#Organism/Name	TaxID	BioProject Accession	BioProject ID	Group	SubGroup	Size (Mb)	GC%	Replicons	WGS	Scaffolds	Genes	Proteins	Release Date	Modify Date	Status	Center	BioSample Accession	Assembly Accession	Reference	FTP Path	Pubmed ID	Strain
Anaeromyxobacter dehalogenans 2CP-C	290397	PRJNA12634	12634	Proteobacteria	delta/epsilon subdivisions	5.01348	74.9	chromosome:NC_007760.1/CP000251.1	-	1	4522	4416	1/27/06	5/18/17	Complete Genome	DOE Joint Genome Institute	SAMN02598274	GCA_000013385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/385/GCA_000013385.1_ASM1338v1	-	2CP-C
Streptomyces rubrolavendulae	285473	PRJNA317020	317020	Terrabacteria group	Actinobacteria	6.54326	74.8	chromosome:NZ_CP017316.1/CP017316.1	-	1	5582	5267	10/3/16	3/13/17	Complete Genome	"National Academy of Agricultural Science, Rural Development Adminstration"	SAMN04595356	GCA_001750785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/785/GCA_001750785.1_ASM175078v1	-	MJM4426
Anaeromyxobacter sp. K	447217	PRJNA19743	19743	Proteobacteria	delta/epsilon subdivisions	5.06163	74.8	chromosome:NC_011145.1/CP001131.1	-	1	4528	4435	8/15/08	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000041	GCA_000020805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/805/GCA_000020805.1_ASM2080v1	-	K
Corynebacterium sphenisci DSM 44792	1437874	PRJNA232092	232092	Terrabacteria group	Actinobacteria	2.5948	74.7	chromosome:NZ_CP009248.1/CP009248.1	-	1	2346	2254	1/10/17	4/17/17	Complete Genome	Bielefeld University	SAMN02996499	GCA_001941505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/505/GCA_001941505.1_ASM194150v1	-	DSM 44792
Cellulomonas fimi ATCC 484	590998	PRJNA33691	33691	Terrabacteria group	Actinobacteria	4.26634	74.7	chromosome:NC_015514.1/CP002666.1	-	1	3851	3752	5/9/11	5/18/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713615	GCA_000212695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/212/695/GCA_000212695.1_ASM21269v1	-	ATCC 484
Anaeromyxobacter dehalogenans 2CP-1	455488	PRJNA20095	20095	Proteobacteria	delta/epsilon subdivisions	5.02933	74.7	chromosome:NC_011891.1/CP001359.1	-	1	4560	4447	1/12/09	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000050	GCA_000022145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/145/GCA_000022145.1_ASM2214v1	-	2CP-1
Cellulosimicrobium sp. TH-20	1980001	PRJNA383054	383054	Terrabacteria group	Actinobacteria	4.26555	74.6	chromosome:NZ_CP020857.1/CP020857.1	-	1	3802	3687	4/24/17	4/26/17	Complete Genome	Changchun University Of Chinese Medicine	SAMN06758758	GCA_002105775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/775/GCA_002105775.1_ASM210577v1	-	TH-20
Pseudonocardia sp. AL041005-10	445576	PRJNA280390	280390	Terrabacteria group	Actinobacteria	6.14334	74.4	chromosome:NZ_CP011862.1/CP011862.1	-	1	5851	4965	9/18/15	4/16/17	Complete Genome	Harvard Medical School	SAMN03460278	GCA_001294605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/605/GCA_001294605.1_ASM129460v1	26438860	AL041005-10
Cellulomonas flavigena DSM 20109	446466	PRJNA19707	19707	Terrabacteria group	Actinobacteria	4.12318	74.3	chromosome:NC_014151.1/CP001964.1	-	1	3738	3629	5/13/10	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598424	GCA_000092865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/865/GCA_000092865.1_ASM9286v1	21304688	DSM 20109
Kineococcus radiotolerans SRS30216 = ATCC BAA-149	266940	PRJNA10689	10689	Terrabacteria group	Actinobacteria	4.95667	74.2104	chromosome:NC_009664.2/CP000750.2; plasmid pKRAD01:NC_009806.1/CP000751.1; plasmid pKRAD02:NC_009660.1/CP000752.1	-	3	4738	4609	7/10/07	5/18/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598259	GCA_000017305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/305/GCA_000017305.1_ASM1730v1	-	SRS30216
Kitasatospora setae KM-6054	452652	PRJDA19951	19951	Terrabacteria group	Actinobacteria	8.78328	74.2	chromosome:NC_016109.1/AP010968.1	-	1	7650	7366	11/12/10	4/8/17	Complete Genome	NITE	SAMD00060928	GCA_000269985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/985/GCA_000269985.1_ASM26998v1	21059706	KM-6054
Cellulosimicrobium cellulans	1710	PRJNA369694	369694	Terrabacteria group	Actinobacteria	4.79986	74.1	chromosome:NZ_CP021383.1/CP021383.1	-	1	4188	3964	5/31/17	6/2/17	Complete Genome	University of Minnesota	SAMN07140349	GCA_002162335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/335/GCA_002162335.1_ASM216233v1	-	PSBB019
Modestobacter marinus	477641	PRJEA82845	82845	Terrabacteria group	Actinobacteria	5.57552	74.1	chromosome:NC_017955.1/FO203431.1	-	1	5314	5134	5/24/12	5/19/17	Complete Genome	CEA-IG Genoscope	SAMEA2272685	GCA_000306785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/785/GCA_000306785.1_ASM30678v1	22887672	BC501
Geodermatophilus obscurus DSM 43160	526225	PRJNA29547	29547	Terrabacteria group	Actinobacteria	5.3225	74	chromosome:NC_013757.1/CP001867.1	-	1	5044	4786	1/20/10	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002612	GCA_000025345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/345/GCA_000025345.1_ASM2534v1	21304698	DSM 43160
Kocuria flava	446860	PRJNA302237	302237	Terrabacteria group	Actinobacteria	3.63834	73.945	chromosome:NZ_CP013254.1/CP013254.1; plasmid 1:NZ_CP013255.1/CP013255.1; plasmid 2:NZ_CP013256.1/CP013256.1; plasmid 3:NZ_CP013257.1/CP013257.1; plasmid 4:NZ_CP013258.1/CP013258.1	-	5	3273	3129	12/24/15	4/16/17	Complete Genome	Hubei University of Technology	SAMN04270876	GCA_001482365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/365/GCA_001482365.1_ASM148236v1	-	HO-9041
Actinosynnema pretiosum	42197	PRJNA407048	407048	Terrabacteria group	Actinobacteria	8.13157	73.9	chromosome:CP023445.1	-	1	7017	6695	9/25/17	9/25/17	Complete Genome	Shandong Academy of Medical Sciences	SAMN07638033	GCA_002354875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/875/GCA_002354875.1_ASM235487v1	-	X47
Isoptericola variabilis 225	743718	PRJNA49657	49657	Terrabacteria group	Actinobacteria	3.30774	73.9	chromosome:NC_015588.1/CP002810.1	-	1	3065	2916	5/26/11	4/7/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713634	GCA_000215105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/105/GCA_000215105.1_ASM21510v1	-	225
Isoptericola dokdonensis DS-3	1300344	PRJNA191953	191953	Terrabacteria group	Actinobacteria	3.82697	73.8	chromosome:NZ_CP014209.1/CP014209.1	-	1	3458	3351	5/3/16	4/17/17	Complete Genome	Yonsei University	SAMN04437027	GCA_001636295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/295/GCA_001636295.1_ASM163629v1	-	DS-3
Cellulomonas gilvus ATCC 13127	593907	PRJNA33853	33853	Terrabacteria group	Actinobacteria	3.52644	73.8	chromosome:NC_015671.1/CP002665.1	-	1	3222	3137	6/15/11	9/4/17	Complete Genome	US DOE Joint Genome Institute	SAMN02232005	GCA_000218545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/545/GCA_000218545.1_ASM21854v1	-	ATCC 13127
Pseudonocardia sp. HH130630-07	1690815	PRJNA290893	290893	Terrabacteria group	Actinobacteria	6.68045	73.7419	chromosome:NZ_CP013854.1/CP013854.1; plasmid pLS2-1:NZ_CP013855.1/CP013855.1; plasmid pLS2-2:NZ_CP013856.1/CP013856.1	-	3	6278	5859	8/2/16	4/13/17	Complete Genome	Harvard Medical School	SAMN03922416	GCA_001698125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/125/GCA_001698125.1_ASM169812v1	-	HH130630-07
Actinosynnema mirum DSM 43827	446462	PRJNA19705	19705	Terrabacteria group	Actinobacteria	8.24814	73.7	chromosome:NC_013093.1/CP001630.1	-	1	7160	6868	8/13/09	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00001904	GCA_000023245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/245/GCA_000023245.1_ASM2324v1	21304636	DSM 43827
Cellulomonas sp. PSBB021	2003551	PRJNA387184	387184	Terrabacteria group	Actinobacteria	3.79419	73.6	chromosome:NZ_CP021430.1/CP021430.1	-	1	3475	3251	8/3/17	8/7/17	Complete Genome	University of Minnesota	SAMN07141654	GCA_002240455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/455/GCA_002240455.1_ASM224045v1	-	PSBB021
Pseudonocardia sp. EC080625-04	1096868	PRJNA274761	274761	Terrabacteria group	Actinobacteria	6.55445	73.5067	chromosome:NZ_CP010989.1/CP010989.1; plasmid pFRP1-1:NZ_CP010990.1/CP010990.1; plasmid pFRP1-2:NZ_CP010991.1/CP010991.1	-	3	6139	5853	9/18/15	4/11/17	Complete Genome	Harvard Medical School	SAMN03324061	GCA_001294425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/425/GCA_001294425.1_ASM129442v1	26438860	EC080625-04
Streptomyces sp. SCSIO 03032	1109743	PRJNA385202	385202	Terrabacteria group	Actinobacteria	6.28798	73.5	chromosome:NZ_CP021121.1/CP021121.1	-	1	5473	5228	5/11/17	5/23/17	Complete Genome	South China Sea Institute of Oceanology	SAMN06883772	GCA_002128305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/305/GCA_002128305.1_ASM212830v1	-	SCSIO 03032
Anaeromyxobacter sp. Fw109-5	404589	PRJNA17729	17729	Proteobacteria	delta/epsilon subdivisions	5.27799	73.5	chromosome:NC_009675.1/CP000769.1	-	1	4662	4482	7/17/07	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598401	GCA_000017505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/505/GCA_000017505.1_ASM1750v1	25614562	Fw109-5
Pseudomonas putida	303	PRJNA236584	236584	Proteobacteria	Gammaproteobacteria	5.87875	62.3	-	JBOP01	7	5415	5225	12/10/14	4/2/17	Scaffold	CNRS - UPR2355	SAMN03198226	GCA_000800615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/615/GCA_000800615.1_PseuPA14H7	25635023	PA14H7
Pseudonocardia sp. HH130629-09	1641402	PRJNA280814	280814	Terrabacteria group	Actinobacteria	6.30098	73.4732	chromosome:NZ_CP011868.1/CP011868.1; plasmid pLS1-1:NZ_CP011869.1/CP011869.1	-	2	5925	5423	9/18/15	4/11/17	Complete Genome	Harvard Medical School	SAMN03470467	GCA_001294645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/645/GCA_001294645.1_ASM129464v1	26438860	HH130629-09
Streptomyces sampsonii	42239	PRJNA336086	336086	Terrabacteria group	Actinobacteria	7.07033	73.4	chromosome:NZ_CP016824.1/CP016824.1	-	1	6150	5909	8/12/16	3/14/17	Complete Genome	Sichuan Agricultural University	SAMN04338613	GCA_001704195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/195/GCA_001704195.1_ASM170419v1	-	KJ40
Pseudonocardia sp. EC080610-09	1688404	PRJNA290343	290343	Terrabacteria group	Actinobacteria	7.13185	73.3468	chromosome:NZ_CP012181.1/CP012181.1; plasmid pBCI2-1:NZ_CP012182.1/CP012182.1; plasmid pBCI2-2:NZ_CP012183.1/CP012183.1	-	3	6601	6313	10/30/15	4/11/17	Complete Genome	Harvard Medical School	SAMN03890604	GCA_001420975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/975/GCA_001420975.1_ASM142097v1	26535611	EC080610-09
Streptomyces sp. FR-008	206662	PRJNA264353	264353	Terrabacteria group	Actinobacteria	7.25803	73.3177	chromosome:NZ_CP009802.1/CP009802.1; plasmid pSSFR1:NZ_CP009803.1/CP009803.1; plasmid pSSFR2:NZ_CP009804.1/CP009804.1	-	3	6345	5949	11/4/15	3/12/17	Complete Genome	"Key Laboratory of Combinatorial Biosynthesis andKey Laboratory of Combinatorial Biosynthesis and Drug Discovery (Wuhan University), Ministry of Education ,and Wuhan University School of Pharmaceutical Sciences"	SAMN03120580	GCA_001431765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/765/GCA_001431765.1_ASM143176v1	-	FR-008
Streptomyces albus	1888	PRJNA295319	295319	Terrabacteria group	Actinobacteria	7.1705	73.3	chromosome:NZ_CP014485.1/CP014485.1	-	1	6295	6027	2/29/16	3/12/17	Complete Genome	University of Minnesota	SAMN04053756	GCA_001577385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/385/GCA_001577385.1_ASM157738v1	27081146	SM254
Streptomyces albus J1074	457425	PRJNA180996	180996	Terrabacteria group	Actinobacteria	6.84165	73.3	chromosome:NC_020990.1/CP004370.1	-	1	5984	5796	4/9/13	5/19/17	Complete Genome	HIPS/LNU	SAMN02603310	GCA_000359525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/525/GCA_000359525.1_ASM35952v1	24495463	J1074
Pseudonocardia sp. EC080619-01	1096856	PRJNA290345	290345	Terrabacteria group	Actinobacteria	7.20593	73.2965	chromosome:NZ_CP012184.1/CP012184.1; plasmid pBCI1-1:NZ_CP012186.1/CP012186.1; plasmid pBCI1-2:NZ_CP012185.1/CP012185.1	-	3	6692	6395	10/30/15	4/11/17	Complete Genome	Harvard Medical School	SAMN03890614	GCA_001420995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/995/GCA_001420995.1_ASM142099v1	26535611	EC080619-01
Streptomyces sp. CLI2509	1984801	PRJNA384988	384988	Terrabacteria group	Actinobacteria	7.2327	73.2582	chromosome:NZ_CP021118.1/CP021118.1; plasmid unnamed1:NZ_CP021119.1/CP021119.1	-	2	6250	5833	9/8/17	9/11/17	Complete Genome	Harvard Medical School	SAMN06855397	GCA_002288075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/075/GCA_002288075.1_ASM228807v1	-	CLI2905
Phycisphaera mikurensis NBRC 102666	1142394	PRJDB46	82987	PVC group	Planctomycetes	3.88438	73.2311	chromosome:NC_017080.1/AP012338.1; plasmid pPSMK1:NC_017081.1/AP012339.1	-	2	3157	3060	3/29/12	4/17/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00061032	GCA_000284115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/115/GCA_000284115.1_ASM28411v1	-	NBRC 102666
Pseudonocardia dioxanivorans CB1190	675635	PRJNA40557	40557	Terrabacteria group	Actinobacteria	7.30399	73.2078	chromosome:NC_015312.1/CP002593.1; plasmid pPSED01:NC_015314.1/CP002594.1; plasmid pPSED03:NC_015313.1/CP002598.1	-	3	6899	6684	3/28/11	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713596	GCA_000196675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/675/GCA_000196675.1_ASM19667v1	21725009	CB1190
Streptomyces sp. SAT1	1849967	PRJNA321638	321638	Terrabacteria group	Actinobacteria	7.47253	73.2	chromosome:NZ_CP015849.1/CP015849.1	-	1	6483	6151	6/2/16	3/14/17	Complete Genome	Beijing Forestry University	SAMN05161780	GCA_001654495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/654/495/GCA_001654495.1_ASM165449v1	-	SAT1
Clavibacter michiganensis subsp. capsici	1874630	PRJNA290692	290692	Terrabacteria group	Actinobacteria	3.24171	73.1911	chromosome:NZ_CP012573.1/CP012573.1; plasmid pCM1:NZ_CP012574.1/CP012574.1; plasmid pCM2:NZ_CP012575.1/CP012575.1	-	3	3098	2958	9/8/15	4/4/17	Complete Genome	Kyung Hee University	SAMN03896004	GCA_001280205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/205/GCA_001280205.1_ASM128020v1	-	PF008
Streptomyces xinghaiensis S187	1038929	PRJNA67543	67543	Terrabacteria group	Actinobacteria	7.13789	73.1	chromosome:NZ_CP023202.1/CP023202.1	-	1	6146	5784	9/5/17	9/14/17	Complete Genome	"School of Life Science and Biotechnology, Dalian University of Technology"	SAMN02469701	GCA_000220705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/705/GCA_000220705.2_ASM22070v2	21914869	S187
Streptomyces sp. CNQ-509	444103	PRJNA284218	284218	Terrabacteria group	Actinobacteria	8.03933	73.1	chromosome:NZ_CP011492.1/CP011492.1	-	1	6993	6559	5/20/15	3/11/17	Complete Genome	University of Tuebingen	SAMN03699827	GCA_001011035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/035/GCA_001011035.1_ASM101103v1	-	CNQ-509
Beutenbergia cavernae DSM 12333	471853	PRJNA20827	20827	Terrabacteria group	Actinobacteria	4.66918	73.1	chromosome:NC_012669.1/CP001618.1	-	1	4282	4165	5/7/09	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598436	GCA_000023105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/105/GCA_000023105.1_ASM2310v1	21304633	DSM 12333
Clavibacter michiganensis subsp. nebraskensis NCPPB 2581	1097677	PRJEA74519	74519	Terrabacteria group	Actinobacteria	3.0636	73	chromosome:NC_020891.1/HE614873.1	-	1	2914	2801	4/1/13	3/31/17	Complete Genome	"Department of Microbiology, University of Bielefeld"	SAMEA2271949	GCA_000355695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/695/GCA_000355695.1_ASM35569v1	-	type strain: NCPPB 2581
Micrococcus luteus NCTC 2665	465515	PRJNA20655	20655	Terrabacteria group	Actinobacteria	2.5011	73	chromosome:NC_012803.1/CP001628.1	-	1	2327	2215	6/12/09	4/10/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000281	GCA_000023205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/205/GCA_000023205.1_ASM2320v1	-	NCTC 2665
Streptomyces cattleya NRRL 8057 = DSM 46488	1003195	PRJNA78941	78941	Terrabacteria group	Actinobacteria	8.09552	72.9896	chromosome:NC_017586.1/CP003219.1; plasmid pSCATT:NC_017585.1/CP003229.1	-	2	7340	7080	12/27/11	5/19/17	Complete Genome	"State Key Laboratory of Microbial Metabolism, Shanghai Jiaotong University"	SAMN02603879	GCA_000240165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/165/GCA_000240165.1_ASM24016v1	-	DSM 46488
Streptomyces cattleya NRRL 8057 = DSM 46488	1003195	PRJNA65103	65103	Terrabacteria group	Actinobacteria	8.09255	72.9894	chromosome:NC_016111.1/FQ859185.1; plasmid pSCAT:NC_016113.1/FQ859184.1	-	2	7335	7089	6/23/11	5/19/17	Complete Genome	CEA/Genoscope	SAMEA3138404	GCA_000237305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/305/GCA_000237305.1_ASM23730v1	21868806	NRRL 8057
Streptomyces glaucescens	1907	PRJNA260814	260814	Terrabacteria group	Actinobacteria	7.62377	72.9127	chromosome:NZ_CP009438.1/CP009438.1; plasmid pSglau1:NZ_CP009439.1/CP009439.1	-	2	6668	6364	10/1/14	3/11/17	Complete Genome	Bielefeld University	SAMN03031338	GCA_000761215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/215/GCA_000761215.1_ASM76121v1	-	GLA.O
Plantactinospora sp. KBS50	2024580	PRJNA396887	396887	Terrabacteria group	Actinobacteria	6.68973	72.9	chromosome:NZ_CP022961.1/CP022961.1	-	1	5799	5196	9/5/17	9/7/17	Complete Genome	Sarawak Biodiversity Centre	SAMN07440307	GCA_002285795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/795/GCA_002285795.1_ASM228579v1	-	KBS50
Streptomyces cyaneogriseus subsp. noncyanogenus	477245	PRJNA274645	274645	Terrabacteria group	Actinobacteria	7.7624	72.9	chromosome:NZ_CP010849.1/CP010849.1	-	1	6654	6243	2/23/15	3/11/17	Complete Genome	Northeast Agricultural University	SAMN03329629	GCA_000931445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/445/GCA_000931445.1_ASM93144v1	-	NMWT 1
Pimelobacter simplex	2045	PRJNA259593	259593	Terrabacteria group	Actinobacteria	5.63736	72.9	chromosome:NZ_CP009896.1/CP009896.1	-	1	5519	5404	11/19/14	4/10/17	Complete Genome	G.K.Skryabin Institute of Biochemistry and Physiology of Microorganisms Russian Academy of Sciences	SAMN03009415	GCA_000785495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/495/GCA_000785495.1_ASM78549v1	25573942	VKM Ac-2033D
Blastococcus saxobsidens DD2	1146883	PRJEA82915	82915	Terrabacteria group	Actinobacteria	4.87534	72.9	chromosome:NC_016943.1/FO117623.1	-	1	4646	4481	2/28/12	5/18/17	Complete Genome	CEA-IG-Genoscope	SAMEA2272314	GCA_000284015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/015/GCA_000284015.1_ASM28401v1	22535935	DD2
Streptomyces albireticuli	1940	PRJNA383953	383953	Terrabacteria group	Actinobacteria	8.14442	72.8	chromosome:NZ_CP021744.1/CP021744.1	-	1	6931	6550	6/13/17	6/15/17	Complete Genome	Shandong Agricultural University	SAMN06820531	GCA_002192455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/455/GCA_002192455.1_ASM219245v1	-	MDJK11
Micromonospora sp. L5	648999	PRJNA38291	38291	Terrabacteria group	Actinobacteria	6.96253	72.8	chromosome:NC_014815.1/CP002399.1	-	1	6270	6097	12/22/10	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00008473	GCA_000177655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/655/GCA_000177655.2_ASM17765v2	24072863	L5
Micromonospora aurantiaca ATCC 27029	644283	PRJNA37957	37957	Terrabacteria group	Actinobacteria	7.02556	72.8	chromosome:NC_014391.1/CP002162.1	-	1	6337	6177	8/11/10	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00006196	GCA_000145235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/235/GCA_000145235.1_ASM14523v1	-	ATCC 27029
Frankia alni ACN14a	326424	PRJNA17403	17403	Terrabacteria group	Actinobacteria	7.49793	72.8	chromosome:NC_008278.1/CT573213.2	-	1	6107	5807	8/3/06	5/18/17	Complete Genome	Genoscope	SAMEA3138259	GCA_000058485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/058/485/GCA_000058485.1_ASM5848v1	17151343	ACN14A
Streptomyces parvulus	146923	PRJNA320204	320204	Terrabacteria group	Actinobacteria	7.76653	72.7285	chromosome:NZ_CP015866.1/CP015866.1; plasmid pSPA1:NZ_CP015867.1/CP015867.1	-	2	6992	6781	6/8/16	3/14/17	Complete Genome	Ibaraki University College of Agriculture	SAMN04924834	GCA_001660045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/045/GCA_001660045.1_ASM166004v1	-	2297
Streptomyces leeuwenhoekii	1437453	PRJEB8583	284471	Terrabacteria group	Actinobacteria	8.12249	72.7113	chromosome chromosome:NZ_LN831790.1/LN831790.1; plasmid pSLE1:NZ_LN831788.1/LN831788.1; plasmid pSLE2:NZ_LN831789.1/LN831789.1	-	3	7070	6663	5/21/15	3/14/17	Complete Genome	JIC	SAMEA3258058	GCA_001013905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/013/905/GCA_001013905.1_sleC34	-	C34 (= DSM 42122 = NRRL B-24963)
Streptomyces reticuli	1926	PRJEB10869	308091	Terrabacteria group	Actinobacteria	9.33622	72.7057	chromosome I:NZ_LN997842.1/LN997842.1; plasmid II:NZ_LN997843.1/LN997843.1; plasmid III:NZ_LN997844.1/LN997844.1; plasmid IV:NZ_LN997845.1/LN997845.1	-	4	8262	7860	1/7/16	3/12/17	Complete Genome	CEBITEC	SAMEA3707210	GCA_001511815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/815/GCA_001511815.1_TUE45	-	-
Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111	446468	PRJNA19709	19709	Terrabacteria group	Actinobacteria	6.54331	72.7052	chromosome 1:NC_014210.1/CP002040.1; chromosome 2:NC_014211.1/CP002041.1	-	2	5576	5396	5/26/10	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598425	GCA_000092985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/985/GCA_000092985.1_ASM9298v1	21304737	DSM 43111
Streptomyces violaceoruber	1935	PRJNA374467	374467	Terrabacteria group	Actinobacteria	7.91605	72.7	chromosome:NZ_CP020570.1/CP020570.1	-	1	6858	6573	4/10/17	4/13/17	Complete Genome	Shandong Academy of Medical Sciences	SAMN06323808	GCA_002082175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/175/GCA_002082175.1_ASM208217v1	-	S21
Nocardiopsis dassonvillei	2014	PRJNA322426	322426	Terrabacteria group	Actinobacteria	6.58544	72.7	chromosome:NZ_CP017965.1/CP017965.1	-	1	5597	5441	11/14/16	4/16/17	Complete Genome	NOCA502F	SAMN05162553	GCA_001877055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/055/GCA_001877055.1_ASM187705v1	-	NOCA502F
Arsenicicoccus sp. oral taxon 190	1658671	PRJNA282954	282954	Terrabacteria group	Actinobacteria	3.52527	72.7	chromosome 1:NZ_CP012070.1/CP012070.1	-	1	3282	3139	7/31/15	4/10/17	Complete Genome	The Forsyth Institute	SAMN03704031	GCA_001189535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/535/GCA_001189535.1_ASM118953v1	-	F0371
Conexibacter woesei DSM 14684	469383	PRJNA20745	20745	Terrabacteria group	Actinobacteria	6.35937	72.7	chromosome:NC_013739.1/CP001854.1	-	1	5965	5868	1/15/10	4/6/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002582	GCA_000025265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/265/GCA_000025265.1_ASM2526v1	21304704	DSM 14684
Clavibacter michiganensis subsp. insidiosus	33014	PRJNA277880	277880	Terrabacteria group	Actinobacteria	3.40806	72.6425	chromosome:NZ_CP011043.1/CP011043.1; plasmid pCI1:NZ_CP011044.1/CP011044.1; plasmid pCI2:NZ_CP011045.1/CP011045.1; plasmid pCI3:NZ_CP011046.1/CP011046.1	-	4	3274	3082	3/20/15	4/3/17	Complete Genome	"University of Minnesota, Twin Cities"	SAMN03397809	GCA_000958465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/465/GCA_000958465.1_ASM95846v1	25953184	R1-1
Gemmatirosa kalamazoonesis	861299	PRJNA194094	194094	FCB group	Gemmatimonadetes	7.47921	72.6409	chromosome:CP007128.1; chromosome ECE:CP007127.1; plasmid 1:CP007129.1; plasmid 2:CP007130.1	-	4	6423	6369	1/22/14	8/26/15	Complete Genome	University of Tennessee	SAMN02641636	GCA_000522985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/985/GCA_000522985.1_ASM52298v1	-	KBS708
Streptomyces clavuligerus	1901	PRJNA329150	329150	Terrabacteria group	Actinobacteria	7.59076	72.6162	chromosome:NZ_CP016559.1/CP016559.1; plasmid pSCL4:NZ_CP016560.1/CP016560.1	-	2	6353	6168	7/26/16	3/13/17	Complete Genome	Shandong Jianzhu University	SAMN05392246	GCA_001693675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/675/GCA_001693675.1_ASM169367v1	-	F613-1
Nocardiopsis dassonvillei	2014	PRJNA394048	394048	Terrabacteria group	Actinobacteria	6.64164	72.6	chromosome:NZ_CP022434.1/CP022434.1	-	1	5588	5434	8/21/17	8/23/17	Complete Genome	Hangzhou Normal University	SAMN07347491	GCA_002260685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/685/GCA_002260685.1_ASM226068v1	-	HZNU_N_1
Streptomyces albus	1888	PRJNA316158	316158	Terrabacteria group	Actinobacteria	8.30843	72.6	chromosome:NZ_CP016825.1/CP016825.1	-	1	6856	6512	10/6/16	3/14/17	Complete Genome	Shanghai Jiao Tong University	SAMN04577683	GCA_001753425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/425/GCA_001753425.1_ASM175342v1	-	BK3-25
Actinomyces radicidentis	111015	PRJNA282954	282954	Terrabacteria group	Actinobacteria	3.05161	72.6	chromosome:NZ_CP014228.1/CP014228.1	-	1	2604	2437	2/9/16	4/17/17	Complete Genome	The Forsyth Institute	SAMN04435863	GCA_001553565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/565/GCA_001553565.1_ASM155356v1	-	CCUG 36733
Streptomyces albus	1888	PRJNA271625	271625	Terrabacteria group	Actinobacteria	8.38467	72.6	chromosome:NZ_CP010519.1/CP010519.1	-	1	6893	6549	1/21/15	3/11/17	Complete Genome	Shanghai Jiao Tong University	SAMN03283748	GCA_000827005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/827/005/GCA_000827005.1_ASM82700v1	-	DSM 41398
Kitasatospora aureofaciens	1894	PRJNA381130	381130	Terrabacteria group	Actinobacteria	7.0764	72.5501	chromosome:NZ_CP020567.1/CP020567.1; plasmid unnamed1:NZ_CP020568.1/CP020568.1	-	2	6226	5869	4/10/17	4/17/17	Complete Genome	"1. School of Pharmacy, Fudan University 2.Shanghai Institute of Pharmaceutical Industry "	SAMN06670791	GCA_002082605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/605/GCA_002082605.1_ASM208260v1	-	DM-1
Streptomyces collinus Tu 365	1214242	PRJNA171216	171216	Terrabacteria group	Actinobacteria	8.37729	72.5501	chromosome:NC_021985.1/CP006259.1; plasmid pSCO1:NC_022001.1/CP006260.1; plasmid pSCO2:NC_021986.1/CP006261.1	-	3	7324	6985	8/6/13	3/9/17	Complete Genome	Bielefeld University	SAMN02603029	GCA_000444875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/875/GCA_000444875.1_ASM44487v1	24140291	Tu 365
Clavibacter michiganensis subsp. michiganensis NCPPB 382	443906	PRJNA19643	19643	Terrabacteria group	Actinobacteria	3.39524	72.5311	chromosome:NC_009480.1/AM711867.1; plasmid pCM1:NC_009478.1/AM711865.1; plasmid pCM2:NC_009479.1/AM711866.1	-	3	3202	3114	5/18/07	3/30/17	Complete Genome	"Center For Biotechnology, Bielefeld University, Germany"	SAMEA3138263	GCA_000063485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/063/485/GCA_000063485.1_ASM6348v1	18192381	NCPPB 382
Streptomyces sp. fd1-xmd	1812480	PRJNA374669	374669	Terrabacteria group	Actinobacteria	7.93	72.5	chromosome:NZ_CP019798.1/CP019798.1	-	1	7092	6751	2/28/17	3/3/17	Complete Genome	Fudan University	SAMN06329945	GCA_002007685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/685/GCA_002007685.1_ASM200768v1	-	fd1-xmd
Thermaerobacter marianensis DSM 12885	644966	PRJNA38025	38025	Terrabacteria group	Firmicutes	2.8447	72.5	chromosome:NC_014831.1/CP002344.1	-	1	2427	2302	12/29/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713570	GCA_000184705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/184/705/GCA_000184705.1_ASM18470v1	21304738	DSM 12885
Xylanimonas cellulosilytica DSM 15894	446471	PRJNA19715	19715	Terrabacteria group	Actinobacteria	3.83138	72.4653	chromosome:NC_013530.1/CP001821.1; plasmid pXCEL01:NC_013531.1/CP001822.1	-	2	3501	3397	11/20/09	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002456	GCA_000024965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/965/GCA_000024965.1_ASM2496v1	21304672	DSM 15894
Streptomyces venezuelae	54571	PRJNA353366	353366	Terrabacteria group	Actinobacteria	8.38032	72.4547	chromosome:NZ_CP018074.1/CP018074.1; plasmid unnamed:NZ_CP018075.1/CP018075.1	-	2	7604	7343	11/28/16	3/14/17	Complete Genome	John Innes Centre	SAMN06014621	GCA_001886595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/595/GCA_001886595.1_ASM188659v1	-	NRRL B-65442
Clavibacter michiganensis subsp. sepedonicus	31964	PRJNA184	184	Terrabacteria group	Actinobacteria	3.40379	72.4187	chromosome:NC_010407.1/AM849034.1; plasmid pCS1:NC_010399.1/AM849035.1; plasmid pCSL1:NC_010408.1/AM849036.1	-	3	3258	3067	2/12/08	5/28/17	Complete Genome	Sanger Institute	SAMEA1705948	GCA_000069225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/069/225/GCA_000069225.1_ASM6922v1	18192393	ATCC33113
Streptomyces pactum	68249	PRJNA331053	331053	Terrabacteria group	Actinobacteria	8.18026	72.4	chromosome:NZ_CP016795.1/CP016795.1	-	1	7186	6475	10/18/16	3/14/17	Complete Genome	Jiangsu Normal University	SAMN05436714	GCA_001767375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/375/GCA_001767375.1_ASM176737v1	-	KLBMP 5084
Serinicoccus sp. JLT9	1758689	PRJNA316485	316485	Terrabacteria group	Actinobacteria	3.59739	72.4	chromosome:NZ_CP014989.1/CP014989.1	-	1	3394	3265	7/15/16	4/13/17	Complete Genome	MEL	SAMN04578256	GCA_001685415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/415/GCA_001685415.1_ASM168541v1	-	JLT9
Thermobispora bispora DSM 43833	469371	PRJNA20737	20737	Terrabacteria group	Actinobacteria	4.18998	72.4	chromosome:NC_014165.1/CP001874.1	-	1	3591	3462	5/17/10	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002587	GCA_000092645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/645/GCA_000092645.1_ASM9264v1	21304716	DSM 43833
Streptomyces sp. TN58	234612	PRJNA354687	354687	Terrabacteria group	Actinobacteria	7.58503	72.3	chromosome:NZ_CP018870.1/CP018870.1	-	1	6887	6529	1/10/17	3/15/17	Complete Genome	Institute for Integrative Biology of the Cell (I2BC)	SAMN06167403	GCA_001941845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/845/GCA_001941845.1_ASM194184v1	-	TN58
Nocardioides dokdonensis FR1436	1300347	PRJNA191956	191956	Terrabacteria group	Actinobacteria	4.37671	72.3	chromosome:NZ_CP015079.1/CP015079.1	-	1	4129	4012	5/27/16	4/17/17	Complete Genome	Yonsei University	SAMN04606834	GCA_001653335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/335/GCA_001653335.1_ASM165333v1	-	FR1436
Streptomyces ambofaciens	1889	PRJNA298666	298666	Terrabacteria group	Actinobacteria	8.13788	72.3	chromosome:NZ_CP012949.1/CP012949.1	-	1	7282	6915	4/27/16	3/14/17	Complete Genome	Universite de Lorraine	SAMN04160834	GCA_001632865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/865/GCA_001632865.1_ASM163286v1	27257195	DSM 40697
Streptomyces laurentii	39478	PRJDB4674	317632	Terrabacteria group	Actinobacteria	8.03266	72.3	chromosome:AP017424.1	-	1	7542	7452	4/20/16	6/9/16	Complete Genome	"Microbial Genetics, Institute of Genetic Resources, Faculty of Agriculture, Kyushu University"	SAMD00050872	GCA_002355495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/495/GCA_002355495.1_ASM235549v1	-	ATCC 31255
Streptomyces sp. 4F	1751294	PRJNA301391	301391	Terrabacteria group	Actinobacteria	8.04777	72.3	chromosome:NZ_CP013142.1/CP013142.1	-	1	7216	6813	1/4/16	3/12/17	Complete Genome	"Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, CAS"	SAMN04245816	GCA_001484705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/705/GCA_001484705.1_ASM148470v1	-	4F
Frankia inefficax	298654	PRJNA37913	37913	Terrabacteria group	Actinobacteria	8.81578	72.3	chromosome:NC_014666.1/CP002299.1	-	1	7195	6972	11/5/10	9/3/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02232023	GCA_000166135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/135/GCA_000166135.1_ASM16613v1	-	EuI1c
Streptomyces albulus	68570	PRJNA242787	242787	Terrabacteria group	Actinobacteria	9.3724	72.2986	chromosome:NZ_CP007574.1/CP007574.1; plasmid pNKL:NZ_CP007575.1/CP007575.1	-	2	8159	7566	5/20/14	3/9/17	Complete Genome	Nankai University	SAMN02709029	GCA_000695235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/235/GCA_000695235.1_ASM69523v1	24926050	NK660
Streptomyces sp. S8	1837283	PRJNA318942	318942	Terrabacteria group	Actinobacteria	7.60186	72.2818	chromosome:NZ_CP015362.1/CP015362.1; plasmid unnamed:NZ_CP015446.1/CP015446.1	-	2	6537	6233	4/18/17	4/21/17	Complete Genome	GyeongsangNational University	SAMN04870419	GCA_002094995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/995/GCA_002094995.1_ASM209499v1	-	S8
Streptomyces lydicus	47763	PRJNA341548	341548	Terrabacteria group	Actinobacteria	8.20136	72.2	chromosome:NZ_CP017157.1/CP017157.1	-	1	7262	6942	9/16/16	3/13/17	Complete Genome	Tianjin University	SAMN05725998	GCA_001729485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/485/GCA_001729485.1_ASM172948v1	-	103
Streptomyces lividans TK24	457428	PRJNA257077	257077	Terrabacteria group	Actinobacteria	8.34528	72.2	chromosome:NZ_CP009124.1/CP009124.1	-	1	7703	7413	8/12/14	3/12/17	Complete Genome	StrepSynth	SAMN02947304	GCA_000739105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/105/GCA_000739105.1_ASM73910v1	-	TK24
Saccharothrix espanaensis DSM 44229	1179773	PRJEB28	183921	Terrabacteria group	Actinobacteria	9.36065	72.2	chromosome:NC_019673.1/HE804045.1	-	1	8408	8083	10/2/12	5/19/17	Complete Genome	"CeBiTec, Technology Platform Genomics"	SAMEA2272236	GCA_000328705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/705/GCA_000328705.1_ASM32870v1	22958348	type strain: DSM 44229
Magnetospirillum magnetotacticum MS-1	272627	PRJNA272834	272834	Proteobacteria	Alphaproteobacteria	4.52393	63.6	-	JXSL01	36	4213	4077	1/28/15	4/10/17	Contig	California Institute of Technology	SAMN03287305	GCA_000829825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/825/GCA_000829825.1_ASM82982v1	25838488	MS-1
Streptomyces griseus subsp. griseus NBRC 13350	455632	PRJDA20085	20085	Terrabacteria group	Actinobacteria	8.54593	72.2	chromosome:NC_010572.1/AP009493.1	-	1	7241	6984	4/9/08	3/9/17	Complete Genome	The University of Tokyo	SAMD00060929	GCA_000010605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/605/GCA_000010605.1_ASM1060v1	"183,100,361,836,435,000,000,000"	NBRC 13350
Streptomyces sp. Mg1	465541	PRJNA207881	207881	Terrabacteria group	Actinobacteria	8.71619	72.171	chromosome 1:NZ_CP011664.1/CP011664.1; plasmid pSMg1-1:NZ_CP011665.1/CP011665.1; plasmid pSMg1-2:NZ_CP011666.1/CP011666.1; plasmid pSMg1-3:NZ_CP011667.1/CP011667.1	-	4	7811	7393	6/9/15	3/11/17	Complete Genome	Texas A&M University	SAMN02471086	GCA_000412265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/265/GCA_000412265.2_ASM41226v2	23908282	Mg1
Streptomyces ambofaciens ATCC 23877	278992	PRJNA93	93	Terrabacteria group	Actinobacteria	8.3936	72.168	chromosome:NZ_CP012382.1/CP012382.1; plasmid pSAM1:NZ_CP012383.1/CP012383.1	-	2	7639	7228	8/17/15	3/12/17	Complete Genome	"Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Universite Paris-Sud, France"	SAMN03921868	GCA_001267885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/885/GCA_001267885.1_ASM126788v1	-	ATCC 23877
Streptomyces sp. Sge12	1972846	PRJNA380743	380743	Terrabacteria group	Actinobacteria	8.1107	72.164	chromosome:NZ_CP020555.1/CP020555.1; plasmid pSGE:NZ_CP020556.1/CP020556.1	-	2	7301	6989	4/6/17	4/8/17	Complete Genome	Shanghai Jiao Tong University	SAMN06647473	GCA_002080455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/455/GCA_002080455.1_ASM208045v1	-	Sge12
Streptomyces alboflavus	67267	PRJNA388234	388234	Terrabacteria group	Actinobacteria	9.62242	72.1	chromosome:NZ_CP021748.1/CP021748.1	-	1	8379	7285	6/12/17	6/14/17	Complete Genome	Shandong Agricultural University	SAMN07173524	GCA_002189675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/675/GCA_002189675.1_ASM218967v1	-	MDJK44
Streptomyces pactum	68249	PRJNA374492	374492	Terrabacteria group	Actinobacteria	8.55079	72.1	chromosome:NZ_CP019724.1/CP019724.1	-	1	7392	6934	2/21/17	3/14/17	Complete Genome	Northwest A&F Unversity	SAMN04002534	GCA_002005225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/225/GCA_002005225.1_ASM200522v1	-	ACT12
Streptomyces silaceus	545123	PRJNA320684	320684	Terrabacteria group	Actinobacteria	8.62587	72.1	chromosome:NZ_CP015588.1/CP015588.1	-	1	7539	7082	1/30/17	3/15/17	Complete Genome	Hebei Agricultural University	SAMN04955000	GCA_001975025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/025/GCA_001975025.1_ASM197502v1	-	ACCC40021
Aeromicrobium erythreum	2041	PRJNA284384	284384	Terrabacteria group	Actinobacteria	3.62924	72.1	chromosome:NZ_CP011502.1/CP011502.1	-	1	3452	3348	1/8/16	4/16/17	Complete Genome	NCSU	SAMN03701813	GCA_001509405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/405/GCA_001509405.1_ASM150940v1	"188,371,227,103,725"	AR18
Streptomyces albulus ZPM	1434306	PRJNA224122	224122	Terrabacteria group	Actinobacteria	9.78458	72.1	chromosome:NZ_CP006871.1/CP006871.1	-	1	8557	8058	3/26/15	3/14/17	Complete Genome	"department of life, USTC"	SAMN03445854	GCA_000963515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/515/GCA_000963515.1_ASM96351v1	25776564	ZPM
Streptomyces sp. CCM_MD2014	1561022	PRJNA263735	263735	Terrabacteria group	Actinobacteria	8.27404	72.1	chromosome:NZ_CP009754.1/CP009754.1	-	1	7532	7203	11/5/14	3/11/17	Complete Genome	Auburn University	SAMN03106103	GCA_000772045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/045/GCA_000772045.1_ASM77204v1	26722012	CCM_MD2014
Sorangium cellulosum So0157-2	1254432	PRJNA179502	179502	Proteobacteria	delta/epsilon subdivisions	14.7821	72.1	chromosome:NC_021658.1/CP003969.1	-	1	11021	10500	7/5/13	4/2/17	Complete Genome	Shandong University	SAMN02603858	GCA_000418325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/325/GCA_000418325.1_ASM41832v1	23812535	So0157-2
Streptomyces sp. CFMR 7	1649184	PRJNA282459	282459	Terrabacteria group	Actinobacteria	8.30728	72.0748	chromosome:NZ_CP011522.1/CP011522.1; plasmid unnamed:NZ_CP011523.1/CP011523.1	-	2	7093	6829	9/2/15	3/11/17	Complete Genome	University Science Malaysia	SAMN03463183	GCA_001278095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/095/GCA_001278095.1_ASM127809v1	-	CFMR-7
Streptomyces vietnamensis	362257	PRJNA244969	244969	Terrabacteria group	Actinobacteria	9.15378	72.0029	chromosome:NZ_CP010407.1/CP010407.1; plasmid pSVL1:NZ_CP010408.1/CP010408.1	-	2	8275	7878	1/29/15	3/11/17	Complete Genome	Guangdong Institute of Microbiology	SAMN02730132	GCA_000830005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/005/GCA_000830005.1_ASM83000v1	-	GIM4.0001
Streptomyces sp. MOE7	1961713	PRJNA368919	368919	Terrabacteria group	Actinobacteria	8.39951	72	chromosome:NZ_CP019779.1/CP019779.1	-	1	7379	6833	4/13/17	6/23/17	Complete Genome	University of Missouri Columbia	SAMN06271910	GCA_002090335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/335/GCA_002090335.1_ASM209033v1	-	MOE7
Kitasatospora albolonga	68173	PRJNA381279	381279	Terrabacteria group	Actinobacteria	8.02779	72	chromosome:NZ_CP020563.1/CP020563.1	-	1	6980	6712	4/10/17	4/17/17	Complete Genome	school of medicine	SAMN06673333	GCA_002082585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/585/GCA_002082585.1_ASM208258v1	-	YIM 101047
Streptomyces lydicus	47763	PRJNA363007	363007	Terrabacteria group	Actinobacteria	8.24318	72	chromosome:NZ_CP019457.1/CP019457.1	-	1	7284	6972	2/3/17	3/15/17	Complete Genome	University of Minnesota	SAMN06251699	GCA_001984445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/445/GCA_001984445.1_ASM198444v1	-	GS93
Streptomyces xiamenensis	408015	PRJNA73797	73797	Terrabacteria group	Actinobacteria	5.9614	72	chromosome:NZ_CP009922.2/CP009922.2	-	1	5405	5119	5/7/15	3/11/17	Complete Genome	Shanghai Jiao Tong University	SAMN03332981	GCA_000993785.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/785/GCA_000993785.2_ASM99378v2	-	318
Sandaracinus amylolyticus	927083	PRJNA242472	242472	Proteobacteria	delta/epsilon subdivisions	10.3273	72	chromosome:NZ_CP011125.1/CP011125.1	-	1	8708	8521	5/1/15	4/16/17	Complete Genome	IMTECH-CSIR	SAMN02719577	GCA_000737325.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/325/GCA_000737325.2_ASM73732v2	-	DSM 53668
Curtobacterium sp. MR_MD2014	1561023	PRJNA263736	263736	Terrabacteria group	Actinobacteria	3.4438	72	chromosome:NZ_CP009755.1/CP009755.1	-	1	3219	3119	11/5/14	4/9/17	Complete Genome	Auburn University	SAMN03106104	GCA_000772085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/085/GCA_000772085.1_ASM77208v1	26722011	MR_MD2014
Brachybacterium faecium DSM 4810	446465	PRJNA17026	17026	Terrabacteria group	Actinobacteria	3.61499	72	chromosome:NC_013172.1/CP001643.1	-	1	3191	3068	8/25/09	8/3/16	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002685	GCA_000023405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/405/GCA_000023405.1_ASM2340v1	21304631	DSM 4810
Streptomyces coelicolor A3(2)	100226	PRJNA242	242	Terrabacteria group	Actinobacteria	9.05485	71.982	chromosome:NC_003888.3/AL645882.2; plasmid SCP1:NC_003903.1/AL589148.1; plasmid SCP2:NC_003904.1/AL645771.1	-	3	8299	8152	5/28/02	8/3/16	Complete Genome	Sanger Institute	SAMEA1705940	GCA_000203835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/203/835/GCA_000203835.1_ASM20383v1	"88,434,361,200,095,300,000,000"	A3(2)
Faecalibacterium prausnitzii A2-165	411483	PRJNA18199	18199	Terrabacteria group	Firmicutes	3.09035	56.3	-	ACOP02	20	3058	2745	6/4/09	4/10/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008827	GCA_000162015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/015/GCA_000162015.1_ASM16201v1	-	A2-165
Streptomyces hygroscopicus subsp. limoneus	264445	PRJNA302679	302679	Terrabacteria group	Actinobacteria	10.5379	71.9745	chromosome I:NZ_CP013219.1/CP013219.1; chromosome II:NZ_CP013220.1/CP013220.1	-	2	9542	8837	11/20/15	3/12/17	Complete Genome	Korea Research Institute of Bioscience and Biotechnology	SAMN04277307	GCA_001447075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/447/075/GCA_001447075.1_ASM144707v1	-	KCTC 1717
Streptomyces hygroscopicus subsp. jinggangensis TL01	1203460	PRJNA169410	169410	Terrabacteria group	Actinobacteria	10.078	71.943	chromosome:NC_020895.1/CP003720.1; plasmid pSHJGH1:NC_020894.1/CP003721.1; plasmid pSHJGH2:NC_020293.1/CP003722.1	-	3	9175	8788	2/19/13	5/19/17	Complete Genome	"State Key Laboratory of Microbial Metabolism, Shanghai Jiaotong University"	SAMN02603881	GCA_000340845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/845/GCA_000340845.1_ASM34084v1	-	-
Actinomyces sp. oral taxon 414	712122	PRJNA282954	282954	Terrabacteria group	Actinobacteria	3.83642	71.9	chromosome:NZ_CP012590.1/CP012590.1	-	1	3102	2901	9/4/15	4/16/17	Complete Genome	The Forsyth Institute	SAMN04009745	GCA_001278845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/845/GCA_001278845.1_ASM127884v1	-	F0588
Cenarchaeum symbiosum A	414004	PRJNA202	202	TACK group	Thaumarchaeota	2.04509	57.4	chromosome:DP000238.1	-	1	2066	2017	11/20/06	5/27/14	Chromosome	DOE Joint Genome Institute	SAMN02744041	GCA_000200715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/200/715/GCA_000200715.1_ASM20071v1	-	-
Sanguibacter keddieii DSM 10542	446469	PRJNA19711	19711	Terrabacteria group	Actinobacteria	4.25341	71.9	chromosome:NC_013521.1/CP001819.1	-	1	3745	3641	11/19/09	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598426	GCA_000024925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/925/GCA_000024925.1_ASM2492v1	21304646	DSM 10542
Thermoanaerobacter ethanolicus CCSD1	589861	PRJNA33633	33633	Terrabacteria group	Firmicutes	2.20485	34.2	-	ACXY01	90	2282	1944	8/27/09	4/7/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN02441798	GCA_000175815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/815/GCA_000175815.1_ASM17581v1	-	CCSD1
Streptomyces hygroscopicus subsp. jinggangensis 5008	1133850	PRJNA81087	81087	Terrabacteria group	Actinobacteria	10.3837	71.847	chromosome:NC_017765.1/CP003275.1; plasmid pSHJG1:NC_017766.1/CP003276.1; plasmid pSHJG2:NC_016972.1/CP003277.1	-	3	9459	9028	1/27/12	5/19/17	Complete Genome	"State Key Laboratory of Microbial Metabolism, Shanghai Jiaotong University"	SAMN02603880	GCA_000245355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/355/GCA_000245355.1_ASM24535v1	22827618	5008
Nonomuraea sp. ATCC 55076	1909395	PRJNA348567	348567	Terrabacteria group	Actinobacteria	13.0474	71.8	chromosome:NZ_CP017717.1/CP017717.1	-	1	11835	11339	3/21/17	3/23/17	Complete Genome	Princeton University	SAMN05912833	GCA_002057455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/455/GCA_002057455.1_ASM205745v1	-	ATCC 55076
Streptomyces venezuelae	54571	PRJNA298854	298854	Terrabacteria group	Actinobacteria	9.05483	71.7	chromosome:NZ_CP013129.1/CP013129.1	-	1	8150	7737	11/13/15	3/12/17	Complete Genome	Ewha Womans University	SAMN04230917	GCA_001443625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/443/625/GCA_001443625.1_ASM144362v1	-	ATCC 15439
Streptomyces venezuelae	54571	PRJEB10583	297540	Terrabacteria group	Actinobacteria	9.0344	71.7	chromosome I:NZ_LN881739.1/LN881739.1	-	1	8138	7678	10/1/15	3/12/17	Complete Genome	National Center for Genome Resources (NCGR)	SAMEA3516846	GCA_001406115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/115/GCA_001406115.1_Streptomyces_venezuelae_ATCC_15439	-	ATCC 15439
Streptomyces sp. SirexAA-E	862751	PRJNA38225	38225	Terrabacteria group	Actinobacteria	7.41444	71.7	chromosome:NC_015953.1/CP002993.1	-	1	6625	6347	8/26/11	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02232054	GCA_000177195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/195/GCA_000177195.2_ASM17719v2	24710170	SirexAA-E
Streptomyces sp. 769	1262452	PRJNA182073	182073	Terrabacteria group	Actinobacteria	10.3383	71.6219	chromosome:NZ_CP003987.1/CP003987.1; plasmid pSGZL:NZ_CP003988.1/CP003988.1	-	2	8990	8423	1/7/15	3/11/17	Complete Genome	"Plant Protection Institute, Jilin Academy of Agricultural Science"	SAMN03275450	GCA_000816025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/025/GCA_000816025.1_ASM81602v1	-	769
Brachybacterium ginsengisoli	1331682	PRJNA392615	392615	Terrabacteria group	Actinobacteria	3.95325	71.6	chromosome:CP023564.1	-	1	3531	3382	10/2/17	10/2/17	Complete Genome	Kyung Hee University	SAMN07303563	GCA_002407065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/407/065/GCA_002407065.1_ASM240706v1	-	DCY80
Streptomyces sp. Tue 6075	1661694	PRJNA273702	273702	Terrabacteria group	Actinobacteria	7.93183	71.6	chromosome:NZ_CP010833.1/CP010833.1	-	1	6966	6670	1/4/17	3/14/17	Complete Genome	Bielefeld University	SAMN03295241	GCA_001931635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/635/GCA_001931635.1_ASM193163v1	-	Tue6075
Thermomonospora curvata DSM 43183	471852	PRJNA20825	20825	Terrabacteria group	Actinobacteria	5.63902	71.6	chromosome:NC_013510.1/CP001738.1	-	1	4941	4779	11/16/09	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598435	GCA_000024385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/385/GCA_000024385.1_ASM2438v1	21475583	DSM 43183
Kytococcus sedentarius DSM 20547	478801	PRJNA21067	21067	Terrabacteria group	Actinobacteria	2.78502	71.6	chromosome:NC_013169.1/CP001686.1	-	1	2651	2509	8/27/09	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598443	GCA_000023925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/925/GCA_000023925.1_ASM2392v1	21304632	DSM 20547
Streptomyces globisporus C-1027	1172567	PRJNA158251	158251	Terrabacteria group	Actinobacteria	7.7836	71.5541	chromosome:NZ_CP013738.1/CP013738.1; plasmid SGLP1:NZ_CP013739.1/CP013739.1; plasmid pSGL1:NZ_CP013740.1/CP013740.1	-	3	6991	6660	1/4/16	3/12/17	Complete Genome	"Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences and Peking Union Medical College"	SAMN02469977	GCA_000261345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/345/GCA_000261345.2_ASM26134v2	22815456	C-1027
Streptomyces sp. CdTB01	1725411	PRJNA302338	302338	Terrabacteria group	Actinobacteria	10.1916	71.5518	chromosome:NZ_CP013743.1/CP013743.1; plasmid unnamed:NZ_CP013744.1/CP013744.1	-	2	9290	8812	1/4/16	3/12/17	Complete Genome	Hunan Agricultural University	SAMN04235813	GCA_001484565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/565/GCA_001484565.1_ASM148456v1	-	CdTB01
Methylobacterium sp. 4-46	426117	PRJNA18809	18809	Proteobacteria	Alphaproteobacteria	7.73703	71.5192	chromosome:NC_010511.1/CP000943.1; plasmid pM44601:NC_010373.1/CP000944.1; plasmid pM44602:NC_010374.1/CP000945.1	-	3	7047	6685	2/20/08	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00623053	GCA_000019365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/365/GCA_000019365.1_ASM1936v1	-	Apr-46
Streptomyces sp. 3211	1964449	PRJNA377638	377638	Terrabacteria group	Actinobacteria	8.99129	71.5154	chromosome:NZ_CP020039.1/CP020039.1; plasmid p3211-1:NZ_CP020040.1/CP020040.1; plasmid p3211-2:NZ_CP020041.1/CP020041.1	-	3	8209	7626	3/15/17	3/17/17	Complete Genome	University of Minnesota	SAMN06464033	GCA_002028385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/385/GCA_002028385.1_ASM202838v1	-	3211
Corynebacterium frankenforstense DSM 45800	1437875	PRJNA232093	232093	Terrabacteria group	Actinobacteria	2.60415	71.5	chromosome:NZ_CP009247.1/CP009247.1	-	1	2261	2149	1/10/17	4/17/17	Complete Genome	Bielefeld University	SAMN02991553	GCA_001941485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/485/GCA_001941485.1_ASM194148v1	-	ST18
Streptomyces noursei ATCC 11455	316284	PRJNA272896	272896	Terrabacteria group	Actinobacteria	9.81588	71.5	chromosome:NZ_CP011533.1/CP011533.1	-	1	8615	8000	8/12/16	3/13/17	Complete Genome	Bielefeld University	SAMN03287657	GCA_001704275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/275/GCA_001704275.1_ASM170427v1	-	ATCC 11455
Streptomyces pristinaespiralis	38300	PRJNA281980	281980	Terrabacteria group	Actinobacteria	8.53259	71.5	chromosome:NZ_CP011340.1/CP011340.1	-	1	7431	7122	9/2/15	3/11/17	Complete Genome	Shanghai Institutes for Biological Sciences (SIBS) of Chinese Academy of Sciences (CAS)	SAMN03565307	GCA_001278075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/075/GCA_001278075.1_ASM127807v1	-	HCCB 10218
Amycolatopsis methanolica 239	1068978	PRJNA173670	173670	Terrabacteria group	Actinobacteria	7.23739	71.5	chromosome:NZ_CP009110.1/CP009110.1	-	1	7185	6538	8/12/14	4/9/17	Complete Genome	Chinese National Human Genome Center at Shanghai	SAMN02777954	GCA_000739085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/085/GCA_000739085.1_ASM73908v1	-	239
Streptomyces fulvissimus DSM 40593	1303692	PRJNA192408	192408	Terrabacteria group	Actinobacteria	7.90576	71.5	chromosome:NC_021177.1/CP005080.1	-	1	7042	6784	5/1/13	3/9/17	Complete Genome	"Helmholtz Institute for Pharmaceutical Research Saarland, Helmholtz Centre for Infection Research"	SAMN02603305	GCA_000385945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/945/GCA_000385945.1_ASM38594v1	-	DSM 40593
Streptomyces scabiei 87.22	680198	PRJEA40749	40749	Terrabacteria group	Actinobacteria	10.1487	71.5	chromosome:NC_013929.1/FN554889.1	-	1	8912	8504	10/2/09	5/19/17	Complete Genome	Wellcome Trust Sanger Institute	SAMEA2272773	GCA_000091305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/091/305/GCA_000091305.1_ASM9130v1	20064060	87.22
Nocardioides sp. JS614	196162	PRJNA12738	12738	Terrabacteria group	Actinobacteria	5.29368	71.4849	chromosome:NC_008699.1/CP000509.1; plasmid pNOCA01:NC_008697.1/CP000508.1	-	2	5082	4960	12/18/06	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02598280	GCA_000015265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/265/GCA_000015265.1_ASM1526v1	21551312	JS614
Sinomonas atrocyanea	37927	PRJNA312847	312847	Terrabacteria group	Actinobacteria	4.4922	71.4325	chromosome:NZ_CP014518.1/CP014518.1; plasmid pSA01:NZ_CP014519.1/CP014519.1	-	2	4143	3941	2/29/16	4/17/17	Complete Genome	Korea Research Institute of Bioscience and Biotechnology	SAMN04508113	GCA_001577305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/305/GCA_001577305.1_ASM157730v1	-	KCTC 3377
Curtobacterium sp. BH-2-1-1	1905847	PRJNA345003	345003	Terrabacteria group	Actinobacteria	3.79595	71.4	chromosome:NZ_CP017580.1/CP017580.1	-	1	3617	3518	10/21/16	4/13/17	Complete Genome	NIBIO	SAMN05854879	GCA_001806325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/325/GCA_001806325.1_ASM180632v1	-	BH-2-1-1
Sorangium cellulosum So ce56	448385	PRJNA28111	28111	Proteobacteria	delta/epsilon subdivisions	13.0338	71.4	chromosome:NC_010162.1/AM746676.1	-	1	9757	9369	11/27/07	5/19/17	Complete Genome	Bielefeld Univ	SAMEA3138271	GCA_000067165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/067/165/GCA_000067165.1_ASM6716v1	17965706	So ce 56
Actinoplanes sp. SE50/110	134676	PRJEB15656	369058	Terrabacteria group	Actinobacteria	9.24017	71.3	chromosome I:NZ_LT827010.1/LT827010.1	-	1	8281	7972	3/17/17	3/24/17	Complete Genome	CEBITEC	SAMEA4544645	GCA_900119315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/315/GCA_900119315.1_ACP50	-	-
Actinomyces sp. Chiba101	1851395	PRJDB5147	369781	Terrabacteria group	Actinobacteria	2.87786	71.3	chromosome:AP017896.1	-	1	2424	2364	2/2/17	2/2/17	Complete Genome	"NODAI Genome Research Center, Tokyo University of Agriculture"	SAMD00059583	GCA_002356195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/195/GCA_002356195.1_ASM235619v1	-	Chiba101
Streptomyces sp. RTd22	1841249	PRJNA320307	320307	Terrabacteria group	Actinobacteria	11.1423	71.3	chromosome:NZ_CP015726.1/CP015726.1	-	1	9567	8657	5/23/16	3/14/17	Complete Genome	Faculdade de Ciencias Farmaceuticas de Ribeirao Preto - University of Sao Paulo	SAMN04901306	GCA_001650215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/215/GCA_001650215.1_ASM165021v1	-	RTd22
Streptomyces sp. S10(2016)	1783515	PRJNA316940	316940	Terrabacteria group	Actinobacteria	9.08337	71.3	chromosome:NZ_CP015098.1/CP015098.1	-	1	8191	7722	4/6/16	3/13/17	Complete Genome	Chinese Academy of Sciences	SAMN04592628	GCA_001611795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/795/GCA_001611795.1_ASM161179v1	-	S10
Amycolatopsis mediterranei RB	1221524	PRJNA172643	172643	Terrabacteria group	Actinobacteria	10.2469	71.3	chromosome:NC_022116.1/CP003777.1	-	1	9546	9339	8/22/13	4/3/17	Complete Genome	Institute of Plant Physiology and Ecology	SAMN02603407	GCA_000454025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/025/GCA_000454025.1_ASM45402v1	-	RB
Actinoplanes sp. N902-109	649831	PRJNA198760	198760	Terrabacteria group	Actinobacteria	9.22805	71.3	chromosome:NC_021191.1/CP005929.1	-	1	8087	7768	5/8/13	4/17/17	Complete Genome	Shanghai Institute of Pharmaceutical Industry	SAMN02603860	GCA_000389965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/965/GCA_000389965.1_ASM38996v1	-	N902-109
Amycolatopsis mediterranei S699	713604	PRJNA170006	170006	Terrabacteria group	Actinobacteria	10.2469	71.3	chromosome:NC_018266.1/CP003729.1	-	1	9545	9346	7/30/12	5/18/17	Complete Genome	"Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences"	SAMN02603408	GCA_000282715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/715/GCA_000282715.1_ASM28271v1	23012281	S699
Actinoplanes sp. SE50/110	134676	PRJNA76835	76835	Terrabacteria group	Actinobacteria	9.23985	71.3	chromosome:NC_017803.1/CP003170.1	-	1	8293	7965	12/12/11	5/18/17	Complete Genome	"Center For Biotechnology, Bielefeld University"	SAMN02603081	GCA_000237145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/145/GCA_000237145.1_ASM23714v1	-	SE50/110
Amycolatopsis mediterranei S699	713604	PRJNA43503	43503	Terrabacteria group	Actinobacteria	10.2368	71.3	chromosome:NC_017186.1/CP002896.1	-	1	9532	9314	7/19/11	5/18/17	Complete Genome	University of Delhi	SAMN02604164	GCA_000220945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/945/GCA_000220945.1_ASM22094v1	21914879	S699
Amycolatopsis mediterranei U32	749927	PRJNA46889	46889	Terrabacteria group	Actinobacteria	10.2367	71.3	chromosome:NC_014318.1/CP002000.1	-	1	9292	9228	6/29/10	8/28/16	Complete Genome	"Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences"	SAMN02603409	GCA_000196835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/835/GCA_000196835.1_ASM19683v1	20567260	U32
Kocuria rhizophila	72000	PRJNA231221	231221	Terrabacteria group	Actinobacteria	2.6978	71.2	chromosome:NZ_CP022039.1/CP022039.1	-	1	2358	2205	6/27/17	6/29/17	Complete Genome	US Food and Drug Administration 	SAMN06173315	GCA_002208685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/685/GCA_002208685.1_ASM220868v1	-	FDAARGOS_302
Janibacter indicus	857417	PRJNA300616	300616	Terrabacteria group	Actinobacteria	3.40119	71.2	chromosome:NZ_CP013290.1/CP013290.1	-	1	3288	3159	12/5/16	8/3/17	Complete Genome	The First Affiliated Hospital of NanChang University	SAMN04226596	GCA_001889125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/125/GCA_001889125.1_ASM188912v1	-	YFY001
Methylobacterium sp. C1	1479019	PRJNA347892	347892	Proteobacteria	Alphaproteobacteria	6.45915	71.2	chromosome:NZ_CP017640.1/CP017640.1	-	1	6066	5850	10/26/16	4/13/17	Complete Genome	Soochow University	SAMN05898468	GCA_001854385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/385/GCA_001854385.1_ASM185438v1	-	C1
Rubrivivax gelatinosus IL144	983917	PRJNA62703	62703	Proteobacteria	Betaproteobacteria	5.04325	71.2	chromosome:NC_017075.1/AP012320.1	-	1	4630	4533	3/29/12	4/8/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00061116	GCA_000284255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/255/GCA_000284255.1_ASM28425v1	22689232	IL144
Kocuria rhizophila DC2201	378753	PRJDA27833	27833	Terrabacteria group	Actinobacteria	2.69754	71.2	chromosome:NC_010617.1/AP009152.1	-	1	2364	2264	4/18/08	4/6/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00060935	GCA_000010285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/285/GCA_000010285.1_ASM1028v1	18408034	DC2201 (= NBRC 103217)
Frankia sp. EAN1pec	298653	PRJNA13915	13915	Terrabacteria group	Actinobacteria	8.98204	71.2	chromosome:NC_009921.1/CP000820.1	-	1	7542	6904	10/10/07	5/18/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598325	GCA_000018005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/005/GCA_000018005.1_ASM1800v1	-	EAN1.pec
Streptomyces autolyticus	75293	PRJNA360354	360354	Terrabacteria group	Actinobacteria	10.1847	71.1663	chromosome:NZ_CP019458.1/CP019458.1; plasmid unnamed2:NZ_CP019459.1/CP019459.1; plasmid unnamed3:NZ_CP019460.1/CP019460.1; plasmid unnamed4:NZ_CP019461.1/CP019461.1; plasmid unnamed5:NZ_CP019462.1/CP019462.1; plasmid unnamed6:NZ_CP019463.1/CP019463.1; plasmid unnamed7:NZ_CP019464.1/CP019464.1; plasmid unnamed8:NZ_CP019465.1/CP019465.1	-	8	8218	7711	2/3/17	6/9/17	Complete Genome	school of medicine	SAMN06209296	GCA_001983975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/975/GCA_001983975.1_ASM198397v1	28472671	CGMCC0516
Actinoalloteichus hoggarensis	1470176	PRJNA394565	394565	Terrabacteria group	Actinobacteria	6.60672	71.1	chromosome:NZ_CP022521.1/CP022521.1	-	1	5631	5420	7/27/17	8/1/17	Complete Genome	Bielefeld University	SAMN07353059	GCA_002234535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/234/535/GCA_002234535.1_ASM223453v1	-	DSM 45943
Actinomyces gaoshouyii	1960083	PRJNA380331	380331	Terrabacteria group	Actinobacteria	2.35936	71.1	chromosome:NZ_CP020468.1/CP020468.1	-	1	1997	1887	4/3/17	4/5/17	Complete Genome	China CDC	SAMN06640690	GCA_002076915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/915/GCA_002076915.1_ASM207691v1	-	pika_114
Streptomyces puniciscabiei	164348	PRJNA338069	338069	Terrabacteria group	Actinobacteria	9.69895	71.1	chromosome:NZ_CP017248.1/CP017248.1	-	1	8653	7969	9/20/16	3/14/17	Complete Genome	Chungnam National University	SAMN05520841	GCA_001735805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/735/805/GCA_001735805.1_ASM173580v1	-	TW1S1
Saccharopolyspora erythraea NRRL 2338	405948	PRJEA18489	18489	Terrabacteria group	Actinobacteria	8.2128	71.1	chromosome:NC_009142.1/AM420293.1	-	1	7233	6993	3/21/07	5/19/17	Complete Genome	"Department of Biochemistry, University of Cambridge"	SAMEA2272514	GCA_000062885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/062/885/GCA_000062885.1_ASM6288v1	17369815	NRRL 2338
Streptomyces sp. PAMC 26508	1265601	PRJNA182709	182709	Terrabacteria group	Actinobacteria	7.63025	71.0645	chromosome:NC_021055.1/CP003990.1; plasmid pSP01:NC_021056.1/CP003991.1	-	2	6758	6476	4/15/13	5/19/17	Complete Genome	Korea Polar Research Institute	SAMN01821993	GCA_000364805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/805/GCA_000364805.1_ASM36480v1	-	PAMC 26508
Phenylobacterium zucineum HLK1	450851	PRJNA19931	19931	Proteobacteria	Alphaproteobacteria	4.37923	71.0551	chromosome:NC_011144.1/CP000747.1; plasmid unnamed:NC_011143.1/CP000748.1	-	2	4288	4192	8/18/08	5/19/17	Complete Genome	"Cancer Institute, The Second Affiliated Hospital, Zhejiang University Medical School"	SAMN02603048	GCA_000017265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/265/GCA_000017265.1_ASM1726v1	18700039	HLK1
Methylobacterium radiotolerans JCM 2831	426355	PRJNA18817	18817	Proteobacteria	Alphaproteobacteria	6.89911	71.0375	chromosome:NC_010505.1/CP001001.1; plasmid pMRAD01:NC_010510.1/CP001002.1; plasmid pMRAD02:NC_010509.1/CP001003.1; plasmid pMRAD03:NC_010514.1/CP001004.1; plasmid pMRAD04:NC_010517.1/CP001005.1; plasmid pMRAD05:NC_010518.1/CP001006.1; plasmid pMRAD06:NC_010502.1/CP001007.1; plasmid pMRAD07:NC_010504.1/CP001008.1; plasmid pMRAD08:NC_010507.1/CP001009.1	-	9	6534	6336	3/21/08	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN00000277	GCA_000019725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/725/GCA_000019725.1_ASM1972v1	-	JCM 2831
Streptomyces gilvosporeus	553510	PRJNA374466	374466	Terrabacteria group	Actinobacteria	8.4823	71	chromosome:NZ_CP020569.1/CP020569.1	-	1	7522	7145	4/10/17	4/13/17	Complete Genome	Shandong Academy of Medical Sciences	SAMN06323804	GCA_002082195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/195/GCA_002082195.1_ASM208219v1	-	F607
Streptomyces lincolnensis	1915	PRJNA327477	327477	Terrabacteria group	Actinobacteria	10.3191	71	chromosome:NZ_CP016438.1/CP016438.1	-	1	9267	8828	7/15/16	3/14/17	Complete Genome	shanghaijiaotong university	SAMN05335414	GCA_001685355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/355/GCA_001685355.1_ASM168535v1	-	NRRL 2936
Chthoniobacter flavus Ellin428	497964	PRJNA28531	28531	PVC group	Verrucomicrobia	7.8487	61.1	-	ABVL01	62	6602	6301	8/15/08	5/18/17	Scaffold	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000678	GCA_000173075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/075/GCA_000173075.1_ASM17307v1	21460085	Ellin428
Microbacterium sp. No. 7	1714373	PRJNA295341	295341	Terrabacteria group	Actinobacteria	4.82796	70.9793	chromosome:NZ_CP012697.1/CP012697.1; plasmid A:NZ_CP012698.1/CP012698.1; plasmid B:NZ_CP012699.1/CP012699.1	-	3	4521	4393	10/14/15	4/11/17	Complete Genome	Kyoto Institute of Technology	SAMN04046238	GCA_001314225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/225/GCA_001314225.1_ASM131422v1	-	No. 7
Streptomyces pratensis ATCC 33331	591167	PRJNA33771	33771	Terrabacteria group	Actinobacteria	7.6561	70.9525	chromosome:NC_016114.1/CP002475.1; plasmid pSFLA01:NC_016110.1/CP002476.1; plasmid pSFLA02:NC_016115.1/CP002477.1	-	3	6863	6537	1/25/11	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00191232	GCA_000176115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/115/GCA_000176115.2_ASM17611v2	-	ATCC 33331
Streptomyces violaceusniger Tu 4113	653045	PRJNA43031	43031	Terrabacteria group	Actinobacteria	11.1383	70.9048	chromosome:NC_015957.1/CP002994.1; plasmid pSTRVI01:NC_015951.1/CP002995.1; plasmid pSTRVI02:NC_015952.1/CP002996.1	-	3	9526	8824	8/23/11	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00016986	GCA_000147815.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/815/GCA_000147815.3_ASM14781v3	-	Tu 4113
Brachybacterium sp. P6-10-X1	1903186	PRJNA343396	343396	Terrabacteria group	Actinobacteria	4.3856	70.9	chromosome:NZ_CP017297.1/CP017297.1	-	1	3884	3748	1/23/17	4/17/17	Complete Genome	Polar Research Institute of China	SAMN06245905	GCA_001969445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/445/GCA_001969445.1_ASM196944v1	-	P6-10-X1
Nakamurella multipartita DSM 44233	479431	PRJNA29537	29537	Terrabacteria group	Actinobacteria	6.0603	70.9	chromosome:NC_013235.1/CP001737.1	-	1	5408	5197	9/15/09	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598467	GCA_000024365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/365/GCA_000024365.1_ASM2436v1	21304699	DSM 44233
Streptosporangium roseum DSM 43021	479432	PRJNA21083	21083	Terrabacteria group	Actinobacteria	10.3695	70.8965	chromosome:NC_013595.1/CP001814.1; plasmid pSROS01:NC_013596.1/CP001815.1	-	2	9192	8874	12/10/09	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002585	GCA_000024865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/865/GCA_000024865.1_ASM2486v1	21304675	DSM 43021
Verrucosispora maris AB-18-032	263358	PRJNA59863	59863	Terrabacteria group	Actinobacteria	6.73227	70.8948	chromosome:NC_015434.1/CP002638.1; plasmid pVMKU:NC_015409.1/CP002639.1	-	2	6049	5823	4/13/11	5/19/17	Complete Genome	CSBL at Korea University	SAMN02603167	GCA_000204155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/155/GCA_000204155.1_ASM20415v1	21551311	AB-18-032
Cnuibacter physcomitrellae	1619308	PRJNA379856	379856	Terrabacteria group	Actinobacteria	4.35165	70.8046	chromosome:NZ_CP020715.1/CP020715.1; plasmid unnamed1:NZ_CP020716.1/CP020716.1; plasmid unnamed2:NZ_CP020717.1/CP020717.1	-	3	4125	4012	4/18/17	4/21/17	Complete Genome	Capital Normal University	SAMN06622498	GCA_002096055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/055/GCA_002096055.1_ASM209605v1	-	XA(T)
Brachybacterium sp. VM2412	2017484	PRJNA392611	392611	Terrabacteria group	Actinobacteria	3.79666	70.8	chromosome:CP023563.1	-	1	3404	3253	10/2/17	10/2/17	Complete Genome	Kyung Hee University	SAMN07303503	GCA_002407185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/407/185/GCA_002407185.1_ASM240718v1	-	VM2412
Streptomyces hygroscopicus	1912	PRJNA350243	350243	Terrabacteria group	Actinobacteria	12.0122	70.8	chromosome:NZ_CP018627.1/CP018627.1	-	1	10197	9434	3/6/17	3/9/17	Complete Genome	Shanghai Jiao Tong University	SAMN05935554	GCA_002021875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/875/GCA_002021875.1_ASM202187v1	-	XM201
Helicobacter pullorum MIT 98-5489	537972	PRJNA30075	30075	Proteobacteria	delta/epsilon subdivisions	1.95167	34.3	-	ABQU01	44	1978	1850	8/26/08	3/30/17	Scaffold	Broad Institute	SAMN02463681	GCA_000155495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/495/GCA_000155495.1_ASM15549v1	25212613	MIT 98-5489
Streptomyces griseochromogenes	68214	PRJNA307132	307132	Terrabacteria group	Actinobacteria	10.7647	70.8	chromosome:NZ_CP016279.1/CP016279.1	-	1	9750	9046	7/5/16	3/13/17	Complete Genome	China National Rice Research Institute	SAMN04375936	GCA_001542625.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/625/GCA_001542625.2_ASM154262v2	-	ATCC 14511
Helicobacter canadensis MIT 98-5491	537970	PRJNA30719	30719	Proteobacteria	delta/epsilon subdivisions	1.62384	33.7	chromosome:NZ_CM000776.2/CM000776.2	ACSF01	1	1612	1539	7/7/09	4/7/17	Chromosome	Helicobacter canadensis MIT 98-5491 Sequence Consortium	SAMN00004577	GCA_000162575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/575/GCA_000162575.1_ASM16257v1	19542273	MIT 98-5491
Actinoplanes missouriensis 431	512565	PRJDA29027	29027	Terrabacteria group	Actinobacteria	8.77347	70.8	chromosome:NC_017093.1/AP012319.1	-	1	8066	7864	3/29/12	4/17/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00060941	GCA_000284295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/295/GCA_000284295.1_ASM28429v1	-	431
Streptomyces bingchenggensis BCW-1	749414	PRJNA46847	46847	Terrabacteria group	Actinobacteria	11.9367	70.8	chromosome:NC_016582.1/CP002047.1	-	1	10091	9359	5/28/10	5/19/17	Complete Genome	Northeast Agricultural University	SAMN02603683	GCA_000092385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/385/GCA_000092385.1_ASM9238v1	20581206	BCW-1
Methylobacterium aquaticum	270351	PRJDB3341	276532	Proteobacteria	Alphaproteobacteria	7.55796	70.7725	chromosome Unknown:NZ_AP014704.1/AP014704.1; plasmid pMaq22A_1p:NZ_AP014705.1/AP014705.1; plasmid pMaq22A_2p:NZ_AP014706.1/AP014706.1; plasmid pMaq22A_3p:NZ_AP014707.1/AP014707.1; plasmid pMaq22A_4p:NZ_AP014708.1/AP014708.1; plasmid pMaq22A_5p:NZ_AP014709.1/AP014709.1	-	6	6976	6607	2/24/15	5/16/17	Complete Genome	Okayama University	SAMD00024788	GCA_001548015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/015/GCA_001548015.1_ASM154801v1	-	MA-22A
Streptomyces lydicus	47763	PRJNA222592	222592	Terrabacteria group	Actinobacteria	9.30752	70.7	chromosome:NZ_CP007699.2/CP007699.2	-	1	8318	7853	3/13/15	4/10/17	Complete Genome	"Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences"	SAMN02864172	GCA_000952035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/035/GCA_000952035.2_ASM95203v2	-	A02
Intrasporangium calvum DSM 43043	710696	PRJNA43527	43527	Terrabacteria group	Actinobacteria	4.02438	70.7	chromosome:NC_014830.1/CP002343.1	-	1	3685	3554	12/29/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713569	GCA_000184685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/184/685/GCA_000184685.1_ASM18468v1	21304734	DSM 43043
Streptomyces avermitilis MA-4680 = NBRC 14893	227882	PRJNA189	189	Terrabacteria group	Actinobacteria	9.11989	70.6845	chromosome:NC_003155.5/BA000030.4; plasmid SAP1:NC_004719.1/AP005645.1	-	2	8010	7490	10/15/01	3/13/17	Complete Genome	NITE	SAMD00061088	GCA_000009765.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/765/GCA_000009765.2_ASM976v2	"115,729,481,269,256,000,000,000"	MA-4680
Nocardia farcinica IFM 10152	247156	PRJNA13117	13117	Terrabacteria group	Actinobacteria	6.29234	70.6615	chromosome:NC_006361.1/AP006618.1; plasmid pNF1:NC_006362.1/AP006619.1; plasmid pNF2:NC_006363.1/AP006620.1	-	3	5931	5792	10/9/04	8/25/17	Complete Genome	"Department of Bioactive Molecules, National Institute of Infectious Diseases"	SAMD00061069	GCA_000009805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/805/GCA_000009805.1_ASM980v1	15466710	IFM 10152
Nocardia farcinica	37329	PRJEB6403	251923	Terrabacteria group	Actinobacteria	6.45978	70.6053	chromosome 1:NZ_LN868938.1/LN868938.1; plasmid 2:NZ_LN868939.1/LN868939.1; plasmid 3:NZ_LN868940.1/LN868940.1; plasmid 4:NZ_LN868941.1/LN868941.1; plasmid 5:NZ_LN868942.1/LN868942.1	-	5	6089	5878	7/8/15	4/11/17	Complete Genome	SC	SAMEA2498477	GCA_001182745.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/745/GCA_001182745.2_NCTC11134	-	NCTC11134
Myxococcus macrosporus DSM 14697	1189310	PRJNA186904	186904	Proteobacteria	delta/epsilon subdivisions	8.97351	70.6	chromosome:NZ_CP022203.1/CP022203.1	-	1	7309	6982	9/15/17	9/18/17	Complete Genome	Max Planck Institute for Terrestrial Microbiology	SAMN06167052	GCA_002305895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/895/GCA_002305895.1_ASM230589v1	-	DSM 14697
Vibrio splendidus 12B01	314291	PRJNA13568	13568	Proteobacteria	Gammaproteobacteria	5.70223	44.1	-	AAMR01	26	5023	4759	1/5/06	5/19/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436082	GCA_000152765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/765/GCA_000152765.1_ASM15276v1	-	12B01
Deinococcus actinosclerus	1768108	PRJNA305458	305458	Terrabacteria group	Deinococcus-Thermus	3.26433	70.6	chromosome:NZ_CP013910.1/CP013910.1	-	1	3216	3073	1/8/16	4/11/17	Complete Genome	Seoul Women's University	SAMN04325383	GCA_001507665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/665/GCA_001507665.1_ASM150766v1	-	BM2
Rhodococcus aetherivorans	191292	PRJNA281168	281168	Terrabacteria group	Actinobacteria	5.92275	70.6	chromosome:NZ_CP011341.1/CP011341.1	-	1	5388	5020	4/30/15	4/10/17	Complete Genome	Institute of Microbiology Chinese Academy of Sciences	SAMN03486836	GCA_000982715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/715/GCA_000982715.1_ASM98271v1	26139718	IcdP1
Kutzneria albida DSM 43870	1449976	PRJNA235190	235190	Terrabacteria group	Actinobacteria	9.87493	70.6	chromosome:NZ_CP007155.1/CP007155.1	-	1	8765	8510	2/3/14	4/9/17	Complete Genome	"Helmholtz Institute for Pharmaceutical Research Saarland, Helmholtz Centre for Infection Research"	SAMN02641507	GCA_000525635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/635/GCA_000525635.1_ASM52563v1	25301375	DSM 43870
Myxococcus fulvus HW-1	483219	PRJNA27837	27837	Proteobacteria	delta/epsilon subdivisions	9.00359	70.6	chromosome:NC_015711.1/CP002830.1	-	1	7330	6929	6/22/11	5/19/17	Complete Genome	"College of Life Science, Shandong University"	SAMN02603152	GCA_000219105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/105/GCA_000219105.1_ASM21910v1	21868801	HW-1
Kribbella flavida DSM 17836	479435	PRJNA21089	21089	Terrabacteria group	Actinobacteria	7.57949	70.6	chromosome:NC_013729.1/CP001736.1	-	1	7077	6912	1/13/10	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598447	GCA_000024345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/345/GCA_000024345.1_ASM2434v1	21304701	DSM 17836
Streptomyces niveus	193462	PRJNA328345	328345	Terrabacteria group	Actinobacteria	7.99049	70.5	chromosome:NZ_CP018047.1/CP018047.1	-	1	7037	6733	3/2/17	3/9/17	Complete Genome	Dezhou university	SAMN05370045	GCA_002009175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/175/GCA_002009175.1_ASM200917v1	-	SCSIO 3406
Bacillus megaterium MSP20.1	1348908	PRJNA209226	209226	Terrabacteria group	Firmicutes	4.36903	36.5	-	AVBB01	140	4145	3894	10/24/13	4/2/17	Scaffold	Directorate of Groundnut Research (Indian Council of Agricultural Research)	SAMN02469733	GCA_000480335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/335/GCA_000480335.1_SOAPdenovo	24407642	MSP20.1
Microbacterium sp. BH-3-3-3	1906742	PRJNA345405	345405	Terrabacteria group	Actinobacteria	3.50849	70.5	chromosome:NZ_CP017674.1/CP017674.1	-	1	3240	3130	10/20/16	4/13/17	Complete Genome	NIBIO	SAMN05862067	GCA_001792815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/815/GCA_001792815.1_ASM179281v1	-	BH-3-3-3
Kocuria palustris	71999	PRJNA293988	293988	Terrabacteria group	Actinobacteria	2.85445	70.5	chromosome:NZ_CP012507.1/CP012507.1	-	1	2533	2396	8/27/15	4/11/17	Complete Genome	University of Missouri - Columbia	SAMN04012814	GCA_001275345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/345/GCA_001275345.1_ASM127534v1	26472837	MU14/1
Rhodospirillum centenum SW	414684	PRJNA18307	18307	Proteobacteria	Alphaproteobacteria	4.35554	70.5	chromosome:NC_011420.2/CP000613.2	-	1	3963	3835	10/24/08	5/19/17	Complete Genome	TGen	SAMN02603908	GCA_000016185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/185/GCA_000016185.1_ASM1618v1	20500872	SW; ATCC 51521
[Clostridium] spiroforme DSM 1552	428126	PRJNA18925	18925	Terrabacteria group	Firmicutes	2.50788	28.6	-	ABIK02	12	2366	2223	1/2/08	4/17/17	Scaffold	Washington University Genome Sequencing Center	SAMN00627073	GCA_000154805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/805/GCA_000154805.1_ASM15480v1	-	DSM 1552
[Eubacterium] siraeum DSM 15702	428128	PRJNA185356	185356	Terrabacteria group	Firmicutes	2.66404	45	-	ARNC01	34	2456	2334	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440977	GCA_000382085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/085/GCA_000382085.1_ASM38208v1	-	DSM 15702
[Clostridium] leptum DSM 753	428125	PRJNA18923	18923	Terrabacteria group	Firmicutes	3.27021	50.2	-	ABCB02	21	3081	2966	7/13/07	4/7/17	Scaffold	Washington University Genome Sequencing Center	SAMN00627074	GCA_000154345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/345/GCA_000154345.1_ASM15434v1	-	DSM 753
[Eubacterium] dolichum DSM 3991	428127	PRJNA18927	18927	Terrabacteria group	Firmicutes	2.19105	38.1	-	ABAW02	19	2206	2101	6/6/07	4/17/17	Scaffold	Washington University Genome Sequencing Center	SAMN00000734	GCA_000154285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/285/GCA_000154285.1_ASM15428v1	-	DSM 3991
Catenibacterium mitsuokai DSM 15897	451640	PRJNA19923	19923	Terrabacteria group	Firmicutes	2.67131	36.8	-	ACCK01	475	2631	2457	12/17/08	4/7/17	Contig	Washington University Genome Sequencing Center	SAMN00000012	GCA_000173795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/795/GCA_000173795.1_ASM17379v1	-	DSM 15897
Roseburia faecis	301302	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.56782	43	-	CYXV01	39	3527	3301	10/1/15	4/11/17	Contig	SC	SAMEA3545271	GCA_001405615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/615/GCA_001405615.1_13414_6_47	-	2789STDY5608863
Blautia hydrogenotrophica DSM 10507	476272	PRJNA21007	21007	Terrabacteria group	Firmicutes	3.62694	45.1	-	ACBZ01	33	3496	3249	2/23/09	4/7/17	Scaffold	Washington University Genome Sequencing Center	SAMN02415620	GCA_000157975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/975/GCA_000157975.1_ASM15797v1	-	DSM 10507
Marvinbryantia formatexigens DSM 14469	478749	PRJNA21051	21051	Terrabacteria group	Firmicutes	4.54896	49.6	-	ACCL02	58	4299	4081	12/17/08	5/19/17	Contig	Washington University Genome Sequencing Center	SAMN00000025	GCA_000173815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/815/GCA_000173815.1_ASM17381v1	-	DSM 14469
Alistipes putredinis DSM 17216	445970	PRJNA19655	19655	FCB group	Bacteroidetes/Chlorobi group	2.55068	53.3	-	ABFK02	12	2424	2303	9/11/07	4/7/17	Scaffold	Washington University Genome Sequencing Center	SAMN00000002	GCA_000154465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/465/GCA_000154465.1_ASM15446v1	-	DSM 17216
Anaerofustis stercorihominis DSM 17244	445971	PRJNA19657	19657	Terrabacteria group	Firmicutes	2.2847	33.3	-	ABIL02	5	2250	2161	1/2/08	4/17/17	Scaffold	Washington University Genome Sequencing Center	SAMN02299418	GCA_000154825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/825/GCA_000154825.1_ASM15482v1	-	DSM 17244
Anaerotruncus colihominis DSM 17241	445972	PRJNA19659	19659	Terrabacteria group	Firmicutes	3.71969	54.2	-	ABGD02	28	3774	3605	10/10/07	4/10/17	Scaffold	Washington University Genome Sequencing Center	SAMN00000003	GCA_000154565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/565/GCA_000154565.1_ASM15456v1	-	DSM 17241
Intestinibacter bartlettii DSM 16795	445973	PRJNA19661	19661	Terrabacteria group	Firmicutes	2.97226	28.8	-	ABEZ02	18	2723	2601	9/11/07	4/10/17	Scaffold	Washington University Genome Sequencing Center	SAMN02299419	GCA_000154445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/445/GCA_000154445.1_ASM15444v1	-	DSM 16795
Erysipelatoclostridium ramosum DSM 1402	445974	PRJNA19663	19663	Terrabacteria group	Firmicutes	3.2352	31.4	-	ABFX02	12	3089	2982	10/3/07	4/7/17	Scaffold	Washington University Genome Sequencing Center	SAMN00000007	GCA_000154485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/485/GCA_000154485.1_ASM15448v1	-	DSM 1402
Collinsella stercoris DSM 13279	445975	PRJNA19665	19665	Terrabacteria group	Actinobacteria	2.47543	62.7	-	ABXJ01	35	2100	1896	10/2/08	4/17/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008814	GCA_000156215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/215/GCA_000156215.1_ASM15621v1	-	DSM 13279
Ruminococcus lactaris ATCC 29176	471875	PRJNA20557	20557	Terrabacteria group	Firmicutes	2.73123	42.7	-	ABOU02	47	2618	2403	4/16/08	4/7/17	Scaffold	Washington University Genome Sequencing Center	SAMN00000022	GCA_000155205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/205/GCA_000155205.1_ASM15520v1	-	ATCC 29176
Rubrobacter xylanophilus DSM 9941	266117	PRJNA10670	10670	Terrabacteria group	Actinobacteria	3.22575	70.5	chromosome:NC_008148.1/CP000386.1	-	1	3257	3160	6/9/06	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02598258	GCA_000014185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/185/GCA_000014185.1_ASM1418v1	-	DSM 9941
Rhodococcus sp. WB1	1033922	PRJNA317416	317416	Terrabacteria group	Actinobacteria	6.14856	70.4795	chromosome:NZ_CP015529.1/CP015529.1; plasmid pWB1:NZ_CP015530.1/CP015530.1	-	2	5565	5390	8/9/16	4/17/17	Complete Genome	Zhejiang Academy of Agricultural Sciences	SAMN04606842	GCA_001700945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/945/GCA_001700945.1_ASM170094v1	-	WB1
Bacteroides coprocola DSM 17136	470145	PRJNA20521	20521	FCB group	Bacteroidetes/Chlorobi group	4.30012	41.9	-	ABIY02	90	3923	3565	1/2/08	5/18/17	Scaffold	Washington University Genome Sequencing Center	SAMN00000014	GCA_000154845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/845/GCA_000154845.1_ASM15484v1	-	DSM 17136
Bacteroides intestinalis	329854	PRJNA257717	257717	FCB group	Bacteroidetes/Chlorobi group	6.82835	42.9	-	LTDF01	102	5234	5036	3/2/16	4/12/17	Scaffold	The Genome Institute at Washington University	SAMN03956430	GCA_001578635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/635/GCA_001578635.1_ASM157863v1	-	KLE1704
Coprococcus comes ATCC 27758	470146	PRJNA20525	20525	Terrabacteria group	Firmicutes	3.24221	42.5	-	ABVR01	13	3283	2649	3/12/09	4/7/17	Scaffold	Washington University Genome Sequencing Center	SAMN00000016	GCA_000155875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/875/GCA_000155875.1_ASM15587v1	-	ATCC 27758
Proteus penneri ATCC 35198	471881	PRJNA20551	20551	Proteobacteria	Gammaproteobacteria	3.74923	37.8	-	ABVP01	11	4997	4909	3/12/09	9/16/13	Scaffold	Washington University Genome Sequencing Center	SAMN00000019	GCA_000155835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/835/GCA_000155835.1_ASM15583v1	-	ATCC 35198
Brachybacterium sp. VR2415	2017485	PRJNA392612	392612	Terrabacteria group	Actinobacteria	3.5685	70.4422	chromosome:NZ_CP022316.1/CP022316.1; plasmid unnamed1:NZ_CP022317.1/CP022317.1; plasmid unnamed2:NZ_CP022318.1/CP022318.1	-	3	3214	2871	7/12/17	7/14/17	Complete Genome	Kyung Hee University	SAMN07303506	GCA_002216795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/795/GCA_002216795.1_ASM221679v1	-	VR2415
Ruminococcus torques ATCC 27756	411460	PRJNA18153	18153	Terrabacteria group	Firmicutes	2.74171	42	-	AAVP02	41	2527	2305	2/13/07	4/10/17	Scaffold	Washington University Genome Sequencing Center	SAMN00627104	GCA_000153925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/925/GCA_000153925.1_ASM15392v1	-	ATCC 27756
Blautia obeum ATCC 29174	411459	PRJNA18147	18147	Terrabacteria group	Firmicutes	3.62551	41.6	-	AAVO02	54	3496	3209	2/13/07	4/10/17	Scaffold	Washington University Genome Sequencing Center	SAMN00627103	GCA_000153905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/905/GCA_000153905.1_ASM15390v1	-	ATCC 29174
Tessaracoccus sp. T2.5-30	1909732	PRJNA348670	348670	Terrabacteria group	Actinobacteria	3.2127	70.4	chromosome:NZ_CP019229.1/CP019229.1	-	1	2948	2833	3/7/17	3/11/17	Complete Genome	Centro de Biologia Molecular Severo Ochoa	SAMN05913382	GCA_002022225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/225/GCA_002022225.1_ASM202222v1	-	T2.5-30
Agromyces aureus	453304	PRJNA302856	302856	Terrabacteria group	Actinobacteria	4.37312	70.4	chromosome:NZ_CP013979.1/CP013979.1	-	1	3950	3835	6/9/16	4/17/17	Complete Genome	Austrian Institute of Technology	SAMN04283684	GCA_001660485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/485/GCA_001660485.1_ASM166048v1	27373912	AR33
Actinomyces odontolyticus ATCC 17982	411466	PRJNA18171	18171	Terrabacteria group	Actinobacteria	2.39396	65.4	-	AAYI02	2	2096	2004	3/16/07	4/7/17	Scaffold	Washington University Genome Sequencing Center	SAMN00627054	GCA_000154225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/225/GCA_000154225.1_ASM15422v1	-	ATCC 17982
Pseudoflavonifractor capillosus ATCC 29799	411467	PRJNA18173	18173	Terrabacteria group	Firmicutes	4.24108	59.1	-	AAXG02	65	4001	3816	3/6/07	5/19/17	Contig	Washington University Genome Sequencing Center	SAMN00627059	GCA_000169255.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/255/GCA_000169255.2_ASM16925v2	-	ATCC 29799
[Clostridium] scindens ATCC 35704	411468	PRJNA18175	18175	Terrabacteria group	Firmicutes	3.62261	46.3	-	ABFY02	41	3676	3436	10/3/07	4/10/17	Scaffold	Washington University Genome Sequencing Center	SAMN00627066	GCA_000154505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/505/GCA_000154505.1_ASM15450v1	-	ATCC 35704
[Eubacterium] hallii DSM 3353	411469	PRJNA18177	18177	Terrabacteria group	Firmicutes	3.291	38.2	-	ACEP01	175	2972	2789	2/3/09	4/7/17	Contig	Washington University Genome Sequencing Center	SAMN02415618	GCA_000173975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/975/GCA_000173975.1_ASM17397v1	-	DSM 3353
Ruminococcus gnavus AGR2154	1384063	PRJNA214525	214525	Terrabacteria group	Firmicutes	3.72408	42.5	-	JAGQ01	5	3714	3349	1/14/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02584990	GCA_000526735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/735/GCA_000526735.1_ASM52673v1	-	AGR2154
Subdoligranulum variabile DSM 15176	411471	PRJNA18181	18181	Terrabacteria group	Firmicutes	3.24547	57.9	-	ACBY02	11	3111	2931	2/23/09	4/17/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008862	GCA_000157955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/955/GCA_000157955.1_ASM15795v1	-	DSM 15176
[Clostridium] symbiosum WAL-14163	742740	PRJNA46399	46399	Terrabacteria group	Firmicutes	5.3525	47.7	-	ADLQ01	52	5081	4665	2/14/11	5/18/17	Scaffold	Broad Institute	SAMN02463857	GCA_000189595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/595/GCA_000189595.1_Clos_symb_WAL_14163_V1	-	WAL-14163
Anaerostipes caccae DSM 14662	411490	PRJNA18213	18213	Terrabacteria group	Firmicutes	3.60694	44.3	-	ABAX03	26	3542	3363	5/24/07	4/17/17	Scaffold	Washington University Genome Sequencing Center	SAMN00627053	GCA_000154305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/305/GCA_000154305.1_ASM15430v1	-	DSM 14662
Dorea longicatena DSM 13814	411462	PRJNA18157	18157	Terrabacteria group	Firmicutes	2.91543	41.4	-	AAXB02	36	2800	2635	3/2/07	3/30/17	Scaffold	Washington University Genome Sequencing Center	SAMN00627086	GCA_000154065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/065/GCA_000154065.1_ASM15406v1	-	DSM 13814
Eubacterium ventriosum ATCC 27560	411463	PRJNA18159	18159	Terrabacteria group	Firmicutes	2.8708	34.9	-	AAVL02	27	2611	2455	12/6/06	4/17/17	Scaffold	Washington University Genome Sequencing Center	SAMN00627091	GCA_000153885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/885/GCA_000153885.1_ASM15388v1	-	ATCC 27560
Microbacterium sp. PAMC 28756	1795053	PRJNA310789	310789	Terrabacteria group	Actinobacteria	3.53906	70.4	chromosome:NZ_CP014313.1/CP014313.1	-	1	3397	3301	2/11/16	4/11/17	Complete Genome	Korea Polar Research Institute	SAMN04455696	GCA_001558975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/975/GCA_001558975.1_ASM155897v1	-	HSR44
Actinoplanes friuliensis DSM 7358	1246995	PRJNA178199	178199	Terrabacteria group	Actinobacteria	9.37607	70.4	chromosome:NC_022657.1/CP006272.1	-	1	8694	8436	11/1/13	4/17/17	Complete Genome	Bielefeld University	SAMN02603031	GCA_000494755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/755/GCA_000494755.1_ASM49475v1	24637369	DSM 7358
Curtobacterium pusillum	69373	PRJNA357031	357031	Terrabacteria group	Actinobacteria	4.54105	70.3753	chromosome:NZ_CP018783.1/CP018783.1; plasmid pCPAA3:NZ_CP018784.1/CP018784.1	-	2	4550	4394	3/13/17	3/15/17	Complete Genome	Harvard University	SAMN06130961	GCA_002025645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/645/GCA_002025645.1_ASM202564v1	28275097	AA3
[Clostridium] bolteae 90A9	997894	PRJNA64847	64847	Terrabacteria group	Firmicutes	6.37738	49.6	-	AGYH01	1	5892	5744	4/19/13	5/19/17	Scaffold	Broad Institute	SAMN02596758	GCA_000371705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/705/GCA_000371705.1_Clos_bolt_90A9_V1	-	90A9
Collinsella aerofaciens ATCC 25986	411903	PRJNA18167	18167	Terrabacteria group	Actinobacteria	2.43987	60.5	-	AAVN02	25	2175	2040	1/3/07	4/10/17	Contig	Washington University Genome Sequencing Center	SAMN00627067	GCA_000169035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/035/GCA_000169035.1_ASM16903v1	-	ATCC 25986
Parabacteroides merdae ATCC 43184	411477	PRJNA18193	18193	FCB group	Bacteroidetes/Chlorobi group	4.43438	45.3	-	AAXE02	93	3753	3473	3/6/07	6/12/17	Scaffold	Washington University Genome Sequencing Center	SAMN00627057	GCA_000154105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/105/GCA_000154105.1_ASM15410v1	-	ATCC 43184
Bacteroides uniformis ATCC 8492	411479	PRJNA18195	18195	FCB group	Bacteroidetes/Chlorobi group	4.7191	46.4	-	AAYH02	33	3957	3746	3/16/07	5/18/17	Scaffold	Washington University Genome Sequencing Center	SAMN00627060	GCA_000154205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/205/GCA_000154205.1_ASM15420v1	-	ATCC 8492
Dokdonella koreensis DS-123	1300342	PRJNA191951	191951	Proteobacteria	Gammaproteobacteria	4.44662	70.3	chromosome:NZ_CP015249.1/CP015249.1	-	1	3615	3519	4/27/16	4/17/17	Complete Genome	Yonsei University	SAMN04631807	GCA_001632775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/775/GCA_001632775.1_ASM163277v1	-	DS-123
Microbacterium testaceum StLB037	979556	PRJDA62249	62249	Terrabacteria group	Actinobacteria	3.98203	70.3	chromosome:NC_015125.1/AP012052.1	-	1	3645	3551	2/11/11	3/30/17	Complete Genome	Utsunomiya University	SAMD00060982	GCA_000202635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/202/635/GCA_000202635.1_ASM20263v1	21357489	StLB037
Leifsonia xyli	1575	PRJNA314938	314938	Terrabacteria group	Actinobacteria	3.59676	70.2	chromosome:NZ_CP014761.1/CP014761.1	-	1	3540	3268	5/19/16	4/12/17	Complete Genome	KNU	SAMN04545529	GCA_001647635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/635/GCA_001647635.1_ASM164763v1	-	SE134
Deinococcus soli Cha et al. 2016	1309411	PRJNA272874	272874	Terrabacteria group	Deinococcus-Thermus	3.23698	70.2	chromosome:NZ_CP011389.1/CP011389.1	-	1	3146	3055	5/15/15	4/6/17	Complete Genome	Seoul Women's University	SAMN03287573	GCA_001007995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/995/GCA_001007995.1_ASM100799v1	-	N5
Ruminococcus callidus ATCC 27760	411473	PRJNA18185	18185	Terrabacteria group	Firmicutes	3.09649	49	-	AWVF01	226	2824	2639	9/16/13	4/17/17	Scaffold	Washington University Genome Sequencing Center	SAMN00627105	GCA_000468015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/015/GCA_000468015.1_ASM46801v1	-	ATCC 27760
Coprococcus eutactus ATCC 27759	411474	PRJNA18187	18187	Terrabacteria group	Firmicutes	3.10299	43.1	-	ABEY02	23	2717	2595	9/10/07	4/7/17	Scaffold	Washington University Genome Sequencing Center	SAMN00627069	GCA_000154425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/425/GCA_000154425.1_ASM15442v1	-	ATCC 27759
Bacteroides stercoris ATCC 43183	449673	PRJNA19859	19859	FCB group	Bacteroidetes/Chlorobi group	4.00983	45.8	-	ABFZ02	17	3428	3257	10/3/07	4/7/17	Scaffold	Washington University Genome Sequencing Center	SAMN00000004	GCA_000154525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/525/GCA_000154525.1_ASM15452v1	-	ATCC 43183
Pseudoxanthomonas suwonensis	314722	PRJNA280019	280019	Proteobacteria	Gammaproteobacteria	3.89172	70.2	chromosome:NZ_CP011144.1/CP011144.1	-	1	3267	3189	4/16/15	4/10/17	Complete Genome	BioInformatics Center	SAMN03453605	GCA_000972865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/865/GCA_000972865.1_ASM97286v1	26067962	J1
Pseudoxanthomonas suwonensis 11-1	743721	PRJNA48619	48619	Proteobacteria	Gammaproteobacteria	3.41905	70.2	chromosome:NC_014924.1/CP002446.1	-	1	3133	3043	1/12/11	4/7/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713577	GCA_000185965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/965/GCA_000185965.1_ASM18596v1	-	1-Nov
Roseomonas gilardii	257708	PRJNA320863	320863	Proteobacteria	Alphaproteobacteria	5.41246	70.119	chromosome 1:NZ_CP015583.1/CP015583.1; chromosome 2:NZ_CP015584.1/CP015584.1; plasmid 1:NZ_CP015585.1/CP015585.1; plasmid 2:NZ_CP015586.1/CP015586.1; plasmid 3:NZ_CP015587.1/CP015587.1	-	5	4892	4737	1/6/17	4/17/17	Complete Genome	New England Biolabs	SAMN04958682	GCA_001941945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/945/GCA_001941945.1_ASM194194v1	-	U14-5
Actinoalloteichus sp. ADI127-7	1612552	PRJNA275157	275157	Terrabacteria group	Actinobacteria	7.12085	70.1	chromosome:NZ_CP016076.1/CP016076.1	-	1	6102	5863	1/10/17	4/17/17	Complete Genome	Bielefeld University	SAMN03339750	GCA_001941625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/625/GCA_001941625.1_ASM194162v1	-	ADI127-7
Microbacterium paludicola	300019	PRJNA353763	353763	Terrabacteria group	Actinobacteria	3.41083	70.1	chromosome:NZ_CP018134.1/CP018134.1	-	1	3219	3120	11/29/16	4/17/17	Complete Genome	Jiangsu Normal University	SAMN06019996	GCA_001887285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/285/GCA_001887285.1_ASM188728v1	-	CC3
Frankia casuarinae	106370	PRJNA13963	13963	Terrabacteria group	Actinobacteria	5.43363	70.1	chromosome:NC_007777.1/CP000249.1	-	1	4734	4353	2/6/06	8/28/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02199398	GCA_000013345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/345/GCA_000013345.1_ASM1334v1	17151343	CcI3
Actinoalloteichus sp. GBA129-24	1612551	PRJNA275159	275159	Terrabacteria group	Actinobacteria	7.27538	70.0927	chromosome:NZ_CP016077.1/CP016077.1; plasmid pGBA129-24a:NZ_CP016078.1/CP016078.1	-	2	6302	6060	1/10/17	4/17/17	Complete Genome	Bielefeld University	SAMN03339751	GCA_001941645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/645/GCA_001941645.1_ASM194164v1	-	GBA129-24
Lentzea guizhouensis	1586287	PRJNA328305	328305	Terrabacteria group	Actinobacteria	9.99787	70	chromosome:NZ_CP016793.1/CP016793.1	-	1	9503	8887	8/9/16	4/13/17	Complete Genome	Jiangsu normal university	SAMN05369592	GCA_001701025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/025/GCA_001701025.1_ASM170102v1	-	DHS C013
Rhodococcus sp. PBTS 1	1653478	PRJNA313428	313428	Terrabacteria group	Actinobacteria	4.25169	70	chromosome:NZ_CP015219.1/CP015219.1	-	1	3918	3793	4/13/16	4/12/17	Complete Genome	New Mexico State University	SAMN04519624	GCA_001620025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/025/GCA_001620025.1_ASM162002v1	27284129	PBTS 1
Myxococcus fulvus 124B02	1334629	PRJNA203240	203240	Proteobacteria	delta/epsilon subdivisions	11.0488	70	chromosome:NZ_CP006003.1/CP006003.1	-	1	8753	8460	5/6/15	4/10/17	Complete Genome	"State Key Laboratory of Microbial Technology, College of Life Science, Shandong University"	SAMN03609916	GCA_000988565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/565/GCA_000988565.1_ASM98856v1	26734118	124B02
Ramlibacter tataouinensis TTB310	365046	PRJNA16294	16294	Proteobacteria	Betaproteobacteria	4.07019	70	chromosome:NC_015677.1/CP000245.1	-	1	3960	3845	6/3/11	4/7/17	Complete Genome	CEA-CNRS	SAMN02603053	GCA_000215705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/705/GCA_000215705.1_ASM21570v1	21912644	TTB310
Microbacterium chocolatum	84292	PRJNA321797	321797	Terrabacteria group	Actinobacteria	3.16863	69.988	chromosome:NZ_CP015810.1/CP015810.1; plasmid 1:NZ_CP015811.1/CP015811.1; plasmid 2:NZ_CP015812.1/CP015812.1; plasmid 3:NZ_CP015813.1/CP015813.1	-	4	3044	2881	5/26/16	4/12/17	Complete Genome	Shanghai Institution of Technology	SAMN05003931	GCA_001652465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/465/GCA_001652465.1_ASM165246v1	-	SIT 101
Frankia symbiont of Datisca glomerata	656024	PRJNA39113	39113	Terrabacteria group	Actinobacteria	5.34099	69.9675	chromosome:NC_015656.1/CP002801.1; plasmid pFSYMDG01:NC_015664.1/CP002802.1; plasmid pFSYMDG02:NC_015657.1/CP002803.1	-	3	4534	4144	6/6/11	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713636	GCA_000177615.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/615/GCA_000177615.2_ASM17761v2	-	4085684
Streptomyces pluripotens	1355015	PRJNA261098	261098	Terrabacteria group	Actinobacteria	7.58657	69.9	chromosome:NZ_CP022433.1/CP022433.1	-	1	6670	6197	7/17/17	7/28/17	Complete Genome	University of Malaya	SAMN03070122	GCA_000816465.4	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/465/GCA_000816465.4_ASM81646v4	-	MUSC 137
Streptomyces pluripotens	1355015	PRJNA261097	261097	Terrabacteria group	Actinobacteria	7.34607	69.9	chromosome:NZ_CP021080.1/CP021080.1	-	1	6485	6014	5/2/17	5/22/17	Complete Genome	University of Malaya	SAMN03070117	GCA_000802245.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/245/GCA_000802245.2_ASM80224v2	-	MUSC 135
Microbacterium aurum	36805	PRJNA353137	353137	Terrabacteria group	Actinobacteria	3.42489	69.9	chromosome:NZ_CP018762.1/CP018762.1	-	1	3274	3095	1/30/17	4/17/17	Complete Genome	Kyungpook National University	SAMN06010969	GCA_001974985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/974/985/GCA_001974985.1_ASM197498v1	-	KACC 15219
Corallococcus coralloides DSM 2259	1144275	PRJNA82779	82779	Proteobacteria	delta/epsilon subdivisions	10.0806	69.9	chromosome:NC_017030.1/CP003389.1	-	1	8115	7903	3/20/12	5/18/17	Complete Genome	Max Planck Institute for Terrestrial Microbiology	SAMN02603593	GCA_000255295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/295/GCA_000255295.1_ASM25529v1	22582372	DSM 2259
Methylobacterium oryzae CBMB20	693986	PRJNA41901	41901	Proteobacteria	Alphaproteobacteria	6.28663	69.8	chromosome:CP003811.1	-	1	6343	6274	9/25/14	9/25/14	Complete Genome	KRIBB	SAMN03075686	GCA_000757795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/795/GCA_000757795.1_ASM75779v1	-	CBMB20
Deinococcus maricopensis DSM 21211	709986	PRJNA43461	43461	Terrabacteria group	Deinococcus-Thermus	3.49853	69.8	chromosome:NC_014958.1/CP002454.1	-	1	3333	3242	1/20/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713579	GCA_000186385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/385/GCA_000186385.1_ASM18638v1	21677853	DSM 21211
Catenulispora acidiphila DSM 44928	479433	PRJNA21085	21085	Terrabacteria group	Actinobacteria	10.4678	69.8	chromosome:NC_013131.1/CP001700.1	-	1	9052	8775	8/21/09	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598445	GCA_000024025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/025/GCA_000024025.1_ASM2402v1	21304647	DSM 44928
Oceanithermus profundus DSM 14977	670487	PRJNA40223	40223	Terrabacteria group	Deinococcus-Thermus	2.43929	69.7891	chromosome:NC_014761.1/CP002361.1; plasmid pOCEPR01:NC_014753.1/CP002362.1	-	2	2427	2360	12/2/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00138957	GCA_000183745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/745/GCA_000183745.1_ASM18374v1	21677858	DSM 14977
Nocardiopsis gilva YIM 90087	1235441	PRJNA389619	389619	Terrabacteria group	Actinobacteria	6.14215	69.7	chromosome:NZ_CP022753.1/CP022753.1	-	1	5396	5082	8/22/17	8/24/17	Complete Genome	school of medicine	SAMN07203979	GCA_002263495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/495/GCA_002263495.1_ASM226349v1	-	YIM 90087
Rhizobacter gummiphilus	946333	PRJNA317608	317608	Proteobacteria	Betaproteobacteria	6.3981	69.7	chromosome:NZ_CP015118.1/CP015118.1	-	1	5870	5748	5/2/17	5/6/17	Complete Genome	Nagaoka University of Technology	SAMN04621830	GCA_002116905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/116/905/GCA_002116905.1_ASM211690v1	-	NS21
Limnochorda pilosa	1555112	PRJDB4026	293612	Terrabacteria group	Firmicutes	3.81704	69.7	chromosome Unknown:NZ_AP014924.1/AP014924.1	-	1	3538	3432	8/21/15	6/7/17	Complete Genome	The Institute of Low Temperature Science	SAMD00034894	GCA_001544015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/015/GCA_001544015.1_ASM154401v1	-	HC45
Alloactinosynnema sp. L-07	1653480	PRJEB9335	290242	Terrabacteria group	Actinobacteria	7.40511	69.6	chromosome I:NZ_LN850107.1/LN850107.1	-	1	6875	6644	7/14/15	4/12/17	Complete Genome	National Center for Genome Resources (NCGR)	SAMEA3392348	GCA_900070365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/070/365/GCA_900070365.1_Alloactinosynnema_sp._L-07	-	L-07
Nocardiopsis alba ATCC BAA-2165	1205910	PRJNA169662	169662	Terrabacteria group	Actinobacteria	5.84821	69.6	chromosome:NC_018524.1/CP003788.1	-	1	5103	4822	9/4/12	5/19/17	Complete Genome	Ohio University	SAMN02603688	GCA_000294515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/515/GCA_000294515.1_ASM29451v1	23105086	ATCC BAA-2165
Methylobacterium phyllosphaerae	418223	PRJNA309452	309452	Proteobacteria	Alphaproteobacteria	6.31662	69.5555	chromosome:NZ_CP015367.1/CP015367.1; plasmid CBMB27-p1:NZ_CP015368.1/CP015368.1; plasmid CBMB27-p2:NZ_CP015369.1/CP015369.1; plasmid CBMB27-p3:NZ_CP015370.1/CP015370.1	-	4	5722	5506	1/5/17	4/17/17	Complete Genome	Chungbuk National University	SAMN04433067	GCA_001936175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/175/GCA_001936175.1_ASM193617v1	-	CBMB27
Rathayibacter tritici	33888	PRJNA319877	319877	Terrabacteria group	Actinobacteria	3.35468	69.5	chromosome:NZ_CP015515.1/CP015515.1	-	1	3154	2995	5/9/16	4/17/17	Complete Genome	Pusan National University	SAMN04910036	GCA_001641005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/005/GCA_001641005.1_ASM164100v1	-	NCPPB 1953
Haliangium ochraceum DSM 14365	502025	PRJNA28711	28711	Proteobacteria	delta/epsilon subdivisions	9.44631	69.5	chromosome:NC_013440.1/CP001804.1	-	1	6896	6649	10/27/09	9/20/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002596	GCA_000024805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/805/GCA_000024805.1_ASM2480v1	21304682	DSM 14365
Salinispora arenicola CNS-205	391037	PRJNA17109	17109	Terrabacteria group	Actinobacteria	5.78636	69.5	chromosome:NC_009953.1/CP000850.1	-	1	5175	4909	10/5/07	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598378	GCA_000018265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/265/GCA_000018265.1_ASM1826v1	-	CNS-205
Salinispora tropica CNB-440	369723	PRJNA16342	16342	Terrabacteria group	Actinobacteria	5.18333	69.5	chromosome:NC_009380.1/CP000667.1	-	1	4778	4522	4/17/07	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598367	GCA_000016425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/425/GCA_000016425.1_ASM1642v1	19590008	CNB-440
Thermus thermophilus HB8	300852	PRJNA13202	13202	Terrabacteria group	Deinococcus-Thermus	2.11606	69.4857	chromosome:NC_006461.1/AP008226.1; plasmid pTT27:NC_006462.1/AP008227.1; plasmid pTT8:NC_006463.1/AP008228.1	-	3	2245	2173	11/16/04	10/7/16	Complete Genome	"National Institute of Advanced Industrial Science and Technology, Japan"	SAMD00061070	GCA_000091545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/091/545/GCA_000091545.1_ASM9154v1	-	HB8
Lysobacter enzymogenes	69	PRJDB3483	354989	Proteobacteria	Gammaproteobacteria	6.09602	69.4	chromosome:AP014940.1	-	1	4952	4891	11/25/16	11/25/16	Complete Genome	Japan Agency for Marine-Earth Science and Technology	SAMD00025316	GCA_002355975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/975/GCA_002355975.1_ASM235597v1	-	M497-1
Mycobacterium phlei	1771	PRJNA311273	311273	Terrabacteria group	Actinobacteria	5.34964	69.4	chromosome:NZ_CP014475.1/CP014475.1	-	1	5145	4943	3/8/16	4/12/17	Complete Genome	Uppsala University	SAMN04481318	GCA_001583415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/415/GCA_001583415.1_ASM158341v1	26941228	CCUG 21000
Microbacterium sp. XT11	367477	PRJNA286063	286063	Terrabacteria group	Actinobacteria	3.47532	69.4	chromosome:NZ_CP013859.1/CP013859.1	-	1	3356	3241	1/12/16	4/16/17	Complete Genome	Dalian Polytechnic University	SAMN03761181	GCA_001513675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/675/GCA_001513675.1_ASM151367v1	-	XT11
Archangium gephyra	48	PRJNA283574	283574	Proteobacteria	delta/epsilon subdivisions	12.4894	69.4	chromosome:NZ_CP011509.1/CP011509.1	-	1	9927	9561	6/3/15	4/10/17	Complete Genome	IMTECH-CSIR	SAMN03704078	GCA_001027285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/285/GCA_001027285.1_ASM102728v1	-	DSM 2261
Thermus thermophilus HB27	262724	PRJNA10617	10617	Terrabacteria group	Deinococcus-Thermus	2.12748	69.3781	chromosome:NC_005835.1/AE017221.1; plasmid pTT27:NC_005838.1/AE017222.1	-	2	2276	2126	4/5/04	4/6/17	Complete Genome	Gottingen Genomics Laboratory	SAMN02603291	GCA_000008125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/125/GCA_000008125.1_ASM812v1	15064768	HB27
Methylobacterium populi BJ001	441620	PRJNA19559	19559	Proteobacteria	Alphaproteobacteria	5.849	69.3702	chromosome:NC_010725.1/CP001029.1; plasmid pMPOP01:NC_010727.1/CP001030.1; plasmid pMPOP02:NC_010721.1/CP001031.1	-	3	5480	5289	4/9/08	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000038	GCA_000019945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/945/GCA_000019945.1_ASM1994v1	-	BJ001
Mycobacterium avium subsp. paratuberculosis	1770	PRJNA231221	231221	Terrabacteria group	Actinobacteria	4.83227	69.3	chromosome:NZ_CP022095.1/CP022095.1	-	1	4560	4197	6/27/17	6/29/17	Complete Genome	US Food and Drug Administration 	SAMN06173318	GCA_002208705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/705/GCA_002208705.1_ASM220870v1	-	FDAARGOS_305
Mycobacterium avium	1764	PRJNA305474	305474	Terrabacteria group	Actinobacteria	4.95361	69.3	chromosome:NZ_CP016396.1/CP016396.1	-	1	4647	4435	7/11/16	4/5/17	Complete Genome	Sichuan Agricultural University	SAMN04325949	GCA_001683455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/455/GCA_001683455.1_ASM168345v1	-	RCAD0278
Mycobacterium avium subsp. paratuberculosis	1770	PRJNA314834	314834	Terrabacteria group	Actinobacteria	4.82978	69.3	chromosome:NZ_CP015495.1/CP015495.1	-	1	4553	4300	5/27/16	4/5/17	Complete Genome	Tamilnadu Veterinary and Animal Sciences University	SAMN04544372	GCA_001653355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/355/GCA_001653355.1_ASM165335v1	-	MAP/TANUVAS/TN/India/2008
Mycobacterium avium subsp. paratuberculosis	1770	PRJNA269152	269152	Terrabacteria group	Actinobacteria	4.781	69.3	chromosome:NZ_CP010113.1/CP010113.1	-	1	4556	4150	2/10/15	4/3/17	Complete Genome	University of Wisconsin-Madison	SAMN03252100	GCA_000835225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/835/225/GCA_000835225.1_ASM83522v1	25667007	E1
Mycobacterium avium subsp. paratuberculosis	1770	PRJNA269152	269152	Terrabacteria group	Actinobacteria	4.78606	69.3	chromosome:NZ_CP010114.1/CP010114.1	-	1	4559	4223	2/10/15	4/3/17	Complete Genome	University of Wisconsin-Madison	SAMN03252736	GCA_000835265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/835/265/GCA_000835265.1_ASM83526v1	25667007	E93
Mycobacterium avium subsp. paratuberculosis MAP4	1199187	PRJNA168471	168471	Terrabacteria group	Actinobacteria	4.82942	69.3	chromosome:NC_021200.1/CP005928.1	-	1	4552	4327	5/9/13	4/1/17	Complete Genome	Penn State University	SAMN02603716	GCA_000390085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/085/GCA_000390085.1_ASM39008v1	24503996	MAP4
Mycobacterium avium subsp. paratuberculosis K-10	262316	PRJNA91	91	Terrabacteria group	Actinobacteria	4.82978	69.3	chromosome:NC_002944.2/AE016958.1	-	1	4562	4311	12/27/01	5/19/17	Complete Genome	Univ. Minnesota	SAMN02604086	GCA_000007865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/865/GCA_000007865.1_ASM786v1	16116077	K-10
Planctomyces sp. SH-PL62	1636152	PRJNA277747	277747	PVC group	Planctomycetes	6.78466	69.2718	chromosome:NZ_CP011273.1/CP011273.1; plasmid pPL62-1:NZ_CP011274.1/CP011274.1; plasmid pPL62-2:NZ_CP011275.1/CP011275.1; plasmid pPL62-3:NZ_CP011276.1/CP011276.1; plasmid pPL62-4:NZ_CP011277.1/CP011277.1	-	5	5282	5004	4/5/16	4/12/17	Complete Genome	NIOO-KNAW	SAMN03417853	GCA_001610895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/895/GCA_001610895.1_ASM161089v1	-	SH-PL62
Myxococcus hansupus	1297742	PRJNA167109	167109	Proteobacteria	delta/epsilon subdivisions	9.49043	69.2	chromosome:NZ_CP012109.1/CP012109.1	-	1	7582	7213	7/16/15	4/10/17	Complete Genome	Institute of Microbial Technology	SAMN02469988	GCA_000280925.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/925/GCA_000280925.3_ASM28092v3	26900859	mixupus
Mycobacterium avium subsp. avium 2285 (S)	1299329	PRJNA260408	260408	Terrabacteria group	Actinobacteria	5.19766	69.2	chromosome:NZ_CP009482.1/CP009482.1	-	1	4909	4643	9/26/14	4/3/17	Complete Genome	BEI Resources/American Type	SAMN03067429	GCA_000831285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/285/GCA_000831285.1_ASM83128v1	-	2285 (S)
Myxococcus stipitatus DSM 14675	1278073	PRJNA185255	185255	Proteobacteria	delta/epsilon subdivisions	10.3506	69.2	chromosome:NC_020126.1/CP004025.1	-	1	8143	7879	1/14/13	5/19/17	Complete Genome	Max Planck Institute for Terrrestrial Microbiology	SAMN02603594	GCA_000331735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/735/GCA_000331735.1_ASM33173v1	23516218	DSM 14675
Mycobacterium avium subsp. hominissuis TH135	1229671	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.14593	69.1941	chromosome:NZ_AP012555.1/AP012555.1; plasmid pMAH135:NZ_AP012556.1/AP012556.1	-	2	4790	4625	6/1/13	4/3/17	Complete Genome	Meijo University faculty of pharmacy	SAMD00061038	GCA_000829075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/075/GCA_000829075.1_ASM82907v1	23990995	TH135
Deinococcus gobiensis I-0	745776	PRJNA46605	46605	Terrabacteria group	Deinococcus-Thermus	4.40604	69.1514	chromosome:NC_017790.1/CP002191.1; plasmid P1:NC_017805.1/CP002192.1; plasmid P2:NC_017791.1/CP002193.1; plasmid P3:NC_017771.1/CP002194.1; plasmid P4:NC_017792.1/CP002195.1; plasmid P5:NC_017806.1/CP002196.1; plasmid P6:NC_017793.1/CP002197.1	-	7	4320	4140	3/12/12	5/18/17	Complete Genome	"Biotechnology Research Institute,  the Chinese Academy of Agricultural Sciences"	SAMN02603039	GCA_000252445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/445/GCA_000252445.1_ASM25244v1	22470573	I-0
Rhodobacter sphaeroides KD131	557760	PRJNA31111	31111	Proteobacteria	Alphaproteobacteria	4.71114	69.1055	chromosome 1:NC_011963.1/CP001150.1; chromosome 2:NC_011958.1/CP001151.1; plasmid pRSKD131A:NC_011962.1/CP001152.1; plasmid pRSKD131B:NC_011960.1/CP001153.1	-	4	4530	4367	1/22/09	5/19/17	Complete Genome	GenoTech corp.	SAMN02603252	GCA_000021005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/005/GCA_000021005.1_ASM2100v1	19028901	KD131; KCTC 12085
Minicystis rosea	888845	PRJNA321464	321464	Proteobacteria	delta/epsilon subdivisions	16.0407	69.1	chromosome:CP016211.1	-	1	14117	14018	1/4/17	1/4/17	Complete Genome	IMTECH-CSIR	SAMN05017598	GCA_001931535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/535/GCA_001931535.1_ASM193153v1	-	DSM 24000
Mycobacterium avium subsp. avium	44454	PRJNA263498	263498	Terrabacteria group	Actinobacteria	5.01126	69.1	chromosome:NZ_CP009614.1/CP009614.1	-	1	4736	4441	10/31/14	4/2/17	Complete Genome	BEI Resources/American Type	SAMN03103573	GCA_000770235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/235/GCA_000770235.1_ASM77023v1	-	DJO-44271
Mycobacterium avium subsp. avium 2285 (R)	1299330	PRJNA260407	260407	Terrabacteria group	Actinobacteria	5.16941	69.1	chromosome:NZ_CP009493.1/CP009493.1	-	1	4904	4636	9/26/14	4/2/17	Complete Genome	BEI Resources/American Type	SAMN03067428	GCA_000758285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/285/GCA_000758285.1_ASM75828v1	-	2285 (R)
Methylobacterium populi	223967	PRJDB3447	320372	Proteobacteria	Alphaproteobacteria	5.94388	69.0235	chromosome:AP014809.1; plasmid pMPPM01:AP014810.1; plasmid pMPPM02:AP014811.1; plasmid pMPPM03:AP014812.1; plasmid pMPPM04:AP014813.1; plasmid pMPPM05:AP014814.1	-	6	5712	5638	4/29/16	6/25/16	Complete Genome	"Department of Material and Environmental Chemistry, Graduate School of Engineering, Utsunomiya University"	SAMD00024749	GCA_002355515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/515/GCA_002355515.1_ASM235551v1	-	P-1M
Dermacoccus nishinomiyaensis	1274	PRJNA253981	253981	Terrabacteria group	Actinobacteria	3.11364	69.0185	chromosome:NZ_CP008889.1/CP008889.1; plasmid unnamed:NZ_CP008890.1/CP008890.1	-	2	2821	2676	7/14/14	4/9/17	Complete Genome	University of Malaya	SAMN02902417	GCA_000725405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/405/GCA_000725405.1_ASM72540v1	-	M25
Mycobacterium lepraemurium	64667	PRJNA384500	384500	Terrabacteria group	Actinobacteria	4.05052	69	chromosome:CP021238.1	-	1	3870	2682	9/12/17	9/12/17	Complete Genome	Ecole Polytechnique Federale de Lausanne	SAMN06841017	GCA_002291465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/465/GCA_002291465.1_ASM229146v1	-	Hawaii
Mycobacterium thermoresistibile	1797	PRJEB6403	251923	Terrabacteria group	Actinobacteria	4.95069	69	chromosome 1:NZ_LT906483.1/LT906483.1	-	1	4693	4505	8/15/17	8/28/17	Complete Genome	SC	SAMEA4412656	GCA_900187065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/065/GCA_900187065.1_50465_H02	-	NCTC10409
Rhodococcus sp. MTM3W5.2	1805827	PRJNA357717	357717	Terrabacteria group	Actinobacteria	5.66508	69	chromosome:NZ_CP019572.1/CP019572.1	-	1	5165	4272	2/3/17	4/17/17	Complete Genome	East Tennessee State University	SAMN06160711	GCA_001984015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/015/GCA_001984015.1_ASM198401v1	-	MTM3W5.2
Mycobacterium avium 104	243243	PRJNA88	88	Terrabacteria group	Actinobacteria	5.47549	69	chromosome:NC_008595.1/CP000479.1	-	1	5199	4894	11/20/06	5/19/17	Complete Genome	TIGR	SAMN02603981	GCA_000014985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/985/GCA_000014985.1_ASM1498v1	-	104
Amycolatopsis orientalis HCCB10007	1156913	PRJNA85603	85603	Terrabacteria group	Actinobacteria	8.98209	68.9996	chromosome:NC_021252.1/CP003410.1; plasmid pXL100:NC_023497.1/CP003411.1	-	2	8235	8078	5/20/13	4/9/17	Complete Genome	Shanghai institute of pharmaceutical industry	SAMN02603859	GCA_000400635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/635/GCA_000400635.2_ASM40063v2	23627759	HCCB10007
Thermus thermophilus	274	PRJDB5285	355261	Terrabacteria group	Deinococcus-Thermus	2.14066	68.9857	chromosome:AP017920.1; plasmid pTMY:AP017921.1	-	2	2581	2529	11/26/16	11/26/16	Complete Genome	Kyushu University	SAMD00066626	GCA_002355995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/995/GCA_002355995.1_ASM235599v1	-	TMY
Thermus thermophilus JL-18	798128	PRJNA66077	66077	Terrabacteria group	Deinococcus-Thermus	2.31121	68.9816	chromosome:NC_017587.1/CP003252.1; plasmid pTTJL1801:NC_017588.1/CP003253.1; plasmid pTTJL1802:NC_017590.1/CP003254.1	-	3	2521	2379	4/9/12	4/7/17	Complete Genome	JGI	SAMN02261423	GCA_000258245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/245/GCA_000258245.1_ASM25824v1	23405355	JL-18
Rhodobacter sphaeroides ATCC 17029	349101	PRJNA15754	15754	Proteobacteria	Alphaproteobacteria	4.48938	68.9779	chromosome 1:NC_009049.1/CP000577.1; chromosome 2:NC_009050.1/CP000578.1; plasmid pRSPH01:NC_009040.1/CP000579.1	-	3	4338	4176	2/23/07	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598340	GCA_000015985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/985/GCA_000015985.1_ASM1598v1	-	-
Xanthomonas sacchari	56458	PRJNA271115	271115	Proteobacteria	Gammaproteobacteria	5.00611	68.961	chromosome:NZ_CP010409.1/CP010409.1; plasmid unnamed:NZ_CP010410.1/CP010410.1	-	2	4184	3874	1/6/15	4/10/17	Complete Genome	China National Rice Research Institute	SAMN03273272	GCA_000815185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/185/GCA_000815185.1_ASM81518v1	-	R1
Xanthomonas citri pv. mangiferaeindicae	454594	PRJNA336081	336081	Proteobacteria	Gammaproteobacteria	3.86517	68.9	chromosome:CP016836.1	-	1	3374	3173	8/3/17	8/3/17	Complete Genome	"Southern Subtropical Crops Research Institute, Chinese Academy of Tropical Agricultural Sciences, Zh"	SAMN05504068	GCA_002240395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/395/GCA_002240395.1_ASM224039v1	-	XC01
Vulgatibacter incomptus	1391653	PRJNA291649	291649	Proteobacteria	delta/epsilon subdivisions	4.35055	68.9	chromosome:NZ_CP012332.1/CP012332.1	-	1	3643	3494	8/7/15	4/11/17	Complete Genome	IMTECH-CSIR	SAMN03951128	GCA_001263175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/175/GCA_001263175.1_ASM126317v1	-	DSM 27710
Castellaniella defragrans 65Phen	1437824	PRJEB5080	239972	Proteobacteria	Betaproteobacteria	3.95282	68.9	chromosome I:NZ_HG916765.1/HG916765.1	-	1	3592	3428	2/28/14	4/17/17	Complete Genome	MAX-PLANCK-INSTITUTE FOR MARINE MICROBIOLOGY	SAMEA3138971	GCA_000612685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/685/GCA_000612685.1_scf7180000000004	24952578	65Phen
Leptothrix cholodnii SP-6	395495	PRJNA20039	20039	Proteobacteria	Betaproteobacteria	4.9094	68.9	chromosome:NC_010524.1/CP001013.1	-	1	4417	4300	3/25/08	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598429	GCA_000019785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/785/GCA_000019785.1_ASM1978v1	-	SP-6
Myxococcus xanthus DK 1622	246197	PRJNA1421	1421	Proteobacteria	delta/epsilon subdivisions	9.13976	68.9	chromosome:NC_008095.1/CP000113.1	-	1	7348	7181	6/7/06	5/19/17	Complete Genome	TIGR	SAMN02604018	GCA_000012685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/685/GCA_000012685.1_ASM1268v1	17015832	DK 1622
Amycolatopsis japonica	208439	PRJNA251529	251529	Terrabacteria group	Actinobacteria	9.05386	68.8928	chromosome:NZ_CP008953.1/CP008953.1; plasmid pAmyja1:NZ_CP008954.1/CP008954.1	-	2	8527	8336	7/24/14	4/17/17	Complete Genome	Bielefeld University	SAMN02836828	GCA_000732925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/925/GCA_000732925.1_ASM73292v1	25193710	MG417-CF17
Actinopolyspora erythraea	414996	PRJNA389211	389211	Terrabacteria group	Actinobacteria	5.24393	68.8	chromosome:NZ_CP022752.1/CP022752.1	-	1	4627	4395	8/22/17	8/24/17	Complete Genome	school of medicine	SAMN07192573	GCA_002263515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/515/GCA_002263515.1_ASM226351v1	-	YIM 90600
Tessaracoccus sp. NSG39	1332264	PRJNA362682	362682	Terrabacteria group	Actinobacteria	3.9347	68.8	chromosome:NZ_CP019606.1/CP019606.1	-	1	3585	3295	2/14/17	2/22/17	Complete Genome	Kyung Hee University	SAMN06240846	GCA_001997345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/345/GCA_001997345.1_ASM199734v1	-	NSG39
Acidipropionibacterium acidipropionici	1748	PRJNA301197	301197	Terrabacteria group	Actinobacteria	3.64546	68.8	chromosome:NZ_CP019400.1/CP019400.1	-	1	3325	3164	1/30/17	4/17/17	Complete Genome	Propionibacterium acidipropionici	SAMN04230715	GCA_001975205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/205/GCA_001975205.1_ASM197520v1	-	WSH1105
Mycobacterium avium subsp. hominissuis	439334	PRJNA356305	356305	Terrabacteria group	Actinobacteria	5.62662	68.8	chromosome:NZ_CP018363.1/CP018363.1	-	1	5276	4955	1/5/17	6/14/17	Complete Genome	National Jewish Health	SAMN06111833	GCA_001936215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/215/GCA_001936215.1_ASM193621v1	-	H87
Amycolatopsis orientalis	31958	PRJNA271322	271322	Terrabacteria group	Actinobacteria	9.49099	68.8	chromosome:NZ_CP016174.1/CP016174.1	-	1	8414	8227	6/22/16	4/13/17	Complete Genome	"Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences and Peking Union Medical College"	SAMN03273949	GCA_000943515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/515/GCA_000943515.2_ASM94351v2	25977416	B-37
Acidipropionibacterium acidipropionici	1748	PRJNA300904	300904	Terrabacteria group	Actinobacteria	3.65138	68.8	chromosome:NZ_CP013126.1/CP013126.1	-	1	3339	3176	11/9/15	4/11/17	Complete Genome	Propionibacterium acidipropionici	SAMN04230714	GCA_001441165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/165/GCA_001441165.1_ASM144116v1	-	CGMCC 1.2230
Acidipropionibacterium acidipropionici ATCC 4875	1171373	PRJNA158149	158149	Terrabacteria group	Actinobacteria	3.65617	68.8	chromosome:NC_019395.1/CP003493.1	-	1	3366	3200	11/6/12	9/4/17	Complete Genome	State University of Campinas	SAMN02603885	GCA_000310065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/065/GCA_000310065.1_ASM31006v1	23083487	ATCC 4875
Acidovorax avenae subsp. avenae ATCC 19860	643561	PRJNA37867	37867	Proteobacteria	Betaproteobacteria	5.48217	68.8	chromosome:NC_015138.1/CP002521.1	-	1	4800	4687	2/14/11	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00006197	GCA_000176855.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/855/GCA_000176855.2_ASM17685v2	-	ATCC 19860
Rhodococcus hoagii 103S	685727	PRJEA41335	41335	Terrabacteria group	Actinobacteria	5.04317	68.8	chromosome:NC_014659.1/FN563149.1	-	1	4649	4540	11/9/10	5/19/17	Complete Genome	IREC (International Rhodococcus equi Genome Consortium)	SAMEA2272695	GCA_000196695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/695/GCA_000196695.1_ASM19669v1	20941392	103S
Methylibium petroleiphilum PM1	420662	PRJNA10789	10789	Proteobacteria	Betaproteobacteria	4.64364	68.7869	chromosome:NC_008825.1/CP000555.1; plasmid RPME01:NC_008826.1/CP000556.1	-	2	4580	4452	1/29/07	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02598264	GCA_000015725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/725/GCA_000015725.1_ASM1572v1	17158667	PM1
Burkholderia glumae PG1	595500	PRJNA33837	33837	Proteobacteria	Betaproteobacteria	7.89654	68.7782	chromosome 1:NZ_CP002580.1/CP002580.1; chromosome 2:NZ_CP002581.1/CP002581.1	-	2	6718	6402	2/10/15	4/3/17	Complete Genome	University of Goettingen	SAMN03081274	GCA_000835205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/835/205/GCA_000835205.1_ASM83520v1	26476653	PG1
Rhodobacter sphaeroides	1063	PRJNA316780	316780	Proteobacteria	Alphaproteobacteria	4.64905	68.77	chromosome 1:NZ_CP015210.1/CP015210.1; chromosome 2:NZ_CP015211.1/CP015211.1; plasmid a:NZ_CP015212.1/CP015212.1; plasmid b:NZ_CP015213.1/CP015213.1; plasmid c:NZ_CP015214.1/CP015214.1; plasmid d:NZ_CP015215.1/CP015215.1; plasmid e:NZ_CP015216.1/CP015216.1	-	7	4561	4360	7/15/16	4/5/17	Complete Genome	Chonbuk National University	SAMN04590023	GCA_001685625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/625/GCA_001685625.1_ASM168562v1	-	MBTLJ-13
Chelatococcus sp. CO-6	1702325	PRJNA292999	292999	Proteobacteria	Alphaproteobacteria	5.24373	68.7486	chromosome:NZ_CP012398.1/CP012398.1; plasmid pCO-6:NZ_CP012399.1/CP012399.1	-	2	4920	4786	8/20/15	4/11/17	Complete Genome	Harbin Institute of Technology	SAMN03995875	GCA_001271345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/345/GCA_001271345.1_ASM127134v1	-	CO-6
Rhodobacter sphaeroides	1063	PRJNA293258	293258	Proteobacteria	Alphaproteobacteria	4.66657	68.7375	chromosome 1:NZ_CP012960.1/CP012960.1; chromosome 2:NZ_CP012961.1/CP012961.1; plasmid unnamed_1:NZ_CP012962.1/CP012962.1; plasmid unnamed_2:NZ_CP012963.1/CP012963.1; plasmid unnamed_3:NZ_CP012964.1/CP012964.1; plasmid unnamed_4:NZ_CP012965.1/CP012965.1	-	8	4580	4374	2/16/16	4/5/17	Complete Genome	Chonbuk National University	SAMN04032843	GCA_001576595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/595/GCA_001576595.1_ASM157659v1	-	MBTLJ-8
Paracoccus contaminans	1945662	PRJNA369557	369557	Proteobacteria	Alphaproteobacteria	3.03349	68.7279	chromosome:NZ_CP020612.1/CP020612.1; plasmid unnamed:NZ_CP020613.1/CP020613.1	-	2	2895	2748	4/24/17	4/26/17	Complete Genome	Robert Koch Institute	SAMN06289119	GCA_002105555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/555/GCA_002105555.1_ASM210555v1	-	RKI 16-01929T=LMG 29738T=CCM 8701T=CIP 111112T
Acidipropionibacterium acidipropionici	1748	PRJNA322112	322112	Terrabacteria group	Actinobacteria	3.63189	68.7	chromosome:NZ_CP015970.1/CP015970.1	-	1	3347	3164	10/27/16	4/13/17	Complete Genome	Australian Institute for Bioengineering and Nanotechnology	SAMN05017605	GCA_001855335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/335/GCA_001855335.1_ASM185533v1	27676587	F3E8
Microterricola viridarii	412690	PRJNA309503	309503	Terrabacteria group	Actinobacteria	3.68973	68.7	chromosome:NZ_CP014145.1/CP014145.1	-	1	3387	3206	1/29/16	4/11/17	Complete Genome	CSIR-Institute of Himalayan Bioresource Technology	SAMN04435260	GCA_001542775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/775/GCA_001542775.1_ASM154277v1	-	ERGS5:02
Chondromyces crocatus	52	PRJNA283496	283496	Proteobacteria	delta/epsilon subdivisions	11.3881	68.7	chromosome:NZ_CP012159.1/CP012159.1	-	1	8398	8083	7/30/15	4/11/17	Complete Genome	Helmholtz Centre for Infection Research	SAMN03651481	GCA_001189295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/295/GCA_001189295.1_ASM118929v1	-	Cm c5
Amycolatopsis lurida NRRL 2430	1460371	PRJNA237591	237591	Terrabacteria group	Actinobacteria	8.98766	68.7	chromosome:CP007219.1	-	1	8294	8121	2/10/15	3/13/15	Complete Genome	The university of Cambridge	SAMN02630747	GCA_000749465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/465/GCA_000749465.2_ASM74946v2	-	NRRL 2430
Cyanobium gracile PCC 6307	292564	PRJNA158695	158695	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.34236	68.7	chromosome:NC_019675.1/CP003495.1	-	1	3338	3191	12/4/12	4/17/17	Complete Genome	JGI	SAMN02261330	GCA_000316515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/515/GCA_000316515.1_ASM31651v1	-	PCC 6307
Symbiobacterium thermophilum IAM 14863	292459	PRJNA12994	12994	Terrabacteria group	Firmicutes	3.56614	68.7	chromosome:NC_006177.1/AP006840.1	-	1	3337	3175	9/2/04	4/17/17	Complete Genome	"Kitasato Institute for Life Sciences, Japan"	SAMD00061067	GCA_000009905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/905/GCA_000009905.1_ASM990v1	15383646	IAM14863
Acidipropionibacterium acidipropionici	1748	PRJNA310791	310791	Terrabacteria group	Actinobacteria	3.70719	68.6994	chromosome:NZ_CP014352.1/CP014352.1; plasmid unnamed:NZ_CP014353.1/CP014353.1	-	2	3408	3243	3/30/16	4/12/17	Complete Genome	Australian Institute for Bioengineering and Nanotechnology	SAMN04455717	GCA_001602115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/115/GCA_001602115.1_ASM160211v1	-	ATCC 55737
Thermus thermophilus SG0.5JP17-16	762633	PRJNA51619	51619	Terrabacteria group	Deinococcus-Thermus	2.30323	68.6134	chromosome:NC_017272.1/CP002777.1; plasmid pTHTHE1601:NC_017273.1/CP002778.1	-	2	2491	2325	5/25/11	4/7/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713632	GCA_000214845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/845/GCA_000214845.1_ASM21484v1	-	SG0.5JP17-16
Mycobacterium vaccae 95051	1354275	PRJNA210723	210723	Terrabacteria group	Actinobacteria	6.23575	68.6	chromosome:NZ_CP011491.1/CP011491.1	-	1	5884	5732	6/3/16	4/12/17	Complete Genome	"Institute of Pathogen Biology, CAMS&PUMC"	SAMN03702434	GCA_001655245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/245/GCA_001655245.1_ASM165524v1	-	95051
Cyanobium sp. NIES-981	1851505	PRJEB14035	321594	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.02155	68.6	chromosome I:NZ_LT578417.1/LT578417.1	-	1	3013	2840	6/2/16	5/31/17	Complete Genome	National Institute for Environmental Studies	SAMEA4005231	GCA_900088535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/535/GCA_900088535.1_ASM90008853v1	-	NIES-981
Corynebacterium humireducens NBRC 106098 = DSM 45392	1223515	PRJNA172965	172965	Terrabacteria group	Actinobacteria	2.68131	68.6	chromosome:NZ_CP005286.1/CP005286.1	-	1	2595	2477	1/16/15	4/10/17	Complete Genome	"CeBiTec, Bielefeld University"	SAMN03283197	GCA_000819445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/445/GCA_000819445.1_ASM81944v1	-	DSM 45392
Halorubrum trapanicum	29284	PRJDB4921	326752	Euryarchaeota	Halobacteria	3.0802	68.5999	chromosome:AP017569.1; plasmid pCBA1232-01:AP017570.1; plasmid pCBA1232-02:AP017571.1	-	3	-	-	7/1/16	7/1/16	Complete Genome	Korea Basic Science Institute	SAMD00053811	GCA_002355655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/655/GCA_002355655.1_ASM235565v1	-	CBA1232
Thermus oshimai JL-2	751945	PRJNA63181	63181	Terrabacteria group	Deinococcus-Thermus	2.40133	68.5952	chromosome:NC_019386.1/CP003249.1; plasmid pTHEOS01:NC_019387.1/CP003250.1; plasmid pTHEOS02:NC_019388.1/CP003251.1	-	3	2560	2454	11/5/12	4/8/17	Complete Genome	JGI	SAMN02261408	GCA_000309885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/885/GCA_000309885.1_ASM30988v1	23405355	JL-2
Burkholderia plantarii	41899	PRJNA237833	237833	Proteobacteria	Betaproteobacteria	8.08105	68.5777	chromosome 1:NZ_CP007212.1/CP007212.1; chromosome 2:NZ_CP007213.1/CP007213.1; plasmid bpln_1p:NZ_CP007214.1/CP007214.1	-	3	6879	6575	10/23/15	4/11/17	Complete Genome	Seoul National University	SAMN04210536	GCA_001411805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/805/GCA_001411805.1_ASM141180v1	25943361	ATCC 43733
Thermus sp. CCB_US3_UF1	1111069	PRJNA76491	76491	Terrabacteria group	Deinococcus-Thermus	2.26349	68.5739	chromosome:NC_017278.1/CP003126.1; plasmid pTCCB09:NC_016634.1/CP003127.1	-	2	2314	2220	12/2/11	4/7/17	Complete Genome	Centre for Chemical Biology (CCB@USM)	SAMN02603100	GCA_000236585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/585/GCA_000236585.1_ASM23658v1	-	CCB_US3_UF1
Cupriavidus sp. USMAHM13	1389192	PRJNA348156	348156	Proteobacteria	Betaproteobacteria	7.82082	68.5561	chromosome 1:NZ_CP017751.1/CP017751.1; chromosome 2:NZ_CP017752.1/CP017752.1; plasmid unnamed1:NZ_CP017753.1/CP017753.1	-	3	6932	6671	10/26/16	4/13/17	Complete Genome	Universiti Sains Malaysia	SAMN05904706	GCA_001854285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/285/GCA_001854285.1_ASM185428v1	-	USMAHM13
Azospirillum brasilense	192	PRJNA238398	238398	Proteobacteria	Alphaproteobacteria	7.39128	68.5351	chromosome:NZ_CP007793.1/CP007793.1; plasmid AbAZ39_p1:NZ_CP007794.1/CP007794.1; plasmid AbAZ39_p2:NZ_CP007795.1/CP007795.1; plasmid AbAZ39_p3:NZ_CP007796.1/CP007796.1; plasmid AbAZ39_p4:NZ_CP007797.1/CP007797.1; plasmid AbAZ39_p5:NZ_CP007798.1/CP007798.1	-	6	6713	6408	6/5/14	4/9/17	Complete Genome	INDEAR	SAMN02644441	GCA_000632475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/475/GCA_000632475.2_ASM63247v2	25059863	Az39
Burkholderia mallei NCTC 10247	320389	PRJNA238810	238810	Proteobacteria	Betaproteobacteria	5.82766	68.5228	chromosome 1:NZ_CP007802.1/CP007802.1; chromosome 2:NZ_CP007801.1/CP007801.1	-	2	6174	5699	10/2/14	4/2/17	Complete Genome	Los Alamos National Laboratory	SAMN02798191	GCA_000762285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/285/GCA_000762285.1_ASM76228v1	25414490	NCTC 10247
Burkholderia mallei NCTC 10247	320389	PRJNA13946	13946	Proteobacteria	Betaproteobacteria	5.84838	68.5218	chromosome I:NC_009080.1/CP000548.1; chromosome II:NC_009079.1/CP000547.1	-	2	6136	5718	2/27/07	5/18/17	Complete Genome	TIGR	SAMN02604033	GCA_000015625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/625/GCA_000015625.1_ASM1562v1	-	NCTC 10247
Burkholderia mallei	13373	PRJNA244037	244037	Proteobacteria	Betaproteobacteria	5.83554	68.5188	chromosome 1:NZ_CP009148.1/CP009148.1; chromosome 2:NZ_CP009147.1/CP009147.1	-	2	6200	5760	9/18/14	4/2/17	Complete Genome	Los Alamos National Laboratory	SAMN02945023	GCA_000755785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/785/GCA_000755785.1_ASM75578v1	25414490	FMH 23344
Burkholderia mallei ATCC 23344	243160	PRJNA171	171	Proteobacteria	Betaproteobacteria	5.83553	68.5188	chromosome 1:NC_006348.1/CP000010.1; chromosome 2:NC_006349.2/CP000011.2	-	2	5506	5022	9/22/04	8/3/16	Complete Genome	TIGR	SAMN02603987	GCA_000011705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/705/GCA_000011705.1_ASM1170v1	"1,137,312,015,377,790"	ATCC 23344
Burkholderia mallei	13373	PRJNA238562	238562	Proteobacteria	Betaproteobacteria	5.91313	68.5184	chromosome I:NZ_CP009587.1/CP009587.1; chromosome II:NZ_CP009588.1/CP009588.1	-	2	6265	5790	3/20/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03079578	GCA_000959405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/405/GCA_000959405.1_ASM95940v1	25931592	11
Burkholderia mallei	13373	PRJNA244043	244043	Proteobacteria	Betaproteobacteria	5.87493	68.5161	chromosome 1:NZ_CP008732.1/CP008732.2; chromosome 2:NZ_CP008731.1/CP008731.2	-	2	6248	5782	9/18/14	4/2/17	Complete Genome	Los Alamos National Laboratory	SAMN02849482	GCA_000756025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/025/GCA_000756025.2_ASM75602v2	25414490	2000031063
Rhodobacter sp. CZR27	2033869	PRJNA401084	401084	Proteobacteria	Alphaproteobacteria	4.43711	68.5146	chromosome:CP023548.1; plasmid unnamed1:CP023549.1; plasmid unnamed2:CP023550.1; plasmid unnamed3:CP023551.1	-	4	-	-	10/2/17	10/2/17	Complete Genome	Nanjing Agricultrure University	SAMN07594235	GCA_002407205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/407/205/GCA_002407205.1_ASM240720v1	-	CZR27
Burkholderia mallei	13373	PRJNA238935	238935	Proteobacteria	Betaproteobacteria	5.78044	68.5097	chromosome 1:NZ_CP010065.1/CP010065.1; chromosome 2:NZ_CP010066.1/CP010066.1	-	2	6157	5753	3/20/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03222861	GCA_000959625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/625/GCA_000959625.1_ASM95962v1	25931592	2002721276
Burkholderia mallei	13373	PRJNA342247	342247	Proteobacteria	Betaproteobacteria	5.78017	68.5081	chromosome 1:NZ_CP017175.1/CP017175.1; chromosome 2:NZ_CP017176.1/CP017176.1	-	2	6140	5713	9/16/16	4/5/17	Complete Genome	"Friedrich Loeffler Institut, Federal Research Institute for Animal Health"	SAMN05607081	GCA_001729545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/545/GCA_001729545.1_ASM172954v1	-	Bahrain1
Cystobacter fuscus	43	PRJNA358170	358170	Proteobacteria	delta/epsilon subdivisions	12.3497	68.5	chromosome:NZ_CP022098.1/CP022098.1	-	1	10042	9609	9/15/17	9/18/17	Complete Genome	Max-Planck Institute for terrestrial Microbiology	SAMN06167122	GCA_002305875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/875/GCA_002305875.1_ASM230587v1	-	DSM 52655
Bordetella genomosp. 6	463024	PRJNA385118	385118	Proteobacteria	Betaproteobacteria	5.16329	68.5	chromosome:NZ_CP021107.1/CP021107.1	-	1	4863	4751	5/9/17	5/22/17	Complete Genome	University of Michigan	SAMN06767144	GCA_002119705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/705/GCA_002119705.1_ASM211970v1	-	AU22978
Mycobacterium aurum	1791	PRJEB13254	324052	Terrabacteria group	Actinobacteria	6.03873	68.5	chromosome I:NZ_LT549889.1/LT549889.1	-	1	5772	5512	5/31/16	5/31/17	Complete Genome	PASTEUR	SAMEA3914648	GCA_900078775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/775/GCA_900078775.1_ASM90007877v1	-	-
Actinomyces oris	544580	PRJNA282954	282954	Terrabacteria group	Actinobacteria	3.04292	68.5	chromosome:NZ_CP014232.1/CP014232.1	-	1	2516	2393	2/9/16	4/4/17	Complete Genome	The Forsyth Institute	SAMN04435864	GCA_001553935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/935/GCA_001553935.1_ASM155393v1	-	T14V
Stenotrophomonas acidaminiphila	128780	PRJNA296415	296415	Proteobacteria	Gammaproteobacteria	4.1383	68.5	chromosome:NZ_CP012900.1/CP012900.1	-	1	3709	3570	10/14/15	4/11/17	Complete Genome	Centro de Ciencias Genomicas - UNAM	SAMN04099006	GCA_001314305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/305/GCA_001314305.1_ASM131430v1	26659678	ZAC14D2_NAIMI4_2
Rickettsia sibirica 246	272951	PRJNA1414	1414	Proteobacteria	Alphaproteobacteria	1.25002	32.5	chromosome:NZ_AABW01000001.1/AABW01000001.1	AABW01	1	1513	1273	2/6/03	4/7/17	Chromosome	Univ. of Maryland	SAMN02393728	GCA_000166935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/935/GCA_000166935.1_ASM16693v1	-	246
Acidovorax citrulli AAC00-1	397945	PRJNA15708	15708	Proteobacteria	Betaproteobacteria	5.35277	68.5	chromosome:NC_008752.1/CP000512.1	-	1	4890	4674	1/4/07	5/18/17	Complete Genome	DOE Joint Genome Institute	SAMN02598334	GCA_000015325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/325/GCA_000015325.1_ASM1532v1	-	AAC00-1
Crocosphaera watsonii WH 8501	165597	PRJNA10651	10651	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.23816	37.1	-	AADV02	323	6516	5079	3/10/04	5/18/17	Scaffold	DOE Joint Genome Institute	SAMN02441415	GCA_000167195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/195/GCA_000167195.1_ASM16719v1	-	WH 8501
Burkholderia mallei	13373	PRJNA244052	244052	Proteobacteria	Betaproteobacteria	5.63023	68.4979	chromosome 1:NZ_CP008723.1/CP008723.1; chromosome 2:NZ_CP008722.1/CP008722.1	-	2	6017	5539	9/18/14	4/2/17	Complete Genome	Los Alamos National Laboratory	SAMN02839409	GCA_000755885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/885/GCA_000755885.1_ASM75588v1	25414490	BMQ
Burkholderia mallei	13373	PRJNA244041	244041	Proteobacteria	Betaproteobacteria	5.62529	68.4977	chromosome 1:NZ_CP008704.1/CP008704.1; chromosome 2:NZ_CP008705.1/CP008705.1	-	2	6018	5530	9/18/14	4/2/17	Complete Genome	Los Alamos National Laboratory	SAMN02821273	GCA_000755865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/865/GCA_000755865.1_ASM75586v1	25414490	23344
Thermus parvatiensis	456163	PRJNA308159	308159	Terrabacteria group	Deinococcus-Thermus	2.0161	68.4929	chromosome:NZ_CP014141.1/CP014141.1; plasmid pTP143:NZ_CP014142.1/CP014142.1	-	2	2222	1566	1/25/16	4/11/17	Complete Genome	University of Delhi	SAMN04387723	GCA_001535545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/545/GCA_001535545.1_ASM153554v1	-	RL
Cupriavidus sp. USMAA1020	367825	PRJNA348156	348156	Proteobacteria	Betaproteobacteria	7.94945	68.4881	chromosome 1:NZ_CP017754.1/CP017754.1; chromosome 2:NZ_CP017755.1/CP017755.1; plasmid unnamed1:NZ_CP017756.1/CP017756.1	-	3	7152	6924	10/26/16	4/17/17	Complete Genome	Universiti Sains Malaysia	SAMN05904704	GCA_001854325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/325/GCA_001854325.1_ASM185432v1	-	USMAA1020
Methylobacterium nodulans ORS 2060	460265	PRJNA20477	20477	Proteobacteria	Alphaproteobacteria	8.83902	68.485	chromosome:NC_011894.1/CP001349.1; plasmid pMNOD01:NC_011892.1/CP001350.1; plasmid pMNOD02:NC_011887.1/CP001351.1; plasmid pMNOD03:NC_011893.1/CP001352.1; plasmid pMNOD04:NC_011895.1/CP001353.1; plasmid pMNOD05:NC_011888.1/CP001354.1; plasmid pMNOD06:NC_011889.1/CP001355.1; plasmid pMNOD07:NC_011890.1/CP001356.1	-	8	8557	7961	1/12/09	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000043	GCA_000022085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/085/GCA_000022085.1_ASM2208v1	-	ORS 2060
Burkholderia mallei	13373	PRJNA238811	238811	Proteobacteria	Betaproteobacteria	5.74234	68.4784	chromosome 1:NZ_CP009337.1/CP009337.1; chromosome 2:NZ_CP009338.1/CP009338.1	-	2	6070	5610	3/20/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03010440	GCA_000959165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/165/GCA_000959165.1_ASM95916v1	25931592	2002734299
Burkholderia mallei NCTC 10229	412022	PRJNA13943	13943	Proteobacteria	Betaproteobacteria	5.7423	68.4784	chromosome I:NC_008836.1/CP000546.1; chromosome II:NC_008835.1/CP000545.1	-	2	6004	5602	1/30/07	5/18/17	Complete Genome	TIGR	SAMN02604032	GCA_000015605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/605/GCA_000015605.1_ASM1560v1	-	NCTC 10229
Methylobacterium extorquens AM1	272630	PRJNA20	20	Proteobacteria	Alphaproteobacteria	6.87978	68.4674	chromosome:NC_012808.1/CP001510.1; plasmid megaplasmid:NC_012811.1/CP001511.1; plasmid p1META1:NC_012807.1/CP001512.1; plasmid p2META1:NC_012809.1/CP001513.1; plasmid p3META1:NC_012810.1/CP001514.1	-	5	6528	6256	6/17/09	5/19/17	Complete Genome	University of Washington Genome Center	SAMN02604258	GCA_000022685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/685/GCA_000022685.1_ASM2268v1	19440302	AM1
Burkholderia mallei	13373	PRJNA244055	244055	Proteobacteria	Betaproteobacteria	5.64777	68.4661	chromosome 1:NZ_CP008711.1/CP008711.1; chromosome 2:NZ_CP008710.1/CP008710.1	-	2	6001	5525	9/18/14	4/2/17	Complete Genome	Los Alamos National Laboratory	SAMN02837932	GCA_000755845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/845/GCA_000755845.1_ASM75584v1	25414490	6
Candidatus Protochlamydia amoebophila UWE25	264201	PRJNA10700	10700	PVC group	Chlamydiae	2.41446	34.7	chromosome:NC_005861.1/BX908798.1	-	1	1978	1841	4/8/04	3/22/17	Chromosome	"University of Vienna, Austria"	SAMEA3138214	GCA_000011565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/565/GCA_000011565.1_ASM1156v1	15073324	UWE25
Mycobacterium sp. MCS	164756	PRJNA15762	15762	Terrabacteria group	Actinobacteria	5.92052	68.431	chromosome:NC_008146.1/CP000384.1; plasmid Plasmid1:NC_008147.1/CP000385.1	-	2	5761	5642	6/9/06	5/18/17	Complete Genome	DOE Joint Genome Institute	SAMN02598348	GCA_000014165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/165/GCA_000014165.1_ASM1416v1	-	MCS
Campylobacter upsaliensis DSM 5365	1121269	PRJNA220998	220998	Proteobacteria	delta/epsilon subdivisions	1.61905	35	-	JHZN01	43	1669	1547	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743969	GCA_000620965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/965/GCA_000620965.1_ASM62096v1	-	DSM 5365
Burkholderia mallei	13373	PRJNA238813	238813	Proteobacteria	Betaproteobacteria	5.68645	68.4243	chromosome I:NZ_CP009642.1/CP009642.1; chromosome II:NZ_CP009643.1/CP009643.1	-	2	6087	5659	3/20/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03107083	GCA_000959465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/465/GCA_000959465.1_ASM95946v1	25931592	India86-567-2
Methylobacterium sp. AMS5	925818	PRJNA231761	231761	Proteobacteria	Alphaproteobacteria	5.59921	68.4101	chromosome:NZ_CP006992.1/CP006992.1; plasmid pAMS5a:NZ_CP006993.1/CP006993.1; plasmid pAMS5b:NZ_CP006994.1/CP006994.1; plasmid pAMS5c:NZ_CP006995.1/CP006995.1	-	4	5127	4872	1/29/16	4/16/17	Complete Genome	"Graduate school of life sciences, Tohoku University"	SAMN04446536	GCA_001542815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/815/GCA_001542815.1_ASM154281v1	26988053	AMS5
Melittangium boletus DSM 14713	1294270	PRJNA189498	189498	Proteobacteria	delta/epsilon subdivisions	9.91044	68.4	chromosome:NZ_CP022163.1/CP022163.1	-	1	8173	7891	9/15/17	9/18/17	Complete Genome	Max Planck Institute for Terrestrial Microbiology	SAMN06850203	GCA_002305855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/855/GCA_002305855.1_ASM230585v1	-	DSM 14713
Desulfuromonas acetoxidans DSM 684	281689	PRJNA12551	12551	Proteobacteria	delta/epsilon subdivisions	3.82833	51.8	-	AAEW02	51	3366	3241	6/20/05	4/7/17	Scaffold	DOE Joint Genome Institute	SAMN02441806	GCA_000167355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/355/GCA_000167355.1_ASM16735v1	-	DSM 684
Mycobacterium terrae	1788	PRJEB6403	251923	Terrabacteria group	Actinobacteria	4.53232	68.4	chromosome 1:NZ_LT906469.1/LT906469.1	-	1	4284	4113	8/15/17	8/28/17	Complete Genome	SC	SAMEA4434518	GCA_900187145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/145/GCA_900187145.1_50818_H01	-	NCTC10856
Brevundimonas sp. LM2	1938605	PRJNA368729	368729	Proteobacteria	Alphaproteobacteria	3.56452	68.4	chromosome:NZ_CP019508.1/CP019508.1	-	1	3495	3403	2/17/17	4/17/17	Complete Genome	The University of Chicago	SAMN06256474	GCA_002002865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/865/GCA_002002865.1_ASM200286v1	-	LM2
Actinomyces naeslundii	1655	PRJDB5207	350812	Terrabacteria group	Actinobacteria	3.04045	68.4	chromosome:AP017894.1	-	1	3289	3229	10/26/16	10/26/16	Complete Genome	Osaka Dental University	SAMD00064391	GCA_002355915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/915/GCA_002355915.1_ASM235591v1	-	ATCC 27039
Hydrogenophaga sp. PBC	795665	PRJNA84413	84413	Proteobacteria	Betaproteobacteria	5.23248	68.4	chromosome:NZ_CP017311.1/CP017311.1	-	1	5057	4933	9/28/16	4/17/17	Complete Genome	Universiti Teknologi Malaysia	SAMN02471431	GCA_000263795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/795/GCA_000263795.2_Hint_PBC	22887664	PBC
Bordetella bronchiseptica	518	PRJNA287884	287884	Proteobacteria	Betaproteobacteria	5.07749	68.4	chromosome:NZ_CP016431.1/CP016431.1	-	1	4786	4633	8/12/16	8/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05333722	GCA_001704355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/355/GCA_001704355.1_ASM170435v1	27795250	I328
Microcella alkaliphila	279828	PRJDB4439	308978	Terrabacteria group	Actinobacteria	2.70284	68.4	chromosome:AP017315.1	-	1	2700	2652	1/15/16	1/15/16	Complete Genome	"Graduate School of Agriculture, Kindai University"	SAMD00044342	GCA_002355395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/395/GCA_002355395.1_Microcella_alkaliphila_JAM_AC0309_assembly_01	-	JAM AC0309
Kibdelosporangium phytohabitans	860235	PRJNA289020	289020	Terrabacteria group	Actinobacteria	11.7598	68.4	chromosome:NZ_CP012752.1/CP012752.1	-	1	10729	10234	9/29/15	4/16/17	Complete Genome	Jiangsu Normal University	SAMN03840758	GCA_001302585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/585/GCA_001302585.1_ASM130258v1	-	KLBMP1111
Mycobacterium intracellulare 1956	1299331	PRJNA260706	260706	Terrabacteria group	Actinobacteria	5.18305	68.4	chromosome:NZ_CP009499.1/CP009499.1	-	1	4909	4749	10/20/14	4/2/17	Complete Genome	BEI Resources/American Type	SAMN03067432	GCA_000767485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/485/GCA_000767485.1_ASM76748v1	-	1956
Bordetella bronchiseptica MO149	1208658	PRJEB141	177085	Proteobacteria	Betaproteobacteria	5.09182	68.4	chromosome:NC_018829.1/HE965807.1	-	1	4774	4667	10/8/12	5/18/17	Complete Genome	WTSI	SAMEA2272800	GCA_000317955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/955/GCA_000317955.1_ASM31795v1	23051057	MO149
Nocardia cyriacigeorgica GUH-2	1127134	PRJEA79001	79001	Terrabacteria group	Actinobacteria	6.19465	68.4	chromosome:NC_016887.1/FO082843.1	-	1	5605	5465	2/7/12	5/19/17	Complete Genome	CEA/DSV/IG/Genoscope	SAMEA2272802	GCA_000284035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/035/GCA_000284035.1_ASM28403v1	22461543	GUH-2
Mycobacterium sinense	875328	PRJNA51513	51513	Terrabacteria group	Actinobacteria	4.64367	68.4	chromosome:NC_015576.1/CP002329.1	-	1	4413	4259	5/20/11	5/18/17	Complete Genome	Shanghai Jiao Tong University School of Medicine	SAMN02603865	GCA_000214155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/155/GCA_000214155.1_ASM21415v1	21685274	JDM601
Brevundimonas subvibrioides ATCC 15264	633149	PRJNA36643	36643	Proteobacteria	Alphaproteobacteria	3.44526	68.4	chromosome:NC_014375.1/CP002102.1	-	1	3351	3277	8/5/10	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN00007485	GCA_000144605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/605/GCA_000144605.1_ASM14460v1	-	ATCC 15264
Mycobacterium sp. JLS	164757	PRJNA16079	16079	Terrabacteria group	Actinobacteria	6.04842	68.4	chromosome:NC_009077.1/CP000580.1	-	1	5851	5698	2/27/07	5/18/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598355	GCA_000016005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/005/GCA_000016005.1_ASM1600v1	-	JLS
Tsukamurella paurometabola DSM 20162	521096	PRJNA29399	29399	Terrabacteria group	Actinobacteria	4.47972	68.3866	chromosome:NC_014158.1/CP001966.1; plasmid pTpau01:NC_014159.1/CP001967.1	-	2	4328	4194	5/13/10	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002597	GCA_000092225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/225/GCA_000092225.1_ASM9222v1	21886861	DSM 20162
Frondihabitans sp. PAMC 28766	1795630	PRJNA310978	310978	Terrabacteria group	Actinobacteria	4.76686	68.3825	chromosome:NZ_CP014513.1/CP014513.1; plasmid 1:NZ_CP014514.1/CP014514.1; plasmid 2:NZ_CP014515.1/CP014515.1; plasmid 3:NZ_CP014516.1/CP014516.1	-	4	4540	4180	2/29/16	4/12/17	Complete Genome	Korea Polar Research Institute	SAMN04457486	GCA_001577365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/365/GCA_001577365.1_ASM157736v1	-	PAMC 28766
Cryobacterium arcticum	670052	PRJNA326192	326192	Terrabacteria group	Actinobacteria	4.35123	68.3793	chromosome 1:NZ_CP016282.1/CP016282.1; plasmid pP27867_1:NZ_CP016283.1/CP016283.1; plasmid pP27867_2:NZ_CP016284.1/CP016284.1	-	3	4043	3932	7/5/16	4/17/17	Complete Genome	Korea Polar Research Institute	SAMN05271266	GCA_001679725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/725/GCA_001679725.1_ASM167972v1	-	PAMC 27867
Burkholderia mallei	13373	PRJNA238930	238930	Proteobacteria	Betaproteobacteria	5.40916	68.3718	chromosome I:NZ_CP009707.1/CP009707.1; chromosome II:NZ_CP009708.1/CP009708.1	-	2	5826	5409	3/20/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03120828	GCA_000959485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/485/GCA_000959485.1_ASM95948v1	25931592	2002734306
Burkholderia mallei SAVP1	320388	PRJNA13947	13947	Proteobacteria	Betaproteobacteria	5.2324	68.3653	chromosome I:NC_008785.1/CP000526.1; chromosome II:NC_008784.1/CP000525.1	-	2	5481	5117	1/5/07	5/18/17	Complete Genome	TIGR	SAMN02604034	GCA_000015465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/465/GCA_000015465.1_ASM1546v1	-	SAVP1
Microbacterium sp. TPU 3598	1938334	PRJDB5496	369651	Terrabacteria group	Actinobacteria	3.82298	68.3598	chromosome:AP017975.1; plasmid MST3P:AP017976.1	-	2	-	-	1/28/17	1/28/17	Complete Genome	"Biotechnology Research Center and Department of Biotechnology, Toyama Prefectural University"	SAMD00073751	GCA_002356155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/155/GCA_002356155.1_MST3_assembly01	-	TPU 3598
Azospirillum brasilense	192	PRJNA293508	293508	Proteobacteria	Alphaproteobacteria	6.58753	68.3137	chromosome:NZ_CP012914.1/CP012914.1; plasmid ABSP7_p1:NZ_CP012915.1/CP012915.1; plasmid ABSP7_p2:NZ_CP012916.1/CP012916.1; plasmid ABSP7_p3:NZ_CP012917.1/CP012917.1; plasmid ABSP7_p4:NZ_CP012918.1/CP012918.1; plasmid ABSP7_p5:NZ_CP012919.1/CP012919.1	-	6	5951	5730	10/15/15	4/11/17	Complete Genome	Kyungpook National University	SAMN04005082	GCA_001315015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/015/GCA_001315015.1_ASM131501v1	-	Sp 7
Mycobacterium chubuense NBB4	710421	PRJNA53215	53215	Terrabacteria group	Actinobacteria	6.34262	68.3003	chromosome:NC_018027.1/CP003053.1; plasmid pMYCCH.01:NC_018022.1/CP003054.1; plasmid pMYCCH.02:NC_018023.1/CP003055.1	-	3	6006	5808	6/12/12	5/19/17	Complete Genome	JGI	SAMN02261374	GCA_000266905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/905/GCA_000266905.1_ASM26690v1	-	NBB4
Luteimonas sp. 100111	2006110	PRJNA407011	407011	Proteobacteria	Gammaproteobacteria	3.35178	68.3	chromosome:CP023406.1	-	1	3018	2888	9/21/17	9/21/17	Complete Genome	China disease prevention and control center	SAMN07357069	GCA_002327105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/105/GCA_002327105.1_ASM232710v1	-	100111
Rhodothermaceae bacterium RA	1779382	PRJNA308615	308615	FCB group	Bacteroidetes/Chlorobi group	4.65322	68.3	chromosome:NZ_CP020382.1/CP020382.1	-	1	3711	3506	3/22/17	3/25/17	Complete Genome	Universiti Teknologi Malaysia	SAMN04404272	GCA_001518995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/995/GCA_001518995.2_ASM151899v2	-	RA
Leifsonia xyli subsp. cynodontis DSM 46306	1389489	PRJNA215687	215687	Terrabacteria group	Actinobacteria	2.68642	68.3	chromosome:NC_022438.1/CP006734.1	-	1	2647	2209	9/24/13	4/9/17	Complete Genome	ESALQ-USP	SAMN02603223	GCA_000470775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/775/GCA_000470775.1_ASM47077v1	24201198	DSM 46306
Wolbachia endosymbiont of Culex quinquefasciatus Pel	570417	PRJNA30313	30313	Proteobacteria	Alphaproteobacteria	1.48246	34.2	chromosome:NC_010981.1/AM999887.1	-	1	1402	1257	6/13/08	4/7/17	Chromosome	Wellcome Trust Sanger Institute	SAMEA1705930	GCA_000073005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/073/005/GCA_000073005.1_ASM7300v1	18550617	wPip
Acidimicrobium ferrooxidans DSM 10331	525909	PRJNA29525	29525	Terrabacteria group	Actinobacteria	2.15816	68.3	chromosome:NC_013124.1/CP001631.1	-	1	2122	2034	8/18/09	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598466	GCA_000023265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/265/GCA_000023265.1_ASM2326v1	21304635	DSM 10331
Thauera sp. MZ1T	85643	PRJNA20091	20091	Proteobacteria	Betaproteobacteria	4.57459	68.2955	chromosome:NC_011662.2/CP001281.2; plasmid pTha01:NC_011667.1/CP001282.1	-	2	4105	3940	12/15/08	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000048	GCA_000021765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/765/GCA_000021765.1_ASM2176v1	23407619	MZ1T
Methylobacterium zatmanii	29429	PRJNA376590	376590	Proteobacteria	Alphaproteobacteria	5.61222	68.2932	chromosome:NZ_CP021054.1/CP021054.1; plasmid unnamed:NZ_CP021055.1/CP021055.1	-	2	5188	4891	5/4/17	5/6/17	Complete Genome	University of Minnesota	SAMN06436009	GCA_002117815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/815/GCA_002117815.1_ASM211781v1	-	PSBB041
Achromobacter xylosoxidans	85698	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	6.8864	68.2898	chromosome:NZ_CP014060.1/CP014060.1; plasmid unnamed:NZ_CP014059.1/CP014059.1	-	2	6313	5913	2/11/16	4/5/17	Complete Genome	US Food and Drug Administration 	SAMN03996290	GCA_001558755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/755/GCA_001558755.1_ASM155875v1	-	FDAARGOS_147
Mitsuaria sp. 7	1658665	PRJNA284647	284647	Proteobacteria	Betaproteobacteria	6.08509	68.2827	chromosome:NZ_CP011514.1/CP011514.1; plasmid unnamed:NZ_CP011515.1/CP011515.1	-	2	5351	5232	6/1/16	4/12/17	Complete Genome	Nanjing Agricultural University	SAMN03704891	GCA_001653795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/795/GCA_001653795.1_ASM165379v1	-	7
Burkholderia pseudomallei MSHR5858	1306417	PRJNA244526	244526	Proteobacteria	Betaproteobacteria	7.07213	68.278	chromosome 1:NZ_CP008891.1/CP008891.1; chromosome 2:NZ_CP008892.1/CP008892.1	-	2	7290	6795	9/18/14	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN02902606	GCA_000755945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/945/GCA_000755945.1_ASM75594v1	25414490	MSHR5858
Burkholderia pseudomallei 668	320373	PRJNA13953	13953	Proteobacteria	Betaproteobacteria	7.0404	68.2665	chromosome I:NC_009074.1/CP000570.1; chromosome II:NC_009075.1/CP000571.1	-	2	7277	6724	2/27/07	5/18/17	Complete Genome	TIGR	SAMN02604035	GCA_000015905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/905/GCA_000015905.1_ASM1590v1	-	668
Burkholderia pseudomallei	28450	PRJNA238566	238566	Proteobacteria	Betaproteobacteria	7.04271	68.2664	chromosome I:NZ_CP009545.1/CP009545.1; chromosome II:NZ_CP009546.1/CP009546.1	-	2	7289	6729	3/20/15	3/26/17	Complete Genome	Los Alamos National Laboratory	SAMN03075633	GCA_000959305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/305/GCA_000959305.1_ASM95930v1	25931592	MSHR668
marine actinobacterium PHSC20C1	312284	PRJNA13373	13373	Terrabacteria group	Actinobacteria	2.77219	59.1	-	AAOB01	1	2687	2619	2/24/06	4/17/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436159	GCA_000153145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/145/GCA_000153145.1_ASM15314v1	-	PHSC20C1
Tessaracoccus flavescens	399497	PRJNA362685	362685	Terrabacteria group	Actinobacteria	3.65077	68.264	chromosome:NZ_CP019607.1/CP019607.1; plasmid unnamed:NZ_CP019608.1/CP019608.1	-	2	3525	3278	2/14/17	4/17/17	Complete Genome	Kyung Hee University	SAMN06245885	GCA_001998865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/865/GCA_001998865.1_ASM199886v1	18398170	SST-39T
Burkholderia pseudomallei	28450	PRJNA244406	244406	Proteobacteria	Betaproteobacteria	7.08643	68.2627	chromosome 1:NZ_CP008758.1/CP008758.1; chromosome 2:NZ_CP008759.1/CP008759.1	-	2	7269	6809	9/18/14	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN02864954	GCA_000756145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/145/GCA_000756145.1_ASM75614v1	25414490	1106a
Wolbachia endosymbiont of Drosophila ananassae	307502	PRJNA13365	13365	Proteobacteria	Alphaproteobacteria	1.44075	35.7	-	AAGB01	464	1421	965	2/3/05	8/8/17	Contig	TIGR	SAMN02435862	GCA_000167475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/475/GCA_000167475.1_ASM16747v1	15774024	-
Burkholderia pseudomallei	28450	PRJNA244417	244417	Proteobacteria	Betaproteobacteria	7.0854	68.2625	chromosome 1:NZ_CP008781.1/CP008781.1; chromosome 2:NZ_CP008782.1/CP008782.1	-	2	7280	6830	9/18/14	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN02866341	GCA_000756125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/125/GCA_000756125.1_ASM75612v1	25414490	Mahidol-1106a
Burkholderia pseudomallei 1106a	357348	PRJNA16182	16182	Proteobacteria	Betaproteobacteria	7.08925	68.2624	chromosome I:NC_009076.1/CP000572.1; chromosome II:NC_009078.1/CP000573.1	-	2	7272	6830	2/27/07	5/18/17	Complete Genome	TIGR	SAMN02604046	GCA_000015925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/925/GCA_000015925.1_ASM1592v1	-	1106a
Corynebacterium halotolerans YIM 70093 = DSM 44683	1121362	PRJNA168616	168616	Terrabacteria group	Actinobacteria	3.22201	68.2608	chromosome:NC_020302.1/CP003697.1; plasmid pCha1:NC_020303.1/CP003698.1	-	2	2937	2827	2/20/13	4/8/17	Complete Genome	Bielefeld University	SAMN02603027	GCA_000341345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/345/GCA_000341345.1_ASM34134v1	23408721	YIM 70093 = DSM 44683
Microscilla marina ATCC 23134	313606	PRJNA13411	13411	FCB group	Bacteroidetes/Chlorobi group	9.77123	40.6	-	AAWS01	135	7487	7211	1/22/07	5/19/17	Contig	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436130	GCA_000169175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/175/GCA_000169175.1_ASM16917v1	-	ATCC 23134
Rhodobacter sphaeroides ATCC 17025	349102	PRJNA15755	15755	Proteobacteria	Alphaproteobacteria	4.55713	68.2478	chromosome:NC_009428.1/CP000661.1; plasmid pRSPA01:NC_009429.1/CP000662.1; plasmid pRSPA02:NC_009430.1/CP000663.1; plasmid pRSPA03:NC_009431.1/CP000664.1; plasmid pRSPA04:NC_009432.1/CP000665.1; plasmid pRSPA05:NC_009433.1/CP000666.1	-	6	4547	4280	4/20/07	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598341	GCA_000016405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/405/GCA_000016405.1_ASM1640v1	-	ATCC 17025
Burkholderia pseudomallei BPC006	1229785	PRJNA172945	172945	Proteobacteria	Betaproteobacteria	7.15506	68.2204	chromosome I:NC_018527.1/CP003781.1; chromosome II:NC_018529.1/CP003782.1	-	2	7373	6885	9/5/12	5/18/17	Complete Genome	"Department of Clinical Microbiology and Immunology, College of Medical Laboratory, National Engineer Research Center for Immunization Products, Third Military Medical University, Chongqing, China."	SAMN02603176	GCA_000294635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/635/GCA_000294635.1_ASM29463v1	23144371	BPC006
Burkholderia pseudomallei	28450	PRJNA293915	293915	Proteobacteria	Betaproteobacteria	7.18468	68.2076	chromosome 1:NZ_CP012576.1/CP012576.1; chromosome 2:NZ_CP012577.1/CP012577.1	-	2	7419	6935	9/2/15	3/26/17	Complete Genome	University of Malaya	SAMN04011951	GCA_001277975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/975/GCA_001277975.1_ASM127797v1	-	982
Burkholderia pseudomallei	28450	PRJNA276393	276393	Proteobacteria	Betaproteobacteria	7.04578	68.202	chromosome 1:NZ_CP010973.1/CP010973.1; chromosome 2:NZ_CP010974.1/CP010974.1	-	2	7263	6777	3/17/15	3/25/17	Complete Genome	National Kaohsiung Normal University	SAMN03372474	GCA_000954175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/954/175/GCA_000954175.1_ASM95417v1	25931599	vgh07
Rhodococcus rhodochrous	1829	PRJEB6403	251923	Terrabacteria group	Actinobacteria	5.27476	68.2	chromosome 1:NZ_LT906450.1/LT906450.1	-	1	4841	4668	8/15/17	8/28/17	Complete Genome	SC	SAMEA4535765	GCA_900187265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/265/GCA_900187265.1_52295_G01	-	NCTC10210
Nocardia brasiliensis	37326	PRJNA231221	231221	Terrabacteria group	Actinobacteria	8.93465	68.2	chromosome:NZ_CP022088.1/CP022088.1	-	1	8115	7572	6/27/17	6/29/17	Complete Genome	US Food and Drug Administration 	SAMN06173365	GCA_002209125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/125/GCA_002209125.1_ASM220912v1	-	FDAARGOS_352
Methylobacterium extorquens	408	PRJNA360464	360464	Proteobacteria	Alphaproteobacteria	5.65431	68.2	chromosome:NZ_CP019322.1/CP019322.1	-	1	5233	4942	1/26/17	4/6/17	Complete Genome	University of Minnesota	SAMN06210717	GCA_001971665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/665/GCA_001971665.1_ASM197166v1	-	PSBB040
Luteipulveratus mongoliensis	571913	PRJNA278633	278633	Terrabacteria group	Actinobacteria	5.42091	68.2	chromosome:NZ_CP011112.1/CP011112.1	-	1	5182	5078	8/3/15	4/16/17	Complete Genome	Novartis	SAMN03421079	GCA_001190945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/190/945/GCA_001190945.1_ASM119094v1	-	MN07-A0370
Idiomarina baltica OS145	314276	PRJNA13408	13408	Proteobacteria	Gammaproteobacteria	2.77027	47.3	-	AAMX01	15	2599	2492	1/24/06	4/17/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436083	GCA_000152885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/885/GCA_000152885.1_ASM15288v1	-	OS145
Mycoplasma alligatoris A21JP2	747682	PRJNA46701	46701	Terrabacteria group	Tenericutes	0.97303	26.7	-	ADNC01	33	842	763	3/30/10	4/17/17	Contig	J. Craig Venter Institute	SAMN02436327	GCA_000178375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/375/GCA_000178375.1_ASM17837v1	-	A21JP2
Bordetella bronchiseptica	518	PRJDB1669	245082	Proteobacteria	Betaproteobacteria	5.19171	68.2	chromosome:NZ_AP014582.1/AP014582.1	-	1	4891	4796	4/18/14	4/3/17	Complete Genome	"Department of Molecular Bacteriology,  Research Institute for Microbial Diseases, Osaka University"	SAMD00000333	GCA_000829175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/175/GCA_000829175.1_ASM82917v1	"835,988,424,831,150"	S798
Methylobacterium extorquens PA1	419610	PRJNA18637	18637	Proteobacteria	Alphaproteobacteria	5.47115	68.2	chromosome:NC_010172.1/CP000908.1	-	1	5040	4830	12/20/07	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000030	GCA_000018845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/845/GCA_000018845.1_ASM1884v1	-	PA1
Mycobacterium sp. KMS	189918	PRJNA16081	16081	Terrabacteria group	Actinobacteria	6.25608	68.1928	chromosome:NC_008705.1/CP000518.1; plasmid pMKMS01:NC_008703.1/CP000519.1; plasmid pMKMS02:NC_008704.1/CP000520.1	-	3	6103	5968	12/20/06	5/18/17	Complete Genome	DOE Joint Genome Institute	SAMN02598356	GCA_000015405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/405/GCA_000015405.1_ASM1540v1	-	KMS
Burkholderia pseudomallei	28450	PRJNA244403	244403	Proteobacteria	Betaproteobacteria	7.20236	68.1791	chromosome I:NZ_CP009585.1/CP009585.1; chromosome II:NZ_CP009586.1/CP009586.1	-	2	7397	6900	3/20/15	3/26/17	Complete Genome	Los Alamos National Laboratory	SAMN02849693	GCA_000757015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/015/GCA_000757015.2_ASM75701v2	25931592	PHLS 112
Lentisphaera araneosa HTCC2155	313628	PRJNA13437	13437	PVC group	Lentisphaerae	6.02318	41	-	ABCK01	81	4952	4744	6/19/07	5/18/17	Contig	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436148	GCA_000170755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/755/GCA_000170755.1_ASM17075v1	20363947	HTCC2155
Burkholderia pseudomallei HBPUB10303a	1306419	PRJNA244524	244524	Proteobacteria	Betaproteobacteria	7.17818	68.178	chromosome 1:NZ_CP008894.1/CP008894.1; chromosome 2:NZ_CP008893.1/CP008893.1	-	2	7359	6869	9/18/14	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN02902612	GCA_000755905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/905/GCA_000755905.1_ASM75590v1	25414490	HBPUB10303a
Burkholderia glumae LMG 2196 = ATCC 33617	1176492	PRJNA259679	259679	Proteobacteria	Betaproteobacteria	6.82073	68.1733	chromosome I:NZ_CP009435.1/CP009435.1; chromosome II:NZ_CP009434.1/CP009434.1; plasmid pBIN_1:NZ_CP009433.1/CP009433.1; plasmid pBIN_2:NZ_CP009432.1/CP009432.1	-	4	5960	5609	3/24/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03012983	GCA_000960995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/995/GCA_000960995.1_ASM96099v1	25931592	ATCC 33617
Burkholderia pseudomallei MSHR62	1435984	PRJNA231467	231467	Proteobacteria	Betaproteobacteria	7.22543	68.1653	chromosome 1:NZ_CP009235.1/CP009235.1; chromosome 2:NZ_CP009234.1/CP009234.1	-	2	7442	6893	10/31/14	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN02990927	GCA_000770395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/395/GCA_000770395.1_ASM77039v1	25676747	MSHR62
Azospirillum thiophilum	528244	PRJNA292868	292868	Proteobacteria	Alphaproteobacteria	7.60946	68.1638	chromosome 1:NZ_CP012401.1/CP012401.1; chromosome 2:NZ_CP012402.1/CP012402.1; chromosome 3:NZ_CP012403.1/CP012403.1; chromosome 4:NZ_CP012404.1/CP012404.1; chromosome 5:NZ_CP012405.1/CP012405.1; chromosome 6:NZ_CP012406.1/CP012406.1; chromosome 7:NZ_CP012407.1/CP012407.1; chromosome 8:NZ_CP012408.1/CP012408.1	-	8	6684	6449	10/2/15	4/11/17	Complete Genome	New England Biolabs	SAMN03993951	GCA_001305595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/305/595/GCA_001305595.1_ASM130559v1	26744373	BV-S
Burkholderia pseudomallei 1026b	884204	PRJNA178698	178698	Proteobacteria	Betaproteobacteria	7.23767	68.1608	chromosome 1:NZ_CP004379.1/CP004379.1; chromosome 2:NZ_CP004380.1/CP004380.1	-	2	7494	6968	3/20/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03097397	GCA_000959125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/125/GCA_000959125.1_ASM95912v1	25931592	1026b
Burkholderia pseudomallei	28450	PRJNA244419	244419	Proteobacteria	Betaproteobacteria	7.23139	68.1604	chromosome 1:NZ_CP008834.1/CP008834.1; chromosome 2:NZ_CP008835.1/CP008835.1	-	2	7509	6994	9/18/14	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN02866376	GCA_000756085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/085/GCA_000756085.1_ASM75608v1	25414490	BGR
Oceanicaulis alexandrii DSM 11625	1122613	PRJNA185364	185364	Proteobacteria	Alphaproteobacteria	3.01843	62.5	-	ATUP01	4	2858	2793	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440569	GCA_000420265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/265/GCA_000420265.1_ASM42026v1	-	DSM 11625
Pseudooceanicola batsensis HTCC2597	252305	PRJNA13449	13449	Proteobacteria	Alphaproteobacteria	4.44039	66.1	-	AAMO01	7	4178	4067	1/5/06	5/19/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436081	GCA_000152725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/725/GCA_000152725.1_ASM15272v1	20418400	HTCC2597
Oceanicola granulosus HTCC2516	314256	PRJNA13450	13450	Proteobacteria	Alphaproteobacteria	4.05314	70.3	-	AAOT01	9	3820	3645	3/1/06	4/17/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436142	GCA_000153305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/305/GCA_000153305.1_ASM15330v1	20418400	HTCC2516
Polaribacter irgensii 23-P	313594	PRJNA13451	13451	FCB group	Bacteroidetes/Chlorobi group	2.76346	34.6	-	AAOG01	2	2468	2400	2/24/06	4/7/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436114	GCA_000153225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/225/GCA_000153225.1_ASM15322v1	-	23-P
Burkholderia pseudomallei 1026b	884204	PRJNA52063	52063	Proteobacteria	Betaproteobacteria	7.23142	68.1604	chromosome 1:NC_017831.1/CP002833.1; chromosome 2:NC_017832.1/CP002834.1	-	2	7501	6999	4/30/12	5/18/17	Complete Genome	University of Washington	SAMN02604257	GCA_000260515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/515/GCA_000260515.1_ASM26051v1	22615773	1026b
Nodularia spumigena CCY9414	313624	PRJNA185469	185469	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.46227	41.2	chromosome:NZ_CP007203.1/CP007203.2	-	1	4839	4566	2/14/14	4/10/17	Chromosome	University of Freiburg	SAMN01915661	GCA_000340565.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/565/GCA_000340565.3_ASM34056v3	23555932	CCY9414
Pseudoalteromonas tunicata D2	87626	PRJNA13456	13456	Proteobacteria	Gammaproteobacteria	4.99481	39.9	-	AAOH01	37	4352	4154	2/24/06	5/19/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN00622973	GCA_000153245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/245/GCA_000153245.1_ASM15324v1	-	D2
Burkholderia pseudomallei	28450	PRJEB6658	254237	Proteobacteria	Betaproteobacteria	7.16167	68.1482	chromosome 1:NZ_LK936442.1/LK936442.1; chromosome 2:NZ_LK936443.1/LK936443.1	-	2	7384	6853	7/11/14	3/25/17	Complete Genome	WTSI	SAMEA807056	GCA_000953095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/095/GCA_000953095.1_BP_3921g	-	3921
Burkholderia pseudomallei	28450	PRJNA339871	339871	Proteobacteria	Betaproteobacteria	7.2485	68.1354	chromosome 1:NZ_CP017044.1/CP017044.1; chromosome 2:NZ_CP017045.1/CP017045.1	-	2	7507	6921	1/30/17	7/24/17	Complete Genome	Menzies School of Health Research	SAMN05607057	GCA_001975065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/065/GCA_001975065.1_ASM197506v1	28385830	MSHR7929
Arthrospira platensis NIES-39	696747	PRJDA42161	42161	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.78843	44.3	chromosome:NC_016640.1/AP011615.1	-	1	6666	5872	3/26/10	4/7/17	Chromosome	National Institute of Technology and Evaluation	SAMD00060970	GCA_000210375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/375/GCA_000210375.1_ASM21037v1	20203057	NIES-39
Burkholderia pseudomallei HBPUB10134a	1306418	PRJNA244525	244525	Proteobacteria	Betaproteobacteria	7.2184	68.1217	chromosome 1:NZ_CP008911.1/CP008911.1; chromosome 2:NZ_CP008912.1/CP008912.1	-	2	7387	6905	9/18/14	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN02902608	GCA_000755925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/925/GCA_000755925.1_ASM75592v1	25414490	HBPUB10134a
Burkholderia pseudomallei	28450	PRJNA352974	352974	Proteobacteria	Betaproteobacteria	7.20086	68.1214	chromosome 1:CP018400.1; chromosome 2:CP018401.1	-	2	7277	6611	4/26/17	4/26/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06007570	GCA_002111225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/225/GCA_002111225.1_ASM211122v1	-	2013746811
Burkholderia pseudomallei	28450	PRJNA352974	352974	Proteobacteria	Betaproteobacteria	7.19114	68.1061	chromosome 1:NZ_CP018371.1/CP018371.1; chromosome 2:NZ_CP018372.1/CP018372.1	-	2	7394	6791	4/26/17	5/1/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06007556	GCA_002111345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/345/GCA_002111345.1_ASM211134v1	-	2002721171
Burkholderia pseudomallei	28450	PRJNA352974	352974	Proteobacteria	Betaproteobacteria	7.18608	68.1058	chromosome 1:NZ_CP018387.1/CP018387.1; chromosome 2:NZ_CP018388.1/CP018388.1	-	2	7409	6799	4/26/17	5/1/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06007564	GCA_002111145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/145/GCA_002111145.1_ASM211114v1	-	2010007509
Burkholderia pseudomallei	28450	PRJNA274367	274367	Proteobacteria	Betaproteobacteria	7.26002	68.1035	chromosome 1:NZ_CP012041.1/CP012041.1; chromosome 2:NZ_CP012042.1/CP012042.1	-	2	7499	6817	10/16/15	4/10/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03451120	GCA_001318245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/245/GCA_001318245.1_ASM131824v1	26634765	Bp1651
Mycobacterium colombiense CECT 3035	1041522	PRJNA383253	383253	Terrabacteria group	Actinobacteria	5.58164	68.1	chromosome:NZ_CP020821.1/CP020821.1	-	1	5289	4940	4/24/17	4/26/17	Complete Genome	National University of Colombia	SAMN06760893	GCA_002105755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/755/GCA_002105755.1_ASM210575v1	27818776	CECT 3035
Nitrococcus mobilis Nb-231	314278	PRJNA13475	13475	Proteobacteria	Gammaproteobacteria	3.62368	59.9	-	AAOF01	9	3393	3183	2/24/06	4/17/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436141	GCA_000153205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/205/GCA_000153205.1_ASM15320v1	-	Nb-231
Microbacterium sp. 1.5R	1916917	PRJNA352825	352825	Terrabacteria group	Actinobacteria	3.62032	68.1	chromosome:NZ_CP018151.1/CP018151.1	-	1	3470	3383	12/6/16	4/16/17	Complete Genome	Austrian Institute of Technology	SAMN05992342	GCA_001889265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/265/GCA_001889265.1_ASM188926v1	-	1.5R
Nocardia seriolae	37332	PRJDB5277	356038	Terrabacteria group	Actinobacteria	8.12173	68.1	chromosome:AP017900.1	-	1	7607	7533	12/1/16	3/10/17	Complete Genome	"Research Center for Bioinformatics and Biosciences, National Research Institute of Fisheries Science, Japan Fisheries Research and Education Agency"	SAMD00066002	GCA_002356035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/035/GCA_002356035.1_ASM235603v1	-	UTF1
Nocardia soli	134962	PRJNA353759	353759	Terrabacteria group	Actinobacteria	7.31011	68.1	chromosome:NZ_CP018082.1/CP018082.1	-	1	6588	6342	11/28/16	4/17/17	Complete Genome	"Northwest Institute of Eco-Environment and Resources,CAS"	SAMN06019995	GCA_001886715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/715/GCA_001886715.1_ASM188671v1	-	Y48
Olsenella sp. Marseille-P2300	1805478	PRJEB16351	349290	Terrabacteria group	Actinobacteria	2.17674	68.1	chromosome contig00001:NZ_LT635455.1/LT635455.1	-	1	1992	1898	11/23/16	4/16/17	Complete Genome	URMITE	SAMEA4554851	GCA_900119915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/915/GCA_900119915.1_PRJEB16351	-	Marseille-P2300
Nocardia seriolae	37332	PRJNA325707	325707	Terrabacteria group	Actinobacteria	8.30452	68.1	chromosome:NZ_CP017839.1/CP017839.1	-	1	7716	7272	11/3/16	4/13/17	Complete Genome	National Institute of Fisheries Science	SAMN05225369	GCA_001865855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/855/GCA_001865855.1_ASM186585v1	-	EM150506
Rhodobacteraceae bacterium HTCC2083	314270	PRJNA13508	13508	Proteobacteria	Alphaproteobacteria	4.01842	53.3	-	ABXE01	5	4076	3864	9/23/08	4/17/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436225	GCA_000156115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/115/GCA_000156115.1_ASM15611v1	21036993	HTCC2083
Actinoalloteichus hymeniacidonis	340345	PRJNA273752	273752	Terrabacteria group	Actinobacteria	6.30639	68.1	chromosome:NZ_CP014859.1/CP014859.1	-	1	5456	5264	9/28/16	4/17/17	Complete Genome	Bielefeld University	SAMN03295676	GCA_001747425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/425/GCA_001747425.1_ASM174742v1	-	HPA177(T) (=DSM 45092(T))
Neptuniibacter caesariensis	207954	PRJNA13561	13561	Proteobacteria	Gammaproteobacteria	3.92476	46.7	-	AAOW01	6	3668	3574	3/1/06	4/17/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436143	GCA_000153345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/345/GCA_000153345.1_ASM15334v1	-	MED92
Bermanella marisrubri	207949	PRJNA13562	13562	Proteobacteria	Gammaproteobacteria	3.55224	44	-	AAQH01	26	3316	3215	4/28/06	4/17/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436132	GCA_000153565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/565/GCA_000153565.1_ASM15356v1	-	RED65
Photobacterium angustum S14	314292	PRJNA13567	13567	Proteobacteria	Gammaproteobacteria	5.18154	39.8	-	AAOJ01	25	4596	4353	3/24/06	5/19/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436086	GCA_000153265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/265/GCA_000153265.1_ASM15326v1	19805210	S14
Blastopirellula marina DSM 3645	314230	PRJNA13488	13488	PVC group	Planctomycetes	6.66385	57	-	AANZ01	3	5502	5333	2/15/06	5/18/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436112	GCA_000153105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/105/GCA_000153105.1_ASM15310v1	-	DSM 3645
Bordetella parapertussis	519	PRJNA287884	287884	Proteobacteria	Betaproteobacteria	4.77371	68.1	chromosome:NZ_CP016342.1/CP016342.1	-	1	4492	4170	8/12/16	4/13/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05333721	GCA_001704255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/255/GCA_001704255.1_ASM170425v1	27795250	H904
Leeuwenhoekiella blandensis MED217	398720	PRJNA13573	13573	FCB group	Bacteroidetes/Chlorobi group	4.24456	39.8	-	AANC01	1	3680	3595	1/27/06	6/19/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436111	GCA_000152985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/985/GCA_000152985.1_ASM15298v1	17215843	MED217
Pelagibaca bermudensis HTCC2601	314265	PRJNA13574	13574	Proteobacteria	Alphaproteobacteria	5.48298	66.2	-	AATQ01	6	5114	4879	9/15/06	5/19/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436105	GCA_000153725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/725/GCA_000153725.1_ASM15372v1	20729358	HTCC2601
Flavobacteria bacterium BBFL7	156586	PRJNA13604	13604	FCB group	Bacteroidetes/Chlorobi group	3.10342	35	-	AAPD01	7	2788	2738	3/14/06	4/17/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436116	GCA_000153385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/385/GCA_000153385.1_ASM15338v1	-	BBFL7
marine gamma proteobacterium HTCC2143	247633	PRJNA13605	13605	Proteobacteria	Gammaproteobacteria	3.92563	47.2	-	AAVT01	30	3574	3465	12/15/06	4/17/17	Contig	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436155	GCA_000169075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/075/GCA_000169075.1_ASM16907v1	20601481	HTCC2143
gamma proteobacterium HTCC2207	314287	PRJNA16658	16658	Proteobacteria	Gammaproteobacteria	2.63427	49.4	-	AAPI01	6	2385	2309	3/23/06	4/17/17	Scaffold	J. Craig Venter Institute	SAMN02436104	GCA_000153445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/445/GCA_000153445.1_ASM15344v1	-	HTCC2207
Aurantimonas manganoxydans SI85-9A1	287752	PRJNA13607	13607	Proteobacteria	Alphaproteobacteria	4.32681	66.7	-	AAPJ01	22	4018	3880	3/23/06	5/18/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436161	GCA_000153465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/465/GCA_000153465.1_ASM15346v1	18344346	SI85-9A1
Maritimibacter alkaliphilus HTCC2654	314271	PRJNA13614	13614	Proteobacteria	Alphaproteobacteria	4.53611	64.1	-	AAMT01	7	4466	4342	1/10/06	5/19/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436110	GCA_000152805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/805/GCA_000152805.1_ASM15280v1	20729358	HTCC2654
Mariprofundus ferrooxydans PV-1	314345	PRJNA13615	13615	Proteobacteria	Zetaproteobacteria	2.99273	53.8	-	AATS01	4	2790	2694	9/15/06	4/7/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436127	GCA_000153765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/765/GCA_000153765.1_ASM15376v1	-	PV-1
Bordetella bronchiseptica	518	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	5.33866	68.1	chromosome:CP014013.1	-	1	5038	4596	2/11/16	2/11/16	Complete Genome	US Food and Drug Administration 	SAMN03996258	GCA_001559055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/055/GCA_001559055.1_ASM155905v1	-	ATCC:BAA-588D-5
Xanthomonas translucens pv. undulosa	487909	PRJNA248137	248137	Proteobacteria	Gammaproteobacteria	4.56114	68.1	chromosome:NZ_CP008714.1/CP008714.1	-	1	3857	3576	6/8/15	4/3/17	Complete Genome	Kansas State University	SAMN02797519	GCA_001021935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/935/GCA_001021935.1_ASM102193v1	26729225	Xtu 4699
Bordetella bronchiseptica 253	568707	PRJEB138	178265	Proteobacteria	Betaproteobacteria	5.26438	68.1	chromosome:NC_019382.1/HE965806.1	-	1	4842	4781	10/11/12	8/28/16	Complete Genome	WTSI	SAMEA2272388	GCA_000318015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/015/GCA_000318015.1_ASM31801v1	23051057	253
Mycobacterium intracellulare ATCC 13950	487521	PRJNA82157	82157	Terrabacteria group	Actinobacteria	5.4024	68.1	chromosome:NC_016946.1/CP003322.1	-	1	5117	5017	2/29/12	5/19/17	Complete Genome	"Department of Microbiology and Immunology, Seoul National University"	SAMN02603186	GCA_000277125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/125/GCA_000277125.1_ASM27712v1	22535933	ATCC 13950
Mycobacterium paraintracellulare	1138383	PRJNA82155	82155	Terrabacteria group	Actinobacteria	5.50109	68.1	chromosome:NC_016948.1/CP003324.1	-	1	5209	5078	2/29/12	4/17/17	Complete Genome	"Department of Microbiology and Immunology, Seoul National University"	SAMN02603185	GCA_000276825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/825/GCA_000276825.1_ASM27682v1	22628501	MOTT64
Mycobacterium intracellulare MOTT-02	1138382	PRJNA82153	82153	Terrabacteria group	Actinobacteria	5.4097	68.1	chromosome:NC_016947.1/CP003323.1	-	1	5113	4990	2/29/12	5/19/17	Complete Genome	"Department of Microbiology and Immunology, Seoul National University"	SAMN02603184	GCA_000277145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/145/GCA_000277145.1_ASM27714v1	22535946	MOTT-02
Marinithermus hydrothermalis DSM 14884	869210	PRJNA50827	50827	Terrabacteria group	Deinococcus-Thermus	2.26917	68.1	chromosome:NC_015387.1/CP002630.1	-	1	2281	2174	4/7/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713602	GCA_000195335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/335/GCA_000195335.1_ASM19533v1	22675595	DSM 14884
Truepera radiovictrix DSM 17093	649638	PRJNA38371	38371	Terrabacteria group	Deinococcus-Thermus	3.2604	68.1	chromosome:NC_014221.1/CP002049.1	-	1	3006	2916	5/28/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598522	GCA_000092425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/425/GCA_000092425.1_ASM9242v1	21475591	DSM 17093
Stackebrandtia nassauensis DSM 44728	446470	PRJNA19713	19713	Terrabacteria group	Actinobacteria	6.84156	68.1	chromosome:NC_013947.1/CP001778.1	-	1	6476	6304	3/5/10	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598427	GCA_000024545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/545/GCA_000024545.1_ASM2454v1	21304662	DSM 44728
Sphaerobacter thermophilus DSM 20745	479434	PRJNA21087	21087	Terrabacteria group	Chloroflexi	3.99376	68.1	chromosome 1:NC_013523.1/CP001823.1; chromosome 2:NC_013524.1/CP001824.1	-	2	3528	3445	11/23/09	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598446	GCA_000024985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/985/GCA_000024985.1_ASM2498v1	21304676	DSM 20745
Bordetella parapertussis 12822	257311	PRJNA25	25	Proteobacteria	Betaproteobacteria	4.77355	68.1	chromosome:NC_002928.3/BX470249.1	-	1	4490	4168	11/6/01	5/28/17	Complete Genome	Sanger Institute	SAMEA1705915	GCA_000195695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/695/GCA_000195695.1_ASM19569v1	12910271	12822
Bordetella bronchiseptica RB50	257310	PRJNA24	24	Proteobacteria	Betaproteobacteria	5.33918	68.1	chromosome:NC_002927.3/BX470250.1	-	1	5090	4993	11/6/01	5/18/17	Complete Genome	Sanger Institute	SAMEA1705943	GCA_000195675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/675/GCA_000195675.1_ASM19567v1	12910271	RB50
Burkholderia pseudomallei MSHR840	1249475	PRJNA238264	238264	Proteobacteria	Betaproteobacteria	7.12981	68.0923	chromosome I:NZ_CP009474.1/CP009474.1; chromosome II:NZ_CP009473.1/CP009473.1	-	2	7339	6690	3/20/15	4/10/17	Complete Genome	Los Alamos National Laboratory	SAMN03068727	GCA_000959185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/185/GCA_000959185.1_ASM95918v1	25931592	MSHR840
Burkholderia pseudomallei NAU35A-3	1249477	PRJNA178677	178677	Proteobacteria	Betaproteobacteria	7.20408	68.0804	chromosome 1:NZ_CP004377.1/CP004377.1; chromosome 2:NZ_CP004378.1/CP004378.1	-	2	7431	6840	10/8/14	4/10/17	Complete Genome	Los Alamos National Laboratory	SAMN03097381	GCA_000764575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/575/GCA_000764575.1_ASM76457v1	25931592	NAU35A-3
Burkholderia pseudomallei	28450	PRJNA339871	339871	Proteobacteria	Betaproteobacteria	7.30061	68.0781	chromosome 1:NZ_CP017046.1/CP017046.1; chromosome 2:NZ_CP017047.1/CP017047.1	-	2	7536	6943	1/30/17	7/24/17	Complete Genome	Menzies School of Health Research	SAMN05607056	GCA_001975085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/085/GCA_001975085.1_ASM197508v1	28385830	MSHR6755
Burkholderia pseudomallei	28450	PRJNA294029	294029	Proteobacteria	Betaproteobacteria	7.26651	68.0777	chromosome 1:NZ_CP012515.1/CP012515.1; chromosome 2:NZ_CP012516.1/CP012516.1	-	2	7486	6901	9/2/15	3/26/17	Complete Genome	National Kaohsiung Normal University	SAMN04009759	GCA_001277875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/875/GCA_001277875.1_ASM127787v1	26472836	vgh16R
Burkholderia pseudomallei	28450	PRJNA294030	294030	Proteobacteria	Betaproteobacteria	7.26681	68.0777	chromosome 1:NZ_CP012517.1/CP012517.1; chromosome 2:NZ_CP012518.1/CP012518.1	-	2	7486	6867	9/2/15	4/10/17	Complete Genome	National Kaohsiung Normal University	SAMN04009760	GCA_001277895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/895/GCA_001277895.1_ASM127789v1	26472836	vgh16W
Burkholderia pseudomallei	28450	PRJNA339871	339871	Proteobacteria	Betaproteobacteria	7.31738	68.0776	chromosome 1:NZ_CP017048.1/CP017048.1; chromosome 2:NZ_CP017049.1/CP017049.1	-	2	7554	6935	1/30/17	7/24/17	Complete Genome	Menzies School of Health Research	SAMN05607051	GCA_001975105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/105/GCA_001975105.1_ASM197510v1	28385830	MSHR5864
Burkholderia pseudomallei	28450	PRJNA338800	338800	Proteobacteria	Betaproteobacteria	7.29095	68.0776	chromosome 1:NZ_CP016909.1/CP016909.1; chromosome 2:NZ_CP016910.1/CP016910.1	-	2	7544	6913	11/30/16	3/28/17	Complete Genome	USAMRIID	SAMN05571215	GCA_001887555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/555/GCA_001887555.1_ASM188755v1	-	Burk178-Type1
Burkholderia pseudomallei	28450	PRJNA338800	338800	Proteobacteria	Betaproteobacteria	7.29088	68.0776	chromosome 1:NZ_CP016911.1/CP016911.1; chromosome 2:NZ_CP016912.1/CP016912.1	-	2	7547	6913	11/30/16	3/28/17	Complete Genome	USAMRIID	SAMN05571216	GCA_001887575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/575/GCA_001887575.1_ASM188757v1	-	Burk178-Type2
Burkholderia pseudomallei MSHR5848	1306420	PRJNA244424	244424	Proteobacteria	Betaproteobacteria	7.29043	68.0776	chromosome 1:NZ_CP008909.1/CP008909.1; chromosome 2:NZ_CP008910.1/CP008910.1	-	2	7540	6938	9/18/14	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN02902465	GCA_000755965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/965/GCA_000755965.1_ASM75596v1	25414490	MSHR5848
Gimesia maris DSM 8797	344747	PRJNA15662	15662	PVC group	Planctomycetes	7.778	50.5	-	ABCE01	125	6123	5865	6/15/07	5/19/17	Contig	Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436120	GCA_000181475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/181/475/GCA_000181475.1_ASM18147v1	-	DSM 8797
Burkholderia pseudomallei	28450	PRJNA352974	352974	Proteobacteria	Betaproteobacteria	7.2345	68.069	chromosome 1:NZ_CP018418.1/CP018418.1; chromosome 2:NZ_CP018419.1/CP018419.1	-	2	7447	6836	4/26/17	5/1/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06007559	GCA_002111105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/105/GCA_002111105.1_ASM211110v1	-	2002734728
Methylobacterium extorquens CM4	440085	PRJNA19527	19527	Proteobacteria	Alphaproteobacteria	6.18073	68.0674	chromosome:NC_011757.1/CP001298.1; plasmid pCMU01:NC_011758.1/CP001299.1; plasmid pCMU02:NC_011760.1/CP001300.1	-	3	5765	5498	12/19/08	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000037	GCA_000021845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/845/GCA_000021845.1_ASM2184v1	22887658	CM4
Burkholderia pseudomallei	28450	PRJNA352974	352974	Proteobacteria	Betaproteobacteria	7.2705	68.0658	chromosome 1:NZ_CP018398.1/CP018398.1; chromosome 2:NZ_CP018399.1/CP018399.1	-	2	7481	6887	4/26/17	5/1/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06007569	GCA_002111205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/205/GCA_002111205.1_ASM211120v1	-	2013746777
Burkholderia pseudomallei 406e	360118	PRJNA238550	238550	Proteobacteria	Betaproteobacteria	7.27151	68.0654	chromosome 1:NZ_CP009298.1/CP009298.1; chromosome 2:NZ_CP009297.1/CP009297.1	-	2	7451	6923	3/20/15	3/26/17	Complete Genome	Los Alamos National Laboratory	SAMN03010441	GCA_000959145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/145/GCA_000959145.1_ASM95914v1	25931592	406e
delta proteobacterium MLMS-1	262489	PRJNA15764	15764	Proteobacteria	delta/epsilon subdivisions	6.05891	60.1	-	AAQF01	545	6243	5328	4/26/06	5/19/17	Contig	DOE Joint Genome Institute	SAMN02441779	GCA_000168275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/275/GCA_000168275.1_ASM16827v1	-	MLMS-1
Burkholderia pseudomallei	28450	PRJNA244681	244681	Proteobacteria	Betaproteobacteria	7.2727	68.0652	chromosome 1:NZ_CP009128.1/CP009128.1; chromosome 2:NZ_CP009127.1/CP009127.1	-	2	7452	6927	9/18/14	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN02945026	GCA_000755825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/825/GCA_000755825.1_ASM75582v1	25414490	BSR
Tistrella mobilis KA081020-065	1110502	PRJNA76349	76349	Proteobacteria	Alphaproteobacteria	6.51298	68.058	chromosome:NC_017956.1/CP003236.1; plasmid pTM1:NC_017957.2/CP003237.2; plasmid pTM2:NC_017966.1/CP003238.1; plasmid pTM3:NC_017958.1/CP003239.1; plasmid pTM4:NC_017959.1/CP003240.1	-	5	5873	5729	5/25/12	5/19/17	Complete Genome	the Hong Kong University of Science and Technology	SAMN02603926	GCA_000264455.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/455/GCA_000264455.2_ASM26445v2	22458477	KA081020-065
Burkholderia pseudomallei K96243	272560	PRJNA235893	235893	Proteobacteria	Betaproteobacteria	7.24761	68.0502	chromosome I:NZ_CP009538.1/CP009538.1; chromosome II:NZ_CP009537.1/CP009537.1	-	2	7496	7017	3/20/15	3/26/17	Complete Genome	Los Alamos National Laboratory	SAMN03075610	GCA_000959285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/285/GCA_000959285.1_ASM95928v1	25931592	K96243
Burkholderia pseudomallei K96243	272560	PRJNA178	178	Proteobacteria	Betaproteobacteria	7.24755	68.0502	chromosome 1:NC_006350.1/BX571965.1; chromosome 2:NC_006351.1/BX571966.1	-	2	5935	5726	9/16/04	8/3/16	Complete Genome	Sanger Institute	SAMEA1705938	GCA_000011545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/545/GCA_000011545.1_ASM1154v1	15377794	K96243
Thermus aquaticus Y51MC23	498848	PRJNA274060	274060	Terrabacteria group	Deinococcus-Thermus	2.33864	68.0413	chromosome:NZ_CP010822.1/CP010822.1; plasmid pTA14:NZ_CP010823.1/CP010823.1; plasmid pTA16:NZ_CP010824.1/CP010824.1; plasmid pTA69:NZ_CP010825.1/CP010825.1; plasmid pTA78:NZ_CP010826.1/CP010826.1	-	5	2529	2394	10/19/15	4/11/17	Complete Genome	Lucigen Corp.	SAMN02441811	GCA_001399775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/775/GCA_001399775.1_ASM139977v1	-	Y51MC23
Burkholderia pseudomallei A79A	1439855	PRJNA231210	231210	Proteobacteria	Betaproteobacteria	7.27244	68.0346	chromosome 1:NZ_CP009165.1/CP009165.1; chromosome 2:NZ_CP009164.1/CP009164.1	-	2	7491	6913	10/31/14	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN02951655	GCA_000770535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/535/GCA_000770535.1_ASM77053v1	25676747	A79A
Burkholderia pseudomallei B03	1439854	PRJNA231209	231209	Proteobacteria	Betaproteobacteria	7.26476	68.0345	chromosome 1:NZ_CP009151.1/CP009151.1; chromosome 2:NZ_CP009150.1/CP009150.1	-	2	7481	6912	10/31/14	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN02951654	GCA_000770455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/455/GCA_000770455.1_ASM77045v1	25676747	B03
Burkholderia pseudomallei 576	557724	PRJNA244408	244408	Proteobacteria	Betaproteobacteria	7.2666	68.034	chromosome 1:NZ_CP008777.1/CP008777.1; chromosome 2:NZ_CP008778.1/CP008778.1	-	2	7484	6928	9/18/14	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN02866333	GCA_000756185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/185/GCA_000756185.1_ASM75618v1	25414490	576
Burkholderia pseudomallei MSHR511	1249474	PRJNA178674	178674	Proteobacteria	Betaproteobacteria	7.31609	68.022	chromosome I:NZ_CP004023.1/CP004023.1; chromosome II:NZ_CP004024.1/CP004024.1	-	2	7500	6923	1/16/14	3/24/17	Complete Genome	Los Alamos National Laboratory	SAMN02641523	GCA_000520895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/895/GCA_000520895.1_ASM52089v1	-	MSHR511
Burkholderia pseudomallei MSHR146	1249471	PRJNA178671	178671	Proteobacteria	Betaproteobacteria	7.3131	68.0219	chromosome I:NZ_CP004042.1/CP004042.1; chromosome II:NZ_CP004043.1/CP004043.1	-	2	7503	6924	1/22/14	3/24/17	Complete Genome	Los Alamos National Laboratory	SAMN02641522	GCA_000521645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/645/GCA_000521645.1_ASM52164v1	-	MSHR146
Leuconostoc gelidum subsp. gasicomitatum	115778	PRJEB12226	324802	Terrabacteria group	Firmicutes	1.99276	36.5	-	FBTC01	31	1978	1884	6/8/16	7/28/17	Scaffold	UNIVERSITY OF HELSINKI	SAMEA3718674	GCA_900009505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/505/GCA_900009505.1_ASM90000950v1	-	C120c
Burkholderia pseudomallei NAU20B-16	1249476	PRJNA178676	178676	Proteobacteria	Betaproteobacteria	7.31385	68.0219	chromosome I:NZ_CP004003.1/CP004003.1; chromosome II:NZ_CP004004.1/CP004004.1	-	2	7505	6922	12/26/13	3/24/17	Complete Genome	Los Alamos National Laboratory	SAMN02641524	GCA_000511915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/915/GCA_000511915.1_ASM51191v1	-	NAU20B-16
Cupriavidus taiwanensis LMG 19424	977880	PRJNA15733	15733	Proteobacteria	Betaproteobacteria	6.47652	66.9835	chromosome 1:NC_010528.1/CU633749.1; chromosome 2:NC_010530.1/CU633750.1; plasmid pRALTA:NC_010529.1/CU633751.1	-	3	5918	5719	3/26/08	5/18/17	Chromosome	Genoscope	SAMEA3138280	GCA_000069785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/069/785/GCA_000069785.1_ASM6978v1	18490699	LMG19424
Burkholderia pseudomallei MSHR5855	1306421	PRJNA244422	244422	Proteobacteria	Betaproteobacteria	7.2978	68.0218	chromosome 1:NZ_CP008784.1/CP008784.1; chromosome 2:NZ_CP008783.1/CP008783.1	-	2	7544	6935	9/18/14	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN02866394	GCA_000756065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/065/GCA_000756065.1_ASM75606v1	25414490	MSHR5855
Burkholderia pseudomallei TSV 48	1435365	PRJNA231196	231196	Proteobacteria	Betaproteobacteria	7.33762	68.0199	chromosome 1:NZ_CP009161.1/CP009161.1; chromosome 2:NZ_CP009160.1/CP009160.1	-	2	7523	6884	10/31/14	4/10/17	Complete Genome	Los Alamos National Laboratory	SAMN02951644	GCA_000770495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/495/GCA_000770495.1_ASM77049v1	25676747	TSV 48
Burkholderia pseudomallei	28450	PRJNA349440	349440	Proteobacteria	Betaproteobacteria	7.28121	68.0191	chromosome 1:NZ_CP018054.1/CP018054.1; chromosome 2:NZ_CP018055.1/CP018055.1	-	2	7507	6865	11/22/16	8/31/17	Complete Genome	"Friedrich Loeffler Institut, Federal Research Institute for Animal Health"	SAMN05930279	GCA_001885195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/195/GCA_001885195.1_ASM188519v1	-	VB976100
Burkholderia pseudomallei	28450	PRJNA352974	352974	Proteobacteria	Betaproteobacteria	7.23549	68.0104	chromosome 1:NZ_CP018369.1/CP018369.1; chromosome 2:NZ_CP018370.1/CP018370.1	-	2	7426	6836	4/26/17	5/1/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06007555	GCA_002111325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/325/GCA_002111325.1_ASM211132v1	-	2002721123
Methylobacterium extorquens DM4	661410	PRJNA16093	16093	Proteobacteria	Alphaproteobacteria	6.12385	68.0076	chromosome:NC_012988.1/FP103042.2; plasmid p1METDI:NC_012987.1/FP103043.1; plasmid p2METDI:NC_012989.1/FP103044.1	-	3	5763	5503	7/17/09	5/19/17	Complete Genome	Genoscope	SAMEA3138288	GCA_000083545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/083/545/GCA_000083545.1_ASM8354v1	-	DM4
Burkholderia pseudomallei Pasteur 52237	331978	PRJNA244405	244405	Proteobacteria	Betaproteobacteria	7.32532	68.0043	chromosome 1:NZ_CP009899.1/CP009899.1; chromosome 2:NZ_CP009898.1/CP009898.1	-	2	7507	6992	3/20/15	3/26/17	Complete Genome	Los Alamos National Laboratory	SAMN02849712	GCA_000757035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/035/GCA_000757035.2_ASM75703v2	25931592	Pasteur 52237
Variovorax boronicumulans	436515	PRJNA400539	400539	Proteobacteria	Betaproteobacteria	7.1379	68	chromosome:NZ_CP023284.1/CP023284.1	-	1	6607	6237	9/12/17	9/18/17	Complete Genome	Nanjing normal university	SAMN07569770	GCA_002291405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/405/GCA_002291405.1_ASM229140v1	-	J1
Yersinia mollaretii ATCC 43969	349967	PRJNA16105	16105	Proteobacteria	Gammaproteobacteria	4.54946	49	-	AALD02	179	4112	3912	10/19/05	5/19/17	Contig	Naval Medical Research Center	SAMN00005358	GCA_000167995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/995/GCA_000167995.1_ASM16799v1	-	ATCC 43969
Mycobacterium intracellulare	1767	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.43206	68	chromosome:NZ_CP023146.1/CP023146.1	-	1	5157	5023	9/5/17	9/7/17	Complete Genome	University of Michigan Medical School	SAMN07528783	GCA_002285695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/695/GCA_002285695.1_ASM228569v1	-	FLAC0133
Mycobacterium yongonense	1203599	PRJNA308264	308264	Terrabacteria group	Actinobacteria	5.44554	68	chromosome:NZ_CP015964.1/CP015964.1	-	1	5126	4932	5/17/17	5/24/17	Complete Genome	Seoul National University College of Medicine	SAMN04390158	GCA_002148175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/175/GCA_002148175.1_ASM214817v1	-	Asan 36912
Mycobacterium yongonense	1203599	PRJNA308265	308265	Terrabacteria group	Actinobacteria	5.43515	68	chromosome:NZ_CP015965.1/CP015965.1	-	1	5114	4952	5/17/17	5/24/17	Complete Genome	Seoul National University College of Medicine	SAMN04390159	GCA_002148195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/195/GCA_002148195.1_ASM214819v1	-	Asan 36527
Dyella thiooxydans	445710	PRJNA309454	309454	Proteobacteria	Gammaproteobacteria	4.22717	68	chromosome:NZ_CP014841.1/CP014841.1	-	1	3793	3705	5/10/16	4/17/17	Complete Genome	Chungbuk National University	SAMN04433089	GCA_001641285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/285/GCA_001641285.1_ASM164128v1	-	ATSB10
Gordonia sp. QH-11	1136941	PRJNA287087	287087	Terrabacteria group	Actinobacteria	4.42873	68	chromosome:NZ_CP011853.1/CP011853.1	-	1	4158	4001	10/2/15	4/11/17	Complete Genome	Chinese Academy of Sciences	SAMN03776117	GCA_001305675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/305/675/GCA_001305675.1_ASM130567v1	-	QH-11
Microbacterium sp. CGR1	1696072	PRJNA291433	291433	Terrabacteria group	Actinobacteria	3.63486	68	chromosome:NZ_CP012299.1/CP012299.1	-	1	3490	3400	8/12/15	4/11/17	Complete Genome	Instituto de Nutricion y Tecnologia de los Alimentos - Universidad de Chile	SAMN03944033	GCA_001266755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/755/GCA_001266755.1_ASM126675v1	-	CGR1
Achromobacter xylosoxidans C54	562971	PRJNA260837	260837	Proteobacteria	Betaproteobacteria	6.13106	68	chromosome:NZ_CP009448.1/CP009448.1	-	1	5595	5405	9/26/14	4/2/17	Complete Genome	BEI Resources/American Type	SAMN03067439	GCA_000758265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/265/GCA_000758265.1_ASM75826v1	-	C54
Nocardia brasiliensis ATCC 700358	1133849	PRJNA81085	81085	Terrabacteria group	Actinobacteria	9.43635	68	chromosome:NC_018681.1/CP003876.1	-	1	8496	8320	9/28/12	5/19/17	Complete Genome	"Servicio de Dermatología, Hospital Universitario, U.A.N.L.,  Monterrey, N.L., México"	SAMN02603853	GCA_000250675.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/675/GCA_000250675.3_ASM25067v3	22535940	HUJEG-1
Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24	384035	PRJNA16739	16739	Proteobacteria	Alphaproteobacteria	1.14592	26.4	-	AAQP01	53	-	-	5/22/06	12/5/13	Scaffold	J. Craig Venter Institute	SAMN02436133	GCA_000153585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/585/GCA_000153585.1_ASM15358v1	-	-
Mycobacterium indicus pranii MTCC 9506	1232724	PRJNA33469	33469	Terrabacteria group	Actinobacteria	5.58901	68	chromosome:NC_018612.1/CP002275.1	-	1	5265	5121	9/18/12	5/19/17	Complete Genome	MIP genome sequencing consortium	SAMN02603610	GCA_000298095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/095/GCA_000298095.1_ASM29809v1	"1,791,234,722,965,120"	MTCC 9506
Candidatus Endoriftia persephone str. Hot96_1+Hot96_2	394104	PRJNA16744	16744	Proteobacteria	Gammaproteobacteria	3.20325	57.9	-	AASF01	2170	-	-	1/12/07	1/8/14	Contig	SymBio Corporation	SAMN02471028	GCA_000168735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/735/GCA_000168735.1_ASM16873v1	"1,721,852,818,237,300"	Hot96_1+Hot96_2
Halorhodospira halophila SL1	349124	PRJNA15767	15767	Proteobacteria	Gammaproteobacteria	2.67845	68	chromosome:NC_008789.1/CP000544.1	-	1	2490	2402	1/10/07	4/6/17	Complete Genome	DOE Joint Genome Institute	SAMN00623046	GCA_000015585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/585/GCA_000015585.1_ASM1558v1	23991253	SL1
Burkholderia pseudomallei 1710b	320372	PRJNA13954	13954	Proteobacteria	Betaproteobacteria	7.30805	67.9918	chromosome I:NC_007434.1/CP000124.1; chromosome II:NC_007435.1/CP000125.1	-	2	7515	7001	9/30/05	5/18/17	Complete Genome	TIGR	SAMN02604036	GCA_000012785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/785/GCA_000012785.1_ASM1278v1	-	1710b
Burkholderia pseudomallei NCTC 13179	1241583	PRJNA177186	177186	Proteobacteria	Betaproteobacteria	7.33716	67.991	chromosome I:CP003976.1; chromosome II:CP003977.1	-	2	6159	6085	11/1/13	6/23/15	Complete Genome	Los Alamos National Laboratory	SAMN02603566	GCA_000494855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/855/GCA_000494855.1_ASM49485v1	-	NCTC 13179
Alicycliphilus denitrificans BC	596153	PRJNA41663	41663	Proteobacteria	Betaproteobacteria	4.83571	67.9887	chromosome:NC_014910.1/CP002449.1; plasmid pALIDE01:NC_014908.1/CP002450.1; plasmid pALIDE02:NC_014911.1/CP002451.1	-	3	4662	4496	1/7/11	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00015356	GCA_000179015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/015/GCA_000179015.2_ASM17901v2	21742888	BC
Burkholderia pseudomallei	28450	PRJNA244409	244409	Proteobacteria	Betaproteobacteria	7.02795	67.9856	chromosome 1:NZ_CP008780.1/CP008780.1; chromosome 2:NZ_CP008779.1/CP008779.1	-	2	7296	6752	9/18/14	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN02866334	GCA_000756165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/165/GCA_000756165.1_ASM75616v1	25414490	MSHR1655
Burkholderia pseudomallei K42	1439852	PRJNA231207	231207	Proteobacteria	Betaproteobacteria	7.29646	67.9824	chromosome 1:NZ_CP009162.1/CP009162.1; chromosome 2:NZ_CP009163.1/CP009163.1	-	2	7508	6911	10/31/14	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN02951646	GCA_000770515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/515/GCA_000770515.1_ASM77051v1	25676747	K42
Burkholderia pseudomallei	28450	PRJNA352974	352974	Proteobacteria	Betaproteobacteria	7.33038	67.9783	chromosome 1:NZ_CP018404.1/CP018404.1; chromosome 2:NZ_CP018405.1/CP018405.1	-	2	7552	6988	4/26/17	5/1/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06007572	GCA_002111005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/005/GCA_002111005.1_ASM211100v1	-	2013746878
Burkholderia pseudomallei	28450	PRJNA352974	352974	Proteobacteria	Betaproteobacteria	7.31969	67.9783	chromosome 1:NZ_CP018410.1/CP018410.1; chromosome 2:NZ_CP018411.1/CP018411.1	-	2	7548	6880	4/26/17	5/1/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06007576	GCA_002111045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/045/GCA_002111045.1_ASM211104v1	-	3000015237
Burkholderia pseudomallei	28450	PRJNA352974	352974	Proteobacteria	Betaproteobacteria	7.33029	67.9783	chromosome 1:NZ_CP018402.1/CP018402.1; chromosome 2:NZ_CP018403.1/CP018403.1	-	2	7563	6924	4/26/17	5/1/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06007571	GCA_002111245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/245/GCA_002111245.1_ASM211124v1	-	2013746877
Burkholderia pseudomallei	28450	PRJNA321146	321146	Proteobacteria	Betaproteobacteria	7.31808	67.978	chromosome 1:NZ_CP016638.1/CP016638.1; chromosome 2:NZ_CP016639.1/CP016639.1	-	2	7531	6899	7/28/16	4/10/17	Complete Genome	University of Malaya	SAMN04966266	GCA_001695715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/715/GCA_001695715.1_ASM169571v1	-	M1
Chlorobium ferrooxidans DSM 13031	377431	PRJNA16644	16644	FCB group	Bacteroidetes/Chlorobi group	2.53896	50.1	-	AASE01	47	2383	2220	7/13/06	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441792	GCA_000168715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/715/GCA_000168715.1_ASM16871v1	-	DSM 13031
Burkholderia pseudomallei	28450	PRJNA321146	321146	Proteobacteria	Betaproteobacteria	7.31364	67.978	chromosome 1:NZ_CP016636.1/CP016636.1; chromosome 2:NZ_CP016637.1/CP016637.1	-	2	7509	6796	7/28/16	8/8/17	Complete Genome	University of Malaya	SAMN04966273	GCA_001695735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/735/GCA_001695735.1_ASM169573v1	-	MS
Burkholderia pseudomallei MSHR491	1249473	PRJNA238260	238260	Proteobacteria	Betaproteobacteria	7.35638	67.9777	chromosome I:NZ_CP009485.1/CP009485.1; chromosome II:NZ_CP009484.1/CP009484.1	-	2	7601	7020	3/20/15	3/26/17	Complete Genome	Los Alamos National Laboratory	SAMN02768252	GCA_000959205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/205/GCA_000959205.1_ASM95920v1	25931592	MSHR491
Leptolyngbya valderiana BDU 20041	322866	PRJNA312862	312862	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.99135	59.8	-	LSYZ01	420	5922	5553	5/5/16	4/12/17	Contig	Bharathidasan University	SAMN04508134	GCA_001637395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/395/GCA_001637395.1_ASM163739v1	-	BDU 20041
Burkholderia gladioli pv. gladioli	32009	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	8.28717	67.969	chromosome 1:CP023522.1; chromosome 2:CP023523.1; plasmid unnamed:CP023524.1	-	3	7271	6978	9/28/17	9/28/17	Complete Genome	US Food and Drug Administration 	SAMN07312433	GCA_002393425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/425/GCA_002393425.1_ASM239342v1	-	FDAARGOS_389
Moraxella bovis	476	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.75471	44	-	MUXV01	108	2738	2572	3/3/17	3/6/17	Scaffold	TAILORED-Treatment project	SAMN06308688	GCA_002014975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/975/GCA_002014975.1_ASM201497v1	-	CCUG 2133
Cupriavidus sp. USMAA2-4	876364	PRJNA348156	348156	Proteobacteria	Betaproteobacteria	8.69823	67.9525	chromosome 1:NZ_CP017748.1/CP017748.1; chromosome 2:NZ_CP017749.1/CP017749.1; plasmid unnamed1:NZ_CP017750.1/CP017750.1	-	3	7885	7567	10/26/16	4/17/17	Complete Genome	Universiti Sains Malaysia	SAMN05904705	GCA_001854305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/305/GCA_001854305.1_ASM185430v1	-	USMAA2-4
Mycobacterium yongonense 05-1390	1138871	PRJNA82265	82265	Terrabacteria group	Actinobacteria	5.66209	67.9502	chromosome:NC_021715.1/CP003347.1; plasmid pMyong1:NC_020275.1/JQ657805.1; plasmid pMyong2:NC_020276.1/JQ657806.1	-	3	5357	5158	7/8/13	9/4/17	Complete Genome	"Department of Microbiology and Immunology, Seoul National University"	SAMN02603187	GCA_000418535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/535/GCA_000418535.2_ASM41853v2	23929490	05-1390
Burkholderia pseudomallei PB08298010	1249658	PRJNA238269	238269	Proteobacteria	Betaproteobacteria	7.37555	67.946	chromosome I:NZ_CP009551.1/CP009551.1; chromosome II:NZ_CP009550.1/CP009550.1	-	2	7528	6973	3/20/15	3/26/17	Complete Genome	Los Alamos National Laboratory	SAMN03023795	GCA_000959345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/345/GCA_000959345.1_ASM95934v1	25931592	PB08298010
Burkholderia pseudomallei NCTC 13178	1249468	PRJNA178668	178668	Proteobacteria	Betaproteobacteria	7.39136	67.9365	chromosome I:NZ_CP004001.1/CP004001.1; chromosome II:NZ_CP004002.1/CP004002.1	-	2	7642	7067	12/26/13	3/24/17	Complete Genome	Los Alamos National Laboratory	SAMN02641521	GCA_000511895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/895/GCA_000511895.1_ASM51189v1	-	NCTC 13178
Burkholderia glumae BGR1	626418	PRJNA33901	33901	Proteobacteria	Betaproteobacteria	7.28464	67.9346	chromosome 1:NC_012724.2/CP001503.2; chromosome 2:NC_012721.2/CP001504.2; plasmid bglu_1p:NC_012723.1/CP001505.1; plasmid bglu_2p:NC_012718.1/CP001506.1; plasmid bglu_3p:NC_012720.2/CP001507.2; plasmid bglu_4p:NC_012725.2/CP001508.2	-	6	6485	6151	5/22/09	5/18/17	Complete Genome	Crop Functional Genomics Center	SAMN02603166	GCA_000022645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/645/GCA_000022645.2_ASM2264v1	19329631	BGR1
Burkholderia pseudomallei	28450	PRJNA352974	352974	Proteobacteria	Betaproteobacteria	7.4284	67.9335	chromosome 1:NZ_CP018416.1/CP018416.1; chromosome 2:NZ_CP018417.1/CP018417.1	-	2	7665	7097	4/26/17	5/1/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06007579	GCA_002111305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/305/GCA_002111305.1_ASM211130v1	-	3000465972
Rickettsiella grylli	59196	PRJNA16722	16722	Proteobacteria	Gammaproteobacteria	1.58124	37.9	-	AAQJ02	2	1491	1408	5/2/06	4/7/17	Contig	TIGR	SAMN02435840	GCA_000168295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/295/GCA_000168295.1_ASM16829v1	-	-
Chelatococcus daeguensis	444444	PRJNA353569	353569	Proteobacteria	Alphaproteobacteria	4.09517	67.9261	chromosome:NZ_CP018095.1/CP018095.1; plasmid pTAD1:NZ_CP018096.1/CP018096.1	-	2	3848	3724	11/29/16	4/16/17	Complete Genome	Fujian Agriculture and Forestry University	SAMN06016468	GCA_001887265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/265/GCA_001887265.1_ASM188726v1	-	TAD1
Burkholderia pseudomallei	28450	PRJNA352974	352974	Proteobacteria	Betaproteobacteria	7.34383	67.9224	chromosome 1:NZ_CP018406.1/CP018406.1; chromosome 2:NZ_CP018407.1/CP018407.1	-	2	7561	6950	4/26/17	5/1/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06007573	GCA_002111025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/025/GCA_002111025.1_ASM211102v1	-	2013833055
Burkholderia pseudomallei	28450	PRJNA352974	352974	Proteobacteria	Betaproteobacteria	7.3436	67.9224	chromosome 1:NZ_CP018408.1/CP018408.1; chromosome 2:NZ_CP018409.1/CP018409.1	-	2	7565	6941	4/26/17	5/1/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06007574	GCA_002111265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/265/GCA_002111265.1_ASM211126v1	-	2013833057
Burkholderia pseudomallei	28450	PRJNA352974	352974	Proteobacteria	Betaproteobacteria	7.34497	67.921	chromosome 1:NZ_CP018389.1/CP018389.1; chromosome 2:NZ_CP018390.1/CP018390.1	-	2	7549	6949	4/26/17	5/1/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06007565	GCA_002111165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/165/GCA_002111165.1_ASM211116v1	-	2011756189
Burkholderia pseudomallei	28450	PRJNA352974	352974	Proteobacteria	Betaproteobacteria	7.38214	67.9208	chromosome 1:NZ_CP018373.1/CP018373.1; chromosome 2:NZ_CP018374.1/CP018374.1	-	2	7582	7018	4/26/17	5/1/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06007557	GCA_002111085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/085/GCA_002111085.1_ASM211108v1	-	2002721184
Burkholderia pseudomallei 7894	441156	PRJNA238559	238559	Proteobacteria	Betaproteobacteria	7.38191	67.9208	chromosome I:NZ_CP009535.1/CP009535.1; chromosome II:NZ_CP009536.1/CP009536.1	-	2	7586	7019	3/20/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03075630	GCA_000959265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/265/GCA_000959265.1_ASM95926v1	25931592	7894
Burkholderia pseudomallei	28450	PRJNA352974	352974	Proteobacteria	Betaproteobacteria	7.38379	67.92	chromosome 1:NZ_CP018382.1/CP018382.1; chromosome 2:NZ_CP018383.1/CP018383.1	-	2	7608	6990	4/26/17	5/1/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06007562	GCA_002111365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/365/GCA_002111365.1_ASM211136v1	-	2008724758
Alicycliphilus denitrificans K601	596154	PRJNA50751	50751	Proteobacteria	Betaproteobacteria	5.07075	67.9137	chromosome:NC_015422.1/CP002657.1; plasmid pALIDE201:NC_015423.1/CP002658.1	-	2	4867	4682	4/19/11	5/18/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713606	GCA_000204645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/645/GCA_000204645.1_ASM20464v1	21742888	K601
Burkholderia pseudomallei	28450	PRJNA352974	352974	Proteobacteria	Betaproteobacteria	7.44767	67.9073	chromosome 1:NZ_CP018412.1/CP018412.1; chromosome 2:NZ_CP018413.1/CP018413.1	-	2	7698	7080	4/26/17	5/1/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06007577	GCA_002111385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/385/GCA_002111385.1_ASM211138v1	-	3000015486
Burkholderia pseudomallei	28450	PRJNA352974	352974	Proteobacteria	Betaproteobacteria	7.43652	67.9055	chromosome 1:CP018414.1; chromosome 2:CP018415.1	-	2	7472	6781	4/26/17	4/26/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06007578	GCA_002111285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/285/GCA_002111285.1_ASM211128v1	-	3000047530
Sphingomonas wittichii RW1	392499	PRJNA17343	17343	Proteobacteria	Alphaproteobacteria	5.91525	67.9033	chromosome:NC_009511.1/CP000699.1; plasmid pSWIT01:NC_009507.1/CP000700.1; plasmid pSWIT02:NC_009508.1/CP000701.1	-	3	5477	5364	5/31/07	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598383	GCA_000016765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/765/GCA_000016765.1_ASM1676v1	20833805	RW1
Burkholderia pseudomallei MSHR2543	1249472	PRJNA238257	238257	Proteobacteria	Betaproteobacteria	7.44657	67.9014	chromosome I:NZ_CP009478.1/CP009478.1; chromosome II:NZ_CP009477.1/CP009477.1	-	2	7724	7160	3/20/15	3/26/17	Complete Genome	Los Alamos National Laboratory	SAMN03074056	GCA_000959225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/225/GCA_000959225.1_ASM95922v1	25931592	MSHR2543
Rhodococcus pyridinivorans	103816	PRJNA398330	398330	Terrabacteria group	Actinobacteria	5.30389	67.9	chromosome:NZ_CP022915.1/CP022915.1	-	1	4966	4644	8/24/17	8/27/17	Complete Genome	Dalian university of technology	SAMN07510605	GCA_002269365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/365/GCA_002269365.1_ASM226936v1	-	GF3
Comamonas serinivorans	1082851	PRJNA387990	387990	Proteobacteria	Betaproteobacteria	4.52291	67.9	chromosome:NZ_CP021455.1/CP021455.1	-	1	3870	3708	5/30/17	6/1/17	Complete Genome	Jiangsu University	SAMN07166496	GCA_002158865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/158/865/GCA_002158865.1_ASM215886v1	-	DSM 26136
Tessaracoccus flavus	1610493	PRJNA362686	362686	Terrabacteria group	Actinobacteria	3.22289	67.9	chromosome:NZ_CP019605.1/CP019605.1	-	1	2950	2785	2/14/17	4/17/17	Complete Genome	Kyung Hee University	SAMN06245886	GCA_001997295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/295/GCA_001997295.1_ASM199729v1	26869509	RP1T
Halomonas aestuarii	1897729	PRJNA353720	353720	Proteobacteria	Gammaproteobacteria	3.54389	67.9	chromosome:NZ_CP018139.1/CP018139.1	-	1	3298	3180	11/28/16	5/24/17	Complete Genome	Jeju National University	SAMN06019500	GCA_001886615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/615/GCA_001886615.1_ASM188661v1	-	Hb3
Achromobacter denitrificans	32002	PRJNA281531	281531	Proteobacteria	Betaproteobacteria	6.22621	67.9	chromosome:NZ_CP013923.1/CP013923.1	-	1	5638	5488	1/14/16	4/11/17	Complete Genome	USDA-ARS-USMARC	SAMN04158498	GCA_001514355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/355/GCA_001514355.1_ASM151435v1	-	USDA-ARS-USMARC-56712
Blastochloris viridis	1079	PRJEB11490	301123	Proteobacteria	Alphaproteobacteria	3.72322	67.9	chromosome I:NZ_LN907867.1/LN907867.1	-	1	3260	3149	11/19/15	4/11/17	Complete Genome	UNIVERSITY OF LIVERPOOL	SAMEA3632277	GCA_001459775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/459/775/GCA_001459775.1_Blastochloris_viridis_genome	-	-
Blastochloris viridis	1079	PRJNA297399	297399	Proteobacteria	Alphaproteobacteria	3.72484	67.9	chromosome:NZ_CP012946.1/CP012946.1	-	1	3265	3157	10/22/15	4/11/17	Complete Genome	Institute for Basic Science	SAMN04123293	GCA_001402875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/875/GCA_001402875.1_ASM140287v1	-	ATCC 19567
Blastochloris viridis	1079	PRJDB3853	290058	Proteobacteria	Alphaproteobacteria	3.72663	67.9	chromosome:NZ_AP014854.2/AP014854.2	-	1	3260	3149	7/15/15	4/12/17	Complete Genome	Tokyo Institute of Technology	SAMD00029041	GCA_001548155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/155/GCA_001548155.2_BV133_assembly_1.0	26337894	DSM 133
Thermosinus carboxydivorans Nor1	401526	PRJNA17587	17587	Terrabacteria group	Firmicutes	2.88977	51.5	-	AAWL01	49	2926	2665	1/5/07	4/17/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN00623067	GCA_000169155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/155/GCA_000169155.1_ASM16915v1	-	Nor1
Marichromatium purpuratum 984	765910	PRJNA62513	62513	Proteobacteria	Gammaproteobacteria	3.77911	67.9	chromosome:NZ_CP007031.1/CP007031.1	-	1	3340	3215	1/3/14	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02256540	GCA_000224005.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/005/GCA_000224005.3_ASM22400v3	-	984
Mycobacterium sp. MOTT36Y	1168287	PRJNA156947	156947	Terrabacteria group	Actinobacteria	5.61363	67.9	chromosome:NC_017904.1/CP003491.1	-	1	5286	5121	5/9/12	5/18/17	Complete Genome	Seoul National University College of Medicine	SAMN02603851	GCA_000262165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/165/GCA_000262165.1_ASM26216v1	22815454	MOTT36Y
Rhodobacterales bacterium HTCC2255	367336	PRJNA17677	17677	Proteobacteria	Alphaproteobacteria	2.2968	36.9	-	AATR01	2	2240	2180	9/15/06	4/17/17	Scaffold	J. Craig Venter Institute	SAMN02436106	GCA_000153745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/745/GCA_000153745.1_ASM15374v1	-	HTCC2255
Starkeya novella DSM 506	639283	PRJNA37659	37659	Proteobacteria	Alphaproteobacteria	4.76502	67.9	chromosome:NC_014217.1/CP002026.1	-	1	4519	4401	5/27/10	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598514	GCA_000092925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/925/GCA_000092925.1_ASM9292v1	23450099	DSM 506
Azoarcus sp. BH72	62928	PRJNA13217	13217	Proteobacteria	Betaproteobacteria	4.37604	67.9	chromosome:NC_008702.1/AM406670.1	-	1	4025	3928	12/19/06	5/18/17	Complete Genome	Bielefeld Univ	SAMEA3138261	GCA_000061505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/061/505/GCA_000061505.1_ASM6150v1	17057704	BH72
Sphingomonas taxi	1549858	PRJNA261987	261987	Proteobacteria	Alphaproteobacteria	4.0619	67.8923	chromosome:NZ_CP009571.1/CP009571.1; plasmid STP1:NZ_CP009572.1/CP009572.1; plasmid STP2:NZ_CP009573.1/CP009573.1	-	3	3739	3620	10/8/14	4/9/17	Complete Genome	Wuhan University	SAMN03078686	GCA_000764535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/535/GCA_000764535.1_ASM76453v1	-	ATCC 55669
Burkholderia pseudomallei	28450	PRJNA256982	256982	Proteobacteria	Betaproteobacteria	7.44216	67.891	chromosome 1:NZ_CP009209.1/CP009209.1; chromosome 2:NZ_CP009210.1/CP009210.1	-	2	7672	7068	9/18/14	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN02945025	GCA_000755765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/765/GCA_000755765.1_ASM75576v1	25414490	BDP
Burkholderia pseudomallei MSHR520	1249659	PRJNA178699	178699	Proteobacteria	Betaproteobacteria	7.45051	67.891	chromosome I:NZ_CP004368.1/CP004368.1; chromosome II:NZ_CP004369.1/CP004369.1	-	2	7685	7044	3/3/14	4/10/17	Complete Genome	Los Alamos National Laboratory	SAMN03081457	GCA_000583835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/835/GCA_000583835.1_ASM58383v1	25931592	MSHR520
Burkholderia pseudomallei	28450	PRJNA339871	339871	Proteobacteria	Betaproteobacteria	7.43706	67.8909	chromosome 1:NZ_CP017050.1/CP017050.1; chromosome 2:NZ_CP017051.1/CP017051.1	-	2	7647	7059	1/30/17	7/24/17	Complete Genome	Menzies School of Health Research	SAMN04226311	GCA_001975125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/125/GCA_001975125.1_ASM197512v1	28385830	MSHR4083
Burkholderia pseudomallei	28450	PRJNA339871	339871	Proteobacteria	Betaproteobacteria	7.43698	67.8909	chromosome 1:NZ_CP017052.1/CP017052.1; chromosome 2:NZ_CP017053.1/CP017053.1	-	2	7650	7058	1/30/17	7/24/17	Complete Genome	Menzies School of Health Research	SAMN04226303	GCA_001975145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/145/GCA_001975145.1_ASM197514v1	28385830	MSHR3763
Burkholderia pseudomallei MSHR305	1335307	PRJNA203336	203336	Proteobacteria	Betaproteobacteria	7.42807	67.8908	chromosome 1:NC_021877.1/CP006469.1; chromosome 2:NC_021884.1/CP006470.1	-	2	7664	7082	7/24/13	3/24/17	Complete Genome	Los Alamos National Laboratory	SAMN02603568	GCA_000439695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/695/GCA_000439695.1_ASM43969v1	23969058	MSHR305
Mycobacterium intracellulare	1767	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.63864	67.8886	chromosome:NZ_CP023149.1/CP023149.1; plasmid pFLAC0181:NZ_CP023150.1/CP023150.1	-	2	5321	5195	9/5/17	9/7/17	Complete Genome	University of Michigan Medical School	SAMN07528789	GCA_002285675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/675/GCA_002285675.1_ASM228567v1	-	FLAC0181
Rhodococcus sp. p52	935199	PRJNA255270	255270	Terrabacteria group	Actinobacteria	5.41328	67.8454	chromosome:NZ_CP016819.1/CP016819.1; plasmid pDF01:NZ_CP016821.1/CP016821.1; plasmid pDF02:NZ_CP016820.1/CP016820.1; plasmid pDF03:NZ_CP016822.1/CP016822.1	-	4	5076	4753	8/16/16	4/17/17	Complete Genome	Shandong University	SAMN02911797	GCA_000763325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/325/GCA_000763325.2_ASM76332v2	-	p52
Mycobacterium chimaera	222805	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.75154	67.8403	chromosome:NZ_CP023151.1/CP023151.1; plasmid pFLAC0070_1:NZ_CP023152.1/CP023152.1; plasmid pFLAC0070_2:NZ_CP023153.1/CP023153.1	-	3	5413	5238	9/5/17	9/9/17	Complete Genome	University of Michigan Medical School	SAMN07528780	GCA_002287605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/605/GCA_002287605.1_ASM228760v1	-	FLAC0070
Burkholderia pseudomallei	28450	PRJNA352974	352974	Proteobacteria	Betaproteobacteria	7.48239	67.8197	chromosome 1:NZ_CP018380.1/CP018380.1; chromosome 2:NZ_CP018381.1/CP018381.1	-	2	7742	7126	4/26/17	5/1/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06007561	GCA_002110945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/945/GCA_002110945.1_ASM211094v1	-	2008724734
Mycobacterium sp. djl-10	1879023	PRJNA329584	329584	Terrabacteria group	Actinobacteria	6.57932	67.807	chromosome:NZ_CP016640.1/CP016640.1; plasmid djl-10_1:NZ_CP016641.1/CP016641.1; plasmid djl-10_2:NZ_CP016642.1/CP016642.1; plasmid djl-10_3:NZ_CP016643.1/CP016643.1	-	4	6318	6164	7/28/16	4/13/17	Complete Genome	Huaiyin Normal University	SAMN05415090	GCA_001695755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/755/GCA_001695755.1_ASM169575v1	-	djl-10
Flavobacteria bacterium BAL38	391598	PRJNA18953	18953	FCB group	Bacteroidetes/Chlorobi group	2.80699	31.4	-	AAXX01	14	2585	2478	3/6/07	4/17/17	Contig	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436123	GCA_000169355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/355/GCA_000169355.1_ASM16935v1	-	BAL38
Sagittula stellata E-37	388399	PRJNA18971	18971	Proteobacteria	Alphaproteobacteria	5.26289	65	-	AAYA01	39	4973	4816	3/7/07	5/19/17	Contig	Gordon and Betty Moore Foundation Microbial Genome Sequencing Project	SAMN02436093	GCA_000169415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/415/GCA_000169415.1_ASM16941v1	-	E-37
Rhodobacteraceae bacterium HTCC2150	388401	PRJNA18973	18973	Proteobacteria	Alphaproteobacteria	3.5829	49.1	-	AAXZ01	25	3524	3381	3/7/07	4/17/17	Contig	Gordon and Betty Moore Foundation Microbial Genome Sequencing Project	SAMN02436158	GCA_000169395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/395/GCA_000169395.1_ASM16939v1	20889754	HTCC2150
Burkholderia pseudomallei	28450	PRJNA352974	352974	Proteobacteria	Betaproteobacteria	7.49832	67.8056	chromosome 1:NZ_CP018391.1/CP018391.1; chromosome 2:NZ_CP018392.1/CP018392.1	-	2	7677	7028	4/26/17	5/1/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06007566	GCA_002110965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/965/GCA_002110965.1_ASM211096v1	-	2011756295
Methylophilales bacterium HTCC2181	383631	PRJNA18317	18317	Proteobacteria	Betaproteobacteria	1.30443	37.9	-	AAUX01	3	1367	1314	11/28/06	4/17/17	Contig	J. Craig Venter Institute	SAMN02436128	GCA_000168995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/995/GCA_000168995.1_ASM16899v1	-	HTCC2181
Alteromonadales bacterium TW-7	156578	PRJNA18465	18465	Proteobacteria	Gammaproteobacteria	4.10495	39.7	-	AAVS01	76	3766	3563	12/15/06	4/17/17	Contig	Gordon and Betty Moore Foundation Microbial Genome Sequencing Project	SAMN02436129	GCA_000169055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/055/GCA_000169055.1_ASM16905v1	-	TW-7
marine gamma proteobacterium HTCC2080	247639	PRJNA18487	18487	Proteobacteria	Gammaproteobacteria	3.57608	51.8	-	AAVV01	25	3170	3083	12/15/06	4/17/17	Contig	Gordon and Betty Moore Foundation Microbial Genome Sequencing Project	SAMN02436101	GCA_000169115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/115/GCA_000169115.1_ASM16911v1	20472793	HTCC2080
Rhodococcus pyridinivorans SB3094	1435356	PRJNA231235	231235	Terrabacteria group	Actinobacteria	5.59051	67.8052	chromosome:NC_023150.1/CP006996.1; plasmid unnamed:NC_023144.1/CP006997.1; plasmid unnamed2:NC_023145.1/CP006998.1	-	3	5165	4893	12/20/13	4/2/17	Complete Genome	Aalborg University	SAMN02641478	GCA_000511305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/305/GCA_000511305.1_ASM51130v1	24874690	SB3094
Mycobacterium gilvum Spyr1	278137	PRJNA28521	28521	Terrabacteria group	Actinobacteria	5.78329	67.8018	chromosome:NC_014814.1/CP002385.1; plasmid pMSPYR101:NC_014811.1/CP002386.1; plasmid pMSPYR102:NC_014812.1/CP002387.1	-	3	5530	5322	12/21/10	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713568	GCA_000184435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/184/435/GCA_000184435.1_ASM18443v1	22180818	Spyr1
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.25741	67.8	chromosome:NZ_CP017404.1/CP017404.1	-	1	4115	3752	10/24/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05770315	GCA_001831435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/435/GCA_001831435.1_ASM183143v1	28007855	J447
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.3864	67.8	chromosome:NZ_CP017405.1/CP017405.1	-	1	4239	3866	10/24/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05770316	GCA_001831455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/455/GCA_001831455.1_ASM183145v1	28007855	J448
Gordonia terrae	2055	PRJNA330541	330541	Terrabacteria group	Actinobacteria	5.7015	67.8	chromosome:NZ_CP016594.1/CP016594.1	-	1	5093	4973	8/2/16	4/13/17	Complete Genome	University of Pittsburgh	SAMN05417667	GCA_001698225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/225/GCA_001698225.1_ASM169822v1	-	3612
Immundisolibacter cernigliae	1810504	PRJNA314077	314077	Proteobacteria	Gammaproteobacteria	3.24354	67.8	chromosome:NZ_CP014671.1/CP014671.1	-	1	3087	2963	8/2/16	4/13/17	Complete Genome	University of North Carolina - Chapel Hill	SAMN04528780	GCA_001697225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/225/GCA_001697225.1_ASM169722v1	"2,779,525,427,926,810"	TR3.2
Azoarcus olearius	418699	PRJNA280719	280719	Proteobacteria	Betaproteobacteria	4.45175	67.8	chromosome:NZ_CP016210.1/CP016210.1	-	1	4094	4005	7/8/16	4/17/17	Complete Genome	UFPR	SAMN03468107	GCA_001682385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/385/GCA_001682385.1_ASM168238v1	-	DQS4
Achromobacter xylosoxidans	85698	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	6.26308	67.8	chromosome:CP014028.1	-	1	5706	3545	2/11/16	2/11/16	Complete Genome	US Food and Drug Administration 	SAMN03996294	GCA_001559195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/195/GCA_001559195.1_ASM155919v1	-	FDAARGOS_150
Sulfurihydrogenibium yellowstonense SS-5	432331	PRJNA19071	19071	Aquificae	Aquificae	1.53447	32.8	-	ABZS01	228	1600	1313	5/18/09	4/17/17	Contig	TIGR	SAMN02436268	GCA_000173615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/615/GCA_000173615.1_ASM17361v1	-	SS-5
candidate division TM7 single-cell isolate TM7a	447454	PRJNA19081	19081	unclassified Bacteria	Bacteria candidate phyla	2.86436	34.3	-	ABBV01	8553	-	-	6/8/07	7/28/15	Contig	US DOE Joint Genome Institute	SAMN02441791	GCA_000170635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/635/GCA_000170635.1_ASM17063v1	17620602	-
candidate division TM7 single-cell isolate TM7b	447455	PRJNA19083	19083	unclassified Bacteria	Bacteria candidate phyla	0.112753	37	-	ABBW01	85	-	-	6/8/07	7/28/15	Contig	US DOE Joint Genome Institute	SAMN02441781	GCA_000170655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/655/GCA_000170655.1_ASM17065v1	17620602	-
candidate division TM7 single-cell isolate TM7c	447456	PRJNA19085	19085	unclassified Bacteria	Bacteria candidate phyla	0.474179	39.1	-	ABBX01	129	-	-	6/8/07	7/28/15	Contig	US DOE Joint Genome Institute	SAMN02441782	GCA_000170675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/675/GCA_000170675.1_ASM17067v1	17620602	-
Nocardia nova SH22a	1415166	PRJNA225667	225667	Terrabacteria group	Actinobacteria	8.34853	67.8	chromosome:NZ_CP006850.1/CP006850.1	-	1	7565	7379	1/27/14	4/9/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02641505	GCA_000523235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/235/GCA_000523235.1_ASM52323v1	24747905	SH22a
Mycobacterium vanbaalenii PYR-1	350058	PRJNA15761	15761	Terrabacteria group	Actinobacteria	6.49186	67.8	chromosome:NC_008726.1/CP000511.1	-	1	6201	5999	12/27/06	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02598347	GCA_000015305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/305/GCA_000015305.1_ASM1530v1	-	PYR-1
Corynebacterium marinum DSM 44953	1224162	PRJNA172963	172963	Terrabacteria group	Actinobacteria	2.72922	67.7994	chromosome:NZ_CP007790.1/CP007790.1; plasmid pCmarinum1:NZ_CP007792.1/CP007792.1; plasmid pCmarinum2:NZ_CP007791.1/CP007791.1	-	3	2583	2477	2/10/15	4/17/17	Complete Genome	"CeBiTec, Bielefeld University"	SAMN02800399	GCA_000835165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/835/165/GCA_000835165.1_ASM83516v1	-	DSM 44953
Mycobacterium marseillense	701042	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.28564	67.787	chromosome:NZ_CP023147.1/CP023147.1; plasmid pFLAC0026:NZ_CP023148.1/CP023148.1	-	2	4956	4819	9/5/17	9/7/17	Complete Genome	University of Michigan Medical School	SAMN07528776	GCA_002285715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/715/GCA_002285715.1_ASM228571v1	-	FLAC0026
Burkholderia pseudomallei	28450	PRJNA352974	352974	Proteobacteria	Betaproteobacteria	7.54266	67.787	chromosome 1:NZ_CP018384.1/CP018384.1; chromosome 2:NZ_CP018386.1/CP018386.1; plasmid p1:NZ_CP018385.1/CP018385.1	-	3	7735	7110	4/26/17	5/1/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06007563	GCA_002111125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/125/GCA_002111125.1_ASM211112v1	-	2008724860
Bordetella parapertussis Bpp5	1208660	PRJEB143	177084	Proteobacteria	Betaproteobacteria	4.89957	67.7798	chromosome:NC_018828.1/HE965803.1; plasmid BPP5P1:NC_018830.1/HE965804.1	-	2	4574	4184	10/8/12	8/28/16	Complete Genome	WTSI	SAMEA2272448	GCA_000317935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/935/GCA_000317935.1_ASM31793v1	-	Bpp5
alpha proteobacterium BAL199	331869	PRJNA19281	19281	Proteobacteria	Alphaproteobacteria	6.1027	65	-	ABHC01	69	6033	5746	11/7/07	5/19/17	Contig	Gordon and Betty Moore Foundation Microbial Genome Sequencing Project	SAMN02436095	GCA_000171835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/835/GCA_000171835.1_ASM17183v1	-	BAL199
Mycobacterium chimaera	222805	PRJNA391747	391747	Terrabacteria group	Actinobacteria	5.93863	67.7763	chromosome:NZ_CP022223.1/CP022223.1; plasmid unnamed1:NZ_CP022224.1/CP022224.1; plasmid unnamed2:NZ_CP022225.1/CP022225.1	-	3	5557	5307	8/2/17	8/4/17	Complete Genome	National Jewish Health	SAMN07274465	GCA_002240155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/155/GCA_002240155.1_ASM224015v1	-	SJ42
Calothrix rhizosoleniae SC01	439482	PRJEB19506	376308	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.973	39.5	-	FYBH01	472	5098	4603	6/9/17	6/21/17	Contig	UC SANTA CRUZ	SAMEA94537168	GCA_900185595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/595/GCA_900185595.1_CalSC01_2013	-	-
Caminibacter mediatlanticus TB-2	391592	PRJNA19293	19293	Proteobacteria	delta/epsilon subdivisions	1.66362	27.1	-	ABCJ01	35	1811	1690	6/19/07	4/17/17	Contig	The Gordon and Betty Moore Foundation Microbial Genome Sequencing Project	SAMN02436122	GCA_000170735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/735/GCA_000170735.1_ASM17073v1	22180817	TB-2
Flavobacteriales bacterium ALC-1	391603	PRJNA19307	19307	FCB group	Bacteroidetes/Chlorobi group	3.82571	32.4	-	ABHI01	8	3415	3312	11/9/07	4/17/17	Contig	Moore Foundation	SAMN02436146	GCA_000171875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/875/GCA_000171875.1_ASM17187v1	-	ALC-1
gamma proteobacterium HTCC5015	391615	PRJNA19309	19309	Proteobacteria	Gammaproteobacteria	2.62561	54	-	ABSJ01	30	2471	2364	7/15/08	4/17/17	Scaffold	Moore Foundation	SAMN02436275	GCA_000155715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/715/GCA_000155715.1_ASM15571v1	20472792	HTCC5015
Hoeflea phototrophica DFL-43	411684	PRJNA19311	19311	Proteobacteria	Alphaproteobacteria	4.46847	59.8	chromosome:NZ_CM002917.1/CM002917.1	ABIA03	1	8515	8338	11/28/07	4/17/17	Chromosome	The Gordon and Betty Moore Foundation Microbial Genome Sequencing Project	SAMN02436119	GCA_000154705.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/705/GCA_000154705.2_ASM15470v2	-	DFL-43
Kordia algicida OT-1	391587	PRJNA19315	19315	FCB group	Bacteroidetes/Chlorobi group	5.03313	34.3	-	ABIB01	1	4362	4209	11/28/07	5/18/17	Scaffold	The Gordon and Betty Moore Foundation Microbial Genome Sequencing Project	SAMN02436147	GCA_000154725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/725/GCA_000154725.1_ASM15472v1	21622754	OT-1
Burkholderia thailandensis H0587	1249663	PRJNA178703	178703	Proteobacteria	Betaproteobacteria	6.76837	67.7476	chromosome 1:NZ_CP004089.1/CP004089.1; chromosome 2:NZ_CP004090.1/CP004090.1	-	2	6452	5890	2/10/14	4/10/17	Complete Genome	Los Alamos National Laboratory	SAMN03081448	GCA_000567905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/905/GCA_000567905.1_ASM56790v1	-	H0587
Marinobacter algicola DG893	443152	PRJNA19321	19321	Proteobacteria	Gammaproteobacteria	4.413	57	-	ABCP01	104	4094	3967	6/21/07	5/19/17	Contig	Moore Foundation	SAMN02436149	GCA_000170835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/835/GCA_000170835.1_ASM17083v1	-	DG893
Methylophaga thiooxydans DMS010	637616	PRJNA19323	19323	Proteobacteria	Gammaproteobacteria	3.04765	46.2	-	ABXT01	26	3173	3084	10/2/08	4/7/17	Scaffold	Moore Foundation	SAMN02436314	GCA_000156355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/355/GCA_000156355.1_ASM15635v1	21478352	DMS010
Coleofasciculus chthonoplastes PCC 7420	118168	PRJNA19325	19325	Terrabacteria group	Cyanobacteria/Melainabacteria group	8.67904	45.4	-	ABRS01	57	7094	6635	7/8/08	4/17/17	Scaffold	The Gordon and Betty Moore Foundation Microbial Genome Sequencing Project	SAMN02436227	GCA_000155555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/555/GCA_000155555.1_ASM15555v1	-	PCC 7420
Oceanibulbus indolifex HEL-45	391624	PRJNA19327	19327	Proteobacteria	Alphaproteobacteria	4.10552	59.5	-	ABID01	105	4061	3841	11/30/07	4/17/17	Contig	The Gordon and Betty Moore Foundation Microbial Genome Sequencing Project	SAMN02436097	GCA_000172095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/095/GCA_000172095.1_ASM17209v1	-	HEL-45
Plesiocystis pacifica SIR-1	391625	PRJNA19341	19341	Proteobacteria	delta/epsilon subdivisions	10.5876	70.7	-	ABCS01	237	8323	7912	6/26/07	5/19/17	Contig	The Gordon and Betty Moore Foundation Microbial Genome Sequencing project	SAMN02436152	GCA_000170895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/895/GCA_000170895.1_ASM17089v1	-	SIR-1
Rhodobacterales bacterium Y4I	439496	PRJNA19349	19349	Proteobacteria	Alphaproteobacteria	4.34424	64.4	-	ABXF01	5	4166	4001	9/23/08	6/19/17	Scaffold	Moore Foundation	SAMN02436180	GCA_000156135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/135/GCA_000156135.1_ASM15613v1	-	Y4I
Burkholderia thailandensis	57975	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.76793	67.7475	chromosome 1:NZ_CP013409.1/CP013409.1; chromosome 2:NZ_CP013410.1/CP013410.1	-	2	6452	5863	9/2/16	4/10/17	Complete Genome	Northern Arizona University	SAMN04196786	GCA_001718615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/615/GCA_001718615.1_ASM171861v1	-	2002721121
Labrenzia alexandrii DFL-11	244592	PRJNA19367	19367	Proteobacteria	Alphaproteobacteria	5.50483	56.4	-	ACCU01	6	5137	5022	12/17/08	5/18/17	Scaffold	Moore Foundation	SAMN02436266	GCA_000158095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/095/GCA_000158095.1_ASM15809v1	-	DFL-11
unidentified eubacterium SCB49	50743	PRJNA19389	19389	FCB group	Bacteroidetes/Chlorobi group	3.21402	34	-	ABCO01	25	2985	2948	6/21/07	8/11/14	Contig	Moore Foundation	SAMN02981237	GCA_000170815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/815/GCA_000170815.1_ASM17081v1	-	SCB49
Verrucomicrobiae bacterium DG1235	382464	PRJNA19391	19391	PVC group	Verrucomicrobia	5.77574	54.2	-	ABSI01	6	4624	4519	7/15/08	8/27/17	Scaffold	Moore Foundation	SAMN02436317	GCA_000155695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/695/GCA_000155695.1_ASM15569v1	-	DG1235
Mycobacterium gilvum PYR-GCK	350054	PRJNA15760	15760	Terrabacteria group	Actinobacteria	5.98283	67.7265	chromosome:NC_009338.1/CP000656.1; plasmid pMFLV01:NC_009339.1/CP000657.1; plasmid pMFLV02:NC_009340.1/CP000658.1; plasmid pMFLV03:NC_009341.1/CP000659.1	-	4	5736	5557	4/13/07	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598346	GCA_000016365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/365/GCA_000016365.1_ASM1636v1	23469141	PYR-GCK
Mycobacterium chimaera	222805	PRJNA314008	314008	Terrabacteria group	Actinobacteria	6.1336	67.7078	chromosome:NZ_CP015278.1/CP015278.1; plasmid unnamed 1:NZ_CP015279.1/CP015279.1; plasmid unnamed 2:NZ_CP015280.1/CP015280.1	-	3	5769	5549	7/14/17	7/17/17	Complete Genome	Leibniz Institute DSMZ	SAMN01174703	GCA_002219285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/219/285/GCA_002219285.1_ASM221928v1	-	DSM 44623
Vibrionales bacterium SWAT-3	391574	PRJNA19399	19399	Proteobacteria	Gammaproteobacteria	5.83571	44.5	-	AAZW01	154	5345	4816	4/26/07	5/19/17	Contig	Moore Foundation	SAMN02436103	GCA_000169995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/995/GCA_000169995.1_ASM16999v1	-	SWAT-3
candidate division TM7 genomosp. GTL1	443342	PRJNA19421	19421	unclassified Bacteria	Bacteria candidate phyla	0.679415	48.5	-	AAXS01	132	690	684	5/21/07	1/8/14	Contig	Diversa Corporation	SAMN02469743	GCA_000169295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/295/GCA_000169295.1_ASM16929v1	17369337	-
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.12784	67.7	chromosome:NZ_CP016956.1/CP016956.1	-	1	3986	3599	9/5/17	9/7/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05583817	GCA_002285955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/955/GCA_002285955.1_ASM228595v1	-	E945
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.12604	67.7	chromosome:NZ_CP016957.1/CP016957.1	-	1	3989	3601	9/5/17	9/7/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05583809	GCA_002285975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/975/GCA_002285975.1_ASM228597v1	-	B226
Bacillus coahuilensis m4-4	441769	PRJNA19551	19551	Terrabacteria group	Firmicutes	3.38135	38.1	-	ABFU01	138	3686	2925	3/20/08	4/7/17	Contig	"LANGEBIO Laboratorio Nacional de Genomica para la Biodiversidad (National Laboratory of Genomics for Biodiversity), Mexico"	SAMN02470227	GCA_000171615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/615/GCA_000171615.1_ASM17161v1	18408155	m4-4
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11059	67.7	chromosome:NZ_CP016958.1/CP016958.1	-	1	3978	3589	9/5/17	9/7/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05583815	GCA_002285995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/995/GCA_002285995.1_ASM228599v1	-	E537
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10744	67.7	chromosome:NZ_CP016959.1/CP016959.1	-	1	3970	3585	9/5/17	9/7/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05583811	GCA_002286015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/015/GCA_002286015.1_ASM228601v1	-	D422
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1063	67.7	chromosome:NZ_CP016960.1/CP016960.1	-	1	3978	3590	9/5/17	9/7/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05583813	GCA_002286035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/035/GCA_002286035.1_ASM228603v1	-	D735
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1043	67.7	chromosome:NZ_CP016961.1/CP016961.1	-	1	3971	3583	9/5/17	9/7/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05583810	GCA_002286055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/055/GCA_002286055.1_ASM228605v1	-	C934
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10324	67.7	chromosome:NZ_CP016962.1/CP016962.1	-	1	3971	3587	9/5/17	9/7/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05583816	GCA_002286075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/075/GCA_002286075.1_ASM228607v1	-	E898
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1032	67.7	chromosome:NZ_CP016963.1/CP016963.1	-	1	3970	3586	9/5/17	9/7/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05583814	GCA_002286095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/095/GCA_002286095.1_ASM228609v1	-	D799
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10226	67.7	chromosome:NZ_CP016964.1/CP016964.1	-	1	3970	3586	9/5/17	9/7/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05583812	GCA_002286115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/115/GCA_002286115.1_ASM228611v1	-	D717
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10534	67.7	chromosome:NZ_CP016966.1/CP016966.1	-	1	3971	3584	9/5/17	9/7/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05583850	GCA_002286135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/135/GCA_002286135.1_ASM228613v1	-	E541
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10113	67.7	chromosome:NZ_CP016967.1/CP016967.1	-	1	3970	3587	9/5/17	9/7/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05583849	GCA_002286155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/155/GCA_002286155.1_ASM228615v1	-	E025
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10639	67.7	chromosome:NZ_CP016968.1/CP016968.1	-	1	3975	3591	9/5/17	9/7/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05583848	GCA_002286175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/175/GCA_002286175.1_ASM228617v1	-	D925
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11263	67.7	chromosome:NZ_CP017119.1/CP017119.1	-	1	3985	3551	9/5/17	9/7/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05716053	GCA_002286295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/295/GCA_002286295.1_ASM228629v1	-	J160
Paraburkholderia graminis C4D1M	396598	PRJNA20537	20537	Proteobacteria	Betaproteobacteria	7.47726	62.9	-	ABLD01	70	6707	6332	3/17/08	5/18/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN02441790	GCA_000172415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/415/GCA_000172415.1_ASM17241v1	-	C4D1M
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1075	67.7	chromosome:NZ_CP017120.1/CP017120.1	-	1	3977	3564	9/5/17	9/7/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05716055	GCA_002286315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/315/GCA_002286315.1_ASM228631v1	-	J209
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10738	67.7	chromosome:NZ_CP017121.1/CP017121.1	-	1	3980	3578	9/5/17	9/7/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05716054	GCA_002286335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/335/GCA_002286335.1_ASM228633v1	-	J172
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10637	67.7	chromosome:NZ_CP017122.1/CP017122.1	-	1	3980	3578	9/5/17	9/7/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05716052	GCA_002286355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/355/GCA_002286355.1_ASM228635v1	-	J154
Pedosphaera parvula Ellin514	320771	PRJNA20839	20839	PVC group	Verrucomicrobia	7.41422	52.6	-	ABOX02	102	6326	6110	4/22/08	5/19/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000631	GCA_000172555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/555/GCA_000172555.1_ASM17255v1	21460084	Ellin514
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10637	67.7	chromosome:NZ_CP017123.1/CP017123.1	-	1	3982	3582	9/5/17	9/7/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05716051	GCA_002286375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/375/GCA_002286375.1_ASM228637v1	-	J153
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10124	67.7	chromosome:NZ_CP016965.1/CP016965.1	-	1	3968	3584	9/5/17	9/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05583818	GCA_002310915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/915/GCA_002310915.1_ASM231091v1	-	F013
Bordetella pertussis	520	PRJEB6403	251923	Proteobacteria	Betaproteobacteria	4.1085	67.7	chromosome 1:NZ_LT906471.1/LT906471.1	-	1	3974	3588	8/15/17	8/28/17	Complete Genome	SC	SAMEA3936801	GCA_900186845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/845/GCA_900186845.1_46338_E02	-	NCTC13666
Gemmata obscuriglobus UQM 2246	214688	PRJNA20997	20997	PVC group	Planctomycetes	9.16184	67.2	-	ABGO01	922	7797	7138	10/23/07	5/18/17	Contig	J. Craig Venter Institute	SAMN02436172	GCA_000171775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/775/GCA_000171775.1_ASM17177v1	-	UQM 2246
Bordetella pertussis	520	PRJEB6403	251923	Proteobacteria	Betaproteobacteria	4.12264	67.7	chromosome 1:NZ_LT906484.1/LT906484.1	-	1	3987	3579	8/15/17	8/28/17	Complete Genome	SC	SAMEA3643328	GCA_900187345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/345/GCA_900187345.1_42650_A02	-	NCTC13667
Actinospica robiniae DSM 44927	479430	PRJNA50863	50863	Terrabacteria group	Actinobacteria	9.91889	70.3	-	AZAN01	1	8573	8262	12/5/13	4/17/17	Scaffold	JGI	SAMN02597168	GCA_000504285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/285/GCA_000504285.1_ASM50428v1	-	DSM 44927
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10091	67.7	chromosome:NZ_CP021401.1/CP021401.1	-	1	3968	3595	8/3/17	8/7/17	Complete Genome	Centers for Disease Control and Prevention	SAMN07137592	GCA_002240435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/435/GCA_002240435.1_ASM224043v1	-	J078
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10313	67.7	chromosome:NZ_CP021402.1/CP021402.1	-	1	3968	3597	8/3/17	8/7/17	Complete Genome	Centers for Disease Control and Prevention	SAMN07137591	GCA_002240475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/475/GCA_002240475.1_ASM224047v1	-	H696
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11458	67.7	chromosome:NZ_CP021403.1/CP021403.1	-	1	3977	3519	8/3/17	8/7/17	Complete Genome	Centers for Disease Control and Prevention	SAMN07137593	GCA_002240495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/495/GCA_002240495.1_ASM224049v1	-	J473
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11034	67.7	chromosome:NZ_CP022362.1/CP022362.1	-	1	3983	3597	8/3/17	8/7/17	Complete Genome	Centers for Disease Control and Prevention	SAMN07327524	GCA_002240515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/515/GCA_002240515.1_ASM224051v1	-	J625
Bordetella pertussis	520	PRJNA376518	376518	Proteobacteria	Betaproteobacteria	4.10552	67.7	chromosome:NZ_CP019957.1/CP019957.1	-	1	3967	3619	3/6/17	3/8/17	Complete Genome	Virginia Tech	SAMN06434363	GCA_002021795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/795/GCA_002021795.1_ASM202179v1	-	Pelita III
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10536	67.7	chromosome:NZ_CP011167.1/CP011167.1	-	1	3970	3629	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455331	GCA_001984925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/925/GCA_001984925.1_ASM198492v1	28167525	C571
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10025	67.7	chromosome:NZ_CP011168.1/CP011168.1	-	1	3967	3624	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455332	GCA_001984945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/945/GCA_001984945.1_ASM198494v1	28167525	C958
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1011	67.7	chromosome:NZ_CP011169.1/CP011169.1	-	1	3962	3619	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455333	GCA_001984965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/965/GCA_001984965.1_ASM198496v1	28167525	D521
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1064	67.7	chromosome:NZ_CP011170.1/CP011170.1	-	1	3973	3635	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455334	GCA_001984985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/985/GCA_001984985.1_ASM198498v1	28167525	D879
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10431	67.7	chromosome:NZ_CP011171.1/CP011171.1	-	1	3966	3621	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455335	GCA_001985005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/005/GCA_001985005.1_ASM198500v1	28167525	E150
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10221	67.7	chromosome:NZ_CP011172.1/CP011172.1	-	1	3964	3619	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455336	GCA_001985025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/025/GCA_001985025.1_ASM198502v1	28167525	E555
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10163	67.7	chromosome:NZ_CP011173.1/CP011173.1	-	1	3963	3621	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455337	GCA_001985045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/045/GCA_001985045.1_ASM198504v1	28167525	E587
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10325	67.7	chromosome:NZ_CP011174.1/CP011174.1	-	1	3965	3623	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455338	GCA_001985065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/065/GCA_001985065.1_ASM198506v1	28167525	E809
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11641	67.7	chromosome:NZ_CP011175.1/CP011175.1	-	1	3977	3621	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455339	GCA_001985085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/085/GCA_001985085.1_ASM198508v1	28167525	E976
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1022	67.7	chromosome:NZ_CP011176.1/CP011176.1	-	1	3969	3628	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455340	GCA_001985105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/105/GCA_001985105.1_ASM198510v1	28167525	F011
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10589	67.7	chromosome:NZ_CP011177.1/CP011177.1	-	1	3971	3630	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455341	GCA_001985125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/125/GCA_001985125.1_ASM198512v1	28167525	F034
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10748	67.7	chromosome:NZ_CP011178.1/CP011178.1	-	1	3968	3625	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455342	GCA_001985145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/145/GCA_001985145.1_ASM198514v1	28167525	F658
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10321	67.7	chromosome:NZ_CP011179.1/CP011179.1	-	1	3966	3621	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455343	GCA_001985165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/165/GCA_001985165.1_ASM198516v1	28167525	F670
Verrucomicrobium spinosum DSM 4136 = JCM 18804	240016	PRJNA10620	10620	PVC group	Verrucomicrobia	8.22086	60.3	chromosome:NZ_ABIZ01000001.1/ABIZ01000001.1	ABIZ01	1	6420	6230	1/2/08	5/19/17	Chromosome	TIGR	SAMN02436175	GCA_000172155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/155/GCA_000172155.1_ASM17215v1	-	DSM 4136
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10849	67.7	chromosome:NZ_CP011181.1/CP011181.1	-	1	3976	3634	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455345	GCA_001985205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/205/GCA_001985205.1_ASM198520v1	28167525	F687
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10641	67.7	chromosome:NZ_CP011182.1/CP011182.1	-	1	3968	3624	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455346	GCA_001985225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/225/GCA_001985225.1_ASM198522v1	28167525	F948
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10266	67.7	chromosome:NZ_CP011183.1/CP011183.1	-	1	3968	3621	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455347	GCA_001985245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/245/GCA_001985245.1_ASM198524v1	28167525	H520
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10951	67.7	chromosome:NZ_CP011184.1/CP011184.1	-	1	3972	3623	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455348	GCA_001985265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/265/GCA_001985265.1_ASM198526v1	28167525	H579
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1037	67.7	chromosome:NZ_CP011185.1/CP011185.1	-	1	3966	3618	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455349	GCA_001985285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/285/GCA_001985285.1_ASM198528v1	28167525	H637
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10953	67.7	chromosome:NZ_CP011186.1/CP011186.1	-	1	3975	3627	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455350	GCA_001985305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/305/GCA_001985305.1_ASM198530v1	28167525	H665
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10744	67.7	chromosome:NZ_CP011187.1/CP011187.1	-	1	3970	3623	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455351	GCA_001985325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/325/GCA_001985325.1_ASM198532v1	28167525	H703
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10728	67.7	chromosome:NZ_CP011188.1/CP011188.1	-	1	3966	3622	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455352	GCA_001985345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/345/GCA_001985345.1_ASM198534v1	28167525	H707
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10848	67.7	chromosome:NZ_CP011189.1/CP011189.1	-	1	3973	3629	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455353	GCA_001985365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/365/GCA_001985365.1_ASM198536v1	28167525	H729
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11108	67.7	chromosome:NZ_CP011190.1/CP011190.1	-	1	3972	3615	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455354	GCA_001985385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/385/GCA_001985385.1_ASM198538v1	28167525	H740
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10176	67.7	chromosome:NZ_CP011191.1/CP011191.1	-	1	3970	3631	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455355	GCA_001985405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/405/GCA_001985405.1_ASM198540v1	28167525	H754
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10325	67.7	chromosome:NZ_CP011192.1/CP011192.1	-	1	3969	3624	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455356	GCA_001985425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/425/GCA_001985425.1_ASM198542v1	28167525	H765
Roseovarius nubinhibens ISM	89187	PRJNA13464	13464	Proteobacteria	Alphaproteobacteria	3.67624	63.9	-	AALY01	4	3532	3447	12/22/05	4/17/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436080	GCA_000152625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/625/GCA_000152625.1_ASM15262v1	-	ISM
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1064	67.7	chromosome:NZ_CP011193.1/CP011193.1	-	1	3970	3631	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455357	GCA_001985445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/445/GCA_001985445.1_ASM198544v1	28167525	H784
Shewanella benthica KT99	314608	PRJNA13387	13387	Proteobacteria	Gammaproteobacteria	4.35159	46	-	ABIC01	129	3959	3407	11/28/07	5/19/17	Contig	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436096	GCA_000172075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/075/GCA_000172075.1_ASM17207v1	-	KT99
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10231	67.7	chromosome:NZ_CP011194.1/CP011194.1	-	1	3962	3614	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455358	GCA_001985465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/465/GCA_001985465.1_ASM198546v1	28167525	H800
Listeria grayi DSM 20601	525367	PRJNA31517	31517	Terrabacteria group	Firmicutes	2.59832	41.6	-	ACCR02	4	2608	2509	12/22/08	2/26/17	Scaffold	Baylor College of Medicine	SAMN00001446	GCA_000148995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/995/GCA_000148995.1_ASM14899v1	-	DSM 20601
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10353	67.7	chromosome:NZ_CP011195.1/CP011195.1	-	1	3967	3628	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455359	GCA_001985485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/485/GCA_001985485.1_ASM198548v1	28167525	H806
Fulvimarina pelagi HTCC2506	314231	PRJNA13506	13506	Proteobacteria	Alphaproteobacteria	3.80624	61.2	-	AATP01	4	3559	3435	9/15/06	4/7/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436126	GCA_000153705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/705/GCA_000153705.1_ASM15370v1	20639329	HTCC2506
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10638	67.7	chromosome:NZ_CP011196.1/CP011196.1	-	1	3974	3625	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455360	GCA_001985505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/505/GCA_001985505.1_ASM198550v1	28167525	H810
Reinekea blandensis MED297	314283	PRJNA13534	13534	Proteobacteria	Gammaproteobacteria	4.52676	52.3	-	AAOE01	10	4203	4080	2/24/06	5/19/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436140	GCA_000153185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/185/GCA_000153185.1_ASM15318v1	-	MED297
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1065	67.7	chromosome:NZ_CP011197.1/CP011197.1	-	1	3965	3615	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455361	GCA_001985525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/525/GCA_001985525.1_ASM198552v1	28167525	H812
Congregibacter litoralis KT71	314285	PRJNA13585	13585	Proteobacteria	Gammaproteobacteria	4.35112	57.7	chromosome:NZ_CM002299.1/CM002299.1	AAOA02	1	7911	7716	2/23/06	4/17/17	Chromosome	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436113	GCA_000153125.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/125/GCA_000153125.2_ASM15312v2	"1,729,905,519,287,490"	KT71
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11165	67.7	chromosome:NZ_CP011198.1/CP011198.1	-	1	3973	3625	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455362	GCA_001985545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/545/GCA_001985545.1_ASM198554v1	28167525	I228
beta proteobacterium KB13	314607	PRJNA13602	13602	Proteobacteria	Betaproteobacteria	1.33433	35.4	-	ABXG01	1	1417	1369	9/24/08	4/17/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436273	GCA_000156155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/155/GCA_000156155.1_ASM15615v1	22675594	KB13
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10458	67.7	chromosome:NZ_CP011199.1/CP011199.1	-	1	3972	3629	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455363	GCA_001985565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/565/GCA_001985565.1_ASM198556v1	28167525	I238
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10595	67.7	chromosome:NZ_CP011200.1/CP011200.1	-	1	3963	3611	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455364	GCA_001985585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/585/GCA_001985585.1_ASM198558v1	28167525	I373
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10849	67.7	chromosome:NZ_CP011201.1/CP011201.1	-	1	3976	3629	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455365	GCA_001985605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/605/GCA_001985605.1_ASM198560v1	28167525	I387
Yersinia bercovieri ATCC 43970	349968	PRJNA16104	16104	Proteobacteria	Gammaproteobacteria	4.34729	48.9	-	AALC02	229	4012	3801	10/19/05	5/19/17	Contig	Naval Medical Research Center	SAMN00005351	GCA_000167975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/975/GCA_000167975.1_ASM16797v1	-	ATCC 43970
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10848	67.7	chromosome:NZ_CP011202.1/CP011202.1	-	1	3974	3626	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455366	GCA_001985625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/625/GCA_001985625.1_ASM198562v1	28167525	I602
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10641	67.7	chromosome:NZ_CP011203.1/CP011203.1	-	1	3973	3627	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455367	GCA_001985645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/645/GCA_001985645.1_ASM198564v1	28167525	I730
Ktedonobacter racemifer DSM 44963	485913	PRJNA27943	27943	Terrabacteria group	Chloroflexi	13.6616	53.8	-	ADVG01	10	12119	11168	6/4/10	5/18/17	Scaffold	US DOE Joint Genome Institute (JGI-PGF)	SAMN02441796	GCA_000178855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/855/GCA_000178855.1_ASM17885v1	22180814	SOSP1-21
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11059	67.7	chromosome:NZ_CP011204.1/CP011204.1	-	1	3970	3620	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455368	GCA_001985665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/665/GCA_001985665.1_ASM198566v1	28167525	I752
Didymococcus colitermitum TAV2	278957	PRJNA18333	18333	PVC group	Verrucomicrobia	5.6715	60.9	-	ABEA03	225	4881	4435	7/12/07	6/20/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN02256391	GCA_000171235.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/235/GCA_000171235.2_ASM17123v2	-	TAV2
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1064	67.7	chromosome:NZ_CP011205.1/CP011205.1	-	1	3974	3628	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455369	GCA_001985685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/685/GCA_001985685.1_ASM198568v1	28167525	I763
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10639	67.7	chromosome:NZ_CP011206.1/CP011206.1	-	1	3975	3631	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455370	GCA_001985705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/705/GCA_001985705.1_ASM198570v1	28167525	I915
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11274	67.7	chromosome:NZ_CP011207.1/CP011207.1	-	1	3980	3640	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455371	GCA_001985725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/725/GCA_001985725.1_ASM198572v1	28167525	I944
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10323	67.7	chromosome:NZ_CP011208.1/CP011208.1	-	1	3970	3630	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03455372	GCA_001985745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/745/GCA_001985745.1_ASM198574v1	28167525	J018
Flavobacteria bacterium MS024-2A	487796	PRJNA28049	28049	FCB group	Bacteroidetes/Chlorobi group	1.90548	35.7	-	ABVV01	17	1774	1696	3/16/09	4/17/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN02441803	GCA_000173095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/095/GCA_000173095.1_ASM17309v1	-	MS024-2A
Flavobacteria bacterium MS024-3C	487797	PRJNA28051	28051	FCB group	Bacteroidetes/Chlorobi group	1.51525	38.7	-	ABVW01	21	1368	1287	3/16/09	4/17/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN02441804	GCA_000173115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/115/GCA_000173115.1_ASM17311v1	-	MS024-3C
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10531	67.7	chromosome:NZ_CP012078.1/CP012078.1	-	1	3969	3623	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03854490	GCA_001985765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/765/GCA_001985765.1_ASM198576v1	28167525	H681
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10534	67.7	chromosome:NZ_CP012079.1/CP012079.1	-	1	3972	3627	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03854491	GCA_001985785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/785/GCA_001985785.1_ASM198578v1	28167525	H852
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1022	67.7	chromosome:NZ_CP012080.1/CP012080.1	-	1	3968	3625	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03854492	GCA_001985805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/805/GCA_001985805.1_ASM198580v1	28167525	I106
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10875	67.7	chromosome:NZ_CP012081.1/CP012081.1	-	1	3973	3628	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03854493	GCA_001985825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/825/GCA_001985825.1_ASM198582v1	28167525	I351
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10748	67.7	chromosome:NZ_CP012082.1/CP012082.1	-	1	3974	3630	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03854494	GCA_001985845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/845/GCA_001985845.1_ASM198584v1	28167525	I743
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10956	67.7	chromosome:NZ_CP012083.1/CP012083.1	-	1	3968	3619	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03854495	GCA_001985865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/865/GCA_001985865.1_ASM198586v1	28167525	I751
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10425	67.7	chromosome:NZ_CP012084.1/CP012084.1	-	1	3969	3627	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03854496	GCA_001985885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/885/GCA_001985885.1_ASM198588v1	28167525	I976
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10738	67.7	chromosome:NZ_CP012085.1/CP012085.1	-	1	3972	3622	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03854497	GCA_001985905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/905/GCA_001985905.1_ASM198590v1	28167525	J010
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10533	67.7	chromosome:NZ_CP012086.1/CP012086.1	-	1	3973	3626	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03854498	GCA_001985925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/925/GCA_001985925.1_ASM198592v1	28167525	J013
Streptomyces sviceus ATCC 29083	463191	PRJNA28555	28555	Terrabacteria group	Actinobacteria	9.31349	70.1451	chromosome:NZ_CM000951.1/CM000951.1	ABJJ02	1	8559	7503	2/28/08	5/19/17	Chromosome	Broad Institute	SAMN02595223	GCA_000154965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/965/GCA_000154965.1_ASM15496v1	-	ATCC 29083
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10744	67.7	chromosome:NZ_CP012087.1/CP012087.1	-	1	3975	3629	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03854499	GCA_001985945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/945/GCA_001985945.1_ASM198594v1	28167525	J038
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10638	67.7	chromosome:NZ_CP012088.1/CP012088.1	-	1	3974	3624	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03854500	GCA_001985965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/965/GCA_001985965.1_ASM198596v1	28167525	J107
Borreliella spielmanii A14S	498742	PRJNA28635	28635	Spirochaetes	Spirochaetia	1.25256	27.6945	plasmid A14S_cp26:NC_012132.1/CP001467.1; plasmid A14S_lp17:NC_012200.1/CP001468.1; plasmid A14S_lp28-3:NC_012183.1/CP001471.1; plasmid A14S_lp28-4:NC_012173.1/CP001470.1; plasmid A14S_lp28-8:NC_012181.1/CP001465.1; plasmid A14S_lp36:NC_012190.1/CP001466.1; plasmid A14S_lp38:NC_012176.1/CP001464.1; plasmid A14S_lp54:NC_012164.1/CP001469.1	ABKB02	49	1262	1118	2/6/08	9/1/17	Scaffold	J. Craig Venter Institute	SAMN02436233	GCA_000181895.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/181/895/GCA_000181895.2_ASM18189v2	-	A14S
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10257	67.7	chromosome:NZ_CP012089.1/CP012089.1	-	1	3960	3615	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03854501	GCA_001985985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/985/GCA_001985985.1_ASM198598v1	28167525	J169
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10847	67.7	chromosome:NZ_CP012129.1/CP012129.1	-	1	3969	3624	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03877217	GCA_001986005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/005/GCA_001986005.1_ASM198600v1	28167525	G057
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.0887	67.7	chromosome:NZ_CP012130.1/CP012130.1	-	1	3957	3614	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03877218	GCA_001986025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/025/GCA_001986025.1_ASM198602v1	28167525	H639
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10743	67.7	chromosome:NZ_CP012131.1/CP012131.1	-	1	3975	3629	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03877219	GCA_001986045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/045/GCA_001986045.1_ASM198604v1	28167525	I150
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10651	67.7	chromosome:NZ_CP012132.1/CP012132.1	-	1	3966	3617	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03877220	GCA_001986065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/065/GCA_001986065.1_ASM198606v1	28167525	I187
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10535	67.7	chromosome:NZ_CP012133.1/CP012133.1	-	1	3971	3627	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03877221	GCA_001986085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/085/GCA_001986085.1_ASM198608v1	28167525	I259
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10743	67.7	chromosome:NZ_CP012134.1/CP012134.1	-	1	3975	3627	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03877222	GCA_001986105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/105/GCA_001986105.1_ASM198610v1	28167525	I464
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10954	67.7	chromosome:NZ_CP011234.1/CP011234.1	-	1	3970	3628	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03464271	GCA_001986155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/155/GCA_001986155.1_ASM198615v1	28167525	H320
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1037	67.7	chromosome:NZ_CP011235.1/CP011235.1	-	1	3966	3619	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03464273	GCA_001986175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/175/GCA_001986175.1_ASM198617v1	28167525	H834
Arthrospira maxima CS-328	513049	PRJNA29085	29085	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.00331	44.8	-	ABYK01	129	5894	5018	10/15/08	4/17/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN02441783	GCA_000173555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/555/GCA_000173555.1_ASM17355v1	21890670	CS-328
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10533	67.7	chromosome:NZ_CP011236.1/CP011236.1	-	1	3965	3619	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03464272	GCA_001986195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/195/GCA_001986195.1_ASM198619v1	28167525	H710
Butyrivibrio proteoclasticus P6B7	1410650	PRJNA223495	223495	Terrabacteria group	Firmicutes	3.92784	41.9	-	JHWL01	53	3538	3415	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02744024	GCA_000622085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/085/GCA_000622085.1_ASM62208v1	-	P6B7
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1065	67.7	chromosome:NZ_CP011237.1/CP011237.1	-	1	3964	3615	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03464274	GCA_001986215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/215/GCA_001986215.1_ASM198621v1	28167525	H851
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10218	67.7	chromosome:NZ_CP011238.1/CP011238.1	-	1	3969	3622	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03464275	GCA_001986235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/235/GCA_001986235.1_ASM198623v1	28167525	H911
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10428	67.7	chromosome:NZ_CP011239.1/CP011239.1	-	1	3965	3623	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03464276	GCA_001986255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/255/GCA_001986255.1_ASM198625v1	28167525	H915
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10635	67.7	chromosome:NZ_CP011240.1/CP011240.1	-	1	3974	3633	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03464277	GCA_001986275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/275/GCA_001986275.1_ASM198627v1	28167525	I075
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10639	67.7	chromosome:NZ_CP011241.1/CP011241.1	-	1	3974	3628	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03464278	GCA_001986295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/295/GCA_001986295.1_ASM198629v1	28167525	I112
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1065	67.7	chromosome:NZ_CP011242.1/CP011242.1	-	1	3965	3613	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03464279	GCA_001986315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/315/GCA_001986315.1_ASM198631v1	28167525	I975
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10971	67.7	chromosome:NZ_CP011243.1/CP011243.1	-	1	3978	3629	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03464280	GCA_001986335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/335/GCA_001986335.1_ASM198633v1	28167525	I998
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1065	67.7	chromosome:NZ_CP011244.1/CP011244.1	-	1	3964	3614	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03464281	GCA_001986355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/355/GCA_001986355.1_ASM198635v1	28167525	J022
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10328	67.7	chromosome:NZ_CP011687.1/CP011687.1	-	1	3964	3621	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702609	GCA_001986375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/375/GCA_001986375.1_ASM198637v1	28167525	C505
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10325	67.7	chromosome:NZ_CP011688.1/CP011688.1	-	1	3965	3623	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702610	GCA_001986415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/415/GCA_001986415.1_ASM198641v1	28167525	C742
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10851	67.7	chromosome:NZ_CP011689.1/CP011689.1	-	1	3969	3625	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702611	GCA_001986435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/435/GCA_001986435.1_ASM198643v1	28167525	D175
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10418	67.7	chromosome:NZ_CP011690.1/CP011690.1	-	1	3962	3618	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702612	GCA_001986455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/455/GCA_001986455.1_ASM198645v1	28167525	D321
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10117	67.7	chromosome:NZ_CP011691.1/CP011691.1	-	1	3969	3630	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702613	GCA_001986475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/475/GCA_001986475.1_ASM198647v1	28167525	D502
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10113	67.7	chromosome:NZ_CP011692.1/CP011692.1	-	1	3968	3627	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702614	GCA_001986495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/495/GCA_001986495.1_ASM198649v1	-	E024
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10639	67.7	chromosome:NZ_CP011693.1/CP011693.1	-	1	3972	3629	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702615	GCA_001986515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/515/GCA_001986515.1_ASM198651v1	-	E530
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11061	67.7	chromosome:NZ_CP011694.1/CP011694.1	-	1	3973	3627	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702616	GCA_001986535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/535/GCA_001986535.1_ASM198653v1	28167525	H346
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10534	67.7	chromosome:NZ_CP011695.1/CP011695.1	-	1	3967	3621	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702617	GCA_001986555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/555/GCA_001986555.1_ASM198655v1	28167525	H437
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10534	67.7	chromosome:NZ_CP011696.1/CP011696.1	-	1	3973	3627	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702618	GCA_001986575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/575/GCA_001986575.1_ASM198657v1	28167525	H762
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11059	67.7	chromosome:NZ_CP011697.1/CP011697.1	-	1	3977	3634	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702619	GCA_001986595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/595/GCA_001986595.1_ASM198659v1	28167525	H763
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10533	67.7	chromosome:NZ_CP011698.1/CP011698.1	-	1	3974	3627	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702620	GCA_001986615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/615/GCA_001986615.1_ASM198661v1	28167525	H764
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10426	67.7	chromosome:NZ_CP011699.1/CP011699.1	-	1	3971	3627	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702621	GCA_001986635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/635/GCA_001986635.1_ASM198663v1	28167525	H766
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10639	67.7	chromosome:NZ_CP011700.1/CP011700.1	-	1	3974	3626	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702622	GCA_001986655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/655/GCA_001986655.1_ASM198665v1	28167525	H768
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11164	67.7	chromosome:NZ_CP011701.1/CP011701.1	-	1	3979	3628	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702623	GCA_001986675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/675/GCA_001986675.1_ASM198667v1	28167525	H773
Paraburkholderia tuberum	157910	PRJEB15772	347728	Proteobacteria	Betaproteobacteria	8.97731	63	-	FNKX01	5	8339	7614	10/20/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05445850	GCA_900101795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/795/GCA_900101795.1_IMG-taxon_2693429822_annotated_assembly	-	DUS833
Streptococcus equinus	1335	PRJNA239123	239123	Terrabacteria group	Firmicutes	1.93074	37.5	-	JNLO01	1	1896	1718	3/27/15	4/3/17	Contig	DOE Joint Genome Institute	SAMN02841210	GCA_000964315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/315/GCA_000964315.1_ASM96431v1	-	AG46
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10649	67.7	chromosome:NZ_CP011702.1/CP011702.1	-	1	3966	3612	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702624	GCA_001986695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/695/GCA_001986695.1_ASM198669v1	28167525	H775
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10629	67.7	chromosome:NZ_CP011703.1/CP011703.1	-	1	3972	3594	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702625	GCA_001986715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/715/GCA_001986715.1_ASM198671v1	28167525	H779
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10848	67.7	chromosome:NZ_CP011704.1/CP011704.1	-	1	3971	3626	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702626	GCA_001986735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/735/GCA_001986735.1_ASM198673v1	28167525	H787
Bacillus pseudomycoides DSM 12442	527000	PRJNA29707	29707	Terrabacteria group	Firmicutes	5.78251	35.4	chromosome:NZ_CM000745.1/CM000745.1	ACMX01	1	12068	11412	4/30/09	6/15/17	Chromosome	Naval Medical Research Center	SAMN00727631	GCA_000161455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/455/GCA_000161455.1_ASM16145v1	22645259	DSM 12442
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11164	67.7	chromosome:NZ_CP011705.1/CP011705.1	-	1	3980	3631	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702627	GCA_001986755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/755/GCA_001986755.1_ASM198675v1	28167525	H842
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10325	67.7	chromosome:NZ_CP011706.1/CP011706.1	-	1	3971	3618	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702628	GCA_001986775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/775/GCA_001986775.1_ASM198677v1	28167525	H847
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1032	67.7	chromosome:NZ_CP011707.1/CP011707.1	-	1	3968	3628	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702629	GCA_001986795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/795/GCA_001986795.1_ASM198679v1	28167525	H849
marine gamma proteobacterium HTCC2148	247634	PRJNA30725	30725	Proteobacteria	Gammaproteobacteria	4.32694	52.9	-	ABXQ01	31	3858	3720	10/1/08	5/19/17	Scaffold	Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436226	GCA_000156295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/295/GCA_000156295.1_ASM15629v1	20472793	HTCC2148
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10954	67.7	chromosome:NZ_CP011708.1/CP011708.1	-	1	3976	3631	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702630	GCA_001986815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/815/GCA_001986815.1_ASM198681v1	28167525	H853
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1065	67.7	chromosome:NZ_CP011709.1/CP011709.1	-	1	3964	3615	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702631	GCA_001986835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/835/GCA_001986835.1_ASM198683v1	28167525	H864
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11164	67.7	chromosome:NZ_CP011710.1/CP011710.1	-	1	3978	3633	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702632	GCA_001986855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/855/GCA_001986855.1_ASM198685v1	28167525	H866
Pseudogulbenkiania ferrooxidans 2002	279714	PRJNA30761	30761	Proteobacteria	Betaproteobacteria	4.22879	64.7	-	ACIS01	20	3988	3814	3/6/09	5/19/17	Scaffold	US DOE Joint Genome Institute (JGI-PGF)	SAMN00001906	GCA_000174355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/355/GCA_000174355.1_ASM17435v1	-	2002
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10633	67.7	chromosome:NZ_CP011711.1/CP011711.1	-	1	3972	3625	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702633	GCA_001986875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/875/GCA_001986875.1_ASM198687v1	28167525	H878
Dethiobacter alkaliphilus AHT 1	555088	PRJNA30985	30985	Terrabacteria group	Firmicutes	3.11675	48.5	-	ACJM01	34	3164	3067	3/17/09	4/17/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN02441789	GCA_000174415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/415/GCA_000174415.1_ASM17441v1	-	AHT 1
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10955	67.7	chromosome:NZ_CP011712.1/CP011712.1	-	1	3976	3632	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702634	GCA_001986895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/895/GCA_001986895.1_ASM198689v1	28167525	H883
Desulfonatronospira thiodismutans ASO3-1	555779	PRJNA31051	31051	Proteobacteria	delta/epsilon subdivisions	4.10739	51.3	-	ACJN02	5	3900	3729	3/17/09	5/18/17	Scaffold	US DOE Joint Genome Institute (JGI-PGF)	SAMN02441800	GCA_000174435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/435/GCA_000174435.1_ASM17443v1	-	ASO3-1
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10955	67.7	chromosome:NZ_CP011713.1/CP011713.1	-	1	3976	3618	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702635	GCA_001986915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/915/GCA_001986915.1_ASM198691v1	28167525	H884
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11059	67.7	chromosome:NZ_CP011714.1/CP011714.1	-	1	3980	3633	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702636	GCA_001986935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/935/GCA_001986935.1_ASM198693v1	28167525	H910
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10955	67.7	chromosome:NZ_CP011715.1/CP011715.1	-	1	3977	3630	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702637	GCA_001986955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/955/GCA_001986955.1_ASM198695v1	28167525	I069
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11269	67.7	chromosome:NZ_CP011716.1/CP011716.1	-	1	3981	3633	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702638	GCA_001986975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/975/GCA_001986975.1_ASM198697v1	28167525	I088
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11059	67.7	chromosome:NZ_CP011717.1/CP011717.1	-	1	3978	3631	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702639	GCA_001986995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/995/GCA_001986995.1_ASM198699v1	28167525	I089
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11161	67.7	chromosome:NZ_CP011718.1/CP011718.1	-	1	3972	3626	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702640	GCA_001987015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/015/GCA_001987015.1_ASM198701v1	28167525	I110
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10638	67.7	chromosome:NZ_CP011719.1/CP011719.1	-	1	3974	3628	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702641	GCA_001987035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/035/GCA_001987035.1_ASM198703v1	28167525	I111
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10324	67.7	chromosome:NZ_CP011720.1/CP011720.1	-	1	3970	3630	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702642	GCA_001987055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/055/GCA_001987055.1_ASM198705v1	28167525	I113
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10322	67.7	chromosome:NZ_CP011721.1/CP011721.1	-	1	3963	3619	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702643	GCA_001987075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/075/GCA_001987075.1_ASM198707v1	28167525	I127
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10954	67.7	chromosome:NZ_CP011722.1/CP011722.1	-	1	3976	3632	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702644	GCA_001987095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/095/GCA_001987095.1_ASM198709v1	28167525	I135
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10745	67.7	chromosome:NZ_CP011723.1/CP011723.1	-	1	3968	3625	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702645	GCA_001987115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/115/GCA_001987115.1_ASM198711v1	28167525	I136
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10425	67.7	chromosome:NZ_CP011724.1/CP011724.1	-	1	3969	3629	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702646	GCA_001987135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/135/GCA_001987135.1_ASM198713v1	28167525	I257
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10425	67.7	chromosome:NZ_CP011725.1/CP011725.1	-	1	3970	3630	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702647	GCA_001987155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/155/GCA_001987155.1_ASM198715v1	28167525	I263
Lactobacillus crispatus ST1	748671	PRJEA46813	46813	Terrabacteria group	Firmicutes	2.04316	36.9	chromosome:NC_014106.1/FN692037.1	-	1	2036	1845	4/21/10	3/30/17	Chromosome	"Institute of Biotechnology, University of Helsinki, Finland"	SAMEA2272191	GCA_000091765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/091/765/GCA_000091765.1_ASM9176v1	20435723	ST1
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10322	67.7	chromosome:NZ_CP011726.1/CP011726.1	-	1	3968	3628	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702648	GCA_001987175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/175/GCA_001987175.1_ASM198717v1	28167525	I270
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10954	67.7	chromosome:NZ_CP011727.1/CP011727.1	-	1	3980	3636	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702649	GCA_001987195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/195/GCA_001987195.1_ASM198719v1	28167525	I271
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11043	67.7	chromosome:NZ_CP011728.1/CP011728.1	-	1	3979	3634	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702650	GCA_001987215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/215/GCA_001987215.1_ASM198721v1	28167525	I273
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1064	67.7	chromosome:NZ_CP011729.1/CP011729.1	-	1	3974	3633	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702651	GCA_001987235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/235/GCA_001987235.1_ASM198723v1	28167525	I289
Rhodobacteraceae bacterium KLH11	467661	PRJNA31351	31351	Proteobacteria	Alphaproteobacteria	4.4875	57.6	-	ACCW01	6	4363	4146	12/22/08	6/19/17	Scaffold	Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436222	GCA_000158135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/135/GCA_000158135.1_ASM15813v1	21742885	KLH11
gamma proteobacterium NOR5-3	566466	PRJNA31353	31353	Proteobacteria	Gammaproteobacteria	4.20808	56.3	-	ACCX01	6	3732	3605	12/22/08	5/19/17	Scaffold	Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436223	GCA_000158155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/155/GCA_000158155.1_ASM15815v1	23705883	NOR5-3
Luminiphilus syltensis NOR5-1B	565045	PRJNA31355	31355	Proteobacteria	Gammaproteobacteria	3.26154	56.7	-	ACCY01	1	2961	2862	12/22/08	4/7/17	Scaffold	Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436313	GCA_000158175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/175/GCA_000158175.1_ASM15817v1	23705883	NOR5-1B
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1085	67.7	chromosome:NZ_CP011730.1/CP011730.1	-	1	3973	3629	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702652	GCA_001987255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/255/GCA_001987255.1_ASM198725v1	28167525	I315
Streptomyces albus subsp. albus	67257	PRJNA238534	238534	Terrabacteria group	Actinobacteria	6.93832	73.2	-	JOID01	126	5862	5531	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645498	GCA_000719865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/865/GCA_000719865.1_ASM71986v1	-	NRRL F-4971
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10743	67.7	chromosome:NZ_CP011731.1/CP011731.1	-	1	3975	3629	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702653	GCA_001987275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/275/GCA_001987275.1_ASM198727v1	28167525	I318
Serratia symbiotica	138074	PRJEB6106	251629	Proteobacteria	Gammaproteobacteria	3.58175	52.1	-	CCES01	32	3554	2919	7/4/14	4/10/17	Contig	université catholique de louvain	SAMEA2581874	GCA_000821185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/185/GCA_000821185.1_Serratia_symbiotica	25146134	type strain:CWBI-2.3
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1042	67.7	chromosome:NZ_CP011732.1/CP011732.1	-	1	3969	3629	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702654	GCA_001987295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/295/GCA_001987295.1_ASM198729v1	28167525	I331
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10743	67.7	chromosome:NZ_CP011733.1/CP011733.1	-	1	3975	3628	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702655	GCA_001987315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/315/GCA_001987315.1_ASM198731v1	28167525	I350
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11369	67.7	chromosome:NZ_CP011734.1/CP011734.1	-	1	3976	3628	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702656	GCA_001987335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/335/GCA_001987335.1_ASM198733v1	28167525	I375
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10429	67.7	chromosome:NZ_CP011735.1/CP011735.1	-	1	3972	3626	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702657	GCA_001987355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/355/GCA_001987355.1_ASM198735v1	28167525	I379
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.09193	67.7	chromosome:NZ_CP011736.1/CP011736.1	-	1	3951	3605	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702658	GCA_001987375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/375/GCA_001987375.1_ASM198737v1	28167525	I380
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1105	67.7	chromosome:NZ_CP011737.1/CP011737.1	-	1	3976	3628	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702659	GCA_001987395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/395/GCA_001987395.1_ASM198739v1	28167525	I382
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10428	67.7	chromosome:NZ_CP011738.1/CP011738.1	-	1	3969	3625	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702660	GCA_001987415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/415/GCA_001987415.1_ASM198741v1	28167525	I386
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10955	67.7	chromosome:NZ_CP011739.1/CP011739.1	-	1	3977	3631	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702661	GCA_001987435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/435/GCA_001987435.1_ASM198743v1	28167525	I452
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10641	67.7	chromosome:NZ_CP011740.1/CP011740.1	-	1	3973	3626	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702662	GCA_001987455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/455/GCA_001987455.1_ASM198745v1	28167525	I461
Acidovorax delafieldii	47920	PRJNA299404	299404	Proteobacteria	Betaproteobacteria	4.00739	64.4	-	LSHP01	150	3871	3719	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299412	GCA_001555775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/775/GCA_001555775.1_ASM155577v1	-	CCH4-A2
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1074	67.7	chromosome:NZ_CP011741.1/CP011741.1	-	1	3971	3620	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702663	GCA_001987475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/475/GCA_001987475.1_ASM198747v1	28167525	I728
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10534	67.7	chromosome:NZ_CP011742.1/CP011742.1	-	1	3973	3624	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702664	GCA_001987495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/495/GCA_001987495.1_ASM198749v1	28167525	I735
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10917	67.7	chromosome:NZ_CP011743.1/CP011743.1	-	1	3979	3632	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702665	GCA_001987515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/515/GCA_001987515.1_ASM198751v1	28167525	I754
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11165	67.7	chromosome:NZ_CP011744.1/CP011744.1	-	1	3973	3624	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702666	GCA_001987535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/535/GCA_001987535.1_ASM198753v1	28167525	I755
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11059	67.7	chromosome:NZ_CP011745.1/CP011745.1	-	1	3979	3630	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702667	GCA_001987555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/555/GCA_001987555.1_ASM198755v1	28167525	I762
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10435	67.7	chromosome:NZ_CP011746.1/CP011746.1	-	1	3965	3614	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702668	GCA_001987575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/575/GCA_001987575.1_ASM198757v1	28167525	I959
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1086	67.7	chromosome:NZ_CP011747.1/CP011747.1	-	1	3969	3619	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702669	GCA_001987595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/595/GCA_001987595.1_ASM198759v1	28167525	I965
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1076	67.7	chromosome:NZ_CP011748.1/CP011748.1	-	1	3972	3620	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702670	GCA_001987615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/615/GCA_001987615.1_ASM198761v1	28167525	I968
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11164	67.7	chromosome:NZ_CP011749.1/CP011749.1	-	1	3981	3637	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702671	GCA_001987635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/635/GCA_001987635.1_ASM198763v1	28167525	I977
Jonquetella anthropi DSM 22815	885272	PRJNA63635	63635	Synergistetes	Synergistia	1.67593	59.5	chromosome:NZ_CM001376.1/CM001376.1	AGRU01	1	1595	1513	12/12/11	4/7/17	Chromosome	JGI	SAMN02261412	GCA_000237805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/805/GCA_000237805.1_ASM23780v1	-	DSM 22815
Streptomyces ghanaensis ATCC 14672	566461	PRJNA32145	32145	Terrabacteria group	Actinobacteria	8.51192	71.4	-	ABYA01	3	7795	6863	12/12/08	5/19/17	Scaffold	Broad Institute	SAMN02595233	GCA_000156435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/435/GCA_000156435.1_ASM15643v1	-	ATCC 14672
Streptomyces roseosporus NRRL 15998	457431	PRJNA32147	32147	Terrabacteria group	Actinobacteria	7.81729	70.6	-	ABYB01	1	6927	6316	12/12/08	5/19/17	Scaffold	Broad Institute	SAMN02595234	GCA_000156455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/455/GCA_000156455.1_ASM15645v1	-	NRRL 15998
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11059	67.7	chromosome:NZ_CP011750.1/CP011750.1	-	1	3979	3631	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702672	GCA_001987655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/655/GCA_001987655.1_ASM198765v1	28167525	I978
Actinobacillus minor 202	591023	PRJNA32531	32531	Proteobacteria	Gammaproteobacteria	2.12715	39.3	-	ACFT01	154	2034	1930	2/9/09	4/7/17	Contig	McGill University	SAMN02470283	GCA_000174155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/155/GCA_000174155.1_ASM17415v1	19819087	202
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11059	67.7	chromosome:NZ_CP011751.1/CP011751.1	-	1	3975	3631	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702673	GCA_001987675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/675/GCA_001987675.1_ASM198767v1	28167525	J012
Eubacterium saphenum ATCC 49989	592031	PRJNA33149	33149	Terrabacteria group	Firmicutes	1.0849	40.6	-	ACON01	1	987	919	6/4/09	4/18/17	Scaffold	WUGSC	SAMN00008823	GCA_000161975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/975/GCA_000161975.1_ASM16197v1	-	ATCC 49989
Leptotrichia hofstadii F0254	634994	PRJNA33151	33151	Fusobacteria	Fusobacteriia	2.45645	30.8	-	ACVB02	10	2446	1996	8/11/09	4/10/17	Scaffold	WUGSC	SAMN00008833	GCA_000162955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/955/GCA_000162955.1_ASM16295v1	-	F0254
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10323	67.7	chromosome:NZ_CP011752.1/CP011752.1	-	1	3968	3626	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702674	GCA_001987695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/695/GCA_001987695.1_ASM198769v1	28167525	J016
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10756	67.7	chromosome:NZ_CP011753.1/CP011753.1	-	1	3969	3622	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702675	GCA_001987715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/715/GCA_001987715.1_ASM198771v1	28167525	J019
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10667	67.7	chromosome:NZ_CP011754.1/CP011754.1	-	1	3975	3628	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702676	GCA_001987735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/735/GCA_001987735.1_ASM198773v1	28167525	J021
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1065	67.7	chromosome:NZ_CP011755.1/CP011755.1	-	1	3965	3615	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702677	GCA_001987755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/755/GCA_001987755.1_ASM198775v1	28167525	J023
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10954	67.7	chromosome:NZ_CP011756.1/CP011756.1	-	1	3976	3630	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702678	GCA_001987775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/775/GCA_001987775.1_ASM198777v1	28167525	J027
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10529	67.7	chromosome:NZ_CP011757.1/CP011757.1	-	1	3973	3625	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702679	GCA_001987795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/795/GCA_001987795.1_ASM198779v1	28167525	J030
Wolbachia endosymbiont of Muscidifurax uniraptor	77037	PRJNA33275	33275	Proteobacteria	Alphaproteobacteria	0.867873	35.2	-	ACFP01	256	897	693	3/24/09	4/17/17	Scaffold	Uppsala University	SAMN02472032	GCA_000174095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/095/GCA_000174095.1_wUni_1.0	19307581	-
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10745	67.7	chromosome:NZ_CP011758.1/CP011758.1	-	1	3975	3629	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702680	GCA_001987815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/815/GCA_001987815.1_ASM198781v1	28167525	J039
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10743	67.7	chromosome:NZ_CP011759.1/CP011759.1	-	1	3974	3626	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702681	GCA_001987835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/835/GCA_001987835.1_ASM198783v1	28167525	J068
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11375	67.7	chromosome:NZ_CP011760.1/CP011760.1	-	1	3982	3636	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702682	GCA_001987855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/855/GCA_001987855.1_ASM198785v1	28167525	J072
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11272	67.7	chromosome:NZ_CP011761.1/CP011761.1	-	1	3981	3636	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702683	GCA_001987875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/875/GCA_001987875.1_ASM198787v1	28167525	J073
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10546	67.7	chromosome:NZ_CP011762.1/CP011762.1	-	1	3963	3613	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702684	GCA_001987895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/895/GCA_001987895.1_ASM198789v1	28167525	J076
Brucella neotomae 5K33	520456	PRJNA33567	33567	Proteobacteria	Alphaproteobacteria	3.32962	57.2	-	ACEH01	11	3332	3094	2/18/09	4/7/17	Scaffold	Broad Institute	SAMN02595289	GCA_000158715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/715/GCA_000158715.1_ASM15871v1	-	5K33
[Clostridium] papyrosolvens DSM 2782	588581	PRJNA33587	33587	Terrabacteria group	Firmicutes	4.91529	37	-	ACXX02	31	4281	4037	8/27/09	5/19/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002727	GCA_000175795.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/795/GCA_000175795.2_ASM17579v2	-	DSM 2782
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10635	67.7	chromosome:NZ_CP011763.1/CP011763.1	-	1	3975	3626	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702685	GCA_001987915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/915/GCA_001987915.1_ASM198791v1	28167525	J090
Streptomyces viridochromogenes DSM 40736	591159	PRJNA33607	33607	Terrabacteria group	Actinobacteria	8.65326	70.8	-	ACEZ01	1	7823	7056	2/26/09	5/19/17	Scaffold	Broad Institute	SAMN02595301	GCA_000158955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/955/GCA_000158955.1_ASM15895v1	-	DSM 40736
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10638	67.7	chromosome:NZ_CP011764.1/CP011764.1	-	1	3973	3623	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702686	GCA_001987935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/935/GCA_001987935.1_ASM198793v1	28167525	J091
Streptomyces griseoflavus Tu4000	467200	PRJNA33609	33609	Terrabacteria group	Actinobacteria	8.04704	69.6	-	ACFA01	1	7178	5944	2/26/09	5/19/17	Scaffold	Broad Institute	SAMN02595302	GCA_000158975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/975/GCA_000158975.1_ASM15897v1	-	Tu4000
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10747	67.7	chromosome:NZ_CP011765.1/CP011765.1	-	1	3975	3637	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702687	GCA_001987955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/955/GCA_001987955.1_ASM198795v1	28167525	J098
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10971	67.7	chromosome:NZ_CP011766.1/CP011766.1	-	1	3978	3628	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702688	GCA_001987975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/975/GCA_001987975.1_ASM198797v1	28167525	J100
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10638	67.7	chromosome:NZ_CP011767.1/CP011767.1	-	1	3972	3626	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702689	GCA_001987995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/987/995/GCA_001987995.1_ASM198799v1	28167525	J110
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1064	67.7	chromosome:NZ_CP011768.1/CP011768.1	-	1	3975	3632	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03702690	GCA_001988015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/015/GCA_001988015.1_ASM198801v1	28167525	J115
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.12265	67.7	chromosome:NZ_CP013075.1/CP013075.1	-	1	3984	3627	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04221179	GCA_001988035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/035/GCA_001988035.1_ASM198803v1	28167525	B201
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.13443	67.7	chromosome:NZ_CP013076.1/CP013076.1	-	1	3989	3638	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04221180	GCA_001988055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/055/GCA_001988055.1_ASM198805v1	28167525	B227
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1064	67.7	chromosome:NZ_CP013077.1/CP013077.1	-	1	3968	3623	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04221181	GCA_001988075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/075/GCA_001988075.1_ASM198807v1	28167525	C549
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1022	67.7	chromosome:NZ_CP013078.1/CP013078.1	-	1	3968	3625	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04221182	GCA_001988095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/095/GCA_001988095.1_ASM198809v1	28167525	C734
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10637	67.7	chromosome:NZ_CP013079.1/CP013079.1	-	1	3966	3622	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04221183	GCA_001988115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/115/GCA_001988115.1_ASM198811v1	28167525	C757
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10321	67.7	chromosome:NZ_CP013080.1/CP013080.1	-	1	3965	3619	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04221184	GCA_001988135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/135/GCA_001988135.1_ASM198813v1	28167525	E194
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10849	67.7	chromosome:NZ_CP013081.1/CP013081.1	-	1	3973	3634	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04221185	GCA_001988155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/155/GCA_001988155.1_ASM198815v1	28167525	E602
Rickettsia endosymbiont of Ixodes scapularis	444612	PRJNA33979	33979	Proteobacteria	Alphaproteobacteria	2.10009	33.3285	chromosome:NZ_CM000770.1/CM000770.1; plasmid pREIS1:NZ_CM000771.1/CM000771.1; plasmid pREIS2:NZ_CM000772.1/CM000772.1; plasmid pREIS3:NZ_CM000773.1/CM000773.1	ACLC01	20	2353	1782	6/3/09	4/17/17	Chromosome	JCVI	SAMN02436262	GCA_000160735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/735/GCA_000160735.1_ASM16073v1	-	-
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10639	67.7	chromosome:NZ_CP013082.1/CP013082.1	-	1	3973	3627	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04221186	GCA_001988175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/175/GCA_001988175.1_ASM198817v1	28167525	H382
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10431	67.7	chromosome:NZ_CP013083.1/CP013083.1	-	1	3971	3630	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04221187	GCA_001988195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/195/GCA_001988195.1_ASM198819v1	28167525	H682
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10414	67.7	chromosome:NZ_CP013084.1/CP013084.1	-	1	3971	3629	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04221188	GCA_001988215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/215/GCA_001988215.1_ASM198821v1	28167525	H698
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10509	67.7	chromosome:NZ_CP013085.1/CP013085.1	-	1	3971	3629	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04221189	GCA_001988235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/235/GCA_001988235.1_ASM198823v1	28167525	H706
Fusobacterium periodonticum 2_1_31	469599	PRJNA32473	32473	Fusobacteria	Fusobacteriia	2.54631	28.6	-	ACDC03	6	2468	2275	3/2/09	4/9/17	Scaffold	Broad Institute	SAMN02463707	GCA_000158215.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/215/GCA_000158215.3_Fuso_sp_2_1_31_V3	-	2_1_31
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1022	67.7	chromosome:NZ_CP013086.1/CP013086.1	-	1	3961	3618	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04221190	GCA_001988255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/255/GCA_001988255.1_ASM198825v1	28167525	H730
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10534	67.7	chromosome:NZ_CP013087.1/CP013087.1	-	1	3969	3622	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04221191	GCA_001988275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/275/GCA_001988275.1_ASM198827v1	28167525	H771
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10742	67.7	chromosome:NZ_CP013088.1/CP013088.1	-	1	3976	3625	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04221192	GCA_001988295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/295/GCA_001988295.1_ASM198829v1	28167525	J178
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11373	67.7	chromosome:NZ_CP013089.1/CP013089.1	-	1	3980	3632	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04221193	GCA_001988315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/315/GCA_001988315.1_ASM198831v1	28167525	J179
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11165	67.7	chromosome:NZ_CP013090.1/CP013090.1	-	1	3975	3624	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04221194	GCA_001988335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/335/GCA_001988335.1_ASM198833v1	28167525	J191
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11269	67.7	chromosome:NZ_CP013091.1/CP013091.1	-	1	3979	3631	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04221195	GCA_001988355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/355/GCA_001988355.1_ASM198835v1	28167525	J192
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10533	67.7	chromosome:NZ_CP013092.1/CP013092.1	-	1	3971	3624	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04221196	GCA_001988375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/375/GCA_001988375.1_ASM198837v1	28167525	J193
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10638	67.7	chromosome:NZ_CP013093.1/CP013093.1	-	1	3973	3624	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04221197	GCA_001988395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/395/GCA_001988395.1_ASM198839v1	28167525	J194
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10742	67.7	chromosome:NZ_CP013094.1/CP013094.1	-	1	3973	3625	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04221198	GCA_001988415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/415/GCA_001988415.1_ASM198841v1	28167525	J197
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10328	67.7	chromosome:NZ_CP013095.1/CP013095.1	-	1	3972	3625	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04221199	GCA_001988435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/435/GCA_001988435.1_ASM198843v1	28167525	J201
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10629	67.7	chromosome:NZ_CP013096.1/CP013096.1	-	1	3975	3629	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04221200	GCA_001988455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/455/GCA_001988455.1_ASM198845v1	28167525	J225
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10743	67.7	chromosome:NZ_CP013863.1/CP013863.1	-	1	3975	3625	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383599	GCA_001988475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/475/GCA_001988475.1_ASM198847v1	28167525	J296
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10533	67.7	chromosome:NZ_CP013864.1/CP013864.1	-	1	3975	3624	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383600	GCA_001988495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/495/GCA_001988495.1_ASM198849v1	28167525	J300
Citrobacter youngae ATCC 29220	500640	PRJNA28665	28665	Proteobacteria	Gammaproteobacteria	5.15416	52.7	-	ABWL02	10	4949	4682	10/1/08	4/17/17	Scaffold	Washington University Genome Sequencing Center	SAMN02415622	GCA_000155975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/975/GCA_000155975.1_ASM15597v1	-	ATCC 29220
Bacteroides finegoldii DSM 17565	483215	PRJNA27823	27823	FCB group	Bacteroidetes/Chlorobi group	4.8924	42.9	-	ABXI02	33	4201	3811	10/2/08	5/18/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008774	GCA_000156195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/195/GCA_000156195.1_ASM15619v1	-	DSM 17565
[Bacteroides] pectinophilus ATCC 43243	483218	PRJNA27825	27825	Terrabacteria group	Firmicutes	3.02833	41.9	-	ABVQ01	9	2954	2623	11/14/08	4/17/17	Scaffold	Washington University Genome Sequencing Center	SAMN02415621	GCA_000155855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/855/GCA_000155855.1_ASM15585v1	-	ATCC 43243
Bacteroides eggerthii DSM 20697	483216	PRJNA27827	27827	FCB group	Bacteroidetes/Chlorobi group	4.19764	44.6	-	ABVO01	20	3488	3344	10/2/08	5/18/17	Scaffold	Washington University Genome Sequencing Center	SAMN00000667	GCA_000155815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/815/GCA_000155815.1_ASM15581v1	-	DSM 20697
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11166	67.7	chromosome:NZ_CP013865.1/CP013865.1	-	1	3978	3638	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383601	GCA_001988515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/515/GCA_001988515.1_ASM198851v1	28167525	J305
Bacteroides plebeius DSM 17135	484018	PRJNA27829	27829	FCB group	Bacteroidetes/Chlorobi group	4.42192	44.3	-	ABQC02	19	3766	3591	6/5/08	5/18/17	Scaffold	Washington University Genome Sequencing Center	SAMN00000028	GCA_000187895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/895/GCA_000187895.1_ASM18789v1	-	DSM 17135
Catonella morbi ATCC 51271	592026	PRJNA33121	33121	Terrabacteria group	Firmicutes	3.4792	37.1	-	ACIL03	8	3154	2990	3/17/09	4/17/17	Scaffold	Washington University Genome Sequencing Center	SAMN02436865	GCA_000160035.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/035/GCA_000160035.2_ASM16003v2	-	ATCC 51271
Acetomicrobium hydrogeniformans ATCC BAA-1850	592015	PRJNA33123	33123	Synergistetes	Synergistia	2.12392	46.5	-	ACJX03	8	2120	2034	4/2/09	4/16/17	Contig	WUGSC	SAMN00009040	GCA_000160455.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/455/GCA_000160455.2_ASM16045v2	-	ATCC BAA-1850
Dialister invisus DSM 15470	592028	PRJNA33143	33143	Terrabacteria group	Firmicutes	1.89596	45.5	-	ACIM02	1	1829	1742	3/17/09	4/17/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008820	GCA_000160055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/055/GCA_000160055.1_ASM16005v1	-	DSM 15470
Kingella oralis ATCC 51147	629741	PRJNA33145	33145	Proteobacteria	Betaproteobacteria	2.40667	54.3	-	ACJW02	5	2483	2351	4/2/09	4/7/17	Scaffold	WUGSC	SAMN00008832	GCA_000160435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/435/GCA_000160435.1_ASM16043v1	-	ATCC 51147
Alloprevotella tannerae ATCC 51259	626522	PRJNA33153	33153	FCB group	Bacteroidetes/Chlorobi group	2.58572	46.5	-	ACIJ02	6	2258	2102	3/17/09	4/17/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008849	GCA_000159995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/995/GCA_000159995.1_ASM15999v1	-	ATCC 51259
Shuttleworthia satelles DSM 14600	626523	PRJNA33169	33169	Terrabacteria group	Firmicutes	2.16948	51.3	-	ACIP02	5	1981	1871	3/17/09	4/17/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008860	GCA_000160115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/115/GCA_000160115.1_ASM16011v1	-	DSM 14600
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10324	67.7	chromosome:NZ_CP013866.1/CP013866.1	-	1	3971	3625	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383602	GCA_001988535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/535/GCA_001988535.1_ASM198853v1	28167525	J311
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1044	67.7	chromosome:NZ_CP013868.1/CP013868.1	-	1	3965	3620	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383559	GCA_001988555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/555/GCA_001988555.1_ASM198855v1	28167525	C975
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10428	67.7	chromosome:NZ_CP013869.1/CP013869.1	-	1	3969	3615	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383560	GCA_001988575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/575/GCA_001988575.1_ASM198857v1	28167525	E368
Lactobacillus ultunensis DSM 16047	525365	PRJNA31505	31505	Terrabacteria group	Firmicutes	2.24841	36.4	-	ACGU01	48	2120	1962	2/19/09	4/7/17	Scaffold	BCM	SAMN00001484	GCA_000159415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/415/GCA_000159415.1_ASM15941v1	-	DSM 16047
Porphyromonas uenonis DSM 23387 = JCM 13868	1122976	PRJNA200603	200603	FCB group	Bacteroidetes/Chlorobi group	2.25441	52.7	-	AXVC01	29	1839	1729	10/25/13	4/10/17	Scaffold	DOE Joint Genome Institute	SAMN02440769	GCA_000482365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/365/GCA_000482365.1_ASM48236v1	-	DSM 23387
Mobiluncus mulieris ATCC 35243	585199	PRJNA34633	34633	Terrabacteria group	Actinobacteria	2.43517	55	-	ACKW01	15	2201	2087	4/27/09	4/7/17	Scaffold	Baylor College of Medicine	SAMN00139192	GCA_000160615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/615/GCA_000160615.1_ASM16061v1	-	ATCC 35243
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10117	67.7	chromosome:NZ_CP013870.1/CP013870.1	-	1	3962	3622	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383561	GCA_001988595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/595/GCA_001988595.1_ASM198859v1	28167525	F501
Abiotrophia defectiva ATCC 49176	592010	PRJNA33011	33011	Terrabacteria group	Firmicutes	2.04344	47	-	ACIN03	4	1967	1833	3/17/09	4/17/17	Scaffold	Washington University Genome Sequencing Center	SAMN02436801	GCA_000160075.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/075/GCA_000160075.2_ASM16007v2	-	ATCC 49176
Prevotella bivia DSM 20514	868129	PRJNA50753	50753	FCB group	Bacteroidetes/Chlorobi group	2.52124	39.9	-	AJVZ01	3	2212	2061	5/8/12	3/30/17	Scaffold	JGI	SAMN02261368	GCA_000262545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/545/GCA_000262545.1_ASM26254v1	-	DSM 20514
Peptostreptococcus anaerobius VPI 4330 = DSM 2949	1035196	PRJNA183057	183057	Terrabacteria group	Firmicutes	2.10694	35.7	-	ARMA01	68	2018	1896	4/23/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441325	GCA_000381525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/525/GCA_000381525.1_ASM38152v1	-	DSM 2949
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10423	67.7	chromosome:NZ_CP013871.1/CP013871.1	-	1	3964	3615	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383562	GCA_001988615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/615/GCA_001988615.1_ASM198861v1	28167525	F657
Peptoniphilus lacrimalis DSM 7455	1122949	PRJNA182433	182433	Terrabacteria group	Firmicutes	1.8492	30.2	-	ARKX01	21	1785	1689	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441667	GCA_000378725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/725/GCA_000378725.1_ASM37872v1	-	DSM 7455
Porphyromonas endodontalis ATCC 35406	553175	PRJNA31385	31385	FCB group	Bacteroidetes/Chlorobi group	2.06451	47.5	-	ACNN01	37	1783	1703	5/1/09	4/17/17	Contig	J. Craig Venter Institute	SAMN00002247	GCA_000174815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/815/GCA_000174815.1_ASM17481v1	-	ATCC 35406
Capnocytophaga gingivalis ATCC 33624	553178	PRJNA31387	31387	FCB group	Bacteroidetes/Chlorobi group	2.66714	40.5	-	ACLQ01	37	2529	2371	4/29/09	4/7/17	Contig	J. Craig Venter Institute	SAMN00001917	GCA_000174755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/755/GCA_000174755.1_ASM17475v1	-	ATCC 33624
Atopobium vaginae PB189-T1-4	866774	PRJNA51071	51071	Terrabacteria group	Actinobacteria	1.44961	48.7	-	AEDQ01	34	1202	1105	8/10/10	4/7/17	Contig	J. Craig Venter Institute	SAMN00100753	GCA_000179715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/715/GCA_000179715.1_ASM17971v1	-	PB189-T1-4
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.09079	67.7	chromosome:NZ_CP013872.1/CP013872.1	-	1	3957	3616	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383563	GCA_001988635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/635/GCA_001988635.1_ASM198863v1	28167525	F778
Clostridiales bacterium 1_7_47FAA	457421	PRJNA30067	30067	Terrabacteria group	Firmicutes	6.54897	50.1	-	ABQR01	108	5910	5706	8/26/08	5/18/17	Scaffold	Broad Institute	SAMN02463678	GCA_000155435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/435/GCA_000155435.1_ASM15543v1	-	1_7_47FAA
Enhydrobacter aerosaccus	225324	PRJEB19546	376325	Proteobacteria	Alphaproteobacteria	6.76976	64.7	-	FUWJ01	30	6551	6405	3/4/17	5/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745126	GCA_900167455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/455/GCA_900167455.1_IMG-taxon_2582581318_annotated_assembly	-	ATCC 27094
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10535	67.7	chromosome:NZ_CP013873.1/CP013873.1	-	1	3965	3623	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383564	GCA_001988655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/655/GCA_001988655.1_ASM198865v1	28167525	F934
[Clostridium asparagiforme] DSM 15981	518636	PRJNA29263	29263	Terrabacteria group	Firmicutes	6.41733	55.3	-	ACCJ01	92	5910	5252	2/23/09	5/18/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008804	GCA_000158075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/075/GCA_000158075.1_ASM15807v1	-	DSM 15981
Holdemanella biformis DSM 3989	518637	PRJNA29269	29269	Terrabacteria group	Firmicutes	2.51776	34.4	-	ABYT01	44	2418	2261	10/30/08	4/17/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008825	GCA_000156655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/655/GCA_000156655.1_ASM15665v1	-	DSM 3989
Providencia alcalifaciens Dmel2	1141661	PRJNA82571	82571	Proteobacteria	Gammaproteobacteria	4.21889	41.7859	plasmid pPALC1:NZ_AKKM01000049.1/AKKM01000049.1	AKKM01	15	3945	3755	11/13/12	4/1/17	Scaffold	Cornell University	SAMN02428991	GCA_000314875.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/875/GCA_000314875.2_ASM31487v2	23145767	Dmel2
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10638	67.7	chromosome:NZ_CP013874.1/CP013874.1	-	1	3970	3624	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383565	GCA_001988675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/675/GCA_001988675.1_ASM198867v1	28167525	G085
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1022	67.7	chromosome:NZ_CP013875.1/CP013875.1	-	1	3969	3630	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383566	GCA_001988695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/695/GCA_001988695.1_ASM198869v1	28167525	G807
Collinsella intestinalis DSM 13280	521003	PRJNA29307	29307	Terrabacteria group	Actinobacteria	1.8095	62.4	-	ABXH02	3	1630	1518	10/2/08	4/17/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008813	GCA_000156175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/175/GCA_000156175.1_ASM15617v1	-	DSM 13280
[Clostridium] hylemonae DSM 15053	553973	PRJNA30369	30369	Terrabacteria group	Firmicutes	3.88986	48.8	-	ABYI02	123	3617	3475	10/23/08	4/17/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008808	GCA_000156515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/515/GCA_000156515.1_ASM15651v1	-	DSM 15053
Bacteroides coprophilus DSM 18228 = JCM 13818	547042	PRJNA30371	30371	FCB group	Bacteroidetes/Chlorobi group	4.0415	45.8	-	ACBW01	73	3426	3157	1/22/09	4/7/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008769	GCA_000157915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/915/GCA_000157915.1_ASM15791v1	-	DSM 18228
Pyramidobacter piscolens W5455	352165	PRJNA34581	34581	Synergistetes	Synergistia	2.56201	59.8	-	ADFP01	140	2427	2282	12/30/09	4/17/17	Contig	J. Craig Venter Institute	SAMN00002506	GCA_000177335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/335/GCA_000177335.1_ASM17733v1	-	W5455
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10534	67.7	chromosome:NZ_CP013876.1/CP013876.1	-	1	3968	3623	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383567	GCA_001988715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/715/GCA_001988715.1_ASM198871v1	28167525	G965
Neisseria flavescens NRL30031/H210	546264	PRJNA30473	30473	Proteobacteria	Betaproteobacteria	2.20559	49.2	-	ACEN01	117	2217	1989	2/3/09	4/7/17	Contig	Washington University Genome Sequencing Center	SAMN00008839	GCA_000173935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/935/GCA_000173935.1_ASM17393v1	-	NRL30031/H210
Staphylococcus caprae M23864:W1	525378	PRJNA34647	34647	Terrabacteria group	Firmicutes	2.62957	33.5	-	ACJB01	26	2517	2398	3/16/09	4/7/17	Scaffold	Baylor College of Medicine	SAMN00002222	GCA_000160215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/215/GCA_000160215.1_ASM16021v1	-	M23864:W1
Neisseria mucosa C102	435832	PRJNA38747	38747	Proteobacteria	Betaproteobacteria	2.16944	49.6	-	ACRG01	7	2115	1992	1/11/11	4/7/17	Scaffold	Broad Institute	SAMN02463751	GCA_000186165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/165/GCA_000186165.1_Neis_muco_C102_V1	-	C102
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10638	67.7	chromosome:NZ_CP013877.1/CP013877.1	-	1	3972	3622	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383568	GCA_001988735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/735/GCA_001988735.1_ASM198873v1	28167525	H348
Neisseria subflava NJ9703	546268	PRJNA30483	30483	Proteobacteria	Betaproteobacteria	2.29299	49	-	ACEO02	63	2272	2078	2/3/09	4/17/17	Contig	Washington University Genome Sequencing Center	SAMN00008843	GCA_000173955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/955/GCA_000173955.1_ASM17395v1	-	NJ9703
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10743	67.7	chromosome:NZ_CP013878.1/CP013878.1	-	1	3970	3626	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383569	GCA_001988755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/755/GCA_001988755.1_ASM198875v1	28167525	H361
Weissella paramesenteroides ATCC 33313	585506	PRJNA34661	34661	Terrabacteria group	Firmicutes	1.98022	38	-	ACKU01	13	1953	1866	4/20/09	4/7/17	Scaffold	Baylor College of Medicine	SAMN00139194	GCA_000160575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/575/GCA_000160575.1_ASM16057v1	-	ATCC 33313
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10828	67.7	chromosome:NZ_CP013879.1/CP013879.1	-	1	3974	3629	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383570	GCA_001988775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/775/GCA_001988775.1_ASM198877v1	28167525	H533
Staphylococcus hominis subsp. hominis C80	435837	PRJNA38759	38759	Terrabacteria group	Firmicutes	2.2684	31.4	-	ACRM01	15	2280	2143	11/30/10	3/30/17	Scaffold	Broad Institute	SAMN02463757	GCA_000183685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/685/GCA_000183685.1_ASM18368v1	-	C80
Neisseria polysaccharea ATCC 43768	546267	PRJNA30479	30479	Proteobacteria	Betaproteobacteria	2.03096	52	-	ADBE01	139	2289	1922	11/9/09	4/7/17	Contig	Washington University Genome Sequencing Center	SAMN00008844	GCA_000176735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/735/GCA_000176735.1_ASM17673v1	-	ATCC 43768
Leptotrichia goodfellowii DSM 19756	714315	PRJNA43669	43669	Fusobacteria	Fusobacteriia	2.28116	31.6	-	AZXW01	1	2207	2065	1/3/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02597279	GCA_000516535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/535/GCA_000516535.1_ASM51653v1	-	DSM 19756
Treponema vincentii F0403	1125702	PRJNA169493	169493	Spirochaetes	Spirochaetia	2.69349	45.5	-	ATFC01	3	2489	2358	6/19/13	4/8/17	Scaffold	Broad Institute	SAMN02596984	GCA_000412995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/995/GCA_000412995.1_Trep_vinc_F0403_V1	-	F0403
Corynebacterium matruchotii ATCC 14266	553207	PRJNA31011	31011	Terrabacteria group	Actinobacteria	2.85599	57.1	-	ACSH02	8	2568	2488	7/8/09	4/7/17	Contig	J. Craig Venter Institute	SAMN00001942	GCA_000175375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/375/GCA_000175375.1_ASM17537v1	-	ATCC 14266
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10529	67.7	chromosome:NZ_CP013880.1/CP013880.1	-	1	3972	3625	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383571	GCA_001988795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/795/GCA_001988795.1_ASM198879v1	28167525	H540
Atopobium rimae ATCC 49626	553184	PRJNA30999	30999	Terrabacteria group	Actinobacteria	1.62629	49.3	-	ACFE01	9	1523	1458	1/22/09	4/7/17	Contig	J. Craig Venter Institute	SAMN00000717	GCA_000174015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/015/GCA_000174015.1_ASM17401v1	-	ATCC 49626
Propionibacterium acidifaciens DSM 21887	1122994	PRJNA195803	195803	Terrabacteria group	Actinobacteria	3.0439	70.6	-	AUFR01	85	2589	2402	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441526	GCA_000426605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/605/GCA_000426605.1_ASM42660v1	-	DSM 21887
Corynebacterium amycolatum SK46	553204	PRJNA31007	31007	Terrabacteria group	Actinobacteria	2.51391	58.6	-	ABZU01	48	2179	2090	11/21/08	4/7/17	Contig	J. Craig Venter Institute	SAMN00000714	GCA_000173655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/655/GCA_000173655.1_ASM17365v1	-	SK46
Corynebacterium tuberculostearicum SK141	553206	PRJNA31009	31009	Terrabacteria group	Actinobacteria	2.37226	60	-	ACVP01	37	2269	2180	8/5/09	4/17/17	Contig	J. Craig Venter Institute	SAMN00000719	GCA_000175635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/635/GCA_000175635.1_ASM17563v1	-	SK141
Lactobacillus antri DSM 16041	525309	PRJNA31479	31479	Terrabacteria group	Firmicutes	2.3029	51	-	ACLL01	20	2170	2033	4/27/09	4/7/17	Scaffold	Baylor College of Medicine	SAMN00001477	GCA_000160835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/835/GCA_000160835.1_ASM16083v1	-	DSM 16041
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10534	67.7	chromosome:NZ_CP013881.1/CP013881.1	-	1	3968	3624	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383572	GCA_001988815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/815/GCA_001988815.1_ASM198881v1	28167525	H636
Mycobacterium parascrofulaceum ATCC BAA-614	525368	PRJNA31521	31521	Terrabacteria group	Actinobacteria	6.56417	67.6	-	ADNV01	124	6139	5658	5/10/10	5/19/17	Scaffold	Baylor College of Medicine	SAMN00189881	GCA_000164135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/135/GCA_000164135.1_ASM16413v1	-	ATCC BAA-614
Corynebacterium glucuronolyticum	39791	PRJEB20246	381568	Terrabacteria group	Actinobacteria	2.82107	59.1	-	FWWS01	41	2572	2425	4/6/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660745	GCA_900176155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/155/GCA_900176155.1_IMG-taxon_2529292557_annotated_assembly	-	DSM 44120
Holdemania filiformis DSM 12042	545696	PRJNA30361	30361	Terrabacteria group	Firmicutes	3.93292	50.1	-	ACCF01	35	3655	3373	2/23/09	4/17/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008830	GCA_000157995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/995/GCA_000157995.1_ASM15799v1	-	DSM 12042
Actinomyces coleocanis DSM 15436	525245	PRJNA31427	31427	Terrabacteria group	Actinobacteria	1.72384	49.6	-	ACFG01	35	1533	1462	1/23/09	4/17/17	Scaffold	Baylor College of Medicine	SAMN00001853	GCA_000159015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/015/GCA_000159015.1_ASM15901v1	-	DSM 15436
Actinomyces urogenitalis DSM 15434	525246	PRJNA31429	31429	Terrabacteria group	Actinobacteria	2.70281	68	-	ACFH01	67	2290	2083	1/23/09	4/7/17	Scaffold	Baylor College of Medicine	SAMN00002545	GCA_000159035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/035/GCA_000159035.1_ASM15903v1	-	DSM 15434
Providencia rustigianii DSM 4541	500637	PRJNA28651	28651	Proteobacteria	Gammaproteobacteria	3.97864	41.2	-	ABXV02	35	3821	3570	10/23/08	4/17/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008855	GCA_000156395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/395/GCA_000156395.1_ASM15639v1	-	DSM 4541
Enterobacter cancerogenus ATCC 35316	500639	PRJNA28663	28663	Proteobacteria	Gammaproteobacteria	4.63865	55.9	-	ABWM02	10	4486	4283	10/1/08	4/10/17	Scaffold	Washington University Genome Sequencing Center	SAMN00000733	GCA_000155995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/995/GCA_000155995.1_ASM15599v1	-	ATCC 35316
Mitsuokella multacida DSM 20544	500635	PRJNA28653	28653	Terrabacteria group	Firmicutes	2.57706	58	-	ABWK02	6	2415	2289	10/1/08	4/17/17	Scaffold	Washington University Genome Sequencing Center	SAMN00000736	GCA_000155955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/955/GCA_000155955.1_ASM15595v1	-	DSM 20544
[Clostridium] hiranonis DSM 13275	500633	PRJNA28657	28657	Terrabacteria group	Firmicutes	2.47977	31.4	-	ABWP01	26	2196	2139	10/1/08	4/17/17	Scaffold	Washington University Genome Sequencing Center	SAMN00000729	GCA_000156055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/055/GCA_000156055.1_ASM15605v1	-	DSM 13275
Tyzzerella nexilis DSM 1787	500632	PRJNA28659	28659	Terrabacteria group	Firmicutes	3.99563	40.3	-	ABWO01	99	3904	3512	10/1/08	4/17/17	Scaffold	Washington University Genome Sequencing Center	SAMN00000730	GCA_000156035.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/035/GCA_000156035.2_ASM15603v2	-	DSM 1787
Roseburia intestinalis L1-82	536231	PRJNA30005	30005	Terrabacteria group	Firmicutes	4.41137	42.6	-	ABYJ02	102	4316	3755	10/23/08	5/19/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008856	GCA_000156535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/535/GCA_000156535.1_ASM15653v1	-	L1-82
Lactobacillus hilgardii DSM 20176 = ATCC 8290	1423757	PRJNA31489	31489	Terrabacteria group	Firmicutes	2.72104	39.9	-	ACGP01	113	2579	2363	2/19/09	4/7/17	Scaffold	Baylor College of Medicine	SAMN00001467	GCA_000159315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/315/GCA_000159315.1_ASM15931v1	-	ATCC 8290
Anaerococcus tetradius ATCC 35098	525255	PRJNA31433	31433	Terrabacteria group	Firmicutes	2.14535	34.4	-	ACGC01	100	2017	1899	2/12/09	4/7/17	Scaffold	Baylor College of Medicine	SAMN00001448	GCA_000159095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/095/GCA_000159095.1_ASM15909v1	-	ATCC 35098
Gemella sanguinis ATCC 700632	1408440	PRJNA223062	223062	Terrabacteria group	Firmicutes	1.79549	29.6	-	JNJO01	27	1745	1633	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841211	GCA_000701685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/685/GCA_000701685.1_ASM70168v1	-	ATCC 700632
Parabacteroides johnsonii CL02T12C29	999419	PRJNA64889	64889	FCB group	Bacteroidetes/Chlorobi group	4.62906	45.1	-	AGZP01	6	3821	3652	10/19/12	6/12/17	Scaffold	Broad Institute	SAMN02463940	GCA_000307375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/375/GCA_000307375.1_Para_john_CL02T12C29_V1	-	CL02T12C29
Blautia hansenii DSM 20583	537007	PRJNA30021	30021	Terrabacteria group	Firmicutes	3.05872	39	-	ABYU02	8	3068	2871	10/30/08	4/7/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008797	GCA_000156675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/675/GCA_000156675.1_ASM15667v1	-	DSM 20583
Prevotella copri DSM 18205	537011	PRJNA30025	30025	FCB group	Bacteroidetes/Chlorobi group	3.51247	44.8	-	ACBX02	27	2995	2807	1/22/09	4/10/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008847	GCA_000157935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/935/GCA_000157935.1_ASM15793v1	-	DSM 18205
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10535	67.7	chromosome:NZ_CP013882.1/CP013882.1	-	1	3967	3623	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383573	GCA_001988835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/835/GCA_001988835.1_ASM198883v1	28167525	H876
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10153	67.7	chromosome:NZ_CP013883.1/CP013883.1	-	1	3968	3600	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383574	GCA_001988855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/855/GCA_001988855.1_ASM198885v1	28167525	I093
[Clostridium] methylpentosum DSM 5476	537013	PRJNA30029	30029	Terrabacteria group	Firmicutes	3.47842	51.7	-	ACEC01	17	2941	2754	2/4/09	4/17/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008812	GCA_000158655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/655/GCA_000158655.1_ASM15865v1	-	DSM 5476
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11375	67.7	chromosome:NZ_CP013884.1/CP013884.1	-	1	3977	3624	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383575	GCA_001988875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/875/GCA_001988875.1_ASM198887v1	28167525	J093
Campylobacter rectus RM3267	553218	PRJNA31017	31017	Proteobacteria	delta/epsilon subdivisions	2.51311	44.8	-	ACFU01	89	2491	2254	2/6/09	4/7/17	Contig	J. Craig Venter Institute	SAMN00000716	GCA_000174175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/175/GCA_000174175.1_ASM17417v1	-	RM3267
Campylobacter showae CSUNSWCD	1244083	PRJNA177777	177777	Proteobacteria	delta/epsilon subdivisions	2.12517	45.1	-	AMZQ01	23	2167	2057	11/19/12	4/8/17	Contig	University of New South Wales	SAMN01806160	GCA_000313615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/615/GCA_000313615.1_Velvet_assembly_of_Campylobacter_showae_CSUNSWCD	23409253	CSUNSWCD
Gemella haemolysans ATCC 10379	546270	PRJNA30487	30487	Terrabacteria group	Firmicutes	1.91619	30.9	-	ACDZ02	15	1744	1628	2/4/09	4/7/17	Contig	Human Microbiome Project	SAMN00000721	GCA_000173915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/915/GCA_000173915.1_ASM17391v1	-	ATCC 10379
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10742	67.7	chromosome:NZ_CP013885.1/CP013885.1	-	1	3973	3617	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383576	GCA_001988895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/895/GCA_001988895.1_ASM198889v1	28167525	J097
Chryseobacterium gleum ATCC 35910	525257	PRJNA30953	30953	FCB group	Bacteroidetes/Chlorobi group	5.57064	36.8	-	ACKQ02	5	5137	5008	4/20/09	5/18/17	Scaffold	Baylor College of Medicine	SAMN00000627	GCA_000143785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/143/785/GCA_000143785.1_ASM14378v1	-	ATCC 35910
Corynebacterium pseudogenitalium ATCC 33035	525264	PRJNA30955	30955	Terrabacteria group	Actinobacteria	2.60143	59.5	-	ABYQ02	9	2497	2368	10/23/08	4/17/17	Scaffold	Baylor College of Medicine	SAMN00000628	GCA_000156615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/615/GCA_000156615.2_ASM15661v2	-	ATCC 33035
Neisseria cinerea ATCC 14685	546262	PRJNA30469	30469	Proteobacteria	Betaproteobacteria	1.87277	50.8	-	ACDY02	35	1908	1721	2/4/09	4/7/17	Contig	Washington University Genome Sequencing Center	SAMN00008837	GCA_000173895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/895/GCA_000173895.1_ASM17389v1	-	ATCC 14685
Dorea formicigenerans ATCC 27755	411461	PRJNA18155	18155	Terrabacteria group	Firmicutes	3.18603	41	-	AAXA02	16	3119	2954	10/3/07	4/7/17	Contig	Washington University Genome Sequencing Center	SAMN00000008	GCA_000169235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/235/GCA_000169235.1_ASM16923v1	-	ATCC 27755
Peptostreptococcus stomatis DSM 17678	596315	PRJNA34073	34073	Terrabacteria group	Firmicutes	1.98804	36.7	-	ADGQ01	74	1814	1728	9/9/10	4/17/17	Contig	J. Craig Venter Institute	SAMN00008344	GCA_000147675.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/675/GCA_000147675.2_ASM14767v1	-	DSM 17678
Acinetobacter radioresistens DSM 6976 = NBRC 102413 = CIP 103788	981334	PRJNA183277	183277	Proteobacteria	Gammaproteobacteria	3.19549	41.7	-	APQF01	13	3008	2878	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN01087835	GCA_000368905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/905/GCA_000368905.1_Acin_radi_CIP_103788_V1	-	CIP 103788
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11268	67.7	chromosome:NZ_CP013886.1/CP013886.1	-	1	3979	3619	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383577	GCA_001988915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/915/GCA_001988915.1_ASM198891v1	28167525	J099
Eikenella corrodens ATCC 23834	546274	PRJNA30493	30493	Proteobacteria	Betaproteobacteria	2.17124	55.7	-	ACEA01	12	2121	2016	2/4/09	3/30/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008822	GCA_000158615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/615/GCA_000158615.1_ASM15861v1	-	ATCC 23834
Anaerococcus lactolyticus ATCC 51172	525254	PRJNA30951	30951	Terrabacteria group	Firmicutes	2.20668	35.1	-	ABYO01	251	2088	1966	10/23/08	4/7/17	Scaffold	Baylor College of Medicine	SAMN00000626	GCA_000156575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/575/GCA_000156575.1_ASM15657v1	-	ATCC 51172
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10742	67.7	chromosome:NZ_CP013887.1/CP013887.1	-	1	3976	3619	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383578	GCA_001988995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/995/GCA_001988995.1_ASM198899v1	28167525	J103
Veillonella dispar ATCC 17748	546273	PRJNA30491	30491	Terrabacteria group	Firmicutes	2.11877	38.9	-	ACIK02	3	1990	1903	3/17/09	4/7/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008863	GCA_000160015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/015/GCA_000160015.1_ASM16001v1	-	ATCC 17748
Corynebacterium accolens ATCC 49725	525260	PRJNA31443	31443	Terrabacteria group	Actinobacteria	2.43719	59.5	-	ACGD01	38	2275	2162	2/12/09	4/7/17	Scaffold	Baylor College of Medicine	SAMN00002226	GCA_000159115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/115/GCA_000159115.1_ASM15911v1	-	ATCC 49725
Corynebacterium lipophiloflavum DSM 44291	525263	PRJNA31447	31447	Terrabacteria group	Actinobacteria	2.38578	64.2	-	ACHJ01	77	2270	2085	3/10/09	4/17/17	Scaffold	Baylor College of Medicine	SAMN00001476	GCA_000159635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/635/GCA_000159635.1_ASM15963v1	-	DSM 44291
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10848	67.7	chromosome:NZ_CP013888.1/CP013888.1	-	1	3975	3625	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383579	GCA_001989015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/015/GCA_001989015.1_ASM198901v1	28167525	J104
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10952	67.7	chromosome:NZ_CP013890.1/CP013890.1	-	1	3976	3630	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383581	GCA_001989035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/035/GCA_001989035.1_ASM198903v1	28167525	J120
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10308	67.7	chromosome:NZ_CP013891.1/CP013891.1	-	1	3968	3622	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383582	GCA_001989055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/055/GCA_001989055.1_ASM198905v1	28167525	J121
Hungatella hathewayi DSM 13479	566550	PRJNA30755	30755	Terrabacteria group	Firmicutes	7.16388	48.1	-	ACIO01	714	6573	5534	5/1/09	5/18/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008805	GCA_000160095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/095/GCA_000160095.1_ASM16009v1	-	DSM 13479
Roseburia inulinivorans DSM 16841	622312	PRJNA30757	30757	Terrabacteria group	Firmicutes	4.04846	41.9	-	ACFY01	179	3954	3559	3/12/09	4/7/17	Contig	Washington University Genome Sequencing Center	SAMN00008857	GCA_000174195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/195/GCA_000174195.1_ASM17419v1	-	DSM 16841
Bifidobacterium gallicum DSM 20093 = LMG 11596	561180	PRJNA239846	239846	Terrabacteria group	Actinobacteria	2.00459	57.6	-	JGYW01	12	1593	1487	8/18/14	4/9/17	Contig	University of Parma	SAMN02673434	GCA_000741205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/205/GCA_000741205.1_Bifgalcum	"2,508,549,325,107,960"	LMG 11596
Anaerococcus hydrogenalis	33029	PRJNA272116	272116	Terrabacteria group	Firmicutes	2.42715	31.8	-	LRPL01	402	2411	2174	2/2/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN03842090	GCA_001546155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/155/GCA_001546155.1_ASM154615v1	-	MJR7738A
Oxalobacter formigenes HOxBLS	556268	PRJNA32497	32497	Proteobacteria	Betaproteobacteria	2.48839	52.7	-	ACDP02	2	2591	2455	3/2/09	4/9/17	Scaffold	Broad Institute	SAMN02463716	GCA_000158475.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/475/GCA_000158475.2_Oxal_for_HOxBLS_2_V2	-	HOxBLS
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1076	67.7	chromosome:NZ_CP013892.1/CP013892.1	-	1	3976	3619	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383583	GCA_001989075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/075/GCA_001989075.1_ASM198907v1	28167525	J122
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10761	67.7	chromosome:NZ_CP013893.1/CP013893.1	-	1	3976	3619	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383584	GCA_001989095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/095/GCA_001989095.1_ASM198909v1	28167525	J124
Butyrivibrio crossotus DSM 2876	511680	PRJNA28999	28999	Terrabacteria group	Firmicutes	2.49604	37.8	-	ABWN01	31	2472	2339	4/2/09	4/7/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008799	GCA_000156015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/015/GCA_000156015.1_ASM15601v1	-	DSM 2876
Fusobacterium ulcerans ATCC 49185	469617	PRJNA32487	32487	Fusobacteria	Fusobacteriia	3.4875	30.4	-	ACDH02	8	3279	3113	3/2/09	4/8/17	Scaffold	Broad Institute	SAMN02463713	GCA_000158315.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/315/GCA_000158315.2_Fuso_ulc_ATCC49185_V2	-	ATCC 49185
Helicobacter winghamensis ATCC BAA-430	556267	PRJNA32491	32491	Proteobacteria	delta/epsilon subdivisions	1.69022	35.8	-	ACDO01	21	1693	1595	3/9/09	4/17/17	Scaffold	Broad Institute	SAMN02463715	GCA_000158455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/455/GCA_000158455.1_ASM15845v1	25212613	ATCC BAA-430
Fusobacterium gonidiaformans 3-1-5R	469605	PRJNA32477	32477	Fusobacteria	Fusobacteriia	1.93043	32.9	-	ACDD01	28	1909	1801	3/2/09	4/7/17	Scaffold	Broad Institute	SAMN02463709	GCA_000158235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/235/GCA_000158235.1_ASM15823v1	-	3_1_5R
Fusobacterium mortiferum ATCC 9817	469616	PRJNA32421	32421	Fusobacteria	Fusobacteriia	2.67104	29.1	-	ACDB02	8	2668	2503	3/2/09	4/7/17	Scaffold	Broad Institute	SAMN02463687	GCA_000158195.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/195/GCA_000158195.2_Fuso_mor_ATCC9817_V2	-	ATCC 9817
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10564	67.7	chromosome:NZ_CP013894.1/CP013894.1	-	1	3972	3631	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383585	GCA_001989115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/115/GCA_001989115.1_ASM198911v1	28167525	J149
Lactobacillus iners DSM 13335	525328	PRJNA31491	31491	Terrabacteria group	Firmicutes	1.27765	32.6	-	ACLN01	12	1227	1167	4/27/09	3/30/17	Scaffold	BCM	SAMN00139432	GCA_000160875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/875/GCA_000160875.1_ASM16087v1	-	DSM 13335
Roseomonas cervicalis ATCC 49957	525371	PRJNA31527	31527	Proteobacteria	Alphaproteobacteria	5.10098	69	-	ADVL01	498	4397	3821	5/18/10	5/19/17	Scaffold	BCM	SAMN00001496	GCA_000164635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/635/GCA_000164635.1_ASM16463v1	-	ATCC 49957
Sphingobacterium spiritivorum ATCC 33861	525373	PRJNA31531	31531	FCB group	Bacteroidetes/Chlorobi group	5.09351	39.8	-	ACHA02	11	4370	4253	2/20/09	5/19/17	Scaffold	BCM	SAMN00001488	GCA_000143765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/143/765/GCA_000143765.1_ASM14376v1	-	ATCC 33861
Lactobacillus vaginalis DSM 5837 = ATCC 49540	1423814	PRJNA31507	31507	Terrabacteria group	Firmicutes	1.87733	40.9	-	ACGV01	112	1788	1656	2/19/09	4/7/17	Scaffold	BCM	SAMN00001485	GCA_000159435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/435/GCA_000159435.1_ASM15943v1	-	ATCC 49540
Aeromicrobium marinum DSM 15272	585531	PRJNA34545	34545	Terrabacteria group	Actinobacteria	3.07984	71.1	chromosome:NZ_CM001024.1/CM001024.1	ACLF03	1	6244	6103	4/27/09	4/17/17	Chromosome	Baylor College of Medicine	SAMN00139180	GCA_000160775.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/775/GCA_000160775.2_ASM16077v2	-	DSM 15272
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10638	67.7	chromosome:NZ_CP013896.1/CP013896.1	-	1	3975	3623	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383587	GCA_001989135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/135/GCA_001989135.1_ASM198913v1	28167525	J155
Brevibacterium mcbrellneri ATCC 49030	585530	PRJNA34583	34583	Terrabacteria group	Actinobacteria	2.5618	58	-	ADNU01	96	2392	2245	4/20/10	4/17/17	Contig	Baylor College of Medicine	SAMN00139181	GCA_000178455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/455/GCA_000178455.1_ASM17845v1	-	ATCC 49030
Corynebacterium genitalium ATCC 33030	585529	PRJNA34587	34587	Terrabacteria group	Actinobacteria	2.34995	62.7	chromosome:NZ_CM000961.1/CM000961.1	ACLJ02	1	4527	4368	4/27/09	4/17/17	Chromosome	Baylor College of Medicine	SAMN00139184	GCA_000143825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/143/825/GCA_000143825.1_ASM14382v1	-	ATCC 33030
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10744	67.7	chromosome:NZ_CP013897.1/CP013897.1	-	1	3974	3625	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383588	GCA_001989155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/155/GCA_001989155.1_ASM198915v1	28167525	J159
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10638	67.7	chromosome:NZ_CP013898.1/CP013898.1	-	1	3974	3624	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383589	GCA_001989175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/175/GCA_001989175.1_ASM198917v1	28167525	J161
Cardiobacterium hominis ATCC 15826	638300	PRJNA37269	37269	Proteobacteria	Gammaproteobacteria	2.64249	59	-	ACKY01	26	2494	2322	4/20/09	4/7/17	Scaffold	Baylor College of Medicine	SAMN00120585	GCA_000160655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/655/GCA_000160655.1_ASM16065v1	-	ATCC 15826
Granulicatella adiacens ATCC 49175	638301	PRJNA37271	37271	Terrabacteria group	Firmicutes	1.94717	37.8	-	ACKZ01	10	1885	1828	4/20/09	4/17/17	Scaffold	Baylor College of Medicine	SAMN00139322	GCA_000160675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/675/GCA_000160675.1_ASM16067v1	-	ATCC 49175
Selenomonas flueggei ATCC 43531	638302	PRJNA37273	37273	Terrabacteria group	Firmicutes	2.16606	55.9	-	ACLA01	9	2133	2002	4/20/09	4/17/17	Scaffold	Baylor College of Medicine	SAMN00189217	GCA_000160695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/695/GCA_000160695.1_ASM16069v1	-	ATCC 43531
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10218	67.7	chromosome:NZ_CP013899.1/CP013899.1	-	1	3968	3613	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383590	GCA_001989195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/195/GCA_001989195.1_ASM198919v1	28167525	J162
Thalassobium sp. R2A62	633131	PRJNA37677	37677	Proteobacteria	Alphaproteobacteria	3.48793	55.2	-	ACOA01	1	3496	3315	5/12/09	4/17/17	Scaffold	Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436219	GCA_000161835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/835/GCA_000161835.1_ASM16183v1	-	R2A62
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10866	67.7	chromosome:NZ_CP013900.1/CP013900.1	-	1	3976	3622	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383591	GCA_001989215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/215/GCA_001989215.1_ASM198921v1	28167525	J174
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11376	67.7	chromosome:NZ_CP013902.1/CP013902.1	-	1	3978	3635	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383593	GCA_001989235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/235/GCA_001989235.1_ASM198923v1	28167525	J198
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1106	67.7	chromosome:NZ_CP013903.1/CP013903.1	-	1	3978	3637	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383594	GCA_001989255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/255/GCA_001989255.1_ASM198925v1	28167525	J206
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10847	67.7	chromosome:NZ_CP013904.1/CP013904.1	-	1	3979	3627	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383595	GCA_001989275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/275/GCA_001989275.1_ASM198927v1	28167525	J208
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.1106	67.7	chromosome:NZ_CP013905.1/CP013905.1	-	1	3979	3637	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383596	GCA_001989295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/295/GCA_001989295.1_ASM198929v1	28167525	J210
Silicibacter sp. TrichCH4B	644076	PRJNA37909	37909	Proteobacteria	Alphaproteobacteria	4.68908	58.7	-	ACNZ01	8	4493	4246	5/12/09	5/19/17	Scaffold	Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436261	GCA_000161815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/815/GCA_000161815.1_ASM16181v1	-	TrichCH4B
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10866	67.7	chromosome:NZ_CP013907.1/CP013907.1	-	1	3977	3628	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383598	GCA_001989315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/315/GCA_001989315.1_ASM198931v1	28167525	J277
Prevotella bergensis DSM 17361	585502	PRJNA34637	34637	FCB group	Bacteroidetes/Chlorobi group	3.27367	47.6	-	ACKS01	30	2628	2465	4/20/09	4/17/17	Scaffold	Baylor College of Medicine	SAMN00139193	GCA_000160535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/535/GCA_000160535.1_ASM16053v1	-	DSM 17361
Selenomonas noxia ATCC 43541	585503	PRJNA34641	34641	Terrabacteria group	Firmicutes	2.05499	55.8	-	ACKT01	21	1983	1876	4/20/09	4/7/17	Scaffold	Baylor College of Medicine	SAMN00138948	GCA_000160555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/555/GCA_000160555.1_ASM16055v1	-	ATCC 43541
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10531	67.7	chromosome:NZ_CP013951.1/CP013951.1	-	1	3972	3612	2/6/17	3/29/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04388406	GCA_001989335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/335/GCA_001989335.1_ASM198933v1	28167525	J096
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10636	67.7	chromosome:NZ_CP013889.1/CP013889.1	-	1	3973	3619	2/6/17	3/8/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383580	GCA_002018515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/515/GCA_002018515.1_ASM201851v1	28167525	J105
Ruminococcus flavefaciens ATCC 19208	1336236	PRJNA204092	204092	Terrabacteria group	Firmicutes	3.5878	43.2	-	JAEF01	25	3130	2983	1/10/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02584965	GCA_000518765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/765/GCA_000518765.1_ASM51876v1	-	ATCC 19208
Silicibacter lacuscaerulensis ITI-1157	644107	PRJNA37681	37681	Proteobacteria	Alphaproteobacteria	3.52371	62.9	-	ACNX01	2	3521	3339	5/12/09	4/7/17	Scaffold	Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436218	GCA_000161775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/775/GCA_000161775.1_ASM16177v1	-	ITI-1157
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.11059	67.7	chromosome:NZ_CP013895.1/CP013895.1	-	1	3976	3626	2/6/17	3/24/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383586	GCA_002068675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/068/675/GCA_002068675.1_ASM206867v1	28167525	J152
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10639	67.7	chromosome:NZ_CP013901.1/CP013901.1	-	1	3975	3629	2/6/17	3/24/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383592	GCA_002068975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/068/975/GCA_002068975.1_ASM206897v1	28167525	J175
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10848	67.7	chromosome:NZ_CP013906.1/CP013906.1	-	1	3977	3627	2/6/17	3/24/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04383597	GCA_002069155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/069/155/GCA_002069155.1_ASM206915v1	28167525	J276
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.12898	67.7	chromosome:NZ_CP017402.1/CP017402.1	-	1	3992	3641	10/24/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05770313	GCA_001831395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/395/GCA_001831395.1_ASM183139v1	28007855	J445
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.14037	67.7	chromosome:NZ_CP017403.1/CP017403.1	-	1	3989	3630	10/24/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05770314	GCA_001831415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/415/GCA_001831415.1_ASM183141v1	28007855	J446
Xanthomonas translucens pv. translucens DSM 18974	1261556	PRJEB647	182302	Proteobacteria	Gammaproteobacteria	4.71536	67.7	chromosome I:NZ_LT604072.1/LT604072.1	-	1	4024	3761	8/2/16	4/5/17	Complete Genome	"CeBiTec, Bielefeld University"	SAMEA4358958	GCA_900094325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/325/GCA_900094325.1_PBasm1	-	-
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.13464	67.7	chromosome:NZ_CP012128.1/CP012128.1	-	1	3983	3631	7/19/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03877216	GCA_001687385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/385/GCA_001687385.1_ASM168738v1	"2,763,500,128,167,520"	B203
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.12898	67.7	chromosome:NZ_CP016338.1/CP016338.1	-	1	3993	3640	7/19/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05333716	GCA_001687405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/405/GCA_001687405.1_ASM168740v1	27635001	B202
Bordetella pertussis	520	PRJNA321467	321467	Proteobacteria	Betaproteobacteria	4.12722	67.7	chromosome:NZ_CP015761.1/CP015761.1	-	1	3988	3632	7/15/16	3/28/17	Complete Genome	James Madison University	SAMN04867636	GCA_001686365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/365/GCA_001686365.1_ASM168636v1	-	VA-190
Bordetella pertussis	520	PRJNA321467	321467	Proteobacteria	Betaproteobacteria	4.11517	67.7	chromosome:NZ_CP015759.1/CP015759.1	-	1	3982	3622	7/15/16	3/28/17	Complete Genome	James Madison University	SAMN04867637	GCA_001686405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/405/GCA_001686405.1_ASM168640v1	-	VA-194
Ochrobactrum intermedium LMG 3301	641118	PRJNA37725	37725	Proteobacteria	Alphaproteobacteria	4.72539	57.7	-	ACQA01	4	4571	4269	6/11/09	5/19/17	Scaffold	Virginia Bioinformatics Institute	SAMN02472089	GCA_000182645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/182/645/GCA_000182645.1_ASM18264v1	-	LMG 3301
Bordetella pertussis	520	PRJNA321467	321467	Proteobacteria	Betaproteobacteria	4.11	67.7	chromosome:NZ_CP015760.1/CP015760.1	-	1	3978	3625	7/15/16	4/10/17	Complete Genome	James Madison University	SAMN04867635	GCA_001686425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/425/GCA_001686425.1_ASM168642v1	-	VA-175
Mycoplasma conjunctivae	45361	PRJEA32285	32285	Terrabacteria group	Tenericutes	0.846214	28.6	chromosome:NC_012806.1/FM864216.2	-	1	703	657	6/17/09	4/17/17	Chromosome	Swiss Institute of Bioinformatics	SAMEA2272202	GCA_000026765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/765/GCA_000026765.1_ASM2676v1	-	HRC/581T
Bordetella pertussis	520	PRJNA321467	321467	Proteobacteria	Betaproteobacteria	4.11355	67.7	chromosome:NZ_CP015762.1/CP015762.1	-	1	3972	3575	7/15/16	3/28/17	Complete Genome	James Madison University	SAMN04867634	GCA_001686445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/445/GCA_001686445.1_ASM168644v1	-	VA-150
Lactobacillus coleohominis 101-4-CHN	575594	PRJNA37949	37949	Terrabacteria group	Firmicutes	1.72583	41.4	-	ACOH01	12	1712	1581	8/24/09	4/7/17	Scaffold	Broad Institute	SAMN02463725	GCA_000161935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/935/GCA_000161935.1_ASM16193v1	-	101-4-CHN
Bordetella pertussis	520	PRJNA321467	321467	Proteobacteria	Betaproteobacteria	4.12341	67.7	chromosome:NZ_CP015763.1/CP015763.1	-	1	3986	3630	7/15/16	3/28/17	Complete Genome	James Madison University	SAMN04867631	GCA_001686465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/465/GCA_001686465.1_ASM168646v1	-	VA-52
Bordetella pertussis	520	PRJNA321467	321467	Proteobacteria	Betaproteobacteria	4.12871	67.7	chromosome:NZ_CP015764.1/CP015764.1	-	1	3994	3629	7/15/16	3/28/17	Complete Genome	James Madison University	SAMN04867638	GCA_001686485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/485/GCA_001686485.1_ASM168648v1	-	VA-198
Bordetella pertussis	520	PRJNA321467	321467	Proteobacteria	Betaproteobacteria	4.11305	67.7	chromosome:NZ_CP015765.1/CP015765.1	-	1	3975	3631	7/15/16	3/28/17	Complete Genome	James Madison University	SAMN04867627	GCA_001686505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/505/GCA_001686505.1_ASM168650v1	-	VA-09
Anaerococcus vaginalis	33037	PRJEA82013	82013	Terrabacteria group	Firmicutes	2.04943	30.1	-	CAGU01	19	1947	1594	5/30/12	4/8/17	Scaffold	URMITE CNRS UMR 6236 IRD 198	SAMEA2272686	GCA_000307225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/225/GCA_000307225.1_ASM30722v1	-	PH9
Bordetella pertussis	520	PRJNA321467	321467	Proteobacteria	Betaproteobacteria	4.12099	67.7	chromosome:NZ_CP015766.1/CP015766.1	-	1	3979	3562	7/15/16	3/28/17	Complete Genome	James Madison University	SAMN04867629	GCA_001686525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/525/GCA_001686525.1_ASM168652v1	-	VA-15
Actinomyces viscosus C505	562973	PRJNA38743	38743	Terrabacteria group	Actinobacteria	3.1345	68.5	-	ACRE02	5	2664	2468	2/26/10	4/17/17	Scaffold	Broad Institute	SAMN02463750	GCA_000175315.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/315/GCA_000175315.3_Acti_vis_C505_V3	-	C505
Granulicatella elegans ATCC 700633	626369	PRJNA38745	38745	Terrabacteria group	Firmicutes	1.74336	33.4	-	ACRF02	1	1629	1538	9/29/09	4/17/17	Scaffold	Broad Institute	SAMN02595330	GCA_000162475.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/475/GCA_000162475.2_Gran_ele_ATCC_700633_V2	-	ATCC 700633
Actinomyces graevenitzii C83	435830	PRJNA38761	38761	Terrabacteria group	Actinobacteria	2.20573	57.8	-	ACRN01	10	1908	1764	12/22/11	4/7/17	Scaffold	Broad Institute	SAMN02463758	GCA_000239695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/695/GCA_000239695.1_Acti_grae_C83_V1	-	C83
Gemella morbillorum M424	562982	PRJNA38781	38781	Terrabacteria group	Firmicutes	1.75292	30.9	-	ACRX01	18	1670	1548	1/4/11	4/17/17	Scaffold	Broad Institute	SAMN02595332	GCA_000185645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/645/GCA_000185645.1_ASM18564v1	-	M424
Megasphaera micronuciformis F0359	706434	PRJNA43125	43125	Terrabacteria group	Firmicutes	1.76553	45.4	-	AECS01	38	1757	1676	10/26/10	4/17/17	Scaffold	Washington University Genome Center	SAMN00189149	GCA_000165735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/165/735/GCA_000165735.1_ASM16573v1	-	F0359
Bordetella pertussis	520	PRJNA321467	321467	Proteobacteria	Betaproteobacteria	4.14714	67.7	chromosome:NZ_CP015767.1/CP015767.1	-	1	4015	3636	7/15/16	3/28/17	Complete Genome	James Madison University	SAMN04867630	GCA_001686545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/545/GCA_001686545.1_ASM168654v1	-	VA-18
Butyrivibrio fibrisolvens DSM 3071	1121131	PRJEB18246	355529	Terrabacteria group	Firmicutes	4.83726	39.7	-	FQXK01	83	4107	3968	12/2/16	4/6/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02745229	GCA_900129945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/945/GCA_900129945.1_IMG-taxon_2585428068_annotated_assembly	-	DSM 3071
Prevotella buccae ATCC 33574	873513	PRJNA51491	51491	FCB group	Bacteroidetes/Chlorobi group	3.2841	51	-	AEPD01	21	2714	2589	12/20/10	4/10/17	Scaffold	Baylor College of Medicine	SAMN00216833	GCA_000184945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/184/945/GCA_000184945.1_ASM18494v1	-	ATCC 33574
Bordetella pertussis	520	PRJNA321467	321467	Proteobacteria	Betaproteobacteria	4.11578	67.7	chromosome:NZ_CP015768.1/CP015768.1	-	1	3980	3636	7/15/16	3/28/17	Complete Genome	James Madison University	SAMN04867632	GCA_001686565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/565/GCA_001686565.1_ASM168656v1	-	VA-62
Megamonas hypermegale DSM 1672	1122216	PRJNA185642	185642	Terrabacteria group	Firmicutes	2.15737	33.7	-	AUHW01	56	2114	1986	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441496	GCA_000423385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/385/GCA_000423385.1_ASM42338v1	-	DSM 1672
Ruminococcus bromii	40518	PRJEB15717	347659	Terrabacteria group	Firmicutes	2.53948	39.1	-	FMUV01	81	2546	2352	10/17/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02910441	GCA_900101355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/355/GCA_900101355.1_IMG-taxon_2593339225_annotated_assembly	-	YE282
Ruminococcus champanellensis 18P13 = JCM 17042	213810	PRJNA39179	39179	Terrabacteria group	Firmicutes	2.57321	53.3	chromosome:NC_021039.1/FP929052.1	-	1	2371	2259	3/25/10	4/7/17	Chromosome	MetaHIT	SAMEA3138364	GCA_000210095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/095/GCA_000210095.1_ASM21009v1	-	type strain: 18P13
Faecalitalea cylindroides T2-87	717960	PRJNA45917	45917	Terrabacteria group	Firmicutes	1.96675	38.8	chromosome:NC_021019.1/FP929041.1	-	1	1930	1495	3/25/10	4/7/17	Chromosome	metaHIT	SAMEA3138372	GCA_000210615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/615/GCA_000210615.1_ASM21061v1	-	T2-87
Gordonibacter pamelaeae 7-10-1-b	657308	PRJNA39175	39175	Terrabacteria group	Actinobacteria	3.60802	64	chromosome:NC_021021.1/FP929047.1	-	1	3352	2672	3/25/10	4/17/17	Chromosome	MetaHIT	SAMEA3138362	GCA_000210055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/055/GCA_000210055.1_ASM21005v1	-	7-10-1-bT
Bacteroides xylanisolvens CL03T12C04	997892	PRJNA64839	64839	FCB group	Bacteroidetes/Chlorobi group	6.06769	42.2	-	AGXE01	13	4841	4640	6/25/12	5/18/17	Scaffold	Broad Institute	SAMN02463935	GCA_000273315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/315/GCA_000273315.1_Bact_xyla_CL03T12C04_V1	-	CL03T12C04
Bordetella pertussis	520	PRJNA321467	321467	Proteobacteria	Betaproteobacteria	4.11692	67.7	chromosome:NZ_CP015769.1/CP015769.1	-	1	3984	3641	7/15/16	3/28/17	Complete Genome	James Madison University	SAMN04867633	GCA_001686585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/585/GCA_001686585.1_ASM168658v1	-	VA-145
Legionella drancourtii LLAP12	658187	PRJNA39279	39279	Proteobacteria	Gammaproteobacteria	4.15261	39.4	-	ACUL02	58	3684	3375	7/20/09	5/18/17	Scaffold	"Unite de Recherche sur les Maladies Infectieuses et Tropicales Emergentes CNRS-IRD UMR 6236, Marcel, France"	SAMN02471332	GCA_000162755.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/755/GCA_000162755.2_ASM16275v2	22047552	LLAP12
Bordetella pertussis	520	PRJNA321467	321467	Proteobacteria	Betaproteobacteria	4.12172	67.7	chromosome:NZ_CP015770.1/CP015770.1	-	1	3985	3631	7/15/16	3/28/17	Complete Genome	James Madison University	SAMN04867628	GCA_001686605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/605/GCA_001686605.1_ASM168660v1	-	VA-010
Bordetella pertussis	520	PRJNA321467	321467	Proteobacteria	Betaproteobacteria	4.12477	67.7	chromosome:NZ_CP015771.1/CP015771.1	-	1	3985	3612	7/15/16	3/28/17	Complete Genome	James Madison University	SAMN04994865	GCA_001686625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/625/GCA_001686625.1_ASM168662v1	-	VA-UT25Sm1
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.11106	67.7	chromosome:NZ_CP011255.1/CP011255.1	-	1	3971	3613	4/22/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03249375	GCA_001628735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/735/GCA_001628735.1_ASM162873v1	28167525	I344
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.10744	67.7	chromosome:NZ_CP010838.1/CP010838.1	-	1	3975	3632	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03249361	GCA_001605035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/035/GCA_001605035.1_ASM160503v1	"2,730,373,928,167,520"	H374
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.10753	67.7	chromosome:NZ_CP010839.1/CP010839.1	-	1	3966	3606	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03249363	GCA_001605055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/055/GCA_001605055.1_ASM160505v1	"2,730,373,928,167,520"	H378
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.10533	67.7	chromosome:NZ_CP010840.1/CP010840.1	-	1	3969	3617	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03249364	GCA_001605075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/075/GCA_001605075.1_ASM160507v1	"2,730,373,928,167,520"	H379
Pseudomonas coronafaciens pv. garcae	251653	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.50972	57.9	-	LJQK01	109	5149	4824	10/20/15	4/4/17	Scaffold	University of Toronto	SAMN03976287	GCA_001400345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/345/GCA_001400345.1_PgcICMP4323	-	ICMP4323
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.10429	67.7	chromosome:NZ_CP010841.1/CP010841.1	-	1	3968	3616	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03249365	GCA_001605095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/095/GCA_001605095.1_ASM160509v1	"2,730,373,928,167,520"	H380
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.10649	67.7	chromosome:NZ_CP010844.1/CP010844.1	-	1	3965	3608	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03249368	GCA_001605115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/115/GCA_001605115.1_ASM160511v1	"2,730,373,928,167,520"	H559
Prevotella oris DSM 18711 = JCM 12252	1122989	PRJDB568	243147	FCB group	Bacteroidetes/Chlorobi group	3.078	43.8	-	BAJC01	94	2628	1939	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00006051	GCA_000613505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/505/GCA_000613505.1_ASM61350v1	-	JCM 12252
Slackia exigua ATCC 700122	649764	PRJNA38335	38335	Terrabacteria group	Actinobacteria	2.09629	62.1	-	ACUX02	2	1803	1719	8/11/09	4/17/17	Scaffold	WUGSC	SAMN00008861	GCA_000162875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/875/GCA_000162875.1_ASM16287v1	-	ATCC 700122
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.11105	67.7	chromosome:NZ_CP010961.1/CP010961.1	-	1	3974	3599	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03249362	GCA_001605135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/135/GCA_001605135.1_ASM160513v1	"2,730,373,928,167,520"	H375
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.10741	67.7	chromosome:NZ_CP010962.1/CP010962.1	-	1	3974	3615	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03249372	GCA_001605155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/155/GCA_001605155.1_ASM160515v1	"2,730,373,928,167,520"	H627
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.10636	67.7	chromosome:NZ_CP010842.1/CP010842.1	-	1	3966	3619	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03249366	GCA_001605175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/175/GCA_001605175.1_ASM160517v1	"2,730,373,928,167,520"	H489
butyrate-producing bacterium SS3/4	245014	PRJNA39155	39155	Terrabacteria group	Firmicutes	3.60102	48.2	chromosome:FP929062.1	-	1	3051	2993	3/25/10	2/27/15	Chromosome	MetaHIT	SAMEA3138354	GCA_000209895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/209/895/GCA_000209895.1_ASM20989v1	-	SS3/4
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.10335	67.7	chromosome:NZ_CP010843.1/CP010843.1	-	1	3960	3607	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03249367	GCA_001605195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/195/GCA_001605195.1_ASM160519v1	"2,730,373,928,167,520"	H542
Acinetobacter lwoffii	28090	PRJNA359405	359405	Proteobacteria	Gammaproteobacteria	3.49351	42.8485	chromosome:NZ_CP019143.1/CP019143.1; plasmid pZS-11:NZ_CP019150.1/CP019150.1; plasmid pZS-13:NZ_CP019151.1/CP019151.1; plasmid pZS-20:NZ_CP019152.1/CP019152.1; plasmid pZS-3:NZ_CP019145.1/CP019145.1; plasmid pZS-6:NZ_CP019146.1/CP019146.1; plasmid pZS-7:NZ_CP019147.1/CP019147.1; plasmid pZS-8:NZ_CP019148.1/CP019148.1; plasmid pZS-9:NZ_CP019149.1/CP019149.1; plasmid pmZS:NZ_CP019144.1/CP019144.1	-	10	3409	3131	5/9/17	5/22/17	Chromosome	Institute of Biochemistry and Biophysics PAS	SAMN06191591	GCA_002119785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/785/GCA_002119785.1_ASM211978v1	-	ZS207
Prevotella veroralis DSM 19559 = JCM 6290	1122993	PRJNA178044	178044	FCB group	Bacteroidetes/Chlorobi group	2.84575	41.8	-	ARIR01	28	2472	2307	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441351	GCA_000377625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/625/GCA_000377625.1_ASM37762v1	-	DSM 19559
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.07301	67.7	chromosome:NZ_CP010845.1/CP010845.1	-	1	3941	3604	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03249369	GCA_001605215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/215/GCA_001605215.1_ASM160521v1	"2,730,373,928,167,520"	H561
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.10639	67.7	chromosome:NZ_CP010846.1/CP010846.1	-	1	3971	3625	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03249370	GCA_001605235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/235/GCA_001605235.1_ASM160523v1	"2,730,373,928,167,520"	H563
Candidatus Regiella insecticola LSR1	663321	PRJNA39723	39723	Proteobacteria	Gammaproteobacteria	2.0674	42.4361	plasmid pRILSR1:NZ_CM000957.1/CM000957.1	ACYF01	173	2130	1658	7/9/10	6/15/17	Scaffold	International Aphid Genomics Consortium	SAMN02471564	GCA_000143625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/143/625/GCA_000143625.1_ASM14362v1	-	LSR1
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.10743	67.7	chromosome:NZ_CP010847.1/CP010847.1	-	1	3973	3627	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03249371	GCA_001605255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/255/GCA_001605255.1_ASM160525v1	"2,730,373,928,167,520"	H622
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.13378	67.7	chromosome:NZ_CP010963.1/CP010963.1	-	1	3999	3638	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03249373	GCA_001605275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/275/GCA_001605275.1_ASM160527v1	"2,730,373,928,167,520"	C393
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.10298	67.7	chromosome:NZ_CP010964.1/CP010964.1	-	1	3962	3621	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03249374	GCA_001605295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/295/GCA_001605295.1_ASM160529v1	"2,730,373,928,167,520"	E476
[Clostridium] innocuum 2959	999413	PRJNA64877	64877	Terrabacteria group	Firmicutes	4.80367	43.4	-	AGYV01	7	4737	4525	4/19/13	5/19/17	Scaffold	Broad Institute	SAMN02596772	GCA_000371425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/425/GCA_000371425.1_Clos_inno_2959_V1	-	2959
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.10955	67.7	chromosome:NZ_CP010249.1/CP010249.1	-	1	3970	3626	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03249377	GCA_001605345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/345/GCA_001605345.1_ASM160534v1	"2,730,373,928,167,520"	H564
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.10682	67.7	chromosome:NZ_CP010250.1/CP010250.1	-	1	3966	3623	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03167927	GCA_001605365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/365/GCA_001605365.1_ASM160536v1	"2,730,373,928,167,520"	H788
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.1064	67.7	chromosome:NZ_CP010251.1/CP010251.1	-	1	3973	3630	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03249378	GCA_001605385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/385/GCA_001605385.1_ASM160538v1	"2,730,373,928,167,520"	I468
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.11166	67.7	chromosome:NZ_CP010252.1/CP010252.1	-	1	3973	3625	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03249379	GCA_001605405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/405/GCA_001605405.1_ASM160540v1	"2,730,373,928,167,520"	I469
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.11165	67.7	chromosome:NZ_CP010253.1/CP010253.1	-	1	3972	3622	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03249380	GCA_001605425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/425/GCA_001605425.1_ASM160542v1	"2,730,373,928,167,520"	I472
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.10533	67.7	chromosome:NZ_CP010254.1/CP010254.1	-	1	3975	3628	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03216666	GCA_001605445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/445/GCA_001605445.1_ASM160544v1	"2,730,373,928,167,520"	I476
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.10639	67.7	chromosome:NZ_CP010255.1/CP010255.1	-	1	3972	3628	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03216667	GCA_001605465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/465/GCA_001605465.1_ASM160546v1	"2,730,373,928,167,520"	I480
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.10744	67.7	chromosome:NZ_CP010256.1/CP010256.1	-	1	3975	3629	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03216668	GCA_001605485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/485/GCA_001605485.1_ASM160548v1	"2,730,373,928,167,520"	I483
Cylindrospermopsis raciborskii CS-505	533240	PRJNA323609	323609	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.15926	40.3	-	LYXA01	6	3776	3497	6/24/16	4/13/17	Contig	Pontificia Universidad Catolica de Chile	SAMN05182239	GCA_001676585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/585/GCA_001676585.1_ASM167658v1	-	CS505
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.09671	67.7	chromosome:NZ_CP010257.1/CP010257.1	-	1	3966	3622	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03216669	GCA_001605505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/505/GCA_001605505.1_ASM160550v1	"2,730,373,928,167,520"	I496
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.1065	67.7	chromosome:NZ_CP010258.1/CP010258.1	-	1	3965	3616	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03216670	GCA_001605525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/525/GCA_001605525.1_ASM160552v1	"2,730,373,928,167,520"	I498
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.10535	67.7	chromosome:NZ_CP010259.1/CP010259.1	-	1	3971	3627	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03216672	GCA_001605545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/545/GCA_001605545.1_ASM160554v1	"2,730,373,928,167,520"	I518
Erysipelotrichaceae bacterium 3_1_53	658659	PRJNA39371	39371	Terrabacteria group	Firmicutes	4.4862	42.3	-	ACTJ01	85	4257	3857	10/18/10	4/17/17	Scaffold	Broad Institute	SAMN02463768	GCA_000165065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/165/065/GCA_000165065.1_ASM16506v1	-	3_1_53
Erysipelotrichaceae bacterium 6_1_45	469614	PRJNA39373	39373	Terrabacteria group	Firmicutes	4.90716	44	-	ACTK01	10	4822	4593	1/10/12	5/18/17	Scaffold	Broad Institute	SAMN02463769	GCA_000242175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/175/GCA_000242175.1_Erys_bact_6_1_45_V1	-	6_1_45
Lachnospiraceae bacterium 1_1_57FAA	658081	PRJNA39377	39377	Terrabacteria group	Firmicutes	2.93002	41.9	-	ACTM01	39	2734	2429	6/13/11	4/17/17	Scaffold	Broad Institute	SAMN02463771	GCA_000218445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/445/GCA_000218445.1_Lach_bact_1_1_57FAA_V1	-	1_1_57FAA
Lachnospiraceae bacterium 1_4_56FAA	658655	PRJNA39379	39379	Terrabacteria group	Firmicutes	3.2339	45.5	-	ACTN01	32	3145	2840	6/13/11	4/17/17	Scaffold	Broad Institute	SAMN02463772	GCA_000218385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/385/GCA_000218385.1_Lach_bact_1_4_56FAA_V1	-	1_4_56FAA
Lachnospiraceae bacterium 2_1_58FAA	658082	PRJNA39381	39381	Terrabacteria group	Firmicutes	3.46075	42.4	-	ACTO01	41	3437	3082	6/13/11	4/17/17	Scaffold	Broad Institute	SAMN02463773	GCA_000218465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/465/GCA_000218465.1_Lach_bact_2_1_58FAA_V1	-	2_1_58FAA
Lachnospiraceae bacterium 3_1_57FAA_CT1	658086	PRJNA39383	39383	Terrabacteria group	Firmicutes	7.71284	46.8	-	ACTP02	7	6694	6517	6/13/11	4/17/17	Scaffold	Broad Institute	SAMN02463774	GCA_000218405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/405/GCA_000218405.2_Lach_bact_3-1-57FAA_CT1_V1	-	3_1_57FAA_CT1
Lachnospiraceae bacterium 5_1_57FAA	658085	PRJNA39387	39387	Terrabacteria group	Firmicutes	3.33956	46.3	-	ACTR01	51	3388	3130	6/13/11	4/17/17	Scaffold	Broad Institute	SAMN02463775	GCA_000218425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/425/GCA_000218425.1_Lach_bact_5_1_57FAA	-	5_1_57FAA
Lachnospiraceae bacterium 5_1_63FAA	658089	PRJNA39389	39389	Terrabacteria group	Firmicutes	3.04119	37.2	-	ACTS01	48	3025	2543	1/4/11	4/17/17	Scaffold	Broad Institute	SAMN02463776	GCA_000185525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/525/GCA_000185525.1_ASM18552v1	-	5_1_63FAA
Lachnospiraceae bacterium 6_1_37FAA	658656	PRJNA41967	41967	Terrabacteria group	Firmicutes	3.06736	41.1	-	ADCR01	15	2980	2671	3/7/11	4/17/17	Scaffold	Broad Institute	SAMN02463826	GCA_000191805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/805/GCA_000191805.1_Lach_bact_4_1_37FAA_V1	-	6_1_37FAA
Lachnospiraceae bacterium 6_1_63FAA	658083	PRJNA39395	39395	Terrabacteria group	Firmicutes	2.72557	38.8	-	ACTV01	23	2697	2528	4/25/11	4/17/17	Scaffold	Broad Institute	SAMN02463778	GCA_000209425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/209/425/GCA_000209425.1_Lach_bact_6_1_63FAA_V1	-	6_1_63FAA
Lachnospiraceae bacterium 7_1_58FAA	658087	PRJNA39397	39397	Terrabacteria group	Firmicutes	5.66809	58.1	-	ACTW01	102	5910	5397	1/10/12	5/18/17	Scaffold	Broad Institute	SAMN02463779	GCA_000242155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/155/GCA_000242155.1_Lach_bact_7_1_58FAA_V1	-	7_1_58FAA
Lachnospiraceae bacterium 9_1_43BFAA	658088	PRJNA39399	39399	Terrabacteria group	Firmicutes	2.84488	41.4	-	ACTX01	12	2754	2582	4/25/11	4/17/17	Scaffold	Broad Institute	SAMN02463780	GCA_000209445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/209/445/GCA_000209445.1_Lach_bact_9_1_43BFAA_V1	-	9_1_43BFAA
Lachnospiraceae bacterium 3_1_46FAA	665950	PRJNA40027	40027	Terrabacteria group	Firmicutes	3.11822	42.1	-	ACWP01	28	2985	2792	4/25/11	4/17/17	Scaffold	Broad Institute	SAMN02463799	GCA_000209405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/209/405/GCA_000209405.1_Lach_bact_3_1_46FAA_V1	-	3_1_46FAA
Lachnospiraceae bacterium 8_1_57FAA	665951	PRJNA40029	40029	Terrabacteria group	Firmicutes	2.92735	41.9	-	ACWQ01	51	2739	2540	1/4/11	4/17/17	Scaffold	Broad Institute	SAMN02463800	GCA_000185545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/545/GCA_000185545.1_ASM18554v1	-	8_1_57FAA
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.10429	67.7	chromosome:NZ_CP010260.1/CP010260.1	-	1	3973	3629	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03216673	GCA_001605565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/565/GCA_001605565.1_ASM160556v1	"2,730,373,928,167,520"	I521
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.10772	67.7	chromosome:NZ_CP010261.1/CP010261.1	-	1	3973	3630	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03216674	GCA_001605585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/585/GCA_001605585.1_ASM160558v1	"2,730,373,928,167,520"	I538
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.10667	67.7	chromosome:NZ_CP010262.1/CP010262.1	-	1	3973	3629	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03216675	GCA_001605605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/605/GCA_001605605.1_ASM160560v1	"2,730,373,928,167,520"	I539
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.10535	67.7	chromosome:NZ_CP010263.1/CP010263.1	-	1	3969	3626	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03216676	GCA_001605625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/625/GCA_001605625.1_ASM160562v1	"2,730,373,928,167,520"	I646
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.10176	67.7	chromosome:NZ_CP010264.1/CP010264.1	-	1	3970	3633	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03216677	GCA_001605645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/645/GCA_001605645.1_ASM160564v1	"2,730,373,928,167,520"	I656
Raphidiopsis brookii D9	533247	PRJNA40111	40111	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.18651	40.1	-	ACYB01	47	2975	2602	12/15/09	4/17/17	Contig	FLI Jena	SAMN02470244	GCA_000175855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/855/GCA_000175855.1_ASM17585v1	20169071	D9
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.10342	67.7	chromosome:NZ_CP010265.1/CP010265.1	-	1	3964	3622	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03216678	GCA_001605665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/665/GCA_001605665.1_ASM160566v1	"2,730,373,928,167,520"	I669
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.10756	67.7	chromosome:NZ_CP010266.1/CP010266.1	-	1	3969	3622	3/31/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03216679	GCA_001605685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/685/GCA_001605685.1_ASM160568v1	"2,730,373,928,167,520"	I707
Bordetella pertussis	520	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	4.10016	67.7	chromosome:CP014153.1	-	1	3926	3123	2/11/16	2/11/16	Complete Genome	US Food and Drug Administration 	SAMN03996260	GCA_001558395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/395/GCA_001558395.1_ASM155839v1	-	ATCC:BAA-1335D-5
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.0794	67.7	chromosome:NZ_CP010965.1/CP010965.1	-	1	3941	3594	1/11/16	3/27/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03366100	GCA_001509895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/895/GCA_001509895.1_ASM150989v1	"2,681,217,428,167,520"	H321
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.08255	67.7	chromosome:NZ_CP010966.1/CP010966.1	-	1	3949	3600	1/11/16	3/27/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03249376	GCA_001509915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/915/GCA_001509915.1_ASM150991v1	"2,681,217,428,167,520"	I979
Serratia odorifera DSM 4582	667129	PRJNA40087	40087	Proteobacteria	Gammaproteobacteria	5.26739	55.9	-	ADBY01	33	4900	4596	3/23/10	4/7/17	Scaffold	Baylor College of Medicine	SAMN00120576	GCA_000163595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/595/GCA_000163595.1_ASM16359v1	-	DSM 4582
Vibrio orientalis CIP 102891 = ATCC 33934	675816	PRJNA40487	40487	Proteobacteria	Gammaproteobacteria	4.69824	44.8	-	ACZV01	5	4367	4194	10/9/09	4/7/17	Contig	"Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR)"	SAMN02393817	GCA_000176235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/235/GCA_000176235.1_ASM17623v1	-	CIP 102891
Bordetella pertussis	520	PRJNA281570	281570	Proteobacteria	Betaproteobacteria	4.10115	67.7	chromosome:NZ_CP011400.1/CP011400.1	-	1	3966	3621	10/7/15	4/10/17	Complete Genome	RIVM	SAMN03491903	GCA_001307525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/525/GCA_001307525.1_ASM130752v1	26607899	B3629
Bordetella pertussis	520	PRJNA281570	281570	Proteobacteria	Betaproteobacteria	4.1007	67.7	chromosome:NZ_CP011401.1/CP011401.1	-	1	3963	3614	10/7/15	4/10/17	Complete Genome	RIVM	SAMN03491902	GCA_001307565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/565/GCA_001307565.1_ASM130756v1	26607899	B3621
Bordetella pertussis	520	PRJNA281570	281570	Proteobacteria	Betaproteobacteria	4.10847	67.7	chromosome:NZ_CP011440.1/CP011440.1	-	1	3967	3623	10/7/15	3/26/17	Complete Genome	RIVM	SAMN03566780	GCA_001307585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/585/GCA_001307585.1_ASM130758v1	26607899	B1838
Prevotella timonensis 4401737 = DSM 22865 = JCM 15640	1122992	PRJEB81	169199	FCB group	Bacteroidetes/Chlorobi group	3.21707	42.6	-	CBQQ01	25	2604	2432	8/7/13	4/8/17	Scaffold	URMITE	SAMEA2272439	GCA_000455445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/445/GCA_000455445.1_4401737	-	4401737
Vibrio metschnikovii CIP 69.14	675813	PRJNA40493	40493	Proteobacteria	Gammaproteobacteria	3.8151	44.1	-	ACZO01	11	3457	3219	10/6/09	4/17/17	Contig	"Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR)"	SAMN02393820	GCA_000176155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/155/GCA_000176155.1_ASM17615v1	-	CIP 69.14
Bordetella pertussis	520	PRJNA281570	281570	Proteobacteria	Betaproteobacteria	4.10536	67.7	chromosome:NZ_CP011441.1/CP011441.1	-	1	3966	3620	10/7/15	3/26/17	Complete Genome	RIVM	SAMN03566781	GCA_001307605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/605/GCA_001307605.1_ASM130760v1	26607899	B1865
Prevotella buccalis ATCC 35310	679190	PRJNA40669	40669	FCB group	Bacteroidetes/Chlorobi group	3.03396	45.3	-	ADEG01	118	2502	2364	12/15/09	4/7/17	Contig	JCVI	SAMN00003363	GCA_000177075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/075/GCA_000177075.1_ASM17707v1	-	ATCC 35310
Prevotella amnii DSM 23384 = JCM 14753	1122979	PRJNA182435	182435	FCB group	Bacteroidetes/Chlorobi group	2.39194	36.6	-	ARKY01	77	2068	1892	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440476	GCA_000378745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/745/GCA_000378745.1_ASM37874v1	-	DSM 23384
Bulleidia extructa W1219	679192	PRJNA40673	40673	Terrabacteria group	Firmicutes	1.41958	36.3	-	ADFR01	16	1432	1347	1/5/10	4/17/17	Contig	JCVI	SAMN00003365	GCA_000177375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/375/GCA_000177375.1_ASM17737v1	-	W1219
Segniliparus rugosus ATCC BAA-974	679197	PRJNA40685	40685	Terrabacteria group	Actinobacteria	3.58763	68.2	-	ACZI02	2	3474	3318	1/3/11	4/17/17	Scaffold	Broad Institute	SAMN02463810	GCA_000185725.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/725/GCA_000185725.2_Segn_rugo_CDC_945_V2	22675588	ATCC BAA-974
Johnsonella ignava ATCC 51276	679200	PRJNA40693	40693	Terrabacteria group	Firmicutes	2.68708	35.8	-	ACZL01	43	2424	2239	11/10/11	4/17/17	Scaffold	Broad Institute	SAMN02463813	GCA_000235445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/445/GCA_000235445.1_John_igna_ATCC_51276_V1	-	ATCC 51276
Selenomonas infelix ATCC 43532	679201	PRJNA40695	40695	Terrabacteria group	Firmicutes	2.41363	56	-	ACZM01	30	2328	2174	11/2/11	4/17/17	Scaffold	Broad Institute	SAMN02463814	GCA_000234095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/095/GCA_000234095.1_Sele_infe_ATCC_43532_V1	-	ATCC 43532
Bordetella pertussis	520	PRJNA281570	281570	Proteobacteria	Betaproteobacteria	4.10999	67.7	chromosome:NZ_CP011442.1/CP011442.1	-	1	3978	3633	10/7/15	3/26/17	Complete Genome	RIVM	SAMN03566782	GCA_001307625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/625/GCA_001307625.1_ASM130762v1	26607899	B3405
Bordetella pertussis	520	PRJNA281570	281570	Proteobacteria	Betaproteobacteria	4.10431	67.7	chromosome:NZ_CP011443.1/CP011443.1	-	1	3969	3620	10/7/15	3/26/17	Complete Genome	RIVM	SAMN03566783	GCA_001307645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/645/GCA_001307645.1_ASM130764v1	26607899	B3582
Bordetella pertussis	520	PRJNA281570	281570	Proteobacteria	Betaproteobacteria	4.10639	67.7	chromosome:NZ_CP011444.1/CP011444.1	-	1	3970	3627	10/7/15	3/26/17	Complete Genome	RIVM	SAMN03566784	GCA_001307665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/665/GCA_001307665.1_ASM130766v1	26607899	B3585
Bacteroides coprosuis DSM 18011	679937	PRJNA40779	40779	FCB group	Bacteroidetes/Chlorobi group	2.9918	35	chromosome:NZ_CM001167.1/CM001167.1	AFFW01	1	2523	2391	5/9/11	4/17/17	Chromosome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02256469	GCA_000212915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/212/915/GCA_000212915.1_ASM21291v1	21677860	DSM 18011
Bordetella pertussis	520	PRJNA281570	281570	Proteobacteria	Betaproteobacteria	4.11099	67.7	chromosome:NZ_CP011445.1/CP011445.1	-	1	3977	3630	10/7/15	3/26/17	Complete Genome	RIVM	SAMN03566785	GCA_001307685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/685/GCA_001307685.1_ASM130768v1	26607899	B3640
Erysipelotrichaceae bacterium 5_2_54FAA	552396	PRJNA41103	41103	Terrabacteria group	Firmicutes	3.1375	38.2	-	ACZW02	6	2881	2754	3/17/10	4/17/17	Scaffold	Broad Institute	SAMN02463815	GCA_000163515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/515/GCA_000163515.2_Ery_bact_5_2_54FAA_V2	-	5_2_54FAA
alpha proteobacterium HIMB114	684719	PRJNA41237	41237	Proteobacteria	Alphaproteobacteria	1.23737	29.6	-	ADAC02	1	1343	1301	10/20/09	4/17/17	Contig	Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436217	GCA_000163555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/555/GCA_000163555.2_HIMB114_v2.0	-	HIMB114
Citromicrobium bathyomarinum JL354	685035	PRJNA41177	41177	Proteobacteria	Alphaproteobacteria	3.27333	65	-	ADAE01	68	3212	3101	11/16/09	4/17/17	Contig	State Key Laboratory of Marine Environmental Science	SAMN02471020	GCA_000176355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/355/GCA_000176355.1_ASM17635v1	19966001	JL354
Bordetella pertussis	520	PRJNA281570	281570	Proteobacteria	Betaproteobacteria	4.10325	67.7	chromosome:NZ_CP011446.1/CP011446.1	-	1	3971	3626	10/7/15	3/26/17	Complete Genome	RIVM	SAMN03566786	GCA_001307705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/705/GCA_001307705.1_ASM130770v1	26607899	B3658
Bordetella pertussis	520	PRJNA281570	281570	Proteobacteria	Betaproteobacteria	4.10955	67.7	chromosome:NZ_CP011447.1/CP011447.1	-	1	3978	3630	10/7/15	3/26/17	Complete Genome	RIVM	SAMN03566787	GCA_001307725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/725/GCA_001307725.1_ASM130772v1	26607899	B3913
Methylosinus trichosporium OB3b	595536	PRJNA41067	41067	Proteobacteria	Alphaproteobacteria	4.96226	65.9	-	ADVE02	3	4591	4379	5/18/10	4/9/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN02441795	GCA_000178815.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/815/GCA_000178815.2_ASM17881v2	20952571	OB3b
Bordetella pertussis	520	PRJNA281570	281570	Proteobacteria	Betaproteobacteria	4.11156	67.7	chromosome:NZ_CP011448.1/CP011448.1	-	1	3980	3633	10/7/15	3/26/17	Complete Genome	RIVM	SAMN03566788	GCA_001307745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/745/GCA_001307745.1_ASM130774v1	26607899	B3921
Achromobacter xylosoxidans	85698	PRJNA288995	288995	Proteobacteria	Betaproteobacteria	5.87605	67.7	chromosome:NZ_CP012046.1/CP012046.1	-	1	5342	5188	7/9/15	4/3/17	Complete Genome	University of Minnesota	SAMN03840637	GCA_001051055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/055/GCA_001051055.1_ASM105105v1	26294635	MN001
Bordetella pertussis	520	PRJEB9143	282874	Proteobacteria	Betaproteobacteria	4.10639	67.7	chromosome 1:NZ_LN849008.1/LN849008.1	-	1	3967	3622	5/14/15	3/26/17	Complete Genome	WTSI	SAMEA3354379	GCA_001013565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/013/565/GCA_001013565.1_BPD420	-	D420
Bordetella pertussis 137	1403053	PRJNA221122	221122	Proteobacteria	Betaproteobacteria	4.13459	67.7	chromosome:NZ_CP010323.1/CP010323.1	-	1	3981	3603	12/31/14	3/25/17	Complete Genome	Instituto Butantan	SAMN02360353	GCA_000812165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/165/GCA_000812165.1_ASM81216v1	25700409	137
Aminomonas paucivorans DSM 12260	584708	PRJNA33371	33371	Synergistetes	Synergistia	2.63017	67.6	chromosome:NZ_CM001022.1/CM001022.1	AEIV01	1	2473	2382	10/20/10	4/17/17	Chromosome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02256532	GCA_000165795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/165/795/GCA_000165795.1_ASM16579v1	21304733	DSM 12260
Bordetella pertussis B1917	743277	PRJNA46277	46277	Proteobacteria	Betaproteobacteria	4.10219	67.7	chromosome:NZ_CP009751.1/CP009751.1	-	1	3964	3620	11/13/14	3/25/17	Complete Genome	RIVM	SAMN02470863	GCA_000193595.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/595/GCA_000193595.3_ASM19359v3	"2,107,062,425,540,340"	B1917
Bordetella pertussis 18323	568706	PRJEB144	174407	Proteobacteria	Betaproteobacteria	4.04385	67.7	chromosome:NC_018518.1/HE965805.1	-	1	3896	3533	8/20/12	3/23/17	Complete Genome	WTSI	SAMEA2272749	GCA_000306945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/945/GCA_000306945.1_ASM30694v1	23051057	18323
Pseudoxanthomonas spadix BD-a59	1045855	PRJNA67981	67981	Proteobacteria	Gammaproteobacteria	3.45255	67.7	chromosome:NC_016147.2/CP003093.2	-	1	3158	3029	11/2/11	4/17/17	Complete Genome	Chung-Ang Univ.	SAMN02603133	GCA_000233915.4	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/915/GCA_000233915.4_ASM23391v4	22207748	BD-a59
Bordetella pertussis CS	1017264	PRJNA66287	66287	Proteobacteria	Betaproteobacteria	4.12424	67.7	chromosome:NC_017223.1/CP002695.1	-	1	3983	3634	5/10/11	5/18/17	Complete Genome	National Institute for the Control of Pharmaceutical and Biological Products	SAMN02603647	GCA_000212975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/212/975/GCA_000212975.1_ASM21297v1	21622744	CS
Caulobacter segnis ATCC 21756	509190	PRJNA37277	37277	Proteobacteria	Alphaproteobacteria	4.65562	67.7	chromosome:NC_014100.1/CP002008.1	-	1	4330	4105	4/30/10	5/18/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598513	GCA_000092285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/285/GCA_000092285.1_ASM9228v1	-	ATCC 21756
Prevotella multisaccharivorax DSM 17128	688246	PRJNA41513	41513	FCB group	Bacteroidetes/Chlorobi group	3.38864	48.3	-	AFJE01	3	2845	2630	6/13/11	4/17/17	Scaffold	US DOE Joint Genome Institute (JGI-PGF)	SAMN02256517	GCA_000218235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/235/GCA_000218235.1_ASM21823v1	22180809	DSM 17128
Leifsonia xyli subsp. xyli str. CTCB07	281090	PRJNA212	212	Terrabacteria group	Actinobacteria	2.58416	67.7	chromosome:NC_006087.1/AE016822.1	-	1	2554	2191	8/4/04	4/6/17	Complete Genome	Sao Paulo state (Brazil) Consortium	SAMN02603772	GCA_000007665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/665/GCA_000007665.1_ASM766v1	15305603	CTCB07
Bordetella pertussis Tohama I	257313	PRJNA26	26	Proteobacteria	Betaproteobacteria	4.08619	67.7	chromosome:NC_002929.2/BX470248.1	-	1	3856	3425	11/6/01	8/28/16	Complete Genome	Sanger Institute	SAMEA1705933	GCA_000195715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/715/GCA_000195715.1_ASM19571v1	12910271	Tohama I
Thauera sp. K11	2005884	PRJNA388505	388505	Proteobacteria	Betaproteobacteria	5.29153	67.6881	chromosome:CP023439.1; plasmid pTX1:CP023440.1	-	2	4635	4416	9/25/17	9/25/17	Complete Genome	China University of Petroleum	SAMN07178247	GCA_002354895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/895/GCA_002354895.1_ASM235489v1	-	K11
Burkholderia thailandensis E254	1249665	PRJNA178705	178705	Proteobacteria	Betaproteobacteria	6.67673	67.687	chromosome 1:NZ_CP004381.1/CP004381.1; chromosome 2:NZ_CP004382.1/CP004382.1	-	2	6386	5842	10/10/14	4/2/17	Complete Genome	Los Alamos National Laboratory	SAMN03097424	GCA_000765375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/375/GCA_000765375.1_ASM76537v1	25931592	E254
Burkholderia thailandensis E444	1249662	PRJNA178702	178702	Proteobacteria	Betaproteobacteria	6.6517	67.6859	chromosome 1:NZ_CP004117.1/CP004117.1; chromosome 2:NZ_CP004118.1/CP004118.1	-	2	6357	5779	2/10/14	4/10/17	Complete Genome	Los Alamos National Laboratory	SAMN03081450	GCA_000567945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/945/GCA_000567945.1_ASM56794v1	-	E444
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.58381	67.6836	chromosome 1:NZ_CP013459.1/CP013459.1; chromosome 2:NZ_CP013461.1/CP013461.1; chromosome 3:NZ_CP013460.1/CP013460.1	-	3	6857	6506	9/2/16	4/5/17	Complete Genome	Northern Arizona University	SAMN03449637	GCA_001718955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/955/GCA_001718955.1_ASM171895v1	-	MSMB735WGS
uncultured bacterium	77133	PRJEB6004	248810	environmental samples	uncultured bacterium	1.27903	59.7	-	CCWZ01	42	-	1290	9/15/14	9/15/14	Contig	Institut of Biology	SAMEA2439287	GCA_000821145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/145/GCA_000821145.1_Metasoil_fosmids_resub	-	-
Mesorhizobium ciceri ca181	682633	PRJNA40923	40923	Proteobacteria	Alphaproteobacteria	7.04148	61.4247	chromosome chr:NZ_CM002796.1/CM002796.1	ASTL01	1	6309	5372	10/18/13	4/18/17	Chromosome	Application of Microorganisms in Agriculture and Allied Sectors	SAMN02470606	GCA_000474725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/725/GCA_000474725.1_MciceriCa181_1.0	-	ca181
Azospirillum lipoferum 4B	862719	PRJEA50367	50367	Proteobacteria	Alphaproteobacteria	6.8464	67.6703	chromosome:NC_016622.1/FQ311868.1; plasmid AZO_p1:NC_016585.1/FQ311869.1; plasmid AZO_p2:NC_016586.1/FQ311870.1; plasmid AZO_p3:NC_016623.1/FQ311871.1; plasmid AZO_p4:NC_016587.1/FQ311872.1; plasmid AZO_p5:NC_016624.1/FQ311873.1; plasmid AZO_p6:NC_016588.1/FQ311874.1	-	7	6137	5950	11/16/11	5/18/17	Complete Genome	Laboratoire d'Ecologie Microbienne UMR-CNRS 5557	SAMEA2272642	GCA_000283655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/655/GCA_000283655.1_ASM28365v1	22216014	4B
Burkholderia thailandensis USAMRU Malaysia #20	1249667	PRJNA178714	178714	Proteobacteria	Betaproteobacteria	6.68436	67.6643	chromosome 1:NZ_CP004383.1/CP004383.1; chromosome 2:NZ_CP004384.1/CP004384.1	-	2	6419	5866	6/13/14	4/2/17	Complete Genome	Los Alamos National Laboratory	SAMN02850988	GCA_000706745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/745/GCA_000706745.1_ASM70674v1	25931592	USAMRU Malaysia #20
Burkholderiales bacterium 1_1_47	469610	PRJNA41965	41965	Proteobacteria	Betaproteobacteria	2.65565	48.5	-	ADCQ01	37	2487	2353	7/27/10	4/17/17	Scaffold	Broad Institute	SAMN02463825	GCA_000144975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/975/GCA_000144975.1_ASM14497v1	-	1_1_47
Enterobacteriaceae bacterium 9_2_54FAA	469613	PRJNA41973	41973	Proteobacteria	Gammaproteobacteria	4.49707	48	-	ADCU02	5	4191	4001	1/4/11	4/17/17	Contig	Broad Institute	SAMN02463829	GCA_000185685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/685/GCA_000185685.2_Ente_bact_9_2_54FAA_V2	-	9_2_54FAA
Burkholderia thailandensis MSMB59	1250339	PRJNA178997	178997	Proteobacteria	Betaproteobacteria	6.7395	67.6608	chromosome 1:NZ_CP004385.1/CP004385.1; chromosome 2:NZ_CP004386.1/CP004386.1	-	2	6486	5949	10/8/14	4/2/17	Complete Genome	Los Alamos National Laboratory	SAMN03097425	GCA_000764595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/595/GCA_000764595.1_ASM76459v1	-	MSMB59
Simonsiella muelleri ATCC 29453	641147	PRJNA41981	41981	Proteobacteria	Betaproteobacteria	2.37261	41.6	-	ADCY02	29	2319	2133	3/30/10	4/8/17	Scaffold	Broad Institute	SAMN02463833	GCA_000163775.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/775/GCA_000163775.2_Simo_muel_ATCC_29453_V2	-	ATCC 29453
Erysipelotrichaceae bacterium 2_2_44A	457422	PRJNA41983	41983	Terrabacteria group	Firmicutes	4.98647	43.4	-	ADCZ01	36	5029	4770	9/9/11	5/18/17	Scaffold	Broad Institute	SAMN02463834	GCA_000225685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/685/GCA_000225685.1_Erys_bact_2_2_44A_V1	-	2_2_44A
Capnocytophaga granulosa ATCC 51502	641143	PRJNA41985	41985	FCB group	Bacteroidetes/Chlorobi group	2.74628	41.5	-	ADDA01	20	2526	2391	6/13/13	4/8/17	Scaffold	Broad Institute	SAMN02595375	GCA_000411115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/115/GCA_000411115.1_Capn_gran_ATCC_51502_V1	-	ATCC 51502
Burkholderia thailandensis	57975	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.73953	67.6606	chromosome 1:NZ_CP013407.1/CP013407.1; chromosome 2:NZ_CP013408.1/CP013408.1	-	2	6496	5974	9/2/16	4/5/17	Complete Genome	Northern Arizona University	SAMN03449259	GCA_001718595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/595/GCA_001718595.1_ASM171859v1	-	MSMB59
Burkholderia gladioli pv. gladioli	32009	PRJNA390908	390908	Proteobacteria	Betaproteobacteria	8.85484	67.6539	chromosome 1:NZ_CP022005.1/CP022005.1; chromosome 2:NZ_CP022006.1/CP022006.1; plasmid pls1:NZ_CP022007.1/CP022007.1; plasmid pls2:NZ_CP022008.1/CP022008.1; plasmid pls3:NZ_CP022009.1/CP022009.1	-	5	7653	7221	6/26/17	6/28/17	Complete Genome	Seoul National University	SAMN07253176	GCA_002208175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/175/GCA_002208175.1_ASM220817v1	-	KACC 11889
Bacteroidetes oral taxon 274 str. F0058	575590	PRJNA41957	41957	FCB group	Bacteroidetes/Chlorobi group	2.11354	43.1	-	ADCM01	10	1943	1857	4/28/10	4/17/17	Scaffold	Broad Institute	SAMN02463821	GCA_000163695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/695/GCA_000163695.1_ASM16369v1	-	F0058
Bilophila wadsworthia ATCC 49260	1408428	PRJNA223063	223063	Proteobacteria	delta/epsilon subdivisions	4.63044	59.2	-	JNJP01	198	4270	4035	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841163	GCA_000701705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/705/GCA_000701705.1_ASM70170v1	-	ATCC 49260
Burkholderia thailandensis	57975	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.729	67.6527	chromosome 1:NZ_CP013360.1/CP013360.1; chromosome 2:NZ_CP013361.1/CP013361.1	-	2	6468	5896	9/2/16	4/5/17	Complete Genome	Northern Arizona University	SAMN03449126	GCA_001718295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/295/GCA_001718295.1_ASM171829v1	-	2003015869
Burkholderia thailandensis	57975	PRJNA244538	244538	Proteobacteria	Betaproteobacteria	6.72912	67.6527	chromosome 1:NZ_CP008914.2/CP008914.2; chromosome 2:NZ_CP008915.2/CP008915.2	-	2	6472	5899	9/18/14	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN02904338	GCA_000808035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/035/GCA_000808035.2_ASM80803v2	25414490	2003015869
Burkholderia thailandensis 2002721643	1249660	PRJNA238545	238545	Proteobacteria	Betaproteobacteria	6.7228	67.6469	chromosome I:NZ_CP009601.1/CP009601.1; chromosome II:NZ_CP009602.1/CP009602.1	-	2	6422	5911	3/20/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03085865	GCA_000959425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/425/GCA_000959425.1_ASM95942v1	25931592	2002721643
Burkholderia thailandensis E264	271848	PRJNA10774	10774	Proteobacteria	Betaproteobacteria	6.72397	67.6468	chromosome I:NC_007651.1/CP000086.1; chromosome II:NC_007650.1/CP000085.1	-	2	6422	5912	12/15/05	5/18/17	Complete Genome	TIGR	SAMN02604021	GCA_000012365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/365/GCA_000012365.1_ASM1236v1	16336651	E264; ATCC 700388
Bosea sp. RAC05	1842539	PRJNA319834	319834	Proteobacteria	Alphaproteobacteria	5.62012	67.6434	chromosome:NZ_CP016464.1/CP016464.1; plasmid pBSY19_1:NZ_CP016463.1/CP016463.1	-	2	5378	5243	8/25/16	4/13/17	Complete Genome	Los Alamos National Laboratory	SAMN04909716	GCA_001713455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/455/GCA_001713455.1_ASM171345v1	-	RAC05
Azospirillum sp. B510	137722	PRJDA32551	32551	Proteobacteria	Alphaproteobacteria	7.59974	67.6272	chromosome:NC_013854.1/AP010946.1; plasmid pAB510a:NC_013855.1/AP010947.1; plasmid pAB510b:NC_013856.1/AP010948.1; plasmid pAB510c:NC_013857.1/AP010949.1; plasmid pAB510d:NC_013858.1/AP010950.1; plasmid pAB510e:NC_013859.1/AP010951.1; plasmid pAB510f:NC_013860.1/AP010952.1	-	7	6692	6387	2/17/10	5/28/17	Complete Genome	Kazusa DNA Research Institute	SAMD00060958	GCA_000010725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/725/GCA_000010725.1_ASM1072v1	20047946	B510
Ruminococcaceae bacterium D16	552398	PRJNA42541	42541	Terrabacteria group	Firmicutes	3.19735	56.8	-	ADDX02	6	3170	3061	3/22/10	4/17/17	Scaffold	Broad Institute	SAMN02463841	GCA_000177015.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/015/GCA_000177015.3_Rumi_bact_D16_V2	-	D16
Rhodococcus opacus B4	632772	PRJDA34839	34839	Terrabacteria group	Actinobacteria	8.83494	67.6253	chromosome:NC_012522.1/AP011115.1; plasmid pKNR:NC_012523.1/AP011118.1; plasmid pKNR01:NC_006969.2/AP011119.1; plasmid pKNR02:NC_006970.2/AP011120.1; plasmid pROB01:NC_012520.1/AP011116.1; plasmid pROB02:NC_012521.1/AP011117.1	-	6	8227	7837	4/2/09	3/29/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00060964	GCA_000010805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/805/GCA_000010805.1_ASM1080v1	-	B4
Megasphaera genomosp. type_1 str. 28L	699218	PRJNA42553	42553	Terrabacteria group	Firmicutes	1.7262	46.1	-	ADGP01	34	1616	1521	3/9/10	4/17/17	Contig	JCVI	SAMN00006220	GCA_000177555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/555/GCA_000177555.1_ASM17755v1	-	28L
Burkholderia gladioli	28095	PRJNA238809	238809	Proteobacteria	Betaproteobacteria	8.89946	67.6197	chromosome 1:NZ_CP009323.1/CP009323.1; chromosome 2:NZ_CP009322.1/CP009322.1; plasmid 3:NZ_CP009319.1/CP009319.1; plasmid 1:NZ_CP009321.1/CP009321.1; plasmid 2:NZ_CP009320.1/CP009320.1	-	5	7729	7386	3/20/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03010439	GCA_000959725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/725/GCA_000959725.1_ASM95972v1	25931592	ATCC 10248
Candidatus Poribacteria bacterium WGA-A3	700750	PRJEA42397	42397	unclassified Bacteria	Bacteria candidate phyla	0.413938	48.7	-	ADFK02	158	-	-	1/13/10	7/29/15	Contig	University of Wuerzburg	SAMN02472029	GCA_000177275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/275/GCA_000177275.2_ASM17727v2	"2,061,379,023,842,650"	WGA-A3
Prauserella marina	530584	PRJNA326530	326530	Terrabacteria group	Actinobacteria	6.98641	67.6077	chromosome:NZ_CP016353.1/CP016353.1; plasmid pPmarDSM45268:NZ_CP016354.1/CP016354.1	-	2	6539	6374	8/3/17	8/6/17	Complete Genome	Bielefeld University	SAMN05284052	GCA_002240355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/355/GCA_002240355.1_ASM224035v1	-	DSM 45268
Ramlibacter tataouinensis	94132	PRJNA275370	275370	Proteobacteria	Betaproteobacteria	4.91663	67.6	chromosome:NZ_CP010951.1/CP010951.1	-	1	4608	4518	3/7/16	4/12/17	Complete Genome	Chung-Ang University	SAMN03342428	GCA_001580455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/455/GCA_001580455.1_ASM158045v1	24425747	10-May
Listeria marthii FSL S4-120	702457	PRJNA42849	42849	Terrabacteria group	Firmicutes	2.88455	37.678	chromosome:CM001047.1	ADXF01	1	5936	5926	12/6/10	11/19/13	Chromosome	Life Technologies Corporation	SAMN01909075	GCA_000183865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/865/GCA_000183865.1_ASM18386v1	21126366	FSL S4-120
Turicibacter sanguinis PC909	702450	PRJNA42765	42765	Terrabacteria group	Firmicutes	2.95341	34.1	-	ADMN01	125	2797	2696	3/30/10	4/7/17	Contig	JCVI	SAMN00007491	GCA_000178255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/255/GCA_000178255.1_ASM17825v1	21183674	PC909
Mycobacterium goodii	134601	PRJNA288832	288832	Terrabacteria group	Actinobacteria	7.10593	67.6	chromosome:NZ_CP012150.1/CP012150.1	-	1	6718	6448	7/27/15	4/16/17	Complete Genome	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN03839023	GCA_001187505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/505/GCA_001187505.1_ASM118750v1	-	X7B
Achromobacter xylosoxidans	85698	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	6.56393	67.5905	chromosome:CP014065.1; plasmid unnamed:CP014066.1	-	2	5951	5022	2/11/16	2/11/16	Complete Genome	US Food and Drug Administration 	SAMN03996305	GCA_001558915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/915/GCA_001558915.1_ASM155891v1	-	FDAARGOS_162
Mycobacterium chimaera	222805	PRJNA294790	294790	Terrabacteria group	Actinobacteria	6.33004	67.5628	chromosome:NZ_CP012885.2/CP012885.2; plasmid unnamed1:NZ_CP012886.2/CP012886.2; plasmid unnamed2:NZ_CP012887.2/CP012887.2; plasmid unnamed3:NZ_CP012888.2/CP012888.2	-	4	6005	5596	9/30/16	4/16/17	Complete Genome	National Jewish Health	SAMN04032872	GCA_001750065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/065/GCA_001750065.2_ASM175006v2	-	AH16
Prevotella oulorum JCM 14966	1236497	PRJDB584	243159	FCB group	Bacteroidetes/Chlorobi group	2.82776	46.8	-	BAJQ01	138	2518	1976	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00009236	GCA_000613785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/785/GCA_000613785.1_ASM61378v1	-	JCM 14966
Cupriavidus gilardii CR3	1267562	PRJNA183450	183450	Proteobacteria	Betaproteobacteria	5.57874	67.5462	chromosome 1:NZ_CP010516.1/CP010516.1; chromosome 2:NZ_CP010517.1/CP010517.1	-	2	4992	4401	9/14/15	4/11/17	Complete Genome	"Key Laboratory for Wetland Ecology and Vegetation Restoration of National Environmental Protection, Norhteast Normal Univesity, China"	SAMN02665997	GCA_001281465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/465/GCA_001281465.1_ASM128146v1	26301592	CR3
Mycobacterium chimaera	222805	PRJNA344472	344472	Terrabacteria group	Actinobacteria	6.24769	67.5446	chromosome:NZ_CP019221.1/CP019221.1; plasmid pDHQP20152271_1:NZ_CP019224.1/CP019224.1; plasmid pDHQP20152271_2:NZ_CP019223.1/CP019223.1; plasmid pDHQP20152271_3:NZ_CP019222.1/CP019222.1	-	4	5837	5619	6/5/17	6/7/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05824346	GCA_002166795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/795/GCA_002166795.1_ASM216679v1	-	CDC 2015-22-71
Burkholderia thailandensis 2002721723	1241582	PRJNA177185	177185	Proteobacteria	Betaproteobacteria	6.57713	67.5432	chromosome 1:NZ_CP004097.1/CP004097.1; chromosome 2:NZ_CP004098.1/CP004098.1	-	2	6324	5789	2/10/14	4/2/17	Complete Genome	Los Alamos National Laboratory	SAMN03081449	GCA_000567925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/925/GCA_000567925.1_ASM56792v1	-	2002721723
Mycobacterium chimaera	222805	PRJNA313770	313770	Terrabacteria group	Actinobacteria	6.3796	67.5337	chromosome:NZ_CP015272.1/CP015272.1; plasmid unnamed 1:NZ_CP015273.1/CP015273.1; plasmid unnamed 2:NZ_CP015274.1/CP015274.1; plasmid unnamed 3:NZ_CP015275.1/CP015275.1; plasmid unnamed 4:NZ_CP015276.1/CP015276.1; plasmid unnamed 5:NZ_CP015277.1/CP015277.1	-	6	5973	5725	7/14/17	7/17/17	Complete Genome	Leibniz Institute DSMZ	SAMN04525300	GCA_002219265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/219/265/GCA_002219265.1_ASM221926v1	-	ZUERICH-1
Cryobacterium sp. LW097	1978566	PRJNA382476	382476	Terrabacteria group	Actinobacteria	3.96133	67.5295	chromosome:NZ_CP021992.1/CP021992.1; plasmid unnamed1:NZ_CP021994.1/CP021994.1; plasmid unnamed2:NZ_CP021993.1/CP021993.1	-	3	3736	3613	6/22/17	6/24/17	Complete Genome	Shihezi University	SAMN06706674	GCA_002205495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/495/GCA_002205495.1_ASM220549v1	-	LW097
Prevotella nigrescens ATCC 33563	997352	PRJNA64737	64737	FCB group	Bacteroidetes/Chlorobi group	2.66919	42.7	-	AFPX01	24	2217	2075	7/7/11	4/7/17	Scaffold	Baylor College of Medicine	SAMN00262639	GCA_000220235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/235/GCA_000220235.1_ASM22023v1	-	ATCC 33563
Solobacterium moorei DSM 22971	1123263	PRJNA188328	188328	Terrabacteria group	Firmicutes	2.33595	37	-	AUKY01	169	2430	2185	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441153	GCA_000425005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/005/GCA_000425005.1_ASM42500v1	-	DSM 22971
Burkholderia pseudomallei	28450	PRJNA231208	231208	Proteobacteria	Betaproteobacteria	7.81414	67.5125	chromosome 1:NZ_CP009157.1/CP009157.1; chromosome 2:NZ_CP009156.1/CP009156.1; plasmid 1:NZ_CP009155.1/CP009155.1; plasmid 2:NZ_CP009154.1/CP009154.1	-	4	8043	7385	10/31/14	9/21/17	Complete Genome	Los Alamos National Laboratory	SAMN02951647	GCA_000770565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/565/GCA_000770565.1_ASM77056v1	25676747	TSV202
Desulfovibrio fructosivorans JJ	596151	PRJNA43359	43359	Proteobacteria	delta/epsilon subdivisions	4.67359	63.9	-	AECZ01	75	4160	4046	8/10/10	5/18/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN00103625	GCA_000179555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/555/GCA_000179555.1_ASM17955v1	-	JJ
Helicobacter suis HS1	710393	PRJNA43415	43415	Proteobacteria	delta/epsilon subdivisions	1.63529	39.9	-	ADGY01	136	1656	1497	2/1/11	3/30/17	Contig	"Ghent University, Faculty of Veterinary Medicine, Department of Pathology, Bacteriology and Avian Diseases"	SAMN02469776	GCA_000187625.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/625/GCA_000187625.2_ASM18762v1	21414191	HS1
Burkholderia thailandensis MSMB121	1249661	PRJNA178701	178701	Proteobacteria	Betaproteobacteria	6.73138	67.5106	chromosome 1:NC_021173.1/CP004095.1; chromosome 2:NC_021174.1/CP004096.1	-	2	6411	5844	4/30/13	4/10/17	Complete Genome	Los Alamos National Laboratory	SAMN02603567	GCA_000385525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/525/GCA_000385525.1_ASM38552v1	-	MSMB121
Gordonia sp. KTR9	337191	PRJNA50495	50495	Terrabacteria group	Actinobacteria	5.88571	67.5101	chromosome:NC_018581.1/CP002907.1; plasmid pGKT1:NC_018582.1/CP002908.1; plasmid pGKT2:NC_018580.1/CP002112.1; plasmid pGKT3:NC_018583.1/CP002909.1	-	4	5321	5177	9/10/12	4/17/17	Complete Genome	"Department of Microbiology & Immunology, University of British Columbia, Vancouver, British Columbia, Canada."	SAMN02603183	GCA_000143885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/143/885/GCA_000143885.2_ASM14388v2	22923396	KTR9
Rhodococcus sp. 2G	1570939	PRJNA353162	353162	Terrabacteria group	Actinobacteria	5.59651	67.5064	chromosome:NZ_CP018063.1/CP018063.1; plasmid p1:NZ_CP018064.1/CP018064.1	-	2	5256	4930	11/28/16	4/16/17	Complete Genome	Jinan University	SAMN06011250	GCA_001886355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/355/GCA_001886355.1_ASM188635v1	-	2G
Bordetella genomosp. 13	463040	PRJNA385118	385118	Proteobacteria	Betaproteobacteria	5.38093	67.5	chromosome:NZ_CP021111.1/CP021111.1	-	1	4858	4736	5/9/17	5/22/17	Complete Genome	University of Michigan	SAMN06767129	GCA_002119665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/665/GCA_002119665.1_ASM211966v1	-	AU7206
Brevundimonas naejangsanensis	588932	PRJNA242372	242372	Proteobacteria	Alphaproteobacteria	2.97153	67.5	chromosome:NZ_CP015614.1/CP015614.1	-	1	2859	2772	5/19/16	4/12/17	Complete Genome	Beijing University of Chemical Technology	SAMN02693465	GCA_000635915.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/915/GCA_000635915.2_ASM63591v2	24903872	B1
Azospirillum humicireducens	1226968	PRJNA318554	318554	Proteobacteria	Alphaproteobacteria	3.18162	67.5	chromosome:NZ_CP015285.1/CP015285.1	-	1	2935	2846	5/6/16	4/12/17	Complete Genome	Guangdong Institute of Eco-Environmental and Soil Sciences	SAMN04858219	GCA_001639105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/105/GCA_001639105.1_ASM163910v1	23264502	SgZ-5
Sulfurifustis variabilis	1675686	PRJDB4108	311120	Proteobacteria	Gammaproteobacteria	3.95881	67.5	chromosome:AP014936.1	-	1	3913	3864	2/5/16	9/17/16	Complete Genome	"The Institute of Low Temperature Science, Hokkaido University"	SAMD00036173	GCA_002355415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/415/GCA_002355415.1_ASM235541v1	-	skN76
[Polyangium] brachysporum	413882	PRJNA282341	282341	Proteobacteria	Betaproteobacteria	6.47615	67.5	chromosome:NZ_CP011371.1/CP011371.1	-	1	5600	5416	6/1/15	4/16/17	Complete Genome	Fudan University	SAMN03568762	GCA_001017435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/435/GCA_001017435.1_ASM101743v1	-	DSM 7029
Komagataeibacter hansenii ATCC 23769	714995	PRJNA43711	43711	Proteobacteria	Alphaproteobacteria	3.63666	59.3481	chromosome:NZ_CM000920.1/CM000920.1	ADTV01	1	6506	6286	5/11/10	3/30/17	Chromosome	Penn State University	SAMN02471114	GCA_000164395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/395/GCA_000164395.1_ASM16439v1	20543071	ATCC 23769
Mucilaginibacter paludis DSM 18603	714943	PRJNA43733	43733	FCB group	Bacteroidetes/Chlorobi group	8.40832	42.9	chromosome:NZ_CM001403.1/CM001403.1	AEIH02	1	7149	6975	11/5/10	5/19/17	Chromosome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02256535	GCA_000166195.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/195/GCA_000166195.3_ASM16619v3	-	DSM 18603
Paenibacillus vortex V453	715225	PRJNA43739	43739	Terrabacteria group	Firmicutes	6.38595	48.8	-	ADHJ01	56	5867	5192	12/21/10	5/19/17	Contig	Tauber Initiative	SAMN02471038	GCA_000193415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/415/GCA_000193415.2_ASM19341v1	21167037	V453
Asticcacaulis biprosthecum C19	715226	PRJNA43745	43745	Proteobacteria	Alphaproteobacteria	5.41153	60.7	-	ADUH01	6	4718	4518	4/11/11	5/18/17	Scaffold	Indiana University	SAMN02469919	GCA_000204015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/015/GCA_000204015.1_ASM20401v1	-	C19
Acetivibrio cellulolyticus CD2	509191	PRJNA45843	45843	Terrabacteria group	Firmicutes	6.15674	35.5	-	AEDB02	10	5048	4806	8/11/10	5/18/17	Scaffold	US DOE Joint Genome Institute (JGI-PGF)	SAMN02256541	GCA_000179595.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/595/GCA_000179595.2_ASM17959v2	-	CD2
Achromobacter xylosoxidans NBRC 15126 = ATCC 27061	1216976	PRJNA209573	209573	Proteobacteria	Betaproteobacteria	6.68358	67.5	chromosome:CP006958.1	-	1	6146	6065	12/16/13	7/9/15	Complete Genome	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN02641513	GCA_000508285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/285/GCA_000508285.1_ASM50828v1	-	NBRC 15126 = ATCC 27061
Coprococcus catus GD/7	717962	PRJEA45861	45861	Terrabacteria group	Firmicutes	3.5227	43.2	chromosome:FP929038.1	-	1	3040	2985	3/25/10	2/27/15	Chromosome	metaHIT	SAMEA2272068	GCA_000210555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/555/GCA_000210555.1_ASM21055v1	-	GD/7
Alistipes shahii WAL 8301	717959	PRJNA45913	45913	FCB group	Bacteroidetes/Chlorobi group	3.76332	57.2	chromosome:NC_021030.1/FP929032.1	-	1	3161	2919	3/25/10	4/17/17	Chromosome	metaHIT	SAMEA3138370	GCA_000210575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/575/GCA_000210575.1_ASM21057v1	-	WAL 8301
Fretibacterium fastidiosum	651822	PRJNA45959	45959	Synergistetes	Synergistia	2.72834	61.5	chromosome:FP929056.1	-	1	1476	1435	3/25/10	8/7/15	Chromosome	metaHIT	SAMEA3138377	GCA_000210715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/715/GCA_000210715.1_ASM21071v1	-	SGP1
Rhodanobacter denitrificans	666685	PRJNA50861	50861	Proteobacteria	Gammaproteobacteria	4.22549	67.5	chromosome:NC_020541.1/CP003470.1	-	1	3898	3796	3/11/13	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02232048	GCA_000230695.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/695/GCA_000230695.3_ASM23069v3	-	2APBS1
Stigmatella aurantiaca DW4/3-1	378806	PRJNA52561	52561	Proteobacteria	delta/epsilon subdivisions	10.2608	67.5	chromosome:NC_014623.1/CP002271.1	-	1	8368	8123	10/21/10	4/7/17	Complete Genome	Max Planck Institute for Terrestrial Microbiology	SAMN02603592	GCA_000165485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/165/485/GCA_000165485.1_ASM16548v1	21037205	DW4/3-1
Alkalilimnicola ehrlichii MLHE-1	187272	PRJNA15763	15763	Proteobacteria	Gammaproteobacteria	3.27594	67.5	chromosome:NC_008340.1/CP000453.1	-	1	2942	2858	9/12/06	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02598349	GCA_000014785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/785/GCA_000014785.1_ASM1478v1	-	MLHE-1
Thermobifida fusca YX	269800	PRJNA94	94	Terrabacteria group	Actinobacteria	3.64225	67.5	chromosome:NC_007333.1/CP000088.1	-	1	3148	3064	8/8/05	4/6/17	Complete Genome	DOE Joint Genome Institute	SAMN02598543	GCA_000012405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/405/GCA_000012405.1_ASM1240v1	-	YX
butyrate-producing bacterium SM4/1	245012	PRJNA45955	45955	Terrabacteria group	Firmicutes	3.10887	49.8	chromosome:FP929060.1	-	1	1715	1684	3/25/10	2/27/15	Chromosome	metaHIT	SAMEA3138375	GCA_000210675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/675/GCA_000210675.1_ASM21067v1	-	SM4/1
Variovorax paradoxus S110	543728	PRJNA30453	30453	Proteobacteria	Betaproteobacteria	6.755	67.4998	chromosome 1:NC_012791.1/CP001635.1; chromosome 2:NC_012792.1/CP001636.1	-	2	6424	6247	6/11/09	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598472	GCA_000023345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/345/GCA_000023345.1_ASM2334v1	-	S110
Burkholderia thailandensis	57975	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.95026	67.4985	chromosome 1:NZ_CP013411.1/CP013411.1; chromosome 2:NZ_CP013413.1/CP013413.1; plasmid p2002721643:NZ_CP013412.1/CP013412.1	-	3	6759	6108	9/2/16	4/10/17	Complete Genome	Northern Arizona University	SAMN04196788	GCA_001718635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/635/GCA_001718635.1_ASM171863v1	-	2002721643
[Eubacterium] cellulosolvens 6	633697	PRJNA45821	45821	Terrabacteria group	Firmicutes	3.38466	48.2	chromosome:NZ_CM001487.1/CM001487.1	AEOA02	1	2894	2717	12/2/10	4/7/17	Chromosome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02256545	GCA_000183525.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/525/GCA_000183525.3_ASM18352v3	-	6
Nitrospirillum amazonense CBAmc	1441467	PRJNA232577	232577	Proteobacteria	Alphaproteobacteria	7.38239	67.4958	chromosome 1:NZ_CP022110.1/CP022110.1; chromosome 2:NZ_CP022111.1/CP022111.1; chromosome 3:NZ_CP022112.1/CP022112.1; chromosome 4:NZ_CP022113.1/CP022113.1	-	4	6231	6073	6/22/17	8/11/17	Complete Genome	Embrapa	SAMN02689882	GCA_000730165.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/165/GCA_000730165.2_ASM73016v2	-	CBAmC
Mycobacterium chimaera	222805	PRJEB15375	342977	Terrabacteria group	Actinobacteria	6.5934	67.4836	chromosome 1:NZ_LT703505.1/LT703505.1; plasmid 2:NZ_LT703506.1/LT703506.1; plasmid 3:NZ_LT703507.1/LT703507.1; plasmid 4:NZ_LT703508.1/LT703508.1; plasmid 5:NZ_LT703509.1/LT703509.1; plasmid 6:NZ_LT703510.1/LT703510.1	-	6	6314	6028	1/10/17	5/31/17	Complete Genome	UNIVERSITY OF MELBOURNE	SAMEA4521417	GCA_900116695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/695/GCA_900116695.1_ASM90011669v1	-	Mycobacterium chimaera MC045
Burkholderia thailandensis	57975	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	6.72985	67.4694	chromosome 1:CP023499.1; chromosome 2:CP023498.1	-	2	6423	5808	9/28/17	9/28/17	Complete Genome	US Food and Drug Administration 	SAMN07312470	GCA_002386205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/205/GCA_002386205.1_ASM238620v1	-	FDAARGOS_426
Mycoplasma ovipneumoniae NM2010	1446495	PRJNA234309	234309	Terrabacteria group	Tenericutes	1.08416	29.3	-	JAKV01	8	781	693	9/10/14	4/2/17	Scaffold	Inner Mongolia Agricultural University	SAMN02581959	GCA_000753815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/815/GCA_000753815.1_genomic_workbench	-	NM2010
Burkholderia thailandensis 34	1249664	PRJNA178704	178704	Proteobacteria	Betaproteobacteria	7.1202	67.4379	chromosome 1:NZ_CP010017.1/CP010017.1; chromosome 2:NZ_CP010018.1/CP010018.1; plasmid unnamed:NZ_CP010016.1/CP010016.1	-	3	6933	6257	3/20/15	4/10/17	Complete Genome	Los Alamos National Laboratory	SAMN02697330	GCA_000959605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/605/GCA_000959605.1_ASM95960v1	25931592	34
Mycobacterium sp. YC-RL4	1682113	PRJNA320914	320914	Terrabacteria group	Actinobacteria	6.05398	67.4249	chromosome:NZ_CP015596.1/CP015596.1; plasmid pMYC1:NZ_CP015597.1/CP015597.1	-	2	5836	5633	5/16/16	4/12/17	Complete Genome	Chinese Academy of Agricultural Scineces	SAMN04959083	GCA_001644575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/575/GCA_001644575.1_ASM164457v1	-	YC-RL4
gamma proteobacterium HIMB55	745014	PRJNA46495	46495	Proteobacteria	Gammaproteobacteria	2.73699	52.9	-	AGIF02	1	2515	2465	10/5/11	4/17/17	Contig	Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN00010579	GCA_000227505.4	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/505/GCA_000227505.4_ASM22750v4	22493201	HIMB55
Burkholderia gladioli BSR3	999541	PRJNA64503	64503	Proteobacteria	Betaproteobacteria	9.0523	67.4147	chromosome 1:NC_015381.1/CP002599.1; chromosome 2:NC_015376.1/CP002600.1; plasmid bgla_1p:NC_015382.1/CP002601.1; plasmid bgla_2p:NC_015377.1/CP002602.1; plasmid bgla_3p:NC_015378.1/CP002603.1; plasmid bgla_4p:NC_015383.1/CP002604.1	-	6	7938	7571	4/1/11	5/18/17	Complete Genome	"Creative Research Initiatives for Bacterial Communication, Seoul National University"	SAMN02603164	GCA_000194745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/745/GCA_000194745.1_ASM19474v1	21478339	BSR3
Mycobacterium chimaera	222805	PRJNA314007	314007	Terrabacteria group	Actinobacteria	6.53365	67.4029	chromosome:NZ_CP015267.1/CP015267.1; plasmid unnamed 1:NZ_CP015268.1/CP015268.1; plasmid unnamed 2:NZ_CP015269.1/CP015269.1; plasmid unnamed 3:NZ_CP015270.1/CP015270.1; plasmid unnamed 4:NZ_CP015271.1/CP015271.1	-	5	6093	5830	7/14/17	7/17/17	Complete Genome	Leibniz Institute DSMZ	SAMN04526974	GCA_002219245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/219/245/GCA_002219245.1_ASM221924v1	-	ZUERICH-2
Achromobacter denitrificans	32002	PRJNA383898	383898	Proteobacteria	Betaproteobacteria	6.9292	67.4	chromosome:NZ_CP020917.1/CP020917.1	-	1	6433	6293	6/22/17	6/24/17	Complete Genome	"Institute for Ecopreneurship (IEC), School of Life Sciences, University of Applied Sciences and Arts Northwestern Switzerland"	SAMN06819206	GCA_002205315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/315/GCA_002205315.1_ASM220531v1	-	PR1
delta proteobacterium NaphS2	88274	PRJNA46635	46635	Proteobacteria	delta/epsilon subdivisions	6.55472	49.8	-	ADZZ01	810	6681	5981	7/12/10	5/19/17	Contig	University of Massachusetts	SAMN02436561	GCA_000179315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/315/GCA_000179315.1_ASM17931v1	21124915	NaphS2
Stenotrophomonas maltophilia	40324	PRJNA357031	357031	Proteobacteria	Gammaproteobacteria	4.66334	67.4	chromosome:NZ_CP018756.1/CP018756.1	-	1	4203	4087	3/13/17	3/15/17	Complete Genome	Harvard University	SAMN06130959	GCA_002025605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/605/GCA_002025605.1_ASM202560v1	28275097	AA1
Mycobacterium litorale	758802	PRJNA374925	374925	Terrabacteria group	Actinobacteria	6.10371	67.4	chromosome:NZ_CP019882.1/CP019882.1	-	1	5818	5231	2/28/17	3/2/17	Complete Genome	Hunan Agricultural University	SAMN06339708	GCA_002007745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/745/GCA_002007745.1_ASM200774v1	-	F4
gamma proteobacterium HIMB30	751994	PRJNA47035	47035	Proteobacteria	Gammaproteobacteria	2.16887	49.9	-	AGIG01	36	2261	2202	10/5/11	4/17/17	Contig	Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN00011218	GCA_000227525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/525/GCA_000227525.2_ASM22752v2	22247531	HIMB30
Prevotella bryantii B14	752555	PRJNA47067	47067	FCB group	Bacteroidetes/Chlorobi group	3.59295	39.1	-	ADWO01	98	2968	2710	6/28/10	4/7/17	Contig	JCVI	SAMN02436639	GCA_000179055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/055/GCA_000179055.1_ASM17905v1	20585943	B14
Brevundimonas sp. DS20	1532555	PRJNA257504	257504	Proteobacteria	Alphaproteobacteria	3.47561	67.4	chromosome:NZ_CP012897.1/CP012897.1	-	1	3407	3279	10/13/15	4/11/17	Complete Genome	university of south carolina	SAMN04158389	GCA_001310255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/255/GCA_001310255.1_ASM131025v1	-	DS20
Achromobacter xylosoxidans	85698	PRJEB6403	251923	Proteobacteria	Betaproteobacteria	6.81318	67.4	chromosome 1:NZ_LN831029.1/LN831029.1	-	1	6235	6087	3/22/15	4/5/17	Complete Genome	SC	SAMEA2517358	GCA_001457475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/475/GCA_001457475.1_NCTC10807	-	NCTC10807
Deinococcus swuensis	1182571	PRJNA268296	268296	Terrabacteria group	Deinococcus-Thermus	3.53144	67.4	chromosome:NZ_CP010028.1/CP010028.1	-	1	3335	3217	12/9/14	4/9/17	Complete Genome	Kyungpook National University	SAMN03218061	GCA_000800395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/395/GCA_000800395.1_ASM80039v1	-	DY59
Mycobacterium smegmatis str. MC2 155	246196	PRJNA261003	261003	Terrabacteria group	Actinobacteria	6.98827	67.4	chromosome:NZ_CP009494.1/CP009494.1	-	1	6830	6661	10/22/14	4/2/17	Complete Genome	Indian Institute of Science	SAMN03068201	GCA_000767605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/605/GCA_000767605.1_ASM76760v1	25657281	MC2 155
Brevundimonas diminuta	293	PRJNA390478	390478	Proteobacteria	Alphaproteobacteria	3.38562	67.4	chromosome:NZ_CP021995.1/CP021995.1	-	1	3288	3187	6/22/17	6/24/17	Chromosome	CAAS	SAMN07236578	GCA_002205555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/555/GCA_002205555.1_ASM220555v1	-	BZC3
Microcoleus vaginatus FGP-2	756067	PRJNA47601	47601	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.69893	46	-	AFJC01	40	5514	5060	5/19/11	4/17/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713620	GCA_000214075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/075/GCA_000214075.2_ASM21407v1	21705610	FGP-2
Mycobacterium smegmatis	1772	PRJNA261003	261003	Terrabacteria group	Actinobacteria	6.98834	67.4	chromosome:NZ_CP009495.1/CP009495.1	-	1	6830	6660	10/22/14	4/2/17	Complete Genome	Indian Institute of Science	SAMN03068202	GCA_000767665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/665/GCA_000767665.1_ASM76766v1	25657281	INHR1
Mycobacterium smegmatis	1772	PRJNA261003	261003	Terrabacteria group	Actinobacteria	6.9883	67.4	chromosome:NZ_CP009496.1/CP009496.1	-	1	6830	6659	10/22/14	4/2/17	Complete Genome	Indian Institute of Science	SAMN03068203	GCA_000767705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/705/GCA_000767705.1_ASM76770v1	25657281	INHR2
Mycobacterium smegmatis str. MC2 155	246196	PRJNA38453	38453	Terrabacteria group	Actinobacteria	6.98821	67.4	chromosome:NC_018289.1/CP001663.1	-	1	6843	6676	8/3/12	5/18/17	Complete Genome	Institute of Genetics and Molecular and Cellular Biology	SAMN02603392	GCA_000283295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/295/GCA_000283295.1_ASM28329v1	"163,818,821,729,591,000,000,000"	MC2 155
Mycobacterium smegmatis str. MC2 155	246196	PRJNA92	92	Terrabacteria group	Actinobacteria	6.98821	67.4	chromosome:NC_008596.1/CP000480.1	-	1	6938	6717	11/20/06	8/3/16	Complete Genome	TIGR	SAMN02603982	GCA_000015005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/005/GCA_000015005.1_ASM1500v1	-	MC2 155
Succinivibrionaceae bacterium WG-1	758828	PRJNA48013	48013	Proteobacteria	Gammaproteobacteria	2.95262	32.3	-	AFAK01	43	2535	2088	8/5/11	4/17/17	Scaffold	CSIRO	SAMN02469692	GCA_000222855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/855/GCA_000222855.1_WG1_1.0	21719642	WG-1
Paracoccus aminovorans	34004	PRJEB8789	398125	Proteobacteria	Alphaproteobacteria	4.03813	67.3846	chromosome I:LN832559.1; plasmid II:LN832560.1; plasmid III:LN832561.1; plasmid IV:LN832562.1	-	4	3862	3802	8/15/17	8/15/17	Complete Genome	CEBITEC	SAMEA3320986	GCA_900005615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/005/615/GCA_900005615.1_JCM7685	-	-
[Clostridium] clostridioforme 2_1_49FAA	742735	PRJNA46389	46389	Terrabacteria group	Firmicutes	5.50047	48.9	-	ADLL01	69	5448	4997	11/2/11	5/18/17	Scaffold	Broad Institute	SAMN02463854	GCA_000234155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/155/GCA_000234155.1_Clos_clos_2_1_49FAA_V1	-	2_1_49FAA
Slackia piriformis YIT 12062	742818	PRJNA46425	46425	Terrabacteria group	Actinobacteria	2.11933	57.6	-	ADMD01	5	1866	1775	9/13/12	4/17/17	Scaffold	Broad Institute	SAMN02595396	GCA_000296445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/445/GCA_000296445.1_Slac_piri_YIT_12062_V1	-	YIT 12062
Odoribacter laneus YIT 12061	742817	PRJNA46423	46423	FCB group	Bacteroidetes/Chlorobi group	3.77301	40.6	-	ADMC01	9	3165	3028	1/19/12	4/17/17	Scaffold	Broad Institute	SAMN02463867	GCA_000243215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/215/GCA_000243215.1_Odor_lane_YIT_12061_V1	-	YIT 12061
Megamonas funiformis YIT 11815	742816	PRJNA46421	46421	Terrabacteria group	Firmicutes	2.56251	31.6	-	ADMB01	13	2525	2398	2/3/12	4/17/17	Scaffold	Broad Institute	SAMN02463866	GCA_000245775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/775/GCA_000245775.1_Mega_funi_YIT_11815_V1	-	YIT 11815
Fusobacterium necrophorum subsp. funduliforme ATCC 51357	1095747	PRJNA75137	75137	Fusobacteria	Fusobacteriia	2.1108	34.9	-	AJSY01	45	2039	1956	5/10/12	3/30/17	Contig	J. Craig Venter Institute	SAMN00761801	GCA_000262225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/225/GCA_000262225.1_ASM26222v1	-	ATCC 51357
Caulobacter sp. K31	366602	PRJNA16306	16306	Proteobacteria	Alphaproteobacteria	5.8894	67.3835	chromosome:NC_010338.1/CP000927.1; plasmid pCAUL01:NC_010335.1/CP000928.1; plasmid pCAUL02:NC_010333.1/CP000929.1	-	3	5510	5378	2/7/08	5/18/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598364	GCA_000019145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/145/GCA_000019145.1_ASM1914v1	-	K31
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.46341	67.3817	chromosome 1:NZ_CP013463.1/CP013463.1; chromosome 2:NZ_CP013464.1/CP013464.1; chromosome 3:NZ_CP013465.1/CP013465.1; plasmid pMSMB1471:NZ_CP013462.1/CP013462.1	-	4	6778	6491	9/2/16	3/28/17	Complete Genome	Northern Arizona University	SAMN03449682	GCA_001718975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/975/GCA_001718975.1_ASM171897v1	-	MSMB1471WGS
Selenomonas artemidis DSM 19719	1123249	PRJNA195808	195808	Terrabacteria group	Firmicutes	2.3506	56.8	-	AUFU01	35	2298	2159	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440643	GCA_000426665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/665/GCA_000426665.1_ASM42666v1	-	DSM 19719
Treponema phagedenis 4A	1306407	PRJNA193309	193309	Spirochaetes	Spirochaetia	3.25077	40	-	AQCF01	38	2916	2723	1/7/14	4/9/17	Contig	USDA-ARS	SAMN01983889	GCA_000513775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/775/GCA_000513775.1_ASM51377v1	24304812	4A
[Clostridium] citroniae WAL-17108	742733	PRJNA46385	46385	Terrabacteria group	Firmicutes	6.64738	48.9	-	ADLJ01	41	6169	5893	10/31/11	5/18/17	Scaffold	Broad Institute	SAMN02463853	GCA_000233455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/455/GCA_000233455.1_Clos_citr_WAL_17108_V1	-	WAL-17108
Bacteroides oleiciplenus YIT 12058	742727	PRJNA46377	46377	FCB group	Bacteroidetes/Chlorobi group	7.08773	43.5	-	ADLF01	15	5536	5348	11/27/12	5/18/17	Scaffold	Broad Institute	SAMN02463851	GCA_000315485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/485/GCA_000315485.1_Bact_olei_YIT_12058_V1	-	YIT 12058
Barnesiella intestinihominis YIT 11860	742726	PRJNA46375	46375	FCB group	Bacteroidetes/Chlorobi group	3.44391	43.9	-	ADLE01	5	2834	2729	9/12/12	6/12/17	Scaffold	Broad Institute	SAMN02595395	GCA_000296465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/465/GCA_000296465.1_Barn_inte_YIT_11860_V1	-	YIT 11860
Alistipes indistinctus YIT 12060	742725	PRJNA46373	46373	FCB group	Bacteroidetes/Chlorobi group	2.85543	54.7	-	ADLD01	6	2381	2303	10/19/11	4/17/17	Scaffold	Broad Institute	SAMN02463850	GCA_000231275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/275/GCA_000231275.1_Alis_indi_YIT_V1	-	YIT 12060
Lachnospiraceae bacterium 2_1_46FAA	742723	PRJNA46369	46369	Terrabacteria group	Firmicutes	2.21903	38.8	-	ADLB02	1	2125	2021	4/25/11	4/17/17	Scaffold	Broad Institute	SAMN02463849	GCA_000209385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/209/385/GCA_000209385.2_Lach_bact_2_1_46_FAA_V2	-	2_1_46FAA
Sutterella wadsworthensis 2_1_59BFAA	742823	PRJNA46431	46431	Proteobacteria	Betaproteobacteria	2.72587	61.3	-	ADMG01	11	2435	2275	9/17/12	4/8/17	Scaffold	Broad Institute	SAMN02463870	GCA_000297775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/775/GCA_000297775.1_Sutt_wads_2_1_59BFAA_V1	-	2_1_59BFAA
Enterococcus saccharolyticus subsp. saccharolyticus ATCC 43076	1139996	PRJNA191890	191890	Terrabacteria group	Firmicutes	2.60404	36.9	-	ASWN01	2	2616	2540	5/31/13	4/8/17	Scaffold	Broad Institute	SAMN02596896	GCA_000407285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/285/GCA_000407285.1_Ente_sacc_ATCC43076_V2	-	ATCC 43076
Dysgonomonas gadei ATCC BAA-286	742766	PRJNA46409	46409	FCB group	Bacteroidetes/Chlorobi group	5.17609	39.6	-	ADLV01	25	4132	3986	5/13/11	6/12/17	Scaffold	Broad Institute	SAMN02463862	GCA_000213555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/555/GCA_000213555.1_Dysg_gade_ATCC_V1	-	ATCC BAA-286
Dialister succinatiphilus YIT 11850	742743	PRJNA46405	46405	Terrabacteria group	Firmicutes	2.49988	50.4	-	ADLT01	14	2280	2112	1/11/12	4/17/17	Scaffold	Broad Institute	SAMN02463860	GCA_000242435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/435/GCA_000242435.1_Dial_succ_YIT_11850_V1	-	YIT 11850
Collinsella tanakaei YIT 12063	742742	PRJNA46403	46403	Terrabacteria group	Actinobacteria	2.49208	60.2	-	ADLS01	20	2246	2119	9/9/11	4/17/17	Scaffold	Broad Institute	SAMN02463859	GCA_000225705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/705/GCA_000225705.1_Coll_tana_YIT_12063_V1	-	YIT 12063
Xanthobacter autotrophicus Py2	78245	PRJNA15756	15756	Proteobacteria	Alphaproteobacteria	5.6251	67.3763	chromosome:NC_009720.1/CP000781.1; plasmid pXAUT01:NC_009717.1/CP000782.1	-	2	5207	5034	7/30/07	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598342	GCA_000017645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/645/GCA_000017645.1_ASM1764v1	-	Py2
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.68485	67.3186	chromosome 1:NZ_CP013420.1/CP013420.1; chromosome 2:NZ_CP013422.1/CP013422.1; chromosome 3:NZ_CP013421.1/CP013421.1	-	3	6093	5597	9/2/16	3/28/17	Complete Genome	Northern Arizona University	SAMN03449272	GCA_001718695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/695/GCA_001718695.1_ASM171869v1	-	MSMB0783
Burkholderia cenocepacia H111	1055524	PRJNA69823	69823	Proteobacteria	Betaproteobacteria	7.71489	67.3149	chromosome 1:NZ_HG938370.1/HG938370.1; chromosome 2:NZ_HG938371.1/HG938371.2; chromosome 3:NZ_HG938372.1/HG938372.1	-	3	7222	6955	3/5/14	3/26/17	Complete Genome	University of Zurich	SAMEA3138403	GCA_000236215.4	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/215/GCA_000236215.4_ASM23621v4	24723723	H111
Methylobacter tundripaludum SV96	697282	PRJNA48297	48297	Proteobacteria	Gammaproteobacteria	4.84833	49.5	-	AEGW02	3	4353	4128	9/27/10	5/19/17	Scaffold	US DOE Joint Genome Institute (JGI-PGF)	SAMN00102804	GCA_000190755.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/755/GCA_000190755.3_ASM19075v3	-	SV96
Bacteroides fluxus YIT 12057	763034	PRJNA48511	48511	FCB group	Bacteroidetes/Chlorobi group	4.33072	45.6	-	AFBN01	97	3642	3439	4/7/11	6/15/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189096	GCA_000195635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/635/GCA_000195635.1_ASM19563v1	-	YIT 12057
Nocardioidaceae bacterium Broad-1	408672	PRJNA48513	48513	Terrabacteria group	Actinobacteria	5.93211	69.1	-	ADVI01	16	5796	5631	3/11/11	2/7/14	Scaffold	Broad Institute	SAMN02595397	GCA_000192415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/415/GCA_000192415.1_Noca_bact_Broad_1_V1	-	Broad-1
Burkholderia sp. MSMB0852	1637841	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.08117	67.3096	chromosome 1:NZ_CP013424.1/CP013424.1; chromosome 2:NZ_CP013425.1/CP013425.1; plasmid pMSMB0852:NZ_CP013423.1/CP013423.1	-	3	6758	6195	9/2/16	5/3/17	Complete Genome	Northern Arizona University	SAMN03449280	GCA_001524625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/625/GCA_001524625.2_ASM152462v2	-	MSMB0852
Burkholderia ubonensis MSMB22	1249668	PRJNA239258	239258	Proteobacteria	Betaproteobacteria	7.18907	67.3091	chromosome I:NZ_CP009488.1/CP009488.1; chromosome II:NZ_CP009486.1/CP009486.1; chromosome III:NZ_CP009487.1/CP009487.1	-	3	6473	6127	3/20/15	3/26/17	Complete Genome	Los Alamos National Laboratory	SAMN03072629	GCA_000959245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/245/GCA_000959245.1_ASM95924v1	25931592	MSMB22
Dysgonomonas mossii DSM 22836	742767	PRJNA46411	46411	FCB group	Bacteroidetes/Chlorobi group	3.95437	37.5	-	ADLW01	28	3396	3307	5/13/11	6/12/17	Scaffold	Broad Institute	SAMN02463863	GCA_000213575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/575/GCA_000213575.1_Dysg_moss_DSM_V1	-	DSM 22836
Mycobacterium shigaense	722731	PRJDB5818	391138	Terrabacteria group	Actinobacteria	5.23266	67.3	chromosome:AP018164.1	-	1	4984	4920	6/15/17	6/15/17	Complete Genome	National Institute of Infectious Diseases	SAMD00081394	GCA_002356315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/315/GCA_002356315.1_ASM235631v1	-	UN-152
Parasutterella excrementihominis YIT 11859	762966	PRJNA48497	48497	Proteobacteria	Betaproteobacteria	2.8317	48.1	-	AFBP01	93	2584	2486	4/19/11	6/15/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189152	GCA_000205025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/205/025/GCA_000205025.1_ASM20502v1	-	YIT 11859
Sutterella parvirubra YIT 11816	762967	PRJNA48499	48499	Proteobacteria	Betaproteobacteria	2.3769	65.2	-	AFBQ01	188	2041	1769	2/27/12	6/15/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189160	GCA_000250875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/875/GCA_000250875.1_ASM25087v1	-	YIT 11816
Paraprevotella clara YIT 11840	762968	PRJNA48501	48501	FCB group	Bacteroidetes/Chlorobi group	4.23377	48.2	-	AFFY01	166	3484	3365	11/4/11	6/15/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189150	GCA_000233955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/955/GCA_000233955.1_ASM23395v1	-	YIT 11840
Paraprevotella xylaniphila YIT 11841	762982	PRJNA48503	48503	FCB group	Bacteroidetes/Chlorobi group	3.78981	48.5	-	AFBR01	87	3115	2893	4/19/11	6/15/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189151	GCA_000205165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/205/165/GCA_000205165.1_ASM20516v1	-	YIT 11841
Phascolarctobacterium succinatutens YIT 12067	626939	PRJNA48505	48505	Terrabacteria group	Firmicutes	2.12195	47.6	-	AEVN01	96	2052	1959	2/7/11	6/15/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189153	GCA_000188175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/175/GCA_000188175.1_ASM18817v1	-	YIT 12067
Succinatimonas hippei YIT 12066	762983	PRJNA48507	48507	Proteobacteria	Gammaproteobacteria	2.30655	40.3	-	AEVO01	141	2083	1989	2/7/11	4/17/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189159	GCA_000188195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/195/GCA_000188195.1_ASM18819v1	-	YIT 12066
Bacteroides clarus YIT 12056	762984	PRJNA48509	48509	FCB group	Bacteroidetes/Chlorobi group	3.74717	45.4	-	AFBM01	22	3084	2984	4/7/11	6/15/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189095	GCA_000195615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/615/GCA_000195615.1_ASM19561v1	-	YIT 12056
Achromobacter piechaudii ATCC 43553	742159	PRJNA46343	46343	Proteobacteria	Betaproteobacteria	6.15444	64.5	-	ADMS01	26	5704	5332	4/1/10	5/18/17	Scaffold	Baylor College of Medicine	SAMN00120564	GCA_000164035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/035/GCA_000164035.1_ASM16403v1	-	ATCC 43553
Streptococcus downei F0415	904293	PRJNA53567	53567	Terrabacteria group	Firmicutes	2.23942	43.4	-	AEKN01	17	2270	2204	11/4/10	9/20/13	Contig	J. Craig Venter Institute	SAMN00115114	GCA_000180055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/180/055/GCA_000180055.1_ASM18005v1	-	F0415
Streptococcus urinalis 2285-97	764291	PRJNA48551	48551	Terrabacteria group	Firmicutes	2.13043	34.2	-	AEUZ02	1	2232	2086	2/4/11	4/7/17	Contig	JCVI	SAMN02436559	GCA_000188055.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/055/GCA_000188055.3_ASM18805v3	24625962	2285-97
Streptococcus macacae NCTC 11558	764298	PRJNA48553	48553	Terrabacteria group	Firmicutes	1.91698	37.8	-	AEUW02	1	1886	1755	2/4/11	4/7/17	Contig	JCVI	SAMN02436328	GCA_000187995.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/995/GCA_000187995.3_ASM18799v3	24625962	NCTC 11558
Streptococcus ictaluri 707-05	764299	PRJNA48555	48555	Terrabacteria group	Firmicutes	2.2344	38.2	-	AEUX02	8	2299	1950	2/4/11	4/17/17	Contig	JCVI	SAMN02436329	GCA_000188015.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/015/GCA_000188015.3_ASM18801v3	24625962	707-05
Propionibacterium freudenreichii	1744	PRJNA352541	352541	Terrabacteria group	Actinobacteria	2.63091	67.3	chromosome:NZ_CP018002.1/CP018002.1	-	1	2338	2223	5/2/17	5/6/17	Complete Genome	University of Florida	SAMN05982163	GCA_002117425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/425/GCA_002117425.1_ASM211742v1	-	P.UF1
Oscillochloris trichoides DG-6	765420	PRJNA48647	48647	Terrabacteria group	Chloroflexi	4.37308	59.1	-	ADVR01	7	3535	3386	10/8/10	4/17/17	Scaffold	Center Bioengineering RAS	SAMN02469416	GCA_000152145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/145/GCA_000152145.1_ASM15214v1	21037015	DG-6
Thauera chlorobenzoica	96773	PRJNA340223	340223	Proteobacteria	Betaproteobacteria	3.73551	67.3	chromosome:NZ_CP018839.1/CP018839.1	-	1	3494	3340	12/27/16	4/17/17	Complete Genome	Friedrich Schiller University Jena	SAMN06117593	GCA_001922305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/305/GCA_001922305.1_ASM192230v1	-	3CB1
Bordetella bronchialis	463025	PRJNA318508	318508	Proteobacteria	Betaproteobacteria	5.87876	67.3	chromosome:NZ_CP016170.1/CP016170.1	-	1	5226	5084	6/27/16	4/13/17	Complete Genome	University of Michigan	SAMN05257177	GCA_001676705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/705/GCA_001676705.1_ASM167670v1	-	AU3182
Bordetella bronchialis	463025	PRJNA318508	318508	Proteobacteria	Betaproteobacteria	5.96692	67.3	chromosome:NZ_CP016171.1/CP016171.1	-	1	5348	5205	6/27/16	4/13/17	Complete Genome	University of Michigan	SAMN05257179	GCA_001676745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/745/GCA_001676745.1_ASM167674v1	-	AU17976
Paenibacillus curdlanolyticus YK9	717606	PRJNA49287	49287	Terrabacteria group	Firmicutes	5.45278	51.9	-	AEDD01	40	4873	4669	8/20/10	5/19/17	Scaffold	US DOE Joint Genome Institute (JGI-PGF)	SAMN00015377	GCA_000179615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/615/GCA_000179615.1_ASM17961v1	-	YK9
Mycobacterium smegmatis	1772	PRJEB6403	251923	Terrabacteria group	Actinobacteria	6.98327	67.3	chromosome 1:NZ_LN831039.1/LN831039.1	-	1	6813	6596	3/22/15	4/5/17	Complete Genome	SC	SAMEA2517361	GCA_001457595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/595/GCA_001457595.1_NCTC8159	-	NCTC8159
Propionibacterium freudenreichii subsp. freudenreichii	66712	PRJNA269789	269789	Terrabacteria group	Actinobacteria	2.64917	67.3	chromosome:NZ_CP010341.1/CP010341.1	-	1	2333	2213	3/4/15	4/3/17	Complete Genome	University of Helsinki	SAMN03263638	GCA_000940845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/845/GCA_000940845.1_ASM94084v1	26500719	DSM 20271
Ilumatobacter coccineus YM16-304	1313172	PRJDA63297	63297	Terrabacteria group	Actinobacteria	4.83018	67.3	chromosome:NC_020520.1/AP012057.1	-	1	4351	4203	3/16/13	4/17/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00060985	GCA_000348785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/785/GCA_000348785.1_ASM34878v1	23524358	YM16-304
Microlunatus phosphovorus NM-1	1032480	PRJNA66879	66879	Terrabacteria group	Actinobacteria	5.68312	67.3	chromosome:NC_015635.1/AP012204.1	-	1	5201	5049	6/2/11	4/17/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00061117	GCA_000270245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/245/GCA_000270245.1_ASM27024v1	-	NM-1
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1	754252	PRJEA46291	46291	Terrabacteria group	Actinobacteria	2.61638	67.3	chromosome:NC_014215.1/FN806773.1	-	1	2317	2187	5/26/10	3/30/17	Complete Genome	"I.N.R.A., French National Institute for Agricultural Research"	SAMEA2272304	GCA_000091725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/091/725/GCA_000091725.1_ASM9172v1	20668525	CIRM-B1AI
Saccharomonospora viridis DSM 43017	471857	PRJNA20835	20835	Terrabacteria group	Actinobacteria	4.30835	67.3	chromosome:NC_013159.1/CP001683.1	-	1	3945	3804	8/26/09	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598440	GCA_000023865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/865/GCA_000023865.1_ASM2386v1	21304650	DSM 43017
Azorhizobium caulinodans ORS 571	438753	PRJDA19267	19267	Proteobacteria	Alphaproteobacteria	5.36977	67.3	chromosome:NC_009937.1/AP009384.1	-	1	4892	4719	10/17/07	4/7/17	Complete Genome	University of Tokyo	SAMD00060925	GCA_000010525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/525/GCA_000010525.1_ASM1052v1	"177,208,181,852,275,000,000,000"	ORS 571
Burkholderia pseudomultivorans	1207504	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.95679	67.2873	chromosome 1:NZ_CP013378.1/CP013378.1; chromosome 2:NZ_CP013377.1/CP013377.1; plasmid pINT23:NZ_CP013379.1/CP013379.1	-	3	7257	6944	9/2/16	4/5/17	Complete Genome	Northern Arizona University	SAMN03449185	GCA_001718415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/415/GCA_001718415.1_ASM171841v1	-	SUB-INT23-BP2
Stomatobaculum longum	796942	PRJNA49875	49875	Terrabacteria group	Firmicutes	2.31363	55	-	AGEL01	5	2179	2029	1/10/12	4/17/17	Scaffold	Broad Institute	SAMN02463871	GCA_000242235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/235/GCA_000242235.1_Lach_bact_ACC2_V1	-	ACC2
Scardovia wiggsiae F0424	857290	PRJNA49881	49881	Terrabacteria group	Actinobacteria	1.55082	52.9	-	AKCI01	1	1294	1226	6/15/12	4/7/17	Contig	Broad Institute	SAMN02463874	GCA_000269605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/605/GCA_000269605.1_PB_Scar_wigg_F0424_V1	22829535	F0424
Peptoanaerobacter stomatis	796937	PRJNA49889	49889	Terrabacteria group	Firmicutes	2.32516	30.2	-	AFZF02	3	2021	1915	12/14/11	4/8/17	Scaffold	Broad Institute	SAMN02463878	GCA_000238095.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/095/GCA_000238095.2_Euba_bact_CM2_V2	-	CM2
Caloramator australicus RC3	857293	PRJNA49895	49895	Terrabacteria group	Firmicutes	2.63845	32.8	-	CAKP01	161	2745	2497	7/17/12	4/17/17	Contig	"Microbial Gene Research and Resources Facility, Griffith University"	SAMEA3138419	GCA_000297115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/115/GCA_000297115.1_ASM29711v1	21421756	RC3
Burkholderia seminalis	488731	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.64894	67.2738	chromosome 1:NZ_CP013398.1/CP013398.1; chromosome 2:NZ_CP013400.1/CP013400.1; chromosome 3:NZ_CP013399.1/CP013399.1	-	3	7091	6765	9/2/16	4/13/17	Complete Genome	Northern Arizona University	SAMN03449243	GCA_001718535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/535/GCA_001718535.1_ASM171853v1	-	FL-5-4-10-S1-D7
Corynebacterium variabile	1727	PRJNA238534	238534	Terrabacteria group	Actinobacteria	4.70859	71.7	-	JOIN01	29	4327	4175	7/2/14	4/9/17	Contig	University of Illinois	SAMN02645508	GCA_000720035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/035/GCA_000720035.1_ASM72003v1	-	NRRL B-4201
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.81528	67.2663	chromosome 1:NZ_CP013393.1/CP013393.1; chromosome 2:NZ_CP013394.1/CP013394.1; chromosome 3:NZ_CP013395.1/CP013395.1	-	3	6169	5842	9/2/16	4/5/17	Complete Genome	Northern Arizona University	SAMN03449233	GCA_001718495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/495/GCA_001718495.1_ASM171849v1	-	FL-2-3-30-S1-D0
Candidatus Nitrosopumilus salaria BD31	859350	PRJNA50075	50075	TACK group	Thaumarchaeota	1.57296	33.8	-	AEXL02	171	1893	1681	1/17/12	4/8/17	Contig	Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN00016669	GCA_000242875.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/875/GCA_000242875.3_ASM24287v3	22461555	BD31
Burkholderia cenocepacia	95486	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.7806	67.2443	chromosome 1:NZ_CP013450.1/CP013450.1; chromosome 2:NZ_CP013452.1/CP013452.1; chromosome 3:NZ_CP013451.1/CP013451.1	-	3	7312	7039	9/2/16	3/28/17	Complete Genome	Northern Arizona University	SAMN03449602	GCA_001718895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/895/GCA_001718895.1_ASM171889v1	-	MSMB384WGS
Sphingomonas sp. NIC1	1961362	PRJNA320527	320527	Proteobacteria	Alphaproteobacteria	3.66056	67.2344	chromosome:NZ_CP015521.1/CP015521.1; plasmid unnamed1:NZ_CP015522.1/CP015522.1; plasmid unnamed2:NZ_CP015523.1/CP015523.1	-	3	3475	3295	5/6/16	3/9/17	Complete Genome	Shanghai Jiaotong University	SAMN04942644	GCA_001638925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/925/GCA_001638925.1_ASM163892v1	-	NIC1
Burkholderia multivorans ATCC BAA-247	985079	PRJNA264318	264318	Proteobacteria	Betaproteobacteria	6.32275	67.2008	chromosome 1:NZ_CP009832.1/CP009832.1; chromosome 2:NZ_CP009831.1/CP009831.1; chromosome 3:NZ_CP009830.1/CP009830.1	-	3	6016	5787	3/20/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03140189	GCA_000959525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/525/GCA_000959525.1_ASM95952v1	25931592	ATCC BAA-247
Prevotella histicola JCM 15637 = DNF00424	1236504	PRJDB591	243166	FCB group	Bacteroidetes/Chlorobi group	2.94981	41.2	-	BAJX01	55	2376	1998	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00008973	GCA_000613925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/925/GCA_000613925.1_ASM61392v1	-	JCM 15637
Caulobacter vibrioides	155892	PRJNA386178	386178	Proteobacteria	Alphaproteobacteria	4.12362	67.2	chromosome:NZ_CP023313.1/CP023313.1	-	1	4001	3815	9/18/17	9/20/17	Complete Genome	University of South Carolina	SAMN06927532	GCA_002310295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/295/GCA_002310295.1_ASM231029v1	-	CB2
Haladaptatus paucihalophilus DX253	797209	PRJNA170085	170085	Euryarchaeota	Halobacteria	4.31754	61.8	-	AQXI01	6	4319	4212	4/20/13	5/18/17	Contig	DOE Joint Genome Institute	SAMN02441396	GCA_000376445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/445/GCA_000376445.1_ASM37644v1	-	DX253
[Eubacterium] yurii subsp. margaretiae ATCC 43715	864565	PRJNA50511	50511	Terrabacteria group	Firmicutes	2.51103	32.6	-	AEES01	14	2106	2020	8/25/10	4/7/17	Scaffold	Baylor College of Medicine	SAMN00120458	GCA_000146855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/146/855/GCA_000146855.1_ASM14685v1	-	ATCC 43715
Caulobacter vibrioides	155892	PRJNA386178	386178	Proteobacteria	Alphaproteobacteria	4.13727	67.2	chromosome:NZ_CP023314.1/CP023314.1	-	1	4031	3912	9/18/17	9/20/17	Complete Genome	University of South Carolina	SAMN06927531	GCA_002310455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/455/GCA_002310455.1_ASM231045v1	-	CB1
Propionibacterium freudenreichii subsp. shermanii	1752	PRJEB12148	318994	Terrabacteria group	Actinobacteria	2.67504	67.2	chromosome I:NZ_LN997841.1/LN997841.1	-	1	2374	2251	4/19/16	4/5/17	Complete Genome	"Institute of Biotechnology, Univerity of Helsinki"	SAMEA3716040	GCA_900016155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/155/GCA_900016155.1_PFREUDJS1	-	-
Luteitalea pratensis	1855912	PRJNA314952	314952	Acidobacteria	unclassified Acidobacteria	7.48031	67.2	chromosome:CP015136.1	-	1	6293	6200	4/12/16	6/7/16	Complete Genome	Leibniz Institute DSMZ	SAMN04546182	GCA_001618865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/865/GCA_001618865.1_ASM161886v1	-	DSM 100886; HEG_-6_39
Caulobacter crescentus NA1000	565050	PRJNA32027	32027	Proteobacteria	Alphaproteobacteria	4.04293	67.2	chromosome:NC_011916.1/CP001340.1	-	1	4085	3886	1/16/09	11/15/16	Complete Genome	University of Chicago	SAMN02604151	GCA_000022005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/005/GCA_000022005.1_ASM2200v1	20472802	NA1000
Thermaerobacter subterraneus DSM 13965	867903	PRJNA50747	50747	Terrabacteria group	Firmicutes	2.88874	72	-	AENY02	2	2426	2302	12/2/10	4/17/17	Scaffold	US DOE Joint Genome Institute (JGI-PGF)	SAMN00116773	GCA_000183545.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/545/GCA_000183545.3_ASM18354v3	-	DSM 13965
Caulobacter crescentus CB15	190650	PRJNA298	298	Proteobacteria	Alphaproteobacteria	4.01695	67.2	chromosome:NC_002696.2/AE005673.1	-	1	3819	3737	3/21/01	8/3/16	Complete Genome	TIGR	SAMN02604005	GCA_000006905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/006/905/GCA_000006905.1_ASM690v1	"112,596,471,682,958,000,000,000"	CB15
Rhodococcus opacus PD630	543736	PRJNA178618	178618	Terrabacteria group	Actinobacteria	9.16903	67.1923	chromosome:NZ_CP003949.1/CP003949.1; plasmid 1:NZ_CP003950.1/CP003950.1; plasmid 2:NZ_CP003951.1/CP003951.1; plasmid 3:NZ_CP003952.1/CP003952.1; plasmid 4:NZ_CP003953.1/CP003953.1; plasmid 5:NZ_CP003954.1/CP003954.1; plasmid 6:NZ_CP003955.1/CP003955.1; plasmid 7:NZ_CP003956.1/CP003956.1; plasmid 8:NZ_CP003957.1/CP003957.1; plasmid 9:NZ_CP003958.1/CP003958.1	-	10	8402	7903	2/28/14	4/2/17	Complete Genome	"Institue of Biophysics,Chinese Academy of Sciences"	SAMN03081444	GCA_000599545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/545/GCA_000599545.1_ASM59954v1	-	PD630
Prevotella disiens JCM 6334 = ATCC 29426	1235811	PRJDB558	243139	FCB group	Bacteroidetes/Chlorobi group	2.79713	39.9	-	BAIS01	187	2455	1985	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00010713	GCA_000613345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/345/GCA_000613345.1_ASM61334v1	-	JCM 6334
Peptoniphilus duerdenii ATCC BAA-1640	862517	PRJNA50529	50529	Terrabacteria group	Firmicutes	2.12484	34.5	-	AEEH01	16	1956	1884	8/23/10	4/17/17	Scaffold	Baylor College of Medicine	SAMN00117215	GCA_000146345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/146/345/GCA_000146345.1_ASM14634v1	-	ATCC BAA-1640
Prevotella marshii DSM 16973 = JCM 13450	862515	PRJNA50531	50531	FCB group	Bacteroidetes/Chlorobi group	2.55936	47.5	-	AEEI01	11	2183	2047	8/20/10	4/7/17	Scaffold	Baylor College of Medicine	SAMN00117235	GCA_000146675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/146/675/GCA_000146675.1_ASM14667v1	-	DSM 16973
Dialister micraerophilus DSM 19965	888062	PRJNA53029	53029	Terrabacteria group	Firmicutes	1.28184	35.6	-	AFBB01	7	1233	1145	4/4/11	4/7/17	Scaffold	Baylor College of Medicine	SAMN00260258	GCA_000194985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/985/GCA_000194985.1_ASM19498v1	-	DSM 19965
Burkholderia sp. KJ006	416344	PRJNA79219	79219	Proteobacteria	Betaproteobacteria	6.62991	67.1891	chromosome 1:NC_017920.1/CP003514.1; chromosome 2:NC_017921.1/CP003515.1; chromosome 3:NC_017922.1/CP003516.1; plasmid pKJ006:NC_017923.1/CP003517.1	-	4	6012	5699	5/14/12	5/18/17	Complete Genome	Korea Research Institute of Bioscience and Biotechnology	SAMN02603481	GCA_000262695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/695/GCA_000262695.1_ASM26269v1	22843575	KJ006
Variovorax paradoxus B4	1246301	PRJNA178088	178088	Proteobacteria	Betaproteobacteria	7.14852	67.1432	chromosome 1:NC_022247.1/CP003911.1; chromosome 2:NC_022234.1/CP003912.1	-	2	6778	6565	8/30/13	4/2/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02603275	GCA_000463015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/015/GCA_000463015.1_ASM46301v1	-	B4
Vibrio ichthyoenteri ATCC 700023	870968	PRJNA51217	51217	Proteobacteria	Gammaproteobacteria	4.64109	44.4	-	AFWF01	326	4386	4093	8/4/11	5/19/17	Contig	FDA	SAMN02951902	GCA_000222605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/605/GCA_000222605.2_ASM22260v1	21930677	ATCC 700023
Streptococcus infantis ATCC 700779	889204	PRJNA53205	53205	Terrabacteria group	Firmicutes	1.90598	39.1	-	AEVD01	10	1938	1859	2/1/11	3/30/17	Scaffold	Baylor College of Medicine	SAMN00216972	GCA_000187465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/465/GCA_000187465.1_ASM18746v1	-	ATCC 700779
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.6345	67.1419	chromosome 1:NZ_CP019674.1/CP019674.1; chromosome 2:NZ_CP019672.1/CP019672.1; chromosome 3:NZ_CP019673.1/CP019673.1; plasmid unnamed:NZ_CP019671.1/CP019671.1	-	4	7105	6852	2/15/17	3/29/17	Complete Genome	University of British Columbia	SAMN05001912	GCA_001999885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/885/GCA_001999885.1_ASM199988v1	-	VC12308
Burkholderia sp. Bp5365	1740162	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.28781	67.1361	chromosome 1:NZ_CP013380.1/CP013380.1; chromosome 2:NZ_CP013382.1/CP013382.1; plasmid pMSMB43:NZ_CP013381.1/CP013381.1	-	3	6960	6365	1/12/16	4/11/17	Complete Genome	Northern Arizona University	SAMN04196784	GCA_001513745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/745/GCA_001513745.1_ASM151374v1	-	MSMB43
Burkholderia sp. 2002721687	1468409	PRJNA239255	239255	Proteobacteria	Betaproteobacteria	7.28582	67.1361	chromosome I:NZ_CP009549.1/CP009549.1; chromosome II:NZ_CP009548.1/CP009548.1; plasmid pBTU:NZ_CP009547.1/CP009547.1	-	3	6952	6336	3/20/15	4/10/17	Complete Genome	Los Alamos National Laboratory	SAMN03023794	GCA_000959325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/325/GCA_000959325.1_ASM95932v1	25931592	2002721687
Prevotella oralis ATCC 33269	873533	PRJNA51495	51495	FCB group	Bacteroidetes/Chlorobi group	2.83954	44.5	-	AEPE02	4	2334	2249	12/21/10	4/7/17	Scaffold	Baylor College of Medicine	SAMN00216885	GCA_000185145.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/145/GCA_000185145.2_ASM18514v2	-	ATCC 33269
Burkholderia metallica	488729	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.42424	67.1235	chromosome 1:NZ_CP013401.1/CP013401.1; chromosome 2:NZ_CP013403.1/CP013403.1; chromosome 3:NZ_CP013402.1/CP013402.1	-	3	6827	6491	9/2/16	4/17/17	Complete Genome	Northern Arizona University	SAMN03449247	GCA_001718555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/555/GCA_001718555.1_ASM171855v1	-	FL-6-5-30-S1-D7
gamma proteobacterium IMCC2047	434085	PRJNA51617	51617	Proteobacteria	Gammaproteobacteria	2.23402	48.6	-	AEGL01	815	2284	2263	4/27/11	1/8/14	Contig	Inha University	SAMN02469923	GCA_000211335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/211/335/GCA_000211335.2_ASM21133v1	21602327	IMCC2047
Polymorphum gilvum SL003B-26A1	991905	PRJNA63293	63293	Proteobacteria	Alphaproteobacteria	4.71896	67.1174	chromosome:NC_015259.1/CP002568.1; plasmid pSL003B:NC_015258.1/CP002569.1	-	2	4466	4356	3/18/11	5/19/17	Complete Genome	"College of Engineering, Peking University"	SAMN02603150	GCA_000192745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/745/GCA_000192745.1_ASM19274v1	21478361	SL003B-26A1
Sphingomonas sp. DC-6	1283312	PRJNA246557	246557	Proteobacteria	Alphaproteobacteria	6.57335	67.1123	chromosome:NZ_CP021181.1/CP021181.1; plasmid pDC01:NZ_CP021182.1/CP021182.1; plasmid pDC02:NZ_CP021183.1/CP021183.1; plasmid pDC03:NZ_CP021184.1/CP021184.1; plasmid pDC04:NZ_CP021185.1/CP021185.1; plasmid pDC05:NZ_CP021186.1/CP021186.1; plasmid pDC06:NZ_CP021187.1/CP021187.1; plasmid pDC07:NZ_CP021188.1/CP021188.1; plasmid pDC08:NZ_CP021189.1/CP021189.1; plasmid pDC09:NZ_CP021190.1/CP021190.1; plasmid pDC10:NZ_CP021191.1/CP021191.1; plasmid pDC11:NZ_CP021192.1/CP021192.1	-	12	6236	5998	5/10/17	5/24/17	Complete Genome	Nanjing Agricultural University	SAMN02768546	GCA_000715175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/175/GCA_000715175.2_ASM71517v2	24928877	DC-6
Caulobacter vibrioides	155892	PRJNA386178	386178	Proteobacteria	Alphaproteobacteria	4.16906	67.1	chromosome:NZ_CP023315.1/CP023315.1	-	1	3999	3788	9/18/17	9/20/17	Complete Genome	University of South Carolina	SAMN06927530	GCA_002310375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/375/GCA_002310375.1_ASM231037v1	-	CB13b1a
Bordetella hinzii	103855	PRJEB6403	251923	Proteobacteria	Betaproteobacteria	4.91381	67.1	chromosome 1:NZ_LT906461.1/LT906461.1	-	1	4637	4513	8/15/17	8/28/17	Complete Genome	SC	SAMEA4040645	GCA_900186895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/895/GCA_900186895.1_48450_A02	-	NCTC13200
Centipeda periodontii DSM 2778	888060	PRJNA53025	53025	Terrabacteria group	Firmicutes	2.76126	55.8	-	AFHQ01	10	2639	2453	5/18/11	4/17/17	Scaffold	Baylor College of Medicine	SAMN00259653	GCA_000213975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/975/GCA_000213975.1_ASM21397v1	-	DSM 2778
Betaproteobacteria bacterium GR16-43	1904640	PRJNA344368	344368	Proteobacteria	Betaproteobacteria	4.80685	67.1	chromosome:NZ_CP019169.1/CP019169.1	-	1	4492	4372	1/17/17	4/16/17	Complete Genome	Nakdonggang National Institute of Biological Resources	SAMN05821296	GCA_001953215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/215/GCA_001953215.1_ASM195321v1	-	GR16-43
Rhizobiales bacterium NRL2	1862950	PRJNA244670	244670	Proteobacteria	Alphaproteobacteria	4.70067	67.1	chromosome:CP016093.1	-	1	4406	4323	6/17/16	6/17/16	Complete Genome	US Naval Research laboratory	SAMN05248104	GCA_001664005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/005/GCA_001664005.1_ASM166400v1	-	-
Streptococcus pseudoporcinus LQ 940-04	875093	PRJNA51463	51463	Terrabacteria group	Firmicutes	2.12687	37.1	-	AEUY02	5	2067	1922	2/4/11	4/7/17	Contig	J. Craig Venter Institute	SAMN02436558	GCA_000188035.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/035/GCA_000188035.3_ASM18803v3	24625962	LQ 940-04
Pseudomonas citronellolis	53408	PRJNA309370	309370	Proteobacteria	Gammaproteobacteria	6.95144	67.1	chromosome:NZ_CP014158.1/CP014158.1	-	1	6189	6009	3/10/16	4/12/17	Complete Genome	Agroscope	SAMN04432139	GCA_001586155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/155/GCA_001586155.1_ASM158615v1	28300228	P3B5
Bordetella hinzii	103855	PRJNA287884	287884	Proteobacteria	Betaproteobacteria	4.91298	67.1	chromosome:NZ_CP012076.1/CP012076.1	-	1	4629	4502	7/16/15	4/3/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03790813	GCA_001078275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/275/GCA_001078275.1_ASM107827v1	26316634	F582
Eubacterium infirmum F0142	883109	PRJNA52085	52085	Terrabacteria group	Firmicutes	1.91093	40.1	-	AGWI01	13	1799	1686	1/12/12	4/17/17	Scaffold	Broad Institute	SAMN02463880	GCA_000242675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/675/GCA_000242675.1_Euba_infi_F0142_V1	-	F0142
Prevotella micans DSM 21469 = JCM 16134	1122987	PRJDB598	243174	FCB group	Bacteroidetes/Chlorobi group	2.42674	45.5	-	BAKH01	108	2003	1524	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00008960	GCA_000614105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/105/GCA_000614105.1_ASM61410v1	-	JCM 16134
Bordetella hinzii	103855	PRJNA287884	287884	Proteobacteria	Betaproteobacteria	4.85988	67.1	chromosome:NZ_CP012077.1/CP012077.1	-	1	4545	4422	7/16/15	4/3/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03790814	GCA_001078295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/295/GCA_001078295.1_ASM107829v1	26316634	H568
Facklamia languida CCUG 37842	883113	PRJNA52181	52181	Terrabacteria group	Firmicutes	1.71777	43.9	-	AGEG01	1	1596	1478	2/3/12	4/17/17	Scaffold	Broad Institute	SAMN02463907	GCA_000245795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/795/GCA_000245795.1_Fack_lang_CCUG_37842_V1	-	CCUG 37842
Helcococcus kunzii ATCC 51366	883114	PRJNA52183	52183	Terrabacteria group	Firmicutes	2.09646	29.5	-	AGEI01	2	1886	1805	2/3/12	4/17/17	Scaffold	Broad Institute	SAMN02596728	GCA_000245755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/755/GCA_000245755.1_Helc_kunz_ATCC_51366_V1	-	ATCC 51366
Corynebacterium variabile DSM 44702	858619	PRJNA50001	50001	Terrabacteria group	Actinobacteria	3.43301	67.1	chromosome:NC_015859.1/CP002917.1	-	1	3167	2951	7/19/11	4/7/17	Complete Genome	"Center of Biotechnology, Bielefeld University"	SAMN02603088	GCA_000179395.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/395/GCA_000179395.2_ASM17939v2	22053731	DSM 44702
Sphingobium yanoikuyae ATCC 51230	883163	PRJNA52201	52201	Proteobacteria	Alphaproteobacteria	5.53258	64.3	-	AGZU01	9	5166	4988	11/27/12	5/19/17	Scaffold	Broad Institute	SAMN02463913	GCA_000315525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/525/GCA_000315525.1_Sphi_yano_ATCC_51230_V1	-	ATCC 51230
Desulfovibrio vulgaris str. 'Miyazaki F'	883	PRJNA27731	27731	Proteobacteria	delta/epsilon subdivisions	4.0403	67.1	chromosome:NC_011769.1/CP001197.1	-	1	3269	3144	12/24/08	4/7/17	Complete Genome	US DOE Joint Genome Institute	SAMN00000799	GCA_000021385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/385/GCA_000021385.1_ASM2138v1	-	Miyazaki F
Afipia clevelandensis ATCC 49720	883079	PRJNA52157	52157	Proteobacteria	Alphaproteobacteria	4.39955	61.7	-	AGWY01	1	4248	4151	11/6/12	5/18/17	Scaffold	Broad Institute	SAMN02463899	GCA_000336555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/555/GCA_000336555.1_Afip_clev_ATCC49720_G12581_V1	-	ATCC 49720
Dolosigranulum pigrum ATCC 51524	883103	PRJNA52171	52171	Terrabacteria group	Firmicutes	1.86214	39.6	-	AGEF01	2	1715	1648	2/3/12	4/7/17	Scaffold	Broad Institute	SAMN02463904	GCA_000245815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/815/GCA_000245815.1_Dolo_pigr_ATCC_51524_V1	-	ATCC 51524
Acidiphilium cryptum JF-5	349163	PRJNA15753	15753	Proteobacteria	Alphaproteobacteria	3.96308	67.0985	chromosome:NC_009484.1/CP000697.1; plasmid pACRY01:NC_009467.1/CP000689.1; plasmid pACRY02:NC_009468.1/CP000690.1; plasmid pACRY03:NC_009469.1/CP000691.1; plasmid pACRY04:NC_009470.1/CP000692.1; plasmid pACRY05:NC_009471.1/CP000693.1; plasmid pACRY06:NC_009472.1/CP000694.1; plasmid pACRY07:NC_009473.1/CP000695.1; plasmid pACRY08:NC_009474.1/CP000696.1	-	9	3747	3574	5/11/07	4/6/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598339	GCA_000016725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/725/GCA_000016725.1_ASM1672v1	-	JF-5
Anaerophaga thermohalophila DSM 12881	886379	PRJNA52447	52447	FCB group	Bacteroidetes/Chlorobi group	4.32424	41.3	-	AEWI01	211	3415	3198	3/8/11	5/18/17	Contig	University of Bergen	SAMN02471583	GCA_000191885.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/885/GCA_000191885.2_ASM19188v1	-	DSM 12881
Ralstonia solanacearum	305	PRJNA286156	286156	Proteobacteria	Betaproteobacteria	5.73291	67.0949	chromosome:CP011997.1; plasmid unnamed:CP011998.1	-	2	4917	4621	8/14/15	10/13/15	Complete Genome	Plant Protection Research Institute	SAMN03765658	GCA_001267515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/515/GCA_001267515.1_ASM126751v1	-	YC45
Candidatus Nitrosoarchaeum limnia BG20	859192	PRJNA50027	50027	TACK group	Thaumarchaeota	1.85556	32.5	-	AHJG01	343	2234	1863	1/4/12	4/7/17	Contig	Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN00016663	GCA_000241145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/145/GCA_000241145.2_ASM24114v2	22461554	BG20
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.76453	67.0926	chromosome 1:NZ_CP013439.1/CP013439.1; chromosome 2:NZ_CP013440.1/CP013440.1; chromosome 3:NZ_CP013441.1/CP013441.1	-	3	6154	5825	9/2/16	4/5/17	Complete Genome	Northern Arizona University	SAMN03449410	GCA_001718815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/815/GCA_001718815.1_ASM171881v1	-	HI2297
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.9616	67.0813	chromosome 1:NZ_CP013370.1/CP013370.1; chromosome 2:NZ_CP013371.1/CP013371.1; chromosome 3:NZ_CP013368.1/CP013368.1; plasmid pRF23:NZ_CP013369.1/CP013369.1	-	4	7165	6829	9/2/16	3/28/17	Complete Genome	Northern Arizona University	SAMN03449140	GCA_001718355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/355/GCA_001718355.1_ASM171835v1	-	RF23-BP41
Paracoccus yeei	147645	PRJNA231221	231221	Proteobacteria	Alphaproteobacteria	4.82934	67.0776	chromosome:NZ_CP020442.1/CP020442.1; plasmid unnamed1:NZ_CP020441.1/CP020441.1; plasmid unnamed2:NZ_CP020440.1/CP020440.1; plasmid unnamed3:NZ_CP020443.1/CP020443.1; plasmid unnamed4:NZ_CP020444.1/CP020444.1; plasmid unnamed5:NZ_CP020445.1/CP020445.1; plasmid unnamed6:NZ_CP020446.1/CP020446.1; plasmid unnamed7:NZ_CP020447.1/CP020447.1	-	8	4694	4276	3/29/17	4/1/17	Complete Genome	US Food and Drug Administration 	SAMN04875578	GCA_002073635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/635/GCA_002073635.1_ASM207363v1	-	FDAARGOS_252
Pseudoxanthomonas suwonensis J47	935568	PRJNA208395	208395	Proteobacteria	Gammaproteobacteria	3.3467	70.6	-	AZUZ01	43	3031	2912	1/3/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02597204	GCA_000513955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/955/GCA_000513955.1_ASM51395v1	-	J47
Halomonas elongata	2746	PRJNA322438	322438	Proteobacteria	Gammaproteobacteria	4.06348	63.5	-	MAJD01	2	3848	2581	7/3/16	4/13/17	Contig	"Indian Agricultural Research Institute, New Delhi"	SAMN05162584	GCA_001678785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/785/GCA_001678785.1_ASM167878v1	-	HEK1
Streptococcus porcinus str. Jelinkova 176	873448	PRJNA51459	51459	Terrabacteria group	Firmicutes	2.02588	36.8	-	AEUU02	1	1999	1891	2/4/11	4/7/17	Contig	JCVI	SAMN02436556	GCA_000187955.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/955/GCA_000187955.3_ASM18795v2	24625962	Jelinkova 176
Streptococcus criceti HS-6	873449	PRJNA51461	51461	Terrabacteria group	Firmicutes	2.41856	42.2	-	AEUV02	2	2280	2083	2/4/11	4/7/17	Contig	JCVI	SAMN02436557	GCA_000187975.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/975/GCA_000187975.3_ASM18797v3	24625962	HS-6
[Pseudomonas] mesoacidophila	265293	PRJNA381873	381873	Proteobacteria	Betaproteobacteria	7.84083	67.0758	chromosome 1:NZ_CP020737.1/CP020737.1; chromosome 2:NZ_CP020738.1/CP020738.1; chromosome 3:NZ_CP020739.1/CP020739.1; plasmid pATCC31433:NZ_CP020740.1/CP020740.1	-	4	7175	6850	4/18/17	6/27/17	Complete Genome	Cardiff University	SAMN06690200	GCA_002097715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/715/GCA_002097715.1_ASM209771v1	-	ATCC 31433
Methylomicrobium album BG8	686340	PRJNA51783	51783	Proteobacteria	Gammaproteobacteria	4.49344	56.2612	chromosome:NZ_CM001475.1/CM001475.1; plasmid pMETAL01:NZ_CM001476.1/CM001476.1	AFJF02	2	3931	3792	5/20/11	8/14/15	Chromosome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02256390	GCA_000214275.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/275/GCA_000214275.3_ASM21427v3	23580712	BG8
gamma proteobacterium IMCC3088	876044	PRJNA52389	52389	Proteobacteria	Gammaproteobacteria	3.03962	51.6	-	AEIG01	183	2866	2737	4/14/11	4/17/17	Contig	Inha University	SAMN02469925	GCA_000204315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/315/GCA_000204315.2_ASM20431v1	21551310	IMCC3088
Gordonia bronchialis DSM 43247	526226	PRJNA29549	29549	Terrabacteria group	Actinobacteria	5.29001	67.0692	chromosome:NC_013441.1/CP001802.1; plasmid pGBRO01:NC_013442.1/CP001803.1	-	2	4934	4601	10/27/09	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002600	GCA_000024785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/785/GCA_000024785.1_ASM2478v1	21304674	DSM 43247
Kingella kingae Vir5453	1305785	PRJEB1637	194480	Proteobacteria	Betaproteobacteria	1.99263	46.7	-	CBSQ01	1	1975	1674	9/11/13	4/2/17	Scaffold	URMITE	SAMEA2272475	GCA_000470375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/375/GCA_000470375.1_Vir5453	-	Vir5453
Burkholderia oklahomensis C6786	441162	PRJNA238548	238548	Proteobacteria	Betaproteobacteria	7.13502	67.0684	chromosome I:NZ_CP009555.1/CP009555.1; chromosome II:NZ_CP009556.1/CP009556.1	-	2	6677	6173	3/20/15	4/10/17	Complete Genome	Los Alamos National Laboratory	SAMN03075637	GCA_000959365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/365/GCA_000959365.1_ASM95936v1	25931592	C6786
Burkholderia cepacia	292	PRJNA244017	244017	Proteobacteria	Betaproteobacteria	8.14711	67.0601	chromosome 3:NZ_CP007785.1/CP007785.1; chromosome 1:NZ_CP007787.1/CP007787.1; chromosome 2:NZ_CP007786.1/CP007786.1	-	3	7688	7405	9/18/14	4/2/17	Complete Genome	Los Alamos National Laboratory	SAMN02797514	GCA_000755805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/805/GCA_000755805.1_ASM75580v1	25414490	DDS 7H-2
Sphingomonas melonis TY	621456	PRJNA345324	345324	Proteobacteria	Alphaproteobacteria	4.19675	67.0559	chromosome:NZ_CP017578.1/CP017578.1; plasmid unnamed:NZ_CP017579.1/CP017579.1	-	2	3917	3566	10/12/16	4/13/17	Complete Genome	"Institute of Microbiology, College of Life Sciences, Zhejiang University，866 Yuhangtang Road, Hangzhou, 310058, China"	SAMN05860869	GCA_001761345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/345/GCA_001761345.1_ASM176134v1	-	TY
Ralstonia solanacearum	305	PRJNA314721	314721	Proteobacteria	Betaproteobacteria	5.60824	67.0383	chromosome:NZ_CP016904.1/CP016904.1; plasmid unnamed1:NZ_CP016905.1/CP016905.1	-	2	5011	4725	8/23/16	9/27/17	Complete Genome	Seoul National University	SAMN04539710	GCA_001708525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/525/GCA_001708525.1_ASM170852v1	-	KACC10709
Burkholderia cenocepacia	95486	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.33075	67.036	chromosome 1:CP013397.1; chromosome 2:CP013396.1	-	2	5628	5514	9/2/16	9/2/16	Complete Genome	Northern Arizona University	SAMN03449242	GCA_001718515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/515/GCA_001718515.1_ASM171851v1	-	FL-5-3-30-S1-D7
Burkholderia dolosa AU0158	350701	PRJNA235220	235220	Proteobacteria	Betaproteobacteria	6.40909	67.0353	chromosome 1:NZ_CP009795.1/CP009795.1; chromosome 2:NZ_CP009793.1/CP009793.1; chromosome 3:NZ_CP009794.1/CP009794.1	-	3	5912	5616	3/20/15	4/10/17	Complete Genome	Los Alamos National Laboratory	SAMN03144971	GCA_000959505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/505/GCA_000959505.1_ASM95950v1	25931592	AU0158
Hylemonella gracilis ATCC 19624	887062	PRJNA52551	52551	Proteobacteria	Betaproteobacteria	3.61871	65.1	-	AEGR01	115	3309	3189	5/3/11	4/7/17	Contig	California Institute of Technology	SAMN02469410	GCA_000211835.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/211/835/GCA_000211835.2_ASM21183v1	21673657	ATCC 19624
Actinomyces neuii subsp. neuii DSM 8576	1120945	PRJNA185520	185520	Terrabacteria group	Actinobacteria	2.27029	56.2	-	ATUW01	29	2036	1949	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441245	GCA_000420405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/405/GCA_000420405.1_ASM42040v1	-	DSM 8576
Actinobacillus ureae ATCC 25976	887324	PRJNA52977	52977	Proteobacteria	Gammaproteobacteria	2.35447	40.1	-	AEVG01	27	2293	1928	2/4/11	4/7/17	Scaffold	Baylor College of Medicine	SAMN00253301	GCA_000188255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/255/GCA_000188255.1_ASM18825v1	-	ATCC 25976
Lachnoanaerobaculum saburreum DSM 3986	887325	PRJNA52981	52981	Terrabacteria group	Firmicutes	3.0824	36.9	-	AEPW01	37	2841	2638	12/27/10	4/7/17	Scaffold	Baylor College of Medicine	SAMN00216780	GCA_000185385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/385/GCA_000185385.1_ASM18538v1	-	DSM 3986
Lautropia mirabilis ATCC 51599	887898	PRJNA52989	52989	Proteobacteria	Betaproteobacteria	3.15192	65.5	-	AEQP01	8	2587	2498	1/20/11	4/17/17	Scaffold	Baylor College of Medicine	SAMN00262616	GCA_000186425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/425/GCA_000186425.1_ASM18642v1	-	ATCC 51599
Pseudoramibacter alactolyticus ATCC 23263	887929	PRJNA52995	52995	Terrabacteria group	Firmicutes	2.36288	51.6	-	AEQN01	42	2262	2131	12/29/10	4/17/17	Scaffold	Baylor College of Medicine	SAMN00260151	GCA_000185505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/505/GCA_000185505.1_ASM18550v1	-	ATCC 23263
Actinomyces cardiffensis F0333	888050	PRJNA53007	53007	Terrabacteria group	Actinobacteria	2.21485	61.3	-	AQHZ01	15	1817	1734	4/15/13	4/17/17	Scaffold	Baylor College of Medicine	SAMN00260255	GCA_000364865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/865/GCA_000364865.1_ASM36486v1	-	F0333
Aggregatibacter segnis ATCC 33393	888057	PRJNA53019	53019	Proteobacteria	Gammaproteobacteria	2.01201	42.5	-	AEPS01	5	1933	1846	12/27/10	4/7/17	Scaffold	Baylor College of Medicine	SAMN00210783	GCA_000185305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/305/GCA_000185305.1_ASM18530v1	-	ATCC 33393
Enterococcus italicus DSM 15952	888064	PRJNA53039	53039	Terrabacteria group	Firmicutes	2.41579	39.6	-	AEPV01	55	2274	2110	12/27/10	4/7/17	Scaffold	Baylor College of Medicine	SAMN00215989	GCA_000185365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/365/GCA_000185365.1_ASM18536v1	-	DSM 15952
Haemophilus aegyptius ATCC 11116	888728	PRJNA53049	53049	Proteobacteria	Gammaproteobacteria	1.96358	38.3	-	AFBC01	22	1973	1797	4/4/11	4/7/17	Scaffold	Baylor College of Medicine	SAMN00260259	GCA_000195005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/005/GCA_000195005.1_ASM19500v1	-	ATCC 11116
Kingella denitrificans ATCC 33394	888741	PRJNA53051	53051	Proteobacteria	Betaproteobacteria	2.22045	54	-	AEWV01	12	2247	2139	3/1/11	4/7/17	Scaffold	Baylor College of Medicine	SAMN00253309	GCA_000190695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/695/GCA_000190695.1_ASM19069v1	-	ATCC 33394
Neisseria bacilliformis ATCC BAA-1200	888742	PRJNA53053	53053	Proteobacteria	Betaproteobacteria	2.47058	59.4	-	AFAY01	13	2354	2235	4/4/11	4/7/17	Scaffold	Baylor College of Medicine	SAMN00253995	GCA_000194925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/925/GCA_000194925.1_ASM19492v1	-	ATCC BAA-1200
Rhodococcus opacus	37919	PRJNA253567	253567	Terrabacteria group	Actinobacteria	8.63753	67.0341	chromosome:NZ_CP009111.1/CP009111.1; plasmid pR1CP1:NZ_CP009112.1/CP009112.1; plasmid pR1CP2:NZ_CP009113.1/CP009113.1	-	3	7973	7380	7/15/16	4/5/17	Complete Genome	Bielefeld University	SAMN02872839	GCA_001685605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/605/GCA_001685605.1_ASM168560v1	-	1CP
Prevotella multiformis DSM 16608	888743	PRJNA53055	53055	FCB group	Bacteroidetes/Chlorobi group	3.05741	51.6	-	AEWX01	25	2571	2395	3/1/11	4/17/17	Scaffold	Baylor College of Medicine	SAMN00253307	GCA_000191065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/065/GCA_000191065.1_ASM19106v1	-	DSM 16608
Streptococcus peroris ATCC 700780	888746	PRJNA53059	53059	Terrabacteria group	Firmicutes	1.63992	39.2	-	AEVF01	3	1644	1588	2/1/11	4/17/17	Scaffold	Baylor College of Medicine	SAMN00253298	GCA_000187585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/585/GCA_000187585.1_ASM18758v1	-	ATCC 700780
Prevotella salivae DSM 15606	888832	PRJNA53199	53199	FCB group	Bacteroidetes/Chlorobi group	3.27458	41.6	-	AEQO01	40	2686	2460	12/30/10	4/7/17	Scaffold	Baylor College of Medicine	SAMN00216886	GCA_000185845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/845/GCA_000185845.1_ASM18584v1	-	DSM 15606
Streptococcus australis ATCC 700641	888833	PRJNA53201	53201	Terrabacteria group	Firmicutes	2.12995	41.9	-	AEQR01	6	2052	1958	1/20/11	4/7/17	Scaffold	Baylor College of Medicine	SAMN00253300	GCA_000186465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/465/GCA_000186465.1_ASM18646v1	-	ATCC 700641
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.39491	67.0285	chromosome 1:NZ_CP019670.1/CP019670.1; chromosome 2:NZ_CP019669.1/CP019669.1	-	2	6870	6582	2/15/17	3/29/17	Complete Genome	University of British Columbia	SAMN05001933	GCA_001999825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/825/GCA_001999825.1_ASM199982v1	-	VC12802
Rhodovulum sp. MB263	308754	PRJNA379495	379495	Proteobacteria	Alphaproteobacteria	4.16256	67.0269	chromosome:NZ_CP020384.1/CP020384.1; plasmid pRSMBA:NZ_CP020385.1/CP020385.1; plasmid pRSMBB:NZ_CP020386.1/CP020386.1	-	3	3882	3725	3/29/17	4/1/17	Complete Genome	Toyohashi University of Technology	SAMN06610252	GCA_002073975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/975/GCA_002073975.1_ASM207397v1	-	MB263
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.89171	67.0167	chromosome 1:NZ_CP013453.1/CP013453.1; chromosome 2:NZ_CP013455.1/CP013455.1; chromosome 3:NZ_CP013456.1/CP013456.1; plasmid pMSMB608:NZ_CP013454.1/CP013454.1	-	4	6298	5967	9/2/16	4/5/17	Complete Genome	Northern Arizona University	SAMN03449611	GCA_001718915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/915/GCA_001718915.1_ASM171891v1	-	MSMB608WGS
Burkholderia cenocepacia	95486	PRJNA274219	274219	Proteobacteria	Betaproteobacteria	8.09039	67.0132	chromosome 1:NZ_CP011917.1/CP011917.1; chromosome 2:NZ_CP011918.1/CP011918.1; chromosome 3:NZ_CP011919.1/CP011919.1; plasmid pBCEN1232:NZ_CP011920.1/CP011920.1	-	4	7619	7149	1/4/16	3/27/17	Complete Genome	Institute of Molecular Genetics of the ASCR	SAMN03323790	GCA_001484665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/665/GCA_001484665.1_ASM148466v1	-	ST32
Burkholderia sp. MSMB0266	1637837	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.42755	67.0101	chromosome 1:NZ_CP013417.1/CP013417.1; chromosome 2:NZ_CP013418.1/CP013418.1; plasmid pMSMB0266:NZ_CP013419.1/CP013419.1	-	3	7087	6483	9/2/16	5/3/17	Complete Genome	Northern Arizona University	SAMN03449267	GCA_001524445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/445/GCA_001524445.2_ASM152444v2	-	MSMB0266
Streptococcus vestibularis ATCC 49124	889206	PRJNA53209	53209	Terrabacteria group	Firmicutes	1.87277	39.7	-	AEVI01	21	1848	1655	2/4/11	4/7/17	Scaffold	Baylor College of Medicine	SAMN00253297	GCA_000188295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/295/GCA_000188295.1_ASM18829v1	-	ATCC 49124
Burkholderia cepacia	292	PRJNA281467	281467	Proteobacteria	Betaproteobacteria	6.41938	67	chromosome:NZ_CP011301.1/CP011301.1	-	1	5928	5618	4/21/15	4/5/17	Complete Genome	University of Hawaii at Manoa	SAMN03486590	GCA_000974835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/835/GCA_000974835.2_ASM97483v2	26067955	LO6
Corynebacterium terpenotabidum Y-11	1200352	PRJNA168617	168617	Terrabacteria group	Actinobacteria	2.75123	67	chromosome:NC_021663.1/CP003696.1	-	1	2451	2347	7/5/13	4/17/17	Complete Genome	Bielefeld University	SAMN02603028	GCA_000418365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/365/GCA_000418365.1_ASM41836v1	-	Y-11
Acidiphilium multivorum AIU301	926570	PRJDA60101	60101	Proteobacteria	Alphaproteobacteria	4.21474	66.9853	chromosome:NC_015186.1/AP012035.1; plasmid pACMV1:NC_015178.1/AP012036.1; plasmid pACMV2:NC_015187.1/AP012037.1; plasmid pACMV3:NC_015179.1/AP012038.1; plasmid pACMV4:NC_015188.1/AP012039.1; plasmid pACMV5:NC_015180.1/AP012040.1; plasmid pACMV6:NC_015181.1/AP012041.1; plasmid pACMV7:NC_015189.1/AP012042.1; plasmid pACMV8:NC_015182.1/AP012043.1	-	9	3991	3803	3/2/11	5/18/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00060977	GCA_000202835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/202/835/GCA_000202835.1_ASM20283v1	-	AIU301
Leuconostoc fallax KCTC 3537	907931	PRJNA53965	53965	Terrabacteria group	Firmicutes	1.63897	37.5	-	AEIZ01	30	1692	1356	10/26/10	4/7/17	Contig	Korea Research Institute of Bioscience and Biotechnology (KRIBB)	SAMN02470184	GCA_000165675.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/165/675/GCA_000165675.2_ASM16567v1	21075921	KCTC 3537
Eremococcus coleocola DSM 15696	1121871	PRJNA185355	185355	Terrabacteria group	Firmicutes	1.86964	38.8	-	AUAT01	48	1882	1747	7/15/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440875	GCA_000428865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/865/GCA_000428865.1_ASM42886v1	-	DSM 15696
Peptoniphilus harei ACS-146-V-Sch2b	908338	PRJNA54023	54023	Terrabacteria group	Firmicutes	1.83603	34.4	-	AENP01	32	1744	1667	11/29/10	4/7/17	Contig	J. Craig Venter Institute	SAMN00116775	GCA_000183565.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/565/GCA_000183565.2_ASM18356v1	-	ACS-146-V-Sch2b
Lactobacillus oris PB013-T2-3	908339	PRJNA54025	54025	Terrabacteria group	Firmicutes	2.11599	49.8	-	AEKL01	89	2039	1940	11/4/10	4/7/17	Contig	J. Craig Venter Institute	SAMN00116776	GCA_000180015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/180/015/GCA_000180015.1_ASM18001v1	-	PB013-T2-3
Burkholderia cenocepacia	95486	PRJNA315790	315790	Proteobacteria	Betaproteobacteria	8.1497	66.9768	chromosome 1:NZ_CP015033.1/CP015033.1; chromosome 2:NZ_CP015034.1/CP015034.1; chromosome 3:NZ_CP015035.1/CP015035.1; plasmid pBcn842-1:NZ_CP015032.1/CP015032.1	-	4	7600	7303	4/4/16	3/28/17	Complete Genome	University of Malaya	SAMN04570263	GCA_001606115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/115/GCA_001606115.1_ASM160611v1	-	842
Prevotella dentalis DSM 3688	908937	PRJNA64735	64735	FCB group	Bacteroidetes/Chlorobi group	3.28647	56	-	AFPW01	25	2585	2457	7/7/11	7/7/17	Scaffold	Baylor College of Medicine	SAMN00262626	GCA_000220215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/215/GCA_000220215.1_ASM22021v1	-	DSM 3688
Rhodococcus jostii RHA1	101510	PRJNA13693	13693	Terrabacteria group	Actinobacteria	9.70274	66.9735	chromosome:NC_008268.1/CP000431.1; plasmid pRHL1:NC_008269.1/CP000432.1; plasmid pRHL2:NC_008270.1/CP000433.1; plasmid pRHL3:NC_008271.1/CP000434.1	-	4	9256	8690	7/28/06	5/19/17	Complete Genome	University of British Columbia	SAMN02604146	GCA_000014565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/565/GCA_000014565.1_ASM1456v1	-	RHA1
Burkholderia cenocepacia	95486	PRJNA244014	244014	Proteobacteria	Betaproteobacteria	8.04525	66.9679	chromosome 1:NZ_CP007783.1/CP007783.1; chromosome 2:NZ_CP007784.1/CP007784.1; chromosome 3:NZ_CP007782.1/CP007782.1	-	3	7347	7030	9/18/14	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN02796386	GCA_000755725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/725/GCA_000755725.1_ASM75572v1	25414490	DDS 22E-1
Ralstonia solanacearum GMI1000	267608	PRJNA13	13	Proteobacteria	Betaproteobacteria	5.81092	66.964	chromosome:NC_003295.1/AL646052.1; plasmid pGMI1000MP:NC_003296.1/AL646053.1	-	2	5208	4984	12/7/01	5/19/17	Complete Genome	Genoscope	SAMEA3138192	GCA_000009125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/125/GCA_000009125.1_ASM912v1	11823852	GMI1000
Gordonia polyisoprenivorans VH2	1112204	PRJNA76601	76601	Terrabacteria group	Actinobacteria	5.8443	66.9612	chromosome:NC_016906.1/CP003119.1; plasmid p174:NC_016907.1/CP003120.1	-	2	5245	5075	2/16/12	5/18/17	Complete Genome	Goettingen Genomics Laboratory	SAMN02603285	GCA_000247715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/715/GCA_000247715.1_ASM24771v1	22327575	VH2
Dietzia cinnamea P4	910954	PRJNA59501	59501	Terrabacteria group	Actinobacteria	3.5553	71	-	AEKG01	428	3432	3025	1/18/11	4/7/17	Contig	Universidade Federal do Rio de Janeiro	SAMN02471383	GCA_000186325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/325/GCA_000186325.2_ASM18632v1	21901521	P4
Desulfobacter postgatei 2ac9	879212	PRJNA59797	59797	Proteobacteria	delta/epsilon subdivisions	3.97466	47.2	chromosome:NZ_CM001488.1/CM001488.1	AGJR02	1	3733	3485	11/2/11	4/17/17	Chromosome	JGI	SAMN02261381	GCA_000233695.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/695/GCA_000233695.3_ASM23369v3	-	2ac9
Rhodobacter sp. LPB0142	1850250	PRJNA341558	341558	Proteobacteria	Alphaproteobacteria	3.78083	66.9488	chromosome:NZ_CP017781.1/CP017781.1; plasmid pEJ01:NZ_CP017782.1/CP017782.1; plasmid pEJ02:NZ_CP017783.1/CP017783.1; plasmid pEJ03:NZ_CP017784.1/CP017784.1	-	4	3702	3529	10/31/16	4/13/17	Complete Genome	Korea University	SAMN05726021	GCA_001856665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/665/GCA_001856665.1_ASM185666v1	-	LPB0142
Burkholderia oklahomensis	342113	PRJNA244064	244064	Proteobacteria	Betaproteobacteria	7.31367	66.9427	chromosome 1:NZ_CP008726.1/CP008726.1; chromosome 2:NZ_CP008727.1/CP008727.1	-	2	6902	6355	9/18/14	4/9/17	Complete Genome	Los Alamos National Laboratory	SAMN02847801	GCA_000755985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/985/GCA_000755985.1_ASM75598v1	25414490	EO147
Thermus brockianus	56956	PRJNA314486	314486	Terrabacteria group	Deinococcus-Thermus	2.38827	66.9263	chromosome:NZ_CP016312.1/CP016312.1; plasmid pTB1:NZ_CP016313.1/CP016313.1; plasmid pTB2:NZ_CP016314.1/CP016314.1	-	3	2520	2305	11/17/16	4/17/17	Complete Genome	Hamburg University of Technology	SAMN04535499	GCA_001880325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/325/GCA_001880325.1_ASM188032v1	28174620	GE-1
Lactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001	913848	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.70508	42.9	-	AZCN01	198	2633	2499	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369482	GCA_001433765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/765/GCA_001433765.1_ASM143376v1	26415554	DSM 20001
Rhodovulum sulfidophilum DSM 1374	1188256	PRJNA319729	319729	Proteobacteria	Alphaproteobacteria	4.34793	66.9181	chromosome:NZ_CP015418.1/CP015418.1; plasmid unnamed1:NZ_CP015419.1/CP015419.1; plasmid unnamed2:NZ_CP015420.1/CP015420.1	-	3	4064	3899	4/28/16	4/5/17	Complete Genome	Toyohashi University of Technology	SAMN04903811	GCA_001633165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/165/GCA_001633165.1_ASM163316v1	-	DSM 1374
Leuconostoc inhae KCTC 3774	927694	PRJNA60231	60231	Terrabacteria group	Firmicutes	2.29809	36.4	-	AEMJ01	893	-	-	11/17/10	8/22/17	Contig	Korea Research Institute of Bioscience and Biotechnology (KRIBB)	SAMN02472184	GCA_000166735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/735/GCA_000166735.2_ASM16673v1	21183671	KCTC 3774
Corynebacterium bovis DSM 20582 = CIP 54.80	927655	PRJNA60239	60239	Terrabacteria group	Actinobacteria	2.52296	72.6	-	AENJ01	503	2179	1893	11/26/10	4/17/17	Contig	"Center of Biotechnology, Bielefeld University"	SAMN02469392	GCA_000183325.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/325/GCA_000183325.2_ASM18332v1	22843578	DSM 20582
Burkholderia cenocepacia J2315	216591	PRJNA339	339	Proteobacteria	Betaproteobacteria	8.05578	66.9165	chromosome 1:NC_011000.1/AM747720.1; chromosome 2:NC_011001.1/AM747721.1; chromosome 3:NC_011002.1/AM747722.1; plasmid pBCJ2315:NC_011003.1/AM747723.1	-	4	7645	7355	6/19/08	5/18/17	Complete Genome	Sanger Institute	SAMEA1705928	GCA_000009485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/485/GCA_000009485.1_ASM948v1	18931103	J2315
Lactobacillus animalis KCTC 3501 = DSM 20602	930942	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.88019	41.1	-	AYYW01	58	1848	1722	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369389	GCA_001434535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/535/GCA_001434535.1_ASM143453v1	26415554	DSM 20602
Erysipelotrichaceae bacterium 21_3	658657	PRJNA39369	39369	Terrabacteria group	Firmicutes	4.41458	43.7	-	ACTI01	6	4381	4186	1/10/12	5/18/17	Scaffold	Broad Institute	SAMN02463767	GCA_000242195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/195/GCA_000242195.1_Erys_bact_21_3_V1	-	21_3
Aeromonas caviae	648	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.44564	61.7	-	LESK01	5	4107	3940	6/19/15	7/24/17	Scaffold	Broad Institute	SAMN03280160	GCA_001030105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/105/GCA_001030105.1_Aero_hydr_BWH65_V1	-	BWH65
Burkholderia cenocepacia AU 1054	331271	PRJNA13919	13919	Proteobacteria	Betaproteobacteria	7.27912	66.9164	chromosome 1:NC_008060.1/CP000378.1; chromosome 2:NC_008061.1/CP000379.1; chromosome 3:NC_008062.1/CP000380.1	-	3	6804	6469	6/1/06	5/18/17	Complete Genome	DOE Joint Genome Institute	SAMN02598326	GCA_000014085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/085/GCA_000014085.1_ASM1408v1	-	AU 1054
Burkholderia multivorans	87883	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.84536	66.9041	chromosome 1:NZ_CP013467.1/CP013467.1; chromosome 2:NZ_CP013466.1/CP013466.1; chromosome 3:NZ_CP013468.1/CP013468.1	-	3	6438	6113	9/2/16	4/5/17	Complete Genome	Northern Arizona University	SAMN03449689	GCA_001718995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/995/GCA_001718995.1_ASM171899v1	-	MSMB1640WGS
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.49946	66.9	chromosome:NZ_CP019668.1/CP019668.1	-	1	7024	6707	2/15/17	3/29/17	Complete Genome	University of British Columbia	SAMN05001925	GCA_001999785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/785/GCA_001999785.1_ASM199978v1	-	VC7848
Delftia sp. HK171	1920191	PRJNA353889	353889	Proteobacteria	Betaproteobacteria	6.43038	66.9	chromosome:NZ_CP018101.1/CP018101.1	-	1	5721	5505	11/28/16	4/16/17	Complete Genome	Korea Research Institute of Chemical Technology	SAMN06027798	GCA_001886655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/655/GCA_001886655.1_ASM188665v1	-	HK171
Mycobacterium sp. NRRL B-3805	1570328	PRJNA266535	266535	Terrabacteria group	Actinobacteria	5.42134	66.9	chromosome:NZ_CP011022.1/CP011022.1	-	1	5104	4989	3/7/16	4/12/17	Complete Genome	MySterI	SAMN03396774	GCA_001580405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/405/GCA_001580405.1_ASM158040v1	26988397	NRRL B-3805
Mycobacterium neoaurum VKM Ac-1815D	700508	PRJNA177066	177066	Terrabacteria group	Actinobacteria	5.42127	66.9	chromosome:NC_023036.2/CP006936.2	-	1	5103	4988	12/13/13	4/9/17	Complete Genome	"Laboratory of microbiological transformation of organic compounds, G.K.Skryabin Institute of Biochemistry and Physiology of Microorganisms, Russian Academy of Sciences"	SAMN02641502	GCA_000317305.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/305/GCA_000317305.3_ASM31730v3	24435872	VKM Ac-1815D
Fructobacillus fructosus KCTC 3544	930946	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.48486	44.6	-	JQBH01	45	1524	1427	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02797802	GCA_001438695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/695/GCA_001438695.1_ASM143869v1	26415554	DSM 20349
Wolbachia endosymbiont of Culex pipiens molestus	263438	PRJEA52451	52451	Proteobacteria	Alphaproteobacteria	1.47953	34.3	-	CACK01	888	1251	1076	11/23/10	4/17/17	Contig	Wellcome Trust Sanger Institute	SAMEA2272196	GCA_000208785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/208/785/GCA_000208785.1_ASM20878v1	-	-
Stenotrophomonas maltophilia JV3	868597	PRJNA53943	53943	Proteobacteria	Gammaproteobacteria	4.54448	66.9	chromosome:NC_015947.1/CP002986.1	-	1	4164	4044	8/17/11	6/15/17	Complete Genome	JGI	SAMN02261377	GCA_000223885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/223/885/GCA_000223885.1_ASM22388v1	-	JV3
Acidothermus cellulolyticus 11B	351607	PRJNA16097	16097	Terrabacteria group	Actinobacteria	2.44354	66.9	chromosome:NC_008578.1/CP000481.1	-	1	2223	2152	11/9/06	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02598358	GCA_000015025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/025/GCA_000015025.1_ASM1502v1	19270083	11B; ATCC 43068
Rhodovulum sulfidophilum	35806	PRJDB3519	278942	Proteobacteria	Alphaproteobacteria	4.73277	66.8886	chromosome Unknown:NZ_AP014800.1/AP014800.1; plasmid Plasmid1:NZ_AP014801.1/AP014801.1; plasmid Plasmid2:NZ_AP014802.1/AP014802.1; plasmid Plasmid3:NZ_AP014803.1/AP014803.1	-	4	4376	4146	3/18/15	4/10/17	Complete Genome	Toyohashi University of Technology	SAMD00025828	GCA_001548075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/075/GCA_001548075.1_ASM154807v1	25931606	DSM 2351
Burkholderia multivorans	87883	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.62094	66.8762	chromosome 1:NZ_CP013430.1/CP013430.1; chromosome 2:NZ_CP013431.1/CP013431.1; chromosome 3:NZ_CP013432.1/CP013432.1	-	3	6286	5989	9/2/16	4/5/17	Complete Genome	Northern Arizona University	SAMN03449401	GCA_001718755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/755/GCA_001718755.1_ASM171875v1	-	AU1185
Ralstonia solanacearum	305	PRJNA379485	379485	Proteobacteria	Betaproteobacteria	5.99693	66.8689	chromosome:NZ_CP021448.1/CP021448.1; plasmid pSEPPX05:NZ_CP021449.1/CP021449.1	-	2	5503	5163	5/31/17	6/2/17	Complete Genome	Jiangxi Academy of Agricultural Sciences	SAMN06610220	GCA_002162015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/015/GCA_002162015.1_ASM216201v1	-	SEPPX05
Ralstonia solanacearum FJAT-91	1130829	PRJNA329188	329188	Proteobacteria	Betaproteobacteria	5.87409	66.8681	chromosome:NZ_CP016612.1/CP016612.1; plasmid unnamed1:NZ_CP016613.1/CP016613.1	-	2	5227	4955	5/22/17	5/24/17	Complete Genome	Fujian Academy of Agricultural Science	SAMN02469793	GCA_002155245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/245/GCA_002155245.1_ASM215524v1	-	FJAT-91
Ralstonia solanacearum OE1-1	1429399	PRJDB4012	287905	Proteobacteria	Betaproteobacteria	5.76297	66.868	chromosome:NZ_CP009764.1/CP009764.1; plasmid unnamed:NZ_CP009763.1/CP009763.1	-	2	5095	4870	11/16/16	4/5/17	Complete Genome	Kochi University	SAMD00034391	GCA_001879565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/565/GCA_001879565.1_ASM187956v1	-	OE1-1
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.83507	66.8632	chromosome 1:NZ_CP013433.1/CP013433.1; chromosome 2:NZ_CP013434.1/CP013434.1	-	2	6276	5927	9/2/16	4/5/17	Complete Genome	Northern Arizona University	SAMN03449402	GCA_001718775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/775/GCA_001718775.1_ASM171877v1	-	AU1233
Rhodovulum sulfidophilum	35806	PRJNA319729	319729	Proteobacteria	Alphaproteobacteria	4.19649	66.8568	chromosome:NZ_CP015421.1/CP015421.1; plasmid unnamed:NZ_CP015422.1/CP015422.1	-	2	3933	3767	4/28/16	4/5/17	Complete Genome	Toyohashi University of Technology	SAMN04903812	GCA_001633145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/145/GCA_001633145.1_ASM163314v1	-	SNK001
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.23506	66.8518	chromosome 1:NZ_CP013414.1/CP013414.1; chromosome 2:NZ_CP013416.1/CP013416.1; plasmid pMSMB2035:NZ_CP013415.1/CP013415.1	-	3	6772	6428	9/2/16	3/28/17	Complete Genome	Northern Arizona University	SAMN03449265	GCA_001718655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/655/GCA_001718655.1_ASM171865v1	-	MSMB2035
Conexibacter woesei Iso977N	1283299	PRJNA186462	186462	Terrabacteria group	Actinobacteria	5.69542	72.4	-	AUKG01	9	5453	5350	7/10/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440675	GCA_000424625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/625/GCA_000424625.1_ASM42462v1	-	Iso977N
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.33738	66.8476	chromosome 1:NZ_CP013375.1/CP013375.1; chromosome 2:NZ_CP013376.1/CP013376.1	-	2	6735	6434	9/2/16	4/5/17	Complete Genome	Northern Arizona University	SAMN03449179	GCA_001718395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/395/GCA_001718395.1_ASM171839v1	-	INT3-BP177
Ralstonia solanacearum	305	PRJNA331070	331070	Proteobacteria	Betaproteobacteria	5.89344	66.8399	chromosome:NZ_CP016914.1/CP016914.1; plasmid unnamed:NZ_CP016915.1/CP016915.1	-	2	5243	4808	7/18/17	7/20/17	Complete Genome	Southwest University	SAMN05437153	GCA_002220465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/465/GCA_002220465.1_ASM222046v1	28620361	CQPS-1
Burkholderia vietnamiensis LMG 10929	1449978	PRJNA235223	235223	Proteobacteria	Betaproteobacteria	6.9305	66.8371	chromosome I:NZ_CP009631.1/CP009631.1; chromosome II:NZ_CP009630.1/CP009630.1; chromosome III:NZ_CP009632.1/CP009632.1; plasmid pBVB_1:NZ_CP009629.1/CP009629.1	-	4	6304	5949	3/20/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03107475	GCA_000959445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/445/GCA_000959445.1_ASM95944v1	25931592	LMG 10929
Burkholderia cenocepacia	95486	PRJNA342374	342374	Proteobacteria	Betaproteobacteria	7.66489	66.8231	chromosome 1:NZ_CP017238.1/CP017238.1; chromosome 2:NZ_CP017239.1/CP017239.1; chromosome 3:NZ_CP017240.1/CP017240.1	-	3	7157	6850	2/28/17	4/24/17	Complete Genome	Agriculture and Agri-Food Canada	SAMN05756084	GCA_002007585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/585/GCA_002007585.1_ASM200758v1	-	CR318
Burkholderia cepacia JBK9	1395570	PRJNA217842	217842	Proteobacteria	Betaproteobacteria	8.48121	66.8102	chromosome 3:NZ_CP013732.1/CP013732.1; chromosome 1:NZ_CP013730.1/CP013730.1; chromosome 2:NZ_CP013731.1/CP013731.1	-	3	7822	7476	1/8/16	4/4/17	Complete Genome	Kyungpook national university	SAMN02680268	GCA_000701165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/165/GCA_000701165.2_ASM70116v2	-	JBK9
Burkholderia cenocepacia HI2424	331272	PRJNA13918	13918	Proteobacteria	Betaproteobacteria	7.70284	66.8004	chromosome 1:NC_008542.1/CP000458.1; chromosome 2:NC_008543.1/CP000459.1; chromosome 3:NC_008544.1/CP000460.1; plasmid Plasmid1:NC_008545.1/CP000461.1	-	4	7214	6943	10/25/06	5/18/17	Complete Genome	US DOE Joint Genome Institute	SAMN00113327	GCA_000203955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/203/955/GCA_000203955.1_ASM20395v1	-	HI2424
Lysobacter capsici	435897	PRJNA406855	406855	Proteobacteria	Gammaproteobacteria	6.27042	66.8	chromosome:CP023465.1	-	1	5086	4956	9/25/17	9/25/17	Complete Genome	"Shin's Lab., Kyungpook National University"	SAMN07632944	GCA_002355295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/295/GCA_002355295.1_ASM235529v1	-	KNU-14
Stenotrophomonas rhizophila	216778	PRJNA326321	326321	Proteobacteria	Gammaproteobacteria	4.19865	66.8	chromosome:NZ_CP016294.1/CP016294.1	-	1	3763	3661	8/12/16	4/13/17	Complete Genome	"College of Life Sciences, Northwest A&F University"	SAMN05276013	GCA_001704155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/155/GCA_001704155.1_ASM170415v1	-	QL-P4
Lysobacter antibioticus	84531	PRJNA298404	298404	Proteobacteria	Gammaproteobacteria	5.76518	66.8	chromosome:NZ_CP013141.1/CP013141.1	-	1	4752	4603	11/12/15	4/11/17	Complete Genome	"Rutgers, The State University of New Jersey"	SAMN04158598	GCA_001442535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/535/GCA_001442535.1_ASM144253v1	-	ATCC 29479
Lysobacter antibioticus	84531	PRJNA271656	271656	Proteobacteria	Gammaproteobacteria	5.91639	66.8	chromosome:NZ_CP011129.1/CP011129.1	-	1	4848	4682	11/12/15	4/11/17	Complete Genome	NIOO-KNAW	SAMN03275727	GCA_001442745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/745/GCA_001442745.1_ASM144274v1	26597042	76
Stenotrophomonas maltophilia D457	1163399	PRJEA89665	89665	Proteobacteria	Gammaproteobacteria	4.76916	66.8	chromosome:NC_017671.1/HE798556.1	-	1	4444	4277	4/11/12	6/15/17	Complete Genome	University of Valencia	SAMEA2272378	GCA_000284595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/595/GCA_000284595.1_ASM28459v1	22689246	D457
Segniliparus rotundus DSM 44985	640132	PRJNA37711	37711	Terrabacteria group	Actinobacteria	3.15753	66.8	chromosome:NC_014168.1/CP001958.1	-	1	3086	2987	5/18/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598516	GCA_000092825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/825/GCA_000092825.1_ASM9282v1	21304703	DSM 44985
Acidovorax ebreus TPSY	535289	PRJNA29975	29975	Proteobacteria	Betaproteobacteria	3.79657	66.8	chromosome:NC_011992.1/CP001392.1	-	1	3612	3453	1/27/09	8/21/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00001444	GCA_000022305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/305/GCA_000022305.1_ASM2230v1	20023012	TPSY
Burkholderia ambifaria AMMD	339670	PRJNA240122	240122	Proteobacteria	Betaproteobacteria	7.52858	66.7904	chromosome 1:NZ_CP009798.1/CP009798.1; chromosome 2:NZ_CP009799.1/CP009799.1; chromosome 3:NZ_CP009800.1/CP009800.1; plasmid pBII_1:NZ_CP009797.1/CP009797.1	-	4	6854	6555	3/20/15	4/10/17	Complete Genome	Los Alamos National Laboratory	SAMN03140296	GCA_000959545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/545/GCA_000959545.1_ASM95954v1	25931592	AMMD
Burkholderia ambifaria AMMD	339670	PRJNA13490	13490	Proteobacteria	Betaproteobacteria	7.52857	66.7904	chromosome 1:NC_008390.1/CP000440.1; chromosome 2:NC_008391.1/CP000441.1; chromosome 3:NC_008392.1/CP000442.1; plasmid Plasmid1:NC_008385.1/CP000443.1	-	4	6868	6546	9/21/06	8/28/17	Complete Genome	DOE Joint Genome Institute	SAMN02598309	GCA_000203915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/203/915/GCA_000203915.1_ASM20391v1	-	AMMD
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.02876	66.7888	chromosome 1:NZ_CP013446.1/CP013446.1; chromosome 2:NZ_CP013447.1/CP013447.1; chromosome 3:NZ_CP013445.1/CP013445.1	-	3	7241	6884	9/2/16	3/28/17	Complete Genome	Northern Arizona University	SAMN03449449	GCA_001718855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/855/GCA_001718855.1_ASM171885v1	-	MSMB1189WGS
Paracoccus denitrificans PD1222	318586	PRJNA13020	13020	Proteobacteria	Alphaproteobacteria	5.23619	66.783	chromosome 1:NC_008686.1/CP000489.1; chromosome 2:NC_008687.1/CP000490.1; plasmid 1:NC_008688.1/CP000491.1	-	3	5174	4993	12/13/06	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02598290	GCA_000203895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/203/895/GCA_000203895.1_ASM20389v1	-	PD1222
Ralstonia solanacearum FJAT-1458	1130828	PRJNA329182	329182	Proteobacteria	Betaproteobacteria	6.0599	66.7685	chromosome:NZ_CP016554.1/CP016554.1; plasmid plas1:NZ_CP016555.1/CP016555.1	-	2	5442	5166	11/30/16	4/6/17	Complete Genome	Fujian Academy of Agricultural Science	SAMN05392572	GCA_001887535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/535/GCA_001887535.1_ASM188753v1	-	FJAT-1458
Leuconostoc pseudomesenteroides PS12	1339247	PRJNA205547	205547	Terrabacteria group	Firmicutes	1.93438	39.1	-	JDVA01	91	1975	1820	5/8/14	4/9/17	Scaffold	Copenhagen University	SAMN02767912	GCA_000686505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/505/GCA_000686505.1_Leuconostoc	24903866	PS12
Rubrobacter radiotolerans	42256	PRJNA241417	241417	Terrabacteria group	Actinobacteria	3.26723	66.7537	chromosome:NZ_CP007514.1/CP007514.1; plasmid 1:NZ_CP007515.1/CP007515.1; plasmid 2:NZ_CP007516.1/CP007516.1; plasmid 3:NZ_CP007517.1/CP007517.1	-	4	3166	3068	5/1/14	4/17/17	Complete Genome	Biocant	SAMN02708830	GCA_000661895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/895/GCA_000661895.1_ASM66189v1	-	RSPS-4
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.90237	66.7484	chromosome 1:NZ_CP013366.1/CP013366.1; chromosome 2:NZ_CP013365.1/CP013365.1; chromosome 3:NZ_CP013367.1/CP013367.1	-	3	6315	6055	9/2/16	4/5/17	Complete Genome	Northern Arizona University	SAMN03449137	GCA_001718335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/335/GCA_001718335.1_ASM171833v1	-	RF8-non-BP5
Burkholderia cenocepacia	95486	PRJNA316047	316047	Proteobacteria	Betaproteobacteria	8.73148	66.7356	chromosome 1:NZ_CP015036.1/CP015036.1; chromosome 2:NZ_CP015037.1/CP015037.1; plasmid pBcp895-1:NZ_CP015038.1/CP015038.1	-	3	8284	7912	4/4/16	3/28/17	Complete Genome	University of Malaya	SAMN04574071	GCA_001606135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/135/GCA_001606135.1_ASM160613v1	-	895
Corynebacterium doosanense CAU 212 = DSM 45436	558173	PRJNA219342	219342	Terrabacteria group	Actinobacteria	2.699	66.7345	chromosome:NZ_CP006764.1/CP006764.1; plasmid pCdoos1:NZ_CP006765.1/CP006765.1	-	2	2635	2508	10/16/14	4/9/17	Complete Genome	Bielefeld University	SAMN02356458	GCA_000767055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/055/GCA_000767055.1_ASM76705v1	-	CAU 212
Burkholderia cepacia GG4	1009846	PRJNA66091	66091	Proteobacteria	Betaproteobacteria	6.46732	66.7142	chromosome 1:NC_018513.1/CP003774.1; chromosome 2:NC_018514.1/CP003775.1	-	2	6066	5749	8/27/12	5/18/17	Complete Genome	U Malaya	SAMN02604072	GCA_000292915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/915/GCA_000292915.1_ASM29291v1	23105060	GG4
Aureimonas sp. AU20	1349819	PRJNA209311	209311	Proteobacteria	Alphaproteobacteria	5.21086	66.7129	chromosome:NZ_CP006367.1/CP006367.1; plasmid pAU20a:NZ_CP006368.1/CP006368.1; plasmid pAU20b:NZ_CP006369.1/CP006369.1; plasmid pAU20c:NZ_CP006370.1/CP006370.1; plasmid pAU20d:NZ_CP006371.1/CP006371.1; plasmid pAU20e:NZ_CP006372.1/CP006372.1; plasmid pAU20f:NZ_CP006373.1/CP006373.1; plasmid pAU20g:NZ_CP006374.1/CP006374.1; plasmid pAU20rrn:NZ_CP006375.1/CP006375.1	-	9	4739	4624	11/12/15	4/11/17	Complete Genome	"Graduate School of Life Sciences, Tohoku University"	SAMN04236815	GCA_001442755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/755/GCA_001442755.1_ASM144275v1	26534993	AU20
Ralstonia solanacearum	305	PRJNA288736	288736	Proteobacteria	Betaproteobacteria	6.04297	66.7039	chromosome:NZ_CP015115.1/CP015115.1; plasmid unnamed:NZ_CP015116.1/CP015116.1	-	2	5400	5144	12/8/16	4/6/17	Complete Genome	South China Agriculture University	SAMN03837633	GCA_001891105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/105/GCA_001891105.1_ASM189110v1	-	EP1
Ralstonia solanacearum	305	PRJNA314427	314427	Proteobacteria	Betaproteobacteria	5.75213	66.7005	chromosome:NZ_CP015850.1/CP015850.1; plasmid unnamed:NZ_CP015851.1/CP015851.1	-	2	5142	4892	6/16/16	4/5/17	Complete Genome	"Guangdong Academy of Agricultural Sciences,Plant  Protection Research Institute"	SAMN04537371	GCA_001663415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/415/GCA_001663415.1_ASM166341v1	-	YC40-M
Dethiosulfovibrio peptidovorans DSM 11002	469381	PRJNA20741	20741	Synergistetes	Synergistia	2.57636	54.4	-	ABTR02	3	2500	2399	4/30/09	4/17/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN02441810	GCA_000172975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/975/GCA_000172975.1_ASM17297v1	21304695	DSM 11002
Diaphorobacter polyhydroxybutyrativorans	1546149	PRJNA325173	325173	Proteobacteria	Betaproteobacteria	4.06128	66.7	chromosome:NZ_CP016278.1/CP016278.1	-	1	3798	3639	7/5/17	7/7/17	Complete Genome	Beijing Agro-Biotechnology Research Center	SAMN05284426	GCA_002214645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/645/GCA_002214645.1_ASM221464v1	26012582	SL-205
Stenotrophomonas sp. LM091	1904944	PRJNA344031	344031	Proteobacteria	Gammaproteobacteria	4.31745	66.7	chromosome:NZ_CP017483.1/CP017483.1	-	1	3862	3704	10/21/16	4/13/17	Complete Genome	cirad	SAMN05818440	GCA_001806305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/305/GCA_001806305.1_ASM180630v1	-	LM091
Pseudomonas aeruginosa	287	PRJNA296749	296749	Proteobacteria	Gammaproteobacteria	6.12302	66.7	chromosome:CP013144.1	-	1	5629	5285	12/10/15	3/9/16	Complete Genome	njut	SAMN04102969	GCA_001465155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/465/155/GCA_001465155.1_ASM146515v1	-	Cu1510
Stenotrophomonas maltophilia	40324	PRJNA277366	277366	Proteobacteria	Gammaproteobacteria	4.804	66.7	chromosome 1:NZ_CP011010.1/CP011010.1	-	1	4381	4259	8/26/15	3/26/17	Complete Genome	Icahn School of Medicine at Mount Sinai	SAMN03389650	GCA_001274595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/274/595/GCA_001274595.1_ASM127459v1	26324280	ISMMS3
Oxalobacteraceae bacterium IMCC9480	937450	PRJNA61273	61273	Proteobacteria	Betaproteobacteria	4.5015	59.4	-	AEPR01	1077	4208	3782	4/6/11	5/19/17	Contig	"Division of Biology and Ocean Sciences,Inha University, College of Natural Sciences Inha University"	SAMN02469921	GCA_000195205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/205/GCA_000195205.2_ASM19520v1	21572000	IMCC9480
gamma proteobacterium IMCC1989	937772	PRJNA61275	61275	Proteobacteria	Gammaproteobacteria	3.01762	42.1	-	AEVK01	455	2908	2709	4/26/11	4/17/17	Contig	Inha university	SAMN02469924	GCA_000209515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/209/515/GCA_000209515.2_ASM20951v1	21602334	IMCC1989
Delftia sp. Cs1-4	742013	PRJNA46303	46303	Proteobacteria	Betaproteobacteria	6.68584	66.7	chromosome:NC_015563.1/CP002735.1	-	1	5973	5802	5/23/11	5/18/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713625	GCA_000214395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/395/GCA_000214395.1_ASM21439v1	-	Cs1-4
Burkholderia stabilis	95485	PRJDB5640	387569	Proteobacteria	Betaproteobacteria	7.7211	66.6947	chromosome 1:AP018111.1; chromosome 2:AP018112.1; chromosome 3:AP018113.1	-	3	6982	6895	5/20/17	8/26/17	Complete Genome	Fermlab Inc.	SAMD00078039	GCA_002356275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/275/GCA_002356275.1_ASM235627v1	-	FERMP-21014
Burkholderia multivorans ATCC 17616	395019	PRJDA19401	19401	Proteobacteria	Betaproteobacteria	7.00881	66.6924	chromosome 1:NC_010804.1/AP009385.1; chromosome 2:NC_010805.1/AP009386.1; chromosome 3:NC_010801.1/AP009387.1; plasmid pTGL1:NC_010802.1/AP009388.1	-	4	6737	6398	6/3/08	3/29/17	Complete Genome	Tohoku University	SAMD00060926	GCA_000010545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/545/GCA_000010545.1_ASM1054v1	-	ATCC 17616
Burkholderia multivorans ATCC 17616	395019	PRJNA17407	17407	Proteobacteria	Betaproteobacteria	7.00862	66.6924	chromosome 1:NC_010084.1/CP000868.1; chromosome 2:NC_010086.1/CP000869.1; chromosome 3:NC_010087.1/CP000870.1; plasmid pBMUL01:NC_010070.1/CP000871.1	-	4	6739	6397	11/15/07	7/9/17	Complete Genome	US DOE Joint Genome Institute	SAMN00623032	GCA_000018505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/505/GCA_000018505.1_ASM1850v1	-	ATCC 17616
Sphingomonas sp. MM-1	745310	PRJNA185470	185470	Proteobacteria	Alphaproteobacteria	4.63361	66.6882	chromosome:NC_020561.1/CP004036.1; plasmid pISP0:NC_020542.1/CP004037.1; plasmid pISP1:NC_020562.1/CP004038.1; plasmid pISP2:NC_020543.1/CP004039.1; plasmid pISP3:NC_020544.1/CP004040.1; plasmid pISP4:NC_020563.2/CP004041.2	-	6	4474	4285	3/20/13	4/17/17	Complete Genome	"Graduate School of Life Sciences, Tohoku University"	SAMN02603295	GCA_000347675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/675/GCA_000347675.2_ASM34767v2	23682148	MM-1
Sphingomonas sanxanigenens DSM 19645 = NX02	1123269	PRJNA213647	213647	Proteobacteria	Alphaproteobacteria	6.5803	66.6748	chromosome:NZ_CP006644.1/CP006644.1; plasmid pNXO2:NZ_CP011450.1/CP011450.1	-	2	6151	5951	12/30/13	4/17/17	Complete Genome	Nankai University	SAMN02641489	GCA_000512205.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/205/GCA_000512205.2_ASM51220v2	-	NX02
Lactobacillus farciminis KCTC 3681 = DSM 20184	936140	PRJNA61183	61183	Terrabacteria group	Firmicutes	2.49831	36.5	-	AEOT01	5	2462	2338	12/17/10	4/7/17	Scaffold	Korea Research Institute of Bioscience and Biotechnology (KRIBB)	SAMN02470200	GCA_000184535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/184/535/GCA_000184535.1_ASM18453v1	21257766	KCTC 3681
Sphingomonas hengshuiensis	1609977	PRJNA274606	274606	Proteobacteria	Alphaproteobacteria	5.22839	66.6711	chromosome:NZ_CP010836.1/CP010836.1; plasmid unnamed:NZ_CP010837.1/CP010837.1	-	2	4799	4642	2/26/15	4/10/17	Complete Genome	Hengshui University	SAMN03329624	GCA_000935025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/025/GCA_000935025.1_ASM93502v1	26410379	WHSC-8
Acetobacter pomorum DM001	945681	PRJNA60787	60787	Proteobacteria	Alphaproteobacteria	2.88342	52.3	-	AEUP01	66	2741	2583	3/24/11	4/7/17	Contig	"Division of molecular life science, Ewha Woman's University and National Creative Research Initiative Center for Symbiosystem"	SAMN02469765	GCA_000193245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/245/GCA_000193245.2_ASM19324v1	22053049	DM001
Ralstonia solanacearum	305	PRJNA297402	297402	Proteobacteria	Betaproteobacteria	5.53025	66.6626	chromosome:NZ_CP012943.1/CP012943.1; plasmid unnamed:NZ_CP012944.1/CP012944.1	-	2	4903	4659	3/11/16	4/5/17	Complete Genome	CIRAD	SAMN04123299	GCA_001587155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/155/GCA_001587155.1_ASM158715v1	26788428	IBSBF1503
Thiobacimonas profunda	1229727	PRJNA175613	175613	Proteobacteria	Alphaproteobacteria	5.42426	66.6415	chromosome:NZ_CP014796.1/CP014796.1; plasmid pTPRO1:NZ_CP014797.1/CP014797.1; plasmid pTPRO2:NZ_CP014798.1/CP014798.1; plasmid pTPRO3:NZ_CP014799.1/CP014799.1; plasmid pTPRO4:NZ_CP014800.1/CP014800.1; plasmid pTPRO5:NZ_CP014801.1/CP014801.1; plasmid pTPRO6:NZ_CP014802.1/CP014802.1; plasmid pTPRO7:NZ_CP014803.1/CP014803.1; plasmid pTPRO8:NZ_CP014804.1/CP014804.1	-	9	5156	4978	1/23/17	4/17/17	Complete Genome	"State Key Laboratory for Marine Environmental Science, Xiamen University, Xiamen, FuJian 361005, P.R. China"	SAMN04563574	GCA_001969385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/385/GCA_001969385.1_ASM196938v1	-	JLT2016
Ralstonia solanacearum Po82	1031711	PRJNA66837	66837	Proteobacteria	Betaproteobacteria	5.43026	66.6359	chromosome:NC_017574.1/CP002819.1; plasmid megaplasmid:NC_017575.1/CP002820.1	-	2	4867	4638	5/27/11	5/19/17	Complete Genome	"Institute of Plant Protection, Chinese Academy of Agricultural Sciences"	SAMN02603411	GCA_000215325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/325/GCA_000215325.1_ASM21532v1	21685279	Po82
Lactobacillus fructivorans	1614	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.41653	38.8	-	JQAS01	12	1440	1322	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02797768	GCA_001437175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/175/GCA_001437175.1_ASM143717v1	26415554	ATCC 27394
Deinococcus radiodurans R1	243230	PRJNA315481	315481	Terrabacteria group	Deinococcus-Thermus	3.34477	66.6184	chromosome 1:NZ_CP015081.1/CP015081.1; chromosome 2:NZ_CP015082.1/CP015082.1; plasmid CP1:NZ_CP015084.1/CP015084.1; plasmid MP1:NZ_CP015083.1/CP015083.1	-	4	3334	3047	5/6/16	4/12/17	Complete Genome	Zhejiang University	SAMN04562548	GCA_001638825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/825/GCA_001638825.1_ASM163882v1	-	R1
Corynebacterium maris DSM 45190	1224163	PRJNA172964	172964	Terrabacteria group	Actinobacteria	2.83355	66.6124	chromosome:NC_021915.1/CP003924.1; plasmid pCmaris1:NC_021920.1/CP003925.1	-	2	2652	2538	8/1/13	4/17/17	Complete Genome	"CeBiTec, Bielefeld University"	SAMN02603057	GCA_000442645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/645/GCA_000442645.1_ASM44264v1	-	DSM 45190
Deinococcus radiodurans R1	243230	PRJNA65	65	Terrabacteria group	Deinococcus-Thermus	3.28416	66.6067	chromosome 1:NC_001263.1/AE000513.1; chromosome 2:NC_001264.1/AE001825.1; plasmid CP1:NC_000959.1/AE001827.1; plasmid MP1:NC_000958.1/AE001826.1	-	4	3238	3167	11/2/99	8/3/16	Complete Genome	TIGR	SAMN02603976	GCA_000008565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/565/GCA_000008565.1_ASM856v1	10567266	R1
Gordonia neofelifaecis NRRL B-59395	644548	PRJNA61793	61793	Terrabacteria group	Actinobacteria	4.25729	68.2	-	AEUD01	47	3993	3847	3/15/11	5/18/17	Contig	"College of life Sciences, Sichuan Normal University,"	SAMN02470983	GCA_000192435.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/435/GCA_000192435.2_ASM19243v1	21742880	NRRL B-59395
Burkholderia multivorans	87883	PRJNA244058	244058	Proteobacteria	Betaproteobacteria	7.28187	66.6044	chromosome 1:NZ_CP008730.1/CP008730.1; chromosome 2:NZ_CP008729.1/CP008729.1; chromosome 3:NZ_CP008728.1/CP008728.1	-	3	6936	6544	9/18/14	4/2/17	Complete Genome	Los Alamos National Laboratory	SAMN02848467	GCA_000756005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/005/GCA_000756005.1_ASM75600v1	25414490	DDS 15A-1
Avibacterium paragallinarum JF4211	1351754	PRJEB3958	211322	Proteobacteria	Gammaproteobacteria	2.86925	41.1	-	CBMK01	34	3029	2634	7/11/13	4/10/17	Contig	SIB	SAMEA2272596	GCA_000442905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/905/GCA_000442905.1_AviparaA_JF4211	-	JF4211
Enterobacter mori LMG 25706	980518	PRJNA62277	62277	Proteobacteria	Gammaproteobacteria	4.96022	55.3	-	AEXB01	23	4770	4496	4/28/11	5/18/17	Scaffold	"Institute of Biotechnology, Zhejiang University"	SAMN02471025	GCA_000211415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/211/415/GCA_000211415.1_ASM21141v1	21602328	LMG 25706
Stenotrophomonas sp. WZN-1	2005046	PRJNA388045	388045	Proteobacteria	Gammaproteobacteria	4.5127	66.6	chromosome:NZ_CP021768.1/CP021768.1	-	1	4193	4070	6/13/17	6/15/17	Complete Genome	Nankai University	SAMN07192574	GCA_002192255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/255/GCA_002192255.1_ASM219225v1	-	WZN-1
Delftia acidovorans	80866	PRJNA297196	297196	Proteobacteria	Betaproteobacteria	6.55673	66.6	chromosome:CP019171.1	-	1	-	-	1/23/17	1/23/17	Complete Genome	"Banfield Lab, University of California, Berkeley"	SAMN04116731	GCA_001969245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/245/GCA_001969245.1_ASM196924v1	-	-
Pseudomonas aeruginosa	287	PRJNA291145	291145	Proteobacteria	Gammaproteobacteria	6.21303	66.6	chromosome:NZ_CP013477.1/CP013477.1	-	1	5856	5704	12/12/16	4/10/17	Complete Genome	Leibniz Institute DSMZ	SAMN03940423	GCA_001900195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/195/GCA_001900195.1_ASM190019v1	-	SCVFeb
Wolbachia endosymbiont wVitB of Nasonia vitripennis	941258	PRJNA61407	61407	Proteobacteria	Alphaproteobacteria	1.10764	34	-	AERW01	426	1029	845	4/17/11	4/17/17	Scaffold	Vanderbilt University	SAMN02472067	GCA_000204545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/545/GCA_000204545.1_WVB_1.0	21292630	-
Vibrio brasiliensis LMG 20546	945543	PRJNA61943	61943	Proteobacteria	Gammaproteobacteria	4.71503	45.8	-	AEVS01	116	4342	4233	2/11/11	5/19/17	Contig	FDA	SAMN02952918	GCA_000189255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/255/GCA_000189255.2_ASM18925v1	21930677	LMG 20546
Vibrio sinaloensis DSM 21326	945550	PRJNA61945	61945	Proteobacteria	Gammaproteobacteria	4.90491	45.8	-	AEVT01	135	4568	4437	2/11/11	5/19/17	Contig	FDA	SAMN02952919	GCA_000189275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/275/GCA_000189275.2_ASM18927v1	21930677	DSM 21326
Pseudomonas aeruginosa	287	PRJNA291144	291144	Proteobacteria	Gammaproteobacteria	6.21303	66.6	chromosome:NZ_CP013478.1/CP013478.1	-	1	5856	5704	12/12/16	4/10/17	Complete Genome	Leibniz Institute DSMZ	SAMN03940421	GCA_001900225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/225/GCA_001900225.1_ASM190022v1	-	SCVJan
Thiorhodococcus drewsii AZ1	765913	PRJNA62879	62879	Proteobacteria	Gammaproteobacteria	5.52419	62.3	-	AFWT01	141	4763	4477	8/19/11	5/19/17	Contig	DOE Joint Genome Institute	SAMN02256531	GCA_000224065.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/065/GCA_000224065.2_ASM22406v1	-	AZ1
Paraglaciecola agarilytica NO2	1125747	PRJDB23	176786	Proteobacteria	Gammaproteobacteria	5.65492	44	-	BAEK01	96	4935	4781	10/6/12	5/18/17	Contig	Shandong University	SAMD00036597	GCA_000314935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/935/GCA_000314935.1_ASM31493v1	25009843	NO2
Pseudomonas aeruginosa	287	PRJNA291143	291143	Proteobacteria	Gammaproteobacteria	6.21328	66.6	chromosome:NZ_CP013479.1/CP013479.1	-	1	5859	5708	12/12/16	4/10/17	Complete Genome	Leibniz Institute DSMZ	SAMN03940420	GCA_001900265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/265/GCA_001900265.1_ASM190026v1	-	NHmuc
Ornithinibacillus scapharcae TW25	981383	PRJNA63025	63025	Terrabacteria group	Firmicutes	3.84387	36.7	-	AEWH01	75	3880	3646	2/25/11	4/7/17	Contig	"Kyung Hee University, Republic of Korea"	SAMN02470211	GCA_000190475.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/475/GCA_000190475.2_ASM19047v1	21460087	TW25
Thiocapsa marina 5811	768671	PRJNA63055	63055	Proteobacteria	Gammaproteobacteria	5.59554	64.1	-	AFWV01	62	4933	4701	8/18/11	5/19/17	Contig	JGI	SAMN02261407	GCA_000223985.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/223/985/GCA_000223985.2_ASM22398v1	-	5811
Roseateles depolymerans	76731	PRJNA306798	306798	Proteobacteria	Betaproteobacteria	5.68172	66.6	chromosome:NZ_CP013729.1/CP013729.1	-	1	4860	4715	1/4/16	4/16/17	Complete Genome	Korea Research Institute of Bioscience and Biotechnology	SAMN04363976	GCA_001483865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/483/865/GCA_001483865.1_ASM148386v1	-	KCTC 42856
Candidatus Odyssella thessalonicensis L13	985867	PRJNA63085	63085	Proteobacteria	Alphaproteobacteria	2.84765	42	-	AEWF01	20	2524	2408	2/24/11	4/17/17	Contig	"Unité de Recherche en Maladies Infectieuses tropicales emergentes, Faculte de Medecine, Universite de Méditerannée, Marseilles, France"	SAMN02471331	GCA_000190415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/415/GCA_000190415.2_ASM19041v1	-	L13
Caldalkalibacillus thermarum TA2.A1	986075	PRJNA63105	63105	Terrabacteria group	Firmicutes	2.89546	47.6	-	AFCE01	251	2925	2757	5/26/11	4/17/17	Scaffold	University of Otago	SAMN02471911	GCA_000218765.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/765/GCA_000218765.2_ASM21876v1	21685297	TA2.A1
Rubrivivax benzoatilyticus JA2 = ATCC BAA-35	987059	PRJNA63127	63127	Proteobacteria	Betaproteobacteria	4.12994	71.6	-	AEWG01	164	3886	3662	2/23/11	5/19/17	Contig	"Department of Plant Sciences, School of Life Sciences, Central University P.O., University of Hyderabad, Hyderabad 500046, India"	SAMN02471805	GCA_000190375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/375/GCA_000190375.2_ASM19037v1	21478355	JA2
Streptomyces griseoaurantiacus M045	996637	PRJNA63573	63573	Terrabacteria group	Actinobacteria	7.71238	72.7	-	AEYX01	46	6823	6501	4/19/11	5/19/17	Contig	"Institute of Oceanology, Chinese Academy of Sciences"	SAMN02470039	GCA_000204605.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/605/GCA_000204605.2_ASM20460v1	21551298	M045
Verminephrobacter aporrectodeae subsp. tuberculatae At4	565443	PRJNA63657	63657	Proteobacteria	Betaproteobacteria	4.6818	65.7	-	AFAL01	1082	4284	3510	3/23/11	5/19/17	Contig	"Aarhus University, Denmark"	SAMN02393706	GCA_000193225.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/225/GCA_000193225.2_ASM19322v1	22333491	At4
Lysobacter capsici	435897	PRJNA271656	271656	Proteobacteria	Gammaproteobacteria	6.39189	66.6	chromosome:NZ_CP011130.1/CP011130.1	-	1	5207	5064	11/12/15	4/11/17	Complete Genome	NIOO-KNAW	SAMN03275728	GCA_001442785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/785/GCA_001442785.1_ASM144278v1	26597042	55
Pseudomonas aeruginosa DK1	1356855	PRJEB9823	314208	Proteobacteria	Gammaproteobacteria	6.21253	66.6	chromosome I:NZ_LN870292.1/LN870292.1	-	1	5859	5711	11/3/15	6/12/17	Complete Genome	DTU Systems Biology	SAMEA3484633	GCA_900069025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/069/025/GCA_900069025.1_ASM90006902v1	-	DK1 substr. NH57388A
Salinarchaeum sp. Harcht-Bsk1	1333523	PRJNA202311	202311	Euryarchaeota	Halobacteria	3.25526	66.6	chromosome:NC_021313.1/CP005962.1	-	1	3058	2978	5/30/13	4/8/17	Complete Genome	Baltic Federal University	SAMN02602994	GCA_000403645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/645/GCA_000403645.1_ASM40364v1	23868130	Harcht-Bsk1
Flectobacillus major DSM 103	929703	PRJNA63323	63323	FCB group	Bacteroidetes/Chlorobi group	6.22103	37.8	-	ATXY01	7	4898	4795	7/15/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN00262208	GCA_000427405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/405/GCA_000427405.1_ASM42740v1	-	DSM 103
Pseudomonas aeruginosa PAO1	208964	PRJNA331	331	Proteobacteria	Gammaproteobacteria	6.2644	66.6	chromosome:NC_002516.2/AE004091.2	-	1	5697	5572	5/16/00	8/3/16	Complete Genome	PathoGenesis Corporation	SAMN02603714	GCA_000006765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/006/765/GCA_000006765.1_ASM676v1	"109,840,431,264,447,000,000,000"	PAO1
Saccharomonospora glauca K62	928724	PRJNA63505	63505	Terrabacteria group	Actinobacteria	4.56411	69.0872	chromosome:NZ_CM001484.1/CM001484.1; plasmid pSACGL01:NZ_CM001485.1/CM001485.1	AGJI02	2	4335	4193	1/23/12	5/19/17	Chromosome	JGI	SAMN02441787	GCA_000243395.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/395/GCA_000243395.3_ASM24339v3	-	K62
Rhodobacter capsulatus SB 1003	272942	PRJNA55	55	Proteobacteria	Alphaproteobacteria	3.87192	66.5966	chromosome:NC_014034.1/CP001312.1; plasmid pRCB133:NC_014035.1/CP001313.1	-	2	3660	3531	4/9/10	3/30/17	Complete Genome	Univ. Chicago	SAMN02604080	GCA_000021865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/865/GCA_000021865.1_ASM2186v1	20418398	SB 1003
Novosphingobium nitrogenifigens DSM 19370	983920	PRJNA62735	62735	Proteobacteria	Alphaproteobacteria	4.18265	63.8	-	AEWJ01	32	3758	3653	3/15/11	5/19/17	Scaffold	Scion	SAMN02470891	GCA_000192575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/575/GCA_000192575.1_NovNit_2.0	22156397	DSM 19370
Burkholderia cepacia ATCC 25416	983594	PRJNA298860	298860	Proteobacteria	Betaproteobacteria	8.60595	66.5956	chromosome 3:NZ_CP012983.1/CP012983.1; chromosome 1:NZ_CP012981.1/CP012981.1; chromosome 2:NZ_CP012982.1/CP012982.1; plasmid pBC25416:NZ_CP012984.1/CP012984.1	-	4	8014	7614	10/22/15	4/4/17	Complete Genome	Kyungpook National University	SAMN04167160	GCA_001411495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/495/GCA_001411495.1_ASM141149v1	-	UCB 717
Burkholderia cenocepacia MC0-3	406425	PRJNA17929	17929	Proteobacteria	Betaproteobacteria	7.97139	66.5829	chromosome 1:NC_010508.1/CP000958.1; chromosome 2:NC_010515.1/CP000959.1; chromosome 3:NC_010512.1/CP000960.1	-	3	7426	7102	3/13/08	5/18/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598404	GCA_000019505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/505/GCA_000019505.1_ASM1950v1	-	MC0-3
Burkholderia cepacia	292	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	8.56972	66.5819	chromosome 3:NZ_CP022082.1/CP022082.1; chromosome 1:NZ_CP022083.1/CP022083.1; chromosome 2:NZ_CP022084.1/CP022084.1; plasmid unnamed1:NZ_CP022081.1/CP022081.1	-	4	7984	7537	6/27/17	6/29/17	Complete Genome	US Food and Drug Administration 	SAMN06173358	GCA_002209085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/085/GCA_002209085.1_ASM220908v1	-	FDAARGOS_345
Halobacterium hubeiense	1407499	PRJEB4726	306231	Euryarchaeota	Halobacteria	3.13035	66.576	chromosome I:NZ_LN831302.1/LN831302.1; plasmid II:NZ_LN831303.1/LN831303.1; plasmid III:NZ_LN831304.1/LN831304.1; plasmid IV:NZ_LN831305.1/LN831305.1	-	4	3251	3143	12/17/15	4/11/17	Complete Genome	UH	SAMEA3305703	GCA_001488575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/575/GCA_001488575.1_Halobacterium_hubeiense_JI20-1	-	JI20-1
Ralstonia solanacearum	305	PRJNA278086	278086	Proteobacteria	Betaproteobacteria	5.41168	66.5739	chromosome:NZ_CP012687.1/CP012687.1; plasmid unnamed:NZ_CP012688.1/CP012688.1	-	2	4797	4548	9/25/15	4/4/17	Complete Genome	University of Sao Paulo	SAMN03402637	GCA_001299555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/555/GCA_001299555.1_ASM129955v1	-	UY031
Patulibacter minatonensis DSM 18081	929712	PRJNA63851	63851	Terrabacteria group	Actinobacteria	5.52181	74.1	-	JAFH01	1	5063	4891	1/10/14	4/17/17	Scaffold	JGI	SAMN02584907	GCA_000519325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/325/GCA_000519325.1_ASM51932v1	-	DSM 18081
Acidovorax radicis N35	999386	PRJNA64465	64465	Proteobacteria	Betaproteobacteria	5.53023	64.9	-	AFBG01	30	5061	4921	4/13/11	5/18/17	Contig	"Helmholtz Zentrum Muenchen, Department Microbe-Plant Interactions"	SAMN02469888	GCA_000204195.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/195/GCA_000204195.2_ASM20419v1	-	N35
Methyloversatilis universalis FAM5	1000565	PRJNA64645	64645	Proteobacteria	Betaproteobacteria	4.23461	67	-	AFHG01	60	3921	3800	5/19/11	6/20/17	Contig	"Bumgarner laboratory, Department of Microbiology, University of Washington"	SAMN02471991	GCA_000214035.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/035/GCA_000214035.2_ASM21403v1	21725020	FAM5
Ralstonia solanacearum	305	PRJNA297400	297400	Proteobacteria	Betaproteobacteria	5.59624	66.5684	chromosome:NZ_CP012939.1/CP012939.1; plasmid pUW163a:NZ_CP012941.1/CP012941.1; plasmid pUW163b:NZ_CP012942.1/CP012942.1; plasmid unnamed:NZ_CP012940.1/CP012940.1	-	4	5012	4759	3/11/16	4/5/17	Complete Genome	CIRAD	SAMN04123295	GCA_001587135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/135/GCA_001587135.1_ASM158713v1	26788428	UW163
Defluviimonas alba	1335048	PRJNA291966	291966	Proteobacteria	Alphaproteobacteria	4.98761	66.5215	chromosome:NZ_CP012661.1/CP012661.1; plasmid cai42_plasmidA:NZ_CP012662.1/CP012662.1; plasmid cai42_plasmidB:NZ_CP012663.1/CP012663.1; plasmid cai42_plasmidC:NZ_CP012664.1/CP012664.1	-	4	4814	4248	4/15/16	4/17/17	Complete Genome	Peking University	SAMN03956960	GCA_001620265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/265/GCA_001620265.1_ASM162026v1	-	cai42
Neisseria macacae ATCC 33926	997348	PRJNA64729	64729	Proteobacteria	Betaproteobacteria	2.74837	51.1	-	AFQE01	66	2698	2445	7/13/11	8/4/17	Scaffold	Baylor College of Medicine	SAMN02299447	GCA_000220865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/865/GCA_000220865.1_ASM22086v1	-	ATCC 33926
Prevotella pallens ATCC 700821	997353	PRJNA64739	64739	FCB group	Bacteroidetes/Chlorobi group	3.1276	37.7	-	AFPY01	40	2566	2389	7/7/11	4/17/17	Scaffold	Baylor College of Medicine	SAMN00262640	GCA_000220255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/255/GCA_000220255.1_ASM22025v1	-	ATCC 700821
Sporosarcina newyorkensis 2681	1027292	PRJNA64749	64749	Terrabacteria group	Firmicutes	3.72736	42.3	-	AFPZ01	42	3619	3467	7/7/11	4/7/17	Scaffold	Baylor College of Medicine	SAMN00262641	GCA_000220335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/335/GCA_000220335.1_ASM22033v1	-	2681
Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988	1121101	PRJNA170350	170350	FCB group	Bacteroidetes/Chlorobi group	5.31545	41.9	-	AQHX01	6	4188	4017	4/23/13	4/8/17	Scaffold	Broad Institute	SAMN02596943	GCA_000381365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/365/GCA_000381365.1_Bact_saly_DSM_18765_V1	-	DSM 18765
Bacteroides nordii CL02T12C05	997884	PRJNA64823	64823	FCB group	Bacteroidetes/Chlorobi group	5.71828	40.8	-	AGXS01	10	4519	4321	6/25/12	5/18/17	Scaffold	Broad Institute	SAMN02463927	GCA_000273175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/175/GCA_000273175.1_Bact_nord_CL02T12C05_V1	-	CL02T12C05
Eggerthia catenaformis OT 569 = DSM 20559	999415	PRJNA64881	64881	Terrabacteria group	Firmicutes	1.94516	32.8	-	AGEJ01	8	1951	1796	2/12/13	4/8/17	Scaffold	Broad Institute	SAMN02596729	GCA_000340375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/375/GCA_000340375.1_Lact_cate_OT_569_V1	-	OT 569
Parabacteroides goldsteinii DSM 19448 = WAL 12034	927665	PRJNA170353	170353	FCB group	Bacteroidetes/Chlorobi group	6.48676	43.4	-	AQHV01	7	5050	4825	4/7/15	6/12/17	Scaffold	Broad Institute	SAMN03383454	GCA_000969835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/835/GCA_000969835.1_Para_gold_DSM_19448_V1	-	DSM 19448
Saccharopolyspora spinosa NRRL 18395	994479	PRJNA63283	63283	Terrabacteria group	Actinobacteria	8.58192	67.9	-	AEYC01	22	8005	7088	3/28/11	5/19/17	Scaffold	"Microbial Genome Research Center, CASPMI, IM-CAS"	SAMN02470034	GCA_000194155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/155/GCA_000194155.1_ASM19415v1	21478350	NRRL 18395
Leptospira weilii serovar Topaz str. LT2116	1088540	PRJNA74173	74173	Spirochaetes	Spirochaetia	4.32331	40.5	-	AHOR02	83	4479	3438	1/24/12	5/19/17	Contig	J. Craig Venter Institute	SAMN00739295	GCA_000244815.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/815/GCA_000244815.3_gls454188v02	-	LT2116
Leptospira noguchii serovar Panama str. CZ214	1001595	PRJNA167231	167231	Spirochaetes	Spirochaetia	4.71092	35.5	-	AKWY02	35	4352	3952	10/17/12	4/11/17	Contig	J. Craig Venter Institute	SAMN02436411	GCA_000306255.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/255/GCA_000306255.2_gls454059v02	-	CZ214
Burkholderia lata	482957	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.35484	66.5044	chromosome 1:NZ_CP013404.1/CP013404.1; chromosome 2:NZ_CP013406.1/CP013406.1; chromosome 3:NZ_CP013405.1/CP013405.1	-	3	7684	7340	9/2/16	4/13/17	Complete Genome	Northern Arizona University	SAMN03449255	GCA_001718575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/575/GCA_001718575.1_ASM171857v1	-	FL-7-5-30-S1-D0
Leptospira licerasiae serovar Varillal str. VAR 010	1049972	PRJNA74167	74167	Spirochaetes	Spirochaetia	4.21115	41.1	-	AHOO02	14	3946	3874	1/24/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436421	GCA_000244755.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/755/GCA_000244755.3_ASM24475v3	23145189	VAR 010
Photobacterium leiognathi	553611	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.60732	40.9	-	JZSK01	144	4164	3827	3/10/15	4/3/17	Contig	FDA/CFSAN	SAMN03295485	GCA_000950415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/415/GCA_000950415.1_CFSAN029437_01.0	-	ATCC 25521
Burkholderia cenocepacia	95486	PRJNA244015	244015	Proteobacteria	Betaproteobacteria	6.61242	66.5019	chromosome 1:NZ_CP007781.1/CP007781.1; chromosome 2:NZ_CP007780.1/CP007780.1; chromosome 3:NZ_CP007779.1/CP007779.1	-	3	6052	5759	9/18/14	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN02796570	GCA_000764955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/955/GCA_000764955.1_ASM76495v1	25414490	DWS 37E-2
Mycobacterium pallens	370524	PRJNA385068	385068	Terrabacteria group	Actinobacteria	6.03702	66.5	chromosome:CP023435.1	-	1	-	-	9/21/17	9/21/17	Complete Genome	Chung-Ang University	SAMN06858920	GCA_002335685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/685/GCA_002335685.1_ASM233568v1	-	PYR15
Sphingopyxis sp. QXT-31	1357916	PRJNA361373	361373	Proteobacteria	Alphaproteobacteria	4.28503	66.5	chromosome:NZ_CP019449.1/CP019449.1	-	1	4087	3997	2/3/17	4/17/17	Complete Genome	Chinese Academy of Sciences	SAMN06232497	GCA_001984035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/035/GCA_001984035.1_ASM198403v1	-	QXT-31
Prevotella maculosa DSM 19339 = JCM 15638	1122986	PRJNA187117	187117	FCB group	Bacteroidetes/Chlorobi group	3.31424	47.4	-	ARNR01	60	2759	2585	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440499	GCA_000382385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/385/GCA_000382385.1_ASM38238v1	-	DSM 19339
Pseudomonas aeruginosa	287	PRJEB18612	368826	Proteobacteria	Gammaproteobacteria	6.28864	66.5	chromosome PcyII-10:NZ_LT673656.1/LT673656.1	-	1	5911	5770	1/26/17	3/22/17	Complete Genome	INSTITUT DE GENETIQUE ET MICROBIOLOGIE	SAMEA26686918	GCA_900149285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/285/GCA_900149285.1_PcyII-10	-	-
Thermanaerovibrio velox DSM 12556	926567	PRJNA65505	65505	Synergistetes	Synergistia	1.88084	58.8	chromosome:NZ_CM001377.1/CM001377.1	AHGV01	1	1808	1672	12/12/11	4/17/17	Chromosome	JGI	SAMN02261421	GCA_000237825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/825/GCA_000237825.1_ASM23782v1	-	DSM 12556
Mycobacterium sp. WY10	1920667	PRJNA353164	353164	Terrabacteria group	Actinobacteria	6.04141	66.5	chromosome:NZ_CP018043.1/CP018043.1	-	1	5901	5680	11/28/16	4/16/17	Complete Genome	Zhejiang University	SAMN06011242	GCA_001886515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/515/GCA_001886515.1_ASM188651v1	-	WY10
Halonatronum saccharophilum DSM 13868	926692	PRJNA65553	65553	Terrabacteria group	Firmicutes	2.88452	33.5	-	AZYG01	8	2736	2563	1/8/14	4/17/17	Scaffold	JGI	SAMN02597283	GCA_000517025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/025/GCA_000517025.1_ASM51702v1	-	DSM 13868
Paenibacillus elgii B69	1007103	PRJNA65565	65565	Terrabacteria group	Firmicutes	7.96207	52.6	-	AFHW01	278	7531	7125	5/12/11	5/19/17	Contig	Zhejiang University	SAMN02470015	GCA_000213315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/315/GCA_000213315.2_ASM21331v1	21705583	B69
Oscillatoriales cyanobacterium JSC-12	864702	PRJNA66005	66005	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.53049	47.5	chromosome:NZ_CM001633.1/CM001633.1	AJUB01	1	10000	9518	11/5/12	4/17/17	Chromosome	JGI	SAMN02261267	GCA_000309945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/945/GCA_000309945.1_ASM30994v1	-	JSC-12
SAR324 cluster bacterium SCGC AAA001-C10	913329	PRJNA66015	66015	Proteobacteria	delta/epsilon subdivisions	2.15859	41.1	-	AFIB01	402	-	-	5/12/11	7/29/15	Scaffold	US DOE Joint Genome Institute (JGI-PGF)	SAMN00259745	GCA_000213335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/335/GCA_000213335.2_ASM21333v2	21885783	SCGC AAA001-C10
SAR324 cluster bacterium SCGC AAA240-J09	913331	PRJNA66017	66017	Proteobacteria	delta/epsilon subdivisions	2.26384	41.5	-	AFIA01	647	-	-	5/12/11	7/29/15	Scaffold	US DOE Joint Genome Institute (JGI-PGF)	SAMN00260149	GCA_000213355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/355/GCA_000213355.2_ASM21335v2	21885783	SCGC AAA240-J09
gamma proteobacterium SCGC AAA001-B15	913324	PRJNA66019	66019	Proteobacteria	Gammaproteobacteria	0.771017	36.9	-	AFHZ01	190	-	-	5/12/11	7/29/15	Scaffold	US DOE Joint Genome Institute (JGI-PGF)	SAMN00260143	GCA_000213375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/375/GCA_000213375.2_ASM21337v1	21885783	SCGC AAA001-B15
gamma proteobacterium SCGC AAA007-O20	913327	PRJNA66021	66021	Proteobacteria	Gammaproteobacteria	1.02811	38.1	-	AFHY01	166	-	-	5/12/11	7/29/15	Scaffold	US DOE Joint Genome Institute (JGI-PGF)	SAMN00260145	GCA_000213395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/395/GCA_000213395.2_ASM21339v2	21885783	SCGC AAA007-O20
Lacunisphaera limnophila	1838286	PRJNA319155	319155	PVC group	Verrucomicrobia	4.19928	66.5	chromosome:NZ_CP016094.1/CP016094.1	-	1	3570	3471	9/26/16	4/13/17	Complete Genome	Leibniz-Institute DSMZ German Collection of Microorganisms and Cell Cultures	SAMN04880612	GCA_001746835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/835/GCA_001746835.1_ASM174683v1	-	IG16b
Cryptosporangium arvum DSM 44712	927661	PRJNA66321	66321	Terrabacteria group	Actinobacteria	9.19599	71.7	-	JFBT01	1	8599	8226	3/3/14	4/17/17	Scaffold	JGI	SAMN02849401	GCA_000585375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/375/GCA_000585375.1_ASM58537v1	-	DSM 44712
Methylophaga aminisulfidivorans MP	1026882	PRJNA66315	66315	Proteobacteria	Gammaproteobacteria	3.26196	43.4	-	AFIG01	3	3138	3064	5/23/11	4/17/17	Contig	Chosun University	SAMN02469574	GCA_000214595.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/595/GCA_000214595.2_ASM21459v1	21685284	MP
Deinococcus pimensis DSM 21231	926554	PRJNA66373	66373	Terrabacteria group	Deinococcus-Thermus	4.76581	69.3	-	AZYF01	67	5030	4081	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02584908	GCA_000519345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/345/GCA_000519345.1_ASM51934v1	-	DSM 21231
Bradyrhizobiaceae bacterium SG-6C	709797	PRJNA66409	66409	Proteobacteria	Alphaproteobacteria	4.33639	61.8499	chromosome:NZ_CM001195.1/CM001195.1	AFOF01	1	8475	8319	6/27/11	5/18/17	Chromosome	"CSIRO Ecosystem Sciences, Black Mountain Laboratories, Acton, Australia"	SAMN02469695	GCA_000219645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/645/GCA_000219645.1_ASM21964v1	21742875	SG-6C
Promicromonospora kroppenstedtii DSM 19349	926564	PRJNA66563	66563	Terrabacteria group	Actinobacteria	5.80215	70.9	-	AZXR01	209	6116	4521	1/3/14	4/17/17	Scaffold	JGI	SAMN02597274	GCA_000515355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/355/GCA_000515355.1_ASM51535v1	-	DSM 19349
Haemophilus haemolyticus M19501	1028803	PRJNA66573	66573	Proteobacteria	Gammaproteobacteria	1.88491	38.5	-	AFQO01	22	1845	1697	7/29/11	3/30/17	Contig	"Meningitis and Vaccine Preventable Diseases Branch, Centers for Disease Control and Prevention"	SAMN02952884	GCA_000222025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/025/GCA_000222025.2_ASM22202v2	21952546	M19501
Pseudomonas aeruginosa	287	PRJNA340360	340360	Proteobacteria	Gammaproteobacteria	6.27643	66.5	chromosome:NZ_CP017149.1/CP017149.1	-	1	5925	5782	9/16/16	3/20/17	Complete Genome	"Dalian Hissen Bio-pharm., Ltd."	SAMN05715193	GCA_001729505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/505/GCA_001729505.1_ASM172950v1	-	ATCC 15692
Pseudomonas aeruginosa SJTD-1	1193501	PRJNA167272	167272	Proteobacteria	Gammaproteobacteria	6.24383	66.5	chromosome:NZ_CP015877.1/CP015877.1	-	1	5863	5739	6/2/16	3/20/17	Complete Genome	Shanghai Jiao Tong University	SAMN02470939	GCA_000271985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/985/GCA_000271985.2_ASM27198v2	22887679	SJTD-1
Pseudomonas aeruginosa	287	PRJNA253624	253624	Proteobacteria	Gammaproteobacteria	6.32246	66.5	chromosome:NZ_CP008867.1/CP008867.1	-	1	5923	5691	1/15/16	3/19/17	Complete Genome	MSKCC	SAMN02894348	GCA_001516005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/005/GCA_001516005.1_ASM151600v1	-	T52373
Pseudomonas aeruginosa	287	PRJNA253624	253624	Proteobacteria	Gammaproteobacteria	6.33438	66.5	chromosome:NZ_CP008859.2/CP008859.2	-	1	5968	5829	1/15/16	4/17/17	Complete Genome	MSKCC	SAMN02894355	GCA_001516305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/305/GCA_001516305.2_ASM151630v2	-	H5708
Corynebacterium nuruki S6-4	863239	PRJNA66913	66913	Terrabacteria group	Actinobacteria	3.10659	69.5	-	AFIZ01	68	2822	2704	5/17/11	4/17/17	Contig	Kyung Hee Univ.	SAMN02470217	GCA_000213935.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/935/GCA_000213935.2_ASM21393v1	21685278	S6-4
Lysobacter gummosus	262324	PRJNA271656	271656	Proteobacteria	Gammaproteobacteria	6.05662	66.5	chromosome:NZ_CP011131.1/CP011131.1	-	1	4954	4833	11/12/15	4/16/17	Complete Genome	NIOO-KNAW	SAMN03275729	GCA_001442805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/805/GCA_001442805.1_ASM144280v1	26597042	3.2.11
Pseudomonas aeruginosa	287	PRJEB9838	295166	Proteobacteria	Gammaproteobacteria	6.27647	66.5	chromosome I:NZ_LN871187.1/LN871187.1	-	1	5925	5797	9/8/15	3/20/17	Complete Genome	INSTITUT DE GENETIQUE ET MICROBIOLOGIE	SAMEA3485223	GCA_900070375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/070/375/GCA_900070375.1_PAO1OR	-	PAO1_Orsay
Mycoplasma columbinum ATCC 29257	1408457	PRJNA223100	223100	Terrabacteria group	Tenericutes	0.765157	26.9	-	JONY01	11	650	598	6/25/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02744819	GCA_000712175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/175/GCA_000712175.1_ASM71217v1	-	ATCC 29257
Haloplasma contractile SSD-17B	1033810	PRJNA66977	66977	unclassified Bacteria	Haloplasmatales	3.4045	32.3	-	AFNU02	34	2991	2914	6/7/11	4/17/17	Contig	King Abdullah University of Science and Technology (KAUS)	SAMN02472186	GCA_000215935.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/935/GCA_000215935.3_HLPCO_V2	"2,170,559,924,324,760"	SSD-17B
Salinisphaera shabanensis E1L3A	1033802	PRJNA66981	66981	Proteobacteria	Gammaproteobacteria	3.76033	61.6	-	AFNV02	41	3540	3411	6/7/11	4/17/17	Contig	King Abdullah University of Science and Technology (KAUS)	SAMN02472183	GCA_000215955.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/955/GCA_000215955.3_SSPSH_V2	"2,170,558,824,324,760"	E1L3A
[Propionibacterium] humerusii P08	999892	PRJNA64551	64551	Terrabacteria group	Actinobacteria	2.62329	59.9	-	AFAM01	22	2643	2464	4/14/11	4/6/17	Contig	"Bumgarner laboratory, Department of Microbiology, University of Washington"	SAMN02471992	GCA_000204235.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/235/GCA_000204235.2_ASM20423v2	21571999	P08
Mycoplasma anatis 1340	1034808	PRJNA67125	67125	Terrabacteria group	Tenericutes	0.928687	26.6	-	AFVJ01	44	814	752	7/25/11	4/17/17	Contig	Huazhong Agricultural Uni	SAMN02469901	GCA_000221305.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/305/GCA_000221305.2_ASM22130v1	21952548	1340
Pseudomonas aeruginosa	287	PRJNA289296	289296	Proteobacteria	Gammaproteobacteria	6.36801	66.5	chromosome:NZ_CP012066.1/CP012066.1	-	1	6006	5859	7/13/15	3/17/17	Complete Genome	China National Rice Research Institute	SAMN03852256	GCA_001077475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/475/GCA_001077475.1_ASM107747v1	-	F9676
Pseudomonas aeruginosa DSM 50071 = NBRC 12689	1123015	PRJNA285827	285827	Proteobacteria	Gammaproteobacteria	6.31705	66.5	chromosome:NZ_CP012001.1/CP012001.1	-	1	5980	5846	7/2/15	3/17/17	Complete Genome	Okinawa Institute of Advanced Sciences	SAMN03761153	GCA_001045685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/685/GCA_001045685.1_ASM104568v1	26294631	DSM 50071
Pseudomonas aeruginosa	287	PRJEB6403	251923	Proteobacteria	Gammaproteobacteria	6.31698	66.5	chromosome 1:NZ_LN831024.1/LN831024.1	-	1	5980	5761	3/22/15	3/19/17	Complete Genome	SC	SAMEA2479570	GCA_001457615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/615/GCA_001457615.1_NCTC10332	-	NCTC10332
Pseudomonas aeruginosa VRFPA04	1400868	PRJNA219238	219238	Proteobacteria	Gammaproteobacteria	6.81803	66.5	chromosome:NZ_CP008739.1/CP008739.2	-	1	6502	5949	6/27/14	3/16/17	Complete Genome	"VISION RESEARCH FOUNDATION, SANKARA NETHRALAYA."	SAMN02472098	GCA_000473745.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/745/GCA_000473745.3_ASM47374v3	27825482	VRFPA04
Thioalkalivibrio paradoxus ARh 1	713585	PRJNA52643	52643	Proteobacteria	Gammaproteobacteria	3.75673	66.5	chromosome:NZ_CP007029.1/CP007029.1	-	1	3562	3387	1/3/14	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02256529	GCA_000227685.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/685/GCA_000227685.3_ASM22768v3	-	ARh 1
Acetonema longum DSM 6540	1009370	PRJNA66109	66109	Terrabacteria group	Firmicutes	4.32301	50.4	-	AFGF01	296	4081	3847	6/22/11	5/18/17	Scaffold	California Institute of Technology	SAMN02469409	GCA_000219125.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/125/GCA_000219125.2_ASM21912v1	21673657	DSM 6540
Mesoflavibacter zeaxanthinifaciens DSM 18436	1122225	PRJNA188867	188867	FCB group	Bacteroidetes/Chlorobi group	2.96621	31.4	-	AULQ01	21	2721	2656	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441142	GCA_000422365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/365/GCA_000422365.1_ASM42236v1	-	DSM 18436
Marinobacterium stanieri	49186	PRJEB18844	360743	Proteobacteria	Gammaproteobacteria	4.68033	55.6	-	FTMN01	24	4378	4235	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421647	GCA_900155945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/945/GCA_900155945.1_IMG-taxon_2681813548_annotated_assembly	-	DSM 7027
Ochrovirga pacifica	1042376	PRJNA67841	67841	FCB group	Bacteroidetes/Chlorobi group	3.38463	33.9	-	AFPK01	77	2869	2780	7/12/11	4/17/17	Contig	Korea Ocean Research and Development Institute	SAMN02470154	GCA_000220525.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/525/GCA_000220525.2_ASM22052v2	21994933	S85
Helicobacter bizzozeronii CIII-1	1002804	PRJEA65019	65019	Proteobacteria	delta/epsilon subdivisions	1.80753	45.8905	chromosome:NC_015674.1/FR871757.1; plasmid phbz1:NC_015670.1/FR871758.1	-	2	1815	1602	6/8/11	4/7/17	Chromosome	"University of Helsinki, Faculty of Veterinary Medicine"	SAMEA2272649	GCA_000237285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/285/GCA_000237285.1_ASM23728v1	21705603	CIII-1
Candidatus Nitrosoarchaeum koreensis MY1	1001994	PRJNA67913	67913	TACK group	Thaumarchaeota	1.6077	32.7	-	AFPU01	1	1886	1828	7/7/11	4/7/17	Contig	Korea Research Institute of Bioscience and Biotechnology	SAMN02470178	GCA_000220175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/175/GCA_000220175.2_ASM22017v1	21914867	MY1
Serinicoccus marinus DSM 15273	1123251	PRJNA195809	195809	Terrabacteria group	Actinobacteria	3.3965	72.2	-	ATWM01	29	3256	3071	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441241	GCA_000421245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/245/GCA_000421245.1_ASM42124v1	-	DSM 15273
Pseudomonas aeruginosa RP73	1340851	PRJNA206088	206088	Proteobacteria	Gammaproteobacteria	6.34203	66.5	chromosome:NC_021577.1/CP006245.1	-	1	6014	5845	6/24/13	3/15/17	Complete Genome	"San Raffaele Scientific Institute, Division of Immunology, Transplantation and Infectious Diseases, Milano, Italy"	SAMN02603771	GCA_000414035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/035/GCA_000414035.1_ASM41403v1	23908295	RP73
Thioalkalivibrio nitratireducens DSM 14787	1255043	PRJNA178382	178382	Proteobacteria	Gammaproteobacteria	4.00235	66.5	chromosome:NC_019902.2/CP003989.2	-	1	3795	3532	12/17/12	4/16/17	Complete Genome	A.N. Bach Institute of Biochemistry	SAMN02602962	GCA_000321415.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/415/GCA_000321415.2_ASM32141v2	-	DSM 14787
Bizionia argentinensis JUB59	1046627	PRJNA68111	68111	FCB group	Bacteroidetes/Chlorobi group	3.27933	33.8	-	AFXZ01	70	3027	2929	8/23/11	4/17/17	Contig	Departamento de Quimica Biologica - Facultad de Ciencias Exactas y Naturales - Universidad de Buenos Aires	SAMN02469766	GCA_000224335.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/335/GCA_000224335.2_BizArg_1.0	18842857	JUB59
Pseudomonas aeruginosa M18	941193	PRJNA61423	61423	Proteobacteria	Gammaproteobacteria	6.32775	66.5	chromosome:NC_017548.1/CP002496.1	-	1	6001	5858	9/19/11	5/19/17	Complete Genome	"School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, PR China"	SAMN02603849	GCA_000226155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/155/GCA_000226155.1_ASM22615v1	21884571	M18
Pseudomonas sp. ADP	47660	PRJNA296545	296545	Proteobacteria	unclassified Proteobacteria	7.25939	66.836	plasmid pADP1:NZ_CM003636.1/CM003636.1	LKAX01	23	6482	6205	12/8/15	4/16/17	Scaffold	INRA	SAMN04099190	GCA_001465445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/465/445/GCA_001465445.1_ADP0v1	26868408	ADP
Variovorax paradoxus EPS	595537	PRJNA43457	43457	Proteobacteria	Betaproteobacteria	6.55006	66.5	chromosome:NC_014931.1/CP002417.1	-	1	6055	5917	12/29/10	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN00149467	GCA_000184745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/184/745/GCA_000184745.1_ASM18474v1	24158554	EPS
Delftia acidovorans SPH-1	398578	PRJNA17413	17413	Proteobacteria	Betaproteobacteria	6.76751	66.5	chromosome:NC_010002.1/CP000884.1	-	1	6232	6052	11/16/07	5/18/17	Complete Genome	US DOE Joint Genome Institute	SAMN00623041	GCA_000018665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/665/GCA_000018665.1_ASM1866v1	15240283	SPH-1
Pseudomonas citronellolis	53408	PRJNA323396	323396	Proteobacteria	Gammaproteobacteria	7.67976	66.4985	chromosome:NZ_CP015878.1/CP015878.1; plasmid pRBL16:NZ_CP015879.1/CP015879.1	-	2	6931	6703	6/2/16	4/12/17	Complete Genome	Shanghai JiaoTong University	SAMN05178539	GCA_001654435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/654/435/GCA_001654435.1_ASM165443v1	-	SJTE-3
Bordetella pseudohinzii	1331258	PRJNA318508	318508	Proteobacteria	Betaproteobacteria	4.55889	66.4828	chromosome:NZ_CP016440.1/CP016440.1; plasmid unnamed1:NZ_CP016441.1/CP016441.1	-	2	4266	4147	8/2/16	4/13/17	Complete Genome	University of Michigan	SAMN05366640	GCA_001698185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/185/GCA_001698185.1_ASM169818v1	-	HI4681
Sporolactobacillus inulinus CASD	1069536	PRJNA70783	70783	Terrabacteria group	Firmicutes	3.00953	45.1	-	AFVQ02	236	2855	2746	8/2/11	4/17/17	Contig	"The Institute of Microbiology, Chinese Academy of Sciences"	SAMN02471147	GCA_000222445.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/445/GCA_000222445.3_ASM22244v3	21952540	CASD
Burkholderia pyrrocinia	60550	PRJNA283474	283474	Proteobacteria	Betaproteobacteria	7.96135	66.4698	chromosome 1:NZ_CP011503.1/CP011503.1; chromosome 2:NZ_CP011504.1/CP011504.1; chromosome 3:NZ_CP011505.1/CP011505.1; plasmid p2327:NZ_CP011506.1/CP011506.1	-	4	7298	6929	6/12/15	4/10/17	Complete Genome	Kyungpook National University	SAMN03651233	GCA_001028665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/665/GCA_001028665.1_ASM102866v1	26150017	DSM 10685
SAR324 cluster bacterium JCVI-SC AAA005	1073573	PRJNA71321	71321	Proteobacteria	delta/epsilon subdivisions	4.25598	43.3	-	AGAU01	646	-	-	8/31/11	7/29/15	Contig	J. Craig Venter Institute	SAMN00699809	GCA_000224765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/765/GCA_000224765.2_sar324_mda	-	JCVI-SC AAA005
Burkholderia diffusa	488732	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.85783	66.4604	chromosome 1:NZ_CP013362.1/CP013362.1; chromosome 2:NZ_CP013363.1/CP013363.1; chromosome 3:NZ_CP013364.1/CP013364.1	-	3	6346	6059	9/2/16	4/5/17	Complete Genome	Northern Arizona University	SAMN03449129	GCA_001718315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/315/GCA_001718315.1_ASM171831v1	-	RF2-non-BP9
Saccharomonospora halophila 8	928729	PRJNA72359	72359	Terrabacteria group	Actinobacteria	3.68502	70.4	-	AICX01	116	3810	3141	4/25/13	4/17/17	Scaffold	Joint Genome Institute	SAMN02256397	GCA_000383775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/775/GCA_000383775.1_ASM38377v1	-	8
Halobacterium sp. DL1	751944	PRJNA59739	59739	Euryarchaeota	Halobacteria	3.16256	66.4422	chromosome:NZ_CP007060.1/CP007060.1; plasmid unnamed:NZ_CP007061.1/CP007061.1	-	2	3293	3180	1/13/14	4/17/17	Complete Genome	JGI	SAMN02261380	GCA_000230955.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/955/GCA_000230955.3_ASM23095v3	-	DL1
Deinococcus geothermalis DSM 11300	319795	PRJNA13423	13423	Terrabacteria group	Deinococcus-Thermus	3.24702	66.4409	chromosome:NC_008025.1/CP000359.1; plasmid pDGEO01:NC_008010.2/CP000358.2; plasmid pDGEO02:NC_009939.1/CP000856.1	-	3	3141	3003	5/4/06	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598303	GCA_000196275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/275/GCA_000196275.1_ASM19627v1	-	DSM 11300
Mycobacterium dioxanotrophicus	482462	PRJNA357161	357161	Terrabacteria group	Actinobacteria	8.08042	66.4321	chromosome:NZ_CP020809.1/CP020809.1; plasmid unnamed1:NZ_CP020810.1/CP020810.1; plasmid unnamed2:NZ_CP020811.1/CP020811.1; plasmid unnamed3:NZ_CP020812.1/CP020812.1; plasmid unnamed4:NZ_CP020813.1/CP020813.1	-	5	7811	7363	5/25/17	5/31/17	Complete Genome	Rice University	SAMN06134492	GCA_002157835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/835/GCA_002157835.1_ASM215783v1	-	PH-06
Gordonia alkanivorans CGMCC 6845	1423140	PRJNA227487	227487	Terrabacteria group	Actinobacteria	5.02513	67.5	-	AYXO01	61	4533	4325	12/4/13	4/9/17	Scaffold	Tianjin University	SAMN02641589	GCA_000503935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/935/GCA_000503935.1_Goralkv1.0	24482528	CGMCC 6845
Acetobacter tropicalis	104102	PRJDB3116	266935	Proteobacteria	Alphaproteobacteria	3.67573	55.6	-	BBMU01	453	3222	2949	11/11/14	4/11/17	Scaffold	National Institute of Advanced Industrial Science and Technology (AIST)	SAMD00019861	GCA_000787635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/635/GCA_000787635.2_ASM78763v2	25523780	NBRC 16470
Streptomyces zinciresistens K42	700597	PRJNA71331	71331	Terrabacteria group	Actinobacteria	8.22169	72.5	-	AGBF01	525	7569	6946	9/7/11	5/19/17	Contig	" College of Life Sciences, Northwest A & F University; Soil, Water and Environmental Science, University of Arizona"	SAMN02471576	GCA_000225525.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/525/GCA_000225525.2_ASM22552v1	-	K42
endosymbiont of Tevnia jerichonana (vent Tica)	1049564	PRJNA60887	60887	Proteobacteria	Gammaproteobacteria	3.6371	58.2	-	AFZB01	184	3318	3121	8/31/11	4/17/17	Contig	Georg-August-University Goettingen	SAMN02469821	GCA_000224925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/925/GCA_000224925.2_ASM22492v1	-	-
endosymbiont of Riftia pachyptila (vent Ph05)	1048808	PRJNA60889	60889	Proteobacteria	Gammaproteobacteria	3.48104	58.8	-	AFOC01	197	3307	2962	8/25/11	4/6/17	Contig	Georg-August-University Goettingen	SAMN02469822	GCA_000224455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/455/GCA_000224455.2_ASM22445v1	-	-
Brachybacterium squillarum M-6-3	1074488	PRJNA71501	71501	Terrabacteria group	Actinobacteria	3.19148	72.8	-	AGBX01	8	2906	2760	9/12/11	4/17/17	Contig	Kyung Hee University	SAMN02470219	GCA_000225825.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/825/GCA_000225825.2_ASM22582v2	-	M-6-3
Ralstonia solanacearum	305	PRJNA314571	314571	Proteobacteria	Betaproteobacteria	5.46326	66.4311	chromosome:NZ_CP014702.1/CP014702.1; plasmid unnamed:NZ_CP014703.1/CP014703.1	-	2	4897	4704	3/10/16	9/27/17	Complete Genome	Seoul National University	SAMN04538211	GCA_001586135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/135/GCA_001586135.1_ASM158613v1	-	KACC 10722
Burkholderia stabilis	95485	PRJNA328254	328254	Proteobacteria	Betaproteobacteria	8.52795	66.4094	chromosome 1:NZ_CP016442.1/CP016442.1; chromosome 2:NZ_CP016443.1/CP016443.1; chromosome 3:NZ_CP016444.1/CP016444.1	-	3	7946	7510	9/22/16	4/13/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05367054	GCA_001742165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/165/GCA_001742165.1_ASM174216v1	-	ATCC BAA-67
Pseudomonas aeruginosa	287	PRJNA310413	310413	Proteobacteria	Gammaproteobacteria	6.44524	66.4	chromosome:NZ_CP014866.1/CP014866.1	-	1	6105	5961	3/29/17	4/3/17	Complete Genome	HKU	SAMN04452263	GCA_002075065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/065/GCA_002075065.1_ASM207506v1	-	PA_154197
Pseudomonas aeruginosa	287	PRJNA299511	299511	Proteobacteria	Gammaproteobacteria	6.50466	66.4	chromosome:NZ_CP013113.1/CP013113.1	-	1	6137	5984	11/16/16	3/20/17	Complete Genome	Institute of Biochemistry and Biophysics of the Polish Academy of Sciences	SAMN04209275	GCA_001879525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/525/GCA_001879525.1_ASM187952v1	-	PAER4_119
Bacteroides faecis MAJ27	1077285	PRJNA72171	72171	FCB group	Bacteroidetes/Chlorobi group	6.11451	42.4	-	AGDG01	53	4869	4596	9/16/11	6/15/17	Contig	Kyung Hee University	SAMN02470209	GCA_000226135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/135/GCA_000226135.2_ASM22613v2	22072652	MAJ27
Pseudomonas aeruginosa	287	PRJNA265138	265138	Proteobacteria	Gammaproteobacteria	6.37073	66.4	chromosome:NZ_CP014948.1/CP014948.1	-	1	6038	5899	4/4/16	3/19/17	Complete Genome	"Institute of Agro-products Processing Science and Technology, Chinese Academy of Agricultural Sciences"	SAMN03145716	GCA_001606045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/045/GCA_001606045.1_ASM160604v1	-	N17-1
Thauera humireducens	1134435	PRJNA288381	288381	Proteobacteria	Betaproteobacteria	4.17175	66.4	chromosome:NZ_CP014646.1/CP014646.1	-	1	3916	3796	3/8/16	4/12/17	Complete Genome	Guangdong Institute of Eco-Environmental and Soil Science	SAMN03799235	GCA_001051995.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/995/GCA_001051995.2_ASM105199v2	-	SgZ-1
Pseudomonas aeruginosa	287	PRJNA253624	253624	Proteobacteria	Gammaproteobacteria	6.34876	66.4	chromosome:NZ_CP008872.2/CP008872.2	-	1	5953	5807	1/29/16	4/17/17	Complete Genome	MSKCC	SAMN02894342	GCA_001542795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/795/GCA_001542795.2_ASM154279v2	-	X78812
Pseudomonas aeruginosa	287	PRJNA281531	281531	Proteobacteria	Gammaproteobacteria	6.36458	66.4	chromosome:NZ_CP013989.1/CP013989.1	-	1	6012	5856	1/20/16	3/19/17	Complete Genome	USDA-ARS-USMARC	SAMN04158502	GCA_001518975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/975/GCA_001518975.1_ASM151897v1	-	USDA-ARS-USMARC-41639
Pseudomonas aeruginosa	287	PRJNA302926	302926	Proteobacteria	Gammaproteobacteria	6.40042	66.4	chromosome:NZ_CP013245.1/CP013245.1	-	1	6019	5850	11/24/15	3/18/17	Complete Genome	The Forsyth Institute	SAMN04284690	GCA_001447845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/447/845/GCA_001447845.1_ASM144784v1	26823594	VA-134
Stenotrophomonas maltophilia	40324	PRJNA277366	277366	Proteobacteria	Gammaproteobacteria	4.50972	66.4	chromosome:NZ_CP011305.1/CP011305.1	-	1	4076	3964	8/26/15	8/29/15	Complete Genome	Icahn School of Medicine at Mount Sinai	SAMN03389647	GCA_001274655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/274/655/GCA_001274655.1_ASM127465v1	26324280	ISMMS2
Selenomonas ruminantium AB3002	1392502	PRJNA217197	217197	Terrabacteria group	Firmicutes	3.66589	52	-	JNIO01	8	3486	3316	6/11/14	4/2/17	Contig	DOE Joint Genome Institute	SAMN02841170	GCA_000702545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/545/GCA_000702545.1_ASM70254v1	-	AB3002
Stenotrophomonas maltophilia	40324	PRJNA277366	277366	Proteobacteria	Gammaproteobacteria	4.50972	66.4	chromosome:NZ_CP011306.1/CP011306.1	-	1	4076	3964	8/26/15	8/29/15	Complete Genome	Icahn School of Medicine at Mount Sinai	SAMN03389649	GCA_001274675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/274/675/GCA_001274675.1_ASM127467v1	26324280	ISMMS2R
Mycobacterium sp. EPa45	1545728	PRJNA285733	285733	Terrabacteria group	Actinobacteria	6.17741	66.4	chromosome:NZ_CP011773.1/CP011773.1	-	1	5890	5737	6/8/15	4/10/17	Complete Genome	Tohoku University	SAMN03758429	GCA_001021385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/385/GCA_001021385.1_ASM102138v1	26184940	EPa45
Pseudomonas aeruginosa YL84	1448140	PRJNA234476	234476	Proteobacteria	Gammaproteobacteria	6.43344	66.4	chromosome:NZ_CP007147.1/CP007147.1	-	1	6078	5902	1/30/14	3/16/17	Complete Genome	UNIVERSITY OF MALAYA	SAMN02641599	GCA_000524595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/595/GCA_000524595.1_ASM52459v1	24699957	YL84
Pseudomonas aeruginosa PA1	1279007	PRJNA185335	185335	Proteobacteria	Gammaproteobacteria	6.49807	66.4	chromosome:NC_022808.2/CP004054.2	-	1	6183	6026	11/12/13	3/18/17	Complete Genome	"Department of Microbiology, The Third Military Medical University"	SAMN02603191	GCA_000496605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/605/GCA_000496605.2_ASM49660v2	26659688	PA1
Pseudomonas aeruginosa B136-33	1280938	PRJNA185969	185969	Proteobacteria	Gammaproteobacteria	6.42101	66.4	chromosome:NC_020912.1/CP004061.1	-	1	6062	5914	4/9/13	5/19/17	Complete Genome	National Tsing Hua University	SAMN02603669	GCA_000359505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/505/GCA_000359505.1_ASM35950v1	-	B136-33
Pseudomonas aeruginosa PA7	381754	PRJNA16720	16720	Proteobacteria	Gammaproteobacteria	6.58834	66.4	chromosome:NC_009656.1/CP000744.1	-	1	6263	6010	7/5/07	5/19/17	Complete Genome	J. Craig Venter Institute	SAMN02603435	GCA_000017205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/205/GCA_000017205.1_ASM1720v1	20107499	PA7
Burkholderia contaminans	488447	PRJNA263944	263944	Proteobacteria	Betaproteobacteria	8.50925	66.3954	chromosome 1:NZ_CP009743.1/CP009743.1; chromosome 2:NZ_CP009744.1/CP009744.1; chromosome 3:NZ_CP009745.1/CP009745.1	-	3	7855	7501	6/17/15	4/6/17	Complete Genome	Mississippi state university	SAMN03135394	GCA_001029145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/145/GCA_001029145.1_ASM102914v1	26769582	MS14
Rhizobium rhizogenes NBRC 13257	1220581	PRJDB400	172599	Proteobacteria	Alphaproteobacteria	7.04447	59.9	-	BAYX01	53	6654	6476	5/17/14	4/2/17	Contig	National Institute of Technology and Evaluation	SAMD00016801	GCA_000696095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/095/GCA_000696095.1_ASM69609v1	-	NBRC 13257
Burkholderia latens	488446	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.61448	66.3874	chromosome 1:NZ_CP013435.1/CP013435.1; chromosome 2:NZ_CP013438.1/CP013438.1; chromosome 3:NZ_CP013437.1/CP013437.1; plasmid pAU17928:NZ_CP013436.1/CP013436.1	-	4	6145	5820	9/2/16	4/13/17	Complete Genome	Northern Arizona University	SAMN03449404	GCA_001718795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/795/GCA_001718795.1_ASM171879v1	-	AU17928
Burkholderia ambifaria MC40-6	398577	PRJNA17411	17411	Proteobacteria	Betaproteobacteria	7.64254	66.3825	chromosome 1:NC_010551.1/CP001025.1; chromosome 2:NC_010552.1/CP001026.1; chromosome 3:NC_010557.1/CP001027.1; plasmid pBMC401:NC_010553.1/CP001028.1	-	4	6739	6575	4/3/08	5/13/16	Complete Genome	US DOE Joint Genome Institute	SAMN02598385	GCA_000019925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/925/GCA_000019925.1_ASM1992v1	-	MC40-6
Arthrobacter sp. U41	1849032	PRJNA320863	320863	Terrabacteria group	Actinobacteria	4.79263	66.3816	chromosome:NZ_CP015732.1/CP015732.1; plasmid unnamed1:NZ_CP015733.1/CP015733.1; plasmid unnamed2:NZ_CP015734.1/CP015734.1; plasmid unnamed3:NZ_CP015735.1/CP015735.1	-	4	4407	4134	9/30/16	4/13/17	Complete Genome	New England Biolabs	SAMN04958683	GCA_001750145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/145/GCA_001750145.1_ASM175014v1	-	U41
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.00363	66.3698	chromosome 3:NZ_CP013442.1/CP013442.1; chromosome 1:NZ_CP013443.1/CP013443.1; chromosome 2:NZ_CP013444.1/CP013444.1	-	3	7269	6805	9/2/16	4/5/17	Complete Genome	Northern Arizona University	SAMN03449447	GCA_001718835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/835/GCA_001718835.1_ASM171883v1	-	MSMB1184WGS
Holophaga foetida DSM 6591	903818	PRJNA53485	53485	Acidobacteria	Holophagae	4.12724	62.9	-	AGSB02	3	3604	3495	1/12/12	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02256516	GCA_000242615.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/615/GCA_000242615.3_ASM24261v3	22768361	DSM 6591
Ralstonia eutropha H16	381666	PRJNA13603	13603	Proteobacteria	Betaproteobacteria	7.41668	66.3618	chromosome 1:NC_008313.1/AM260479.1; chromosome 2:NC_008314.1/AM260480.1; plasmid megaplasmid pHG1:NC_005241.1/AY305378.1	-	3	6831	6527	8/30/06	4/10/17	Complete Genome	Gottingen Genomics Laboratory	SAMEA3283071	GCA_000009285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/285/GCA_000009285.2_ASM928v2	16964242	H16
Gluconacetobacter diazotrophicus PA1 5	272568	PRJNA21071	21071	Proteobacteria	Alphaproteobacteria	3.91495	66.3446	chromosome:NC_011365.1/CP001189.1; plasmid pGDIA01:NC_011367.1/CP001190.1	-	2	3647	3457	10/16/08	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598444	GCA_000021325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/325/GCA_000021325.1_ASM2132v1	21304715	PAl 5; ATCC 49037
Stenotrophomonas maltophilia	40324	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.85114	66.3	chromosome:NZ_CP022053.1/CP022053.1	-	1	4513	4226	6/27/17	6/29/17	Complete Genome	US Food and Drug Administration 	SAMN06173338	GCA_002208885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/885/GCA_002208885.1_ASM220888v1	-	FDAARGOS_325
Stenotrophomonas maltophilia	40324	PRJNA321363	321363	Proteobacteria	Gammaproteobacteria	4.66874	66.3	chromosome:NZ_CP015612.1/CP015612.1	-	1	4279	4150	5/15/17	6/15/17	Complete Genome	Ocean University of China	SAMN04992827	GCA_002138415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/415/GCA_002138415.1_ASM213841v1	-	OUC_Est10
Dietzia alimentaria 72	1077144	PRJNA72173	72173	Terrabacteria group	Actinobacteria	3.35282	67.3	-	AGFF01	39	3161	3051	9/20/11	4/7/17	Contig	Kyung Hee University	SAMN02470218	GCA_000226215.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/215/GCA_000226215.2_ASM22621v2	22072646	72
Pseudomonas aeruginosa PAK	1009714	PRJNA232360	232360	Proteobacteria	Gammaproteobacteria	6.28332	66.3	chromosome:NZ_CP020659.1/CP020659.1	-	1	6008	5500	4/13/17	9/18/17	Complete Genome	University of Texas at Austin	SAMN02483603	GCA_000568855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/855/GCA_000568855.2_ASM56885v2	-	PAK
Delftia tsuruhatensis	180282	PRJNA344535	344535	Proteobacteria	Betaproteobacteria	7.19572	66.3	chromosome:NZ_CP017420.1/CP017420.1	-	1	6692	6421	10/6/16	4/13/17	Complete Genome	Institut Pasteur de Paris	SAMN05828192	GCA_001753225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/225/GCA_001753225.1_ASM175322v1	-	CM13
Pseudomonas aeruginosa	287	PRJEB14496	327329	Proteobacteria	Gammaproteobacteria	6.54148	66.3	chromosome PA14OR:NZ_LT608330.1/LT608330.1	-	1	6181	6038	9/7/16	3/20/17	Complete Genome	INSTITUT DE GENETIQUE ET MICROBIOLOGIE	SAMEA4393802	GCA_900095805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/805/GCA_900095805.1_PA14Or	-	-
Pseudomonas aeruginosa	287	PRJNA253624	253624	Proteobacteria	Gammaproteobacteria	6.45687	66.3	chromosome:NZ_CP008868.1/CP008868.1	-	1	6129	5925	1/15/16	4/2/17	Complete Genome	MSKCC	SAMN02894347	GCA_001516105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/105/GCA_001516105.1_ASM151610v1	-	T63266
Pseudomonas aeruginosa	287	PRJNA253624	253624	Proteobacteria	Gammaproteobacteria	6.56823	66.3	chromosome:NZ_CP008860.2/CP008860.2	-	1	6179	5982	1/15/16	4/17/17	Complete Genome	MSKCC	SAMN02894354	GCA_001516325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/325/GCA_001516325.2_ASM151632v2	-	H27930
Sphingobium chungbukense	56193	PRJNA281976	281976	Proteobacteria	Alphaproteobacteria	5.51649	63.3	-	LBIC01	40	5331	5065	5/8/15	4/17/17	Contig	Chonbuk National University	SAMN03516208	GCA_001005725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/725/GCA_001005725.1_ASM100572v1	-	DJ77
Pseudomonas aeruginosa	287	PRJNA253624	253624	Proteobacteria	Gammaproteobacteria	6.61877	66.3	chromosome:NZ_CP008858.2/CP008858.2	-	1	6353	6186	1/15/16	4/26/17	Complete Genome	MSKCC	SAMN02894356	GCA_001594325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/325/GCA_001594325.2_ASM159432v2	-	F63912
Pseudomonas aeruginosa	287	PRJNA306518	306518	Proteobacteria	Gammaproteobacteria	6.43191	66.3	chromosome:NZ_CP013696.1/CP013696.1	-	1	6113	5949	12/24/15	3/19/17	Complete Genome	The Forsyth Institute	SAMN04351367	GCA_001482325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/325/GCA_001482325.1_ASM148232v1	26941150	12-4-4(59)
Treponema saccharophilum DSM 2985	907348	PRJNA53931	53931	Spirochaetes	Spirochaetia	3.4539	53.2	-	AGRW01	56	2960	2837	3/21/12	4/7/17	Contig	JGI	SAMN02261376	GCA_000255555.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/555/GCA_000255555.2_ASM25555v2	-	DSM 2985
Pseudomonas aeruginosa	287	PRJNA295473	295473	Proteobacteria	Gammaproteobacteria	6.50044	66.3	chromosome:NZ_CP012679.1/CP012679.1	-	1	6189	6030	9/17/15	3/18/17	Complete Genome	Third Military Medical University	SAMN04074798	GCA_001293085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/085/GCA_001293085.1_ASM129308v1	26893434	PA1RG
Afipia felis ATCC 53690	883080	PRJNA52159	52159	Proteobacteria	Alphaproteobacteria	4.20329	60.7	-	AGWZ01	11	4064	3955	11/6/12	5/18/17	Scaffold	Broad Institute	SAMN02463900	GCA_000314735.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/735/GCA_000314735.2_Afip_feli_felis_ATCC_53690_V1	-	ATCC 53690
Burkholderiales bacterium GJ-E10	1469502	PRJDB1653	267782	Proteobacteria	Betaproteobacteria	3.27655	66.3	chromosome:NZ_AP014683.1/AP014683.1	-	1	3103	2988	11/15/14	4/10/17	Complete Genome	Akita Prefectural University	SAMD00020950	GCA_000828975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/975/GCA_000828975.1_ASM82897v1	25657271	GJ-E10
Alloiococcus otitis ATCC 51267	883081	PRJNA52161	52161	Terrabacteria group	Firmicutes	1.8066	44.6	-	AGXA01	8	1674	1569	11/27/12	4/17/17	Scaffold	Broad Institute	SAMN02463901	GCA_000315445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/445/GCA_000315445.1_Allo_otit_ATCC_51267_V1	-	ATCC 51267
Acidithiobacillus thiooxidans ATCC 19377	637390	PRJNA36587	36587	Proteobacteria	Acidithiobacillia	3.01987	53.2	-	AFOH01	164	3106	2847	10/3/11	3/30/17	Contig	Center for Bioinformatics and Genome Biology	SAMN02469801	GCA_000227215.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/215/GCA_000227215.2_ASM22721v2	22123759	ATCC 19377
Sphingomonas elodea ATCC 31461	1081640	PRJNA72839	72839	Proteobacteria	Alphaproteobacteria	4.12439	67.4	-	AGFU01	127	3850	3638	9/30/11	5/19/17	Contig	Shanghai Jiao Tong University	SAMN02470957	GCA_000226955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/955/GCA_000226955.2_ASM22695v2	22123766	ATCC 31461
Pseudomonas aeruginosa SCV20265	1427342	PRJNA229445	229445	Proteobacteria	Gammaproteobacteria	6.72518	66.3	chromosome:NC_023149.1/CP006931.1	-	1	6435	6258	12/18/13	3/15/17	Complete Genome	Helmholtz Center for Infection Research	SAMN02415141	GCA_000510305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/510/305/GCA_000510305.1_ASM51030v1	24459283	SCV20265
Neisseria shayeganii 871	1032488	PRJNA66915	66915	Proteobacteria	Betaproteobacteria	2.35455	57.6	-	AGAY01	26	2385	2166	9/29/11	4/17/17	Scaffold	Baylor College of Medicine	SAMN02299457	GCA_000226875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/875/GCA_000226875.1_ASM22687v1	-	871
Streptomyces lysosuperificus ATCC 31396	1079984	PRJNA72669	72669	Terrabacteria group	Actinobacteria	8.90964	70.2	-	AGDC01	2358	-	-	9/26/11	1/8/14	Scaffold	"US Dept of Agriculture, NCAUR-USDA"	SAMN02471827	GCA_000226415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/415/GCA_000226415.1_ASM22641v1	22123769	ATCC 31396
Streptomyces chartreusis NRRL 12338	1079986	PRJNA72673	72673	Terrabacteria group	Actinobacteria	8.89369	71.2	-	AGDE01	89	8072	7561	9/26/11	5/19/17	Scaffold	"US Dept of Agriculture, NCAUR-USDA"	SAMN02471828	GCA_000226455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/455/GCA_000226455.1_ASM22645v1	22123769	NRRL 12338
Pseudomonas aeruginosa LES431	1408272	PRJNA222518	222518	Proteobacteria	Gammaproteobacteria	6.55007	66.3	chromosome:NC_023066.1/CP006937.1	-	1	6227	6053	12/17/13	3/15/17	Complete Genome	"IBIS, University Laval"	SAMN02641592	GCA_000508765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/765/GCA_000508765.1_ASM50876v1	-	LES431
Streptococcus sobrinus DSM 20742 = ATCC 33478	1123317	PRJNA234798	234798	Terrabacteria group	Firmicutes	2.13849	43.4	-	JMLC01	54	2118	1926	5/8/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02743354	GCA_000686605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/605/GCA_000686605.1_ASM68660v1	-	DSM 20742
Peptoniphilus indolicus ATCC 29427	997350	PRJNA64733	64733	Terrabacteria group	Firmicutes	2.23786	32.7	-	AGBB01	98	2122	1894	10/3/11	4/17/17	Scaffold	Baylor College of Medicine	SAMN02299448	GCA_000227315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/315/GCA_000227315.1_ASM22731v1	-	ATCC 29427
Pseudomonas aeruginosa PA1R	1279008	PRJNA185336	185336	Proteobacteria	Gammaproteobacteria	6.30931	66.3	chromosome:NC_022806.1/CP004055.1	-	1	6019	5858	11/12/13	3/15/17	Complete Genome	"Department of Microbiology, The Third Military Medical University"	SAMN02603192	GCA_000496645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/645/GCA_000496645.1_ASM49664v1	-	PA1R
Pseudomonas aeruginosa DK2	1093787	PRJNA73815	73815	Proteobacteria	Gammaproteobacteria	6.40266	66.3	chromosome:NC_018080.1/CP003149.1	-	1	6098	5910	6/20/12	5/19/17	Complete Genome	Technical University of Denmark	SAMN02603895	GCA_000271365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/365/GCA_000271365.1_ASM27136v1	22672046	DK2
Pseudomonas aeruginosa LESB58	557722	PRJEA31101	31101	Proteobacteria	Gammaproteobacteria	6.60176	66.3	chromosome:NC_011770.1/FM209186.1	-	1	6298	6135	12/24/08	5/19/17	Complete Genome	Wellcome Trust Sanger Institute	SAMEA1705916	GCA_000026645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/645/GCA_000026645.1_ASM2664v1	19047519	LESB58
Thioalkalivibrio thiocyanoxidans ARh2	1279019	PRJNA185302	185302	Proteobacteria	Gammaproteobacteria	2.76534	66.2	-	ARQK01	61	2716	2581	4/26/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441309	GCA_000385215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/215/GCA_000385215.1_ASM38521v1	-	ARh2
Stenotrophomonas maltophilia R551-3	391008	PRJNA17107	17107	Proteobacteria	Gammaproteobacteria	4.57397	66.3	chromosome:NC_011071.1/CP001111.1	-	1	4148	4035	7/21/08	6/15/17	Complete Genome	US DOE Joint Genome Institute	SAMN00623065	GCA_000020665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/665/GCA_000020665.1_ASM2066v1	-	R551-3
Thiorhodospira sibirica ATCC 700588	765914	PRJNA61387	61387	Proteobacteria	Gammaproteobacteria	3.18887	56.7	-	AGFD01	186	2904	2613	10/6/11	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441807	GCA_000227725.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/725/GCA_000227725.2_ASM22772v1	-	ATCC 700588
Neisseria wadsworthii 9715	1030841	PRJNA66911	66911	Proteobacteria	Betaproteobacteria	2.46707	48.6	-	AGAZ01	16	2300	2192	10/6/11	4/17/17	Scaffold	Baylor College of Medicine	SAMN02299456	GCA_000227765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/765/GCA_000227765.1_ASM22776v1	-	9715
Komagataeibacter oboediens 174Bp2	940286	PRJEA61333	61333	Proteobacteria	Alphaproteobacteria	4.18147	61.3	-	CADT01	200	4066	3640	2/21/11	5/18/17	Scaffold	Vital-IT - Swiss Institute of Bioinformatics	SAMEA2272725	GCA_000227565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/565/GCA_000227565.1_ASM22756v1	-	174Bp2
Candidatus Glomeribacter gigasporarum	132144	PRJNA276133	276133	Proteobacteria	Betaproteobacteria	2.35585	49.7	-	LXRJ01	851	2339	2013	7/12/16	4/13/17	Contig	Cornell University	SAMN04957525	GCA_001684025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/684/025/GCA_001684025.1_ASM168402v1	27189571	BEG1
Mycoplasma iowae 695	1048830	PRJNA68271	68271	Terrabacteria group	Tenericutes	1.19515	24.5	-	AGFP01	70	977	906	10/4/11	4/7/17	Contig	Huazhong Agricultural University	SAMN02469898	GCA_000227355.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/355/GCA_000227355.2_ASM22735v1	22207750	695
Stenotrophomonas maltophilia K279a	522373	PRJNA30351	30351	Proteobacteria	Gammaproteobacteria	4.85113	66.3	chromosome:NC_010943.1/AM743169.1	-	1	4522	4368	4/25/08	6/15/17	Complete Genome	Wellcome Trust Sanger Institute	SAMEA1705934	GCA_000072485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/072/485/GCA_000072485.1_ASM7248v1	18419807	K279a
Dickeya chrysanthemi NCPPB 516	1223571	PRJNA172904	172904	Proteobacteria	Gammaproteobacteria	4.61724	54.2413	chromosome:NZ_CM001904.1/CM001904.1	AOOC01	8	4244	4012	6/4/13	4/8/17	Chromosome	James Hutton Institute	SAMN02470085	GCA_000406065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/065/GCA_000406065.1_DCH516_1.0	24265502	NCPPB 516
Pseudomonas aeruginosa UCBPP-PA14	208963	PRJNA386	386	Proteobacteria	Gammaproteobacteria	6.53765	66.3	chromosome:NC_008463.1/CP000438.1	-	1	6177	6021	10/6/06	5/19/17	Complete Genome	Massachusetts General Hospital	SAMN02603591	GCA_000014625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/625/GCA_000014625.1_ASM1462v1	17038190	UCBPP-PA14
Gluconacetobacter diazotrophicus PA1 5	272568	PRJNA377	377	Proteobacteria	Alphaproteobacteria	3.99959	66.2969	chromosome:NC_010125.1/AM889285.1; plasmid pGDIPal5I:NC_010124.1/AM889287.1; plasmid pGDIPal5II:NC_010123.1/AM889286.1	-	3	3771	3486	12/5/07	4/7/17	Complete Genome	FAPERJ - RioGene	SAMEA3138270	GCA_000067045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/067/045/GCA_000067045.1_ASM6704v1	19775431	PAl 5
Ralstonia solanacearum PSI07	859657	PRJEA50683	50683	Proteobacteria	Betaproteobacteria	5.60562	66.2884	chromosome:NC_014311.1/FP885906.2; plasmid mpPSI07:NC_014310.1/FP885891.2	-	2	4972	4749	6/22/10	5/19/17	Complete Genome	CEA-Genoscope	SAMEA2272112	GCA_000283475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/475/GCA_000283475.1_ASM28347v1	20550686	PSI07
Burkholderia lata	482957	PRJNA10695	10695	Proteobacteria	Betaproteobacteria	8.67628	66.262	chromosome 1:NC_007510.1/CP000151.1; chromosome 2:NC_007511.1/CP000152.1; chromosome 3:NC_007509.1/CP000150.1	-	3	7991	7678	10/20/05	8/28/17	Complete Genome	DOE Joint Genome Institute	SAMN02598262	GCA_000012945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/945/GCA_000012945.1_ASM1294v1	-	383
Chrysiogenes arsenatis DSM 11915	118005	PRJNA217687	217687	Chrysiogenetes	Chrysiogenetes	2.82516	50	-	AWNK01	22	2608	2476	9/20/13	4/17/17	Scaffold	UC Davis Genome Center	SAMN02471296	GCA_000469585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/585/GCA_000469585.1_Chrysiogenes_arsenatis	24233593	DSM 11915
Paludisphaera borealis	1387353	PRJNA354242	354242	PVC group	Planctomycetes	7.6519	66.2465	chromosome:NZ_CP019082.1/CP019082.1; plasmid PALBO1:NZ_CP019083.1/CP019083.1; plasmid PALBO2:NZ_CP019084.1/CP019084.1	-	3	5944	5715	1/19/17	4/17/17	Complete Genome	Research Center of Biotechnology of RAS	SAMN06044225	GCA_001956985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/985/GCA_001956985.1_ASM195698v1	28360896	PX4
Haloferax gibbonsii	35746	PRJNA285662	285662	Euryarchaeota	Halobacteria	3.91845	66.2381	chromosome:NZ_CP011947.1/CP011947.1; plasmid pHG1:NZ_CP011948.1/CP011948.1; plasmid pHG2:NZ_CP011949.1/CP011949.1; plasmid pHG3:NZ_CP011950.1/CP011950.1; plasmid pHG4:NZ_CP011951.1/CP011951.1	-	5	3837	3744	8/3/15	4/10/17	Complete Genome	Universidade do Estado do Rio de Janeiro	SAMN03755233	GCA_001190965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/190/965/GCA_001190965.1_ASM119096v1	-	ARA6
Pseudomonas aeruginosa	287	PRJNA389181	389181	Proteobacteria	Gammaproteobacteria	6.56672	66.2	chromosome:NZ_CP021999.1/CP021999.1	-	1	6284	6058	6/22/17	8/21/17	Complete Genome	"Facultad de Medicina, Universidad Nacional Autonoma de Mexico"	SAMN05020322	GCA_002205335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/335/GCA_002205335.1_ASM220533v1	-	Pa84
Bordetella genomosp. 8	1416806	PRJNA385118	385118	Proteobacteria	Betaproteobacteria	6.16754	66.2	chromosome:NZ_CP021108.1/CP021108.1	-	1	5597	5420	5/9/17	5/22/17	Complete Genome	University of Michigan	SAMN06767142	GCA_002119685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/685/GCA_002119685.1_ASM211968v1	-	AU19157
Anaerobranca gottschalkii DSM 13577	1120990	PRJEB17040	351190	Terrabacteria group	Firmicutes	2.30017	32.9	-	FOIF01	110	2368	2191	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03080614	GCA_900111575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/575/GCA_900111575.1_IMG-taxon_2602042032_annotated_assembly	-	DSM 13577
Atopobium minutum	1381	PRJNA222257	222257	Terrabacteria group	Actinobacteria	1.71982	48.7	-	JQBO01	46	1601	1501	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02797803	GCA_001437015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/015/GCA_001437015.1_ASM143701v1	26415554	DSM 20586
Sphingomonas sp. LM7	1938607	PRJNA363095	363095	Proteobacteria	Alphaproteobacteria	4.15551	66.2	chromosome:NZ_CP019511.1/CP019511.1	-	1	3883	3764	2/17/17	4/17/17	Complete Genome	The University of Chicago	SAMN06263770	GCA_002002925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/925/GCA_002002925.1_ASM200292v1	-	LM7
Halobaculum gomorrense	43928	PRJEB18229	355493	Euryarchaeota	Halobacteria	3.20825	68.6	-	FQWV01	16	3166	3026	12/2/16	3/22/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05443636	GCA_900129775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/775/GCA_900129775.1_IMG-taxon_2695420988_annotated_assembly	-	DSM 9297
Geothrix fermentans DSM 14018	1121920	PRJNA185357	185357	Acidobacteria	Holophagae	3.28981	68.9	-	AUAU01	36	2980	2853	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441206	GCA_000428885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/885/GCA_000428885.1_ASM42888v1	-	DSM 14018
Natrialba asiatica DSM 12278	29540	PRJNA174930	174930	Euryarchaeota	Halobacteria	4.40418	62.4	-	AOIO01	49	4237	3996	2/4/13	5/19/17	Contig	"University of California, Davis"	SAMN02471653	GCA_000337555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/555/GCA_000337555.1_ASM33755v1	25393412	DSM 12278
Mycoplasma orale ATCC 23714	1266996	PRJNA183029	183029	Terrabacteria group	Tenericutes	0.710549	25.4	-	ATUH01	21	639	559	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441597	GCA_000420105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/105/GCA_000420105.1_ASM42010v1	-	ATCC 23714
Pseudomonas aeruginosa	287	PRJNA352277	352277	Proteobacteria	Gammaproteobacteria	6.72338	66.2	chromosome:NZ_CP017969.1/CP017969.1	-	1	6438	6216	11/10/16	3/20/17	Complete Genome	University of Hawaii	SAMN05969160	GCA_001874465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/465/GCA_001874465.1_ASM187446v1	-	-
Pseudomonas aeruginosa	287	PRJNA341834	341834	Proteobacteria	Gammaproteobacteria	6.86679	66.2	chromosome:NZ_CP017353.1/CP017353.1	-	1	6598	6209	10/3/16	3/20/17	Complete Genome	Shanghai Jiao Tong University	SAMN05729608	GCA_001750705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/705/GCA_001750705.1_ASM175070v1	-	FA-HZ1
Pseudomonas aeruginosa	287	PRJNA294254	294254	Proteobacteria	Gammaproteobacteria	6.64382	66.2	chromosome:NZ_CP012585.1/CP012585.1	-	1	6285	6120	9/8/16	3/21/17	Complete Genome	Nanyang Technological University	SAMN04910034	GCA_001721745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/745/GCA_001721745.1_ASM172174v1	-	PA_D1
Methanothermococcus thermolithotrophicus DSM 2095	523845	PRJNA182394	182394	Euryarchaeota	Methanococci	1.68693	32.8	-	AQXV01	55	1715	1624	4/22/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440415	GCA_000376965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/965/GCA_000376965.1_ASM37696v1	-	DSM 2095
Streptomyces peucetius	1950	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.52866	71.9	-	JOCK01	125	8249	7890	7/15/14	3/11/17	Scaffold	University of Illinois	SAMN02645417	GCA_000725565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/565/GCA_000725565.1_Doro.v1.0	-	NRRL WC-3868
Pseudomonas aeruginosa	287	PRJNA294254	294254	Proteobacteria	Gammaproteobacteria	6.643	66.2	chromosome:NZ_CP012578.1/CP012578.1	-	1	6283	6120	9/8/16	3/21/17	Complete Genome	Nanyang Technological University	SAMN04910045	GCA_001721765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/765/GCA_001721765.1_ASM172176v1	-	PA_D2
Trichodesmium thiebautii H9-4	1045877	PRJNA278659	278659	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.28656	35.3	-	LAMW01	201	-	-	5/1/15	5/1/15	Contig	University of Southern California	SAMN03421272	GCA_000987385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/987/385/GCA_000987385.1_H9-4	25831533	-
Pseudomonas aeruginosa	287	PRJNA294254	294254	Proteobacteria	Gammaproteobacteria	6.64548	66.2	chromosome:NZ_CP012580.1/CP012580.1	-	1	6290	6119	9/8/16	3/21/17	Complete Genome	Nanyang Technological University	SAMN04910066	GCA_001721785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/785/GCA_001721785.1_ASM172178v1	-	PA_D9
Pseudomonas aeruginosa	287	PRJNA294254	294254	Proteobacteria	Gammaproteobacteria	6.68198	66.2	chromosome:NZ_CP012581.1/CP012581.1	-	1	6326	6150	9/8/16	3/21/17	Complete Genome	Nanyang Technological University	SAMN04914381	GCA_001721805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/805/GCA_001721805.1_ASM172180v1	-	PA_D16
Bacillus lentus NBRC 16444	1348624	PRJDB1312	231369	Terrabacteria group	Firmicutes	4.33489	36.5	-	BCVC01	21	4095	3988	2/27/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046999	GCA_001591545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/545/GCA_001591545.1_ASM159154v1	-	NBRC 16444
Pseudomonas aeruginosa	287	PRJNA294254	294254	Proteobacteria	Gammaproteobacteria	6.68198	66.2	chromosome:NZ_CP012583.1/CP012583.1	-	1	6327	6146	9/8/16	3/21/17	Complete Genome	Nanyang Technological University	SAMN04914475	GCA_001721825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/825/GCA_001721825.1_ASM172182v1	-	PA_D22
Prochloron didemni P2-Fiji	910454	PRJNA82333	82333	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.51931	41.5	-	AFSJ01	3261	-	-	12/29/11	8/12/14	Scaffold	Institute for Genome Sciences	SAMN02954250	GCA_000252425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/425/GCA_000252425.1_ASM25242v1	22123943	-
Pseudomonas aeruginosa	287	PRJNA294254	294254	Proteobacteria	Gammaproteobacteria	6.6832	66.2	chromosome:NZ_CP012584.1/CP012584.1	-	1	6329	6143	9/8/16	3/21/17	Complete Genome	Nanyang Technological University	SAMN04914479	GCA_001721845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/845/GCA_001721845.1_ASM172184v1	-	PA_D25
Streptococcus canis FSL Z3-227	482234	PRJNA21075	21075	Terrabacteria group	Firmicutes	2.26786	39.7	-	AIDX01	1	2259	2025	6/15/12	5/19/17	Contig	Cornell University	SAMN02428975	GCA_000268305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/305/GCA_000268305.2_ASM26830v2	22666370	FSL Z3-227
Bacillus alcalophilus ATCC 27647 = CGMCC 1.3604	1218173	PRJNA171835	171835	Terrabacteria group	Firmicutes	4.37029	37.4	-	ALPT02	182	4231	3962	8/20/12	4/9/17	Contig	Mount Sinai School of Medicine	SAMN02470564	GCA_000292245.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/245/GCA_000292245.2_ASM29224v2	25395643	AV1934
Nitrospina gracilis 3/211	1266370	PRJEB1269	189458	Nitrospinae/Tectomicrobia group	Nitrospinae	3.07771	56.1	-	CAQJ01	4	2977	2796	2/13/13	4/17/17	Scaffold	Univie	SAMEA2272521	GCA_000341545.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/545/GCA_000341545.2_ASM34154v2	23439773	3/211
Candidatus Kuenenia stuttgartiensis enrichment culture clone CH1	1230344	PRJNA167262	167262	PVC group	Planctomycetes	3.81026	40.7	-	AMCF01	1311	-	-	11/26/12	8/11/14	Contig	Radboud University Nijmegen	SAMN02981447	GCA_000315095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/095/GCA_000315095.1_KustCH1	-	-
Wolbachia endosymbiont of Diaphorina citri	116598	PRJNA29451	29451	Proteobacteria	Alphaproteobacteria	1.2409	34.3	-	AMZJ01	104	1176	1035	1/2/13	4/17/17	Scaffold	National Psyllid Wolbachia Genome Consortium	SAMN02428956	GCA_000331595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/595/GCA_000331595.1_wACP3	23166822	-
Cedecea davisae DSM 4568	566551	PRJNA30753	30753	Proteobacteria	Gammaproteobacteria	4.88698	54.3	-	ATDT01	3	4552	4392	6/19/13	4/16/17	Scaffold	WUGSC	SAMN02436914	GCA_000412335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/335/GCA_000412335.2_ASM41233v2	-	DSM 4568
Pseudomonas tolaasii	29442	PRJNA379084	379084	Proteobacteria	Gammaproteobacteria	6.85668	60.5	chromosome:NZ_CP020369.1/CP020369.1	-	1	6268	6065	3/27/17	3/30/17	Chromosome	University of Reading	SAMN06579284	GCA_002072675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/675/GCA_002072675.1_ASM207267v1	-	2192T
Pseudomonas aeruginosa	287	PRJNA294254	294254	Proteobacteria	Gammaproteobacteria	6.68199	66.2	chromosome:NZ_CP012579.1/CP012579.1	-	1	6327	6153	9/8/16	3/20/17	Complete Genome	Nanyang Technological University	SAMN04910061	GCA_001722025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/025/GCA_001722025.1_ASM172202v1	-	PA_D5
Spiroplasma melliferum KC3	570509	PRJNA32299	32299	Terrabacteria group	Tenericutes	1.29794	27.0701	plasmid pSme1:NZ_AGBZ02000005.1/AGBZ02000005.1; plasmid pSme2:NZ_AGBZ02000006.1/AGBZ02000006.1	AGBZ02	6	1281	1208	11/22/11	4/9/17	Contig	"Research Institute for Physico-Chemical Medicine, Ministry of Public Health and Social Development of Russia"	SAMN02470890	GCA_000236085.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/085/GCA_000236085.3_SpiMel2.0	22129229	KC3
Peptoniphilus asaccharolyticus DSM 20463	573058	PRJEB20240	381569	Terrabacteria group	Firmicutes	2.23259	32.3	-	FWWR01	17	2275	2082	4/6/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN00017477	GCA_900176115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/115/GCA_900176115.1_IMG-taxon_2503982046_annotated_assembly	-	DSM 20463
Pseudomonas aeruginosa	287	PRJNA294254	294254	Proteobacteria	Gammaproteobacteria	6.63911	66.2	chromosome:NZ_CP012582.1/CP012582.1	-	1	6281	6116	9/8/16	3/21/17	Complete Genome	Nanyang Technological University	SAMN04914386	GCA_001722045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/045/GCA_001722045.1_ASM172204v1	-	PA_D21
Brachybacterium muris UCD-AY4	1249481	PRJNA178738	178738	Terrabacteria group	Actinobacteria	3.25747	70	-	AORC01	42	2959	2799	2/5/13	4/17/17	Scaffold	UC Davis Genome Center	SAMN01922053	GCA_000338055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/338/055/GCA_000338055.1_Brachybacterium_muris_str._UCD-AY4	23516213	UCD-AY4
Brevundimonas sp. GW460-12-10-14-LB2	1827469	PRJNA317678	317678	Proteobacteria	Alphaproteobacteria	3.26377	66.2	chromosome:NZ_CP015511.1/CP015511.1	-	1	3249	3140	5/4/16	4/12/17	Complete Genome	Lawrence Berkeley National Laboratory	SAMN04623151	GCA_001636925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/925/GCA_001636925.1_ASM163692v1	-	GW460-12-10-14-LB2
Palaeococcus ferrophilus DSM 13482	588319	PRJNA33583	33583	Euryarchaeota	Thermococci	2.20643	54.3	-	LANF01	23	2365	2246	3/30/15	4/17/17	Contig	DOE Joint Genome Institute	SAMN02744072	GCA_000966265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/265/GCA_000966265.1_ASM96626v1	-	DSM 13482
Planktothrix rubescens NIVA-CYA 407	1255374	PRJNA212880	212880	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.50994	39.6	-	AVFW01	5	4847	4598	9/6/13	4/17/17	Scaffold	University of Oslo	SAMN02261512	GCA_000464785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/785/GCA_000464785.1_NC407_1	23995927	NIVA-CYA 407
Sphingopyxis granuli	267128	PRJNA283604	283604	Proteobacteria	Alphaproteobacteria	4.67985	66.2	chromosome:NZ_CP012199.1/CP012199.1	-	1	4337	4202	2/11/16	4/11/17	Complete Genome	Centro Andaluz de Biologia del Desarrollo. Pablo de Olavide University	SAMN03653364	GCA_001559015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/015/GCA_001559015.1_ASM155901v1	26847793	TFA
Pseudomonas aeruginosa	287	PRJNA253624	253624	Proteobacteria	Gammaproteobacteria	6.79173	66.2	chromosome:NZ_CP008870.2/CP008870.2	-	1	6467	6286	1/15/16	4/17/17	Complete Genome	MSKCC	SAMN02894345	GCA_001516185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/185/GCA_001516185.2_ASM151618v2	-	W36662
Hymenobacter roseosalivarius DSM 11622	645990	PRJEB20236	381574	FCB group	Bacteroidetes/Chlorobi group	4.94848	56.4	-	FWWW01	123	4271	4090	4/6/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN00120144	GCA_900176135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/135/GCA_900176135.1_IMG-taxon_2502422321_annotated_assembly	-	DSM 11622
Pseudomonas aeruginosa	287	PRJNA253624	253624	Proteobacteria	Gammaproteobacteria	6.77757	66.2	chromosome:NZ_CP008871.2/CP008871.2	-	1	6475	6299	1/15/16	4/17/17	Complete Genome	MSKCC	SAMN02894344	GCA_001516205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/205/GCA_001516205.2_ASM151620v2	-	W45909
Pseudomonas aeruginosa	287	PRJNA253624	253624	Proteobacteria	Gammaproteobacteria	6.8967	66.2	chromosome:NZ_CP008864.2/CP008864.2	-	1	6552	6376	1/15/16	4/17/17	Complete Genome	MSKCC	SAMN02894343	GCA_001516225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/225/GCA_001516225.2_ASM151622v2	-	W60856
Pseudomonas aeruginosa	287	PRJNA253624	253624	Proteobacteria	Gammaproteobacteria	6.51734	66.2	chromosome:NZ_CP008856.2/CP008856.2	-	1	6113	5941	1/15/16	4/17/17	Complete Genome	MSKCC	SAMN02894358	GCA_001516245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/245/GCA_001516245.2_ASM151624v2	-	F23197
Clostridium celatum DSM 1785	545697	PRJNA30375	30375	Terrabacteria group	Firmicutes	3.55372	27.7	-	AMEZ01	122	3228	2995	12/10/12	4/17/17	Scaffold	Washington University Genome Sequencing Center	SAMN02436689	GCA_000320405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/320/405/GCA_000320405.1_ASM32040v1	-	DSM 1785
Deinococcus grandis	57498	PRJDB4362	305386	Terrabacteria group	Deinococcus-Thermus	4.0925	69.9	-	BCMS01	7	3946	3821	12/5/15	4/16/17	Contig	Japan Atomic Energy Agency	SAMD00043215	GCA_001485435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/435/GCA_001485435.1_ASM148543v1	26868384	ATCC 43672
Mycobacterium fortuitum	1766	PRJNA280545	280545	Terrabacteria group	Actinobacteria	6.25462	66.2	chromosome:NZ_CP011269.1/CP011269.1	-	1	6011	5857	10/7/15	4/4/17	Complete Genome	California Institute of Technology	SAMN03464915	GCA_001307545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/545/GCA_001307545.1_ASM130754v1	26507234	CT6
Cycloclasticus pugetii PS-1	655438	PRJNA38693	38693	Proteobacteria	Gammaproteobacteria	2.38392	42	-	ARVU01	1	2311	2262	4/26/13	4/17/17	Contig	JGI	SAMN02261262	GCA_000384415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/415/GCA_000384415.1_ASM38441v1	-	PS-1
Pseudomonas aeruginosa	287	PRJDB3600	282113	Proteobacteria	Gammaproteobacteria	6.61326	66.2	chromosome Unknown:NZ_AP014839.1/AP014839.2	-	1	6300	6150	4/22/15	3/19/17	Complete Genome	Tokushima University	SAMD00027370	GCA_001548135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/135/GCA_001548135.1_ASM154813v1	25999558	8380
Desulfonispora thiosulfatigenes DSM 11270	656914	PRJEB20235	381576	Terrabacteria group	Firmicutes	2.41217	31.9	-	FWWT01	31	2435	2278	4/6/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN00017405	GCA_900176035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/035/GCA_900176035.1_IMG-taxon_2501915963_annotated_assembly	-	DSM 11270
Pseudomonas aeruginosa	287	PRJNA237986	237986	Proteobacteria	Gammaproteobacteria	6.6031	66.2	chromosome:NZ_CP007399.1/CP007399.1	-	1	6262	6095	1/9/15	3/16/17	Complete Genome	MSKCC	SAMN02673269	GCA_000816985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/985/GCA_000816985.1_ASM81698v1	-	F22031
Haloarcula californiae ATCC 33799	662475	PRJNA174882	174882	Euryarchaeota	Halobacteria	4.40493	60.8	-	AOLS01	133	4405	4182	2/4/13	5/18/17	Contig	"University of California, Davis"	SAMN02471658	GCA_000337755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/755/GCA_000337755.1_ASM33775v1	25393412	ATCC 33799
Haloarcula sinaiiensis ATCC 33800	662476	PRJNA174883	174883	Euryarchaeota	Halobacteria	4.40516	60.8	-	AOLR01	84	4373	4185	2/4/13	5/18/17	Contig	"University of California, Davis"	SAMN02471645	GCA_000337275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/275/GCA_000337275.1_ASM33727v1	25393412	ATCC 33800
Haloarcula vallismortis ATCC 29715	662477	PRJNA174884	174884	Euryarchaeota	Halobacteria	3.9232	61.8	-	AOLQ01	69	3964	3825	2/4/13	3/29/17	Contig	"University of California, Davis"	SAMN02471656	GCA_000337775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/775/GCA_000337775.1_ASM33777v1	25393412	ATCC 29715
Haloferax denitrificans ATCC 35960	662478	PRJNA174885	174885	Euryarchaeota	Halobacteria	3.82597	66.3	-	AOLP01	21	3798	3660	2/4/13	4/17/17	Contig	"University of California, Davis"	SAMN02471644	GCA_000337795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/795/GCA_000337795.1_ASM33779v1	25393412	ATCC 35960
Mycobacterium sp. VKM Ac-1817D	1273687	PRJNA183985	183985	Terrabacteria group	Actinobacteria	6.32422	66.2	chromosome:NZ_CP009914.1/CP009914.1	-	1	6087	5941	11/25/14	4/9/17	Complete Genome	Center of Innovations and Technologies “Biologically active compounds and their applications”	SAMN02469803	GCA_000416365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/365/GCA_000416365.2_ASM41636v2	"2,347,443,525,635,030"	VKM Ac-1817D
Haloferax mucosum ATCC BAA-1512	662479	PRJNA174887	174887	Euryarchaeota	Halobacteria	3.36898	61.8	-	AOLN01	20	3409	3287	2/4/13	4/17/17	Contig	"University of California, Davis"	SAMN02471642	GCA_000337815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/815/GCA_000337815.1_ASM33781v1	25393412	ATCC BAA-1512
Haloferax sulfurifontis ATCC BAA-897	662480	PRJNA174888	174888	Euryarchaeota	Halobacteria	3.81243	66.3	-	AOLM01	29	3830	3664	2/4/13	4/17/17	Contig	"University of California, Davis"	SAMN02471686	GCA_000337835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/835/GCA_000337835.1_ASM33783v1	25393412	ATCC BAA-897
Mycobacterium kansasii 824	1299328	PRJNA260831	260831	Terrabacteria group	Actinobacteria	6.4023	66.2	chromosome:NZ_CP009483.1/CP009483.1	-	1	5640	5298	9/26/14	4/3/17	Complete Genome	BEI Resources/American Type	SAMN03067434	GCA_000831305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/305/GCA_000831305.1_ASM83130v1	-	824
Acidovorax temperans	80878	PRJNA270288	270288	Proteobacteria	Betaproteobacteria	4.47578	62.9	-	JXYQ01	141	4069	3887	3/2/15	4/17/17	Contig	University of Malaya	SAMN03265417	GCA_000935585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/585/GCA_000935585.1_ASM93558v1	-	KY4
Mycobacterium kansasii 662	1299326	PRJNA260705	260705	Terrabacteria group	Actinobacteria	6.38349	66.2	chromosome:CP009481.1	-	1	5528	4933	9/26/14	7/28/15	Complete Genome	BEI Resources/American Type	SAMN03067433	GCA_000831265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/265/GCA_000831265.1_ASM83126v1	-	662
Pseudomonas aeruginosa MTB-1	1415629	PRJNA225944	225944	Proteobacteria	Gammaproteobacteria	6.58004	66.2	chromosome:NC_023019.1/CP006853.1	-	1	6267	6104	12/5/13	3/15/17	Complete Genome	Tohoku University	SAMN02389526	GCA_000504045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/045/GCA_000504045.1_ASM50404v1	24459257	MTB-1
Mycobacterium kansasii ATCC 12478	557599	PRJNA30907	30907	Terrabacteria group	Actinobacteria	6.57723	66.1912	chromosome:NC_022663.1/CP006835.1; plasmid pMK12478:NC_022654.1/CP006836.1	-	2	5783	5497	11/1/13	4/2/17	Complete Genome	McGill University	SAMN02603596	GCA_000157895.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/895/GCA_000157895.2_ASM15789v2	-	ATCC 12478
Rhodoferax sp. DCY110	1842727	PRJNA361193	361193	Proteobacteria	Betaproteobacteria	5.89564	66.158	chromosome:NZ_CP019236.1/CP019236.1; plasmid unnamed1:NZ_CP019237.1/CP019237.1; plasmid unnamed2:NZ_CP019238.1/CP019238.1	-	3	5462	5302	1/18/17	4/17/17	Complete Genome	Korea University	SAMN06118135	GCA_001955695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/695/GCA_001955695.1_ASM195569v1	-	DCY110
Pseudomonas gingeri NCPPB 3146	707248	PRJNA41405	41405	Proteobacteria	Gammaproteobacteria	7.66664	62.3	-	AKBP01	75	6998	6334	7/23/12	5/19/17	Scaffold	University of Oxford	SAMN02471742	GCA_000280765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/765/GCA_000280765.1_ASM28076v1	-	NCPPB 3146
Actinomyces gerencseriae DSM 6844	1120943	PRJNA185531	185531	Terrabacteria group	Actinobacteria	3.42002	70.7	-	AUBN01	28	2853	2659	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441199	GCA_000429265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/265/GCA_000429265.1_ASM42926v1	-	DSM 6844
Actinomyces israelii DSM 43320	1120944	PRJNA215659	215659	Terrabacteria group	Actinobacteria	4.02577	71.4	-	JONS01	102	3363	3063	6/24/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02745698	GCA_000711965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/965/GCA_000711965.1_ASM71196v1	-	DSM 43320
Pseudomonas agarici	46677	PRJNA309076	309076	Proteobacteria	Gammaproteobacteria	5.502	59	chromosome:NZ_CP014135.1/CP014135.1	-	1	4901	4673	2/1/16	4/11/17	Chromosome	University of Reading	SAMN04420121	GCA_001543125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/125/GCA_001543125.1_ASM154312v1	-	NCPPB 2472
Aneurinibacillus aneurinilyticus ATCC 12856	649747	PRJNA38313	38313	Terrabacteria group	Firmicutes	5.31386	43.2	-	AWSJ01	286	5263	5014	9/11/13	4/9/17	Scaffold	Washington University Genome Center	SAMN02436721	GCA_000466385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/385/GCA_000466385.1_ASM46638v1	-	ATCC 12856
Salinibacter ruber DSM 13855	309807	PRJNA16159	16159	FCB group	Bacteroidetes/Chlorobi group	3.58733	66.1179	chromosome:NC_007677.1/CP000159.1; plasmid pSR35:NC_007678.1/CP000160.1	-	2	2898	2833	12/20/05	8/3/16	Complete Genome	TIGR	SAMN02604045	GCA_000013045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/045/GCA_000013045.1_ASM1304v1	16330755	DSM 13855; M31
Paenibacillus alvei DSM 29	1206781	PRJNA170044	170044	Terrabacteria group	Firmicutes	6.8346	45.9229	plasmid pPAV109:NZ_AMBZ01000023.1/AMBZ01000023.1; plasmid pPAV14:NZ_AMBZ01000025.1/AMBZ01000025.1; plasmid pPAV141:NZ_AMBZ01000022.1/AMBZ01000022.1; plasmid pPAV16:NZ_AMBZ01000024.1/AMBZ01000024.1	AMBZ01	25	6545	5975	8/28/12	5/19/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02470017	GCA_000293805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/805/GCA_000293805.1_ASM29380v1	23105091	DSM 29
Acidovorax sp. JS42	232721	PRJNA15685	15685	Proteobacteria	Betaproteobacteria	4.58515	66.1144	chromosome:NC_008782.1/CP000539.1; plasmid pAOVO01:NC_008765.1/CP000540.1; plasmid pAOVO02:NC_008766.1/CP000541.1	-	3	4383	4159	1/4/07	5/18/17	Complete Genome	DOE Joint Genome Institute	SAMN02598333	GCA_000015545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/545/GCA_000015545.1_ASM1554v1	-	JS42
Gordonibacter urolithinfaciens	1335613	PRJEB12277	327195	Terrabacteria group	Actinobacteria	3.29487	66.1	chromosome I:LT900217.1	-	1	-	-	9/12/17	9/12/17	Complete Genome	LIFESEQUENCING	SAMEA104162020	GCA_900199375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/199/375/GCA_900199375.1_G142160_polished_assembly_ID17483	-	-
Deinococcus hopiensis KR-140	695939	PRJEB20242	381573	Terrabacteria group	Deinococcus-Thermus	6.65087	64.9	-	FWWU01	11	6241	5842	4/6/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN00790413	GCA_900176165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/165/GCA_900176165.1_IMG-taxon_2509276064_annotated_assembly	-	KR-140
Stenotrophomonas maltophilia	40324	PRJEB6403	251923	Proteobacteria	Gammaproteobacteria	5.00426	66.1	chromosome 1:NZ_LT906480.1/LT906480.1	-	1	4685	4503	8/15/17	8/28/17	Complete Genome	SC	SAMEA4076705	GCA_900186865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/865/GCA_900186865.1_49243_F02	-	NCTC10257
Streptomyces ipomoeae 91-03	698759	PRJNA42363	42363	Terrabacteria group	Actinobacteria	10.4039	70.2	-	AEJC01	687	9164	8209	12/6/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436560	GCA_000317595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/595/GCA_000317595.1_Sipom9103v1.0	-	91-03
Pseudomonas aeruginosa	287	PRJNA361478	361478	Proteobacteria	Gammaproteobacteria	6.66196	66.1	chromosome:NZ_CP019338.1/CP019338.1	-	1	6296	6119	7/21/17	7/24/17	Complete Genome	Binzhou Univesity	SAMN06234157	GCA_002223805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/805/GCA_002223805.1_ASM222380v1	-	L10
Brevundimonas vesicularis	41276	PRJNA231221	231221	Proteobacteria	Alphaproteobacteria	3.34547	66.1	chromosome:NZ_CP022048.1/CP022048.1	-	1	3385	3268	6/27/17	6/29/17	Complete Genome	US Food and Drug Administration 	SAMN06173302	GCA_002208825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/825/GCA_002208825.1_ASM220882v1	-	FDAARGOS_289
Streptococcus ratti FA-1 = DSM 20564	699248	PRJNA42513	42513	Terrabacteria group	Firmicutes	2.06202	40.8	-	AJTZ01	6	1992	1929	8/8/12	4/7/17	Contig	Cornell University	SAMN02428953	GCA_000286075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/075/GCA_000286075.1_ASM28607v1	-	FA-1
Pseudomonas aeruginosa C-NN2	910265	PRJEB5222	282864	Proteobacteria	Gammaproteobacteria	6.90297	66.1	chromosome I:NZ_LT883143.1/LT883143.1	-	1	6575	6412	6/9/17	6/21/17	Complete Genome	MHH	SAMEA104083446	GCA_900185255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/255/GCA_900185255.1_NN2	-	-
Pseudomonas aeruginosa	287	PRJNA381838	381838	Proteobacteria	Gammaproteobacteria	6.89316	66.1	chromosome:NZ_CP020703.1/CP020703.1	-	1	6632	6432	4/18/17	4/24/17	Complete Genome	Nanyang Technological University	SAMN06689794	GCA_002104615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/615/GCA_002104615.1_ASM210461v1	-	PASGNDM345
Pseudomonas aeruginosa	287	PRJNA310735	310735	Proteobacteria	Gammaproteobacteria	6.72148	66.1	chromosome:NZ_CP015001.1/CP015001.1	-	1	6413	6247	10/20/16	3/20/17	Complete Genome	LNCC	SAMN04455104	GCA_001792835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/835/GCA_001792835.1_ASM179283v1	-	PA1088
Bordetella sp. H567	1697043	PRJNA287884	287884	Proteobacteria	Betaproteobacteria	5.53247	66.1	chromosome:NZ_CP012334.1/CP012334.1	-	1	5000	4864	8/12/16	4/13/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03940794	GCA_001704295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/295/GCA_001704295.1_ASM170429v1	27795250	H567
Thermanaeromonas toyohensis ToBE	698762	PRJEB20237	381575	Terrabacteria group	Firmicutes	3.33412	49.5	chromosome I:NZ_LT838272.1/LT838272.1	-	1	3369	3254	4/6/17	4/17/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN00808754	GCA_900176005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/005/GCA_900176005.1_IMG-taxon_2503538017_annotated_assembly	-	ToBE
Streptomyces turgidiscabies Car8	698760	PRJNA42361	42361	Terrabacteria group	Actinobacteria	10.8253	69.9	-	AEJB01	692	9763	9009	1/3/13	5/19/17	Contig	JCVI	SAMN02436476	GCA_000331005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/005/GCA_000331005.1_Sturgcar8v1.0	21087627	Car8
Vibrio navarrensis	29495	PRJNA242769	242769	Proteobacteria	Gammaproteobacteria	4.43939	48.4	-	JMCG01	2	4165	3851	10/7/14	4/9/17	Contig	CDC	SAMN02708866	GCA_000764325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/325/GCA_000764325.1_2540-90v1.0	25414502	ATCC 51183
Pseudomonas aeruginosa	287	PRJNA316664	316664	Proteobacteria	Gammaproteobacteria	6.82774	66.1	chromosome:NZ_CP015117.1/CP015117.1	-	1	6546	6376	4/12/16	3/20/17	Complete Genome	Universiteit van Amsterdam	SAMN04589231	GCA_001618925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/925/GCA_001618925.1_ASM161892v1	-	ATCC 27853
Pontibacter actiniarum DSM 19842	709015	PRJNA43369	43369	FCB group	Bacteroidetes/Chlorobi group	4.95258	53.1	-	AXBP01	23	4318	4224	9/30/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441121	GCA_000472485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/485/GCA_000472485.1_ASM47248v1	-	DSM 19842
Arsenophonus nasoniae DSM 15247	1121018	PRJNA185551	185551	Proteobacteria	Gammaproteobacteria	3.67055	37.5	-	AUCC01	296	3629	3207	7/15/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440620	GCA_000429565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/565/GCA_000429565.1_ASM42956v1	-	DSM 15247
Wolbachia endosymbiont of Wuchereria bancrofti	96496	PRJNA388334	388334	Proteobacteria	Alphaproteobacteria	1.06085	34.3	-	NJBR02	100	1028	809	6/21/17	7/11/17	Scaffold	University of Maryland Baltimore	SAMN07236930	GCA_002204235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/235/GCA_002204235.2_ASM220423v2	-	wWb
Pseudomonas aeruginosa	287	PRJNA253624	253624	Proteobacteria	Gammaproteobacteria	6.79435	66.1	chromosome:NZ_CP008873.1/CP008873.1	-	1	6432	6028	1/29/16	3/19/17	Complete Genome	MSKCC	SAMN02894359	GCA_001542835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/835/GCA_001542835.1_ASM154283v1	-	F9670
Pseudomonas aeruginosa	287	PRJNA253624	253624	Proteobacteria	Gammaproteobacteria	6.79574	66.1	chromosome:NZ_CP008866.2/CP008866.2	-	1	6435	6176	1/15/16	4/17/17	Complete Genome	MSKCC	SAMN02894349	GCA_001515915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/915/GCA_001515915.2_ASM151591v2	-	T38079
Pseudomonas aeruginosa	287	PRJNA253624	253624	Proteobacteria	Gammaproteobacteria	6.83641	66.1	chromosome:NZ_CP008861.1/CP008861.1	-	1	6525	6306	1/15/16	3/19/17	Complete Genome	MSKCC	SAMN02894353	GCA_001516345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/345/GCA_001516345.1_ASM151634v1	-	H47921
Labilithrix luteola	1391654	PRJNA291650	291650	Proteobacteria	delta/epsilon subdivisions	12.1915	66.1	chromosome:CP012333.1	-	1	11589	11518	8/7/15	8/19/15	Complete Genome	IMTECH-CSIR	SAMN03951129	GCA_001263205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/205/GCA_001263205.1_ASM126320v1	-	DSM 27648
Pseudomonas aeruginosa	287	PRJNA245215	245215	Proteobacteria	Gammaproteobacteria	6.71234	66.1	chromosome:NZ_CP010555.1/CP010555.1	-	1	6370	5981	1/29/15	3/16/17	Complete Genome	Mercer University	SAMN02732380	GCA_000829885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/885/GCA_000829885.1_ASM82988v1	-	FRD1
Pseudopropionibacterium propionicum F0230a	767029	PRJNA49291	49291	Terrabacteria group	Actinobacteria	3.44936	66.1	chromosome:NC_018142.1/CP002734.1	-	1	3078	2966	7/12/12	9/4/17	Complete Genome	J. Craig Venter Institute	SAMN02415616	GCA_000277715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/715/GCA_000277715.1_ASM27771v1	-	F0230a
Pseudomonas aeruginosa NCGM2.S1	1089456	PRJDA73453	73453	Proteobacteria	Gammaproteobacteria	6.76466	66.1	chromosome 1:NC_017549.1/AP012280.1	-	1	6476	6289	9/30/11	5/10/17	Complete Genome	National Center for Global Health and Medicine	SAMD00061003	GCA_000284555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/555/GCA_000284555.1_ASM28455v1	22123763	NCGM2.S1
Thiobacillus denitrificans ATCC 25259	292415	PRJNA13025	13025	Proteobacteria	Betaproteobacteria	2.90981	66.1	chromosome:NC_007404.1/CP000116.1	-	1	2852	2771	9/1/05	4/6/17	Complete Genome	DOE Joint Genome Institute	SAMN02598291	GCA_000012745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/745/GCA_000012745.1_ASM1274v1	16452431	ATCC 25259
Azotobacter chroococcum	353	PRJNA287026	287026	Proteobacteria	Gammaproteobacteria	5.02306	66.0979	chromosome:NZ_CP011835.1/CP011835.1; plasmid pacX50dB3a:NZ_CP011837.1/CP011837.1; plasmid pacX50fB3:NZ_CP011836.1/CP011836.1; plasmid pacx50dB3b:NZ_CP011838.1/CP011838.1	-	4	4688	4385	7/17/17	7/19/17	Complete Genome	Princeton University	SAMN03775251	GCA_002220155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/155/GCA_002220155.1_ASM222015v1	-	B3
Sphingomonas sp. LK11	1390395	PRJNA308272	308272	Proteobacteria	Alphaproteobacteria	3.93821	66.0897	chromosome:NZ_CP013916.1/CP013916.1; plasmid unnamed1:NZ_CP013918.1/CP013918.1; plasmid unnamed2:NZ_CP013917.1/CP013917.1	-	3	3655	3450	1/26/17	4/17/17	Complete Genome	KNU	SAMN04390191	GCA_001971605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/605/GCA_001971605.1_ASM197160v1	-	LK11
Aquiflexum balticum DSM 16537	758820	PRJEB20241	381572	FCB group	Bacteroidetes/Chlorobi group	5.98719	39.4	chromosome I:NZ_LT838813.1/LT838813.1	-	1	5065	4911	4/10/17	4/17/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN00777080	GCA_900176595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/595/GCA_900176595.1_IMG-taxon_2506520046_annotated_assembly	-	DSM 16537
Cardiobacterium valvarum F0432	797473	PRJNA49689	49689	Proteobacteria	Gammaproteobacteria	2.55354	58.2	-	AGCM01	98	2537	2334	12/21/11	4/17/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN02299434	GCA_000239355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/355/GCA_000239355.1_ASM23935v1	-	F0432
Mesorhizobium australicum	536018	PRJEB20435	382930	Proteobacteria	Alphaproteobacteria	5.85875	65	-	FXBL01	4	5833	5637	4/21/17	5/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02982922	GCA_900177325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/325/GCA_900177325.1_IMG-taxon_2622736609_annotated_assembly	-	B5P
Mesorhizobium huakuii 7653R	763057	PRJNA48425	48425	Proteobacteria	Alphaproteobacteria	6.88168	63.0275	chromosome:NZ_CP006581.1/CP006581.1; plasmid pMHa:NZ_CP006582.1/CP006582.1; plasmid pMHb:NZ_CP006583.1/CP006583.1	-	3	6839	6275	6/17/14	4/17/17	Chromosome	"State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan,China"	SAMN02904634	GCA_000709395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/395/GCA_000709395.1_ASM70939v1	24906389	7653R
Comamonadaceae bacterium B1	1458426	PRJDB1608	248036	Proteobacteria	Betaproteobacteria	2.62324	66.0813	chromosome:NZ_AP014569.1/AP014569.1; plasmid pSMB1:NZ_AP014570.1/AP014570.1	-	2	2427	2325	5/17/14	4/10/17	Complete Genome	J. Craig Venter Institute	SAMD00000326	GCA_000828915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/915/GCA_000828915.1_ASM82891v1	24845058	B1
Ralstonia mannitolilytica	105219	PRJNA278904	278904	Proteobacteria	Betaproteobacteria	4.84299	66.0418	chromosome 1:NZ_CP011257.1/CP011257.1; chromosome 2:NZ_CP011258.1/CP011258.1	-	2	4603	4449	4/22/16	4/12/17	Complete Genome	UCSF	SAMN03434877	GCA_001628775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/775/GCA_001628775.1_ASM162877v1	-	SN83A39
Halopenitus persicus	1048396	PRJDB4920	326751	Euryarchaeota	Halobacteria	3.10594	66.0045	chromosome:AP017558.1; plasmid pCBA1233:AP017559.1	-	2	-	-	6/24/16	6/24/16	Complete Genome	Korea Basic Science Institute	SAMD00053810	GCA_002355635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/635/GCA_002355635.1_ASM235563v1	-	CBA1233
Azospirillum lipoferum	193	PRJEB20438	382933	Proteobacteria	Alphaproteobacteria	7.77069	69.4	-	FXBR01	8	6801	6522	4/21/17	5/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02982994	GCA_900177475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/475/GCA_900177475.1_IMG-taxon_2622736628_annotated_assembly	-	R1C
Pseudomonas aeruginosa	287	PRJNA394047	394047	Proteobacteria	Gammaproteobacteria	6.95224	66	chromosome:NZ_CP022526.1/CP022526.1	-	1	6681	6477	7/31/17	8/3/17	Complete Genome	"Atmosphere and Ocean Research Institute, The University of Tokyo"	SAMN07347483	GCA_002237405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/405/GCA_002237405.1_ASM223740v1	-	Ocean-1155
Desulfovibrio termitidis HI1	644897	PRJNA50417	50417	Proteobacteria	delta/epsilon subdivisions	4.25795	66.1	-	AZAO01	1	3457	3317	12/5/13	4/17/17	Scaffold	JGI	SAMN02597169	GCA_000504305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/305/GCA_000504305.1_ASM50430v1	-	HI1
Pseudomonas aeruginosa	287	PRJNA394047	394047	Proteobacteria	Gammaproteobacteria	6.94322	66	chromosome:NZ_CP022525.1/CP022525.1	-	1	6672	6475	7/31/17	8/3/17	Complete Genome	"Atmosphere and Ocean Research Institute, The University of Tokyo"	SAMN07347485	GCA_002237425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/425/GCA_002237425.1_ASM223742v1	-	Ocean-1175
Bordetella genomosp. 9	1416803	PRJNA385118	385118	Proteobacteria	Betaproteobacteria	4.58737	66	chromosome:NZ_CP021109.1/CP021109.1	-	1	4214	4088	5/9/17	5/22/17	Complete Genome	University of Michigan	SAMN06767139	GCA_002119725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/725/GCA_002119725.1_ASM211972v1	-	AU17164
[Clostridium ultunense] DSM 10521	865861	PRJNA50507	50507	Terrabacteria group	Firmicutes	3.21669	32.9	-	AZSU01	12	3147	2865	12/27/13	4/9/17	Scaffold	"Institute of Plant Physiology and Ecology, SIBS, CAS."	SAMN02597372	GCA_000511955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/955/GCA_000511955.1_clostridium_ultunense	24504003	DSM 10521
Gillisia limnaea DSM 15749	865937	PRJNA50579	50579	FCB group	Bacteroidetes/Chlorobi group	3.96686	37.6	-	AHKR01	2	3560	3392	1/19/12	4/17/17	Scaffold	JGI	SAMN02261365	GCA_000243235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/235/GCA_000243235.1_ASM24323v1	23450183	DSM 15749
Cloacibacillus evryensis DSM 19522	866499	PRJNA50613	50613	Synergistetes	Synergistia	3.48846	56	-	JFBR01	1	3140	3009	3/3/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN00778811	GCA_000585335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/335/GCA_000585335.1_ASM58533v1	-	DSM 19522
Bordetella genomosp. 9	1416803	PRJNA385118	385118	Proteobacteria	Betaproteobacteria	4.49711	66	chromosome:NZ_CP021110.1/CP021110.1	-	1	4120	4015	5/9/17	5/22/17	Complete Genome	University of Michigan	SAMN06767135	GCA_002119745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/745/GCA_002119745.1_ASM211974v1	-	AU14267
Pseudomonas aeruginosa	287	PRJNA381838	381838	Proteobacteria	Gammaproteobacteria	6.9851	66	chromosome:NZ_CP020704.1/CP020704.1	-	1	6742	6545	4/18/17	4/24/17	Complete Genome	Nanyang Technological University	SAMN06689795	GCA_002104595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/595/GCA_002104595.1_ASM210459v1	-	PASGNDM699
Arthrobacter sp. QXT-31	1357915	PRJNA361372	361372	Terrabacteria group	Actinobacteria	5.04157	66	chromosome:NZ_CP019304.1/CP019304.1	-	1	4593	4379	1/23/17	4/17/17	Complete Genome	Chinese Academy of Sciences	SAMN06232496	GCA_001969265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/265/GCA_001969265.1_ASM196926v1	-	QXT-31
Pseudomonas aeruginosa	287	PRJNA310741	310741	Proteobacteria	Gammaproteobacteria	6.92874	66	chromosome:NZ_CP015002.1/CP015002.1	-	1	6642	6461	10/20/16	3/20/17	Complete Genome	LNCC	SAMN04455156	GCA_001792855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/855/GCA_001792855.1_ASM179285v1	-	PA8281
Saccharicrinis fermentans DSM 9555 = JCM 21142	869213	PRJNA50819	50819	FCB group	Bacteroidetes/Chlorobi group	5.98206	37.6	-	AZYH01	4	4654	4457	1/8/14	4/18/17	Scaffold	DOE Joint Genome Institute	SAMN02597284	GCA_000517085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/085/GCA_000517085.1_ASM51708v1	-	DSM 9555
Pseudomonas aeruginosa	287	PRJNA310742	310742	Proteobacteria	Gammaproteobacteria	7.00658	66	chromosome:NZ_CP015003.1/CP015003.1	-	1	6822	6637	10/20/16	3/20/17	Complete Genome	LNCC	SAMN04455162	GCA_001792875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/875/GCA_001792875.1_ASM179287v1	-	PA11803
Thiothrix nivea DSM 5205	870187	PRJNA51139	51139	Proteobacteria	Gammaproteobacteria	4.69171	54.9	-	AJUL01	4	4583	4359	4/27/12	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02256515	GCA_000260135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/135/GCA_000260135.1_ASM26013v1	22675589	DSM 5205
Methanotorris formicicus Mc-S-70	647171	PRJNA51819	51819	Euryarchaeota	Methanococci	1.81878	32.4	-	AGJL01	121	2014	1801	1/23/12	4/17/17	Contig	JGI	SAMN02261372	GCA_000243455.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/455/GCA_000243455.2_ASM24345v2	-	Mc-S-70
Lachnospiraceae bacterium oral taxon 082 str. F0431	861454	PRJNA50401	50401	Terrabacteria group	Firmicutes	2.94584	37.6	-	AGRL01	96	2827	2327	1/10/12	4/17/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN02299439	GCA_000242315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/315/GCA_000242315.1_ASM24231v1	-	F0431
Actinobaculum massiliense	202789	PRJEB10811	295454	Terrabacteria group	Actinobacteria	2.06519	60.2	-	CYUL01	4	1784	1701	9/23/15	4/11/17	Scaffold	URMITE	SAMEA3538285	GCA_001457435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/435/GCA_001457435.1_Actinobaculum_massiliense	-	FC3
Pseudomonas aeruginosa	287	PRJNA319532	319532	Proteobacteria	Gammaproteobacteria	7.02155	66	chromosome:NZ_CP015377.1/CP015377.1	-	1	6795	6512	4/26/16	3/20/17	Complete Genome	The Forsyth Institute	SAMN04893615	GCA_001632245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/245/GCA_001632245.1_ASM163224v1	-	BAMCPA07-48
Bergeyella zoohelcum ATCC 43767	883096	PRJNA52163	52163	FCB group	Bacteroidetes/Chlorobi group	2.33278	36.2	-	AGYA01	7	2173	2066	9/18/12	4/8/17	Scaffold	Broad Institute	SAMN02463902	GCA_000301075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/075/GCA_000301075.1_Berg_zooh_ATCC_43767_V1	-	ATCC 43767
Facklamia ignava CCUG 37419	883112	PRJNA52179	52179	Terrabacteria group	Firmicutes	1.76667	39	-	AGZE01	6	1690	1584	9/18/12	4/17/17	Scaffold	Broad Institute	SAMN02463906	GCA_000301055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/055/GCA_000301055.1_Fack_igna_CCUG_37419_V1	-	CCUG 37419
Massilia timonae	47229	PRJNA261342	261342	Proteobacteria	Betaproteobacteria	5.96926	65.8	-	JRYB01	1	5173	5007	11/4/16	4/13/17	Contig	Los Alamos National Laboratory	SAMN03072705	GCA_001866515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/515/GCA_001866515.1_GFC_26	-	NEU
Turicella otitidis ATCC 51513	883169	PRJNA52203	52203	Terrabacteria group	Actinobacteria	2.11829	71	-	AHAE01	6	1865	1735	9/13/12	4/10/17	Scaffold	Broad Institute	SAMN02463914	GCA_000296405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/405/GCA_000296405.1_Turi_otit_ATCC_51513_V1	-	ATCC 51513
Paenibacillus lactis 154	743719	PRJNA50329	50329	Terrabacteria group	Firmicutes	6.80595	51.8	-	AGIP01	56	6201	5960	10/18/11	5/19/17	Contig	JGI	SAMN02261364	GCA_000230915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/915/GCA_000230915.2_ASM23091v1	-	154
Variovorax sp. PAMC 28711	1795631	PRJNA310979	310979	Proteobacteria	Betaproteobacteria	4.31615	66	chromosome:NZ_CP014517.1/CP014517.1	-	1	4170	3979	2/29/16	4/11/17	Complete Genome	Korea Polar Research Institute	SAMN04457487	GCA_001577265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/265/GCA_001577265.1_ASM157726v1	-	PAMC 28711
Methanofollis liminatans DSM 4140	28892	PRJNA52839	52839	Euryarchaeota	Methanomicrobia	2.4751	61	chromosome:NZ_CM001555.1/CM001555.1	AGCO01	1	2485	2396	6/29/12	4/17/17	Chromosome	DOE Joint Genome Institute	SAMN02256542	GCA_000275865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/865/GCA_000275865.1_ASM27586v1	-	DSM 4140
Pseudomonas aeruginosa	287	PRJNA253624	253624	Proteobacteria	Gammaproteobacteria	6.93428	66	chromosome:NZ_CP008865.2/CP008865.2	-	1	6620	6399	1/15/16	4/17/17	Complete Genome	MSKCC	SAMN02894350	GCA_001515845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/845/GCA_001515845.2_ASM151584v2	-	S86968
Pseudomonas aeruginosa	287	PRJNA253624	253624	Proteobacteria	Gammaproteobacteria	6.46002	66	chromosome:NZ_CP008862.2/CP008862.2	-	1	6145	5934	1/15/16	4/17/17	Complete Genome	MSKCC	SAMN02894352	GCA_001516365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/365/GCA_001516365.2_ASM151636v2	-	M1608
Mycobacterium tusciae	75922	PRJNA354248	354248	Terrabacteria group	Actinobacteria	6.16288	65.7	-	MVIM01	70	6006	5798	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064262	GCA_002086795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/795/GCA_002086795.1_ASM208679v1	-	DSM 44153
Porphyromonas catoniae ATCC 51270	887901	PRJNA52993	52993	FCB group	Bacteroidetes/Chlorobi group	2.04017	51	-	JDFF01	25	1632	1548	2/6/14	4/9/17	Contig	Baylor College of Medicine	SAMN02344579	GCA_000565015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/015/GCA_000565015.1_PcatATCC51270v1.0	-	ATCC 51270
SAR116 cluster alpha proteobacterium HIMB100	909943	PRJNA56093	56093	Proteobacteria	Alphaproteobacteria	2.45894	50.5	-	AFXB01	10	2377	2311	11/10/11	8/21/17	Contig	Summer Course on Microbial Oceanography	SAMN02471789	GCA_000238815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/815/GCA_000238815.2_ASM23881v2	22675578	HIMB100
Leptothrix ochracea L12	735332	PRJNA56115	56115	Proteobacteria	Betaproteobacteria	0.510792	58	-	AJUC01	36	521	427	5/7/12	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02256546	GCA_000262525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/525/GCA_000262525.1_ASM26252v1	-	L12
Ewingella americana ATCC 33852	910964	PRJNA59551	59551	Proteobacteria	Gammaproteobacteria	4.86781	53.9	-	JMPJ01	92	4500	4351	7/28/14	4/17/17	Contig	UW-GEL (University of Wisconsin - Genome Evolution Laboratory)	SAMN02743045	GCA_000735345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/345/GCA_000735345.1_GEAM_DRAFTv1	-	ATCC 33852
Pseudomonas aeruginosa	287	PRJNA253624	253624	Proteobacteria	Gammaproteobacteria	6.89723	66	chromosome:NZ_CP008863.1/CP008863.1	-	1	6614	6387	1/15/16	3/19/17	Complete Genome	MSKCC	SAMN02894351	GCA_001516385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/385/GCA_001516385.1_ASM151638v1	-	M37351
Bacteroidetes bacterium oral taxon 272 str. F0290	888054	PRJNA53013	53013	FCB group	Bacteroidetes/Chlorobi group	2.50274	47.7	-	AUTU01	30	2136	2022	7/30/13	4/17/17	Contig	J. Craig Venter Institute	SAMN02436397	GCA_000442105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/105/GCA_000442105.1_BactbactF0290v01	-	F0290
Leptotrichia wadei DSM 19758	1122174	PRJNA169727	169727	Fusobacteria	Fusobacteriia	2.31653	29.3	-	ARDS01	64	2182	2019	4/19/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440426	GCA_000373345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/345/GCA_000373345.1_ASM37334v1	-	DSM 19758
Candidatus Magnetoglobus multicellularis str. Araruama	890399	PRJNA52963	52963	Proteobacteria	delta/epsilon subdivisions	12.4538	37.3	-	ATBP01	3705	10036	9987	1/7/14	3/7/17	Contig	LNCC	SAMN02597425	GCA_000516475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/475/GCA_000516475.1_Candidatus_Magnetoglobus_multicellularis	-	-
Pseudomonas aeruginosa	287	PRJDB4304	304293	Proteobacteria	Gammaproteobacteria	6.89702	66	chromosome Unknown:NZ_AP017302.1/AP017302.1	-	1	6539	6338	11/26/15	5/10/17	Complete Genome	"Department of Infectious Diseases, National Center for Global Health and Medicine"	SAMD00042491	GCA_001548335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/335/GCA_001548335.1_ASM154833v1	-	IOMTU 133
Thauera selenatis AX	905052	PRJEA72823	72823	Proteobacteria	Betaproteobacteria	9.14388	61	-	CACR01	1256	-	-	9/14/11	9/14/11	Contig	University of Exeter	SAMEA2271963	GCA_000284915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/915/GCA_000284915.1_ASM28491v1	21808043	ATCC 55363
Caballeronia glathei	60547	PRJNA238428	238428	Proteobacteria	Betaproteobacteria	8.63738	64.4	-	JFHC01	356	7898	7497	6/5/14	4/9/17	Contig	Laboratory of Biocatalysis and Synthetic Biotechnology	SAMN02671720	GCA_000698595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/595/GCA_000698595.1_SOAPdenovo_v1.05	24981326	DSM 50014
Thioalkalivibrio versutus	106634	PRJNA282574	282574	Proteobacteria	Gammaproteobacteria	2.96936	66	chromosome:NZ_CP011367.1/CP011367.1	-	1	2862	2727	6/5/15	4/10/17	Complete Genome	"Institute of Process Engineering, Chinese Academy of Sciences"	SAMN03571539	GCA_001020955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/955/GCA_001020955.1_ASM102095v1	-	D301
Pseudomonas aeruginosa	287	PRJDB3032	257569	Proteobacteria	Gammaproteobacteria	6.85095	66	chromosome:NZ_AP014646.1/AP014646.1	-	1	6612	6428	9/18/14	3/16/17	Complete Genome	National Center for Global Health and Medicine	SAMD00019082	GCA_000829255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/255/GCA_000829255.1_ASM82925v1	27055243	NCGM 1984
Yokenella regensburgei ATCC 49455	911023	PRJNA59563	59563	Proteobacteria	Gammaproteobacteria	4.85344	54.8	-	JMPS01	105	4706	4479	7/28/14	4/9/17	Contig	UW-GEL (University of Wisconsin - Genome Evolution Laboratory)	SAMN02743390	GCA_000735455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/455/GCA_000735455.1_GYRE_DRAFTv1	-	ATCC 49455
Staphylococcus simiae CCM 7213	911238	PRJNA59589	59589	Terrabacteria group	Firmicutes	2.58712	31.9	-	AEUN01	565	2444	2279	11/16/11	6/20/17	Contig	Cornell University	SAMN02428990	GCA_000235645.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/645/GCA_000235645.2_ASM23564v1	22272658	CCM 7213
Pseudomonas aeruginosa	287	PRJDB2972	255955	Proteobacteria	Gammaproteobacteria	6.81494	66	chromosome:NZ_AP014622.1/AP014622.1	-	1	6565	6373	8/1/14	5/10/17	Complete Genome	"Department of Infectious Diseases, National Center for Global Health and Medicine"	SAMD00018700	GCA_000829275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/275/GCA_000829275.1_ASM82927v1	-	NCGM 1900
Comamonadaceae bacterium A1	1458425	PRJDB1607	248035	Proteobacteria	Betaproteobacteria	2.57401	66	chromosome:NZ_AP014568.1/AP014568.1	-	1	2407	2312	5/17/14	4/10/17	Complete Genome	J. Craig Venter Institute	SAMD00000325	GCA_000828895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/895/GCA_000828895.1_ASM82889v1	24845058	A1
Rhodopseudomonas palustris HaA2	316058	PRJNA15747	15747	Proteobacteria	Alphaproteobacteria	5.33166	66	chromosome:NC_007778.1/CP000250.1	-	1	4785	4673	2/6/06	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02598335	GCA_000013365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/365/GCA_000013365.1_ASM1336v1	-	HaA2
Pseudarthrobacter chlorophenolicus A6	452863	PRJNA20011	20011	Terrabacteria group	Actinobacteria	4.98087	65.9781	chromosome:NC_011886.1/CP001341.1; plasmid pACHL01:NC_011879.1/CP001342.1; plasmid pACHL02:NC_011881.1/CP001343.1	-	3	4685	4505	1/9/09	8/28/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000051	GCA_000022025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/025/GCA_000022025.1_ASM2202v1	-	A6
Leptonema illini DSM 21528	929563	PRJNA60435	60435	Spirochaetes	Spirochaetia	4.52276	54.3	-	AHKT01	3	4278	4173	1/20/12	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02256522	GCA_000243335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/335/GCA_000243335.1_ASM24333v1	-	DSM 21528
Desulfosporosinus youngiae DSM 17734	768710	PRJNA60451	60451	Terrabacteria group	Firmicutes	5.66098	44.2	chromosome:NZ_CM001441.1/CM001441.1	AHLV01	1	5403	5114	1/24/12	5/18/17	Chromosome	JGI	SAMN02261386	GCA_000244895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/895/GCA_000244895.1_ASM24489v1	-	DSM 17734
Pseudomonas aeruginosa	287	PRJNA310740	310740	Proteobacteria	Gammaproteobacteria	7.06771	65.9508	chromosome:NZ_CP014999.1/CP014999.1; plasmid pPA7790:NZ_CP015000.1/CP015000.1	-	2	6828	6645	11/7/16	3/20/17	Complete Genome	LNCC	SAMN04455155	GCA_001870265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/265/GCA_001870265.1_ASM187026v1	-	PA7790
Sphingomonas koreensis	93064	PRJNA354050	354050	Proteobacteria	Alphaproteobacteria	4.81924	65.9451	chromosome:NZ_CP018820.1/CP018820.1; plasmid tig00000001:NZ_CP018821.1/CP018821.1	-	2	4646	4507	12/27/16	5/3/17	Complete Genome	NHGRI	SAMN06040428	GCA_001922385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/385/GCA_001922385.1_ASM192238v1	-	ABOJV
Bordetella flabilis	463014	PRJNA318508	318508	Proteobacteria	Betaproteobacteria	5.95432	65.9427	chromosome:NZ_CP016172.1/CP016172.1; plasmid unnamed1:NZ_CP016173.1/CP016173.1	-	2	5372	5238	6/27/16	4/17/17	Complete Genome	University of Michigan	SAMN05257178	GCA_001676725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/725/GCA_001676725.1_ASM167672v1	-	AU10664
Halobacterium salinarum NRC-1	64091	PRJNA217	217	Euryarchaeota	Halobacteria	2.57101	65.9192	chromosome:NC_002607.1/AE004437.1; plasmid pNRC100:NC_001869.1/AF016485.1; plasmid pNRC200:NC_002608.1/AE004438.1	-	3	2717	2611	7/14/00	4/6/17	Complete Genome	"University of Massachusetts-Amherst, University of Washington"	SAMN02604216	GCA_000006805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/006/805/GCA_000006805.1_ASM680v1	11016950	NRC-1; ATCC 700922
Sulfobacillus thermosulfidooxidans DSM 9293	929705	PRJEB20239	381578	Terrabacteria group	Firmicutes	3.86102	49.7	-	FWWY01	2	3845	3684	4/6/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN00768000	GCA_900176145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/145/GCA_900176145.1_IMG-taxon_2506210005_annotated_assembly	-	DSM 9293
Saccharomonospora cyanea NA-134	882082	PRJNA61997	61997	Terrabacteria group	Actinobacteria	5.4083	69.7	chromosome:NZ_CM001440.1/CM001440.1	AHLY01	1	5151	4970	1/24/12	5/19/17	Chromosome	DOE Joint Genome Institute	SAMN02256534	GCA_000244975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/975/GCA_000244975.1_ASM24497v1	-	NA-134
Methanolinea tarda NOBI-1	882090	PRJNA62035	62035	Euryarchaeota	Methanomicrobia	2.05286	56.5	chromosome:NZ_AGIY02000001.1/AGIY02000001.1	AGIY02	1	2089	2010	10/31/11	4/17/17	Chromosome	JGI	SAMN02261397	GCA_000235685.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/685/GCA_000235685.3_ASM23568v3	25189585	NOBI-1
Saccharomonospora marina XMU15	882083	PRJNA61991	61991	Terrabacteria group	Actinobacteria	5.96559	68.9	chromosome:NZ_CM001439.1/CM001439.1	AHLX01	1	5730	5536	1/24/12	5/19/17	Chromosome	JGI	SAMN02261396	GCA_000244955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/955/GCA_000244955.1_ASM24495v1	22768369	XMU15
Beggiatoa alba B18LD	395493	PRJNA62137	62137	Proteobacteria	Gammaproteobacteria	4.26515	40.7	-	AHMA01	3	3570	3446	1/24/12	5/18/17	Scaffold	JGI	SAMN02261399	GCA_000245015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/015/GCA_000245015.1_ASM24501v1	-	B18LD
Ectothiorhodospira haloalkaliphila ATCC 51935	765873	PRJNA62141	62141	Proteobacteria	Gammaproteobacteria	3.44843	63	-	AJUE01	4	3229	3067	4/21/14	4/17/17	Scaffold	JGI	SAMN00118193	GCA_000633935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/935/GCA_000633935.1_ASM63393v1	-	ATCC 51935
Saccharomonospora xinjiangensis XJ-54	882086	PRJNA62221	62221	Terrabacteria group	Actinobacteria	4.77601	68.9	-	AICV01	2	4439	4226	4/5/12	5/19/17	Scaffold	JGI	SAMN02261402	GCA_000258175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/175/GCA_000258175.1_ASM25817v1	-	XJ-54
Nodosilinea nodulosa PCC 7104	118166	PRJNA62311	62311	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.89128	57.7	-	ALVP01	2	6253	5983	11/1/12	4/17/17	Scaffold	JGI	SAMN02261265	GCA_000309385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/385/GCA_000309385.1_ASM30938v1	23277585	PCC 7104
Acinetobacter ursingii DSM 16037 = CIP 107286	981336	PRJNA183282	183282	Proteobacteria	Gammaproteobacteria	3.53574	40.2	-	APQA01	10	3312	3107	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN01087837	GCA_000368825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/825/GCA_000368825.1_Acin_ursi_CIP_107286_V1	-	CIP 107286
Ralstonia pickettii	329	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	4.81805	65.9077	chromosome 1:CP023537.1; chromosome 2:CP023538.1	-	2	4500	4367	9/28/17	9/28/17	Complete Genome	US Food and Drug Administration 	SAMN07312454	GCA_002393485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/485/GCA_002393485.1_ASM239348v1	-	FDAARGOS_410
Methanoplanus limicola DSM 2279	937775	PRJNA61291	61291	Euryarchaeota	Methanomicrobia	3.20095	42.2	chromosome:NZ_CM001436.1/CM001436.1	AHKP01	1	3092	2967	1/19/12	4/17/17	Chromosome	JGI	SAMN02261391	GCA_000243255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/255/GCA_000243255.1_ASM24325v1	-	DSM 2279
Myroides odoratus DSM 2801	929704	PRJNA61389	61389	FCB group	Bacteroidetes/Chlorobi group	4.30184	35.8	chromosome:NZ_CM001437.1/CM001437.1	AHKQ01	1	3878	3728	1/19/12	5/19/17	Chromosome	DOE Joint Genome Institute	SAMN02256523	GCA_000243275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/275/GCA_000243275.1_ASM24327v1	-	DSM 2801
Ralstonia pickettii DTP0602	1366050	PRJNA212545	212545	Proteobacteria	Betaproteobacteria	8.12585	65.9066	chromosome 3:CP006669.1; chromosome 1:CP006667.1; chromosome 2:CP006668.1	-	3	7587	7449	9/27/13	9/27/13	Complete Genome	Tohoku University	SAMN02259197	GCA_000471925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/925/GCA_000471925.1_ASM47192v1	-	DTP0602
Thermobrachium celere DSM 8682	941824	PRJEA61471	61471	Terrabacteria group	Firmicutes	2.64476	32.6	-	CAVN01	56	2464	2243	4/24/13	4/17/17	Scaffold	Tampere University of Technology	SAMEA2271948	GCA_000430995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/995/GCA_000430995.1_TC1	-	DSM 8682
Saccharomonospora paurometabolica YIM 90007	882084	PRJNA61823	61823	Terrabacteria group	Actinobacteria	4.6694	71.3	-	AGIT02	82	4783	3834	10/18/11	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02256527	GCA_000231035.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/035/GCA_000231035.3_ASM23103v3	-	YIM 90007
Bartonella rochalimae ATCC BAA-1498	685782	PRJNA81693	81693	Proteobacteria	Alphaproteobacteria	1.53414	35.9	-	AHPK01	3	1338	1214	6/12/14	4/17/17	Scaffold	Broad Institute	SAMN00778952	GCA_000706645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/645/GCA_000706645.1_Bart_roch_BMGH_V1	-	ATCC BAA-1498
Bartonella schoenbuchensis R1	687861	PRJNA360985	360985	Proteobacteria	Alphaproteobacteria	1.72849	37.8129	chromosome:NZ_CP019789.1/CP019789.1; plasmid pVbh_BscR1:NZ_CP019790.1/CP019790.1	-	2	1587	1330	3/7/17	3/10/17	Chromosome	University of Basel	SAMN06213864	GCA_002022685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/685/GCA_002022685.1_ASM202268v1	-	R1
Streptacidiphilus rugosus AM-16	981369	PRJNA234778	234778	Terrabacteria group	Actinobacteria	9.00286	71.8	-	JQMJ01	4	8258	7798	8/28/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02745414	GCA_000744655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/655/GCA_000744655.1_ASM74465v1	-	AM-16
uncultured Sphingopyxis sp.	310581	PRJEB13037	386644	Proteobacteria	Alphaproteobacteria	4.13986	65.9	chromosome SPPYR:LT598653.1	-	1	4004	3930	5/15/17	5/15/17	Complete Genome	Genoscope CEA	SAMEA3906800	GCA_900078365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/365/GCA_900078365.1_SPPYR_PRJEB13037v1	-	-
Metallosphaera yellowstonensis MK1	671065	PRJNA64481	64481	TACK group	Crenarchaeota	2.81745	47.7	-	AHKJ01	21	3152	2680	1/20/12	4/10/17	Scaffold	JGI	SAMN02261413	GCA_000243315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/315/GCA_000243315.1_ASM24331v1	-	MK1
Olsenella profusa F0195	1125712	PRJNA78893	78893	Terrabacteria group	Actinobacteria	2.72493	64.2	-	AWEZ01	73	2581	2440	9/19/13	4/17/17	Contig	J. Craig Venter Institute	SAMN00792224	GCA_000468755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/755/GCA_000468755.1_OprofF0195v1.0	-	F0195
Joostella marina DSM 19592	926559	PRJNA65069	65069	FCB group	Bacteroidetes/Chlorobi group	4.50824	33.6	-	AJUG01	2	3948	3808	4/27/12	5/18/17	Scaffold	JGI	SAMN02261416	GCA_000260115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/115/GCA_000260115.1_ASM26011v1	-	DSM 19592
Prevotella stercorea DSM 18206	1002367	PRJNA65131	65131	FCB group	Bacteroidetes/Chlorobi group	3.09732	49	-	AFZZ01	148	2680	2540	11/18/11	4/17/17	Scaffold	Washington University Genome Center	SAMN02299453	GCA_000235885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/885/GCA_000235885.1_ASM23588v1	-	DSM 18206
Pseudomonas aeruginosa	287	PRJNA253624	253624	Proteobacteria	Gammaproteobacteria	6.80884	65.9	chromosome:NZ_CP008869.2/CP008869.2	-	1	6470	6234	1/15/16	4/17/17	Complete Genome	MSKCC	SAMN02894346	GCA_001516165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/165/GCA_001516165.2_ASM151616v2	-	W16407
Raoultella planticola ATCC 33531	1005996	PRJNA65511	65511	Proteobacteria	Gammaproteobacteria	5.66803	55.8	-	JMPP01	83	5433	5170	7/28/14	4/2/17	Contig	UW-GEL	SAMN02743268	GCA_000735435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/435/GCA_000735435.1_GRPL_DRAFTv1	-	ATCC 33531
Pseudomonas aeruginosa	287	PRJDB3186	276726	Proteobacteria	Gammaproteobacteria	7.09069	65.9	chromosome Unknown:NZ_AP014651.1/AP014651.1	-	1	6910	6712	2/25/15	5/10/17	Complete Genome	National Center for Global Health and Medicine	SAMD00020552	GCA_001547955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/955/GCA_001547955.1_ASM154795v1	-	NCGM257
Trabulsiella guamensis ATCC 49490	1005994	PRJNA65507	65507	Proteobacteria	Gammaproteobacteria	4.92975	53.6	-	JMTB01	278	4820	4519	7/28/14	4/17/17	Contig	UW-GEL	SAMN02743388	GCA_000734965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/734/965/GCA_000734965.1_ASM73496v1	-	ATCC 49490
Tatumella ptyseos ATCC 33301	1005995	PRJNA207548	207548	Proteobacteria	Gammaproteobacteria	3.53905	51.6	-	ATMJ01	85	3385	3207	7/23/13	4/8/17	Contig	Public Health Agency of Canada	SAMN02199042	GCA_000439895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/895/GCA_000439895.1_atcc_33301_v1	-	ATCC 33301
Leminorella grimontii ATCC 33999 = DSM 5078	1005999	PRJNA185636	185636	Proteobacteria	Gammaproteobacteria	4.21999	53.9	-	AUUA01	37	3859	3723	7/19/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440792	GCA_000439085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/085/GCA_000439085.1_ASM43908v1	-	DSM 5078
Buttiauxella agrestis ATCC 33320	1006004	PRJNA65521	65521	Proteobacteria	Gammaproteobacteria	4.72582	50.8	-	JMPI01	93	4432	4258	7/28/14	4/9/17	Contig	UW-GEL	SAMN02742621	GCA_000735355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/355/GCA_000735355.1_GBAG_DRAFTv1	-	ATCC 33320
Meiothermus chliarophilus DSM 9957	926560	PRJNA66009	66009	Terrabacteria group	Deinococcus-Thermus	4.68896	68.9	-	AUQW01	9	4509	4161	7/15/13	4/17/17	Scaffold	JGI	SAMN00773126	GCA_000430045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/045/GCA_000430045.1_ASM43004v1	-	DSM 9957
Kluyvera ascorbata ATCC 33433	1006000	PRJNA65517	65517	Proteobacteria	Gammaproteobacteria	4.93235	54.3	-	JMPL01	253	4807	4451	7/28/14	4/9/17	Contig	UW-GEL	SAMN02743264	GCA_000735365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/365/GCA_000735365.1_GKAS_DRAFTv1	-	ATCC 33433
Pseudomonas aeruginosa	287	PRJNA376024	376024	Proteobacteria	Gammaproteobacteria	7.07741	65.8763	chromosome:NZ_CP020603.1/CP020603.1; plasmid pJHX613:NZ_CP020602.1/CP020602.1	-	2	6847	6631	4/11/17	4/13/17	Complete Genome	Universite Laval	SAMN06349407	GCA_002085755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/755/GCA_002085755.1_ASM208575v1	-	E6130952
Pseudomonas aeruginosa	287	PRJNA341318	341318	Proteobacteria	Gammaproteobacteria	6.95925	65.8714	chromosome:NZ_CP017099.1/CP017099.1; plasmid unnamed1:NZ_CP018048.1/CP018048.1	-	2	6725	6535	9/8/16	3/21/17	Complete Genome	 Northwest University	SAMN05717682	GCA_001722005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/005/GCA_001722005.2_ASM172200v2	-	DN1
Endozoicomonas montiporae CL-33	570277	PRJNA66389	66389	Proteobacteria	Gammaproteobacteria	5.43026	48.5	chromosome:NZ_CP013251.1/CP013251.1	-	1	5033	4722	3/8/16	5/29/17	Chromosome	"Biodiversity Research Center, Academia Sinica, Taiwan"	SAMN04155633	GCA_001583435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/435/GCA_001583435.1_ASM158343v1	27014194	CL-33
Candidatus Poribacteria bacterium WGA-4E	857041	PRJNA66473	66473	unclassified Bacteria	Bacteria candidate phyla	3.64767	49.5	-	AQTV01	521	-	-	4/19/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02256499	GCA_000372285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/285/GCA_000372285.1_ASM37228v1	23842652	WGA-4E
Candidatus Poribacteria bacterium WGA-4G	857042	PRJNA66475	66475	unclassified Bacteria	Bacteria candidate phyla	0.189191	47.3	-	AQPC01	15	-	-	4/15/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02256513	GCA_000364585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/585/GCA_000364585.1_ASM36458v1	23842652	WGA-4G
Candidatus Poribacteria bacterium WGA-4C	1027271	PRJNA66477	66477	unclassified Bacteria	Bacteria candidate phyla	1.62966	40.9	-	APGO01	276	-	-	5/22/13	7/29/15	Contig	LGC genomics	SAMN02472028	GCA_000401015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/015/GCA_000401015.1_WGA-4C	23842652	WGA-4C
Saccharomonospora saliphila YIM 90502	882085	PRJNA66541	66541	Terrabacteria group	Actinobacteria	4.03089	70.6	-	AICY01	145	4041	3391	4/25/13	4/17/17	Scaffold	JGI	SAMN02261268	GCA_000383795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/795/GCA_000383795.1_ASM38379v1	-	YIM 90502
Bosea sp. AS-1	2015316	PRJNA391800	391800	Proteobacteria	Alphaproteobacteria	5.83839	65.8346	chromosome:NZ_CP022372.1/CP022372.1; plasmid unnamed1:NZ_CP022370.1/CP022370.1; plasmid unnamed2:NZ_CP022371.1/CP022371.1	-	3	5667	5501	7/17/17	7/19/17	Complete Genome	China University of Geosciences	SAMN07286185	GCA_002220095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/095/GCA_002220095.1_ASM222009v1	-	AS-1
Thaumarchaeota archaeon SCGC AAA007-O23	913333	PRJNA66857	66857	TACK group	Thaumarchaeota	1.10444	35.7	-	ARWO01	32	-	-	5/29/13	7/28/15	Contig	JGI	SAMN02440520	GCA_000402075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/075/GCA_000402075.1_ASM40207v1	23851394	SCGC AAA007-O23
Marine Group III euryarchaeote SCGC AAA007-O11	913335	PRJNA66861	66861	Euryarchaeota	unclassified Euryarchaeota	0.233168	47	-	AQTW01	33	-	-	4/19/13	7/29/15	Contig	JGI	SAMN02261270	GCA_000372505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/505/GCA_000372505.1_ASM37250v1	-	SCGC AAA007-O11
Marine Group III euryarchaeote SCGC AAA288-E19	913336	PRJNA66863	66863	Euryarchaeota	unclassified Euryarchaeota	0.474487	50	-	AQTX01	102	-	-	4/25/13	7/29/15	Contig	JGI	SAMN02261271	GCA_000382725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/725/GCA_000382725.2_ASM38272v2	-	SCGC AAA288-E19
Marinimicrobia bacterium SCGC AAA003-E22	699266	PRJNA66867	66867	FCB group	Candidatus Marinimicrobia	0.888773	37	-	ASPI01	53	-	-	6/3/13	7/28/15	Contig	JGI	SAMN02441258	GCA_000405465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/465/GCA_000405465.1_ASM40546v1	23851394	SCGC AAA003-E22
Marinimicrobia bacterium SCGC AAA003-L08	939844	PRJNA66869	66869	FCB group	Candidatus Marinimicrobia	1.26563	30.3	-	ASPJ01	84	-	-	6/3/13	7/28/15	Contig	JGI	SAMN02440556	GCA_000405805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/805/GCA_000405805.1_ASM40580v1	23851394	SCGC AAA003-L08
SAR202 cluster bacterium SCGC AAA240-N13	913328	PRJNA66871	66871	Terrabacteria group	Chloroflexi	1.45623	55	-	AQTZ01	215	-	-	4/19/13	7/29/15	Contig	JGI	SAMN02261273	GCA_000372165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/165/GCA_000372165.1_ASM37216v1	-	SCGC AAA240-N13
Salinibacter ruber M8	761659	PRJNA48827	48827	FCB group	Bacteroidetes/Chlorobi group	3.83292	65.8339	chromosome:NC_014032.1/FP565814.1; plasmid pSR11:NC_014026.1/FP565810.1; plasmid pSR56:NC_014028.1/FP565811.1; plasmid pSR61:NC_014030.1/FP565812.1; plasmid pSR84:NC_014157.1/FP565813.1	-	5	3216	3121	4/7/10	4/8/17	Complete Genome	Genoscope	SAMEA3138292	GCA_000090405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/090/405/GCA_000090405.1_ASM9040v2	20164864	M8
Pseudomonas aeruginosa	287	PRJNA389181	389181	Proteobacteria	Gammaproteobacteria	7.05051	65.8	chromosome:NZ_CP022002.1/CP022002.1	-	1	6742	6303	6/22/17	8/21/17	Complete Genome	"Facultad de Medicina, Universidad Nacional Autonoma de Mexico"	SAMN05020326	GCA_002205375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/375/GCA_002205375.1_ASM220537v1	-	Pa1242
Pseudomonas aeruginosa	287	PRJNA389181	389181	Proteobacteria	Gammaproteobacteria	7.00852	65.8	chromosome:NZ_CP021774.1/CP021774.1	-	1	6699	6479	6/13/17	8/21/17	Complete Genome	"Facultad de Medicina, Universidad Nacional Autonoma de Mexico"	SAMN05020323	GCA_002192475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/475/GCA_002192475.1_ASM219247v1	-	Pa124
Pseudomonas aeruginosa	287	PRJNA389181	389181	Proteobacteria	Gammaproteobacteria	7.24158	65.8	chromosome:NZ_CP021775.1/CP021775.1	-	1	7015	6673	6/13/17	8/21/17	Complete Genome	"Facultad de Medicina, Universidad Nacional Autonoma de Mexico"	SAMN05020321	GCA_002192495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/495/GCA_002192495.1_ASM219249v1	-	Pa58
Altererythrobacter dongtanensis	692370	PRJNA319016	319016	Proteobacteria	Alphaproteobacteria	3.00949	65.8	chromosome:NZ_CP016591.1/CP016591.1	-	1	2932	2855	8/2/16	4/17/17	Complete Genome	"Second Institute of Oceanography, State Oceanic Administration"	SAMN04870882	GCA_001698205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/205/GCA_001698205.1_ASM169820v1	-	KCTC 22672
Pseudomonas aeruginosa DHS01	1411700	PRJNA224149	224149	Proteobacteria	Gammaproteobacteria	7.05575	65.8	chromosome:NZ_CP013993.1/CP013993.1	-	1	6882	6698	1/25/16	3/19/17	Complete Genome	Hospital of Besancon - France	SAMN02383553	GCA_000496455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/455/GCA_000496455.2_ASM49645v2	24874685	DHS01
Campylobacter mucosalis	202	PRJNA241482	241482	Proteobacteria	delta/epsilon subdivisions	1.75173	36.6	-	JHQQ01	42	1816	1586	6/12/14	4/10/17	Contig	National Center for Biotechnology	SAMN02690697	GCA_000705255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/255/GCA_000705255.1_Campylobacter_9_barcode	-	DSM 21682
Arcobacter cryaerophilus	28198	PRJNA307600	307600	Proteobacteria	delta/epsilon subdivisions	2.01974	27.4	-	LRUV01	64	2092	2020	2/25/16	4/12/17	Scaffold	Agriculture and Agri-Food Canada	SAMN04386089	GCA_001572875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/875/GCA_001572875.1_ASM157287v1	-	L406
Pseudomonas aeruginosa	287	PRJNA253624	253624	Proteobacteria	Gammaproteobacteria	7.27326	65.8	chromosome:NZ_CP008857.1/CP008857.1	-	1	6964	6717	1/15/16	3/19/17	Complete Genome	MSKCC	SAMN02894357	GCA_001516265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/265/GCA_001516265.1_ASM151626v1	-	F30658
Arcobacter skirrowii	28200	PRJNA307998	307998	Proteobacteria	delta/epsilon subdivisions	1.80719	27.8	-	LRUX01	36	1879	1810	2/25/16	4/12/17	Contig	Agriculture and Agri-Food Canada	SAMN04386098	GCA_001572925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/925/GCA_001572925.1_ASM157292v1	-	L403
Arcobacter thereius LMG 24486	1032240	PRJNA283692	283692	Proteobacteria	delta/epsilon subdivisions	1.90931	27	-	LLKQ01	1	1953	1883	7/26/16	4/13/17	Scaffold	Ghent University	SAMN03654041	GCA_001695395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/395/GCA_001695395.1_ASM169539v1	-	LMG 24486
Marine group II euryarchaeote SCGC AAA288-C18	1032475	PRJNA66859	66859	Euryarchaeota	unclassified Euryarchaeota	0.429678	56.8	-	ARPJ01	47	-	-	4/25/13	7/29/15	Contig	JGI	SAMN02261269	GCA_000382765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/765/GCA_000382765.1_ASM38276v1	-	SCGC AAA288-C18
actinobacterium SCGC AAA027-L06	913338	PRJNA66877	66877	Terrabacteria group	Actinobacteria	1.16358	41.7	-	AJWB01	75	1282	1244	9/4/12	7/29/15	Contig	JGI	SAMN02261425	GCA_000294575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/575/GCA_000294575.1_ASM29457v1	-	SCGC AAA027-L06
Corynebacterium durum F0235	1035195	PRJNA67201	67201	Terrabacteria group	Actinobacteria	2.80958	56.8	-	AMEM01	20	2567	2476	12/10/12	4/8/17	Scaffold	Washington University Genome Center	SAMN02436928	GCA_000318135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/135/GCA_000318135.1_ASM31813v1	-	F0235
Devosia sp. A16	1736675	PRJNA298125	298125	Proteobacteria	Alphaproteobacteria	5.03299	65.8	chromosome:NZ_CP012945.1/CP012945.1	-	1	4891	4758	10/22/15	4/11/17	Complete Genome	Jiangsu Academy of Agricultural Sciences	SAMN04156589	GCA_001402915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/915/GCA_001402915.1_ASM140291v1	-	A16
Pseudomonas synxantha	47883	PRJEB16480	349376	Proteobacteria	Gammaproteobacteria	6.84202	59.6	chromosome I:NZ_LT629786.1/LT629786.1	-	1	6313	6055	10/21/16	4/13/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216475	GCA_900105675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/675/GCA_900105675.1_IMG-taxon_2667527385_annotated_assembly	-	LMG 2190
Azoarcus sp. CIB	198107	PRJNA275310	275310	Proteobacteria	Betaproteobacteria	5.25703	65.8	chromosome:NZ_CP011072.1/CP011072.1	-	1	4755	4603	8/3/15	4/16/17	Complete Genome	CIB-CSIC	SAMN03342159	GCA_001190925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/190/925/GCA_001190925.1_ASM119092v1	-	CIB
Achromobacter xylosoxidans A8	762376	PRJNA48393	48393	Proteobacteria	Betaproteobacteria	7.35915	65.791	chromosome:NC_014640.1/CP002287.1; plasmid pA81:NC_014641.1/CP002288.1; plasmid pA82:NC_014642.1/CP002289.1	-	3	6858	6747	10/29/10	5/18/17	Complete Genome	"Institute of Molecular Genetics, Academy of Sciences of the Czech Republic"	SAMN02603404	GCA_000165835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/165/835/GCA_000165835.1_ASM16583v1	21097610	A8
Caulobacter henricii	69395	PRJNA257504	257504	Proteobacteria	Alphaproteobacteria	3.95729	65.7906	chromosome:NZ_CP013002.1/CP013002.1; plasmid CB4 plasmid:NZ_CP013003.1/CP013003.1	-	2	3759	3630	10/26/15	4/17/17	Complete Genome	university of south carolina	SAMN04208552	GCA_001414055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/055/GCA_001414055.1_ASM141405v1	-	CB4
Rhodococcus ruber BKS 20-38	1278076	PRJNA185259	185259	Terrabacteria group	Actinobacteria	6.1269	69.7	-	AOEX01	108	5615	5368	2/26/13	5/19/17	Contig	"Institute of Microbial Technology (IMTECH), Chandigarh, India 160036"	SAMN02470007	GCA_000341965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/965/GCA_000341965.1_Whole_genome_assembly	23558535	BKS 20-38
Oenococcus kitaharae DSM 17330	1045004	PRJNA67967	67967	Terrabacteria group	Firmicutes	1.84224	42.677	chromosome:NZ_CM001398.1/CM001398.1; plasmid unnamed:NZ_CM001399.1/CM001399.1	AFVZ01	2	1870	1789	1/3/12	4/7/17	Chromosome	The Australian Wine Research Institute	SAMN02471115	GCA_000241055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/055/GCA_000241055.1_ASM24105v1	22235313	DSM 17330
Erwinia tracheiphila PSU-1	1044999	PRJNA67977	67977	Proteobacteria	Gammaproteobacteria	4.71727	50	-	APJK01	27	4431	3580	5/30/13	6/15/17	Scaffold	USDA-ARS-Pacific Basin Agricultural Research Center	SAMN01939134	GCA_000404125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/125/GCA_000404125.1_Version_1_Erwinia_tracheiphila_PSU-1	-	PSU-1
Pseudomonas aeruginosa	287	PRJNA321921	321921	Proteobacteria	Gammaproteobacteria	6.85351	65.7828	chromosome:NZ_CP016214.1/CP016214.1; plasmid unnamed1:NZ_CP016215.1/CP016215.1	-	2	6566	6367	7/5/16	3/20/17	Complete Genome	South China University of Technology	SAMN05006707	GCA_001679685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/685/GCA_001679685.1_ASM167968v1	-	PA121617
Mycobacterium marinum E11	1131442	PRJEB5070	248803	Terrabacteria group	Actinobacteria	6.45052	65.7699	chromosome 1:NZ_HG917972.2/HG917972.2; plasmid II:NZ_HG917973.1/HG917973.1	-	2	5474	5250	5/27/14	4/10/17	Complete Genome	KAUST	SAMEA3139029	GCA_000723425.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/425/GCA_000723425.2_E11	-	E11
Celeribacter indicus	1208324	PRJNA170415	170415	Proteobacteria	Alphaproteobacteria	4.96939	65.7311	chromosome:NZ_CP004393.1/CP004393.1; plasmid pP73A:NZ_CP004394.1/CP004394.1; plasmid pP73B:NZ_CP004395.1/CP004395.1; plasmid pP73C:NZ_CP004396.1/CP004396.1; plasmid pP73D:NZ_CP004397.1/CP004397.1; plasmid pP73E:NZ_CP004398.1/CP004398.1	-	6	4860	4689	1/16/15	4/10/17	Complete Genome	The Third Institute of State Oceanic Administration (SOA)	SAMN03280159	GCA_000819565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/565/GCA_000819565.1_ASM81956v1	"2,525,670,625,582,340"	P73
Pseudomonas aeruginosa	287	PRJNA343072	343072	Proteobacteria	Gammaproteobacteria	7.21431	65.7303	chromosome:NZ_CP017293.1/CP017293.1; plasmid unnamed1:NZ_CP017294.1/CP017294.1	-	2	6892	6702	7/6/17	7/21/17	Complete Genome	Leibniz Institute DSMZ-German Collection of Microrganisms and Cell Cultures	SAMN05773092	GCA_002215345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/345/GCA_002215345.1_ASM221534v1	28630206	PA83
Lactobacillus malefermentans DSM 5705 = KCTC 3548	1122149	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.05466	41	-	AZGJ01	152	2039	1947	11/6/15	4/11/17	Contig	Shanghai Majorbio	SAMN02369504	GCA_001436395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/395/GCA_001436395.1_ASM143639v1	26415554	DSM 5705
Lactobacillus suebicus DSM 5007 = KCTC 3549	1423807	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.65131	39	-	AZGF01	81	2509	2384	11/6/15	4/11/17	Contig	Shanghai Majorbio	SAMN02369476	GCA_001434475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/475/GCA_001434475.1_ASM143447v1	26415554	DSM 5007
Lactobacillus mali KCTC 3596 = DSM 20444	1046596	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.59341	36.1	-	AYYH01	209	2557	2457	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369460	GCA_001436535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/535/GCA_001436535.1_ASM143653v1	26415554	DSM 20444
Lactobacillus zeae DSM 20178 = KCTC 3804	1423816	PRJNA222257	222257	Terrabacteria group	Firmicutes	3.12134	47.7	-	AZCT01	55	3142	2846	11/6/15	4/17/17	Scaffold	Shanghai Majorbio	SAMN02369511	GCA_001433745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/745/GCA_001433745.1_ASM143374v1	26415554	DSM 20178
Lactobacillus versmoldensis DSM 14857 = KCTC 3814	1423815	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.3732	38.3	-	AZFA01	62	2295	2211	11/6/15	4/11/17	Contig	Shanghai Majorbio	SAMN02369386	GCA_001434295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/295/GCA_001434295.1_ASM143429v1	26415554	DSM 14857
Rhodococcus fascians A44A	1051662	PRJNA233522	233522	Terrabacteria group	Actinobacteria	5.94704	64.6	-	JMEX01	9	5561	5421	9/30/14	4/2/17	Scaffold	Oregon State University	SAMN02569993	GCA_000760735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/735/GCA_000760735.1_R_fas_A44a	-	A44a
Acetobacteraceae bacterium AT-5844	1054213	PRJNA70153	70153	Proteobacteria	Alphaproteobacteria	5.19055	67	-	AGEZ01	157	4905	4693	12/16/11	5/18/17	Scaffold	Washington University Genome Center	SAMN02299459	GCA_000245075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/075/GCA_000245075.1_ASM24507v1	-	-
Brachybacterium paraconglomeratum LC44	1064537	PRJNA70629	70629	Terrabacteria group	Actinobacteria	3.78448	72.4	-	AGSO01	50	3437	3298	11/2/11	4/17/17	Contig	Michael G. DeGroote Institute for Infectious Disease Research	SAMN02470545	GCA_000233655.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/655/GCA_000233655.2_LC44-4.0	22509370	LC44
Burkholderia vietnamiensis G4	269482	PRJNA10696	10696	Proteobacteria	Betaproteobacteria	8.39107	65.7274	chromosome 1:CP000614.1; chromosome 2:CP000615.1; chromosome 3:CP000616.1; plasmid pBVIE01:CP000617.1; plasmid pBVIE02:CP000618.1; plasmid pBVIE03:CP000619.1; plasmid pBVIE04:CP000620.1; plasmid pBVIE05:CP000621.1	-	8	7863	7617	3/27/07	1/28/14	Complete Genome	US DOE Joint Genome Institute	SAMN02598263	GCA_000016205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/205/GCA_000016205.1_ASM1620v1	-	G4
Azotobacter chroococcum NCIMB 8003	1328314	PRJNA200545	200545	Proteobacteria	Gammaproteobacteria	5.19229	65.7148	chromosome:NZ_CP010415.1/CP010415.1; plasmid pAcX50a:NZ_CP010416.1/CP010416.1; plasmid pAcX50b:NZ_CP010417.1/CP010417.1; plasmid pAcX50c:NZ_CP010418.1/CP010418.1; plasmid pAcX50d:NZ_CP010419.1/CP010419.1; plasmid pAcX50e:NZ_CP010420.1/CP010420.1; plasmid pAcX50f:NZ_CP010421.1/CP010421.1	-	7	4799	4495	1/14/15	4/10/17	Complete Genome	University of Reading	SAMN03278357	GCA_000817975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/975/GCA_000817975.1_ASM81797v1	26061173	NCIMB 8003
Janibacter terrae NBRC 107853	1216972	PRJDB234	171902	Terrabacteria group	Actinobacteria	3.5762	71.7	-	BCUV01	11	3547	3407	2/27/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046504	GCA_001591405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/405/GCA_001591405.1_ASM159140v1	-	NBRC 107853
Dolichospermum circinale AWQC310F	553470	PRJNA179123	179123	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.40585	37.5	-	APIZ01	82	4079	3723	7/12/13	4/8/17	Scaffold	University of Western Sydney	SAMN02471999	GCA_000426925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/925/GCA_000426925.1_Acir310F	-	AWQC310F
Candidatus Paraburkholderia kirkii UZHbot1	1055526	PRJNA69825	69825	Proteobacteria	Betaproteobacteria	4.00944	62.8	-	CAFE01	203	6221	2069	10/2/11	8/8/13	Scaffold	University of Zurich	SAMEA3138402	GCA_000234195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/195/GCA_000234195.1_ASM23419v1	-	UZHbot1
Candidatus Haloredivivus sp. G17	1072681	PRJNA71229	71229	DPANN group	Candidatus Nanohaloarchaeota	1.1986	42	-	AGNT01	448	2259	2228	11/25/11	7/29/15	Contig	"Evolutionary Genomics Group, Laboratorio de Microbiologia, Universidad Miguel Hernandez, San Juan de Alicante, Alicante, Spain"	SAMN02469764	GCA_000236195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/195/GCA_000236195.2_ASM23619v1	-	G17
Mycobacterium marinum M	216594	PRJNA16725	16725	Terrabacteria group	Actinobacteria	6.66014	65.7077	chromosome:NC_010612.1/CP000854.1; plasmid pMM23:NC_010604.1/CP000895.1	-	2	5668	5481	4/15/08	5/19/17	Complete Genome	Wellcome Trust Sanger Institute	SAMN02604327	GCA_000018345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/345/GCA_000018345.1_ASM1834v1	18403782	M
Gordonia araii NBRC 100433	1073574	PRJNA71333	71333	Terrabacteria group	Actinobacteria	3.90655	68	-	BAEE01	98	3767	3623	11/19/11	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00041783	GCA_000241265.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/265/GCA_000241265.2_ASM24126v2	-	NBRC 100433
Bacillus aquimaris TF-12	1073842	PRJNA71387	71387	Terrabacteria group	Firmicutes	4.03545	37.3	-	LQXM01	30	4044	3913	5/19/16	4/12/17	Contig	Cinvestav-Irapuato	SAMN04403367	GCA_001648555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/555/GCA_001648555.1_ASM164855v1	-	TF12
Halomonas boliviensis LC1	1072583	PRJNA71239	71239	Proteobacteria	Gammaproteobacteria	4.20824	54.6	-	AGQZ01	21	3823	3655	11/21/11	5/18/17	Scaffold	San Simon University	SAMN02471366	GCA_000236035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/035/GCA_000236035.1_KUC0.1	-	LC1
Legionella anisa	28082	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.5644	38.3	-	NBTX01	4	4115	3915	4/10/17	4/13/17	Contig	US Food and Drug Administration 	SAMN04875537	GCA_002082905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/905/GCA_002082905.1_ASM208290v1	-	FDAARGOS_200
Clostridium cadaveris AGR2141	1280692	PRJNA185698	185698	Terrabacteria group	Firmicutes	3.54216	31.1	-	AUJL01	42	3410	3243	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440669	GCA_000424205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/205/GCA_000424205.1_ASM42420v1	-	AGR2141
Paenibacillus barengoltzii G22	1235795	PRJNA175987	175987	Terrabacteria group	Firmicutes	4.78123	51.9	-	ASSZ01	5	4326	4135	5/29/13	4/17/17	Scaffold	Broad Institute	SAMN01730996	GCA_000403375.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/375/GCA_000403375.2_Paen_bare_G22_V1	-	G22
Pseudomonas aeruginosa	287	PRJNA389181	389181	Proteobacteria	Gammaproteobacteria	7.1483	65.7	chromosome:NZ_CP022000.1/CP022000.1	-	1	6862	6565	6/22/17	8/21/17	Complete Genome	"Facultad de Medicina, Universidad Nacional Autonoma de Mexico"	SAMN05020324	GCA_002205355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/355/GCA_002205355.1_ASM220535v1	-	Pa127
Bacillus mojavensis RO-H-1 = KCTC 3706	1051501	PRJNA68567	68567	Terrabacteria group	Firmicutes	3.95702	43.7	-	AFSI01	29	4123	3675	1/25/12	4/10/17	Scaffold	Institute for Genome Sciences	SAMN02435826	GCA_000245335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/335/GCA_000245335.1_ASM24533v1	22493193	RO-H-1
Gordonia amarae NBRC 15530	1075090	PRJNA71719	71719	Terrabacteria group	Actinobacteria	5.30638	67.4	-	BAED01	83	4692	4520	11/19/11	5/18/17	Contig	National Institute of Technology and Evaluation	SAMD00041822	GCA_000241345.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/345/GCA_000241345.2_ASM24134v2	-	NBRC 15530
[Actinopolyspora] iraqiensis IQ-H1	882080	PRJNA72401	72401	Terrabacteria group	Actinobacteria	3.89597	71	-	AICW01	139	4061	3383	7/15/13	4/17/17	Scaffold	Joint Genome Institute	SAMN02441411	GCA_000430445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/445/GCA_000430445.1_ASM43044v1	-	IQ-H1
Pseudomonas aeruginosa	287	PRJNA389181	389181	Proteobacteria	Gammaproteobacteria	7.41186	65.7	chromosome:NZ_CP022001.1/CP022001.1	-	1	7161	6813	6/22/17	8/21/17	Complete Genome	"Facultad de Medicina, Universidad Nacional Autonoma de Mexico"	SAMN05020325	GCA_002208645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/645/GCA_002208645.1_ASM220864v1	-	Pa1207
Pseudomonas aeruginosa	287	PRJNA339235	339235	Proteobacteria	Gammaproteobacteria	7.38006	65.7	chromosome:NZ_CP016955.1/CP016955.1	-	1	7166	6916	4/11/17	4/13/17	Complete Genome	RIVM	SAMN05583819	GCA_002085605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/605/GCA_002085605.1_ASM208560v1	-	RIVM-EMC2982
Mycobacterium thermoresistibile ATCC 19527	1078020	PRJNA72237	72237	Terrabacteria group	Actinobacteria	4.87074	69	-	AGVE01	56	4641	4463	11/7/11	5/18/17	Contig	Tuberculosis Structural Genomics Consortium	SAMN02471087	GCA_000234585.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/585/GCA_000234585.2_ASM23458v1	-	ATCC 19527
Roseibacterium elongatum DSM 19469	1294273	PRJNA189501	189501	Proteobacteria	Alphaproteobacteria	3.55511	65.7	chromosome:NZ_CP004372.1/CP004372.1	-	1	3446	3108	3/14/14	4/17/17	Complete Genome	Roseobacter SFB	SAMN03081458	GCA_000590925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/925/GCA_000590925.1_ASM59092v1	-	DFL-43
Leucobacter chromiiresistens JG 31	714083	PRJNA72623	72623	Terrabacteria group	Actinobacteria	3.37343	68.4	-	AGCW01	29	2955	2710	10/21/11	4/7/17	Scaffold	Karlsruhe Institute of Technology	SAMN02470119	GCA_000231305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/305/GCA_000231305.1_ASM23130v1	22207746	JG 31
Methylocapsa acidiphila B2	395964	PRJNA72841	72841	Proteobacteria	Alphaproteobacteria	4.10343	61.8	-	ATYA01	2	3822	3660	7/15/13	4/17/17	Scaffold	Joint Genome Institute	SAMN02441570	GCA_000427445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/445/GCA_000427445.1_ASM42744v1	-	B2
Prevotella pleuritidis F0068	1081904	PRJNA72901	72901	FCB group	Bacteroidetes/Chlorobi group	2.70996	45	-	AWET01	51	2269	2140	9/16/13	4/9/17	Contig	J. Craig Venter Institute	SAMN02436482	GCA_000468135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/135/GCA_000468135.1_PpleuF0068v1.0	-	F0068
Mycobacterium bovis BCG str. ATCC 35743	998092	PRJNA63839	63839	Terrabacteria group	Actinobacteria	4.33406	65.7	chromosome:NZ_CP003494.1/CP003494.1	-	1	4226	3895	3/14/14	4/2/17	Complete Genome	"Microbial Genome Research Center, CASPMI, IM-CAS"	SAMN00771609	GCA_000194075.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/075/GCA_000194075.3_ASM19407v3	21478353	63839
Azotobacter vinelandii CA	1283330	PRJNA186698	186698	Proteobacteria	Gammaproteobacteria	5.36637	65.7	chromosome:NC_021149.1/CP005094.1	-	1	5024	4818	4/23/13	5/18/17	Complete Genome	North Carolina State University	SAMN01889086	GCA_000380335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/335/GCA_000380335.1_ASM38033v1	23792740	CA
Mycobacterium bovis BCG str. Mexico	717522	PRJNA45811	45811	Terrabacteria group	Actinobacteria	4.35039	65.7	chromosome:NC_016804.1/CP002095.1	-	1	4213	4019	11/9/11	5/19/17	Complete Genome	Universidad Nacional Autónoma de México	SAMN02604104	GCA_000234725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/725/GCA_000234725.1_ASM23472v1	21981907	Mexico
Flavobacterium frigoris	229204	PRJEB17009	351160	FCB group	Bacteroidetes/Chlorobi group	4.04571	34.2	-	FOFZ01	63	3555	3424	10/29/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444355	GCA_900111075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/075/GCA_900111075.1_IMG-taxon_2693429909_annotated_assembly	-	DSM 15719
Desulfarculus baarsii DSM 2075	644282	PRJNA37955	37955	Proteobacteria	delta/epsilon subdivisions	3.65573	65.7	chromosome:NC_014365.1/CP002085.1	-	1	3319	3244	7/29/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598521	GCA_000143965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/143/965/GCA_000143965.1_ASM14396v1	21304732	DSM 2075
Aquimarina agarilytica ZC1	620914	PRJNA73229	73229	FCB group	Bacteroidetes/Chlorobi group	4.25707	32.8	-	AHHE02	89	3532	3388	2/21/12	5/18/17	Scaffold	Shantou University	SAMN02470972	GCA_000255455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/455/GCA_000255455.1_ASM25545v1	22535944	ZC1
Mycobacterium mageritense DSM 44476 = CIP 104973	1209984	PRJEB5749	240185	Terrabacteria group	Actinobacteria	7.96661	66.9	-	CCBF01	6	7696	7473	3/26/14	4/9/17	Contig	URMITE	SAMEA3138978	GCA_000612825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/825/GCA_000612825.1_PRJEB5749_assembly_1	-	CIP 104973
Azotobacter vinelandii DJ	322710	PRJNA16	16	Proteobacteria	Gammaproteobacteria	5.36532	65.7	chromosome:NC_012560.1/CP001157.1	-	1	5022	4817	4/14/09	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02604349	GCA_000021045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/045/GCA_000021045.1_ASM2104v1	19429624	DJ; ATCC BAA-1303
Halobacterium salinarum R1	478009	PRJNA106	106	Euryarchaeota	Halobacteria	2.66878	65.6986	chromosome:NC_010364.1/AM774415.1; plasmid PHS1:NC_010366.1/AM774416.1; plasmid PHS2:NC_010369.1/AM774417.1; plasmid PHS3:NC_010368.1/AM774418.1; plasmid PHS4:NC_010367.1/AM774419.1	-	5	2794	2671	2/12/08	4/7/17	Complete Genome	Max Planck Institute	SAMEA3138275	GCA_000069025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/069/025/GCA_000069025.1_ASM6902v1	18313895	DSM 671 = R1
Rhodobacteraceae bacterium QY30	2033435	PRJNA401064	401064	Proteobacteria	Alphaproteobacteria	3.55117	65.693	chromosome:CP023454.1; plasmid unnamed:CP023455.1	-	2	-	-	9/25/17	9/25/17	Complete Genome	Nanjing Agricultural University	SAMN07594064	GCA_002356635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/635/GCA_002356635.1_ASM235663v1	-	QY30
Pelagibaca abyssi	1250539	PRJNA315492	315492	Proteobacteria	Alphaproteobacteria	5.25907	65.6901	chromosome:NZ_CP015093.1/CP015093.1; plasmid pPABY1:NZ_CP015091.1/CP015091.1; plasmid pPABY2:NZ_CP015090.1/CP015090.1; plasmid pPABY3:NZ_CP015092.1/CP015092.1; plasmid pPABY4:NZ_CP015095.1/CP015095.1; plasmid pPABY5:NZ_CP015089.1/CP015089.1; plasmid pPABY6:NZ_CP015094.1/CP015094.1; plasmid pPABY7:NZ_CP015097.1/CP015097.1; plasmid pPABY8:NZ_CP015096.1/CP015096.1	-	9	5080	4924	1/30/17	4/17/17	Complete Genome	Xiamen University	SAMN04562614	GCA_001975705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/705/GCA_001975705.1_ASM197570v1	-	JLT2014
Deinococcus proteolyticus MRP	693977	PRJNA41911	41911	Terrabacteria group	Deinococcus-Thermus	2.88684	65.6669	chromosome:NC_015161.1/CP002536.1; plasmid pDEIPR01:NC_015169.1/CP002537.1; plasmid pDEIPR02:NC_015162.1/CP002538.1; plasmid pDEIPR03:NC_015170.1/CP002539.1; plasmid pDEIPR04:NC_015163.1/CP002540.1	-	5	2767	2645	2/28/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00016729	GCA_000190555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/555/GCA_000190555.1_ASM19055v1	22768367	MRP
Magnetospirillum sp. XM-1	1663591	PRJEB11958	306466	Proteobacteria	Alphaproteobacteria	4.99248	65.6302	chromosome I:NZ_LN997848.1/LN997848.1; plasmid II:NZ_LN997849.1/LN997849.1	-	2	4671	4514	1/7/16	4/11/17	Complete Genome	IGGCAS	SAMEA3682505	GCA_001511835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/835/GCA_001511835.1_XM-1	-	-
Commensalibacter intestini A911	1088868	PRJNA73359	73359	Proteobacteria	Alphaproteobacteria	2.45478	36.8	-	AGFR01	26	2264	2167	10/21/11	4/17/17	Contig	"Seoul National University, Republic of Korea"	SAMN02470916	GCA_000231445.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/445/GCA_000231445.2_ASM23144v1	-	A911
Gluconobacter morbifer G707	1088869	PRJNA73361	73361	Proteobacteria	Alphaproteobacteria	2.88706	59	-	AGQV01	19	2730	2591	11/4/11	4/17/17	Contig	"Seoul National University, Republic of Korea"	SAMN02470912	GCA_000234355.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/355/GCA_000234355.2_ASM23435v1	-	G707
Halorientalis sp. IM1011	1932360	PRJNA360226	360226	Euryarchaeota	Halobacteria	3.77899	65.6229	chromosome:NZ_CP019067.1/CP019067.1; plasmid pHOS100:NZ_CP019069.1/CP019069.1; plasmid pHOS300:NZ_CP019068.1/CP019068.1	-	3	3874	3720	2/7/17	4/17/17	Complete Genome	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN06205239	GCA_001989615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/615/GCA_001989615.1_ASM198961v1	-	IM1011
Mycobacterium tuberculosis	1773	PRJNA379898	379898	Terrabacteria group	Actinobacteria	4.41772	65.6	chromosome:NZ_CP022014.1/CP022014.1	-	1	4289	4121	6/26/17	6/28/17	Complete Genome	Seoul National University	SAMN06622697	GCA_002208235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/235/GCA_002208235.1_ASM220823v1	-	MTB2
Mycobacterium tuberculosis	1773	PRJDB5607	386473	Terrabacteria group	Actinobacteria	4.41103	65.6	chromosome:AP018034.1	-	1	4115	4059	5/11/17	5/11/17	Complete Genome	"Department of International Health, Institute of Tropical Medicine, Nagasaki University"	SAMD00076256	GCA_002357935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/935/GCA_002357935.1_ASM235793v1	-	HN-205
Mycobacterium tuberculosis	1773	PRJDB5607	386473	Terrabacteria group	Actinobacteria	4.42154	65.6	chromosome:AP018035.1	-	1	4122	4066	5/11/17	5/11/17	Complete Genome	"Department of International Health, Institute of Tropical Medicine, Nagasaki University"	SAMD00076257	GCA_002357955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/955/GCA_002357955.1_ASM235795v1	-	HN-321
Xanthomonas vasicola pv. vasculorum NCPPB 702	559736	PRJNA31213	31213	Proteobacteria	Gammaproteobacteria	5.33372	62.1	-	ACHS01	96	4485	3825	8/25/09	4/18/17	Scaffold	The Sainsbury Laboratory	SAMN00002876	GCA_000159795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/795/GCA_000159795.2_ASM15979v2	20695894	NCPPB702
Leptospira kirschneri serovar Cynopteri str. 3522 CT	1049942	PRJNA74057	74057	Spirochaetes	Spirochaetia	4.40942	35.9	-	AHMN02	24	3985	3619	1/24/12	4/10/17	Contig	J. Craig Venter Institute	SAMN02436434	GCA_000243695.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/695/GCA_000243695.3_gls454049v02	-	3522 CT
Fangia hongkongensis FSC776 = DSM 21703	1089439	PRJNA165251	165251	Proteobacteria	Gammaproteobacteria	2.94674	37.9	-	ARAW01	37	2749	2655	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02256423	GCA_000379445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/445/GCA_000379445.1_ASM37944v1	-	DSM 21703
Picrophilus oshimae DSM 9789	1122961	PRJEB20343	382093	Euryarchaeota	Thermoplasmata	1.53415	36	-	FWYE01	6	1608	1530	4/8/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02745355	GCA_900176435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/435/GCA_900176435.1_IMG-taxon_2579779151_annotated_assembly	-	DSM 9789
Mycobacterium tuberculosis	1773	PRJDB5607	386473	Terrabacteria group	Actinobacteria	4.41336	65.6	chromosome:AP018036.1	-	1	4120	4064	5/11/17	5/11/17	Complete Genome	"Department of International Health, Institute of Tropical Medicine, Nagasaki University"	SAMD00076258	GCA_002357975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/975/GCA_002357975.1_ASM235797v1	-	HN-506
Mycobacterium tuberculosis	1773	PRJNA269967	269967	Terrabacteria group	Actinobacteria	4.42706	65.6	chromosome:NZ_CP017593.1/CP017593.1	-	1	4301	4098	5/1/17	5/3/17	Complete Genome	Universidad Nacional de Colombia - Sede Bogota	SAMN05833360	GCA_002116755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/116/755/GCA_002116755.1_ASM211675v1	-	Beijing-like/35049
Fluoribacter dumoffii NY 23	1094715	PRJNA74015	74015	Proteobacteria	Gammaproteobacteria	3.90967	39.6175	chromosome:NZ_CM001373.1/CM001373.1; plasmid pLDNY1:NZ_CM001374.1/CM001374.1; plasmid pLDNY2:NZ_CM001375.1/CM001375.1	AGVU01	3	3493	3367	11/23/11	4/7/17	Chromosome	Beijing Genomics Institute	SAMN02469353	GCA_000236165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/165/GCA_000236165.1_ASM23616v1	-	NY 23
Leptospira broomii serovar Hurstbridge str. 5399	1049789	PRJNA74059	74059	Spirochaetes	Spirochaetia	4.3959	43	-	AHMO02	12	4090	3991	1/24/12	4/17/17	Contig	J. Craig Venter Institute	SAMN02436587	GCA_000243715.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/715/GCA_000243715.3_gls454050v02	-	5399
Leptospira kmetyi serovar Malaysia str. Bejo-Iso9	1049970	PRJNA74061	74061	Spirochaetes	Spirochaetia	4.41843	44.8	-	AHMP02	4	4167	4062	1/24/12	4/17/17	Contig	J. Craig Venter Institute	SAMN02436507	GCA_000243735.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/735/GCA_000243735.3_gls454052v1.0	-	Bejo-Iso9
Leptospira alexanderi serovar Manhao 3 str. L 60	1049759	PRJNA74069	74069	Spirochaetes	Spirochaetia	4.22382	40.2	-	AHMT02	65	4251	3571	1/24/12	4/8/17	Contig	J. Craig Venter Institute	SAMN02436435	GCA_000243815.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/815/GCA_000243815.3_gls454062v02	-	L 60
Mycobacterium tuberculosis	1773	PRJNA269967	269967	Terrabacteria group	Actinobacteria	4.44159	65.6	chromosome:NZ_CP017594.1/CP017594.1	-	1	4311	4114	5/1/17	5/3/17	Complete Genome	Universidad Nacional de Colombia - Sede Bogota	SAMN05833361	GCA_002116775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/116/775/GCA_002116775.1_ASM211677v1	-	Beijing-like/36918
Salinispora pacifica CNR942	1169187	PRJNA175149	175149	Terrabacteria group	Actinobacteria	5.4733	69.1	-	ARGG01	52	5102	4693	4/19/13	4/11/17	Scaffold	DOE Joint Genome Institute	SAMN02440445	GCA_000374665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/665/GCA_000374665.1_ASM37466v1	-	CNR942
Achromobacter arsenitoxydans SY8	477184	PRJNA73989	73989	Proteobacteria	Betaproteobacteria	6.15666	66	-	AGUF01	105	5749	5558	12/5/11	5/18/17	Contig	Huazhong Agricultural University	SAMN02469904	GCA_000236785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/785/GCA_000236785.2_ASM23678v2	22328747	SY8
Marinobacter manganoxydans MnI7-9	1094979	PRJNA73991	73991	Proteobacteria	Gammaproteobacteria	4.54959	57.3	-	AGTR01	88	4186	4007	11/16/11	5/19/17	Contig	Huazhong Agricultural University	SAMN02471017	GCA_000235625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/625/GCA_000235625.2_ASM23562v1	22275098	MnI7-9
Mycobacterium tuberculosis	1773	PRJNA269967	269967	Terrabacteria group	Actinobacteria	4.43189	65.6	chromosome:NZ_CP017595.1/CP017595.1	-	1	4311	4116	5/1/17	5/3/17	Complete Genome	Universidad Nacional de Colombia - Sede Bogota	SAMN05833362	GCA_002116795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/116/795/GCA_002116795.1_ASM211679v1	-	Beijing-like/38774
Xanthomonas arboricola pv. juglandis	195709	PRJNA291479	291479	Proteobacteria	Gammaproteobacteria	5.21894	65.4	chromosome:NZ_CP012251.1/CP012251.1	-	1	4532	4186	8/5/15	4/6/17	Chromosome	Londrina State University	SAMN03944872	GCA_001237985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/985/GCA_001237985.1_ASM123798v1	26430043	Xaj 417
Staphylococcus arlettae CVD059	1212545	PRJNA170960	170960	Terrabacteria group	Firmicutes	2.56568	33.5	-	ALWK01	57	2506	2298	9/10/12	4/17/17	Contig	Madurai Kamaraj University	SAMN02470290	GCA_000295715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/715/GCA_000295715.1_ASM29571v1	23144377	CVD059
Sinorhizobium arboris LMG 14919	935557	PRJNA74465	74465	Proteobacteria	Alphaproteobacteria	6.8503	62	-	ATYB01	7	6459	6098	7/15/13	4/17/17	Scaffold	JGI	SAMN02440592	GCA_000427465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/465/GCA_000427465.1_ASM42746v1	-	LMG 14919
Endozoicomonas elysicola	305900	PRJNA252578	252578	Proteobacteria	Gammaproteobacteria	5.60637	46.8	-	JOJP01	2	4757	4573	6/23/14	4/10/17	Scaffold	Woods Hole Oceanographic Institution	SAMN02851610	GCA_000710775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/775/GCA_000710775.1_ASM71077v1	25125646	DSM 22380
Leptospira inadai serovar Lyme str. 10	1049790	PRJNA74055	74055	Spirochaetes	Spirochaetia	4.45787	44.6	-	AHMM02	27	4207	4047	1/24/12	4/8/17	Contig	J. Craig Venter Institute	SAMN02436595	GCA_000243675.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/675/GCA_000243675.3_gls454047v02	-	10
Mycobacterium tuberculosis	1773	PRJNA269967	269967	Terrabacteria group	Actinobacteria	4.40693	65.6	chromosome:NZ_CP017596.1/CP017596.1	-	1	4297	4016	5/1/17	5/3/17	Complete Genome	Universidad Nacional de Colombia - Sede Bogota	SAMN05833364	GCA_002116815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/116/815/GCA_002116815.1_ASM211681v1	-	Beijing/391
Mycobacterium tuberculosis	1773	PRJNA269967	269967	Terrabacteria group	Actinobacteria	4.44442	65.6	chromosome:NZ_CP017597.1/CP017597.1	-	1	4317	4124	5/1/17	5/3/17	Complete Genome	Universidad Nacional de Colombia - Sede Bogota	SAMN05833363	GCA_002116835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/116/835/GCA_002116835.1_ASM211683v1	-	Beijing-like/50148
Mycobacterium tuberculosis	1773	PRJNA269967	269967	Terrabacteria group	Actinobacteria	4.38016	65.6	chromosome:NZ_CP017598.1/CP017598.1	-	1	4271	4084	5/1/17	5/3/17	Complete Genome	Universidad Nacional de Colombia - Sede Bogota	SAMN05833359	GCA_002116855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/116/855/GCA_002116855.1_ASM211685v1	-	Beijing-like/1104
Mycobacterium tuberculosis	1773	PRJDB5608	384566	Terrabacteria group	Actinobacteria	4.39992	65.6	chromosome:AP018033.1	-	1	4083	4027	4/26/17	8/11/17	Complete Genome	"International Health, Institute of Tropical Medicine"	SAMD00076259	GCA_002356255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/255/GCA_002356255.1_ASM235625v1	-	HN-024
Magnetospirillum sp. ME-1	1639348	PRJNA280242	280242	Proteobacteria	Alphaproteobacteria	4.55187	65.6	chromosome:NZ_CP015848.1/CP015848.1	-	1	4252	4117	4/24/17	4/26/17	Complete Genome	"Wuhan institute of Virology, Chinese academy of science"	SAMN03459117	GCA_002105535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/535/GCA_002105535.1_ASM210553v1	-	ME-1
Mycobacterium tuberculosis	1773	PRJNA379898	379898	Terrabacteria group	Actinobacteria	4.43354	65.6	chromosome:NZ_CP020381.2/CP020381.2	-	1	4306	4129	3/27/17	4/17/17	Complete Genome	Seoul National University	SAMN06622696	GCA_002072775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/775/GCA_002072775.2_ASM207277v2	-	MTB1
Haemophilus paraphrohaemolyticus HK411	1095743	PRJNA75147	75147	Proteobacteria	Gammaproteobacteria	2.02121	40.8	-	AJMU01	78	2014	1885	4/30/12	4/7/17	Contig	J. Craig Venter Institute	SAMN00761819	GCA_000260675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/675/GCA_000260675.1_HparaphrohaemolyticusHK411v1.0	-	HK411
Pasteurella bettyae CCUG 2042	1095749	PRJNA75143	75143	Proteobacteria	Gammaproteobacteria	2.25316	36.1	-	AJSX01	47	2190	2078	5/10/12	4/7/17	Contig	J. Craig Venter Institute	SAMN00761813	GCA_000262245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/245/GCA_000262245.1_ASM26224v1	-	CCUG 2042
Bartonella washoensis Sb944nv	1094563	PRJNA75181	75181	Proteobacteria	Alphaproteobacteria	1.97082	38.9	-	AILU01	11	1742	1568	7/13/12	4/7/17	Scaffold	Broad Institute	SAMN02596899	GCA_000278135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/135/GCA_000278135.1_Bart_wash_Sb944nv_V1	-	Sb944nv
Bartonella elizabethae Re6043vi	1094554	PRJNA75185	75185	Proteobacteria	Alphaproteobacteria	1.95992	38.4	-	AILW01	8	1721	1583	7/13/12	4/7/17	Scaffold	Broad Institute	SAMN02596901	GCA_000278175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/175/GCA_000278175.1_Bart_eliz_Re6043vi_V1	-	Re6043vi
Bartonella doshiae NCTC 12862 = ATCC 700133	1094553	PRJNA75183	75183	Proteobacteria	Alphaproteobacteria	1.81018	38	-	AILV01	7	1613	1475	7/13/12	4/7/17	Scaffold	Broad Institute	SAMN02596900	GCA_000278155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/155/GCA_000278155.1_Bart_dosh_NCTC_12862_R18_V1	-	NCTC 12862
Bartonella rattimassiliensis 15908	1094556	PRJNA75189	75189	Proteobacteria	Alphaproteobacteria	2.17065	37.2	-	AILY01	12	1810	1602	7/13/12	4/7/17	Scaffold	Broad Institute	SAMN02596903	GCA_000278215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/215/GCA_000278215.1_Bart_ratt_15908_V1	-	15908
Mycobacterium tuberculosis H37Ra	419947	PRJNA329548	329548	Terrabacteria group	Actinobacteria	4.42611	65.6	chromosome:NZ_CP016972.1/CP016972.1	-	1	4299	4149	1/6/17	3/14/17	Complete Genome	San Diego State University	SAMN05414673	GCA_001938725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/725/GCA_001938725.1_ASM193872v1	-	H37Ra
Bartonella birtlesii IBS 325	1095900	PRJNA86617	86617	Proteobacteria	Alphaproteobacteria	1.83401	37.8008	chromosome:NZ_CM001557.1/CM001557.1	AKIP01	1	1627	1415	6/18/12	4/7/17	Chromosome	URMITE	SAMN02472046	GCA_000273375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/375/GCA_000273375.1_ASM27337v1	22887676	IBS 325
Bartonella melophagi K-2C	1094557	PRJNA75193	75193	Proteobacteria	Alphaproteobacteria	1.57123	37.4	-	AIMA01	13	1352	1212	7/13/12	4/17/17	Scaffold	Broad Institute	SAMN02596905	GCA_000278255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/255/GCA_000278255.1_Bart_melo_K-2C_V1	-	K-2C
Bartonella tamiae Th307	1094559	PRJNA75205	75205	Proteobacteria	Alphaproteobacteria	2.25495	38	-	AIMG01	1	2043	1961	7/13/12	4/7/17	Scaffold	Broad Institute	SAMN02596911	GCA_000279995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/995/GCA_000279995.1_Bart_tami_Th307_V1	-	Th307
Bartonella taylorii 8TBB	1094560	PRJNA75199	75199	Proteobacteria	Alphaproteobacteria	2.01568	39.1	-	AIMD01	14	1747	1567	7/13/12	4/7/17	Scaffold	Broad Institute	SAMN02596908	GCA_000278295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/295/GCA_000278295.1_Bart_tayl_8TBB_V1	-	8TBB
Bartonella alsatica IBS 382	1094551	PRJNA75201	75201	Proteobacteria	Alphaproteobacteria	1.6739	37.1	-	AIME01	1	1417	1254	7/13/12	4/17/17	Scaffold	Broad Institute	SAMN02596909	GCA_000280015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/015/GCA_000280015.1_Bart_alsa_IBS_382_V1	-	IBS 382
Mycobacterium tuberculosis	1773	PRJNA357378	357378	Terrabacteria group	Actinobacteria	4.41151	65.6	chromosome:NZ_CP018778.1/CP018778.1	-	1	4283	4106	12/27/16	3/14/17	Complete Genome	Statens Serum Institut	SAMN06141171	GCA_001922485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/485/GCA_001922485.1_ASM192248v1	-	DK9897
Bartonella bovis 91-4	1094491	PRJNA73945	73945	Proteobacteria	Alphaproteobacteria	1.62467	37.4	chromosome:NZ_CM001844.1/CM001844.1	AGWA01	1	2809	2627	4/10/13	4/8/17	Chromosome	Uppsala University	SAMN02472039	GCA_000384965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/965/GCA_000384965.1_BBbMcIrM01	23555299	91-4
Mesorhizobium alhagi CCNWXJ12-2	1107882	PRJNA75087	75087	Proteobacteria	Alphaproteobacteria	6.96895	62.7	-	AHAM01	375	6981	6376	12/1/11	5/19/17	Contig	Northwest A&F University	SAMN02470709	GCA_000236565.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/565/GCA_000236565.2_ASM23656v2	22328758	CCNWXJ12-2
Adhaeribacter aquaticus DSM 16391	926549	PRJNA76501	76501	FCB group	Bacteroidetes/Chlorobi group	5.16809	39.6	-	AXBK01	4	4512	4420	9/30/13	4/17/17	Scaffold	JGI	SAMN02441120	GCA_000473365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/365/GCA_000473365.1_ASM47336v1	-	DSM 16391
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38613	65.6	chromosome:NZ_CP018303.1/CP018303.1	-	1	4258	4104	12/9/16	3/14/17	Complete Genome	"CETR, HSPH, Megan Murray, director"	SAMN06010135	GCA_001895765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/765/GCA_001895765.1_ASM189576v1	-	I0004241-1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35982	65.6	chromosome:NZ_CP018305.1/CP018305.1	-	1	4239	4083	12/9/16	3/14/17	Complete Genome	"CETR, HSPH, Megan Murray, director"	SAMN06010493	GCA_001895785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/785/GCA_001895785.1_ASM189578v1	-	M0018684-2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36572	65.6	chromosome:NZ_CP018302.1/CP018302.1	-	1	4252	4091	12/9/16	3/14/17	Complete Genome	"CETR, HSPH, Megan Murray, director"	SAMN06010122	GCA_001895805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/805/GCA_001895805.1_ASM189580v1	-	I0004000-1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37607	65.6	chromosome:NZ_CP018301.1/CP018301.1	-	1	4254	4112	12/9/16	3/14/17	Complete Genome	"CETR, HSPH, Megan Murray, director"	SAMN06010171	GCA_001895825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/825/GCA_001895825.1_ASM189582v1	-	I0002801-4
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38558	65.6	chromosome:NZ_CP018300.1/CP018300.1	-	1	4259	4104	12/9/16	3/14/17	Complete Genome	"CETR, HSPH, Megan Murray, director"	SAMN06010490	GCA_001895845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/845/GCA_001895845.1_ASM189584v1	-	I0002353-6
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38645	65.6	chromosome:NZ_CP018304.1/CP018304.1	-	1	4259	4102	12/9/16	3/14/17	Complete Genome	"CETR, HSPH, Megan Murray, director"	SAMN06010343	GCA_001895865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/865/GCA_001895865.1_ASM189586v1	-	M0002959-6
Sphingomonas echinoides ATCC 14820	1112212	PRJNA76627	76627	Proteobacteria	Alphaproteobacteria	4.26494	64.4	-	AHIR01	6	3964	3838	12/30/11	5/19/17	Scaffold	Korea Polar Research Institute	SAMN02470172	GCA_000241465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/465/GCA_000241465.1_ASM24146v1	22408244	ATCC 14820
alpha proteobacterium SCGC AAA028-C07	938639	PRJNA76829	76829	Proteobacteria	Alphaproteobacteria	0.846566	29.5	-	ATTB01	32	-	-	7/9/13	7/29/15	Contig	JGI	SAMN02441251	GCA_000419465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/465/GCA_000419465.1_ASM41946v1	-	SCGC AAA028-C07
Mycobacterium tuberculosis	1773	PRJDB5220	356037	Terrabacteria group	Actinobacteria	4.3806	65.6	chromosome:AP017901.1	-	1	4349	4294	12/1/16	12/1/16	Complete Genome	"Department of Infectious Diseases, Research Institute, National Center for Global Health and Medicine"	SAMD00065354	GCA_002356015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/015/GCA_002356015.1_ASM235601v1	-	NCGM946K2
Mycobacterium tuberculosis	1773	PRJNA349996	349996	Terrabacteria group	Actinobacteria	4.42586	65.6	chromosome:NZ_CP017920.1/CP017920.1	-	1	4308	4120	11/7/16	3/14/17	Complete Genome	Michigan State University	SAMN05933692	GCA_001870145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/145/GCA_001870145.1_ASM187014v1	-	TB282
Saccharibacillus sacchari DSM 19268	915437	PRJNA76571	76571	Terrabacteria group	Firmicutes	6.07524	52.7	-	JFBU01	1	5338	5181	3/3/14	4/17/17	Scaffold	JGI	SAMN02849402	GCA_000585395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/395/GCA_000585395.1_ASM58539v1	-	DSM 19268
Mycobacterium tuberculosis	1773	PRJNA304069	304069	Terrabacteria group	Actinobacteria	4.40203	65.6	chromosome:NZ_CP013475.1/CP013475.1	-	1	4277	4085	10/27/16	3/14/17	Complete Genome	Huazhong Agricultural University	SAMN04293604	GCA_001855255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/255/GCA_001855255.1_ASM185525v1	-	1458
Mycobacterium tuberculosis	1773	PRJNA273899	273899	Terrabacteria group	Actinobacteria	4.37859	65.6	chromosome:NZ_CP011510.1/CP011510.1	-	1	4250	4068	10/3/16	3/13/17	Complete Genome	"Beijing Chest Hospital, Capital Medical University"	SAMN03301665	GCA_001750865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/865/GCA_001750865.1_ASM175086v1	-	Beijing
Janthinobacterium lividum	29581	PRJNA284195	284195	Proteobacteria	Betaproteobacteria	6.59856	62.3	-	LFKP01	16	5893	5741	10/26/16	4/5/17	Scaffold	Okayama University of Science	SAMN03701689	GCA_001854915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/915/GCA_001854915.1_ASM185491v1	-	MEG1
Actinoalloteichus spitiensis RMV-1378	1114962	PRJNA76807	76807	Terrabacteria group	Actinobacteria	5.70653	72.5	-	AGVX02	888	4946	4487	12/20/11	5/18/17	Contig	"Institute of Microbial Technology(IMTECH),Chandigarh,India"	SAMN02470010	GCA_000239155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/155/GCA_000239155.2_ASM23915v2	-	RMV-1378
Mycobacterium tuberculosis	1773	PRJNA335537	335537	Terrabacteria group	Actinobacteria	4.43939	65.6	chromosome:NZ_CP016888.1/CP016888.1	-	1	4308	4104	8/19/16	3/13/17	Complete Genome	Scientific Center for Anti-infectious Drugs (SCAID)	SAMN05447658	GCA_001708265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/265/GCA_001708265.1_ASM170826v1	-	SCAID 252.0
Lactobacillus rossiae DSM 15814	1114972	PRJNA185359	185359	Terrabacteria group	Firmicutes	2.86229	43.3	-	AUAW01	39	2756	2614	7/15/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441207	GCA_000428925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/925/GCA_000428925.1_ASM42892v1	-	DSM 15814
alpha proteobacterium SCGC AAA487-M09	938672	PRJNA77029	77029	Proteobacteria	Alphaproteobacteria	0.627365	29.1	-	ATTC01	97	-	-	7/9/13	7/29/15	Contig	JGI	SAMN02440558	GCA_000419485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/485/GCA_000419485.1_ASM41948v1	-	SCGC AAA487-M09
Wolbachia pipientis	955	PRJNA343941	343941	Proteobacteria	Alphaproteobacteria	0.975127	32.2	-	MJMG01	12	974	859	10/5/16	4/5/17	Scaffold	Oregon State University	SAMN05806092	GCA_001752665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/665/GCA_001752665.1_ASM175266v1	-	wPpe
alpha proteobacterium SCGC AAA028-D10	938641	PRJNA77225	77225	Proteobacteria	Alphaproteobacteria	0.925141	29.7	-	AZOF01	57	-	-	12/17/13	7/29/15	Scaffold	JGI	SAMN02597185	GCA_000510845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/510/845/GCA_000510845.1_ASM51084v1	-	SCGC AAA028-D10
alpha proteobacterium SCGC AAA023-L09	938615	PRJNA77227	77227	Proteobacteria	Alphaproteobacteria	0.774923	29.4	-	ATTD01	76	-	-	7/9/13	7/29/15	Contig	JGI	SAMN02441599	GCA_000419505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/505/GCA_000419505.1_ASM41950v1	-	SCGC AAA023-L09
actinobacterium SCGC AAA278-O22	932044	PRJNA77629	77629	Terrabacteria group	Actinobacteria	1.13849	47.6	-	AQUA01	43	-	-	4/19/13	7/29/15	Contig	JGI	SAMN02261280	GCA_000372185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/185/GCA_000372185.1_ASM37218v1	-	SCGC AAA278-O22
actinobacterium SCGC AAA278-I18	938557	PRJNA77631	77631	Terrabacteria group	Actinobacteria	0.944397	41.4	-	AQZH01	54	-	-	4/22/13	7/29/15	Scaffold	JGI	SAMN02261281	GCA_000378865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/865/GCA_000378865.1_ASM37886v1	-	SCGC AAA278-I18
actinobacterium SCGC AAA044-N04	932043	PRJNA77633	77633	Terrabacteria group	Actinobacteria	1.28666	45.6	-	AQZI01	23	-	-	4/22/13	7/29/15	Scaffold	JGI	SAMN02261282	GCA_000378885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/885/GCA_000378885.1_ASM37888v1	-	SCGC AAA044-N04
actinobacterium SCGC AAA028-A23	932036	PRJNA77735	77735	Terrabacteria group	Actinobacteria	0.833294	41.6	-	AQZJ01	64	-	-	4/22/13	7/29/15	Scaffold	JGI	SAMN02261283	GCA_000378905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/905/GCA_000378905.1_ASM37890v1	-	SCGC AAA028-A23
actinobacterium SCGC AAA027-J17	932040	PRJNA77745	77745	Terrabacteria group	Actinobacteria	0.966562	42.2	-	AQZK01	81	-	-	4/25/13	7/29/15	Scaffold	JGI	SAMN02261284	GCA_000383815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/815/GCA_000383815.1_ASM38381v1	-	SCGC AAA027-J17
actinobacterium SCGC AAA023-D18	932037	PRJNA77749	77749	Terrabacteria group	Actinobacteria	0.753259	39.6	-	AQZL01	67	-	-	4/22/13	7/29/15	Scaffold	JGI	SAMN02261285	GCA_000378925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/925/GCA_000378925.1_ASM37892v1	-	SCGC AAA023-D18
actinobacterium SCGC AAA023-J06	932038	PRJNA77811	77811	Terrabacteria group	Actinobacteria	0.695943	45.1	-	AQUB01	98	-	-	4/19/13	7/29/15	Contig	JGI	SAMN02261286	GCA_000372265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/265/GCA_000372265.1_ASM37226v1	-	SCGC AAA023-J06
alpha proteobacterium SCGC AAA288-E13	939316	PRJNA77817	77817	Proteobacteria	Alphaproteobacteria	0.812863	29	-	AZHQ01	106	-	-	12/9/13	7/29/15	Contig	JGI	SAMN02597171	GCA_000504605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/605/GCA_000504605.1_ASM50460v1	24451205	SCGC AAA288-E13
Bacillus bataviensis LMG 21833	1117379	PRJNA77725	77725	Terrabacteria group	Firmicutes	5.37114	39.6	-	AJLS01	197	5197	5069	10/23/12	6/15/17	Contig	University of Ghent	SAMN02471785	GCA_000307875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/875/GCA_000307875.1_BABA1.0	23087684	LMG 21833
Mycobacterium tuberculosis	1773	PRJNA335538	335538	Terrabacteria group	Actinobacteria	4.40663	65.6	chromosome:NZ_CP016794.1/CP016794.1	-	1	4301	4103	8/10/16	3/13/17	Complete Genome	Scientific Center for Anti-infectious Drugs (SCAID)	SAMN05447655	GCA_001702435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/702/435/GCA_001702435.1_ASM170243v1	-	SCAID 320.0
Candidatus Mycoplasma haemominutum 'Birmingham 1'	1116213	PRJNA76933	76933	Terrabacteria group	Tenericutes	0.51388	35.5	-	-	1	568	529	-	-	Scaffold	University of Bristol	SAMEA4532336	GCA_000319365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/365/GCA_000319365.1_ASM31936v1	-	Birmingham 1
Streptomyces acidiscabies 84-104	1116232	PRJNA77031	77031	Terrabacteria group	Actinobacteria	11.0059	70.6	-	AHBF01	244	9922	9223	1/13/12	5/19/17	Contig	University of Florida	SAMN02471769	GCA_000242715.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/715/GCA_000242715.2_ASM24271v2	22408247	84-104
alpha proteobacterium SCGC AAA240-E13	939306	PRJNA77845	77845	Proteobacteria	Alphaproteobacteria	1.4016	29	-	AZHR01	151	-	-	12/9/13	7/29/15	Contig	JGI	SAMN02597172	GCA_000504625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/625/GCA_000504625.1_ASM50462v1	24451205	SCGC AAA240-E13
alpha proteobacterium SCGC AAA300-J04	939390	PRJNA77873	77873	Proteobacteria	Alphaproteobacteria	0.621089	39.1	-	ARPB01	77	-	-	4/25/13	7/29/15	Contig	JGI	SAMN02261287	GCA_000382645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/645/GCA_000382645.1_ASM38264v1	-	SCGC AAA300-J04
Verrucomicrobia bacterium SCGC AAA300-K03	939909	PRJNA77877	77877	PVC group	Verrucomicrobia	1.23106	42.4	-	ARPC01	182	-	-	4/25/13	7/29/15	Contig	JGI	SAMN02261288	GCA_000382665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/665/GCA_000382665.1_ASM38266v1	-	SCGC AAA300-K03
Dietzia timorensis	499555	PRJNA345110	345110	Terrabacteria group	Actinobacteria	3.60789	65.6	chromosome:NZ_CP015961.1/CP015961.1	-	1	3321	3189	6/7/16	4/16/17	Complete Genome	Peking University	SAMN04219460	GCA_001659785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/785/GCA_001659785.1_ASM165978v1	-	ID05-A0528
Mycobacterium bovis	1765	PRJNA273066	273066	Terrabacteria group	Actinobacteria	4.34765	65.6	chromosome:NZ_CP015773.2/CP015773.2	-	1	4216	4029	5/19/16	4/5/17	Complete Genome	University of Sao Paulo	SAMN03288261	GCA_000934325.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/325/GCA_000934325.3_ASM93432v3	25999553	SP38
Verrucomicrobia bacterium SCGC AAA300-O17	939921	PRJNA77927	77927	PVC group	Verrucomicrobia	1.14755	42.6	-	ARPD01	203	-	-	4/25/13	7/29/15	Contig	JGI	SAMN02261289	GCA_000382685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/685/GCA_000382685.1_ASM38268v1	-	SCGC AAA300-O17
Planctomyces sp. SH-PL14	1632864	PRJNA277747	277747	PVC group	Planctomycetes	8.44277	65.6	chromosome:NZ_CP011270.1/CP011270.1	-	1	6476	6349	4/5/16	4/12/17	Complete Genome	NIOO-KNAW	SAMN03417854	GCA_001610835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/835/GCA_001610835.1_ASM161083v1	-	SH-PL14
Pseudoalteromonas citrea DSM 8771	1117314	PRJNA77675	77675	Proteobacteria	Gammaproteobacteria	5.32001	41.1	-	AHBZ02	223	4526	4334	12/15/11	4/17/17	Contig	Shandong University	SAMN02470923	GCA_000238375.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/375/GCA_000238375.3_Pcit_2.0	22535931	NCIMB 1889
Pseudoalteromonas marina DSM 17587	1117316	PRJNA77681	77681	Proteobacteria	Gammaproteobacteria	4.17459	39.6	-	AHCB02	69	3796	3686	12/15/11	1/17/15	Contig	Shandong University	SAMN02470928	GCA_000238335.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/335/GCA_000238335.3_Pman_2.0	22535931	mano4
Mycobacterium bovis BCG str. Tokyo 172	561275	PRJNA313242	313242	Terrabacteria group	Actinobacteria	4.37171	65.6	chromosome:NZ_CP014566.1/CP014566.1	-	1	4234	4039	3/7/16	4/5/17	Complete Genome	Thai Red Cross Society	SAMN04517448	GCA_001580385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/385/GCA_001580385.1_ASM158038v1	-	Tokyo 172 substr. TRCS
Mycobacterium microti	1806	PRJNA270004	270004	Terrabacteria group	Actinobacteria	4.37012	65.6	chromosome:CP010333.1	-	1	4369	4321	2/2/16	2/3/16	Complete Genome	"Beijing Institute of Genomics,Chinese Academy of Sciences"	SAMN03257090	GCA_001544815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/815/GCA_001544815.1_ASM154481v1	-	12
Mycobacterium africanum	33894	PRJNA270004	270004	Terrabacteria group	Actinobacteria	4.38642	65.6	chromosome:CP010334.1	-	1	4846	4798	2/2/16	2/3/16	Complete Genome	"Beijing Institute of Genomics,Chinese Academy of Sciences"	SAMN03257091	GCA_001544855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/855/GCA_001544855.1_ASM154485v1	-	25
Pseudoalteromonas undina DSM 6065	1117320	PRJNA77689	77689	Proteobacteria	Gammaproteobacteria	3.99843	39.9	-	AHCF02	49	3667	3532	12/15/11	4/17/17	Contig	Shandong University	SAMN02470920	GCA_000238275.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/275/GCA_000238275.3_Pund_2.0	22535931	NCIMB 2128
Pseudomonas extremaustralis	359110	PRJEB15798	347703	Proteobacteria	Gammaproteobacteria	6.67443	60.6	chromosome I:NZ_LT629689.1/LT629689.1	-	1	6192	5958	10/20/16	4/13/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216591	GCA_900102035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/035/GCA_900102035.1_IMG-taxon_2667527225_annotated_assembly	-	DSM 17835
Mycobacterium tuberculosis	1773	PRJNA270004	270004	Terrabacteria group	Actinobacteria	4.4219	65.6	chromosome:NZ_CP010330.1/CP010330.1	-	1	4304	4089	2/2/16	3/13/17	Complete Genome	"Beijing Institute of Genomics,Chinese Academy of Sciences"	SAMN03253058	GCA_001544705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/705/GCA_001544705.1_ASM154470v1	26704977	F28
Mycobacterium tuberculosis	1773	PRJNA270004	270004	Terrabacteria group	Actinobacteria	4.40183	65.6	chromosome:NZ_CP010337.1/CP010337.1	-	1	4294	3994	2/2/16	3/13/17	Complete Genome	"Beijing Institute of Genomics,Chinese Academy of Sciences"	SAMN03257094	GCA_001544955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/955/GCA_001544955.1_ASM154495v1	26704977	22115
Atlantibacter hermannii NBRC 105704	1115512	PRJDB14	77963	Proteobacteria	Gammaproteobacteria	4.49528	54.1	-	BAFF01	44	4265	4107	2/17/12	5/18/17	Contig	National Institute of Technology and Evaluation (NITE)	SAMD00041803	GCA_000248015.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/015/GCA_000248015.2_ASM24801v2	-	NBRC 105704
Escherichia vulneris NBRC 102420	1115515	PRJDB17	77969	Proteobacteria	Gammaproteobacteria	4.37458	56.4	-	BBMZ01	55	4268	4097	9/25/14	2/23/17	Contig	National Institute of Technology and Evaluation (NITE)	SAMD00018687	GCA_000759795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/795/GCA_000759795.1_ASM75979v1	-	NBRC 102420
Leisingera caerulea DSM 24564	999549	PRJNA77971	77971	Proteobacteria	Alphaproteobacteria	5.34442	63.3	-	AXBI01	9	5256	5074	9/30/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440718	GCA_000473325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/325/GCA_000473325.1_ASM47332v1	-	DSM 24564
Paenarthrobacter nitroguajacolicus JCM 14115	1303677	PRJDB934	243791	Terrabacteria group	Actinobacteria	5.13446	62.2	-	BBFS01	238	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016934	GCA_001313365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/365/GCA_001313365.1_ASM131336v1	-	JCM 14115
Carboxydothermus ferrireducens DSM 11255	1119529	PRJNA78189	78189	Terrabacteria group	Firmicutes	2.44199	41.9	-	ATYG01	49	2588	2462	7/15/13	4/17/17	Scaffold	JGI	SAMN02440594	GCA_000427565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/565/GCA_000427565.1_ASM42756v1	-	DSM 11255
Streptomyces coelicoflavus ZG0656	1120227	PRJNA78167	78167	Terrabacteria group	Actinobacteria	8.47831	71.8	-	AHGS01	1771	7872	6852	1/9/12	5/19/17	Contig	"Basic Medical College, Tianjin Medical University"	SAMN02471212	GCA_000241835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/835/GCA_000241835.2_ASM24183v2	22691180	ZG0656
Mycobacterium tuberculosis	1773	PRJNA270004	270004	Terrabacteria group	Actinobacteria	4.39942	65.6	chromosome:NZ_CP010339.1/CP010339.1	-	1	4273	3999	2/2/16	3/13/17	Complete Genome	"Beijing Institute of Genomics,Chinese Academy of Sciences"	SAMN03257096	GCA_001545015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/015/GCA_001545015.1_ASM154501v1	26704977	22103
Planktothrix agardhii NIVA-CYA 126/8	388467	PRJNA163669	163669	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.04587	39.5525	chromosome:NZ_CM002803.1/CM002803.1; plasmid pPA115:NZ_CM002804.1/CM002804.1; plasmid pPA14:NZ_CM002805.1/CM002805.1; plasmid pPA5.5:NZ_CM002806.1/CM002806.1; plasmid pPA50:NZ_CM002807.1/CM002807.1; plasmid pPA79:NZ_CM002808.1/CM002808.1	ASAK01	6	4510	4197	6/20/14	4/9/17	Chromosome	Institute for Limnology	SAMN02867752	GCA_000710505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/505/GCA_000710505.1_Plagard2.0	24907328	NIVA-CYA 126/8
Amycolatopsis thermoflava N1165	1068979	PRJNA78289	78289	Terrabacteria group	Actinobacteria	8.69347	71.6	-	AXBH01	2	8470	8152	9/30/13	4/17/17	Scaffold	JGI	SAMN02441454	GCA_000473265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/265/GCA_000473265.1_ASM47326v1	-	N1165
Amycolatopsis halophila YIM 93223	592678	PRJNA78293	78293	Terrabacteria group	Actinobacteria	5.5513	67.8	-	AZAK01	1	5091	4911	12/5/13	4/17/17	Scaffold	JGI	SAMN02597165	GCA_000504245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/245/GCA_000504245.1_ASM50424v1	-	YIM 93223
Sedimentitalea nanhaiensis DSM 24252	571166	PRJNA78295	78295	Proteobacteria	Alphaproteobacteria	4.94855	60.8	-	AXBG01	7	4825	4589	9/30/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440717	GCA_000473225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/225/GCA_000473225.1_ASM47322v1	-	DSM 24252
Mycobacterium bovis BCG	33892	PRJNA270004	270004	Terrabacteria group	Actinobacteria	4.35131	65.6	chromosome:CP010331.1	-	1	4826	4778	2/2/16	2/3/16	Complete Genome	"Beijing Institute of Genomics,Chinese Academy of Sciences"	SAMN03253093	GCA_001544735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/735/GCA_001544735.1_ASM154473v1	-	26
Prevotella baroniae DSM 16972 = JCM 13447	1122980	PRJNA195801	195801	FCB group	Bacteroidetes/Chlorobi group	3.12872	53	-	AUFQ01	47	2564	2430	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440845	GCA_000426585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/585/GCA_000426585.1_ASM42658v1	-	DSM 16972
Gordonia effusa NBRC 100432	1077974	PRJDA71849	71849	Terrabacteria group	Actinobacteria	4.70302	62.5	-	BAEH01	133	4446	4280	12/2/11	5/18/17	Contig	National Institute of Technology and Evaluation	SAMD00041782	GCA_000241305.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/305/GCA_000241305.2_ASM24130v2	-	NBRC 100432
Arthrobacter globiformis NBRC 12137	1077972	PRJDA71847	71847	Terrabacteria group	Actinobacteria	4.95441	66.2	-	BAEG01	125	4486	4245	12/2/11	5/18/17	Contig	National Institute of Technology and Evaluation	SAMD00041813	GCA_000238915.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/915/GCA_000238915.2_ASM23891v2	-	NBRC 12137
Actinomyces georgiae DSM 6843	1120942	PRJNA185530	185530	Terrabacteria group	Actinobacteria	2.49802	69.8	-	AUBM01	23	2136	2018	7/15/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441198	GCA_000429245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/245/GCA_000429245.1_ASM42924v1	-	DSM 6843
Actinomyces massiliensis 4401292	1167628	PRJNA127369	127369	Terrabacteria group	Actinobacteria	3.37103	67.6	-	AKIO01	13	2802	2697	6/18/12	4/7/17	Scaffold	URMITE	SAMN02469892	GCA_000269805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/805/GCA_000269805.1_ASM26980v1	22933754	4401292
Mycobacterium bovis	1765	PRJNA270004	270004	Terrabacteria group	Actinobacteria	4.33623	65.6	chromosome:CP010332.1	-	1	4244	4196	2/2/16	2/3/16	Complete Genome	"Beijing Institute of Genomics,Chinese Academy of Sciences"	SAMN03257089	GCA_001544775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/775/GCA_001544775.1_ASM154477v1	-	30
Treponema socranskii subsp. paredis ATCC 35535	1125701	PRJNA169492	169492	Spirochaetes	Spirochaetia	2.74215	48.3	-	ATFD01	2	2533	2439	6/19/13	4/8/17	Scaffold	Broad Institute	SAMN02596985	GCA_000413015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/015/GCA_000413015.1_Trep_socr_subsp_paredis_ATCC_35535_V1	-	ATCC 35535
Actinopolyspora mortivallis DSM 44261	1050202	PRJNA78921	78921	Terrabacteria group	Actinobacteria	4.23335	68.8	-	AQZN01	1	3887	3740	4/22/13	4/17/17	Scaffold	JGI	SAMN02261292	GCA_000384035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/035/GCA_000384035.1_ASM38403v1	-	HS-1
Corynebacterium pyruviciproducens ATCC BAA-1742	1125779	PRJNA78965	78965	Terrabacteria group	Actinobacteria	2.72297	61.1	-	ATBY01	3	2446	2311	6/13/13	4/17/17	Scaffold	Broad Institute	SAMN02596973	GCA_000411375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/375/GCA_000411375.1_Cory_pyru_17730_V1	-	ATCC BAA-1742
Aquimarina agarivorans	980584	PRJNA67451	67451	FCB group	Bacteroidetes/Chlorobi group	4.07388	33.2	-	AFPB01	183	3497	3266	6/14/11	8/21/17	Contig	Shandong University at Weihai	SAMN02470930	GCA_000218485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/485/GCA_000218485.2_ASM21848v2	21725015	HQM9
Pseudomonas oleovorans MOIL14HWK12	1033992	PRJNA79065	79065	Proteobacteria	Gammaproteobacteria	5.00589	66.3	-	AZOB01	12	4611	4526	12/17/13	4/9/17	Scaffold	JGI	SAMN02597181	GCA_000510765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/510/765/GCA_000510765.1_ASM51076v1	-	MOIL14HWK12
Gordonia otitidis NBRC 100426	1108044	PRJDB3	76513	Terrabacteria group	Actinobacteria	5.29589	65.4	-	BAFB01	273	4927	4517	2/17/12	5/18/17	Contig	National Institute of Technology and Evaluation (NITE)	SAMD00041778	GCA_000248075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/075/GCA_000248075.2_ASM24807v2	-	NBRC 100426
Gordonia rhizosphera NBRC 16068	1108045	PRJDB4	76515	Terrabacteria group	Actinobacteria	6.43499	67	-	BAHC01	261	5908	5567	8/30/12	5/18/17	Contig	National Institute of Technology and Evaluation (NITE)	SAMD00041828	GCA_000298195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/195/GCA_000298195.1_ASM29819v1	-	NBRC 16068
Weissella confusa	1583	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.2183	44.8	-	JQAY01	40	2086	1990	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02797800	GCA_001436895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/895/GCA_001436895.1_ASM143689v1	26415554	DSM 20196
Mycobacterium tuberculosis	1773	PRJNA270004	270004	Terrabacteria group	Actinobacteria	4.42862	65.6	chromosome:CP010329.1	-	1	4366	4318	2/2/16	2/3/16	Complete Genome	"Beijing Institute of Genomics,Chinese Academy of Sciences"	SAMN03253054	GCA_001544675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/675/GCA_001544675.1_ASM154467v1	-	F1
Mycobacterium tuberculosis	1773	PRJNA270004	270004	Terrabacteria group	Actinobacteria	4.41984	65.6	chromosome:CP010335.1	-	1	4512	4464	2/2/16	2/3/16	Complete Genome	"Beijing Institute of Genomics,Chinese Academy of Sciences"	SAMN03257092	GCA_001544895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/895/GCA_001544895.1_ASM154489v1	-	2242
Mycobacterium tuberculosis	1773	PRJNA270004	270004	Terrabacteria group	Actinobacteria	4.40503	65.6	chromosome:CP010336.1	-	1	4647	4599	2/2/16	2/3/16	Complete Genome	"Beijing Institute of Genomics,Chinese Academy of Sciences"	SAMN03257093	GCA_001544935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/935/GCA_001544935.1_ASM154493v1	-	2279
Mycobacterium tuberculosis	1773	PRJNA270004	270004	Terrabacteria group	Actinobacteria	4.41709	65.6	chromosome:CP010338.1	-	1	4277	4229	2/2/16	2/3/16	Complete Genome	"Beijing Institute of Genomics,Chinese Academy of Sciences"	SAMN03257095	GCA_001544985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/985/GCA_001544985.1_ASM154498v1	-	37004
Lachnoanaerobaculum sp. ICM7	936594	PRJNA78559	78559	Terrabacteria group	Firmicutes	2.77996	36	-	ALJL01	38	2630	2478	8/13/12	4/17/17	Contig	J. Craig Venter Institute	SAMN00828783	GCA_000287675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/675/GCA_000287675.1_LspICM7v1.0	-	ICM7
SAR86 cluster bacterium SAR86D	1123865	PRJNA79367	79367	Proteobacteria	Gammaproteobacteria	0.920921	34.3	-	AHBJ01	194	-	-	2/28/12	7/28/15	Scaffold	J. Craig Venter Institute	SAMN02436216	GCA_000252585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/585/GCA_000252585.1_SAR86D_single_cell_1.0	22170421	-
Prevotella saccharolytica JCM 17484	1236516	PRJDB604	243179	FCB group	Bacteroidetes/Chlorobi group	2.97551	43.3	-	BAKN01	82	2442	1953	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00006087	GCA_000614205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/205/GCA_000614205.1_ASM61420v1	-	JCM 17484
Mycobacterium tuberculosis	1773	PRJNA270004	270004	Terrabacteria group	Actinobacteria	4.42649	65.6	chromosome:CP010340.1	-	1	4245	4197	2/2/16	2/3/16	Complete Genome	"Beijing Institute of Genomics,Chinese Academy of Sciences"	SAMN03257097	GCA_001545055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/055/GCA_001545055.1_ASM154505v1	-	26105
Alishewanella jeotgali KCTC 22429	1129374	PRJNA80431	80431	Proteobacteria	Gammaproteobacteria	3.83136	50.7	-	AHTH01	65	3610	3444	2/3/12	4/17/17	Contig	"Department of Environmental Science and Ecological Engineering, Korea University"	SAMN02470203	GCA_000245735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/735/GCA_000245735.2_ASM24573v2	22461542	KCTC 22429
Mycobacterium bovis	1765	PRJNA306822	306822	Terrabacteria group	Actinobacteria	4.37071	65.6	chromosome:NZ_CP013741.1/CP013741.1	-	1	4236	4039	1/4/16	4/5/17	Complete Genome	"Microgen, Federal State Scientific-Industrial Company for Immunobiological Medicines of the Ministry of Health and Social Development of the Russian Federation"	SAMN04364424	GCA_001483905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/483/905/GCA_001483905.1_ASM148390v1	27034492	BCG-1 (Russia)
Mycobacterium tuberculosis	1773	PRJNA291131	291131	Terrabacteria group	Actinobacteria	4.41183	65.6	chromosome:NZ_CP012506.2/CP012506.2	-	1	4285	4090	8/31/15	3/13/17	Complete Genome	Scientific Center for Anti-infectious Drugs (SCAID)	SAMN03921880	GCA_001275565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/565/GCA_001275565.2_ASM127556v2	26543112	SCAID 187.0
Lactobacillus parafarraginis DSM 18390 = JCM 14109	1423786	PRJDB773	243685	Terrabacteria group	Firmicutes	3.10182	45.2	-	BBAR01	236	3054	2215	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00000440	GCA_001311355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/355/GCA_001311355.1_ASM131135v1	-	JCM 14109
Mycobacterium bovis BCG	33892	PRJNA256163	256163	Terrabacteria group	Actinobacteria	4.37014	65.6	chromosome:NZ_CP009243.1/CP009243.1	-	1	4233	4035	8/26/15	7/10/17	Complete Genome	N.F.Gamaleya Institute for Epidemiology and Microbiology	SAMN02940916	GCA_001274555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/274/555/GCA_001274555.1_ASM127455v1	-	Russia 368
Mycobacterium tuberculosis W-148	659019	PRJNA39283	39283	Terrabacteria group	Actinobacteria	4.41855	65.6	chromosome:NZ_CP012090.1/CP012090.1	-	1	4291	4103	8/19/15	3/11/17	Complete Genome	Broad Institute	SAMN02595346	GCA_000193185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/185/GCA_000193185.2_ASM19318v2	-	W-148
Mycobacterium bovis	1765	PRJNA285833	285833	Terrabacteria group	Actinobacteria	4.35171	65.6	chromosome:NZ_CP012095.1/CP012095.1	-	1	4220	4026	7/17/15	4/10/17	Complete Genome	Animal and Plant Quarantine Agency	SAMN03761171	GCA_001078615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/615/GCA_001078615.1_ASM107861v1	26430042	1595
Candidatus Photodesmus katoptron Akat1	1236703	PRJNA80863	80863	Proteobacteria	Gammaproteobacteria	1.01592	31.0587	plasmid pPK001:NZ_AMSD01000003.1/AMSD01000003.1	AMSD01	9	933	838	6/17/13	4/9/17	Contig	University of Michigan	SAMN02471885	GCA_000478685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/685/GCA_000478685.1_ASM47868v1	24118864	Akat1
Bacillus vireti	220686	PRJNA284208	284208	Terrabacteria group	Firmicutes	5.30909	39.8	-	LDNB01	27	5204	4973	6/10/15	4/10/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN03699822	GCA_001026695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/695/GCA_001026695.1_ASM102669v1	26251494	DSM 15602
Halococcus hamelinensis 100A6	1132509	PRJNA174896	174896	Euryarchaeota	Halobacteria	3.41907	65.4	-	AOMB01	46	3451	3312	2/4/13	3/29/17	Contig	"University of California, Davis"	SAMN02471661	GCA_000336675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/675/GCA_000336675.1_ASM33667v1	25393412	100A6
Paenibacillus dendritiformis C454	1131935	PRJNA80855	80855	Terrabacteria group	Firmicutes	6.37596	54.1	-	AHKH01	199	5745	5538	2/1/12	5/19/17	Contig	Tauber Family Foundation	SAMN02471037	GCA_000245555.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/555/GCA_000245555.2_PdendC454	22461558	C454
Mycobacterium bovis BCG	33892	PRJNA251957	251957	Terrabacteria group	Actinobacteria	4.41043	65.6	chromosome:NZ_CP008744.1/CP008744.1	-	1	4268	4070	6/30/15	4/3/17	Complete Genome	"Huazhong Agriculture University, Life Science and technology academy"	SAMN02864173	GCA_001043255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/255/GCA_001043255.1_ASM104325v1	-	3281
Pseudomonas aeruginosa	287	PRJNA281807	281807	Proteobacteria	Gammaproteobacteria	7.49759	65.6	chromosome:NZ_CP011317.1/CP011317.1	-	1	7313	7061	4/29/15	3/17/17	Complete Genome	Maasstad Hospital	SAMN03389320	GCA_000981825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/825/GCA_000981825.1_ASM98182v1	-	Carb01 63
Mycobacterium tuberculosis	1773	PRJNA269967	269967	Terrabacteria group	Actinobacteria	4.41122	65.6	chromosome:CP010873.1	-	1	4170	3829	3/17/15	8/20/15	Complete Genome	Universidad Nacional de Colombia - Sede Bogota	SAMN03258416	GCA_000954155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/954/155/GCA_000954155.1_ASM95415v1	-	Beijing-like
Gordonia rubripertincta NBRC 101908	1077975	PRJDA71851	71851	Terrabacteria group	Actinobacteria	5.20423	67.4	-	BAHB01	134	4792	4571	8/30/12	5/18/17	Contig	National Institute of Technology and Evaluation	SAMD00041793	GCA_000327325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/325/GCA_000327325.1_ASM32732v1	-	NBRC 101908
Amycolatopsis balhimycina FH 1894	1089545	PRJNA165347	165347	Terrabacteria group	Actinobacteria	10.8585	70.8	-	ARBH01	1	9825	9363	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02256403	GCA_000384295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/295/GCA_000384295.1_ASM38429v1	-	DSM 44591
Mycobacterium tuberculosis H37RvSiena	1437856	PRJNA232612	232612	Terrabacteria group	Actinobacteria	4.41091	65.6	chromosome:NZ_CP007027.1/CP007027.1	-	1	4285	4152	1/21/15	6/23/17	Complete Genome	University of Siena	SAMN03287041	GCA_000827085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/827/085/GCA_000827085.1_ASM82708v1	27819398	H37RvSiena
Senegalimassilia anaerobia JC110	1034345	PRJEA70543	70543	Terrabacteria group	Actinobacteria	2.39802	61.8	-	CAEM01	30	1976	1864	11/20/11	4/7/17	Scaffold	laboratoire URMITE CNRS 6236	SAMEA2272806	GCA_000236865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/865/GCA_000236865.1_ASM23686v1	-	type strain: JC110
Mycobacterium tuberculosis str. Kurono	1445606	PRJDB1582	271185	Terrabacteria group	Actinobacteria	4.41508	65.6	chromosome:NZ_AP014573.1/AP014573.1	-	1	4291	4127	12/23/14	3/11/17	Complete Genome	National Center for Global Health and Medicine	SAMD00000334	GCA_000828995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/995/GCA_000828995.1_ASM82899v1	25458614	Kurono
Mobilicoccus pelagius NBRC 104925	1089455	PRJDA73367	73367	Terrabacteria group	Actinobacteria	3.54492	71.9	-	BAFE01	97	3108	2953	2/17/12	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00041798	GCA_000247995.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/995/GCA_000247995.2_ASM24799v2	-	NBRC 104925
Mycobacterium tuberculosis 49-02	1427516	PRJEB4916	266114	Terrabacteria group	Actinobacteria	4.41238	65.6	chromosome I:NZ_HG813240.1/HG813240.1	-	1	4285	4111	11/3/14	3/11/17	Complete Genome	JLU	SAMEA3865285	GCA_000786505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/505/GCA_000786505.1_MT49-02	-	49-02
Nitrolancea hollandica Lb	1129897	PRJEA78953	78953	Terrabacteria group	Chloroflexi	3.8881	62.6	-	CAGS01	736	3877	3361	5/30/12	4/17/17	Contig	CEA IG Genoscope	SAMEA2272167	GCA_000297255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/255/GCA_000297255.1_ASM29725v1	"2,276,364,924,573,160"	Lb
Thioalkalivibrio thiocyanodenitrificans ARhD 1	713586	PRJNA81091	81091	Proteobacteria	Gammaproteobacteria	3.74665	64.8	-	AQZO01	3	3592	3450	4/22/13	4/17/17	Scaffold	JGI	SAMN02261294	GCA_000378965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/965/GCA_000378965.1_ASM37896v1	-	ARhD 1
Chitinophaga ginsengisegetis	393003	PRJEB19722	377515	FCB group	Bacteroidetes/Chlorobi group	7.93494	46.6	-	FUZZ01	9	6443	6304	3/9/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660461	GCA_900168065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/065/GCA_900168065.1_IMG-taxon_2595698247_annotated_assembly	-	DSM 18108
Lactobacillus vini DSM 20605	1133569	PRJNA81013	81013	Terrabacteria group	Firmicutes	2.19571	37.6	-	AHYZ01	220	2174	1998	3/20/12	4/8/17	Contig	Universidade Federal do Rio de Janeiro	SAMN02471380	GCA_000255495.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/495/GCA_000255495.2_ASM25549v2	22582376	DSM 20605
Mycobacterium bovis	1765	PRJNA260835	260835	Terrabacteria group	Actinobacteria	4.35809	65.6	chromosome:NZ_CP009449.1/CP009449.1	-	1	4240	4001	9/26/14	4/2/17	Complete Genome	BEI Resources/American Type	SAMN03067437	GCA_000758245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/245/GCA_000758245.1_ASM75824v1	-	ATCC BAA-935
Streptomyces somaliensis DSM 40738	1134445	PRJNA81125	81125	Terrabacteria group	Actinobacteria	5.1769	74.1	-	AJJM01	243	4715	4376	4/12/12	5/19/17	Contig	"Strathclyde Institute of Pharmacy and Biomedical Sciences, University of Strathclyde"	SAMN02471954	GCA_000258595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/595/GCA_000258595.1_Ssomaliensis1	22689234	DSM 40738
Mycobacterium tuberculosis H37Rv	83332	PRJNA260834	260834	Terrabacteria group	Actinobacteria	4.39612	65.6	chromosome:NZ_CP009480.1/CP009480.1	-	1	4283	4099	9/26/14	3/11/17	Complete Genome	BEI Resources/American Type	SAMN03067436	GCA_000831245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/245/GCA_000831245.1_ASM83124v1	-	H37Rv; TMC 102
Leucothrix mucor DSM 2157	998674	PRJNA81139	81139	Proteobacteria	Gammaproteobacteria	5.18567	47.8	-	ATTE01	2	4708	4590	7/9/13	4/17/17	Contig	JGI	SAMN02440559	GCA_000419525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/525/GCA_000419525.1_ASM41952v1	-	DSM 2157
Methanolobus tindarius DSM 2278	1090322	PRJNA81435	81435	Euryarchaeota	Methanomicrobia	3.15188	39.8	-	AZAJ01	1	2970	2886	12/5/13	4/17/17	Contig	JGI	SAMN02597164	GCA_000504205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/205/GCA_000504205.1_ASM50420v1	-	DSM 2278
Pseudophaeobacter arcticus DSM 23566	999550	PRJNA81437	81437	Proteobacteria	Alphaproteobacteria	5.04923	59.3	-	AXBF01	6	4829	4660	9/30/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441118	GCA_000473205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/205/GCA_000473205.1_ASM47320v1	-	DSM 23566
Mycobacterium tuberculosis	1773	PRJNA253748	253748	Terrabacteria group	Actinobacteria	4.37938	65.6	chromosome:NZ_CP009426.1/CP009426.1	-	1	4269	4077	9/22/14	3/11/17	Complete Genome	Northern Arizona University	SAMN02887314	GCA_000756525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/525/GCA_000756525.1_ASM75652v1	25395630	96075
Cohnella panacarvi Gsoil 349	979226	PRJNA81617	81617	Terrabacteria group	Firmicutes	4.77283	54.5	-	AZXQ01	1	4447	4316	1/3/14	4/17/17	Scaffold	JGI	SAMN02597273	GCA_000515335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/335/GCA_000515335.1_ASM51533v1	-	Gsoil 349
Methylocystis parvus OBBP	1134912	PRJNA81429	81429	Proteobacteria	Alphaproteobacteria	4.47591	63.4	-	AJTV01	108	4357	4160	7/31/12	5/19/17	Contig	CIB-CSIC	SAMN02469457	GCA_000283235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/235/GCA_000283235.1_MetPar_1.0	23012286	OBBP
Leisingera aquimarina DSM 24565	999611	PRJNA81653	81653	Proteobacteria	Alphaproteobacteria	5.34425	61.4	-	AXBE01	8	5101	4774	9/30/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441453	GCA_000473165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/165/GCA_000473165.1_ASM47316v1	-	DSM 24565
Bartonella koehlerae C-29	1134510	PRJNA81695	81695	Proteobacteria	Alphaproteobacteria	1.74711	37.6	-	AHPL01	3	1504	1324	6/12/14	4/17/17	Scaffold	Broad Institute	SAMN00778953	GCA_000706625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/625/GCA_000706625.1_Bart_koeh_C29_V1	-	C-29
Vibrio cyclitrophicus FF274	1136165	PRJNA81875	81875	Proteobacteria	Gammaproteobacteria	5.1509	43.5	-	AIDG01	138	4593	4401	3/26/12	5/19/17	Scaffold	Massachusetts Institute of Technology	SAMN02470481	GCA_000256245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/245/GCA_000256245.1_Vibcyclo-FF-274_1.0	22491847	FF274
Amycolatopsis benzoatilytica AK 16/65	1089544	PRJNA81939	81939	Terrabacteria group	Actinobacteria	8.70427	70	-	ARPK01	1	8016	7802	4/25/13	4/17/17	Scaffold	JGI	SAMN02261299	GCA_000383915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/915/GCA_000383915.1_ASM38391v1	-	AK 16/65
Thermicanus aegyptius DSM 12793	1089548	PRJNA81927	81927	Terrabacteria group	Firmicutes	3.65762	48.2	-	AZNU01	1	3618	3452	12/17/13	4/17/17	Scaffold	JGI	SAMN02597174	GCA_000510645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/510/645/GCA_000510645.1_ASM51064v1	-	DSM 12793
Rudanella lutea DSM 19387	1089547	PRJNA81941	81941	FCB group	Bacteroidetes/Chlorobi group	6.54604	54.3	-	ARPG01	4	5231	5131	4/25/13	4/17/17	Scaffold	JGI	SAMN02261300	GCA_000383955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/955/GCA_000383955.1_ASM38395v1	-	DSM 19387
Mycobacterium pseudoshottsii L15	1136880	PRJDB4345	306937	Terrabacteria group	Actinobacteria	5.9409	65.7	-	BCND01	247	5333	4597	12/19/15	5/22/17	Scaffold	"Waseda University, Research Organization for Nano and life Innovation"	SAMD00042842	GCA_001515365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/365/GCA_001515365.1_ASM151536v1	26868383	JCM 15466
Mycobacterium tuberculosis	1773	PRJNA253748	253748	Terrabacteria group	Actinobacteria	4.41094	65.6	chromosome:NZ_CP009427.1/CP009427.1	-	1	4283	4068	9/22/14	3/10/17	Complete Genome	Northern Arizona University	SAMN02874015	GCA_000756545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/545/GCA_000756545.1_ASM75654v1	25395630	96121
Mycobacterium tuberculosis	1773	PRJNA256478	256478	Terrabacteria group	Actinobacteria	4.41151	65.6	chromosome:NZ_CP009100.1/CP009100.1	-	1	4276	4082	8/7/14	3/11/17	Complete Genome	Affliated Hospital of Zunyi Medical College	SAMN02943514	GCA_000738445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/445/GCA_000738445.1_ASM73844v1	25237021	ZMC13-264
alpha proteobacterium SCGC AAA280-P20	938665	PRJNA82095	82095	Proteobacteria	Alphaproteobacteria	0.720523	29.6	-	AQUE01	65	-	-	4/19/13	7/29/15	Contig	JGI	SAMN02261301	GCA_000371845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/845/GCA_000371845.1_ASM37184v1	-	SCGC AAA280-P20
alpha proteobacterium SCGC AAA027-J10	938631	PRJNA82097	82097	Proteobacteria	Alphaproteobacteria	0.79298	29.8	-	AQUF01	82	-	-	4/19/13	7/29/15	Contig	JGI	SAMN02261302	GCA_000371825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/825/GCA_000371825.1_ASM37182v1	-	SCGC AAA027-J10
alpha proteobacterium SCGC AAA027-L15	938633	PRJNA82099	82099	Proteobacteria	Alphaproteobacteria	0.719587	29.4	-	AQUG01	56	-	-	4/19/13	7/29/15	Contig	JGI	SAMN02261303	GCA_000371865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/865/GCA_000371865.1_ASM37186v1	-	SCGC AAA027-L15
Enorma massiliensis phI	1118060	PRJEA82083	82083	Terrabacteria group	Actinobacteria	2.2805	61.9	-	CAGZ01	3	1927	1797	5/30/12	4/8/17	Scaffold	URMITE CNRS UMR 6236 IRD 198	SAMEA2272149	GCA_000311845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/845/GCA_000311845.1_ASM31184v1	-	-
Alistipes obesi	1118061	PRJEA82085	82085	FCB group	Bacteroidetes/Chlorobi group	3.16368	58.4	-	CAHA01	4	2676	2543	5/30/12	4/8/17	Scaffold	URMITE CNRS UMR 6236 IRD 198	SAMEA2272762	GCA_000311925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/925/GCA_000311925.1_ASM31192v1	-	-
alpha proteobacterium SCGC AAA280-B11	938663	PRJNA82173	82173	Proteobacteria	Alphaproteobacteria	0.67425	29.8	-	AQUH01	47	-	-	4/19/13	7/29/15	Contig	JGI	SAMN02261304	GCA_000371745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/745/GCA_000371745.1_ASM37174v1	-	SCGC AAA280-B11
Actinopolyspora halophila DSM 43834	1089546	PRJNA82187	82187	Terrabacteria group	Actinobacteria	5.35329	68	-	AQUI01	2	4865	4684	4/19/13	5/18/17	Contig	JGI	SAMN02261305	GCA_000371785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/785/GCA_000371785.1_ASM37178v1	-	DSM 43834
Gordonia sputi NBRC 100414	1089453	PRJDA73363	73363	Terrabacteria group	Actinobacteria	4.95298	65.3	-	BAFC01	158	4547	4282	2/17/12	5/18/17	Contig	National Institute of Technology and Evaluation	SAMD00041776	GCA_000248055.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/055/GCA_000248055.2_ASM24805v2	-	NBRC 100414
Mycobacterium tuberculosis	1773	PRJNA256478	256478	Terrabacteria group	Actinobacteria	4.41151	65.6	chromosome:NZ_CP009101.1/CP009101.1	-	1	4278	4086	8/7/14	3/11/17	Complete Genome	Affliated Hospital of Zunyi Medical College	SAMN02943515	GCA_000738475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/475/GCA_000738475.1_ASM73847v1	25237021	ZMC13-88
Lactobacillus kisonensis F0435	797516	PRJNA49693	49693	Terrabacteria group	Firmicutes	2.98706	41.6	-	AGRJ01	86	2863	2496	1/10/12	4/7/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN02299436	GCA_000242275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/275/GCA_000242275.1_ASM24227v1	-	F0435
Mycobacterium tuberculosis	1773	PRJNA246436	246436	Terrabacteria group	Actinobacteria	4.41079	65.6	chromosome:NZ_CP007809.1/CP007809.1	-	1	4285	4070	6/13/14	3/8/17	Complete Genome	Korean Institute of Tuberculosis	SAMN02767600	GCA_000706665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/665/GCA_000706665.1_ASM70666v1	25359915	KIT87190
Verrucomicrobia bacterium SCGC AAA164-A21	1009695	PRJEA82353	82353	PVC group	Verrucomicrobia	1.01144	46.7	-	CAGK02	754	-	-	4/13/12	4/29/14	Scaffold	Los Alamos National Laboratory	SAMEA2272220	GCA_000264585.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/585/GCA_000264585.3_ASM26458v3	22536372	SCGC AAA164-A21
Verrucomicrobia bacterium SCGC AAA164-L15	1009417	PRJEA82355	82355	PVC group	Verrucomicrobia	2.64141	48.3	-	CAGL02	710	2309	1727	4/13/12	4/17/17	Scaffold	Los Alamos National Laboratory	SAMEA2272746	GCA_000285795.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/795/GCA_000285795.3_ASM28579v3	22536372	SCGC AAA164-L15
Verrucomicrobia bacterium SCGC AAA164-O14	1009420	PRJEA82357	82357	PVC group	Verrucomicrobia	3.34646	48.3	-	CAGM02	1141	2867	2083	4/13/12	4/17/17	Scaffold	Los Alamos National Laboratory	SAMEA2272694	GCA_000264605.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/605/GCA_000264605.3_ASM26460v3	22536372	SCGC AAA164-O14
Verrucomicrobia bacterium SCGC AAA168-E21	1009422	PRJEA82359	82359	PVC group	Verrucomicrobia	2.06056	47.8	-	CAGN02	1084	-	-	4/13/12	4/29/14	Scaffold	Los Alamos National Laboratory	SAMEA2272309	GCA_000264625.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/625/GCA_000264625.3_ASM26462v3	22536372	SCGC AAA168-E21
Verrucomicrobia bacterium SCGC AAA168-F10	1009423	PRJEA82361	82361	PVC group	Verrucomicrobia	4.85004	46.3	-	CAGO02	1397	4143	3235	4/13/12	4/17/17	Scaffold	Los Alamos National Laboratory	SAMEA2272797	GCA_000264645.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/645/GCA_000264645.3_ASM26464v3	22536372	SCGC AAA168-F10
Enterococcus dispar ATCC 51266	1139219	PRJNA82531	82531	Terrabacteria group	Firmicutes	2.82223	37.2	-	AHYR01	3	2698	2594	5/31/13	4/8/17	Scaffold	Broad Institute	SAMN02596962	GCA_000406945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/945/GCA_000406945.1_Ente_disp_ATCC51266_V1	-	ATCC 51266
Enterococcus cecorum	44008	PRJNA268097	268097	Terrabacteria group	Firmicutes	2.3206	36.4	chromosome:NZ_CP010064.1/CP010064.1	-	1	2398	2134	10/16/15	4/4/17	Chromosome	NC State University	SAMN03203014	GCA_001318405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/405/GCA_001318405.1_ASM131840v1	25860249	SA3
Mycobacterium tuberculosis K	1249615	PRJNA178919	178919	Terrabacteria group	Actinobacteria	4.38552	65.6	chromosome:NZ_CP007803.1/CP007803.1	-	1	4264	4086	6/5/14	3/8/17	Complete Genome	Seoul National University	SAMN02803802	GCA_000698475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/475/GCA_000698475.1_ASM69847v1	26473025	K
Enterococcus avium ATCC 14025	1140002	PRJNA82539	82539	Terrabacteria group	Firmicutes	4.65541	39.1	-	AHYV01	13	4567	4400	5/31/13	4/8/17	Scaffold	Broad Institute	SAMN02596897	GCA_000406965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/965/GCA_000406965.1_Ente_aviu_ATCC14025_V1	-	ATCC 14025
Enterococcus columbae DSM 7374 = ATCC 51263	1121865	PRJNA82541	82541	Terrabacteria group	Firmicutes	2.58304	36.6	-	AHYW01	7	2420	2299	5/31/13	4/8/17	Scaffold	Broad Institute	SAMN02596961	GCA_000406925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/925/GCA_000406925.1_Ente_colu_ATCC51263_V1	-	ATCC 51263
Bacillus azotoformans LMG 9581	1131731	PRJNA80827	80827	Terrabacteria group	Firmicutes	4.22325	37.2	-	AJLR01	169	4222	4121	10/23/12	6/15/17	Contig	University of Ghent	SAMN02471786	GCA_000307855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/855/GCA_000307855.1_BAZO1.0	23087684	LMG 9581
Enterococcus sulfureus ATCC 49903	1140003	PRJNA191891	191891	Terrabacteria group	Firmicutes	2.30165	37.9	-	ASWO01	8	2267	2159	5/31/13	4/8/17	Contig	Broad Institute	SAMN02596964	GCA_000407605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/605/GCA_000407605.1_Ente_sulf_ATCC49903_V2	-	ATCC 49903
uncultured marine group II euryarchaeote	274854	PRJNA77705	77705	Euryarchaeota	unclassified Euryarchaeota	2.06414	51.55	chromosome:CM001443.1	AHCG01	11	1828	1781	2/3/12	8/12/14	Chromosome	"School of Oceanography, University of Washington"	SAMN02954313	GCA_000246735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/735/GCA_000246735.1_ASM24673v1	22301318	-
Staphylococcus delphini 8086	1141105	PRJEA87011	87011	Terrabacteria group	Firmicutes	2.50821	38.3	-	CAIA01	211	2399	2315	6/1/12	4/17/17	Contig	University of Edinburgh	SAMEA2272298	GCA_000308115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/115/GCA_000308115.1_ASM30811v1	-	8086
Staphylococcus intermedius NCTC 11048	1141106	PRJEA87009	87009	Terrabacteria group	Firmicutes	2.73713	37.3	-	CAIB01	286	2646	2530	6/1/12	4/8/17	Contig	University of Edinburgh	SAMEA2272193	GCA_000308095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/095/GCA_000308095.1_ASM30809v1	-	NCTC 11048
Providencia sneebia DSM 19967	1141660	PRJNA82569	82569	Proteobacteria	Gammaproteobacteria	3.89612	39.0669	chromosome:NZ_CM001773.1/CM001773.1; plasmid pPSN1:NZ_CM001853.1/CM001853.1; plasmid pPSN2:NZ_CM001854.1/CM001854.1; plasmid pPSN3:NZ_CM001855.1/CM001855.1	AKKN01	4	3263	3015	11/13/12	4/17/17	Chromosome	Cornell University	SAMN02428955	GCA_000314895.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/895/GCA_000314895.2_ASM31489v2	23145767	DSM 19967
Providencia burhodogranariea DSM 19968	1141662	PRJNA82573	82573	Proteobacteria	Gammaproteobacteria	4.57945	39.1	-	AKKL01	8	3975	3798	11/13/12	4/17/17	Scaffold	Cornell University	SAMN02428957	GCA_000314855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/855/GCA_000314855.2_ASM31485v2	23145767	DSM 19968
Methanocaldococcus villosus KIN24-T80	1069083	PRJNA82617	82617	Euryarchaeota	Methanococci	1.24938	29.5	-	AQUK01	2	1408	1346	4/19/13	4/8/17	Contig	JGI	SAMN02261307	GCA_000371805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/805/GCA_000371805.1_ASM37180v1	-	KIN24-T80
Desulfonatronum lacustre DSM 10312	935942	PRJNA82813	82813	Proteobacteria	delta/epsilon subdivisions	3.76145	59.3	-	JAFE01	1	3407	3303	1/10/14	4/17/17	Scaffold	JGI	SAMN02584911	GCA_000519265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/265/GCA_000519265.1_ASM51926v1	-	DSM 10312
Nitratiruptor tergarcus DSM 16512	1069081	PRJEB20244	381571	Proteobacteria	delta/epsilon subdivisions	1.92943	36.9	-	FWWZ01	2	2011	1935	4/6/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660197	GCA_900176045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/045/GCA_900176045.1_IMG-taxon_2516493030_annotated_assembly	-	DSM 16512
Pseudomonas knackmussii B13	1301098	PRJEB1565	246169	Proteobacteria	Gammaproteobacteria	6.16291	65.6	chromosome I:NZ_HG322950.1/HG322950.1	-	1	5770	5559	5/7/14	4/17/17	Complete Genome	CHUV-UNIL	SAMEA3139009	GCA_000689415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/415/GCA_000689415.1_PKB13	-	B13
Methylobacter luteus IMV-B-3098	1095552	PRJNA82927	82927	Proteobacteria	Gammaproteobacteria	5.02914	51.1	-	ATYJ01	4	4543	4317	7/15/13	4/8/17	Scaffold	JGI	SAMN02441220	GCA_000427625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/625/GCA_000427625.1_ASM42762v1	-	IMV-B-3098
Mycobacterium tuberculosis HKBS1	1010834	PRJNA66061	66061	Terrabacteria group	Actinobacteria	4.40793	65.6	chromosome:NZ_CP002871.1/CP002871.1	-	1	4286	4104	2/18/14	3/8/17	Complete Genome	"School of Biomedical Sciences, Faculty of Medicine, The Chinese University of Hong Kong"	SAMN03081429	GCA_000572125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/125/GCA_000572125.1_ASM57212v1	-	HKBS1
Mycobacterium tuberculosis BT2	1010835	PRJNA66063	66063	Terrabacteria group	Actinobacteria	4.4019	65.6	chromosome:NZ_CP002882.1/CP002882.1	-	1	4279	4090	2/18/14	3/8/17	Complete Genome	"School of Biomedical Sciences, Faculty of Medicine, The Chinese University of Hong Kong"	SAMN03081430	GCA_000572155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/155/GCA_000572155.1_ASM57215v1	-	BT2
Nitriliruptor alkaliphilus DSM 45188	1069448	PRJNA82631	82631	Terrabacteria group	Actinobacteria	5.5581	72.1	-	LATF01	1	5215	5079	4/6/15	4/16/17	Scaffold	JGI	SAMN02745916	GCA_000969705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/705/GCA_000969705.1_ASM96970v1	-	DSM 45188
Amycolatopsis nigrescens CSC17Ta-90	1068980	PRJNA82633	82633	Terrabacteria group	Actinobacteria	9.11101	70	-	ARVW01	1	8536	8369	4/26/13	4/17/17	Contig	JGI	SAMN02261308	GCA_000384315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/315/GCA_000384315.1_ASM38431v1	-	CSC17Ta-90
Mycobacterium tuberculosis BT1	1010836	PRJNA66065	66065	Terrabacteria group	Actinobacteria	4.3994	65.6	chromosome:NZ_CP002883.1/CP002883.1	-	1	4278	4085	2/18/14	3/8/17	Complete Genome	"School of Biomedical Sciences, Faculty of Medicine, The Chinese University of Hong Kong"	SAMN03081431	GCA_000572175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/175/GCA_000572175.1_ASM57217v1	-	BT1
Jiangella gansuensis DSM 44835	987045	PRJNA63165	63165	Terrabacteria group	Actinobacteria	5.58578	70.9	-	AZXT01	1	5132	4976	1/3/14	4/17/17	Scaffold	JGI	SAMN02597276	GCA_000515395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/395/GCA_000515395.1_ASM51539v1	-	DSM 44835
Mycobacterium tuberculosis CCDC5180	443150	PRJNA66071	66071	Terrabacteria group	Actinobacteria	4.41435	65.6	chromosome:NZ_CP002885.1/CP002885.1	-	1	4289	4111	2/18/14	3/8/17	Complete Genome	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN03081432	GCA_000572195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/195/GCA_000572195.1_ASM57219v1	-	CCDC5180
Lactobacillus gastricus DSM 16045	1423749	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.84846	41.6	-	AZFN01	66	1851	1738	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369419	GCA_001434365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/365/GCA_001434365.1_ASM143436v1	26415554	DSM 16045
Mycobacterium tuberculosis str. Haarlem	395095	PRJNA17353	17353	Terrabacteria group	Actinobacteria	4.40822	65.6	chromosome:NC_022350.1/CP001664.1	-	1	4271	4108	9/11/13	3/9/17	Complete Genome	Broad Institute	SAMN03081423	GCA_000153685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/685/GCA_000153685.2_ASM15368v2	-	Haarlem
Streptomyces viridosporus T7A	665577	PRJNA63193	63193	Terrabacteria group	Actinobacteria	8.2933	72.4	-	AJFD01	6	7534	6957	11/30/12	5/19/17	Scaffold	JGI	SAMN02261266	GCA_000316095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/095/GCA_000316095.1_ASM31609v1	23833133	T7A
Syntrophorhabdus aromaticivorans UI	909663	PRJNA63195	63195	Proteobacteria	delta/epsilon subdivisions	3.75948	52	-	AJUN01	3	3608	3427	12/30/13	4/17/17	Scaffold	JGI	SAMN02597160	GCA_000512235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/235/GCA_000512235.1_ASM51223v1	24503990	UI
Rhizobium mesoamericanum STM3625	1211777	PRJEB128	169542	Proteobacteria	Alphaproteobacteria	6.46193	58.9	-	CANI01	7	6383	5948	10/5/12	5/19/17	Scaffold	Genoscope CEA	SAMEA2272470	GCA_000312665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/665/GCA_000312665.1_ASM31266v1	23405314	STM3625
Rhizobium grahamii CCGE 502	990285	PRJNA63215	63215	Proteobacteria	Alphaproteobacteria	7.14604	59.4	-	AEYE02	80	6972	6570	9/18/12	4/8/17	Scaffold	Universidad Nacional Autonoma de Mex	SAMN02469448	GCA_000298315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/315/GCA_000298315.2_ASM29831v2	23144400	CCGE 502
Vibrio ordalii ATCC 33509	990998	PRJNA63225	63225	Proteobacteria	Gammaproteobacteria	3.41217	44.7	-	AEZC01	254	3161	2858	6/22/11	4/7/17	Contig	Oregon Health Sciences University	SAMN02470772	GCA_000257205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/205/GCA_000257205.1_ASM25720v1	21576332	ATCC 33509
Mycobacterium tuberculosis EAI5	1306414	PRJNA210717	210717	Terrabacteria group	Actinobacteria	4.39117	65.6	chromosome:NC_021740.1/CP006578.1	-	1	4261	4100	7/11/13	3/8/17	Complete Genome	"Department of Life Sciences, Mumbai University, Mumbai, India"	SAMN02603180	GCA_000422125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/125/GCA_000422125.1_ASM42212v1	24604653	EAI5
Scytonema hofmannii PCC 7110	128403	PRJNA157363	157363	Terrabacteria group	Cyanobacteria/Melainabacteria group	12.2944	41.5	-	ANNX02	40	10672	9970	3/14/13	4/6/17	Scaffold	Heinrich-Heine-University Duesseldorf	SAMN02469880	GCA_000346485.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/485/GCA_000346485.2_ASM34648v2	23221676	PCC 7110
Alkaliflexus imshenetskii DSM 15055	927658	PRJNA63507	63507	FCB group	Bacteroidetes/Chlorobi group	4.12227	42.7	-	AJUM01	5	3278	3169	1/8/14	4/17/17	Scaffold	JGI	SAMN02597159	GCA_000517065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/065/GCA_000517065.1_ASM51706v1	-	Z-7010
Mycobacterium tuberculosis CCDC5079	443149	PRJNA66069	66069	Terrabacteria group	Actinobacteria	4.41432	65.6	chromosome:NC_021251.1/CP002884.1	-	1	4285	4101	5/20/13	3/8/17	Complete Genome	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02603646	GCA_000400615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/615/GCA_000400615.1_ASM40061v1	23627759	CCDC5079
Mycobacterium tuberculosis EAI5/NITR206	1310115	PRJNA193387	193387	Terrabacteria group	Actinobacteria	4.39031	65.6	chromosome:NC_021194.1/CP005387.1	-	1	4272	3959	5/8/13	3/8/17	Complete Genome	"National Institute of Tuberculosis Research, Chennai, India"	SAMN02603653	GCA_000389945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/945/GCA_000389945.1_ASM38994v1	23788533	EAI5/NITR206
Thermoanaerobacter siderophilus SR4	880478	PRJNA64483	64483	Terrabacteria group	Firmicutes	2.54016	34.2	chromosome:NZ_CM001486.1/CM001486.1	AJUD01	1	2550	2089	5/7/12	4/17/17	Chromosome	JGI	SAMN02261414	GCA_000262445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/445/GCA_000262445.1_ASM26244v1	-	SR4
Caldanaerobius polysaccharolyticus DSM 13641	935948	PRJNA64485	64485	Terrabacteria group	Firmicutes	2.49986	41.9	-	ATXZ01	3	2486	2352	7/15/13	4/17/17	Scaffold	JGI	SAMN00203941	GCA_000427425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/425/GCA_000427425.1_ASM42742v1	-	DSM 13641
Mycobacterium tuberculosis str. Haarlem/NITR202	1304279	PRJNA192916	192916	Terrabacteria group	Actinobacteria	4.40479	65.6	chromosome:CP004886.1	-	1	3730	3681	5/8/13	1/31/14	Complete Genome	"National Institute of Tuberculosis Research, Chennai, India"	SAMN02603650	GCA_000389905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/905/GCA_000389905.1_ASM38990v1	-	Haarlem/NITR202
Prevotella oryzae DSM 17970	915438	PRJNA64555	64555	FCB group	Bacteroidetes/Chlorobi group	3.28799	37	-	JFBS01	1	2653	2552	3/3/14	4/17/17	Scaffold	JGI	SAMN02849400	GCA_000585355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/355/GCA_000585355.1_ASM58535v1	-	DSM 17970
Clostridium colicanis DSM 13634	1121305	PRJNA313154	313154	Terrabacteria group	Firmicutes	2.6195	31.2	-	LTBB01	83	2495	2329	3/18/16	4/12/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04516095	GCA_001593985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/985/GCA_001593985.1_ASM159398v1	-	DSM 13634
Mycobacterium tuberculosis CAS/NITR204	1310114	PRJNA193386	193386	Terrabacteria group	Actinobacteria	4.39288	65.6	chromosome:CP005386.1	-	1	4008	3960	5/8/13	1/31/14	Complete Genome	"National Institute of Tuberculosis Research, Chennai, India"	SAMN02603652	GCA_000389925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/925/GCA_000389925.1_ASM38992v1	-	CAS/NITR204
Azotobacter vinelandii CA6	1283331	PRJNA186699	186699	Proteobacteria	Gammaproteobacteria	5.32321	65.6	chromosome:NC_021150.1/CP005095.1	-	1	4981	4776	4/23/13	5/18/17	Complete Genome	North Carolina State University	SAMN01889173	GCA_000380365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/365/GCA_000380365.1_ASM38036v1	23792740	CA6
Methylobacterium mesophilicum SR1.6/6	908290	PRJNA175757	175757	Proteobacteria	Alphaproteobacteria	6.21445	69.5	-	ANPA01	29	5899	5670	4/2/13	5/19/17	Contig	Rede Paraense de genômica e proteômica	SAMN02471377	GCA_000364445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/445/GCA_000364445.1_ASM36444v1	23788544	SR1.6/6
Mycobacterium tuberculosis str. Beijing/NITR203	1306400	PRJNA193385	193385	Terrabacteria group	Actinobacteria	4.41113	65.6	chromosome:NC_021054.1/CP005082.1	-	1	4294	4016	4/15/13	5/19/17	Complete Genome	"National Institute of Tuberculosis Research, Chennai, India"	SAMN02603651	GCA_000364825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/825/GCA_000364825.1_ASM36482v1	23788533	Beijing/NITR203
Rikenella microfusus DSM 15922	880526	PRJNA51795	51795	FCB group	Bacteroidetes/Chlorobi group	2.88008	57	-	ATXW01	2	2359	2269	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441234	GCA_000427365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/365/GCA_000427365.1_ASM42736v1	-	DSM 15922
Actinomyces europaeus ACS-120-V-Col10b	883069	PRJNA52095	52095	Terrabacteria group	Actinobacteria	1.90671	56.6	-	AGWN01	3	1700	1620	6/13/13	4/17/17	Scaffold	Broad Institute	SAMN02596752	GCA_000411155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/155/GCA_000411155.1_Acti_euro_ACS-120-V-COL10B_V1	-	ACS-120-V-Col10b
Actinomyces hongkongensis	178339	PRJNA343394	343394	Terrabacteria group	Actinobacteria	2.14149	69.9	chromosome:NZ_CP017298.1/CP017298.1	-	1	1816	1622	9/26/16	4/17/17	Chromosome	HebeiProvincialInstitute	SAMN05786934	GCA_001746855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/855/GCA_001746855.1_ASM174685v1	-	HKU8
Actinomyces turicensis ACS-279-V-Col4	883077	PRJNA52101	52101	Terrabacteria group	Actinobacteria	1.96775	57.1	-	AGWQ01	5	1754	1653	9/13/12	4/17/17	Scaffold	Broad Institute	SAMN02463884	GCA_000296505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/505/GCA_000296505.1_Acti_turi_ACS-279-V-COL4_V1	-	ACS-279-V-Col4
Anaeroglobus geminatus F0357	861450	PRJNA50397	50397	Terrabacteria group	Firmicutes	1.79885	49	-	AGCJ01	57	1813	1484	12/21/11	4/17/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN02299437	GCA_000239275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/275/GCA_000239275.1_ASM23927v1	-	F0357
Mycobacterium bovis BCG str. Korea 1168P	1206780	PRJNA170028	170028	Terrabacteria group	Actinobacteria	4.37671	65.6	chromosome:NC_020245.2/CP003900.2	-	1	4241	4046	2/8/13	5/19/17	Complete Genome	Korean Institute of Tuberculosis	SAMN02603488	GCA_000338715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/338/715/GCA_000338715.2_ASM33871v2	23516200	Korea 1168P
Mycobacterium tuberculosis 7199-99	1138877	PRJEA82273	82273	Terrabacteria group	Actinobacteria	4.4212	65.6	chromosome:NC_020089.1/HE663067.1	-	1	4288	4129	1/7/13	5/19/17	Complete Genome	"Center for Biotechnology, Bielefeld University"	SAMEA2272730	GCA_000331445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/445/GCA_000331445.1_ASM33144v1	23424287	7199-99
Mycobacterium tuberculosis H37Rv	83332	PRJNA37301	37301	Terrabacteria group	Actinobacteria	4.41171	65.6	chromosome:NC_018143.2/CP003248.2	-	1	4286	4143	7/12/12	3/8/17	Complete Genome	Broad Institute	SAMN03081436	GCA_000277735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/735/GCA_000277735.2_ASM27773v2	-	H37Rv
Corynebacterium coyleae	53374	PRJEB16385	349311	Terrabacteria group	Actinobacteria	2.56894	61.3	-	FNRU01	2	2464	2318	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488531	GCA_900105505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/505/GCA_900105505.1_IMG-taxon_2634166170_annotated_assembly	-	DSM 44184
Facklamia hominis CCUG 36813	883111	PRJNA52177	52177	Terrabacteria group	Firmicutes	1.89762	39	-	AGZD01	1	1767	1668	9/18/12	4/8/17	Scaffold	Broad Institute	SAMN02463905	GCA_000301035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/035/GCA_000301035.1_Fack_homi_CCUG_36813_V1	-	CCUG 36813
Propionimicrobium lymphophilum DSM 4903	1123001	PRJNA185648	185648	Terrabacteria group	Actinobacteria	2.03562	56.1	-	AUIB01	26	1887	1790	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441171	GCA_000423485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/485/GCA_000423485.1_ASM42348v1	-	DSM 4903
Mycobacterium tuberculosis KZN 605	478435	PRJNA21057	21057	Terrabacteria group	Actinobacteria	4.39912	65.6	chromosome:NC_018078.1/CP001976.1	-	1	4276	4108	6/19/12	5/18/17	Complete Genome	Broad Institute	SAMN00103288	GCA_000154605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/605/GCA_000154605.2_ASM15460v2	-	KZN 605
Burkholderiales bacterium JOSHI_001	864051	PRJNA59875	59875	Proteobacteria	Betaproteobacteria	5.60063	68.8	chromosome:NZ_CM001438.1/CM001438.1	AHLZ01	1	5001	4885	1/24/12	5/18/17	Chromosome	JGI	SAMN02261382	GCA_000244995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/995/GCA_000244995.1_ASM24499v1	-	JOSHI_001
Sulfurimonas gotlandica GD1	929558	PRJNA60283	60283	Proteobacteria	delta/epsilon subdivisions	2.95268	33.6	chromosome:NZ_AFRZ01000001.1/AFRZ01000001.1	AFRZ01	1	2894	2817	1/18/12	4/7/17	Chromosome	IOW-Leibniz Institute for Baltic Sea Research	SAMN02470075	GCA_000242915.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/915/GCA_000242915.2_ASM24291v2	22203982	GD1
Afipia broomeae ATCC 49717	883078	PRJNA52155	52155	Proteobacteria	Alphaproteobacteria	5.26197	61.3	-	AGWX01	4	5086	4953	11/6/12	5/18/17	Scaffold	Broad Institute	SAMN02596753	GCA_000314675.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/675/GCA_000314675.2_Afip_broo_ATCC_49717_V1	-	ATCC 49717
Mycobacterium tuberculosis RGTB327	1091500	PRJNA73717	73717	Terrabacteria group	Actinobacteria	4.38012	65.6	chromosome:CP003233.1	-	1	3739	3691	3/20/12	1/31/14	Complete Genome	Rajiv Gandhi Centre for Biotechnology	SAMN02603736	GCA_000277085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/085/GCA_000277085.1_ASM27708v1	-	RGTB327
Mycobacterium tuberculosis RGTB423	1091501	PRJNA73719	73719	Terrabacteria group	Actinobacteria	4.40659	65.6	chromosome:CP003234.1	-	1	3670	3622	3/20/12	1/31/14	Complete Genome	Rajiv Gandhi Centre for Biotechnology	SAMN02603737	GCA_000277105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/105/GCA_000277105.1_ASM27710v1	-	RGTB423
Saccharomonospora azurea NA-128	882081	PRJNA62037	62037	Terrabacteria group	Actinobacteria	4.76385	70.05	chromosome:NZ_CM001466.1/CM001466.1	AGIU02	1	4464	4217	10/18/11	5/19/17	Chromosome	JGI	SAMN02261398	GCA_000231055.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/055/GCA_000231055.3_ASM23105v3	22768365	NA-128
Opitutaceae bacterium TAV1	278956	PRJNA62139	62139	PVC group	Verrucomicrobia	7.07348	63.2	-	AHKS02	2	5887	5704	1/24/12	5/19/17	Scaffold	JGI	SAMN02261400	GCA_000243495.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/495/GCA_000243495.3_ASM24349v3	22535930	TAV1
Acinetobacter bereziniae NIPH 3	1217651	PRJNA183301	183301	Proteobacteria	Gammaproteobacteria	4.97828	38	-	APPK01	12	4663	4426	4/16/13	5/18/17	Scaffold	Broad Institute	SAMN01087916	GCA_000368505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/505/GCA_000368505.1_Acin_bere_NIPH_3_V1	-	NIPH 3
Acinetobacter parvus DSM 16617 = CIP 108168	981333	PRJNA183326	183326	Proteobacteria	Gammaproteobacteria	2.91264	41.8	-	APOM01	9	2904	2628	4/16/13	4/10/17	Scaffold	Broad Institute	SAMN01828186	GCA_000368025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/025/GCA_000368025.1_Acin_parv_CIP108168_V1	-	CIP 108168
Geminocystis herdmanii PCC 6308	113355	PRJNA62511	62511	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.26342	34.3	chromosome:NZ_CM001775.1/CM001775.1	ALVO01	1	4087	3917	1/17/13	4/17/17	Chromosome	DOE Joint Genome Institute	SAMN02256519	GCA_000332235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/235/GCA_000332235.1_ASM33223v1	23277585	PCC 6308
Lacinutrix algicola	342954	PRJNA239394	239394	FCB group	Bacteroidetes/Chlorobi group	3.66135	31.4	-	LIQH01	46	3312	3198	10/28/15	4/16/17	Contig	KORIA POLAR RESEARCH INSTITUTE	SAMN04002512	GCA_001418085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/085/GCA_001418085.1_ASM141808v1	26882010	AKS293
Methylocaldum szegediense O-12	675524	PRJNA63053	63053	Proteobacteria	Gammaproteobacteria	5.02229	57.1	-	ATXX01	2	4595	4358	7/15/13	4/17/17	Scaffold	JGI	SAMN00120042	GCA_000427385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/385/GCA_000427385.1_ASM42738v1	-	O-12
Prochlorothrix hollandica PCC 9006 = CALU 1027	317619	PRJNA158811	158811	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.64634	54.3	-	ANKN01	13	4692	4350	1/18/13	4/8/17	Scaffold	JGI	SAMN02261252	GCA_000332315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/315/GCA_000332315.1_ASM33231v1	23277585	PCC 9006
Streptomyces pharetrae CZA14	1144883	PRJNA82841	82841	Terrabacteria group	Actinobacteria	8.42666	72.2	-	MRYD01	685	7861	6737	5/10/17	5/23/17	Contig	University of the Western Cape	SAMN06140980	GCA_002128465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/465/GCA_002128465.1_ASM212846v1	-	CZA14
Rickettsia helvetica C9P9	1144888	PRJNA82855	82855	Proteobacteria	Alphaproteobacteria	1.41711	32.2133	chromosome:NZ_CM001467.1/CM001467.1; plasmid pRhe:NZ_CM001468.1/CM001468.1	AICO01	2	1633	1235	2/21/12	4/17/17	Chromosome	"CNRS UMR 6236, Faculté de médecine, Université de la Méditerranée"	SAMN02471333	GCA_000255355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/355/GCA_000255355.1_ASM25535v1	22535934	C9P9
Mycobacterium tuberculosis str. Erdman = ATCC 35801	652616	PRJDB66	88109	Terrabacteria group	Actinobacteria	4.39235	65.6	chromosome 1:NC_020559.1/AP012340.1	-	1	4284	4089	3/2/12	3/9/17	Complete Genome	National Center for Global Health and Medicine	SAMD00061050	GCA_000350205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/205/GCA_000350205.1_ASM35020v1	22535945	Erdman (ATCC35801)
Dermatophilus congolensis DSM 44180 = NBRC 105199	1121387	PRJNA185573	185573	Terrabacteria group	Actinobacteria	2.61771	59.4	-	AUCS01	10	2302	2203	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440871	GCA_000429885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/885/GCA_000429885.1_ASM42988v1	-	DSM 44180
Mycobacterium tuberculosis CTRI-2	707235	PRJNA43171	43171	Terrabacteria group	Actinobacteria	4.39853	65.6	chromosome:NC_017524.1/CP002992.1	-	1	4277	4117	8/25/11	5/18/17	Complete Genome	"Research Institute for Physical-Chemical Medicine, Moscow, Russia"	SAMN02603755	GCA_000224435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/435/GCA_000224435.1_ASM22443v1	23437175	CTRI-2
Zavarzinella formosa DSM 19928	1123508	PRJNA83145	83145	PVC group	Planctomycetes	10.0864	58.8	-	AIAB01	105	8696	8119	3/21/12	5/19/17	Scaffold	BGI-shenzhen	SAMN02469381	GCA_000255705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/705/GCA_000255705.1_ASM25570v1	22740668	DSM 19928
Arthrobacter rhombi	71253	PRJEB19158	374427	Terrabacteria group	Actinobacteria	3.32655	64.2	-	FUHW01	53	3095	2977	2/11/17	5/31/17	Contig	MICALIS	SAMEA80377168	GCA_900163545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/545/GCA_900163545.1_ASM90016354v1	-	B Ar 00.02
Thermoplasmatales archaeon Gpl	261391	PRJNA209808	209808	Euryarchaeota	Thermoplasmata	1.82726	37.9	-	ATDV01	22	1923	1923	8/14/13	8/11/14	Contig	DOE Joint Genome Institute	SAMN02981543	GCA_001856845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/845/GCA_001856845.1_amd_g-plasma	23865623	-
uncultured SUP05 cluster bacterium	655186	PRJNA34785	34785	Proteobacteria	Gammaproteobacteria	1.17322	39.3	-	ACSG01	92	1347	1291	11/9/09	8/12/14	Scaffold	"University of British Columbia, Canada"	SAMN02954310	GCA_000205985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/205/985/GCA_000205985.2_ASM20598v2	19900896	-
Candidatus Micrarchaeum acidiphilum ARMAN-1	1912863	PRJNA349044	349044	DPANN group	Candidatus Micrarchaeota	1.01018	46	-	MOEG01	25	1105	1035	12/6/16	4/17/17	Scaffold	UC Berkeley	SAMN05937499	GCA_001889985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/985/GCA_001889985.1_ASM188998v1	28005056	-
Thermoplasmatales archaeon A-plasma	667135	PRJNA209806	209806	Euryarchaeota	Thermoplasmata	1.9896	46.2	-	ATMF01	118	2280	2280	8/14/13	8/11/14	Contig	University of California Berkeley	SAMN02981548	GCA_000447225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/225/GCA_000447225.1_amd_a-plasma	-	-
Thermoplasmatales archaeon E-plasma	667137	PRJNA209805	209805	Euryarchaeota	Thermoplasmata	1.6605	38.6	-	ATME01	8	1674	1674	8/14/13	8/11/14	Scaffold	University of California Berkeley	SAMN02981547	GCA_000496135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/135/GCA_000496135.1_amd_e-plasma	-	-
Thermoplasmatales archaeon I-plasma	667138	PRJNA209804	209804	Euryarchaeota	Thermoplasmata	1.68796	44.3	-	ATMD01	6	1696	1696	8/14/13	8/11/14	Contig	University of California Berkeley	SAMN02981546	GCA_001856825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/825/GCA_001856825.1_amd_i-plasma	-	-
Mycobacterium canettii CIPT 140010059	1048245	PRJEA68135	68135	Terrabacteria group	Actinobacteria	4.48206	65.6	chromosome:NC_015848.1/HE572590.1	-	1	4293	4064	7/14/11	5/19/17	Complete Genome	Wellcome Trust Sanger Insititute	SAMEA2272660	GCA_000253375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/375/GCA_000253375.1_ASM25337v1	"2,238,974,423,291,580"	CIPT 140010059
Mycobacterium africanum GM041182	572418	PRJEA68095	68095	Terrabacteria group	Actinobacteria	4.38931	65.6	chromosome:NC_015758.1/FR878060.1	-	1	4243	4045	7/5/11	5/19/17	Complete Genome	Wellcome Trust Sanger Insititute	SAMEA2272165	GCA_000253355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/355/GCA_000253355.1_ASM25335v1	22389744	GM041182
endosymbiont of Bathymodiolus sp.	174145	PRJNA65421	65421	Proteobacteria	Gammaproteobacteria	0.619851	38.5	-	CAEB01	78	647	586	8/8/11	4/17/17	Contig	Max Planck Institute Bremen	SAMEA3138420	GCA_000297135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/135/GCA_000297135.1_ASM29713v1	21833083	-
Mycobacterium tuberculosis CCDC5180	443150	PRJNA19583	19583	Terrabacteria group	Actinobacteria	4.40598	65.6	chromosome:NC_017522.1/CP001642.1	-	1	4284	4064	7/5/11	5/18/17	Complete Genome	Beijing Genomics institute and National Institue for Communicable Disease Control and Prevetion	SAMN02603011	GCA_000270365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/365/GCA_000270365.1_ASM27036v1	21914894	CCDC5180
uncultured marine crenarchaeote 'Gulf of Maine'	1089683	PRJNA72705	72705	TACK group	Crenarchaeota	6.4512	34.4	-	AGBE01	1584	-	-	9/30/11	8/12/14	Scaffold	University of Southern California	SAMN02954312	GCA_000230485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/485/GCA_000230485.1_ASM23048v1	22050608	-
Clostridium arbusti SL206	545243	PRJDB38	82697	Terrabacteria group	Firmicutes	3.97028	29.9	-	BAEV01	243	3659	3423	2/4/12	4/8/17	Contig	Korea Research Institute of Bioscience and Biotechnology	SAMD00036608	GCA_000246895.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/895/GCA_000246895.2_ASM24689v2	22535938	SL206
Peptoniphilus rhinitidis 1-13	875454	PRJDB39	82699	Terrabacteria group	Firmicutes	1.88526	29.9	-	BAEW01	56	1839	1738	2/4/12	4/7/17	Contig	Korea Research Institute of Bioscience and Biotechnology	SAMD00036609	GCA_000246925.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/925/GCA_000246925.2_ASM24692v2	22493209	13-Jan
Myroides injenensis M09-0166	1008457	PRJDB40	82701	FCB group	Bacteroidetes/Chlorobi group	3.45816	31.3	-	BAEX01	226	3034	2881	2/4/12	4/7/17	Contig	Korea Research Institute of Bioscience and Biotechnology	SAMD00036610	GCA_000246945.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/945/GCA_000246945.2_ASM24694v2	22535932	M09-0166
Sporolactobacillus vineae DSM 21990 = SL153	1123284	PRJNA179459	179459	Terrabacteria group	Firmicutes	2.86236	49.5	-	ARJJ01	45	2807	2709	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440464	GCA_000377985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/985/GCA_000377985.1_ASM37798v1	-	DSM 21990
Methylophilaceae bacterium 11	1101195	PRJNA83449	83449	Proteobacteria	Betaproteobacteria	2.78683	45.7	-	JCKJ01	1	2643	2581	1/31/14	4/9/17	Contig	JGI	SAMN02849406	GCA_000525025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/025/GCA_000525025.1_ASM52502v1	-	11
Orenia marismortui DSM 5156	926561	PRJNA84255	84255	Terrabacteria group	Firmicutes	3.45977	30.7	-	AQZS01	9	3244	3098	4/22/13	4/17/17	Scaffold	JGI	SAMN02261313	GCA_000379025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/025/GCA_000379025.1_ASM37902v1	-	DSM 5156
Rhodovibrio salinarum DSM 9154	1089552	PRJNA84315	84315	Proteobacteria	Alphaproteobacteria	4.17652	66	-	AZXM01	1	3802	3705	1/3/14	4/9/17	Scaffold	JGI	SAMN02597269	GCA_000515255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/255/GCA_000515255.1_ASM51525v1	-	DSM 9154
Mycobacterium tuberculosis CCDC5079	443149	PRJNA19585	19585	Terrabacteria group	Actinobacteria	4.39881	65.6	chromosome:CP001641.1	-	1	3696	3647	7/5/11	1/30/14	Complete Genome	Beijing Genomics institute and National Institue for Communicable Disease Control and Prevention	SAMN02603010	GCA_000270345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/345/GCA_000270345.1_ASM27034v1	-	CCDC5079
Mycobacterium tuberculosis KZN 4207	478433	PRJNA21053	21053	Terrabacteria group	Actinobacteria	4.39499	65.6	chromosome:NC_016768.1/CP001662.1	-	1	4271	4121	4/7/11	5/18/17	Complete Genome	Broad Institute	SAMN03081422	GCA_000154585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/585/GCA_000154585.2_ASM15458v2	-	KZN 4207
Pedobacter agri PB92	1149865	PRJNA84275	84275	FCB group	Bacteroidetes/Chlorobi group	5.14155	38	-	AJLG01	379	4791	4311	4/11/12	5/19/17	Contig	Korea Basic Science Institute (KBSI)	SAMN02470139	GCA_000258495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/495/GCA_000258495.1_PB92_1.0	22740666	PB92
Sphingomonas phyllosphaerae 5.2	1090318	PRJNA86089	86089	Proteobacteria	Alphaproteobacteria	3.92097	67.2	-	ATTI01	2	3593	3445	7/9/13	4/8/17	Contig	JGI	SAMN02441592	GCA_000419605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/605/GCA_000419605.1_ASM41960v1	-	5.2
Geminicoccus roseus DSM 18922	1089551	PRJNA84367	84367	Proteobacteria	Alphaproteobacteria	5.69837	68.5	-	ATYL01	5	5168	5008	7/15/13	4/17/17	Scaffold	JGI	SAMN02441221	GCA_000427665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/665/GCA_000427665.1_ASM42766v1	-	DSM 18922
Salisaeta longa DSM 21114	1089550	PRJNA84369	84369	FCB group	Bacteroidetes/Chlorobi group	3.39902	63.5	-	ATTH01	3	2765	2694	7/9/13	4/17/17	Contig	JGI	SAMN02441591	GCA_000419585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/585/GCA_000419585.1_ASM41958v1	-	DSM 21114
Glaciecola punicea ACAM 611	1121923	PRJDB34	84419	Proteobacteria	Gammaproteobacteria	3.07686	43.1	-	BAET01	35	2750	2635	2/21/12	4/7/17	Contig	Shandong University	SAMD00036606	GCA_000252165.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/165/GCA_000252165.2_ASM25216v2	"2,262,850,025,009,840"	ACAM 611
Phaeospirillum molischianum DSM 120	1150626	PRJEA84415	84415	Proteobacteria	Alphaproteobacteria	3.80562	61.5	-	CAHP01	61	3614	3423	3/13/12	4/8/17	Contig	CNRS	SAMEA2272023	GCA_000294655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/655/GCA_000294655.1_Pm_DSM120	22689244	DSM 120
Mycobacterium tuberculosis KZN 1435	478434	PRJNA21055	21055	Terrabacteria group	Actinobacteria	4.39825	65.6	chromosome:NC_012943.1/CP001658.1	-	1	4277	4109	7/9/09	5/18/17	Complete Genome	Broad Institute	SAMN00763683	GCA_000023625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/625/GCA_000023625.1_ASM2362v1	-	KZN 1435
Pseudomonas fuscovaginae	50340	PRJEB16115	348596	Proteobacteria	Gammaproteobacteria	6.59235	61.4	chromosome I:NZ_LT629972.1/LT629972.1	-	1	5869	5682	10/27/16	4/5/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216581	GCA_900108595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/595/GCA_900108595.1_IMG-taxon_2667527230_annotated_assembly	-	LMG 2158
Micromonospora lupini str. Lupac 08	1150864	PRJNA84455	84455	Terrabacteria group	Actinobacteria	7.32582	71.9	-	CAIE01	4	6754	6479	4/16/12	4/17/17	Scaffold	Universidad de Salamanca	SAMEA3138422	GCA_000297395.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/395/GCA_000297395.2_ASM29739v2	22815450	Lupac 08
Natronorubrum tibetense GA33	1114856	PRJNA85145	85145	Euryarchaeota	Halobacteria	4.93484	62.3	-	ARPH01	5	4705	4557	4/25/13	4/8/17	Scaffold	JGI	SAMN02261315	GCA_000383975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/975/GCA_000383975.1_ASM38397v1	-	GA33
Mycobacterium bovis BCG str. Moreau RDJ	413996	PRJNA18279	18279	Terrabacteria group	Actinobacteria	4.34012	65.6	chromosome:NZ_AM412059.1/AM412059.2	-	1	4209	4018	5/23/09	4/3/17	Complete Genome	Fiocruz - FAP	SAMEA4532327	GCA_000967285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/285/GCA_000967285.1_ASM96728v1	21914899	Moreau RDJ
Mycobacterium bovis BCG str. Tokyo 172	561275	PRJDA31211	31211	Terrabacteria group	Actinobacteria	4.37171	65.6	chromosome:NC_012207.1/AP010918.1	-	1	4234	4037	3/10/09	3/29/17	Complete Genome	Japan BCG Laboratory	SAMD00060950	GCA_000010685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/685/GCA_000010685.1_ASM1068v1	19200449	Tokyo 172
Mycobacterium tuberculosis F11	336982	PRJNA15642	15642	Terrabacteria group	Actinobacteria	4.42443	65.6	chromosome:NC_009565.1/CP000717.1	-	1	4288	4126	6/7/07	5/18/17	Complete Genome	Broad Institute	SAMN00103286	GCA_000016925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/925/GCA_000016925.1_ASM1692v1	-	F11
Pseudomonas avellanae BPIC 631	1154758	PRJNA84293	84293	Proteobacteria	Gammaproteobacteria	6.62562	57.3	-	AKBS01	297	5770	4994	10/4/12	5/19/17	Scaffold	University of Toronto Centre for the Analysis of Genome Evolution and Function	SAMN02471966	GCA_000302915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/915/GCA_000302915.1_Pav631_1.0	22800299	BPIC 631
Thermococcus zilligii AN1	1151117	PRJNA85543	85543	Euryarchaeota	Thermococci	1.76456	54.5	-	AJLF01	5	1896	1789	4/11/12	4/17/17	Contig	Korea Research Institute of Bioscience and Biotechnology	SAMN02470188	GCA_000258515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/515/GCA_000258515.1_TheZil1.0	22740682	AN1
Haloglycomyces albus DSM 45210	1089549	PRJNA86067	86067	Terrabacteria group	Actinobacteria	3.53542	60.4	-	AZUQ01	1	3194	3078	1/3/14	4/17/17	Contig	JGI	SAMN02597195	GCA_000527155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/155/GCA_000527155.1_ASM52715v1	-	DSM 45210
Methylovulum miyakonense HT12	1078846	PRJNA86077	86077	Proteobacteria	Gammaproteobacteria	4.68714	50.7	-	AQZU01	1	4345	4162	4/22/13	4/17/17	Scaffold	JGI	SAMN02261317	GCA_000384075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/075/GCA_000384075.1_ASM38407v1	-	HT12
Leisingera daeponensis DSM 23529	999547	PRJNA86087	86087	Proteobacteria	Alphaproteobacteria	4.6426	64.3	-	AXBD01	5	4377	4238	9/30/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440716	GCA_000473145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/145/GCA_000473145.1_ASM47314v1	-	DSM 23529
Borrelia crocidurae str. Achema	1155096	PRJNA85135	85135	Spirochaetes	Spirochaetia	1.52889	29.1638	chromosome:NC_017808.1/CP003426.1; plasmid unnamed:NC_017794.1/CP003427.1; plasmid unnamed10:NC_017779.1/CP003436.1; plasmid unnamed11:NC_017812.1/CP003437.1; plasmid unnamed12:NC_017780.1/CP003438.1; plasmid unnamed13:NC_017813.1/CP003439.1; plasmid unnamed14:NC_017781.1/CP003440.1; plasmid unnamed15:NC_017782.1/CP003441.1; plasmid unnamed16:NC_017814.1/CP003442.1; plasmid unnamed17:NC_017783.1/CP003443.1; plasmid unnamed18:NC_017784.1/CP003444.1; plasmid unnamed19:NC_017815.1/CP003445.1; plasmid unnamed2:NC_017774.1/CP003428.1; plasmid unnamed20:NC_017785.1/CP003446.1; plasmid unnamed21:NC_017816.1/CP003447.1; plasmid unnamed22:NC_017795.1/CP003448.1; plasmid unnamed23:NC_017786.1/CP003449.1; plasmid unnamed24:NC_017817.1/CP003450.1; plasmid unnamed25:NC_017796.1/CP003451.1; plasmid unnamed26:NC_017818.1/CP003452.1; plasmid unnamed27:NC_017797.1/CP003453.1; plasmid unnamed28:NC_017798.1/CP003454.1; plasmid unnamed29:NC_017819.1/CP003455.1; plasmid unnamed3:NC_017809.1/CP003429.1; plasmid unnamed30:NC_017799.1/CP003456.1; plasmid unnamed31:NC_017800.1/CP003457.1; plasmid unnamed32:NC_017787.1/CP003458.1; plasmid unnamed33:NC_017820.1/CP003459.1; plasmid unnamed34:NC_017788.1/CP003460.1; plasmid unnamed35:NC_017789.1/CP003461.1; plasmid unnamed36:NC_017821.1/CP003462.1; plasmid unnamed37:NC_017801.1/CP003463.1; plasmid unnamed38:NC_017802.1/CP003464.1; plasmid unnamed39:NC_017822.1/CP003465.1; plasmid unnamed4:NC_017775.1/CP003430.1; plasmid unnamed5:NC_017810.1/CP003431.1; plasmid unnamed6:NC_017776.1/CP003432.1; plasmid unnamed7:NC_017777.1/CP003433.1; plasmid unnamed8:NC_017811.1/CP003434.1; plasmid unnamed9:NC_017778.1/CP003435.1	-	40	1438	1220	4/20/12	5/18/17	Chromosome	URMITE	SAMN02604274	GCA_000259345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/345/GCA_000259345.1_ASM25934v1	22740657	Achema
Serinicoccus profundi MCCC 1A05965	1043205	PRJNA67939	67939	Terrabacteria group	Actinobacteria	3.4339	72	-	AFYF01	102	3209	3056	8/30/11	4/7/17	Contig	"Key Laboratory of Marine Biogenetic Resources, Third Institute of Oceanography, State Oceanic Administration (SOA), PR China"	SAMN02471205	GCA_000224715.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/715/GCA_000224715.2_ASM22471v2	-	MCCC 1A05965
Agrobacterium albertimagni AOL15	1156935	PRJNA86075	86075	Proteobacteria	Alphaproteobacteria	5.08506	61.2	-	ALJF01	55	4869	4730	10/2/12	5/18/17	Contig	University of Illinois at Chicago	SAMN01084074	GCA_000300855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/855/GCA_000300855.1_ASM30085v1	23209236	AOL15
Bradyrhizobium genosp. SA-4 str. CB756	936455	PRJNA87029	87029	Proteobacteria	Alphaproteobacteria	9.82688	63.6	-	AXBC01	2	9227	8827	9/30/13	4/17/17	Scaffold	JGI	SAMN02441117	GCA_000473125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/125/GCA_000473125.1_ASM47312v1	-	CB756
Mycobacterium tuberculosis H37Ra	419947	PRJNA18883	18883	Terrabacteria group	Actinobacteria	4.41998	65.6	chromosome:NC_009525.1/CP000611.1	-	1	4296	4152	5/31/07	5/18/17	Complete Genome	Chinese National Human Genome Center at Shanghai	SAMN02603128	GCA_000016145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/145/GCA_000016145.1_ASM1614v1	18584054	H37Ra; ATCC 25177
Mycobacterium bovis BCG str. Pasteur 1173P2	410289	PRJEA18059	18059	Terrabacteria group	Actinobacteria	4.37452	65.6	chromosome:NC_008769.1/AM408590.1	-	1	4239	4042	1/8/07	5/19/17	Complete Genome	Mycobacterium bovis sequencing teams	SAMEA2272684	GCA_000009445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/445/GCA_000009445.1_ASM944v1	17372194	BCG Pasteur 1173P2
Diplorickettsia massiliensis 20B	1156986	PRJNA86907	86907	Proteobacteria	Gammaproteobacteria	1.72797	38.9	-	AJGC01	6	1978	1612	4/2/12	4/17/17	Contig	Unité des Rickettsies CNRS URMITE 3236 (WHO Collaborative center)	SAMN02471334	GCA_000257395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/395/GCA_000257395.1_ASM25739v1	22628513	20B
Bradyrhizobium elkanii WSM2783	1038860	PRJNA163061	163061	Proteobacteria	Alphaproteobacteria	9.90236	62.4	-	AXAP01	217	9510	8824	9/30/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02441450	GCA_000472865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/865/GCA_000472865.1_ASM47286v1	-	WSM2783
Mycobacterium tuberculosis CDC1551	83331	PRJNA223	223	Terrabacteria group	Actinobacteria	4.40384	65.6	chromosome:NC_002755.2/AE000516.2	-	1	4282	4068	10/2/01	5/18/17	Complete Genome	TIGR	SAMN02603992	GCA_000008585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/585/GCA_000008585.1_ASM858v1	12218036	CDC1551
Mycobacterium tuberculosis H37Rv	83332	PRJNA224	224	Terrabacteria group	Actinobacteria	4.41153	65.6	chromosome:NC_000962.3/AL123456.3	-	1	4008	3906	9/7/01	8/2/16	Complete Genome	Sanger Institute	SAMEA3138326	GCA_000195955.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/955/GCA_000195955.2_ASM19595v2	"96,342,301,236,843,000,000,000"	H37Rv
Sporichthya polymorpha DSM 43042	1048339	PRJNA88125	88125	Terrabacteria group	Actinobacteria	5.50015	71.4	-	AQZX01	1	5217	5047	4/22/13	4/17/17	Scaffold	JGI	SAMN02261321	GCA_000384115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/115/GCA_000384115.1_ASM38411v1	-	DSM 43042
Halomicrobium katesii DSM 19301	1069082	PRJNA88127	88127	Euryarchaeota	Halobacteria	3.60777	65	-	AQZY01	2	3601	3382	4/22/13	3/29/17	Scaffold	JGI	SAMN02261322	GCA_000379085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/085/GCA_000379085.1_ASM37908v1	-	DSM 19301
Succinispira mobilis DSM 6222	1069080	PRJNA88129	88129	Terrabacteria group	Firmicutes	2.08524	36.2	-	AQZZ01	1	1976	1891	4/22/13	4/17/17	Scaffold	JGI	SAMN02261323	GCA_000384135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/135/GCA_000384135.1_ASM38413v1	-	DSM 6222
Enterococcus malodoratus ATCC 43197	1158601	PRJNA191903	191903	Terrabacteria group	Firmicutes	4.62713	39.9	-	ASWA01	6	4521	4346	5/31/13	4/8/17	Scaffold	Broad Institute	SAMN02596952	GCA_000407185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/185/GCA_000407185.1_Ente_malo_ATCC43197_V2	-	ATCC 43197
Enterococcus raffinosus ATCC 49464	1158602	PRJNA88841	88841	Terrabacteria group	Firmicutes	4.29432	39.4	-	AJAL01	5	4232	4024	5/3/13	4/8/17	Scaffold	Broad Institute	SAMN00809111	GCA_000393895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/895/GCA_000393895.1_Ente_raff_ATCC49464_V1	-	ATCC 49464
Enterococcus villorum ATCC 700913	1158604	PRJNA88845	88845	Terrabacteria group	Firmicutes	3.08076	35.1	-	AJAN01	19	2871	2626	5/3/13	4/8/17	Scaffold	Broad Institute	SAMN00809113	GCA_000393935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/935/GCA_000393935.1_Ente_vill_ATCC700913_V1	-	ATCC 700913
Enterococcus ratti	150033	PRJNA270385	270385	Terrabacteria group	Firmicutes	2.48566	34.3	-	JXLB01	78	2320	2137	11/25/16	4/17/17	Contig	Inner Mongolia Agricultural University	SAMN03267184	GCA_001886195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/195/GCA_001886195.1_ASM188619v1	-	DSM 15687
Enterococcus asini ATCC 700915	1158606	PRJNA191897	191897	Terrabacteria group	Firmicutes	2.57271	44.7	-	ASVU01	2	2490	2350	5/31/13	4/8/17	Contig	Broad Institute	SAMN02596946	GCA_000407365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/365/GCA_000407365.1_Ente_asin_ATCC700915_V2	-	ATCC 700915
Enterococcus pallens ATCC BAA-351	1158607	PRJNA191909	191909	Terrabacteria group	Firmicutes	5.43745	40	-	ASWD01	13	5256	5113	5/31/13	4/8/17	Contig	Broad Institute	SAMN02596955	GCA_000407485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/485/GCA_000407485.1_Ente_pall_BAA-351_V2	-	ATCC BAA-351
Enterococcus haemoperoxidus ATCC BAA-382	1158608	PRJNA191901	191901	Terrabacteria group	Firmicutes	3.58192	35.7	-	ASVY01	2	3292	3158	5/31/13	4/8/17	Scaffold	Broad Institute	SAMN02596950	GCA_000407165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/165/GCA_000407165.1_Ente_haem_BAA-382_V2	-	ATCC BAA-382
Enterococcus moraviensis ATCC BAA-383	1158609	PRJNA88855	88855	Terrabacteria group	Firmicutes	3.60184	36.1	-	AJAS01	6	3394	3286	5/3/13	4/8/17	Scaffold	Broad Institute	SAMN00809118	GCA_000394015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/015/GCA_000394015.1_Ente_mora_BAA-383_V1	-	ATCC BAA-383
Enterococcus phoeniculicola ATCC BAA-412	1158610	PRJNA191910	191910	Terrabacteria group	Firmicutes	3.91097	36.4	-	ASWE01	11	3574	3455	5/31/13	4/8/17	Contig	Broad Institute	SAMN02596956	GCA_000407505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/505/GCA_000407505.1_Ente_phoe_BAA-412_V2	-	ATCC BAA-412
Enterococcus caccae ATCC BAA-1240	1158612	PRJNA88859	88859	Terrabacteria group	Firmicutes	3.55959	35.8	-	AJAU01	4	3306	3175	5/3/13	4/8/17	Scaffold	Broad Institute	SAMN00809121	GCA_000394055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/055/GCA_000394055.1_Ente_cocc_BAA-1240_V1	-	ATCC BAA-1240
Enterococcus gilvus ATCC BAA-350	1158614	PRJNA191913	191913	Terrabacteria group	Firmicutes	4.17991	41.4	-	ASWH01	5	4156	3964	5/31/13	4/8/17	Contig	Broad Institute	SAMN02596959	GCA_000407545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/545/GCA_000407545.1_Ente_gilf_BAA-350_PQ1_CCUG_45553_V2	-	ATCC BAA-350
Methylomicrobium buryatense 5G	675511	PRJNA89087	89087	Proteobacteria	Gammaproteobacteria	5.06728	48.7	-	AOTL01	2	4552	4332	2/21/13	5/19/17	Scaffold	JGI	SAMN02261325	GCA_000341735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/735/GCA_000341735.1_ASM34173v1	23814105	5G
Thioalkalivibrio sp. K90mix	396595	PRJNA30759	30759	Proteobacteria	Gammaproteobacteria	2.98506	65.562	chromosome:NC_013889.1/CP001905.1; plasmid pTK9001:NC_013930.1/CP001906.1	-	2	2958	2818	2/17/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598475	GCA_000025545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/545/GCA_000025545.1_ASM2554v1	22675584	K90mix
Sphingobium sp. SYK-6	627192	PRJNA67115	67115	Proteobacteria	Alphaproteobacteria	4.34813	65.5589	chromosome:NC_015976.1/AP012222.1; plasmid pSLPG:NC_015974.1/AP012223.1	-	2	4049	3932	9/1/11	4/17/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00061118	GCA_000283515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/515/GCA_000283515.1_ASM28351v1	22207743	SYK-6
Cutibacterium granulosum DSM 20700	1160719	PRJNA189038	189038	Terrabacteria group	Actinobacteria	2.12823	64.1	-	AOSS01	372	1938	1673	9/3/13	4/8/17	Contig	Aarhus University	SAMN02393705	GCA_000463665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/665/GCA_000463665.1_PG_DSM_assembly2012	24053623	DSM 20700
Halomonas stevensii S18214	1177117	PRJNA89433	89433	Proteobacteria	Gammaproteobacteria	3.69374	60.2	-	AJTS01	53	3491	3289	7/2/12	4/17/17	Contig	Korea Research Institute of Bioscience and Biotechnology	SAMN02472261	GCA_000275725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/725/GCA_000275725.1_162.HSS18214.1	22933767	S18214
Thioflavicoccus mobilis 8321	765912	PRJNA60883	60883	Proteobacteria	Gammaproteobacteria	4.13752	65.5486	chromosome:NC_019940.1/CP003051.1; plasmid pTHIMO01:NC_019941.1/CP003052.1	-	2	3683	3538	12/20/12	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02232063	GCA_000327045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/045/GCA_000327045.1_ASM32704v1	-	8321
Massilia sp. WG5	1707785	PRJNA294208	294208	Proteobacteria	Betaproteobacteria	6.26731	65.5319	chromosome:NZ_CP012640.1/CP012640.1; plasmid unnamed 1:NZ_CP012641.1/CP012641.1; plasmid unnamed 2:NZ_CP012642.1/CP012642.1	-	3	5631	5437	10/26/15	4/11/17	Complete Genome	Zhejiang University	SAMN04017855	GCA_001412595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/595/GCA_001412595.1_ASM141259v1	-	WG5
Streptomyces auratus AGR0001	1160718	PRJNA88535	88535	Terrabacteria group	Actinobacteria	7.88542	71.3	-	AJGV01	19	6808	6398	7/23/12	5/19/17	Scaffold	"Yunnan Institution of Microbiology, Yunnan University"	SAMN02472162	GCA_000280865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/865/GCA_000280865.1_ASM28086v1	22965094	AGR0001
Mycobacterium ulcerans subsp. shinshuense	1124626	PRJDB5034	338008	Terrabacteria group	Actinobacteria	6.0663	65.5231	chromosome:AP017624.1; plasmid pShTP:AP017625.1	-	2	5136	4535	8/5/16	8/5/16	Complete Genome	National Institute of Infectious Diseases	SAMD00056531	GCA_002355775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/775/GCA_002355775.1_ASM235577v1	-	ATCC 33728
Ureibacillus thermosphaericus str. Thermo-BF	1160707	PRJNA86905	86905	Terrabacteria group	Firmicutes	2.84611	35.6	-	AJIK01	63	2746	2673	5/16/12	4/17/17	Contig	Agricultural Biotechnology Research Institute of Iran	SAMN02393732	GCA_000284835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/835/GCA_000284835.1_UreThermo-BF	22843574	Thermo-BF
Microbacterium laevaniformans OR221	1160710	PRJNA88485	88485	Terrabacteria group	Actinobacteria	3.42611	68	-	AJGR01	535	3210	3073	3/21/12	4/10/17	Contig	Oak Ridge National Laboratory	SAMN02470753	GCA_000255595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/595/GCA_000255595.2_OR221_CLC	22628508	OR221
Sphingomonas panacis	1560345	PRJNA308882	308882	Proteobacteria	Alphaproteobacteria	5.32294	65.5201	chromosome:NZ_CP014168.1/CP014168.1; plasmid unnamed:NZ_CP014169.1/CP014169.1	-	2	4904	4734	9/1/16	4/13/17	Complete Genome	Kyung Hee University	SAMN04417200	GCA_001717955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/955/GCA_001717955.1_ASM171795v1	-	DCY99
Corynebacterium appendicis CIP 107643	1161099	PRJEB18828	360789	Terrabacteria group	Actinobacteria	2.24806	64.3	-	FTOF01	32	2193	2057	1/14/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444817	GCA_900156665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/665/GCA_900156665.1_IMG-taxon_2681813517_annotated_assembly	-	DSM 44531
Erwinia piriflorinigrans CFBP 5888	1161919	PRJEA89443	89443	Proteobacteria	Gammaproteobacteria	3.93065	52.9	-	CAHS01	25	3657	3462	11/25/13	4/17/17	Contig	"Center for Biotechnology, Bielefeld University"	SAMEA3146270	GCA_001050515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/515/GCA_001050515.1_ASM105051v1	23726521	CFBP 5888
Herbaspirillum lusitanum P6-12	1161913	PRJNA89453	89453	Proteobacteria	Betaproteobacteria	4.90487	60.3	-	AJHH01	820	4818	3918	3/26/12	5/18/17	Contig	INCT of Biological Nitrogen Fixation	SAMN02469784	GCA_000256565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/565/GCA_000256565.1_Asm2.0	22815451	P6-12
Haemophilus sputorum CCUG 13788	1035839	PRJNA67089	67089	Proteobacteria	Gammaproteobacteria	2.14354	39.7	-	AFNK01	87	2076	1983	6/1/11	4/7/17	Contig	BiRC	SAMN02393707	GCA_000238795.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/795/GCA_000238795.2_ASM23879v2	-	CCUG 13788
Coriobacteriaceae bacterium BV3Ac1	1111135	PRJNA89627	89627	Terrabacteria group	Actinobacteria	1.80138	49.5	-	AWUP01	21	1606	1537	9/19/13	4/9/17	Contig	JCVI	SAMN00829152	GCA_000468855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/855/GCA_000468855.1_CspBC3AC1v1.0	-	BV3Ac1
Peptoniphilus sp. BV3AC2	1111133	PRJNA89635	89635	Terrabacteria group	Firmicutes	1.9952	34.2	-	AWXD01	34	1843	1731	10/23/13	4/9/17	Contig	JCVI	SAMN02436401	GCA_000478945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/945/GCA_000478945.1_CspBV3AC2v1.0	-	BV3AC2
Peptoniphilus sp. BV3C26	1111134	PRJNA89637	89637	Terrabacteria group	Firmicutes	1.92597	31.6	-	AWXB01	69	1917	1757	10/23/13	4/9/17	Contig	JCVI	SAMN02436477	GCA_000478985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/985/GCA_000478985.1_CspBV3C26v1.0	-	BV3C26
Eubacterium nodatum ATCC 33099	1161902	PRJNA89653	89653	Terrabacteria group	Firmicutes	1.82956	38.1	-	AZKM01	29	1678	1568	12/18/13	4/17/17	Contig	JCVI	SAMN00829151	GCA_000510425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/510/425/GCA_000510425.1_EnATCC33099v1.0	-	ATCC 33099
Listeria fleischmannii subsp. coloradonensis	1081736	PRJNA72857	72857	Terrabacteria group	Firmicutes	2.81751	38.6	-	AGUG01	406	2871	2481	3/14/12	2/26/17	Contig	Cornell University	SAMN00794682	GCA_000252625.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/625/GCA_000252625.2_ASM25262v2	23524352	TTU M1-001
Rhodanobacter spathiphylli B39	1163407	PRJNA89545	89545	Proteobacteria	Gammaproteobacteria	3.91058	66.5	-	AJXT01	203	3454	3353	5/23/12	4/17/17	Contig	NIH	SAMN02469836	GCA_000264295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/295/GCA_000264295.1_Rh17631	22843592	B39
Rhodanobacter fulvus Jip2	1163408	PRJNA89547	89547	Proteobacteria	Gammaproteobacteria	3.8796	65.6	-	AJXU01	130	3447	3352	5/23/12	4/17/17	Contig	NIH	SAMN02469837	GCA_000264315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/315/GCA_000264315.1_Rh18449	22843592	Jip2
Rhodanobacter thiooxydans LCS2	1163409	PRJNA89549	89549	Proteobacteria	Gammaproteobacteria	4.0939	67.2	-	AJXW01	210	3657	3508	5/23/12	4/7/17	Contig	NIH	SAMN02469838	GCA_000264375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/375/GCA_000264375.1_Rh18863	22843592	LCS2
Mycobacterium liflandii 128FXT	459424	PRJNA20227	20227	Terrabacteria group	Actinobacteria	6.39954	65.5196	chromosome:NC_020133.1/CP003899.1; plasmid pMUM002:NC_011355.1/EU271968.1	-	2	5632	4811	1/16/13	5/19/17	Complete Genome	Monash University	SAMN02603618	GCA_000026445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/445/GCA_000026445.2_ASM2644v2	23204453	128FXT
Peanut witches'-broom phytoplasma NTU2011	1163385	PRJNA89719	89719	Terrabacteria group	Tenericutes	0.566694	24.4194	plasmid pPnWB2011:NZ_AMWZ01000014.1/AMWZ01000014.1	AMWZ01	14	504	443	3/26/13	4/17/17	Contig	Academia Sinica	SAMN02393726	GCA_000364425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/425/GCA_000364425.1_ASM36442v1	23626855	NTU2011
Dinoroseobacter shibae DFL 12 = DSM 16493	398580	PRJNA17417	17417	Proteobacteria	Alphaproteobacteria	4.41787	65.5105	chromosome:NC_009952.1/CP000830.1; plasmid pDSHI01:NC_009955.1/CP000831.1; plasmid pDSHI02:NC_009956.1/CP000832.1; plasmid pDSHI03:NC_009957.1/CP000833.1; plasmid pDSHI04:NC_009958.1/CP000834.1; plasmid pDSHI05:NC_009959.1/CP000835.1	-	6	4266	4147	10/5/07	5/18/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598387	GCA_000018145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/145/GCA_000018145.1_ASM1814v1	-	DFL 12
Halomicrobium mukohataei DSM 12286	485914	PRJNA27945	27945	Euryarchaeota	Halobacteria	3.33235	65.5068	chromosome:NC_013202.1/CP001688.1; plasmid pHmuk01:NC_013201.1/CP001689.1	-	2	3341	3232	9/3/09	3/22/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002610	GCA_000023965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/965/GCA_000023965.1_ASM2396v1	21304667	DSM 12286
Bordetella trematum	123899	PRJEB13149	316956	Proteobacteria	Betaproteobacteria	4.48554	65.502	chromosome 1:NZ_LT546645.1/LT546645.1; plasmid 2:NZ_LT546646.1/LT546646.1	-	2	4168	3985	4/7/16	4/12/17	Complete Genome	SC	SAMEA3906487	GCA_900078695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/695/GCA_900078695.1_H044680328	-	H044680328
Massilia putida	1141883	PRJNA359387	359387	Proteobacteria	Betaproteobacteria	7.52302	65.5009	chromosome:NZ_CP019038.1/CP019038.1; plasmid unnamed1:NZ_CP019036.1/CP019036.1; plasmid unnamed2:NZ_CP019037.1/CP019037.1	-	3	6603	6320	1/10/17	4/17/17	Complete Genome	Jiangnan UniversityGuangdong Institute of Microbiology	SAMN06191485	GCA_001941825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/825/GCA_001941825.1_ASM194182v1	-	6NM-7T
Chlorogloeopsis fritschii PCC 6912	211165	PRJNA104961	104961	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.75174	41.5	-	AJLN01	161	6742	6541	12/5/12	5/18/17	Contig	HHU Duesseldorf	SAMN02469883	GCA_000317285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/285/GCA_000317285.1_ChlPCC6912_1.0	23221676	PCC 6912
Fischerella thermalis PCC 7521	98439	PRJNA104969	104969	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.43827	41	-	AJLL01	141	4600	4352	12/5/12	5/18/17	Contig	Heinrich-Heine-University Duesseldorf	SAMN02469885	GCA_000317225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/225/GCA_000317225.1_FisPCC7521_1.0	23221676	PCC 7521
Hydrogenophaga sp. RAC07	1842537	PRJNA319837	319837	Proteobacteria	Betaproteobacteria	4.67468	65.5	chromosome:NZ_CP016449.1/CP016449.1	-	1	4412	4299	8/25/16	4/13/17	Complete Genome	Los Alamos National Laboratory	SAMN04909718	GCA_001713375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/375/GCA_001713375.1_ASM171337v1	-	RAC07
Fischerella muscicola PCC 7414	306281	PRJNA104967	104967	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.90295	41.3	-	AJLK01	271	5969	5489	12/5/12	5/18/17	Contig	Heinrich-Heine-University Duesseldorf	SAMN02469884	GCA_000317205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/205/GCA_000317205.1_FisPCC7414_1.0	23221676	PCC 7414
Pseudoalteromonas flavipulchra JG1	1165091	PRJNA104943	104943	Proteobacteria	Gammaproteobacteria	5.50399	43.2	-	AJMP01	61	4855	4602	4/17/12	5/19/17	Scaffold	Ocean university of china	SAMN02470762	GCA_000259115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/115/GCA_000259115.1_ASM25911v1	22740664	JG1
Richelia intracellularis HH01	1165094	PRJEA104979	104979	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.24376	33.7	-	CAIY01	90	2035	1879	2/12/13	4/8/17	Contig	UC-Santa Cruz	SAMEA2272692	GCA_000350105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/105/GCA_000350105.1_ASM35010v1	-	HH01
Lachnospiraceae bacterium JC7	1165092	PRJNA109283	109283	Terrabacteria group	Firmicutes	3.59188	43.4	-	ALYD01	220	3181	2980	1/6/14	4/9/17	Contig	Commonwealth Scientific and Industrial Research Organisation	SAMN02597345	GCA_000513555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/555/GCA_000513555.1_Lachnospiraceae_sp._JC7_draft_genome	-	JC7
Imtechella halotolerans K1	946077	PRJNA112533	112533	FCB group	Bacteroidetes/Chlorobi group	3.08695	35.5	-	AJJU01	44	2734	2662	4/10/12	4/7/17	Contig	"Institute of Microbial Technology(IMTECH)-CSIR,Sector 39A,Chandigarh,160036"	SAMN02469995	GCA_000260835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/835/GCA_000260835.1_ASM26083v1	22740661	K1
Halomonas smyrnensis AAD6	339656	PRJNA109291	109291	Proteobacteria	Gammaproteobacteria	3.56192	67.9	-	AJKS02	34	3290	3150	6/6/12	4/17/17	Contig	Marmara University	SAMN02470292	GCA_000265245.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/245/GCA_000265245.2_HalSmy2.0	23012275	AAD6
Pseudomonas alcaligenes	43263	PRJNA314705	314705	Proteobacteria	Gammaproteobacteria	4.4063	65.5	chromosome:NZ_CP014784.1/CP014784.1	-	1	4106	4006	3/25/16	4/12/17	Complete Genome	"New England Biolabs, Inc."	SAMN04539664	GCA_001597285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/285/GCA_001597285.1_ASM159728v1	-	NEB 585
Rheinheimera nanhaiensis E407-8	562729	PRJDB83	126237	Proteobacteria	Gammaproteobacteria	3.9872	51.3	-	BAFK01	55	3741	3610	3/24/12	4/7/17	Contig	Shandong University	SAMD00036617	GCA_000296695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/695/GCA_000296695.1_ASM29669v1	23209246	E407-8
Schlesneria paludicola DSM 18645	1123242	PRJNA82977	82977	PVC group	Planctomycetes	8.70239	55.6	-	AHZR01	23	7136	6930	3/21/12	5/19/17	Scaffold	Building No.11|Beishan Industial Zone|Yantian District|Shenzhen 518083|China 	SAMN02469369	GCA_000255655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/655/GCA_000255655.1_ASM25565v1	22740668	DSM 18645
Actinomyces meyeri	52773	PRJNA282954	282954	Terrabacteria group	Actinobacteria	2.04909	65.5	chromosome:NZ_CP012072.1/CP012072.1	-	1	1804	1700	8/6/15	4/10/17	Complete Genome	The Forsyth Institute	SAMN03704036	GCA_001262055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/055/GCA_001262055.1_ASM126205v1	-	W712
Lactobacillus oligofermentans DSM 15707 = LMG 22743	1423778	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.83223	35.6	-	AZFE01	32	1808	1727	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02369429	GCA_001434315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/315/GCA_001434315.1_ASM143431v1	26415554	DSM 15707
Rhodococcus imtechensis RKJ300 = JCM 13270	1165867	PRJNA112531	112531	Terrabacteria group	Actinobacteria	8.23134	67.2	-	AJJH01	178	7962	7245	4/10/12	5/19/17	Contig	"Institute of Microbial Technology(IMTECH)-CSIR,Sector 39A,Chandigarh,160036"	SAMN02470011	GCA_000260815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/815/GCA_000260815.1_ASM26081v1	22689233	RKJ300
Staphylococcus vitulinus F1028	1167632	PRJNA133755	133755	Terrabacteria group	Firmicutes	2.55948	32.4	-	AJTR01	223	2542	2450	8/10/12	4/17/17	Contig	Korea Food Research Institute	SAMN02470143	GCA_000286335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/335/GCA_000286335.1_StaVit1.0	23045483	F1028
gamma proteobacterium BDW918	1168065	PRJNA156867	156867	Proteobacteria	Gammaproteobacteria	4.30774	50.8	-	AJMK01	17	3865	3754	4/26/12	5/19/17	Scaffold	"Department of Chemical Engineering, Pohang University of Science and Technolgy, Korea"	SAMN02470816	GCA_000259575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/575/GCA_000259575.1_GamBDW1.0	22740675	BDW918
Corynebacterium uterequi	1072256	PRJNA280912	280912	Terrabacteria group	Actinobacteria	2.41944	65.5	chromosome:NZ_CP011546.1/CP011546.1	-	1	2221	2113	6/5/15	4/10/17	Complete Genome	Bielefeld University	SAMN03480647	GCA_001021065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/065/GCA_001021065.1_ASM102106v1	26227590	DSM 45634
Streptomyces sulphureus DSM 40104	1123321	PRJNA182442	182442	Terrabacteria group	Actinobacteria	7.10495	71.7	-	ARLC01	26	6166	5930	4/23/13	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440478	GCA_000381025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/025/GCA_000381025.1_ASM38102v1	-	DSM 40104
Corynebacterium vitaeruminis DSM 20294	1224164	PRJNA172966	172966	Terrabacteria group	Actinobacteria	2.93178	65.5	chromosome:NZ_CP004353.1/CP004353.1	-	1	2639	2529	2/5/14	4/9/17	Complete Genome	"CeBiTec, Bielefeld University"	SAMN03081455	GCA_000550805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/805/GCA_000550805.1_ASM55080v1	-	DSM 20294
Haloplanus natans DSM 17983	926690	PRJNA157819	157819	Euryarchaeota	Halobacteria	3.79793	65	-	ATYM01	8	3855	3664	7/15/13	4/17/17	Scaffold	JGI	SAMN02440896	GCA_000427685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/685/GCA_000427685.1_ASM42768v1	-	DSM 17983
Mycobacterium xenopi	1789	PRJNA299467	299467	Terrabacteria group	Actinobacteria	4.9334	65.9	-	LQQB01	146	4794	4489	4/20/17	4/22/17	Contig	University of Trento	SAMN04216958	GCA_002102015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/015/GCA_002102015.1_ASM210201v1	-	DSM 43995
Mycobacterium rhodesiae NBB3	710685	PRJNA60027	60027	Terrabacteria group	Actinobacteria	6.41574	65.5	chromosome:NC_016604.1/CP003169.1	-	1	6255	6078	12/12/11	5/18/17	Complete Genome	JGI	SAMN02261383	GCA_000230895.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/895/GCA_000230895.3_ASM23089v3	-	NBB3
Bordetella petrii	94624	PRJNA28135	28135	Proteobacteria	Betaproteobacteria	5.28795	65.5	chromosome:NC_010170.1/AM902716.1	-	1	5100	4912	12/18/07	5/18/17	Complete Genome	Bielefeld Univ	SAMEA3138272	GCA_000067205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/067/205/GCA_000067205.1_ASM6720v1	18826580	DSM 12804
Methylobacter marinus A45	674036	PRJNA157067	157067	Proteobacteria	Gammaproteobacteria	4.98879	52.7	-	ARVS01	2	4536	4380	4/25/13	4/17/17	Scaffold	JGI	SAMN02261244	GCA_000383855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/855/GCA_000383855.1_ASM38385v1	26798114	A45
Streptomyces purpureus KA281	1054860	PRJNA157921	157921	Terrabacteria group	Actinobacteria	7.45833	71.5	-	ARAD01	1	6822	6477	4/22/13	3/9/17	Scaffold	JGI	SAMN02261248	GCA_000384175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/175/GCA_000384175.1_ASM38417v1	-	KA281
Bradyrhizobium sp. ORS 278	114615	PRJNA19575	19575	Proteobacteria	Alphaproteobacteria	7.45659	65.5	chromosome:NC_009445.1/CU234118.1	-	1	6788	6589	5/1/07	5/18/17	Complete Genome	Genoscope	SAMEA3138227	GCA_000026145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/145/GCA_000026145.1_ASM2614v1	17540897	ORS278
Ralstonia mannitolilytica	105219	PRJNA273689	273689	Proteobacteria	Betaproteobacteria	5.0723	65.4858	chromosome 1:NZ_CP010799.1/CP010799.2; chromosome 2:NZ_CP010800.1/CP010800.1; plasmid pRMAN01:NZ_CP010801.1/CP010801.1	-	3	4789	4619	3/17/15	4/10/17	Complete Genome	UCSF	SAMN03295199	GCA_000954135.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/954/135/GCA_000954135.2_ASM95413v2	-	SN82F48
Cupriavidus necator N-1	1042878	PRJNA67893	67893	Proteobacteria	Betaproteobacteria	8.48086	65.4817	chromosome 1:NC_015726.1/CP002877.1; chromosome 2:NC_015723.1/CP002878.1; plasmid pBB1:NC_015727.1/CP002879.1; plasmid pBB2:NC_015724.1/CP002880.1	-	4	7941	7479	6/24/11	5/18/17	Complete Genome	Georg-August-University Goettingen	SAMN02603269	GCA_000219215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/215/GCA_000219215.1_ASM21921v1	21742890	N-1
Haloferax volcanii DS2	309800	PRJNA12524	12524	Euryarchaeota	Halobacteria	4.0129	65.4625	chromosome:NC_013967.1/CP001956.1; plasmid pHV1:NC_013968.1/CP001957.1; plasmid pHV2:NC_013965.1/CP001954.1; plasmid pHV3:NC_013964.1/CP001953.1; plasmid pHV4:NC_013966.1/CP001955.1	-	5	4023	3857	3/23/10	4/7/17	Complete Genome	TIGR	SAMN02604027	GCA_000025685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/685/GCA_000025685.1_ASM2568v1	20333302	DS2
Sphingopyxis alaskensis RB2256	317655	PRJNA13907	13907	Proteobacteria	Alphaproteobacteria	3.37371	65.4569	chromosome:NC_008048.1/CP000356.1; plasmid F plasmid:NC_008036.1/CP000357.1	-	2	3304	3194	5/18/06	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02598319	GCA_000013985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/985/GCA_000013985.1_ASM1398v1	19805210	RB2256
Mastigocladopsis repens PCC 10914	221288	PRJNA158735	158735	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.46565	43.5	-	ALVW01	3	5682	5360	11/27/12	4/17/17	Scaffold	JGI	SAMN02261251	GCA_000315565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/565/GCA_000315565.1_ASM31556v1	23277585	PCC 10914
Cylindrospermum stagnale PCC 7417	56107	PRJNA158809	158809	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.61059	42.1988	chromosome:NC_019757.1/CP003642.1; plasmid pCYLST.01:NC_020050.1/CP003643.1; plasmid pCYLST.02:NC_019744.1/CP003644.1; plasmid pCYLST.03:NC_019758.1/CP003645.1	-	4	6516	6158	12/6/12	5/18/17	Chromosome	JGI	SAMN02261342	GCA_000317535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/535/GCA_000317535.1_ASM31753v1	-	PCC 7417
Cupriavidus sp. NH9	2036817	PRJNA345268	345268	Proteobacteria	Betaproteobacteria	8.24694	65.4546	chromosome 1:NZ_CP017757.1/CP017757.1; chromosome 2:NZ_CP017758.1/CP017758.1; plasmid pENH91:NZ_CP017760.1/CP017760.1; plasmid pENH92:NZ_CP017759.1/CP017759.1	-	4	7525	7231	3/3/17	9/15/17	Complete Genome	Shizuoka University	SAMN05862088	GCA_002011925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/925/GCA_002011925.1_ASM201192v1	-	NH9
Pseudanabaena biceps PCC 7429	927668	PRJNA158837	158837	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.47642	43.2	-	ALWB01	464	4699	4435	1/18/13	5/19/17	Contig	JGI	SAMN02261350	GCA_000332215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/215/GCA_000332215.1_ASM33221v1	23277585	PCC 7429
Pseudomonas pseudoalcaligenes KF707 = NBRC 110670	1149133	PRJDB3360	317560	Proteobacteria	Gammaproteobacteria	6.24295	65.4521	chromosome:AP014862.1; plasmid pKF707:AP014863.1	-	2	5842	5755	4/5/16	11/12/16	Complete Genome	National Institute of Advanced Industrial Science and Technology (AIST)	SAMD00023458	GCA_002355475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/475/GCA_002355475.1_ASM235547v1	-	KF707
Hydrocarboniphaga effusa AP103	1172194	PRJNA158311	158311	Proteobacteria	Gammaproteobacteria	5.19393	65.2	-	AKGD01	4	4573	4447	6/17/12	5/18/17	Contig	Chonbuk National University	SAMN02469573	GCA_000271305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/305/GCA_000271305.1_ASM27130v1	22933753	AP103
Paeniclostridium sordellii	1505	PRJDB5274	353271	Terrabacteria group	Firmicutes	3.55041	27.8	-	BDJI01	3	3459	3266	12/7/16	4/6/17	Contig	Korea Basic Science Institute	SAMD00066803	GCA_001950115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/115/GCA_001950115.1_ASM195011v1	-	CBA7122
Mycobacterium ulcerans Agy99	362242	PRJNA16230	16230	Terrabacteria group	Actinobacteria	5.80576	65.419	chromosome:NC_008611.1/CP000325.1; plasmid pMUM001:NC_005916.1/BX649209.1	-	2	5238	4056	12/1/06	9/6/17	Complete Genome	Institut Pasteur	SAMN02603346	GCA_000013925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/925/GCA_000013925.2_ASM1392v2	17210928	Agy99
[Pseudomonas] geniculata ATCC 19374 = JCM 13324	1336242	PRJNA299447	299447	Proteobacteria	Gammaproteobacteria	4.80979	66.2	-	LLXT01	170	4540	4374	11/4/15	4/11/17	Contig	CSIR-Institute of Microbial Technology	SAMN04207799	GCA_001431625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/625/GCA_001431625.1_ASM143162v1	27014232	JCM 13324
Marinilabilia salmonicolor JCM 21150	1168289	PRJNA156963	156963	FCB group	Bacteroidetes/Chlorobi group	4.98263	41.9	-	AJKI01	72	3918	3813	4/17/12	5/19/17	Contig	"Institute of Microbial Technology(IMTECH)-CSIR,Sector 39A,Chandigarh,160036"	SAMN02469978	GCA_000259075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/075/GCA_000259075.1_ASM25907v1	22740671	JCM 21150
Arthrobacter sp. FB24	290399	PRJNA12640	12640	Terrabacteria group	Actinobacteria	5.07048	65.4189	chromosome:NC_008541.1/CP000454.1; plasmid 1:NC_008537.1/CP000455.1; plasmid 2:NC_008538.1/CP000456.1; plasmid 3:NC_008539.1/CP000457.1	-	4	4623	4486	10/24/06	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598278	GCA_000196235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/235/GCA_000196235.1_ASM19623v1	-	FB24
Arthrobacter sp. ERGS1:01	1704044	PRJNA293260	293260	Terrabacteria group	Actinobacteria	4.93669	65.4115	chromosome:NZ_CP012479.1/CP012479.1; plasmid unnamed1:NZ_CP012478.1/CP012478.1; plasmid unnamed2:NZ_CP012477.1/CP012477.1	-	3	4474	4235	9/14/15	4/11/17	Complete Genome	CSIR-Institute of Himalayan Bioresource Technology	SAMN04000040	GCA_001281315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/315/GCA_001281315.1_ASM128131v1	-	ERGS1:01
Pseudomonas kilonensis	132476	PRJNA277995	277995	Proteobacteria	Gammaproteobacteria	6.84372	60.7	-	JZXC01	73	6146	5930	4/2/15	4/10/17	Contig	Monash University Malaysia	SAMN03401053	GCA_000968575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/575/GCA_000968575.1_Pfluo_1855_344_v1	25977435	1855-344
Paenibacillus sonchi X19-5	1173684	PRJNA158933	158933	Terrabacteria group	Firmicutes	7.50728	50.4	-	AJTY01	1327	6875	5984	12/3/12	5/19/17	Contig	China Agricultural University	SAMN02469471	GCA_000316285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/285/GCA_000316285.1_Paenibacillus_sonchi_X19-5T	-	X19-5
Bacillus psychrosaccharolyticus ATCC 23296	1174504	PRJNA159255	159255	Terrabacteria group	Firmicutes	4.59045	38.8	-	AJTN02	265	4692	4247	10/15/12	4/9/17	Contig	Complutense University	SAMN00857837	GCA_000305495.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/495/GCA_000305495.2_BacPsy2.0	23723405	ATCC 23296
Rickettsia honei RB	1175313	PRJNA158665	158665	Proteobacteria	Alphaproteobacteria	1.26876	32.4	-	AJTT01	11	1554	1209	5/16/12	4/17/17	Contig	URMITE	SAMN02469768	GCA_000263055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/055/GCA_000263055.1_Rho1.0	22815457	RB
Methanomassiliicoccus luminyensis B10	1175296	PRJNA159487	159487	Euryarchaeota	Thermoplasmata	2.62023	60.5	-	CAJE01	26	2645	2555	5/28/12	4/8/17	Contig	URMITE	SAMEA3138426	GCA_000308215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/215/GCA_000308215.1_ASM30821v1	22887657	B10
Allobaculum stercoricanis DSM 13633	1050201	PRJNA160105	160105	Terrabacteria group	Firmicutes	2.05288	37.8	-	ARAE01	1	1824	1717	4/22/13	4/17/17	Scaffold	JGI	SAMN02261259	GCA_000384195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/195/GCA_000384195.1_ASM38419v1	-	DSM 13633
Deferrisoma camini S3R1	1125863	PRJNA160107	160107	Proteobacteria	delta/epsilon subdivisions	4.23655	70.1	-	JAFN01	1	3708	3613	1/14/14	4/17/17	Contig	JGI	SAMN02584914	GCA_000526155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/155/GCA_000526155.1_ASM52615v1	-	S3R1
Oribacterium sp. oral taxon 078 str. F0262	608534	PRJNA33167	33167	Terrabacteria group	Firmicutes	2.67655	54.7	-	ACIQ02	12	2537	2373	4/2/09	4/7/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008845	GCA_000160135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/135/GCA_000160135.1_ASM16013v1	-	F0262
Oribacterium sinus F0268	585501	PRJNA34635	34635	Terrabacteria group	Firmicutes	2.70695	43.1	-	ACKX01	43	2413	2180	4/27/09	4/17/17	Scaffold	Baylor College of Medicine	SAMN00002241	GCA_000160635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/635/GCA_000160635.1_ASM16063v1	-	F0268
Candidatus Jettenia caeni	247490	PRJDB68	161117	PVC group	Planctomycetes	4.08735	40	-	BAFH01	4	3584	3469	4/25/12	4/17/17	Contig	Kyushu University	SAMD00036615	GCA_000296795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/795/GCA_000296795.1_ASM29679v1	22673575	-
Alcanivorax hongdengensis A-11-3	1177179	PRJNA161091	161091	Proteobacteria	Gammaproteobacteria	3.66488	60.7	-	AMRJ01	93	3452	3375	10/2/12	4/17/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02471206	GCA_000300995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/995/GCA_000300995.1_ASM30099v1	23209226	A-11-3
Jeongeupia sp. USM3	1906741	PRJNA345402	345402	Proteobacteria	Betaproteobacteria	3.78881	65.4	chromosome:NZ_CP017668.1/CP017668.1	-	1	3594	3455	10/21/16	4/13/17	Complete Genome	Universiti Sains Malaysia	SAMN05862066	GCA_001808185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/185/GCA_001808185.1_ASM180818v1	-	USM3
Catenovulum agarivorans YM01	659495	PRJNA158387	158387	Proteobacteria	Gammaproteobacteria	5.03268	40	-	AJWM01	70	4171	4013	7/23/12	5/18/17	Scaffold	Ocean University of China	SAMN02470761	GCA_000281085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/085/GCA_000281085.1_ASM28108v1	22965101	YM01
Alcanivorax jadensis T9	1177181	PRJNA161113	161113	Proteobacteria	Gammaproteobacteria	3.62937	58.4	-	ARXU01	30	3314	3236	9/23/14	4/17/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN03076214	GCA_000756655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/655/GCA_000756655.1_ASM75665v1	-	T9
Bacillus siamensis KCTC 13613	1177185	PRJNA161489	161489	Terrabacteria group	Firmicutes	3.7797	46.3	-	AJVF01	51	3798	3639	5/8/12	4/7/17	Contig	KRIBB	SAMN02414599	GCA_000262045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/045/GCA_000262045.1_KCTC_13613_01	22815459	KCTC 13613
Xanthomonas campestris	339	PRJNA280784	280784	Proteobacteria	Gammaproteobacteria	5.25486	65.4	chromosome:NZ_CP011256.1/CP011256.1	-	1	4626	4322	4/16/15	4/3/17	Complete Genome	Nanjing Agricultural University	SAMN03470070	GCA_000972745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/745/GCA_000972745.1_ASM97274v1	-	17
Bacillus aerophilus	293389	PRJNA273383	273383	Terrabacteria group	Firmicutes	3.75304	41.2	-	JXRO01	17	3896	3767	2/3/15	4/17/17	Contig	Instituto Gulbenkian de Ciencia	SAMN03290993	GCA_000831655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/655/GCA_000831655.1_ASM83165v1	25858824	C772
Thalassospira profundimaris WP0211	1177928	PRJNA161547	161547	Proteobacteria	Alphaproteobacteria	4.38023	55.2	-	AMRN01	28	4089	4018	9/28/12	5/19/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02471161	GCA_000300275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/275/GCA_000300275.1_ASM30027v1	23209215	WP0211
Methylosarcina lacus LW14	1114263	PRJNA161599	161599	Proteobacteria	Gammaproteobacteria	4.38492	54.7	-	AZUN01	1	3983	3796	1/3/14	4/17/17	Contig	JGI	SAMN02597192	GCA_000527095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/095/GCA_000527095.1_ASM52709v1	25767239	LW14
Amycolatopsis alba DSM 44262	1125972	PRJNA161649	161649	Terrabacteria group	Actinobacteria	9.81127	68.7	-	ARAF01	1	8906	8694	4/22/13	4/17/17	Scaffold	JGI	SAMN02261260	GCA_000384215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/215/GCA_000384215.1_ASM38421v1	-	DSM 44262
Thalassospira lucentensis MCCC 1A00383 = DSM 14000	1123365	PRJNA195822	195822	Proteobacteria	Alphaproteobacteria	4.74625	53.4	-	ATWN01	22	4396	4271	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02440903	GCA_000421265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/265/GCA_000421265.1_ASM42126v1	-	DSM 14000
Thalassospira tepidiphila MCCC 1A03514	1177930	PRJNA161579	161579	Proteobacteria	Alphaproteobacteria	4.41026	54.9	-	JPVZ01	27	4090	4011	6/14/16	4/17/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02927975	GCA_001662875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/875/GCA_001662875.1_ASM166287v1	-	MCCC 1A03514
Staphylococcus lentus F1142	1179226	PRJNA162453	162453	Terrabacteria group	Firmicutes	2.7868	31.8	-	AJXO01	169	2738	2563	8/10/12	4/7/17	Contig	Korea Food Research Institute	SAMN02470142	GCA_000286395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/395/GCA_000286395.1_StaLen1.0	23045498	F1142
Lysinibacillus boronitolerans JCM 21713 = 10a = NBRC 103108	1294264	PRJNA239541	239541	Terrabacteria group	Firmicutes	4.56415	37.6	-	JPVR01	81	4522	4385	11/6/14	4/9/17	Contig	Huazhong Agricultural University	SAMN02953211	GCA_000772935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/935/GCA_000772935.1_ASM77293v1	-	NBRC 103108
Dechlorosoma suillum PS	640081	PRJNA37693	37693	Proteobacteria	Betaproteobacteria	3.80698	65.4	chromosome:NC_016616.1/CP003153.1	-	1	3528	3425	12/5/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02232011	GCA_000236665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/665/GCA_000236665.1_ASM23666v1	22535943	PS
Rhodospirillum rubrum F11	1036743	PRJNA67413	67413	Proteobacteria	Alphaproteobacteria	4.35283	65.4	chromosome:NC_017584.1/CP003046.1	-	1	3920	3819	9/15/11	5/19/17	Complete Genome	Gonzaga University Department of Chemistry and Biochemistry	SAMN02603286	GCA_000225955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/955/GCA_000225955.1_ASM22595v1	22194448	F11
Azorhizobium doebereinerae UFLA1-100	1038858	PRJNA162983	162983	Proteobacteria	Alphaproteobacteria	5.81751	68.9	-	AXBA01	104	5398	5078	9/30/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440776	GCA_000473085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/085/GCA_000473085.1_ASM47308v1	-	UFLA1-100
alpha proteobacterium SCGC AAA027-C06	938624	PRJNA162995	162995	Proteobacteria	Alphaproteobacteria	0.775384	29.6	-	AQPD01	90	-	-	4/15/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02256512	GCA_000364545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/545/GCA_000364545.1_ASM36454v1	-	SCGC AAA027-C06
Flavobacterium antarcticum DSM 19726	1111730	PRJNA163029	163029	FCB group	Bacteroidetes/Chlorobi group	3.07904	35	-	ATTM01	15	2770	2702	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441252	GCA_000419685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/685/GCA_000419685.1_ASM41968v1	-	DSM 19726
Massilia alkalitolerans DSM 17462	1111733	PRJNA163031	163031	Proteobacteria	Betaproteobacteria	6.11168	65.3	-	ATYR01	75	5476	5256	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440881	GCA_000427785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/785/GCA_000427785.1_ASM42778v1	-	DSM 17462
Budvicia aquatica DSM 5075 = ATCC 35567	1111728	PRJNA163033	163033	Proteobacteria	Gammaproteobacteria	5.66873	45.8	-	ATYS01	120	5053	4820	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440598	GCA_000427805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/805/GCA_000427805.1_ASM42780v1	-	DSM 5075
Ignatzschineria larvae DSM 13226	1111732	PRJNA163035	163035	Proteobacteria	Gammaproteobacteria	2.4598	40.5	-	AZOD01	52	2084	1958	12/17/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02597183	GCA_000510805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/510/805/GCA_000510805.1_ASM51080v1	-	DSM 13226
Alicyclobacillus pomorum DSM 14955	1111479	PRJNA163039	163039	Terrabacteria group	Firmicutes	3.39856	53.7	-	AXAR01	36	3364	3171	9/30/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441451	GCA_000472905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/905/GCA_000472905.1_ASM47290v1	-	DSM 14955
Thermocrispum municipale DSM 44069	1111737	PRJNA163041	163041	Terrabacteria group	Actinobacteria	4.52642	68.9	-	ATYT01	27	4215	4058	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440599	GCA_000427825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/825/GCA_000427825.1_ASM42782v1	-	DSM 44069
Corynebacterium sputi DSM 45148	1111729	PRJNA163049	163049	Terrabacteria group	Actinobacteria	2.91768	61.5	-	ATYV01	39	2778	2619	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441223	GCA_000427865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/865/GCA_000427865.1_ASM42786v1	-	DSM 45148
Glycomyces tenuis DSM 44171	1111731	PRJNA163051	163051	Terrabacteria group	Actinobacteria	5.73529	70.4	-	ATYW01	44	5347	5149	7/15/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441561	GCA_000427885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/885/GCA_000427885.1_ASM42788v1	-	DSM 44171
Rhodopseudomonas palustris DX-1	652103	PRJNA38503	38503	Proteobacteria	Alphaproteobacteria	5.40412	65.4	chromosome:NC_014834.1/CP002418.1	-	1	5004	4874	12/29/10	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713571	GCA_000177255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/255/GCA_000177255.2_ASM17725v2	-	DX-1
Flavobacterium sp. URHB0058	1298868	PRJNA190843	190843	FCB group	Bacteroidetes/Chlorobi group	5.26426	33.7	-	AUEU01	31	4536	4417	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441186	GCA_000426145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/145/GCA_000426145.1_ASM42614v1	-	URHB0058
Bacillus altitudinis 41KF2b	1178544	PRJNA162773	162773	Terrabacteria group	Firmicutes	3.67894	41.3	-	ASJC01	39	3819	3716	5/15/14	4/9/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02746610	GCA_000691145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/145/GCA_000691145.1_ASM69114v1	-	41KF2b
Kocuria atrinae C3-8	1179225	PRJNA162451	162451	Terrabacteria group	Actinobacteria	3.19717	63.7	-	AJXN01	221	-	-	8/10/12	1/8/14	Contig	Korea Food Research Institute	SAMN02470141	GCA_000286355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/355/GCA_000286355.1_KocAtr1.0	23045503	C3-8
Streptomyces tsukubensis NRRL18488	1114943	PRJNA76771	76771	Terrabacteria group	Actinobacteria	7.6722	71.5	-	AJSZ01	958	6771	6090	4/30/12	3/11/17	Contig	INBIOTEC	SAMN02470052	GCA_000297155.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/155/GCA_000297155.2_ASM29715v2	22740677	NRRL18488
Thermocrispum agreste DSM 44070	1111738	PRJNA163053	163053	Terrabacteria group	Actinobacteria	4.19609	69.9	-	ATYX01	14	3777	3619	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441562	GCA_000427905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/905/GCA_000427905.1_ASM42790v1	-	DSM 44070
Mastigocoleus testarum BC008	371196	PRJNA300404	300404	Terrabacteria group	Cyanobacteria/Melainabacteria group	12.7002	37.3	-	LMTZ01	172	9298	8892	12/3/15	4/11/17	Contig	Arizona State University	SAMN04221293	GCA_001456025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/025/GCA_001456025.1_ASM145602v1	26823575	BC008
Pseudarthrobacter phenanthrenivorans Sphe3	930171	PRJNA20087	20087	Terrabacteria group	Actinobacteria	4.53532	65.3822	chromosome:NC_015145.1/CP002379.1; plasmid pASPHE301:NC_015146.1/CP002380.1; plasmid pASPHE302:NC_015147.1/CP002381.1	-	3	4269	4071	2/16/11	9/3/17	Complete Genome	US DOE Joint Genome Institute	SAMN00710681	GCA_000189535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/535/GCA_000189535.1_ASM18953v1	21677849	Sphe3
Bosea vaviloviae	1526658	PRJNA316801	316801	Proteobacteria	Alphaproteobacteria	6.71355	65.3684	chromosome:NZ_CP017147.1/CP017147.1; plasmid unnamed1:NZ_CP017148.1/CP017148.1	-	2	6271	6105	9/21/16	4/13/17	Complete Genome	All-Russia Research Institute for Agricultural Microbiology	SAMN05730837	GCA_001741865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/741/865/GCA_001741865.1_ASM174186v1	25603982	Vaf18
Corynebacterium atypicum	191610	PRJNA255205	255205	Terrabacteria group	Actinobacteria	2.35945	65.3513	chromosome:NZ_CP008944.1/CP008944.1; plasmid phiCATYP2070I:NZ_CP008945.1/CP008945.1	-	2	2125	1925	7/24/14	4/17/17	Complete Genome	Bielefeld University	SAMN02911287	GCA_000732945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/945/GCA_000732945.1_ASM73294v1	25146145	R2070
Rhodospirillum rubrum ATCC 11170	269796	PRJNA58	58	Proteobacteria	Alphaproteobacteria	4.40656	65.3317	chromosome:NC_007643.1/CP000230.1; plasmid unnamed:NC_007641.1/CP000231.1	-	2	3916	3837	12/12/05	8/3/16	Complete Genome	DOE Joint Genome Institute	SAMN02598538	GCA_000013085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/085/GCA_000013085.1_ASM1308v1	21886856	ATCC 11170
Pseudomonas resinovorans NBRC 106553	1245471	PRJDB685	178156	Proteobacteria	Gammaproteobacteria	6.48483	65.3177	chromosome:NC_021499.1/AP013068.1; plasmid pCAR1.3:NC_021506.1/AP013069.1	-	2	5916	5734	6/12/13	4/8/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00061053	GCA_000412695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/695/GCA_000412695.1_ASM41269v1	23887915	NBRC 106553
Rhizorhabdus dicambivorans	1850238	PRJNA403958	403958	Proteobacteria	Alphaproteobacteria	5.5413	65.3161	chromosome:CP023449.1; plasmid p1:CP023450.1; plasmid p2:CP023451.1; plasmid p3:CP023452.1; plasmid p4:CP023453.1	-	5	5272	5050	9/25/17	9/25/17	Complete Genome	Nanjing Agricultural University	SAMN07626873	GCA_002355275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/275/GCA_002355275.1_ASM235527v1	-	Ndbn-20
Halomonas sp. 1513	1883416	PRJNA361518	361518	Proteobacteria	Gammaproteobacteria	4.12952	65.3	chromosome:NZ_CP019326.1/CP019326.1	-	1	3778	3639	1/26/17	4/17/17	Complete Genome	Heilongjiang Academy of Agriculture Sciences	SAMN05417700	GCA_001971685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/685/GCA_001971685.1_ASM197168v1	-	1513
Acidovorax sp. RAC01	1842533	PRJNA319830	319830	Proteobacteria	Betaproteobacteria	4.57486	65.3	chromosome:NZ_CP016447.1/CP016447.1	-	1	4142	4006	8/26/16	4/13/17	Complete Genome	Los Alamos National Laboratory	SAMN04909706	GCA_001714725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/725/GCA_001714725.1_ASM171472v1	-	RAC01
Porphyrobacter neustonensis	1112	PRJNA322640	322640	Proteobacteria	Alphaproteobacteria	3.09036	65.3	chromosome:NZ_CP016033.1/CP016033.1	-	1	2886	2804	6/15/16	4/12/17	Complete Genome	"Second Institute of Oceanography, State Oceanic Administration"	SAMN05176187	GCA_001663175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/175/GCA_001663175.1_ASM166317v1	-	DSM 9434
Wenzhouxiangella marina	1579979	PRJNA288075	288075	Proteobacteria	Gammaproteobacteria	3.6752	65.3	chromosome:NZ_CP012154.1/CP012154.1	-	1	3105	3038	7/28/15	4/10/17	Complete Genome	Korea Research Institute of Bioscience and Biotechnology	SAMN03793171	GCA_001187785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/785/GCA_001187785.1_ASM118778v1	-	KCTC 42284
Xanthomonas campestris pv. campestris	340	PRJNA283327	283327	Proteobacteria	Gammaproteobacteria	4.91112	65.3	chromosome:NZ_CP012145.1/CP012145.1	-	1	4389	4039	7/24/15	4/4/17	Complete Genome	Lincoln University	SAMN03614209	GCA_001186415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/415/GCA_001186415.1_ASM118641v1	26514760	ICMP 21080
Xanthomonas campestris pv. campestris	340	PRJNA283326	283326	Proteobacteria	Gammaproteobacteria	4.90838	65.3	chromosome:NZ_CP012146.1/CP012146.1	-	1	4389	4040	7/24/15	4/4/17	Complete Genome	Lincoln University	SAMN03614208	GCA_001186465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/465/GCA_001186465.1_ASM118646v1	26514760	ICMP 4013
Xanthomonas campestris pv. raphani 756C	990315	PRJNA63187	63187	Proteobacteria	Gammaproteobacteria	4.94121	65.3	chromosome:NC_017271.1/CP002789.1	-	1	4372	4055	7/29/11	6/15/17	Complete Genome	Center for Bioinformatics and Computational Biology	SAMN02603062	GCA_000221965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/965/GCA_000221965.1_ASM22196v1	21784931	756C
Opitutus terrae PB90-1	452637	PRJNA19989	19989	PVC group	Verrucomicrobia	5.95761	65.3	chromosome:NC_010571.1/CP001032.1	-	1	4710	4572	4/8/08	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN00000285	GCA_000019965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/965/GCA_000019965.1_ASM1996v1	21398538	PB90-1
Verminephrobacter eiseniae EF01-2	391735	PRJNA17187	17187	Proteobacteria	Betaproteobacteria	5.59794	65.2627	chromosome:NC_008786.1/CP000542.1; plasmid pVEIS01:NC_008771.1/CP000543.1	-	2	5219	4757	1/9/07	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02598379	GCA_000015565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/565/GCA_000015565.1_ASM1556v1	-	EF01-2
Halobiforma lacisalsi AJ5	358396	PRJNA16192	16192	Euryarchaeota	Halobacteria	4.38154	65.2373	chromosome:NZ_CP019285.1/CP019285.1; plasmid pHLAJ5I:NZ_CP019286.1/CP019286.1; plasmid pHLAJ5II:NZ_CP019287.1/CP019287.1	-	3	4237	4088	1/12/17	4/17/17	Complete Genome	"College of Life Sciences, Zhejiang University"	SAMN02470038	GCA_000226975.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/975/GCA_000226975.3_ASM22697v3	22123770	AJ5
Escherichia sp. 3_2_53FAA	469598	PRJNA32465	32465	Proteobacteria	Gammaproteobacteria	5.15345	50.5	-	ACAC02	12	5466	5071	12/18/08	2/24/17	Scaffold	Broad Institute	SAMN02463704	GCA_000157115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/115/GCA_000157115.2_Escherichia_sp_3_2_53FAA_V2	-	3_2_53FAA
Marinovum algicola DG 898	988812	PRJNA63153	63153	Proteobacteria	Alphaproteobacteria	5.25239	65.2283	chromosome:NZ_CP010855.1/CP010855.1; plasmid pMaD1:NZ_CP010856.1/CP010856.1; plasmid pMaD10:NZ_CP010865.1/CP010865.1; plasmid pMaD11:NZ_CP010866.1/CP010866.1; plasmid pMaD2:NZ_CP010857.1/CP010857.1; plasmid pMaD3:NZ_CP010858.1/CP010858.1; plasmid pMaD4:NZ_CP010859.1/CP010859.1; plasmid pMaD5:NZ_CP010860.1/CP010860.1; plasmid pMaD6:NZ_CP010861.1/CP010861.1; plasmid pMaD7:NZ_CP010862.1/CP010862.1; plasmid pMaD8:NZ_CP010863.1/CP010863.1; plasmid pMaD9:NZ_CP010864.1/CP010864.1	-	12	5046	4910	7/6/15	4/10/17	Complete Genome	SFB/TTR51 Roseobacter	SAMN03840244	GCA_001046955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/955/GCA_001046955.1_ASM104695v1	26079637	DG 898
Bosea sp. PAMC 26642	1792307	PRJNA310377	310377	Proteobacteria	Alphaproteobacteria	5.51035	65.2016	chromosome:NZ_CP014301.1/CP014301.1; plasmid unnamed:NZ_CP014302.1/CP014302.1	-	2	5294	5153	2/17/16	4/12/17	Complete Genome	Korea Polar Research Institute	SAMN04451713	GCA_001562255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/255/GCA_001562255.1_ASM156225v1	-	PAMC 26642
Bradyrhizobium sp. ORS 285	115808	PRJEB20226	381898	Proteobacteria	Alphaproteobacteria	7.7971	65.2	chromosome BRAD285:NZ_LT859959.1/LT859959.1	-	1	7015	6749	6/2/17	6/12/17	Complete Genome	IRD	SAMEA103957792	GCA_900176205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/205/GCA_900176205.1_BRAD285_PRJEB202261_v1	-	ORS285
Nocardia sp. BMG111209	1160137	PRJNA185291	185291	Terrabacteria group	Actinobacteria	9.14314	69.2	-	ARMU01	5	8088	7893	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440989	GCA_000381925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/925/GCA_000381925.1_ASM38192v1	-	BMG111209
Erythrobacter litoralis	39960	PRJNA339618	339618	Proteobacteria	Alphaproteobacteria	3.25135	65.2	chromosome:NZ_CP017057.1/CP017057.1	-	1	3103	2999	9/6/16	4/13/17	Complete Genome	The University of Chicago	SAMN05601187	GCA_001719165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/165/GCA_001719165.1_ASM171916v1	-	DSM 8509
Pseudomonas sp. ATCC 13867	1294143	PRJNA189431	189431	Proteobacteria	Gammaproteobacteria	5.69631	65.2	chromosome:NC_020829.1/CP004143.1	-	1	5170	5019	3/29/13	5/19/17	Complete Genome	Pusan National University	SAMN02603735	GCA_000349845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/845/GCA_000349845.1_ASM34984v1	23723394	ATCC 13867
Desulfovibrio desulfuricans ND132	641491	PRJNA37769	37769	Proteobacteria	delta/epsilon subdivisions	3.85858	65.2	chromosome:NC_016803.1/CP003220.1	-	1	3501	3423	12/29/11	4/7/17	Complete Genome	US DOE Joint Genome Institute	SAMN02232015	GCA_000189295.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/295/GCA_000189295.2_ASM18929v2	21357488	ND132
Halopiger xanaduensis SH-6	797210	PRJNA56049	56049	Euryarchaeota	Halobacteria	4.35527	65.1966	chromosome:NC_015666.1/CP002839.1; plasmid pHALXA01:NC_015658.1/CP002840.1; plasmid pHALXA02:NC_015667.1/CP002841.1; plasmid pHALXA03:NC_015659.1/CP002842.1	-	4	4239	4087	6/9/11	5/18/17	Complete Genome	US DOE Joint Genome Institute	SAMN02232028	GCA_000217715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/715/GCA_000217715.1_ASM21771v1	22675596	SH-6
Bifidobacterium sp. 12_1_47BFAA	469594	PRJNA41959	41959	Terrabacteria group	Actinobacteria	2.40599	60.1	-	ADCN01	61	2184	1931	1/4/11	4/17/17	Scaffold	Broad Institute	SAMN02463822	GCA_000185665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/665/GCA_000185665.1_ASM18566v1	-	12_1_47BFAA
Mycobacterium sp. JS623	212767	PRJNA60055	60055	Terrabacteria group	Actinobacteria	7.22177	65.1624	chromosome:NC_019966.1/CP003078.1; plasmid pMYCSM01:NC_019957.1/CP003079.1; plasmid pMYCSM02:NC_019958.1/CP003080.1; plasmid pMYCSM03:NC_019959.1/CP003081.1	-	4	7130	6842	12/27/12	9/4/17	Complete Genome	JGI	SAMN02261384	GCA_000328565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/565/GCA_000328565.1_ASM32856v1	-	JS623
Novosphingobium aromaticivorans DSM 12444	279238	PRJNA204	204	Proteobacteria	Alphaproteobacteria	4.23331	65.1542	chromosome:NC_007794.1/CP000248.1; plasmid pNL1:NC_009426.1/CP000676.1; plasmid pNL2:NC_009427.1/CP000677.1	-	3	4032	3928	2/10/06	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598432	GCA_000013325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/325/GCA_000013325.1_ASM1332v1	-	DSM 12444
Nocardiopsis sp. CNS-639	1169153	PRJNA183361	183361	Terrabacteria group	Actinobacteria	6.84528	72.5	-	ARMI01	52	5855	5651	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441659	GCA_000381685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/685/GCA_000381685.1_ASM38168v1	-	CNS639
Gordonibacter massiliensis	1841863	PRJEB19975	379098	Terrabacteria group	Actinobacteria	3.94817	65.1	chromosome contig00001:NZ_LT827128.1/LT827128.1	-	1	3248	3132	3/21/17	3/24/17	Complete Genome	URMITE	SAMEA103910952	GCA_900170005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/005/GCA_900170005.1_PRJEB19975	-	Marseille-P2775
Herbaspirillum frisingense	92645	PRJNA357031	357031	Proteobacteria	Betaproteobacteria	5.44527	65.1	chromosome:NZ_CP018845.1/CP018845.1	-	1	4847	4747	3/13/17	3/15/17	Complete Genome	Harvard University	SAMN06130964	GCA_002025725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/725/GCA_002025725.1_ASM202572v1	28275097	AA6
Achromobacter insolitus	217204	PRJNA358463	358463	Proteobacteria	Betaproteobacteria	6.4927	65.1	chromosome:NZ_CP019325.1/CP019325.1	-	1	5980	5629	1/26/17	4/17/17	Complete Genome	Rice and Sorghum Research Institute	SAMN06174288	GCA_001971645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/645/GCA_001971645.1_ASM197164v1	-	DSM 23807
Pseudomonas oryzihabitans	47885	PRJNA281531	281531	Proteobacteria	Gammaproteobacteria	4.83436	65.1	chromosome:NZ_CP013987.1/CP013987.1	-	1	4439	4320	1/20/16	4/11/17	Complete Genome	USDA-ARS-USMARC	SAMN04158501	GCA_001518815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/815/GCA_001518815.1_ASM151881v1	-	USDA-ARS-USMARC-56511
endosymbiont of unidentified scaly snail isolate Monju	1248727	PRJDB691	231350	Proteobacteria	Gammaproteobacteria	2.59776	65.1	chromosome:NZ_AP012978.1/AP012978.1	-	1	2523	2313	8/15/13	4/10/17	Complete Genome	Japan Agency for Marine-Earth Science and Technology	SAMD00061055	GCA_000801295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/295/GCA_000801295.1_ASM80129v1	23924784	-
Bradyrhizobium oligotrophicum S58	1245469	PRJDB684	191613	Proteobacteria	Alphaproteobacteria	8.26417	65.1	chromosome:NC_020453.1/AP012603.1	-	1	7291	7061	3/1/13	5/10/17	Complete Genome	Tohoku University	SAMD00061052	GCA_000344805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/805/GCA_000344805.1_ASM34480v1	23396330	S58
Gillisia sp. Hel1_33_143	1336796	PRJEB16403	349409	FCB group	Bacteroidetes/Chlorobi group	3.47606	34.4	chromosome I:NZ_LT629737.1/LT629737.1	-	1	3206	3112	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04487764	GCA_900104765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/765/GCA_900104765.1_IMG-taxon_2634166549_annotated_assembly	-	Hel1_33_143
Thioalkalivibrio sulfidiphilus HL-EbGr7	396588	PRJNA29177	29177	Proteobacteria	Gammaproteobacteria	3.46455	65.1	chromosome:NC_011901.1/CP001339.1	-	1	3372	3258	1/13/09	8/28/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00001443	GCA_000021985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/985/GCA_000021985.1_ASM2198v1	21475584	HL-EbGR7
Magnetospirillum magneticum AMB-1	342108	PRJNA16217	16217	Proteobacteria	Alphaproteobacteria	4.96715	65.1	chromosome:NC_007626.1/AP007255.1	-	1	4695	4489	11/30/05	4/17/17	Complete Genome	"Tokyo University of Agriculture and Technology, Japan"	SAMD00061077	GCA_000009985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/985/GCA_000009985.1_ASM998v1	16303747	AMB-1
Xanthomonas campestris pv. campestris str. ATCC 33913	190485	PRJNA296	296	Proteobacteria	Gammaproteobacteria	5.07619	65.1	chromosome:NC_003902.1/AE008922.1	-	1	4240	4179	11/28/01	3/24/17	Complete Genome	Sao Paulo state (Brazil) Consortium	SAMN02603845	GCA_000007145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/145/GCA_000007145.1_ASM714v1	12024217	ATCC 33913
Mesorhizobium sp. B7	1670800	PRJNA354894	354894	Proteobacteria	Alphaproteobacteria	5.32456	65.0596	chromosome:NZ_CP018171.1/CP018171.1; plasmid unnamed1:NZ_CP018172.1/CP018172.1	-	2	5200	5025	12/6/16	4/16/17	Complete Genome	Zhejiang University	SAMN06054042	GCA_001889605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/605/GCA_001889605.1_ASM188960v1	-	B7
Thiomonas intermedia	926	PRJNA359731	359731	Proteobacteria	Betaproteobacteria	3.34343	65.0442	chromosome:NZ_CP020046.1/CP020046.1; plasmid pXI1:NZ_CP020047.1/CP020047.1	-	2	3118	3009	3/15/17	3/17/17	Complete Genome	China University of Petroleum	SAMN06197299	GCA_002028405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/405/GCA_002028405.1_ASM202840v1	-	ATCC 15466
Deinococcus sp. Leaf326	1736338	PRJNA297956	297956	Terrabacteria group	Deinococcus-Thermus	4.60208	67.4	-	LMOM01	108	4525	4289	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151728	GCA_001424185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/185/GCA_001424185.1_Leaf326	26633631	Leaf326
Sphingobium indicum B90A	861109	PRJNA50313	50313	Proteobacteria	Alphaproteobacteria	3.94573	65.0243	chromosome:NZ_CP013070.1/CP013070.1; plasmid pSRL1:NZ_CP013071.1/CP013071.1; plasmid pSRL2:NZ_CP013072.1/CP013072.1; plasmid pSRL3:NZ_CP013073.1/CP013073.1	-	4	3797	3648	12/12/16	4/17/17	Complete Genome	University of Delhi	SAMN02471717	GCA_000264945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/945/GCA_000264945.2_ASM26494v2	22843598	B90A
Azoarcus sp. KH32C	748247	PRJDB22	78183	Proteobacteria	Betaproteobacteria	5.81876	65.0239	chromosome:NC_020516.1/AP012304.1; plasmid pAZKH:NC_020548.1/AP012305.1	-	2	5272	5131	12/1/11	4/17/17	Complete Genome	"Laboratory of Soil Sciences, Department of Applied Biological Chemistry, Graducate School of Agricultural and Life Sciences, The University of Tokyo"	SAMD00061029	GCA_000349945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/945/GCA_000349945.1_ASM34994v1	-	KH32C
Cupriavidus basilensis	68895	PRJNA270374	270374	Proteobacteria	Betaproteobacteria	8.42148	65.0222	chromosome main:NZ_CP010536.1/CP010536.1; chromosome secondary:NZ_CP010537.1/CP010537.1	-	2	7645	7352	2/3/15	4/10/17	Complete Genome	Lawrence Berkeley National Laboratory	SAMN03263054	GCA_000832305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/305/GCA_000832305.1_ASM83230v1	25977418	4G11
Methylosinus sp. LW4	136993	PRJNA157217	157217	Proteobacteria	Alphaproteobacteria	4.82445	64.9	-	ARAB01	3	4452	4305	4/22/13	5/19/17	Scaffold	JGI	SAMN02261246	GCA_000379125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/125/GCA_000379125.1_ASM37912v1	-	LW4
Xanthomonas perforans 91-118	925776	PRJNA60021	60021	Proteobacteria	Gammaproteobacteria	4.89835	65	chromosome:NZ_CP019725.1/CP019725.1	-	1	4360	4074	2/14/17	2/23/17	Complete Genome	University of Florida	SAMN02471764	GCA_000192045.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/045/GCA_000192045.3_ASM19204v3	"2,139,610,826,089,810"	91-118
Methyloversatilis sp. RAC08	1842540	PRJNA319835	319835	Proteobacteria	Betaproteobacteria	3.93719	65	chromosome:NZ_CP016448.1/CP016448.1	-	1	3601	3503	8/25/16	4/13/17	Complete Genome	Los Alamos National Laboratory	SAMN04909717	GCA_001713355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/355/GCA_001713355.1_ASM171335v1	-	RAC08
Altererythrobacter namhicola	645517	PRJNA319016	319016	Proteobacteria	Alphaproteobacteria	2.59168	65	chromosome:NZ_CP016545.1/CP016545.1	-	1	2534	2472	7/20/16	4/17/17	Complete Genome	"Second Institute of Oceanography, State Oceanic Administration"	SAMN04870533	GCA_001687545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/545/GCA_001687545.1_ASM168754v1	-	JCM 16345
Citromicrobium sp. JL477	1634516	PRJNA279210	279210	Proteobacteria	Alphaproteobacteria	3.2585	65	chromosome:NZ_CP011344.1/CP011344.1	-	1	3192	3108	10/1/15	4/11/17	Complete Genome	Xiamen University	SAMN03438109	GCA_001304795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/795/GCA_001304795.1_ASM130479v1	-	JL477
Candidatus Aquiluna sp. UB-MaderosW2red	1855377	PRJEB15894	347951	Terrabacteria group	Actinobacteria	1.6639	51.9	chromosome I:NZ_LT627734.1/LT627734.1	-	1	1669	1606	10/17/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216534	GCA_900100865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/865/GCA_900100865.1_IMG-taxon_2675903689_annotated_assembly	-	UB-MaderosW2red
Cyanobacterium sp. IPPAS B-1200	1562720	PRJNA318169	318169	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.41025	37.7	-	LWHC01	136	3127	2939	9/27/16	4/13/17	Contig	"Institute of Plant Physiology, Russian Academy of Sciences"	SAMN04633587	GCA_001747005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/005/GCA_001747005.1_ASM174700v1	27856596	IPPAS B-1200
Oscillatoria sp. PCC 10802	1173028	PRJNA158815	158815	Terrabacteria group	Cyanobacteria/Melainabacteria group	8.59441	54.1	-	ANKO01	9	6997	6536	1/18/13	4/10/17	Scaffold	JGI	SAMN02261253	GCA_000332335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/335/GCA_000332335.1_ASM33233v1	-	PCC 10802
Dyella japonica A8	1217721	PRJNA254093	254093	Proteobacteria	Gammaproteobacteria	4.83118	65	chromosome:NZ_CP008884.1/CP008884.1	-	1	4157	4067	7/14/14	4/9/17	Complete Genome	The University of Hong Kong	SAMN02899689	GCA_000725385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/385/GCA_000725385.1_ASM72538v1	25395638	A8
Xanthomonas campestris pv. campestris	340	PRJNA29801	29801	Proteobacteria	Gammaproteobacteria	5.079	65	chromosome:NC_010688.1/AM920689.1	-	1	4542	4236	2/12/08	6/15/17	Complete Genome	Bielefeld Univ	SAMEA3138285	GCA_000070605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/070/605/GCA_000070605.1_ASM7060v1	18304669	B100
Rhodopseudomonas palustris BisB18	316056	PRJNA15750	15750	Proteobacteria	Alphaproteobacteria	5.51384	65	chromosome:NC_007925.1/CP000301.1	-	1	5000	4858	3/21/06	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02598337	GCA_000013745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/745/GCA_000013745.1_ASM1374v1	-	BisB18
Xanthomonas campestris pv. campestris str. 8004	314565	PRJNA15	15	Proteobacteria	Gammaproteobacteria	5.14871	65	chromosome:NC_007086.1/CP000050.1	-	1	4584	4297	5/25/05	6/15/17	Complete Genome	"Chinese National HGC, Shanghai"	SAMN02603125	GCA_000012105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/105/GCA_000012105.1_ASM1210v1	15899963	8004
Rhodopseudomonas palustris CGA009	258594	PRJNA57	57	Proteobacteria	Alphaproteobacteria	5.46764	64.9929	chromosome:NC_005296.1/BX571963.1; plasmid pRPA:NC_005297.1/BX571964.1	-	2	4996	4874	12/9/03	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMEA3138319	GCA_000195775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/775/GCA_000195775.1_ASM19577v1	14704707	CGA009
Corynebacterium ureicelerivorans	401472	PRJNA257688	257688	Terrabacteria group	Actinobacteria	2.32828	64.9917	chromosome:NZ_CP009215.1/CP009215.1; plasmid unnamed:NZ_CP009216.1/CP009216.1	-	2	2308	2182	9/3/14	4/17/17	Complete Genome	Bielefeld University	SAMN02953970	GCA_000747315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/315/GCA_000747315.1_ASM74731v1	25414509	IMMIB RIV-2301
Yangia sp. CCB-MM3	1792508	PRJNA310305	310305	Proteobacteria	Alphaproteobacteria	5.52206	64.9399	chromosome 1:NZ_CP014595.1/CP014595.1; chromosome 2:NZ_CP014596.1/CP014596.1; plasmid unnamed1:NZ_CP014597.1/CP014597.1; plasmid unnamed2:NZ_CP014598.1/CP014598.1; plasmid unnamed3:NZ_CP014599.1/CP014599.1; plasmid unnamed4:NZ_CP014600.1/CP014600.1; plasmid unnamed5:NZ_CP014601.1/CP014601.1	-	7	5092	4931	7/18/16	4/13/17	Complete Genome	Universiti Sains Malaysia	SAMN04450249	GCA_001687105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/105/GCA_001687105.1_ASM168710v1	-	CCB-MM3
Novosphingobium resinovorum	158500	PRJNA336270	336270	Proteobacteria	Alphaproteobacteria	6.91813	64.9171	chromosome:NZ_CP017075.1/CP017075.1; plasmid pSA1:NZ_CP017076.1/CP017076.1; plasmid pSA2:NZ_CP017077.1/CP017077.1; plasmid pSA3:NZ_CP017078.1/CP017078.1; plasmid pSA4:NZ_CP017079.1/CP017079.1	-	5	6407	6115	9/22/16	4/13/17	Complete Genome	University of Szeged	SAMN05507135	GCA_001742225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/225/GCA_001742225.1_ASM174222v1	-	SA1
Thermus scotoductus SA-01	743525	PRJNA46293	46293	Terrabacteria group	Deinococcus-Thermus	2.35519	64.9036	chromosome:NC_014974.1/CP001962.1; plasmid pTSC8:NC_014975.1/CP001963.1	-	2	2499	2396	1/27/11	4/7/17	Complete Genome	Georg-August-University Goettingen	SAMN02603261	GCA_000187005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/005/GCA_000187005.1_ASM18700v1	22115438	SA-01
Rhodococcus sp. B7740	1564114	PRJNA264767	264767	Terrabacteria group	Actinobacteria	5.34156	64.9	chromosome:NZ_CP010797.1/CP010797.1	-	1	5018	4875	3/17/15	4/10/17	Complete Genome	Zhejiang Wanli University	SAMN03140693	GCA_000954115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/954/115/GCA_000954115.1_ASM95411v1	25931596	B7740
Xenococcus sp. PCC 7305	102125	PRJNA159499	159499	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.92964	39.7	-	ALVZ01	234	5303	5059	1/17/13	5/19/17	Contig	JGI	SAMN02261354	GCA_000332055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/055/GCA_000332055.1_ASM33205v1	23277585	PCC 7305
Amycolatopsis sp. ATCC 39116	385957	PRJNA60885	60885	Terrabacteria group	Actinobacteria	8.39431	71.9	-	AFWY03	119	8198	7928	10/18/11	4/17/17	Contig	DOE Joint Genome Institute	SAMN00117521	GCA_000231075.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/075/GCA_000231075.3_ASM23107v3	22493203	75iv2
Pandoraea pnomenusa	93220	PRJNA261997	261997	Proteobacteria	Betaproteobacteria	5.38929	64.9	chromosome:NZ_CP009553.3/CP009553.3	-	1	4834	4659	10/22/14	4/5/17	Complete Genome	University of Malaya	SAMN03078809	GCA_000767615.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/615/GCA_000767615.3_ASM76761v3	-	DSM 16536
Paracoccus sp. J55	935849	PRJNA202354	202354	Proteobacteria	Alphaproteobacteria	4.29496	68.1	-	AZVA01	64	4185	4001	1/3/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02597205	GCA_000513975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/975/GCA_000513975.1_ASM51397v1	-	J55
Pandoraea pnomenusa	93220	PRJNA230133	230133	Proteobacteria	Betaproteobacteria	5.38595	64.9	chromosome:NC_023018.2/CP006938.2	-	1	4841	4678	12/9/13	4/6/17	Complete Genome	University of malaya	SAMN02427182	GCA_000504585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/585/GCA_000504585.2_ASM50458v2	24699956	RB-44
Acidovorax sp. KKS102	358220	PRJNA174596	174596	Proteobacteria	Betaproteobacteria	5.19693	64.9	chromosome:NC_018708.1/CP003872.1	-	1	4837	4672	10/3/12	5/18/17	Complete Genome	Tohoku University	SAMN02604069	GCA_000302535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/535/GCA_000302535.1_ASM30253v1	23209225	KKS102
Citreicella sp. SE45	501479	PRJNA37679	37679	Proteobacteria	Alphaproteobacteria	5.52323	67.4	-	ACNW01	9	5272	4945	5/12/09	5/18/17	Scaffold	Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436311	GCA_000161755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/755/GCA_000161755.1_ASM16175v1	-	SE45
Agrobacterium genomosp. 13 str. CFBP 6927	1183428	PRJEB12196	379236	Proteobacteria	Alphaproteobacteria	5.16159	59.3	-	FBWH01	2	4881	4722	3/16/17	4/3/17	Scaffold	Genoscope CEA	SAMEA3722819	GCA_900012615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/615/GCA_900012615.1_AHY_PRJEB12196_v1	-	CFBP 6927
Agrobacterium genomosp. 3 str. CFBP 6623	1183432	PRJEB12185	379245	Proteobacteria	Alphaproteobacteria	5.52931	59.1	-	FBWK01	4	5285	5072	3/16/17	4/3/17	Scaffold	Genoscope CEA	SAMEA3722808	GCA_900013535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/535/GCA_900013535.1_AHY_PRJEB12185_v1	-	CFBP 6623
Xanthomonas axonopodis pv. citrumelo F1	981368	PRJNA62495	62495	Proteobacteria	Gammaproteobacteria	4.96747	64.9	chromosome:NC_016010.1/CP002914.1	-	1	4376	4066	9/14/11	8/1/17	Complete Genome	University of Florida	SAMN02604170	GCA_000225915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/915/GCA_000225915.1_ASM22591v1	21908674	F1
Agrobacterium genomosp. 6 str. NCPPB 925	1183431	PRJEB12190	379242	Proteobacteria	Alphaproteobacteria	6.14598	59	-	FBWM01	6	5909	5596	3/16/17	4/3/17	Scaffold	Genoscope CEA	SAMEA3722813	GCA_900012625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/625/GCA_900012625.1_AHY_PRJEB12190_v1	-	NCPPB 925
Agrobacterium genomosp. 9 str. Hayward 0363	1183434	PRJEB12195	379239	Proteobacteria	Alphaproteobacteria	4.67916	59.4	-	FCNQ01	2	4416	4250	3/16/17	4/3/17	Scaffold	Genoscope CEA	SAMEA3722818	GCA_900012565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/565/GCA_900012565.1_AHY_PRJEB12195_v1	-	Hayward0363
Agrobacterium genomosp. 5 str. CFBP 6626	1183435	PRJEB12189	379243	Proteobacteria	Alphaproteobacteria	5.46793	59.4	-	FBWE01	4	5249	5044	3/16/17	4/10/17	Scaffold	Genoscope CEA	SAMEA3722812	GCA_900012595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/595/GCA_900012595.1_AHY_PRJEB12189_v1	-	CFBP 6626
Agrobacterium genomosp. 2 str. CFBP 5494	1183436	PRJEB12183	379250	Proteobacteria	Alphaproteobacteria	5.88452	59.2	-	FBVY01	5	5760	5469	3/16/17	4/3/17	Scaffold	Genoscope CEA	SAMEA3722807	GCA_900013495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/495/GCA_900013495.1_AHY_PRJEB12183_v1	-	CFBP 5494
Paraburkholderia mimosarum LMG 23256 = NBRC 106338	1038869	PRJNA163559	163559	Proteobacteria	Betaproteobacteria	8.41097	63.9	-	AXAN01	268	7688	7051	9/30/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440713	GCA_000472825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/825/GCA_000472825.1_ASM47282v1	-	LMG 23256
Epulopiscium sp. 'N.t. morphotype B'	420336	PRJNA20181	20181	Terrabacteria group	Firmicutes	2.68605	38.2	-	ABEQ01	92	2114	1959	8/8/07	4/17/17	Contig	J. Craig Venter Institute	SAMN02436323	GCA_000171335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/335/GCA_000171335.1_ASM17133v1	-	N.t. morphotype B
Erythrobacter sp. HL-111	1798193	PRJEB16397	349299	Proteobacteria	Alphaproteobacteria	3.19197	68.1	chromosome I:NZ_LT629743.1/LT629743.1	-	1	2999	2887	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04515621	GCA_900105095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/095/GCA_900105095.1_IMG-taxon_2623621020_annotated_assembly	-	HL-111
Lyngbya sp. PCC 8106	313612	PRJNA13409	13409	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.03751	41.1	-	AAVU01	110	5923	5572	12/15/06	4/17/17	Contig	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436090	GCA_000169095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/095/GCA_000169095.1_ASM16909v1	-	PCC 8106
Rhodopseudomonas palustris TIE-1	395960	PRJNA20167	20167	Proteobacteria	Alphaproteobacteria	5.74404	64.9	chromosome:NC_011004.1/CP001096.1	-	1	5338	5202	6/23/08	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000049	GCA_000020445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/445/GCA_000020445.1_ASM2044v1	-	TIE-1
Agrobacterium genomosp. 7 str. NCPPB 1641	1183425	PRJEB12191	379241	Proteobacteria	Alphaproteobacteria	6.18071	59.5	-	FCNP01	4	5836	5597	3/16/17	4/3/17	Scaffold	Genoscope CEA	SAMEA3722814	GCA_900012585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/585/GCA_900012585.1_AHY_PRJEB12191_v1	-	NCPPB 1641
Agrobacterium genomosp. 1 str. TT111	1183430	PRJEB12182	379248	Proteobacteria	Alphaproteobacteria	5.9285	58.4	-	FBWA01	4	5621	5376	3/16/17	4/3/17	Scaffold	Genoscope CEA	SAMEA3722806	GCA_900012575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/575/GCA_900012575.1_AHY_PRJEB12182_v1	-	TT111
Sphingobium japonicum UT26S	452662	PRJDA19949	19949	Proteobacteria	Alphaproteobacteria	4.42486	64.8793	chromosome 1:NC_014006.1/AP010803.1; chromosome 2:NC_014013.1/AP010804.1; plasmid pCHQ1:NC_014007.1/AP010805.1; plasmid pUT1:NC_014005.1/AP010806.1; plasmid pUT2:NC_014009.1/AP010807.1	-	5	4232	4087	4/1/10	4/7/17	Complete Genome	National Institute of Technology and Evaluation (NITE)	SAMD00060927	GCA_000091125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/091/125/GCA_000091125.1_ASM9112v1	20817768	UT26S
Sphingopyxis macrogoltabida	33050	PRJNA260764	260764	Proteobacteria	Alphaproteobacteria	5.74862	64.8131	chromosome:NZ_CP009429.1/CP009429.1; plasmid unnamed:NZ_CP009431.1/CP009431.1; plasmid unnamed:NZ_CP009430.1/CP009430.1	-	3	5550	5368	10/14/15	4/11/17	Complete Genome	Tohoku university	SAMN03031197	GCA_001314325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/325/GCA_001314325.1_ASM131432v1	-	203
Pseudomonas psychrotolerans	237610	PRJNA345321	345321	Proteobacteria	Gammaproteobacteria	5.38617	64.8064	chromosome:NZ_CP018758.1/CP018758.1; plasmid pPRS08-11306:NZ_CP018759.1/CP018759.1	-	2	4929	4785	12/21/16	4/6/17	Complete Genome	Zhejiang Sci-Tech University	SAMN05860868	GCA_001913135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/135/GCA_001913135.1_ASM191313v1	-	PRS08-11306
Mycobacterium saopaulense	1578165	PRJNA268854	268854	Terrabacteria group	Actinobacteria	4.64917	64.8	chromosome:NZ_CP010271.1/CP010271.1	-	1	4600	4470	12/3/15	6/24/17	Complete Genome	Universidade de Sao Paulo	SAMN03225541	GCA_001456355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/355/GCA_001456355.1_ASM145635v1	-	EPM10906
Devosia sp. H5989	1643450	PRJNA281416	281416	Proteobacteria	Alphaproteobacteria	4.59425	64.8	chromosome:NZ_CP011300.1/CP011300.1	-	1	4505	4418	7/22/15	4/10/17	Complete Genome	CDC	SAMN03487588	GCA_001185205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/205/GCA_001185205.1_ASM118520v1	26337876	H5989
Pandoraea pnomenusa	93220	PRJNA242373	242373	Proteobacteria	Betaproteobacteria	5.37892	64.8	chromosome:NZ_CP007506.3/CP007506.3	-	1	4786	4626	3/28/14	4/5/17	Complete Genome	University of Malaya	SAMN02693467	GCA_000604065.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/065/GCA_000604065.3_ASM60406v3	-	RB38
Moritella sp. PE36	58051	PRJNA13535	13535	Proteobacteria	Gammaproteobacteria	5.22309	41	-	ABCQ01	131	4771	4422	6/26/07	5/19/17	Contig	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436150	GCA_000170855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/855/GCA_000170855.1_ASM17085v1	-	PE36
Nitrobacter sp. Nb-311A	314253	PRJNA13538	13538	Proteobacteria	Alphaproteobacteria	4.10728	60.4	-	AAMY01	44	3962	3635	1/24/06	5/19/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436084	GCA_000152905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/905/GCA_000152905.1_ASM15290v1	-	Nb-311A
Janibacter sp. HTCC2649	313589	PRJNA13546	13546	Terrabacteria group	Actinobacteria	4.23507	68.4	-	AAMN01	7	4040	3937	1/5/06	5/18/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN00622971	GCA_000152705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/705/GCA_000152705.1_ASM15270v1	21075932	HTCC2649
Photobacterium sp. SKA34	121723	PRJNA13566	13566	Proteobacteria	Gammaproteobacteria	4.99277	39.6	-	AAOU01	18	4515	4106	3/1/06	5/19/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436115	GCA_000153325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/325/GCA_000153325.1_ASM15332v1	-	SKA34
Roseovarius sp. 217	314264	PRJNA13576	13576	Proteobacteria	Alphaproteobacteria	4.77074	60.8	-	AAMV01	6	4655	4482	1/23/06	5/19/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436164	GCA_000152845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/845/GCA_000152845.1_ASM15284v1	-	217
Rhodopseudomonas palustris BisB5	316057	PRJNA15749	15749	Proteobacteria	Alphaproteobacteria	4.89272	64.8	chromosome:NC_007958.1/CP000283.1	-	1	4482	4362	4/10/06	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02598336	GCA_000013685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/685/GCA_000013685.1_ASM1368v1	-	BisB5
Roseobacter sp. MED193	314262	PRJNA13590	13590	Proteobacteria	Alphaproteobacteria	4.67407	57.4	-	AANB01	4	4443	4313	1/27/06	5/19/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436137	GCA_000152965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/965/GCA_000152965.1_ASM15296v1	-	MED193
Chromobacterium violaceum ATCC 12472	243365	PRJNA444	444	Proteobacteria	Betaproteobacteria	4.75108	64.8	chromosome:NC_005085.1/AE016825.1	-	1	4438	4245	8/22/03	5/18/17	Complete Genome	"LNCC, Brazil"	SAMN02603528	GCA_000007705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/705/GCA_000007705.1_ASM770v1	14500782	ATCC 12472
Shinella sp. HZN7	879274	PRJNA321376	321376	Proteobacteria	Alphaproteobacteria	7.35425	64.7972	chromosome:NZ_CP015736.1/CP015736.1; plasmid pShin-01:NZ_CP015737.1/CP015737.1; plasmid pShin-02:NZ_CP015738.1/CP015738.1; plasmid pShin-03:NZ_CP015739.1/CP015739.1; plasmid pShin-04:NZ_CP015740.1/CP015740.1; plasmid pShin-05:NZ_CP015741.1/CP015741.1; plasmid pShin-06:NZ_CP015742.1/CP015742.1; plasmid pShin-07:NZ_CP015743.1/CP015743.1; plasmid pShin-08:NZ_CP015744.1/CP015744.1; plasmid pShin-09:NZ_CP015745.1/CP015745.1; plasmid pShin-10:NZ_CP015746.1/CP015746.1; plasmid pShin-11:NZ_CP015747.1/CP015747.1; plasmid pShin-12:NZ_CP015748.1/CP015748.1	-	13	7032	6722	5/26/16	4/17/17	Complete Genome	Nanjing Agricultural University	SAMN04992853	GCA_001652565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/565/GCA_001652565.1_ASM165256v1	27625640	HZN7
Bradyrhizobium sp. BTAi1	288000	PRJNA16137	16137	Proteobacteria	Alphaproteobacteria	8.49351	64.7868	chromosome:NC_009485.1/CP000494.1; plasmid pBBta01:NC_009475.1/CP000495.1	-	2	7716	7496	5/11/07	5/18/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598359	GCA_000015165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/165/GCA_000015165.1_ASM1516v1	17540897	BTAi1
Xanthomonas fuscans subsp. aurantifolii	76802	PRJNA273983	273983	Proteobacteria	Gammaproteobacteria	4.96209	64.7699	chromosome:NZ_CP012002.1/CP012002.1; plasmid unnamed:NZ_CP012003.1/CP012003.1	-	2	4499	4027	4/5/16	6/24/17	Complete Genome	UNESP-FCAV	SAMN03835495	GCA_001610915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/915/GCA_001610915.1_ASM161091v1	-	1566
Xanthomonas citri subsp. citri	611301	PRJNA255042	255042	Proteobacteria	Gammaproteobacteria	5.2674	64.7417	chromosome:NZ_CP009007.1/CP009007.1; plasmid pXAC33:NZ_CP009005.1/CP009005.1; plasmid pXAC64:NZ_CP009006.1/CP009006.1	-	3	4755	4416	3/24/15	4/3/17	Complete Genome	"Citrus Research and Education center, Univerisity of Florida"	SAMN02911847	GCA_000961275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/275/GCA_000961275.1_ASM96127v1	25689023	mf20
Xanthomonas citri subsp. citri	611301	PRJNA255042	255042	Proteobacteria	Gammaproteobacteria	5.26734	64.7417	chromosome:NZ_CP009022.1/CP009022.1; plasmid pXAC33:NZ_CP009020.1/CP009020.1; plasmid pXAC64:NZ_CP009021.1/CP009021.1	-	3	4755	4417	3/24/15	4/3/17	Complete Genome	"Citrus Research and Education center, Univerisity of Florida"	SAMN02911846	GCA_000961375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/375/GCA_000961375.1_ASM96137v1	25689023	FB19
Xanthomonas citri subsp. citri	611301	PRJNA255042	255042	Proteobacteria	Gammaproteobacteria	5.2674	64.7417	chromosome:NZ_CP009025.1/CP009025.1; plasmid pXAC33:NZ_CP009023.1/CP009023.1; plasmid pXAC64:NZ_CP009024.1/CP009024.1	-	3	4754	4415	3/24/15	4/3/17	Complete Genome	"Citrus Research and Education center, Univerisity of Florida"	SAMN02911845	GCA_000961395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/395/GCA_000961395.1_ASM96139v1	25689023	BL18
Xanthomonas citri subsp. citri	611301	PRJNA255042	255042	Proteobacteria	Gammaproteobacteria	5.26925	64.7412	chromosome:NZ_CP008995.1/CP008995.1; plasmid pXAC33:NZ_CP008993.1/CP008993.1; plasmid pXAC64:NZ_CP008994.1/CP008994.1	-	3	4758	4418	3/24/15	4/3/17	Complete Genome	"Citrus Research and Education center, Univerisity of Florida"	SAMN02911844	GCA_000961195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/195/GCA_000961195.1_ASM96119v1	25689023	NT17
Xanthomonas citri subsp. citri	611301	PRJNA255042	255042	Proteobacteria	Gammaproteobacteria	5.26922	64.7412	chromosome:NZ_CP009028.1/CP009028.1; plasmid pXAC33:NZ_CP009026.1/CP009026.1; plasmid pXAC64:NZ_CP009027.1/CP009027.1	-	3	4756	4417	3/24/15	4/3/17	Complete Genome	"Citrus Research and Education center, Univerisity of Florida"	SAMN02911840	GCA_000961415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/415/GCA_000961415.1_ASM96141v1	25689023	5208
Brevibacillus sp. Leaf182	1736290	PRJNA297956	297956	Terrabacteria group	Firmicutes	6.46504	47.3	-	LMPN01	34	6089	5787	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151670	GCA_001423865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/865/GCA_001423865.1_Leaf182	26633631	Leaf182
Acaryochloris sp. CCMEE 5410	310037	PRJNA16707	16707	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.87548	47.1	-	AFEJ01	511	7463	6708	6/3/11	5/18/17	Contig	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN00016772	GCA_000238775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/775/GCA_000238775.2_ASM23877v2	21697100	CCMEE 5410
Xanthomonas citri subsp. citri A306	1308541	PRJNA193618	193618	Proteobacteria	Gammaproteobacteria	5.27417	64.7396	chromosome:NZ_CP006857.1/CP006857.1; plasmid pXAC33:NZ_CP006855.1/CP006855.1; plasmid pXAC64:NZ_CP006856.1/CP006856.1	-	3	4763	4419	1/9/15	4/2/17	Complete Genome	"CREC, University of Florida"	SAMN03278355	GCA_000816885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/885/GCA_000816885.1_ASM81688v1	-	A306
Eubacterium sp. 3_1_31	457402	PRJNA39375	39375	Terrabacteria group	Firmicutes	3.09846	38	-	ACTL01	3	2919	2805	1/12/12	4/10/17	Scaffold	Broad Institute	SAMN02463770	GCA_000242955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/955/GCA_000242955.1_Eubact_sp_3_1_31_V1	-	3_1_31
Xanthomonas axonopodis pv. citri str. 306	190486	PRJNA297	297	Proteobacteria	Gammaproteobacteria	5.27417	64.7396	chromosome:NC_003919.1/AE008923.1; plasmid pXAC33:NC_003921.3/AE008924.1; plasmid pXAC64:NC_003922.1/AE008925.1	-	3	4764	4430	11/28/01	6/15/17	Complete Genome	Sao Paulo state (Brazil) Consortium	SAMN02603846	GCA_000007165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/165/GCA_000007165.1_ASM716v1	12024217	306
Xanthomonas citri subsp. citri	611301	PRJNA286060	286060	Proteobacteria	Gammaproteobacteria	5.22335	64.739	chromosome:NZ_CP011827.2/CP011827.2; plasmid pXAC33:NZ_CP013665.1/CP013665.1; plasmid pXAC64:NZ_CP013664.1/CP013664.1	-	3	4725	4385	6/16/15	4/10/17	Complete Genome	South China Agricultural University	SAMN03765509	GCA_001028285.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/285/GCA_001028285.3_ASM102828v3	-	jx-6
Beggiatoa sp. SS	422288	PRJNA18685	18685	Proteobacteria	Gammaproteobacteria	1.33417	43.3	-	ABBY01	1090	1440	1437	7/18/07	1/8/14	Contig	Center for Genomic Sciences	SAMN02470513	GCA_000170695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/695/GCA_000170695.1_ASM17069v1	-	-
Xanthomonas citri subsp. citri	611301	PRJNA255042	255042	Proteobacteria	Gammaproteobacteria	5.22229	64.739	chromosome:NZ_CP008989.1/CP008989.1; plasmid pXAC33:NZ_CP008987.1/CP008987.1; plasmid pXAC64:NZ_CP008988.1/CP008988.1	-	3	4727	4396	3/24/15	4/3/17	Complete Genome	"Citrus Research and Education center, Univerisity of Florida"	SAMN02911839	GCA_000961155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/155/GCA_000961155.1_ASM96115v1	25689023	UI7
Xanthomonas citri subsp. citri UI6	1308548	PRJNA255042	255042	Proteobacteria	Gammaproteobacteria	5.22243	64.739	chromosome:NZ_CP008992.1/CP008992.1; plasmid pXAC33:NZ_CP008990.1/CP008990.1; plasmid pXAC64:NZ_CP008991.1/CP008991.1	-	3	4723	4385	3/24/15	4/3/17	Complete Genome	"Citrus Research and Education center, Univerisity of Florida"	SAMN02911838	GCA_000961175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/175/GCA_000961175.1_ASM96117v1	25689023	UI6
Xanthomonas citri subsp. citri	611301	PRJNA255042	255042	Proteobacteria	Gammaproteobacteria	5.22342	64.739	chromosome:NZ_CP009010.1/CP009010.1; plasmid pXAC33:NZ_CP009008.1/CP009008.1; plasmid pXAC64:NZ_CP009009.1/CP009009.1	-	3	4727	4392	3/24/15	4/3/17	Complete Genome	"Citrus Research and Education center, Univerisity of Florida"	SAMN02911837	GCA_000961295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/295/GCA_000961295.1_ASM96129v1	25689023	jx5
Xanthomonas citri subsp. citri	611301	PRJNA255042	255042	Proteobacteria	Gammaproteobacteria	5.2234	64.739	chromosome:NZ_CP009013.1/CP009013.1; plasmid pXAC33:NZ_CP009011.1/CP009011.1; plasmid pXAC64:NZ_CP009012.1/CP009012.1	-	3	4726	4391	3/24/15	4/3/17	Complete Genome	"Citrus Research and Education center, Univerisity of Florida"	SAMN02911836	GCA_000961315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/315/GCA_000961315.1_ASM96131v1	25689023	jx4
Xanthomonas citri subsp. citri	611301	PRJNA255042	255042	Proteobacteria	Gammaproteobacteria	5.22375	64.739	chromosome:NZ_CP009016.1/CP009016.1; plasmid pXAC33:NZ_CP009014.1/CP009014.1; plasmid pXAC64:NZ_CP009015.1/CP009015.1	-	3	4726	4394	3/24/15	4/3/17	Complete Genome	"Citrus Research and Education center, Univerisity of Florida"	SAMN02911835	GCA_000961335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/335/GCA_000961335.1_ASM96133v1	25689023	gd3
Xanthomonas citri subsp. citri	611301	PRJNA255042	255042	Proteobacteria	Gammaproteobacteria	5.22375	64.739	chromosome:NZ_CP009019.1/CP009019.1; plasmid pXAC33:NZ_CP009017.1/CP009017.1; plasmid pXAC64:NZ_CP009018.1/CP009018.1	-	3	4726	4394	3/24/15	4/3/17	Complete Genome	"Citrus Research and Education center, Univerisity of Florida"	SAMN02911834	GCA_000961355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/355/GCA_000961355.1_ASM96135v1	25689023	gd2
Hydrogenivirga sp. 128-5-R1-1	392423	PRJNA19313	19313	Aquificae	Aquificae	3.03824	43.8	-	ABHJ01	551	3525	3091	11/9/07	4/17/17	Contig	The Gordon and Betty Moore Foundation Microbial Genome Sequencing project	SAMN02436118	GCA_000171895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/895/GCA_000171895.1_ASM17189v1	-	128-5-R1-1
Limnobacter sp. MED105	391597	PRJNA19317	19317	Proteobacteria	Betaproteobacteria	3.39027	52.2	-	ABCT01	46	3188	3095	6/26/07	4/17/17	Contig	The Gordon and Betty Moore Foundation Microbial Genome Sequencing project	SAMN02436153	GCA_000170915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/915/GCA_000170915.1_ASM17091v1	-	MED105
Xanthomonas citri subsp. citri	611301	PRJNA255042	255042	Proteobacteria	Gammaproteobacteria	5.22225	64.7386	chromosome:NZ_CP008998.1/CP008998.1; plasmid pXAC33:NZ_CP008996.1/CP008996.1; plasmid pXAC64:NZ_CP008997.1/CP008997.1	-	3	4723	4393	3/24/15	4/3/17	Complete Genome	"Citrus Research and Education center, Univerisity of Florida"	SAMN02911843	GCA_000961215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/215/GCA_000961215.1_ASM96121v1	25689023	MN12
Pseudovibrio sp. FO-BEG1	911045	PRJNA73563	73563	Proteobacteria	Alphaproteobacteria	5.91678	52.4149	chromosome:NC_016642.1/CP003147.1; plasmid unnamed:NC_016646.1/CP003148.1	-	2	5349	5232	12/5/11	5/19/17	Chromosome	Max Planck Institute for Marine Microbiology	SAMN02261085	GCA_000236645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/645/GCA_000236645.1_ASM23664v1	23601235	FO-BEG1
Xanthomonas citri subsp. citri	611301	PRJNA255042	255042	Proteobacteria	Gammaproteobacteria	5.22094	64.7386	chromosome:NZ_CP009001.1/CP009001.1; plasmid pXAC33:NZ_CP008999.1/CP008999.1; plasmid pXAC64:NZ_CP009000.1/CP009000.1	-	3	4722	4392	3/24/15	4/3/17	Complete Genome	"Citrus Research and Education center, Univerisity of Florida"	SAMN02911842	GCA_000961235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/235/GCA_000961235.1_ASM96123v1	25689023	MN11
Xanthomonas citri subsp. citri	611301	PRJNA255042	255042	Proteobacteria	Gammaproteobacteria	5.22227	64.7386	chromosome:NZ_CP009004.1/CP009004.1; plasmid pXAC33:NZ_CP009002.1/CP009002.1; plasmid pXAC64:NZ_CP009003.1/CP009003.1	-	3	4726	4390	3/24/15	4/3/17	Complete Genome	"Citrus Research and Education center, Univerisity of Florida"	SAMN02911841	GCA_000961255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/255/GCA_000961255.1_ASM96125v1	25689023	MN10
Corynebacterium glyciniphilum AJ 3170	1404245	PRJNA221205	221205	Terrabacteria group	Actinobacteria	3.56822	64.7345	chromosome:NZ_CP006842.1/CP006842.1; plasmid pCgly1:NZ_CP006843.1/CP006843.1	-	2	3322	3205	4/11/14	4/9/17	Complete Genome	Bielefeld University	SAMN03081498	GCA_000626675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/675/GCA_000626675.1_ASM62667v1	25323597	AJ 3170
Xanthomonas fuscans subsp. aurantifolii	76802	PRJNA273983	273983	Proteobacteria	Gammaproteobacteria	5.27968	64.729	chromosome:NZ_CP011163.1/CP011163.1; plasmid pXfc32:NZ_CP011165.1/CP011165.1; plasmid pXfc37:NZ_CP011164.1/CP011164.1; plasmid pXfc46:NZ_CP011166.1/CP011166.1	-	4	4829	4289	4/5/16	6/24/17	Complete Genome	UNESP-FCAV	SAMN03317027	GCA_001610815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/815/GCA_001610815.1_ASM161081v1	-	FDC 1609
Xanthomonas axonopodis Xac29-1	1304892	PRJNA193074	193074	Proteobacteria	Gammaproteobacteria	5.29652	64.7171	chromosome:NC_020800.1/CP004399.1; plasmid pXAC33:NC_020801.1/CP004402.1; plasmid pXAC47:NC_020798.1/CP004401.1; plasmid pXAC64:NC_020797.1/CP004400.1	-	4	4808	4389	3/22/13	6/15/17	Complete Genome	Shanghai Jiao Tong University	SAMN02603863	GCA_000348585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/585/GCA_000348585.1_ASM34858v1	-	Xac29-1
Ruminococcus sp. JC304	1095771	PRJEA82615	82615	Terrabacteria group	Firmicutes	5.17721	41.1	-	CAHL01	53	4111	3530	5/4/12	5/19/17	Scaffold	URMITE CNRS UMR 6236 IRD 198	SAMEA2272026	GCA_000285855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/855/GCA_000285855.2_ASM28585v2	-	-
Xanthomonas fuscans subsp. fuscans	366649	PRJNA176873	176873	Proteobacteria	Gammaproteobacteria	5.08868	64.7132	chromosome:NC_022541.1/FO681494.1; plasmid pla:NC_022539.1/FO681495.1; plasmid plb:NC_022540.1/FO681496.1; plasmid plc:NC_022542.1/FO681497.1	-	4	4550	4074	10/11/13	4/11/17	Complete Genome	FNX (French Network on xanthomonads)	SAMEA3283112	GCA_000969685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/685/GCA_000969685.1_ASM96968v1	24195767	4834-R
Bacteroides sp. 2_2_4	469590	PRJNA32439	32439	FCB group	Bacteroidetes/Chlorobi group	7.10122	42.2	-	ABZZ01	64	5798	5438	1/30/09	5/18/17	Scaffold	Broad Institute	SAMN02463692	GCA_000157055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/055/GCA_000157055.1_ASM15705v1	-	2_2_4
Xanthomonas citri pv. vignicola	473426	PRJNA390890	390890	Proteobacteria	Gammaproteobacteria	5.1052	64.7	chromosome:NZ_CP022270.1/CP022270.1	-	1	4551	4074	7/13/17	7/15/17	Complete Genome	IRHS	SAMN07251989	GCA_002218285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/285/GCA_002218285.1_ASM221828v1	-	CFBP7113
Luteibacter rhizovicinus DSM 16549	1440763	PRJNA344944	344944	Proteobacteria	Gammaproteobacteria	4.76549	64.7	chromosome:CP017480.1	-	1	4345	4247	11/30/16	11/30/16	Complete Genome	QualityWheat	SAMN05853519	GCA_001887595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/595/GCA_001887595.1_ASM188759v1	-	LJ96T
Porphyrobacter sp. LM 6	1896196	PRJNA340879	340879	Proteobacteria	Alphaproteobacteria	2.97926	64.7	chromosome:NZ_CP017113.1/CP017113.1	-	1	2895	2795	9/7/16	4/13/17	Complete Genome	The University of Chicago	SAMN05714719	GCA_001720465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/465/GCA_001720465.1_ASM172046v1	-	LM 6
Rhodococcus sp. PBTS 2	1653479	PRJNA313428	313428	Terrabacteria group	Actinobacteria	5.31695	64.7	chromosome:NZ_CP015220.1/CP015220.1; plasmid unnamed1:NZ_CP015221.1/CP015221.1	-	2	4985	4864	4/13/16	4/12/17	Complete Genome	New Mexico State University	SAMN04519625	GCA_001620005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/005/GCA_001620005.1_ASM162000v1	27284129	PBTS 2
Altererythrobacter marensis	543877	PRJNA286057	286057	Proteobacteria	Alphaproteobacteria	2.88503	64.7	chromosome:NZ_CP011805.1/CP011805.1	-	1	2738	2665	6/12/15	4/10/17	Complete Genome	Korea Research Institute of Bioscience and Biotechnology	SAMN03764476	GCA_001028625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/625/GCA_001028625.1_ASM102862v1	-	KCTC 22370
Pseudomonas balearica DSM 6083	1123016	PRJNA240670	240670	Proteobacteria	Gammaproteobacteria	4.38348	64.7	chromosome:NZ_CP007511.1/CP007511.1	-	1	4126	3956	1/14/15	4/10/17	Complete Genome	MICROGEN. Microbial Comparative Genomics	SAMN02673660	GCA_000818015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/015/GCA_000818015.1_ASM81801v1	27103708	DSM6083 (=SP1402)
Ferroplasma sp. Type II	261388	PRJNA209807	209807	Euryarchaeota	Thermoplasmata	2.48765	37.6	-	ATDU01	177	2736	2736	8/14/13	8/11/14	Scaffold	DOE Joint Genome Institute	SAMN02981542	GCA_000496155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/155/GCA_000496155.1_fer2	23865623	-
Tolypothrix sp. PCC 7601	1188	PRJNA72337	72337	Terrabacteria group	Cyanobacteria/Melainabacteria group	9.97514	40.7	-	AGCR01	43	8123	7629	9/28/12	4/8/17	Scaffold	The Genome Institute	SAMN03450030	GCA_000300115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/115/GCA_000300115.1_Fremyella_diplosiphon-2.0.1	25953173	UTEX B 481
Coprobacillus sp. D7	556270	PRJNA32495	32495	Terrabacteria group	Firmicutes	3.52773	31.4	-	ACDT02	37	3511	3114	2/18/09	4/17/17	Scaffold	Broad Institute	SAMN02595286	GCA_000158555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/555/GCA_000158555.2_Erys_bact_D7_V2	-	D7
Pandoraea pnomenusa 3kgm	1416914	PRJNA226227	226227	Proteobacteria	Betaproteobacteria	5.4293	64.7	chromosome:NC_022904.2/CP006900.2	-	1	4886	4716	11/25/13	4/2/17	Complete Genome	UNIVERSITY OF MALAYA	SAMN02401957	GCA_000590495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/495/GCA_000590495.2_ASM59049v2	24812228	3kgm
Pararhodospirillum photometricum DSM 122	1150469	PRJEA81611	81611	Proteobacteria	Alphaproteobacteria	3.87629	64.7	chromosome DSM 122:NC_017059.1/HE663493.1	-	1	3539	3203	2/23/12	4/8/17	Complete Genome	CNRS	SAMEA2272054	GCA_000284415.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/415/GCA_000284415.2_ASM28441v2	-	DSM 122
Fusobacterium sp. oral taxon 203	671211	PRJNA282954	282954	Fusobacteria	Fusobacteriia	2.12695	27.5	chromosome:NZ_CP016200.1/CP016200.1	-	1	2092	1902	8/8/17	8/10/17	Chromosome	The Forsyth Institute	SAMN03897723	GCA_002243405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/405/GCA_002243405.1_ASM224340v1	-	W7671
Olsenella uli DSM 7084	633147	PRJNA36641	36641	Terrabacteria group	Actinobacteria	2.0519	64.7	chromosome:NC_014363.1/CP002106.1	-	1	1812	1737	7/26/10	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00016989	GCA_000143845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/143/845/GCA_000143845.1_ASM14384v1	21304694	DSM 7084
Pseudomonas mendocina ymp	399739	PRJNA17457	17457	Proteobacteria	Gammaproteobacteria	5.07281	64.7	chromosome:NC_009439.1/CP000680.1	-	1	4714	4569	4/20/07	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598392	GCA_000016565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/565/GCA_000016565.1_ASM1656v1	-	ymp
Pseudarthrobacter sulfonivorans	121292	PRJNA305788	305788	Terrabacteria group	Actinobacteria	5.05615	64.6794	chromosome:NZ_CP013747.1/CP013747.1; plasmid unnamed:NZ_CP013748.1/CP013748.1	-	2	4642	4440	1/4/16	4/16/17	Complete Genome	Chinese Academy of Sciences	SAMN04332703	GCA_001484605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/605/GCA_001484605.1_ASM148460v1	-	Ar51
Kutzneria sp. 744	345341	PRJNA38053	38053	Terrabacteria group	Actinobacteria	11.6465	69.4	-	ACQP01	1	10675	9544	2/10/14	4/17/17	Scaffold	Broad Institute	SAMN00013041	GCA_000568255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/255/GCA_000568255.1_ASM56825v1	-	744
Aromatoleum aromaticum EbN1	76114	PRJNA13242	13242	Proteobacteria	Betaproteobacteria	4.72726	64.6764	chromosome:NC_006513.1/CR555306.1; plasmid 1:NC_006823.1/CR555307.1; plasmid 2:NC_006824.1/CR555308.1	-	3	4561	4359	12/2/04	5/18/17	Complete Genome	Max Planck Institute	SAMEA3138218	GCA_000025965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/965/GCA_000025965.1_ASM2596v1	"1,555,105,915,687,210"	EbN1
Xanthomonas citri subsp. citri	611301	PRJNA255042	255042	Proteobacteria	Gammaproteobacteria	5.39833	64.6642	chromosome:NZ_CP009031.1/CP009031.1; plasmid pXCAW19:NZ_CP009029.1/CP009029.1; plasmid pXCAW58:NZ_CP009030.1/CP009030.1	-	3	4904	4526	3/24/15	4/3/17	Complete Genome	"Citrus Research and Education center, Univerisity of Florida"	SAMN02911848	GCA_000961435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/435/GCA_000961435.1_ASM96143v1	25689023	AW13
Xanthomonas citri subsp. citri	611301	PRJNA255042	255042	Proteobacteria	Gammaproteobacteria	5.39833	64.6642	chromosome:NZ_CP009034.1/CP009034.1; plasmid pXCAW19:NZ_CP009032.1/CP009032.1; plasmid pXCAW58:NZ_CP009033.1/CP009033.1	-	3	4905	4523	3/24/15	4/3/17	Complete Genome	"Citrus Research and Education center, Univerisity of Florida"	SAMN02911849	GCA_000961455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/455/GCA_000961455.1_ASM96145v1	25689023	AW14
Xanthomonas citri subsp. citri	611301	PRJNA255042	255042	Proteobacteria	Gammaproteobacteria	5.39833	64.6642	chromosome:NZ_CP009037.1/CP009037.1; plasmid pXCAW19:NZ_CP009035.1/CP009035.1; plasmid pXCAW58:NZ_CP009036.1/CP009036.1	-	3	4905	4526	3/24/15	4/3/17	Complete Genome	"Citrus Research and Education center, Univerisity of Florida"	SAMN02911850	GCA_000961475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/475/GCA_000961475.1_ASM96147v1	25689023	AW15
Xanthomonas citri subsp. citri	611301	PRJNA255042	255042	Proteobacteria	Gammaproteobacteria	5.39826	64.6642	chromosome:NZ_CP009040.1/CP009040.1; plasmid pXCAW19:NZ_CP009038.1/CP009038.1; plasmid pXCAW58:NZ_CP009039.1/CP009039.1	-	3	4907	4530	3/24/15	4/3/17	Complete Genome	"Citrus Research and Education center, Univerisity of Florida"	SAMN02911851	GCA_000961495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/495/GCA_000961495.1_ASM96149v1	25689023	AW16
Xanthomonas citri subsp. citri Aw12879	1137651	PRJNA81931	81931	Proteobacteria	Gammaproteobacteria	5.39869	64.6642	chromosome:NC_020815.1/CP003778.1; plasmid pXcaw19:NC_020816.1/CP003779.1; plasmid pXcaw58:NC_020817.1/CP003780.1	-	3	4908	4522	3/26/13	6/15/17	Complete Genome	"CREC, University of Florida"	SAMN02603165	GCA_000349225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/225/GCA_000349225.1_ASM34922v1	23682143	Aw12879
Dermacoccus sp. PE3	1641401	PRJNA280804	280804	Terrabacteria group	Actinobacteria	3.07499	68.3	-	LDCM01	14	2898	2782	6/8/15	4/10/17	Contig	Institute of Genomics and Integrative Biology	SAMN03470203	GCA_001021715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/715/GCA_001021715.1_ASM102171v1	-	PE3
Acidaminococcus sp. HPA0509	1203555	PRJNA169431	169431	Terrabacteria group	Firmicutes	2.28786	49.9	-	ATBZ01	1	2161	2038	6/14/13	4/17/17	Scaffold	Broad Institute	SAMN02596974	GCA_000411395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/395/GCA_000411395.1_Acid_sp_HPA0509_V1	-	HPA0509
Dorea sp. 5-2	1235798	PRJNA175992	175992	Terrabacteria group	Firmicutes	6.14581	46.1	-	ASTD01	80	5903	5382	5/29/13	4/8/17	Scaffold	Broad Institute	SAMN01731000	GCA_000403455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/455/GCA_000403455.2_Dore_bact_5-2_V1	-	2-May
Ralstonia sp. 5_7_47FAA	658664	PRJNA39415	39415	Proteobacteria	Betaproteobacteria	5.24982	63.6	-	ACUF01	32	5010	4759	10/18/10	5/19/17	Scaffold	Broad Institute	SAMN02463782	GCA_000165085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/165/085/GCA_000165085.1_ASM16508v1	-	5_7_47FAA
Rhodovulum sp. P5	1564506	PRJNA316381	316381	Proteobacteria	Alphaproteobacteria	4.47354	64.6513	chromosome:NZ_CP015039.1/CP015039.1; plasmid pRGUI01:NZ_CP015040.1/CP015040.1; plasmid pRGUI02:NZ_CP015041.1/CP015041.1; plasmid pRGUI03:NZ_CP015042.1/CP015042.1; plasmid pRGUI04:NZ_CP015043.1/CP015043.1	-	5	4208	4022	4/5/17	4/8/17	Complete Genome	Xiamen University	SAMN04579687	GCA_002079305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/305/GCA_002079305.1_ASM207930v1	-	P5
Xanthomonas fuscans subsp. aurantifolii	76802	PRJNA273983	273983	Proteobacteria	Gammaproteobacteria	5.27265	64.6507	chromosome:NZ_CP011160.1/CP011160.1; plasmid pXfc38:NZ_CP011162.1/CP011162.1; plasmid pXfc43:NZ_CP011161.1/CP011161.1	-	3	4838	4301	4/5/16	6/24/17	Complete Genome	UNESP-FCAV	SAMN03317020	GCA_001610795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/795/GCA_001610795.1_ASM161079v1	-	FDC 1559
Alistipes sp. ZOR0009	1339253	PRJNA205590	205590	FCB group	Bacteroidetes/Chlorobi group	4.44549	43.1	-	JTLD01	125	3782	3661	12/8/14	4/9/17	Scaffold	University of Oregon	SAMN03021524	GCA_000798815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/815/GCA_000798815.1_ZOR0009.1	-	ZOR0009
Xanthomonas citri subsp. citri	611301	PRJNA381640	381640	Proteobacteria	Gammaproteobacteria	5.50141	64.6493	chromosome:NZ_CP020882.1/CP020882.1; plasmid unnamed1:NZ_CP020883.1/CP020883.1; plasmid unnamed2:NZ_CP020884.1/CP020884.1	-	3	5064	4662	5/15/17	6/15/17	Complete Genome	University of Florida	SAMN06685652	GCA_002139975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/975/GCA_002139975.1_ASM213997v1	-	TX160042
Xanthomonas citri subsp. malvacearum	86040	PRJNA396899	396899	Proteobacteria	Gammaproteobacteria	5.14471	64.6479	chromosome:NZ_CP023159.1/CP023159.1; plasmid unnamed1:NZ_CP023160.1/CP023160.1; plasmid unnamed2:NZ_CP023161.1/CP023161.1; plasmid unnamed3:NZ_CP023162.1/CP023162.1	-	4	4625	4145	9/8/17	9/11/17	Complete Genome	Donald Danforth Plant Science Center	SAMN07447517	GCA_002288585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/585/GCA_002288585.1_ASM228858v1	-	MS14003
Porphyromonas sp. oral taxon 278 str. W7784	1227272	PRJNA173940	173940	FCB group	Bacteroidetes/Chlorobi group	2.15822	55.6	-	AWUX01	38	1702	1611	9/16/13	4/16/17	Scaffold	Washington University	SAMN02436880	GCA_000467855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/855/GCA_000467855.2_ASM46785v2	-	W7784
Phascolarctobacterium sp. CAG:266	1262915	PRJEB798	206743	Terrabacteria group	Firmicutes	1.82032	45.6	-	CBDN01	77	1822	1778	5/31/13	1/30/15	Scaffold	DTU	SAMEA2272541	GCA_000436095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/095/GCA_000436095.1_MGS266	-	-
Synergistes sp. 3_1_syn1	457415	PRJNA39419	39419	Synergistetes	Synergistia	3.28726	56	-	ACUH01	8	3028	2883	12/16/11	4/17/17	Scaffold	Broad Institute	SAMN02463783	GCA_000238615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/615/GCA_000238615.1_Synerg_sp_3_1_syn1_V1	-	3_1_syn1
Anaerostipes sp. 3_2_56FAA	665937	PRJNA39999	39999	Terrabacteria group	Firmicutes	3.28632	44.4	-	ACWB01	13	3370	2963	1/4/11	4/17/17	Scaffold	Broad Institute	SAMN02463785	GCA_000185825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/825/GCA_000185825.1_ASM18582v1	-	3_2_56FAA
Sphingopyxis macrogoltabida	33050	PRJNA295243	295243	Proteobacteria	Alphaproteobacteria	5.09855	64.6475	chromosome:NZ_CP012700.1/CP012700.1; plasmid 1:NZ_CP012701.1/CP012701.1; plasmid 2:NZ_CP012702.1/CP012702.1; plasmid 3:NZ_CP012703.1/CP012703.1; plasmid 4:NZ_CP012704.1/CP012704.1; plasmid 5:NZ_CP012705.1/CP012705.1	-	6	4830	4676	10/6/15	4/17/17	Complete Genome	Kyoto Institute of Technology	SAMN04044495	GCA_001307295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/295/GCA_001307295.1_ASM130729v1	26634754	EY-1
Xanthomonas citri pv. vignicola	473426	PRJNA390892	390892	Proteobacteria	Gammaproteobacteria	5.156	64.6467	chromosome:NZ_CP022267.1/CP022267.1; plasmid plA:NZ_CP022268.1/CP022268.1; plasmid plB:NZ_CP022269.1/CP022269.1	-	3	4556	4119	7/13/17	7/15/17	Complete Genome	IRHS	SAMN07252091	GCA_002218265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/265/GCA_002218265.1_ASM221826v1	-	CFBP7112
Xanthomonas citri subsp. citri	611301	PRJNA381640	381640	Proteobacteria	Gammaproteobacteria	5.51442	64.6457	chromosome:NZ_CP020889.1/CP020889.1; plasmid unnamed1:NZ_CP020890.1/CP020890.1; plasmid unnamed2:NZ_CP020891.1/CP020891.1	-	3	5078	4672	5/15/17	6/15/17	Complete Genome	University of Florida	SAMN06685696	GCA_002139995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/995/GCA_002139995.1_ASM213999v1	-	TX160197
Sphingopyxis macrogoltabida	33050	PRJNA303954	303954	Proteobacteria	Alphaproteobacteria	5.95315	64.6428	chromosome:NZ_CP013344.1/CP013344.1; plasmid unnamed1:NZ_CP013345.1/CP013345.1; plasmid unnamed2:NZ_CP013346.1/CP013346.1	-	3	5742	5551	4/5/16	4/12/17	Complete Genome	Kyoto Institute of Technology	SAMN04288116	GCA_001610995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/995/GCA_001610995.1_ASM161099v1	27284142	203N
Xanthomonas citri subsp. malvacearum	86040	PRJNA299817	299817	Proteobacteria	Gammaproteobacteria	5.12394	64.642	chromosome:NZ_CP017020.1/CP017020.1; plasmid pMSCT15kb:NZ_CP017021.1/CP017021.1; plasmid pMSCT44kb:NZ_CP017022.1/CP017022.1; plasmid pMSCT60kb:NZ_CP017023.1/CP017023.1	-	4	4600	4078	9/6/16	4/11/17	Complete Genome	Mississippi State University	SAMN05595756	GCA_001719145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/145/GCA_001719145.1_ASM171914v1	-	MSCT
Bilophila sp. 4_1_30	693988	PRJNA41961	41961	Proteobacteria	delta/epsilon subdivisions	4.61831	59	-	ADCO01	69	4093	3752	8/29/11	5/18/17	Scaffold	Broad Institute	SAMN02463823	GCA_000224655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/655/GCA_000224655.1_Bilophila_sp_4_1_30_V1	-	4_1_30
Natronococcus occultus SP4	694430	PRJNA46985	46985	Euryarchaeota	Halobacteria	4.31412	64.6294	chromosome:NC_019974.1/CP003929.1; plasmid 1:NC_019975.1/CP003930.1; plasmid 2:NC_019976.1/CP003931.1	-	3	4242	4035	12/28/12	5/19/17	Complete Genome	JGI	SAMN02261263	GCA_000328685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/685/GCA_000328685.1_ASM32868v1	-	SP4
Veillonella sp. 3_1_44	457416	PRJNA41975	41975	Terrabacteria group	Firmicutes	2.16346	38.7	-	ADCV01	16	1952	1867	3/30/10	4/17/17	Scaffold	Broad Institute	SAMN02463830	GCA_000163715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/715/GCA_000163715.1_ASM16371v1	-	3_1_44
Brenneria sp. EniD312	598467	PRJNA42935	42935	Proteobacteria	Gammaproteobacteria	4.94377	55.9	chromosome:NZ_CM001230.1/CM001230.1	AFWW01	1	4641	4391	9/7/11	4/17/17	Chromosome	DOE Joint Genome Institute	SAMN02256539	GCA_000225565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/565/GCA_000225565.1_ASM22556v1	-	EniD312
Xanthomonas citri subsp. citri	611301	PRJNA381640	381640	Proteobacteria	Gammaproteobacteria	5.57542	64.6184	chromosome:NZ_CP020885.1/CP020885.1; plasmid unnamed1:NZ_CP020886.1/CP020886.1; plasmid unnamed2:NZ_CP020887.1/CP020887.1; plasmid unnamed3:NZ_CP020888.1/CP020888.1	-	4	5111	4694	5/15/17	6/15/17	Complete Genome	University of Florida	SAMN06685654	GCA_002139955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/955/GCA_002139955.1_ASM213995v1	-	TX160149
Coprococcus sp. HPP0074	1078090	PRJNA72499	72499	Terrabacteria group	Firmicutes	2.97614	41.2	-	AGEV01	6	2921	2752	6/13/13	4/8/17	Scaffold	Broad Institute	SAMN02596736	GCA_000411335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/335/GCA_000411335.1_Copr_sp_HPP0074_V1	-	HPP0074
Xanthomonas perforans	442694	PRJNA344031	344031	Proteobacteria	Gammaproteobacteria	5.34642	64.6165	chromosome:NZ_CP018475.1/CP018475.1; plasmid pLH3.1:NZ_CP018472.1/CP018472.1; plasmid pLH3.2:NZ_CP018476.1/CP018476.1; plasmid pLH3.3:NZ_CP018474.1/CP018474.1; plasmid pLH3.4:NZ_CP018473.1/CP018473.1	-	5	4818	4488	12/19/16	4/6/17	Complete Genome	cirad	SAMN05823509	GCA_001908855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/855/GCA_001908855.1_ASM190885v1	-	LH3
Collinsella sp. 4_8_47FAA	742722	PRJNA46367	46367	Terrabacteria group	Actinobacteria	2.27937	60	-	ADLA01	40	2059	1870	10/3/14	4/17/17	Scaffold	Broad Institute	SAMN00103554	GCA_000763055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/055/GCA_000763055.1_Collinsella_sp_4_8_47FAA_V1	-	4_8_47FAA
Roseibium sp. TrichSKD4	744980	PRJNA46497	46497	Proteobacteria	Alphaproteobacteria	5.69689	53.8	-	AEFL01	28	5639	5240	9/27/10	5/19/17	Scaffold	Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436310	GCA_000148725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/725/GCA_000148725.1_ASM14872v1	-	TrichSKD4
Thalassospira sp. TSL5-1	1544451	PRJNA260654	260654	Proteobacteria	Alphaproteobacteria	4.97955	54	-	JRJD01	27	4470	4379	12/15/16	4/16/17	Scaffold	Tsinghua University	SAMN03024555	GCA_001907695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/695/GCA_001907695.1_ASM190769v1	-	TSL5-1
Subdoligranulum sp. 4_3_54A2FAA	665956	PRJNA40041	40041	Terrabacteria group	Firmicutes	4.21454	56.1	-	ACWW01	10	4244	3998	12/16/11	6/19/17	Scaffold	Broad Institute	SAMN02463804	GCA_000238635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/635/GCA_000238635.1_Subdol_sp_4_3_54A2FAA_V1	-	4_3_54A2FAA
Arthrospira sp. PCC 8005	376219	PRJNA40633	40633	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.22815	44.7	chromosome:NZ_FO818640.1/FO818640.1	-	1	6095	5293	2/14/14	4/10/17	Chromosome	"SCK-CEN, Belgian Nuclear Research Center/Genoscope"	SAMEA3283116	GCA_000973065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/065/GCA_000973065.1_ASM97306v1	-	PCC 8005
Phormidium sp. HE10JO	1765956	PRJEB18681	375997	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.81902	51.3	-	FSSI02	104	4173	3916	2/21/17	6/10/17	Scaffold	KIT	SAMEA33079168	GCA_900149785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/785/GCA_900149785.2_Phormidium_lacuna	-	-
Ahrensia sp. 13_GOM-1096m	1380380	PRJNA213768	213768	Proteobacteria	Alphaproteobacteria	3.40596	48.1	-	JIAX01	14	3321	3230	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743941	GCA_000620605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/605/GCA_000620605.1_ASM62060v1	-	13_GOM-1096m
Pandoraea pnomenusa	93220	PRJNA319140	319140	Proteobacteria	Betaproteobacteria	5.81983	64.6124	chromosome:NZ_CP015371.1/CP015371.1; plasmid unnamed 1:NZ_CP015372.1/CP015372.1; plasmid unnamed 2:NZ_CP015373.1/CP015373.1; plasmid unnamed 3:NZ_CP015374.1/CP015374.1	-	4	5252	4940	5/3/16	4/5/17	Complete Genome	"Wuhan Institute of Virology, Chinese Academy of Sciences"	SAMN04889867	GCA_001636275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/275/GCA_001636275.1_ASM163627v1	-	MCB032
Loktanella sp. S4079	579483	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	3.55764	54.3	-	JXYE01	43	3505	3428	4/1/15	4/17/17	Contig	Technical University of Denmark	SAMN03323958	GCA_000967725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/725/GCA_000967725.1_S4079	25879706	S4079
Bifidobacterium scardovii JCM 12489 = DSM 13734	1150461	PRJDB62	275716	Terrabacteria group	Actinobacteria	3.15835	64.6	chromosome Unknown:NZ_AP012331.1/AP012331.1	-	1	2557	2397	2/17/15	4/10/17	Complete Genome	"Graduate School of Frontier Sciences, University of Tokyo"	SAMD00061046	GCA_001042635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/635/GCA_001042635.1_ASM104263v1	25858848	JCM 12489
Afipia sp. GAS231	1882747	PRJEB16208	348960	Proteobacteria	Alphaproteobacteria	7.58424	62.6	chromosome I:NZ_LT629703.1/LT629703.1	-	1	7081	6899	10/20/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05444050	GCA_900103365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/365/GCA_900103365.1_IMG-taxon_2690315678_annotated_assembly	-	GAS231
Sphingopyxis terrae NBRC 15098	1219058	PRJNA295353	295353	Proteobacteria	Alphaproteobacteria	3.98341	64.5923	chromosome:NZ_CP013342.1/CP013342.1; plasmid unnamed:NZ_CP013343.1/CP013343.1	-	2	3814	3680	4/5/16	4/12/17	Complete Genome	Kyoto Institute of Technology	SAMN04046241	GCA_001610975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/975/GCA_001610975.1_ASM161097v1	27284143	203-1
Haemophilus sp. oral taxon 851 str. F0397	762965	PRJNA48495	48495	Proteobacteria	Gammaproteobacteria	1.83862	38.3	-	AGRK01	21	1794	1680	1/10/12	4/17/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN02299433	GCA_000242295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/295/GCA_000242295.1_ASM24229v1	-	F0397
Xanthomonas citri pv. glycines str. 8ra	1401257	PRJNA341902	341902	Proteobacteria	Gammaproteobacteria	5.39019	64.5842	chromosome:NZ_CP017188.1/CP017188.1; plasmid p_XAG_1:NZ_CP017189.1/CP017189.1	-	2	4856	4461	10/26/16	4/5/17	Complete Genome	Chung Ang University	SAMN05722944	GCA_001854145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/145/GCA_001854145.1_ASM185414v1	-	8ra
Aerococcus sp. HMSC23C02	1581058	PRJNA269827	269827	Terrabacteria group	Firmicutes	2.09944	47.4	-	LWOV01	30	1904	1819	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436208	GCA_001806805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/805/GCA_001806805.1_ASM180680v1	-	HMSC23C02
Rhodococcus fascians D188	1051973	PRJNA313428	313428	Terrabacteria group	Actinobacteria	5.50211	64.584	chromosome:NZ_CP015235.1/CP015235.1; plasmid pFiD188:NZ_CP015236.1/CP015236.1; plasmid unnamed2:NZ_CP015237.1/CP015237.1	-	3	5149	5015	4/14/16	4/5/17	Complete Genome	New Mexico State University	SAMN04521220	GCA_001620305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/305/GCA_001620305.1_ASM162030v1	27284129	D188
Xanthomonas citri subsp. malvacearum	86040	PRJNA298765	298765	Proteobacteria	Gammaproteobacteria	5.30085	64.5734	chromosome:NZ_CP013004.1/CP013004.1; plasmid pXcmH:NZ_CP013005.1/CP013005.1	-	2	4756	4236	7/24/17	7/28/17	Complete Genome	Cornell University	SAMN04166563	GCA_002224525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/525/GCA_002224525.1_ASM222452v1	-	XcmH1005
Thiomonas sp. FB-6	1158291	PRJNA178046	178046	Proteobacteria	Betaproteobacteria	4.20467	70	-	ARIS01	79	3958	3784	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441003	GCA_000377645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/645/GCA_000377645.1_ASM37764v1	-	FB-6
Rhodanobacter sp. OR444	1076525	PRJNA76967	76967	Proteobacteria	Gammaproteobacteria	3.99694	67.1	-	ATYD01	105	3610	3260	7/15/13	4/8/17	Scaffold	JGI	SAMN02440895	GCA_000427505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/505/GCA_000427505.1_ASM42750v1	-	OR444
Rothia sp. HMSC08A08	1581132	PRJNA269901	269901	Terrabacteria group	Actinobacteria	2.48681	53.9	-	LWNC01	36	2180	2055	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03434238	GCA_001808385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/385/GCA_001808385.1_ASM180838v1	-	HMSC08A08
Acidithiobacillus sp. GGI-221	872330	PRJNA51403	51403	Proteobacteria	Acidithiobacillia	3.17493	58.6	-	AEFB01	1602	4079	4007	9/3/10	1/8/14	Contig	Gujarat Genomics Initiative	SAMN02469859	GCA_000179815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/815/GCA_000179815.2_ASM17981v2	-	GGI-221
Xanthomonas citri subsp. malvacearum	86040	PRJNA396899	396899	Proteobacteria	Gammaproteobacteria	5.40885	64.5397	chromosome:NZ_CP023155.1/CP023155.1; plasmid unnamed1:NZ_CP023156.1/CP023156.1; plasmid unnamed2:NZ_CP023157.1/CP023157.1; plasmid unnamed3:NZ_CP023158.1/CP023158.1	-	4	4931	4364	9/8/17	9/11/17	Complete Genome	Donald Danforth Plant Science Center	SAMN07447516	GCA_002288565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/565/GCA_002288565.1_ASM228856v1	-	AR81009
Xanthomonas citri subsp. citri	611301	PRJNA344031	344031	Proteobacteria	Gammaproteobacteria	5.46333	64.5232	chromosome:NZ_CP018858.1/CP018858.1; plasmid pLH201.1:NZ_CP018859.1/CP018859.1; plasmid pLH201.2:NZ_CP018860.1/CP018860.1	-	3	4960	4590	12/27/16	4/6/17	Complete Genome	cirad	SAMN05823148	GCA_001922105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/105/GCA_001922105.1_ASM192210v1	-	LH201
Tepidanaerobacter sp. EBM-38	1918496	PRJNA315143	315143	Terrabacteria group	Firmicutes	2.39137	37.7	-	MPOT01	108	-	-	12/9/16	12/9/16	Contig	UC Berkeley	SAMN06018808	GCA_001896545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/545/GCA_001896545.1_ASM189654v1	-	-
Candidatus Nanosalinarum sp. J07AB56	889962	PRJNA52645	52645	DPANN group	Candidatus Nanohaloarchaeota	1.2158	55.4	-	AEIX01	3	1450	1407	7/6/11	3/11/13	Scaffold	"University of California, San Diego, Scripps Institution of Oceanography"	SAMN01940911	GCA_000220355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/355/GCA_000220355.1_ASM22035v1	21716304	-
Candidatus Nanosalina sp. J07AB43	889948	PRJNA52647	52647	DPANN group	Candidatus Nanohaloarchaeota	1.22716	43.6	-	AEIY01	7	1738	1677	7/6/11	3/11/13	Scaffold	"University of California, San Diego, Scripps Institution of Oceanography"	SAMN01940911	GCA_000220375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/375/GCA_000220375.1_ASM22037v1	21716304	-
Xanthomonas citri subsp. citri	611301	PRJNA344031	344031	Proteobacteria	Gammaproteobacteria	5.47167	64.5165	chromosome:NZ_CP018847.1/CP018847.1; plasmid pLL074-4.1:NZ_CP018848.1/CP018848.1; plasmid pLL074-4.2:NZ_CP018849.1/CP018849.1	-	3	4972	4619	12/27/16	4/6/17	Complete Genome	cirad	SAMN05823143	GCA_001922045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/045/GCA_001922045.1_ASM192204v1	-	LL074-4
Sulfitobacter sp. AM1-D1	1917485	PRJNA353330	353330	Proteobacteria	Alphaproteobacteria	4.69101	64.5153	chromosome:NZ_CP018076.1/CP018076.1; plasmid unnamed1:NZ_CP018077.1/CP018077.1; plasmid unnamed2:NZ_CP018078.1/CP018078.1; plasmid unnamed3:NZ_CP018079.1/CP018079.1; plasmid unnamed4:NZ_CP018080.1/CP018080.1; plasmid unnamed5:NZ_CP018081.1/CP018081.1	-	6	4546	4400	11/28/16	4/16/17	Complete Genome	East China Sea Fisheries Research Institute	SAMN06013870	GCA_001886735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/735/GCA_001886735.1_ASM188673v1	-	AM1-D1
Xanthomonas campestris pv. vesicatoria str. 85-10	316273	PRJNA341901	341901	Proteobacteria	Gammaproteobacteria	5.41828	64.513	chromosome:NZ_CP017190.1/CP017190.1; plasmid p_XCV_1:NZ_CP017191.1/CP017191.1; plasmid p_XCV_2:NZ_CP017192.1/CP017192.1; plasmid p_XCV_3:NZ_CP017193.1/CP017193.1	-	4	4908	4465	10/26/16	4/5/17	Complete Genome	Chung Ang University	SAMN05722964	GCA_001854165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/165/GCA_001854165.1_ASM185416v1	-	85-10
Desulfosporosinus sp. OT	913865	PRJNA61253	61253	Terrabacteria group	Firmicutes	5.70234	42.1	-	AGAF01	282	5614	5130	8/26/11	5/18/17	Contig	Asbach	SAMN02471585	GCA_000224515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/515/GCA_000224515.2_ASM22451v1	21994931	OT
Xanthomonas campestris pv. vesicatoria str. 85-10	316273	PRJNA13649	13649	Proteobacteria	Gammaproteobacteria	5.42015	64.5103	chromosome:NC_007508.1/AM039952.1; plasmid pXCV183:NC_007507.1/AM039951.1; plasmid pXCV19:NC_007505.1/AM039949.1; plasmid pXCV2:NC_007504.1/AM039948.1; plasmid pXCV38:NC_007506.1/AM039950.1	-	5	4900	4503	10/20/05	6/15/17	Complete Genome	Bielefeld University	SAMEA3138194	GCA_000009165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/165/GCA_000009165.1_ASM916v1	16237009	85-10
Xanthomonas citri subsp. citri	611301	PRJNA344031	344031	Proteobacteria	Gammaproteobacteria	5.49538	64.5087	chromosome:NZ_CP018854.1/CP018854.1; plasmid pLH276.1:NZ_CP018855.1/CP018855.1; plasmid pLH276.2:NZ_CP018856.1/CP018856.1; plasmid pLH276.3:NZ_CP018857.1/CP018857.1	-	4	4997	4635	12/27/16	4/6/17	Complete Genome	cirad	SAMN05823145	GCA_001922065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/065/GCA_001922065.1_ASM192206v1	-	LH276
Megasphaera sp. MJR8396C	1603888	PRJNA272093	272093	Terrabacteria group	Firmicutes	2.4539	51	-	LRVC01	70	2257	2136	2/2/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN03854353	GCA_001546855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/855/GCA_001546855.1_ASM154685v1	-	MJR8396C
Croceicoccus marinus	450378	PRJNA322659	322659	Proteobacteria	Alphaproteobacteria	4.10919	64.5058	chromosome:NZ_CP019602.1/CP019602.1; plasmid pCME4A9I:NZ_CP019603.1/CP019603.1; plasmid pCME4A9II:NZ_CP019604.1/CP019604.1	-	3	3842	3653	1/19/17	6/15/17	Complete Genome	"Second Institute of Oceanography, State Oceanic Administration"	SAMN05176185	GCA_001661675.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/661/675/GCA_001661675.2_ASM166167v2	-	E4A9
Desmospora sp. 8437	997346	PRJNA64725	64725	Terrabacteria group	Firmicutes	3.69373	53.8	-	AFHT01	16	3670	3431	5/13/11	4/17/17	Scaffold	Baylor College of Medicine	SAMN00259688	GCA_000213595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/595/GCA_000213595.1_ASM21359v1	-	8437
Gluconacetobacter sp. SXCC-1	1004836	PRJNA65287	65287	Proteobacteria	Alphaproteobacteria	4.23334	62.4	-	AFCH01	64	3990	3649	4/22/11	5/18/17	Contig	Tianjin University of Science & Technology	SAMN02471213	GCA_000208635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/208/635/GCA_000208635.2_ASM20863v1	21551293	SXCC-1
Microvirga sp. BSC39	1549810	PRJNA257288	257288	Proteobacteria	Alphaproteobacteria	5.65574	62.9	-	JPUG01	80	5521	5223	8/11/14	4/9/17	Contig	Arizona State University	SAMN02950398	GCA_000739015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/015/GCA_000739015.1_ASM73901v1	25395650	BSC39
Xanthomonas citri subsp. citri	611301	PRJNA344031	344031	Proteobacteria	Gammaproteobacteria	5.50554	64.5038	chromosome:NZ_CP018850.1/CP018850.1; plasmid pLJ207-7.1:NZ_CP018851.1/CP018851.1; plasmid pLJ207-7.2:NZ_CP018852.1/CP018852.1; plasmid pLJ207-7.3:NZ_CP018853.1/CP018853.1	-	4	5011	4647	12/27/16	4/6/17	Complete Genome	cirad	SAMN05823144	GCA_001922085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/085/GCA_001922085.1_ASM192208v1	-	LJ207-7
Thiorhodovibrio sp. 970	631362	PRJNA62667	62667	Proteobacteria	Gammaproteobacteria	5.34286	60.2	-	AFWS02	9	4855	4583	10/6/11	5/19/17	Scaffold	JGI	SAMN02261404	GCA_000228725.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/725/GCA_000228725.3_ASM22872v3	-	970
Mycobacterium abscessus subsp. bolletii	319705	PRJNA260833	260833	Terrabacteria group	Actinobacteria	4.50173	64.5	chromosome:NZ_CP009447.1/CP009447.1	-	1	4480	4316	9/26/14	3/16/17	Complete Genome	BEI Resources/American Type	SAMN03067435	GCA_000758225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/225/GCA_000758225.1_ASM75822v1	-	MM1513
Rheinheimera sp. A13L	506534	PRJNA66371	66371	Proteobacteria	Gammaproteobacteria	4.52349	46.2	-	AFHI01	72	4039	3919	6/10/11	5/19/17	Contig	Institute of Genomics and Integrative Biology	SAMN02469972	GCA_000217935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/935/GCA_000217935.2_Rhein_1.0	21742876	A13L
Nitrosopumilus sp. AR	1027373	PRJNA66411	66411	TACK group	Thaumarchaeota	3.44157	33.7	-	AJVJ01	58	4120	3898	12/31/12	4/17/17	Contig	Chungbuk National University	SAMN02469592	GCA_000328925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/925/GCA_000328925.1_NAR	-	AR
Nitrospina sp. SCGC AAA288-L16	913337	PRJNA66865	66865	Nitrospinae/Tectomicrobia group	Nitrospinae	2.07761	39.5	-	AQTY01	136	-	-	4/19/13	7/29/15	Contig	JGI	SAMN02261272	GCA_000372225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/225/GCA_000372225.1_ASM37222v1	-	SCGC AAA288-L16
Natronomonas moolapensis 8.8.11	268739	PRJEA50649	50649	Euryarchaeota	Halobacteria	2.91257	64.5	chromosome:NC_020388.1/HF582854.1	-	1	2876	2733	2/21/13	4/17/17	Complete Genome	Max-Planck-Institute of Biochemistry	SAMEA3138954	GCA_000591055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/055/GCA_000591055.1_ASM59105v1	23516216	8.8.11
Sphingobium cloacae	120107	PRJDB4885	345589	Proteobacteria	Alphaproteobacteria	4.54757	64.4911	chromosome SCLO_1:AP017655.1; plasmid pSCLO_2:AP017656.1; plasmid pSCLO_3:AP017657.1; plasmid pSCLO_4:AP017658.1; plasmid pSCLO_5:AP017659.1; plasmid pSCLO_6:AP017660.1; plasmid pSCLO_7:AP017661.1	-	7	4048	3993	10/5/16	10/5/16	Complete Genome	Ibaraki University College of Agriculture	SAMD00053320	GCA_002355855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/855/GCA_002355855.1_ASM235585v1	-	JCM 10874
Idiomarina sp. 28-8	1260624	PRJDB703	181970	Proteobacteria	Gammaproteobacteria	2.99997	46.9	-	BANL01	76	2860	2738	11/29/12	4/12/17	Scaffold	Korea Research Institute of Bioscience and Biotechnology	SAMD00036647	GCA_000320945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/320/945/GCA_000320945.2_ASM32094v2	24092779	28-8
Xanthomonas citri subsp. malvacearum	86040	PRJNA298770	298770	Proteobacteria	Gammaproteobacteria	5.27825	64.4706	chromosome:NZ_CP013006.1/CP013006.1; plasmid pXcmN:NZ_CP013007.1/CP013007.1	-	2	4741	4233	7/24/17	7/28/17	Complete Genome	Cornell University	SAMN04166615	GCA_002224545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/545/GCA_002224545.1_ASM222454v1	-	XcmN1003
Thermodesulfobacterium sp. 37_54	1635263	PRJNA278302	278302	Thermodesulfobacteria	Thermodesulfobacteria	1.29324	36.9	-	LGES01	129	1354	1354	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445117	GCA_001508775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/775/GCA_001508775.1_ASM150877v1	26787827	-
Oceanicola sp. S124	1042378	PRJNA67845	67845	Proteobacteria	Alphaproteobacteria	4.64947	67.3	-	AFPM01	339	4501	4146	7/12/11	5/19/17	Contig	Korea Ocean Research and Development Institute	SAMN02470155	GCA_000220565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/565/GCA_000220565.2_ASM22056v2	23105065	S124
Xanthomonas citri pv. vignicola	473426	PRJNA390891	390891	Proteobacteria	Gammaproteobacteria	5.7105	64.4637	chromosome:NZ_CP022263.1/CP022263.1; plasmid plA:NZ_CP022264.1/CP022264.1; plasmid plB:NZ_CP022266.1/CP022266.1; plasmid plC:NZ_CP022265.1/CP022265.1	-	4	5199	4772	7/13/17	7/15/17	Complete Genome	IRHS	SAMN07252112	GCA_002218245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/245/GCA_002218245.1_ASM221824v1	-	CFBP7111
Acidiphilium sp. PM	1043206	PRJNA67947	67947	Proteobacteria	Alphaproteobacteria	3.92946	66.4	-	AFPR01	627	3930	3339	6/24/11	4/17/17	Scaffold	PicoMicro	SAMN02469446	GCA_000219295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/295/GCA_000219295.2_Acry_PM_v3	21914891	PM
Citricoccus sp. CH26A	1045009	PRJNA67965	67965	Terrabacteria group	Actinobacteria	3.46693	70.9	-	AFXQ01	67	3062	2874	8/24/11	4/17/17	Contig	LANGEBIO	SAMN02469456	GCA_000224415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/415/GCA_000224415.2_ASM22441v2	21994924	CH26A
Ralstonia eutropha JMP134	264198	PRJNA10646	10646	Proteobacteria	Betaproteobacteria	7.25529	64.4539	chromosome 1:NC_007347.1/CP000090.1; chromosome 2:NC_007348.1/CP000091.1; plasmid Plasmid1:NC_007337.1/CP000093.1; plasmid megaplasmid:NC_007336.1/CP000092.1	-	4	6708	6492	8/10/05	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02598255	GCA_000203875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/203/875/GCA_000203875.1_ASM20387v1	-	JMP134
Nesterenkonia sp. F	795955	PRJNA68173	68173	Terrabacteria group	Actinobacteria	2.81213	71.5	-	AFRW01	138	2544	2320	7/19/11	4/17/17	Contig	Iranian Biological Resource Center	SAMN02470081	GCA_000220985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/985/GCA_000220985.2_ASM22098v2	21914888	F
Chromobacterium sp. LK1	1628193	PRJNA277300	277300	Proteobacteria	Betaproteobacteria	4.98145	63.6	-	LDUI01	91	4639	4499	6/30/15	4/10/17	Contig	University of Malaya	SAMN03390107	GCA_001043555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/555/GCA_001043555.1_ASM104355v1	-	LK1
Aeromicrobium sp. Leaf245	1736306	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.46964	71.7	-	LMMD01	20	3341	3253	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151696	GCA_001422765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/765/GCA_001422765.1_Leaf245	26633631	Leaf245
Sphingobium sp. YBL2	484429	PRJNA275028	275028	Proteobacteria	Alphaproteobacteria	5.42742	64.4244	chromosome:NZ_CP010954.1/CP010954.1; plasmid YBL2_1:NZ_CP010955.1/CP010955.1; plasmid YBL2_2:NZ_CP010956.1/CP010956.1; plasmid YBL2_3:NZ_CP010957.1/CP010957.1; plasmid YBL2_4:NZ_CP010958.1/CP010958.1; plasmid YBL2_5:NZ_CP010959.1/CP010959.1; plasmid YBL2_6:NZ_CP010960.1/CP010960.1	-	7	5152	4956	3/4/15	4/17/17	Complete Genome	Nanjing Agriculture University	SAMN03338718	GCA_000943805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/805/GCA_000943805.1_ASM94380v1	-	YBL2
Xanthomonas euvesicatoria	456327	PRJNA344031	344031	Proteobacteria	Gammaproteobacteria	5.50018	64.4197	chromosome:NZ_CP018467.1/CP018467.1; plasmid pLMG930.1:NZ_CP018464.1/CP018464.1; plasmid pLMG930.2:NZ_CP018463.1/CP018463.1; plasmid pLMG930.3:NZ_CP018466.1/CP018466.1; plasmid pLMG930.4:NZ_CP018465.1/CP018465.1	-	5	4977	4505	12/19/16	4/11/17	Complete Genome	cirad	SAMN05823152	GCA_001908795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/795/GCA_001908795.1_ASM190879v1	-	LMG930
Anaerococcus sp. HMSC068A02	1739286	PRJNA299936	299936	Terrabacteria group	Firmicutes	1.88744	29	-	LTGQ01	71	1838	1730	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477608	GCA_001811125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/125/GCA_001811125.1_ASM181112v1	-	HMSC068A02
Oceanobacillus sp. Castelsardo	1851204	PRJNA322126	322126	Terrabacteria group	Firmicutes	3.71576	35.7	-	LYCS01	46	3663	3474	6/8/16	4/12/17	Contig	UNIVERSITY OF THE BASQUE COUNTRY	SAMN05017669	GCA_001659985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/985/GCA_001659985.1_ASM165998v1	-	Castelsardo
Gemmatimonas phototrophica	1379270	PRJNA213561	213561	FCB group	Gemmatimonadetes	4.71655	64.4	chromosome:NZ_CP011454.1/CP011454.1	-	1	3952	3877	4/6/16	4/12/17	Complete Genome	Institute of Microbiology ASCR	SAMN02296694	GCA_000695095.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/095/GCA_000695095.2_ASM69509v2	"2,482,178,726,636,750"	AP64
Sedimentibacter sp. B4	304766	PRJEB385	177097	Terrabacteria group	Firmicutes	4.10635	38.1	-	CANG01	1164	3630	3475	9/19/12	4/17/17	Contig	WUR	SAMEA2271919	GCA_000309315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/315/GCA_000309315.1_ASM30931v1	-	B4
Alicyclobacillus sp. USBA-503	1882406	PRJEB18335	355751	Terrabacteria group	Firmicutes	3.04591	44.6	-	FRAF01	74	3071	2917	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05443507	GCA_900142255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/255/GCA_900142255.1_IMG-taxon_2667527379_annotated_assembly	-	USBA-503
Plesiomonas sp. ZOR0011	1339230	PRJNA205574	205574	Proteobacteria	Gammaproteobacteria	3.83677	51.7	-	JRKB01	152	3408	3279	12/11/14	4/9/17	Contig	University of Oregon	SAMN03021525	GCA_000800945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/945/GCA_000800945.1_ZOR0011.1	-	ZOR0011
Xanthomonas sp. Mitacek01	1732019	PRJNA297445	297445	Proteobacteria	Gammaproteobacteria	3.61743	68.6	-	LKIT01	5	3254	3162	10/6/15	4/11/17	Scaffold	Oklahoma State Universtiy	SAMN04122840	GCA_001306995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/995/GCA_001306995.1_ASM130699v1	26659686	Mitacek01
Paenisporosarcina sp. HGH0030	1078085	PRJNA72489	72489	Terrabacteria group	Firmicutes	3.52231	39.3	-	AGEQ01	5	3496	3355	6/13/13	4/8/17	Scaffold	Broad Institute	SAMN02596733	GCA_000411295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/295/GCA_000411295.1_Paen_sp_HGH0030_V1	-	HGH0030
Pseudomonas putida	303	PRJNA307468	307468	Proteobacteria	Gammaproteobacteria	5.71582	64.4	chromosome:NZ_CP014343.1/CP014343.1	-	1	5191	4965	2/18/16	4/5/17	Complete Genome	Huazhong Agricultural University	SAMN04380944	GCA_001515585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/585/GCA_001515585.2_ASM151558v2	-	1A00316
Pseudomonas monteilii	76759	PRJNA281531	281531	Proteobacteria	Gammaproteobacteria	4.71436	64.4	chromosome:NZ_CP013997.1/CP013997.1	-	1	4100	3899	1/25/16	5/19/17	Complete Genome	USDA-ARS-USMARC	SAMN04158505	GCA_001534745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/745/GCA_001534745.1_ASM153474v1	-	USDA-ARS-USMARC-56711
Sporomusa sp. An4	411922	PRJEB8443	276753	Terrabacteria group	Firmicutes	5.30528	43.4	-	CTRP01	16	5086	4768	3/27/15	4/16/17	Scaffold	WAGENINGEN UNIVERSITY	SAMEA3249316	GCA_001373435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/435/GCA_001373435.1_spAn4DRAFT_v1	-	-
Pseudogulbenkiania sp. NH8B	748280	PRJDA68325	68325	Proteobacteria	Betaproteobacteria	4.333	64.4	chromosome:NC_016002.1/AP012224.1	-	1	4055	3916	9/8/11	4/17/17	Complete Genome	"Department of Applied Biological Sciences, Graduate School of Agricultural and Life Sciences, The University of Tokyo"	SAMD00060996	GCA_000283535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/535/GCA_000283535.1_ASM28353v1	22038961	NH8B
Desulfitobacterium sp. PCE1	146907	PRJNA74961	74961	Terrabacteria group	Firmicutes	4.22058	45	-	AQZF01	1	4070	3873	4/22/13	4/17/17	Scaffold	JGI	SAMN02261278	GCA_000384015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/015/GCA_000384015.1_ASM38401v1	-	PCE1
Rhodopseudomonas palustris BisA53	316055	PRJNA15751	15751	Proteobacteria	Alphaproteobacteria	5.50549	64.4	chromosome:NC_008435.1/CP000463.1	-	1	4959	4834	10/4/06	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02598338	GCA_000014825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/825/GCA_000014825.1_ASM1482v1	-	BisA53
Mogibacterium sp. CM50	936375	PRJNA78583	78583	Terrabacteria group	Firmicutes	1.88852	44.2	-	ALNL01	44	1780	1649	8/27/12	4/17/17	Contig	J. Craig Venter Institute	SAMN00828794	GCA_000293155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/155/GCA_000293155.1_MspCM50v1.0	-	CM50
Slackia sp. CM382	1111137	PRJNA78589	78589	Terrabacteria group	Actinobacteria	2.05191	62	-	ALNO01	25	1757	1692	8/27/12	4/7/17	Contig	J. Craig Venter Institute	SAMN00828797	GCA_000293015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/015/GCA_000293015.1_SspCM382v1.0	-	CM382
Xanthomonas citri pv. glycines str. 12-2	1150615	PRJNA323439	323439	Proteobacteria	Gammaproteobacteria	5.42735	64.3841	chromosome:NZ_CP015972.1/CP015972.1; plasmid pXAG2(12-2):NZ_CP015974.1/CP015974.1; plasmid pXAG27(12-2):NZ_CP015973.1/CP015973.1	-	3	4914	4542	6/2/17	6/16/17	Complete Genome	Cornell University	SAMN05179543	GCA_002163775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/775/GCA_002163775.1_ASM216377v1	-	2-Dec
uncultured Sulfurimonas sp. ML_Epsilon	1434774	PRJNA229473	229473	Proteobacteria	delta/epsilon subdivisions	2.72736	38.6	-	AZMR01	71	-	-	8/13/14	8/13/14	Contig	Penn State	SAMN02989762	GCA_000739265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/265/GCA_000739265.1_ML_Epsilon	-	-
Atopobium sp. oral taxon 199 str. F0494	1203602	PRJNA170346	170346	Terrabacteria group	Actinobacteria	1.66556	51.8	-	ATCH01	2	1530	1449	6/14/13	4/17/17	Scaffold	Broad Institute	SAMN02596982	GCA_000411555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/555/GCA_000411555.1_Atop_sp_oral_taxon_199_F0494_V1	-	F0494
Sediminibacterium sp. C3	1267211	PRJNA182943	182943	FCB group	Bacteroidetes/Chlorobi group	3.21931	39.2	-	AXUM01	4	2959	2830	12/12/13	4/9/17	Scaffold	INGEBI-CONICET	SAMN02364111	GCA_000508085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/085/GCA_000508085.1_WGS6.1	24435857	C3
Burkholderia sp. Bp7605	1740163	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	5.70569	64.3841	chromosome 1:NZ_CP013448.1/CP013448.1; chromosome 2:NZ_CP013449.1/CP013449.1	-	2	4976	4743	9/2/16	4/13/17	Complete Genome	Northern Arizona University	SAMN04196785	GCA_001718875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/875/GCA_001718875.1_ASM171887v1	-	MSMB0175
Akkermansia sp. KLE1797	1574264	PRJNA268324	268324	PVC group	Verrucomicrobia	3.10978	56.9	-	LTDG01	51	2622	2502	3/2/16	4/12/17	Scaffold	The Genome Institute at Washington University	SAMN03956217	GCA_001578645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/645/GCA_001578645.1_ASM157864v1	-	KLE1797
Candidatus Promineofilum breve	1806508	PRJEB11413	321392	Terrabacteria group	Chloroflexi	5.03397	64.3218	chromosome I:NZ_LN890655.1/LN890655.2; chromosome II:NZ_LN890656.1/LN890656.1; plasmid III:NZ_LN890657.1/LN890657.1	-	3	4319	4209	5/12/16	8/27/17	Complete Genome	"Department of Biotechnology, Chemistry and Environmental Engineering, Aalborg University"	SAMEA3627641	GCA_900066015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/015/GCA_900066015.1_Cfx-K	-	Cfx-K
Pseudomonas mosselii	78327	PRJNA401506	401506	Proteobacteria	Gammaproteobacteria	5.75109	64.3	chromosome:NZ_CP023299.1/CP023299.1	-	1	5257	5035	9/18/17	9/20/17	Complete Genome	China National Rice Research Institute	SAMN07606279	GCA_002309555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/555/GCA_002309555.1_ASM230955v1	-	BS011
Corynebacterium imitans	156978	PRJEB6403	251923	Terrabacteria group	Actinobacteria	2.56561	64.3	chromosome 1:NZ_LT906467.1/LT906467.1	-	1	2414	2300	8/15/17	8/28/17	Complete Genome	SC	SAMEA4535761	GCA_900187215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/215/GCA_900187215.1_52295_D01	-	NCTC13015
Sanguibacter sp. Leaf3	1736209	PRJNA297956	297956	Terrabacteria group	Actinobacteria	4.393	70.8	-	LMRH01	4	3886	3746	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151574	GCA_001425965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/965/GCA_001425965.1_Leaf3	26633631	Leaf3
Brevibacterium sp. HMSC22B09	1581055	PRJNA269824	269824	Terrabacteria group	Actinobacteria	2.29408	62.4	-	LWOW01	45	2057	1972	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436204	GCA_001806795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/795/GCA_001806795.1_ASM180679v1	-	HMSC22B09
Phyllobacterium sp. YR531	1144343	PRJNA83111	83111	Proteobacteria	Alphaproteobacteria	4.9973	53	-	AKIZ01	41	4859	4739	7/27/12	5/19/17	Contig	Oak Ridge National Lab	SAMN00839654	GCA_000282595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/595/GCA_000282595.1_Phyllobacterium.strYR531_v1.0	23045501	YR531
Oceanicaulis sp. HTCC2633	314254	PRJNA13448	13448	Proteobacteria	Alphaproteobacteria	3.17205	63.6	-	AAMQ01	3	3028	2947	12/22/05	4/17/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436134	GCA_000152745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/745/GCA_000152745.1_ASM15274v1	21036991	HTCC2633
Thiohalobacter thiocyanaticus	585455	PRJDB5749	392400	Proteobacteria	Gammaproteobacteria	3.23344	64.3	chromosome:AP018052.1	-	1	3074	3026	6/28/17	6/28/17	Complete Genome	"Environmental microbial, Department of civil engineering, National institute of technology, Nagaoka college"	SAMD00080052	GCA_002356355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/355/GCA_002356355.1_ASM235635v1	-	FOKN1
Eggerthella lenta	84112	PRJNA384908	384908	Terrabacteria group	Actinobacteria	3.5932	64.3	chromosome:NZ_CP021140.1/CP021140.1	-	1	3079	2976	5/17/17	5/24/17	Complete Genome	University of Illinois	SAMN06853954	GCA_002148255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/255/GCA_002148255.1_ASM214825v1	-	C592
Chromobacterium vaccinii	1108595	PRJNA342532	342532	Proteobacteria	Betaproteobacteria	5.04123	64.3	chromosome:NZ_CP017707.1/CP017707.1	-	1	4783	4532	10/27/16	4/13/17	Complete Genome	USDA-ARS	SAMN05761789	GCA_001855275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/275/GCA_001855275.1_ASM185527v1	-	21-1
Mycobacterium immunogenum	83262	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.60485	64.3	chromosome:NZ_CP016189.1/CP016189.1	-	1	5557	5409	6/28/16	4/5/17	Complete Genome	University of Michigan Medical School	SAMN05244438	GCA_001677135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/135/GCA_001677135.1_ASM167713v1	-	FLAC016
Pontibacter sp. BAB1700	1144253	PRJNA81593	81593	FCB group	Bacteroidetes/Chlorobi group	4.53722	50	-	AKIS01	267	4354	3651	7/9/12	4/7/17	Contig	Gujarat Genomics Initiative 	SAMN02469857	GCA_000277005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/005/GCA_000277005.1_ASM27700v1	23105068	BAB1700
Microcystis sp. T1-4	1160279	PRJEA88249	88249	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.69375	42.8	-	CAIP01	449	4687	4198	5/28/12	5/19/17	Contig	Genoscope CEA	SAMEA2272659	GCA_000297435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/435/GCA_000297435.1_ASM29743v1	-	T1-4
Halotalea alkalilenta	376489	PRJNA318327	318327	Proteobacteria	Gammaproteobacteria	4.38743	64.3	chromosome:NZ_CP015243.1/CP015243.1	-	1	3965	3804	5/19/16	4/12/17	Complete Genome	CSIR-Institute of Himalayan Bioresource Technology	SAMN04817514	GCA_001648175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/175/GCA_001648175.1_ASM164817v1	-	IHB B 13600
Thiovulum sp. ES	1177931	PRJNA161651	161651	Proteobacteria	delta/epsilon subdivisions	2.08059	33	-	AKKQ01	206	2148	2104	7/9/12	7/29/15	Contig	Stanford University	SAMN02471009	GCA_000276965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/965/GCA_000276965.1_Thio_ES_4_cell_v1	23023751	ES
Xanthobacter sp. 126	1131814	PRJNA162257	162257	Proteobacteria	Alphaproteobacteria	5.47226	67.8	-	JAFO01	1	5109	4947	1/14/14	4/9/17	Contig	JGI	SAMN02584915	GCA_000526175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/175/GCA_000526175.1_ASM52617v1	-	126
Mycobacterium abscessus	36809	PRJNA315990	315990	Terrabacteria group	Actinobacteria	4.8693	64.3	chromosome:NZ_CP014952.1/CP014952.1	-	1	4826	4699	4/4/16	3/19/17	Complete Genome	University of Michigan Medical School	SAMN04572935	GCA_001606235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/235/GCA_001606235.1_ASM160623v1	-	FLAC005
Enterovibrio norvegicus DSM 15893	1121869	PRJEB17269	351482	Proteobacteria	Gammaproteobacteria	5.44969	47.6	-	FOWR01	99	4917	4652	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03084138	GCA_900115495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/495/GCA_900115495.1_IMG-taxon_2599185265_annotated_assembly	-	DSM 15893
zeta proteobacterium SCGC AB-604-B04	1131289	PRJNA165211	165211	Proteobacteria	Zetaproteobacteria	0.947176	50.3	-	ARAJ01	130	-	-	4/22/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02256464	GCA_000379205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/205/GCA_000379205.1_ASM37920v1	-	SCGC AB-604-B04
zeta proteobacterium SCGC AB-137-C09	1131284	PRJNA165213	165213	Proteobacteria	Zetaproteobacteria	2.44643	47.7	-	ARAK01	223	-	-	4/22/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02256461	GCA_000379225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/225/GCA_000379225.1_ASM37922v1	-	SCGC AB-137-C09
zeta proteobacterium SCGC AB-137-J06	1131286	PRJNA165215	165215	Proteobacteria	Zetaproteobacteria	0.889605	46.7	-	ARAL01	119	-	-	4/22/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02256463	GCA_000379245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/245/GCA_000379245.1_ASM37924v1	-	SCGC AB-137-J06
zeta proteobacterium SCGC AB-602-E04	1131288	PRJNA165217	165217	Proteobacteria	Zetaproteobacteria	0.45271	46.2	-	ARAM01	99	-	-	4/22/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02256462	GCA_000379265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/265/GCA_000379265.1_ASM37926v1	-	SCGC AB-602-E04
zeta proteobacterium SCGC AB-604-O16	1131290	PRJNA165219	165219	Proteobacteria	Zetaproteobacteria	0.979689	50.5	-	AQUP01	97	-	-	4/19/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02256498	GCA_000372125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/125/GCA_000372125.1_ASM37212v1	-	SCGC AB-604-O16
zeta proteobacterium SCGC AB-133-C04	1131283	PRJNA165221	165221	Proteobacteria	Zetaproteobacteria	1.32377	43.7	-	ARAN01	189	-	-	4/22/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02256426	GCA_000379285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/285/GCA_000379285.1_ASM37928v1	-	SCGC AB-133-C04
zeta proteobacterium SCGC AB-137-I08	1131285	PRJNA165223	165223	Proteobacteria	Zetaproteobacteria	2.04898	43.3	-	ARAO01	233	-	-	4/22/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02256425	GCA_000379305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/305/GCA_000379305.1_ASM37930v1	-	SCGC AB-137-I08
zeta proteobacterium SCGC AB-133-G06	1131282	PRJNA165225	165225	Proteobacteria	Zetaproteobacteria	1.09132	46.9	-	ARAP01	142	-	-	4/22/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02256460	GCA_000379325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/325/GCA_000379325.1_ASM37932v1	-	SCGC AB-133-G06
zeta proteobacterium SCGC AB-602-C20	1131287	PRJNA165227	165227	Proteobacteria	Zetaproteobacteria	0.990274	46.2	-	ARAQ01	125	-	-	4/22/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02256459	GCA_000379345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/345/GCA_000379345.1_ASM37934v1	-	SCGC AB-602-C20
Hydrogenovibrio halophilus DSM 15072	1123516	PRJNA165231	165231	Proteobacteria	Gammaproteobacteria	2.35669	54.9	-	ARAR01	1	2220	2144	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02256398	GCA_000384235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/235/GCA_000384235.1_ASM38423v1	-	DSM 15072
Thiomicrospira sp. Milos-T2	90814	PRJNA234827	234827	Proteobacteria	Gammaproteobacteria	2.65537	38.2	-	JNLD01	2	2359	2281	6/11/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02841200	GCA_000702325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/325/GCA_000702325.1_ASM70232v1	-	Milos-T2
Kineosphaera limosa NBRC 100340	1184609	PRJDB95	164775	Terrabacteria group	Actinobacteria	4.84724	70.4	-	BAHD01	166	4383	4139	8/30/12	5/18/17	Contig	National Institute of Technology and Evaluation	SAMD00041770	GCA_000298215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/215/GCA_000298215.1_ASM29821v1	-	NBRC 100340
Mycobacterium abscessus	36809	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.14626	64.3	chromosome:NZ_CP014957.1/CP014957.1	-	1	5114	4997	4/4/16	3/19/17	Complete Genome	University of Michigan Medical School	SAMN04572940	GCA_001606335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/335/GCA_001606335.1_ASM160633v1	-	FLAC031
Jonquetella sp. BV3C21	1111126	PRJNA89629	89629	Synergistetes	Synergistia	1.65427	59.7	-	AWWC01	29	1563	1472	9/19/13	4/9/17	Contig	JCVI	SAMN00829156	GCA_000468895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/895/GCA_000468895.1_JspBV3C21v1.0	-	BV3C21
Mycobacterium immunogenum	83262	PRJNA284839	284839	Terrabacteria group	Actinobacteria	5.57378	64.3	chromosome:NZ_CP011530.1/CP011530.1	-	1	5535	5376	3/31/16	4/5/17	Complete Genome	University of Balearic Islands	SAMN03733495	GCA_001605725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/725/GCA_001605725.1_ASM160572v1	27231356	CCUG 47286
Arthrobacter sp. LS16	1690248	PRJNA290716	290716	Terrabacteria group	Actinobacteria	3.85124	64.3	chromosome:NZ_CP012171.1/CP012171.1	-	1	3574	3421	9/11/15	4/11/17	Complete Genome	Agriculture and Agri-Food Canada	SAMN03897213	GCA_001281115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/115/GCA_001281115.1_ASM128111v1	26769946	LS16
Austwickia chelonae NBRC 105200	1184607	PRJDB94	164773	Terrabacteria group	Actinobacteria	3.54112	66.2	-	BAGZ01	33	3078	2996	8/30/12	4/8/17	Contig	National Institute of Technology and Evaluation	SAMD00041799	GCA_000298175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/175/GCA_000298175.1_ASM29817v1	-	NBRC 105200
Verrucomicrobium sp. 3C	1134055	PRJNA165235	165235	PVC group	Verrucomicrobia	2.77207	60.8	-	ARAS01	8	2815	2480	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02256457	GCA_000379365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/365/GCA_000379365.1_ASM37936v1	-	3C
Lachnoanaerobaculum sp. MSX33	936596	PRJNA165899	165899	Terrabacteria group	Firmicutes	2.87105	36.2	-	AZXX01	99	2683	2529	1/3/14	4/17/17	Contig	JCVI	SAMN02597440	GCA_000512995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/995/GCA_000512995.1_LspMSX33v1.0	-	MSX33
Shuttleworthia sp. MSX8B	936574	PRJNA165923	165923	Terrabacteria group	Firmicutes	2.10262	51.8	-	JAQT01	38	1916	1807	1/28/14	4/17/17	Contig	JCVI	SAMN02641571	GCA_000524295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/295/GCA_000524295.1_SspMSX8Bv1.0	-	MSX8B
Pandoraea pulmonicola	93221	PRJNA270151	270151	Proteobacteria	Betaproteobacteria	5.86762	64.3	chromosome:NZ_CP010310.2/CP010310.2	-	1	5069	4908	1/6/15	4/17/17	Complete Genome	University of Malaya	SAMN03263587	GCA_000815105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/105/GCA_000815105.2_ASM81510v2	-	DSM 16583
Corynebacterium lubricantis DSM 45231	1121363	PRJNA165249	165249	Terrabacteria group	Actinobacteria	2.94417	58.6	-	ARAV01	58	2805	2666	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02256424	GCA_000379425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/425/GCA_000379425.1_ASM37942v1	-	DSM 45231
Olivibacter sitiensis DSM 17696	1122621	PRJNA165253	165253	FCB group	Bacteroidetes/Chlorobi group	5.05357	44.6	-	ATZA01	110	4414	4211	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440601	GCA_000427965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/965/GCA_000427965.1_ASM42796v1	-	DSM 17696
Sciscionella marina DSM 45152	1123244	PRJNA165255	165255	Terrabacteria group	Actinobacteria	8.53645	67.8	-	ARAX01	86	8090	7714	4/22/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02256422	GCA_000379465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/465/GCA_000379465.1_ASM37946v1	-	DSM 45152
Wenxinia marina DSM 24838	1123501	PRJNA165257	165257	Proteobacteria	Alphaproteobacteria	4.17589	70.5	-	ARAY01	41	4039	3888	4/22/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02256455	GCA_000379485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/485/GCA_000379485.1_ASM37948v1	-	DSM 24838
alpha proteobacterium SCGC AAA024-N17	938623	PRJNA165275	165275	Proteobacteria	Alphaproteobacteria	0.328144	30.1	-	AQZA01	45	-	-	4/19/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02256488	GCA_000372045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/045/GCA_000372045.1_ASM37204v1	-	SCGC AAA024-N17
Halosimplex carlsbadense 2-9-1	797114	PRJNA174924	174924	Euryarchaeota	Halobacteria	4.69489	67.7	-	AOIU01	50	4454	4274	2/4/13	5/18/17	Contig	"University of California, Davis"	SAMN02471654	GCA_000337455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/455/GCA_000337455.1_ASM33745v1	25393412	2/9/01
Lamprocystis purpurea DSM 4197	765909	PRJNA165285	165285	Proteobacteria	Gammaproteobacteria	6.90874	64.3	-	ARBC01	213	6157	5713	4/22/13	5/18/17	Scaffold	DOE Joint Genome Institute	SAMN02256451	GCA_000379525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/525/GCA_000379525.1_ASM37952v1	-	DSM 4197
Desulfosarcina sp. BuS5	933262	PRJNA165293	165293	Proteobacteria	delta/epsilon subdivisions	3.60057	41.3	-	AXAM01	217	3558	3305	9/30/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441126	GCA_000472805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/805/GCA_000472805.1_ASM47280v1	-	BuS5
actinobacterium SCGC AAA024-D14	932039	PRJNA165267	165267	Terrabacteria group	Actinobacteria	0.778696	45.4	-	AQYZ01	82	-	-	4/19/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02256500	GCA_000372025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/025/GCA_000372025.1_ASM37202v1	-	SCGC AAA024-D14
Mycoplasma auris 15026	1188233	PRJNA164747	164747	Terrabacteria group	Tenericutes	0.767867	27.2	-	AORI01	18	672	617	4/19/13	4/17/17	Contig	EVOLMYCO	SAMN02471342	GCA_000367765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/765/GCA_000367765.1_version_1.0	23766401	15026
Mycoplasma alkalescens 14918	1188234	PRJNA164749	164749	Terrabacteria group	Tenericutes	0.77194	25.6	-	AMWK01	20	662	606	4/18/13	4/17/17	Contig	EVOLMYCO	SAMN02471609	GCA_000367445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/445/GCA_000367445.1_ACN	23766408	14918
Mycoplasma bovigenitalium 51080	1188235	PRJNA164751	164751	Terrabacteria group	Tenericutes	0.862704	29	-	AORH01	43	751	692	4/19/13	4/17/17	Contig	EVOLMYCO	SAMN02471345	GCA_000367805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/805/GCA_000367805.1_version_1.0	23766408	51080
Verrucomicrobia bacterium SCGC AB-629-E09	1131271	PRJNA165237	165237	PVC group	Verrucomicrobia	0.764777	42.6	-	AQUQ01	189	-	-	4/19/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02256496	GCA_000371985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/985/GCA_000371985.1_ASM37198v1	-	SCGC AB-629-E09
Haemophilus parahaemolyticus HK385	1095744	PRJNA75139	75139	Proteobacteria	Gammaproteobacteria	2.03058	40.1	-	AJSW01	61	1983	1882	5/10/12	4/7/17	Contig	J. Craig Venter Institute	SAMN00761805	GCA_000262265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/265/GCA_000262265.1_ASM26226v1	-	HK385
Mycobacterium abscessus subsp. abscessus	1185650	PRJNA263506	263506	Terrabacteria group	Actinobacteria	4.68633	64.3	chromosome:NZ_CP009615.1/CP009615.1	-	1	4674	4553	10/31/14	3/16/17	Complete Genome	BEI Resources/American Type	SAMN03103584	GCA_000770175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/175/GCA_000770175.1_ASM77017v1	-	DJO-44274
Bacillus marmarensis DSM 21297	1188261	PRJNA165051	165051	Terrabacteria group	Firmicutes	4.02059	39.8	-	ATAE01	92	4049	3946	10/17/13	4/16/17	Contig	"University of California, Los Angeles"	SAMN02471688	GCA_000474275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/275/GCA_000474275.2_Bmar1.0	24285666	DSM 21297
Gluconobacter frateurii NBRC 101659	1104996	PRJDB2	165861	Proteobacteria	Alphaproteobacteria	3.15747	55.7	-	BADZ02	44	2986	2868	4/12/12	4/10/17	Contig	Yamaguchi University	SAMD00035426	GCA_000284875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/875/GCA_000284875.2_ASM28487v2	22434571	NBRC 101659
Capnocytophaga cynodegmi DSM 19736	926551	PRJNA163027	163027	FCB group	Bacteroidetes/Chlorobi group	2.6571	34.4	-	ARAI01	37	2364	2264	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02256428	GCA_000379185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/185/GCA_000379185.1_ASM37918v1	-	E6447
Enterovibrio calviensis DSM 14347	1121867	PRJNA221036	221036	Proteobacteria	Gammaproteobacteria	5.50335	47.5	-	JHZA01	28	4914	4740	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743982	GCA_000621165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/165/GCA_000621165.1_ASM62116v1	-	DSM 14347
Ureaplasma diversum NCTC 246	1188241	PRJNA164765	164765	Terrabacteria group	Tenericutes	1.0112	28.1	-	JFDP01	116	821	713	7/21/14	4/9/17	Contig	EVOLMYCO	SAMN02927605	GCA_000731915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/915/GCA_000731915.1_ASM73191v1	-	NCTC 246
Vibrio rumoiensis 1S-45	1188252	PRJNA164805	164805	Proteobacteria	Gammaproteobacteria	3.4475	41.1	-	AJYK02	117	3065	2994	8/13/12	4/17/17	Scaffold	MIT	SAMN02470453	GCA_000286955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/955/GCA_000286955.2_ASM28695v2	22955834	1S-45
Mycobacterium abscessus subsp. abscessus	1185650	PRJNA263504	263504	Terrabacteria group	Actinobacteria	4.68749	64.3	chromosome:NZ_CP009616.1/CP009616.1	-	1	4675	4555	10/31/14	3/16/17	Complete Genome	BEI Resources/American Type	SAMN03103574	GCA_000770215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/215/GCA_000770215.1_ASM77021v1	-	4529
Corynebacterium imitans	156978	PRJNA246650	246650	Terrabacteria group	Actinobacteria	2.56532	64.3	chromosome:NZ_CP009211.1/CP009211.1	-	1	2405	2295	8/14/14	4/17/17	Complete Genome	Bielefeld University	SAMN02950575	GCA_000739455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/455/GCA_000739455.1_ASM73945v1	25414508	DSM 44264
Vibrio genomosp. F6 str. FF-238	1191298	PRJNA167003	167003	Proteobacteria	Gammaproteobacteria	4.23962	42.3	-	AJYW02	313	3798	3678	6/25/12	4/17/17	Scaffold	Broad Institute	SAMN02470455	GCA_000272145.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/145/GCA_000272145.2_ASM27214v2	22955834	FF-238
Vibrio kanaloae 5S-149	1191299	PRJNA167004	167004	Proteobacteria	Gammaproteobacteria	4.70109	43.8	-	AJYX02	50	4208	4036	6/25/12	4/17/17	Scaffold	Broad Institute	SAMN02470441	GCA_000272165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/165/GCA_000272165.2_ASM27216v2	22955834	5S-149
Vibrio crassostreae	246167	PRJEB5876	278607	Proteobacteria	Gammaproteobacteria	5.77057	44.3	-	CCJY01	173	5219	4971	3/20/15	4/4/17	Scaffold	STATION BIOLOGIQUE DE ROSCOFF	SAMEA2591285	GCA_001368855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/855/GCA_001368855.1_VRSK9v1_PRJEB5876	-	J2-9
Vibrio genomosp. F10 str. ZF-129	1187848	PRJNA164829	164829	Proteobacteria	Gammaproteobacteria	4.41818	43.3	-	AJYQ02	137	4013	3925	8/13/12	4/18/17	Scaffold	MIT	SAMN02470475	GCA_000287055.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/055/GCA_000287055.2_ASM28705v2	22955834	ZF-129
Nitratireductor aquibiodomus NL21 = JCM 21793	1231185	PRJDB654	243238	Proteobacteria	Alphaproteobacteria	4.51645	61.3	-	BAMP01	207	4459	3485	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00013635	GCA_000615975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/975/GCA_000615975.1_ASM61597v1	-	JCM 21793
Indibacter alkaliphilus LW1	1189612	PRJNA165173	165173	FCB group	Bacteroidetes/Chlorobi group	5.03605	39.7	-	ALWO02	56	4306	4199	9/10/12	4/17/17	Contig	Institute of Genomics and Integrative Biology	SAMN02469969	GCA_000295935.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/935/GCA_000295935.2_IndiAl02	23868132	LW1
Staphylococcus massiliensis CCUG 55927	1189613	PRJNA165175	165175	Terrabacteria group	Firmicutes	2.36659	36.7	-	AKGE01	8	2255	2128	9/17/12	4/7/17	Scaffold	URMITE	SAMN02472049	GCA_000298075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/075/GCA_000298075.1_ASM29807v1	23209235	CCUG 55927
Halovivax ruber XH-70	797302	PRJNA59897	59897	Euryarchaeota	Halobacteria	3.22388	64.3	chromosome:CP003050.1	-	1	3187	3099	12/27/12	7/17/13	Complete Genome	DOE Joint Genome Institute	SAMN02232030	GCA_000328525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/525/GCA_000328525.1_ASM32852v1	-	XH-70
Mycobacterium abscessus subsp. massiliense str. GO 06	1198627	PRJNA168263	168263	Terrabacteria group	Actinobacteria	4.68787	64.3	chromosome:NC_018150.2/CP003699.2	-	1	4674	4558	7/16/12	3/8/17	Complete Genome	University of Brasilia	SAMN02604144	GCA_000277775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/775/GCA_000277775.2_ASM27777v2	22965084	GO 06
Psychroflexus gondwanensis ACAM 44	1189619	PRJNA165633	165633	FCB group	Bacteroidetes/Chlorobi group	3.31177	35.8	-	APLF01	62	3021	2887	4/8/13	4/8/17	Contig	University of Tasmania	SAMN02471957	GCA_000355905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/905/GCA_000355905.1_Pgondw1.0	24391155	ACAM 44
Nitritalea halalkaliphila LW7	1189621	PRJNA165693	165693	FCB group	Bacteroidetes/Chlorobi group	3.6337	48.6	-	AJYA01	140	3496	2702	6/4/12	4/17/17	Contig	Institute of Genomics and Integrative Biology	SAMN02469971	GCA_000265075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/075/GCA_000265075.1_ASM26507v1	23012274	LW7
Aliivibrio logei ATCC 35077	1269941	PRJNA183872	183872	Proteobacteria	Gammaproteobacteria	5.28811	38.9	-	ASAH01	52	4822	4599	5/10/13	4/21/17	Contig	Smithsonian Institution	SAMN02470997	GCA_000390125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/125/GCA_000390125.1_Whole_genome_shotgun_assembly	-	ATCC 35077
Acinetobacter venetianus VE-C3	1197884	PRJNA168177	168177	Proteobacteria	Gammaproteobacteria	3.54451	39.1263	chromosome:NZ_CM001772.1/CM001772.1; plasmid pAV3:NZ_ALIG01000010.1/ALIG01000010.1	ALIG01	2	3427	3120	8/23/12	3/31/17	Chromosome	University of Florence	SAMN02471758	GCA_000308235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/235/GCA_000308235.2_ASM30823v2	23528645	VE-C3
Bradyrhizobium sp. S23321	335659	PRJDA72425	72425	Proteobacteria	Alphaproteobacteria	7.23184	64.3	chromosome:NC_017082.1/AP012279.1	-	1	6849	6733	3/29/12	4/17/17	Complete Genome	National Institute of Genetics	SAMD00060998	GCA_000284275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/275/GCA_000284275.1_ASM28427v1	22452844	S23321
Chondromyces apiculatus DSM 436	1192034	PRJNA192263	192263	Proteobacteria	delta/epsilon subdivisions	11.5777	70.3	-	ASRX01	182	8741	8292	3/27/14	4/9/17	Contig	IMTECH-CSIR	SAMN02952950	GCA_000601485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/485/GCA_000601485.1_Chondromyces_apiculatus_DSM_436_genome_assembly	-	DSM 436
Gemmatimonas aurantiaca T-27	379066	PRJDA18501	18501	FCB group	Gemmatimonadetes	4.63696	64.3	chromosome:NC_012489.1/AP009153.1	-	1	3997	3915	4/1/09	4/17/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00060909	GCA_000010305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/305/GCA_000010305.1_ASM1030v1	-	T-27
Halomonas desiderata SP1	1191209	PRJNA369263	369263	Proteobacteria	Gammaproteobacteria	4.72264	64.7	-	MUMZ01	194	4377	4200	5/19/17	5/24/17	Contig	Penn State University	SAMN06282657	GCA_002151265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/265/GCA_002151265.1_ASM215126v1	-	SP1
Rhodothermus marinus DSM 4252	518766	PRJNA29281	29281	FCB group	Bacteroidetes/Chlorobi group	3.38674	64.2672	chromosome:NC_013501.1/CP001807.1; plasmid pRMAR01:NC_013502.1/CP001808.1	-	2	2941	2865	11/3/09	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002700	GCA_000024845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/845/GCA_000024845.1_ASM2484v1	21304669	DSM 4252
Sphingobium xenophagum NBRC 107872	1219037	PRJDB316	172284	Proteobacteria	Alphaproteobacteria	4.48642	62.9	-	BARE01	138	4305	4107	4/10/13	5/19/17	Contig	National Institute of Technology and Evaluation	SAMD00041805	GCA_000367345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/345/GCA_000367345.1_ASM36734v1	-	NBRC 107872
Leptospira meyeri serovar Hardjo str. Went 5	1193051	PRJNA167225	167225	Spirochaetes	Spirochaetia	4.18806	38	-	AKXE01	7	3963	3891	10/9/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436259	GCA_000304275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/275/GCA_000304275.1_gls454017v1.0	-	Went 5
Leptospira fainei serovar Hurstbridge str. BUT 6	1193011	PRJNA167230	167230	Spirochaetes	Spirochaetia	4.28732	43.5	-	AKWZ02	13	3967	3873	10/17/12	4/17/17	Contig	J. Craig Venter Institute	SAMN02436574	GCA_000306235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/235/GCA_000306235.2_gls454058v2.0	-	BUT 6
Leptospira wolffii serovar Khorat str. Khorat-H2	1193069	PRJNA167232	167232	Spirochaetes	Spirochaetia	4.40083	45.6	-	AKWX02	23	4185	4061	10/17/12	4/17/17	Contig	J. Craig Venter Institute	SAMN02436578	GCA_000306115.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/115/GCA_000306115.2_gls454061v02	-	Khorat-H2
Leptospira sp. Fiocruz LV3954	1193012	PRJNA167234	167234	Spirochaetes	Spirochaetia	4.03839	41.7	-	AKWV02	91	4066	3705	10/17/12	4/17/17	Contig	J. Craig Venter Institute	SAMN02436391	GCA_000306435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/435/GCA_000306435.2_gls454068v2.0	-	Fiocruz LV3954
Microbacterium yannicii PS01	1194165	PRJNA159261	159261	Terrabacteria group	Actinobacteria	3.9525	69.5	-	CAJF01	67	3684	3508	6/12/12	4/17/17	Contig	URMITE	SAMEA3138423	GCA_000304335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/335/GCA_000304335.1_My_PS01	22887680	PS01
Thermomicrobium roseum DSM 5159	309801	PRJNA32569	32569	Terrabacteria group	Chloroflexi	2.92074	64.2598	chromosome:NC_011959.1/CP001275.1; plasmid unnamed:NC_011961.1/CP001276.1	-	2	2717	2644	1/22/09	4/7/17	Complete Genome	J Craig Venter Institute	SAMN02603430	GCA_000021685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/685/GCA_000021685.1_ASM2168v1	19148287	DSM 5159
Alkalibacillus haloalkaliphilus C5	1193119	PRJNA167217	167217	Terrabacteria group	Firmicutes	2.90806	37.1	-	AKIF01	325	3177	2809	6/18/12	4/17/17	Contig	Anand Agricultural University	SAMN02470881	GCA_000269905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/905/GCA_000269905.1_ASM26990v1	22887673	C5
Rhodothermus marinus SG0.5JP17-172	762570	PRJNA56095	56095	FCB group	Bacteroidetes/Chlorobi group	3.33412	64.2484	chromosome:NC_015966.1/CP003029.1; plasmid pRHOM17201:NC_015970.1/CP003030.1; plasmid pRHOM17202:NC_015967.1/CP003031.1	-	3	2960	2861	8/31/11	4/7/17	Complete Genome	JGI	SAMN02261379	GCA_000224745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/745/GCA_000224745.1_ASM22474v1	-	SG0.5JP17-172
Haloterrigena turkmenica DSM 5511	543526	PRJNA30411	30411	Euryarchaeota	Halobacteria	5.44078	64.2484	chromosome:NC_013743.1/CP001860.1; plasmid pHTUR01:NC_013744.1/CP001861.1; plasmid pHTUR02:NC_013745.1/CP001862.1; plasmid pHTUR03:NC_013746.1/CP001863.1; plasmid pHTUR04:NC_013747.1/CP001864.1; plasmid pHTUR05:NC_013748.1/CP001865.1; plasmid pHTUR06:NC_013749.1/CP001866.1	-	7	5227	4989	1/19/10	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598471	GCA_000025325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/325/GCA_000025325.1_ASM2532v1	21304683	DSM 5511
[Clostridium] termitidis CT1112	1195236	PRJNA167606	167606	Terrabacteria group	Firmicutes	6.41586	41.2	-	AORV01	78	5378	5173	4/3/13	5/19/17	Contig	University of Manitoba	SAMN02471873	GCA_000350485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/485/GCA_000350485.1_C.termitidis_454_shotgun_Newbler	23704187	CT1112
Rhodococcus wratislaviensis IFP 2016	1195242	PRJNA167644	167644	Terrabacteria group	Actinobacteria	9.68764	67	-	ANIU01	927	9692	8247	12/19/12	5/19/17	Contig	BRI-CNRC	SAMN00998637	GCA_000325625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/625/GCA_000325625.1_ASM32562v1	-	IFP 2016
Alishewanella agri BL06	1195246	PRJNA167671	167671	Proteobacteria	Gammaproteobacteria	3.49171	50.6	-	AKKU01	30	3250	3144	6/25/12	4/17/17	Contig	"Department of Environmental Science and Ecological Engineering, Korea University"	SAMN02470206	GCA_000272005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/005/GCA_000272005.1_ASM27200v1	22933763	BL06
Allochromatium vinosum DSM 180	572477	PRJNA32547	32547	Proteobacteria	Gammaproteobacteria	3.66907	64.2117	chromosome:NC_013851.1/CP001896.1; plasmid pALVIN01:NC_013852.1/CP001897.1; plasmid pALVIN02:NC_013862.1/CP001898.1	-	3	3327	3221	2/16/10	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598487	GCA_000025485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/485/GCA_000025485.1_ASM2548v1	22675582	DSM 180
Cutibacterium granulosum	33011	PRJEB6403	251923	Terrabacteria group	Actinobacteria	2.17524	64.2	chromosome 1:NZ_LT906441.1/LT906441.1	-	1	1857	1749	8/15/17	8/28/17	Complete Genome	SC	SAMEA4412665	GCA_900186975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/975/GCA_900186975.1_50569_F01	-	NCTC11865
Corynebacterium urealyticum	43771	PRJEB6403	251923	Terrabacteria group	Actinobacteria	2.37753	64.2	chromosome 1:NZ_LT906481.1/LT906481.1	-	1	2065	1960	8/15/17	8/28/17	Complete Genome	SC	SAMEA4530651	GCA_900187235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/235/GCA_900187235.1_52184_D01	-	NCTC12011
Streptococcus massiliensis DSM 18628	1123307	PRJNA165443	165443	Terrabacteria group	Firmicutes	1.86415	41.5	-	ARCE01	84	1960	1800	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02256435	GCA_000380065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/065/GCA_000380065.1_ASM38006v1	-	DSM 18628
Acidovorax sp. NA3	553814	PRJNA285679	285679	Proteobacteria	Betaproteobacteria	4.12263	64.2	chromosome 1:NZ_CP021361.1/CP021361.1	-	1	3858	3435	5/24/17	8/4/17	Complete Genome	University of North Carolina - Chapel Hill	SAMN03755632	GCA_002157145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/145/GCA_002157145.1_ASM215714v1	-	NA3
Mycobacterium abscessus subsp. massiliense	1962118	PRJNA315990	315990	Terrabacteria group	Actinobacteria	4.93647	64.2	chromosome:NZ_CP021122.1/CP021122.1	-	1	4905	4777	5/15/17	5/24/17	Complete Genome	University of Michigan Medical School	SAMN06859124	GCA_002140035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/035/GCA_002140035.1_ASM214003v1	-	FLAC047
Desulfovibrio piger	901	PRJEB16679	353809	Proteobacteria	delta/epsilon subdivisions	2.80753	64.2	chromosome I:NZ_LT630450.1/LT630450.1	-	1	2487	2353	11/12/16	4/16/17	Complete Genome	IFR	SAMEA4527702	GCA_900116045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/045/GCA_900116045.1_DESPIGER	-	-
Aeribacillus pallidus	33936	PRJNA313406	313406	Terrabacteria group	Firmicutes	3.81861	38.9	-	LWBR01	79	3782	3550	4/22/16	4/12/17	Scaffold	Research Center of Biotechnology RAS	SAMN04521049	GCA_001629795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/629/795/GCA_001629795.1_ASM162979v1	27284131	8m3
Paraburkholderia terrae BS001	1171375	PRJNA157903	157903	Proteobacteria	Betaproteobacteria	11.2941	61.8	-	AKAU01	330	10418	9859	6/5/12	5/18/17	Contig	"RuG, NL"	SAMN02470871	GCA_000265115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/115/GCA_000265115.1_ASM26511v1	22843604	BS001
Fictibacillus macauensis ZFHKF-1	1196324	PRJNA167832	167832	Terrabacteria group	Firmicutes	3.73636	40.6	-	AKKV01	55	3963	3798	6/18/12	4/17/17	Contig	The University of Hong Kong	SAMN02471793	GCA_000269865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/865/GCA_000269865.1_ASM26986v1	22887677	ZFHKF-1
Alishewanella aestuarii B11	1197174	PRJNA168058	168058	Proteobacteria	Gammaproteobacteria	3.58805	51	-	ALAB01	43	3385	3243	7/19/12	4/17/17	Contig	Korea University	SAMN02470205	GCA_000280055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/055/GCA_000280055.1_ASM28005v1	22965096	B11
Microbacterium barkeri 2011-R4	1197720	PRJNA168054	168054	Terrabacteria group	Actinobacteria	3.62787	69.2	-	AKVP01	133	3559	3234	9/26/12	4/16/17	Contig	Zhejiang University	SAMN02472166	GCA_000299315.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/315/GCA_000299315.2_ASM29931v2	23144410	2011-R4
Mycobacterium abscessus	36809	PRJNA315990	315990	Terrabacteria group	Actinobacteria	4.89199	64.2	chromosome:NZ_CP016188.1/CP016188.1	-	1	4864	4737	6/28/16	3/20/17	Complete Genome	University of Michigan Medical School	SAMN05244437	GCA_001677095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/095/GCA_001677095.1_ASM167709v1	-	FLAC006
Mycobacterium abscessus	36809	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.1881	64.2	chromosome:NZ_CP016190.1/CP016190.1	-	1	5203	5117	6/28/16	3/20/17	Complete Genome	University of Michigan Medical School	SAMN05244439	GCA_001677155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/155/GCA_001677155.1_ASM167715v1	-	FLAC028
Pseudomonas marginalis ICMP 11289	1198318	PRJNA296727	296727	Proteobacteria	Gammaproteobacteria	6.09382	59.2	-	LKGX01	134	5528	5336	12/15/15	4/11/17	Contig	New Zealand Institute for Plant & Food research	SAMN04102815	GCA_001467325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/325/GCA_001467325.1_ASM146732v1	27056212	ICMP 11289
Marine Group I thaumarchaeote SCGC AB-629-A13	1131267	PRJNA165499	165499	TACK group	Thaumarchaeota	0.404769	35.7	-	ARWP01	70	-	-	5/16/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441629	GCA_000399745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/745/GCA_000399745.1_ASM39974v1	-	AB-629-A13
Marine Group I thaumarchaeote SCGC AB-629-I23	1131266	PRJNA165501	165501	TACK group	Thaumarchaeota	1.3093	35.7	-	ARWQ01	132	-	-	5/16/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441296	GCA_000399765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/765/GCA_000399765.1_ASM39976v1	-	SCGC AB-629-I23
Marine Group II euryarchaeote SCGC AB-629-J06	1131268	PRJNA165503	165503	Euryarchaeota	unclassified Euryarchaeota	0.534847	34.1	-	AQVM01	113	-	-	4/20/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02256479	GCA_000376045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/045/GCA_000376045.1_ASM37604v1	-	SCGC AB-629-J06
Marinobacter lipolyticus SM19	1318628	PRJNA196694	196694	Proteobacteria	Gammaproteobacteria	4.02001	56.8	-	ASAD01	25	3668	3572	5/15/13	4/11/17	Scaffold	University of Sevilla	SAMN02471937	GCA_000397065.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/065/GCA_000397065.2_MarLipol1.0	23814106	SM19
Thermoanaerobacter thermohydrosulfuricus WC1	1198630	PRJNA168425	168425	Terrabacteria group	Firmicutes	2.57548	34.4	-	AMYG01	61	2610	2437	4/4/13	4/11/17	Scaffold	University of Manitoba	SAMN02471871	GCA_000353265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/265/GCA_000353265.2_TthWC1_draft_genome1	23555660	WC1
Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223	1121098	PRJNA169707	169707	FCB group	Bacteroidetes/Chlorobi group	4.51069	42.7	-	ARDF01	94	3992	3799	4/19/13	5/18/17	Scaffold	DOE Joint Genome Institute	SAMN02441379	GCA_000373085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/085/GCA_000373085.1_ASM37308v1	-	DSM 17679
Acinetobacter baylyi DSM 14961 = CIP 107474	1120924	PRJNA183290	183290	Proteobacteria	Gammaproteobacteria	3.61165	40.5	-	APPT01	10	3347	3222	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01087846	GCA_000368685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/685/GCA_000368685.1_Acin_bayl_CIP_107474_V1	-	CIP 107474
Mycobacterium abscessus	36809	PRJNA315990	315990	Terrabacteria group	Actinobacteria	4.86726	64.2	chromosome:NZ_CP016191.1/CP016191.1	-	1	4881	4724	6/28/16	3/20/17	Complete Genome	University of Michigan Medical School	SAMN05244440	GCA_001677175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/175/GCA_001677175.1_ASM167717v1	-	FLAC030
Alicycliphilus sp. B1	1603291	PRJDB3450	279571	Proteobacteria	Betaproteobacteria	7.46596	67.3	-	BBSJ01	59	7083	5927	3/24/15	4/10/17	Contig	"Department of Material and Environmental Chemistry, Graduate School of Engineering, Utsunomiya University"	SAMD00024789	GCA_000974645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/645/GCA_000974645.1_ASM97464v1	25977425	B1
Alicyclobacillus hesperidum	89784	PRJEB16596	349864	Terrabacteria group	Firmicutes	2.8597	53.9	-	FNOJ01	53	2840	2689	10/22/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04489725	GCA_900107035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/035/GCA_900107035.1_IMG-taxon_2634166329_annotated_assembly	-	DSM 12489
Moritella dasanensis ArB 0140	1201293	PRJNA169017	169017	Proteobacteria	Gammaproteobacteria	4.88958	40.8	-	AKXQ01	61	4309	4154	7/9/12	5/19/17	Contig	Korea Polar Research Institute	SAMN02470165	GCA_000276805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/805/GCA_000276805.1_ASM27680v1	22965082	ArB 0140
Mycobacterium abscessus	36809	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.21417	64.2	chromosome:NZ_CP016192.1/CP016192.1	-	1	5232	5074	6/28/16	3/20/17	Complete Genome	University of Michigan Medical School	SAMN05244441	GCA_001677195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/195/GCA_001677195.1_ASM167719v1	-	FLAC046
Bacteriovorax sp. BAL6_X	1201290	PRJNA210328	210328	Proteobacteria	Oligoflexia	3.23368	36.5	-	AUMC01	10	3119	3060	8/5/13	4/17/17	Contig	J. Craig Venter Institute	SAMN02436194	GCA_000443995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/995/GCA_000443995.1_Hybrid_CA1_filtered	-	BAL6_X
Pseudochrobactrum sp. AO18b	1201036	PRJNA169003	169003	Proteobacteria	Alphaproteobacteria	3.75146	51.4	-	ANNO01	506	3509	3298	6/10/13	4/17/17	Contig	University of Georgia	SAMN02471778	GCA_000409565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/565/GCA_000409565.1_AO18b	-	AO18b
Rhizobium giardinii bv. giardinii H152	1041139	PRJNA165331	165331	Proteobacteria	Alphaproteobacteria	6.81013	60.7	-	ARBG01	190	6582	6098	4/22/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02256420	GCA_000379605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/605/GCA_000379605.1_ASM37960v1	-	H152
Rhizobium sullae WSM1592	1041146	PRJNA165333	165333	Proteobacteria	Alphaproteobacteria	7.53082	59.9	-	ATZB01	118	7504	6968	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441564	GCA_000427985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/985/GCA_000427985.1_ASM42798v1	-	WSM1592
Rhizobium mongolense USDA 1844	1079460	PRJNA165335	165335	Proteobacteria	Alphaproteobacteria	7.16635	59.5	-	ATTQ01	96	7131	6470	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440561	GCA_000419765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/765/GCA_000419765.1_ASM41976v1	-	USDA 1844
Actinomycetospora chiangmaiensis DSM 45062	1120948	PRJNA165357	165357	Terrabacteria group	Actinobacteria	5.86108	74	-	ARBI01	32	5695	5503	4/22/13	5/18/17	Scaffold	DOE Joint Genome Institute	SAMN02256421	GCA_000379625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/625/GCA_000379625.1_ASM37962v1	-	DSM 45062
Actinoplanes globisporus DSM 43857	1120949	PRJNA165359	165359	Terrabacteria group	Actinobacteria	10.9885	70.9	-	ARBJ01	65	10018	9723	4/22/13	5/18/17	Scaffold	DOE Joint Genome Institute	SAMN02256449	GCA_000379645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/645/GCA_000379645.1_ASM37964v1	-	DSM 43857
Amycolatopsis taiwanensis DSM 45107	1120984	PRJNA165363	165363	Terrabacteria group	Actinobacteria	8.77751	68.5	-	JAFB01	73	8309	7917	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02584918	GCA_000519205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/205/GCA_000519205.1_ASM51920v1	-	DSM 45107
Paraburkholderia nodosa DSM 21604	1121127	PRJNA165365	165365	Proteobacteria	Betaproteobacteria	9.62797	64.1	-	JAFA01	113	8778	8339	1/10/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02584919	GCA_000519185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/185/GCA_000519185.1_ASM51918v1	-	DSM 21604
Catelliglobosispora koreensis DSM 44566	1121272	PRJNA165369	165369	Terrabacteria group	Actinobacteria	7.68859	64.4	-	ARBL01	45	7451	7233	4/22/13	5/18/17	Scaffold	DOE Joint Genome Institute	SAMN02256447	GCA_000379685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/685/GCA_000379685.1_ASM37968v1	-	DSM 44566
Corynebacterium capitovis DSM 44611	1121354	PRJNA165371	165371	Terrabacteria group	Actinobacteria	1.96087	64.5	-	AQUV01	5	1894	1816	4/19/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02256495	GCA_000372085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/085/GCA_000372085.1_ASM37208v1	-	DSM 44611
Corynebacterium caspium DSM 44850	1121355	PRJNA165373	165373	Terrabacteria group	Actinobacteria	1.84368	49.7	-	ARBM01	8	1686	1615	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02256419	GCA_000379705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/705/GCA_000379705.1_ASM37970v1	-	DSM 44850
Corynebacterium ciconiae DSM 44920	1121356	PRJNA165375	165375	Terrabacteria group	Actinobacteria	2.54557	62.1	-	AQUW01	22	2229	2148	4/19/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02256507	GCA_000372385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/385/GCA_000372385.1_ASM37238v1	-	DSM 44920
Gemmata sp. SH-PL17	1630693	PRJNA277747	277747	PVC group	Planctomycetes	9.04542	64.2	chromosome:NZ_CP011271.1/CP011271.1	-	1	7574	7312	4/5/16	4/12/17	Complete Genome	NIOO-KNAW	SAMN03417852	GCA_001610855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/855/GCA_001610855.1_ASM161085v1	-	SH-PL17
Corynebacterium ulceribovis DSM 45146	1121370	PRJNA165381	165381	Terrabacteria group	Actinobacteria	2.30045	59.2	-	AQUY01	8	2115	2049	4/19/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02256494	GCA_000372445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/445/GCA_000372445.1_ASM37244v1	-	DSM 45146
Cytophaga aurantiaca DSM 3654	1121373	PRJNA165383	165383	FCB group	Bacteroidetes/Chlorobi group	4.42513	37.1	-	ARBN01	47	3834	3726	4/22/13	5/18/17	Scaffold	DOE Joint Genome Institute	SAMN02256446	GCA_000379725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/725/GCA_000379725.1_ASM37972v1	-	DSM 3654
Flexithrix dorotheae DSM 6795	1121904	PRJNA165391	165391	FCB group	Bacteroidetes/Chlorobi group	9.53682	36.3	-	ARBP01	101	7342	7157	4/22/13	5/18/17	Scaffold	DOE Joint Genome Institute	SAMN02256418	GCA_000379765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/765/GCA_000379765.1_ASM37976v1	-	DSM 6795
Caldibacillus debilis DSM 16016	1121917	PRJNA165395	165395	Terrabacteria group	Firmicutes	3.05952	51.6	-	ARVR01	40	3320	3188	4/25/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02256402	GCA_000383875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/875/GCA_000383875.1_ASM38387v1	-	DSM 16016
Kribbella catacumbae DSM 19601	1122138	PRJNA165397	165397	Terrabacteria group	Actinobacteria	9.62781	67.5	-	AQUZ01	152	8875	8515	4/19/13	5/18/17	Contig	DOE Joint Genome Institute	SAMN02256503	GCA_000372465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/465/GCA_000372465.1_ASM37246v1	-	DSM 19601
Lewinella cohaerens DSM 23179	1122176	PRJNA165399	165399	FCB group	Bacteroidetes/Chlorobi group	7.29882	45	-	ARBR01	89	5522	5373	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02256444	GCA_000379805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/805/GCA_000379805.1_ASM37980v1	-	DSM 23179
Loktanella hongkongensis DSM 17492	1122180	PRJNA183668	183668	Proteobacteria	Alphaproteobacteria	3.18884	68.3812	plasmid pLokhon01:NZ_CM002675.1/CM002675.1; plasmid pLokhon02:NZ_CM002676.1/CM002676.1	APGJ01	8	3121	2993	3/26/14	4/11/17	Scaffold	Leibniz Institute DSMZ Braunschweig	SAMN02951862	GCA_000600975.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/975/GCA_000600975.2_Lokhon	-	DSM 17492
Longispora albida DSM 44784	1122182	PRJNA165405	165405	Terrabacteria group	Actinobacteria	6.82124	70.3	-	ARBS01	27	6331	6164	4/22/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02256442	GCA_000379825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/825/GCA_000379825.1_ASM37982v1	-	DSM 44784
Moraxella boevrei DSM 14165	1122243	PRJNA165407	165407	Proteobacteria	Gammaproteobacteria	2.42721	40.1	-	ARBT01	43	2362	2240	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02256417	GCA_000379845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/845/GCA_000379845.1_ASM37984v1	-	DSM 14165
Mycobacterium hassiacum DSM 44199	1122247	PRJNA165409	165409	Terrabacteria group	Actinobacteria	5.08232	69.4	-	ARBU01	99	4877	4674	4/22/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02256416	GCA_000379865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/865/GCA_000379865.1_ASM37986v1	-	DSM 44199
Nonomuraea coxensis DSM 45129	1122611	PRJNA165411	165411	Terrabacteria group	Actinobacteria	8.99645	72.2	-	ARBV01	101	8475	8107	4/22/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02256440	GCA_000379885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/885/GCA_000379885.1_ASM37988v1	-	DSM 45129
Oligella urethralis DSM 7531	1122620	PRJNA165415	165415	Proteobacteria	Betaproteobacteria	2.31161	46.4	-	AQVB01	46	2182	2068	4/19/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02256493	GCA_000372065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/065/GCA_000372065.1_ASM37206v1	-	DSM 7531
Rodentibacter pneumotropicus DSM 21403	1122936	PRJNA165419	165419	Proteobacteria	Gammaproteobacteria	2.25717	39.8	-	ARBW01	22	2149	2009	4/22/13	3/2/17	Scaffold	DOE Joint Genome Institute	SAMN02256441	GCA_000379905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/905/GCA_000379905.1_ASM37990v1	-	DSM 21403
Porphyromonas levii DSM 23370	1122973	PRJNA165421	165421	FCB group	Bacteroidetes/Chlorobi group	2.51648	45.7	-	ARBX01	124	2197	2037	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02256439	GCA_000379925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/925/GCA_000379925.1_ASM37992v1	-	DSM 23370
Porphyromonas macacae DSM 20710 = JCM 13914	1122974	PRJNA165423	165423	FCB group	Bacteroidetes/Chlorobi group	2.21453	43.6	-	ARBY01	31	1904	1809	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02256414	GCA_000379945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/945/GCA_000379945.1_ASM37994v1	-	DSM 20710
Butyricimonas synergistica DSM 23225	1121129	PRJNA165367	165367	FCB group	Bacteroidetes/Chlorobi group	4.77084	44.8	-	ARBK01	16	3870	3748	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02256450	GCA_000379665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/665/GCA_000379665.1_ASM37966v1	-	DSM 23225
Porphyromonas somerae DSM 23386	1122975	PRJNA165425	165425	FCB group	Bacteroidetes/Chlorobi group	2.35668	47.1	-	AQVC01	95	2002	1875	4/19/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02256491	GCA_000372405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/405/GCA_000372405.1_ASM37240v1	-	DSM 23386
Shimazuella kribbensis DSM 45090	1123252	PRJNA165431	165431	Terrabacteria group	Firmicutes	4.1851	38.4	-	ATZF01	42	4259	4069	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441224	GCA_000428065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/065/GCA_000428065.1_ASM42806v1	-	DSM 45090
Streptococcus caballi DSM 19004	1123298	PRJNA165433	165433	Terrabacteria group	Firmicutes	2.12204	40.4	-	ARCA01	62	2164	1959	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02256438	GCA_000379985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/985/GCA_000379985.1_ASM37998v1	-	DSM 19004
Streptococcus didelphis DSM 15616	1123301	PRJNA165435	165435	Terrabacteria group	Firmicutes	1.87744	35.8	-	ARCB01	15	1826	1706	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02256413	GCA_000380005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/005/GCA_000380005.1_ASM38000v1	-	DSM 15616
Streptococcus entericus DSM 14446	1123302	PRJNA165437	165437	Terrabacteria group	Firmicutes	2.03647	44.6	-	ARCC01	33	2062	1948	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02256412	GCA_000380025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/025/GCA_000380025.1_ASM38002v1	-	DSM 14446
Streptococcus ferus DSM 20646	1123303	PRJNA165439	165439	Terrabacteria group	Firmicutes	1.84734	42.7	-	AQVD01	12	1868	1770	4/19/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02256504	GCA_000372425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/425/GCA_000372425.1_ASM37242v1	-	DSM 20646
Streptococcus marimammalium DSM 18627	1123306	PRJNA165441	165441	Terrabacteria group	Firmicutes	1.50544	33.2	-	ARCD01	25	1483	1372	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02256437	GCA_000380045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/045/GCA_000380045.1_ASM38004v1	-	DSM 18627
Streptococcus merionis DSM 19192	1123308	PRJNA165445	165445	Terrabacteria group	Firmicutes	2.35734	41.7	-	ARCF01	24	2220	2101	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02256436	GCA_000380085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/085/GCA_000380085.1_ASM38008v1	-	DSM 19192
Streptococcus orisratti DSM 15617	1123311	PRJNA165447	165447	Terrabacteria group	Firmicutes	2.41613	38.5	-	ARCG01	90	2394	2186	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02256410	GCA_000380105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/105/GCA_000380105.1_ASM38010v1	-	DSM 15617
Streptococcus ovis DSM 16829	1123312	PRJNA165449	165449	Terrabacteria group	Firmicutes	2.35854	40.1	-	ARCH01	24	2407	2283	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02256411	GCA_000380125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/125/GCA_000380125.1_ASM38012v1	-	DSM 16829
Streptococcus thoraltensis DSM 12221	1123318	PRJNA165451	165451	Terrabacteria group	Firmicutes	2.38522	38.4	-	ARCI01	48	2244	2086	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02256409	GCA_000380145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/145/GCA_000380145.1_ASM38014v1	-	DSM 12221
Streptomyces scabrisporus DSM 41855	1123320	PRJNA165453	165453	Terrabacteria group	Actinobacteria	11.3927	70.9	-	ARCJ01	191	9975	9338	4/19/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02256465	GCA_000372745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/745/GCA_000372745.1_ASM37274v1	-	DSM 41855
Prevotella nanceiensis DSM 19126 = JCM 15639	1122988	PRJNA165427	165427	FCB group	Bacteroidetes/Chlorobi group	2.65011	38.4	-	ARBZ01	12	2067	1972	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02256415	GCA_000379965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/965/GCA_000379965.1_ASM37996v1	-	DSM 19126
Thiothrix disciformis DSM 14473	1123399	PRJNA165455	165455	Proteobacteria	Gammaproteobacteria	3.92395	45.1	-	AQVE01	71	3820	3660	4/19/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02256490	GCA_000371925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/925/GCA_000371925.1_ASM37192v1	-	DSM 14473
Streptomyces vitaminophilus DSM 41686	1123322	PRJNA165457	165457	Terrabacteria group	Actinobacteria	6.42989	72	-	ARCK01	112	5531	5244	4/22/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02256407	GCA_000380165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/165/GCA_000380165.1_ASM38016v1	-	DSM 41686
Methylosarcina fibrata AML-C10	1132443	PRJNA165581	165581	Proteobacteria	Gammaproteobacteria	4.97846	54.1	-	ARCU01	2	4436	4271	4/19/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02256430	GCA_000372865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/865/GCA_000372865.1_ASM37286v1	-	AML-C10
Methylotenera sp. 1P/1	1131551	PRJNA165587	165587	Proteobacteria	Betaproteobacteria	2.74752	45.6	-	ARWC01	1	2636	2572	4/26/13	6/20/17	Contig	DOE Joint Genome Institute	SAMN02256394	GCA_000384355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/355/GCA_000384355.1_ASM38435v1	-	1P/1
SAR324 cluster bacterium SCGC AB-629-J17	1131278	PRJNA165619	165619	Proteobacteria	delta/epsilon subdivisions	1.38766	39.3	-	AQVW01	415	-	-	4/20/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02256480	GCA_000375785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/785/GCA_000375785.1_ASM37578v1	-	SCGC AB-629-J17
SAR324 cluster bacterium SCGC AB-629-O05	1131279	PRJNA165621	165621	Proteobacteria	delta/epsilon subdivisions	0.863261	40.7	-	AQVX01	192	-	-	4/20/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02256473	GCA_000375805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/805/GCA_000375805.1_ASM37580v1	-	SCGC AB-629-O05
Marinimicrobia bacterium SCGC AB-629-J13	1131273	PRJNA165623	165623	FCB group	Candidatus Marinimicrobia	1.93395	37.8	-	AQVY01	251	-	-	4/20/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02256470	GCA_000375825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/825/GCA_000375825.1_ASM37582v1	-	SCGC AB-629-J13
Afipia massiliensis	211460	PRJNA281679	281679	Proteobacteria	Alphaproteobacteria	4.50619	61.4	-	LBIA01	3	4309	4202	5/13/15	4/17/17	Contig	Monash University Malaysia	SAMN03493436	GCA_001006325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/325/GCA_001006325.1_ASM100632v1	-	LC387
Tsukamurella sp. 1534	1151061	PRJEB87	169195	Terrabacteria group	Actinobacteria	4.5034	71	-	CAJY01	4	4392	4250	6/19/12	5/19/17	Scaffold	URMITE	SAMEA2272095	GCA_000312385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/385/GCA_000312385.1_ASM31238v1	-	1534
Afipia birgiae 34632	1197906	PRJEB78	169198	Proteobacteria	Alphaproteobacteria	5.33415	60.8	-	CAJQ02	5	5166	4871	6/12/12	4/17/17	Scaffold	URMITE	SAMEA2272295	GCA_000308295.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/295/GCA_000308295.2_Ab_34632	23209256	34632
Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529	1211035	PRJNA239540	239540	Terrabacteria group	Firmicutes	3.99991	34.7	-	JPVQ01	156	3841	3737	11/6/14	4/17/17	Contig	Huazhong Agricultural University	SAMN02953200	GCA_000772965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/965/GCA_000772965.1_ASM77296v1	-	CCUG 49529
Thiothrix flexilis DSM 14609	1123400	PRJNA165461	165461	Proteobacteria	Gammaproteobacteria	3.78763	44.4	-	ARCL01	72	3547	3395	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02256434	GCA_000380185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/185/GCA_000380185.1_ASM38018v1	-	DSM 14609
Acetobacterium dehalogenans DSM 11527	1068975	PRJNA165505	165505	Terrabacteria group	Firmicutes	4.05007	43.8	-	AXAC01	76	3762	3590	9/30/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440712	GCA_000472665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/665/GCA_000472665.1_ASM47266v1	-	DSM 11527
Ancylobacter sp. FA202	1111106	PRJNA165513	165513	Proteobacteria	Alphaproteobacteria	5.35455	67.3	-	ARCM01	3	4915	4754	4/22/13	5/18/17	Scaffold	DOE Joint Genome Institute	SAMN02256408	GCA_000380205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/205/GCA_000380205.1_ASM38020v1	-	FA202
Caloramator sp. ALD01	1031288	PRJNA165521	165521	Terrabacteria group	Firmicutes	2.53077	31.4	-	AXAA01	65	2469	2348	9/30/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440782	GCA_000472625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/625/GCA_000472625.1_ASM47262v1	-	ALD01
Methylocystis rosea SV97	1132444	PRJNA165573	165573	Proteobacteria	Alphaproteobacteria	3.91205	62.5	-	ARCT01	2	3895	3709	4/19/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02256431	GCA_000372845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/845/GCA_000372845.1_ASM37284v1	-	SV97
Methylopila sp. M107	1101190	PRJNA165579	165579	Proteobacteria	Alphaproteobacteria	4.45349	68	-	ARWB01	1	4177	4087	4/26/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02256399	GCA_000384475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/475/GCA_000384475.1_ASM38447v1	-	M107
Rhodopirellula sp. SWK7	595460	PRJNA182911	182911	PVC group	Planctomycetes	8.77707	56	-	ANOQ01	141	6639	6432	3/14/13	5/19/17	Contig	Microbial Interactions in MArine Systems (MIMAS)	SAMN02261083	GCA_000346425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/425/GCA_000346425.1_ASM34642v1	23273849	SWK7
Moritella marina ATCC 15381	1202962	PRJNA185233	185233	Proteobacteria	Gammaproteobacteria	4.64678	40.5	-	ARMR01	58	4180	4030	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441661	GCA_000381865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/865/GCA_000381865.1_ASM38186v1	-	MP-1
Legionella sp. 39-23	1895902	PRJNA279279	279279	Proteobacteria	Gammaproteobacteria	4.16732	38.6	-	MKTO01	49	3698	3582	12/9/16	12/9/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN05660557	GCA_001897665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/665/GCA_001897665.1_ASM189766v1	-	-
Corynebacterium timonense 5401744	1203190	PRJEB67	169192	Terrabacteria group	Actinobacteria	2.59042	66.6	-	CAJP01	18	2427	2270	7/25/12	4/8/17	Scaffold	URMITE	SAMEA2271986	GCA_000312345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/345/GCA_000312345.1_ASM31234v1	-	5401744
Methyloferula stellata AR4	876269	PRJNA165575	165575	Proteobacteria	Alphaproteobacteria	4.23545	59.5	-	ARWA01	1	3961	3877	4/26/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02256400	GCA_000385335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/335/GCA_000385335.1_ASM38533v1	25745010	AR4T
Corynebacterium halotolerans	225326	PRJNA267549	267549	Terrabacteria group	Actinobacteria	3.15482	70.1	-	JVMD01	37	2752	2633	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197499	GCA_001056295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/295/GCA_001056295.1_ASM105629v1	26230489	307_CHAL
Fibrisoma limi BUZ 3	1185876	PRJEB30	169183	FCB group	Bacteroidetes/Chlorobi group	7.62697	52.7125	plasmid pFLIM01:NC_019017.1/HE805916.1; plasmid pFLIM02:NC_019015.1/HE805917.1; plasmid pFLIM03:NC_019016.1/HE805918.1	CAIT01	14	6331	6209	5/11/12	5/18/17	Contig	"CeBiTec, Bielefeld University"	SAMEA2272395	GCA_000296815.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/815/GCA_000296815.2_ASM29681v2	22843583	BUZ 3
Helcobacillus massiliensis	521392	PRJEB10922	297014	Terrabacteria group	Actinobacteria	2.232	63.4	-	CYUG01	17	2032	1891	9/23/15	4/16/17	Contig	URMITE	SAMEA3546015	GCA_001403775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/403/775/GCA_001403775.1_Dermabacter_indicis	-	FF11
Paenibacillus massiliensis 2301065 = DSM 16942	1122921	PRJNA177734	177734	Terrabacteria group	Firmicutes	6.3858	48.5	-	ARIL01	36	5504	5313	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441001	GCA_000377505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/505/GCA_000377505.1_ASM37750v1	-	DSM 16942
Brevibacterium linens	1703	PRJNA314739	314739	Terrabacteria group	Actinobacteria	3.86224	64.2	chromosome:NZ_CP014869.1/CP014869.1	-	1	3426	3316	4/4/16	4/12/17	Complete Genome	"Institute of Oceanology, Chinese Academy of Sciences"	SAMN04569174	GCA_001606005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/005/GCA_001606005.1_ASM160600v1	-	BS258
Paenibacillus sanguinis 2301083 = DSM 16941	1122925	PRJNA175158	175158	Terrabacteria group	Firmicutes	4.80414	49.3	-	ARGO01	36	4448	4266	4/19/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02441367	GCA_000374825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/825/GCA_000374825.1_ASM37482v1	-	DSM 16941
Lactobacillus hominis DSM 23910 = CRBIP 24.179	1423758	PRJEB105	169209	Terrabacteria group	Firmicutes	1.92813	35.1	-	CAKE01	36	1914	1793	7/4/12	4/7/17	Contig	Sycou	SAMEA2272002	GCA_000296835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/835/GCA_000296835.1_ASM29683v1	-	type strain:CRBIP 24.179
Lactobacillus gigeriorum DSM 23908 = CRBIP 24.85	1423751	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.90603	36.9	-	AYZO01	116	1870	1748	11/6/15	4/11/17	Contig	Shanghai Majorbio	SAMN02369397	GCA_001436575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/575/GCA_001436575.1_ASM143657v1	26415554	DSM 23908
Reyranella massiliensis 521	1205680	PRJEB111	169215	Proteobacteria	Alphaproteobacteria	5.79226	64.8	-	CAKO01	1	5741	5575	7/18/12	5/19/17	Scaffold	URMITE	SAMEA2272098	GCA_000312425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/425/GCA_000312425.1_ASM31242v1	-	521
Lactobacillus pasteurii DSM 23907 = CRBIP 24.76	1423790	PRJEB103	169220	Terrabacteria group	Firmicutes	1.9054	38.6	-	CAKD01	30	1866	1714	7/4/12	4/7/17	Contig	Sycou	SAMEA2272206	GCA_000297025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/025/GCA_000297025.1_ASM29702v1	-	type strain:CRBIP 24.76
Treponema maltophilum ATCC 51939	1125699	PRJNA169489	169489	Spirochaetes	Spirochaetia	2.53039	47.9	-	ATFF01	1	2351	2260	6/19/13	4/17/17	Scaffold	Broad Institute	SAMN02596987	GCA_000413055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/055/GCA_000413055.1_Trep_malt_ATCC_51939_V1	-	ATCC 51939
Treponema medium ATCC 700293	1125700	PRJNA169490	169490	Spirochaetes	Spirochaetia	2.72751	44.3	-	ATFE01	1	2420	2280	6/19/13	4/17/17	Scaffold	Broad Institute	SAMN02596986	GCA_000413035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/035/GCA_000413035.1_Trep_medi_ATCC_700293_V1	-	ATCC 700293
Pandoraea sp. B-6	1204340	PRJNA169519	169519	Proteobacteria	Betaproteobacteria	5.0355	63.5	-	AKXS01	148	4626	4277	7/30/12	5/19/17	Scaffold	Central South university	SAMN02469430	GCA_000282835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/835/GCA_000282835.1_ASM28283v1	-	B-6
Bartonella rattaustraliani AUST/NH4	1205681	PRJEB118	169221	Proteobacteria	Alphaproteobacteria	2.15844	38.8	-	CALW02	108	1939	1671	8/22/12	4/17/17	Contig	URMITE	SAMEA2272486	GCA_000312565.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/565/GCA_000312565.2_ASM31256v2	23209252	AUST/NH4
Terrisporobacter glycolicus ATCC 14880 = DSM 1288	1121315	PRJNA185566	185566	Terrabacteria group	Firmicutes	4.02046	28.4	-	AUUB01	17	3848	3749	7/19/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440708	GCA_000439105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/105/GCA_000439105.1_ASM43910v1	-	DSM 1288
Dermabacter sp. HFH0086	1203568	PRJNA169448	169448	Terrabacteria group	Actinobacteria	2.37774	62.7	-	ATFO01	1	2136	2040	6/21/13	4/17/17	Scaffold	Broad Institute	SAMN02596992	GCA_000413375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/375/GCA_000413375.1_Derm_sp_HFH0086_V1	-	HFH0086
Halomonas titanicae BH1	1204738	PRJNA169611	169611	Proteobacteria	Gammaproteobacteria	5.33979	54.6	-	AOPO01	48	4922	4753	2/4/13	5/18/17	Contig	University of Sevilla	SAMN02471939	GCA_000336575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/575/GCA_000336575.1_HalTitan1.0	23516210	BH1
Mariprofundus sp. UBA1571	1946831	PRJNA348753	348753	Proteobacteria	Zetaproteobacteria	2.53314	48.7	-	DCOL01	222	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452381	GCA_002322395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/395/GCA_002322395.1_ASM232239v1	28894102	-
Mycobacterium abscessus	36809	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.18851	64.2	chromosome:NZ_CP014956.1/CP014956.1	-	1	5203	5117	4/4/16	3/19/17	Complete Genome	University of Michigan Medical School	SAMN04572939	GCA_001606315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/315/GCA_001606315.1_ASM160631v1	-	FLAC029
Mycobacterium abscessus	36809	PRJNA315990	315990	Terrabacteria group	Actinobacteria	4.93923	64.2	chromosome:NZ_CP014959.1/CP014959.1	-	1	4933	4808	4/4/16	3/19/17	Complete Genome	University of Michigan Medical School	SAMN04572942	GCA_001610635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/635/GCA_001610635.1_ASM161063v1	-	FLAC048
Mycobacterium abscessus	36809	PRJNA315990	315990	Terrabacteria group	Actinobacteria	4.7998	64.2	chromosome:NZ_CP014960.1/CP014960.1	-	1	4756	4657	4/4/16	3/19/17	Complete Genome	University of Michigan Medical School	SAMN04572943	GCA_001610655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/655/GCA_001610655.1_ASM161065v1	-	FLAC049
Leptotrichia shahii DSM 19757	1122172	PRJNA169703	169703	Fusobacteria	Fusobacteriia	2.14461	29.5	-	ARDD01	20	2009	1905	4/19/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440425	GCA_000373045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/045/GCA_000373045.1_ASM37304v1	-	DSM 19757
Lewinella persica DSM 23188	1122179	PRJNA169708	169708	FCB group	Bacteroidetes/Chlorobi group	7.08277	51.6	-	ARDG01	85	5285	5145	4/19/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441042	GCA_000373105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/105/GCA_000373105.1_ASM37310v1	-	DSM 23188
Mycobacterium abscessus	36809	PRJNA295901	295901	Terrabacteria group	Actinobacteria	5.17314	64.2	chromosome:NZ_CP013049.1/CP013049.1	-	1	5208	4922	11/3/15	3/18/17	Complete Genome	Novosibirsk Research Institute of Tuberculosis	SAMN04103082	GCA_001430775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/430/775/GCA_001430775.1_ASM143077v1	26744369	NOV0213
Desulfurispora thermophila DSM 16022	1121472	PRJNA169736	169736	Terrabacteria group	Firmicutes	2.82158	55.2	-	AQWN01	19	2772	2661	4/20/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440407	GCA_000376385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/385/GCA_000376385.1_ASM37638v1	-	DSM 16022
Alkalispirochaeta alkalica DSM 8900	942938	PRJNA169743	169743	Spirochaetes	Spirochaetia	3.35831	60.5	-	AREC01	71	2892	2766	4/19/13	8/15/17	Scaffold	DOE Joint Genome Institute	SAMN02440429	GCA_000373545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/545/GCA_000373545.1_ASM37354v1	-	DSM 8900
Thiomicrorhabdus chilensis DSM 12352	1123515	PRJNA169748	169748	Proteobacteria	Gammaproteobacteria	2.44303	48.1	-	AXZC01	2	2263	2202	10/25/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440742	GCA_000483485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/485/GCA_000483485.1_ASM48348v1	-	DSM 12352
Pseudomonas sp. CCOS 191	1649877	PRJEB9005	280074	Proteobacteria	Gammaproteobacteria	6.01295	64.2	chromosome I:NZ_LN847264.1/LN847264.1	-	1	5466	5279	5/9/15	4/10/17	Complete Genome	JLU	SAMEA3360421	GCA_001007005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/005/GCA_001007005.1_Pseudomonas_sp._strain_CCOS_191	-	CCOS 191
Meiothermus timidus DSM 17022	1122223	PRJNA169719	169719	Terrabacteria group	Deinococcus-Thermus	3.19063	65.3	-	ARDL01	17	3132	3021	4/19/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441032	GCA_000373205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/205/GCA_000373205.1_ASM37320v1	-	DSM 17022
Echinicola pacifica DSM 19836	1121859	PRJNA169722	169722	FCB group	Bacteroidetes/Chlorobi group	5.4422	43.8	-	ARDN01	23	4122	3998	4/19/13	5/18/17	Scaffold	DOE Joint Genome Institute	SAMN02441711	GCA_000373245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/245/GCA_000373245.1_ASM37324v1	-	DSM 19836
Pontibacter roseus DSM 17521	1122967	PRJNA169723	169723	FCB group	Bacteroidetes/Chlorobi group	4.58148	52.7	-	ARDO01	12	4004	3941	4/19/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441712	GCA_000373265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/265/GCA_000373265.1_ASM37326v1	-	DSM 17521
Thiobacillus thioparus DSM 505	1123393	PRJNA169730	169730	Proteobacteria	Betaproteobacteria	3.20152	62.3	-	ARDU01	18	3168	3071	4/19/13	6/20/17	Scaffold	DOE Joint Genome Institute	SAMN02441034	GCA_000373385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/385/GCA_000373385.1_ASM37338v1	-	DSM 505
Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896	1121022	PRJNA169732	169732	Proteobacteria	Alphaproteobacteria	4.98707	58.4	-	AQWM01	100	4583	4377	4/20/13	5/18/17	Contig	DOE Joint Genome Institute	SAMN02440406	GCA_000376105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/105/GCA_000376105.1_ASM37610v1	-	DSM 16100
Thermoanaerobacter indiensis BSB-33	1125975	PRJNA169716	169716	Terrabacteria group	Firmicutes	2.59761	34.2	-	ARDJ01	1	2595	2371	4/19/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441722	GCA_000373165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/165/GCA_000373165.1_ASM37316v1	-	BSB-33
Prevotella paludivivens DSM 17968 = JCM 13650	1122990	PRJNA169717	169717	FCB group	Bacteroidetes/Chlorobi group	3.45583	37.3	-	ARDK01	61	2732	2613	4/19/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441031	GCA_000373185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/185/GCA_000373185.1_ASM37318v1	-	DSM 17968
Porphyromonas bennonis DSM 23058 = JCM 16335	1122971	PRJNA169760	169760	FCB group	Bacteroidetes/Chlorobi group	2.02324	56.3	-	AQWR01	87	1650	1550	4/20/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441061	GCA_000375645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/645/GCA_000375645.1_ASM37564v1	-	DSM 23058
Acinetobacter bouvetii DSM 14964 = CIP 107468	1120925	PRJNA183279	183279	Proteobacteria	Gammaproteobacteria	3.38882	45	-	APQD01	6	3235	3073	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01087847	GCA_000368865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/865/GCA_000368865.1_Acin_bouv_CIP_107468_V1	-	CIP 107468
Bacteroides propionicifaciens DSM 19291 = JCM 14649	1121099	PRJNA169763	169763	FCB group	Bacteroidetes/Chlorobi group	2.63469	38	-	AQWS01	72	2284	2144	4/20/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441390	GCA_000375405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/405/GCA_000375405.1_ASM37540v1	-	DSM 19291
Pasteurella testudinis DSM 23072	1122938	PRJEB20245	381567	Proteobacteria	Gammaproteobacteria	2.91873	47.3	-	FWWV01	69	2830	2681	4/6/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660772	GCA_900176075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/075/GCA_900176075.1_IMG-taxon_2528768223_annotated_assembly	-	DSM 23072
Erysipelothrix tonsillarum DSM 14972	1121874	PRJNA169768	169768	Terrabacteria group	Firmicutes	1.93102	36.8	-	AREO01	4	1847	1754	4/19/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440433	GCA_000373785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/785/GCA_000373785.1_ASM37378v1	-	DSM 14972
Corynebacterium pilosum DSM 20521	1121366	PRJNA169769	169769	Terrabacteria group	Actinobacteria	2.53163	60.7	-	AREP01	35	2408	2288	4/19/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441706	GCA_000373805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/805/GCA_000373805.1_ASM37380v1	-	DSM 20521
Oligella ureolytica DSM 18253	1122619	PRJNA169764	169764	Proteobacteria	Betaproteobacteria	2.6683	44.6	-	AREM01	98	2636	2429	4/19/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441372	GCA_000373745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/745/GCA_000373745.1_ASM37374v1	-	DSM 18253
Legionella shakespearei DSM 23087	1122169	PRJNA169766	169766	Proteobacteria	Gammaproteobacteria	3.51268	41.7	-	AREN01	57	3064	2947	4/19/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440432	GCA_000373765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/765/GCA_000373765.1_ASM37376v1	-	DSM 23087
Saccharomonospora sp. CNQ490	1137271	PRJNA169795	169795	Terrabacteria group	Actinobacteria	4.94169	71.1	-	AZUM01	25	4565	4415	1/3/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02597191	GCA_000527075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/075/GCA_000527075.1_ASM52707v1	-	CNQ490
Thermus igniterrae ATCC 700962	1123388	PRJNA169797	169797	Terrabacteria group	Deinococcus-Thermus	2.22598	68.8	-	AQWU01	74	2382	2228	4/20/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440410	GCA_000376265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/265/GCA_000376265.1_ASM37626v1	-	ATCC 700962
Blautia producta ATCC 27340 = DSM 2950	1121114	PRJNA169801	169801	Terrabacteria group	Firmicutes	6.08569	45.7	-	ARET01	68	5665	5390	4/19/13	5/18/17	Scaffold	DOE Joint Genome Institute	SAMN02441708	GCA_000373885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/885/GCA_000373885.1_ASM37388v1	-	ATCC 27340
Wohlfahrtiimonas chitiniclastica	400946	PRJNA315088	315088	Proteobacteria	Gammaproteobacteria	2.18198	43.5	-	LVXD01	2	2115	1853	4/26/16	4/12/17	Contig	Key Laboratory of Jilin Province for Zoonosis Prevention and Control	SAMN04549360	GCA_001632485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/485/GCA_001632485.1_ASM163248v1	27365357	BM-Y
Corynebacterium mastitidis DSM 44356	1121365	PRJNA169809	169809	Terrabacteria group	Actinobacteria	2.37	69	-	AQXB01	39	2255	2145	4/20/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441393	GCA_000375365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/365/GCA_000375365.1_ASM37536v1	-	DSM 44356
Actinopolymorpha alba DSM 45243	1120950	PRJNA169810	169810	Terrabacteria group	Actinobacteria	7.98371	67.9	-	AREV01	127	7341	6928	4/19/13	5/18/17	Scaffold	DOE Joint Genome Institute	SAMN02440435	GCA_000373925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/925/GCA_000373925.1_ASM37392v1	-	DSM 45243
Corynebacterium propinquum DSM 44285	1121367	PRJNA169811	169811	Terrabacteria group	Actinobacteria	2.45864	56.4	-	AQXC01	22	2228	2101	4/20/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441734	GCA_000375525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/525/GCA_000375525.1_ASM37552v1	-	DSM 44285
Uliginosibacterium gangwonense DSM 18521	1123487	PRJNA169814	169814	Proteobacteria	Betaproteobacteria	5.02171	56.6	-	AREX01	35	4622	4467	4/19/13	6/20/17	Scaffold	DOE Joint Genome Institute	SAMN02441373	GCA_000373965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/965/GCA_000373965.1_ASM37396v1	-	DSM 18521
Aureimonas ureilytica	401562	PRJNA278209	278209	Proteobacteria	Alphaproteobacteria	5.01235	65.3	-	LDQA01	183	4650	4448	12/22/15	4/11/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401374	GCA_001475935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/935/GCA_001475935.1_ASM147593v1	26793183	NS365
Gracilimonas tropica DSM 19535	1121930	PRJNA169820	169820	Balneolaeota	Balneolia	3.83124	42.9	-	AQXG01	48	3386	3295	4/20/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440412	GCA_000375425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/425/GCA_000375425.1_ASM37542v1	-	DSM 19535
Kiloniella laminariae DSM 19542	1122135	PRJNA169821	169821	Proteobacteria	Alphaproteobacteria	4.43894	51.4	-	AREZ01	38	4196	4094	4/19/13	5/18/17	Scaffold	DOE Joint Genome Institute	SAMN02441694	GCA_000374005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/005/GCA_000374005.1_ASM37400v1	-	DSM 19542
Spirosoma panaciterrae DSM 21099	1123277	PRJNA169822	169822	FCB group	Bacteroidetes/Chlorobi group	8.12928	48.9	-	ARFA01	73	6716	6525	4/19/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02441375	GCA_000374025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/025/GCA_000374025.1_ASM37402v1	-	DSM 21099
Segetibacter koreensis DSM 18137	1123248	PRJNA169823	169823	FCB group	Bacteroidetes/Chlorobi group	6.10789	37.4	-	ARFB01	73	5104	4895	4/19/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440437	GCA_000374045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/045/GCA_000374045.1_ASM37404v1	-	DSM 18137
Balneola vulgaris DSM 17893	1121104	PRJNA169824	169824	Balneolaeota	Balneolia	2.85775	39.8	-	AQXH01	18	2500	2429	4/20/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440413	GCA_000375465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/465/GCA_000375465.1_ASM37546v1	-	DSM 17893
Spirosoma luteum DSM 19990	1123276	PRJNA169825	169825	FCB group	Bacteroidetes/Chlorobi group	6.61358	50.7	-	ARFC01	69	5591	5365	4/19/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02441024	GCA_000374065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/065/GCA_000374065.1_ASM37406v1	-	DSM 19990
Spirosoma spitsbergense DSM 19989	1123278	PRJNA169826	169826	FCB group	Bacteroidetes/Chlorobi group	7.54798	50.4	-	ARFD01	238	6521	6173	4/19/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441695	GCA_000374085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/085/GCA_000374085.1_ASM37408v1	-	DSM 19989
Kangiella aquimarina DSM 16071	1122134	PRJNA169827	169827	Proteobacteria	Gammaproteobacteria	2.6818	43.7	-	ARFE01	3	2509	2455	4/19/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441025	GCA_000374105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/105/GCA_000374105.1_ASM37410v1	-	DSM 16071
Niabella aurantiaca DSM 17617	1122605	PRJNA169829	169829	FCB group	Bacteroidetes/Chlorobi group	5.92744	48.6	-	ARFF01	25	4978	4853	4/19/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441376	GCA_000374125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/125/GCA_000374125.1_ASM37412v1	-	DSM 17617
Neomegalonema perideroedes DSM 15528	1122218	PRJNA169830	169830	Proteobacteria	Alphaproteobacteria	3.40995	67.2	-	ARFG01	17	3113	3024	4/19/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441696	GCA_000374145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/145/GCA_000374145.1_ASM37414v1	-	DSM 15528
Pseudaminobacter salicylatoxidans KCT001	1192868	PRJEB41	169886	Proteobacteria	Alphaproteobacteria	4.61241	62.8	-	CAIU01	53	4443	3981	6/1/12	5/19/17	Contig	Bose Inst	SAMEA2271990	GCA_000304395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/395/GCA_000304395.1_KCT001.1	-	KCT001
Prevotella conceptionensis 9403948	1197728	PRJEB56	169890	FCB group	Bacteroidetes/Chlorobi group	4.08012	46.9	-	CAJK01	102	3300	2715	6/8/12	4/17/17	Scaffold	URMITE	SAMEA2272768	GCA_000312305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/305/GCA_000312305.1_ASM31230v1	-	9403948
Yersinia massiliensis CCUG 53443	1205683	PRJEB119	169899	Proteobacteria	Gammaproteobacteria	5.05028	47.3	-	CAKR01	22	4643	4456	7/23/12	4/8/17	Scaffold	URMITE	SAMEA2272758	GCA_000312485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/485/GCA_000312485.1_ASM31248v1	-	CCUG 53443
Desulfobacter curvatus DSM 3379	1121396	PRJNA169816	169816	Proteobacteria	delta/epsilon subdivisions	5.64428	46.9	-	AREY01	234	4952	4711	4/19/13	5/18/17	Scaffold	DOE Joint Genome Institute	SAMN02441374	GCA_000373985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/985/GCA_000373985.1_ASM37398v1	-	DSM 3379
Desulfovibrio oxyclinae DSM 11498	1121459	PRJNA169818	169818	Proteobacteria	delta/epsilon subdivisions	3.32458	59.1	-	AQXE01	32	3144	3042	4/20/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441051	GCA_000375485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/485/GCA_000375485.1_ASM37548v1	-	DSM 11498
Kordiimonas gwangyangensis DSM 19435 = JCM 12864	1122137	PRJNA169819	169819	Proteobacteria	Alphaproteobacteria	4.08225	57.5	-	AQXF01	13	3750	3653	4/20/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441395	GCA_000375545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/545/GCA_000375545.1_ASM37554v1	-	DSM 19435
Dyella jiangningensis	1379159	PRJNA240144	240144	Proteobacteria	Gammaproteobacteria	5.39699	64.2	chromosome:NZ_CP007444.1/CP007444.1	-	1	4807	4705	4/17/14	4/9/17	Complete Genome	Nanjing Agricultural University	SAMN02673293	GCA_000632805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/805/GCA_000632805.1_ASM63280v1	24831147	SBZ 3-12
Corynebacterium urealyticum DSM 7111	1267754	PRJNA183484	183484	Terrabacteria group	Actinobacteria	2.31607	64.2	chromosome:NC_020230.1/CP004085.1	-	1	2020	1888	2/6/13	4/8/17	Complete Genome	Center for Biotechnology	SAMN02603063	GCA_000338095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/338/095/GCA_000338095.1_ASM33809v1	23704183	DSM 7111
Pedobacter arcticus A12	1206103	PRJNA169846	169846	FCB group	Bacteroidetes/Chlorobi group	4.22892	36.9	-	AKZJ01	16	3587	3483	10/1/12	5/19/17	Scaffold	Wuhan University	SAMN02469613	GCA_000302595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/595/GCA_000302595.1_ASM30259v1	23144423	A12
Methylobacter sp. BBA5.1	1495064	PRJNA245747	245747	Proteobacteria	Gammaproteobacteria	5.07427	52.2	-	JQKS01	88	4641	4436	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02745761	GCA_000746145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/145/GCA_000746145.1_ASM74614v1	26798114	BBA5.1
Pseudomonas luteola XLDN4-9	1207076	PRJNA170105	170105	Proteobacteria	Gammaproteobacteria	4.6268	54.2	-	ALAT01	231	4412	4200	7/30/12	5/19/17	Contig	Shanghai Jiao Tong University	SAMN02470941	GCA_000282775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/775/GCA_000282775.1_ASM28277v1	23012282	XLDN4-9
Eggerthella lenta DSM 2243	479437	PRJNA21093	21093	Terrabacteria group	Actinobacteria	3.63226	64.2	chromosome:NC_013204.1/CP001726.1	-	1	3146	3057	9/9/09	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002594	GCA_000024265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/265/GCA_000024265.1_ASM2426v1	21304654	DSM 2243
Corynebacterium urealyticum DSM 7109	504474	PRJNA29211	29211	Terrabacteria group	Actinobacteria	2.36922	64.2	chromosome:NC_010545.1/AM942444.1	-	1	2059	1953	4/1/08	4/7/17	Complete Genome	Bielefeld Univ	SAMEA3138282	GCA_000069945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/069/945/GCA_000069945.1_ASM6994v1	18367281	DSM 7109
Parvularcula sp. BBD 1991-13	1852618	PRJNA281489	281489	Proteobacteria	Alphaproteobacteria	4.24001	64.5	-	LYSZ01	36	-	-	6/3/16	6/3/16	Scaffold	University of Michigan	SAMN04939327	GCA_001657385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/385/GCA_001657385.1_ASM165738v1	-	-
Idiomarina xiamenensis 10-D-4	740709	PRJNA170402	170402	Proteobacteria	Gammaproteobacteria	2.89928	49.5	-	AMRG01	77	2710	2580	9/27/12	4/17/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02471167	GCA_000299895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/895/GCA_000299895.1_ASM29989v1	23209204	10-D-4
Oceanibaculum indicum P24	1207063	PRJNA170403	170403	Proteobacteria	Alphaproteobacteria	3.95279	65.5	-	AMRL01	71	3827	3678	9/27/12	4/17/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02471166	GCA_000299935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/935/GCA_000299935.1_ASM29993v1	23209207	P24
Pseudomonas entomophila L48	384676	PRJNA16800	16800	Proteobacteria	Gammaproteobacteria	5.88878	64.2	chromosome:NC_008027.1/CT573326.1	-	1	5223	5064	5/10/06	5/19/17	Complete Genome	Genoscope	SAMEA3138225	GCA_000026105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/105/GCA_000026105.1_ASM2610v1	16699499	L48
Commensalibacter sp. MX01	1208583	PRJNA170329	170329	Proteobacteria	Alphaproteobacteria	2.33265	36.6347	plasmid pA:NZ_ATSX01000011.1/ATSX01000011.1; plasmid pB:NZ_ATSX01000012.1/ATSX01000012.1	ATSX01	12	2114	2036	2/3/14	4/17/17	Contig	Center for Genomic Sciences	SAMN02641486	GCA_000527695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/695/GCA_000527695.1_ASM52769v1	24604647	MX01
Butyricicoccus pullicaecorum 1.2	1203606	PRJNA170345	170345	Terrabacteria group	Firmicutes	3.32572	54	-	AQOB01	4	3192	3044	5/16/13	4/10/17	Scaffold	Broad Institute	SAMN02596945	GCA_000398925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/925/GCA_000398925.1_Buty_pull_1_20_V1	-	1.2
Nocardia asteroides NBRC 15531	1110697	PRJDB6	170142	Terrabacteria group	Actinobacteria	6.95478	69.9	-	BAFO02	39	6351	6181	7/7/12	4/9/17	Contig	National Institute of Technology and Evaluation (NITE)	SAMD00041823	GCA_000308355.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/355/GCA_000308355.2_ASM30835v2	24884595	NBRC 15531
Parabacteroides gordonii DSM 23371	1122931	PRJNA182431	182431	FCB group	Bacteroidetes/Chlorobi group	6.67709	44.4	-	AUAE01	54	5362	5153	7/15/13	6/12/17	Scaffold	DOE Joint Genome Institute	SAMN02440889	GCA_000428565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/565/GCA_000428565.1_ASM42856v1	-	DSM 23371
Thioclava sp. SK-1	1889770	PRJNA338728	338728	Proteobacteria	Alphaproteobacteria	4.28909	57.2	-	MDHA01	106	3990	3786	8/16/16	4/13/17	Contig	The University of Tokyo	SAMN05567575	GCA_001705665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/665/GCA_001705665.1_ASM170566v1	-	SK-1
Alistipes onderdonkii WAL 8169 = DSM 19147	1203611	PRJNA174975	174975	FCB group	Bacteroidetes/Chlorobi group	3.86565	57.8	-	ARFY01	29	3237	3110	4/19/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441364	GCA_000374505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/505/GCA_000374505.1_ASM37450v1	-	DSM 19147
Mycobacterium abscessus subsp. bolletii 50594	1303024	PRJNA191917	191917	Terrabacteria group	Actinobacteria	5.27053	64.176	chromosome:NC_021282.1/CP004374.1; plasmid 1:NC_021278.1/CP004375.1; plasmid 2:NC_021279.1/CP004376.1	-	3	5345	5146	5/22/13	3/15/17	Complete Genome	Seoul National University College of Medicine	SAMN02603852	GCA_000445035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/035/GCA_000445035.1_ASM44503v1	23833135	50594
Citreicella thiooxidans	282683	PRJEB15802	347786	Proteobacteria	Alphaproteobacteria	5.87137	67.3	-	FNAV01	69	5608	5305	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488105	GCA_900102075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/075/GCA_900102075.1_IMG-taxon_2615840719_annotated_assembly	-	DSM 10146
Celeribacter baekdonensis	875171	PRJEB15832	347749	Proteobacteria	Alphaproteobacteria	4.44262	58.1	-	FNBL01	38	4375	4220	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488117	GCA_900102315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/315/GCA_900102315.1_IMG-taxon_2616644820_annotated_assembly	-	DSM 27375
Fabibacter sp. 4D4	1889784	PRJNA338728	338728	FCB group	Bacteroidetes/Chlorobi group	4.57737	41.7	-	MDGP01	4	4101	3963	9/28/16	4/13/17	Contig	The University of Tokyo	SAMN05567581	GCA_001747095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/095/GCA_001747095.1_ASM174709v1	-	4D4
Nocardia aobensis NBRC 100429	1206720	PRJDB116	170623	Terrabacteria group	Actinobacteria	7.54806	68	-	BAFQ01	298	6982	6553	7/13/12	5/19/17	Contig	National Institute of Technology and Evaluation	SAMD00041780	GCA_000308375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/375/GCA_000308375.1_ASM30837v1	-	NBRC 100429
Nocardia asiatica NBRC 100129	1206721	PRJDB117	170624	Terrabacteria group	Actinobacteria	8.46132	68.4	-	BAFS01	475	7932	7334	7/13/12	5/19/17	Contig	National Institute of Technology and Evaluation	SAMD00041765	GCA_000308415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/415/GCA_000308415.1_ASM30841v1	-	NBRC 100129
Nocardia araoensis NBRC 100135	1206722	PRJDB118	170625	Terrabacteria group	Actinobacteria	7.72254	68.4	-	BAFR01	352	7118	6639	7/13/12	5/19/17	Contig	National Institute of Technology and Evaluation	SAMD00041768	GCA_000308435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/435/GCA_000308435.1_ASM30843v1	-	NBRC 100135
Nocardia abscessus NBRC 100374	1206723	PRJDB119	170626	Terrabacteria group	Actinobacteria	8.4104	68.2	-	BAFP01	274	7748	7296	7/13/12	5/19/17	Contig	National Institute of Technology and Evaluation	SAMD00041774	GCA_000308455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/455/GCA_000308455.1_ASM30845v1	-	NBRC 100374
Nocardia brevicatena NBRC 12119	1206725	PRJDB121	170628	Terrabacteria group	Actinobacteria	7.00717	67	-	BAFU01	248	6595	5991	7/13/12	5/19/17	Contig	National Institute of Technology and Evaluation	SAMD00041812	GCA_000308495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/495/GCA_000308495.1_ASM30849v1	-	NBRC 12119
Nocardia carnea NBRC 14403	1206726	PRJDB122	170629	Terrabacteria group	Actinobacteria	7.49294	67.1	-	BAFV01	126	6875	6580	7/13/12	5/19/17	Contig	National Institute of Technology and Evaluation	SAMD00041818	GCA_000308515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/515/GCA_000308515.1_ASM30851v1	-	NBRC 14403
Cellvibrio mixtus subsp. mixtus J3-8	1209072	PRJNA168594	168594	Proteobacteria	Gammaproteobacteria	5.18371	46.7	-	ALBT01	50	4365	4203	10/15/14	4/17/17	Scaffold	National University of Singapore	SAMN03107408	GCA_000766945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/766/945/GCA_000766945.1_CelMixJ3-8_1.0	25502674	J3-8
Nocardia cerradoensis NBRC 101014	1206727	PRJDB123	170630	Terrabacteria group	Actinobacteria	7.60233	68.2	-	BAFW01	388	7135	6674	7/13/12	5/19/17	Contig	National Institute of Technology and Evaluation	SAMD00041789	GCA_000308535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/535/GCA_000308535.1_ASM30853v1	-	NBRC 101014
Nocardia exalbida NBRC 100660	1206729	PRJDB125	170632	Terrabacteria group	Actinobacteria	7.36799	68.6	-	BAFZ01	165	6733	6395	7/13/12	5/19/17	Contig	National Institute of Technology and Evaluation	SAMD00041785	GCA_000308575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/575/GCA_000308575.1_ASM30857v1	-	NBRC 100660
Nocardia higoensis NBRC 100133	1206730	PRJDB126	170633	Terrabacteria group	Actinobacteria	6.98071	69.3	-	BAGA01	185	6308	5985	7/13/12	5/19/17	Contig	National Institute of Technology and Evaluation	SAMD00041767	GCA_000308595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/595/GCA_000308595.1_ASM30859v1	-	NBRC 100133
Nocardia jiangxiensis NBRC 101359	1206731	PRJDB127	170634	Terrabacteria group	Actinobacteria	10.4459	66.8	-	BAGB01	174	9593	9158	7/13/12	5/19/17	Contig	National Institute of Technology and Evaluation	SAMD00041792	GCA_000308615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/615/GCA_000308615.1_ASM30861v1	-	NBRC 101359
Nocardia otitidiscaviarum NBRC 14405	1206732	PRJDB128	170635	Terrabacteria group	Actinobacteria	7.48255	69	-	BAGD01	281	6858	6512	7/13/12	5/19/17	Contig	National Institute of Technology and Evaluation	SAMD00041819	GCA_000308635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/635/GCA_000308635.1_ASM30863v1	-	NBRC 14405
Nocardia niigatensis NBRC 100131	1206733	PRJDB129	170636	Terrabacteria group	Actinobacteria	8.22421	68.2	-	BAGC01	114	7619	7266	7/13/12	5/19/17	Contig	National Institute of Technology and Evaluation	SAMD00041766	GCA_000308655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/655/GCA_000308655.1_ASM30865v1	-	NBRC 100131
Nocardia paucivorans NBRC 100373	1206734	PRJDB130	170637	Terrabacteria group	Actinobacteria	6.00107	66.6	-	BAGE01	128	5350	5048	7/13/12	5/19/17	Contig	National Institute of Technology and Evaluation	SAMD00041773	GCA_000308675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/675/GCA_000308675.1_ASM30867v1	-	NBRC 100373
Nocardia takedensis NBRC 100417	1206735	PRJDB131	170638	Terrabacteria group	Actinobacteria	8.03387	69.5	-	BAGG01	266	7148	6758	7/13/12	5/19/17	Contig	National Institute of Technology and Evaluation	SAMD00041777	GCA_000308695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/695/GCA_000308695.1_ASM30869v1	-	NBRC 100417
Nocardia tenerifensis NBRC 101015	1206736	PRJDB132	170640	Terrabacteria group	Actinobacteria	9.73157	68.4	-	BAGH01	615	9087	8374	7/13/12	5/19/17	Contig	National Institute of Technology and Evaluation	SAMD00041790	GCA_000308715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/715/GCA_000308715.1_ASM30871v1	-	NBRC 101015
Nocardia pneumoniae NBRC 100136	1206737	PRJDB133	170641	Terrabacteria group	Actinobacteria	7.5882	68.1	-	BAGF01	152	6698	6379	7/13/12	5/19/17	Contig	National Institute of Technology and Evaluation	SAMD00041769	GCA_000308755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/755/GCA_000308755.1_ASM30875v1	-	NBRC 100136
Nocardia terpenica	455432	PRJNA309225	309225	Terrabacteria group	Actinobacteria	9.28223	68.5	-	LWGR01	3	8681	8258	4/20/16	4/12/17	Scaffold	University of Tuebingen	SAMN04426989	GCA_001625105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/625/105/GCA_001625105.1_ASM162510v1	-	IFM 0406
Nocardia testacea NBRC 100365	1206739	PRJDB135	170643	Terrabacteria group	Actinobacteria	7.26841	68.5	-	BAGJ01	274	6770	6345	7/13/12	5/19/17	Contig	National Institute of Technology and Evaluation	SAMD00041772	GCA_000308775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/775/GCA_000308775.1_ASM30877v1	-	NBRC 100365
Nocardia thailandica NBRC 100428	1206740	PRJDB136	170644	Terrabacteria group	Actinobacteria	6.82183	71.6	-	BAGK01	312	6485	6081	7/13/12	5/19/17	Contig	National Institute of Technology and Evaluation	SAMD00041779	GCA_000308795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/795/GCA_000308795.1_ASM30879v1	-	NBRC 100428
Nocardia concava NBRC 100430	1206741	PRJDB137	170645	Terrabacteria group	Actinobacteria	8.93335	67.7	-	BAFX01	206	8391	8035	7/13/12	5/19/17	Contig	National Institute of Technology and Evaluation	SAMD00041781	GCA_000308815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/815/GCA_000308815.1_ASM30881v1	-	NBRC 100430
Nocardia vinacea NBRC 16497	1206742	PRJDB138	170646	Terrabacteria group	Actinobacteria	10.1553	65.5	-	BAGN01	429	9269	8683	7/13/12	5/19/17	Contig	National Institute of Technology and Evaluation	SAMD00041831	GCA_000308835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/835/GCA_000308835.1_ASM30883v1	-	NBRC 16497
Nocardia veterana NBRC 100344	1206743	PRJDB139	170647	Terrabacteria group	Actinobacteria	6.78521	68.2	-	BAGM01	210	6163	5833	7/13/12	5/19/17	Contig	National Institute of Technology and Evaluation	SAMD00041771	GCA_000308855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/855/GCA_000308855.1_ASM30885v1	-	NBRC 100344
Nocardia transvalensis NBRC 15921	1206744	PRJDB140	170648	Terrabacteria group	Actinobacteria	8.3833	69.2	-	BAGL01	128	7799	7474	7/13/12	5/19/17	Contig	National Institute of Technology and Evaluation	SAMD00041825	GCA_000308875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/875/GCA_000308875.1_ASM30887v1	-	NBRC 15921
Gordonia hirsuta DSM 44140 = NBRC 16056	1121927	PRJDB142	170671	Terrabacteria group	Actinobacteria	3.48946	68.4	-	BANT01	77	3241	3078	12/28/12	4/8/17	Contig	National Institute of Technology and Evaluation	SAMD00041827	GCA_000333015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/015/GCA_000333015.1_ASM33301v1	-	NBRC 16056
Gordonia namibiensis NBRC 108229	1208314	PRJDB143	170672	Terrabacteria group	Actinobacteria	4.94161	67.6	-	BAHE01	67	4465	4348	9/1/12	5/18/17	Contig	National Institute of Technology and Evaluation	SAMD00041807	GCA_000298235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/235/GCA_000298235.1_ASM29823v1	-	NBRC 108229
Piscicoccus intestinalis NBRC 104926	1208313	PRJDB144	170673	Terrabacteria group	Actinobacteria	4.71321	71.8	-	BCNQ01	336	4284	3866	1/13/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00018689	GCA_001515525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/525/GCA_001515525.1_ASM151552v1	-	NBRC 104926
Bacillus nealsonii AAU1	1202533	PRJNA168247	168247	Terrabacteria group	Firmicutes	4.97839	35.1	-	ASRU01	407	4836	4389	5/23/13	4/17/17	Contig	Anand Agricultural University	SAMN02469633	GCA_000401235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/235/GCA_000401235.1_BacNeaAAU1	-	AAU1
Clostridium sartagoforme AAU1	1202534	PRJNA168248	168248	Terrabacteria group	Firmicutes	3.98337	27.9	-	ASRV01	323	3870	3496	5/23/13	4/17/17	Contig	Anand Agricultural University	SAMN02469632	GCA_000401215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/215/GCA_000401215.1_CloSarAAU1	-	AAU1
Janibacter hoylei PVAS-1	1210046	PRJNA170341	170341	Terrabacteria group	Actinobacteria	3.1391	71.3	-	ALWX01	122	3147	2686	9/17/12	4/17/17	Contig	National Centre for Cell Science	SAMN02470608	GCA_000297495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/495/GCA_000297495.1_ASM29749v1	23144385	PVAS-1
Halogranum salarium B-1	1210908	PRJNA170600	170600	Euryarchaeota	Halobacteria	4.49231	62.2	-	ALJD01	17	4463	4304	8/3/12	5/18/17	Contig	Korea Research Institute of Bioscience and Biotechnology	SAMN02470186	GCA_000283335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/335/GCA_000283335.1_162.HSB1.1	23144405	B-1
Pseudomonas psychrophila	122355	PRJEB16505	349432	Proteobacteria	Gammaproteobacteria	5.32248	57.4	chromosome I:NZ_LT629795.1/LT629795.1	-	1	4880	4667	10/21/16	4/17/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04490201	GCA_900106105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/105/GCA_900106105.1_IMG-taxon_2636416189_annotated_assembly	-	BS3667
Pseudoxanthomonas sp. J31	935851	PRJNA202353	202353	Proteobacteria	Gammaproteobacteria	3.36228	71.2	-	AZNZ01	23	3087	3000	12/17/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02597179	GCA_000510725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/510/725/GCA_000510725.1_ASM51072v1	-	J31
Parageobacillus caldoxylosilyticus NBRC 107762	1220594	PRJDB413	172612	Terrabacteria group	Firmicutes	3.79875	43.9	-	BAWO01	130	3872	3574	4/12/14	4/9/17	Contig	National Institute of Technology and Evaluation	SAMD00000342	GCA_000632715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/715/GCA_000632715.1_ASM63271v1	-	NBRC 107762
Halorubrum sp. T3	1194088	PRJNA170959	170959	Euryarchaeota	Halobacteria	3.16801	68.5	-	ALWQ01	10	3073	2960	9/10/12	4/10/17	Scaffold	"Kunming Institute of Botany, Chinese Academy of Sciences"	SAMN02470121	GCA_000296615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/615/GCA_000296615.1_ASM29661v1	23144373	T3
Acidovorax sp. NA2	1662456	PRJNA285679	285679	Proteobacteria	Betaproteobacteria	4.05802	64.1492	chromosome:NZ_CP021359.1/CP021359.1; plasmid pACNA2.1:NZ_CP021360.1/CP021360.1	-	2	3794	3640	5/24/17	5/26/17	Complete Genome	University of North Carolina - Chapel Hill	SAMN03755631	GCA_002157165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/165/GCA_002157165.1_ASM215716v1	-	NA2
Confluentimicrobium sp. EMB200-NS6	1609966	PRJNA274184	274184	Proteobacteria	Alphaproteobacteria	4.14743	64.122	chromosome:NZ_CP010869.1/CP010869.1; plasmid pNS6001:NZ_CP010870.1/CP010870.1; plasmid pNS6002:NZ_CP010871.1/CP010871.1; plasmid pNS6003:NZ_CP010872.1/CP010872.1	-	4	4059	3937	10/2/15	4/11/17	Complete Genome	ChungAng University	SAMN03323603	GCA_001305615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/305/615/GCA_001305615.1_ASM130561v1	-	EMB200-NS6
Mycobacterium abscessus ATCC 19977	561007	PRJNA15691	15691	Terrabacteria group	Actinobacteria	5.09049	64.1174	chromosome Chromosome:NC_010397.1/CU458896.1; plasmid unnamed:NC_010394.1/CU458745.1	-	2	4992	4942	3/1/08	8/2/16	Complete Genome	Genoscope	SAMEA3138276	GCA_000069185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/069/185/GCA_000069185.1_ASM6918v1	19543527	-
Nocardia salmonicida NBRC 13393	1210085	PRJDB172	171041	Terrabacteria group	Actinobacteria	8.25316	67	-	BDBR01	99	7750	7417	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00018771	GCA_001613085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/085/GCA_001613085.1_ASM161308v1	-	NBRC 13393
Nocardia jejuensis NBRC 103114	1210088	PRJDB175	171042	Terrabacteria group	Actinobacteria	8.6542	67.6	-	BDBU01	89	7613	7351	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00018769	GCA_001613145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/145/GCA_001613145.1_ASM161314v1	-	NBRC 103114
Nocardia pseudovaccinii NBRC 100343	1210093	PRJDB180	171043	Terrabacteria group	Actinobacteria	9.93851	65.7	-	BDBY01	492	9232	8642	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00018770	GCA_001613225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/225/GCA_001613225.1_ASM161322v1	-	NBRC 100343
Natrialbaceae archaeon JW/NM-HA 15	1902251	PRJNA376078	376078	Euryarchaeota	Halobacteria	3.93055	64.1	chromosome:NZ_CP019893.1/CP019893.1	-	1	3785	3608	5/23/17	5/25/17	Complete Genome	Chinese Academy of Agricultural Sciences	SAMN06349942	GCA_002156705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/705/GCA_002156705.1_ASM215670v1	-	JW/NM-HA 15
Nocardia vaccinii NBRC 15922	1210098	PRJDB185	171046	Terrabacteria group	Actinobacteria	9.22404	66.7	-	BDCC01	141	8387	8041	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00040668	GCA_001613305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/305/GCA_001613305.1_ASM161330v1	-	NBRC 15922
Nocardia uniformis NBRC 13702	1210100	PRJDB187	171047	Terrabacteria group	Actinobacteria	8.76666	66	-	BDCE01	144	8047	7702	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00040667	GCA_001613345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/345/GCA_001613345.1_ASM161334v1	-	NBRC 13702
Nocardia xishanensis NBRC 101358	1210101	PRJDB188	171048	Terrabacteria group	Actinobacteria	7.69494	68.4	-	BDCF01	124	7033	6697	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00040671	GCA_001613365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/365/GCA_001613365.1_ASM161336v1	-	NBRC 101358
Nocardia africana NBRC 100379	1210061	PRJDB148	171033	Terrabacteria group	Actinobacteria	7.81098	67.9	-	BDAV01	93	7124	6890	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00018765	GCA_001612635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/635/GCA_001612635.1_ASM161263v1	-	NBRC 100379
Nocardia amamiensis NBRC 102102	1210066	PRJDB153	171034	Terrabacteria group	Actinobacteria	8.24302	67.4	-	BDBA01	487	7718	7161	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00018766	GCA_001612745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/745/GCA_001612745.1_ASM161274v1	-	NBRC 102102
Nocardia beijingensis NBRC 16342	1210068	PRJDB155	171035	Terrabacteria group	Actinobacteria	7.47784	68.9	-	BDBC01	113	6838	6565	4/1/16	4/18/17	Contig	National Institute of Technology and Evaluation	SAMD00040646	GCA_001612785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/785/GCA_001612785.1_ASM161278v1	-	NBRC 16342
Nocardia cummidelens NBRC 100378	1210073	PRJDB160	171037	Terrabacteria group	Actinobacteria	7.50065	67.1	-	BDBG01	60	6932	6727	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00040649	GCA_001612865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/865/GCA_001612865.1_ASM161286v1	-	NBRC 100378
Nocardia kruczakiae NBRC 101016	1210078	PRJDB165	171039	Terrabacteria group	Actinobacteria	7.32438	68	-	BDBL01	103	6678	6439	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00040657	GCA_001612965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/965/GCA_001612965.1_ASM161296v1	-	NBRC 101016
Rhodococcus sp. WMMA185	679318	PRJNA338664	338664	Terrabacteria group	Actinobacteria	4.44445	64.1	chromosome:NZ_CP017014.1/CP017014.1	-	1	4014	3885	10/18/16	4/17/17	Complete Genome	University of Wisconsin-Madison	SAMN05560454	GCA_001767395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/395/GCA_001767395.1_ASM176739v1	-	WMMA185
Acidocella sp. MX-AZ02	1214225	PRJNA171232	171232	Proteobacteria	Alphaproteobacteria	3.62486	64	-	AMPS01	84	3513	3241	10/17/12	4/17/17	Scaffold	Center for Genomic Sciences	SAMN02469423	GCA_000306035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/035/GCA_000306035.1_ASM30603v1	23405365	MX-AZ02
Bradyrhizobium diazoefficiens USDA 110	224911	PRJNA282645	282645	Proteobacteria	Alphaproteobacteria	9.10606	64.1	chromosome:NZ_CP011360.1/CP011360.1	-	1	8785	8519	5/12/16	4/12/17	Complete Genome	University of Florida	SAMN03573437	GCA_001642675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/675/GCA_001642675.1_ASM164267v1	27148207	USDA 110
Oscillibacter sp. 1-3	1235797	PRJNA175991	175991	Terrabacteria group	Firmicutes	4.46769	58.3	-	ASTC01	12	4388	4166	5/29/13	4/8/17	Scaffold	Broad Institute	SAMN01730999	GCA_000403435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/435/GCA_000403435.2_Osci_bact_1-3_V1	-	3-Jan
Mycobacterium sp. QIA-37	1561223	PRJNA263852	263852	Terrabacteria group	Actinobacteria	4.85537	64.1	chromosome:NZ_CP010071.1/CP010071.1	-	1	4725	4618	4/6/16	4/12/17	Complete Genome	Seoul National University College of Medicine	SAMN04613683	GCA_001611855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/855/GCA_001611855.1_ASM161185v1	-	QIA-37
Holdemania sp. Marseille-P2844	1852366	PRJEB18022	354763	Terrabacteria group	Firmicutes	3.68027	50.2	-	FPLB01	17	3487	3364	11/23/16	4/16/17	Scaffold	URMITE	SAMEA4555194	GCA_900120005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/005/GCA_900120005.1_PRJEB18022	-	Marseille-P2844
Mycobacterium abscessus	36809	PRJNA315990	315990	Terrabacteria group	Actinobacteria	4.82604	64.1	chromosome:NZ_CP014950.1/CP014950.1	-	1	4769	4648	4/4/16	3/19/17	Complete Genome	University of Michigan Medical School	SAMN04572933	GCA_001606195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/195/GCA_001606195.1_ASM160619v1	27284156	FLAC003
Vibrio aerogenes CECT 7868	1216006	PRJEB17789	357220	Proteobacteria	Gammaproteobacteria	5.25026	45.7	-	FQXZ01	77	4698	4494	12/12/16	4/17/17	Contig	UVEG	SAMEA4552037	GCA_900130105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/105/GCA_900130105.1_Vibrio.aerogenes_CECT_7868_Velvet_Prokka	-	CECT 7868
Pseudoalteromonas ruthenica CP76	1216007	PRJNA171496	171496	Proteobacteria	Gammaproteobacteria	4.00809	47.6	-	AOPM01	120	3756	3579	2/4/13	4/8/17	Contig	University of Sevilla	SAMN02471938	GCA_000336495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/495/GCA_000336495.1_PseRuthe1.0	23704184	CP76
Mycobacterium abscessus	36809	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.24237	64.1	chromosome:NZ_CP014951.1/CP014951.1	-	1	5370	5200	4/4/16	3/19/17	Complete Genome	University of Michigan Medical School	SAMN04572934	GCA_001606215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/215/GCA_001606215.1_ASM160621v1	-	FLAC004
Mycobacterium abscessus	36809	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.06448	64.1	chromosome:NZ_CP014953.1/CP014953.1	-	1	5142	4979	4/4/16	3/19/17	Complete Genome	University of Michigan Medical School	SAMN04572936	GCA_001606255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/255/GCA_001606255.1_ASM160625v1	-	FLAC007
Amphibacillus jilinensis Y1	562743	PRJNA171498	171498	Terrabacteria group	Firmicutes	3.8366	37.3	-	AMWI01	30	3615	3481	10/18/12	4/17/17	Scaffold	Zhejiang University	SAMN02472174	GCA_000306965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/965/GCA_000306965.1_ASM30696v1	19965990	Y1
Mycobacterium abscessus	36809	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.1661	64.1	chromosome:NZ_CP014954.1/CP014954.1	-	1	5267	5101	4/4/16	3/19/17	Complete Genome	University of Michigan Medical School	SAMN04572937	GCA_001606275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/275/GCA_001606275.1_ASM160627v1	-	FLAC008
Mycobacterium abscessus	36809	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.07422	64.1	chromosome:NZ_CP014955.1/CP014955.1	-	1	5066	4980	4/4/16	3/19/17	Complete Genome	University of Michigan Medical School	SAMN04572938	GCA_001606295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/295/GCA_001606295.1_ASM160629v1	-	FLAC013
Mycobacterium abscessus	36809	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.21791	64.1	chromosome:NZ_CP014958.1/CP014958.1	-	1	5345	5180	4/4/16	3/19/17	Complete Genome	University of Michigan Medical School	SAMN04572941	GCA_001610615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/615/GCA_001610615.1_ASM161061v1	-	FLAC045
Xanthomonas oryzae pv. oryzicola	129394	PRJNA280380	280380	Proteobacteria	Gammaproteobacteria	4.79432	64.1	chromosome:NZ_CP011955.1/CP011955.1	-	1	4484	3694	6/30/15	4/11/17	Complete Genome	"Bogdanove Lab, Plant Pathology and Plant-Microbe Biology, Cornell University"	SAMN03612256	GCA_001042745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/745/GCA_001042745.1_ASM104274v1	-	B8-12
Pseudomonas flavescens NBRC 103044	1215099	PRJDB207	171626	Proteobacteria	Gammaproteobacteria	5.84954	63.5	-	BCZZ01	63	5361	5197	4/4/17	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046926	GCA_002091575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/575/GCA_002091575.1_ASM209157v1	-	NBRC 103044
Pseudomonas indica NBRC 103045	1215103	PRJDB211	171630	Proteobacteria	Gammaproteobacteria	5.78788	64.1	-	BDAC01	62	5221	5084	4/4/17	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046928	GCA_002091635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/635/GCA_002091635.1_ASM209163v1	-	NBRC 103045
Pseudomonas japonica NBRC 103040 = DSM 22348	1215104	PRJDB212	171631	Proteobacteria	Gammaproteobacteria	6.66313	64.2	-	BBIR01	162	5845	5709	7/10/14	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00018431	GCA_000730585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/585/GCA_000730585.1_ASM73058v1	-	NBRC 103040
Pseudomonas jinjuensis	198616	PRJEB16237	348973	Proteobacteria	Gammaproteobacteria	5.86867	66.4	-	FNIJ01	31	5253	5114	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216193	GCA_900103845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/845/GCA_900103845.1_IMG-taxon_2663762768_annotated_assembly	-	JCM 21621
Pseudomonas migulae NBRC 103157	1215109	PRJDB217	171636	Proteobacteria	Gammaproteobacteria	6.66735	59.1	-	BDAG01	101	6144	5933	4/4/17	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046932	GCA_002091715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/715/GCA_002091715.1_ASM209171v1	-	NBRC 103157
Pseudomonas nitroreducens NBRC 12694	1215112	PRJDB220	171639	Proteobacteria	Gammaproteobacteria	6.10514	65	-	BDAI01	40	5620	5490	4/4/17	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046934	GCA_002091755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/755/GCA_002091755.1_ASM209175v1	-	NBRC 12694
Xanthomonas oryzae pv. oryzicola	129394	PRJNA280380	280380	Proteobacteria	Gammaproteobacteria	4.79062	64.1	chromosome:NZ_CP011956.1/CP011956.1	-	1	4485	3693	6/30/15	4/11/17	Complete Genome	"Bogdanove Lab, Plant Pathology and Plant-Microbe Biology, Cornell University"	SAMN03612248	GCA_001042775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/775/GCA_001042775.1_ASM104277v1	-	BLS279
Xanthomonas oryzae pv. oryzicola	129394	PRJNA280380	280380	Proteobacteria	Gammaproteobacteria	4.69259	64.1	chromosome:NZ_CP011957.1/CP011957.1	-	1	4367	3594	6/30/15	4/11/17	Complete Genome	"Bogdanove Lab, Plant Pathology and Plant-Microbe Biology, Cornell University"	SAMN03612259	GCA_001042795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/795/GCA_001042795.1_ASM104279v1	-	BXOR1
Xanthomonas oryzae pv. oryzicola	129394	PRJNA280380	280380	Proteobacteria	Gammaproteobacteria	4.79653	64.1	chromosome:NZ_CP011960.1/CP011960.1	-	1	4479	3683	6/30/15	4/11/17	Complete Genome	"Bogdanove Lab, Plant Pathology and Plant-Microbe Biology, Cornell University"	SAMN03612258	GCA_001042855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/855/GCA_001042855.1_ASM104285v1	-	L8
Pseudomonas straminea	47882	PRJEB17217	351393	Proteobacteria	Gammaproteobacteria	4.9922	63.2	-	FOMO01	21	4609	4492	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216372	GCA_900112645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/645/GCA_900112645.1_IMG-taxon_2663762767_annotated_assembly	-	JCM 2783
Helicobacter heilmannii	35817	PRJEB7975	293180	Proteobacteria	delta/epsilon subdivisions	1.63899	47.7	-	CDMK01	6	1654	1525	8/17/15	4/17/17	Scaffold	UGENT	SAMEA3174163	GCA_001283065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/065/GCA_001283065.1_Hheil	-	-
Xanthomonas oryzae pv. oryzicola	129394	PRJNA280380	280380	Proteobacteria	Gammaproteobacteria	4.77995	64.1	chromosome:NZ_CP011961.1/CP011961.1	-	1	4480	3678	6/30/15	4/11/17	Complete Genome	"Bogdanove Lab, Plant Pathology and Plant-Microbe Biology, Cornell University"	SAMN03612254	GCA_001042875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/875/GCA_001042875.1_ASM104287v1	-	RS105
Xanthomonas oryzae pv. oryzicola	129394	PRJNA248159	248159	Proteobacteria	Gammaproteobacteria	4.43083	64.1	chromosome:NZ_CP007810.1/CP007810.1	-	1	4284	3562	6/8/15	3/26/17	Complete Genome	Key Laboratory of Agricultural Biodiversity for Plant Disease Management under the Ministry of Education	SAMN02793996	GCA_001021915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/915/GCA_001021915.1_ASM102191v1	-	YM15
Pseudomonas mucidolens	46679	PRJEB16499	349417	Proteobacteria	Gammaproteobacteria	5.85317	59.1	chromosome I:NZ_LT629802.1/LT629802.1	-	1	5423	5126	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216202	GCA_900106045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/045/GCA_900106045.1_IMG-taxon_2667527233_annotated_assembly	-	LMG 2223
Roseomonas sp. B5	1217720	PRJNA171724	171724	Proteobacteria	Alphaproteobacteria	4.71926	70.6	-	ALOX01	228	4308	4106	8/20/12	5/19/17	Contig	University of Malaya	SAMN02471852	GCA_000292225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/225/GCA_000292225.1_ASM29222v1	23144419	B5
Dyella sp. 333MFSha	1798240	PRJEB15843	347796	Proteobacteria	Gammaproteobacteria	4.52829	64.9	-	FNBR01	14	3966	3870	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04515659	GCA_900102405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/405/GCA_900102405.1_IMG-taxon_2639762574_annotated_assembly	-	333MFSha
Janibacter anophelis NBRC 107843	1216968	PRJDB230	171898	Terrabacteria group	Actinobacteria	3.30861	71.3	-	BCSQ01	124	3292	3112	2/10/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046481	GCA_001570945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/945/GCA_001570945.1_ASM157094v1	-	NBRC 107843
Janibacter corallicola NBRC 107790	1216969	PRJDB231	171899	Terrabacteria group	Actinobacteria	3.10858	71.4	-	BCSR01	93	3065	2919	2/10/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046480	GCA_001570965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/965/GCA_001570965.1_ASM157096v1	-	NBRC 107790
Janibacter limosus NBRC 16128	1216970	PRJDB232	171900	Terrabacteria group	Actinobacteria	3.37826	69.8	-	BCSS01	101	3312	3174	2/10/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046487	GCA_001570985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/985/GCA_001570985.1_ASM157098v1	-	NBRC 16128
Janibacter melonis	262209	PRJNA308781	308781	Terrabacteria group	Actinobacteria	3.19688	73	-	LQZG01	7	3069	2977	5/5/16	4/17/17	Scaffold	Institute of Microbial Technology	SAMN04412765	GCA_001637565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/565/GCA_001637565.1_ASM163756v1	-	CD11-4
Arthrobacter luteolus NBRC 107841	1216973	PRJDB235	171903	Terrabacteria group	Actinobacteria	3.91786	66	-	BCQM01	32	3616	3508	2/3/16	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00046503	GCA_001552075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/075/GCA_001552075.1_ASM155207v1	-	NBRC 107841
Arthrobacter woluwensis	156980	PRJEB16452	349404	Terrabacteria group	Actinobacteria	3.85968	68.1	-	FNSN01	9	3597	3458	10/22/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04489745	GCA_900105345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/345/GCA_900105345.1_IMG-taxon_2639762519_annotated_assembly	-	DSM 10495
Glutamicibacter mysorens NBRC 103060	1216975	PRJDB237	171905	Terrabacteria group	Actinobacteria	3.42746	62	-	BCQO01	15	3207	3075	2/3/16	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00046490	GCA_001552115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/115/GCA_001552115.1_ASM155211v1	-	NBRC 103060
Mycobacterium abscessus subsp. massiliense CCUG 48898 = JCM 15300	1001714	PRJDB747	227419	Terrabacteria group	Actinobacteria	4.97838	64.1	chromosome:NZ_AP014547.1/AP014547.1	-	1	4997	4857	12/9/14	4/10/17	Complete Genome	"Laboratory of Bacterial Genomics, Pathogen Genomic Center, National Institute of Infectious Diseases"	SAMD00036666	GCA_000497265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/265/GCA_000497265.2_ASM49726v2	"2,419,788,525,503,460"	JCM 15300
Xanthomonas cassavae CFBP 4642	1219375	PRJNA172046	172046	Proteobacteria	Gammaproteobacteria	5.27076	65.141	chromosome:NZ_CM002139.1/CM002139.1; plasmid unnamed1:NZ_CM002140.1/CM002140.1	ATMC01	7	4778	4219	7/25/13	4/17/17	Chromosome	French Network on Xanthomonads	SAMN02469933	GCA_000454545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/545/GCA_000454545.1_20120625	23990580	CFBP 4642
Paraburkholderia acidipaludis NBRC 101816	1218074	PRJDB247	172070	Proteobacteria	Betaproteobacteria	6.47543	65.2	-	BAXZ01	64	5861	5667	4/29/14	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00000367	GCA_000684975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/975/GCA_000684975.1_ASM68497v1	-	NBRC 101816
Paraburkholderia bannensis NBRC 103871	1218075	PRJDB248	172071	Proteobacteria	Betaproteobacteria	8.64877	64	-	BAYA01	102	7682	7442	4/29/14	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00000368	GCA_000685015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/015/GCA_000685015.1_ASM68501v1	-	NBRC 103871
Paraburkholderia ferrariae NBRC 106233	1218076	PRJDB249	172072	Proteobacteria	Betaproteobacteria	7.93864	64.8	-	BAYB01	97	7250	6953	4/29/14	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00000356	GCA_000685035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/035/GCA_000685035.1_ASM68503v1	-	NBRC 106233
Mycobacterium abscessus subsp. bolletii	319705	PRJNA263497	263497	Terrabacteria group	Actinobacteria	5.04926	64.1	chromosome:NZ_CP009613.1/CP009613.1	-	1	5057	4948	10/31/14	3/16/17	Complete Genome	BEI Resources/American Type	SAMN03102996	GCA_000770125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/125/GCA_000770125.1_ASM77012v1	-	MC1518
Paraburkholderia ginsengisoli NBRC 100965	1218078	PRJDB251	172074	Proteobacteria	Betaproteobacteria	6.54189	63.6	-	BBJF01	50	5849	5644	7/25/14	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00017340	GCA_000739735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/735/GCA_000739735.1_ASM73973v1	-	NBRC 100965
Paraburkholderia heleia NBRC 101817	1218080	PRJDB253	172076	Proteobacteria	Betaproteobacteria	8.00747	64.6	-	BBJH01	110	7292	6985	7/25/14	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00017342	GCA_000739775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/775/GCA_000739775.1_ASM73977v1	-	NBRC 101817
Paraburkholderia kururiensis subsp. thiooxydans NBRC 107107	1218081	PRJDB254	172077	Proteobacteria	Betaproteobacteria	6.79558	65.1	-	BBJI01	89	6144	5915	7/25/14	4/9/17	Contig	National Institute of Technology and Evaluation	SAMD00017343	GCA_000739795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/795/GCA_000739795.1_ASM73979v1	-	NBRC 107107
Paraburkholderia oxyphila NBRC 105797	1218083	PRJDB256	172079	Proteobacteria	Betaproteobacteria	10.6477	64.1	-	BAYD01	313	9546	9101	4/29/14	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00000363	GCA_000685075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/075/GCA_000685075.1_ASM68507v1	-	NBRC 105797
Citrobacter sedlakii NBRC 105722	1218086	PRJDB259	172082	Proteobacteria	Gammaproteobacteria	4.63147	54.7	-	BBNB01	30	4480	4276	9/26/14	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00019865	GCA_000759835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/835/GCA_000759835.1_ASM75983v1	-	NBRC 105722
Enterococcus pseudoavium NBRC 100491	1218092	PRJDB265	172088	Terrabacteria group	Firmicutes	2.73187	40.1	-	BCQF01	59	2643	2552	1/28/16	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00045731	GCA_001544295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/295/GCA_001544295.1_ASM154429v1	-	NBRC 100491
Serratia grimesii	82995	PRJNA241476	241476	Proteobacteria	Gammaproteobacteria	5.13307	52.8	-	JGVP01	120	4906	4372	7/28/14	4/17/17	Contig	Kazan (Volga region) Federal University	SAMN02690690	GCA_000734885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/734/885/GCA_000734885.1_SerGri_SPAdes	25237029	A2
Chryseobacterium indologenes	253	PRJNA295461	295461	FCB group	Bacteroidetes/Chlorobi group	4.86174	37.9	-	LJOD01	82	4549	4424	9/21/15	4/11/17	Contig	UNIVERSITY OF MALAYA	SAMN04074747	GCA_001295265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/265/GCA_001295265.1_ASM129526v1	26981402	CI_885
Mycobacterium abscessus subsp. bolletii	319705	PRJNA260406	260406	Terrabacteria group	Actinobacteria	5.06419	64.1	chromosome:NZ_CP009408.1/CP009408.1	-	1	5071	4977	9/26/14	3/16/17	Complete Genome	BEI Resources/American Type	SAMN03067427	GCA_000758405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/405/GCA_000758405.1_ASM75840v1	-	MA 1948
Empedobacter brevis NBRC 14943 = ATCC 43319	1218108	PRJNA187932	187932	FCB group	Bacteroidetes/Chlorobi group	3.79248	32.8	-	ARNT01	28	3600	3480	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440982	GCA_000382425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/425/GCA_000382425.1_ASM38242v1	-	ATCC 43319
Kluyvera cryocrescens NBRC 102467	1218112	PRJDB285	172108	Proteobacteria	Gammaproteobacteria	5.04466	53.9	-	BCTM01	101	4883	4631	2/18/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046725	GCA_001571285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/285/GCA_001571285.1_ASM157128v1	-	NBRC 102467
Mycobacterium abscessus subsp. bolletii 103	1299325	PRJNA260405	260405	Terrabacteria group	Actinobacteria	5.05139	64.1	chromosome:NZ_CP009407.1/CP009407.1	-	1	5048	4952	9/26/14	3/16/17	Complete Genome	BEI Resources/American Type	SAMN03067425	GCA_000758385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/385/GCA_000758385.1_ASM75838v1	-	103
Paraburkholderia caledonica NBRC 102488	1218115	PRJDB288	172111	Proteobacteria	Betaproteobacteria	7.28235	62	-	BAYE01	75	6610	6279	4/29/14	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00000365	GCA_000685095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/095/GCA_000685095.1_ASM68509v1	-	NBRC 102488
Rhodococcus baikonurensis JCM 18801	1293590	PRJDB796	252060	Terrabacteria group	Actinobacteria	6.81749	62.4	-	BBBO01	633	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016817	GCA_001311605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/605/GCA_001311605.1_ASM131160v1	-	JCM 18801
Rhodococcus coprophilus NBRC 100603	1219011	PRJDB290	172258	Terrabacteria group	Actinobacteria	4.5491	66.9	-	BDAM01	30	4206	4079	12/6/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046763	GCA_001895045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/045/GCA_001895045.1_ASM189504v1	-	NBRC 100603
Rhodococcus corynebacterioides NBRC 14404	1219012	PRJDB291	172259	Terrabacteria group	Actinobacteria	3.97737	70.3	-	BCWV01	14	3655	3564	12/6/16	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00046776	GCA_001894765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/765/GCA_001894765.1_ASM189476v1	-	NBRC 14404
Rhodococcus globerulus NBRC 14531	1219016	PRJDB295	172263	Terrabacteria group	Actinobacteria	6.73524	61.7	-	BCWX01	30	6231	6054	12/6/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00047211	GCA_001894805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/805/GCA_001894805.1_ASM189480v1	-	NBRC 14531
Rhodococcus koreensis JCM 10743 = NBRC 100607	1303689	PRJDB297	172265	Terrabacteria group	Actinobacteria	10.1064	67.4	-	BCWZ01	227	9388	8733	12/6/16	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00046766	GCA_001894845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/845/GCA_001894845.1_ASM189484v1	-	NBRC 100607
Xanthomonas oryzae pv. oryzicola BLS256	383407	PRJNA16740	16740	Proteobacteria	Gammaproteobacteria	4.83175	64.1	chromosome:NC_017267.2/CP003057.2	-	1	4493	3674	10/20/11	4/11/17	Complete Genome	Center for Bioinformatics and Computational Biology	SAMN02603060	GCA_000168315.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/315/GCA_000168315.3_ASM16831v3	"2,178,493,127,148,450"	BLS256
Rhodococcus maanshanensis NBRC 100610	1219019	PRJDB298	172266	Terrabacteria group	Actinobacteria	5.67371	69.2	-	BCXA01	97	5148	4974	12/6/16	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00046769	GCA_001894865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/865/GCA_001894865.1_ASM189486v1	-	NBRC 100610
Rhodococcus marinonascens NBRC 14363	1219020	PRJDB299	172267	Terrabacteria group	Actinobacteria	4.92441	64.4	-	BCXB01	156	4619	4269	12/6/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046775	GCA_001894885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/885/GCA_001894885.1_ASM189488v1	-	NBRC 14363
Rhodococcus rhodnii NBRC 100604	1219023	PRJDB302	172270	Terrabacteria group	Actinobacteria	4.45892	69.7	-	BCXD01	70	4265	4080	12/6/16	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00046764	GCA_001894925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/925/GCA_001894925.1_ASM189492v1	-	NBRC 100604
Rhodococcus triatomae BKS 15-14	1278078	PRJNA185384	185384	Terrabacteria group	Actinobacteria	5.82435	69	-	AODO01	74	5325	5200	2/25/13	5/19/17	Contig	"Institute of Microbial Technology (IMTECH), Chandigarh, India 160036"	SAMN02469993	GCA_000341795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/795/GCA_000341795.1_Whole_genome_assembly	23538907	BKS 15-14
Rhodococcus tukisamuensis NBRC 100609	1219027	PRJDB306	172274	Terrabacteria group	Actinobacteria	5.48661	69.9	-	BCXG01	66	4970	4779	12/6/16	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00046768	GCA_001894985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/985/GCA_001894985.1_ASM189498v1	-	NBRC 100609
Comamonas aquatica	225991	PRJNA262460	262460	Proteobacteria	Betaproteobacteria	3.76443	64.5	chromosome:NZ_CP016603.1/CP016603.1	-	1	3525	3195	8/5/16	4/13/17	Chromosome	Xiamen University	SAMN03083279	GCA_000935165.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/165/GCA_000935165.2_ASM93516v2	-	CJG
Comamonas terrigena NBRC 13299	1219032	PRJDB311	172279	Proteobacteria	Betaproteobacteria	4.62957	65.1	-	BCNR01	23	4160	4000	1/13/16	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00018640	GCA_001515545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/545/GCA_001515545.1_ASM151554v1	-	NBRC 13299
Novosphingobium lentum NBRC 107847	1219033	PRJDB312	172280	Proteobacteria	Alphaproteobacteria	4.40785	65.7	-	BCTW01	53	4123	4020	2/23/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046709	GCA_001590965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/590/965/GCA_001590965.1_ASM159096v1	-	NBRC 107847
Novosphingobium naphthalenivorans NBRC 102051	1219034	PRJDB313	172281	Proteobacteria	Alphaproteobacteria	5.23609	63.8	-	BCTX01	234	4998	4778	2/23/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046703	GCA_001590985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/590/985/GCA_001590985.1_ASM159098v1	-	NBRC 102051
Novosphingobium tardaugens NBRC 16725	1219035	PRJDB314	172282	Proteobacteria	Alphaproteobacteria	4.29151	61.3	-	BASZ01	54	4043	3921	9/7/13	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00041832	GCA_000466945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/945/GCA_000466945.1_ASM46694v1	-	NBRC 16725
Sphingobium abikonense NBRC 16140	1219036	PRJDB315	172283	Proteobacteria	Alphaproteobacteria	3.74928	63.5	-	BCYT01	50	3616	3509	3/11/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046760	GCA_001598335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/335/GCA_001598335.1_ASM159833v1	-	NBRC 16140
Sphingomonas adhaesiva NBRC 15099	1219038	PRJDB317	172285	Proteobacteria	Alphaproteobacteria	4.02041	68.6	-	BCWT01	573	4029	3534	3/4/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046922	GCA_001592345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/345/GCA_001592345.1_ASM159234v1	-	NBRC 15099
Sphingomonas asaccharolytica NBRC 15499	1219040	PRJDB319	172287	Proteobacteria	Alphaproteobacteria	4.6088	64.6	-	BCYU01	191	4409	4237	3/11/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046753	GCA_001598355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/355/GCA_001598355.1_ASM159835v1	-	NBRC 15499
Sphingomonas azotifigens NBRC 15497	1219041	PRJDB320	172288	Proteobacteria	Alphaproteobacteria	5.14574	67.3	-	BCTR01	163	4665	4508	4/4/17	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046751	GCA_002091475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/475/GCA_002091475.1_ASM209147v1	-	NBRC 15497
Novosphingobium capsulatum NBRC 12533	1219042	PRJDB321	172289	Proteobacteria	Alphaproteobacteria	4.83645	65.7	-	BCYV01	70	4342	4215	3/11/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046742	GCA_001598375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/375/GCA_001598375.1_ASM159837v1	-	NBRC 12533
Sphingomonas changbaiensis NBRC 104936	1219043	PRJDB322	172290	Proteobacteria	Alphaproteobacteria	3.21738	66.3	-	BBWU01	53	3146	3059	4/7/15	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00018692	GCA_000974765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/765/GCA_000974765.1_ASM97476v1	-	NBRC 104936
Bradyrhizobium diazoefficiens USDA 110	224911	PRJNA17	17	Proteobacteria	Alphaproteobacteria	9.10583	64.1	chromosome:NC_004463.1/BA000040.2	-	1	8373	8317	12/27/02	7/27/17	Complete Genome	Kazusa	SAMD00061083	GCA_000011365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/365/GCA_000011365.1_ASM1136v1	"111,579,541,259,727,000,000,000"	USDA110
Rhodococcus yunnanensis NBRC 103083	1219029	PRJDB308	172276	Terrabacteria group	Actinobacteria	6.37393	63.9	-	BCXH01	68	5826	5650	12/6/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046770	GCA_001895005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/005/GCA_001895005.1_ASM189500v1	-	NBRC 103083
Rhodococcus zopfii NBRC 100606 = JCM 9919	1219030	PRJDB309	172277	Terrabacteria group	Actinobacteria	6.29721	68.2	-	BCXI01	146	5848	5575	12/6/16	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00046765	GCA_001895025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/025/GCA_001895025.1_ASM189502v1	-	NBRC 100606
Acidovorax sp. T1	1858609	PRJNA388301	388301	Proteobacteria	Betaproteobacteria	4.41659	64.0903	chromosome:NZ_CP021648.1/CP021648.1; plasmid p1-T1:NZ_CP021649.1/CP021649.1; plasmid p2-T1:NZ_CP021650.1/CP021650.1; plasmid p3-T1:NZ_CP021651.1/CP021651.1	-	4	4120	3891	6/8/17	6/10/17	Complete Genome	Nanjing Agricultural University	SAMN07174971	GCA_002176815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/815/GCA_002176815.1_ASM217681v1	-	T1
Sphingomonas mali NBRC 15500	1219048	PRJDB327	172295	Proteobacteria	Alphaproteobacteria	5.22838	64.9	-	BCYX01	108	4810	4696	3/11/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046754	GCA_001598415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/415/GCA_001598415.1_ASM159841v1	-	NBRC 15500
Sphingomonas parapaucimobilis NBRC 15100	1219049	PRJDB328	172296	Proteobacteria	Alphaproteobacteria	3.99452	66.4	-	BBPI01	127	3666	3551	11/18/14	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00018690	GCA_000787715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/715/GCA_000787715.1_ASM78771v1	-	NBRC 15100
Sphingomonas paucimobilis NBRC 13935	1219050	PRJDB329	172297	Proteobacteria	Alphaproteobacteria	4.3274	65.7	-	BBJS01	84	3997	3859	8/2/14	4/10/17	Contig	National Institute of Technology and Evaluation	SAMD00018691	GCA_000739895.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/895/GCA_000739895.2_ASM73989v2	-	NBRC 13935
Sphingomonas pituitosa NBRC 102491	1219051	PRJDB330	172298	Proteobacteria	Alphaproteobacteria	4.74316	67.1	-	BCYY01	75	4356	4232	3/11/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046727	GCA_001598435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/435/GCA_001598435.1_ASM159843v1	-	NBRC 102491
Sphingomonas pruni NBRC 15498	1219052	PRJDB331	172300	Proteobacteria	Alphaproteobacteria	4.48234	64.8	-	BCYZ01	168	4227	4115	3/11/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046752	GCA_001598455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/455/GCA_001598455.1_ASM159845v1	-	NBRC 15498
Novosphingobium rosa NBRC 15208	1219053	PRJDB332	172301	Proteobacteria	Alphaproteobacteria	6.95276	64.5	-	BCZE01	194	6089	5867	3/11/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046712	GCA_001598555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/555/GCA_001598555.1_ASM159855v1	-	NBRC 15208
Sphingomonas sanguinis	33051	PRJNA278217	278217	Proteobacteria	Alphaproteobacteria	4.1693	66	-	LDTD01	280	3881	3653	12/22/15	4/12/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401382	GCA_001476495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/495/GCA_001476495.1_ASM147649v1	26793183	NS319
Vibrio sagamiensis NBRC 104589	1219064	PRJDB730	203007	Proteobacteria	Gammaproteobacteria	4.55758	40.7	-	BAOJ01	504	3954	3810	5/14/13	4/17/17	Contig	University of Miyazaki	SAMD00036663	GCA_000400425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/425/GCA_000400425.1_ASM40042v1	23710045	NBRC 104589
Vibrio proteolyticus NBRC 13287	1219065	PRJDB344	172313	Proteobacteria	Gammaproteobacteria	4.74554	50	-	BATJ01	50	4447	4329	9/12/13	4/9/17	Contig	National Institute of Technology and Evaluation	SAMD00041816	GCA_000467125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/125/GCA_000467125.1_ASM46712v1	-	NBRC 13287
Xanthomonas vesicatoria ATCC 35937	925775	PRJNA344031	344031	Proteobacteria	Gammaproteobacteria	5.3499	64.0899	chromosome:NZ_CP018725.1/CP018725.1; plasmid pLMG911.1:NZ_CP018726.1/CP018726.1; plasmid pLMG911.2:NZ_CP018727.1/CP018727.1	-	3	4714	4422	12/19/16	4/6/17	Complete Genome	cirad	SAMN05823154	GCA_001908725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/725/GCA_001908725.1_ASM190872v1	-	LMG911
Sphingomonas soli NBRC 100801	1219055	PRJDB334	172303	Proteobacteria	Alphaproteobacteria	3.5141	65.1	-	BCTZ01	35	3432	3341	2/23/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046719	GCA_001591025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/025/GCA_001591025.1_ASM159102v1	-	NBRC 100801
Novosphingobium subterraneum	48936	PRJNA263865	263865	Proteobacteria	Alphaproteobacteria	4.88594	63.2	-	JRVC01	54	4657	4507	12/29/14	4/10/17	Contig	Monash University Malaysia	SAMN03107816	GCA_000807925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/925/GCA_000807925.1_Nsubt_v1	-	DSM 12447
Natrinema sp. J7-2	406552	PRJNA89473	89473	Euryarchaeota	Halobacteria	3.79361	64.0583	chromosome:NC_018224.1/CP003412.1; plasmid pJ7-1:NC_018225.1/CP003413.1	-	2	3768	3595	7/25/12	4/17/17	Complete Genome	Nankai University	SAMN02603638	GCA_000281695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/695/GCA_000281695.1_ASM28169v1	22911826	J7-2
Ruegeria pomeroyi DSS-3	246200	PRJNA281	281	Proteobacteria	Alphaproteobacteria	4.60105	64.0504	chromosome:NC_003911.12/CP000031.2; plasmid megaplasmid:NC_006569.1/CP000032.1	-	2	4422	4306	5/16/02	4/17/17	Complete Genome	TIGR	SAMN02604003	GCA_000011965.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/965/GCA_000011965.2_ASM1196v2	"156,025,641,752,679,000,000,000"	DSS-3
Vibrio nereis	693	PRJNA291738	291738	Proteobacteria	Gammaproteobacteria	4.09663	45.4	-	LHPJ01	80	3833	3716	8/26/15	4/11/17	Contig	Technical University of Denmark	SAMN03952449	GCA_001274805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/274/805/GCA_001274805.1_ASM127480v1	-	DSM 19584
Vibrio halioticoli NBRC 102217	1219072	PRJDB351	172320	Proteobacteria	Gammaproteobacteria	4.01393	42.8	-	BAUJ01	109	3580	3434	11/1/13	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00041794	GCA_000496695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/695/GCA_000496695.1_ASM49669v1	-	NBRC 102217
Arthrobacter sp. YC-RL1	1652545	PRJNA302833	302833	Terrabacteria group	Actinobacteria	4.01864	64.039	chromosome:NZ_CP013297.1/CP013297.1; plasmid unnamed 1:NZ_CP013298.1/CP013298.1; plasmid unnamed 2:NZ_CP013299.1/CP013299.1	-	3	3754	3606	12/1/15	4/11/17	Complete Genome	Chinese Academy of Agricultural Scineces	SAMN04281197	GCA_001454985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/985/GCA_001454985.1_ASM145498v1	-	YC-RL1
Vibrio mediterranei NBRC 15635	1219069	PRJDB348	172317	Proteobacteria	Gammaproteobacteria	5.62943	44	-	BCUE01	67	5186	5031	2/23/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046756	GCA_001591125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/125/GCA_001591125.1_ASM159112v1	-	NBRC 15635
Vibrio azureus NBRC 104587	1219077	PRJDB722	202999	Proteobacteria	Gammaproteobacteria	4.76866	42.3	-	BAOB01	783	4216	3981	5/14/13	4/8/17	Contig	University of Miyazaki	SAMD00036655	GCA_000400265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/265/GCA_000400265.1_ASM40026v1	23710045	NBRC 104587
Thauera butanivorans NBRC 103042	1219356	PRJDB364	172425	Proteobacteria	Betaproteobacteria	4.80654	66.1	-	BCUG01	156	4614	4368	2/23/16	6/20/17	Contig	National Institute of Technology and Evaluation	SAMD00046735	GCA_001591165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/165/GCA_001591165.1_ASM159116v1	-	NBRC 103042
Mycobacterium stephanolepidis	1520670	PRJDB5828	391182	Terrabacteria group	Actinobacteria	4.99449	64	chromosome:AP018165.1	-	1	5043	4981	6/17/17	8/5/17	Complete Genome	National Institute of Infectious Diseases	SAMD00081530	GCA_002356335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/335/GCA_002356335.1_ASM235633v1	-	NJB0901
Erwinia persicina NBRC 102418	1219360	PRJDB368	172429	Proteobacteria	Gammaproteobacteria	4.90577	55.4	-	BCTN01	66	4596	4470	2/18/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046721	GCA_001571305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/305/GCA_001571305.1_ASM157130v1	-	NBRC 102418
Millisia brevis NBRC 105863	1219361	PRJDB369	172430	Terrabacteria group	Actinobacteria	5.64634	69.2	-	BCRN01	53	4972	4810	2/6/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046497	GCA_001552615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/615/GCA_001552615.1_ASM155261v1	-	NBRC 105863
Williamsia muralis NBRC 105860	1219362	PRJDB370	172431	Terrabacteria group	Actinobacteria	5.53817	64.7	-	BDAP01	22	5151	5024	3/12/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046772	GCA_001598915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/915/GCA_001598915.1_ASM159891v1	-	NBRC 105860
Actinomadura chibensis NBRC 106107	1220554	PRJDB372	172571	Terrabacteria group	Actinobacteria	9.40889	72.8	-	BCQP01	133	8416	8097	2/3/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046498	GCA_001552135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/135/GCA_001552135.1_ASM155213v1	-	NBRC 106107
Paenibacillus alginolyticus DSM 5050 = NBRC 15375	1122915	PRJNA185611	185611	Terrabacteria group	Firmicutes	8.3293	44.8	-	AUGY01	214	7904	7331	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441166	GCA_000422905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/905/GCA_000422905.1_ASM42290v1	-	DSM 5050
Actinomadura formosensis NBRC 14204	1220557	PRJDB375	172574	Terrabacteria group	Actinobacteria	7.07973	71.6	-	BCQQ01	339	6609	6198	2/3/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046511	GCA_001552155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/155/GCA_001552155.1_ASM155215v1	-	NBRC 14204
Paenibacillus chitinolyticus NBRC 15660	1220558	PRJDB376	172575	Terrabacteria group	Firmicutes	6.43224	52.4	-	BBJT01	32	5879	5637	8/2/14	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00000362	GCA_000739915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/915/GCA_000739915.1_ASM73991v1	-	NBRC 15660
Actinomadura hibisca NBRC 15177	1220559	PRJDB377	172576	Terrabacteria group	Actinobacteria	9.02397	72.4	-	BCRO01	173	8466	8178	2/6/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046515	GCA_001552635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/635/GCA_001552635.1_ASM155263v1	-	NBRC 15177
Paenibacillus chondroitinus	59842	PRJNA247541	247541	Terrabacteria group	Firmicutes	8.69659	44.4	-	JUGY01	101	8013	7574	12/9/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02787068	GCA_000799595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/595/GCA_000799595.1_ASM79959v1	-	OK414
Actinomadura kijaniata NBRC 14229	1220561	PRJDB379	172578	Terrabacteria group	Actinobacteria	10.2589	73.2	-	BCQR01	361	9819	9268	2/3/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046512	GCA_001552175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/175/GCA_001552175.1_ASM155217v1	-	NBRC 14229
Paenibacillus ehimensis A2	1444314	PRJNA233560	233560	Terrabacteria group	Firmicutes	7.65025	54.2	-	JFHX01	180	6968	6665	4/2/14	4/17/17	Contig	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN02592617	GCA_000612225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/225/GCA_000612225.1_PaeEhi1.0	26819653	A2
Actinomadura latina NBRC 106108	1220563	PRJDB381	172580	Terrabacteria group	Actinobacteria	7.86765	72	-	BCQS01	76	7261	6972	2/3/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046499	GCA_001552195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/195/GCA_001552195.1_ASM155219v1	-	NBRC 106108
Actinomadura macra NBRC 14102	1220564	PRJDB382	172581	Terrabacteria group	Actinobacteria	9.04635	70.7	-	BCQT01	56	8020	7731	2/3/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046507	GCA_001552215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/215/GCA_001552215.1_ASM155221v1	-	NBRC 14102
Actinomadura rubrobrunea NBRC 15275	1220567	PRJDB385	172584	Terrabacteria group	Actinobacteria	6.72417	72.8	-	BCQU01	228	5875	5526	2/3/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046516	GCA_001552235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/235/GCA_001552235.1_ASM155223v1	-	NBRC 15275
Actinomadura madurae	1993	PRJEB17130	351318	Terrabacteria group	Actinobacteria	10.2551	72.1	-	FOVH01	55	9414	9026	10/31/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04489713	GCA_900115095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/095/GCA_900115095.1_IMG-taxon_2634166331_annotated_assembly	-	DSM 43067
Vibrio ezurae NBRC 102218	1219080	PRJDB359	172328	Proteobacteria	Gammaproteobacteria	3.6829	43.3	-	BATM01	67	3271	3140	9/12/13	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00041795	GCA_000467185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/185/GCA_000467185.1_ASM46718v1	-	NBRC 102218
Bradyrhizobium diazoefficiens	1355477	PRJNA298974	298974	Proteobacteria	Alphaproteobacteria	9.13654	64	chromosome:NZ_CP013127.1/CP013127.1	-	1	8757	8302	12/19/16	4/16/17	Complete Genome	Tohoku University	SAMN04191488	GCA_001908315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/315/GCA_001908315.1_ASM190831v1	-	USDA 122
Mycobacterium abscessus	36809	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.33113	64	chromosome:NZ_CP016193.1/CP016193.1	-	1	5461	5253	6/28/16	3/20/17	Complete Genome	University of Michigan Medical School	SAMN05244442	GCA_001677215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/215/GCA_001677215.1_ASM167721v1	-	FLAC055
Mycobacterium abscessus	36809	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.33095	64	chromosome:NZ_CP014961.1/CP014961.1	-	1	5460	5252	4/4/16	3/19/17	Complete Genome	University of Michigan Medical School	SAMN04572944	GCA_001610675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/675/GCA_001610675.1_ASM161067v1	-	FLAC054
Alicyclobacillus kakegawensis NBRC 103104	1220571	PRJDB390	172589	Terrabacteria group	Firmicutes	3.42158	59.1	-	BCRP01	71	3290	3169	2/6/16	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00045739	GCA_001552655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/655/GCA_001552655.1_ASM155265v1	-	NBRC 103104
Alicyclobacillus sendaiensis NBRC 100866	1220572	PRJDB391	172590	Terrabacteria group	Firmicutes	2.79385	62.7	-	BCRQ01	153	2763	2606	2/6/16	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00045735	GCA_001552675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/675/GCA_001552675.1_ASM155267v1	-	NBRC 100866
Alicyclobacillus shizuokensis NBRC 103103	1220573	PRJDB392	172591	Terrabacteria group	Firmicutes	3.62893	58.8	-	BCQV01	148	3554	3394	2/3/16	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00046314	GCA_001552255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/255/GCA_001552255.1_ASM155225v1	-	NBRC 103103
Gordonia amicalis NBRC 100051 = JCM 11271	1220574	PRJDB393	172592	Terrabacteria group	Actinobacteria	4.91547	67.4	-	BANS01	94	4501	4173	12/28/12	5/18/17	Contig	National Institute of Technology and Evaluation	SAMD00041764	GCA_000332995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/995/GCA_000332995.1_ASM33299v1	-	NBRC 100051
Sphingopyxis sp. 113P3	292913	PRJNA260765	260765	Proteobacteria	Alphaproteobacteria	4.66421	64	chromosome:NZ_CP009452.1/CP009452.1; plasmid unnamed:NZ_CP009453.1/CP009453.1	-	2	4522	4349	9/2/15	4/16/17	Complete Genome	Tohoku university	SAMN03031198	GCA_001278035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/035/GCA_001278035.1_ASM127803v1	26472829	113P3
Flavihumibacter petaseus NBRC 106054	1220578	PRJDB397	172596	FCB group	Bacteroidetes/Chlorobi group	5.69352	49.3	-	BBWV01	23	4887	4810	4/7/15	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00018683	GCA_000974785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/785/GCA_000974785.1_ASM97478v1	-	NBRC 106054
Granulicoccus phenolivorans DSM 17626	1121933	PRJNA185623	185623	Terrabacteria group	Actinobacteria	4.11772	69	-	AUHH01	74	3802	3662	7/10/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440835	GCA_000423085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/085/GCA_000423085.1_ASM42308v1	-	DSM 17626
Sphingobacterium faecium PCAi_F2.5	1255690	PRJEB19179	374436	FCB group	Bacteroidetes/Chlorobi group	8.04399	37	-	FUKX01	62	7381	7300	2/11/17	2/11/17	Contig	MICALIS	SAMEA81163918	GCA_900163855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/855/GCA_900163855.1_Sphingobacterium_faecium_PCAiF2.5	-	PCAi_F2.5
Sphingobacterium mizutaii	1010	PRJEB16128	348583	FCB group	Bacteroidetes/Chlorobi group	4.62935	39.7	-	FNGK01	24	4032	3921	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192578	GCA_900102835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/835/GCA_900102835.1_IMG-taxon_2634166301_annotated_assembly	-	DSM 11724
Rhizobium rubi NBRC 13261	1220582	PRJDB401	172600	Proteobacteria	Alphaproteobacteria	5.29338	57.3	-	BBJU01	56	5042	4872	8/2/14	4/9/17	Contig	National Institute of Technology and Evaluation	SAMD00016892	GCA_000739935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/935/GCA_000739935.1_ASM73993v1	-	NBRC 13261
Gordonia aichiensis NBRC 108223	1220583	PRJDB402	172601	Terrabacteria group	Actinobacteria	5.09203	65.3	-	BANR01	78	4627	4432	12/28/12	5/18/17	Contig	National Institute of Technology and Evaluation	SAMD00041806	GCA_000332975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/975/GCA_000332975.1_ASM33297v1	-	NBRC 108223
Herbiconiux solani NBRC 106740	1220584	PRJDB403	172602	Terrabacteria group	Actinobacteria	3.84977	70.2	-	BCST01	18	3639	3530	2/10/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046479	GCA_001571005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/005/GCA_001571005.1_ASM157100v1	-	NBRC 106740
Amphibacillus sediminis NBRC 103570	1220586	PRJDB405	172604	Terrabacteria group	Firmicutes	3.44747	38.1	-	BCQW01	74	3098	2966	2/3/16	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00046315	GCA_001552275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/275/GCA_001552275.1_ASM155227v1	-	NBRC 103570
Mycobacterium abscessus UC22	1132508	PRJNA80959	80959	Terrabacteria group	Actinobacteria	5.25714	64	chromosome:NZ_CP012044.1/CP012044.1	-	1	5315	5104	7/9/15	3/17/17	Complete Genome	Chungnam University	SAMN03839812	GCA_001050395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/395/GCA_001050395.1_ASM105039v1	-	UC22
Pseudomonas stutzeri	316	PRJNA286160	286160	Proteobacteria	Gammaproteobacteria	4.65015	64	chromosome:NZ_CP011854.1/CP011854.1	-	1	4342	4112	6/24/15	4/3/17	Complete Genome	Peking University	SAMN03765687	GCA_001038645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/645/GCA_001038645.1_ASM103864v1	-	SLG510A3-8
Geobacillus zalihae NBRC 101842	1220596	PRJDB415	172614	Terrabacteria group	Firmicutes	3.53969	51.9	-	BCPV01	164	3688	3364	1/26/16	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00045737	GCA_001544135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/135/GCA_001544135.1_ASM154413v1	-	NBRC 101842
Shewanella algae	38313	PRJEB8326	273949	Proteobacteria	Gammaproteobacteria	5.00585	52.9	-	CDQH01	11	4439	4259	1/29/15	4/10/17	Scaffold	URMITE	SAMEA3221090	GCA_000947195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/195/GCA_000947195.1_Shewanella_algae_MARS_14	-	MARS 14
Lysinibacillus odysseyi 34hs-1 = NBRC 100172	1220589	PRJNA239542	239542	Terrabacteria group	Firmicutes	4.51282	41	-	JPVP01	60	4495	4359	11/6/14	4/9/17	Contig	Huazhong Agricultural University	SAMN02953199	GCA_000773015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/015/GCA_000773015.1_ASM77301v1	-	NBRC 100172
Psychrobacter phenylpyruvicus DSM 7000 = NBRC 102152	1123034	PRJNA185653	185653	Proteobacteria	Gammaproteobacteria	3.09805	41.7	-	JMKP01	106	2651	2460	5/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743348	GCA_000685805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/805/GCA_000685805.1_ASM68580v1	-	DSM 7000
Blastococcus sp. URHD0036	1380356	PRJNA213793	213793	Terrabacteria group	Actinobacteria	5.17758	74	-	JNIK01	20	4970	4826	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841148	GCA_000701365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/365/GCA_000701365.1_ASM70136v1	-	URHD0036
Xanthomonas oryzae pv. oryzicola	129394	PRJNA237971	237971	Proteobacteria	Gammaproteobacteria	5.0801	64	chromosome:NZ_CP007221.1/CP007221.1	-	1	4811	3914	3/4/15	4/11/17	Complete Genome	Cornell University	SAMN02640212	GCA_000940825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/825/GCA_000940825.1_ASM94082v1	27148456	CFBP7342
Salinibacterium sp. PAMC 21357	1112215	PRJNA76641	76641	Terrabacteria group	Actinobacteria	3.10926	60.1	-	AHWA01	6	3024	2854	2/14/12	4/8/17	Contig	Korea Polar Research Institute	SAMN02470161	GCA_000247645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/645/GCA_000247645.2_ASM24764v2	22493208	PAMC 21357
Lactobacillus florum DSM 22689 = JCM 16035	1423745	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.34861	41.1	-	AYZI01	50	1349	1288	11/6/15	4/11/17	Contig	Shanghai Majorbio	SAMN02369447	GCA_001436645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/645/GCA_001436645.1_ASM143664v1	26415554	DSM 22689
SAR86 cluster bacterium SAR86E	1208365	PRJNA170317	170317	Proteobacteria	Gammaproteobacteria	1.3968	36.2	-	AMWX01	13	1442	1403	10/24/12	7/29/15	Contig	J. Craig Venter Institute	SAMN02436393	GCA_000307935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/935/GCA_000307935.1_ntsars86ev1.0	-	-
Dickeya paradisiaca NCPPB 2511	1224150	PRJNA172954	172954	Proteobacteria	Gammaproteobacteria	4.63187	55	chromosome:NZ_CM001857.1/CM001857.1	AONV01	1	4090	3780	4/3/13	4/8/17	Chromosome	James Hutton Institute	SAMN02470088	GCA_000400505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/505/GCA_000400505.1_DPA2511_1.0	24265502	NCPPB 2511
Pseudomonas stutzeri DSM 4166	996285	PRJNA63543	63543	Proteobacteria	Gammaproteobacteria	4.68995	64	chromosome:NC_017532.1/CP002622.1	-	1	4427	4252	4/5/11	5/19/17	Complete Genome	"Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Key Laboratory of Crop Biotechnology."	SAMN02603042	GCA_000195105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/105/GCA_000195105.1_ASM19510v1	21515765	DSM 4166
Xanthomonas vesicatoria	56460	PRJNA344031	344031	Proteobacteria	Gammaproteobacteria	5.39391	63.9952	chromosome:NZ_CP018470.1/CP018470.1; plasmid pLM159.1:NZ_CP018468.1/CP018468.1; plasmid pLM159.2:NZ_CP018471.1/CP018471.1; plasmid pLM159.3:NZ_CP018469.1/CP018469.1	-	4	4745	4430	12/19/16	4/6/17	Complete Genome	cirad	SAMN05823142	GCA_001908815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/815/GCA_001908815.1_ASM190881v1	-	LM159
Dickeya dianthicola NCPPB 453	1223568	PRJNA172901	172901	Proteobacteria	Gammaproteobacteria	4.67606	55.9526	chromosome:NZ_CM001841.1/CM001841.1	AOOB01	11	4242	3987	4/3/13	4/8/17	Chromosome	James Hutton Institute	SAMN02470095	GCA_000365305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/305/GCA_000365305.1_DDI453_v1.0	23887905	NCPPB 453
Pseudomonas chlororaphis	587753	PRJNA263136	263136	Proteobacteria	Gammaproteobacteria	6.6629	63.9808	chromosome:NZ_CP011110.1/CP011110.1; plasmid unnamed:NZ_CP011111.1/CP011111.1	-	2	6057	5887	3/27/15	4/3/17	Complete Genome	"Instituto de Hortofruticultura Subtropical y Mediterranea, IHSM-UMA-CSIC"	SAMN03097209	GCA_000963835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/835/GCA_000963835.1_ASM96383v1	25679537	PCL1606
Xanthomonas oryzae pv. oryzicola	129394	PRJNA280380	280380	Proteobacteria	Gammaproteobacteria	5.00599	63.9752	chromosome:NZ_CP011962.1/CP011962.1; plasmid unnamed:NZ_CP011963.1/CP011963.1	-	2	4709	3883	6/30/15	4/11/17	Complete Genome	"Bogdanove Lab, Plant Pathology and Plant-Microbe Biology, Cornell University"	SAMN03612252	GCA_001042735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/735/GCA_001042735.1_ASM104273v1	-	CFBP2286
Candidatus Accumulibacter phosphatis clade IIA str. UW-1	522306	PRJNA29435	29435	Proteobacteria	Betaproteobacteria	5.30613	63.9598	chromosome:NC_013194.1/CP001715.1; plasmid pAph01:NC_013193.1/CP001716.1; plasmid pAph02:NC_013190.1/CP001717.1; plasmid pAph03:NC_013191.1/CP001718.1	-	4	4741	4565	9/1/09	5/18/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598465	GCA_000024165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/165/GCA_000024165.1_ASM2416v1	-	UW-1
Nocardia shimofusensis NBRC 100134	1210087	PRJDB174	173007	Terrabacteria group	Actinobacteria	6.33168	69.1	-	BDBT01	75	5662	5464	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00040665	GCA_001613125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/125/GCA_001613125.1_ASM161312v1	-	NBRC 100134
Nocardia mexicana NBRC 108244	1210089	PRJDB176	173008	Terrabacteria group	Actinobacteria	8.95559	68.7	-	BDBV01	180	8186	7885	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00018777	GCA_001613165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/165/GCA_001613165.1_ASM161316v1	-	NBRC 108244
Nocardia puris NBRC 108233	1210090	PRJDB177	173009	Terrabacteria group	Actinobacteria	7.67729	69.8	-	BDBW01	185	7089	6665	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00040663	GCA_001613185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/185/GCA_001613185.1_ASM161318v1	-	NBRC 108233
Nocardia sienata NBRC 100364	1210092	PRJDB179	173011	Terrabacteria group	Actinobacteria	6.83633	68.2	-	BDBX01	135	6225	5981	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00040666	GCA_001613205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/205/GCA_001613205.1_ASM161320v1	-	NBRC 100364
Nocardia speluncae NBRC 108251	1210094	PRJDB181	173012	Terrabacteria group	Actinobacteria	7.39579	66.9	-	BDBZ01	61	6755	6530	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00018778	GCA_001613245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/245/GCA_001613245.1_ASM161324v1	-	NBRC 108251
Nocardia vermiculata NBRC 100427	1210096	PRJDB183	173013	Terrabacteria group	Actinobacteria	6.68798	67	-	BDCA01	80	6143	5939	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00040669	GCA_001613265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/265/GCA_001613265.1_ASM161326v1	-	NBRC 100427
Nocardia yamanashiensis NBRC 100130	1210099	PRJDB186	173014	Terrabacteria group	Actinobacteria	9.09592	68.1	-	BDCD01	80	8376	8121	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00018773	GCA_001613325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/325/GCA_001613325.1_ASM161332v1	-	NBRC 100130
Nocardia flavorosea NBRC 108225	1220553	PRJDB371	173015	Terrabacteria group	Actinobacteria	7.44017	67.1	-	BDCG01	70	6820	6527	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00040650	GCA_001613385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/385/GCA_001613385.1_ASM161338v1	-	NBRC 108225
SAR86 cluster bacterium SAR86C	1123864	PRJNA79365	79365	Proteobacteria	Gammaproteobacteria	0.733176	35.8	-	AHBI01	142	-	-	2/24/12	7/28/15	Scaffold	J. Craig Venter Institute	SAMN02436185	GCA_000252565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/565/GCA_000252565.1_SAR86C_single_cell_1.0	22170421	-
Dickeya sp. CSL RW240	1224144	PRJNA172955	172955	Proteobacteria	Gammaproteobacteria	4.38662	53.4999	chromosome:NZ_CM001973.2/CM001973.2	AONZ02	26	3959	3768	6/4/13	4/17/17	Chromosome	James Hutton Institute	SAMN02470084	GCA_000406085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/085/GCA_000406085.2_ASM40608v2	24265502	CSL RW240
Nocardia acidivorans NBRC 108247	1210062	PRJDB149	172990	Terrabacteria group	Actinobacteria	7.57189	66.9	-	BDAW01	161	7084	6733	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00040643	GCA_001625085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/625/085/GCA_001625085.1_ASM162508v1	-	NBRC 108247
Nocardia alba NBRC 108234	1210063	PRJDB150	172991	Terrabacteria group	Actinobacteria	7.28275	67.7	-	BDAX01	62	6611	6444	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00018780	GCA_001612665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/665/GCA_001612665.1_ASM161266v1	-	NBRC 108234
Nocardia altamirensis NBRC 108246	1210064	PRJDB151	172992	Terrabacteria group	Actinobacteria	9.82958	66.8	-	BDAY01	167	8769	8522	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00018774	GCA_001612685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/685/GCA_001612685.1_ASM161268v1	-	NBRC 108246
Nocardia anaemiae NBRC 100462	1210065	PRJDB152	172993	Terrabacteria group	Actinobacteria	8.61613	65.5	-	BDAZ01	134	7770	7431	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00018767	GCA_001612725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/725/GCA_001612725.1_ASM161272v1	-	NBRC 100462
Nocardia arthritidis NBRC 100137	1210067	PRJDB154	172994	Terrabacteria group	Actinobacteria	7.12419	68.5	-	BDBB01	113	6528	6203	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00040645	GCA_001612765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/765/GCA_001612765.1_ASM161276v1	-	NBRC 100137
Nocardia coubleae NBRC 108252	1210069	PRJDB156	172995	Terrabacteria group	Actinobacteria	6.61982	67.9	-	BDBD01	40	6100	5936	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00018775	GCA_001612805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/805/GCA_001612805.1_ASM161280v1	-	NBRC 108252
Nocardia caishijiensis NBRC 108228	1210070	PRJDB157	172996	Terrabacteria group	Actinobacteria	6.29479	68.2	-	BDBE01	60	5677	5505	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00040647	GCA_001612825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/825/GCA_001612825.1_ASM161282v1	-	NBRC 108228
Nocardia elegans NBRC 108235	1210071	PRJDB158	172997	Terrabacteria group	Actinobacteria	7.53915	67.9	-	BDBF01	117	6915	6651	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00018776	GCA_001612845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/845/GCA_001612845.1_ASM161284v1	-	NBRC 108235
Nocardia harenae NBRC 108248	1210074	PRJDB161	172998	Terrabacteria group	Actinobacteria	6.14429	72	-	BDBH01	25	5602	5434	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00040653	GCA_001612885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/885/GCA_001612885.1_ASM161288v1	-	NBRC 108248
Nocardia ignorata NBRC 108230	1210075	PRJDB162	172999	Terrabacteria group	Actinobacteria	7.01316	67.7	-	BDBI01	69	6586	6331	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00040654	GCA_001612905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/905/GCA_001612905.1_ASM161290v1	-	NBRC 108230
Nocardia inohanensis NBRC 100128	1210077	PRJDB164	173000	Terrabacteria group	Actinobacteria	8.11801	67.8	-	BDBK01	26	7416	7210	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00040655	GCA_001612945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/945/GCA_001612945.1_ASM161294v1	-	NBRC 100128
Nocardia gamkensis NBRC 108242	1210079	PRJDB166	173001	Terrabacteria group	Actinobacteria	7.70979	68.4	-	BDBM01	120	7075	6751	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00040651	GCA_001612985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/985/GCA_001612985.1_ASM161298v1	-	NBRC 108242
Nocardia jinanensis NBRC 108249	1210082	PRJNA298279	298279	Terrabacteria group	Actinobacteria	5.03925	67.4	-	LNDA01	107	4626	4280	12/24/15	4/11/17	Scaffold	Nanyang Technological University	SAMN04120645	GCA_001482675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/675/GCA_001482675.1_ASM148267v1	-	NBRC 108249
Nocardia lijiangensis NBRC 108240	1210083	PRJDB170	173004	Terrabacteria group	Actinobacteria	8.1598	68.5	-	BDBP01	230	7248	6804	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00040658	GCA_001613045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/045/GCA_001613045.1_ASM161304v1	-	NBRC 108240
Nocardia miyunensis NBRC 108239	1210084	PRJDB171	173005	Terrabacteria group	Actinobacteria	10.5201	67	-	BDBQ01	208	9491	8990	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00018779	GCA_001613065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/065/GCA_001613065.1_ASM161306v1	-	NBRC 108239
Nocardia pseudobrasiliensis NBRC 108224	1210086	PRJDB173	173006	Terrabacteria group	Actinobacteria	8.40298	67.3	-	BDBS01	104	7936	7659	4/1/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00040662	GCA_001613105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/105/GCA_001613105.1_ASM161310v1	-	NBRC 108224
Natrinema pellirubrum DSM 15624	797303	PRJNA52951	52951	Euryarchaeota	Halobacteria	4.3541	63.9597	chromosome:NC_019962.1/CP003372.1; plasmid pNATPE01:NC_019967.1/CP003373.1; plasmid pNATPE02:NC_019963.1/CP003374.1	-	3	4311	4096	12/27/12	5/19/17	Complete Genome	JGI	SAMN02261373	GCA_000230735.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/735/GCA_000230735.3_ASM23073v3	-	DSM 15624
Solibacillus isronensis B3W22	1224748	PRJNA173035	173035	Terrabacteria group	Firmicutes	4.01989	38.8	-	AMCK01	177	3954	3810	9/18/12	4/7/17	Contig	Centre for Cellular and Molecular Biology	SAMN02469441	GCA_000298255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/255/GCA_000298255.1_ASM29825v1	23144382	B3W22
Globicatella sanguinis NBRC 15551	1223493	PRJDB419	173138	Terrabacteria group	Firmicutes	2.32775	35.5	-	BCQX01	256	2079	1985	2/3/16	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00046317	GCA_001552295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/295/GCA_001552295.1_ASM155229v1	-	NBRC 15551
Tetragenococcus solitarius NBRC 100494	1223494	PRJDB420	173139	Terrabacteria group	Firmicutes	2.51365	36	-	BCPY01	97	2450	2338	1/26/16	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00045733	GCA_001544195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/195/GCA_001544195.1_ASM154419v1	-	NBRC 100494
Geobacillus jurassicus NBRC 107829	1223502	PRJDB428	173147	Terrabacteria group	Firmicutes	3.45424	52.2	-	BCQG01	131	3567	3234	1/28/16	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00045741	GCA_001544315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/315/GCA_001544315.1_ASM154431v1	-	NBRC 107829
Parageobacillus toebii NBRC 107807	1223503	PRJDB429	173148	Terrabacteria group	Firmicutes	3.26397	42.1	-	BDAQ01	46	3384	3103	3/12/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00045740	GCA_001598935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/935/GCA_001598935.1_ASM159893v1	-	NBRC 107807
Microbacterium resistens NBRC 103078	1223505	PRJDB431	173150	Terrabacteria group	Actinobacteria	3.98084	71.2	-	BCRA01	233	3844	3579	2/5/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046494	GCA_001552355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/355/GCA_001552355.1_ASM155235v1	-	NBRC 103078
Moraxella lacunata NBRC 102154	1223506	PRJDB432	173151	Proteobacteria	Gammaproteobacteria	2.77909	44.1	-	BCUK01	397	2686	2490	2/23/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046705	GCA_001591245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/245/GCA_001591245.1_ASM159124v1	-	NBRC 102154
Moraxella atlantae NBRC 14588	1223508	PRJDB434	173153	Proteobacteria	Gammaproteobacteria	2.37654	48	-	BCUL01	81	2167	2024	2/23/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046710	GCA_001591265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/265/GCA_001591265.1_ASM159126v1	-	NBRC 14588
Bacillus trypoxylicola	519424	PRJNA313128	313128	Terrabacteria group	Firmicutes	4.34794	35.7	-	LTAO01	40	4106	3961	3/14/16	4/12/17	Scaffold	KRIBB	SAMN04515757	GCA_001590785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/590/785/GCA_001590785.1_ASM159078v1	27174273	KCTC 13244
Cellulomonas iranensis NBRC 101100 = JCM 18110	1223509	PRJDB435	173154	Terrabacteria group	Actinobacteria	3.96707	75.3	-	BCRB01	202	3659	3430	2/5/16	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00046488	GCA_001552375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/375/GCA_001552375.1_ASM155237v1	-	NBRC 101100
Crossiella equi	130796	PRJNA369760	369760	Terrabacteria group	Actinobacteria	9.08524	72.2	-	MUMG01	694	8386	7793	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06293657	GCA_002155995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/995/GCA_002155995.1_ASM215599v1	-	NRRL B-24104
Curtobacterium ammoniigenes NBRC 101786	1223517	PRJDB442	173161	Terrabacteria group	Actinobacteria	3.0392	67.9	-	BCSV01	13	2841	2748	2/10/16	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00046471	GCA_001571045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/045/GCA_001571045.1_ASM157104v1	-	NBRC 101786
Neokomagataea thailandica NBRC 106555	1223520	PRJDB445	173164	Proteobacteria	Alphaproteobacteria	2.4913	52.4	-	BCZB01	83	2302	2156	3/11/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046741	GCA_001598495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/495/GCA_001598495.1_ASM159849v1	-	NBRC 106555
Comamonas granuli NBRC 101663	1223521	PRJDB446	173165	Proteobacteria	Betaproteobacteria	3.50599	68.5	-	BBJX01	34	3238	3146	8/2/14	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00018641	GCA_000739995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/995/GCA_000739995.1_ASM73999v1	-	NBRC 101663
Streptomyces mobaraensis NBRC 13819 = DSM 40847	1223523	PRJNA188290	188290	Terrabacteria group	Actinobacteria	7.47781	73.3	-	AORZ01	266	6511	6134	2/27/13	5/19/17	Contig	Jiangxi Normal University	SAMN02470112	GCA_000342125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/125/GCA_000342125.1_S.mobaraensisn_1.0	23558536	DSM 40847
Sanguibacter suarezii NBRC 16159	1223525	PRJDB450	173169	Terrabacteria group	Actinobacteria	3.80266	70.5	-	BCRT01	31	3392	3295	2/6/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046520	GCA_001552735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/735/GCA_001552735.1_ASM155273v1	-	NBRC 16159
Kribbia dieselivorans NBRC 106261	1223526	PRJDB451	173170	Terrabacteria group	Actinobacteria	3.2939	69.2	-	BCRE01	310	3204	2926	2/5/16	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00046500	GCA_001552435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/435/GCA_001552435.1_ASM155243v1	-	NBRC 106261
Microbacterium hydrocarbonoxydans	273678	PRJNA270387	270387	Terrabacteria group	Actinobacteria	3.95358	68.5	-	JYJB01	10	3697	3614	3/19/15	4/10/17	Contig	Austrian Institute of Technology	SAMN03266143	GCA_000956475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/475/GCA_000956475.1_ASM95647v1	25977426	SA35
Pseudonocardia asaccharolytica DSM 44247 = NBRC 16224	1123024	PRJNA185659	185659	Terrabacteria group	Actinobacteria	5.05684	71.8	-	AUII01	72	4986	4642	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441500	GCA_000423625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/625/GCA_000423625.1_ASM42362v1	-	DSM 44247
Corynebacterium minutissimum	38301	PRJNA264738	264738	Terrabacteria group	Actinobacteria	2.6634	60	-	JSEF01	38	2488	2358	12/19/14	4/10/17	Contig	Centers for Disease Control & Prevention	SAMN03140311	GCA_000805675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/675/GCA_000805675.1_ASM80567v1	-	ATCC 23348
Microbacterium oleivorans NBRC 103075	1223528	PRJDB453	173172	Terrabacteria group	Actinobacteria	2.976	69	-	BCRG01	20	2889	2805	2/5/16	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00046492	GCA_001552475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/475/GCA_001552475.1_ASM155247v1	-	NBRC 103075
Microbacterium paraoxydans	199592	PRJEB16451	349405	Terrabacteria group	Actinobacteria	3.55231	70	chromosome I:NZ_LT629770.1/LT629770.1	-	1	3454	3361	10/21/16	4/13/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489809	GCA_900105335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/335/GCA_900105335.1_IMG-taxon_2634166897_annotated_assembly	-	DSM 15019
Corynebacterium xerosis NBRC 16721	1223513	PRJDB439	173158	Terrabacteria group	Actinobacteria	2.68622	69.7	-	BCRD01	14	2384	2281	2/5/16	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00046521	GCA_001552415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/415/GCA_001552415.1_ASM155241v1	-	NBRC 16721
Sphingobium cloacae NBRC 102517	1223531	PRJDB456	173175	Proteobacteria	Alphaproteobacteria	4.29062	64.6	-	BCUM01	169	4264	4035	2/23/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046706	GCA_001591285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/285/GCA_001591285.1_ASM159128v1	-	NBRC 102517
Lactobacillus nodensis DSM 19682 = JCM 14932 = NBRC 107160	1423775	PRJDB652	243234	Terrabacteria group	Firmicutes	2.67854	37.6	-	BAMN01	52	2704	2391	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00015930	GCA_000615905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/905/GCA_000615905.1_ASM61590v1	-	JCM 14932
Sphingobium amiense NBRC 102518	1223534	PRJDB459	173178	Proteobacteria	Alphaproteobacteria	4.54376	64.7	-	BCUN01	130	4393	4222	2/23/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046707	GCA_001591305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/305/GCA_001591305.1_ASM159130v1	-	NBRC 102518
Smaragdicoccus niigatensis DSM 44881 = NBRC 103563	1123258	PRJNA182439	182439	Terrabacteria group	Actinobacteria	5.32047	64.3	-	AQXZ01	19	5141	5022	4/23/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441385	GCA_000380645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/645/GCA_000380645.1_ASM38064v1	-	DSM 44881
Skermania piniformis NBRC 15059	1223536	PRJDB461	173180	Terrabacteria group	Actinobacteria	4.20773	68.6	-	BCRV01	44	3896	3751	2/6/16	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00046514	GCA_001552855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/855/GCA_001552855.1_ASM155285v1	-	NBRC 15059
Lactobacillus senmaizukei DSM 21775 = NBRC 103853	1423803	PRJDB462	173181	Terrabacteria group	Firmicutes	2.20966	48.7	-	BCWD01	74	2138	2058	2/27/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046913	GCA_001592085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/085/GCA_001592085.1_ASM159208v1	-	NBRC 103853
Mycobacterium chlorophenolicum	37916	PRJNA274376	274376	Terrabacteria group	Actinobacteria	7.37952	68.4	-	JYNL01	72	7104	6725	7/1/15	4/10/17	Scaffold	Uppsala University	SAMN03327461	GCA_001044235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/235/GCA_001044235.1_ASM104423v1	26079817	DSM 43826
Nocardia mikamii NBRC 108933	1223548	PRJDB474	173193	Terrabacteria group	Actinobacteria	7.56281	68	-	BDCM01	42	6772	6577	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00040659	GCA_001613505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/505/GCA_001613505.1_ASM161350v1	-	NBRC 108933
Nocardia fusca NBRC 14340	1223549	PRJDB475	173194	Terrabacteria group	Actinobacteria	8.03672	68.1	-	BDCU01	105	7267	6972	4/6/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00049478	GCA_001618425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/425/GCA_001618425.1_ASM161842v1	-	NBRC 14340
Nocardia violaceofusca NBRC 14427	1223550	PRJDB476	173195	Terrabacteria group	Actinobacteria	7.50582	68	-	BDCN01	77	6814	6584	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00018772	GCA_001613525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/525/GCA_001613525.1_ASM161352v1	-	NBRC 14427
Cecembia lonarensis LW9	1225176	PRJNA173134	173134	FCB group	Bacteroidetes/Chlorobi group	4.84284	41	-	AMGM01	358	4248	4035	9/18/12	5/18/17	Contig	Centre for Cellular and Molecular Biology	SAMN02469435	GCA_000298295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/295/GCA_000298295.1_ASM29829v1	23144386	LW9
Bartonella queenslandensis AUST/NH15	1221525	PRJEB364	173348	Proteobacteria	Alphaproteobacteria	2.37786	38.9	-	CALX01	598	1977	1563	8/23/12	4/17/17	Scaffold	URMITE	SAMEA2272465	GCA_000312585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/585/GCA_000312585.1_ASM31258v1	-	AUST/NH15
Halorubrum lacusprofundi ATCC 49239	416348	PRJNA18455	18455	Euryarchaeota	Halobacteria	3.69258	63.9543	chromosome 1:NC_012029.1/CP001365.1; chromosome 2:NC_012028.1/CP001366.1; plasmid pHLAC01:NC_012030.1/CP001367.1	-	3	3656	3456	2/4/09	3/22/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598407	GCA_000022205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/205/GCA_000022205.1_ASM2220v1	-	ATCC 49239
Gordonia desulfuricans NBRC 100010	1223540	PRJDB465	173184	Terrabacteria group	Actinobacteria	5.42863	68.1	-	BCNF01	246	4822	4608	12/22/15	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00018679	GCA_001485495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/495/GCA_001485495.1_ASM148549v1	-	NBRC 100010
Gordonia hydrophobica NBRC 16057	1223541	PRJDB466	173185	Terrabacteria group	Actinobacteria	4.57944	67.5	-	BCWU01	45	4241	4097	3/4/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00047212	GCA_001592365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/365/GCA_001592365.1_ASM159236v1	-	NBRC 16057
Gordonia malaquae NBRC 108250	1223542	PRJDB467	173186	Terrabacteria group	Actinobacteria	4.46546	66.4	-	BAOP01	115	4279	4137	2/20/13	5/18/17	Contig	National Institute of Technology and Evaluation	SAMD00041811	GCA_000344135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/135/GCA_000344135.1_ASM34413v1	-	NBRC 108250
Gordonia soli NBRC 108243	1223545	PRJDB470	173189	Terrabacteria group	Actinobacteria	5.37582	67.7	-	BANX01	60	4948	4801	1/16/13	5/18/17	Contig	National Institute of Technology and Evaluation	SAMD00041810	GCA_000334455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/455/GCA_000334455.1_ASM33445v1	-	NBRC 108243
Nocardia grenadensis NBRC 108939	1223546	PRJDB471	173190	Terrabacteria group	Actinobacteria	6.52012	68.2	-	BDCJ01	71	5995	5712	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00040652	GCA_001613445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/445/GCA_001613445.1_ASM161344v1	-	NBRC 108939
Nocardia niwae NBRC 108934 = DSM 45340	1223489	PRJDB472	173191	Terrabacteria group	Actinobacteria	7.30536	68.8	-	BDCK01	105	6670	6408	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00040660	GCA_001613465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/465/GCA_001613465.1_ASM161346v1	-	NBRC 108934
Nocardia rhamnosiphila NBRC 108938	1223547	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.66372	68.5	-	JOAJ01	93	6875	6660	7/2/14	4/9/17	Contig	University of Illinois	SAMN02645364	GCA_000720425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/425/GCA_000720425.1_ASM72042v1	-	NRRL B-24637
Synechococcus sp. SynAce01	1916956	PRJNA352894	352894	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.75063	63.9	chromosome:NZ_CP018091.1/CP018091.1	-	1	2849	2715	11/22/16	4/16/17	Complete Genome	Peking University Shenzhen Graduate School	SAMN06006676	GCA_001885215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/215/GCA_001885215.1_ASM188521v1	-	SynAce01
Mycobacterium monacense DSM 44395	1226751	PRJNA354248	354248	Terrabacteria group	Actinobacteria	6.00171	68.4	-	MVIA01	106	5795	5607	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064249	GCA_002086655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/655/GCA_002086655.1_ASM208665v1	-	DSM 44395
Mycobacterium mucogenicum	56689	PRJEB10728	295382	Terrabacteria group	Actinobacteria	6.21013	67.2	-	CYSI01	7	6022	5855	9/11/15	4/11/17	Contig	URMITE	SAMEA3535282	GCA_001291445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/445/GCA_001291445.1_Mycobacterium_mucogenicum	-	CSUR P2099
Gordonia paraffinivorans NBRC 108238	1223543	PRJDB468	173187	Terrabacteria group	Actinobacteria	4.63233	68.9	-	BAOQ01	111	4211	3984	2/20/13	5/18/17	Contig	National Institute of Technology and Evaluation	SAMD00041809	GCA_000344155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/155/GCA_000344155.1_ASM34415v1	-	NBRC 108238
Gordonia sihwensis NBRC 108236	1223544	PRJDB469	173188	Terrabacteria group	Actinobacteria	4.14089	68.1	-	BANU01	64	3899	3754	12/28/12	5/18/17	Contig	National Institute of Technology and Evaluation	SAMD00041808	GCA_000333035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/035/GCA_000333035.1_ASM33303v1	-	NBRC 108236
Viridibacillus arenosi FSL R5-213	1227360	PRJNA173848	173848	Terrabacteria group	Firmicutes	4.44502	35.3	-	ASQA01	47	4357	4240	1/13/14	4/9/17	Contig	Cornell University	SAMN02597355	GCA_000518005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/005/GCA_000518005.1_ASM51800v1	24422886	FSL R5-213
Chryseobacterium taeanense	311334	PRJEB15951	348228	FCB group	Bacteroidetes/Chlorobi group	3.93535	36	-	FNDW01	30	3494	3390	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421846	GCA_900099685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/685/GCA_900099685.1_IMG-taxon_2675903150_annotated_assembly	-	DSM 17071
Lactobacillus saerimneri DSM 16049	1122153	PRJNA185633	185633	Terrabacteria group	Firmicutes	1.72075	42.5	-	AUHQ01	47	1766	1626	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440837	GCA_000423265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/265/GCA_000423265.1_ASM42326v1	-	DSM 16049
Sphaerimonospora mesophila NBRC 14179 = JCM 3151	1226285	PRJDB952	245267	Terrabacteria group	Actinobacteria	4.82303	67.8	-	BBGI01	3362	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016949	GCA_001313685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/685/GCA_001313685.1_ASM131368v1	-	JCM 3151
Actinobaculum sp. oral taxon 183 str. F0552	1227261	PRJNA173932	173932	Terrabacteria group	Actinobacteria	2.36601	67.6	-	AWSB01	73	2007	1862	9/10/13	4/17/17	Scaffold	Washington University	SAMN02436889	GCA_000466165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/165/GCA_000466165.1_ASM46616v1	-	F0552
Actinomyces johnsonii F0542	1321818	PRJNA198882	198882	Terrabacteria group	Actinobacteria	3.32771	67.4	-	AWSE01	266	2909	2605	9/10/13	4/9/17	Scaffold	Washington University	SAMN02436817	GCA_000466245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/245/GCA_000466245.1_ASM46624v1	-	F0542
Mycobacterium chelonae CCUG 47445	1460372	PRJNA237578	237578	Terrabacteria group	Actinobacteria	5.02982	63.9	chromosome:NZ_CP007220.1/CP007220.1	-	1	4921	4804	4/27/16	4/5/17	Complete Genome	University of Balearic Islands	SAMN02630629	GCA_001632805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/805/GCA_001632805.1_ASM163280v1	27284158	CCUG 47445
Actinobacillus capsulatus DSM 19761	1120931	PRJNA174169	174169	Proteobacteria	Gammaproteobacteria	2.62114	40	-	ARFN01	46	2561	2354	4/19/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441362	GCA_000374285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/285/GCA_000374285.1_ASM37428v1	-	DSM 19761
Actinomadura flavalba DSM 45200	561175	PRJNA174170	174170	Terrabacteria group	Actinobacteria	6.16778	73.3	-	ARFO01	22	5679	5533	4/19/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441028	GCA_000374305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/305/GCA_000374305.1_ASM37430v1	-	DSM 45200
Effusibacillus pohliae DSM 22757	1120973	PRJNA174171	174171	Terrabacteria group	Firmicutes	3.36352	54.8	-	AQXL01	135	3466	3280	4/20/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441735	GCA_000376225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/225/GCA_000376225.1_ASM37622v1	-	DSM 22757
Allofustis seminis DSM 15817	1120978	PRJNA174172	174172	Terrabacteria group	Firmicutes	1.44129	37.6	-	ARFP01	14	1450	1354	4/19/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441698	GCA_000374325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/325/GCA_000374325.1_ASM37432v1	-	DSM 15817
Bacillus acidiproducens DSM 23148	444461	PRJNA174173	174173	Terrabacteria group	Firmicutes	3.31848	44.4	-	ARFQ01	103	3346	3125	4/19/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441029	GCA_000374345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/345/GCA_000374345.1_ASM37434v1	-	DSM 23148
Bacteroides gallinarum DSM 18171 = JCM 13658	1121096	PRJNA174174	174174	FCB group	Bacteroidetes/Chlorobi group	4.91758	47.7	-	ARFR01	102	4264	4028	4/19/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441363	GCA_000374365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/365/GCA_000374365.1_ASM37436v1	-	DSM 18171
Bacteroides pyogenes JCM 10003	1235813	PRJDB560	231997	FCB group	Bacteroidetes/Chlorobi group	3.37935	46.2	-	BAIU01	95	2903	2211	12/18/13	4/9/17	Contig	The University of Tokyo	SAMD00016596	GCA_000511775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/775/GCA_000511775.1_ASM51177v1	24482517	JCM 10003
Riemerella columbina DSM 16469	1123058	PRJNA174178	174178	FCB group	Bacteroidetes/Chlorobi group	2.43679	36	-	ARFT01	67	2431	2267	4/19/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441030	GCA_000374405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/405/GCA_000374405.1_ASM37440v1	-	DSM 16469
Bradyrhizobium lupini HPC(L)	1229491	PRJNA174202	174202	Proteobacteria	Alphaproteobacteria	5.27224	59.2	-	AMQQ01	90	4665	4615	10/9/12	1/8/14	Contig	National Environmental Engineering Research Institute 	SAMN02470626	GCA_000304595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/595/GCA_000304595.1_ASM30459v1	23405347	HPC(L)
Brevibacterium casei S18	1229781	PRJNA174308	174308	Terrabacteria group	Actinobacteria	3.66464	68.1	-	AMSP01	43	3273	3174	11/26/12	4/8/17	Contig	Institute of Genomics and Integrative Biology	SAMN02469967	GCA_000314575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/575/GCA_000314575.1_ASM31457v1	-	S18
Clostridium tetanomorphum DSM 665	1230342	PRJNA174458	174458	Terrabacteria group	Firmicutes	5.55369	28.8	-	APJS01	224	5396	5011	4/23/14	4/21/17	Contig	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN02732493	GCA_000647895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/895/GCA_000647895.1_CTM1.0	26572521	DSM 665
Xanthomonas oryzae pv. oryzae	64187	PRJNA303187	303187	Proteobacteria	Gammaproteobacteria	4.67497	63.9	chromosome:NZ_CP013666.1/CP013666.1	-	1	4392	3533	12/15/15	4/11/17	Complete Genome	University of Florida	SAMN04287888	GCA_001466505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/505/GCA_001466505.1_ASM146650v1	26868406	AXO1947
Xanthomonas oryzae pv. oryzicola	129394	PRJNA280380	280380	Proteobacteria	Gammaproteobacteria	5.00829	63.9	chromosome:NZ_CP011958.1/CP011958.1	-	1	4711	3811	6/30/15	4/11/17	Complete Genome	"Bogdanove Lab, Plant Pathology and Plant-Microbe Biology, Cornell University"	SAMN03612260	GCA_001042815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/815/GCA_001042815.1_ASM104281v1	-	CFBP7331
Salimicrobium sp. WN024	2029857	PRJNA400320	400320	Terrabacteria group	Firmicutes	2.62222	47.1	-	NSGH01	61	2681	2576	9/12/17	9/14/17	Contig	"Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences"	SAMN07563698	GCA_002295105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/105/GCA_002295105.1_ASM229510v1	-	WN024
Sinorhizobium saheli	36856	PRJNA302544	302544	Proteobacteria	Alphaproteobacteria	5.99435	63.6	-	LNQB01	102	5611	5333	5/25/16	4/17/17	Scaffold	Ensifer saheli LMG 7837T	SAMN04274563	GCA_001651875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/875/GCA_001651875.1_ASM165187v1	-	LMG 7837
Oceaniovalibus guishaninsula JLT2003	1231392	PRJNA171123	171123	Proteobacteria	Alphaproteobacteria	2.89713	67.4	-	AMGO01	68	2867	2743	9/27/12	4/17/17	Contig	" State Key Laboratory for Marine Environmental Science,  Xiamen University"	SAMN02471016	GCA_000299575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/575/GCA_000299575.1_ASM29957v1	23144420	JLT2003
Xanthomonas oryzae pv. oryzicola	129394	PRJNA280380	280380	Proteobacteria	Gammaproteobacteria	5.01777	63.9	chromosome:NZ_CP011959.1/CP011959.1	-	1	4716	3821	6/30/15	4/11/17	Complete Genome	"Bogdanove Lab, Plant Pathology and Plant-Microbe Biology, Cornell University"	SAMN03612287	GCA_001042835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/835/GCA_001042835.1_ASM104283v1	-	CFBP7341
Legionella drozanskii LLAP-1	1212489	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	3.55811	39.3	-	LNXY01	34	3190	3067	12/15/15	4/16/17	Scaffold	Tel Aviv University	SAMN04274770	GCA_001467585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/585/GCA_001467585.1_ASM146758v1	26752266	ATCC 700990
Mycobacterium haemophilum DSM 44634	1202450	PRJNA171821	171821	Terrabacteria group	Actinobacteria	4.23576	63.9	chromosome:NZ_CP011883.2/CP011883.2	-	1	4027	3750	6/23/15	4/11/17	Complete Genome	Albert Einstein College of Medicine	SAMN01918491	GCA_000340435.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/435/GCA_000340435.3_ASM34043v3	-	ATCC 29548
Halorubrum lipolyticum DSM 21995	1227482	PRJNA174918	174918	Euryarchaeota	Halobacteria	3.42504	68	-	AOJG01	41	3279	3138	2/4/13	4/10/17	Contig	"University of California, Davis"	SAMN02471632	GCA_000337375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/375/GCA_000337375.1_ASM33737v1	25393412	DSM 21995
Nitratireductor pacificus pht-3B	391937	PRJNA174956	174956	Proteobacteria	Alphaproteobacteria	4.46621	65.5	-	AMRM01	51	4284	4175	9/28/12	5/19/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02471160	GCA_000300335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/335/GCA_000300335.1_ASM30033v1	23209217	pht-3B
Nitratireductor basaltis	472175	PRJNA245775	245775	Proteobacteria	Alphaproteobacteria	3.55181	59.8	-	JMQM01	5	3447	3370	7/25/14	4/9/17	Contig	Monash University Malaysia	SAMN02739848	GCA_000733725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/725/GCA_000733725.1_ASM73372v1	25301654	UMTGB225
Nitratireductor sp. ES.061	1855335	PRJEB16457	349399	Proteobacteria	Alphaproteobacteria	4.35293	61.4	-	FNSL01	2	4117	4016	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216452	GCA_900105565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/565/GCA_900105565.1_IMG-taxon_2667528178_annotated_assembly	-	ES.061
Acaricomes phytoseiuli DSM 14247	1120917	PRJNA174970	174970	Terrabacteria group	Actinobacteria	2.41952	62.3	-	AQXM01	64	2291	2136	4/20/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441381	GCA_000376245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/245/GCA_000376245.1_ASM37624v1	-	DSM 14247
Acinetobacter tjernbergiae DSM 14971 = CIP 107465	1120928	PRJNA174971	174971	Proteobacteria	Gammaproteobacteria	3.69238	38.5	-	ARFU01	50	3540	3343	4/19/13	4/6/17	Scaffold	DOE Joint Genome Institute	SAMN02440441	GCA_000374425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/425/GCA_000374425.1_ASM37442v1	-	DSM 14971
Actinokineospora enzanensis DSM 44649	1120934	PRJNA174972	174972	Terrabacteria group	Actinobacteria	8.11986	70.8	-	ARFV01	88	7256	7008	4/19/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441015	GCA_000374445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/445/GCA_000374445.1_ASM37444v1	-	DSM 44649
Ahrensia kielensis DSM 5890	1120961	PRJNA174973	174973	Proteobacteria	Alphaproteobacteria	3.36477	48.1	-	ARFW01	13	3292	3207	4/19/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441016	GCA_000374465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/465/GCA_000374465.1_ASM37446v1	-	DSM 5890
Algicola sagamiensis DSM 14643	1120963	PRJNA174974	174974	Proteobacteria	Gammaproteobacteria	4.34128	42.8	-	ARFX01	37	4031	3889	4/19/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441017	GCA_000374485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/485/GCA_000374485.1_ASM37448v1	-	DSM 14643
Anaeromusa acidaminophila DSM 3853	1120992	PRJNA174977	174977	Terrabacteria group	Firmicutes	3.47581	48.8	-	ARGA01	61	3368	3238	4/19/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440443	GCA_000374545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/545/GCA_000374545.1_ASM37454v1	-	DSM 3853
Bacillus fordii DSM 16014 = CIP 108821	1121090	PRJNA174978	174978	Terrabacteria group	Firmicutes	4.50944	41.2	-	ARGB01	45	4375	4170	4/19/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441018	GCA_000374565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/565/GCA_000374565.1_ASM37456v1	-	DSM 16014
Bacteroides barnesiae DSM 18169 = JCM 13652	1121094	PRJNA174979	174979	FCB group	Bacteroidetes/Chlorobi group	3.61991	46.9	-	ARGC01	42	3087	2906	4/19/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441019	GCA_000374585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/585/GCA_000374585.1_ASM37458v1	-	DSM 18169
Bacteroides graminisolvens DSM 19988 = JCM 15093	1121097	PRJNA174980	174980	FCB group	Bacteroidetes/Chlorobi group	3.6334	41.5	-	ATZI01	32	3090	2963	7/15/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441226	GCA_000428125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/125/GCA_000428125.1_ASM42812v1	-	DSM 19988
Brachymonas chironomi DSM 19884	1121116	PRJNA174982	174982	Proteobacteria	Betaproteobacteria	2.50356	63.6	-	ARGE01	35	2430	2290	4/19/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441699	GCA_000374625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/625/GCA_000374625.1_ASM37462v1	26203340	DSM 19884
Chitinilyticum litopenaei DSM 21440	529086	PRJNA174984	174984	Proteobacteria	Betaproteobacteria	3.96845	62.6	-	ATZJ01	86	3609	3447	7/15/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441212	GCA_000428145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/145/GCA_000428145.1_ASM42814v1	-	DSM 21440
Arhodomonas aquaeolei DSM 8974	1121016	PRJNA174985	174985	Proteobacteria	Gammaproteobacteria	3.95777	69.4	-	ARGF01	48	3581	3481	4/19/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441700	GCA_000374645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/645/GCA_000374645.1_ASM37464v1	-	DSM 8974
Pusillimonas noertemannii BS8	1231391	PRJNA174877	174877	Proteobacteria	Betaproteobacteria	3.91698	62.9	-	AMZF01	121	3611	3504	10/30/12	4/17/17	Contig	LSHTM	SAMN01164170	GCA_000308195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/195/GCA_000308195.1_PusiNoerBS8	-	BS8
Moraxella sp. HMSC061H09	1715217	PRJNA296180	296180	Proteobacteria	Gammaproteobacteria	1.89991	41.5	-	LTKA01	46	1781	1651	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04495798	GCA_001809255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/255/GCA_001809255.1_ASM180925v1	-	HMSC061H09
Chitiniphilus shinanonensis DSM 23277	1121280	PRJNA175157	175157	Proteobacteria	Betaproteobacteria	4.15163	66.4	-	ARGN01	42	3685	3559	4/19/13	5/18/17	Scaffold	DOE Joint Genome Institute	SAMN02441687	GCA_000374805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/805/GCA_000374805.1_ASM37480v1	-	DSM 23277
Paenibacillus terrigena DSM 21567	1122927	PRJNA175159	175159	Terrabacteria group	Firmicutes	6.36156	46.1	-	ARGP01	40	5838	5662	4/19/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440446	GCA_000374845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/845/GCA_000374845.1_ASM37484v1	-	DSM 21567
Hyphomicrobium nitrativorans NL23	1029756	PRJNA229194	229194	Proteobacteria	Alphaproteobacteria	3.65384	63.9	chromosome:NC_022997.1/CP006912.1	-	1	3400	3279	12/4/13	4/9/17	Complete Genome	INRS-Institut Armand-Frappier	SAMN02641510	GCA_000503895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/895/GCA_000503895.1_ASM50389v1	24435868	NL23
Pelomonas sp. Root1237	1736434	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	6.4334	67.6	-	LMDK01	22	5753	5591	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155703	GCA_001425055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/055/GCA_001425055.1_Root1237	26633631	Root1237
Rhizobacter sp. Root29	1736511	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	6.51293	69	-	LMCN01	45	5872	5683	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155780	GCA_001424785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/785/GCA_001424785.1_Root29	26633631	Root29
Spiribacter curvatus	1335757	PRJNA203688	203688	Proteobacteria	Gammaproteobacteria	1.92663	63.9	chromosome:NC_022664.1/CP005990.1	-	1	1908	1827	10/29/13	4/9/17	Complete Genome	"Evolutionary Genomics Group, Universidad Miguel Hernandez, San Juan de Alicante, Spain"	SAMN02603231	GCA_000485905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/905/GCA_000485905.1_ASM48590v1	"2,422,534,126,394,790"	UAH-SP71
Nitratireductor indicus C115	1231190	PRJNA175132	175132	Proteobacteria	Alphaproteobacteria	4.99248	60.9	-	AMSI01	75	4856	4734	10/1/12	5/19/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02471165	GCA_000300515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/515/GCA_000300515.1_ASM30051v1	23209238	C115
Pseudomonas stutzeri	316	PRJNA68131	68131	Proteobacteria	Gammaproteobacteria	4.54793	63.9	chromosome:NC_015740.1/CP002881.1	-	1	4242	4047	6/29/11	3/30/17	Complete Genome	"Biotechnology Research Institute, Chinese Academy of Agricultural Sciences"	SAMN02603041	GCA_000219605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/605/GCA_000219605.1_ASM21960v1	21994926	CGMCC 1.1803
Donghicola sp. JL3646	1836468	PRJNA318710	318710	Proteobacteria	Alphaproteobacteria	3.12345	56	-	LZFQ01	44	3114	2966	6/21/16	4/13/17	Contig	Xiamen University	SAMN04633453	GCA_001673765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/765/GCA_001673765.1_ASM167376v1	-	JL3646
Staphylococcus chromogenes MU 970	1220551	PRJNA172066	172066	Terrabacteria group	Firmicutes	2.34454	36.6	-	JMJF01	38	2300	2175	6/2/14	4/17/17	Contig	University of Missouri - Columbia	SAMN02739851	GCA_000696815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/815/GCA_000696815.1_SCHRMU_9701.0	25125652	MU 970
Dyella ginsengisoli LA-4	1234364	PRJNA175542	175542	Proteobacteria	Gammaproteobacteria	4.54686	67.7	-	AMSF01	99	4089	3966	1/31/13	5/18/17	Contig	Shanghai Jiao Tong University	SAMN02470943	GCA_000334915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/915/GCA_000334915.1_version_1_of_the_Dyella_ginsengisoli_LA-4_genome	24265495	LA-4
Thauera aminoaromatica S2	1234381	PRJNA175413	175413	Proteobacteria	Betaproteobacteria	4.2807	68.7	-	AMXD01	317	4014	3627	11/6/12	6/20/17	Contig	Norwegian University of Life Sciences	SAMN02470715	GCA_000310185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/185/GCA_000310185.1_ASM31018v1	-	S2
Thauera linaloolentis 47Lol = DSM 12138	1123367	PRJNA221064	221064	Proteobacteria	Betaproteobacteria	4.21434	66.6	-	JHYR01	45	3833	3700	4/8/14	6/20/17	Scaffold	DOE Joint Genome Institute	SAMN02743986	GCA_000621305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/305/GCA_000621305.1_ASM62130v1	-	DSM 12138
Paraclostridium bifermentans ATCC 638	1233171	PRJNA175456	175456	Terrabacteria group	Firmicutes	3.60417	28.4	-	AVNC01	22	3516	3389	8/20/13	4/11/17	Contig	Institute for Genome Sciences	SAMN01978893	GCA_000452245.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/245/GCA_000452245.2_ASM45224v2	-	ATCC 638
Thauera phenylacetica B4P	1234382	PRJNA175416	175416	Proteobacteria	Betaproteobacteria	5.02239	68.6	-	AMXF01	681	4747	4208	11/6/12	6/20/17	Contig	Norwegian University of Life Sciences	SAMN02470717	GCA_000310225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/225/GCA_000310225.1_ASM31022v1	-	B4P
Catellicoccus marimammalium M35/04/3	1234409	PRJNA175483	175483	Terrabacteria group	Firmicutes	1.28587	33.9	-	AMYT01	25	1255	1196	11/21/12	4/17/17	Contig	Georgia Institute of Technology	SAMN02469835	GCA_000313915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/915/GCA_000313915.1_CMarimammalium1.0	23405330	M35/04/3
Pseudomonas stutzeri A1501	379731	PRJNA16817	16817	Proteobacteria	Gammaproteobacteria	4.56742	63.9	chromosome:NC_009434.1/CP000304.1	-	1	4270	4108	4/20/07	5/19/17	Complete Genome	"The Biotechnology Research Institute,The Chinese Academy of Agricultural Sciences"	SAMN02603910	GCA_000013785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/785/GCA_000013785.1_ASM1378v1	18495935	A1501
Gayadomonas joobiniege G7	1046714	PRJNA175618	175618	Proteobacteria	Gammaproteobacteria	3.91043	41.4213	plasmid pG7:NZ_AMRX01000008.1/AMRX01000008.1	AMRX01	8	3458	3350	10/1/12	4/8/17	Contig	Yonsei University	SAMN02472144	GCA_000300815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/815/GCA_000300815.1_Gayjoov1	23209220	G7
Bhargavaea cecembensis	394098	PRJEB7546	264168	Terrabacteria group	Firmicutes	3.10808	57.7	-	CDGP01	71	3138	2911	11/19/14	4/10/17	Contig	URMITE	SAMEA2821807	GCA_000826125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/125/GCA_000826125.1_Bhargavaea_cecembensis_B-C2	-	B-C2
Herbaspirillum huttiense subsp. putei IAM 15032	1235558	PRJNA175917	175917	Proteobacteria	Betaproteobacteria	5.77792	62.3	-	ANJR01	32	5272	4812	12/17/12	4/17/17	Contig	Universidade Federal do Parana	SAMN02471379	GCA_000478365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/365/GCA_000478365.1_Hputei1.0	23469362	IAM 15032
Chromohalobacter salexigens DSM 3043	290398	PRJNA12636	12636	Proteobacteria	Gammaproteobacteria	3.69665	63.9	chromosome:NC_007963.1/CP000285.1	-	1	3390	3282	4/11/06	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02598275	GCA_000055785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/055/785/GCA_000055785.1_ASM5578v1	22675587	DSM 3043
Salinicoccus carnicancri Crm	1235755	PRJNA175941	175941	Terrabacteria group	Firmicutes	2.66903	47.9	-	ANAM01	12	2730	2638	1/2/13	4/17/17	Contig	Kyung Hee University	SAMN02470212	GCA_000330705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/705/GCA_000330705.1_Crm	-	Crm
Enterorhabdus caecimuris B7	1235794	PRJNA175986	175986	Terrabacteria group	Actinobacteria	2.95562	64.1	-	ASSY01	6	2483	2377	5/29/13	4/17/17	Scaffold	Broad Institute	SAMN01730995	GCA_000403355.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/355/GCA_000403355.2_Ente_caec_B7_V1	-	B7
Anaerotruncus sp. G3(2012)	1235835	PRJNA175989	175989	Terrabacteria group	Firmicutes	3.62038	54.5	-	ASTA01	24	3513	3251	5/29/13	4/8/17	Scaffold	Broad Institute	SAMN01730997	GCA_000403395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/395/GCA_000403395.2_Anae_bact_G3_V1	-	G3
Firmicutes bacterium M10-2	1235796	PRJNA175990	175990	Terrabacteria group	Firmicutes	2.40752	40.7	-	ASTB01	22	2321	2184	5/29/13	4/8/17	Scaffold	Broad Institute	SAMN01730998	GCA_000403415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/415/GCA_000403415.2_Firm_bact_M10-2_V1	-	M10-2
Lactobacillus murinus ASF361	1235801	PRJNA176001	176001	Terrabacteria group	Firmicutes	2.17158	40.2	-	AQFS01	11	2140	1960	4/8/13	4/8/17	Scaffold	Broad Institute	SAMN01731005	GCA_000364205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/205/GCA_000364205.1_Lact_muri_ASF361_V1	24723722	ASF361
Eubacterium plexicaudatum ASF492	1235802	PRJNA176002	176002	Terrabacteria group	Firmicutes	6.50882	43.2	-	AQFT01	34	6172	5640	4/8/13	5/18/17	Scaffold	Broad Institute	SAMN01731006	GCA_000364225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/225/GCA_000364225.1_Euba_plex_ASF492_V1	24723722	ASF492
candidate division TM7 bacterium JGI 0001002-L20	1094954	PRJNA176055	176055	unclassified Bacteria	Bacteria candidate phyla	0.752653	46.4	-	AUNW02	68	-	-	7/16/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440694	GCA_000463895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/895/GCA_000463895.2_ASM46389v2	-	JGI 0001002-L20
Arenimonas sp. SCN 70-307	1660089	PRJNA279279	279279	Proteobacteria	Gammaproteobacteria	2.92847	70.3	-	MEDO01	35	2666	2582	9/13/16	9/13/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03652434	GCA_001724815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/815/GCA_001724815.1_ASM172481v1	26031303	-
Clostridium tunisiense TJ	1233099	PRJNA175408	175408	Terrabacteria group	Firmicutes	4.30839	31.2	-	AMQH01	60	3976	3804	9/28/12	5/18/17	Contig	Zhejiang University	SAMN02472167	GCA_000300195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/195/GCA_000300195.1_ASM30019v1	23209212	TJ
Chitinophaga sp. MD30	2033437	PRJNA401037	401037	FCB group	Bacteroidetes/Chlorobi group	7.6613	47.6	chromosome:NZ_CP023254.1/CP023254.1	-	1	5851	5692	9/12/17	9/14/17	Chromosome	University of Hawaii at Manoa	SAMN07593758	GCA_002290065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/065/GCA_002290065.1_ASM229006v1	-	MD30
Blastomonas sp. RAC04	1842535	PRJNA319833	319833	Proteobacteria	Alphaproteobacteria	4.4035	63.8812	chromosome:NZ_CP016460.1/CP016460.1; plasmid pBSY18_1:NZ_CP016462.1/CP016462.1; plasmid pBSY18_2:NZ_CP016458.1/CP016458.1; plasmid pBSY18_3:NZ_CP016459.1/CP016459.1; plasmid pBSY18_4:NZ_CP016461.1/CP016461.1	-	5	4130	4026	8/25/16	4/13/17	Complete Genome	Los Alamos National Laboratory	SAMN04909709	GCA_001713435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/435/GCA_001713435.1_ASM171343v1	-	RAC04
Bacillus stratosphericus LAMA 585	1236481	PRJNA176166	176166	Terrabacteria group	Firmicutes	3.70564	41.1868	plasmid pBSt1:NZ_APAS01000019.1/APAS01000019.1	APAS01	19	3879	3759	3/12/13	4/1/17	Contig	Universidade do Vale do Itajaí (UNIVALI)	SAMN02471373	GCA_000353245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/245/GCA_000353245.1_BStr_LAMA585_V1	23640380	LAMA 585
Thiomonas intermedia K12	75379	PRJNA33641	33641	Proteobacteria	Betaproteobacteria	3.4621	63.8464	chromosome:NC_014153.1/CP002021.1; plasmid pTINT01:NC_014154.1/CP002022.1; plasmid pTINT02:NC_014155.1/CP002023.1	-	3	3296	3157	5/5/10	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598504	GCA_000092605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/605/GCA_000092605.1_ASM9260v1	-	K12
Mycobacterium simiae	1784	PRJNA276839	276839	Terrabacteria group	Actinobacteria	5.9388	66.3	chromosome:NZ_CP010996.1/CP010996.1	-	1	5606	5387	3/10/16	4/12/17	Chromosome	BEI Resources/American Type	SAMN03381263	GCA_001584765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/765/GCA_001584765.1_ASM158476v1	-	MO323
Mycobacterium bohemicum DSM 44277	1236609	PRJEB5741	239989	Terrabacteria group	Actinobacteria	5.09719	68.8	-	CSTD01	18	4865	4427	3/22/15	8/1/17	Scaffold	URMITE	SAMEA3305052	GCA_001053185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/185/GCA_001053185.1_PRJEB5741_assembly_1	-	DSM 44277
Leptospira wolbachii serovar Codice str. CDC	1218599	PRJNA177156	177156	Spirochaetes	Spirochaetia	4.08198	39.2	-	AOGZ02	25	3893	3767	1/18/13	4/17/17	Contig	J. Craig Venter Institute	SAMN02436569	GCA_000332515.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/515/GCA_000332515.2_gls454195v02	-	CDC
Leptospira vanthielii serovar Holland str. Waz Holland = ATCC 700522	1218591	PRJNA177160	177160	Spirochaetes	Spirochaetia	4.23233	38.9	-	AOGY02	89	4138	3885	1/18/13	5/19/17	Contig	J. Craig Venter Institute	SAMN02436568	GCA_000332455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/455/GCA_000332455.2_gls454199v02	-	Waz Holland
Streptomyces bottropensis ATCC 25435	1054862	PRJNA176092	176092	Terrabacteria group	Actinobacteria	8.91473	71.2	-	AOCF01	43	7882	7504	2/6/13	5/19/17	Scaffold	"Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences"	SAMN02471210	GCA_000340335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/335/GCA_000340335.2_ASM34033v2	23516178	ATCC 25435
Caenispirillum salinarum AK4	1238182	PRJNA176164	176164	Proteobacteria	Alphaproteobacteria	4.95247	68.8	-	ANHY01	61	4542	4416	11/29/12	5/18/17	Contig	IMTECH	SAMN01840338	GCA_000315795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/795/GCA_000315795.1_Caenispirillum_salinarum	23409257	AK4
Fulvivirga imtechensis AK7	1237149	PRJNA176346	176346	FCB group	Bacteroidetes/Chlorobi group	6.73786	42.4	-	AMZN01	226	5579	5405	1/11/13	5/18/17	Contig	Institute of Microbial Technology	SAMN02469986	GCA_000331535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/535/GCA_000331535.1_Fulvivirga_imtechensis_Genome_Sequencing	-	AK7
Amycolatopsis azurea DSM 43854	1238180	PRJNA175934	175934	Terrabacteria group	Actinobacteria	9.22345	68.9	-	ANMG01	154	8593	8348	2/12/13	5/18/17	Contig	IMTECH	SAMN01939083	GCA_000340415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/415/GCA_000340415.1_Amycolatopsis_azurea	-	DSM 43854
Halomonas jeotgali Hwa	1238190	PRJNA175943	175943	Proteobacteria	Gammaproteobacteria	2.8471	62.9	-	AMQY01	26	2601	2475	1/29/13	4/17/17	Contig	Kyung Hee University	SAMN02470210	GCA_000334215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/215/GCA_000334215.1_Hwa	-	Hwa
Oceanobacillus kimchii X50	1238184	PRJNA175944	175944	Terrabacteria group	Firmicutes	3.83078	35.2	chromosome:NZ_CM001792.1/CM001792.1	AOCX01	1	3813	3704	1/22/13	4/17/17	Chromosome	Kyung Hee University	SAMN02470215	GCA_000340475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/475/GCA_000340475.1_ASM34047v1	-	X50
Leucobacter salsicius M1-8	1238186	PRJNA175945	175945	Terrabacteria group	Actinobacteria	3.18542	64.5	-	AOCN01	28	2862	2741	4/3/13	4/17/17	Contig	Kyunghee University	SAMN02470216	GCA_000350525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/525/GCA_000350525.1_Leucobacter_salsicius_M1-8T_draft_genome	-	M1-8
Mycobacterium farcinogenes	1802	PRJEB5746	240187	Terrabacteria group	Actinobacteria	6.13989	66.3	-	CCAY01	5	5805	5577	3/19/14	4/17/17	Scaffold	URMITE	SAMEA3139027	GCA_000723385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/385/GCA_000723385.1_PRJEB5746_assembly_1	-	DSM 43637
Moraxella macacae 0408225	1230338	PRJNA174162	174162	Proteobacteria	Gammaproteobacteria	2.08466	39.6941	plasmid pMoma1:NZ_ANIN01000003.1/ANIN01000003.1	ANIN01	3	1904	1820	12/13/12	4/17/17	Contig	USAMRIID	SAMN02472058	GCA_000320365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/320/365/GCA_000320365.1_MorMac1.0	23409273	408225
Sphingobium chlorophenolicum L-1	690566	PRJNA50015	50015	Proteobacteria	Alphaproteobacteria	4.57322	63.8346	chromosome 1:NC_015593.1/CP002798.1; chromosome 2:NC_015594.1/CP002799.1; plasmid pSPHCH01:NC_015595.1/CP002800.1	-	3	4223	4029	5/26/11	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00016829	GCA_000147835.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/835/GCA_000147835.3_ASM14783v3	-	L-1
Paraglaciecola chathamensis S18K6	1127672	PRJDB24	176787	Proteobacteria	Gammaproteobacteria	5.26546	44.1	-	BAEM01	63	4518	4390	10/6/12	5/18/17	Contig	Shandong University	SAMD00036599	GCA_000314955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/955/GCA_000314955.1_ASM31495v1	25009843	S18K6
Aliiglaciecola lipolytica E3	1127673	PRJDB25	176788	Proteobacteria	Gammaproteobacteria	4.84214	40.8	-	BAEN01	76	4250	4128	10/6/12	5/18/17	Contig	Shandong University	SAMD00036600	GCA_000314975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/975/GCA_000314975.1_ASM31497v1	25009843	E3
Paraglaciecola arctica BSs20135	493475	PRJDB28	176789	Proteobacteria	Gammaproteobacteria	5.96446	40.1	-	BAEO01	72	5191	5024	10/6/12	5/18/17	Contig	Shandong University	SAMD00036601	GCA_000314995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/995/GCA_000314995.1_ASM31499v1	25009843	BSs20135
Paraglaciecola mesophila KMM 241	1128912	PRJDB29	176790	Proteobacteria	Gammaproteobacteria	5.05576	44.3	-	BAEP01	90	4424	4268	10/6/12	5/18/17	Contig	Shandong University	SAMD00036602	GCA_000315015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/015/GCA_000315015.1_ASM31501v1	25009843	KMM 241
Glaciecola pallidula DSM 14239 = ACAM 615	1121922	PRJNA185358	185358	Proteobacteria	Gammaproteobacteria	4.36305	41.2	-	AUAV01	29	3845	3672	7/15/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440876	GCA_000428905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/905/GCA_000428905.1_ASM42890v1	-	DSM 14239
Paraglaciecola polaris LMG 21857	1129793	PRJDB32	176792	Proteobacteria	Gammaproteobacteria	5.2395	44.1	-	BAER01	146	4599	4338	10/6/12	5/18/17	Contig	Shandong University	SAMD00036604	GCA_000315055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/055/GCA_000315055.1_ASM31505v1	25009843	LMG 21857
Streptomyces davawensis JCM 4913	1214101	PRJEB184	177086	Terrabacteria group	Actinobacteria	9.55595	70.5935	chromosome:NC_020504.1/HE971709.1; plasmid pSDA1:NC_020545.1/HE971710.1	-	2	8667	8308	10/9/12	5/19/17	Chromosome	CeBiTec	SAMEA2272568	GCA_000349325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/325/GCA_000349325.1_ASM34932v1	23043000	JCM 4913
Butyricimonas sp. Marseille-P2440	1816677	PRJEB14540	326496	FCB group	Bacteroidetes/Chlorobi group	4.9653	44.6	-	FLSM01	10	4076	3952	6/23/16	4/13/17	Scaffold	URMITE	SAMEA4043116	GCA_900091675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/675/GCA_900091675.1_PRJEB14540	-	Marseille-P2440
Zobellella denitrificans	347534	PRJNA294591	294591	Proteobacteria	Gammaproteobacteria	4.17422	63.8	chromosome:CP012621.1	-	1	3871	3637	10/2/17	10/2/17	Complete Genome	The Third Institute of State Oceanic Administration	SAMN04027252	GCA_002407485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/407/485/GCA_002407485.1_ASM240748v1	-	F13-1
Halodesulfurarchaeum formicicum	1873524	PRJNA323694	323694	Euryarchaeota	Halobacteria	1.97228	63.8	chromosome:NZ_CP016070.1/CP016070.1	-	1	2053	1985	10/18/16	4/13/17	Complete Genome	C.N.R. - Institute for Coastal Marine Environment (IAMC)	SAMN05185403	GCA_001767315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/315/GCA_001767315.1_ASM176731v1	-	HTSR1
Haloferax sp. BAB2207	1243180	PRJNA177651	177651	Euryarchaeota	Halobacteria	3.74471	65.8	-	ANPG01	777	4013	3082	12/21/12	4/8/17	Contig	Gujarat Genomics Initiative	SAMN02469860	GCA_000328285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/285/GCA_000328285.1_Haloferax_sp._BAB2207_V.1	-	BAB2207
Stenotrophomonas nitritireducens	83617	PRJNA330867	330867	Proteobacteria	Gammaproteobacteria	4.54173	63.8	chromosome:NZ_CP016756.1/CP016756.1	-	1	3937	3786	8/9/16	4/17/17	Complete Genome	Konkuk University	SAMN05428703	GCA_001700965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/965/GCA_001700965.1_ASM170096v1	-	2001
Streptomyces himastatinicus ATCC 53653	457427	PRJNA33605	33605	Terrabacteria group	Actinobacteria	11.03	70	-	ACEX01	2	9521	8071	2/26/09	5/19/17	Scaffold	Broad Institute	SAMN02595299	GCA_000158915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/915/GCA_000158915.1_ASM15891v1	-	ATCC 53653
Bradyrhizobium sp.	376	PRJEB10689	321395	Proteobacteria	Alphaproteobacteria	7.54769	63.8	chromosome I:NZ_LN901633.1/LN901633.1	-	1	7318	7018	5/12/16	4/17/17	Complete Genome	ROTHAMSTED RESEARCH	SAMEA3647810	GCA_900011245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/245/GCA_900011245.1_BF49.v1	-	-
Stenotrophomonas sp. KCTC 12332	1793721	PRJNA310387	310387	Proteobacteria	Gammaproteobacteria	4.54159	63.8	chromosome:NZ_CP014274.1/CP014274.1	-	1	3938	3752	2/17/16	4/11/17	Complete Genome	Korea Polar Research Institute	SAMN04451766	GCA_001562215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/215/GCA_001562215.1_ASM156221v1	-	YM1
Anoxybacillus kamchatkensis G10	1212546	PRJNA170961	170961	Terrabacteria group	Firmicutes	2.85866	41.3	-	ALJT01	65	3049	2915	8/6/12	4/17/17	Contig	KRIBB	SAMN02470192	GCA_000283415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/415/GCA_000283415.1_G10_01	23144421	G10
Marinimicrobia bacterium JGI 0000113-D11	1245608	PRJNA177752	177752	FCB group	Candidatus Marinimicrobia	1.84259	33.2	-	AYLG01	384	-	-	10/31/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440738	GCA_000494725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/725/GCA_000494725.1_ASM49472v1	-	JGI 0000113-D11
Halomonas zhanjiangensis DSM 21076	574966	PRJNA178047	178047	Proteobacteria	Gammaproteobacteria	4.05878	54.5	-	ARIT01	16	3715	3606	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441684	GCA_000377665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/665/GCA_000377665.1_ASM37766v1	-	DSM 21076
Salsuginibacillus kocurii DSM 18087	1123239	PRJNA178049	178049	Terrabacteria group	Firmicutes	3.83178	43.2	-	ARIV01	23	3664	3525	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441685	GCA_000377705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/705/GCA_000377705.1_ASM37770v1	-	DSM 18087
Pseudomonas umsongensis	198618	PRJEB16442	349334	Proteobacteria	Gammaproteobacteria	6.74927	59.7	chromosome I:NZ_LT629767.1/LT629767.1	-	1	6178	5936	10/21/16	4/13/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04490206	GCA_900105285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/285/GCA_900105285.1_IMG-taxon_2639762618_annotated_assembly	-	BS3657
SAR86 cluster bacterium SAR86A	1123866	PRJNA76773	76773	Proteobacteria	Gammaproteobacteria	1.25039	32.8	-	AHBG01	2	1336	1298	2/24/12	8/12/14	Scaffold	J. Craig Venter Institute	SAMN02954345	GCA_000252525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/525/GCA_000252525.1_SAR86A_1.0	22170421	-
SAR86 cluster bacterium SAR86B	1123867	PRJNA76775	76775	Proteobacteria	Gammaproteobacteria	1.74902	33.2	-	AHBH01	36	1853	1809	2/24/12	8/12/14	Scaffold	J. Craig Venter Institute	SAMN02954345	GCA_000252545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/545/GCA_000252545.1_SAR86B_1.0	22170421	-
Massilia sp. NR 4-1	1678028	PRJNA288534	288534	Proteobacteria	Betaproteobacteria	6.36142	63.8	chromosome:NZ_CP012201.1/CP012201.1	-	1	5503	5279	8/3/15	4/10/17	Complete Genome	Chung-Ang University	SAMN03801557	GCA_001191005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/005/GCA_001191005.1_ASM119100v1	-	NR 4-1
Arthrobacter crystallopoietes BAB-32	1246476	PRJNA178057	178057	Terrabacteria group	Actinobacteria	4.34861	66.7	-	ANPE02	347	4193	3720	12/21/12	5/18/17	Contig	Gujarat Genomics Initiative	SAMN02469858	GCA_000328305.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/305/GCA_000328305.2_Arthrobacter_crystallopoitesv3.1	23833141	BAB-32
Brevibacillus agri 5-2	1444307	PRJNA233552	233552	Terrabacteria group	Firmicutes	5.51372	54.2	-	JATL01	146	5292	5043	4/2/14	4/9/17	Contig	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN02585235	GCA_000612125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/125/GCA_000612125.1_BreAgr1.0	-	2-May
Fibrella aestuarina BUZ 2	1166018	PRJEA114711	114711	FCB group	Bacteroidetes/Chlorobi group	6.93726	56.4114	chromosome:NC_020054.1/HE796683.1; plasmid pFAES01:NC_019012.1/HE796684.1	-	2	5790	5677	4/5/12	5/18/17	Chromosome	"Center for Biotechnology, Bielefeld University"	SAMEA2272250	GCA_000331105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/105/GCA_000331105.1_ASM33110v1	22689241	BUZ 2
Vibrio jasicida	766224	PRJDB3037	258137	Proteobacteria	Gammaproteobacteria	5.99288	45	-	BBKZ01	79	5500	5273	1/7/15	4/10/17	Scaffold	University of Illinois at Urbana-Champaign	SAMD00019137	GCA_000818715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/715/GCA_000818715.1_ASM81871v1	25527835	200612G
Halobacillus sp. BAB-2008	1246484	PRJNA178059	178059	Terrabacteria group	Firmicutes	3.78475	46.8	-	ANPF01	137	3974	3748	12/21/12	4/8/17	Contig	Gujarat Genomics Initiative	SAMN02469862	GCA_000328325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/325/GCA_000328325.1_Halobacillus_sp._BAB-2008v3.1	23469348	BAB-2008
Thermanaerovibrio acidaminovorans DSM 6589	525903	PRJNA29531	29531	Synergistetes	Synergistia	1.84847	63.8	chromosome:NC_013522.1/CP001818.1	-	1	1821	1730	11/19/09	8/28/16	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002595	GCA_000024905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/905/GCA_000024905.1_ASM2490v1	21304665	DSM 6589
Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162	1293597	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.0526	47.7	-	AZDU01	182	1949	1834	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369379	GCA_001434815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/815/GCA_001434815.1_ASM143481v1	26415554	DSM 19284
Gilvimarinus chinensis DSM 19667	1121921	PRJNA178475	178475	Proteobacteria	Gammaproteobacteria	4.06887	51.2	-	ARIX01	18	3676	3549	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441352	GCA_000377745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/745/GCA_000377745.1_ASM37774v1	-	DSM 19667
Gracilibacillus lacisalsi DSM 19029	1121929	PRJNA178476	178476	Terrabacteria group	Firmicutes	4.40925	36.8	-	ARIY01	44	4287	4145	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441353	GCA_000377765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/765/GCA_000377765.1_ASM37776v1	-	DSM 19029
Alloscardovia criceti DSM 17774	1122228	PRJNA178477	178477	Terrabacteria group	Actinobacteria	1.88465	50.1	-	AQXR01	11	1580	1475	4/22/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441737	GCA_000376885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/885/GCA_000376885.1_ASM37688v1	-	DSM 17774
Halococcus morrhuae DSM 1307	931277	PRJNA174897	174897	Euryarchaeota	Halobacteria	2.99156	63.8	-	AOMC01	167	3037	2802	2/4/13	3/29/17	Contig	"University of California, Davis"	SAMN02471675	GCA_000336695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/695/GCA_000336695.1_ASM33669v1	25393412	DSM 1307
Mariniradius saccharolyticus AK6	1239962	PRJNA176475	176475	FCB group	Bacteroidetes/Chlorobi group	4.85442	46.7	-	AMZY02	39	4242	4171	1/2/13	5/19/17	Contig	Institute of Microbial Technology	SAMN02469987	GCA_000330725.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/725/GCA_000330725.2_ASM33072v2	-	AK6
Sphingopyxis fribergensis	1515612	PRJNA253568	253568	Proteobacteria	Alphaproteobacteria	5.20217	63.7957	chromosome:NZ_CP009122.1/CP009122.1; plasmid pSfKp5.2:NZ_CP009123.1/CP009123.1	-	2	4934	4759	12/18/14	4/9/17	Complete Genome	Bielefeld University	SAMN02872841	GCA_000803645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/645/GCA_000803645.1_ASM80364v1	26040579	Kp5.2
Thioclava nitratireducens	1915078	PRJNA352319	352319	Proteobacteria	Alphaproteobacteria	4.23825	63.7799	chromosome:NZ_CP019437.1/CP019437.1; plasmid unnamed1:NZ_CP019438.1/CP019438.1; plasmid unnamed2:NZ_CP019439.1/CP019439.1	-	3	4102	3925	2/21/17	2/23/17	Complete Genome	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05969900	GCA_001940525.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/525/GCA_001940525.2_ASM194052v2	-	25B10_4
Arthrobacter sp. Hiyo8	1588023	PRJDB3373	291832	Terrabacteria group	Actinobacteria	5.02672	63.7589	chromosome Unknown:AP014719.1; plasmid pHiyo8-1:AP014720.1; plasmid pHiyo8-2:AP014721.1	-	3	7108	7038	8/4/15	8/5/15	Complete Genome	"Department of Computational Biology, Graduate School of Frontier Sciences, The University of Tokyo"	SAMD00024045	GCA_001549895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/895/GCA_001549895.1_ASM154989v1	-	Hiyo8
Pseudomonas sp. MRSN12121	1611770	PRJNA273956	273956	Proteobacteria	Gammaproteobacteria	6.98676	63.7496	chromosome:NZ_CP010892.1/CP010892.1; plasmid pMRVIM0812:NZ_CP010893.1/CP010893.1; plasmid unnamed:NZ_CP010894.1/CP010894.1	-	3	6531	6348	2/23/15	4/10/17	Complete Genome	Walter Reed Army Institute of Research	SAMN03316900	GCA_000931465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/465/GCA_000931465.1_ASM93146v1	-	MRSN12121
Acidovorax sp. P3	1662457	PRJNA285679	285679	Proteobacteria	Betaproteobacteria	4.56563	63.7308	chromosome:NZ_CP021362.1/CP021362.1; plasmid pACP3.1:NZ_CP021363.1/CP021363.1; plasmid pACP3.2:NZ_CP021364.1/CP021364.1; plasmid pACP3.3:NZ_CP021365.1/CP021365.1	-	4	4273	3667	5/24/17	8/5/17	Complete Genome	University of North Carolina - Chapel Hill	SAMN03755633	GCA_002157185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/185/GCA_002157185.1_ASM215718v1	-	P3
Deinococcus peraridilitoris DSM 19664	937777	PRJNA61295	61295	Terrabacteria group	Deinococcus-Thermus	4.51371	63.71	chromosome:NC_019793.1/CP003382.1; plasmid pDEIPE01:NC_019789.1/CP003383.1; plasmid pDEIPE02:NC_019790.1/CP003384.1	-	3	4379	4223	12/10/12	5/18/17	Complete Genome	JGI	SAMN02261392	GCA_000317835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/835/GCA_000317835.1_ASM31783v1	-	DSM 19664
Alicyclobacillus acidiphilus NBRC 100859	1255277	PRJDB697	179350	Terrabacteria group	Firmicutes	3.86526	54.9	-	BCQI01	165	3755	3549	1/29/16	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00046313	GCA_001544355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/355/GCA_001544355.1_ASM154435v1	-	NBRC 100859
Leptospira terpstrae serovar Hualin str. LT 11-33 = ATCC 700639	1257025	PRJNA178717	178717	Spirochaetes	Spirochaetia	4.09219	38.2	-	AOGW02	23	3895	3794	1/18/13	4/17/17	Contig	J. Craig Venter Institute	SAMN02436484	GCA_000332495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/495/GCA_000332495.2_gls454203v02	-	LT 11-33
Geopsychrobacter electrodiphilus DSM 16401	1121918	PRJNA179458	179458	Proteobacteria	delta/epsilon subdivisions	4.24173	53.2	-	ARWE01	1	3895	3803	4/26/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441294	GCA_000384395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/395/GCA_000384395.1_ASM38439v1	-	DSM 16401
Coprothermobacter platensis DSM 11748	1259795	PRJNA179460	179460	Terrabacteria group	Firmicutes	1.42438	42.5	-	ARJK01	2	1468	1401	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440465	GCA_000378005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/005/GCA_000378005.1_ASM37800v1	-	DSM 11748
Hippea sp. KM1	944481	PRJNA179461	179461	Proteobacteria	delta/epsilon subdivisions	1.74231	42.8	-	JAFP01	1	1772	1700	1/14/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02584922	GCA_000526195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/195/GCA_000526195.1_ASM52619v1	-	KM1
Nitrincola sp. A-D6	1545442	PRJNA260813	260813	Proteobacteria	Gammaproteobacteria	3.79578	50	-	JRLB01	117	3815	2999	10/7/14	4/9/17	Contig	Universidad de Santiago de Chile	SAMN03076158	GCA_000764495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/495/GCA_000764495.1_Nitr1.0	25414492	A-D6
Sphingomonas sp. KC8	1030157	PRJNA319754	319754	Proteobacteria	Alphaproteobacteria	4.12301	63.7	chromosome:NZ_CP016306.1/CP016306.1	-	1	3944	3788	5/19/17	5/24/17	Complete Genome	Academia Sinica	SAMN04904200	GCA_002151445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/445/GCA_002151445.1_ASM215144v1	-	KC8
Xanthomonas oryzae pv. oryzae	64187	PRJNA284661	284661	Proteobacteria	Gammaproteobacteria	4.96674	63.7	chromosome:NZ_CP011532.1/CP011532.1	-	1	4851	3947	3/2/17	4/11/17	Complete Genome	Academia Sinica	SAMN03729481	GCA_002023005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/005/GCA_002023005.1_ASM202300v1	-	XF89b
Mycobacterium holsaticum	152142	PRJNA338014	338014	Terrabacteria group	Actinobacteria	5.74834	67	-	MIGZ01	353	5787	5204	9/9/16	4/17/17	Contig	UW	SAMN05729959	GCA_001722355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/355/GCA_001722355.1_ASM172235v1	-	M7
Microbacterium oxydans	82380	PRJNA270387	270387	Terrabacteria group	Actinobacteria	3.80777	68.3	-	JYIW01	26	3632	3536	3/19/15	4/10/17	Contig	Austrian Institute of Technology	SAMN03266142	GCA_000956525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/525/GCA_000956525.1_ASM95652v1	-	BEL4b
Acidipropionibacterium jensenii DSM 20535	1122997	PRJNA188883	188883	Terrabacteria group	Actinobacteria	3.02835	68.7	-	AUDD01	56	2737	2564	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441538	GCA_000425285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/285/GCA_000425285.1_ASM42528v1	-	DSM 20535
Tetragenococcus muriaticus DSM 15685	1123359	PRJNA185669	185669	Terrabacteria group	Firmicutes	2.08155	35.9	-	AUIQ01	109	2092	1858	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441160	GCA_000423785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/785/GCA_000423785.1_ASM42378v1	-	DSM 15685
Salmonella sp. HMSC13B08	1581094	PRJNA269863	269863	Proteobacteria	Gammaproteobacteria	4.82074	53.8	-	LUAG01	48	4690	4475	10/17/16	3/1/17	Scaffold	The Genome Institute at Washington University	SAMN03431277	GCA_001808015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/015/GCA_001808015.1_ASM180801v1	-	HMSC13B08
Proteus sp. HMSC10D02	1581079	PRJNA269848	269848	Proteobacteria	Gammaproteobacteria	5.94425	55.9	-	LTZY01	115	5697	5436	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03612240	GCA_001807845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/845/GCA_001807845.1_ASM180784v1	-	HMSC10D02
Haloferax lucentense DSM 14919	1230452	PRJNA174905	174905	Euryarchaeota	Halobacteria	3.61906	66.4	-	AOLH01	33	3660	3513	2/4/13	4/17/17	Contig	"University of California, Davis"	SAMN02471684	GCA_000336795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/795/GCA_000336795.1_ASM33679v1	25393412	DSM 14919
Lactobacillus rennini DSM 20253	1423796	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.26933	40.7	-	AYYI01	106	2251	2148	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02369383	GCA_001436505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/505/GCA_001436505.1_ASM143650v1	26415554	DSM 20253
Planobispora rosea	35762	PRJNA247410	247410	Terrabacteria group	Actinobacteria	8.69071	71.2	-	JPMW01	7	7795	7457	7/28/16	4/17/17	Scaffold	National Research Council (CNR) - Italy	SAMN02777124	GCA_001696485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/485/GCA_001696485.1_ASM169648v1	-	ATCC 53733
Vibrio cincinnatiensis DSM 19608	1123491	PRJEB19569	376372	Proteobacteria	Gammaproteobacteria	3.66583	43.7	-	FUXB01	57	3366	3220	3/4/17	3/11/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745782	GCA_900167345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/345/GCA_900167345.1_IMG-taxon_2568526007_annotated_assembly	-	DSM 19608
Sulfitobacter guttiformis KCTC 32187	1443111	PRJNA233444	233444	Proteobacteria	Alphaproteobacteria	3.97667	56.1	-	JASG01	4	3814	3702	4/8/14	4/17/17	Contig	Yonsei University	SAMN02721584	GCA_000622425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/425/GCA_000622425.1_32187_draft	-	KCTC 32187
Leptospira yanagawae serovar Saopaulo str. Sao Paulo = ATCC 700523	1249483	PRJNA178716	178716	Spirochaetes	Spirochaetia	4.05624	38.2	-	AOGX02	47	3894	3771	1/18/13	4/17/17	Contig	J. Craig Venter Institute	SAMN02436394	GCA_000332475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/475/GCA_000332475.2_gls454202v02	-	Sao Paulo
Candidatus Sulfuricurvum sp. RIFRC-1	1249480	PRJNA178975	178975	Proteobacteria	delta/epsilon subdivisions	2.36031	43.4123	chromosome:CP003920.1; plasmid unnamed:CP003921.1	-	2	2416	2359	11/7/12	6/8/15	Chromosome	Argonne National Laboratory	SAMN01162293	GCA_000310245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/245/GCA_000310245.1_ASM31024v1	-	-
Paenibacillus popilliae ATCC 14706	1212764	PRJDB192	179047	Terrabacteria group	Firmicutes	3.83372	51	-	BALG01	583	3791	3292	11/6/12	7/29/17	Contig	Kyushu University	SAMD00036628	GCA_000315235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/235/GCA_000315235.1_ASM31523v1	-	ATCC 14706
Xanthomonas oryzae pv. oryzae	64187	PRJNA304675	304675	Proteobacteria	Gammaproteobacteria	4.907	63.7	chromosome:NZ_CP013670.1/CP013670.1	-	1	4807	3914	9/26/16	4/11/17	Complete Genome	IRRI	SAMN04306145	GCA_001746595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/595/GCA_001746595.1_ASM174659v1	-	PXO71
Xanthomonas oryzae pv. oryzae	64187	PRJNA304675	304675	Proteobacteria	Gammaproteobacteria	5.03976	63.7	chromosome:NZ_CP013961.1/CP013961.1	-	1	4839	3852	9/26/16	8/8/17	Complete Genome	IRRI	SAMN04306146	GCA_001746615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/615/GCA_001746615.1_ASM174661v1	-	PXO145
Wheat blue dwarf phytoplasma	321961	PRJNA214439	214439	Terrabacteria group	Tenericutes	0.611462	27.1	-	AVAO01	6	588	471	11/1/13	4/17/17	Contig	Northwest A&F University	SAMN02470708	GCA_000495255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/255/GCA_000495255.1_WBD	24798075	-
Marinobacterium rhizophilum DSM 18822	1122202	PRJNA181367	181367	Proteobacteria	Gammaproteobacteria	5.36457	58.5	-	ARJM01	58	4743	4567	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440466	GCA_000378045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/045/GCA_000378045.1_ASM37804v1	-	DSM 18822
Porphyromonas gulae DSM 15663	1122972	PRJNA181368	181368	FCB group	Bacteroidetes/Chlorobi group	2.31539	48.6	-	ARJN01	63	2079	1895	4/22/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441674	GCA_000378065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/065/GCA_000378065.1_ASM37806v1	-	DSM 15663
Sandarakinorhabdus sp. AAP62	1248916	PRJNA178651	178651	Proteobacteria	Alphaproteobacteria	3.13154	65.5	-	ANFY01	22	2952	2871	1/9/13	4/8/17	Contig	"Institute of Microbiology, ASCR"	SAMN02470018	GCA_000331225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/225/GCA_000331225.1_SanAAP62ver1.0	23469335	AAP62
Desulfotomaculum hydrothermale Lam5 = DSM 18033	1121428	PRJEB578	179138	Terrabacteria group	Firmicutes	2.69503	49.5	-	CAOS01	16	2723	2566	11/6/12	4/10/17	Scaffold	Genoscope CEA	SAMEA2272113	GCA_000315365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/365/GCA_000315365.1_ASM31536v1	23405336	Lam5
Eubacterium ramulus ATCC 29099	1256908	PRJNA181041	181041	Terrabacteria group	Firmicutes	3.44714	42.6	-	AWVJ01	123	3173	2979	9/18/13	4/9/17	Scaffold	Washington University	SAMN02436882	GCA_000469345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/345/GCA_000469345.1_ASM46934v1	-	ATCC 29099
Prevotella loescheii DSM 19665 = JCM 12249 = ATCC 15930	1122985	PRJNA181369	181369	FCB group	Bacteroidetes/Chlorobi group	3.50859	46.6	-	ARJO01	31	2788	2624	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441341	GCA_000378085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/085/GCA_000378085.1_ASM37808v1	-	DSM 19665
Rubritalea marina DSM 17716	1123070	PRJNA181370	181370	PVC group	Verrucomicrobia	3.01327	51.6	-	ARJP01	30	2648	2572	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441342	GCA_000378105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/105/GCA_000378105.1_ASM37810v1	-	DSM 17716
Rudaea cellulosilytica DSM 22992	1123073	PRJNA181371	181371	Proteobacteria	Gammaproteobacteria	4.34364	63.7	-	ARJQ01	6	3741	3650	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441343	GCA_000378125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/125/GCA_000378125.1_ASM37812v1	-	DSM 22992
Saccharibacillus kuerlensis DSM 22868	1123226	PRJNA181372	181372	Terrabacteria group	Firmicutes	4.69956	50.7	-	ARJR01	56	4096	3950	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441675	GCA_000378145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/145/GCA_000378145.1_ASM37814v1	-	DSM 22868
Saccharibacter floricola DSM 15669	1123227	PRJNA181373	181373	Proteobacteria	Alphaproteobacteria	2.38407	51.2	-	ARJS01	43	2242	2133	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440467	GCA_000378165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/165/GCA_000378165.1_ASM37816v1	-	DSM 15669
Salinimonas chungwhensis DSM 16280	1123236	PRJNA181374	181374	Proteobacteria	Gammaproteobacteria	3.98544	47	-	ARJT01	30	3644	3523	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440468	GCA_000378185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/185/GCA_000378185.1_ASM37818v1	-	DSM 16280
Sediminispirochaeta bajacaliforniensis DSM 16054	1123274	PRJNA181375	181375	Spirochaetes	Spirochaetia	4.57661	49.2	-	ARJU01	75	4294	4162	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441006	GCA_000378205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/205/GCA_000378205.1_ASM37820v1	-	DSM 16054
Duganella zoogloeoides ATCC 25935	1261617	PRJNA181376	181376	Proteobacteria	Betaproteobacteria	6.27295	63.7	-	ARJV01	23	5449	5273	4/25/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441676	GCA_000383895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/895/GCA_000383895.1_ASM38389v1	-	ATCC 25935
Methylophilus methylotrophus DSM 46235 = ATCC 53528	1122236	PRJNA181379	181379	Proteobacteria	Betaproteobacteria	2.86022	49.6	-	ARJW01	14	2729	2647	4/22/13	6/20/17	Scaffold	DOE Joint Genome Institute	SAMN02440991	GCA_000378225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/225/GCA_000378225.1_ASM37822v1	-	ATCC 53528
Alcaligenes sp. EGD-AK7	1386079	PRJNA215169	215169	Proteobacteria	Betaproteobacteria	4.27645	56.6	-	AVOG02	69	3976	3867	9/11/13	4/11/17	Contig	National Environmental Engineering Research Institute	SAMN02470622	GCA_000465875.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/875/GCA_000465875.3_ASM46587v3	24407646	EGD-AK7
Cellulosimicrobium cellulans	1710	PRJNA313374	313374	Terrabacteria group	Actinobacteria	3.68565	74.3	-	LWGL01	354	3543	3127	9/9/16	4/13/17	Contig	King Abdullah University of Science and Technology (KAUST)	SAMN04520140	GCA_001722485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/485/GCA_001722485.1_ASM172248v1	-	JZ5
Xanthomonas oryzae pv. oryzae	64187	PRJNA304675	304675	Proteobacteria	Gammaproteobacteria	5.03335	63.7	chromosome:NZ_CP013674.1/CP013674.1	-	1	4872	3951	9/26/16	4/11/17	Complete Genome	IRRI	SAMN04306147	GCA_001746635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/635/GCA_001746635.1_ASM174663v1	-	PXO211
Xanthomonas oryzae pv. oryzae	64187	PRJNA304675	304675	Proteobacteria	Gammaproteobacteria	4.96872	63.7	chromosome:NZ_CP013675.1/CP013675.1	-	1	4799	3907	9/26/16	4/11/17	Complete Genome	IRRI	SAMN04306148	GCA_001746655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/655/GCA_001746655.1_ASM174665v1	-	PXO236
Cystobacter fuscus DSM 2262	1242864	PRJNA177202	177202	Proteobacteria	delta/epsilon subdivisions	12.2824	68.6	-	ANAH02	76	9978	9615	1/31/13	4/9/17	Contig	IMTECH-CSIR	SAMN02470006	GCA_000335475.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/475/GCA_000335475.2_ASM33547v2	-	DSM 2262
Rhodopirellula europaea 6C	1263867	PRJNA182223	182223	PVC group	Planctomycetes	7.19131	55.7	-	ANMO01	273	5923	5543	2/7/13	5/19/17	Contig	Microbial Interactions in MArine Systems (MIMAS)	SAMN02261079	GCA_000338295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/338/295/GCA_000338295.1_First	23273849	6C
Rhodopirellula sallentina SM41	1263870	PRJNA182226	182226	PVC group	Planctomycetes	8.18669	56.7	-	ANOH01	491	6267	5758	3/14/13	5/19/17	Contig	Microbial Interactions in MArine Systems (MIMAS)	SAMN02261081	GCA_000346505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/505/GCA_000346505.1_ASM34650v1	23273849	SM41
Endozoicomonas sp. S-B4-1U	1960125	PRJEB19464	383034	Proteobacteria	Gammaproteobacteria	5.46721	51.5	-	FWPT01	69	4823	4632	4/19/17	5/31/17	Contig	JLU GIESSEN	SAMEA103939778	GCA_900174585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/585/GCA_900174585.1_ASM90017458v1	-	-
Nosocomiicoccus sp. HMSC09A07	1581145	PRJNA269914	269914	Terrabacteria group	Firmicutes	1.62839	35.8	-	LWMX01	33	1654	1601	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436137	GCA_001808485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/485/GCA_001808485.1_ASM180848v1	-	HMSC09A07
Paenibacillus daejeonensis DSM 15491	1122917	PRJNA182395	182395	Terrabacteria group	Firmicutes	7.46406	53.3	-	ARKE01	36	6470	6308	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440993	GCA_000378385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/385/GCA_000378385.1_ASM37838v1	-	DSM 15491
Chitinimonas koreensis DSM 17726	1121278	PRJNA182398	182398	Proteobacteria	Betaproteobacteria	5.5861	68.8	-	ATZZ01	39	4582	4447	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440887	GCA_000428465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/465/GCA_000428465.1_ASM42846v1	-	DSM 17726
Cohnella laeviribosi DSM 21336	1121346	PRJNA182399	182399	Terrabacteria group	Firmicutes	4.47619	57.3	-	ARKG01	102	4254	4021	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441662	GCA_000378425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/425/GCA_000378425.1_ASM37842v1	-	DSM 21336
Deinococcus aquatilis DSM 23025	1121378	PRJNA182400	182400	Terrabacteria group	Deinococcus-Thermus	5.00329	62.1	-	ARKH01	113	4694	4430	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440995	GCA_000378445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/445/GCA_000378445.1_ASM37844v1	-	DSM 23025
Demetria terragena DSM 11295	1121385	PRJNA182401	182401	Terrabacteria group	Actinobacteria	3.57477	64.7	-	AQXW01	4	3430	3338	4/22/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440416	GCA_000376825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/825/GCA_000376825.1_ASM37682v1	-	DSM 11295
Chryseobacterium tenax DSM 16811	1121870	PRJNA182403	182403	FCB group	Bacteroidetes/Chlorobi group	3.62589	37.6	-	AUAA01	105	3436	3268	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440607	GCA_000428485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/485/GCA_000428485.1_ASM42848v1	-	DSM 16811
Flavobacterium rivuli WB 3.3-2 = DSM 21788	1121895	PRJNA182404	182404	FCB group	Bacteroidetes/Chlorobi group	4.48925	39.6	-	ARKJ01	23	4010	3901	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441333	GCA_000378485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/485/GCA_000378485.1_ASM37848v1	-	DSM 21788
Henriciella marina DSM 19595	1121949	PRJNA182389	182389	Proteobacteria	Alphaproteobacteria	3.27777	59.9	-	AQXT01	2	3201	3136	4/22/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441054	GCA_000376805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/805/GCA_000376805.1_ASM37680v1	-	DSM 19595
Hirschia maritima DSM 19733	551275	PRJNA182390	182390	Proteobacteria	Alphaproteobacteria	3.35127	44.6	-	ARKC01	10	3122	3050	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440469	GCA_000378345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/345/GCA_000378345.1_ASM37834v1	-	DSM 19733
Leeia oryzae DSM 17879	1122158	PRJNA182391	182391	Proteobacteria	Betaproteobacteria	3.78544	54.5	-	AQXU01	25	3504	3423	4/22/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441384	GCA_000376945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/945/GCA_000376945.1_ASM37694v1	-	DSM 17879
Megamonas rupellensis DSM 19944	1122217	PRJNA182392	182392	Terrabacteria group	Firmicutes	2.33005	31.3	-	ARKD01	70	2285	2120	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441331	GCA_000378365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/365/GCA_000378365.1_ASM37836v1	-	DSM 19944
Megasphaera cerevisiae DSM 20462	1122219	PRJNA285996	285996	Terrabacteria group	Firmicutes	3.23632	44.8	-	LEKT01	203	3126	2908	7/1/15	4/10/17	Contig	IEHINC	SAMN03763890	GCA_001045675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/675/GCA_001045675.1_ASM104567v1	26358606	DSM 20462
Halomonas lutea DSM 23508	1121943	PRJNA182407	182407	Proteobacteria	Gammaproteobacteria	4.53309	59.1	-	ARKK01	42	4265	4041	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440470	GCA_000378505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/505/GCA_000378505.1_ASM37850v1	-	DSM 23508
Hellea balneolensis DSM 19091	1121948	PRJNA182408	182408	Proteobacteria	Alphaproteobacteria	3.20882	48.4	-	AUAC01	10	3072	3002	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440888	GCA_000428525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/525/GCA_000428525.1_ASM42852v1	-	DSM 19091
Paenibacillus ginsengihumi DSM 21568	1122919	PRJNA182430	182430	Terrabacteria group	Firmicutes	5.67531	57.1	-	ARKW01	144	5203	4893	4/23/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440998	GCA_000380965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/965/GCA_000380965.1_ASM38096v1	-	DSM 21568
Patulibacter americanus DSM 16676	1122939	PRJNA182432	182432	Terrabacteria group	Actinobacteria	4.47056	74.4	-	ATUD01	32	4129	4003	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440564	GCA_000420025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/025/GCA_000420025.1_ASM42002v1	-	DSM 16676
Perlucidibaca piscinae DSM 21586	1122951	PRJNA182434	182434	Proteobacteria	Gammaproteobacteria	2.42407	64.9	-	ATUE01	13	2366	2284	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440565	GCA_000420045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/045/GCA_000420045.1_ASM42004v1	-	DSM 21586
Proteiniphilum acetatigenes DSM 18083	1123008	PRJNA182436	182436	FCB group	Bacteroidetes/Chlorobi group	4.77669	43.1	-	ARKZ01	37	3796	3655	4/23/13	6/12/17	Scaffold	DOE Joint Genome Institute	SAMN02440983	GCA_000380985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/985/GCA_000380985.1_ASM38098v1	-	DSM 18083
Hahella ganghwensis DSM 17046	1121935	PRJNA182405	182405	Proteobacteria	Gammaproteobacteria	6.56496	49.2	-	AQXX01	144	6094	5801	4/22/13	5/18/17	Contig	DOE Joint Genome Institute	SAMN02440417	GCA_000376785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/785/GCA_000376785.1_ASM37678v1	-	DSM 17046
Halomonas anticariensis FP35 = DSM 16096	1121939	PRJNA203692	203692	Proteobacteria	Gammaproteobacteria	5.07059	58.5	-	ASTJ01	21	4710	4541	6/10/13	4/8/17	Scaffold	UNIVERSITY OF GRANADA	SAMN02471787	GCA_000409775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/775/GCA_000409775.1_Han1.0	23868129	FP35
Psychroflexus tropicus DSM 15496	1123035	PRJNA182437	182437	FCB group	Bacteroidetes/Chlorobi group	3.00181	36.6	-	ARLA01	17	2782	2708	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440477	GCA_000378765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/765/GCA_000378765.1_ASM37876v1	-	DSM 15496
Selenomonas bovis DSM 23594	1123250	PRJNA182438	182438	Terrabacteria group	Firmicutes	2.68876	59.1	-	ARLB01	75	2569	2411	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440984	GCA_000381005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/005/GCA_000381005.1_ASM38100v1	-	DSM 23594
Streptococcus minor DSM 17118	1123309	PRJNA182441	182441	Terrabacteria group	Firmicutes	1.92789	41.1	-	AQYB01	33	1941	1855	4/22/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441724	GCA_000377005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/005/GCA_000377005.1_ASM37700v1	-	DSM 17118
Varibaculum cambriense DSM 15806	1123488	PRJNA182444	182444	Terrabacteria group	Actinobacteria	2.02294	53.4	-	ATUF01	10	1756	1676	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02440916	GCA_000420065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/065/GCA_000420065.1_ASM42006v1	-	DSM 15806
Streptococcus henryi DSM 19005	1123304	PRJNA182440	182440	Terrabacteria group	Firmicutes	2.42251	38.6	-	AQYA01	37	2327	2217	4/22/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441723	GCA_000376985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/985/GCA_000376985.1_ASM37698v1	-	DSM 19005
Propionispira raffinosivorans DSM 20765	1123511	PRJNA182445	182445	Terrabacteria group	Firmicutes	4.13438	38.1	-	ARLE01	60	3957	3772	4/23/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441335	GCA_000381065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/065/GCA_000381065.1_ASM38106v1	-	DSM 20765
Zooshikella ganghwensis DSM 15267	1123509	PRJNA182446	182446	Proteobacteria	Gammaproteobacteria	5.79866	41	-	AUAF01	414	5184	4754	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441217	GCA_000428585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/585/GCA_000428585.1_ASM42858v1	-	DSM 15267
Thiomicrorhabdus arctica DSM 13458	1123514	PRJNA182451	182451	Proteobacteria	Gammaproteobacteria	2.55288	41.9	-	ARLF01	6	2298	2234	4/23/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440985	GCA_000381085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/085/GCA_000381085.1_ASM38108v1	-	DSM 13458
Xanthomonas oryzae pv. oryzae	64187	PRJNA304675	304675	Proteobacteria	Gammaproteobacteria	4.962	63.7	chromosome:NZ_CP013676.1/CP013676.1	-	1	4872	3936	9/26/16	4/11/17	Complete Genome	IRRI	SAMN04306149	GCA_001746675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/675/GCA_001746675.1_ASM174667v1	-	PXO282
Natrinema pallidum DSM 3751	1227495	PRJNA174936	174936	Euryarchaeota	Halobacteria	3.91581	63.7	-	AOII01	115	3888	3593	2/4/13	4/17/17	Contig	"University of California, Davis"	SAMN02471671	GCA_000337615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/615/GCA_000337615.1_ASM33761v1	25393412	DSM 3751
Succinimonas amylolytica DSM 2873	1265507	PRJNA182396	182396	Proteobacteria	Gammaproteobacteria	3.96427	48.1	-	ARKF01	23	3124	2922	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440994	GCA_000378405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/405/GCA_000378405.1_ASM37840v1	-	DSM 2873
Colwellia piezophila ATCC BAA-637	1265503	PRJNA182419	182419	Proteobacteria	Gammaproteobacteria	5.48438	38.9	-	ARKQ01	38	4557	4377	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440473	GCA_000378625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/625/GCA_000378625.1_ASM37862v1	-	ATCC BAA-637
Desulfospira joergensenii DSM 10085	1265505	PRJNA182447	182447	Proteobacteria	delta/epsilon subdivisions	6.11947	50.6	-	ATUG01	6	5599	5490	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440566	GCA_000420085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/085/GCA_000420085.1_ASM42008v1	-	DSM 10085
Caldimonas manganoxidans ATCC BAA-369	1265502	PRJNA182454	182454	Proteobacteria	Betaproteobacteria	3.53212	66	-	ARLH01	89	3400	3222	4/23/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440480	GCA_000381125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/125/GCA_000381125.1_ASM38112v1	-	ATCC BAA-369
Curvibacter lanceolatus ATCC 14669	1265504	PRJNA182463	182463	Proteobacteria	Betaproteobacteria	6.83252	65.5	-	ARLO01	72	6267	6061	4/23/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440482	GCA_000381265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/265/GCA_000381265.1_ASM38126v1	-	ATCC 14669
Pseudohaliea rubra DSM 19751	1265313	PRJNA182510	182510	Proteobacteria	Gammaproteobacteria	3.2123	66.1	-	AUVB01	86	2918	2782	9/24/14	4/17/17	Scaffold	Leibniz Institute DSMZ Braunschweig	SAMN03076238	GCA_000764025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/025/GCA_000764025.1_ASM76402v1	25414506	DSM 19751
Desulfovibrio desulfuricans subsp. desulfuricans DSM 642	1121445	PRJNA185532	185532	Proteobacteria	delta/epsilon subdivisions	3.39168	57.4	-	ATUZ01	20	2926	2833	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02440572	GCA_000420465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/465/GCA_000420465.1_ASM42046v1	-	DSM 642
Mycobacterium arosiense ATCC BAA-1401 = DSM 45069	1265311	PRJNA354248	354248	Terrabacteria group	Actinobacteria	5.98021	66.8	-	MVHG01	465	5635	5251	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064229	GCA_002086125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/125/GCA_002086125.1_ASM208612v1	-	DSM 45069
Chamaesiphon minutus PCC 6605	1173020	PRJNA158825	158825	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.76176	45.6454	chromosome:NC_019697.1/CP003600.1; plasmid pCHA6605.01:NC_020053.1/CP003601.1; plasmid pCHA6605.02:NC_019698.1/CP003602.1	-	3	6315	6013	12/5/12	5/28/17	Chromosome	JGI	SAMN02261345	GCA_000317145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/145/GCA_000317145.1_ASM31714v1	-	PCC 6605
Deinococcus apachensis DSM 19763	1121377	PRJNA183018	183018	Terrabacteria group	Deinococcus-Thermus	4.45264	68.7	-	ARLS01	52	4300	4123	4/23/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441322	GCA_000381345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/345/GCA_000381345.1_ASM38134v1	-	DSM 19763
Rhodonellum psychrophilum GCM71 = DSM 17998	1123057	PRJNA183058	183058	FCB group	Bacteroidetes/Chlorobi group	5.1937	41.8	-	ARMB01	51	4417	4304	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441658	GCA_000381545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/545/GCA_000381545.1_ASM38154v1	-	DSM 17998
Azoarcus toluclasticus ATCC 700605	1261621	PRJNA181380	181380	Proteobacteria	Betaproteobacteria	5.92598	66	-	ARJX01	47	5455	5290	4/22/13	6/20/17	Scaffold	DOE Joint Genome Institute	SAMN02441344	GCA_000378245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/245/GCA_000378245.1_ASM37824v1	-	MF63
Nafulsella turpanensis ZLM-10	1124780	PRJNA182711	182711	FCB group	Bacteroidetes/Chlorobi group	4.80559	45.7	-	ANNU01	109	4180	4076	3/14/13	5/19/17	Contig	Northwest A&F University	SAMN01823367	GCA_000346615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/615/GCA_000346615.1_NafTru1.0	24699960	ZLM-10
Rhodopirellula maiorica SM1	1265738	PRJNA182719	182719	PVC group	Planctomycetes	8.87408	54.7	-	ANOG01	1132	7208	6286	3/12/13	5/19/17	Contig	Microbial Interactions in MArine Systems (MIMAS)	SAMN02261082	GCA_000346295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/295/GCA_000346295.1_ASM34629v1	23273849	SM1
Mycobacterium asiaticum DSM 44297	1265310	PRJEB5743	240182	Terrabacteria group	Actinobacteria	5.93893	66.2	-	CCBD01	10	5539	5187	3/25/14	4/2/17	Scaffold	URMITE	SAMEA3138999	GCA_000613245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/245/GCA_000613245.1_PRJEB5743_assembly_1	24744338	DSM 44297
Xanthomonas oryzae pv. oryzae	64187	PRJNA304675	304675	Proteobacteria	Gammaproteobacteria	4.9543	63.7	chromosome:NZ_CP013677.1/CP013677.1	-	1	4851	3960	9/26/16	4/11/17	Complete Genome	IRRI	SAMN04306150	GCA_001746695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/695/GCA_001746695.1_ASM174669v1	-	PXO524
Xanthomonas oryzae pv. oryzae	64187	PRJNA304675	304675	Proteobacteria	Gammaproteobacteria	4.93631	63.7	chromosome:NZ_CP013678.1/CP013678.1	-	1	4840	3933	9/26/16	4/11/17	Complete Genome	IRRI	SAMN04306151	GCA_001746715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/715/GCA_001746715.1_ASM174671v1	-	PXO563
Xanthomonas oryzae pv. oryzae	64187	PRJNA304675	304675	Proteobacteria	Gammaproteobacteria	4.95179	63.7	chromosome:NZ_CP013679.1/CP013679.1	-	1	4832	3932	9/26/16	4/11/17	Complete Genome	IRRI	SAMN04306152	GCA_001746735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/735/GCA_001746735.1_ASM174673v1	-	PXO602
Xanthomonas oryzae pv. oryzae	64187	PRJNA298633	298633	Proteobacteria	Gammaproteobacteria	5.02543	63.7	chromosome:NZ_CP012947.1/CP012947.1	-	1	4854	3953	1/20/16	4/11/17	Complete Genome	Martin Luther University Halle-Wittenberg	SAMN04161335	GCA_001518895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/895/GCA_001518895.1_ASM151889v1	26876161	PXO83
Xanthomonas oryzae pv. oryzae PXO86	1458476	PRJNA237250	237250	Proteobacteria	Gammaproteobacteria	5.01662	63.7	chromosome:NZ_CP007166.1/CP007166.1	-	1	4847	3950	3/5/15	4/11/17	Complete Genome	Cornell University	SAMN02616002	GCA_000948075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/075/GCA_000948075.1_ASM94807v1	27148456	PXO86
Bradyrhizobium japonicum	375	PRJNA270102	270102	Proteobacteria	Alphaproteobacteria	9.22421	63.7	chromosome:NZ_CP010313.1/CP010313.1	-	1	8741	8404	12/23/14	4/3/17	Complete Genome	INDEAR	SAMN03262953	GCA_000807315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/315/GCA_000807315.1_ASM80731v1	25700406	E109
Acinetobacter tandoii DSM 14970 = CIP 107469	1120927	PRJNA183270	183270	Proteobacteria	Gammaproteobacteria	4.07892	40.1	-	AQFM01	28	3982	3755	5/20/13	4/6/17	Scaffold	Broad Institute	SAMN01087852	GCA_000400735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/735/GCA_000400735.1_Acin_tand_CIP_107469_V1	-	CIP 107469
Acinetobacter beijerinckii CIP 110307	1217648	PRJNA183271	183271	Proteobacteria	Gammaproteobacteria	3.56333	38.3	-	APQL01	5	3397	3252	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01087842	GCA_000369005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/005/GCA_000369005.1_Acin_beij_CIP_110307_V1	-	CIP 110307
Acinetobacter rudis	632955	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.96179	39	-	BBRX01	151	3681	3463	1/21/15	4/6/17	Contig	National Institute of Technology and Evaluation	SAMD00019984	GCA_000829675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/675/GCA_000829675.1_ASM82967v1	-	DSM 24031
Acinetobacter towneri DSM 14962 = CIP 107472	1120929	PRJNA183285	183285	Proteobacteria	Gammaproteobacteria	2.95235	41.3	-	APPY01	42	2831	2648	4/16/13	4/10/17	Scaffold	Broad Institute	SAMN01087853	GCA_000368785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/785/GCA_000368785.1_Acin_town_CIP_107472_V1	-	CIP 107472
Bradyrhizobium japonicum USDA 6	1037409	PRJDA67463	67463	Proteobacteria	Alphaproteobacteria	9.20738	63.7	chromosome:NC_017249.1/AP012206.1	-	1	8743	8327	11/1/11	3/30/17	Complete Genome	Kyoto Sangyo University	SAMD00060992	GCA_000284375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/375/GCA_000284375.1_ASM28437v1	24710291	USDA 6
Acinetobacter brisouii CIP 110357	1341683	PRJNA217359	217359	Proteobacteria	Gammaproteobacteria	3.14851	41.7	-	AYEU01	7	3029	2879	10/29/13	4/6/17	Scaffold	Broad Institute	SAMN02335354	GCA_000488275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/275/GCA_000488275.1_Acin_bris_CIP110357_V2	-	CIP 110357
Acinetobacter indicus CIP 110367	1341679	PRJNA217357	217357	Proteobacteria	Gammaproteobacteria	3.21164	45.4	-	AYET01	17	3091	2866	10/29/13	4/6/17	Scaffold	Broad Institute	SAMN02335352	GCA_000488255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/255/GCA_000488255.1_Acin_indi_CIP110367_V2	-	CIP 110367
Acinetobacter gyllenbergii NIPH 230	1217658	PRJNA183325	183325	Proteobacteria	Gammaproteobacteria	4.55135	41	-	AYEQ01	13	4387	4054	10/29/13	4/6/17	Scaffold	Broad Institute	SAMN01828185	GCA_000488195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/195/GCA_000488195.1_Acin_gyll_NIPH_230_V1	-	NIPH 230
Litoreibacter arenae DSM 19593	1123360	PRJNA178144	178144	Proteobacteria	Alphaproteobacteria	3.68276	60.3	-	AONI01	14	3606	3504	7/31/13	4/16/17	Scaffold	Roseobacter SFB	SAMN02469745	GCA_000442275.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/275/GCA_000442275.2_Thalar	-	DSM 19593
Xanthomonas oryzae pv. oryzae MAFF 311018	342109	PRJNA16297	16297	Proteobacteria	Gammaproteobacteria	4.94022	63.7	chromosome:NC_007705.1/AP008229.1	-	1	4852	3940	1/5/06	4/11/17	Complete Genome	National Institute of Agrobiological Sciences	SAMD00061078	GCA_000010025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/025/GCA_000010025.1_ASM1002v1	-	MAFF 311018
Xanthomonas oryzae pv. oryzae KACC 10331	291331	PRJNA12931	12931	Proteobacteria	Gammaproteobacteria	4.94144	63.7	chromosome:AE013598.1	-	1	4697	4538	2/2/05	1/31/14	Complete Genome	"NIAB, Rural Development Administration"	SAMN02603680	GCA_000007385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/385/GCA_000007385.1_ASM738v1	-	KACC10331
Salinivibrio costicola subsp. costicola ATCC 33508 = LMG 11651	1269942	PRJNA196485	196485	Proteobacteria	Gammaproteobacteria	3.37963	49.3	-	AQOF01	202	3321	2341	1/7/14	4/9/17	Contig	Universidade Federal do Rio de Janeiro	SAMN02597457	GCA_000565345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/345/GCA_000565345.1_costicolaLMG11651	-	LMG 11651
Ralstonia insidiosa	190721	PRJNA288137	288137	Proteobacteria	Betaproteobacteria	5.98776	63.6454	chromosome 1:NZ_CP012605.1/CP012605.1; chromosome 2:NZ_CP012606.1/CP012606.1; plasmid unnamed:NZ_CP012607.1/CP012607.1	-	3	5639	5365	6/1/16	4/12/17	Complete Genome	Environmental microbiology and food safety lab	SAMN03795175	GCA_001653935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/935/GCA_001653935.1_ASM165393v1	-	FC1138
Acinetobacter guillouiae NIPH 991	1217656	PRJNA183302	183302	Proteobacteria	Gammaproteobacteria	4.90577	38.2	-	APPJ01	4	4584	4405	4/16/13	5/18/17	Scaffold	Broad Institute	SAMN01087917	GCA_000368485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/485/GCA_000368485.1_Acin_guil_NIPH_991_V1	-	NIPH 991
Aeromonas molluscorum 848	1268236	PRJNA183610	183610	Proteobacteria	Gammaproteobacteria	4.23617	59.2	-	AQGQ01	309	4057	3596	5/3/13	4/17/17	Contig	Universitat de Barcelona	SAMN02471397	GCA_000388115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/115/GCA_000388115.1_Amol1.0	23788549	848
Aeromonas diversa CDC 2478-85	1268237	PRJNA183611	183611	Proteobacteria	Gammaproteobacteria	4.02642	61.7	-	APVG01	104	3837	3578	4/19/13	4/8/17	Contig	University of Barcelona	SAMN02471398	GCA_000367845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/845/GCA_000367845.1_Adiv1.0	23792745	2478-85
Xanthomonas hortorum	56454	PRJNA280982	280982	Proteobacteria	Gammaproteobacteria	5.2509	63.6409	chromosome:NZ_CP016878.1/CP016878.1; plasmid pB07007:NZ_CP016879.1/CP016879.1	-	2	4721	4297	9/5/17	9/7/17	Complete Genome	Agriculture and Agri-Food Canada	SAMN03481245	GCA_002285515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/515/GCA_002285515.1_ASM228551v1	-	B07-007
Acinetobacter gerneri DSM 14967 = CIP 107464	1120926	PRJNA183298	183298	Proteobacteria	Gammaproteobacteria	4.59517	37.9	-	APPN01	42	4305	4097	4/16/13	5/18/17	Scaffold	Broad Institute	SAMN01087849	GCA_000368565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/565/GCA_000368565.1_Acin_gern_CIP_107464_V1	-	CIP 107464
Ralstonia pickettii 12J	402626	PRJNA17631	17631	Proteobacteria	Betaproteobacteria	5.32573	63.6234	chromosome 1:NC_010682.1/CP001068.1; chromosome 2:NC_010678.1/CP001069.1; plasmid pRPIC01:NC_010683.1/CP001070.1	-	3	5073	4886	5/7/08	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598396	GCA_000020205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/205/GCA_000020205.1_ASM2020v1	-	12J
Halodesulfurarchaeum formicicum	1873524	PRJNA328078	328078	Euryarchaeota	Halobacteria	2.08595	63.6	chromosome:NZ_CP016804.1/CP016804.1	-	1	2146	2078	11/28/16	9/4/17	Complete Genome	Immanuel Kant Baltic Federal University	SAMN05363636	GCA_001886955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/955/GCA_001886955.1_ASM188695v1	28106880	HSR6
Morganella psychrotolerans	368603	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.14518	48.1	-	LZEW01	35	3930	3454	6/24/16	4/13/17	Contig	FDA/CFSAN	SAMN04507556	GCA_001676155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/155/GCA_001676155.1_ASM167615v1	-	GCSL-P101
Gulosibacter sp. 10	1255570	PRJEB19170	374437	Terrabacteria group	Actinobacteria	3.65199	70.7	-	FUIC01	55	3336	3213	2/11/17	5/31/17	Contig	MICALIS	SAMEA80392918	GCA_900163695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/695/GCA_900163695.1_ASM90016369v1	-	10(10)
Exiguobacterium acetylicum DSM 20416	1397697	PRJNA218046	218046	Terrabacteria group	Firmicutes	3.27711	47	-	JNIR01	3	3391	3180	6/11/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02841153	GCA_000702605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/605/GCA_000702605.1_ASM70260v1	25323723	DSM 20416
Hafnia paralvei	546367	PRJNA254477	254477	Proteobacteria	Gammaproteobacteria	4.99822	47.9	-	JWGZ01	47	4686	4468	12/29/14	4/10/17	Contig	Canadian Food Inspection Agency	SAMN02902609	GCA_000807895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/895/GCA_000807895.1_ASM80789v1	25700416	GTA-HAF03
Vibrio casei	673372	PRJDB5783	391150	Proteobacteria	Gammaproteobacteria	3.77348	40.6	-	BDSD01	55	3541	3330	6/16/17	7/15/17	Contig	"Laboratory of Microbiology, Division of Marine Life Science, Faculty of Fisheries Sciences, Hokkaido University"	SAMD00080446	GCA_002218025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/025/GCA_002218025.1_ASM221802v1	28662104	DSM 22364
Janthinobacterium sp. 1_2014MBL_MicDiv	1644131	PRJNA281768	281768	Proteobacteria	Betaproteobacteria	6.45354	63.6	chromosome:NZ_CP011319.1/CP011319.1	-	1	5648	5479	11/3/16	4/13/17	Complete Genome	UC Davis	SAMN03496288	GCA_001865675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/675/GCA_001865675.1_ASM186567v1	-	1_2014MBL_MicDiv
Agrococcus casei LMG 22410	1255656	PRJEB19012	374420	Terrabacteria group	Actinobacteria	2.78732	65.3	-	FUHU01	48	2772	2644	2/11/17	5/31/17	Contig	MICALIS	SAMEA80359168	GCA_900163565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/565/GCA_900163565.1_ASM90016356v1	-	LMG 22410
Bradyrhizobium sp. CCGE-LA001	1223566	PRJNA172908	172908	Proteobacteria	Alphaproteobacteria	7.8335	63.6	chromosome:NZ_CP013949.1/CP013949.1	-	1	7234	6988	1/25/16	4/16/17	Complete Genome	Center for Genomic Sciences	SAMN02469422	GCA_000296215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/215/GCA_000296215.2_ASM29621v2	"2,495,231,826,988,040"	CCGE-LA001
Luteococcus japonicus LSP_Lj1	1255658	PRJEB19172	374439	Terrabacteria group	Actinobacteria	3.39446	67.9	-	FUKQ01	64	3268	3085	2/11/17	8/21/17	Contig	MICALIS	SAMEA81150418	GCA_900163845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/845/GCA_900163845.1_Luteococcus_japonicus_LSP_Lj1	-	LSP_Lj1
Bavariicoccus seileri DSM 19936	1121105	PRJNA188834	188834	Terrabacteria group	Firmicutes	2.24244	38.2	-	ATXL01	109	2113	1970	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440893	GCA_000421665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/665/GCA_000421665.1_ASM42166v1	-	DSM 19936
Leucobacter sp. UCD-THU	1292023	PRJNA188734	188734	Terrabacteria group	Actinobacteria	3.31727	70.3	-	APJM01	11	3014	2908	3/28/13	4/8/17	Scaffold	UC Davis	SAMN02471295	GCA_000349545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/545/GCA_000349545.1_Leucobacter_sp._str._UCD-THU	23792744	UCD-THU
Leucobacter komagatae	55969	PRJNA271378	271378	Terrabacteria group	Actinobacteria	3.66936	65.3	-	JXSQ01	62	3345	3158	2/9/15	4/17/17	Contig	Kingston University	SAMN03274192	GCA_000834055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/055/GCA_000834055.1_ASM83405v1	-	VKM ST2845
Proteus hauseri ZMd44	1312367	PRJNA195421	195421	Proteobacteria	Gammaproteobacteria	3.87593	38.1	-	AWXP01	51	3521	3382	11/20/13	4/9/17	Contig	Xiamen University	SAMN02472132	GCA_000497855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/855/GCA_000497855.1_version_3_of_Proteus_hauseri_genome	24435854	ZMd44
Marinilactibacillus psychrotolerans	191770	PRJEB15747	347680	Terrabacteria group	Firmicutes	2.50858	34.7	-	FMZD01	47	2418	2334	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488013	GCA_900101525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/525/GCA_900101525.1_IMG-taxon_2619619009_annotated_assembly	-	DSM 19582
Acidipropionibacterium thoenii DSM 20276	1122998	PRJNA185646	185646	Terrabacteria group	Actinobacteria	2.93807	68	-	AUHZ01	45	2675	2488	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440839	GCA_000423445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/445/GCA_000423445.1_ASM42344v1	-	DSM 20276
Vibrio litoralis DSM 17657	1123493	PRJNA195825	195825	Proteobacteria	Gammaproteobacteria	3.82388	41.9	-	AUFZ01	20	3488	3367	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440646	GCA_000426765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/765/GCA_000426765.1_ASM42676v1	-	DSM 17657
Vagococcus fluvialis bH819	1255619	PRJEB19180	384733	Terrabacteria group	Firmicutes	2.95099	32.8	-	FWFD01	22	2865	2780	4/28/17	5/31/17	Contig	MICALIS	SAMEA81165418	GCA_900163795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/795/GCA_900163795.1_ASM90016379v1	-	bH819
Microbacterium foliorum	104336	PRJNA269724	269724	Terrabacteria group	Actinobacteria	3.55832	68.7	-	JYIU01	46	3363	3267	3/19/15	4/10/17	Contig	Austrian Institute of Technology	SAMN03256325	GCA_000956415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/415/GCA_000956415.1_ASM95641v1	-	DSM 12966
Brochothrix thermosphacta DSM 20171 = FSL F6-1036	1121126	PRJNA221000	221000	Terrabacteria group	Firmicutes	2.50312	36.3	-	JHZM01	29	2445	2325	4/8/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02743972	GCA_000620985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/985/GCA_000620985.1_ASM62098v1	-	DSM 20171
Ottowia sp. oral taxon 894	1658672	PRJNA282954	282954	Proteobacteria	Betaproteobacteria	2.92578	63.6	chromosome:NZ_CP012073.1/CP012073.1	-	1	2624	2494	8/6/15	4/10/17	Complete Genome	The Forsyth Institute	SAMN03704033	GCA_001262075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/075/GCA_001262075.1_ASM126207v1	-	W10237
Microbacterium gubbeenense DSM 15944	1122237	PRJNA185602	185602	Terrabacteria group	Actinobacteria	3.01792	68.1	-	AUGQ01	74	2892	2711	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440649	GCA_000422745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/745/GCA_000422745.1_ASM42274v1	-	DSM 15944
Bacillus galactosidilyticus	217031	PRJNA284351	284351	Terrabacteria group	Firmicutes	4.84199	37.6	-	LDJR01	62	4488	4211	5/17/16	4/12/17	Scaffold	Institute of Life Sciences and Technology	SAMN03701610	GCA_001645705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/705/GCA_001645705.1_ASM164570v1	-	G25-74
Providencia heimbachae	333962	PRJEB12672	311297	Proteobacteria	Gammaproteobacteria	4.22061	40.3	-	FIZD01	8	3917	3770	2/12/16	4/12/17	Contig	URMITE	SAMEA3867205	GCA_900061445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/445/GCA_900061445.1_Providencia_heimbachae	-	P12672
Kocuria varians	1272	PRJNA396487	396487	Terrabacteria group	Actinobacteria	2.82297	70.5	-	NPGE01	2	2446	2268	8/14/17	8/16/17	Contig	The Gorbatov's All-Russian Meat Research Institute (VNIIMP)	SAMN07427085	GCA_002250745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/745/GCA_002250745.1_ASM225074v1	-	80
Brevibacillus parabrevis	54914	PRJNA308149	308149	Terrabacteria group	Firmicutes	5.65191	51.5	-	LQQV01	136	5313	5061	4/13/16	4/17/17	Contig	University of Malaya	SAMN04387678	GCA_001619605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/605/GCA_001619605.1_ASM161960v1	-	CN1
Pediococcus parvulus	54062	PRJNA320830	320830	Terrabacteria group	Firmicutes	2.23675	38.5	-	LXND01	115	2257	2095	5/9/16	4/17/17	Contig	Consiglio per la ricerca in agricoltura e l'analisi dell'economia agraria (CREA)	SAMN04958102	GCA_001640785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/785/GCA_001640785.1_ASM164078v1	-	2.6
Lactococcus plantarum NBRC 100936	1348632	PRJDB1323	231380	Terrabacteria group	Firmicutes	1.97776	36.7	-	BCVM01	46	1883	1824	2/27/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046919	GCA_001591745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/745/GCA_001591745.1_ASM159174v1	-	NBRC 100936
Coriobacteriaceae bacterium 68-1-3	1531429	PRJNA257396	257396	Terrabacteria group	Actinobacteria	1.96709	63.6	chromosome:NZ_CP009302.1/CP009302.1	-	1	1718	1642	1/6/15	4/10/17	Complete Genome	USDA	SAMN02951405	GCA_000814825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/825/GCA_000814825.1_ASM81482v1	26450725	68-1-3
Brachybacterium nesterenkovii	47847	PRJEB19168	384737	Terrabacteria group	Actinobacteria	3.02197	72.4	-	FWFG01	119	2710	2520	4/28/17	5/31/17	Contig	MICALIS	SAMEA80386918	GCA_900163655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/655/GCA_900163655.1_ASM90016365v1	-	CIP104813
Chryseobacterium shigense	297244	PRJEB18816	360797	FCB group	Bacteroidetes/Chlorobi group	4.89592	37.5	-	FTNY01	20	4433	4307	1/14/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421639	GCA_900156575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/575/GCA_900156575.1_IMG-taxon_2681813504_annotated_assembly	-	DSM 17126
Pseudomonas lundensis	86185	PRJNA274345	274345	Proteobacteria	Gammaproteobacteria	4.9925	58.5	-	JYKY01	92	4665	4428	6/30/15	6/26/17	Contig	"Zentralinstitut fuer Ernaehrungs- und Lebensmittelforschung (ZIEL), WZW, TUM"	SAMN03328794	GCA_001042985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/985/GCA_001042985.1_G8686	26675012	DSM 6252
Halomonas elongata DSM 2581	768066	PRJEA49333	49333	Proteobacteria	Gammaproteobacteria	4.0613	63.6	chromosome:FN869568.1	-	1	3556	3472	9/17/10	2/27/15	Complete Genome	Max-Planck-Institute of Biochemistry	SAMEA2272784	GCA_000196875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/875/GCA_000196875.1_ASM19687v1	-	type strain: DSM 2581
Paeniglutamicibacter gangotriensis Lz1y	1276920	PRJNA185041	185041	Terrabacteria group	Actinobacteria	4.3199	63	-	AOCK01	20	3978	3820	3/25/13	5/18/17	Contig	Centre for Cellular and Molecular Biology	SAMN02469439	GCA_000348945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/945/GCA_000348945.1_ArGa1	23766407	Lz1y
Xanthomonas oryzae pv. oryzae PXO99A	360094	PRJNA28127	28127	Proteobacteria	Gammaproteobacteria	5.23855	63.6	chromosome:NC_010717.2/CP000967.2	-	1	5082	4140	5/16/08	4/11/17	Complete Genome	Center for Bioinformatics and Computational Biology	SAMN02603061	GCA_000019585.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/585/GCA_000019585.2_ASM1958v2	"1,845,260,827,148,450"	PXO99A
Methylococcus capsulatus str. Bath	243233	PRJNA21	21	Proteobacteria	Gammaproteobacteria	3.30456	63.6	chromosome:NC_002977.6/AE017282.2	-	1	3078	2957	6/25/01	4/6/17	Complete Genome	TIGR	SAMN02603968	GCA_000008325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/325/GCA_000008325.1_ASM832v1	15383840	Bath
Jeotgalicoccus psychrophilus DSM 19085	1122129	PRJNA188918	188918	Terrabacteria group	Firmicutes	2.34568	40.2	-	AUEF01	28	2426	2308	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441182	GCA_000425845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/845/GCA_000425845.1_ASM42584v1	-	DSM 19085
Chryseobacterium joostei	112234	PRJEB18817	360798	FCB group	Bacteroidetes/Chlorobi group	5.26804	35.4	-	FTNZ01	22	4795	4681	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421768	GCA_900156585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/585/GCA_900156585.1_IMG-taxon_2681813505_annotated_assembly	-	DSM 16927
Vagococcus lutrae LBD1	1408226	PRJNA222533	222533	Terrabacteria group	Firmicutes	1.82904	37.7	-	AYSH01	20	1777	1710	11/21/13	4/17/17	Scaffold	Broad Institute	SAMN02597028	GCA_000498295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/295/GCA_000498295.1_Vagococcus_lutrae	24371201	LBD1
Chryseobacterium bovis DSM 19482	1121284	PRJEB16692	350467	FCB group	Bacteroidetes/Chlorobi group	3.34605	38.2	-	FTPU01	96	3248	3052	1/19/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660493	GCA_900108115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/115/GCA_900108115.1_IMG-taxon_2595699003_annotated_assembly	-	DSM 19482
Acidovorax sp. P4	1662458	PRJNA285679	285679	Proteobacteria	Betaproteobacteria	4.70474	63.5773	chromosome:NZ_CP021366.1/CP021366.1; plasmid pACP4.1:NZ_CP021367.1/CP021367.1; plasmid pACP4.2:NZ_CP021368.1/CP021368.1; plasmid pACP4.3:NZ_CP021369.1/CP021369.1; plasmid pACP4.4:NZ_CP021370.1/CP021370.1	-	5	4400	4176	5/24/17	5/26/17	Complete Genome	University of North Carolina - Chapel Hill	SAMN03755634	GCA_002157125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/125/GCA_002157125.1_ASM215712v1	-	P4
Mycetocola reblochoni REB411	1255698	PRJEB19178	374435	Terrabacteria group	Actinobacteria	2.90978	70.6	-	FUKR01	80	2685	2554	2/11/17	5/31/17	Contig	MICALIS	SAMEA81154168	GCA_900163835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/835/GCA_900163835.1_ASM90016383v1	-	EB411
Pandoraea vervacti	656178	PRJNA275368	275368	Proteobacteria	Betaproteobacteria	5.73628	63.5703	chromosome:NZ_CP010897.2/CP010897.2; plasmid pPV15:NZ_CP010898.2/CP010898.2	-	2	4993	4805	2/25/15	4/17/17	Complete Genome	University of Malaya	SAMN03342424	GCA_000934605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/605/GCA_000934605.2_ASM93460v2	-	NS15
Bradyrhizobium diazoefficiens	1355477	PRJDB3027	266391	Proteobacteria	Alphaproteobacteria	10.4752	63.5453	chromosome Unknown:NZ_AP014685.1/AP014685.1; plasmid pNK6a:NZ_AP014659.1/AP014659.1; plasmid pNK6b:NZ_AP014686.1/AP014686.1; plasmid pNK6c:NZ_AP014687.1/AP014687.1; plasmid pNK6d:NZ_AP014688.1/AP014688.1	-	5	10249	8598	4/11/15	4/11/17	Complete Genome	Tohoku University	SAMD00022775	GCA_001549695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/695/GCA_001549695.1_ASM154969v1	25862225	NK6
Cupriavidus metallidurans CH34	266264	PRJNA250	250	Proteobacteria	Betaproteobacteria	6.91335	63.5184	chromosome:NC_007973.1/CP000352.1; plasmid megaplasmid:NC_007974.2/CP000353.2; plasmid pMOL28:NC_007972.2/CP000355.2; plasmid pMOL30:NC_007971.2/CP000354.2	-	4	6517	6316	4/26/06	5/18/17	Complete Genome	DOE Joint Genome Institute	SAMN02598450	GCA_000196015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/015/GCA_000196015.1_ASM19601v1	-	CH34
Xanthomonas gardneri	90270	PRJNA344031	344031	Proteobacteria	Gammaproteobacteria	5.4162	63.5035	chromosome:NZ_CP018728.1/CP018728.1; plasmid pJS749-3.1:NZ_CP018729.1/CP018729.1; plasmid pJS749-3.2:NZ_CP018730.1/CP018730.1	-	3	4841	4463	12/19/16	4/6/17	Complete Genome	cirad	SAMN05823149	GCA_001908755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/755/GCA_001908755.1_ASM190875v1	-	JS749-3
Altererythrobacter sp. C9-11	1982042	PRJNA398148	398148	Proteobacteria	Alphaproteobacteria	2.70285	63.5	chromosome:NZ_CP022889.1/CP022889.1	-	1	2631	2561	8/24/17	8/27/17	Complete Genome	Xiamen University	SAMN07502071	GCA_002269345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/345/GCA_002269345.1_ASM226934v1	-	C9-11
Rhodoplanes sp. Z2-YC6860	674703	PRJNA238489	238489	Proteobacteria	Alphaproteobacteria	8.19389	63.5	chromosome:NZ_CP007440.1/CP007440.1	-	1	7654	7518	3/3/16	4/17/17	Complete Genome	Seoul National University	SAMN04521129	GCA_001579845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/845/GCA_001579845.1_ASM157984v1	-	YC6860
Pseudodesulfovibrio indicus	1716143	PRJNA309781	309781	Proteobacteria	delta/epsilon subdivisions	3.96657	63.5	chromosome:NZ_CP014206.1/CP014206.1	-	1	3650	3476	2/18/16	3/2/17	Complete Genome	Universite de Bretagne Occidentale	SAMN04440740	GCA_001563225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/225/GCA_001563225.1_ASM156322v1	27056223	J2
Chryseobacterium vrystaatense	307480	PRJNA255945	255945	FCB group	Bacteroidetes/Chlorobi group	5.48784	37.1	-	JPRI01	18	5117	4992	8/5/14	4/17/17	Contig	GCAT-SEEK	SAMN02934081	GCA_000737765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/765/GCA_000737765.1_ASM73776v1	-	LMG 22846
Brachybacterium alimentarium	47845	PRJNA387187	387187	Terrabacteria group	Actinobacteria	4.26309	70	-	NRGR01	70	3742	3588	9/21/17	9/23/17	Scaffold	"Dutton Lab, UCSD"	SAMN07141157	GCA_002332305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/305/GCA_002332305.1_ASM233230v1	28644126	341_9
Raoultella terrigena	577	PRJNA254925	254925	Proteobacteria	Gammaproteobacteria	5.7172	57.8	-	LANE01	10	5436	5200	3/27/15	4/10/17	Contig	DOE Joint Genome Institute	SAMN02910448	GCA_000964285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/285/GCA_000964285.1_ASM96428v1	26067957	R1Gly
Pseudomonas sp. Os17	1500686	PRJDB2875	279057	Proteobacteria	Gammaproteobacteria	6.88546	63.5	chromosome Unknown:NZ_AP014627.1/AP014627.1	-	1	6251	6063	3/19/15	4/11/17	Complete Genome	National Institute of Agrobiological Sciences	SAMD00018365	GCA_001547895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/895/GCA_001547895.1_ASM154789v1	25496595	Os17
Desulfovibrio hydrothermalis AM13 = DSM 14728	1121451	PRJEB582	184397	Proteobacteria	delta/epsilon subdivisions	3.70836	45.1086	chromosome:NC_020055.1/FO203522.1; plasmid DESAM_p:NC_019953.1/FO203523.1	-	2	3330	3207	12/19/12	4/8/17	Chromosome	Genoscope CEA	SAMEA2272440	GCA_000331025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/025/GCA_000331025.1_ASM33102v1	-	AM13
Rhodococcus qingshengii	334542	PRJNA362840	362840	Terrabacteria group	Actinobacteria	6.4692	62.5	-	MUBD01	40	6039	5871	4/11/17	4/13/17	Scaffold	University of Szeged	SAMN06264123	GCA_002087025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/025/GCA_002087025.1_ASM208702v1	-	MK1
Paenibacillus fonticola DSM 21315	1122918	PRJNA185288	185288	Terrabacteria group	Firmicutes	6.30927	47.7	-	ARMT01	62	5645	5414	4/23/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441316	GCA_000381905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/905/GCA_000381905.1_ASM38190v1	-	DSM 21315
Brevundimonas aveniformis DSM 17977	1121123	PRJNA185350	185350	Proteobacteria	Alphaproteobacteria	2.57957	65.1	-	AUAO01	6	2616	2547	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440608	GCA_000428765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/765/GCA_000428765.1_ASM42876v1	-	DSM 17977
Conchiformibius kuhniae DSM 17694	1121351	PRJNA185351	185351	Proteobacteria	Betaproteobacteria	2.11863	56.2	-	AUAP01	50	2091	1981	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441546	GCA_000428785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/785/GCA_000428785.1_ASM42878v1	-	DSM 17694
Corynebacterium freiburgense DSM 45254	1121360	PRJNA185352	185352	Terrabacteria group	Actinobacteria	2.9102	49.8	-	AUAQ01	19	2676	2594	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441205	GCA_000428805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/805/GCA_000428805.1_ASM42880v1	-	DSM 45254
Desulfomicrobium escambiense DSM 10707	1121411	PRJNA185353	185353	Proteobacteria	delta/epsilon subdivisions	3.78211	63.7	-	AUAR01	38	3401	3257	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440873	GCA_000428825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/825/GCA_000428825.1_ASM42882v1	-	DSM 10707
Dyadobacter alkalitolerans DSM 23607	1121481	PRJNA185354	185354	FCB group	Bacteroidetes/Chlorobi group	6.28761	45.7	-	AUAS01	50	5450	5273	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440874	GCA_000428845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/845/GCA_000428845.1_ASM42884v1	-	DSM 23607
Hamadaea tsunoensis DSM 44101	1121946	PRJNA185360	185360	Terrabacteria group	Actinobacteria	9.47889	70.8	-	AUAX01	69	8342	8087	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440609	GCA_000428945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/945/GCA_000428945.1_ASM42894v1	-	DSM 44101
Marinobacterium litorale DSM 23545	1122201	PRJNA185362	185362	Proteobacteria	Gammaproteobacteria	4.3804	56.4	-	AUAZ01	64	4251	4075	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440877	GCA_000428985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/985/GCA_000428985.1_ASM42898v1	-	DSM 23545
Novosphingobium acidiphilum DSM 19966	1122612	PRJNA185363	185363	Proteobacteria	Alphaproteobacteria	3.70906	64.3	-	AUBA01	54	3408	3277	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440878	GCA_000429005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/005/GCA_000429005.1_ASM42900v1	-	DSM 19966
Pseudonocardia spinosispora DSM 44797	1123025	PRJNA185365	185365	Terrabacteria group	Actinobacteria	9.53756	69.4	-	AUBB01	73	8540	8286	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441208	GCA_000429025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/025/GCA_000429025.1_ASM42902v1	-	DSM 44797
Salinarimonas rosea DSM 21201	1123229	PRJNA185366	185366	Proteobacteria	Alphaproteobacteria	5.24532	71.8	-	AUBC01	56	4901	4735	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441547	GCA_000429045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/045/GCA_000429045.1_ASM42904v1	-	DSM 21201
Silanimonas lenta DSM 16282	1123253	PRJNA185367	185367	Proteobacteria	Gammaproteobacteria	2.64704	71.1	-	AUBD01	21	2458	2348	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441209	GCA_000429065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/065/GCA_000429065.1_ASM42906v1	-	DSM 16282
Sphingopyxis baekryungensis DSM 16222	1123270	PRJNA185369	185369	Proteobacteria	Alphaproteobacteria	3.06821	62.4	-	ATUR01	10	2925	2820	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441583	GCA_000420305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/305/GCA_000420305.1_ASM42030v1	-	DSM 16222
Streptomyces flavidovirens DSM 40150	1123319	PRJNA185371	185371	Terrabacteria group	Actinobacteria	7.07041	70.4	-	AUBE01	49	6469	6076	7/15/13	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440879	GCA_000429085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/085/GCA_000429085.1_ASM42908v1	-	DSM 40150
Weissella halotolerans DSM 20190	1123500	PRJNA185373	185373	Terrabacteria group	Firmicutes	1.35838	43.1	-	ATUU01	6	1379	1289	7/9/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440571	GCA_000420365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/365/GCA_000420365.1_ASM42036v1	-	DSM 20190
Pseudomonas parafulva	157782	PRJNA263863	263863	Proteobacteria	Gammaproteobacteria	5.08762	63.5	chromosome:NZ_CP009747.1/CP009747.1	-	1	4457	4296	12/9/14	4/2/17	Complete Genome	China National Rice Research Institute	SAMN03107785	GCA_000800255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/255/GCA_000800255.1_ASM80025v1	-	CRS01-1
Oceanimonas smirnovii ATCC BAA-899	1279015	PRJNA185294	185294	Proteobacteria	Gammaproteobacteria	3.28272	56.2	-	ARMW01	27	3165	3045	4/23/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440493	GCA_000381965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/965/GCA_000381965.1_ASM38196v1	-	ATCC BAA-899
Microbulbifer variabilis ATCC 700307	1279017	PRJNA185297	185297	Proteobacteria	Gammaproteobacteria	4.83567	48.8	-	AQYJ01	29	4369	4239	4/23/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441043	GCA_000380565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/565/GCA_000380565.1_ASM38056v1	-	ATCC 700307
Adlercreutzia equolifaciens DSM 19450	1384484	PRJDB1443	219074	Terrabacteria group	Actinobacteria	2.86253	63.5	chromosome:NC_022567.1/AP013105.1	-	1	2326	2242	8/17/13	4/17/17	Complete Genome	Azabu University	SAMD00061014	GCA_000478885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/885/GCA_000478885.1_ASM47888v1	24051320	DSM 19450
Streptomyces rimosus subsp. rimosus	132474	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.58992	71.9	-	JNYR01	129	8438	8019	7/1/14	3/9/17	Contig	University of Illinois	SAMN02645319	GCA_000717285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/285/GCA_000717285.1_ASM71728v1	-	NRRL ISP-5260
Actinomyces suimastitidis DSM 15538	1120946	PRJNA185521	185521	Terrabacteria group	Actinobacteria	2.29413	56.4	-	AUBF01	11	1976	1889	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440611	GCA_000429105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/105/GCA_000429105.1_ASM42910v1	-	DSM 15538
Actinomyces vaccimaxillae DSM 15804	1120947	PRJNA185522	185522	Terrabacteria group	Actinobacteria	2.33843	57.6	-	ATUX01	13	2082	1992	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441246	GCA_000420425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/425/GCA_000420425.1_ASM42042v1	-	DSM 15804
Aequorivita capsosiphonis DSM 23843	1120951	PRJNA185523	185523	FCB group	Bacteroidetes/Chlorobi group	4.0429	36.9	-	AUBG01	26	3631	3530	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440880	GCA_000429125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/125/GCA_000429125.1_ASM42912v1	-	DSM 23843
Aestuariibacter salexigens DSM 15300	1120953	PRJNA185524	185524	Proteobacteria	Gammaproteobacteria	3.78384	48.5	-	AUBH01	22	3449	3361	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441210	GCA_000429145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/145/GCA_000429145.1_ASM42914v1	-	DSM 15300
Acetobacter nitrogenifigens DSM 23921 = LMG 23498	1120919	PRJNA185525	185525	Proteobacteria	Alphaproteobacteria	4.27052	60.5	-	AUBI01	51	3802	3613	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441211	GCA_000429165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/165/GCA_000429165.1_ASM42916v1	-	DSM 23921
Actinoalloteichus cyanogriseus	65497	PRJNA238534	238534	Terrabacteria group	Actinobacteria	6.02637	72.5	-	JODV01	153	4946	4746	7/2/14	4/9/17	Contig	University of Illinois	SAMN02645219	GCA_000718005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/005/GCA_000718005.1_ASM71800v1	-	NRRL B-2194
Hippea alviniae EP5-r	944480	PRJNA185374	185374	Proteobacteria	delta/epsilon subdivisions	1.74939	37	-	ATUV01	4	1804	1738	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02440906	GCA_000420385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/385/GCA_000420385.1_ASM42038v1	-	EP5-r
Cesiribacter andamanensis AMV16	1279009	PRJNA185385	185385	FCB group	Bacteroidetes/Chlorobi group	4.75996	54.6	-	AODQ01	237	4194	3877	3/25/13	5/18/17	Contig	Centre for Cellular and Molecular Biology	SAMN02469440	GCA_000348925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/925/GCA_000348925.1_CeAn1	23682146	AMV16
Cutibacterium avidum 44067	1170318	PRJNA157751	157751	Terrabacteria group	Actinobacteria	2.52614	63.5	chromosome:NC_021064.1/CP005287.1	-	1	2348	2198	4/17/13	9/10/17	Complete Genome	BAYGEN	SAMN02603001	GCA_000367205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/205/GCA_000367205.1_ASM36720v1	23792747	44067
Actinotignum urinale DSM 15805	1120933	PRJNA185528	185528	Terrabacteria group	Actinobacteria	1.92034	50.9	-	ATUY01	29	1690	1572	7/9/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441584	GCA_000420445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/445/GCA_000420445.1_ASM42044v1	-	DSM 15805
Actinomyces dentalis DSM 19115	1120941	PRJNA185529	185529	Terrabacteria group	Actinobacteria	3.53139	73.1	-	AUBL01	91	2926	2702	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440612	GCA_000429225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/225/GCA_000429225.1_ASM42922v1	-	DSM 19115
Desulfovibrio gigas DSM 1382 = ATCC 19364	1121448	PRJNA205164	205164	Proteobacteria	delta/epsilon subdivisions	3.79602	63.6919	chromosome:NC_022444.1/CP006585.1; plasmid unnamed:NC_022436.1/CP006586.1	-	2	3360	3266	9/18/13	4/9/17	Chromosome	ITQB Antonio Xavier - UNL	SAMN02603429	GCA_000468495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/495/GCA_000468495.1_ASM46849v1	23974026	ATCC 19364
Desulfovibrio inopinatus DSM 10711	1121453	PRJNA185534	185534	Proteobacteria	delta/epsilon subdivisions	5.76755	49.2	-	AUBP01	69	5005	4833	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441548	GCA_000429305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/305/GCA_000429305.1_ASM42930v1	-	DSM 10711
Desulfovibrio longus DSM 6739	1121456	PRJNA185535	185535	Proteobacteria	delta/epsilon subdivisions	3.70183	63.7	-	ATVA01	19	3405	3324	7/9/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441247	GCA_000420485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/485/GCA_000420485.1_ASM42048v1	-	DSM 6739
Desulfovibrio putealis DSM 16056	1121462	PRJNA185536	185536	Proteobacteria	delta/epsilon subdivisions	4.70574	62.8	-	AUBQ01	29	4210	4078	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441200	GCA_000429325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/325/GCA_000429325.1_ASM42932v1	-	DSM 16056
Desulfovirgula thermocuniculi DSM 16036	1121468	PRJNA185537	185537	Terrabacteria group	Firmicutes	3.06045	61.4	-	AUBR01	131	3283	3031	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440614	GCA_000429345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/345/GCA_000429345.1_ASM42934v1	-	DSM 16036
Pseudodonghicola xiamenensis DSM 18339	1121479	PRJNA185538	185538	Proteobacteria	Alphaproteobacteria	4.72849	63.6	-	AUBS01	87	4517	4276	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440615	GCA_000429365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/365/GCA_000429365.1_ASM42936v1	-	DSM 18339
Algoriphagus marincola DSM 16067	1120966	PRJNA185540	185540	FCB group	Bacteroidetes/Chlorobi group	4.43168	41.9	-	AUBU01	27	3930	3830	7/15/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440616	GCA_000429405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/405/GCA_000429405.1_ASM42940v1	-	DSM 16067
Algoriphagus mannitolivorans DSM 15301	1120965	PRJNA185541	185541	FCB group	Bacteroidetes/Chlorobi group	4.15295	42.7	-	AUBV01	22	3676	3597	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441202	GCA_000429425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/425/GCA_000429425.1_ASM42942v1	-	DSM 15301
Algoriphagus terrigena DSM 22685	1120967	PRJNA185542	185542	FCB group	Bacteroidetes/Chlorobi group	5.78338	47.8	-	AUBW01	58	4997	4841	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440865	GCA_000429445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/445/GCA_000429445.1_ASM42944v1	-	DSM 22685
Algoriphagus vanfongensis DSM 17529	1120968	PRJNA185543	185543	FCB group	Bacteroidetes/Chlorobi group	4.71206	42.8	-	AUBX01	17	4062	3958	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441203	GCA_000429465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/465/GCA_000429465.1_ASM42946v1	-	DSM 17529
Aliagarivorans marinus DSM 23064	1120969	PRJNA185544	185544	Proteobacteria	Gammaproteobacteria	4.87835	53.3	-	AUBY01	42	4466	4314	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440617	GCA_000429485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/485/GCA_000429485.1_ASM42948v1	-	DSM 23064
Aliagarivorans taiwanensis DSM 22990	1120970	PRJNA185545	185545	Proteobacteria	Gammaproteobacteria	4.41327	53.3	-	AUBZ01	80	4157	3948	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440618	GCA_000429505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/505/GCA_000429505.1_ASM42950v1	-	DSM 22990
Alicyclobacillus contaminans DSM 17975	1120971	PRJNA185546	185546	Terrabacteria group	Firmicutes	3.27232	58.2	-	AUCA01	111	3393	3152	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440619	GCA_000429525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/525/GCA_000429525.1_ASM42952v1	-	DSM 17975
Alloscardovia omnicolens DSM 21503	1120979	PRJNA185547	185547	Terrabacteria group	Actinobacteria	1.84715	46.6	-	ATVB01	43	1615	1504	7/9/13	4/1/17	Contig	DOE Joint Genome Institute	SAMN02441248	GCA_000420505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/505/GCA_000420505.1_ASM42050v1	-	DSM 21503
Aquaspirillum serpens DSM 68	1121004	PRJNA185548	185548	Proteobacteria	Betaproteobacteria	2.6128	49.8	-	ATVC01	119	2531	2305	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02440573	GCA_000420525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/525/GCA_000420525.1_ASM42052v1	-	DSM 68
Arenibacter certesii DSM 19833	1121011	PRJNA185549	185549	FCB group	Bacteroidetes/Chlorobi group	4.98975	37.7	-	AUCB01	83	4072	3886	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440866	GCA_000429545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/545/GCA_000429545.1_ASM42954v1	-	DSM 19833
Arenimonas oryziterrae DSM 21050 = YC6267	1121015	PRJNA185550	185550	Proteobacteria	Gammaproteobacteria	3.09176	65.6	-	ATVD01	25	2918	2842	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441585	GCA_000420545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/545/GCA_000420545.1_ASM42054v1	-	DSM 21050
Atopobium fossor DSM 15642	1121023	PRJNA185552	185552	Terrabacteria group	Actinobacteria	1.65737	45.4	-	AXXR01	4	1532	1465	10/25/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440747	GCA_000483125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/125/GCA_000483125.1_ASM48312v1	-	DSM 15642
Atopococcus tabaci DSM 17538	1121024	PRJNA185553	185553	Terrabacteria group	Firmicutes	2.2672	45.6	-	AUCD01	139	2365	2111	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441188	GCA_000429585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/585/GCA_000429585.1_ASM42958v1	-	DSM 17538
Azonexus hydrophilus DSM 23864	1121032	PRJNA185554	185554	Proteobacteria	Betaproteobacteria	3.34118	62.8	-	AUCE01	16	3204	3100	7/15/13	6/20/17	Scaffold	DOE Joint Genome Institute	SAMN02441189	GCA_000429605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/605/GCA_000429605.1_ASM42960v1	-	DSM 23864
Azospirillum halopraeferens DSM 3675	1121033	PRJNA185555	185555	Proteobacteria	Alphaproteobacteria	6.51238	70.7	-	AUCF01	50	5996	5797	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440867	GCA_000429625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/625/GCA_000429625.1_ASM42962v1	-	DSM 3675
Niveispirillum irakense DSM 11586	1121034	PRJNA185556	185556	Proteobacteria	Alphaproteobacteria	5.45578	62.9	-	AUCG01	20	4743	4617	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440868	GCA_000429645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/645/GCA_000429645.1_ASM42964v1	-	DSM 11586
Azovibrio restrictus DSM 23866	1121035	PRJNA185557	185557	Proteobacteria	Betaproteobacteria	4.02569	65.4	-	AUCH01	53	3773	3616	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441190	GCA_000429665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/665/GCA_000429665.1_ASM42966v1	-	DSM 23866
Bacillus aidingensis DSM 18341	1121085	PRJNA185558	185558	Terrabacteria group	Firmicutes	4.41814	44.6	-	AUCI01	55	4462	4276	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440621	GCA_000429685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/685/GCA_000429685.1_ASM42968v1	-	DSM 18341
Bacillus aurantiacus DSM 18675	1121086	PRJNA185559	185559	Terrabacteria group	Firmicutes	4.02308	42.5	-	AUCJ01	12	3990	3872	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441191	GCA_000429705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/705/GCA_000429705.1_ASM42970v1	-	DSM 18675
Bacillus chagannorensis DSM 18086	1121087	PRJNA185560	185560	Terrabacteria group	Firmicutes	3.5197	52.6	-	AUCK01	38	3421	3307	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441192	GCA_000429725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/725/GCA_000429725.1_ASM42972v1	-	DSM 18086
Bifidobacterium magnum	1692	PRJNA239851	239851	Terrabacteria group	Actinobacteria	1.82248	58.7	-	JGZB01	13	1571	1462	8/18/14	4/9/17	Contig	University of Parma	SAMN02673439	GCA_000741255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/255/GCA_000741255.1_Bifmag	"2,508,549,325,107,960"	LMG 11591
Gemmobacter nectariphilus DSM 15620	1121271	PRJNA185564	185564	Proteobacteria	Alphaproteobacteria	4.52364	66.2	-	AUCM01	57	4382	4211	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440622	GCA_000429765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/765/GCA_000429765.1_ASM42976v1	-	DSM 15620
Chitinibacter tainanensis DSM 15459	1121274	PRJNA185565	185565	Proteobacteria	Betaproteobacteria	3.42599	56.1	-	AUCN01	17	3236	3133	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441549	GCA_000429785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/785/GCA_000429785.1_ASM42978v1	-	DSM 15459
Cohnella thermotolerans DSM 17683	1121347	PRJNA185568	185568	Terrabacteria group	Firmicutes	5.05103	58.3	-	AUCP01	138	4749	4441	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441193	GCA_000429825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/825/GCA_000429825.1_ASM42982v1	-	DSM 17683
Comamonas composti DSM 21721	1121349	PRJNA185569	185569	Proteobacteria	Betaproteobacteria	4.63407	63.3	-	AUCQ01	55	4135	3949	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440623	GCA_000429845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/845/GCA_000429845.1_ASM42984v1	-	DSM 21721
Corynebacterium massiliense DSM 45435	1121364	PRJNA185571	185571	Terrabacteria group	Actinobacteria	2.18302	65	-	ATVG01	26	2024	1902	7/9/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441587	GCA_000420605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/605/GCA_000420605.1_ASM42060v1	-	DSM 45435
Cucumibacter marinus DSM 18995	422296	PRJNA185572	185572	Proteobacteria	Alphaproteobacteria	3.71366	62.2	-	AUCR01	22	3586	3499	7/15/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441550	GCA_000429865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/865/GCA_000429865.1_ASM42986v1	-	DSM 18995
Desulfatibacillum aliphaticivorans DSM 15576	1121392	PRJNA185574	185574	Proteobacteria	delta/epsilon subdivisions	6.46996	54.4	-	AUCT01	64	5417	5264	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441551	GCA_000429905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/905/GCA_000429905.1_ASM42990v1	-	DSM 15576
Desulfatirhabdium butyrativorans DSM 18734	1121394	PRJNA185575	185575	Proteobacteria	delta/epsilon subdivisions	4.48198	54.9	-	AUCU01	73	4004	3852	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440872	GCA_000429925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/925/GCA_000429925.1_ASM42992v1	-	DSM 18734
Desulfobulbus japonicus DSM 18378	1121403	PRJNA185576	185576	Proteobacteria	delta/epsilon subdivisions	5.80057	45.8	-	AUCV01	124	5035	4832	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440624	GCA_000429945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/945/GCA_000429945.1_ASM42994v1	-	DSM 18378
Desulfobulbus mediterraneus DSM 13871	1121404	PRJNA185577	185577	Proteobacteria	delta/epsilon subdivisions	4.79681	57.6	-	AUCW01	68	4021	3897	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441536	GCA_000429965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/965/GCA_000429965.1_ASM42996v1	-	DSM 13871
Desulfocurvus vexinensis DSM 17965	1121406	PRJNA185578	185578	Proteobacteria	delta/epsilon subdivisions	3.62718	69.7	-	JAEX01	57	3359	3200	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02584926	GCA_000519125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/125/GCA_000519125.1_ASM51912v1	-	DSM 17965
Desulfovibrio bastinii DSM 16055	1121441	PRJNA185579	185579	Proteobacteria	delta/epsilon subdivisions	3.90917	43.1	-	AUCX01	39	3544	3418	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440625	GCA_000429985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/985/GCA_000429985.1_ASM42998v1	-	DSM 16055
Desulfovibrio cuneatus DSM 11391	1121443	PRJNA185580	185580	Proteobacteria	delta/epsilon subdivisions	3.35913	53.5	-	AUCY01	76	2898	2751	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440626	GCA_000430005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/005/GCA_000430005.1_ASM43000v1	-	DSM 11391
Flavobacterium suncheonense GH29-5 = DSM 17707	1121899	PRJNA185581	185581	FCB group	Bacteroidetes/Chlorobi group	2.88066	40.6	-	AUCZ01	54	2763	2677	7/15/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440857	GCA_000430025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/025/GCA_000430025.1_ASM43002v1	-	DSM 17707
Eisenibacter elegans DSM 3317	1121902	PRJNA185582	185582	FCB group	Bacteroidetes/Chlorobi group	4.03071	47.9	-	AUMD01	15	3405	3307	7/15/13	4/6/17	Scaffold	DOE Joint Genome Institute	SAMN02440687	GCA_000430505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/505/GCA_000430505.1_ASM43050v1	-	DSM 3317
Hugenholtzia roseola DSM 9546	1121903	PRJNA185583	185583	FCB group	Bacteroidetes/Chlorobi group	4.25486	42.2	-	AUGI01	60	3508	3380	7/10/13	5/22/17	Scaffold	DOE Joint Genome Institute	SAMN02441176	GCA_000422585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/585/GCA_000422585.1_ASM42258v1	-	DSM 9546
Fodinicurvata sediminis DSM 21159	570952	PRJNA185585	185585	Proteobacteria	Alphaproteobacteria	3.69055	60.6	-	ATVH01	20	3515	3415	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441250	GCA_000420625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/625/GCA_000420625.1_ASM42062v1	-	DSM 21159
Enterorhabdus mucosicola DSM 19490	1121866	PRJNA185586	185586	Terrabacteria group	Actinobacteria	3.00987	64.3	-	AUGK01	27	2473	2367	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440648	GCA_000422625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/625/GCA_000422625.1_ASM42262v1	-	DSM 19490
Eudoraea adriatica DSM 19308	1121875	PRJNA185587	185587	FCB group	Bacteroidetes/Chlorobi group	3.90647	38.3	-	ARNE01	19	3465	3393	4/23/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440497	GCA_000382125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/125/GCA_000382125.1_ASM38212v1	-	DSM 19308
Ferrimonas futtsuensis DSM 18154	1121878	PRJNA185588	185588	Proteobacteria	Gammaproteobacteria	4.29603	58.7	-	AUGL01	39	3955	3836	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441517	GCA_000422645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/645/GCA_000422645.1_ASM42264v1	-	DSM 18154
Ferrimonas senticii DSM 18821	1121880	PRJNA185589	185589	Proteobacteria	Gammaproteobacteria	3.88574	54	-	AUGM01	30	3504	3396	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440848	GCA_000422665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/665/GCA_000422665.1_ASM42266v1	-	DSM 18821
Flavobacterium gelidilacus DSM 15343	1121891	PRJNA185590	185590	FCB group	Bacteroidetes/Chlorobi group	3.44104	30	-	AUGN01	47	3146	3057	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441177	GCA_000422685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/685/GCA_000422685.1_ASM42268v1	-	DSM 15343
Flavobacterium soli DSM 19725	1121897	PRJNA185591	185591	FCB group	Bacteroidetes/Chlorobi group	4.00285	36.1	-	AUGO01	21	3505	3420	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441178	GCA_000422705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/705/GCA_000422705.1_ASM42270v1	-	DSM 19725
Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790	1121898	PRJNA185592	185592	FCB group	Bacteroidetes/Chlorobi group	4.63857	41.6	-	AUGP01	19	4071	3982	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441179	GCA_000422725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/725/GCA_000422725.1_ASM42272v1	-	DSM 21790
Nevskia ramosa DSM 11499	1122603	PRJNA185605	185605	Proteobacteria	Gammaproteobacteria	4.51529	64.4	-	ATVI01	13	4053	3952	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440574	GCA_000420645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/645/GCA_000420645.1_ASM42064v1	-	DSM 11499
Nocardioides halotolerans DSM 19273	1122609	PRJNA185606	185606	Terrabacteria group	Actinobacteria	4.85651	72	-	AUGT01	24	4666	4535	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440651	GCA_000422805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/805/GCA_000422805.1_ASM42280v1	-	DSM 19273
Nocardioides insulae DSM 17944	1122610	PRJNA185607	185607	Terrabacteria group	Actinobacteria	4.06045	70.8	-	1-Aug	17	3674	3563	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441164	GCA_000422825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/825/GCA_000422825.1_ASM42282v1	-	DSM 17944
Oceanobacter kriegii DSM 6294	1122615	PRJNA185608	185608	Proteobacteria	Gammaproteobacteria	4.50583	55.3	-	AUGV01	36	4002	3898	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441519	GCA_000422845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/845/GCA_000422845.1_ASM42284v1	-	DSM 6294
Oceanospirillum maris DSM 6286	1122617	PRJNA185609	185609	Proteobacteria	Gammaproteobacteria	3.70981	45.9	-	AUGW01	44	3336	3172	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440652	GCA_000422865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/865/GCA_000422865.1_ASM42286v1	-	DSM 6286
Ottowia thiooxydans DSM 14619	1122623	PRJNA185610	185610	Proteobacteria	Betaproteobacteria	7.04872	58.6	-	AUGX01	79	6428	6234	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441165	GCA_000422885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/885/GCA_000422885.1_ASM42288v1	-	DSM 14619
Paludibacterium yongneupense DSM 18731	1122928	PRJNA185612	185612	Proteobacteria	Betaproteobacteria	4.33294	62.2	-	AUGZ01	53	4087	3910	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440653	GCA_000422925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/925/GCA_000422925.1_ASM42292v1	-	DSM 18731
Pedobacter oryzae DSM 19973	468059	PRJNA185613	185613	FCB group	Bacteroidetes/Chlorobi group	3.44577	37.8	-	AUHA01	10	3089	3026	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440833	GCA_000422945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/945/GCA_000422945.1_ASM42294v1	-	DSM 19973
Pleomorphomonas oryzae DSM 16300	1122963	PRJNA185614	185614	Proteobacteria	Alphaproteobacteria	5.23045	63	-	AUHB01	37	4852	4733	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440654	GCA_000422965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/965/GCA_000422965.1_ASM42296v1	-	DSM 16300
Ponticaulis koreensis DSM 19734	551789	PRJNA185615	185615	Proteobacteria	Alphaproteobacteria	3.40038	54.8	-	ATVJ01	6	3350	3286	7/9/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441235	GCA_000420665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/665/GCA_000420665.1_ASM42066v1	-	DSM 19734
Porphyrobacter cryptus DSM 12079	1122970	PRJNA185616	185616	Proteobacteria	Alphaproteobacteria	2.95443	67.8	-	AUHC01	34	2861	2720	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440655	GCA_000422985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/985/GCA_000422985.1_ASM42298v1	-	DSM 12079
Gelidibacter mesophilus DSM 14095	1121912	PRJNA185617	185617	FCB group	Bacteroidetes/Chlorobi group	4.43094	36.9	-	AUHD01	55	3804	3653	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440834	GCA_000423005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/005/GCA_000423005.1_ASM42300v1	-	DSM 14095
Globicatella sulfidifaciens DSM 15739	1121925	PRJEB19541	376320	Terrabacteria group	Firmicutes	2.21757	35.6	-	FUWO01	39	1998	1900	3/4/17	3/10/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02746011	GCA_900167405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/405/GCA_900167405.1_IMG-taxon_2524614644_annotated_assembly	-	DSM 15739
Gordonia shandongensis DSM 45094	1121928	PRJNA185620	185620	Terrabacteria group	Actinobacteria	3.33065	69.3	-	AUHE01	33	3119	2988	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440656	GCA_000423025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/025/GCA_000423025.1_ASM42302v1	-	DSM 45094
Gramella portivictoriae DSM 23547	1121932	PRJNA185621	185621	FCB group	Bacteroidetes/Chlorobi group	3.2694	39.6	-	AUHF01	8	3008	2924	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441167	GCA_000423045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/045/GCA_000423045.1_ASM42304v1	-	DSM 23547
Gramella echinicola DSM 19838	1121931	PRJNA185622	185622	FCB group	Bacteroidetes/Chlorobi group	3.51383	36.9	-	AUHG01	18	3204	3121	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441504	GCA_000423065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/065/GCA_000423065.1_ASM42306v1	-	DSM 19838
Halalkalibacillus halophilus DSM 18494	1121936	PRJNA185624	185624	Terrabacteria group	Firmicutes	2.70755	37.4	-	AUHI01	25	2806	2704	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440657	GCA_000423105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/105/GCA_000423105.1_ASM42310v1	-	DSM 18494
Haliea salexigens DSM 19537	1121937	PRJNA185625	185625	Proteobacteria	Gammaproteobacteria	4.25872	60.8	-	AUHJ01	76	3946	3772	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441505	GCA_000423125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/125/GCA_000423125.1_ASM42312v1	-	DSM 19537
Helcococcus sueciensis DSM 17243	1121947	PRJNA185626	185626	Terrabacteria group	Firmicutes	1.57377	28.4	-	AUHK01	43	1466	1358	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441168	GCA_000423145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/145/GCA_000423145.1_ASM42314v1	-	DSM 17243
Idiomarina sediminum DSM 21906	1122124	PRJNA185627	185627	Proteobacteria	Gammaproteobacteria	2.62447	50.4	-	AUHL01	10	2474	2394	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440836	GCA_000423165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/165/GCA_000423165.1_ASM42316v1	-	DSM 21906
Hymenobacter norwichensis DSM 15439	1121957	PRJNA185628	185628	FCB group	Bacteroidetes/Chlorobi group	6.00831	56.4	-	ATVL01	14	4978	4877	7/9/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441588	GCA_000420705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/705/GCA_000420705.1_ASM42070v1	-	DSM 15439
Inquilinus limosus DSM 16000	1122125	PRJNA185629	185629	Proteobacteria	Alphaproteobacteria	7.41371	69.9	-	AUHM01	64	6993	6778	7/10/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441506	GCA_000423185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/185/GCA_000423185.1_ASM42318v1	-	DSM 16000
Bifidobacterium tsurumiense	356829	PRJNA239871	239871	Terrabacteria group	Actinobacteria	2.16443	52.8	-	JGZU01	25	1733	1568	8/18/14	4/9/17	Contig	University of Parma	SAMN02673458	GCA_000741765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/765/GCA_000741765.1_Biftsu	"2,508,549,325,107,960"	JCM 13495
Neptunomonas japonica DSM 18939	1122599	PRJNA185603	185603	Proteobacteria	Gammaproteobacteria	4.39155	43.7	-	AUGR01	39	4209	4064	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440650	GCA_000422765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/765/GCA_000422765.1_ASM42276v1	-	DSM 18939
Nesiotobacter exalbescens DSM 16456	1122601	PRJNA185604	185604	Proteobacteria	Alphaproteobacteria	4.15702	55.1	-	AUGS01	36	3770	3657	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441518	GCA_000422785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/785/GCA_000422785.1_ASM42278v1	-	DSM 16456
Jonesia quinghaiensis DSM 15701	1122130	PRJNA185630	185630	Terrabacteria group	Actinobacteria	3.03813	57.1	-	AUHN01	12	2771	2678	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441507	GCA_000423205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/205/GCA_000423205.1_ASM42320v1	-	DSM 15701
Kaistia adipata DSM 17808	1122131	PRJNA185631	185631	Proteobacteria	Alphaproteobacteria	4.8392	67.1	-	AUHO01	12	4539	4423	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441508	GCA_000423225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/225/GCA_000423225.1_ASM42322v1	-	DSM 17808
Lactobacillus ceti DSM 22408	1122146	PRJNA185632	185632	Terrabacteria group	Firmicutes	1.38575	33.7	-	AUHP01	17	1319	1251	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441169	GCA_000423245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/245/GCA_000423245.1_ASM42324v1	-	DSM 22408
Marinactinospora thermotolerans DSM 45154	1122192	PRJEB19540	376319	Terrabacteria group	Actinobacteria	5.66371	71.6	-	FUWS01	37	4966	4776	3/4/17	3/10/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745673	GCA_900167435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/435/GCA_900167435.1_IMG-taxon_2524614583_annotated_assembly	-	DSM 45154
Marinimicrobium agarilyticum DSM 16975	1122194	PRJNA185639	185639	Proteobacteria	Gammaproteobacteria	4.50229	57.9	-	AUHU01	29	3810	3688	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441511	GCA_000423345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/345/GCA_000423345.1_ASM42334v1	-	DSM 16975
Marinococcus halotolerans DSM 16375	1122203	PRJNA185640	185640	Terrabacteria group	Firmicutes	3.13968	48	-	ATVM01	56	3239	3108	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440907	GCA_000420725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/725/GCA_000420725.1_ASM42072v1	-	DSM 16375
Maritalea myrionectae DSM 19524	1122213	PRJNA185641	185641	Proteobacteria	Alphaproteobacteria	3.53953	52.6	-	AUHV01	10	3472	3416	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441170	GCA_000423365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/365/GCA_000423365.1_ASM42336v1	-	DSM 19524
Mesonia mobilis DSM 19841	1122226	PRJNA185643	185643	FCB group	Bacteroidetes/Chlorobi group	3.20556	35.2	-	AUHX01	59	2968	2875	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440658	GCA_000423405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/405/GCA_000423405.1_ASM42340v1	-	DSM 19841
Meiothermus rufus DSM 22234	604331	PRJNA185644	185644	Terrabacteria group	Deinococcus-Thermus	2.74708	63.1	-	AUHY01	121	2813	2582	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441497	GCA_000423425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/425/GCA_000423425.1_ASM42342v1	-	DSM 22234
Propionicicella superfundia DSM 22317	1122999	PRJNA185647	185647	Terrabacteria group	Actinobacteria	3.62396	70	-	AUIA01	23	3294	3172	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440659	GCA_000423465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/465/GCA_000423465.1_ASM42346v1	-	DSM 22317
Pseudoclavibacter soli DSM 23366	1123013	PRJNA185649	185649	Terrabacteria group	Actinobacteria	2.22305	64.3	-	AUIC01	9	2083	1984	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441498	GCA_000423505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/505/GCA_000423505.1_ASM42350v1	-	DSM 23366
Pseudorhodobacter ferrugineus DSM 5888	1123027	PRJNA185652	185652	Proteobacteria	Alphaproteobacteria	3.43027	58.5	-	ATVN01	42	3431	3244	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441236	GCA_000420745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/745/GCA_000420745.1_ASM42074v1	-	DSM 5888
Stappia stellulata DSM 5886	1123294	PRJNA185664	185664	Proteobacteria	Alphaproteobacteria	4.62317	64.7	-	AUIM01	12	4236	4117	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441158	GCA_000423705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/705/GCA_000423705.1_ASM42370v1	-	DSM 5886
Streptococcus devriesei DSM 19639	1123300	PRJNA185665	185665	Terrabacteria group	Firmicutes	2.12137	41.8	-	AUIN01	17	2084	1981	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441502	GCA_000423725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/725/GCA_000423725.1_ASM42372v1	-	DSM 19639
Streptococcus hyovaginalis DSM 12219	1123305	PRJNA185666	185666	Terrabacteria group	Firmicutes	2.07781	39.9	-	ATVP01	37	2063	1905	7/9/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440576	GCA_000420785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/785/GCA_000420785.1_ASM42078v1	-	DSM 12219
Streptococcus plurextorum DSM 22810	1123314	PRJNA185667	185667	Terrabacteria group	Firmicutes	2.10346	41.1	-	AUIO01	33	2114	1978	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441159	GCA_000423745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/745/GCA_000423745.1_ASM42374v1	-	DSM 22810
Streptococcus porci DSM 23759	1123315	PRJNA185668	185668	Terrabacteria group	Firmicutes	2.29094	40.8	-	AUIP01	35	2313	2153	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440826	GCA_000423765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/765/GCA_000423765.1_ASM42376v1	-	DSM 23759
Thalassobaculum salexigens DSM 19539	1123364	PRJNA185670	185670	Proteobacteria	Alphaproteobacteria	5.08455	67.4	-	AUIR01	12	4724	4611	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441503	GCA_000423805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/805/GCA_000423805.1_ASM42380v1	-	DSM 19539
Thermithiobacillus tepidarius DSM 3134	1123368	PRJNA185671	185671	Proteobacteria	Acidithiobacillia	2.9585	66.8	-	AUIS01	43	2943	2790	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441488	GCA_000423825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/825/GCA_000423825.1_ASM42382v1	-	DSM 3134
Thermodesulfobacterium hveragerdense DSM 12571	1123372	PRJNA185672	185672	Thermodesulfobacteria	Thermodesulfobacteria	1.72959	37.1	-	AUIT01	42	1795	1689	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441489	GCA_000423845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/845/GCA_000423845.1_ASM42384v1	-	DSM 12571
Thermodesulfovibrio thiophilus DSM 17215	1123376	PRJNA185673	185673	Nitrospirae	Nitrospira	1.87147	34.4	-	AUIU01	18	1948	1867	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440662	GCA_000423865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/865/GCA_000423865.1_ASM42386v1	-	DSM 17215
Thermomonas fusca DSM 15424	1123377	PRJNA185674	185674	Proteobacteria	Gammaproteobacteria	3.15145	67.9	-	AUIV01	52	2949	2800	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440663	GCA_000423885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/885/GCA_000423885.1_ASM42388v1	-	DSM 15424
Yaniella halotolerans DSM 15476	1123507	PRJNA185675	185675	Terrabacteria group	Actinobacteria	2.77546	55.6	-	ATVQ01	6	2602	2515	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440577	GCA_000420805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/805/GCA_000420805.1_ASM42080v1	-	DSM 15476
Thermus antranikianii DSM 12462	1123386	PRJNA185676	185676	Terrabacteria group	Deinococcus-Thermus	2.16515	64.8	-	AUIW01	33	2313	2178	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441490	GCA_000423905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/905/GCA_000423905.1_ASM42390v1	-	DSM 12462
Lachnobacterium bovis DSM 14045	1122142	PRJEB16629	349950	Terrabacteria group	Firmicutes	2.71707	31.4	-	FNPG01	58	2456	2298	10/22/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910414	GCA_900107245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/245/GCA_900107245.1_IMG-taxon_2593339158_annotated_assembly	-	DSM 14045
Roseomonas stagni DSM 19981	1123062	PRJEB17425	351645	Proteobacteria	Alphaproteobacteria	6.38446	70.7	-	FOSQ01	44	5924	5755	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745775	GCA_900114315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/315/GCA_900114315.1_IMG-taxon_2602042029_annotated_assembly	-	DSM 19981
Runella zeae DSM 19591	1123078	PRJNA185655	185655	FCB group	Bacteroidetes/Chlorobi group	7.60063	42.2	-	AUIF01	85	6383	6214	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441156	GCA_000423565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/565/GCA_000423565.1_ASM42356v1	-	DSM 19591
Salinimicrobium xinjiangense DSM 19287	1123235	PRJNA185656	185656	FCB group	Bacteroidetes/Chlorobi group	3.76451	41.3	-	AUIG01	45	3409	3291	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440840	GCA_000423585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/585/GCA_000423585.1_ASM42358v1	-	DSM 19287
Saccharospirillum impatiens DSM 12546	1123228	PRJNA185657	185657	Proteobacteria	Gammaproteobacteria	4.74315	55.4	-	AUIH01	148	4338	4111	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440661	GCA_000423605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/605/GCA_000423605.1_ASM42360v1	-	DSM 12546
Sandarakinorhabdus limnophila DSM 17366	1123240	PRJNA185658	185658	Proteobacteria	Alphaproteobacteria	2.61374	64.5	-	ATVO01	11	2548	2456	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441589	GCA_000420765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/765/GCA_000420765.1_ASM42076v1	-	DSM 17366
Sediminimonas qiaohouensis DSM 21189	1123247	PRJNA185660	185660	Proteobacteria	Alphaproteobacteria	3.55498	63.8	-	AUIJ01	67	3472	3292	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441501	GCA_000423645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/645/GCA_000423645.1_ASM42364v1	-	DSM 21189
Solirubrobacter soli DSM 22325	1123262	PRJNA185661	185661	Terrabacteria group	Actinobacteria	9.31396	71.4	-	AUIK01	50	8617	8365	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440825	GCA_000423665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/665/GCA_000423665.1_ASM42366v1	-	DSM 22325
Sphingomonas jaspsi DSM 18422	1123268	PRJNA185662	185662	Proteobacteria	Alphaproteobacteria	2.54801	64.7	-	JFBW01	1	2609	2542	3/3/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02198985	GCA_000585415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/415/GCA_000585415.1_ASM58541v1	-	DSM 18422
Sporomusa ovata DSM 2662	1123288	PRJNA205246	205246	Terrabacteria group	Firmicutes	5.38367	43.3	-	ASXP01	8	5183	4846	8/13/13	4/8/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02469826	GCA_000445445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/445/GCA_000445445.1_SOV1	24029766	DSM 2662
Legionella moravica DSM 19234	1122165	PRJNA185635	185635	Proteobacteria	Gammaproteobacteria	3.76421	40	-	AUHS01	51	3233	3097	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441510	GCA_000423305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/305/GCA_000423305.1_ASM42330v1	-	DSM 19234
Lysobacter defluvii IMMIB APB-9 = DSM 18482	1385515	PRJNA185637	185637	Proteobacteria	Gammaproteobacteria	2.72212	70.3	-	AUHT01	12	2582	2482	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440838	GCA_000423325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/325/GCA_000423325.1_ASM42332v1	-	DSM 18482
Butyrivibrio hungatei NK4A153	877422	PRJNA185721	185721	Terrabacteria group	Firmicutes	3.37254	41	-	AUJY01	31	3104	2982	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440819	GCA_000424465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/465/GCA_000424465.1_ASM42446v1	-	NK4A153
Novispirillum itersonii subsp. itersonii ATCC 12639	1279038	PRJNA185295	185295	Proteobacteria	Alphaproteobacteria	4.29065	63.1	-	ARMX01	34	3855	3730	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441318	GCA_000381985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/985/GCA_000381985.1_ASM38198v1	-	ATCC 12639
Butyrivibrio sp. VCD2006	1280664	PRJNA185679	185679	Terrabacteria group	Firmicutes	4.70528	41.2	-	AUIX01	66	4050	3886	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440827	GCA_000423925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/925/GCA_000423925.1_ASM42392v1	-	VCD2006
Pseudomonas fulva 12-X	743720	PRJNA49675	49675	Proteobacteria	Gammaproteobacteria	4.92077	63.5	chromosome:NC_015556.1/CP002727.1	-	1	4549	4425	5/17/11	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713619	GCA_000213805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/805/GCA_000213805.1_ASM21380v1	-	12-X
Pseudobutyrivibrio ruminis HUN009	1458469	PRJNA237255	237255	Terrabacteria group	Firmicutes	2.80449	38.9	-	JNLH01	2	2578	2482	6/11/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02841228	GCA_000703005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/005/GCA_000703005.1_ASM70300v1	-	HUN009
Blautia wexlerae AGR2146	1280691	PRJNA185692	185692	Terrabacteria group	Firmicutes	3.5831	41.6	-	AUJF01	189	3373	3061	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441492	GCA_000424085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/085/GCA_000424085.1_ASM42408v1	-	AGR2146
Treponema bryantii NK4A124	877418	PRJNA185719	185719	Spirochaetes	Spirochaetia	3.30949	40.2	-	ATWV01	28	2926	2817	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441227	GCA_000421345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/345/GCA_000421345.1_ASM42134v1	-	NK4A124
Tropicibacter litoreus R37	1200284	PRJEB19729	384760	Proteobacteria	Alphaproteobacteria	4.69163	59.2	-	FWFO01	18	4543	4451	4/28/17	5/6/17	Contig	UVEG	SAMEA103892645	GCA_900172225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/225/GCA_900172225.1_Tr.litoreus_CECT7639_Spades_Prokka	-	CECT 7639
Hyphomonas adhaerens MHS-3	1280949	PRJNA186164	186164	Proteobacteria	Alphaproteobacteria	3.66857	61.3	-	ARYH01	9	3528	3458	5/6/14	4/17/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02746697	GCA_000685235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/235/GCA_000685235.1_SOAPdenovo_v1.05	25070064	MHS-3
Hyphomonas johnsonii MHS-2	1280950	PRJNA186166	186166	Proteobacteria	Alphaproteobacteria	3.61877	62.5	-	ARYK01	18	3478	3404	5/6/14	4/17/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02746698	GCA_000685275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/275/GCA_000685275.1_SOAPdenovo_v1.05	25070064	MHS-2
Hyphomonas hirschiana VP5	1280951	PRJNA186167	186167	Proteobacteria	Alphaproteobacteria	3.69052	61.9	-	ARYI01	38	3525	3447	5/6/14	4/17/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02746696	GCA_000685255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/255/GCA_000685255.1_SOAPdenovo_v1.05	-	VP5
Hyphomonas jannaschiana VP2	1280952	PRJNA186169	186169	Proteobacteria	Alphaproteobacteria	3.64084	61.4	-	ARYJ01	30	3533	3467	5/6/14	4/9/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02746699	GCA_000685215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/215/GCA_000685215.1_SOAPdenovo_v1.05	25070064	VP2
Hyphomonas oceanitis SCH89	1280953	PRJNA186170	186170	Proteobacteria	Alphaproteobacteria	4.28017	60.2	-	ARYL01	188	4135	3982	5/6/14	4/17/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02746695	GCA_000685295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/295/GCA_000685295.1_SOAPdenovo_v1.05	25070064	SCH89
Hyphomonas polymorpha PS728	1280954	PRJNA186172	186172	Proteobacteria	Alphaproteobacteria	4.05096	62.3	-	ARYM01	71	3881	3758	5/6/14	4/17/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02746694	GCA_000685315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/315/GCA_000685315.1_SOAPdenovo_v1.05	25070064	PS728
Rhodopseudomonas sp. AAP120	1523430	PRJNA255569	255569	Proteobacteria	Alphaproteobacteria	6.16103	65.7	-	LJIC01	228	5625	5401	9/22/15	4/11/17	Contig	"Institute of Microbiology, ASCR"	SAMN02927151	GCA_001295845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/845/GCA_001295845.1_ASM129584v1	-	AAP120
Klebsiella cf. planticola B43	95610	PRJDA69977	69977	Proteobacteria	Gammaproteobacteria	4.47933	56.3	-	BADH01	847	4452	3672	12/26/12	8/8/17	Scaffold	Kazusa DNA Research Institute	SAMD00036578	GCA_000333535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/535/GCA_000333535.1_ASM33353v1	-	B43
Ideonella sp. B508-1	137716	PRJDA69985	69985	Proteobacteria	Betaproteobacteria	4.93675	68.7	-	BADL01	631	4788	4179	12/26/12	5/18/17	Contig	Kazusa DNA Research Institute	SAMD00036582	GCA_000333615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/615/GCA_000333615.1_ASM33361v1	-	B508-1
Tenacibaculum maritimum NBRC 15946 = NCIMB 2154	1349785	PRJDB1370	231426	FCB group	Bacteroidetes/Chlorobi group	3.22504	31.8	-	BAUG01	159	2890	2765	10/26/13	8/30/17	Contig	National Institute of Technology and Evaluation	SAMD00041826	GCA_000509405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/509/405/GCA_000509405.1_ASM50940v1	-	NBRC 15946
Pseudacidovorax intermedius	433924	PRJNA278222	278222	Proteobacteria	Betaproteobacteria	5.54613	70.2	-	LDSL01	295	5072	4802	12/22/15	4/11/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401387	GCA_001476815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/815/GCA_001476815.1_ASM147681v1	26793183	NS331
Lachnospira multipara ATCC 19207	1282887	PRJNA185693	185693	Terrabacteria group	Firmicutes	2.87186	35.3	-	AUJG01	31	2584	2470	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440666	GCA_000424105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/105/GCA_000424105.1_ASM42410v1	-	ATCC 19207
Methylohalobius crimeensis 10Ki	1283300	PRJNA186467	186467	Proteobacteria	Gammaproteobacteria	3.50961	58.3	-	ATXB01	5	3424	3278	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441580	GCA_000421465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/465/GCA_000421465.1_ASM42146v1	26067976	10Ki
Saccharopolyspora rectivirgula DSM 43747	1283279	PRJNA225638	225638	Terrabacteria group	Actinobacteria	3.97705	68.9	-	AYJW01	182	3749	3533	11/18/13	4/9/17	Contig	uppasala University & Jawaharlal Nehru University	SAMN02472042	GCA_000497205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/205/GCA_000497205.1_SREG	24407634	DSM 43747
Phytoplasma sp. Vc33	1836886	PRJNA293833	293833	Terrabacteria group	Tenericutes	0.687137	27.7	-	LLKK01	29	-	-	4/19/16	6/9/16	Scaffold	Universidad de Chile	SAMN04010523	GCA_001623385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/385/GCA_001623385.2_ASM162338v2	-	-
Natrinema versiforme JCM 10478	1227496	PRJNA174938	174938	Euryarchaeota	Halobacteria	4.1908	64	-	AOID01	72	4193	3962	2/4/13	5/19/17	Contig	"University of California, Davis"	SAMN02471670	GCA_000337195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/195/GCA_000337195.1_ASM33719v1	25393412	JCM 10478
Natronococcus amylolyticus DSM 10524	1227497	PRJNA174940	174940	Euryarchaeota	Halobacteria	4.41653	64.4	-	AOIB01	44	4372	4146	2/4/13	5/19/17	Contig	"University of California, Davis"	SAMN02471669	GCA_000337675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/675/GCA_000337675.1_ASM33767v1	25393412	DSM 10524
Natronococcus jeotgali DSM 18795	1227498	PRJNA174941	174941	Euryarchaeota	Halobacteria	4.49618	64.4	-	AOIA01	170	4488	4121	2/4/13	5/19/17	Contig	"University of California, Davis"	SAMN02471624	GCA_000337695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/695/GCA_000337695.1_ASM33769v1	25393412	DSM 18795
Natronolimnobius innermongolicus JCM 12255	1227499	PRJNA174942	174942	Euryarchaeota	Halobacteria	4.58863	64.3	-	AOHZ01	121	4423	4178	2/4/13	5/19/17	Contig	"University of California, Davis"	SAMN02471623	GCA_000337215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/215/GCA_000337215.1_ASM33721v1	25393412	JCM 12255
Natronorubrum bangense JCM 10635	1227500	PRJNA174943	174943	Euryarchaeota	Halobacteria	4.11128	60.4	-	AOHY01	62	4036	3797	2/4/13	5/19/17	Contig	"University of California, Davis"	SAMN02471622	GCA_000337715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/715/GCA_000337715.1_ASM33771v1	25393412	JCM 10635
Natronorubrum sulfidifaciens JCM 14089	1230460	PRJNA174944	174944	Euryarchaeota	Halobacteria	3.46029	61.8	-	AOHX01	63	3444	3298	2/4/13	4/17/17	Contig	"University of California, Davis"	SAMN02471621	GCA_000337735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/735/GCA_000337735.1_ASM33773v1	25393412	JCM 14089
Mycobacterium caprae	115862	PRJNA326075	326075	Terrabacteria group	Actinobacteria	4.32496	65.6	chromosome:NZ_CP016401.1/CP016401.1	-	1	4197	3972	1/10/17	4/16/17	Chromosome	Ludwig-Maximilians-University	SAMN05257278	GCA_001941665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/665/GCA_001941665.1_ASM194166v1	-	Allgaeu
Alloprevotella rava F0323	679199	PRJNA40691	40691	FCB group	Bacteroidetes/Chlorobi group	2.59387	45.5	-	ACZK01	30	2166	2010	11/2/11	4/17/17	Scaffold	Broad Institute	SAMN02463812	GCA_000234115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/115/GCA_000234115.1_Prevotella_sp_F0323_V1	-	F0323
Streptomyces gancidicus BKS 13-15	1284664	PRJNA186841	186841	Terrabacteria group	Actinobacteria	7.30048	72.6	-	AOHP01	171	6715	6291	2/28/13	5/19/17	Contig	"Institute of Microbial Technology (IMTECH), Chandigarh, India 160036"	SAMN02469981	GCA_000342345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/345/GCA_000342345.1_Whole_genome_assembly	23599292	BKS 13-15
Natrialba hulunbeirensis JCM 10989	1227493	PRJNA174932	174932	Euryarchaeota	Halobacteria	4.15961	61.7	-	AOIM01	48	3883	3681	2/4/13	5/19/17	Contig	"University of California, Davis"	SAMN02471673	GCA_000337575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/575/GCA_000337575.1_ASM33757v1	25393412	JCM 10989
Natrialba taiwanensis DSM 12281	1230458	PRJNA174933	174933	Euryarchaeota	Halobacteria	4.63519	61.5	-	AOIL01	70	4440	4135	2/4/13	5/19/17	Contig	"University of California, Davis"	SAMN02471680	GCA_000337595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/595/GCA_000337595.1_ASM33759v1	25393412	DSM 12281
Natrinema altunense	222984	PRJNA248700	248700	Euryarchaeota	Halobacteria	3.77413	64.6	-	JNCS01	20	3742	3588	7/21/14	4/9/17	Contig	Zhejiang University	SAMN02800870	GCA_000731985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/985/GCA_000731985.1_ASM73198v1	15879273	AJ2
Psychrobacter lutiphocae DSM 21542	1123033	PRJNA187093	187093	Proteobacteria	Gammaproteobacteria	3.17601	41.5	-	ARNF01	79	2661	2477	4/23/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441319	GCA_000382145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/145/GCA_000382145.1_ASM38214v1	-	DSM 21542
Rheinheimera perlucida DSM 18276	1123054	PRJNA187094	187094	Proteobacteria	Gammaproteobacteria	4.00042	48.6	-	ARNG01	83	3757	3592	4/23/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441649	GCA_000382165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/165/GCA_000382165.1_ASM38216v1	-	DSM 18276
Robiginitomaculum antarcticum DSM 21748	1123059	PRJNA187095	187095	Proteobacteria	Alphaproteobacteria	2.76947	52.5	-	AQOY01	5	2644	2584	4/12/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440387	GCA_000365025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/025/GCA_000365025.1_ASM36502v1	-	DSM 21748
Dyadobacter beijingensis DSM 21582	1121482	PRJNA187097	187097	FCB group	Bacteroidetes/Chlorobi group	7.37661	52.1	-	ARNI01	14	6049	5930	4/23/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441320	GCA_000382205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/205/GCA_000382205.1_ASM38220v1	-	DSM 21582
Hymenobacter aerophilus DSM 13606	1121953	PRJNA187098	187098	FCB group	Bacteroidetes/Chlorobi group	4.25304	62.1	-	ARNJ01	62	3773	3626	4/23/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441650	GCA_000382225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/225/GCA_000382225.1_ASM38222v1	-	DSM 13606
Kushneria aurantia DSM 21353	1122139	PRJNA187099	187099	Proteobacteria	Gammaproteobacteria	3.75069	62.7	-	ARNK01	63	3534	3364	4/23/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440978	GCA_000382245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/245/GCA_000382245.1_ASM38224v1	-	DSM 21353
Salinimicrobium terrae DSM 17865	1123234	PRJNA187101	187101	FCB group	Bacteroidetes/Chlorobi group	3.54473	40.4	-	AUKI01	20	3201	3089	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440676	GCA_000424665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/665/GCA_000424665.1_ASM42466v1	-	DSM 17865
Solimonas variicoloris DSM 15731	1123256	PRJNA187102	187102	Proteobacteria	Gammaproteobacteria	4.11945	69.1	-	ARNM01	48	3772	3637	4/23/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440980	GCA_000382285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/285/GCA_000382285.1_ASM38228v1	-	DSM 15731
Vitreoscilla stercoraria DSM 513	1123499	PRJNA187103	187103	Proteobacteria	Betaproteobacteria	2.5813	43.9	-	ARNN01	38	2572	2440	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441651	GCA_000382305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/305/GCA_000382305.1_ASM38230v1	-	DSM 513
Woodsholea maritima DSM 17123	1123503	PRJNA187104	187104	Proteobacteria	Alphaproteobacteria	3.10595	55.7	-	ARNO01	20	2918	2839	4/23/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440981	GCA_000382325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/325/GCA_000382325.1_ASM38232v1	-	DSM 17123
Desulfurobacterium sp. TC5-1	1158318	PRJNA187106	187106	Aquificae	Aquificae	1.65362	39.8	-	ATXC01	4	1719	1661	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02440891	GCA_000421485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/485/GCA_000421485.1_ASM42148v1	-	TC5-1
Massilia niastensis DSM 21313	1122215	PRJNA187115	187115	Proteobacteria	Betaproteobacteria	6.59449	66.3	-	ARNP01	139	5857	5574	4/23/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441321	GCA_000382345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/345/GCA_000382345.1_ASM38234v1	-	DSM 21313
Vitreoscilla filiformis	63	PRJNA392993	392993	Proteobacteria	Betaproteobacteria	3.78755	63.4916	chromosome:NZ_CP022423.1/CP022423.1; plasmid pVF1:NZ_CP022424.1/CP022424.1; plasmid pVF2:NZ_CP022425.1/CP022425.1	-	3	3545	3418	7/20/17	7/22/17	Complete Genome	L'Oreal	SAMN07313362	GCA_002222655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/222/655/GCA_002222655.1_ASM222265v1	-	ATCC 15551
Natrinema gari JCM 14663	1230459	PRJNA174935	174935	Euryarchaeota	Halobacteria	4.02369	63.7	-	AOIJ01	88	4041	3773	2/4/13	4/17/17	Contig	"University of California, Davis"	SAMN02471627	GCA_000337175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/175/GCA_000337175.1_ASM33717v1	25393412	JCM 14663
Amycolatopsis decaplanina DSM 44594	1284240	PRJNA186747	186747	Terrabacteria group	Actinobacteria	8.53328	68.6	-	AOHO01	85	7807	7533	2/26/13	5/18/17	Contig	"Institute of Microbial Technology (IMTECH), Chandigarh, India 160036"	SAMN02470008	GCA_000342005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/005/GCA_000342005.1_Whole_genome_assembly	23558534	DSM 44594
Haloterrigena thermotolerans DSM 11522	1227489	PRJNA174927	174927	Euryarchaeota	Halobacteria	3.89527	65.4	-	AOIR01	68	3889	3695	2/4/13	4/17/17	Contig	"University of California, Davis"	SAMN02471662	GCA_000337115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/115/GCA_000337115.1_ASM33711v1	25393412	DSM 11522
Halorubrum terrestre JCM 10247	1227486	PRJNA174922	174922	Euryarchaeota	Halobacteria	3.37622	68	-	AOIW01	79	3364	3180	2/4/13	3/29/17	Contig	"University of California, Davis"	SAMN02471682	GCA_000337435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/435/GCA_000337435.1_ASM33743v1	25393412	JCM 10247
Halogeometricum pallidum JCM 14848	1227487	PRJNA174923	174923	Euryarchaeota	Halobacteria	4.38452	65.6	-	AOIV01	45	4306	4055	2/4/13	5/18/17	Contig	"University of California, Davis"	SAMN02471630	GCA_000337095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/095/GCA_000337095.1_ASM33709v1	25393412	JCM 14848
Haloterrigena limicola JCM 13563	1230457	PRJNA174925	174925	Euryarchaeota	Halobacteria	3.52203	61.8	-	AOIT01	94	3555	3327	2/4/13	4/17/17	Contig	"University of California, Davis"	SAMN02471681	GCA_000337475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/475/GCA_000337475.1_ASM33747v1	25393412	JCM 13563
Haloterrigena salina JCM 13891	1227488	PRJNA174926	174926	Euryarchaeota	Halobacteria	4.84161	65.2	-	AOIS01	71	4595	4332	2/4/13	5/18/17	Contig	"University of California, Davis"	SAMN02471629	GCA_000337495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/495/GCA_000337495.1_ASM33749v1	25393412	JCM 13891
Halovivax asiaticus JCM 14624	1227490	PRJNA174928	174928	Euryarchaeota	Halobacteria	3.23845	64.5	-	AOIQ01	24	3163	3050	2/4/13	4/17/17	Contig	"University of California, Davis"	SAMN02471651	GCA_000337515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/515/GCA_000337515.1_ASM33751v1	25393412	JCM 14624
Natrialba aegyptia DSM 13077	1227491	PRJNA174929	174929	Euryarchaeota	Halobacteria	4.61836	62	-	AOIP01	66	4477	4203	2/4/13	5/19/17	Contig	"University of California, Davis"	SAMN02471628	GCA_000337535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/535/GCA_000337535.1_ASM33753v1	25393412	DSM 13077
Natrialba chahannaoensis JCM 10990	1227492	PRJNA174931	174931	Euryarchaeota	Halobacteria	4.30927	60.4	-	AOIN01	106	4060	3741	2/4/13	5/19/17	Contig	"University of California, Davis"	SAMN02471674	GCA_000337135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/135/GCA_000337135.1_ASM33713v1	25393412	JCM 10990
Anaerovibrio lipolyticus DSM 3074	1120997	PRJEB18295	355690	Terrabacteria group	Firmicutes	2.78113	43.3	-	FQYW01	38	2693	2562	12/2/16	3/25/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745671	GCA_900141865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/865/GCA_900141865.1_IMG-taxon_2585428091_annotated_assembly	-	DSM 3074
Pseudomonas extremorientalis	169669	PRJEB16257	348879	Proteobacteria	Gammaproteobacteria	6.3731	60.9	chromosome I:NZ_LT629708.1/LT629708.1	-	1	5801	5623	10/20/16	4/13/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04490184	GCA_900104365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/365/GCA_900104365.1_IMG-taxon_2639762715_annotated_assembly	-	BS2774
Pseudomonas thermotolerans DSM 14292	1123021	PRJNA187118	187118	Proteobacteria	Gammaproteobacteria	3.7521	66.8	-	AQPA01	75	3593	3396	4/15/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441073	GCA_000364625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/625/GCA_000364625.1_ASM36462v1	-	DSM 14292
Halorubrum saccharovorum DSM 1137	1227484	PRJNA174920	174920	Euryarchaeota	Halobacteria	3.4237	66.9	-	AOJE01	72	3291	3122	2/4/13	3/29/17	Contig	"University of California, Davis"	SAMN02471663	GCA_000337915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/915/GCA_000337915.1_ASM33791v1	25393412	DSM 1137
Haloferax alexandrinus	114529	PRJEB5511	245002	Euryarchaeota	Halobacteria	3.89363	66	-	CCDK01	5	3833	3735	5/15/14	4/9/17	Scaffold	URMITE	SAMEA3139050	GCA_000723845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/845/GCA_000723845.1_PRJEB5511_assembly_1	-	Arc-Hr
Haloferax prahovense DSM 18310	1227461	PRJNA174906	174906	Euryarchaeota	Halobacteria	3.9988	65.7	-	AOLG01	58	3934	3766	2/4/13	4/17/17	Contig	"University of California, Davis"	SAMN02471666	GCA_000336815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/815/GCA_000336815.1_ASM33681v1	25393412	DSM 18310
Halorubrum aidingense JCM 13560	1230454	PRJNA174910	174910	Euryarchaeota	Halobacteria	3.10853	67.2	-	AOJI01	37	3014	2908	2/4/13	3/29/17	Contig	"University of California, Davis"	SAMN02471664	GCA_000336995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/995/GCA_000336995.1_ASM33699v1	25393412	JCM 13560
Halorubrum arcis JCM 13916	1230455	PRJNA174911	174911	Euryarchaeota	Halobacteria	3.3826	67.3	-	AOJJ01	110	3340	3165	2/4/13	3/29/17	Contig	"University of California, Davis"	SAMN02471647	GCA_000337015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/015/GCA_000337015.1_ASM33701v1	25393412	JCM 13916
Halorubrum californiensis DSM 19288	1227465	PRJNA174912	174912	Euryarchaeota	Halobacteria	3.68287	66.2	-	AOJK01	83	3573	3313	2/4/13	3/29/17	Contig	"University of California, Davis"	SAMN02471648	GCA_000336875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/875/GCA_000336875.1_ASM33687v1	25393412	DSM 19288
Halorubrum coriense DSM 10284	1227466	PRJNA174913	174913	Euryarchaeota	Halobacteria	3.64531	67	-	AOJL01	69	3565	3326	2/4/13	3/29/17	Contig	"University of California, Davis"	SAMN02471634	GCA_000337035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/035/GCA_000337035.1_ASM33703v1	25393412	DSM 10284
Halorubrum distributum JCM 9100	1227467	PRJNA174914	174914	Euryarchaeota	Halobacteria	3.30737	68.1	-	AOJM01	83	3224	3073	2/4/13	3/29/17	Contig	"University of California, Davis"	SAMN02471665	GCA_000337055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/055/GCA_000337055.1_ASM33705v1	25393412	JCM 9100
Halorubrum hochstenium ATCC 700873	1227481	PRJNA174916	174916	Euryarchaeota	Halobacteria	3.03753	69.1	-	AOJO01	64	2970	2857	2/4/13	3/29/17	Contig	"University of California, Davis"	SAMN02471650	GCA_000337075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/075/GCA_000337075.1_ASM33707v1	25393412	ATCC 700873
Halorubrum kocurii JCM 14978	1230456	PRJNA174917	174917	Euryarchaeota	Halobacteria	3.61974	66.9	-	AOJH01	105	3503	3279	2/4/13	3/29/17	Contig	"University of California, Davis"	SAMN02471633	GCA_000337355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/355/GCA_000337355.1_ASM33735v1	25393412	JCM 14978
Halorubrum litoreum JCM 13561	1227483	PRJNA174919	174919	Euryarchaeota	Halobacteria	3.13776	68.9	-	AOJF01	63	3072	2943	2/4/13	4/10/17	Contig	"University of California, Davis"	SAMN02471646	GCA_000337395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/395/GCA_000337395.1_ASM33739v1	25393412	JCM 13561
Halorubrum tebenquichense DSM 14210	1227485	PRJNA174921	174921	Euryarchaeota	Halobacteria	3.32886	68	-	AOJD01	93	3290	3113	2/4/13	4/10/17	Contig	"University of California, Davis"	SAMN02471631	GCA_000337415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/415/GCA_000337415.1_ASM33741v1	25393412	DSM 14210
[Clostridium] celerecrescens	29354	PRJNA255539	255539	Terrabacteria group	Firmicutes	5.03801	43.5	-	JPME01	92	4602	4304	7/22/14	4/17/17	Contig	Agharkar Research Institute	SAMN02925385	GCA_000732605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/605/GCA_000732605.1_CloCel1.0	-	152B
Glomeribacter sp. 1016415	1286373	PRJNA187127	187127	Proteobacteria	Betaproteobacteria	2.63764	48.9	-	AUKK01	8	2205	1969	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440824	GCA_000424705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/705/GCA_000424705.1_ASM42470v1	-	1016415
Ensifer sp. BR816	1057002	PRJNA83955	83955	Proteobacteria	Alphaproteobacteria	6.95153	62.3	-	AQZQ01	3	6619	6241	4/22/13	5/18/17	Scaffold	JGI	SAMN02261311	GCA_000378985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/985/GCA_000378985.1_ASM37898v1	-	BR816
Lysobacter sp. URHA0019	1298861	PRJNA190818	190818	Proteobacteria	Gammaproteobacteria	3.22398	66.8	-	AUEN01	7	3058	2980	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440854	GCA_000426005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/005/GCA_000426005.1_ASM42600v1	-	URHA0019
Haloferax elongans ATCC BAA-1513	1230453	PRJNA174902	174902	Euryarchaeota	Halobacteria	3.95214	61.2	-	AOLK01	27	3915	3776	2/4/13	4/17/17	Contig	"University of California, Davis"	SAMN02471641	GCA_000336755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/755/GCA_000336755.1_ASM33675v1	25393412	ATCC BAA-1513
Opitutaceae bacterium TAV5	794903	PRJNA63271	63271	PVC group	Verrucomicrobia	7.41767	63.4762	chromosome:NZ_CP007053.1/CP007053.1; plasmid unnamed:NZ_CP007054.1/CP007054.1	-	2	5975	5870	1/13/14	4/17/17	Complete Genome	JGI	SAMN02261410	GCA_000242935.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/935/GCA_000242935.3_ASM24293v3	25744998	TAV5
Haloferax larsenii JCM 13917	1227460	PRJNA174904	174904	Euryarchaeota	Halobacteria	3.69795	62	-	AOLI01	36	3674	3535	2/4/13	4/10/17	Contig	"University of California, Davis"	SAMN02471655	GCA_000336955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/955/GCA_000336955.1_ASM33695v1	25393412	JCM 13917
[Clostridium] methoxybenzovorans SR3	1286820	PRJNA187237	187237	Terrabacteria group	Firmicutes	7.08538	44.5	-	ATXD01	14	6563	6350	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440585	GCA_000421505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/505/GCA_000421505.1_ASM42150v1	-	SR3
Pandoraea faecigallinarum	656179	PRJNA286722	286722	Proteobacteria	Betaproteobacteria	5.73266	63.45	chromosome:NZ_CP011807.3/CP011807.3; plasmid unnamed1:NZ_CP011808.2/CP011808.2; plasmid unnamed2:NZ_CP011809.2/CP011809.2	-	3	5107	4816	6/17/15	4/17/17	Complete Genome	University of Malaya	SAMN03769594	GCA_001029105.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/105/GCA_001029105.3_ASM102910v3	-	DSM 23572
Burkholderia sp. RPE67	758796	PRJDB1660	248279	Proteobacteria	Betaproteobacteria	8.68576	63.437	chromosome 1:NZ_AP014576.1/AP014576.1; chromosome 2:NZ_AP014577.1/AP014577.1; chromosome 3:NZ_AP014578.1/AP014578.1; plasmid p1:NZ_AP014579.1/AP014579.1; plasmid p2:NZ_AP014580.1/AP014580.1; plasmid p3:NZ_AP014581.1/AP014581.1	-	6	8184	7850	5/21/14	4/17/17	Complete Genome	National Institute of Advanced Industrial Science and Technology (AIST) Hokkaido	SAMD00000331	GCA_000828875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/875/GCA_000828875.1_ASM82887v1	24948758	RPE67
Paracoccus aminophilus JCM 7686	1367847	PRJNA212980	212980	Proteobacteria	Alphaproteobacteria	4.87312	63.4088	chromosome:NC_022041.1/CP006650.1; plasmid pAMI1:NC_022042.1/CP006651.1; plasmid pAMI4:NC_022049.1/CP006652.1; plasmid pAMI5:NC_022043.1/CP006653.1; plasmid pAMI6:NC_022044.1/CP006654.1; plasmid pAMI8:NC_022050.1/CP006655.1	-	6	4648	4502	8/8/13	4/17/17	Complete Genome	"University of Warsaw, Faculty of Biology, Institute of Microbiology, Department of Bacterial Genetics"	SAMN02604253	GCA_000444995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/995/GCA_000444995.1_ASM44499v1	24517536	JCM 7686
Sphaerotilus natans subsp. natans DSM 6575	1286631	PRJNA230544	230544	Proteobacteria	Betaproteobacteria	4.59282	69.9	-	AZRA01	188	4152	3960	5/12/14	4/9/17	Contig	Gwangju Institute of Science and Technology	SAMN02767310	GCA_000689195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/195/GCA_000689195.1_CLC_Genomics_workbench_5.0	24965827	DSM 6575
Bifidobacterium pseudolongum	1694	PRJNA391001	391001	Terrabacteria group	Actinobacteria	2.0081	63.4	chromosome:NZ_CP022544.1/CP022544.1	-	1	1696	1585	8/31/17	9/2/17	Complete Genome	Institute for Genome Sciences	SAMN07357905	GCA_002282915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/915/GCA_002282915.1_ASM228291v1	-	UMB-MBP-01
Pseudomonas protegens	380021	PRJNA301182	301182	Proteobacteria	Gammaproteobacteria	7.03239	63.4	chromosome:NZ_CP013184.1/CP013184.1	-	1	6430	6278	2/24/17	2/27/17	Complete Genome	Shanghai Jiao Tong University	SAMN04240923	GCA_002006545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/545/GCA_002006545.1_ASM200654v1	-	H78
Micrococcus sp. HMSC067E09	1739367	PRJNA300017	300017	Terrabacteria group	Actinobacteria	2.58621	71.4	-	LTYF01	56	2263	2138	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480031	GCA_001812555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/555/GCA_001812555.1_ASM181255v1	-	HMSC067E09
Brevibacillus borstelensis AK1	1300222	PRJNA191598	191598	Terrabacteria group	Firmicutes	5.15509	52	-	APBN01	29	5100	4870	4/4/13	5/18/17	Contig	King Abdullah University of Science and Technology	SAMN02470130	GCA_000353565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/565/GCA_000353565.1_ASM35356v1	-	AK1
Micromonospora rosaria	47874	PRJNA309758	309758	Terrabacteria group	Actinobacteria	7.38329	73.4	-	LRQV01	310	6518	6109	2/24/16	4/17/17	Contig	Jiangxi Normal University	SAMN04440589	GCA_001567585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/585/GCA_001567585.1_ASM156758v1	-	DSM 803
Cutibacterium avidum	33010	PRJNA339124	339124	Terrabacteria group	Actinobacteria	2.72985	63.4	chromosome:NZ_CP016954.1/CP016954.1	-	1	2505	2312	8/26/16	4/5/17	Complete Genome	University College Cork	SAMN05579890	GCA_001714705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/705/GCA_001714705.1_ASM171470v1	-	DPC 6544
Mycobacterium celatum	28045	PRJDB3515	276988	Terrabacteria group	Actinobacteria	4.66205	66.8	-	BBUN01	1217	4624	3893	2/28/15	4/17/17	Contig	Kyorin University School of Medicine	SAMD00025827	GCA_000974705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/705/GCA_000974705.1_ASM97470v1	-	ATCC 51131
Gordonia westfalica	158898	PRJEB16497	349419	Terrabacteria group	Actinobacteria	6.405	66.9	-	FNLM01	38	6220	5711	10/21/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488548	GCA_900105725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/725/GCA_900105725.1_IMG-taxon_2636416072_annotated_assembly	-	DSM 44215
Arthrobacter sp. ATCC 21022	1771959	PRJNA306041	306041	Terrabacteria group	Actinobacteria	4.4349	63.4	chromosome:NZ_CP014196.1/CP014196.1	-	1	4078	3910	1/28/16	4/11/17	Complete Genome	University of Pittsburgh	SAMN04338418	GCA_001542565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/565/GCA_001542565.1_ASM154256v1	27013048	ATCC 21022
Streptomyces flavovirens	52258	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.67065	71.1	-	JOAB01	97	6856	6542	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645356	GCA_000720395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/395/GCA_000720395.1_ASM72039v1	-	NRRL B-2182
Streptomyces phaeochromogenes	1923	PRJNA293375	293375	Terrabacteria group	Actinobacteria	10.9355	70.2	-	LIQZ01	702	9650	8881	10/28/15	3/12/17	Scaffold	USDA/ARS/NCAUR	SAMN04004087	GCA_001418655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/655/GCA_001418655.1_ASM141865v1	-	NRRL B-1248
Herbaspirillum seropedicae	964	PRJNA287245	287245	Proteobacteria	Betaproteobacteria	5.50972	63.4	chromosome:NZ_CP011930.1/CP011930.1	-	1	4840	4726	6/26/15	4/10/17	Complete Genome	Universidade Federal do Parana	SAMN03779333	GCA_001040945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/040/945/GCA_001040945.1_ASM104094v1	-	Z67
Marinococcus halophilus	1371	PRJNA391828	391828	Terrabacteria group	Firmicutes	3.26162	47.3	-	NPFA01	64	3333	3215	8/22/17	8/24/17	Contig	UC Davis	SAMN07344382	GCA_002265875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/875/GCA_002265875.1_ASM226587v1	-	KCTC 2843
Streptomyces natalensis ATCC 27448	1240678	PRJNA176961	176961	Terrabacteria group	Actinobacteria	8.65173	70.6	-	JRKI01	63	7797	7311	2/27/15	3/11/17	Contig	IBMC - Institute for Molecular and Cell Biology	SAMN03074232	GCA_000935125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/125/GCA_000935125.1_SNA_1.0	26256439	ATCC 27448
Paracoccus pantotrophus J46	935565	PRJNA202363	202363	Proteobacteria	Alphaproteobacteria	4.65886	67.4	-	JAEM01	104	4619	4346	1/10/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02584957	GCA_000518905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/905/GCA_000518905.1_ASM51890v1	-	J46
Pseudomonas mosselii SJ10	1388763	PRJNA215706	215706	Proteobacteria	Gammaproteobacteria	6.24786	63.4	chromosome:NZ_CP009365.1/CP009365.1	-	1	5803	5579	9/12/14	4/9/17	Complete Genome	Kyungpook national university	SAMN02470220	GCA_000498975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/975/GCA_000498975.2_ASM49897v2	25449545	SJ10
Aeromonas bestiarum	105751	PRJEB7022	267794	Proteobacteria	Gammaproteobacteria	4.69082	60.6	-	CDDA01	41	4232	4075	11/24/14	4/17/17	Scaffold	UCONNMISEQ	SAMEA2752425	GCA_000819745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/745/GCA_000819745.1_PRJEB7022	-	CECT 4227
Streptomyces lavendulae	1914	PRJNA238534	238534	Terrabacteria group	Actinobacteria	6.21125	71.4	-	JNXL01	1878	5982	4854	7/1/14	8/21/17	Scaffold	University of Illinois	SAMN02645286	GCA_000715625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/625/GCA_000715625.1_ASM71562v1	-	Fujisawa #8006
Streptomyces rochei	1928	PRJNA293375	293375	Terrabacteria group	Actinobacteria	7.6824	72.5	-	MUMD01	808	6981	6241	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06291437	GCA_002155895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/895/GCA_002155895.1_ASM215589v1	-	NRRL B-2410
Corynebacterium renale	1724	PRJNA284943	284943	Terrabacteria group	Actinobacteria	2.32276	59.1	-	LDYE01	11	2235	1772	7/1/15	4/17/17	Contig	Universidade Federal do Para	SAMN03734646	GCA_001044175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/175/GCA_001044175.1_ASM104417v1	26958092	CIP 52.96
Pseudomonas protegens CHA0	1124983	PRJNA78307	78307	Proteobacteria	Gammaproteobacteria	6.86798	63.4	chromosome:NC_021237.1/CP003190.1	-	1	6251	6119	5/16/13	4/1/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02603271	GCA_000397205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/205/GCA_000397205.1_ASM39720v1	-	CHA0
Methylocystis sp. SC2	187303	PRJEB120	173412	Proteobacteria	Alphaproteobacteria	3.77344	63.4	chromosome I:NC_018485.1/HE956757.1	-	1	3677	3583	8/20/12	4/17/17	Complete Genome	Max Planck Institute for Terrestrial Microbiology	SAMEA2272070	GCA_000304315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/315/GCA_000304315.1_Msp_SC2	23045511	SC2
Haloarcula amylolytica JCM 13557	1227452	PRJNA174891	174891	Euryarchaeota	Halobacteria	4.22542	62.1	-	AOLW01	81	4199	3988	2/4/13	5/18/17	Contig	"University of California, Davis"	SAMN02471637	GCA_000336615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/615/GCA_000336615.1_ASM33661v1	25393412	JCM 13557
Haloarcula argentinensis DSM 12282	1230451	PRJNA174892	174892	Euryarchaeota	Halobacteria	4.14711	61.1	-	AOLX01	33	4144	3981	2/4/13	5/18/17	Contig	"University of California, Davis"	SAMN02471678	GCA_000336895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/895/GCA_000336895.1_ASM33689v1	25393412	DSM 12282
Haloarcula japonica DSM 6131	1227453	PRJNA174893	174893	Euryarchaeota	Halobacteria	4.28036	61.2	-	AOLY01	48	4270	4057	2/4/13	5/18/17	Contig	"University of California, Davis"	SAMN02471638	GCA_000336635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/635/GCA_000336635.1_ASM33663v1	25393412	DSM 6131
Halobiforma nitratireducens JCM 10879	1227454	PRJNA174895	174895	Euryarchaeota	Halobacteria	3.68875	63.7	-	AOMA01	205	3585	3286	2/4/13	4/17/17	Contig	"University of California, Davis"	SAMN02471660	GCA_000337895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/895/GCA_000337895.1_ASM33789v1	25393412	JCM 10879
Halococcus saccharolyticus DSM 5350	1227455	PRJNA174898	174898	Euryarchaeota	Halobacteria	3.4497	64	-	AOMD01	36	3488	3325	2/4/13	3/29/17	Contig	"University of California, Davis"	SAMN02471639	GCA_000336915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/915/GCA_000336915.1_ASM33691v1	25393412	DSM 5350
Halococcus salifodinae DSM 8989	1227456	PRJNA174899	174899	Euryarchaeota	Halobacteria	4.19978	63.4	-	AOME01	109	4121	3814	2/4/13	5/18/17	Contig	"University of California, Davis"	SAMN02471636	GCA_000336935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/935/GCA_000336935.1_ASM33693v1	25393412	DSM 8989
Halococcus thailandensis JCM 13552	1227457	PRJNA174900	174900	Euryarchaeota	Halobacteria	4.05243	61.8	-	AOMF01	198	4092	3750	2/4/13	3/29/17	Contig	"University of California, Davis"	SAMN02471640	GCA_000336715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/715/GCA_000336715.1_ASM33671v1	25393412	JCM 13552
Frateuria aurantia DSM 6220	767434	PRJNA64505	64505	Proteobacteria	Gammaproteobacteria	3.60346	63.4	chromosome:NC_017033.1/CP003350.1	-	1	3262	3123	3/2/12	4/17/17	Complete Genome	JGI	SAMN02261415	GCA_000242255.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/255/GCA_000242255.3_ASM24225v3	-	DSM 6220
Herbaspirillum seropedicae SmR1	757424	PRJNA47945	47945	Proteobacteria	Betaproteobacteria	5.51389	63.4	chromosome:NC_014323.1/CP002039.1	-	1	4843	4711	7/2/10	5/18/17	Complete Genome	GENOPAR	SAMN02603247	GCA_000143225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/143/225/GCA_000143225.1_ASM14322v1	-	SmR1
Pseudonocardia autotrophica	2074	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.02384	73.5	-	JNYD01	153	7504	7240	7/1/14	4/9/17	Contig	University of Illinois	SAMN02645304	GCA_000717175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/175/GCA_000717175.1_ASM71717v1	-	NRRL B-16064
Arcanobacterium sp. S3PF19	1219585	PRJNA187462	187462	Terrabacteria group	Actinobacteria	1.49026	55.8	-	JRMX01	15	1336	1264	9/26/14	4/17/17	Contig	JCVI	SAMN02850927	GCA_000758825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/825/GCA_000758825.1_04_NF40_HMP1631v01	-	S3PF19
Lachnoanaerobaculum sp. OBRC5-5	936595	PRJNA78963	78963	Terrabacteria group	Firmicutes	2.93212	36.7	-	ALOA01	7	2724	2577	9/12/12	4/17/17	Scaffold	Broad Institute	SAMN02463955	GCA_000296385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/385/GCA_000296385.1_Clos_bact_OBRC5-5_V1	-	OBRC5-5
Peptostreptococcus sp. MV1	1219626	PRJNA187470	187470	Terrabacteria group	Firmicutes	1.98169	36.6	-	JRNB01	121	1771	1695	9/26/14	4/17/17	Contig	JCVI	SAMN02850935	GCA_000758885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/885/GCA_000758885.1_04_NF40_HMP1639v01	-	MV1
Corynebacterium freneyi DNF00450	1287475	PRJNA187522	187522	Terrabacteria group	Actinobacteria	3.04232	68.8	-	JRNE01	90	2676	2542	9/26/14	4/17/17	Contig	JCVI	SAMN02850946	GCA_000758965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/965/GCA_000758965.1_04_NF_x40_HMP1650v01	-	DNF00450
Brachyspira hampsonii 30446	1289135	PRJNA169353	169353	Spirochaetes	Spirochaetia	3.03735	27.6	-	ALNZ01	4	2633	2502	12/3/12	4/8/17	Scaffold	University of Saskatchewan	SAMN01096567	GCA_000316195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/195/GCA_000316195.1_ASM31619v1	-	30446
Paraburkholderia bryophila 376MFSha3.1	1169143	PRJNA187936	187936	Proteobacteria	Betaproteobacteria	7.38182	61.9	-	ARSZ01	32	6599	6414	4/26/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440516	GCA_000383275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/275/GCA_000383275.1_ASM38327v1	-	376MFSha3.1
Terracoccus sp. 273MFTsu3.1	1172188	PRJNA187938	187938	Terrabacteria group	Actinobacteria	4.93873	71.5	-	ARTT01	18	4575	4461	4/26/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440959	GCA_000383675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/675/GCA_000383675.1_ASM38367v1	-	273MFTsu3.1
Cryocola sp. 340MFSha3.1	1169145	PRJNA187939	187939	Terrabacteria group	Actinobacteria	4.09061	69.9	-	ARTB01	2	3913	3846	4/26/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440964	GCA_000383315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/315/GCA_000383315.1_ASM38331v1	-	340MFSha3.1
Promicromonospora sukumoe 327MFSha3.1	1172178	PRJNA187946	187946	Terrabacteria group	Actinobacteria	6.25358	72.8	-	ARQM01	18	5537	5413	4/26/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440969	GCA_000385135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/135/GCA_000385135.1_ASM38513v1	-	327MFSha3.1
Streptomyces canus 299MFChir4.1	1172183	PRJNA187948	187948	Terrabacteria group	Actinobacteria	10.48	70.4	-	ARTQ01	116	9718	8937	4/26/13	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440519	GCA_000383615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/615/GCA_000383615.1_ASM38361v1	-	299MFChir4.1
Erwinia toletana DAPP-PG 735	1274722	PRJNA184384	184384	Proteobacteria	Gammaproteobacteria	5.27286	53.6	-	AOCZ01	20	4884	4718	2/1/13	5/18/17	Scaffold	University of Exeter	SAMN02471729	GCA_000336255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/255/GCA_000336255.1_v1.0	23661482	DAPP-PG 735
Arenibacter latericius DSM 15913	1121012	PRJNA188327	188327	FCB group	Bacteroidetes/Chlorobi group	4.48017	36.8	-	AUKX01	104	3733	3567	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440812	GCA_000424985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/985/GCA_000424985.1_ASM42498v1	-	DSM 15913
Streptococcus castoreus DSM 17536	1123299	PRJNA188329	188329	Terrabacteria group	Firmicutes	1.88354	37.8	-	AUKZ01	42	1837	1678	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441486	GCA_000425025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/025/GCA_000425025.1_ASM42502v1	-	DSM 17536
Leifsonia sp. 197AMF	1798217	PRJEB15927	348258	Terrabacteria group	Actinobacteria	4.14128	69.8	chromosome I:NZ_LT629694.1/LT629694.1	-	1	3979	3906	10/20/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04515690	GCA_900099795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/795/GCA_900099795.1_IMG-taxon_2639762662_annotated_assembly	-	197AMF
Meiothermus ruber DSM 1279	504728	PRJNA28827	28827	Terrabacteria group	Deinococcus-Thermus	3.09746	63.4	chromosome:NC_013946.1/CP001743.1	-	1	3098	3023	3/3/10	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002601	GCA_000024425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/425/GCA_000024425.1_ASM2442v1	21304689	-
Aeromonas sobria	646	PRJNA344548	344548	Proteobacteria	Gammaproteobacteria	4.69125	57.6	-	MKFU01	52	4278	4089	11/1/16	4/13/17	Scaffold	Fisheries Research Institute of Fujian Province	SAMN05828312	GCA_001858225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/225/GCA_001858225.1_ASM185822v1	-	8005
Arthrobacter sp. ZXY-2	1806905	PRJNA341911	341911	Terrabacteria group	Actinobacteria	5.05871	63.3535	chromosome:NZ_CP017421.1/CP017421.1; plasmid pZXY21:NZ_CP017422.1/CP017422.1; plasmid pZXY22:NZ_CP017423.1/CP017423.1; plasmid pZXY23:NZ_CP017424.1/CP017424.1; plasmid pZXY24:NZ_CP017425.1/CP017425.1; plasmid pZXY25:NZ_CP017426.1/CP017426.1	-	6	4700	4505	10/26/16	4/17/17	Complete Genome	Harbin Institute of Technology	SAMN05730155	GCA_001854365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/365/GCA_001854365.1_ASM185436v1	-	ZXY-2
Deinococcus wulumuqiensis R13	1403343	PRJNA221117	221117	Terrabacteria group	Deinococcus-Thermus	3.28878	66.5	-	AXLL01	298	3145	2986	10/22/13	4/9/17	Contig	Nanjing University of Technology	SAMN02470569	GCA_000478785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/785/GCA_000478785.1_R13	24309735	R13
Burkholderia sp. CCGE1001	640510	PRJNA37717	37717	Proteobacteria	Betaproteobacteria	7.25349	63.3458	chromosome 1:NC_015136.1/CP002519.1; chromosome 2:NC_015137.1/CP002520.1; plasmid pCCGE1001a:NZ_CP012899.1/CP012899.1	-	3	6500	6236	2/14/11	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713584	GCA_000176935.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/935/GCA_000176935.3_ASM17693v3	-	CCGE1001
Arcticibacter svalbardensis MN12-7	1150600	PRJNA187918	187918	FCB group	Bacteroidetes/Chlorobi group	4.68769	38.2	-	AQPN01	149	4104	3898	5/29/13	4/17/17	Contig	Centre for Cellular and Molecular Biology	SAMN02469442	GCA_000403135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/135/GCA_000403135.1_ArSv1	23846277	MN12-7
Pseudomonas cannabina	86840	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.91654	58.7	-	LJPX01	702	5678	4998	10/20/15	4/11/17	Scaffold	University of Toronto	SAMN03976291	GCA_001400175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/175/GCA_001400175.1_PcbICMP2823	-	ICMP2823
Actinokineospora inagensis DSM 44258	1120935	PRJNA188797	188797	Terrabacteria group	Actinobacteria	7.27876	70.2	-	AXWW01	98	6363	6067	10/25/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441427	GCA_000482865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/865/GCA_000482865.1_ASM48286v1	-	DSM 44258
Actinomadura rifamycini DSM 43936	1120937	PRJNA188798	188798	Terrabacteria group	Actinobacteria	8.38543	74.1	-	AULB01	75	7611	7324	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441154	GCA_000425065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/065/GCA_000425065.1_ASM42506v1	-	DSM 43936
Pannonibacter phragmitetus	121719	PRJNA298840	298840	Proteobacteria	Alphaproteobacteria	5.6697	63.3371	chromosome:NZ_CP013068.1/CP013068.1; plasmid p.p-1:NZ_CP013069.1/CP013069.1	-	2	5178	5030	1/4/16	4/11/17	Complete Genome	School of biomedical sciences	SAMN04158710	GCA_001484065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/065/GCA_001484065.1_ASM148406v1	-	31801
Aestuariimicrobium kwangyangense DSM 21549	1120954	PRJNA188800	188800	Terrabacteria group	Actinobacteria	2.99015	68.5	-	ATXE01	5	2666	2582	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440892	GCA_000421525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/525/GCA_000421525.1_ASM42152v1	-	DSM 21549
Agrococcus lahaulensis DSM 17612	1120958	PRJNA188801	188801	Terrabacteria group	Actinobacteria	2.67784	72.5	-	AULD01	13	2656	2552	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440814	GCA_000425105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/105/GCA_000425105.1_ASM42510v1	-	DSM 17612
Paenibacillus taiwanensis DSM 18679	1122926	PRJNA188802	188802	Terrabacteria group	Firmicutes	5.24765	44.8	-	AULE01	20	4626	4458	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440680	GCA_000425125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/125/GCA_000425125.1_ASM42512v1	-	DSM 18679
Pedobacter glucosidilyticus DSM 23534	540906	PRJNA188803	188803	FCB group	Bacteroidetes/Chlorobi group	4.02102	34.4	-	AULF01	62	3485	3337	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440815	GCA_000425145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/145/GCA_000425145.1_ASM42514v1	-	DSM 23534
Ralstonia pickettii 12D	428406	PRJNA18937	18937	Proteobacteria	Betaproteobacteria	5.68536	63.3352	chromosome 1:NC_012856.1/CP001644.1; chromosome 2:NC_012857.1/CP001645.1; plasmid pRp12D01:NC_012855.1/CP001646.1; plasmid pRp12D02:NC_012849.1/CP001647.1; plasmid pRp12D03:NC_012851.1/CP001648.1	-	5	5500	5305	6/22/09	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000034	GCA_000023425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/425/GCA_000023425.1_ASM2342v1	-	12D
Photobacterium halotolerans DSM 18316	1122959	PRJNA188804	188804	Proteobacteria	Gammaproteobacteria	4.69017	50.9	-	AULG01	53	4291	4142	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441155	GCA_000425165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/165/GCA_000425165.1_ASM42516v1	-	DSM 18316
Pleomorphomonas koreensis DSM 23070	1122962	PRJNA188805	188805	Proteobacteria	Alphaproteobacteria	4.62065	67.2	-	AULH01	73	4302	4130	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440681	GCA_000425185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/185/GCA_000425185.1_ASM42518v1	-	DSM 23070
Pontibacillus halophilus JSM 076056 = DSM 19796	1385510	PRJNA188806	188806	Terrabacteria group	Firmicutes	3.67055	42.7	-	AULI01	36	3740	3612	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441140	GCA_000425205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/205/GCA_000425205.1_ASM42520v1	-	DSM 19796
Pontibacillus marinus BH030004 = DSM 16465	1385511	PRJNA188807	188807	Terrabacteria group	Firmicutes	4.27697	38.5	-	AULJ01	77	4246	4135	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440682	GCA_000425225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/225/GCA_000425225.1_ASM42522v1	-	DSM 16465
Prevotella corporis DSM 18810 = JCM 8529	1122981	PRJNA188808	188808	FCB group	Bacteroidetes/Chlorobi group	2.80021	44.1	-	AUME01	84	2469	2282	7/15/13	4/6/17	Scaffold	DOE Joint Genome Institute	SAMN02441145	GCA_000430525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/525/GCA_000430525.1_ASM43052v1	-	DSM 18810
Agromyces italicus DSM 16388	1120959	PRJNA188809	188809	Terrabacteria group	Actinobacteria	3.7305	70.2	-	ATXF01	12	3416	3284	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441581	GCA_000421545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/545/GCA_000421545.1_ASM42154v1	-	DSM 16388
Tenacibaculum ovolyticum DSM 18103	1123347	PRJNA188811	188811	FCB group	Bacteroidetes/Chlorobi group	4.12446	29.6	-	AUMF01	34	3683	3555	7/15/13	4/6/17	Scaffold	DOE Joint Genome Institute	SAMN02441146	GCA_000430545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/545/GCA_000430545.1_ASM43054v1	-	DSM 18103
Agromyces subbeticus DSM 16689	1120960	PRJNA188814	188814	Terrabacteria group	Actinobacteria	4.30392	69.1	-	ATXG01	34	3971	3837	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441229	GCA_000421565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/565/GCA_000421565.1_ASM42156v1	-	DSM 16689
Alicyclobacillus herbarius DSM 13609	1120972	PRJNA188815	188815	Terrabacteria group	Firmicutes	3.31051	57.2	-	AUMH01	57	3210	3011	7/15/13	4/6/17	Scaffold	DOE Joint Genome Institute	SAMN02440806	GCA_000430585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/585/GCA_000430585.1_ASM43058v1	-	DSM 13609
Anaeroarcus burkinensis DSM 6283	1120985	PRJNA188816	188816	Terrabacteria group	Firmicutes	3.33846	49	-	AUMI01	20	3174	3060	7/15/13	4/6/17	Scaffold	DOE Joint Genome Institute	SAMN02441147	GCA_000430605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/605/GCA_000430605.1_ASM43060v1	-	DSM 6283
Anaerobiospirillum succiniciproducens DSM 6400	1120988	PRJNA188817	188817	Proteobacteria	Gammaproteobacteria	3.80474	43.6	-	AXWV01	155	2309	2136	10/25/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440755	GCA_000482845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/845/GCA_000482845.1_ASM48284v1	-	DSM 6400
Aneurinibacillus terranovensis DSM 18919	1121002	PRJNA188818	188818	Terrabacteria group	Firmicutes	4.24767	44.9	-	AUMJ01	98	4261	3953	7/15/13	4/6/17	Scaffold	DOE Joint Genome Institute	SAMN02440807	GCA_000430625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/625/GCA_000430625.1_ASM43062v1	-	DSM 18919
Aquimarina latercula DSM 2041	1121006	PRJNA188819	188819	FCB group	Bacteroidetes/Chlorobi group	6.24525	32.2	-	AUMK01	28	5485	5376	7/15/13	4/6/17	Scaffold	DOE Joint Genome Institute	SAMN02440808	GCA_000430645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/645/GCA_000430645.1_ASM43064v1	-	DSM 2041
Aquimarina muelleri DSM 19832	1121007	PRJNA188820	188820	FCB group	Bacteroidetes/Chlorobi group	4.90322	31.4	-	AUML01	101	4077	3893	7/15/13	4/6/17	Scaffold	DOE Joint Genome Institute	SAMN02441476	GCA_000430665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/665/GCA_000430665.1_ASM43066v1	-	DSM 19832
Thermodesulfatator atlanticus DSM 21156	1123371	PRJNA188821	188821	Thermodesulfobacteria	Thermodesulfobacteria	2.30228	45	-	ATXH01	60	2288	2184	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440586	GCA_000421585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/585/GCA_000421585.1_ASM42158v1	-	DSM 21156
Thermodesulfobacterium thermophilum DSM 1276	1123373	PRJNA188822	188822	Thermodesulfobacteria	Thermodesulfobacteria	1.78738	37.1	-	ATXI01	46	1812	1709	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441582	GCA_000421605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/605/GCA_000421605.1_ASM42160v1	-	DSM 1276
Thermodesulfovibrio islandicus DSM 12570	1123375	PRJNA188823	188823	Nitrospirae	Nitrospira	2.04887	34.3	-	AXWU01	20	2142	2042	10/25/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440754	GCA_000482825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/825/GCA_000482825.1_ASM48282v1	-	DSM 12570
Thermus islandicus DSM 21543	1123389	PRJNA188824	188824	Terrabacteria group	Deinococcus-Thermus	2.26301	68.4	-	ATXJ01	67	2439	2232	7/9/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441230	GCA_000421625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/625/GCA_000421625.1_ASM42162v1	-	DSM 21543
Tuberibacillus calidus DSM 17572	1123405	PRJNA188825	188825	Terrabacteria group	Firmicutes	3.24201	44	-	AUMM01	81	3245	3054	7/15/13	4/6/17	Scaffold	DOE Joint Genome Institute	SAMN02440688	GCA_000430685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/685/GCA_000430685.1_ASM43068v1	-	DSM 17572
Arthrobacter castelli DSM 16402	1121019	PRJNA188828	188828	Terrabacteria group	Actinobacteria	4.5858	63.6	-	AUMN01	49	4422	4202	7/15/13	4/6/17	Scaffold	DOE Joint Genome Institute	SAMN02441477	GCA_000430705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/705/GCA_000430705.1_ASM43070v1	-	DSM 16402
Aurantimonas coralicida DSM 14790	1121027	PRJNA188829	188829	Proteobacteria	Alphaproteobacteria	4.61565	66.7	-	ATXK01	38	4359	4198	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441568	GCA_000421645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/645/GCA_000421645.1_ASM42164v1	-	DSM 14790
Caldicellulosiruptor acetigenus DSM 7040	1121259	PRJNA188850	188850	Terrabacteria group	Firmicutes	2.58996	36.1	-	ATXO01	37	2481	2328	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440894	GCA_000421725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/725/GCA_000421725.1_ASM42172v1	-	DSM 7040
Chitinilyticum aquatile DSM 21506	1121275	PRJNA188851	188851	Proteobacteria	Betaproteobacteria	3.68555	60.3	-	AUMS01	28	3520	3392	7/15/13	4/6/17	Scaffold	DOE Joint Genome Institute	SAMN02440690	GCA_000430805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/805/GCA_000430805.1_ASM43080v1	-	DSM 21506
Chryseobacterium daeguense DSM 19388	1121286	PRJNA188852	188852	FCB group	Bacteroidetes/Chlorobi group	4.21456	36.1	-	AUMT01	25	4007	3855	7/15/13	4/6/17	Scaffold	DOE Joint Genome Institute	SAMN02441479	GCA_000430825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/825/GCA_000430825.1_ASM43082v1	-	DSM 19388
Chryseobacterium gregarium DSM 19109	1121287	PRJNA188853	188853	FCB group	Bacteroidetes/Chlorobi group	4.43938	39.3	-	AUMU01	42	4068	3933	7/15/13	4/6/17	Scaffold	DOE Joint Genome Institute	SAMN02440691	GCA_000430845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/845/GCA_000430845.1_ASM43084v1	-	DSM 19109
Chryseobacterium palustre DSM 21579	1121288	PRJNA188854	188854	FCB group	Bacteroidetes/Chlorobi group	2.98233	41.5	-	AULL01	18	2718	2638	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440683	GCA_000422265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/265/GCA_000422265.1_ASM42226v1	-	DSM 21579
Gryllotalpicola ginsengisoli DSM 22003	1121372	PRJNA188856	188856	Terrabacteria group	Actinobacteria	2.94498	70.9	-	AULK01	23	2792	2668	7/9/13	4/6/17	Scaffold	DOE Joint Genome Institute	SAMN02441141	GCA_000419445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/445/GCA_000419445.1_ASM41944v1	-	DSM 22003
Deinococcus ficus DSM 19119	1121379	PRJNA188857	188857	Terrabacteria group	Deinococcus-Thermus	4.14456	70	-	AUMV01	38	4022	3888	7/15/13	4/6/17	Scaffold	DOE Joint Genome Institute	SAMN02441464	GCA_000430865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/865/GCA_000430865.1_ASM43086v1	-	DSM 19119
Deinococcus murrayi DSM 11303	1121383	PRJNA188858	188858	Terrabacteria group	Deinococcus-Thermus	2.76761	69.4	-	AXWT01	53	2710	2570	10/25/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440753	GCA_000482805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/805/GCA_000482805.1_ASM48280v1	-	DSM 11303
Derxia gummosa DSM 723	1121388	PRJNA188859	188859	Proteobacteria	Betaproteobacteria	5.18517	69.9	-	AXWS01	15	4379	4263	10/25/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440752	GCA_000482785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/785/GCA_000482785.1_ASM48278v1	-	DSM 723
Desulfatiglans anilini DSM 4660	1121399	PRJNA188860	188860	Proteobacteria	delta/epsilon subdivisions	4.66734	58.8	-	AULM01	107	4114	3943	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441472	GCA_000422285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/285/GCA_000422285.1_ASM42228v1	-	DSM 4660
Desulfobacterium vacuolatum DSM 3385	1121400	PRJEB20333	382098	Proteobacteria	delta/epsilon subdivisions	5.0358	46.5	-	FWXY01	80	4190	4050	4/8/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02746065	GCA_900176365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/365/GCA_900176365.1_IMG-taxon_2681813565_annotated_assembly	-	DSM 3385
Desulfotomaculum alcoholivorax DSM 16058	1121422	PRJNA188862	188862	Terrabacteria group	Firmicutes	3.47105	46.9	-	AUMW01	64	3513	3326	7/15/13	4/6/17	Scaffold	DOE Joint Genome Institute	SAMN02440796	GCA_000430885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/885/GCA_000430885.1_ASM43088v1	-	DSM 16058
Luteimonas mephitis DSM 12574	1122183	PRJNA188863	188863	Proteobacteria	Gammaproteobacteria	3.41601	68.5	-	AULN01	18	3060	2967	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440816	GCA_000422305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/305/GCA_000422305.1_ASM42230v1	-	DSM 12574
Marinospirillum minutulum DSM 6287	1122212	PRJNA188864	188864	Proteobacteria	Gammaproteobacteria	2.83607	43.1	-	AULO01	14	2675	2571	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440684	GCA_000422325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/325/GCA_000422325.1_ASM42232v1	-	DSM 6287
Meiothermus taiwanensis DSM 14542	1122222	PRJNA188865	188865	Terrabacteria group	Deinococcus-Thermus	3.02062	63.5	-	AXWR01	72	3007	2824	10/25/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440751	GCA_000482765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/765/GCA_000482765.1_ASM48276v1	-	DSM 14542
Azohydromonas australica DSM 1124	1121030	PRJNA188830	188830	Proteobacteria	Betaproteobacteria	8.78678	68.7	-	AUMO01	142	7814	7374	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441136	GCA_000430725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/725/GCA_000430725.1_ASM43072v1	-	DSM 1124
Fictibacillus gelatini DSM 15865	1121091	PRJNA188831	188831	Terrabacteria group	Firmicutes	4.17122	41.4	-	AUMP01	69	4356	4099	7/15/13	4/6/17	Scaffold	DOE Joint Genome Institute	SAMN02441478	GCA_000430745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/745/GCA_000430745.1_ASM43074v1	-	DSM 15865
Bacillus kribbensis DSM 17871	1121092	PRJNA188832	188832	Terrabacteria group	Firmicutes	5.05227	43	-	AUMQ01	38	5017	4753	7/15/13	4/6/17	Scaffold	DOE Joint Genome Institute	SAMN02440689	GCA_000430765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/765/GCA_000430765.1_ASM43076v1	-	DSM 17871
Bacillus panaciterrae DSM 19096	1121093	PRJNA188833	188833	Terrabacteria group	Firmicutes	5.41169	40.6	-	AUMR01	189	5357	4959	7/15/13	4/6/17	Scaffold	DOE Joint Genome Institute	SAMN02440795	GCA_000430785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/785/GCA_000430785.1_ASM43078v1	-	DSM 19096
Bifidobacterium minimum	1693	PRJNA239853	239853	Terrabacteria group	Actinobacteria	1.89286	62.7	-	JGZD01	18	1591	1434	8/18/14	4/9/17	Contig	University of Parma	SAMN02673441	GCA_000741645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/645/GCA_000741645.1_Bifmin	"2,508,549,325,107,960"	LMG 11592
Erythrobacter flavus	192812	PRJNA394988	394988	Proteobacteria	Alphaproteobacteria	3.18431	63.3	chromosome:NZ_CP022528.1/CP022528.1	-	1	3130	3000	7/31/17	8/3/17	Complete Genome	King Abdullah University of Science and Technology	SAMN07372063	GCA_002237615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/615/GCA_002237615.1_ASM223761v1	-	VG1
Methanocorpusculum bavaricum DSM 4179	1122230	PRJNA188868	188868	Euryarchaeota	Methanomicrobia	1.70678	51.4	-	AUMX01	27	1773	1689	7/15/13	4/6/17	Scaffold	DOE Joint Genome Institute	SAMN02441137	GCA_000430905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/905/GCA_000430905.1_ASM43090v1	-	DSM 4179
Microbacterium indicum DSM 19969	1122238	PRJNA188869	188869	Terrabacteria group	Actinobacteria	2.80996	71.4	-	AULR01	28	2684	2551	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440686	GCA_000422385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/385/GCA_000422385.1_ASM42238v1	-	DSM 19969
Microbacterium luticocti DSM 19459	1122239	PRJNA188870	188870	Terrabacteria group	Actinobacteria	3.11587	70.7	-	AULS01	27	2850	2731	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440801	GCA_000422405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/405/GCA_000422405.1_ASM42240v1	-	DSM 19459
Nesterenkonia alba DSM 19423	1122602	PRJNA188871	188871	Terrabacteria group	Actinobacteria	2.59187	63.7	-	ATXP01	36	2385	2258	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440588	GCA_000421745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/745/GCA_000421745.1_ASM42174v1	-	DSM 19423
Oceanospirillum beijerinckii DSM 7166	1122616	PRJNA188872	188872	Proteobacteria	Gammaproteobacteria	5.32532	47.9	-	AULT01	99	4567	4337	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441143	GCA_000422425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/425/GCA_000422425.1_ASM42242v1	-	DSM 7166
Paenibacillus assamensis DSM 18201	1122916	PRJNA188873	188873	Terrabacteria group	Firmicutes	5.02797	43.3	-	AULU01	32	4445	4284	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441144	GCA_000422445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/445/GCA_000422445.1_ASM42244v1	-	DSM 18201
Paenibacillus harenae DSM 16969	1122920	PRJNA188874	188874	Terrabacteria group	Firmicutes	6.96842	50.7	-	AULV01	28	6280	6041	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441473	GCA_000422465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/465/GCA_000422465.1_ASM42246v1	-	DSM 16969
Paenibacillus pasadenensis DSM 19293	1122923	PRJNA188875	188875	Terrabacteria group	Firmicutes	5.71418	63.2	-	AULW01	49	4930	4748	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440802	GCA_000422485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/485/GCA_000422485.1_ASM42248v1	-	DSM 19293
Paenibacillus pinihumi DSM 23905 = JCM 16419	1122924	PRJNA188876	188876	Terrabacteria group	Firmicutes	6.76058	48.6	-	AULX01	45	6038	5818	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440803	GCA_000422505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/505/GCA_000422505.1_ASM42250v1	-	DSM 23905
Flavobacterium denitrificans DSM 15936	1121888	PRJNA188893	188893	FCB group	Bacteroidetes/Chlorobi group	4.82348	34	-	AUDL01	24	4155	4053	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441540	GCA_000425445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/445/GCA_000425445.1_ASM42544v1	-	DSM 15936
Flavobacterium filum DSM 17961	1121889	PRJNA188894	188894	FCB group	Bacteroidetes/Chlorobi group	3.19209	33.8	-	AUDM01	50	2866	2763	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440630	GCA_000425465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/465/GCA_000425465.1_ASM42546v1	-	DSM 17961
Flavobacterium tegetincola DSM 22377	1121901	PRJNA188895	188895	FCB group	Bacteroidetes/Chlorobi group	3.77454	35	-	AUDN01	41	3381	3257	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440861	GCA_000425485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/485/GCA_000425485.1_ASM42548v1	-	DSM 22377
Flavobacterium frigidarium DSM 17623	1121890	PRJNA188896	188896	FCB group	Bacteroidetes/Chlorobi group	3.63104	34.1	-	AUDO01	36	3170	3058	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440631	GCA_000425505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/505/GCA_000425505.1_ASM42550v1	-	DSM 17623
Ruminococcus gauvreauii DSM 19829	1123075	PRJNA188897	188897	Terrabacteria group	Firmicutes	4.09471	47.6	-	AUDP01	70	3858	3685	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441541	GCA_000425525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/525/GCA_000425525.1_ASM42552v1	-	DSM 19829
Tepidiphilus margaritifer DSM 15129	1123354	PRJNA188900	188900	Proteobacteria	Hydrogenophilalia	2.22024	64.8	-	AUDR01	19	2157	2067	7/10/13	6/20/17	Scaffold	DOE Joint Genome Institute	SAMN02440862	GCA_000425565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/565/GCA_000425565.1_ASM42556v1	-	DSM 15129
Terrimonas ferruginea DSM 30193	1123356	PRJNA188901	188901	FCB group	Bacteroidetes/Chlorobi group	4.68615	48.1	-	AUDS01	30	4006	3898	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440863	GCA_000425585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/585/GCA_000425585.1_ASM42558v1	-	DSM 30193
Gaetbulibacter saemankumensis DSM 17032	1121909	PRJNA188904	188904	FCB group	Bacteroidetes/Chlorobi group	3.08915	34.3	-	AUDV01	11	2685	2616	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441528	GCA_000425645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/645/GCA_000425645.1_ASM42564v1	-	DSM 17032
Gemella cuniculi DSM 15828	1121914	PRJNA188905	188905	Terrabacteria group	Firmicutes	1.86968	29	-	AUDW01	31	1698	1569	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440633	GCA_000425665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/665/GCA_000425665.1_ASM42566v1	-	DSM 15828
Glycomyces arizonensis DSM 44726	1121926	PRJNA188906	188906	Terrabacteria group	Actinobacteria	5.04858	70.1	-	AXWO01	49	4597	4413	10/25/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441107	GCA_000482705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/705/GCA_000482705.1_ASM48270v1	-	DSM 44726
Gulosibacter molinativorax DSM 13485	1121934	PRJNA188907	188907	Terrabacteria group	Actinobacteria	3.37913	64.3	-	AUDX01	79	3175	3000	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441529	GCA_000425685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/685/GCA_000425685.1_ASM42568v1	-	DSM 13485
Halobacillus kuroshimensis DSM 18393	1121938	PRJNA188908	188908	Terrabacteria group	Firmicutes	3.84557	47	-	AUDY01	15	3956	3858	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441195	GCA_000425705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/705/GCA_000425705.1_ASM42570v1	-	DSM 18393
Halomonas halocynthiae DSM 14573	1121940	PRJNA188909	188909	Proteobacteria	Gammaproteobacteria	2.87647	53.8	-	AUDZ01	12	2710	2611	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440634	GCA_000425725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/725/GCA_000425725.1_ASM42572v1	-	DSM 14573
Halorubrum ezzemoulense DSM 17463	1121945	PRJNA188910	188910	Euryarchaeota	Halobacteria	3.59148	66.6	-	ATXS01	96	3532	3260	7/9/13	3/29/17	Contig	DOE Joint Genome Institute	SAMN02441569	GCA_000421805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/805/GCA_000421805.1_ASM42180v1	-	DSM 17463
Desulfovibrio aminophilus DSM 12254	1121440	PRJNA188880	188880	Proteobacteria	delta/epsilon subdivisions	3.41906	66.2	-	AUMA01	25	3283	3178	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440804	GCA_000422565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/565/GCA_000422565.1_ASM42256v1	-	DSM 12254
Desulfovibrio zosterae DSM 11974	1121467	PRJNA188882	188882	Proteobacteria	delta/epsilon subdivisions	4.09265	41.8	-	AUDC01	15	3666	3563	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441537	GCA_000425265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/265/GCA_000425265.1_ASM42526v1	-	DSM 11974
Pseudomonas caeni DSM 24390	521719	PRJNA188884	188884	Proteobacteria	Gammaproteobacteria	3.02232	48.3	-	ATXQ01	24	2848	2746	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440589	GCA_000421765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/765/GCA_000421765.1_ASM42176v1	-	DSM 24390
Psychromonas arctica DSM 14288	1123036	PRJNA188885	188885	Proteobacteria	Gammaproteobacteria	4.7459	37.8	-	AXWP01	81	4107	3867	10/25/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440766	GCA_000482725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/725/GCA_000482725.1_ASM48272v1	-	DSM 14288
Psychroserpens burtonensis DSM 12212	1123037	PRJNA188886	188886	FCB group	Bacteroidetes/Chlorobi group	3.97645	33.4	-	AUDE01	68	3539	3381	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440859	GCA_000425305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/305/GCA_000425305.1_ASM42530v1	-	DSM 12212
Pseudomonas protegens	380021	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	7.07553	63.3	chromosome:NZ_CP022097.1/CP022097.1	-	1	6417	6088	6/27/17	6/29/17	Complete Genome	US Food and Drug Administration 	SAMN06173320	GCA_002208745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/745/GCA_002208745.1_ASM220874v1	-	FDAARGOS_307
Rheinheimera baltica DSM 14885	1123053	PRJNA188888	188888	Proteobacteria	Gammaproteobacteria	4.35177	46.2	-	AUDG01	134	4110	3828	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441194	GCA_000425345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/345/GCA_000425345.1_ASM42534v1	-	DSM 14885
Rubritepida flocculans DSM 14296	1123072	PRJNA188889	188889	Proteobacteria	Alphaproteobacteria	3.83412	73.4	-	AUDH01	74	3791	3639	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440628	GCA_000425365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/365/GCA_000425365.1_ASM42536v1	-	DSM 14296
Pseudoduganella violaceinigra DSM 15887	1121480	PRJNA188890	188890	Proteobacteria	Betaproteobacteria	6.11035	63	-	AUDI01	41	5752	5550	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440629	GCA_000425385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/385/GCA_000425385.1_ASM42538v1	-	DSM 15887
Ferrimonas kyonanensis DSM 18153	1121879	PRJNA188891	188891	Proteobacteria	Gammaproteobacteria	4.93096	56.9	-	AUDJ01	40	4493	4377	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441539	GCA_000425405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/405/GCA_000425405.1_ASM42540v1	-	DSM 18153
Flavobacterium daejeonense DSM 17708	1121887	PRJNA188892	188892	FCB group	Bacteroidetes/Chlorobi group	4.24414	34.7	-	AUDK01	49	3624	3483	7/10/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440860	GCA_000425425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/425/GCA_000425425.1_ASM42542v1	-	DSM 17708
Humibacter albus DSM 18994	1121952	PRJNA188916	188916	Terrabacteria group	Actinobacteria	3.69307	68	-	ATXT01	20	3305	3177	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440591	GCA_000421825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/825/GCA_000421825.1_ASM42182v1	-	DSM 18994
Jeotgalicoccus marinus DSM 19772	1122128	PRJNA188917	188917	Terrabacteria group	Firmicutes	2.10982	36.8	-	AUEE01	26	2224	2104	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441531	GCA_000425825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/825/GCA_000425825.1_ASM42582v1	-	DSM 19772
Lacticigenium naphtae DSM 19658	1122143	PRJNA188919	188919	Terrabacteria group	Firmicutes	2.13451	37.7	-	AUEG01	32	1996	1927	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440849	GCA_000425865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/865/GCA_000425865.1_ASM42586v1	-	DSM 19658
Lactobacillus harbinensis DSM 16991	1122147	PRJNA188920	188920	Terrabacteria group	Firmicutes	3.13483	53.1	-	AUEH01	101	3154	2934	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440850	GCA_000425885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/885/GCA_000425885.1_ASM42588v1	-	DSM 16991
Leucobacter chironomi DSM 19883	1122175	PRJNA188922	188922	Terrabacteria group	Actinobacteria	2.96471	69.9	-	ATXU01	27	2719	2598	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441232	GCA_000421845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/845/GCA_000421845.1_ASM42184v1	26203333	DSM 19883
Bradyrhizobium japonicum	375	PRJNA347501	347501	Proteobacteria	Alphaproteobacteria	10.1387	63.3	chromosome:NZ_CP017637.1/CP017637.1	-	1	9620	9198	11/30/16	4/6/17	Complete Genome	Tohoku University	SAMN05890661	GCA_001887695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/695/GCA_001887695.1_ASM188769v1	-	J5
Lactobacillus psittaci DSM 15354	1122152	PRJNA188921	188921	Terrabacteria group	Firmicutes	1.54285	35.7	-	AUEI01	23	1405	1306	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440851	GCA_000425905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/905/GCA_000425905.1_ASM42590v1	-	DSM 15354
Pseudomonas azotifigens DSM 17556	1292027	PRJNA188903	188903	Proteobacteria	Gammaproteobacteria	5.01742	66.9	-	AUDU01	59	4575	4406	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441543	GCA_000425625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/625/GCA_000425625.1_ASM42562v1	24179119	DSM 17556
Pseudomonas taiwanensis DSM 21245	1292030	PRJNA188913	188913	Proteobacteria	Gammaproteobacteria	5.41513	61.9	-	AUEC01	67	5056	4887	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440864	GCA_000425785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/785/GCA_000425785.1_ASM42578v1	-	DSM 21245
Pseudomonas vranovensis DSM 16006	1292031	PRJNA188914	188914	Proteobacteria	Gammaproteobacteria	5.69781	61.5	-	AUED01	36	5289	5133	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441181	GCA_000425805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/805/GCA_000425805.1_ASM42580v1	-	DSM 16006
Amycolatopsis vancoresmycina DSM 44592	1292037	PRJNA188706	188706	Terrabacteria group	Actinobacteria	9.0365	71.8	-	AOUO01	784	8691	7653	5/3/13	4/8/17	Contig	"Institute of Microbial Technology (IMTECH), Chandigarh, India 160036"	SAMN02469982	GCA_000388135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/135/GCA_000388135.1_Whole_genome_assembly	-	DSM 44592
Dietzia sp. UCD-THP	1292020	PRJNA188721	188721	Terrabacteria group	Actinobacteria	3.92773	69.4	-	AOSR01	138	3684	3502	3/28/13	4/8/17	Scaffold	UC Davis	SAMN02471298	GCA_000349585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/585/GCA_000349585.1_Dietzia_sp._UCD-THP	23661480	UCD-THP
Kocuria sp. UCD-OTCP	1292021	PRJNA188732	188732	Terrabacteria group	Actinobacteria	3.79149	72.7	-	AOSQ01	68	3463	3296	3/28/13	4/8/17	Scaffold	UC Davis	SAMN02471294	GCA_000349605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/605/GCA_000349605.1_Kocuria_sp._UCD-OTCP	23661474	UCD-OTCP
Desulfobulbus sp. Tol-SR	1536652	PRJNA258302	258302	Proteobacteria	delta/epsilon subdivisions	4.21178	59.3	-	JROS01	203	3852	3201	10/28/14	1/28/15	Contig	University of Alberta	SAMN02991556	GCA_000769715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/715/GCA_000769715.1_ASM76971v1	25593261	-
Kiritimatiella glycovorans	1307763	PRJNA274602	274602	PVC group	Kiritimatiellaeota	2.94972	63.3	chromosome:NZ_CP010904.1/CP010904.1	-	1	2460	2378	6/2/15	9/21/17	Complete Genome	Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures	SAMN03329217	GCA_001017655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/655/GCA_001017655.1_ASM101765v1	27300277	L21-Fru-AB
Pseudomonas denitrificans (nomen rejiciendum)	43306	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.39406	66.4	-	JUOT01	187	6138	5877	7/10/15	5/24/17	Scaffold	University of Washington	SAMN03198107	GCA_001067815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/815/GCA_001067815.1_ASM106781v1	26230489	90_PDEN
Limnohabitans planktonicus II-D5	1293045	PRJNA189227	189227	Proteobacteria	Betaproteobacteria	4.74225	59.3	-	LFYT01	7	4037	3872	8/18/15	4/16/17	Scaffold	"Biology Centre of ASCR, Institute of Hydrobiology"	SAMN03801504	GCA_001270065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/065/GCA_001270065.1_ASM127006v1	-	II-D5
candidate division SR1 bacterium MGEHA	1293577	PRJNA189303	189303	unclassified Bacteria	Bacteria candidate phyla	1.10971	35.7	-	AOTF01	62	-	-	4/2/13	7/29/15	Contig	Oak Ridge National Laboratory	SAMN02470745	GCA_000350285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/285/GCA_000350285.1_OR1	23509275	-
Clostridium intestinale URNW	1294142	PRJNA189428	189428	Terrabacteria group	Firmicutes	4.67767	30.2	-	APJA01	3	4668	4364	9/18/13	4/17/17	Scaffold	University of Manitoba	SAMN02471872	GCA_000469625.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/625/GCA_000469625.2_ASM46962v2	24136853	URNW
Pseudomonas sp. St29	1500687	PRJDB2876	279058	Proteobacteria	Gammaproteobacteria	6.83312	63.3	chromosome Unknown:NZ_AP014628.1/AP014628.1	-	1	6239	6061	3/19/15	4/11/17	Complete Genome	National Institute of Agrobiological Sciences	SAMD00018366	GCA_001547915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/915/GCA_001547915.1_ASM154791v1	25496595	St29
Bifidobacterium pseudolongum PV8-2	1447715	PRJNA234364	234364	Terrabacteria group	Actinobacteria	2.0327	63.3	chromosome:NZ_CP007457.1/CP007457.1	-	1	1723	1608	12/9/14	4/5/17	Complete Genome	ETH Zurich	SAMN03253091	GCA_000800475.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/475/GCA_000800475.2_ASM80047v2	25614573	PV8-2
Nocardiopsis baichengensis YIM 90130	1236902	PRJNA176245	176245	Terrabacteria group	Actinobacteria	6.40411	73.6	-	ANAS01	71	5570	5391	2/19/13	5/19/17	Contig	"Yunnan Institute of Microbiology, Yunnan University"	SAMN02472159	GCA_000341205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/205/GCA_000341205.1_v1.06	23626695	YIM 90130
Pseudomonas protegens Cab57	1420599	PRJDB1527	244139	Proteobacteria	Gammaproteobacteria	6.82789	63.3	chromosome:NZ_AP014522.1/AP014522.1	-	1	6248	6101	4/9/14	4/3/17	Complete Genome	National Institute of Agrobiological Sciences	SAMD00061024	GCA_000828695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/695/GCA_000828695.1_ASM82869v1	24695768	-
Nocardiopsis chromatogenes YIM 90109	1246475	PRJNA178056	178056	Terrabacteria group	Actinobacteria	6.90875	73.8	-	ANBH01	415	6129	5570	2/19/13	5/19/17	Contig	"Yunnan Institute of Microbiology, Yunnan University"	SAMN02472161	GCA_000341185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/185/GCA_000341185.1_SOAPdenovo_v1.06	23626695	YIM 90109
Pseudodesulfovibrio piezophilus C1TLV30	1322246	PRJEB26	189945	Proteobacteria	delta/epsilon subdivisions	3.6461	50	chromosome:NC_020409.1/FO203427.1	-	1	3376	3275	2/19/13	4/17/17	Chromosome	Genoscope CEA	SAMEA2272703	GCA_000341895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/895/GCA_000341895.1_ASM34189v1	23383081	type strain: C1TLV30
Nocardiopsis halophila DSM 44494	1245472	PRJNA177989	177989	Terrabacteria group	Actinobacteria	6.32007	73.6	-	ANAD01	300	5627	5156	2/19/13	5/19/17	Contig	"Yunnan Institute of Microbiology, Yunnan University"	SAMN02472157	GCA_000341245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/245/GCA_000341245.1_SOAPdenovo_v1.06	23626695	DSM 44494
Nocardiopsis prasina DSM 43845	1245475	PRJNA178003	178003	Terrabacteria group	Actinobacteria	5.9988	70.8	-	ANAE01	240	5322	4960	2/19/13	5/19/17	Contig	"Yunnan Institute of Microbiology, Yunnan University"	SAMN02472147	GCA_000341265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/265/GCA_000341265.1_SOAPdenovo_1.06	23626695	DSM 43845
Nocardiopsis synnemataformans DSM 44143	1245476	PRJNA178005	178005	Terrabacteria group	Actinobacteria	7.35969	72.3	-	ANAW01	328	6543	6019	2/19/13	5/19/17	Contig	"Yunnan Institute of Microbiology, Yunnan University"	SAMN02472153	GCA_000340945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/945/GCA_000340945.1_SOAPdenovo1.06	23626695	DSM 44143
Nocardiopsis halotolerans DSM 44410	1246444	PRJNA178032	178032	Terrabacteria group	Actinobacteria	6.26393	71.4	-	ANAX01	424	5581	4913	2/19/13	5/19/17	Contig	"Yunnan Institute of Microbiology, Yunnan University"	SAMN02472154	GCA_000341065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/065/GCA_000341065.1_SOAPdenovo_v1.06	23626695	DSM 44410
Nocardiopsis kunsanensis DSM 44524	1246445	PRJNA178034	178034	Terrabacteria group	Actinobacteria	5.31209	69.6	-	ANAY01	97	4624	4385	2/19/13	5/19/17	Contig	"Yunnan Institute of Microbiology, Yunnan University"	SAMN02472160	GCA_000340965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/965/GCA_000340965.1_SOAPdenovo_v1.06	23626695	DSM 44524
Nocardiopsis valliformis DSM 45023	1246448	PRJNA178035	178035	Terrabacteria group	Actinobacteria	7.14534	69.6	-	ANAZ01	88	6198	5944	2/19/13	5/19/17	Contig	"Yunnan Institute of Microbiology, Yunnan University"	SAMN02472148	GCA_000340985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/985/GCA_000340985.1_genetic_mechanisms_of_environmental_adaptability	23626695	DSM 45023
Nocardiopsis ganjiahuensis DSM 45031	1237500	PRJNA178038	178038	Terrabacteria group	Actinobacteria	7.35229	71	-	ANBA01	54	6422	6205	2/19/13	5/19/17	Contig	"Yunnan Institute of Microbiology, Yunnan University"	SAMN02472158	GCA_000341085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/085/GCA_000341085.1_SOAPdenovo_v1.06	23626695	DSM 45031
Nocardiopsis potens DSM 45234	570268	PRJNA178039	178039	Terrabacteria group	Actinobacteria	6.90997	74.8	-	ANBB01	133	5929	5697	2/19/13	5/19/17	Contig	"Yunnan Institute of Microbiology, Yunnan University"	SAMN02472155	GCA_000341105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/105/GCA_000341105.1_SOAPdenovo_v1.06	23626695	DSM 45234
Nocardiopsis lucentensis DSM 44048	1246460	PRJNA178051	178051	Terrabacteria group	Actinobacteria	6.32527	71.2	-	ANBC01	968	5978	5058	2/19/13	5/19/17	Contig	"Yunnan Institute of Microbiology, Yunnan University"	SAMN02472149	GCA_000341125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/125/GCA_000341125.1_SOAPdenovo_v1.06	23626695	DSM 44048
Nocardiopsis alkaliphila YIM 80379	1246461	PRJNA178052	178052	Terrabacteria group	Actinobacteria	5.20955	67.5	-	ANBD01	213	4689	4365	2/19/13	5/19/17	Contig	"Yunnan Institute of Microbiology, Yunnan University"	SAMN02472156	GCA_000341005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/005/GCA_000341005.1_SOAPdenovo_v1.06	23626695	YIM 80379
Nocardiopsis xinjiangensis YIM 90004	1246474	PRJNA178053	178053	Terrabacteria group	Actinobacteria	5.33043	69.7	-	ANBE01	90	4649	4383	2/19/13	6/20/17	Contig	"Yunnan Institute of Microbiology, Yunnan University"	SAMN02472150	GCA_000341145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/145/GCA_000341145.1_SOAPdenovo_v1.06	23626695	YIM 90004
Nocardiopsis salina YIM 90010	1246485	PRJNA178054	178054	Terrabacteria group	Actinobacteria	5.8083	70.4	-	ANBF01	272	5225	4658	2/19/13	5/19/17	Contig	"Yunnan Institute of Microbiology, Yunnan University"	SAMN02472151	GCA_000341025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/025/GCA_000341025.1_SOAPdenovo_v1.06	23626695	YIM 90010
Nocardiopsis gilva YIM 90087	1235441	PRJNA178055	178055	Terrabacteria group	Actinobacteria	6.04174	69.7	-	ANBG01	481	5501	4914	2/19/13	5/19/17	Contig	"Yunnan Institute of Microbiology, Yunnan University"	SAMN02472152	GCA_000341165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/165/GCA_000341165.1_SOAPdenovo_v1.06	23626695	YIM 90087
Caldicellulosiruptor sp. F32	1214564	PRJNA190822	190822	Terrabacteria group	Firmicutes	2.37864	35.2	-	APGP01	127	2361	2134	5/31/13	4/17/17	Contig	"Institute of Bioenergy and Bioprocess Technology, CAS"	SAMN02469949	GCA_000404025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/025/GCA_000404025.1_f32_1	25576604	F32
Gluconobacter thailandicus NBRC 3255	1291534	PRJDB753	190625	Proteobacteria	Alphaproteobacteria	3.30523	56.3	-	BAON01	109	3111	2951	2/23/13	4/8/17	Contig	Yamaguchi University	SAMD00020941	GCA_000344115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/115/GCA_000344115.1_ASM34411v1	23580707	NBRC 3255
Solirubrobacter sp. URHD0082	1298857	PRJNA190813	190813	Terrabacteria group	Actinobacteria	6.64009	72.3	-	AUEK01	28	6400	6197	7/10/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440852	GCA_000425945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/945/GCA_000425945.1_ASM42594v1	-	URHD0082
Marmoricola sp. URHB0036	1298863	PRJNA190836	190836	Terrabacteria group	Actinobacteria	4.82955	69.8	-	AUEP01	22	4647	4522	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440636	GCA_000426045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/045/GCA_000426045.1_ASM42604v1	-	URHB0036
Croceitalea dokdonensis DOKDO 023	1300341	PRJNA191948	191948	FCB group	Bacteroidetes/Chlorobi group	3.8838	41.9	-	LDJX01	16	3433	3346	10/5/15	4/16/17	Contig	Yonsei University	SAMN03702328	GCA_001306415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/415/GCA_001306415.1_ASM130641v1	-	DOKDO 023
Sulfuritalea hydrogenivorans sk43H	1223802	PRJDB482	233666	Proteobacteria	Betaproteobacteria	3.80265	63.3	chromosome:NZ_AP012547.1/AP012547.1	-	1	3636	3537	1/8/14	4/17/17	Complete Genome	"Institute of Low Temperature Science, Hokkaido University "	SAMD00061036	GCA_000828635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/635/GCA_000828635.1_ASM82863v1	25017294	DSM 22779
Pseudomonas sp. FGI182	1259844	PRJNA173784	173784	Proteobacteria	Gammaproteobacteria	5.89131	63.3	chromosome:NZ_CP007012.1/CP007012.1	-	1	5343	5157	12/20/13	4/9/17	Complete Genome	DOE Joint Genome Institute	SAMN00261344	GCA_000511325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/325/GCA_000511325.1_ASM51132v1	-	FGI182
Lysobacter dokdonensis DS-58	1300345	PRJNA260566	260566	Proteobacteria	Gammaproteobacteria	3.27441	67.2	-	JRKJ01	25	3175	3073	11/4/14	4/17/17	Contig	Yonsei University	SAMN03024168	GCA_000770795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/795/GCA_000770795.1_ASM77079v1	26664701	DS-58
Maribacter dokdonensis DSW-8	1300346	PRJNA191955	191955	FCB group	Bacteroidetes/Chlorobi group	4.43454	36	-	LDPE01	16	3805	3701	11/25/15	4/11/17	Contig	Yonsei University	SAMN03744428	GCA_001447995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/447/995/GCA_001447995.1_DSW8_denovo_v1	-	DSW-8
Magnetospirillum gryphiswaldense MSR-1 v2	1430440	PRJEB4690	227086	Proteobacteria	Alphaproteobacteria	4.3658	63.3	chromosome I:NC_023065.1/HG794546.1	-	1	4181	3950	12/16/13	4/17/17	Complete Genome	CHINA-AGRICULTURAL-UNIVERSITY	SAMEA3138838	GCA_000513295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/295/GCA_000513295.1_MGMSRv2	24625872	MSR-1
Pseudomonas protegens Pf-5	220664	PRJNA327	327	Proteobacteria	Gammaproteobacteria	7.07489	63.3	chromosome:NC_004129.6/CP000076.1	-	1	6415	6250	8/21/02	5/19/17	Complete Genome	TIGR	SAMN02604012	GCA_000012265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/265/GCA_000012265.1_ASM1226v1	15980861	Pf-5
Polaribacter dokdonensis DSW-5	1300348	PRJNA191957	191957	FCB group	Bacteroidetes/Chlorobi group	3.08708	30.1	-	LGBR01	2	2798	2725	9/10/15	4/11/17	Contig	Yonsei University	SAMN03846818	GCA_001280865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/865/GCA_001280865.1_DSW5v1	-	DSW-5
Paraburkholderia sp. SOS3	1926494	PRJNA357122	357122	Proteobacteria	Betaproteobacteria	7.50291	63.2962	chromosome 1:NZ_CP018811.1/CP018811.1; chromosome 2:NZ_CP018812.1/CP018812.1; plasmid unnamed1:NZ_CP018813.1/CP018813.1	-	3	6732	6515	12/27/16	4/16/17	Complete Genome	Sustainable Organic Solutions Pty Ltd	SAMN06114787	GCA_001922345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/345/GCA_001922345.1_ASM192234v1	-	SOS3
Porphyrobacter dokdonensis DSW-74	1300349	PRJNA191958	191958	Proteobacteria	Alphaproteobacteria	2.99515	64.8	-	LZYB01	11	2848	2760	6/28/16	4/17/17	Contig	Yonsei University	SAMN03266125	GCA_001677335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/335/GCA_001677335.1_ASM167733v1	-	DSW-74
Sulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565	1300350	PRJNA233443	233443	Proteobacteria	Alphaproteobacteria	3.54016	55.2	-	JASF01	9	3437	3348	4/8/14	4/9/17	Contig	Yonsei University	SAMN02721581	GCA_000622405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/405/GCA_000622405.1_12864_draft	-	KCTC 12864
Comamonas sp. B-9	1055192	PRJNA190780	190780	Proteobacteria	Betaproteobacteria	5.24376	63.5	-	APCR01	312	4931	4367	6/6/13	4/17/17	Scaffold	"Environmental engineering institut, Central south university, Hunan Province, China"	SAMN02469432	GCA_000410635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/635/GCA_000410635.1_ASM41063v1	22380656	B-9
Chryseobacterium koreense CCUG 49689	1304281	PRJNA287693	287693	FCB group	Bacteroidetes/Chlorobi group	3.1542	40.1	-	LFNG01	64	2979	2868	7/2/15	4/17/17	Contig	GCAT-SEEK	SAMN03787380	GCA_001045435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/435/GCA_001045435.1_ASM104543v1	15545478	CCUG 49689
Mycobacterium orygis 112400015	1305739	PRJNA193095	193095	Terrabacteria group	Actinobacteria	4.28266	65.6	-	APKD01	108	4181	3925	4/4/13	5/19/17	Contig	"Queen Mary, University of London"	SAMN02470820	GCA_000353205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/205/GCA_000353205.1_Morygis1.0	-	112400015
Marinobacter nanhaiticus D15-8W	626887	PRJNA193181	193181	Proteobacteria	Gammaproteobacteria	5.35891	58.5	-	APLQ01	8	4835	4728	4/15/13	5/19/17	Scaffold	"First Institute of Oceanography, State Oceanic Administration of China"	SAMN02469788	GCA_000364845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/845/GCA_000364845.1_D15-8W.seq.sqn_for_a_Marinobacter_nanhaiticus_assembly_version_1.0	23723401	D15-8W
Grimontia indica	1056512	PRJNA178257	178257	Proteobacteria	Gammaproteobacteria	5.55559	48.7	-	ANFM02	109	5030	4851	1/25/13	4/17/17	Contig	Institute of Microbial Technology	SAMN01940370	GCA_000333895.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/895/GCA_000333895.2_ASM33389v2	24465608	AK16
Marinobacter santoriniensis NKSG1	1288826	PRJNA188242	188242	Proteobacteria	Gammaproteobacteria	4.03347	58.3	-	APAT01	41	3732	3638	3/21/13	4/17/17	Contig	University of Manchester	SAMN02471869	GCA_000347775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/775/GCA_000347775.1_ASM34777v1	23661489	NKSG1
Petrotoga sp. UBA3917	1947071	PRJNA348753	348753	Thermotogae	Thermotogae	1.54951	29.2	-	DGEV01	146	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455015	GCA_002386145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/145/GCA_002386145.1_ASM238614v1	28894102	-
Xanthomonas gardneri	90270	PRJNA344031	344031	Proteobacteria	Gammaproteobacteria	5.62545	63.2927	chromosome:NZ_CP018731.1/CP018731.1; plasmid pICMP7383.1:NZ_CP018732.1/CP018732.1; plasmid pICMP7383.2:NZ_CP018733.1/CP018733.1; plasmid pICMP7383.3:NZ_CP018734.1/CP018734.1	-	4	5149	4623	12/19/16	4/6/17	Complete Genome	cirad	SAMN05823150	GCA_001908775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/775/GCA_001908775.1_ASM190877v1	-	ICMP7383
Staphylococcus fleurettii	150056	PRJNA376654	376654	Terrabacteria group	Firmicutes	2.58213	31.7	-	MWJM01	48	2603	2494	3/3/17	6/23/17	Scaffold	Max Rubner-Institut	SAMN06445341	GCA_002018435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/435/GCA_002018435.1_ASM201843v1	28495782	MBTS-1
Salinisphaera hydrothermalis C41B8	1304275	PRJNA193111	193111	Proteobacteria	Gammaproteobacteria	4.28231	63.6	-	APNK01	92	3851	3754	7/22/14	4/17/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02929445	GCA_000732535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/535/GCA_000732535.1_ASM73253v1	-	C41B8
Salinisphaera sp. UBA1016	1947453	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.74115	63.4	-	DBAG01	269	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450473	GCA_002291565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/565/GCA_002291565.1_ASM229156v1	28894102	-
Bifidobacterium thermophilum	33905	PRJNA239954	239954	Terrabacteria group	Actinobacteria	2.0995	59.9	-	JGZV01	12	1653	1516	8/18/14	4/9/17	Contig	University of Parma	SAMN02673459	GCA_000741495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/495/GCA_000741495.1_Bifthelum	"2,508,549,325,107,960"	JCM 1207
Erythrobacter citreus LAMA 915	1306953	PRJNA193448	193448	Proteobacteria	Alphaproteobacteria	3.09474	64.3	-	JYNE01	28	3024	2913	8/5/15	4/16/17	Contig	Universidade do Vale do Itajai (UNIVALI)	SAMN03344099	GCA_001235865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/865/GCA_001235865.1_Erythrobacter_citreus_LAMA_915_v1	-	LAMA 915
Marinobacter excellens HL-55	1305731	PRJNA195885	195885	Proteobacteria	Gammaproteobacteria	3.99898	56.3	-	JYNR01	1	3672	3530	2/26/15	4/10/17	Contig	DOE Joint Genome Institute	SAMN03351827	GCA_000934705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/705/GCA_000934705.1_ASM93470v1	-	HL-55
Methylophaga lonarensis MPL	1286106	PRJNA186923	186923	Proteobacteria	Gammaproteobacteria	2.63762	49.7	-	APHR01	116	2627	2423	3/26/13	4/17/17	Contig	National Centre for Cell Science	SAMN02470674	GCA_000349205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/205/GCA_000349205.1_MPLversion1	23661481	MPL
Gracilibacillus halophilus YIM-C55.5	1308866	PRJNA194065	194065	Terrabacteria group	Firmicutes	3.03443	37.9	-	APML01	104	3035	2807	4/9/13	4/17/17	Contig	King Abdullah University fo Science and Technology	SAMN02470131	GCA_000359605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/605/GCA_000359605.1_ASM35960v1	-	YIM-C55.5
Lactobacillus pobuzihii E100301 = KCTC 13174	1242253	PRJNA177370	177370	Terrabacteria group	Firmicutes	2.35166	37.7	-	APCP01	54	2205	2050	3/28/13	4/8/17	Scaffold	Ming Chuan University	SAMN02470552	GCA_000349725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/725/GCA_000349725.1_ASM34972v1	23661478	E100301
Burkholderia sp. CCGE1002	640511	PRJNA37719	37719	Proteobacteria	Betaproteobacteria	7.88486	63.2559	chromosome 1:NC_014117.1/CP002013.1; chromosome 2:NC_014118.1/CP002014.1; chromosome 3:NC_014119.1/CP002015.1; plasmid pBC201:NC_014120.1/CP002016.1	-	4	7273	6845	4/30/10	5/18/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598517	GCA_000092885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/885/GCA_000092885.1_ASM9288v1	23209196	CCGE1002
Ilumatobacter nonamiensis YM16-303	1313171	PRJDB737	187050	Terrabacteria group	Actinobacteria	4.28223	67	-	BAOL01	399	4069	3862	3/16/13	5/18/17	Contig	Kitasato University	SAMD00036665	GCA_000350145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/145/GCA_000350145.1_ASM35014v1	23524358	YM16-303
Burkholderia sp. YI23	1097668	PRJNA74517	74517	Proteobacteria	Betaproteobacteria	8.89641	63.2554	chromosome 1:NC_016589.1/CP003087.1; chromosome 2:NC_016625.1/CP003088.1; chromosome 3:NC_016590.1/CP003089.1; plasmid byi_1p:NC_016626.1/CP003090.1; plasmid byi_2p:NC_016591.1/CP003091.1; plasmid byi_3p:NC_016592.1/CP003092.1	-	6	8362	8112	11/22/11	5/18/17	Complete Genome	NICEM at Seoul National University	SAMN02603681	GCA_000236065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/065/GCA_000236065.1_ASM23606v1	22275096	YI23
Nitrosospira sp. NpAV	58133	PRJNA272527	272527	Proteobacteria	Betaproteobacteria	3.45	53.1	-	JXQM01	317	3096	2967	2/3/15	4/17/17	Contig	"University of North Carolina, Charlotte"	SAMN03283207	GCA_000832065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/065/GCA_000832065.1_ASM83206v1	-	NpAV
Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643	1293054	PRJEB1427	194508	Terrabacteria group	Firmicutes	2.87386	32.3	-	CAUI01	24	2691	2588	3/11/13	4/17/17	Contig	TUT	SAMEA2272400	GCA_000350165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/165/GCA_000350165.1_ASM35016v1	23640197	type strain:DSM 6643
Mesorhizobium metallidurans STM 2683	1297569	PRJEB1501	194514	Proteobacteria	Alphaproteobacteria	6.23253	62.5	-	CAUM01	191	6216	5734	3/21/13	5/19/17	Contig	Genoscope CEA	SAMEA2272539	GCA_000350085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/085/GCA_000350085.1_ASM35008v1	-	STM 2683
Corynebacterium crenatum MT	1310164	PRJNA194384	194384	Terrabacteria group	Actinobacteria	3.3467	53.9	-	AQPS01	48	3145	2993	4/23/13	4/8/17	Contig	Jiangxi Normal University	SAMN02470113	GCA_000380545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/545/GCA_000380545.1_contig	-	MT
Streptomyces mirabilis	68239	PRJNA247519	247519	Terrabacteria group	Actinobacteria	10.0426	70.8	-	JQJV01	81	9102	8527	8/28/14	3/11/17	Scaffold	DOE Joint Genome Institute	SAMN02787133	GCA_000745715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/715/GCA_000745715.1_ASM74571v1	-	OV308
Desulforegula conservatrix Mb1Pa	1304885	PRJNA195702	195702	Proteobacteria	delta/epsilon subdivisions	4.46904	42.4	-	AUEY01	178	4045	3803	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440640	GCA_000426225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/225/GCA_000426225.1_ASM42622v1	-	Mb1Pa
Salipiger mucosus DSM 16094	1123237	PRJNA188761	188761	Proteobacteria	Alphaproteobacteria	5.68939	67.2	-	APVH01	30	5643	5245	7/31/13	4/17/17	Scaffold	Leibniz Institute DSMZ Braunschweig	SAMN02469746	GCA_000442255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/255/GCA_000442255.1_Salmuc	-	DSM 16094
Butyricimonas virosa DSM 23226	1121130	PRJNA195711	195711	FCB group	Bacteroidetes/Chlorobi group	4.71786	42.3	-	JAEW01	68	3921	3753	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02584930	GCA_000519105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/105/GCA_000519105.1_ASM51910v1	-	DSM 23226
Mogibacterium timidum ATCC 33093	1401079	PRJNA219678	219678	Terrabacteria group	Firmicutes	1.80621	44.3	-	JALU01	30	1646	1558	1/30/14	4/17/17	Contig	J. Craig Venter Institute	SAMN02641586	GCA_000525775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/775/GCA_000525775.1_MtimATCC33093v1.0	-	ATCC 33093
Novosphingobium sp. PP1Y	702113	PRJEA66901	66901	Proteobacteria	Alphaproteobacteria	5.31391	63.2525	chromosome:NC_015580.1/FR856862.1; plasmid Lpl:NC_015579.1/FR856860.1; plasmid Mpl:NC_015583.1/FR856861.1; plasmid Spl:NC_015582.1/FR856859.1	-	4	4963	4801	5/24/11	5/19/17	Complete Genome	Ceinge Biotecnologie Avanzate	SAMEA2272572	GCA_000253255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/255/GCA_000253255.1_ASM25325v1	21685292	PP1Y
Rhizobium leucaenae USDA 9039	1041147	PRJNA195751	195751	Proteobacteria	Alphaproteobacteria	6.67973	59.4	-	AUFB01	98	6502	6110	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441532	GCA_000426285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/285/GCA_000426285.1_ASM42628v1	-	USDA 9039
Anaerovorax odorimutans DSM 5092	1120998	PRJNA195753	195753	Terrabacteria group	Firmicutes	3.26352	31.5	-	AUFC01	54	2958	2825	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441533	GCA_000426305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/305/GCA_000426305.1_ASM42630v1	-	DSM 5092
Arenimonas composti TR7-09 = DSM 18010	1121013	PRJNA195778	195778	Proteobacteria	Gammaproteobacteria	3.15934	70.8	-	AUFF01	29	2878	2795	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441520	GCA_000426365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/365/GCA_000426365.1_ASM42636v1	-	DSM 18010
Arsenicicoccus bolidensis DSM 15745	1121017	PRJNA195780	195780	Terrabacteria group	Actinobacteria	3.99532	71.8	-	AUFG01	86	3774	3553	7/10/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441521	GCA_000426385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/385/GCA_000426385.1_ASM42638v1	-	DSM 15745
Bifidobacterium subtile	77635	PRJNA239867	239867	Terrabacteria group	Actinobacteria	2.79009	60.9	-	JGZR01	27	2315	2163	8/18/14	4/9/17	Contig	University of Parma	SAMN02673455	GCA_000741775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/775/GCA_000741775.1_Bifsub	"2,508,549,325,107,960"	LMG 11597
Brachymonas denitrificans DSM 15123	1121117	PRJEB16920	351037	Proteobacteria	Betaproteobacteria	2.71287	64.2	-	FOCW01	21	2534	2427	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745977	GCA_900110225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/225/GCA_900110225.1_IMG-taxon_2599185145_annotated_assembly	-	DSM 15123
Brevibacterium album DSM 18261	1121122	PRJNA195785	195785	Terrabacteria group	Actinobacteria	4.09497	70.9	-	AUFJ01	15	3600	3458	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440844	GCA_000426445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/445/GCA_000426445.1_ASM42644v1	-	DSM 18261
Chryseobacterium caeni DSM 17710	1121285	PRJNA195786	195786	FCB group	Bacteroidetes/Chlorobi group	4.11841	36.6	-	AUFK01	17	3735	3647	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441523	GCA_000426465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/465/GCA_000426465.1_ASM42646v1	-	DSM 17710
Comamonas badia DSM 17552	1121348	PRJNA195787	195787	Proteobacteria	Betaproteobacteria	3.68102	66	-	AXVM01	24	3536	3415	10/25/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441113	GCA_000484635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/635/GCA_000484635.1_ASM48463v1	-	DSM 17552
Dysgonomonas capnocytophagoides DSM 22835	1121485	PRJNA195789	195789	FCB group	Bacteroidetes/Chlorobi group	4.37799	37.7	-	AUFL01	38	3560	3439	7/10/13	6/12/17	Scaffold	DOE Joint Genome Institute	SAMN02441172	GCA_000426485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/485/GCA_000426485.1_ASM42648v1	-	DSM 22835
Glaciibacter superstes DSM 21135	1121924	PRJNA195790	195790	Terrabacteria group	Actinobacteria	4.80253	64.4	-	ATWH01	38	4585	4414	7/9/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440580	GCA_000421145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/145/GCA_000421145.1_ASM42114v1	-	DSM 21135
Leptotrichia trevisanii DSM 22070	1122173	PRJNA195791	195791	Fusobacteria	Fusobacteriia	2.85336	30.4	-	AXVL01	78	2671	2495	10/25/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441112	GCA_000482505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/505/GCA_000482505.1_ASM48250v1	-	DSM 22070
Marinobacter daepoensis DSM 16072	1122197	PRJNA195792	195792	Proteobacteria	Gammaproteobacteria	3.83006	56.8	-	ATWI01	16	3541	3446	7/9/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440900	GCA_000421165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/165/GCA_000421165.1_ASM42116v1	-	DSM 16072
Marinobacterium georgiense DSM 11526	1122198	PRJEB16649	349933	Proteobacteria	Gammaproteobacteria	3.92526	54.9	-	FNRJ01	51	3733	3573	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745729	GCA_900107855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/855/GCA_900107855.1_IMG-taxon_2634166328_annotated_assembly	-	DSM 11526
Nisaea denitrificans DSM 18348	1122607	PRJNA195795	195795	Proteobacteria	Alphaproteobacteria	4.62672	60.5	-	AUFM01	20	4306	4219	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441524	GCA_000426505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/505/GCA_000426505.1_ASM42650v1	-	DSM 18348
Nocardioides alkalitolerans DSM 16699	1122608	PRJNA195796	195796	Terrabacteria group	Actinobacteria	4.85448	73.1	-	AUFN01	16	4592	4475	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441173	GCA_000426525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/525/GCA_000426525.1_ASM42652v1	-	DSM 16699
Ornithinimicrobium pekingense DSM 21552	1122622	PRJNA195797	195797	Terrabacteria group	Actinobacteria	3.85264	72.9	-	ATWJ01	15	3569	3449	7/9/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441240	GCA_000421185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/185/GCA_000421185.1_ASM42118v1	-	DSM 21552
Paenibacillus panacisoli DSM 21345	1122922	PRJNA195798	195798	Terrabacteria group	Firmicutes	6.32641	48.3	-	AUFO01	43	5608	5355	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441525	GCA_000426545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/545/GCA_000426545.1_ASM42654v1	-	DSM 21345
Paucisalibacillus globulus DSM 18846	1122940	PRJNA195799	195799	Terrabacteria group	Firmicutes	4.23819	35.8	-	AXVK01	35	4170	4004	10/25/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440721	GCA_000482485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/485/GCA_000482485.1_ASM48248v1	-	DSM 18846
Psychrilyobacter atlanticus DSM 19335	1123032	PRJNA195804	195804	Fusobacteria	Fusobacteriia	3.53932	31.9	-	AUFS01	3	3312	3196	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441527	GCA_000426625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/625/GCA_000426625.1_ASM42662v1	-	DSM 19335
Runella limosa DSM 17973	1123077	PRJNA195806	195806	FCB group	Bacteroidetes/Chlorobi group	7.55597	44.3	-	AXVJ01	78	6182	6012	10/25/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440771	GCA_000482465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/465/GCA_000482465.1_ASM48246v1	-	DSM 17973
Nakamurella lactea DSM 19367	1123241	PRJNA195807	195807	Terrabacteria group	Actinobacteria	5.82086	68.9	-	AUFT01	27	5142	4974	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440642	GCA_000426645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/645/GCA_000426645.1_ASM42664v1	-	DSM 19367
Solimonas flava DSM 18980	1123257	PRJNA195810	195810	Proteobacteria	Gammaproteobacteria	4.4602	68.9	-	AUFV01	27	4003	3886	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440644	GCA_000426685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/685/GCA_000426685.1_ASM42668v1	-	DSM 18980
Spirochaeta cellobiosiphila DSM 17781	1123275	PRJNA195812	195812	Spirochaetes	Spirochaetia	3.94985	37	-	AUFW01	29	3705	3601	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441512	GCA_000426705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/705/GCA_000426705.1_ASM42670v1	-	DSM 17781
Aminiphilus circumscriptus DSM 16581	1304874	PRJNA195816	195816	Synergistetes	Synergistia	3.22321	60.4	-	JAFY01	7	2940	2802	1/14/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02584933	GCA_000526375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/375/GCA_000526375.1_ASM52637v1	-	DSM 16581
Sporocytophaga myxococcoides DSM 11118	926565	PRJNA195817	195817	FCB group	Bacteroidetes/Chlorobi group	6.34433	36.1	-	AUFX01	21	5157	5031	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441513	GCA_000426725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/725/GCA_000426725.1_ASM42672v1	-	DSM 11118
Bifidobacterium choerinum	35760	PRJNA239844	239844	Terrabacteria group	Actinobacteria	2.09612	65.5	-	JGYU01	20	1734	1591	8/18/14	4/9/17	Contig	University of Parma	SAMN02673432	GCA_000741135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/135/GCA_000741135.1_Bifcho	"2,508,549,325,107,960"	LMG 10510
Prevotella albensis DSM 11370 = JCM 12258	1122978	PRJNA195800	195800	FCB group	Bacteroidetes/Chlorobi group	2.66885	41.2	-	AUFP01	44	2262	2141	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440641	GCA_000426565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/565/GCA_000426565.1_ASM42656v1	-	DSM 11370
Aminobacterium mobile DSM 12262	1304875	PRJNA195827	195827	Synergistetes	Synergistia	2.10597	43.8	-	JAFZ01	5	2014	1946	1/14/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02584934	GCA_000526395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/395/GCA_000526395.1_ASM52639v1	-	DSM 12262
Caldicoprobacter oshimai DSM 21659	1304880	PRJNA195830	195830	Terrabacteria group	Firmicutes	2.72504	44.8	-	JAGB01	6	2544	2398	1/14/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02584936	GCA_000526435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/435/GCA_000526435.1_ASM52643v1	-	DSM 21659
Desulfitibacter alkalitolerans DSM 16504	1304884	PRJNA195831	195831	Terrabacteria group	Firmicutes	4.36135	39.2	-	JHVU01	24	4240	4096	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02953000	GCA_000620305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/305/GCA_000620305.1_ASM62030v1	-	DSM 16504
Desulfotignum balticum DSM 7044	1304886	PRJNA195832	195832	Proteobacteria	delta/epsilon subdivisions	5.11876	51.2	-	ATWO01	5	4814	4623	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440581	GCA_000421285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/285/GCA_000421285.1_ASM42128v1	-	DSM 7044
Labrys sp. WJW	1737983	PRJNA324500	324500	Proteobacteria	Alphaproteobacteria	7.63683	63.8	-	LYXZ01	140	7019	6835	6/24/16	4/13/17	Contig	Dalian University of Technology	SAMN05207068	GCA_001676615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/615/GCA_001676615.1_ASM167661v1	-	WJW
Sulfurospirillum arcachonense DSM 9755	1123326	PRJNA195821	195821	Proteobacteria	delta/epsilon subdivisions	2.65638	30.4	-	JFBL01	42	2656	2581	2/27/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02199325	GCA_000597725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/725/GCA_000597725.1_ASM59772v1	-	DSM 9755
Veillonella montpellierensis DSM 17217	1123490	PRJNA195824	195824	Terrabacteria group	Firmicutes	1.87091	37	-	AUFY01	40	1642	1541	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440645	GCA_000426745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/745/GCA_000426745.1_ASM42674v1	-	DSM 17217
[Clostridium] sphenoides JCM 1415	1297793	PRJEB16486	349370	Terrabacteria group	Firmicutes	5.30023	43.8	chromosome I:LT630003.1	-	1	4869	4662	10/29/16	10/29/16	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN02745906	GCA_900105615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/615/GCA_900105615.1_IMG-taxon_2675902961_annotated_assembly	-	ATCC 19403
Desulfovibrio vulgaris RCH1	573059	PRJNA32603	32603	Proteobacteria	delta/epsilon subdivisions	3.73436	63.2409	chromosome:NC_017310.1/CP002297.1; plasmid pDEVAL01:NC_017311.1/CP002298.1	-	2	3420	3308	11/5/10	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002688	GCA_000166115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/115/GCA_000166115.1_ASM16611v1	-	RCH1
Geobacter bremensis R1	1304887	PRJNA195887	195887	Proteobacteria	delta/epsilon subdivisions	4.65103	60.3	-	AUGE01	82	4192	4001	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441174	GCA_000426865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/865/GCA_000426865.1_ASM42686v1	-	R1
Dechloromonas agitata is5	1304883	PRJNA195888	195888	Proteobacteria	Betaproteobacteria	3.62723	62.8	-	JAET01	1	3507	3403	1/10/14	6/20/17	Scaffold	DOE Joint Genome Institute	SAMN02584944	GCA_000519045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/045/GCA_000519045.1_ASM51904v1	-	is5
Thermocrinis sp. GBS	1313265	PRJNA195645	195645	Aquificae	Aquificae	1.31563	41.3	-	JNIE01	10	1465	1385	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841145	GCA_000702425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/425/GCA_000702425.1_ASM70242v1	-	GBS
Paenibacillus uliginis N3/975	1313296	PRJEB20439	382934	Terrabacteria group	Firmicutes	6.45219	45	chromosome I:LT840184.1	-	1	6124	5738	4/19/17	4/19/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05661091	GCA_900177425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/425/GCA_900177425.1_IMG-taxon_2529292568_annotated_assembly	-	N3/975
Thermonema rossianum DSM 10300	1313301	PRJNA195851	195851	FCB group	Bacteroidetes/Chlorobi group	2.95497	48.8	-	AUGC01	24	2632	2546	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440846	GCA_000426825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/825/GCA_000426825.1_ASM42682v1	-	DSM 10300
Streptomyces prunicolor NBRC 13075	1312234	PRJDB1071	195905	Terrabacteria group	Actinobacteria	11.7606	69.7	-	BARF01	202	10832	10296	4/10/13	5/19/17	Contig	National Institute of Technology and Evaluation	SAMD00041815	GCA_000367365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/365/GCA_000367365.1_ASM36736v1	-	NBRC 13075
Chitinivibrio alkaliphilus ACht1	1313304	PRJNA195589	195589	FCB group	Fibrobacteres	2.59133	46.2	-	ASJR01	99	2341	2240	10/18/13	4/9/17	Contig	Centre Bioengineering RAS	SAMN02469433	GCA_000474745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/745/GCA_000474745.1_Acht1_1	24112708	ACht1
Desulfovibrio vulgaris str. Hildenborough	882	PRJNA51	51	Proteobacteria	delta/epsilon subdivisions	3.77316	63.2394	chromosome:NC_002937.3/AE017285.1; plasmid pDV:NC_005863.1/AE017286.1	-	2	3638	3535	10/3/01	8/28/16	Complete Genome	TIGR	SAMN02603973	GCA_000195755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/755/GCA_000195755.1_ASM19575v1	15077118	Hildenborough
Desulfotignum phosphitoxidans DSM 13687	1286635	PRJNA187267	187267	Proteobacteria	delta/epsilon subdivisions	4.99876	51.3	-	APJX01	38	4745	4556	4/3/13	5/18/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02469830	GCA_000350545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/545/GCA_000350545.1_DPO2	23704177	DSM 13687
Sphingomonas sp. JJ-A5	1921510	PRJNA354679	354679	Proteobacteria	Alphaproteobacteria	3.78798	63.2322	chromosome:NZ_CP018221.1/CP018221.1; plasmid pHSL1:NZ_CP018222.1/CP018222.1; plasmid pHSL2:NZ_CP018223.1/CP018223.1; plasmid pHSL3:NZ_CP018224.1/CP018224.1; plasmid pHSL4:NZ_CP018225.1/CP018225.1	-	5	3926	3764	12/7/16	4/16/17	Complete Genome	"College of Agriculture and Life Science, Seoul National University"	SAMN06050156	GCA_001890385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/385/GCA_001890385.1_ASM189038v1	-	JJ-A5
Alicyclobacillus mali NBRC 102425	1314748	PRJDB1078	196451	Terrabacteria group	Firmicutes	2.78697	61.9	-	BCSG01	85	2726	2578	2/10/16	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00046473	GCA_001570745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/745/GCA_001570745.1_ASM157074v1	-	NBRC 102425
Azohydromonas lata NBRC 102462	1314749	PRJDB1079	196452	Proteobacteria	Betaproteobacteria	7.18325	69	-	BCTC01	342	6321	5987	2/18/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046724	GCA_001571085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/085/GCA_001571085.1_ASM157108v1	-	NBRC 102462
Bacillus cohnii NBRC 15565	1314751	PRJDB1081	196454	Terrabacteria group	Firmicutes	4.89726	35.7	-	BCUW01	206	4923	4806	2/27/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046992	GCA_001591425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/425/GCA_001591425.1_ASM159142v1	-	NBRC 15565
Bacillus fumarioli NBRC 102428	1314754	PRJDB1084	196457	Terrabacteria group	Firmicutes	3.29421	40.4	-	BCUZ01	283	3245	3061	2/27/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046997	GCA_001591485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/485/GCA_001591485.1_ASM159148v1	-	NBRC 102428
Rubidibacter lacunae KORDI 51-2	582515	PRJNA196392	196392	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.15366	56.2	-	ASSJ01	99	3466	3281	10/7/13	4/17/17	Contig	Korea Institute of Ocean Science and Technology	SAMN02470146	GCA_000473895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/895/GCA_000473895.1_KS51_v1	-	KORDI 51-2
Maricaulis sp. W15	1772333	PRJNA306252	306252	Proteobacteria	Alphaproteobacteria	3.50784	63.1	-	LQXG01	22	3304	3234	12/29/16	4/16/17	Contig	Duke University Marine Lab	SAMN04348725	GCA_001924955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/924/955/GCA_001924955.1_ASM192495v1	-	W15
Burkholderia sp. CCGE1003	640512	PRJNA37721	37721	Proteobacteria	Betaproteobacteria	7.04359	63.2315	chromosome 1:NC_014539.1/CP002217.1; chromosome 2:NC_014540.1/CP002218.1	-	2	6143	5931	9/23/10	5/18/17	Complete Genome	US DOE Joint Genome Institute	SAMN00008621	GCA_000148685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/685/GCA_000148685.1_ASM14868v1	-	CCGE1003
Phaeobacter sp. S26	1569354	PRJNA266107	266107	Proteobacteria	Alphaproteobacteria	4.21639	60.1	-	JSWK01	59	4035	3938	1/21/15	4/10/17	Scaffold	Technical University of Denmark	SAMN03159524	GCA_000826835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/835/GCA_000826835.1_ASM82683v1	-	S26
[Clostridium] indolis DSM 755	1304881	PRJNA195868	195868	Terrabacteria group	Firmicutes	6.3837	44.9	-	AZUI01	1	5822	5630	1/3/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02597187	GCA_000526995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/995/GCA_000526995.1_ASM52699v1	-	DSM 755
[Clostridium] josui JCM 17888	1291050	PRJNA195880	195880	Terrabacteria group	Firmicutes	4.46968	36.1	-	JAGE01	2	3930	3696	1/14/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02584941	GCA_000526495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/495/GCA_000526495.1_ASM52649v1	-	JCM 17888
Bacillus drentensis	220684	PRJNA315349	315349	Terrabacteria group	Firmicutes	5.30531	38.9	-	LUUU01	3	5165	4892	5/3/16	4/12/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04544313	GCA_001636415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/415/GCA_001636415.1_ASM163641v1	-	FJAT-10044
Bacillus firmus DS1	1307436	PRJNA193594	193594	Terrabacteria group	Firmicutes	4.97124	41.5	-	APVL01	72	4998	4819	2/7/14	4/9/17	Contig	HUAZHONG AGRICULTURAL UNIVERSITY	SAMN02952946	GCA_000565285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/285/GCA_000565285.1_pBF	27118554	DS1
Aurantimonas sp. Leaf443	1736378	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	3.90807	69.9	-	LMRD01	13	3579	3483	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151768	GCA_001425575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/575/GCA_001425575.1_Leaf443	26633631	Leaf443
Holospora undulata HU1	1321371	PRJNA196952	196952	Proteobacteria	Alphaproteobacteria	1.40264	36.1	-	ARPM03	203	1442	1188	5/3/13	4/9/17	Scaffold	Yamaguchi University	SAMN02472140	GCA_000388175.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/175/GCA_000388175.3_ASM38817v3	23969064	HU1
Tetrasphaera elongata Lp2	1193181	PRJEB34	196957	Terrabacteria group	Actinobacteria	3.17469	68.8	-	CAIZ01	1	3104	2843	4/10/13	4/17/17	Scaffold	"Department of Biotechnology, Chemistry and Environmental Engineering, Aalborg University"	SAMEA2272747	GCA_000367525.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/525/GCA_000367525.2_ASM36752v2	23178666	Lp2
Phaeospirillum fulvum MGU-K5	1316936	PRJNA196552	196552	Proteobacteria	Alphaproteobacteria	3.7694	63.9	-	AQPH01	178	3489	3234	7/31/13	4/8/17	Contig	Centre Bioengineering RAS	SAMN02469434	GCA_000442515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/515/GCA_000442515.1_PhaespirillumFulvum_1.0	-	MGU-K5
Shimia sp. SK013	1389006	PRJNA277163	277163	Proteobacteria	Alphaproteobacteria	4.04981	57.2	-	LAJH01	28	3979	3897	9/16/15	4/11/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03387008	GCA_001292625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/625/GCA_001292625.1_ASM129262v1	27042262	SK013
Aquimarina sp. RZW4-3-2	1642818	PRJNA308409	308409	FCB group	Bacteroidetes/Chlorobi group	6.18689	32.3	-	LQRT01	60	5197	5093	4/27/16	4/12/17	Contig	Xinxiang Medical University	SAMN04395152	GCA_001632745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/745/GCA_001632745.1_ASM163274v1	-	RZW4-3-2
Stappia sp. ES.058	1881061	PRJEB16493	349423	Proteobacteria	Alphaproteobacteria	4.62625	63.6	chromosome I:NZ_LT629784.1/LT629784.1	-	1	4306	4168	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05428979	GCA_900105595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/595/GCA_900105595.1_IMG-taxon_2684623039_annotated_assembly	-	ES.058
Aggregatibacter sp. oral taxon 458 str. W10330	1321772	PRJNA198875	198875	Proteobacteria	Gammaproteobacteria	2.01662	43	-	AWSH01	45	1954	1830	9/10/13	4/17/17	Scaffold	Washington University	SAMN02436891	GCA_000466335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/335/GCA_000466335.1_ASM46633v1	-	W10330
Butyricicoccus sp. BB10	1945634	PRJNA341691	341691	Terrabacteria group	Firmicutes	2.89692	52.6	-	NHOC01	29	2857	2632	5/25/17	5/31/17	Contig	USDA-ARS	SAMN06279795	GCA_002157465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/465/GCA_002157465.1_ASM215746v1	-	BB10
Polaromonas jejuensis NBRC 106434	1321608	PRJDB1088	197338	Proteobacteria	Betaproteobacteria	5.13465	62.9	-	BCYO01	79	4908	4706	3/11/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046740	GCA_001598235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/235/GCA_001598235.1_ASM159823v1	-	NBRC 106434
Pandoraea thiooxydans	445709	PRJNA309453	309453	Proteobacteria	Betaproteobacteria	4.46418	63.2	chromosome:NZ_CP014839.1/CP014839.1	-	1	4147	4040	1/4/17	4/16/17	Complete Genome	Chungbuk National University	SAMN04433088	GCA_001931675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/675/GCA_001931675.1_ASM193167v1	-	ATSB16
Clostridium diolis DSM 15410	1316937	PRJNA196562	196562	Terrabacteria group	Firmicutes	5.85389	29.7	-	AQQG01	175	5142	4917	6/10/13	4/17/17	Contig	"State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University"	SAMN02470960	GCA_000409695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/695/GCA_000409695.1_Clostridium_diolis_DSM_15410_Genome_sequencing	23908285	DSM 15410
Gordonibacter sp. An230	1965592	PRJNA377666	377666	Terrabacteria group	Actinobacteria	3.87703	64.1	-	NFJP01	73	3137	2968	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473668	GCA_002159915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/915/GCA_002159915.1_ASM215991v1	-	An230
Variovorax soli NBRC 106424	1321611	PRJDB1091	197341	Proteobacteria	Betaproteobacteria	5.60043	67.8	-	BCUU01	239	5321	5046	2/27/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046739	GCA_001591385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/385/GCA_001591385.1_ASM159138v1	-	NBRC 106424
Pseudomonas pelagia CL-AP6	1323663	PRJNA197439	197439	Proteobacteria	Gammaproteobacteria	4.64231	57.4	-	AROI01	81	4254	4104	6/13/13	4/17/17	Contig	KOPRI	SAMN02470162	GCA_000410875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/875/GCA_000410875.1_KCCM90073	24009125	CL-AP6
Oerskovia turbata	1713	PRJNA238534	238534	Terrabacteria group	Actinobacteria	4.02867	72.2	-	JOFV01	74	3561	3441	7/2/14	4/17/17	Contig	University of Illinois	SAMN02645273	GCA_000718325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/325/GCA_000718325.1_ASM71832v1	-	NRRL B-8019
Marinimicrobia bacterium JGI 0000059-L03	1047061	PRJNA192321	192321	FCB group	Candidatus Marinimicrobia	0.59765	47.8	-	AQPI01	41	-	-	4/15/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441408	GCA_000365325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/325/GCA_000365325.1_ASM36532v1	23851394	JGI 0000059-L03
Moraxella caprae DSM 19149	1122244	PRJNA198543	198543	Proteobacteria	Gammaproteobacteria	2.60223	44.4	-	AUGF01	103	2571	2351	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441175	GCA_000426885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/885/GCA_000426885.1_ASM42688v1	-	DSM 19149
Maritimibacter sp. HL-12	1162418	PRJEB20444	382922	Proteobacteria	Alphaproteobacteria	3.60648	65.7	-	FXBQ01	2	3568	3497	4/21/17	5/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05661107	GCA_900177545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/545/GCA_900177545.1_IMG-taxon_2545555844_annotated_assembly	-	HL-12
Crenarchaeota archaeon SCGC AAA471-B05	1052801	PRJNA192282	192282	TACK group	Crenarchaeota	1.4133	28.7	-	AQYM01	33	-	-	4/23/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441387	GCA_000380705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/705/GCA_000380705.1_ASM38070v1	23851394	SCGC AAA471-B05
Pseudomonas putida	303	PRJNA286152	286152	Proteobacteria	Gammaproteobacteria	5.80862	63.2	chromosome:NZ_CP011789.1/CP011789.1	-	1	5301	5106	5/2/16	4/5/17	Complete Genome	Hunan Agricultural University	SAMN03765648	GCA_001636055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/055/GCA_001636055.1_ASM163605v1	-	PC2
Kamptonema formosum PCC 6407	402777	PRJNA158733	158733	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.89406	43.4	-	ALVI01	12	5798	5489	1/17/13	4/17/17	Scaffold	JGI	SAMN02261340	GCA_000332155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/155/GCA_000332155.1_ASM33215v1	23277585	PCC 6407
Spirulina subsalsa PCC 9445	1173029	PRJNA158827	158827	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.3236	47.4	-	ALVR01	2	4632	4389	11/5/12	5/19/17	Scaffold	JGI	SAMN02261255	GCA_000314005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/005/GCA_000314005.1_ASM31400v1	23277585	PCC 9445
Anaerococcus obesiensis ph10	1118056	PRJEA82075	82075	Terrabacteria group	Firmicutes	2.03717	29.4	-	CAGV01	5	1994	1783	5/30/12	4/17/17	Scaffold	URMITE CNRS UMR 6236 IRD 198	SAMEA2272036	GCA_000311745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/745/GCA_000311745.1_ASM31174v1	-	ph10
Peptoniphilus timonensis JC401	1095770	PRJEA82283	82283	Terrabacteria group	Firmicutes	1.7586	30.9	-	CAHE01	7	1743	1383	5/30/12	4/8/17	Scaffold	URMITE CNRS UMR 6236 IRD 198	SAMEA2272625	GCA_000312025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/025/GCA_000312025.1_ASM31202v1	-	JC401
Alistipes senegalensis JC50	1033732	PRJEA82331	82331	FCB group	Bacteroidetes/Chlorobi group	4.01761	58.3	-	CAHI01	6	3211	3089	6/1/12	4/17/17	Scaffold	URMITE CNRS UMR 6236 IRD 198	SAMEA2272561	GCA_000312145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/145/GCA_000312145.1_ASM31214v1	-	-
Lactobacillus ingluviei str. Autruche 4	1203076	PRJEB104	169213	Terrabacteria group	Firmicutes	2.01383	50.9	-	CAKF01	8	1945	1835	6/27/12	4/8/17	Scaffold	Seydina	SAMEA2272482	GCA_000312405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/405/GCA_000312405.1_ASM31240v1	-	Autruche 4
Oscillibacter ruminantium GH1	1007096	PRJDB197	171362	Terrabacteria group	Firmicutes	3.10824	54.9	-	BAGW01	29	2956	2843	8/29/12	4/8/17	Scaffold	Korea Research Institute of Bioscience and Biotechnology	SAMD00036625	GCA_000307265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/265/GCA_000307265.1_ASM30726v1	23105088	GH1
Anaerococcus senegalensis JC48	1033733	PRJEA70539	70539	Terrabacteria group	Firmicutes	1.79583	28.6	-	CAEK01	21	1740	1604	11/19/12	4/17/17	Scaffold	laboratoire URMITE CNRS 6236	SAMEA2272803	GCA_000321005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/005/GCA_000321005.2_ASM32100v2	-	type strain: JC17
Dyella japonica UNC79MFTsu3.2	1380365	PRJNA213753	213753	Proteobacteria	Gammaproteobacteria	5.01851	67.2	-	JIBD01	16	4390	4285	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743944	GCA_000620485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/485/GCA_000620485.1_ASM62048v1	-	UNC79MFTsu3.2
Mycoplasma meleagridis ATCC 25294	1264554	PRJNA182348	182348	Terrabacteria group	Tenericutes	0.634182	26	-	JZXN01	22	541	494	4/6/15	4/10/17	Contig	Institut Pasteur Tunis	SAMN03401915	GCA_000969625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/625/GCA_000969625.1_ASM96962v1	25999574	ATCC 25294
Curtobacterium flaccumfaciens UCD-AKU	1292022	PRJNA188733	188733	Terrabacteria group	Actinobacteria	3.70532	70.8	-	APJN01	37	3508	3376	3/28/13	4/8/17	Scaffold	UC Davis	SAMN02471293	GCA_000349565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/565/GCA_000349565.1_Curtobacterium_flaccumfaciens_UCD-AKU	23682147	UCD-AKU
Eubacterium brachy ATCC 33089	1321814	PRJNA198877	198877	Terrabacteria group	Firmicutes	1.54452	37.9	-	AXUD01	19	1419	1342	10/25/13	4/17/17	Scaffold	Washington University	SAMN02436867	GCA_000488855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/855/GCA_000488855.1_ASM48885v1	-	ATCC 33089
Treponema lecithinolyticum ATCC 700332	1321815	PRJNA198879	198879	Spirochaetes	Spirochaetia	2.34089	43.8	-	AWVH01	21	2118	2021	9/16/13	4/17/17	Scaffold	Washington University	SAMN02436727	GCA_000468055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/055/GCA_000468055.1_ASM46805v1	-	ATCC 700332
Gemella bergeriae ATCC 700627	1321820	PRJNA198886	198886	Terrabacteria group	Firmicutes	1.60451	30.3	-	AWVP01	89	1505	1404	9/18/13	4/17/17	Scaffold	Washington University	SAMN02436752	GCA_000469465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/465/GCA_000469465.1_ASM46946v1	-	ATCC 700627
Mitsuokella sp. oral taxon 131 str. W9106	1321781	PRJNA198888	198888	Terrabacteria group	Firmicutes	2.31336	56.6	-	AWVT01	25	2169	2060	9/19/13	4/9/17	Scaffold	Washington University	SAMN02436729	GCA_000469545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/545/GCA_000469545.1_ASM46954v1	-	W9106
Cellulophaga geojensis KL-A	1328323	PRJNA200358	200358	FCB group	Bacteroidetes/Chlorobi group	3.88812	31.9	-	ARZX01	109	3480	3398	2/11/14	4/17/17	Contig	State Oceanic Administration	SAMN02952948	GCA_000568425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/425/GCA_000568425.1_KLA	24604651	KL-A
Paucibacter sp. KCTC 42545	1768242	PRJNA305460	305460	Proteobacteria	Betaproteobacteria	5.16916	63.2	chromosome:NZ_CP013692.1/CP013692.1	-	1	4475	4296	12/22/15	4/11/17	Complete Genome	Korean Research Institute of BioSicence and BioTechnology	SAMN04325384	GCA_001477625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/625/GCA_001477625.1_ASM147762v1	-	KCTC 42545
Pandoraea thiooxydans	445709	PRJNA285516	285516	Proteobacteria	Betaproteobacteria	4.46419	63.2	chromosome:NZ_CP011568.3/CP011568.3	-	1	4138	4032	6/2/15	4/16/17	Complete Genome	University of Malaya	SAMN03754653	GCA_001017775.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/775/GCA_001017775.3_ASM101777v3	-	DSM 25325
Lactobacillus shenzhenensis LY-73	1231336	PRJNA200754	200754	Terrabacteria group	Firmicutes	3.27168	56.3	-	AVAA01	62	2998	2896	9/20/13	4/9/17	Scaffold	BGI	SAMN02469385	GCA_000469325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/325/GCA_000469325.1_ASM46932v1	24265500	LY-73
Chryseobacterium oranimense G311	1300143	PRJEB1544	200915	FCB group	Bacteroidetes/Chlorobi group	4.45705	37.7	-	CCAV01	15	4188	3795	3/19/14	4/9/17	Contig	URMITE	SAMEA3138983	GCA_000612925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/925/GCA_000612925.1_G311	-	G311
Pseudomonas cremoricolorata	157783	PRJNA261093	261093	Proteobacteria	Gammaproteobacteria	4.7804	63.2	chromosome:NZ_CP009455.1/CP009455.1	-	1	4352	4199	9/29/14	4/9/17	Complete Genome	UNIVERSITY OF MALAYA	SAMN03068908	GCA_000759535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/535/GCA_000759535.1_ASM75953v1	-	ND07
Agrococcus sp. Marseille-P2731	1841862	PRJEB17684	352804	Terrabacteria group	Actinobacteria	3.02102	71.8	-	FPEG01	3	2878	2790	11/8/16	4/16/17	Contig	URMITE	SAMEA4534876	GCA_900117395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/395/GCA_900117395.1_PRJEB17684	-	Marseille-P2731
Ruania albidiflava DSM 18029	1123065	PRJNA195805	195805	Terrabacteria group	Actinobacteria	4.17492	70	-	ATWL01	60	3845	3641	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440902	GCA_000421225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/225/GCA_000421225.1_ASM42122v1	-	DSM 18029
Pseudomonas stutzeri DSM 10701	1123519	PRJNA78211	78211	Proteobacteria	Gammaproteobacteria	4.17412	63.2	chromosome:NC_018177.1/CP003725.1	-	1	3931	3772	7/18/12	5/19/17	Complete Genome	Universitat de les Illes Balears	SAMN02604107	GCA_000279165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/165/GCA_000279165.1_ASM27916v1	22965097	DSM 10701
Novosphingobium lindaniclasticum LE124	1096930	PRJNA201004	201004	Proteobacteria	Alphaproteobacteria	4.85793	64.6	-	ATHL01	156	4555	4308	8/9/13	4/8/17	Contig	University of Delhi	SAMN02471710	GCA_000445125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/125/GCA_000445125.1_ASM44512v1	24029761	LE124
Sphingobium quisquiliarum P25	1329909	PRJNA201016	201016	Proteobacteria	Alphaproteobacteria	4.17055	64	-	ATHO01	181	4105	3833	8/9/13	4/17/17	Contig	University Of Delhi	SAMN02471719	GCA_000445065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/065/GCA_000445065.1_ASM44506v1	24029763	P25
Microbispora sp. ATCC PTA-5024	316330	PRJNA201009	201009	Terrabacteria group	Actinobacteria	8.53843	71.9	-	AWEV01	7	7852	7370	12/19/13	4/17/17	Scaffold	LAPTOP	SAMN02597373	GCA_000511135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/135/GCA_000511135.2_Mb_MiSeq_454_130116	24459268	ATCC PTA-5024
Thermoanaerobacterium sp. RBIITD	1550240	PRJEB70023	400156	Terrabacteria group	Firmicutes	3.40309	32.5	chromosome I:LT906662.1	-	1	3440	3010	9/2/17	9/2/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05660242	GCA_900205865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/205/865/GCA_900205865.1_IMG-taxon_2595698254_annotated_assembly	-	RBIITD
Agarivorans albus MKT 106	1331007	PRJDB1104	202469	Proteobacteria	Gammaproteobacteria	4.73428	44.2	-	BARX01	67	4330	4153	5/30/13	4/17/17	Contig	"National Research Institute of Fisheries Science, Fisheries Research Agency"	SAMD00036740	GCA_000414175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/175/GCA_000414175.1_ASM41417v1	23868120	-
Firmicutes bacterium CAG:110	1263000	PRJEB690	202471	Terrabacteria group	Firmicutes	2.50291	56.7	-	CAXG01	182	2345	2311	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138619	GCA_000434635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/635/GCA_000434635.1_MGS110	-	-
Faecalibacterium sp. An192	1965581	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.47813	58.9	-	NFKB01	164	3265	3084	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473655	GCA_002160175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/175/GCA_002160175.1_ASM216017v1	-	An192
Sphingobium sp. C1	1673076	PRJNA397800	397800	Proteobacteria	Alphaproteobacteria	4.60264	63.1957	chromosome I:NZ_CP022745.1/CP022745.1; chromosome II:NZ_CP022746.1/CP022746.1; plasmid p1:NZ_CP022747.1/CP022747.1; plasmid p2:NZ_CP022748.1/CP022748.1; plasmid p3:NZ_CP022749.1/CP022749.1; plasmid p4:NZ_CP022750.1/CP022750.1; plasmid p5:NZ_CP022751.1/CP022751.1	-	7	4462	4173	9/8/17	9/11/17	Complete Genome	Guangdong Institute of Microbiology	SAMN07488776	GCA_002288285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/285/GCA_002288285.1_ASM228828v1	-	C1
Pseudomonas sp. TCU-HL1	1856685	PRJNA324156	324156	Proteobacteria	Gammaproteobacteria	6.2567	63.1899	chromosome:NZ_CP015992.1/CP015992.1; plasmid pTCUH:NZ_CP015993.1/CP015993.1	-	2	5811	5570	8/23/16	4/13/17	Complete Genome	Tzu Chi University	SAMN05195958	GCA_001708505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/505/GCA_001708505.1_ASM170850v1	27542933	TCU-HL1
Firmicutes bacterium CAG:114	1263001	PRJEB693	202474	Terrabacteria group	Firmicutes	2.3397	58.2	-	CAXW01	148	2253	2222	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138651	GCA_000435295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/295/GCA_000435295.1_MGS114	-	-
Paraburkholderia sprentiae WSM5005	754502	PRJNA344837	344837	Proteobacteria	Betaproteobacteria	7.82954	63.1824	chromosome 1:NZ_CP017561.1/CP017561.1; chromosome 2:NZ_CP017562.1/CP017562.1; plasmid pl1WSM5005:NZ_CP017563.1/CP017563.1; plasmid pl2WSM5005:NZ_CP017565.1/CP017565.1; plasmid pl3WSM5005:NZ_CP017564.1/CP017564.1	-	5	7134	6684	11/3/16	4/13/17	Complete Genome	Murdoch University	SAMN05846344	GCA_001865575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/575/GCA_001865575.1_ASM186557v1	-	WSM5005
Microbacterium maritypicum MF109	1333857	PRJNA202935	202935	Terrabacteria group	Actinobacteria	3.99692	68.2	-	ATAO01	260	3841	3724	8/28/13	4/17/17	Contig	University of Illinois at Chicago	SAMN02471823	GCA_000455825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/825/GCA_000455825.1_ASM45582v1	24092793	MF109
Corynebacterium falsenii DSM 44353	1451189	PRJNA235944	235944	Terrabacteria group	Actinobacteria	2.71962	63.1768	chromosome:NZ_CP007156.1/CP007156.1; plasmid phiCFAL8171I:NZ_CP007157.1/CP007157.1	-	2	2379	2253	2/3/14	4/9/17	Complete Genome	Bielefeld University	SAMN02641485	GCA_000525655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/655/GCA_000525655.1_ASM52565v1	24604654	BL 8171
Paenibacillus sophorae	1333845	PRJEB16930	351098	Terrabacteria group	Firmicutes	5.80703	50.2	-	FODH01	41	5606	5346	10/29/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487895	GCA_900110315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/315/GCA_900110315.1_IMG-taxon_2617270876_annotated_assembly	-	CGMCC 1.10238
Paenibacillus zanthoxyli JH29	1333860	PRJNA202954	202954	Terrabacteria group	Firmicutes	5.04568	50.9	-	ASSD01	714	5052	4461	1/15/14	4/17/17	Contig	China Agricultural University	SAMN02597340	GCA_000520715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/715/GCA_000520715.1_s8	-	JH29
Salinibacillus aidingensis MSP4	1292032	PRJNA188923	188923	Terrabacteria group	Firmicutes	7.42169	42.4	-	APIS01	21	-	-	5/16/13	1/8/14	Scaffold	Directorate of Groundnut Research (Indian Council of Agricultural Research)	SAMN02469741	GCA_000400005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/005/GCA_000400005.1_GS_De_Novo_Assembler	23833129	MSP4
Bifidobacterium thermacidophilum subsp. thermacidophilum DSM 15837	1121111	PRJNA195782	195782	Terrabacteria group	Actinobacteria	2.22359	60.4	-	AUFI01	14	1742	1642	7/10/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441522	GCA_000426425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/425/GCA_000426425.1_ASM42642v1	-	DSM 15837
Paenibacillus forsythiae T98	1333861	PRJNA202955	202955	Terrabacteria group	Firmicutes	5.0813	52.9	-	ASSC01	896	4908	4267	1/15/14	4/17/17	Contig	China Agricultural University	SAMN02597339	GCA_000520735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/735/GCA_000520735.1_s9	-	T98
Paenarthrobacter nicotinovorans 231Sha2.1M6	1304876	PRJNA195858	195858	Terrabacteria group	Actinobacteria	4.77255	62.7	-	AZVC01	34	4376	4222	1/3/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02597207	GCA_000514015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/015/GCA_000514015.1_ASM51401v1	-	231Sha2.1M6
Morganella sp. HMSC11D09	1581087	PRJNA269856	269856	Proteobacteria	Gammaproteobacteria	3.85818	51	-	LUAD01	88	3744	3554	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03604130	GCA_001807955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/955/GCA_001807955.1_ASM180795v1	-	HMSC11D09
Methylocystis bryophila	655015	PRJNA376255	376255	Proteobacteria	Alphaproteobacteria	4.70797	63.148	chromosome:NZ_CP019948.1/CP019948.1; plasmid p1:NZ_CP019949.1/CP019949.1	-	2	4413	4268	5/2/17	5/26/17	Complete Genome	Max Planck Institute for Terrestrial Microbiology	SAMN06368462	GCA_002117405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/405/GCA_002117405.1_ASM211740v1	-	S285
Halarchaeum acidiphilum MH1-52-1	1261545	PRJDB708	203272	Euryarchaeota	Halobacteria	2.62897	67.4	-	BATA01	165	2718	2333	9/11/13	4/9/17	Contig	Japan Agency for Marine-Earth Science and Technology	SAMD00036764	GCA_000474235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/235/GCA_000474235.1_ASM47423v1	-	JCM 16109
Desulfovibrio vulgaris DP4	391774	PRJNA17227	17227	Proteobacteria	delta/epsilon subdivisions	3.66139	63.1464	chromosome:NC_008751.1/CP000527.1; plasmid pDVUL01:NC_008741.1/CP000528.1	-	2	3295	3149	1/3/07	4/6/17	Complete Genome	DOE Joint Genome Institute	SAMN02598381	GCA_000015485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/485/GCA_000015485.1_ASM1548v1	-	DP4
Crenarchaeota archaeon SCGC AAA471-L14	1052805	PRJNA192313	192313	TACK group	Crenarchaeota	0.940474	28.8	-	ASMI01	63	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440535	GCA_000399825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/825/GCA_000399825.1_ASM39982v1	23851394	SCGC AAA471-L14
Crenarchaeota archaeon SCGC AAA471-O08	1052806	PRJNA192330	192330	TACK group	Crenarchaeota	1.14991	28.7	-	ASMJ01	24	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440536	GCA_000398765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/765/GCA_000398765.1_ASM39876v1	23851394	SCGC AAA471-O08
Burkholderia sp. RPE64	758793	PRJDB1103	205117	Proteobacteria	Betaproteobacteria	6.96449	63.1457	chromosome 1:NC_021287.1/AP013058.1; chromosome 2:NC_021294.1/AP013059.1; chromosome 3:NC_021288.1/AP013060.1; plasmid p1:NC_021289.1/AP013061.1; plasmid p2:NC_021295.1/AP013062.1	-	5	6408	6271	5/21/13	4/17/17	Complete Genome	National Institute for Basic Biology	SAMD00012854	GCA_000402035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/035/GCA_000402035.1_ASM40203v1	23833137	-
Paraburkholderia phenoliruptrix BR3459a	1229205	PRJNA174166	174166	Proteobacteria	Betaproteobacteria	7.65113	63.1193	chromosome 1:NC_018695.1/CP003863.1; chromosome 2:NC_018672.1/CP003864.1; plasmid pSYMBR3459:NC_018696.1/CP003865.1	-	3	6892	6580	9/28/12	9/10/17	Complete Genome	LNCC	SAMN02603523	GCA_000300095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/095/GCA_000300095.1_ASM30009v1	23144415	BR3459a
Thermoanaerobacter thermocopriae JCM 7501	1291048	PRJNA204115	204115	Terrabacteria group	Firmicutes	2.45574	34.2	-	JADV01	54	2525	2298	1/10/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02584976	GCA_000518565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/565/GCA_000518565.1_ASM51856v1	-	ATCC 51646
Herbaspirillum seropedicae	964	PRJNA278769	278769	Proteobacteria	Betaproteobacteria	5.41867	63.1	chromosome:NZ_CP013136.1/CP013136.1	-	1	4795	4654	9/8/16	4/13/17	Complete Genome	INCT of Biological Nitrogen Fixation	SAMN03431268	GCA_001721865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/865/GCA_001721865.1_ASM172186v1	-	AU14040
Mesoplasma chauliocola ATCC 49578	1336232	PRJNA204049	204049	Terrabacteria group	Tenericutes	0.843889	26.9	-	JAEI01	18	768	714	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02584961	GCA_000518825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/825/GCA_000518825.1_ASM51882v1	-	ATCC 49578
Shewanella waksmanii ATCC BAA-643	1336233	PRJNA204050	204050	Proteobacteria	Gammaproteobacteria	4.97148	45.3	-	JAEH01	82	4495	4204	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02584962	GCA_000518805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/805/GCA_000518805.1_ASM51880v1	-	ATCC BAA-643
Atopobacter phocae ATCC BAA-285	1336234	PRJNA204052	204052	Terrabacteria group	Firmicutes	1.66639	34.6	-	JAGN01	82	1626	1474	1/14/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02584963	GCA_000526675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/675/GCA_000526675.1_ASM52667v1	-	ATCC BAA-285
Rhizobium selenitireducens ATCC BAA-1503	1336235	PRJNA204053	204053	Proteobacteria	Alphaproteobacteria	4.97669	63.5	-	JAEG01	29	4762	4610	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02584964	GCA_000518785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/785/GCA_000518785.1_ASM51878v1	-	ATCC BAA-1503
Phaseolibacter flectens ATCC 12775	1336237	PRJNA204094	204094	Proteobacteria	Gammaproteobacteria	2.74643	44.4	-	JAEE01	25	2462	2337	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02584966	GCA_000518745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/745/GCA_000518745.1_ASM51874v1	26767091	ATCC 12775
Mesoplasma seiffertii ATCC 49495	1336238	PRJNA204095	204095	Terrabacteria group	Tenericutes	0.977957	30.2	-	JAED01	11	865	814	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02584967	GCA_000518725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/725/GCA_000518725.1_ASM51872v1	-	ATCC 49495
Shewanella colwelliana ATCC 39565	1336240	PRJNA204100	204100	Proteobacteria	Gammaproteobacteria	4.57562	45.4	-	JAEC01	58	4059	3860	1/10/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02584968	GCA_000518705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/705/GCA_000518705.1_ASM51870v1	-	ATCC 39565
Eubacterium xylanophilum ATCC 35991	1336241	PRJNA204102	204102	Terrabacteria group	Firmicutes	2.57925	39.9	-	JAEB01	42	2224	2116	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02584969	GCA_000518685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/685/GCA_000518685.1_ASM51868v1	-	ATCC 35991
Microvirga flocculans ATCC BAA-817	1336243	PRJNA204104	204104	Proteobacteria	Alphaproteobacteria	4.02978	64.3	-	JAEA01	30	3862	3745	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02584970	GCA_000518665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/665/GCA_000518665.1_ASM51866v1	-	ATCC BAA-817
Curvibacter gracilis ATCC BAA-807	1336244	PRJNA204106	204106	Proteobacteria	Betaproteobacteria	6.74824	66	-	JADZ01	73	6124	5944	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02584971	GCA_000518645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/645/GCA_000518645.1_ASM51864v1	-	ATCC BAA-807
Carnimonas nigrificans ATCC BAA-78	1336245	PRJNA204107	204107	Proteobacteria	Gammaproteobacteria	2.72612	56.2	-	JAGO01	18	2419	2331	1/14/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02584972	GCA_000526695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/695/GCA_000526695.1_ASM52669v1	-	ATCC BAA-78
Mitsuaria chitosanitabida NBRC 102408	1349774	PRJDB1359	231415	Proteobacteria	Betaproteobacteria	5.81941	69.9	-	BCYP01	56	5091	4939	3/11/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046720	GCA_001598255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/255/GCA_001598255.1_ASM159825v1	-	NBRC 102408
Shewanella fidelis ATCC BAA-318	1336247	PRJNA204111	204111	Proteobacteria	Gammaproteobacteria	4.79869	42.8	-	JADX01	27	4203	4074	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02584974	GCA_000518605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/605/GCA_000518605.1_ASM51860v1	-	ATCC BAA-318
Aquitalea magnusonii	332411	PRJNA277276	277276	Proteobacteria	Betaproteobacteria	4.71071	58.9	-	JZRC01	118	4392	4265	3/27/15	4/10/17	Contig	University of Malaya	SAMN03389087	GCA_000964065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/065/GCA_000964065.1_ASM96406v1	-	SM6
Rhizobium larrymoorei ATCC 51759	1336249	PRJNA204114	204114	Proteobacteria	Alphaproteobacteria	5.16333	57.2	-	JADW01	74	4950	4723	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02584975	GCA_000518585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/585/GCA_000518585.1_ASM51858v1	-	ATCC 51759
Hallella seregens ATCC 51272	1336250	PRJNA204116	204116	FCB group	Bacteroidetes/Chlorobi group	3.26675	56	-	JADU01	58	2610	2453	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02584977	GCA_000518545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/545/GCA_000518545.1_ASM51854v1	-	ATCC 51272
Actinomyces timonensis DSM 23838	521393	PRJNA164799	164799	Terrabacteria group	Actinobacteria	2.93294	71	-	AKGF01	4	2529	2379	9/6/12	4/10/17	Scaffold	URMITE	SAMN02472053	GCA_000295095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/095/GCA_000295095.1_ASM29509v1	23144376	7400942
Listeria fleischmannii 1991	1430899	PRJNA230018	230018	Terrabacteria group	Firmicutes	2.79274	38.4	-	AZHO01	17	2727	2670	7/9/15	3/1/17	Scaffold	University of Milan	SAMN02418977	GCA_001050295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/295/GCA_001050295.1_ASM105029v1	26185097	1991
Mycoplasma salivarium ATCC 23064	1266997	PRJNA183034	183034	Terrabacteria group	Tenericutes	0.713526	26.4	-	AXZE01	17	642	587	10/25/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441084	GCA_000485555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/555/GCA_000485555.1_ASM48555v1	-	ATCC 23064
Paracoccus zeaxanthinifaciens ATCC 21588	1266998	PRJNA183038	183038	Proteobacteria	Alphaproteobacteria	3.04969	67.2	-	ATUJ01	35	2979	2856	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441598	GCA_000420145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/145/GCA_000420145.1_ASM42014v1	-	ATCC 21588
Lactobacillus parabrevis ATCC 53295	1267003	PRJNA183044	183044	Terrabacteria group	Firmicutes	2.63112	49	-	ARTH01	94	2499	2320	4/26/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441638	GCA_000383435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/435/GCA_000383435.1_ASM38343v1	-	RODS-DW
Brachyspira innocens ATCC 29796	1267004	PRJNA183045	183045	Spirochaetes	Spirochaetia	3.28161	27.7	-	ARQI01	130	2937	2767	4/26/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440503	GCA_000384655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/655/GCA_000384655.1_ASM38465v1	-	B256
Lactobacillus otakiensis DSM 19908 = JCM 15040	1423780	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.34619	42.4	-	AZED01	21	2297	2219	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369465	GCA_001434145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/145/GCA_001434145.1_ASM143414v1	26415554	DSM 19908
Pseudomonas chloritidismutans AW-1	1263865	PRJNA182713	182713	Proteobacteria	Gammaproteobacteria	5.05635	62.5	-	AOFQ01	77	4830	4528	11/7/13	4/17/17	Contig	Laboratory of Systems and Synthetic Biology	SAMN02472111	GCA_000495915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/915/GCA_000495915.1_PseChl	-	AW-1
Enhydrobacter sp. H5	1907940	PRJNA347875	347875	Proteobacteria	Alphaproteobacteria	2.73048	43.5	-	MLCM01	64	2458	2337	2/1/17	4/17/17	Contig	Kyonggi University	SAMN05898100	GCA_001982645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/645/GCA_001982645.1_ASM198264v1	-	H5
Hyphomicrobium zavarzinii ATCC 27496	1267005	PRJNA183046	183046	Proteobacteria	Alphaproteobacteria	4.65179	63.7	-	ARTG01	15	4275	4175	4/26/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440966	GCA_000383415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/415/GCA_000383415.1_ASM38341v1	-	ZV-622
Actinomyces slackii ATCC 49928	1278298	PRJNA185215	185215	Terrabacteria group	Actinobacteria	3.17109	70.1	-	AUAK01	46	2648	2479	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441219	GCA_000428685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/685/GCA_000428685.1_ASM42868v1	-	ATCC 49928
Acholeplasma multilocale ATCC 49900	1278299	PRJNA185218	185218	Terrabacteria group	Tenericutes	0.924993	30.6	-	AXXW01	11	867	815	10/25/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441097	GCA_000483165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/165/GCA_000483165.1_ASM48316v1	-	ATCC 49900
Mycoplasma moatsii ATCC 27625	1278300	PRJNA185219	185219	Terrabacteria group	Tenericutes	1.48069	26.5	-	ATUN01	42	-	-	7/9/13	12/12/13	Contig	DOE Joint Genome Institute	SAMN02441244	GCA_000420225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/225/GCA_000420225.1_ASM42022v1	-	ATCC 27625
Psychromonas hadalis ATCC BAA-638	1278302	PRJNA185221	185221	Proteobacteria	Gammaproteobacteria	3.97998	39.1	-	ATUO01	351	3706	3424	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440919	GCA_000420245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/245/GCA_000420245.1_ASM42024v1	-	ATCC BAA-638
Acholeplasma granularum ATCC 19168	1278304	PRJNA185223	185223	Terrabacteria group	Tenericutes	1.45354	29.4	-	JAFR01	14	1373	1314	1/14/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02584924	GCA_000526235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/235/GCA_000526235.1_ASM52623v1	-	ATCC 19168
Maledivibacter halophilus	36842	PRJEB19542	376321	Terrabacteria group	Firmicutes	5.80291	31.1	-	FUZT01	39	5389	5217	3/9/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02194393	GCA_900167445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/445/GCA_900167445.1_IMG-taxon_2524614863_annotated_assembly	-	M1
Fusobacterium russii ATCC 25533	1278306	PRJNA185225	185225	Fusobacteria	Fusobacteriia	1.9418	28.7	-	ARMK01	41	1798	1690	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441328	GCA_000381725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/725/GCA_000381725.1_ASM38172v1	-	593A
Psychromonas ossibalaenae ATCC BAA-1528	1278307	PRJNA185226	185226	Proteobacteria	Gammaproteobacteria	5.20431	42	-	ARML01	107	4556	4330	4/23/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441329	GCA_000381745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/745/GCA_000381745.1_ASM38174v1	-	JAMM 0738
Zimmermannella faecalis ATCC 13722	1278308	PRJNA185227	185227	Terrabacteria group	Actinobacteria	2.84735	68.5	-	ARMM01	17	2654	2559	4/23/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440490	GCA_000381765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/765/GCA_000381765.1_ASM38176v1	-	B187
Amphritea japonica ATCC BAA-1530	1278309	PRJNA185228	185228	Proteobacteria	Gammaproteobacteria	3.79953	47.5	-	ARMN01	22	3516	3434	4/23/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440491	GCA_000381785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/785/GCA_000381785.1_ASM38178v1	-	JAMM 1866
Acholeplasma axanthum ATCC 25176	1278311	PRJNA185235	185235	Terrabacteria group	Tenericutes	1.80712	28	-	AUAL01	57	1690	1574	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441544	GCA_000428705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/705/GCA_000428705.1_ASM42870v1	-	ATCC 25176
Psychromonas aquimarina ATCC BAA-1526	1278312	PRJNA185236	185236	Proteobacteria	Gammaproteobacteria	5.53463	42.5	-	AUAM01	141	4831	4624	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441204	GCA_000428725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/725/GCA_000428725.1_ASM42872v1	-	ATCC BAA-1526
Actinomadura atramentaria DSM 43919	1120936	PRJNA185238	185238	Terrabacteria group	Actinobacteria	6.71058	73.7	-	ARMS01	37	6288	6101	4/23/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441315	GCA_000381885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/885/GCA_000381885.1_ASM38188v1	-	SF2197
[Clostridium] sporosphaeroides DSM 1294	1121334	PRJNA185239	185239	Terrabacteria group	Firmicutes	3.17442	53.6	-	ARTA01	21	3071	2960	4/26/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441299	GCA_000383295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/295/GCA_000383295.1_ASM38329v1	-	VPI 4527
Gordonia kroppenstedtii DSM 45133	468556	PRJNA185240	185240	Terrabacteria group	Actinobacteria	4.22537	67.1	-	AQYG01	51	4009	3867	4/23/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441055	GCA_000380485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/485/GCA_000380485.1_ASM38048v1	-	NP8-5
Kaistia granuli DSM 23481	1122132	PRJNA185241	185241	Proteobacteria	Alphaproteobacteria	4.76611	65.9	-	AQYH01	20	4456	4366	4/23/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441386	GCA_000380505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/505/GCA_000380505.1_ASM38050v1	-	Ko04
Salinicoccus albus DSM 19776	1123230	PRJNA185242	185242	Terrabacteria group	Firmicutes	2.63935	43.9	-	ARQJ01	33	2686	2589	4/26/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441646	GCA_000385175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/175/GCA_000385175.1_ASM38517v1	-	YIM-Y21
Veillonella magna DSM 19857	1123489	PRJNA185243	185243	Terrabacteria group	Firmicutes	2.20331	44.6	-	AUAN01	34	2016	1906	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441545	GCA_000428745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/745/GCA_000428745.1_ASM42874v1	-	DSM 19857
Nitrosomonas cryotolerans ATCC 49181	1131553	PRJEB18452	356023	Proteobacteria	Betaproteobacteria	2.92819	43.5	-	FSRO01	2	2616	2448	12/14/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02743940	GCA_900143275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/275/GCA_900143275.1_IMG-taxon_2588253501_annotated_assembly	-	ATCC 49181
Eubacterium hallii CAG:12	1263078	PRJEB700	206577	Terrabacteria group	Firmicutes	2.72218	38.4	-	CBDD01	201	2338	2309	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138680	GCA_000435875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/875/GCA_000435875.1_MGS12	-	-
Bacteroides stercoris CAG:120	1263053	PRJEB701	206578	FCB group	Bacteroidetes/Chlorobi group	3.1828	46.4	-	CBBX01	118	2630	2593	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138637	GCA_000435015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/015/GCA_000435015.1_MGS120	-	-
Firmicutes bacterium CAG:170	1263006	PRJEB739	206584	Terrabacteria group	Firmicutes	2.46017	58.6	-	CBEH01	191	2265	2234	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138721	GCA_000436735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/735/GCA_000436735.1_MGS170	-	-
Firmicutes bacterium CAG:124	1263002	PRJEB704	206586	Terrabacteria group	Firmicutes	2.53891	58.4	-	CAYD01	145	2397	2364	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138494	GCA_000432135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/135/GCA_000432135.1_MGS124	-	-
Ruminococcus gnavus CAG:126	1263106	PRJEB705	206587	Terrabacteria group	Firmicutes	2.727	43.3	-	CBAL01	66	2615	2589	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138565	GCA_000433555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/555/GCA_000433555.1_MGS126	-	-
Firmicutes bacterium CAG:176	1263007	PRJEB740	206589	Terrabacteria group	Firmicutes	1.5914	61.2	-	CBCO01	134	1535	1506	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138664	GCA_000435555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/555/GCA_000435555.1_MGS176	-	-
Roseburia sp. 831b	1261635	PRJNA341691	341691	Terrabacteria group	Firmicutes	3.39099	40.7	-	MJHW01	23	3131	2959	1/9/17	4/16/17	Contig	USDA-ARS	SAMN05726915	GCA_001940165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/165/GCA_001940165.1_ASM194016v1	27613689	831b
Firmicutes bacterium CAG:129	1263003	PRJEB707	206594	Terrabacteria group	Firmicutes	1.76213	61.1	-	CBAB01	204	1658	1635	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138547	GCA_000433195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/195/GCA_000433195.1_MGS129	-	-
Roseburia intestinalis CAG:13	1263104	PRJEB708	206595	Terrabacteria group	Firmicutes	3.29576	42.9	-	CBCC01	105	2887	2856	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138643	GCA_000435135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/135/GCA_000435135.1_MGS13	-	-
Clostridium clostridioforme CAG:132	1263065	PRJEB710	206597	Terrabacteria group	Firmicutes	4.49388	49.7	-	CBDY01	276	4200	4153	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138707	GCA_000436455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/455/GCA_000436455.1_MGS132	-	-
Methanobrevibacter smithii CAG:186	1263088	PRJEB746	206601	Euryarchaeota	Methanobacteria	1.72997	31.2	-	CBKP01	30	1740	1706	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138737	GCA_000437055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/055/GCA_000437055.1_MGS186	-	-
Bacteroides finegoldii CAG:203	1263045	PRJEB756	206603	FCB group	Bacteroidetes/Chlorobi group	3.53086	42.4	-	CBFL01	127	2852	2825	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138727	GCA_000436855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/855/GCA_000436855.1_MGS203	-	-
Clostridium bartlettii CAG:1329	1263063	PRJEB712	206608	Terrabacteria group	Firmicutes	2.96127	28.5	-	CBBD01	31	2697	2686	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138579	GCA_000433835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/835/GCA_000433835.1_MGS1329	-	-
Sutterella wadsworthensis CAG:135	1263111	PRJEB713	206609	Proteobacteria	Betaproteobacteria	2.77712	55.2	-	CAZN01	298	2461	2410	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138518	GCA_000432615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/615/GCA_000432615.1_MGS135	-	-
Firmicutes bacterium CAG:137	1263004	PRJEB714	206610	Terrabacteria group	Firmicutes	2.7525	56.8	-	CBDK01	269	2384	2347	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138686	GCA_000435995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/995/GCA_000435995.1_MGS137	-	-
Coprococcus comes CAG:19	1263070	PRJEB748	206611	Terrabacteria group	Firmicutes	2.44831	42.9	-	CBEG01	111	2233	2198	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138720	GCA_000436715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/715/GCA_000436715.1_MGS19	-	-
Firmicutes bacterium CAG:194	1263008	PRJEB750	206613	Terrabacteria group	Firmicutes	2.59141	44.2	-	CAZT01	64	2337	2311	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138533	GCA_000432915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/915/GCA_000432915.1_MGS194	-	-
Bacteroides caccae CAG:21	1263037	PRJEB759	206615	FCB group	Bacteroidetes/Chlorobi group	4.50601	42.1	-	CBAN01	106	3573	3543	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138566	GCA_000433575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/575/GCA_000433575.1_MGS21	-	-
Bacteroides plebeius CAG:211	1263052	PRJEB760	206617	FCB group	Bacteroidetes/Chlorobi group	3.2765	45.1	-	CBAT01	177	2691	2643	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138573	GCA_000433715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/715/GCA_000433715.1_MGS211	-	-
Firmicutes bacterium CAG:212	1263009	PRJEB761	206618	Terrabacteria group	Firmicutes	2.36356	38	-	CBBF01	138	2104	2078	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138591	GCA_000434075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/075/GCA_000434075.1_MGS212	-	-
Lachnospiraceae bacterium CAG:215	1262985	PRJEB762	206619	Terrabacteria group	Firmicutes	2.76926	45.9	-	CBCV01	188	2508	2481	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138671	GCA_000435695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/695/GCA_000435695.1_MGS215	-	-
Firmicutes bacterium CAG:102	1262998	PRJEB677	206621	Terrabacteria group	Firmicutes	2.09004	47.8	-	CAWG01	50	2065	2022	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138705	GCA_000436415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/415/GCA_000436415.1_MGS102	-	MGS:102
Firmicutes bacterium CAG:103	1262999	PRJEB679	206623	Terrabacteria group	Firmicutes	1.8789	62.3	-	CAWL01	134	1842	1809	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138506	GCA_000432375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/375/GCA_000432375.1_MGS103	-	-
Proteobacteria bacterium CAG:139	1262986	PRJEB716	206626	Proteobacteria	environmental samples	2.04503	49.3	-	CBBV01	145	1926	1880	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138628	GCA_000434815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/815/GCA_000434815.1_MGS139	-	-
Odoribacter splanchnicus CAG:14	1263090	PRJEB717	206627	FCB group	Bacteroidetes/Chlorobi group	3.96289	43.5	-	CBCZ01	209	3265	3226	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138673	GCA_000435735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/735/GCA_000435735.1_MGS14	-	-
Dialister invisus CAG:218	1263072	PRJEB764	206630	Terrabacteria group	Firmicutes	1.77358	45.3	-	CBAF01	45	1733	1693	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138551	GCA_000433275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/275/GCA_000433275.1_MGS218	-	-
Bacteroides ovatus CAG:22	1263050	PRJEB765	206631	FCB group	Bacteroidetes/Chlorobi group	5.34292	42	-	CBDX01	257	4100	4063	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138706	GCA_000436435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/435/GCA_000436435.1_MGS22	-	-
Corallococcus sp. CAG:1435	1262867	PRJEB719	206634	Proteobacteria	delta/epsilon subdivisions	1.56435	45.8	-	CBAX01	57	1343	1300	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138576	GCA_000433775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/775/GCA_000433775.1_MGS1435	-	-
Firmicutes bacterium CAG:145	1263005	PRJEB721	206636	Terrabacteria group	Firmicutes	2.06605	45.3	-	CBCX01	31	1995	1960	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138672	GCA_000435715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/715/GCA_000435715.1_MGS145	-	-
Bacteroides dorei CAG:222	1263042	PRJEB767	206642	FCB group	Bacteroidetes/Chlorobi group	3.7496	41.8	-	CBDO01	140	3005	2976	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138692	GCA_000436135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/135/GCA_000436135.1_MGS222	-	-
Clostridium hathewayi CAG:224	1263067	PRJEB768	206643	Terrabacteria group	Firmicutes	5.58708	48.7	-	CBAI01	147	4794	4753	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138557	GCA_000433395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/395/GCA_000433395.1_MGS224	-	-
Blautia hydrogenotrophica CAG:147	1263061	PRJEB723	206644	Terrabacteria group	Firmicutes	3.35903	45.1	-	CAWR01	59	3120	3087	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138442	GCA_000431095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/095/GCA_000431095.1_MGS147	-	-
Roseburia inulinivorans CAG:15	1263105	PRJEB725	206646	Terrabacteria group	Firmicutes	2.95905	41.6	-	CAXY01	180	2686	2653	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138489	GCA_000432035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/035/GCA_000432035.1_MGS15	-	-
Akkermansia muciniphila CAG:154	1263034	PRJEB726	206650	PVC group	Verrucomicrobia	2.72183	55.4	-	CBDW01	81	2422	2376	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138704	GCA_000436395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/395/GCA_000436395.1_MGS154	-	-
Firmicutes bacterium CAG:227	1263010	PRJEB770	206652	Terrabacteria group	Firmicutes	2.69151	38.4	-	CBGC01	137	2310	2286	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138731	GCA_000436935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/935/GCA_000436935.1_MGS227	-	-
Pandoraea norimbergensis	93219	PRJNA305058	305058	Proteobacteria	Betaproteobacteria	6.16737	63.1	chromosome:NZ_CP013480.3/CP013480.3	-	1	5439	5293	12/14/15	4/17/17	Complete Genome	University of Malaya	SAMN04316854	GCA_001465545.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/465/545/GCA_001465545.3_ASM146554v3	-	DSM 11628
Parasutterella excrementihominis CAG:233	1263099	PRJEB772	206659	Proteobacteria	Betaproteobacteria	2.50174	48.3	-	CAXE01	121	2277	2228	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138460	GCA_000431455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/455/GCA_000431455.1_MGS233	-	-
Bifidobacterium bifidum CAG:234	1263058	PRJEB773	206660	Terrabacteria group	Actinobacteria	2.12414	62.6	-	CBDF01	107	1831	1784	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138682	GCA_000435915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/915/GCA_000435915.1_MGS234	-	-
Bacteroides cellulosilyticus CAG:158	1263038	PRJEB730	206662	FCB group	Bacteroidetes/Chlorobi group	5.91864	43	-	CBEB01	228	4401	4369	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138712	GCA_000436555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/555/GCA_000436555.1_MGS158	-	-
Streptococcus thermophilus CAG:236	1263110	PRJEB775	206664	Terrabacteria group	Firmicutes	1.63196	39	-	CBBT01	66	1750	1735	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138625	GCA_000434755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/755/GCA_000434755.1_MGS236	-	-
Bacteroides eggerthii CAG:109	1263043	PRJEB688	206666	FCB group	Bacteroidetes/Chlorobi group	3.56092	44.5	-	CAYK01	92	2861	2827	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138710	GCA_000436515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/515/GCA_000436515.1_MGS109	-	-
Bacteroides clarus CAG:160	1263039	PRJEB731	206668	FCB group	Bacteroidetes/Chlorobi group	3.65461	45.6	-	CBEF01	96	3042	3005	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138717	GCA_000436655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/655/GCA_000436655.1_MGS160	-	-
Firmicutes bacterium CAG:238	1263011	PRJEB777	206670	Terrabacteria group	Firmicutes	2.11826	45.6	-	CBCS01	125	2033	2017	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138667	GCA_000435615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/615/GCA_000435615.1_MGS238	-	-
Firmicutes bacterium CAG:24	1263012	PRJEB779	206672	Terrabacteria group	Firmicutes	2.83098	48.5	-	CAXU01	152	2554	2518	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138481	GCA_000431875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/875/GCA_000431875.1_MGS24	-	-
Firmicutes bacterium CAG:240	1263013	PRJEB780	206673	Terrabacteria group	Firmicutes	1.97356	53.5	-	CBDR01	180	1951	1917	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138699	GCA_000436275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/275/GCA_000436275.1_MGS240	-	-
Paraprevotella clara CAG:116	1263095	PRJEB695	206677	FCB group	Bacteroidetes/Chlorobi group	3.65222	48.6	-	CAZH01	69	2889	2847	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138729	GCA_000436895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/895/GCA_000436895.1_MGS116	-	-
Bacteroides coprocola CAG:162	1263040	PRJEB733	206679	FCB group	Bacteroidetes/Chlorobi group	3.14203	40.8	-	CBCJ01	183	2511	2478	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138652	GCA_000435315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/315/GCA_000435315.1_MGS162	-	-
Parabacteroides johnsonii CAG:246	1263091	PRJEB784	206680	FCB group	Bacteroidetes/Chlorobi group	3.64209	45.4	-	CAXA01	240	2978	2941	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138450	GCA_000431255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/255/GCA_000431255.1_MGS246	-	-
Prevotella copri CAG:164	1263102	PRJEB734	206683	FCB group	Bacteroidetes/Chlorobi group	2.83666	45.8	-	CBCH01	214	2384	2331	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138649	GCA_000435255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/255/GCA_000435255.1_MGS164	-	-
Lachnospiraceae bacterium CAG:25	1262984	PRJEB786	206685	Terrabacteria group	Firmicutes	2.39699	37.3	-	CBBP01	154	2246	2223	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138606	GCA_000434375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/375/GCA_000434375.1_MGS25	-	-
Bifidobacterium adolescentis CAG:119	1263057	PRJEB698	206687	Terrabacteria group	Actinobacteria	1.92435	59.4	-	CAXT01	124	1643	1593	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138648	GCA_000435235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/235/GCA_000435235.1_MGS119	-	-
Firmicutes bacterium CAG:94	1262989	PRJEB1039	206693	Terrabacteria group	Firmicutes	2.55062	60.4	-	CBGU01	264	2448	2413	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138656	GCA_000435395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/395/GCA_000435395.1_MGS94	-	-
Dialister sp. CAG:486	1262870	PRJEB902	206913	Terrabacteria group	Firmicutes	2.19341	52	-	CBBY01	181	1969	1927	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138611	GCA_000434475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/475/GCA_000434475.1_MGS486	-	-
Eubacterium rectale CAG:36	1263079	PRJEB850	206696	Terrabacteria group	Firmicutes	2.75285	41.8	-	CBFV01	82	2563	2529	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138499	GCA_000432235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/235/GCA_000432235.1_MGS36	-	-
Lachnospiraceae bacterium CAG:364	1262983	PRJEB851	206697	Terrabacteria group	Firmicutes	2.44465	38.8	-	CBER01	93	2306	2282	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138461	GCA_000431475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/475/GCA_000431475.1_MGS364	-	-
Clostridium clostridioforme CAG:511	1263066	PRJEB912	206698	Terrabacteria group	Firmicutes	3.94365	49.4	-	CBKN01	110	3788	3751	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138795	GCA_000438215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/215/GCA_000438215.1_MGS511	-	-
Alistipes putredinis CAG:67	1263036	PRJEB976	206702	FCB group	Bacteroidetes/Chlorobi group	2.15521	54.4	-	CBJI01	50	1953	1913	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138702	GCA_000436355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/355/GCA_000436355.1_MGS67	-	-
Alistipes finegoldii CAG:68	1263035	PRJEB978	206704	FCB group	Bacteroidetes/Chlorobi group	2.86299	58.6	-	CBAO01	145	2423	2386	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138523	GCA_000432715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/715/GCA_000432715.1_MGS68	-	-
Bifidobacterium longum CAG:69	1263059	PRJEB979	206705	Terrabacteria group	Actinobacteria	2.03511	60.1	-	CAZE01	117	1737	1686	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138475	GCA_000431755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/755/GCA_000431755.1_MGS69	-	-
Firmicutes bacterium CAG:95	1262988	PRJEB1040	206706	Terrabacteria group	Firmicutes	3.08932	43.7	-	CBKF01	156	2791	2767	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138792	GCA_000438155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/155/GCA_000438155.1_MGS95	-	-
Lactobacillus ruminis CAG:367	1263085	PRJEB852	206710	Terrabacteria group	Firmicutes	1.95396	43.8	-	CBFO01	141	1807	1788	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138490	GCA_000432055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/055/GCA_000432055.1_MGS367	-	-
Eubacterium dolichum CAG:375	1263076	PRJEB855	206713	Terrabacteria group	Firmicutes	2.0251	37.4	-	CBIN01	117	1952	1927	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138765	GCA_000437615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/615/GCA_000437615.1_MGS375	-	-
Sutterella sp. KLE1602	1574262	PRJNA268322	268322	Proteobacteria	Betaproteobacteria	2.57649	62	-	LTDB01	112	2292	2156	3/2/16	4/12/17	Scaffold	The Genome Institute at Washington University	SAMN03956216	GCA_001578585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/585/GCA_001578585.1_ASM157858v1	-	KLE1602
Corynebacterium testudinoris	136857	PRJNA280910	280910	Terrabacteria group	Actinobacteria	2.72123	63.1	chromosome:NZ_CP011545.1/CP011545.1	-	1	2608	2496	6/5/15	4/17/17	Complete Genome	Bielefeld University	SAMN03480629	GCA_001021045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/045/GCA_001021045.1_ASM102104v1	26227591	DSM 44614
Flavobacterium cauense R2A-7	1341154	PRJNA206417	206417	FCB group	Bacteroidetes/Chlorobi group	3.11396	38.2	-	AVBI01	39	2920	2851	11/22/13	4/9/17	Contig	Seoul National University	SAMN02470903	GCA_000498475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/475/GCA_000498475.1_Fcau1.0	-	R2A-7
Clostridium paraputrificum AGR2156	1280689	PRJNA185687	185687	Terrabacteria group	Firmicutes	3.56129	29.7	-	AUJC01	30	3484	3363	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440830	GCA_000424025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/025/GCA_000424025.1_ASM42402v1	-	AGR2156
Methylocella silvestris BL2	395965	PRJNA20635	20635	Proteobacteria	Alphaproteobacteria	4.30543	63.1	chromosome:NC_011666.1/CP001280.1	-	1	4011	3873	12/15/08	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000045	GCA_000021745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/745/GCA_000021745.1_ASM2174v1	20472789	BL2
Laceyella sacchari 1-1	1341151	PRJNA204959	204959	Terrabacteria group	Firmicutes	3.32432	48.9	-	ASZU01	42	-	-	7/9/13	7/9/13	Contig	CSIR-IMTECH	SAMN02204340	GCA_000421885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/885/GCA_000421885.1_Laceyella_sacchari_strain_1-1	-	-
Flavobacterium enshiense DK69	1107311	PRJNA206418	206418	FCB group	Bacteroidetes/Chlorobi group	3.38709	37.7	-	AVCS01	48	3044	2963	11/22/13	4/9/17	Contig	Seoul National University	SAMN02470902	GCA_000498495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/495/GCA_000498495.1_Fens1.0	-	DK69
Brachyspira sp. G79	1358104	PRJNA259517	259517	Spirochaetes	Spirochaetia	3.2854	26.1	-	JQIU01	14	2664	2444	9/27/17	9/27/17	Scaffold	University of Saskatchewan	SAMN03008925	GCA_002379365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/365/GCA_002379365.1_ASM237936v1	-	G79
Ruminococcus obeum CAG:39	1263107	PRJEB863	206748	Terrabacteria group	Firmicutes	2.60795	42	-	CBHW01	195	2369	2346	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138734	GCA_000436995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/995/GCA_000436995.1_MGS39	-	-
Firmicutes bacterium CAG:536	1263028	PRJEB924	206750	Terrabacteria group	Firmicutes	1.6577	37.3	-	CBBQ01	69	1650	1621	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138605	GCA_000434355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/355/GCA_000434355.1_MGS536	-	-
Lactobacillus amylovorus CAG:719	1263084	PRJEB988	206754	Terrabacteria group	Firmicutes	1.81665	38.1	-	CBBM01	55	1855	1824	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138807	GCA_000442765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/765/GCA_000442765.1_MGS719	-	-
Eubacterium eligens CAG:72	1263077	PRJEB989	206755	Terrabacteria group	Firmicutes	2.58543	37.5	-	CBBU01	112	2403	2383	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138608	GCA_000434415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/415/GCA_000434415.1_MGS72	-	-
Clostridium leptum CAG:27	1263068	PRJEB802	206760	Terrabacteria group	Firmicutes	2.81896	50.2	-	CBEP01	71	2522	2482	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138485	GCA_000431955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/955/GCA_000431955.1_MGS27	-	-
Firmicutes bacterium CAG:270	1263014	PRJEB803	206761	Terrabacteria group	Firmicutes	1.77663	36.5	-	CBHP01	140	1710	1695	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138675	GCA_000435775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/775/GCA_000435775.1_MGS270	-	-
Firmicutes bacterium CAG:552	1263029	PRJEB928	206766	Terrabacteria group	Firmicutes	1.35693	43	-	CBDH01	52	1211	1175	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138661	GCA_000435495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/495/GCA_000435495.1_MGS552	-	-
Firmicutes bacterium CAG:555	1263030	PRJEB929	206767	Terrabacteria group	Firmicutes	1.77644	53.1	-	CAWW01	53	1754	1723	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138441	GCA_000431075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/075/GCA_000431075.1_MGS555	-	-
Bacteroides fragilis CAG:558	1263047	PRJEB931	206769	FCB group	Bacteroidetes/Chlorobi group	4.62604	43.4	-	CAZX01	175	3762	3729	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138512	GCA_000432495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/495/GCA_000432495.1_MGS558	-	-
Firmicutes bacterium CAG:272	1263015	PRJEB804	206774	Terrabacteria group	Firmicutes	2.51115	52.1	-	CBFW01	193	2285	2249	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138563	GCA_000433515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/515/GCA_000433515.1_MGS272	-	-
Bacteroides thetaiotaomicron CAG:40	1263054	PRJEB868	206778	FCB group	Bacteroidetes/Chlorobi group	5.38445	42.9	-	CBJO01	142	4099	4067	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138784	GCA_000437995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/995/GCA_000437995.1_MGS40	-	-
Firmicutes bacterium CAG:41	1263021	PRJEB871	206781	Terrabacteria group	Firmicutes	2.75755	38.1	-	CBEM01	154	2489	2447	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138468	GCA_000431615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/615/GCA_000431615.1_MGS41	-	-
Firmicutes bacterium CAG:56	1263031	PRJEB932	206782	Terrabacteria group	Firmicutes	2.5825	44.6	-	CBCG01	264	2181	2160	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138616	GCA_000434575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/575/GCA_000434575.1_MGS56	-	-
Odoribacter laneus CAG:561	1263089	PRJEB933	206783	FCB group	Bacteroidetes/Chlorobi group	3.47768	40.7	-	CBAQ01	46	2854	2812	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138534	GCA_000432935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/935/GCA_000432935.1_MGS561	-	-
Bacteroides intestinalis CAG:564	1263049	PRJEB935	206785	FCB group	Bacteroidetes/Chlorobi group	3.82009	42.6	-	CAYY01	251	2848	2827	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138473	GCA_000431715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/715/GCA_000431715.1_MGS564	-	-
Dorea formicigenerans CAG:28	1263073	PRJEB810	206792	Terrabacteria group	Firmicutes	2.65452	41	-	CBFN01	123	2485	2461	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138519	GCA_000432635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/635/GCA_000432635.1_MGS28	-	-
Dorea longicatena CAG:42	1263074	PRJEB875	206797	Terrabacteria group	Firmicutes	2.40409	41.9	-	CBIK01	141	2229	2196	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138744	GCA_000437195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/195/GCA_000437195.1_MGS42	-	-
Megasphaera elsdenii CAG:570	1263087	PRJEB939	206801	Terrabacteria group	Firmicutes	2.17805	52.9	-	CBKE01	183	2081	2033	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138781	GCA_000437935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/935/GCA_000437935.1_MGS570	-	-
Succinatimonas sp. CAG:777	1262974	PRJEB1003	206806	Proteobacteria	Gammaproteobacteria	2.25417	36.8	-	CAXH01	71	2009	1970	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138479	GCA_000431835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/835/GCA_000431835.1_MGS777	-	-
Firmicutes bacterium CAG:313	1263017	PRJEB826	206859	Terrabacteria group	Firmicutes	1.48938	29.4	-	CBGQ01	41	1349	1321	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138587	GCA_000433995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/995/GCA_000433995.1_MGS313	-	-
Firmicutes bacterium CAG:460	1263024	PRJEB889	206862	Terrabacteria group	Firmicutes	1.10247	26.3	-	CBJC01	34	1195	1169	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138752	GCA_000437355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/355/GCA_000437355.1_MGS460	-	-
Bacteroides vulgatus CAG:6	1263056	PRJEB952	206865	FCB group	Bacteroidetes/Chlorobi group	3.83966	42.3	-	CBKK01	147	3060	3022	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138786	GCA_000438035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/035/GCA_000438035.1_MGS6	-	-
Firmicutes bacterium CAG:822	1263032	PRJEB1017	206870	Terrabacteria group	Firmicutes	1.34441	29.1	-	CAYG01	45	1414	1377	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138530	GCA_000432855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/855/GCA_000432855.1_MGS822	-	-
Firmicutes bacterium CAG:83	1262992	PRJEB1019	206872	Terrabacteria group	Firmicutes	1.86694	60.7	-	CAWX01	152	1749	1718	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138466	GCA_000431575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/575/GCA_000431575.1_MGS83	-	-
Bacteroides intestinalis CAG:315	1263048	PRJEB828	206873	FCB group	Bacteroidetes/Chlorobi group	4.77659	42.4	-	CBHY01	245	3540	3513	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138741	GCA_000437135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/135/GCA_000437135.1_MGS315	-	-
Bacteroides faecis CAG:32	1263044	PRJEB831	206876	FCB group	Bacteroidetes/Chlorobi group	4.76871	42.5	-	CBGB01	220	3663	3635	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138556	GCA_000433375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/375/GCA_000433375.1_MGS32	-	-
Firmicutes bacterium CAG:466	1263025	PRJEB892	206877	Terrabacteria group	Firmicutes	2.69553	44.7	-	CBFA01	105	2720	2676	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138531	GCA_000432875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/875/GCA_000432875.1_MGS466	-	-
Bacteroides fragilis CAG:47	1263046	PRJEB893	206878	FCB group	Bacteroidetes/Chlorobi group	4.45757	43.6	-	CBHA01	118	3631	3593	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138592	GCA_000434095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/095/GCA_000434095.1_MGS47	-	-
Ruminococcus torques CAG:61	1263108	PRJEB958	206883	Terrabacteria group	Firmicutes	2.36351	41.9	-	CAZS01	94	2048	2019	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138493	GCA_000432115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/115/GCA_000432115.1_MGS61	-	-
Firmicutes bacterium CAG:321	1263018	PRJEB832	206889	Terrabacteria group	Firmicutes	1.21483	26.1	-	CBIW01	87	1251	1220	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138769	GCA_000437695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/695/GCA_000437695.1_MGS321	-	-
Acidaminococcus intestini CAG:325	1263033	PRJEB834	206893	Terrabacteria group	Firmicutes	2.16158	50.1	-	CBEK01	81	2091	2046	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138452	GCA_000431295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/295/GCA_000431295.1_MGS325	-	-
Firmicutes bacterium CAG:475	1263026	PRJEB898	206897	Terrabacteria group	Firmicutes	1.49586	46.8	-	CBHN01	139	1310	1270	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138609	GCA_000434435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/435/GCA_000434435.1_MGS475	-	-
Parabacteroides merdae CAG:48	1263094	PRJEB899	206898	FCB group	Bacteroidetes/Chlorobi group	3.61618	45.6	-	CBGM01	246	3009	2964	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138585	GCA_000433955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/955/GCA_000433955.1_MGS48	-	-
Peptostreptococcus anaerobius CAG:621	1263100	PRJEB962	206901	Terrabacteria group	Firmicutes	1.90098	36	-	CAYH01	90	1718	1713	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138458	GCA_000431415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/415/GCA_000431415.1_MGS621	-	-
Acholeplasma sp. CAG:878	1262686	PRJEB1026	206905	Terrabacteria group	Tenericutes	1.12306	25.9	-	CAXX01	44	1181	1145	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138500	GCA_000432255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/255/GCA_000432255.1_MGS878	-	-
Firmicutes bacterium CAG:882	1262991	PRJEB1027	206906	Terrabacteria group	Firmicutes	2.91581	43.6	-	CBHL01	116	2598	2572	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138666	GCA_000435595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/595/GCA_000435595.1_MGS882	-	-
Bacteroides coprophilus CAG:333	1263041	PRJEB836	206907	FCB group	Bacteroidetes/Chlorobi group	2.88817	46.3	-	CBFM01	127	2399	2352	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138492	GCA_000432095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/095/GCA_000432095.1_MGS333	-	-
Cryptobacterium sp. CAG:338	1262868	PRJEB837	206908	Terrabacteria group	Actinobacteria	1.93129	45	-	CBHR01	61	1681	1643	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138660	GCA_000435475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/475/GCA_000435475.1_MGS338	-	-
Firmicutes bacterium CAG:341	1263019	PRJEB838	206909	Terrabacteria group	Firmicutes	1.73717	36.6	-	CBHK01	52	1625	1596	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138636	GCA_000434995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/995/GCA_000434995.1_MGS341	-	-
Prevotella stercorea CAG:629	1263103	PRJEB965	206916	FCB group	Bacteroidetes/Chlorobi group	2.44814	49.9	-	CBIT01	207	2035	1995	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138761	GCA_000437535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/535/GCA_000437535.1_MGS629	-	-
Firmicutes bacterium CAG:631	1262996	PRJEB966	206917	Terrabacteria group	Firmicutes	1.45618	30.1	-	CBAS01	46	1387	1348	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138538	GCA_000433015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/015/GCA_000433015.1_MGS631	-	-
Firmicutes bacterium CAG:884	1262990	PRJEB1028	206919	Terrabacteria group	Firmicutes	1.20844	26.7	-	CAZD01	49	1259	1232	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138581	GCA_000433875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/875/GCA_000433875.1_MGS884	-	-
Firmicutes bacterium CAG:345	1263020	PRJEB841	206924	Terrabacteria group	Firmicutes	1.6342	29.5	-	CBGR01	35	1509	1462	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138553	GCA_000433315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/315/GCA_000433315.1_MGS345	-	-
Clostridium nexile CAG:348	1263069	PRJEB842	206925	Terrabacteria group	Firmicutes	2.52733	40.1	-	CBEY01	55	2348	2321	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138470	GCA_000431655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/655/GCA_000431655.1_MGS348	-	-
Proteobacteria bacterium CAG:495	1262987	PRJEB906	206929	Proteobacteria	environmental samples	1.70912	46.1	-	CAZU01	71	1732	1693	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138501	GCA_000432275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/275/GCA_000432275.1_MGS495	-	-
Klebsiella variicola CAG:634	1263083	PRJEB969	206932	Proteobacteria	Gammaproteobacteria	5.18216	57	-	CBBA01	266	4917	4879	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138570	GCA_000433655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/655/GCA_000433655.1_MGS634	-	-
Erysipelotrichaceae bacterium CAG:64	1262981	PRJEB970	206933	Terrabacteria group	Firmicutes	4.04551	43.9	-	CBGA01	105	3962	3917	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138684	GCA_000435955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/955/GCA_000435955.1_MGS64	-	-
Firmicutes bacterium CAG:646	1262995	PRJEB971	206934	Terrabacteria group	Firmicutes	2.88116	43.5	-	CAZW01	91	2702	2671	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138504	GCA_000432335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/335/GCA_000432335.1_MGS646	-	-
Firmicutes bacterium CAG:65	1262994	PRJEB973	206948	Terrabacteria group	Firmicutes	2.78589	46.6	-	CBCW01	173	2552	2513	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138634	GCA_000434955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/955/GCA_000434955.1_MGS65	-	-
Coprococcus eutactus CAG:665	1263071	PRJEB975	206950	Terrabacteria group	Firmicutes	2.79971	42.8	-	CBAW01	87	2444	2415	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138552	GCA_000433295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/295/GCA_000433295.1_MGS665	-	-
Butyrivibrio crossotus CAG:259	1263062	PRJEB793	206723	Terrabacteria group	Firmicutes	2.09032	37.6	-	CAYU01	71	2008	1976	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138507	GCA_000432395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/395/GCA_000432395.1_MGS259	-	-
Bifidobacterium pseudocatenulatum CAG:263	1263060	PRJEB795	206725	Terrabacteria group	Actinobacteria	2.00959	56.4	-	CBEV01	123	1705	1659	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138725	GCA_000436815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/815/GCA_000436815.1_MGS263	-	-
Megamonas funiformis CAG:377	1263086	PRJEB856	206726	Terrabacteria group	Firmicutes	2.00662	31.8	-	CBEL01	125	1912	1880	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138457	GCA_000431395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/395/GCA_000431395.1_MGS377	-	-
Firmicutes bacterium CAG:534	1263027	PRJEB923	206735	Terrabacteria group	Firmicutes	2.68237	45.7	-	CBHC01	76	2525	2499	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138691	GCA_000436115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/115/GCA_000436115.1_MGS534	-	-
Erythrobacter litoralis HTCC2594	314225	PRJNA13480	13480	Proteobacteria	Alphaproteobacteria	3.0524	63.1	chromosome:NC_007722.1/CP000157.1	-	1	2975	2887	1/11/06	4/6/17	Complete Genome	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN00622970	GCA_000013005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/005/GCA_000013005.1_ASM1300v1	-	HTCC2594
Bacteroides uniformis CAG:3	1263055	PRJEB818	206825	FCB group	Bacteroidetes/Chlorobi group	4.27033	46.4	-	CBIC01	72	3621	3570	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138749	GCA_000437295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/295/GCA_000437295.1_MGS3	-	-
Bacteroides pectinophilus CAG:437	1263051	PRJEB880	206827	FCB group	Bacteroidetes/Chlorobi group	2.53473	42	-	CBHH01	37	2311	2278	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138595	GCA_000434155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/155/GCA_000434155.1_MGS437	-	-
Firmicutes bacterium CAG:582	1262997	PRJEB945	206832	Terrabacteria group	Firmicutes	1.28811	27.1	-	CBDJ01	40	1321	1293	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138662	GCA_000435515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/515/GCA_000435515.1_MGS582	-	-
Clostridium bolteae CAG:59	1263064	PRJEB947	206834	Terrabacteria group	Firmicutes	5.41456	49.6	-	CAXJ01	179	4903	4862	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138446	GCA_000431175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/175/GCA_000431175.1_MGS59	-	-
Streptococcus salivarius CAG:79	1263109	PRJEB1008	206835	Terrabacteria group	Firmicutes	1.88958	40.2	-	CBKD01	150	1686	1668	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138791	GCA_000438135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/135/GCA_000438135.1_MGS79	-	-
Firmicutes bacterium CAG:791	1262993	PRJEB1009	206836	Terrabacteria group	Firmicutes	2.43531	51.2	-	CAWT01	87	2210	2175	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138462	GCA_000431495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/495/GCA_000431495.1_MGS791	-	-
Firmicutes bacterium CAG:308	1263016	PRJEB823	206842	Terrabacteria group	Firmicutes	1.72	34.8	-	CBHE01	57	1772	1735	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138623	GCA_000434715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/715/GCA_000434715.1_MGS308	-	-
Firmicutes bacterium CAG:449	1263023	PRJEB885	206844	Terrabacteria group	Firmicutes	1.96827	26	-	CBFH01	144	1800	1771	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138532	GCA_000432895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/895/GCA_000432895.1_MGS449	-	-
Eubacterium siraeum CAG:80	1263080	PRJEB1012	206851	Terrabacteria group	Firmicutes	2.62353	44.8	-	CBFJ01	156	2344	2308	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138627	GCA_000434795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/795/GCA_000434795.1_MGS80	-	-
Coraliomargarita sp. CAG:312	1262865	PRJEB825	206857	PVC group	Verrucomicrobia	2.44311	46.2	-	CBJS01	111	2093	2060	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138785	GCA_000438015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/015/GCA_000438015.1_MGS312	-	-
Crenarchaeota archaeon SCGC AAA471-B23	1052802	PRJNA192284	192284	TACK group	Crenarchaeota	1.11069	28.7	-	ASPO01	58	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441603	GCA_000405885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/885/GCA_000405885.1_ASM40588v1	23851394	SCGC AAA471-B23
Crenarchaeota archaeon SCGC AAA471-C03	1052803	PRJNA192285	192285	TACK group	Crenarchaeota	0.797737	28.7	-	AQTC01	59	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440401	GCA_000402895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/895/GCA_000402895.1_ASM40289v1	23851394	SCGC AAA471-C03
Marinimicrobia bacterium JGI 0000039-D08	1047055	PRJNA192291	192291	FCB group	Candidatus Marinimicrobia	2.34719	47.4	-	ASZK01	103	-	-	6/3/13	7/28/15	Scaffold	DOE Joint Genome Institute	SAMN02441601	GCA_000405265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/265/GCA_000405265.1_ASM40526v1	23851394	JGI 0000039-D08
Marinimicrobia bacterium JGI 0000039-E15	1047056	PRJNA192292	192292	FCB group	Candidatus Marinimicrobia	0.493984	47.2	-	AQSY01	30	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441063	GCA_000403015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/015/GCA_000403015.1_ASM40301v1	23851394	JGI 0000039-E15
Marinimicrobia bacterium JGI 0000039-O11	1047058	PRJNA192297	192297	FCB group	Candidatus Marinimicrobia	0.828046	47	-	AQSX01	75	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440399	GCA_000403095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/095/GCA_000403095.1_ASM40309v1	23851394	JGI 0000039-O11
Crenarchaeota archaeon SCGC AAA471-L13	1052804	PRJNA192312	192312	TACK group	Crenarchaeota	0.833677	28.7	-	AQSU01	48	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440397	GCA_000402095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/095/GCA_000402095.1_ASM40209v1	23851394	SCGC AAA471-L13
Marinimicrobia bacterium JGI 0000059-D20	1047059	PRJNA192316	192316	FCB group	Candidatus Marinimicrobia	0.772719	47.7	-	AQSS01	34	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441404	GCA_000402135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/135/GCA_000402135.1_ASM40213v1	23851394	JGI 0000059-D20
Marinimicrobia bacterium JGI 0000059-E23	1047060	PRJNA192317	192317	FCB group	Candidatus Marinimicrobia	0.61806	47.3	-	AQSR01	41	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440396	GCA_000402155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/155/GCA_000402155.1_ASM40215v1	23851394	JGI 0000059-E23
Marinimicrobia bacterium SCGC AAA298-D23	939857	PRJNA192361	192361	FCB group	Candidatus Marinimicrobia	0.979176	31.5	-	AQSI01	10	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441741	GCA_000402655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/655/GCA_000402655.1_ASM40265v1	23851394	SCGC AAA298-D23
Marinimicrobia bacterium SCGC AAA076-M08	1007124	PRJNA192362	192362	FCB group	Candidatus Marinimicrobia	0.392252	32.6	-	AQSH01	18	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441740	GCA_000402675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/675/GCA_000402675.1_ASM40267v1	23851394	SCGC AAA076-M08
Marinimicrobia bacterium JGI 0000077-B04	1104641	PRJNA192367	192367	FCB group	Candidatus Marinimicrobia	0.496915	47.4	-	AQSG01	28	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441739	GCA_000402695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/695/GCA_000402695.1_ASM40269v1	23851394	JGI 0000077-B04
Marinimicrobia bacterium SCGC AAA160-B08	1007121	PRJNA192377	192377	FCB group	Candidatus Marinimicrobia	0.92255	32.8	-	AQSD01	26	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441750	GCA_000402755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/755/GCA_000402755.1_ASM40275v1	23851394	SCGC AAA160-B08
Euryarchaeota archaeon SCGC AAA252-I15	913322	PRJNA192382	192382	Euryarchaeota	unclassified Euryarchaeota	1.32568	44.8	-	AQSC01	61	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441070	GCA_000402775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/775/GCA_000402775.1_ASM40277v1	23851394	SCGC AAA252-I15
Marinimicrobia bacterium SCGC AAA160-C11	1007122	PRJNA192387	192387	FCB group	Candidatus Marinimicrobia	0.824595	32.7	-	AQSB01	17	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441069	GCA_000402795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/795/GCA_000402795.1_ASM40279v1	23851394	SCGC AAA160-C11
Marinimicrobia bacterium SCGC AAA160-I06	1007123	PRJNA192388	192388	FCB group	Candidatus Marinimicrobia	1.12562	32.6	-	AQSA01	45	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440392	GCA_000402815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/815/GCA_000402815.1_ASM40281v1	23851394	SCGC AAA160-I06
Marinimicrobia bacterium JGI 0000090-C20	1104671	PRJNA192481	192481	FCB group	Candidatus Marinimicrobia	0.566695	47.6	-	ASPH01	46	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440927	GCA_000405825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/825/GCA_000405825.1_ASM40582v1	23851394	JGI 0000090-C20
Marinimicrobia bacterium SCGC AAA257-N23	1047054	PRJNA192500	192500	FCB group	Candidatus Marinimicrobia	0.948616	38.7	-	AQRN01	71	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440390	GCA_000402455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/455/GCA_000402455.1_ASM40245v1	23851394	SCGC AAA257-N23
Candidatus Aenigmarchaeota archaeon JGI 0000106-F11	1130284	PRJNA192504	192504	DPANN group	Candidatus Aenigmarchaeota	0.361035	37.5	-	ASMO01	24	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440538	GCA_000404305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/305/GCA_000404305.1_ASM40430v1	23851394	JGI 0000106-F11
Chthonomonas calidirosea T49	1303518	PRJEB1573	207044	Terrabacteria group	Armatimonadetes	3.43786	54.6	chromosome I:NC_021487.1/HF951689.1	-	1	2919	2837	6/4/13	4/8/17	Chromosome	GNS	SAMEA2272150	GCA_000427095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/095/GCA_000427095.1_T49	-	T49
Mycobacterium septicum DSM 44393	1341646	PRJEB4006	207065	Terrabacteria group	Actinobacteria	6.90883	66.6	-	CBMO01	7	6584	6253	6/27/13	4/17/17	Scaffold	URMITE	SAMEA2272699	GCA_000455325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/325/GCA_000455325.1_Mycobacterium_septicum_DSM44393T	-	type strain: DSM 44393
Aminobacter aminovorans	83263	PRJNA316647	316647	Proteobacteria	Alphaproteobacteria	6.89073	63.0916	chromosome:NZ_CP015005.1/CP015005.1; plasmid pAA01:NZ_CP015006.1/CP015006.1; plasmid pAA02:NZ_CP015007.1/CP015007.1; plasmid pAA03:NZ_CP015008.1/CP015008.1; plasmid pAA04:NZ_CP015009.1/CP015009.1	-	5	6706	6461	3/31/16	4/17/17	Complete Genome	Korea Research Institute of Bioscience and Biotechnology	SAMN04589126	GCA_001605015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/015/GCA_001605015.1_ASM160501v1	-	KCTC 2477
Firmicutes bacterium CAG:424	1263022	PRJEB876	206811	Terrabacteria group	Firmicutes	3.02069	41.1	-	CBFI01	70	2873	2835	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138497	GCA_000432195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/195/GCA_000432195.1_MGS424	-	-
Odoribacter sp. CAG:788	1262909	PRJEB1007	206822	FCB group	Bacteroidetes/Chlorobi group	3.88327	42.8	-	CAZK01	61	3119	3078	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138584	GCA_000433935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/935/GCA_000433935.1_MGS788	-	-
Streptococcus phocae subsp. salmonis	1000562	PRJNA264154	264154	Terrabacteria group	Firmicutes	1.6592	39.6	-	JSAP01	105	1662	1412	11/6/14	4/9/17	Contig	Universidad Austral de Chile	SAMN03114893	GCA_000772915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/915/GCA_000772915.1_ASM77291v1	25502668	C-4
Winogradskyella psychrotolerans RS-3	641526	PRJNA208002	208002	FCB group	Bacteroidetes/Chlorobi group	4.33703	33.5	-	ATMR01	219	3750	3345	7/15/13	4/8/17	Contig	Centre for Cellular and Molecular Biology	SAMN02470013	GCA_000427335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/335/GCA_000427335.1_WiPs1.0	23950132	RS-3
Terriglobus sp. TAA 43	278961	PRJNA208396	208396	Acidobacteria	Acidobacteriia	4.94703	56.7	-	JUGR01	7	4193	4107	12/9/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02787029	GCA_000800015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/015/GCA_000800015.1_ASM80001v1	-	TAA 43
Natronomonas pharaonis DSM 2160	348780	PRJNA15742	15742	Euryarchaeota	Halobacteria	2.7497	63.0807	chromosome:NC_007426.1/CR936257.1; plasmid PL131:NC_007427.1/CR936258.1; plasmid PL23:NC_007428.1/CR936259.1	-	3	2819	2738	9/28/05	4/17/17	Complete Genome	Max Planck Institute	SAMEA3138222	GCA_000026045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/045/GCA_000026045.1_ASM2604v1	16169924	Gabara
Catenibacterium sp. CAG:290	1262767	PRJEB815	206810	Terrabacteria group	Firmicutes	2.01808	33.7	-	CBIQ01	121	2012	1992	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138770	GCA_000437715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/715/GCA_000437715.1_MGS290	-	-
Brevibacillus thermoruber 423	1346613	PRJNA208425	208425	Terrabacteria group	Firmicutes	4.4335	58.5	-	ATNE01	15	4327	4122	8/22/13	4/8/17	Scaffold	Marmara University	SAMN02210769	GCA_000454065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/065/GCA_000454065.1_ASM45406v1	24072869	423
Sphingobium chinhatense IP26	1346790	PRJNA208542	208542	Proteobacteria	Alphaproteobacteria	5.84784	64.1	-	AUDA01	236	5713	5382	7/10/13	4/17/17	Contig	University of Delhi	SAMN02471711	GCA_000421925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/925/GCA_000421925.1_ABySS	23990581	IP26
Paenibacillus lentimorbus NRRL B-30488	1244087	PRJNA177790	177790	Terrabacteria group	Firmicutes	3.91256	46.4	-	ANAT01	47	-	-	6/14/13	1/8/14	Contig	CSIR-National Botanical Research Institute	SAMN02469679	GCA_000411595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/595/GCA_000411595.1_PanLen2.5	-	NRRL B-30488
Sphingobium sp. TKS	1315974	PRJNA195946	195946	Proteobacteria	Alphaproteobacteria	6.22888	63.0804	chromosome 1:NZ_CP005083.1/CP005083.1; chromosome 2:NZ_CP005084.1/CP005084.1; plasmid pTK1:NZ_CP005085.1/CP005085.1; plasmid pTK2:NZ_CP005086.1/CP005086.1; plasmid pTK3:NZ_CP005087.1/CP005087.1; plasmid pTK4:NZ_CP005088.1/CP005088.1; plasmid pTK6:NZ_CP005090.1/CP005090.1; plasmid pTK7:NZ_CP005091.1/CP005091.1; plasmid pTK8:NZ_CP005092.1/CP005092.1; plasmid pTK9:NZ_CP005093.1/CP005093.1; plasmid pTKS:NZ_CP005089.1/CP005089.1	-	11	6120	5788	2/18/16	4/11/17	Complete Genome	"Graduate School of Life Sciences, Tohoku University"	SAMN04497510	GCA_001563265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/265/GCA_001563265.1_ASM156326v1	27056231	TKS
Flavobacterium saliperosum S13	1341155	PRJNA206421	206421	FCB group	Bacteroidetes/Chlorobi group	2.89493	39.6	-	AVFO01	76	2731	2652	11/22/13	4/9/17	Contig	Seoul National University	SAMN02470901	GCA_000498515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/515/GCA_000498515.1_Fsal1.0	-	S13
Pandoraea oxalativorans	573737	PRJNA262701	262701	Proteobacteria	Betaproteobacteria	6.50073	63.0653	chromosome:NZ_CP011253.3/CP011253.3; plasmid pPO70-1:NZ_CP011518.2/CP011518.2; plasmid pPO70-2:NZ_CP011519.2/CP011519.2; plasmid pPO70-3:NZ_CP011520.2/CP011520.2; plasmid pPO70-4:NZ_CP011521.2/CP011521.2	-	5	5772	5362	4/16/15	4/17/17	Complete Genome	University of Malaya	SAMN03085480	GCA_000972785.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/785/GCA_000972785.3_ASM97278v3	-	DSM 23570
Hymenobacter sp. PAMC 26628	1484118	PRJNA310357	310357	FCB group	Bacteroidetes/Chlorobi group	5.36698	63.0349	chromosome:NZ_CP014304.1/CP014304.1; plasmid unnamed:NZ_CP014303.1/CP014303.1	-	2	4636	4457	2/17/16	4/12/17	Complete Genome	Korea Polar Research Institute	SAMN04451522	GCA_001562275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/275/GCA_001562275.1_ASM156227v1	-	PAMC 26628
Leifsonia rubra CMS 76R	1348338	PRJNA208981	208981	Terrabacteria group	Actinobacteria	2.7754	59.2	-	ATIA01	207	2639	2468	7/15/13	4/17/17	Contig	Centre for Cellular and Molecular Biology	SAMN02469437	GCA_000477555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/555/GCA_000477555.1_LeRu1.0	23950134	CMS 76R
Novosphingobium pentaromativorans US6-1	1088721	PRJNA257352	257352	Proteobacteria	Alphaproteobacteria	5.45758	63.0142	chromosome:NZ_CP009291.1/CP009291.1; plasmid pLA3:NZ_CP009292.1/CP009292.1; plasmid pLA4:NZ_CP009293.1/CP009293.1; plasmid pLA5:NZ_CP009295.1/CP009295.1; plasmid pLA1:NZ_CP009294.1/CP009294.1; plasmid pLA2:NZ_CP009296.1/CP009296.1	-	6	5129	4933	10/20/14	4/9/17	Complete Genome	KIOST	SAMN03002180	GCA_000767465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/465/GCA_000767465.1_ASM76746v1	26594308	US6-1
Janthinobacterium sp. LM6	1938606	PRJNA363094	363094	Proteobacteria	Betaproteobacteria	6.28846	63	chromosome:NZ_CP019510.1/CP019510.1	-	1	5523	5350	2/17/17	4/17/17	Complete Genome	The University of Chicago	SAMN06261476	GCA_002002885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/885/GCA_002002885.1_ASM200288v1	-	LM6
Corynebacterium glaucum	187491	PRJNA289543	289543	Terrabacteria group	Actinobacteria	2.51866	63	chromosome:NZ_CP019688.1/CP019688.1	-	1	2435	2311	2/15/17	9/9/17	Complete Genome	Bielefeld University	SAMN03854643	GCA_002287505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/505/GCA_002287505.1_ASM228750v1	-	DSM 30827
Kitasatospora cheerisanensis KCTC 2395	1348663	PRJNA209102	209102	Terrabacteria group	Actinobacteria	8.17427	73.1	-	JNBY01	5	7368	6519	5/28/14	4/17/17	Scaffold	"College of Pharmacy, Yeungnam University"	SAMN02796068	GCA_000696185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/185/GCA_000696185.1_ASM69618v1	24948770	KCTC 2395
Thauera terpenica 58Eu	1348657	PRJNA209110	209110	Proteobacteria	Betaproteobacteria	4.14579	64.3	-	ATJV01	135	3835	3676	8/2/13	6/20/17	Contig	Norwegian University of Life Sciences	SAMN02210755	GCA_000443165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/165/GCA_000443165.1_TT	-	58Eu
Wolbachia endosymbiont str. valsugana of Drosophila suzukii	1261555	PRJEB596	183210	Proteobacteria	Alphaproteobacteria	1.41535	35.2	-	CAOU02	110	1383	1225	12/10/12	4/17/17	Contig	CRI-FEM	SAMEA2271959	GCA_000333795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/795/GCA_000333795.2_ASM33379v2	-	valsugana
Streptomyces aurantiacus	47760	PRJNA293375	293375	Terrabacteria group	Actinobacteria	9.25525	70.2	-	LIPP01	561	8237	7580	10/28/15	3/13/17	Scaffold	USDA/ARS/NCAUR	SAMN04002962	GCA_001418335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/335/GCA_001418335.1_ASM141833v1	-	NRRL ISP-5412
Rhizobium nepotum 39/7	1368418	PRJNA270495	270495	Proteobacteria	Alphaproteobacteria	5.32887	59.1	-	JWJH01	79	5106	4884	3/10/15	4/17/17	Contig	"University of Belgrade, Faculty of Agriculture"	SAMN03266536	GCA_000949865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/865/GCA_000949865.1_ASM94986v1	25908139	39/7
Rhizobium pusense	648995	PRJNA304250	304250	Proteobacteria	Alphaproteobacteria	5.98342	58.9	-	LNZW01	35	5788	5383	12/2/16	4/16/17	Scaffold	"Centro de Ciencias Genomicas, UNAM"	SAMN04296913	GCA_001888145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/145/GCA_001888145.1_ASM188814v1	27833604	CCGM10
Ectothiorhodospira sp. BSL-9	1442136	PRJNA232800	232800	Proteobacteria	Gammaproteobacteria	3.55008	63	chromosome:NZ_CP011994.1/CP011994.1	-	1	3286	3103	4/27/16	4/12/17	Complete Genome	University of California Santa Cruz	SAMN03795182	GCA_001632845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/845/GCA_001632845.1_ASM163284v1	-	BSL-9
Haloquadratum sp. J07HQX50	1238426	PRJNA176227	176227	Euryarchaeota	Halobacteria	3.01991	50.2	-	ARPZ01	2	2908	2866	6/26/13	9/4/13	Scaffold	"University of California, San Diego, Scripps Institution of Oceanography"	SAMN01940911	GCA_000416005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/005/GCA_000416005.1_HQX_031812	23637883	-
Salinibacter sp. J07SB67	1238423	PRJNA176232	176232	FCB group	Bacteroidetes/Chlorobi group	1.93102	58.7	-	ARQC01	443	-	-	6/26/13	9/4/13	Scaffold	"University of California, San Diego, Scripps Institution of Oceanography"	SAMN01940911	GCA_000416125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/125/GCA_000416125.1_J07AB_Salin_021412	23637883	-
Streptomyces afghaniensis 772	1283301	PRJNA186688	186688	Terrabacteria group	Actinobacteria	9.84877	71	-	AOPY01	1726	8887	7379	6/26/13	4/11/17	Scaffold	University of Freiburg	SAMN01893930	GCA_000415505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/505/GCA_000415505.1_STAFG	-	772
Olleya sp. VCSA23	745717	PRJNA210208	210208	FCB group	Bacteroidetes/Chlorobi group	3.46762	31.1	-	JADS01	50	3156	3053	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02584979	GCA_000518505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/505/GCA_000518505.1_ASM51850v1	-	VCSA23
Blautia schinkii DSM 10518	1410649	PRJNA223460	223460	Terrabacteria group	Firmicutes	6.67933	45.6	-	JNKJ01	65	5889	5648	6/11/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02841221	GCA_000702025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/025/GCA_000702025.1_ASM70202v1	-	DSM 10518
Ralstonia insidiosa	190721	PRJNA324646	324646	Proteobacteria	Betaproteobacteria	6.177	62.9956	chromosome 1:NZ_CP016022.1/CP016022.1; chromosome 2:NZ_CP016023.1/CP016023.1; plasmid pRI-1:NZ_CP016024.1/CP016024.1; plasmid pRI-2:NZ_CP016025.1/CP016025.1	-	4	5886	5737	6/14/16	4/12/17	Complete Genome	USDA-ARS	SAMN05212263	GCA_001663855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/855/GCA_001663855.1_ASM166385v1	-	ATCC 49129
Amorphus coralli DSM 19760	1120983	PRJNA174976	174976	Proteobacteria	Alphaproteobacteria	4.31754	67.2	-	ARFZ01	12	3914	3834	4/19/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440442	GCA_000374525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/525/GCA_000374525.1_ASM37452v1	-	DSM 19760
Deinococcus deserti VCD115	546414	PRJNA16691	16691	Terrabacteria group	Deinococcus-Thermus	3.85533	62.9751	chromosome:NC_012526.1/CP001114.1; plasmid 1:NC_012527.1/CP001115.1; plasmid 2:NC_012529.1/CP001116.1; plasmid 3:NC_012528.1/CP001117.1	-	4	3609	3503	4/2/09	4/17/17	Complete Genome	Genoscope	SAMN02603250	GCA_000020685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/685/GCA_000020685.1_ASM2068v1	"193,701,651,987,538,000,000,000"	VCD115
Lysinibacillus sinduriensis BLB-1 = JCM 15800	1384057	PRJNA239543	239543	Terrabacteria group	Firmicutes	4.01705	38.7	-	JPVO01	55	3887	3764	11/6/14	4/17/17	Contig	Huazhong Agricultural University	SAMN02953198	GCA_000772955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/955/GCA_000772955.1_ASM77295v1	-	JCM 15800
Thermofilum sp. ex4484_15	2012526	PRJNA362212	362212	TACK group	Crenarchaeota	0.721479	42.6	-	NJEH01	67	858	809	8/16/17	8/16/17	Contig	The University of Texas at Austin	SAMN06647953	GCA_002254595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/595/GCA_002254595.1_ASM225459v1	-	-
Desulfovibrio alkalitolerans DSM 16529	1121439	PRJNA208570	208570	Proteobacteria	delta/epsilon subdivisions	3.20233	64.5	-	ATHI01	32	2945	2874	7/11/13	4/17/17	Contig	Oak Ridge National Lab	SAMN02207451	GCA_000422245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/245/GCA_000422245.1_D_alkalitolerans_DSM16529_v1.0	23950126	DSM 16529
Corynebacterium pseudodiphtheriticum DSM 44287	1121368	PRJNA215660	215660	Terrabacteria group	Actinobacteria	2.26101	55.3	-	JIAH01	13	2044	1926	4/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743909	GCA_000688415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/415/GCA_000688415.1_ASM68841v1	-	DSM 44287
Halonotius sp. J07HN6	1238427	PRJNA176228	176228	Euryarchaeota	Halobacteria	2.529	62.2	-	ARQA01	6	2964	2913	6/26/13	9/4/13	Scaffold	"University of California, San Diego, Scripps Institution of Oceanography"	SAMN01940911	GCA_000416025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/025/GCA_000416025.1_HN6_031912	23637883	-
Lysinibacillus manganicus DSM 26584	1384049	PRJNA239539	239539	Terrabacteria group	Firmicutes	4.0472	34.9	-	JPVN01	81	3866	3788	11/6/14	4/9/17	Contig	Huazhong Agricultural University	SAMN02953182	GCA_000772945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/945/GCA_000772945.1_ASM77294v1	-	DSM 26584
Burkholderia sp. HB1	1678678	PRJNA288741	288741	Proteobacteria	Betaproteobacteria	7.20617	62.9398	chromosome 1:NZ_CP012192.1/CP012192.1; chromosome 2:NZ_CP012193.1/CP012193.1	-	2	6420	6231	9/17/15	4/11/17	Complete Genome	Tohoku university	SAMN03837635	GCA_001293045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/045/GCA_001293045.1_ASM129304v1	26543118	HB1
Vibrio albensis ATCC 14547	1408477	PRJNA223123	223123	Proteobacteria	Gammaproteobacteria	3.92928	47.5	-	JADA01	61	3699	3401	1/10/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02585008	GCA_000518145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/145/GCA_000518145.1_ASM51814v1	-	ATCC 14547
Leeuwenhoekiella sp. Hel_I_48	1392488	PRJNA217201	217201	FCB group	Bacteroidetes/Chlorobi group	4.28127	36.5	-	JHZY01	5	3726	3576	4/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743906	GCA_000687915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/915/GCA_000687915.1_ASM68791v1	-	Hel_I_48
Planktothrix prolifica NIVA-CYA 406	545626	PRJNA212882	212882	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.76332	39.7	-	AVFV01	10	5176	4782	9/6/13	4/9/17	Scaffold	University of Oslo	SAMN02261504	GCA_000464765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/765/GCA_000464765.1_NC406_1	23995927	NIVA-CYA 406
Exiguobacterium undae DSM 14481	1397693	PRJNA218042	218042	Terrabacteria group	Firmicutes	3.24611	47.8	-	JHZV01	4	3300	3207	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743962	GCA_000620805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/805/GCA_000620805.1_ASM62080v1	25323723	DSM 14481
Corynebacterium efficiens YS-314	196164	PRJNA305	305	Terrabacteria group	Actinobacteria	3.2195	62.9346	chromosome:NC_004369.1/BA000035.2; plasmid pCE2:NC_004319.1/AP005225.1; plasmid pCE3:NC_004320.1/AP005226.1	-	3	2959	2837	11/15/02	5/10/17	Complete Genome	NITE	SAMD00061103	GCA_000011305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/305/GCA_000011305.1_ASM1130v1	12840036	YS-314
Sphingobium lactosutens DS20	1331060	PRJNA201649	201649	Proteobacteria	Alphaproteobacteria	5.36025	63	-	ATDP01	110	5283	4971	8/9/13	4/17/17	Contig	University of Delhi	SAMN02471713	GCA_000445105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/105/GCA_000445105.1_ASM44510v1	24051323	DS20
Paraburkholderia sp. BN5	2026199	PRJNA398462	398462	Proteobacteria	Betaproteobacteria	8.90772	62.9278	chromosome 1:NZ_CP022989.1/CP022989.1; chromosome 2:NZ_CP022990.1/CP022990.1; plasmid pBN1:NZ_CP022991.1/CP022991.1; plasmid pBN2:NZ_CP022992.1/CP022992.1; plasmid pBN3:NZ_CP022993.1/CP022993.1; plasmid pBN4:NZ_CP022994.1/CP022994.1; plasmid pBN5:NZ_CP022995.1/CP022995.1; plasmid pBN6:NZ_CP022996.1/CP022996.1	-	8	8131	7755	8/30/17	9/27/17	Complete Genome	Chung-Ang University	SAMN07510739	GCA_002278075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/075/GCA_002278075.1_ASM227807v1	-	BN5
Cyclobacterium qasimii M12-11B	641524	PRJNA209568	209568	FCB group	Bacteroidetes/Chlorobi group	6.29193	38.8	-	ATNM01	202	5079	4467	7/15/13	4/8/17	Contig	Centre for Cellular and Molecular Biology	SAMN02469438	GCA_000427295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/295/GCA_000427295.1_CyQa1.0	23950138	M12-11B
Sphingobium sp. RAC03	1843368	PRJNA319832	319832	Proteobacteria	Alphaproteobacteria	4.36975	62.9166	chromosome:NZ_CP016456.1/CP016456.1; plasmid pBSY17_1:NZ_CP016453.1/CP016453.1; plasmid pBSY17_2:NZ_CP016457.1/CP016457.1; plasmid pBSY17_3:NZ_CP016455.1/CP016455.1; plasmid pBSY17_4:NZ_CP016454.1/CP016454.1	-	5	4161	4009	8/25/16	4/13/17	Complete Genome	Los Alamos National Laboratory	SAMN04909708	GCA_001713415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/415/GCA_001713415.1_ASM171341v1	-	RAC03
Alicyclobacillus acidoterrestris ATCC 49025	1356854	PRJNA210955	210955	Terrabacteria group	Firmicutes	4.06355	52.2	-	AURB01	207	4065	3803	8/5/13	4/8/17	Contig	Agricultural Research Organisation	SAMN02230327	GCA_000444055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/055/GCA_000444055.1_Alicyclobac_acidoter_v1	24009113	ATCC 49025
Pantoea dispersa EGD-AAK13	1358411	PRJNA211932	211932	Proteobacteria	Gammaproteobacteria	4.76458	57.8	-	AVSS01	39	4427	4298	9/11/13	4/4/17	Contig	National Environmental Engineering Research Institute-CSIR	SAMN02469686	GCA_000465555.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/555/GCA_000465555.2_GS_De_Novo_Assembly	-	EGD-AAK13
Loktanella cinnabarina LL-001	1337093	PRJDB1124	219081	Proteobacteria	Alphaproteobacteria	3.89624	66.7	-	BATB01	192	3804	3095	9/11/13	4/9/17	Contig	Japan Agency for Marine-Earth Science and Technology	SAMD00003104	GCA_000466965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/965/GCA_000466965.1_ASM46696v1	24233588	LL-001
Brevundimonas abyssalis TAR-001	1391729	PRJDB1125	219082	Proteobacteria	Alphaproteobacteria	2.97923	68.2	-	BATC01	128	2999	2429	9/11/13	4/9/17	Contig	Japan Agency for Marine-Earth Science and Technology	SAMD00008582	GCA_000466985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/985/GCA_000466985.1_ASM46698v1	24136847	TAR-001
Rubellimicrobium thermophilum DSM 16684	1123069	PRJNA178147	178147	Proteobacteria	Alphaproteobacteria	3.16314	69.1	-	AOLV01	10	3076	2477	7/31/13	4/17/17	Scaffold	Roseobacter SFB	SAMN02469744	GCA_000442315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/315/GCA_000442315.1_Ruthe	24501632	DSM 16684
Sphingobium ummariense RL-3	1346791	PRJNA208544	208544	Proteobacteria	Alphaproteobacteria	4.75405	65	-	AUWY01	139	4674	4321	8/13/13	4/17/17	Contig	University of Delhi	SAMN02471715	GCA_000447205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/205/GCA_000447205.1_ABySS_v1.3.3	24233594	RL-3
Franconibacter pulveris DSM 19144	1121863	PRJNA221041	221041	Proteobacteria	Gammaproteobacteria	4.71093	56.5	-	JHYZ01	30	4477	4286	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743983	GCA_000621185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/185/GCA_000621185.1_ASM62118v1	-	DSM 19144
Xanthomonas albilineans GPE PC73	380358	PRJEA16687	16687	Proteobacteria	Gammaproteobacteria	3.8523	62.9055	chromosome:NC_013722.1/FP565176.1; plasmid plasmI:NC_017557.1/FP340279.1; plasmid plasmII:NC_017556.1/FP340278.1; plasmid plasmIII:NC_017555.1/FP340277.1	-	4	3262	3067	1/7/10	4/10/17	Complete Genome	Genoscope	SAMEA3138291	GCA_000087965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/087/965/GCA_000087965.1_ASM8796v1	20017926	GPE PC73
Mesorhizobium opportunistum WSM2075	536019	PRJNA33861	33861	Proteobacteria	Alphaproteobacteria	6.88444	62.9	chromosome:NC_015675.1/CP002279.1	-	1	6779	6514	6/14/11	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02232036	GCA_000176035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/035/GCA_000176035.2_ASM17603v2	-	WSM2075
Chlamydia ibidis 10-1398/6	1046581	PRJNA188464	188464	PVC group	Chlamydiae	1.14607	38.3	-	APJW01	4	1000	939	8/26/13	4/8/17	Contig	"Institute for Genome Sciences, University of Maryland School of Medicine"	SAMN02222159	GCA_000454725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/725/GCA_000454725.1_ibidis.assembly	-	10-1398/6
Psychrobacter aquaticus CMS 56	1354303	PRJNA210528	210528	Proteobacteria	Gammaproteobacteria	3.21641	43.1	-	AUSW01	38	2745	2645	9/24/13	4/17/17	Contig	Centre for Cellular and Molecular Biology	SAMN02469418	GCA_000471625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/625/GCA_000471625.1_PsAq1.0	24201199	CMS 56
Holospora obtusa F1	1399147	PRJNA218561	218561	Proteobacteria	Alphaproteobacteria	1.33484	35.2	-	AWTR02	91	1227	1064	9/23/13	4/17/17	Contig	Yamaguchi University	SAMN02472141	GCA_000469665.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/665/GCA_000469665.2_ASM46966v2	25115770	F1
Halorhabdus utahensis DSM 12940	519442	PRJNA29305	29305	Euryarchaeota	Halobacteria	3.1168	62.9	chromosome:NC_013158.1/CP001687.1	-	1	2996	2919	8/27/09	3/22/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002611	GCA_000023945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/945/GCA_000023945.1_ASM2394v1	21304660	DSM 12940
Halanaeroarchaeum sulfurireducens	1604004	PRJNA253523	253523	Euryarchaeota	Halobacteria	2.20974	62.8558	chromosome:NZ_CP008874.1/CP008874.1; plasmid pHSR2-01:NZ_CP008875.1/CP008875.1	-	2	2239	2149	5/21/15	3/22/17	Complete Genome	C.N.R. - Institute for Coastal Marine Environment (IAMC)	SAMN02899090	GCA_001011115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/115/GCA_001011115.1_ASM101111v1	25978546	HSR2
Leifsonia aquatica ATCC 14665	1358026	PRJNA211798	211798	Terrabacteria group	Actinobacteria	4.2261	70.2	-	AWVQ01	945	4417	3702	9/18/13	4/9/17	Scaffold	The Genome Institute	SAMN02436753	GCA_000469485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/485/GCA_000469485.1_ASM46948v1	-	ATCC 14665
Aeropyrum camini SY1 = JCM 12091	1198449	PRJDB807	243718	TACK group	Crenarchaeota	1.59105	56.7	-	BBBZ01	41	1894	1628	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00000424	GCA_001316065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/065/GCA_001316065.1_ASM131606v1	-	JCM 12091
Mesorhizobium amorphae CCNWGS0123	1082933	PRJNA318467	318467	Proteobacteria	Alphaproteobacteria	7.34395	62.8379	chromosome:NZ_CP015318.1/CP015318.1; plasmid pM0123a:NZ_CP015319.1/CP015319.1; plasmid pM0123b:NZ_CP015320.1/CP015320.1; plasmid pM0123c:NZ_CP015321.1/CP015321.1; plasmid pM0123d:NZ_CP015322.1/CP015322.1	-	5	6958	6632	7/18/16	4/13/17	Complete Genome	State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau	SAMN04853078	GCA_001686985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/985/GCA_001686985.1_ASM168698v1	-	CCNWGS0123
Pandoraea sputorum	93222	PRJEB6403	251923	Proteobacteria	Betaproteobacteria	5.74312	62.8	chromosome 1:NZ_LT906435.1/LT906435.1	-	1	5063	4917	8/15/17	8/28/17	Complete Genome	SC	SAMEA4530655	GCA_900187205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/205/GCA_900187205.1_52191_D01	-	NCTC13161
Pseudomonas chlororaphis subsp. aurantiaca	86192	PRJDB3019	347971	Proteobacteria	Gammaproteobacteria	6.99793	62.8	chromosome:AP014623.1	-	1	6392	6309	10/8/16	10/8/16	Complete Genome	"Department of Material and Environmental Chemistry, Graduate School of Engineering, Utsunomiya University"	SAMD00018963	GCA_002355875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/875/GCA_002355875.1_ASM235587v1	-	StFRB508
Coprobacter fastidiosus NSB1	1349822	PRJNA209420	209420	FCB group	Bacteroidetes/Chlorobi group	3.41391	38.3	-	AWWG01	58	2738	2587	9/30/13	6/12/17	Scaffold	Pirogov Russian National Research Medical University	SAMN02470788	GCA_000473955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/955/GCA_000473955.1__oprFasNSB1	24604645	NSB1
Rhizobium undicola ORS 992 = ATCC 700741	1370122	PRJNA223117	223117	Proteobacteria	Alphaproteobacteria	4.13386	59.3	-	JHXQ01	49	3791	3620	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02744004	GCA_000621665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/665/GCA_000621665.1_ASM62166v1	-	ATCC 700741
Halomonas chromatireducens	507626	PRJNA302842	302842	Proteobacteria	Gammaproteobacteria	3.97365	62.8	chromosome:NZ_CP014226.1/CP014226.1	-	1	3748	3509	2/2/16	4/16/17	Complete Genome	Institute of Bioengineering	SAMN04281796	GCA_001545155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/155/GCA_001545155.1_ASM154515v1	26988058	AGD 8-3
Anaerovibrio sp. RM50	1200557	PRJNA223479	223479	Terrabacteria group	Firmicutes	2.78075	44.9	-	JHWV01	40	2640	2522	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02744020	GCA_000622005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/005/GCA_000622005.1_ASM62200v1	-	RM50
Franconibacter helveticus 513	1405120	PRJNA221525	221525	Proteobacteria	Gammaproteobacteria	4.84187	55.4	-	AXDK01	377	4855	4488	10/29/13	4/9/17	Contig	"OARSA, CFSAN"	SAMN02364109	GCA_000485945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/945/GCA_000485945.1_Ehel513.sqn	-	513
Pseudobutyrivibrio sp. MD2005	1410616	PRJNA223452	223452	Terrabacteria group	Firmicutes	3.08644	38.4	-	JHXE01	26	2814	2687	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02744014	GCA_000621865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/865/GCA_000621865.1_ASM62186v1	-	MD2005
Kandleria vitulina DSM 20405	1410657	PRJNA223467	223467	Terrabacteria group	Firmicutes	2.12671	35	-	JNKN01	75	2200	2075	6/11/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02841193	GCA_000702065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/065/GCA_000702065.1_ASM70206v1	-	DSM 20405
Methyloceanibacter caenitepidi	1384459	PRJDB3104	271864	Proteobacteria	Alphaproteobacteria	3.42496	62.8	chromosome:NZ_AP014648.1/AP014648.1	-	1	3284	3213	1/7/15	4/10/17	Complete Genome	"National Institute of Advanced Industrial Science and Technology, Japan"	SAMD00019677	GCA_000828475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/475/GCA_000828475.1_ASM82847v1	-	Gela4
Prevotella brevis ATCC 19188	1408472	PRJNA223126	223126	FCB group	Bacteroidetes/Chlorobi group	3.49252	48.7	-	JHXM01	32	2747	2643	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02744010	GCA_000621725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/725/GCA_000621725.1_ASM62172v1	-	ATCC 19188
Cetobacterium somerae ATCC BAA-474	1319815	PRJNA210739	210739	Fusobacteria	Fusobacteriia	3.06825	28.6	-	AXZF01	174	2910	2776	10/23/13	4/17/17	Scaffold	Washington University	SAMN02436737	GCA_000479045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/045/GCA_000479045.1_ASM47904v1	-	ATCC BAA-474
Candidatus Phytoplasma solani	69896	PRJEB1231	223368	Terrabacteria group	Tenericutes	0.570238	28.7	chromosome:FO393427.1	-	1	520	520	10/22/13	11/3/16	Chromosome	MPIMG	SAMEA4532330	GCA_000970375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/375/GCA_000970375.1_ASM97037v1	-	284/09
Acinetobacter nectaris CIP 110549	1392540	PRJNA217360	217360	Proteobacteria	Gammaproteobacteria	2.66894	36.7	-	AYER01	29	2588	2474	10/29/13	4/6/17	Scaffold	Broad Institute	SAMN02335355	GCA_000488215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/215/GCA_000488215.1_Acin_nect_CIP110549_V2	-	CIP 110549
Pandoraea sputorum	93222	PRJNA262705	262705	Proteobacteria	Betaproteobacteria	5.743	62.8	chromosome:NZ_CP010431.2/CP010431.2	-	1	5071	4920	1/6/15	4/17/17	Complete Genome	University of Malaya	SAMN03085484	GCA_000814845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/845/GCA_000814845.2_ASM81484v2	-	DSM 21091
Smithella sp. F21	1538640	PRJNA259219	259219	Proteobacteria	delta/epsilon subdivisions	1.6336	49.9	-	JQIE01	245	1391	1346	9/2/14	10/9/14	Scaffold	Hydrocarbon Metagenomic Project	SAMN03002179	GCA_000747085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/085/GCA_000747085.1_ASM74708v1	25342693	-
Shewanella decolorationis S12	1353536	PRJNA210345	210345	Proteobacteria	Gammaproteobacteria	4.84397	47.1	-	AXZL01	77	4291	4110	10/28/13	4/17/17	Scaffold	Guangdong Institute of Microbiology	SAMN02469853	GCA_000485795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/795/GCA_000485795.1_SheDec2.0	24309738	S12
Mucispirillum schaedleri ASF457	1379858	PRJNA213740	213740	Deferribacteres	Deferribacteres	2.33225	31.2	-	AYGZ01	22	2173	2097	10/29/13	4/9/17	Scaffold	Broad Institute	SAMN02297858	GCA_000487995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/995/GCA_000487995.1_Muci_scha_ASF457_V1	24723722	ASF457
Lyngbya aestuarii BL J	1348334	PRJNA208960	208960	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.86763	41.2	-	AUZM01	438	5671	5220	10/21/13	4/16/17	Contig	Arizona State University	SAMN02469313	GCA_000478195.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/195/GCA_000478195.2_ASM47819v2	24376438	BL J
Arthrobacter sp. PAMC 25486	1494608	PRJNA244892	244892	Terrabacteria group	Actinobacteria	4.59358	62.8	chromosome:NZ_CP007595.1/CP007595.1	-	1	4154	3995	11/19/14	4/10/17	Complete Genome	Korea Atomic Energy Research Institute	SAMN03196588	GCA_000785535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/535/GCA_000785535.1_ASM78553v1	-	PAMC 25486
Lactobacillus fabifermentans DSM 21115	1413187	PRJNA222257	222257	Terrabacteria group	Firmicutes	3.2791	45	-	AYGX02	181	3134	2992	11/25/13	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369445	GCA_000498955.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/955/GCA_000498955.2_NMG01	26415554	DSM 21115
Youngiibacter fragilis 232.1	994573	PRJNA223318	223318	Terrabacteria group	Firmicutes	3.98823	46.6	-	AXUN02	240	3818	3667	11/4/13	4/11/17	Scaffold	University of Oklahoma	SAMN02378756	GCA_000495435.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/435/GCA_000495435.3_ASM49543v3	24459265	232.1
Streptomyces rapamycinicus NRRL 5491	1343740	PRJNA207502	207502	Terrabacteria group	Actinobacteria	12.7007	70.5	chromosome:CP006567.1	-	1	10144	10002	7/8/13	1/31/14	Chromosome	University of Kaiserslautern	SAMN02604192	GCA_000418455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/455/GCA_000418455.1_ASM41845v1	-	NRRL 5491
Asticcacaulis sp. AC460	1282360	PRJNA186529	186529	Proteobacteria	Alphaproteobacteria	5.40664	62	-	AWGD01	90	4723	4588	11/6/13	4/9/17	Contig	Indiana University	SAMN02469915	GCA_000495795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/795/GCA_000495795.1_AspAC460.1.0	24463524	AC460
Pseudomonas chlororaphis subsp. aurantiaca	86192	PRJNA257686	257686	Proteobacteria	Gammaproteobacteria	6.70206	62.8	chromosome:NZ_CP009290.1/CP009290.1	-	1	6085	5828	10/1/14	4/2/17	Complete Genome	Shanghai Normal University	SAMN02953966	GCA_000761195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/195/GCA_000761195.1_ASM76119v1	-	JD37
Mesorhizobium australicum WSM2073	754035	PRJNA47287	47287	Proteobacteria	Alphaproteobacteria	6.20053	62.8	chromosome:NC_019973.1/CP003358.1	-	1	6068	5795	12/28/12	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02232035	GCA_000230995.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/995/GCA_000230995.3_ASM23099v3	-	WSM2073
Bifidobacterium bifidum S17	883062	PRJNA51963	51963	Terrabacteria group	Actinobacteria	2.18688	62.8	chromosome:NC_014616.1/CP002220.1	-	1	1864	1715	10/19/10	3/30/17	Complete Genome	"Institute of Microbiology and Biotechnology, University of Ulm"	SAMN02603395	GCA_000164965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/965/GCA_000164965.1_ASM16496v1	21037011	S17
Thermophagus xiamenensis	385682	PRJNA67937	67937	FCB group	Bacteroidetes/Chlorobi group	3.86353	39.1	-	AFSL01	114	3002	2892	7/6/11	4/17/17	Contig	"Key Laboratory of Marine Biogenetic Resources, Third Institute of Oceanography, State Oceanic Administration"	SAMN02471207	GCA_000220155.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/155/GCA_000220155.2_ASM22015v2	21914884	HS1
Brevibacillus panacihumi W25	1408254	PRJNA223198	223198	Terrabacteria group	Firmicutes	5.54594	50.1	-	AYJU01	11	5473	5156	11/20/13	4/17/17	Scaffold	Tianjin University	SAMN02378363	GCA_000503775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/775/GCA_000503775.1_version_1_for_the_Brevibacillus_panacihumi_W25_genome	24459276	W25
Flavobacterium limnosediminis JC2902	1341181	PRJNA206419	206419	FCB group	Bacteroidetes/Chlorobi group	3.46654	38.5	-	AVGG01	56	3133	3041	11/22/13	4/9/17	Contig	Seoul National University	SAMN02470908	GCA_000498535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/535/GCA_000498535.1_Flim1.0	-	JC2902
Halorhabdus tiamatea SARL4B	1033806	PRJEB1233	189729	Euryarchaeota	Halobacteria	3.14616	62.77	chromosome I:NC_021921.1/HF571520.1; plasmid II:NC_021913.1/HF571521.1	-	2	3124	2991	8/1/13	3/22/17	Complete Genome	MPI BREMEN	SAMEA2271992	GCA_000470655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/655/GCA_000470655.1_HATI1	24428220	type strain: SARL4B
Lutibaculum baratangense AMV1	631454	PRJNA211968	211968	Proteobacteria	Alphaproteobacteria	4.30078	68.6	-	AWXZ01	44	4065	3928	11/7/13	4/9/17	Contig	Centre for Cellular and Molecular Biology	SAMN02469419	GCA_000496075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/075/GCA_000496075.1_LuBa1.0	25059877	AMV1
Methyloglobulus morosus KoM1	1116472	PRJNA223505	223505	Proteobacteria	Gammaproteobacteria	4.13694	47.3	-	AYLO01	183	3809	3581	11/13/13	4/11/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02469828	GCA_000496735.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/735/GCA_000496735.2_MKO1	24356841	KoM1
Sporolactobacillus laevolacticus DSM 442	1395513	PRJNA217761	217761	Terrabacteria group	Firmicutes	3.59018	42.7	-	AWTC01	32	3535	3409	11/18/13	4/17/17	Contig	"CAS Key Laboratory of Microbial Physiological and Metabolic Engineering, Institute of Microbiology, Chinese Academy of Sciences"	SAMN02469411	GCA_000497245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/245/GCA_000497245.1_DSM442V1	24371202	DSM 442
Halanaeroarchaeum sulfurireducens	1604004	PRJNA284332	284332	Euryarchaeota	Halobacteria	2.2535	62.7699	chromosome:NZ_CP011564.1/CP011564.1; plasmid pM27-SA2-01:NZ_CP011565.1/CP011565.1	-	2	2288	2194	10/2/15	3/22/17	Complete Genome	C.N.R. - Institute for Coastal Marine Environment (IAMC)	SAMN03701450	GCA_001305655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/305/655/GCA_001305655.1_ASM130565v1	27182430	M27-SA2
Lactobacillus equi DSM 15833 = JCM 10991	1423740	PRJDB647	243227	Terrabacteria group	Firmicutes	2.24268	39	-	BAMI01	158	2244	1890	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00013881	GCA_000615765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/765/GCA_000615765.1_ASM61576v1	-	JCM 10991
Thermosynechococcus sp. NK55a	1394889	PRJNA218025	218025	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.52006	53.8	chromosome:NC_023033.1/CP006735.1	-	1	2447	2287	12/11/13	4/9/17	Chromosome	PNNL	SAMN02641554	GCA_000505665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/665/GCA_000505665.1_ASM50566v1	24482507	NK55
Helicobacter macacae MIT 99-5501	1357400	PRJNA212677	212677	Proteobacteria	delta/epsilon subdivisions	2.36953	40.6	-	AZJI01	4	2081	2002	12/10/13	4/17/17	Scaffold	Broad Institute	SAMN00690723	GCA_000507845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/507/845/GCA_000507845.1_Heli_maca_MIT_99-5501_V1	25212613	MIT 99-5501
Helicobacter canis NCTC 12740	1357399	PRJNA212678	212678	Proteobacteria	delta/epsilon subdivisions	1.93282	45	-	AZJJ01	1	1842	1757	12/10/13	4/17/17	Scaffold	Broad Institute	SAMN00690727	GCA_000507865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/507/865/GCA_000507865.1_Heli_cani_NCTC_12740_V1	-	NCTC 12740
Geovibrio sp. L21-Ace-BES	1304888	PRJNA195767	195767	Deferribacteres	Deferribacteres	2.97166	48.5	-	ATWF01	4	2738	2686	7/9/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441578	GCA_000421105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/105/GCA_000421105.1_ASM42110v1	-	L21-Ace-BES
Asaia sp. SF2.1	406101	PRJNA219210	219210	Proteobacteria	Alphaproteobacteria	3.52891	59.6	-	AYXS01	51	3297	2822	12/10/13	4/17/17	Scaffold	Duquesne University	SAMN02469759	GCA_000505765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/765/GCA_000505765.1_AsaiaSF2.1v1	24407652	SF2.1
Pelistega sp. MC2	1720297	PRJEB15653	347304	Proteobacteria	Betaproteobacteria	2.54554	38.8	-	FMSW01	8	2413	2293	10/18/16	4/13/17	Scaffold	URMITE	SAMEA4492212	GCA_900099475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/475/GCA_900099475.1_PRJEB15653	-	MC2
Williamsia sp. D3	1313067	PRJNA228956	228956	Terrabacteria group	Actinobacteria	5.62312	64.6	-	AYTE01	50	5323	4833	12/11/13	4/9/17	Contig	Centre for Microbial Ecology and Genomics	SAMN02469444	GCA_000506245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/245/GCA_000506245.1_Williamsia_D3	24459282	D3
Meiothermus silvanus DSM 9946	526227	PRJNA29551	29551	Terrabacteria group	Deinococcus-Thermus	3.72167	62.7494	chromosome:NC_014212.1/CP002042.1; plasmid pMESIL01:NC_014213.1/CP002043.1; plasmid pMESIL02:NC_014214.1/CP002044.1	-	3	3689	3476	5/26/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598469	GCA_000092125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/125/GCA_000092125.1_ASM9212v1	21304690	DSM 9946
Negativicoccus succinicivorans DORA_17_25	1403945	PRJNA221491	221491	Terrabacteria group	Firmicutes	1.50545	48.2	-	AZMC01	356	1679	1679	12/16/13	12/16/13	Contig	"University of California, Berkeley"	SAMN02316559	GCA_000508525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/525/GCA_000508525.1_NS_DORA_17_25_velvet_1.1	-	-
Methylibium sp. CF059	1500261	PRJNA247581	247581	Proteobacteria	Betaproteobacteria	6.84217	65.7	-	JUGM01	38	6284	6080	12/9/14	4/10/17	Scaffold	DOE Joint Genome Institute	SAMN02787123	GCA_000799305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/305/GCA_000799305.1_ASM79930v1	-	CF059
Mesorhizobium loti NZP2037	935546	PRJNA325064	325064	Proteobacteria	Alphaproteobacteria	7.48174	62.7415	chromosome:NZ_CP016079.1/CP016079.1; plasmid pML2037:NZ_CP016080.1/CP016080.1	-	2	7360	7006	6/27/16	4/5/17	Complete Genome	Curtin University	SAMN05217717	GCA_001676765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/765/GCA_001676765.1_ASM167676v1	-	NZP2037
Salinivibrio sp. KP-1	1406902	PRJNA279830	279830	Proteobacteria	Gammaproteobacteria	3.50052	50.5	-	LAQR01	49	3246	3110	4/3/15	4/10/17	Contig	Institute of Microbial Technology	SAMN03450805	GCA_000968645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/645/GCA_000968645.1_ASM96864v1	-	KP-1
Porphyromonas crevioricanis	393921	PRJEB19557	376316	FCB group	Bacteroidetes/Chlorobi group	2.04613	45.3	-	FUXH01	29	1796	1694	3/4/17	3/11/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745203	GCA_900167225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/225/GCA_900167225.1_IMG-taxon_2585428092_annotated_assembly	-	ATCC 55563
Helicobacter fennelliae MRY12-0050	1325130	PRJDB1096	231358	Proteobacteria	delta/epsilon subdivisions	2.15565	37.9	-	BASD01	49	2159	1966	7/3/13	4/9/17	Contig	National Institute of Infectious Diseases	SAMD00036746	GCA_000509365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/509/365/GCA_000509365.1_ASM50936v1	23929465	MRY12-0050
Erythrobacter gangjinensis	502682	PRJNA352100	352100	Proteobacteria	Alphaproteobacteria	2.72495	62.7169	chromosome I:NZ_CP018097.1/CP018097.1; chromosome II:NZ_CP018098.1/CP018098.1	-	2	2676	2598	11/28/16	4/16/17	Complete Genome	"Second Institute of Oceanography, State Oceanic Administration"	SAMN05967050	GCA_001886695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/695/GCA_001886695.1_ASM188669v1	-	CGMCC1.15024
Desulfovibrio magneticus RS-1	573370	PRJDA32105	32105	Proteobacteria	delta/epsilon subdivisions	5.31562	62.7043	chromosome:NC_012796.1/AP010904.1; plasmid pDMC1:NC_012797.1/AP010905.1; plasmid pDMC2:NC_012795.1/AP010906.1	-	3	4612	4486	6/11/09	4/6/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00060954	GCA_000010665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/665/GCA_000010665.1_ASM1066v1	19675025	RS-1
Candidatus Synechococcus spongiarum SH4	1451353	PRJNA238381	238381	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.65871	63.1	-	JENA01	273	1782	1445	3/7/14	4/2/17	Contig	The Hong Kong University of Science and Technology	SAMN02643444	GCA_000586015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/015/GCA_000586015.1_SynSpo.0	24692632	SH4
Arthrobacter sp. YN	2020486	PRJNA393603	393603	Terrabacteria group	Actinobacteria	5.06355	62.7	chromosome:NZ_CP022436.1/CP022436.1	-	1	4673	4387	7/24/17	7/28/17	Complete Genome	Chinese Academy of Sciences	SAMN07337842	GCA_002224285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/285/GCA_002224285.1_ASM222428v1	-	YN
Pseudomonas sp. LPH1	1898684	PRJNA342351	342351	Proteobacteria	Gammaproteobacteria	5.2295	62.7	chromosome:NZ_CP017290.1/CP017290.1	-	1	4806	4613	3/17/17	3/20/17	Complete Genome	Drexel University College of Medicine	SAMN05755917	GCA_002037565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/565/GCA_002037565.1_ASM203756v1	28283521	LPH1
Pseudoalteromonas lipolytica SCSIO 04301	1452721	PRJNA236080	236080	Proteobacteria	Gammaproteobacteria	4.73393	41.3	-	JDVB01	12	4214	4060	2/11/14	4/9/17	Scaffold	South China Sea Institute of Oceanology	SAMN02639474	GCA_000576675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/675/GCA_000576675.1_SOAPdenovo2.04	24744335	SCSIO 04301
Bordetella holmesii	35814	PRJNA287884	287884	Proteobacteria	Betaproteobacteria	3.69438	62.7	chromosome:NZ_CP016341.1/CP016341.1	-	1	3632	3325	8/12/16	4/5/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05333720	GCA_001704215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/215/GCA_001704215.1_ASM170421v1	27795250	H903
Borrelia coriaceae Co53	1313292	PRJNA195595	195595	Spirochaetes	Spirochaetia	1.73048	29.2528	chromosome:NZ_CP005745.1/CP005745.1	-	84	1705	1441	1/27/14	4/9/17	Chromosome	Integrated Genomics	SAMN03081463	GCA_000568755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/755/GCA_000568755.1_ASM56875v1	-	Co53
Pseudomonas chlororaphis	587753	PRJNA312098	312098	Proteobacteria	Gammaproteobacteria	6.83778	62.7	chromosome:NZ_CP014867.1/CP014867.1	-	1	6201	5797	3/30/16	4/5/17	Complete Genome	Agriculture and Agri-Food Canada	SAMN04572923	GCA_001602135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/135/GCA_001602135.1_ASM160213v1	-	-
Bordetella holmesii F627	1266729	PRJNA183011	183011	Proteobacteria	Betaproteobacteria	3.70122	62.7	chromosome:NZ_CP007159.1/CP007159.1	-	1	3639	3332	2/25/16	4/5/17	Complete Genome	CDC	SAMN02951876	GCA_000341465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/465/GCA_000341465.2_ASM34146v2	23516195	F627
Bordetella holmesii H558	1281885	PRJNA186449	186449	Proteobacteria	Betaproteobacteria	3.69643	62.7	chromosome:NZ_CP007158.1/CP007158.1	-	1	3634	3329	2/8/16	4/5/17	Complete Genome	CDC	SAMN02951877	GCA_000341485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/485/GCA_000341485.2_ASM34148v2	23516195	H558
Bifidobacterium actinocoloniiforme DSM 22766	1437605	PRJNA286033	286033	Terrabacteria group	Actinobacteria	1.83006	62.7	chromosome:NZ_CP011786.1/CP011786.1	-	1	1513	1422	8/10/15	4/10/17	Complete Genome	Zhejiang Gongshang University	SAMN02442035	GCA_001263395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/395/GCA_001263395.1_ASM126339v1	26404606	DSM 22766
Staphylococcus cohnii subsp. cohnii	74704	PRJNA279286	279286	Terrabacteria group	Firmicutes	2.82685	32.5	-	LATV01	16	2755	2620	4/15/15	4/3/17	Contig	Universidad Autonoma de Nuevo Leon	SAMN03449104	GCA_000972575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/575/GCA_000972575.1_ASM97257v1	-	532
[Scytonema hofmanni] UTEX 2349	1469607	PRJNA63425	63425	Terrabacteria group	Cyanobacteria/Melainabacteria group	8.13344	41.2	-	ALWD01	15	7173	6662	2/27/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN00203911	GCA_000582685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/685/GCA_000582685.1_ASM58268v1	-	UTEX 2349
Marinimicrobia bacterium JGI OTU-1	1379401	PRJNA213460	213460	FCB group	Candidatus Marinimicrobia	2.3571	47.2	-	AWNO01	101	-	-	10/31/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441757	GCA_000494065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/065/GCA_000494065.1_Marinimicrobia_bacterium_OTU_1	23851394	JGI OTU-1
Marinimicrobia bacterium JGI OTU-2	1379406	PRJNA213461	213461	FCB group	Candidatus Marinimicrobia	1.11901	32.6	-	AWNN01	41	-	-	10/31/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441776	GCA_000494305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/305/GCA_000494305.1_Marinimicrobia_bacterium_OTU_2	23851394	JGI OTU-2
Marinimicrobia bacterium SCGC AAA011-A05	1047009	PRJNA192344	192344	FCB group	Candidatus Marinimicrobia	0.237314	48.2	-	ASLB01	10	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440525	GCA_000398105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/105/GCA_000398105.1_ASM39810v1	23851394	SCGC AAA011-A05
Aquamicrobium defluvii	69279	PRJNA238382	238382	Proteobacteria	Alphaproteobacteria	4.77459	63.1	-	JENY01	59	4699	4455	3/5/14	4/17/17	Scaffold	Tianjin University	SAMN02643445	GCA_000585625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/625/GCA_000585625.1_Aqudef_v9	26316640	W13Z1
Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456	500634	PRJDB56	279560	Terrabacteria group	Actinobacteria	2.21104	62.7	chromosome:NZ_AP012323.1/AP012323.1	-	1	1885	1723	3/24/15	4/3/17	Complete Genome	"Graduate School of Frontier Sciences, University of Tokyo"	SAMD00061040	GCA_001025135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/135/GCA_001025135.1_ASM102513v1	-	JCM 1255
Brachybacterium phenoliresistens	396014	PRJNA238155	238155	Terrabacteria group	Actinobacteria	4.18816	73.2	-	JDYK01	35	3749	3609	2/21/14	4/17/17	Scaffold	Tianjin University	SAMN02639400	GCA_000576425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/425/GCA_000576425.1_Braphev1	25237019	W13A50
Zhouia amylolytica	376730	PRJEB17546	352027	FCB group	Bacteroidetes/Chlorobi group	3.89227	36.7	-	FPAG01	17	3348	3269	11/2/16	4/14/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487906	GCA_900116365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/365/GCA_900116365.1_IMG-taxon_2619618939_annotated_assembly	-	CGMCC 1.6114
Bordetella holmesii 44057	1172205	PRJNA178408	178408	Proteobacteria	Betaproteobacteria	3.69714	62.7	chromosome:NZ_CP007495.1/CP007495.1	-	1	3638	3044	10/10/14	4/2/17	Complete Genome	Institute for Genome Sciences	SAMN02190089	GCA_000765395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/395/GCA_000765395.1_ASM76539v1	-	44057
Bordetella holmesii ATCC 51541	1247649	PRJNA178410	178410	Proteobacteria	Betaproteobacteria	3.69967	62.7	chromosome:NZ_CP007494.1/CP007494.1	-	1	3643	3004	4/4/14	4/2/17	Complete Genome	Institute for Genome Sciences	SAMN02189846	GCA_000612485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/485/GCA_000612485.1_ASM61248v1	-	ATCC 51541
Spiribacter salinus M19-40	1260251	PRJNA179191	179191	Proteobacteria	Gammaproteobacteria	1.73949	62.7	chromosome:NC_021291.1/CP005963.1	-	1	1735	1669	5/24/13	4/8/17	Complete Genome	"Evolutionary Genomics Group, Universidad Miguel Hernandez, San Juan de Alicante, Spain"	SAMN02603230	GCA_000319575.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/575/GCA_000319575.2_ASM31957v2	23409269	M19-40
Pseudomonas stutzeri CCUG 29243	1196835	PRJNA167996	167996	Proteobacteria	Gammaproteobacteria	4.70906	62.7	chromosome:NC_018028.1/CP003677.1	-	1	4417	4248	6/13/12	5/19/17	Complete Genome	MICROGEN: Microbial Comparative Genomics	SAMN02603608	GCA_000267545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/545/GCA_000267545.1_ASM26754v1	23144395	CCUG 29243
Dasania marina DSM 21967	1121374	PRJNA169739	169739	Proteobacteria	Gammaproteobacteria	4.10499	47.4	-	ARDZ01	18	3702	3611	4/19/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440427	GCA_000373485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/485/GCA_000373485.1_ASM37348v1	-	DSM 21967
Gallaecimonas xiamenensis 3-C-1	745411	PRJNA170514	170514	Proteobacteria	Gammaproteobacteria	4.06228	60.6	-	AMRI01	66	3877	3773	9/27/12	4/17/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02471169	GCA_000299915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/915/GCA_000299915.1_ASM29991v1	23209203	3-C-1
Candidatus Microthrix parvicella RN1	1229780	PRJEB410	203009	Terrabacteria group	Actinobacteria	4.2115	66.3	-	CANL01	1	3938	3766	5/13/13	4/8/17	Scaffold	"Department of Biotechnology, Chemistry and Environmental Engineering, Aalborg University"	SAMEA2272438	GCA_000455525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/525/GCA_000455525.1_M.parvicella.RN1	23446830	RN1
Bifidobacterium bifidum PRL2010	702459	PRJNA42863	42863	Terrabacteria group	Actinobacteria	2.21466	62.7	chromosome:NC_014638.1/CP001840.1	-	1	1791	1706	11/2/10	8/3/16	Complete Genome	"Laboratory of Probiogenomics, Department of genetics, university of Parma, Italy"	SAMN02603510	GCA_000165905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/165/905/GCA_000165905.1_ASM16590v1	20974960	PRL2010
Elioraea tepidiphila DSM 17972	1121861	PRJNA182402	182402	Proteobacteria	Alphaproteobacteria	4.30424	71.3	-	ARKI01	56	4114	3963	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441332	GCA_000378465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/465/GCA_000378465.1_ASM37846v1	-	DSM 17972
Spongiibacter tropicus DSM 19543	1123279	PRJNA185370	185370	Proteobacteria	Gammaproteobacteria	3.94734	57.3	-	ATUS01	7	3710	3640	7/9/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440570	GCA_000420325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/325/GCA_000420325.1_ASM42032v1	-	DSM 19543
Faecalicoccus pleomorphus DSM 20574	1123313	PRJNA185372	185372	Terrabacteria group	Firmicutes	1.99264	39	-	ATUT01	47	2042	1915	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02440905	GCA_000420345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/345/GCA_000420345.1_ASM42034v1	-	DSM 20574
Maricaulis maris MCS10	394221	PRJNA17333	17333	Proteobacteria	Alphaproteobacteria	3.36878	62.7	chromosome:NC_008347.1/CP000449.1	-	1	3172	3099	9/14/06	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02598382	GCA_000014745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/745/GCA_000014745.1_ASM1474v1	-	MCS10
Chloroflexi bacterium oral taxon 439 isolate Chl1-2	1311576	PRJNA194443	194443	Terrabacteria group	Chloroflexi	1.7667	53.7	-	APVK01	242	-	-	6/4/13	7/29/15	Contig	Oak Ridge National Laboratory	SAMN02470756	GCA_000406785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/785/GCA_000406785.1_Chl1-2	24738594	-
Osedax symbiont Rs1	1330036	PRJNA191058	191058	Proteobacteria	Gammaproteobacteria	4.50525	43.4	-	ASZJ01	226	4489	4420	6/27/13	1/8/14	Contig	Korea University	SAMN02470760	GCA_000416275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/275/GCA_000416275.1_ASM41627v1	-	-
Osedax symbiont Rs2	1330035	PRJNA191057	191057	Proteobacteria	Gammaproteobacteria	4.64984	45.2	-	ASZI01	411	4533	4523	6/27/13	1/8/14	Contig	Korea University	SAMN02470759	GCA_000416315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/315/GCA_000416315.1_ASM41631v1	-	-
beta proteobacterium JGI 0001003-N18	1094972	PRJNA176046	176046	Proteobacteria	Betaproteobacteria	0.150727	60.9	-	ATTT01	41	-	-	7/9/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440562	GCA_000419825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/825/GCA_000419825.1_ASM41982v1	-	JGI 0001003-N18
Lachnospiraceae bacterium NK4A136	877420	PRJNA185705	185705	Terrabacteria group	Firmicutes	2.73003	36.9	-	ATVW01	78	2515	2408	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440911	GCA_000420925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/925/GCA_000420925.1_ASM42092v1	-	NK4A136
Clostridiales bacterium NK3B98	877414	PRJNA185711	185711	Terrabacteria group	Firmicutes	3.04098	54.9	-	ATWA01	211	2750	2569	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441577	GCA_000421005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/005/GCA_000421005.1_ASM42100v1	-	NK3B98
Lachnospiraceae bacterium NK4A179	877424	PRJNA185714	185714	Terrabacteria group	Firmicutes	3.22286	43.3	-	ATWC01	73	2955	2834	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440898	GCA_000421045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/045/GCA_000421045.1_ASM42104v1	-	NK4A179
Acidobacteriaceae bacterium TAA166	278963	PRJNA190839	190839	Acidobacteria	Acidobacteriia	6.13693	58.8	-	ATWD01	3	5216	5048	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440899	GCA_000421065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/065/GCA_000421065.1_ASM42106v1	-	TAA 166
alpha proteobacterium SCGC AAA536-K22	1009709	PRJNA200604	200604	Proteobacteria	Alphaproteobacteria	1.99518	31	-	ATWQ01	92	-	-	7/9/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441242	GCA_000421325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/325/GCA_000421325.1_ASM42132v1	-	SCGC AAA536-K22
Proteobacteria bacterium JGI 0000113-P07	1245603	PRJNA177749	177749	Proteobacteria	unclassified Proteobacteria	5.69415	36.4	-	AUSD01	576	-	-	7/17/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02440705	GCA_000438945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/945/GCA_000438945.1_ASM43894v1	-	JGI 0000113-P07
actinobacterium SCGC AAA028-I14	938457	PRJNA177873	177873	Terrabacteria group	Actinobacteria	0.628184	44.9	-	AUSE02	54	-	-	7/17/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441458	GCA_000438965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/965/GCA_000438965.2_ASM43896v2	-	SCGC AAA028-I14
Bacteroidetes bacterium SCGC AAA027-G08	938698	PRJNA177881	177881	FCB group	Bacteroidetes/Chlorobi group	1.44203	35.7	-	AUSF01	59	-	-	7/17/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02440706	GCA_000438985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/985/GCA_000438985.1_ASM43898v1	-	SCGC AAA027-G08
Bacteroidetes bacterium SCGC AAA027-N21	938709	PRJNA178045	178045	FCB group	Bacteroidetes/Chlorobi group	2.30658	33.2	-	AUSH02	73	-	-	7/17/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02440794	GCA_000439025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/025/GCA_000439025.2_ASM43902v2	-	SCGC AAA027-N21
Dielma fastidiosa	1034346	PRJEA70545	70545	Terrabacteria group	Firmicutes	3.61503	40.1	-	CAEN01	95	3479	3360	10/19/12	4/17/17	Scaffold	laboratoire URMITE CNRS 6236	SAMEA2272058	GCA_000313565.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/565/GCA_000313565.2_ASM31356v2	-	JC13
Fenollaria massiliensis	938288	PRJEB76	169896	Terrabacteria group	Firmicutes	1.70968	34.5	-	CALI02	7	1671	1579	7/31/12	4/17/17	Scaffold	URMITE	SAMEA2272216	GCA_000312505.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/505/GCA_000312505.3_Cb_9401234	25197455	9401234
Desulfonauticus sp. A7A	1379281	PRJNA210020	210020	Proteobacteria	delta/epsilon subdivisions	1.89594	38.3	-	AVAG01	115	-	-	8/9/13	8/9/13	Contig	CSIRO	SAMN02212367	GCA_000445205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/205/GCA_000445205.1_Desulfonauticus_sp.	-	-
Tatumella sp. UCD-D_suzukii	1408192	PRJNA239904	239904	Proteobacteria	Gammaproteobacteria	3.59725	51.5	-	JFJX01	71	3463	3275	3/31/14	4/17/17	Contig	UC Davis	SAMN02673104	GCA_000611875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/875/GCA_000611875.2_a5_miseq_macOS_20140113	24762940	UCD-D_suzukii
Paraburkholderia xenovorans LB400	266265	PRJNA254	254	Proteobacteria	Betaproteobacteria	9.73114	62.6336	chromosome 1:NC_007951.1/CP000270.1; chromosome 2:NC_007952.1/CP000271.1; chromosome 3:NC_007953.1/CP000272.1	-	3	8841	8421	4/10/06	8/28/17	Complete Genome	DOE Joint Genome Institute	SAMN02598451	GCA_000013645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/645/GCA_000013645.1_ASM1364v1	17030797	LB400
Erwinia mallotivora	69222	PRJNA238419	238419	Proteobacteria	Gammaproteobacteria	4.64007	52.4	-	JFHN01	75	4297	4031	3/13/14	4/17/17	Contig	MARDI	SAMN02666699	GCA_000590885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/885/GCA_000590885.1_MSR-CA7.0	24812220	BT-MARDI
Arenitalea lutea	1178825	PRJNA170902	170902	FCB group	Bacteroidetes/Chlorobi group	3.38485	33.3	-	ALIH01	51	2982	2902	7/30/12	4/7/17	Contig	Shandong University	SAMN02470927	GCA_000283015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/015/GCA_000283015.1_P735.v1.0	23144387	P7-3-5
haloarchaeon 3A1_DGR	1071085	PRJNA183189	183189	Euryarchaeota	Halobacteria	2.8809	67.7	-	ATCR02	3	2816	2714	8/19/13	4/9/17	Scaffold	Directorate of Groundnut Research (Indian Council of Agricultural Research)	SAMN02469738	GCA_000447865.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/865/GCA_000447865.2_ASM44786v2	25320448	3A1_DGR
Candidatus Stoquefichus massiliensis AP9	1211844	PRJEB377	172623	Terrabacteria group	Firmicutes	3.50987	30.9	-	CBLM01	24	3501	3254	6/10/13	4/8/17	Scaffold	URMITE	SAMEA2272696	GCA_000455285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/285/GCA_000455285.1_Sm_AP9	-	AP9
Gorillibacterium massiliense	1280390	PRJEB4162	208657	Terrabacteria group	Firmicutes	5.54643	50.4	-	CBQR02	189	5137	4814	8/7/13	4/9/17	Contig	URMITE	SAMEA2272737	GCA_000455485.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/485/GCA_000455485.2_G5	-	G5
Siccibacter turicensis LMG 23730	1388748	PRJNA215386	215386	Proteobacteria	Gammaproteobacteria	4.23673	57.8	-	AWFZ01	74	4024	3867	8/30/13	4/16/17	Scaffold	"Nottingham Trent University, UK"	SAMN02318531	GCA_000463155.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/155/GCA_000463155.2_CroZurLMG23730T_1.0	24072872	LMG 23730
Marinimicrobium sp. LS-A18	1381596	PRJNA214184	214184	Proteobacteria	Gammaproteobacteria	3.81511	59	-	AWEP01	14	3250	3180	9/3/13	4/8/17	Contig	Qingdao Agricultural University	SAMN02470819	GCA_000463525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/525/GCA_000463525.1_SOAPdenovo	24092780	LS-A18
Acidobacteria bacterium JGI 0001001-H03	1235986	PRJNA176045	176045	Acidobacteria	unclassified Acidobacteria	0.789133	52.9	-	AUNQ01	157	-	-	7/16/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441467	GCA_000463775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/775/GCA_000463775.1_ASM46377v1	-	JGI 0001001-H03
Comamonadaceae bacterium JGI 0001003-E14	1094956	PRJNA176054	176054	Proteobacteria	Betaproteobacteria	0.113075	54.1	-	AUNV01	52	-	-	7/16/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441469	GCA_000463875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/875/GCA_000463875.1_ASM46387v1	-	JGI 0001003-E14
Xanthomonadaceae bacterium JGI 0001002-D18	1094967	PRJNA176080	176080	Proteobacteria	Gammaproteobacteria	0.112613	60	-	AUOR01	39	-	-	7/16/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440799	GCA_000464315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/315/GCA_000464315.1_ASM46431v1	-	JGI 0001002-D18
halophilic archaeon J07HX5	1325472	PRJNA176231	176231	Euryarchaeota	Halobacteria	2.04094	59.2	-	ARPW01	1	2158	2128	6/26/13	9/4/13	Scaffold	"University of California, San Diego, Scripps Institution of Oceanography"	SAMN01940911	GCA_000415945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/945/GCA_000415945.1_HX64_HX5_0315125.1	23637883	-
halophilic archaeon J07HX64	1085028	PRJNA70851	70851	Euryarchaeota	Halobacteria	2.98294	62.8	-	AGCY01	1	3070	3026	6/26/13	9/4/13	Scaffold	University of California San Diego	SAMN01940911	GCA_000416085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/085/GCA_000416085.1_J07ABselected	23637883	-
halophilic archaeon J07HB67	1085029	PRJNA70861	70861	Euryarchaeota	Halobacteria	2.64955	64	-	AGCZ01	3	2874	2833	6/26/13	9/4/13	Scaffold	University of California San Diego	SAMN01940911	GCA_000416105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/105/GCA_000416105.1_J07AB_HB67select	23637883	-
Proteocatella sphenisci DSM 23131	1123009	PRJNA185650	185650	Terrabacteria group	Firmicutes	2.41106	36.5	-	AUID01	45	2332	2223	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440660	GCA_000423525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/525/GCA_000423525.1_ASM42352v1	-	DSM 23131
Lachnospiraceae bacterium NK4A144	877421	PRJNA185712	185712	Terrabacteria group	Firmicutes	4.09288	41.6	-	AUJT01	68	3630	3475	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440673	GCA_000424365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/365/GCA_000424365.1_ASM42436v1	-	NK4A144
Comamonadaceae bacterium URHA0028	1298913	PRJNA190842	190842	Proteobacteria	Betaproteobacteria	4.90412	68	-	AUET01	14	4659	4561	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441185	GCA_000426125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/125/GCA_000426125.1_ASM42612v1	-	URHA0028
Sedimenticola selenatireducens DSM 17993	1111735	PRJNA165429	165429	Proteobacteria	Gammaproteobacteria	4.58853	56.6	-	ATZE01	37	4278	4148	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440603	GCA_000428045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/045/GCA_000428045.1_ASM42804v1	-	DSM 17993
Proteobacteria bacterium JGI 0000113-E04	1245601	PRJNA177747	177747	Proteobacteria	unclassified Proteobacteria	6.87819	42.4	-	ATZM01	865	-	-	7/15/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02440604	GCA_000428205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/205/GCA_000428205.1_ASM42820v1	-	JGI 0000113-E04
Proteobacteria bacterium JGI 0000113-L05	1245607	PRJNA177750	177750	Proteobacteria	unclassified Proteobacteria	1.65308	35.2	-	ATZN01	179	-	-	7/15/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441567	GCA_000428225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/225/GCA_000428225.1_ASM42822v1	-	JGI 0000113-L05
beta proteobacterium SCGC AAA024-K11	938763	PRJNA177874	177874	Proteobacteria	Betaproteobacteria	0.149624	51	-	ATZO01	67	-	-	7/15/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02440605	GCA_000428245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/245/GCA_000428245.1_ASM42824v1	-	SCGC AAA024-K11
actinobacterium SCGC AAA027-D23	938429	PRJNA177875	177875	Terrabacteria group	Actinobacteria	1.09139	47.7	-	ATZP02	82	-	-	7/15/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02440883	GCA_000428265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/265/GCA_000428265.2_ASM42826v2	-	SCGC AAA027-D23
beta proteobacterium SCGC AAA027-K21	938785	PRJNA177876	177876	Proteobacteria	Betaproteobacteria	2.25637	50.9	-	ATZQ02	116	-	-	7/15/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441214	GCA_000428285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/285/GCA_000428285.2_ASM42828v2	-	SCGC AAA027-K21
Verrucomicrobia bacterium SCGC AAA027-I19	939126	PRJNA177877	177877	PVC group	Verrucomicrobia	2.72483	51.7	-	ATZR02	173	-	-	7/15/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441552	GCA_000428305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/305/GCA_000428305.2_ASM42830v2	-	SCGC AAA027-I19
beta proteobacterium SCGC AAA027-I06	938781	PRJNA177878	177878	Proteobacteria	Betaproteobacteria	1.61364	50.9	-	ATZS02	132	-	-	7/15/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441215	GCA_000428325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/325/GCA_000428325.2_ASM42832v2	-	SCGC AAA027-I06
actinobacterium SCGC AAA028-N15	938467	PRJNA177879	177879	Terrabacteria group	Actinobacteria	0.946132	38.7	-	ATZT02	68	-	-	7/15/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02440606	GCA_000428345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/345/GCA_000428345.2_ASM42834v2	-	SCGC AAA028-N15
beta proteobacterium SCGC AAA028-K02	938797	PRJNA177880	177880	Proteobacteria	Betaproteobacteria	0.729926	39.2	-	ATZU02	71	-	-	7/15/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441553	GCA_000428365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/365/GCA_000428365.2_ASM42836v2	-	SCGC AAA028-K02
beta proteobacterium SCGC AAA027-C02	938772	PRJNA179457	179457	Proteobacteria	Betaproteobacteria	1.29754	43.7	-	ATZV01	63	-	-	7/15/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441554	GCA_000428385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/385/GCA_000428385.1_ASM42838v1	-	SCGC AAA027-C02
Firmicutes bacterium JGI 0000119-C08	1259808	PRJNA179474	179474	Terrabacteria group	Firmicutes	0.301848	52	-	ATZX01	35	-	-	7/15/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02440886	GCA_000428425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/425/GCA_000428425.1_ASM42842v1	-	JGI 0000119-C08
Proteobacteria bacterium JGI 0000113-D06	1259809	PRJNA179475	179475	Proteobacteria	unclassified Proteobacteria	0.604773	33.4	-	ATZY01	65	-	-	7/15/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441555	GCA_000428445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/445/GCA_000428445.1_ASM42844v1	-	JGI 0000113-D06
Firmicutes bacterium JGI 0000119-P10	1265501	PRJNA182429	182429	Terrabacteria group	Firmicutes	0.307136	54.2	-	AUAD01	52	-	-	7/15/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441556	GCA_000428545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/545/GCA_000428545.1_ASM42854v1	-	JGI 0000119-P10
Dehalococcoidia bacterium SCGC AB-539-J10	1318599	PRJNA196991	196991	Terrabacteria group	Chloroflexi	1.43549	47.3	-	ARPL01	614	-	-	9/5/13	1/8/14	Contig	Helmholtz Centre for Environmental Research	SAMN02469886	GCA_000464595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/595/GCA_000464595.1_DEHJ10_Sequencher	23966099	SCGC AB-539-J10
Planktothrix mougeotii NIVA-CYA 405	545630	PRJNA212886	212886	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.49912	39.5	-	AVFU01	8	4902	4596	9/6/13	4/17/17	Scaffold	University of Oslo	SAMN02261501	GCA_000464745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/745/GCA_000464745.1_NC405_1	23995927	NIVA-CYA 405
Thaumarchaeota archaeon SCGC AB-539-E09	1198115	PRJNA168252	168252	TACK group	Thaumarchaeota	0.529171	43.3	-	ALXK01	87	658	650	3/28/13	7/28/15	Contig	Max Plank Institute for Marine Microbiology	SAMN02261086	GCA_000349625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/625/GCA_000349625.1_GATC	23535597	-
Thermoplasmatales archaeon SCGC AB-539-N05	1198116	PRJNA168253	168253	Euryarchaeota	Thermoplasmata	0.801028	36.5	-	ALXL01	99	875	852	3/28/13	7/28/15	Contig	Max Plank Institute for Marine Microbiology	SAMN02261087	GCA_000349645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/645/GCA_000349645.1_GATC	23535597	-
Thermoplasmatales archaeon SCGC AB-540-F20	1242866	PRJNA177372	177372	Euryarchaeota	Thermoplasmata	1.03725	35.6	-	AOSI01	172	1268	1255	3/28/13	7/28/15	Contig	"Center for Geomicorbiology, Aarhus University"	SAMN02261089	GCA_000349685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/685/GCA_000349685.1_GATC	23535597	-
cyanobacterium PCC 7702	1173021	PRJNA158823	158823	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.90315	42.5	-	ALWA01	4	4276	3963	1/18/13	5/19/17	Scaffold	JGI	SAMN02261344	GCA_000332255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/255/GCA_000332255.1_ASM33225v1	23277585	PCC 7702
Enterobacteriaceae bacterium LSJC7	1224136	PRJNA172943	172943	Proteobacteria	Gammaproteobacteria	4.61689	54.8	-	AMFN01	34	4320	4166	10/4/12	5/18/17	Contig	"Institute of Urban Environment, Chinese Academy of Sciences"	SAMN02470049	GCA_000302695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/695/GCA_000302695.1_LSJC7_1.0	23209248	LSJC7
gamma proteobacterium WG36	1229485	PRJNA174214	174214	Proteobacteria	Gammaproteobacteria	5.16204	52.8	-	AMYV01	274	4886	4539	2/1/13	5/19/17	Contig	University of Notre Dame	SAMN02471193	GCA_000335795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/795/GCA_000335795.1_WG36.1.0	-	WG36
alpha proteobacterium LLX12A	1229484	PRJNA174212	174212	Proteobacteria	Alphaproteobacteria	5.9611	64.2	-	AMYX01	289	5775	5420	2/1/13	5/19/17	Contig	University of Notre Dame	SAMN02471196	GCA_000335755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/755/GCA_000335755.1_LLX12A.1.0	-	LLX12A
alpha proteobacterium L41A	1229204	PRJNA174163	174163	Proteobacteria	Alphaproteobacteria	3.1107	66.4	-	AMYY01	67	3063	2973	2/1/13	4/8/17	Contig	University of Notre Dame	SAMN02471197	GCA_000335735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/735/GCA_000335735.1_L41A.1.0	-	L41A
beta proteobacterium L13	1229489	PRJNA174218	174218	Proteobacteria	Betaproteobacteria	3.76537	61.3	-	AMYZ01	49	3561	3445	2/1/13	4/8/17	Contig	University of Notre Dame	SAMN02471194	GCA_000335715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/715/GCA_000335715.1_L13.1.0	-	L13
beta proteobacterium FWI2	1229488	PRJNA174217	174217	Proteobacteria	Betaproteobacteria	7.33421	63.5	-	AMZA01	1459	-	-	2/1/13	1/8/14	Contig	University of Notre Dame	SAMN02471200	GCA_000335695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/695/GCA_000335695.1_FWI2.1.0	-	FWI2
Candidatus Caldatribacterium saccharofermentans OP9-77CS	1262132	PRJNA179321	179321	unclassified Bacteria	Bacteria candidate phyla	2.25236	55.8	-	APCU01	306	-	-	3/19/13	1/8/14	Contig	"University of Nevada, Las Vegas"	SAMN02471906	GCA_000347575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/575/GCA_000347575.1_77CS_OP9_bin	-	-
Candidatus Caldatribacterium californiense OP9-cSCG	1262133	PRJNA178520	178520	unclassified Bacteria	Bacteria candidate phyla	2.08053	55.5	-	APKF01	470	-	-	4/5/13	7/29/15	Contig	"University of Nevada, Las Vegas"	SAMN01797434	GCA_000353875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/875/GCA_000353875.1__Ca._Caldatribacterium_californiense_	-	-
crenarchaeote SCGC AAA261-C22	1130299	PRJNA165469	165469	TACK group	Crenarchaeota	0.775531	32.8	-	AQVF01	193	-	-	4/19/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02256501	GCA_000371945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/945/GCA_000371945.1_ASM37194v1	-	SCGC AAA261-C22
crenarchaeote SCGC AAA261-F05	1130300	PRJNA165471	165471	TACK group	Crenarchaeota	0.716004	32.4	-	AQVG01	179	-	-	4/20/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02256487	GCA_000375565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/565/GCA_000375565.1_ASM37556v1	-	SCGC AAA261-F05
crenarchaeote SCGC AAA261-G18	1130301	PRJNA165473	165473	TACK group	Crenarchaeota	0.523162	32.1	-	AQVH01	137	-	-	4/20/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02256485	GCA_000375605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/605/GCA_000375605.1_ASM37560v1	-	SCGC AAA261-G18
crenarchaeote SCGC AAA261-L14	1130302	PRJNA165475	165475	TACK group	Crenarchaeota	0.593616	33.4	-	AQVI01	108	-	-	4/19/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02256489	GCA_000372145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/145/GCA_000372145.1_ASM37214v1	-	SCGC AAA261-L14
crenarchaeote SCGC AAA261-N13	1130304	PRJNA165477	165477	TACK group	Crenarchaeota	0.758618	32.3	-	AQVJ01	147	-	-	4/20/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02256482	GCA_000376005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/005/GCA_000376005.1_ASM37600v1	-	SCGC AAA261-N13
euryarchaeote SCGC AAA261-E04	1130317	PRJNA165491	165491	Euryarchaeota	unclassified Euryarchaeota	0.75864	36.8	-	AQVK01	148	-	-	4/20/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02256486	GCA_000375985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/985/GCA_000375985.1_ASM37598v1	-	SCGC AAA261-E04
euryarchaeote SCGC AAA261-G15	1130318	PRJNA165493	165493	Euryarchaeota	unclassified Euryarchaeota	0.965738	38.7	-	AQVL01	240	-	-	4/20/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02256483	GCA_000376025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/025/GCA_000376025.1_ASM37602v1	-	SCGC AAA261-G15
alpha proteobacterium SCGC AB-629-F11	1131277	PRJNA165509	165509	Proteobacteria	Alphaproteobacteria	2.13974	29.3	-	AQVN01	278	-	-	4/20/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02256475	GCA_000376085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/085/GCA_000376085.1_ASM37608v1	-	SCGC AB-629-F11
alpha proteobacterium SCGC AB-629-G21	1131276	PRJNA165511	165511	Proteobacteria	Alphaproteobacteria	1.54943	31.4	-	AQVO01	208	-	-	4/20/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02256472	GCA_000376065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/065/GCA_000376065.1_ASM37606v1	-	SCGC AB-629-G21
crenarchaeote SCGC AAA261-L22	1130303	PRJNA165543	165543	TACK group	Crenarchaeota	0.467463	32.4	-	AQVP01	141	-	-	4/20/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02256478	GCA_000375665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/665/GCA_000375665.1_ASM37566v1	-	SCGC AAA261-L22
crenarchaeote SCGC AAA261-N23	1130305	PRJNA165545	165545	TACK group	Crenarchaeota	1.20389	32	-	AQVQ01	176	-	-	4/20/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02256477	GCA_000375685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/685/GCA_000375685.1_ASM37568v1	-	SCGC AAA261-N23
gamma proteobacterium SCGC AB-629-K02	1131275	PRJNA165557	165557	Proteobacteria	Gammaproteobacteria	1.05449	46.9	-	AQVR01	282	-	-	4/20/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02256474	GCA_000376165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/165/GCA_000376165.1_ASM37616v1	-	SCGC AB-629-K02
Oxalobacteraceae bacterium JGI 0001004-K23	1157679	PRJNA169694	169694	Proteobacteria	Betaproteobacteria	2.57348	63.5	-	AQWD01	216	-	-	4/20/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441398	GCA_000375965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/965/GCA_000375965.1_ASM37596v1	-	JGI 0001004-K23
Oxalobacteraceae bacterium JGI 0001004-J12	1157678	PRJNA169695	169695	Proteobacteria	Betaproteobacteria	0.301938	64.3	-	AQWE01	69	-	-	4/20/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440405	GCA_000375845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/845/GCA_000375845.1_ASM37584v1	-	JGI 0001004-J12
bacterium UW 659-2-F09	1207071	PRJNA170086	170086	unclassified Bacteria	unclassified Bacteria (miscellaneous)	0.427235	56.7	-	AQXJ01	134	-	-	4/20/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440414	GCA_000376465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/465/GCA_000376465.1_ASM37646v1	-	UW 659-2-F09
Aigarchaeota archaeon SCGC AAA471-A16	1052823	PRJNA192281	192281	TACK group	Thaumarchaeota	0.62462	60.4	-	AQYL01	49	-	-	4/23/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441044	GCA_000380685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/685/GCA_000380685.1_ASM38068v1	23851394	SCGC AAA471-A16
Fervidibacteria bacterium SCGC AAA471-D06	1052808	PRJNA192286	192286	unclassified Bacteria	Bacteria candidate phyla	2.09435	50.8	-	AQYN01	279	-	-	4/23/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441045	GCA_000380725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/725/GCA_000380725.1_ASM38072v1	23851394	SCGC AAA471-D06
Cloacimonetes bacterium JGI 0000039-A21	1047069	PRJNA192290	192290	FCB group	Candidatus Cloacimonetes	0.633964	37.5	-	AQYO01	67	-	-	4/23/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441046	GCA_000380745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/745/GCA_000380745.1_ASM38074v1	23851394	JGI 0000039-A21
Cloacimonetes bacterium JGI 0000039-G13	1047070	PRJNA192293	192293	FCB group	Candidatus Cloacimonetes	1.88508	37.8	-	AQYP01	132	-	-	4/23/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440422	GCA_000380765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/765/GCA_000380765.1_ASM38076v1	23851394	JGI 0000039-G13
Hydrogenedentes bacterium JGI 0000039-J10	1046982	PRJNA192295	192295	FCB group	Candidatus Hydrogenedentes	2.92405	36.9	-	AQYQ01	120	-	-	4/23/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441727	GCA_000380785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/785/GCA_000380785.1_ASM38078v1	23851394	JGI 0000039-J10
Cloacimonetes bacterium JGI 0000039-P09	1047077	PRJNA192315	192315	FCB group	Candidatus Cloacimonetes	0.289645	39.6	-	AQYR01	22	-	-	4/23/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441728	GCA_000380805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/805/GCA_000380805.1_ASM38080v1	23851394	JGI 0000039-P09
Candidatus Microgenomatus auricola SCGC AAA011-E14	1047003	PRJNA192345	192345	unclassified Bacteria	Bacteria candidate phyla	0.508619	34.9	-	AQYS01	16	-	-	4/23/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441729	GCA_000380825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/825/GCA_000380825.1_ASM38082v1	23851394	SCGC AAA011-E14
Parcubacteria bacterium SCGC AAA011-A08	1046985	PRJNA192356	192356	unclassified Bacteria	Bacteria candidate phyla	0.388659	37.5	-	AQYT01	28	-	-	4/23/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441047	GCA_000380845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/845/GCA_000380845.1_ASM38084v1	23851394	SCGC AAA011-A08
Candidatus Aenigmarchaeota archaeon SCGC AAA011-F07	1046938	PRJNA192357	192357	DPANN group	Candidatus Aenigmarchaeota	0.248182	53.5	-	AQYU01	18	-	-	4/23/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441388	GCA_000380865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/865/GCA_000380865.1_ASM38086v1	23851394	SCGC AAA011-F07
Parcubacteria bacterium SCGC AAA011-J21	1046989	PRJNA192359	192359	unclassified Bacteria	Bacteria candidate phyla	0.505716	43.2	-	AQYV01	30	-	-	4/23/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440423	GCA_000380885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/885/GCA_000380885.1_ASM38088v1	23851394	SCGC AAA011-J21
Nanoarchaeota archaeon SCGC AAA011-L22	1046946	PRJNA192360	192360	DPANN group	Nanoarchaeota	1.16224	32	-	AQYW01	81	-	-	4/23/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440424	GCA_000380905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/905/GCA_000380905.1_ASM38090v1	23851394	SCGC AAA011-L22
Atribacteria bacterium SCGC AAA252-M02	913317	PRJNA192398	192398	unclassified Bacteria	Bacteria candidate phyla	2.19691	34.6	-	AQYX01	183	-	-	4/23/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441048	GCA_000380925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/925/GCA_000380925.1_ASM38092v1	23851394	SCGC AAA252-M02
filamentous cyanobacterium ESFC-1	1128427	PRJNA165547	165547	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.63204	46.5	-	ARCP01	3	5021	4809	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02256433	GCA_000380225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/225/GCA_000380225.1_ASM38022v1	23908279	ESFC-1
gamma proteobacterium SCGC AB-629-P17	1131274	PRJNA165559	165559	Proteobacteria	Gammaproteobacteria	1.42409	38.9	-	ARCQ01	70	-	-	4/19/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02256432	GCA_000372785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/785/GCA_000372785.1_ASM37278v1	-	SCGC AB-629-P17
Xanthobacteraceae bacterium 501b	1168059	PRJNA179465	179465	Proteobacteria	Alphaproteobacteria	5.10863	67.4	-	ARJL01	2	4677	4521	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441340	GCA_000378025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/025/GCA_000378025.1_ASM37802v1	-	501b
Cytophagales bacterium B6	100480	PRJDA69953	69953	FCB group	Bacteroidetes/Chlorobi group	5.39177	44.2	-	BACV01	1131	5174	4213	12/26/12	5/18/17	Scaffold	Kazusa DNA Research Institute	SAMD00036566	GCA_000333295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/295/GCA_000333295.1_ASM33329v1	-	B6
Sphingomonas-like bacterium B12	95606	PRJDA69957	69957	Proteobacteria	Alphaproteobacteria	4.87867	65.9	-	BACX01	886	5132	4215	12/26/12	5/19/17	Contig	Kazusa DNA Research Institute	SAMD00036568	GCA_000333335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/335/GCA_000333335.1_ASM33333v1	-	B12
Corynebacterium-like bacterium B27	95617	PRJDA69967	69967	Terrabacteria group	Actinobacteria	4.23409	69.8	-	BADC01	1111	4508	3630	12/26/12	5/18/17	Contig	Kazusa DNA Research Institute	SAMD00036573	GCA_000333435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/435/GCA_000333435.1_ASM33343v1	-	B27
Promicromonosporaceae bacterium W15	1214064	PRJDB195	171360	Terrabacteria group	Actinobacteria	4.50057	71.1	-	BAGU01	626	4089	3182	8/29/12	5/19/17	Scaffold	Korea Research Institute of Bioscience and Biotechnology	SAMD00036623	GCA_000307245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/245/GCA_000307245.1_ASM30724v1	-	W15
Enterobacteriaceae bacterium B14	1214065	PRJDB196	171361	Proteobacteria	Gammaproteobacteria	3.82707	45.9	-	BAGV01	174	3410	3206	8/29/12	4/17/17	Scaffold	Korea Research Institute of Bioscience and Biotechnology	SAMD00036624	GCA_000307305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/305/GCA_000307305.1_ASM30730v1	23144398	B14
Peptoniphilus obesi ph1	1118062	PRJEA82275	82275	Terrabacteria group	Firmicutes	1.774	30.4	-	CAHB01	5	1704	1615	5/30/12	4/8/17	Scaffold	URMITE CNRS UMR 6236 IRD 198	SAMEA2272531	GCA_000311865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/865/GCA_000311865.1_ASM31186v1	-	ph1
Phocaeicola abscessus CCUG 55929	1204719	PRJEB57	169187	FCB group	Bacteroidetes/Chlorobi group	2.53688	47.3	-	CAKQ01	14	2106	1991	7/23/12	4/17/17	Scaffold	URMITE	SAMEA2272382	GCA_000312445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/445/GCA_000312445.1_ASM31244v1	-	CCUG 55929
Occidentia massiliensis	752179	PRJEB425	174734	Proteobacteria	Alphaproteobacteria	1.46925	29	-	CANJ01	301	1192	1039	10/1/12	4/17/17	Contig	URMITE	SAMEA2272772	GCA_000309075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/075/GCA_000309075.1_ASM30907v1	-	Os18
Enorma timonensis	1232436	PRJEB543	177109	Terrabacteria group	Actinobacteria	2.33155	65.8	-	CAPF01	118	2062	1937	11/28/12	5/18/17	Contig	URMITE	SAMEA2272249	GCA_000321165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/165/GCA_000321165.1_ASM32116v1	-	GD5
Oxalobacteraceae bacterium AB_14	1158293	PRJNA183351	183351	Proteobacteria	Betaproteobacteria	7.02801	64.2	-	ARMC01	9	6131	5912	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440486	GCA_000381565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/565/GCA_000381565.1_ASM38156v1	-	AB_14
Acidobacteriaceae bacterium KBS 83	1267533	PRJNA183352	183352	Acidobacteria	Acidobacteriia	6.25081	59.2	-	ARMD01	21	5305	5120	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440487	GCA_000381585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/585/GCA_000381585.1_ASM38158v1	-	KBS 83
Acidobacteriaceae bacterium KBS 89	1267534	PRJNA183353	183353	Acidobacteria	Acidobacteriia	6.00993	57.6	-	ARME01	13	5038	4880	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441326	GCA_000381605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/605/GCA_000381605.1_ASM38160v1	-	KBS 89
Acidobacteriaceae bacterium KBS 96	1267535	PRJNA183354	183354	Acidobacteria	Acidobacteriia	6.69216	57.2	-	ARMF01	2	5780	5606	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440488	GCA_000381625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/625/GCA_000381625.1_ASM38162v1	-	KBS 96
Chloroflexi bacterium SCGC AB-629-P13	1131272	PRJNA165541	165541	Terrabacteria group	Chloroflexi	0.842801	41.4	-	ARCO01	63	-	-	4/26/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02256396	GCA_000383835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/835/GCA_000383835.1_ASM38383v1	-	SCGC AB-629-P13
Microgenomates bacterium SCGC AAA011-J08	1047004	PRJNA195634	195634	unclassified Bacteria	Bacteria candidate phyla	0.168747	35.7	-	ARQN01	15	-	-	4/26/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440970	GCA_000384715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/715/GCA_000384715.1_ASM38471v1	-	SCGC AAA011-J08
Parcubacteria bacterium SCGC AAA011-J16	1046986	PRJNA195635	195635	unclassified Bacteria	Bacteria candidate phyla	0.167323	45.9	-	ARQO01	19	-	-	4/26/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441310	GCA_000384675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/675/GCA_000384675.1_ASM38467v1	-	SCGC AAA011-J16
alpha proteobacterium SCGC AAA300-B11	939383	PRJNA195637	195637	Proteobacteria	Alphaproteobacteria	0.177561	45.7	-	ARQQ01	51	-	-	4/26/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441311	GCA_000384575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/575/GCA_000384575.1_ASM38457v1	-	SCGC AAA300-B11
actinobacterium SCGC AAA015-D07	939195	PRJNA195638	195638	Terrabacteria group	Actinobacteria	0.629035	31.8	-	ARQR01	42	-	-	4/26/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440506	GCA_000384495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/495/GCA_000384495.1_ASM38449v1	-	SCGC AAA015-D07
actinobacterium SCGC AAA015-M09	939196	PRJNA195639	195639	Terrabacteria group	Actinobacteria	0.668084	32.2	-	ARQS01	67	-	-	4/26/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440507	GCA_000384515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/515/GCA_000384515.1_ASM38451v1	-	SCGC AAA015-M09
alpha proteobacterium SCGC AAA160-J14	1007113	PRJNA195654	195654	Proteobacteria	Alphaproteobacteria	0.712447	31.1	-	ARQT01	37	-	-	4/26/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441312	GCA_000384595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/595/GCA_000384595.1_ASM38459v1	-	SCGC AAA160-J14
alpha proteobacterium SCGC AAA536-G10	1009708	PRJNA195655	195655	Proteobacteria	Alphaproteobacteria	2.1617	31	-	ARQU01	148	-	-	4/26/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440508	GCA_000384615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/615/GCA_000384615.1_ASM38461v1	-	SCGC AAA536-G10
gamma proteobacterium SCGC AAA076-D02	1007114	PRJNA195659	195659	Proteobacteria	Gammaproteobacteria	1.76176	37.4	-	ARQW01	55	-	-	4/26/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440972	GCA_000384895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/895/GCA_000384895.1_ASM38489v1	-	SCGC AAA076-D02
gamma proteobacterium SCGC AAA076-D13	1007115	PRJNA195660	195660	Proteobacteria	Gammaproteobacteria	1.66338	37.5	-	ARQX01	81	-	-	4/26/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440509	GCA_000384855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/855/GCA_000384855.1_ASM38485v1	-	SCGC AAA076-D13
gamma proteobacterium SCGC AAA076-E13	1007116	PRJNA195661	195661	Proteobacteria	Gammaproteobacteria	0.953811	36.7	-	ARQY01	49	-	-	4/26/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440973	GCA_000384875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/875/GCA_000384875.1_ASM38487v1	-	SCGC AAA076-E13
gamma proteobacterium SCGC AAA076-F14	1007117	PRJNA195662	195662	Proteobacteria	Gammaproteobacteria	1.76398	37.2	-	ARQZ01	48	-	-	4/26/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440974	GCA_000384915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/915/GCA_000384915.1_ASM38491v1	-	SCGC AAA076-F14
gamma proteobacterium SCGC AAA076-P13	1007119	PRJNA195664	195664	Proteobacteria	Gammaproteobacteria	1.31116	34.2	-	ARRA01	39	-	-	4/26/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441647	GCA_000384935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/935/GCA_000384935.1_ASM38493v1	-	SCGC AAA076-P13
gamma proteobacterium SCGC AAA168-I18	1009425	PRJNA195672	195672	Proteobacteria	Gammaproteobacteria	0.957144	33.1	-	ARRB01	35	-	-	4/26/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440510	GCA_000384955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/955/GCA_000384955.1_ASM38495v1	-	SCGC AAA168-I18
gamma proteobacterium SCGC AAA300-D14	939696	PRJNA195673	195673	Proteobacteria	Gammaproteobacteria	1.45952	38.4	-	ARRC01	154	-	-	4/26/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441642	GCA_000384995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/995/GCA_000384995.1_ASM38499v1	-	SCGC AAA300-D14
gamma proteobacterium SCGC AAA536-J20	1009710	PRJNA195674	195674	Proteobacteria	Gammaproteobacteria	0.358127	33.1	-	ARRD01	94	-	-	4/26/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441302	GCA_000385015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/015/GCA_000385015.1_ASM38501v1	-	SCGC AAA536-J20
gamma proteobacterium SCGC AAA536-N21	1009711	PRJNA195675	195675	Proteobacteria	Gammaproteobacteria	0.43657	32.9	-	ARRE01	47	-	-	4/26/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440511	GCA_000385035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/035/GCA_000385035.1_ASM38503v1	-	SCGC AAA536-N21
Oceanospirillales bacterium SCGC AAA298-N10	939745	PRJNA195676	195676	Proteobacteria	Gammaproteobacteria	1.02098	32.3	-	ARRF01	189	-	-	4/26/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440512	GCA_000385115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/115/GCA_000385115.1_ASM38511v1	-	SCGC AAA298-N10
Verrucomicrobia bacterium SCGC AAA164-B23	1009414	PRJNA195678	195678	PVC group	Verrucomicrobia	0.118923	43.8	-	ARRH01	30	-	-	4/26/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440513	GCA_000385255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/255/GCA_000385255.1_ASM38525v1	-	SCGC AAA164-B23
Verrucomicrobia bacterium SCGC AAA164-I21	1009416	PRJNA195680	195680	PVC group	Verrucomicrobia	0.97021	45.5	-	ARRI01	203	-	-	4/26/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441304	GCA_000385275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/275/GCA_000385275.1_ASM38527v1	-	SCGC AAA164-I21
Verrucomicrobia bacterium SCGC AAA164-N20	1009419	PRJNA195682	195682	PVC group	Verrucomicrobia	1.20336	45.8	-	ARRJ01	189	-	-	4/26/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441305	GCA_000385295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/295/GCA_000385295.1_ASM38529v1	-	SCGC AAA164-N20
Verrucomicrobia bacterium SCGC AAA164-P11	1009421	PRJNA195683	195683	PVC group	Verrucomicrobia	0.278809	44.3	-	ARRK01	35	-	-	4/26/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440975	GCA_000385315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/315/GCA_000385315.1_ASM38531v1	-	SCGC AAA164-P11
gamma proteobacterium SCGC AAA168-P09	1009426	PRJNA195691	195691	Proteobacteria	Gammaproteobacteria	1.30925	33	-	ARRL01	46	-	-	4/26/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441643	GCA_000385055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/055/GCA_000385055.1_ASM38505v1	-	SCGC AAA168-P09
alpha proteobacterium SCGC AAA298-K06	939374	PRJNA195746	195746	Proteobacteria	Alphaproteobacteria	1.74427	40.3	-	ARRN01	231	-	-	4/26/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440976	GCA_000384635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/635/GCA_000384635.1_ASM38463v1	-	SCGC AAA298-K06
actinobacterium SCGC AAA027-M14	932041	PRJNA195747	195747	Terrabacteria group	Actinobacteria	0.822296	47.3	-	ARRO01	22	-	-	4/26/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440968	GCA_000384535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/535/GCA_000384535.1_ASM38453v1	-	SCGC AAA027-M14
Cloacimonetes bacterium JGI 0000039-I07	1047071	PRJNA195756	195756	FCB group	Candidatus Cloacimonetes	0.173565	39.5	-	ARRP01	16	-	-	4/26/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441644	GCA_000384755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/755/GCA_000384755.1_ASM38475v1	-	JGI 0000039-I07
Cloacimonetes bacterium JGI 0000039-I11	1047072	PRJNA195757	195757	FCB group	Candidatus Cloacimonetes	0.104827	45.2	-	ARRQ01	16	-	-	4/26/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440514	GCA_000384775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/775/GCA_000384775.1_ASM38477v1	-	JGI 0000039-I11
Cloacimonetes bacterium JGI 0000039-L21	1047075	PRJNA195758	195758	FCB group	Candidatus Cloacimonetes	0.145842	37.5	-	ARRR01	14	-	-	4/26/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441306	GCA_000384795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/795/GCA_000384795.1_ASM38479v1	-	JGI 0000039-L21
Latescibacteria bacterium JGI 0000059-A10	1047067	PRJNA195890	195890	FCB group	Candidatus Latescibacteria	0.142565	55.7	-	ARRS01	9	-	-	4/26/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441307	GCA_000384735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/735/GCA_000384735.1_ASM38473v1	-	JGI 0000059-A10
alpha proteobacterium SCGC AAA015-N04	939296	PRJNA195640	195640	Proteobacteria	Alphaproteobacteria	1.71387	30.6	-	ARSR01	74	-	-	4/26/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441297	GCA_000383115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/115/GCA_000383115.1_ASM38311v1	-	SCGC AAA015-N04
alpha proteobacterium SCGC AAA015-O19	939301	PRJNA195641	195641	Proteobacteria	Alphaproteobacteria	1.74267	39.1	-	ARSS01	157	-	-	4/26/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02440961	GCA_000383135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/135/GCA_000383135.1_ASM38313v1	-	SCGC AAA015-O19
alpha proteobacterium SCGC AAA076-C03	1007109	PRJNA195650	195650	Proteobacteria	Alphaproteobacteria	1.96778	36.7	-	ARST01	46	-	-	4/26/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441634	GCA_000383155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/155/GCA_000383155.1_ASM38315v1	-	SCGC AAA076-C03
alpha proteobacterium SCGC AAA076-E06	1007110	PRJNA195651	195651	Proteobacteria	Alphaproteobacteria	0.222504	36.8	-	ARSU01	11	-	-	4/26/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441298	GCA_000383175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/175/GCA_000383175.1_ASM38317v1	-	SCGC AAA076-E06
alpha proteobacterium SCGC AAA158-B04	1007111	PRJNA195652	195652	Proteobacteria	Alphaproteobacteria	0.502819	47.4	-	ARSV01	40	-	-	4/26/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02440962	GCA_000383195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/195/GCA_000383195.1_ASM38319v1	-	SCGC AAA158-B04
alpha proteobacterium SCGC AAA158-M15	1007112	PRJNA195653	195653	Proteobacteria	Alphaproteobacteria	0.390267	30.5	-	ARSW01	29	-	-	4/26/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02440963	GCA_000383215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/215/GCA_000383215.1_ASM38321v1	-	SCGC AAA158-M15
gamma proteobacterium SCGC AAA076-P09	1007118	PRJNA195663	195663	Proteobacteria	Gammaproteobacteria	0.987278	34	-	ARTE01	31	-	-	4/26/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441637	GCA_000383375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/375/GCA_000383375.1_ASM38337v1	-	SCGC AAA076-P09
gamma proteobacterium SCGC AAA160-D02	1007120	PRJNA195671	195671	Proteobacteria	Gammaproteobacteria	0.847628	43.1	-	ARTF01	54	-	-	4/26/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441300	GCA_000383395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/395/GCA_000383395.1_ASM38339v1	-	SCGC AAA160-D02
Verrucomicrobia bacterium SCGC AAA164-E04	1009415	PRJNA195679	195679	PVC group	Verrucomicrobia	3.9491	47.7	-	ARTV01	218	-	-	4/26/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441633	GCA_000383715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/715/GCA_000383715.1_ASM38371v1	-	SCGC AAA164-E04
Verrucomicrobia bacterium SCGC AAA164-M04	1009418	PRJNA195681	195681	PVC group	Verrucomicrobia	2.43311	48.5	-	ARTW01	143	-	-	4/26/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441301	GCA_000383735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/735/GCA_000383735.1_ASM38373v1	-	SCGC AAA164-M04
Verrucomicrobia bacterium SCGC AAA300-N18	939920	PRJNA195705	195705	PVC group	Verrucomicrobia	1.69362	43.7	-	ARTX01	260	-	-	4/26/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02440960	GCA_000383755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/755/GCA_000383755.1_ASM38375v1	-	SCGC AAA300-N18
Thermoplasmatales archaeon SCGC AB-539-C06	1242690	PRJNA177371	177371	Euryarchaeota	Thermoplasmata	0.593453	35	-	AOSH01	104	792	781	4/15/13	7/28/15	Contig	"Center for Geomicorbiology, Aarhus University"	SAMN02261088	GCA_000364885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/885/GCA_000364885.1_GATC	23535597	-
Candidatus Nanobsidianus stetteri	1294122	PRJNA189432	189432	DPANN group	Nanoarchaeota	0.593789	24.3	-	APJZ01	7	694	647	5/2/13	8/16/16	Contig	Oak Ridge National Lab	SAMN02470757	GCA_000387965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/965/GCA_000387965.1_Nst1	-	-
Caldisalinibacter kiritimatiensis	1304284	PRJNA196482	196482	Terrabacteria group	Firmicutes	2.7882	30.1	-	ARZA01	289	2662	2557	5/2/13	4/8/17	Contig	Leibniz Institute DSMZ	SAMN02470242	GCA_000387765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/765/GCA_000387765.1_L21-THTYG	-	L21-TH-D2
Sulfolobales archaeon Acd1	1294123	PRJNA189433	189433	TACK group	Crenarchaeota	1.50646	51.7	-	APJY01	8	-	-	5/7/13	7/29/15	Contig	Oak Ridge National Lab	SAMN02470749	GCA_000389735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/735/GCA_000389735.1_Acd1	23607440	-
BRC1 bacterium SCGC AAA252-M09	910028	PRJNA192400	192400	unclassified Bacteria	Bacteria candidate phyla	1.17425	57.7	-	ASKJ01	113	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440521	GCA_000399785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/785/GCA_000399785.1_ASM39978v1	23851394	SCGC AAA252-M09
Fervidibacteria bacterium JGI 0000001-D5	1052812	PRJNA192302	192302	unclassified Bacteria	Bacteria candidate phyla	0.586165	50.4	-	ASKK01	46	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440522	GCA_000397785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/785/GCA_000397785.1_ASM39778v1	23851394	JGI 0000001-D5
Fervidibacteria bacterium JGI 0000001-G10	1052813	PRJNA192303	192303	unclassified Bacteria	Bacteria candidate phyla	1.01389	50.7	-	ASKL01	94	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440954	GCA_000397765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/765/GCA_000397765.1_ASM39776v1	23851394	JGI 0000001-G10
Cloacimonetes bacterium SCGC AAA252-N05	1046964	PRJNA192341	192341	FCB group	Candidatus Cloacimonetes	0.90405	37	-	ASKM01	72	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441628	GCA_000397805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/805/GCA_000397805.1_ASM39780v1	23851394	SCGC AAA252-N05
Cloacimonetes bacterium SCGC AAA252-F02	1046955	PRJNA192351	192351	FCB group	Candidatus Cloacimonetes	0.789155	36.5	-	ASKN01	68	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441620	GCA_000397825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/825/GCA_000397825.1_ASM39782v1	23851394	SCGC AAA252-F02
Cloacimonetes bacterium SCGC AAA252-M08	1046963	PRJNA192399	192399	FCB group	Candidatus Cloacimonetes	1.6978	37.2	-	ASKO01	108	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440955	GCA_000397845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/845/GCA_000397845.1_ASM39784v1	23851394	SCGC AAA252-M08
Cloacimonetes bacterium SCGC AAA252-L05	1046961	PRJNA192407	192407	FCB group	Candidatus Cloacimonetes	0.753308	36.5	-	ASKP01	71	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441293	GCA_000397865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/865/GCA_000397865.1_ASM39786v1	23851394	SCGC AAA252-L05
Cloacimonetes bacterium SCGC AAA252-O17	1046970	PRJNA192469	192469	FCB group	Candidatus Cloacimonetes	1.94783	37.1	-	ASKQ01	116	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441621	GCA_000397885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/885/GCA_000397885.1_ASM39788v1	23851394	SCGC AAA252-O17
Cloacimonetes bacterium SCGC AAA255-B16	1046974	PRJNA192486	192486	FCB group	Candidatus Cloacimonetes	1.07179	36.9	-	ASKR01	100	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441622	GCA_000397905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/905/GCA_000397905.1_ASM39790v1	23851394	SCGC AAA255-B16
Cloacimonetes bacterium SCGC AAA255-L20	1046978	PRJNA192494	192494	FCB group	Candidatus Cloacimonetes	0.319853	36.2	-	ASKS01	41	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440956	GCA_000397925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/925/GCA_000397925.1_ASM39792v1	23851394	SCGC AAA255-L20
Parcubacteria bacterium SCGC AAA036-E14	1052848	PRJNA192342	192342	unclassified Bacteria	Bacteria candidate phyla	0.530689	32.4	-	ASKT01	53	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440523	GCA_000397945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/945/GCA_000397945.1_ASM39794v1	23851394	SCGC AAA036-E14
Parcubacteria bacterium SCGC AAA040-L21	1052844	PRJNA192343	192343	unclassified Bacteria	Bacteria candidate phyla	0.217827	41.7	-	ASKU01	22	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441285	GCA_000397965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/965/GCA_000397965.1_ASM39796v1	23851394	SCGC AAA040-L21
Parcubacteria bacterium SCGC AAA011-A09	1046987	PRJNA192358	192358	unclassified Bacteria	Bacteria candidate phyla	0.524065	42.7	-	ASKV01	16	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441286	GCA_000397985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/985/GCA_000397985.1_ASM39798v1	23851394	SCGC AAA011-A09
Parcubacteria bacterium SCGC AAA010-E09	1046996	PRJNA192366	192366	unclassified Bacteria	Bacteria candidate phyla	0.375352	43	-	ASKW01	28	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440957	GCA_000398005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/005/GCA_000398005.1_ASM39800v1	23851394	SCGC AAA010-E09
Candidatus Paceibacter normanii SCGC AAA255-P19	1047085	PRJNA192497	192497	unclassified Bacteria	Bacteria candidate phyla	0.553464	39	-	ASKX01	29	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440524	GCA_000398025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/025/GCA_000398025.1_ASM39802v1	23851394	SCGC AAA255-P19
Microgenomates bacterium SCGC AAA040-P11	699263	PRJNA192370	192370	unclassified Bacteria	Bacteria candidate phyla	0.52743	35	-	ASKY01	66	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441623	GCA_000398045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/045/GCA_000398045.1_ASM39804v1	23851394	SCGC AAA040-P11
Microgenomates bacterium SCGC AAA255-J07	1047002	PRJNA192492	192492	unclassified Bacteria	Bacteria candidate phyla	0.211711	39.4	-	ASKZ01	25	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441287	GCA_000398065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/065/GCA_000398065.1_ASM39806v1	23851394	SCGC AAA255-J07
Omnitrophica bacterium SCGC AAA252-B19	1047006	PRJNA192327	192327	PVC group	Candidatus Omnitrophica	0.518969	41.5	-	ASLA01	54	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441624	GCA_000398085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/085/GCA_000398085.1_ASM39808v1	23851394	SCGC AAA252-B19
Omnitrophica bacterium SCGC AAA011-L16	1047010	PRJNA192346	192346	PVC group	Candidatus Omnitrophica	0.468565	43	-	ASLC01	35	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441288	GCA_000398125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/125/GCA_000398125.1_ASM39812v1	23851394	SCGC AAA011-L16
Aminicenantes bacterium SCGC AAA252-C08	1047015	PRJNA192328	192328	unclassified Bacteria	Bacteria candidate phyla	1.08214	39	-	ASLD01	79	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440526	GCA_000398145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/145/GCA_000398145.1_ASM39814v1	23851394	SCGC AAA252-C08
Aminicenantes bacterium SCGC AAA252-N07	1047031	PRJNA192339	192339	unclassified Bacteria	Bacteria candidate phyla	0.751034	38.3	-	ASLE01	39	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441289	GCA_000398165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/165/GCA_000398165.1_ASM39816v1	23851394	SCGC AAA252-N07
Aminicenantes bacterium SCGC AAA252-N06	1047030	PRJNA192340	192340	unclassified Bacteria	Bacteria candidate phyla	0.475639	38.7	-	ASLF01	43	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440946	GCA_000398185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/185/GCA_000398185.1_ASM39818v1	23851394	SCGC AAA252-N06
Aminicenantes bacterium SCGC AAA252-G21	1047021	PRJNA192379	192379	unclassified Bacteria	Bacteria candidate phyla	1.4528	39	-	ASLG01	95	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441625	GCA_000398205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/205/GCA_000398205.1_ASM39820v1	23851394	SCGC AAA252-G21
Aminicenantes bacterium SCGC AAA252-J15	1047024	PRJNA192386	192386	unclassified Bacteria	Bacteria candidate phyla	1.00557	38.7	-	ASLH01	71	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440527	GCA_000398225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/225/GCA_000398225.1_ASM39822v1	23851394	SCGC AAA252-J15
Aminicenantes bacterium SCGC AAA252-L02	1047028	PRJNA192406	192406	unclassified Bacteria	Bacteria candidate phyla	0.752971	38.3	-	ASLI01	63	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440947	GCA_000398245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/245/GCA_000398245.1_ASM39824v1	23851394	SCGC AAA252-L02
Aminicenantes bacterium SCGC AAA252-O09	1047032	PRJNA192466	192466	unclassified Bacteria	Bacteria candidate phyla	1.87556	39	-	ASLJ01	101	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441290	GCA_000398265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/265/GCA_000398265.1_ASM39826v1	23851394	SCGC AAA252-O09
Aminicenantes bacterium SCGC AAA252-O10	1047033	PRJNA192467	192467	unclassified Bacteria	Bacteria candidate phyla	1.18666	39.1	-	ASLK01	99	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440528	GCA_000398285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/285/GCA_000398285.1_ASM39828v1	23851394	SCGC AAA252-O10
Aminicenantes bacterium SCGC AAA252-O11	1047034	PRJNA192468	192468	unclassified Bacteria	Bacteria candidate phyla	0.964336	39.1	-	ASLL01	76	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440529	GCA_000398305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/305/GCA_000398305.1_ASM39830v1	23851394	SCGC AAA252-O11
Aminicenantes bacterium SCGC AAA252-O19	1047035	PRJNA192470	192470	unclassified Bacteria	Bacteria candidate phyla	0.436443	39.4	-	ASLM01	45	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440948	GCA_000398325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/325/GCA_000398325.1_ASM39832v1	23851394	SCGC AAA252-O19
Aminicenantes bacterium SCGC AAA255-E10	1047041	PRJNA192483	192483	unclassified Bacteria	Bacteria candidate phyla	0.979257	40.4	-	ASLN01	103	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440530	GCA_000398345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/345/GCA_000398345.1_ASM39834v1	23851394	SCGC AAA255-E10
Aminicenantes bacterium SCGC AAA255-F06	1047042	PRJNA192484	192484	unclassified Bacteria	Bacteria candidate phyla	0.444384	38.9	-	ASLO01	43	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441291	GCA_000398365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/365/GCA_000398365.1_ASM39836v1	23851394	SCGC AAA255-F06
Aminicenantes bacterium SCGC AAA255-F09	1047043	PRJNA192485	192485	unclassified Bacteria	Bacteria candidate phyla	1.00531	38.8	-	ASLP01	74	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441292	GCA_000398385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/385/GCA_000398385.1_ASM39838v1	23851394	SCGC AAA255-F09
Aminicenantes bacterium SCGC AAA255-K14	1047044	PRJNA192493	192493	unclassified Bacteria	Bacteria candidate phyla	0.275018	39	-	ASLQ01	31	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440531	GCA_000398405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/405/GCA_000398405.1_ASM39840v1	23851394	SCGC AAA255-K14
Aminicenantes bacterium SCGC AAA255-O15	1047045	PRJNA192496	192496	unclassified Bacteria	Bacteria candidate phyla	0.431713	38.4	-	ASLR01	34	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441626	GCA_000398425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/425/GCA_000398425.1_ASM39842v1	23851394	SCGC AAA255-O15
Atribacteria bacterium JGI 0000059-I14	1047053	PRJNA192319	192319	unclassified Bacteria	Bacteria candidate phyla	0.498825	34.7	-	ASLS01	27	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440949	GCA_000398445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/445/GCA_000398445.1_ASM39844v1	23851394	JGI 0000059-I14
Atribacteria bacterium SCGC AAA255-E04	1047050	PRJNA192375	192375	unclassified Bacteria	Bacteria candidate phyla	0.152628	33.2	-	ASLT01	20	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440532	GCA_000398465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/465/GCA_000398465.1_ASM39846v1	23851394	SCGC AAA255-E04
Aigarchaeota archaeon SCGC AAA471-E16	1052828	PRJNA192306	192306	TACK group	Thaumarchaeota	0.525966	61.1	-	ASLU01	39	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441277	GCA_000398485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/485/GCA_000398485.1_ASM39848v1	23851394	SCGC AAA471-E16
Aigarchaeota archaeon SCGC AAA471-G05	1052830	PRJNA192308	192308	TACK group	Thaumarchaeota	0.640245	61.9	-	ASLV01	39	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440950	GCA_000398505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/505/GCA_000398505.1_ASM39850v1	23851394	SCGC AAA471-G05
Aigarchaeota archaeon SCGC AAA471-J07	1052832	PRJNA192310	192310	TACK group	Thaumarchaeota	0.249792	61.8	-	ASLW01	19	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441627	GCA_000398525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/525/GCA_000398525.1_ASM39852v1	23851394	SCGC AAA471-J07
Aigarchaeota archaeon SCGC AAA471-J08	1052833	PRJNA192311	192311	TACK group	Thaumarchaeota	0.252228	61.2	-	ASLX01	16	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441278	GCA_000398545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/545/GCA_000398545.1_ASM39854v1	23851394	SCGC AAA471-J08
Aigarchaeota archaeon JGI 0000001-A7	1052838	PRJNA192536	192536	TACK group	Thaumarchaeota	0.412511	54.2	-	ASLY01	33	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440951	GCA_000398565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/565/GCA_000398565.1_ASM39856v1	23851394	JGI 0000001-A7
Aigarchaeota archaeon JGI 0000001-H6	1052841	PRJNA192539	192539	TACK group	Thaumarchaeota	0.198883	59.4	-	ASLZ01	21	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440533	GCA_000398585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/585/GCA_000398585.1_ASM39858v1	23851394	JGI 0000001-H6
WS1 bacterium JGI 0000059-K21	1047063	PRJNA192320	192320	unclassified Bacteria	Bacteria candidate phyla	0.509551	64.6	-	ASMA01	54	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440952	GCA_000398605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/605/GCA_000398605.1_ASM39860v1	23851394	JGI 0000059-K21
Latescibacteria bacterium SCGC AAA252-D10	910049	PRJNA192410	192410	FCB group	Candidatus Latescibacteria	0.601658	40.9	-	ASMB01	60	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440534	GCA_000398625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/625/GCA_000398625.1_ASM39862v1	23851394	SCGC AAA252-D10
Cloacimonetes bacterium JGI 0000039-I17	1047073	PRJNA192294	192294	FCB group	Candidatus Cloacimonetes	0.327619	37.8	-	ASMC01	33	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441279	GCA_000398645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/645/GCA_000398645.1_ASM39864v1	23851394	JGI 0000039-I17
Cloacimonetes bacterium JGI 0000039-M09	1047076	PRJNA192296	192296	FCB group	Candidatus Cloacimonetes	0.516961	37.4	-	ASMD01	44	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440953	GCA_000398665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/665/GCA_000398665.1_ASM39866v1	23851394	JGI 0000039-M09
Cloacimonetes bacterium JGI 0000059-F17	1047078	PRJNA192318	192318	FCB group	Candidatus Cloacimonetes	0.360882	38	-	ASME01	25	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441612	GCA_000398685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/685/GCA_000398685.1_ASM39868v1	23851394	JGI 0000059-F17
Cloacimonetes bacterium JGI 0000059-L07	1047079	PRJNA192322	192322	FCB group	Candidatus Cloacimonetes	0.71261	37.5	-	ASMF01	50	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441280	GCA_000398705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/705/GCA_000398705.1_ASM39870v1	23851394	JGI 0000059-L07
Cloacimonetes bacterium JGI 0000059-P03	1047080	PRJNA192412	192412	FCB group	Candidatus Cloacimonetes	0.50668	37.6	-	ASMG01	29	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440938	GCA_000398725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/725/GCA_000398725.1_ASM39872v1	23851394	JGI 0000059-P03
Cloacimonetes bacterium JGI 0000059-P11	1047081	PRJNA192413	192413	FCB group	Candidatus Cloacimonetes	0.385079	37.5	-	ASMH01	28	-	-	5/16/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440939	GCA_000398745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/745/GCA_000398745.1_ASM39874v1	23851394	JGI 0000059-P11
Aminicenantes bacterium SCGC AAA252-B17	1047014	PRJNA192326	192326	unclassified Bacteria	Bacteria candidate phyla	0.965122	38.5	-	ASOF01	74	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441606	GCA_000404325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/325/GCA_000404325.1_ASM40432v1	23851394	SCGC AAA252-B17
Aerophobetes bacterium SCGC AAA255-F10	1052817	PRJNA192487	192487	unclassified Bacteria	Bacteria candidate phyla	1.26362	40.5	-	ASMN01	102	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440537	GCA_000404345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/345/GCA_000404345.1_ASM40434v1	23851394	SCGC AAA255-F10
Aerophobetes bacterium JGI 0000014-A15	1104574	PRJNA192368	192368	unclassified Bacteria	Bacteria candidate phyla	0.368019	37.4	-	ASMM01	32	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441282	GCA_000404365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/365/GCA_000404365.1_ASM40436v1	23851394	JGI 0000014-A15
Aminicenantes bacterium SCGC AAA252-G04	1047019	PRJNA192353	192353	unclassified Bacteria	Bacteria candidate phyla	0.978461	38.6	-	ASOH01	102	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441608	GCA_000404385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/385/GCA_000404385.1_ASM40438v1	23851394	SCGC AAA252-G04
Aminicenantes bacterium SCGC AAA252-D18	1047017	PRJNA192347	192347	unclassified Bacteria	Bacteria candidate phyla	1.40893	39.2	-	ASOG01	99	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441607	GCA_000404405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/405/GCA_000404405.1_ASM40440v1	23851394	SCGC AAA252-D18
Armatimonadetes bacterium JGI 0000077-K19	1104605	PRJNA192507	192507	Terrabacteria group	Armatimonadetes	1.3417	64.1	-	ASMK01	95	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440940	GCA_000404425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/425/GCA_000404425.1_ASM40442v1	23851394	JGI J00000077-K19
BRC1 bacterium SCGC AAA257-C11	1046935	PRJNA192498	192498	unclassified Bacteria	Bacteria candidate phyla	2.38373	48.4	-	ASML01	163	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441281	GCA_000404445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/445/GCA_000404445.1_ASM40444v1	23851394	SCGC AAA257-C11
Aminicenantes bacterium JGI 0000014-B08	1104591	PRJNA192278	192278	unclassified Bacteria	Bacteria candidate phyla	0.363946	49	-	ASOE01	41	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441265	GCA_000404465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/465/GCA_000404465.1_ASM40446v1	23851394	JGI 0000014-B08
Calescamantes bacterium JGI 0000106-N5	1130335	PRJNA192228	192228	unclassified Bacteria	Bacteria candidate phyla	0.638377	33.5	-	ASMT01	36	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441614	GCA_000404485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/485/GCA_000404485.1_ASM40448v1	23851394	JGI 0000106-N5
Calescamantes bacterium JGI 0000106-I17	1130331	PRJNA192460	192460	unclassified Bacteria	Bacteria candidate phyla	1.1816	30.1	-	ASMX01	36	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440941	GCA_000404505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/505/GCA_000404505.1_ASM40450v1	23851394	JGI 0000106-I17
Diapherotrites archaeon SCGC AAA011-N19	743731	PRJNA192502	192502	DPANN group	Candidatus Diapherotrites	0.302064	47	-	ASMS01	30	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441613	GCA_000404525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/525/GCA_000404525.1_ASM40452v1	23851394	SCGC AAA011-N19
Diapherotrites archaeon SCGC AAA011-K09	1104575	PRJNA192491	192491	DPANN group	Candidatus Diapherotrites	0.316537	44.3	-	ASMR01	24	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440541	GCA_000404545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/545/GCA_000404545.1_ASM40454v1	23851394	SCGC AAA011-K09
Calescamantes bacterium JGI 0000106-H18	1130330	PRJNA192476	192476	unclassified Bacteria	Bacteria candidate phyla	0.590496	34.2	-	ASMY01	54	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441284	GCA_000404565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/565/GCA_000404565.1_ASM40456v1	23851394	JGI 0000106-H18
Calescamantes bacterium JGI 0000106-P5	1130337	PRJNA192477	192477	unclassified Bacteria	Bacteria candidate phyla	0.531498	34.2	-	ASMZ01	36	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440942	GCA_000404585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/585/GCA_000404585.1_ASM40458v1	23851394	JGI 0000106-P5
Calescamantes bacterium JGI 0000106-M22	1130334	PRJNA192373	192373	unclassified Bacteria	Bacteria candidate phyla	1.07507	33.7	-	ASMW01	48	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441283	GCA_000404605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/605/GCA_000404605.1_ASM40460v1	23851394	JGI 0000106-M22
Calescamantes bacterium JGI 0000106-I5	1130332	PRJNA192503	192503	unclassified Bacteria	Bacteria candidate phyla	0.292729	34.2	-	ASNA01	43	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440943	GCA_000404625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/625/GCA_000404625.1_ASM40462v1	23851394	JGI 0000106-I5
Fervidibacteria bacterium JGI 0000001-B9	1052811	PRJNA192538	192538	unclassified Bacteria	Bacteria candidate phyla	0.811947	51.3	-	ASNB01	74	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441269	GCA_000404645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/645/GCA_000404645.1_ASM40464v1	23851394	JGI 0000001-B9
Calescamantes bacterium JGI 0000106-J16	1130333	PRJNA192335	192335	unclassified Bacteria	Bacteria candidate phyla	1.07592	33.8	-	ASMV01	55	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440543	GCA_000404665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/665/GCA_000404665.1_ASM40466v1	23851394	JGI 0000106-J16
Calescamantes bacterium JGI 0000106-N7	1130336	PRJNA192277	192277	unclassified Bacteria	Bacteria candidate phyla	1.4777	33.8	-	ASMU01	52	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440542	GCA_000404685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/685/GCA_000404685.1_ASM40468v1	23851394	JGI 0000106-N7
EM3 bacterium JGI 0000106-B10	1130338	PRJNA192334	192334	unclassified Bacteria	Bacteria candidate phyla	1.31394	33.8	-	ASNC01	62	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441615	GCA_000404705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/705/GCA_000404705.1_ASM40470v1	23851394	JGI 0000106-B10
Gracilibacteria bacterium JGI 0000069-P22	1130343	PRJNA192390	192390	unclassified Bacteria	Bacteria candidate phyla	0.341011	21.9	-	ASND01	30	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440944	GCA_000404725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/725/GCA_000404725.1_ASM40472v1	23851394	JGI 0000069-P22
Cloacimonetes bacterium SCGC AAA252-O02	1046967	PRJNA192222	192222	FCB group	Candidatus Cloacimonetes	0.897531	36.9	-	ASNG01	74	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440544	GCA_000404745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/745/GCA_000404745.1_ASM40474v1	23851394	SCGC AAA252-O02
Cloacimonetes bacterium SCGC AAA255-C20	1046975	PRJNA192304	192304	FCB group	Candidatus Cloacimonetes	1.36303	36.8	-	ASNH01	120	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441617	GCA_000404765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/765/GCA_000404765.1_ASM40476v1	23851394	SCGC AAA255-C20
Cloacimonetes bacterium SCGC AAA252-N17	1046966	PRJNA192336	192336	FCB group	Candidatus Cloacimonetes	2.41016	37.2	-	ASNI01	137	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441271	GCA_000404785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/785/GCA_000404785.1_ASM40478v1	23851394	SCGC AAA252-N17
Cloacimonetes bacterium SCGC AAA252-N11	913319	PRJNA192338	192338	FCB group	Candidatus Cloacimonetes	1.15099	37.1	-	ASNJ01	94	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440545	GCA_000404805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/805/GCA_000404805.1_ASM40480v1	23851394	SCGC AAA252-N11
Cloacimonetes bacterium SCGC AAA252-E20	1046954	PRJNA192350	192350	FCB group	Candidatus Cloacimonetes	1.62856	36.8	-	ASNK01	124	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441272	GCA_000404825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/825/GCA_000404825.1_ASM40482v1	23851394	SCGC AAA252-E20
Cloacimonetes bacterium SCGC AAA252-P14	1046973	PRJNA192364	192364	FCB group	Candidatus Cloacimonetes	0.813448	37.1	-	ASNL01	71	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441273	GCA_000404845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/845/GCA_000404845.1_ASM40484v1	23851394	SCGC AAA252-P14
Cloacimonetes bacterium SCGC AAA252-G08	1046957	PRJNA192378	192378	FCB group	Candidatus Cloacimonetes	1.83778	37.1	-	ASNM01	125	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440546	GCA_000404865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/865/GCA_000404865.1_ASM40486v1	23851394	SCGC AAA252-G08
Cloacimonetes bacterium SCGC AAA252-I11	1046958	PRJNA192380	192380	FCB group	Candidatus Cloacimonetes	1.93767	37.2	-	ASNN01	134	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441274	GCA_000404885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/885/GCA_000404885.1_ASM40488v1	23851394	SCGC AAA252-I11
Cloacimonetes bacterium SCGC AAA252-I16	1046959	PRJNA192383	192383	FCB group	Candidatus Cloacimonetes	1.96521	37.4	-	ASNO01	114	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441275	GCA_000404905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/905/GCA_000404905.1_ASM40490v1	23851394	SCGC AAA252-I16
Microgenomates bacterium SCGC AAA011-L6	699262	PRJNA192280	192280	unclassified Bacteria	Bacteria candidate phyla	0.946557	38.6	-	ASNZ01	46	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440549	GCA_000404925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/925/GCA_000404925.1_ASM40492v1	23851394	SCGC AAA011-L6
Microgenomates bacterium SCGC AAA011-I21	1104614	PRJNA192541	192541	unclassified Bacteria	Bacteria candidate phyla	0.363612	49.8	-	ASOA01	30	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440550	GCA_000404945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/945/GCA_000404945.1_ASM40494v1	23851394	SCGC AAA011-I21
Acetothermia bacterium SCGC AAA255-C06	1046991	PRJNA192374	192374	unclassified Bacteria	Bacteria candidate phyla	0.669384	54.9	-	ASOB01	85	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441605	GCA_000404965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/965/GCA_000404965.1_ASM40496v1	23851394	SCGC AAA255-C06
Gracilibacteria bacterium JGI 0000069-K10	1130342	PRJNA192474	192474	unclassified Bacteria	Bacteria candidate phyla	0.759477	23	-	ASNE01	65	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441616	GCA_000404985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/985/GCA_000404985.1_ASM40498v1	23851394	JGI 0000069-K10
Candidatus Altimarinus pacificus JGI 0000068-E11	1104584	PRJNA192505	192505	unclassified Bacteria	Bacteria candidate phyla	0.501814	29.2	-	ASNF01	54	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441270	GCA_000405005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/005/GCA_000405005.1_ASM40500v1	23851394	JGI 0000068-E11
Cloacimonetes bacterium SCGC AAA252-G07	1046956	PRJNA192384	192384	FCB group	Candidatus Cloacimonetes	0.499464	37.7	-	ASNP01	60	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441276	GCA_000405025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/025/GCA_000405025.1_ASM40502v1	23851394	SCGC AAA252-G07
Cloacimonetes bacterium SCGC AAA252-K16	1046960	PRJNA192404	192404	FCB group	Candidatus Cloacimonetes	1.18443	37	-	ASNQ01	87	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441261	GCA_000405045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/045/GCA_000405045.1_ASM40504v1	23851394	SCGC AAA252-K16
Cloacimonetes bacterium SCGC AAA252-L13	1046962	PRJNA192458	192458	FCB group	Candidatus Cloacimonetes	0.919075	36.8	-	ASNR01	74	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441618	GCA_000405065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/065/GCA_000405065.1_ASM40506v1	23851394	SCGC AAA252-L13
Cloacimonetes bacterium SCGC AAA252-P02	1046971	PRJNA192471	192471	FCB group	Candidatus Cloacimonetes	0.890714	36.5	-	ASNS01	73	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441262	GCA_000405085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/085/GCA_000405085.1_ASM40508v1	23851394	SCGC AAA252-P02
Cloacimonetes bacterium SCGC AAA252-P10	1046972	PRJNA192472	192472	FCB group	Candidatus Cloacimonetes	2.14526	37.2	-	ASNT01	123	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441263	GCA_000405105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/105/GCA_000405105.1_ASM40510v1	23851394	SCGC AAA252-P10
Hydrogenedentes bacterium JGI 0000077-D07	1104619	PRJNA192227	192227	FCB group	Candidatus Hydrogenedentes	1.40094	36.7	-	ASNU01	84	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441264	GCA_000405125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/125/GCA_000405125.1_ASM40512v1	23851394	JGI 0000077-D07
Hydrogenedentes bacterium JGI 0000077-O16	1104620	PRJNA192279	192279	FCB group	Candidatus Hydrogenedentes	1.78167	36.6	-	ASNV01	84	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440547	GCA_000405145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/145/GCA_000405145.1_ASM40514v1	23851394	JGI 0000077-O16
Parcubacteria bacterium SCGC AB-164-E21	1104582	PRJNA192299	192299	unclassified Bacteria	Bacteria candidate phyla	0.306368	33.3	-	ASNW01	17	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441619	GCA_000405165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/165/GCA_000405165.1_ASM40516v1	23851394	SCGC AB-164-E21
Parcubacteria bacterium SCGC AAA011-N16	699257	PRJNA192542	192542	unclassified Bacteria	Bacteria candidate phyla	0.431116	47.7	-	ASNX01	43	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440548	GCA_000405185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/185/GCA_000405185.1_ASM40518v1	23851394	SCGC AAA011-N16
Microgenomates bacterium SCGC AAA011-F5	699261	PRJNA192221	192221	unclassified Bacteria	Bacteria candidate phyla	0.201385	34.6	-	ASNY01	31	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441604	GCA_000405205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/205/GCA_000405205.1_ASM40520v1	23851394	SCGC AAA011-F5
Nanoarchaeota archaeon SCGC AAA011-D5	743729	PRJNA192371	192371	DPANN group	Nanoarchaeota	0.547038	37.3	-	ASMP01	13	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440539	GCA_000405225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/225/GCA_000405225.1_ASM40522v1	23851394	SCGC AAA011-D5
Candidatus Aenigmarchaeum subterraneum SCGC AAA011-O16	743730	PRJNA192394	192394	DPANN group	Candidatus Aenigmarchaeota	0.428886	38.6	-	ASMQ01	15	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440540	GCA_000405245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/245/GCA_000405245.1_ASM40524v1	23851394	SCGC AAA011-O16
Aminicenantes bacterium SCGC AAA252-P19	1047037	PRJNA192365	192365	unclassified Bacteria	Bacteria candidate phyla	1.34928	38.7	-	ASOL01	100	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441267	GCA_000405285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/285/GCA_000405285.1_ASM40528v1	23851394	SCGC AAA252-P19
Aminicenantes bacterium SCGC AAA252-D06	1047016	PRJNA192409	192409	unclassified Bacteria	Bacteria candidate phyla	1.85177	39	-	ASOS01	98	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441255	GCA_000405305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/305/GCA_000405305.1_ASM40530v1	23851394	SCGC AAA252-D06
Atribacteria bacterium SCGC AB-164-D21	1104598	PRJNA192490	192490	unclassified Bacteria	Bacteria candidate phyla	0.975853	34.9	-	ASPB01	78	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440936	GCA_000405325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/325/GCA_000405325.1_ASM40532v1	23851394	SCGC AB-164-D21
Atribacteria bacterium SCGC AAA255-N14	1047052	PRJNA192495	192495	unclassified Bacteria	Bacteria candidate phyla	1.42444	34.9	-	ASPC01	117	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441602	GCA_000405345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/345/GCA_000405345.1_ASM40534v1	23851394	SCGC AAA255-N14
Aminicenantes bacterium SCGC AAA252-G06	1047020	PRJNA192355	192355	unclassified Bacteria	Bacteria candidate phyla	1.47392	39.2	-	ASOJ01	98	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441609	GCA_000405365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/365/GCA_000405365.1_ASM40536v1	23851394	SCGC AAA252-G06
Aminicenantes bacterium SCGC AAA252-K06	910039	PRJNA192402	192402	unclassified Bacteria	Bacteria candidate phyla	1.18446	40.6	-	ASOP01	102	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441254	GCA_000405385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/385/GCA_000405385.1_ASM40538v1	23851394	SCGC AAA252-K06
Aminicenantes bacterium SCGC AAA252-J21	1047025	PRJNA192401	192401	unclassified Bacteria	Bacteria candidate phyla	1.36109	38.9	-	ASOO01	87	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441268	GCA_000405405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/405/GCA_000405405.1_ASM40540v1	23851394	SCGC AAA252-J21
Aminicenantes bacterium SCGC AAA252-G05	910041	PRJNA192354	192354	unclassified Bacteria	Bacteria candidate phyla	1.13269	38.9	-	ASOI01	78	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441266	GCA_000405425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/425/GCA_000405425.1_ASM40542v1	23851394	SCGC AAA252-G05
Aminicenantes bacterium SCGC AAA252-L10	1047029	PRJNA192457	192457	unclassified Bacteria	Bacteria candidate phyla	1.36557	39	-	ASOT01	96	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440931	GCA_000405445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/445/GCA_000405445.1_ASM40544v1	23851394	SCGC AAA252-L10
Atribacteria bacterium SCGC AB-164-L03	1104595	PRJNA192389	192389	unclassified Bacteria	Bacteria candidate phyla	0.436823	34.1	-	ASOW01	53	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440932	GCA_000405485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/485/GCA_000405485.1_ASM40548v1	23851394	SCGC AB-164-L03
Aminicenantes bacterium SCGC AAA252-I14	1047022	PRJNA192381	192381	unclassified Bacteria	Bacteria candidate phyla	1.4692	39.2	-	ASOM01	103	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440553	GCA_000405505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/505/GCA_000405505.1_ASM40550v1	23851394	SCGC AAA252-I14
Aminicenantes bacterium SCGC AAA252-K18	1047027	PRJNA192405	192405	unclassified Bacteria	Bacteria candidate phyla	0.820697	38.3	-	ASOR01	71	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440554	GCA_000405525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/525/GCA_000405525.1_ASM40552v1	23851394	SCGC AAA252-K18
Aminicenantes bacterium SCGC AAA252-P13	1047036	PRJNA192363	192363	unclassified Bacteria	Bacteria candidate phyla	1.03813	38.9	-	ASOK01	86	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440552	GCA_000405545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/545/GCA_000405545.1_ASM40554v1	23851394	SCGC AAA252-P13
Atribacteria bacterium JGI 0000014-F07	1104602	PRJEB8058	282870	unclassified Bacteria	Bacteria candidate phyla	1.13018	34.4	-	CDPL01	246	1169	983	5/2/15	8/1/17	Contig	CARDIFF	SAMEA3178399	GCA_001006965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/965/GCA_001006965.1_Aarhus_Bay_SAG_B17	-	-
Gemmatimonadetes bacterium SCGC AAA240-J22	939714	PRJNA190859	190859	FCB group	Gemmatimonadetes	0.630041	51.6	-	AXVX01	57	-	-	10/25/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441437	GCA_000482625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/625/GCA_000482625.1_ASM48262v1	-	SCGC AAA240-J22
Lentisphaerae bacterium SCGC AAA283-D08	1298911	PRJNA190792	190792	PVC group	Lentisphaerae	0.327034	43.6	-	AXWM01	38	-	-	10/25/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441440	GCA_000482685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/685/GCA_000482685.1_ASM48268v1	-	SCGC AAA283-D08
delta proteobacterium PSCGC 5451	1286376	PRJNA187122	187122	Proteobacteria	delta/epsilon subdivisions	2.75864	44.5	-	AXXK01	332	2803	2482	10/25/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440744	GCA_000483025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/025/GCA_000483025.1_ASM48302v1	-	PSCGC 5451
delta proteobacterium PSCGC 5342	1286375	PRJNA187121	187121	Proteobacteria	delta/epsilon subdivisions	1.75707	45.9	-	AXXL01	181	1732	1552	10/25/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440745	GCA_000483045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/045/GCA_000483045.1_ASM48304v1	-	PSCGC 5342
delta proteobacterium PSCGC 5296	1286374	PRJNA187120	187120	Proteobacteria	delta/epsilon subdivisions	1.39445	39.1	-	AXXM01	136	1374	1250	10/25/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441431	GCA_000483065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/065/GCA_000483065.1_ASM48306v1	-	PSCGC 5296
delta proteobacterium JGI 0000059-O15	1283296	PRJNA186461	186461	Proteobacteria	delta/epsilon subdivisions	0.545615	55.6	-	AXXO01	100	-	-	10/25/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02440728	GCA_000483085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/085/GCA_000483085.1_ASM48308v1	-	JGI 0000059-O15
Xanthomonadaceae bacterium JGI 0001020-F16	1268327	PRJNA183561	183561	Proteobacteria	Gammaproteobacteria	1.20834	65.8	-	AXYI01	83	-	-	10/25/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441085	GCA_000483265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/265/GCA_000483265.1_ASM48326v1	-	JGI 0001020-F16
Proteobacteria bacterium JGI 0001019-D04	1268324	PRJNA183558	183558	Proteobacteria	unclassified Proteobacteria	1.33104	59.2	-	AXYJ01	112	-	-	10/25/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441086	GCA_000483285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/285/GCA_000483285.1_ASM48328v1	-	JGI 0001019-D04
beta proteobacterium JGI 0001001-A11	1268298	PRJNA183375	183375	Proteobacteria	Betaproteobacteria	4.66374	63.6	-	AXYT01	113	-	-	10/25/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02440734	GCA_000483405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/405/GCA_000483405.1_ASM48340v1	-	JGI 0001001-A11
beta proteobacterium JGI 0001013-N12	1268299	PRJNA183373	183373	Proteobacteria	Betaproteobacteria	0.229348	63.7	-	AXYV01	43	-	-	10/25/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02440741	GCA_000483425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/425/GCA_000483425.1_ASM48342v1	-	JGI 0001013-N12
delta proteobacterium JGI 0002000-E07	1268301	PRJNA183369	183369	Proteobacteria	delta/epsilon subdivisions	1.52095	61.4	-	AXYW01	140	-	-	10/25/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441091	GCA_000483445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/445/GCA_000483445.1_ASM48344v1	-	JGI 0002000-E07
Bacteroidetes bacterium JGI 0000119-L22	1305741	PRJNA195865	195865	FCB group	Bacteroidetes/Chlorobi group	0.608022	61.6	-	AXVH01	82	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440770	GCA_000484615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/615/GCA_000484615.1_ASM48461v1	-	JGI 0000119-L22
Deltaproteobacteria bacterium SCGC AAA003-F15	939568	PRJNA190865	190865	Proteobacteria	delta/epsilon subdivisions	1.05753	41.4	-	AXVT01	139	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441101	GCA_000484715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/715/GCA_000484715.1_ASM48471v1	-	SCGC AAA003-F15
Gammaproteobacteria bacterium SCGC AAA003-E02	939637	PRJNA190862	190862	Proteobacteria	Gammaproteobacteria	1.60472	46.4	-	AXVV01	109	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441435	GCA_000484735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/735/GCA_000484735.1_ASM48473v1	-	SCGC AAA003-E02
Oxalobacteraceae bacterium JGI 0001012-C15	1298909	PRJNA190855	190855	Proteobacteria	Betaproteobacteria	0.640975	65.3	-	AXWA01	41	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440724	GCA_000484775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/775/GCA_000484775.1_ASM48477v1	-	JGI 0001012-C15
Proteobacteria bacterium JGI 0001009-D17	1298914	PRJNA190851	190851	Proteobacteria	unclassified Proteobacteria	0.912185	66.5	-	AXWC01	39	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441438	GCA_000484795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/795/GCA_000484795.1_ASM48479v1	-	JGI 0001009-D17
Euryarchaeota archaeum SCGC AAA287-I03	1298899	PRJNA190811	190811	Euryarchaeota	unclassified Euryarchaeota	0.622569	35.7	-	AXWH01	44	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441104	GCA_000484895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/895/GCA_000484895.1_ASM48489v1	-	SCGC AAA287-I03
Euryarchaeota archaeon SCGC AAA286-E23	1298898	PRJNA190810	190810	Euryarchaeota	unclassified Euryarchaeota	0.512945	26.5	-	AXWI01	54	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441439	GCA_000484915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/915/GCA_000484915.1_ASM48491v1	-	SCGC AAA286-E23
Euryarchaeota archaeum SCGC AAA287-E17	1298895	PRJNA190806	190806	Euryarchaeota	unclassified Euryarchaeota	0.928936	35.6	-	AXWJ01	52	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441105	GCA_000484935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/935/GCA_000484935.1_ASM48493v1	-	SCGC AAA287-E17
Euryarchaeota archaeum SCGC AAA287-N16	1298894	PRJNA190801	190801	Euryarchaeota	unclassified Euryarchaeota	0.394893	34.4	-	AXWK01	53	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441106	GCA_000484955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/955/GCA_000484955.1_ASM48495v1	-	SCGC AAA287-N16
Thaumarchaeota archaeon SCGC AAA282-K18	1298885	PRJNA190793	190793	TACK group	Thaumarchaeota	1.04351	33.4	-	AXWL01	40	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440765	GCA_000484975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/975/GCA_000484975.1_ASM48497v1	-	SCGC AAA282-K18
Planctomycetes bacterium SCGC AAA282-C19	1298906	PRJNA190784	190784	PVC group	Planctomycetes	0.873207	44.6	-	AXWN01	71	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441441	GCA_000484995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/995/GCA_000484995.1_ASM48499v1	-	SCGC AAA282-C19
Comamonadaceae bacterium JGI 0001013-A16	1286843	PRJNA187234	187234	Proteobacteria	Betaproteobacteria	0.295955	61.5	-	AXWY01	34	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440725	GCA_000485035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/035/GCA_000485035.1_ASM48503v1	-	JGI 0001013-A16
delta proteobacterium JGI 0000059-J07	1283297	PRJNA186463	186463	Proteobacteria	delta/epsilon subdivisions	1.172	52.2	-	AXXN01	131	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440746	GCA_000485135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/135/GCA_000485135.1_ASM48513v1	-	JGI 0000059-J07
delta proteobacterium JGI 0000059-K16	1283295	PRJNA186460	186460	Proteobacteria	delta/epsilon subdivisions	0.926329	52.2	-	AXXP01	114	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441095	GCA_000485155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/155/GCA_000485155.1_ASM48515v1	-	JGI 0000059-K16
Proteobacteria bacterium JGI 0001013-N05	1268340	PRJNA183574	183574	Proteobacteria	unclassified Proteobacteria	0.80962	59.5	-	AXYC01	141	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441419	GCA_000485275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/275/GCA_000485275.1_ASM48527v1	-	JGI 0001013-N05
Chitinophagaceae bacterium JGI 0001013-J17	1268323	PRJNA183557	183557	FCB group	Bacteroidetes/Chlorobi group	1.18226	38.9	-	AXYK01	163	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441087	GCA_000485375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/375/GCA_000485375.1_ASM48537v1	-	JGI 0001013-J17
Bacteroidetes bacterium JGI 0001001-A08	1268295	PRJNA183374	183374	FCB group	Bacteroidetes/Chlorobi group	0.180196	36.6	-	AXYU01	22	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441090	GCA_000485435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/435/GCA_000485435.1_ASM48543v1	-	JGI 0001001-A08
Chloroflexi bacterium JGI 0002000-F10	1274413	PRJNA183362	183362	Terrabacteria group	Chloroflexi	1.24651	54.9	-	AXYX01	234	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441426	GCA_000485455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/455/GCA_000485455.1_ASM48545v1	-	JGI 0002000-F10
Candidatus Ancillula trichonymphae ImTpAt	1265510	PRJNA182473	182473	Terrabacteria group	Actinobacteria	1.15841	44.4	-	AXYY01	149	-	-	10/25/13	8/29/16	Contig	DOE Joint Genome Institute	SAMN02441092	GCA_000485475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/475/GCA_000485475.1_ASM48547v1	-	ImTpAt
actinobacterium SCGC AAA044-D11	938518	PRJNA177882	177882	Terrabacteria group	Actinobacteria	1.15458	44.2	-	AXZA01	30	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441082	GCA_000485495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/495/GCA_000485495.1_ASM48549v1	-	SCGC AAA044-D11
Burkholderiales bacterium JGI 0001003-A5	1094951	PRJNA176449	176449	Proteobacteria	Betaproteobacteria	0.686115	64.5	-	AXZB01	48	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441083	GCA_000485515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/515/GCA_000485515.1_ASM48551v1	-	JGI 0001003-A5
alpha proteobacterium JGI 0001002-I18	1094970	PRJNA176048	176048	Proteobacteria	Alphaproteobacteria	0.565176	58.9	-	ATTU02	53	-	-	7/9/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440563	GCA_000419845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/845/GCA_000419845.2_ASM41984v2	-	JGI 0001002-I18
Chitinophagaceae bacterium JGI 0001002-J12	1094955	PRJNA176052	176052	FCB group	Bacteroidetes/Chlorobi group	0.942013	38.8	-	ATTW02	122	-	-	7/9/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441596	GCA_000419885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/885/GCA_000419885.2_ASM41988v2	-	JGI 0001002-J12
Rhizobiales bacterium JGI 0001002-O7	1094965	PRJNA176044	176044	Proteobacteria	Alphaproteobacteria	0.67278	59	-	AUNP02	70	-	-	7/16/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441139	GCA_000463755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/755/GCA_000463755.2_ASM46375v2	-	JGI 0001002-O7
Oxalobacteraceae bacterium JGI 0001002-K6	1094960	PRJNA176064	176064	Proteobacteria	Betaproteobacteria	0.368093	62	-	AUOE02	33	-	-	7/16/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440697	GCA_000464055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/055/GCA_000464055.2_ASM46405v2	-	JGI 0001002-K6
Burkholderiales bacterium JGI 0001003-J08	1235982	PRJNA176065	176065	Proteobacteria	Betaproteobacteria	0.394907	64.6	-	AUOF02	28	-	-	7/16/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440797	GCA_000464075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/075/GCA_000464075.2_ASM46407v2	-	JGI 0001003-J08
Rhizobiales bacterium JGI 0001003-E12	1094966	PRJNA176066	176066	Proteobacteria	Alphaproteobacteria	0.223414	60.5	-	AUOG02	19	-	-	7/16/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440698	GCA_000464095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/095/GCA_000464095.2_ASM46409v2	-	JGI 0001003-E12
Burkholderiales bacterium JGI 0001002-H06	1235981	PRJNA176068	176068	Proteobacteria	Betaproteobacteria	0.415398	66.4	-	AUOI02	26	-	-	7/16/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440798	GCA_000464135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/135/GCA_000464135.2_ASM46413v2	-	JGI 0001002-H06
alpha proteobacterium JGI 0001002-C12	1094971	PRJNA176073	176073	Proteobacteria	Alphaproteobacteria	0.658223	62.8	-	AUOM02	78	-	-	7/16/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441461	GCA_000464215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/215/GCA_000464215.2_ASM46421v2	-	JGI 0001002-C12
Cytophagaceae bacterium JGI 0001001-B3	1094958	PRJNA176081	176081	FCB group	Bacteroidetes/Chlorobi group	2.08938	48.5	-	AUOS02	173	-	-	7/16/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441135	GCA_000464335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/335/GCA_000464335.2_ASM46433v2	-	JGI 0001001-B3
Rhizobiales bacterium JGI 001012-O08	1167727	PRJNA175201	175201	Proteobacteria	Alphaproteobacteria	0.81083	58.5	-	AUSA02	48	-	-	7/17/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440704	GCA_000438885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/885/GCA_000438885.2_ASM43888v2	-	JGI 001012-O08
Oxalobacteraceae bacterium JGI 001010-B17	1167724	PRJNA175213	175213	Proteobacteria	Betaproteobacteria	0.825556	62	-	AUSC02	77	-	-	7/17/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441130	GCA_000438925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/925/GCA_000438925.2_ASM43892v2	-	JGI 001010-B17
Proteobacteria bacterium JGI 0001002-H11	1268319	PRJNA183553	183553	Proteobacteria	unclassified Proteobacteria	0.405062	64.1	-	AXYN01	40	-	-	10/25/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441422	GCA_000492135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/135/GCA_000492135.1_ASM49213v1	-	JGI 0001002-H11
Firmicutes bacterium ASF500	1378168	PRJNA213743	213743	Terrabacteria group	Firmicutes	3.70457	58.6	-	AYJP01	22	3645	3396	10/30/13	4/9/17	Scaffold	Broad Institute	SAMN02597027	GCA_000492175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/175/GCA_000492175.1_Firm_bact_ASF500_V1	24723722	ASF500
Cloacimonetes bacterium JGI OTU-2	1379398	PRJNA213458	213458	FCB group	Candidatus Cloacimonetes	1.84289	37.1	-	AWNY01	154	-	-	10/31/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441775	GCA_000493905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/905/GCA_000493905.1_Cloacimonetes_bacterium_OTU_2	23851394	JGI OTU-2
Cloacimonetes bacterium JGI OTU-1	1379399	PRJNA213459	213459	FCB group	Candidatus Cloacimonetes	3.07016	36.7	-	AWNX01	193	-	-	10/31/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441760	GCA_000493925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/925/GCA_000493925.1_Cloacimonetes_bacterium_OTU_1	23851394	JGI OTU-1
Candidatus Hydrogenedens terephthalicus JGI OTU-1	1379305	PRJNA213448	213448	FCB group	Candidatus Hydrogenedentes	2.8744	36.9	-	AWNW01	106	-	-	10/31/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441759	GCA_000493945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/945/GCA_000493945.1_Hydrogenedentes_bacterium_OTU_1	23851394	JGI OTU-1
Candidatus Aminicenans sakinawicola JGI OTU-1	1383028	PRJNA213357	213357	unclassified Bacteria	Bacteria candidate phyla	2.91363	39.3	-	AWNV01	134	-	-	10/31/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441763	GCA_000493965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/965/GCA_000493965.1_Aminicenantes_bacterium_OTU_1	23851394	JGI OTU-1
Aminicenantes bacterium JGI OTU-2	1379385	PRJNA213449	213449	unclassified Bacteria	Bacteria candidate phyla	2.40569	39.1	-	AWNU01	184	-	-	10/31/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441772	GCA_000493985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/985/GCA_000493985.1_Aminicenantes_bacterium_OTU_2	23851394	JGI OTU-2
Cloacimonetes bacterium JGI OTU-5	1379393	PRJNA213455	213455	FCB group	Candidatus Cloacimonetes	1.09558	32.9	-	AWNS01	85	-	-	10/31/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441773	GCA_000494005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/005/GCA_000494005.1_Cloacimonetes_bacterium_OTU_5	23851394	JGI OTU-5
Cloacimonetes bacterium JGI OTU-6	1379394	PRJNA213456	213456	FCB group	Candidatus Cloacimonetes	0.839959	31.2	-	AWNR01	90	-	-	10/31/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441771	GCA_000494025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/025/GCA_000494025.1_Cloacimonetes_bacterium_OTU_6	23851394	JGI OTU-6
Cloacimonetes bacterium JGI OTU-3	1379397	PRJNA213457	213457	FCB group	Candidatus Cloacimonetes	1.78937	37.8	-	AWNP01	119	-	-	10/31/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441758	GCA_000494045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/045/GCA_000494045.1_Cloacimonetes_bacterium_OTU_3	23851394	JGI OTU-3
Nanoarchaeota archaeon JGI OTU-2	1379391	PRJNA213453	213453	DPANN group	Nanoarchaeota	0.558681	32.1	-	AWOH01	46	-	-	10/31/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441767	GCA_000494085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/085/GCA_000494085.1_Nanoarchaeota_archaeon_OTU_2_combined_assembly	23851394	JGI OTU-2
Nanoarchaeota archaeon JGI OTU-1	1379390	PRJNA213452	213452	DPANN group	Nanoarchaeota	1.1439	32	-	AWOG01	69	-	-	10/31/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441766	GCA_000494105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/105/GCA_000494105.1_Nanoarchaeota_archaeon_OTU_1_combined_assembly	23851394	JGI OTU-1
Thaumarchaeota archaeon JGI OTU-4	1379389	PRJNA213451	213451	TACK group	Thaumarchaeota	0.617045	60.4	-	AWOF01	44	-	-	10/31/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441770	GCA_000494125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/125/GCA_000494125.1_Aigarchaeota_archaeon_OTU_4	23851394	JGI OTU-4
Thaumarchaeota archaeon JGI OTU-1	1378080	PRJNA213352	213352	TACK group	Thaumarchaeota	1.18034	61.4	-	AWOE01	128	-	-	10/31/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441769	GCA_000494145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/145/GCA_000494145.1_Aigarchaeota_archaeon_OTU_1	23851394	JGI OTU-1
Thaumarchaeota archaeon JGI OTU-2	1395101	PRJNA212803	212803	TACK group	Thaumarchaeota	0.654645	61.7	-	AWOD01	44	-	-	10/31/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441762	GCA_000494165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/165/GCA_000494165.1_Aigarchaeota_archaeon_OTU_2	23851394	JGI OTU-2
Thaumarchaeota archaeon JGI OTU-3	1379386	PRJNA213450	213450	TACK group	Thaumarchaeota	0.688171	54.9	-	AWOC01	51	-	-	10/31/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441761	GCA_000494185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/185/GCA_000494185.1_Aigarchaeota_archaeon_OTU_3	23851394	JGI OTU-3
crenarchaeote JGI-OTU-1	1415632	PRJNA213353	213353	TACK group	Crenarchaeota	1.40818	28.7	-	AWOB01	33	-	-	10/31/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441765	GCA_000494205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/205/GCA_000494205.1_Geoarchaeota_archaeon_OTU_1	23851394	JGI-OTU-1
Candidatus Calescibacterium nevadense OTU 1	1379303	PRJNA213355	213355	unclassified Bacteria	Bacteria candidate phyla	2.3179	34.2	-	AWOA01	146	-	-	10/31/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441764	GCA_000494225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/225/GCA_000494225.1_Calescamantes_bacterium_OTU_1	23851394	JGI OTU-1
Candidatus Fervidibacter sacchari JGI OTU-1	1383060	PRJNA213354	213354	unclassified Bacteria	Bacteria candidate phyla	1.53686	50.7	-	AWNZ01	150	-	-	10/31/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441768	GCA_000494245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/245/GCA_000494245.1_Fervidibacteria_bacterium_OTU_1	23851394	JGI OTU-1
Atribacteria bacterium JGI OTU-1	1383026	PRJNA213356	213356	unclassified Bacteria	Bacteria candidate phyla	2.09142	34.5	-	AWNT01	153	-	-	10/31/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441774	GCA_000494265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/265/GCA_000494265.1_Atribacteria_bacterium_OTU_1	23851394	JGI OTU-1
Cloacimonetes bacterium JGI OTU-4	1379392	PRJNA213454	213454	FCB group	Candidatus Cloacimonetes	0.611376	37.5	-	AWNQ01	60	-	-	10/31/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441777	GCA_000494285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/285/GCA_000494285.1_Cloacimonetes_bacterium_OTU_4	23851394	JGI OTU-4
Firmicutes bacterium JGI 0000112-L22	1239288	PRJNA176561	176561	Terrabacteria group	Firmicutes	0.237125	48	-	AYKX01	98	-	-	10/31/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441077	GCA_000494545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/545/GCA_000494545.1_ASM49454v1	-	JGI 0000112-L22
Firmicutes bacterium JGI 0000112-P22	1239287	PRJNA176562	176562	Terrabacteria group	Firmicutes	1.17147	66.4	-	AYKY01	418	-	-	10/31/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440739	GCA_000494565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/565/GCA_000494565.1_ASM49456v1	-	JGI 0000112-P22
Chloroflexi bacterium JGI 0000112-G22	1239289	PRJNA176563	176563	Terrabacteria group	Chloroflexi	1.24039	55.7	-	AYKZ01	417	-	-	10/31/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441078	GCA_000494585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/585/GCA_000494585.1_ASM49458v1	-	JGI 0000112-G22
Gemmatimonadetes bacterium JGI 0000112-M07	1239290	PRJNA176564	176564	FCB group	Gemmatimonadetes	2.91259	57.8	-	AYLA01	863	-	-	10/31/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441416	GCA_000494605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/605/GCA_000494605.1_ASM49460v1	-	JGI 0000112-M07
Bacteroidetes bacterium JGI 0000112-P09	1239291	PRJNA176565	176565	FCB group	Bacteroidetes/Chlorobi group	0.89049	58.4	-	AYLB01	361	-	-	10/31/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441417	GCA_000494625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/625/GCA_000494625.1_ASM49462v1	-	JGI 0000112-P09
Firmicutes bacterium JGI 0000112-H15	1239286	PRJNA176566	176566	Terrabacteria group	Firmicutes	0.554853	60.3	-	AYLC01	248	-	-	10/31/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440740	GCA_000494645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/645/GCA_000494645.1_ASM49464v1	-	JGI 0000112-H15
Firmicutes bacterium JGI 0000112-M16	1239285	PRJNA176567	176567	Terrabacteria group	Firmicutes	1.15866	67.2	-	AYLD01	571	-	-	10/31/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441079	GCA_000494665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/665/GCA_000494665.1_ASM49466v1	-	JGI 0000112-M16
Deinococcus-Thermus bacterium JGI 0000112-G17	1239293	PRJNA176577	176577	Terrabacteria group	Deinococcus-Thermus	0.82054	58.4	-	AYLE01	337	-	-	10/31/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441418	GCA_000494685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/685/GCA_000494685.1_ASM49468v1	-	JGI 0000112-G17
Firmicutes bacterium JGI 0000112-J22	1239284	PRJNA176578	176578	Terrabacteria group	Firmicutes	1.3698	63.1	-	AYLF01	345	-	-	10/31/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441080	GCA_000494705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/705/GCA_000494705.1_ASM49470v1	-	JGI 0000112-J22
alpha proteobacterium IMCC14465	1220535	PRJNA172242	172242	Proteobacteria	Alphaproteobacteria	1.92366	47.4	-	ALYF01	16	1879	1821	8/28/12	4/17/17	Contig	Inha university	SAMN02469922	GCA_000293845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/845/GCA_000293845.2_ASM29384v2	23209213	IMCC14465
Paraburkholderia xenovorans LB400	266265	PRJNA244540	244540	Proteobacteria	Betaproteobacteria	9.70295	62.6331	chromosome 1:NZ_CP008760.1/CP008760.1; chromosome 2:NZ_CP008762.1/CP008762.1; chromosome 3:NZ_CP008761.1/CP008761.1	-	3	8780	8386	9/18/14	9/21/17	Complete Genome	Los Alamos National Laboratory	SAMN02866417	GCA_000756045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/045/GCA_000756045.1_ASM75604v1	25414490	LB400
Pandoraea apista	93218	PRJNA305052	305052	Proteobacteria	Betaproteobacteria	5.57126	62.632	chromosome:NZ_CP013481.2/CP013481.2; plasmid unnamed:NZ_CP013482.1/CP013482.1	-	2	5043	4886	12/14/15	4/16/17	Complete Genome	University of Malaya	SAMN04316586	GCA_001465595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/465/595/GCA_001465595.2_ASM146559v2	-	DSM 16535
Dehalobacter sp. E1 x Sedimentibacter sp. B4 coculture	1079111	PRJEB387	177098	Terrabacteria group	Firmicutes	6.91235	41.6	-	CANF01	2357	-	-	10/2/12	9/30/15	Contig	WUR	SAMEA2272415	GCA_000309335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/335/GCA_000309335.1_ASM30933v1	-	-
alpha proteobacterium RS24	1397666	PRJNA217824	217824	Proteobacteria	Alphaproteobacteria	1.95772	45.1	-	AWXE01	5	1931	1866	9/20/13	4/9/17	Contig	KAUST	SAMN02470126	GCA_000469155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/155/GCA_000469155.1_RS24	24785133	RS24
actinobacterium LLX17	1229203	PRJNA174161	174161	Terrabacteria group	Actinobacteria	3.00094	70.6	-	AUZE01	1	2992	2886	9/24/13	4/9/17	Scaffold	University of Notre Dame	SAMN02471195	GCA_000471045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/045/GCA_000471045.1_LLX17V1	23889754	LLX17
Candidatus Schmidhempelia bombi str. Bimp	1387197	PRJNA216921	216921	Proteobacteria	Gammaproteobacteria	1.99854	36.6	-	AWGA01	79	1752	1609	9/25/13	4/9/17	Contig	University of Arizona	SAMN02316836	GCA_000471645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/645/GCA_000471645.1_BiG_1.0	24747890	Bimp
Lachnospiraceae bacterium VE202-23	1232456	PRJDB538	219222	Terrabacteria group	Firmicutes	7.33066	46.7	-	BAIG01	314	7013	5588	9/14/13	4/9/17	Contig	The University of Tokyo	SAMD00003404	GCA_000471745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/745/GCA_000471745.1_ASM47174v1	-	VE202-23
Oscillospiraceae bacterium VE202-24	1232459	PRJDB539	219223	Terrabacteria group	Firmicutes	3.23455	59.4	-	BAIH01	357	3425	2601	9/14/13	4/9/17	Contig	The University of Tokyo	SAMD00004029	GCA_000471765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/765/GCA_000471765.1_ASM47176v1	-	VE202-24
Lachnospiraceae bacterium VE202-12	1232455	PRJDB531	219221	Terrabacteria group	Firmicutes	7.62807	46.7	-	BAHZ01	502	7702	5567	9/14/13	4/9/17	Contig	The University of Tokyo	SAMD00009047	GCA_000471825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/825/GCA_000471825.1_ASM47182v1	-	VE202-12
Rhodobacteraceae bacterium HIMB11	1366046	PRJNA212435	212435	Proteobacteria	Alphaproteobacteria	3.09875	49.7	-	AVDB01	34	3170	3055	9/30/13	4/9/17	Contig	Center for Microbial Oceanography: Research and Education (C-MORE)	SAMN02257761	GCA_000472185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/185/GCA_000472185.1_HIMB11v1.0	-	HIMB11
Croceicoccus naphthovorans	1348774	PRJNA285726	285726	Proteobacteria	Alphaproteobacteria	3.86356	62.604	chromosome:NZ_CP011770.1/CP011770.1; plasmid p1:NZ_CP011771.1/CP011771.1; plasmid p2:NZ_CP011772.1/CP011772.1	-	3	3827	3611	6/12/15	4/10/17	Complete Genome	Zhejiang University	SAMN03757733	GCA_001028705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/705/GCA_001028705.1_ASM102870v1	-	PQ-2
Clostridiales bacterium oral taxon 876 str. F0540	1321778	PRJNA198885	198885	Terrabacteria group	Firmicutes	4.76753	32.9	-	AWSZ01	57	4559	4470	9/12/13	4/9/17	Scaffold	Washington University	SAMN02436756	GCA_000466585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/585/GCA_000466585.1_ASM46658v1	-	F0540
Peptostreptococcaceae bacterium oral taxon 113 str. W5053	1321784	PRJNA198890	198890	Terrabacteria group	Firmicutes	2.08825	37.1	-	AWVB01	129	2128	1965	9/16/13	4/9/17	Scaffold	Washington University	SAMN02436814	GCA_000467935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/935/GCA_000467935.1_ASM46793v1	-	W5053
Brevibacterium linens	1703	PRJNA340866	340866	Terrabacteria group	Actinobacteria	4.20993	62.6	chromosome:NZ_CP017150.1/CP017150.1	-	1	3871	3705	9/16/16	4/13/17	Complete Genome	Universite Laval	SAMN05714647	GCA_001729525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/525/GCA_001729525.1_ASM172952v1	-	SMQ-1335
Solimonas soli DSM 21787	1123261	PRJNA195811	195811	Proteobacteria	Gammaproteobacteria	4.1865	68.5	-	AXDW01	34	3814	3695	10/18/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440774	GCA_000474945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/945/GCA_000474945.1_ASM47494v1	-	DSM 21787
Latescibacteria bacterium SCGC AAA252-B13	910048	PRJNA192325	192325	FCB group	Candidatus Latescibacteria	1.75998	40.9	-	ASWY01	138	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440557	GCA_000478645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/645/GCA_000478645.1_ASM47864v1	23851394	SCGC AAA252-B13
Dermabacter vaginalis	1630135	PRJNA286956	286956	Terrabacteria group	Actinobacteria	2.39231	62.6	chromosome:NZ_CP012117.1/CP012117.1	-	1	2110	2015	7/5/16	4/13/17	Complete Genome	Korea Research Institute Bioscience and Biotechnology	SAMN03774729	GCA_001678905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/905/GCA_001678905.1_ASM167890v1	-	AD1-86
Cloacimonetes bacterium JGI 0000014-K11	1130348	PRJNA192475	192475	FCB group	Candidatus Cloacimonetes	0.671361	31	-	ASPN01	73	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441260	GCA_000405585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/585/GCA_000405585.1_ASM40558v1	23851394	JGI 0000014-K11
Atribacteria bacterium SCGC AAA255-G05	1047051	PRJNA192488	192488	unclassified Bacteria	Bacteria candidate phyla	1.65332	34.6	-	ASPA01	131	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440935	GCA_000405605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/605/GCA_000405605.1_ASM40560v1	23851394	SCGC AAA255-G05
Aminicenantes bacterium SCGC AAA255-A06	1047038	PRJNA192540	192540	unclassified Bacteria	Bacteria candidate phyla	1.38724	39.1	-	ASOV01	105	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440555	GCA_000405625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/625/GCA_000405625.1_ASM40562v1	23851394	SCGC AAA255-A06
Atribacteria bacterium JGI 0000079-L04	1104603	PRJNA192462	192462	unclassified Bacteria	Bacteria candidate phyla	1.01128	35.6	-	ASOY01	52	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441256	GCA_000405645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/645/GCA_000405645.1_ASM40564v1	23851394	JGI 0000079-L04
Aminicenantes bacterium SCGC AAA255-E05	1047040	PRJNA192482	192482	unclassified Bacteria	Bacteria candidate phyla	0.83673	39	-	ASOU01	71	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441611	GCA_000405665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/665/GCA_000405665.1_ASM40566v1	23851394	SCGC AAA255-E05
Aigarchaeota archaeon JGI 0000106-J15	1130285	PRJNA192397	192397	TACK group	Thaumarchaeota	1.08532	37.9	-	ASPF01	34	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440925	GCA_000405685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/685/GCA_000405685.1_ASM40568v1	23851394	JGI 0000106-J15
Atribacteria bacterium SCGC AB-164-P05	1104597	PRJNA192392	192392	unclassified Bacteria	Bacteria candidate phyla	0.504973	35	-	ASOX01	32	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440933	GCA_000405705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/705/GCA_000405705.1_ASM40570v1	23851394	SCGC AB-164-P05
Aminicenantes bacterium SCGC AAA252-J09	1047023	PRJNA192385	192385	unclassified Bacteria	Bacteria candidate phyla	1.92074	38.7	-	ASON01	107	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441610	GCA_000405725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/725/GCA_000405725.1_ASM40572v1	23851394	SCGC AAA252-J09
Thaumarchaeota archaeon SCGC AB-179-E04	1104571	PRJNA192508	192508	TACK group	Thaumarchaeota	0.29149	45.9	-	ASPK01	20	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440928	GCA_000405745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/745/GCA_000405745.1_ASM40574v1	23851394	SCGC AB-179-E04
Aigarchaeota archaeon JGI 0000001-B8	1052839	PRJNA192537	192537	TACK group	Thaumarchaeota	0.373687	62.2	-	ASPG01	36	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440926	GCA_000405765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/765/GCA_000405765.1_ASM40576v1	23851394	JGI 0000001-B8
Aminicenantes bacterium SCGC AAA252-K07	1047026	PRJNA192403	192403	unclassified Bacteria	Bacteria candidate phyla	1.83055	39.1	-	ASOQ01	122	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440930	GCA_000405785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/785/GCA_000405785.1_ASM40578v1	23851394	SCGC AAA252-K07
Cloacimonetes bacterium JGI 0000014-D18	1130346	PRJNA192223	192223	FCB group	Candidatus Cloacimonetes	0.63106	33	-	ASPM01	43	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440929	GCA_000405845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/845/GCA_000405845.1_ASM40584v1	23851394	JGI 0000014-D18
Thermotogae bacterium JGI 0000106-O11	1130327	PRJNA192506	192506	Thermotogae	unclassified Thermotogae	0.343694	39	-	ASPL01	33	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441259	GCA_000405865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/865/GCA_000405865.1_ASM40586v1	23851394	JGI 0000106-O11
Aigarchaeota archaeon SCGC AAA471-F17	1052829	PRJNA192307	192307	TACK group	Thaumarchaeota	0.741841	62.1	-	ASPD01	43	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440937	GCA_000405905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/905/GCA_000405905.1_ASM40590v1	23851394	SCGC AAA471-F17
Aigarchaeota archaeon SCGC AAA471-I13	1052831	PRJNA192309	192309	TACK group	Thaumarchaeota	0.164795	61.2	-	ASPE01	18	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441257	GCA_000405925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/925/GCA_000405925.1_ASM40592v1	23851394	SCGC AAA471-I13
Candidatus Omnitrophus fodinae SCGC AAA011-A17	699264	PRJNA192480	192480	PVC group	Candidatus Omnitrophica	2.03708	49.6	-	ASOC01	150	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440945	GCA_000405945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/945/GCA_000405945.1_ASM40594v1	23851394	SCGC AAA011-A17
Aminicenantes bacterium SCGC AAA252-O03	910040	PRJNA192226	192226	unclassified Bacteria	Bacteria candidate phyla	1.06598	39.5	-	ASOD01	90	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440551	GCA_000405965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/965/GCA_000405965.1_ASM40596v1	23851394	SCGC AAA252-O03
Atribacteria bacterium SCGC AB-164-M20	1104600	PRJNA192305	192305	unclassified Bacteria	Bacteria candidate phyla	0.497803	33.9	-	ASZL01	37	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440923	GCA_000405985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/985/GCA_000405985.1_ASM40598v1	23851394	SCGC AB-164-M20
Candidatus Poribacteria bacterium WGA-3G	1104566	PRJNA202344	202344	unclassified Bacteria	Bacteria candidate phyla	5.44155	47.8	-	ASZN01	286	-	-	6/3/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441253	GCA_000406005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/005/GCA_000406005.1_ASM40600v1	23842652	WGA-3G
Candidatus Poribacteria bacterium WGA-4CII	1104565	PRJNA202343	202343	unclassified Bacteria	Bacteria candidate phyla	0.543453	47.7	-	ASZM01	44	-	-	6/3/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440924	GCA_000406025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/025/GCA_000406025.1_ASM40602v1	23842652	WGA-4CII
Lachnospiraceae bacterium 3-2	1235799	PRJNA175993	175993	Terrabacteria group	Firmicutes	4.45562	45	-	ASTE01	4	4235	4009	5/29/13	4/8/17	Scaffold	Broad Institute	SAMN01731001	GCA_000403475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/475/GCA_000403475.2_Lach_bact_3-2_V1	-	2-Mar
Lachnospiraceae bacterium 10-1	1235800	PRJNA175994	175994	Terrabacteria group	Firmicutes	4.57165	41.1	-	ASTF01	25	4353	4145	5/29/13	4/8/17	Scaffold	Broad Institute	SAMN01731002	GCA_000403495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/495/GCA_000403495.2_Lach_bact_10-1_V1	-	1-Oct
Nanoarchaeota archaeon SCGC AAA011-G17	1104577	PRJNA192509	192509	DPANN group	Nanoarchaeota	1.02122	32.1	-	AQRL01	38	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440388	GCA_000402515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/515/GCA_000402515.1_ASM40251v1	23851394	SCGC AAA011-G17
Nanoarchaeota archaeon SCGC AAA011-L15	1104580	PRJNA192501	192501	DPANN group	Nanoarchaeota	0.204081	33	-	AQRM01	17	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440389	GCA_000402475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/475/GCA_000402475.1_ASM40247v1	23851394	SCGC AAA011-L15
Latescibacteria bacterium SCGC AAA257-K07	1047066	PRJNA192499	192499	FCB group	Candidatus Latescibacteria	1.77147	42.1	-	AQRO01	120	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441746	GCA_000402435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/435/GCA_000402435.1_ASM40243v1	23851394	SCGC AAA257-K07
Cloacimonetes bacterium JGI 0000014-D06	1130345	PRJNA192489	192489	FCB group	Candidatus Cloacimonetes	1.10916	32.9	-	AQRP01	91	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441747	GCA_000402415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/415/GCA_000402415.1_ASM40241v1	23851394	JGI 0000014-D06
Microgenomates bacterium SCGC AAA011-M05	1104609	PRJNA192479	192479	unclassified Bacteria	Bacteria candidate phyla	0.39093	37.4	-	AQRQ01	17	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441409	GCA_000402395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/395/GCA_000402395.1_ASM40239v1	23851394	SCGC AAA011-M05
Atribacteria bacterium JGI 0000079-F20	1104604	PRJNA192478	192478	unclassified Bacteria	Bacteria candidate phyla	0.719583	37.4	-	AQRR01	43	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441748	GCA_000402375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/375/GCA_000402375.1_ASM40237v1	23851394	JGI 0000079-F20
Candidatus Iainarchaeum andersonii SCGC AAA011-E11	1104576	PRJNA192465	192465	DPANN group	Candidatus Diapherotrites	1.09804	47.4	-	AQRS01	43	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441399	GCA_000402355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/355/GCA_000402355.1_ASM40235v1	23851394	SCGC AAA011-E11
Aerophobetes bacterium JGI 0000014-C22	1104573	PRJNA192464	192464	unclassified Bacteria	Bacteria candidate phyla	0.428566	38.9	-	AQRT01	51	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441066	GCA_000402335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/335/GCA_000402335.1_ASM40233v1	23851394	JGI 0000014-C22
Fervidibacteria bacterium JGI 0000054-H05	1052814	PRJNA192414	192414	unclassified Bacteria	Bacteria candidate phyla	0.289531	50.1	-	AQRU01	46	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441400	GCA_000402315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/315/GCA_000402315.1_ASM40231v1	23851394	JGI 0000054-H05
Hydrogenedentes bacterium JGI 0000059-N10	1046983	PRJNA192411	192411	FCB group	Candidatus Hydrogenedentes	1.20029	37	-	AQRV01	72	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441401	GCA_000402275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/275/GCA_000402275.1_ASM40227v1	23851394	JGI 0000059-N10
Candidatus Aerophobus profundus SCGC AAA252-L23	913320	PRJNA192396	192396	unclassified Bacteria	Bacteria candidate phyla	2.30596	43.4	-	AQRW01	190	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441749	GCA_000402295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/295/GCA_000402295.1_ASM40229v1	23851394	SCGC AAA252-L23
Microgenomates bacterium SCGC AAA011-L05	1104615	PRJNA192395	192395	unclassified Bacteria	Bacteria candidate phyla	0.485374	34.2	-	AQRX01	18	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441067	GCA_000402875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/875/GCA_000402875.1_ASM40287v1	23851394	SCGC AAA011-L05
Atribacteria bacterium SCGC AB-164-G04	1104599	PRJNA192393	192393	unclassified Bacteria	Bacteria candidate phyla	0.329112	34.1	-	AQRY01	27	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441068	GCA_000402855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/855/GCA_000402855.1_ASM40285v1	23851394	SCGC AB-164-G04
Synergistetes bacterium JGI 0000079-D21	1104568	PRJNA192391	192391	Synergistetes	unclassified Synergistetes	0.967373	60	-	AQRZ01	58	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440391	GCA_000402835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/835/GCA_000402835.1_ASM40283v1	23851394	JGI 0000079-D21
Nanoarchaeota archaeon SCGC AAA011-K22	1104578	PRJNA192372	192372	DPANN group	Nanoarchaeota	0.57711	32	-	AQSE01	52	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441751	GCA_000402735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/735/GCA_000402735.1_ASM40273v1	23851394	SCGC AAA011-K22
Microgenomates bacterium SCGC AAA011-B20	1104610	PRJNA192369	192369	unclassified Bacteria	Bacteria candidate phyla	0.633002	38.1	-	AQSF01	20	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441752	GCA_000402715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/715/GCA_000402715.1_ASM40271v1	23851394	SCGC AAA011-B20
Aminicenantes bacterium SCGC AAA252-F08	1047018	PRJNA192352	192352	unclassified Bacteria	Bacteria candidate phyla	2.49486	39	-	AQSJ01	213	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440393	GCA_000402635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/635/GCA_000402635.1_ASM40263v1	23851394	SCGC AAA252-F08
Cloacimonetes bacterium SCGC AAA252-E13	913318	PRJNA192349	192349	FCB group	Candidatus Cloacimonetes	3.1711	36.7	-	AQSK01	215	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441071	GCA_000402615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/615/GCA_000402615.1_ASM40261v1	23851394	SCGC AAA252-E13
Candidatus Latescibacter anaerobius SCGC AAA252-E07	910047	PRJNA192348	192348	FCB group	Candidatus Latescibacteria	2.29028	42.1	-	AQSL01	164	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441742	GCA_000403035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/035/GCA_000403035.1_ASM40303v1	23851394	SCGC AAA252-E07
Cloacimonetes bacterium SCGC AAA252-N14	1046965	PRJNA192337	192337	FCB group	Candidatus Cloacimonetes	2.05587	37.1	-	AQSM01	159	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441402	GCA_000403055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/055/GCA_000403055.1_ASM40305v1	23851394	SCGC AAA252-N14
Microgenomates bacterium SCGC AAA011-A19	1104607	PRJNA192333	192333	unclassified Bacteria	Bacteria candidate phyla	0.594449	35.4	-	AQSN01	30	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441743	GCA_000402195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/195/GCA_000402195.1_ASM40219v1	23851394	SCGC AAA011-A19
Cloacimonetes bacterium SCGC AAA252-D03	1046952	PRJNA192329	192329	FCB group	Candidatus Cloacimonetes	1.89377	37	-	AQSO01	179	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441403	GCA_000402215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/215/GCA_000402215.1_ASM40221v1	23851394	SCGC AAA252-D03
Aminicenantes bacterium SCGC AAA252-A02	1047013	PRJNA192324	192324	unclassified Bacteria	Bacteria candidate phyla	2.97077	39.3	-	AQSP01	144	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440394	GCA_000402595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/595/GCA_000402595.1_ASM40259v1	23851394	SCGC AAA252-A02
Caldiserica bacterium JGI 0000059-M03	1047012	PRJNA192323	192323	Caldiserica	unclassified Caldiserica	0.503801	35.1	-	AQSQ01	30	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440395	GCA_000402575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/575/GCA_000402575.1_ASM40257v1	23851394	JGI 0000059-M03
Calescamantes bacterium SCGC AAA471-M6	1052810	PRJNA192314	192314	unclassified Bacteria	Bacteria candidate phyla	1.9143	34.4	-	AQST01	76	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441744	GCA_000403075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/075/GCA_000403075.1_ASM40307v1	23851394	SCGC AAA471-M6
Cloacimonetes bacterium JGI 0000014-H19	1130347	PRJNA192301	192301	FCB group	Candidatus Cloacimonetes	0.868254	31.2	-	AQSV01	105	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441405	GCA_000402175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/175/GCA_000402175.1_ASM40217v1	23851394	JGI 0000014-H19
Atribacteria bacterium SCGC AB-164-A22	1104601	PRJNA192300	192300	unclassified Bacteria	Bacteria candidate phyla	0.939094	34.6	-	AQSW01	83	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440398	GCA_000402235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/235/GCA_000402235.1_ASM40223v1	23851394	SCGC AB-164-A22
Omnitrophica bacterium SCGC AAA257-O07	1047007	PRJNA192289	192289	PVC group	Candidatus Omnitrophica	0.767845	46.1	-	AQSZ01	60	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441406	GCA_000402985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/985/GCA_000402985.1_ASM40298v1	23851394	SCGC AAA257-O07
Aigarchaeota archaeon SCGC AAA471-E14	1052827	PRJNA192288	192288	TACK group	Thaumarchaeota	0.703726	54.8	-	AQTA01	58	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441745	GCA_000402965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/965/GCA_000402965.1_ASM40296v1	23851394	SCGC AAA471-E14
Aigarchaeota archaeon SCGC AAA471-D15	1052826	PRJNA192287	192287	TACK group	Thaumarchaeota	0.667371	61.8	-	AQTB01	53	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440400	GCA_000402915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/915/GCA_000402915.1_ASM40291v1	23851394	SCGC AAA471-D15
Aigarchaeota archaeon SCGC AAA471-B22	1052825	PRJNA192283	192283	TACK group	Thaumarchaeota	0.267561	61.6	-	AQTD01	17	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441064	GCA_000402935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/935/GCA_000402935.1_ASM40293v1	23851394	SCGC AAA471-B22
Calescamantes bacterium JGI 0000106-G12	1130329	PRJNA192225	192225	unclassified Bacteria	Bacteria candidate phyla	2.24417	33.8	-	AQTE01	138	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440402	GCA_000402115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/115/GCA_000402115.1_ASM40211v1	23851394	JGI 0000106-G12
Nanoarchaeota archaeon SCGC AAA011-J2	1302614	PRJNA192224	192224	DPANN group	Nanoarchaeota	0.29949	32.1	-	AQTF01	25	-	-	5/29/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02441065	GCA_000402255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/255/GCA_000402255.1_ASM40225v1	23851394	SCGC AAA011-J02
Lachnospiraceae bacterium A4	397291	PRJNA175979	175979	Terrabacteria group	Firmicutes	6.9619	44.6	-	ASSR01	40	6505	6026	5/29/13	4/17/17	Scaffold	Broad Institute	SAMN01730988	GCA_000403215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/215/GCA_000403215.2_Lach_bact_A4_V1	-	A4
Lachnospiraceae bacterium 3-1	397288	PRJNA175981	175981	Terrabacteria group	Firmicutes	5.08316	42.4	-	ASST01	27	5159	4818	5/29/13	4/17/17	Scaffold	Broad Institute	SAMN01730990	GCA_000403255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/255/GCA_000403255.2_Lach_bact_3-1_V1	-	1-Mar
Lachnospiraceae bacterium 28-4	397287	PRJNA175982	175982	Terrabacteria group	Firmicutes	4.28353	45.1	-	ASSU01	7	4125	3929	5/29/13	4/17/17	Scaffold	Broad Institute	SAMN01730991	GCA_000403275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/275/GCA_000403275.2_Lach_bact_28-4_V1	-	28-4
Lachnospiraceae bacterium M18-1	1235792	PRJNA175983	175983	Terrabacteria group	Firmicutes	5.79909	47.2	-	ASSV01	12	5391	5081	5/29/13	4/8/17	Scaffold	Broad Institute	SAMN01730992	GCA_000403295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/295/GCA_000403295.2_Lach_bact_M18-1_V1	-	M18-1
Lachnospiraceae bacterium COE1	1235793	PRJNA175984	175984	Terrabacteria group	Firmicutes	4.96761	44.2	-	ASSW01	19	4669	4330	5/29/13	4/8/17	Scaffold	Broad Institute	SAMN01730993	GCA_000403335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/335/GCA_000403335.2_Lach_bact_COE1_V1	-	COE1
Lachnospiraceae bacterium A2	397290	PRJNA175985	175985	Terrabacteria group	Firmicutes	5.23893	46.6	-	ASSX01	10	5302	4898	5/29/13	4/17/17	Scaffold	Broad Institute	SAMN01730994	GCA_000403315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/315/GCA_000403315.2_Lach_bact_A2_V1	-	A2
Deinococcus puniceus	1182568	PRJNA272727	272727	Terrabacteria group	Deinococcus-Thermus	2.97198	62.6	chromosome:NZ_CP011387.1/CP011387.1	-	1	2771	2681	5/16/16	4/12/17	Complete Genome	Seoul Women's University	SAMN03285365	GCA_001644565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/565/GCA_001644565.1_ASM164456v1	-	DY1
Bifidobacterium bifidum	1681	PRJNA270902	270902	Terrabacteria group	Actinobacteria	2.21037	62.6	chromosome:NZ_CP010412.1/CP010412.1	-	1	1861	1696	9/14/15	4/4/17	Complete Genome	Yonsei University	SAMN03271680	GCA_001281345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/345/GCA_001281345.1_ASM128134v1	-	BF3
Pacificimonas flava	1234595	PRJNA175614	175614	Proteobacteria	Alphaproteobacteria	3.25393	64.2	-	AMRV01	38	3033	2916	2/21/13	3/2/17	Contig	"State Key Laboratory for Marine Environmental Science, Xiamen University, Xiamen, FuJian 361005, P.R. China"	SAMN02472131	GCA_000342165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/165/GCA_000342165.1_Alphaproteobacteria-version1	23661488	JLT2015
Candidatus Halobonum tyrrellensis G22	1324957	PRJNA198495	198495	Euryarchaeota	Halobacteria	3.67509	70.1	-	ASGZ01	72	3492	3293	11/5/13	3/29/17	Contig	"Scripps Institution of Oceanography, UC San Diego"	SAMN02471691	GCA_000495475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/475/GCA_000495475.1_Htyrrel1.0	24336364	G22
Pandoraea apista	93218	PRJNA284212	284212	Proteobacteria	Betaproteobacteria	5.57486	62.6	chromosome:NZ_CP011501.1/CP011501.1	-	1	4974	4828	6/3/15	4/10/17	Complete Genome	UCSF	SAMN03699824	GCA_001027265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/265/GCA_001027265.1_ASM102726v1	-	AU2161
Betaproteobacteria bacterium MOLA814	1408164	PRJNA222779	222779	Proteobacteria	Betaproteobacteria	2.85971	53.6	-	AYMW01	3	2700	2601	11/12/13	4/9/17	Scaffold	Observatoire Oceanologique de Banyuls-sur-Mer	SAMN02470758	GCA_000496475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/475/GCA_000496475.1_MOLA814_draft3	24356832	MOLA814
Pandoraea apista	93218	PRJNA281013	281013	Proteobacteria	Betaproteobacteria	5.60964	62.6	chromosome:NZ_CP011279.1/CP011279.1	-	1	5011	4867	5/20/15	4/10/17	Complete Genome	UCSF	SAMN03481316	GCA_001010785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/785/GCA_001010785.1_ASM101078v1	-	TF80G25
Pandoraea apista	93218	PRJNA271830	271830	Proteobacteria	Betaproteobacteria	5.5821	62.6	chromosome:CP010518.3	-	1	4977	4674	1/21/15	4/15/15	Complete Genome	UCSF	SAMN03278108	GCA_000826965.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/965/GCA_000826965.3_ASM82696v3	-	TF81F4
Alcanivorax pacificus W11-5	391936	PRJNA88101	88101	Proteobacteria	Gammaproteobacteria	4.16843	62.6	chromosome:NZ_CP004387.1/CP004387.1	-	1	3770	3669	1/9/15	4/10/17	Complete Genome	"The Third Institute of State Oceanic Administration (SOA), China."	SAMN02471159	GCA_000299335.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/335/GCA_000299335.2_ASM29933v2	23209202	W11-5
Exiguobacterium chiriqhucha RW-2	1345023	PRJNA208114	208114	Terrabacteria group	Firmicutes	3.0195	52	-	ATCL01	23	3079	3022	7/1/13	6/5/17	Contig	University of British Columbia	SAMN02471612	GCA_000416965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/965/GCA_000416965.1_23.K55	23929485	RW-2
Sphingobacterium paucimobilis HER1398	1346330	PRJNA208215	208215	FCB group	Bacteroidetes/Chlorobi group	5.12636	40.9	-	ATDL01	23	4345	4214	7/1/13	4/8/17	Contig	University of British Columbia	SAMN02471610	GCA_000416985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/985/GCA_000416985.1_23.k55	23929486	HER1398
Pseudomonas chlororaphis	587753	PRJNA247768	247768	Proteobacteria	Gammaproteobacteria	7.12217	62.6	chromosome:NZ_CP008696.1/CP008696.1	-	1	6502	6303	6/6/14	4/2/17	Complete Genome	University of Manitoba	SAMN02780900	GCA_000698865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/865/GCA_000698865.1_ASM69886v1	25035328	PA23
Mycobacterium iranicum	912594	PRJNA299467	299467	Terrabacteria group	Actinobacteria	6.33565	66.1	-	LQPC01	82	6075	5861	4/20/17	4/22/17	Contig	University of Trento	SAMN04216933	GCA_002101705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/705/GCA_002101705.1_ASM210170v1	-	DSM 45541
Thiocystis violascens DSM 198	765911	PRJNA60641	60641	Proteobacteria	Gammaproteobacteria	5.01707	62.6	chromosome:NC_018012.1/CP003154.1	-	1	4555	4317	6/8/12	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02232062	GCA_000227745.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/745/GCA_000227745.3_ASM22774v3	-	DSM 198
Clostridioides mangenotii LM2	1392497	PRJNA217198	217198	Terrabacteria group	Firmicutes	3.02379	31.6	-	JIAA01	1	2923	2719	4/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743901	GCA_000687955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/955/GCA_000687955.1_ASM68795v1	-	LM2
Bifidobacterium bifidum BGN4	484020	PRJNA21077	21077	Terrabacteria group	Actinobacteria	2.22366	62.6	chromosome:NC_017999.1/CP001361.1	-	1	1872	1727	6/5/12	3/30/17	Complete Genome	Korea Research Institute of Bioscience and Biotechnology (KRIBB)	SAMN02603486	GCA_000265095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/095/GCA_000265095.1_ASM26509v1	22887663	BGN4
Lentibacillus jeotgali	558169	PRJNA71453	71453	Terrabacteria group	Firmicutes	3.77582	42.5	-	AGAV01	31	3732	3575	8/31/11	4/17/17	Contig	Kyung Hee University	SAMN02470213	GCA_000224785.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/785/GCA_000224785.2_ASM22478v2	-	Grbi
Pseudodesulfovibrio aespoeensis Aspo-2	643562	PRJNA37869	37869	Proteobacteria	delta/epsilon subdivisions	3.62911	62.6	chromosome:NC_014844.1/CP002431.1	-	1	3370	3257	1/4/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713573	GCA_000176915.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/915/GCA_000176915.2_ASM17691v2	24874683	Aspo-2
Mesorhizobium ciceri biovar biserrulae WSM1271	765698	PRJNA48991	48991	Proteobacteria	Alphaproteobacteria	6.69003	62.5728	chromosome:NC_014923.1/CP002447.1; plasmid pMESCI01:NC_014918.1/CP002448.1	-	2	6532	6264	1/7/11	8/3/16	Complete Genome	US DOE Joint Genome Institute	SAMN00713576	GCA_000185905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/905/GCA_000185905.1_ASM18590v1	-	WSM1271
Bradyrhizobium yuanmingense	108015	PRJNA295775	295775	Proteobacteria	Alphaproteobacteria	7.90431	63.9	-	LJYF01	55	7318	6847	11/6/15	4/11/17	Scaffold	Embrapa Agrobiologia	SAMN04088257	GCA_001439885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/885/GCA_001439885.1_ABySSBR3267	-	BR3267
Pseudomonas putida HB3267	1215088	PRJNA171349	171349	Proteobacteria	Gammaproteobacteria	5.95611	62.5649	chromosome:NC_019905.1/CP003738.1; plasmid pPC9:NC_019906.1/CP003739.1	-	2	5583	5363	12/19/12	5/19/17	Complete Genome	Universidad de Huelva	SAMN02604102	GCA_000325725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/725/GCA_000325725.1_ASM32572v1	24465371	PC9
Rickettsia gravesii BWI-1	1397702	PRJNA218069	218069	Proteobacteria	Alphaproteobacteria	1.3475	32.2	-	AWXL01	29	1598	1193	10/29/13	9/4/17	Contig	URMITE	SAMN02472051	GCA_000485845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/845/GCA_000485845.1_RicGra1.0	24285646	BWI-1
Brucella inopinata BO1	470735	PRJNA41855	41855	Proteobacteria	Alphaproteobacteria	3.36677	57.1	-	ADEZ01	55	3390	3161	9/3/10	4/7/17	Contig	"Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA"	SAMN02472076	GCA_000182725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/182/725/GCA_000182725.1_ASM18272v1	-	BO1
Parvimonas sp. KA00067	1588755	PRJNA272073	272073	Terrabacteria group	Firmicutes	1.54191	28.8	-	LSDF01	19	1489	1401	2/8/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN03854354	GCA_001553085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/085/GCA_001553085.1_ASM155308v1	-	KA00067
Ensifer sojae CCBAU 05684	716928	PRJNA77219	77219	Proteobacteria	Alphaproteobacteria	5.96434	62	-	AJQT01	231	5802	5353	5/3/12	5/18/17	Contig	China Agricultural University	SAMN02469481	GCA_000261485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/485/GCA_000261485.1_05684	22586130	CCBAU 05684
Poinsettia branch-inducing phytoplasma str. JR1	1196416	PRJNA167147	167147	Terrabacteria group	Tenericutes	0.63144	27.3	-	AKIK01	185	604	527	10/1/12	4/17/17	Contig	Università di Udine	SAMN01041249	GCA_000309465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/465/GCA_000309465.1_ASM30946v1	22936033	JR1
Milkweed yellows phytoplasma str. MW1	1196417	PRJNA167147	167147	Terrabacteria group	Tenericutes	0.583806	27.4	-	AKIL01	158	512	455	10/1/12	4/17/17	Contig	Università di Udine	SAMN01041251	GCA_000309485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/485/GCA_000309485.1_ASM30948v1	22936033	MW1
Italian clover phyllody phytoplasma str. MA1	1196421	PRJNA167147	167147	Terrabacteria group	Tenericutes	0.597245	27.1	-	AKIM01	197	592	509	10/1/12	4/17/17	Contig	Università di Udine	SAMN01041250	GCA_000300695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/695/GCA_000300695.1_ASM30069v1	22936033	MA1
Vaccinium witches'-broom phytoplasma str. VAC	1196419	PRJNA167147	167147	Terrabacteria group	Tenericutes	0.647754	27.3	-	AKIN01	272	583	510	10/1/12	4/17/17	Contig	Università di Udine	SAMN01041252	GCA_000309405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/405/GCA_000309405.1_ASM30940v1	22936033	VAC
Methanobrevibacter boviskoreani JH1	1214066	PRJDB198	171363	Euryarchaeota	Methanobacteria	2.0458	29	-	BAGX02	54	1770	1706	8/29/12	4/8/17	Contig	Korea Research Institute of Bioscience and Biotechnology	SAMD00036626	GCA_000320505.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/320/505/GCA_000320505.2_ASM32050v2	23469331	JH1
Kallipyga massiliensis ph2	1118059	PRJEA82277	82277	Terrabacteria group	Firmicutes	1.77067	51.3	-	CAHC01	3	1644	1544	5/30/12	4/8/17	Scaffold	URMITE CNRS UMR 6236 IRD 198	SAMEA2272041	GCA_000311985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/985/GCA_000311985.1_ASM31198v1	-	ph2
Bacillus massiliosenegalensis JC6	1034347	PRJEA68337	68337	Terrabacteria group	Firmicutes	4.96791	37.7	-	CAHJ01	24	4937	4730	6/1/12	6/15/17	Scaffold	laboratoire URMITE	SAMEA2272328	GCA_000311725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/725/GCA_000311725.1_ASM31172v1	-	-
Casaltella massiliensis	938278	PRJEB70	169203	Terrabacteria group	Firmicutes	2.37524	36	-	CAJO01	35	2222	2032	7/25/12	4/17/17	Scaffold	URMITE	SAMEA2272377	GCA_000312325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/325/GCA_000312325.1_ASM31232v1	-	9400853
Agrococcus pavilionensis RW1	1330458	PRJNA201450	201450	Terrabacteria group	Actinobacteria	2.8784	72.6	-	ASHR01	50	2804	2681	5/20/13	4/8/17	Contig	University of British Columbia	SAMN02471611	GCA_000400485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/485/GCA_000400485.1_k0-k1250	23814108	RW1
Thalassobacillus devorans MSP14	1401258	PRJNA219316	219316	Terrabacteria group	Firmicutes	3.93513	42.9	-	AWXW01	9	3880	3779	11/14/13	4/17/17	Scaffold	Directorate of Groundnut Research (Indian Council of Agricultural Research)	SAMN02469736	GCA_000496835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/835/GCA_000496835.1_GS_De_Novo	24371204	MSP14
Streptomycetaceae bacterium MP113-05	1380770	PRJNA213851	213851	Terrabacteria group	Actinobacteria	5.96165	70	-	AWQV01	75	5258	4373	11/19/13	4/9/17	Scaffold	Norwegian University of Science and Technology	SAMN02469389	GCA_000497405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/405/GCA_000497405.1_v1	-	MP113-05
Aliihoeflea sp. 2WW	1381123	PRJNA214034	214034	Proteobacteria	Alphaproteobacteria	4.14324	64.4	-	AYOD01	73	4089	3975	11/20/13	4/9/17	Contig	University of Amsterdam	SAMN02299295	GCA_000497755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/755/GCA_000497755.1_Alii2WW1	24356838	2WW
gamma proteobacterium L18	1229486	PRJNA174215	174215	Proteobacteria	Gammaproteobacteria	6.85447	62.5	-	AUYO01	26	6025	5727	11/20/13	4/9/17	Scaffold	University of Notre Dame	SAMN02471199	GCA_000497835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/835/GCA_000497835.1_L18_assembly_1.0	-	L18
Rhodoferax saidenbachensis ED16	614083	PRJNA215140	215140	Proteobacteria	Betaproteobacteria	4.24939	60.9	-	AWQR01	70	4057	3920	11/22/13	4/9/17	Contig	National Veterinary Institute of Sweden	SAMN02316608	GCA_000498435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/435/GCA_000498435.1_ED16	24408525	ED16
Pseudomonas taeanensis MS-3	1395571	PRJNA217843	217843	Proteobacteria	Gammaproteobacteria	5.45486	60.9	-	AWSQ01	18	4926	4752	11/22/13	4/16/17	Contig	Korea Basic Science Institute	SAMN02470138	GCA_000498575.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/575/GCA_000498575.2_MS-3	24407626	MS-3
Halalkalicoccus jeotgali B3	795797	PRJNA49517	49517	Euryarchaeota	Halobacteria	3.69865	62.5582	chromosome:NC_014297.1/CP002062.1; plasmid 2:NC_014299.1/CP002064.1; plasmid 3:NC_014300.1/CP002065.1; plasmid 4:NC_014301.1/CP002066.1; plasmid 5:NC_014302.1/CP002067.1; plasmid 6:NC_014303.1/CP002068.1; plasmid 1:NC_014298.1/CP002063.1	-	7	3810	3679	6/23/10	4/7/17	Complete Genome	Kyung Hee University	SAMN02603490	GCA_000196895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/895/GCA_000196895.1_ASM19689v1	20601480	B3
Bacteroides neonati	1347393	PRJEB4701	225909	FCB group	Bacteroidetes/Chlorobi group	5.02533	43.5	-	CBVB01	18	4307	4129	10/30/13	4/9/17	Scaffold	URMITE	SAMEA3138831	GCA_000499785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/785/GCA_000499785.1_BNeo1	-	MS4
Borrelia persica No12	1417230	PRJNA226261	226261	Spirochaetes	Spirochaetia	1.78498	28.9	-	AYOT01	245	1647	1418	11/27/13	4/17/17	Contig	Umea university	SAMN02471306	GCA_000500045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/045/GCA_000500045.1_AB6.5.1	24407639	No12
Borrelia hispanica CRI	1417229	PRJNA226260	226260	Spirochaetes	Spirochaetia	1.78385	28.1	-	AYOU01	168	1790	1542	11/27/13	4/17/17	Contig	Umea university	SAMN02471307	GCA_000500065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/065/GCA_000500065.1_AB2	24435869	CRI
Algoriphagus machipongonensis	388413	PRJNA18947	18947	FCB group	Bacteroidetes/Chlorobi group	4.78772	38.7	chromosome:NZ_CM001023.1/CM001023.1	AAXU02	1	8074	7904	3/6/07	5/18/17	Chromosome	Gordon and Betty Moore Foundation Microbial Genome Sequencing Project	SAMN02436092	GCA_000166275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/275/GCA_000166275.1_ASM16627v1	21183675	PR1
Ruegeria conchae	981384	PRJNA63203	63203	Proteobacteria	Alphaproteobacteria	4.49041	55.7	-	AEYW01	28	4375	4263	3/15/11	5/19/17	Contig	Kyung Hee University	SAMN02470214	GCA_000192475.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/475/GCA_000192475.2_ASM19247v1	21551304	TW15
Patulibacter medicamentivorans	1097667	PRJNA74503	74503	Terrabacteria group	Actinobacteria	5.0925	74.1	-	AGUD01	353	4692	4327	12/28/11	5/19/17	Contig	Aalborg University	SAMN02391504	GCA_000240225.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/225/GCA_000240225.2_ASM24022v2	23212173	I11
Paraburkholderia caribensis	75105	PRJNA294731	294731	Proteobacteria	Betaproteobacteria	9.03212	62.5464	chromosome 1:NZ_CP013102.1/CP013102.1; chromosome 2:NZ_CP013103.1/CP013103.1; plasmid 1:NZ_CP013104.1/CP013104.1; plasmid 2:NZ_CP013105.1/CP013105.1	-	4	8066	7731	11/24/15	4/11/17	Complete Genome	University of Hong Kong	SAMN04031629	GCA_001449005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/005/GCA_001449005.1_ASM144900v1	26823586	MWAP64
Mesorhizobium ciceri biovar biserrulae	278148	PRJNA317273	317273	Proteobacteria	Alphaproteobacteria	6.88045	62.5149	chromosome:NZ_CP015064.1/CP015064.1; plasmid pMc1284:NZ_CP015065.1/CP015065.1	-	2	6690	6410	4/12/16	4/12/17	Complete Genome	Murdoch University	SAMN04604739	GCA_001618845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/845/GCA_001618845.1_ASM161884v1	27284134	WSM1284
Pseudomonas putida	303	PRJNA357031	357031	Proteobacteria	Gammaproteobacteria	6.13702	62.5	chromosome:NZ_CP018846.1/CP018846.1	-	1	5542	5338	3/13/17	3/15/17	Complete Genome	Harvard University	SAMN06130965	GCA_002025705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/705/GCA_002025705.1_ASM202570v1	28275097	AA7
Kurthia massiliensis	1033739	PRJEA70831	70831	Terrabacteria group	Firmicutes	3.23082	39.3	-	CAEU01	63	3215	3103	2/28/12	4/17/17	Scaffold	laboratoire URMITE CNRS 6236	SAMEA2272071	GCA_000285555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/555/GCA_000285555.1_ASM28555v1	-	JC30T
Gillisia marina	1167637	PRJNA156695	156695	FCB group	Bacteroidetes/Chlorobi group	2.9814	34.9	-	AJLT01	116	2798	2424	4/13/12	4/7/17	Contig	Korea Basic Science Institute (KBSI)	SAMN02470140	GCA_000258765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/765/GCA_000258765.1_CBA3202_1.0	22740667	CBA3202
Thiomonas arsenitoxydans	426114	PRJEA50687	50687	Proteobacteria	Betaproteobacteria	3.78553	63.7592	chromosome:NC_014145.1/FP475956.1; plasmid pTHI:NC_014144.1/FP475957.1	-	2	3616	3497	4/7/10	4/17/17	Chromosome	"Génétique Moléculaire, Génomique et Microbiologie UMR 7156 ULP - CNRS Université Louis Pasteur"	SAMEA2272520	GCA_000253115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/115/GCA_000253115.1_ASM25311v1	-	3As
Levyella massiliensis	938289	PRJEB62	169191	Terrabacteria group	Firmicutes	1.7139	48.8	-	CAJN02	4	1552	1446	7/25/12	4/17/17	Scaffold	URMITE	SAMEA2272361	GCA_000308275.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/275/GCA_000308275.2_LM2	-	9403326
Legionella tunisiensis	1034944	PRJEB109	169210	Proteobacteria	Gammaproteobacteria	3.37475	39.9	-	CALJ01	340	3808	2616	7/31/12	4/17/17	Contig	URMITE	SAMEA2271965	GCA_000308315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/315/GCA_000308315.1_ASM30831v1	-	LegM
Pseudomonas alcaliphila JAB1	741155	PRJNA104953	104953	Proteobacteria	Gammaproteobacteria	5.34029	62.5	chromosome:NZ_CP016162.1/CP016162.1	-	1	4975	4785	1/10/17	4/17/17	Complete Genome	Institute of Molecular Genetics of the ASCR	SAMN03784977	GCA_001941865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/865/GCA_001941865.1_ASM194186v1	-	JAB1
Rhodobacteraceae bacterium PD-2	1169855	PRJNA217506	217506	Proteobacteria	Alphaproteobacteria	5.23234	65.9	-	AWRV02	424	4801	4601	12/5/13	4/10/17	Scaffold	"First Institute of Oceanography, SOA"	SAMN02339386	GCA_000504185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/185/GCA_000504185.2_ASM50418v2	25700405	PD-2
actinobacterium SCGC AAA041-L13	932042	PRJNA183355	183355	Terrabacteria group	Actinobacteria	1.38162	44.2	-	AZHS01	103	-	-	12/9/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02597173	GCA_000504645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/645/GCA_000504645.1_ASM50464v1	-	SCGC AAA041-L13
Parcubacteria bacterium RAAC4_OD1_1	1394712	PRJNA216121	216121	unclassified Bacteria	Bacteria candidate phyla	0.69353	31.2	-	AWSN01	1	723	686	12/9/13	12/9/13	Contig	"University of California, Berkeley"	SAMN00998488	GCA_000505065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/065/GCA_000505065.1_RAAC_OD1_1.0	-	-
Kurthia huakuii LAM0618	1334046	PRJNA227399	227399	Terrabacteria group	Firmicutes	3.54892	39.9	-	AYTB01	56	3595	3378	12/10/13	4/9/17	Contig	"Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences"	SAMN02469947	GCA_000505545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/545/GCA_000505545.1_draft_genome_sequence_of_Kurthia_huakuii_LAM0618	24435864	LAM0618
Galbibacter marinus	555500	PRJNA170404	170404	FCB group	Bacteroidetes/Chlorobi group	3.57245	37	-	AMSG01	80	3156	3040	10/2/12	4/17/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02471163	GCA_000300875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/875/GCA_000300875.1_ASM30087v1	23209227	ck-I2-15
Bacillus tequilensis KCTC 13622	1423686	PRJNA227791	227791	Terrabacteria group	Firmicutes	3.9813	43.9	-	AYTO01	51	4234	3991	12/12/13	4/9/17	Contig	KRIBB	SAMN02414603	GCA_000507145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/507/145/GCA_000507145.1_KCTC_13622_01	-	KCTC 13622
Clostridiales bacterium VE202-01	1232438	PRJDB521	231332	Terrabacteria group	Firmicutes	3.13652	30.6	-	BAHP02	225	2931	2499	7/12/13	4/9/17	Contig	The University of Tokyo	SAMD00013706	GCA_000508865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/865/GCA_000508865.1_ASM50886v1	23842501	VE202-01
Clostridiales bacterium VE202-03	1232439	PRJDB522	231314	Terrabacteria group	Firmicutes	4.56918	59.2	-	BAHQ02	907	4756	3818	7/12/13	4/9/17	Contig	The University of Tokyo	SAMD00003479	GCA_000508885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/885/GCA_000508885.1_ASM50888v1	23842501	VE202-03
Hungatella hathewayi VE202-04	1232440	PRJDB523	231333	Terrabacteria group	Firmicutes	7.33215	49.1	-	BAHR02	274	6698	6181	7/12/13	4/10/17	Contig	The University of Tokyo	SAMD00008809	GCA_000508905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/905/GCA_000508905.1_ASM50890v1	23842501	VE202-04
Clostridiales bacterium VE202-06	1232442	PRJDB525	231334	Terrabacteria group	Firmicutes	5.98805	45.5	-	BAHT02	327	5541	5016	7/12/13	4/9/17	Contig	The University of Tokyo	SAMD00012241	GCA_000508925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/925/GCA_000508925.1_ASM50892v1	23842501	VE202-06
Clostridiales bacterium VE202-07	1232448	PRJDB526	231335	Terrabacteria group	Firmicutes	6.03055	49.5	-	BAHU02	47	-	-	7/12/13	10/31/15	Contig	The University of Tokyo	SAMD00012186	GCA_000508945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/945/GCA_000508945.1_ASM50894v1	23842501	VE202-07
Clostridiales bacterium VE202-08	1232449	PRJDB527	231336	Terrabacteria group	Firmicutes	3.3576	40.5	-	BAHV02	37	3303	3196	7/12/13	4/9/17	Contig	The University of Tokyo	SAMD00006264	GCA_000508965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/965/GCA_000508965.1_ASM50896v1	23842501	VE202-08
Clostridiales bacterium VE202-09	1232447	PRJDB528	231337	Terrabacteria group	Firmicutes	3.44652	43.4	-	BAHW02	78	3599	3253	7/12/13	4/9/17	Contig	The University of Tokyo	SAMD00004028	GCA_000508985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/985/GCA_000508985.1_ASM50898v1	23842501	VE202-09
Clostridiales bacterium VE202-13	1232443	PRJDB532	231338	Terrabacteria group	Firmicutes	3.47555	54.3	-	BAIA02	193	3716	3121	7/12/13	4/9/17	Contig	The University of Tokyo	SAMD00008618	GCA_000509005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/509/005/GCA_000509005.1_ASM50900v1	23842501	VE202-13
Clostridiales bacterium VE202-14	1232452	PRJDB533	231339	Terrabacteria group	Firmicutes	3.16258	45.3	-	BAIB02	31	3091	2767	7/12/13	10/31/15	Contig	The University of Tokyo	SAMD00003119	GCA_000509025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/509/025/GCA_000509025.1_ASM50902v1	23842501	VE202-14
Clostridiales bacterium VE202-15	1232444	PRJDB534	231340	Terrabacteria group	Firmicutes	6.16803	55.5	-	BAIC02	337	5737	4975	7/12/13	4/9/17	Contig	The University of Tokyo	SAMD00012529	GCA_000509045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/509/045/GCA_000509045.1_ASM50904v1	23842501	VE202-15
Clostridiales bacterium VE202-16	1232445	PRJDB535	231341	Terrabacteria group	Firmicutes	5.19656	47.9	-	BAID02	353	4920	4224	7/12/13	4/9/17	Contig	The University of Tokyo	SAMD00009382	GCA_000509065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/509/065/GCA_000509065.1_ASM50906v1	23842501	VE202-16
Clostridiales bacterium VE202-18	1232446	PRJDB536	231342	Terrabacteria group	Firmicutes	3.55156	31.3	-	BAIE02	103	3454	3026	7/12/13	4/9/17	Contig	The University of Tokyo	SAMD00009094	GCA_000509085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/509/085/GCA_000509085.1_ASM50908v1	23842501	VE202-18
Clostridiales bacterium VE202-21	1232453	PRJDB537	231343	Terrabacteria group	Firmicutes	5.30694	45.9	-	BAIF02	143	4858	4468	7/12/13	4/9/17	Contig	The University of Tokyo	SAMD00012911	GCA_000509105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/509/105/GCA_000509105.1_ASM50910v1	23842501	VE202-21
Clostridiales bacterium VE202-26	1232454	PRJDB540	231345	Terrabacteria group	Firmicutes	3.91523	47.5	-	BAII02	26	3757	3438	7/12/13	4/9/17	Contig	The University of Tokyo	SAMD00009111	GCA_000509125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/509/125/GCA_000509125.1_ASM50912v1	23842501	VE202-26
Clostridiales bacterium VE202-27	1232457	PRJDB541	231346	Terrabacteria group	Firmicutes	7.0728	48	-	BAIJ02	256	6491	5836	7/12/13	4/9/17	Contig	The University of Tokyo	SAMD00012571	GCA_000509145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/509/145/GCA_000509145.1_ASM50914v1	23842501	VE202-27
Clostridiales bacterium VE202-28	1232460	PRJDB542	231347	Terrabacteria group	Firmicutes	6.86008	49.8	-	BAIK02	210	6379	5727	7/12/13	4/9/17	Contig	The University of Tokyo	SAMD00010027	GCA_000509165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/509/165/GCA_000509165.1_ASM50916v1	23842501	VE202-28
Clostridiales bacterium VE202-29	1232458	PRJDB543	231348	Terrabacteria group	Firmicutes	7.41606	46.8	-	BAIL02	245	6619	6085	7/12/13	4/9/17	Contig	The University of Tokyo	SAMD00008692	GCA_000509185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/509/185/GCA_000509185.1_ASM50918v1	23842501	VE202-29
alpha proteobacterium Mf 1.05b.01	1282876	PRJDB736	231709	Proteobacteria	Alphaproteobacteria	3.82423	55.4	-	BAOK01	2	3747	3681	6/11/13	4/9/17	Contig	Okinawa Institute of Science and Technology	SAMD00036664	GCA_000509225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/509/225/GCA_000509225.1_ASM50922v1	-	-
Lactobacillus namurensis DSM 19117	1423773	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.47642	52	-	AZDT01	69	2273	2168	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369490	GCA_001434785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/785/GCA_001434785.1_ASM143478v1	26415554	DSM 19117
Prevotella sp. oral taxon 473 str. F0040	1035197	PRJNA67205	67205	FCB group	Bacteroidetes/Chlorobi group	2.55302	46.1	-	AMEK01	24	1973	1857	12/10/12	4/16/17	Scaffold	Washington University Genome Center	SAMN02436797	GCA_000318095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/095/GCA_000318095.2_ASM31809v2	-	F0040
Rhizobium freirei PRF 81	363754	PRJNA13459	13459	Proteobacteria	Alphaproteobacteria	7.08387	59.9592	plasmid pPRF81a:NZ_AQHN01000095.1/AQHN01000095.1; plasmid pPRF81b:NZ_AQHN01000096.1/AQHN01000096.1	AQHN01	96	6676	6419	4/10/13	5/19/17	Contig	Embrapa	SAMN02470251	GCA_000359745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/745/GCA_000359745.1_Rhizobium_sp.	23270491	PRF 81
Bradyrhizobium liaoningense CCBAU 05525	1128287	PRJNA77219	77219	Proteobacteria	Alphaproteobacteria	8.16412	63.8	-	AJQC01	1040	8111	6957	5/3/12	5/18/17	Contig	China Agricultural University	SAMN02469466	GCA_000261645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/645/GCA_000261645.1_05525	22586130	CCBAU 05525
Gammaproteobacteria bacterium MOLA455	1411685	PRJNA224088	224088	Proteobacteria	Gammaproteobacteria	2.60503	50	-	AZIN01	4	2362	2299	12/26/13	4/9/17	Scaffold	Observatoire Oceanologique de Banyuls-sur-Mer	SAMN02597429	GCA_000511875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/875/GCA_000511875.1_MOLA455_draft2	24482511	MOLA455
Thermoanaerobacterium aotearoense SCUT27	1421016	PRJNA227407	227407	Terrabacteria group	Firmicutes	2.80804	34.9	-	AYSN01	91	2855	2687	12/30/13	4/17/17	Contig	"School of Bioscience and Bioengineering, South China University of Technology"	SAMN02597436	GCA_000512105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/105/GCA_000512105.1_Thermoanaerobacterium_aotearoense_SCUT27_assembly	24526632	SCUT27
Sediminibacterium salmoneum NBRC 103935	1400522	PRJNA219126	219126	FCB group	Bacteroidetes/Chlorobi group	3.24683	39.4	-	AXZP01	1	2947	2771	12/12/13	4/17/17	Scaffold	INGEBI-CONICET	SAMN02380457	GCA_000511175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/175/GCA_000511175.1_ASM51117v1	24435857	NBRC 103935
Candidatus Xenolissoclinum pacificiensis L6	1401685	PRJNA219341	219341	Proteobacteria	Alphaproteobacteria	1.03957	32.1	-	AXCJ01	9	986	956	1/2/14	2/7/14	Contig	University of Utah	SAMN02597470	GCA_000512675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/675/GCA_000512675.1_X_pac_1.0	24324632	-
alpha proteobacterium SCGC AAA288-N07	939346	PRJNA232477	232477	Proteobacteria	Alphaproteobacteria	0.954664	29.1	-	AZYB01	81	-	-	1/3/14	7/29/15	Contig	DOE Joint Genome Institute	SAMN02597280	GCA_000513055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/055/GCA_000513055.1_ASM51305v1	24451205	SCGC AAA288-N07
alpha proteobacterium SCGC AAA288-G21	939324	PRJNA232476	232476	Proteobacteria	Alphaproteobacteria	0.909786	30.1	-	AZYC01	139	-	-	1/3/14	7/29/15	Contig	DOE Joint Genome Institute	SAMN02597281	GCA_000513075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/075/GCA_000513075.1_ASM51307v1	24451205	SCGC AAA288-G21
Bacillus wakoensis JCM 9140	1236970	PRJDB668	232556	Terrabacteria group	Firmicutes	4.53094	38.3	-	BAUT01	187	4493	3975	12/26/13	4/9/17	Contig	The University of Tokyo	SAMD00000475	GCA_000513095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/095/GCA_000513095.1_ASM51309v1	24482522	JCM 9140
Pseudomonas putida	303	PRJNA244741	244741	Proteobacteria	Gammaproteobacteria	6.48406	62.5	chromosome:NZ_CP007620.1/CP007620.1	-	1	6139	5797	5/15/14	4/2/17	Complete Genome	Nanjing Agricultural University	SAMN02730082	GCA_000691565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/565/GCA_000691565.1_ASM69156v1	24948765	DLL-E4
Sediminibacillus halophilus	482461	PRJEB16191	348938	Terrabacteria group	Firmicutes	4.14976	42.9	-	FNHF01	13	4095	3947	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216244	GCA_900103695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/695/GCA_900103695.1_IMG-taxon_2675902964_annotated_assembly	-	CGMCC 1.6199
Bacillus hemicellulosilyticus JCM 9152	1236971	PRJDB669	232557	Terrabacteria group	Firmicutes	4.53806	38.2	-	BAUU01	102	4270	3875	12/26/13	4/9/17	Contig	The University of Tokyo	SAMD00000476	GCA_000513115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/115/GCA_000513115.1_ASM51311v1	24482522	JCM 9152
Methanobrevibacter arboriphilus ANOR1	1401244	PRJEB4586	227553	Euryarchaeota	Methanobacteria	2.22192	25.5	-	CBVX01	1	1909	1691	12/13/13	4/9/17	Scaffold	URMITE	SAMEA3138839	GCA_000513315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/315/GCA_000513315.1_ANOR1	-	ANOR1
Pseudomonas monteilii SB3078	1435044	PRJNA231107	231107	Proteobacteria	Gammaproteobacteria	6.00009	62.5	chromosome:NC_023075.1/CP006978.1	-	1	5620	5390	12/18/13	4/2/17	Complete Genome	Aalborg University	SAMN02641476	GCA_000510285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/510/285/GCA_000510285.1_ASM51028v1	24874689	SB3078
Planomicrobium glaciei	459472	PRJEB15923	348262	Terrabacteria group	Firmicutes	3.91762	46.7	-	FNDC01	33	3905	3773	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487975	GCA_900099655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/655/GCA_900099655.1_IMG-taxon_2617270782_annotated_assembly	-	CGMCC 1.6846
Bacillus akibai JCM 9157	1236973	PRJDB671	232558	Terrabacteria group	Firmicutes	4.74037	37	-	BAUV01	142	4707	4253	12/26/13	4/9/17	Contig	The University of Tokyo	SAMD00000477	GCA_000513135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/135/GCA_000513135.1_ASM51313v1	24482522	JCM 9157
Pseudomonas monteilii SB3101	1435058	PRJNA231108	231108	Proteobacteria	Gammaproteobacteria	5.94512	62.5	chromosome:NC_023076.1/CP006979.1	-	1	5546	5318	12/18/13	4/2/17	Complete Genome	Aalborg University	SAMN02641477	GCA_000510325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/510/325/GCA_000510325.1_ASM51032v1	-	SB3101
[Desulfotomaculum] guttoideum	58134	PRJEB16435	349340	Terrabacteria group	Firmicutes	5.93138	43.4	-	FOIP01	2	5472	5283	10/29/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443270	GCA_900105215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/215/GCA_900105215.1_IMG-taxon_2687453780_annotated_assembly	-	DSM 4024
Rhodococcus erythropolis CCM2595	1136179	PRJNA81583	81583	Terrabacteria group	Actinobacteria	6.37142	62.5	chromosome:NC_022115.1/CP003761.1; plasmid pRECF1:NC_022125.1/CP003762.1	-	2	5895	5776	8/22/13	4/1/17	Complete Genome	Institute of Molecular Genetics of the ASCR	SAMN02603403	GCA_000454045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/045/GCA_000454045.1_ASM45404v1	24652983	CCM2595
Bacillus boroniphilus JCM 21738	1294265	PRJDB823	233589	Terrabacteria group	Firmicutes	4.36454	42	-	BAUW01	240	4477	3307	1/7/14	4/9/17	Contig	The University of Tokyo	SAMD00000546	GCA_000517385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/385/GCA_000517385.1_ASM51738v1	-	JCM 21738
Candidatus Sodalis sp. SoCistrobi	1922216	PRJEB15507	354853	Proteobacteria	Gammaproteobacteria	3.07533	56.4	-	FRDB01	397	3160	2490	12/3/16	4/17/17	Contig	Centre de Biologie pour la Gestion des Populations (CBGP - UMR1062)	SAMEA4560777	GCA_900143145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/145/GCA_900143145.1_SoCistrobi_v1.0	-	SoCistrobi
Facklamia sourekii ATCC 700629	1408438	PRJNA223101	223101	Terrabacteria group	Firmicutes	2.06704	41.4	-	JADD01	48	2018	1890	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02585004	GCA_000518205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/205/GCA_000518205.1_ASM51820v1	-	ATCC 700629
Helicobacter pametensis ATCC 51478	1408442	PRJNA223085	223085	Proteobacteria	delta/epsilon subdivisions	1.43507	40.1	-	JADE01	11	1420	1350	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02585003	GCA_000518225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/225/GCA_000518225.1_ASM51822v1	-	ATCC 51478
Brachyspira alvinipulli ATCC 51933	1408430	PRJNA223014	223014	Spirochaetes	Spirochaetia	3.42076	26.9	-	JADF01	22	3162	2968	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02585000	GCA_000518245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/245/GCA_000518245.1_ASM51824v1	-	ATCC 51933
Actinomadura oligospora ATCC 43269	1399798	PRJNA218807	218807	Terrabacteria group	Actinobacteria	9.35366	72	-	JADG01	33	8303	8000	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02584999	GCA_000518265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/265/GCA_000518265.1_ASM51826v1	-	ATCC 43269
Entomoplasma lucivorax ATCC 49196	1399797	PRJNA218806	218806	Terrabacteria group	Tenericutes	1.10309	30.1	-	JADH01	31	994	927	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02584998	GCA_000518285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/285/GCA_000518285.1_ASM51828v1	-	ATCC 49196
Mycoplasma imitans ATCC 51306	1399794	PRJNA218800	218800	Terrabacteria group	Tenericutes	0.922439	30.6	-	JADI01	24	762	671	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02584995	GCA_000518305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/305/GCA_000518305.1_ASM51830v1	-	ATCC 51306
Rhodospirillales bacterium URHD0088	1380394	PRJNA213782	213782	Proteobacteria	Alphaproteobacteria	6.64688	66.7	-	JADL01	33	6341	6166	1/10/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02584986	GCA_000518365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/365/GCA_000518365.1_ASM51836v1	-	URHD0088
Pseudomonas mendocina NK-01	1001585	PRJNA64797	64797	Proteobacteria	Gammaproteobacteria	5.43435	62.5	chromosome:NC_015410.1/CP002620.1	-	1	5089	4973	4/14/11	5/19/17	Complete Genome	"Department of Microbiology, College of Life Sciences, Nankai University,Tianjin 300071, China"	SAMN02603190	GCA_000204295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/295/GCA_000204295.1_ASM20429v1	21551299	NK-01
Bacteroides reticulotermitis JCM 10512	1445607	PRJDB561	234323	FCB group	Bacteroidetes/Chlorobi group	5.36528	43.3	-	BAIV01	97	4282	3271	1/7/14	4/9/17	Contig	The University of Tokyo	SAMD00011359	GCA_000517545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/545/GCA_000517545.1_ASM51754v1	24526645	JCM 10512
Streptomyces exfoliatus	1905	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.87496	71.9	-	JNZP01	129	7129	6781	7/15/14	3/11/17	Scaffold	University of Illinois	SAMN02645344	GCA_000725545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/545/GCA_000725545.1_Doro.v1.0	-	NRRL B-2924
Olleya marilimosa CAM030	1353276	PRJNA210210	210210	FCB group	Bacteroidetes/Chlorobi group	3.34371	31.8	-	JADR01	27	3055	2992	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02584980	GCA_000518485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/485/GCA_000518485.1_ASM51848v1	-	CAM030
Aquimarina megaterium XH134	1296416	PRJNA232805	232805	FCB group	Bacteroidetes/Chlorobi group	6.20639	32.9	-	JACB01	170	5347	5210	1/16/14	4/9/17	Contig	ocean university of China	SAMN02597431	GCA_000520975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/975/GCA_000520975.1_of_Aquimarina_megaterium	24030690	XH134
Aquimarina macrocephali JAMB N27	1443665	PRJNA232806	232806	FCB group	Bacteroidetes/Chlorobi group	6.05621	32.9	-	JACA01	169	5291	5127	1/16/14	4/17/17	Contig	ocean university of China	SAMN02597430	GCA_000520995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/995/GCA_000520995.1_of_Aquimarina_macrocephali	19915102	JAMB N27
Mycobacterium gastri 'Wayne'	1436723	PRJNA231757	231757	Terrabacteria group	Actinobacteria	6.00479	66.2	-	AZYN01	635	5703	4856	1/16/14	4/17/17	Contig	McGill University Mycobacterium genome consortium	SAMN02597426	GCA_000521195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/195/GCA_000521195.1_MgastriV1	-	Wayne
[Clostridium] straminisolvens JCM 21531	1294263	PRJDB821	235992	Terrabacteria group	Firmicutes	3.90712	38.3	-	BAVR01	195	3465	2260	1/21/14	8/8/17	Contig	The University of Tokyo	SAMD00000544	GCA_000521465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/465/GCA_000521465.1_ASM52146v1	24558248	JCM 21531
Gracilibacillus boraciitolerans JCM 21714	1298598	PRJDB874	235993	Terrabacteria group	Firmicutes	3.65158	35.8	-	BAVS01	88	3669	2558	1/21/14	4/17/17	Contig	The University of Tokyo	SAMD00003685	GCA_000521485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/485/GCA_000521485.1_ASM52148v1	24558242	JCM 21714
Roseivivax halodurans JCM 10272	1449350	PRJNA235142	235142	Proteobacteria	Alphaproteobacteria	4.49281	66.3	-	JALZ01	150	4325	4111	1/22/14	4/17/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02597438	GCA_000521785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/785/GCA_000521785.1_SOAPdenovo_v1.05	24567080	JCM 10272
Marinomonas ushuaiensis DSM 15871	1122207	PRJNA235145	235145	Proteobacteria	Gammaproteobacteria	3.3421	41.1	-	JAMB01	39	3139	3030	1/22/14	4/17/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02597439	GCA_000521805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/805/GCA_000521805.1_SOAPdenovo_v1.05	-	DSM 15871
Roseivivax isoporae LMG 25204	1449351	PRJNA235143	235143	Proteobacteria	Alphaproteobacteria	4.89823	69.8	-	JAME01	203	4644	4473	1/23/14	4/17/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02641562	GCA_000521865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/865/GCA_000521865.1_SOAPdenovo_v1.05	24567080	LMG 25204
Arcobacter cibarius LMG 21996	1442598	PRJNA232856	232856	Proteobacteria	delta/epsilon subdivisions	2.20135	27.1	-	JABW01	44	2211	2110	1/23/14	4/17/17	Contig	Agriculture and Agri-Food Canada	SAMN02641481	GCA_000522465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/465/GCA_000522465.1_Arcobacter_cibarius_LMG21996	24558232	LMG 21996
Mesorhizobium ciceri	39645	PRJNA317272	317272	Proteobacteria	Alphaproteobacteria	6.94363	62.4946	chromosome:NZ_CP015062.1/CP015062.1; plasmid pMc1192:NZ_CP015063.1/CP015063.1	-	2	6826	6551	4/12/16	4/12/17	Complete Genome	Murdoch University	SAMN04604738	GCA_001618825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/825/GCA_001618825.1_ASM161882v1	27284135	CC1192
Aphanizomenon flos-aquae NIES-81	284502	PRJNA232534	232534	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.85128	38.8	-	AZYY01	103	5258	4792	1/16/14	4/2/17	Scaffold	Northern Illinois University	SAMN02485748	GCA_000521175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/175/GCA_000521175.1_Aflos454contigs199p	24526634	NIES-81
Bifidobacterium moukalabense DSM 27321	1435051	PRJNA231049	231049	Terrabacteria group	Actinobacteria	2.51533	59.9	-	AZMV01	12	2175	1987	1/23/14	4/9/17	Contig	University of Parma	SAMN02641635	GCA_000522505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/505/GCA_000522505.1_DSM27321	24558236	DSM 27321
Lebetimonas sp. JH369	990069	PRJNA208428	208428	Proteobacteria	delta/epsilon subdivisions	1.74044	31.3	-	ATHP01	5	1901	1753	1/24/14	4/17/17	Contig	Marine Biological Lab	SAMN02203750	GCA_000522965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/965/GCA_000522965.1_LebetimonasJH369	24257443	JH369
Listeria aquatica FSL S10-1188	1265818	PRJNA182534	182534	Terrabacteria group	Firmicutes	2.60115	39.5	-	AOCG01	31	2713	1976	1/31/14	2/26/17	Contig	Cornell University	SAMN02671244	GCA_000525795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/795/GCA_000525795.1_Listeriaceae_bacterium_FSL_S10-1188	24599893	FSL S10-1188
Listeria grandensis FSL F6-0971	1265819	PRJNA182538	182538	Terrabacteria group	Firmicutes	3.18173	42	-	AODD01	62	3107	2759	1/31/14	2/26/17	Contig	Cornell University	SAMN02671247	GCA_000525835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/835/GCA_000525835.1_Listeriaceaebacterium_FSL_F6-971	24599893	FSL F6-0971
Listeria cornellensis FSL F6-0969	1265820	PRJNA182536	182536	Terrabacteria group	Firmicutes	3.34783	41.9	-	AODE01	91	3459	2828	1/31/14	2/26/17	Contig	Cornell University	SAMN02671246	GCA_000525855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/855/GCA_000525855.1_Listeriaceae_bacterium_FSL_F6-969	24599893	FSL F6-0969
Listeria floridensis FSL S10-1187	1265817	PRJNA182533	182533	Terrabacteria group	Firmicutes	2.79439	41	-	AODF01	92	2891	2302	1/31/14	2/26/17	Contig	Cornell University	SAMN02671245	GCA_000525875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/875/GCA_000525875.1_Listeriaceae_bacterium_FSL_S10-1187	24599893	FSL S10-1187
Brochothrix campestris FSL F6-1037	1265861	PRJNA182541	182541	Terrabacteria group	Firmicutes	2.37285	40.2	-	AODH01	128	2469	2122	1/31/14	4/17/17	Contig	Cornell University	SAMN02641491	GCA_000525915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/915/GCA_000525915.1_Bcampestris	-	FSL F6-1037
Listeria weihenstephanensis FSL R9-0317	1265845	PRJNA182537	182537	Terrabacteria group	Firmicutes	3.37444	41.4	-	AODJ01	71	3271	2979	1/31/14	2/26/17	Contig	Cornell University	SAMN02671251	GCA_000525955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/955/GCA_000525955.1_Lweihenstaphanensis	-	FSL R9-0317
Listeria riparia FSL S10-1204	1265816	PRJNA182529	182529	Terrabacteria group	Firmicutes	3.29104	41	-	AODL01	69	3216	2837	1/31/14	2/26/17	Contig	Cornell University	SAMN02671249	GCA_000525995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/995/GCA_000525995.1_PRIP_MIRA_assembly	24599893	FSL S10-1204
Verrucomicrobia bacterium LP2A	478741	PRJNA185245	185245	PVC group	Verrucomicrobia	2.46552	62.7	-	JAFS01	3	2385	2238	1/14/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02584925	GCA_000526255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/255/GCA_000526255.1_ASM52625v1	-	LP2A
bacterium JKG1	1128421	PRJNA195828	195828	unclassified Bacteria	unclassified Bacteria (miscellaneous)	4.47526	65.8	-	JAGA01	4	3932	3804	1/14/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02584935	GCA_000526415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/415/GCA_000526415.1_ASM52641v1	26634758	JKG1
Aminobacter sp. Root100	1736420	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	5.23994	63.8	-	LMCL01	35	5096	4911	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155689	GCA_001424795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/795/GCA_001424795.1_Root100	26633631	Root100
Paraburkholderia caribensis MBA4	1323664	PRJNA197459	197459	Proteobacteria	Betaproteobacteria	9.4827	62.4918	chromosome 1:NZ_CP012746.1/CP012746.1; chromosome 2:NZ_CP012747.1/CP012747.1; plasmid unnamed:NZ_CP012748.1/CP012748.1	-	3	8428	8190	10/30/15	4/11/17	Complete Genome	"School of Biological Sciences, The University of Hong Kong"	SAMN02641588	GCA_000522545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/545/GCA_000522545.2_ASM52254v2	24558235	MBA4
Candidatus Entotheonella sp. TSY1	1429438	PRJNA230050	230050	Nitrospinae/Tectomicrobia group	Candidatus Tectomicrobia	9.69517	55.3	-	AZHW01	962	8499	8438	1/22/14	1/31/14	Scaffold	Bielefeld University	SAMN02420412	GCA_000522425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/425/GCA_000522425.1_v3	24476823	-
Tomitella biformata AHU 1821	1448389	PRJDB1584	235994	Terrabacteria group	Actinobacteria	4.70953	68.1	-	BAVQ01	113	4351	4212	1/22/14	4/17/17	Contig	National Institute of Advanced Industrial Science and Technology	SAMD00036785	GCA_000524475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/475/GCA_000524475.1_ASM52447v1	24526642	AHU 1821
Sphingobium herbicidovorans	76947	PRJNA380772	380772	Proteobacteria	Alphaproteobacteria	4.2408	62.4912	chromosome:NZ_CP020538.1/CP020538.1; plasmid pMOB:NZ_CP020542.1/CP020542.1; plasmid pMSHV:NZ_CP020539.1/CP020539.1; plasmid pSHV1:NZ_CP020540.1/CP020540.1; plasmid pSHV2:NZ_CP020541.1/CP020541.1	-	5	4168	3899	4/6/17	8/7/17	Complete Genome	Aarhus University	SAMN06647797	GCA_002080435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/435/GCA_002080435.1_ASM208043v1	-	MH
Pseudomonas stutzeri RCH2	644801	PRJNA60029	60029	Proteobacteria	Gammaproteobacteria	4.60049	62.471	chromosome:NC_019936.1/CP003071.1; plasmid pPSEST01:NC_019937.1/CP003072.1; plasmid pPSEST02:NC_019938.1/CP003073.1; plasmid pPSEST03:NC_019939.1/CP003074.1	-	4	4353	4223	12/20/12	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02232046	GCA_000327065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/065/GCA_000327065.1_ASM32706v1	-	RCH2
Bacillus ginsengihumi J57	935938	PRJNA202361	202361	Terrabacteria group	Firmicutes	3.92174	35.9	-	JAGM01	84	3866	3629	1/14/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02584955	GCA_000526655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/655/GCA_000526655.1_ASM52665v1	-	J57
Candidatus Contendobacter odensis Run_B_J11	1400861	PRJEB4343	236986	Proteobacteria	Gammaproteobacteria	4.61165	57.4	-	CBTK01	319	4445	4143	1/29/14	4/9/17	Contig	"Department of Biotechnology, Chemistry and Environmental Engineering, Aalborg University"	SAMEA3138900	GCA_000531125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/125/GCA_000531125.1_COMPJ11_2695_PRJEB4343	24173461	Run_B_J11
Xenorhabdus szentirmaii DSM 16338	1427518	PRJEB4925	236225	Proteobacteria	Gammaproteobacteria	4.82477	44	-	CBXF01	164	4199	3853	1/23/14	4/17/17	Contig	"INRA MONTPELLIER,FRANCE"	SAMEA3138908	GCA_000531455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/455/GCA_000531455.1_XENSZ_2115_PRJEB4925	-	DSM 16338
Xenorhabdus cabanillasii JM26	1427517	PRJEB4924	236223	Proteobacteria	Gammaproteobacteria	4.62099	43.5	-	CBXE01	496	4142	3810	1/23/14	4/17/17	Contig	"INRA MONTPELLIER,FRANCE"	SAMEA3138917	GCA_000531755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/755/GCA_000531755.1_XENCA_2134_PRJEB4924	-	JM26
Streptococcus oralis subsp. dentisani	1458253	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.95535	41.1	-	NCUY01	32	1914	1805	4/18/17	4/21/17	Contig	Slagelse Hospital	SAMN06705610	GCA_002096655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/655/GCA_002096655.1_ASM209665v1	27325438	RH_70047_11
Hydrogenovibrio halophilus DSM 12350	1168067	PRJNA214437	214437	Proteobacteria	Gammaproteobacteria	2.45246	41.5	-	JAGP01	2	2295	2212	1/14/14	10/2/17	Contig	DOE Joint Genome Institute	SAMN02584989	GCA_000526715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/715/GCA_000526715.1_ASM52671v1	-	DSM 12350
Entomoplasma somnilux ATCC 49194	1399795	PRJNA218803	218803	Terrabacteria group	Tenericutes	0.864731	28	-	JAGV01	4	760	710	1/14/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02584996	GCA_000526835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/835/GCA_000526835.1_ASM52683v1	-	ATCC 49194
Entomoplasma luminosum ATCC 49195	1399796	PRJNA218805	218805	Terrabacteria group	Tenericutes	1.02257	29.8	-	JAGW01	41	906	844	1/14/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02584997	GCA_000526855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/855/GCA_000526855.1_ASM52685v1	-	ATCC 49195
Mycobacterium genavense ATCC 51234	1408452	PRJNA223121	223121	Terrabacteria group	Actinobacteria	4.93607	66.9	-	JAGZ01	25	4733	3558	1/14/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02585006	GCA_000526915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/915/GCA_000526915.1_ASM52691v1	-	ATCC 51234
Mycoplasma cricetuli ATCC 35279	1415781	PRJNA225852	225852	Terrabacteria group	Tenericutes	0.84775	24	-	JAHB01	45	745	667	1/14/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02585027	GCA_000526955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/955/GCA_000526955.1_ASM52695v1	-	ATCC 35279
Methanobrevibacter oralis	66851	PRJNA318760	318760	Euryarchaeota	Methanobacteria	2.14043	27.7	-	LWMU01	136	2025	1893	4/29/16	4/12/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04867341	GCA_001639275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/275/GCA_001639275.1_ASM163927v1	-	DSM 7256
Listeria rocourtiae FSL F6-920	1265846	PRJNA182535	182535	Terrabacteria group	Firmicutes	3.21675	40.3	-	AODK01	126	3255	2735	1/31/14	2/26/17	Contig	Cornell University	SAMN02671250	GCA_000525975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/975/GCA_000525975.1_LrocourtiaeTYPE	-	FSL F6-920
Luteimonas huabeiensis HB2	1442599	PRJNA232942	232942	Proteobacteria	Gammaproteobacteria	4.29592	71.6	-	JAAN01	86	3868	3735	2/5/14	4/9/17	Contig	China National Research Institute of Food and Fermentation Industries	SAMN02952968	GCA_000559025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/025/GCA_000559025.1_Luteimonas_huabeiensis_HB-2_Genome	24604652	HB2
Ochrobactrum rhizosphaerae SJY1	1437448	PRJNA231972	231972	Proteobacteria	Alphaproteobacteria	5.24577	54.2	-	AZRT01	198	5144	4873	2/5/14	4/17/17	Contig	"State Key Laboratory of Microbial Metabolism, and School of Life Sciences & Biotechnology, Shanghai Jiao Tong University"	SAMN02952963	GCA_000559065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/065/GCA_000559065.1_SJY1	25059869	SJY1
Mycobacterium aromaticivorans JS19b1 = JCM 16368	1440774	PRJNA232438	232438	Terrabacteria group	Actinobacteria	6.29762	66.4	-	JALN02	6	6082	5832	2/5/14	4/9/17	Contig	Kyungpook National University	SAMN02585141	GCA_000559085.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/085/GCA_000559085.2_ASM55908v2	25019926	JS19b1
Sulfolobales archaeon AZ1	1326980	PRJNA198460	198460	TACK group	Crenarchaeota	1.79889	47	-	ASRH01	46	2002	1975	2/7/14	3/24/15	Contig	Center for Genomic Sciences	SAMN03444554	GCA_000565255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/255/GCA_000565255.1_Az1	24604657	-
Anaerococcus pacaensis 9403502	938294	PRJEB55	169186	Terrabacteria group	Firmicutes	2.36609	35.9	-	CAJJ02	14	2226	2083	6/6/12	4/8/17	Scaffold	URMITE	SAMEA2271967	GCA_000308255.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/255/GCA_000308255.3_APac2	-	9403502
Paraburkholderia dilworthii	948106	PRJNA182743	182743	Proteobacteria	Betaproteobacteria	7.67907	61.8	-	AWZT01	140	7078	6575	9/30/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440790	GCA_000472525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/525/GCA_000472525.1_ASM47252v1	26388968	WSM3556
Bacteroides timonensis	1470345	PRJEB186	171364	FCB group	Bacteroidetes/Chlorobi group	7.01722	43.3	-	CBVI01	211	5665	5324	11/26/13	4/24/17	Contig	URMITE	SAMEA3138833	GCA_000513195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/195/GCA_000513195.1_AP1	-	-
Microvirga lupini	420324	PRJNA66529	66529	Proteobacteria	Alphaproteobacteria	9.63361	61.1	-	AZYE01	160	-	-	1/8/14	5/12/16	Scaffold	JGI	SAMN02597282	GCA_000517005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/005/GCA_000517005.1_ASM51700v1	-	Lut6
Paenibacillus pini JCM 16418	1236976	PRJDB674	238519	Terrabacteria group	Firmicutes	4.9618	42	-	BAVZ01	68	4722	4132	2/18/14	4/9/17	Contig	The University of Tokyo	SAMD00000453	GCA_000576305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/305/GCA_000576305.1_ASM57630v1	24652984	JCM 16418
Haloarcula hispanica N601	1417673	PRJNA227070	227070	Euryarchaeota	Halobacteria	3.9015	62.4661	chromosome 1:NC_023013.1/CP006884.1; chromosome 2:NC_023010.2/CP006885.2; plasmid pHH126:NC_023011.1/CP006886.1; plasmid pHH406:NC_023012.1/CP006887.1	-	4	3863	3742	12/9/13	3/22/17	Complete Genome	"Academia Sinica, Taipei, Taiwan"	SAMN02393367	GCA_000504565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/565/GCA_000504565.2_ASM50456v2	24625874	N601
Intrasporangium chromatireducens Q5-1	584657	PRJNA215130	215130	Terrabacteria group	Actinobacteria	4.80425	70.6	-	AWQS01	660	4569	4230	2/24/14	4/9/17	Contig	Huazhong Agricultural University	SAMN02952954	GCA_000576575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/575/GCA_000576575.1_genome	-	Q5-1
Intrasporangium oryzae NRRL B-24470	1386089	PRJNA215131	215131	Terrabacteria group	Actinobacteria	4.63653	71.4	-	AWSA01	140	4270	4076	2/24/14	4/17/17	Contig	Huazhong Agricultural University	SAMN02952955	GCA_000576595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/595/GCA_000576595.1_genome	-	NRRL B-24470
Skermanella stibiiresistens SB22	1385369	PRJNA214805	214805	Proteobacteria	Alphaproteobacteria	7.86834	65.9	-	AVFL01	190	7186	6956	2/24/14	4/17/17	Contig	State Key Laboratory of Agricultural Microbiology	SAMN02951888	GCA_000576635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/635/GCA_000576635.1_genome	-	SB22
Paucisalibacillus sp. EB02	1347087	PRJEB4216	222447	Terrabacteria group	Firmicutes	4.00677	36	-	CBYO01	23	3977	3846	2/12/14	4/9/17	Contig	URMITE	SAMEA3138924	GCA_000577245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/245/GCA_000577245.1_EB02	-	EB02
Mesorhizobium loti MAFF303099	266835	PRJNA18	18	Proteobacteria	Alphaproteobacteria	7.5963	62.4657	chromosome:NC_002678.2/BA000012.4; plasmid pMLa:NC_002679.1/BA000013.4; plasmid pMLb:NC_002682.1/AP003017.1	-	3	7487	7114	2/3/01	3/29/17	Complete Genome	Kazusa	SAMD00061086	GCA_000009625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/625/GCA_000009625.1_ASM962v1	11214968	MAFF303099
Haloarcula hispanica ATCC 33960	634497	PRJNA68523	68523	Euryarchaeota	Halobacteria	3.89	62.4615	chromosome I:NC_015948.1/CP002921.1; chromosome II:NC_015943.1/CP002922.1; plasmid pHH400:NC_015944.1/CP002923.1	-	3	3845	3728	8/17/11	3/22/17	Complete Genome	" Institute of Microbiology, Chinese Academy of Sciences"	SAMN02602960	GCA_000223905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/223/905/GCA_000223905.1_ASM22390v1	21994921	CGMCC 1.2049
Candidatus Blastococcus massiliensis AP3	1211815	PRJEB371	172619	Terrabacteria group	Actinobacteria	3.87468	73.2	-	CBYP01	4	3764	3595	2/12/14	4/9/17	Scaffold	URMITE	SAMEA3138949	GCA_000582785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/785/GCA_000582785.1_B.massiliensis	-	AP3
Isosphaera pallida ATCC 43644	575540	PRJNA32825	32825	PVC group	Planctomycetes	5.5293	62.4469	chromosome:NC_014962.1/CP002353.1; plasmid pISOP01:NC_014957.1/CP002354.1	-	2	4006	3893	1/20/11	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00138929	GCA_000186345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/345/GCA_000186345.1_ASM18634v1	21475588	ATCC 43644
Dehalococcoidia bacterium Dsc1	1417303	PRJNA222231	222231	Terrabacteria group	Chloroflexi	0.318003	45.6	-	JARM01	84	-	-	2/28/14	7/29/15	Contig	Stanford University	SAMN02951930	GCA_000583175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/175/GCA_000583175.1_Dsc1	24599070	Dsc1
Dehalococcoidia bacterium DscP2	1419582	PRJNA227210	227210	Terrabacteria group	Chloroflexi	1.37994	45.4	-	JARN01	323	-	-	2/28/14	7/29/15	Contig	Stanford University	SAMN02951931	GCA_000583195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/195/GCA_000583195.1_DscP2	24599070	DscP2
Lactobacillus farraginis DSM 18382 = JCM 14108	1423743	PRJDB599	239672	Terrabacteria group	Firmicutes	2.84468	42.1	-	BAKI01	129	2821	2180	2/27/14	4/9/17	Contig	The University of Tokyo	SAMD00008613	GCA_000583655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/655/GCA_000583655.1_ASM58365v1	24675866	JCM 14108
Dyadobacter tibetensis Y620-1	1434325	PRJNA230913	230913	FCB group	Bacteroidetes/Chlorobi group	5.31342	43.4	-	AZQN01	33	4230	4140	1/30/14	4/17/17	Contig	Institute of Urban Environment	SAMN02951879	GCA_000566685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/685/GCA_000566685.1_Dyadobacter_tibetensis_Y620-1	-	Y620-1
Robbsia andropogonis	28092	PRJNA279601	279601	Proteobacteria	Betaproteobacteria	6.20381	58.9	-	LAQU01	272	5450	5049	4/7/15	4/10/17	Contig	Lab. de Bacteriologia Vegetal	SAMN03450203	GCA_000970345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/345/GCA_000970345.1_ASM97034v1	25977431	ICMP2807
Lactobacillus composti DSM 18527 = JCM 14202	1423734	PRJDB649	239673	Terrabacteria group	Firmicutes	3.4497	43.9	-	BAMK01	94	3473	2831	2/27/14	4/9/17	Contig	The University of Tokyo	SAMD00003395	GCA_000583695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/695/GCA_000583695.1_ASM58369v1	24675866	JCM 14202
Sinorhizobium sp. RAC02	1842534	PRJNA319831	319831	Proteobacteria	Alphaproteobacteria	6.62658	62.4468	chromosome:NZ_CP016450.1/CP016450.1; plasmid pBSY16_1:NZ_CP016452.1/CP016452.1; plasmid pBSY16_2:NZ_CP016451.1/CP016451.1	-	3	6303	6103	8/25/16	4/13/17	Complete Genome	Los Alamos National Laboratory	SAMN04909707	GCA_001713395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/395/GCA_001713395.1_ASM171339v1	-	RAC02
Candidatus Accumulibacter sp. SK-01	1457154	PRJNA231877	231877	Proteobacteria	Betaproteobacteria	4.56108	61.3	-	JDSS02	53	4396	4354	3/3/14	7/28/14	Contig	Australian Centre for Ecogenomics	SAMN00778986	GCA_000584955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/955/GCA_000584955.2_capsk01v2	-	-
Deinococcus phoenicis	1476583	PRJNA241460	241460	Terrabacteria group	Deinococcus-Thermus	3.80714	69	-	JHAC01	94	3724	3586	3/24/14	4/9/17	Contig	University of Houston	SAMN02690678	GCA_000599865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/865/GCA_000599865.1_Deiph1P10ME_08-2013_v01	24762934	1P10ME
Mesorhizobium sp. WSM1497	278153	PRJNA323416	323416	Proteobacteria	Alphaproteobacteria	7.19812	62.4154	chromosome:NZ_CP021070.1/CP021070.1; plasmid pWSM1497:NZ_CP021071.1/CP021071.1	-	2	7008	6654	5/1/17	5/22/17	Complete Genome	Curtin University	SAMN05178614	GCA_001672455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/455/GCA_001672455.2_ASM167245v2	-	WSM1497
Microvirga lotononidis	864069	PRJNA65303	65303	Proteobacteria	Alphaproteobacteria	7.08254	63	-	AJUA01	18	6915	6524	5/7/12	5/19/17	Scaffold	JGI	SAMN02261420	GCA_000262405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/405/GCA_000262405.1_ASM26240v1	-	WSM3557
Oceanobacillus massiliensis str. N'diop	946235	PRJEA70547	70547	Terrabacteria group	Firmicutes	3.59356	40.5	-	CAER01	50	3511	3314	2/28/12	4/7/17	Scaffold	laboratoire URMITE CNRS 6236	SAMEA2272754	GCA_000285495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/495/GCA_000285495.1_ASM28549v1	-	Ndiop
Paenibacillus senegalensis JC66	1033743	PRJEA70825	70825	Terrabacteria group	Firmicutes	5.61475	48.2	-	CAES01	96	4921	4717	2/28/12	5/19/17	Scaffold	laboratoire URMITE CNRS 6236	SAMEA2271960	GCA_000285515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/515/GCA_000285515.1_ASM28551v1	-	type strain: JC66
Bacillus timonensis	1033734	PRJEA70827	70827	Terrabacteria group	Firmicutes	4.65772	37.4	-	CAET01	72	4523	4301	2/28/12	6/15/17	Scaffold	laboratoire URMITE CNRS 6236	SAMEA2272358	GCA_000285535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/535/GCA_000285535.1_ASM28553v1	-	MM10403188
Clostridium senegalense JC122	1033737	PRJEA70833	70833	Terrabacteria group	Firmicutes	3.92589	27.1	-	CAEV01	83	3581	3321	2/28/12	4/7/17	Scaffold	laboratoire URMITE CNRS 6236	SAMEA2272503	GCA_000285575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/575/GCA_000285575.1_ASM28557v1	-	type strain: JC122
Alistipes timonensis JC136	1033731	PRJEB16631	349940	FCB group	Bacteroidetes/Chlorobi group	3.48896	58.8	-	FNRI01	21	2754	2666	10/22/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444145	GCA_900107675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/675/GCA_900107675.1_IMG-taxon_2693429854_annotated_assembly	-	DSM 25383
Halorhodospira halochloris	1052	PRJDB4565	312184	Proteobacteria	Gammaproteobacteria	2.81978	56	chromosome:AP017372.1	-	1	2692	2640	2/19/16	2/19/16	Chromosome	"Environment and Life Sciences, Toyohashi University of Technology"	SAMD00046889	GCA_002356555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/555/GCA_002356555.1_HH1059_assembly_1.0	-	DSM-1059
Aeromicrobium massiliense JC14	1033730	PRJEA82327	82327	Terrabacteria group	Actinobacteria	3.32212	72.6	-	CAHG01	5	3294	3211	6/1/12	4/8/17	Scaffold	URMITE CNRS UMR 6236 IRD 198	SAMEA2272444	GCA_000312105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/105/GCA_000312105.1_ASM31210v1	-	-
Cellulomonas massiliensis JC225	1095767	PRJEA82281	82281	Terrabacteria group	Actinobacteria	3.41051	73.5	-	CAHD01	7	3176	2929	5/30/12	4/8/17	Scaffold	URMITE CNRS UMR 6236 IRD 198	SAMEA2272357	GCA_000312005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/005/GCA_000312005.1_ASM31200v1	-	-
Noviherbaspirillum massiliense JC206	1095769	PRJEA82325	82325	Proteobacteria	Betaproteobacteria	4.18827	59.9	-	CAHF01	3	3904	3805	6/1/12	5/18/17	Scaffold	URMITE CNRS UMR 6236 IRD 198	SAMEA2271952	GCA_000312045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/045/GCA_000312045.1_ASM31204v1	-	JC206
Timonella senegalensis JC301	1095772	PRJEA82329	82329	Terrabacteria group	Actinobacteria	3.00994	61.3	-	CAHH01	6	2704	2527	6/1/12	4/8/17	Scaffold	URMITE CNRS UMR 6236 IRD 198	SAMEA2271956	GCA_000312125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/125/GCA_000312125.1_ASM31212v1	-	-
Brevibacterium senegalense	1033736	PRJEA82613	82613	Terrabacteria group	Actinobacteria	3.42733	69.8	-	CAHK01	17	3104	2950	5/4/12	4/17/17	Scaffold	URMITE CNRS UMR 6236 IRD 198	SAMEA2272372	GCA_000285835.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/835/GCA_000285835.2_ASM28583v2	-	-
Bartonella senegalensis OS02	929794	PRJEB226	171824	Proteobacteria	Alphaproteobacteria	2.00232	38.8	-	CALV01	41	1722	1480	8/17/12	4/8/17	Scaffold	URMITE	SAMEA2272101	GCA_000312545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/545/GCA_000312545.1_ASM31254v1	-	OS02
Bacillus massilioanorexius AP8	1211814	PRJEB376	172620	Terrabacteria group	Firmicutes	4.58894	34.1	-	CAPG01	120	4395	4213	11/28/12	6/15/17	Contig	URMITE	SAMEA2272318	GCA_000321185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/185/GCA_000321185.1_ASM32118v1	-	AP8
Alistipes ihumii AP11	1211813	PRJEB379	172618	FCB group	Bacteroidetes/Chlorobi group	2.77282	57.9	-	CAPH01	60	2320	2214	11/28/12	5/18/17	Contig	URMITE	SAMEA2272467	GCA_000321205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/205/GCA_000321205.1_ASM32120v1	-	AP11
Mesotoga infera	1236046	PRJEB1161	195579	Thermotogae	Thermotogae	3.10827	45.2	-	CARH01	99	3044	2973	4/10/13	8/14/15	Contig	MIO	SAMEA2272429	GCA_000367705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/705/GCA_000367705.1_ASM36770v1	-	PhosAc3
Peptoniphilus senegalensis JC140	1033744	PRJEA70541	70541	Terrabacteria group	Firmicutes	1.85134	32.5	-	CAEL01	29	1727	1635	11/19/12	4/10/17	Scaffold	laboratoire URMITE CNRS 6236	SAMEA2272315	GCA_000321025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/025/GCA_000321025.1_ASM32102v1	-	type strain: JC140
Brevibacillus massiliensis	1118054	PRJEA82077	82077	Terrabacteria group	Firmicutes	5.06036	53	-	CAGW01	37	5052	4739	5/30/12	5/18/17	Scaffold	URMITE CNRS UMR 6236 IRD 198	SAMEA2272187	GCA_000311785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/785/GCA_000311785.1_ASM31178v1	-	-
Peptoniphilus grossensis ph5	1118057	PRJEA82079	82079	Terrabacteria group	Firmicutes	2.10187	34.4	-	CAGX01	8	1994	1899	5/30/12	4/8/17	Scaffold	URMITE CNRS UMR 6236 IRD 198	SAMEA2271924	GCA_000311825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/825/GCA_000311825.1_ASM31182v1	-	ph5
Alkalibacterium sp. AK22	1229520	PRJNA235242	235242	Terrabacteria group	Firmicutes	2.32805	44.7	-	JANL01	44	2172	2097	3/4/14	4/9/17	Contig	Institute of Microbial Technology	SAMN02951878	GCA_000585255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/255/GCA_000585255.1_AlkLun1.0	-	AK22
Sphingobium baderi	1332080	PRJNA300354	300354	Proteobacteria	Alphaproteobacteria	4.58342	62.4082	chromosome:NZ_CP013264.1/CP013264.1; plasmid pDE1:NZ_CP013265.1/CP013265.1; plasmid pDE2:NZ_CP013266.1/CP013266.1; plasmid pDE3:NZ_CP013267.1/CP013267.1; plasmid pDE4:NZ_CP013268.1/CP013268.1; plasmid pDE5:NZ_CP013269.1/CP013269.1; plasmid pDE6:NZ_CP013270.1/CP013270.1; plasmid pDE7:NZ_CP013271.1/CP013271.1; plasmid pDE8:NZ_CP013272.1/CP013272.1	-	9	4569	4370	12/3/15	4/11/17	Complete Genome	Nanjing Agricultural University	SAMN04219548	GCA_001456115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/115/GCA_001456115.1_ASM145611v1	-	DE-13
Holdemania massiliensis AP2	1211819	PRJEB187	171365	Terrabacteria group	Firmicutes	3.81148	47	-	CALK01	17	3527	3411	7/31/12	4/8/17	Scaffold	URMITE	SAMEA2272076	GCA_000327285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/285/GCA_000327285.1_ASM32728v1	-	AP2
Peptostreptococcaceae bacterium AS15	936556	PRJNA78563	78563	Terrabacteria group	Firmicutes	2.65464	32.2	-	ALJM01	52	2293	2194	8/13/12	4/17/17	Contig	J. Craig Venter Institute	SAMN00828784	GCA_000287695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/695/GCA_000287695.1_EspAS15v1.0	-	AS15
Acinetobacter bohemicus ANC 3994	1217715	PRJNA183332	183332	Proteobacteria	Gammaproteobacteria	3.65769	39.6	-	APOH01	14	3417	3219	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01828192	GCA_000367925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/925/GCA_000367925.1_Acin_sp_ANC_3994_V1	-	ANC 3994
Lysinibacillus sp. ZYM-1	1681184	PRJNA297386	297386	Terrabacteria group	Firmicutes	4.86287	37	-	LKPY01	81	4823	4585	10/9/15	4/11/17	Scaffold	Dalian university of technology	SAMN04123205	GCA_001308875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/308/875/GCA_001308875.1_ASM130887v1	26769938	ZYM-1
Streptomyces thermolilacinus SPC6	1306406	PRJNA193392	193392	Terrabacteria group	Actinobacteria	6.44862	73.4	-	ASHX02	6	5700	5399	5/31/13	3/13/17	Contig	"Key Laboratory of Desert and Desertification, Cold and Arid Regions Environmental and Engineering Research Institute, Chinese Academy of Sciences"	SAMN02116697	GCA_000478605.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/605/GCA_000478605.2_ASM47860v2	23868127	SPC6
Cobetia crustatorum	553385	PRJNA237992	237992	Proteobacteria	Gammaproteobacteria	4.04995	57.5	-	JEMF01	138	3497	3066	3/17/14	4/17/17	Contig	Kyung Hee University	SAMN02640257	GCA_000591415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/415/GCA_000591415.1_Draft_genome_of_Cobetia_crustatorum_JO1	-	JO1
Sinorhizobium fredii NGR234	394	PRJNA21101	21101	Proteobacteria	Alphaproteobacteria	6.8919	62.4031	chromosome:NC_012587.1/CP001389.1; plasmid pNGR234a:NC_000914.2/U00090.2; plasmid pNGR234b:NC_012586.1/CP000874.1	-	3	6472	6362	4/22/09	7/27/17	Complete Genome	Goettingen Genomics Laboratory	SAMN02603283	GCA_000018545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/545/GCA_000018545.1_ASM1854v1	19376903	NGR234
Cobetia marina	28258	PRJNA339504	339504	Proteobacteria	Gammaproteobacteria	4.1764	62.4	chromosome:NZ_CP017114.1/CP017114.1	-	1	3539	3353	9/7/16	4/17/17	Complete Genome	Ocean university of China	SAMN05592162	GCA_001720485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/485/GCA_001720485.1_ASM172048v1	-	JCM 21022
candidate division TM6 bacterium JCVI TM6SC1	1306947	PRJNA193445	193445	unclassified Bacteria	Bacteria candidate phyla	1.07469	36.4	-	ARQD01	7	1032	860	4/29/13	2/24/15	Contig	J. Craig Venter Institute	SAMN02436396	GCA_000385635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/635/GCA_000385635.1_ASM38563v1	23754396	TM6SC1
Pseudomonas plecoglossicida	70775	PRJNA269662	269662	Proteobacteria	Gammaproteobacteria	6.23325	62.4	chromosome:NZ_CP010359.1/CP010359.1	-	1	5843	5562	2/3/15	4/10/17	Complete Genome	Wuhan Polytechnic University	SAMN03256214	GCA_000831585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/585/GCA_000831585.1_ASM83158v1	-	NyZ12
Rubellimicrobium mesophilum DSM 19309	442562	PRJNA188767	188767	Proteobacteria	Alphaproteobacteria	4.92184	69.7	-	AOSK01	126	4798	4121	3/26/14	4/11/17	Scaffold	Leibniz Institute DSMZ Braunschweig	SAMN02951863	GCA_000600335.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/335/GCA_000600335.2_Rumeso	-	DSM 19309
Fervidicella metallireducens AeB	1403537	PRJNA221129	221129	Terrabacteria group	Firmicutes	2.89247	32	-	AZQP01	164	2891	2585	3/27/14	4/17/17	Contig	"Microbial Gene Research & Resources Facility, Griffith University"	SAMN02952959	GCA_000601455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/455/GCA_000601455.1_Fervidicella_assembly	24786951	AeB
Actinotalea ferrariae CF5-4	948458	PRJNA215136	215136	Terrabacteria group	Actinobacteria	3.98708	73.8	-	AXCW01	626	3770	3387	3/28/14	4/9/17	Contig	Huazhong Agricultural University	SAMN02690685	GCA_000603945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/945/GCA_000603945.1_genome	-	CF5-4
Laribacter hongkongensis HLHK9	557598	PRJNA30817	30817	Proteobacteria	Betaproteobacteria	3.16933	62.4	chromosome:NC_012559.1/CP001154.1	-	1	3058	2835	4/14/09	4/7/17	Complete Genome	The University of Hong Kong	SAMN02603956	GCA_000021025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/025/GCA_000021025.1_ASM2102v1	19283063	HLHK9
Enterobacter massiliensis JC163	1095768	PRJEA70551	70551	Proteobacteria	Gammaproteobacteria	5.00354	55.3	-	CAEO01	77	4774	4363	11/19/12	4/8/17	Scaffold	Laboratoire URMITE CNRS 6236	SAMEA2272705	GCA_000321045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/045/GCA_000321045.2_ASM32104v2	-	type strain: JC163
Oligotropha carboxidovorans OM5	504832	PRJNA28805	28805	Proteobacteria	Alphaproteobacteria	3.74563	62.4	chromosome:NC_011386.1/CP001196.1	-	1	3616	3518	10/22/08	4/7/17	Complete Genome	Mississippi State University	SAMN02603611	GCA_000021365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/365/GCA_000021365.1_ASM2136v1	18539730	OM5; ATCC 49405
Clostridium ihumii AP5	1211817	PRJEB373	172616	Terrabacteria group	Firmicutes	4.43367	26.7	-	CCAT01	96	4046	3896	3/20/14	4/28/17	Contig	URMITE	SAMEA3138979	GCA_000612845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/845/GCA_000612845.1_AP5T	-	AP5
Bacteroides acidifaciens	85831	PRJEB8296	276426	FCB group	Bacteroidetes/Chlorobi group	6.15396	44.5	-	CDPR01	1604	4975	3992	2/24/15	4/10/17	Contig	CGS-GL	SAMEA3217987	GCA_000944395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/395/GCA_000944395.1_1e8A_assembly	-	1e8A
Flavobacterium succinicans LMG 10402	1450525	PRJNA235745	235745	FCB group	Bacteroidetes/Chlorobi group	3.65281	35.5	-	JATV01	48	3196	3090	3/31/14	4/9/17	Contig	Genome Consortium for Active Teaching	SAMN02586105	GCA_000611675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/675/GCA_000611675.1_ASM61167v1	-	LMG 10402
Asaia astilbis JCM 15831	1236500	PRJDB587	243162	Proteobacteria	Alphaproteobacteria	3.14742	58	-	BAJT01	49	2957	2305	4/1/14	4/17/17	Contig	The University of Tokyo	SAMD00009367	GCA_000613845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/845/GCA_000613845.1_ASM61384v1	-	JCM 15831
Prevotella falsenii DSM 22864 = JCM 15124	1122983	PRJDB592	243167	FCB group	Bacteroidetes/Chlorobi group	2.80024	44	-	BAJY01	92	2457	2034	4/1/14	4/17/17	Contig	The University of Tokyo	SAMD00004645	GCA_000613945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/945/GCA_000613945.1_ASM61394v1	-	JCM 15124
Prevotella aurantiaca JCM 15754	1236508	PRJDB596	243172	FCB group	Bacteroidetes/Chlorobi group	3.00217	38.9	-	BAKF01	148	2586	2156	4/1/14	4/17/17	Contig	The University of Tokyo	SAMD00012187	GCA_000614025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/025/GCA_000614025.1_ASM61402v1	-	JCM 15754
Prevotella dentasini JCM 15908	1236509	PRJDB597	243173	FCB group	Bacteroidetes/Chlorobi group	2.54661	50.6	-	BAKG01	41	2168	1668	4/1/14	4/17/17	Contig	The University of Tokyo	SAMD00015869	GCA_000614065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/065/GCA_000614065.1_ASM61406v1	-	JCM 15908
Bacteroides rodentium JCM 16496	1236512	PRJDB600	243175	FCB group	Bacteroidetes/Chlorobi group	4.88449	47.1	-	BAKJ01	148	-	-	4/1/14	9/16/15	Contig	The University of Tokyo	SAMD00002732	GCA_000614125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/125/GCA_000614125.1_ASM61412v1	-	JCM 16496
Bacteroides stercorirosoris JCM 17103	1236514	PRJDB602	243177	FCB group	Bacteroidetes/Chlorobi group	6.24137	44.6	-	BAKL01	203	5055	3688	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00010222	GCA_000614165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/165/GCA_000614165.1_ASM61416v1	-	JCM 17103
Prevotella shahii DSM 15611 = JCM 12083	1122991	PRJDB565	243144	FCB group	Bacteroidetes/Chlorobi group	3.48988	44.4	-	BAIZ01	142	2770	2051	4/1/14	4/17/17	Contig	The University of Tokyo	SAMD00012546	GCA_000613445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/445/GCA_000613445.1_ASM61344v1	-	JCM 12083
Bacteroides paurosaccharolyticus JCM 15092	1236498	PRJDB585	243160	FCB group	Bacteroidetes/Chlorobi group	3.43035	37.1	-	BAJR01	89	2819	2450	4/1/14	4/17/17	Contig	The University of Tokyo	SAMD00009976	GCA_000613805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/805/GCA_000613805.1_ASM61380v1	-	JCM 15092
Prevotella scopos JCM 17725	1236518	PRJNA282954	282954	FCB group	Bacteroidetes/Chlorobi group	3.30375	40.722	chromosome 1:NZ_CP016204.1/CP016204.1; chromosome 2:NZ_CP016205.1/CP016205.1; plasmid unnamed1:NZ_CP016206.1/CP016206.1	-	3	2656	2457	7/11/16	4/13/17	Chromosome	The Forsyth Institute	SAMN03897722	GCA_001683355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/355/GCA_001683355.1_ASM168335v1	-	W2052
Porphyromonas cangingivalis JCM 15983	1236520	PRJDB608	243183	FCB group	Bacteroidetes/Chlorobi group	2.35615	47.6	-	BAKR01	48	2144	1737	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00003336	GCA_000614355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/355/GCA_000614355.1_ASM61435v1	-	JCM 15983
Asaia platycodi JCM 25414	1236525	PRJDB613	243191	Proteobacteria	Alphaproteobacteria	3.15097	59.3	-	BAKW01	35	2971	2056	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00002827	GCA_000614545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/545/GCA_000614545.1_ASM61454v1	-	JCM 25414
Porphyromonas gingivicanis JCM 15907	1236526	PRJDB614	243192	FCB group	Bacteroidetes/Chlorobi group	2.05425	42.7	-	BAKX01	35	1837	1529	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00009315	GCA_000614585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/585/GCA_000614585.1_ASM61458v1	-	JCM 15907
Sinorhizobium meliloti	382	PRJNA361265	361265	Proteobacteria	Alphaproteobacteria	6.47257	62.396	chromosome:NZ_CP019488.1/CP019488.1; plasmid pSym:NZ_CP019487.1/CP019487.1; plasmid pSymA:NZ_CP019486.1/CP019486.1	-	3	6493	5995	9/14/17	9/16/17	Complete Genome	National Institute of Agricultural Technology (INTA)	SAMN06229775	GCA_002302375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/375/GCA_002302375.1_ASM230237v1	-	B399
Shewanella haliotis JCM 14758	1236541	PRJDB630	243206	Proteobacteria	Gammaproteobacteria	4.92992	52.9	-	BALL01	125	4568	3403	4/1/14	4/17/17	Contig	The University of Tokyo	SAMD00004655	GCA_000614935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/935/GCA_000614935.1_ASM61493v1	-	JCM 14758
Shewanella marina JCM 15074	1236542	PRJDB631	243208	Proteobacteria	Gammaproteobacteria	4.42465	40.4	-	BALM01	75	3971	3444	4/1/14	4/17/17	Contig	The University of Tokyo	SAMD00011086	GCA_000614975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/975/GCA_000614975.1_ASM61497v1	-	JCM 15074
Lactobacillus kitasatonis DSM 16761 = JCM 1039	1423767	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.91133	37.5	-	AZFU01	45	1930	1744	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369418	GCA_001434435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/435/GCA_001434435.1_ASM143443v1	26415554	DSM 16761
Bacillus mannanilyticus JCM 10596	1236954	PRJDB653	243236	Terrabacteria group	Firmicutes	4.5346	39.6	-	BAMO01	108	4478	3870	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00012480	GCA_000615945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/945/GCA_000615945.1_ASM61594v1	-	JCM 10596
Acidomonas methanolica NBRC 104435	1231351	PRJDB503	174854	Proteobacteria	Alphaproteobacteria	3.69003	64.6	-	BAND01	546	3439	3229	3/29/14	4/9/17	Scaffold	Kinki University	SAMD00036639	GCA_000617865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/865/GCA_000617865.1_ASM61786v1	24330138	MB58
Methylobacillus glycogenes JCM 2850	1236959	PRJDB658	243243	Proteobacteria	Betaproteobacteria	3.249	53.4	-	BAMT01	28	3111	2433	4/1/14	6/20/17	Contig	The University of Tokyo	SAMD00006362	GCA_000617925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/925/GCA_000617925.1_ASM61792v1	-	JCM 2850
Sulfurihydrogenibium subterraneum DSM 15120	1123325	PRJNA221056	221056	Aquificae	Aquificae	1.61018	32.3	-	JHUV01	16	1712	1642	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02769639	GCA_000619805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/805/GCA_000619805.1_ASM61980v1	-	DSM 15120
Alkanindiges illinoisensis DSM 15370	1120977	PRJNA221008	221008	Proteobacteria	Gammaproteobacteria	3.29941	46.3	-	JHUX01	11	3109	3017	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02769641	GCA_000619845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/845/GCA_000619845.1_ASM61984v1	-	DSM 15370
Balneatrix alpica DSM 16621	1121103	PRJNA221005	221005	Proteobacteria	Gammaproteobacteria	3.65392	54.4	-	JHUZ01	14	3442	3344	4/8/14	4/6/17	Scaffold	DOE Joint Genome Institute	SAMN02769643	GCA_000619885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/885/GCA_000619885.1_ASM61988v1	-	DSM 16621
Clostridium lundense DSM 17049	1410653	PRJNA223468	223468	Terrabacteria group	Firmicutes	4.7536	29.3	-	JHVC01	52	4522	4337	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02952982	GCA_000619945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/945/GCA_000619945.1_ASM61994v1	-	DSM 17049
Propionibacteriaceae bacterium P6A17	1410634	PRJNA223447	223447	Terrabacteria group	Actinobacteria	2.73163	69.3	-	JHVD01	48	2575	2430	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02952983	GCA_000619965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/965/GCA_000619965.1_ASM61996v1	-	P6A17
Mycoplasma spumans ATCC 19526	1408470	PRJNA223083	223083	Terrabacteria group	Tenericutes	0.835846	27.3	-	JHVF01	28	698	632	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02952985	GCA_000620005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/005/GCA_000620005.1_ASM62000v1	-	ATCC 19526
Zymobacter palmae DSM 10491	1123510	PRJNA221058	221058	Proteobacteria	Gammaproteobacteria	2.97295	56.1	-	JHVG01	49	2628	2510	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02952986	GCA_000620025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/025/GCA_000620025.1_ASM62002v1	-	DSM 10491
Halomonas halodenitrificans DSM 735	1121941	PRJNA221029	221029	Proteobacteria	Gammaproteobacteria	3.46409	64	-	JHVH01	52	3188	3040	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02952987	GCA_000620045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/045/GCA_000620045.1_ASM62004v1	-	DSM 735
Meiothermus cerbereus DSM 11376	1122221	PRJNA221026	221026	Terrabacteria group	Deinococcus-Thermus	3.03482	61.4	-	JHVI01	54	2965	2827	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02952988	GCA_000620065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/065/GCA_000620065.1_ASM62006v1	-	DSM 11376
Marinobacterium jannaschii DSM 6295	1122200	PRJNA221025	221025	Proteobacteria	Gammaproteobacteria	5.17783	55.2	-	JHVJ01	39	4705	4546	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02952989	GCA_000620085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/085/GCA_000620085.1_ASM62008v1	-	DSM 6295
Microvirgula aerodenitrificans DSM 15089	1122240	PRJNA221023	221023	Proteobacteria	Betaproteobacteria	4.03931	64.2	-	JHVK01	58	3815	3638	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02952990	GCA_000620105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/105/GCA_000620105.1_ASM62010v1	-	DSM 15089
Clostridiisalibacter paucivorans DSM 22131	1121289	PRJNA220997	220997	Terrabacteria group	Firmicutes	3.25063	31.5	-	JHVL01	85	3168	3014	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02952991	GCA_000620125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/125/GCA_000620125.1_ASM62012v1	-	DSM 22131
Deefgea rivuli DSM 18356	1121375	PRJNA220991	220991	Proteobacteria	Betaproteobacteria	3.71198	49	-	JHVM01	23	3437	3314	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02952992	GCA_000620145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/145/GCA_000620145.1_ASM62014v1	-	DSM 18356
Anoxybacillus tepidamans PS2	1382358	PRJNA214279	214279	Terrabacteria group	Firmicutes	3.364	43	-	JHVN01	45	3477	3292	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02952993	GCA_000620165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/165/GCA_000620165.1_ASM62016v1	-	PS2
Geodermatophilaceae bacterium URHB0062	1380353	PRJNA213790	213790	Terrabacteria group	Actinobacteria	5.09304	72.6	-	JHVO01	23	4800	4639	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02952994	GCA_000620185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/185/GCA_000620185.1_ASM62018v1	-	URHB0062
Geodermatophilaceae bacterium URHA0031	1380393	PRJNA213781	213781	Terrabacteria group	Actinobacteria	5.23692	73.9	-	JHVP01	29	4952	4793	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02952995	GCA_000620205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/205/GCA_000620205.1_ASM62020v1	-	URHA0031
Intrasporangiaceae bacterium URHB0013	1380370	PRJNA213758	213758	Terrabacteria group	Actinobacteria	4.56771	70.9	-	JIBA01	17	4142	3985	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743946	GCA_000620545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/545/GCA_000620545.1_ASM62054v1	-	URHB0013
Dongia sp. URHE0060	1380391	PRJNA213779	213779	Proteobacteria	Alphaproteobacteria	6.06726	63.7	-	JIAS01	19	5764	5596	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743967	GCA_000620685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/685/GCA_000620685.1_ASM62068v1	-	URHE0060
Acidobacteriaceae bacterium URHE0068	1380348	PRJNA213785	213785	Acidobacteria	Acidobacteriia	6.67919	60.2	-	JIAQ01	83	5515	5310	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743954	GCA_000620725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/725/GCA_000620725.1_ASM62072v1	-	URHE0068
Desulfovermiculus halophilus DSM 18834	1121433	PRJNA215336	215336	Proteobacteria	delta/epsilon subdivisions	3.24209	56.8	-	JIAK01	71	3034	2903	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02743957	GCA_000620765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/765/GCA_000620765.1_ASM62076v1	-	DSM 18834
Pseudonocardia acaciae DSM 45401	1123023	PRJNA215346	215346	Terrabacteria group	Actinobacteria	9.93133	72.3	-	JIAI01	94	9462	9165	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02743958	GCA_000620785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/785/GCA_000620785.1_ASM62078v1	-	DSM 45401
Exiguobacterium marinum DSM 16307	1397696	PRJNA218045	218045	Terrabacteria group	Firmicutes	2.81402	47.4	-	JHZT01	2	2871	2760	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02743964	GCA_000620845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/845/GCA_000620845.1_ASM62084v1	25323723	DSM 16307
Conchiformibius steedae DSM 2580	1121352	PRJNA220992	220992	Proteobacteria	Betaproteobacteria	2.14649	50.8	-	JHZP01	23	2117	2011	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02743966	GCA_000620925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/925/GCA_000620925.1_ASM62092v1	-	DSM 2580
[Clostridium] viride DSM 6836	1121344	PRJNA220996	220996	Terrabacteria group	Firmicutes	2.41548	49.3	-	JHZO01	7	2346	2250	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02743968	GCA_000620945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/945/GCA_000620945.1_ASM62094v1	-	DSM 6836
Brackiella oedipodis DSM 13743	1121118	PRJNA221006	221006	Proteobacteria	Betaproteobacteria	1.9221	46.5	-	JHZJ01	9	1707	1652	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02743971	GCA_000621025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/025/GCA_000621025.1_ASM62102v1	-	DSM 13743
Mycoplasma gallinarum DSM 19816	1122248	PRJNA221017	221017	Terrabacteria group	Tenericutes	0.834674	26.4	-	JHZE01	13	703	652	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743976	GCA_000621085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/085/GCA_000621085.1_ASM62108v1	-	DSM 19816
Prolixibacter bellariivorans ATCC BAA-1284	1408473	PRJNA223119	223119	FCB group	Bacteroidetes/Chlorobi group	5.15125	44.2	-	JHXO01	21	4225	4138	4/8/14	4/18/17	Scaffold	DOE Joint Genome Institute	SAMN02744005	GCA_000621705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/705/GCA_000621705.1_ASM62170v1	-	ATCC BAA-1284
Bacteroides sartorii	671267	PRJNA175977	175977	FCB group	Bacteroidetes/Chlorobi group	5.46421	43.9	-	ASSP01	20	4590	4324	5/29/13	7/24/17	Scaffold	Broad Institute	SAMN01730986	GCA_000403195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/195/GCA_000403195.2_Bact_mass_dnLKV3_V1	-	dnLKV3
Mannheimia granulomatis DSM 19156	1122190	PRJNA221028	221028	Proteobacteria	Gammaproteobacteria	2.2713	39.8	-	JHZD01	10	2163	2045	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02743975	GCA_000621105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/105/GCA_000621105.1_ASM62110v1	-	DSM 19156
Maribacter antarcticus DSM 21422	1122191	PRJNA221031	221031	FCB group	Bacteroidetes/Chlorobi group	4.85301	37.4	-	JHZC01	32	4172	3930	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02743978	GCA_000621125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/125/GCA_000621125.1_ASM62112v1	-	DSM 21422
Desulfobulbus elongatus DSM 2908	1121402	PRJNA221033	221033	Proteobacteria	delta/epsilon subdivisions	3.96195	61.7	-	JHZB01	99	3575	3377	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02743974	GCA_000621145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/145/GCA_000621145.1_ASM62114v1	-	DSM 2908
Sinorhizobium meliloti	382	PRJNA361251	361251	Proteobacteria	Alphaproteobacteria	6.141	62.3939	chromosome:NZ_CP019485.1/CP019485.1; plasmid pSymA:NZ_CP019483.1/CP019483.1; plasmid pSymB:NZ_CP019484.1/CP019484.1	-	3	6127	5695	9/14/17	9/16/17	Complete Genome	National Institute of Agricultural Technology (INTA)	SAMN06227501	GCA_002302355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/355/GCA_002302355.1_ASM230235v1	-	B401
Lactobacillus hayakitensis DSM 18933 = JCM 14209	1423755	PRJDB650	243231	Terrabacteria group	Firmicutes	1.66732	34	-	BAML01	82	1662	1471	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00008721	GCA_000615845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/845/GCA_000615845.1_ASM61584v1	-	JCM 14209
Thiothrix lacustris DSM 21227	1123401	PRJNA221065	221065	Proteobacteria	Gammaproteobacteria	3.71868	51.3	-	JHYQ01	50	3654	3495	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02743987	GCA_000621325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/325/GCA_000621325.1_ASM62132v1	-	DSM 21227
Legionella geestiana	45065	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	2.54565	51.1	-	LNYC01	80	2328	2221	12/15/15	4/11/17	Scaffold	Tel Aviv University	SAMN04274774	GCA_001467645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/645/GCA_001467645.1_ASM146764v1	26752266	ATCC 49504
Legionella cherrii	28084	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	3.98213	38.9	-	LNXW01	14	3482	3283	12/15/15	4/11/17	Scaffold	Tel Aviv University	SAMN04274768	GCA_001467035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/035/GCA_001467035.1_ASM146703v1	26752266	ORW
Lachnospiraceae bacterium AC3007	1408322	PRJNA223011	223011	Terrabacteria group	Firmicutes	2.94424	47.6	-	JHYK01	51	2672	2545	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743990	GCA_000621405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/405/GCA_000621405.1_ASM62140v1	-	AC3007
Lachnospiraceae bacterium AB2028	1408319	PRJNA223012	223012	Terrabacteria group	Firmicutes	3.47632	43.6	-	JHYJ01	22	3071	2977	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743996	GCA_000621425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/425/GCA_000621425.1_ASM62142v1	-	AB2028
Bacillus bogoriensis ATCC BAA-922	1408424	PRJNA223013	223013	Terrabacteria group	Firmicutes	5.0024	36.7	-	JHYI01	51	4877	4716	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02743995	GCA_000621445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/445/GCA_000621445.1_ASM62144v1	-	ATCC BAA-922
Alkaliphilus transvaalensis ATCC 700919	1408422	PRJNA223027	223027	Terrabacteria group	Firmicutes	4.02484	34	-	JHYF01	44	3745	3640	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02743997	GCA_000621485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/485/GCA_000621485.1_ASM62148v1	-	ATCC 700919
[Clostridium] cellobioparum DSM 1351 = ATCC 15832	1121303	PRJNA223036	223036	Terrabacteria group	Firmicutes	6.13222	41.4	-	JHYD01	80	5206	4997	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02743992	GCA_000621505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/505/GCA_000621505.1_ASM62150v1	-	ATCC 15832
Legionella fairfieldensis ATCC 49588	1408444	PRJNA223037	223037	Proteobacteria	Gammaproteobacteria	2.65659	39.7	-	JHYC01	57	2547	2403	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02743993	GCA_000621525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/525/GCA_000621525.1_ASM62152v1	-	ATCC 49588
Crocinitomix catalasitica ATCC 23190	1408433	PRJNA223059	223059	FCB group	Bacteroidetes/Chlorobi group	4.62289	34.1	-	JHXV01	71	4082	3954	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02744008	GCA_000621625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/625/GCA_000621625.1_ASM62162v1	-	ATCC 23190
Legionella sainthelensi ATCC 35248	1408445	PRJNA223118	223118	Proteobacteria	Gammaproteobacteria	4.10823	37	-	JHXP01	62	3596	3366	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02744009	GCA_000621685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/685/GCA_000621685.1_ASM62168v1	-	ATCC 35248
Ruminococcaceae bacterium AB4001	1410638	PRJNA223440	223440	Terrabacteria group	Firmicutes	3.24806	45.7	-	JHXJ01	54	2841	2704	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02744006	GCA_000621765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/765/GCA_000621765.1_ASM62176v1	-	AB4001
Lachnospiraceae bacterium NC2004	1410626	PRJNA223464	223464	Terrabacteria group	Firmicutes	3.3731	39.4	-	JHXB01	56	2874	2768	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02744018	GCA_000621905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/905/GCA_000621905.1_ASM62190v1	-	NC2004
Methanobrevibacter wolinii SH	1410664	PRJNA223477	223477	Euryarchaeota	Methanobacteria	2.04181	24.2	-	JHWX01	26	1735	1670	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02744021	GCA_000621965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/965/GCA_000621965.1_ASM62196v1	-	SH
Lachnospiraceae bacterium V9D3004	1410632	PRJNA223478	223478	Terrabacteria group	Firmicutes	3.41836	40.6	-	JHWW01	32	2764	2637	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02744022	GCA_000621985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/985/GCA_000621985.1_ASM62198v1	-	V9D3004
Lachnospiraceae bacterium AD3010	1410621	PRJNA223480	223480	Terrabacteria group	Firmicutes	3.55499	45.7	-	JHWU01	46	3230	3064	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02744023	GCA_000622025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/025/GCA_000622025.1_ASM62202v1	-	AD3010
Lachnospiraceae bacterium MD2004	1410625	PRJNA223499	223499	Terrabacteria group	Firmicutes	2.53228	41.2	-	JHWK01	10	2345	2254	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02744028	GCA_000622105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/105/GCA_000622105.1_ASM62210v1	-	MD2004
Paenarthrobacter aurescens TC1	290340	PRJNA12512	12512	Terrabacteria group	Actinobacteria	5.22665	62.3869	chromosome:NC_008711.1/CP000474.1; plasmid TC1:NC_008712.1/CP000475.1; plasmid TC2:NC_008713.1/CP000476.1	-	3	4806	4662	12/26/06	8/28/17	Complete Genome	TIGR	SAMN02604022	GCA_000014925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/925/GCA_000014925.1_ASM1492v1	17194220	TC1
Mycoplasma molare ATCC 27746	1448132	PRJNA234404	234404	Terrabacteria group	Tenericutes	0.842941	24.9	-	JHWG01	24	743	697	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02744029	GCA_000622165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/165/GCA_000622165.1_ASM62216v1	-	ATCC 27746
Legionella lansingensis DSM 19556 = ATCC 49751	1122164	PRJNA234422	234422	Proteobacteria	Gammaproteobacteria	2.9131	40.6	-	JHWF01	59	2732	2572	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02744032	GCA_000622185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/185/GCA_000622185.1_ASM62218v1	-	ATCC 49751
Mycoplasma leonicaptivi ATCC 49890	1448135	PRJNA234423	234423	Terrabacteria group	Tenericutes	0.901123	24.9	-	JHWE01	80	806	684	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02744030	GCA_000622205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/205/GCA_000622205.1_ASM62220v1	-	ATCC 49890
Roseomonas mucosa ATCC BAA-692	1448136	PRJNA234425	234425	Proteobacteria	Alphaproteobacteria	4.86458	70.4	-	JHWD01	77	4461	4259	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02744033	GCA_000622225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/225/GCA_000622225.1_ASM62222v1	-	ATCC BAA-692
Fusobacterium perfoetens ATCC 29250	1408439	PRJNA223056	223056	Fusobacteria	Fusobacteriia	2.10301	26	-	JHXW01	25	1995	1894	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743999	GCA_000622245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/245/GCA_000622245.1_ASM62224v1	-	ATCC 29250
Sulfitobacter mediterraneus KCTC 32188	1443112	PRJNA233445	233445	Proteobacteria	Alphaproteobacteria	4.13108	58.1	-	JASH01	31	4052	3922	4/8/14	4/9/17	Contig	Yonsei University	SAMN02721579	GCA_000622345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/345/GCA_000622345.1_32188_draft	-	KCTC 32188
Martelella mediterranea DSM 17316	1122214	PRJNA362295	362295	Proteobacteria	Alphaproteobacteria	5.69307	62.3845	chromosome:NZ_CP020330.1/CP020330.1; plasmid pMM170:NZ_CP020333.1/CP020333.1; plasmid pMM259:NZ_CP020332.1/CP020332.1; plasmid pMM593:NZ_CP020331.1/CP020331.1	-	4	5292	5106	3/20/17	3/22/17	Complete Genome	Leibniz Institute DSMZ	SAMN02441730	GCA_002043005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/005/GCA_002043005.1_ASM204300v1	-	MACL11
Mycobacterium austroafricanum	39687	PRJEB5747	240183	Terrabacteria group	Actinobacteria	6.77097	67.4	-	CCAW01	20	6450	6159	3/19/14	4/17/17	Scaffold	URMITE	SAMEA3138973	GCA_000612725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/725/GCA_000612725.1_PRJEB5747_assembly_1	24744336	DSM 44191
Oceanobacillus picturae	171693	PRJEB5522	242322	Terrabacteria group	Firmicutes	3.67517	39.2	-	CCAX01	5	3691	3581	3/19/14	4/9/17	Contig	URMITE	SAMEA3138980	GCA_000612865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/865/GCA_000612865.1_PRJEB5522_assembly_1	-	S1
Mycobacterium vulneris	547163	PRJEB5750	240190	Terrabacteria group	Actinobacteria	6.98144	66.7	-	CCBG01	4	6668	6496	3/26/14	4/9/17	Contig	URMITE	SAMEA3138981	GCA_000612885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/885/GCA_000612885.1_PRJEB5750_assembly_1	24812218	DSM 45247
Photobacterium phosphoreum ANT-2200	1454202	PRJEB5262	242244	Proteobacteria	Gammaproteobacteria	5.06834	38.9	-	CCAR02	3	4526	4284	3/18/14	4/11/17	Scaffold	GENOSCOPE CEA	SAMEA3138989	GCA_000613045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/045/GCA_000613045.2_BDW_PRJEB5262	-	ANT-2200
Mycobacterium cosmeticum	258533	PRJEB5748	240184	Terrabacteria group	Actinobacteria	6.46209	68.2	-	CCBB01	5	6284	6147	3/20/14	4/17/17	Contig	URMITE	SAMEA3138996	GCA_000613185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/185/GCA_000613185.1_PRJEB5748_assembly_1	-	DSM 44829
Lactobacillus sucicola DSM 21376 = JCM 15457	1423806	PRJDB622	242665	Terrabacteria group	Firmicutes	2.45464	38.4	-	BALC01	15	2338	2047	3/27/14	4/9/17	Contig	The University of Tokyo	SAMD00009355	GCA_000612445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/445/GCA_000612445.1_ASM61244v1	24812225	JCM 15457
halophilic archaeon DL31	756883	PRJNA52855	52855	unclassified Archaea	unclassified Archaea (miscellaneous)	3.64316	62.3733	chromosome:NC_015954.1/CP002988.1; plasmid phalar01:NC_015955.1/CP002989.1; plasmid phalar02:NC_015959.1/CP002990.1	-	3	3653	3370	8/26/11	9/4/17	Complete Genome	DOE Joint Genome Institute	SAMN02232027	GCA_000224475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/475/GCA_000224475.1_ASM22447v1	-	DL31
Asaia prunellae JCM 25354	1236502	PRJDB589	243164	Proteobacteria	Alphaproteobacteria	3.18274	55.8	-	BAJV01	38	2963	2317	4/1/14	4/17/17	Contig	The University of Tokyo	SAMD00004065	GCA_000613885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/885/GCA_000613885.1_ASM61388v1	-	JCM 25354
Bacteroides faecichinchillae JCM 17102	1236513	PRJDB601	243176	FCB group	Bacteroidetes/Chlorobi group	4.78258	38.7	-	BAKK01	144	4098	3280	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00004031	GCA_000614145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/145/GCA_000614145.1_ASM61414v1	-	JCM 17102
Pseudomonas mendocina S5.2	1225174	PRJNA173199	173199	Proteobacteria	Gammaproteobacteria	5.37247	62.3665	chromosome:NZ_CP013124.1/CP013124.1; plasmid unnamed:NZ_CP013125.1/CP013125.1	-	2	5095	4972	11/9/15	4/5/17	Complete Genome	University of Malaya	SAMN02728191	GCA_000733715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/715/GCA_000733715.2_ASM73371v2	-	S5.2
Lactobacillus hamsteri DSM 5661 = JCM 6256	1423754	PRJDB644	243223	Terrabacteria group	Firmicutes	1.82649	35.1	-	BALY01	81	1794	1579	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00003823	GCA_000615445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/445/GCA_000615445.1_ASM61544v1	-	JCM 6256
Lactobacillus fuchuensis DSM 14340 = JCM 11249	1423747	PRJDB648	243229	Terrabacteria group	Firmicutes	2.10744	41.8	-	BAMJ01	71	2048	1777	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00010816	GCA_000615805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/805/GCA_000615805.1_ASM61580v1	-	JCM 11249
Herminiimonas sp. CN	1349818	PRJNA209422	209422	Proteobacteria	Betaproteobacteria	3.38088	58.9	-	AVCC01	131	3250	3101	3/25/14	4/9/17	Contig	Chungbuk National University	SAMN02951887	GCA_000622895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/895/GCA_000622895.1_Herminiimonas_sp._CN_genome	24632261	CN
Rhodococcus sp. YL-1	1045808	PRJNA343344	343344	Terrabacteria group	Actinobacteria	7.59496	62.3652	chromosome:NZ_CP017299.1/CP017299.1; plasmid pYLC1:NZ_CP017300.1/CP017300.1; plasmid pYLC2:NZ_CP017301.1/CP017301.1; plasmid pYLC3:NZ_CP017302.1/CP017302.1; plasmid pYLL1:NZ_CP017303.1/CP017303.1; plasmid pYLL2:NZ_CP017304.1/CP017304.1	-	6	7109	6887	1/10/17	4/17/17	Complete Genome	NJAU	SAMN05786337	GCA_001942025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/025/GCA_001942025.1_ASM194202v1	-	YL-1
Sinorhizobium sp. CCBAU 05631	794846	PRJNA353922	353922	Proteobacteria	Alphaproteobacteria	6.38735	62.3581	chromosome:NZ_CP023063.1/CP023063.1; plasmid pSS05631a:NZ_CP023065.1/CP023065.1; plasmid pSS05631b:NZ_CP023064.1/CP023064.1; plasmid pSS05631d:NZ_CP023066.1/CP023066.1	-	4	6167	5653	9/8/17	9/11/17	Complete Genome	China Agricultural University	SAMN07445559	GCA_002288505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/505/GCA_002288505.1_ASM228850v1	-	CCBAU 05631
Lactobacillus paralimentarius DSM 13961 = JCM 10707	1423765	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.74658	35.1	-	AZDH01	28	2639	2556	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369457	GCA_001435445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/445/GCA_001435445.1_ASM143544v1	26415554	DSM 13961
Sneathiella glossodoripedis JCM 23214	1236958	PRJDB657	243242	Proteobacteria	Alphaproteobacteria	3.62939	46.9	-	BAMS01	12	3613	3197	4/1/14	4/17/17	Contig	The University of Tokyo	SAMD00008912	GCA_000616095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/095/GCA_000616095.1_ASM61609v1	-	JCM 23214
Leisingera methylohalidivorans DSM 14336	999552	PRJNA74371	74371	Proteobacteria	Alphaproteobacteria	4.651	62.3557	chromosome:NC_023135.1/CP006773.1; plasmid unnamed:NC_023146.1/CP006774.1; plasmid unnamed2:NC_023136.1/CP006775.1	-	3	4521	4211	12/20/13	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02769646	GCA_000511355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/355/GCA_000511355.1_ASM51135v1	-	DSM 14336; MB2
Oligotropha carboxidovorans OM5	504832	PRJNA41025	41025	Proteobacteria	Alphaproteobacteria	3.89607	62.3535	chromosome:NC_015684.1/CP002826.1; plasmid pHCG3:NC_015689.1/CP002827.1; plasmid pOC167:NC_015685.1/CP002828.1	-	3	3765	3687	6/15/11	4/7/17	Complete Genome	Georg-August Universität Göttingen	SAMN02603254	GCA_000218565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/565/GCA_000218565.1_ASM21856v1	21742883	OM5
Oligotropha carboxidovorans OM4	1031710	PRJNA66839	66839	Proteobacteria	Alphaproteobacteria	3.83977	62.3514	chromosome:NC_017538.1/CP002821.1; plasmid pHCG3B:NC_017536.1/CP002822.1; plasmid pOC167B:NC_017539.1/CP002823.1	-	3	3712	3618	6/15/11	4/7/17	Complete Genome	Georg-August-University Goettingen	SAMN02603268	GCA_000218585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/585/GCA_000218585.1_ASM21858v1	21742883	OM4
Acetobacter papayae JCM 25143	1234671	PRJDB553	243136	Proteobacteria	Alphaproteobacteria	3.04108	59.3	-	BAIN01	177	2923	1969	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00008625	GCA_000613285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/285/GCA_000613285.1_ASM61328v1	-	JCM 25143
Komagataeibacter kakiaceti JCM 25156	1234672	PRJDB554	243137	Proteobacteria	Alphaproteobacteria	3.1331	62.1	-	BAIO01	947	3019	1833	4/1/14	4/17/17	Contig	The University of Tokyo	SAMD00004030	GCA_000613305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/305/GCA_000613305.1_ASM61330v1	-	JCM 25156
Acetobacter okinawensis JCM 25146	1236501	PRJDB588	243163	Proteobacteria	Alphaproteobacteria	3.16624	57.6	-	BAJU01	127	3042	2238	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00009357	GCA_000613865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/865/GCA_000613865.1_ASM61386v1	-	JCM 25146
Candidatus Acidianus copahuensis	1160895	PRJNA240874	240874	TACK group	Crenarchaeota	2.45402	35.6	-	JFZT01	68	2508	2376	4/15/14	4/9/17	Contig	INDEAR	SAMN02679956	GCA_000632495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/495/GCA_000632495.1_AciCop1.0	24812211	ALE1
Pseudomonas bauzanensis	653930	PRJEB17025	351205	Proteobacteria	Gammaproteobacteria	3.54273	60.3	-	FOGN01	16	3302	3199	10/29/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216589	GCA_900111225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/225/GCA_900111225.1_IMG-taxon_2671180106_annotated_assembly	-	DSM 22558
Lactobacillus apodemi DSM 16634 = JCM 16172	1423724	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.09118	38.6	-	AZFT01	54	2043	1917	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369391	GCA_001434405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/405/GCA_001434405.1_ASM143440v1	26415554	DSM 16634
Rhodococcus sp. 008	1723645	PRJNA296603	296603	Terrabacteria group	Actinobacteria	7.43832	62.3478	chromosome:NZ_CP012749.1/CP012749.1; plasmid pR8C1:NZ_CP015204.1/CP015204.1; plasmid pR8C2:NZ_CP015205.1/CP015205.1; plasmid pR8L1:NZ_CP015203.1/CP015203.1	-	4	6964	6767	7/8/16	4/13/17	Complete Genome	University of Manitoba	SAMN04101985	GCA_001682295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/295/GCA_001682295.1_ASM168229v1	-	8
Pseudomonas otitidis	319939	PRJEB17072	351138	Proteobacteria	Gammaproteobacteria	6.34474	66.8	-	FOJP01	50	5836	5671	10/31/16	4/14/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216263	GCA_900111835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/835/GCA_900111835.1_IMG-taxon_2663762781_annotated_assembly	-	DSM 17224
Rhodococcus sp. BH4	1807790	PRJNA313101	313101	Terrabacteria group	Actinobacteria	7.01915	62.3395	chromosome:NZ_CP014941.1/CP014941.1; plasmid unnamed:NZ_CP014942.1/CP014942.1	-	2	6533	6362	4/5/17	4/8/17	Complete Genome	KRIBB	SAMN04538165	GCA_002079265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/265/GCA_002079265.1_ASM207926v1	-	BH4
Sphingobium sp. MI1205	407020	PRJNA196450	196450	Proteobacteria	Alphaproteobacteria	4.61937	62.3365	chromosome 1:NZ_CP005188.1/CP005188.1; chromosome 2:NZ_CP005189.1/CP005189.1; plasmid pMI1:NZ_CP005190.1/CP005190.1; plasmid pMI2:NZ_CP005191.1/CP005191.1; plasmid pMI3:NZ_CP005192.1/CP005192.1; plasmid pMI4:NZ_CP005193.1/CP005193.1	-	6	4638	4425	2/18/16	4/16/17	Complete Genome	"Graduate School of Life Sciences, Tohoku University"	SAMN04497574	GCA_001563285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/285/GCA_001563285.1_ASM156328v1	27056230	MI1205
Ketogulonicigenium robustum	92947	PRJNA359416	359416	Proteobacteria	Alphaproteobacteria	2.71383	62.3303	chromosome:NZ_CP019937.1/CP019937.1; plasmid unnamed1:NZ_CP019938.1/CP019938.1; plasmid unnamed2:NZ_CP019939.1/CP019939.1; plasmid unnamed3:NZ_CP019940.1/CP019940.1; plasmid unnamed4:NZ_CP019941.1/CP019941.1; plasmid unnamed5:NZ_CP019942.1/CP019942.1	-	6	2674	2545	5/2/17	5/6/17	Complete Genome	Shenyang Pharmaceutical University	SAMN06191729	GCA_002117445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/445/GCA_002117445.1_ASM211744v1	-	SPU_B003
Sphingobium lucknowense F2	1450518	PRJNA235369	235369	Proteobacteria	Alphaproteobacteria	4.44276	64.3	-	JANF02	103	4278	4054	4/18/14	4/17/17	Contig	University of Delhi	SAMN02729436	GCA_000633575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/575/GCA_000633575.2_de_novo_sequence_assembly	25103767	F2
Clostridium drakei	332101	PRJNA243411	243411	Terrabacteria group	Firmicutes	5.57877	29.5	-	JIBU02	122	5039	4831	4/18/14	4/17/17	Scaffold	KAIST	SAMN02716634	GCA_000633595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/595/GCA_000633595.2_ASM63359v2	24831144	SL1
Rhodomicrobium udaipurense JA643	858455	PRJNA222719	222719	Proteobacteria	Alphaproteobacteria	3.63111	62.5	-	JFZJ01	256	3458	3192	4/22/14	4/9/17	Contig	University of Hyderabad	SAMN02375020	GCA_000636015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/015/GCA_000636015.1_ASM63601v1	-	JA643
Sulfitobacter pontiacus	60137	PRJEB16587	349873	Proteobacteria	Alphaproteobacteria	3.76215	60.3	-	FNNB01	24	3693	3584	10/22/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488041	GCA_900106935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/935/GCA_900106935.1_IMG-taxon_2622736431_annotated_assembly	-	DSM 10014
Rhodococcus erythropolis R138	1289591	PRJNA188397	188397	Terrabacteria group	Actinobacteria	6.80651	62.3283	chromosome:NZ_CP007255.1/CP007255.1; plasmid pCRE138:NZ_CP007256.1/CP007256.1; plasmid pLRE138:NZ_CP007257.1/CP007257.1	-	3	6301	6130	12/30/15	4/4/17	Complete Genome	Institut des Sciences du vegetal	SAMN02639992	GCA_000696675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/675/GCA_000696675.2_ASM69667v2	24675862	R138
Sodalis-like symbiont of Philaenus spumarius	1189304	PRJDB97	244456	Proteobacteria	Gammaproteobacteria	1.38668	54.1	-	BASS01	562	-	-	4/15/14	9/16/15	Scaffold	National Institute of Advanced Industrial Science and Technology	SAMD00036757	GCA_000647915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/915/GCA_000647915.1_ASM64791v1	24401857	PSPU
Actibacterium mucosum KCTC 23349	1454373	PRJNA236541	236541	Proteobacteria	Alphaproteobacteria	3.71534	60.8	-	JFKE01	22	3712	3641	4/24/14	4/9/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02671722	GCA_000647975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/975/GCA_000647975.1_SOAPdenovo_v1.05	24855309	KCTC 23349
Neochlamydia sp. S13	1353976	PRJDB1385	245080	PVC group	Chlamydiae	3.18707	38	-	BASK01	1342	2444	2232	4/22/14	3/22/17	Contig	"Faculty of Health Scieneces, Hokkaido University"	SAMD00036751	GCA_000648235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/235/GCA_000648235.1_ASM64823v1	24747986	S13
Sporolactobacillus terrae DSM 11697	1444306	PRJNA233635	233635	Terrabacteria group	Firmicutes	3.2042	45.3	-	JFZC01	101	3135	2994	4/28/14	4/9/17	Contig	"State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University"	SAMN02739294	GCA_000648615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/615/GCA_000648615.1_DSM_11697	24874673	DSM 11697
Candidatus Protochlamydia sp. R18	1353977	PRJDB1386	245081	PVC group	Chlamydiae	2.7227	34.8	-	BASL01	795	2253	2006	4/22/14	3/22/17	Contig	"Faculty of Health Scieneces, Hokkaido University"	SAMD00036752	GCA_000648255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/255/GCA_000648255.1_ASM64825v1	24747986	S13
Holospora elegans E1	1427503	PRJDB1531	228943	Proteobacteria	Alphaproteobacteria	1.26833	36	-	BAUP01	152	1383	1127	4/12/14	4/17/17	Contig	Yamaguchi University	SAMD00036778	GCA_000648275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/275/GCA_000648275.1_ASM64827v1	25115770	E1
Paenibacillus darwinianus	1380763	PRJNA238414	238414	Terrabacteria group	Firmicutes	3.00445	56.8	-	JFHT01	111	2986	2669	3/19/14	4/9/17	Scaffold	University of Auckland	SAMN02644516	GCA_000598065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/065/GCA_000598065.1_Brdraft1	25285990	Br
Pseudomonas moraviensis	321662	PRJEB16479	349377	Proteobacteria	Gammaproteobacteria	6.09254	60.2	chromosome I:NZ_LT629788.1/LT629788.1	-	1	5435	5264	10/21/16	4/13/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04490196	GCA_900105805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/805/GCA_900105805.1_IMG-taxon_2639762633_annotated_assembly	-	BS3668
Actibacterium sp. JN33	2029103	PRJNA398625	398625	Proteobacteria	Alphaproteobacteria	3.49448	57.8	-	NSBU01	7	3389	3296	9/5/17	9/7/17	Scaffold	"Second Institute of Oceanography, State Oceanic Administration"	SAMN07514660	GCA_002285415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/415/GCA_002285415.1_ASM228541v1	-	JN33
Peptococcaceae bacterium SCADC1_2_3	1487582	PRJNA243645	243645	Terrabacteria group	Firmicutes	2.59395	42.9	-	JJNX02	259	2318	2209	5/5/14	9/25/14	Contig	Hydrocarbon Metagenomic Project	SAMN02719768	GCA_000681355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/355/GCA_000681355.2_SCADC1_2_3	25212628	-
Candidatus Methanoperedens nitroreducens	1392998	PRJEB20370	403988	Euryarchaeota	Methanomicrobia	3.52474	44.1	-	FZMP01	250	4179	4104	9/12/17	9/23/17	Contig	RADBOUD UNIVERSITY NIJMEGEN	SAMEA104141092	GCA_900196725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/725/GCA_900196725.1_MNV_PRJEB20370_wgs	-	-
Candidatus Nitrosotenuis chungbukensis	1353246	PRJNA210247	210247	TACK group	Thaumarchaeota	1.76297	41.8	-	AVSQ01	24	2035	1952	5/7/14	4/9/17	Contig	Chungbuk National University	SAMN02767256	GCA_000685395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/395/GCA_000685395.1_NKMY2	24705324	MY2
Entomoplasma melaleucae ATCC 49191	1408435	PRJNA223073	223073	Terrabacteria group	Tenericutes	0.82289	26.5	-	JMKX01	8	869	799	5/8/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02743375	GCA_000685885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/885/GCA_000685885.1_ASM68588v1	-	ATCC 49191
Mycoplasma pirum ATCC 25960	1408467	PRJNA223091	223091	Terrabacteria group	Tenericutes	0.839829	24.2	-	JMKZ01	6	718	668	5/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743357	GCA_000685905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/905/GCA_000685905.1_ASM68590v1	-	ATCC 25960
Fodinicurvata fenggangensis DSM 21160	570967	PRJNA235022	235022	Proteobacteria	Alphaproteobacteria	3.76975	61	-	JMLV01	37	3593	3449	5/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743382	GCA_000686045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/045/GCA_000686045.1_ASM68604v1	-	DSM 21160
Robinsoniella sp. KNHs210	1469950	PRJNA239508	239508	Terrabacteria group	Firmicutes	7.56157	41.1	-	JMLZ01	4	6045	5857	5/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743373	GCA_000686105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/105/GCA_000686105.1_ASM68610v1	-	KNHs210
Peptostreptococcaceae bacterium VA2	1476973	PRJNA242133	242133	Terrabacteria group	Firmicutes	3.58348	28.6	-	JMMB01	11	3568	3210	5/8/14	4/10/17	Contig	DOE Joint Genome Institute	SAMN02743383	GCA_000686145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/145/GCA_000686145.1_ASM68614v1	-	VA2
Desulfotomaculum thermocisternum DSM 10259	1121430	PRJNA234877	234877	Terrabacteria group	Firmicutes	2.65487	54.7	-	JMLG01	45	2718	2562	5/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02743376	GCA_000686645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/645/GCA_000686645.1_ASM68664v1	-	DSM 10259
[Clostridium] saccharogumia DSM 17460	1121333	PRJNA234878	234878	Terrabacteria group	Firmicutes	3.14344	30.2	-	JMLH01	133	2856	2632	5/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02743355	GCA_000686665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/665/GCA_000686665.1_ASM68666v1	-	DSM 17460
Clostridium hydrogeniformans DSM 21757	1121319	PRJNA234891	234891	Terrabacteria group	Firmicutes	4.10151	29.4	-	JMLJ01	31	3755	3632	5/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02743370	GCA_000686705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/705/GCA_000686705.1_ASM68670v1	-	DSM 21757
Clostridium akagii DSM 12554	1121293	PRJNA234894	234894	Terrabacteria group	Firmicutes	4.58951	30.7	-	JMLK01	50	4350	4131	5/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02743371	GCA_000686725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/725/GCA_000686725.1_ASM68672v1	-	DSM 12554
Flavobacterium sasangense DSM 21067	1121896	PRJNA234968	234968	FCB group	Bacteroidetes/Chlorobi group	3.15874	32.3	-	JMLU01	67	2996	2875	5/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02743358	GCA_000686885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/885/GCA_000686885.1_ASM68688v1	-	DSM 21067
Marinospirillum insulare DSM 21763	1122211	PRJNA235033	235033	Proteobacteria	Gammaproteobacteria	2.92043	43.1	-	JMLW01	70	2857	2704	5/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02743374	GCA_000686905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/905/GCA_000686905.1_ASM68690v1	-	DSM 21763
Thermoanaerobaculum aquaticum	1312852	PRJNA245240	245240	Acidobacteria	unclassified Acidobacteria	2.66093	63	-	JMFG01	68	2403	2281	5/8/14	4/9/17	Scaffold	University of Oklahoma	SAMN02732492	GCA_000687145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/145/GCA_000687145.1_TheAqu1.0	24926055	MP-01
Acidovorax oryzae ATCC 19882	1408420	PRJNA223028	223028	Proteobacteria	Betaproteobacteria	5.52678	68.7	-	JMKU01	69	4902	4728	5/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02743377	GCA_000687165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/165/GCA_000687165.1_ASM68716v1	-	ATCC 19882
Paraburkholderia phytofirmans PsJN	398527	PRJNA17463	17463	Proteobacteria	Betaproteobacteria	8.21466	62.3159	chromosome 1:NC_010681.1/CP001052.1; chromosome 2:NC_010676.1/CP001053.1; plasmid pBPHYT01:NC_010679.1/CP001054.1	-	3	7430	7188	5/7/08	8/28/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598395	GCA_000020125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/125/GCA_000020125.1_ASM2012v1	"2,155,130,822,099,510"	PsJN
Desulfonatronovibrio hydrogenovorans DSM 9292	1121413	PRJNA219142	219142	Proteobacteria	delta/epsilon subdivisions	2.9397	50.3	-	JMKT01	16	2842	2761	5/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02743346	GCA_000686525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/525/GCA_000686525.1_ASM68652v1	-	DSM 9292
Mesoplasma syrphidae ATCC 51578	1408449	PRJNA223038	223038	Terrabacteria group	Tenericutes	0.916605	30.3	-	JMKV01	8	799	742	5/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02743351	GCA_000686545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/545/GCA_000686545.1_ASM68654v1	-	ATCC 51578
Mycoplasma lipofaciens ATCC 35015	1408465	PRJNA223082	223082	Terrabacteria group	Tenericutes	0.778716	25.4	-	JMKY01	6	692	639	5/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02743372	GCA_000686585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/585/GCA_000686585.1_ASM68658v1	-	ATCC 35015
Sphingobacterium thalpophilum DSM 11723	1123265	PRJNA234806	234806	FCB group	Bacteroidetes/Chlorobi group	5.90434	43.6	-	JMLD01	31	5089	4921	5/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743379	GCA_000686625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/625/GCA_000686625.1_ASM68662v1	-	DSM 11723
Aeromonas enteropelogenes	29489	PRJNA245216	245216	Proteobacteria	Gammaproteobacteria	4.33223	60	-	JMGO02	18	3952	3789	5/9/14	4/12/17	Contig	Universidade Federal do Parana (UFPR)	SAMN02732394	GCA_000687355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/355/GCA_000687355.2_ASM68735v2	-	1999lcr
Defluviimonas sp. 20V17	1417296	PRJNA226259	226259	Proteobacteria	Alphaproteobacteria	4.26026	66.3	-	AYXI01	236	4150	3868	5/9/14	4/9/17	Contig	"Third Institute of Oceanography, State Oceanic Administration,China"	SAMN02749527	GCA_000687435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/435/GCA_000687435.1_SOAPdenovo_for_Version_1.05	24903865	20V17
Helicobacter rodentium ATCC 700285	1449345	PRJNA234774	234774	Proteobacteria	delta/epsilon subdivisions	1.81065	37	-	JHWC01	29	1860	1764	4/8/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02743884	GCA_000687535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/535/GCA_000687535.1_ASM68753v1	-	ATCC 700285
[Clostridium] aerotolerans DSM 5434	1410651	PRJNA223500	223500	Terrabacteria group	Firmicutes	4.73237	42.4	-	JHWJ01	50	4333	4179	4/8/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02743875	GCA_000687555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/555/GCA_000687555.1_ASM68755v1	-	DSM 5434
Bifidobacterium boum	78343	PRJNA239840	239840	Terrabacteria group	Actinobacteria	2.17136	59.3	-	JGYQ01	18	1756	1645	8/18/14	4/9/17	Contig	University of Parma	SAMN02673428	GCA_000741535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/535/GCA_000741535.1_Bifbou	"2,508,549,325,107,960"	LMG 10736
Lachnospiraceae bacterium YSB2008	1410633	PRJNA223487	223487	Terrabacteria group	Firmicutes	2.68627	40.7	-	JHWR01	29	2313	2222	4/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743883	GCA_000687655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/655/GCA_000687655.1_ASM68765v1	-	YSB2008
Lachnospiraceae bacterium NC2008	1410627	PRJNA223482	223482	Terrabacteria group	Firmicutes	2.71892	36.8	-	JHWS01	26	2503	2413	4/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743879	GCA_000687675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/675/GCA_000687675.1_ASM68767v1	-	NC2008
Lachnospiraceae bacterium P6B14	1410631	PRJNA223466	223466	Terrabacteria group	Firmicutes	2.6885	45.8	-	JHWZ01	36	2382	2296	4/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743885	GCA_000687695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/695/GCA_000687695.1_ASM68769v1	-	P6B14
Acholeplasma equifetale ATCC 29724	1408415	PRJNA223127	223127	Terrabacteria group	Tenericutes	1.28237	29.6	-	JHXL01	26	1225	1152	4/8/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02743882	GCA_000687735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/735/GCA_000687735.1_ASM68773v1	-	ATCC 29724
Mycoplasma felifaucium ATCC 43428	1408461	PRJNA223084	223084	Terrabacteria group	Tenericutes	0.764934	28.1	-	JHXS01	37	696	621	4/8/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02743891	GCA_000687775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/775/GCA_000687775.1_ASM68777v1	-	ATCC 43428
Mycoplasma testudinis ATCC 43263	1408471	PRJNA223078	223078	Terrabacteria group	Tenericutes	1.32591	31.5	-	JHXT01	38	1126	1040	4/8/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02743887	GCA_000687795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/795/GCA_000687795.1_ASM68779v1	-	ATCC 43263
Mycoplasma elephantis ATCC 51980	1408459	PRJNA223074	223074	Terrabacteria group	Tenericutes	0.769819	25.7	-	JHXU01	25	707	640	4/8/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02743892	GCA_000687815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/815/GCA_000687815.1_ASM68781v1	-	ATCC 51980
Acholeplasma modicum ATCC 29102	1408417	PRJNA223044	223044	Terrabacteria group	Tenericutes	1.21918	27.8	-	JHYB01	10	1160	1102	4/8/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02743893	GCA_000687835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/835/GCA_000687835.1_ASM68783v1	-	ATCC 29102
Mycoplasma glycophilum ATCC 35277	1408463	PRJNA223029	223029	Terrabacteria group	Tenericutes	0.89383	28.5	-	JHYE01	40	702	626	4/8/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02743886	GCA_000687855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/855/GCA_000687855.1_ASM68785v1	-	ATCC 35277
Acidocella facilis ATCC 35904	1408419	PRJNA223023	223023	Proteobacteria	Alphaproteobacteria	3.40393	64.5	-	JHYG01	48	3269	3139	4/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743889	GCA_000687875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/875/GCA_000687875.1_ASM68787v1	-	ATCC 35904
Lachnospiraceae bacterium AC2031	1392493	PRJNA217196	217196	Terrabacteria group	Firmicutes	3.19148	39.5	-	JIAB01	1	2814	2703	4/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743905	GCA_000687975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/975/GCA_000687975.1_ASM68797v1	-	AC2031
Ruminococcaceae bacterium AE2021	1392491	PRJNA217189	217189	Terrabacteria group	Firmicutes	3.08395	46.3	-	JIAE01	1	2885	2814	4/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743907	GCA_000688035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/035/GCA_000688035.1_ASM68803v1	-	AE2021
Solirubrobacterales bacterium URHD0059	1380390	PRJNA213778	213778	Terrabacteria group	Actinobacteria	6.57273	72.4	-	JIAT01	17	6347	6170	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743918	GCA_000688095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/095/GCA_000688095.1_ASM68809v1	-	URHD0059
Terasakiella pusilla DSM 6293	1123355	PRJNA221068	221068	Proteobacteria	Alphaproteobacteria	4.05356	50	-	JHYO01	85	3960	3783	4/8/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02743896	GCA_000688235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/235/GCA_000688235.1_ASM68823v1	-	DSM 6293
Simplicispira psychrophila DSM 11588	1123255	PRJNA221061	221061	Proteobacteria	Betaproteobacteria	3.60077	61.5	-	JHYS01	38	3354	3224	4/8/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02743894	GCA_000688255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/255/GCA_000688255.1_ASM68825v1	-	DSM 11588
Pseudooceanicola nanhaiensis DSM 18065	1122614	PRJNA221015	221015	Proteobacteria	Alphaproteobacteria	4.65973	67.9	-	JHZF01	20	4464	4335	4/8/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02743897	GCA_000688295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/295/GCA_000688295.1_ASM68829v1	-	DSM 18065
Sediminibacter sp. Hel_I_10	1392490	PRJNA217214	217214	FCB group	Bacteroidetes/Chlorobi group	4.10605	37	-	JHZX01	1	3616	3540	4/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743904	GCA_000688335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/335/GCA_000688335.1_ASM68833v1	-	Hel_I_10
Haematomicrobium sanguinis DSM 21259	1121020	PRJNA215662	215662	Terrabacteria group	Actinobacteria	2.92501	61.9	-	JIAG01	27	2717	2603	4/8/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02743916	GCA_000688395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/395/GCA_000688395.1_ASM68839v1	-	DSM 21259
Afifella pfennigii DSM 17143	1120956	PRJNA221002	221002	Proteobacteria	Alphaproteobacteria	3.87259	66.6	-	JHZK01	60	3748	3576	4/8/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02743903	GCA_000688515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/515/GCA_000688515.1_ASM68851v1	-	DSM 17143
Acidobacteria bacterium KBS 146	639030	PRJNA205960	205960	Acidobacteria	Acidobacteriia	5.00104	56.7	-	JHVA01	2	4142	4026	4/8/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02951928	GCA_000688615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/615/GCA_000688615.1_ASM68861v1	-	KBS 146
Lonsdalea quercina subsp. quercina	1082705	PRJNA242885	242885	Proteobacteria	Gammaproteobacteria	3.85007	55.1	-	JIBO01	37	3428	3235	5/9/14	4/9/17	Contig	Colorado State University	SAMN02712570	GCA_000688655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/655/GCA_000688655.1_LonsB104	24926062	ATCC 29281
Cardinium endosymbiont cBtQ1 of Bemisia tabaci	1354314	PRJEB4234	244457	FCB group	Bacteroidetes/Chlorobi group	1.01259	36.1	-	CBQZ01	11	909	750	4/12/14	4/17/17	Contig	ICBIBE	SAMEA3139007	GCA_000689375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/375/GCA_000689375.1_CHV_1	24723729	cBtQ1
Candidatus Phaeomarinobacter ectocarpi	1458461	PRJEB6075	244304	Proteobacteria	Alphaproteobacteria	3.4159	58.9	chromosome I:NZ_HG966617.1/HG966617.1	-	1	3289	3226	4/9/14	4/9/17	Chromosome	STATION BIOLOGIQUE DE ROSCOFF	SAMEA3139008	GCA_000689395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/395/GCA_000689395.1_Ectocarpus_siliculous_Es32_genome_assembly_V1	25120558	Ec32
Paraburkholderia caribensis	75105	PRJNA304192	304192	Proteobacteria	Betaproteobacteria	9.31999	62.3061	chromosome 1:NZ_CP013347.1/CP013347.1; chromosome 2:NZ_CP013348.1/CP013348.1; chromosome 3:NZ_CP013349.1/CP013349.1	-	3	8361	8024	4/5/16	4/12/17	Complete Genome	Tohoku university	SAMN04296707	GCA_001611015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/015/GCA_001611015.1_ASM161101v1	-	Bcrs1W
Nitrincola lacisaponensis	267850	PRJNA242584	242584	Proteobacteria	Gammaproteobacteria	3.41213	52.1	-	JMSZ01	43	3144	3055	5/15/14	4/17/17	Contig	Institute of Microbial Technology	SAMN02700551	GCA_000691225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/225/GCA_000691225.1_NitLas1.0	16280482	4CA
Mycoplasma hyosynoviae	29559	PRJNA238379	238379	Terrabacteria group	Tenericutes	0.848102	27.1	-	JFKG01	48	686	619	5/15/14	4/2/17	Contig	"Newport Laboratories, A Sanofi Company"	SAMN02674506	GCA_000691385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/385/GCA_000691385.1_MhyoNPL7v1.0_of_Mycoplasma_hyosynoviae_strain_NPL7_genome	24903877	NPL7
Bifidobacterium ruminantium DSM 6489	1410647	PRJNA223488	223488	Terrabacteria group	Actinobacteria	2.21856	59.2	-	JHWQ01	43	1872	1723	4/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743880	GCA_000687635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/635/GCA_000687635.1_ASM68763v1	-	DSM 6489
Wolbachia endosymbiont of Glossina morsitans morsitans	1150948	PRJNA218057	218057	Proteobacteria	Alphaproteobacteria	1.01951	35.3	-	AWUH01	201	1076	727	5/9/14	4/9/17	Scaffold	University of Patras	SAMN02768711	GCA_000689175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/175/GCA_000689175.1_wGmm_version4	24763283	-
Mycobacterium triplex	47839	PRJEB5744	240186	Terrabacteria group	Actinobacteria	6.38284	66.6	-	CCAU01	4	6016	5812	3/19/14	4/17/17	Scaffold	URMITE	SAMEA3139001	GCA_000689255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/255/GCA_000689255.1_BN973_1	24874681	DSM 44626
Halostagnicola sp. A56	1495067	PRJNA245787	245787	Euryarchaeota	Halobacteria	3.17849	60.8	-	JMIP02	26	3288	2843	5/15/14	4/10/17	Contig	Agharkar Research Institute	SAMN02739884	GCA_000691505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/505/GCA_000691505.2_ASM69150v2	-	A56
Weissella oryzae SG25	1329250	PRJDB1101	246053	Terrabacteria group	Firmicutes	2.12948	38.9	-	BAWR01	70	2179	2072	5/1/14	4/12/17	Scaffold	"National Agriculture and Food Research Organization, National Institute of Livestock and Grassland Science"	SAMD00000341	GCA_000691805.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/805/GCA_000691805.2_ASM69180v2	25013139	SG25
[Oscillatoria] sp. PCC 6506	272129	PRJEA49445	49445	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.67671	43.4	-	CACA01	377	5626	5304	7/5/10	5/19/17	Contig	"ENSCP, Biochemistry, Paris, France"	SAMEA2272769	GCA_000180455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/180/455/GCA_000180455.1_ASM18045v1	20675499	PCC 6506
Gemmatimonas sp. SG8_23	1703356	PRJNA270657	270657	FCB group	Gemmatimonadetes	3.20954	68.2	-	LJNO01	310	3027	2634	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994165	GCA_001303085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/085/GCA_001303085.1_ASM130308v1	25922666	-
Amycolatopsis rifamycinica	287986	PRJNA244719	244719	Terrabacteria group	Actinobacteria	9.20242	71.8	-	JMQI01	88	8613	8268	5/22/14	4/17/17	Contig	University of Delhi	SAMN02745639	GCA_000695625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/625/GCA_000695625.1_ASM69562v1	24994803	DSM 46095
Xanthomonas fragariae	48664	PRJEB20807	387714	Proteobacteria	Gammaproteobacteria	4.26816	62.3035	chromosome 1:NZ_LT853880.1/LT853880.1; plasmid pNBC2815-21:NZ_LT853881.1/LT853881.1	-	2	3974	3238	5/24/17	7/12/17	Complete Genome	JLU	SAMEA104068690	GCA_900183985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/985/GCA_900183985.1_NBC2815.1	-	NBC2815
Vibrio fortis	212667	PRJNA238974	238974	Proteobacteria	Gammaproteobacteria	5.28601	44.9	-	JFFR01	33	4768	4619	5/23/14	4/17/17	Scaffold	Dalian Ocean University	SAMN02666092	GCA_000695685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/685/GCA_000695685.1_Soap_denovo_2.01	24994792	Dalian14
Laribacter hongkongensis	168471	PRJNA389628	389628	Proteobacteria	Betaproteobacteria	3.42427	62.3	chromosome:NZ_CP022115.1/CP022115.1	-	1	3331	3164	7/5/17	7/12/17	Complete Genome	The First Affiliated Hospital of Guangzhou Medical University	SAMN07204264	GCA_002215055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/055/GCA_002215055.1_ASM221505v1	-	HLGZ1
Streptomyces olindensis	358823	PRJNA242835	242835	Terrabacteria group	Actinobacteria	9.38185	71.6	-	JJOH01	120	8526	7980	5/27/14	3/9/17	Contig	TU Kaiserslautern	SAMN02726841	GCA_000696115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/115/GCA_000696115.1_SoWt_assembly	24970824	DAUFPE 5622
Pseudomonas putida S13.1.2	1384061	PRJNA214610	214610	Proteobacteria	Gammaproteobacteria	6.62185	62.3	chromosome:NZ_CP010979.1/CP010979.1	-	1	5993	5760	3/4/15	4/3/17	Complete Genome	UNIVERSITY OF MALAYA	SAMN02639951	GCA_000498395.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/395/GCA_000498395.3_ASM49839v3	-	S13.1.2
Geobacter pickeringii	345632	PRJNA263119	263119	Proteobacteria	delta/epsilon subdivisions	3.6187	62.3	chromosome:NZ_CP009788.1/CP009788.1	-	1	3328	3190	1/14/15	4/17/17	Complete Genome	University of Minnesota	SAMN03096815	GCA_000817955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/955/GCA_000817955.1_ASM81795v1	25744992	G13
Comamonadaceae bacterium H1	1458427	PRJDB1609	248037	Proteobacteria	Betaproteobacteria	2.49225	66.2	-	BAWN01	94	2333	2223	5/17/14	4/10/17	Scaffold	J. Craig Venter Institute	SAMD00000327	GCA_000696225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/225/GCA_000696225.1_ASM69622v1	24845058	H1
Hydrogenovibrio marinus DSM 11271	1123513	PRJNA217204	217204	Proteobacteria	Gammaproteobacteria	2.6093	43.9	-	JOML01	3	2529	2429	6/24/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02746014	GCA_000711315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/315/GCA_000711315.1_ASM71131v1	-	DSM 11271
Pseudomonas pseudoalcaligenes	330	PRJEB5292	243041	Proteobacteria	Gammaproteobacteria	4.69698	62.3	chromosome I:NZ_LK391695.1/LK391695.1	-	1	4521	4134	6/11/14	4/10/17	Complete Genome	CEBITEC	SAMEA2536150	GCA_000953455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/455/GCA_000953455.1_Ppseudo_Pac	-	-
Oribacterium asaccharolyticum ACB7	796944	PRJNA49879	49879	Terrabacteria group	Firmicutes	2.52058	43.3	-	AFZD01	9	2279	2149	12/14/11	4/7/17	Scaffold	Broad Institute	SAMN02463873	GCA_000238075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/075/GCA_000238075.1_Oribacterium_sp_ACB7_V1	-	ACB7
Oribacterium parvum ACB1	796943	PRJNA49877	49877	Terrabacteria group	Firmicutes	2.47086	42.2	-	AFZC02	2	2211	2102	12/14/11	4/8/17	Scaffold	Broad Institute	SAMN02463872	GCA_000238055.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/055/GCA_000238055.2_Oribacterium_sp_ACB1_V2	-	ACB1
Pseudomonas pseudoalcaligenes CECT 5344	1182590	PRJEB27	171526	Proteobacteria	Gammaproteobacteria	4.68634	62.3	chromosome I:NZ_HG916826.1/HG916826.1	-	1	4514	4115	2/4/14	4/10/17	Complete Genome	"CeBiTec, Bielefeld University"	SAMEA4532340	GCA_000297075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/075/GCA_000297075.2_Ppseudo_final	-	CECT5344
Geomicrobium sp. JCM 19037	1460634	PRJDB1612	243813	Terrabacteria group	Firmicutes	4.09356	44.3	-	BAWZ01	75	4553	3501	5/21/14	4/9/17	Contig	"Microbe Division/JCM, RIKEN BioResource Center"	SAMD00000374	GCA_000698105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/105/GCA_000698105.1_ASM69810v1	24948772	JCM 19037
Peptoclostridium sp. UBA4559	1947070	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.67417	30.4	-	DGKX01	43	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457836	GCA_002387145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/145/GCA_002387145.1_ASM238714v1	28894102	-
Pseudomonas simiae	321846	PRJNA245780	245780	Proteobacteria	Gammaproteobacteria	6.16907	60.3	chromosome:NZ_CP007637.1/CP007637.1	-	1	5701	5545	6/5/14	4/9/17	Chromosome	"Utrecht University, Utrecht, NETHERLANDS"	SAMN02739889	GCA_000698265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/265/GCA_000698265.1_ASM69826v1	-	WCS417
Streptomyces wadayamensis	141454	PRJNA241453	241453	Terrabacteria group	Actinobacteria	7.05601	73.4	-	JHDU01	176	6168	5507	6/6/14	4/11/17	Scaffold	University of Campinas	SAMN02692260	GCA_000698945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/945/GCA_000698945.1_LGO_A23_AS7	24994795	A23
Caballeronia grimmiae	1071679	PRJNA238424	238424	Proteobacteria	Betaproteobacteria	6.7043	63	-	JFHE01	160	6258	5955	6/5/14	4/9/17	Contig	Laboratory of Biocatalysis and Synthetic Biotechnology	SAMN02671719	GCA_000698555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/555/GCA_000698555.1_SOAPdenovo_v1.05	24981326	R27
Caballeronia zhejiangensis	871203	PRJNA238427	238427	Proteobacteria	Betaproteobacteria	7.76722	62.7	-	JFHD01	116	7343	7030	6/5/14	4/9/17	Contig	Laboratory of Biocatalysis and Synthetic Biotechnology	SAMN02671701	GCA_000698575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/575/GCA_000698575.1_SOAPdenovo_v1.05	24981326	OP-1
Aeromonas taiwanensis	633417	PRJDB1639	248438	Proteobacteria	Gammaproteobacteria	4.23059	62.8	-	BAWK01	104	3943	3625	5/23/14	4/9/17	Contig	National Health Research Institutes	SAMD00000007	GCA_000699185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/185/GCA_000699185.1_ASM69918v1	24926060	LMG 24683
Pseudomonas putida NBRC 14164	1211579	PRJDB191	171050	Proteobacteria	Gammaproteobacteria	6.1567	62.3	chromosome:NC_021505.1/AP013070.1	-	1	5610	5407	6/15/13	4/1/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00061028	GCA_000412675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/675/GCA_000412675.1_ASM41267v1	24526630	NBRC 14164
Peptoclostridium litorale DSM 5388	1121324	PRJNA240953	240953	Terrabacteria group	Firmicutes	3.40463	41.3	-	JJMM01	26	3151	3008	6/9/14	4/9/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02688025	GCA_000699585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/585/GCA_000699585.1_CLIT1	25081264	W6
Streptomyces fradiae	1906	PRJNA244372	244372	Terrabacteria group	Actinobacteria	7.67037	72.8	-	JNAD01	171	6551	6109	6/10/14	3/9/17	Contig	Vavilov Institute of General Genetics	SAMN02777962	GCA_000700005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/005/GCA_000700005.1_ASM70000v1	25477406	ATCC 19609
Mycoplasma sturni DSM 22021	1122249	PRJNA221020	221020	Terrabacteria group	Tenericutes	0.813344	29	-	JNIZ01	4	654	607	6/11/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02841182	GCA_000701485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/485/GCA_000701485.1_ASM70148v1	-	DSM 22021
Dyadobacter crusticola DSM 16708	1121483	PRJNA221040	221040	FCB group	Bacteroidetes/Chlorobi group	6.17342	46.7	-	JNJB01	40	5319	5176	6/11/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02841160	GCA_000701505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/505/GCA_000701505.1_ASM70150v1	-	DSM 16708
Mesoplasma grammopterae ATCC 49580	1408447	PRJNA223004	223004	Terrabacteria group	Tenericutes	0.806944	26.9	-	JNJC01	8	741	688	6/11/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02841185	GCA_000701525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/525/GCA_000701525.1_ASM70152v1	-	ATCC 49580
Lachnospiraceae bacterium AC2014	1408320	PRJNA223008	223008	Terrabacteria group	Firmicutes	2.76012	43.5	-	JNJE01	14	2525	2425	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841165	GCA_000701545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/545/GCA_000701545.1_ASM70154v1	-	AC2014
Acidiphilium angustum ATCC 35903	1408418	PRJNA223034	223034	Proteobacteria	Alphaproteobacteria	4.17541	63.6	-	JNJH01	206	3946	3731	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841149	GCA_000701585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/585/GCA_000701585.1_ASM70158v1	-	ATCC 35903
Lachnospiraceae bacterium MC2017	1408324	PRJNA223042	223042	Terrabacteria group	Firmicutes	4.25553	41.4	-	JNJK01	56	3762	3584	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841162	GCA_000701625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/625/GCA_000701625.1_ASM70162v1	-	MC2017
Butyricicoccus desmolans ATCC 43058	1408437	PRJNA223055	223055	Terrabacteria group	Firmicutes	2.6469	54.1	-	JNJN01	95	2725	2540	6/11/14	3/3/17	Scaffold	DOE Joint Genome Institute	SAMN02841159	GCA_000701665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/665/GCA_000701665.1_ASM70166v1	-	ATCC 43058
Erysipelotrichaceae bacterium NK3D112	877415	PRJNA223066	223066	Terrabacteria group	Firmicutes	3.14894	48.4	-	JNJQ01	95	2927	2790	6/11/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02841154	GCA_000701725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/725/GCA_000701725.1_ASM70172v1	-	NK3D112
Mycoplasma alvi ATCC 29626	1408453	PRJNA223077	223077	Terrabacteria group	Tenericutes	0.84064	25	-	JNJU01	7	730	677	6/11/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02841214	GCA_000701785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/785/GCA_000701785.1_ASM70178v1	-	ATCC 29626
Mycoplasma iners ATCC 19705	1408464	PRJNA223089	223089	Terrabacteria group	Tenericutes	0.767866	28.3	-	JNJW01	28	645	580	6/11/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02841176	GCA_000701805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/805/GCA_000701805.1_ASM70180v1	-	ATCC 19705
Mycoplasma collis ATCC 35278	1408456	PRJNA223097	223097	Terrabacteria group	Tenericutes	0.902877	22.4	-	JNJY01	43	823	749	6/11/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02841177	GCA_000701825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/825/GCA_000701825.1_ASM70182v1	-	ATCC 35278
Mycoplasma columborale ATCC 29258	1408458	PRJNA223098	223098	Terrabacteria group	Tenericutes	0.910711	29.2	-	JNJZ01	29	769	697	6/11/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02841178	GCA_000701845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/845/GCA_000701845.1_ASM70184v1	-	ATCC 29258
Mycoplasma felis ATCC 23391	1408462	PRJNA223099	223099	Terrabacteria group	Tenericutes	0.811556	24.3	-	JNKA01	44	735	660	6/11/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02841218	GCA_000701865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/865/GCA_000701865.1_ASM70186v1	-	ATCC 23391
Proteiniclasticum ruminis DSM 24773	1410668	PRJNA223441	223441	Terrabacteria group	Firmicutes	3.1183	43.1	-	JNKC01	21	2941	2829	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841179	GCA_000701905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/905/GCA_000701905.1_ASM70190v1	-	DSM 24773
Legionella wadsworthii DSM 21896 = ATCC 33877	1122170	PRJNA234416	234416	Proteobacteria	Gammaproteobacteria	3.58023	38	-	JNIA01	16	3194	3082	6/11/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02744130	GCA_000701265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/265/GCA_000701265.1_ASM70126v1	-	ATCC 33877
Deinococcus marmoris DSM 12784	1121381	PRJNA220990	220990	Terrabacteria group	Deinococcus-Thermus	4.80002	64.4	-	JNIV01	252	4612	4297	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841164	GCA_000701405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/405/GCA_000701405.1_ASM70140v1	-	DSM 12784
Deinococcus frigens DSM 12807	1121380	PRJNA220993	220993	Terrabacteria group	Deinococcus-Thermus	4.03178	65.4	-	JNIW01	149	3980	3700	6/11/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02841173	GCA_000701425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/425/GCA_000701425.1_ASM70142v1	-	DSM 12807
Brevundimonas bacteroides DSM 4726	1121124	PRJNA221004	221004	Proteobacteria	Alphaproteobacteria	3.22054	68.2	-	JNIX01	15	3212	3130	6/11/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02841166	GCA_000701445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/445/GCA_000701445.1_ASM70144v1	-	DSM 4726
Paraoerskovia marina DSM 21750	1122933	PRJNA221014	221014	Terrabacteria group	Actinobacteria	2.94832	70.8	-	JNIY01	11	2686	2578	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841152	GCA_000701465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/465/GCA_000701465.1_ASM70146v1	-	DSM 21750
Ruminobacter sp. RM87	1200567	PRJNA223443	223443	Proteobacteria	Gammaproteobacteria	2.86167	42.4	-	JNKD01	123	2444	2259	6/11/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02841219	GCA_000701925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/925/GCA_000701925.1_ASM70192v1	-	RM87
Succinivibrio dextrinosolvens DSM 3072	1123324	PRJEB19576	376359	Proteobacteria	Gammaproteobacteria	2.66678	39	-	FUXX01	104	2397	2247	3/4/17	3/11/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02745213	GCA_900167015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/015/GCA_900167015.1_IMG-taxon_2585428075_annotated_assembly	-	DSM 3072
Lachnospiraceae bacterium P6A3	1410630	PRJNA223470	223470	Terrabacteria group	Firmicutes	2.97854	44.2	-	JNKP01	9	2711	2645	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841223	GCA_000702085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/085/GCA_000702085.1_ASM70208v1	-	P6A3
Lachnospiraceae bacterium ND2006	1410628	PRJNA223475	223475	Terrabacteria group	Firmicutes	3.94539	39.3	-	JNKS01	103	3586	3394	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841224	GCA_000702125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/125/GCA_000702125.1_ASM70212v1	-	ND2006
Lachnospiraceae bacterium FD2005	1410623	PRJNA223476	223476	Terrabacteria group	Firmicutes	2.44071	41.2	-	JNKT01	9	2263	2181	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841196	GCA_000702145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/145/GCA_000702145.1_ASM70214v1	-	FD2005
Sharpea azabuensis DSM 18934	1410674	PRJNA223483	223483	Terrabacteria group	Firmicutes	2.41178	37.1	-	JNKU01	91	2475	2293	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841194	GCA_000702165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/165/GCA_000702165.1_ASM70216v1	-	DSM 18934
Lachnospiraceae bacterium C6A11	1410622	PRJNA223496	223496	Terrabacteria group	Firmicutes	2.89507	44	-	JNKY01	17	2379	2291	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841226	GCA_000702245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/245/GCA_000702245.1_ASM70224v1	-	C6A11
Pseudomonas putida S16	1042876	PRJNA67881	67881	Proteobacteria	Gammaproteobacteria	5.98479	62.3	chromosome:NC_015733.1/CP002870.1	-	1	5585	5301	6/30/11	5/19/17	Complete Genome	Shanghai Jiao Tong University	SAMN02603862	GCA_000219705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/705/GCA_000219705.1_ASM21970v1	21914868	S16
Bryobacter aggregatus MPL3	1340493	PRJNA205962	205962	Acidobacteria	Solibacteres	5.74799	57.9	-	JNIF01	4	5071	4952	6/11/14	3/29/17	Contig	DOE Joint Genome Institute	SAMN02841143	GCA_000702445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/445/GCA_000702445.1_ASM70244v1	-	MPL3
Geodermatophilaceae bacterium URHB0048	1380347	PRJNA213784	213784	Terrabacteria group	Actinobacteria	4.70588	72.3	-	JNII01	13	4543	4413	6/11/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02841141	GCA_000702465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/465/GCA_000702465.1_ASM70246v1	-	URHB0048
Alicyclobacillus macrosporangiidus CPP55	1382304	PRJNA214299	214299	Terrabacteria group	Firmicutes	4.09165	62.3	-	JNIL01	2	4001	3821	6/11/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02841142	GCA_000702485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/485/GCA_000702485.1_ASM70248v1	-	CPP55
Lachnospiraceae bacterium AC2012	1392494	PRJNA217193	217193	Terrabacteria group	Firmicutes	2.55544	41.3	-	JNIN01	2	2353	2238	6/11/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02841168	GCA_000702525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/525/GCA_000702525.1_ASM70252v1	-	AC2012
Exiguobacterium aurantiacum DSM 6208	1397694	PRJNA218043	218043	Terrabacteria group	Firmicutes	3.0376	52.8	-	JNIQ01	2	3123	2967	6/11/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02841171	GCA_000702585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/585/GCA_000702585.1_ASM70258v1	25323723	DSM 6208
Exiguobacterium oxidotolerans	223958	PRJNA314532	314532	Terrabacteria group	Firmicutes	3.64421	46.785	chromosome:NZ_CP022236.1/CP022236.1; plasmid unnamed1:NZ_CP022237.1/CP022237.1; plasmid unnamed2:NZ_CP022238.1/CP022238.1; plasmid unnamed3:NZ_CP022239.1/CP022239.1; plasmid unnamed4:NZ_CP022240.1/CP022240.1; plasmid unnamed5:NZ_CP022241.1/CP022241.1	-	6	3814	3649	7/3/17	7/5/17	Chromosome	Exiguobacterium oxidotolerans strain N4-1P	SAMN04537352	GCA_002214325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/325/GCA_002214325.1_ASM221432v1	-	N4-1P
Desulfovibrio alcoholivorans DSM 5433	1121438	PRJNA221039	221039	Proteobacteria	delta/epsilon subdivisions	5.12891	64.7	-	JNJA01	65	4566	4386	6/11/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02841169	GCA_000702665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/665/GCA_000702665.1_ASM70266v1	-	DSM 5433
Lachnospiraceae bacterium AC2028	1408321	PRJNA223007	223007	Terrabacteria group	Firmicutes	2.77236	46.2	-	JNJD01	14	2539	2452	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841155	GCA_000702685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/685/GCA_000702685.1_ASM70268v1	-	AC2028
Mycoplasma simbae ATCC 49888	1408469	PRJNA223019	223019	Terrabacteria group	Tenericutes	0.852572	31.8	-	JNJG01	12	713	661	6/11/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02841157	GCA_000702705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/705/GCA_000702705.1_ASM70270v1	-	ATCC 49888
Mesoplasma photuris ATCC 49581	1408448	PRJNA223039	223039	Terrabacteria group	Tenericutes	0.778966	28.1	-	JNJI01	10	727	687	6/11/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02841188	GCA_000702725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/725/GCA_000702725.1_ASM70272v1	-	ATCC 49581
Mycoplasma cloacale ATCC 35276	1408455	PRJNA223043	223043	Terrabacteria group	Tenericutes	0.661755	27	-	JNJL01	16	593	540	6/11/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02841208	GCA_000702745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/745/GCA_000702745.1_ASM70274v1	-	ATCC 35276
Acholeplasma hippikon ATCC 29725	1408416	PRJNA223075	223075	Terrabacteria group	Tenericutes	1.43045	30.9	-	JNJT01	17	1390	1329	6/11/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02841174	GCA_000702765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/765/GCA_000702765.1_ASM70276v1	-	ATCC 29725
Mycoplasma primatum ATCC 25948	1408468	PRJNA223080	223080	Terrabacteria group	Tenericutes	0.902769	27.6	-	JNJV01	63	811	718	6/11/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02841175	GCA_000702785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/785/GCA_000702785.1_ASM70278v1	-	ATCC 25948
Mycoplasma anseris ATCC 49234	1408454	PRJNA223095	223095	Terrabacteria group	Tenericutes	0.739184	26.3	-	JNJX01	23	662	603	6/11/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02841217	GCA_000702805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/805/GCA_000702805.1_ASM70280v1	-	ATCC 49234
Lachnospiraceae bacterium FE2018	1410624	PRJNA223461	223461	Terrabacteria group	Firmicutes	3.21364	48.7	-	JNKK01	119	2891	2726	6/11/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02841190	GCA_000702845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/845/GCA_000702845.1_ASM70284v1	-	FE2018
Mitsuokella jalaludinii DSM 13811	1410665	PRJNA223472	223472	Terrabacteria group	Firmicutes	2.41256	58.1	-	JNKR01	66	2275	2098	6/11/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02841192	GCA_000702905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/905/GCA_000702905.1_ASM70290v1	-	DSM 13811
Lachnospiraceae bacterium AC2029	1458462	PRJNA237258	237258	Terrabacteria group	Firmicutes	3.85973	49.9	-	JNLK01	1	3123	3002	6/11/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02841230	GCA_000703065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/065/GCA_000703065.1_ASM70306v1	-	AC2029
Clostridium algidicarnis	37659	PRJNA239120	239120	Terrabacteria group	Firmicutes	3.06029	30.3	-	JNLN01	1	2848	2687	6/11/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02841231	GCA_000703125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/125/GCA_000703125.1_ASM70312v1	-	B3
Komagataeibacter rhaeticus AF1	1432055	PRJNA230383	230383	Proteobacteria	Alphaproteobacteria	3.93914	62.5	-	JDTI01	213	3789	3355	6/11/14	4/17/17	Scaffold	Laboratorio Nacional de Ciencia e Tecnologia do Bioetanol	SAMN02615723	GCA_000700985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/985/GCA_000700985.1_GLUCORHAEAF1_v1	25059874	AF1
Mangrovibacter sp. MFB070	1224318	PRJNA243634	243634	Proteobacteria	Gammaproteobacteria	5.36158	50.4	-	JJMI01	57	5059	4831	6/12/14	4/17/17	Scaffold	"Central Institute of Fisheries Technology, Cochin"	SAMN02719562	GCA_000705335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/335/GCA_000705335.1_Mangrovibacter1.0	25414507	MFB070
Marinobacterium sp. AK27	1232683	PRJNA243838	243838	Proteobacteria	Gammaproteobacteria	4.55288	56.4	-	JMQN01	63	4228	4107	6/12/14	4/9/17	Contig	Institute of Microbial Technology	SAMN02745957	GCA_000705555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/555/GCA_000705555.1_MarKoc1.0	-	AK27
Parvibaculum lavamentivorans DS-1	402881	PRJNA17639	17639	Proteobacteria	Alphaproteobacteria	3.91474	62.3	chromosome:NC_009719.1/CP000774.1	-	1	3723	3647	7/30/07	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00623055	GCA_000017565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/565/GCA_000017565.1_ASM1756v1	"107,883,591,257,101,000,000,000"	DS-1
Persephonella sp. IF05-L8	1158338	PRJNA237257	237257	Aquificae	Aquificae	1.82886	34.6	-	JNLJ01	5	1938	1876	6/11/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02841204	GCA_000703045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/045/GCA_000703045.1_ASM70304v1	-	IFO5_L8
Salinivibrio socompensis S35	1308978	PRJNA194040	194040	Proteobacteria	Gammaproteobacteria	3.40651	49.5	-	AQOD01	270	3354	2299	1/7/14	4/9/17	Contig	Universidade Federal do Rio de Janeiro	SAMN02597455	GCA_000513715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/715/GCA_000513715.1_saliniS351.0	-	S35
Ensifer adhaerens	106592	PRJNA247817	247817	Proteobacteria	Alphaproteobacteria	7.2675	62.298	chromosome:NZ_CP015880.1/CP015880.1; plasmid pCasidaAA:NZ_CP015881.1/CP015881.1; plasmid pCasidaAB:NZ_CP015882.1/CP015882.1	-	3	6909	6641	6/16/16	4/12/17	Complete Genome	University of Arizona	SAMN02781308	GCA_000697965.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/697/965/GCA_000697965.2_ASM69796v2	-	Casida A
Aeromonas jandaei Riv2	1458276	PRJNA237126	237126	Proteobacteria	Gammaproteobacteria	4.47809	59	-	JFDL01	43	4086	3996	6/16/14	4/9/17	Contig	USFDA	SAMN02597482	GCA_000708125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/125/GCA_000708125.1_RIV2	-	Riv2
Virgibacillus alimentarius	698769	PRJNA238855	238855	Terrabacteria group	Firmicutes	3.04586	37.1	-	JFBD01	146	3071	2841	6/16/14	4/17/17	Contig	Kyung Hee University	SAMN02647401	GCA_000709085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/085/GCA_000709085.1_Virgibacillus_alimentarius_J18	-	J18T
Polaromonas glacialis	866564	PRJNA244948	244948	Proteobacteria	Betaproteobacteria	5.28404	62.2	-	JMDZ01	27	4984	4731	6/17/14	4/17/17	Scaffold	China Center for Type Culture Collection	SAMN02730072	GCA_000709345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/345/GCA_000709345.1_Polaromonas_sp.	-	R3-9
Rhodococcus erythropolis PR4	234621	PRJDA20395	20395	Terrabacteria group	Actinobacteria	6.89554	62.2948	chromosome:NC_012490.1/AP008957.1; plasmid pREC1:NC_007486.1/AP008932.1; plasmid pREC2:NC_007487.1/AP008933.1; plasmid pREL1:NC_007491.1/AP008931.1	-	4	6491	6321	4/1/09	5/28/17	Complete Genome	NITE	SAMD00060932	GCA_000010105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/105/GCA_000010105.1_ASM1010v1	16423019	PR4 (= NBRC 100887)
Streptomyces griseorubens	66897	PRJNA243545	243545	Terrabacteria group	Actinobacteria	7.66863	72.2	-	JJMG01	2	6952	6396	6/18/14	3/9/17	Scaffold	Shanghai JiaoTong University	SAMN02715572	GCA_000709915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/915/GCA_000709915.1_JSD	24994798	JSD-1
Kitasatospora sp. Root107	1736424	PRJNA297942	297942	Terrabacteria group	Actinobacteria	8.16804	71.4	-	LMCT01	73	7394	6898	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155693	GCA_001424875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/875/GCA_001424875.1_Root107	26633631	Root107
Haladaptatus cibarius D43	1455608	PRJNA236630	236630	Euryarchaeota	Halobacteria	3.92672	57.8	-	JDTH01	13	3994	3843	6/20/14	4/17/17	Contig	Korea Basic Science Institute	SAMN02629026	GCA_000710615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/615/GCA_000710615.1_HAPD43.1	26380039	D43
Haloterrigena jeotgali A29	1455609	PRJNA236631	236631	Euryarchaeota	Halobacteria	4.13162	64.9	-	JDTG01	20	4184	4045	6/20/14	4/17/17	Contig	Korea Basic Science Institute	SAMN02629025	GCA_000710605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/605/GCA_000710605.1_HTGA29.1	-	A29
alpha proteobacterium Q-1	1492281	PRJDB1742	252681	Proteobacteria	Alphaproteobacteria	3.08573	56.1	-	BAYV01	109	2812	2713	6/12/14	4/9/17	Contig	Chiba University	SAMD00000398	GCA_000710935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/935/GCA_000710935.1_ASM71093v1	"2,244,760,124,994,800"	Q-1
Thiomicrospira pelophila DSM 1534	1123517	PRJNA214438	214438	Proteobacteria	Gammaproteobacteria	2.10821	44.5	-	JOMR01	1	2031	1968	6/24/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02745861	GCA_000711195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/195/GCA_000711195.1_ASM71119v1	-	DSM 1534
Pelobacter seleniigenes DSM 18267	1122946	PRJNA215343	215343	Proteobacteria	delta/epsilon subdivisions	5.08837	54.2	-	JOMG01	6	4520	4416	6/24/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02744830	GCA_000711225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/225/GCA_000711225.1_ASM71122v1	-	DSM 18267
Methanomicrobium mobile BP	694440	PRJNA223456	223456	Euryarchaeota	Methanomicrobia	1.71179	49.5	-	JOMF01	12	1686	1617	6/24/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02745537	GCA_000711215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/215/GCA_000711215.1_ASM71121v1	-	BP
Polycyclovorans algicola TG408	1415779	PRJNA225849	225849	Proteobacteria	Gammaproteobacteria	3.65321	63.8	-	JOMH01	1	3433	3321	6/24/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02744757	GCA_000711245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/245/GCA_000711245.1_ASM71124v1	25814607	TG408
Desulfovibrio frigidus DSM 17176	1121447	PRJNA234954	234954	Proteobacteria	delta/epsilon subdivisions	4.18504	42.8	-	JONL01	24	3738	3637	6/24/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02745701	GCA_000711735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/735/GCA_000711735.1_ASM71173v1	-	DSM 17176
Roseomonas aerilata DSM 19363	1123060	PRJNA235120	235120	Proteobacteria	Alphaproteobacteria	6.42847	69.7	-	JONP01	151	5993	5624	6/24/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02745777	GCA_000711725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/725/GCA_000711725.1_ASM71172v1	-	DSM 19363
Sphingomonas astaxanthinifaciens DSM 22298	1123267	PRJNA234792	234792	Proteobacteria	Alphaproteobacteria	2.53303	68.4	-	JONN01	3	2532	2464	6/24/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02691714	GCA_000711715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/715/GCA_000711715.1_ASM71171v1	-	DSM 22298
Vibrio rhizosphaerae DSM 18581	1123497	PRJNA234834	234834	Proteobacteria	Gammaproteobacteria	4.4631	46.3	-	JONG01	47	3901	3758	6/24/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02745802	GCA_000711805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/805/GCA_000711805.1_ASM71180v1	-	DSM 18581
[Clostridium] aminophilum DSM 10710	1121296	PRJNA234874	234874	Terrabacteria group	Firmicutes	3.11442	50.7	-	JONJ01	36	2699	2568	6/24/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02745353	GCA_000711825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/825/GCA_000711825.1_ASM71182v1	-	DSM 10710
Pedobacter borealis DSM 19626	1454007	PRJNA236461	236461	FCB group	Bacteroidetes/Chlorobi group	5.54492	38.4	-	JAUG01	216	4728	4500	6/16/14	4/16/17	Contig	GCAT-SEEK	SAMN02597035	GCA_000708285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/285/GCA_000708285.2_Genome_Assembly_for_Pedobacter_borealis_DSM19626	-	DSM 19626
Chryseobacterium hispalense DSM 25574	491205	PRJNA236202	236202	FCB group	Bacteroidetes/Chlorobi group	4.36376	36.7	-	JARQ01	27	3966	3847	6/16/14	4/11/17	Contig	Lycoming College	SAMN02595408	GCA_000708615.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/615/GCA_000708615.2_Chryseo_hispalense_genome	-	DSM 25574
Carnobacterium jeotgali MS3	1449340	PRJNA235041	235041	Terrabacteria group	Firmicutes	2.51824	35.4	-	JQNF01	12	2460	2305	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02745563	GCA_000745125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/125/GCA_000745125.1_ASM74512v1	-	MS3
Sinorhizobium americanum	194963	PRJNA298565	298565	Proteobacteria	Alphaproteobacteria	6.75151	62.2856	chromosome:NZ_CP013107.1/CP013107.1; plasmid A:NZ_CP013108.1/CP013108.1; plasmid B:NZ_CP013109.1/CP013109.1; plasmid C:NZ_CP013110.1/CP013110.1	-	4	6358	5995	12/5/16	4/16/17	Complete Genome	"Centro de Ciencias Genomicas, UNAM"	SAMN04160749	GCA_001889105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/105/GCA_001889105.1_ASM188910v1	-	CFNEI 73
Martelella sp. AD-3	686597	PRJNA310308	310308	Proteobacteria	Alphaproteobacteria	5.03601	62.2813	chromosome:NZ_CP014275.1/CP014275.1; plasmid unnamed1:NZ_CP014276.1/CP014276.1; plasmid unnamed2:NZ_CP014277.1/CP014277.1	-	3	4691	4537	3/1/16	4/12/17	Complete Genome	East China University of Science and Technology	SAMN04450245	GCA_001578105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/105/GCA_001578105.1_ASM157810v1	-	AD-3
Microbulbifer sp. HZ11	1453501	PRJNA236345	236345	Proteobacteria	Gammaproteobacteria	4.22255	56.7	-	JELR01	8	3507	3427	6/16/14	4/9/17	Contig	ZheJiang University	SAMN02641169	GCA_000708675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/675/GCA_000708675.1_unknown	-	HZ11
Andreprevotia chitinilytica DSM 18519	1120999	PRJNA234919	234919	Proteobacteria	Betaproteobacteria	5.14901	59.9	-	JONM01	61	4497	4345	6/24/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02745855	GCA_000711875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/875/GCA_000711875.1_ASM71187v1	-	DSM 18519
Desulfotomaculum alkaliphilum DSM 12257	1121423	PRJNA234958	234958	Terrabacteria group	Firmicutes	2.62224	44.2	-	JONT01	65	2721	2574	6/24/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02745670	GCA_000711975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/975/GCA_000711975.1_ASM71197v1	-	DSM 12257
Nevskia soli DSM 19509	1122604	PRJNA235034	235034	Proteobacteria	Gammaproteobacteria	5.78061	65.1	-	JONR01	86	5167	4996	6/24/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02745696	GCA_000711955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/955/GCA_000711955.1_ASM71195v1	-	DSM 19509
Rheinheimera texasensis DSM 17496	1123055	PRJNA221070	221070	Proteobacteria	Gammaproteobacteria	4.58644	51.9	-	JONU01	12	4010	3925	6/24/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02745773	GCA_000711985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/985/GCA_000711985.1_ASM71198v1	-	DSM 17496
Salinicoccus luteus DSM 17002	1123233	PRJNA235106	235106	Terrabacteria group	Firmicutes	2.55493	49.2	-	JONV01	12	2588	2504	6/24/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02745798	GCA_000712035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/035/GCA_000712035.1_ASM71203v1	-	DSM 17002
Mycoplasma opalescens ATCC 27921	1408466	PRJNA223079	223079	Terrabacteria group	Tenericutes	0.779012	29.1	-	JOOB01	14	676	616	6/25/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02744820	GCA_000712185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/185/GCA_000712185.1_ASM71218v1	-	ATCC 27921
Ureaplasma canigenitalium ATCC 51252	1408476	PRJNA223109	223109	Terrabacteria group	Tenericutes	0.835388	31.9	-	JONZ01	9	682	626	6/25/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02744822	GCA_000712165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/165/GCA_000712165.1_ASM71216v1	-	ATCC 51252
Synergistes jonesii	2754	PRJNA245420	245420	Synergistetes	Synergistia	2.74124	56.3	-	JMKI01	60	2632	2489	6/25/14	4/9/17	Contig	UC Davis	SAMN02737376	GCA_000712295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/295/GCA_000712295.1_sjonesii4.0	25146141	78-1
Vibrio pacinii DSM 19139	1123494	PRJNA234841	234841	Proteobacteria	Gammaproteobacteria	4.30468	45.2	-	JONH01	53	3966	3805	6/24/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02745241	GCA_000711795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/795/GCA_000711795.1_ASM71179v1	-	DSM 19139
Methermicoccus shengliensis DSM 18856	1122233	PRJNA235052	235052	Euryarchaeota	Methanomicrobia	1.51358	54.7	-	JONQ01	15	1649	1558	6/24/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02746094	GCA_000711905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/905/GCA_000711905.1_ASM71190v1	-	DSM 18856
Chromobacterium haemolyticum DSM 19808	1121283	PRJNA234889	234889	Proteobacteria	Betaproteobacteria	5.0302	62.2	-	JONK01	63	4595	4400	6/24/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02745482	GCA_000711885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/885/GCA_000711885.1_ASM71188v1	-	DSM 19808
Bacillus manliponensis	574376	PRJNA252652	252652	Terrabacteria group	Firmicutes	4.64311	36	-	JOTN01	101	4720	4561	6/26/14	4/17/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02854473	GCA_000712595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/595/GCA_000712595.1_ASM71259v1	26373441	JCM 15802
Bacillus gaemokensis	574375	PRJNA252651	252651	Terrabacteria group	Firmicutes	5.59986	35.7	-	JOTM01	256	5654	5190	6/26/14	4/10/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02854354	GCA_000712615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/615/GCA_000712615.1_ASM71261v1	26373441	JCM 15801
Halomonas alkaliantarctica	232346	PRJNA241396	241396	Proteobacteria	Gammaproteobacteria	3.7979	51.9	-	JHQL01	20	3466	3356	6/27/14	4/17/17	Scaffold	Laboratory of Extremophiles	SAMN02691833	GCA_000712975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/975/GCA_000712975.1_Version_1.2.07	-	FS-N4
Exiguobacterium alkaliphilum 12/1	506480	PRJNA243884	243884	Terrabacteria group	Firmicutes	3.10194	52.8	-	JJMW01	72	3166	3056	6/27/14	4/9/17	Contig	"CSIR-IGIB, New Delhi"	SAMN02720812	GCA_000714435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/435/GCA_000714435.1_Exiguobacterium_alkaliphilum	-	1-Dec
Thioclava pacifica DSM 10166	1353537	PRJNA210304	210304	Proteobacteria	Alphaproteobacteria	3.72829	63.9	-	AUND01	42	3554	3469	6/27/14	4/17/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02893935	GCA_000714535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/535/GCA_000714535.1_SOAPdenovo_v1.05	-	DSM 10166
Thalassospira permensis NBRC 106175	1353532	PRJNA210307	210307	Proteobacteria	Alphaproteobacteria	4.43331	54.8	-	AUNC01	72	4109	4025	6/27/14	4/17/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02893934	GCA_000714555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/555/GCA_000714555.1_SOAPdenovo_v1.05	-	NBRC 106175
Anditalea andensis	1048983	PRJNA245774	245774	FCB group	Bacteroidetes/Chlorobi group	5.42941	39.2	-	JMIH01	76	4504	4368	6/27/14	4/17/17	Contig	SCELSE	SAMN02739847	GCA_000714815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/815/GCA_000714815.1_Anditalea_andensis_genome	-	LY1
Tumebacillus flagellatus	1157490	PRJNA245794	245794	Terrabacteria group	Firmicutes	4.87479	56.5	-	JMIR01	108	4658	4553	6/27/14	4/9/17	Contig	National Engineering Research Center for non-food Biorefinery	SAMN02739931	GCA_000714935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/935/GCA_000714935.1_GST4V1	"2,343,524,525,395,640"	GST4
Erythrobacter longus	1044	PRJNA245371	245371	Proteobacteria	Alphaproteobacteria	3.60216	57.4	-	JMIW01	14	3351	3254	6/27/14	4/9/17	Contig	Xiamen University	SAMN02737001	GCA_000715015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/015/GCA_000715015.1_Ery_DSM_6997_v1	25059862	DSM 6997
Georgenia sp. SUBG003	1497974	PRJNA242220	242220	Terrabacteria group	Actinobacteria	4.84219	71.8	-	JNFL01	2606	3298	2721	6/27/14	12/2/15	Contig	SaurashtraUniversity	SAMN02691830	GCA_000715355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/355/GCA_000715355.1_MIRA	26484278	SUBG003
Weissella hellenica	46256	PRJDB2932	253241	Terrabacteria group	Firmicutes	1.91562	36.6	-	BBIK01	30	1939	1791	6/26/14	4/9/17	Contig	World Institute of Kimchi	SAMD00017703	GCA_000715455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/455/GCA_000715455.1_ASM71545v1	-	Wikim14
Paraburkholderia phymatum STM815	391038	PRJNA17409	17409	Proteobacteria	Betaproteobacteria	8.67656	62.2803	chromosome 1:NC_010622.1/CP001043.1; chromosome 2:NC_010623.1/CP001044.1; plasmid pBPHY01:NC_010625.1/CP001045.1; plasmid pBPHY02:NC_010627.1/CP001046.1	-	4	7969	7496	4/22/08	8/28/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598384	GCA_000020045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/045/GCA_000020045.1_ASM2004v1	-	STM815
Kitasatospora misakiensis	67330	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.15804	73	-	JNXO01	6906	-	-	7/1/14	7/1/14	Contig	University of Illinois	SAMN02645289	GCA_000715585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/585/GCA_000715585.2_ASM71558v2	-	NRRL B-2923
Streptomyces speibonae	195801	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.76149	69.2	-	JNXM01	255	-	-	7/1/14	7/1/14	Scaffold	University of Illinois	SAMN02645287	GCA_000715605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/605/GCA_000715605.1_ASM71560v1	-	NRRL B-24240
Streptomyces cinnabarinus	67287	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.1992	68.4	-	JNXQ01	325	-	-	7/1/14	7/1/14	Scaffold	University of Illinois	SAMN02645291	GCA_000715615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/615/GCA_000715615.1_ASM71561v1	-	NRRL B-12382
Streptomyces violaceus	1936	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.2086	67.5	-	JNXN01	316	-	-	7/1/14	7/1/14	Scaffold	University of Illinois	SAMN02645288	GCA_000715635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/635/GCA_000715635.1_ASM71563v1	-	NRRL B-2867
Streptomyces lilacinus	68228	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.55847	69.5	-	JNXU01	325	-	-	7/1/14	7/1/14	Scaffold	University of Illinois	SAMN02645295	GCA_000715685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/685/GCA_000715685.1_ASM71568v1	-	NRRL B-1968
Streptomyces flavotricini	66888	PRJNA238534	238534	Terrabacteria group	Actinobacteria	6.99652	72	-	JNXV01	1862	6691	5544	7/1/14	8/21/17	Scaffold	University of Illinois	SAMN02645296	GCA_000715705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/705/GCA_000715705.1_ASM71570v1	-	NRRL B-5419
Streptomyces californicus	67281	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.78554	72.7	-	JNZZ01	105	6817	6516	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645354	GCA_000717645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/645/GCA_000717645.1_ASM71764v1	-	NRRL B-2098
Bacillus indicus	246786	PRJNA252001	252001	Terrabacteria group	Firmicutes	4.07217	44.4	-	JNVC02	24	4121	4051	6/18/14	6/15/17	Contig	GCAT-SEEK	SAMN02848465	GCA_000709935.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/935/GCA_000709935.2_ASM70993v2	"1,577,465,325,142,210"	DSM 16189
Shewanella xiamenensis	332186	PRJNA284612	284612	Proteobacteria	Gammaproteobacteria	5.36819	46.3	-	LDOA01	2	4867	4577	9/12/16	4/13/17	Contig	Laboratoire de sante publique du Quebec	SAMN03704056	GCA_001723195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/195/GCA_001723195.1_ASM172319v1	-	T17
Thioclava dalianensis	1185766	PRJNA170406	170406	Proteobacteria	Alphaproteobacteria	4.17906	62.5	-	JHEH01	98	4148	3980	6/30/14	4/9/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02673275	GCA_000715505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/505/GCA_000715505.1_SOAPdenovo_v1.05	-	DLFJ1-1
Streptomyces decoyicus	249567	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.58603	71	-	LGUU01	304	7636	7121	8/19/15	3/11/17	Contig	University of Illinois	SAMN02900588	GCA_001270575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/575/GCA_001270575.1_ASM127057v1	-	NRRL 2666
Streptomyces monomycini	371720	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.11162	71.6	-	JNYL01	223	8041	7234	7/1/14	3/9/17	Scaffold	University of Illinois	SAMN02645312	GCA_000715845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/845/GCA_000715845.1_ASM71584v1	-	NRRL B-24309
Goodfellowiella coeruleoviolacea	334858	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.38996	69.7	-	JNYI01	373	-	-	7/1/14	7/1/14	Scaffold	University of Illinois	SAMN02645309	GCA_000715825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/825/GCA_000715825.1_ASM71582v1	-	NRRL B-24058
Actinoplanes liguriensis	69484	PRJNA238534	238534	Terrabacteria group	Actinobacteria	12.4463	68.1	-	JNYN01	556	-	-	7/1/14	7/1/14	Scaffold	University of Illinois	SAMN02645314	GCA_000715855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/855/GCA_000715855.1_ASM71585v1	-	NRRL B-16723
Streptomyces flaveus	66370	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.0354	71.9	-	JOCU01	236	9108	8425	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645427	GCA_000720755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/755/GCA_000720755.1_ASM72075v1	-	NRRL WC-3505
Umezawaea tangerina	84725	PRJNA238534	238534	Terrabacteria group	Actinobacteria	11.2839	69.3	-	JNYU01	618	-	-	7/1/14	7/1/14	Scaffold	University of Illinois	SAMN02645322	GCA_000715895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/895/GCA_000715895.1_ASM71589v1	-	NRRL B-24463
Saccharopolyspora phatthalungensis	664693	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.11396	65.2	-	JNYW01	617	-	-	7/1/14	7/1/14	Scaffold	University of Illinois	SAMN02645324	GCA_000715915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/915/GCA_000715915.1_ASM71591v1	-	NRRL B-24798
Streptomyces baarnensis	66872	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.22707	71.6	-	JNZV01	77	7305	6906	7/1/14	3/9/17	Scaffold	University of Illinois	SAMN02645350	GCA_000716025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/025/GCA_000716025.1_ASM71602v1	-	NRRL B-2842
Streptomyces pyridomyceticus	68260	PRJNA238534	238534	Terrabacteria group	Actinobacteria	6.31299	72.9	-	JOAY01	139	5562	5315	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645379	GCA_000717725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/725/GCA_000717725.1_ASM71772v1	-	NRRL ISP-5024
Streptomyces peruviensis	68253	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.90141	68.9	-	JOAT01	275	-	-	7/1/14	5/13/16	Scaffold	University of Illinois	SAMN02645374	GCA_000716165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/165/GCA_000716165.1_ASM71616v1	-	NRRL ISP-5592
Nonomuraea kuesteri	281186	PRJNA238534	238534	Terrabacteria group	Actinobacteria	13.4229	67.5	-	JOAM01	439	-	-	7/1/14	7/1/14	Scaffold	University of Illinois	SAMN02645367	GCA_000716135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/135/GCA_000716135.1_ASM71613v1	-	NRRL B-24325
Streptomyces resistomycificus	67356	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.46213	69.7	-	JOBA01	141	9150	6978	7/1/14	3/9/17	Scaffold	University of Illinois	SAMN02645381	GCA_000716215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/215/GCA_000716215.1_ASM71621v1	-	NRRL ISP-5133
Streptomyces xylophagus	285514	PRJNA238534	238534	Terrabacteria group	Actinobacteria	11.3868	69.8	-	JNWO01	211	10267	9834	7/1/14	3/9/17	Contig	University of Illinois	SAMN02645193	GCA_000716435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/435/GCA_000716435.1_ASM71643v1	-	NRRL B-12029
Streptomyces wedmorensis	43759	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.38084	72.1	-	JNWK01	259	8301	7790	7/1/14	3/11/17	Contig	University of Illinois	SAMN02645189	GCA_000716445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/445/GCA_000716445.1_ASM71644v1	-	NRRL 3426
Streptomyces bikiniensis	1896	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.39066	73.1	-	JNWL01	164	6553	6187	7/1/14	8/20/15	Contig	University of Illinois	SAMN02645190	GCA_000716465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/465/GCA_000716465.1_ASM71646v1	-	NRRL B-1049
Streptomyces flaveolus	67297	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.3474	71.8	-	JNWV01	232	9360	8632	7/1/14	3/11/17	Contig	University of Illinois	SAMN02645200	GCA_000716535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/535/GCA_000716535.1_ASM71653v1	-	NRRL B-1589
Streptomyces graminis	1464081	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.8676	72.7	-	JNWT01	334	6626	6271	7/1/14	3/9/17	Contig	University of Illinois	SAMN02645198	GCA_000716525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/525/GCA_000716525.1_ASM71652v1	-	NRRL B-1570
Kitasatospora phosalacinea	2065	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.62089	74.1	-	JNWZ01	227	6848	6472	7/1/14	4/9/17	Contig	University of Illinois	SAMN02645204	GCA_000716545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/545/GCA_000716545.1_ASM71654v1	-	NRRL B-16230
Saccharothrix sp. NRRL B-16314	1463825	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.93449	71.1	-	JNXC01	273	7918	7589	7/1/14	4/9/17	Contig	University of Illinois	SAMN02645207	GCA_000716595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/595/GCA_000716595.1_ASM71659v1	-	NRRL B-16314
Sphaerisporangium viridialbum	46189	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.4669	67.3	-	JNZL01	280	-	-	7/1/14	7/1/14	Scaffold	University of Illinois	SAMN02645340	GCA_000715975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/975/GCA_000715975.1_ASM71597v1	-	NRRL B-2636
Dactylosporangium aurantiacum	35754	PRJNA238534	238534	Terrabacteria group	Actinobacteria	11.4456	73.2	-	JNYJ01	228	10185	9761	7/1/14	4/9/17	Contig	University of Illinois	SAMN02645310	GCA_000716715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/715/GCA_000716715.1_ASM71671v1	-	NRRL B-8018
Rhodococcus erythropolis	1833	PRJNA280916	280916	Terrabacteria group	Actinobacteria	6.8652	62.2758	chromosome:NZ_CP011295.1/CP011295.1; plasmid pRLCBG43:NZ_CP011296.1/CP011296.1; plasmid pRLLBG43:NZ_CP011297.1/CP011297.1; plasmid pRSLBG43:NZ_CP011298.1/CP011298.1	-	4	6396	6233	4/21/15	4/3/17	Complete Genome	Bielefeld University	SAMN03480662	GCA_000975175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/975/175/GCA_000975175.1_ASM97517v1	-	BG43
Saccharothrix syringae	103733	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.8828	73.5	-	JNYO01	190	9306	8841	7/1/14	4/17/17	Contig	University of Illinois	SAMN02645315	GCA_000716755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/755/GCA_000716755.1_ASM71675v1	-	NRRL B-16468
Streptomyces yerevanensis	66378	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.9259	69.6	-	JNWJ01	323	10051	9386	7/1/14	3/9/17	Contig	University of Illinois	SAMN02645188	GCA_000716805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/805/GCA_000716805.1_ASM71680v1	-	NRRL B-16943
Streptomyces olivaceus	47716	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.58439	72.4	-	JOFH01	188	7544	7166	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645259	GCA_000721235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/235/GCA_000721235.1_ASM72123v1	-	NRRL B-3009
Streptomyces novaecaesareae	68244	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.42799	73	-	JNWQ01	250	6540	6194	7/1/14	3/9/17	Contig	University of Illinois	SAMN02645195	GCA_000716875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/875/GCA_000716875.1_ASM71687v1	-	NRRL B-1267
Sinorhizobium meliloti	382	PRJNA244712	244712	Proteobacteria	Alphaproteobacteria	6.73341	62.2727	chromosome:NZ_CP009144.1/CP009144.1; plasmid pSymA:NZ_CP009145.1/CP009145.1; plasmid pSymB:NZ_CP009146.1/CP009146.1	-	3	6697	6307	9/3/14	4/2/17	Complete Genome	"Estacion Experimental del Zaidin, Consejo Superior de Investigaciones Cientificas (CSIC)"	SAMN02952139	GCA_000747295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/295/GCA_000747295.1_ASM74729v1	25301650	RMO17
Streptomyces alboviridis	67269	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.57109	71.3	-	JNWU01	263	7713	7353	7/1/14	3/9/17	Contig	University of Illinois	SAMN02645199	GCA_000716935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/935/GCA_000716935.1_ASM71693v1	-	NRRL B-1579
Streptomyces brasiliensis	1954	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.78135	72.7	-	JNXB01	67	6802	6515	7/1/14	3/9/17	Contig	University of Illinois	SAMN02645206	GCA_000717015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/015/GCA_000717015.1_ASM71701v1	-	NRRL B-1626
Streptomyces atroolivaceus	66869	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.21621	70.7	-	JNXG01	106	7253	6836	7/1/14	3/9/17	Contig	University of Illinois	SAMN02645281	GCA_000717025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/025/GCA_000717025.1_ASM71702v1	-	NRRL ISP-5137
Streptomyces fulvoviridis	66891	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.39851	71.1	-	JNXH01	67	6568	6298	7/1/14	3/9/17	Contig	University of Illinois	SAMN02645282	GCA_000717065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/065/GCA_000717065.1_ASM71706v1	-	NRRL ISP-5210
Streptomyces iakyrus	68219	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.12787	71.2	-	JNXI01	181	8451	7971	7/1/14	3/9/17	Contig	University of Illinois	SAMN02645283	GCA_000717055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/055/GCA_000717055.1_ASM71705v1	-	NRRL ISP-5482
Streptomyces anulatus	1892	PRJNA257397	257397	Terrabacteria group	Actinobacteria	8.84711	71.696	chromosome:NZ_CM003601.1/CM003601.1; plasmid pSanATCC11523a:NZ_CM003602.1/CM003602.1	JPZP01	2	15391	14799	9/30/15	3/12/17	Chromosome	Bielefeld University	SAMN02951406	GCA_001434355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/355/GCA_001434355.1_ASM143435v1	-	ATCC 11523
Streptomyces virginiae	1961	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.31854	72.4	-	JOAK01	133	7554	7212	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645365	GCA_000720455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/455/GCA_000720455.1_ASM72045v1	-	NRRL ISP-5094
Streptomyces capuensis	1464056	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.32983	72	-	JNWP01	144	8218	7815	7/1/14	3/11/17	Contig	University of Illinois	SAMN02645194	GCA_000716845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/845/GCA_000716845.1_ASM71684v1	-	NRRL B-12337
Catenuloplanes japonicus	33876	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.9715	71.6	-	JNXY01	133	9668	9367	7/1/14	4/21/17	Contig	University of Illinois	SAMN02645299	GCA_000717135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/135/GCA_000717135.1_ASM71713v1	-	NRRL B-16061
Streptomyces vinaceus	1960	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.062	72.4	-	JNYP01	72	7153	6830	7/1/14	3/9/17	Contig	University of Illinois	SAMN02645316	GCA_000717215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/215/GCA_000717215.1_ASM71721v1	-	NRRL ISP-5257
Actinospica acidiphila	304899	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.30927	72.6	-	JNYX01	98	6631	6345	7/1/14	4/17/17	Contig	University of Illinois	SAMN02645325	GCA_000717315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/315/GCA_000717315.1_ASM71731v1	-	NRRL B-24431
Amycolatopsis jejuensis	330084	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.1036	69.1	-	JNYZ01	136	9256	8909	7/1/14	4/17/17	Contig	University of Illinois	SAMN02645327	GCA_000717335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/335/GCA_000717335.1_ASM71733v1	-	NRRL B-24427
Desulfonatronum thiodismutans	159290	PRJNA252857	252857	Proteobacteria	delta/epsilon subdivisions	3.92365	58.7	-	JPIK01	34	3597	3491	7/16/14	4/17/17	Contig	UNLV	SAMN02886980	GCA_000717475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/475/GCA_000717475.2_ASM71747v2	25081260	MLF-1
Micromonospora globosa	47863	PRJNA238534	238534	Terrabacteria group	Actinobacteria	6.8625	73	-	JNZR01	121	6221	6033	7/2/14	4/17/17	Contig	University of Illinois	SAMN02645346	GCA_000717585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/585/GCA_000717585.1_ASM71758v1	-	NRRL B-2673
Streptomyces flavochromogenes	68199	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.88492	71.8	-	JNZO01	170	7970	7509	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645343	GCA_000717595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/595/GCA_000717595.1_ASM71759v1	-	NRRL B-2684
Streptomyces floridae	68201	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.89634	72.7	-	JOAC01	67	6835	6541	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645357	GCA_000717665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/665/GCA_000717665.1_ASM71766v1	-	NRRL 2423
Streptomyces katrae	68223	PRJNA377746	377746	Terrabacteria group	Actinobacteria	8.05645	72.6911	chromosome:NZ_CP020042.1/CP020042.1; plasmid pS3-4_1:NZ_CP020043.1/CP020043.1; plasmid pS3-4_2:NZ_CP020044.1/CP020044.1	-	3	7190	6709	3/15/17	3/17/17	Chromosome	University of Minnesota	SAMN06470724	GCA_002028425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/425/GCA_002028425.1_ASM202842v1	-	S3
[Kitasatospora] papulosa	1464011	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.56879	71	-	JNYQ01	99	6745	6432	7/1/14	4/9/17	Contig	University of Illinois	SAMN02645317	GCA_000717245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/245/GCA_000717245.1_ASM71724v1	-	NRRL B-16504
Kitasatospora arboriphila	258052	PRJNA238534	238534	Terrabacteria group	Actinobacteria	5.74804	64.5	-	JNYV01	45	5316	5162	7/1/14	4/17/17	Contig	University of Illinois	SAMN02645323	GCA_000717275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/275/GCA_000717275.1_ASM71727v1	-	NRRL B-24581
Kibdelosporangium aridum	2030	PRJEB20340	382094	Terrabacteria group	Actinobacteria	12.2761	66.2	-	FWXV01	41	11062	10634	4/8/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05661093	GCA_900176515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/515/GCA_900176515.1_IMG-taxon_2595698251_annotated_assembly	-	DSM 43828
Streptomyces griseoluteus	29306	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.10328	71.9	-	JOBE01	190	7471	7000	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645385	GCA_000717735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/735/GCA_000717735.1_ASM71773v1	-	NRRL ISP-5360
Streptomyces violens	66377	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.94152	71.4	-	JOBH01	64	7006	6734	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645388	GCA_000717745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/745/GCA_000717745.1_ASM71774v1	-	NRRL ISP-5597
Streptomyces purpeochromogenes	1464077	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.88712	72.6	-	JODK01	126	6924	6581	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645443	GCA_000717965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/965/GCA_000717965.1_ASM71796v1	-	NRRL B-3012
Streptomyces violaceorubidus	284042	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.65147	72.2	-	JODM01	282	6804	6349	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645210	GCA_000717995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/995/GCA_000717995.1_ASM71799v1	-	NRRL B-16381
Kitasatospora purpeofusca	67352	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.34347	73.6	-	JODS01	138	7968	7560	7/2/14	8/21/17	Contig	University of Illinois	SAMN02645216	GCA_000718025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/025/GCA_000718025.1_ASM71802v1	-	NRRL B-1817
Streptomyces catenulae	66875	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.04691	73	-	JODY01	91	6085	5825	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645222	GCA_000718015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/015/GCA_000718015.1_ASM71801v1	-	NRRL B-2342
Mycetocola saprophilus	76636	PRJNA238534	238534	Terrabacteria group	Actinobacteria	3.45136	66.1	-	JOEC01	20	3204	3110	7/2/14	4/9/17	Contig	University of Illinois	SAMN02645226	GCA_000718085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/085/GCA_000718085.1_ASM71808v1	-	NRRL B-24119
Streptomyces scopuliridis RB72	1440053	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.2435	70.4	-	JOEI01	117	7135	6733	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645233	GCA_000718095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/095/GCA_000718095.1_ASM71809v1	-	NRRL B-24574
Streptomyces cyaneofuscatus	66883	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.89901	71.6	-	JOEM01	127	7088	6759	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645238	GCA_000718135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/135/GCA_000718135.1_ASM71813v1	-	NRRL B-2570
Streptomyces fulvoviolaceus	285535	PRJNA238534	238534	Terrabacteria group	Actinobacteria	11.5846	70.2	-	JOEY01	263	10555	9932	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645250	GCA_000718165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/165/GCA_000718165.1_ASM71816v1	-	NRRL B-2870
Spirillospora albida	58123	PRJNA238534	238534	Terrabacteria group	Actinobacteria	6.0324	72.6	-	JOFJ01	92	5567	5386	7/2/14	4/17/17	Contig	University of Illinois	SAMN02645261	GCA_000718255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/255/GCA_000718255.1_ASM71825v1	-	NRRL B-3350
Streptomyces niger	66373	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.48542	71.7	-	JOFQ01	108	7376	6976	7/2/14	8/20/15	Contig	University of Illinois	SAMN02645268	GCA_000718305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/305/GCA_000718305.1_ASM71830v1	-	NRRL B-3857
Streptomyces griseofuscus	146922	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.94564	71.7	-	JOFU01	244	8143	7594	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645272	GCA_000718315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/315/GCA_000718315.1_ASM71831v1	-	NRRL B-5429
Ampullariella violaceochromogenes	1463979	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.51086	70.3	-	JNYT01	7975	-	-	7/2/14	7/2/14	Contig	University of Illinois	SAMN02645321	GCA_000718415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/415/GCA_000718415.2_ASM71841v2	-	NRRL B-16710
Microbispora rosea	58117	PRJEB18889	360776	Terrabacteria group	Actinobacteria	8.86637	71.1	-	FTNI01	83	8189	7818	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421833	GCA_900156315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/315/GCA_900156315.1_IMG-taxon_2681812892_annotated_assembly	-	ATCC 12950
Micromonospora parva	1464048	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.12735	71.4	-	JNZS01	88	6439	6237	7/2/14	4/9/17	Contig	University of Illinois	SAMN02645347	GCA_000718515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/515/GCA_000718515.1_ASM71851v1	-	NRRL B-2680
Micromonospora chokoriensis	356851	PRJEB14508	326367	Terrabacteria group	Actinobacteria	6.89782	71.5	chromosome I:NZ_LT607409.1/LT607409.1	-	1	6246	5998	8/15/16	7/11/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04488390	GCA_900091505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/505/GCA_900091505.1_IMG-taxon_2623620610_annotated_assembly	-	DSM 45160
Streptomyces varsoviensis	67373	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.58881	72.4	-	JOBF01	118	7286	6940	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645386	GCA_000718635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/635/GCA_000718635.1_ASM71863v1	-	NRRL ISP-5346
Streptomyces lavenduligriseus	67315	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.71685	72.3	-	JOBD01	217	7885	7374	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645384	GCA_000718625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/625/GCA_000718625.1_ASM71862v1	-	NRRL ISP-5487
Streptomyces puniceus	67351	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.17982	72.5	-	JOBQ01	83	7190	6848	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645397	GCA_000718695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/695/GCA_000718695.1_ASM71869v1	-	NRRL ISP-5083
Streptomyces megasporus	44060	PRJNA238534	238534	Terrabacteria group	Actinobacteria	5.85006	72.3	-	JODL01	195	5289	5011	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645209	GCA_000718985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/985/GCA_000718985.1_ASM71898v1	-	NRRL B-16372
Kineosporia aurantiaca JCM 3230	1306174	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.02174	69.5	-	JODP01	67	-	-	7/2/14	7/2/14	Contig	University of Illinois	SAMN02645213	GCA_000719025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/025/GCA_000719025.1_ASM71902v1	-	NRRL B-16913
Streptomyces ruber	83378	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.65743	72.2	-	JOAQ01	124	8194	7818	7/15/14	3/11/17	Scaffold	University of Illinois	SAMN02645371	GCA_000725575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/575/GCA_000725575.1_Doro.v1.0	-	NRRL ISP-5378
Herbidospora cretacea	28444	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.17254	70.9	-	JODQ01	65	7391	7168	7/2/14	4/9/17	Contig	University of Illinois	SAMN02645214	GCA_000719065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/065/GCA_000719065.1_ASM71906v1	-	NRRL B-16917
Streptacidiphilus jeojiense	436229	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.15672	71.5	-	JOEH01	144	8063	7769	7/2/14	4/17/17	Contig	University of Illinois	SAMN02645232	GCA_000719095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/095/GCA_000719095.1_ASM71909v1	-	NRRL B-24555
Streptomyces sclerotialus	1957	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.02238	71.5	-	JODX01	92	6327	5939	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645221	GCA_000719105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/105/GCA_000719105.1_ASM71910v1	-	NRRL B-2317
Streptomyces avicenniae	500153	PRJNA238534	238534	Terrabacteria group	Actinobacteria	6.48033	73.5	-	JOEK01	66	5920	5671	7/2/14	8/20/15	Contig	University of Illinois	SAMN02645236	GCA_000719135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/135/GCA_000719135.1_ASM71913v1	-	NRRL B-24776
Lentzea albidocapillata	40571	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.64248	68.7	-	JOEA01	127	8180	7932	7/2/14	4/17/17	Contig	University of Illinois	SAMN02645224	GCA_000719115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/115/GCA_000719115.1_ASM71911v1	-	NRRL B-24057
Lechevalieria aerocolonigenes	68170	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.6487	69	-	JOFI01	204	9783	9497	7/2/14	4/9/17	Contig	University of Illinois	SAMN02645260	GCA_000719205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/205/GCA_000719205.1_ASM71920v1	-	NRRL B-3298
Glycomyces sp. NRRL B-16210	1463821	PRJNA238534	238534	Terrabacteria group	Actinobacteria	4.96238	70.5	-	JOGR01	35	4408	4264	7/2/14	4/9/17	Contig	University of Illinois	SAMN02645460	GCA_000719515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/515/GCA_000719515.1_ASM71951v1	-	NRRL B-16210
Streptomyces albidoflavus	1886	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.08469	73.4	-	JOII01	115	6166	5941	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645503	GCA_000719955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/955/GCA_000719955.1_ASM71995v1	-	NRRL B-1271
Streptomyces roseoverticillatus	66429	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.20548	72.4	-	JOFL01	96	6257	5951	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645263	GCA_000719265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/265/GCA_000719265.1_ASM71926v1	-	NRRL B-3500
Pilimelia anulata	53371	PRJNA238534	238534	Terrabacteria group	Actinobacteria	6.98001	69.9	-	JOFP01	81	6352	6190	7/2/14	4/17/17	Contig	University of Illinois	SAMN02645267	GCA_000719275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/275/GCA_000719275.1_ASM71927v1	-	NRRL B-3741
Streptomyces bicolor	66874	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.62453	70.5	-	JOFR01	225	8664	8060	7/15/14	3/11/17	Scaffold	University of Illinois	SAMN02645269	GCA_000725465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/465/GCA_000725465.1_Doro.v1.0	-	NRRL B-3897
Prauserella rugosa	43354	PRJNA238534	238534	Terrabacteria group	Actinobacteria	5.22082	70	-	JOIJ01	98	4880	4713	7/2/14	4/17/17	Contig	University of Illinois	SAMN02645504	GCA_000719975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/975/GCA_000719975.1_ASM71997v1	-	NRRL B-2295
Marmoricola aequoreus	397278	PRJNA238534	238534	Terrabacteria group	Actinobacteria	4.1635	72.9	-	JOJN01	43	3948	3828	7/2/14	4/17/17	Contig	University of Illinois	SAMN02645230	GCA_000720335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/335/GCA_000720335.1_ASM72033v1	-	NRRL B-24464
Streptomyces aureocirculatus	67275	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.31575	71.2	-	JOAR01	205	8162	7537	7/15/14	3/11/17	Scaffold	University of Illinois	SAMN02645372	GCA_000725745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/745/GCA_000725745.1_Doro.v1.0	-	NRRL ISP-5401
Streptomyces ochraceiscleroticus	47761	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.40857	71.4	-	JOAX01	147	7364	7051	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645378	GCA_000720485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/485/GCA_000720485.1_ASM72048v1	-	NRRL ISP-5594
Streptomyces halstedii	1944	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.74084	71.9	-	JOAZ01	105	6795	6445	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645380	GCA_000720535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/535/GCA_000720535.1_ASM72053v1	-	NRRL ISP-5068
Streptomyces achromogenes subsp. achromogenes	67256	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.11241	72.5	-	JODT01	163	7323	6912	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645217	GCA_000720835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/835/GCA_000720835.1_ASM72083v1	-	NRRL B-2120
Phycicoccus jejuensis	367299	PRJNA238534	238534	Terrabacteria group	Actinobacteria	3.98555	73.5	-	JOEE01	97	3820	3683	7/2/14	4/17/17	Contig	University of Illinois	SAMN02645228	GCA_000720925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/925/GCA_000720925.1_ASM72092v1	-	NRRL B-24460
Actinocatenispora sera	390989	PRJNA238534	238534	Terrabacteria group	Actinobacteria	6.94724	72.7	-	JOEG01	78	6393	6174	7/2/14	4/17/17	Contig	University of Illinois	SAMN02645231	GCA_000720965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/965/GCA_000720965.1_ASM72096v1	-	NRRL B-24477
Allokutzneria albata	211114	PRJEB16194	348926	Terrabacteria group	Actinobacteria	8.56562	70.3	chromosome I:NZ_LT629701.1/LT629701.1	-	1	7908	7641	10/20/16	4/13/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489726	GCA_900103775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/775/GCA_900103775.1_IMG-taxon_2634166198_annotated_assembly	-	DSM 44149
Streptomyces celluloflavus	58344	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.67652	71.7	-	JOEL01	193	7233	6828	7/2/14	8/20/15	Contig	University of Illinois	SAMN02645237	GCA_000720995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/995/GCA_000720995.1_ASM72099v1	-	NRRL B-2493
Streptosporangium amethystogenes	2002	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.44108	69.4	-	JOEQ01	229	8483	8055	7/2/14	4/17/17	Contig	University of Illinois	SAMN02645242	GCA_000721075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/075/GCA_000721075.1_ASM72107v1	-	NRRL B-2639
Streptomyces cellulosae	1968	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.0631	70.6	-	JOEV01	182	9095	8405	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645247	GCA_000721105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/105/GCA_000721105.1_ASM72110v1	-	NRRL B-2687
Micromonospora purpureochromogenes	47872	PRJEB14513	326379	Terrabacteria group	Actinobacteria	6.67423	73	chromosome I:NZ_LT607410.1/LT607410.1	-	1	6113	5806	8/15/16	7/11/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489819	GCA_900091515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/515/GCA_900091515.1_IMG-taxon_2627854289_annotated_assembly	-	DSM 43821
Streptomyces griseolus	1909	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.53754	72	-	JOFC01	139	6586	6248	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645254	GCA_000721185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/185/GCA_000721185.1_ASM72118v1	-	NRRL B-2925
Streptomyces avellaneus	68178	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.4092	72.7	-	JOFK01	270	6492	6069	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645262	GCA_000721255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/255/GCA_000721255.1_ASM72125v1	-	NRRL B-3447
Microtetraspora glauca	1996	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.47636	73.6	-	JOFO01	255	6894	6563	7/2/14	4/9/17	Contig	University of Illinois	SAMN02645266	GCA_000721275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/275/GCA_000721275.1_ASM72127v1	-	NRRL B-3735
Streptomyces mediolani	68237	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.1209	71.4	-	JOJK01	98	7394	6975	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645531	GCA_000721685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/685/GCA_000721685.1_ASM72168v1	-	NRRL WC-3934
Actinoplanes subtropicus	543632	PRJNA238534	238534	Terrabacteria group	Actinobacteria	11.2573	71.2	-	JOJL01	216	10271	9775	7/2/14	4/17/17	Contig	University of Illinois	SAMN02645318	GCA_000721705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/705/GCA_000721705.1_ASM72170v1	-	NRRL B-24665
Streptomyces thermotolerans	80858	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.4531	68.7	-	JOBY01	532	-	-	7/1/14	7/3/14	Scaffold	University of Illinois	SAMN02645405	GCA_000721965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/965/GCA_000721965.1_ASM72196v1	-	NRRL WC-3628
Streptomyces durhamensis	68194	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.31237	71.7	-	JNXR01	218	8501	7891	7/15/14	3/11/17	Scaffold	University of Illinois	SAMN02645292	GCA_000725475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/475/GCA_000725475.1_Doro.v1.0	-	NRRL B-3309
Endozoicomonas numazuensis	1137799	PRJNA252578	252578	Proteobacteria	Gammaproteobacteria	6.34223	47.1	-	JOKH01	31	5442	5126	7/7/14	4/9/17	Scaffold	Woods Hole Oceanographic Institution	SAMN02851612	GCA_000722635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/635/GCA_000722635.1_ASM72263v1	25125646	DSM 25634
Pedobacter antarcticus 4BY	1358423	PRJNA211972	211972	FCB group	Bacteroidetes/Chlorobi group	4.56632	40.4	-	JNFF01	122	4132	3889	7/7/14	7/3/17	Contig	Centre for Cellular and Molecular Biology	SAMN02777956	GCA_000722885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/885/GCA_000722885.1_ASM72288v1	25278517	4BY
Xanthomonas fragariae	48664	PRJNA336188	336188	Proteobacteria	Gammaproteobacteria	4.2826	62.2723	chromosome:NZ_CP016833.1/CP016833.1; plasmid pFap29-1:NZ_CP016834.1/CP016834.1; plasmid pFap29-2:NZ_CP016835.1/CP016835.1	-	3	4010	3209	8/16/16	4/13/17	Complete Genome	University of California at Davis	SAMN05505398	GCA_001705545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/545/GCA_001705545.1_ASM170554v1	-	-
Thaumarchaeota archaeon N4	1407055	PRJEB4650	252445	TACK group	Thaumarchaeota	1.63613	42.2	-	CBTY01	14	1919	1854	11/28/13	4/9/17	Contig	Genoscope CEA	SAMEA3139018	GCA_000723185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/185/GCA_000723185.1_APF_1883_PRJEB4650	24278328	N4
Formosa agariphila KMM 3901	1347342	PRJEB3965	252442	FCB group	Bacteroidetes/Chlorobi group	4.22835	33.6	chromosome I:NZ_HG315671.1/HG315671.1	-	1	3588	3482	8/31/13	4/18/17	Chromosome	MPI BREMEN	SAMEA3139019	GCA_000723205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/205/GCA_000723205.1_FAGA1	23995932	type strain: KMM 3901
Wolbachia endosymbiont wPip_Mol of Culex molestus	1402163	PRJEB4607	252448	Proteobacteria	Alphaproteobacteria	1.43568	35	-	CTEH01	103	1240	1088	3/25/15	6/10/17	Scaffold	WTSI	SAMEA3139020	GCA_000723225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/225/GCA_000723225.2_Wolbachia_endosymbiont_wPip_Mol_of_Culex_molestus	-	wPip_Mol
Hydrogenophaga intermedia	65786	PRJEB5271	247744	Proteobacteria	Betaproteobacteria	5.28813	68.4	-	CCAE01	124	5120	4974	5/11/14	4/9/17	Contig	SVSB	SAMEA3139028	GCA_000723405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/405/GCA_000723405.1_HINTER_V1	-	S1
Xanthomonas fragariae	48664	PRJNA336188	336188	Proteobacteria	Gammaproteobacteria	4.2827	62.2722	chromosome:NZ_CP016830.1/CP016830.1; plasmid pFap21-1:NZ_CP016831.1/CP016831.1; plasmid pFap21-2:NZ_CP016832.1/CP016832.1	-	3	4004	3203	8/16/16	4/13/17	Complete Genome	University of California at Davis	SAMN05505397	GCA_001705565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/565/GCA_001705565.1_ASM170556v1	-	-
Halobacillus trueperi	156205	PRJEB5510	244991	Terrabacteria group	Firmicutes	4.0829	41.7	-	CCDJ01	7	4039	3804	5/15/14	4/17/17	Contig	URMITE	SAMEA3139034	GCA_000723525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/525/GCA_000723525.1_PRJEB5510_assembly_1	-	HT-01
Saccharibacter sp. AM169	1343158	PRJEB4017	251320	Proteobacteria	Alphaproteobacteria	1.97809	59.3	-	CBLY01	9	1768	1698	5/30/14	4/9/17	Contig	UNIMI	SAMEA3139036	GCA_000723565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/565/GCA_000723565.1_SACS	"2,480,472,224,682,150"	AM168
Marine Group I thaumarchaeote SCGC AAA799-N04	1502293	PRJNA248337	248337	TACK group	Thaumarchaeota	1.29672	34.2	-	JOKN01	119	1799	1767	7/7/14	7/7/14	Contig	King Abdullah University of Science and Technology	SAMN02854326	GCA_000722915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/915/GCA_000722915.1_ASM72291v1	-	-
Bacillus vietnamensis NBRC 101237	1349757	PRJDB1341	231397	Terrabacteria group	Firmicutes	4.41088	43.7	-	BCVQ01	123	4418	4333	2/27/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00047004	GCA_001591825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/825/GCA_001591825.1_ASM159182v1	-	NBRC 101237
Oceanobacillus manasiensis	586413	PRJEB5523	239164	Terrabacteria group	Firmicutes	3.80733	38.5	-	CCDL01	7	3763	3641	5/15/14	4/17/17	Contig	URMITE	SAMEA3139062	GCA_000724085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/085/GCA_000724085.1_PRJEB5523_assembly_1	-	S2
Halobacillus dabanensis	240302	PRJEB5508	244996	Terrabacteria group	Firmicutes	4.10233	41.5	-	CCDH01	11	4055	3863	5/15/14	4/9/17	Contig	URMITE	SAMEA3139063	GCA_000724105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/105/GCA_000724105.1_PRJEB5508_assembly_1	-	HD-02
Marine Group I thaumarchaeote SCGC AAA799-E16	1502292	PRJNA248336	248336	TACK group	Thaumarchaeota	1.41532	34.2	-	JNVL01	167	1945	1910	7/8/14	7/8/14	Contig	King Abdullah University of Science and Technology	SAMN02851527	GCA_000724145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/145/GCA_000724145.1_ASM72414v1	-	-
Chlorobium sp. KB01	1917528	PRJNA353282	353282	FCB group	Bacteroidetes/Chlorobi group	2.57054	49.7	-	MPJE01	116	2509	2321	1/30/17	4/17/17	Contig	UBC	SAMN06013566	GCA_001975465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/465/GCA_001975465.1_ASM197546v1	-	KB01
Clostridium haemolyticum NCTC 9693	1443114	PRJNA233468	233468	Terrabacteria group	Firmicutes	2.60766	27.4046	plasmid p1Ch9693:NZ_CM003349.1/CM003349.1	JENX01	125	2596	2397	6/20/14	4/10/17	Contig	National Veterinary Institute (SVA)	SAMN02593758	GCA_000724225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/225/GCA_000724225.2_NCTC9693_1.0	25254374	NCTC 9693
Aureispira sp. CCB-QB1	1313421	PRJNA239761	239761	FCB group	Bacteroidetes/Chlorobi group	7.3676	35.7	-	JHBV01	185	5795	5593	7/9/14	4/9/17	Contig	Universiti Sains Malaysia	SAMN02670898	GCA_000724545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/545/GCA_000724545.1_Aureispira_sp._CCB-QB1_genome	-	CCB-QB1
Xanthomonas fragariae	48664	PRJEB20806	387713	Proteobacteria	Gammaproteobacteria	4.28394	62.2716	chromosome 1:NZ_LT853885.1/LT853885.1; plasmid pPD5205-30:NZ_LT853886.1/LT853886.1; plasmid pPD5205.21:NZ_LT853887.1/LT853887.1	-	3	4019	3277	5/24/17	7/19/17	Complete Genome	JLU	SAMEA104068691	GCA_900183995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/995/GCA_900183995.1_PD5205.1	-	PD5205
Streptomyces toyocaensis	55952	PRJNA239004	239004	Terrabacteria group	Actinobacteria	7.34101	72	-	JFCB01	85	6679	6291	7/14/14	3/11/17	Contig	The university of Cambridge	SAMN02649413	GCA_000725125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/125/GCA_000725125.1_ASM72512v1	25081262	NRRL 15009
Singulisphaera acidiphila DSM 18658	886293	PRJNA52461	52461	PVC group	Planctomycetes	9.75569	62.2672	chromosome:NC_019892.1/CP003364.1; plasmid pSINAC01:NC_019893.1/CP003365.1; plasmid pSINAC02:NC_019894.1/CP003366.1; plasmid pSINAC03:NC_019895.1/CP003367.1	-	4	7592	7377	12/17/12	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02232051	GCA_000242455.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/455/GCA_000242455.3_ASM24245v3	-	DSM 18658
Xanthomonas fragariae	48664	PRJEB20805	387712	Proteobacteria	Gammaproteobacteria	4.32844	62.2546	chromosome 1:NZ_LT853882.1/LT853882.1; plasmid pPD885-27:NZ_LT853884.1/LT853884.1; plasmid pPD885-29:NZ_LT853883.1/LT853883.1	-	3	4046	3311	5/24/17	7/12/17	Complete Genome	JLU	SAMEA104068692	GCA_900183975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/975/GCA_900183975.1_PD885.1	-	PD885
Streptomyces flavovariabilis	284031	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.76226	71.2	-	JNXD01	141	7963	7493	7/15/14	3/11/17	Scaffold	University of Illinois	SAMN02645208	GCA_000725785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/785/GCA_000725785.1_Doro.v1.0	-	NRRL B-16367
Streptomyces seoulensis	73044	PRJNA238534	238534	Terrabacteria group	Actinobacteria	6.38341	71.9	-	JNXP01	75	5878	5641	7/15/14	3/11/17	Scaffold	University of Illinois	SAMN02645290	GCA_000725795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/795/GCA_000725795.1_Doro.v1.0	-	NRRL B-24310
Nonomuraea candida	359159	PRJNA238534	238534	Terrabacteria group	Actinobacteria	11.0062	72.1	-	JOAG01	231	10020	9567	7/15/14	4/17/17	Scaffold	University of Illinois	SAMN02645361	GCA_000725485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/485/GCA_000725485.1_Doro.v1.0	-	NRRL B-24552
Streptomyces erythrochromogenes	285574	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.50752	72.2	-	JNZG01	127	6853	6468	7/15/14	3/11/17	Scaffold	University of Illinois	SAMN02645335	GCA_000725555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/555/GCA_000725555.1_Doro.v1.0	-	NRRL B-2112
Streptomyces xanthophaeus	67385	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.56841	72.2	-	JNZH01	147	7758	7380	7/15/14	3/11/17	Scaffold	University of Illinois	SAMN02645336	GCA_000725725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/725/GCA_000725725.1_Doro.v1.0	-	NRRL B-3004
Streptomyces aureus	193461	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.92805	71.5	-	JNZD01	131	8643	8247	7/15/14	3/11/17	Scaffold	University of Illinois	SAMN02645331	GCA_000725495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/495/GCA_000725495.1_Doro.v1.0	-	NRRL B-1941
Chryseobacterium antarcticum	266748	PRJNA254051	254051	FCB group	Bacteroidetes/Chlorobi group	3.12366	36.1	-	JPEP01	4	2883	2815	7/16/14	4/9/17	Contig	Lycoming College	SAMN02899065	GCA_000729985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/985/GCA_000729985.1_ASM72998v1	-	LMG 24720
Sinorhizobium meliloti	382	PRJNA369312	369312	Proteobacteria	Alphaproteobacteria	6.704	62.2385	chromosome:NZ_CP019584.1/CP019584.1; plasmid pSymA:NZ_CP019585.1/CP019585.1; plasmid pSymB:NZ_CP019586.1/CP019586.1	-	3	6683	6176	7/6/17	7/21/17	Complete Genome	BRC 	SAMN06284128	GCA_002215195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/195/GCA_002215195.1_ASM221519v1	-	CCMM B554 (FSM-MA)
Arthrobacter sp. Rue61a	1118963	PRJNA78011	78011	Terrabacteria group	Actinobacteria	5.08104	62.2324	chromosome:NC_018531.1/CP003203.1; plasmid p232:NC_018532.1/CP003204.1; plasmid pAL1:NC_009453.1/CP003205.1	-	3	4693	4568	9/6/12	4/8/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02603270	GCA_000294695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/695/GCA_000294695.2_ASM29469v2	23039946	Rue61a
Jannaschia sp. CCS1	290400	PRJNA12733	12733	Proteobacteria	Alphaproteobacteria	4.40405	62.2121	chromosome:NC_007802.1/CP000264.1; plasmid plasmid1:NC_007801.1/CP000265.1	-	2	4363	4271	2/27/06	5/18/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598279	GCA_000013565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/565/GCA_000013565.1_ASM1356v1	17526795	CCS1
Vibrio metoecus	1481663	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.93846	46.9	-	LBGQ01	71	3715	3538	10/22/15	4/4/17	Scaffold	University of Alberta	SAMN03488026	GCA_001402345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/345/GCA_001402345.1_ASM140234v1	26454015	YB5B06
Caballeronia sordidicola	196367	PRJEB12475	309797	Proteobacteria	Betaproteobacteria	6.87451	60.1	-	FCOC02	72	6173	5981	1/28/16	4/12/17	Contig	LM-UGent	SAMEA3731251	GCA_001544455.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/455/GCA_001544455.2_Burkholderia_sordidicola_LMG_22029	-	-
Photobacterium sanctipauli	1342794	PRJNA241370	241370	Proteobacteria	Gammaproteobacteria	5.68959	48.1	-	JGVO01	1636	5488	4710	7/17/14	4/9/17	Contig	UFRJ	SAMN02689500	GCA_000730475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/475/GCA_000730475.1_Psan_v.1	25024905	A-394
Lactococcus chungangensis CAU 28 = DSM 22330	1122154	PRJEB17964	353832	Terrabacteria group	Firmicutes	2.21494	38.7	-	FPKS01	44	2199	2081	11/18/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02746068	GCA_900119835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/835/GCA_900119835.1_IMG-taxon_2599185262_annotated_assembly	-	DSM 22330
Halobacillus karajensis	195088	PRJEB15818	347771	Terrabacteria group	Firmicutes	4.07089	41.4	-	FNWW01	24	4039	3836	10/27/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192559	GCA_900108515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/515/GCA_900108515.1_IMG-taxon_2651870103_annotated_assembly	-	DSM 14948
Rhizobium vignae	690585	PRJNA251791	251791	Proteobacteria	Alphaproteobacteria	6.34305	61.6	-	JNNU01	84	6150	5933	7/21/14	4/17/17	Contig	85303	SAMN02840656	GCA_000732195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/195/GCA_000732195.1_ASM73219v1	25081255	CCBAU 05176
Nonlabens ulvanivorans	906888	PRJNA255202	255202	FCB group	Bacteroidetes/Chlorobi group	3.21139	35	-	JPJI01	45	2911	2842	7/22/14	4/9/17	Scaffold	Bar Ilan university	SAMN02911279	GCA_000732625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/625/GCA_000732625.1_ASM73262v1	25125644	PLR
Candidatus Photodesmus blepharus	1179155	PRJNA239713	239713	Proteobacteria	Gammaproteobacteria	1.11231	35.6	-	JGVK01	33	1009	967	7/18/14	4/9/17	Contig	University of Michigan	SAMN02666855	GCA_000731795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/795/GCA_000731795.1_ASM73179v1	-	Ppalp.1
Halomonas zincidurans B6	1446475	PRJNA234075	234075	Proteobacteria	Gammaproteobacteria	3.55476	64.4	-	JNCK01	2	3287	3133	7/21/14	4/17/17	Contig	"Second Institute of Oceanography and Laboratory of Marine Ecosystem and Biogeochemistry, State Oceanic Administration"	SAMN02741068	GCA_000731955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/955/GCA_000731955.1_B6	-	B6
Clostridium sulfidigenes	318464	PRJNA255540	255540	Terrabacteria group	Firmicutes	3.71742	30	-	JPMD01	96	3611	3414	7/22/14	4/17/17	Contig	Agharkar Research Institute	SAMN02925393	GCA_000732635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/635/GCA_000732635.1_CloSul1.0	-	113A
Pseudomonas stutzeri	316	PRJNA242326	242326	Proteobacteria	Gammaproteobacteria	4.8334	62.2064	chromosome:NZ_CP007509.1/CP007509.1; plasmid pLIB119:NZ_CP007510.1/CP007510.1	-	2	4533	4381	5/1/14	4/2/17	Complete Genome	Univesitat de les Illes Balears (UIB)	SAMN02692943	GCA_000661915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/915/GCA_000661915.1_ASM66191v1	-	19SMN4
Verrucomicrobia bacterium	2026799	PRJNA404023	404023	PVC group	Verrucomicrobia	4.73045	62.2	chromosome:NZ_CP023344.1/CP023344.1	-	1	3833	3761	9/18/17	9/20/17	Complete Genome	Nakdonggang National Institute of Biological Resources	SAMN07628394	GCA_002310495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/495/GCA_002310495.1_ASM231049v1	-	HZ-65
Parvularcula oceani	1247963	PRJNA254938	254938	Proteobacteria	Alphaproteobacteria	3.3545	67.4	-	JPHU01	38	3144	3053	7/24/14	4/9/17	Contig	"State Key Laboratory of marine Environmental Science, College of Ocean and Earth Sciences, Xiamen University"	SAMN02905868	GCA_000733125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/125/GCA_000733125.1_ASM73312v1	-	JLT2013
Desulfobacula sp. TS	1232437	PRJNA175250	175250	Proteobacteria	delta/epsilon subdivisions	5.37184	42.8	-	JIBV01	125	5585	3998	7/24/14	8/21/17	Scaffold	Chungbuk National University	SAMN02692668	GCA_000732885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/885/GCA_000732885.1_ASM73288v1	-	TS
Archangium violaceum Cb vi76	1406225	PRJNA221595	221595	Proteobacteria	delta/epsilon subdivisions	12.5378	68.9	-	JPMI01	431	10291	9771	7/25/14	4/17/17	Contig	University of Notre Dame	SAMN02910210	GCA_000733295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/295/GCA_000733295.1_ASM73329v1	25502681	Cb vi76
Mangrovimonas yunxiaonensis	1197477	PRJNA254375	254375	FCB group	Bacteroidetes/Chlorobi group	2.67003	39.2	-	JPFK01	11	2466	2389	7/25/14	4/17/17	Contig	"School of Life Sciences, Xiamen University"	SAMN02903170	GCA_000733475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/475/GCA_000733475.1_ASM73347v1	25428978	LY01
Algiphilus aromaticivorans DG1253	1415780	PRJNA225851	225851	Proteobacteria	Gammaproteobacteria	3.80568	66.4	-	JPOG01	2	3601	3508	7/24/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02744755	GCA_000733765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/765/GCA_000733765.1_ASM73376v1	-	DG1253
Mycoplasma buteonis	171280	PRJNA245612	245612	Terrabacteria group	Tenericutes	0.85003	27.6	-	JPOK01	12	706	643	7/24/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02745656	GCA_000733865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/865/GCA_000733865.1_ASM73386v1	-	ATCC 51371
Geobacillus vulcani PSS1	1382315	PRJNA214297	214297	Terrabacteria group	Firmicutes	3.38911	52.4	-	JPOI01	1	3497	3231	7/24/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02744877	GCA_000733845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/845/GCA_000733845.1_ASM73384v1	26951067	PSS1
Methylomicrobium agile	39774	PRJNA239499	239499	Proteobacteria	Gammaproteobacteria	4.52607	56.2	-	JPOJ01	4	4024	3784	7/24/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02745538	GCA_000733855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/855/GCA_000733855.1_ASM73385v1	-	ATCC 35068
Desulfuromonas sp. DDH964	1823759	PRJNA316855	316855	Proteobacteria	delta/epsilon subdivisions	3.92465	62.2	chromosome:NZ_CP015080.1/CP015080.1	-	1	3617	3507	4/5/16	4/12/17	Complete Genome	University of Minnesota	SAMN04590833	GCA_001611275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/275/GCA_001611275.1_ASM161127v1	-	DDH964
Chryseobacterium haifense DSM 19056	1450526	PRJNA235853	235853	FCB group	Bacteroidetes/Chlorobi group	2.84574	36.9	-	JASZ02	96	2803	2607	7/29/14	6/22/17	Contig	Genome Consortium of Active Teaching	SAMN02586124	GCA_000735695.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/695/GCA_000735695.2_ASM73569v2	-	DSM 19056
Flavobacterium chungangense LMG 26729	1453505	PRJNA236354	236354	FCB group	Bacteroidetes/Chlorobi group	5.59155	33.7	-	JASY01	45	4768	4633	7/29/14	4/16/17	Contig	GCAT-SEEK	SAMN02595411	GCA_000735715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/715/GCA_000735715.2_ASM73571v2	-	LMG 26729
Schleiferia thermophila str. Yellowstone	1453500	PRJNA236114	236114	FCB group	Bacteroidetes/Chlorobi group	2.61769	42.9	-	JDSI01	35	2283	2207	7/30/14	4/17/17	Contig	The Pennsylvania State University	SAMN02595509	GCA_000736515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/515/GCA_000736515.1_ASM73651v1	25169864	Yellowstone
Variibacter gotjawalensis	1333996	PRJDB4185	303079	Proteobacteria	Alphaproteobacteria	4.58624	62.2	chromosome:AP014946.1	-	1	4493	4437	11/20/15	11/20/15	Complete Genome	Korea Research Institute of Bioscience and Biotechnology (KRIBB)	SAMD00039968	GCA_002355335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/335/GCA_002355335.1_ASM235533v1	-	GJW-30
Caulobacteraceae bacterium PMMR1	1382303	PRJNA214301	214301	Proteobacteria	Alphaproteobacteria	2.67343	71.1	-	JPOM01	1	2600	2368	7/24/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02745000	GCA_000733915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/915/GCA_000733915.1_ASM73391v1	-	PMMR1
Methylomarinum vadi	438855	PRJNA246204	246204	Proteobacteria	Gammaproteobacteria	4.33516	51.3	-	JPON01	1	4066	3829	7/24/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02745036	GCA_000733935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/935/GCA_000733935.1_ASM73393v1	26798114	IT-4
Ferrovum myxofaciens	416213	PRJNA255880	255880	Proteobacteria	Betaproteobacteria	2.70219	54.3	-	JPOQ01	646	2596	2426	7/28/14	4/17/17	Contig	Fundacion Ciencia & Vida	SAMN02929444	GCA_000735045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/045/GCA_000735045.1_Fv_myxofaciens_P3G_1.0	25146142	P3G
Chryseobacterium halperniae	421072	PRJNA255518	255518	FCB group	Bacteroidetes/Chlorobi group	4.23639	37.8	-	JPLY01	22	3957	3847	7/28/14	5/22/17	Contig	GCAT-SEEK	SAMN02924066	GCA_000735105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/105/GCA_000735105.1_ASM73510v1	-	LMG 24401
Arthrobacter alpinus	656366	PRJNA295631	295631	Terrabacteria group	Actinobacteria	4.04645	62.2	chromosome:NZ_CP012677.1/CP012677.1	-	1	3732	3523	9/18/15	4/11/17	Complete Genome	University of Malaya	SAMN04076496	GCA_001294625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/625/GCA_001294625.1_ASM129462v1	-	R3.8
Sciscionella sp. SE31	1445613	PRJNA233984	233984	Terrabacteria group	Actinobacteria	7.42034	68.7	-	JALM01	216	7092	6839	8/1/14	4/11/17	Scaffold	Universiti Malaya	SAMN02582401	GCA_000737195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/195/GCA_000737195.2_ASM73719v2	-	SE31
Enhygromyxa salina	215803	PRJNA242456	242456	Proteobacteria	delta/epsilon subdivisions	10.4353	67.4	-	JMCC02	330	8164	8164	8/4/14	8/31/15	Contig	IMTECH-CSIR	SAMN02719576	GCA_000737335.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/335/GCA_000737335.3_ASM73733v3	-	DSM 15201
Hyalangium minutum	394096	PRJNA242458	242458	Proteobacteria	delta/epsilon subdivisions	11.1862	68	-	JMCB01	44	8967	8614	8/4/14	4/17/17	Contig	IMTECH-CSIR	SAMN02719563	GCA_000737315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/315/GCA_000737315.1_ASM73731v1	-	DSM 14724
Actinotignum schaalii	59505	PRJNA247940	247940	Terrabacteria group	Actinobacteria	2.15931	62.2	chromosome:NZ_CP008802.1/CP008802.1	-	1	1804	1693	7/10/14	9/25/17	Complete Genome	Aalborg University	SAMN02900471	GCA_000724605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/605/GCA_000724605.1_ASM72460v1	25189588	CCUG 27420
Chryseobacterium formosense	236814	PRJNA256039	256039	FCB group	Bacteroidetes/Chlorobi group	4.36466	34.8	-	JPRP01	10	4000	3879	8/5/14	4/9/17	Contig	GCAT-SEEK	SAMN02937280	GCA_000737665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/665/GCA_000737665.1_ASM73766v1	-	LMG 24722
Flavobacterium hydatis	991	PRJNA255966	255966	FCB group	Bacteroidetes/Chlorobi group	5.87767	32.7	-	JPRM01	99	5048	4890	8/5/14	4/9/17	Contig	GCAT-SEEK	SAMN02934144	GCA_000737695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/695/GCA_000737695.1_ASM73769v1	-	DSM 2063
Chryseobacterium soli	445961	PRJNA255943	255943	FCB group	Bacteroidetes/Chlorobi group	4.75448	36.4	-	JPRH01	26	4371	4249	8/5/14	4/17/17	Contig	GCAT-SEEK	SAMN02934080	GCA_000737705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/705/GCA_000737705.1_ASM73770v1	-	DSM 19298
Flavobacterium reichenbachii	362418	PRJNA255951	255951	FCB group	Bacteroidetes/Chlorobi group	5.5014	33.6	-	JPRL01	12	4811	4672	8/5/14	4/17/17	Contig	GCAT-SEEK	SAMN02934140	GCA_000737685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/685/GCA_000737685.1_ASM73768v1	-	LMG 25512
Chryseobacterium piperi	558152	PRJNA255644	255644	FCB group	Bacteroidetes/Chlorobi group	4.34059	35.2	-	JPRJ01	89	3826	3668	8/5/14	4/17/17	Contig	GCAT-SEEK	SAMN02927203	GCA_000737775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/775/GCA_000737775.1_ASM73777v1	-	CTM
Chryseobacterium luteum	421531	PRJNA256038	256038	FCB group	Bacteroidetes/Chlorobi group	4.71855	37.3	-	JPRO01	49	4378	4208	8/5/14	4/17/17	Contig	GCAT-SEEK	SAMN02937279	GCA_000737785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/785/GCA_000737785.1_ASM73778v1	-	DSM 18605
Bifidobacterium bombi DSM 19703	1341695	PRJNA206551	206551	Terrabacteria group	Actinobacteria	1.89524	56.1	-	ATLK01	4	1502	1403	8/5/14	4/9/17	Contig	University of Parma	SAMN02952076	GCA_000737845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/845/GCA_000737845.1_BBOMBassembly	25085493	DSM 19703
Gammaproteobacteria bacterium MFB021	1492922	PRJNA252802	252802	Proteobacteria	Gammaproteobacteria	4.4362	65.7	-	JNVT01	136	4023	3798	8/5/14	4/9/17	Contig	"Central Institute of Fisheries Technology, Cochin"	SAMN02863077	GCA_000737985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/985/GCA_000737985.1_Gammaproteobacteria1.0	25414494	MFB021
Bifidobacterium crudilactis	327277	PRJNA242599	242599	Terrabacteria group	Actinobacteria	2.36282	57.7	-	JHAL01	6	1938	1845	8/6/14	4/17/17	Contig	University of Liege	SAMN02699097	GCA_000738005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/005/GCA_000738005.1_ASM73800v1	25107967	LMG 23609
Natronobacterium gregoryi SP2	797304	PRJNA60135	60135	Euryarchaeota	Halobacteria	3.78836	62.2	chromosome:NC_019792.1/CP003377.1	-	1	3770	3588	12/10/12	4/8/17	Complete Genome	DOE Joint Genome Institute	SAMN02232042	GCA_000230715.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/715/GCA_000230715.3_ASM23071v3	-	SP2
Rhodomicrobium vannielii ATCC 17100	648757	PRJNA38253	38253	Proteobacteria	Alphaproteobacteria	4.01447	62.2	chromosome:NC_014664.1/CP002292.1	-	1	3724	3600	11/5/10	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00007427	GCA_000166055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/055/GCA_000166055.1_ASM16605v1	-	ATCC 17100
Serratia nematodiphila WCU338	1401255	PRJEB4598	221849	Proteobacteria	Gammaproteobacteria	5.12368	59.5	-	CBVO01	76	4897	4672	12/2/13	8/7/17	Scaffold	OSU/OARDC	SAMEA3146291	GCA_900005125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/005/125/GCA_900005125.1_WCU338	-	WCU338
Rhodococcus defluvii	1323361	PRJNA255084	255084	Terrabacteria group	Actinobacteria	5.13434	68.7	-	JPOC01	267	4693	4535	8/8/14	4/9/17	Contig	Northumbria University	SAMN02910065	GCA_000738775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/775/GCA_000738775.1_ASM73877v1	-	Ca11
Hoyosella subflava DQS3-9A1	443218	PRJNA63351	63351	Terrabacteria group	Actinobacteria	4.86349	62.1997	chromosome:NC_015564.1/CP002786.1; plasmid pAS9A-1:NC_015560.1/CP002787.1; plasmid pAS9A-2:NC_015561.1/CP002788.1	-	3	4550	4417	5/20/11	9/4/17	Complete Genome	"College of Engineering, Peking University"	SAMN02603151	GCA_000214175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/175/GCA_000214175.1_ASM21417v1	21725023	DQS3-9A1
Candidatus Moduliflexus flocculans	1499966	PRJDB2871	257566	unclassified Bacteria	Candidatus Moduliflexus	7.14716	50.5	-	BAYY01	8	6024	5966	8/5/14	2/7/15	Scaffold	National Institute of Advanced Industrial Science and Technology (AIST)	SAMD00016904	GCA_000739515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/515/GCA_000739515.1_ASM73951v1	25650158	-
Candidatus Vecturithrix granuli	1499967	PRJDB2872	257567	unclassified Bacteria	Candidatus Vecturithrix	8.38469	47.2	-	BAYZ01	21	7096	7048	8/5/14	2/7/15	Scaffold	National Institute of Advanced Industrial Science and Technology (AIST)	SAMD00016905	GCA_000739535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/535/GCA_000739535.1_ASM73953v1	25650158	-
Halolamina rubra	1380430	PRJDB2988	256048	Euryarchaeota	Halobacteria	2.955	69	-	BBJN01	71	3032	2761	7/31/14	4/10/17	Contig	Korea Basic Science Institute	SAMD00018743	GCA_000739555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/555/GCA_000739555.1_ASM73955v1	-	CBA1107
Halobellus rufus	1448860	PRJDB2989	256049	Euryarchaeota	Halobacteria	3.85222	64.1	-	BBJO01	81	3869	3533	7/31/14	4/9/17	Contig	Korea Basic Science Institute	SAMD00018744	GCA_000739575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/575/GCA_000739575.1_ASM73957v1	-	CBA1103
Halorubrum halophilum	413816	PRJDB2990	256050	Euryarchaeota	Halobacteria	3.67798	65.1	-	BBJP01	103	3580	3368	7/31/14	4/10/17	Contig	Korea Basic Science Institute	SAMD00018745	GCA_000739595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/595/GCA_000739595.1_ASM73959v1	-	B8
Haloferula sp. BvORR071	1396141	PRJDB1467	254383	PVC group	Verrucomicrobia	7.79513	62.5	-	BATP01	66	6423	6264	7/3/14	4/9/17	Contig	"Hokkaido Agricultural Research Center, National Agriculture and Food Research Organization."	SAMD00036766	GCA_000739615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/615/GCA_000739615.1_ASM73961v1	-	-
Tepidicaulis marinus	1333998	PRJDB2924	255694	Proteobacteria	Alphaproteobacteria	3.47574	61.1	-	BBIO01	46	3396	3279	7/16/14	4/9/17	Contig	"National Institute of Advanced Industrial Science and Technology, Japan"	SAMD00017759	GCA_000739695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/695/GCA_000739695.1_ASM73969v1	-	MA2
Falsirhodobacter sp. alg1	1472418	PRJDB2963	256224	Proteobacteria	Alphaproteobacteria	2.92197	60.3	-	BBJC02	154	2857	2713	7/25/14	4/11/17	Contig	Waseda University	SAMD00018701	GCA_000739715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/715/GCA_000739715.2_ASM73971v2	"2,514,613,827,176,710"	alg1
Vibrio diazotrophicus NBRC 103148	1348635	PRJDB1326	231383	Proteobacteria	Gammaproteobacteria	4.72175	43.4	-	BBJY01	57	4286	4155	8/2/14	4/9/17	Contig	National Institute of Technology and Evaluation	SAMD00018681	GCA_000740015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/015/GCA_000740015.1_ASM74001v1	-	NBRC 103148
Lactobacillus oryzae JCM 18671	1291743	PRJDB1101	246053	Terrabacteria group	Firmicutes	1.86039	42.8	-	BBJM01	93	1916	1783	7/31/14	4/9/17	Contig	"National Agriculture and Food Research Organization, National Institute of Livestock and Grassland Science"	SAMD00000345	GCA_000740055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/055/GCA_000740055.1_ASM74005v1	25169865	SG293
Nanohaloarchaea archaeon AB578-D14	1406378	PRJNA222265	222265	DPANN group	Candidatus Nanohaloarchaeota	1.02854	52.5	-	AYGT01	962	-	-	8/14/14	9/5/14	Contig	University of Alicante	SAMN02369553	GCA_000740075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/075/GCA_000740075.1_ASM74007v1	25119473	-
Haematobacter massiliensis	195105	PRJNA241047	241047	Proteobacteria	Alphaproteobacteria	4.12868	64.6	-	JGYG01	53	3961	3819	8/16/14	4/17/17	Contig	Huazhong Agricultural University	SAMN02687979	GCA_000740795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/795/GCA_000740795.1_ASM74079v1	-	CCUG 47968
Paenirhodobacter enshiensis	1105367	PRJNA239787	239787	Proteobacteria	Alphaproteobacteria	3.43959	66.8	-	JFZB01	112	3212	3082	8/16/14	4/9/17	Contig	Huazhong Agricultural University	SAMN02673274	GCA_000740785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/785/GCA_000740785.1_ASM74078v1	26221419	DW2-9
Haematobacter missouriensis	366616	PRJNA239788	239788	Proteobacteria	Alphaproteobacteria	3.95881	64.3	-	JFGS01	136	3789	3611	8/16/14	4/17/17	Contig	Huazhong Agricultural University	SAMN02670966	GCA_000740775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/775/GCA_000740775.1_ASM74077v1	-	CCUG 52307
Sinorhizobium meliloti	382	PRJNA388336	388336	Proteobacteria	Alphaproteobacteria	6.75079	62.196	chromosome:NZ_CP021825.1/CP021825.1; plasmid accessoryA:NZ_CP021826.1/CP021826.1; plasmid psymA:NZ_CP021827.1/CP021827.1; plasmid psymB:NZ_CP021828.1/CP021828.1	-	4	6699	6208	6/16/17	8/6/17	Complete Genome	University of Minnesota	SAMN07175161	GCA_002197105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/105/GCA_002197105.1_ASM219710v1	-	KH35c
Bifidobacterium biavatii DSM 23969	1437608	PRJNA239837	239837	Terrabacteria group	Actinobacteria	3.25215	63.1	-	JGYN01	56	2630	2421	8/18/14	4/9/17	Contig	University of Parma	SAMN02673425	GCA_000741165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/165/GCA_000741165.1_Bifbia	"2,508,549,325,107,960"	DSM 23969
Bifidobacterium callitrichos DSM 23973	1437609	PRJNA239842	239842	Terrabacteria group	Actinobacteria	2.88731	63.5	-	JGYS01	33	2425	2217	8/18/14	4/9/17	Contig	University of Parma	SAMN02673430	GCA_000741175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/175/GCA_000741175.1_Bifcal	"2,508,549,325,107,960"	DSM 23973
Bifidobacterium gallinarum	78344	PRJNA239847	239847	Terrabacteria group	Actinobacteria	2.16084	64.2	-	JGYX01	10	1798	1651	8/18/14	4/9/17	Contig	University of Parma	SAMN02673435	GCA_000741215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/215/GCA_000741215.1_Bifgalrum	"2,508,549,325,107,960"	LMG 11586
Bifidobacterium mongoliense DSM 21395	1437603	PRJNA239854	239854	Terrabacteria group	Actinobacteria	2.17049	62.8	-	JGZE01	43	1833	1674	8/18/14	4/9/17	Contig	University of Parma	SAMN02673442	GCA_000741285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/285/GCA_000741285.1_Bifmon	"2,508,549,325,107,960"	DSM 21395
Bifidobacterium pullorum	78448	PRJNA239859	239859	Terrabacteria group	Actinobacteria	2.15356	64.2	-	JGZJ01	11	1800	1559	8/18/14	4/9/17	Contig	University of Parma	SAMN02673447	GCA_000741335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/335/GCA_000741335.1_Bifpul	"2,508,549,325,107,960"	LMG 21816
Sinorhizobium americanum CCGM7	1408224	PRJNA222537	222537	Proteobacteria	Alphaproteobacteria	6.85305	62.1917	chromosome:NZ_CP013051.1/CP013051.1; plasmid A:NZ_CP013052.1/CP013052.1; plasmid B:NZ_CP013053.1/CP013053.1; plasmid C:NZ_CP013054.1/CP013054.1	-	4	6477	6070	12/5/16	4/16/17	Complete Genome	"Centro de Ciencias Genomicas, UNAM"	SAMN02370997	GCA_000705595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/595/GCA_000705595.2_ASM70559v2	-	CCGM7
Bifidobacterium saeculare DSM 6531 = LMG 14934	1437611	PRJNA239862	239862	Terrabacteria group	Actinobacteria	2.26328	63.7	-	JGZM01	14	1865	1723	8/18/14	4/9/17	Contig	University of Parma	SAMN02673450	GCA_000741375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/375/GCA_000741375.1_Bifsae	"2,508,549,325,107,960"	LMG 14934
Bifidobacterium bohemicum DSM 22767	1437606	PRJNA239839	239839	Terrabacteria group	Actinobacteria	2.05247	57.5	-	JGYP01	5	1639	1534	8/18/14	4/9/17	Contig	University of Parma	SAMN02673427	GCA_000741525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/525/GCA_000741525.1_Bifboh	"2,508,549,325,107,960"	DSM 22767
Bifidobacterium cuniculi	1688	PRJNA239845	239845	Terrabacteria group	Actinobacteria	2.53159	64.9	-	JGYV01	41	2251	2105	8/18/14	4/9/17	Contig	University of Parma	SAMN02673433	GCA_000741575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/575/GCA_000741575.1_Bifcun	"2,508,549,325,107,960"	LMG 10738
Bifidobacterium merycicum	78345	PRJNA239852	239852	Terrabacteria group	Actinobacteria	2.28023	60.3	-	JGZC01	16	1880	1710	8/18/14	4/9/17	Contig	University of Parma	SAMN02673440	GCA_000741615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/615/GCA_000741615.1_Bifmer	"2,508,549,325,107,960"	LMG 11341
Bifidobacterium stellenboschense	762211	PRJNA239865	239865	Terrabacteria group	Actinobacteria	2.81286	65.3	-	JGZP01	40	2277	2102	8/18/14	4/17/17	Contig	University of Parma	SAMN02673453	GCA_000741785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/785/GCA_000741785.1_Bifste	"2,508,549,325,107,960"	DSM 23968
Candidatus Hepatobacter penaei	1274402	PRJNA255047	255047	Proteobacteria	Alphaproteobacteria	1.11561	49.8	-	JQAJ01	5	1131	1069	8/20/14	4/10/17	Scaffold	University of Virginia	SAMN02996437	GCA_000742475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/475/GCA_000742475.1_ASM74247v1	-	NHPB
Sinorhizobium meliloti 2011	1286640	PRJNA187276	187276	Proteobacteria	Alphaproteobacteria	6.69318	62.1598	chromosome:NC_020528.1/CP004140.1; plasmid pSymA:NC_020527.1/CP004138.1; plasmid pSymB:NC_020560.1/CP004139.1	-	3	6656	6333	3/8/13	5/19/17	Complete Genome	LIPM-INRA/CNRS	SAMN02603522	GCA_000346065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/065/GCA_000346065.1_ASM34606v1	23599422	2011
Sinorhizobium meliloti 1021	266834	PRJNA19	19	Proteobacteria	Alphaproteobacteria	6.69169	62.1591	chromosome:NC_003047.1/AL591688.1; plasmid pSymA:NC_003037.1/AE006469.1; plasmid pSymB:NC_003078.1/AL591985.1	-	3	6292	6218	10/5/01	7/27/17	Complete Genome	MELILO	SAMEA3283068	GCA_000006965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/006/965/GCA_000006965.1_ASM696v1	"1,147,410,411,481,430"	1021
Arenimonas donghaensis DSM 18148 = HO3-R19	1121014	PRJNA214575	214575	Proteobacteria	Gammaproteobacteria	2.97706	68.7	-	AVCJ01	51	2757	2652	8/25/14	4/17/17	Contig	Huazhong Agricultural University	SAMN03004373	GCA_000743535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/535/GCA_000743535.1_ASM74353v1	26380644	HO3-R19
Devosia riboflavina	46914	PRJNA258072	258072	Proteobacteria	Alphaproteobacteria	5.05223	61.8	-	JQGC01	113	4953	4814	8/25/14	4/17/17	Contig	Agriculture and Agri-Food Canada	SAMN02983206	GCA_000743575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/575/GCA_000743575.1_ASM74357v1	25278537	IFO13584
Ruegeria halocynthiae	985054	PRJNA258451	258451	Proteobacteria	Alphaproteobacteria	4.3145	58.3	-	JQEZ01	19	4219	4071	8/26/14	4/9/17	Contig	UPMC Observatoire de Banyuls	SAMN02997979	GCA_000743705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/705/GCA_000743705.1_ASM74370v1	25301648	MOLA R1/13b
Maribius sp. MOLA 401	1530186	PRJNA257272	257272	Proteobacteria	Alphaproteobacteria	3.84977	67.7	-	JQEY01	33	3787	3516	8/26/14	4/9/17	Contig	UPMC - Banyuls Observatory	SAMN02997978	GCA_000743715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/715/GCA_000743715.1_ASM74371v1	25278539	MOLA 401
Acetobacter malorum	178901	PRJNA252099	252099	Proteobacteria	Alphaproteobacteria	3.51343	56.5	-	JOJU01	76	3062	2937	8/26/14	4/9/17	Contig	Cornell University	SAMN02849420	GCA_000743885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/885/GCA_000743885.1_ASM74388v1	-	DmCS_005
Bifidobacterium reuteri DSM 23975	1437610	PRJNA239860	239860	Terrabacteria group	Actinobacteria	2.84757	60.5	-	JGZK01	28	2252	2061	8/18/14	4/9/17	Contig	University of Parma	SAMN02673448	GCA_000741695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/695/GCA_000741695.1_Bifreu	"2,508,549,325,107,960"	DSM 23975
Bifidobacterium psychraerophilum	218140	PRJNA239858	239858	Terrabacteria group	Actinobacteria	2.61508	58.8	-	JGZI01	11	2170	2081	8/18/14	4/9/17	Contig	University of Parma	SAMN02673446	GCA_000741705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/705/GCA_000741705.1_Bifpsy	"2,508,549,325,107,960"	LMG 21775
Bifidobacterium saguini DSM 23967	1437607	PRJNA239863	239863	Terrabacteria group	Actinobacteria	2.78704	56.4	-	JGZN01	33	2367	2178	8/18/14	4/9/17	Contig	University of Parma	SAMN02673451	GCA_000741715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/715/GCA_000741715.1_Bifsag	"2,508,549,325,107,960"	DSM 23967
'Chrysanthemum coronarium' phytoplasma	1520703	PRJDB2922	258201	Terrabacteria group	Tenericutes	0.739592	27.5	-	BBIY01	170	821	651	8/13/14	4/9/17	Contig	National Institute of Advanced Industrial Science and Technology (AIST)	SAMD00018609	GCA_000744065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/065/GCA_000744065.1_ASM74406v1	25291766	OY-V
Carnobacterium alterfunditum DSM 5972	1449335	PRJNA234910	234910	Terrabacteria group	Firmicutes	2.61687	36	-	JQLG01	7	2471	2320	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02786972	GCA_000744115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/115/GCA_000744115.1_ASM74411v1	-	pf4
Maribacter forsetii DSM 18668	1392498	PRJNA217215	217215	FCB group	Bacteroidetes/Chlorobi group	4.51437	35.2	-	JQLH01	1	3905	3783	8/28/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02745580	GCA_000744105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/105/GCA_000744105.1_ASM74410v1	-	DSM 18668
Carnobacterium funditum DSM 5970	1449337	PRJNA234916	234916	Terrabacteria group	Firmicutes	2.35244	34.6	-	JQLL01	2	2210	2035	8/28/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02787086	GCA_000744185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/185/GCA_000744185.1_ASM74418v1	-	pf3
Kitasatospora mediocidica KCTC 9733	1449347	PRJNA234781	234781	Terrabacteria group	Actinobacteria	8.68176	71.9	-	JQLN01	7	7480	7118	8/28/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02745411	GCA_000744225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/225/GCA_000744225.1_ASM74422v1	-	KCTC 9733
Carnobacterium divergens DSM 20623	1449336	PRJNA234908	234908	Terrabacteria group	Firmicutes	2.61922	35.1	-	JQLO01	1	2507	2388	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02787004	GCA_000744255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/255/GCA_000744255.1_ASM74425v1	-	66
Carnobacterium pleistocenium FTR1	1449343	PRJNA235042	235042	Terrabacteria group	Firmicutes	2.66262	35.4	-	JQLQ01	4	2613	2470	8/28/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02745564	GCA_000744285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/285/GCA_000744285.1_ASM74428v1	-	FTR1
Methanosarcina soligelidi	1036677	PRJNA210206	210206	Euryarchaeota	Methanomicrobia	4.0645	41.5	-	JQLR01	1	3474	3257	8/28/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02745719	GCA_000744315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/315/GCA_000744315.1_ASM74431v1	25908125	SMA-21
Carnobacterium gallinarum DSM 4847	1449338	PRJNA234917	234917	Terrabacteria group	Firmicutes	4.04143	34.3	-	JQLU01	5	3814	3651	8/28/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02787090	GCA_000744375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/375/GCA_000744375.1_ASM74437v1	-	MT44
Zetaproteobacteria bacterium TAG-1	1485545	PRJNA243965	243965	Proteobacteria	Zetaproteobacteria	2.16355	42.7	-	JQLW01	13	2200	2114	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02745185	GCA_000744415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/415/GCA_000744415.1_ASM74441v1	-	TAG-1
Hippea jasoniae	944479	PRJNA245742	245742	Proteobacteria	delta/epsilon subdivisions	1.71478	37	-	JQLX01	18	1761	1684	8/28/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02745989	GCA_000744435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/435/GCA_000744435.1_ASM74443v1	-	Mar08-272r
Caulobacter henricii	69395	PRJNA247550	247550	Proteobacteria	Alphaproteobacteria	5.9945	69	-	JQJN01	57	5393	5237	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02787120	GCA_000745545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/545/GCA_000745545.1_ASM74554v1	-	CF287
Rhizobium alamii	492774	PRJNA247576	247576	Proteobacteria	Alphaproteobacteria	7.31551	60.1	-	JQMB01	33	7053	6870	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02787137	GCA_000744505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/505/GCA_000744505.1_ASM74450v1	-	YR540
Zobellia uliginosa	143224	PRJNA248513	248513	FCB group	Bacteroidetes/Chlorobi group	5.358	38.1	-	JQMD01	2	4339	4238	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02799635	GCA_000744555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/555/GCA_000744555.1_ASM74455v1	-	MAR_2009_138
Porticoccus hydrocarbonoclasticus MCTG13d	1415778	PRJNA225848	225848	Proteobacteria	Gammaproteobacteria	2.47465	53.1	-	JQMM01	1	2360	2301	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02744760	GCA_000744735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/735/GCA_000744735.1_ASM74473v1	26089431	MCTG13d
Streptacidiphilus albus JL83	1449352	PRJNA234786	234786	Terrabacteria group	Actinobacteria	9.91509	71.8	-	JQML01	1	8720	8240	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02745413	GCA_000744705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/705/GCA_000744705.1_ASM74470v1	-	JL83
Kitasatospora azatica KCTC 9699	1449346	PRJNA234862	234862	Terrabacteria group	Actinobacteria	8.2723	71.6	-	JQMO01	3	7242	6844	8/28/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02745392	GCA_000744785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/785/GCA_000744785.1_ASM74478v1	-	KCTC 9699
Thermorudis peleae	1382356	PRJNA214287	214287	Terrabacteria group	Chloroflexi	2.93462	59.9	-	JQMP01	4	2666	2583	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02744724	GCA_000744775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/775/GCA_000744775.1_ASM74477v1	-	KI4
Streptacidiphilus oryzae TH49	1449353	PRJNA234788	234788	Terrabacteria group	Actinobacteria	7.80654	73.4	-	JQMQ01	6	6908	6547	8/28/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02745412	GCA_000744815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/815/GCA_000744815.1_ASM74481v1	26112795	TH49
Carnobacterium mobile DSM 4848	1449342	PRJNA234873	234873	Terrabacteria group	Firmicutes	2.63287	36.8	-	JQMR01	6	2525	2349	8/28/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02786959	GCA_000744825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/825/GCA_000744825.1_ASM74482v1	-	MT37L
Luteibacter sp. 9135	1500893	PRJNA247911	247911	Proteobacteria	Gammaproteobacteria	4.48527	66.2	-	JQNB01	1	3845	3718	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02786965	GCA_000745005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/005/GCA_000745005.1_ASM74500v1	-	9135
Thermus caliditerrae	1330700	PRJNA245592	245592	Terrabacteria group	Deinococcus-Thermus	2.21811	67.2	-	JQNC01	4	2319	2196	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02745159	GCA_000745065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/065/GCA_000745065.1_ASM74506v1	27125486	YIM 77777
Rhizobiales bacterium YIM 77505	1411123	PRJNA245578	245578	Proteobacteria	Alphaproteobacteria	4.1913	67.3	-	JQNH01	1	4005	3855	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02745209	GCA_000745135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/135/GCA_000745135.1_ASM74513v1	-	YIM 77505
Muricauda sp. MAR_2010_75	1250232	PRJNA248521	248521	FCB group	Bacteroidetes/Chlorobi group	4.4247	42	-	JQNJ01	1	3981	3888	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02799619	GCA_000745185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/185/GCA_000745185.1_ASM74518v1	-	MAR_2010_75
Streptomyces yeochonensis CN732	1449355	PRJNA234789	234789	Terrabacteria group	Actinobacteria	7.81939	73.6	-	JQNR01	6	6438	5894	8/28/14	3/11/17	Contig	DOE Joint Genome Institute	SAMN02745173	GCA_000745345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/345/GCA_000745345.1_ASM74534v1	-	CN732
Sinorhizobium meliloti	382	PRJNA388336	388336	Proteobacteria	Alphaproteobacteria	6.71623	62.1579	chromosome:NZ_CP021797.1/CP021797.1; plasmid psymA:NZ_CP021798.1/CP021798.1; plasmid psymB:NZ_CP021799.1/CP021799.1	-	3	6663	6292	6/16/17	8/6/17	Complete Genome	University of Minnesota	SAMN07175168	GCA_002197065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/065/GCA_002197065.1_ASM219706v1	-	USDA1106
Deinococcus misasensis DSM 22328	1121382	PRJNA221042	221042	Terrabacteria group	Deinococcus-Thermus	5.07829	55.2	-	JQKG01	100	4991	4810	8/28/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02746038	GCA_000745915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/915/GCA_000745915.1_ASM74591v1	-	DSM 22328
Alysiella crassa DSM 2578	1120980	PRJNA221009	221009	Proteobacteria	Betaproteobacteria	2.76203	45.3	-	JQKH01	157	2730	2542	8/28/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02746063	GCA_000745955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/955/GCA_000745955.1_ASM74595v1	-	DSM 2578
Edaphobacter aggregans DSM 19364	1121860	PRJNA221034	221034	Acidobacteria	Acidobacteriia	8.17713	58.7	-	JQKI01	345	7278	6596	8/28/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02746092	GCA_000745965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/965/GCA_000745965.1_ASM74596v1	-	DSM 19364
Desulfobacter vibrioformis DSM 8776	1121398	PRJNA221037	221037	Proteobacteria	delta/epsilon subdivisions	4.46678	48.6	-	JQKJ01	86	4024	3846	8/28/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02691716	GCA_000745975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/975/GCA_000745975.1_ASM74597v1	-	DSM 8776
Lachnospiraceae bacterium MA2020	1408323	PRJNA223040	223040	Terrabacteria group	Firmicutes	3.72472	39.9	-	JQKK01	49	3369	3220	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02744718	GCA_000746015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/015/GCA_000746015.1_ASM74601v1	-	MA2020
Clostridiales bacterium DRI-13	1449126	PRJNA234897	234897	Terrabacteria group	Firmicutes	3.64967	45.1	-	JQKL01	105	3719	3528	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02745515	GCA_000746025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/025/GCA_000746025.1_ASM74602v1	-	DRI-13
Methanobacterium arcticum	386456	PRJNA245621	245621	Euryarchaeota	Methanobacteria	3.39392	33.2	-	JQKN01	35	3273	3174	8/28/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02910397	GCA_000746075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/075/GCA_000746075.1_ASM74607v1	-	M2
Ferriphaselus sp. R-1	1485544	PRJNA243963	243963	Proteobacteria	Betaproteobacteria	2.4416	60.7	-	JQKP01	23	2437	2320	8/28/14	6/20/17	Scaffold	DOE Joint Genome Institute	SAMN02745141	GCA_000746095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/095/GCA_000746095.1_ASM74609v1	26617599	R-1
Methylocapsa aurea	663610	PRJNA243940	243940	Proteobacteria	Alphaproteobacteria	3.97125	61.3	-	JQKO01	34	3699	3551	8/28/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02746022	GCA_000746085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/085/GCA_000746085.1_ASM74608v1	-	KYG T
Thermodesulfobacterium hydrogeniphilum	161156	PRJNA239492	239492	Thermodesulfobacteria	Thermodesulfobacteria	1.68724	30.4	-	JQKW01	13	1709	1624	8/28/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02744824	GCA_000746255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/255/GCA_000746255.1_ASM74625v1	-	DSM 14290
Thermopetrobacter sp. TC1	1495045	PRJNA245741	245741	Proteobacteria	Alphaproteobacteria	2.60892	62	-	JQKX01	19	2274	2172	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02746018	GCA_000746275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/275/GCA_000746275.1_ASM74627v1	-	TC-1
Sinorhizobium meliloti	382	PRJNA388336	388336	Proteobacteria	Alphaproteobacteria	6.80819	62.1459	chromosome:NZ_CP021818.1/CP021818.1; plasmid accessoryA:NZ_CP021821.1/CP021821.1; plasmid psymA:NZ_CP021819.1/CP021819.1; plasmid psymB:NZ_CP021820.1/CP021820.1	-	4	6809	6233	6/16/17	8/6/17	Complete Genome	University of Minnesota	SAMN07175163	GCA_002197125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/125/GCA_002197125.1_ASM219712v1	-	M162
Sinorhizobium fredii CCBAU 83666	1128334	PRJNA353922	353922	Proteobacteria	Alphaproteobacteria	7.08339	62.138	chromosome:NZ_CP023070.1/CP023070.1; plasmid pSF83666a:NZ_CP023072.1/CP023072.1; plasmid pSF83666b:NZ_CP023071.1/CP023071.1; plasmid pSF83666d:NZ_CP023073.1/CP023073.1	-	4	6940	6304	9/8/17	9/11/17	Complete Genome	China Agricultural University	SAMN07445561	GCA_002288485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/485/GCA_002288485.1_ASM228848v1	-	CCBAU 83666
Sinorhizobium meliloti	382	PRJNA388336	388336	Proteobacteria	Alphaproteobacteria	6.99772	62.1138	chromosome:NZ_CP021829.1/CP021829.1; plasmid accessoryA:NZ_CP021832.1/CP021832.1; plasmid psymA:NZ_CP021830.1/CP021830.1; plasmid psymB:NZ_CP021831.1/CP021831.1	-	4	7005	6446	6/16/17	8/7/17	Complete Genome	University of Minnesota	SAMN07175160	GCA_002197165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/165/GCA_002197165.1_ASM219716v1	-	HM006
Methylobacter whittenburyi	39770	PRJNA252872	252872	Proteobacteria	Gammaproteobacteria	5.44016	52	-	JQNS01	7	4970	4769	8/28/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02865414	GCA_000745375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/375/GCA_000745375.1_ASM74537v1	-	UCM-B-3033
Beijerinckia mobilis	231434	PRJNA243941	243941	Proteobacteria	Alphaproteobacteria	4.32054	57.2	-	JQJH01	57	3829	3680	8/28/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02910383	GCA_000745425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/425/GCA_000745425.1_ASM74542v1	-	UQM 1969
Mesoaciditoga lauensis cd-1655R = DSM 25116	1150474	PRJNA245743	245743	Thermotogae	Thermotogae	2.17247	39.9	-	JQJI01	65	2104	1993	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02746016	GCA_000745455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/455/GCA_000745455.1_ASM74545v1	-	DSM 25116
Methanobacterium veterum	408577	PRJNA245623	245623	Euryarchaeota	Methanobacteria	3.36956	33.2	-	JQJK01	13	3249	3156	8/28/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02910304	GCA_000745485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/485/GCA_000745485.1_ASM74548v1	-	MK4
Streptomyces atratus	1893	PRJNA247516	247516	Terrabacteria group	Actinobacteria	7.30821	69.8	-	JQJU01	88	6739	6078	8/28/14	3/11/17	Scaffold	DOE Joint Genome Institute	SAMN02787147	GCA_000745675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/675/GCA_000745675.1_ASM74567v1	-	OK008
Sinorhizobium meliloti	382	PRJNA388336	388336	Proteobacteria	Alphaproteobacteria	6.98113	62.1014	chromosome:NZ_CP021822.1/CP021822.1; plasmid psymA:NZ_CP021824.1/CP021824.1; plasmid psymB:NZ_CP021823.1/CP021823.1	-	3	6998	6506	6/16/17	8/7/17	Complete Genome	University of Minnesota	SAMN07175162	GCA_002197465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/465/GCA_002197465.1_ASM219746v1	-	KH46
Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933	398512	PRJNA290984	290984	Terrabacteria group	Firmicutes	6.87882	35.6	-	LGTC01	1	5792	5462	8/6/15	4/10/17	Contig	Oak Ridge National Lab	SAMN03938399	GCA_001262605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/605/GCA_001262605.1_ASM126260v1	26404597	DSM 2933
Belnapia moabensis DSM 16746	1121106	PRJNA246205	246205	Proteobacteria	Alphaproteobacteria	6.72709	68.9	-	JQKB01	282	6375	5842	8/28/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02745942	GCA_000745835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/835/GCA_000745835.1_ASM74583v1	-	DSM 16746
Xenophilus azovorans DSM 13620	1123504	PRJNA221063	221063	Proteobacteria	Betaproteobacteria	6.53517	69.8	-	JQKD01	132	6308	6053	8/28/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02745804	GCA_000745855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/855/GCA_000745855.1_ASM74585v1	-	DSM 13620
Stenoxybacter acetivorans DSM 19021	1123296	PRJNA221055	221055	Proteobacteria	Betaproteobacteria	2.60958	45.6	-	JQKE01	143	2490	2275	8/28/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02745853	GCA_000745895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/895/GCA_000745895.1_ASM74589v1	-	DSM 19021
Ferrimicrobium acidiphilum DSM 19497	1121877	PRJNA221038	221038	Terrabacteria group	Actinobacteria	2.92889	55.3	-	JQKF01	109	2764	2600	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02745886	GCA_000745905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/905/GCA_000745905.1_ASM74590v1	-	DSM 19497
Janthinobacterium svalbardensis	368607	PRJNA407061	407061	Proteobacteria	Betaproteobacteria	6.27408	62.1	chromosome:CP023422.1	-	1	5585	5360	9/21/17	9/21/17	Complete Genome	Korea Polar Research Institute	SAMN07638148	GCA_002327145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/145/GCA_002327145.1_ASM232714v1	-	PAMC 27463
Altibacter lentus	1223410	PRJNA258116	258116	FCB group	Bacteroidetes/Chlorobi group	3.16003	42.1	-	JPZT01	13	2970	2891	9/2/14	4/17/17	Scaffold	Xiamen University	SAMN02988278	GCA_000746845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/845/GCA_000746845.1_ASM74684v1	25342673	JL2010
Paenibacillus macerans	44252	PRJNA243589	243589	Terrabacteria group	Firmicutes	7.33775	52.6	-	JMQA01	1	6561	6214	9/2/14	4/10/17	Scaffold	Los Alamos National Laboratory	SAMN02739344	GCA_000746875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/875/GCA_000746875.1_BMM_2	25301645	8244
Olsenella sp. oral taxon 807	712411	PRJNA282954	282954	Terrabacteria group	Actinobacteria	3.21359	62.1	chromosome:NZ_CP012069.2/CP012069.2	-	1	2793	2683	7/31/15	4/16/17	Complete Genome	The Forsyth Institute	SAMN03785053	GCA_001189515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/515/GCA_001189515.2_ASM118951v2	-	F0089
Sulfuricurvum sp. MLSB	1537917	PRJNA258484	258484	Proteobacteria	delta/epsilon subdivisions	2.10739	49.1	-	JQGL01	148	2064	2005	9/2/14	10/30/14	Scaffold	Hydrocarbon Metagenomic Project	SAMN02998127	GCA_000747095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/095/GCA_000747095.1_ASM74709v1	25323712	-
Amycolatopsis lurida	31959	PRJEB16419	349364	Terrabacteria group	Actinobacteria	9.04723	68.7	-	FNTA01	4	8413	8148	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04489729	GCA_900105055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/055/GCA_900105055.1_IMG-taxon_2634166339_annotated_assembly	-	DSM 43134
alpha proteobacterium QL1	1502488	PRJNA245217	245217	Proteobacteria	Alphaproteobacteria	0.952704	31.4	-	JPLS01	99	993	393	9/8/14	11/13/14	Contig	Univeristy of Illinois at Urbana-Champaign	SAMN02798134	GCA_000750175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/175/GCA_000750175.1_ASM75017v1	25377713	-
Criblamydia sequanensis CRIB-18	1437425	PRJEB5047	258618	PVC group	Chlamydiae	2.9696	38.2	-	CCEJ01	23	2497	2422	9/6/14	3/22/17	Contig	CHUV-UNIL	SAMEA3139101	GCA_000750955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/955/GCA_000750955.1_CS_CRIB18-1	-	CRIB-18
Rickettsia tamurae	334545	PRJEB6744	255704	Proteobacteria	Alphaproteobacteria	1.45322	32.5	-	CCMG01	27	1700	1297	8/6/14	4/17/17	Contig	URMITE	SAMEA2658108	GCA_000751075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/075/GCA_000751075.1_Rickettsia_tamurae_AT-1	-	-
bacterium YEK0313	1522316	PRJEB6783	256156	unclassified Bacteria	unclassified Bacteria (miscellaneous)	7.42897	68.4	-	CCMO01	419	-	-	8/15/14	9/30/15	Contig	URMITE	SAMEA2663723	GCA_000751295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/295/GCA_000751295.1_Rasbobacterium_massiliensis	-	-
Chlamydia sp. 2742-308	1806891	PRJNA312988	312988	PVC group	Chlamydiae	1.12074	38.4585	chromosome:NZ_CP014639.1/CP014639.1; plasmid unnamed:NZ_CP014640.1/CP014640.1	-	2	993	940	6/1/16	4/12/17	Chromosome	University of the Sunshine Coast	SAMN04510831	GCA_001653975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/975/GCA_001653975.1_ASM165397v1	-	2742-308
Anaerosalibacter sp. Marseille-P3206	1871005	PRJEB18747	359776	Terrabacteria group	Firmicutes	2.49832	30.7	-	FUHM01	2	2466	2359	2/8/17	4/17/17	Contig	URMITE	SAMEA47419168	GCA_900155565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/565/GCA_900155565.1_PRJEB18747	-	Marseille-P3206
Weeksella sp. HMSC059D05	1715139	PRJNA296267	296267	FCB group	Bacteroidetes/Chlorobi group	2.27527	35.8	-	LTJE01	39	2147	2061	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477527	GCA_001809725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/725/GCA_001809725.1_ASM180972v1	-	HMSC059D05
Bacillus thermoamylovorans	35841	PRJEB6526	258145	Terrabacteria group	Firmicutes	3.70707	37.3	-	CCRF01	106	3523	3323	9/6/14	4/9/17	Contig	CEBITEC	SAMEA2674878	GCA_000751775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/775/GCA_000751775.1_A1A	-	1A1
Thermoactinomyces sp. Gus2-1	1535750	PRJNA258247	258247	Terrabacteria group	Firmicutes	2.62331	48	-	JPZM01	92	2793	2570	9/10/14	4/10/17	Contig	THE INSTITUTE OF CYTOLOGY AND GENETICS	SAMN02991091	GCA_000753855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/855/GCA_000753855.1_ASM75385v1	-	Gus2-1
Necropsobacter rosorum	908285	PRJEB6880	256952	Proteobacteria	Gammaproteobacteria	2.52569	48.9	-	CCMQ01	48	2397	2285	9/2/14	4/17/17	Contig	URMITE	SAMEA2672871	GCA_000751835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/835/GCA_000751835.1_Necropsobacter_rosorum	-	-
bacterium LF-3	1504823	PRJEB6481	251838	unclassified Bacteria	unclassified Bacteria (miscellaneous)	2.93114	29.8	-	CCMM01	13	2971	2793	8/16/14	4/9/17	Contig	URMITE	SAMEA2663725	GCA_000752095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/095/GCA_000752095.1_Guyana_massiliensis	-	-
bacterium MS4	1120746	PRJEB6469	251836	unclassified Bacteria	unclassified Bacteria (miscellaneous)	3.73772	51.3	-	CCFG01	17	3603	3493	9/5/14	4/9/17	Contig	URMITE	SAMEA2602734	GCA_000752215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/215/GCA_000752215.1_Amazonia_massiliensis	-	-
Pectobacterium betavasculorum	55207	PRJNA258505	258505	Proteobacteria	Gammaproteobacteria	4.68521	51.2	-	JQHM01	93	4306	4070	9/8/14	4/9/17	Contig	Food and Environment Research Agency	SAMN02999474	GCA_000749845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/845/GCA_000749845.1_ASM74984v1	-	NCPPB 2795
bacterium OL-1	1504822	PRJEB6476	251850	unclassified Bacteria	unclassified Bacteria (miscellaneous)	2.45358	62.7	-	CCNO01	16	2202	2091	8/22/14	4/9/17	Contig	URMITE	SAMEA2697683	GCA_000752675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/675/GCA_000752675.1_Jeddahella_massiliensis	-	-
Rickettsia aeschlimannii	45262	PRJEB6087	244396	Proteobacteria	Alphaproteobacteria	1.3122	32.2	-	CCER01	16	1559	1125	6/23/14	4/17/17	Contig	URMITE	SAMEA2501490	GCA_001051325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/325/GCA_001051325.1_Rickettsia_aeschlimannii	-	-
Candidatus Izimaplasma sp. HR2	1541960	PRJNA259563	259563	Terrabacteria group	Tenericutes	2.11562	29.2	-	JRFF01	78	2284	2222	9/9/14	9/9/14	Scaffold	California Institute of Technology	SAMN03009493	GCA_000753575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/575/GCA_000753575.1_IPHR2v1	-	-
Idiomarina salinarum	435908	PRJNA253871	253871	Proteobacteria	Gammaproteobacteria	2.48028	53	-	JPER01	17	2367	2300	9/9/14	4/17/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02897942	GCA_000753715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/715/GCA_000753715.1_ASM75371v1	-	ISL-52
Martelella endophytica	1486262	PRJNA272964	272964	Proteobacteria	Alphaproteobacteria	4.81733	62.1	chromosome:NZ_CP010803.1/CP010803.1	-	1	4526	4393	3/24/15	4/10/17	Complete Genome	Gyeonsang National university	SAMN03284753	GCA_000960975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/975/GCA_000960975.1_ASM96097v1	25953177	YC6887
Acidihalobacter prosperus	160660	PRJNA258228	258228	Proteobacteria	Gammaproteobacteria	3.35968	64.4	-	JQSG02	8	3249	3156	9/11/14	4/13/17	Contig	Fundacion Ciencia & Vida	SAMN02990926	GCA_000754095.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/095/GCA_000754095.2_ASM75409v2	25342676	DSM 5130
Vibrio ponticus	265668	PRJNA343920	343920	Proteobacteria	Gammaproteobacteria	4.74797	44.8	-	MJMI01	164	4200	4069	1/9/17	4/16/17	Contig	"CIAD, A.C."	SAMN05804971	GCA_001939685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/685/GCA_001939685.1_ASM193968v1	-	CAIM 1731
Methanoculleus marisnigri JR1	368407	PRJNA16330	16330	Euryarchaeota	Methanomicrobia	2.4781	62.1	chromosome:NC_009051.1/CP000562.1	-	1	2511	2430	2/16/07	4/6/17	Complete Genome	DOE Joint Genome Institute	SAMN02598365	GCA_000015825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/825/GCA_000015825.1_ASM1582v1	21304656	JR1
Komagataeibacter xylinus E25	1296990	PRJNA190024	190024	Proteobacteria	Alphaproteobacteria	3.90508	62.0911	chromosome:NZ_CP004360.1/CP004360.1; plasmid pGX1:NZ_CP004361.1/CP004361.1; plasmid pGX2:NZ_CP004362.1/CP004362.1; plasmid pGX3:NZ_CP004363.1/CP004363.1; plasmid pGX4:NZ_CP004364.1/CP004364.1; plasmid pGX5:NZ_CP004365.1/CP004365.1	-	6	3678	3362	2/5/14	9/10/17	Complete Genome	Genomed SA	SAMN03081456	GCA_000550765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/765/GCA_000550765.1_ASM55076v1	-	E25
Tatumella morbirosei	642227	PRJNA252994	252994	Proteobacteria	Gammaproteobacteria	4.4134	49.9981	plasmid pTmo1:NZ_CM003276.1/CM003276.1	JPKR02	6	4150	3901	9/23/14	4/17/17	Contig	University of Pretoria	SAMN02905535	GCA_000757425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/425/GCA_000757425.2_Tmorbiroseiassem5	-	LMG 23360
Achromobacter sp. MFA1 R4	1881016	PRJEB18832	360752	Proteobacteria	Betaproteobacteria	6.22733	66.6	chromosome I:NZ_LT707065.1/LT707065.1	-	1	5679	5554	1/14/17	4/17/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05428937	GCA_900156745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/745/GCA_900156745.1_IMG-taxon_2681813522_annotated_assembly	-	MFA1 R4
actinobacterium acAMD-5	1504319	PRJNA238866	238866	Terrabacteria group	Actinobacteria	1.24202	44.4	-	JNSF01	10	1259	1259	9/12/14	2/18/15	Contig	Evolutionary Genomics Group (UMH-EGG)	SAMN02808668	GCA_000754425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/425/GCA_000754425.1_ASM75442v1	25355242	-
actinobacterium acAMD-2	1504318	PRJNA238866	238866	Terrabacteria group	Actinobacteria	0.973534	57.3	-	JNSE01	37	965	965	9/12/14	2/18/15	Contig	Evolutionary Genomics Group (UMH-EGG)	SAMN02808402	GCA_000754455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/455/GCA_000754455.1_ASM75445v1	25355242	-
actinobacterium acMicro-1	1504316	PRJNA238866	238866	Terrabacteria group	Actinobacteria	0.856461	61.6	-	JNSC01	36	873	873	9/12/14	2/18/15	Contig	Evolutionary Genomics Group (UMH-EGG)	SAMN02808400	GCA_000754435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/435/GCA_000754435.1_ASM75443v1	25355242	-
actinobacterium acMicro-4	1504317	PRJNA238866	238866	Terrabacteria group	Actinobacteria	1.08365	59.3	-	JNSD01	15	1114	1114	9/12/14	2/18/15	Contig	Evolutionary Genomics Group (UMH-EGG)	SAMN02808401	GCA_000754445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/445/GCA_000754445.1_ASM75444v1	25355242	-
actinobacterium acIB-AMD-6	1504321	PRJNA238866	238866	Terrabacteria group	Actinobacteria	0.523138	42.1	-	JNSH01	31	551	551	9/12/14	2/18/15	Contig	Evolutionary Genomics Group (UMH-EGG)	SAMN02808670	GCA_000754505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/505/GCA_000754505.1_ASM75450v1	25355242	-
actinobacterium acAcidi	1504320	PRJNA238866	238866	Terrabacteria group	Actinobacteria	2.69066	52.2	-	JNSG01	132	2884	2884	9/12/14	2/18/15	Contig	Evolutionary Genomics Group (UMH-EGG)	SAMN02808669	GCA_000754585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/585/GCA_000754585.1_ASM75458v1	25355242	-
actinobacterium acIB-AMD-7	1504322	PRJNA238866	238866	Terrabacteria group	Actinobacteria	0.974884	40.4	-	JNSI01	66	1004	1004	9/12/14	2/18/15	Contig	Evolutionary Genomics Group (UMH-EGG)	SAMN02808671	GCA_000754605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/605/GCA_000754605.1_ASM75460v1	25355242	-
Sinorhizobium meliloti	382	PRJNA388336	388336	Proteobacteria	Alphaproteobacteria	7.14024	62.0631	chromosome:NZ_CP021808.1/CP021808.1; plasmid accessoryA:NZ_CP021811.1/CP021811.1; plasmid psymA:NZ_CP021809.1/CP021809.1; plasmid psymB:NZ_CP021810.1/CP021810.1	-	4	7164	6650	6/16/17	8/7/17	Complete Genome	University of Minnesota	SAMN07175165	GCA_002197045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/045/GCA_002197045.1_ASM219704v1	-	Rm41
Halapricum salinum	1457250	PRJDB3110	260689	Euryarchaeota	Halobacteria	3.45149	63.7	-	BBMO01	3	3389	3309	9/11/14	3/22/17	Contig	Korea Basic Science Institute	SAMD00019894	GCA_000755225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/225/GCA_000755225.1_ASM75522v1	-	CBA1105
Halococcus sediminicola	1264579	PRJDB3111	260690	Euryarchaeota	Halobacteria	3.76437	62.3	-	BBMP01	27	3802	3559	9/11/14	3/22/17	Contig	Korea Basic Science Institute	SAMD00019895	GCA_000755245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/245/GCA_000755245.1_ASM75524v1	-	CBA1101
Sinorhizobium meliloti SM11	707241	PRJNA41117	41117	Proteobacteria	Alphaproteobacteria	7.17374	62.0625	chromosome:NC_017325.1/CP001830.1; plasmid pSmeSM11c:NC_017327.1/CP001831.1; plasmid pSmeSM11d:NC_017326.1/CP001832.1	-	3	7327	6786	6/14/11	5/19/17	Complete Genome	"CeBiTec, Bielefeld University"	SAMN02603056	GCA_000218265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/265/GCA_000218265.1_ASM21826v1	21396969	SM11
Photobacterium aphoticum	754436	PRJNA242743	242743	Proteobacteria	Gammaproteobacteria	5.26618	49.7	-	LDOV01	121	4621	4486	6/18/15	4/10/17	Contig	Technical University of Denmark	SAMN03702598	GCA_001029435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/435/GCA_001029435.1_ASM102943v1	-	DSM 25995
Vibrio maritimus	990268	PRJDB1707	245981	Proteobacteria	Gammaproteobacteria	5.72647	46.1	-	BBMR01	40	5505	3746	9/12/14	4/9/17	Contig	The University of Tokyo	SAMD00017307	GCA_000755385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/385/GCA_000755385.1_ASM75538v1	-	JCM 19235
Sinorhizobium meliloti	382	PRJNA388336	388336	Proteobacteria	Alphaproteobacteria	7.14794	62.0537	chromosome:NZ_CP021800.1/CP021800.1; plasmid accessoryA:NZ_CP021803.1/CP021803.1; plasmid psymA:NZ_CP021801.1/CP021801.1; plasmid psymB:NZ_CP021802.1/CP021802.1	-	4	7216	6631	6/16/17	8/7/17	Complete Genome	University of Minnesota	SAMN07175167	GCA_002197445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/445/GCA_002197445.1_ASM219744v1	-	USDA1021
Arenimonas malthae CC-JY-1	1384054	PRJNA214577	214577	Proteobacteria	Gammaproteobacteria	3.11408	70.2	-	AVCH01	221	2966	2768	9/2/14	4/17/17	Contig	Huazhong Agricultural University	SAMN03015223	GCA_000747075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/075/GCA_000747075.1_ASM74707v1	-	CC-JY-1
Arenimonas metalli CF5-1	1384056	PRJNA214574	214574	Proteobacteria	Gammaproteobacteria	3.05662	69.9	-	AVCK01	65	2827	2727	9/2/14	4/17/17	Contig	Huazhong Agricultural University	SAMN03015291	GCA_000747155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/155/GCA_000747155.1_ASM74715v1	-	CF5-1
Marine Group I thaumarchaeote SCGC AAA799-B03	1502289	PRJNA248330	248330	TACK group	Thaumarchaeota	1.00395	33.7	-	JOTA01	101	1370	1346	8/29/14	8/29/14	Scaffold	King Abdullah University of Science and Technology	SAMN02869637	GCA_000746785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/785/GCA_000746785.1_ASM74678v1	-	-
Marine Group I thaumarchaeote SCGC AAA799-D11	1502291	PRJNA248333	248333	TACK group	Thaumarchaeota	1.36064	34.3	-	JOSY01	77	1771	1732	8/29/14	8/29/14	Contig	King Abdullah University of Science and Technology	SAMN02869596	GCA_000746765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/765/GCA_000746765.1_ASM74676v1	-	-
Marine Group I thaumarchaeote SCGC AAA799-O18	1502294	PRJNA248338	248338	TACK group	Thaumarchaeota	0.522768	34.7	-	JOTC01	50	714	697	8/29/14	8/29/14	Scaffold	King Abdullah University of Science and Technology	SAMN02869643	GCA_000746705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/705/GCA_000746705.1_ASM74670v1	-	-
Marine Group I thaumarchaeote SCGC RSA3	1503183	PRJNA248555	248555	TACK group	Thaumarchaeota	1.85193	34	-	JOTD01	109	2459	2412	8/29/14	8/29/14	Contig	King Abdullah University of Science and Technology	SAMN02869648	GCA_000746745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/745/GCA_000746745.1_ASM74674v1	-	-
Marine Group I thaumarchaeote SCGC AAA799-D07	1502290	PRJNA248331	248331	TACK group	Thaumarchaeota	0.435918	33.9	-	JOTB01	33	580	562	8/29/14	8/29/14	Contig	King Abdullah University of Science and Technology	SAMN02869639	GCA_000746695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/695/GCA_000746695.1_ASM74669v1	-	-
Marine Group I thaumarchaeote SCGC AAA799-P11	1502295	PRJNA248339	248339	TACK group	Thaumarchaeota	1.08105	33.7	-	JOSZ01	111	1453	1433	8/29/14	8/29/14	Scaffold	King Abdullah University of Science and Technology	SAMN02869628	GCA_000746685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/685/GCA_000746685.1_ASM74668v1	-	-
Candidatus Paracaedibacter symbiosus	244582	PRJNA255046	255046	Proteobacteria	Alphaproteobacteria	2.7204	41.3175	plasmid pCPS01:NZ_JQAK01000007.1/JQAK01000007.1; plasmid pCPS02:NZ_JQAK01000011.1/JQAK01000011.1	JQAK01	50	2521	2258	9/23/14	4/17/17	Scaffold	University of Virginia	SAMN02996431	GCA_000757605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/605/GCA_000757605.1_ASM75760v1	-	PRA9
Paenibacillus wynnii	268407	PRJNA258366	258366	Terrabacteria group	Firmicutes	5.98886	44.9	-	JQCR01	3	5575	5328	9/25/14	4/17/17	Contig	Cornell University	SAMN02996812	GCA_000757885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/885/GCA_000757885.1_Pwynnii072014	-	DSM 18334
Arsenophonus endosymbiont str. Hangzhou of Nilaparvata lugens	1247024	PRJNA177650	177650	Proteobacteria	Gammaproteobacteria	2.95386	37.6	-	JRLH01	20	2673	2471	9/25/14	4/9/17	Scaffold	Nilaparvata lugens Genome Consortium	SAMN03078484	GCA_000757905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/905/GCA_000757905.1_ASM75790v1	25609551	Hangzhou
Sinorhizobium meliloti Rm41	1230587	PRJEB436	174855	Proteobacteria	Alphaproteobacteria	7.14969	62.0318	chromosome I:NC_018700.1/HE995405.1; plasmid pRM41A:NC_018682.1/HE995406.1; plasmid pSYMA:NC_018683.1/HE995407.1; plasmid pSYMB:NC_018701.1/HE995408.1	-	4	7169	6684	9/28/12	5/19/17	Complete Genome	"CeBiTec, Bielefeld University"	SAMEA2272434	GCA_000304415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/415/GCA_000304415.1_RM41	-	Rm41
Sinorhizobium meliloti BL225C	698936	PRJNA42477	42477	Proteobacteria	Alphaproteobacteria	6.97879	62.0294	chromosome:NC_017322.1/CP002740.1; plasmid pSINMEB01:NC_017324.1/CP002741.1; plasmid pSINMEB02:NC_017323.1/CP002742.1	-	3	6982	6492	5/24/11	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00017103	GCA_000147775.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/775/GCA_000147775.3_ASM14777v3	23431003	BL225C
Sinorhizobium meliloti GR4	1235461	PRJNA175860	175860	Proteobacteria	Alphaproteobacteria	7.14171	62.0265	chromosome:NC_019845.2/CP003933.2; plasmid pRmeGR4a:NC_019846.2/CP003934.2; plasmid pRmeGR4b:NC_019847.2/CP003935.2; plasmid pRmeGR4c:NC_019848.2/CP003936.2; plasmid pRmeGR4d:NC_019849.2/CP003937.2	-	5	7071	6588	12/13/12	4/3/17	Complete Genome	Estacion Experimental del Zaidin - Consejo Superior de Investigaciones Científicas	SAMN02603224	GCA_000320385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/320/385/GCA_000320385.2_ASM32038v2	-	GR4
Myxosarcina sp. GI1	1541065	PRJNA259928	259928	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.06986	40.1	-	JRFE01	76	6409	6058	9/19/14	4/9/17	Contig	National Cheng Kung University	SAMN03020304	GCA_000756305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/305/GCA_000756305.1_ASM75630v1	-	GI1
Vibrio variabilis	990271	PRJNA263994	263994	Proteobacteria	Gammaproteobacteria	4.52973	46.2	-	JRWM01	83	4179	4059	11/14/14	4/9/17	Contig	University of Malaya	SAMN03112719	GCA_000783325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/325/GCA_000783325.1_ASM78332v1	-	T01
Legionella massiliensis	1034943	PRJEB6598	259304	Proteobacteria	Gammaproteobacteria	4.38701	41.2	-	CCVW01	8	3746	3590	9/6/14	4/9/17	Contig	URMITE	SAMEA2747211	GCA_000756815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/815/GCA_000756815.1_PRJEB6598_assembly_1	-	LegA
Erythrobacter vulgaris	291985	PRJEB7073	260589	Proteobacteria	Alphaproteobacteria	2.85859	62.4	-	CCSI01	11	2811	2732	9/8/14	4/17/17	Contig	UTM	SAMEA2719621	GCA_000756795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/795/GCA_000756795.1_IDBA-UD	-	-
Flavobacterium aquatile LMG 4008	1453498	PRJNA260729	260729	FCB group	Bacteroidetes/Chlorobi group	3.49086	32.2	-	JRHH01	7	3197	3131	9/23/14	4/9/17	Contig	GCAT-SEEK	SAMN03025770	GCA_000757385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/385/GCA_000757385.1_ASM75738v1	-	LMG 4008
Halomonas salina	42565	PRJEB5956	242470	Proteobacteria	Gammaproteobacteria	4.10392	65.5	-	CDGR01	197	3854	3552	11/19/14	4/10/17	Contig	URMITE	SAMEA3114296	GCA_000821105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/105/GCA_000821105.1_Halomonas_salina_B6	-	B6
Tissierellia bacterium S7-1-4	1284708	PRJNA187465	187465	Terrabacteria group	Firmicutes	1.8395	35.5	-	JRMY01	65	1720	1648	9/26/14	4/9/17	Contig	JCVI	SAMN02850930	GCA_000758845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/845/GCA_000758845.1_04_NF40_HMP1634v01	-	S7-1-4
Tissierellia bacterium S5-A11	1230730	PRJNA187464	187464	Terrabacteria group	Firmicutes	3.29067	45.8	-	JRMZ01	119	3220	3060	9/26/14	4/9/17	Contig	JCVI	SAMN02850929	GCA_000758865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/865/GCA_000758865.1_04_NF40_HMP1633v01	-	S5-A11
Clostridiales bacterium S5-A14a	1230734	PRJNA187466	187466	Terrabacteria group	Firmicutes	1.53143	38.9	-	JRNA01	19	1404	1331	9/26/14	4/9/17	Contig	JCVI	SAMN02850931	GCA_000758905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/905/GCA_000758905.1_04_NF_x40_HMP1635v01	-	S5-A14a
Pseudoglutamicibacter albus DNF00011	1401063	PRJNA219659	219659	Terrabacteria group	Actinobacteria	2.47665	60	-	JRNH01	32	2188	2066	9/26/14	4/17/17	Contig	J. Craig Venter Institute	SAMN02850960	GCA_000758985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/985/GCA_000758985.1_04_NF40_HMP2128v01	-	DNF00011
Phaeodactylibacter xiamenensis	1524460	PRJNA255838	255838	FCB group	Bacteroidetes/Chlorobi group	7.86878	51	-	JPOS01	164	6052	5886	9/26/14	4/9/17	Contig	Xiamen University	SAMN02929976	GCA_000759025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/025/GCA_000759025.1_ASM75902v1	"2,505,239,325,502,670"	KD52
Corynebacterium tuscaniense DNF00037	1401064	PRJNA219660	219660	Terrabacteria group	Actinobacteria	2.22778	59.6	-	JRNG01	82	2100	2011	9/26/14	4/17/17	Contig	J. Craig Venter Institute	SAMN02850961	GCA_000759055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/055/GCA_000759055.1_04_NF40_HMP2129v01	-	DNF00037
Halomonas xinjiangensis	1166948	PRJNA257241	257241	Proteobacteria	Gammaproteobacteria	3.78665	60.7	-	JPZL01	9	3513	3398	9/28/14	4/9/17	Contig	"The Second Institute of Oceanography, State Oceanic Administration"	SAMN02949639	GCA_000759345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/345/GCA_000759345.1_ASM75934v1	-	TRM 0175
Pseudomonas lutea	243924	PRJNA261881	261881	Proteobacteria	Gammaproteobacteria	5.6475	60.2	-	JRMB01	5	5026	4867	9/29/14	4/9/17	Contig	Kyungpook National University	SAMN03077637	GCA_000759445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/445/GCA_000759445.1_ASM75944v1	27555890	DSM 17257
Sinorhizobium meliloti	382	PRJNA388336	388336	Proteobacteria	Alphaproteobacteria	7.04263	62.015	chromosome:NZ_CP021804.1/CP021804.1; plasmid accessoryA:NZ_CP021807.1/CP021807.1; plasmid psymA:NZ_CP021805.1/CP021805.1; plasmid psymB:NZ_CP021806.1/CP021806.1	-	4	6946	6430	6/16/17	8/7/17	Complete Genome	University of Minnesota	SAMN07175166	GCA_002197145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/145/GCA_002197145.1_ASM219714v1	-	T073
Cedecea sp. NFIX57	1566286	PRJEB20280	381728	Proteobacteria	Gammaproteobacteria	5.35392	54.5	-	FXAS01	142	5251	4964	4/20/17	5/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159353	GCA_900177785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/785/GCA_900177785.1_IMG-taxon_2671180115_annotated_assembly	-	NFIX57
Sinorhizobium meliloti	382	PRJNA388336	388336	Proteobacteria	Alphaproteobacteria	7.20585	62.011	chromosome:NZ_CP021793.1/CP021793.1; plasmid accessoryA:NZ_CP021796.1/CP021796.1; plasmid psymA:NZ_CP021794.1/CP021794.1; plasmid psymB:NZ_CP021795.1/CP021795.1	-	4	7345	6720	6/16/17	8/6/17	Complete Genome	University of Minnesota	SAMN07175169	GCA_002197025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/025/GCA_002197025.1_ASM219702v1	-	USDA1157
Acidicaldus organivorans	209650	PRJNA257903	257903	Proteobacteria	Alphaproteobacteria	2.98963	67.5	-	JPYW01	376	-	-	9/30/14	6/2/16	Scaffold	Northeastern University	SAMN02980076	GCA_000759655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/655/GCA_000759655.1_ASM75965v1	27239474	DX-1
Bacillus niacini NBRC 15566	1348654	PRJDB1310	231367	Terrabacteria group	Firmicutes	6.18371	38.2	-	BCVA01	109	5837	5707	2/27/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00047001	GCA_001591505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/505/GCA_001591505.1_ASM159150v1	-	NBRC 15566
Mycobacterium kyorinense	487514	PRJDB3036	258608	Terrabacteria group	Actinobacteria	5.30298	66.9	-	BBKA01	453	5188	4700	8/14/14	4/9/17	Contig	Kyorin University School of Medicine	SAMD00019087	GCA_000759695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/695/GCA_000759695.1_ASM75969v1	25323726	KUM060204T
Tolypothrix bouteillei VB521301	1479485	PRJNA242379	242379	Terrabacteria group	Cyanobacteria/Melainabacteria group	11.5723	42.4	-	JHEG02	70	9359	8215	9/30/14	4/10/17	Scaffold	Indian Institute Of Chemical biology	SAMN02697214	GCA_000760695.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/695/GCA_000760695.2_ASM76069v2	25700407	VB521301
Caloranaerobacter azorensis H53214	1156417	PRJNA232500	232500	Terrabacteria group	Firmicutes	2.4239	29.7	-	AZTB01	165	2378	2298	9/30/14	4/9/17	Contig	Third Institute of Oceanography	SAMN02950964	GCA_000761095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/095/GCA_000761095.1_ASM76109v1	-	H53214
Ensifer sojae CCBAU 05684	716928	PRJNA353922	353922	Proteobacteria	Alphaproteobacteria	6.09403	62.0061	chromosome:NZ_CP023067.1/CP023067.1; plasmid pSJ05684a:NZ_CP023069.1/CP023069.1; plasmid pSJ05684b:NZ_CP023068.1/CP023068.1	-	3	5887	5474	9/8/17	9/11/17	Complete Genome	China Agricultural University	SAMN07445560	GCA_002288525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/525/GCA_002288525.1_ASM228852v1	-	CCBAU 05684
Pseudomonas putida	303	PRJNA340924	340924	Proteobacteria	Gammaproteobacteria	6.03121	62	chromosome:NZ_CP017073.1/CP017073.1	-	1	5518	5314	11/28/16	4/5/17	Complete Genome	South China University of Technology	SAMN05715224	GCA_001886975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/975/GCA_001886975.1_ASM188697v1	-	PP112420
Exiguobacterium mexicanum	340146	PRJNA258610	258610	Terrabacteria group	Firmicutes	3.35929	51.1	-	JQGI01	825	3251	3150	10/3/14	4/17/17	Contig	University of Huddersfield	SAMN03000723	GCA_000763125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/125/GCA_000763125.1_ASM76312v1	25614564	HUD
Thermoactinomyces daqus	1329516	PRJNA257229	257229	Terrabacteria group	Firmicutes	3.44157	48.8	-	JPST01	86	3624	3444	10/3/14	4/9/17	Contig	CICC	SAMN02949508	GCA_000763315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/315/GCA_000763315.1_ASM76331v1	25573938	H-18
Microbacterium profundi	450380	PRJNA257114	257114	Terrabacteria group	Actinobacteria	3.36936	66.5	-	JPSY01	12	3257	3145	10/3/14	4/17/17	Contig	"The second institute of oceanography, SOA"	SAMN02947407	GCA_000763375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/375/GCA_000763375.1_ASM76337v1	26067975	Shh49
Bradyrhizobium icense	1274631	PRJNA325367	325367	Proteobacteria	Alphaproteobacteria	8.32277	62	chromosome:NZ_CP016428.1/CP016428.1	-	1	7868	7456	7/25/16	4/13/17	Complete Genome	Universidad Nacional Agraria La Molina	SAMN05230120	GCA_001693385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/385/GCA_001693385.1_ASM169338v1	-	LMTR 13
Paracoccus sphaerophysae	690417	PRJNA254739	254739	Proteobacteria	Alphaproteobacteria	3.35871	69.1	-	JRKS01	137	3396	3138	10/6/14	4/17/17	Contig	Wadsworth Center / NYSDOH	SAMN02927208	GCA_000763805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/805/GCA_000763805.1_ASM76380v1	-	HAMBI 3106
Paracoccus versutus	34007	PRJNA254739	254739	Proteobacteria	Alphaproteobacteria	5.50075	67.6	-	JRKO01	187	5387	5061	10/6/14	4/17/17	Contig	Wadsworth Center / NYSDOH	SAMN02927209	GCA_000763885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/885/GCA_000763885.1_ASM76388v1	-	DSM 582
Paracoccus halophilus	376733	PRJNA254739	254739	Proteobacteria	Alphaproteobacteria	4.01285	65.2	-	JRKN01	122	3880	3655	10/6/14	4/9/17	Contig	Wadsworth Center / NYSDOH	SAMN02927210	GCA_000763905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/905/GCA_000763905.1_ASM76390v1	-	JCM 14014
Oleiagrimonas soli	1543381	PRJNA260595	260595	Proteobacteria	Gammaproteobacteria	3.37996	66.3	-	JROI01	6	3015	2932	10/1/14	4/9/17	Scaffold	school of environment	SAMN03024267	GCA_000761445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/445/GCA_000761445.1_ASM76144v1	25977438	3.5X
Chromohalobacter israelensis	141390	PRJNA258580	258580	Proteobacteria	Gammaproteobacteria	3.66099	63.7	-	JQNW01	28	3411	3282	10/1/14	4/17/17	Contig	"The Second Institute of Oceanography, State Oceanic Administration"	SAMN03000030	GCA_000761475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/475/GCA_000761475.1_ASM76147v1	-	6768
Modestobacter sp. Leaf380	1736356	PRJNA297956	297956	Terrabacteria group	Actinobacteria	4.76469	74.2	-	LMQC01	25	4574	4406	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151746	GCA_001424485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/485/GCA_001424485.1_Leaf380	26633631	Leaf380
Lysinimicrobium mangrovi	1043493	PRJDB3045	262019	Terrabacteria group	Actinobacteria	2.96874	71.8	-	BBLU01	33	2777	2683	9/23/14	4/9/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00019178	GCA_000759715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/715/GCA_000759715.1_ASM75971v1	25377709	NBRC 105856
Helicobacter saguini	1548018	PRJNA261711	261711	Proteobacteria	delta/epsilon subdivisions	2.92261	34.7	-	JRMP01	178	2654	2339	10/2/14	4/9/17	Scaffold	Massachusetts Institute of Technology	SAMN03074666	GCA_000762875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/875/GCA_000762875.1_ASM76287v1	27245408	MIT 97-6194
Mycobacterium rufum	318424	PRJNA247390	247390	Terrabacteria group	Actinobacteria	6.17641	69.2	-	JROA01	4	5864	5443	10/2/14	10/12/16	Contig	Kyungpook National University	SAMN02777056	GCA_000762985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/985/GCA_000762985.1_ASM76298v1	27486485	JS14
Cryobacterium roopkundense	1001240	PRJNA252794	252794	Terrabacteria group	Actinobacteria	4.35683	65.3	-	JPXF01	226	4158	3849	10/6/14	4/17/17	Contig	Centre for Cellular and Molecular Biology	SAMN02863076	GCA_000764165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/165/GCA_000764165.1_ASM76416v1	25414505	RuG17
Thalassotalea sp. ND16A	1535422	PRJNA258177	258177	Proteobacteria	Gammaproteobacteria	4.58256	42.2	-	JQDZ01	130	3988	3808	10/6/14	4/9/17	Contig	Oak Ridge National Lab	SAMN02989441	GCA_000764205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/205/GCA_000764205.1_ASM76420v1	25428976	ND16A
Nitrospira moscoviensis	42253	PRJNA283178	283178	Nitrospirae	Nitrospira	4.58948	62	chromosome:NZ_CP011801.1/CP011801.1	-	1	4510	4391	8/25/15	4/16/17	Complete Genome	University of Vienna	SAMN03702441	GCA_001273775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/775/GCA_001273775.1_ASM127377v1	26305944	NSP M-1
Cellulophaga sp. E6(2014)	1495334	PRJNA245836	245836	FCB group	Bacteroidetes/Chlorobi group	4.42007	34.6	-	JQCT01	72	3851	3754	10/7/14	4/9/17	Contig	University of Massachusetts Dartmouth	SAMN02894428	GCA_000764435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/435/GCA_000764435.1_ASM76443v1	25676769	E6
Pseudomonas chlororaphis	587753	PRJNA277727	277727	Proteobacteria	Gammaproteobacteria	6.36026	62	chromosome:NZ_CP011020.1/CP011020.1	-	1	5651	5471	6/9/15	4/3/17	Complete Genome	Mississippi state university	SAMN03395035	GCA_001023535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/535/GCA_001023535.1_ASM102353v1	26634018	UFB2
Algibacter lectus	221126	PRJEB17200	351409	FCB group	Bacteroidetes/Chlorobi group	4.81634	33.3	-	FOLN01	33	3940	3861	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04489722	GCA_900112395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/395/GCA_900112395.1_IMG-taxon_2634166310_annotated_assembly	-	DSM 15365
Jejuia pallidilutea	504487	PRJDB1685	251710	FCB group	Bacteroidetes/Chlorobi group	3.77344	33.9	-	BBNR01	75	3426	2721	10/2/14	4/9/17	Contig	The University of Tokyo	SAMD00017331	GCA_000764775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/775/GCA_000764775.1_ASM76477v1	25477402	JCM 19301
Thalassobacter stenotrophicus	266809	PRJEB10698	301513	Proteobacteria	Alphaproteobacteria	3.59206	58.6	-	CYRX01	33	3590	3506	11/8/15	4/11/17	Contig	UVEG	SAMEA3529277	GCA_001458315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/315/GCA_001458315.1_T.stenotrophicusCECT5294_Spades_Prokka	-	CECT 5294
Pseudomonas rhizosphaerae	216142	PRJNA261876	261876	Proteobacteria	Gammaproteobacteria	4.68863	62	chromosome:NZ_CP009533.1/CP009533.1	-	1	4231	4082	10/1/14	4/17/17	Complete Genome	Kyungpook National University	SAMN03077633	GCA_000761155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/155/GCA_000761155.1_ASM76115v1	25483321	DSM 16299
Thalassobacter sp. 16PALIMAR09	1225651	PRJNA242388	242388	Proteobacteria	Alphaproteobacteria	3.53187	58.8	-	JHAK01	39	3465	3363	10/10/14	4/17/17	Contig	Univesitat de les Illes Balears (UIB)	SAMN02693504	GCA_000765485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/485/GCA_000765485.1_16PALIMAR09_01	25744993	16PALIMAR09
Helicobacter apodemus	135569	PRJNA261711	261711	Proteobacteria	delta/epsilon subdivisions	2.11494	33	-	JRPC01	628	2174	1903	10/10/14	4/17/17	Contig	Massachusetts Institute of Technology	SAMN03075562	GCA_000765745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/745/GCA_000765745.1_ASM76574v1	-	MIT-03-7007
Aeromonas hydrophila 4AK4	1354302	PRJNA210524	210524	Proteobacteria	Gammaproteobacteria	4.52799	62	chromosome:NZ_CP006579.1/CP006579.1	-	1	4164	3990	12/30/13	4/2/17	Complete Genome	Tsinghua University	SAMN02641590	GCA_000512185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/185/GCA_000512185.1_ASM51218v1	24000047	4AK4
Helicobacter muridarum	216	PRJNA261711	261711	Proteobacteria	delta/epsilon subdivisions	2.35375	32.7	-	JRPD01	92	2137	1869	10/10/14	4/9/17	Scaffold	Massachusetts Institute of Technology	SAMN03075563	GCA_000765805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/805/GCA_000765805.1_ASM76580v1	25428971	ST1
Helicobacter magdeburgensis	471858	PRJNA261711	261711	Proteobacteria	delta/epsilon subdivisions	2.08446	38.8	-	JRPE01	360	2258	1909	10/10/14	4/17/17	Contig	Massachusetts Institute of Technology	SAMN03075564	GCA_000765825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/825/GCA_000765825.1_ASM76582v1	-	MIT 96-1001
Helicobacter trogontum	50960	PRJNA261711	261711	Proteobacteria	delta/epsilon subdivisions	2.76703	33.1	-	JRPL01	129	2543	2253	10/10/14	4/9/17	Scaffold	Massachusetts Institute of Technology	SAMN03075571	GCA_000765905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/905/GCA_000765905.1_ASM76590v1	25428971	ATCC 700114
Methanococcoides methylutens	2226	PRJNA260970	260970	Euryarchaeota	Methanomicrobia	2.50851	42.5	-	JRHO01	15	2472	2355	10/10/14	4/9/17	Contig	King Abdullah University of Science and Technology (KAUST)	SAMN03067868	GCA_000765475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/475/GCA_000765475.1_Mmet_Version1	25414501	DSM 2657
Porphyromonas canoris	36875	PRJNA253589	253589	FCB group	Bacteroidetes/Chlorobi group	2.30867	44.6	-	JQZX01	21	1955	1873	10/10/14	4/10/17	Contig	UC Davis	SAMN03004343	GCA_000765975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/975/GCA_000765975.1_ASM76597v1	25858832	COT-108 OH1224
Listeriaceae bacterium FSL A5-0209	1497679	PRJNA246330	246330	Terrabacteria group	Firmicutes	3.60394	42.8	-	JNEZ01	50	3504	3399	10/10/14	4/9/17	Contig	Cornell University	SAMN02754399	GCA_000766055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/766/055/GCA_000766055.1_ASM76605v1	-	FSL A5-0209
Listeria newyorkensis	1497681	PRJNA230017	230017	Terrabacteria group	Firmicutes	3.45309	43.1	-	AZHN01	79	3279	3185	7/9/15	3/1/17	Scaffold	University of Milan	SAMN02418979	GCA_001050305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/305/GCA_001050305.1_ASM105030v1	26185097	1903
Nitrobacter winogradskyi Nb-255	323098	PRJNA13474	13474	Proteobacteria	Alphaproteobacteria	3.40209	62	chromosome:NC_007406.1/CP000115.1	-	1	3224	2984	9/12/05	4/6/17	Complete Genome	DOE Joint Genome Institute	SAMN02598308	GCA_000012725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/725/GCA_000012725.1_ASM1272v1	16517654	Nb-255
Achromobacter insuavis AXX-A	1003200	PRJNA65117	65117	Proteobacteria	Betaproteobacteria	6.86081	67.7	-	AFRQ01	13	6210	5920	6/28/11	5/18/17	Scaffold	Laboratory of Bacteriology - Faculty of Medecine Dijon	SAMN02471472	GCA_000219745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/745/GCA_000219745.1_ASM21974v1	-	AXX-A
Corynebacterium auriscanis	99807	PRJNA262562	262562	Terrabacteria group	Actinobacteria	2.56886	58.5	-	JRVJ01	33	2246	1766	10/17/14	4/17/17	Contig	UFMG Brazil	SAMN03106126	GCA_000767255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/255/GCA_000767255.1_ASM76725v1	-	CIP 106629
Gloeobacter violaceus PCC 7421	251221	PRJNA9606	9606	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.65902	62	chromosome:NC_005125.1/BA000045.2	-	1	4482	4430	9/25/03	10/7/16	Complete Genome	Kazusa	SAMD00061120	GCA_000011385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/385/GCA_000011385.1_ASM1138v1	"1,462,129,214,621,290"	PCC 7421
Streptococcus sinensis	176090	PRJNA251999	251999	Terrabacteria group	Firmicutes	2.06184	42.2	-	JPEN01	116	2008	1862	10/22/14	4/17/17	Contig	The University of Hong Kong	SAMN02848449	GCA_000767835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/835/GCA_000767835.1_ASM76783v1	-	HKU4
Actibacterium atlanticum	1461693	PRJNA196737	196737	Proteobacteria	Alphaproteobacteria	3.17638	59	-	AQQY01	24	3165	3092	5/2/14	4/9/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02742681	GCA_000671395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/395/GCA_000671395.1_SOAPdenovo_v1.05	-	22II-S11-z10
Aquabacterium sp. NJ1	1538295	PRJNA258596	258596	Proteobacteria	Betaproteobacteria	5.02097	63.8	-	JRKM01	17	4371	4277	10/23/14	4/9/17	Contig	Indiana University Kokomo	SAMN03075592	GCA_000768065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/065/GCA_000768065.1_ASM76806v1	25477416	NJ1
Lysobacter daejeonensis GH1-9	1385517	PRJNA214589	214589	Proteobacteria	Gammaproteobacteria	3.27506	67.3	-	AVPU01	90	3020	2914	10/24/14	4/17/17	Contig	Huazhong Agricultural University	SAMN03098277	GCA_000768355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/355/GCA_000768355.1_ASM76835v1	-	GH1-9
Lysobacter concretionis Ko07 = DSM 16239	1122185	PRJNA214580	214580	Proteobacteria	Gammaproteobacteria	3.03212	67.2	-	AVPS01	26	2675	2575	10/24/14	4/17/17	Contig	Huazhong Agricultural University	SAMN03098275	GCA_000768345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/345/GCA_000768345.1_ASM76834v1	-	Ko07
Lysobacter arseniciresistens ZS79	913325	PRJNA214588	214588	Proteobacteria	Gammaproteobacteria	3.08511	69.6	-	AVPT01	98	2839	2722	10/24/14	4/9/17	Contig	Huazhong Agricultural University	SAMN03098276	GCA_000768335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/335/GCA_000768335.1_ASM76833v1	26516404	ZS79
Knoellia sinensis KCTC 19936	1385520	PRJNA214599	214599	Terrabacteria group	Actinobacteria	3.98706	68.3	-	AVPJ01	61	3833	3713	10/27/14	4/17/17	Contig	Huazhong Agricultural University	SAMN03144716	GCA_000768705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/705/GCA_000768705.1_ASM76870v1	-	KCTC 19936
Knoellia aerolata DSM 18566	1385519	PRJNA214594	214594	Terrabacteria group	Actinobacteria	4.08797	71.3	-	AVPL01	230	3832	3636	10/27/14	4/17/17	Contig	Huazhong Agricultural University	SAMN03144715	GCA_000768695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/695/GCA_000768695.1_ASM76869v1	-	DSM 18566
Knoellia flava TL1	1385518	PRJNA214586	214586	Terrabacteria group	Actinobacteria	3.5617	71.5	-	AVPI01	94	3406	3249	10/27/14	4/17/17	Contig	Huazhong Agricultural University	SAMN03144714	GCA_000768675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/675/GCA_000768675.1_ASM76867v1	-	TL1
Knoellia subterranea KCTC 19937	1385521	PRJNA214600	214600	Terrabacteria group	Actinobacteria	3.56606	69	-	AVPK01	33	3456	3337	10/27/14	4/17/17	Contig	Huazhong Agricultural University	SAMN03144717	GCA_000768685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/685/GCA_000768685.1_ASM76868v1	-	KCTC 19937
Porphyromonadaceae bacterium COT-184 OH4590	1517682	PRJNA253947	253947	FCB group	Bacteroidetes/Chlorobi group	2.39248	37.6	-	JRAN01	79	2152	2023	10/27/14	4/9/17	Contig	UC Davis	SAMN03002886	GCA_000768855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/855/GCA_000768855.1_ASM76885v1	25858832	COT-184 OH4590
Cellulomonas cellasea DSM 20118	1408250	PRJNA221764	221764	Terrabacteria group	Actinobacteria	3.9137	74.6	-	AXNT01	207	3615	3356	10/16/14	4/17/17	Contig	State Key Laborary of Agricultural Microbiology	SAMN03112937	GCA_000767135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/135/GCA_000767135.1_ASM76713v1	-	DSM 20118
Cellulomonas carbonis T26	947969	PRJNA215138	215138	Terrabacteria group	Actinobacteria	3.97625	73	-	AXCY01	435	3620	3342	10/16/14	4/9/17	Contig	Huazhong Agricultural University	SAMN03113093	GCA_000767175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/175/GCA_000767175.1_ASM76717v1	26587181	T26
Cellulomonas bogoriensis 69B4 = DSM 16987	1386082	PRJNA215139	215139	Terrabacteria group	Actinobacteria	3.18336	72.2	-	AXCZ01	524	3091	2700	10/16/14	4/17/17	Contig	Huazhong Agricultural University	SAMN03113094	GCA_000767165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/165/GCA_000767165.1_ASM76716v1	-	69B4
Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133	862422	PRJNA215137	215137	Terrabacteria group	Actinobacteria	3.61774	73.8	-	AXCX01	841	3445	3375	10/16/14	10/16/14	Contig	Huazhong Agricultural University	SAMN02712077	GCA_000767215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/215/GCA_000767215.1_ASM76721v1	-	DSM 3133
Listeria booriae	1552123	PRJNA246331	246331	Terrabacteria group	Firmicutes	3.43696	42.1	-	JNFA01	31	3258	3162	10/10/14	2/26/17	Contig	Cornell University	SAMN02754400	GCA_000766865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/766/865/GCA_000766865.1_ASM76686v1	25342111	FSL A5-0281
Polaromonas sp. JS666	296591	PRJNA13121	13121	Proteobacteria	Betaproteobacteria	5.89868	61.9974	chromosome:NC_007948.1/CP000316.1; plasmid 1:NC_007949.1/CP000317.1; plasmid 2:NC_007950.1/CP000318.1	-	3	5660	5485	4/10/06	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02598293	GCA_000013865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/865/GCA_000013865.1_ASM1386v1	-	JS666
Tateyamaria omphalii	299262	PRJNA361516	361516	Proteobacteria	Alphaproteobacteria	4.31546	61.9801	chromosome:NZ_CP019312.1/CP019312.1; plasmid pDOK1-4-1:NZ_CP019313.1/CP019313.1; plasmid pDOK1-4-2:NZ_CP019314.1/CP019314.1; plasmid pDOK1-4-3:NZ_CP019315.1/CP019315.1; plasmid pDOK1-4-4:NZ_CP019316.1/CP019316.1; plasmid pDOK1-4-5:NZ_CP019317.1/CP019317.1; plasmid pDOK1-4-6:NZ_CP019318.1/CP019318.1; plasmid pDOK1-4-7:NZ_CP019319.1/CP019319.1	-	8	4246	4113	1/23/17	4/17/17	Complete Genome	Korea Research Institute of Bioscience & Biotechnology	SAMN06234538	GCA_001969365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/365/GCA_001969365.1_ASM196936v1	-	DOK1-4
Haloarcula sp. CBA1115	1592728	PRJNA271840	271840	Euryarchaeota	Halobacteria	4.22505	61.9777	chromosome:NZ_CP010529.1/CP010529.1; plasmid unnamed1:NZ_CP010530.1/CP010530.1; plasmid unnamed2:NZ_CP010531.1/CP010531.1; plasmid unnamed3:NZ_CP010532.1/CP010532.1; plasmid unnamed4:NZ_CP010533.1/CP010533.1; plasmid unnamed5:NZ_CP010534.1/CP010534.1	-	6	4155	3966	1/23/15	3/22/17	Complete Genome	Kyung Hee University	SAMN03278120	GCA_000827835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/827/835/GCA_000827835.1_ASM82783v1	-	CBA1115
Erwinia oleae	796334	PRJNA251971	251971	Proteobacteria	Gammaproteobacteria	4.74441	54.7	-	JNVB01	185	4631	4276	10/31/14	4/17/17	Contig	International Centre for Genetic Engineering and Biotechnology	SAMN02843332	GCA_000770305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/305/GCA_000770305.1_ASM77030v1	25502684	DAPP-PG531
Sinorhizobium meliloti AK83	693982	PRJNA41993	41993	Proteobacteria	Alphaproteobacteria	7.14047	61.9493	chromosome 1:NC_015590.1/CP002781.1; chromosome 2:NC_015596.1/CP002782.1; chromosome 3:NC_015591.1/CP002783.1; plasmid pSINME01:NC_015597.1/CP002784.1; plasmid pSINME02:NC_015592.1/CP002785.1	-	5	7292	6633	5/26/11	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00017059	GCA_000147795.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/795/GCA_000147795.3_ASM14779v3	23431003	AK83
Pontibacillus yanchengensis Y32	1385514	PRJNA214569	214569	Terrabacteria group	Firmicutes	4.28146	38.6	-	AVBF01	153	4108	4009	11/3/14	4/17/17	Contig	State Key Laboratory of Agricultural University	SAMN02650962	GCA_000770635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/635/GCA_000770635.1_ASM77063v1	26561516	Y32
Pontibacillus chungwhensis BH030062	1385513	PRJNA214567	214567	Terrabacteria group	Firmicutes	3.87293	40.8	-	AVBG01	40	3847	3754	11/3/14	4/17/17	Contig	State Key Laboratory of Agricultural University	SAMN02665299	GCA_000770675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/675/GCA_000770675.1_ASM77067v1	-	BH030062
Streptomyces galbus	33898	PRJNA259693	259693	Terrabacteria group	Actinobacteria	10.0531	71	-	JRHJ01	104	8859	8307	11/6/14	3/11/17	Contig	GreenGene Biotech Inc.	SAMN03031363	GCA_000772895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/895/GCA_000772895.1_ASM77289v1	25336658	KCCM 41354
Erwinia typographi	371042	PRJNA263655	263655	Proteobacteria	Gammaproteobacteria	5.74952	55	-	JRUQ01	137	5557	5303	11/10/14	4/17/17	Contig	University of Malaya	SAMN03105172	GCA_000773975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/975/GCA_000773975.1_ASM77397v1	-	M043b
Flavobacterium beibuense F44-8	1406840	PRJNA221767	221767	FCB group	Bacteroidetes/Chlorobi group	3.80076	37.7	-	JRLV01	61	3449	3367	10/28/14	4/17/17	Contig	hzau	SAMN03078689	GCA_000769915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/915/GCA_000769915.1_ASM76991v1	-	F44-8
Vibrio caribbeanicus ATCC BAA-2122	796620	PRJNA49601	49601	Proteobacteria	Gammaproteobacteria	4.41054	41.6	-	AEIU01	126	3996	3861	10/20/10	5/19/17	Contig	FDA	SAMN02952911	GCA_000165125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/165/125/GCA_000165125.2_Vcar_1.0	21930677	ATCC BAA-2122
Thermus filiformis	276	PRJNA253908	253908	Terrabacteria group	Deinococcus-Thermus	2.38608	69	-	JPSL02	40	2402	2271	11/4/14	4/10/17	Contig	Centro Nacional de Pesquisa em Energia e Materiais	SAMN02898028	GCA_000771745.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/745/GCA_000771745.2_THFILIv2	25977443	ATCC 43280
Gallibacterium genomosp. 1	155515	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.35711	38.3	-	JPXX01	51	2247	2104	11/4/14	4/9/17	Contig	University of Copenhagen	SAMN02344111	GCA_000771875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/875/GCA_000771875.1_ASM77187v1	-	CCM5974
Pseudomonas mediterranea	183795	PRJEB16456	349400	Proteobacteria	Gammaproteobacteria	6.34624	61.2	chromosome I:NZ_LT629790.1/LT629790.1	-	1	5645	5482	10/21/16	4/13/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216476	GCA_900106005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/005/GCA_900106005.1_IMG-taxon_2675902957_annotated_assembly	-	DSM 16733
Gallibacterium genomosp. 2	155517	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.50218	38.6	-	JPXY01	82	2410	2263	11/4/14	4/17/17	Contig	University of Copenhagen	SAMN02344112	GCA_000771895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/895/GCA_000771895.1_ASM77189v1	-	CCM5976
Chelonobacter oris	505317	PRJNA265026	265026	Proteobacteria	Gammaproteobacteria	2.61073	47.1	-	JSUM01	35	2462	2350	11/5/14	4/17/17	Contig	University of Copenhagen	SAMN03145057	GCA_000772535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/535/GCA_000772535.1_ASM77253v1	25523777	1662
Oenococcus alcoholitolerans	931074	PRJNA221725	221725	Terrabacteria group	Firmicutes	1.15038	39.5	-	AXCV01	694	1622	1598	10/28/14	11/7/14	Contig	UFRJ - Lab. Microbiologia	SAMN03145627	GCA_000769695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/695/GCA_000769695.1_ASM76969v1	25315101	UFRJ-M7.2.18
Altererythrobacter atlanticus	1267766	PRJNA282882	282882	Proteobacteria	Alphaproteobacteria	3.47511	61.9128	chromosome:NZ_CP011452.2/CP011452.2; plasmid unnamed:NZ_CP011453.2/CP011453.2	-	2	3297	3167	5/15/15	4/11/17	Complete Genome	"Second Institute of Oceanography, State Oceanic Administration"	SAMN03658145	GCA_001008165.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/165/GCA_001008165.2_ASM100816v2	-	26DY36
Pontibacillus litoralis JSM 072002	1385512	PRJNA214571	214571	Terrabacteria group	Firmicutes	3.20424	38.2	-	AVPG01	97	3186	3082	11/12/14	4/17/17	Contig	Huazhong Agricultural University	SAMN03177048	GCA_000775615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/615/GCA_000775615.1_ASM77561v1	-	JSM 072002
Dermabacter hominis 1368	1450519	PRJNA235370	235370	Terrabacteria group	Actinobacteria	2.51063	62.7	-	JDRS01	26	2295	2164	6/10/14	4/9/17	Scaffold	Bielefeld University	SAMN02614628	GCA_000775415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/415/GCA_000775415.1_DHOM_v1	25059872	1368
bacterium endosymbiont of Mortierella elongata FMR23-6	1562701	PRJDB3226	266034	Proteobacteria	Betaproteobacteria	2.79538	48.8	-	BBOF01	12	2358	2149	10/31/14	4/9/17	Scaffold	"Ibaraki University, college of agriculture"	SAMD00020951	GCA_000775775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/775/GCA_000775775.1_ac_endosymbM.elongata_FMR23-6_01	25502669	-
Sphingobacteriaceae bacterium DW12	1550091	PRJNA262031	262031	FCB group	Bacteroidetes/Chlorobi group	5.31665	41	-	JROE01	78	4258	4168	11/14/14	4/9/17	Contig	Inner Mongolia Agricultural University	SAMN03079345	GCA_000783305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/305/GCA_000783305.1_ASM78330v1	-	DW12
Halopiger salifodinae	1202768	PRJNA261874	261874	Euryarchaeota	Halobacteria	4.3509	65.4	-	JROF01	81	4159	3978	11/17/14	4/9/17	Contig	Zhejiang University	SAMN03077632	GCA_000784335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/335/GCA_000784335.1_ASM78433v1	"2,356,323,326,664,650"	KCY07-B2
Methanolacinia paynteri	230356	PRJNA222641	222641	Euryarchaeota	Methanomicrobia	2.7917	47.5	-	AXDV01	46	2814	2664	11/17/14	4/17/17	Scaffold	Leibniz Institute DSMZ Braunschweig	SAMN03196739	GCA_000784355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/355/GCA_000784355.1_Metpay	-	DSM 2545
Bacillus aryabhattai	412384	PRJNA246347	246347	Terrabacteria group	Firmicutes	5.31384	38	-	JMTL01	15	5470	5220	6/10/15	4/3/17	Scaffold	Life Sciences	SAMN02756826	GCA_001025015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/015/GCA_001025015.1_ASM102501v1	-	T61
Legionella norrlandica	1498499	PRJNA246269	246269	Proteobacteria	Gammaproteobacteria	3.07085	37.5	-	JNCF01	157	2777	2342	10/31/14	4/9/17	Contig	public health agency of sweden	SAMN02746164	GCA_000770585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/585/GCA_000770585.1_ASM77058v1	25406235	LEGN
Sphingobium sp. EP60837	1855519	PRJNA323951	323951	Proteobacteria	Alphaproteobacteria	4.2617	61.9044	chromosome 1:NZ_CP015986.1/CP015986.1; chromosome 2:NZ_CP015987.1/CP015987.1; plasmid pEP1:NZ_CP015988.1/CP015988.1; plasmid pEP2:NZ_CP015989.1/CP015989.1	-	4	4117	3929	6/6/16	4/12/17	Complete Genome	Seoul National University	SAMN05188807	GCA_001658005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/005/GCA_001658005.1_ASM165800v1	-	EP60837
Candidatus Thiomargarita nelsonii	1003181	PRJNA266451	266451	Proteobacteria	Gammaproteobacteria	12.9121	42.2	-	JSZA01	2481	12162	9975	11/17/14	11/17/14	Scaffold	University of Minnesota - Twin Cities	SAMN03165106	GCA_000785145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/145/GCA_000785145.1_ASM78514v1	-	-
Candidatus Magnetobacterium casensis	1455061	PRJNA236065	236065	Nitrospirae	Nitrospira	3.41568	48.9	-	JMFO01	70	3210	3041	6/27/14	4/9/17	Contig	"Institute of Geology and Geophysics, Chinese Academy of Sciences"	SAMN02726339	GCA_000714715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/715/GCA_000714715.1_Draft_genome_of_Candidatus_Magnetobacterium_casensis	24914800	MYR-1
Paraburkholderia sacchari	159450	PRJNA263694	263694	Proteobacteria	Betaproteobacteria	7.26374	64	-	JTDB01	112	6517	6246	11/18/14	4/17/17	Contig	University of Sao Paulo	SAMN03120802	GCA_000785435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/435/GCA_000785435.1_ASM78543v1	25953171	LMG 19450
Comamonas testosteroni TK102	1392005	PRJNA216961	216961	Proteobacteria	Betaproteobacteria	6.0627	61.9	chromosome:NZ_CP006704.1/CP006704.1	-	1	5593	5295	8/14/14	4/2/17	Complete Genome	Shizuoka University	SAMN03081477	GCA_000739375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/375/GCA_000739375.1_ASM73937v1	25212615	TK102
Spirochaeta thermophila DSM 6192	665571	PRJNA39877	39877	Spirochaetes	Spirochaetia	2.47264	61.9	chromosome:NC_014484.1/CP001698.1	-	1	2274	2193	9/10/10	4/7/17	Complete Genome	Georg-August-University Goettingen	SAMN02603259	GCA_000147075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/075/GCA_000147075.1_ASM14707v1	20935097	DSM 6192
Streptococcus hongkongensis	910939	PRJNA263025	263025	Terrabacteria group	Firmicutes	1.99234	36.7	-	JRYN01	111	1993	1689	11/21/14	11/21/14	Contig	"CIAD, A.C."	SAMN03093231	GCA_000785845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/845/GCA_000785845.1_CAIM1895T_spades_scaffold	-	CAIM 1895
Actinoplanes utahensis	1869	PRJNA262620	262620	Terrabacteria group	Actinobacteria	9.48984	71.2	-	JRTT01	141	8631	8181	11/21/14	4/17/17	Contig	Complutense University of Madrid	SAMN03078836	GCA_000785985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/985/GCA_000785985.1_ASM78598v1	25573944	NRRL 12052
Bdellovibrio sp. SKB1291214	1732569	PRJNA383395	383395	Proteobacteria	Oligoflexia	3.73059	44.8	-	NELQ01	20	3673	3552	6/27/17	6/29/17	Scaffold	"CENTRO DE BIOTECNOLOGIA GENOMICA, INSTITUTO POLITECNICO NACIONAL"	SAMN06763661	GCA_002209355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/355/GCA_002209355.1_ASM220935v1	-	SKB1291214
Candidatus Scalindua brodae	237368	PRJNA262561	262561	PVC group	Planctomycetes	4.08417	39.6	-	JRYO01	282	4055	4016	11/25/14	1/29/15	Contig	Radboud University Nijmegen	SAMN03083676	GCA_000786775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/775/GCA_000786775.1_ASM78677v1	25573945	-
Solemya velum gill symbiont	2340	PRJNA258543	258543	Proteobacteria	Gammaproteobacteria	2.70238	51	-	JRAA01	10	2637	2525	11/26/14	4/2/17	Scaffold	Harvard University	SAMN02999586	GCA_000787395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/395/GCA_000787395.1_ASM78739v1	25342549	WH
Bacillus okhensis	333138	PRJNA261559	261559	Terrabacteria group	Firmicutes	4.86528	38.2	-	JRJU01	98	4871	4593	11/26/14	4/17/17	Contig	University of Hyderabad	SAMN03074851	GCA_000787375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/375/GCA_000787375.1_ASM78737v1	26697400	Kh10-101
candidate division TM6 bacterium Zodletone_IIa	1511133	PRJNA234315	234315	unclassified Bacteria	Bacteria candidate phyla	0.218807	40.1	-	JOKC01	227	179	175	11/21/14	11/21/14	Contig	The University of Oklahoma	SAMN02584376	GCA_000786135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/135/GCA_000786135.1_ASM78613v1	-	-
Kocuria polaris	136273	PRJNA252796	252796	Terrabacteria group	Actinobacteria	3.7798	72.8	-	JSUH01	67	3451	3293	11/23/14	4/9/17	Contig	Centre for Cellular and Molecular Biology	SAMN02863078	GCA_000786195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/195/GCA_000786195.1_ASM78619v1	"1,265,617,126,238,090"	CMS 76or
Pseudomonas putida GB-1	76869	PRJNA17629	17629	Proteobacteria	Gammaproteobacteria	6.07843	61.9	chromosome:NC_010322.1/CP000926.1	-	1	5586	5408	2/5/08	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00623059	GCA_000019125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/125/GCA_000019125.1_ASM1912v1	-	GB-1
Streptacidiphilus neutrinimicus	105420	PRJDB3297	266938	Terrabacteria group	Actinobacteria	8.41822	71.9	-	BBPO01	184	7726	7120	11/21/14	4/17/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00022875	GCA_000787815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/815/GCA_000787815.1_ASM78781v1	25573937	NBRC 100921
Streptacidiphilus melanogenes	411235	PRJDB3297	266938	Terrabacteria group	Actinobacteria	8.77192	71.9	-	BBPP01	107	7946	7482	11/21/14	4/17/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00022876	GCA_000787835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/835/GCA_000787835.1_ASM78783v1	25573937	NBRC 103184
Streptacidiphilus anmyonensis	405782	PRJDB3297	266938	Terrabacteria group	Actinobacteria	9.38642	72	-	BBPQ01	153	8463	7941	11/21/14	4/17/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00022877	GCA_000787855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/855/GCA_000787855.1_ASM78785v1	25573937	NBRC 103185
Streptomyces xiaopingdaonensis	1565415	PRJNA91113	91113	Terrabacteria group	Actinobacteria	6.46698	72.2	-	AJTQ01	385	5690	5297	5/11/12	5/19/17	Contig	Dalian University of Technology 	SAMN02469700	GCA_000262345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/345/GCA_000262345.1_Streptomyces_sulphureus_L180_version_1.0	22843605	DUT180
Pseudomonas putida F1	351746	PRJNA13909	13909	Proteobacteria	Gammaproteobacteria	5.95996	61.9	chromosome:NC_009512.1/CP000712.1	-	1	5331	5207	5/31/07	4/28/17	Complete Genome	US DOE Joint Genome Institute	SAMN00623058	GCA_000016865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/865/GCA_000016865.1_ASM1686v1	-	F1
Candidatus Solibacter usitatus Ellin6076	234267	PRJNA12638	12638	Acidobacteria	Solibacteres	9.96564	61.9	chromosome:NC_008536.1/CP000473.1	-	1	8181	8004	10/16/06	8/28/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598277	GCA_000014905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/905/GCA_000014905.1_ASM1490v1	-	Ellin6076
Neosynechococcus sphagnicola sy1	1497020	PRJNA244289	244289	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.33137	51.6	-	JJML01	118	4179	3263	9/29/14	4/9/17	Contig	Palacky University Olomouc	SAMN02725026	GCA_000775285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/285/GCA_000775285.1_ASM77528v1	25283338	CAUP A 1101
Kocuria marina	223184	PRJNA235978	235978	Terrabacteria group	Actinobacteria	3.06614	68.8	-	JROM01	62	2757	2555	11/25/14	4/17/17	Contig	Lab. de Biologia Molecular Ambiental - CBMEG/UNICAMP	SAMN03072054	GCA_000786655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/655/GCA_000786655.1_ASM78665v1	-	SO9-6
Hyphomonas neptunium ATCC 15444	228405	PRJNA15721	15721	Proteobacteria	Alphaproteobacteria	3.70502	61.9	chromosome:NC_008358.1/CP000158.1	-	1	3534	3461	9/18/06	4/17/17	Complete Genome	TIGR	SAMN02604041	GCA_000013025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/025/GCA_000013025.1_ASM1302v1	16980487	ATCC 15444
Streptacidiphilus carbonis	105422	PRJDB3297	266938	Terrabacteria group	Actinobacteria	8.45728	71.3	-	BBPM01	139	7585	7062	11/21/14	4/17/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00022873	GCA_000787775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/775/GCA_000787775.1_ASM78777v1	25573937	NBRC 100919
Streptacidiphilus jiangxiensis	235985	PRJDB3297	266938	Terrabacteria group	Actinobacteria	9.52873	72	-	BBPN01	96	8719	8285	11/21/14	4/10/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00022874	GCA_000787795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/795/GCA_000787795.1_ASM78779v1	25573937	NBRC 100920
Flaviramulus ichthyoenteri Th78	1380600	PRJNA213665	213665	FCB group	Bacteroidetes/Chlorobi group	3.95323	32.1	-	AUYN01	5	3440	3325	12/3/14	4/9/17	Scaffold	Ocean University of China	SAMN03252360	GCA_000789235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/235/GCA_000789235.1_ASM78923v1	25652846	Th78
Psychroserpens sp. Hel_I_66	1250004	PRJNA251763	251763	FCB group	Bacteroidetes/Chlorobi group	3.84299	34.1	-	JUGU01	1	3411	3333	12/9/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02841244	GCA_000799465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/465/GCA_000799465.1_ASM79946v1	-	Hel_I_66
Robinsoniella peoriensis	180332	PRJNA268246	268246	Terrabacteria group	Firmicutes	7.39142	41.1	-	JTGN01	32	5925	5734	12/4/14	4/9/17	Contig	Gateway Technical College	SAMN03217299	GCA_000797495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/495/GCA_000797495.1_ASM79749v1	25593266	WT
Xenorhabdus sp. GDc328	742178	PRJNA291055	291055	Proteobacteria	Gammaproteobacteria	4.15547	44.6	-	LGYQ01	300	3957	3566	8/27/15	4/16/17	Contig	University of the Witwatersrand	SAMN03939244	GCA_001275405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/405/GCA_001275405.1_ASM127540v1	26494681	GDc328
Firmicutes bacterium ZOR0006	1339252	PRJNA205588	205588	Terrabacteria group	Firmicutes	1.96715	38.3	-	JTLC01	93	1859	1802	12/8/14	4/9/17	Scaffold	University of Oregon	SAMN03021522	GCA_000798955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/955/GCA_000798955.1_ZOR0006.1	-	ZOR0006
Cetobacterium sp. ZOR0034	1339239	PRJNA205592	205592	Fusobacteria	Fusobacteriia	2.73831	30.1	-	JTLI01	121	2600	2521	12/8/14	4/9/17	Scaffold	University of Oregon	SAMN03021532	GCA_000799075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/075/GCA_000799075.1_ZOR0034.1	-	ZOR0034
Chitinibacter sp. ZOR0017	1339254	PRJNA205591	205591	Proteobacteria	Betaproteobacteria	3.47863	55.9	-	JTLG01	46	3271	3171	12/8/14	4/9/17	Scaffold	University of Oregon	SAMN03021528	GCA_000799095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/095/GCA_000799095.1_ZOR0017.1	-	ZOR0017
Herbiconiux sp. YR403	1500280	PRJNA247521	247521	Terrabacteria group	Actinobacteria	3.60404	62	-	JUGL01	13	3353	3267	12/9/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02787102	GCA_000799285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/285/GCA_000799285.1_ASM79928v1	-	YR403
Aureimonas altamirensis	370622	PRJDB3816	300645	Proteobacteria	Alphaproteobacteria	4.18755	64.8	-	BBWQ01	32	3981	3888	11/7/15	4/11/17	Contig	"Graduate School of Life Sciences, Tohoku University"	SAMD00028748	GCA_001463885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/885/GCA_001463885.1_ASM146388v1	26534993	DSM 21988
Leisingera sp. ANG1	1002340	PRJNA65083	65083	Proteobacteria	Alphaproteobacteria	4.58764	62.8	-	AFCF02	20	4372	4269	4/11/11	4/10/17	Scaffold	University of Connecticut	SAMN02471702	GCA_000203975.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/203/975/GCA_000203975.3_ASM20397v3	21551313	ANG1
Rhizobium sp. NT-26	1125847	PRJEB4806	223374	Proteobacteria	Alphaproteobacteria	4.57742	61.8736	chromosome:NZ_FO082820.1/FO082820.1; plasmid NT26_p1:NZ_FO082821.1/FO082821.1; plasmid NT26_p2:NZ_FO082822.1/FO082822.1	-	3	4453	4309	12/16/12	4/10/17	Complete Genome	Genoscope CEA	SAMEA3283108	GCA_000967425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/425/GCA_000967425.1_ASM96742v1	23589360	NT-26
Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446	521098	PRJNA29405	29405	Terrabacteria group	Firmicutes	3.20569	61.8577	chromosome:NC_013205.1/CP001727.1; plasmid pAACI01:NC_013206.1/CP001728.1; plasmid pAACI02:NC_013207.1/CP001729.1; plasmid pAACI03:NC_013208.1/CP001730.1	-	4	3182	3030	9/9/09	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00001901	GCA_000024285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/285/GCA_000024285.1_ASM2428v1	21304673	DSM 446
Sinorhizobium meliloti RU11/001	1401243	PRJEB4559	232013	Proteobacteria	Alphaproteobacteria	7.69291	61.8324	chromosome:NZ_CP021219.1/CP021219.1; plasmid pSmeRU11a:NZ_CP021213.1/CP021213.1; plasmid pSmeRU11b:NZ_CP021214.1/CP021214.1; plasmid pSmeRU11c:NZ_CP021215.1/CP021215.1; plasmid pSmeRU11d:NZ_CP021216.1/CP021216.1; plasmid pSymA:NZ_CP021217.1/CP021217.1; plasmid pSymB:NZ_CP021218.1/CP021218.1	-	7	7740	7106	6/16/17	6/21/17	Complete Genome	CEBITEC	SAMEA3146337	GCA_001050915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/915/GCA_001050915.2_ASM105091v2	-	RU11/001
Hymenobacter sp. APR13	1356852	PRJNA210966	210966	FCB group	Bacteroidetes/Chlorobi group	5.01059	61.8123	chromosome:NZ_CP006587.1/CP006587.1; plasmid pHA:NZ_CP006588.1/CP006588.1; plasmid pHB:NZ_CP006589.1/CP006589.1; plasmid pHC:NZ_CP006590.1/CP006590.1	-	4	4236	4112	8/4/14	4/9/17	Complete Genome	Nanjing Agricultural University	SAMN02988321	GCA_000737515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/515/GCA_000737515.1_ASM73751v1	-	13-Apr
Comamonadaceae bacterium BICA1-1	1531963	PRJNA257561	257561	Proteobacteria	Betaproteobacteria	2.96792	65.9	-	JUEA01	128	2834	2589	12/16/14	3/24/15	Contig	EPFL	SAMN02953436	GCA_000802015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/015/GCA_000802015.1_ASM80201v1	-	-
Peptococcaceae bacterium BICA1-8	1531962	PRJNA257561	257561	Terrabacteria group	Firmicutes	3.97666	37.2	-	JUEF01	162	3932	3604	12/16/14	3/24/15	Contig	EPFL	SAMN02953438	GCA_000802045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/045/GCA_000802045.1_ASM80204v1	-	-
Desulfotomaculum sp. BICA1-6	1531959	PRJNA257561	257561	Terrabacteria group	Firmicutes	3.73567	48.4	-	JUED01	108	3507	3229	12/16/14	3/24/15	Contig	EPFL	SAMN02953437	GCA_000802115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/115/GCA_000802115.1_ASM80211v1	-	-
Halomonas hydrothermalis	115561	PRJNA267649	267649	Proteobacteria	Gammaproteobacteria	3.84233	60.2	-	JTDR01	35	3534	3423	12/9/14	4/17/17	Contig	CSIR-Central Salt and Marine Chemicals Research Institute	SAMN03199083	GCA_000800185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/185/GCA_000800185.1_HaloHydro1.0	25593258	MTCC 5445
Pseudomonas putida JB	1150601	PRJNA84349	84349	Proteobacteria	Gammaproteobacteria	5.84675	61.8	chromosome:NZ_CP016212.1/CP016212.1	-	1	5475	5273	10/18/16	4/5/17	Complete Genome	Institute of Molecular Genetics of the ASCR	SAMN05290347	GCA_001767335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/335/GCA_001767335.1_ASM176733v1	-	JB
Pseudomonas putida SJTE-1	1193499	PRJNA167271	167271	Proteobacteria	Gammaproteobacteria	6.0772	61.8	chromosome:NZ_CP015876.1/CP015876.1	-	1	5607	5408	6/2/16	4/5/17	Complete Genome	Shanghai Jiao Tong University	SAMN02470955	GCA_000271965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/965/GCA_000271965.2_ASM27196v2	22887678	SJTE-1
Candidatus Tremblaya princeps	189385	PRJEB12066	316505	Proteobacteria	Betaproteobacteria	0.13841	61.8	chromosome I:LN999011.1	-	1	168	136	3/26/16	3/26/16	Complete Genome	UNIVERSITY OF SOUTH BOHEMIA	SAMEA3723482	GCA_900019315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/315/GCA_900019315.1_TPMHIR	-	-
Mumia flava	1348852	PRJNA261102	261102	Terrabacteria group	Actinobacteria	16.3772	67.2	-	JTDJ01	923	15309	14156	12/16/14	1/26/16	Contig	University of Malaya	SAMN03070120	GCA_000802255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/255/GCA_000802255.1_ASM80225v1	-	MUSC 201
Microbacterium mangrovi	1348253	PRJNA261100	261100	Terrabacteria group	Actinobacteria	4.4166	70	-	JTDK01	55	4065	3957	12/16/14	4/10/17	Contig	University of Malaya	SAMN03070121	GCA_000802305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/305/GCA_000802305.1_ASM80230v1	-	MUSC 115
Porphyrobacter mercurialis	1572751	PRJNA266894	266894	Proteobacteria	Alphaproteobacteria	3.48234	67.3	-	JTDN01	10	3181	3079	12/16/14	4/9/17	Contig	UC Davis	SAMN03175121	GCA_000802385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/385/GCA_000802385.1_ASM80238v1	26586867	Coronado
Pseudomonas flexibilis	706570	PRJNA266854	266854	Proteobacteria	Gammaproteobacteria	3.7484	65.8	-	JTAK01	16	3517	3426	12/22/14	4/10/17	Contig	Korea University	SAMN03174901	GCA_000806415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/415/GCA_000806415.1_ASM80641v1	-	JCM 14085
Empedobacter falsenii	343874	PRJNA264840	264840	FCB group	Bacteroidetes/Chlorobi group	3.7135	32.1	-	JSYQ01	237	3497	3340	12/19/14	4/17/17	Contig	CSUF	SAMN03142989	GCA_000805695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/695/GCA_000805695.1_ASM80569v1	25838490	282
archaeon GW2011_AR6	1579368	PRJNA268032	268032	unclassified Archaea	unclassified Archaea (miscellaneous)	0.512955	42.8	-	JWKR01	10	625	625	12/19/14	12/19/14	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03217304	GCA_000805915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/915/GCA_000805915.1_ASM80591v1	-	-
archaeon GW2011_AR9	1579369	PRJNA268032	268032	unclassified Archaea	unclassified Archaea (miscellaneous)	0.486555	42.2	-	JWKS01	12	577	577	12/19/14	12/19/14	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03217305	GCA_000805935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/935/GCA_000805935.1_ASM80593v1	-	-
archaeon GW2011_AR16	1579374	PRJNA268032	268032	unclassified Archaea	unclassified Archaea (miscellaneous)	0.395366	43	-	JWKV01	10	426	425	12/19/14	12/19/14	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03217310	GCA_000805925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/925/GCA_000805925.1_ASM80592v1	-	-
archaeon GW2011_AR13	1579372	PRJNA268032	268032	unclassified Archaea	unclassified Archaea (miscellaneous)	0.943035	28.5	-	JWKU01	53	1161	1160	12/19/14	12/19/14	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03217308	GCA_000805965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/965/GCA_000805965.1_ASM80596v1	-	-
archaeon GW2011_AR17	1579375	PRJNA268032	268032	unclassified Archaea	unclassified Archaea (miscellaneous)	0.637001	34.2	-	JWKW01	26	797	796	12/19/14	12/19/14	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03217311	GCA_000805995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/995/GCA_000805995.1_ASM80599v1	-	-
archaeon GW2011_AR19	1579377	PRJNA268032	268032	unclassified Archaea	unclassified Archaea (miscellaneous)	0.678285	30.1	-	JWKY01	20	859	859	12/19/14	12/19/14	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03217313	GCA_000806015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/015/GCA_000806015.1_ASM80601v1	-	-
archaeon GW2011_AR21	1579379	PRJNA268032	268032	unclassified Archaea	unclassified Archaea (miscellaneous)	0.362948	43	-	JWKZ01	36	427	427	12/19/14	12/19/14	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03217315	GCA_000806035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/035/GCA_000806035.1_ASM80603v1	-	-
archaeon GW2011_AR1	1579364	PRJNA268032	268032	unclassified Archaea	unclassified Archaea (miscellaneous)	0.562091	30	-	JWKN01	25	728	728	12/19/14	12/19/14	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03217300	GCA_000806055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/055/GCA_000806055.1_ASM80605v1	-	-
archaeon GW2011_AR3	1579365	PRJNA268032	268032	unclassified Archaea	unclassified Archaea (miscellaneous)	0.992621	44.6	-	JWKO01	14	996	996	12/19/14	12/19/14	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03217301	GCA_000806075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/075/GCA_000806075.1_ASM80607v1	-	-
archaeon GW2011_AR4	1579366	PRJNA268032	268032	unclassified Archaea	unclassified Archaea (miscellaneous)	1.23335	44.8	-	JWKP01	19	1243	1243	12/19/14	12/19/14	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03217302	GCA_000806095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/095/GCA_000806095.1_ASM80609v1	-	-
archaeon GW2011_AR5	1579367	PRJNA268032	268032	unclassified Archaea	unclassified Archaea (miscellaneous)	0.858244	49	-	JWKQ01	3	1046	1028	12/19/14	12/19/14	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03217303	GCA_000806115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/115/GCA_000806115.1_ASM80611v1	-	-
archaeon GW2011_AR11	1579371	PRJNA268032	268032	unclassified Archaea	unclassified Archaea (miscellaneous)	0.916385	56.5	-	JWKT01	61	1009	1008	12/19/14	12/19/14	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03217307	GCA_000806135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/135/GCA_000806135.1_ASM80613v1	-	-
archaeon GW2011_AR18	1579376	PRJNA268032	268032	unclassified Archaea	unclassified Archaea (miscellaneous)	0.82254	29.7	-	JWKX01	17	1048	1047	12/19/14	12/19/14	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03217312	GCA_000806155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/155/GCA_000806155.1_ASM80615v1	-	-
Thalassospira australica	1528106	PRJNA257045	257045	Proteobacteria	Alphaproteobacteria	4.27033	53.6	-	JRJE01	32	3947	3848	10/3/14	4/9/17	Contig	University Miguel Hernandez	SAMN02947206	GCA_000763295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/295/GCA_000763295.1_ASM76329v1	-	NP3b2
Paraburkholderia fungorum	134537	PRJNA265859	265859	Proteobacteria	Betaproteobacteria	9.05898	61.7706	chromosome 1:NZ_CP010026.1/CP010026.1; chromosome 2:NZ_CP010027.1/CP010027.1; chromosome 3:NZ_CP010025.1/CP010025.1; plasmid pBIL:NZ_CP010024.1/CP010024.1	-	4	8206	7917	3/24/15	9/21/17	Complete Genome	Los Alamos National Laboratory	SAMN03174512	GCA_000961515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/515/GCA_000961515.1_ASM96151v1	25931592	-
Ponticoccus sp. SJ5A-1	1685382	PRJNA306724	306724	Proteobacteria	Alphaproteobacteria	4.56255	68	-	LPXO01	116	4395	4272	12/24/15	4/17/17	Contig	"Red Sea Research Center, Saudi Arabia"	SAMN04361754	GCA_001482405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/405/GCA_001482405.1_ASM148240v1	-	SJ5A-1
Flammeovirga pacifica	915059	PRJNA263711	263711	FCB group	Bacteroidetes/Chlorobi group	6.61033	33.1	-	JRYR02	21	5010	4870	12/26/14	4/17/17	Scaffold	85303	SAMN03105797	GCA_000807855.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/855/GCA_000807855.2_ASM80785v2	21669915	WPAGA1
Ketogulonicigenium vulgare Y25	880591	PRJNA51787	51787	Proteobacteria	Alphaproteobacteria	3.2884	61.7422	chromosome:NC_014625.1/CP002224.1; plasmid pYP1:NC_014621.1/CP002225.1; plasmid pYP12:NC_014626.1/CP002226.1	-	3	3286	2905	10/15/10	4/7/17	Complete Genome	Beijing Institute of Biotechnology	SAMN02603012	GCA_000164885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/885/GCA_000164885.1_ASM16488v1	21037005	Y25
Alteromonas marina	203795	PRJNA269560	269560	Proteobacteria	Gammaproteobacteria	4.31456	44.5	-	JWLW01	67	3735	3604	12/29/14	4/17/17	Contig	University of Malaya	SAMN03254451	GCA_000808575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/575/GCA_000808575.1_ASM80857v1	-	AD001
Bacillus thermotolerans	1221996	PRJNA268898	268898	Terrabacteria group	Firmicutes	3.80582	44.4	-	JWJE02	124	3825	3642	12/30/14	4/17/17	Contig	Institute of Microbial Technology	SAMN03258395	GCA_000812025.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/025/GCA_000812025.2_ASM81202v2	-	SGZ-8
Ketogulonicigenium vulgare	92945	PRJNA298454	298454	Proteobacteria	Alphaproteobacteria	3.27639	61.734	chromosome:NZ_CP012908.1/CP012908.1; plasmid 1:NZ_CP012909.1/CP012909.1; plasmid 2:NZ_CP012910.1/CP012910.1	-	3	3281	3178	10/19/15	4/11/17	Complete Genome	Tianjin University	SAMN04159244	GCA_001399515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/515/GCA_001399515.1_ASM139951v1	26979567	Hbe602
Chromobacterium piscinae	686831	PRJNA268264	268264	Proteobacteria	Betaproteobacteria	4.08956	62.6	-	JTGE01	223	3907	3705	12/31/14	4/17/17	Contig	UNIVERSITY OF MALAYA	SAMN03217650	GCA_000812585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/585/GCA_000812585.1_ASM81258v1	26941152	ND17
Halocynthiibacter namhaensis	1290553	PRJNA269555	269555	Proteobacteria	Alphaproteobacteria	3.53551	52.8	-	JWIF01	74	3596	3377	12/31/14	4/10/17	Contig	Korea Polar Research Institute	SAMN03254441	GCA_000812685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/685/GCA_000812685.1_S20958	24573327	RA2-3
Chromobacterium subtsugae	251747	PRJNA262860	262860	Proteobacteria	Betaproteobacteria	4.8056	64.8	-	JYKA01	76	4538	4402	6/27/16	4/5/17	Contig	USDA-ARS	SAMN03092257	GCA_001676875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/875/GCA_001676875.1_ASM167687v1	-	PRAA4-1
Belnapia sp. F-4-1	1545443	PRJNA260861	260861	Proteobacteria	Alphaproteobacteria	5.96228	69.7	-	JROR01	23	5646	5391	12/16/14	4/10/17	Scaffold	"Capital Normal University, China"	SAMN03072810	GCA_000802185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/185/GCA_000802185.1_ASM80218v1	-	F-4-1
Ketogulonicigenium vulgare WSH-001	759362	PRJNA48079	48079	Proteobacteria	Alphaproteobacteria	3.2771	61.7339	chromosome:NC_017384.1/CP002018.1; plasmid 1:NC_017386.1/CP002019.1; plasmid 2:NC_017385.1/CP002020.1	-	3	3198	3054	8/12/11	8/30/17	Complete Genome	Jiangnan University	SAMN02603460	GCA_000223375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/223/375/GCA_000223375.1_ASM22337v1	21994934	WSH-001
Novosphingobium malaysiense	1348853	PRJNA261103	261103	Proteobacteria	Alphaproteobacteria	5.02702	63.4	-	JTDI01	85	4683	4566	12/16/14	4/10/17	Contig	University of Malaya	SAMN03070119	GCA_000802225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/225/GCA_000802225.1_ASM80222v1	-	MUSC 273
Sinomonas sp. R1AF57	2020377	PRJNA394014	394014	Terrabacteria group	Actinobacteria	3.93987	71	chromosome:CP022463.1	-	1	3635	3513	7/24/17	7/24/17	Chromosome	USP	SAMN07346964	GCA_002224485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/485/GCA_002224485.1_ASM222448v1	-	R1AF57
Sinorhizobium meliloti	382	PRJNA388336	388336	Proteobacteria	Alphaproteobacteria	7.28182	61.7309	chromosome:NZ_CP021812.1/CP021812.1; plasmid accessoryA:NZ_CP021815.1/CP021815.1; plasmid accessoryB:NZ_CP021816.1/CP021816.1; plasmid accessoryC:NZ_CP021817.1/CP021817.1; plasmid psymA:NZ_CP021813.1/CP021813.1; plasmid psymB:NZ_CP021814.1/CP021814.1	-	6	7467	6557	6/16/17	8/7/17	Complete Genome	University of Minnesota	SAMN07175164	GCA_002197085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/085/GCA_002197085.1_ASM219708v1	-	M270
Chrysanthemum yellows phytoplasma	238674	PRJNA266098	266098	Terrabacteria group	Tenericutes	0.659699	28.3	-	JSWH01	252	651	546	12/18/14	4/17/17	Contig	Universita di Udine	SAMN03159445	GCA_000803325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/325/GCA_000803325.1_ASM80332v1	25636844	CYP
Pseudomonas putida ND6	231023	PRJNA162897	162897	Proteobacteria	Gammaproteobacteria	6.20245	61.7245	chromosome:NC_017986.1/CP003588.1; plasmid pND6-2:NC_018746.1/CP003589.1	-	2	5773	5548	5/29/12	5/19/17	Complete Genome	Department of Microbiology of Nankai University	SAMN02603188	GCA_000264665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/665/GCA_000264665.1_ASM26466v1	22933774	ND6
Mycobacterium setense	431269	PRJNA268140	268140	Terrabacteria group	Actinobacteria	6.26505	66.4	-	JTJW01	21	5963	5844	12/19/14	4/10/17	Contig	IMPPC (Institute of Predictive and Personalized Medicine of Cancer )	SAMN01174788	GCA_000805385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/385/GCA_000805385.1_ASM80538v1	25657273	DSM 45070
Pantoea rodasii	1076549	PRJNA268534	268534	Proteobacteria	Gammaproteobacteria	5.68029	53.7	-	JTJJ01	213	5459	5204	12/11/14	4/9/17	Contig	UNIVERSITY OF MALAYA	SAMN03220614	GCA_000801085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/085/GCA_000801085.1_ASM80108v1	-	ND03
Komagataeibacter europaeus	33995	PRJNA386757	386757	Proteobacteria	Alphaproteobacteria	3.79791	61.7094	chromosome:NZ_CP021467.1/CP021467.1; plasmid pKE1446-1:NZ_CP021468.1/CP021468.1; plasmid pKE1446-2:NZ_CP021469.1/CP021469.1; plasmid pKE1446-3:NZ_CP021470.1/CP021470.1	-	4	3505	3301	6/6/17	6/8/17	Complete Genome	Microbial Institiue for Fermentation Industry	SAMN07125940	GCA_002173515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/515/GCA_002173515.1_ASM217351v1	-	SRCM101446
Tepidimonas taiwanensis	307486	PRJNA266968	266968	Proteobacteria	Betaproteobacteria	2.9272	68.7	-	JTKY01	80	2720	2585	12/22/14	4/10/17	Scaffold	"University of Rome ""Foro Italico"""	SAMN03176936	GCA_000807215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/215/GCA_000807215.1_Tep_taiw_VT154-175	-	VT154-175
Chryseobacterium jeonii	266749	PRJNA265076	265076	FCB group	Bacteroidetes/Chlorobi group	3.26128	34.9	-	JSYL01	35	3034	2935	12/31/14	4/10/17	Contig	GCAT-SEEK	SAMN03145167	GCA_000812865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/865/GCA_000812865.1_ASM81286v1	-	DSM 17048
Chryseobacterium solincola	510955	PRJNA265074	265074	FCB group	Bacteroidetes/Chlorobi group	2.34524	39.5	-	JSYK01	14	2222	2164	12/31/14	4/17/17	Contig	GCAT-SEEK	SAMN03145166	GCA_000812875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/875/GCA_000812875.1_ASM81287v1	-	DSM 22468
Pedobacter kyungheensis	1069985	PRJNA265077	265077	FCB group	Bacteroidetes/Chlorobi group	6.35864	40.5	-	JSYN01	67	5395	5231	12/31/14	4/10/17	Contig	GCAT-SEEK	SAMN03145168	GCA_000812965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/965/GCA_000812965.1_ASM81296v1	-	KACC 16221
Bacillus selenatarsenatis SF-1	1321606	PRJDB1095	269694	Terrabacteria group	Firmicutes	4.75626	42.1	-	BASE01	145	4757	4607	12/6/14	4/17/17	Contig	Osaka University	SAMD00020551	GCA_000813125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/125/GCA_000813125.1_ASM81312v1	-	SF-1
Pseudomonas sp. CC6-YY-74	1930532	PRJNA376459	376459	Proteobacteria	Gammaproteobacteria	5.04079	61.7	chromosome:NZ_CP019947.1/CP019947.1	-	1	4583	4255	3/13/17	3/15/17	Complete Genome	"the First Institute of Oceanography, SOA"	SAMN06394991	GCA_002025205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/205/GCA_002025205.1_ASM202520v1	-	CC6-YY-74
Pseudomonas parafulva	157782	PRJNA376819	376819	Proteobacteria	Gammaproteobacteria	4.69078	61.7	chromosome:NZ_CP019952.1/CP019952.1	-	1	4246	4058	3/6/17	3/9/17	Complete Genome	China National Rice Research Institute	SAMN06447730	GCA_002021815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/815/GCA_002021815.1_ASM202181v1	-	PRS09-11288
Morococcus cerebrosus	1056807	PRJNA267751	267751	Proteobacteria	Betaproteobacteria	2.45191	51.4	-	JUFZ01	170	2528	2187	1/2/15	4/10/17	Scaffold	Korea University	SAMN03200160	GCA_000813705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/705/GCA_000813705.1_ASM81370v1	-	CIP 81.93
Brevundimonas nasdae	172043	PRJNA269640	269640	Proteobacteria	Alphaproteobacteria	3.40783	66	-	JWSY01	85	3375	3244	1/2/15	4/17/17	Contig	University of Malaya	SAMN03257121	GCA_000813765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/765/GCA_000813765.1_ASM81376v1	-	TPW30
Microbacterium hominis NBRC 15708	1348634	PRJDB1325	231382	Terrabacteria group	Actinobacteria	3.50268	71	-	BCWI01	52	3247	3144	3/4/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00047214	GCA_001592125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/125/GCA_001592125.1_ASM159212v1	-	NBRC 15708
Chryseobacterium taiwanense	363331	PRJNA269640	269640	FCB group	Bacteroidetes/Chlorobi group	4.12633	34.3	-	JWTA01	45	3764	3680	1/2/15	4/17/17	Contig	University of Malaya	SAMN03256218	GCA_000813825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/825/GCA_000813825.1_ASM81382v1	-	TPW19
Tateyamaria sp. ANG-S1	1577905	PRJNA269051	269051	Proteobacteria	Alphaproteobacteria	4.42558	60.6	-	JWLL01	32	4357	4221	1/2/15	4/10/17	Scaffold	University of Connecticut	SAMN03246068	GCA_000814025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/025/GCA_000814025.1_ASM81402v1	25755651	ANG-S1
Flavihumibacter sp. ZG627	1463156	PRJNA254095	254095	FCB group	Bacteroidetes/Chlorobi group	4.18363	43.3	-	JPHF01	55	3705	3626	1/5/15	4/10/17	Contig	Huazhong Agricultural University	SAMN02899690	GCA_000814325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/325/GCA_000814325.1_ASM81432v1	-	ZG627
Sulfurospirillum arsenophilum NBRC 109478	1349789	PRJDB1374	231430	Proteobacteria	delta/epsilon subdivisions	2.62998	39.2	-	BBQF01	11	2623	2564	12/13/14	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00023476	GCA_000813345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/345/GCA_000813345.1_ASM81334v1	-	NBRC 109478
Flavihumibacter solisilvae	1349421	PRJNA265817	265817	FCB group	Bacteroidetes/Chlorobi group	5.41066	47	-	JSVC01	75	4679	4588	1/5/15	4/10/17	Contig	Huazhong Agricultural University	SAMN03152361	GCA_000814475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/475/GCA_000814475.1_ASM81447v1	26388970	3-Mar
Prauserella sp. Am3	1515610	PRJNA253602	253602	Terrabacteria group	Actinobacteria	5.32587	70	-	JTJI01	46	4967	4907	1/5/15	4/26/16	Scaffold	University of New Hampshire	SAMN02873981	GCA_000814645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/645/GCA_000814645.1_ASM81464v1	-	Am3
Pseudoalteromonas elyakovii	81037	PRJNA268453	268453	Proteobacteria	Gammaproteobacteria	5.45452	43.3	-	JWIH01	25	4797	4575	1/5/15	4/17/17	Contig	University of Missouri	SAMN03220270	GCA_000814665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/665/GCA_000814665.1_ASM81466v1	25953181	ATCC 700519
Pseudoalteromonas distincta	77608	PRJNA268458	268458	Proteobacteria	Gammaproteobacteria	4.53275	39.2	-	JWIG01	32	4115	3888	1/5/15	4/17/17	Scaffold	University of Missouri	SAMN03220273	GCA_000814675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/675/GCA_000814675.1_ASM81467v1	25953181	ATCC 700518
Ketogulonicigenium vulgare	92945	PRJNA329562	329562	Proteobacteria	Alphaproteobacteria	3.03261	61.7	chromosome:NZ_CP017622.1/CP017622.1	-	1	3062	2947	10/27/16	4/13/17	Complete Genome	Shenyang Pharmaceutical University	SAMN05425368	GCA_001855295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/295/GCA_001855295.1_ASM185529v1	-	SPU B805
Steroidobacter denitrificans	465721	PRJNA287097	287097	Proteobacteria	Gammaproteobacteria	3.46725	61.7	chromosome:NZ_CP011971.1/CP011971.1	-	1	3128	3016	3/3/16	4/16/17	Complete Genome	Academia Sinica	SAMN03776156	GCA_001579945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/945/GCA_001579945.1_ASM157994v1	-	DSM 18526
Pseudomonas sp. URMO17WK12:I11	1283291	PRJEB9391	308089	Proteobacteria	Gammaproteobacteria	4.83535	61.7	chromosome 1:NZ_LN865164.1/LN865164.1	-	1	4395	4189	11/17/15	4/11/17	Complete Genome	SIB	SAMEA3393041	GCA_001511775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/775/GCA_001511775.1_YEL.embl.gz	-	-
Pseudomonas putida BIRD-1	931281	PRJNA54033	54033	Proteobacteria	Gammaproteobacteria	5.73154	61.7	chromosome:NC_017530.1/CP002290.1	-	1	5315	5110	12/3/10	5/19/17	Complete Genome	"Estacion Experimental del Zaidin, CSIC"	SAMN02603225	GCA_000183645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/645/GCA_000183645.1_ASM18364v1	21183676	BIRD-1
Ketogulonicigenium vulgare	92945	PRJNA329028	329028	Proteobacteria	Alphaproteobacteria	3.03252	61.6647	chromosome:NZ_CP016592.1/CP016592.1; plasmid pKvSKV1:NZ_CP016593.1/CP016593.1	-	2	3067	2851	7/26/16	4/13/17	Complete Genome	Tianjin University	SAMN05390006	GCA_001693655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/655/GCA_001693655.1_ASM169365v1	-	SKV
Haloarcula salaria	575195	PRJNA271197	271197	Euryarchaeota	Halobacteria	4.0915	62.1	-	JXAO01	191	-	-	1/6/15	1/6/15	Contig	Directorate of Groundnut Research (Indian Council of Agricultural Research)	SAMN03273288	GCA_000815385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/385/GCA_000815385.1_ASM81538v1	-	H5-DGR
Halomonas caseinilytica	438744	PRJDB4878	323837	Proteobacteria	Gammaproteobacteria	3.57164	63.4	-	BDEP01	38	3401	3294	6/1/16	4/12/17	Contig	Korea Polar Research Institute	SAMD00052839	GCA_001662305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/305/GCA_001662305.1_ASM166230v1	-	JCM 14802
Polaromonas naphthalenivorans CJ2	365044	PRJNA13418	13418	Proteobacteria	Betaproteobacteria	5.36614	61.6566	chromosome:NC_008781.1/CP000529.1; plasmid pPNAP01:NC_008757.1/CP000530.1; plasmid pPNAP02:NC_008758.1/CP000531.1; plasmid pPNAP03:NC_008759.1/CP000532.1; plasmid pPNAP04:NC_008760.1/CP000533.1; plasmid pPNAP05:NC_008761.1/CP000534.1; plasmid pPNAP06:NC_008762.1/CP000535.1; plasmid pPNAP07:NC_008763.1/CP000536.1; plasmid pPNAP08:NC_008764.1/CP000537.1	-	9	5066	4879	1/4/07	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02598302	GCA_000015505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/505/GCA_000015505.1_ASM1550v1	-	CJ2
Acinetobacter harbinensis	1353941	PRJNA271565	271565	Proteobacteria	Gammaproteobacteria	2.89979	41.7	-	JXBK01	6	2705	2488	1/8/15	4/6/17	Scaffold	Harbin Institute of Technology	SAMN03274949	GCA_000816495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/495/GCA_000816495.1_ASM81649v1	25744987	HITLi 7
Nitrobacter hamburgensis X14	323097	PRJNA13473	13473	Proteobacteria	Alphaproteobacteria	5.01152	61.6047	chromosome:NC_007964.1/CP000319.1; plasmid 1:NC_007959.1/CP000320.1; plasmid 2:NC_007960.1/CP000321.1; plasmid 3:NC_007961.1/CP000322.1	-	4	4899	4462	4/11/06	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02598307	GCA_000013885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/885/GCA_000013885.1_ASM1388v1	-	X14
Aquaspirillum sp. LM1	1938604	PRJNA363092	363092	Proteobacteria	Betaproteobacteria	3.96224	61.6	chromosome:NZ_CP019509.1/CP019509.1	-	1	3428	3280	2/17/17	4/17/17	Complete Genome	The University of Chicago	SAMN06256473	GCA_002002905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/905/GCA_002002905.1_ASM200290v1	-	LM1
Aeromonas aquatica	558964	PRJNA353572	353572	Proteobacteria	Gammaproteobacteria	4.7835	61.6	chromosome:NZ_CP018201.1/CP018201.1	-	1	4445	4208	12/9/16	4/16/17	Complete Genome	"Fisheries College, Jimei University"	SAMN06016471	GCA_001895965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/965/GCA_001895965.1_ASM189596v1	-	MX16A
marine actinobacterium MedAcidi-G2A	1550400	PRJNA257723	257723	Terrabacteria group	Actinobacteria	1.37439	43.1	-	JUEN01	48	1410	1146	1/9/15	2/25/15	Contig	Evolutionary Genomics Group (UMH-EGG)	SAMN03083479	GCA_000817095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/095/GCA_000817095.1_ASM81709v1	25670777	-
marine actinobacterium MedAcidi-G2B	1550401	PRJNA257723	257723	Terrabacteria group	Actinobacteria	1.44118	44.8	-	JUEO01	28	1447	1149	1/9/15	2/25/15	Contig	Evolutionary Genomics Group (UMH-EGG)	SAMN03083480	GCA_000817115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/115/GCA_000817115.1_ASM81711v1	25670777	-
marine actinobacterium MedAcidi-G3	1550402	PRJNA257723	257723	Terrabacteria group	Actinobacteria	2.10999	51.4	-	JUEP01	32	2090	1678	1/9/15	2/25/15	Contig	Evolutionary Genomics Group (UMH-EGG)	SAMN03083481	GCA_000817105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/105/GCA_000817105.1_ASM81710v1	25670777	-
marine actinobacterium MedAcidi-G1	1550399	PRJNA257723	257723	Terrabacteria group	Actinobacteria	1.6828	42.4	-	JUEM01	43	1719	1361	1/9/15	2/25/15	Contig	Evolutionary Genomics Group (UMH-EGG)	SAMN03083478	GCA_000817085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/085/GCA_000817085.1_ASM81708v1	25670777	-
Methylacidiphilum kamchatkense Kam1	1202785	PRJNA169117	169117	PVC group	Verrucomicrobia	2.21064	40.4	-	JQNX01	41	2091	1851	1/12/15	3/15/17	Contig	University of Bergen	SAMN02996356	GCA_000817245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/245/GCA_000817245.1_ASM81724v1	25745002	Kam1
Komagataeibacter intermedius AF2	1458464	PRJNA237213	237213	Proteobacteria	Alphaproteobacteria	4.46506	61.4	-	JUFX02	268	4239	3789	1/12/15	4/17/17	Scaffold	Centro Nacional de Pesquisa em Energia e Materiais	SAMN02615817	GCA_000817255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/255/GCA_000817255.2_ASM81725v2	26634755	AF2
Scytonema millei VB511283	1245923	PRJNA267760	267760	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.25412	43.5	-	JTJC02	250	6182	4950	1/13/15	4/13/17	Scaffold	Indian Institute Of Chemical biology	SAMN03200207	GCA_000817735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/735/GCA_000817735.2_ASM81773v2	25744984	VB511283
Aphanocapsa montana BDHKU210001	1574475	PRJNA268055	268055	Terrabacteria group	Cyanobacteria/Melainabacteria group	11.5	52.5	-	JTJD01	296	8667	7295	1/13/15	3/26/15	Scaffold	Indian Institute Of Chemical biology	SAMN03202139	GCA_000817745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/745/GCA_000817745.1_ASM81774v1	25744997	BDHKU210001
Hassallia byssoidea VB512170	1304833	PRJNA266752	266752	Terrabacteria group	Cyanobacteria/Melainabacteria group	13.0965	44.1	-	JTCM01	62	11656	10181	1/13/15	3/26/15	Scaffold	Indian Institute Of Chemical biology	SAMN03174155	GCA_000817785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/785/GCA_000817785.1_V1.0	25745001	VB512170
Lyngbya confervoides BDU141951	1574623	PRJNA268230	268230	Terrabacteria group	Cyanobacteria/Melainabacteria group	8.79969	55	-	JTHE01	298	7313	6378	1/13/15	4/17/17	Scaffold	Indian Institute Of Chemical biology	SAMN03217274	GCA_000817775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/775/GCA_000817775.1_ASM81777v1	25745003	BDU141951
Pseudomonas putida B6-2	1081940	PRJNA72885	72885	Proteobacteria	Gammaproteobacteria	6.37727	61.6	chromosome:NZ_CP015202.1/CP015202.1	-	1	5760	5515	5/6/16	6/3/16	Complete Genome	"State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University"	SAMN02470956	GCA_000226035.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/035/GCA_000226035.3_ASM22603v3	22072645	B6-2
Aeromonas hydrophila YL17	1448139	PRJNA234473	234473	Proteobacteria	Gammaproteobacteria	4.79628	61.6	chromosome:NZ_CP007518.2/CP007518.2	-	1	4392	4169	4/2/14	4/4/17	Complete Genome	UNIVERSITY OF MALAYA	SAMN02713488	GCA_000612075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/075/GCA_000612075.2_ASM61207v2	26941143	YL17
Pseudomonas putida H8234	1331671	PRJNA202087	202087	Proteobacteria	Gammaproteobacteria	6.87083	61.6	chromosome:NC_021491.1/CP005976.1	-	1	6512	6227	6/11/13	4/1/17	Complete Genome	Universidad de Huelva	SAMN02604103	GCA_000410575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/575/GCA_000410575.1_ASM41057v1	23868128	H8234
Candidatus Riesia pediculischaeffi	428411	PRJNA295781	295781	Proteobacteria	Gammaproteobacteria	0.571864	31.6491	chromosome:NZ_CP012839.1/CP012839.1; plasmid unnamed:NZ_CP012838.1/CP012838.1	-	2	521	458	3/29/17	4/1/17	Chromosome	University of Illinois Urbana-Champaign	SAMN04088564	GCA_002073895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/895/GCA_002073895.1_ASM207389v1	-	PTSK
Bacillaceae bacterium MTCC 10057	590062	PRJNA268897	268897	Terrabacteria group	Firmicutes	3.71653	44.2	-	JWIQ02	184	3834	3552	1/15/15	4/17/17	Contig	Institute of Microbial Technology	SAMN03253085	GCA_000818665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/665/GCA_000818665.2_ASM81866v2	-	MTCC 10057
Bacillaceae bacterium MTCC 8252	1123719	PRJNA268896	268896	Terrabacteria group	Firmicutes	3.96726	44.2	-	JWIR02	172	4043	3681	1/15/15	4/10/17	Contig	Institute of Microbial Technology	SAMN03253084	GCA_000818695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/695/GCA_000818695.2_ASM81869v2	-	MTCC 8252
Streptomyces nodosus	40318	PRJNA259817	259817	Terrabacteria group	Actinobacteria	7.71411	70.9	chromosome:NZ_CP009313.1/CP009313.1	-	1	6832	6276	1/16/15	3/14/17	Chromosome	University College Dublin	SAMN03020625	GCA_000819545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/545/GCA_000819545.1_ASM81954v1	26497174	ATCC 14899
Alcanivorax dieselolei B5	930169	PRJNA60443	60443	Proteobacteria	Gammaproteobacteria	4.92822	61.6	chromosome:NC_018691.1/CP003466.1	-	1	4467	4362	9/28/12	5/18/17	Complete Genome	"Third Institute of Oceanography, State Oceanic Administration"	SAMN02603961	GCA_000300005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/005/GCA_000300005.1_ASM30000v1	23144414	B5
Aeromonas allosaccharophila	656	PRJNA296464	296464	Proteobacteria	Gammaproteobacteria	4.58446	59	-	LKKI01	48	4189	3995	11/19/15	4/11/17	Contig	Texas Tech University	SAMN04099669	GCA_001446895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/895/GCA_001446895.1_ASM144689v1	26824353	TTU2014-159ASC
Aeromonas australiensis	1114880	PRJEB7021	267793	Proteobacteria	Gammaproteobacteria	4.11003	58.1	-	CDDH01	113	3780	3585	11/24/14	4/10/17	Contig	UCONNMISEQ	SAMEA2752426	GCA_000819725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/725/GCA_000819725.1_PRJEB7021	-	CECT 8023
Aeromonas bivalvium	440079	PRJEB7023	267795	Proteobacteria	Gammaproteobacteria	4.30259	62.2	-	CDBT01	63	3981	3765	11/24/14	4/17/17	Scaffold	UCONNMISEQ	SAMEA2752424	GCA_000819765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/765/GCA_000819765.1_PRJEB7023	-	CECT 7113
Aeromonas encheleia	73010	PRJEB7027	267798	Proteobacteria	Gammaproteobacteria	4.47253	62	-	CDDI01	35	4136	3970	11/24/14	4/17/17	Scaffold	UCONNMISEQ	SAMEA2752421	GCA_000819825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/825/GCA_000819825.1_PRJEB7027	-	CECT 4342
Aeromonas eucrenophila	649	PRJEB7029	267800	Proteobacteria	Gammaproteobacteria	4.54006	61.2	-	CDDF01	22	4149	3996	11/24/14	4/10/17	Scaffold	UCONNMISEQ	SAMEA2752419	GCA_000819865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/865/GCA_000819865.1_PRJEB7029	-	CECT 4224
Aeromonas fluvialis	591962	PRJEB7030	267801	Proteobacteria	Gammaproteobacteria	3.90423	58.3	-	CDBO01	76	3674	3408	11/24/14	4/17/17	Scaffold	UCONNMISEQ	SAMEA2752418	GCA_000819885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/885/GCA_000819885.1_PRJEB7030	-	LMG 24681
Salinicoccus roseus	45670	PRJNA272357	272357	Terrabacteria group	Firmicutes	2.55796	50	-	JXII01	14	2599	2518	1/16/15	4/17/17	Contig	"CAS Key Laboratory of Microbial Physiological and Metabolic Engineering, Institute of Microbiology"	SAMN03280976	GCA_000819905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/905/GCA_000819905.1_ASM81990v1	26358621	W12
Pseudomonas batumici	226910	PRJNA270768	270768	Proteobacteria	Gammaproteobacteria	6.6068	61.8	-	JXDG01	126	5932	5699	1/16/15	4/17/17	Contig	Institute of Microbiology and Virology	SAMN03273282	GCA_000820515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/515/GCA_000820515.1_ASM82051v1	-	UCM B-321
Enterobacteriaceae bacterium ATCC 29904	1593232	PRJNA244548	244548	Proteobacteria	Gammaproteobacteria	4.72135	54.8	-	JOUD01	2	4674	4435	9/17/14	4/10/17	Scaffold	Los Alamos National Laboratory	SAMN02867554	GCA_000755535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/535/GCA_000755535.1_ASM75553v1	-	ATCC 29904
Peptococcaceae bacterium BICA1-7	1531961	PRJNA257561	257561	Terrabacteria group	Firmicutes	4.74567	49.3	-	JUEB01	33	4377	3935	12/16/14	3/24/15	Contig	EPFL	SAMN02953213	GCA_000802095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/095/GCA_000802095.1_ASM80209v1	-	-
Clostridiaceae bacterium MS3	1329795	PRJEB1959	204995	Terrabacteria group	Firmicutes	7.75822	46.6	-	CCYG01	384	6895	6430	10/16/14	4/10/17	Contig	URMITE	SAMEA2820673	GCA_000820745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/745/GCA_000820745.1_Polynesia_massiliensis_MS3	-	MS3
Candidatus Soleaferrea massiliensis AP7	1211843	PRJEB375	172622	Terrabacteria group	Firmicutes	3.09859	53.2	-	CCYH01	51	2563	2485	10/16/14	4/10/17	Contig	URMITE	SAMEA2821497	GCA_000820765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/765/GCA_000820765.1_Arquibacterium_massiliensis_AP7	-	AP7
Candidatus Streptomyces massiliensis AP10	1211820	PRJEB378	172621	Terrabacteria group	Actinobacteria	7.40644	69.1	-	CCXT01	138	-	-	9/29/14	9/29/14	Scaffold	URMITE	SAMEA2785594	GCA_000820785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/785/GCA_000820785.2_Streptomyces_massiliensis_AP10	-	AP10
Pyrinomonas methylaliphatogenes	454194	PRJEB4906	272499	Acidobacteria	Blastocatellia	3.78856	59.4	-	CBXV01	16	3217	3127	1/13/15	4/16/17	Contig	GNS	SAMEA3158464	GCA_000820845.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/845/GCA_000820845.2_K22	24048862	type strain:K22
Chromohalobacter japonicus	223900	PRJEB5948	242463	Proteobacteria	Gammaproteobacteria	3.37507	61.1	-	CDGZ01	14	3129	2952	11/19/14	4/10/17	Contig	URMITE	SAMEA3134141	GCA_000821045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/045/GCA_000821045.1_Chromohalobacter_japonicus_CJ	-	CJ
Aeromonas popoffii	70856	PRJEB7034	267805	Proteobacteria	Gammaproteobacteria	4.76247	58.6	-	CDBI01	105	4458	4126	11/24/14	4/17/17	Scaffold	UCONNMISEQ	SAMEA2752414	GCA_000820025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/025/GCA_000820025.1_PRJEB7034	-	CIP 105493
Aeromonas rivuli	648794	PRJEB7035	267806	Proteobacteria	Gammaproteobacteria	4.53415	60	-	CDBJ01	102	4271	4040	11/24/14	4/17/17	Scaffold	UCONNMISEQ	SAMEA2752413	GCA_000820045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/045/GCA_000820045.1_PRJEB7035	-	DSM 22539
Aeromonas sanarellii	633415	PRJEB7037	267808	Proteobacteria	Gammaproteobacteria	4.1869	63.1	-	CDBN01	98	3905	3717	11/24/14	4/17/17	Scaffold	UCONNMISEQ	SAMEA2752411	GCA_000820085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/085/GCA_000820085.1_PRJEB7037	-	LMG 24682
Bordetella avium 197N	360910	PRJNA27	27	Proteobacteria	Betaproteobacteria	3.73225	61.6	chromosome:NC_010645.1/AM167904.1	-	1	3447	3317	2/1/06	5/28/17	Complete Genome	Sanger Institute	SAMEA1705952	GCA_000070465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/070/465/GCA_000070465.1_ASM7046v1	16885469	197N
Aeromonas simiae	218936	PRJEB7039	267810	Proteobacteria	Gammaproteobacteria	3.98769	61.3	-	CDBY01	100	3802	3551	11/24/14	4/17/17	Scaffold	UCONNMISEQ	SAMEA2752409	GCA_000820125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/125/GCA_000820125.1_PRJEB7039	-	CIP 107798
Aeromonas tecta	324617	PRJEB7042	267813	Proteobacteria	Gammaproteobacteria	4.75522	60.1	-	CDCA01	51	4380	4177	11/24/14	4/16/17	Scaffold	UCONNMISEQ	SAMEA2752406	GCA_000820185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/185/GCA_000820185.2_PRJEB7042	-	CECT 7082
Spiroplasma poulsonii	2138	PRJNA256019	256019	Terrabacteria group	Tenericutes	1.77186	26.6	-	JTLV01	12	1950	1533	1/16/15	4/17/17	Contig	Academia Sinica	SAMN03223654	GCA_000820525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/525/GCA_000820525.1_ASM82052v1	25827421	MSRO
Geoalkalibacter ferrihydriticus DSM 17813	1121915	PRJNA263164	263164	Proteobacteria	delta/epsilon subdivisions	3.83969	57.9	-	JWJD01	23	3500	3373	1/16/15	4/10/17	Scaffold	University of Minnesota	SAMN03097396	GCA_000820505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/505/GCA_000820505.1_ASM82050v1	25767222	DSM 17813
Aeromonas piscicola	600645	PRJNA323710	323710	Proteobacteria	Gammaproteobacteria	4.88688	59.8	-	LYXO01	82	4488	4290	7/13/16	4/13/17	Contig	Universitat de Barcelona	SAMN05187196	GCA_001684435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/684/435/GCA_001684435.1_ASM168443v1	-	AH-3
Oceanobacillus oncorhynchi	545501	PRJEB5950	242465	Terrabacteria group	Firmicutes	4.608	39.3	-	CDGG01	1	4451	4287	11/12/14	4/17/17	Contig	URMITE	SAMEA3111961	GCA_000821065.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/065/GCA_000821065.2_PRJEB5950_assembly_1	-	Oc5
Pseudomonas rhodesiae	76760	PRJEB16487	349369	Proteobacteria	Gammaproteobacteria	6.4178	60.2	chromosome I:NZ_LT629801.1/LT629801.1	-	1	5927	5729	10/21/16	4/13/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04490209	GCA_900105575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/575/GCA_900105575.1_IMG-taxon_2639763190_annotated_assembly	-	BS2777
Mesorhizobium plurifarium	69974	PRJEB6723	261146	Proteobacteria	Alphaproteobacteria	7.14034	63.8	-	CCNB01	46	6874	6650	9/15/14	4/10/17	Scaffold	IRD	SAMEA2677839	GCA_000824785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/785/GCA_000824785.1_Mesorhizobium_plurifarium_STM8773_genome_assembly	-	-
Pseudomonas xanthomarina	271420	PRJEB15821	347759	Proteobacteria	Gammaproteobacteria	4.33229	60.3	chromosome I:NZ_LT629970.1/LT629970.1	-	1	4008	3854	10/27/16	4/13/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216535	GCA_900108535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/535/GCA_900108535.1_IMG-taxon_2675902960_annotated_assembly	-	LMG 23572
Ehrlichia minasensis	1242993	PRJEB7416	268167	Proteobacteria	Alphaproteobacteria	1.41491	30.4	-	CDGH01	187	1056	953	11/24/14	4/10/17	Contig	ERA7	SAMEA2795788	GCA_000825765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/765/GCA_000825765.1_Assembly_of_Ehrlichia_mineirensis	25614563	UFMG-EV
Pseudomonas sp. VLB120	69328	PRJNA178195	178195	Proteobacteria	Gammaproteobacteria	5.96622	61.5304	chromosome:NC_022738.1/CP003961.1; plasmid pSTY:NC_022739.1/CP003962.1	-	2	5637	5430	11/1/13	4/17/17	Complete Genome	Bielefeld University	SAMN02603030	GCA_000494915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/915/GCA_000494915.1_ASM49491v1	25128338	VLB120
Nigerium massiliense	1522317	PRJEB7541	264166	Terrabacteria group	Actinobacteria	2.93426	70.4	-	CCYM01	3	2719	2573	10/18/14	4/10/17	Contig	URMITE	SAMEA2821752	GCA_000826085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/085/GCA_000826085.1_Nigerium_massiliensis_SIT7	-	SIT5
Sporosarcina koreensis	334735	PRJEB7548	264169	Terrabacteria group	Firmicutes	2.91243	54	-	CDGU01	8	2934	2825	11/19/14	4/10/17	Contig	URMITE	SAMEA2821851	GCA_000826145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/145/GCA_000826145.1_Sporosarcina_koreensis_S-K12	-	S-K12
Kibdelosporangium sp. MJ126-NF4	703222	PRJEB7742	272703	Terrabacteria group	Actinobacteria	11.7523	67.8	-	CDME01	21	10512	10211	1/14/15	4/16/17	Scaffold	National Center for Genome Resources (NCGR)	SAMEA3136170	GCA_000826545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/545/GCA_000826545.1_High_quaKibdelosporangium_sp._MJ126-NF4	-	MJ126-NF4
Psychroserpens mesophilus	325473	PRJNA255843	255843	FCB group	Bacteroidetes/Chlorobi group	3.6805	33.4	-	JXJP01	72	3284	3215	1/20/15	4/17/17	Contig	KORIA POLAR RESEARCH INSTITUTE	SAMN03160575	GCA_000826645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/645/GCA_000826645.1_ASM82664v1	25316694	JCM 13413
Psychroserpens damuponensis	943936	PRJNA255844	255844	FCB group	Bacteroidetes/Chlorobi group	3.94576	32.5	-	JXJO01	106	3543	3442	1/20/15	4/17/17	Contig	KORIA POLAR RESEARCH INSTITUTE	SAMN02929384	GCA_000826655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/655/GCA_000826655.1_ASM82665v1	25316694	JCM 17632
Streptomonospora alba	183763	PRJNA261521	261521	Terrabacteria group	Actinobacteria	5.91431	71.9	-	JROO01	111	5137	4894	1/20/15	4/17/17	Contig	University of Illinois at Urbana-Champaign	SAMN03074668	GCA_000826685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/685/GCA_000826685.1_ASM82668v1	25601074	YIM 90003
Antarctobacter heliothermus	74033	PRJNA380207	380207	Proteobacteria	Alphaproteobacteria	5.33119	61.5257	chromosome:NZ_CP022540.1/CP022540.1; plasmid pSMS3-1:NZ_CP022541.1/CP022541.1; plasmid pSMS3-2:NZ_CP022542.1/CP022542.1; plasmid pSMS3-3:NZ_CP022543.1/CP022543.1	-	4	5075	4833	7/31/17	8/3/17	Complete Genome	University of Gothenburg	SAMN07322657	GCA_002237555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/555/GCA_002237555.1_ASM223755v1	-	SMS3
Geobacter anodireducens	1340425	PRJNA315482	315482	Proteobacteria	delta/epsilon subdivisions	3.66601	61.5106	chromosome:NZ_CP014963.1/CP014963.1; plasmid pSD:NZ_CP014964.1/CP014964.1	-	2	3434	2802	4/22/16	4/12/17	Complete Genome	Zhejiang University	SAMN04562549	GCA_001628815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/815/GCA_001628815.1_ASM162881v1	27257213	SD-1
Tolypothrix campylonemoides VB511288	1245935	PRJNA271449	271449	Terrabacteria group	Cyanobacteria/Melainabacteria group	9.46844	45.1	-	JXCB01	61	8210	7510	1/26/15	4/17/17	Scaffold	Indian Institute Of Chemical biology	SAMN03274356	GCA_000828075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/075/GCA_000828075.2_ASM82807v2	25838485	VB511288
Scytonema tolypothrichoides VB-61278	1233231	PRJNA271448	271448	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.89327	43.2	-	JXCA01	31	6634	6058	1/26/15	4/16/17	Scaffold	Indian Institute Of Chemical biology	SAMN03274355	GCA_000828085.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/085/GCA_000828085.2_ASM82808v2	25838486	VB-61278
Rickettsia asembonensis	1068590	PRJNA271102	271102	Proteobacteria	Alphaproteobacteria	1.37674	32.2764	plasmid pRAS01:NZ_CP011517.1/CP011517.1	JWSW01	88	1605	1221	1/26/15	9/25/17	Contig	Naval Medical Research Center	SAMN03272870	GCA_000828125.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/125/GCA_000828125.2_ASM82812v2	25767219	NMRCii
Comamonas testosteroni P19	1191062	PRJEB10031	297416	Proteobacteria	Betaproteobacteria	5.64935	61.5015	chromosome I:NZ_LN879547.1/LN879547.1; plasmid II:NZ_LN879548.1/LN879548.1	-	2	5207	5025	9/29/15	4/4/17	Complete Genome	JEJU NATIONAL UNIVERSITY	SAMEA3493917	GCA_001406795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/795/GCA_001406795.1_Comamonas_testosteroni_P19	-	-
Aeromonas dhakensis	196024	PRJNA400818	400818	Proteobacteria	Gammaproteobacteria	4.86805	61.5	chromosome:NZ_CP023141.1/CP023141.1	-	1	4486	4279	9/5/17	9/7/17	Complete Genome	Korea Research Institute of Bioscience & Biotechnology	SAMN07577462	GCA_002285935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/935/GCA_002285935.1_ASM228593v1	-	KN-Mc-6U21
Alcanivorax xenomutans	1094342	PRJNA161089	161089	Proteobacteria	Gammaproteobacteria	4.73395	61.5	chromosome:NZ_CP012331.1/CP012331.1	-	1	4388	4275	3/27/17	4/18/17	Complete Genome	The Third Institute of State Oceanic Administration (SOA)	SAMN03965495	GCA_002072815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/815/GCA_002072815.1_ASM207281v1	-	P40
Neoasaia chiangmaiensis	320497	PRJNA311264	311264	Proteobacteria	Alphaproteobacteria	3.40786	61.5	chromosome:NZ_CP014691.1/CP014691.1	-	1	3210	3051	2/22/17	2/24/17	Complete Genome	Technische Universitaet Muenchen	SAMN04396918	GCA_002005465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/465/GCA_002005465.1_ASM200546v1	-	NBRC 101099
Caulobacteraceae bacterium OTSz_A_272	1759059	PRJNA302799	302799	Proteobacteria	Alphaproteobacteria	3.73272	61.5	chromosome:NZ_CP013244.1/CP013244.1	-	1	3874	3786	7/5/16	4/13/17	Complete Genome	Eisenbakterien Odertal	SAMN04279642	GCA_001679665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/665/GCA_001679665.1_ASM167966v1	-	OTSz_A_272
Phaeobacter gallaeciensis	60890	PRJNA316055	316055	Proteobacteria	Alphaproteobacteria	4.06173	61.5	chromosome:NZ_CP015124.1/CP015124.1	-	1	3829	3729	7/5/16	4/13/17	Complete Genome	Xiamen University	SAMN04574079	GCA_001678945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/945/GCA_001678945.1_ASM167894v1	-	JL2886
Herbaspirillum rubrisubalbicans M1	1078773	PRJNA72471	72471	Proteobacteria	Betaproteobacteria	5.61126	61.5	chromosome:NZ_CP013737.1/CP013737.1	-	1	4876	4722	1/4/16	4/11/17	Complete Genome	National Institute of Science and Technology of Biological Nitrogen Fixation/Federal University of Paraná	SAMN04334956	GCA_001483945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/483/945/GCA_001483945.1_ASM148394v1	-	M1
Rathayibacter toxicus	145458	PRJNA298401	298401	Terrabacteria group	Actinobacteria	2.34603	61.5	chromosome:NZ_CP013292.1/CP013292.1	-	1	2165	2069	12/14/15	4/11/17	Complete Genome	Kansas State University	SAMN04158992	GCA_001465855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/465/855/GCA_001465855.1_ASM146585v1	-	WAC3373
Aeromonas schubertii	652	PRJNA297116	297116	Proteobacteria	Gammaproteobacteria	4.40003	61.5	chromosome:NZ_CP013067.1/CP013067.1	-	1	4268	3854	11/23/15	4/11/17	Complete Genome	"Pearl River Fishery Research Institute, Chinese Academy of Fishery Sciences"	SAMN04110141	GCA_001447335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/447/335/GCA_001447335.1_ASM144733v1	26798095	WL1483
Altererythrobacter epoxidivorans	361183	PRJNA290561	290561	Proteobacteria	Alphaproteobacteria	2.78626	61.5	chromosome:NZ_CP012669.1/CP012669.1	-	1	2758	2690	9/14/15	4/16/17	Complete Genome	"Second Institute of Oceanography, State Oceanic Administration"	SAMN03896005	GCA_001281485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/485/GCA_001281485.1_ASM128148v1	-	CGMCC 1.7731
Rathayibacter toxicus	145458	PRJNA257008	257008	Terrabacteria group	Actinobacteria	2.32829	61.5	chromosome:NZ_CP010848.1/CP010848.1	-	1	2154	2058	2/13/15	4/10/17	Complete Genome	µFORGE	SAMN03292448	GCA_000875675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/875/675/GCA_000875675.1_ASM87567v1	-	70137
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1	1048834	PRJNA68273	68273	Terrabacteria group	Firmicutes	3.12405	61.5	chromosome:NC_017167.1/CP002902.1	-	1	3113	2850	7/5/11	4/7/17	Complete Genome	"Key Laboratory of Genome Science and Information, Beijing Institute of Genomics, Chinese Academy of Sciences"	SAMN02603470	GCA_000219875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/875/GCA_000219875.1_ASM21987v1	21914900	Tc-4-1
Aeromonas hydrophila subsp. hydrophila ATCC 7966	380703	PRJNA16697	16697	Proteobacteria	Gammaproteobacteria	4.74445	61.5	chromosome:NC_008570.1/CP000462.1	-	1	4283	4118	11/6/06	5/21/17	Complete Genome	TIGR	SAMN02604052	GCA_000014805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/805/GCA_000014805.1_ASM1480v1	16980456	ATCC 7966
Pseudomonas putida KT2440	160488	PRJNA267	267	Proteobacteria	Gammaproteobacteria	6.18187	61.5	chromosome:NC_002947.4/AE015451.2	-	1	5786	5564	2/14/02	8/3/16	Complete Genome	TIGR	SAMN02603999	GCA_000007565.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/565/GCA_000007565.2_ASM756v2	"1,253,446,326,913,970"	KT2440
Komagataeibacter nataicola	265960	PRJNA371394	371394	Proteobacteria	Alphaproteobacteria	3.7603	61.4817	chromosome:NZ_CP019875.1/CP019875.1; plasmid pKNA01:NZ_CP019876.1/CP019876.1; plasmid pKNA02:NZ_CP019877.1/CP019877.1; plasmid pKNA03:NZ_CP019878.1/CP019878.1; plasmid pKNA04:NZ_CP019879.1/CP019879.1; plasmid pKNA05:NZ_CP019880.1/CP019880.1; plasmid pKNA06:NZ_CP019881.1/CP019881.1	-	7	3510	3250	3/2/17	3/9/17	Complete Genome	Nanjing University of Science and Technology	SAMN06368327	GCA_002009295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/295/GCA_002009295.1_ASM200929v1	-	RZS01
Jeotgalibacillus alimentarius	135826	PRJNA259403	259403	Terrabacteria group	Firmicutes	3.36475	43.1	-	JXRQ01	32	3468	3372	1/27/15	4/17/17	Contig	Universiti Teknologi Malaysia	SAMN03005142	GCA_000829445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/445/GCA_000829445.1_ASM82944v1	26494670	YKJ-13
Jeotgalibacillus soli Cunha et al. 2012	889306	PRJNA259404	259404	Terrabacteria group	Firmicutes	3.77695	39.7	-	JXRP01	24	3752	3554	1/27/15	4/17/17	Contig	Universiti Teknologi Malaysia	SAMN03005144	GCA_000829435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/435/GCA_000829435.1_ASM82943v1	25999554	P9
Cohnella sp. 6021052837	1816691	PRJEB19972	379096	Terrabacteria group	Firmicutes	6.32727	57.2	-	FWCJ01	19	5723	5485	3/18/17	4/3/17	Scaffold	URMITE	SAMEA103910524	GCA_900169535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/535/GCA_900169535.1_PRJEB19972	-	6021052837
Beduini massiliensis	1585974	PRJEB8288	273462	Terrabacteria group	Firmicutes	2.85059	35.9	-	CDPP01	6	2810	2690	1/23/15	4/10/17	Contig	URMITE	SAMEA3216842	GCA_000829905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/905/GCA_000829905.1_Beduini_massiliensis_GM1	-	GM1
Pseudomonas putida S12	1215087	PRJNA222630	222630	Proteobacteria	Gammaproteobacteria	6.38243	61.4432	chromosome:NZ_CP009974.1/CP009974.1; plasmid pTTS12:NZ_CP009975.1/CP009975.1	-	2	5964	5738	12/18/14	4/3/17	Complete Genome	RWTH Aachen University	SAMN02470872	GCA_000495455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/455/GCA_000495455.2_ASM49545v2	-	S12
Rhizobium phaseoli	396	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.6307	61.4357	chromosome:NZ_CP013542.1/CP013542.1; plasmid pRphaR620a:NZ_CP013543.1/CP013543.1; plasmid pRphaR620b:NZ_CP013544.1/CP013544.1; plasmid pRphaR620c:NZ_CP013545.1/CP013545.1; plasmid pRphaR620d:NZ_CP013546.1/CP013546.1	-	5	6463	6176	6/17/16	4/5/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN03998632	GCA_001664245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/245/GCA_001664245.1_ASM166424v1	-	R620
archaeon GW2011_AR15	1579373	PRJNA268032	268032	unclassified Archaea	unclassified Archaea (miscellaneous)	1.15779	42.5	chromosome:CP010425.1	-	1	1348	1308	1/29/15	9/21/17	Chromosome	"Banfield Lab, University of California, Berkeley"	SAMN03217309	GCA_000830295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/295/GCA_000830295.1_ASM83029v1	-	-
Rhizobium sp. N324	1703969	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.97259	61.4303	chromosome RspN324:NZ_CP013630.1/CP013630.1; plasmid pRspN324a:NZ_CP013631.1/CP013631.1; plasmid pRspN324b:NZ_CP013632.1/CP013632.1; plasmid pRspN324c:NZ_CP013633.1/CP013633.1; plasmid pRspN324d:NZ_CP013634.1/CP013634.1; plasmid pRspN324e:NZ_CP013635.1/CP013635.1	-	6	6760	6414	6/17/16	4/12/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN03998646	GCA_001664485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/485/GCA_001664485.1_ASM166448v1	-	N324
Vibrio mytili	50718	PRJNA272741	272741	Proteobacteria	Gammaproteobacteria	4.61082	44.4	-	JXOK01	95	4226	3591	1/30/15	4/17/17	Contig	"CIAD, A.C. Mazatlan Unit for Aquaculture"	SAMN03285415	GCA_000830505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/505/GCA_000830505.1_ASM83050v1	-	CAIM 528
Rhizobium phaseoli	396	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.74075	61.4074	chromosome:NZ_CP013580.1/CP013580.1; plasmid pRphaN261a:NZ_CP013581.1/CP013581.1; plasmid pRphaN261b:NZ_CP013582.1/CP013582.1; plasmid pRphaN261c:NZ_CP013583.1/CP013583.1; plasmid pRphaN261d:NZ_CP013584.1/CP013584.1	-	5	6569	6242	6/17/16	4/5/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN03998625	GCA_001664105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/105/GCA_001664105.1_ASM166410v1	-	N261
Rhizobium phaseoli	396	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.74074	61.4074	chromosome:NZ_CP013527.1/CP013527.1; plasmid pRphaR723a:NZ_CP013528.1/CP013528.1; plasmid pRphaR723b:NZ_CP013529.1/CP013529.1; plasmid pRphaR723c:NZ_CP013530.1/CP013530.1; plasmid pRphaR723d:NZ_CP013531.1/CP013531.1	-	5	6566	6241	6/17/16	4/5/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN03998635	GCA_001664225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/225/GCA_001664225.1_ASM166422v1	-	R723
Sulfuricaulis limicola	1620215	PRJDB3927	335881	Proteobacteria	Gammaproteobacteria	2.86467	61.4	chromosome:AP014879.1	-	1	2812	2763	7/29/16	9/17/16	Complete Genome	"The Institute of Low Temperature Science, Hokkaido University"	SAMD00031266	GCA_002355735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/735/GCA_002355735.1_ASM235573v1	-	HA5
Hyphomonas atlantica	1280948	PRJNA186162	186162	Proteobacteria	Alphaproteobacteria	3.60444	58.2	-	AWFH01	63	3492	3403	5/6/14	4/9/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02746323	GCA_000682715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/715/GCA_000682715.1_SOAPdenovo_v1.05	25070064	22II1-22F38
Parachlamydiaceae bacterium HS-T3	1314958	PRJDB3331	270915	PVC group	Chlamydiae	2.30789	38.7	-	BBPT01	34	2096	2025	12/19/14	3/22/17	Contig	Hokkaido University	SAMD00023373	GCA_000829755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/755/GCA_000829755.1_ASM82975v1	25657277	HS-T3
Marinomonas profundimaris	1208321	PRJNA170395	170395	Proteobacteria	Gammaproteobacteria	3.83337	44.8	-	AYOZ01	62	3617	3512	12/16/13	4/17/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02471158	GCA_000508165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/165/GCA_000508165.1_SOAPdenovo_for_version_v2.01_of_the_Marinomonas_sp._D104_genome	24459272	D104
Roseivivax atlanticus	1317118	PRJNA196735	196735	Proteobacteria	Alphaproteobacteria	4.63888	67.5	-	AQQW01	64	4312	4157	1/15/14	4/9/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02597437	GCA_000520615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/615/GCA_000520615.1_SOAPdenovo_v1.05	24567080	22II-s10s
Hyphomonas chukchiensis	1280947	PRJNA186160	186160	Proteobacteria	Alphaproteobacteria	3.85763	61	-	AWFG01	106	3766	3656	5/6/14	4/9/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02746322	GCA_000682695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/695/GCA_000682695.1_SOAPdenovo_v1.05	25070064	BH-BN04-4
Hyphomonas beringensis	1280946	PRJNA186158	186158	Proteobacteria	Alphaproteobacteria	3.80276	58.4	-	AWFF01	119	3619	3506	5/6/14	4/9/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02746321	GCA_000682755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/755/GCA_000682755.1_SOAPdenovo_v1.05	25070064	25B14_1
Nocardia vulneris	1141657	PRJNA248569	248569	Terrabacteria group	Actinobacteria	9.33764	68.1	-	JNFP01	137	8452	8229	12/29/14	4/10/17	Contig	Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures	SAMN02799571	GCA_000811985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/985/GCA_000811985.1_ASM81198v1	25015412	W9851
Jeotgalibacillus campisalis	220754	PRJNA259572	259572	Terrabacteria group	Firmicutes	3.65049	41.1	-	JXRR01	24	3604	3484	1/27/15	4/17/17	Contig	Universiti Teknologi Malaysia	SAMN03009544	GCA_000829515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/515/GCA_000829515.1_ASM82951v1	-	SF-57
Bacillus badius	1455	PRJNA271418	271418	Terrabacteria group	Firmicutes	4.04283	43.9	-	JXLP01	51	4184	4000	1/27/15	4/10/17	Contig	Institute of Microbial Technology	SAMN03282440	GCA_000829535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/535/GCA_000829535.1_ASM82953v1	-	MTCC 1458
Nonlabens marinus S1-08	1454201	PRJDB1596	241505	FCB group	Bacteroidetes/Chlorobi group	2.91592	39.7	chromosome:NZ_AP014548.1/AP014548.1	-	1	2680	2614	3/18/14	4/17/17	Chromosome	"Atmosphere and Ocean Research Institute, Univ. Tokyo"	SAMD00061027	GCA_000831385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/385/GCA_000831385.1_ASM83138v1	24706784	S1-08
Synechococcus sp. KORDI-49	585423	PRJNA207983	207983	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.58581	61.4	chromosome:NZ_CP006270.1/CP006270.1	-	1	2618	2528	8/4/14	4/17/17	Complete Genome	Korea Institute of Ocean Science and Technology	SAMN02202184	GCA_000737575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/575/GCA_000737575.1_ASM73757v1	-	KORDI-49
Gilvimarinus agarilyticus	679259	PRJNA271370	271370	Proteobacteria	Gammaproteobacteria	4.19084	53.1	-	JXCJ01	2	3619	3495	2/3/15	4/17/17	Scaffold	Korea Institute of Ocean Sciences	SAMN03274188	GCA_000832015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/015/GCA_000832015.1_ASM83201v1	-	JEA5
Flavobacterium hibernum	37752	PRJNA255948	255948	FCB group	Bacteroidetes/Chlorobi group	5.28367	33.2	-	JPRK01	30	4519	4419	2/3/15	4/17/17	Contig	GCAT-SEEK	SAMN02934118	GCA_000832125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/125/GCA_000832125.1_ASM83212v1	-	DSM 12611
Wolbachia endosymbiont of Dactylopius coccus	1605993	PRJNA274701	274701	Proteobacteria	Alphaproteobacteria	1.17064	35.1	-	LSYX01	157	1220	984	5/19/16	4/12/17	Contig	Universidad Nacional Autonoma de Mexico	SAMN03330030	GCA_001648025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/025/GCA_001648025.1_ASM164802v1	-	wDacA
Rickettsia hoogstraalii	467174	PRJEB7296	261415	Proteobacteria	Alphaproteobacteria	1.48481	32.4	-	CCXM01	2	1660	1291	9/23/14	4/10/17	Contig	URMITE	SAMEA2771239	GCA_000825685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/685/GCA_000825685.1_Rickettsia_hoogstraalii_Croatica	-	Croatica
Pseudomonas putida DOT-T1E	1196325	PRJNA167844	167844	Proteobacteria	Gammaproteobacteria	6.2607	61.4	chromosome:CP003734.1	-	1	5803	5721	7/24/12	1/30/14	Complete Genome	EEZ-CSIC	SAMN02603217	GCA_000281215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/215/GCA_000281215.1_ASM28121v1	-	DOT-T1E
Desulfovibrio africanus str. Walvis Bay	690850	PRJNA52831	52831	Proteobacteria	delta/epsilon subdivisions	4.20053	61.4	chromosome:NC_016629.1/CP003221.1	-	1	3865	3767	1/4/12	5/18/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713616	GCA_000212675.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/212/675/GCA_000212675.2_ASM21267v2	21642452	Walvis Bay
Anoxybacillus ayderensis	265546	PRJNA258494	258494	Terrabacteria group	Firmicutes	2.83235	41.8	-	JXTG01	74	3000	2779	2/9/15	4/17/17	Contig	Universiti Teknologi Malaysia	SAMN03003524	GCA_000833605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/605/GCA_000833605.1_ASM83360v1	26413199	AB04
Kitasatospora griseola	2064	PRJNA274276	274276	Terrabacteria group	Actinobacteria	7.96616	72.7	-	JXZB01	8	7159	6759	2/12/15	4/16/17	Contig	University of Prince Edward Island	SAMN03324877	GCA_000836635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/836/635/GCA_000836635.1_ASM83663v1	25814608	MF730-N6
Anoxybacillus thermarum	404937	PRJNA260786	260786	Terrabacteria group	Firmicutes	2.73691	42	-	JXTH01	159	3020	2681	2/12/15	4/17/17	Contig	Universiti Teknologi Malaysia	SAMN03078685	GCA_000836725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/836/725/GCA_000836725.1_ASM83672v1	25999577	AF/04
Comamonas testosteroni CNB-2	688245	PRJNA29203	29203	Proteobacteria	Betaproteobacteria	5.37364	61.4	chromosome:NC_013446.2/CP001220.2	-	1	4939	4707	10/29/09	4/2/17	Complete Genome	"Environmental Microbiology Research Center,Institute of Microbiology,Chinese Academy of Sciences"	SAMN02603356	GCA_000093145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/093/145/GCA_000093145.2_ASM9314v2	19734336	CNB-1 substr. CNB-2
Staphylococcus gallinarum	1293	PRJNA271859	271859	Terrabacteria group	Firmicutes	3.17172	33	-	JXCF01	272	2979	2864	2/13/15	4/10/17	Contig	Zhejiang University	SAMN03278263	GCA_000875895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/875/895/GCA_000875895.1_ASM87589v1	26044428	DSM 20610
Lachnospiraceae bacterium TWA4	1392836	PRJNA217373	217373	Terrabacteria group	Firmicutes	3.20162	34.9	-	JPZU01	46	3027	2644	2/13/15	4/10/17	Scaffold	"CSIRO Animal, Food and Health Sciences"	SAMN02991544	GCA_000875945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/875/945/GCA_000875945.1_TWA4_1	25495654	TWA4
Pseudomonas abietaniphila	89065	PRJDB3358	274630	Proteobacteria	Gammaproteobacteria	6.93002	59.4	-	BBQR01	97	6332	6125	2/4/15	4/10/17	Contig	National Institute of Advanced Industrial Science and Technology (AIST)	SAMD00023465	GCA_000876035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/035/GCA_000876035.1_ASM87603v1	-	KF717
Frigoribacterium sp. Leaf8	1735673	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.32857	71.3	-	LMKB01	12	3094	3002	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151577	GCA_001421165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/165/GCA_001421165.1_Leaf8	26633631	Leaf8
Jannaschia aquimarina	935700	PRJNA274650	274650	Proteobacteria	Alphaproteobacteria	4.09895	66.4	-	JYFE01	81	4057	3926	2/18/15	4/17/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03329626	GCA_000877395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/395/GCA_000877395.1_ASM87739v1	25908144	GSW-M26
Micromonospora carbonacea	47853	PRJEB14517	326384	Terrabacteria group	Actinobacteria	7.94193	73.8	-	FMCT01	51	6942	6649	8/15/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488106	GCA_900091535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/535/GCA_900091535.1_IMG-taxon_2622736592_annotated_assembly	-	DSM 43168
Mycobacterium llatzerense	280871	PRJNA273763	273763	Terrabacteria group	Actinobacteria	6.09159	66.6	-	JXST01	103	5890	5715	2/19/15	4/10/17	Contig	UCSF	SAMN03295723	GCA_000878195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/195/GCA_000878195.1_ASM87819v1	25926490	CLUC14
Pseudomonas putida W619	390235	PRJNA17053	17053	Proteobacteria	Gammaproteobacteria	5.77433	61.4	chromosome:NC_010501.1/CP000949.1	-	1	5378	5196	3/11/08	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598376	GCA_000019445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/445/GCA_000019445.1_ASM1944v1	-	W619
Rhizobium phaseoli	396	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.66205	61.3994	chromosome:NZ_CP013522.1/CP013522.1; plasmid pRphaR744a:NZ_CP013523.1/CP013523.1; plasmid pRphaR744b:NZ_CP013524.1/CP013524.1; plasmid pRphaR744c:NZ_CP013525.1/CP013525.1; plasmid pRphaR744d:NZ_CP013526.1/CP013526.1	-	5	6443	6161	6/17/16	4/5/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN03998636	GCA_001664185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/185/GCA_001664185.1_ASM166418v1	-	R744
Aneurinibacillus migulanus	47500	PRJNA291108	291108	Terrabacteria group	Firmicutes	6.34899	43.1	-	LGUG01	28	6385	6063	8/26/15	4/4/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN03940008	GCA_001274715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/274/715/GCA_001274715.1_ASM127471v1	26494674	DSM 2895
Rhizobium phaseoli Brasil 5	526949	PRJNA29557	29557	Proteobacteria	Alphaproteobacteria	6.66545	61.3953	chromosome:NZ_CP020896.1/CP020896.1; plasmid pRetBra5b:NZ_CP020898.1/CP020898.1; plasmid pRphaBra5a:NZ_CP020897.1/CP020897.1; plasmid pRphaBra5c:NZ_CP020899.1/CP020899.1; plasmid pRphaBra5d:NZ_CP020900.1/CP020900.1	-	5	6527	6186	4/21/17	7/19/17	Complete Genome	"Centro de Ciencias Genomicas, Universidad Nacional Autonoma de Mexico"	SAMN02469449	GCA_000172715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/715/GCA_000172715.2_ASM17271v2	-	Brasil 5
Mastigocladus laminosus UU774	1594576	PRJNA272369	272369	Terrabacteria group	Cyanobacteria/Melainabacteria group	8.56018	45.5	-	JXIJ01	174	6825	5550	2/25/15	4/10/17	Scaffold	Indian Institute Of Chemical biology	SAMN03281003	GCA_000934435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/435/GCA_000934435.1_ASM93443v1	-	UU774
Staphylococcus microti	569857	PRJNA274164	274164	Terrabacteria group	Firmicutes	2.38186	38	-	JXWY01	186	2251	2143	2/25/15	4/17/17	Contig	Zhejiang University	SAMN03323319	GCA_000934465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/465/GCA_000934465.1_ASM93446v1	-	DSM 22147
Pelagibacterium halotolerans B2	1082931	PRJNA72927	72927	Proteobacteria	Alphaproteobacteria	3.94889	61.3946	chromosome:NC_016078.1/CP003075.1; plasmid pPHB2:NC_016079.1/CP003076.1	-	2	3861	3758	10/14/11	4/17/17	Complete Genome	Zhejiang University	SAMN02604343	GCA_000230555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/555/GCA_000230555.1_ASM23055v1	22156395	B2
Acidithiobacillus caldus ATCC 51756	637389	PRJNA36585	36585	Proteobacteria	Acidithiobacillia	2.98705	61.3938	chromosome:NZ_CP005986.1/CP005986.1; plasmid megaplasmid mpAca1.1:NZ_CP005987.1/CP005987.1; plasmid pACA1.1:NZ_CP005988.1/CP005988.1; plasmid pACA1.2:NZ_CP005989.1/CP005989.1	-	4	3005	2849	5/27/14	4/10/17	Complete Genome	Center for Bioinformatics and Genome Biology	SAMN02469802	GCA_000175575.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/575/GCA_000175575.2_ASM17557v2	19617360	ATCC 51756
Rhizobium phaseoli	396	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.72033	61.3846	chromosome:NZ_CP013585.1/CP013585.1; plasmid pRphaN161a:NZ_CP013586.1/CP013586.1; plasmid pRphaN161b:NZ_CP013587.1/CP013587.1; plasmid pRphaN161c:NZ_CP013588.1/CP013588.1; plasmid pRphaN161d:NZ_CP013589.1/CP013589.1	-	5	6554	6224	6/17/16	4/5/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN03998624	GCA_001664165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/165/GCA_001664165.1_ASM166416v1	-	N161
Methylococcaceae bacterium 73a	1495050	PRJNA245748	245748	Proteobacteria	Gammaproteobacteria	4.90238	61.1	-	JYNS01	73	4303	4119	2/26/15	4/10/17	Scaffold	DOE Joint Genome Institute	SAMN03351828	GCA_000934725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/725/GCA_000934725.1_ASM93472v1	-	73a
Desulfonatronum thioautotrophicum	617001	PRJNA262419	262419	Proteobacteria	delta/epsilon subdivisions	4.6346	57	-	JYNO01	53	4256	4073	2/26/15	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN03351823	GCA_000934745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/745/GCA_000934745.1_ASM93474v1	-	ASO4-1
Thiomicrospira microaerophila	406020	PRJNA263055	263055	Proteobacteria	Gammaproteobacteria	3.10223	45.7	-	JYNN01	101	2829	2641	2/26/15	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN03351773	GCA_000934765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/765/GCA_000934765.1_ASM93476v1	-	ASL8-2
Bacillus subterraneus	285983	PRJNA268539	268539	Terrabacteria group	Firmicutes	3.89999	42.1	-	JXIQ01	208	3795	3668	2/26/15	4/17/17	Contig	MIT	SAMN03220617	GCA_000934845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/845/GCA_000934845.1_ASM93484v1	25858826	MITOT1
Candidatus Nomurabacteria bacterium GW2011_GWF2_30_133	1618771	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.663818	30.7	-	LBNY01	6	672	672	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319239	GCA_000989175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/175/GCA_000989175.1_ASM98917v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWC1_30_29	1618582	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.818793	30.7	-	LBNZ01	3	906	906	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319240	GCA_000989165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/165/GCA_000989165.1_ASM98916v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWE1_37_24	1618709	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.952913	36.6	-	LBTC01	8	928	926	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319376	GCA_000989265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/265/GCA_000989265.1_ASM98926v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWD1_31_12	1618591	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.822284	30.9	-	LBOB01	14	915	915	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319242	GCA_000989245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/245/GCA_000989245.1_ASM98924v1	-	-
candidate division TM6 bacterium GW2011_GWE2_31_21	1619073	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.08274	31.8	-	LBOC01	10	979	977	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319243	GCA_000989255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/255/GCA_000989255.1_ASM98925v1	-	-
Candidatus Shapirobacteria bacterium GW2011_GWF2_37_20	1618492	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.809864	37.7	-	LBTB01	17	915	913	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319375	GCA_000989305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/305/GCA_000989305.1_ASM98930v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWB1_31_29	1618565	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.814831	30.7	-	LBOE01	6	900	900	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319245	GCA_000989325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/325/GCA_000989325.1_ASM98932v1	-	-
Parcubacteria group bacterium GW2011_GWA2_31_28	1618806	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.44475	31	-	LBOD01	40	526	526	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319244	GCA_000989335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/335/GCA_000989335.1_ASM98933v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWE2_31_40	1618763	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.697877	31	-	LBOF01	8	724	722	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319247	GCA_000989355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/355/GCA_000989355.1_ASM98935v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWF1_31_48	1618767	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.763316	32.3	-	LBOG01	19	781	778	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319248	GCA_000989365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/365/GCA_000989365.1_ASM98936v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWE2_31_6	1618599	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.481802	30.9	-	LBOH01	57	637	637	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319249	GCA_000989405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/405/GCA_000989405.1_ASM98940v1	-	-
Parcubacteria group bacterium GW2011_GWC2_32_10	1618918	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.02217	31.7	-	LBOJ01	37	1111	1108	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319251	GCA_000989435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/435/GCA_000989435.1_ASM98943v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWC2_31_9	1618586	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.796937	30.6	-	LBOI01	24	931	921	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319250	GCA_000989425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/425/GCA_000989425.1_ASM98942v1	-	-
Candidatus Roizmanbacteria bacterium GW2011_GWA2_32_13	1618475	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.488392	31.8	-	LBOK01	60	593	593	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319252	GCA_000989445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/445/GCA_000989445.1_ASM98944v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWF2_32_16	1618603	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.818494	30.8	-	LBOL01	5	904	904	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319253	GCA_000989485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/485/GCA_000989485.1_ASM98948v1	-	-
candidate division WS6 bacterium GW2011_GWA2_37_6	1619087	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.666805	36.5	-	LBTH01	69	746	743	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319381	GCA_000989505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/505/GCA_000989505.1_ASM98950v1	-	-
candidate division TM6 bacterium GW2011_GWF2_32_72	1619079	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.987212	32.7	-	LBON01	10	883	881	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319255	GCA_000989525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/525/GCA_000989525.1_ASM98952v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWE1_32_28	1618760	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.667288	30.8	-	LBOM01	6	676	673	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319254	GCA_000989515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/515/GCA_000989515.1_ASM98951v1	-	-
Candidatus Peregrinibacteria bacterium GW2011_GWA2_33_10	1619054	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.25995	32.7	-	LBOO01	30	1145	1143	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319256	GCA_000989565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/565/GCA_000989565.1_ASM98956v1	-	-
Candidatus Peregrinibacteria bacterium GW2011_GWF2_33_10	1619065	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.56463	33.2	-	LBOP01	48	1396	1395	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319257	GCA_000989585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/585/GCA_000989585.1_ASM98958v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWC2_33_12	1618587	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.853681	32.9	-	LBOQ01	23	993	993	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319258	GCA_000989595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/595/GCA_000989595.1_ASM98959v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWA1_37_20	1618729	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.575803	36.9	-	LBTA01	67	633	633	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319374	GCA_000989615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/615/GCA_000989615.1_ASM98961v1	-	-
Candidatus Peregrinibacteria bacterium GW2011_GWC2_33_13	1619061	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.43302	32.6	-	LBOR01	25	1294	1292	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319259	GCA_000989635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/635/GCA_000989635.1_ASM98963v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWA2_33_20	1618560	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.857882	32.9	-	LBOU01	19	994	994	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319262	GCA_000989685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/685/GCA_000989685.1_ASM98968v1	-	-
Parcubacteria group bacterium GW2011_GWA2_33_14	1618807	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.630931	33.1	-	LBOS01	37	673	673	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319260	GCA_000989665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/665/GCA_000989665.1_ASM98966v1	-	-
candidate division WS6 bacterium GW2011_GWC1_33_20	1619089	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.652879	32.7	-	LBOV01	23	666	666	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319263	GCA_000989705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/705/GCA_000989705.1_ASM98970v1	-	-
candidate division WS6 bacterium GW2011_GWE2_33_157	1619095	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.612802	32.9	-	LBOT01	29	629	627	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319261	GCA_000989675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/675/GCA_000989675.1_ASM98967v1	-	-
Candidatus Levybacteria bacterium GW2011_GWA2_37_36	1618457	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.508761	36.9	-	LBTD01	48	552	552	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319377	GCA_000989745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/745/GCA_000989745.1_ASM98974v1	-	-
Candidatus Levybacteria bacterium GW2011_GWC2_37_7	1618467	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.662825	37	-	LBTK01	66	759	757	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319384	GCA_000989785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/785/GCA_000989785.1_ASM98978v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWB1_33_22	1618566	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.860025	32.9	-	LBOW01	19	998	998	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319264	GCA_000989765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/765/GCA_000989765.1_ASM98976v1	-	-
candidate division WS6 bacterium GW2011_GWF1_33_233	1619096	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.617993	32.7	-	LBOX01	23	640	640	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319265	GCA_000989775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/775/GCA_000989775.1_ASM98977v1	-	-
Microgenomates group bacterium GW2011_GWC1_33_28	1618508	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.853245	32.9	-	LBOY01	21	990	990	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319266	GCA_000989825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/825/GCA_000989825.1_ASM98982v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWA1_33_30	1618542	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.864377	32.9	-	LBPA01	19	1050	1049	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319268	GCA_000989845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/845/GCA_000989845.1_ASM98984v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWD1_37_17	1618702	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.88564	36.3	-	LBSZ01	12	877	875	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319373	GCA_000989885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/885/GCA_000989885.1_ASM98988v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWA2_33_28	1618561	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.854205	32.9	-	LBOZ01	16	1044	1044	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319267	GCA_000989855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/855/GCA_000989855.1_ASM98985v1	-	-
Microgenomates group bacterium GW2011_GWC1_33_32	1618509	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.846109	32.9	-	LBPB01	17	1035	1035	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319269	GCA_000989865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/865/GCA_000989865.1_ASM98986v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWA1_33_33	1618543	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.86671	32.9	-	LBPC01	21	1013	1013	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319270	GCA_000989925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/925/GCA_000989925.1_ASM98992v1	-	-
Candidatus Roizmanbacteria bacterium GW2011_GWA2_33_33	1618476	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.380236	33.4	-	LBPD01	34	449	449	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319271	GCA_000989935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/935/GCA_000989935.1_ASM98993v1	-	-
candidate division TM6 bacterium GW2011_GWF2_37_49	1619083	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.487	37	-	LBTE01	23	1227	1225	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319378	GCA_000989955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/955/GCA_000989955.1_ASM98995v1	-	-
candidate division TM6 bacterium GW2011_GWF2_33_332	1619080	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.60278	32.3	-	LBPE01	33	1554	1552	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319272	GCA_000989975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/975/GCA_000989975.1_ASM98997v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWB1_33_38	1618567	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.845411	32.9	-	LBPF01	14	1031	1031	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319273	GCA_000990005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/005/GCA_000990005.1_ASM99000v1	-	-
candidate division WS6 bacterium GW2011_WS6_33_547	1619101	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.6174	32.7	-	LBPG01	34	649	649	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319274	GCA_000990025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/025/GCA_000990025.1_ASM99002v1	-	-
Parcubacteria group bacterium GW2011_GWA1_33_6	1618781	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.254801	33	-	LBPH01	34	292	292	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319275	GCA_000990045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/045/GCA_000990045.1_ASM99004v1	-	-
Candidatus Levybacteria bacterium GW2011_GWA1_37_16	1618452	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.678048	37.1	-	LBSY01	45	755	755	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319372	GCA_000990055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/055/GCA_000990055.1_ASM99005v1	-	-
candidate division WS6 bacterium GW2011_GWB1_33_6	1619088	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.670421	32.9	-	LBPI01	23	664	663	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319276	GCA_000990085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/085/GCA_000990085.1_ASM99008v1	-	-
Microgenomates group bacterium GW2011_GWD1_33_9	1618533	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.70033	32.7	-	LBPJ01	57	877	877	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319277	GCA_000990105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/105/GCA_000990105.1_ASM99010v1	-	-
candidate division WS6 bacterium GW2011_GWF2_33_92	1619099	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.615433	32.9	-	LBPK01	36	641	641	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319278	GCA_000990125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/125/GCA_000990125.1_ASM99012v1	-	-
Parcubacteria group bacterium GW2011_GWB1_37_13	1618863	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.443034	36.5	-	LBSW01	46	506	506	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319370	GCA_000990145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/145/GCA_000990145.1_ASM99014v1	-	-
Parcubacteria group bacterium GW2011_GWC1_34_10	1618891	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.505998	34.7	-	LBPL01	22	538	537	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319279	GCA_000990165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/165/GCA_000990165.1_ASM99016v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWF1_34_10	1618715	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.27296	34	-	LBPM01	29	1234	1233	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319280	GCA_000990175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/175/GCA_000990175.1_ASM99017v1	-	-
Candidatus Gottesmanbacteria bacterium GW2011_GWA1_34_13	1618434	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.56282	32.7	-	LBPN01	32	598	597	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319281	GCA_000990205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/205/GCA_000990205.1_ASM99020v1	-	-
Candidatus Magasanikbacteria bacterium GW2011_GWC2_34_16	1619045	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.388643	36.7	-	LBPO01	9	365	363	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319282	GCA_000990225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/225/GCA_000990225.1_ASM99022v1	-	-
Candidatus Roizmanbacteria bacterium GW2011_GWA2_34_18	1618477	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.416589	34	-	LBPP01	32	482	482	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319283	GCA_000990245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/245/GCA_000990245.1_ASM99024v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWB1_37_5	1618742	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.7282	36.7	-	LBTF01	71	832	831	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319379	GCA_000990255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/255/GCA_000990255.1_ASM99025v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWF1_34_20	1618768	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.768413	34.4	-	LBPQ01	21	799	794	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319284	GCA_000990275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/275/GCA_000990275.1_ASM99027v1	-	-
Candidatus Roizmanbacteria bacterium GW2011_GWC2_34_23	1618484	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.707712	33.7	-	LBPR01	29	783	783	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319285	GCA_000990305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/305/GCA_000990305.1_ASM99030v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWA1_34_41	1618544	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.818391	30.7	-	LBPT01	3	910	905	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319288	GCA_000990335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/335/GCA_000990335.1_ASM99033v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWE2_34_25	1618764	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.767161	34.4	-	LBPS01	19	795	795	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319286	GCA_000990325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/325/GCA_000990325.1_ASM99032v1	-	-
Candidatus Magasanikbacteria bacterium GW2011_GWC2_37_14	1619046	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.1024	36.2	-	LBSX01	24	1016	1012	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319371	GCA_000990355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/355/GCA_000990355.1_ASM99035v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWF2_34_56	1618720	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.819241	33.7	-	LBPU01	50	843	842	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319289	GCA_000990385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/385/GCA_000990385.1_ASM99038v1	-	-
candidate division WS6 bacterium GW2011_GWE1_34_7	1619093	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.549993	33.1	-	LBPV01	68	606	606	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319290	GCA_000990405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/405/GCA_000990405.1_ASM99040v1	-	-
Candidatus Roizmanbacteria bacterium GW2011_GWA2_37_7	1618481	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.962621	37.3	-	LBTJ01	79	1070	1070	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319383	GCA_000990445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/445/GCA_000990445.1_ASM99044v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWF2_35_12	1618772	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.528856	34.7	-	LBPW01	29	581	581	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319291	GCA_000990415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/415/GCA_000990415.1_ASM99041v1	-	-
Candidatus Roizmanbacteria bacterium GW2011_GWC2_35_12	1618485	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.01922	34.7	-	LBPX01	59	1086	1085	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319292	GCA_000990465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/465/GCA_000990465.1_ASM99046v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWE1_35_16	1618761	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.786426	34.4	-	LBPY01	27	826	826	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319293	GCA_000990495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/495/GCA_000990495.1_ASM99049v1	-	-
Microgenomates group bacterium GW2011_GWC1_37_12b	1618510	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.97022	37.2	-	LBSU01	24	1051	1051	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319368	GCA_000990505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/505/GCA_000990505.1_ASM99050v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWE1_35_17	1618707	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.376	35	-	LBQA01	24	1299	1299	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319295	GCA_000990515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/515/GCA_000990515.1_ASM99051v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWE2_35_164	1618711	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.860762	34.9	-	LBPZ01	87	926	925	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319294	GCA_000990485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/485/GCA_000990485.1_ASM99048v1	-	-
candidate division CPR3 bacterium GW2011_GWF2_35_18	1618350	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.13628	35	-	LBQB01	10	1064	1062	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319296	GCA_000990575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/575/GCA_000990575.1_ASM99057v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWC2_37_73	1618697	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.970462	36.6	-	LBTM01	28	984	984	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319386	GCA_000990595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/595/GCA_000990595.1_ASM99059v1	-	-
Candidatus Roizmanbacteria bacterium GW2011_GWA2_35_19	1618478	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.11895	34.9	-	LBQC01	52	1198	1198	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319297	GCA_000990565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/565/GCA_000990565.1_ASM99056v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWE2_35_2-	1618712	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.92307	36.4	-	LBQD01	6	905	903	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319298	GCA_000990585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/585/GCA_000990585.1_ASM99058v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWB1_35_20	1618740	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.542255	34.8	-	LBQE01	23	610	610	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319299	GCA_000990645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/645/GCA_000990645.1_ASM99064v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWE1_35_20	1618596	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.818212	30.7	-	LBQF01	4	922	909	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319300	GCA_000990655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/655/GCA_000990655.1_ASM99065v1	-	-
candidate division WS6 bacterium GW2011_GWF1_35_23	1619097	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.3348	35.3	-	LBQH01	39	380	380	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319302	GCA_000990695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/695/GCA_000990695.1_ASM99069v1	-	-
Parcubacteria group bacterium GW2011_GWC1_35_21	1618892	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.600176	34.8	-	LBQG01	11	629	629	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319301	GCA_000990665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/665/GCA_000990665.1_ASM99066v1	-	-
Candidatus Roizmanbacteria bacterium GW2011_GWC2_37_13	1618486	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.988286	36.8	-	LBSV01	21	1011	1010	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319369	GCA_000990725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/725/GCA_000990725.1_ASM99072v1	-	-
Candidatus Campbellbacteria bacterium GW2011_GWC1_35_31	1618629	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.743731	34.7	-	LBQK01	4	769	765	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319305	GCA_000990745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/745/GCA_000990745.1_ASM99074v1	-	-
Candidatus Campbellbacteria bacterium GW2011_GWC2_35_28	1618630	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.638308	34.6	-	LBQJ01	2	661	660	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319304	GCA_000990755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/755/GCA_000990755.1_ASM99075v1	-	-
Candidatus Campbellbacteria bacterium GW2011_GWD2_35_24	1618632	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.738197	34.6	-	LBQI01	4	767	763	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319303	GCA_000990765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/765/GCA_000990765.1_ASM99076v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWC2_35_35	1618751	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.576788	34.8	-	LBQL01	25	626	626	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319306	GCA_000990815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/815/GCA_000990815.1_ASM99081v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWF2_35_39	1618721	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.978783	35	-	LBQM01	35	1021	1019	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319307	GCA_000990805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/805/GCA_000990805.1_ASM99080v1	-	-
Microgenomates group bacterium GW2011_GWA2_37_6	1618497	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.431344	37.2	-	LBTG01	54	516	516	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319380	GCA_000990825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/825/GCA_000990825.1_ASM99082v1	-	-
Candidatus Campbellbacteria bacterium GW2011_GWD1_35_49	1618631	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.743531	34.7	-	LBQN01	4	769	765	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319308	GCA_000990865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/865/GCA_000990865.1_ASM99086v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWF1_35_5	1618716	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.1674	35	-	LBQQ01	93	1163	1163	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319311	GCA_000990885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/885/GCA_000990885.1_ASM99088v1	-	-
Parcubacteria group bacterium GW2011_GWB1_35_5	1618861	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.463942	35	-	LBQO01	52	519	519	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319309	GCA_000990895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/895/GCA_000990895.1_ASM99089v1	-	-
Candidatus Levybacteria bacterium GW2011_GWB1_35_5	1618461	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.481657	34.7	-	LBQP01	44	589	589	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319310	GCA_000990905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/905/GCA_000990905.1_ASM99090v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWF2_35_54	1618722	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.22249	35.2	-	LBQR01	76	1255	1254	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319312	GCA_000990945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/945/GCA_000990945.1_ASM99094v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWF2_35_66	1618773	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.651317	34.8	-	LBQT01	14	678	678	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319314	GCA_000990965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/965/GCA_000990965.1_ASM99096v1	-	-
Parcubacteria group bacterium GW2011_GWD2_35_7	1618940	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.354123	34.7	-	LBQU01	38	398	398	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319315	GCA_000990975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/975/GCA_000990975.1_ASM99097v1	-	-
candidate division WS6 bacterium GW2011_GWD1_35_594	1619092	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.629503	33.2	-	LBQS01	24	652	652	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319313	GCA_000990985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/990/985/GCA_000990985.1_ASM99098v1	-	-
candidate division CPR3 bacterium GW2011_GWE2_35_7	1618349	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.7543	34.3	-	LBQV01	66	781	780	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319316	GCA_000991025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/025/GCA_000991025.1_ASM99102v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWA1_35_8	1618727	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.26348	34.9	-	LBQW01	18	287	287	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319317	GCA_000991045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/045/GCA_000991045.1_ASM99104v1	-	-
Parcubacteria group bacterium GW2011_GWC1_35_8	1618893	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.395068	35.2	-	LBQY01	39	447	447	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319319	GCA_000991075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/075/GCA_000991075.1_ASM99107v1	-	-
Candidatus Roizmanbacteria bacterium GW2011_GWA2_35_8	1618479	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.567335	34.6	-	LBQX01	51	633	633	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319318	GCA_000991055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/055/GCA_000991055.1_ASM99105v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWC2_35_8	1618752	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.529836	35.2	-	LBQZ01	51	606	605	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319320	GCA_000991105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/105/GCA_000991105.1_ASM99110v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWA2_35_80	1618733	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.45172	34.6	-	LBRA01	36	536	536	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319321	GCA_000991125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/125/GCA_000991125.1_ASM99112v1	-	-
Candidatus Roizmanbacteria bacterium GW2011_GWC1_37_12	1618483	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.994505	36.9	-	LBST01	18	1006	1004	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319367	GCA_000991135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/135/GCA_000991135.1_ASM99113v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWF2_37_7	1618725	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.404213	37.3	-	LBTL01	48	435	435	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319385	GCA_000991155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/155/GCA_000991155.1_ASM99115v1	-	-
Berkelbacteria bacterium GW2011_GWA2_35_9	1618333	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.619203	34	-	LBRB01	37	681	680	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319322	GCA_000991185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/185/GCA_000991185.1_ASM99118v1	-	-
Parcubacteria group bacterium GW2011_GWA2_36_10	1618808	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.79887	36.2	-	LBRC01	48	864	863	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319323	GCA_000991205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/205/GCA_000991205.1_ASM99120v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWA1_37_7	1618545	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.744058	37.7	-	LBTI01	73	853	852	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319382	GCA_000991215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/215/GCA_000991215.1_ASM99121v1	-	-
Parcubacteria group bacterium GW2011_GWC1_36_108	1618894	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.04717	36.5	-	LBRD01	10	1010	1009	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319324	GCA_000991245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/245/GCA_000991245.1_ASM99124v1	-	-
candidate division WS6 bacterium GW2011_GWC1_36_11	1619090	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.711267	35.7	-	LBRE01	47	737	737	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319325	GCA_000991265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/265/GCA_000991265.1_ASM99126v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWE2_36_115	1618765	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.670169	36.4	-	LBRF01	10	689	688	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319326	GCA_000991285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/285/GCA_000991285.1_ASM99128v1	-	-
Parcubacteria group bacterium GW2011_GWA1_36_12	1618782	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.830276	36.9	-	LBRG01	40	905	904	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319327	GCA_000991295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/295/GCA_000991295.1_ASM99129v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWD2_36_12	1618703	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.02844	36.2	-	LBRH01	72	999	999	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319328	GCA_000991325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/325/GCA_000991325.1_ASM99132v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWF2_36_126	1618774	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.788514	36.1	-	LBRI01	12	817	817	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319329	GCA_000991335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/335/GCA_000991335.1_ASM99133v1	-	-
Candidatus Levybacteria bacterium GW2011_GWA2_36_13	1618456	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.417526	36.3	-	LBRJ01	25	452	452	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319331	GCA_000991365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/365/GCA_000991365.1_ASM99136v1	-	-
candidate division TM6 bacterium GW2011_GWF2_36_131	1619081	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.06629	36	-	LBRK01	17	1070	1068	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319332	GCA_000991385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/385/GCA_000991385.1_ASM99138v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWD2_36_14	1618758	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.803389	36.2	-	LBRL01	4	817	814	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319333	GCA_000991405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/405/GCA_000991405.1_ASM99140v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWA1_36_15	1618728	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.617508	35	-	LBRM01	22	648	648	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319334	GCA_000991415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/415/GCA_000991415.1_ASM99141v1	-	-
Parcubacteria group bacterium GW2011_GWC2_36_17	1618919	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.679157	37.3	-	LBRN01	25	677	676	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319335	GCA_000991445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/445/GCA_000991445.1_ASM99144v1	-	-
Candidatus Levybacteria bacterium GW2011_GWB1_36_18	1618462	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.354999	36.3	-	LBRO01	28	403	403	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319336	GCA_000991465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/465/GCA_000991465.1_ASM99146v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWD1_36_198	1618701	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.782621	36.4	-	LBRQ01	30	798	798	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319338	GCA_000991495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/495/GCA_000991495.1_ASM99149v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWF2_36_19	1618775	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.792414	36.2	-	LBRP01	6	804	800	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319337	GCA_000991485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/485/GCA_000991485.1_ASM99148v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWD2_36_198	1618704	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.753525	36.4	-	LBRR01	45	770	769	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319339	GCA_000991525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/525/GCA_000991525.1_ASM99152v1	-	-
Candidatus Roizmanbacteria bacterium GW2011_GWA2_36_23	1618480	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.548054	36	-	LBRS01	9	553	552	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319340	GCA_000991535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/535/GCA_000991535.1_ASM99153v1	-	-
Parcubacteria group bacterium GW2011_GWA2_36_24	1618809	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.436316	36.4	-	LBRT01	47	523	523	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319341	GCA_000991565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/565/GCA_000991565.1_ASM99156v1	-	-
candidate division TM6 bacterium GW2011_GWE2_36_25	1619074	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.0702	36	-	LBRU01	17	1071	1069	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319342	GCA_000991575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/575/GCA_000991575.1_ASM99157v1	-	-
candidate division WS6 bacterium GW2011_WS6_36_26	1619102	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.452645	35.6	-	LBRV01	47	510	510	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319343	GCA_000991605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/605/GCA_000991605.1_ASM99160v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWF1_36_4	1618717	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.703495	35.9	-	LBRW01	73	775	774	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319344	GCA_000991615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/615/GCA_000991615.1_ASM99161v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWF1_36_47	1618769	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.786678	36.1	-	LBRY01	13	815	815	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319346	GCA_000991655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/655/GCA_000991655.1_ASM99165v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWE2_36_40	1618713	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.00584	36.1	-	LBRX01	63	969	969	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319345	GCA_000991645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/645/GCA_000991645.1_ASM99164v1	-	-
Parcubacteria group bacterium GW2011_GWB1_36_5	1618862	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.546237	36	-	LBRZ01	46	649	649	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319347	GCA_000991685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/685/GCA_000991685.1_ASM99168v1	-	-
Candidatus Daviesbacteria bacterium GW2011_GWB1_36_5	1618426	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.08032	35.9	-	LBSA01	55	1234	1231	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319348	GCA_000991695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/695/GCA_000991695.1_ASM99169v1	-	-
Candidatus Pacebacteria bacterium GW2011_GWF1_36_5	1618471	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.851196	36.1	-	LBSB01	43	953	951	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319349	GCA_000991725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/725/GCA_000991725.1_ASM99172v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWB1_36_6	1618741	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.799418	36.2	-	LBSC01	19	824	821	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319350	GCA_000991735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/735/GCA_000991735.1_ASM99173v1	-	-
candidate division TM6 bacterium GW2011_GWF2_36_6	1619082	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.6226	36.1	-	LBSD01	67	580	580	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319351	GCA_000991765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/765/GCA_000991765.1_ASM99176v1	-	-
candidate division WS6 bacterium GW2011_GWE1_36_69	1619094	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.221551	36	-	LBSE01	31	256	256	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319352	GCA_000991775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/775/GCA_000991775.1_ASM99177v1	-	-
candidate division WS6 bacterium GW2011_GWC2_36_7	1619091	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.568435	35.8	-	LBSF01	57	614	612	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319353	GCA_000991805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/805/GCA_000991805.1_ASM99180v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWE1_36_7	1618708	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.819859	36	-	LBSG01	87	806	806	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319354	GCA_000991815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/815/GCA_000991815.1_ASM99181v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWE1_36_71	1618762	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.808426	36.1	-	LBSH01	13	833	833	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319355	GCA_000991845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/845/GCA_000991845.1_ASM99184v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWF1_36_78	1618718	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.08246	35.9	-	LBSI01	25	1089	1087	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319356	GCA_000991855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/855/GCA_000991855.1_ASM99185v1	-	-
candidate division WS6 bacterium GW2011_GWF1_36_8	1619098	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.534556	35.8	-	LBSK01	59	575	575	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319358	GCA_000991885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/885/GCA_000991885.1_ASM99188v1	-	-
Candidatus Daviesbacteria bacterium GW2011_GWA1_36_8	1618417	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.10389	36.1	-	LBSJ01	48	1208	1208	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319357	GCA_000991895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/895/GCA_000991895.1_ASM99189v1	-	-
Berkelbacteria bacterium GW2011_GWA1_36_9	1618331	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.861834	35.9	-	LBSM01	30	920	920	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319360	GCA_000991925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/925/GCA_000991925.1_ASM99192v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWF2_36_839	1618723	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.11482	36	-	LBSL01	29	1126	1126	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319359	GCA_000991935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/935/GCA_000991935.1_ASM99193v1	-	-
candidate division TM6 bacterium GW2011_GWA2_36_9	1619072	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.10971	36	-	LBSN01	34	1136	1134	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319361	GCA_000991965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/965/GCA_000991965.1_ASM99196v1	-	-
Parcubacteria group bacterium GW2011_GWC1_36_9	1618895	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.567236	36.3	-	LBSO01	51	645	645	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319362	GCA_000991975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/991/975/GCA_000991975.1_ASM99197v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWC2_36_9	1618753	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.779691	36.6	-	LBSP01	31	834	831	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319363	GCA_000992005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/005/GCA_000992005.1_ASM99200v1	-	-
Parcubacteria group bacterium GW2011_GWA2_37_10	1618810	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.716262	36.6	-	LBSQ01	40	833	832	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319364	GCA_000992015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/015/GCA_000992015.1_ASM99201v1	-	-
Candidatus Wolfebacteria bacterium GW2011_GWC1_37_10	1619010	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.566862	37.4	-	LBSR01	23	599	597	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319365	GCA_000992045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/045/GCA_000992045.1_ASM99204v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWF2_37_11	1618724	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.91142	36.4	-	LBSS01	10	902	901	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319366	GCA_000992055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/055/GCA_000992055.1_ASM99205v1	-	-
Candidatus Magasanikbacteria bacterium GW2011_GWA2_37_8	1619036	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.864631	36.6	-	LBTN01	44	849	847	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319387	GCA_000992085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/085/GCA_000992085.1_ASM99208v1	-	-
Candidatus Levybacteria bacterium GW2011_GWB1_37_8	1618463	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.711694	36.7	-	LBTO01	52	796	796	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319388	GCA_000992095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/095/GCA_000992095.1_ASM99209v1	-	-
Microgenomates group bacterium GW2011_GWC1_37_8	1618511	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.03702	36.9	-	LBTP01	56	1178	1177	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319389	GCA_000992125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/125/GCA_000992125.1_ASM99212v1	-	-
Parcubacteria group bacterium GW2011_GWE2_37_8	1618948	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.629842	37.4	-	LBTQ01	48	663	662	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319390	GCA_000992135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/135/GCA_000992135.1_ASM99213v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWC2_37_8	1618698	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.825775	37.3	-	LBTS01	48	829	828	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319392	GCA_000992165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/165/GCA_000992165.1_ASM99216v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWA1_37_8	1618546	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.889915	37.3	-	LBTR01	54	970	969	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319391	GCA_000992155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/155/GCA_000992155.1_ASM99215v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWC1_37_9	1618750	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.794606	36.2	-	LBTT01	20	841	838	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319393	GCA_000992205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/205/GCA_000992205.1_ASM99220v1	-	-
Candidatus Yanofskybacteria bacterium GW2011_GWC2_37_9	1619028	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.551883	36.9	-	LBTU01	53	626	626	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319394	GCA_000992225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/225/GCA_000992225.1_ASM99222v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWD2_37_9	1618705	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.936624	36.3	-	LBTV01	41	958	956	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319395	GCA_000992235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/235/GCA_000992235.1_ASM99223v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWD1_38_10	1618592	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.843974	37.9	-	LBTW01	78	914	914	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319396	GCA_000992255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/255/GCA_000992255.1_ASM99225v1	-	-
Candidatus Shapirobacteria bacterium GW2011_GWE1_38_10	1618488	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.962636	37.9	-	LBTX01	41	1058	1056	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319397	GCA_000992285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/285/GCA_000992285.1_ASM99228v1	-	-
candidate division TM6 bacterium GW2011_GWF2_38_10	1619084	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.05176	38.3	-	LBTY01	29	911	911	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319398	GCA_000992305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/305/GCA_000992305.1_ASM99230v1	-	-
Parcubacteria group bacterium GW2011_GWD2_38_11	1618941	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.935829	37.3	-	LBTZ01	39	903	903	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319399	GCA_000992325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/325/GCA_000992325.1_ASM99232v1	-	-
Parcubacteria group bacterium GW2011_GWD2_38_12	1618942	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.674362	37.4	-	LBUA01	23	661	660	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319400	GCA_000992345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/345/GCA_000992345.1_ASM99234v1	-	-
Microgenomates group bacterium GW2011_GWC1_38_12	1618512	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.09963	38.4	-	LBUB01	26	1187	1187	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319401	GCA_000992365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/365/GCA_000992365.1_ASM99236v1	-	-
Candidatus Falkowbacteria bacterium GW2011_GWF2_38_1205	1618641	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.37985	38.4	-	LBUC01	18	1196	1194	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319402	GCA_000992375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/375/GCA_000992375.1_ASM99237v1	-	-
Parcubacteria group bacterium GW2011_GWA2_38_13	1618811	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.03678	38.2	-	LBUD01	63	1021	1020	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319403	GCA_000992395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/395/GCA_000992395.1_ASM99239v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWC1_38_13	1618583	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.980472	37.9	-	LBUE01	50	1020	1019	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319404	GCA_000992425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/425/GCA_000992425.1_ASM99242v1	-	-
Parcubacteria group bacterium GW2011_GWA2_38_13b	1618780	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.874952	37.8	-	LBUF02	21	922	839	5/7/15	6/16/17	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319405	GCA_000992445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/445/GCA_000992445.2_ASM99244v2	28067254	-
Microgenomates group bacterium GW2011_GWC1_38_14	1618513	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.335942	37.5	-	LBUG01	24	392	392	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319406	GCA_000992455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/455/GCA_000992455.1_ASM99245v1	-	-
Parcubacteria group bacterium GW2011_GWD1_38_16	1618936	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.651339	37.4	-	LBUH01	30	633	630	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319407	GCA_000992485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/485/GCA_000992485.1_ASM99248v1	-	-
Parcubacteria group bacterium GW2011_GWC1_38_17	1618896	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.710589	37.3	-	LBUI01	17	704	699	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319408	GCA_000992505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/505/GCA_000992505.1_ASM99250v1	-	-
Parcubacteria group bacterium GW2011_GWE2_38_18	1618949	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.604521	38	-	LBUK01	44	615	615	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319410	GCA_000992525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/525/GCA_000992525.1_ASM99252v1	-	-
Candidatus Daviesbacteria bacterium GW2011_GWA2_38_17	1618421	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.458228	38.4	-	LBUJ01	19	526	526	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319409	GCA_000992535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/535/GCA_000992535.1_ASM99253v1	-	-
Parcubacteria group bacterium GW2011_GWC1_38_22	1618897	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.938859	37.4	-	LBUL01	50	933	933	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319411	GCA_000992565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/565/GCA_000992565.1_ASM99256v1	-	-
Candidatus Falkowbacteria bacterium GW2011_GWC2_38_22	1618636	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.38785	38.3	-	LBUM01	22	1203	1201	5/7/15	6/25/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319412	GCA_000992575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/575/GCA_000992575.2_ASM99257v2	-	-
Candidatus Shapirobacteria bacterium GW2011_GWF1_38_23	1618491	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.781735	37.8	-	LBUO01	28	906	904	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319414	GCA_000992605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/605/GCA_000992605.1_ASM99260v1	-	-
Candidatus Falkowbacteria bacterium GW2011_GWF1_38_22	1618640	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.38711	38.3	-	LBUN01	18	1202	1200	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319413	GCA_000992615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/615/GCA_000992615.1_ASM99261v1	-	-
Candidatus Daviesbacteria bacterium GW2011_GWA2_38_24	1618422	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.16506	37.5	-	LBUP01	26	1237	1234	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319415	GCA_000992645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/645/GCA_000992645.1_ASM99264v1	-	-
Candidatus Falkowbacteria bacterium GW2011_GWE2_38_254	1618639	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.38203	38.4	-	LBUQ01	17	1194	1192	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319416	GCA_000992665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/665/GCA_000992665.1_ASM99266v1	-	-
Parcubacteria group bacterium GW2011_GWA2_38_27	1618812	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.674527	38.3	-	LBUR01	26	652	652	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319417	GCA_000992685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/685/GCA_000992685.1_ASM99268v1	-	-
Candidatus Peregrinibacteria bacterium GW2011_GWF2_38_29	1619066	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.2339	38	-	LBUS01	23	1163	1162	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319418	GCA_000992695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/695/GCA_000992695.1_ASM99269v1	-	-
Candidatus Shapirobacteria bacterium GW2011_GWE2_38_30	1618490	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.79905	38.1	-	LBUT01	33	904	902	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319419	GCA_000992725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/725/GCA_000992725.1_ASM99272v1	-	-
Candidatus Falkowbacteria bacterium GW2011_GWE1_38_31	1618638	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.35036	38.4	-	LBUU01	16	1167	1165	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319420	GCA_000992745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/745/GCA_000992745.1_ASM99274v1	-	-
Candidatus Peregrinibacteria bacterium GW2011_GWA2_38_36	1619055	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.993453	38.6	-	LBUV01	15	921	921	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319421	GCA_000992775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/775/GCA_000992775.1_ASM99277v1	-	-
Candidatus Falkowbacteria bacterium GW2011_GWD2_38_42	1618637	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.38836	38.3	-	LBUW01	17	1205	1203	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319422	GCA_000992765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/765/GCA_000992765.1_ASM99276v1	-	-
Berkelbacteria bacterium GW2011_GWB1_38_5	1618336	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.547145	38.2	-	LBUX01	48	613	613	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319423	GCA_000992805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/805/GCA_000992805.1_ASM99280v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWB1_38_5	1618568	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.713546	38	-	LBUY01	64	780	778	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319424	GCA_000992825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/825/GCA_000992825.1_ASM99282v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWB1_38_5b	1618569	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.858488	38.1	-	LBUZ01	58	971	970	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319425	GCA_000992855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/855/GCA_000992855.1_ASM99285v1	-	-
Microgenomates group bacterium GW2011_GWF1_38_5	1618536	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.443802	37.8	-	LBVA01	56	516	516	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319426	GCA_000992845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/845/GCA_000992845.1_ASM99284v1	-	-
Candidatus Daviesbacteria bacterium GW2011_GWF2_38_6	1618432	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.769554	38	-	LBVC01	88	953	952	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319428	GCA_000992885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/885/GCA_000992885.1_ASM99288v1	-	-
Parcubacteria group bacterium GW2011_GWA1_38_7	1618783	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.780124	38.1	-	LBVD01	34	844	843	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319429	GCA_000992905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/905/GCA_000992905.1_ASM99290v1	-	-
Parcubacteria group bacterium GW2011_GWC1_38_6	1618898	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.513899	37.6	-	LBVB01	61	600	599	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319427	GCA_000992935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/935/GCA_000992935.1_ASM99293v1	-	-
Candidatus Daviesbacteria bacterium GW2011_GWA1_38_7	1618418	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.962353	37.5	-	LBVE01	83	1136	1133	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319430	GCA_000992925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/925/GCA_000992925.1_ASM99292v1	-	-
Parcubacteria group bacterium GW2011_GWC2_38_7	1618920	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.805324	38.3	-	LBVF01	71	863	863	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319431	GCA_000992955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/955/GCA_000992955.1_ASM99295v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWD2_38_7	1618706	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.631075	37.6	-	LBVG01	65	696	696	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319432	GCA_000992985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/992/985/GCA_000992985.1_ASM99298v1	-	-
Candidatus Daviesbacteria bacterium GW2011_GWF2_38_7	1618433	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.886482	38.7	-	LBVH01	84	1004	1002	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319433	GCA_000993005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/005/GCA_000993005.1_ASM99300v1	-	-
Parcubacteria group bacterium GW2011_GWB1_38_8	1618864	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.414197	38.4	-	LBVK01	25	456	456	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319436	GCA_000993055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/055/GCA_000993055.1_ASM99305v1	-	-
Parcubacteria group bacterium GW2011_GWF2_38_76	1618960	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.921119	37	-	LBVI01	24	922	919	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319434	GCA_000993015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/015/GCA_000993015.1_ASM99301v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWA1_38_8	1618547	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.03891	38	-	LBVJ01	59	1094	1092	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319435	GCA_000993025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/025/GCA_000993025.1_ASM99302v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWB1_38_8	1618570	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.29619	37.4	-	LBVL01	31	1394	1394	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319437	GCA_000993085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/085/GCA_000993085.1_ASM99308v1	-	-
Parcubacteria group bacterium GW2011_GWF2_38_8	1618961	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.671846	38	-	LBVM01	52	736	733	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319438	GCA_000993105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/105/GCA_000993105.1_ASM99310v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWB1_38_8b	1618571	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.903868	37.6	-	LBVN01	33	979	978	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319439	GCA_000993115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/115/GCA_000993115.1_ASM99311v1	-	-
Berkelbacteria bacterium GW2011_GWA2_38_9	1618334	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.723914	37.8	-	LBVO01	72	843	842	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319440	GCA_000993135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/135/GCA_000993135.1_ASM99313v1	-	-
Candidatus Curtissbacteria bacterium GW2011_GWC2_38_9	1618414	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.567388	37.5	-	LBVP01	32	606	606	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319441	GCA_000993165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/165/GCA_000993165.1_ASM99316v1	-	-
Candidatus Pacebacteria bacterium GW2011_GWF2_38_9	1618472	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.858341	36	-	LBVQ01	2	873	871	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319442	GCA_000993185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/185/GCA_000993185.1_ASM99318v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWB1_39_10	1618572	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.08307	39.3	-	LBVU01	17	1175	1172	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319446	GCA_000993205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/205/GCA_000993205.1_ASM99320v1	-	-
Candidatus Shapirobacteria bacterium GW2011_GWE1_38_92	1618489	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.684587	38.2	-	LBVR01	62	859	858	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319443	GCA_000993215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/215/GCA_000993215.1_ASM99321v1	-	-
Berkelbacteria bacterium GW2011_GWA1_39_10	1618332	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.343511	38.8	-	LBVS01	17	378	375	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319444	GCA_000993245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/245/GCA_000993245.1_ASM99324v1	-	-
Candidatus Azambacteria bacterium GW2011_GWA2_39_10	1618611	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.282149	38.5	-	LBVT01	31	338	338	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319445	GCA_000993265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/265/GCA_000993265.1_ASM99326v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWB1_39_10b	1618573	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.86359	39.2	-	LBVW01	23	939	934	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319448	GCA_000993305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/305/GCA_000993305.1_ASM99330v1	-	-
candidate division CPR2 bacterium GW2011_GWC2_39_10	1618345	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.09893	38.3	-	LBVV01	34	1125	1124	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319447	GCA_000993275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/275/GCA_000993275.1_ASM99327v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWA1_39_11b	1618548	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.53515	40.1	-	LBVY01	13	582	582	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319450	GCA_000993325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/325/GCA_000993325.1_ASM99332v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWA1_39_12	1618549	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.35809	38.7	-	LBWA01	41	1431	1429	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319452	GCA_000993365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/365/GCA_000993365.1_ASM99336v1	-	-
Candidatus Levybacteria bacterium GW2011_GWA1_39_11	1618453	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.849023	38.5	-	LBVX01	58	899	899	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319449	GCA_000993335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/335/GCA_000993335.1_ASM99333v1	-	-
Parcubacteria group bacterium GW2011_GWC2_39_11	1618921	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.67029	38.5	-	LBVZ01	48	682	682	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319451	GCA_000993375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/375/GCA_000993375.1_ASM99337v1	-	-
Parcubacteria group bacterium GW2011_GWC1_39_12	1618899	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.735048	39.8	-	LBWC01	9	747	746	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319454	GCA_000993415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/415/GCA_000993415.1_ASM99341v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWB1_39_12	1618574	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.51428	38.9	-	LBWB01	56	1819	1817	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319453	GCA_000993405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/405/GCA_000993405.1_ASM99340v1	-	-
Microgenomates group bacterium GW2011_GWC1_39_12	1618514	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.750642	39	-	LBWD01	62	833	833	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319455	GCA_000993445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/445/GCA_000993445.1_ASM99344v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWD2_39_12	1618759	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.754202	39.2	-	LBWE01	25	791	789	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319456	GCA_000993455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/455/GCA_000993455.1_ASM99345v1	-	-
Parcubacteria group bacterium GW2011_GWC2_39_14	1618922	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.22292	39.2	-	LBWI01	50	1211	1210	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319461	GCA_000993485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/485/GCA_000993485.1_ASM99348v1	-	-
Candidatus Yanofskybacteria bacterium GW2011_GWA1_39_13	1619019	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.325844	39.5	-	LBWF01	5	339	338	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319458	GCA_000993495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/495/GCA_000993495.1_ASM99349v1	-	-
Parcubacteria group bacterium GW2011_GWF2_39_13b	1618962	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.418337	39	-	LBWH01	41	440	440	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319460	GCA_000993525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/525/GCA_000993525.1_ASM99352v1	-	-
Candidatus Uhrbacteria bacterium GW2011_GWF2_39_13	1618995	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.16494	40.7	-	LBWG01	53	1082	1082	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319459	GCA_000993535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/535/GCA_000993535.1_ASM99353v1	-	-
candidate division WS6 bacterium GW2011_GWF2_39_15	1619100	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.899311	38.7	-	LBWK01	2	884	883	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319463	GCA_000993565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/565/GCA_000993565.1_ASM99356v1	-	-
Candidatus Yanofskybacteria bacterium GW2011_GWD1_39_16	1619030	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.293396	38.7	-	LBWL01	34	352	352	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319464	GCA_000993585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/585/GCA_000993585.1_ASM99358v1	-	-
Candidatus Peregrinibacteria bacterium GW2011_GWC2_39_14	1619062	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.32426	38.5	-	LBWJ01	21	1249	1247	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319462	GCA_000993595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/595/GCA_000993595.1_ASM99359v1	-	-
Candidatus Peregrinibacteria bacterium GW2011_GWF2_39_17	1619067	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.30867	38.8	-	LBWM01	15	1129	1127	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319465	GCA_000993615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/615/GCA_000993615.1_ASM99361v1	-	-
Parcubacteria group bacterium GW2011_GWA2_39_18	1618813	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.53386	39.2	-	LBWN01	27	562	561	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319466	GCA_000993645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/645/GCA_000993645.1_ASM99364v1	-	-
Microgenomates group bacterium GW2011_GWA2_39_19	1618498	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.717124	39.2	-	LBWO01	31	736	736	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319467	GCA_000993655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/655/GCA_000993655.1_ASM99365v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWA1_39_21	1618550	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.04386	39	-	LBWP01	30	1070	1069	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319468	GCA_000993685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/685/GCA_000993685.1_ASM99368v1	-	-
Candidatus Wolfebacteria bacterium GW2011_GWC2_39_22	1619013	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.987732	43.1	-	LBWR01	9	1010	1009	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319470	GCA_000993695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/695/GCA_000993695.1_ASM99369v1	-	-
Parcubacteria group bacterium GW2011_GWD2_40_9	1618943	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.752222	39.9	-	LCAA01	46	806	804	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319557	GCA_000993845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/845/GCA_000993845.1_ASM99384v1	-	-
Candidatus Curtissbacteria bacterium GW2011_GWA1_40_9	1618408	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.277706	39.3	-	LBZV01	7	340	340	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319552	GCA_000993855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/855/GCA_000993855.1_ASM99385v1	-	-
Parcubacteria group bacterium GW2011_GWA2_40_8	1618818	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.561498	40.1	-	LBZU01	50	605	605	5/7/15	6/25/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319551	GCA_000993865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/865/GCA_000993865.2_ASM99386v2	-	-
Parcubacteria group bacterium GW2011_GWC2_40_31	1618924	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.803977	40.4	-	LBYV01	30	825	824	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319526	GCA_000993875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/875/GCA_000993875.1_ASM99387v1	-	-
Candidatus Gottesmanbacteria bacterium GW2011_GWC2_42_8	1618451	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.952539	41.9	-	LCEO01	78	1109	1109	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319675	GCA_000993925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/925/GCA_000993925.1_ASM99392v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWA2_40_7b	1618563	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.598834	40.3	-	LBZK01	46	694	692	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319541	GCA_000993945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/945/GCA_000993945.1_ASM99394v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWA2_40_9	1618734	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.602347	36.1	-	LBZW01	43	670	669	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319553	GCA_000993955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/955/GCA_000993955.1_ASM99395v1	-	-
candidate division WWE3 bacterium GW2011_GWB1_42_6	1619115	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.778859	41.7	-	LCED01	48	821	821	5/7/15	6/25/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319664	GCA_000993985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/985/GCA_000993985.2_ASM99398v2	-	-
candidate division Kazan bacterium GW2011_GWB1_45_10	1620411	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.208884	45	-	LCJZ01	23	197	196	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319817	GCA_000994005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/005/GCA_000994005.1_ASM99400v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWA1_40_43	1618553	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.592905	40.3	-	LBZA01	61	683	681	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319531	GCA_000994035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/035/GCA_000994035.1_ASM99403v1	-	-
Candidatus Curtissbacteria bacterium GW2011_GWB1_40_28	1618412	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.997797	40	-	LBYT01	64	1050	1049	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319524	GCA_000994045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/045/GCA_000994045.1_ASM99404v1	-	-
Parcubacteria group bacterium GW2011_GWD1_40_9	1618937	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.64364	39.6	-	LBZZ01	41	676	675	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319556	GCA_000994025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/025/GCA_000994025.1_ASM99402v1	-	-
Candidatus Yanofskybacteria bacterium GW2011_GWA2_44_9	1619025	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.930281	43.9	-	LCJR01	37	981	975	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319809	GCA_000994085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/085/GCA_000994085.1_ASM99408v1	-	-
Microgenomates group bacterium GW2011_GWA2_40_6	1618499	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.5268	39.9	-	LBZH01	50	643	643	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319538	GCA_000994105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/105/GCA_000994105.1_ASM99410v1	-	-
Candidatus Levybacteria bacterium GW2011_GWA2_40_8	1618459	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.700558	39.6	-	LBZT01	30	763	759	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319550	GCA_000994125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/125/GCA_000994125.1_ASM99412v1	-	-
Candidatus Daviesbacteria bacterium GW2011_GWC1_40_9	1618430	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.02405	39.5	-	LBZY01	41	1087	1086	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319555	GCA_000994095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/095/GCA_000994095.1_ASM99409v1	-	-
Candidatus Uhrbacteria bacterium GW2011_GWC2_40_450	1618984	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.899336	41.2	-	LBZC01	31	876	875	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319533	GCA_000994165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/165/GCA_000994165.1_ASM99416v1	-	-
Microgenomates group bacterium GW2011_GWB1_40_9	1618504	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.516374	39.5	-	LBZX01	41	569	568	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319554	GCA_000994175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/175/GCA_000994175.1_ASM99417v1	-	-
candidate division WWE3 bacterium GW2011_GWF1_42_51	1619139	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.352321	42.8	-	LCDZ01	13	339	339	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319660	GCA_000994205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/205/GCA_000994205.1_ASM99420v1	-	-
Candidatus Curtissbacteria bacterium GW2011_GWA2_40_31	1618410	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.628644	40.7	-	LBYX01	34	667	667	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319528	GCA_000994225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/225/GCA_000994225.1_ASM99422v1	-	-
Parcubacteria group bacterium GW2011_GWB1_40_5	1618866	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.59235	39.5	-	LBZE01	46	665	665	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319535	GCA_000994245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/245/GCA_000994245.1_ASM99424v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWF1_40_24	1618601	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.430499	40.3	-	LBYR01	38	474	474	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319522	GCA_000994255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/255/GCA_000994255.1_ASM99425v1	-	-
Candidatus Uhrbacteria bacterium GW2011_GWA2_41_10	1618977	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.575728	41.1	-	LCAD01	15	580	580	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319560	GCA_000994285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/285/GCA_000994285.1_ASM99428v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWA2_40_97	1618735	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.708509	39.4	-	LCAC01	24	759	759	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319559	GCA_000994305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/305/GCA_000994305.1_ASM99430v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWD2_42_50	1618397	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.636934	42	-	LCDX01	42	756	753	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319658	GCA_000994325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/325/GCA_000994325.1_ASM99432v1	-	-
Parcubacteria group bacterium GW2011_GWF1_40_6	1618956	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.560626	39.4	-	LBZI01	53	669	668	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319539	GCA_000994345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/345/GCA_000994345.1_ASM99434v1	-	-
Parcubacteria group bacterium GW2011_GWE2_40_8	1618951	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.683418	39.7	-	LBZS01	58	755	753	5/7/15	6/25/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319549	GCA_000994355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/355/GCA_000994355.2_ASM99435v2	-	-
Candidatus Curtissbacteria bacterium GW2011_GWD1_40_8	1618416	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.788285	39.3	-	LBZR01	78	860	859	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319548	GCA_000994385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/385/GCA_000994385.1_ASM99438v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWB1_41_10	1618577	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.492749	40.5	-	LCAE01	51	598	595	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319561	GCA_000994415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/415/GCA_000994415.1_ASM99441v1	-	-
Microgenomates group bacterium GW2011_GWC1_40_35	1618517	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.905771	39.8	-	LBYY01	43	959	959	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319529	GCA_000994395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/395/GCA_000994395.1_ASM99439v1	-	-
Parcubacteria group bacterium GW2011_GWB2_40_8	1618890	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.602146	39.5	-	LBZQ01	37	664	663	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319547	GCA_000994445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/445/GCA_000994445.1_ASM99444v1	-	-
Parcubacteria group bacterium GW2011_GWF1_40_5	1618955	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.632841	39.3	-	LBZF01	51	691	690	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319536	GCA_000994485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/485/GCA_000994485.1_ASM99448v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWC2_40_30	1618588	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.64737	40.1	-	LBYU01	48	731	729	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319525	GCA_000994465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/465/GCA_000994465.1_ASM99446v1	-	-
Candidatus Wolfebacteria bacterium GW2011_GWC1_43_10	1619011	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.668276	42.6	-	LCFA01	26	685	680	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319687	GCA_000994475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/475/GCA_000994475.1_ASM99447v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWA1_40_8	1618730	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.684009	39.4	-	LBZP01	47	755	755	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319546	GCA_000994515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/515/GCA_000994515.1_ASM99451v1	-	-
Candidatus Giovannonibacteria bacterium GW2011_GWC2_44_8	1618657	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.445117	43.5	-	LCJM01	56	526	526	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319804	GCA_000994555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/555/GCA_000994555.1_ASM99455v1	-	-
Parcubacteria group bacterium GW2011_GWD1_42_9	1618938	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.464301	42.4	-	LCEU01	50	506	506	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319681	GCA_000994575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/575/GCA_000994575.1_ASM99457v1	-	-
Candidatus Daviesbacteria bacterium GW2011_GWA2_40_9	1618424	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.03547	39.6	-	LCAB01	23	1097	1097	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319558	GCA_000994545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/545/GCA_000994545.1_ASM99454v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWA2_40_7	1618562	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.820606	39.8	-	LBZO01	60	994	993	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319545	GCA_000994565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/565/GCA_000994565.1_ASM99456v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWF2_40_31	1618777	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.576032	39.6	-	LBYW01	6	579	578	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319527	GCA_000994625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/625/GCA_000994625.1_ASM99462v1	-	-
Candidatus Levybacteria bacterium GW2011_GWC2_40_7	1618468	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.654024	39.9	-	LBZN01	65	743	739	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319544	GCA_000994635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/635/GCA_000994635.1_ASM99463v1	-	-
Candidatus Roizmanbacteria bacterium GW2011_GWB1_40_7	1618482	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.12473	40.4	-	LBZM01	58	1238	1237	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319543	GCA_000994655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/655/GCA_000994655.1_ASM99465v1	-	-
Parcubacteria group bacterium GW2011_GWA2_40_37	1618817	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.760742	40.4	-	LBYZ01	36	840	840	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319530	GCA_000994675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/675/GCA_000994675.1_ASM99467v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWB1_40_7	1618744	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.5485	39.8	-	LBZL01	26	587	587	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319542	GCA_000994705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/705/GCA_000994705.1_ASM99470v1	-	-
Candidatus Curtissbacteria bacterium GW2011_GWA1_40_47	1618407	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.892301	40	-	LBZD01	59	931	931	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319534	GCA_000994745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/745/GCA_000994745.1_ASM99474v1	-	-
Candidatus Uhrbacteria bacterium GW2011_GWF2_40_263	1618996	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.06822	40.2	-	LBYS01	63	1043	1041	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319523	GCA_000994725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/725/GCA_000994725.1_ASM99472v1	-	-
Candidatus Uhrbacteria bacterium GW2011_GWE2_40_58	1618991	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.778192	40.2	-	LBZG01	37	738	737	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319537	GCA_000994735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/735/GCA_000994735.1_ASM99473v1	-	-
Parcubacteria group bacterium GW2011_GWF2_40_69	1618965	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.77456	40.1	-	LBZJ01	14	819	813	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319540	GCA_000994785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/785/GCA_000994785.1_ASM99478v1	-	-
candidate division WWE3 bacterium GW2011_GWA2_42_9	1619108	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.620476	41.5	-	LCER01	36	659	659	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319678	GCA_000994825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/825/GCA_000994825.1_ASM99482v1	-	-
Candidatus Azambacteria bacterium GW2011_GWA2_42_9	1618613	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.548203	41.1	-	LCEQ01	31	606	605	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319677	GCA_000994805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/805/GCA_000994805.1_ASM99480v1	-	-
candidate division WWE3 bacterium GW2011_GWC2_44_9	1619125	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.712044	44.1	-	LCJU01	53	756	756	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319812	GCA_000994815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/815/GCA_000994815.1_ASM99481v1	-	-
Candidatus Giovannonibacteria bacterium GW2011_GWA1_44_29	1618646	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.749863	44	-	LCIV01	28	793	792	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319787	GCA_000994865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/865/GCA_000994865.1_ASM99486v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWC1_43_10b	1618585	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.323668	43	-	LCEY01	34	347	346	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319685	GCA_000994885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/885/GCA_000994885.1_ASM99488v1	-	-
Candidatus Falkowbacteria bacterium GW2011_GWA2_39_24	1618634	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.528742	38.9	-	LBWS01	55	579	579	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319471	GCA_000994905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/905/GCA_000994905.1_ASM99490v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWA1_39_21b	1618551	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.08791	38.9	-	LBWQ01	47	1159	1159	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319469	GCA_000994895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/895/GCA_000994895.1_ASM99489v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWA1_40_45	1618554	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.288573	40.3	-	LBZB01	25	329	328	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319532	GCA_000994935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/935/GCA_000994935.1_ASM99493v1	-	-
Parcubacteria group bacterium GW2011_GWA2_42_80	1618824	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.504833	42.6	-	LCEP01	44	533	533	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319676	GCA_000994965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/965/GCA_000994965.1_ASM99496v1	-	-
Parcubacteria group bacterium GW2011_GWC1_39_29	1618900	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.5485	39.1	-	LBWT01	49	651	651	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319472	GCA_000994975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/975/GCA_000994975.1_ASM99497v1	-	-
Parcubacteria group bacterium GW2011_GWB1_42_9	1618871	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.637327	41.7	-	LCES01	24	665	662	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319679	GCA_000994995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/994/995/GCA_000994995.1_ASM99499v1	-	-
Candidatus Levybacteria bacterium GW2011_GWA1_39_32	1618454	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.721861	38.6	-	LBWU01	59	841	840	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319473	GCA_000995025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/025/GCA_000995025.1_ASM99502v1	-	-
Candidatus Daviesbacteria bacterium GW2011_GWA2_39_33	1618423	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.27239	38.8	-	LBWV01	22	1291	1291	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319474	GCA_000995045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/045/GCA_000995045.1_ASM99504v1	-	-
candidate division CPR2 bacterium GW2011_GWC2_39_35	1618346	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.12397	39.1	-	LBWX01	9	1125	1125	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319476	GCA_000995065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/065/GCA_000995065.1_ASM99506v1	-	-
Candidatus Levybacteria bacterium GW2011_GWA1_39_34	1618455	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.310453	39.5	-	LBWW01	19	340	339	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319475	GCA_000995075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/075/GCA_000995075.1_ASM99507v1	-	-
Candidatus Gottesmanbacteria bacterium GW2011_GWA1_43_11	1618436	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.42412	43.1	-	LCFB01	54	1516	1512	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319688	GCA_000995105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/105/GCA_000995105.1_ASM99510v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWA2_39_41	1618695	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.608519	38.5	-	LBXA01	32	610	607	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319479	GCA_000995125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/125/GCA_000995125.1_ASM99512v1	-	-
Parcubacteria group bacterium GW2011_GWE2_39_37	1618950	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.96991	38.6	-	LBWY01	49	1026	1026	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319477	GCA_000995135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/135/GCA_000995135.1_ASM99513v1	-	-
Parcubacteria group bacterium GW2011_GWF1_39_37	1618954	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.786985	40.1	-	LBWZ01	7	809	808	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319478	GCA_000995155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/155/GCA_000995155.1_ASM99515v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWC1_42_9	1618584	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.894452	41.4	-	LCET01	19	994	992	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319680	GCA_000995185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/185/GCA_000995185.1_ASM99518v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWC2_39_41	1618754	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.777	39.4	-	LBXB01	15	809	808	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319480	GCA_000995205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/205/GCA_000995205.1_ASM99520v1	-	-
Candidatus Uhrbacteria bacterium GW2011_GWE1_39_46	1618990	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.910236	41.1	-	LBXC01	32	891	888	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319481	GCA_000995215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/215/GCA_000995215.1_ASM99521v1	-	-
candidate division WWE3 bacterium GW2011_GWC2_44_85	1619124	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.861783	43.1	-	LCJP01	15	865	865	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319807	GCA_000995235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/235/GCA_000995235.1_ASM99523v1	-	-
Candidatus Yanofskybacteria bacterium GW2011_GWD2_39_48	1619031	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.469625	39.3	-	LBXD01	44	556	554	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319482	GCA_000995265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/265/GCA_000995265.1_ASM99526v1	-	-
Candidatus Daviesbacteria bacterium GW2011_GWB1_39_5	1618427	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.836375	38.9	-	LBXE01	72	974	972	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319483	GCA_000995285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/285/GCA_000995285.1_ASM99528v1	-	-
Candidatus Peregrinibacteria bacterium GW2011_GWE2_39_6	1619064	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.03544	38.5	-	LBXF01	96	1012	1011	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319484	GCA_000995295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/295/GCA_000995295.1_ASM99529v1	-	-
Candidatus Levybacteria bacterium GW2011_GWB1_39_7	1618464	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.524706	38.4	-	LBXG01	25	566	565	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319485	GCA_000995305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/305/GCA_000995305.1_ASM99530v1	-	-
Microgenomates group bacterium GW2011_GWC1_39_7	1618515	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.572302	38.9	-	LBXH01	68	636	635	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319486	GCA_000995345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/345/GCA_000995345.1_ASM99534v1	-	-
Microgenomates group bacterium GW2011_GWC1_39_7b	1618516	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.538381	39.1	-	LBXI01	43	619	619	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319487	GCA_000995365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/365/GCA_000995365.1_ASM99536v1	-	-
candidate division CPR2 bacterium GW2011_GWD1_39_7	1618347	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.681366	38.4	-	LBXJ01	74	783	782	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319488	GCA_000995385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/385/GCA_000995385.1_ASM99538v1	-	-
Candidatus Gottesmanbacteria bacterium GW2011_GWC1_43_10	1618449	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.41629	42.4	-	LCEX01	56	1459	1459	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319684	GCA_000995415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/415/GCA_000995415.1_ASM99541v1	-	-
candidate division CPR2 bacterium GW2011_GWD2_39_7	1618348	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.07668	39	-	LBXK01	59	1140	1138	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319489	GCA_000995395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/395/GCA_000995395.1_ASM99539v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWA1_39_8	1618552	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.03467	38.7	-	LBXL01	68	1159	1159	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319490	GCA_000995445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/445/GCA_000995445.1_ASM99544v1	-	-
Candidatus Gottesmanbacteria bacterium GW2011_GWC2_39_8	1618450	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.42764	38.7	-	LBXN01	116	1546	1544	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319492	GCA_000995465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/465/GCA_000995465.1_ASM99546v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWF2_42_51	1618403	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.629643	41.9	-	LCEA01	38	723	721	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319661	GCA_000995475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/475/GCA_000995475.1_ASM99547v1	-	-
Candidatus Falkowbacteria bacterium GW2011_GWF2_39_8	1618642	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.986231	38.6	-	LBXO01	79	1039	1038	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319493	GCA_000995525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/525/GCA_000995525.1_ASM99552v1	-	-
Parcubacteria group bacterium GW2011_GWC1_39_8	1618901	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.377962	38.4	-	LBXM01	33	426	426	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319491	GCA_000995485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/485/GCA_000995485.1_ASM99548v1	-	-
Parcubacteria group bacterium GW2011_GWF2_39_8b	1618963	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.445957	38.7	-	LBXP01	38	508	508	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319494	GCA_000995545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/545/GCA_000995545.1_ASM99554v1	-	-
Candidatus Magasanikbacteria bacterium GW2011_GWA2_40_10	1619037	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.337052	39.8	-	LBXR01	18	345	343	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319496	GCA_000995575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/575/GCA_000995575.1_ASM99557v1	-	-
Candidatus Beckwithbacteria bacterium GW2011_GWA2_43_10	1618369	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.585797	43	-	LCEW01	60	698	697	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319683	GCA_000995585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/585/GCA_000995585.1_ASM99558v1	-	-
candidate division CPR2 bacterium GW2011_GWC1_39_9	1618343	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.07193	38.3	-	LBXQ01	61	1131	1131	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319495	GCA_000995565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/565/GCA_000995565.1_ASM99556v1	-	-
Parcubacteria group bacterium GW2011_GWC2_40_10	1618923	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.754116	39.9	-	LBXS01	11	789	783	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319497	GCA_000995625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/625/GCA_000995625.1_ASM99562v1	-	-
Candidatus Daviesbacteria bacterium GW2011_GWA1_42_6	1618420	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.43047	42	-	LCEB01	50	491	491	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319662	GCA_000995645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/645/GCA_000995645.1_ASM99564v1	-	-
Microgenomates group bacterium GW2011_GWB1_44_8	1618505	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.18889	43.7	-	LCJL01	41	1225	1225	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319803	GCA_000995665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/665/GCA_000995665.1_ASM99566v1	-	-
Candidatus Yanofskybacteria bacterium GW2011_GWE1_40_10	1619032	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.681524	43.1	-	LBXT01	39	744	743	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319498	GCA_000995635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/635/GCA_000995635.1_ASM99563v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWE2_40_10	1618766	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.725547	39.3	-	LBXU01	21	753	752	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319499	GCA_000995705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/705/GCA_000995705.1_ASM99570v1	-	-
candidate division WWE3 bacterium GW2011_GWB1_42_41	1619114	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.744997	41.6	-	LCDT01	48	799	799	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319654	GCA_000995715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/715/GCA_000995715.1_ASM99571v1	-	-
Parcubacteria group bacterium GW2011_GWF2_40_10	1618964	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.803342	39.8	-	LBXV01	34	826	824	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319500	GCA_000995735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/735/GCA_000995735.1_ASM99573v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWB1_40_101	1618575	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.310871	40.5	-	LBXW01	32	336	336	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319501	GCA_000995725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/725/GCA_000995725.1_ASM99572v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWB1_40_11	1618743	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.713428	39.3	-	LBXX01	10	736	735	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319502	GCA_000995785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/785/GCA_000995785.1_ASM99578v1	-	-
Candidatus Azambacteria bacterium GW2011_GWE1_42_9	1618624	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.57223	42.4	-	LCEV01	36	629	628	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319682	GCA_000995795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/795/GCA_000995795.1_ASM99579v1	-	-
Parcubacteria group bacterium GW2011_GWC1_40_11	1618902	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.72378	39.3	-	LBXY01	17	750	750	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319503	GCA_000995805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/805/GCA_000995805.1_ASM99580v1	-	-
Parcubacteria group bacterium GW2011_GWD2_43_10	1618945	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.749988	42.5	-	LCEZ01	60	805	802	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319686	GCA_000995845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/845/GCA_000995845.1_ASM99584v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWB1_40_12	1618576	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.552476	40.3	-	LBYA01	44	634	634	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319505	GCA_000995865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/865/GCA_000995865.1_ASM99586v1	-	-
Candidatus Yanofskybacteria bacterium GW2011_GWE2_40_11	1619033	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.745793	42.9	-	LBXZ01	16	793	792	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319504	GCA_000995875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/875/GCA_000995875.1_ASM99587v1	-	-
Candidatus Daviesbacteria bacterium GW2011_GWC2_40_12	1618431	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.27111	38.9	-	LBYB01	20	1315	1309	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319506	GCA_000995905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/905/GCA_000995905.1_ASM99590v1	-	-
Candidatus Uhrbacteria bacterium GW2011_GWF2_44_350	1619000	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.02565	44.4	-	LCJB01	96	1032	1030	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319793	GCA_000995915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/915/GCA_000995915.1_ASM99591v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWF2_40_12	1618776	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.694019	39.2	-	LBYC01	24	760	760	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319507	GCA_000995945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/945/GCA_000995945.1_ASM99594v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWC2_40_12	1618699	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.14145	43.8	-	LBYD01	10	1165	1159	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319508	GCA_000995965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/965/GCA_000995965.1_ASM99596v1	-	-
Candidatus Curtissbacteria bacterium GW2011_GWA1_40_16	1618405	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.954236	40.8	-	LBYI01	59	1037	1037	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319513	GCA_000995995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/995/GCA_000995995.1_ASM99599v1	-	-
Parcubacteria group bacterium GW2011_GWC1_40_13	1618903	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.5694	40.2	-	LBYE01	52	643	639	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319509	GCA_000995985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/995/985/GCA_000995985.1_ASM99598v1	-	-
Parcubacteria group bacterium GW2011_GWA2_40_14	1618814	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.637511	39.1	-	LBYF01	26	692	685	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319510	GCA_000996025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/025/GCA_000996025.1_ASM99602v1	-	-
Parcubacteria group bacterium GW2011_GWA2_40_143	1618815	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.728949	40.1	-	LBYH01	24	747	746	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319512	GCA_000996035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/035/GCA_000996035.1_ASM99603v1	-	-
Candidatus Levybacteria bacterium GW2011_GWA2_40_16	1618458	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.814058	39.8	-	LBYJ01	43	854	854	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319514	GCA_000996065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/065/GCA_000996065.1_ASM99606v1	-	-
Parcubacteria group bacterium GW2011_GWB1_40_14	1618865	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.944541	40.2	-	LBYG01	38	965	963	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319511	GCA_000996085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/085/GCA_000996085.1_ASM99608v1	-	-
Candidatus Magasanikbacteria bacterium GW2011_GWC2_40_17	1619047	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.978289	39.5	-	LBYK01	13	906	903	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319515	GCA_000996105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/105/GCA_000996105.1_ASM99610v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWF1_42_40	1618770	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.644321	42.9	-	LCDR01	43	695	695	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319652	GCA_000996115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/115/GCA_000996115.1_ASM99611v1	-	-
Candidatus Curtissbacteria bacterium GW2011_GWA1_40_24	1618406	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.242364	40.7	-	LBYQ01	21	280	280	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319521	GCA_000996145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/145/GCA_000996145.1_ASM99614v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWD2_40_19	1618595	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.729641	40.1	-	LBYM01	44	796	796	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319517	GCA_000996165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/165/GCA_000996165.1_ASM99616v1	-	-
Parcubacteria group bacterium GW2011_GWA1_40_21	1618784	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.760931	40.4	-	LBYO01	26	792	787	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319519	GCA_000996205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/205/GCA_000996205.1_ASM99620v1	-	-
Parcubacteria group bacterium GW2011_GWE1_40_20	1618946	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.832851	39.9	-	LBYN01	11	868	862	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319518	GCA_000996185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/185/GCA_000996185.1_ASM99618v1	-	-
Candidatus Levybacteria bacterium GW2011_GWC1_40_19	1618466	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.739904	40.2	-	LBYL01	34	823	822	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319516	GCA_000996225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/225/GCA_000996225.1_ASM99622v1	-	-
Parcubacteria group bacterium GW2011_GWA2_40_23	1618816	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.22233	39.7	-	LBYP01	37	1223	1221	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319520	GCA_000996245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/245/GCA_000996245.1_ASM99624v1	-	-
candidate division TM6 bacterium GW2011_GWE2_42_60	1619076	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.13881	41.8	-	LCEG01	6	941	939	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319667	GCA_000996275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/275/GCA_000996275.1_ASM99627v1	-	-
Candidatus Azambacteria bacterium GW2011_GWF1_41_10	1618626	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.627513	42.2	-	LCAF01	8	644	644	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319562	GCA_000996315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/315/GCA_000996315.1_ASM99631v1	-	-
Parcubacteria group bacterium GW2011_GWA1_42_7	1618785	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.523123	42	-	LCEI01	45	587	586	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319669	GCA_000996265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/265/GCA_000996265.1_ASM99626v1	-	-
Candidatus Azambacteria bacterium GW2011_GWA2_42_62	1618612	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.359135	42	-	LCEH01	33	432	431	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319668	GCA_000996285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/285/GCA_000996285.1_ASM99628v1	-	-
Candidatus Curtissbacteria bacterium GW2011_GWA1_41_11	1618409	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.838947	40.6	-	LCAG01	36	922	922	5/7/15	6/25/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319563	GCA_000996345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/345/GCA_000996345.2_ASM99634v2	-	-
Candidatus Azambacteria bacterium GW2011_GWB1_42_72	1618616	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.393369	41.9	-	LCEN01	39	474	474	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319674	GCA_000996375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/375/GCA_000996375.1_ASM99637v1	-	-
Candidatus Uhrbacteria bacterium GW2011_GWC2_41_11	1618985	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.06637	41.4	-	LCAH01	27	1064	1061	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319564	GCA_000996355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/355/GCA_000996355.1_ASM99635v1	-	-
Candidatus Uhrbacteria bacterium GW2011_GWE2_41_1153	1618992	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.484391	40.6	-	LCAI01	54	506	506	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319565	GCA_000996385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/385/GCA_000996385.1_ASM99638v1	-	-
Candidatus Gottesmanbacteria bacterium GW2011_GWA2_41_12	1618440	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.250684	39.8	-	LCAJ01	8	246	246	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319566	GCA_000996425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/425/GCA_000996425.1_ASM99642v1	-	-
Candidatus Wolfebacteria bacterium GW2011_GWB1_41_12	1619006	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.672529	41.5	-	LCAK01	13	690	688	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319567	GCA_000996445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/445/GCA_000996445.1_ASM99644v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWD1_41_12	1618593	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.541352	40.7	-	LCAL01	46	584	584	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319568	GCA_000996475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/475/GCA_000996475.1_ASM99647v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWA2_42_41	1618737	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.541737	42.1	-	LCDS01	41	587	586	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319653	GCA_000996455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/455/GCA_000996455.1_ASM99645v1	-	-
Candidatus Roizmanbacteria bacterium GW2011_GWA1_41_13	1618474	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.02354	40.6	-	LCAN01	55	1110	1109	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319570	GCA_000996505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/505/GCA_000996505.1_ASM99650v1	-	-
Candidatus Uhrbacteria bacterium GW2011_GWD2_41_121	1618988	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.793278	41.3	-	LCAM01	29	777	776	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319569	GCA_000996525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/525/GCA_000996525.1_ASM99652v1	-	-
Candidatus Falkowbacteria bacterium GW2011_GWA2_41_14	1618635	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.45029	41.6	-	LCAP01	15	456	455	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319572	GCA_000996575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/575/GCA_000996575.1_ASM99657v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWA1_41_13b	1618555	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.755886	41.1	-	LCAO01	29	825	825	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319571	GCA_000996545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/545/GCA_000996545.1_ASM99654v1	-	-
Candidatus Daviesbacteria bacterium GW2011_GWB1_41_15	1618428	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.07093	39.7	-	LCAQ01	9	1107	1103	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319573	GCA_000996555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/555/GCA_000996555.1_ASM99655v1	-	-
Parcubacteria group bacterium GW2011_GWA1_47_8	1618793	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.840363	47.1	-	LCOP01	53	891	891	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319938	GCA_000996605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/605/GCA_000996605.1_ASM99660v1	-	-
candidate division WWE3 bacterium GW2011_GWD1_42_70	1619127	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.773748	41.5	-	LCEM01	28	789	789	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319673	GCA_000996615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/615/GCA_000996615.1_ASM99661v1	-	-
Candidatus Levybacteria bacterium GW2011_GWA2_41_15	1618460	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.767859	40.4	-	LCAR01	25	821	819	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319574	GCA_000996635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/635/GCA_000996635.1_ASM99663v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWE2_42_48	1618400	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.674282	41.8	-	LCDW01	41	786	783	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319657	GCA_000996665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/665/GCA_000996665.1_ASM99666v1	-	-
Candidatus Uhrbacteria bacterium GW2011_GWD1_41_16	1618987	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.901099	41.1	-	LCAS01	42	877	874	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319575	GCA_000996685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/685/GCA_000996685.1_ASM99668v1	-	-
candidate division TM6 bacterium GW2011_GWE2_41_16	1619075	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.940304	41.2	-	LCAT01	35	856	854	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319576	GCA_000996695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/695/GCA_000996695.1_ASM99669v1	-	-
Candidatus Uhrbacteria bacterium GW2011_GWF2_41_16	1618997	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.25214	41.3	-	LCAU01	47	1273	1271	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319577	GCA_000996715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/715/GCA_000996715.1_ASM99671v1	-	-
Candidatus Magasanikbacteria bacterium GW2011_GWC2_41_17	1619048	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.757774	41.5	-	LCAV01	42	770	770	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319578	GCA_000996735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/735/GCA_000996735.1_ASM99673v1	-	-
Candidatus Uhrbacteria bacterium GW2011_GWC1_41_20	1618983	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.915262	41.1	-	LCAW01	30	883	882	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319579	GCA_000996765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/765/GCA_000996765.1_ASM99676v1	-	-
Microgenomates group bacterium GW2011_GWC1_41_20	1618518	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.496224	40.5	-	LCAX01	35	553	553	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319580	GCA_000996785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/785/GCA_000996785.1_ASM99678v1	-	-
Parcubacteria group bacterium GW2011_GWF2_42_7	1618966	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.713609	41	-	LCEL01	68	858	857	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319672	GCA_000996815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/815/GCA_000996815.1_ASM99681v1	-	-
Candidatus Levybacteria bacterium GW2011_GWB1_41_21	1618465	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.567737	40.4	-	LCAY01	42	652	651	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319581	GCA_000996805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/805/GCA_000996805.1_ASM99680v1	-	-
Parcubacteria group bacterium GW2011_GWF2_44_8	1618971	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.515718	44.4	-	LCJN01	64	585	583	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319805	GCA_000996845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/845/GCA_000996845.1_ASM99684v1	-	-
Candidatus Curtissbacteria bacterium GW2011_GWC2_41_21	1618415	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.09913	40.1	-	LCAZ01	43	1147	1141	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319582	GCA_000996865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/865/GCA_000996865.1_ASM99686v1	-	-
Candidatus Yanofskybacteria bacterium GW2011_GWA2_41_22	1619023	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.250088	40.7	-	LCBA01	15	261	259	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319583	GCA_000996885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/885/GCA_000996885.1_ASM99688v1	-	-
candidate division WWE3 bacterium GW2011_GWC2_41_23	1619123	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.837228	41.2	-	LCBB01	18	825	825	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319584	GCA_000996895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/895/GCA_000996895.1_ASM99689v1	-	-
Candidatus Curtissbacteria bacterium GW2011_GWA2_41_24	1618411	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.0465	39.9	-	LCBC01	30	1085	1085	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319585	GCA_000996905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/905/GCA_000996905.1_ASM99690v1	-	-
Parcubacteria group bacterium GW2011_GWA1_Parcubacteria_45_10	1618789	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.447724	45.1	-	LCJX01	26	494	493	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319815	GCA_000996945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/945/GCA_000996945.1_ASM99694v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWE1_41_24	1618597	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.533306	40.3	-	LCBD01	44	587	587	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319586	GCA_000996975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/975/GCA_000996975.1_ASM99697v1	-	-
Candidatus Magasanikbacteria bacterium GW2011_GWE2_42_7	1619052	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.03536	42.5	-	LCEK01	74	1089	1085	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319671	GCA_000996965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/965/GCA_000996965.1_ASM99696v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWA2_41_25	1618736	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.461027	40.9	-	LCBE01	17	467	467	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319587	GCA_000996985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/996/985/GCA_000996985.1_ASM99698v1	-	-
candidate division WWE3 bacterium GW2011_GWE1_41_27	1619131	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.726676	42.5	-	LCBF01	51	773	773	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319588	GCA_000997025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/025/GCA_000997025.1_ASM99702v1	-	-
Parcubacteria group bacterium GW2011_GWB1_41_4	1618867	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.439451	40.6	-	LCBH01	47	503	503	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319590	GCA_000997045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/045/GCA_000997045.1_ASM99704v1	-	-
Candidatus Uhrbacteria bacterium GW2011_GWB2_41_36	1618982	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.771743	41.3	-	LCBG01	24	749	746	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319589	GCA_000997055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/055/GCA_000997055.1_ASM99705v1	-	-
Candidatus Uhrbacteria bacterium GW2011_GWF2_41_40	1618998	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.915589	41.2	-	LCBI01	37	895	892	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319591	GCA_000997065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/065/GCA_000997065.1_ASM99706v1	-	-
Candidatus Daviesbacteria bacterium GW2011_GWA2_42_7	1618425	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.765206	42.2	-	LCEJ01	73	873	866	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319670	GCA_000997105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/105/GCA_000997105.1_ASM99710v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWA2_44_99	1618380	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.628334	43.8	-	LCJW01	56	763	763	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319814	GCA_000997125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/125/GCA_000997125.1_ASM99712v1	-	-
Candidatus Uhrbacteria bacterium GW2011_GWF2_41_430	1618999	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.676991	40.9	-	LCBJ01	69	719	719	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319592	GCA_000997135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/135/GCA_000997135.1_ASM99713v1	-	-
candidate division WWE3 bacterium GW2011_GWF2_41_45	1619141	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.848675	41.3	-	LCBK01	27	854	854	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319593	GCA_000997145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/145/GCA_000997145.1_ASM99714v1	-	-
candidate division CPR2 bacterium GW2011_GWC1_41_48	1618344	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.11713	39.1	-	LCBL01	10	1116	1116	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319594	GCA_000997185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/185/GCA_000997185.1_ASM99718v1	-	-
Parcubacteria group bacterium GW2011_GWB1_41_5	1618868	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.490716	40.9	-	LCBM01	52	571	570	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319595	GCA_000997205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/205/GCA_000997205.1_ASM99720v1	-	-
candidate division WWE3 bacterium GW2011_GWF1_41_53	1619137	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.464924	40.8	-	LCBO01	12	482	482	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319597	GCA_000997235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/235/GCA_000997235.1_ASM99723v1	-	-
Candidatus Daviesbacteria bacterium GW2011_GWB1_41_5	1618429	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.03108	40.8	-	LCBN01	93	1229	1228	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319596	GCA_000997225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/225/GCA_000997225.1_ASM99722v1	-	-
Candidatus Magasanikbacteria bacterium GW2011_GWA2_41_55	1619038	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.479744	41.1	-	LCBP01	35	515	515	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319598	GCA_000997275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/275/GCA_000997275.1_ASM99727v1	-	-
Parcubacteria group bacterium GW2011_GWF2_44_8b	1618972	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.511466	43.8	-	LCJO01	50	607	607	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319806	GCA_000997265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/265/GCA_000997265.1_ASM99726v1	-	-
Candidatus Yanofskybacteria bacterium GW2011_GWA1_41_6	1619020	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.305269	41.3	-	LCBQ01	40	323	323	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319599	GCA_000997305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/305/GCA_000997305.1_ASM99730v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWF1_42_50	1618401	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.418396	42.5	-	LCDY01	36	496	494	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319659	GCA_000997315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/315/GCA_000997315.1_ASM99731v1	-	-
Parcubacteria group bacterium GW2011_GWB1_41_6	1618869	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.58614	41.6	-	LCBR01	44	668	667	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319600	GCA_000997345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/345/GCA_000997345.1_ASM99734v1	-	-
candidate division WWE3 bacterium GW2011_GWB1_41_6	1619112	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.938148	41.4	-	LCBS01	54	1058	1057	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319601	GCA_000997355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/355/GCA_000997355.1_ASM99735v1	-	-
Candidatus Daviesbacteria bacterium GW2011_GWA1_41_61	1618419	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.05566	39.7	-	LCBT01	7	1089	1085	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319602	GCA_000997385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/385/GCA_000997385.1_ASM99738v1	-	-
Parcubacteria group bacterium GW2011_GWF2_44_7	1618970	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.372244	42.2	-	LCJK01	19	420	420	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319802	GCA_000997395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/395/GCA_000997395.1_ASM99739v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWA1_41_7	1618556	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.548199	40.7	-	LCBU01	54	644	644	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319603	GCA_000997405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/405/GCA_000997405.1_ASM99740v1	-	-
Candidatus Uhrbacteria bacterium GW2011_GWB1_41_7	1618981	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.911173	41.1	-	LCBV01	34	883	882	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319604	GCA_000997445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/445/GCA_000997445.1_ASM99744v1	-	-
Parcubacteria group bacterium GW2011_GWC1_41_7	1618904	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.487691	40.8	-	LCBW01	33	535	534	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319605	GCA_000997465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/465/GCA_000997465.1_ASM99746v1	-	-
Parcubacteria group bacterium GW2011_GWB1_42_6	1618870	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.731091	42.5	-	LCEC01	55	783	783	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319663	GCA_000997475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/475/GCA_000997475.1_ASM99747v1	-	-
Candidatus Roizmanbacteria bacterium GW2011_GWC2_41_7	1618487	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.921819	40.5	-	LCBY01	101	1049	1049	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319607	GCA_000997505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/505/GCA_000997505.1_ASM99750v1	-	-
candidate division WWE3 bacterium GW2011_GWC1_41_7	1619119	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.834875	41.3	-	LCBX01	70	971	968	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319606	GCA_000997495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/495/GCA_000997495.1_ASM99749v1	-	-
candidate division WWE3 bacterium GW2011_GWE1_41_72	1619132	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.705146	41.3	-	LCBZ01	20	699	699	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319608	GCA_000997545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/545/GCA_000997545.1_ASM99754v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWA1_42_60	1618375	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.639386	42	-	LCEF01	30	726	720	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319666	GCA_000997565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/565/GCA_000997565.1_ASM99756v1	-	-
Microgenomates group bacterium GW2011_GWC1_41_8	1618519	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.999614	40.6	-	LCCB01	72	1100	1100	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319610	GCA_000997595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/595/GCA_000997595.1_ASM99759v1	-	-
candidate division WWE3 bacterium GW2011_GWA1_41_8	1619103	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.92136	41.2	-	LCCA01	50	1024	1021	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319609	GCA_000997575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/575/GCA_000997575.1_ASM99757v1	-	-
candidate division WWE3 bacterium GW2011_GWA1_42_46	1619105	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.755771	41.6	-	LCDV01	28	766	766	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319656	GCA_000997615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/615/GCA_000997615.1_ASM99761v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWC2_41_8	1618755	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.555791	41.2	-	LCCC01	43	593	593	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319611	GCA_000997645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/645/GCA_000997645.1_ASM99764v1	-	-
Candidatus Jorgensenbacteria bacterium GW2011_GWF2_41_8	1618667	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.583444	40.9	-	LCCD01	55	623	620	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319612	GCA_000997665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/665/GCA_000997665.1_ASM99766v1	-	-
Parcubacteria group bacterium GW2011_GWC2_42_6	1618928	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.410053	41.8	-	LCEE01	47	485	485	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319665	GCA_000997685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/685/GCA_000997685.1_ASM99768v1	-	-
Candidatus Yanofskybacteria bacterium GW2011_GWC2_41_9	1619029	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.624604	41.3	-	LCCE01	54	671	670	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319613	GCA_000997705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/705/GCA_000997705.1_ASM99770v1	-	-
Candidatus Azambacteria bacterium GW2011_GWA1_44_9	1618610	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.676385	43.4	-	LCJQ01	31	730	730	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319808	GCA_000997715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/715/GCA_000997715.1_ASM99771v1	-	-
Candidatus Wolfebacteria bacterium GW2011_GWA2_42_10	1619004	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.468946	42.2	-	LCCF01	11	500	498	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319614	GCA_000997755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/755/GCA_000997755.1_ASM99775v1	-	-
Parcubacteria group bacterium GW2011_GWA2_42_11	1618819	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.543191	42	-	LCCH01	9	545	545	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319616	GCA_000997765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/765/GCA_000997765.1_ASM99776v1	-	-
candidate division WWE3 bacterium GW2011_GWF2_42_42	1619142	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.751963	42.4	-	LCDU01	36	790	790	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319655	GCA_000997745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/745/GCA_000997745.1_ASM99774v1	-	-
candidate division WWE3 bacterium GW2011_GWC1_42_102	1619120	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.625951	41.6	-	LCCG01	51	689	689	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319615	GCA_000997795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/795/GCA_000997795.1_ASM99779v1	-	-
Parcubacteria group bacterium GW2011_GWC1_42_11	1618905	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.689365	42.3	-	LCCI01	23	742	742	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319617	GCA_000997825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/825/GCA_000997825.1_ASM99782v1	-	-
Parcubacteria group bacterium GW2011_GWC2_42_11	1618925	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.660401	42.1	-	LCCJ01	48	697	697	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319618	GCA_000997835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/835/GCA_000997835.1_ASM99783v1	-	-
candidate division WWE3 bacterium GW2011_GWD2_42_11	1619129	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.77078	41.6	-	LCCK01	35	778	778	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319619	GCA_000997865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/865/GCA_000997865.1_ASM99786v1	-	-
candidate division WWE3 bacterium GW2011_GWB1_42_117	1619113	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.879042	42.9	-	LCCL01	19	890	890	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319620	GCA_000997875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/875/GCA_000997875.1_ASM99787v1	-	-
candidate division WWE3 bacterium GW2011_GWA1_42_12	1619104	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.864275	41.8	-	LCCM01	29	875	875	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319621	GCA_000997905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/905/GCA_000997905.1_ASM99790v1	-	-
Candidatus Amesbacteria bacterium GW2011_GWA2_42_12	1618356	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.711674	41.6	-	LCCN01	37	830	823	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319622	GCA_000997915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/915/GCA_000997915.1_ASM99791v1	-	-
Parcubacteria group bacterium GW2011_GWC2_42_12	1618926	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.03261	41.7	-	LCCP01	48	964	962	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319624	GCA_000997945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/945/GCA_000997945.1_ASM99794v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWB2_42_12	1618386	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.741021	42	-	LCCO01	22	810	809	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319623	GCA_000997955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/955/GCA_000997955.1_ASM99795v1	-	-
Parcubacteria group bacterium GW2011_GWC2_42_13	1618927	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.559253	42.2	-	LCCQ01	33	620	616	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319625	GCA_000997985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/985/GCA_000997985.1_ASM99798v1	-	-
candidate division WWE3 bacterium GW2011_GWD1_42_14	1619126	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.577149	41.4	-	LCCR01	32	599	599	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319626	GCA_000997995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/997/995/GCA_000997995.1_ASM99799v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWB1_44_6	1618384	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.964574	43.4	-	LCJG01	67	1107	1107	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319798	GCA_000998025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/025/GCA_000998025.1_ASM99802v1	-	-
candidate division WWE3 bacterium GW2011_GWF1_42_14	1619138	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.942732	41.7	-	LCCU01	37	977	977	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319629	GCA_000998055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/055/GCA_000998055.1_ASM99805v1	-	-
Parcubacteria group bacterium GW2011_GWD2_42_14	1618944	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.07779	42	-	LCCS01	44	1091	1088	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319627	GCA_000998045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/045/GCA_000998045.1_ASM99804v1	-	-
Parcubacteria group bacterium GW2011_GWE2_42_14	1618952	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.816353	40.2	-	LCCT01	14	852	846	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319628	GCA_000998065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/065/GCA_000998065.1_ASM99806v1	-	-
Microgenomates group bacterium GW2011_GWC1_44_37	1618524	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.942035	43.9	-	LCJC01	34	1014	1014	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319794	GCA_000998105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/105/GCA_000998105.1_ASM99810v1	-	-
candidate division WWE3 bacterium GW2011_GWE1_44_51	1619134	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.835093	43.1	-	LCJF01	11	835	834	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319797	GCA_000998145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/145/GCA_000998145.1_ASM99814v1	-	-
Candidatus Giovannonibacteria bacterium GW2011_GWA1_44_25	1618645	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.962773	44.1	-	LCIR01	36	1045	1045	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319783	GCA_000998125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/125/GCA_000998125.1_ASM99812v1	-	-
Parcubacteria group bacterium GW2011_GWA2_42_14	1618820	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.24428	41.3	-	LCCV01	19	1252	1246	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319630	GCA_000998135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/135/GCA_000998135.1_ASM99813v1	-	-
Candidatus Kuenenbacteria bacterium GW2011_GWA2_42_15	1618677	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.81365	41.9	-	LCCW01	69	839	832	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319631	GCA_000998185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/185/GCA_000998185.1_ASM99818v1	-	-
Candidatus Giovannonibacteria bacterium GW2011_GWC2_44_9	1618658	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.745743	44	-	LCJT01	42	814	814	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319811	GCA_000998195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/195/GCA_000998195.1_ASM99819v1	-	-
candidate division WWE3 bacterium GW2011_GWE1_42_16	1619133	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.778466	41.6	-	LCCX01	29	786	786	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319632	GCA_000998215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/215/GCA_000998215.1_ASM99821v1	-	-
Candidatus Gottesmanbacteria bacterium GW2011_GWA2_42_16	1618441	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.32505	42.3	-	LCCY01	45	1378	1378	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319633	GCA_000998235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/235/GCA_000998235.1_ASM99823v1	-	-
candidate division CPR1 bacterium GW2011_GWA2_42_17	1618341	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.691409	42.1	-	LCCZ01	62	700	698	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319634	GCA_000998265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/265/GCA_000998265.1_ASM99826v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWA2_42_17	1618378	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.730827	42	-	LCDA01	15	805	800	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319635	GCA_000998275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/275/GCA_000998275.1_ASM99827v1	-	-
Candidatus Azambacteria bacterium GW2011_GWB1_42_17	1618615	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.543986	41.3	-	LCDB01	32	582	582	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319636	GCA_000998315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/315/GCA_000998315.1_ASM99831v1	-	-
Microgenomates group bacterium GW2011_GWA1_Microgenomates_45_10	1618493	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.465807	44.8	-	LCJY01	32	523	523	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319816	GCA_000998305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/305/GCA_000998305.1_ASM99830v1	-	-
Parcubacteria group bacterium GW2011_GWA2_42_18	1618821	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.559159	41.6	-	LCDC01	42	606	606	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319637	GCA_000998345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/345/GCA_000998345.1_ASM99834v1	-	-
Candidatus Gottesmanbacteria bacterium GW2011_GWA2_42_18	1618442	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.24128	42.3	-	LCDD01	53	1324	1324	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319638	GCA_000998355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/355/GCA_000998355.1_ASM99835v1	-	-
Microgenomates group bacterium GW2011_GWC1_44_9	1618525	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.733445	43.5	-	LCJS01	59	858	858	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319810	GCA_000998385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/385/GCA_000998385.1_ASM99838v1	-	-
Candidatus Azambacteria bacterium GW2011_GWA1_42_19	1618609	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.544781	41.5	-	LCDE01	36	603	603	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319639	GCA_000998395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/395/GCA_000998395.1_ASM99839v1	-	-
Candidatus Giovannonibacteria bacterium GW2011_GWF2_42_19	1618659	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.877983	41.9	-	LCDF01	48	936	934	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319640	GCA_000998435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/435/GCA_000998435.1_ASM99843v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWC2_42_20	1618756	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.678769	42.4	-	LCDG01	17	737	736	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319641	GCA_000998425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/425/GCA_000998425.1_ASM99842v1	-	-
Parcubacteria group bacterium GW2011_GWC1_42_21	1618906	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.687683	42.8	-	LCDH01	18	713	713	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319642	GCA_000998465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/465/GCA_000998465.1_ASM99846v1	-	-
Candidatus Wolfebacteria bacterium GW2011_GWD2_47_17	1619015	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.962673	46.8	-	LCNY01	6	989	987	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319921	GCA_000998475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/475/GCA_000998475.1_ASM99847v1	-	-
Candidatus Azambacteria bacterium GW2011_GWF2_42_22	1618627	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.625872	42.3	-	LCDI01	9	641	639	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319643	GCA_000998505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/505/GCA_000998505.1_ASM99850v1	-	-
Candidatus Uhrbacteria bacterium GW2011_GWA2_42_220	1618978	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.904718	41.2	-	LCDJ01	31	882	881	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319644	GCA_000998515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/515/GCA_000998515.1_ASM99851v1	-	-
candidate division WWE3 bacterium GW2011_GWE2_42_25	1619135	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.782405	41.6	-	LCDK01	18	780	780	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319645	GCA_000998555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/555/GCA_000998555.1_ASM99855v1	-	-
Candidatus Amesbacteria bacterium GW2011_GWA1_44_24	1618351	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.08478	46.3	-	LCIP01	19	1129	1129	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319781	GCA_000998545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/545/GCA_000998545.1_ASM99854v1	-	-
Parcubacteria group bacterium GW2011_GWC1_44_26	1618913	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.471225	44.1	-	LCIS01	38	555	555	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319784	GCA_000998585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/585/GCA_000998585.1_ASM99858v1	-	-
Candidatus Gottesmanbacteria bacterium GW2011_GWA1_42_26	1618435	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.46077	42.4	-	LCDL01	70	1544	1542	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319646	GCA_000998605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/605/GCA_000998605.1_ASM99860v1	-	-
Candidatus Giovannonibacteria bacterium GW2011_GWA2_44_26	1618648	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.939887	43.5	-	LCIT01	48	1054	1054	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319785	GCA_000998625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/625/GCA_000998625.1_ASM99862v1	-	-
Candidatus Magasanikbacteria bacterium GW2011_GWC2_42_27	1619049	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.1379	43	-	LCDM01	20	1156	1154	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319647	GCA_000998635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/635/GCA_000998635.1_ASM99863v1	-	-
Parcubacteria group bacterium GW2011_GWA2_42_28	1618822	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.516205	42.5	-	LCDN01	25	524	524	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319648	GCA_000998665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/665/GCA_000998665.1_ASM99866v1	-	-
Candidatus Magasanikbacteria bacterium GW2011_GWA2_42_32	1619039	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.43811	40.4	-	LCDO01	51	1432	1429	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319649	GCA_000998685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/685/GCA_000998685.1_ASM99868v1	-	-
candidate division WWE3 bacterium GW2011_GWD2_42_34	1619130	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.887205	42.9	-	LCDP01	14	885	885	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319650	GCA_000998705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/705/GCA_000998705.1_ASM99870v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWD1_44_27	1618396	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.02788	44	-	LCIU01	33	1082	1082	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319786	GCA_000998715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/715/GCA_000998715.1_ASM99871v1	-	-
Parcubacteria group bacterium GW2011_GWA2_42_35	1618823	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.408508	42.5	-	LCDQ01	41	481	478	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319651	GCA_000998745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/745/GCA_000998745.1_ASM99874v1	-	-
candidate division WWE3 bacterium GW2011_GWB1_44_4	1619116	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.425048	44.2	-	LCJD01	45	487	487	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319795	GCA_000998765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/765/GCA_000998765.1_ASM99876v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWA2_44_33	1618564	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.858506	44.2	-	LCIY01	56	945	945	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319790	GCA_000998775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/775/GCA_000998775.1_ASM99877v1	-	-
Parcubacteria group bacterium GW2011_GWA2_43_11	1618825	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.929441	42.2	-	LCFC01	47	972	972	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319689	GCA_000998805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/805/GCA_000998805.1_ASM99880v1	-	-
Candidatus Gottesmanbacteria bacterium GW2011_GWB1_43_11	1618446	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.48053	42.5	-	LCFD01	34	1524	1524	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319690	GCA_000998825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/825/GCA_000998825.1_ASM99882v1	-	-
Parcubacteria group bacterium GW2011_GWF2_43_11	1618967	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.438332	43	-	LCFH01	41	542	539	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319694	GCA_000998855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/855/GCA_000998855.1_ASM99885v1	-	-
Parcubacteria group bacterium GW2011_GWC1_43_11	1618907	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.657246	41.8	-	LCFE01	38	698	698	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319691	GCA_000998845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/845/GCA_000998845.1_ASM99884v1	-	-
Microgenomates group bacterium GW2011_GWC1_43_11	1618520	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.07643	42.7	-	LCFF01	65	1121	1121	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319692	GCA_000998865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/865/GCA_000998865.1_ASM99886v1	-	-
Parcubacteria group bacterium GW2011_GWC1_43_11b	1618908	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.687679	42.3	-	LCFG01	41	744	744	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319693	GCA_000998905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/905/GCA_000998905.1_ASM99890v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWA1_43_12	1618557	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.754289	40	-	LCFI01	13	763	763	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319695	GCA_000998925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/925/GCA_000998925.1_ASM99892v1	-	-
Parcubacteria group bacterium GW2011_GWC1_43_12	1618909	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.757207	42.6	-	LCFJ01	37	794	793	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319696	GCA_000998935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/935/GCA_000998935.1_ASM99893v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWC2_43_12	1618390	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.867547	43.2	-	LCFK01	74	961	961	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319697	GCA_000998965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/965/GCA_000998965.1_ASM99896v1	-	-
Parcubacteria group bacterium GW2011_GWE2_43_12	1618953	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.654613	42.5	-	LCFL01	46	713	711	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319698	GCA_000998975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/998/975/GCA_000998975.1_ASM99897v1	-	-
Parcubacteria group bacterium GW2011_GWD1_44_9	1618939	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.409733	43.7	-	LCJV01	47	492	492	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319813	GCA_000999005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/005/GCA_000999005.1_ASM99900v1	-	-
Parcubacteria group bacterium GW2011_GWA2_43_13	1618826	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.971252	43.5	-	LCFM01	27	883	883	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319699	GCA_000999025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/025/GCA_000999025.1_ASM99902v1	-	-
Parcubacteria group bacterium GW2011_GWA2_47_64	1618845	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.07172	47.5	-	LCOL01	49	1102	1097	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319934	GCA_000999035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/035/GCA_000999035.1_ASM99903v1	-	-
Microgenomates group bacterium GW2011_GWC1_43_13	1618521	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.707442	43.1	-	LCFN01	27	764	764	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319700	GCA_000999065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/065/GCA_000999065.1_ASM99906v1	-	-
Candidatus Gottesmanbacteria bacterium GW2011_GWA2_43_14	1618443	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.65063	43.2	-	LCFP01	24	1699	1699	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319702	GCA_000999095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/095/GCA_000999095.1_ASM99909v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWB1_43_14	1618578	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.904129	41.8	-	LCFQ01	14	924	922	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319703	GCA_000999115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/115/GCA_000999115.1_ASM99911v1	-	-
Candidatus Giovannonibacteria bacterium GW2011_GWB1_43_13	1618651	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.707203	42.9	-	LCFO01	27	786	784	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319701	GCA_000999085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/085/GCA_000999085.1_ASM99908v1	-	-
Candidatus Giovannonibacteria bacterium GW2011_GWA1_43_15	1618644	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.675871	42.8	-	LCFR01	23	749	749	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319704	GCA_000999145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/145/GCA_000999145.1_ASM99914v1	-	-
Candidatus Gottesmanbacteria bacterium GW2011_GWA1_44_24b	1618437	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.00676	43.2	-	LCIQ01	73	1035	1031	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319782	GCA_000999165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/165/GCA_000999165.1_ASM99916v1	-	-
Parcubacteria group bacterium GW2011_GWB1_44_7	1618876	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.610871	43.5	-	LCJJ01	39	665	663	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319801	GCA_000999175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/175/GCA_000999175.1_ASM99917v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWA2_43_15	1618738	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.735946	43.2	-	LCFS01	28	776	776	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319705	GCA_000999185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/185/GCA_000999185.1_ASM99918v1	-	-
Candidatus Giovannonibacteria bacterium GW2011_GWB1_47_6b	1618655	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.688017	47.5	-	LCOK01	56	770	761	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319933	GCA_000999225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/225/GCA_000999225.1_ASM99922v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWA1_43_17	1618731	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.651949	43	-	LCFT01	18	673	673	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319706	GCA_000999245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/245/GCA_000999245.1_ASM99924v1	-	-
Parcubacteria group bacterium GW2011_GWA2_43_17	1618827	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.30182	45	-	LCFU01	81	1241	1239	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319707	GCA_000999255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/255/GCA_000999255.1_ASM99925v1	-	-
candidate division TM6 bacterium GW2011_GWF2_43_17	1619085	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.383874	43.4	-	LCFV01	23	387	387	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319708	GCA_000999285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/285/GCA_000999285.1_ASM99928v1	-	-
Candidatus Peregrinibacteria bacterium GW2011_GWF2_43_17	1619068	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.20477	43.1	-	LCFW01	16	1137	1135	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319709	GCA_000999315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/315/GCA_000999315.1_ASM99931v1	-	-
candidate division WWE3 bacterium GW2011_GWC1_44_308	1619121	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.849134	43.1	-	LCIX01	18	849	849	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319789	GCA_000999305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/305/GCA_000999305.1_ASM99930v1	-	-
Candidatus Azambacteria bacterium GW2011_GWD1_43_18	1618622	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.586558	42.3	-	LCFX01	7	614	612	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319710	GCA_000999325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/325/GCA_000999325.1_ASM99932v1	-	-
Candidatus Magasanikbacteria bacterium GW2011_GWD2_43_18	1619051	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.14807	43	-	LCFY01	19	1151	1149	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319711	GCA_000999365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/365/GCA_000999365.1_ASM99936v1	-	-
candidate division WWE3 bacterium GW2011_GWE2_43_18	1619136	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.855823	43	-	LCFZ01	18	859	858	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319712	GCA_000999385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/385/GCA_000999385.1_ASM99938v1	-	-
Parcubacteria group bacterium GW2011_GWA2_47_7	1618846	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.939924	46.4	-	LCOM01	65	996	995	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319935	GCA_000999395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/395/GCA_000999395.1_ASM99939v1	-	-
candidate division WWE3 bacterium GW2011_GWF2_43_18	1619143	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.864654	43.1	-	LCGA01	17	867	867	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319713	GCA_000999405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/405/GCA_000999405.1_ASM99940v1	-	-
Candidatus Peregrinibacteria bacterium GW2011_GWA2_44_7	1619057	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.3216	44.7	-	LCJI01	106	1349	1347	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319800	GCA_000999445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/445/GCA_000999445.1_ASM99944v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWB1_43_19	1618745	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.62337	43.3	-	LCGB01	24	653	653	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319714	GCA_000999465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/465/GCA_000999465.1_ASM99946v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWB1_43_20	1618746	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.641067	42.4	-	LCGC01	31	695	695	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319715	GCA_000999475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/475/GCA_000999475.1_ASM99947v1	-	-
candidate division WWE3 bacterium GW2011_GWD1_43_201	1619128	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.866613	43.1	-	LCGD01	10	868	867	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319716	GCA_000999505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/505/GCA_000999505.1_ASM99950v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWB1_47_6	1618749	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.524961	47.4	-	LCOJ01	39	581	581	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319932	GCA_000999515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/515/GCA_000999515.1_ASM99951v1	-	-
Parcubacteria group bacterium GW2011_GWA1_43_21	1618786	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.414799	42.5	-	LCGE01	22	455	454	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319717	GCA_000999545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/545/GCA_000999545.1_ASM99954v1	-	-
candidate division WWE3 bacterium GW2011_GWB2_43_22	1619118	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.402179	43.1	-	LCGF01	39	443	440	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319718	GCA_000999555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/555/GCA_000999555.1_ASM99955v1	-	-
candidate division WWE3 bacterium GW2011_GWA2_43_24	1619109	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.856514	43	-	LCGG01	10	862	862	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319719	GCA_000999585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/585/GCA_000999585.1_ASM99958v1	-	-
Microgenomates group bacterium GW2011_GWA2_44_7	1618500	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.19678	43.5	-	LCJH01	100	1300	1296	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319799	GCA_000999595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/595/GCA_000999595.1_ASM99959v1	-	-
Candidatus Wolfebacteria bacterium GW2011_GWA1_47_6	1619003	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.680802	46.7	-	LCOI01	74	776	775	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319931	GCA_000999635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/635/GCA_000999635.1_ASM99963v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWF2_43_24	1618778	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.643426	43	-	LCGH01	16	667	667	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319720	GCA_000999615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/615/GCA_000999615.1_ASM99961v1	-	-
Candidatus Azambacteria bacterium GW2011_GWC2_43_27	1618620	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.589445	42.3	-	LCGJ01	11	623	622	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319722	GCA_000999665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/665/GCA_000999665.1_ASM99966v1	-	-
Parcubacteria group bacterium GW2011_GWA1_43_27	1618787	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.547727	42.6	-	LCGI01	43	605	603	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319721	GCA_000999675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/675/GCA_000999675.1_ASM99967v1	-	-
Parcubacteria group bacterium GW2011_GWC1_43_30	1618910	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.750314	44	-	LCGK01	43	850	850	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319723	GCA_000999705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/705/GCA_000999705.1_ASM99970v1	-	-
Candidatus Falkowbacteria bacterium GW2011_GWF2_43_32	1618643	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.878791	43.3	-	LCGL01	5	795	794	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319724	GCA_000999715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/715/GCA_000999715.1_ASM99971v1	-	-
Parcubacteria group bacterium GW2011_GWF2_43_38	1618968	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.476337	42.7	-	LCGM01	43	516	514	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319725	GCA_000999745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/745/GCA_000999745.1_ASM99974v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWF1_44_4	1618719	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.657375	43.5	-	LCJE01	70	746	745	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319796	GCA_000999765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/765/GCA_000999765.1_ASM99976v1	-	-
Candidatus Yanofskybacteria bacterium GW2011_GWF2_43_596	1619035	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.599878	43	-	LCGN01	23	667	665	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319726	GCA_000999785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/785/GCA_000999785.1_ASM99978v1	-	-
Candidatus Amesbacteria bacterium GW2011_GWB1_47_26	1618361	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.747913	46.1	-	LCOH01	38	867	867	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319930	GCA_000999805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/805/GCA_000999805.1_ASM99980v1	-	-
Candidatus Curtissbacteria bacterium GW2011_GWC1_44_33	1618413	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.41036	44.1	-	LCIZ01	44	511	510	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319791	GCA_000999815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/815/GCA_000999815.1_ASM99981v1	-	-
Parcubacteria group bacterium GW2011_GWB1_43_6	1618872	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.528603	43	-	LCGO01	49	621	621	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319727	GCA_000999835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/835/GCA_000999835.1_ASM99983v1	-	-
Parcubacteria group bacterium GW2011_GWC1_43_61	1618911	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.562144	42.3	-	LCGP01	24	638	638	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319728	GCA_000999865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/865/GCA_000999865.1_ASM99986v1	-	-
Parcubacteria group bacterium GW2011_GWB1_43_66	1618873	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.349901	42.6	-	LCGQ01	33	368	368	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319729	GCA_000999875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/875/GCA_000999875.1_ASM99987v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWA2_43_66	1618739	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.672177	43.2	-	LCGR01	22	704	704	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319730	GCA_000999885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/885/GCA_000999885.1_ASM99988v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWB1_43_7	1618747	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.727539	43.3	-	LCGS01	35	816	816	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319731	GCA_000999925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/925/GCA_000999925.1_ASM99992v1	-	-
Candidatus Peregrinibacteria bacterium GW2011_GWA2_47_7	1619058	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.671769	46.7	-	LCON01	76	709	709	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319936	GCA_000999945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/945/GCA_000999945.1_ASM99994v1	-	-
Parcubacteria group bacterium GW2011_GWB1_43_8	1618874	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.617947	42.4	-	LCGU01	65	664	664	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319733	GCA_000999975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/975/GCA_000999975.1_ASM99997v1	-	-
Candidatus Peregrinibacteria bacterium GW2011_GWA2_43_8	1619056	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.08232	43	-	LCGT01	45	1086	1085	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319732	GCA_000999965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/999/965/GCA_000999965.1_ASM99996v1	-	-
Candidatus Giovannonibacteria bacterium GW2011_GWC2_43_8	1618656	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.578477	43.1	-	LCGV01	39	678	677	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319734	GCA_001000005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/005/GCA_001000005.1_ASM100000v1	-	-
candidate division TM6 bacterium GW2011_GWF2_43_87	1619086	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.12912	42.3	-	LCGZ01	4	912	910	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319738	GCA_001000065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/065/GCA_001000065.1_ASM100006v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWF2_43_8	1618779	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.658091	42.9	-	LCGX01	56	763	763	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319736	GCA_001000035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/035/GCA_001000035.1_ASM100003v1	-	-
Candidatus Amesbacteria bacterium GW2011_GWA2_47_70	1618359	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.612222	46.1	-	LCOO01	52	726	726	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319937	GCA_001000075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/075/GCA_001000075.1_ASM100007v1	-	-
Parcubacteria group bacterium GW2011_GWE1_43_8	1618947	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.577627	42.5	-	LCGW01	55	641	640	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319735	GCA_001000025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/025/GCA_001000025.1_ASM100002v1	-	-
Parcubacteria group bacterium GW2011_GWB1_43_8b	1618875	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.683696	42.5	-	LCGY01	22	661	658	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319737	GCA_001000105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/105/GCA_001000105.1_ASM100010v1	-	-
Candidatus Magasanikbacteria bacterium GW2011_GWA2_43_9	1619040	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.09392	42.7	-	LCHA01	36	1122	1121	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319739	GCA_001000125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/125/GCA_001000125.1_ASM100012v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWB1_44_35	1618383	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.240795	44.1	-	LCJA01	30	303	300	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319792	GCA_001000135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/135/GCA_001000135.1_ASM100013v1	-	-
Parcubacteria group bacterium GW2011_GWF1_43_9	1618957	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.56975	42.7	-	LCHC01	49	611	609	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319741	GCA_001000185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/185/GCA_001000185.1_ASM100018v1	-	-
Parcubacteria group bacterium GW2011_GWA2_43_9b	1618828	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.834086	42.9	-	LCHB01	47	862	862	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319740	GCA_001000145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/145/GCA_001000145.1_ASM100014v1	-	-
candidate division WWE3 bacterium GW2011_GWA1_43_94	1619106	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.891856	43	-	LCHD01	20	898	898	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319742	GCA_001000215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/215/GCA_001000215.1_ASM100021v1	-	-
Microgenomates group bacterium GW2011_GWE1_47_12	1618535	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.700617	46.7	-	LCNQ01	38	757	755	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319913	GCA_001000205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/205/GCA_001000205.1_ASM100020v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWC2_44_30	1618393	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.03508	44	-	LCIW01	55	1141	1141	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319788	GCA_001000245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/245/GCA_001000245.1_ASM100024v1	-	-
Candidatus Yanofskybacteria bacterium GW2011_GWA2_44_10	1619024	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.518923	43.8	-	LCHE01	23	550	549	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319743	GCA_001000265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/265/GCA_001000265.1_ASM100026v1	-	-
Parcubacteria group bacterium GW2011_GWC1_44_10	1618912	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.830483	44.4	-	LCHF01	42	930	930	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319744	GCA_001000285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/285/GCA_001000285.1_ASM100028v1	-	-
Candidatus Wolfebacteria bacterium GW2011_GWB1_47_243	1619008	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.860711	46.9	-	LCOE01	42	919	917	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319927	GCA_001000305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/305/GCA_001000305.1_ASM100030v1	-	-
Microgenomates group bacterium GW2011_GWC1_44_10	1618522	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.801703	43.4	-	LCHG01	45	894	894	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319745	GCA_001000315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/315/GCA_001000315.1_ASM100031v1	-	-
Microgenomates group bacterium GW2011_GWF1_44_10	1618537	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.06561	43.4	-	LCHI01	21	1089	1089	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319747	GCA_001000345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/345/GCA_001000345.1_ASM100034v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWD1_44_10	1618757	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.445549	44	-	LCHH01	45	525	524	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319746	GCA_001000355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/355/GCA_001000355.1_ASM100035v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWB1_44_11	1618579	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.603817	43.9	-	LCHK01	23	674	673	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319749	GCA_001000385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/385/GCA_001000385.1_ASM100038v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWF2_44_10	1618726	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.13741	44	-	LCHJ01	36	1198	1197	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319748	GCA_001000395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/395/GCA_001000395.1_ASM100039v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWB1_44_11b	1618580	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.244504	43.6	-	LCHL01	29	306	305	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319750	GCA_001000425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/425/GCA_001000425.1_ASM100042v1	-	-
Candidatus Gottesmanbacteria bacterium GW2011_GWB1_44_11c	1618447	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.21582	43.2	-	LCHM01	87	1290	1290	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319751	GCA_001000435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/435/GCA_001000435.1_ASM100043v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWA1_44_12	1618376	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.760225	44.5	-	LCHN01	44	855	855	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319752	GCA_001000475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/475/GCA_001000475.1_ASM100047v1	-	-
Parcubacteria group bacterium GW2011_GWA2_44_12	1618829	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.845893	43.8	-	LCHO01	33	814	813	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319753	GCA_001000505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/505/GCA_001000505.1_ASM100050v1	-	-
Microgenomates group bacterium GW2011_GWD1_47_13	1618534	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.656263	46.5	-	LCNS01	34	715	714	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319915	GCA_001000465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/465/GCA_001000465.1_ASM100046v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWB1_44_12	1618748	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.666168	44.2	-	LCHP01	12	732	732	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319754	GCA_001000515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/515/GCA_001000515.1_ASM100051v1	-	-
Parcubacteria group bacterium GW2011_GWA2_47_21	1618843	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.489564	46.8	-	LCOC01	20	519	519	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319925	GCA_001000545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/545/GCA_001000545.1_ASM100054v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWF1_44_12	1618402	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.61355	44.6	-	LCHQ01	42	699	697	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319755	GCA_001000565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/565/GCA_001000565.1_ASM100056v1	-	-
Parcubacteria group bacterium GW2011_GWA2_44_13	1618830	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.79652	43.6	-	LCHS01	44	902	901	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319757	GCA_001000585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/585/GCA_001000585.1_ASM100058v1	-	-
Parcubacteria group bacterium GW2011_GWA1_44_13	1618788	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.686921	44.2	-	LCHR01	17	747	747	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319756	GCA_001000595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/595/GCA_001000595.1_ASM100059v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWC2_44_13	1618391	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.872515	44.4	-	LCHT01	16	944	940	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319758	GCA_001000625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/625/GCA_001000625.1_ASM100062v1	-	-
Candidatus Giovannonibacteria bacterium GW2011_GWA2_44_13b	1618647	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.670216	43.9	-	LCHU01	29	759	759	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319759	GCA_001000645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/645/GCA_001000645.1_ASM100064v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWA2_44_13	1618379	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.08943	44	-	LCHV01	23	1159	1159	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319760	GCA_001000665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/665/GCA_001000665.1_ASM100066v1	-	-
candidate division WWE3 bacterium GW2011_GWF1_44_14	1619140	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.839128	43.1	-	LCHX01	19	839	839	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319762	GCA_001000705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/705/GCA_001000705.1_ASM100070v1	-	-
Candidatus Wolfebacteria bacterium GW2011_GWE2_44_13	1619017	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.922656	43.5	-	LCHW01	5	943	941	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319761	GCA_001000675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/675/GCA_001000675.1_ASM100067v1	-	-
Parcubacteria group bacterium GW2011_GWA2_44_15	1618831	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.302454	43.7	-	LCHY01	17	278	277	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319763	GCA_001000715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/715/GCA_001000715.1_ASM100071v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWF2_44_15	1618404	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.754272	44.4	-	LCHZ01	51	854	851	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319764	GCA_001000745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/745/GCA_001000745.1_ASM100074v1	-	-
candidate division WWE3 bacterium GW2011_GWA2_44_16	1619110	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.366251	44.5	-	LCIA01	9	366	366	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319765	GCA_001000765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/765/GCA_001000765.1_ASM100076v1	-	-
Candidatus Gottesmanbacteria bacterium GW2011_GWA2_44_17	1618444	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.614589	43.5	-	LCIB01	47	652	652	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319766	GCA_001000775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/775/GCA_001000775.1_ASM100077v1	-	-
candidate division WWE3 bacterium GW2011_GWB1_47_11	1619117	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.476491	46.4	-	LCNN01	37	524	523	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319910	GCA_001000825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/825/GCA_001000825.1_ASM100082v1	-	-
Parcubacteria group bacterium GW2011_GWF2_44_17	1618969	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.892036	43.7	-	LCID01	61	949	947	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319769	GCA_001000815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/815/GCA_001000815.1_ASM100081v1	-	-
Parcubacteria group bacterium GW2011_GWC2_44_17	1618929	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.06316	43.9	-	LCIC01	37	1067	1065	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319768	GCA_001000795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/795/GCA_001000795.1_ASM100079v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWC2_44_18	1618392	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.860944	43.5	-	LCIE01	38	965	965	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319770	GCA_001000865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/865/GCA_001000865.1_ASM100086v1	-	-
Candidatus Gottesmanbacteria bacterium GW2011_GWA1_47_8	1618438	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.282303	46.8	-	LCOQ01	18	336	336	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319939	GCA_001000895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/895/GCA_001000895.1_ASM100089v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWB1_44_197	1618382	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.607153	43.6	-	LCIF01	61	684	684	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319771	GCA_001000885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/885/GCA_001000885.1_ASM100088v1	-	-
Candidatus Yanofskybacteria bacterium GW2011_GWA1_44_21	1619021	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.393583	43.5	-	LCIG01	13	418	414	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319772	GCA_001000905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/905/GCA_001000905.1_ASM100090v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWB2_44_22	1618387	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.09	44	-	LCIH01	22	1168	1168	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319773	GCA_001000965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/965/GCA_001000965.1_ASM100096v1	-	-
Candidatus Wolfebacteria bacterium GW2011_GWE2_47_12	1619018	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.955726	46.8	-	LCNR01	13	1004	1002	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319914	GCA_001000945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/945/GCA_001000945.1_ASM100094v1	-	-
Parcubacteria group bacterium GW2011_GWC2_44_22	1618930	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.24524	43.3	-	LCII01	69	1217	1216	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319774	GCA_001000955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/000/955/GCA_001000955.1_ASM100095v1	-	-
Candidatus Amesbacteria bacterium GW2011_GWA1_47_16	1618353	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.899933	47.3	-	LCNV01	51	1013	1013	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319918	GCA_001001005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/005/GCA_001001005.1_ASM100100v1	-	-
candidate division Kazan bacterium GW2011_GWA1_44_22	1620410	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.343032	44.5	-	LCIJ01	25	340	335	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319775	GCA_001001025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/025/GCA_001001025.1_ASM100102v1	-	-
Microgenomates group bacterium GW2011_GWC1_44_23	1618523	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.858244	43.7	-	LCIM01	24	966	966	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319778	GCA_001001055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/055/GCA_001001055.1_ASM100105v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWA1_44_23	1618558	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.596129	43.7	-	LCIL01	21	665	664	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319777	GCA_001001045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/045/GCA_001001045.1_ASM100104v1	-	-
Candidatus Yanofskybacteria bacterium GW2011_GWF1_44_227	1619034	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.608108	42.8	-	LCIK01	17	669	668	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319776	GCA_001001065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/065/GCA_001001065.1_ASM100106v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWD2_45_10	1618398	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.10181	44.1	-	LCKB01	30	1174	1174	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319819	GCA_001001125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/125/GCA_001001125.1_ASM100112v1	-	-
Candidatus Wolfebacteria bacterium GW2011_GWA1_44_24	1619002	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.457184	41.8	-	LCIO01	3	474	472	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319780	GCA_001001115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/115/GCA_001001115.1_ASM100111v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWC2_45_10	1618700	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.743098	45.4	-	LCKA01	49	813	811	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319818	GCA_001001155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/155/GCA_001001155.1_ASM100115v1	-	-
Candidatus Giovannonibacteria bacterium GW2011_GWB1_44_23	1618652	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.890899	43.9	-	LCIN01	24	947	947	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319779	GCA_001001105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/105/GCA_001001105.1_ASM100110v1	-	-
Parcubacteria group bacterium GW2011_GWB1_45_10	1618877	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.495887	45.3	-	LCKC01	25	524	523	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319820	GCA_001001185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/185/GCA_001001185.1_ASM100118v1	-	-
Candidatus Yanofskybacteria bacterium GW2011_GWB1_45_11	1619026	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.439328	44.6	-	LCKD01	15	476	473	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319821	GCA_001001195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/195/GCA_001001195.1_ASM100119v1	-	-
Parcubacteria group bacterium GW2011_GWF2_45_11	1618973	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.13568	45.3	-	LCKE01	69	1123	1121	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319822	GCA_001001205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/205/GCA_001001205.1_ASM100120v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWD1_47_21	1618594	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.319665	46.9	-	LCOD01	31	385	385	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319926	GCA_001001215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/215/GCA_001001215.1_ASM100121v1	-	-
Candidatus Jorgensenbacteria bacterium GW2011_GWA2_45_13	1618662	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.56805	45.2	-	LCKF01	45	658	657	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319823	GCA_001001265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/265/GCA_001001265.1_ASM100126v1	-	-
Parcubacteria group bacterium GW2011_GWC1_45_13	1618914	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.755799	44.1	-	LCKG01	28	816	815	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319824	GCA_001001285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/285/GCA_001001285.1_ASM100128v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWC2_47_16	1618590	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.541226	46.4	-	LCNW01	43	631	630	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319919	GCA_001001295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/295/GCA_001001295.1_ASM100129v1	-	-
Parcubacteria group bacterium GW2011_GWA2_45_14	1618832	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.28816	45.4	-	LCKH01	21	1230	1230	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319825	GCA_001001305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/305/GCA_001001305.1_ASM100130v1	-	-
Parcubacteria group bacterium GW2011_GWC1_45_14	1618915	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.888454	45.3	-	LCKI01	32	955	955	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319826	GCA_001001345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/345/GCA_001001345.1_ASM100134v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWA1_45_15	1618377	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.856977	43.8	-	LCKJ01	22	963	963	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319827	GCA_001001365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/365/GCA_001001365.1_ASM100136v1	-	-
Parcubacteria group bacterium GW2011_GWC2_45_15	1618931	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.850953	45.4	-	LCKL01	52	840	840	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319829	GCA_001001425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/425/GCA_001001425.1_ASM100142v1	-	-
Candidatus Amesbacteria bacterium GW2011_GWC1_47_15	1618364	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.914308	47.2	-	LCNU01	52	1033	1026	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319917	GCA_001001375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/375/GCA_001001375.1_ASM100137v1	-	-
Parcubacteria group bacterium GW2011_GWA2_45_15	1618833	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.403279	44.9	-	LCKK01	36	469	469	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319828	GCA_001001385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/385/GCA_001001385.1_ASM100138v1	-	-
Microgenomates group bacterium GW2011_GWB1_45_17	1618506	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.94837	45.3	-	LCKN01	21	1049	1043	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319831	GCA_001001445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/445/GCA_001001445.1_ASM100144v1	-	-
Candidatus Amesbacteria bacterium GW2011_GWA2_47_11b	1618358	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.758139	46.6	-	LCNO01	35	936	935	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319911	GCA_001001455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/455/GCA_001001455.1_ASM100145v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWC1_45_18	1618696	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.15189	44	-	LCKP01	10	1151	1149	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319833	GCA_001001525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/525/GCA_001001525.1_ASM100152v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWB2_45_17	1618388	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.894216	43.8	-	LCKO01	19	1011	1011	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319832	GCA_001001485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/485/GCA_001001485.1_ASM100148v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWC2_45_15	1618394	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.616301	44.6	-	LCKM01	60	715	715	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319830	GCA_001001475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/475/GCA_001001475.1_ASM100147v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWE1_45_18	1618598	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.599666	45.9	-	LCKQ01	46	687	682	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319834	GCA_001001545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/545/GCA_001001545.1_ASM100154v1	-	-
Microgenomates group bacterium GW2011_GWF2_45_18	1618539	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.977514	43.4	-	LCKR01	11	956	956	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319835	GCA_001001575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/575/GCA_001001575.1_ASM100157v1	-	-
Candidatus Giovannonibacteria bacterium GW2011_GWA2_45_21	1618649	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.574022	45.2	-	LCKT01	54	676	676	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319837	GCA_001001585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/585/GCA_001001585.1_ASM100158v1	-	-
Candidatus Amesbacteria bacterium GW2011_GWC2_45_19	1618366	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.813806	46.1	-	LCKS01	21	918	918	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319836	GCA_001001555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/555/GCA_001001555.1_ASM100155v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWB1_45_35	1618385	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.803568	43.7	-	LCKV01	29	905	905	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319839	GCA_001001635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/635/GCA_001001635.1_ASM100163v1	-	-
Candidatus Magasanikbacteria bacterium GW2011_GWA2_45_39	1619041	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.874653	45.2	-	LCKX01	41	869	869	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319841	GCA_001001655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/655/GCA_001001655.1_ASM100165v1	-	-
Parcubacteria group bacterium GW2011_GWA2_45_30	1618834	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.759973	45.1	-	LCKU01	56	769	769	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319838	GCA_001001625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/625/GCA_001001625.1_ASM100162v1	-	-
Candidatus Uhrbacteria bacterium GW2011_GWE2_45_35	1618993	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.02404	45	-	LCKW01	69	1016	1014	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319840	GCA_001001645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/645/GCA_001001645.1_ASM100164v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWC1_45_47	1618389	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.324218	44.9	-	LCKZ01	35	388	387	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319843	GCA_001001725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/725/GCA_001001725.1_ASM100172v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWC2_45_40	1618395	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.796582	43.8	-	LCKY01	35	926	926	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319842	GCA_001001715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/715/GCA_001001715.1_ASM100171v1	-	-
Parcubacteria group bacterium GW2011_GWA2_47_26	1618844	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.842361	46.5	-	LCOG01	26	806	804	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319929	GCA_001001705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/705/GCA_001001705.1_ASM100170v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWB1_45_5	1618581	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.610072	45.4	-	LCLA01	55	755	755	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319844	GCA_001001755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/755/GCA_001001755.1_ASM100175v1	-	-
Parcubacteria group bacterium GW2011_GWA1_45_7	1618790	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.427118	45.4	-	LCLC01	44	498	496	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319846	GCA_001001785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/785/GCA_001001785.1_ASM100178v1	-	-
Parcubacteria group bacterium GW2011_GWB1_45_7	1618878	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.325525	45.1	-	LCLD01	25	359	359	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319847	GCA_001001805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/805/GCA_001001805.1_ASM100180v1	-	-
Parcubacteria group bacterium GW2011_GWF1_45_5	1618958	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.657337	45.6	-	LCLB01	51	727	723	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319845	GCA_001001795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/795/GCA_001001795.1_ASM100179v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWA1_45_8	1618559	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.200897	44.6	-	LCLG01	10	235	235	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319850	GCA_001001865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/865/GCA_001001865.1_ASM100186v1	-	-
Parcubacteria group bacterium GW2011_GWC2_45_7	1618932	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.778802	45.4	-	LCLE01	82	871	871	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319848	GCA_001001845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/845/GCA_001001845.1_ASM100184v1	-	-
Candidatus Beckwithbacteria bacterium GW2011_GWA2_47_25	1618370	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.14798	48.6	-	LCOF01	19	1241	1240	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319928	GCA_001001885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/885/GCA_001001885.1_ASM100188v1	-	-
Candidatus Azambacteria bacterium GW2011_GWC2_45_7b	1618621	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.423355	44.6	-	LCLF01	41	491	490	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319849	GCA_001001895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/895/GCA_001001895.1_ASM100189v1	-	-
Candidatus Beckwithbacteria bacterium GW2011_GWB1_47_15	1618371	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.08566	48.7	-	LCNT01	11	1148	1146	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319916	GCA_001001955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/955/GCA_001001955.1_ASM100195v1	-	-
Candidatus Magasanikbacteria bacterium GW2011_GWC2_45_8	1619050	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.723952	45	-	LCLH01	50	712	711	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319851	GCA_001001925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/925/GCA_001001925.1_ASM100192v1	-	-
Parcubacteria group bacterium GW2011_GWA2_47_12	1618841	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.648285	46.8	-	LCNP01	44	770	770	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319912	GCA_001001935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/935/GCA_001001935.1_ASM100193v1	-	-
Microgenomates group bacterium GW2011_GWC2_45_8	1618531	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.481252	45.3	-	LCLI01	52	575	575	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319852	GCA_001001985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/001/985/GCA_001001985.1_ASM100198v1	-	-
Candidatus Jorgensenbacteria bacterium GW2011_GWA2_45_9	1618663	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.542483	45.1	-	LCLJ01	30	579	577	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319853	GCA_001002015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/015/GCA_001002015.1_ASM100201v1	-	-
Candidatus Giovannonibacteria bacterium GW2011_GWB1_45_9b	1618653	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.377361	44.4	-	LCLL01	33	411	410	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319855	GCA_001002025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/025/GCA_001002025.1_ASM100202v1	-	-
Parcubacteria group bacterium GW2011_GWB1_45_9	1618879	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.599556	44.8	-	LCLK01	18	622	622	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319854	GCA_001002005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/005/GCA_001002005.1_ASM100200v1	-	-
Microgenomates group bacterium GW2011_GWC1_47_20	1618529	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.811688	46.3	-	LCOB01	13	922	922	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319924	GCA_001002035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/035/GCA_001002035.1_ASM100203v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWC2_45_9	1618589	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.591473	44.3	-	LCLM01	54	702	702	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319856	GCA_001002085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/085/GCA_001002085.1_ASM100208v1	-	-
Parcubacteria group bacterium GW2011_GWC1_45_9	1618916	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.56023	45.1	-	LCLN01	39	616	615	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319857	GCA_001002095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/095/GCA_001002095.1_ASM100209v1	-	-
Candidatus Azambacteria bacterium GW2011_GWA2_45_90	1618614	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.473723	46.1	-	LCLO01	45	492	491	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319858	GCA_001002125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/125/GCA_001002125.1_ASM100212v1	-	-
Candidatus Pacebacteria bacterium GW2011_GWA1_46_10	1618469	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.919891	46.6	-	LCLP01	9	924	922	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319859	GCA_001002135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/135/GCA_001002135.1_ASM100213v1	-	-
Parcubacteria group bacterium GW2011_GWA2_46_10	1618835	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.507511	46.1	-	LCLQ01	21	603	603	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319860	GCA_001002165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/165/GCA_001002165.1_ASM100216v1	-	-
Candidatus Saccharibacteria bacterium GW2011_GWA2_46_10	1619069	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.735804	46.6	-	LCLR01	25	747	747	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319861	GCA_001002185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/185/GCA_001002185.1_ASM100218v1	-	-
Microgenomates group bacterium GW2011_GWF1_46_12	1618538	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.677888	46.5	-	LCLT01	32	754	753	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319863	GCA_001002205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/205/GCA_001002205.1_ASM100220v1	-	-
Candidatus Nomurabacteria bacterium GW2011_GWA1_46_11	1618732	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.874331	46.3	-	LCLS01	47	981	975	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319862	GCA_001002215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/215/GCA_001002215.1_ASM100221v1	-	-
Candidatus Azambacteria bacterium GW2011_GWC1_46_13	1618619	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.658356	46.3	-	LCLU01	47	650	648	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319864	GCA_001002245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/245/GCA_001002245.1_ASM100224v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWF1_46_13	1618602	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.543477	46.8	-	LCLV01	38	624	620	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319865	GCA_001002255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/255/GCA_001002255.1_ASM100225v1	-	-
Microgenomates group bacterium GW2011_GWC1_46_15	1618526	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.913836	45.4	-	LCLX01	8	986	986	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319867	GCA_001002285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/285/GCA_001002285.1_ASM100228v1	-	-
Microgenomates group bacterium GW2011_GWA1_46_15	1618494	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.824487	45.7	-	LCLW01	20	911	911	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319866	GCA_001002295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/295/GCA_001002295.1_ASM100229v1	-	-
Candidatus Amesbacteria bacterium GW2011_GWB1_47_19	1618360	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.998151	47	-	LCNZ01	15	1068	1061	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319922	GCA_001002325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/325/GCA_001002325.1_ASM100232v1	-	-
Microgenomates group bacterium GW2011_GWC1_46_16	1618527	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.735413	46.4	-	LCLZ01	35	784	779	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319869	GCA_001002345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/345/GCA_001002345.1_ASM100234v1	-	-
Candidatus Magasanikbacteria bacterium GW2011_GWA2_46_17	1619042	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.668211	46.3	-	LCMA01	32	592	592	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319870	GCA_001002365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/365/GCA_001002365.1_ASM100236v1	-	-
Microgenomates group bacterium GW2011_GWA2_46_16	1618501	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.630562	45.7	-	LCLY01	31	722	720	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319868	GCA_001002355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/355/GCA_001002355.1_ASM100235v1	-	-
Microgenomates group bacterium GW2011_GWF2_46_18	1618540	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.674048	46.5	-	LCMB01	24	737	735	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319871	GCA_001002415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/415/GCA_001002415.1_ASM100241v1	-	-
Candidatus Amesbacteria bacterium GW2011_GWA1_47_20	1618354	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.692671	46.8	-	LCOA01	37	845	845	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319923	GCA_001002405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/405/GCA_001002405.1_ASM100240v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWE1_46_18	1618399	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.60823	43.7	-	LCMC01	57	717	714	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319872	GCA_001002445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/445/GCA_001002445.1_ASM100244v1	-	-
Microgenomates group bacterium GW2011_GWC1_46_20	1618528	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.733713	46.5	-	LCMD01	31	904	903	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319873	GCA_001002455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/455/GCA_001002455.1_ASM100245v1	-	-
Candidatus Azambacteria bacterium GW2011_GWB1_46_27	1618617	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.633393	45.9	-	LCMJ01	61	676	674	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319879	GCA_001002515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/515/GCA_001002515.1_ASM100251v1	-	-
candidate division WWE3 bacterium GW2011_GWA1_46_21	1619107	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.432578	46.1	-	LCMF01	33	493	492	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319875	GCA_001002495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/495/GCA_001002495.1_ASM100249v1	-	-
Candidatus Giovannonibacteria bacterium GW2011_GWB1_46_20	1618654	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.699982	44.9	-	LCME01	28	766	766	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319874	GCA_001002485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/485/GCA_001002485.1_ASM100248v1	-	-
Candidatus Amesbacteria bacterium GW2011_GWC1_46_24	1618363	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.00916	46.8	-	LCMH01	16	1079	1072	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319877	GCA_001002525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/525/GCA_001002525.1_ASM100252v1	-	-
Candidatus Uhrbacteria bacterium GW2011_GWF2_46_218	1619001	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.06132	45.8	-	LCMG01	44	1027	1025	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319876	GCA_001002565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/565/GCA_001002565.1_ASM100256v1	-	-
Candidatus Wolfebacteria bacterium GW2011_GWC2_46_275	1619014	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.887803	46.7	-	LCMK01	52	949	948	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319880	GCA_001002585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/585/GCA_001002585.1_ASM100258v1	-	-
Candidatus Beckwithbacteria bacterium GW2011_GWA1_46_30	1618368	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.08633	48.5	-	LCML01	21	1173	1171	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319881	GCA_001002615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/615/GCA_001002615.1_ASM100261v1	-	-
Candidatus Collierbacteria bacterium GW2011_GWA2_46_26	1618381	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.09564	45	-	LCMI01	17	1176	1173	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319878	GCA_001002605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/605/GCA_001002605.1_ASM100260v1	-	-
Candidatus Azambacteria bacterium GW2011_GWF2_46_32	1618628	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.61393	46.1	-	LCMM01	53	662	661	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319882	GCA_001002645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/645/GCA_001002645.1_ASM100264v1	-	-
Candidatus Amesbacteria bacterium GW2011_GWA1_46_35	1618352	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.749932	45.9	-	LCMN01	39	878	878	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319883	GCA_001002655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/655/GCA_001002655.1_ASM100265v1	-	-
Candidatus Azambacteria bacterium GW2011_GWB2_46_37	1618618	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.747851	46.1	-	LCMO01	53	762	760	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319884	GCA_001002685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/685/GCA_001002685.1_ASM100268v1	-	-
Parcubacteria group bacterium GW2011_GWA2_46_39	1618836	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.335613	45.9	-	LCMP01	32	345	345	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319885	GCA_001002705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/705/GCA_001002705.1_ASM100270v1	-	-
Candidatus Azambacteria bacterium GW2011_GWE2_46_45	1618625	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.54937	46	-	LCMQ01	53	583	581	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319886	GCA_001002725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/725/GCA_001002725.1_ASM100272v1	-	-
Candidatus Azambacteria bacterium GW2011_GWD2_46_48	1618623	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.572759	46.1	-	LCMR01	54	612	610	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319887	GCA_001002715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/715/GCA_001002715.1_ASM100271v1	-	-
Candidatus Uhrbacteria bacterium GW2011_GWE2_46_68	1618994	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.0556	45.9	-	LCMS01	30	1015	1013	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319888	GCA_001002765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/765/GCA_001002765.1_ASM100276v1	-	-
Candidatus Wolfebacteria bacterium GW2011_GWB2_46_69	1619009	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.972143	46.7	-	LCMT01	13	1010	1008	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319889	GCA_001002795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/795/GCA_001002795.1_ASM100279v1	-	-
Microgenomates group bacterium GW2011_GWA1_46_7	1618495	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.648697	46.5	-	LCMU01	46	747	747	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319890	GCA_001002785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/785/GCA_001002785.1_ASM100278v1	-	-
Microgenomates group bacterium GW2011_GWA2_46_7	1618502	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.56106	45.9	-	LCMX01	63	671	671	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319893	GCA_001002845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/845/GCA_001002845.1_ASM100284v1	-	-
Parcubacteria group bacterium GW2011_GWA2_46_7	1618837	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.398824	46.1	-	LCMW01	32	460	459	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319892	GCA_001002825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/825/GCA_001002825.1_ASM100282v1	-	-
Berkelbacteria bacterium GW2011_GWA2_46_7	1618335	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.408073	45.6	-	LCMV01	44	463	460	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319891	GCA_001002835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/835/GCA_001002835.1_ASM100283v1	-	-
Microgenomates group bacterium GW2011_GWC2_46_7	1618532	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.400128	45.5	-	LCMZ01	50	496	496	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319895	GCA_001002895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/895/GCA_001002895.1_ASM100289v1	-	-
Microgenomates group bacterium GW2011_GWB1_46_7	1618507	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.711732	46.5	-	LCMY01	34	780	780	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319894	GCA_001002885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/885/GCA_001002885.1_ASM100288v1	-	-
Parcubacteria group bacterium GW2011_GWB1_46_8	1618880	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.444963	46	-	LCNA01	17	493	492	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319896	GCA_001002925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/925/GCA_001002925.1_ASM100292v1	-	-
Candidatus Woesebacteria bacterium GW2011_GWF2_46_8	1618604	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.494025	46	-	LCNC01	55	590	587	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319898	GCA_001002935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/935/GCA_001002935.1_ASM100293v1	-	-
Parcubacteria group bacterium GW2011_GWA2_46_9	1618838	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.07419	45.8	-	LCND01	46	1036	1036	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319899	GCA_001002965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/965/GCA_001002965.1_ASM100296v1	-	-
Parcubacteria group bacterium GW2011_GWA1_47_10	1618791	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.735041	47.5	-	LCNF01	18	837	837	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319902	GCA_001003005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/005/GCA_001003005.1_ASM100300v1	-	-
Parcubacteria group bacterium GW2011_GWF2_46_8	1618974	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.459408	45.8	-	LCNB01	33	508	508	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319897	GCA_001002975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/975/GCA_001002975.1_ASM100297v1	-	-
candidate division WWE3 bacterium GW2011_GWA2_46_9	1619111	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.325777	45.7	-	LCNE01	22	359	359	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319900	GCA_001002985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/002/985/GCA_001002985.1_ASM100298v1	-	-
Parcubacteria group bacterium GW2011_GWA2_47_10	1618839	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.33063	46.7	-	LCNG01	55	1448	1441	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319903	GCA_001003045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/045/GCA_001003045.1_ASM100304v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWE2_47_10	1618714	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.918381	47.1	-	LCNJ01	63	1032	1031	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319906	GCA_001003065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/065/GCA_001003065.1_ASM100306v1	-	-
candidate division WWE3 bacterium GW2011_GWC1_47_10	1619122	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.488761	46.3	-	LCNH01	35	538	538	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319904	GCA_001003075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/075/GCA_001003075.1_ASM100307v1	-	-
Parcubacteria group bacterium GW2011_GWA2_47_10b	1618840	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.810933	47.1	-	LCNI01	45	880	878	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319905	GCA_001003085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/085/GCA_001003085.1_ASM100308v1	-	-
Candidatus Wolfebacteria bacterium GW2011_GWC1_47_103	1619012	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.96611	46.7	-	LCNK01	22	1011	1009	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319907	GCA_001003095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/095/GCA_001003095.1_ASM100309v1	-	-
Candidatus Amesbacteria bacterium GW2011_GWA2_47_11	1618357	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.883773	47.5	-	LCNM01	33	1008	1008	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319909	GCA_001003155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/155/GCA_001003155.1_ASM100315v1	-	-
Parcubacteria group bacterium GW2011_GWA1_47_11	1618792	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.684796	50.3	-	LCNL01	43	696	696	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319908	GCA_001003145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/145/GCA_001003145.1_ASM100314v1	-	-
Parcubacteria group bacterium GW2011_GWA2_47_16	1618842	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.826033	46.4	-	LCNX01	30	892	892	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319920	GCA_001003165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/165/GCA_001003165.1_ASM100316v1	-	-
Parcubacteria group bacterium GW2011_GWA2_47_8b	1618848	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.451387	47.4	-	LCOU01	45	535	530	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319943	GCA_001003205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/205/GCA_001003205.1_ASM100320v1	-	-
Parcubacteria group bacterium GW2011_GWA2_47_9	1618849	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.773986	47.2	-	LCOX01	45	819	815	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319946	GCA_001003225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/225/GCA_001003225.1_ASM100322v1	-	-
Parcubacteria group bacterium GW2011_GWA1_47_9	1618794	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.568117	46.9	-	LCOW01	40	607	607	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319945	GCA_001003255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/255/GCA_001003255.1_ASM100325v1	-	-
Candidatus Amesbacteria bacterium GW2011_GWC2_47_8	1618367	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.661848	46.5	-	LCOT01	51	822	822	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319942	GCA_001003245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/245/GCA_001003245.1_ASM100324v1	-	-
Candidatus Pacebacteria bacterium GW2011_GWB1_47_8	1618470	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.584168	46.6	-	LCOV01	2	597	596	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319944	GCA_001003265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/265/GCA_001003265.1_ASM100326v1	-	-
Microgenomates group bacterium GW2011_GWA2_47_8	1618503	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.718397	47.1	-	LCOS01	61	782	782	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319941	GCA_001003305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/305/GCA_001003305.1_ASM100330v1	-	-
Candidatus Beckwithbacteria bacterium GW2011_GWC2_47_9	1618373	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.357038	47.3	-	LCOZ01	44	402	402	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319948	GCA_001003335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/335/GCA_001003335.1_ASM100333v1	-	-
Parcubacteria group bacterium GW2011_GWA2_47_8	1618847	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.645285	47.2	-	LCOR01	55	750	738	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319940	GCA_001003325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/325/GCA_001003325.1_ASM100332v1	-	-
Candidatus Gottesmanbacteria bacterium GW2011_GWA2_47_9	1618445	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.14179	46.9	-	LCOY01	76	1276	1273	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319947	GCA_001003345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/345/GCA_001003345.1_ASM100334v1	-	-
Microgenomates group bacterium GW2011_GWF2_47_9	1618541	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.709943	47	-	LCPA01	50	780	780	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319949	GCA_001003385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/385/GCA_001003385.1_ASM100338v1	-	-
Candidatus Yanofskybacteria bacterium GW2011_GWA1_48_10	1619022	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.309527	47.6	-	LCPC01	19	328	328	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319951	GCA_001003405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/405/GCA_001003405.1_ASM100340v1	-	-
Microgenomates group bacterium GW2011_GWA1_48_10	1618496	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.958668	47.4	-	LCPD01	33	1016	1016	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319952	GCA_001003415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/415/GCA_001003415.1_ASM100341v1	-	-
Candidatus Wolfebacteria bacterium GW2011_GWA2_47_9b	1619005	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.01531	46.7	-	LCPB01	32	1072	1070	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319950	GCA_001003425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/425/GCA_001003425.1_ASM100342v1	-	-
Candidatus Amesbacteria bacterium GW2011_GWC1_48_10	1618365	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.85905	47.8	-	LCPE01	55	989	986	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319953	GCA_001003465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/465/GCA_001003465.1_ASM100346v1	-	-
Candidatus Jorgensenbacteria bacterium GW2011_GWA1_48_11	1618660	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.691147	49	-	LCPF01	8	741	739	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319954	GCA_001003475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/475/GCA_001003475.1_ASM100347v1	-	-
Parcubacteria group bacterium GW2011_GWA1_48_11b	1618795	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.585462	47.8	-	LCPG01	44	648	647	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319955	GCA_001003515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/515/GCA_001003515.1_ASM100351v1	-	-
Candidatus Yanofskybacteria bacterium GW2011_GWC1_48_11	1619027	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.700053	49.3	-	LCPH01	11	762	758	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319956	GCA_001003505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/505/GCA_001003505.1_ASM100350v1	-	-
Candidatus Jorgensenbacteria bacterium GW2011_GWA1_48_13	1618661	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.56955	48.7	-	LCPI01	5	627	624	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319957	GCA_001003525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/525/GCA_001003525.1_ASM100352v1	-	-
Candidatus Amesbacteria bacterium GW2011_GWB1_48_13	1618362	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.933366	47.8	-	LCPK01	57	1068	1067	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319959	GCA_001003585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/585/GCA_001003585.1_ASM100358v1	-	-
Candidatus Gottesmanbacteria bacterium GW2011_GWA1_48_13	1618439	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.553412	47.8	-	LCPJ01	32	616	616	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319958	GCA_001003565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/565/GCA_001003565.1_ASM100356v1	-	-
Parcubacteria group bacterium GW2011_GWC2_48_17	1618933	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.02722	47.8	-	LCPL01	29	1057	1048	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319960	GCA_001003605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/605/GCA_001003605.1_ASM100360v1	-	-
Parcubacteria group bacterium GW2011_GWB1_48_6	1618881	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.215053	47.8	-	LCPM01	16	242	242	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319961	GCA_001003625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/625/GCA_001003625.1_ASM100362v1	-	-
Candidatus Wolfebacteria bacterium GW2011_GWE1_48_7	1619016	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.738926	47.3	-	LCPN01	77	826	825	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319962	GCA_001003645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/645/GCA_001003645.1_ASM100364v1	-	-
Candidatus Amesbacteria bacterium GW2011_GWA1_48_9	1618355	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.8907	47.7	-	LCPP01	48	1038	1038	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319964	GCA_001003675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/675/GCA_001003675.1_ASM100367v1	-	-
Candidatus Jorgensenbacteria bacterium GW2011_GWC1_48_8	1618666	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.535634	48.5	-	LCPO01	39	632	630	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319963	GCA_001003655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/655/GCA_001003655.1_ASM100365v1	-	-
Parcubacteria group bacterium GW2011_GWA2_48_9	1618850	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.25975	48.1	-	LCPQ01	44	1283	1281	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319965	GCA_001003705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/705/GCA_001003705.1_ASM100370v1	-	-
Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9	1619071	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.06768	47.6	-	LCPR01	39	1172	1172	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319966	GCA_001003725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/725/GCA_001003725.1_ASM100372v1	-	-
Parcubacteria group bacterium GW2011_GWA1_49_11	1618796	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.291005	49.4	-	LCPS01	25	326	326	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319967	GCA_001003745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/745/GCA_001003745.1_ASM100374v1	-	-
Parcubacteria group bacterium GW2011_GWB1_49_12	1618882	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.673821	49.5	-	LCPU01	7	710	710	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319969	GCA_001003785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/785/GCA_001003785.1_ASM100378v1	-	-
Candidatus Beckwithbacteria bacterium GW2011_GWC2_49_11	1618374	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.959638	49.1	-	LCPT01	15	1060	1059	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319968	GCA_001003755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/755/GCA_001003755.1_ASM100375v1	-	-
candidate division CPR1 bacterium GW2011_GWC1_49_13	1618342	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.541715	50.2	-	LCPW01	26	606	606	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319971	GCA_001003815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/815/GCA_001003815.1_ASM100381v1	-	-
Candidatus Kaiserbacteria bacterium GW2011_GWC2_49_12	1618675	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.621941	50.1	-	LCPV01	69	691	690	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319970	GCA_001003805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/805/GCA_001003805.1_ASM100380v1	-	-
Candidatus Kaiserbacteria bacterium GW2011_GWA2_49_19	1618669	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.575392	48.8	-	LCPZ01	23	582	581	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319975	GCA_001003845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/845/GCA_001003845.1_ASM100384v1	-	-
Parcubacteria group bacterium GW2011_GWA2_49_16	1618851	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.591886	48.3	-	LCPY01	37	615	615	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319973	GCA_001003885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/885/GCA_001003885.1_ASM100388v1	-	-
Candidatus Moranbacteria bacterium GW2011_GWE1_49_15	1618710	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.871566	47.3	-	LCPX01	58	934	932	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319972	GCA_001003855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/855/GCA_001003855.1_ASM100385v1	-	-
Parcubacteria group bacterium GW2011_GWA1_49_26	1618797	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.669716	49.5	-	LCQA01	12	717	716	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319976	GCA_001003905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/905/GCA_001003905.1_ASM100390v1	-	-
Parcubacteria group bacterium GW2011_GWB1_49_7	1618883	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.393832	48.5	-	LCQC01	17	442	442	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319978	GCA_001003935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/935/GCA_001003935.1_ASM100393v1	-	-
Microgenomates group bacterium GW2011_GWC1_49_7	1618530	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.391764	49.3	-	LCQE01	43	468	468	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319980	GCA_001003975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/975/GCA_001003975.1_ASM100397v1	-	-
Candidatus Kaiserbacteria bacterium GW2011_GWA2_49_56	1618670	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.129371	49.4	-	LCQB01	13	130	130	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319977	GCA_001003925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/925/GCA_001003925.1_ASM100392v1	-	-
Candidatus Gottesmanbacteria bacterium GW2011_GWB1_49_7	1618448	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.803024	49.6	-	LCQD01	57	1156	1156	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319979	GCA_001003965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/003/965/GCA_001003965.1_ASM100396v1	-	-
Parcubacteria group bacterium GW2011_GWA2_49_9	1618852	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.909954	49	-	LCQF01	44	983	983	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319981	GCA_001004005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/005/GCA_001004005.1_ASM100400v1	-	-
Candidatus Jorgensenbacteria bacterium GW2011_GWB1_49_9	1618664	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.757718	49.2	-	LCQG01	7	801	799	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319982	GCA_001004035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/035/GCA_001004035.1_ASM100403v1	-	-
Parcubacteria group bacterium GW2011_GWC2_49_9	1618934	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.28839	48.3	-	LCQH01	51	1291	1288	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319983	GCA_001004025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/025/GCA_001004025.1_ASM100402v1	-	-
Parcubacteria group bacterium GW2011_GWA2_50_10	1618853	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.660836	49.5	-	LCQI01	18	722	721	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319984	GCA_001004055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/055/GCA_001004055.1_ASM100405v1	-	-
Parcubacteria group bacterium GW2011_GWA2_50_10b	1618854	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.384075	50.8	-	LCQJ01	31	439	439	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319985	GCA_001004085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/085/GCA_001004085.1_ASM100408v1	-	-
Parcubacteria group bacterium GW2011_GWA1_50_14	1618798	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.409872	50	-	LCQL01	29	438	433	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319987	GCA_001004115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/115/GCA_001004115.1_ASM100411v1	-	-
Candidatus Jorgensenbacteria bacterium GW2011_GWB1_50_10	1618665	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.675076	48.8	-	LCQK01	10	741	738	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319986	GCA_001004105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/105/GCA_001004105.1_ASM100410v1	-	-
Candidatus Kaiserbacteria bacterium GW2011_GWB1_50_17	1618673	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.434269	50	-	LCQM01	43	478	478	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319989	GCA_001004125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/125/GCA_001004125.1_ASM100412v1	-	-
Candidatus Magasanikbacteria bacterium GW2011_GWA2_50_22	1619043	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.324145	49.8	-	LCQN01	18	312	312	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319990	GCA_001004165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/165/GCA_001004165.1_ASM100416v1	-	-
Candidatus Kaiserbacteria bacterium GW2011_GWA1_50_28	1618668	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.421273	50	-	LCQO01	42	466	460	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319991	GCA_001004185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/185/GCA_001004185.1_ASM100418v1	-	-
Candidatus Adlerbacteria bacterium GW2011_GWC1_50_9	1618608	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.830557	49.9	-	LCQQ01	89	911	910	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319993	GCA_001004205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/205/GCA_001004205.1_ASM100420v1	-	-
Parcubacteria group bacterium GW2011_GWB1_50_9	1618884	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.54293	50.2	-	LCQP01	35	578	578	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319992	GCA_001004195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/195/GCA_001004195.1_ASM100419v1	-	-
Parcubacteria group bacterium GW2011_GWF2_50_9	1618975	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.11593	49.9	-	LCQR01	95	1126	1121	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319994	GCA_001004225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/225/GCA_001004225.1_ASM100422v1	-	-
Parcubacteria group bacterium GW2011_GWA2_51_10	1618855	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.711659	51.6	-	LCQS01	25	797	796	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03319995	GCA_001004265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/265/GCA_001004265.1_ASM100426v1	-	-
Parcubacteria group bacterium GW2011_GWA1_51_12	1618799	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.744758	51.3	-	LCQT01	55	797	797	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319996	GCA_001004285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/285/GCA_001004285.1_ASM100428v1	-	-
Parcubacteria group bacterium GW2011_GWA2_51_12	1618856	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.51458	51.1	-	LCQU01	38	589	589	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319997	GCA_001004295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/295/GCA_001004295.1_ASM100429v1	-	-
Parcubacteria group bacterium GW2011_GWC1_51_35	1618917	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.603276	51.7	-	LCQV01	37	650	649	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319998	GCA_001004305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/305/GCA_001004305.1_ASM100430v1	-	-
candidate division Kazan bacterium GW2011_GWC1_52_13	1620413	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.760397	51.7	-	LCQY01	6	756	752	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03320001	GCA_001004375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/375/GCA_001004375.1_ASM100437v1	-	-
Candidatus Kaiserbacteria bacterium GW2011_GWA2_52_12	1618671	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.924614	52	-	LCQW01	38	974	974	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319999	GCA_001004345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/345/GCA_001004345.1_ASM100434v1	-	-
Parcubacteria group bacterium GW2011_GWF2_52_12	1618976	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.610782	52.1	-	LCQX01	21	674	669	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320000	GCA_001004355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/355/GCA_001004355.1_ASM100435v1	-	-
Parcubacteria group bacterium GW2011_GWF1_52_5	1618959	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.512323	51.8	-	LCQZ01	41	593	593	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320002	GCA_001004405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/405/GCA_001004405.1_ASM100440v1	-	-
Candidatus Kaiserbacteria bacterium GW2011_GWB1_52_6	1618674	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.648724	52.2	-	LCRA01	36	705	705	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320003	GCA_001004425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/425/GCA_001004425.1_ASM100442v1	-	-
candidate division Kazan bacterium GW2011_GWB1_52_7	1620414	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.711474	51.8	-	LCRB01	17	728	723	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320004	GCA_001004445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/445/GCA_001004445.1_ASM100444v1	-	-
Parcubacteria group bacterium GW2011_GWB1_52_7	1618885	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.701044	51.4	-	LCRC01	45	734	733	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320005	GCA_001004435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/435/GCA_001004435.1_ASM100443v1	-	-
Candidatus Uhrbacteria bacterium GW2011_GWD2_52_7	1618989	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.812404	52.2	-	LCRD01	80	920	920	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320006	GCA_001004485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/485/GCA_001004485.1_ASM100448v1	-	-
Parcubacteria group bacterium GW2011_GWA2_52_8	1618857	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.412373	52.4	-	LCRE01	51	470	470	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320007	GCA_001004505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/505/GCA_001004505.1_ASM100450v1	-	-
Parcubacteria group bacterium GW2011_GWC2_52_8c	1618935	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.469558	51.6	-	LCRG01	45	512	512	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320009	GCA_001004515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/515/GCA_001004515.1_ASM100451v1	-	-
Candidatus Kaiserbacteria bacterium GW2011_GWC2_52_8b	1618676	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.998293	51.7	-	LCRF01	80	1093	1092	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320008	GCA_001004525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/525/GCA_001004525.1_ASM100452v1	-	-
Candidatus Uhrbacteria bacterium GW2011_GWA2_53_10	1618980	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.543691	52.7	-	LCRI01	42	543	542	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320011	GCA_001004565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/565/GCA_001004565.1_ASM100456v1	-	-
Candidatus Uhrbacteria bacterium GW2011_GWA2_52_8d	1618979	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.705709	51.4	-	LCRH01	69	785	785	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320010	GCA_001004575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/575/GCA_001004575.1_ASM100457v1	-	-
Parcubacteria group bacterium GW2011_GWA1_53_13	1618800	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.489579	52.6	-	LCRJ01	50	564	563	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320012	GCA_001004585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/585/GCA_001004585.1_ASM100458v1	-	-
Parcubacteria group bacterium GW2011_GWA2_53_21	1618858	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.537787	53.9	-	LCRK01	21	514	512	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320013	GCA_001004625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/625/GCA_001004625.1_ASM100462v1	-	-
Parcubacteria group bacterium GW2011_GWB1_53_43	1618886	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.463564	53.4	-	LCRL01	39	525	521	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03320014	GCA_001004645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/645/GCA_001004645.1_ASM100464v1	-	-
Candidatus Giovannonibacteria bacterium GW2011_GWA2_53_7	1618650	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.677628	51.9	-	LCRM01	82	707	707	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320015	GCA_001004655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/655/GCA_001004655.1_ASM100465v1	-	-
Candidatus Adlerbacteria bacterium GW2011_GWA1_54_10	1618605	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.596207	53.7	-	LCRO01	18	649	648	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320017	GCA_001004665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/665/GCA_001004665.1_ASM100466v1	-	-
Candidatus Uhrbacteria bacterium GW2011_GWC2_53_7	1618986	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.527024	53.5	-	LCRN01	68	628	627	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320016	GCA_001004695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/695/GCA_001004695.1_ASM100469v1	-	-
Candidatus Adlerbacteria bacterium GW2011_GWA2_54_12	1618606	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.256641	53.6	-	LCRP01	1	278	275	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320018	GCA_001004725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/725/GCA_001004725.1_ASM100472v1	-	-
Candidatus Peribacteria bacterium GW2011_GWB1_54_5	1619060	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.02673	53.8	-	LCRQ01	86	1080	1076	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320019	GCA_001004735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/735/GCA_001004735.1_ASM100473v1	-	-
Candidatus Adlerbacteria bacterium GW2011_GWB1_54_7	1618607	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.605084	53.8	-	LCRR01	16	643	641	5/7/15	5/7/15	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03320020	GCA_001004755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/755/GCA_001004755.1_ASM100475v1	-	-
Candidatus Peribacteria bacterium GW2011_GWC2_54_8	1619063	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.22987	54.1	-	LCRS01	97	1242	1238	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320021	GCA_001004775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/775/GCA_001004775.1_ASM100477v1	-	-
Parcubacteria group bacterium GW2011_GWA1_54_88	1618801	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.225482	53.8	-	LCRT01	18	236	236	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320022	GCA_001004805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/805/GCA_001004805.1_ASM100480v1	-	-
Parcubacteria group bacterium GW2011_GWA1_54_9	1618802	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.43629	54.3	-	LCRU01	37	520	520	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320023	GCA_001004815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/815/GCA_001004815.1_ASM100481v1	-	-
Parcubacteria group bacterium GW2011_GWB1_55_9	1618887	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.511987	54.7	-	LCRW01	43	602	602	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320025	GCA_001004855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/855/GCA_001004855.1_ASM100485v1	-	-
Candidatus Peregrinibacteria bacterium GW2011_GWA2_54_9	1619059	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.05649	54.3	-	LCRV01	98	1128	1125	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320024	GCA_001004835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/835/GCA_001004835.1_ASM100483v1	-	-
Candidatus Magasanikbacteria bacterium GW2011_GWA2_56_11	1619044	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.24962	55.5	-	LCRX01	23	1165	1162	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320026	GCA_001004885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/885/GCA_001004885.1_ASM100488v1	-	-
Parcubacteria group bacterium GW2011_GWA1_56_13	1618803	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.70449	56.6	-	LCRY01	7	761	759	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320027	GCA_001004905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/905/GCA_001004905.1_ASM100490v1	-	-
Parcubacteria group bacterium GW2011_GWA2_56_7	1618860	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.343075	55.6	-	LCSA01	39	407	406	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320029	GCA_001004915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/915/GCA_001004915.1_ASM100491v1	-	-
Parcubacteria group bacterium GW2011_GWA2_56_21	1618859	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.372495	56.3	-	LCRZ01	44	423	422	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320028	GCA_001004925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/925/GCA_001004925.1_ASM100492v1	-	-
Parcubacteria group bacterium GW2011_GWB1_56_8	1618888	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.754948	56.2	-	LCSB01	39	898	898	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320030	GCA_001004965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/965/GCA_001004965.1_ASM100496v1	-	-
Parcubacteria group bacterium GW2011_GWA1_60_11	1618805	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.213517	59.9	-	LCSF01	14	238	237	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320034	GCA_001004995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/995/GCA_001004995.1_ASM100499v1	-	-
Candidatus Kaiserbacteria bacterium GW2011_GWA2_58_9	1618672	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.567894	57.9	-	LCSD01	48	656	655	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320032	GCA_001004985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/004/985/GCA_001004985.1_ASM100498v1	-	-
Parcubacteria group bacterium GW2011_GWB1_57_6	1618889	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.674237	56.6	-	LCSC01	28	748	746	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320031	GCA_001005015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/015/GCA_001005015.1_ASM100501v1	-	-
Parcubacteria group bacterium GW2011_GWA1_59_11	1618804	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.66136	58.9	-	LCSE01	42	756	754	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03320033	GCA_001005035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/035/GCA_001005035.1_ASM100503v1	-	-
Actinokineospora spheciospongiae	909613	PRJNA224112	224112	Terrabacteria group	Actinobacteria	7.52948	72.8	-	AYXG01	263	6572	6286	2/6/14	4/17/17	Contig	University of Wuerzburg	SAMN02382011	GCA_000564855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/855/GCA_000564855.1_ActEG49	24604655	EG49
Rickettsia buchneri	1462938	PRJNA238339	238339	Proteobacteria	Alphaproteobacteria	1.65769	32.5	-	JFKF01	207	1814	1388	5/29/14	4/9/17	Contig	University of Minnesota	SAMN02643344	GCA_000696365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/365/GCA_000696365.1_REISMNv1	25563918	ISO7
Jiangella alkaliphila	419479	PRJEB16466	349390	Terrabacteria group	Actinobacteria	7.7166	72.1	chromosome I:NZ_LT629791.1/LT629791.1	-	1	7075	6851	10/21/16	4/13/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04488563	GCA_900105925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/925/GCA_900105925.1_IMG-taxon_2639762615_annotated_assembly	-	DSM 45079
Arcobacter anaerophilus	877500	PRJNA273926	273926	Proteobacteria	delta/epsilon subdivisions	3.2473	30.2	-	JXXG01	7	3421	3024	2/27/15	4/17/17	Contig	Centre for Geobiology	SAMN03316823	GCA_000935065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/065/GCA_000935065.1_ASM93506v1	26441916	IR-1
Streptomyces ahygroscopicus subsp. wuyiensis	1423886	PRJNA271725	271725	Terrabacteria group	Actinobacteria	9.40469	72.3	-	JXYI02	130	8248	7726	2/27/15	3/11/17	Contig	"Institute of Plant Protection, Chinese Academy of Agricultural Sciences"	SAMN03276531	GCA_000935185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/185/GCA_000935185.2_ASM93518v2	26450721	CK-15
Pseudomonas meliae	86176	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.09797	58.4	-	LJQT01	504	4833	4249	10/20/15	8/8/17	Scaffold	University of Toronto	SAMN03976274	GCA_001400515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/515/GCA_001400515.1_PmlICMP6289	-	ICMP6289
Rhizobium phaseoli	396	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.70484	61.3784	chromosome:NZ_CP013547.1/CP013547.1; plasmid pRetR611a:NZ_CP013548.1/CP013548.1; plasmid pRetR611b:NZ_CP013549.1/CP013549.1; plasmid pRetR611c:NZ_CP013550.1/CP013550.1; plasmid pRetR611d:NZ_CP013551.1/CP013551.1	-	5	6484	6193	6/17/16	4/5/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN03998631	GCA_001664445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/445/GCA_001664445.1_ASM166444v1	-	R611
Skermanella aerolata KACC 11604	1385368	PRJNA214806	214806	Proteobacteria	Alphaproteobacteria	8.52532	64.1	-	AVFK01	276	7924	7584	3/3/15	4/17/17	Contig	State Key Laboratory of Agricultural Microbiology	SAMN03382941	GCA_000936425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/425/GCA_000936425.1_ASM93642v1	-	5416T-32
Agreia bicolorata	110935	PRJNA274891	274891	Terrabacteria group	Actinobacteria	3.92072	65.2	-	JYFC01	20	3717	3616	3/3/15	4/17/17	Contig	Kazan Federal University	SAMN03333328	GCA_000938265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/265/GCA_000938265.1_ASM93826v1	"1,176,094,926,634,750"	VKM Ac-1804
Aeromonas hydrophila	644	PRJNA270887	270887	Proteobacteria	Gammaproteobacteria	4.90139	61.3748	chromosome:NZ_CP010947.1/CP010947.1; plasmid pAH06-06-1:NZ_CP010948.1/CP010948.1; plasmid pAH06-06-2:NZ_CP010949.1/CP010949.1; plasmid pAH06-06-3:NZ_CP010950.1/CP010950.1	-	4	4593	4380	3/4/15	4/3/17	Complete Genome	Mississippi State University	SAMN03366652	GCA_000940915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/915/GCA_000940915.1_ASM94091v1	25908146	AL06-06
Pseudomonas putida	303	PRJDB3359	356538	Proteobacteria	Gammaproteobacteria	7.46769	61.3725	chromosome 1:AP015029.1; plasmid pKF715A:AP015030.1; plasmid pKF715B:AP015031.1; plasmid pKF715C:AP015032.1; plasmid pKF715D:AP015033.1	-	5	7119	7022	12/6/16	12/6/16	Complete Genome	National Institute of Advanced Industrial Science and Technology (AIST)	SAMD00023463	GCA_002356095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/095/GCA_002356095.1_ASM235609v1	-	KF715
Risungbinella massiliensis	1329796	PRJEB1960	204988	Terrabacteria group	Firmicutes	3.4212	40.3	-	CECI01	7	3489	3303	2/11/15	4/10/17	Scaffold	URMITE	SAMEA2770057	GCA_000942395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/395/GCA_000942395.1_Pytheasella_massiliensis	-	GD1
Halomonas meridiana	29570	PRJNA269585	269585	Proteobacteria	Gammaproteobacteria	3.47196	56.7	-	JZEM01	130	3318	3124	3/4/15	4/10/17	Contig	University of Florida	SAMN03255752	GCA_000943375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/375/GCA_000943375.1_ASM94337v1	26451236	R1t3
Streptomyces iranensis	576784	PRJEB5932	248362	Terrabacteria group	Actinobacteria	12.1305	70.9	-	-	7	9953	9289	-	-	Scaffold	HKI JENA	SAMEA2519540	GCA_000938975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/975/GCA_000938975.1_Siranensis	-	-
Rhizobium phaseoli	396	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.74517	61.3665	chromosome:NZ_CP013563.1/CP013563.1; plasmid pRphaN831a:NZ_CP013564.1/CP013564.1; plasmid pRphaN831b:NZ_CP013565.1/CP013565.1; plasmid pRphaN831c:NZ_CP013566.1/CP013566.1; plasmid pRphaN831d:NZ_CP013567.1/CP013567.1	-	5	6574	6231	6/17/16	4/5/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN03998628	GCA_001664125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/125/GCA_001664125.1_ASM166412v1	-	N831
Rhizobium phaseoli	396	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.7455	61.3664	chromosome:NZ_CP013552.1/CP013552.1; plasmid pRphaN931a:NZ_CP013553.1/CP013553.1; plasmid pRphaN931b:NZ_CP013554.1/CP013554.1; plasmid pRphaN931c:NZ_CP013555.1/CP013555.1; plasmid pRphaN931d:NZ_CP013556.1/CP013556.1	-	5	6574	6232	6/17/16	4/5/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN03998630	GCA_001664285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/285/GCA_001664285.1_ASM166428v1	-	N931
Rickettsia raoultii	369822	PRJNA362804	362804	Proteobacteria	Alphaproteobacteria	1.34456	32.5	chromosome:NZ_CP019435.1/CP019435.1	-	1	1560	1185	1/30/17	4/17/17	Chromosome	State Key Laboratory of Pathogen and Biosecurity	SAMN06249243	GCA_001975185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/185/GCA_001975185.1_ASM197518v1	-	IM16
Tamlana nanhaiensis	1382798	PRJNA266858	266858	FCB group	Bacteroidetes/Chlorobi group	4.02082	34.2	-	JTDV01	37	3404	3306	3/4/15	4/10/17	Contig	"Third Institute of Oceanography, State Oceanic Administration"	SAMN03196613	GCA_000943555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/555/GCA_000943555.1_ASM94355v1	25735434	FHC16
Tamlana sedimentorum	1435349	PRJNA267625	267625	FCB group	Bacteroidetes/Chlorobi group	3.96135	32.9	-	JTDW01	52	3396	3306	3/4/15	4/10/17	Contig	"Third Institute of Oceanography, State Oceanic Administration"	SAMN03198753	GCA_000943565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/565/GCA_000943565.1_ASM94356v1	-	JCM 19808
Bacillus alveayuensis	279215	PRJNA260740	260740	Terrabacteria group	Firmicutes	6.70169	38.1	-	JYCE01	197	6717	6393	3/5/15	4/17/17	Contig	Los Alamos National Laboratory	SAMN03025778	GCA_000948175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/175/GCA_000948175.1_BFA_2_A	26316638	24KAM51
Thalassomonas actiniarum	485447	PRJNA271847	271847	Proteobacteria	Gammaproteobacteria	7.42086	47.3	-	JYNI01	132	6306	6106	3/6/15	4/17/17	Scaffold	University of the Western Cape	SAMN03278135	GCA_000948975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/975/GCA_000948975.1_ASM94897v1	25883295	A5K-106
Thalassomonas viridans	137584	PRJNA271846	271846	Proteobacteria	Gammaproteobacteria	7.71024	49	-	JYNJ01	284	6657	6359	3/6/15	4/17/17	Scaffold	University of the Western Cape	SAMN03278134	GCA_000948985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/985/GCA_000948985.1_ASM94898v1	25883295	XOM25
Acidiplasma sp. MBA-1	1293648	PRJNA274893	274893	Euryarchaeota	Thermoplasmata	1.74736	34	-	JYHS01	9	1832	1750	3/6/15	4/10/17	Contig	RIPCM	SAMN03333330	GCA_000949015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/015/GCA_000949015.1_ASM94901v1	-	MBA-1
Rhizobium phaseoli	396	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.75256	61.3645	chromosome:NZ_CP013537.1/CP013537.1; plasmid pRphaR630a:NZ_CP013538.1/CP013538.1; plasmid pRphaR630b:NZ_CP013539.1/CP013539.1; plasmid pRphaR630c:NZ_CP013540.1/CP013540.1; plasmid pRphaR630d:NZ_CP013541.1/CP013541.1	-	5	6543	6225	6/17/16	4/5/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN03998633	GCA_001664205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/205/GCA_001664205.1_ASM166420v1	-	R630
Acidithrix ferrooxidans	1280514	PRJNA273917	273917	Terrabacteria group	Actinobacteria	4.01987	47.7	-	JXYS01	183	3672	3395	3/6/15	4/10/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03301760	GCA_000949295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/295/GCA_000949295.1_ASM94929v1	25931603	Py-F3
Ruthenibacterium lactatiformans	1550024	PRJNA274229	274229	Terrabacteria group	Firmicutes	4.11108	56.5	-	JXXK01	108	4025	3836	3/10/15	4/10/17	Contig	Pirogov Russian National Research Medical University	SAMN03323960	GCA_000949455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/455/GCA_000949455.1_ASM94945v1	-	585-1
Syntrophaceticus schinkii	499207	PRJEB5769	242461	Terrabacteria group	Firmicutes	3.16692	46.6	-	CDRZ01	301	3245	2736	2/7/15	4/17/17	Contig	SLU-GBC	SAMEA3215174	GCA_000946815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/815/GCA_000946815.1_Syntrophaceticus_schinkii	-	Sp3
Candidatus Brocadia sinica JPN1	1197129	PRJDB103	276982	PVC group	Planctomycetes	4.077	42.4	-	BAFN01	3	3798	3639	2/28/15	4/10/17	Contig	Hokkaido University	SAMD00036619	GCA_000949635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/635/GCA_000949635.1_ASM94963v1	25883286	JPN1
Photobacterium kishitanii	318456	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.70967	39	-	JZSP01	117	4198	3963	3/10/15	4/3/17	Contig	FDA/CFSAN	SAMN03295480	GCA_000950095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/095/GCA_000950095.1_CFSAN029432_01.0	-	ATCC BAA-1194
Rouxiella chamberiensis	1513468	PRJNA263737	263737	Proteobacteria	Gammaproteobacteria	4.6521	54.1	-	JRWU01	126	4177	4045	3/11/15	4/10/17	Scaffold	Institut Pasteur	SAMN03106102	GCA_000951135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/951/135/GCA_000951135.1_ASM95113v1	25747423	130333
Aliterella atlantica CENA595	1618023	PRJNA275867	275867	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.2657	42.6	-	JYON01	60	4958	4756	3/13/15	4/10/17	Contig	UNESP-FCAV	SAMN03354289	GCA_000952155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/155/GCA_000952155.1_asmbly001	25908150	CENA595
Aequorivita vladivostokensis	171194	PRJNA262610	262610	FCB group	Bacteroidetes/Chlorobi group	3.26945	40.8	-	JSVU01	25	3075	2981	3/16/15	4/17/17	Contig	"FACULTY OF BIOSCIENCES AND MEDICAL ENGINEERING, UNIVERSITI TEKNOLOGI MALAYSIA"	SAMN03084320	GCA_000952855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/855/GCA_000952855.1_ASM95285v1	-	KMM 3516
Rhizobium phaseoli	396	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.72604	61.3616	chromosome:NZ_CP013532.1/CP013532.1; plasmid pRphaR650a:NZ_CP013533.1/CP013533.1; plasmid pRphaR650b:NZ_CP013534.1/CP013534.1; plasmid pRphaR650c:NZ_CP013535.1/CP013535.1; plasmid pRphaR650d:NZ_CP013536.1/CP013536.1	-	5	6504	6212	6/17/16	4/5/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN03998634	GCA_001664385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/385/GCA_001664385.1_ASM166438v1	-	R650
Photobacterium iliopiscarium	56192	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.48605	39.1	-	JZSR01	289	4082	3802	3/10/15	4/10/17	Contig	FDA/CFSAN	SAMN03295478	GCA_000949935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/935/GCA_000949935.1_CFSAN029430_01.0	-	ATCC 51761
Corynebacterium jeikeium K411	306537	PRJNA13967	13967	Terrabacteria group	Actinobacteria	2.47682	61.3561	chromosome:NC_007164.1/CR931997.1; plasmid pKW4:NC_003080.1/AF401314.1	-	2	2195	2088	6/27/05	3/30/17	Complete Genome	Bielefeld Univ	SAMEA3283089	GCA_000006605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/006/605/GCA_000006605.1_ASM660v1	15968079	K411 = NCTC 11915
Chloracidobacterium thermophilum B	981222	PRJNA62457	62457	Acidobacteria	Blastocatellia	3.69537	61.3452	chromosome 1:NC_016024.1/CP002514.1; chromosome 2:NC_016025.1/CP002515.1	-	2	3073	2969	9/23/11	4/7/17	Complete Genome	The Pennsylvania State University	SAMN02603950	GCA_000226295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/295/GCA_000226295.1_ASM22629v1	21951563	B
Rhizobium etli CIAT 652	491916	PRJNA28021	28021	Proteobacteria	Alphaproteobacteria	6.44805	61.3371	chromosome:NC_010994.1/CP001074.1; plasmid pA:NC_010998.1/CP001075.1; plasmid pB:NC_010996.1/CP001076.1; plasmid pC:NC_010997.1/CP001077.1	-	4	6259	5925	6/19/08	5/19/17	Complete Genome	"Centro de Ciencias Genomicas, Universidad Nacional Autonoma de Mexico"	SAMN02603107	GCA_000020265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/265/GCA_000020265.1_ASM2026v1	-	CIAT 652
Haloterrigena daqingensis	588898	PRJNA329170	329170	Euryarchaeota	Halobacteria	3.8358	61.337	chromosome:NZ_CP019327.1/CP019327.1; plasmid unnamed1:NZ_CP019328.1/CP019328.1; plasmid unnamed2:NZ_CP019329.1/CP019329.1; plasmid unnamed3:NZ_CP019330.1/CP019330.1	-	4	3746	3643	1/26/17	4/17/17	Complete Genome	Heilongjiang Academy 	SAMN05417698	GCA_001971705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/705/GCA_001971705.1_ASM197170v1	-	JX313
Hydrogenophaga crassostreae	1763535	PRJNA341556	341556	Proteobacteria	Betaproteobacteria	4.94413	61.3	chromosome:NZ_CP017476.1/CP017476.1	-	1	4620	4500	10/12/16	4/13/17	Complete Genome	Korea University	SAMN05726019	GCA_001761385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/385/GCA_001761385.1_ASM176138v1	-	LPB0072
Pseudomonas sp. JY-Q	1338689	PRJNA283455	283455	Proteobacteria	Gammaproteobacteria	6.17882	61.3	chromosome:NZ_CP011525.1/CP011525.1	-	1	5728	5440	6/3/16	4/12/17	Complete Genome	university	SAMN03650316	GCA_001655295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/295/GCA_001655295.1_ASM165529v1	-	JY-Q
Mizugakiibacter sediminis	1475481	PRJDB3527	276737	Proteobacteria	Gammaproteobacteria	3.12101	71.3	-	BBUM02	179	2981	2799	2/27/15	4/11/17	Contig	"The Institute of Low Temperature Science, Hokkaido University"	SAMD00026084	GCA_000953855.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/855/GCA_000953855.2_ASM95385v2	26450745	skMP5
Pseudomonas fluorescens	294	PRJNA295937	295937	Proteobacteria	Gammaproteobacteria	7.1191	61.3	chromosome:NZ_CP012831.1/CP012831.1	-	1	6226	6041	10/6/15	4/4/17	Complete Genome	Lawrence Berkeley National Laboratory	SAMN04094107	GCA_001307275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/275/GCA_001307275.1_ASM130727v1	-	FW300-N2C3
Elizabethkingia sp. HvH-WGS333	1883430	PRJNA335686	335686	FCB group	Bacteroidetes/Chlorobi group	4.13007	36	-	MCJF01	69	3794	3704	11/7/16	4/13/17	Contig	"Department of Clinical Microbiology, Copenhagen University Hospital Hvidovre, Denmark"	SAMN05450241	GCA_001867305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/305/GCA_001867305.1_ASM186730v1	-	HvH-WGS333
Thermoanaerobacter cellulolyticus NA10	1387569	PRJNA215341	215341	Terrabacteria group	Firmicutes	2.51498	35.4	-	LACN01	12	2394	1991	3/17/15	4/17/17	Contig	DOE Joint Genome Institute	SAMN02745002	GCA_000955735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/955/735/GCA_000955735.1_ASM95573v1	25977428	NA10
Burkholderiaceae bacterium 16	1619952	PRJNA275245	275245	Proteobacteria	Betaproteobacteria	9.49001	64.7	-	JYOD01	258	8845	8267	3/18/15	4/10/17	Scaffold	Cornell University	SAMN03340298	GCA_000955785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/955/785/GCA_000955785.1_ASM95578v1	-	16
Burkholderiaceae bacterium 26	1619951	PRJNA275245	275245	Proteobacteria	Betaproteobacteria	5.683	63.4	-	JYOB01	44	5292	5151	3/18/15	4/10/17	Scaffold	Cornell University	SAMN03340296	GCA_000955795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/955/795/GCA_000955795.1_ASM95579v1	-	26
Terrabacter sp. Root85	1736603	PRJNA297942	297942	Terrabacteria group	Actinobacteria	4.86533	71.5	-	LMIW01	15	4440	4316	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155872	GCA_001429185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/185/GCA_001429185.1_Root85	26633631	Root85
Microbacterium trichothecenolyticum	69370	PRJNA270387	270387	Terrabacteria group	Actinobacteria	4.52428	70.2	-	JYJA01	41	4098	3962	3/19/15	4/17/17	Contig	Austrian Institute of Technology	SAMN03266141	GCA_000956465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/465/GCA_000956465.1_ASM95646v1	-	DSM 8608
Microbacterium ginsengisoli	400772	PRJNA270387	270387	Terrabacteria group	Actinobacteria	3.04747	70.2	-	JYIY01	80	2994	2867	3/19/15	4/17/17	Contig	Austrian Institute of Technology	SAMN03266139	GCA_000956535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/535/GCA_000956535.1_ASM95653v1	-	DSM 18659
Microbacterium azadirachtae	582680	PRJNA270387	270387	Terrabacteria group	Actinobacteria	4.24318	70.1	-	JYIX01	40	3943	3840	3/19/15	4/10/17	Contig	Austrian Institute of Technology	SAMN03266145	GCA_000956505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/505/GCA_000956505.1_ASM95650v1	25977426	ARN176
Microbacterium ketosireducens	92835	PRJNA270387	270387	Terrabacteria group	Actinobacteria	3.9225	70.3	-	JYIZ01	57	3537	3413	3/19/15	4/17/17	Contig	Austrian Institute of Technology	SAMN03266140	GCA_000956575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/575/GCA_000956575.1_ASM95657v1	-	DSM 12510
Verrucomicrobia bacterium IMCC26134	1637999	PRJNA279927	279927	PVC group	Verrucomicrobia	4.001	61.3	chromosome:NZ_CP011265.1/CP011265.1	-	1	3115	2972	4/16/15	4/10/17	Complete Genome	Inha University	SAMN03452270	GCA_000972765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/765/GCA_000972765.1_ASM97276v1	-	IMCC26134
Rhizobium phaseoli	396	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.90641	61.286	chromosome:NZ_CP013568.1/CP013568.1; plasmid pRphaN671d:NZ_CP013572.1/CP013572.1; plasmid pRphaN771a:NZ_CP013569.1/CP013569.1; plasmid pRphaN771b:NZ_CP013570.1/CP013570.1; plasmid pRphaN771c:NZ_CP013571.1/CP013571.1; plasmid pRphaN771e:NZ_CP013573.1/CP013573.1	-	6	6781	6446	6/17/16	4/5/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN03998627	GCA_001664405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/405/GCA_001664405.1_ASM166440v1	-	N771
Rhizobium phaseoli	396	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.90611	61.2859	chromosome:NZ_CP013574.1/CP013574.1; plasmid pRphaN671a:NZ_CP013575.1/CP013575.1; plasmid pRphaN671b:NZ_CP013576.1/CP013576.1; plasmid pRphaN671c:NZ_CP013577.1/CP013577.1; plasmid pRphaN671d:NZ_CP013578.1/CP013578.1; plasmid pRphaN671e:NZ_CP013579.1/CP013579.1	-	6	6780	6445	6/17/16	4/5/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN03998626	GCA_001664365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/365/GCA_001664365.1_ASM166436v1	-	N671
Streptomyces variegatus	284040	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.77559	71.2	-	JYJH01	233	7968	7492	3/18/15	3/11/17	Contig	University of Illinois	SAMN03323307	GCA_000955965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/955/965/GCA_000955965.1_ASM95596v1	-	NRRL B-16380
Nocardioides luteus	1844	PRJNA275798	275798	Terrabacteria group	Actinobacteria	5.76181	69.9	-	JZDQ02	86	5480	5356	3/23/15	4/17/17	Contig	UDRI	SAMN03353335	GCA_000960475.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/475/GCA_000960475.2_ASM96047v2	-	BAFB
Candidatus Magnetoovum chiemensis	1609970	PRJNA274216	274216	Nitrospirae	Nitrospira	3.81693	40.4	-	JZJI01	1019	4164	4121	3/23/15	3/23/15	Contig	Max Planck Institute for Marine Microbiology	SAMN03323779	GCA_000960725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/725/GCA_000960725.1_ASM96072v1	-	CS-04
Celeribacter ethanolicus	1758178	PRJNA391385	391385	Proteobacteria	Alphaproteobacteria	4.15744	61.2679	chromosome:CP022196.1; plasmid unnamed:CP022197.1	-	2	4122	3985	10/2/17	10/2/17	Complete Genome	Gyeongbuk Institute for Marine Bioindustry(GIMB)	SAMN07267288	GCA_002407265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/407/265/GCA_002407265.1_ASM240726v1	-	TSPH2
Vulcanisaeta sp. EB80	1650660	PRJNA282839	282839	TACK group	Crenarchaeota	1.55727	60.8	-	LCWN01	80	1684	1574	4/3/17	4/5/17	Scaffold	University of Cincinnati	SAMN03580359	GCA_002078205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/205/GCA_002078205.1_ASM207820v1	-	EB80
Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141	1028801	PRJEB1951	212246	Proteobacteria	Alphaproteobacteria	6.41318	61.258	chromosome I:NZ_HG938355.1/HG938355.1; plasmid II:NZ_HG938356.1/HG938356.1; plasmid III:NZ_HG938357.1/HG938357.1	-	3	6232	6058	6/25/14	4/2/17	Complete Genome	UH	SAMEA3139072	GCA_000731295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/295/GCA_000731295.1_RG1141_Ch_pA_pB	24948393	HAMBI 1141
Neorhizobium galegae bv. orientalis str. HAMBI 540	1028800	PRJEB1950	212248	Proteobacteria	Alphaproteobacteria	6.45503	61.248	chromosome I:NZ_HG938353.1/HG938353.1; plasmid II:NZ_HG938354.1/HG938354.1	-	2	6271	6033	6/25/14	4/2/17	Complete Genome	UH	SAMEA3139073	GCA_000731315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/315/GCA_000731315.1_RG540_Ch_pA	24948393	HAMBI 540
Peptococcaceae bacterium BRH_c8a	1629715	PRJNA257561	257561	Terrabacteria group	Firmicutes	4.17403	48	-	LADP01	48	3883	3469	3/24/15	3/24/15	Contig	EPFL	SAMN03400145	GCA_000961575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/575/GCA_000961575.1_41k	-	-
Peptococcaceae bacterium BRH_c4a	1629716	PRJNA257561	257561	Terrabacteria group	Firmicutes	3.49382	49.9	-	LADN01	98	3330	2960	3/24/15	3/24/15	Contig	EPFL	SAMN03400146	GCA_000961585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/585/GCA_000961585.1_41k	-	-
Peptococcaceae bacterium BRH_c4b	1629717	PRJNA257561	257561	Terrabacteria group	Firmicutes	3.62458	47.6	-	LADO01	66	3531	3111	3/24/15	3/24/15	Contig	EPFL	SAMN03400147	GCA_000961595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/595/GCA_000961595.1_41k	-	-
Gammaproteobacteria bacterium BRH_c0	1629722	PRJNA257561	257561	Proteobacteria	Gammaproteobacteria	3.53328	57.4	-	LADM01	140	3249	2967	3/24/15	3/24/15	Contig	EPFL	SAMN03400151	GCA_000961645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/645/GCA_000961645.1_41k	-	-
Desulfatitalea sp. BRH_c12	1629708	PRJNA257561	257561	Proteobacteria	delta/epsilon subdivisions	5.99761	55.1	-	LADR01	91	5046	4427	3/24/15	3/24/15	Contig	EPFL	SAMN03400142	GCA_000961655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/655/GCA_000961655.1_41k	-	-
Hyphomonadaceae bacterium BRH_c29	1629720	PRJNA257561	257561	Proteobacteria	Alphaproteobacteria	3.70022	61.4	-	LADW01	96	3644	3317	3/24/15	3/24/15	Contig	EPFL	SAMN03400153	GCA_000961695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/695/GCA_000961695.1_41k	-	-
Desulfobulbaceae bacterium BRH_c16a	1629713	PRJNA257561	257561	Proteobacteria	delta/epsilon subdivisions	6.51585	51.7	-	LADS01	72	5759	5037	3/24/15	3/24/15	Contig	EPFL	SAMN03400143	GCA_000961725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/725/GCA_000961725.1_41k	-	-
Rhodospirillaceae bacterium BRH_c57	1629718	PRJNA257561	257561	Proteobacteria	Alphaproteobacteria	3.91188	65.4	-	LAEA01	274	3815	3424	3/24/15	3/24/15	Contig	EPFL	SAMN03400148	GCA_000961745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/745/GCA_000961745.1_41k	-	-
Clostridiaceae bacterium BRH_c20a	1629719	PRJNA257561	257561	Terrabacteria group	Firmicutes	4.51287	37	-	LADT01	92	4386	3868	3/24/15	3/24/15	Contig	EPFL	SAMN03400150	GCA_000961765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/765/GCA_000961765.1_41k	-	-
Peptococcaceae bacterium BRH_c23	1629714	PRJNA257561	257561	Terrabacteria group	Firmicutes	6.02719	42.7	-	LADV01	348	5659	5037	3/24/15	3/24/15	Contig	EPFL	SAMN03400144	GCA_000961805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/805/GCA_000961805.1_41k	-	-
Flavobacteriales bacterium BRH_c54	1629721	PRJNA257561	257561	FCB group	Bacteroidetes/Chlorobi group	2.91745	32.2	-	LADZ01	69	2553	2330	3/24/15	3/24/15	Contig	EPFL	SAMN03400155	GCA_000961845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/845/GCA_000961845.1_41k	-	-
Streptomyces rubellomurinus	359131	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.61082	73.7	-	JZKH01	411	7505	7051	3/24/15	3/11/17	Contig	University of Illinois	SAMN03323311	GCA_000961885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/885/GCA_000961885.1_ASM96188v1	-	ATCC 31215
Thermoproteus sp. CP80	1650659	PRJNA282838	282838	TACK group	Crenarchaeota	2.34915	46.2	-	LCWM01	178	2561	2296	4/3/17	4/5/17	Contig	University of Cincinnati	SAMN03580358	GCA_002077075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/075/GCA_002077075.1_ASM207707v1	27037359	CP80
Terrisporobacter othiniensis	1577792	PRJNA268787	268787	Terrabacteria group	Firmicutes	3.98687	28.6	-	JWHR01	166	3857	3643	12/29/14	4/10/17	Contig	Odense University Hospital	SAMN03224221	GCA_000808015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/015/GCA_000808015.1_pear-SPAdes-1.0	25744994	08-306576
Sanguibacteroides justesenii	1547597	PRJNA237488	237488	FCB group	Bacteroidetes/Chlorobi group	3.38552	42.3	-	JPIU01	51	2850	2739	2/3/15	4/10/17	Contig	Odense University Hospital	SAMN02629912	GCA_000832075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/075/GCA_000832075.1_OUH308042_1.0	25814588	OUH 308042
Actinoplanes rectilineatus	113571	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.3203	70.6	-	JZKF01	312	9305	8950	3/25/15	4/16/17	Contig	University of Illinois	SAMN03327476	GCA_000962825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/825/GCA_000962825.1_ASM96282v1	-	NRRL B-16090
Candidatus Magnetobacterium bavaricum	29290	PRJNA274247	274247	Nitrospirae	Nitrospira	6.31044	47.3	-	LACI01	2751	6594	6537	3/25/15	3/25/15	Scaffold	Max Planck Institute for Marine Microbiology	SAMN03324062	GCA_000963235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/235/GCA_000963235.1_ASM96323v1	-	-
Methylococcaceae bacterium Sn10-6	1632867	PRJNA278928	278928	Proteobacteria	Gammaproteobacteria	4.5831	43.9	-	LAJX01	389	4546	3326	3/26/15	4/10/17	Contig	Agharkar Research Institute	SAMN03435121	GCA_000963695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/695/GCA_000963695.1_Methcu1.0	26547566	Sn10-6
Elstera litoralis	552518	PRJNA278930	278930	Proteobacteria	Alphaproteobacteria	3.83204	61.2	-	LAJY01	1012	4148	3108	3/26/15	4/17/17	Contig	Agharkar Research Institute	SAMN03435125	GCA_000963705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/705/GCA_000963705.1_Ellito1.0	-	Dia-1
Rhizobium phaseoli	396	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.85991	61.2168	chromosome:NZ_CP013557.1/CP013557.1; plasmid pRphaN841a:NZ_CP013558.1/CP013558.1; plasmid pRphaN841b:NZ_CP013559.1/CP013559.1; plasmid pRphaN841c:NZ_CP013560.1/CP013560.1; plasmid pRphaN841d:NZ_CP013561.1/CP013561.1; plasmid pRphaN841e:NZ_CP013562.1/CP013562.1	-	6	6735	6401	6/17/16	4/5/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN03998629	GCA_001664425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/425/GCA_001664425.1_ASM166442v1	-	N841
Tanticharoenia sakaeratensis NBRC 103193	1231623	PRJDB503	174854	Proteobacteria	Alphaproteobacteria	3.50675	64.2	-	BALE01	94	3171	3051	3/20/15	4/17/17	Contig	Kinki University	SAMD00036627	GCA_000963885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/885/GCA_000963885.1_ASM96388v1	-	NBRC 103193
Acetobacter cibinongensis 4H-1	1231339	PRJDB503	174854	Proteobacteria	Alphaproteobacteria	3.10509	54.4	-	BAMV01	120	2771	2659	3/20/15	4/17/17	Contig	Kinki University	SAMD00036631	GCA_000963925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/925/GCA_000963925.1_ASM96392v1	-	4H-1
Acetobacter indonesiensis 5H-1	1231340	PRJDB503	174854	Proteobacteria	Alphaproteobacteria	3.41677	53.9	-	BAMW01	181	3066	2913	3/20/15	4/17/17	Scaffold	Kinki University	SAMD00036632	GCA_000963945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/945/GCA_000963945.1_ASM96394v1	-	5H-1
Acetobacter orientalis 21F-2	1231341	PRJDB503	174854	Proteobacteria	Alphaproteobacteria	2.91069	52.4	-	BAMX01	66	2613	2531	3/20/15	4/17/17	Scaffold	Kinki University	SAMD00036633	GCA_000963965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/965/GCA_000963965.1_ASM96396v1	-	21F-2
Luteibacter yeojuensis	345309	PRJNA277278	277278	Proteobacteria	Gammaproteobacteria	4.5489	67.1	-	JZRB01	144	4133	4011	3/27/15	4/17/17	Contig	University of Malaya	SAMN03389089	GCA_000964085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/085/GCA_000964085.1_ASM96408v1	-	SU11
Acetobacter orleanensis	104099	PRJNA288385	288385	Proteobacteria	Alphaproteobacteria	3.00784	56.4	-	LHZV01	67	2704	2552	3/7/16	4/12/17	Contig	Ghent University	SAMN03799295	GCA_001581005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/005/GCA_001581005.1_ASM158100v1	-	LMG 1583
Rhizobium sp. N731	1703966	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.27451	61.2063	chromosome:NZ_CP013601.1/CP013601.1; plasmid pRspN731a:NZ_CP013602.1/CP013602.1; plasmid pRspN731b:NZ_CP013603.1/CP013603.1; plasmid pRspN731c:NZ_CP013604.1/CP013604.1; plasmid pRspN731d:NZ_CP013605.1/CP013605.1; plasmid pRspN731e:NZ_CP013606.1/CP013606.1	-	6	6122	5829	6/17/16	4/13/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN03998643	GCA_001664145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/145/GCA_001664145.1_ASM166414v1	-	N731
Acetobacter syzygii	146476	PRJNA375758	375758	Proteobacteria	Alphaproteobacteria	2.96023	55.2	-	NDFO01	64	2758	2621	8/29/17	8/30/17	Contig	SysMilk	SAMN06718500	GCA_002276785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/785/GCA_002276785.1_ASM227678v1	-	KR-1
Acidisphaera rubrifaciens HS-AP3	1231350	PRJDB503	174854	Proteobacteria	Alphaproteobacteria	3.86227	70.3	-	BANB01	1239	3793	3180	3/20/15	4/17/17	Scaffold	Kinki University	SAMD00036637	GCA_000964365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/365/GCA_000964365.1_ASM96436v1	-	HS-AP3
Acidocella aminolytica 101 = DSM 11237	1120923	PRJEB18147	355481	Proteobacteria	Alphaproteobacteria	3.96482	58.9	-	FQVJ01	109	3918	3650	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02746095	GCA_900129125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/125/GCA_900129125.1_IMG-taxon_2582581264_annotated_assembly	-	DSM 11237
Teredinibacter sp. 1162T.S.0a.05	1286364	PRJNA187105	187105	Proteobacteria	Gammaproteobacteria	4.40496	47.7	-	LANB01	1	3652	3571	3/27/15	4/10/17	Contig	DOE Joint Genome Institute	SAMN02746023	GCA_000964245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/245/GCA_000964245.1_ASM96424v1	-	1162T.S.0a.05
Comamonas thiooxydans	363952	PRJNA288996	288996	Proteobacteria	Betaproteobacteria	5.26863	61.6	-	LIOM01	40	4839	4674	10/28/15	4/11/17	Scaffold	Joint Genome Institute	SAMN03840638	GCA_001418295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/295/GCA_001418295.1_ASM141829v1	-	DSM 17888
Orientia chuto str. Dubai	1359168	PRJNA212443	212443	Proteobacteria	Alphaproteobacteria	1.0922	29.2	-	LANP01	47	1024	747	3/27/15	9/7/17	Contig	IGS	SAMN02666745	GCA_000964595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/595/GCA_000964595.1_ASM96459v1	-	Dubai
Candidatus Neoehrlichia lotoris str. RAC413	1359163	PRJNA212453	212453	Proteobacteria	Alphaproteobacteria	1.26866	27.8	-	LANX01	1	952	905	3/27/15	4/17/17	Contig	IGS	SAMN02402774	GCA_000964795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/795/GCA_000964795.1_ASM96479v1	-	RAC413
Rickettsia endosymbiont of Ixodes pacificus	1133329	PRJNA232537	232537	Proteobacteria	Alphaproteobacteria	1.56473	32.2	-	LAOP01	7	1785	1281	3/27/15	4/10/17	Contig	IGS	SAMN02665668	GCA_000965155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/155/GCA_000965155.1_ASM96515v1	-	Humboldt
Rickettsia argasii T170-B	1268837	PRJNA232538	232538	Proteobacteria	Alphaproteobacteria	1.43788	32.3	-	LAOQ01	30	1702	1243	3/27/15	4/10/17	Contig	IGS	SAMN02666743	GCA_000965185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/185/GCA_000965185.1_ASM96518v1	-	T170-B
Lactobacillus spicheri DSM 15429	1423805	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.7492	55.9	-	AZFC01	37	2514	2433	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369497	GCA_001435095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/095/GCA_001435095.1_ASM143509v1	26415554	DSM 15429
Domibacillus robiginosus	1071054	PRJNA278098	278098	Terrabacteria group	Firmicutes	4.68943	42.7	-	LAHL01	106	4640	4431	3/30/15	4/10/17	Contig	Korea Polar Research Institute	SAMN03406599	GCA_000966195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/195/GCA_000966195.1_ASM96619v1	-	WS 4628
Domibacillus enclensis	1017273	PRJEB18854	360732	Terrabacteria group	Firmicutes	3.83573	46.5	-	FTLX01	24	3804	3682	1/14/17	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443094	GCA_900156125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/125/GCA_900156125.1_IMG-taxon_2708742528_annotated_assembly	-	NIO-1016
Alteromonadaceae bacterium Bs12	1304902	PRJNA195847	195847	Proteobacteria	Gammaproteobacteria	4.92124	45.7	-	JDFY01	3	4523	4383	3/30/15	4/10/17	Contig	DOE Joint Genome Institute	SAMN02745865	GCA_000966245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/245/GCA_000966245.1_ASM96624v1	-	Bs12
Mycobacterium lepromatosis	480418	PRJNA254202	254202	Terrabacteria group	Actinobacteria	3.20674	57.9	-	JRPY01	126	2978	1996	3/30/15	4/10/17	Scaffold	Ecole Polytechnique Federale de Lausanne	SAMN02900753	GCA_000966355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/355/GCA_000966355.1_ASM96635v1	25831531	Mx1-22A
Borreliella finlandensis	498741	PRJNA28631	28631	Spirochaetes	Spirochaetia	1.28178	28.2736	plasmid SV1_cp26:NC_012267.1/CP001522.1; plasmid SV1_cp32-3:NC_012252.1/CP001517.1; plasmid SV1_cp32-4:NC_012260.1/CP001520.1; plasmid SV1_cp32-7:NC_012265.1/CP001521.1; plasmid SV1_lp17:NC_012242.1/CP001519.1; plasmid SV1_lp28-2:NC_012239.1/CP001518.1; plasmid SV1_lp28-4:NC_012230.1/CP001523.1; plasmid SV1_lp32-12:NC_012247.1/CP001516.1; plasmid SV1_lp54:NC_012234.1/CP001524.1	ABJZ02	16	1307	1142	2/6/08	9/3/17	Scaffold	J. Craig Venter Institute	SAMN02436286	GCA_000181875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/181/875/GCA_000181875.2_ASM18187v2	21217002	SV1
Pantoea anthophila	470931	PRJNA274021	274021	Proteobacteria	Gammaproteobacteria	4.60068	56.8	-	JXXL01	16	4313	4160	4/6/15	4/17/17	Contig	University of Hawaii at Manoa	SAMN03320104	GCA_000969395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/395/GCA_000969395.1_ASM96939v1	25977417	2-Nov
Devosia geojensis	443610	PRJNA277015	277015	Proteobacteria	Alphaproteobacteria	4.46506	65.9	-	JZEX01	207	4303	4190	4/6/15	4/17/17	Contig	Agriculture and Agri-Food Canada	SAMN03383337	GCA_000969415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/415/GCA_000969415.1_ASM96941v1	26251505	BD-c194
Devosia chinhatensis	429727	PRJNA277024	277024	Proteobacteria	Alphaproteobacteria	3.49772	62.4	-	JZEY01	98	3331	3257	4/6/15	4/17/17	Contig	Agriculture and Agri-Food Canada	SAMN03383426	GCA_000969445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/445/GCA_000969445.1_ASM96944v1	26251505	IPL18
Aquincola tertiaricarbonis	391953	PRJNA277989	277989	Proteobacteria	Betaproteobacteria	6.31958	70.2	-	JZUE01	95	5735	5573	4/6/15	4/16/17	Scaffold	"Inner Mongolia agricultural university, college of life science"	SAMN03399925	GCA_000969605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/605/GCA_000969605.1_ASM96960v1	-	MIMtkpLc11
Arcobacter faecis	1564138	PRJNA235201	235201	Proteobacteria	delta/epsilon subdivisions	2.49688	27.2	-	JARS01	53	2490	2376	3/3/14	4/9/17	Scaffold	Agriculture and Agri-Food Canada	SAMN02951872	GCA_000585155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/155/GCA_000585155.1_Arcobacter_septicus_AF1078	24699950	AF1078
Rhizobium sp. N1314	1703961	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.27451	61.2063	chromosome:NZ_CP013511.1/CP013511.1; plasmid pRspN1314a:NZ_CP013512.1/CP013512.1; plasmid pRspN1314b:NZ_CP013513.1/CP013513.1; plasmid pRspN1314c:NZ_CP013514.1/CP013514.1; plasmid pRspN1314d:NZ_CP013515.1/CP013515.1; plasmid pRspN1314e:NZ_CP013516.1/CP013516.1	-	6	6121	5828	6/17/16	4/12/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN03998638	GCA_001664305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/305/GCA_001664305.1_ASM166430v1	-	N1314
Lactobacillus kullabergensis	1218493	PRJNA257142	257142	Terrabacteria group	Firmicutes	2.11838	35.8	-	JXBY01	7	1982	1894	3/31/15	4/17/17	Scaffold	Uppsala university	SAMN03271965	GCA_000967195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/195/GCA_000967195.1_ASM96719v1	-	Biut2
Lactobacillus mellis	1218508	PRJNA257182	257182	Terrabacteria group	Firmicutes	1.8106	36.4	-	JXBZ01	7	1711	1629	3/31/15	4/17/17	Scaffold	Uppsala university	SAMN03271966	GCA_000967245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/245/GCA_000967245.1_ASM96724v1	-	Hon2
Vibrio neptunius	170651	PRJNA242743	242743	Proteobacteria	Gammaproteobacteria	5.202	45	-	JXXU01	173	4725	4546	4/1/15	4/17/17	Contig	Technical University of Denmark	SAMN03323927	GCA_000967495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/495/GCA_000967495.1_S2394	25879706	S2394
Desulfuromonas soudanensis	1603606	PRJNA272946	272946	Proteobacteria	delta/epsilon subdivisions	3.95862	61.2	chromosome:NZ_CP010802.1/CP010802.1	-	1	3575	3454	9/2/15	9/25/17	Complete Genome	University of Minnesota	SAMN03287929	GCA_001278055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/055/GCA_001278055.1_ASM127805v1	-	WTL
Geobacter sp. M18	443143	PRJNA33159	33159	Proteobacteria	delta/epsilon subdivisions	5.27741	61.2	chromosome:NC_014973.1/CP002479.1	-	1	4579	4436	1/27/11	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002553	GCA_000175115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/115/GCA_000175115.2_ASM17511v2	-	M18
Methanopyrus kandleri AV19	190192	PRJNA294	294	Euryarchaeota	Methanopyri	1.69497	61.2	chromosome:AE009439.1	-	1	1729	1687	4/3/02	1/30/14	Complete Genome	Fidelity Systems	SAMN02603235	GCA_000007185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/185/GCA_000007185.1_ASM718v1	-	AV19
Rhizobium sp. Kim5	2020311	PRJNA29555	29555	Proteobacteria	Alphaproteobacteria	6.81726	61.1981	chromosome:NZ_CP021124.1/CP021124.1; plasmid pRetKim5a:NZ_CP021125.1/CP021125.1; plasmid pRetKim5b:NZ_CP021126.1/CP021126.1; plasmid pRetKim5c:NZ_CP021127.1/CP021127.1; plasmid pRetKim5d:NZ_CP021128.1/CP021128.1	-	5	6677	6292	4/21/17	7/19/17	Complete Genome	"Centro de Ciencias Genomicas, Universidad Nacional Autonoma de Mexico"	SAMN02469451	GCA_000172695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/695/GCA_000172695.2_ASM17269v2	-	Kim5
Rhizobium sp. TAL182	2020313	PRJNA294178	294178	Proteobacteria	Alphaproteobacteria	6.40238	61.1892	chromosome:NZ_CP021024.1/CP021024.1; plasmid pRetTAL182a:NZ_CP021025.1/CP021025.1; plasmid pRetTAL182b:NZ_CP021026.1/CP021026.1; plasmid pRetTAL182c:NZ_CP021027.1/CP021027.1; plasmid pRetTAL182d:NZ_CP021028.1/CP021028.1; plasmid pRetTAL182e:NZ_CP021029.1/CP021029.1	-	6	6307	5986	5/3/17	8/12/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN05928285	GCA_002117725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/725/GCA_002117725.1_ASM211772v1	-	TAL182
Rhizobium leguminosarum bv. trifolii WSM2304	395492	PRJNA20179	20179	Proteobacteria	Alphaproteobacteria	6.8727	61.1684	chromosome:NC_011369.1/CP001191.1; plasmid pRLG201:NC_011368.1/CP001192.1; plasmid pRLG202:NC_011366.1/CP001193.1; plasmid pRLG203:NC_011370.1/CP001195.1; plasmid pRLG204:NC_011371.1/CP001194.1	-	5	6690	6437	10/16/08	7/9/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000679	GCA_000021345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/345/GCA_000021345.1_ASM2134v1	21304679	WSM2304
Sinorhizobium medicae WSM419	366394	PRJNA16304	16304	Proteobacteria	Alphaproteobacteria	6.81758	61.1627	chromosome:NC_009636.1/CP000738.1; plasmid pSMED01:NC_009620.1/CP000739.1; plasmid pSMED02:NC_009621.1/CP000740.1; plasmid pSMED03:NC_009622.1/CP000741.1	-	4	6585	6213	6/29/07	7/27/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598363	GCA_000017145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/145/GCA_000017145.1_ASM1714v1	21304680	WSM419
Devosia soli	361041	PRJNA278778	278778	Proteobacteria	Alphaproteobacteria	4.13637	61	-	LAJG01	48	4043	3930	4/7/15	4/17/17	Contig	Agriculture and Agri-Food Canada	SAMN03431281	GCA_000970455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/455/GCA_000970455.1_ASM97045v1	25999556	GH2-10
Devosia insulae DS-56	1116389	PRJNA278770	278770	Proteobacteria	Alphaproteobacteria	5.75012	65.3	-	LAJE02	410	5629	5440	4/7/15	4/17/17	Contig	Agriculture and Agri-Food Canada	SAMN03431276	GCA_000970465.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/465/GCA_000970465.2_ASM97046v2	25999556	DS-56
Domibacillus indicus	1437523	PRJNA278099	278099	Terrabacteria group	Firmicutes	3.60425	44.5	-	LAJB01	32	3649	3511	4/8/15	4/10/17	Contig	Korea Polar Research Institute	SAMN03406600	GCA_000970685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/685/GCA_000970685.1_ASM97068v1	-	SD 111
Candidatus Arcanobacter lacustris	1607817	PRJNA272967	272967	Proteobacteria	Alphaproteobacteria	0.822563	32.6	-	JYHA01	151	893	882	4/8/15	4/23/15	Contig	Uppsala University	SAMN03288865	GCA_000970895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/895/GCA_000970895.1_ASM97089v1	25848874	SCGC AAA041-L04
Mycobacterium arupense	342002	PRJNA280139	280139	Terrabacteria group	Actinobacteria	4.44141	67.3	-	LASW02	173	4213	3957	4/8/15	4/17/17	Contig	UCSF	SAMN03457165	GCA_000970885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/885/GCA_000970885.2_ASM97088v2	26067970	GUC1
Haloarcula marismortui ATCC 43049	272569	PRJNA105	105	Euryarchaeota	Halobacteria	4.27464	61.1403	chromosome I:NC_006396.1/AY596297.1; chromosome II:NC_006397.1/AY596298.1; plasmid pNG100:NC_006389.1/AY596290.1; plasmid pNG200:NC_006390.1/AY596291.1; plasmid pNG300:NC_006391.1/AY596292.1; plasmid pNG400:NC_006392.1/AY596293.1; plasmid pNG500:NC_006393.1/AY596294.1; plasmid pNG600:NC_006394.1/AY596295.1; plasmid pNG700:NC_006395.1/AY596296.1	-	9	4299	4144	11/2/04	3/22/17	Complete Genome	Institute for Systems Biology	SAMN02603385	GCA_000011085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/085/GCA_000011085.1_ASM1108v1	15520287	ATCC 43049
Chelativorans sp. BNC1	266779	PRJNA10690	10690	Proteobacteria	Alphaproteobacteria	4.93518	61.1217	chromosome:NC_008254.1/CP000390.1; plasmid 1:NC_008242.1/CP000389.1; plasmid 2:NC_008243.1/CP000391.1; plasmid 3:NC_008244.1/CP000392.1	-	4	4711	4574	7/11/06	5/18/17	Complete Genome	DOE Joint Genome Institute	SAMN02598260	GCA_000014245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/245/GCA_000014245.1_ASM1424v1	-	BNC1
Devosia limi DSM 17137	1121477	PRJEB18179	355446	Proteobacteria	Alphaproteobacteria	4.29765	62.7	-	FQVC01	25	4092	3979	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745223	GCA_900128975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/975/GCA_900128975.1_IMG-taxon_2582580747_annotated_assembly	-	DSM 17137
Mycobacterium nebraskense	244292	PRJNA280203	280203	Terrabacteria group	Actinobacteria	6.46062	66.6	-	LASX01	834	6389	5565	4/8/15	4/10/17	Contig	UCSF	SAMN03458449	GCA_000970875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/875/GCA_000970875.1_ASM97087v1	-	AKUC1
Devosia epidermidihirudinis	1293439	PRJNA279499	279499	Proteobacteria	Alphaproteobacteria	3.85978	61.1	-	LANJ01	47	3719	3640	4/9/15	4/10/17	Contig	Agriculture and Agri-Food Canada	SAMN03448481	GCA_000971295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/295/GCA_000971295.1_ASM97129v1	-	E84
Devosia psychrophila	728005	PRJNA279513	279513	Proteobacteria	Alphaproteobacteria	4.51956	61.1	-	LAPV01	239	4410	4110	4/9/15	4/10/17	Contig	Agriculture and Agri-Food Canada	SAMN03448634	GCA_000971275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/275/GCA_000971275.1_ASM97127v1	-	Cr7-05
Paenibacillus wulumuqiensis	1567107	PRJNA279433	279433	Terrabacteria group	Firmicutes	5.24071	49.2	-	LAQP01	33	4537	4398	4/15/15	4/10/17	Scaffold	Nanjing Tech University	SAMN03447299	GCA_000971965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/965/GCA_000971965.1_ASM97196v1	26184946	Y24
Paenibacillus dauci	1567106	PRJNA279435	279435	Terrabacteria group	Firmicutes	5.44924	46.5	-	LAQQ01	19	4653	4530	4/15/15	4/10/17	Scaffold	Nanjing Tech University	SAMN03447476	GCA_000971985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/985/GCA_000971985.1_ASM97198v1	-	H9
Arthrobacter nitrophenolicus	683150	PRJNA184692	184692	Terrabacteria group	Actinobacteria	4.38962	66.2	-	AOFD01	142	4144	3197	1/23/13	5/18/17	Contig	"Institute of Microbial Technology (IMTECH), Chandigarh, India 160036"	SAMN02470004	GCA_000332815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/815/GCA_000332815.1_Whole_genome_assembly	23516196	SJCon
Limnoraphis robusta CS-951	1637645	PRJNA279819	279819	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.31412	41.6	-	LATL02	361	6305	5716	4/16/15	4/10/17	Scaffold	Griffith University	SAMN03450766	GCA_000972705.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/705/GCA_000972705.2_ASM97270v2	26337872	CS-951
Rhizobium sp. N741	1703967	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.55635	61.1198	chromosome:NZ_CP013595.1/CP013595.1; plasmid pRspN741a:NZ_CP013596.1/CP013596.1; plasmid pRspN741b:NZ_CP013597.1/CP013597.1; plasmid pRspN741c:NZ_CP013598.1/CP013598.1; plasmid pRspN741d:NZ_CP013599.1/CP013599.1; plasmid pRspN741e:NZ_CP013600.1/CP013600.1	-	6	6430	6088	6/17/16	4/12/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN03998644	GCA_001664545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/545/GCA_001664545.1_ASM166454v1	-	N741
Rhizobium sp. CIAT894	2020312	PRJNA29565	29565	Proteobacteria	Alphaproteobacteria	6.65795	61.1094	chromosome:NZ_CP020947.1/CP020947.1; plasmid pRheCIAT894a:NZ_CP020948.1/CP020948.1; plasmid pRheCIAT894b:NZ_CP020949.1/CP020949.1; plasmid pRheCIAT894c:NZ_CP020950.1/CP020950.1; plasmid pRheCIAT894d:NZ_CP020951.1/CP020951.1; plasmid pRheCIAT894e:NZ_CP020952.1/CP020952.1	-	6	6425	6138	4/25/17	7/19/17	Complete Genome	"Centro de Ciencias Genomicas, Universidad Nacional Autonoma de Mexico"	SAMN02469455	GCA_000172795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/795/GCA_000172795.2_ASM17279v2	-	CIAT894
Pseudomonas veronii	76761	PRJNA355625	355625	Proteobacteria	Gammaproteobacteria	6.85281	61.1	chromosome:NZ_CP018420.1/CP018420.1	-	1	6305	6080	3/15/17	3/17/17	Complete Genome	University of Applied Sciences and Arts Western Switzerland	SAMN06076152	GCA_002028325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/325/GCA_002028325.1_ASM202832v1	28276609	R02
Grimontia sp. AD028	1581149	PRJNA269560	269560	Proteobacteria	Gammaproteobacteria	5.46267	48.7	-	LASY01	226	4858	4722	4/17/15	4/10/17	Contig	University of Malaya	SAMN03256165	GCA_000973155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/155/GCA_000973155.1_ASM97315v1	-	AD028
Aeromonas hydrophila	644	PRJNA278509	278509	Proteobacteria	Gammaproteobacteria	4.90827	61.1	chromosome:NZ_CP011100.1/CP011100.1	-	1	4561	4292	3/26/15	4/3/17	Complete Genome	Shanghai Ocean University 	SAMN03421355	GCA_000963645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/645/GCA_000963645.1_ASM96364v1	-	AH10
Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628	1349767	PRJEB4003	252444	Proteobacteria	Betaproteobacteria	5.949	61.1	chromosome I:NZ_HG322949.1/HG322949.1	-	1	5204	5023	1/6/14	4/9/17	Complete Genome	HKI	SAMEA3139017	GCA_000723165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/165/GCA_000723165.1_JAG1	25883287	DSM 9628
Lactobacillus apis	303541	PRJNA257137	257137	Terrabacteria group	Firmicutes	1.71738	36.9	-	JXLG01	7	1606	1535	3/31/15	4/10/17	Scaffold	Uppsala university	SAMN03275733	GCA_000970735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/735/GCA_000970735.1_ASM97073v1	-	Hma11
Rhizobium sp. N871	1703968	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.479	61.0971	chromosome:NZ_CP013590.1/CP013590.1; plasmid pRspN871a:NZ_CP013591.1/CP013591.1; plasmid pRspN871b:NZ_CP013592.1/CP013592.1; plasmid pRspN871c:NZ_CP013593.1/CP013593.1; plasmid pRspN871d:NZ_CP013594.1/CP013594.1	-	5	6357	6021	6/17/16	4/12/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN03998645	GCA_001664525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/525/GCA_001664525.1_ASM166452v1	-	N871
Sulfuricella sp. T08	1632857	PRJDB3762	279243	Proteobacteria	Betaproteobacteria	3.42353	56.9	-	BBWF01	78	3325	3216	3/25/15	6/20/17	Scaffold	"The Institute of Low Temperature Science, Hokkaido University"	SAMD00027816	GCA_000971475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/475/GCA_000971475.1_ASM97147v1	25999549	T08
Aquamicrobium sp. SK-2	1560338	PRJDB3210	269696	Proteobacteria	Alphaproteobacteria	9.22646	66	-	BBWE01	180	-	-	3/25/15	6/2/15	Contig	Muroran Institute of Technology	SAMD00022934	GCA_000971495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/495/GCA_000971495.1_ASM97149v1	25977427	SK-2
Spongiibacter marinus DSM 19753	1122224	PRJNA188866	188866	Proteobacteria	Gammaproteobacteria	3.43554	55.1	-	AULP01	21	3229	3139	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440685	GCA_000422345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/345/GCA_000422345.1_ASM42234v1	-	DSM 19753
Pseudomonas syringae pv. coryli	317659	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.96599	59.2	-	LJQC01	1143	5795	4958	10/20/15	4/11/17	Scaffold	University of Toronto	SAMN03976285	GCA_001400235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/235/GCA_001400235.1_PcrICMP17001	-	ICMP17001
Lactobacillus kimbladii	1218506	PRJNA257141	257141	Terrabacteria group	Firmicutes	2.18698	36	-	JXLH01	13	2029	1942	3/31/15	4/17/17	Scaffold	Uppsala university	SAMN03275734	GCA_000970755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/755/GCA_000970755.1_ASM97075v1	-	Hma2
Lactobacillus melliventris	1218507	PRJNA257139	257139	Terrabacteria group	Firmicutes	2.11615	35.9	-	JXLI01	9	2031	1941	3/31/15	4/17/17	Scaffold	Uppsala university	SAMN03275746	GCA_000970775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/775/GCA_000970775.1_ASM97077v1	-	Hma8
Rhizobium etli	29449	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.47865	61.097	chromosome:NZ_CP013500.1/CP013500.1; plasmid pRspN561a:NZ_CP013501.1/CP013501.1; plasmid pRspN561b:NZ_CP013502.1/CP013502.1; plasmid pRspN561c:NZ_CP013503.1/CP013503.1; plasmid pRspN561d:NZ_CP013504.1/CP013504.1	-	5	6359	6023	6/17/16	4/10/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN03998640	GCA_001664265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/265/GCA_001664265.1_ASM166426v1	-	N561
Lactobacillus mellifer	1218492	PRJNA257185	257185	Terrabacteria group	Firmicutes	1.81505	39.5	-	JXJQ01	11	1710	1626	3/31/15	4/17/17	Scaffold	Uppsala university	SAMN03275731	GCA_000970795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/795/GCA_000970795.1_ASM97079v1	-	Bin4
Lactobacillus helsingborgensis	1218494	PRJNA257138	257138	Terrabacteria group	Firmicutes	2.02025	36.4	-	JXJR01	10	1867	1783	3/31/15	4/17/17	Scaffold	Uppsala university	SAMN03275732	GCA_000970855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/855/GCA_000970855.1_ASM97085v1	-	Bma5
Geofilum rubicundum JCM 15548	1236989	PRJDB678	243660	FCB group	Bacteroidetes/Chlorobi group	4.9214	44.8	-	BAZW01	212	4155	3526	3/26/15	4/17/17	Contig	The University of Tokyo	SAMD00000449	GCA_000974365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/365/GCA_000974365.1_ASM97436v1	25736980	JCM 15548
Rhizobium sp. N113	1703960	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.52434	61.0969	chromosome:NZ_CP013517.1/CP013517.1; plasmid pRspN113a:NZ_CP013518.1/CP013518.1; plasmid pRspN113b:NZ_CP013519.1/CP013519.1; plasmid pRspN113c:NZ_CP013520.1/CP013520.1; plasmid pRspN113d:NZ_CP013521.1/CP013521.1	-	5	6339	5994	6/17/16	4/12/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN03998637	GCA_001664345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/345/GCA_001664345.1_ASM166434v1	-	N113
Cupriavidus pauculus	82633	PRJDB3354	274833	Proteobacteria	Betaproteobacteria	6.8268	64	-	BBQN01	227	6328	5995	2/6/15	4/17/17	Contig	National Institute of Advanced Industrial Science and Technology (AIST)	SAMD00023460	GCA_000974605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/605/GCA_000974605.1_ASM97460v1	25814614	KF709
Pseudomonas toyotomiensis	554344	PRJDB3355	274834	Proteobacteria	Gammaproteobacteria	5.59672	62.6	-	BBQO01	29	5226	5069	2/6/15	4/10/17	Contig	National Institute of Advanced Industrial Science and Technology (AIST)	SAMD00023461	GCA_000974625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/625/GCA_000974625.1_ASM97462v1	25838482	KF710
Demequina flava	1095025	PRJDB3263	276645	Terrabacteria group	Actinobacteria	2.54697	64.7	-	BBRA01	3	2400	2330	2/26/15	4/10/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00022564	GCA_000975035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/975/035/GCA_000975035.1_ASM97503v1	25883289	NBRC 105854
Demequina sediminicola	1095026	PRJDB3263	276645	Terrabacteria group	Actinobacteria	2.46099	62.7	-	BBRB01	11	2300	2228	2/26/15	4/10/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00022569	GCA_000975055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/975/055/GCA_000975055.1_ASM97505v1	25883289	NBRC 105855
Demequina lutea	431489	PRJDB3263	276645	Terrabacteria group	Actinobacteria	2.64374	65.9	-	BBRC01	52	2543	2432	2/26/15	4/17/17	Contig	National Institute of Technology and Evaluation Biological Resource Center	SAMD00022566	GCA_000975075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/975/075/GCA_000975075.1_ASM97507v1	25883289	NBRC 106155
Demequina aestuarii	327095	PRJDB3263	276645	Terrabacteria group	Actinobacteria	2.79039	69.1	-	BBRD01	6	2623	2554	2/26/15	4/17/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00022562	GCA_000975095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/975/095/GCA_000975095.1_ASM97509v1	25883289	NBRC 106260
Demequina oxidasica	676199	PRJDB3263	276645	Terrabacteria group	Actinobacteria	2.62356	64.1	-	BBRE01	8	2402	2339	2/26/15	4/17/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00022567	GCA_000975115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/975/115/GCA_000975115.1_ASM97511v1	25883289	NBRC 106264
Demequina aurantiaca	676200	PRJDB3263	276645	Terrabacteria group	Actinobacteria	2.56569	64.6	-	BBRF01	6	2324	2256	2/26/15	4/17/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00022563	GCA_000975135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/975/135/GCA_000975135.1_ASM97513v1	25883289	NBRC 106265
Demequina globuliformis	676202	PRJDB3263	276645	Terrabacteria group	Actinobacteria	2.62235	66.3	-	BBRG01	8	2464	2398	2/26/15	4/17/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00022565	GCA_000975155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/975/155/GCA_000975155.1_ASM97515v1	25883289	NBRC 106266
alpha proteobacterium U9-1i	1605283	PRJDB3470	275083	Proteobacteria	Alphaproteobacteria	4.05325	63.3	-	BBSY01	5	4126	4039	2/7/15	8/21/17	Contig	Akita Prefectural University	SAMD00025051	GCA_000974665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/665/GCA_000974665.1_ASM97466v1	-	U9-1i
Ferriphaselus amnicola	1188319	PRJDB3480	280268	Proteobacteria	Betaproteobacteria	2.685	55.9	-	BBTH01	23	2670	2581	4/1/15	6/20/17	Contig	RIKEN BioResource Center	SAMD00025396	GCA_000974685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/685/GCA_000974685.1_ASM97468v1	26617599	OYT1
Demequina salsinemoris	577470	PRJDB3263	276645	Terrabacteria group	Actinobacteria	3.20952	70.2	-	BBQZ01	20	2935	2848	2/26/15	4/17/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00022568	GCA_000974805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/805/GCA_000974805.1_ASM97480v1	25883289	NBRC 105323
Mycobacterium obuense	1807	PRJNA257469	257469	Terrabacteria group	Actinobacteria	5.71064	68	-	JYNU01	58	5468	5253	7/1/15	4/10/17	Contig	Uppsala University	SAMN02952053	GCA_001044245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/245/GCA_001044245.1_ASM104424v1	26079817	DSM 44075
Heliobacterium sp. N15.MGS-306	1637507	PRJNA277012	277012	Terrabacteria group	Firmicutes	2.06153	36.9	-	LARK01	80	-	-	4/24/15	6/10/15	Contig	The Mayo Clinic	SAMN03450003	GCA_000980455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/455/GCA_000980455.1_ASM98045v1	26021920	-
Rhodospirillum sp. UNK.MGS-17	1638782	PRJNA277012	277012	Proteobacteria	Alphaproteobacteria	1.8836	46.7	-	LBCH01	35	-	-	4/24/15	6/10/15	Scaffold	The Mayo Clinic	SAMN03456684	GCA_000980655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/655/GCA_000980655.1_ASM98065v1	26021920	-
Allosalinactinospora lopnorensis	1352348	PRJNA278354	278354	Terrabacteria group	Actinobacteria	5.89247	69.6	-	LAJC01	220	5382	4526	4/27/15	4/10/17	Contig	University of Macau	SAMN03418058	GCA_000981225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/225/GCA_000981225.1_ASM98122v1	26864220	CA15-2
Rhizobium etli bv. phaseoli str. IE4803	1432049	PRJNA231318	231318	Proteobacteria	Alphaproteobacteria	6.99743	61.096	chromosome RetIE4803:NZ_CP007641.1/CP007641.1; plasmid pRetIE4803a:NZ_CP007642.1/CP007642.1; plasmid pRetIE4803b:NZ_CP007643.1/CP007643.1; plasmid pRetIE4803c:NZ_CP007644.1/CP007644.1; plasmid pRetIE4803d:NZ_CP007645.1/CP007645.1	-	5	6765	6347	1/7/15	4/3/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN02423217	GCA_000816125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/125/GCA_000816125.1_ASM81612v1	-	IE4803
Cryomorphaceae bacterium ASP10-05a	1622232	PRJNA276743	276743	FCB group	Bacteroidetes/Chlorobi group	2.89173	38.2	-	LAQC01	44	-	-	4/28/15	4/28/15	Contig	Marine Biological Laboratory	SAMN03380217	GCA_000981645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/645/GCA_000981645.1_ASM98164v1	-	-
Flavobacteriaceae bacterium ASP10-09a	1622233	PRJNA276743	276743	FCB group	Bacteroidetes/Chlorobi group	2.37156	30.4	-	LAQA01	71	-	-	4/28/15	4/28/15	Contig	Marine Biological Laboratory	SAMN03380219	GCA_000981625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/625/GCA_000981625.1_ASM98162v1	-	-
marine gamma proteobacterium ASP10-03a	1620948	PRJNA276743	276743	Proteobacteria	Gammaproteobacteria	3.21655	45.6	-	LAQE01	142	-	-	4/28/15	4/28/15	Contig	Marine Biological Laboratory	SAMN03380215	GCA_000981685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/685/GCA_000981685.1_ASM98168v1	-	-
Rhodobacteraceae bacterium ASP10-04a	1622230	PRJNA276743	276743	Proteobacteria	Alphaproteobacteria	2.80637	47.9	-	LAQD01	61	-	-	4/28/15	4/28/15	Contig	Marine Biological Laboratory	SAMN03380216	GCA_000981705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/705/GCA_000981705.1_ASM98170v1	-	-
Oceanospirillaceae bacterium ASP10-02a	1622229	PRJNA276743	276743	Proteobacteria	Gammaproteobacteria	2.50328	44.8	-	LAQF01	80	-	-	4/28/15	4/28/15	Contig	Marine Biological Laboratory	SAMN03380214	GCA_000981725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/725/GCA_000981725.1_ASM98172v1	-	-
Rhizobium sp. IE4771	1301032	PRJNA230502	230502	Proteobacteria	Alphaproteobacteria	7.05741	61.0944	chromosome:NZ_CP006986.1/CP006986.1; plasmid pRetIE4771a:NZ_CP006987.1/CP006987.1; plasmid pRetIE4771b:NZ_CP006988.1/CP006988.1; plasmid pRetIE4771c:NZ_CP006989.1/CP006989.1; plasmid pRetIE4771d:NZ_CP006990.1/CP006990.1; plasmid pRetIE4771e:NZ_CP006991.1/CP006991.1	-	6	6780	6461	6/6/14	7/19/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN02423216	GCA_000698845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/845/GCA_000698845.1_ASM69884v1	-	IE4771
Syntrophomonas zehnderi OL-4	690567	PRJEB8634	282116	Terrabacteria group	Firmicutes	2.94472	44.7	-	CGIH01	53	2785	2639	4/24/15	4/17/17	Scaffold	WAGENINGEN UNIVERSITY	SAMEA3281413	GCA_000983115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/115/GCA_000983115.1_Syntrophomonas_Zehnderi_OL-4	-	OL-4
Yersinia wautersii	1341643	PRJEB3991	221824	Proteobacteria	Gammaproteobacteria	4.736	47.3	-	CBLI01	886	4603	3984	9/25/13	4/9/17	Scaffold	IP	SAMEA2272493	GCA_000493415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/415/GCA_000493415.1_1_WP-931205	-	WP-931205
Rhizobium sp. N6212	1703965	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.42441	61.0929	chromosome:NZ_CP013490.1/CP013490.1; plasmid pRspN6212a:NZ_CP013491.1/CP013491.1; plasmid pRspN6212b:NZ_CP013492.1/CP013492.1; plasmid pRspN6212c:NZ_CP013493.1/CP013493.1; plasmid pRspN6212d:NZ_CP013494.1/CP013494.1	-	5	6273	5943	6/17/16	4/12/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN03998642	GCA_001664465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/465/GCA_001664465.1_ASM166446v1	-	N6212
Rhizobium sp. N621	1703964	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.42525	61.0923	chromosome:NZ_CP013495.1/CP013495.1; plasmid pRspN621a:NZ_CP013496.1/CP013496.1; plasmid pRspN621b:NZ_CP013497.1/CP013497.1; plasmid pRspN621c:NZ_CP013498.1/CP013498.1; plasmid pRspN621d:NZ_CP013499.1/CP013499.1	-	5	6272	5941	6/17/16	4/12/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN03998641	GCA_001664325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/325/GCA_001664325.1_ASM166432v1	-	N621
Calescamantes bacterium T3.1	1643525	PRJNA280379	280379	unclassified Bacteria	Bacteria candidate phyla	1.28684	34.9	-	LBFS01	164	-	-	4/24/15	4/24/15	Scaffold	University of New Mexico	SAMN03460242	GCA_000980755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/755/GCA_000980755.1_ASM98075v1	-	-
bacterium T1.2	1643675	PRJNA280379	280379	unclassified Bacteria	unclassified Bacteria (miscellaneous)	1.24694	44.3	-	LBFQ01	72	-	-	4/24/15	4/24/15	Scaffold	University of New Mexico	SAMN03460240	GCA_000980735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/735/GCA_000980735.1_ASM98073v1	-	-
bacterium T2.1	1643676	PRJNA280379	280379	unclassified Bacteria	unclassified Bacteria (miscellaneous)	1.0923	28.7	-	LBFR01	117	-	-	4/24/15	4/24/15	Scaffold	University of New Mexico	SAMN03460241	GCA_000980765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/765/GCA_000980765.1_ASM98076v1	-	-
bacterium T1.1	1643674	PRJNA280379	280379	unclassified Bacteria	unclassified Bacteria (miscellaneous)	1.01568	44	-	LBFP01	115	-	-	4/24/15	4/24/15	Scaffold	University of New Mexico	SAMN03460239	GCA_000980745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/745/GCA_000980745.1_ASM98074v1	-	-
Agrobacterium sp. RAC06	1842536	PRJNA319838	319838	Proteobacteria	Alphaproteobacteria	4.96465	61.0784	chromosome:NZ_CP016499.1/CP016499.1; plasmid pBSY240_1:NZ_CP016500.1/CP016500.1	-	2	4735	4586	8/25/16	4/13/17	Complete Genome	Los Alamos National Laboratory	SAMN04909720	GCA_001713475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/475/GCA_001713475.1_ASM171347v1	-	RAC06
Catabacter hongkongensis	270498	PRJNA279818	279818	Terrabacteria group	Firmicutes	3.20364	48.5	-	LAYJ01	134	3055	2933	4/24/15	4/10/17	Contig	The University of Hong Kong	SAMN03450767	GCA_000981035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/035/GCA_000981035.1_ASM98103v1	25999561	HKU16
Nautella sp. ECSMB14104	1638950	PRJNA280141	280141	Proteobacteria	Alphaproteobacteria	3.90915	60	-	LAUK01	40	3678	3602	4/14/15	4/10/17	Contig	shanghai ocean university	SAMN03457166	GCA_000972285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/285/GCA_000972285.1_ASM97228v1	-	ECSMB14104
Paenibacillus algorifonticola	684063	PRJNA279343	279343	Terrabacteria group	Firmicutes	7.49564	48.4	-	LAQO01	101	6702	6390	4/15/15	4/10/17	Scaffold	Nanjing Tech University	SAMN03445852	GCA_000971975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/975/GCA_000971975.1_ASM97197v1	-	XJ259
Oceanimonas sp. GK1	511062	PRJNA68171	68171	Proteobacteria	Gammaproteobacteria	3.52724	61.0773	chromosome:NC_016745.1/CP003171.1; plasmid pOCEGK01:NC_016746.1/CP003172.1; plasmid pOCEGK02:NC_016747.1/CP003173.1	-	3	3326	3182	1/19/12	4/17/17	Complete Genome	Iranian Biological Resource Center	SAMN02603427	GCA_000243075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/075/GCA_000243075.1_ASM24307v1	22461556	GK1
Lokiarchaeum sp. GC14_75	1538547	PRJNA259156	259156	Asgard group	Candidatus Lokiarchaeota	5.14342	31.1	-	JYIM01	504	5412	5384	5/1/15	11/6/15	Contig	Uppsala University	SAMN03002197	GCA_000986845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/986/845/GCA_000986845.1_ASM98684v1	25945739	-
Clostridiales bacterium PH28_bin88	1605376	PRJNA272887	272887	Terrabacteria group	Firmicutes	4.98186	54.6	-	LAKY01	99	4777	4257	5/1/15	5/1/15	Contig	Australian Centre for Ecogenomics	SAMN03287581	GCA_000987045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/987/045/GCA_000987045.1_ASM98704v1	-	-
Candidatus Brocadia fulgida	380242	PRJNA263557	263557	PVC group	Planctomycetes	3.55294	44.9	-	LAQJ01	315	3444	3401	5/1/15	5/1/15	Contig	Radboud University Nijmegen	SAMN03103757	GCA_000987375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/987/375/GCA_000987375.1_ASM98737v1	24267221	-
Arsukibacterium sp. MJ3	1632859	PRJNA278369	278369	Proteobacteria	Gammaproteobacteria	3.74643	46.4	-	LAHP01	196	3415	3275	5/4/15	4/10/17	Contig	University of Copenhagen	SAMN03418105	GCA_000987765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/987/765/GCA_000987765.1_ASM98776v1	26044431	MJ3
Arsukibacterium ikkense	336831	PRJNA278369	278369	Proteobacteria	Gammaproteobacteria	4.12774	49.7	-	LAHO01	44	3814	3712	5/4/15	4/17/17	Contig	University of Copenhagen	SAMN03418100	GCA_000987775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/987/775/GCA_000987775.1_ASM98777v1	26044431	GCM72
Aeromonas hydrophila	644	PRJNA273636	273636	Proteobacteria	Gammaproteobacteria	5.04947	61.0666	chromosome:NZ_CP016380.1/CP016380.1; plasmid pASP-135:NZ_CP016381.1/CP016381.1	-	2	4728	4475	7/18/16	4/5/17	Complete Genome	NHGRI/NIH	SAMN03294822	GCA_001687125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/125/GCA_001687125.1_ASM168712v1	26888898	AHNIH1
Rhizobium sp. N1341	1703962	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.55556	61.051	chromosome:NZ_CP013505.1/CP013505.1; plasmid pRspN1341a:NZ_CP013506.1/CP013506.1; plasmid pRspN1341b:NZ_CP013507.1/CP013507.1; plasmid pRspN1341c:NZ_CP013508.1/CP013508.1; plasmid pRspN1341d:NZ_CP013509.1/CP013509.1; plasmid pRspN1341e:NZ_CP013510.1/CP013510.1	-	6	6427	6083	6/17/16	4/12/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN03998639	GCA_001664085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/085/GCA_001664085.1_ASM166408v1	-	N1341
Aquimarina pacifica	1296415	PRJNA232735	232735	FCB group	Bacteroidetes/Chlorobi group	5.26277	33.5	-	JACC01	145	4266	4161	1/16/14	4/9/17	Contig	ocean university of China	SAMN02597432	GCA_000520955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/955/GCA_000520955.1_of_Aquimarina_pacifica	24626966	SW150
Rhizobium etli CFN 42	347834	PRJNA13932	13932	Proteobacteria	Alphaproteobacteria	6.53023	61.0458	chromosome:NC_007761.1/CP000133.1; plasmid p42a:NC_007762.1/CP000134.1; plasmid p42b:NC_007763.1/CP000135.1; plasmid p42c:NC_007764.1/CP000136.1; plasmid p42e:NC_007765.1/CP000137.1; plasmid p42f:NC_007766.1/CP000138.1; plasmid symbiotic plasmid p42d:NC_004041.2/U80928.5	-	7	6435	5992	2/1/06	5/19/17	Complete Genome	"Centro de Ciencias Genomicas, Universidad Nacional Autonoma de Mexico"	SAMN02603106	GCA_000092045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/045/GCA_000092045.1_ASM9204v1	16505379	CFN 42
Caballeronia jiangsuensis	1458357	PRJNA238425	238425	Proteobacteria	Betaproteobacteria	8.61105	62.6	-	JFHF01	168	7969	7675	4/29/14	4/9/17	Contig	Laboratory of Biocatalysis and Synthetic Biotechnology	SAMN02671694	GCA_000648925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/925/GCA_000648925.1_SOAPdenovo_v1.05	24855293	MP-1
Geobacter soli	1510391	PRJNA271628	271628	Proteobacteria	delta/epsilon subdivisions	3.65721	61.8	-	JXBL01	8	3386	3257	1/8/15	4/10/17	Scaffold	Guangdong Institute of Eco-Environmental and Soil Sciences	SAMN03275688	GCA_000816575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/575/GCA_000816575.1_ASM81657v1	26634019	GSS01
Serratia ureilytica	300181	PRJNA260750	260750	Proteobacteria	Gammaproteobacteria	5.39136	59.2	-	JSFB01	1	5170	4980	5/5/15	4/17/17	Contig	Los Alamos National Laboratory	SAMN03025787	GCA_000988045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/045/GCA_000988045.1_GFC_24	-	Lr5/4
Bacillus ligniniphilus	1134413	PRJNA182346	182346	Terrabacteria group	Firmicutes	3.85625	40.8	-	ANNK01	196	3934	3689	1/28/13	4/8/17	Contig	Jiangsu University	SAMN02470111	GCA_000334155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/155/GCA_000334155.1_L1	23516185	L1
Natrialba magadii ATCC 43099	547559	PRJNA30691	30691	Euryarchaeota	Halobacteria	4.44364	61.032	chromosome:NC_013922.1/CP001932.1; plasmid pNMAG01:NC_013923.1/CP001933.1; plasmid pNMAG02:NC_013924.1/CP001934.1; plasmid pNMAG03:NC_013925.1/CP001935.1	-	4	4217	4076	2/24/10	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598473	GCA_000025625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/625/GCA_000025625.1_ASM2562v1	22559199	ATCC 43099
Sulfitobacter geojensis	1342299	PRJNA233442	233442	Proteobacteria	Alphaproteobacteria	4.22947	57.8	-	JASE01	5	4044	3940	4/8/14	4/9/17	Contig	Yonsei University	SAMN02721582	GCA_000622325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/325/GCA_000622325.1_MM124_draft	-	MM-124
Sulfitobacter noctilucae	1342302	PRJNA233440	233440	Proteobacteria	Alphaproteobacteria	3.91454	58.3	-	JASC01	14	3753	3650	4/8/14	4/9/17	Contig	Yonsei University	SAMN02721580	GCA_000622365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/365/GCA_000622365.1_NB68_draft	25122614	NB-68
Sulfitobacter noctilucicola	1342301	PRJNA233441	233441	Proteobacteria	Alphaproteobacteria	4.08598	57.1	-	JASD01	8	3988	3887	4/8/14	4/9/17	Contig	Yonsei University	SAMN02721583	GCA_000622385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/385/GCA_000622385.1_NB77_draft	25122614	NB-77
Thermogemmatispora carboxidivorans	1382306	PRJNA214300	214300	Terrabacteria group	Chloroflexi	5.60796	60.9	-	JNIM01	1	4428	4341	6/11/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02841144	GCA_000702505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/505/GCA_000702505.1_ASM70250v1	-	PM5
Streptomyces europaeiscabiei	146819	PRJNA255689	255689	Terrabacteria group	Actinobacteria	8.62493	71.7	-	JPPV01	33	7597	7266	7/30/15	3/11/17	Scaffold	University of Exeter	SAMN02927995	GCA_001189025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/025/GCA_001189025.1_ASM118902v1	-	NCPPB 4064
Rhizobium etli	29449	PRJNA383588	383588	Proteobacteria	Alphaproteobacteria	6.75685	61.0228	chromosome:NZ_CP020906.1/CP020906.1; plasmid pRetNXC12a:NZ_CP020907.1/CP020907.1; plasmid pRetNXC12b:NZ_CP020908.1/CP020908.1; plasmid pRetNXC12c:NZ_CP020909.1/CP020909.1; plasmid pRetNXC12d:NZ_CP020910.1/CP020910.1; plasmid pRetNXC12e:NZ_CP020911.1/CP020911.1	-	6	6583	6141	5/9/17	5/22/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN06767430	GCA_002119845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/845/GCA_002119845.1_ASM211984v1	-	NXC12
candidate division TM6 bacterium GW2011_GWF2_30_66	1619078	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.1137	30.5	-	LBOA01	53	934	932	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319241	GCA_000989195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/195/GCA_000989195.1_ASM98919v1	-	-
Rhizobium leguminosarum bv. trifolii CB782	1033991	PRJNA67103	67103	Proteobacteria	Alphaproteobacteria	6.70365	61.0123	chromosome:NZ_CP007067.1/CP007067.1; plasmid unnamed:NZ_CP007068.1/CP007068.1; plasmid unnamed2:NZ_CP007069.1/CP007069.1; plasmid unnamed3:NZ_CP007070.1/CP007070.1	-	4	6523	6196	1/16/14	4/2/17	Complete Genome	DOE Joint Genome Institute	SAMN02769652	GCA_000520875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/875/GCA_000520875.1_ASM52087v1	-	CB782
Hymenobacter sedentarius	1411621	PRJNA305453	305453	FCB group	Bacteroidetes/Chlorobi group	4.86885	61	chromosome:NZ_CP013909.1/CP013909.1	-	1	4010	3894	1/8/16	4/18/17	Complete Genome	Seoul Women's University	SAMN04325376	GCA_001507645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/645/GCA_001507645.1_ASM150764v1	-	DG5B
Campylobacter corcagiensis	1448857	PRJNA238449	238449	Proteobacteria	delta/epsilon subdivisions	1.67318	31.9	-	JFAP01	21	1737	1657	3/18/14	4/9/17	Contig	Cork Institute Of Technology	SAMN02645564	GCA_000597805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/805/GCA_000597805.1_Ccorc1.0	24744327	CIT 045
Salinicoccus sp. YB14-2	1572701	PRJNA287511	287511	Terrabacteria group	Firmicutes	2.73065	41.9	-	LFKO01	11	2741	2596	8/11/15	4/10/17	Scaffold	Laboratory of Extremophiles	SAMN03782926	GCA_001265075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/075/GCA_001265075.1_ASM126507v1	-	YB14-2
Mycobacterium elephantis	81858	PRJNA282888	282888	Terrabacteria group	Actinobacteria	5.18762	67.8	-	LBNO01	234	5072	4768	5/8/15	4/17/17	Contig	UCSF	SAMN03580702	GCA_001005175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/175/GCA_001005175.1_ASM100517v1	26112791	Lipa
Gluconobacter oxydans DSM 3504	1288313	PRJNA188081	188081	Proteobacteria	Alphaproteobacteria	2.88244	61	chromosome:NZ_CP004373.1/CP004373.1	-	1	2590	2491	3/3/14	4/2/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05771126	GCA_000583855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/855/GCA_000583855.1_ASM58385v1	25267158	DSM 3504
Kordia jejudonensis	1348245	PRJNA282340	282340	FCB group	Bacteroidetes/Chlorobi group	5.35647	34	-	LBMG01	217	4630	4495	5/8/15	4/10/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN03568761	GCA_001005315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/315/GCA_001005315.1_ASM100531v1	26297493	SSK3-3
Geobacter sulfurreducens KN400	663917	PRJNA39745	39745	Proteobacteria	delta/epsilon subdivisions	3.71427	61	chromosome:NC_017454.1/CP002031.1	-	1	3389	3298	6/17/10	4/7/17	Complete Genome	"University of Massachusetts, Amherst"	SAMN02604215	GCA_000210155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/155/GCA_000210155.1_ASM21015v1	"2,054,401,922,967,210"	KN400
Aquimarina atlantica	1317122	PRJNA196739	196739	FCB group	Bacteroidetes/Chlorobi group	5.68799	33	-	AQRA01	39	4924	4801	4/11/14	4/9/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02951911	GCA_000626715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/715/GCA_000626715.1_SOAPdenovo_v1.05	-	22II-S11-z7
Psychroserpens jangbogonensis	1484460	PRJNA255842	255842	FCB group	Bacteroidetes/Chlorobi group	3.63354	32.7	-	JSWG01	62	3216	3156	12/4/14	4/9/17	Contig	KORIA POLAR RESEARCH INSTITUTE	SAMN02929382	GCA_000797465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/465/GCA_000797465.1_ASM79746v1	25316694	PAMC 27130
Silvibacterium bohemicum	1577686	PRJNA281745	281745	Acidobacteria	Acidobacteriia	6.45912	58.2	-	LBHJ01	25	5323	5195	5/13/15	4/10/17	Scaffold	Institute of Microbiology of the AS CR	SAMN03495983	GCA_001006305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/305/GCA_001006305.1_ASM100630v1	-	S15
Rhizobium leguminosarum bv. viciae	387	PRJNA395793	395793	Proteobacteria	Alphaproteobacteria	6.95763	60.9858	chromosome:NZ_CP022564.1/CP022564.1; plasmid pSK01:NZ_CP022565.1/CP022565.1; plasmid pSK02:NZ_CP022566.1/CP022566.1; plasmid pSK03:NZ_CP022567.1/CP022567.1; plasmid pSK04:NZ_CP022568.1/CP022568.1; plasmid pSK05:NZ_CP022569.1/CP022569.1; plasmid pSK06:NZ_CP022570.1/CP022570.1	-	7	6848	6456	8/2/17	8/4/17	Complete Genome	CSIR-Institute of Himalayan Bioresource Technology	SAMN04849238	GCA_002240185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/185/GCA_002240185.1_ASM224018v1	-	BIHB 1148
Acidithiobacillus caldus SM-1	990288	PRJNA63223	63223	Proteobacteria	Acidithiobacillia	3.2376	60.938	chromosome:NC_015850.1/CP002573.1; plasmid megaplasmid:NC_015851.1/CP002574.1; plasmid pLAtc1:NC_015852.1/CP002575.1; plasmid pLAtc2:NC_015853.1/CP002576.1; plasmid pLAtc3:NC_015854.1/CP002577.1	-	5	3254	3106	7/20/11	4/10/17	Complete Genome	Environmental Microbiology Research Center (EMRC)	SAMN02603220	GCA_000221025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/025/GCA_000221025.1_ASM22102v1	21703548	SM-1
Rhizobium leguminosarum bv. trifolii WSM1689	754523	PRJNA62289	62289	Proteobacteria	Alphaproteobacteria	6.90338	60.9297	chromosome:NZ_CP007045.1/CP007045.1; plasmid unnamed:NZ_CP007046.1/CP007046.1; plasmid unnamed2:NZ_CP007047.1/CP007047.1; plasmid unnamed3:NZ_CP007048.1/CP007048.1; plasmid unnamed4:NZ_CP007049.1/CP007049.1; plasmid unnamed5:NZ_CP007050.1/CP007050.1	-	6	6760	6429	1/13/14	4/2/17	Complete Genome	DOE Joint Genome Institute	SAMN02769650	GCA_000517605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/605/GCA_000517605.1_ASM51760v1	-	WSM1689
Rhodoferax saidenbachensis	1484693	PRJNA361194	361194	Proteobacteria	Betaproteobacteria	4.26485	60.9	chromosome:NZ_CP019239.1/CP019239.1	-	1	4030	3949	1/18/17	4/17/17	Complete Genome	Korea University	SAMN06130150	GCA_001955715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/715/GCA_001955715.1_ASM195571v1	-	DSM 22694
Corynebacterium aquilae DSM 44791	1431546	PRJNA230273	230273	Terrabacteria group	Actinobacteria	2.92644	60.9	chromosome:NZ_CP009245.1/CP009245.1	-	1	2463	2373	1/10/17	4/17/17	Complete Genome	Bielefeld University	SAMN02996496	GCA_001941445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/445/GCA_001941445.1_ASM194144v1	-	S-613
Pseudomonas brassicacearum	930166	PRJNA311625	311625	Proteobacteria	Gammaproteobacteria	6.71591	60.9	chromosome:NZ_CP014693.1/CP014693.1	-	1	6046	5870	9/26/16	4/5/17	Complete Genome	Graz University of Technology	SAMN04486788	GCA_001746815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/815/GCA_001746815.1_ASM174681v1	-	L13-6-12
Flavonifractor plautii	292800	PRJNA317592	317592	Terrabacteria group	Firmicutes	3.81848	60.9	chromosome:NZ_CP015406.2/CP015406.2	-	1	3738	3592	7/20/16	4/17/17	Complete Genome	University of Bern	SAMN04621620	GCA_001688625.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/625/GCA_001688625.2_ASM168862v2	-	YL31
Luteibacter rhizovicinus DSM 16549	1440763	PRJNA232370	232370	Proteobacteria	Gammaproteobacteria	4.52301	64.5	-	JPLB01	269	4130	4005	5/19/15	4/18/17	Contig	McMaster University	SAMN02894430	GCA_001010405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/405/GCA_001010405.1_ASM101040v1	25481407	DSM 16549
Xanthomonas pisi DSM 18956	1440766	PRJNA232379	232379	Proteobacteria	Gammaproteobacteria	4.25348	64.7	-	JPLE01	345	3625	3369	5/19/15	4/17/17	Contig	McMaster University	SAMN02894433	GCA_001010415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/415/GCA_001010415.1_ASM101041v1	25481407	DSM 18956
Xanthomonas hyacinthi DSM 19077	1440765	PRJNA232378	232378	Proteobacteria	Gammaproteobacteria	8.85239	66.3	-	JPLD01	1415	7455	7211	5/19/15	5/19/15	Contig	McMaster University	SAMN02894432	GCA_001010435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/435/GCA_001010435.1_ASM101043v1	25481407	DSM 19077
Methanoculleus bourgensis	83986	PRJEB13327	320698	Euryarchaeota	Methanomicrobia	2.55119	60.9	chromosome I:NZ_LT549891.1/LT549891.1	-	1	2519	2393	5/5/16	4/12/17	Complete Genome	CEBITEC	SAMEA3921042	GCA_900079125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/125/GCA_900079125.1_MBBA	-	-
Streptomyces stelliscabiei	146820	PRJNA255693	255693	Terrabacteria group	Actinobacteria	10.4191	71.1	-	JPPZ01	42	9271	8396	7/30/15	3/11/17	Scaffold	University of Exeter	SAMN02927999	GCA_001189035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/035/GCA_001189035.1_ASM118903v1	-	P3825
Desulfovibrio fairfieldensis	44742	PRJNA282954	282954	Proteobacteria	delta/epsilon subdivisions	3.69931	60.9	chromosome:NZ_CP014229.1/CP014229.1	-	1	3222	3093	2/9/16	4/16/17	Complete Genome	The Forsyth Institute	SAMN04435860	GCA_001553605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/605/GCA_001553605.1_ASM155360v1	-	CCUG 45958
Aeromonas hydrophila J-1	1419584	PRJNA227242	227242	Proteobacteria	Gammaproteobacteria	5.00081	60.9	chromosome:NZ_CP006883.1/CP006883.1	-	1	4616	4369	1/16/15	4/2/17	Complete Genome	Nanjing Agricultural University	SAMN03283200	GCA_000819505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/505/GCA_000819505.1_ASM81950v1	-	J-1
Spirochaeta thermophila DSM 6578	869211	PRJNA50823	50823	Spirochaetes	Spirochaetia	2.56022	60.9	chromosome:NC_017583.1/CP002903.1	-	1	2350	2239	7/6/11	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00191235	GCA_000184345.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/184/345/GCA_000184345.2_ASM18434v2	-	DSM 6578
Geobacter sulfurreducens PCA	243231	PRJNA192	192	Proteobacteria	delta/epsilon subdivisions	3.81413	60.9	chromosome:NC_002939.5/AE017180.2	-	1	3711	3430	2/14/02	8/3/16	Complete Genome	TIGR	SAMN02603989	GCA_000007985.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/985/GCA_000007985.2_ASM798v2	14671304	PCA
Mycobacterium senegalense	1796	PRJNA284213	284213	Terrabacteria group	Actinobacteria	6.73855	66.4	-	LDCO01	112	6581	6339	5/22/15	4/10/17	Contig	UCSF	SAMN03699825	GCA_001012795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/795/GCA_001012795.1_ASM101279v1	-	CK1
Hymenobacter sp. PAMC 26554	1484116	PRJNA314934	314934	FCB group	Bacteroidetes/Chlorobi group	5.45125	60.8976	chromosome:NZ_CP014771.1/CP014771.1; plasmid unnamed1:NZ_CP014769.1/CP014769.1; plasmid unnamed2:NZ_CP014770.1/CP014770.1	-	3	4735	4577	3/22/16	4/12/17	Complete Genome	Korea Polar Research Institute	SAMN04545526	GCA_001596155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/155/GCA_001596155.1_ASM159615v1	-	PAMC 26554
Erythrobacter marinus	874156	PRJNA280970	280970	Proteobacteria	Alphaproteobacteria	2.8359	59.1	-	LDCP01	5	2713	2646	6/8/15	4/10/17	Contig	"Second Institute of Oceanography, State Oceanic Administration"	SAMN03656146	GCA_001021555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/555/GCA_001021555.1_ASM102155v1	-	KCTC 23554
Methyloversatilis discipulorum	1119528	PRJNA159997	159997	Proteobacteria	Betaproteobacteria	4.30653	66.6	-	AZUP01	1	3978	3899	1/3/14	6/20/17	Contig	JGI	SAMN02597194	GCA_000527135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/135/GCA_000527135.1_ASM52713v1	-	FAM1
Methyloversatilis thermotolerans	1346290	PRJNA165591	165591	Proteobacteria	Betaproteobacteria	4.16131	65.6	-	ARCV01	4	3772	3670	4/19/13	6/20/17	Scaffold	DOE Joint Genome Institute	SAMN02256467	GCA_000372885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/885/GCA_000372885.1_ASM37288v1	-	3t
Rhizobium sp. NXC14	1981173	PRJNA383589	383589	Proteobacteria	Alphaproteobacteria	6.68632	60.8747	chromosome:NZ_CP021030.1/CP021030.1; plasmid pRspNXC14a:NZ_CP021031.1/CP021031.1; plasmid pRspNXC14b:NZ_CP021032.1/CP021032.1; plasmid pRspNXC14c:NZ_CP021033.1/CP021033.1	-	4	6448	6053	5/2/17	5/6/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN06767451	GCA_002117485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/485/GCA_002117485.1_ASM211748v1	-	NXC14
Aneurinibacillus tyrosinisolvens	1443435	PRJDB3821	281717	Terrabacteria group	Firmicutes	5.69382	44.5	-	BBWZ01	136	5850	5354	4/18/15	4/10/17	Contig	Japan Agency for Marine-Earth Science and Technology	SAMD00028761	GCA_001015055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/055/GCA_001015055.1_ASM101505v1	26021921	LL-002
Bacilli bacterium VT-13-104	1637974	PRJNA279446	279446	Terrabacteria group	Firmicutes	3.565	35.7	-	LAZH01	80	3529	3358	4/21/15	4/18/17	Scaffold	Institute of Human Microbiology	SAMN03447960	GCA_000974285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/285/GCA_000974285.1_ASM97428v1	26139715	VT-13-104
Microvirga vignae	1225564	PRJNA283551	283551	Proteobacteria	Alphaproteobacteria	6.47244	61.1	-	LCYG01	165	6376	5928	6/1/15	4/17/17	Scaffold	Embrapa Agrobiologia	SAMN03652542	GCA_001017175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/175/GCA_001017175.1_ASM101717v1	26159523	BR3299
Rhizobium leguminosarum bv. viciae 3841	216596	PRJNA344	344	Proteobacteria	Alphaproteobacteria	7.75131	60.8668	chromosome:NC_008380.1/AM236080.1; plasmid pRL10:NC_008381.1/AM236084.1; plasmid pRL11:NC_008384.1/AM236085.1; plasmid pRL12:NC_008378.1/AM236086.1; plasmid pRL7:NC_008382.1/AM236081.1; plasmid pRL8:NC_008383.1/AM236082.1; plasmid pRL9:NC_008379.1/AM236083.1	-	7	7600	7219	5/4/06	5/28/17	Complete Genome	Sanger Institute	SAMEA1705944	GCA_000009265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/265/GCA_000009265.1_ASM926v1	16640791	3841
Mycoplasmataceae bacterium CE_OT135	1525752	PRJNA255995	255995	Terrabacteria group	Tenericutes	0.662952	34.3	-	JPXH01	67	1113	1078	6/2/15	6/2/15	Contig	Cornell University	SAMN02934550	GCA_001017675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/675/GCA_001017675.1_ASM101767v1	25964324	-
Mycoplasmataceae bacterium RC_NB112A	1524337	PRJNA255736	255736	Terrabacteria group	Tenericutes	0.739936	32.1	-	JPXG01	34	1056	1030	6/2/15	6/2/15	Contig	Cornell University	SAMN02928331	GCA_001017705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/705/GCA_001017705.1_ASM101770v1	25964324	-
Mycoplasmataceae bacterium RV_VA103A	1528105	PRJNA256996	256996	Terrabacteria group	Tenericutes	1.22795	33.6	-	JQIB01	99	1871	1839	6/2/15	6/2/15	Contig	Cornell University	SAMN03003637	GCA_001017685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/685/GCA_001017685.1_ASM101768v1	25964324	-
Halostagnicola larsenii XH-48	797299	PRJNA71415	71415	Euryarchaeota	Halobacteria	4.13118	60.8653	chromosome:NZ_CP007055.1/CP007055.1; plasmid unnamed:NZ_CP007056.1/CP007056.1; plasmid unnamed2:NZ_CP007057.1/CP007057.1; plasmid unnamed3:NZ_CP007058.1/CP007058.1; plasmid unnamed4:NZ_CP007059.1/CP007059.1	-	5	4023	3858	1/13/14	4/18/17	Complete Genome	JGI	SAMN00117518	GCA_000517625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/625/GCA_000517625.1_ASM51762v1	-	XH-48
Roseovarius mucosus	215743	PRJNA380207	380207	Proteobacteria	Alphaproteobacteria	4.38143	60.8491	chromosome:NZ_CP020474.1/CP020474.1; plasmid pSMR3-1:NZ_CP020475.1/CP020475.1; plasmid pSMR3-2:NZ_CP020476.1/CP020476.1	-	3	4200	4116	4/6/17	5/31/17	Complete Genome	University of Gothenburg	SAMN06564448	GCA_002080415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/415/GCA_002080415.1_ASM208041v1	-	SMR3
Delftia lacustris	558537	PRJNA248702	248702	Proteobacteria	Betaproteobacteria	6.97864	66.3	-	JNCQ01	210	6388	6152	6/2/15	4/10/17	Contig	Lanzhou University	SAMN02800873	GCA_001017795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/795/GCA_001017795.1_ASM101779v1	26589947	LZ-C
Cellulosimicrobium funkei	264251	PRJNA247930	247930	Terrabacteria group	Actinobacteria	4.65873	74.2	-	JNBQ01	85	4144	3931	6/3/15	4/10/17	Contig	Oil Crops Research Institute of Chinese Academy of Agricultural Sciences	SAMN02781380	GCA_001019615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/615/GCA_001019615.1_ASM101961v1	-	U11
Aeromonas lacus	558884	PRJNA260478	260478	Proteobacteria	Gammaproteobacteria	4.39437	59	-	JRGM01	196	4022	3863	10/8/14	4/17/17	Contig	Auburn University	SAMN03023876	GCA_000764665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/665/GCA_000764665.1_ASM76466v1	"2,541,450,025,852,020"	AE122
Burkholderia sp. OLGA172	1804984	PRJNA312505	312505	Proteobacteria	Betaproteobacteria	8.57489	60.8474	chromosome 1:NZ_CP014578.1/CP014578.1; chromosome 2:NZ_CP014579.1/CP014579.1; plasmid pOLGA1:NZ_CP014580.1/CP014580.1; plasmid pOLGA2:NZ_CP014581.1/CP014581.1; plasmid pOLGA3:NZ_CP014582.1/CP014582.1	-	5	7789	7288	4/29/16	4/12/17	Complete Genome	University of Toronto Scarborough	SAMN04498477	GCA_001634365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/365/GCA_001634365.1_ASM163436v1	27063562	OLGA172
Desulfonatronovibrio magnus	698827	PRJNA262433	262433	Proteobacteria	delta/epsilon subdivisions	4.80966	44.9	-	JYNP01	134	4455	4180	2/26/15	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN03351824	GCA_000934755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/755/GCA_000934755.1_ASM93475v1	-	AHT22
Moellerella wisconsensis ATCC 35017	1354267	PRJNA210918	210918	Proteobacteria	Gammaproteobacteria	3.30317	39.9	-	LGAA01	108	2896	2754	9/18/15	4/11/17	Contig	UW-GEL (University of Wisconsin - Genome Evolution Laboratory)	SAMN03842016	GCA_001294465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/465/GCA_001294465.1_Mwi35017_DRAFTv2	-	ATCC 35017
Maribacter thermophilus	1197874	PRJNA283478	283478	FCB group	Bacteroidetes/Chlorobi group	4.05061	38.9	-	LDAS01	2	3520	3446	6/5/15	4/17/17	Scaffold	Zhejiang University	SAMN03651237	GCA_001020565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/565/GCA_001020565.1_ASM102056v1	-	HT7-2
Gluconobacter oxydans 621H	290633	PRJNA13325	13325	Proteobacteria	Alphaproteobacteria	2.92238	60.8415	chromosome:NC_006677.1/CP000009.1; plasmid pGOX1:NC_006672.1/CP000004.1; plasmid pGOX2:NC_006673.1/CP000005.1; plasmid pGOX3:NC_006674.1/CP000006.1; plasmid pGOX4:NC_006675.1/CP000007.1; plasmid pGOX5:NC_006676.1/CP000008.1	-	6	2836	2607	1/21/05	3/29/17	Complete Genome	Gottingen Genomics Laboratory	SAMN02603293	GCA_000011685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/685/GCA_000011685.1_ASM1168v1	15665824	621H
Rhizobium etli bv. mimosae str. Mim1	1328306	PRJNA200310	200310	Proteobacteria	Alphaproteobacteria	7.198	60.8214	chromosome:NC_021905.1/CP005950.1; plasmid pRetMIM1a:NC_021906.1/CP005951.1; plasmid pRetMIM1b:NC_021907.1/CP005952.1; plasmid pRetMIM1d:NC_021908.1/CP005954.1; plasmid pRetMIM1e:NC_021909.1/CP005955.1; plasmid pRetMIM1f:NC_021911.1/CP005956.1; plasmid pRetNIM1c:NC_021910.1/CP005953.1	-	7	6947	6515	7/31/13	4/1/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN02603105	GCA_000442435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/435/GCA_000442435.1_ASM44243v1	-	Mim1
Pseudomonas fluorescens	294	PRJNA320923	320923	Proteobacteria	Gammaproteobacteria	6.64114	60.8	chromosome:NZ_CP015637.1/CP015637.1	-	1	6050	5872	8/23/16	4/5/17	Complete Genome	Institute of Technology Carlow	SAMN04992557	GCA_001708445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/445/GCA_001708445.1_ASM170844v1	-	L321
Pseudomonas fluorescens	294	PRJNA320923	320923	Proteobacteria	Gammaproteobacteria	6.60661	60.8	chromosome:NZ_CP015638.1/CP015638.1	-	1	6008	5833	8/23/16	4/5/17	Complete Genome	Institute of Technology Carlow	SAMN04992704	GCA_001708465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/465/GCA_001708465.1_ASM170846v1	-	L111
Aeromonas hydrophila	644	PRJNA323754	323754	Proteobacteria	Gammaproteobacteria	4.95176	60.8	chromosome:NZ_CP016392.1/CP016392.1	-	1	4534	4306	7/11/16	4/5/17	Complete Genome	Chinese Academy of Fishery Sciences	SAMN05188441	GCA_001683535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/535/GCA_001683535.1_ASM168353v1	-	GYK1
Pseudomonas brassicacearum	930166	PRJNA292573	292573	Proteobacteria	Gammaproteobacteria	6.97676	60.8	chromosome:NZ_CP012680.1/CP012680.1	-	1	6308	6095	11/30/15	4/4/17	Complete Genome	Universite de Moncton	SAMN03981709	GCA_001449085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/085/GCA_001449085.1_ASM144908v1	26823582	LBUM300
Mycobacterium heraklionense	512402	PRJNA305922	305922	Terrabacteria group	Actinobacteria	4.86077	67.4	-	LZIU01	206	4607	4323	6/17/16	4/13/17	Contig	JCVI	SAMN04634209	GCA_001666995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/995/GCA_001666995.1_ASM166699v1	-	E2853
Herbaspirillum hiltneri N3	1262470	PRJNA182106	182106	Proteobacteria	Betaproteobacteria	4.96547	60.8	chromosome:NZ_CP011409.1/CP011409.1	-	1	4551	4413	8/17/15	4/16/17	Complete Genome	Universidade Federal do Parana	SAMN03010392	GCA_001267925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/925/GCA_001267925.1_ASM126792v1	26514770	N3
Diaphorobacter sp. J5-51	680496	PRJNA266489	266489	Proteobacteria	Betaproteobacteria	3.79415	66.2	-	JSYI01	141	3567	3369	6/9/15	4/17/17	Contig	Peking University	SAMN03165360	GCA_001023515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/515/GCA_001023515.1_ASM102351v1	-	J5-51
Fimbriimonas ginsengisoli Gsoil 348	661478	PRJNA234472	234472	Terrabacteria group	Armatimonadetes	5.23176	60.8	chromosome:NZ_CP007139.1/CP007139.1	-	1	4737	4642	7/10/14	4/17/17	Complete Genome	"Department of Microbiology and Microbial Engineering, School of Life Sciences, Fudan University"	SAMN02641501	GCA_000724625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/625/GCA_000724625.1_ASM72462v1	24967843	Gsoil 348
Actinobacteria bacterium IMCC26207	1641811	PRJNA281022	281022	Terrabacteria group	Actinobacteria	3.3168	57.3	-	LCZK01	10	3005	2914	6/10/15	4/10/17	Contig	Inha University	SAMN03480620	GCA_001025035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/035/GCA_001025035.1_ASM102503v1	-	IMCC26207
Kiloniella spongiae	1489064	PRJNA279544	279544	Proteobacteria	Alphaproteobacteria	4.47531	45	-	LAQL01	77	4164	4088	6/5/15	4/10/17	Contig	The Third Institute of State Oceanic Administration	SAMN03449751	GCA_001026905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/905/GCA_001026905.1_ASM102690v1	26386704	MEBiC09566
Aeromonas hydrophila pc104A	1418107	PRJNA227038	227038	Proteobacteria	Gammaproteobacteria	5.02383	60.8	chromosome:NZ_CP007576.1/CP007576.1	-	1	4648	4407	4/22/14	4/2/17	Complete Genome	"USDA, ARS, AAHRU"	SAMN02728499	GCA_000635955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/955/GCA_000635955.1_ASM63595v1	24903879	pc104A
Streptomyces incarnatus	665007	PRJNA284179	284179	Terrabacteria group	Actinobacteria	8.89747	71.6041	chromosome:CP011497.1; plasmid unnamed_1:CP011498.1; plasmid unnamed_2:CP011499.1; plasmid unnamed_3:CP011500.1	-	4	7936	7429	6/3/15	7/14/15	Chromosome	Okayama University	SAMN03699512	GCA_001027185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/185/GCA_001027185.1_ASM102718v1	-	NRRL 8089
Aeromonas hydrophila AL09-71	1418110	PRJNA227037	227037	Proteobacteria	Gammaproteobacteria	5.02386	60.8	chromosome:NZ_CP007566.1/CP007566.1	-	1	4649	4407	4/18/14	4/2/17	Complete Genome	"usda, ars, aahru"	SAMN02726090	GCA_000633175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/175/GCA_000633175.1_ASM63317v1	24855300	AL09-71
Aeromonas hydrophila ML09-119	1288394	PRJNA188141	188141	Proteobacteria	Gammaproteobacteria	5.0245	60.8	chromosome:NC_021290.1/CP005966.1	-	1	4646	4415	5/24/13	4/1/17	Complete Genome	Mississippi State University	SAMN02603614	GCA_000401555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/555/GCA_000401555.1_ASM40155v1	24051325	ML09-119
Tenacibaculum mesophilum	104268	PRJEB18199	355474	FCB group	Bacteroidetes/Chlorobi group	3.28662	31.6	-	FQVV01	14	3002	2926	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444344	GCA_900129475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/475/GCA_900129475.1_IMG-taxon_2695420951_annotated_assembly	-	DSM 13764
Pseudomonas poae RE*1-1-14	1282356	PRJNA186492	186492	Proteobacteria	Gammaproteobacteria	5.51224	60.8	chromosome:NC_020209.1/CP004045.1	-	1	4933	4745	2/4/13	5/19/17	Complete Genome	Graz University of Technology	SAMN02603296	GCA_000336465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/465/GCA_000336465.1_ASM33646v1	-	RE*1-1-14
Peptococcaceae bacterium 1109	1655638	PRJNA283204	283204	Terrabacteria group	Firmicutes	2.70175	54.3	-	LDJB01	11	2572	2294	6/16/15	10/20/15	Contig	Agriculture and Agri-Food Canada	SAMN03659008	GCA_001028815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/815/GCA_001028815.1_ASM102881v1	26481626	-
Pseudomonas fluorescens F113	1114970	PRJNA76715	76715	Proteobacteria	Gammaproteobacteria	6.84583	60.8	chromosome:NC_016830.1/CP003150.1	-	1	6169	5946	12/9/11	5/19/17	Complete Genome	Universidad Autónoma de Madrid	SAMN02604099	GCA_000237065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/065/GCA_000237065.1_ASM23706v1	22328765	F113
Pseudomonas brassicacearum subsp. brassicacearum NFM421	994484	PRJEA63495	63495	Proteobacteria	Gammaproteobacteria	6.84325	60.8	chromosome:NC_015379.1/CP002585.1	-	1	6209	6009	4/1/11	5/19/17	Complete Genome	CEA/DSV/IBeB/SBVME/LEMIRE	SAMN02603052	GCA_000194805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/805/GCA_000194805.1_ASM19480v1	21515771	NFM421
Peptococcaceae bacterium CEB3	999898	PRJNA285482	285482	Terrabacteria group	Firmicutes	5.3063	52.6	-	LDXJ01	64	5061	4798	6/17/15	4/17/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03754344	GCA_001029295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/295/GCA_001029295.1_ASM102929v1	26251503	CEB3
Desulfosporosinus acididurans	476652	PRJNA285484	285484	Terrabacteria group	Firmicutes	4.63787	41.8	-	LDZY01	47	4456	4183	6/17/15	4/17/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03754342	GCA_001029285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/285/GCA_001029285.1_ASM102928v1	26251501	M1
Photobacterium aquae	1195763	PRJNA242743	242743	Proteobacteria	Gammaproteobacteria	5.07873	49.1	-	LDOT01	112	4617	4450	6/18/15	4/17/17	Contig	Technical University of Denmark	SAMN03702590	GCA_001029445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/445/GCA_001029445.1_ASM102944v1	-	CGMCC 1.12159
Photobacterium ganghwense	320778	PRJNA242743	242743	Proteobacteria	Gammaproteobacteria	5.53693	50.5	-	LDOU01	120	4955	4784	6/18/15	4/17/17	Contig	Technical University of Denmark	SAMN03702592	GCA_001029455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/455/GCA_001029455.1_ASM102945v1	-	DSM 22954
Thermus tengchongensis YIM 77401	1449357	PRJNA234779	234779	Terrabacteria group	Deinococcus-Thermus	2.56231	66.4	-	JQLK01	5	2741	2506	8/28/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02745444	GCA_000744175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/175/GCA_000744175.1_ASM74417v1	27125486	YIM 77401
Rubrobacter aplysinae	909625	PRJNA284660	284660	Terrabacteria group	Actinobacteria	3.18746	65.1	-	LEKH01	33	3119	3013	6/18/15	4/17/17	Scaffold	University of Wuerzburg	SAMN03729479	GCA_001029505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/505/GCA_001029505.1_ASM102950v1	26430030	RV113
Hyphomicrobium denitrificans ATCC 51888	582899	PRJNA33261	33261	Proteobacteria	Alphaproteobacteria	3.63897	60.8	chromosome:NC_014313.1/CP002083.1	-	1	3542	3473	6/25/10	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598499	GCA_000143145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/143/145/GCA_000143145.1_ASM14314v1	-	ATCC 51888
Candidatus Desulforudis audaxviator MP104C	477974	PRJNA21047	21047	Terrabacteria group	Firmicutes	2.34948	60.8	chromosome:NC_010424.1/CP000860.1	-	1	2313	2220	3/6/08	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598442	GCA_000018425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/425/GCA_000018425.1_ASM1842v1	18845759	MP104C
Synechococcus sp. RCC307	316278	PRJNA13654	13654	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.22491	60.8	chromosome:NC_009482.1/CT978603.1	-	1	2457	2388	5/19/07	4/17/17	Complete Genome	Genoscope	SAMEA3138265	GCA_000063525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/063/525/GCA_000063525.1_ASM6352v1	-	-
Rhizobium leguminosarum bv. trifolii WSM1325	395491	PRJNA20097	20097	Proteobacteria	Alphaproteobacteria	7.41812	60.7836	chromosome:NC_012850.1/CP001622.1; plasmid pR132501:NC_012848.1/CP001623.1; plasmid pR132502:NC_012858.1/CP001624.1; plasmid pR132503:NC_012853.1/CP001625.1; plasmid pR132504:NC_012852.1/CP001626.1; plasmid pR132505:NC_012854.1/CP001627.1	-	6	7305	6946	6/22/09	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000703	GCA_000023185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/185/GCA_000023185.1_ASM2318v1	21304718	WSM1325
Aeromonas hydrophila	644	PRJNA302121	302121	Proteobacteria	Gammaproteobacteria	5.14589	60.7758	chromosome:NZ_CP013178.1/CP013178.1; plasmid 1:NZ_CP013179.1/CP013179.1; plasmid 2:NZ_CP013180.1/CP013180.1; plasmid 3:NZ_CP013181.1/CP013181.1	-	4	4789	4545	12/2/15	4/10/17	Complete Genome	Wuhan Polytechnic University	SAMN04266592	GCA_001455365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/365/GCA_001455365.1_ASM145536v1	26823580	JBN2301
Corynebacterium sp. NML98-0116	702967	PRJNA344575	344575	Terrabacteria group	Actinobacteria	2.36545	60.7	chromosome:NZ_CP017639.1/CP017639.1	-	1	2181	2077	10/18/16	4/17/17	Complete Genome	Public Health Agency of Canada	SAMN05859797	GCA_001767255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/255/GCA_001767255.1_ASM176725v1	-	NML98-0116
Pseudomonas corrugata	47879	PRJNA309490	309490	Proteobacteria	Gammaproteobacteria	6.12436	60.7	chromosome:NZ_CP014262.1/CP014262.1	-	1	5431	5239	8/23/16	4/5/17	Complete Genome	Graz University of Technology	SAMN04453325	GCA_001708425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/425/GCA_001708425.1_ASM170842v1	-	RM1-1-4
Bacillus circulans NBRC 13626	1348626	PRJDB1314	231371	Terrabacteria group	Firmicutes	5.09725	35.6	-	BCVE01	59	4951	4791	2/27/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046991	GCA_001591585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/585/GCA_001591585.1_ASM159158v1	-	NBRC 13626
Aeromonas finlandiensis	1543375	PRJNA260478	260478	Proteobacteria	Gammaproteobacteria	4.71751	58.6	-	JRGK01	376	4419	4074	10/8/14	4/9/17	Contig	Auburn University	SAMN03023686	GCA_000764645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/645/GCA_000764645.1_ASM76464v1	25852023	4287D
Halothiobacillus sp. LS2	1860122	PRJNA325348	325348	Proteobacteria	Gammaproteobacteria	2.90896	60.7	chromosome:NZ_CP016027.1/CP016027.1	-	1	2615	2542	6/14/16	4/12/17	Complete Genome	South China University of Technology	SAMN05189898	GCA_001663815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/815/GCA_001663815.1_ASM166381v1	-	LS2
Lactobacillus panis DSM 6035	1423782	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.00651	48.1	-	AZGM01	150	1916	1765	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369492	GCA_001435935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/935/GCA_001435935.1_ASM143593v1	26415554	DSM 6035
Faecalicatena fissicatena	290055	PRJNA283563	283563	Terrabacteria group	Firmicutes	5.01424	45.6	-	LDAQ01	184	4438	4276	6/15/15	5/31/17	Contig	Seoul National University	SAMN03652781	GCA_001028025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/025/GCA_001028025.1_ASM102802v1	-	KCTC 15010
Xenorhabdus griffiniae	351672	PRJNA283267	283267	Proteobacteria	Gammaproteobacteria	4.18376	44.7	-	LDNM01	231	3993	3614	6/15/15	4/17/17	Scaffold	University of the Witwatersrand	SAMN03611398	GCA_001028135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/135/GCA_001028135.1_ASM102813v1	26184941	BMMCB
Pseudomonas sp. StFLB209	1028989	PRJDB3085	259618	Proteobacteria	Gammaproteobacteria	6.33237	60.7	chromosome:NZ_AP014637.1/AP014637.1	-	1	5667	5491	9/3/14	4/17/17	Complete Genome	"Department of Material and Environmental Chemistry, Graduate School of Engineering, Utsunomiya University"	SAMD00019511	GCA_000829415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/415/GCA_000829415.1_ASM82941v1	25323715	StFLB209
Parvularcula bermudensis HTCC2503	314260	PRJNA13509	13509	Proteobacteria	Alphaproteobacteria	2.90264	60.7	chromosome:NC_014414.1/CP002156.1	-	1	2691	2611	8/16/10	4/17/17	Complete Genome	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02603918	GCA_000152825.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/825/GCA_000152825.2_ASM15282v2	21037002	HTCC2503
Anaerobacillus macyae	157733	PRJNA286270	286270	Terrabacteria group	Firmicutes	4.25678	39.8	-	LELK01	15	4304	4147	6/25/15	4/17/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN03766539	GCA_001039475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/475/GCA_001039475.1_ASM103947v1	26272580	DSM 16346
Bizionia psychrotolerans	1492901	PRJNA251503	251503	FCB group	Bacteroidetes/Chlorobi group	0.500897	33.3	-	JNGS01	22	482	422	6/25/15	4/10/17	Contig	Korea Food Research Institute	SAMN02834819	GCA_001039595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/595/GCA_001039595.1_ASM103959v1	-	PB-M7
Roseiflexus castenholzii DSM 13941	383372	PRJNA13462	13462	Terrabacteria group	Chloroflexi	5.7233	60.7	chromosome:NC_009767.1/CP000804.1	-	1	4704	4514	8/23/07	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598306	GCA_000017805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/805/GCA_000017805.1_ASM1780v1	-	DSM 13941
Muribacter muris	67855	PRJNA270187	270187	Proteobacteria	Gammaproteobacteria	2.45736	44.7	-	JWIZ01	126	2423	2248	6/23/15	4/17/17	Contig	University of Copenhagen	SAMN03263884	GCA_001038205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/205/GCA_001038205.1_ASM103820v1	26296776	Ackerman80-443D
Ornithinibacillus contaminans	694055	PRJNA257115	257115	Terrabacteria group	Firmicutes	3.38944	38	-	LDPV02	53	3430	3289	6/23/15	4/16/17	Contig	Zhejiang University	SAMN02947408	GCA_001038425.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/425/GCA_001038425.2_ASM103842v2	26706221	DSM 22953
Fructobacillus sp. EFB-N1	1658766	PRJNA284658	284658	Terrabacteria group	Firmicutes	1.6372	43.6	-	LDUY01	68	1638	1551	6/23/15	4/10/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03724498	GCA_001038455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/455/GCA_001038455.1_ASM103845v1	26227611	EFB-N1
Ornithinibacillus californiensis	161536	PRJNA273346	273346	Terrabacteria group	Firmicutes	3.97984	37	-	LDUE01	70	4040	3901	6/23/15	4/17/17	Contig	Zhejiang University	SAMN03290694	GCA_001038485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/485/GCA_001038485.1_ASM103848v1	26706221	DSM 16628
Puniceibacterium sp. IMCC21224	1618204	PRJNA276051	276051	Proteobacteria	Alphaproteobacteria	5.56349	60.5	-	LDPY01	9	5256	4976	6/23/15	4/10/17	Contig	Inha University	SAMN03365744	GCA_001038505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/505/GCA_001038505.1_ASM103850v1	-	IMCC21224
Bacillus pseudalcaliphilus	79884	PRJNA286830	286830	Terrabacteria group	Firmicutes	4.48741	38	-	LFJO01	25	4298	4159	6/23/15	4/17/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN03770918	GCA_001038565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/565/GCA_001038565.1_ASM103856v1	26272579	DSM 8725
Pseudomonas fluorescens	294	PRJNA320923	320923	Proteobacteria	Gammaproteobacteria	6.25333	60.6966	chromosome:NZ_CP015639.1/CP015639.1; plasmid unnamed:NZ_CP015640.1/CP015640.1	-	2	5806	5597	8/23/16	4/5/17	Complete Genome	Institute of Technology Carlow	SAMN04992598	GCA_001708485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/485/GCA_001708485.1_ASM170848v1	-	L228
Bacillus marisflavi	189381	PRJNA291105	291105	Terrabacteria group	Firmicutes	4.31209	48.6	-	LGUE01	11	4375	4252	8/26/15	4/11/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN03940004	GCA_001274775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/274/775/GCA_001274775.1_ASM127477v1	26659687	JCM 11544
Xenorhabdus khoisanae	880157	PRJNA285285	285285	Proteobacteria	Gammaproteobacteria	4.65819	43.6	-	LFCV01	266	4180	3886	6/22/15	4/17/17	Contig	University of Witwatersrand	SAMN03743593	GCA_001037465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/465/GCA_001037465.1_ASM103746v1	26251496	MCB
Vogesella sp. LIG4	1192162	PRJEB14437	325917	Proteobacteria	Betaproteobacteria	4.14734	63.9	chromosome I:NZ_LT607802.1/LT607802.1	-	1	3820	3688	8/16/16	7/11/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN02745946	GCA_900090205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/090/205/GCA_900090205.1_IMG-taxon_2517093049_annotated_assembly	-	LIG4
Pseudomonas deceptionensis	882211	PRJNA274345	274345	Proteobacteria	Gammaproteobacteria	5.05293	58.6	-	JYKX01	15	4687	4552	6/30/15	6/26/17	Contig	"Zentralinstitut fuer Ernaehrungs- und Lebensmittelforschung (ZIEL), WZW, TUM"	SAMN03328792	GCA_001042895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/895/GCA_001042895.1_G8684	26675012	DSM 26521
Pseudomonas lini	163011	PRJEB16415	349358	Proteobacteria	Gammaproteobacteria	6.52984	58.8	chromosome I:NZ_LT629746.1/LT629746.1	-	1	5963	5752	10/21/16	4/13/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04490191	GCA_900104735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/735/GCA_900104735.1_IMG-taxon_2636416176_annotated_assembly	-	BS3782
Pseudomonas taetrolens	47884	PRJNA274345	274345	Proteobacteria	Gammaproteobacteria	4.9219	58.3	-	JYLA01	24	4536	4386	6/30/15	6/26/17	Contig	"Zentralinstitut fuer Ernaehrungs- und Lebensmittelforschung (ZIEL), WZW, TUM"	SAMN03328798	GCA_001042915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/915/GCA_001042915.1_G8690	26675012	DSM 21104
Paraburkholderia rhizoxinica HKI 454	882378	PRJEA51915	51915	Proteobacteria	Betaproteobacteria	3.75014	60.6963	chromosome:NC_014722.1/FR687359.1; plasmid pBRH01:NC_014718.1/FR687360.1; plasmid pBRH02:NC_014723.1/FR687361.1	-	3	3341	2970	11/15/10	4/17/17	Complete Genome	Leibniz Institute for Natural Product Research and Infection Biology (HKI)	SAMEA2272497	GCA_000198775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/198/775/GCA_000198775.1_ASM19877v1	21131495	HKI 454
Leclercia sp. LK8	1628210	PRJNA277400	277400	Proteobacteria	Gammaproteobacteria	5.20977	55.4	-	LDUO01	75	5082	4838	6/30/15	4/10/17	Contig	University of Malaya	SAMN03392517	GCA_001043635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/635/GCA_001043635.1_ASM104363v1	-	LK8
Methylobacterium platani JCM 14648	1295136	PRJNA272475	272475	Proteobacteria	Alphaproteobacteria	6.85177	71.1	-	JXOD01	554	6393	5962	6/30/15	4/10/17	Contig	CSIR-Institute of Microbial Technology	SAMN03282444	GCA_001043885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/885/GCA_001043885.1_ASM104388v1	-	JCM 14648
Aeromonas media WS	1208104	PRJNA170164	170164	Proteobacteria	Gammaproteobacteria	4.78843	60.6889	chromosome:NZ_CP007567.1/CP007567.1; plasmid pWSY:NZ_CP007568.1/CP007568.1	-	2	4480	4087	4/22/14	4/9/17	Complete Genome	"College of Life Science, Wuhan University"	SAMN02472129	GCA_000287215.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/215/GCA_000287215.3_ASM28721v3	23144426	WS
Methylobacterium tarhaniae	1187852	PRJNA278106	278106	Proteobacteria	Alphaproteobacteria	6.74342	70.4	-	LABZ01	483	6152	5739	6/30/15	4/16/17	Contig	CSIR-Institute of Microbial Technology	SAMN03406606	GCA_001043955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/955/GCA_001043955.1_ASM104395v1	-	DSM 25844
Methylobacterium variabile	298794	PRJNA278104	278104	Proteobacteria	Alphaproteobacteria	7.43359	70.7	-	LABY01	562	6898	6402	6/30/15	4/16/17	Contig	CSIR-Institute of Microbial Technology	SAMN03406604	GCA_001043975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/975/GCA_001043975.1_ASM104397v1	-	DSM 16961
Agrobacterium arsenijevicii	1585697	PRJNA270316	270316	Proteobacteria	Alphaproteobacteria	6.29848	58.7	-	JWIT01	74	5982	5761	3/10/15	4/10/17	Scaffold	"University of Belgrade, Faculty of Agriculture"	SAMN03265469	GCA_000949895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/895/GCA_000949895.1_ASM94989v1	25908139	KFB 330
Candidatus Achromatium palustre	1662188	PRJNA251325	251325	Proteobacteria	Gammaproteobacteria	3.64568	38.1	-	LFCU01	276	-	-	7/1/15	3/30/16	Contig	University of North Carolina at Chapel Hill	SAMN03742159	GCA_001044195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/195/GCA_001044195.1_ASM104419v1	27014417	-
Methylophilales bacterium MBRSF5	1623448	PRJNA276503	276503	Proteobacteria	Betaproteobacteria	1.35291	35.5	chromosome:NZ_CP011001.1/CP011001.1	-	1	1457	1409	7/1/15	4/10/17	Chromosome	King Abdullah University of Science and Technology (KAUST)	SAMN03377046	GCA_001044335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/335/GCA_001044335.1_ASM104433v1	-	MBRSF5
Methylophilales bacterium MBRS-H7	1623450	PRJNA276503	276503	Proteobacteria	Betaproteobacteria	1.35288	35.5	chromosome:NZ_CP011002.1/CP011002.1	-	1	1459	1411	7/1/15	4/10/17	Chromosome	King Abdullah University of Science and Technology (KAUST)	SAMN03377047	GCA_001044355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/355/GCA_001044355.1_ASM104435v1	-	MBRS-H7
Methylophilales bacterium MBRSG12	1623449	PRJNA276503	276503	Proteobacteria	Betaproteobacteria	1.35283	35.5	chromosome:NZ_CP011003.1/CP011003.1	-	1	1459	1411	7/1/15	4/10/17	Chromosome	King Abdullah University of Science and Technology (KAUST)	SAMN03377048	GCA_001044375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/375/GCA_001044375.1_ASM104437v1	-	MBRSG12
Streptomyces roseus	66430	PRJNA287805	287805	Terrabacteria group	Actinobacteria	7.83474	72.3	-	LFML01	163	7145	6697	7/1/15	3/11/17	Scaffold	CINVESTAV-Langebio	SAMN03787768	GCA_001044425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/425/GCA_001044425.1_ASM104442v1	-	ATCC 31245
Caenimonas sp. SL110	1450524	PRJNA235880	235880	Proteobacteria	Betaproteobacteria	4.72144	63.4	-	1-Jan	74	4373	4259	7/1/15	4/10/17	Scaffold	"Institute of Microbiology, ASCR"	SAMN02586129	GCA_001044395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/395/GCA_001044395.1_ASM104439v1	25394509	SL110
Chryseobacterium angstadtii	558151	PRJNA287710	287710	FCB group	Bacteroidetes/Chlorobi group	5.20277	37.7	-	LFND01	11	4562	4441	7/2/15	4/17/17	Contig	GCAT-SEEK	SAMN03785395	GCA_001045465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/465/GCA_001045465.1_ASM104546v1	23996834	KM
Chitinispirillum alkaliphilum	1008392	PRJNA283172	283172	FCB group	Fibrobacteres	4.43477	42.9	-	LDWW01	160	3817	3775	7/2/15	6/16/16	Contig	Centre Bioengineering RAS	SAMN03609695	GCA_001045525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/525/GCA_001045525.1_ASM104552v1	27065971	ACht6-1
Candidatus Burkholderia pumila	1090375	PRJNA253357	253357	Proteobacteria	Betaproteobacteria	3.68122	59.3	-	LELG01	519	4763	1737	7/2/15	7/2/15	Contig	University of Zurich	SAMN03764750	GCA_001045575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/575/GCA_001045575.1_ASM104557v1	-	UZHbot3
Tetrasphaera japonica T1-X7	1194083	PRJEB36	212592	Terrabacteria group	Actinobacteria	5.16232	71.2	-	CAJB01	1	4661	4258	7/15/14	4/16/17	Scaffold	"Department of Biotechnology, Chemistry and Environmental Engineering, Aalborg University"	SAMEA3146271	GCA_001046855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/855/GCA_001046855.1_ASM104685v1	23178666	T1-X7
Tetrasphaera jenkinsii Ben 74	1193518	PRJEB37	215314	Terrabacteria group	Actinobacteria	3.80999	68.1	-	CAJC01	1	3662	3355	7/15/14	4/17/17	Scaffold	"Department of Biotechnology, Chemistry and Environmental Engineering, Aalborg University"	SAMEA3146295	GCA_001046875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/875/GCA_001046875.1_ASM104687v1	23178666	Ben 74
Pseudarthrobacter siccitolerans	861266	PRJEB1189	247738	Terrabacteria group	Actinobacteria	4.76517	65.1	-	CAQI01	64	4424	4262	5/15/14	4/16/17	Contig	University of Granada	SAMEA3146251	GCA_001046895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/895/GCA_001046895.1_ASM104689v1	24948757	4J27
Dysgonomonas macrotermitis	1346286	PRJEB18169	355457	FCB group	Bacteroidetes/Chlorobi group	4.66155	38.5	-	FQUC01	51	3929	3825	12/2/16	6/12/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444362	GCA_900128985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/985/GCA_900128985.1_IMG-taxon_2695420931_annotated_assembly	-	DSM 27370
Fructobacillus tropaeoli	709323	PRJDB3977	288288	Terrabacteria group	Firmicutes	1.68512	44.2	-	BBXT01	122	1650	1555	6/25/15	4/17/17	Contig	"Faculty of Bioindustry, Tokyo University of Agriculture"	SAMD00031994	GCA_001047135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/135/GCA_001047135.1_ASM104713v1	26715526	F214-1
Pseudooceanicola atlanticus	1461694	PRJNA196736	196736	Proteobacteria	Alphaproteobacteria	4.9383	64.1	-	AQQX01	47	4664	4565	10/24/14	4/9/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02954390	GCA_000768315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/315/GCA_000768315.1_ASM76831v1	25663028	22II-s11g
Streptomyces regensis	68263	PRJNA238534	238534	Terrabacteria group	Actinobacteria	15.0929	71.2	-	LFVR01	960	14021	12910	7/7/15	7/7/15	Contig	University of Illinois	SAMN02900576	GCA_001047335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/335/GCA_001047335.1_B11479idba	-	NRRL B-11479
Clostridium cylindrosporum DSM 605	1121307	PRJNA288090	288090	Terrabacteria group	Firmicutes	2.73503	31.4	-	LFVU01	28	2650	2563	7/7/15	4/10/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03794733	GCA_001047375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/375/GCA_001047375.1_ASM104737v1	26272578	DSM 605
Loktanella vestfoldensis	245188	PRJNA380207	380207	Proteobacteria	Alphaproteobacteria	3.98736	60.6796	chromosome:NZ_CP021431.1/CP021431.1; plasmid pSMR4r-1:NZ_CP021432.1/CP021432.1; plasmid pSMR4r-2:NZ_CP021433.1/CP021433.1	-	3	3991	3850	5/30/17	6/1/17	Complete Genome	University of Gothenburg	SAMN07142919	GCA_002158905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/158/905/GCA_002158905.1_ASM215890v1	-	SMR4r
Fructobacillus ficulneus	157463	PRJDB3977	288288	Terrabacteria group	Firmicutes	1.54367	43.9	-	BBXQ01	179	1548	1390	6/25/15	4/17/17	Contig	"Faculty of Bioindustry, Tokyo University of Agriculture"	SAMD00031991	GCA_001047075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/075/GCA_001047075.1_ASM104707v1	26715526	JCM 12225
Fructobacillus pseudoficulneus	220714	PRJEB15784	347717	Terrabacteria group	Firmicutes	1.41356	44.5	-	FNWS01	18	1386	1295	10/27/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660469	GCA_900108455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/455/GCA_900108455.1_IMG-taxon_2600254955_annotated_assembly	-	DSM 15468
Vibrio diabolicus	50719	PRJEB5898	284704	Proteobacteria	Gammaproteobacteria	5.13252	44.8	-	CCKK01	29	4842	4396	5/20/15	4/17/17	Contig	STATION BIOLOGIQUE DE ROSCOFF	SAMEA2591299	GCA_001048675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/675/GCA_001048675.1_VDIABv1_PRJEB5898	25273176	CNCM I-1629
Brenneria goodwinii	1109412	PRJEB8200	286748	Proteobacteria	Gammaproteobacteria	5.35006	53.1	-	CGIG01	1	4729	4542	6/11/15	4/10/17	Contig	LIV	SAMEA3201438	GCA_001049335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/335/GCA_001049335.1_B_goodwinii_PB	-	OBR1
Mycobacterium aurum	1791	PRJEB8229	278613	Terrabacteria group	Actinobacteria	6.01933	67.5	-	CVQQ01	46	5711	5556	5/14/15	4/16/17	Scaffold	LSHTM	SAMEA3216266	GCA_001049355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/355/GCA_001049355.1_M_aurum	-	NCTC 10437
Brachyspira suanatina	381802	PRJEB9032	285654	Spirochaetes	Spirochaetia	3.25801	27	-	CVLB01	34	2839	2698	6/1/15	4/17/17	Contig	SLU	SAMEA3323226	GCA_001049755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/755/GCA_001049755.1_BRSU_AN4859_03	-	AN4859/03
Rubeoparvulum massiliense	1631346	PRJEB9319	283377	Terrabacteria group	Firmicutes	2.8438	43.8	-	CVPE01	6	2782	2653	5/9/15	4/10/17	Contig	URMITE	SAMEA3375520	GCA_001049895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/895/GCA_001049895.1_Rubeoparvulum_massiliensis	-	mt6
Drancourtella massiliensis	1632013	PRJEB9345	283600	Terrabacteria group	Firmicutes	3.05733	45.2	-	CVPG01	7	2914	2784	5/12/15	4/10/17	Contig	URMITE	SAMEA3381209	GCA_001049915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/915/GCA_001049915.1_Drancourtella_massiliensis	-	GD1
Nereida ignava	282199	PRJEB8965	284894	Proteobacteria	Alphaproteobacteria	2.88835	54	-	CVPC01	69	2892	2757	5/25/15	4/10/17	Contig	UVEG	SAMEA3312982	GCA_001049735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/735/GCA_001049735.1_N.ignavaCECT5292_MIRA	-	CECT 5292
Mycobacterium nonchromogenicum	1782	PRJNA299467	299467	Terrabacteria group	Actinobacteria	4.46533	67.8	-	LQPI01	91	4141	3987	4/20/17	4/22/17	Contig	University of Trento	SAMN04216939	GCA_002101775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/775/GCA_002101775.1_ASM210177v1	-	DSM 44164
Arthrobacter sp. A3	595593	PRJNA259694	259694	Terrabacteria group	Actinobacteria	4.45829	60.6388	chromosome:NZ_CP013745.1/CP013745.1; plasmid unnamed:NZ_CP013746.1/CP013746.1	-	2	4033	3902	1/4/16	4/16/17	Complete Genome	Chinese Academy of Sciences	SAMN03010510	GCA_000755585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/585/GCA_000755585.2_ASM75558v2	-	A3
Anaerolinea thermolimosa	229919	PRJDB4019	288358	Terrabacteria group	Chloroflexi	4.10464	54.6	-	BBXW01	81	3726	3592	7/4/15	4/17/17	Contig	National Institute of Advanced Industrial Science and Technology (AIST)	SAMD00034885	GCA_001050195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/195/GCA_001050195.1_ASM105019v1	26383658	IMO-1
Bellilinea caldifistulae	360411	PRJNA289119	289119	Terrabacteria group	Chloroflexi	3.65568	52.8	-	LGHJ01	31	3430	3328	10/2/15	4/11/17	Contig	California Institute of Technology	SAMN03842211	GCA_001306055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/055/GCA_001306055.1_ASM130605v1	-	GOMI-1
Longilinea arvoryzae	360412	PRJDB4023	288362	Terrabacteria group	Chloroflexi	4.43831	56.9	-	BBXY01	2	3939	3845	7/4/15	4/16/17	Scaffold	National Institute of Advanced Industrial Science and Technology (AIST)	SAMD00034889	GCA_001050235.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/235/GCA_001050235.2_ASM105023v2	26383658	KOME-1
Levilinea saccharolytica	229921	PRJNA289680	289680	Terrabacteria group	Chloroflexi	4.23008	59.8	-	LGCM01	65	3708	3600	10/2/15	4/11/17	Contig	California Institute of Technology	SAMN03856835	GCA_001306035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/035/GCA_001306035.1_ASM130603v1	26586894	KIBI-1
Leptolinea tardivitalis	229920	PRJDB4021	288360	Terrabacteria group	Chloroflexi	3.68704	46.8	-	BBYA01	15	3357	3279	7/4/15	4/6/17	Contig	National Institute of Advanced Industrial Science and Technology (AIST)	SAMD00034887	GCA_001050275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/275/GCA_001050275.1_ASM105027v1	26383658	YMTK-2
Pseudomonas azotoformans	47878	PRJNA374904	374904	Proteobacteria	Gammaproteobacteria	6.58129	60.6	chromosome:NZ_CP019856.1/CP019856.1	-	1	6065	5834	2/28/17	3/2/17	Complete Genome	Nanjing Agricultural University	SAMN06339647	GCA_002007785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/785/GCA_002007785.1_ASM200778v1	-	F77
Tetrasphaera australiensis Ben110	1193182	PRJEB35	212565	Terrabacteria group	Actinobacteria	4.26497	68.6	-	CAJA01	1	4261	3621	2/21/14	4/16/17	Scaffold	"Department of Biotechnology, Chemistry and Environmental Engineering, Aalborg University"	SAMEA3146317	GCA_001050535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/535/GCA_001050535.1_ASM105053v1	23178666	Ben110
Candidatus Competibacter denitrificans Run_A_D11	1400863	PRJEB4342	236415	Proteobacteria	Gammaproteobacteria	4.08487	57	-	CBTJ02	120	3779	3606	2/3/14	4/10/17	Scaffold	"Department of Biotechnology, Chemistry and Environmental Engineering, Aalborg University"	SAMEA3146267	GCA_001051235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/235/GCA_001051235.2_ASM105123v2	-	Run_A_D11
Pseudomonas koreensis	198620	PRJNA322127	322127	Proteobacteria	Gammaproteobacteria	5.99123	60.6	chromosome:NZ_CP015852.1/CP015852.1	-	1	5457	5289	6/2/16	4/12/17	Complete Genome	Zhejiang Sci-Tech University	SAMN05017671	GCA_001654515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/654/515/GCA_001654515.1_ASM165451v1	-	CRS05-R5
Mycobacterium conceptionense	451644	PRJNA288077	288077	Terrabacteria group	Actinobacteria	7.09889	66.4	-	LFOD01	131	7015	6749	7/14/15	4/3/17	Contig	UCSF	SAMN03793182	GCA_001077745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/745/GCA_001077745.1_ASM107774v1	-	MLE
Catenovulum maritimum	1513271	PRJNA281057	281057	Proteobacteria	Gammaproteobacteria	4.5495	37.9	-	LAZL01	47	3753	3631	7/9/15	3/2/17	Scaffold	Shandong University at Weihai	SAMN03481869	GCA_001050375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/375/GCA_001050375.1_ASM105037v1	26036673	Q1
Pseudomonas fluorescens	294	PRJNA292571	292571	Proteobacteria	Gammaproteobacteria	6.86822	60.6	chromosome:NZ_CP012400.1/CP012400.1	-	1	6373	6148	4/7/16	4/5/17	Complete Genome	Universite de Moncton	SAMN03981702	GCA_001612705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/705/GCA_001612705.1_ASM161270v1	27231373	LBUM636
Pseudomonas alkylphenolica	237609	PRJNA255831	255831	Proteobacteria	Gammaproteobacteria	5.76462	60.6	chromosome:NZ_CP009048.1/CP009048.1	-	1	5377	5147	8/29/14	9/21/17	Complete Genome	Seoul National University	SAMN02929205	GCA_000746525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/525/GCA_000746525.1_ASM74652v1	-	KL28
Mycobacterium heckeshornense	110505	PRJNA288073	288073	Terrabacteria group	Actinobacteria	5.01017	65.9	-	LFOF01	191	4855	4560	7/14/15	4/10/17	Contig	UCSF	SAMN03793170	GCA_001077755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/755/GCA_001077755.1_ASM107775v1	26316632	RLE
Photobacterium swingsii	680026	PRJNA286212	286212	Proteobacteria	Gammaproteobacteria	5.52352	43.7	-	LELC01	98	4910	4177	7/14/15	4/17/17	Contig	"CIAD, A.C."	SAMN03766180	GCA_001077885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/885/GCA_001077885.1_CAIM1393T.ver1	20228205	CAIM 1393
Pseudomonas stutzeri	316	PRJNA240232	240232	Proteobacteria	Gammaproteobacteria	4.73136	60.6	chromosome:NZ_CP007441.1/CP007441.1	-	1	4317	4167	3/12/14	4/2/17	Complete Genome	University of Arizona	SAMN02673421	GCA_000590475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/475/GCA_000590475.1_ASM59047v1	24903873	28a24
bacteria symbiont BFo1 of Frankliniella occidentalis	1628855	PRJNA234511	234511	unclassified Bacteria	unclassified Bacteria (miscellaneous)	5.14967	56.4	-	JMSO01	528	4815	4650	7/15/15	7/15/15	Contig	Swansea University	SAMN02769495	GCA_001078075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/075/GCA_001078075.1_ASM107807v1	-	BFo1
bacteria symbiont BFo2 of Frankliniella occidentalis	1628856	PRJNA234511	234511	unclassified Bacteria	unclassified Bacteria (miscellaneous)	3.13475	48	-	JMSP01	757	3057	2910	7/15/15	7/15/15	Contig	Swansea University	SAMN02769497	GCA_001078095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/095/GCA_001078095.1_ASM107809v1	-	BFo2
Veillonella tobetsuensis	1110546	PRJDB3830	287330	Terrabacteria group	Firmicutes	2.16128	38.5	-	BBXI01	48	1991	1896	6/17/15	4/10/17	Scaffold	Health Sciences University of Hokkaido	SAMD00028777	GCA_001078375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/375/GCA_001078375.1_ASM107837v1	26294617	ATCC BAA-2400
Candidatus Rhodobacter lobularis	1675527	PRJNA287220	287220	Proteobacteria	Alphaproteobacteria	5.0375	63.5	-	LFTY01	2	4824	4679	7/17/15	4/10/17	Scaffold	Spongex	SAMN03777540	GCA_001078595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/595/GCA_001078595.1_ASM107859v1	26337883	-
Bifidobacterium animalis subsp. lactis ATCC 27673	1167629	PRJNA133057	133057	Terrabacteria group	Actinobacteria	1.96301	60.6	chromosome:NC_022523.1/CP003941.1	-	1	1675	1523	9/27/13	4/2/17	Complete Genome	Penn State	SAMN02603715	GCA_000471945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/945/GCA_000471945.1_ASM47194v1	23995933	ATCC 27673
Dakarella massiliensis	1506471	PRJEB9582	286754	Proteobacteria	Betaproteobacteria	2.47688	57	-	CVTY01	7	2233	2131	6/17/15	5/30/17	Contig	URMITE	SAMEA3449146	GCA_001182045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/045/GCA_001182045.1_Dakarella_massiliensis	-	ND3
Dyella-like sp. DHo	1664276	PRJNA286074	286074	Proteobacteria	Gammaproteobacteria	4.1912	69.8	-	LFQR01	333	3658	3472	7/20/15	4/10/17	Contig	Volcani Center - Newe Yaar	SAMN03766538	GCA_001182895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/895/GCA_001182895.1_ASM118289v1	-	DHo
Actinobaculum suis	1657	PRJEB15800	347778	Terrabacteria group	Actinobacteria	2.20051	57.8	-	FNAU01	38	1753	1656	10/20/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421878	GCA_900102025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/025/GCA_900102025.1_IMG-taxon_2675903157_annotated_assembly	-	DSM 20639
Desulfocarbo indianensis	1348163	PRJNA282561	282561	Proteobacteria	delta/epsilon subdivisions	5.11404	63	-	LBMP01	334	4563	4383	7/21/15	4/10/17	Scaffold	Indiana University	SAMN03571290	GCA_001184205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/205/GCA_001184205.1_ASM118420v1	26337881	SCBM
Candidatus Paraburkholderia calva	242161	PRJNA253361	253361	Proteobacteria	Betaproteobacteria	4.20861	61.4	-	LFLF01	307	5815	2002	7/21/15	7/21/15	Contig	University of Zurich	SAMN03775198	GCA_001184395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/395/GCA_001184395.1_BUMB	-	UZHbot6
Candidatus Burkholderia humilis	1090471	PRJNA253360	253360	Proteobacteria	Betaproteobacteria	5.14899	60.1	-	LFMX01	354	5186	2988	7/21/15	4/10/17	Contig	University of Zurich	SAMN03775038	GCA_001184405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/405/GCA_001184405.1_ASM118440v1	-	UZHbot5
Yersinia nurmii	685706	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	4.14313	48.3	-	CPYD01	45	3784	3598	3/23/15	4/17/17	Scaffold	SC	SAMEA1486436	GCA_001112925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/925/GCA_001112925.1_8016_2_91	-	type strain: CIP110231
Yersinia pekkanenii	1288385	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	5.04699	47.4	-	CQAZ01	234	4947	4515	3/22/15	4/10/17	Scaffold	SC	SAMEA859875	GCA_001152565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/565/GCA_001152565.1_4821_6_12	-	A125KOH2
Lysinibacillus xylanilyticus	582475	PRJNA338387	338387	Terrabacteria group	Firmicutes	4.76353	36.8	-	MDDN01	49	4703	4474	8/21/16	4/13/17	Contig	Technische Universitaet Muenchen	SAMN05554320	GCA_001708185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/185/GCA_001708185.1_ASM170818v1	-	SR-86
uncultured Desulfofustis sp. PB-SRB1	1385624	PRJNA215076	215076	Proteobacteria	delta/epsilon subdivisions	3.68343	54.5	-	AVFQ01	422	3614	3579	11/5/13	11/5/13	Contig	UC Davis	SAMN02303577	GCA_000495595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/595/GCA_000495595.1_berrySRB1	-	-
Thiohalocapsa sp. ML1	1431688	PRJNA229990	229990	Proteobacteria	Gammaproteobacteria	6.30535	68.3	-	JABX01	137	5484	5210	12/17/15	4/11/17	Contig	The Pennsylvania State University	SAMN02422661	GCA_001469165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/165/GCA_001469165.1_ML-1	24976102	ML1
uncultured archaeon A07HR67	1412871	PRJNA224118	224118	environmental samples	uncultured archaeon A07HR67	2.89047	65.7	-	AYLI01	16	2940	2889	11/1/13	3/19/14	Scaffold	"University of California, San Diego, Scripps Institution of Oceanography"	SAMN02347633	GCA_000496175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/175/GCA_000496175.1_A07HR67_11212a_select	24335829	-
uncultured archaeon A07HB70	1412872	PRJNA224119	224119	environmental samples	uncultured archaeon A07HB70	2.38982	69	-	AYLJ01	15	2553	2513	11/1/13	3/19/14	Scaffold	"University of California, San Diego, Scripps Institution of Oceanography"	SAMN02347633	GCA_000496195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/195/GCA_000496195.1_A07HB70_072612b_select	24335829	-
uncultured archaeon A07HN63	1412873	PRJNA224120	224120	environmental samples	uncultured archaeon A07HN63	2.39269	61.4	-	AYLK01	37	2550	2507	11/1/13	3/19/14	Scaffold	"University of California, San Diego, Scripps Institution of Oceanography"	SAMN02347633	GCA_000496215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/215/GCA_000496215.1_A07HN63_021313_select	24335829	-
uncultured archaeon A07HR60	1412874	PRJNA224121	224121	environmental samples	uncultured archaeon A07HR60	2.87625	58.6	-	AYLL01	14	2910	2856	11/1/13	3/19/14	Scaffold	"University of California, San Diego, Scripps Institution of Oceanography"	SAMN02347633	GCA_000496235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/235/GCA_000496235.1_A07HR60_111512_select	24335829	-
uncultured Chromatiaceae bacterium ML_Gamma	1434775	PRJNA229478	229478	Proteobacteria	Gammaproteobacteria	5.44283	65.9	-	AZMQ01	485	-	-	8/13/14	8/13/14	Scaffold	Penn State	SAMN02989761	GCA_000739255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/255/GCA_000739255.1_ML_Gamma	-	-
uncultured archaeon	115547	PRJNA256113	256113	environmental samples	uncultured archaeon	2.22669	46.4	chromosome:CP009479.1	-	1	2004	1947	3/30/15	3/30/15	Chromosome	CSIRO	SAMN02940502	GCA_000965745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/745/GCA_000965745.1_ASM96574v1	-	-
Methanoculleus bourgensis MS2	1201294	PRJEB167	170845	Euryarchaeota	Methanomicrobia	2.78977	60.6	chromosome I:NC_018227.2/HE964772.2	-	1	2656	2538	7/20/12	4/10/17	Complete Genome	irena.maus	SAMEA2272323	GCA_000304355.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/355/GCA_000304355.2_Mb_MS2	-	MS2T
Gordonia jacobaea	122202	PRJNA283616	283616	Terrabacteria group	Actinobacteria	4.92554	65.3	-	LDTZ01	42	4466	4325	7/23/15	4/16/17	Contig	Barcelona University	SAMN03653484	GCA_001186365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/365/GCA_001186365.1_ASM118636v1	26337890	mv1
Streptomyces roseochromogenus subsp. oscitans DS 12.976	1352936	PRJNA210150	210150	Terrabacteria group	Actinobacteria	9.78226	70.2445	chromosome:NZ_CM002285.1/CM002285.1; plasmid pSros1:NZ_CM002286.1/CM002286.1	AWQX01	2	17984	16858	11/19/13	3/9/17	Chromosome	GenBioCom	SAMN02469393	GCA_000497445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/445/GCA_000497445.1_S.roseochromogenes_v1	24407645	DS 12.976
Rhizobium leguminosarum bv. viciae	387	PRJNA395792	395792	Proteobacteria	Alphaproteobacteria	7.95255	60.5875	chromosome:NZ_CP022665.1/CP022665.1; plasmid pPR1:NZ_CP022666.1/CP022666.1; plasmid pPR2:NZ_CP022667.1/CP022667.1; plasmid pPR3:NZ_CP022668.1/CP022668.1; plasmid pPR4:NZ_CP022669.1/CP022669.1; plasmid pPR5:NZ_CP022670.1/CP022670.1; plasmid pPR6:NZ_CP022671.1/CP022671.1	-	7	7840	7439	8/8/17	8/10/17	Complete Genome	CSIR-Institute of Himalayan Bioresource Technology	SAMN07414824	GCA_002243365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/365/GCA_002243365.1_ASM224336v1	-	BIHB 1217
Gilvimarinus polysaccharolyticus	863921	PRJNA280384	280384	Proteobacteria	Gammaproteobacteria	3.74606	49.4	-	LFIJ01	7	3293	3214	7/27/15	4/17/17	Scaffold	Zhejiang University	SAMN03445816	GCA_001187555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/555/GCA_001187555.1_ASM118755v1	-	YN3
Brevibacillus reuszeri	54915	PRJNA289729	289729	Terrabacteria group	Firmicutes	6.98649	47	-	LGIQ01	24	6892	6653	7/27/15	4/17/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN03857465	GCA_001187725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/725/GCA_001187725.1_ASM118772v1	26383671	DSM 9887
Paracoccus sanguinis	1545044	PRJEB16569	349823	Proteobacteria	Alphaproteobacteria	3.58828	70.7	-	FNNA01	21	3422	3286	10/22/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444276	GCA_900106665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/665/GCA_900106665.1_IMG-taxon_2693429863_annotated_assembly	-	DSM 29303
uncultured Acidilobus sp. MG	1410573	PRJNA221622	221622	TACK group	Crenarchaeota	1.54851	59.1	-	AYMA01	35	1841	1787	11/5/13	11/5/13	Contig	Montana State University	SAMN02364255	GCA_000495675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/675/GCA_000495675.1_Acidilobus_sp._MG	-	-
Trabulsiella odontotermitis	379893	PRJNA291074	291074	Proteobacteria	Gammaproteobacteria	4.60255	54.8	-	LIFV01	41	4403	4169	9/23/15	4/4/17	Scaffold	IBT-UNAM	SAMN03943320	GCA_001297765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/765/GCA_001297765.1_ASM129776v1	26543120	TbO2.3
Parcubacteria bacterium C7867-001	1659195	PRJNA283788	283788	unclassified Bacteria	Bacteria candidate phyla	0.812017	53.4	-	LFCK01	5	973	927	7/30/15	7/30/15	Contig	Pacific Northwest National Laboratroy	SAMN03737323	GCA_001189095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/095/GCA_001189095.1_ASM118909v1	26257709	-
Parcubacteria bacterium C7867-003	1659197	PRJNA283788	283788	unclassified Bacteria	Bacteria candidate phyla	0.529551	38.2	-	LFCM01	29	580	549	7/30/15	7/30/15	Scaffold	Pacific Northwest National Laboratroy	SAMN03737325	GCA_001189085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/085/GCA_001189085.1_ASM118908v1	26257709	-
Parcubacteria bacterium C7867-002	1659196	PRJNA283788	283788	unclassified Bacteria	Bacteria candidate phyla	0.631749	44.1	-	LFCL01	29	214	206	7/30/15	7/30/15	Scaffold	Pacific Northwest National Laboratroy	SAMN03737324	GCA_001189105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/105/GCA_001189105.1_ASM118910v1	26257709	-
Parcubacteria bacterium C7867-004	1659198	PRJNA283788	283788	unclassified Bacteria	Bacteria candidate phyla	0.778726	56.1	-	LFCN01	6	893	852	7/30/15	7/30/15	Contig	Pacific Northwest National Laboratroy	SAMN03737326	GCA_001189075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/075/GCA_001189075.1_ASM118907v1	26257709	-
Parcubacteria bacterium C7867-007	1659201	PRJNA283788	283788	unclassified Bacteria	Bacteria candidate phyla	0.702407	48.1	-	LFCQ01	8	812	776	7/30/15	7/30/15	Contig	Pacific Northwest National Laboratroy	SAMN03737329	GCA_001189195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/195/GCA_001189195.1_ASM118919v1	26257709	-
Parcubacteria bacterium C7867-005	1659199	PRJNA283788	283788	unclassified Bacteria	Bacteria candidate phyla	0.56355	43.4	-	LFCO01	3	646	604	7/30/15	7/30/15	Contig	Pacific Northwest National Laboratroy	SAMN03737327	GCA_001189165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/165/GCA_001189165.1_ASM118916v1	26257709	-
Parcubacteria bacterium C7867-006	1659200	PRJNA283788	283788	unclassified Bacteria	Bacteria candidate phyla	0.67386	36.4	-	LFCP01	8	725	685	7/30/15	7/30/15	Contig	Pacific Northwest National Laboratroy	SAMN03737328	GCA_001189155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/155/GCA_001189155.1_ASM118915v1	26257709	-
Parcubacteria bacterium C7867-008	1659202	PRJNA283788	283788	unclassified Bacteria	Bacteria candidate phyla	0.808014	47.9	-	LFCR01	6	911	873	7/30/15	7/30/15	Contig	Pacific Northwest National Laboratroy	SAMN03737330	GCA_001189215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/215/GCA_001189215.1_ASM118921v1	26257709	-
Bradyrhizobium pachyrhizi	280333	PRJNA295771	295771	Proteobacteria	Alphaproteobacteria	8.96518	63.7	-	LJYE01	116	8290	7621	11/6/15	4/11/17	Scaffold	Embrapa Agrobiologia	SAMN04088244	GCA_001440015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/015/GCA_001440015.1_BR3262k88v1	-	BR3262
Arthrobacter alpinus	656366	PRJNA302249	302249	Terrabacteria group	Actinobacteria	4.33365	60.5871	chromosome:NZ_CP013200.1/CP013200.1; plasmid pRK01:NZ_CP013201.1/CP013201.1	-	2	3862	3583	11/18/15	4/11/17	Complete Genome	CSIR-Institute of Himalayan Bioresource Technology	SAMN04270919	GCA_001445575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/575/GCA_001445575.1_ASM144557v1	-	ERGS4:06
Methanosaeta harundinacea 6Ac	1110509	PRJNA76151	76151	Euryarchaeota	Methanomicrobia	2.57103	60.5692	chromosome:NC_017527.1/CP003117.1; plasmid pH6Ac:NC_016637.1/CP003118.1	-	2	2497	2399	11/16/11	4/7/17	Complete Genome	"State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences"	SAMN02603883	GCA_000235565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/565/GCA_000235565.1_ASM23556v1	22590603	6Ac
Candidatus Paraburkholderia schumannianae	1069530	PRJNA253363	253363	Proteobacteria	Betaproteobacteria	2.36273	63	-	LFJH01	283	2323	1441	7/30/15	4/16/17	Contig	University of Zurich	SAMN03776571	GCA_001189335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/335/GCA_001189335.2_ASM118933v2	-	UZHbot8
Candidatus Burkholderia verschuerenii	242163	PRJNA253359	253359	Proteobacteria	Betaproteobacteria	6.18848	61.9	-	LFJJ01	446	5932	4644	7/30/15	4/16/17	Contig	University of Zurich	SAMN03776844	GCA_001189365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/365/GCA_001189365.1_ASM118936v1	-	UZHbot4
Candidatus Phytoplasma phoenicium	198422	PRJNA253787	253787	Terrabacteria group	Tenericutes	0.345965	25.2	-	JPSQ01	78	337	286	7/30/15	4/17/17	Contig	"Department of Agricultural and Environmental Sciences, University of Milan"	SAMN02903325	GCA_001189415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/415/GCA_001189415.1_ASM118941v1	26223451	SA213
Komagataeibacter medellinensis NBRC 3288	634177	PRJDA64985	64985	Proteobacteria	Alphaproteobacteria	3.51319	60.569	chromosome:NC_016027.1/AP012159.1; plasmid pGXY020:NC_016021.1/AP012161.1; plasmid pGXY030:NC_016028.1/AP012162.1; plasmid pGXY040:NC_016022.1/AP012163.1; plasmid pGXY050:NC_016029.1/AP012164.1; plasmid pGXY060:NC_016900.1/AP012165.1; plasmid pGXY070:NC_016030.1/AP012166.1; plasmid pGXY010:NC_016037.1/AP012160.1	-	8	3360	3090	9/23/11	4/7/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00060987	GCA_000182745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/182/745/GCA_000182745.1_ASM18274v1	22123756	NBRC 3288
Rhizobium leguminosarum	384	PRJNA316801	316801	Proteobacteria	Alphaproteobacteria	8.56782	60.5283	chromosome:CP016286.1; plasmid unnamed1:CP016287.1; plasmid unnamed2:CP016289.1; plasmid unnamed3:CP016290.1; plasmid unnamed4:CP016292.1; plasmid unnamed5:CP016293.1; plasmid unnamed6:CP016291.1; plasmid unnamed7:CP016288.1	-	8	8168	7681	7/5/16	7/5/16	Complete Genome	All-Russia Research Institute for Agricultural Microbiology	SAMN05285389	GCA_001679785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/785/GCA_001679785.1_ASM167978v1	-	Vaf10
Corynebacterium aurimucosum ATCC 700975	548476	PRJNA37279	37279	Terrabacteria group	Actinobacteria	2.81923	60.5248	chromosome:NC_012590.1/CP001601.1; plasmid pET44827:NC_010813.1/FM164414.1	-	2	2663	2525	4/24/09	4/10/17	Complete Genome	"Center for BioTechnology, Bielefeld University"	SAMN02603064	GCA_000022905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/905/GCA_000022905.1_ASM2290v1	20137072	DSM 44827; ATCC 700975
Virgibacillus pantothenticus	1473	PRJNA290990	290990	Terrabacteria group	Firmicutes	4.75925	37.3	-	LGTO01	16	4339	4104	7/31/15	4/10/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN03938504	GCA_001189575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/575/GCA_001189575.1_ASM118957v1	26383648	DSM 26
Achromobacter spanius	217203	PRJNA291320	291320	Proteobacteria	Betaproteobacteria	6.46849	63.9	-	LGVG01	98	5974	5734	7/31/15	4/16/17	Contig	Tianjin University	SAMN03941562	GCA_001189595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/595/GCA_001189595.1_ASM118959v1	-	CGMCC9173
Herbaspirillum autotrophicum	180195	PRJNA287687	287687	Proteobacteria	Betaproteobacteria	6.00983	57.9	-	LFLS01	99	5421	5270	7/31/15	4/16/17	Contig	INCT FOR BIOLOGICAL NITROGEN FIXATION	SAMN03785337	GCA_001189915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/915/GCA_001189915.1_ASM118991v1	-	IAM 14942
Herbaspirillum chlorophenolicum	211589	PRJNA287688	287688	Proteobacteria	Betaproteobacteria	5.29701	61.2	-	LFLT01	192	4776	4589	7/31/15	4/10/17	Contig	INCT FOR BIOLOGICAL NITROGEN FIXATION	SAMN03785414	GCA_001189955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/955/GCA_001189955.1_ASM118995v1	-	CPW301
Herbaspirillum rhizosphaerae	346179	PRJNA287686	287686	Proteobacteria	Betaproteobacteria	5.26611	60.1	-	LFLU01	55	4750	4656	7/31/15	4/16/17	Contig	INCT FOR BIOLOGICAL NITROGEN FIXATION	SAMN03785417	GCA_001189965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/965/GCA_001189965.1_ASM118996v1	-	UMS-37
[Clostridium] purinilyticum	1503	PRJNA288931	288931	Terrabacteria group	Firmicutes	3.3973	28.8	-	LGSS01	74	3293	3173	8/3/15	4/10/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03840109	GCA_001190785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/190/785/GCA_001190785.1_ASM119078v1	26404607	DSM 1384
Bifidobacterium animalis	28025	PRJNA340074	340074	Terrabacteria group	Actinobacteria	1.94432	60.5	chromosome:NZ_CP017098.1/CP017098.1	-	1	1659	1572	7/18/17	7/21/17	Complete Genome	Korea Food Research Institute	SAMN05631165	GCA_002220485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/485/GCA_002220485.1_ASM222048v1	28702200	BL3
Candidatus Burkholderia crenata	1074049	PRJNA253365	253365	Proteobacteria	Betaproteobacteria	2.84374	59	-	LGTG01	643	2713	1665	7/31/15	4/10/17	Scaffold	University of Zurich	SAMN03838137	GCA_001190015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/190/015/GCA_001190015.1_ASM119001v1	-	UZHbot9
Caedibacter varicaedens	1629334	PRJDB3571	289986	Proteobacteria	Alphaproteobacteria	1.68685	42.1	-	BBVC01	142	1835	1661	7/14/15	4/10/17	Contig	Indiana University	SAMD00026920	GCA_001192655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/655/GCA_001192655.1_ASM119265v1	26543129	-
Flexilinea flocculi	1678840	PRJDB4039	289863	Terrabacteria group	Chloroflexi	3.51063	41.4	-	BBYH01	3	2907	2839	7/23/15	4/10/17	Scaffold	National Institute of Advanced Industrial Science and Technology (AIST)	SAMD00034989	GCA_001192795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/795/GCA_001192795.1_ASM119279v1	26450719	TC1
Lentimicrobium saccharophilum	1678841	PRJDB4040	289864	FCB group	Bacteroidetes/Chlorobi group	4.51441	46.7	-	BBYI01	2	3527	3399	7/23/15	4/10/17	Scaffold	National Institute of Advanced Industrial Science and Technology (AIST)	SAMD00034990	GCA_001192835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/835/GCA_001192835.1_ASM119283v1	26450737	TBC1
Pseudomonas sp. DR 5-09	1534110	PRJNA284318	284318	Proteobacteria	Gammaproteobacteria	6.42786	60.5	chromosome:NZ_CP011566.1/CP011566.1	-	1	5882	5700	6/3/16	4/12/17	Complete Genome	Chungnam National University	SAMN03701340	GCA_001655595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/595/GCA_001655595.1_ASM165559v1	-	DR 5-09
Candidatus Westeberhardia cardiocondylae	1594731	PRJEB8217	290592	Proteobacteria	Gammaproteobacteria	0.532684	23.4	chromosome I:LN774881.1	-	1	442	372	7/21/15	8/14/15	Chromosome	Centre de Biologie pour la Gestion des Populations (CBGP - UMR1062)	SAMEA3209382	GCA_001242845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/845/GCA_001242845.1_Wobs_v01	-	obscurior
Pseudomonas sp. MS586	1785145	PRJNA309549	309549	Proteobacteria	Gammaproteobacteria	6.24773	60.5	chromosome:NZ_CP014205.1/CP014205.1	-	1	5686	5527	3/21/16	4/17/17	Complete Genome	Mississippi state university	SAMN04435621	GCA_001594225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/225/GCA_001594225.1_ASM159422v1	-	MS586
Pseudorhodobacter aquimaris	687412	PRJNA286976	286976	Proteobacteria	Alphaproteobacteria	3.81844	58.7	-	LGHS01	77	3770	3470	8/4/15	4/16/17	Contig	Korea Polar Research Institute	SAMN03785585	GCA_001202025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/025/GCA_001202025.1_ASM120202v1	-	KCTC 23043
Aestuariivita atlantica	1317121	PRJNA274204	274204	Proteobacteria	Alphaproteobacteria	4.34264	65.5	-	AQQZ01	56	4251	4139	8/4/15	4/10/17	Contig	 Third Institute of Oceanography	SAMN03323757	GCA_001205715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/715/GCA_001205715.1_ASM120571v1	-	22II-S11-z3
Candidatus Burkholderia brachyanthoides	1090379	PRJNA253362	253362	Proteobacteria	Betaproteobacteria	3.54553	61.2	-	LFJI01	684	4067	1782	8/5/15	8/5/15	Scaffold	University of Zurich	SAMN03776717	GCA_001235855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/855/GCA_001235855.1_ASM123585v1	-	UZHbot7
Vibrio lentus	136468	PRJNA287868	287868	Proteobacteria	Gammaproteobacteria	5.11747	43.5	-	LFQI01	73	4536	4395	8/5/15	4/10/17	Contig	University of Malaya	SAMN03793181	GCA_001238475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/475/GCA_001238475.1_ASM123847v1	-	BSW13
Pseudorhodobacter wandonensis	1120568	PRJNA286976	286976	Proteobacteria	Alphaproteobacteria	3.88744	57.8	-	LGHT01	45	3770	3610	8/4/15	4/10/17	Contig	Korea Polar Research Institute	SAMN03785586	GCA_001202035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/035/GCA_001202035.1_ASM120203v1	-	KCTC 23672
Pseudorhodobacter antarcticus	1077947	PRJNA286976	286976	Proteobacteria	Alphaproteobacteria	3.88102	59.1	-	LGHU01	129	3906	3589	8/4/15	4/10/17	Contig	Korea Polar Research Institute	SAMN03785587	GCA_001202015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/015/GCA_001202015.1_ASM120201v1	-	KCTC 23700
Candidatus Stoquefichus sp. SB1	1658109	PRJEB9509	288394	Terrabacteria group	Firmicutes	3.59419	30.9	-	CVRO01	6	3589	3463	6/27/15	4/10/17	Scaffold	URMITE	SAMEA3442603	GCA_001244545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/545/GCA_001244545.1_Stoquefichus_jeddahense	-	SB1
Intestinimonas sp. UBA1698	1946651	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.44167	62.7	-	DCJO01	44	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453403	GCA_002320075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/075/GCA_002320075.1_ASM232007v1	28894102	-
Mycobacterium neworleansense	146018	PRJEB9831	289474	Terrabacteria group	Actinobacteria	6.28732	66.8	-	CWKH01	9	6063	5838	7/13/15	8/1/17	Contig	URMITE	SAMEA3481574	GCA_001245615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/615/GCA_001245615.1_Mycobacterium_neworleansense_assembly_1	-	type strain: ATCC 49404
Gallaecimonas pentaromativorans	584787	PRJNA288254	288254	Proteobacteria	Gammaproteobacteria	4.32084	58.3	-	LFWC01	78	4064	3951	8/5/15	4/16/17	Contig	85303	SAMN03797428	GCA_001247655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/655/GCA_001247655.1_ASM124765v1	-	YA_1
Roseovarius tolerans	74031	PRJEB16877	351006	Proteobacteria	Alphaproteobacteria	3.77497	63.1	-	FOBO01	46	3759	3606	10/29/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488077	GCA_900109855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/855/GCA_900109855.1_IMG-taxon_2619619026_annotated_assembly	-	DSM 11457
Nautella italica	481446	PRJEB9394	290268	Proteobacteria	Alphaproteobacteria	4.04957	59.9	-	CVRM01	37	3829	3725	7/19/15	4/10/17	Contig	UVEG	SAMEA3393043	GCA_001258055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/055/GCA_001258055.1_N.italicaCECT7645_Prokka	-	CECT 7645
Dysgonomonas sp. HGC4	1658009	PRJEB9421	290454	FCB group	Bacteroidetes/Chlorobi group	4.49414	35.9	-	CVRU01	196	3666	3559	7/22/15	6/12/17	Scaffold	UCONNMISEQ	SAMEA3432783	GCA_001261715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/715/GCA_001261715.1_HGC4_v3	-	HGC4
Aestuariivita boseongensis	1470562	PRJNA274322	274322	Proteobacteria	Alphaproteobacteria	3.94432	61.1	-	JXYH01	146	3907	3772	8/6/15	4/10/17	Contig	Third Institute of Oceanography	SAMN03325920	GCA_001262635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/635/GCA_001262635.1_ASM126263v1	-	BS-B2
Corynebacterium lactis RW2-5	1408189	PRJNA222474	222474	Terrabacteria group	Actinobacteria	2.76974	60.5	chromosome:NZ_CP006841.1/CP006841.1	-	1	2470	2358	8/26/15	4/11/17	Complete Genome	Bielefeld University	SAMN04012704	GCA_001274895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/274/895/GCA_001274895.1_ASM127489v1	-	RW2-5
Aeromonas hydrophila NJ-35	1416915	PRJNA226230	226230	Proteobacteria	Gammaproteobacteria	5.27964	60.5	chromosome:NZ_CP006870.1/CP006870.1	-	1	4902	4647	6/3/15	4/3/17	Complete Genome	Nanjing Agricultural University	SAMN03744001	GCA_001019645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/645/GCA_001019645.1_ASM101964v1	26014286	NJ-35
Bifidobacterium animalis subsp. lactis	302911	PRJNA252546	252546	Terrabacteria group	Actinobacteria	1.93862	60.5	chromosome:NZ_CP009045.1/CP009045.1	-	1	1656	1576	1/14/15	4/2/17	Complete Genome	Suranaree University of Technology	SAMN02941905	GCA_000818055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/055/GCA_000818055.1_ASM81805v1	-	BF052
Acetobacterium bakii	52689	PRJNA290539	290539	Terrabacteria group	Firmicutes	4.13563	41.2	-	LGYO01	90	3871	3731	8/7/15	4/16/17	Scaffold	Korean Advanced Institute of Science and Technology	SAMN03892803	GCA_001263355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/355/GCA_001263355.1_ASM126335v1	26404601	DSM 8239
Thermincola ferriacetica	281456	PRJNA289023	289023	Terrabacteria group	Firmicutes	3.17873	45.7	-	LGTE01	78	3182	3048	8/10/15	4/16/17	Scaffold	Swette Center for Environmental Biotechnology	SAMN03840759	GCA_001263415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/415/GCA_001263415.1_ASM126341v1	26404602	Z-0001
Corynebacterium riegelii	156976	PRJNA290807	290807	Terrabacteria group	Actinobacteria	2.56372	60.5	chromosome:NZ_CP012342.1/CP012342.1	-	1	2424	2307	8/10/15	4/16/17	Chromosome	UCSF	SAMN03897721	GCA_001263755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/755/GCA_001263755.1_ASM126375v1	-	PUDD_83A45
Clostridium homopropionicum DSM 5847	1121318	PRJNA292072	292072	Terrabacteria group	Firmicutes	3.65054	31.1	-	LHUR01	48	3569	3391	8/10/15	4/10/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03964616	GCA_001263795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/795/GCA_001263795.1_ASM126379v1	26430034	DSM 5847
Bifidobacterium animalis	28025	PRJNA271239	271239	Terrabacteria group	Actinobacteria	1.95865	60.5	chromosome:NZ_CP010433.1/CP010433.1	-	1	1674	1584	1/9/15	4/10/17	Complete Genome	China Agricultural University	SAMN03273367	GCA_000817045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/045/GCA_000817045.1_ASM81704v1	-	A6
Anaeromassilibacillus senegalensis	1673717	PRJEB9776	288876	Terrabacteria group	Firmicutes	3.51175	52.9	-	CWIP01	12	3099	3000	7/3/15	4/10/17	Scaffold	URMITE	SAMEA3750678	GCA_001261775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/775/GCA_001261775.1_Anaeromassilibacillus_senegalense	-	mt9
Bifidobacterium animalis subsp. lactis KLDS2.0603	1316911	PRJNA225662	225662	Terrabacteria group	Actinobacteria	1.9469	60.5	chromosome:NZ_CP007522.1/CP007522.1	-	1	1663	1569	1/7/15	4/2/17	Complete Genome	Northeast Agricultural University in People's Republic of China	SAMN02726251	GCA_000816205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/205/GCA_000816205.1_ASM81620v1	-	KLDS2.0603
Wolbachia endosymbiont of Operophtera brumata	1620420	PRJNA276497	276497	Proteobacteria	Alphaproteobacteria	1.12105	34.1	-	JYPC01	120	1110	952	8/11/15	4/10/17	Scaffold	Wageningen University	SAMN03375746	GCA_001266585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/585/GCA_001266585.1_ASM126658v1	26227816	Ob_Wba
Marinobacter subterrani	1658765	PRJNA284629	284629	Proteobacteria	Gammaproteobacteria	4.45361	58.9	-	LFBU01	2	4222	4050	7/2/15	4/10/17	Contig	University of Minnesota	SAMN03731189	GCA_001045555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/555/GCA_001045555.1_ASM104555v1	-	JG233
Bifidobacterium coryneforme	1687	PRJNA239194	239194	Terrabacteria group	Actinobacteria	1.75515	60.5	chromosome:NZ_CP007287.1/CP007287.1	-	1	1430	1352	8/5/14	4/9/17	Complete Genome	University of Parma	SAMN02666223	GCA_000737865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/865/GCA_000737865.1_ASM73786v1	25085493	LMG18911
Bifidobacterium indicum LMG 11587 = DSM 20214	1341694	PRJNA206546	206546	Terrabacteria group	Actinobacteria	1.73455	60.5	chromosome:NZ_CP006018.1/CP006018.1	-	1	1412	1327	6/13/14	4/9/17	Complete Genome	University of Parma	SAMN05771123	GCA_000706765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/765/GCA_000706765.1_ASM70676v1	25085493	LMG 11587
Erwinia iniecta	1560201	PRJNA263303	263303	Proteobacteria	Gammaproteobacteria	4.78353	52.8	-	JRXE01	92	4402	4133	8/14/15	4/10/17	Scaffold	Colorado State University	SAMN03098356	GCA_001267535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/535/GCA_001267535.1_ASM126753v1	26198254	B120
candidate division Zixibacteria bacterium RBG-1	1379698	PRJNA208744	208744	FCB group	candidate division Zixibacteria	2.12277	41.9	-	AUYT01	1	1906	1906	8/14/13	1/8/14	Contig	"University of California, Berkeley"	SAMN02471618	GCA_000447245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/245/GCA_000447245.1_RBG_1	-	-
Roseivirga sp. UBA838	1947393	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.23834	43.5	-	DBHC01	53	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06454051	GCA_002296035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/035/GCA_002296035.1_ASM229603v1	28894102	-
Pseudomonas thivervalensis	86265	PRJEB15833	347748	Proteobacteria	Gammaproteobacteria	6.60408	61.2	chromosome I:NZ_LT629691.1/LT629691.1	-	1	5895	5687	10/20/16	4/13/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04490204	GCA_900102295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/295/GCA_900102295.1_IMG-taxon_2639762509_annotated_assembly	-	BS3779
Streptomyces azureus	146537	PRJDB3912	291492	Terrabacteria group	Actinobacteria	8.79021	70.9	-	BBYS01	350	8250	7460	7/29/15	3/11/17	Scaffold	"Microbial Genetics Division, Institute of Genetic Resources, Faculty of Agriculture, Kyushu University"	SAMD00031377	GCA_001270025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/025/GCA_001270025.1_Sazu_1.0	26494661	ATCC 14921
Bacteroidales bacterium 6E	1688776	PRJDB4072	290874	FCB group	Bacteroidetes/Chlorobi group	4.43	45.5	-	BBZD01	61	3598	3475	8/13/15	4/10/17	Contig	National Institute of Advanced Industrial Science and Technology (AIST)	SAMD00035483	GCA_001270045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/045/GCA_001270045.1_ASM127004v1	26450736	6E
Streptomyces antibioticus	1890	PRJNA291306	291306	Terrabacteria group	Actinobacteria	8.50662	71.7823	chromosome:NZ_CM007717.1/CM007717.1	LHQL01	5	7668	7364	3/3/17	3/29/17	Chromosome	Bielefeld University	SAMN03941256	GCA_002019855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/855/GCA_002019855.1_ASM201985v1	-	DSM 41481
Jiangella muralis	702383	PRJNA288523	288523	Terrabacteria group	Actinobacteria	7.26616	72.3	-	LFXL01	76	6577	6394	8/19/15	4/16/17	Scaffold	Yunnan Institute of Microbiology	SAMN03801508	GCA_001270745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/745/GCA_001270745.1_ASM127074v1	-	DSM 45357
Sunxiuqinia dokdonensis	1409788	PRJNA263321	263321	FCB group	Bacteroidetes/Chlorobi group	4.96283	45.5	-	LGIA01	225	4295	4114	8/19/15	4/18/17	Contig	KRIBB	SAMN03107533	GCA_001270965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/965/GCA_001270965.1_ASM127096v1	24385350	DH1
miscellaneous Crenarchaeota group-1 archaeon SG8-32-1	1685124	PRJNA270657	270657	TACK group	Candidatus Bathyarchaeota	1.07846	36.7	-	LFWU01	164	1234	1117	8/21/15	5/8/17	Contig	University of Texas	SAMN03793025	GCA_001273345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/345/GCA_001273345.1_ASM127334v1	26626228	-
miscellaneous Crenarchaeota group-1 archaeon SG8-32-3	1685125	PRJNA270657	270657	TACK group	Candidatus Bathyarchaeota	0.668322	44	-	LFWV01	47	704	640	8/21/15	5/8/17	Contig	University of Texas	SAMN03793026	GCA_001273335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/335/GCA_001273335.1_ASM127333v1	26626228	-
miscellaneous Crenarchaeota group archaeon SMTZ1-55	1685133	PRJNA270657	270657	TACK group	Candidatus Bathyarchaeota	1.257	55	-	LFWX01	128	1283	1122	8/21/15	5/8/17	Scaffold	University of Texas	SAMN03793028	GCA_001273375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/375/GCA_001273375.1_ASM127337v1	26626228	-
miscellaneous Crenarchaeota group-6 archaeon AD8-1	1685126	PRJNA270657	270657	TACK group	Candidatus Bathyarchaeota	1.58381	32.4	-	LFWW01	83	1697	1505	8/21/15	5/8/17	Contig	University of Texas	SAMN03793027	GCA_001273385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/385/GCA_001273385.1_ASM127338v1	26626228	-
miscellaneous Crenarchaeota group-15 archaeon DG-45	1685127	PRJNA270657	270657	TACK group	Candidatus Bathyarchaeota	1.42327	62.1	-	LFWZ01	77	1495	1314	8/21/15	5/8/17	Scaffold	University of Texas	SAMN03793030	GCA_001273415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/415/GCA_001273415.1_ASM127341v1	26626228	-
miscellaneous Crenarchaeota group archaeon SMTZ-80	1685135	PRJNA270657	270657	TACK group	Candidatus Bathyarchaeota	1.51019	34.5	-	LFWY01	60	1493	1369	8/21/15	5/8/17	Contig	University of Texas	SAMN03793029	GCA_001273495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/495/GCA_001273495.1_ASM127349v1	26626228	-
Bacillus butanolivorans	421767	PRJNA291104	291104	Terrabacteria group	Firmicutes	5.68234	38	-	LGYA01	17	5412	5083	8/24/15	4/16/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN03940003	GCA_001273755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/755/GCA_001273755.1_ASM127375v1	26494675	DSM 18926
Bifidobacterium animalis	28025	PRJNA245929	245929	Terrabacteria group	Actinobacteria	1.93106	60.5	chromosome:NZ_CP007755.1/CP007755.1	-	1	1654	1576	5/27/14	4/2/17	Complete Genome	China Agricultural University	SAMN02797738	GCA_000695895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/895/GCA_000695895.1_ASM69589v1	-	RH
Pseudomonas brassicacearum	930166	PRJNA239581	239581	Proteobacteria	Gammaproteobacteria	6.6524	60.5	chromosome:NZ_CP007410.1/CP007410.1	-	1	5884	5643	3/7/14	4/2/17	Complete Genome	University of Manitoba	SAMN02666520	GCA_000585995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/995/GCA_000585995.1_ASM58599v1	24812222	DF41
Sporosarcina globispora	1459	PRJNA291106	291106	Terrabacteria group	Firmicutes	5.67395	40.5	-	LGUF01	21	5672	5251	8/26/15	4/11/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN03940005	GCA_001274725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/274/725/GCA_001274725.1_ASM127472v1	26494677	DSM 4
Bacillus murimartini	171685	PRJNA291109	291109	Terrabacteria group	Firmicutes	4.16914	43.4	-	LGUH01	13	4207	4120	8/26/15	11/16/15	Contig	Fujian Academy of Agricultural Sciences	SAMN03940011	GCA_001274705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/274/705/GCA_001274705.1_ASM127470v1	26494676	LMG21005
Vibrio hepatarius	171383	PRJNA290060	290060	Proteobacteria	Gammaproteobacteria	4.82271	46.2	-	LHPI01	88	4510	4363	8/26/15	4/16/17	Contig	Technical University of Denmark	SAMN03951930	GCA_001274785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/274/785/GCA_001274785.1_ASM127478v1	-	DSM 19134
Vibrio xuii	170661	PRJNA291738	291738	Proteobacteria	Gammaproteobacteria	6.2979	44.7	-	LHPK01	3243	7476	7324	8/26/15	8/26/15	Contig	Technical University of Denmark	SAMN03952450	GCA_001274855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/274/855/GCA_001274855.1_ASM127485v1	-	DSM 17185
Pseudomonas sp. TKP	1415630	PRJNA225946	225946	Proteobacteria	Gammaproteobacteria	7.01267	60.5	chromosome:NC_023064.1/CP006852.1	-	1	6407	6186	12/16/13	4/9/17	Complete Genome	Tohoku University	SAMN02389528	GCA_000508205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/205/GCA_000508205.1_ASM50820v1	24482516	TKP
Bacillus okuhidensis	136160	PRJNA293253	293253	Terrabacteria group	Firmicutes	4.20535	43.6	-	LILD01	30	4057	3892	8/26/15	4/16/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN03999407	GCA_001274915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/274/915/GCA_001274915.1_ASM127491v1	-	DSM 13666
Jeotgalibacillus marinus	86667	PRJNA293247	293247	Terrabacteria group	Firmicutes	4.09976	43.8	-	LILA01	18	4183	4010	8/26/15	4/16/17	Contig	Fujian Academy of Agricultural Sciences	SAMN03999404	GCA_001274925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/274/925/GCA_001274925.1_ASM127492v1	-	DSM 1297
Bacillus koreensis	284581	PRJNA293250	293250	Terrabacteria group	Firmicutes	4.60358	40.1	-	LILC01	42	4722	4561	8/26/15	4/16/17	Contig	Fujian Academy of Agricultural Sciences	SAMN03999406	GCA_001274935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/274/935/GCA_001274935.1_ASM127493v1	-	DSM 16467
Viridibacillus arvi	263475	PRJNA293249	293249	Terrabacteria group	Firmicutes	4.75857	35.5	-	LILB01	19	4577	4414	8/26/15	4/16/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN03999405	GCA_001274945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/274/945/GCA_001274945.1_ASM127494v1	-	DSM 16317
Hapalosiphon sp. MRB220	1704290	PRJNA293405	293405	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.42972	40.2	-	LIRN01	115	6300	5932	8/27/15	4/11/17	Scaffold	Singapore-MIT Alliance for Research and Technology	SAMN04002543	GCA_001275395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/395/GCA_001275395.1_ASM127539v1	-	MRB220
Achromatium sp. WMS2	1604835	PRJNA273490	273490	Proteobacteria	Gammaproteobacteria	2.81355	43.3	-	JXSN01	777	2690	2203	8/31/15	9/1/15	Contig	Pennsylvania State University	SAMN03292484	GCA_001276605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/605/GCA_001276605.1_ASM127660v1	26322031	-
Planktothricoides sp. SR001	1705388	PRJNA293643	293643	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.0667	43.5	-	LIUQ01	165	5921	5461	8/31/15	4/11/17	Scaffold	Singapore-MIT Alliance for Research and Technology	SAMN04009103	GCA_001276715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/715/GCA_001276715.1_ASM127671v1	-	SR001
Candidatus Phytoplasma pruni	479893	PRJNA283111	283111	Terrabacteria group	Tenericutes	0.598511	27.2	-	LHCF01	46	580	430	9/1/15	4/17/17	Contig	Beltsville Agricultural Research Center	SAMN03603757	GCA_001277135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/135/GCA_001277135.1_ASM127713v1	26472824	CX
Gloeobacter kilaueensis JS1	1183438	PRJNA162637	162637	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.72479	60.5	chromosome:NC_022600.1/CP003587.1	-	1	4448	4336	10/28/13	4/9/17	Complete Genome	University of Hawaii at Manoa	SAMN02604186	GCA_000484535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/535/GCA_000484535.1_ASM48453v1	24194836	JS1
Flavobacterium akiainvivens	1202724	PRJNA294108	294108	FCB group	Bacteroidetes/Chlorobi group	4.53302	43.8	-	LIYD01	5	4076	3978	9/2/15	4/11/17	Scaffold	University of Hawaii at Manoa	SAMN04015015	GCA_001278115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/115/GCA_001278115.1_ASM127811v1	26494668	IK-1
Bifidobacterium animalis subsp. lactis Bl12	1281781	PRJNA186412	186412	Terrabacteria group	Actinobacteria	1.93861	60.5	chromosome:NC_021593.1/CP004053.1	-	1	1656	1574	6/25/13	4/1/17	Complete Genome	University of Parma	SAMN02604238	GCA_000414215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/215/GCA_000414215.1_ASM41421v1	23645200	Bl12
Lysinibacillus contaminans	1293441	PRJNA288620	288620	Terrabacteria group	Firmicutes	4.10031	37.4	-	LGRV01	9	3926	3765	9/4/15	4/11/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN03835250	GCA_001278945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/945/GCA_001278945.1_ASM127894v1	-	DSM 25560
Streptomyces caelestis	36816	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.62216	72.4	-	LGCN01	288	7711	7101	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900596	GCA_001279005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/005/GCA_001279005.1_ASM127900v1	-	NRRL B-24567
Asanoa ferruginea	53367	PRJNA238534	238534	Terrabacteria group	Actinobacteria	6.95732	71.1	-	LGEJ01	251	6514	6190	9/4/15	4/16/17	Contig	University of Illinois	SAMN03327477	GCA_001280145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/145/GCA_001280145.1_ASM128014v1	-	NRRL B-16430
Streptomyces purpurogeneiscleroticus	68259	PRJNA238534	238534	Terrabacteria group	Actinobacteria	6.97395	69.4	-	LGEI01	440	6574	6184	9/4/15	3/11/17	Contig	University of Illinois	SAMN03327482	GCA_001280155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/155/GCA_001280155.1_ASM128015v1	-	NRRL B-2952
Cobetia amphilecti	1055104	PRJNA259325	259325	Proteobacteria	Gammaproteobacteria	3.96501	62.5	-	JQJA01	97	3361	3209	9/11/14	4/17/17	Contig	"G.B. Elyakov Pacific Institute of Bioorganic Chemistry, Far Eastern Branch, Russian Academy of Sciences"	SAMN03003781	GCA_000754225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/225/GCA_000754225.1_ASM75422v1	-	KMM 296
Euryhalocaulis caribicus	1161401	PRJNA201651	201651	Proteobacteria	Alphaproteobacteria	3.32309	63.9	-	ASJA01	39	3243	3147	6/18/13	4/8/17	Contig	Xiamen University	SAMN02053529	GCA_000412185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/185/GCA_000412185.1_jl2009	23929464	JL2009
Nosocomiicoccus massiliensis	1232430	PRJEB644	181977	Terrabacteria group	Firmicutes	1.50973	36.5	-	CAVG01	154	1623	1479	6/13/13	4/8/17	Contig	URMITE	SAMEA2272510	GCA_000438455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/455/GCA_000438455.1_Nosocomiicoccus_NP2_v1	-	NP2
Megasphaera massiliensis	1232428	PRJEB645	181976	Terrabacteria group	Firmicutes	2.73749	50.2	-	CAVO01	28	2560	2363	6/4/13	4/8/17	Scaffold	URMITE	SAMEA2271970	GCA_000455225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/225/GCA_000455225.1_Megasphaera_massiliensis	-	NP3
Halopiger goleimassiliensis	1293048	PRJEB1780	208026	Euryarchaeota	Halobacteria	3.90636	66.1	-	CBMB01	3	3806	3705	6/18/13	4/17/17	Scaffold	URMITE	SAMEA2272090	GCA_000455345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/345/GCA_000455345.1_Halgo	-	IIH3
Halopiger djelfimassiliensis	1293047	PRJEB1777	208025	Euryarchaeota	Halobacteria	3.77655	64.2	-	CBMA01	6	3720	3560	6/18/13	4/17/17	Scaffold	URMITE	SAMEA2272053	GCA_000455365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/365/GCA_000455365.1_HdjelfamassiliensisIIH2	-	IIH2
Bacillus massiliogorillae	1243664	PRJEB623	179333	Terrabacteria group	Firmicutes	5.45107	35	-	CAVL02	12	5191	4977	4/18/13	4/9/17	Scaffold	URMITE	SAMEA2272460	GCA_000380245.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/245/GCA_000380245.2_ASM38024v2	-	G2
[Clostridium] dakarense	1301100	PRJEB1853	205011	Terrabacteria group	Firmicutes	3.73576	28	-	CBTZ01	257	3661	3362	10/15/13	4/9/17	Scaffold	URMITE	SAMEA3138818	GCA_000499525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/525/GCA_000499525.1_Clostridium_dakarense_01	-	FF1
Mangrovimonas sp. ST2L12	1645915	PRJNA281691	281691	FCB group	Bacteroidetes/Chlorobi group	3.82724	38.3	-	LBIP01	42	3333	3262	9/9/15	4/11/17	Contig	UNIVERSITI SAINS MALAYSIA	SAMN03494314	GCA_001280435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/435/GCA_001280435.1_ASM128043v1	-	ST2L12
Pantoea septica	472695	PRJNA252991	252991	Proteobacteria	Gammaproteobacteria	4.30872	58.7	-	MLJJ01	89	4123	3898	4/18/17	4/21/17	Contig	University of Pretoria	SAMN05915835	GCA_002095575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/575/GCA_002095575.1_ASM209557v1	28255640	LMG 5345
Caballeronia cordobensis	1353886	PRJEB12481	309803	Proteobacteria	Betaproteobacteria	8.2081	63.7	-	FCNY02	74	7613	7428	1/28/16	5/31/17	Contig	LM-UGent	SAMEA3731257	GCA_001544575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/575/GCA_001544575.2_ASM154457v2	-	-
Bartonella florencae	928210	PRJEB228	171825	Proteobacteria	Alphaproteobacteria	2.05351	38.7	-	CALU01	89	1843	1627	8/17/12	4/17/17	Scaffold	URMITE	SAMEA2272606	GCA_000312525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/525/GCA_000312525.1_ASM31252v1	-	R4
Photorhabdus heterorhabditis	880156	PRJNA294361	294361	Proteobacteria	Gammaproteobacteria	4.87892	42.2	-	LJCS01	262	4355	3971	9/10/15	4/16/17	Contig	University of Witwatersrand	SAMN04023336	GCA_001280945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/945/GCA_001280945.1_ASM128094v1	26514768	VMG
Lachnospiraceae oral taxon 107 str. F0167	575593	PRJNA42531	42531	Terrabacteria group	Firmicutes	3.2881	35.7	-	ADDS01	70	3062	2774	4/25/11	4/17/17	Scaffold	Broad Institute	SAMN02595376	GCA_000209465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/209/465/GCA_000209465.1_Lach_bact_F0167_V1	-	F0167
Bifidobacterium animalis subsp. lactis B420	1168290	PRJNA156973	156973	Terrabacteria group	Actinobacteria	1.9386	60.5	chromosome:NC_017866.1/CP003497.1	-	1	1613	1538	5/7/12	7/25/17	Complete Genome	DuPont	SAMN02603214	GCA_000277325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/325/GCA_000277325.1_ASM27732v1	22815448	B420
Lactobacillus apinorum	1218495	PRJNA270968	270968	Terrabacteria group	Firmicutes	1.46024	34.9	-	JXCT01	9	1372	1301	9/11/15	4/16/17	Scaffold	Uppsala university	SAMN03275710	GCA_001281175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/175/GCA_001281175.1_ASM128117v1	25953738	Fhon13
Anaerococcus provencensis	938293	PRJEB85	169194	Terrabacteria group	Firmicutes	2.26594	33.7	-	CAJU02	8	2147	2001	6/14/12	8/22/17	Scaffold	URMITE	SAMEA2272478	GCA_000312365.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/365/GCA_000312365.2_ASM31236v2	-	9402080
Bifidobacterium animalis subsp. lactis Bi-07	742729	PRJNA156975	156975	Terrabacteria group	Actinobacteria	1.93882	60.5	chromosome:NC_017867.1/CP003498.1	-	1	1611	1538	5/7/12	7/25/17	Complete Genome	DuPont	SAMN02603215	GCA_000277345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/345/GCA_000277345.1_ASM27734v1	22815448	Bi-07
Bifidobacterium animalis subsp. animalis ATCC 25527	703613	PRJNA41423	41423	Terrabacteria group	Actinobacteria	1.93269	60.5	chromosome:NC_017834.1/CP002567.1	-	1	1626	1483	4/30/12	3/30/17	Complete Genome	"Penn State University, Department of Food Science"	SAMN02603717	GCA_000260715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/715/GCA_000260715.1_ASM26071v1	22118077	ATCC 25527
Bifidobacterium animalis subsp. lactis BLC1	1075106	PRJNA71815	71815	Terrabacteria group	Actinobacteria	1.93858	60.5	chromosome:NC_017216.2/CP003039.2	-	1	1657	1578	9/1/11	4/1/17	Complete Genome	University of Parma Sacco srl	SAMN02604239	GCA_000224965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/965/GCA_000224965.2_ASM22496v2	22038957	BLC1
Lysinibacillus macroides	33935	PRJNA289601	289601	Terrabacteria group	Firmicutes	4.86604	37.9	-	LGCI01	15	4739	4424	9/14/15	4/16/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN03856077	GCA_001281525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/525/GCA_001281525.1_ASM128152v1	26543111	DSM 54
bacterium 336/3	1664068	PRJNA285747	285747	FCB group	Bacteroidetes/Chlorobi group	4.71474	32.6	-	LJIE01	13	4392	4295	9/14/15	4/11/17	Scaffold	"University of Turku, Department of Biochemistry"	SAMN03837832	GCA_001281695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/695/GCA_001281695.1_ASM128169v1	-	336/3
Lascolabacillus massiliensis	1627894	PRJEB8934	279371	FCB group	Bacteroidetes/Chlorobi group	2.82472	37	-	CTEJ01	2	2370	2293	3/25/15	4/11/17	Contig	URMITE	SAMEA3312814	GCA_001282625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/625/GCA_001282625.1_Lascolabacillus_massiliensis	-	SIT8
Clostridiales bacterium mt11	1686289	PRJEB9657	288395	Terrabacteria group	Firmicutes	3.56882	31.5	-	CXYU01	16	3482	3330	8/8/15	4/11/17	Scaffold	URMITE	SAMEA3500982	GCA_001282665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/665/GCA_001282665.1_Mediannikovella_massiliensis	-	mt11
Niameybacter massiliensis	1658108	PRJEB10271	292678	Terrabacteria group	Firmicutes	4.57867	34.3	-	CXYW01	11	4272	4100	8/13/15	4/10/17	Scaffold	URMITE	SAMEA3501706	GCA_001282685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/685/GCA_001282685.1_Niameyia_massiliensis	-	Mt14
Candidatus Dorea massiliensis AP6	1211818	PRJEB374	172617	Terrabacteria group	Firmicutes	3.58416	28.4	-	CXYY01	36	3464	3198	8/14/15	4/11/17	Scaffold	URMITE	SAMEA3503350	GCA_001282705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/705/GCA_001282705.1_Dorea_massiliensis	-	AP6
Inediibacterium massiliense	1658111	PRJEB10289	292767	Terrabacteria group	Firmicutes	3.49728	30.4	-	CXYX01	14	3313	3155	8/14/15	9/20/15	Scaffold	URMITE	SAMEA3502534	GCA_001282725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/725/GCA_001282725.1_Malnutritionisia_massiliensis	-	Mt12
Halolamina sp. CBA1230	1853690	PRJNA378126	378126	Euryarchaeota	Halobacteria	3.47252	66.8	-	MWUK01	5	3553	3389	3/13/17	3/15/17	Contig	Korea Basic Science Institute	SAMN06480072	GCA_002025255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/255/GCA_002025255.1_ASM202525v1	-	CBA1230
Helicobacter ailurogastricus	1578720	PRJEB7933	293179	Proteobacteria	delta/epsilon subdivisions	1.5784	47.6	-	CDMG01	9	1564	1472	8/17/15	4/11/17	Scaffold	UGENT	SAMEA3172283	GCA_001282945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/945/GCA_001282945.1_gastric_feline_helicobacters	-	-
Bifidobacterium animalis subsp. lactis CNCM I-2494	1042403	PRJNA67865	67865	Terrabacteria group	Actinobacteria	1.94311	60.5	chromosome:NC_017215.1/CP002915.1	-	1	1658	1576	7/18/11	3/30/17	Complete Genome	Washington University School of Medicine Center for Genome Sciences and Systems Biology	SAMN02604350	GCA_000220885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/885/GCA_000220885.1_ASM22088v1	21914878	CNCM I-2494
Photobacterium galatheae	1654360	PRJNA242743	242743	Proteobacteria	Gammaproteobacteria	4.53314	49.5	-	JMIB01	80	4126	3986	5/20/14	4/9/17	Contig	Technical University of Denmark	SAMN02729099	GCA_000695255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/255/GCA_000695255.1_Phalotolerans2753	24926051	S2753
Candidatus Magnetomorum sp. HK-1	1509431	PRJNA252699	252699	Proteobacteria	delta/epsilon subdivisions	14.2904	34.6	-	JPDT01	3036	11071	11022	9/16/15	9/16/15	Contig	Ludwig-Maximilians-Universitaet Munich	SAMN02854536	GCA_001292585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/585/GCA_001292585.1_SAG5	-	-
Marinagarivorans algicola	1513270	PRJNA289034	289034	Proteobacteria	Gammaproteobacteria	4.05783	45.1	-	LGAK01	113	3306	3161	9/16/15	4/11/17	Contig	Shandong University at Weihai	SAMN03840766	GCA_001292705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/705/GCA_001292705.1_ASM129270v1	-	Z1
Bifidobacterium animalis subsp. lactis V9	573236	PRJNA32515	32515	Terrabacteria group	Actinobacteria	1.94405	60.5	chromosome:NC_017217.1/CP001892.1	-	1	1658	1578	5/5/10	3/30/17	Complete Genome	"The Key Laboratory of Dairy Biotechnology and Bioengineering, Education Ministry of P. R. China, Department of Food Science and Engineering, Inner Mongolia Agricultural University, China"	SAMN02603934	GCA_000092765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/765/GCA_000092765.1_ASM9276v1	20511504	V9
Ardenticatena maritima	872965	PRJDB4052	292168	Terrabacteria group	Chloroflexi	3.56937	59.6	-	BBZA01	308	3211	2796	8/6/15	4/11/17	Scaffold	RIKEN Center for Sustainable Resource Science	SAMD00035849	GCA_001293545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/545/GCA_001293545.1_ASM129354v1	26430053	110S
Desulfatitalea tepidiphila	1185843	PRJDB4181	293967	Proteobacteria	delta/epsilon subdivisions	5.61448	56.7	-	BCAG01	7	4971	4858	8/28/15	4/16/17	Contig	"The Institute of Low Temperature Science, Hokkaido University"	SAMD00039863	GCA_001293685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/685/GCA_001293685.1_ASM129368v1	26564045	S28bF
Lactobacillus gorillae	1450649	PRJDB4156	294679	Terrabacteria group	Firmicutes	1.64162	48.1	-	BCAH01	63	1626	1525	9/1/15	7/29/17	Contig	"Animal Science, Graduate School of Life and Environmental Sciences, Kyoto Prefectural University"	SAMD00038621	GCA_001293735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/735/GCA_001293735.1_LgorillaeKZ01T_1.0	26472838	KZ01
Bifidobacterium animalis subsp. lactis BB-12	552531	PRJNA42883	42883	Terrabacteria group	Actinobacteria	1.9422	60.5	chromosome:NC_017214.1/CP001853.1	-	1	1659	1563	2/19/10	3/30/17	Complete Genome	Chr. Hansen A/S	SAMN02603131	GCA_000025245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/245/GCA_000025245.1_ASM2524v1	20190051	BB-12
Amantichitinum ursilacus	857265	PRJNA279226	279226	Proteobacteria	Betaproteobacteria	4.92895	60.1	-	LAQT01	38	4402	4310	9/18/15	4/16/17	Contig	Fraunhofer	SAMN03443696	GCA_001294205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/205/GCA_001294205.1_ASM129420v1	26586877	IGB-41
Streptomyces chattanoogensis	66876	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.1291	70.9	-	LGKG01	217	8187	7629	9/18/15	3/11/17	Contig	University of Illinois	SAMN03327492	GCA_001294335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/335/GCA_001294335.1_ASM129433v1	-	NRRL ISP-5002
Thermoactinomyces vulgaris	2026	PRJNA238534	238534	Terrabacteria group	Firmicutes	3.70406	51.3	-	LGKI01	1032	3403	3232	9/18/15	4/16/17	Contig	University of Illinois	SAMN03327489	GCA_001294365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/365/GCA_001294365.1_ASM129436v1	-	NRRL F-5595
Geobacter sp. M21	443144	PRJNA20729	20729	Proteobacteria	delta/epsilon subdivisions	4.74581	60.5	chromosome:NC_012918.1/CP001661.1	-	1	4199	4080	7/7/09	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000633	GCA_000023645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/645/GCA_000023645.1_ASM2364v1	-	M21
Pseudorhodobacter sp. PARRP1	2015560	PRJNA340070	340070	Proteobacteria	Alphaproteobacteria	4.35126	61.8	-	NKIU01	28	4221	4113	8/16/17	8/16/17	Scaffold	CNRS-AMU	SAMN07280673	GCA_002256245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/245/GCA_002256245.1_ASM225624v1	-	-
Bifidobacterium animalis subsp. lactis DSM 10140	555970	PRJNA32893	32893	Terrabacteria group	Actinobacteria	1.93848	60.5	chromosome:NC_012815.1/CP001606.1	-	1	1655	1572	6/19/09	3/30/17	Complete Genome	Danisco USA Inc.	SAMN02603171	GCA_000022965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/965/GCA_000022965.1_ASM2296v1	19376856	DSM 10140
Idiomarina abyssalis	86102	PRJNA288498	288498	Proteobacteria	Gammaproteobacteria	2.68481	47.2	-	LGOW01	68	2583	2501	9/18/15	4/11/17	Contig	University of New Hampshire at Manchester	SAMN03801268	GCA_001294685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/685/GCA_001294685.1_IdioAbyss1	26514763	KMM 227
Mycoplasma feriruminatoris	1179777	PRJNA175935	175935	Terrabacteria group	Tenericutes	1.01751	24.1	-	ANFU01	79	884	797	12/20/12	4/8/17	Scaffold	International Livestock Research Institute	SAMN01730980	GCA_000327395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/395/GCA_000327395.1_ASM32739v1	23469346	G5847
Alistipes inops	1501391	PRJNA260683	260683	FCB group	Bacteroidetes/Chlorobi group	2.30482	56.6	-	JRGF01	66	1995	1880	11/24/14	4/9/17	Contig	Pirogov Russian National Research Medical University	SAMN03025286	GCA_000786575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/575/GCA_000786575.1_ASM78657v1	26377180	627
Coprobacter secundus	1501392	PRJNA267485	267485	FCB group	Bacteroidetes/Chlorobi group	4.13874	37.8	-	JTDA01	45	3210	3057	12/17/14	6/12/17	Contig	Pirogov Russian National Research Medical University	SAMN03196437	GCA_000803105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/105/GCA_000803105.1_ASM80310v1	-	177
beta proteobacterium AAP99	1523428	PRJNA255566	255566	Proteobacteria	Betaproteobacteria	3.85852	65.4	-	LJIA01	31	3498	3407	9/22/15	4/11/17	Contig	"Institute of Microbiology, ASCR"	SAMN02927146	GCA_001295775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/775/GCA_001295775.1_ASM129577v1	-	AAP99
beta proteobacterium AAP65	1523424	PRJNA255561	255561	Proteobacteria	Betaproteobacteria	4.84319	69.6	-	LJHW01	95	4238	4138	9/22/15	4/11/17	Contig	"Institute of Microbiology, ASCR"	SAMN02927141	GCA_001295865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/865/GCA_001295865.1_ASM129586v1	-	AAP65
beta proteobacterium AAP121	1523431	PRJNA255570	255570	Proteobacteria	Betaproteobacteria	4.83781	69.5	-	LJID01	189	4284	4107	9/22/15	4/11/17	Contig	"Institute of Microbiology, ASCR"	SAMN02927153	GCA_001295855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/855/GCA_001295855.1_ASM129585v1	-	AAP121
beta proteobacterium AAP51	1523421	PRJNA178653	178653	Proteobacteria	Betaproteobacteria	5.10412	69.7	-	LJHT01	144	4407	4237	9/22/15	4/11/17	Contig	"Institute of Microbiology, ASCR"	SAMN02927138	GCA_001295905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/905/GCA_001295905.1_ASM129590v1	-	AAP51
alpha proteobacterium AAP81b	1523432	PRJNA255571	255571	Proteobacteria	Alphaproteobacteria	3.45004	68.5	-	LJHX01	207	3383	3164	9/22/15	4/11/17	Contig	"Institute of Microbiology, ASCR"	SAMN02927155	GCA_001295935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/935/GCA_001295935.1_ASM129593v1	-	AAP81b
alpha proteobacterium AAP38	1523418	PRJNA255551	255551	Proteobacteria	Alphaproteobacteria	5.78456	63.7	-	LJHR01	62	5060	4925	9/22/15	4/11/17	Contig	"Institute of Microbiology, ASCR"	SAMN02925443	GCA_001296005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/005/GCA_001296005.1_ASM129600v1	-	AAP38
Pseudomonas libanensis	75588	PRJEB16052	348513	Proteobacteria	Gammaproteobacteria	6.2632	60.1	chromosome I:NZ_LT629699.1/LT629699.1	-	1	5736	5475	10/20/16	4/13/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04490190	GCA_900101035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/035/GCA_900101035.1_IMG-taxon_2636416169_annotated_assembly	-	BS2975
Necropsobacter massiliensis	1400001	PRJEB4626	230345	Proteobacteria	Gammaproteobacteria	2.49236	46.2	-	CDON01	47	2366	2248	1/20/15	4/10/17	Contig	URMITE	SAMEA2820929	GCA_000827595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/827/595/GCA_000827595.1_Necropsobacter_senegalensis_FF6	-	FF6
Pseudoalteromonas porphyrae	187330	PRJNA289619	289619	Proteobacteria	Gammaproteobacteria	4.81172	39.9	-	LHPH01	111	4303	4055	9/24/15	4/11/17	Contig	Eisen Lab	SAMN03857200	GCA_001298125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/125/GCA_001298125.1_ASM129812v1	26988038	UCD-SED14
Idiomarina zobellii	86103	PRJNA291100	291100	Proteobacteria	Gammaproteobacteria	2.61893	47.1	-	LHSG01	86	2556	2429	9/18/15	4/11/17	Contig	University of New Hampshire - Manchester	SAMN03939991	GCA_001294745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/745/GCA_001294745.1_ASM129474v1	26514764	KMM 231
Oceanobacillus caeni	405946	PRJNA290433	290433	Terrabacteria group	Firmicutes	3.57909	35.7	-	LGTK01	209	3616	3273	9/24/15	4/16/17	Contig	Maharshi Dayanand University	SAMN03891616	GCA_001298135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/135/GCA_001298135.1_ASM129813v1	-	HM6
Bosea vaviloviae	1526658	PRJNA290830	290830	Proteobacteria	Alphaproteobacteria	5.60208	66.2	-	LGSZ01	98	5437	5245	9/24/15	4/11/17	Contig	Monash University Malaysia	SAMN03921824	GCA_001298265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/265/GCA_001298265.1_ASM129826v1	-	SD260
Nostoc piscinale CENA21	224013	PRJNA288507	288507	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.09456	40.5	chromosome:NZ_CP012036.1/CP012036.1	-	1	6172	5232	9/24/15	4/16/17	Chromosome	UCSD	SAMN03796038	GCA_001298445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/445/GCA_001298445.1_ASM129844v1	27034496	CENA21
Bifidobacterium animalis subsp. lactis Bl-04	580050	PRJNA32897	32897	Terrabacteria group	Actinobacteria	1.93871	60.5	chromosome:NC_012814.1/CP001515.1	-	1	1656	1575	6/19/09	3/30/17	Complete Genome	Danisco USA Inc.	SAMN02603172	GCA_000022705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/705/GCA_000022705.1_ASM2270v1	19376856	Bl-04; ATCC SD5219
Actinobacteria bacterium OV320	1592329	PRJNA271678	271678	Terrabacteria group	Actinobacteria	10.1386	71.1	-	LJCX01	38	9163	8650	9/24/15	4/11/17	Contig	Oak Ridge National Lab	SAMN03275776	GCA_001298545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/545/GCA_001298545.1_Actinobacteria.strain_OV320_v1.0	-	OV320
Actinobacteria bacterium OK006	1592326	PRJNA271673	271673	Terrabacteria group	Actinobacteria	11.9327	70.1	-	LJCU01	291	10801	9796	9/24/15	4/11/17	Contig	Oak Ridge National Lab	SAMN03275747	GCA_001298565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/565/GCA_001298565.1_Actinobacteria.strain_OK006_v1.0	-	OK006
Actinobacteria bacterium OV450	1592328	PRJNA271676	271676	Terrabacteria group	Actinobacteria	9.20205	71.9	-	LJCW01	390	8442	7744	9/24/15	4/11/17	Contig	Oak Ridge National Lab	SAMN03275775	GCA_001298555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/555/GCA_001298555.1_Actinobacteria.strain_OV450_v1.0	-	OV450
Actinobacteria bacterium OK074	1592327	PRJNA271675	271675	Terrabacteria group	Actinobacteria	10.6681	71.4	-	LJCV01	318	9147	8579	9/24/15	4/11/17	Contig	Oak Ridge National Lab	SAMN03275768	GCA_001298575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/575/GCA_001298575.1_Actinobacteria.strain_OK074_v1.0	-	OK074
Acidovorax caeni	343013	PRJEB10565	295669	Proteobacteria	Betaproteobacteria	4.19093	65.5	-	CYIG01	152	3882	3651	9/14/15	4/11/17	Contig	Department Biochemical and Microbial Technology	SAMEA3520081	GCA_001298675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/675/GCA_001298675.1_Draft_Genome	-	R-24608
Chlorobi bacterium NICIL-2	1662223	PRJNA283641	283641	FCB group	Bacteroidetes/Chlorobi group	2.76736	56.3	-	LDXS01	260	2325	2106	9/28/15	2/8/16	Contig	Lawrence Berkeley National Lab	SAMN03653682	GCA_001302225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/225/GCA_001302225.1_ASM130222v1	26325358	-
Chitinophagaceae bacterium PMP191F	1691979	PRJNA290986	290986	FCB group	Bacteroidetes/Chlorobi group	6.45258	43.4	-	LGYU01	66	5274	5159	9/28/15	4/11/17	Contig	University of South Carolina School of Medicine	SAMN03894433	GCA_001302245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/245/GCA_001302245.1_ASM130224v1	-	PMP191F
Gulbenkiania mobilis	397457	PRJNA293922	293922	Proteobacteria	Betaproteobacteria	3.42026	62	-	LIVN01	614	3303	3158	9/28/15	4/16/17	Contig	IISER Bhopal	SAMN04012125	GCA_001302325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/325/GCA_001302325.1_ASM130232v1	26586874	MB1
Aerophobetes bacterium AeroCD12-1	1569277	PRJNA264957	264957	unclassified Bacteria	Bacteria candidate phyla	1.27496	43.3	-	JSVS01	377	-	-	9/29/15	9/29/15	Contig	Sanya Institute of Deep Sea Science and Engineering	SAMN03144685	GCA_001302425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/425/GCA_001302425.1_ASM130242v1	-	-
Acidobacterium capsulatum ATCC 51196	240015	PRJNA28085	28085	Acidobacteria	Acidobacteriia	4.12736	60.5	chromosome:NC_012483.1/CP001472.1	-	1	3401	3320	3/30/09	5/18/17	Complete Genome	J. Craig Venter Institute	SAMN02603447	GCA_000022565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/565/GCA_000022565.1_ASM2256v1	19201974	ATCC 51196
Dehalococcoidia bacterium DG_22	1703393	PRJNA270657	270657	Terrabacteria group	Chloroflexi	1.135	63.5	-	LIZQ01	147	1166	974	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994141	GCA_001302685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/685/GCA_001302685.1_ASM130268v1	25922666	-
Planctomycetes bacterium DG_20	1703413	PRJNA270657	270657	PVC group	Planctomycetes	2.82157	67.6	-	LIZP01	331	2413	2052	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994140	GCA_001302675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/675/GCA_001302675.1_ASM130267v1	25922666	-
candidate division Zixibacteria bacterium DG_27	1703423	PRJNA270657	270657	FCB group	candidate division Zixibacteria	1.10197	53.6	-	LIZU01	133	1081	961	9/30/15	9/30/15	Contig	University of Texas	SAMN03994145	GCA_001302725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/725/GCA_001302725.1_ASM130272v1	25922666	-
Deltaproteobacteria bacterium DG_8	1703397	PRJNA270657	270657	Proteobacteria	delta/epsilon subdivisions	1.41873	39.1	-	LIZV01	199	1349	1192	9/30/15	9/30/15	Contig	University of Texas	SAMN03994146	GCA_001302765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/765/GCA_001302765.1_ASM130276v1	25922666	-
candidate division WOR_1 bacterium DG_54_3	1703775	PRJNA270657	270657	unclassified Bacteria	Bacteria candidate phyla	3.30333	44.8	-	LIZX01	279	3180	2800	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994148	GCA_001302785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/785/GCA_001302785.1_ASM130278v1	25922666	-
candidate division KD3-62 bacterium DG_56	1704032	PRJNA270657	270657	unclassified Bacteria	Bacteria candidate phyla	1.23897	64.9	-	LIZY01	144	1139	990	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994149	GCA_001302805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/805/GCA_001302805.1_ASM130280v1	25922666	-
candidate division TA06 bacterium DG_24	1703770	PRJNA270657	270657	unclassified Bacteria	Bacteria candidate phyla	2.32372	60.6	-	LIZS01	121	1977	1729	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994143	GCA_001302835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/835/GCA_001302835.1_ASM130283v1	25922666	-
Planctomycetes bacterium DG_23	1703414	PRJNA270657	270657	PVC group	Planctomycetes	2.02016	52.4	-	LIZR01	173	1973	1748	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994142	GCA_001302825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/825/GCA_001302825.1_ASM130282v1	25922666	-
Coxiella sp. DG_40	1703354	PRJNA270657	270657	Proteobacteria	Gammaproteobacteria	2.33862	39.8	-	LIZW01	88	2294	2057	9/30/15	9/30/15	Contig	University of Texas	SAMN03994147	GCA_001302865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/865/GCA_001302865.1_ASM130286v1	25922666	-
Spirochaetes bacterium DG_61	1704237	PRJNA270657	270657	Spirochaetes	unclassified Spirochaetes	4.30795	47	-	LJNB01	431	4225	3725	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994152	GCA_001302885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/885/GCA_001302885.1_ASM130288v1	25922666	-
Latescibacteria bacterium DG_63	1703781	PRJNA270657	270657	FCB group	Candidatus Latescibacteria	3.51971	54.9	-	LJNC01	83	2946	2553	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994153	GCA_001302905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/905/GCA_001302905.1_ASM130290v1	25922666	-
Parcubacteria bacterium DG_74_2	1703766	PRJNA270657	270657	unclassified Bacteria	Bacteria candidate phyla	1.28636	33.1	-	LJNF01	79	1472	1272	9/30/15	9/30/15	Contig	University of Texas	SAMN03994156	GCA_001302965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/965/GCA_001302965.1_ASM130296v1	25922666	-
Parcubacteria bacterium DG_74_3	1703767	PRJNA270657	270657	unclassified Bacteria	Bacteria candidate phyla	0.54378	36.9	-	LJNG01	21	621	517	9/30/15	9/30/15	Contig	University of Texas	SAMN03994157	GCA_001302985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/985/GCA_001302985.1_ASM130298v1	25922666	-
Microgenomates bacterium DG_75	1703769	PRJNA270657	270657	unclassified Bacteria	Bacteria candidate phyla	0.473645	40.9	-	LJNH01	53	535	448	9/30/15	9/30/15	Contig	University of Texas	SAMN03994158	GCA_001303005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/005/GCA_001303005.1_ASM130300v1	25922666	-
Deltaproteobacteria bacterium SG8_13	1703398	PRJNA270657	270657	Proteobacteria	delta/epsilon subdivisions	3.80055	57	-	LJNK01	125	3458	3137	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994161	GCA_001303025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/025/GCA_001303025.1_ASM130302v1	25922666	-
Gammaproteobacteria bacterium SG8_11	1703402	PRJNA270657	270657	Proteobacteria	Gammaproteobacteria	3.88213	47.1	-	LJNJ01	464	3764	3359	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994160	GCA_001303045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/045/GCA_001303045.1_ASM130304v1	25922666	-
Gammaproteobacteria bacterium SG8_15	1703403	PRJNA270657	270657	Proteobacteria	Gammaproteobacteria	2.7413	48	-	LJNL01	302	2701	2341	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994162	GCA_001303065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/065/GCA_001303065.1_ASM130306v1	25922666	-
Anaerolineae bacterium SG8_19	1703386	PRJNA270657	270657	Terrabacteria group	Chloroflexi	4.66887	51.6	-	LJNN01	437	4370	3712	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994164	GCA_001303105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/105/GCA_001303105.1_ASM130310v1	25922666	-
Parcubacteria bacterium DG_74_1	1703765	PRJNA270657	270657	unclassified Bacteria	Bacteria candidate phyla	0.58457	38.4	-	LJNE01	13	645	548	9/30/15	9/30/15	Contig	University of Texas	SAMN03994155	GCA_001303125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/125/GCA_001303125.1_ASM130312v1	25922666	-
Parcubacteria bacterium DG_72	1703764	PRJNA270657	270657	unclassified Bacteria	Bacteria candidate phyla	0.717349	34.6	-	LJND01	11	828	719	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994154	GCA_001303135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/135/GCA_001303135.1_ASM130313v1	25922666	-
Parcubacteria bacterium SG8_24	1703768	PRJNA270657	270657	unclassified Bacteria	Bacteria candidate phyla	1.11656	61.5	-	LJNP01	67	1169	1002	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994166	GCA_001303185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/185/GCA_001303185.1_ASM130318v1	25922666	-
Nitrospira bacterium SG8_3	1704023	PRJNA270657	270657	Nitrospirae	Nitrospira	5.95775	50	-	LJNR01	733	5848	5253	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994168	GCA_001303205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/205/GCA_001303205.1_ASM130320v1	25922666	-
candidate division TA06 bacterium DG_78	1703772	PRJNA270657	270657	unclassified Bacteria	Bacteria candidate phyla	2.09051	40.1	-	LJNI01	173	1986	1775	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994159	GCA_001303225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/225/GCA_001303225.1_ASM130322v1	25922666	-
Gammaproteobacteria bacterium SG8_30	1703404	PRJNA270657	270657	Proteobacteria	Gammaproteobacteria	2.82012	68.7	-	LJNS01	113	2625	2376	9/30/15	9/30/15	Contig	University of Texas	SAMN03994169	GCA_001303245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/245/GCA_001303245.1_ASM130324v1	25922666	-
Gammaproteobacteria bacterium SG8_31	1703405	PRJNA270657	270657	Proteobacteria	Gammaproteobacteria	5.96837	62.6	-	LJTI01	266	5638	5046	9/30/15	9/30/15	Contig	University of Texas	SAMN03994170	GCA_001303285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/285/GCA_001303285.1_ASM130328v1	25922666	-
Nitrospira bacterium SG8_35_1	1704024	PRJNA270657	270657	Nitrospirae	Nitrospira	3.33312	46.1	-	LJTK01	357	3299	2859	9/30/15	9/30/15	Contig	University of Texas	SAMN03994172	GCA_001303305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/305/GCA_001303305.1_ASM130330v1	25922666	-
Desulfobacterales bacterium SG8_35_2	1703401	PRJNA270657	270657	Proteobacteria	delta/epsilon subdivisions	3.6498	46.4	-	LJTL01	292	3455	3096	9/30/15	9/30/15	Contig	University of Texas	SAMN03994173	GCA_001303325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/325/GCA_001303325.1_ASM130332v1	25922666	-
Desulfobacterales bacterium SG8_35	1703400	PRJNA270657	270657	Proteobacteria	delta/epsilon subdivisions	2.59165	49	-	LJTJ01	206	2471	2237	9/30/15	9/30/15	Contig	University of Texas	SAMN03994171	GCA_001303345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/345/GCA_001303345.1_ASM130334v1	25922666	-
Myxococcales bacterium SG8_38_1	1703408	PRJNA270657	270657	Proteobacteria	delta/epsilon subdivisions	3.84884	63.1	-	LJTO01	234	3643	3130	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994176	GCA_001303365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/365/GCA_001303365.1_ASM130336v1	25922666	-
Nitrospira bacterium SG8_35_4	1704025	PRJNA270657	270657	Nitrospirae	Nitrospira	2.69211	46.5	-	LJTM01	292	2667	2361	9/30/15	9/30/15	Contig	University of Texas	SAMN03994174	GCA_001303405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/405/GCA_001303405.1_ASM130340v1	25922666	-
Myxococcales bacterium SG8_38	1703407	PRJNA270657	270657	Proteobacteria	delta/epsilon subdivisions	3.62366	63.5	-	LJTN01	105	3347	2879	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994175	GCA_001303415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/415/GCA_001303415.1_ASM130341v1	25922666	-
Betaproteobacteria bacterium SG8_39	1703390	PRJNA270657	270657	Proteobacteria	Betaproteobacteria	3.13718	68.1	-	LJTQ01	233	3171	2910	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994178	GCA_001303445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/445/GCA_001303445.1_ASM130344v1	25922666	-
Phycisphaerae bacterium SG8_4	1703409	PRJNA270657	270657	PVC group	Planctomycetes	4.45887	54.8	-	LJTR01	479	3836	3334	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994179	GCA_001303465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/465/GCA_001303465.1_ASM130346v1	25922666	-
Gammaproteobacteria bacterium SG8_47	1703406	PRJNA270657	270657	Proteobacteria	Gammaproteobacteria	2.69674	60.7	-	LJTV01	197	2684	2445	9/30/15	9/30/15	Contig	University of Texas	SAMN03994183	GCA_001303495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/495/GCA_001303495.1_ASM130349v1	25922666	-
Dehalococcoidia bacterium SM23_28_2	1703396	PRJNA270657	270657	Terrabacteria group	Chloroflexi	1.4583	63.8	-	LJUA01	106	1452	1229	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994194	GCA_001303545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/545/GCA_001303545.1_ASM130354v1	25922666	-
Dehalococcoidia bacterium SG8_51_3	1703394	PRJNA270657	270657	Terrabacteria group	Chloroflexi	1.75904	50.7	-	LJTX01	204	1838	1641	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994185	GCA_001303565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/565/GCA_001303565.1_ASM130356v1	25922666	-
Betaproteobacteria bacterium SG8_41	1703391	PRJNA270657	270657	Proteobacteria	Betaproteobacteria	3.74763	62.9	-	LJTT01	147	3523	3177	9/30/15	9/30/15	Contig	University of Texas	SAMN03994181	GCA_001303585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/585/GCA_001303585.1_ASM130358v1	25922666	-
Planctomycetes bacterium SM23_25	1704028	PRJNA270657	270657	PVC group	Planctomycetes	3.77041	66.7	-	LJTY01	418	3121	2649	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994192	GCA_001303605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/605/GCA_001303605.1_ASM130360v1	25922666	-
Dehalococcoidia bacterium SM23_28_1	1703395	PRJNA270657	270657	Terrabacteria group	Chloroflexi	0.732023	63.7	-	LJTZ01	89	767	645	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994193	GCA_001303625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/625/GCA_001303625.1_ASM130362v1	25922666	-
Omnitrophica WOR_2 bacterium SM23_29	1703776	PRJNA270657	270657	PVC group	Candidatus Omnitrophica	2.04325	41.6	-	LJUB01	169	2165	1888	9/30/15	9/30/15	Contig	University of Texas	SAMN03994195	GCA_001303645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/645/GCA_001303645.1_ASM130364v1	25922666	-
Phycisphaerae bacterium SM23_33	1703412	PRJNA270657	270657	PVC group	Planctomycetes	3.42671	67.8	-	LJUF01	322	2944	2534	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994199	GCA_001303665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/665/GCA_001303665.1_ASM130366v1	25922666	-
Phycisphaerae bacterium SM23_30	1703411	PRJNA270657	270657	PVC group	Planctomycetes	4.01044	51	-	LJUC01	295	3231	2792	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994196	GCA_001303695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/695/GCA_001303695.1_ASM130369v1	25922666	-
candidate division TA06 bacterium SM23_40	1703774	PRJNA270657	270657	unclassified Bacteria	Bacteria candidate phyla	2.88309	60.3	-	LJUI01	189	2496	2192	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994202	GCA_001303705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/705/GCA_001303705.1_ASM130370v1	25922666	-
Nitrospira bacterium SM23_35	1704026	PRJNA270657	270657	Nitrospirae	Nitrospira	1.41661	46.9	-	LJUG01	140	1482	1336	9/30/15	9/30/15	Contig	University of Texas	SAMN03994200	GCA_001303745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/745/GCA_001303745.1_ASM130374v1	25922666	-
Chlamydiae bacterium SM23_39	1704235	PRJNA270657	270657	PVC group	Chlamydiae	1.1266	26.2	-	LJUH01	67	1095	986	9/30/15	9/30/15	Contig	University of Texas	SAMN03994201	GCA_001303765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/765/GCA_001303765.1_ASM130376v1	25922666	-
candidate division WOR_3 bacterium SM23_42	1703779	PRJNA270657	270657	unclassified Bacteria	Bacteria candidate phyla	2.53279	46.2	-	LJUJ01	59	2359	2097	9/30/15	9/30/15	Contig	University of Texas	SAMN03994203	GCA_001303785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/785/GCA_001303785.1_ASM130378v1	25922666	-
candidate division WOR_3 bacterium SM23_60	1703780	PRJNA270657	270657	unclassified Bacteria	Bacteria candidate phyla	2.89568	47.4	-	LJUO01	246	2817	2502	9/30/15	9/30/15	Contig	University of Texas	SAMN03994208	GCA_001303805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/805/GCA_001303805.1_ASM130380v1	25922666	-
Acidithiobacillales bacterium SM23_46	1703385	PRJNA270657	270657	Proteobacteria	Acidithiobacillia	2.82603	61.4	-	LJUK01	263	2894	2517	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994204	GCA_001303835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/835/GCA_001303835.1_ASM130383v1	25922666	-
Gemmobacter sp. LW-1	1529005	PRJNA295555	295555	Proteobacteria	Alphaproteobacteria	4.34443	64.8	-	LJSC01	71	4259	4080	9/30/15	4/11/17	Scaffold	University of Western Australia	SAMN04075706	GCA_001303875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/875/GCA_001303875.1_ASM130387v1	26586870	LW-1
Planctomycetes bacterium SM23_32	1704029	PRJNA270657	270657	PVC group	Planctomycetes	2.29935	69.2	-	LJUE01	236	2058	1749	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994198	GCA_001303885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/885/GCA_001303885.1_ASM130388v1	25922666	-
Anaerolineae bacterium SM23_ 63	1703387	PRJNA270657	270657	Terrabacteria group	Chloroflexi	4.28158	51	-	LJUS01	171	3853	3370	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994211	GCA_001303965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/965/GCA_001303965.1_ASM130396v1	25922666	-
candidate division Zixibacteria bacterium SM23_73	1703425	PRJNA270657	270657	FCB group	candidate division Zixibacteria	1.44148	43.1	-	LJUV01	163	1401	1235	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994213	GCA_001303995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/995/GCA_001303995.1_ASM130399v1	25922666	-
candidate division Zixibacteria bacterium SM23_81	1703428	PRJNA270657	270657	FCB group	candidate division Zixibacteria	3.07491	52.8	-	LJUY01	99	2633	2298	9/30/15	9/30/15	Contig	University of Texas	SAMN03994216	GCA_001304015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/015/GCA_001304015.1_ASM130401v1	25922666	-
bacterium SM23_31	1703762	PRJNA270657	270657	unclassified Bacteria	unclassified Bacteria (miscellaneous)	2.82133	40.3	-	LJUD01	300	2566	2295	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994197	GCA_001304035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/035/GCA_001304035.1_ASM130403v1	25922666	-
candidate division BRC1 bacterium SM23_51	1703761	PRJNA270657	270657	unclassified Bacteria	Bacteria candidate phyla	2.76453	59.8	-	LJUL01	306	2417	2062	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994205	GCA_001304075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/075/GCA_001304075.1_ASM130407v1	25922666	-
Deltaproteobacteria bacterium SM23_61	1703399	PRJNA270657	270657	Proteobacteria	delta/epsilon subdivisions	4.24146	56.2	-	LJUR01	286	4019	3541	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994218	GCA_001304105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/105/GCA_001304105.1_ASM130410v1	25922666	-
Omnitrophica WOR_2 bacterium SM23_72	1703777	PRJNA270657	270657	PVC group	Candidatus Omnitrophica	2.73046	44.9	-	LJUU01	122	2860	2514	9/30/15	9/30/15	Contig	University of Texas	SAMN03994219	GCA_001304135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/135/GCA_001304135.1_ASM130413v1	25922666	-
candidate division Zixibacteria bacterium SM23_73_3	1703427	PRJNA270657	270657	FCB group	candidate division Zixibacteria	1.88276	45.2	-	LJUX01	90	1663	1494	9/30/15	9/30/15	Contig	University of Texas	SAMN03994215	GCA_001304155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/155/GCA_001304155.1_ASM130415v1	25922666	-
Anaerolineae bacterium SM23_84	1703388	PRJNA270657	270657	Terrabacteria group	Chloroflexi	3.73478	59.4	-	LJUZ01	362	3439	2914	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994217	GCA_001304175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/175/GCA_001304175.1_ASM130417v1	25922666	-
candidate division TA06 bacterium SM1_40	1703773	PRJNA270657	270657	unclassified Bacteria	Bacteria candidate phyla	2.55945	60.3	-	LJVA01	197	2252	1971	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994186	GCA_001304185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/185/GCA_001304185.1_ASM130418v1	25922666	-
Acidithiobacillales bacterium SM1_46	1703384	PRJNA270657	270657	Proteobacteria	Acidithiobacillia	2.61636	61.7	-	LJVB01	182	2720	2440	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994187	GCA_001304215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/215/GCA_001304215.1_ASM130421v1	25922666	-
candidate division Zixibacteria bacterium SM1_73	1703424	PRJNA270657	270657	FCB group	candidate division Zixibacteria	2.22362	44.1	-	LJVD01	147	2061	1833	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994189	GCA_001304225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/225/GCA_001304225.1_ASM130422v1	25922666	-
candidate division WOR_3 bacterium SM1_77	1703778	PRJNA270657	270657	unclassified Bacteria	Bacteria candidate phyla	1.26914	45.8	-	LJVE01	150	1326	1170	9/30/15	9/30/15	Contig	University of Texas	SAMN03994190	GCA_001304255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/255/GCA_001304255.1_ASM130425v1	25922666	-
Phycisphaerae bacterium SM1_79	1703410	PRJNA270657	270657	PVC group	Planctomycetes	2.95206	50.3	-	LJVF01	241	2561	2260	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994191	GCA_001304275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/275/GCA_001304275.1_ASM130427v1	25922666	-
Planctomycetes bacterium SM23_65	1704030	PRJNA270657	270657	PVC group	Planctomycetes	1.82579	62.3	-	LJUT01	212	1592	1398	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994212	GCA_001304295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/295/GCA_001304295.1_ASM130429v1	25922666	-
candidate division Zixibacteria bacterium SM23_73_2	1703426	PRJNA270657	270657	FCB group	candidate division Zixibacteria	2.25506	42.5	-	LJUW01	123	2050	1857	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994214	GCA_001304315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/315/GCA_001304315.1_ASM130431v1	25922666	-
candidate division TA06 bacterium DG_26	1703771	PRJNA270657	270657	unclassified Bacteria	Bacteria candidate phyla	1.67682	52.1	-	LIZT01	134	1589	1384	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994144	GCA_001304335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/335/GCA_001304335.1_ASM130433v1	25922666	-
Dehalococcoidia bacterium DG_18	1703392	PRJNA270657	270657	Terrabacteria group	Chloroflexi	0.912888	53.8	-	LIZO01	128	970	872	9/30/15	12/30/15	Scaffold	University of Texas	SAMN03994139	GCA_001304345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/345/GCA_001304345.1_ASM130434v1	25922666	-
Planctomycetes bacterium DG_58	1703415	PRJNA270657	270657	PVC group	Planctomycetes	1.74662	62.1	-	LJMZ01	220	1540	1365	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994150	GCA_001304355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/355/GCA_001304355.1_ASM130435v1	25922666	-
Syntrophobacter sp. DG_60	1703361	PRJNA270657	270657	Proteobacteria	delta/epsilon subdivisions	1.35746	39.1	-	LJNA01	128	1453	1274	9/30/15	9/30/15	Contig	University of Texas	SAMN03994151	GCA_001304365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/365/GCA_001304365.1_ASM130436v1	25922666	-
Betaproteobacteria bacterium SG8_40	1703389	PRJNA270657	270657	Proteobacteria	Betaproteobacteria	2.4338	60.3	-	LJTS01	260	2449	2269	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994180	GCA_001304425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/425/GCA_001304425.1_ASM130442v1	25922666	-
Thiotrichales bacterium SG8_50	1703416	PRJNA270657	270657	Proteobacteria	Gammaproteobacteria	3.64528	57.3	-	LJTW01	366	3630	3183	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994184	GCA_001304455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/455/GCA_001304455.1_ASM130445v1	25922666	-
Acidithiobacillales bacterium SG8_45	1703383	PRJNA270657	270657	Proteobacteria	Acidithiobacillia	2.28308	56	-	LJTU01	98	2319	2094	9/30/15	9/30/15	Contig	University of Texas	SAMN03994182	GCA_001304445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/445/GCA_001304445.1_ASM130444v1	25922666	-
bacterium SM23_57	1703763	PRJNA270657	270657	unclassified Bacteria	unclassified Bacteria (miscellaneous)	2.32037	46.4	-	LJUN01	284	2126	1860	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994207	GCA_001304495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/495/GCA_001304495.1_ASM130449v1	25922666	-
Photobacterium marinum	1056511	PRJNA176474	176474	Proteobacteria	Gammaproteobacteria	5.53696	46.2	-	AMZO01	83	4872	4757	1/11/13	5/19/17	Contig	Institute of Microbial Technology	SAMN02469996	GCA_000331515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/515/GCA_000331515.1_Photobacterium_marinum_AK15	-	AK15
Clostridia bacterium UC5.1-1F7	1697779	PRJDB4119	297085	Terrabacteria group	Firmicutes	6.28432	48.8	-	BBZM01	130	-	-	9/25/15	10/16/15	Contig	"Laboratory of Metagenomics, Graduate School of Frontier Sciences, The University of Tokyo"	SAMD00036501	GCA_001304835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/835/GCA_001304835.1_ASM130483v1	26411289	UC5.1-1F7
Clostridia bacterium UC5.1-1D2	1697780	PRJDB4120	297086	Terrabacteria group	Firmicutes	4.97973	49.3	-	BBZN01	141	-	-	9/25/15	10/16/15	Contig	"Laboratory of Metagenomics, Graduate School of Frontier Sciences, The University of Tokyo"	SAMD00036502	GCA_001304855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/855/GCA_001304855.1_ASM130485v1	26411289	UC5.1-1D2
Clostridia bacterium UC5.1-2E3	1697781	PRJDB4121	297087	Terrabacteria group	Firmicutes	3.45614	54.6	-	BBZO01	80	-	-	9/25/15	10/16/15	Contig	"Laboratory of Metagenomics, Graduate School of Frontier Sciences, The University of Tokyo"	SAMD00036503	GCA_001304875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/875/GCA_001304875.1_ASM130487v1	26411289	UC5.1-2E3
Clostridia bacterium UC5.1-1A9	1697782	PRJDB4122	297088	Terrabacteria group	Firmicutes	5.15599	47.5	-	BBZP01	255	-	-	9/25/15	10/16/15	Contig	"Laboratory of Metagenomics, Graduate School of Frontier Sciences, The University of Tokyo"	SAMD00036504	GCA_001304895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/895/GCA_001304895.1_ASM130489v1	26411289	UC5.1-1A9
Clostridia bacterium UC5.1-1F8	1697783	PRJDB4123	297089	Terrabacteria group	Firmicutes	7.21556	48.9	-	BBZQ01	124	-	-	9/25/15	10/16/15	Contig	"Laboratory of Metagenomics, Graduate School of Frontier Sciences, The University of Tokyo"	SAMD00036505	GCA_001304915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/915/GCA_001304915.1_ASM130491v1	26411289	UC5.1-1F8
Clostridia bacterium UC5.1-1D4	1697784	PRJDB4124	297090	Terrabacteria group	Firmicutes	6.41181	46.5	-	BBZR01	85	-	-	9/25/15	10/16/15	Contig	"Laboratory of Metagenomics, Graduate School of Frontier Sciences, The University of Tokyo"	SAMD00036506	GCA_001304935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/935/GCA_001304935.1_ASM130493v1	26411289	UC5.1-1D4
Clostridia bacterium UC5.1-2D9	1697785	PRJDB4125	297091	Terrabacteria group	Firmicutes	3.51426	42.2	-	BBZS01	67	-	-	9/25/15	10/16/15	Contig	"Laboratory of Metagenomics, Graduate School of Frontier Sciences, The University of Tokyo"	SAMD00036507	GCA_001304955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/955/GCA_001304955.1_ASM130495v1	26411289	UC5.1-2D9
Clostridia bacterium UC5.1-2E1	1697786	PRJDB4126	297092	Terrabacteria group	Firmicutes	3.68953	44.2	-	BBZT01	21	-	-	9/25/15	10/16/15	Contig	"Laboratory of Metagenomics, Graduate School of Frontier Sciences, The University of Tokyo"	SAMD00036508	GCA_001304975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/975/GCA_001304975.1_ASM130497v1	26411289	UC5.1-2E1
Clostridia bacterium UC5.1-1D10	1697787	PRJDB4127	297093	Terrabacteria group	Firmicutes	2.72752	45.1	-	BBZU01	40	2892	2463	9/25/15	4/11/17	Contig	"Laboratory of Metagenomics, Graduate School of Frontier Sciences, The University of Tokyo"	SAMD00036509	GCA_001304995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/995/GCA_001304995.1_ASM130499v1	26411289	UC5.1-1D10
Clostridia bacterium UC5.1-2H6	1697788	PRJDB4128	297094	Terrabacteria group	Firmicutes	3.57871	31.2	-	BBZV01	67	3483	2361	9/25/15	4/11/17	Contig	"Laboratory of Metagenomics, Graduate School of Frontier Sciences, The University of Tokyo"	SAMD00036510	GCA_001305015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/305/015/GCA_001305015.1_ASM130501v1	26411289	UC5.1-2H6
Clostridia bacterium UC5.1-1E3	1697789	PRJDB4129	297095	Terrabacteria group	Firmicutes	3.65439	31.4	-	BBZW01	118	-	-	9/25/15	10/16/15	Contig	"Laboratory of Metagenomics, Graduate School of Frontier Sciences, The University of Tokyo"	SAMD00036511	GCA_001305035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/305/035/GCA_001305035.1_ASM130503v1	26411289	UC5.1-1E3
Clostridia bacterium UC5.1-1C12	1697790	PRJDB4130	297096	Terrabacteria group	Firmicutes	3.29415	40.3	-	BBZX01	39	3813	2952	9/25/15	4/11/17	Contig	"Laboratory of Metagenomics, Graduate School of Frontier Sciences, The University of Tokyo"	SAMD00036512	GCA_001305055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/305/055/GCA_001305055.1_ASM130505v1	26411289	UC5.1-1C12
Clostridia bacterium UC5.1-2G4	1697791	PRJDB4131	297097	Terrabacteria group	Firmicutes	4.5821	43.4	-	BBZY01	185	-	-	9/25/15	10/16/15	Contig	"Laboratory of Metagenomics, Graduate School of Frontier Sciences, The University of Tokyo"	SAMD00036513	GCA_001305075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/305/075/GCA_001305075.1_ASM130507v1	26411289	UC5.1-2G4
Clostridia bacterium UC5.1-2F7	1697792	PRJDB4132	297098	Terrabacteria group	Firmicutes	2.26535	56.3	-	BBZZ01	35	2343	1905	9/25/15	4/11/17	Contig	"Laboratory of Metagenomics, Graduate School of Frontier Sciences, The University of Tokyo"	SAMD00036514	GCA_001305095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/305/095/GCA_001305095.1_ASM130509v1	26411289	UC5.1-2F7
Clostridia bacterium UC5.1-1E11	1697793	PRJDB4133	297099	Terrabacteria group	Firmicutes	2.99779	48.9	-	BCAA01	83	2808	2290	9/25/15	4/11/17	Contig	"Laboratory of Metagenomics, Graduate School of Frontier Sciences, The University of Tokyo"	SAMD00036515	GCA_001305115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/305/115/GCA_001305115.1_ASM130511v1	26411289	UC5.1-1E11
Clostridia bacterium UC5.1-1D1	1697794	PRJDB4134	297100	Terrabacteria group	Firmicutes	3.11398	56.5	-	BCAB01	91	3357	2865	9/25/15	4/11/17	Contig	"Laboratory of Metagenomics, Graduate School of Frontier Sciences, The University of Tokyo"	SAMD00036516	GCA_001305135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/305/135/GCA_001305135.1_ASM130513v1	26411289	UC5.1-1D1
Clostridia bacterium UC5.1-2H11	1697795	PRJDB4135	297101	Terrabacteria group	Firmicutes	3.53065	61.6	-	BCAC01	87	3413	2442	9/25/15	4/11/17	Contig	"Laboratory of Metagenomics, Graduate School of Frontier Sciences, The University of Tokyo"	SAMD00036517	GCA_001305155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/305/155/GCA_001305155.1_ASM130515v1	26411289	UC5.1-2H11
Bacteroidia bacterium UC5.1-2G11	1697796	PRJDB4136	297102	FCB group	Bacteroidetes/Chlorobi group	5.73588	42.1	-	BCAD01	121	-	-	9/25/15	10/16/15	Contig	"Laboratory of Metagenomics, Graduate School of Frontier Sciences, The University of Tokyo"	SAMD00036518	GCA_001305175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/305/175/GCA_001305175.1_ASM130517v1	26411289	UC5.1-2G11
Actinobacteria bacterium UC5.1-1B11	1697797	PRJDB4137	297103	Terrabacteria group	Actinobacteria	2.06966	63.1	-	BCAE01	343	1909	1158	9/25/15	4/11/17	Contig	"Laboratory of Metagenomics, Graduate School of Frontier Sciences, The University of Tokyo"	SAMD00036519	GCA_001305195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/305/195/GCA_001305195.1_ASM130519v1	26411289	UC5.1-1B11
Actinobacteria bacterium UC5.1-1C2	1697798	PRJDB4138	297104	Terrabacteria group	Actinobacteria	2.31848	58.9	-	BCAF01	110	-	-	9/25/15	10/16/15	Contig	"Laboratory of Metagenomics, Graduate School of Frontier Sciences, The University of Tokyo"	SAMD00036520	GCA_001305215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/305/215/GCA_001305215.1_ASM130521v1	26411289	UC5.1-1C2
Neptunomonas antarctica	619304	PRJNA295504	295504	Proteobacteria	Gammaproteobacteria	4.56883	45.7	-	LJSI01	55	4211	4097	10/1/15	4/11/17	Contig	Shandong University	SAMN04074909	GCA_001305295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/305/295/GCA_001305295.1_Nant_v1	-	S3-22
Bifidobacterium animalis subsp. lactis AD011	442563	PRJNA19423	19423	Terrabacteria group	Actinobacteria	1.93369	60.5	chromosome:NC_011835.1/CP001213.1	-	1	1661	1551	1/6/09	3/30/17	Complete Genome	Korea Research Institute of Bioscience and Biotechnology (KRIBB)	SAMN02603485	GCA_000021425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/425/GCA_000021425.1_ASM2142v1	19011029	AD011
Bathymodiolus azoricus thioautotrophic gill symbiont	235205	PRJEB8263	295654	Proteobacteria	Gammaproteobacteria	1.85985	37.6	-	CDSC02	515	1782	1566	9/14/15	8/2/17	Contig	MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY	SAMEA3214417	GCA_001298715.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/715/GCA_001298715.2_BazSymAV2	-	BazSymA
Propionispora sp. 2/2-37	1677858	PRJEB10695	295672	Terrabacteria group	Firmicutes	4.12151	45.6	-	CYSP01	43	4001	3845	9/14/15	4/11/17	Contig	CEBITEC	SAMEA3539092	GCA_001298735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/735/GCA_001298735.1_2_2	-	-
Clostridiales bacterium SIT11	1673726	PRJEB10815	295457	Terrabacteria group	Firmicutes	1.76222	42.7	-	CYUK01	3	1689	1604	9/23/15	9/27/15	Contig	URMITE	SAMEA3538360	GCA_001299455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/455/GCA_001299455.1_Ndiopella_massiliensis	-	SIT11
Neofamilia massiliensis	1673724	PRJEB10814	295456	Terrabacteria group	Firmicutes	1.92033	34	-	CYUJ01	3	1825	1742	9/23/15	4/11/17	Contig	URMITE	SAMEA3538359	GCA_001299475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/475/GCA_001299475.1_Neofamilia_massiliensis	-	SIT13
Bacillus rubiinfantis	1499680	PRJEB6468	251846	Terrabacteria group	Firmicutes	4.30957	40	-	CCFE01	33	4084	3890	7/15/14	4/10/17	Contig	URMITE	SAMEA2602670	GCA_000752035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/035/GCA_000752035.1_Bacillus_rubiinfantis	-	-
Granulicatella sp. HMSC30F09	1581071	PRJNA269840	269840	Terrabacteria group	Firmicutes	1.92747	37.8	-	LWOQ01	35	1876	1819	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436228	GCA_001806915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/915/GCA_001806915.1_ASM180691v1	-	HMSC30F09
Prosthecomicrobium hirschii	665126	PRJNA284535	284535	Proteobacteria	Alphaproteobacteria	6.48498	68.8	-	LJYW01	6	5783	5616	10/1/15	4/16/17	Scaffold	University of Missouri	SAMN03703222	GCA_001305515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/305/515/GCA_001305515.1_ASM130551v1	26586892	16
Pseudomonas fluorescens SBW25	216595	PRJEA31229	31229	Proteobacteria	Gammaproteobacteria	6.72254	60.5	chromosome:NC_012660.1/AM181176.4	-	1	6177	5956	1/9/08	5/19/17	Complete Genome	Wellcome Trust Sanger Institute	SAMEA2272316	GCA_000009225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/225/GCA_000009225.1_ASM922v1	19432983	SBW25
Pseudomonas fluorescens Pf0-1	205922	PRJNA12	12	Proteobacteria	Gammaproteobacteria	6.43841	60.5	chromosome:NC_007492.2/CP000094.2	-	1	5863	5679	10/7/05	5/24/17	Complete Genome	DOE Joint Genome Institute	SAMN02598267	GCA_000012445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/445/GCA_000012445.1_ASM1244v1	19432983	Pf0-1
Ornatilinea apprima	1134406	PRJNA289676	289676	Terrabacteria group	Chloroflexi	4.33833	55	-	LGCL01	45	3863	3768	10/2/15	4/11/17	Contig	California Institute of Technology	SAMN03856825	GCA_001306115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/115/GCA_001306115.1_ASM130611v1	26586890	P3M-1
Herpetosiphon geysericola	70996	PRJNA271546	271546	Terrabacteria group	Chloroflexi	6.14041	50.7	-	LGKP01	46	5340	5219	10/2/15	4/16/17	Contig	California Institute of Technology	SAMN03274862	GCA_001306135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/135/GCA_001306135.1_ASM130613v1	26586889	DSM 7119
Thermanaerothrix daxensis	869279	PRJNA271542	271542	Terrabacteria group	Chloroflexi	3.01207	56	-	LGKO01	6	2799	2708	10/2/15	4/16/17	Contig	California Institute of Technology	SAMN03274859	GCA_001306145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/145/GCA_001306145.1_ASM130614v1	26586891	GNS-1
Rhizobium leguminosarum	384	PRJNA316801	316801	Proteobacteria	Alphaproteobacteria	8.44734	60.4985	chromosome:NZ_CP018228.1/CP018228.1; plasmid unnamed1:NZ_CP018229.1/CP018229.1; plasmid unnamed2:NZ_CP018230.1/CP018230.1; plasmid unnamed3:NZ_CP018231.1/CP018231.1; plasmid unnamed4:NZ_CP018232.1/CP018232.1; plasmid unnamed5:NZ_CP018233.1/CP018233.1; plasmid unnamed6:NZ_CP018234.1/CP018234.1; plasmid unnamed7:NZ_CP018235.1/CP018235.1; plasmid unnamed8:NZ_CP018236.1/CP018236.1	-	9	8320	7605	12/7/16	4/6/17	Complete Genome	All-Russia Research Institute for Agricultural Microbiology	SAMN05990783	GCA_001890425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/425/GCA_001890425.1_ASM189042v1	-	Vaf-108
Lactobacillus herbarum	1670446	PRJNA286806	286806	Terrabacteria group	Firmicutes	2.89988	43.5	-	LFEE01	55	2785	2636	6/24/15	4/10/17	Scaffold	DuPont	SAMN03770836	GCA_001039045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/045/GCA_001039045.1_ASM103904v1	26227596	TCF032-E4
Staphylococcus schweitzeri	1654388	PRJEB6388	256286	Terrabacteria group	Firmicutes	2.67092	32.2	-	CCEG01	26	2631	2466	9/6/14	4/9/17	Contig	WTSI	SAMEA2007893	GCA_000751735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/735/GCA_000751735.1_Sa_FSCB1B	-	-
Aeromonas hydrophila	644	PRJNA308632	308632	Proteobacteria	Gammaproteobacteria	5.27513	60.4598	chromosome:NZ_CP013965.1/CP013965.1; plasmid pAhD4-1:NZ_CP013966.1/CP013966.1; plasmid pAhD4-2:NZ_CP013967.1/CP013967.1; plasmid pAhD4-3:NZ_CP013968.1/CP013968.1; plasmid pAhD4-4:NZ_CP013969.1/CP013969.1	-	5	4909	4667	1/20/16	4/4/17	Complete Genome	HUAZHONG AGRICULTURAL UNIVERSITY	SAMN04404355	GCA_001518775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/775/GCA_001518775.1_ASM151877v1	-	D4
Halolactibacillus sp. JCM 19043	1460638	PRJDB1616	243816	Terrabacteria group	Firmicutes	3.1743	39	-	BAXD01	103	3166	2540	10/1/15	4/11/17	Contig	"Microbe Division/JCM, RIKEN BioResource Center"	SAMD00000378	GCA_001310395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/395/GCA_001310395.1_ASM131039v1	-	JCM 19043
Enterovibrio sp. JCM 19048	1460642	PRJDB1620	243817	Proteobacteria	Gammaproteobacteria	5.26935	50.8	-	BAXE01	70	-	-	10/1/15	10/1/15	Contig	"Microbe Division/JCM, RIKEN BioResource Center"	SAMD00000379	GCA_001310415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/415/GCA_001310415.1_ASM131041v1	-	JCM 19048
Isoptericola sp. JCM 19051	1460645	PRJDB1623	243819	Terrabacteria group	Actinobacteria	0.256642	65.6	-	BAXH01	290	-	-	10/1/15	10/1/15	Contig	"Microbe Division/JCM, RIKEN BioResource Center"	SAMD00000382	GCA_001310475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/475/GCA_001310475.1_ASM131047v1	-	JCM 19051
Thalassobacillus sp. C254	1225341	PRJDB1709	252072	Terrabacteria group	Firmicutes	4.05015	41	-	BAXQ01	79	4407	3106	10/1/15	4/16/17	Contig	The University of Tokyo	SAMD00000371	GCA_001310615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/615/GCA_001310615.1_ASM131061v1	-	JCM 19033
Pseudomonas fluorescens PICF7	1334632	PRJNA203247	203247	Proteobacteria	Gammaproteobacteria	6.13673	60.4	chromosome:NZ_CP005975.1/CP005975.1	-	1	5694	5496	3/26/15	4/3/17	Complete Genome	CBGP	SAMN03446264	GCA_000963495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/495/GCA_000963495.1_ASM96349v1	25685259	PICF7
Cobetia sp. UCD-24C	1716176	PRJNA295759	295759	Proteobacteria	Gammaproteobacteria	4.22999	62.6	-	LJTD01	51	3549	3386	10/5/15	4/11/17	Contig	UC Davis	SAMN04088201	GCA_001306765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/765/GCA_001306765.1_ASM130676v1	26966219	UCD-24C
Halolamina pelagica	699431	PRJNA272888	272888	Euryarchaeota	Halobacteria	2.97254	67.6	-	LGUC01	3	3138	2448	10/6/15	3/29/17	Contig	"Indian Agricultural Research Institute, New Delhi"	SAMN03287580	GCA_001307315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/315/GCA_001307315.1_Halpeg_cdk2_1	-	CDK2
'Echinacea purpurea' witches'-broom phytoplasma	1123738	PRJNA294131	294131	Terrabacteria group	Tenericutes	0.545427	23.9	-	LKAC01	28	493	423	10/7/15	4/11/17	Contig	Academia Sinica	SAMN04017316	GCA_001307505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/505/GCA_001307505.1_ASM130750v1	26607900	NCHU2014
Rhodocyclaceae bacterium Paddy-1	1691980	PRJNA291117	291117	Proteobacteria	Betaproteobacteria	3.55404	66	-	LGUD01	50	3188	3094	10/7/15	4/11/17	Scaffold	Guangdong Institute of Eco-Environmental and Soil Sciences	SAMN03940017	GCA_001307855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/855/GCA_001307855.1_ASM130785v1	-	Paddy-1
Aliiroseovarius crassostreae	154981	PRJNA291771	291771	Proteobacteria	Alphaproteobacteria	3.72538	58.3995	plasmid unnamed:NZ_CM003503.1/CM003503.1	LKBA01	27	3706	3472	10/7/15	4/11/17	Contig	University of Rhode Island	SAMN03952659	GCA_001307765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/765/GCA_001307765.1_ASM130776v1	26988054	CV919-312
Stenotrophomonas pictorum JCM 9942	1236960	PRJDB659	243653	Proteobacteria	Gammaproteobacteria	3.34298	65.7	-	BAZI01	829	3349	2346	10/1/15	7/19/17	Contig	The University of Tokyo	SAMD00000483	GCA_001310775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/775/GCA_001310775.1_ASM131077v1	-	JCM 9942
Diaphorobacter nitroreducens JCM 11421	1236961	PRJDB660	243654	Proteobacteria	Betaproteobacteria	3.00837	65.5	-	BAZJ01	1305	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000419	GCA_001310795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/795/GCA_001310795.1_ASM131079v1	-	JCM 11421
Pseudovibrio denitrificans	258256	PRJEB17572	352001	Proteobacteria	Alphaproteobacteria	6.08038	52.2	-	FPBD01	36	5414	5310	11/2/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444141	GCA_900116575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/575/GCA_900116575.1_IMG-taxon_2693429873_annotated_assembly	-	DSM 17465
Methylobacterium rhodinum JCM 2811	1236969	PRJDB667	252057	Proteobacteria	Alphaproteobacteria	3.81876	67.9	-	BAZM01	2511	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000467	GCA_001310855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/855/GCA_001310855.1_ASM131085v1	-	JCM 2811
Methylobacterium thiocyanatum JCM 10893	1236972	PRJDB670	252058	Proteobacteria	Alphaproteobacteria	3.89895	67.2	-	BAZP01	2576	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000411	GCA_001310875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/875/GCA_001310875.1_ASM131087v1	-	JCM 10893
Marinifilum fragile JCM 15579	1236979	PRJDB679	243661	FCB group	Bacteroidetes/Chlorobi group	4.71848	35.7	-	BAZX01	75	3991	3711	10/1/15	4/17/17	Contig	The University of Tokyo	SAMD00000450	GCA_001310955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/955/GCA_001310955.1_ASM131095v1	-	JCM 15579
[Clostridium] glycyrrhizinilyticum JCM 13369	1291051	PRJDB757	243667	Terrabacteria group	Firmicutes	3.21542	45.3	-	BBAB01	65	3083	2492	10/1/15	4/16/17	Contig	The University of Tokyo	SAMD00000437	GCA_001311035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/035/GCA_001311035.1_ASM131103v1	-	JCM 13369
Lactobacillus sharpeae JCM 1186 = DSM 20505	1291052	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.4443	53.4	-	AYYO01	57	2380	2300	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369377	GCA_001436225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/225/GCA_001436225.1_ASM143622v1	26415554	DSM 20505
Pseudomonas fluorescens	294	PRJNA257447	257447	Proteobacteria	Gammaproteobacteria	6.14395	60.4	chromosome:NZ_CP010896.1/CP010896.1	-	1	5684	5517	2/25/15	4/3/17	Complete Genome	Academia Sinica	SAMN03372067	GCA_000934565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/565/GCA_000934565.1_ASM93456v1	26452056	PCL1751
Lactobacillus similis DSM 23365 = JCM 2765	1423804	PRJDB759	243670	Terrabacteria group	Firmicutes	3.45349	47	-	BBAD01	176	3334	2589	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00000466	GCA_001311075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/075/GCA_001311075.1_ASM131107v1	-	JCM 2765
Coriobacterium glomerans PW2	700015	PRJNA42699	42699	Terrabacteria group	Actinobacteria	2.11568	60.4	chromosome:NC_015389.1/CP002628.1	-	1	1856	1784	4/7/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713604	GCA_000195315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/315/GCA_000195315.1_ASM19531v1	-	PW2
Roseiflexus sp. RS-1	357808	PRJNA16190	16190	Terrabacteria group	Chloroflexi	5.8016	60.4	chromosome:NC_009523.1/CP000686.1	-	1	4822	4630	6/4/07	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598362	GCA_000016665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/665/GCA_000016665.1_ASM1666v1	-	RS-1
Lactobacillus manihotivorans DSM 13343 = JCM 12514	1423769	PRJNA222257	222257	Terrabacteria group	Firmicutes	3.12588	47.7	-	AZEU01	335	3084	2930	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369461	GCA_001435035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/035/GCA_001435035.1_ASM143503v1	26415554	DSM 13343
Lactobacillus pantheris DSM 15945 = JCM 12539 = NBRC 106106	1423783	PRJDB764	243676	Terrabacteria group	Firmicutes	2.53074	52.8	-	BBAI01	81	2520	1813	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00000433	GCA_001311175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/175/GCA_001311175.1_ASM131117v1	-	JCM 12539
Lactobacillus camelliae DSM 22697 = JCM 13995	1423730	PRJDB765	243677	Terrabacteria group	Firmicutes	2.54212	55.4	-	BBAJ01	161	2705	1740	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00000439	GCA_001311195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/195/GCA_001311195.1_ASM131119v1	-	JCM 13995
Lactococcus fujiensis JCM 16395	1291764	PRJDB767	243679	Terrabacteria group	Firmicutes	2.08832	36.9	-	BBAL01	49	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000452	GCA_001311235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/235/GCA_001311235.1_ASM131123v1	-	JCM 16395
Lactobacillus nasuensis JCM 17158	1291734	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.28024	57	-	AZDJ01	35	2193	2100	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369462	GCA_001434705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/705/GCA_001434705.1_ASM143470v1	26415554	JCM 17158
Lactobacillus equigenerosi DSM 18793 = JCM 14505	1423742	PRJDB774	243686	Terrabacteria group	Firmicutes	1.59318	42.6	-	BBAS01	38	1693	1171	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00000442	GCA_001311375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/375/GCA_001311375.1_ASM131137v1	-	JCM 14505
Lactobacillus rapi DSM 19907 = JCM 15042	1423795	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.85484	42.9	-	AZEI01	87	2715	2581	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369472	GCA_001436255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/255/GCA_001436255.1_ASM143625v1	26415554	DSM 19907
Lactobacillus floricola DSM 23037 = JCM 16512	1423744	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.28935	34.5	-	AYZL01	20	1282	1215	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369446	GCA_001436605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/605/GCA_001436605.1_ASM143660v1	26415554	DSM 23037
Lactobacillus ozensis DSM 23829 = JCM 17196	1423781	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.47995	31.9	-	AYYQ01	36	1484	1403	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369466	GCA_001435995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/995/GCA_001435995.1_ASM143599v1	26415554	DSM 23829
Thermus kawarayensis JCM 12314	1293587	PRJDB793	243705	Terrabacteria group	Deinococcus-Thermus	2.31549	68.1	-	BBBL01	714	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000431	GCA_001311545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/545/GCA_001311545.1_ASM131154v1	-	JCM 12314
Desulfothermus okinawensis JCM 13304	1293588	PRJDB794	243706	Proteobacteria	delta/epsilon subdivisions	2.77418	36	-	BBBM01	124	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000436	GCA_001311565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/565/GCA_001311565.1_ASM131156v1	-	JCM 13304
Lysinibacillus parviboronicapiens JCM 18861	1293591	PRJDB797	243708	Terrabacteria group	Firmicutes	4.72609	37.4	-	BBBP01	123	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000463	GCA_001311625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/625/GCA_001311625.1_ASM131162v1	-	JCM 18861
Pseudorhodoplanes sinuspersici	1235591	PRJNA385308	385308	Proteobacteria	Alphaproteobacteria	5.97161	60.3	chromosome:NZ_CP021112.1/CP021112.1	-	1	5786	5632	5/9/17	5/22/17	Complete Genome	Research institute of petroleum industry	SAMN06886414	GCA_002119765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/765/GCA_002119765.1_ASM211976v1	-	RIPI110
Lactobacillus kefiri DSM 20587 = JCM 5818	1423764	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.22933	41.7	-	AYYV01	95	2106	2006	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369455	GCA_001436175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/175/GCA_001436175.1_ASM143617v1	26415554	DSM 20587
Lentibacillus juripiscarius JCM 12147	1293599	PRJDB808	243719	Terrabacteria group	Firmicutes	3.2083	44.1	-	BBCA01	139	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000425	GCA_001311805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/805/GCA_001311805.1_ASM131180v1	-	JCM 12147
Desulfovibrio brasiliensis JCM 12178	1294020	PRJDB810	243720	Proteobacteria	delta/epsilon subdivisions	3.5651	59.7	-	BBCB01	182	3482	2869	10/1/15	4/16/17	Contig	The University of Tokyo	SAMD00000426	GCA_001311825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/825/GCA_001311825.1_ASM131182v1	-	JCM 12178
Desulfosarcina cetonica JCM 12296	1294021	PRJDB811	252061	Proteobacteria	delta/epsilon subdivisions	7.09233	55.7	-	BBCC01	558	7020	5582	10/1/15	4/16/17	Contig	The University of Tokyo	SAMD00000427	GCA_001311845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/845/GCA_001311845.1_ASM131184v1	-	JCM 12296
Piscibacillus salipiscarius JCM 13188	1294022	PRJDB812	243721	Terrabacteria group	Firmicutes	2.99976	37.1	-	BBCD01	63	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000435	GCA_001311865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/865/GCA_001311865.1_ASM131186v1	-	JCM 13188
Syntrophomonas palmitatica JCM 14374	1294023	PRJDB813	243722	Terrabacteria group	Firmicutes	2.58143	45.4	-	BBCE01	61	2568	2160	10/1/15	4/16/17	Contig	The University of Tokyo	SAMD00000441	GCA_001311885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/885/GCA_001311885.1_ASM131188v1	-	JCM 14374
Calditerricola satsumensis JCM 14719	1294024	PRJDB814	243723	Terrabacteria group	Firmicutes	2.22217	63.7	-	BBCF01	603	2512	1672	10/1/15	4/16/17	Contig	The University of Tokyo	SAMD00000444	GCA_001311905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/905/GCA_001311905.1_ASM131190v1	-	JCM 14719
Cellulosilyticum ruminicola JCM 14822	1294025	PRJDB815	243724	Terrabacteria group	Firmicutes	4.061	32.8	-	BBCG01	194	3844	3333	10/1/15	4/16/17	Contig	The University of Tokyo	SAMD00000445	GCA_001311925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/925/GCA_001311925.1_ASM131192v1	-	JCM 14822
Aciditerrimonas ferrireducens JCM 15389	1294026	PRJDB816	243725	Terrabacteria group	Actinobacteria	1.17694	70.1	-	BBCH01	1004	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000525	GCA_001311945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/945/GCA_001311945.1_ASM131194v1	-	JCM 15389
Thermaerobacter composti JCM 15650	1294259	PRJDB817	243726	Terrabacteria group	Firmicutes	1.08577	68.5	-	BBCI01	923	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000529	GCA_001311965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/965/GCA_001311965.1_ASM131196v1	-	JCM 15650
Geobacter toluenoxydans JCM 15764	1294260	PRJDB818	243727	Proteobacteria	delta/epsilon subdivisions	4.20736	53.6	-	BBCJ01	77	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000530	GCA_001311985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/985/GCA_001311985.1_ASM131198v1	-	JCM 15764
Methylomonas koyamae JCM 16701	1294261	PRJDB819	243728	Proteobacteria	Gammaproteobacteria	4.95415	56.1	-	BBCK01	382	4917	3256	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00000536	GCA_001312005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/005/GCA_001312005.1_ASM131200v1	-	JCM 16701
Lactobacillus saniviri JCM 17471 = DSM 24301	1293598	PRJDB805	243716	Terrabacteria group	Firmicutes	2.42075	47.8	-	BBBX01	67	2649	1804	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00000457	GCA_001311785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/785/GCA_001311785.1_ASM131178v1	-	JCM 17471
Lactobacillus satsumensis DSM 16230 = JCM 12392	1423801	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.63965	39.9	-	AZFQ01	55	2484	2396	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369510	GCA_001435195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/195/GCA_001435195.1_ASM143519v1	26415554	DSM 16230
Lactobacillus senioris DSM 24302 = JCM 17472	1423802	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.56679	39.1	-	AYZR01	9	1608	1541	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369415	GCA_001436555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/555/GCA_001436555.1_ASM143655v1	26415554	DSM 24302
Thermodesulfovibrio aggregans	86166	PRJDB4394	304721	Nitrospirae	Nitrospira	1.99765	35.1	-	BCNO01	3	2048	1955	1/9/16	4/11/17	Scaffold	AIST	SAMD00043587	GCA_001514535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/535/GCA_001514535.1_ASM151453v1	26966200	TGE-P1
Lysinibacillus pakistanensis	759811	PRJDB846	243747	Terrabacteria group	Firmicutes	5.00936	36.3	-	BBDJ01	73	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000462	GCA_001312325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/325/GCA_001312325.1_ASM131232v1	-	JCM 18776
Methylogaea oryzae JCM 16910	493385	PRJDB848	243749	Proteobacteria	Gammaproteobacteria	3.69625	62.6	-	BBDL01	990	3954	2515	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00000538	GCA_001312345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/345/GCA_001312345.1_ASM131234v1	-	JCM 16910
Coprobacillus cateniformis JCM 10604	1297794	PRJDB862	243754	Terrabacteria group	Firmicutes	3.58541	31.4	-	BBDT01	101	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000513	GCA_001312445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/445/GCA_001312445.1_ASM131244v1	-	JCM 10604
Veillonella denticariosi JCM 15641	1298594	PRJDB870	243755	Terrabacteria group	Firmicutes	1.9816	43.1	-	BBDU01	20	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000527	GCA_001312465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/465/GCA_001312465.1_ASM131246v1	-	JCM 15641
Veillonella rogosae JCM 15642	1298595	PRJDB871	243756	Terrabacteria group	Firmicutes	2.14984	39	-	BBDV01	53	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000528	GCA_001312485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/485/GCA_001312485.1_ASM131248v1	-	JCM 15642
Ruminococcus faecis JCM 15917	1298596	PRJDB872	243757	Terrabacteria group	Firmicutes	3.25945	41.2	-	BBDW01	45	3206	2179	10/1/15	4/16/17	Contig	The University of Tokyo	SAMD00016811	GCA_001312505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/505/GCA_001312505.1_ASM131250v1	-	JCM 15917
Dysgonomonas hofstadii JCM 17038	1298597	PRJDB873	243758	FCB group	Bacteroidetes/Chlorobi group	5.03916	39.5	-	BBDX01	121	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016814	GCA_001312525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/525/GCA_001312525.1_ASM131252v1	-	JCM 17038
Byssovorax cruenta JCM 12614	1300159	PRJDB895	245944	Proteobacteria	delta/epsilon subdivisions	5.98731	66.6	-	BBEO01	4996	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016808	GCA_001312805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/805/GCA_001312805.1_ASM131280v1	-	JCM 12614
Lactobacillus collinoides DSM 20515 = JCM 1123	1423733	PRJNA222257	222257	Terrabacteria group	Firmicutes	3.61619	46.1	-	AYYR01	130	3249	3112	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369441	GCA_001435975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/975/GCA_001435975.1_ASM143597v1	26415554	DSM 20515
Pseudomonas fluorescens	294	PRJNA343408	343408	Proteobacteria	Gammaproteobacteria	5.84172	60.3	chromosome:NZ_CP017296.1/CP017296.1	-	1	5366	5179	9/28/16	4/5/17	Complete Genome	University of Delhi	SAMN05787338	GCA_001747385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/385/GCA_001747385.1_ASM174738v1	-	Pt14
Lactobacillus thailandensis DSM 22698 = JCM 13996	1423810	PRJDB898	243775	Terrabacteria group	Firmicutes	2.06248	53.4	-	BBER01	21	2066	1445	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00016810	GCA_001312865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/865/GCA_001312865.1_ASM131286v1	-	JCM 13996
Conexibacter sp. JCM 18997	1301082	PRJDB908	243780	Terrabacteria group	Actinobacteria	1.78374	68.6	-	BBFB01	1736	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016827	GCA_001313025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/025/GCA_001313025.1_ASM131302v1	-	JCM 18997
Silvimonas sp. JCM 19000	1301084	PRJDB910	243781	Proteobacteria	Betaproteobacteria	4.69467	59.6	-	BBFD01	785	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016830	GCA_001313065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/065/GCA_001313065.1_ASM131306v1	-	JCM 19000
Gracilibacillus sp. JCM 18966	1302245	PRJDB919	243783	Terrabacteria group	Firmicutes	4.11848	36.9	-	BBFF01	111	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016825	GCA_001313105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/105/GCA_001313105.1_ASM131310v1	-	JCM 18966
Pseudomonas stutzeri	316	PRJNA321299	321299	Proteobacteria	Gammaproteobacteria	5.03094	60.3	chromosome:NZ_CP015641.1/CP015641.1	-	1	4687	4517	5/18/16	4/5/17	Complete Genome	"Institute of Oceanology, Chinese Academy of Sciences"	SAMN04979180	GCA_001648195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/195/GCA_001648195.1_ASM164819v1	-	273
Lactobacillus odoratitofui DSM 19909 = JCM 15043	1423776	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.75194	44.2	-	AZEE01	31	2439	2350	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369464	GCA_001434895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/895/GCA_001434895.1_ASM143489v1	26415554	DSM 19909
Lactobacillus kimchicus JCM 15530	1302272	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.59327	46.6	-	AZCX01	45	2507	2456	11/6/15	4/11/17	Contig	Shanghai Majorbio	SAMN02369456	GCA_001433995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/995/GCA_001433995.1_ASM143399v1	26415554	JCM 15530
Lactobacillus silagei JCM 19001	1302250	PRJDB4275	391104	Terrabacteria group	Firmicutes	2.67204	44.9	-	BCMG01	87	2475	2372	6/13/17	7/15/17	Scaffold	NARO Institute of Livestock and Grassland Science	SAMD00042396	GCA_002217945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/945/GCA_002217945.1_ASM221794v1	-	IWT126
Algoriphagus boritolerans DSM 17298 = JCM 18970	1120964	PRJDB928	243789	FCB group	Bacteroidetes/Chlorobi group	4.85086	42.6	-	BBFN01	160	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016945	GCA_001313265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/265/GCA_001313265.1_ASM131326v1	-	JCM 18970
Agromyces ulmi JCM 13315	1302723	PRJDB930	243790	Terrabacteria group	Actinobacteria	2.22915	68.5	-	BBFP01	1584	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016930	GCA_001313305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/305/GCA_001313305.1_ASM131330v1	-	JCM 13315
Streptomyces drozdowiczii JCM 13580	1302724	PRJDB931	245954	Terrabacteria group	Actinobacteria	3.13576	68.7	-	BBFQ01	2805	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016931	GCA_001313325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/325/GCA_001313325.1_ASM131332v1	-	JCM 13580
Microbacterium xylanilyticum JCM 13591	1302725	PRJDB932	245955	Terrabacteria group	Actinobacteria	2.56033	68.3	-	BBFR01	1774	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016932	GCA_001313345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/345/GCA_001313345.1_ASM131334v1	-	JCM 13591
Mycobacterium fluoranthenivorans JCM 14741	1303678	PRJDB935	245956	Terrabacteria group	Actinobacteria	5.50787	66.3	-	BBFT01	2548	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016935	GCA_001313385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/385/GCA_001313385.1_ASM131338v1	-	JCM 14741
Pseudonocardia tetrahydrofuranoxydans JCM 14745	1303679	PRJDB936	245957	Terrabacteria group	Actinobacteria	2.13495	68.8	-	BBFU01	1947	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016936	GCA_001313405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/405/GCA_001313405.1_ASM131340v1	-	JCM 14745
Rhodococcus phenolicus	263849	PRJNA306614	306614	Terrabacteria group	Actinobacteria	6.28391	68.4	-	LRRH01	232	5916	5600	5/18/16	4/12/17	Scaffold	Northumbria University	SAMN04357313	GCA_001646785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/646/785/GCA_001646785.1_ASM164678v1	-	DSM 44812
Agromyces mediolanus JCM 9631	1303686	PRJDB944	243793	Terrabacteria group	Actinobacteria	1.31435	68.4	-	BBGC01	1272	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016953	GCA_001313565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/565/GCA_001313565.1_ASM131356v1	-	JCM 9631
Nocardioides nitrophenolicus JCM 10703	1303688	PRJDB946	243794	Terrabacteria group	Actinobacteria	1.57067	68.2	-	BBGE01	1570	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016918	GCA_001313605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/605/GCA_001313605.1_ASM131360v1	-	JCM 10703
Nocardioides aromaticivorans JCM 11674	1305622	PRJDB955	245270	Terrabacteria group	Actinobacteria	1.68958	68.3	-	BBGL01	1610	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016922	GCA_001313745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/745/GCA_001313745.1_ASM131374v1	-	JCM 11674
Mycobacterium hodleri JCM 12141	1305625	PRJDB958	245272	Terrabacteria group	Actinobacteria	3.87437	66.3	-	BBGO01	2953	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016925	GCA_001313805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/805/GCA_001313805.1_ASM131380v1	-	JCM 12141
Pseudonocardia chloroethenivorans JCM 12679	1305626	PRJDB959	245273	Terrabacteria group	Actinobacteria	3.36502	68.8	-	BBGP01	3096	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016926	GCA_001313845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/845/GCA_001313845.1_ASM131384v1	-	JCM 12679
Streptomyces mexicanus JCM 12681	1305627	PRJDB960	245274	Terrabacteria group	Actinobacteria	2.08935	67.9	-	BBGQ01	2204	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016927	GCA_001313875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/875/GCA_001313875.1_ASM131387v1	-	JCM 12681
Nocardioides pyridinolyticus JCM 10369	1305854	PRJDB967	245276	Terrabacteria group	Actinobacteria	2.48681	69	-	BBGV01	1856	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016916	GCA_001313985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/985/GCA_001313985.1_ASM131398v1	-	JCM 10369
Xylanimicrobium pachnodae JCM 13526 = NBRC 107786	1305855	PRJDB968	243800	Terrabacteria group	Actinobacteria	2.06658	68.9	-	BBGW01	1541	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017007	GCA_001314005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/005/GCA_001314005.1_ASM131400v1	-	JCM 13526
Cellulomonas xylanilytica JCM 14281	1305856	PRJDB969	245277	Terrabacteria group	Actinobacteria	1.77814	69.6	-	BBGX01	1601	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017011	GCA_001314025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/025/GCA_001314025.1_ASM131402v1	-	JCM 14281
Cellulomonas composti JCM 14898	1305857	PRJDB970	243801	Terrabacteria group	Actinobacteria	1.28076	69.2	-	BBGY01	1142	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017013	GCA_001314045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/045/GCA_001314045.1_ASM131404v1	-	JCM 14898
Cellulomonas terrae JCM 14899	1305858	PRJDB971	245278	Terrabacteria group	Actinobacteria	1.83601	69.6	-	BBGZ01	1633	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017014	GCA_001314065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/065/GCA_001314065.1_ASM131406v1	-	JCM 14899
Brachybacterium zhongshanense JCM 15471	1305859	PRJDB972	245279	Terrabacteria group	Actinobacteria	1.95072	68.6	-	BBHA01	1613	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017015	GCA_001314085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/085/GCA_001314085.1_ASM131408v1	-	JCM 15471
Mycobacterium pyrenivorans JCM 15927	1305860	PRJDB973	245280	Terrabacteria group	Actinobacteria	5.13216	66.3	-	BBHB01	3188	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017016	GCA_001314105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/105/GCA_001314105.1_ASM131410v1	-	JCM 15927
Mycobacterium crocinum JCM 16369	1305862	PRJDB975	245281	Terrabacteria group	Actinobacteria	5.19057	65.8	-	BBHD01	2748	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017338	GCA_001314145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/145/GCA_001314145.1_ASM131414v1	-	JCM 16369
Pseudomonas azotoformans	47878	PRJNA312730	312730	Proteobacteria	Gammaproteobacteria	6.85962	60.3	chromosome:NZ_CP014546.1/CP014546.1	-	1	6429	6027	3/3/16	4/12/17	Complete Genome	China National Rice Research Institute	SAMN04505798	GCA_001579805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/805/GCA_001579805.1_ASM157980v1	-	S4
Nocardioides jensenii JCM 1364 = NBRC 14755	1303683	PRJDB1327	231384	Terrabacteria group	Actinobacteria	5.10214	68.9	-	BCRJ01	187	4985	4757	2/6/16	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00046513	GCA_001552535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/535/GCA_001552535.1_ASM155253v1	-	NBRC 14755
Mycobacterium rutilum	370526	PRJEB15815	347774	Terrabacteria group	Actinobacteria	5.98793	68.4	chromosome I:NZ_LT629971.1/LT629971.1	-	1	5829	5647	10/27/16	4/13/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489835	GCA_900108565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/565/GCA_900108565.1_IMG-taxon_2636415969_annotated_assembly	-	DSM 45405
Cellulomonas chitinilytica JCM 16927	1305865	PRJDB978	243802	Terrabacteria group	Actinobacteria	1.17108	69	-	BBHG01	1200	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017020	GCA_001314205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/205/GCA_001314205.1_ASM131420v1	-	JCM 16927
Methanoculleus sp. MAB1	86622	PRJEB12532	312076	Euryarchaeota	Methanomicrobia	2.8593	60.3	chromosome I:NZ_LT158599.1/LT158599.1	-	1	2765	2265	2/15/16	4/16/17	Complete Genome	SLU	SAMEA3857231	GCA_900036045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/045/GCA_900036045.1_Methanoculleus_sp_MAB1	-	-
Rhodobacteraceae bacterium HLUCCA24	1666918	PRJNA283228	283228	Proteobacteria	Alphaproteobacteria	0.405252	67.9	-	LKOZ01	145	540	537	10/14/15	6/23/16	Scaffold	Pacific Northwest National Laboratroy	SAMN03785501	GCA_001314535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/535/GCA_001314535.1_ASM131453v1	26497460	-
Bacteroidetes bacterium HLUCCA01	1666909	PRJNA283228	283228	FCB group	Bacteroidetes/Chlorobi group	3.37278	51.7	-	LIHN01	22	2749	2707	10/14/15	6/23/16	Contig	Pacific Northwest National Laboratroy	SAMN03785493	GCA_001314545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/545/GCA_001314545.1_HLUCCABin01.3	26497460	-
Idiomarinaceae bacterium HL-53	1298881	PRJEB11399	298559	Proteobacteria	Gammaproteobacteria	2.74012	47.5	chromosome I:NZ_LN899469.1/LN899469.1	-	1	2603	2498	11/5/15	4/11/17	Chromosome	DOE - Joint Genome Institute	SAMN02745934	GCA_001458075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/075/GCA_001458075.1_JGI_assembly	-	HL-53
Rhodobacteraceae bacterium HLUCCA08	1666913	PRJNA283228	283228	Proteobacteria	Alphaproteobacteria	3.69854	67.6	-	LJSF01	45	3730	3684	10/14/15	6/23/16	Scaffold	Pacific Northwest National Laboratroy	SAMN03785496	GCA_001314655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/655/GCA_001314655.1_ASM131465v1	26497460	-
Rhodobacteraceae bacterium HLUCCA09	1666915	PRJNA283228	283228	Proteobacteria	Alphaproteobacteria	4.13111	71.1	-	LJNT01	226	638	634	10/14/15	6/23/16	Scaffold	Pacific Northwest National Laboratroy	SAMN03785497	GCA_001314685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/685/GCA_001314685.1_ASM131468v1	26497460	-
Rhodobacteraceae bacterium HLUCCO07	1666914	PRJNA283228	283228	Proteobacteria	Alphaproteobacteria	3.42688	63.8	-	LJSU01	35	3351	3304	10/14/15	6/23/16	Scaffold	Pacific Northwest National Laboratroy	SAMN03785505	GCA_001314705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/705/GCA_001314705.1_ASM131470v1	26497460	-
Rhodobacteraceae bacterium HLUCCA12	1666916	PRJNA283228	283228	Proteobacteria	Alphaproteobacteria	3.72551	65.1	-	LJSV01	52	3651	3603	10/14/15	6/23/16	Scaffold	Pacific Northwest National Laboratroy	SAMN03785499	GCA_001314715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/715/GCA_001314715.1_ASM131471v1	26497460	-
Erythrobacteraceae bacterium HL-111	1666908	PRJNA283228	283228	Proteobacteria	Alphaproteobacteria	3.03678	68.4	-	LJSW01	63	2919	2870	10/14/15	6/23/16	Scaffold	Pacific Northwest National Laboratroy	SAMN03785506	GCA_001314765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/765/GCA_001314765.1_ASM131476v1	26497460	-
Rhizobiales bacterium HL-109	1653334	PRJEB15026	336294	Proteobacteria	Alphaproteobacteria	4.18455	64.2	-	FMBM01	3	3779	3584	8/4/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428994	GCA_900094735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/735/GCA_900094735.1_IMG-taxon_2634166172_annotated_assembly	-	HL-109
Streptomyces naganishii JCM 4654	1306179	PRJDB989	245290	Terrabacteria group	Actinobacteria	3.84472	69.4	-	BBHR01	3245	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017029	GCA_001315425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/425/GCA_001315425.1_ASM131542v1	-	JCM 4654
Streptomyces anandii JCM 4720	1306180	PRJDB990	245292	Terrabacteria group	Actinobacteria	3.67337	69	-	BBHS01	3180	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017030	GCA_001315445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/445/GCA_001315445.1_ASM131544v1	-	JCM 4720
Streptomyces chrestomyceticus JCM 4735	1306181	PRJDB991	245293	Terrabacteria group	Actinobacteria	2.38897	67.2	-	BBHT01	2479	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017031	GCA_001315465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/465/GCA_001315465.1_ASM131546v1	-	JCM 4735
Streptomyces phaeofaciens JCM 4814	1306182	PRJDB992	245294	Terrabacteria group	Actinobacteria	4.95096	68.4	-	BBHU01	4238	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017032	GCA_001315485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/485/GCA_001315485.1_ASM131548v1	-	JCM 4814
Cellulomonas pakistanensis	992287	PRJDB995	243808	Terrabacteria group	Actinobacteria	0.715138	69.4	-	BBHV01	739	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017023	GCA_001315505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/505/GCA_001315505.1_ASM131550v1	-	JCM 18755
Catenuloplanes crispus JCM 9312	1307448	PRJDB997	245296	Terrabacteria group	Actinobacteria	3.31556	66.9	-	BBHX01	3262	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017034	GCA_001315545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/545/GCA_001315545.1_ASM131554v1	-	JCM 9312
Catenuloplanes niger JCM 9533	1307449	PRJDB998	245297	Terrabacteria group	Actinobacteria	2.32527	67.2	-	BBHY01	2355	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017035	GCA_001315565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/565/GCA_001315565.1_ASM131556v1	-	JCM 9533
Catenuloplanes indicus JCM 9534	1307450	PRJDB999	245298	Terrabacteria group	Actinobacteria	2.12821	66.8	-	BBHZ01	2220	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017036	GCA_001315585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/585/GCA_001315585.1_ASM131558v1	-	JCM 9534
Catenuloplanes atrovinosus JCM 9535	1307451	PRJDB1000	245299	Terrabacteria group	Actinobacteria	1.90239	67	-	BBIA01	1995	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017037	GCA_001315605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/605/GCA_001315605.1_ASM131560v1	-	JCM 9535
Catenuloplanes nepalensis JCM 9536	1307452	PRJDB1001	245300	Terrabacteria group	Actinobacteria	2.63632	66.8	-	BBIB01	2690	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017038	GCA_001315625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/625/GCA_001315625.1_ASM131562v1	-	JCM 9536
Catenuloplanes castaneus JCM 9537	1307453	PRJDB1002	245967	Terrabacteria group	Actinobacteria	2.01041	66.9	-	BBIC01	2085	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017039	GCA_001315645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/645/GCA_001315645.1_ASM131564v1	-	JCM 9537
Kineosporia rhamnosa JCM 9954	1307454	PRJDB1003	245968	Terrabacteria group	Actinobacteria	7.0645	67.6	-	BBID01	3997	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017040	GCA_001315665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/665/GCA_001315665.1_ASM131566v1	-	JCM 9954
Kineosporia succinea JCM 9957	1307455	PRJDB1004	245969	Terrabacteria group	Actinobacteria	3.53279	67.5	-	BBIE01	3157	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017041	GCA_001315685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/685/GCA_001315685.1_ASM131568v1	-	JCM 9957
Kineosporia rhizophila JCM 9960	1307456	PRJDB1005	243809	Terrabacteria group	Actinobacteria	6.60305	69.1	-	BBIF01	3674	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017042	GCA_001315705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/705/GCA_001315705.1_ASM131570v1	-	JCM 9960
Kineosporia mikuniensis JCM 9961	1307457	PRJDB1006	243810	Terrabacteria group	Actinobacteria	0.902075	63.3	-	BBIG01	1095	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017043	GCA_001315725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/725/GCA_001315725.1_ASM131572v1	-	JCM 9961
Metallosphaera hakonensis JCM 8857	1293036	PRJDB782	243694	TACK group	Crenarchaeota	2.38791	43.3	-	BBBA01	129	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000474	GCA_001315825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/825/GCA_001315825.1_ASM131582v1	-	JCM 8857
Terriglobus roseus DSM 18391	926566	PRJNA63509	63509	Acidobacteria	Acidobacteriia	5.22786	60.3	chromosome:NC_018014.1/CP003379.1	-	1	4356	4239	6/8/12	5/19/17	Complete Genome	JGI	SAMN02261411	GCA_000265425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/425/GCA_000265425.1_ASM26542v1	-	DSM 18391
Rhodobacteraceae bacterium HLUCCO18	1666917	PRJNA283228	283228	Proteobacteria	Alphaproteobacteria	3.68459	67.1	-	LJSY01	87	3724	3678	10/14/15	6/23/16	Scaffold	Pacific Northwest National Laboratroy	SAMN03785509	GCA_001314805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/805/GCA_001314805.1_ASM131480v1	26497460	-
Phormidesmis priestleyi ULC007	1920490	PRJNA353984	353984	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.68439	48.6	-	MPPI01	118	5370	5079	12/9/16	4/16/17	Scaffold	University of Liege	SAMN06036084	GCA_001895925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/925/GCA_001895925.1_ASM189592v1	-	ULC007
Cellulomonas persica JCM 18111	1305867	PRJDB980	243804	Terrabacteria group	Actinobacteria	0.821903	69	-	BBHI01	844	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017022	GCA_001315245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/245/GCA_001315245.1_ASM131524v1	-	JCM 18111
Cellulomonas hominis JCM 12133	1305868	PRJDB981	243805	Terrabacteria group	Actinobacteria	0.84521	69.5	-	BBHJ01	892	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017006	GCA_001315265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/265/GCA_001315265.1_ASM131526v1	-	JCM 12133
Cellulomonas denverensis JCM 14733	1305869	PRJDB982	243806	Terrabacteria group	Actinobacteria	1.43844	69.2	-	BBHK01	1295	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017012	GCA_001315285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/285/GCA_001315285.1_ASM131528v1	-	JCM 14733
Streptomyces albofaciens JCM 4342	1306175	PRJDB985	245286	Terrabacteria group	Actinobacteria	4.34566	68.8	-	BBHN01	3820	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017025	GCA_001315345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/345/GCA_001315345.1_ASM131534v1	-	JCM 4342
Streptomyces lucensis JCM 4490	1306176	PRJDB986	245287	Terrabacteria group	Actinobacteria	3.97204	68.9	-	BBHO01	3223	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017026	GCA_001315365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/365/GCA_001315365.1_ASM131536v1	-	JCM 4490
Streptomyces misionensis	67331	PRJEB16412	349361	Terrabacteria group	Actinobacteria	8.47372	72.4	-	FNTD01	5	7627	7278	10/22/16	4/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04490357	GCA_900104815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/815/GCA_900104815.1_IMG-taxon_2634166373_annotated_assembly	-	DSM 40306
Roseibaca calidilacus	1666912	PRJEB12375	308718	Proteobacteria	Alphaproteobacteria	3.35464	61.8	-	FBYC01	4	3260	3143	1/14/16	4/11/17	Contig	DOE - Joint Genome Institute	SAMN04386380	GCA_001517585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/585/GCA_001517585.1_IMG-taxon_2603880215_annotated_assembly	-	HL-91
Bifidobacterium longum subsp. longum JCM 1217	565042	PRJDA32047	32047	Terrabacteria group	Actinobacteria	2.38516	60.3	chromosome:NC_015067.1/AP010888.1	-	1	2090	1920	1/29/11	3/30/17	Complete Genome	"University of Tokyo, Graduate School of Frontier Sciences"	SAMD00060951	GCA_000196555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/555/GCA_000196555.1_ASM19655v1	21270894	JCM 1217
Thermocladium modestius JCM 10088	1293040	PRJDB787	243699	TACK group	Crenarchaeota	1.92027	53.1	-	BBBF01	118	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000407	GCA_001315925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/925/GCA_001315925.1_ASM131592v1	-	JCM 10088
Methanogenium cariaci JCM 10550	1293041	PRJDB788	243700	Euryarchaeota	Methanomicrobia	2.68664	52.1	-	BBBG01	52	3285	2258	10/1/15	4/16/17	Contig	The University of Tokyo	SAMD00000408	GCA_001315945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/945/GCA_001315945.1_ASM131594v1	-	JCM 10550
Methanoculleus chikugoensis	118126	PRJEB15169	357889	Euryarchaeota	Methanomicrobia	2.64916	61.8	-	FMID01	70	2699	2552	12/16/16	4/16/17	Contig	CEBITEC	SAMEA4384483	GCA_900095385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/385/GCA_900095385.1_L21	-	-
Lactobacillus wasatchensis	1335616	PRJNA203424	203424	Terrabacteria group	Firmicutes	1.90425	39.8	-	AWTT01	105	1872	1722	2/17/15	4/10/17	Contig	Utah State University	SAMN03351325	GCA_000876205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/205/GCA_000876205.1_ASM87620v1	-	WDC04
Caloranaerobacter sp. TR13	1302151	PRJNA272569	272569	Terrabacteria group	Firmicutes	2.26188	29.5	-	JXLL01	52	2179	2140	10/15/15	4/11/17	Contig	"Third Institute of Oceanography, State Oceanic Administration"	SAMN03283895	GCA_001316435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/435/GCA_001316435.1_ASM131643v1	26679595	TR13
Candidatus Methanoperedens sp. BLZ1	1719120	PRJNA296416	296416	Euryarchaeota	Methanomicrobia	3.73847	40.2	-	LKCM01	514	4562	4528	10/15/15	11/10/15	Contig	Radboud University Nijmegen	SAMN04087218	GCA_001317315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/315/GCA_001317315.1_ASM131731v1	-	-
Oxobacter pfennigii	36849	PRJNA297260	297260	Terrabacteria group	Firmicutes	4.51055	39	-	LKET01	69	4324	4146	10/16/15	4/16/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04121004	GCA_001317355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/355/GCA_001317355.1_ASM131735v1	26634756	DSM 3222
Desulfurivibrio alkaliphilus AHT 2	589865	PRJNA33629	33629	Proteobacteria	delta/epsilon subdivisions	3.09776	60.3	chromosome:NC_014216.1/CP001940.1	-	1	2734	2643	5/27/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598502	GCA_000092205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/205/GCA_000092205.1_ASM9220v1	-	AHT 2
Marinosulfonomonas sp. PRT-SC04	1527300	PRJNA257346	257346	Proteobacteria	Alphaproteobacteria	1.72256	54.3	-	JPUR01	393	1741	1640	10/16/15	10/16/15	Contig	"Scripps Institution of Oceanography, UC San Diego"	SAMN02941853	GCA_001321835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/835/GCA_001321835.1_ASM132183v1	-	-
SAR11 cluster bacterium PRT-SC02	1527298	PRJNA257344	257344	Proteobacteria	Alphaproteobacteria	0.660226	29.4	-	JPUP01	100	722	694	10/16/15	10/16/15	Contig	"Scripps Institution of Oceanography, UC San Diego"	SAMN02941851	GCA_001321855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/855/GCA_001321855.1_ASM132185v1	-	-
Paraliobacillus sp. PM-2	1462524	PRJEB5513	245004	Terrabacteria group	Firmicutes	2.92543	34.8	-	CTEI01	3	2822	2717	4/21/15	7/29/17	Contig	URMITE	SAMEA3309463	GCA_001368815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/815/GCA_001368815.1_PRJEB5513_assembly_1	-	PM-2
Moorella glycerini	55779	PRJEB8377	274762	Terrabacteria group	Firmicutes	3.57781	53.8	-	CELZ01	73	3657	3432	3/21/15	4/16/17	Scaffold	WAGENINGEN UNIVERSITY	SAMEA3232992	GCA_001373375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/375/GCA_001373375.1_strain_NMP_1	-	NMP
Mycobacterium lentiflavum	141349	PRJEB8430	275401	Terrabacteria group	Actinobacteria	6.81851	65.8	-	CTEE01	5	6372	6116	3/25/15	8/1/17	Contig	URMITE	SAMEA3305053	GCA_001373395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/395/GCA_001373395.1_PRJEB8430_assembly_1	-	CSUR P1491
Arthrobacter koreensis	199136	PRJEB8453	280879	Terrabacteria group	Actinobacteria	3.45418	65.9	-	CECE01	27	3188	3078	4/11/15	8/1/17	Contig	University of Granada	SAMEA3249780	GCA_001373495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/495/GCA_001373495.1_Arthrobacter_koreensis_5J12A	-	5J12A
Mycobacterium europaeum	761804	PRJEB8464	275403	Terrabacteria group	Actinobacteria	6.15252	68.2	-	CTEC01	13	5879	5610	3/25/15	7/29/17	Contig	URMITE	SAMEA3305049	GCA_001373515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/515/GCA_001373515.1_PRJEB8464_assembly_1	-	CSUR P1344
bacterium SIT6	1522318	PRJEB8803	278325	unclassified Bacteria	unclassified Bacteria (miscellaneous)	2.78464	35.2	-	CTDX01	16	2631	2514	3/25/15	6/15/17	Contig	URMITE	SAMEA3305044	GCA_001375515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/515/GCA_001375515.1_Rubiinfantum_massiliensis	-	SIT6
Bacillus niameyensis	1522308	PRJEB8804	278326	Terrabacteria group	Firmicutes	4.68422	37.9	-	CTDY01	6	4330	4125	3/25/15	4/17/17	Scaffold	URMITE	SAMEA3305050	GCA_001375535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/535/GCA_001375535.1_Bacillus_niameyensis	-	SIT3
Numidum massiliense	1522315	PRJEB8811	278328	Terrabacteria group	Firmicutes	3.75574	50.9	-	CTDZ01	9	3423	3299	3/25/15	4/11/17	Contig	URMITE	SAMEA3305383	GCA_001375555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/555/GCA_001375555.1_Numidum_massiliensis	-	mt3
Phenylobacterium immobile (ATCC 35973)	31967	PRJEB8888	280192	Proteobacteria	Alphaproteobacteria	3.32857	66.7	-	CVJQ01	6	3248	3148	4/2/15	8/1/17	Contig	Institute of Technical Biochemistry	SAMEA3309515	GCA_001375595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/595/GCA_001375595.1_Draft_genome_of_P._immobile_strain_E_DSM_1986_	-	(strain E)
Massilibacterium senegalense	1632858	PRJEB8950	280372	Terrabacteria group	Firmicutes	2.84941	35.7	-	CTRN01	10	2892	2724	4/4/15	4/11/17	Scaffold	URMITE	SAMEA3312309	GCA_001375675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/675/GCA_001375675.1_Massilibacterium_senegalense	-	mt8
Vulcanisaeta souniana JCM 11219	1293586	PRJDB792	243704	TACK group	Crenarchaeota	2.43279	45.5	-	BBBK01	58	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000417	GCA_001316025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/025/GCA_001316025.1_ASM131602v1	-	JCM 11219
Sulfolobus metallicus DSM 6482 = JCM 9184	523847	PRJDB806	243717	TACK group	Crenarchaeota	2.21463	38.6	-	BBBY01	167	2507	1776	10/1/15	4/16/17	Contig	The University of Tokyo	SAMD00000478	GCA_001316045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/045/GCA_001316045.1_ASM131604v1	-	JCM 9184
Thermogymnomonas acidicola JCM 13583	1295120	PRJDB825	243731	Euryarchaeota	Thermoplasmata	1.74238	56.4	-	BBCP01	27	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000520	GCA_001316105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/105/GCA_001316105.1_ASM131610v1	-	JCM 13583
Natronolimnobius baerhuensis	253108	PRJNA376655	376655	Euryarchaeota	Halobacteria	3.9143	60.2	-	MWPH01	8	3798	3654	6/8/17	6/10/17	Contig	Chinese Academy of Agricultural Sciences	SAMN06445343	GCA_002177135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/135/GCA_002177135.1_ASM217713v1	-	CGMCC 1.3597
Alicyclobacillus ferrooxydans	471514	PRJNA294427	294427	Terrabacteria group	Firmicutes	5.04418	51.3	-	LJCO01	109	4731	4541	10/19/15	4/16/17	Contig	California Institute of Technology	SAMN04025529	GCA_001399675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/675/GCA_001399675.1_ASM139967v1	-	TC-34
Acidiplasma aeolicum	507754	PRJNA295645	295645	Euryarchaeota	Thermoplasmata	1.7789	34	-	LKBG01	296	1869	1711	10/22/15	4/17/17	Contig	RIPCM	SAMN04087216	GCA_001402945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/945/GCA_001402945.1_ASM140294v1	-	VT
Kouleothrix aurantiaca	186479	PRJNA271545	271545	Terrabacteria group	Chloroflexi	7.79834	62.5	-	LJCR01	3843	8724	7843	10/19/15	10/19/15	Contig	California Institute of Technology	SAMN03274861	GCA_001399705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/705/GCA_001399705.1_ASM139970v1	-	COM-B
Candidatus Bathyarchaeota archaeon BA2	1700836	PRJNA291107	291107	TACK group	Candidatus Bathyarchaeota	1.45569	44.2	-	LIHK01	57	1781	1761	10/19/15	10/27/15	Scaffold	University of Queensland	SAMN03983875	GCA_001399795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/795/GCA_001399795.1_ASM139979v1	26494757	-
Candidatus Bathyarchaeota archaeon BA1	1700835	PRJNA291107	291107	TACK group	Candidatus Bathyarchaeota	1.93171	47.1	-	LIHJ01	89	2414	2403	10/19/15	10/27/15	Scaffold	University of Queensland	SAMN03983874	GCA_001399805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/805/GCA_001399805.1_ASM139980v1	26494757	-
Pseudomonas caricapapayae	46678	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	6.25767	58.3	-	LJPW01	193	5955	5560	10/20/15	4/16/17	Scaffold	University of Toronto	SAMN03976290	GCA_001400735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/735/GCA_001400735.1_PcaICMP2855	-	ICMP2855
Pseudomonas congelans	200452	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.63065	59.4	-	LJQB01	86	5165	4875	10/20/15	4/11/17	Scaffold	University of Toronto	SAMN03976302	GCA_001400775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/775/GCA_001400775.1_PcoICMP19117	-	ICMP19117
Acidiplasma cupricumulans	312540	PRJNA295646	295646	Euryarchaeota	Thermoplasmata	1.73108	34.2	-	LKBH01	312	1800	1683	10/22/15	4/17/17	Contig	RIPCM	SAMN04087217	GCA_001402935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/935/GCA_001402935.1_ASM140293v1	-	BH2
Thiohalorhabdus denitrificans	381306	PRJNA294428	294428	Proteobacteria	Gammaproteobacteria	2.86901	68.9	-	LJCP01	15	2728	2649	10/19/15	4/11/17	Contig	California Institute of Technology	SAMN04025648	GCA_001399755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/755/GCA_001399755.1_ASM139975v1	-	HL 19
Pseudomonas tremae	200454	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.92915	57.8	-	LJRO01	510	5483	5103	10/20/15	4/16/17	Scaffold	University of Toronto	SAMN03976253	GCA_001401155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/155/GCA_001401155.1_PtrICMP9151	-	ICMP9151
Vibrio hyugaensis	1534743	PRJDB3039	271954	Proteobacteria	Gammaproteobacteria	5.49466	44.9	-	BBLD01	71	5080	4855	1/7/15	4/10/17	Scaffold	University of Miyazaki	SAMD00019133	GCA_000818435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/435/GCA_000818435.1_ASM81843v1	25527835	090810a
Ruminococcaceae bacterium cv2	1627893	PRJEB10306	292880	Terrabacteria group	Firmicutes	4.26189	56.4	-	CYPT01	23	4230	3998	9/8/15	4/11/17	Scaffold	URMITE	SAMEA3528423	GCA_001403575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/403/575/GCA_001403575.1_Ihuella_massiliensis	-	cv2
Gabonia massiliensis	1686296	PRJEB10694	295041	FCB group	Bacteroidetes/Chlorobi group	4.26137	37.9	-	CYPV01	19	3337	3156	9/8/15	4/11/17	Scaffold	URMITE	SAMEA3529273	GCA_001403595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/403/595/GCA_001403595.1_Gabonia_massiliensis	-	GM3
Desnuesiella massiliensis	1650662	PRJEB10812	295455	Terrabacteria group	Firmicutes	5.5032	32.1	-	CYSK01	14	5265	5076	9/11/15	4/11/17	Scaffold	URMITE	SAMEA3538358	GCA_001403615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/403/615/GCA_001403615.1_Desnusiella_massiliensis	-	mt10
Mycobacterium peregrinum	43304	PRJEB10727	295381	Terrabacteria group	Actinobacteria	7.10984	66.2	-	CYSH01	6	6837	6561	9/11/15	4/11/17	Scaffold	URMITE	SAMEA3534845	GCA_001403655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/403/655/GCA_001403655.1_Mycobacterium_peregrinum	-	CSUR P2098
Aquimarina longa SW024	1379258	PRJNA213436	213436	FCB group	Bacteroidetes/Chlorobi group	5.5068	31.5	-	AVQK01	67	4739	4603	10/21/15	4/11/17	Scaffold	Ocean Uinversity of China	SAMN04202543	GCA_001401755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/755/GCA_001401755.1_ASM140175v1	26459873	SW024
Geobacter bemidjiensis Bem	404380	PRJNA17707	17707	Proteobacteria	delta/epsilon subdivisions	4.61515	60.3	chromosome:NC_011146.1/CP001124.1	-	1	4118	3969	8/19/08	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598400	GCA_000020725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/725/GCA_000020725.1_ASM2072v1	20828392	Bem
Pseudomonas ficuserectae	53410	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.65509	57.9	-	LJQJ01	624	5379	4538	10/20/15	8/8/17	Scaffold	University of Toronto	SAMN03976279	GCA_001400815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/815/GCA_001400815.1_PfiICMP7848	-	ICMP7848
Pseudomonas syringae pv. helianthi	251654	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	6.20854	58.1	-	LJQM01	277	5911	5405	10/20/15	4/11/17	Scaffold	University of Toronto	SAMN03976278	GCA_001400835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/835/GCA_001400835.1_PheICMP4531	-	ICMP4531
Jannaschia donghaensis	420998	PRJEB9969	296997	Proteobacteria	Alphaproteobacteria	3.487	64.6	-	CXSU01	13	3499	3377	9/24/15	4/16/17	Scaffold	UVEG	SAMEA3490732	GCA_001403795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/403/795/GCA_001403795.1_J.donghaensisCECT7802_Velvet_Prokka	-	CECT 7802
Labrenzia alba	311410	PRJEB10022	297301	Proteobacteria	Alphaproteobacteria	5.99325	53.8	-	CXTY01	41	5607	5483	9/29/15	4/11/17	Contig	UVEG	SAMEA3493278	GCA_001404055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/055/GCA_001404055.1_L.albaCECT7551_Seqman_Prokka	-	CECT 7551
Faecalicatena contorta	39482	PRJEB10915	297013	Terrabacteria group	Firmicutes	5.54549	45.9	-	CYZU01	139	5185	4903	10/1/15	5/31/17	Contig	SC	SAMEA3545342	GCA_001404335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/335/GCA_001404335.1_13470_2_95	-	2789STDY5834876
Clostridium disporicum	84024	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.44956	28.8	-	CYZX01	57	3264	3108	10/1/15	4/17/17	Contig	SC	SAMEA3545322	GCA_001405015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/015/GCA_001405015.1_13470_2_75	-	2789STDY5834856
Jannaschia rubra	282197	PRJEB9955	296995	Proteobacteria	Alphaproteobacteria	3.66082	67.9	-	CXPG01	27	3617	3494	9/23/15	4/11/17	Contig	UVEG	SAMEA3489929	GCA_001403735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/403/735/GCA_001403735.1_J.rubraCECT5088_SeqMan_Prokka	-	CECT 5088
Fusicatenibacter saccharivorans	1150298	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.65389	47.1	-	CYYV01	40	3404	3176	10/1/15	4/11/17	Contig	SC	SAMEA3545257	GCA_001405555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/555/GCA_001405555.1_13414_6_33	-	2789STDY5608849
Clostridium ventriculi	1267	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.45726	27.2	-	CYZR01	31	2292	2185	10/1/15	4/11/17	Contig	SC	SAMEA3545324	GCA_001404895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/895/GCA_001404895.1_13470_2_77	-	2789STDY5834858
Flavobacterium aquidurense	362413	PRJNA260567	260567	FCB group	Bacteroidetes/Chlorobi group	5.34968	33.5	-	JRLF01	16	4545	4404	10/22/15	4/11/17	Contig	Yonsei University	SAMN03067762	GCA_001404985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/985/GCA_001404985.1_ASM140498v1	-	RC62
Lagierella massiliensis	1689303	PRJEB10921	298438	Terrabacteria group	Firmicutes	1.83231	32.5	-	CYUO01	5	1756	1666	10/11/15	4/11/17	Contig	URMITE	SAMEA3546014	GCA_001407835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/835/GCA_001407835.1_Lagierella_massiliensis	-	SIT14
Kocuria salsicia	664639	PRJEB9945	296993	Terrabacteria group	Actinobacteria	2.99958	70.4	-	CZJU01	199	2649	2411	10/13/15	4/16/17	Contig	Universitetsparken 15	SAMEA3489743	GCA_001408335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/408/335/GCA_001408335.1_Draft_genome_of_Kocuria_salsicia_G1	-	G1
Jannaschia seosinensis	313367	PRJEB10591	298870	Proteobacteria	Alphaproteobacteria	3.83332	65.3	-	CYPR01	253	3850	3315	10/15/15	4/16/17	Contig	UVEG	SAMEA3517096	GCA_001408515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/408/515/GCA_001408515.1_J.seosinensisCECT7799_CISA_Prokka	-	CECT 7799
Psychrobacter glacincola	56810	PRJNA293364	293364	Proteobacteria	Gammaproteobacteria	3.49065	42.8	-	LIQB01	18	2960	2861	10/23/15	9/15/17	Scaffold	Universidad de Santiago de Chile	SAMN04002326	GCA_001411745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/745/GCA_001411745.2_Psyc_v1	-	BNF20
Methanolinea sp. SDB	1735327	PRJNA293354	293354	Euryarchaeota	Methanomicrobia	2.16581	54.2	-	LKUF01	509	2344	2047	10/26/15	10/26/15	Contig	University of Oklahoma	SAMN04125648	GCA_001412335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/335/GCA_001412335.1_ASM141233v1	-	-
Candidatus Cloacimonas sp. SDB	1732214	PRJNA293354	293354	FCB group	Candidatus Cloacimonetes	2.93601	37.3	-	LKUH01	550	2575	2286	10/26/15	10/26/15	Contig	University of Oklahoma	SAMN04125647	GCA_001412425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/425/GCA_001412425.1_SDB_Consortium_Genome_Bin_4	-	-
Methanosaeta sp. SDB	1735328	PRJNA293354	293354	Euryarchaeota	Methanomicrobia	2.29859	58.1	-	LKUG01	1155	2536	1867	10/26/15	10/26/15	Contig	University of Oklahoma	SAMN04125649	GCA_001412415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/415/GCA_001412415.1_ASM141241v1	-	-
Lachnospira pectinoschiza	28052	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.7825	36	-	CZBT01	8	2539	2417	10/1/15	4/11/17	Contig	SC	SAMEA3545302	GCA_001405835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/835/GCA_001405835.1_13470_2_55	-	2789STDY5834836
Haloferax mediterranei ATCC 33500	523841	PRJNA43185	43185	Euryarchaeota	Halobacteria	3.90471	60.2551	chromosome:NC_017941.2/CP001868.2; plasmid pHM100:NC_017942.1/CP001869.1; plasmid pHM300:NC_017943.1/CP001870.1; plasmid pHM500:NC_017944.1/CP001871.1	-	4	3884	3761	5/22/12	4/9/17	Complete Genome	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN02603397	GCA_000306765.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/765/GCA_000306765.2_ASM30676v2	"2,224,712,722,843,590"	CGMCC 1.2087
Pseudomonas endophytica	1563157	PRJNA274345	274345	Proteobacteria	Gammaproteobacteria	4.97384	55.2	-	LLWH01	241	4648	4298	10/22/15	4/11/17	Contig	"Zentralinstitut fuer Ernaehrungs- und Lebensmittelforschung (ZIEL), WZW, TUM"	SAMN04193521	GCA_001411475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/475/GCA_001411475.1_ASM141147v1	25851593	BSTT44
Lachnospiraceae bacterium TF01-11	1703332	PRJNA298122	298122	Terrabacteria group	Firmicutes	3.61052	36.8	-	LLKB01	12	3123	2976	10/27/15	4/11/17	Scaffold	BGI-shenzhen	SAMN04155647	GCA_001414325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/325/GCA_001414325.1_ASM141432v1	-	TF01-11
Serratia marcescens	615	PRJNA357595	357595	Proteobacteria	Gammaproteobacteria	5.02459	60.2	chromosome:NZ_CP018923.1/CP018923.1	-	1	4734	4561	7/18/17	7/21/17	Complete Genome	University of Michigan	SAMN06164063	GCA_002220555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/555/GCA_002220555.1_ASM222055v1	28536292	UMH9
Streptomyces caatingaensis	1678637	PRJNA288757	288757	Terrabacteria group	Actinobacteria	7.05508	73.3	-	LFXA01	18	6139	5781	7/24/15	3/11/17	Contig	Kings College London	SAMN03837863	GCA_001187435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/435/GCA_001187435.1_ASM118743v1	26358601	CMAA 1322
Rhizobium ecuadorense	1671795	PRJNA287284	287284	Proteobacteria	Alphaproteobacteria	7.3835	61.1	-	LFIO01	1891	6790	6451	7/27/15	4/11/17	Contig	Embrapa Soja	SAMN03779945	GCA_001187535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/535/GCA_001187535.1_ASM118753v1	"2,376,491,326,383,660"	CNPSO 671
Candidatus Symbiothrix dinenymphae	467085	PRJDB3425	293966	FCB group	Bacteroidetes/Chlorobi group	1.17307	46	-	BBRU01	599	914	789	8/25/15	4/11/17	Contig	"Microbe Division (RIKEN BRC JCM), RIKEN BioResource Center"	SAMD00024443	GCA_001431085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/085/GCA_001431085.1_ASM143108v1	26079531	C5-4h
Bifidobacterium aesculapii	1329411	PRJDB4290	299560	Terrabacteria group	Actinobacteria	2.69349	64.8	-	BCFK01	93	2127	1989	10/22/15	4/11/17	Contig	Kyushu University	SAMD00042461	GCA_001417815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/815/GCA_001417815.1_ASM141781v1	26659692	DSM 26737
Mycobacterium gordonae	1778	PRJNA299467	299467	Terrabacteria group	Actinobacteria	7.60163	66.6	-	LQOY01	260	6906	6420	4/20/17	4/22/17	Contig	University of Trento	SAMN04216929	GCA_002101675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/675/GCA_002101675.1_ASM210167v1	-	DSM 44160
Bifidobacterium longum subsp. longum	1679	PRJNA316119	316119	Terrabacteria group	Actinobacteria	2.42129	60.2	chromosome:NZ_CP016019.1/CP016019.1	-	1	2179	2007	9/14/16	4/5/17	Complete Genome	University College Cork	SAMN04576213	GCA_001725985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/985/GCA_001725985.1_ASM172598v1	-	AH1206
Chelatococcus sambhunathii	363953	PRJNA289007	289007	Proteobacteria	Alphaproteobacteria	4.37382	67.8	-	LIOL01	35	4166	4016	10/28/15	4/11/17	Scaffold	Joint Genome Institute	SAMN03840667	GCA_001418005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/005/GCA_001418005.1_ASM141800v1	-	DSM 18167
Gulbenkiania indica	375574	PRJNA289009	289009	Proteobacteria	Betaproteobacteria	2.848	63.6	-	LION01	20	2773	2673	10/28/15	4/11/17	Scaffold	Joint Genome Institute	SAMN03840682	GCA_001418035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/035/GCA_001418035.1_ASM141803v1	-	DSM 17901
Lacinutrix mariniflava	342955	PRJNA239393	239393	FCB group	Bacteroidetes/Chlorobi group	3.97398	31.8	-	LIQG01	32	3527	3437	10/28/15	4/16/17	Contig	KORIA POLAR RESEARCH INSTITUTE	SAMN04002510	GCA_001418015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/015/GCA_001418015.1_ASM141801v1	26882010	AKS432
Anoxybacillus suryakundensis	1325335	PRJNA288979	288979	Terrabacteria group	Firmicutes	2.59466	41.5	-	LIOK01	41	2754	2586	10/28/15	4/11/17	Scaffold	DOE Joint Genome Institute	SAMN03840601	GCA_001418025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/025/GCA_001418025.1_ASM141802v1	-	DSM 27374
Lacinutrix himadriensis	641549	PRJNA293386	293386	FCB group	Bacteroidetes/Chlorobi group	4.16635	32.6	-	LIQI01	32	3662	3494	10/28/15	4/16/17	Contig	KOREA POLAR RESEARCH INSTITUTE	SAMN04002506	GCA_001418105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/105/GCA_001418105.1_ASM141810v1	26882010	E4-9a
Streptomyces almquistii	67270	PRJNA293375	293375	Terrabacteria group	Actinobacteria	7.37523	72.6	-	LIPO01	754	6491	5808	10/28/15	3/12/17	Scaffold	USDA/ARS/NCAUR	SAMN04002961	GCA_001418125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/125/GCA_001418125.1_ASM141812v1	-	NRRL B-1685
Marinomonas fungiae	1137284	PRJNA289015	289015	Proteobacteria	Gammaproteobacteria	4.18925	46.2	-	LIQF01	36	3926	3776	10/28/15	4/11/17	Scaffold	Joint Genome Institute	SAMN03840741	GCA_001418205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/205/GCA_001418205.1_ASM141820v1	-	JCM 18476
Pannonibacter indicus	466044	PRJNA288508	288508	Proteobacteria	Alphaproteobacteria	4.17068	63.5	-	LIPT01	36	3853	3674	10/28/15	4/11/17	Scaffold	DOE Joint Genome Institute	SAMN03801379	GCA_001418225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/225/GCA_001418225.1_ASM141822v1	-	DSM 23407
Tepidiphilus thermophilus	876478	PRJNA289016	289016	Proteobacteria	Hydrogenophilalia	2.25982	66.2	-	LIPU01	35	2248	2127	10/28/15	6/20/17	Scaffold	Joint Genome Institute	SAMN03840742	GCA_001418245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/245/GCA_001418245.1_ASM141824v1	-	JCM 19170
Thiomonas bhubaneswarensis	339866	PRJNA289011	289011	Proteobacteria	Betaproteobacteria	3.20343	65.1	-	LIPV01	23	3103	2974	10/28/15	4/11/17	Scaffold	Joint Genome Institute	SAMN03840739	GCA_001418255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/255/GCA_001418255.1_ASM141825v1	-	DSM 18181
Idiomarina woesei	1381080	PRJNA288988	288988	Proteobacteria	Gammaproteobacteria	2.43775	47.8	-	LIPW01	16	2353	2269	10/28/15	4/11/17	Scaffold	Joint Genome Institute	SAMN03840628	GCA_001418345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/345/GCA_001418345.1_ASM141834v1	-	DSM 27808
Streptomyces atriruber	545121	PRJNA293375	293375	Terrabacteria group	Actinobacteria	8.89288	71.3	-	LIPN01	703	8084	7401	10/28/15	3/12/17	Scaffold	USDA/ARS/NCAUR	SAMN04002960	GCA_001418325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/325/GCA_001418325.1_ASM141832v1	-	NRRL B-24165
Streptomyces alboniger	132473	PRJNA238534	238534	Terrabacteria group	Actinobacteria	2.05171	39.1	-	LMWE01	81	1947	1837	1/7/16	3/12/17	Contig	University of Illinois	SAMN03327479	GCA_001507305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/305/GCA_001507305.1_ASM150730v1	-	NRRL B-1832
Streptomyces diastatochromogenes	42236	PRJNA293375	293375	Terrabacteria group	Actinobacteria	9.11939	72.1	-	LIQL01	938	8344	7475	10/28/15	3/12/17	Scaffold	USDA/ARS/NCAUR	SAMN04003991	GCA_001418405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/405/GCA_001418405.1_ASM141840v1	-	NRRL B-1698
Streptomyces kanamyceticus	1967	PRJNA293375	293375	Terrabacteria group	Actinobacteria	9.78326	71	-	LIQU01	727	8703	7920	10/28/15	3/12/17	Scaffold	USDA/ARS/NCAUR	SAMN04004081	GCA_001418465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/465/GCA_001418465.1_ASM141846v1	-	NRRL B-2535
Streptomyces pathocidini	1650571	PRJNA293375	293375	Terrabacteria group	Actinobacteria	5.543	71.4	-	LIQY01	743	5069	4395	10/28/15	3/13/17	Scaffold	USDA/ARS/NCAUR	SAMN04004086	GCA_001418495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/495/GCA_001418495.1_ASM141849v1	-	NRRL B-24287
Streptomyces ossamyceticus	249581	PRJNA293375	293375	Terrabacteria group	Actinobacteria	9.29863	71.2	-	LIQX01	1008	8372	7359	10/28/15	3/12/17	Scaffold	USDA/ARS/NCAUR	SAMN04004085	GCA_001418475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/475/GCA_001418475.1_ASM141847v1	-	NRRL B-3822
Streptomyces flocculus	67300	PRJNA293375	293375	Terrabacteria group	Actinobacteria	7.42595	72.5	-	LIQO01	644	6429	5839	10/28/15	3/12/17	Scaffold	USDA/ARS/NCAUR	SAMN04003993	GCA_001418505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/505/GCA_001418505.1_ASM141850v1	-	NRRL B-2465
Streptomyces gibsonii	68208	PRJNA293375	293375	Terrabacteria group	Actinobacteria	6.96328	72.5	-	LIQP01	940	6239	5445	10/28/15	3/12/17	Scaffold	USDA/ARS/NCAUR	SAMN04003994	GCA_001418545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/545/GCA_001418545.1_ASM141854v1	-	NRRL B-1335
Streptomyces griseoplanus	66896	PRJNA293375	293375	Terrabacteria group	Actinobacteria	8.24542	72.5	-	LIQR01	802	7430	6670	10/28/15	3/12/17	Scaffold	USDA/ARS/NCAUR	SAMN04003996	GCA_001418575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/575/GCA_001418575.1_ASM141857v1	-	NRRL B-3064
Streptomyces graminilatus	1464070	PRJNA293375	293375	Terrabacteria group	Actinobacteria	9.60868	70.1	-	LIQQ01	859	8603	7737	10/28/15	3/12/17	Scaffold	USDA/ARS/NCAUR	SAMN04003995	GCA_001418565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/565/GCA_001418565.1_ASM141856v1	26739474	NRRL B-59124
Streptomyces griseoruber	1943	PRJNA293375	293375	Terrabacteria group	Actinobacteria	9.86899	71.5	-	LIQS01	963	9254	8019	10/28/15	3/13/17	Scaffold	USDA/ARS/NCAUR	SAMN04004079	GCA_001418585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/585/GCA_001418585.1_ASM141858v1	26739474	NRRL B-1818
Duganella sp. Root336D2	1736518	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	6.57947	62.3	-	LMDB01	39	6011	5832	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155787	GCA_001425005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/005/GCA_001425005.1_Root336D2	26633631	Root336D2
Streptomyces luridiscabiei	164114	PRJNA293375	293375	Terrabacteria group	Actinobacteria	7.92178	71.4	-	LIQV01	767	7283	6490	10/28/15	3/12/17	Scaffold	USDA/ARS/NCAUR	SAMN04004082	GCA_001418625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/625/GCA_001418625.1_ASM141862v1	-	NRRL B-24455
Streptomyces neyagawaensis	42238	PRJNA293375	293375	Terrabacteria group	Actinobacteria	9.13203	71.1	-	LIQW01	1411	8418	7208	10/28/15	3/12/17	Scaffold	USDA/ARS/NCAUR	SAMN04004083	GCA_001418645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/645/GCA_001418645.1_ASM141864v1	-	NRRL B-3092
Bifidobacterium animalis subsp. animalis	302912	PRJNA317592	317592	Terrabacteria group	Actinobacteria	2.02737	60.2	chromosome:NZ_CP015407.2/CP015407.2	-	1	1719	1566	7/20/16	4/17/17	Complete Genome	University of Bern	SAMN04621611	GCA_001688645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/645/GCA_001688645.2_ASM168864v2	-	YL2
Streptomyces hirsutus	35620	PRJNA293375	293375	Terrabacteria group	Actinobacteria	8.33545	71.1	-	LIPS01	811	7853	6686	10/28/15	9/5/17	Scaffold	USDA/ARS/NCAUR	SAMN04003009	GCA_001418175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/175/GCA_001418175.1_ASM141817v1	-	NRRL B-3040
Bifidobacterium longum subsp. longum	1679	PRJNA287222	287222	Terrabacteria group	Actinobacteria	2.458	60.2	chromosome:NZ_CP011965.1/CP011965.1	-	1	2184	2005	11/19/15	4/4/17	Complete Genome	University College Cork	SAMN03785819	GCA_001446275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/275/GCA_001446275.1_ASM144627v1	26489930	CCUG30698
Streptomyces torulosus	68276	PRJNA293375	293375	Terrabacteria group	Actinobacteria	9.8488	71.1	-	LIRK01	1055	8918	7796	10/29/15	3/12/17	Scaffold	USDA/ARS/NCAUR	SAMN04004093	GCA_001419765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/765/GCA_001419765.1_ASM141976v1	-	NRRL B-3889
Streptomyces niveiscabiei	164115	PRJNA293375	293375	Terrabacteria group	Actinobacteria	9.5495	71.2	-	LIRL01	1456	9042	7728	10/29/15	3/12/17	Scaffold	USDA/ARS/NCAUR	SAMN04004084	GCA_001419795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/795/GCA_001419795.1_ASM141979v1	-	NRRL B-24457
Kocuria kristinae NBRC 15354	1349768	PRJDB1352	231409	Terrabacteria group	Actinobacteria	2.35573	71.9	-	BCSM01	36	2089	1979	2/10/16	4/5/17	Contig	National Institute of Technology and Evaluation	SAMD00046484	GCA_001570865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/865/GCA_001570865.1_ASM157086v1	-	NBRC 15354
Streptomyces prasinus	67345	PRJNA293375	293375	Terrabacteria group	Actinobacteria	7.68031	72	-	LIPR01	796	6892	5945	10/28/15	9/5/17	Scaffold	USDA/ARS/NCAUR	SAMN04002974	GCA_001418165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/165/GCA_001418165.1_ASM141816v1	-	NRRL B-12521
Streptomyces prasinopilosus	67344	PRJNA293375	293375	Terrabacteria group	Actinobacteria	6.41692	72.6	-	LIRG01	1058	6105	5199	10/29/15	3/13/17	Scaffold	USDA/ARS/NCAUR	SAMN04004088	GCA_001419695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/695/GCA_001419695.1_ASM141969v1	-	NRRL B-2711
Ferrimonas balearica DSM 9799	550540	PRJNA30799	30799	Proteobacteria	Gammaproteobacteria	4.27916	60.2	chromosome:NC_014541.1/CP002209.1	-	1	3918	3746	9/24/10	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00115627	GCA_000148645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/645/GCA_000148645.1_ASM14864v1	21304747	DSM 9799
Chryseobacterium aquaticum	452084	PRJNA299561	299561	FCB group	Bacteroidetes/Chlorobi group	3.81318	33.9	-	LLYZ01	21	3477	3373	10/29/15	4/16/17	Contig	GCAT-SEEK	SAMN04210136	GCA_001420285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/285/GCA_001420285.1_ASM142028v1	-	KCTC 12483
Bosea thiooxidans	53254	PRJEB19714	377495	Proteobacteria	Alphaproteobacteria	5.36937	67.4	-	FUYX01	34	5104	4973	3/8/17	3/18/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05660750	GCA_900168195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/195/GCA_900168195.1_IMG-taxon_2595698224_annotated_assembly	-	DSM 9653
Bacillus plakortidis	444060	PRJNA294857	294857	Terrabacteria group	Firmicutes	3.96776	39.8	-	LJJD01	44	4014	3905	10/30/15	4/16/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04038056	GCA_001420645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/645/GCA_001420645.1_ASM142064v1	26847896	DSM 19153
Brevibacillus choshinensis	54911	PRJNA294855	294855	Terrabacteria group	Firmicutes	6.27909	48.4	-	LJJB01	16	6084	5789	10/30/15	4/16/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04038047	GCA_001420695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/695/GCA_001420695.1_ASM142069v1	26847894	DSM 8552
Bacillus shackletonii	157838	PRJNA294856	294856	Terrabacteria group	Firmicutes	5.29759	36.8	-	LJJC01	24	5118	4880	10/30/15	4/16/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04038048	GCA_001420715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/715/GCA_001420715.1_ASM142071v1	26847895	LMG 18435
Slackia heliotrinireducens DSM 20476	471855	PRJNA20831	20831	Terrabacteria group	Actinobacteria	3.16504	60.2	chromosome:NC_013165.1/CP001684.1	-	1	2820	2721	8/28/09	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598438	GCA_000023885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/885/GCA_000023885.1_ASM2388v1	21304663	DSM 20476
Vibrio galatheae	579748	PRJNA242743	242743	Proteobacteria	Gammaproteobacteria	4.0652	45.3	-	JXXV01	71	3763	3649	4/1/15	4/17/17	Contig	Technical University of Denmark	SAMN03323928	GCA_000967545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/545/GCA_000967545.1_S2757	25879706	S2757
Psychrobacillus sp. FJAT-21963	1712028	PRJNA294850	294850	Terrabacteria group	Firmicutes	4.10146	35.8	-	LJIY01	43	4133	3990	10/30/15	4/11/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04038044	GCA_001420585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/585/GCA_001420585.1_ASM142058v1	-	FJAT-21963
Thermus amyloliquefaciens	1449080	PRJNA234787	234787	Terrabacteria group	Deinococcus-Thermus	2.16086	67.4	-	JQMV01	6	2300	2071	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02745441	GCA_000744885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/885/GCA_000744885.1_ASM74488v1	-	YIM 77409
Synechococcus sp. WH 7803	32051	PRJNA13642	13642	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.36698	60.2	chromosome:NC_009481.1/CT971583.1	-	1	2528	2456	5/19/07	4/17/17	Complete Genome	Genoscope	SAMEA3138264	GCA_000063505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/063/505/GCA_000063505.1_ASM6350v1	-	-
Rhizobium acidisoli	1538158	PRJNA295402	295402	Proteobacteria	Alphaproteobacteria	7.36174	61.1	-	LJSR01	128	7159	6687	9/23/15	4/11/17	Contig	Laboratory of Microbial Ecology of the Escuela Nacional de Ciencias Biologicas	SAMN04053796	GCA_001297245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/245/GCA_001297245.1_ASM129724v1	-	FH23
Candidatus Bacteroides periocalifornicus	1702214	PRJNA289925	289925	FCB group	Bacteroidetes/Chlorobi group	2.51642	55.8	-	LIIK01	119	1869	1678	11/2/15	12/29/15	Contig	University of Washington	SAMN03859889	GCA_001421095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/095/GCA_001421095.1_SK_12B	26701081	-
Methanomassiliicoccales archaeon RumEn M2	1713725	PRJNA295008	295008	Euryarchaeota	Thermoplasmata	1.2808	54.6	-	LJKL01	18	1418	1175	11/2/15	11/2/15	Contig	University of Vienna	SAMN04038610	GCA_001421175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/175/GCA_001421175.1_ASM142117v1	-	-
Methanomassiliicoccales archaeon RumEn M1	1713724	PRJNA295008	295008	Euryarchaeota	Thermoplasmata	2.12103	62.1	-	LJKK01	182	2271	1877	11/2/15	11/2/15	Contig	University of Vienna	SAMN04038609	GCA_001421185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/185/GCA_001421185.1_ASM142118v1	-	-
Plantibacter sp. Leaf1	1735669	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.89457	69.7	-	LMJX01	6	3623	3535	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151572	GCA_001421315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/315/GCA_001421315.1_ASM142131v1	26633631	Leaf1
Agreia sp. Leaf210	1735682	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.54215	66.3	-	LMKK01	5	3409	3317	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151684	GCA_001421485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/485/GCA_001421485.1_Leaf210	26633631	Leaf210
Agromyces sp. Root81	1736601	PRJNA297942	297942	Terrabacteria group	Actinobacteria	4.15847	69.7	-	LMIR01	5	3970	3859	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155870	GCA_001429165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/165/GCA_001429165.1_Root81	26633631	Root81
Xylophilus sp. Leaf220	1735686	PRJNA297956	297956	Proteobacteria	Betaproteobacteria	4.48362	69.4	-	LMKO01	28	4012	3915	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151686	GCA_001421705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/705/GCA_001421705.1_Leaf220	26633631	Leaf220
Pseudorhodoferax sp. Leaf274	1736318	PRJNA297956	297956	Proteobacteria	Betaproteobacteria	6.73587	69.7	-	LMNA01	30	6181	6042	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151708	GCA_001422445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/445/GCA_001422445.1_Leaf274	26633631	Leaf274
Rathayibacter sp. Leaf296	1736327	PRJNA297956	297956	Terrabacteria group	Actinobacteria	4.02207	71.8	-	LMNR01	4	3729	3603	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151717	GCA_001423045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/045/GCA_001423045.1_Leaf296	26633631	Leaf296
Synechococcus sp. JA-3-3Ab	321327	PRJNA16251	16251	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.93277	60.2	chromosome:NC_007775.1/CP000239.1	-	1	2765	2611	2/6/06	4/17/17	Complete Genome	TIGR	SAMN02604048	GCA_000013205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/205/GCA_000013205.1_ASM1320v1	"1,639,109,018,059,490"	JA-3-3Ab
Ramlibacter sp. Leaf400	1736365	PRJNA297956	297956	Proteobacteria	Betaproteobacteria	4.58568	69.9	-	LMQL01	15	4416	4324	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151755	GCA_001424545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/545/GCA_001424545.1_Leaf400	26633631	Leaf400
Phenylobacterium sp. Root1290	1736445	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	4.26593	68	-	LMEE01	7	4149	4055	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155714	GCA_001425305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/305/GCA_001425305.1_Root1290	26633631	Root1290
Propionibacterium acnes HL096PA1	1134454	PRJNA81129	81129	Terrabacteria group	Actinobacteria	2.54977	60.1523	chromosome:NC_021085.1/CP003293.1; plasmid unnamed:NC_021086.1/CP003294.1	-	2	2593	2455	4/22/13	4/1/17	Complete Genome	UCLA David Geffen School of Medicine	SAMN02604074	GCA_000376705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/705/GCA_000376705.1_ASM37670v1	23337890	HL096PA1
Dyadobacter sp. Leaf189	1736295	PRJNA297956	297956	FCB group	Bacteroidetes/Chlorobi group	6.06507	47	-	LMPS01	11	5101	5014	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151675	GCA_001424405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/405/GCA_001424405.1_Leaf189	26633631	Leaf189
Geodermatophilus sp. Leaf369	1736354	PRJNA297956	297956	Terrabacteria group	Actinobacteria	4.36882	74	-	LMQA01	8	4259	4143	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151744	GCA_001424455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/455/GCA_001424455.1_Leaf369	26633631	Leaf369
Yonghaparkia sp. Root332	1736516	PRJNA297942	297942	Terrabacteria group	Actinobacteria	2.63234	71.7	-	LMCX01	2	2506	2425	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155785	GCA_001425665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/665/GCA_001425665.1_Root332	26633631	Root332
Phycicoccus sp. Root563	1736562	PRJNA297942	297942	Terrabacteria group	Actinobacteria	4.16395	71.3	-	LMGM01	3	3926	3796	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155831	GCA_001427915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/915/GCA_001427915.1_Root563	26633631	Root563
Angustibacter sp. Root456	1736539	PRJNA297942	297942	Terrabacteria group	Actinobacteria	3.83951	72.5	-	LMER01	20	3656	3535	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155808	GCA_001426435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/435/GCA_001426435.1_Root456	26633631	Root456
Pseudolabrys sp. Root1462	1736466	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	4.74104	64	-	LMFS01	4	4585	4476	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155735	GCA_001426945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/945/GCA_001426945.1_Root1462	26633631	Root1462
Cutibacterium acnes	1747	PRJNA291008	291008	Terrabacteria group	Actinobacteria	2.54796	60.1487	chromosome:NZ_CP012355.1/CP012355.1; plasmid unnamed:NZ_CP012356.1/CP012356.1	-	2	2587	2445	12/18/15	4/4/17	Complete Genome	Aarhus University	SAMN03982939	GCA_001469565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/565/GCA_001469565.1_ASM146956v1	26857276	PA_15_1_R1
Thermobacillus composti KWC4	717605	PRJNA54035	54035	Terrabacteria group	Firmicutes	4.35553	60.1445	chromosome:NC_019897.1/CP003255.1; plasmid pTHECO01:NC_019898.1/CP003256.1	-	2	4038	3829	12/18/12	5/19/17	Complete Genome	JGI	SAMN02261378	GCA_000227705.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/705/GCA_000227705.3_ASM22770v3	-	KWC4
Knoellia sp. Soil729	1736394	PRJNA298127	298127	Terrabacteria group	Actinobacteria	3.60574	69.9	-	LMSA01	8	3360	3244	11/2/15	4/11/17	Contig	ETH Zurich	SAMN04155659	GCA_001427985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/985/GCA_001427985.1_Soil729	26633631	Soil729
Tetrasphaera sp. Soil756	1736399	PRJNA298127	298127	Terrabacteria group	Actinobacteria	3.471	73.3	-	LMSE01	9	3268	3143	11/2/15	4/11/17	Scaffold	ETH Zurich	SAMN04155664	GCA_001428065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/065/GCA_001428065.1_Soil756	26633631	Soil756
Frateuria sp. Soil773	1736407	PRJNA298127	298127	Proteobacteria	Gammaproteobacteria	4.54816	68.9	-	LMSL01	41	3862	3715	11/2/15	4/11/17	Scaffold	ETH Zurich	SAMN04155672	GCA_001428405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/405/GCA_001428405.1_Soil773	26633631	Soil773
Noviherbaspirillum sp. Root189	1736487	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	6.14777	56.8	-	LMHZ01	90	5604	5388	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155756	GCA_001428545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/545/GCA_001428545.1_Root189	26633631	Root189
Oerskovia sp. Root918	1736607	PRJNA297942	297942	Terrabacteria group	Actinobacteria	4.48692	72.3	-	LMJG01	18	3934	3795	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155876	GCA_001428945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/945/GCA_001428945.1_Root918	26633631	Root918
Bifidobacterium longum DJO10A	205913	PRJNA18773	18773	Terrabacteria group	Actinobacteria	2.38953	60.1182	chromosome:NC_010816.1/CP000605.1; plasmid pDOJH10L:NC_004252.1/AF538868.1; plasmid pDOJH10S:NC_004253.1/AF538869.1	-	3	2105	1946	6/5/08	3/29/17	Complete Genome	Lactic Acid Bacteria Genome Consortium	SAMN02603512	GCA_000008945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/945/GCA_000008945.1_ASM894v1	"1,639,108,818,505,580"	DJO10A
Pseudoxanthomonas dokdonensis	344882	PRJNA284370	284370	Proteobacteria	Gammaproteobacteria	3.55366	64.5	-	LDJL01	34	3207	3099	11/4/15	4/16/17	Contig	CSIR-Institute of Microbial Technology	SAMN03701687	GCA_001431405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/405/GCA_001431405.1_ASM143140v1	-	DSM 21858
Stenotrophomonas humi	405444	PRJNA284364	284364	Proteobacteria	Gammaproteobacteria	4.12205	64	-	LDJI01	92	3690	3572	11/4/15	4/16/17	Contig	CSIR-Institute of Microbial Technology	SAMN03701675	GCA_001431415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/415/GCA_001431415.1_ASM143141v1	27014232	DSM 18929
Stenotrophomonas terrae	405446	PRJNA284366	284366	Proteobacteria	Gammaproteobacteria	4.41032	63.9	-	LDJJ01	143	3816	3690	11/4/15	4/16/17	Contig	CSIR-Institute of Microbial Technology	SAMN03701677	GCA_001431465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/465/GCA_001431465.1_ASM143146v1	27014232	DSM 18941
Stenotrophomonas ginsengisoli	336566	PRJNA284375	284375	Proteobacteria	Gammaproteobacteria	3.37411	65.9	-	LDJM01	99	3113	2961	11/4/15	4/16/17	Contig	CSIR-Institute of Microbial Technology	SAMN03701688	GCA_001431485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/485/GCA_001431485.1_ASM143148v1	27014232	DSM 24757
Stenotrophomonas daejeonensis	659018	PRJNA284378	284378	Proteobacteria	Gammaproteobacteria	3.28486	68.6	-	LDJP01	124	2974	2860	11/4/15	4/16/17	Contig	CSIR-Institute of Microbial Technology	SAMN03701730	GCA_001431505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/505/GCA_001431505.1_ASM143150v1	27014232	JCM 16244
Stenotrophomonas koreensis	266128	PRJNA284363	284363	Proteobacteria	Gammaproteobacteria	3.0299	66.1	-	LDJH01	58	2823	2685	11/4/15	4/16/17	Contig	CSIR-Institute of Microbial Technology	SAMN03701670	GCA_001431525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/525/GCA_001431525.1_ASM143152v1	27014232	DSM 17805
Stenotrophomonas chelatiphaga	517011	PRJNA284369	284369	Proteobacteria	Gammaproteobacteria	3.96773	66.8	-	LDJK01	148	3522	3397	11/4/15	4/16/17	Contig	CSIR-Institute of Microbial Technology	SAMN03701678	GCA_001431535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/535/GCA_001431535.1_ASM143153v1	27014232	DSM 21508
Stenotrophomonas pavanii	487698	PRJNA284376	284376	Proteobacteria	Gammaproteobacteria	4.3138	67.4	-	LDJN01	129	3971	3813	11/4/15	4/11/17	Contig	CSIR-Institute of Microbial Technology	SAMN03701690	GCA_001431565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/565/GCA_001431565.1_ASM143156v1	27014232	DSM 25135
Cylindrospermopsis sp. CR12	1747196	PRJNA300393	300393	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.72396	40.1	-	LMVE01	136	3348	3102	11/5/15	4/11/17	Scaffold	Singapore-MIT Alliance for Research and Technology	SAMN04221094	GCA_001432185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/185/GCA_001432185.1_ASM143218v1	26868404	CR12
Curvibacter sp. AEP1-3	1844971	PRJNA320637	320637	Proteobacteria	Betaproteobacteria	4.38389	58.8977	chromosome:NZ_CP015698.1/CP015698.1; plasmid unnamed:NZ_CP015699.1/CP015699.1	-	2	4111	4008	6/2/17	6/5/17	Chromosome	The Australian National University	SAMN04943348	GCA_002163715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/715/GCA_002163715.1_ASM216371v1	-	AEP1-3
Virgibacillus soli	480284	PRJNA286142	286142	Terrabacteria group	Firmicutes	5.00273	37.4	-	LGPD01	104	4614	4403	11/4/15	4/16/17	Scaffold	University of Guelph	SAMN03771354	GCA_001431195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/195/GCA_001431195.1_ASM143119v1	-	PL205
Salegentibacter mishustinae	270918	PRJNA297740	297740	FCB group	Bacteroidetes/Chlorobi group	3.77594	36.9	-	LKTP01	38	3391	3294	11/4/15	4/16/17	Contig	Xiamen University	SAMN04145418	GCA_001431365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/365/GCA_001431365.1_ASM143136v1	27081136	KCTC 12263
Bifidobacterium longum subsp. infantis 157F	565040	PRJDA32051	32051	Terrabacteria group	Actinobacteria	2.40883	60.111	chromosome:NC_015052.1/AP010890.1; plasmid p157F-NC1:NC_015053.1/AP010891.1; plasmid p157F-NC2:NC_015066.1/AP010892.1	-	3	2147	1994	1/29/11	3/30/17	Complete Genome	"University of Tokyo, Graduate School of Frontier Sciences"	SAMD00060953	GCA_000196575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/575/GCA_000196575.1_ASM19657v1	21270894	157F
Stenotrophomonas panacihumi	676599	PRJNA299448	299448	Proteobacteria	Gammaproteobacteria	3.92315	68.8	-	LLXU01	141	3566	3445	11/4/15	4/6/17	Contig	CSIR-Institute of Microbial Technology	SAMN04207867	GCA_001431645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/645/GCA_001431645.1_ASM143164v1	27014232	JCM 16536
Ferrovum sp. JA12	1356299	PRJNA295957	295957	Proteobacteria	Betaproteobacteria	1.99574	44.5	-	LJWX01	3	1993	1904	11/4/15	4/11/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04096804	GCA_001431705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/705/GCA_001431705.1_FMY	26808278	JA12
Bacillus gobiensis	1441095	PRJNA293641	293641	Terrabacteria group	Firmicutes	4.59771	40.4	chromosome:NZ_CP012600.1/CP012600.1	-	1	4690	4409	9/4/15	5/30/17	Chromosome	Fujian Academy of Agricultural Sciences	SAMN04009091	GCA_001278705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/705/GCA_001278705.1_ASM127870v1	-	FJAT-4402
Bifidobacterium longum NCC2705	206672	PRJNA328	328	Terrabacteria group	Actinobacteria	2.26027	60.1075	chromosome:NC_004307.2/AE014295.3; plasmid pBLO1:NC_004943.1/AF540971.1	-	2	1799	1728	9/27/02	8/3/16	Complete Genome	"Nestle Research Center, Switzerland"	SAMN02603675	GCA_000007525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/525/GCA_000007525.1_ASM752v1	12381787	NCC2705
Lactobacillus mindensis DSM 14500	1423770	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.33641	38.2	-	AZEZ01	103	2229	2101	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02369489	GCA_001434275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/275/GCA_001434275.1_ASM143427v1	26415554	DSM 14500
Lactobacillus diolivorans DSM 14421	1423739	PRJNA222257	222257	Terrabacteria group	Firmicutes	3.26138	40	-	AZEY01	109	3043	2908	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02369444	GCA_001434255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/255/GCA_001434255.1_ASM143425v1	26415554	DSM 14421
Lactobacillus kalixensis DSM 16043	1423763	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.07819	36.1	-	AZFM01	108	1971	1872	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02369405	GCA_001434335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/335/GCA_001434335.1_ASM143433v1	26415554	DSM 16043
Lactobacillus hammesii DSM 16381	1423753	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.81547	49.4	-	AZFS01	66	2595	2515	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02369488	GCA_001434395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/395/GCA_001434395.1_ASM143439v1	26415554	DSM 16381
Lactobacillus amylotrophicus DSM 20534	1423722	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.54857	43.6	-	AZCV01	21	1594	1493	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02369421	GCA_001434555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/555/GCA_001434555.1_ASM143455v1	26415554	DSM 20534
Lactobacillus bifermentans DSM 20003	1423726	PRJNA222257	222257	Terrabacteria group	Firmicutes	3.13399	44.3	-	AZDA01	147	3083	2962	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02369366	GCA_001434575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/575/GCA_001434575.1_ASM143457v1	26415554	DSM 20003
Lactobacillus tucceti DSM 20183	1423811	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.17386	34.1	-	AZDG01	51	2114	2034	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02369431	GCA_001434665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/665/GCA_001434665.1_ASM143466v1	26415554	DSM 20183
Lactobacillus algidus DSM 15638	1423719	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.59032	36	-	AZDI01	28	1567	1503	11/6/15	4/16/17	Contig	Shanghai Majorbio	SAMN02369425	GCA_001434695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/695/GCA_001434695.1_ASM143469v1	26415554	DSM 15638
Lactobacillus alimentarius DSM 20249	1423720	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.33632	35.4	-	AZDQ01	46	2246	2143	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02369426	GCA_001434745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/745/GCA_001434745.1_ASM143474v1	26415554	DSM 20249
Lactobacillus hordei DSM 19519	1423759	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.29801	34.8	-	AZDX01	137	2239	2131	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02369452	GCA_001434845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/845/GCA_001434845.1_ASM143484v1	26415554	DSM 19519
Lactobacillus acidifarinae DSM 19394	1423715	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.91832	51.6	-	AZDV01	30	2771	2686	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02369485	GCA_001434835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/835/GCA_001434835.1_ASM143483v1	26415554	DSM 19394
Lactobacillus capillatus DSM 19910	1423731	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.23292	37.6	-	AZEF01	61	2120	2050	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02369440	GCA_001434915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/915/GCA_001434915.1_ASM143491v1	26415554	DSM 19910
Lactobacillus uvarum DSM 19971	1423812	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.68641	36.9	-	AZEG01	164	2553	2416	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02369480	GCA_001434935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/935/GCA_001434935.1_ASM143493v1	26415554	DSM 19971
Lactobacillus ghanensis DSM 18630	1423750	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.60533	37.1	-	AZGB01	33	2467	2348	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02369449	GCA_001435235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/235/GCA_001435235.1_ASM143523v1	26415554	DSM 18630
Phaeobacter piscinae	1580596	PRJNA273578	273578	Proteobacteria	Alphaproteobacteria	4.12951	60.1034	chromosome:CP010681.1; plasmid pP14_a:CP010682.1; plasmid pP14_b:CP010683.1; plasmid pP14_c:CP010684.1; plasmid pP14_d:CP010685.1; plasmid pP14_e:CP010686.1; plasmid pP14_f:CP010687.1; plasmid pP14_g:CP010688.1	-	8	3923	3836	10/2/17	10/2/17	Complete Genome	Leibniz Institute DSMZ	SAMN03294467	GCA_002407245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/407/245/GCA_002407245.1_ASM240724v1	-	P14
Lactobacillus perolens DSM 12744	1423792	PRJNA222257	222257	Terrabacteria group	Firmicutes	3.30918	49.1	-	AZEC01	101	3136	3037	11/6/15	4/16/17	Contig	Shanghai Majorbio	SAMN02369469	GCA_001435585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/585/GCA_001435585.1_ASM143558v1	26415554	DSM 12744
Lactobacillus nantensis DSM 16982	1423774	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.91439	36.2	-	AZFV01	95	2769	2668	11/6/15	4/16/17	Contig	Shanghai Majorbio	SAMN02369491	GCA_001435815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/815/GCA_001435815.1_ASM143581v1	26415554	DSM 16982
Lactobacillus concavus DSM 17758	1423735	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.89811	43.3	-	AZFX01	96	1768	1671	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02369374	GCA_001435835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/835/GCA_001435835.1_ASM143583v1	26415554	DSM 17758
Lactobacillus frumenti DSM 13145	1423746	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.73358	42.6	-	AZER01	26	1715	1614	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02369487	GCA_001436045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/045/GCA_001436045.1_ASM143604v1	26415554	DSM 13145
Lactobacillus dextrinicus DSM 20335	1423738	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.80729	38.1	-	AYYK01	26	1757	1687	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02369443	GCA_001436095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/095/GCA_001436095.1_ASM143609v1	26415554	DSM 20335
Lactobacillus brantae DSM 23927	1423727	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.92984	47.5	-	AYZQ01	12	1898	1866	11/6/15	4/16/17	Contig	Shanghai Majorbio	SAMN02369393	GCA_001436115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/115/GCA_001436115.1_ASM143611v1	26415554	DSM 23927
Lactobacillus oeni DSM 19972	1423777	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.11763	37.3	-	AZEH01	43	2031	1910	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02369506	GCA_001436275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/275/GCA_001436275.1_ASM143627v1	26415554	DSM 19972
Lactobacillus vaccinostercus DSM 20634	1423813	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.5592	43.5	-	AYYY01	72	2461	2369	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02369385	GCA_001436295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/295/GCA_001436295.1_ASM143629v1	26415554	DSM 20634
Lactobacillus graminis DSM 20719	1423752	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.83415	40.3	-	AYZB01	72	1777	1698	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02369450	GCA_001436415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/415/GCA_001436415.1_ASM143641v1	26415554	DSM 20719
Lactobacillus taiwanensis DSM 21401	1423809	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.87339	34	-	AYZG01	52	1825	1633	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02369478	GCA_001436695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/695/GCA_001436695.1_ASM143669v1	26415554	DSM 21401
Lactobacillus pontis DSM 8475	1423794	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.66763	53.4	-	AZGO01	68	1668	1522	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02369494	GCA_001435345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/345/GCA_001435345.1_ASM143534v1	26415554	DSM 8475
Lactobacillus intestinalis DSM 6629	1423761	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.00979	35.4	-	AZGN01	55	1868	1739	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02369403	GCA_001435325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/325/GCA_001435325.1_ASM143532v1	26415554	DSM 6629
Lactobacillus aviarius subsp. aviarius DSM 20655	1423821	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.68053	40.1	-	AYZA01	24	1621	1540	11/6/15	4/4/17	Scaffold	Shanghai Majorbio	SAMN02369392	GCA_001436315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/315/GCA_001436315.1_ASM143631v1	26415554	DSM 20655
Lactobacillus nagelii DSM 13675	1122150	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.49852	36.7	-	AZEV01	44	2460	2322	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02369505	GCA_001434225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/225/GCA_001434225.1_ASM143422v1	26415554	DSM 13675
Lactobacillus parakefiri	152332	PRJNA375758	375758	Terrabacteria group	Firmicutes	2.59745	43.3	-	NCXI01	686	2367	2155	8/29/17	8/30/17	Contig	SysMilk	SAMN06718487	GCA_002276645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/645/GCA_002276645.1_ASM227664v1	-	OG2
Lactobacillus futsaii JCM 17355	1423818	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.51838	35.6	-	AZDO01	154	2472	2389	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02369448	GCA_001435505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/505/GCA_001435505.1_ASM143550v1	26415554	JCM 17355
Lactobacillus sunkii DSM 19904	1423808	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.69313	42.1	-	AZEA01	79	2592	2489	11/6/15	4/11/17	Contig	Shanghai Majorbio	SAMN02369477	GCA_001435575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/575/GCA_001435575.1_ASM143557v1	26415554	DSM 19904
Lactobacillus cacaonum DSM 21116	1423729	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.91911	33.9	-	AYZE01	17	1862	1779	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02369439	GCA_001436735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/735/GCA_001436735.1_ASM143673v1	26415554	DSM 21116
Lactobacillus aquaticus DSM 21051	1423725	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.40773	37.4	-	AYZD01	36	2252	2129	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02369378	GCA_001436755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/755/GCA_001436755.1_ASM143675v1	26415554	DSM 21051
Lactobacillus selangorensis	81857	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.08697	46.4	-	JQAZ01	32	2088	2003	11/6/15	4/11/17	Contig	Shanghai Majorbio	SAMN02797771	GCA_001437205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/205/GCA_001437205.1_ASM143720v1	26415554	DSM 13344
Lactobacillus homohiochii	33961	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.39135	38.8	-	JQBN01	21	1401	1308	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02797782	GCA_001436985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/985/GCA_001436985.1_ASM143698v1	26415554	DSM 20571
Lactobacillus secaliphilus	396268	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.64614	47.7	-	JQBW01	11	1551	1473	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02797776	GCA_001437055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/055/GCA_001437055.1_ASM143705v1	26415554	DSM 17896
Pediococcus stilesii	331679	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.83795	38.1	-	JQBX01	47	1840	1756	11/6/15	4/16/17	Contig	Shanghai Majorbio	SAMN02797812	GCA_001437075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/075/GCA_001437075.1_ASM143707v1	26415554	DSM 18001
Lactobacillus paucivorans	616990	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.3626	49.1	-	JQCA01	167	2265	2133	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02797785	GCA_001437125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/125/GCA_001437125.1_ASM143712v1	26415554	DSM 22467
Weissella viridescens	1629	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.53717	41.1	-	JQBM01	8	1531	1444	11/6/15	4/17/17	Scaffold	Shanghai Majorbio	SAMN02797781	GCA_001437355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/355/GCA_001437355.1_ASM143735v1	26415554	DSM 20410
SAR86 cluster bacterium BACL1 MAG-120507-bin14	1655567	PRJNA273799	273799	Proteobacteria	Gammaproteobacteria	1.48215	39.9	-	LIAR01	222	1583	1396	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741952	GCA_001437835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/835/GCA_001437835.1_ASM143783v1	-	-
Actinobacteria bacterium BACL2 MAG-120802-bin41	1655568	PRJNA273799	273799	Terrabacteria group	Actinobacteria	1.10106	44.4	-	LIAS01	311	1285	973	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741953	GCA_001437845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/845/GCA_001437845.1_ASM143784v1	-	-
Actinobacteria bacterium BACL4 MAG-120820-bin23	1655579	PRJNA273799	273799	Terrabacteria group	Actinobacteria	1.12784	41	-	LIBD01	252	1263	1043	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741964	GCA_001437855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/855/GCA_001437855.1_ASM143785v1	-	-
Actinobacteria bacterium BACL4 MAG-121001-bin59	1655581	PRJNA273799	273799	Terrabacteria group	Actinobacteria	1.12138	41.1	-	LIBF01	269	1267	1047	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741966	GCA_001437905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/905/GCA_001437905.1_ASM143790v1	-	-
Acidimicrobiia bacterium BACL6 MAG-120924-bin43	1655583	PRJNA273799	273799	Terrabacteria group	Actinobacteria	1.54262	51.6	-	LIBJ01	478	1815	1448	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741968	GCA_001437915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/915/GCA_001437915.1_ASM143791v1	-	-
Acidimicrobiia bacterium BACL6 MAG-121220-bin61	1655584	PRJNA273799	273799	Terrabacteria group	Actinobacteria	1.20514	51.2	-	LIBK01	559	1468	1070	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741969	GCA_001437935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/935/GCA_001437935.1_ASM143793v1	-	-
Cryomorphaceae bacterium BACL11 MAG-121001-bin54	1655587	PRJNA273799	273799	FCB group	Bacteroidetes/Chlorobi group	1.20823	33.1	-	LIBL01	514	1193	895	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741972	GCA_001437955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/955/GCA_001437955.1_ASM143795v1	-	-
Cryomorphaceae bacterium BACL11 MAG-121128-bin16	1655589	PRJNA273799	273799	FCB group	Bacteroidetes/Chlorobi group	1.15904	32.7	-	LIBN01	485	1195	901	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741974	GCA_001437985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/985/GCA_001437985.1_ASM143798v1	-	-
Verrucomicrobia subdivision 6 bacterium BACL9 MAG-120507-bin52	1655590	PRJNA273799	273799	PVC group	Verrucomicrobia	1.60178	56	-	LIBO01	458	1771	1422	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741975	GCA_001438005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/005/GCA_001438005.1_ASM143800v1	-	-
Cryomorphaceae bacterium BACL18 MAG-120924-bin36	1655591	PRJNA273799	273799	FCB group	Bacteroidetes/Chlorobi group	1.45972	58.3	-	LIBP01	455	1528	1181	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741976	GCA_001438015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/015/GCA_001438015.1_ASM143801v1	-	-
Pelagibacteraceae bacterium BACL5 MAG-121128-bin54	1655607	PRJNA273799	273799	Proteobacteria	Alphaproteobacteria	1.05552	29.8	-	LIBX01	272	1232	1022	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741998	GCA_001438055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/055/GCA_001438055.1_ASM143805v1	-	-
SAR86 cluster bacterium BACL1 MAG-120619-bin26	1655611	PRJNA273799	273799	Proteobacteria	Gammaproteobacteria	1.53914	39.9	-	LICB01	347	1676	1410	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03742002	GCA_001438095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/095/GCA_001438095.1_ASM143809v1	-	-
SAR92 bacterium BACL26 MAG-121220-bin70	1655626	PRJNA273799	273799	Proteobacteria	Gammaproteobacteria	1.90742	46	-	LICA01	743	2009	1544	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03742017	GCA_001438085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/085/GCA_001438085.1_ASM143808v1	-	-
Cryomorphaceae bacterium BACL21 MAG-121220-bin10	1655592	PRJNA273799	273799	FCB group	Bacteroidetes/Chlorobi group	1.91595	44.1	-	LICC01	109	1780	1662	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741977	GCA_001438125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/125/GCA_001438125.1_ASM143812v1	-	-
OM182 bacterium BACL3 MAG-120619-bin3	1655593	PRJNA273799	273799	Proteobacteria	Gammaproteobacteria	2.6489	52.8	-	LICD01	474	2492	2146	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741978	GCA_001438145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/145/GCA_001438145.1_ASM143814v1	-	-
Cryomorphaceae bacterium BACL23 MAG-120924-bin60	1655594	PRJNA273799	273799	FCB group	Bacteroidetes/Chlorobi group	1.72749	54.6	-	LICE01	324	1675	1413	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741979	GCA_001438165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/165/GCA_001438165.1_ASM143816v1	-	-
Cryomorphaceae bacterium BACL7 MAG-121220-bin83	1655595	PRJNA273799	273799	FCB group	Bacteroidetes/Chlorobi group	1.72393	49	-	LICF01	60	1556	1481	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741980	GCA_001438175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/175/GCA_001438175.1_ASM143817v1	-	-
Cryomorphaceae bacterium BACL7 MAG-120322-bin74	1655596	PRJNA273799	273799	FCB group	Bacteroidetes/Chlorobi group	1.74336	49	-	LICG01	77	1589	1495	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741981	GCA_001438205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/205/GCA_001438205.1_ASM143820v1	-	-
Rhodobacter sp. BACL10 MAG-120910-bin24	1655597	PRJNA273799	273799	Proteobacteria	Alphaproteobacteria	2.76362	50.5	-	LICH01	671	2872	2422	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741982	GCA_001438235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/235/GCA_001438235.1_ASM143823v1	-	-
Sphingobacteriales bacterium BACL12 MAG-120813-bin55	1655600	PRJNA273799	273799	FCB group	Bacteroidetes/Chlorobi group	2.79962	47.3	-	LICN01	721	2675	2133	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741988	GCA_001438265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/265/GCA_001438265.1_ASM143826v1	-	-
Actinobacteria bacterium BACL2 MAG-120920-bin34	1655602	PRJNA273799	273799	Terrabacteria group	Actinobacteria	1.13972	44.2	-	LIBS01	462	1335	1004	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741993	GCA_001438315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/315/GCA_001438315.1_ASM143831v1	-	-
Pelagibacteraceae bacterium BACL5 MAG-120820-bin39	1655605	PRJNA273799	273799	Proteobacteria	Alphaproteobacteria	1.15185	29.3	-	LIBV01	228	1354	1135	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741996	GCA_001438335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/335/GCA_001438335.1_ASM143833v1	-	-
Pelagibacteraceae bacterium BACL5 MAG-121015-bin10	1655606	PRJNA273799	273799	Proteobacteria	Alphaproteobacteria	1.27617	29.4	-	LIBW01	323	1515	1234	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741997	GCA_001438345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/345/GCA_001438345.1_ASM143834v1	-	-
Methylophilales bacterium BACL14 MAG-120910-bin43	1655608	PRJNA273799	273799	Proteobacteria	Betaproteobacteria	1.08621	38.6	-	LIBY01	336	1237	1026	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741999	GCA_001438385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/385/GCA_001438385.1_ASM143838v1	-	-
Actinobacteria bacterium BACL4 MAG-120920-bin74	1655609	PRJNA273799	273799	Terrabacteria group	Actinobacteria	1.081	40.9	-	LIBZ01	259	1244	1017	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03742000	GCA_001438395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/395/GCA_001438395.1_ASM143839v1	-	-
SAR86 cluster bacterium BACL1 MAG-120813-bin36	1655616	PRJNA273799	273799	Proteobacteria	Gammaproteobacteria	1.26427	40.1	-	LICR01	263	1398	1220	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03742007	GCA_001438425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/425/GCA_001438425.1_ASM143842v1	-	-
cyanobacterium BACL30 MAG-120619-bin27	1655601	PRJNA273799	273799	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.81381	63.6	-	LICO01	570	2141	1670	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741989	GCA_001438415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/415/GCA_001438415.1_ASM143841v1	-	-
SAR86 cluster bacterium BACL1 MAG-120823-bin87	1655617	PRJNA273799	273799	Proteobacteria	Gammaproteobacteria	1.45197	40	-	LICU01	256	1584	1380	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03742008	GCA_001438465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/465/GCA_001438465.1_ASM143846v1	-	-
SAR86 cluster bacterium BACL1 MAG-120828-bin5	1655613	PRJNA273799	273799	Proteobacteria	Gammaproteobacteria	1.02994	40.1	-	LICV01	130	1148	1018	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03742004	GCA_001438485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/485/GCA_001438485.1_ASM143848v1	-	-
SAR86 cluster bacterium BACL1 MAG-121022-bin58	1655622	PRJNA273799	273799	Proteobacteria	Gammaproteobacteria	1.49509	40	-	LIDA01	252	1615	1411	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03742013	GCA_001438495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/495/GCA_001438495.1_ASM143849v1	-	-
Pelagibacteraceae bacterium BACL20 MAG-120920-bin64	1655618	PRJNA273799	273799	Proteobacteria	Alphaproteobacteria	1.14384	30.9	-	LICT01	510	1359	1010	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03742009	GCA_001438505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/505/GCA_001438505.1_ASM143850v1	-	-
SAR86 cluster bacterium BACL1 MAG-120924-bin88	1655619	PRJNA273799	273799	Proteobacteria	Gammaproteobacteria	1.3141	40.2	-	LICW01	268	1445	1235	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03742010	GCA_001438545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/545/GCA_001438545.1_ASM143854v1	-	-
SAR86 cluster bacterium BACL1 MAG-121105-bin34	1655623	PRJNA273799	273799	Proteobacteria	Gammaproteobacteria	1.30651	40.3	-	LIDB01	311	1449	1226	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03742014	GCA_001438565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/565/GCA_001438565.1_ASM143856v1	-	-
SAR86 cluster bacterium BACL1 MAG-121128-bin56	1655615	PRJNA273799	273799	Proteobacteria	Gammaproteobacteria	1.46935	40	-	LIDC01	242	1585	1402	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03742006	GCA_001438585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/585/GCA_001438585.1_ASM143858v1	-	-
SAR92 bacterium BACL16 MAG-120619-bin48	1655625	PRJNA273799	273799	Proteobacteria	Gammaproteobacteria	2.52748	51.1	-	LIDE01	111	2393	2253	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03742016	GCA_001438605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/605/GCA_001438605.1_ASM143860v1	-	-
Cryomorphaceae bacterium BACL18 MAG-120507-bin74	1655627	PRJNA273799	273799	FCB group	Bacteroidetes/Chlorobi group	1.18107	56.7	-	LIDF01	500	1291	921	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03742018	GCA_001438615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/615/GCA_001438615.1_ASM143861v1	-	-
Methylophilales bacterium BACL14 MAG-120920-bin58	1655631	PRJNA273799	273799	Proteobacteria	Betaproteobacteria	1.2802	38.7	-	LIDI01	268	1377	1202	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03742022	GCA_001438645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/645/GCA_001438645.1_ASM143864v1	-	-
Pediococcus cellicola	319652	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.0384	39	-	JQBR01	22	1991	1918	11/6/15	4/16/17	Contig	Shanghai Majorbio	SAMN02797811	GCA_001438655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/655/GCA_001438655.1_ASM143865v1	26415554	DSM 17757
Weissella kandleri	1616	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.33444	39.7	-	JQBP01	21	1297	1226	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02797804	GCA_001438705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/705/GCA_001438705.1_ASM143870v1	26415554	DSM 20593
Pediococcus inopinatus	114090	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.1141	38.6	-	JQBC01	157	2084	1949	11/6/15	4/11/17	Contig	Shanghai Majorbio	SAMN02797814	GCA_001438725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/725/GCA_001438725.1_ASM143872v1	26415554	DSM 20285
Weissella minor	1620	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.7685	39.3	-	JQCD01	31	1812	1713	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02797798	GCA_001437425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/425/GCA_001437425.1_ASM143742v1	26415554	DSM 20014
Lactobacillus siliginis	348151	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.07045	44.1	-	JQCB01	52	2023	1942	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02797786	GCA_001437435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/435/GCA_001437435.1_ASM143743v1	26415554	DSM 22696
Pediococcus argentinicus	480391	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.76496	36.7	-	JQCQ01	93	1804	1725	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02797819	GCA_001437605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/605/GCA_001437605.1_ASM143760v1	26415554	DSM 23026
Actinobacteria bacterium BACL15 MAG-120823-bin78	1655563	PRJNA273799	273799	Terrabacteria group	Actinobacteria	1.00109	47	-	LIAN01	374	1171	891	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741948	GCA_001437635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/635/GCA_001437635.1_ASM143763v1	-	-
Actinobacteria bacterium BACL2 MAG-120820-bin50	1655570	PRJNA273799	273799	Terrabacteria group	Actinobacteria	1.09105	44.3	-	LIAU01	457	1281	954	11/6/15	8/18/16	Contig	Kungliga Tekniska Hogskolan	SAMN03741955	GCA_001437665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/665/GCA_001437665.1_ASM143766v1	26667648	-
SAR86 cluster bacterium BACL1 MAG-120920-bin57	1655571	PRJNA273799	273799	Proteobacteria	Gammaproteobacteria	1.45027	39.9	-	LIAV01	511	1629	1260	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741956	GCA_001437675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/675/GCA_001437675.1_ASM143767v1	-	-
Actinobacteria bacterium BACL2 MAG-121001-bin67	1655572	PRJNA273799	273799	Terrabacteria group	Actinobacteria	1.04396	44.3	-	LIAW01	433	1209	887	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741957	GCA_001437695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/695/GCA_001437695.1_ASM143769v1	-	-
Microbacteriaceae bacterium BACL28 MAG-120531-bin53	1655576	PRJNA273799	273799	Terrabacteria group	Actinobacteria	1.12159	51.7	-	LIBA01	307	1296	1019	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741961	GCA_001437715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/715/GCA_001437715.1_ASM143771v1	-	-
Actinobacteria bacterium BACL4 MAG-121022-bin9	1655582	PRJNA273799	273799	Terrabacteria group	Actinobacteria	0.924837	40.8	-	LIBG01	274	1054	841	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741967	GCA_001437755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/755/GCA_001437755.1_ASM143775v1	-	-
OM182 bacterium BACL3 MAG-120920-bin41	1655580	PRJNA273799	273799	Proteobacteria	Gammaproteobacteria	2.19179	53.1	-	LIBE01	776	2229	1722	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741965	GCA_001437745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/745/GCA_001437745.1_ASM143774v1	-	-
Acidimicrobiia bacterium BACL6 MAG-120322-bin79	1655585	PRJNA273799	273799	Terrabacteria group	Actinobacteria	1.75361	51.3	-	LIBH01	346	1948	1672	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741970	GCA_001437765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/765/GCA_001437765.1_ASM143776v1	-	-
Acidimicrobiia bacterium BACL6 MAG-120910-bin40	1655586	PRJNA273799	273799	Terrabacteria group	Actinobacteria	1.68832	51.3	-	LIBI01	269	1885	1620	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741971	GCA_001437785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/785/GCA_001437785.1_ASM143778v1	-	-
Acidimicrobium sp. BACL27 MAG-120823-bin4	1655564	PRJNA273799	273799	Terrabacteria group	Actinobacteria	1.67206	50.4	-	LIAO01	658	1914	1417	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741949	GCA_001437825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/825/GCA_001437825.1_ASM143782v1	-	-
Lactobacillus kimchiensis	993692	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.69872	35.5	-	JQCF01	71	2572	2512	11/6/15	4/16/17	Contig	Shanghai Majorbio	SAMN02797788	GCA_001438805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/805/GCA_001438805.1_ASM143880v1	26415554	DSM 24716
Lactobacillus xiangfangensis	942150	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.98958	45.1	-	JQCL01	103	2794	2682	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02797795	GCA_001438845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/845/GCA_001438845.1_ASM143884v1	26415554	LMG 26013
Actinobacteria bacterium BACL15 MAG-120619-bin91	1655562	PRJNA273799	273799	Terrabacteria group	Actinobacteria	1.21442	47.2	-	LIAM01	243	1370	1128	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741947	GCA_001438925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/925/GCA_001438925.1_ASM143892v1	-	-
Microbacteriaceae bacterium BACL25 MAG-120322-bin65	1655574	PRJNA273799	273799	Terrabacteria group	Actinobacteria	1.26282	55.7	-	LIAY01	160	1343	1174	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741959	GCA_001438965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/965/GCA_001438965.1_ASM143896v1	-	-
Actinobacteria bacterium BACL2 MAG-120813-bin23	1655569	PRJNA273799	273799	Terrabacteria group	Actinobacteria	1.15663	44.3	-	LIAT01	383	1375	1027	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741954	GCA_001439025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/025/GCA_001439025.1_ASM143902v1	-	-
Actinobacteria bacterium BACL2 MAG-121220-bin52	1655573	PRJNA273799	273799	Terrabacteria group	Actinobacteria	0.97901	44.4	-	LIAX01	322	1162	874	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741958	GCA_001439035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/035/GCA_001439035.1_ASM143903v1	-	-
OM182 bacterium BACL3 MAG-120507-bin80	1655577	PRJNA273799	273799	Proteobacteria	Gammaproteobacteria	2.33846	52.8	-	LIBB01	787	2397	1860	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741962	GCA_001439055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/055/GCA_001439055.1_ASM143905v1	-	-
Actinobacteria bacterium BACL4 MAG-120813-bin39	1655578	PRJNA273799	273799	Terrabacteria group	Actinobacteria	0.594391	40.9	-	LIBC01	307	711	499	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741963	GCA_001439085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/085/GCA_001439085.1_ASM143908v1	-	-
Cryomorphaceae bacterium BACL11 MAG-121015-bin20	1655588	PRJNA273799	273799	FCB group	Bacteroidetes/Chlorobi group	1.20933	32.8	-	LIBM01	475	1199	915	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741973	GCA_001439105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/105/GCA_001439105.1_ASM143910v1	-	-
Sphingobacteriales bacterium BACL12 MAG-120802-bin5	1655599	PRJNA273799	273799	FCB group	Bacteroidetes/Chlorobi group	2.47327	47.1	-	LICM01	951	2408	1786	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741987	GCA_001439115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/115/GCA_001439115.1_ASM143911v1	-	-
Pelagibacteraceae bacterium BACL5 MAG-120705-bin12	1655603	PRJNA273799	273799	Proteobacteria	Alphaproteobacteria	1.05606	31.6	-	LIBT01	155	1189	1035	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741994	GCA_001439165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/165/GCA_001439165.1_ASM143916v1	-	-
Pelagibacteraceae bacterium BACL5 MAG-120813-bin20	1655604	PRJNA273799	273799	Proteobacteria	Alphaproteobacteria	0.851154	30.5	-	LIBU01	302	1006	782	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741995	GCA_001439185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/185/GCA_001439185.1_ASM143918v1	-	-
Cryomorphaceae bacterium BACL29 MAG-121220-bin8	1655598	PRJNA273799	273799	FCB group	Bacteroidetes/Chlorobi group	1.48052	30	-	LICI01	518	1534	1270	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741983	GCA_001439205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/205/GCA_001439205.1_ASM143920v1	-	-
Actinobacteria bacterium BACL4 MAG-120507-bin0	1655610	PRJNA273799	273799	Terrabacteria group	Actinobacteria	1.21943	41.2	-	LICQ01	354	1378	1106	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03742001	GCA_001439225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/225/GCA_001439225.1_ASM143922v1	-	-
SAR86 cluster bacterium BACL1 MAG-120820-bin45	1655612	PRJNA273799	273799	Proteobacteria	Gammaproteobacteria	1.45554	39.9	-	LICS01	213	1565	1364	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03742003	GCA_001439265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/265/GCA_001439265.1_ASM143926v1	-	-
SAR86 cluster bacterium BACL1 MAG-121004-bin11	1655614	PRJNA273799	273799	Proteobacteria	Gammaproteobacteria	1.03092	40.3	-	LICY01	132	1103	990	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03742005	GCA_001439285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/285/GCA_001439285.1_ASM143928v1	-	-
SAR92 bacterium BACL16 MAG-120322-bin99	1655624	PRJNA273799	273799	Proteobacteria	Gammaproteobacteria	1.99768	51.6	-	LIDD01	675	2080	1683	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03742015	GCA_001439295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/295/GCA_001439295.1_ASM143929v1	-	-
Cryomorphaceae bacterium BACL22 MAG-120619-bin32	1655630	PRJNA273799	273799	FCB group	Bacteroidetes/Chlorobi group	2.40899	32.1	-	LIDG01	520	2227	1905	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03742021	GCA_001439315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/315/GCA_001439315.1_ASM143931v1	-	-
OM182 bacterium BACL3 MAG-120531-bin86	1655628	PRJNA273799	273799	Proteobacteria	Gammaproteobacteria	2.24476	53	-	LIDH01	749	2255	1775	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03742019	GCA_001439345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/345/GCA_001439345.1_ASM143934v1	-	-
Actinobacteria bacterium BACL2 MAG-120507-bin38	1655633	PRJNA273799	273799	Terrabacteria group	Actinobacteria	0.994061	44.3	-	LIDL01	450	1171	844	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03742024	GCA_001439355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/355/GCA_001439355.1_ASM143935v1	-	-
Verrucomicrobia subdivision 6 bacterium BACL9 MAG-120924-bin69	1655635	PRJNA273799	273799	PVC group	Verrucomicrobia	1.48503	56.4	-	LIDN01	474	1634	1295	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03742026	GCA_001439385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/385/GCA_001439385.1_ASM143938v1	-	-
SAR86 cluster bacterium BACL1 MAG-121001-bin56	1655620	PRJNA273799	273799	Proteobacteria	Gammaproteobacteria	1.50905	40	-	LICX01	360	1653	1364	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03742011	GCA_001439395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/395/GCA_001439395.1_ASM143939v1	-	-
Verrucomicrobia subdivision 6 bacterium BACL9 MAG-120820-bin42	1655634	PRJNA273799	273799	PVC group	Verrucomicrobia	1.4068	56	-	LIDM01	476	1617	1261	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03742025	GCA_001439425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/425/GCA_001439425.1_ASM143942v1	-	-
OM182 bacterium BACL3 MAG-120924-bin41	1655632	PRJNA273799	273799	Proteobacteria	Gammaproteobacteria	2.3088	53.5	-	LIDJ01	641	2219	1865	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03742023	GCA_001439435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/435/GCA_001439435.1_ASM143943v1	-	-
SAR86 cluster bacterium BACL1 MAG-121015-bin70	1655621	PRJNA273799	273799	Proteobacteria	Gammaproteobacteria	1.49509	40	-	LICZ01	252	1615	1411	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03742012	GCA_001439525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/525/GCA_001439525.1_ASM143952v1	-	-
Opitutaceae bacterium BACL24 MAG-120322-bin51	1655636	PRJNA273799	273799	PVC group	Verrucomicrobia	2.98025	53.1	-	LIDO01	567	2692	2388	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03742027	GCA_001439535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/535/GCA_001439535.1_ASM143953v1	-	-
OM182 bacterium BACL3 MAG-121001-bin29	1655629	PRJNA273799	273799	Proteobacteria	Gammaproteobacteria	1.65566	52.8	-	LIDK01	833	1740	1248	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03742020	GCA_001439505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/505/GCA_001439505.1_ASM143950v1	-	-
Serratia ficaria	61651	PRJEB6403	251923	Proteobacteria	Gammaproteobacteria	5.20997	60.1	chromosome 1:NZ_LT906479.1/LT906479.1	-	1	4874	4673	8/15/17	8/28/17	Complete Genome	SC	SAMEA4384070	GCA_900187015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/015/GCA_900187015.1_50465_F01	-	NCTC12148
Caloramator mitchellensis	908809	PRJNA284824	284824	Terrabacteria group	Firmicutes	2.41936	33.2	-	LKHP01	53	2441	2336	11/6/15	4/16/17	Contig	Microbial Gene Research and Resources Facility	SAMN03733418	GCA_001440545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/545/GCA_001440545.1_ASM144054v1	26847908	VF08
Pseudomonas sp. S-6-2	1931241	PRJNA359732	359732	Proteobacteria	Gammaproteobacteria	4.03515	60.1	chromosome:NZ_CP020100.1/CP020100.1	-	1	3736	3648	3/21/17	3/23/17	Complete Genome	Center for Bioengineering and Biotechnology	SAMN06197296	GCA_002056295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/295/GCA_002056295.1_ASM205629v1	-	S-6-2
Bacillus cecembensis	459347	PRJNA299438	299438	Terrabacteria group	Firmicutes	4.78297	36.9	-	LMBZ01	227	4679	4464	11/6/15	4/16/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04202599	GCA_001439635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/635/GCA_001439635.1_ASM143963v1	26847893	DSM 21993
Formosa algae	225843	PRJNA299442	299442	FCB group	Bacteroidetes/Chlorobi group	4.29246	33.4	-	LMAK01	82	3671	3548	11/6/15	4/16/17	Contig	G.B. Elyakov Pacific Institute of Bioorganic Chemistry	SAMN04202632	GCA_001439665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/665/GCA_001439665.1_ASM143966v1	-	KMM 3553
Pseudomonas orientalis	76758	PRJEB16399	349297	Proteobacteria	Gammaproteobacteria	6.13023	60.4	chromosome I:NZ_LT629782.1/LT629782.1	-	1	5573	5309	10/21/16	4/17/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04490197	GCA_900105795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/795/GCA_900105795.1_IMG-taxon_2636416190_annotated_assembly	-	BS2775
Pediococcus ethanolidurans	319653	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.26091	37.2	-	JQBY01	66	2176	2079	11/6/15	4/11/17	Contig	Shanghai Majorbio	SAMN02797818	GCA_001437405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/405/GCA_001437405.1_ASM143740v1	26415554	DSM 22301
Bacillus humi	263474	PRJNA299434	299434	Terrabacteria group	Firmicutes	4.83644	38.2	-	LMBW01	126	4738	4530	11/6/15	4/16/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04202596	GCA_001439915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/915/GCA_001439915.1_ASM143991v1	26847898	DSM 16318
Chromatiaceae bacterium 2141T.STBD.0c.01a	1978339	PRJNA376164	376164	Proteobacteria	Gammaproteobacteria	4.79045	60.1	chromosome:NZ_CP019936.1/CP019936.1	-	1	4536	4414	3/2/17	4/17/17	Complete Genome	"Marine Science Center, Northeastern University"	SAMN06351224	GCA_002009425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/425/GCA_002009425.1_ASM200942v1	-	2141T.STBD.0c.01a
Bacillus farraginis	254757	PRJNA299439	299439	Terrabacteria group	Firmicutes	5.30878	34.7	-	LMCA01	125	5212	5039	11/6/15	4/16/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04202600	GCA_001439965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/965/GCA_001439965.1_ASM143996v1	27313303	DSM 16013
Bradyrhizobium manausense	989370	PRJNA295814	295814	Proteobacteria	Alphaproteobacteria	9.14531	62.9	-	LJYG01	127	8630	7836	11/6/15	4/16/17	Scaffold	Embrapa Agrobiologia	SAMN04088902	GCA_001440035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/035/GCA_001440035.1_ABySSBR3351v1	-	BR3351
Bradyrhizobium jicamae	280332	PRJNA241374	241374	Proteobacteria	Alphaproteobacteria	8.73885	62.4	-	LLXZ01	235	8447	7848	11/6/15	4/16/17	Scaffold	UPM	SAMN02689491	GCA_001440395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/395/GCA_001440395.1_ASM144039v1	-	PAC68
Bradyrhizobium valentinum	1518501	PRJNA241154	241154	Proteobacteria	Alphaproteobacteria	8.84526	61.9	-	LLXX01	242	8566	7796	11/6/15	4/11/17	Scaffold	UPM	SAMN02688507	GCA_001440405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/405/GCA_001440405.1_ASM144040v1	-	LmjM3
Bradyrhizobium retamae	1300035	PRJNA241375	241375	Proteobacteria	Alphaproteobacteria	8.46622	61.9	-	LLYA01	235	8174	7527	11/6/15	4/11/17	Contig	UPM	SAMN02689496	GCA_001440415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/415/GCA_001440415.1_ASM144041v1	-	Ro19
Bradyrhizobium lablabi	722472	PRJNA241376	241376	Proteobacteria	Alphaproteobacteria	8.81729	62.6	-	LLYB01	135	8443	7857	11/6/15	4/11/17	Scaffold	UPM	SAMN02689497	GCA_001440475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/475/GCA_001440475.1_ASM144047v1	-	CCBAU 23086
Altererythrobacter troitsensis	292222	PRJNA299739	299739	Proteobacteria	Alphaproteobacteria	2.90227	64.7	-	LMAU01	9	2882	2796	11/9/15	4/16/17	Contig	"Second Institute of Oceanography, State Oceanic Administration"	SAMN04214891	GCA_001441535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/535/GCA_001441535.1_ASM144153v1	26769941	JCM 17037
Roseovarius indicus	540747	PRJNA280936	280936	Proteobacteria	Alphaproteobacteria	6.06363	64.4	-	LAXI01	122	5902	5725	11/9/15	4/11/17	Contig	Third Institute of Oceanography	SAMN03481072	GCA_001441635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/635/GCA_001441635.1_ASM144163v1	-	B108
Alishewanella sp. WH16-1	1651088	PRJNA283029	283029	Proteobacteria	Gammaproteobacteria	3.48887	50.4	-	LCWL01	149	3292	3134	11/9/15	4/11/17	Contig	Huazhong Agricultural University	SAMN03614207	GCA_001441695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/695/GCA_001441695.1_ASM144169v1	-	WH16-1
Pedobacter ginsenosidimutans	687842	PRJNA301366	301366	FCB group	Bacteroidetes/Chlorobi group	6.51755	38.7	-	LMZQ01	86	5448	5283	11/12/15	4/16/17	Contig	GCAT-SEEK	SAMN04244546	GCA_001442625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/625/GCA_001442625.1_ASM144262v1	-	KACC 14530
Cutibacterium acnes	1747	PRJNA292484	292484	Terrabacteria group	Actinobacteria	2.54001	60.1	chromosome:NZ_CP012352.1/CP012352.1	-	1	2559	2420	12/18/15	4/4/17	Complete Genome	None	SAMN03982940	GCA_001469615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/615/GCA_001469615.1_ASM146961v1	26857276	PA_15_2_L1
Candidatus Kryptobacter tengchongensis	1643429	PRJEB11786	302417	FCB group	Candidatus Kryptonia	1.60454	36.6	-	FAOR01	175	1626	1388	11/17/15	4/4/17	Contig	DOE - Joint Genome Institute	SAMN03436304	GCA_001485645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/645/GCA_001485645.1_JGI_assembly	-	-
Bifidobacterium longum subsp. longum	1679	PRJNA287223	287223	Terrabacteria group	Actinobacteria	2.34099	60.1	chromosome:NZ_CP011964.1/CP011964.1	-	1	2037	1855	11/19/15	4/4/17	Complete Genome	University College Cork	SAMN03785818	GCA_001446255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/255/GCA_001446255.1_ASM144625v1	26489930	NCIMB8809
Devriesea agamarum	472569	PRJEB9356	289994	Terrabacteria group	Actinobacteria	2.95888	60.1	chromosome I:NZ_LN849456.1/LN849456.1	-	1	2507	2409	7/14/15	4/17/17	Complete Genome	"Ghent University, Faculty of Veterinary Medicine"	SAMEA3388572	GCA_900070355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/070/355/GCA_900070355.1_S2_rcS3_S1_rcS3	-	IMP2
Lysobacter enzymogenes	69	PRJNA298404	298404	Proteobacteria	Gammaproteobacteria	6.15738	69.9	chromosome:NZ_CP013140.1/CP013140.1	-	1	4974	4800	11/12/15	4/11/17	Chromosome	"Rutgers, The State University of New Jersey"	SAMN04158597	GCA_001442515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/515/GCA_001442515.1_ASM144251v1	-	C3
Corynebacterium singulare	161899	PRJNA246651	246651	Terrabacteria group	Actinobacteria	2.83052	60.1	chromosome:NZ_CP010827.1/CP010827.1	-	1	2623	2493	2/6/15	4/17/17	Complete Genome	Bielefeld University	SAMN03177398	GCA_000833575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/575/GCA_000833575.1_ASM83357v1	25814602	IBS B52218
Candidatus Thermokryptus mobilis	1643428	PRJNA279023	279023	FCB group	Candidatus Kryptonia	2.42329	38.6	-	LDXU01	35	-	-	11/12/15	11/12/15	Scaffold	DOE Joint Genome Institute	SAMN03436303	GCA_001442855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/855/GCA_001442855.1_ASM144285v1	-	-
Armatimonadetes bacterium GBS	1661580	PRJEB11785	302416	Terrabacteria group	Armatimonadetes	2.68057	60.6	-	FAOQ01	120	2508	2352	11/17/15	4/11/17	Scaffold	DOE - Joint Genome Institute	SAMN03742521	GCA_001536225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/225/GCA_001536225.1_JGI_assembly	-	-
bacterium GBS-1	1662110	PRJNA285323	285323	unclassified Bacteria	unclassified Bacteria (miscellaneous)	1.81543	44.6	-	LEKQ01	16	-	-	11/12/15	11/12/15	Contig	Joint Genome Institute	SAMN03743949	GCA_001443005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/443/005/GCA_001443005.1_ASM144300v1	-	-
Parcubacteria bacterium GBS-2	1662109	PRJNA285325	285325	unclassified Bacteria	Bacteria candidate phyla	0.659	32.9	-	LEKP01	7	-	-	11/12/15	11/12/15	Scaffold	Joint Genome Institute	SAMN03743976	GCA_001443025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/443/025/GCA_001443025.1_ASM144302v1	-	-
Streptococcus orisasini	1080071	PRJDB4302	300516	Terrabacteria group	Firmicutes	2.29916	40	-	BCLE01	67	2181	2090	10/28/15	4/11/17	Contig	Kyushu University	SAMD00042493	GCA_001431045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/045/GCA_001431045.1_ASM143104v1	26769944	SH06
Roseovarius atlanticus	1641875	PRJNA280930	280930	Proteobacteria	Alphaproteobacteria	4.57835	63.6	-	LAXJ01	73	4495	4346	11/9/15	4/11/17	Contig	Third Institute of Oceanography	SAMN03480902	GCA_001441615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/615/GCA_001441615.1_ASM144161v1	-	R12B
Thaumarchaeota archaeon CSP1-1	1640512	PRJNA262935	262935	TACK group	Thaumarchaeota	1.35843	34.4	-	LDXL01	10	1688	1652	11/13/15	11/17/15	Scaffold	DOE Joint Genome Institute	SAMN03462092	GCA_001443365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/443/365/GCA_001443365.1_ASM144336v1	-	-
Chloroflexi bacterium CSP1-4	1640513	PRJNA262935	262935	Terrabacteria group	Chloroflexi	2.58547	71.8	-	LDXM01	65	2501	2464	11/13/15	11/17/15	Scaffold	DOE Joint Genome Institute	SAMN03462093	GCA_001443375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/443/375/GCA_001443375.1_ASM144337v1	-	-
candidate division WWE3 bacterium CSP1-7	1576480	PRJNA262935	262935	unclassified Bacteria	Bacteria candidate phyla	0.572141	53.6	-	LDXK01	7	668	622	11/13/15	11/17/15	Contig	DOE Joint Genome Institute	SAMN03462091	GCA_001443395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/443/395/GCA_001443395.1_ASM144339v1	-	-
Candidatus Rokubacteria bacterium CSP1-6	1640509	PRJNA262935	262935	unclassified Bacteria	Bacteria candidate phyla	2.87679	68.4	-	LDXP01	158	3100	3061	11/13/15	11/17/15	Scaffold	DOE Joint Genome Institute	SAMN03462096	GCA_001443385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/443/385/GCA_001443385.1_ASM144338v1	-	-
Candidatus Dadabacteria bacterium CSP1-2	1640508	PRJNA262935	262935	unclassified Bacteria	Bacteria candidate phyla	2.47966	40.3	-	LDXN01	89	2467	2424	11/13/15	11/17/15	Scaffold	DOE Joint Genome Institute	SAMN03462094	GCA_001443445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/443/445/GCA_001443445.1_ASM144344v1	-	-
Deltaproteobacteria bacterium CSP1-8	1640514	PRJNA262935	262935	Proteobacteria	delta/epsilon subdivisions	2.17727	63.5	-	LDXO01	46	2172	2130	11/13/15	11/17/15	Scaffold	DOE Joint Genome Institute	SAMN03462095	GCA_001443455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/443/455/GCA_001443455.1_ASM144345v1	-	-
Armatimonadetes bacterium CSP1-3	1640515	PRJNA262935	262935	Terrabacteria group	Armatimonadetes	2.53567	68.3	-	LDXQ01	154	2645	2607	11/13/15	11/17/15	Scaffold	DOE Joint Genome Institute	SAMN03462097	GCA_001443485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/443/485/GCA_001443485.1_ASM144348v1	-	-
candidate division NC10 bacterium CSP1-5	1640516	PRJNA262935	262935	unclassified Bacteria	Bacteria candidate phyla	2.7675	62.4	-	LDXR01	40	2884	2837	11/13/15	11/17/15	Scaffold	DOE Joint Genome Institute	SAMN03462098	GCA_001443495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/443/495/GCA_001443495.1_ASM144349v1	-	-
Desulfobacteraceae bacterium RAAP-1	1735114	PRJNA297506	297506	Proteobacteria	delta/epsilon subdivisions	4.09157	49.9	-	LKPX01	193	-	-	11/13/15	3/22/16	Contig	Colorado School of Mines	SAMN04103539	GCA_001443525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/443/525/GCA_001443525.1_ASM144352v1	26769931	-
Acidimicrobiaceae bacterium RAAP-2	1736654	PRJNA297506	297506	Terrabacteria group	Actinobacteria	2.24069	65.5	-	LMAD01	59	-	-	11/13/15	3/17/16	Contig	Colorado School of Mines	SAMN04155646	GCA_001443545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/443/545/GCA_001443545.1_ASM144354v1	26769942	-
Acidimicrobiaceae bacterium RAAP-3	1737893	PRJNA297506	297506	Terrabacteria group	Actinobacteria	3.04698	47.5	-	LMAE01	150	-	-	11/13/15	3/17/16	Contig	Colorado School of Mines	SAMN04166963	GCA_001443565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/443/565/GCA_001443565.1_ASM144356v1	26769942	-
Bifidobacterium longum	216816	PRJDB3123	266877	Terrabacteria group	Actinobacteria	2.29014	60.1	chromosome:NZ_AP014658.1/AP014658.1	-	1	1950	1823	11/11/14	4/3/17	Complete Genome	Tokyo University of Agriculture	SAMD00019943	GCA_000829295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/295/GCA_000829295.1_ASM82929v1	25523770	105-A
endosymbiont of Ridgeia piscesae	54398	PRJNA283904	283904	Proteobacteria	Gammaproteobacteria	3.5108	58.4	-	LMXI01	249	3520	2768	11/13/15	5/19/17	Scaffold	University of Victoria	SAMN04209398	GCA_001443675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/443/675/GCA_001443675.1_ASM144367v1	-	-
Pelistega indica	1414851	PRJNA227792	227792	Proteobacteria	Betaproteobacteria	2.50491	38.9	-	AYSV01	147	2538	2113	12/11/13	4/9/17	Contig	National Centre for Cell Science	SAMN02402847	GCA_000506865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/865/GCA_000506865.1_HM07	-	HM-7
Streptomyces mangrovisoli	1428628	PRJNA279916	279916	Terrabacteria group	Actinobacteria	9.16582	72.5	-	LAVA02	199	7987	7619	4/21/15	3/14/17	Contig	University of Malaya	SAMN03451686	GCA_000974985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/985/GCA_000974985.2_ASM97498v2	-	MUSC 149
Pseudomonas fluorescens	294	PRJNA254192	254192	Proteobacteria	Gammaproteobacteria	6.06446	60.1	chromosome:NZ_CP008896.1/CP008896.1	-	1	5548	5321	7/17/14	4/2/17	Complete Genome	Aalborg University	SAMN02900729	GCA_000730425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/425/GCA_000730425.1_ASM73042v1	25212622	UK4
Synechococcus sp. WH 8109	166314	PRJNA37911	37911	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.11151	60.1	chromosome:NZ_CP006882.1/CP006882.1	-	1	2340	2232	1/9/14	4/17/17	Complete Genome	Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436260	GCA_000161795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/795/GCA_000161795.2_ASM16179v2	-	WH 8109
Psychrobacter piscatorii	554343	PRJNA302210	302210	Proteobacteria	Gammaproteobacteria	3.08931	44	-	LNDJ01	139	2664	2541	11/17/15	4/16/17	Contig	"Third Institute of Oceanography, State Oceanic Administration"	SAMN04270327	GCA_001444505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/505/GCA_001444505.1_ASM144450v1	26941137	LQ58
Armatimonadetes bacterium GXS	1661582	PRJEB11787	302418	Terrabacteria group	Armatimonadetes	2.91866	60.6	-	FAOT01	46	2669	2546	11/19/15	4/17/17	Scaffold	DOE - Joint Genome Institute	SAMN03743788	GCA_001536265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/265/GCA_001536265.1_IMG-taxon_2616645015_annotated_assembly	-	-
Armatimonadetes bacterium DC	1661583	PRJEB11788	302419	Terrabacteria group	Armatimonadetes	2.85221	60.5	-	FAOU01	26	2603	2513	11/19/15	4/11/17	Scaffold	DOE - Joint Genome Institute	SAMN03743790	GCA_001536245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/245/GCA_001536245.1_IMG-taxon_2616645014_annotated_assembly	-	-
Bacillus cihuensis	1208599	PRJNA226627	226627	Terrabacteria group	Firmicutes	5.44302	37.1	-	AYSD01	28	5097	4822	12/5/13	4/17/17	Scaffold	Fujian academy of agricultural sciences	SAMN02469794	GCA_000504145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/145/GCA_000504145.1_SOAPdenovo_for_version2.04_of_Bacillus_sp._FJAT-14515_genome	24459256	FJAT-14515
Bifidobacterium thermophilum RBL67	1254439	PRJNA179141	179141	Terrabacteria group	Actinobacteria	2.29164	60.1	chromosome:NC_020546.1/CP004346.1	-	1	1746	1641	3/20/13	4/8/17	Complete Genome	ETH Zurich	SAMN02603226	GCA_000347695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/695/GCA_000347695.1_ASM34769v1	23640377	RBL67
Halolamina sediminis	1480675	PRJEB9600	292950	Euryarchaeota	Halobacteria	2.83586	67.9	-	CVUA01	1	2880	2756	8/15/15	3/22/17	Contig	JEJU NATIONAL UNIVERSITY	SAMEA3451356	GCA_001282785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/785/GCA_001282785.1_halo7	-	halo7
Aquabacterium parvum	70584	PRJNA284825	284825	Proteobacteria	Betaproteobacteria	4.593	65.3	-	LFRI01	619	4019	3847	11/20/15	4/16/17	Contig	Harbin Institute of Technology	SAMN03733419	GCA_001447195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/447/195/GCA_001447195.1_ASM144719v1	26823591	B6
Streptomyces hokutonensis	1306990	PRJDB1072	198447	Terrabacteria group	Actinobacteria	11.8284	70.3	-	BARG01	178	10800	10356	4/10/13	5/19/17	Contig	National Institute of Technology and Evaluation	SAMD00041833	GCA_000376565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/565/GCA_000376565.1_ASM37656v1	-	R1-NS-10
Alicyclobacillus tengchongensis	368812	PRJNA271324	271324	Terrabacteria group	Firmicutes	2.80944	54	-	JXBW01	55	2784	2632	11/23/15	4/16/17	Contig	Yunnan normal university	SAMN03274329	GCA_001447355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/447/355/GCA_001447355.1_ASM144735v1	-	CGMCC1504
Domibacillus tundrae	1587527	PRJNA278101	278101	Terrabacteria group	Firmicutes	3.39205	43.5	-	LAJA01	48	3569	3369	4/8/15	4/10/17	Contig	Korea Polar Research Institute	SAMN03406598	GCA_000970675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/675/GCA_000970675.1_ASM97067v1	-	PAMC 80007
Clostridium polynesiense	1325933	PRJEB1957	204993	Terrabacteria group	Firmicutes	3.56074	34	-	CCXI01	161	3524	3213	9/18/14	4/10/17	Contig	URMITE	SAMEA2769924	GCA_000820705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/705/GCA_000820705.1_Clostridium_polynesiense_str._MS1	-	MS1
Terracidiphilus gabretensis	1577687	PRJNA277964	277964	Acidobacteria	Acidobacteriia	5.3457	57.3	-	LAIJ01	19	4413	4315	11/30/15	4/11/17	Scaffold	Institute of Microbiology of the AS CR	SAMN03400178	GCA_001449115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/115/GCA_001449115.1_ASM144911v1	-	S55
Pseudomonas sp. UW4	1207075	PRJNA170097	170097	Proteobacteria	Gammaproteobacteria	6.18339	60.1	chromosome:NC_019670.1/CP003880.1	-	1	5659	5447	12/3/12	5/24/17	Complete Genome	University of Waterloo	SAMN02604261	GCA_000316175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/175/GCA_000316175.1_ASM31617v1	23516524	UW4
Cryomorphaceae bacterium BACL7 MAG-120910-bin2	1655558	PRJNA273799	273799	FCB group	Bacteroidetes/Chlorobi group	1.74695	49	-	LIBQ01	132	1623	1488	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741991	GCA_001438305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/305/GCA_001438305.1_ASM143830v1	-	-
Ahrensia marina	1514904	PRJNA272716	272716	Proteobacteria	Alphaproteobacteria	3.44103	50.1	-	JXMU01	65	3415	3333	9/18/15	4/11/17	Contig	Ocean University of China	SAMN03285044	GCA_001293565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/565/GCA_001293565.1_ASM129356v1	-	LZD062
Veillonella seminalis ACS-216-V-Col6b	883156	PRJNA52119	52119	Terrabacteria group	Firmicutes	2.32413	41.9	-	AHAF01	4	2148	2040	11/27/12	4/8/17	Scaffold	Broad Institute	SAMN02463888	GCA_000315505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/505/GCA_000315505.1_Veil_ratt_ACS-216-V-COL6B_V1	-	ACS-216-V-Col6b
Bifidobacterium asteroides PRL2011	1147128	PRJNA83029	83029	Terrabacteria group	Actinobacteria	2.1673	60.1	chromosome:NC_018720.1/CP003325.1	-	1	1730	1648	10/9/12	4/8/17	Complete Genome	University College Cork	SAMN02604114	GCA_000304215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/215/GCA_000304215.1_ASM30421v1	23028506	PRL2011
Propionibacterium acnes C1	1234380	PRJNA175596	175596	Terrabacteria group	Actinobacteria	2.519	60.1	chromosome:NC_018707.1/CP003877.1	-	1	2568	2411	10/3/12	3/30/17	Complete Genome	Tokyo Medical and Dental University	SAMN02604070	GCA_000302515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/515/GCA_000302515.1_ASM30251v1	23405284	C1
Paenibacillus etheri	1306852	PRJNA276406	276406	Terrabacteria group	Firmicutes	6.6345	43.5	-	LCZJ02	108	5983	5656	5/22/15	4/11/17	Scaffold	"Water Research Institute, University of Granada"	SAMN03372544	GCA_001012825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/825/GCA_001012825.2_ASM101282v2	-	SH7
Vibrio bivalvicida	1276888	PRJNA297724	297724	Proteobacteria	Gammaproteobacteria	4.92205	44.3	-	LLEI02	91	4541	4387	10/19/15	4/12/17	Scaffold	University of Santiago de Compostela	SAMN04145357	GCA_001399455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/455/GCA_001399455.2_ASM139945v2	26654527	605
Leptospira mayottensis 200901122	1193010	PRJNA167247	167247	Spirochaetes	Spirochaetia	4.16155	39.4	-	AKWM02	85	4043	3615	10/17/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436388	GCA_000306335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/335/GCA_000306335.2_gls454125v02	25249563	200901122
Dehalococcoidia bacterium SCGC AB-540-C11	1759436	PRJNA303082	303082	Terrabacteria group	Chloroflexi	0.942394	47.9	-	LNTV01	155	-	-	12/3/15	12/3/15	Contig	University of Vienna	SAMN04285587	GCA_001455825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/825/GCA_001455825.1_ASM145582v1	-	-
Propionibacterium acnes TypeIA2 P.acn17	1114967	PRJNA76701	76701	Terrabacteria group	Actinobacteria	2.52289	60.1	chromosome:NC_016512.1/CP003196.1	-	1	2544	2411	12/23/11	4/10/17	Complete Genome	BAYGEN	SAMN02602999	GCA_000240035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/035/GCA_000240035.1_ASM24003v1	22374954	P.acn17
Acetivibrio ethanolgignens	290052	PRJNA300828	300828	Terrabacteria group	Firmicutes	3.66025	41	-	LNAM01	229	3690	3421	12/4/15	4/16/17	Scaffold	BGI-shenzhen	SAMN04229414	GCA_001461035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/461/035/GCA_001461035.1_ASM146103v1	-	ACET-33324
Propionibacterium acnes SK137	553199	PRJNA31005	31005	Terrabacteria group	Actinobacteria	2.49533	60.1	chromosome:NC_014039.1/CP001977.1	-	1	2525	2390	3/23/10	3/30/17	Complete Genome	J. Craig Venter Institute	SAMN00000718	GCA_000025765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/765/GCA_000025765.1_ASM2576v1	-	SK137
Sinomonas humi	1338436	PRJNA261101	261101	Terrabacteria group	Actinobacteria	4.41608	67.2	-	JTDL01	156	4103	3891	12/16/14	4/9/17	Contig	University of Malaya	SAMN03070057	GCA_000802235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/235/GCA_000802235.1_ASM80223v1	-	MUSC 117
Kiloniella litopenaei	1549748	PRJNA279543	279543	Proteobacteria	Alphaproteobacteria	4.31212	46.1	-	LANI01	85	4040	3955	4/30/15	4/10/17	Contig	The Third Institute of State Oceanic Administration	SAMN03449748	GCA_000982415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/415/GCA_000982415.1_ASM98241v1	26386704	P1-1
Rhodopirellula islandica	595434	PRJNA253007	253007	PVC group	Planctomycetes	7.4332	57.2	-	LECT01	55	5777	5458	6/15/15	7/19/17	Contig	Max Planck Institute for Marine Microbiology	SAMN02866107	GCA_001027925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/925/GCA_001027925.1_K833	-	K833
Ruegeria sp. TM1040	292414	PRJNA13040	13040	Proteobacteria	Alphaproteobacteria	4.1537	60.054	chromosome:NC_008044.1/CP000377.1; plasmid mega plasmid:NC_008043.1/CP000376.1; plasmid unnamed:NC_008042.1/CP000375.1	-	3	3951	3839	5/22/06	8/28/17	Complete Genome	DOE Joint Genome Institute	SAMN02598292	GCA_000014065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/065/GCA_000014065.1_ASM1406v1	17526795	TM1040
Fibrobacteria bacterium GUT307	1704281	PRJNA293241	293241	FCB group	Fibrobacteres	2.62495	41.5	-	LIUI01	157	-	-	12/8/15	12/8/15	Scaffold	The University of Queensland	SAMN03998885	GCA_001462235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/235/GCA_001462235.1_ASM146223v1	-	-
Fibrobacteria bacterium GUT77	1704282	PRJNA293241	293241	FCB group	Fibrobacteres	2.38616	52.2	-	LIUJ01	317	-	-	12/8/15	12/8/15	Scaffold	The University of Queensland	SAMN03999395	GCA_001462255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/255/GCA_001462255.1_ASM146225v1	-	-
Fibrobacteria bacterium GUT31	1704280	PRJNA293241	293241	FCB group	Fibrobacteres	3.2338	43.2	-	LIUH01	220	-	-	12/8/15	12/8/15	Scaffold	The University of Queensland	SAMN03998884	GCA_001462225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/225/GCA_001462225.1_ASM146222v1	-	-
Candidatus Fibromonas termitidis	1704279	PRJNA293241	293241	FCB group	Fibrobacteres	3.1627	43.1	-	LIUG01	211	-	-	12/8/15	12/8/15	Scaffold	The University of Queensland	SAMN03998883	GCA_001462245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/245/GCA_001462245.1_ASM146224v1	-	-
Fibrobacteria bacterium AD111	1705391	PRJNA293241	293241	FCB group	Fibrobacteres	3.60217	50.2	-	LIUL01	189	-	-	12/8/15	12/8/15	Scaffold	The University of Queensland	SAMN03998887	GCA_001462315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/315/GCA_001462315.1_ASM146231v1	-	-
Fibrobacteria bacterium AD80	1705390	PRJNA293241	293241	FCB group	Fibrobacteres	3.25564	51.4	-	LIUK01	123	-	-	12/8/15	12/8/15	Scaffold	The University of Queensland	SAMN03998886	GCA_001462305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/305/GCA_001462305.1_ASM146230v1	-	-
Fibrobacteria bacterium AD312	1705392	PRJNA293241	293241	FCB group	Fibrobacteres	2.82948	37.4	-	LIUM01	50	-	-	12/8/15	12/8/15	Scaffold	The University of Queensland	SAMN03998888	GCA_001462345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/345/GCA_001462345.1_ASM146234v1	-	-
Pyrodictium occultum	2309	PRJNA239661	239661	TACK group	Crenarchaeota	1.62173	63.5	-	LNTB01	2	1700	1617	12/8/15	4/16/17	Contig	Oak Ridge National Laboratory	SAMN03154506	GCA_001462395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/395/GCA_001462395.1_ASM146239v1	26950321	PL-19
Nitrincola nitratireducens	1229521	PRJNA179027	179027	Proteobacteria	Gammaproteobacteria	4.02765	46.8	-	AONB01	68	3800	3305	3/4/14	7/24/17	Contig	Institute of Microbial Technology	SAMN02951920	GCA_000585235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/235/GCA_000585235.1_NitAk23	26481633	AK23
Aureimonas frigidaquae	424757	PRJDB3816	300645	Proteobacteria	Alphaproteobacteria	4.09823	66.1	-	BBWR01	30	3858	3774	11/7/15	4/16/17	Contig	"Graduate School of Life Sciences, Tohoku University"	SAMD00028696	GCA_001463905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/905/GCA_001463905.1_ASM146390v1	26534993	JCM 14755
Bradyrhizobiaceae bacterium Ga0074131	1752203	PRJNA301005	301005	Proteobacteria	Alphaproteobacteria	4.98252	63.7	-	LNEC01	23	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254496	GCA_001464035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/035/GCA_001464035.1_Bradyrhizobiaceae_bacterium_Ga0074131	-	-
Burkholderiales bacterium Ga0077543	1752205	PRJNA301005	301005	Proteobacteria	Betaproteobacteria	5.18653	68.3	-	LNET01	130	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254513	GCA_001464055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/055/GCA_001464055.1_Burkholderiales_bacterium_Ga0077543	-	-
Nitrosomonadales bacterium Ga0074132	1752216	PRJNA301005	301005	Proteobacteria	Betaproteobacteria	3.21144	45.2	-	LNEF01	618	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254499	GCA_001464045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/045/GCA_001464045.1_Nitrosomonadales_bacterium_Ga0074132	-	-
Acidobacteria bacterium Ga0077522	1752183	PRJNA301005	301005	Acidobacteria	unclassified Acidobacteria	5.44409	70	-	LNDN01	429	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254481	GCA_001464065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/065/GCA_001464065.1_Acidobacteria_bacterium_Ga0077522	-	-
Betaproteobacteria bacterium Ga0077540	1752202	PRJNA301005	301005	Proteobacteria	Betaproteobacteria	2.33024	45.2	-	LNEP01	15	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254509	GCA_001464125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/125/GCA_001464125.1_Betaproteobacteria_bacterium_Ga0077540	-	-
Chlamydiae bacterium Ga0074140	1752208	PRJNA301005	301005	PVC group	Chlamydiae	1.7242	47.8	-	LNES01	6	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254512	GCA_001464115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/115/GCA_001464115.1_Chlamydiae_bacterium_Ga0074140	-	-
bacterium Ga0077546	1752193	PRJNA301005	301005	unclassified Bacteria	unclassified Bacteria (miscellaneous)	6.59916	47.8	-	LNEX01	594	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254517	GCA_001464165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/165/GCA_001464165.1_bacterium_Ga0077546	-	-
Cytophagales bacterium Ga0077538	1752209	PRJNA301005	301005	FCB group	Bacteroidetes/Chlorobi group	3.96481	42.8	-	LNEN01	323	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254507	GCA_001464155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/155/GCA_001464155.1_Cytophagales_bacterium_Ga0077538	-	-
Burkholderiales bacterium Ga0077547	1752207	PRJNA301005	301005	Proteobacteria	Betaproteobacteria	2.84326	65.2	-	LNEY01	33	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254518	GCA_001464195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/195/GCA_001464195.1_Burkholderiales_bacterium_Ga0077547	-	-
Rhizobiales bacterium Ga0077548	1752226	PRJNA301005	301005	Proteobacteria	Alphaproteobacteria	2.61796	60.1	-	LNEZ01	109	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254519	GCA_001464215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/215/GCA_001464215.1_Rhizobiales_bacterium_Ga0077548	-	-
Rhizobiales bacterium Ga0077556	1752229	PRJNA301005	301005	Proteobacteria	Alphaproteobacteria	4.41683	69.8	-	LNFH01	483	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254527	GCA_001464235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/235/GCA_001464235.1_Rhizobiales_bacterium_Ga0077556	-	-
Actinomycetales bacterium Ga0077552	1752191	PRJNA301005	301005	Terrabacteria group	Actinobacteria	2.291	71.3	-	LNFD01	413	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254523	GCA_001464255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/255/GCA_001464255.1_Actinomycetales_bacterium_Ga0077552	-	-
Actinobacteria bacterium Ga0077560	1752190	PRJNA301005	301005	Terrabacteria group	Actinobacteria	3.79766	73.6	-	LNFL01	193	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254531	GCA_001464275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/275/GCA_001464275.1_Actinobacteria_bacterium_Ga0077560	-	-
Sphingomonadales bacterium Ga0077559	1752233	PRJNA301005	301005	Proteobacteria	Alphaproteobacteria	2.86347	56.5	-	LNFK01	78	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254530	GCA_001464315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/315/GCA_001464315.1_Sphingomonadales_bacterium_Ga0077559	-	-
Rhizobiales bacterium Ga0077549	1752227	PRJNA301005	301005	Proteobacteria	Alphaproteobacteria	5.38635	60.3	-	LNFA01	288	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254520	GCA_001464285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/285/GCA_001464285.1_Rhizobiales_bacterium_Ga0077549	-	-
Rhizobiales bacterium Ga0077545	1752225	PRJNA301005	301005	Proteobacteria	Alphaproteobacteria	3.37531	63	-	LNEV01	19	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254515	GCA_001464335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/335/GCA_001464335.1_Rhizobiales_bacterium_Ga0077545	-	-
Burkholderiales bacterium Ga0077544	1752206	PRJNA301005	301005	Proteobacteria	Betaproteobacteria	3.24815	51.8	-	LNEU01	34	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254514	GCA_001464355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/355/GCA_001464355.1_Burkholderiales_bacterium_Ga0077544	-	-
Rhodospirillales bacterium Ga0074136	1752230	PRJNA301005	301005	Proteobacteria	Alphaproteobacteria	4.77185	71	-	LNEW01	229	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254516	GCA_001464375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/375/GCA_001464375.1_Rhodospirillales_bacterium_Ga0074136	-	-
Deltaproteobacteria bacterium Ga0077550	1752211	PRJNA301005	301005	Proteobacteria	delta/epsilon subdivisions	10.2426	72.2	-	LNFB01	400	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254521	GCA_001464385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/385/GCA_001464385.1_Deltaproteobacteria_bacterium_Ga0077550	-	-
Rhizobiales bacterium Ga0074135	1752220	PRJNA301005	301005	Proteobacteria	Alphaproteobacteria	5.03117	67.9	-	LNER01	844	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254511	GCA_001464405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/405/GCA_001464405.1_Rhizobiales_bacterium_Ga0074135	-	-
Alphaproteobacteria bacterium Ga0077535	1752192	PRJNA301005	301005	Proteobacteria	Alphaproteobacteria	3.95666	62.8	-	LNEK01	44	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254504	GCA_001464425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/425/GCA_001464425.1_Alphaproteobacteria_bacterium_Ga0077535	-	-
Acidobacteria bacterium Ga0077534	1752184	PRJNA301005	301005	Acidobacteria	unclassified Acidobacteria	4.20047	53.1	-	LNEI01	32	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254502	GCA_001464455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/455/GCA_001464455.1_Acidobacteria_bacterium_Ga0077534	-	-
Flavobacteriaceae bacterium Ga0077528	1752212	PRJNA301005	301005	FCB group	Bacteroidetes/Chlorobi group	3.45002	31.5	-	LNDX01	52	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254491	GCA_001464475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/475/GCA_001464475.1_Flavobacteriaceae_bacterium_Ga0077528	-	-
Betaproteobacteria bacterium Ga0074130	1752197	PRJNA301005	301005	Proteobacteria	Betaproteobacteria	2.22124	56.6	-	LNDZ01	38	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254493	GCA_001464495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/495/GCA_001464495.1_Betaproteobacteria_bacterium_Ga0074130	-	-
Verrucomicrobia bacterium Ga0077533	1752234	PRJNA301005	301005	PVC group	Verrucomicrobia	2.92508	64.3	-	LNEH01	226	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254501	GCA_001464505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/505/GCA_001464505.1_Verrucomicrobia_bacterium_Ga0077533	-	-
Planctomycetaceae bacterium Ga0077529	1752218	PRJNA301005	301005	PVC group	Planctomycetes	5.08352	60.5	-	LNDY01	555	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254492	GCA_001464525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/525/GCA_001464525.1_Planctomycetaceae_bacterium_Ga0077529	-	-
Acidobacteria bacterium Ga0077551	1752185	PRJNA301005	301005	Acidobacteria	unclassified Acidobacteria	3.08058	64.4	-	LNFC01	25	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254522	GCA_001464545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/545/GCA_001464545.1_Acidobacteria_bacterium_Ga0077551	-	-
Acidobacteria bacterium Ga0077553	1752186	PRJNA301005	301005	Acidobacteria	unclassified Acidobacteria	6.45451	62.7	-	LNFE01	308	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254524	GCA_001464575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/575/GCA_001464575.1_Acidobacteria_bacterium_Ga0077553	-	-
Gammaproteobacteria bacterium Ga0077554	1752215	PRJNA301005	301005	Proteobacteria	Gammaproteobacteria	2.91204	53	-	LNFF01	44	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254525	GCA_001464585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/585/GCA_001464585.1_Gammaproteobacteria_bacterium_Ga0077554	-	-
Sphingomonadales bacterium Ga0077557	1752232	PRJNA301005	301005	Proteobacteria	Alphaproteobacteria	3.57234	61.9	-	LNFI01	41	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254528	GCA_001464615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/615/GCA_001464615.1_Sphingomonadales_bacterium_Ga0077557	-	-
Bacteroidia bacterium Ga0077558	1752194	PRJNA301005	301005	FCB group	Bacteroidetes/Chlorobi group	4.07838	38.1	-	LNFJ01	196	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254529	GCA_001464625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/625/GCA_001464625.1_Bacteroidia_bacterium_Ga0077558	-	-
Rhizobiales bacterium Ga0077555	1752228	PRJNA301005	301005	Proteobacteria	Alphaproteobacteria	5.3939	63.2	-	LNFG01	162	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254526	GCA_001464655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/655/GCA_001464655.1_Rhizobiales_bacterium_Ga0077555	-	-
Acidobacteria bacterium Ga0074141	1752182	PRJNA301005	301005	Acidobacteria	unclassified Acidobacteria	3.96415	55.1	-	LNDP01	30	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254483	GCA_001464665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/665/GCA_001464665.1_Acidobacteria_bacterium_Ga0074141	-	-
Betaproteobacteria bacterium Ga0077523	1752198	PRJNA301005	301005	Proteobacteria	Betaproteobacteria	4.69553	65.9	-	LNDQ01	156	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254484	GCA_001464695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/695/GCA_001464695.1_Betaproteobacteria_bacterium_Ga0077523	-	-
Bdellovibrionales bacterium Ga0074137	1752195	PRJNA301005	301005	Proteobacteria	Oligoflexia	3.38787	51.1	-	LNDT01	41	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254487	GCA_001464715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/715/GCA_001464715.1_Bdellovibrionales_bacterium_Ga0074137	-	-
Nitrospira sp. Ga0074138	1752217	PRJNA301005	301005	Nitrospirae	Nitrospira	4.11153	55.1	-	LNDU01	66	-	-	12/9/15	2/26/16	Contig	University of Glasgow	SAMN04254488	GCA_001464735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/735/GCA_001464735.1_Nitrospirae_bacterium_Ga0074138	27303675	-
Rhizobiales bacterium Ga0077524	1752221	PRJNA301005	301005	Proteobacteria	Alphaproteobacteria	5.11671	64.4	-	LNDR01	415	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254485	GCA_001464755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/755/GCA_001464755.1_Rhizobiales_bacterium_Ga0077524	-	-
Betaproteobacteria bacterium Ga0077526	1752199	PRJNA301005	301005	Proteobacteria	Betaproteobacteria	6.10159	66.1	-	LNDV01	52	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254489	GCA_001464765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/765/GCA_001464765.1_Betaproteobacteria_bacterium_Ga0077526	-	-
Bdellovibrionales bacterium Ga0074139	1752196	PRJNA301005	301005	Proteobacteria	Oligoflexia	2.89727	39.9	-	LNEB01	15	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254495	GCA_001464795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/795/GCA_001464795.1_Bdellovibrionales_bacterium_Ga0074139	-	-
Betaproteobacteria bacterium Ga0077527	1752200	PRJNA301005	301005	Proteobacteria	Betaproteobacteria	3.41825	63	-	LNDW01	26	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254490	GCA_001464815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/815/GCA_001464815.1_Betaproteobacteria_bacterium_Ga0077527	-	-
Rhizobiales bacterium Ga0077525	1752222	PRJNA301005	301005	Proteobacteria	Alphaproteobacteria	3.51657	63.3	-	LNDS01	56	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254486	GCA_001464835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/835/GCA_001464835.1_Rhizobiales_bacterium_Ga0077525	-	-
Rhizobiales bacterium Ga0077530	1752223	PRJNA301005	301005	Proteobacteria	Alphaproteobacteria	4.46301	63.4	-	LNEA01	747	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254494	GCA_001464855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/855/GCA_001464855.1_Rhizobiales_bacterium_Ga0077530	-	-
Burkholderiales bacterium Ga0074133	1752204	PRJNA301005	301005	Proteobacteria	Betaproteobacteria	4.34279	65.2	-	LNEG01	255	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254500	GCA_001464865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/865/GCA_001464865.1_Burkholderiales_bacterium_Ga0074133	-	-
Betaproteobacteria bacterium Ga0077532	1752201	PRJNA301005	301005	Proteobacteria	Betaproteobacteria	4.9256	67	-	LNEE01	62	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254498	GCA_001464895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/895/GCA_001464895.1_Betaproteobacteria_bacterium_Ga0077532	-	-
Sphingomonadales bacterium Ga0077531	1752231	PRJNA301005	301005	Proteobacteria	Alphaproteobacteria	2.83875	62.9	-	LNED01	48	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254497	GCA_001464915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/915/GCA_001464915.1_Sphingomonadales_bacterium_Ga0077531	-	-
Gammaproteobacteria bacterium Ga0077536	1752214	PRJNA301005	301005	Proteobacteria	Gammaproteobacteria	4.82664	66.8	-	LNEL01	65	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254505	GCA_001464935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/935/GCA_001464935.1_Gammaproteobacteria_bacterium_Ga0077536	-	-
Rhizobiales bacterium Ga0077537	1752224	PRJNA301005	301005	Proteobacteria	Alphaproteobacteria	4.83659	66.2	-	LNEM01	37	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254506	GCA_001464955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/955/GCA_001464955.1_Rhizobiales_bacterium_Ga0077537	-	-
Gammaproteobacteria bacterium Ga0074134	1752213	PRJNA301005	301005	Proteobacteria	Gammaproteobacteria	2.90052	56.5	-	LNEJ01	80	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254503	GCA_001464965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/965/GCA_001464965.1_Gammaproteobacteria_bacterium_Ga0074134	-	-
Actinobacteria bacterium Ga0077541	1752189	PRJNA301005	301005	Terrabacteria group	Actinobacteria	3.15547	73.9	-	LNEQ01	307	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254510	GCA_001464995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/464/995/GCA_001464995.1_Actinobacteria_bacterium_Ga0077541	-	-
Deltaproteobacteria bacterium Ga0077539	1752210	PRJNA301005	301005	Proteobacteria	delta/epsilon subdivisions	9.69747	67.9	-	LNEO01	486	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254508	GCA_001465015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/465/015/GCA_001465015.1_Deltaproteobacteria_bacterium_Ga0077539	-	-
Sellimonas intestinalis	1653434	PRJNA283562	283562	Terrabacteria group	Firmicutes	3.18905	45.3	-	LGAJ01	33	3089	2934	9/10/15	4/11/17	Contig	Seoul National University	SAMN03846811	GCA_001280875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/875/GCA_001280875.1_ASM128087v1	-	BR72
Pseudorhodobacter psychrotolerans	1678131	PRJNA286976	286976	Proteobacteria	Alphaproteobacteria	5.07908	60.3	-	LGIC01	93	5046	4703	9/18/15	4/11/17	Contig	Korea Polar Research Institute	SAMN03785584	GCA_001294535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/535/GCA_001294535.1_ASM129453v1	-	PAMC 27389
Enterococcus silesiacus	332949	PRJNA270385	270385	Terrabacteria group	Firmicutes	3.91539	36.4	-	JXLC01	72	3675	3580	11/25/16	4/14/17	Contig	Inner Mongolia Agricultural University	SAMN03267185	GCA_001886225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/225/GCA_001886225.1_ASM188622v1	-	DSM 22801
Propionibacterium sp. oral taxon 193	671223	PRJNA282954	282954	Terrabacteria group	Actinobacteria	2.64921	60.0235	chromosome:NZ_CP017040.1/CP017040.1; plasmid unnamed1:NZ_CP017041.1/CP017041.1	-	2	2680	2467	8/31/16	4/17/17	Complete Genome	The Forsyth Institute	SAMN05413927	GCA_001717565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/565/GCA_001717565.1_ASM171756v1	-	F0672
Exiguobacterium enclense	1017277	PRJNA302095	302095	Terrabacteria group	Firmicutes	3.25281	46.8	-	LNQL01	11	3349	3251	12/4/15	4/11/17	Contig	CSIR-National Chemical Laboratory	SAMN04263895	GCA_001456895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/895/GCA_001456895.1_ASM145689v1	25716950	NIO-1109
Bacillus enclensis	1402860	PRJNA302096	302096	Terrabacteria group	Firmicutes	4.48199	44.5	-	LNQI01	18	4493	4345	12/4/15	4/11/17	Scaffold	CSIR-National Chemical Laboratory	SAMN04263896	GCA_001456935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/935/GCA_001456935.1_ASM145693v1	24174310	SGD-1123
Microbacterium enclense	993073	PRJNA302088	302088	Terrabacteria group	Actinobacteria	3.6665	70.3	-	LNQG01	15	3374	3256	12/4/15	4/11/17	Scaffold	CSIR-National Chemical Laboratory	SAMN04263881	GCA_001456955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/955/GCA_001456955.1_ASM145695v1	25829331	NIO-1002
Rhodococcus enclensis	1049584	PRJNA302094	302094	Terrabacteria group	Actinobacteria	7.47874	62.3	-	LNQH01	76	7099	6827	12/4/15	4/11/17	Scaffold	CSIR-National Chemical Laboratory	SAMN04263893	GCA_001456965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/965/GCA_001456965.1_ASM145696v1	24854006	NIO-1009
Bacillus cellulasensis	1049581	PRJNA302098	302098	Terrabacteria group	Firmicutes	3.61506	41.3	-	LNQK01	23	3766	3633	12/4/15	4/16/17	Scaffold	CSIR-National Chemical Laboratory	SAMN04263913	GCA_001457015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/015/GCA_001457015.1_ASM145701v1	26410293	NIO-1130
Arthrobacter enclensis	993070	PRJNA302090	302090	Terrabacteria group	Actinobacteria	4.22623	67.1	-	LNQM01	18	3909	3777	12/4/15	4/11/17	Scaffold	CSIR-National Chemical Laboratory	SAMN04263892	GCA_001457025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/025/GCA_001457025.1_ASM145702v1	"2,505,202,227,257,200"	NIO-1008
Fictibacillus enclensis	1017270	PRJNA302089	302089	Terrabacteria group	Firmicutes	4.5009	44.3	-	LNQN01	10	4624	4458	12/4/15	4/11/17	Scaffold	CSIR-National Chemical Laboratory	SAMN04263890	GCA_001457035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/035/GCA_001457035.1_ASM145703v1	24343101	NIO-1003
Gorillibacterium sp. SN4	1689269	PRJEB10831	295676	Terrabacteria group	Firmicutes	5.26377	53.3	-	CYUM01	7	4763	4617	9/23/15	4/11/17	Scaffold	URMITE	SAMEA3539502	GCA_001457415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/415/GCA_001457415.1_Gorillibacterium_timonense	-	SN4
Candidatus Providencia siddallii	1715285	PRJEB6644	298700	Proteobacteria	Gammaproteobacteria	0.843819	23.9	-	CVRF01	4	752	621	10/14/15	10/22/15	Contig	Centre de Biologie pour la Gestion des Populations (CBGP - UMR1062)	SAMEA3416695	GCA_001457715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/715/GCA_001457715.1_PsisOffGC1.1	-	officinalis
Vitreoscilla sp. SN6	1689272	PRJEB11506	300216	Proteobacteria	Betaproteobacteria	3.71677	49.4	-	CZPV01	10	3675	3508	10/28/15	4/11/17	Scaffold	URMITE	SAMEA3635090	GCA_001457815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/815/GCA_001457815.1_Vitreoscilla_massiliensis	-	SN6
Fenollaria timonensis	1723384	PRJEB11508	300217	Terrabacteria group	Firmicutes	1.73938	35.7	-	CZPW01	8	1638	1531	10/29/15	4/10/17	Scaffold	URMITE	SAMEA3635103	GCA_001457835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/835/GCA_001457835.1_Micromassilia_timonensis	-	GD5
Ruegeria atlantica	81569	PRJEB10690	301487	Proteobacteria	Alphaproteobacteria	4.81615	56.4	-	CYPU01	75	4758	4506	11/7/15	4/11/17	Contig	UVEG	SAMEA3528420	GCA_001458195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/195/GCA_001458195.1_R.atlanticaCECT4292_SeqMan_Prokka	-	CECT 4292
Thalassobius mediterraneus	340021	PRJEB10713	301580	Proteobacteria	Alphaproteobacteria	3.43166	58.7	-	CYSF01	19	3299	3196	11/9/15	4/11/17	Contig	UVEG	SAMEA3532031	GCA_001458435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/435/GCA_001458435.1_T.mediterraneus_CECT5383_Seqman_Prokka	-	CECT 5383
Shimia marina	321267	PRJEB10692	301488	Proteobacteria	Alphaproteobacteria	4.00186	57.4	-	CYPW01	45	3863	3759	11/7/15	4/16/17	Scaffold	UVEG	SAMEA3528422	GCA_001458175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/175/GCA_001458175.1_S.marinaCECT7688_Velvet_Prokka	-	CECT 7688
Thalassobius sp. CECT 5114	1715690	PRJEB10704	301517	Proteobacteria	Alphaproteobacteria	3.47969	54.5	-	CYUE01	26	3443	3345	11/8/15	4/11/17	Contig	UVEG	SAMEA3542246	GCA_001458235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/235/GCA_001458235.1_Thalassobius_sp._CECT5114_Seqman_Prokka	-	CECT 5114
Thalassobius gelatinovorus	53501	PRJEB10706	301518	Proteobacteria	Alphaproteobacteria	3.9028	58.4	-	CYSA01	30	3800	3682	11/8/15	4/11/17	Contig	UVEG	SAMEA3530152	GCA_001458355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/355/GCA_001458355.1_Tgelatinovorus_CECT4357_Seqman_Prokka	-	CECT 4357
Tropicibacter naphthalenivorans	441103	PRJEB20328	382110	Proteobacteria	Alphaproteobacteria	4.44949	63.2	-	FWXX01	32	4199	4046	4/8/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488093	GCA_900176475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/475/GCA_900176475.1_IMG-taxon_2622736506_annotated_assembly	-	DSM 19561
Leisingera aquaemixtae	1396826	PRJEB10724	301583	Proteobacteria	Alphaproteobacteria	4.61406	64.4	-	CYSR01	40	4381	4230	11/9/15	4/11/17	Contig	UVEG	SAMEA3539551	GCA_001458395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/395/GCA_001458395.1_L.aquaemixtaeCECT8399_CISA_Prokka	-	CECT 8399
Tropicibacter multivorans	928856	PRJEB10718	301581	Proteobacteria	Alphaproteobacteria	4.17562	59.7	-	CYSD01	45	3903	3779	11/9/15	4/11/17	Contig	UVEG	SAMEA3532111	GCA_001458415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/415/GCA_001458415.1_Tr.multivorans_CECT7557_Seqman_Prokka	-	CECT 7557
Chrysosporum ovalisporum	75695	PRJEB7262	301575	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.46798	50.4	-	CDHJ01	9162	3341	2851	11/9/15	11/9/15	Contig	ERA7	SAMEA2786506	GCA_001458455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/455/GCA_001458455.1_Assembly_of_Aphanizomenon_ovalisporum	-	UAM-MAO
Clostridium neonatale	137838	PRJEB11408	301855	Terrabacteria group	Firmicutes	4.71084	28.4	-	CZLD01	17	4185	3997	11/12/15	4/16/17	Scaffold	URMITE	SAMEA3610495	GCA_001458595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/595/GCA_001458595.1_Clostridium_neonatale	-	LCDC no.99-A-005
Nitrospira sp. ND1	1658518	PRJEB18127	379798	Nitrospirae	Nitrospira	4.45493	58.9	-	FWEX01	6	4155	4038	3/22/17	4/3/17	Contig	WASEDA university	SAMEA17758168	GCA_900170025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/025/GCA_900170025.1_NSND_Contig	-	-
Bifidobacterium longum	216816	PRJNA270904	270904	Terrabacteria group	Actinobacteria	2.45576	60.0068	chromosome:NZ_CP010453.1/CP010453.1; plasmid pRY68:NZ_CP010454.1/CP010454.1	-	2	2128	1961	9/17/15	4/4/17	Complete Genome	Yonsei University	SAMN03271682	GCA_001293145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/145/GCA_001293145.1_ASM129314v1	-	BG7
Enterococcus rotai	118060	PRJNA226735	226735	Terrabacteria group	Firmicutes	3.74611	36.7	chromosome:CP013655.1	-	1	3323	3253	12/11/15	12/11/15	Chromosome	Gateway Technical College	SAMN04296136	GCA_001465345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/465/345/GCA_001465345.1_ASM146534v1	-	LMG 26678
Serratia marcescens SMB2099	1401254	PRJEB4597	359610	Proteobacteria	Gammaproteobacteria	5.12309	60	chromosome I:NZ_HG738868.1/HG738868.1	-	1	4832	4625	1/5/17	3/18/17	Complete Genome	JLU	SAMEA3865280	GCA_900029885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/885/GCA_900029885.1_Sm_SMB2099	-	SMB2099
Bifidobacterium longum	216816	PRJNA301703	301703	Terrabacteria group	Actinobacteria	2.26406	60	chromosome:NZ_CP013673.1/CP013673.1	-	1	1942	1796	9/6/16	4/5/17	Complete Genome	Alimentary Health and University College Cork	SAMN04254466	GCA_001719085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/085/GCA_001719085.1_ASM171908v1	-	35624
Cutibacterium acnes	1747	PRJNA292488	292488	Terrabacteria group	Actinobacteria	2.56035	60	chromosome:NZ_CP012351.1/CP012351.1	-	1	2567	2413	12/18/15	4/4/17	Complete Genome	None	SAMN03982942	GCA_001469595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/595/GCA_001469595.1_ASM146959v1	26857276	PA_21_1_L1
Dehalogenimonas alkenigignens	1217799	PRJNA261058	261058	Terrabacteria group	Chloroflexi	1.85158	55.9	-	LFDV01	1	1940	1856	12/15/15	4/16/17	Scaffold	Louisiana State University	SAMN03068710	GCA_001466665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/665/GCA_001466665.1_ASM146666v1	27340512	IP3-3
Cutibacterium acnes	1747	PRJNA292485	292485	Terrabacteria group	Actinobacteria	2.49196	60	chromosome:NZ_CP012354.1/CP012354.1	-	1	2509	2376	12/18/15	4/4/17	Complete Genome	None	SAMN03982899	GCA_001469655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/655/GCA_001469655.1_ASM146965v1	26857276	PA_12_1_L1
Legionella brunensis	29422	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	3.75074	38.7	-	LNXV01	37	3340	3181	12/15/15	4/16/17	Scaffold	Tel Aviv University	SAMN04274767	GCA_001467025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/025/GCA_001467025.1_ASM146702v1	26752266	ATCC 43878
Fluoribacter bozemanae	447	PRJNA281295	281295	Proteobacteria	Gammaproteobacteria	4.1135	37.9	-	LBAW01	112	3669	3495	5/19/16	4/12/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03486950	GCA_001648595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/595/GCA_001648595.1_ASM164859v1	-	ATCC 33217
nitrifying bacterium enrichment culture	1648056	PRJEB10139	302401	environmental samples	nitrifying bacterium enrichment culture	6.80689	63	-	CZLC01	112	-	-	11/14/15	11/14/15	Contig	AALBORG UNIVERSITY	SAMEA3498366	GCA_001458715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/715/GCA_001458715.1_ENR6_N3_assembly	-	-
bacterium 2013Arg42i	1561003	PRJEB7439	304961	unclassified Bacteria	unclassified Bacteria (miscellaneous)	2.14938	35.7	chromosome I:NZ_LN906597.1/LN906597.1	-	1	1557	1487	12/3/15	7/29/17	Chromosome	Functional Genomics Genter Zurich	SAMEA2826832	GCA_001460935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/460/935/GCA_001460935.1_Ark11	-	2013Ark11
Legionella adelaidensis	45056	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	2.36766	38.9	-	LNKA01	21	2246	2161	12/15/15	4/17/17	Scaffold	Tel Aviv University	SAMN03842654	GCA_001467055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/055/GCA_001467055.1_ASM146705v1	26752266	1762-AUS-E
Legionella birminghamensis	28083	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	3.73766	43.5	-	LNXT01	54	3239	3110	12/15/15	4/16/17	Scaffold	Tel Aviv University	SAMN04274765	GCA_001467505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/505/GCA_001467505.1_ASM146750v1	26752266	CDC#1407-AL-14
Legionella worsleiensis	45076	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	3.06772	40.3	-	LNZC01	31	2680	2573	12/15/15	4/16/17	Scaffold	Tel Aviv University	SAMN04274800	GCA_001467535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/535/GCA_001467535.1_ASM146753v1	26752266	ATCC 49508
Legionella cincinnatiensis	28085	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	4.05388	36.8	-	LNXX01	54	3513	3322	12/15/15	4/16/17	Scaffold	Tel Aviv University	SAMN04274769	GCA_001467545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/545/GCA_001467545.1_ASM146754v1	26752266	CDC#72-OH-14
Legionella feeleii	453	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	3.55465	41	-	LNYB01	90	3309	3162	12/15/15	4/11/17	Scaffold	Tel Aviv University	SAMN04274773	GCA_001467625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/625/GCA_001467625.1_ASM146762v1	26752266	WO-44C
Enterobacter kobei	208224	PRJEB9821	382651	Proteobacteria	Gammaproteobacteria	4.71599	55.4	-	FYBC01	23	4575	4358	6/9/17	6/21/17	Contig	JUSTUS LIEBIG UNIVERSITY	SAMEA104113917	GCA_900185885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/885/GCA_900185885.1_Enterobacter_kobei_DSM27110T_ERS788665	-	-
Legionella erythra	448	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	3.23914	46.7	-	LNYA01	36	2986	2879	12/15/15	4/11/17	Scaffold	Tel Aviv University	SAMN04274772	GCA_001467615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/615/GCA_001467615.1_ASM146761v1	26752266	SE-32A-C8
Legionella gratiana	45066	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	3.9262	36.8	-	LNYE01	31	3475	3296	12/15/15	4/16/17	Scaffold	Tel Aviv University	SAMN04274776	GCA_001467695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/695/GCA_001467695.1_ASM146769v1	26752266	Lyon 8420412
Fluoribacter gormanii	464	PRJNA281301	281301	Proteobacteria	Gammaproteobacteria	3.81696	38.1	-	LBAY01	50	3331	3205	5/19/16	4/18/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03486957	GCA_001648685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/685/GCA_001648685.1_ASM164868v1	-	ATCC 33297
Cutibacterium acnes	1747	PRJNA270126	270126	Terrabacteria group	Actinobacteria	2.52244	60	chromosome:NZ_CP012647.1/CP012647.1	-	1	2502	2277	9/11/15	4/4/17	Complete Genome	Chosun University	SAMN03263080	GCA_001281065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/065/GCA_001281065.1_ASM128106v1	-	KCOM 1861 (= ChDC B594)
Legionella jamestowniensis	455	PRJNA322590	322590	Proteobacteria	Gammaproteobacteria	3.30515	39.5	-	LYOZ01	53	2944	2854	7/21/16	4/13/17	Contig	AGES	SAMN05170546	GCA_001691475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/475/GCA_001691475.1_ASM169147v1	-	974010_12
Legionella israelensis	454	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	3.06115	39.8	-	LNYH01	151	2870	2703	12/15/15	4/11/17	Scaffold	Tel Aviv University	SAMN04274778	GCA_001467785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/785/GCA_001467785.1_ASM146778v1	26752266	Bercovier 4
Legionella londiniensis	45068	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	2.40134	43.3	-	LNYK01	34	2229	2123	12/15/15	4/16/17	Scaffold	Tel Aviv University	SAMN04274782	GCA_001467825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/825/GCA_001467825.1_ASM146782v1	26752266	ATCC 49505
Legionella maceachernii	466	PRJEB19564	376367	Proteobacteria	Gammaproteobacteria	3.61112	40.5	-	FUXJ01	37	3245	3102	3/4/17	3/10/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745128	GCA_900167045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/045/GCA_900167045.1_IMG-taxon_2585428143_annotated_assembly	-	ATCC 35300
Legionella jordanis	456	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	3.0865	41.7	-	LNYJ01	11	2817	2713	12/15/15	4/11/17	Scaffold	Tel Aviv University	SAMN04274780	GCA_001467765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/765/GCA_001467765.1_ASM146776v1	26752266	BL-540
Legionella nautarum	45070	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	3.64943	39.7	-	LNYO01	27	3213	3090	12/15/15	4/16/17	Scaffold	Tel Aviv University	SAMN04274786	GCA_001467895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/895/GCA_001467895.1_ASM146789v1	26752266	ATCC 49506
Legionella parisiensis	45071	PRJNA312141	312141	Proteobacteria	Gammaproteobacteria	4.23228	38	-	LSOG01	222	3817	3384	9/20/16	4/13/17	Contig	Goethe University	SAMN04495209	GCA_001736145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/736/145/GCA_001736145.1_ASM173614v1	-	DSM 19216
Legionella quateirensis	45072	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	4.20059	39	-	LNYR01	50	3555	3435	12/15/15	4/16/17	Scaffold	Tel Aviv University	SAMN04274789	GCA_001467955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/955/GCA_001467955.1_ASM146795v1	26752266	ATCC 49507
Legionella quinlivanii	45073	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	3.54625	43	-	LNYS01	27	3050	2947	12/15/15	4/16/17	Scaffold	Tel Aviv University	SAMN04274790	GCA_001467975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/975/GCA_001467975.1_ASM146797v1	26752266	CDC#1442-AUS-E
Legionella steelei	947033	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	4.22717	38.8	-	LNYY01	21	3741	3593	12/15/15	4/16/17	Scaffold	Tel Aviv University	SAMN04274796	GCA_001468005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/005/GCA_001468005.1_ASM146800v1	26752266	IMVS3376
Legionella tucsonensis	40335	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	3.35649	37.4	-	LNZA01	12	3005	2872	12/15/15	4/16/17	Scaffold	Tel Aviv University	SAMN04274798	GCA_001468035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/035/GCA_001468035.1_ASM146803v1	26752266	ATCC 49180
Legionella steigerwaltii	460	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	3.94871	38.3	-	LNYZ01	44	3499	3382	12/15/15	4/11/17	Scaffold	Tel Aviv University	SAMN04274797	GCA_001468065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/065/GCA_001468065.1_ASM146806v1	26752266	SC-18-C9
Legionella waltersii	66969	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	3.65067	39.1	-	LNZB01	60	3360	3211	12/15/15	4/16/17	Scaffold	Tel Aviv University	SAMN04274799	GCA_001468085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/085/GCA_001468085.1_ASM146808v1	26752266	ATCC 51914
Legionella rubrilucens	458	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	3.12967	47.7	-	LNYT01	22	2905	2808	12/15/15	4/11/17	Scaffold	Tel Aviv University	SAMN04274791	GCA_001468125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/125/GCA_001468125.1_ASM146812v1	26752266	WA-270A-C2
Legionella santicrucis	45074	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	4.82092	36.7	-	LNYU01	92	4281	3986	12/15/15	4/16/17	Scaffold	Tel Aviv University	SAMN04274793	GCA_001468135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/135/GCA_001468135.1_ASM146813v1	26752266	SC-63-C7
Legionella spiritensis	452	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	3.31353	45.4	-	LNYX01	35	3010	2905	12/15/15	4/11/17	Scaffold	Tel Aviv University	SAMN04274795	GCA_001468165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/165/GCA_001468165.1_ASM146816v1	26752266	Mt.St.Helens-9
Bifidobacterium longum subsp. longum GT15	1300227	PRJNA191592	191592	Terrabacteria group	Actinobacteria	2.33752	60	chromosome:NZ_CP006741.1/CP006741.1	-	1	2021	1844	11/5/14	4/2/17	Complete Genome	Vavilov Institute of General Genetics	SAMN03093230	GCA_000772485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/485/GCA_000772485.1_ASM77248v1	25523785	GT15
Lacinutrix jangbogonensis	1469557	PRJNA239392	239392	FCB group	Bacteroidetes/Chlorobi group	4.01753	32.2	-	JSWF01	46	3524	3353	12/4/14	4/9/17	Contig	KORIA POLAR RESEARCH INSTITUTE	SAMN02665270	GCA_000797445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/445/GCA_000797445.1_ASM79744v1	25038886	PAMC 27137
Lampropedia cohaerens	1610491	PRJNA282900	282900	Proteobacteria	Betaproteobacteria	3.15892	63.5	-	LBNQ01	41	2845	2693	5/8/15	4/18/17	Contig	University of Delhi	SAMN03580769	GCA_001005215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/215/GCA_001005215.1_ASM100521v1	-	CT6
Propionibacterium acnes hdn-1	1276648	PRJNA184921	184921	Terrabacteria group	Actinobacteria	2.49456	60	chromosome:NZ_CP006032.1/CP006032.1	-	1	2509	2367	6/17/14	4/2/17	Complete Genome	BAYGEN	SAMN03081471	GCA_000709495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/495/GCA_000709495.1_ASM70949v1	-	hdn-1
Pseudomonas helleri	1608996	PRJNA274345	274345	Proteobacteria	Gammaproteobacteria	5.67629	58.1	-	JYLD01	37	5110	4962	6/30/15	6/26/17	Contig	"Zentralinstitut fuer Ernaehrungs- und Lebensmittelforschung (ZIEL), WZW, TUM"	SAMN03328804	GCA_001043025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/025/GCA_001043025.1_MG221	26675012	DSM 29165
Geobacillus icigianus	1430331	PRJNA246135	246135	Terrabacteria group	Firmicutes	3.45781	52	-	JPYA01	207	3551	3168	9/8/14	4/9/17	Contig	THE INSTITUTE OF CYTOLOGY AND GENETICS	SAMN02850065	GCA_000750005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/005/GCA_000750005.1_ASM75000v1	25342695	G1w1
candidate division TM6 bacterium SOIL82	1655312	PRJNA283243	283243	unclassified Bacteria	Bacteria candidate phyla	1.00194	40.8	-	LDIZ01	13	-	-	12/17/15	3/8/16	Scaffold	University of Queensland	SAMN03614206	GCA_001468845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/845/GCA_001468845.1_ASM146884v1	26615204	-
candidate division TM6 bacterium UASB124	1655308	PRJNA283243	283243	unclassified Bacteria	Bacteria candidate phyla	1.50439	37.7	-	LDIV01	7	-	-	12/17/15	3/8/16	Scaffold	University of Queensland	SAMN03614202	GCA_001468855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/855/GCA_001468855.1_ASM146885v1	26615204	-
candidate division TM6 bacterium SOIL31	1655311	PRJNA283243	283243	unclassified Bacteria	Bacteria candidate phyla	1.4604	37.8	-	LDIY01	69	-	-	12/17/15	3/8/16	Scaffold	University of Queensland	SAMN03614205	GCA_001468865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/865/GCA_001468865.1_ASM146886v1	26615204	-
candidate division TM6 bacterium UASB293	1655309	PRJNA283243	283243	unclassified Bacteria	Bacteria candidate phyla	1.30209	38.5	-	LDIW01	127	-	-	12/17/15	3/8/16	Scaffold	University of Queensland	SAMN03614203	GCA_001468885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/885/GCA_001468885.1_ASM146888v1	26615204	-
candidate division TM6 bacterium UASB340	1655310	PRJNA283243	283243	unclassified Bacteria	Bacteria candidate phyla	1.07847	29.4	-	LDIX01	36	-	-	12/17/15	3/8/16	Scaffold	University of Queensland	SAMN03614204	GCA_001468925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/925/GCA_001468925.1_ASM146892v1	26615204	-
SAR324 cluster bacterium lautmerah10	1764262	PRJNA289734	289734	Proteobacteria	delta/epsilon subdivisions	3.49436	47.1	-	LNZD02	290	-	-	12/17/15	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04270322	GCA_001469005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/005/GCA_001469005.2_ASM146900v2	"2,686,839,827,377,620"	-
Trueperella bernardiae	59561	PRJNA299323	299323	Terrabacteria group	Actinobacteria	2.02887	65.4	-	LNIZ01	18	1815	1722	12/17/15	4/11/17	Contig	Public Health Agency of Canada	SAMN04196844	GCA_001469025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/025/GCA_001469025.1_ASM146902v1	26950329	LCDC 89-0504
Curtobacterium luteum	33881	PRJNA278177	278177	Terrabacteria group	Actinobacteria	3.58529	71.3	-	LDQC01	209	3415	3249	12/22/15	4/16/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401341	GCA_001475545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/545/GCA_001475545.1_ASM147554v1	26793183	NS184
Propionibacterium acnes TypeIA2 P.acn33	1114966	PRJNA76699	76699	Terrabacteria group	Actinobacteria	2.48962	60	chromosome:NC_016516.1/CP003195.1	-	1	2501	2368	12/23/11	4/10/17	Complete Genome	BAYGEN	SAMN02602998	GCA_000240015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/015/GCA_000240015.1_ASM24001v1	22374954	P.acn33
Haloprofundus marisrubri	1514971	PRJNA305170	305170	Euryarchaeota	Halobacteria	3.92956	62.5	-	LOPU01	41	3958	3845	12/18/15	4/10/17	Contig	"Red Sea Research Center, Saudi Arabia"	SAMN04318426	GCA_001469955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/955/GCA_001469955.1_ASM146995v1	-	SB9
Propionibacterium acnes TypeIA2 P.acn31	1114969	PRJNA76703	76703	Terrabacteria group	Actinobacteria	2.49877	60	chromosome:NC_016511.1/CP003197.1	-	1	2512	2382	12/23/11	4/10/17	Complete Genome	BAYGEN	SAMN02603000	GCA_000240055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/055/GCA_000240055.1_ASM24005v1	22374954	P.acn31
Pseudomonas weihenstephanensis	1608994	PRJNA274345	274345	Proteobacteria	Gammaproteobacteria	5.00439	57.1	-	JYLG01	47	4688	4463	6/30/15	6/30/17	Contig	"Zentralinstitut fuer Ernaehrungs- und Lebensmittelforschung (ZIEL), WZW, TUM"	SAMN03328807	GCA_001042975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/975/GCA_001042975.1_MG442	26675012	DSM 29140
Exiguobacterium indicum	296995	PRJNA278186	278186	Terrabacteria group	Firmicutes	3.08306	47.3	-	LDQV01	53	3208	3129	12/22/15	4/11/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401350	GCA_001475665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/665/GCA_001475665.1_ASM147566v1	26793183	RSA11
Curtobacterium oceanosedimentum	465820	PRJNA278203	278203	Terrabacteria group	Actinobacteria	3.36983	71.8	-	LDRB01	164	3175	3036	12/22/15	4/11/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401368	GCA_001475745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/745/GCA_001475745.1_ASM147574v1	26793183	NS263
Curtobacterium citreum	2036	PRJNA278178	278178	Terrabacteria group	Actinobacteria	3.4531	72.1	-	LDQB01	241	3335	3148	12/22/15	4/16/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401342	GCA_001475775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/775/GCA_001475775.1_ASM147577v1	26793183	NS330
Novosphingobium barchaimii	1420591	PRJNA278216	278216	Proteobacteria	Alphaproteobacteria	3.55273	63.4	-	LDRW01	75	3321	3190	12/22/15	4/11/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401381	GCA_001476695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/695/GCA_001476695.1_ASM147669v1	26793183	NS277
Sphingomonas yabuuchiae	172044	PRJNA278220	278220	Proteobacteria	Alphaproteobacteria	3.90916	66	-	LDTF01	190	3582	3395	12/22/15	4/17/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401385	GCA_001477495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/495/GCA_001477495.1_ASM147749v1	26793183	NS355
Propionibacterium acnes subsp. defendens ATCC 11828	1091045	PRJNA73675	73675	Terrabacteria group	Actinobacteria	2.48863	60	chromosome:NC_017550.1/CP003084.1	-	1	2473	2257	10/20/11	4/10/17	Complete Genome	BAYGEN	SAMN02602997	GCA_000231215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/215/GCA_000231215.1_ASM23121v1	22156398	ATCC 11828
Propionibacterium acnes 6609	1031709	PRJNA66845	66845	Terrabacteria group	Actinobacteria	2.56028	60	chromosome:NC_017535.1/CP002815.1	-	1	2561	2411	6/8/11	3/30/17	Complete Genome	BAYGEN	SAMN02602996	GCA_000217615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/615/GCA_000217615.1_ASM21761v1	21705602	6609
Candidatus Methanomethylophilus sp. 1R26	1769296	PRJNA305847	305847	Euryarchaeota	Thermoplasmata	1.72311	60.4	-	LOPS01	50	1809	1380	12/22/15	4/11/17	Contig	Aarhus University	SAMN04326629	GCA_001481295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/295/GCA_001481295.1_ASM148129v1	26893425	1R26
Luteimonas abyssi	1247514	PRJNA269334	269334	Proteobacteria	Gammaproteobacteria	3.98819	69.2	-	JUKH01	6	3438	3332	12/23/15	4/11/17	Scaffold	Ocean University of China	SAMN03253145	GCA_001482195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/195/GCA_001482195.1_ASM148219v1	26690083	XH031
Propionibacterium acnes 266	909952	PRJNA56091	56091	Terrabacteria group	Actinobacteria	2.49458	60	chromosome:NC_017534.1/CP002409.1	-	1	2512	2370	5/11/11	3/30/17	Complete Genome	Georg-August-University Goettingen	SAMN02603263	GCA_000213155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/155/GCA_000213155.1_ASM21315v1	21738717	266
Streptomyces silvensis	1765722	PRJNA304595	304595	Terrabacteria group	Actinobacteria	9.74133	72.1	-	LOCL01	92	8334	7815	12/24/15	3/12/17	Scaffold	McMaster University	SAMN04304558	GCA_001482415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/415/GCA_001482415.1_ASM148241v1	26893408	ATCC 53525
Streptomyces yangpuensis	1648182	PRJNA282566	282566	Terrabacteria group	Actinobacteria	7.64685	72.2	-	LBMK01	14	6966	6574	5/8/15	3/12/17	Scaffold	Fudan University	SAMN03571527	GCA_001005295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/295/GCA_001005295.1_ASM100529v1	26514767	fd2-tb
Dethiosulfatarculus sandiegensis	1429043	PRJNA229756	229756	Proteobacteria	delta/epsilon subdivisions	5.93499	52.1	-	AZAC01	82	5072	4914	2/23/15	4/11/17	Scaffold	University of Oklahoma	SAMN02419822	GCA_000931935.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/935/GCA_000931935.2_ASM93193v2	-	SPR
Acinetobacter seifertii	1530123	PRJNA183323	183323	Proteobacteria	Gammaproteobacteria	4.23169	38.6	-	APOO01	16	4180	3890	4/16/13	8/3/17	Scaffold	Broad Institute	SAMN01828183	GCA_000368065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/065/GCA_000368065.1_Acin_sp_NIPH_973_V1	25563912	NIPH 973
Siccibacter colletis	1505757	PRJNA246697	246697	Proteobacteria	Gammaproteobacteria	4.25552	57.1	-	JMSQ01	45	4134	3941	5/30/14	4/9/17	Scaffold	"Nottingham Trent University, UK"	SAMN02769539	GCA_000696575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/575/GCA_000696575.1_C_colletis_1383	24948763	1383
Oscillatoriales cyanobacterium MTP1	1751289	PRJNA301348	301348	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.64788	57.7	-	LNAA01	68	6219	6003	12/28/15	4/11/17	Contig	USAFA	SAMN04244272	GCA_001482745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/745/GCA_001482745.1_ASM148274v1	26893415	MTP1
Myroides marinus	703342	PRJNA302583	302583	FCB group	Bacteroidetes/Chlorobi group	3.9006	33.4	-	LPXI01	85	3516	3352	12/28/15	4/11/17	Contig	Huaqiao University	SAMN04272208	GCA_001482835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/835/GCA_001482835.1_ASM148283v1	-	719127
Propionibacterium acnes KPA171202	267747	PRJNA12460	12460	Terrabacteria group	Actinobacteria	2.56026	60	chromosome:NC_006085.1/AE017283.1	-	1	2565	2416	7/30/04	3/29/17	Complete Genome	Goettingen Genomics Laboratory	SAMN02603281	GCA_000008345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/345/GCA_000008345.1_ASM834v1	15286373	KPA171202
Thermococcus celericrescens	227598	PRJNA298838	298838	Euryarchaeota	Thermococci	2.33714	54.3	-	LLYW01	73	2579	2331	1/4/16	4/16/17	Contig	"Kyungpook National University, Shin's Lab."	SAMN04166689	GCA_001484195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/195/GCA_001484195.1_ASM148419v1	-	DSM 17994
Glutamicibacter halophytocola	1933880	PRJNA289022	289022	Terrabacteria group	Actinobacteria	3.91842	59.9893	chromosome:NZ_CP012750.1/CP012750.1; plasmid KLBMP5180-plasmid:NZ_CP012751.1/CP012751.1	-	2	3623	3505	9/29/15	4/17/17	Complete Genome	Jiangsu Normal University	SAMN03840760	GCA_001302565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/565/GCA_001302565.1_ASM130256v1	-	KLBMP5180
Streptomyces kanasensis	936756	PRJNA303097	303097	Terrabacteria group	Actinobacteria	7.02626	73.9	-	LNSV01	225	6344	5749	1/4/16	3/12/17	Contig	Northwest A & F University	SAMN04285690	GCA_001484625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/625/GCA_001484625.1_ASM148462v1	-	ZX01
Bacillus shacheensis	1649580	PRJNA299368	299368	Terrabacteria group	Firmicutes	3.9822	47.1	-	LLYY01	86	3957	3783	1/5/16	4/11/17	Scaffold	Sichuan University	SAMN04207873	GCA_001484965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/965/GCA_001484965.1_ASM148496v1	-	HNA-14
Type-B symbiont of Plautia stali	1560354	PRJDB3129	302137	Proteobacteria	Gammaproteobacteria	2.42919	55.9	-	BBOA01	35	-	-	11/11/15	5/20/16	Contig	The Open University of Japan	SAMD00020669	GCA_001485295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/295/GCA_001485295.1_B_1.0	27571756	-
Type-C symbiont of Plautia stali	1560355	PRJDB3130	302138	Proteobacteria	Gammaproteobacteria	5.14107	57.4	-	BBOB01	220	4882	4578	11/11/15	4/11/17	Contig	The Open University of Japan	SAMD00020670	GCA_001485315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/315/GCA_001485315.1_C_1.0	27571756	-
Type-D symbiont of Plautia stali	1560356	PRJDB3131	302139	Proteobacteria	Gammaproteobacteria	5.53706	53.8	-	BBOC01	280	5311	4933	11/11/15	4/11/17	Contig	The Open University of Japan	SAMD00020671	GCA_001485335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/335/GCA_001485335.1_D_1.0	27571756	-
Type-E symbiont of Plautia stali	1560357	PRJDB3132	302140	Proteobacteria	Gammaproteobacteria	5.40902	53.7	-	BBOD01	165	5064	4743	11/11/15	4/11/17	Contig	The Open University of Japan	SAMD00020672	GCA_001485355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/355/GCA_001485355.1_D_1.0	27571756	-
Type-F symbiont of Plautia stali	1560358	PRJDB3133	302141	Proteobacteria	Gammaproteobacteria	4.6709	56.7	-	BBOE01	141	4457	4205	11/11/15	4/11/17	Contig	The Open University of Japan	SAMD00020673	GCA_001485375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/375/GCA_001485375.1_F_1.0	27571756	-
Tepidanaerobacter syntrophicus	224999	PRJDB4393	304720	Terrabacteria group	Firmicutes	2.4279	38.6	-	BCMU01	10	2358	2243	12/4/15	4/16/17	Contig	AIST	SAMD00043586	GCA_001485475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/475/GCA_001485475.1_ASM148547v1	26868399	JL
Solirubrum puertoriconensis	1751427	PRJNA293638	293638	FCB group	Bacteroidetes/Chlorobi group	4.80472	58.8	-	LNAL01	8	4186	4095	12/29/15	3/2/17	Contig	UPR- Mayaguez	SAMN04246309	GCA_001483135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/483/135/GCA_001483135.1_ASM148313v1	26981418	MC1A
alpha proteobacterium 3107	1526414	PRJNA255756	255756	Proteobacteria	Alphaproteobacteria	2.16884	63.6	-	JPPB01	337	-	-	12/29/15	12/29/15	Contig	Haifa University- The Leon H. Charney School of Marine Sciences	SAMN02928564	GCA_001483205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/483/205/GCA_001483205.1_ASM148320v1	26655754	-
Burkholderia sp. PAMC 28687	1795874	PRJNA311142	311142	Proteobacteria	Betaproteobacteria	6.88127	59.9824	chromosome 1:NZ_CP014505.1/CP014505.1; chromosome 2:NZ_CP014506.1/CP014506.1; chromosome 3:NZ_CP014507.1/CP014507.1; plasmid 1:NZ_CP014508.1/CP014508.1; plasmid 2:NZ_CP014509.1/CP014509.1; plasmid 3:NZ_CP014510.1/CP014510.1; plasmid 4:NZ_CP014511.1/CP014511.1; plasmid 5:NZ_CP014512.1/CP014512.1	-	8	6396	6128	2/29/16	4/12/17	Complete Genome	Korea Polar Research Institute	SAMN04479209	GCA_001577465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/465/GCA_001577465.1_ASM157746v1	-	PAMC28687
Serinicoccus chungangensis	767452	PRJNA307150	307150	Terrabacteria group	Actinobacteria	3.55699	72.9	-	LQBL01	33	3280	3136	12/31/15	4/16/17	Scaffold	Institute of Microbial Technology	SAMN04376036	GCA_001483745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/483/745/GCA_001483745.1_ASM148374v1	26966212	CD08_5
Nesterenkonia jeotgali	317018	PRJNA307153	307153	Terrabacteria group	Actinobacteria	2.92519	67.6	-	LQBM01	8	2688	2593	12/31/15	4/16/17	Contig	Institute of Microbial Technology	SAMN04376039	GCA_001483765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/483/765/GCA_001483765.1_ASM148376v1	-	CD08_7
Shigella dysenteriae 1012	358708	PRJNA16194	16194	Proteobacteria	Gammaproteobacteria	5.23553	50.6	-	AAMJ02	189	5834	4821	12/9/05	8/4/17	Contig	TIGR	SAMN02435888	GCA_000168075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/075/GCA_000168075.1_ASM16807v1	-	1012
Halogeometricum borinquense DSM 11551	469382	PRJNA20743	20743	Euryarchaeota	Halobacteria	3.94447	59.9709	chromosome:NC_014729.1/CP001690.1; plasmid pHBOR01:NC_014735.1/CP001691.1; plasmid pHBOR02:NC_014731.1/CP001692.1; plasmid pHBOR03:NC_014736.1/CP001693.1; plasmid pHBOR04:NC_014732.1/CP001694.1; plasmid pHBOR05:NC_014737.1/CP001695.1	-	6	3889	3774	11/22/10	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002580	GCA_000172995.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/995/GCA_000172995.2_ASM17299v2	21304651	PR 3
Granulicella tundricola MP5ACTX9	1198114	PRJNA47621	47621	Acidobacteria	Acidobacteriia	5.50398	59.968	chromosome:NC_015064.1/CP002480.1; plasmid pACIX901:NC_015057.1/CP002481.1; plasmid pACIX903:NC_015058.1/CP002483.1; plasmid pACIX904:NC_015059.1/CP002484.1; plasmid pACIX905:NC_015060.1/CP002485.1; plasmid pACIX902:NC_015065.1/CP002482.1	-	6	4757	4601	2/2/11	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00013395	GCA_000178975.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/975/GCA_000178975.2_ASM17897v2	-	MP5ACTX9
Acetobacter ghanensis	431306	PRJEB7123	307416	Proteobacteria	Alphaproteobacteria	2.84394	56.9043	chromosome I:NZ_LN609302.1/LN609302.1; plasmid 1P:NZ_LN609303.1/LN609303.1; plasmid 2P:NZ_LN609304.1/LN609304.1	-	3	2686	2454	1/3/16	4/16/17	Chromosome	Vrije Universiteit Brussel	SAMEA2738364	GCA_001499675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/675/GCA_001499675.1_Acetobacter_ghanensis	-	LMG 23848T
Thiocapsa sp. KS1	610332	PRJEB9229	307431	Proteobacteria	Gammaproteobacteria	10.3826	57.2	-	CVPF01	43	4915	4432	1/3/16	7/29/17	Scaffold	Univie	SAMEA3375904	GCA_001499735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/735/GCA_001499735.1_Thiocapsa_sp._KS1	-	KS1
Bittarella massiliensis	1720313	PRJEB11863	304137	Terrabacteria group	Firmicutes	2.80698	63.1	-	FAUJ01	9	2648	2522	11/29/15	4/11/17	Scaffold	URMITE	SAMEA3673147	GCA_001486165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/486/165/GCA_001486165.1_Bittarella_massiliensis	-	GD6
Eggerthellaceae bacterium AT8	1720315	PRJEB11867	304139	Terrabacteria group	Actinobacteria	2.09077	63.6	-	FAUL01	9	1834	1738	11/29/15	4/11/17	Scaffold	URMITE	SAMEA3673154	GCA_001486445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/486/445/GCA_001486445.1_Hugonella_massiliensis	-	AT8
Fournierella massiliensis	1650663	PRJEB11864	304138	Terrabacteria group	Firmicutes	3.82951	56	-	FAUK01	19	3664	3478	11/29/15	4/11/17	Scaffold	URMITE	SAMEA3673149	GCA_001486665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/486/665/GCA_001486665.1_Fournierella_massiliensis	-	AM2
Streptomyces specialis	498367	PRJEB9981	291154	Terrabacteria group	Actinobacteria	5.88416	72.6	-	FAXE01	143	5427	5003	12/6/15	3/12/17	Scaffold	URMITE	SAMEA3696889	GCA_001493375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/375/GCA_001493375.1_Streptomyces_specialis	-	type strain: GW41-1564
Olsenella scatoligenes	1299998	PRJNA305607	305607	Terrabacteria group	Actinobacteria	2.46956	62.4	-	LOJF01	16	2142	2053	1/5/16	4/11/17	Contig	Aarhus University	SAMN04329949	GCA_001494635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/635/GCA_001494635.1_ASM149463v1	26950328	SK9K4
Pseudomonas fluorescens A506	1037911	PRJNA67529	67529	Proteobacteria	Gammaproteobacteria	6.01955	59.9233	chromosome:NC_017911.1/CP003041.1; plasmid pA506:NC_021361.1/CP003042.1	-	2	5563	5371	5/11/12	4/1/17	Complete Genome	USDA-ARS	SAMN02604280	GCA_000262325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/325/GCA_000262325.2_ASM26232v2	22792073	A506
Staphylococcus auricularis	29379	PRJNA298382	298382	Terrabacteria group	Firmicutes	2.20171	37.3	-	LLER01	54	2089	1970	1/6/16	4/16/17	Contig	Harbin Medical University	SAMN04158717	GCA_001500315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/500/315/GCA_001500315.1_ASM150031v1	-	DSM 20609
Chryseobacterium greenlandense	345663	PRJNA299509	299509	FCB group	Bacteroidetes/Chlorobi group	4.03652	34.1	-	LMAI01	21	3718	3599	1/7/16	4/16/17	Contig	GCAT-SEEK	SAMN04209272	GCA_001507325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/325/GCA_001507325.1_ASM150732v1	-	UMB34
Flavobacteriaceae bacterium CRH	1742859	PRJNA299508	299508	FCB group	Bacteroidetes/Chlorobi group	5.82873	33.2	-	LMAJ01	92	5041	4872	1/7/16	4/11/17	Contig	GCAT-SEEK	SAMN04209273	GCA_001507425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/425/GCA_001507425.1_ASM150742v1	-	CRH
Labrenzia sp. VG12	2021862	PRJNA394988	394988	Proteobacteria	Alphaproteobacteria	5.97755	59.9	chromosome:NZ_CP022529.1/CP022529.1	-	1	5498	5345	7/31/17	8/3/17	Complete Genome	King Abdullah University of Science and Technology	SAMN07372103	GCA_002237595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/595/GCA_002237595.1_ASM223759v1	-	VG12
Wolbachia endosymbiont of Trichogramma pretiosum	125593	PRJNA168121	168121	Proteobacteria	Alphaproteobacteria	1.13381	33.8007	chromosome:NZ_CM003641.1/CM003641.1	LKEQ01	1	2549	2232	11/6/15	4/16/17	Chromosome	The i5k Initiative	SAMN04092459	GCA_001439985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/985/GCA_001439985.1_wTPRE_1.0	-	wTpre
Sphingobium czechense LL01	1420583	PRJNA227255	227255	Proteobacteria	Alphaproteobacteria	4.65611	63.6	-	JACT01	18	4598	4398	7/2/15	4/11/17	Scaffold	CSIRO	SAMN02727998	GCA_001046645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/645/GCA_001046645.1_S.czeLL01	25850427	LL01
Thermococcales archaeon 44_46	1635283	PRJNA278302	278302	Euryarchaeota	Thermococci	1.69512	43.5	-	LGET01	272	1987	1987	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445118	GCA_001507935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/935/GCA_001507935.1_ASM150793v1	26787827	-
Methanobacteriaceae archaeon 41_258	1635284	PRJNA278302	278302	Euryarchaeota	Methanobacteria	1.35651	40.7	-	LGEU01	169	1599	1599	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445119	GCA_001507955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/955/GCA_001507955.1_ASM150795v1	26787827	-
Euryarchaeota archaeon 55_53	1635285	PRJNA278302	278302	Euryarchaeota	unclassified Euryarchaeota	1.29365	55.6	-	LGEW01	42	1386	1386	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445121	GCA_001507975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/975/GCA_001507975.1_ASM150797v1	26787827	-
Clostridia bacterium 41_269	1635275	PRJNA278302	278302	Terrabacteria group	Firmicutes	1.67399	40.7	-	LGEZ01	30	1758	1758	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445125	GCA_001508005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/005/GCA_001508005.1_ASM150800v1	26787827	-
Moorella sp. 60_41	1635264	PRJNA278302	278302	Terrabacteria group	Firmicutes	1.37405	59.5	-	LGFA01	99	1369	1369	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445126	GCA_001508035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/035/GCA_001508035.1_ASM150803v1	26787827	-
Acetothermia bacterium 64_32	1635286	PRJNA278302	278302	unclassified Bacteria	Bacteria candidate phyla	1.8102	64.3	-	LGFI01	33	1785	1785	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445135	GCA_001508155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/155/GCA_001508155.1_ASM150815v1	26787827	-
Methanosarcinales archeaon 56_1174	1635287	PRJNA278302	278302	Euryarchaeota	Methanomicrobia	1.34075	55.5	-	LGFK01	59	1462	1462	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445137	GCA_001508185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/185/GCA_001508185.1_ASM150818v1	26787827	-
Clostridia bacterium 62_21	1635276	PRJNA278302	278302	Terrabacteria group	Firmicutes	1.29825	61.9	-	LGFR01	218	1509	1509	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445144	GCA_001508235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/235/GCA_001508235.1_ASM150823v1	26787827	-
Actinobacteria bacterium 66_15	1635289	PRJNA278302	278302	Terrabacteria group	Actinobacteria	2.22809	66.1	-	LGFV01	133	2275	2275	1/8/16	1/8/16	Scaffold	Lawrence Berkeley National Lab	SAMN03445149	GCA_001508275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/275/GCA_001508275.1_ASM150827v1	26787827	-
Parcubacteria bacterium 33_209	1635290	PRJNA278302	278302	unclassified Bacteria	Bacteria candidate phyla	0.51049	33	-	LGFW01	97	605	605	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445150	GCA_001508305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/305/GCA_001508305.1_ASM150830v1	26787827	-
candidate division TA06 bacterium 32_111	1635278	PRJNA278302	278302	unclassified Bacteria	Bacteria candidate phyla	1.86183	31.7	-	LGFX01	25	1769	1769	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445151	GCA_001508335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/335/GCA_001508335.1_ASM150833v1	26787827	-
Marinimicrobia bacterium 46_47	1635279	PRJNA278302	278302	FCB group	Candidatus Marinimicrobia	1.62941	45.8	-	LGFY01	246	1553	1553	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445152	GCA_001508355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/355/GCA_001508355.1_ASM150835v1	26787827	-
Synergistales bacterium 53_16	1635273	PRJNA278302	278302	Synergistetes	Synergistia	1.77223	52.9	-	LGGB01	296	1894	1894	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445155	GCA_001508395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/395/GCA_001508395.1_ASM150839v1	26787827	-
Parcubacteria bacterium 34_609	1641386	PRJNA278302	278302	unclassified Bacteria	Bacteria candidate phyla	0.567617	33.4	-	LGGG01	137	662	662	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445160	GCA_001508405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/405/GCA_001508405.1_ASM150840v1	26787827	-
Methanocalculus sp. 52_23	1641382	PRJNA278302	278302	Euryarchaeota	Methanomicrobia	1.97379	51.9	-	LGGJ01	224	2205	2205	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445163	GCA_001508455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/455/GCA_001508455.1_ASM150845v1	26787827	-
Anaerolineae bacterium 49_20	1641376	PRJNA278302	278302	Terrabacteria group	Chloroflexi	1.02318	49.6	-	LGGK01	134	966	966	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445164	GCA_001508475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/475/GCA_001508475.1_ASM150847v1	26787827	-
Microgenomates bacterium 39_7	1641390	PRJNA278302	278302	unclassified Bacteria	Bacteria candidate phyla	0.708389	39.2	-	LGGQ01	104	739	739	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445170	GCA_001508535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/535/GCA_001508535.1_ASM150853v1	26787827	-
candidate division TA06 bacterium 34_109	1635277	PRJNA278302	278302	unclassified Bacteria	Bacteria candidate phyla	2.11888	32.2	-	LGGX01	65	2014	2014	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445178	GCA_001508575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/575/GCA_001508575.1_ASM150857v1	26787827	-
Anaerolineaceae bacterium 46_22	1635294	PRJNA278302	278302	Terrabacteria group	Chloroflexi	1.45257	46.3	-	LGHA01	228	1439	1439	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445181	GCA_001508595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/595/GCA_001508595.1_ASM150859v1	26787827	-
Parcubacteria bacterium 32_520	1641387	PRJNA278302	278302	unclassified Bacteria	Bacteria candidate phyla	0.617799	32.4	-	LGHC01	139	848	848	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445183	GCA_001508635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/635/GCA_001508635.1_ASM150863v1	26787827	-
Atribacteria bacterium 34_868	1641392	PRJNA278302	278302	unclassified Bacteria	Bacteria candidate phyla	0.199772	34.6	-	LGHD01	56	237	237	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445184	GCA_001508655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/655/GCA_001508655.1_ASM150865v1	26787827	-
Methanomicrobiales archaeon 53_19	1641394	PRJNA278302	278302	Euryarchaeota	Methanomicrobia	2.62923	52.5	-	LGHF01	286	2864	2864	1/8/16	1/8/16	Scaffold	Lawrence Berkeley National Lab	SAMN03445186	GCA_001508695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/695/GCA_001508695.1_ASM150869v1	26787827	-
bacterium 42_11	1635281	PRJNA278302	278302	unclassified Bacteria	unclassified Bacteria (miscellaneous)	1.40708	41.9	-	LGFB01	245	1636	1636	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445127	GCA_001508835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/835/GCA_001508835.1_ASM150883v1	26787827	-
Thermoanaerobacterales bacterium 50_218	1635288	PRJNA278302	278302	Terrabacteria group	Firmicutes	1.77484	50.4	-	LGFL01	121	1824	1824	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445138	GCA_001508855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/855/GCA_001508855.1_ASM150885v1	26787827	-
Synergistales bacterium 54_24	1635272	PRJNA278302	278302	Synergistetes	Synergistia	1.65137	54	-	LGFQ01	152	1733	1733	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445143	GCA_001508935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/935/GCA_001508935.1_ASM150893v1	26787827	-
Synergistales bacterium 57_84	1641384	PRJNA278302	278302	Synergistetes	Synergistia	1.25513	57.3	-	LGGE01	161	1352	1352	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445158	GCA_001508975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/975/GCA_001508975.1_ASM150897v1	26787827	-
candidate division WS6 bacterium 34_10	1641389	PRJNA278302	278302	unclassified Bacteria	Bacteria candidate phyla	1.12756	34.2	-	LGGO01	264	1255	1255	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445168	GCA_001509035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/035/GCA_001509035.1_ASM150903v1	26787827	-
Microgenomates bacterium 39_6	1641391	PRJNA278302	278302	unclassified Bacteria	Bacteria candidate phyla	0.54338	38.6	-	LGGT01	105	589	589	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445173	GCA_001509055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/055/GCA_001509055.1_ASM150905v1	26787827	-
Synergistales bacterium 58_81	1635274	PRJNA278302	278302	Synergistetes	Synergistia	1.33317	57.3	-	LGGV01	148	1449	1449	1/8/16	1/8/16	Scaffold	Lawrence Berkeley National Lab	SAMN03445176	GCA_001509095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/095/GCA_001509095.1_ASM150909v1	26787827	-
Thermotogales bacterium 46_20	1635293	PRJNA278302	278302	Thermotogae	Thermotogae	2.03885	46.2	-	LGGZ01	288	2055	2055	1/8/16	1/8/16	Scaffold	Lawrence Berkeley National Lab	SAMN03445180	GCA_001509135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/135/GCA_001509135.1_ASM150913v1	26787827	-
Synergistales bacterium 54_9	1641385	PRJNA278302	278302	Synergistetes	Synergistia	1.53504	52.8	-	LGHG01	241	1654	1654	1/8/16	1/8/16	Scaffold	Lawrence Berkeley National Lab	SAMN03445187	GCA_001509155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/155/GCA_001509155.1_ASM150915v1	26787827	-
candidate division WS6 bacterium 36_33	1641388	PRJNA278302	278302	unclassified Bacteria	Bacteria candidate phyla	0.439774	36.7	-	LGGI01	80	482	482	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445162	GCA_001509265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/265/GCA_001509265.1_ASM150926v1	26787827	-
Bacteroidetes bacterium 38_7	1635292	PRJNA278302	278302	FCB group	Bacteroidetes/Chlorobi group	2.13732	37.8	-	LGGC01	379	1989	1989	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445156	GCA_001509275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/275/GCA_001509275.1_ASM150927v1	26787827	-
Atribacteria bacterium 34_128	1635291	PRJNA278302	278302	unclassified Bacteria	Bacteria candidate phyla	0.894916	33.6	-	LGGA01	86	837	837	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445154	GCA_001509285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/285/GCA_001509285.1_ASM150928v1	26787827	-
Marinimicrobia bacterium 46_43	1635280	PRJNA278302	278302	FCB group	Candidatus Marinimicrobia	2.03022	45.9	-	LGGY01	271	1968	1968	1/8/16	1/8/16	Scaffold	Lawrence Berkeley National Lab	SAMN03445179	GCA_001509335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/335/GCA_001509335.1_ASM150933v1	26787827	-
Clostridiales bacterium 38_11	1641393	PRJNA278302	278302	Terrabacteria group	Firmicutes	1.88288	38.4	-	LGGM01	156	1866	1866	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445166	GCA_001509345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/345/GCA_001509345.1_ASM150934v1	26787827	-
Corynebacterium flavescens	28028	PRJNA242338	242338	Terrabacteria group	Actinobacteria	2.75865	59.9	chromosome:NZ_CP009246.1/CP009246.1	-	1	2537	2391	1/10/17	4/17/17	Complete Genome	Bielefeld University	SAMN02996497	GCA_001941465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/465/GCA_001941465.1_ASM194146v1	-	OJ8
Actinoplanes awajinensis subsp. mycoplanecinus	135947	PRJNA238534	238534	Terrabacteria group	Actinobacteria	11.3927	71.1	-	LLZH01	353	10170	9712	1/8/16	4/17/17	Contig	University of Illinois	SAMN03327478	GCA_001509495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/495/GCA_001509495.1_ASM150949v1	-	NRRL B-16712
Streptomyces regalis	68262	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.9543	70.2	-	LLZG01	424	10039	9087	1/8/16	3/12/17	Contig	University of Illinois	SAMN03327473	GCA_001509475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/475/GCA_001509475.1_ASM150947v1	-	NRRL 3151
Pseudoruegeria sp. SK021	1933035	PRJNA360595	360595	Proteobacteria	Alphaproteobacteria	3.96681	60.2	-	MTBG01	189	3758	3530	4/28/17	5/22/17	Contig	"University of Oldenburg, Insitute for Chemistry and Biology of the Marine Environment (ICBM)"	SAMN06212649	GCA_002119405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/405/GCA_002119405.1_ASM211940v1	-	SK021
Mesorhizobium erdmanii USDA 3471	1040983	PRJNA165327	165327	Proteobacteria	Alphaproteobacteria	7.02307	62.6	-	AXAE01	50	6789	6442	9/30/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441124	GCA_000472705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/705/GCA_000472705.1_ASM47270v1	-	USDA 3471
Citrobacter pasteurii	1563222	PRJEB7595	269033	Proteobacteria	Gammaproteobacteria	4.98662	51.8	-	CDHL01	56	4957	4677	12/4/14	4/10/17	Contig	INSTITUT PASTEUR	SAMEA3099656	GCA_000826205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/205/GCA_000826205.1_Citrobacter_pasteurii_55-13	-	CIP 55.13
Alphaproteobacteria bacterium casp-alpha1	1655505	PRJNA279271	279271	Proteobacteria	Alphaproteobacteria	3.33646	31.3	-	LFEM01	213	-	-	12/31/15	12/31/15	Contig	University of Tehran	SAMN03658264	GCA_001510035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/035/GCA_001510035.1_ASM151003v1	-	-
Alphaproteobacteria bacterium casp-alpha5	1656908	PRJNA279271	279271	Proteobacteria	Alphaproteobacteria	0.358781	67.2	-	LFEQ01	26	-	-	12/31/15	12/31/15	Contig	University of Tehran	SAMN03702586	GCA_001510065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/065/GCA_001510065.1_ASM151006v1	-	-
Alphaproteobacteria bacterium casp-alpha4	1656907	PRJNA279271	279271	Proteobacteria	Alphaproteobacteria	0.380761	62.9	-	LFEP01	27	-	-	12/31/15	12/31/15	Contig	University of Tehran	SAMN03702583	GCA_001510055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/055/GCA_001510055.1_ASM151005v1	-	-
Alphaproteobacteria bacterium casp-alpha2	1655503	PRJNA279271	279271	Proteobacteria	Alphaproteobacteria	1.77218	58.2	-	LFEN01	84	-	-	12/31/15	12/31/15	Contig	University of Tehran	SAMN03699769	GCA_001510075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/075/GCA_001510075.1_ASM151007v1	-	-
Alphaproteobacteria bacterium casp-alpha3	1656906	PRJNA279271	279271	Proteobacteria	Alphaproteobacteria	1.24444	61.9	-	LFEO01	81	-	-	12/31/15	12/31/15	Contig	University of Tehran	SAMN03702531	GCA_001510085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/085/GCA_001510085.1_ASM151008v1	-	-
Alphaproteobacteria bacterium casp-alpha7	1656910	PRJNA279271	279271	Proteobacteria	Alphaproteobacteria	1.11806	56.7	-	LFES01	50	-	-	12/31/15	12/31/15	Contig	University of Tehran	SAMN03702589	GCA_001510145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/145/GCA_001510145.1_ASM151014v1	-	-
Alphaproteobacteria bacterium casp-alpha6	1656909	PRJNA279271	279271	Proteobacteria	Alphaproteobacteria	2.98001	49.7	-	LFER01	68	-	-	12/31/15	12/31/15	Contig	University of Tehran	SAMN03702588	GCA_001510135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/135/GCA_001510135.1_ASM151013v1	-	-
Alphaproteobacteria bacterium casp-alpha9	1658455	PRJNA279271	279271	Proteobacteria	Alphaproteobacteria	2.1982	47.6	-	LFEU01	85	-	-	12/31/15	12/31/15	Contig	University of Tehran	SAMN03703415	GCA_001510185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/185/GCA_001510185.1_ASM151018v1	-	-
Alphaproteobacteria bacterium casp-alpha8	1658454	PRJNA279271	279271	Proteobacteria	Alphaproteobacteria	1.75583	52.1	-	LFET01	39	-	-	12/31/15	12/31/15	Contig	University of Tehran	SAMN03703414	GCA_001510165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/165/GCA_001510165.1_ASM151016v1	-	-
Alphaproteobacteria bacterium casp-alpha10	1658456	PRJNA279271	279271	Proteobacteria	Alphaproteobacteria	3.35182	50.8	-	LFEV01	85	-	-	12/31/15	12/31/15	Contig	University of Tehran	SAMN03703423	GCA_001510215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/215/GCA_001510215.1_ASM151021v1	-	-
Thaumarchaeota archaeon casp-thauma1	1661711	PRJNA279271	279271	TACK group	Thaumarchaeota	1.041	30.3	-	LFEW01	29	-	-	12/31/15	12/31/15	Contig	University of Tehran	SAMN03733542	GCA_001510225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/225/GCA_001510225.1_ASM151022v1	-	-
Thaumarchaeota archaeon casp-thauma3	1661713	PRJNA279271	279271	TACK group	Thaumarchaeota	1.22116	32.8	-	LFEY01	31	-	-	12/31/15	12/31/15	Contig	University of Tehran	SAMN03733545	GCA_001510275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/275/GCA_001510275.1_ASM151027v1	-	-
Thaumarchaeota archaeon casp-thauma4	1661714	PRJNA279271	279271	TACK group	Thaumarchaeota	0.661324	32.5	-	LFEZ01	25	-	-	12/31/15	12/31/15	Contig	University of Tehran	SAMN03733546	GCA_001510295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/295/GCA_001510295.1_ASM151029v1	-	-
Actinobacteria bacterium casp-actino1	1661698	PRJNA279271	279271	Terrabacteria group	Actinobacteria	2.52183	44.3	-	LFFA01	94	-	-	12/31/15	12/31/15	Contig	University of Tehran	SAMN03733472	GCA_001510305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/305/GCA_001510305.1_ASM151030v1	-	-
Actinobacteria bacterium casp-actino2	1661699	PRJNA279271	279271	Terrabacteria group	Actinobacteria	1.57097	52.7	-	LFFB01	82	-	-	12/31/15	12/31/15	Contig	University of Tehran	SAMN03733504	GCA_001510335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/335/GCA_001510335.1_ASM151033v1	-	-
Actinobacteria bacterium casp-actino3	1661700	PRJNA279271	279271	Terrabacteria group	Actinobacteria	0.43581	59.4	-	LFFC01	25	-	-	12/31/15	12/31/15	Contig	University of Tehran	SAMN03733531	GCA_001510355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/355/GCA_001510355.1_ASM151035v1	-	-
Actinobacteria bacterium casp-actino5	1661702	PRJNA279271	279271	Terrabacteria group	Actinobacteria	1.8979	55.9	-	LFFE01	32	-	-	12/31/15	12/31/15	Contig	University of Tehran	SAMN03733534	GCA_001510385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/385/GCA_001510385.1_ASM151038v1	-	-
Actinobacteria bacterium casp-actino4	1661701	PRJNA279271	279271	Terrabacteria group	Actinobacteria	0.472696	51.1	-	LFFD01	30	-	-	12/31/15	12/31/15	Contig	University of Tehran	SAMN03733532	GCA_001510375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/375/GCA_001510375.1_ASM151037v1	-	-
Actinobacteria bacterium casp-actino6	1661703	PRJNA279271	279271	Terrabacteria group	Actinobacteria	2.04761	67.6	-	LFFF01	119	-	-	12/31/15	12/31/15	Contig	University of Tehran	SAMN03733535	GCA_001510415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/415/GCA_001510415.1_ASM151041v1	-	-
Actinobacteria bacterium casp-actino7	1661704	PRJNA279271	279271	Terrabacteria group	Actinobacteria	0.305524	66.8	-	LFFG01	17	-	-	12/31/15	12/31/15	Contig	University of Tehran	SAMN03733536	GCA_001510435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/435/GCA_001510435.1_ASM151043v1	-	-
Actinobacteria bacterium casp-actino8	1661705	PRJNA279271	279271	Terrabacteria group	Actinobacteria	1.00698	63	-	LFFH01	51	-	-	12/31/15	12/31/15	Contig	University of Tehran	SAMN03733537	GCA_001510455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/455/GCA_001510455.1_ASM151045v1	-	-
Actinobacteria bacterium casp-actino10	1661707	PRJNA279271	279271	Terrabacteria group	Actinobacteria	0.244964	53.7	-	LFFJ01	16	-	-	12/31/15	12/31/15	Contig	University of Tehran	SAMN03733539	GCA_001510485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/485/GCA_001510485.1_ASM151048v1	-	-
Actinobacteria bacterium casp-actino9	1661706	PRJNA279271	279271	Terrabacteria group	Actinobacteria	5.67122	63.4	-	LFFI01	155	-	-	12/31/15	12/31/15	Contig	University of Tehran	SAMN03733538	GCA_001510475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/475/GCA_001510475.1_ASM151047v1	-	-
Actinobacteria bacterium casp-actino11	1661708	PRJNA279271	279271	Terrabacteria group	Actinobacteria	0.261329	52.6	-	LFFK01	15	-	-	12/31/15	12/31/15	Contig	University of Tehran	SAMN03733540	GCA_001510515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/515/GCA_001510515.1_ASM151051v1	-	-
Actinobacteria bacterium casp-actino12	1661709	PRJNA279271	279271	Terrabacteria group	Actinobacteria	2.12584	31.2	-	LFFL01	85	-	-	12/31/15	12/31/15	Contig	University of Tehran	SAMN03733541	GCA_001510535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/535/GCA_001510535.1_ASM151053v1	-	-
Fictibacillus sp. FJAT-27399	1729689	PRJNA299752	299752	Terrabacteria group	Firmicutes	4.50364	43.2	-	LMVC01	13	4618	4427	1/11/16	4/11/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04102799	GCA_001510655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/655/GCA_001510655.1_ASM151065v1	-	FJAT-27399
Sphingomonas endophytica	869719	PRJNA278221	278221	Proteobacteria	Alphaproteobacteria	3.64165	67.8	-	LDTB01	330	3361	3182	12/22/15	4/16/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401386	GCA_001476895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/895/GCA_001476895.1_ASM147689v1	26793183	NS334
Paenibacillus jamilae	114136	PRJNA278202	278202	Terrabacteria group	Firmicutes	5.58665	45.6	-	LDRX01	311	4996	4693	12/22/15	4/11/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401367	GCA_001477135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/135/GCA_001477135.1_ASM147713v1	26793183	NS115
Acidihalobacter prosperus	160660	PRJNA344521	344521	Proteobacteria	Gammaproteobacteria	3.56694	59.9	chromosome:NZ_CP017415.1/CP017415.1	-	1	3443	3222	10/6/16	4/13/17	Complete Genome	Curtin University	SAMN05828143	GCA_001753245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/245/GCA_001753245.1_ASM175324v1	-	F5
Clostridiaceae bacterium DTU054	1671643	PRJNA283298	283298	Terrabacteria group	Firmicutes	2.24735	47.6	-	LFRR01	110	-	-	1/12/16	1/12/16	Scaffold	Technical University of Denmark	SAMN03778951	GCA_001512425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/425/GCA_001512425.1_ASM151242v1	-	-
Halothermothrix sp. DTU029	1671624	PRJNA283298	283298	Terrabacteria group	Firmicutes	1.95033	40.2	-	LFRS01	187	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03778950	GCA_001512435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/435/GCA_001512435.1_ASM151243v1	26839589	-
Clostridiaceae bacterium DTU079	1671645	PRJNA283298	283298	Terrabacteria group	Firmicutes	3.1069	38.1	-	LFSC01	67	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03776770	GCA_001512505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/505/GCA_001512505.1_ASM151250v1	26839589	-
Clostridia bacterium DTU065	1671641	PRJNA283298	283298	Terrabacteria group	Firmicutes	2.20471	48.7	-	LFSI01	95	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03777436	GCA_001512545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/545/GCA_001512545.1_ASM151254v1	26839589	-
Clostridiaceae bacterium DTU059	1671644	PRJNA283298	283298	Terrabacteria group	Firmicutes	2.1527	46.9	-	LFSK01	215	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03779019	GCA_001512555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/555/GCA_001512555.1_ASM151255v1	26839589	-
Clostridia bacterium DTU014	1671636	PRJNA283298	283298	Terrabacteria group	Firmicutes	2.26639	53.5	-	LFSU01	93	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03777429	GCA_001512605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/605/GCA_001512605.1_ASM151260v1	26839589	-
Clostridiales bacterium DTU036	1671651	PRJNA283298	283298	Terrabacteria group	Firmicutes	1.40735	41.2	-	LFTD01	130	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03779022	GCA_001512625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/625/GCA_001512625.1_ASM151262v1	26839589	-
Clostridiales bacterium DTU073	1671657	PRJNA283298	283298	Terrabacteria group	Firmicutes	1.66998	38.5	-	LFSF01	52	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03776771	GCA_001512665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/665/GCA_001512665.1_ASM151266v1	26839589	-
Clostridiales bacterium DTU072	1671656	PRJNA283298	283298	Terrabacteria group	Firmicutes	1.60716	43.5	-	LFSG01	63	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03776843	GCA_001512685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/685/GCA_001512685.1_ASM151268v1	26839589	-
Clostridiales bacterium DTU058	1671653	PRJNA283298	283298	Terrabacteria group	Firmicutes	2.85354	34.7	-	LFSL01	169	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03777438	GCA_001512725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/725/GCA_001512725.1_ASM151272v1	26839589	-
Clostridiales bacterium DTU032	1671650	PRJNA283298	283298	Terrabacteria group	Firmicutes	1.61273	46.4	-	LFSM01	125	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03778991	GCA_001512745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/745/GCA_001512745.1_ASM151274v1	26839589	-
Clostridiales bacterium DTU053	1671652	PRJNA283298	283298	Terrabacteria group	Firmicutes	1.90128	47.6	-	LFSO01	56	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03777428	GCA_001512765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/765/GCA_001512765.1_ASM151276v1	26839589	-
Clostridiales bacterium DTU013	1671648	PRJNA283298	283298	Terrabacteria group	Firmicutes	2.13006	52.6	-	LFSV01	196	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03779020	GCA_001512805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/805/GCA_001512805.1_ASM151280v1	26839589	-
Clostridiales bacterium DTU010	1671646	PRJNA283298	283298	Terrabacteria group	Firmicutes	2.06764	59.1	-	LFSX01	156	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03779015	GCA_001512825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/825/GCA_001512825.1_ASM151282v1	26839589	-
Clostridia bacterium DTU022	1671638	PRJNA283298	283298	Terrabacteria group	Firmicutes	1.98312	58.4	-	LFRQ01	131	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03778952	GCA_001512835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/835/GCA_001512835.1_ASM151283v1	26839589	-
Rikenellaceae bacterium DTU002	1671665	PRJNA283298	283298	FCB group	Bacteroidetes/Chlorobi group	1.90532	49.9	-	LFSY01	146	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03779008	GCA_001512865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/865/GCA_001512865.1_ASM151286v1	26839589	-
Rikenellaceae bacterium DTU001	1671664	PRJNA283298	283298	FCB group	Bacteroidetes/Chlorobi group	1.90526	28.9	-	LFSZ01	117	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03779016	GCA_001512885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/885/GCA_001512885.1_ASM151288v1	26839589	-
Clostridia bacterium DTU084	1671642	PRJNA283298	283298	Terrabacteria group	Firmicutes	1.86014	50.9	-	LFTB01	144	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03779014	GCA_001512905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/905/GCA_001512905.1_ASM151290v1	26839589	-
Clostridiales bacterium DTU083	1671660	PRJNA283298	283298	Terrabacteria group	Firmicutes	1.89946	43.4	-	LFTC01	84	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03777437	GCA_001512915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/915/GCA_001512915.1_ASM151291v1	26839589	-
Clostridiales bacterium DTU023	1671649	PRJNA283298	283298	Terrabacteria group	Firmicutes	1.39518	49.3	-	LFTF01	132	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03778992	GCA_001512945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/945/GCA_001512945.1_ASM151294v1	26839589	-
Methanomicrobia archaeon DTU008	1675034	PRJNA283298	283298	Euryarchaeota	Methanomicrobia	1.76231	58.8	-	LFRW01	59	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03787326	GCA_001512965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/965/GCA_001512965.1_ASM151296v1	26839589	-
Acholeplasmatales bacterium DTU056	1671633	PRJNA283298	283298	Terrabacteria group	Tenericutes	1.20785	30	-	LFRX01	59	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03776757	GCA_001512985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/985/GCA_001512985.1_ASM151298v1	26839589	-
Gammaproteobacteria bacterium DTU037	1671662	PRJNA283298	283298	Proteobacteria	Gammaproteobacteria	2.83001	49.4	-	LFRZ01	160	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03776769	GCA_001513025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/025/GCA_001513025.1_ASM151302v1	26839589	-
Clostridiales bacterium DTU089	1671661	PRJNA283298	283298	Terrabacteria group	Firmicutes	2.45081	48.6	-	LFSB01	59	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03777430	GCA_001513045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/045/GCA_001513045.1_ASM151304v1	26839589	-
Clostridiales bacterium DTU075	1671659	PRJNA283298	283298	Terrabacteria group	Firmicutes	2.03564	42.4	-	LFSD01	142	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03779018	GCA_001513065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/065/GCA_001513065.1_ASM151306v1	26839589	-
Clostridiales bacterium DTU074	1671658	PRJNA283298	283298	Terrabacteria group	Firmicutes	2.55688	43.7	-	LFSE01	138	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03778993	GCA_001513075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/075/GCA_001513075.1_ASM151307v1	26839589	-
Clostridiales bacterium DTU070	1671655	PRJNA283298	283298	Terrabacteria group	Firmicutes	2.88823	43.7	-	LFSH01	107	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03776849	GCA_001513105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/105/GCA_001513105.1_ASM151310v1	26839589	-
Clostridia bacterium DTU030	1671640	PRJNA283298	283298	Terrabacteria group	Firmicutes	1.81127	55.7	-	LFSN01	144	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03778954	GCA_001513125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/125/GCA_001513125.1_ASM151312v1	26839589	-
Clostridia bacterium DTU025	1671639	PRJNA283298	283298	Terrabacteria group	Firmicutes	2.00556	63.6	-	LFSP01	52	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03777414	GCA_001513145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/145/GCA_001513145.1_ASM151314v1	26839589	-
Clostridia bacterium DTU015	1671637	PRJNA283298	283298	Terrabacteria group	Firmicutes	1.73514	53.3	-	LFST01	61	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03777427	GCA_001513185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/185/GCA_001513185.1_ASM151318v1	26839589	-
Clostridiales bacterium DTU012	1671647	PRJNA283298	283298	Terrabacteria group	Firmicutes	2.12497	53.8	-	LFSW01	98	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03777431	GCA_001513205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/205/GCA_001513205.1_ASM151320v1	26839589	-
Alcaligenaceae bacterium DTU041	1671635	PRJNA283298	283298	Proteobacteria	Betaproteobacteria	2.89746	49.5	-	LFTA01	252	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03779021	GCA_001513225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/225/GCA_001513225.1_ASM151322v1	26839589	-
Peptococcaceae bacterium DTU027	1671663	PRJNA283298	283298	Terrabacteria group	Firmicutes	2.1431	49.2	-	LFTE01	177	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03779017	GCA_001513245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/245/GCA_001513245.1_ASM151324v1	26839589	-
Clostridiales bacterium DTU035	1676154	PRJNA283298	283298	Terrabacteria group	Firmicutes	1.51214	39.3	-	LFTG01	229	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03794751	GCA_001513255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/255/GCA_001513255.1_ASM151325v1	26839589	-
Rikenellaceae bacterium DTU049	1676150	PRJNA283298	283298	FCB group	Bacteroidetes/Chlorobi group	1.54093	29.5	-	LFTI01	104	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03794740	GCA_001513285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/285/GCA_001513285.1_ASM151328v1	26839589	-
Clostridiales bacterium DTU078	1676156	PRJNA283298	283298	Terrabacteria group	Firmicutes	2.16812	52.9	-	LFTJ01	239	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03794753	GCA_001513305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/305/GCA_001513305.1_ASM151330v1	26839589	-
Thermotogaceae bacterium DTU111	1676151	PRJNA283298	283298	Thermotogae	Thermotogae	1.44583	31	-	LFTL01	149	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03794760	GCA_001513315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/315/GCA_001513315.1_ASM151331v1	26839589	-
Clostridiales bacterium DTU086	1676157	PRJNA283298	283298	Terrabacteria group	Firmicutes	2.09688	45.4	-	LFTO01	243	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03794755	GCA_001513335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/335/GCA_001513335.1_ASM151333v1	26839589	-
Clostridiales bacterium DTU033	1676153	PRJNA283298	283298	Terrabacteria group	Firmicutes	1.47524	52.5	-	LFTH01	141	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03794748	GCA_001513365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/365/GCA_001513365.1_ASM151336v1	26839589	-
Clostridiales bacterium DTU064	1676155	PRJNA283298	283298	Terrabacteria group	Firmicutes	1.88599	45.2	-	LFTK01	152	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03794752	GCA_001513385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/385/GCA_001513385.1_ASM151338v1	26839589	-
Clostridia bacterium DTU080	1676162	PRJNA283298	283298	Terrabacteria group	Firmicutes	3.0908	56.2	-	LFTP01	381	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03794754	GCA_001513395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/395/GCA_001513395.1_ASM151339v1	26839589	-
Clostridiales bacterium DTU024	1676160	PRJNA283298	283298	Terrabacteria group	Firmicutes	2.48754	54.2	-	LFTR01	277	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03794761	GCA_001513425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/425/GCA_001513425.1_ASM151342v1	26839589	-
Gammaproteobacteria bacterium DTU040	1676152	PRJNA283298	283298	Proteobacteria	Gammaproteobacteria	2.19959	48.9	-	LFTS01	311	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03794759	GCA_001513435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/435/GCA_001513435.1_ASM151343v1	26839589	-
Clostridiales bacterium DTU087	1676158	PRJNA283298	283298	Terrabacteria group	Firmicutes	2.19638	54.8	-	LFTN01	233	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03794756	GCA_001513495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/495/GCA_001513495.1_ASM151349v1	26839589	-
Clostridiales bacterium DTU092	1676159	PRJNA283298	283298	Terrabacteria group	Firmicutes	2.08601	41.7	-	LFTM01	329	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03794757	GCA_001513505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/505/GCA_001513505.1_ASM151350v1	26839589	-
Clostridia bacterium DTU068	1676163	PRJNA283298	283298	Terrabacteria group	Firmicutes	2.19665	45.6	-	LFTQ01	222	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03794763	GCA_001513545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/545/GCA_001513545.1_ASM151354v1	26839589	-
Methanosarcina flavescens	1715806	PRJNA295508	295508	Euryarchaeota	Methanomicrobia	3.26809	41.3	-	LKAZ01	74	2870	2652	9/30/15	4/11/17	Contig	BioPara	SAMN04074913	GCA_001304615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/615/GCA_001304615.1_ASM130461v1	-	E03.2
Limnohabitans sp. 63ED37-2	1678128	PRJNA282432	282432	Proteobacteria	Betaproteobacteria	3.37299	59.9	chromosome:NZ_CP011774.1/CP011774.1	-	1	3239	3152	10/26/15	4/11/17	Complete Genome	Chungnam National University	SAMN03569611	GCA_001412535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/535/GCA_001412535.1_ASM141253v1	-	63ED37-2
Streptomyces curacoi	146536	PRJNA299217	299217	Terrabacteria group	Actinobacteria	8.41225	71	-	LMWJ01	31	7513	7140	1/13/16	3/12/17	Scaffold	Bielefeld University	SAMN04193339	GCA_001513975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/975/GCA_001513975.1_ASM151397v1	-	DSM 40107
Streptomyces phaeopurpureus	67340	PRJNA299218	299218	Terrabacteria group	Actinobacteria	9.55596	70.9	-	LMWK01	30	8531	8167	1/13/16	3/12/17	Scaffold	Bielefeld University	SAMN04193340	GCA_001513985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/985/GCA_001513985.1_ASM151398v1	-	DSM 40125
Streptomyces pseudovenezuelae	67350	PRJNA299220	299220	Terrabacteria group	Actinobacteria	9.63974	71	-	LMWM01	32	8629	8241	1/13/16	3/12/17	Scaffold	Bielefeld University	SAMN04193342	GCA_001513955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/955/GCA_001513955.1_ASM151395v1	-	DSM 40212
Streptomyces cellostaticus	67285	PRJNA299219	299219	Terrabacteria group	Actinobacteria	9.83528	70.9	-	LMWL01	129	8677	8101	1/13/16	3/12/17	Scaffold	Bielefeld University	SAMN04193341	GCA_001513965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/965/GCA_001513965.1_ASM151396v1	-	DSM 40189
Streptomyces ciscaucasicus	66877	PRJNA299222	299222	Terrabacteria group	Actinobacteria	9.84412	70.2	-	LMWO01	47	8932	8471	1/13/16	3/14/17	Scaffold	Bielefeld University	SAMN04193344	GCA_001514045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/045/GCA_001514045.1_ASM151404v1	-	DSM 40275
Streptomyces corchorusii	1903	PRJNA299223	299223	Terrabacteria group	Actinobacteria	10.3095	72	-	LMWP01	71	9359	8744	1/13/16	3/12/17	Scaffold	Bielefeld University	SAMN04193345	GCA_001514055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/055/GCA_001514055.1_ASM151405v1	-	DSM 40340
Streptomyces yokosukanensis	67386	PRJNA299221	299221	Terrabacteria group	Actinobacteria	10.1593	71.1	-	LMWN01	98	9024	8472	1/13/16	3/12/17	Scaffold	Bielefeld University	SAMN04193343	GCA_001514035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/035/GCA_001514035.1_ASM151403v1	-	DSM 40224
Streptomyces olivochromogenes	1963	PRJNA299225	299225	Terrabacteria group	Actinobacteria	11.6693	70.1	-	LMWR01	98	10612	9859	1/13/16	3/12/17	Scaffold	Bielefeld University	SAMN04193347	GCA_001514115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/115/GCA_001514115.1_ASM151411v1	-	DSM 40451
Clostridiales bacterium DTU069	1671654	PRJNA283298	283298	Terrabacteria group	Firmicutes	2.55411	42.2	-	LFRV01	130	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03777541	GCA_001512485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/485/GCA_001512485.1_ASM151248v1	26839589	-
Syntrophothermus sp. DTU052	1671631	PRJNA283298	283298	Terrabacteria group	Firmicutes	2.2821	51.3	-	LFRU01	114	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03778948	GCA_001512495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/495/GCA_001512495.1_ASM151249v1	26839589	-
Streptomyces longwoodensis	68231	PRJNA299227	299227	Terrabacteria group	Actinobacteria	8.36362	73	-	LMWS01	32	7403	7049	1/13/16	3/12/17	Scaffold	Bielefeld University	SAMN04193348	GCA_001514125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/125/GCA_001514125.1_ASM151412v1	-	DSM 41677
Streptomyces griseorubiginosus	67304	PRJNA299230	299230	Terrabacteria group	Actinobacteria	9.86675	70.9	-	LMWV01	29	8779	8332	1/13/16	3/12/17	Scaffold	Bielefeld University	SAMN04193351	GCA_001514195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/195/GCA_001514195.1_ASM151419v1	-	DSM 40469
Streptomyces bungoensis	285568	PRJNA299233	299233	Terrabacteria group	Actinobacteria	8.40898	72.5	-	LMWX01	73	7463	7052	1/13/16	3/12/17	Scaffold	Bielefeld University	SAMN04193354	GCA_001514215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/215/GCA_001514215.1_ASM151421v1	-	DSM 41781
Streptomyces caeruleatus	661399	PRJNA299234	299234	Terrabacteria group	Actinobacteria	10.2905	70.7	-	LMWY01	64	9060	8455	1/13/16	3/12/17	Scaffold	Bielefeld University	SAMN04193355	GCA_001514235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/235/GCA_001514235.1_ASM151423v1	-	NRRL B-24802
Paenibacillus pabuli NBRC 13638	1349782	PRJDB1367	231423	Terrabacteria group	Firmicutes	7.32906	46.5	-	BCNM01	63	6456	6283	1/6/16	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00034166	GCA_001514495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/495/GCA_001514495.1_ASM151449v1	-	NBRC 13638
Hadesarchaea archaeon DG-33	1775754	PRJNA270657	270657	Euryarchaeota	Hadesarchaea	0.786381	50.5	-	LQHI01	77	950	862	1/14/16	1/14/16	Scaffold	University of Texas	SAMN04385803	GCA_001515185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/185/GCA_001515185.1_DG-33	27572167	-
Hadesarchaea archaeon YNP_45	1776334	PRJNA298487	298487	Euryarchaeota	Hadesarchaea	1.23113	54.8	-	LQMQ01	64	1367	1281	1/14/16	1/14/16	Contig	Univ of Texas Austin	SAMN04159681	GCA_001515205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/205/GCA_001515205.2_ASM151520v2	27572167	-
Hadesarchaea archaeon DG-33-1	1775755	PRJNA270657	270657	Euryarchaeota	Hadesarchaea	0.928769	51.2	-	LQHJ01	53	1051	951	1/14/16	1/14/16	Scaffold	University of Texas	SAMN04385804	GCA_001515195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/195/GCA_001515195.1_DG-33-1	27572167	-
Hadesarchaea archaeon YNP_N21	1776333	PRJNA298487	298487	Euryarchaeota	Hadesarchaea	1.2062	48.7	-	LQMP01	36	1304	1238	1/14/16	1/14/16	Contig	Univ of Texas Austin	SAMN04159680	GCA_001515215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/215/GCA_001515215.1_metagenomics_assembly	27572167	-
Candidatus Dichloromethanomonas elyunquensis	1755312	PRJNA300724	300724	Terrabacteria group	Firmicutes	2.07642	43	-	LNDB01	53	-	-	1/14/16	4/5/16	Contig	University of Tuebingen	SAMN04235649	GCA_001515265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/265/GCA_001515265.1_ASM151526v1	26941136	-
Aquitalea pelogenes	1293573	PRJNA302577	302577	Proteobacteria	Betaproteobacteria	4.39082	59.5	-	LNQV01	183	4121	3694	1/15/16	4/11/17	Contig	Masaryk University	SAMN04275152	GCA_001515305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/305/GCA_001515305.1_ASM151530v1	26637813	CCM 7557
Caldivirga sp. MU80	1650354	PRJNA282926	282926	TACK group	Crenarchaeota	2.26047	48.5	-	LCTF01	86	2315	2161	6/15/16	4/17/17	Contig	University of Cincinnati	SAMN03580834	GCA_001663375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/375/GCA_001663375.1_ASM166337v1	-	MU80
Desulfitibacter sp. BRH_c19	1734395	PRJNA257561	257561	Terrabacteria group	Firmicutes	3.85358	36.1	-	LOER01	48	3680	3521	1/15/16	1/15/16	Contig	EPFL	SAMN04126953	GCA_001515945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/945/GCA_001515945.1_41k	-	-
Clostridia bacterium BRH_c25	1734399	PRJNA257561	257561	Terrabacteria group	Firmicutes	5.20385	40.8	-	LOES01	257	4974	4629	1/15/16	1/15/16	Contig	EPFL	SAMN04126954	GCA_001515955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/955/GCA_001515955.1_41k	-	-
Sphingomonadales bacterium BRH_c3	1734408	PRJNA257561	257561	Proteobacteria	Alphaproteobacteria	2.50709	60.7	-	LOET01	157	2518	2300	1/15/16	1/15/16	Contig	EPFL	SAMN04126955	GCA_001515985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/985/GCA_001515985.1_41k	-	-
bacterium BRH_c32	1734400	PRJNA257561	257561	unclassified Bacteria	unclassified Bacteria (miscellaneous)	3.48787	34.2	-	LOEU01	43	2912	2812	1/15/16	1/15/16	Contig	EPFL	SAMN04126956	GCA_001516025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/025/GCA_001516025.1_ASM151602v1	-	-
Gracilibacter sp. BRH_c7a	1734398	PRJNA257561	257561	Terrabacteria group	Firmicutes	4.10544	39.5	-	LOEZ01	98	3960	3782	1/15/16	1/15/16	Contig	EPFL	SAMN04126961	GCA_001516055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/055/GCA_001516055.1_41k	-	-
Alphaproteobacteria bacterium BRH_c36	1734406	PRJNA257561	257561	Proteobacteria	Alphaproteobacteria	3.71618	60.4	-	LOEV01	236	3529	3280	1/15/16	1/15/16	Contig	EPFL	SAMN04126957	GCA_001516065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/065/GCA_001516065.1_ASM151606v1	-	-
Sphingomonadales bacterium BRH_c42	1734407	PRJNA257561	257561	Proteobacteria	Alphaproteobacteria	2.18952	62.9	-	LOEX01	147	2242	2031	1/15/16	1/15/16	Contig	EPFL	SAMN04126959	GCA_001516125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/125/GCA_001516125.1_41k	-	-
Pseudomonas trivialis	200450	PRJNA284214	284214	Proteobacteria	Gammaproteobacteria	6.4528	59.9	chromosome:NZ_CP011507.1/CP011507.1	-	1	6028	5810	7/23/15	4/10/17	Complete Genome	CSIR-Institute of Himalayan Bioresource Technology	SAMN03699826	GCA_001186335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/335/GCA_001186335.1_ASM118633v1	26337878	IHBB745
Draconibacterium sediminis	1544798	PRJNA260774	260774	FCB group	Bacteroidetes/Chlorobi group	5.99223	40.9	-	JRHC01	19	4712	4614	3/10/15	4/18/17	Contig	"Third Institute of Oceanography,State Oceanic Administration"	SAMN03031235	GCA_000949475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/475/GCA_000949475.1_ASM94947v1	-	JN14CK-3
Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088	391904	PRJDA32049	32049	Terrabacteria group	Actinobacteria	2.82896	59.9	chromosome:NC_017219.1/AP010889.1	-	1	2675	2443	1/29/11	3/30/17	Complete Genome	"University of Tokyo, Graduate School of Frontier Sciences"	SAMD00060952	GCA_000269965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/965/GCA_000269965.1_ASM26996v1	21270894	JCM 1222
Bifidobacterium longum subsp. longum BBMN68	890402	PRJNA53143	53143	Terrabacteria group	Actinobacteria	2.26594	59.9	chromosome:NC_014656.1/CP002286.1	-	1	1959	1809	11/10/10	3/30/17	Complete Genome	"Key Lab of Functional Dairy Science of Chinese Ministry of Education, College of Food Science and Nutritional Engineering, China Agricultural University"	SAMN02603469	GCA_000166315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/315/GCA_000166315.1_ASM16631v1	21097614	BBMN68
Thermocladium sp. ECH_B	1714261	PRJNA295311	295311	TACK group	Crenarchaeota	1.87695	46.9	-	LOBW01	155	1972	1810	1/15/16	1/15/16	Contig	Montana State University	SAMN04045698	GCA_001516585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/585/GCA_001516585.1_ASM151658v1	-	-
Acidibacillus ferrooxidans	1765683	PRJNA304017	304017	Terrabacteria group	Firmicutes	3.03443	52	-	LSUQ01	98	3045	2890	5/12/16	4/12/17	Contig	Redox	SAMN04505005	GCA_001642725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/725/GCA_001642725.1_ASM164272v1	-	SLC66
Candidatus Omnitrophus magneticus	1609969	PRJNA273957	273957	PVC group	Candidatus Omnitrophica	3.1459	35.8	-	JYNY01	656	3033	2980	3/16/15	3/16/15	Contig	Max Planck Institute for Marine Microbiology	SAMN03316882	GCA_000954095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/954/095/GCA_000954095.1_ASM95409v1	-	-
Halococcus agarilyticus	1232219	PRJDB105	186821	Euryarchaeota	Halobacteria	3.47673	66	-	BAFM01	58	3419	3226	1/17/13	3/22/17	Contig	Japan Agency for Marine-Earth Science and Technology	SAMD00011631	GCA_000334895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/895/GCA_000334895.1_ASM33489v1	-	197A
Defluviitalea phaphyphila	1473580	PRJNA266253	266253	Terrabacteria group	Firmicutes	2.53981	27.7	-	JWID01	76	2463	2306	12/14/15	4/17/17	Scaffold	"Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences"	SAMN03165200	GCA_001466305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/305/GCA_001466305.1_ASM146630v1	26590273	Alg1
Apibacter mensalis	1586267	PRJNA292838	292838	FCB group	Bacteroidetes/Chlorobi group	2.3311	30.5	-	LIVM01	42	2093	1995	10/28/15	4/11/17	Scaffold	Joint Genome Institute	SAMN03992719	GCA_001418685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/685/GCA_001418685.1_ASM141868v1	-	R-53146
Bacillus halotolerans	260554	PRJNA315348	315348	Terrabacteria group	Firmicutes	4.09077	43.9	-	LUUT01	3	4209	3888	5/5/16	9/5/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04544317	GCA_001637525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/525/GCA_001637525.1_ASM163752v1	-	FJAT-2398
Acholeplasmatales bacterium DTU067	1671634	PRJNA283298	283298	Terrabacteria group	Tenericutes	1.46914	47.2	-	LFRT01	91	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03778949	GCA_001512455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/455/GCA_001512455.1_ASM151245v1	26839589	-
Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088	391904	PRJNA17189	17189	Terrabacteria group	Actinobacteria	2.83275	59.9	chromosome:NC_011593.1/CP001095.1	-	1	2673	2438	11/20/08	3/30/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598380	GCA_000020425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/425/GCA_000020425.1_ASM2042v1	19033196	ATCC 15697
Caviibacter abscessus	1766719	PRJNA305231	305231	Fusobacteria	Fusobacteriia	1.21921	26.5	-	LOQG01	40	1195	1122	1/19/16	4/11/17	Contig	Robert Koch Institute	SAMN04320709	GCA_001517835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/835/GCA_001517835.1_ASM151783v1	-	CCUG 39713
Sneathia sanguinegens	40543	PRJNA305231	305231	Fusobacteria	Fusobacteriia	1.29102	26.7	-	LOQF01	32	1260	1180	1/19/16	4/16/17	Contig	Robert Koch Institute	SAMN04320708	GCA_001517935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/935/GCA_001517935.1_ASM151793v1	-	CCUG41628
Thermobifida cellulosilytica TB100	665004	PRJNA289053	289053	Terrabacteria group	Actinobacteria	4.43037	71.5	-	LGEM01	19	3913	3626	1/19/16	4/17/17	Scaffold	Seqomics Ltd	SAMN03840822	GCA_001517975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/975/GCA_001517975.1_ASM151797v1	-	TB100
Rhodobacteraceae bacterium O3.65	1768241	PRJNA305382	305382	Proteobacteria	Alphaproteobacteria	4.86208	61.5	-	LPUY01	139	4623	4433	1/19/16	4/11/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04324894	GCA_001518015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/015/GCA_001518015.1_ASM151801v1	-	O3.65
Pyrobaculum neutrophilum V24Sta	444157	PRJNA15645	15645	TACK group	Crenarchaeota	1.76982	59.9	chromosome:CP001014.1	-	1	2053	1966	3/27/08	8/25/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598332	GCA_000019805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/805/GCA_000019805.1_ASM1980v1	-	V24Sta
Novosphingobium fuchskuhlense	1117702	PRJNA299317	299317	Proteobacteria	Alphaproteobacteria	3.96841	65.3	-	LLZS01	7	3621	3533	1/20/16	4/11/17	Scaffold	Bielefeld University	SAMN04193360	GCA_001519075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/075/GCA_001519075.1_ASM151907v1	-	FNE08-7
Syntrophobacter fumaroxidans MPOB	335543	PRJNA13013	13013	Proteobacteria	delta/epsilon subdivisions	4.99025	59.9	chromosome:NC_008554.1/CP000478.1	-	1	4223	4134	10/26/06	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598285	GCA_000014965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/965/GCA_000014965.1_ASM1496v1	-	MPOB
Agrobacterium radiobacter K84	311403	PRJNA13402	13402	Proteobacteria	Alphaproteobacteria	7.2733	59.8671	chromosome 1:NC_011985.1/CP000628.1; chromosome 2:NC_011983.1/CP000629.1; plasmid pAgK84:NC_011994.1/CP000632.1; plasmid pAtK84b:NC_011990.1/CP000630.1; plasmid pAtK84c:NC_011987.1/CP000631.1	-	5	6941	6750	1/27/09	5/18/17	Complete Genome	Agrobacterium consortium	SAMN02602977	GCA_000016265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/265/GCA_000016265.1_ASM1626v1	19251847	K84
Serratia marcescens	615	PRJNA284857	284857	Proteobacteria	Gammaproteobacteria	5.23337	59.8174	chromosome:NZ_CP012685.1/CP012685.1; plasmid pSmUNAM836:NZ_CP012686.1/CP012686.1	-	2	5036	4844	9/18/15	3/26/17	Complete Genome	Universidad Nacional Autonoma de Mexico	SAMN03733572	GCA_001294565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/565/GCA_001294565.1_ASM129456v1	26798087	SmUNAM836
Bifidobacterium longum subsp. longum KACC 91563	1035817	PRJNA66401	66401	Terrabacteria group	Actinobacteria	2.39576	59.8115	chromosome:NC_017221.1/CP002794.1; plasmid BLNIAS_P1:NC_017220.1/CP002795.1; plasmid BLNIAS_P2:NC_017222.1/CP002796.1	-	3	2064	1906	6/28/11	3/30/17	Complete Genome	"National Livestock Research Institute, RDA"	SAMN02603656	GCA_000219455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/455/GCA_000219455.1_ASM21945v1	21742881	KACC 91563
Burkholderia anthina	179879	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.27305	67.2174	chromosome 1:NZ_CM003768.1/CM003768.1; chromosome 3:NZ_CM003769.1/CM003769.1	LNJP01	4	6732	6357	2/2/16	4/5/17	Chromosome	Northern Arizona University	SAMN03449213	GCA_001547525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/525/GCA_001547525.1_ASM154752v1	-	AZ-4-2-10-S1-D7
Phaeobacter inhibens 2.10	383629	PRJNA19353	19353	Proteobacteria	Alphaproteobacteria	4.16092	59.8003	chromosome:NC_018286.1/CP002972.1; plasmid pPGA2_239:NC_018421.1/CP002973.1; plasmid pPGA2_71:NC_018422.1/CP002975.1; plasmid pPGA2_95:NC_018423.1/CP002974.1	-	4	3912	3810	7/31/12	9/4/17	Complete Genome	Moore Foundation	SAMN02603622	GCA_000154745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/745/GCA_000154745.2_ASM15474v2	22717884	2.1
Candidatus Chrysopegis kryptomonas	1633643	PRJEB11725	301874	FCB group	Candidatus Kryptonia	2.07011	36.4	-	CZVW01	43	1955	1843	11/11/15	7/29/17	Scaffold	DOE - Joint Genome Institute	SAMN03436147	GCA_001536065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/065/GCA_001536065.1_JGI_assembly	-	JGI-23
Candidatus Kryptonium thompsoni	1633631	PRJEB11788	302419	FCB group	Candidatus Kryptonia	2.59269	37.4	-	FAOP01	18	2349	2274	11/18/15	4/11/17	Contig	DOE - Joint Genome Institute	SAMN03436306	GCA_001485625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/625/GCA_001485625.1_JGI_assembly	-	-
Elizabethkingia genomosp. 2	1756148	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	4.24771	35.9	-	LNOI01	12	3928	3847	1/21/16	4/11/17	Scaffold	CDC	SAMN04254557	GCA_001521745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/745/GCA_001521745.1_ASM152174v1	26966213	G4071
Asaia bogorensis NBRC 16594	1231624	PRJDB519	298866	Proteobacteria	Alphaproteobacteria	3.19827	59.8	chromosome Unknown:NZ_AP014690.1/AP014690.1	-	1	2835	2727	10/14/15	4/16/17	Complete Genome	Kinki University	SAMD00019081	GCA_001547995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/995/GCA_001547995.1_ASM154799v1	26358298	NBRC 16594
Microtetraspora malaysiensis	161358	PRJDB4051	309148	Terrabacteria group	Actinobacteria	8.82221	70.7	-	BBYJ01	53	8063	7751	1/16/16	4/17/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00035251	GCA_001528665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/665/GCA_001528665.1_ASM152866v1	-	NBRC 100735
Marinobacterium profundum	1714300	PRJDB4474	308297	Proteobacteria	Gammaproteobacteria	5.63774	57.2	-	BCNS01	226	5000	4793	1/15/16	4/11/17	Contig	Korea Polar Research Institute	SAMD00045271	GCA_001528745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/745/GCA_001528745.1_ASM152874v1	-	PAMC 27536
Hyphomicrobium sulfonivorans	121290	PRJNA298504	298504	Proteobacteria	Alphaproteobacteria	3.70362	61.1	-	LMTR01	98	3368	3238	1/26/16	4/16/17	Scaffold	KU Leuven	SAMN04159840	GCA_001541235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/235/GCA_001541235.1_ASM154123v1	-	WDL6
Nitrospirae bacterium HCH-1	1748249	PRJNA300727	300727	Nitrospirae	unclassified Nitrospirae	3.59327	45.4	-	LNQR01	152	3381	3253	1/26/16	4/21/17	Contig	"Institute of Geology and Geophysics, Chinese Academy of Sciences"	SAMN04229298	GCA_001541255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/255/GCA_001541255.1_ASM154125v1	-	HCH-1
Vibrio toranzoniae	1194427	PRJEB14181	327046	Proteobacteria	Gammaproteobacteria	4.56337	43.9	-	FLOD01	54	4106	3900	6/28/16	4/13/17	Contig	UVEG	SAMEA4016015	GCA_900089765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/765/GCA_900089765.1_VtoranzoniaeCECT7225_SPAdes_Prokka	-	CECT 7225
Bifidobacterium longum	216816	PRJNA251950	251950	Terrabacteria group	Actinobacteria	2.4806	59.8	chromosome:NZ_CP008885.1/CP008885.1	-	1	2158	1961	7/17/14	4/2/17	Complete Genome	"Institute of Disease Control and Prevention, Academy of Military Medical Science"	SAMN02843216	GCA_000730205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/205/GCA_000730205.1_ASM73020v1	-	BXY01
Micromonospora rifamycinica	291594	PRJEB14468	326082	Terrabacteria group	Actinobacteria	7.01137	73	chromosome I:NZ_LT607752.1/LT607752.1	-	1	5939	5676	8/16/16	7/11/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04488251	GCA_900090265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/090/265/GCA_900090265.1_IMG-taxon_2623620551_annotated_assembly	-	DSM 44983
Bifidobacterium longum subsp. longum JDM301	759350	PRJNA47579	47579	Terrabacteria group	Actinobacteria	2.47784	59.8	chromosome:NC_014169.1/CP002010.1	-	1	2156	1955	5/18/10	3/30/17	Complete Genome	"Department of Medical Microbiology and Parasitology,Shanghai Jiao Tong University School of Medicine"	SAMN02603181	GCA_000092325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/325/GCA_000092325.1_ASM9232v1	20525832	JDM301
Phaeobacter inhibens DSM 17395	391619	PRJNA19355	19355	Proteobacteria	Alphaproteobacteria	4.22713	59.7869	chromosome:NC_018290.1/CP002976.1; plasmid pPGA1_262:NC_018291.1/CP002977.1; plasmid pPGA1_65:NC_018288.1/CP002979.1; plasmid pPGA1_78:NC_018287.1/CP002978.1	-	4	3992	3880	7/31/12	5/19/17	Complete Genome	Moore Foundation	SAMN02603623	GCA_000154765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/765/GCA_000154765.2_ASM15476v2	22717884	DSM 17395
Gammaproteobacteria bacterium LS_SOB	1671877	PRJNA287175	287175	Proteobacteria	Gammaproteobacteria	2.69403	47.5	-	LFLB01	42	-	-	2/1/16	2/1/16	Contig	Hong Kong University of Science and Technology	SAMN03777285	GCA_001543005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/005/GCA_001543005.1_ASM154300v1	26637128	-
Agrobacterium rhizogenes	359	PRJNA373797	373797	Proteobacteria	Alphaproteobacteria	5.11438	59.7459	chromosome 1:NZ_CP019701.1/CP019701.1; chromosome 2:NZ_CP019702.1/CP019702.1; plasmid pRi2659:NZ_CP019703.2/CP019703.2	-	3	4889	4716	2/21/17	3/9/17	Complete Genome	Hangzhou Normal University	SAMN06314224	GCA_002005205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/205/GCA_002005205.2_ASM200520v2	-	K599
Serratia marcescens SM39	1334564	PRJDB1121	252434	Proteobacteria	Gammaproteobacteria	5.32602	59.7258	chromosome:NZ_AP013063.1/AP013063.1; plasmid pSMC1:NZ_AP013064.1/AP013064.1; plasmid pSMC2:NZ_AP013065.1/AP013065.1	-	3	5091	4913	1/10/14	3/25/17	Complete Genome	"Frontier Science Research Center, University of Miyazaki"	SAMD00061009	GCA_000828775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/775/GCA_000828775.1_ASM82877v1	25070509	SM39
bacterium F082	1768115	PRJNA301235	301235	unclassified Bacteria	unclassified Bacteria (miscellaneous)	2.36618	50	-	LPNG01	155	2103	2103	2/1/16	2/1/16	Scaffold	The Ohio State University	SAMN04328017	GCA_001543395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/395/GCA_001543395.1_ASM154339v1	-	-
bacterium P3	1768113	PRJNA301235	301235	unclassified Bacteria	unclassified Bacteria (miscellaneous)	3.03953	52.5	-	LPNH01	277	2777	2777	2/1/16	2/1/16	Scaffold	The Ohio State University	SAMN04328100	GCA_001543385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/385/GCA_001543385.1_ASM154338v1	-	-
bacterium P201	1768112	PRJNA301235	301235	unclassified Bacteria	unclassified Bacteria (miscellaneous)	3.03252	50	-	LPNI01	311	2755	2755	2/1/16	2/1/16	Scaffold	The Ohio State University	SAMN04328115	GCA_001543405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/405/GCA_001543405.1_ASM154340v1	-	-
bacterium F083	1768114	PRJNA301235	301235	unclassified Bacteria	unclassified Bacteria (miscellaneous)	3.68749	52.1	-	LPNF01	279	3306	3306	2/1/16	2/1/16	Scaffold	The Ohio State University	SAMN04327460	GCA_001543485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/485/GCA_001543485.1_ASM154348v1	-	-
Hydrogenibacillus schlegelii	1484	PRJNA271022	271022	Terrabacteria group	Firmicutes	2.60891	66.1	-	JXBB01	67	2502	2357	5/27/16	4/12/17	Contig	California Institute of Technology	SAMN03272447	GCA_001653195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/195/GCA_001653195.1_ASM165319v1	-	MA 48
Edwardsiella tarda FL6-60	718251	PRJNA45969	45969	Proteobacteria	Gammaproteobacteria	3.7288	59.7004	chromosome:NC_017309.1/CP002154.1; plasmid pFL6-60:NC_017318.1/CP002155.1	-	2	3402	3225	8/26/10	3/30/17	Complete Genome	IBL Leiden University	SAMN02603331	GCA_000146305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/146/305/GCA_000146305.1_ASM14630v1	22003892	FL6-60
Comamonas terrae	673548	PRJDB2973	255378	Proteobacteria	Betaproteobacteria	4.71671	65.7	-	BCNT01	40	4279	4174	1/15/16	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00019660	GCA_001544075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/075/GCA_001544075.1_ASM154407v1	-	NBRC 106524
Enterococcus canis NBRC 100695	1349765	PRJDB1349	231406	Terrabacteria group	Firmicutes	2.85421	41.9	-	BCQJ01	45	2779	2679	1/29/16	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00046312	GCA_001544375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/375/GCA_001544375.1_ASM154437v1	-	NBRC 100695
Pseudoalteromonas arabiensis	874454	PRJNA309914	309914	Proteobacteria	Gammaproteobacteria	4.45911	40.9	-	LRUF01	26	4074	3935	2/5/16	4/16/17	Scaffold	"Second Institute of Oceanography, State Oceanic Administration"	SAMN04442128	GCA_001550155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/550/155/GCA_001550155.1_ASM155015v1	-	JCM 17292
Lunatimonas lonarensis	1232681	PRJNA188314	188314	FCB group	Bacteroidetes/Chlorobi group	5.39204	46.8	-	AQHR01	128	4435	4331	5/10/13	4/8/17	Contig	Institute of Microbial Technology	SAMN02470014	GCA_000390185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/185/GCA_000390185.1_Lulo1	-	AK24
Dechloromonas denitrificans	281362	PRJNA305142	305142	Proteobacteria	Betaproteobacteria	4.23853	61.8	-	LODL01	41	4044	3914	2/7/16	6/20/17	Scaffold	Korea Advanced Institute of Science and Technology	SAMN04317214	GCA_001551835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/551/835/GCA_001551835.1_ASM155183v1	-	ATCC BAA-841
Serratia marcescens	615	PRJNA357595	357595	Proteobacteria	Gammaproteobacteria	5.30096	59.7	chromosome:NZ_CP018925.1/CP018925.1	-	1	5077	4892	7/18/17	7/21/17	Complete Genome	University of Michigan	SAMN06164058	GCA_002220655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/655/GCA_002220655.1_ASM222065v1	28536292	UMH3
Nocardiopsis trehalosi NBRC 14201	1348638	PRJDB1329	231386	Terrabacteria group	Actinobacteria	6.37955	75.2	-	BCRK01	369	5670	5403	2/6/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046510	GCA_001552555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/555/GCA_001552555.1_ASM155255v1	-	NBRC 14201
Atopobium deltae	1393034	PRJNA272084	272084	Terrabacteria group	Actinobacteria	1.4521	51.5	-	LSCR01	36	1317	1222	2/8/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN03842163	GCA_001552785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/785/GCA_001552785.1_ASM155278v1	-	DNF00019
Bacteroidales bacterium KA00251	1497953	PRJNA246513	246513	FCB group	Bacteroidetes/Chlorobi group	1.86401	42.8	-	LSCS01	34	1560	1443	2/8/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN03842166	GCA_001552775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/775/GCA_001552775.1_ASM155277v1	-	KA00251
Bacteroidales bacterium KA00344	1497954	PRJNA246514	246514	FCB group	Bacteroidetes/Chlorobi group	3.03638	45.8	-	LSCT01	143	2435	2263	2/8/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN03842167	GCA_001552765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/765/GCA_001552765.1_ASM155276v1	-	KA00344
Clostridiales bacterium KA00274	1497955	PRJNA246516	246516	Terrabacteria group	Firmicutes	1.55364	39.1	-	LSCV01	35	1410	1294	2/8/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN03842476	GCA_001552885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/885/GCA_001552885.1_ASM155288v1	-	KA00274
Tissierellia bacterium KA00581	1588751	PRJNA272080	272080	Terrabacteria group	Firmicutes	1.60089	26.2	-	LSCW01	68	1525	1398	2/8/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN03842477	GCA_001552895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/895/GCA_001552895.1_ASM155289v1	-	KA00581
Coriobacteriales bacterium DNF00809	1588753	PRJNA272082	272082	Terrabacteria group	Actinobacteria	1.69807	46.3	-	LSCX01	50	1422	1317	2/8/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN03842620	GCA_001552935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/935/GCA_001552935.1_ASM155293v1	-	DNF00809
Gemella asaccharolytica	502393	PRJNA246515	246515	Terrabacteria group	Firmicutes	1.28986	26.7	-	LSDB01	59	1180	1107	2/8/16	4/16/17	Scaffold	The Genome Institute at Washington University	SAMN04324897	GCA_001553005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/005/GCA_001553005.1_ASM155300v1	-	KA00071
Peptoniphilus coxii	755172	PRJNA246507	246507	Terrabacteria group	Firmicutes	1.83705	44.6	-	LSDG01	30	1779	1683	2/8/16	4/16/17	Scaffold	The Genome Institute at Washington University	SAMN03854407	GCA_001553115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/115/GCA_001553115.1_ASM155311v1	-	DNF00729
Porphyromonadaceae bacterium KA00676	1588749	PRJNA272076	272076	FCB group	Bacteroidetes/Chlorobi group	2.35538	55.5	-	LSDJ01	62	1855	1768	2/8/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN03854411	GCA_001553165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/165/GCA_001553165.1_ASM155316v1	-	KA00676
Veillonellaceae bacterium DNF00751	1384082	PRJNA257377	257377	Terrabacteria group	Firmicutes	1.72936	46	-	LSDS01	45	1628	1501	2/8/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN04108635	GCA_001553395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/395/GCA_001553395.1_ASM155339v1	-	DNF00751
Veillonellaceae bacterium KA00182	1588748	PRJNA272074	272074	Terrabacteria group	Firmicutes	1.56692	38.9	-	LSDT01	33	1470	1368	2/8/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN03956215	GCA_001553405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/405/GCA_001553405.1_ASM155340v1	-	KA00182
Streptomyces endus	285533	PRJDB3203	311023	Terrabacteria group	Actinobacteria	9.78166	71.9	-	BBOY01	539	8247	7468	2/2/16	3/13/17	Contig	National Institute of Technology and Evaluation Biological Resource Center	SAMD00022818	GCA_001553475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/475/GCA_001553475.1_ASM155347v1	-	NBRC 12859
Veillonellaceae bacterium DNF00626	1588754	PRJNA272083	272083	Terrabacteria group	Firmicutes	1.5936	39.3	-	LSDR01	65	1453	1359	2/8/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN03956214	GCA_001553355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/355/GCA_001553355.1_ASM155335v1	-	DNF00626
Serratia marcescens	615	PRJNA317568	317568	Proteobacteria	Gammaproteobacteria	5.12587	59.7	chromosome:NZ_CP016032.1/CP016032.1	-	1	4849	4320	6/20/16	4/21/17	Complete Genome	KUMC	SAMN04621337	GCA_001672055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/055/GCA_001672055.1_ASM167205v1	-	U36365
Trueperella pyogenes	1661	PRJNA293518	293518	Terrabacteria group	Actinobacteria	2.29582	59.7	chromosome:NZ_CP012649.1/CP012649.1	-	1	2060	1975	9/11/15	4/4/17	Complete Genome	veterinary institute	SAMN04005491	GCA_001281085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/085/GCA_001281085.1_ASM128108v1	-	2012CQ-ZSH
Hyphomicrobium denitrificans 1NES1	670307	PRJNA61091	61091	Proteobacteria	Alphaproteobacteria	3.80869	59.7	chromosome:NC_021172.1/CP005587.1	-	1	3706	3609	4/30/13	4/8/17	Complete Genome	DOE Joint Genome Institute	SAMN02598541	GCA_000230975.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/975/GCA_000230975.3_ASM23097v3	23833140	1NES1
Thermoproteus uzoniensis 768-20	999630	PRJNA64455	64455	TACK group	Crenarchaeota	1.93606	59.7	chromosome:NC_015315.1/CP002590.1	-	1	2174	2114	3/28/11	8/21/15	Complete Genome	Centre Bioengineering RAS	SAMN02603093	GCA_000193375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/375/GCA_000193375.1_ASM19337v1	21478349	768-20
candidate divison MSBL1 archaeon SCGC-AAA259A05	1698259	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	1.16163	46.8	-	LHXJ01	159	1379	1212	2/4/16	2/4/16	Contig	KAUST	SAMN03941342	GCA_001548885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/885/GCA_001548885.1_SCGC-AAA259A05	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA259D14	1698261	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	0.850372	43.4	-	LHXL01	116	1012	885	2/4/16	2/4/16	Contig	KAUST	SAMN03941549	GCA_001548915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/915/GCA_001548915.1_SCGC-AAA259D14	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA259E17	1698263	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	0.883132	47.1	-	LHXN01	141	1046	891	2/4/16	2/4/16	Contig	KAUST	SAMN03941561	GCA_001548935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/935/GCA_001548935.1_SCGC-AAA259E17	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA259E22	1698265	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	0.825701	43.7	-	LHXP01	100	954	843	2/4/16	2/4/16	Contig	KAUST	SAMN03941566	GCA_001548955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/955/GCA_001548955.1_SCGC-AAA259E22	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA259I07	1698266	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	0.637942	43.4	-	LHXQ01	90	743	671	2/4/16	2/4/16	Contig	KAUST	SAMN03941695	GCA_001548965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/965/GCA_001548965.1_SCGC-AAA259I07	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA259I09	1698267	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	1.34426	44.4	-	LHXR01	213	1605	1400	2/4/16	2/4/16	Contig	KAUST	SAMN03941696	GCA_001548995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/995/GCA_001548995.1_SCGC-AAA259I09	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA259I14	1698268	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	0.766874	43.1	-	LHXS01	120	871	774	2/4/16	2/4/16	Contig	KAUST	SAMN03941702	GCA_001549015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/015/GCA_001549015.1_SCGC-AAA259I14	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA259B11	1698260	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	0.822059	44.4	-	LHXK01	116	965	852	2/4/16	2/4/16	Contig	KAUST	SAMN03941547	GCA_001549035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/035/GCA_001549035.1_SCGC-AAA259B11	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA259J03	1698269	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	0.893784	45	-	LHXT01	147	1064	964	2/4/16	2/4/16	Contig	KAUST	SAMN03941712	GCA_001549045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/045/GCA_001549045.1_SCGC-AAA259J03	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA259D18	1698262	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	0.382865	46.9	-	LHXM01	54	441	389	2/4/16	2/4/16	Contig	KAUST	SAMN03941559	GCA_001549075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/075/GCA_001549075.1_SCGC-AAA259D18	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA259E19	1698264	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	1.41254	47	-	LHXO01	207	1674	1417	2/4/16	2/4/16	Contig	KAUST	SAMN03941564	GCA_001549095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/095/GCA_001549095.1_SCGC-AAA259E19	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA259M10	1698270	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	0.865782	44.2	-	LHXU01	127	1005	893	2/4/16	2/4/16	Contig	KAUST	SAMN03941721	GCA_001549115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/115/GCA_001549115.1_SCGC-AAA259M10	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA261C02	1698272	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	0.628209	45.7	-	LHXW01	79	776	703	2/4/16	2/4/16	Contig	KAUST	SAMN03943230	GCA_001549125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/125/GCA_001549125.1_SCGC-AAA261C02	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA259O05	1698271	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	1.05757	48.1	-	LHXV01	148	1312	1138	2/4/16	2/4/16	Contig	KAUST	SAMN03943228	GCA_001549135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/135/GCA_001549135.1_SCGC-AAA259O05	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA261D19	1698273	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	0.673667	45.5	-	LHXX01	82	785	687	2/4/16	2/4/16	Contig	KAUST	SAMN03951424	GCA_001549175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/175/GCA_001549175.1_SCGC-AAA261D19	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA261F17	1698274	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	0.523733	46	-	LHXY01	61	616	559	2/4/16	2/4/16	Contig	KAUST	SAMN03951425	GCA_001549195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/195/GCA_001549195.1_SCGC-AAA261F17	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA261F19	1698275	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	0.655981	45.3	-	LHXZ01	82	776	687	2/4/16	2/4/16	Contig	KAUST	SAMN03951426	GCA_001549215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/215/GCA_001549215.1_SCGC-AAA261F19	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA261O19	1698277	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	0.729384	45.5	-	LHYB01	98	878	779	2/4/16	2/4/16	Contig	KAUST	SAMN03951428	GCA_001549225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/225/GCA_001549225.1_SCGC-AAA261O19	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA382A03	1698278	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	0.428287	39.2	-	LHYC01	88	480	427	2/4/16	2/4/16	Contig	KAUST	SAMN03955387	GCA_001549255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/255/GCA_001549255.1_SCGC-AAA382A03	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA382A20	1698280	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	0.925397	41.8	-	LHYE01	111	1052	947	2/4/16	2/4/16	Contig	KAUST	SAMN03955389	GCA_001549275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/275/GCA_001549275.1_SCGC-AAA382A20	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA382F02	1698282	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	0.336176	41.7	-	LHYG01	34	387	344	2/4/16	2/4/16	Contig	KAUST	SAMN03955391	GCA_001549285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/285/GCA_001549285.1_SCGC-AAA382F02	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA382K21	1698283	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	0.25829	43.5	-	LHYH01	35	249	218	2/4/16	2/4/16	Contig	KAUST	SAMN03955392	GCA_001549315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/315/GCA_001549315.1_SCGC-AAA382K21	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA382N08	1698285	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	0.422936	40.2	-	LHYJ01	58	489	431	2/4/16	2/4/16	Contig	KAUST	SAMN03955403	GCA_001549325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/325/GCA_001549325.1_SCGC-AAA382N08	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA385M11	1698288	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	0.215229	46.4	-	LHYM01	32	257	228	2/4/16	2/4/16	Contig	KAUST	SAMN03955407	GCA_001549355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/355/GCA_001549355.1_SCGC-AAA385M11	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA833K04	1698258	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	0.16284	45.9	-	LHYN01	25	215	196	2/4/16	2/4/16	Contig	KAUST	SAMN03941340	GCA_001549365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/365/GCA_001549365.1_SCGC-AAA833K04	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA833F18	1698257	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	0.269915	45	-	LHYO01	24	298	278	2/4/16	2/4/16	Contig	KAUST	SAMN03940243	GCA_001549395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/395/GCA_001549395.1_SCGC-AAA833F18	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA261G05	1698276	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	0.532132	45.6	-	LHYA01	68	663	601	2/4/16	2/4/16	Contig	KAUST	SAMN03951427	GCA_001549415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/415/GCA_001549415.1_SCGC-AAA261G05	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA382A13	1698279	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	0.408808	39.8	-	LHYD01	72	508	450	2/4/16	2/4/16	Contig	KAUST	SAMN03955388	GCA_001549435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/435/GCA_001549435.1_SCGC-AAA382A13	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA382C18	1698281	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	0.546193	41.2	-	LHYF01	74	613	551	2/4/16	2/4/16	Contig	KAUST	SAMN03955390	GCA_001549445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/445/GCA_001549445.1_SCGC-AAA382C18	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA382M17	1698284	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	0.37804	43.4	-	LHYI01	63	408	356	2/4/16	2/4/16	Contig	KAUST	SAMN03955393	GCA_001549475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/475/GCA_001549475.1_SCGC-AAA382M17	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA385D11	1698286	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	0.306358	45.6	-	LHYK01	35	344	299	2/4/16	2/4/16	Contig	KAUST	SAMN03955404	GCA_001549495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/495/GCA_001549495.1_SCGC-AAA385D11	26758088	-
candidate divison MSBL1 archaeon SCGC-AAA385M02	1698287	PRJNA291812	291812	Euryarchaeota	unclassified Euryarchaeota	0.137797	35.1	-	LHYL01	16	174	156	2/4/16	2/4/16	Contig	KAUST	SAMN03955405	GCA_001549515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/515/GCA_001549515.1_SCGC-AAA385M02	26758088	-
Kordiimonas lacus	637679	PRJNA306238	306238	Proteobacteria	Alphaproteobacteria	4.02509	57.2	-	LRUA01	10	3720	3631	2/5/16	4/11/17	Scaffold	"Second Institute of Oceanography, State Oceanic Administration"	SAMN04432129	GCA_001550055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/550/055/GCA_001550055.1_ASM155005v1	20348321	S3-22
Caballeronia humi	326474	PRJEB12476	309798	Proteobacteria	Betaproteobacteria	7.6192	62.8	-	FCNW02	272	7007	6603	1/28/16	6/8/17	Contig	LM-UGent	SAMEA3731252	GCA_001544475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/475/GCA_001544475.2_ASM1544475v2	-	-
Caballeronia telluris	326475	PRJEB12477	309799	Proteobacteria	Betaproteobacteria	7.05611	64	-	FCNZ02	163	6507	6163	1/28/16	6/8/17	Contig	LM-UGent	SAMEA3731253	GCA_001544495.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/495/GCA_001544495.2_ASM1544495v2	-	-
Caballeronia terrestris	1226301	PRJEB12478	309800	Proteobacteria	Betaproteobacteria	8.20136	62.6	-	FCOL02	645	7667	6939	1/28/16	6/8/17	Contig	LM-UGent	SAMEA3731254	GCA_001544515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/515/GCA_001544515.2_ASM1544515v2	-	-
Caballeronia choica	326476	PRJEB12479	309801	Proteobacteria	Betaproteobacteria	9.77621	62.6	-	FCON02	657	9088	8288	1/28/16	6/8/17	Contig	LM-UGent	SAMEA3731255	GCA_001544535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/535/GCA_001544535.2_ASM1544535v2	-	-
Caballeronia udeis	1232866	PRJEB12480	309802	Proteobacteria	Betaproteobacteria	10.0516	60	-	FCOK02	242	9228	8773	1/28/16	4/12/17	Contig	LM-UGent	SAMEA3731256	GCA_001544555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/555/GCA_001544555.2_Burkholderia_udeis_LMG_27134	-	-
Parachlamydia sp. C2	1414722	PRJEB12521	309962	PVC group	Chlamydiae	3.42418	42	-	FCNU01	32	2874	2766	1/28/16	3/22/17	Scaffold	URMITE	SAMEA3856857	GCA_001545115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/115/GCA_001545115.1_Protochlamydia_greubae	-	C2
Mycobacterium wolinskyi	59750	PRJNA299467	299467	Terrabacteria group	Actinobacteria	7.51686	66.4	-	LQQA01	36	7325	7133	4/20/17	4/22/17	Contig	University of Trento	SAMN04216957	GCA_002101965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/965/GCA_002101965.1_ASM210196v1	-	ATCC 700010
Streptomyces thermoautotrophicus	1469144	PRJNA273420	273420	Terrabacteria group	Actinobacteria	5.13416	71	-	JYIJ01	19	4709	4471	2/1/16	3/13/17	Contig	Harvard Medical School	SAMN03328326	GCA_001543895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/895/GCA_001543895.1_ASM154389v1	-	UBT1
Edwardsiella tarda EIB202	498217	PRJNA28539	28539	Proteobacteria	Gammaproteobacteria	3.80417	59.6724	chromosome:NC_013508.1/CP001135.1; plasmid pEIB202:NC_013509.1/CP001136.1	-	2	3501	3309	11/13/09	3/30/17	Complete Genome	Chinese National Human Genome Center at Shanghai	SAMN02603129	GCA_000020865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/865/GCA_000020865.1_ASM2086v1	19865481	EIB202
Paenibacillus jilunlii	682956	PRJNA293461	293461	Terrabacteria group	Firmicutes	7.07618	50.9	-	LIPY01	124	6209	5951	2/2/16	4/11/17	Contig	UFRGS	SAMN04003972	GCA_001546055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/055/GCA_001546055.1_ASM154605v1	-	DSM 23019
Fusobacterium equinum	134605	PRJNA272098	272098	Fusobacteria	Fusobacteriia	1.79792	32.5	-	LRPX01	77	1811	1706	2/2/16	4/16/17	Scaffold	The Genome Institute at Washington University	SAMN03850946	GCA_001546395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/395/GCA_001546395.1_ASM154639v1	-	CMW8396
Hymenobacter swuensis DY53	1227739	PRJNA234054	234054	FCB group	Bacteroidetes/Chlorobi group	5.25207	59.6512	chromosome:NZ_CP007145.1/CP007145.1; plasmid pHsw1:NZ_CP007144.1/CP007144.1; plasmid pHsw2:NZ_CP007143.1/CP007143.1; plasmid pHsw3:NZ_CP007146.1/CP007146.1	-	4	4464	4367	2/24/14	4/9/17	Complete Genome	Korea Atomic Energy Research Institute	SAMN03081528	GCA_000576555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/555/GCA_000576555.1_ASM57655v1	-	DY53
Pseudomonas antarctica	219572	PRJNA320790	320790	Proteobacteria	Gammaproteobacteria	6.60704	59.648	chromosome:NZ_CP015600.1/CP015600.1; plasmid pP27494_1:NZ_CP015601.1/CP015601.1; plasmid pP27494_2:NZ_CP015602.1/CP015602.1	-	3	6208	5951	5/19/16	4/12/17	Complete Genome	Korea Polar Research Institute	SAMN04957524	GCA_001647715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/715/GCA_001647715.1_ASM164771v1	-	PAMC 27494
Serratia sp. SCBI	488142	PRJNA91109	91109	Proteobacteria	Gammaproteobacteria	5.1019	59.6381	chromosome:NZ_CP003424.1/CP003424.1; plasmid SCBI_Pl:NZ_CP003425.1/CP003425.1	-	2	4842	4528	9/4/14	4/17/17	Complete Genome	Hubbard Center for Genome Studies	SAMN02990345	GCA_000747565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/565/GCA_000747565.1_ASM74756v1	-	SCBI
Rhizobium gallicum bv. gallicum R602	1418105	PRJNA227036	227036	Proteobacteria	Alphaproteobacteria	7.31119	59.6336	chromosome:NZ_CP006877.1/CP006877.1; plasmid pRgalR602a:NZ_CP006878.1/CP006878.1; plasmid pRgalR602b:NZ_CP006879.1/CP006879.1; plasmid pRgalR602c:NZ_CP006880.1/CP006880.1	-	4	7138	6674	1/9/15	4/10/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN02393724	GCA_000816845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/845/GCA_000816845.1_ASM81684v1	-	R602
Rhizobium gallicum	56730	PRJNA293856	293856	Proteobacteria	Alphaproteobacteria	7.4742	59.631	chromosome:NZ_CP017101.1/CP017101.1; plasmid pRgalIE4872a:NZ_CP017102.1/CP017102.1; plasmid pRgalIE4872a:NZ_CP017103.1/CP017103.1; plasmid pRgalIE4872c:NZ_CP017104.1/CP017104.1; plasmid pRgalIE4872d:NZ_CP017105.1/CP017105.1	-	5	7323	6795	12/19/16	4/16/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN04010568	GCA_001908615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/615/GCA_001908615.1_ASM190861v1	-	IE4872
Paracoccus aminovorans	34004	PRJNA301387	301387	Proteobacteria	Alphaproteobacteria	4.5894	67.5	-	LNBC01	21	4475	4174	2/2/16	4/11/17	Scaffold	"Institute of Soil Science, Chinese Academy of Sciences"	SAMN04246163	GCA_001546115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/115/GCA_001546115.1_ASM154611v1	-	HPD-2
Kordiimonas sp. UBA4487	1946675	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	4.25834	57.1	-	DGNR01	16	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455156	GCA_002389025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/025/GCA_002389025.1_ASM238902v1	28894102	-
Celeribacter halophilus	576117	PRJEB17401	351607	Proteobacteria	Alphaproteobacteria	3.85974	58.1	-	FORY01	59	3732	3600	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488138	GCA_900114135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/135/GCA_900114135.1_IMG-taxon_2617270905_annotated_assembly	-	CGMCC 1.8891
Rhizobiales bacterium CCH3-A5	1768796	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	5.13829	66.5	-	LSIB01	200	4965	4768	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299425	GCA_001556025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/025/GCA_001556025.1_ASM155602v1	-	CCH3-A5
Pseudoxanthomonas mexicana	128785	PRJNA299404	299404	Proteobacteria	Gammaproteobacteria	3.94221	66.5	-	LSIF01	108	3639	3505	2/10/16	4/16/17	Contig	Georgia Institute of Technology	SAMN04299429	GCA_001556105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/105/GCA_001556105.1_ASM155610v1	-	CCH9-G4
Rhizobiales bacterium CCH10-E5	1768797	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	5.26492	67.7	-	LSIG01	236	5112	4883	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299430	GCA_001556125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/125/GCA_001556125.1_ASM155612v1	-	CCH10-E5
Neisseria perflava	33053	PRJNA299404	299404	Proteobacteria	Betaproteobacteria	3.78337	68.7	-	LSII01	279	-	-	2/10/16	2/10/16	Contig	Georgia Institute of Technology	SAMN04299433	GCA_001556165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/165/GCA_001556165.1_ASM155616v1	-	CCH6-A12
Rhizobiales bacterium CCH9-A3	1768798	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	5.12365	67.5	-	LSIK01	419	5000	4708	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299435	GCA_001556215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/215/GCA_001556215.1_ASM155621v1	-	CCH9-A3
Porphyrobacter donghaensis	267135	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	3.83614	67	-	LSJJ01	249	3737	3528	2/10/16	4/4/17	Contig	Georgia Institute of Technology	SAMN04299460	GCA_001556685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/685/GCA_001556685.1_ASM155668v1	-	CCH1-A1
Comamonadaceae bacterium CCH12-A10	1768803	PRJNA299404	299404	Proteobacteria	Betaproteobacteria	4.18651	63.5	-	LSIQ01	728	4018	3509	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299441	GCA_001556325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/325/GCA_001556325.1_ASM155632v1	-	CCH12-A10
Comamonadaceae bacterium CCH4-C5	1768804	PRJNA299404	299404	Proteobacteria	Betaproteobacteria	4.53495	63.2	-	LSIU01	821	4343	3861	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299445	GCA_001556405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/405/GCA_001556405.1_ASM155640v1	-	CCH4-C5
Xylophilus ampelinus	54067	PRJNA299404	299404	Proteobacteria	Betaproteobacteria	6.01999	68.3	-	LSJH01	1406	6074	5264	2/10/16	4/17/17	Contig	Georgia Institute of Technology	SAMN04299458	GCA_001556675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/675/GCA_001556675.1_ASM155667v1	-	CCH5-B3
Rhizobiales bacterium CCH8-D1	1768800	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	5.89683	66.9	-	LSJR01	492	5713	5401	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299468	GCA_001556775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/775/GCA_001556775.1_ASM155677v1	-	CCH8-D1
Rhizobiales bacterium CCH11-D2	1768801	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	5.86198	66.9	-	LSJV01	270	5716	5441	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299472	GCA_001556825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/825/GCA_001556825.1_ASM155682v1	-	CCH11-D2
Rhizobiales bacterium CCH2-A4	1768802	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	5.01051	67	-	LSJX01	308	4927	4692	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299474	GCA_001556855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/855/GCA_001556855.1_ASM155685v1	-	CCH2-A4
Erythrobacteraceae bacterium CCH12-C2	1768805	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	3.73125	63.8	-	LSKF01	168	3613	3443	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299482	GCA_001556995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/995/GCA_001556995.1_ASM155699v1	-	CCH12-C2
Rhodospirillaceae bacterium CCH5-H10	1768806	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	5.92129	66.2	-	LSKJ01	892	5952	5399	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299486	GCA_001557035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/035/GCA_001557035.1_ASM155703v1	-	CCH5-H10
Rhizobiales bacterium CCH6-A4	1768799	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	5.34466	67.1	-	LSJP01	522	5257	4952	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299466	GCA_001557295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/295/GCA_001557295.1_ASM155729v1	-	CCH6-A4
Photobacterium aquimaris	512643	PRJNA302718	302718	Proteobacteria	Gammaproteobacteria	4.30688	39.5	-	LNQZ01	123	3860	3658	2/10/16	4/11/17	Contig	University of Cambridge	SAMN04279319	GCA_001558115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/115/GCA_001558115.1_ASM155811v1	-	NCCB 100386
Pseudoalteromonas shioyasakiensis	1190813	PRJNA309917	309917	Proteobacteria	Gammaproteobacteria	4.80755	41.3	-	LRUE01	25	4365	4236	2/5/16	4/11/17	Scaffold	"Second Institute of Oceanography, State Oceanic Administration"	SAMN04442129	GCA_001550135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/550/135/GCA_001550135.1_ASM155013v1	-	JCM 18891
Amycolatopsis regifaucium	546365	PRJEB17334	351497	Terrabacteria group	Actinobacteria	8.28761	68.5	-	FOPQ01	49	7698	7398	10/31/16	4/14/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04489731	GCA_900113515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/515/GCA_900113515.1_IMG-taxon_2634166327_annotated_assembly	-	DSM 45072
Pseudoruegeria sabulilitoris	1510458	PRJNA303057	303057	Proteobacteria	Alphaproteobacteria	5.32468	62.4	-	LOAS01	148	4974	4797	2/10/16	4/11/17	Contig	Anhui University	SAMN04297160	GCA_001558155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/155/GCA_001558155.1_ASM155815v1	-	GJMS-35
Paramesorhizobium deserti	1494590	PRJNA302823	302823	Proteobacteria	Alphaproteobacteria	5.48221	60.9	-	LNTU01	41	5230	4989	2/11/16	4/12/17	Contig	Beijing Institute of Microbiology and Epidemiology	SAMN04280999	GCA_001558695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/695/GCA_001558695.1_ASM155869v1	27125485	A-3-E
Enterovibrio coralii	294935	PRJNA304247	304247	Proteobacteria	Gammaproteobacteria	5.502	48.3	-	LNTY01	72	5076	4016	2/11/16	4/16/17	Contig	"CIAD, A.C."	SAMN04296881	GCA_001559595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/595/GCA_001559595.1_CAIM912T.1	-	CAIM 912
Streptobacillus hongkongensis	1162717	PRJNA304683	304683	Fusobacteria	Fusobacteriia	1.46048	26.3	-	LOHY01	164	1435	1351	2/11/16	4/11/17	Scaffold	Robert Koch Institute	SAMN04306666	GCA_001559795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/795/GCA_001559795.1_ASM155979v1	-	DSM 26322
Streptobacillus felis	1384509	PRJNA304683	304683	Fusobacteria	Fusobacteriia	1.59809	26.4	-	LOHX01	349	1482	1377	2/11/16	4/12/17	Scaffold	Robert Koch Institute	SAMN04306665	GCA_001559775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/775/GCA_001559775.1_ASM155977v1	-	131000547
Clostridiales bacterium MCWD3	1766203	PRJNA305055	305055	Terrabacteria group	Firmicutes	4.78636	28.8	-	LOHE01	122	4122	3955	2/11/16	4/11/17	Contig	Korea Instittute of Ocean Science and Technology	SAMN04316851	GCA_001559865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/865/GCA_001559865.1_ASM155986v1	-	MCWD3
Rhodoferax ferrireducens T118	338969	PRJNA13908	13908	Proteobacteria	Betaproteobacteria	4.96978	59.6151	chromosome:NC_007908.1/CP000267.1; plasmid plasmid1:NC_007901.1/CP000268.1	-	2	4605	4479	3/10/06	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02598320	GCA_000013605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/605/GCA_000013605.1_ASM1360v1	-	DSM 15236
Bradyrhizobium viridifuturi	1654716	PRJNA290320	290320	Proteobacteria	Alphaproteobacteria	8.81192	64	-	LGTB01	152	8343	7130	8/5/15	8/8/17	Contig	Embrapa Soja	SAMN03890369	GCA_001238275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/275/GCA_001238275.1_ASM123827v1	26679590	SEMIA 690
Phaeobacter gallaeciensis	60890	PRJNA384319	384319	Proteobacteria	Alphaproteobacteria	4.34935	59.6102	chromosome:CP021047.1; plasmid pP128_a:CP021048.1; plasmid pP128_b:CP021049.1; plasmid pP128_c:CP021050.1; plasmid pP128_d:CP021051.1; plasmid pP128_e:CP021052.1	-	6	4171	4094	9/27/17	9/27/17	Complete Genome	Leibniz Institute DSMZ	SAMN06834800	GCA_002381365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/365/GCA_002381365.1_ASM238136v1	-	P128
Tepidibacillus sp. HK-1	1883407	PRJDB5044	335882	Terrabacteria group	Firmicutes	2.77342	36.2	-	BDGM01	77	2797	2600	8/9/16	4/18/17	Scaffold	Chiba University	SAMD00056697	GCA_001748485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/485/GCA_001748485.1_ASM174848v1	-	HK-1
Pseudovibrio hongkongensis	1647556	PRJNA299034	299034	Proteobacteria	Alphaproteobacteria	3.7466	53.3	-	LLWC01	39	3537	3402	2/16/16	4/11/17	Contig	Shenzhen University	SAMN04192297	GCA_001561995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/995/GCA_001561995.1_ASM156199v1	-	UST20140214-015B
Lysinimicrobium gelatinilyticum	1638980	PRJDB3045	262019	Terrabacteria group	Actinobacteria	3.22837	71.5	-	BBLV01	32	3020	2928	4/1/15	4/10/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00019179	GCA_000971115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/115/GCA_000971115.1_ASM97111v1	26354549	NBRC 109390
Lysinimicrobium flavum	1638981	PRJDB3045	262019	Terrabacteria group	Actinobacteria	2.98496	71.7	-	BBLW01	12	2809	2730	4/1/15	4/10/17	Contig	National Institute of Technology and Evaluation Biological Resource Center	SAMD00019180	GCA_000971135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/135/GCA_000971135.1_ASM97113v1	26354549	NBRC 109391
Lysinimicrobium aestuarii	1638982	PRJDB3045	262019	Terrabacteria group	Actinobacteria	3.14725	72.1	-	BBMD01	7	2954	2868	4/1/15	4/10/17	Contig	National Institute of Technology and Evaluation Biological Resource Center	SAMD00019187	GCA_000971375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/375/GCA_000971375.1_ASM97137v1	26354549	NBRC 109398
Lysinimicrobium pelophilum	1638984	PRJDB3045	262019	Terrabacteria group	Actinobacteria	2.68299	72.2	-	BBLY01	11	2457	2373	4/1/15	4/10/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00019182	GCA_000971175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/175/GCA_000971175.1_ASM97117v1	26354549	NBRC 109393
Lysinimicrobium soli	1638987	PRJDB3045	262019	Terrabacteria group	Actinobacteria	3.00269	72.4	-	BBLZ01	16	2824	2744	4/1/15	4/10/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00019183	GCA_000971195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/195/GCA_000971195.1_ASM97119v1	26354549	NBRC 109394
Lysinimicrobium luteum	1638988	PRJDB3045	262019	Terrabacteria group	Actinobacteria	2.91879	72.1	-	BBMA01	17	2772	2700	4/1/15	4/10/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00019184	GCA_000971215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/215/GCA_000971215.1_ASM97121v1	26354549	NBRC 109395
Lysinimicrobium subtropicum	1638989	PRJDB3045	262019	Terrabacteria group	Actinobacteria	3.07558	71.7	-	BBMB01	23	2875	2768	4/1/15	4/10/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00019185	GCA_000971235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/235/GCA_000971235.1_ASM97123v1	26354549	NBRC 109396
Lysinimicrobium rhizosphaerae	1638985	PRJDB3045	262019	Terrabacteria group	Actinobacteria	3.03437	72.2	-	BBMC01	15	2866	2766	4/1/15	4/18/17	Contig	National Institute of Technology and Evaluation Biological Resource Center	SAMD00019186	GCA_000971255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/255/GCA_000971255.1_ASM97125v1	26354549	NBRC 109397
Lysinimicrobium iriomotense	1536641	PRJDB3045	262019	Terrabacteria group	Actinobacteria	3.16444	71.9	-	BBME01	27	2951	2857	4/1/15	4/10/17	Contig	National Institute of Technology and Evaluation Biological Resource Center	SAMD00019188	GCA_000971395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/395/GCA_000971395.1_ASM97139v1	26354549	NBRC 109399
Phaeobacter gallaeciensis	60890	PRJNA384320	384320	Proteobacteria	Alphaproteobacteria	4.36437	59.6033	chromosome:CP021040.1; plasmid pP129_a:CP021041.1; plasmid pP129_b:CP021042.1; plasmid pP129_c:CP021043.1; plasmid pP129_d:CP021044.1; plasmid pP129_e:CP021045.1; plasmid pP129_f:CP021046.1	-	7	4186	4109	9/27/17	9/27/17	Complete Genome	Leibniz Institute DSMZ	SAMN06834809	GCA_002381385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/385/GCA_002381385.1_ASM238138v1	-	P129
Serratia marcescens	615	PRJNA357595	357595	Proteobacteria	Gammaproteobacteria	5.15514	59.6	chromosome:NZ_CP018927.1/CP018927.1	-	1	4918	4736	7/18/17	7/21/17	Complete Genome	University of Michigan	SAMN06164062	GCA_002220535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/535/GCA_002220535.1_ASM222053v1	28536292	UMH8
Thermotalea metallivorans	520762	PRJNA294866	294866	Terrabacteria group	Firmicutes	3.0945	40.3	-	LOEE01	110	3083	2932	2/17/16	4/16/17	Contig	"Microbial Gene Research and Resources Facility, Griffith University"	SAMN04038072	GCA_001562415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/415/GCA_001562415.1_ASM156241v1	-	B2-1
Fervidicola ferrireducens	520764	PRJNA294864	294864	Terrabacteria group	Firmicutes	2.43906	45.8	-	LOED01	107	2527	2305	2/17/16	4/16/17	Contig	"Microbial Gene Research and Resources Facility, Griffith University"	SAMN04038071	GCA_001562425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/425/GCA_001562425.1_ASM156242v1	-	Y170
Comamonas kerstersii	225992	PRJNA378865	378865	Proteobacteria	Betaproteobacteria	3.54792	59.6	chromosome:NZ_CP020121.1/CP020121.1	-	1	3353	3155	3/21/17	3/23/17	Complete Genome	Zhejiang University	SAMN06562982	GCA_002056725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/725/GCA_002056725.1_ASM205672v1	-	8943
methanogenic archaeon mixed culture ISO4-G1	1452364	PRJNA305317	305317	Euryarchaeota	Methanomicrobia	1.5935	55.5	chromosome:CP013703.1	-	1	1549	1500	2/18/16	5/4/16	Chromosome	"AgResearch, Grasslands Research Institute"	SAMN04324260	GCA_001563305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/305/GCA_001563305.1_ASM156330v1	-	-
Candidatus Thorarchaeota archaeon SMTZ1-45	1706444	PRJNA270657	270657	Asgard group	Candidatus Thorarchaeota	3.54418	42.2	-	LRSL01	119	3403	3208	2/18/16	2/18/16	Contig	University of Texas	SAMN03998759	GCA_001563335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/335/GCA_001563335.1_ASM156333v1	26824177	-
Candidatus Thorarchaeota archaeon SMTZ1-83	1706445	PRJNA270657	270657	Asgard group	Candidatus Thorarchaeota	3.26399	49.3	-	LRSK01	266	3333	3029	2/18/16	2/18/16	Contig	University of Texas	SAMN03998758	GCA_001563325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/325/GCA_001563325.1_ASM156332v1	26824177	-
Candidatus Thorarchaeota archaeon SMTZ-45	1706443	PRJNA270657	270657	Asgard group	Candidatus Thorarchaeota	2.35719	43.2	-	LRSM01	206	2527	2257	2/18/16	2/18/16	Contig	University of Texas	SAMN03998760	GCA_001563465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/465/GCA_001563465.1_ASM156346v1	26824177	-
Chryseobacterium kwangjuense	267125	PRJNA305449	305449	FCB group	Bacteroidetes/Chlorobi group	5.08743	38.5	-	LPUR01	22	4567	4466	2/18/16	4/16/17	Contig	Korea University	SAMN04325321	GCA_001563495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/495/GCA_001563495.1_ASM156349v1	27103726	KJ1R5
Haloferacaceae archaeon B1-Br10_E2g22	1732021	PRJNA286221	286221	Euryarchaeota	Halobacteria	2.36824	57.8	-	LKML01	152	-	-	2/19/16	2/19/16	Contig	"Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam"	SAMN04123324	GCA_001563795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/795/GCA_001563795.1_ASM156379v1	-	-
Natrialbaceae archaeon B1-Br10_E2g2	1729458	PRJNA286221	286221	Euryarchaeota	Halobacteria	2.87498	65.7	-	LKMK01	251	-	-	2/19/16	2/19/16	Contig	"Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam"	SAMN04123323	GCA_001563805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/805/GCA_001563805.1_ASM156380v1	-	-
Nanohaloarchaea archaeon B1-Br10_U2g1	1729453	PRJNA286221	286221	DPANN group	Candidatus Nanohaloarchaeota	0.709831	42.6	-	LKMN01	26	-	-	2/19/16	2/19/16	Contig	"Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam"	SAMN04124417	GCA_001563875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/875/GCA_001563875.1_ASM156387v1	-	-
Natrialbaceae archaeon B1-Br10_E2g27	1729459	PRJNA286221	286221	Euryarchaeota	Halobacteria	2.00621	59.9	-	LKMM01	207	-	-	2/19/16	2/19/16	Contig	"Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam"	SAMN04124416	GCA_001563885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/885/GCA_001563885.1_ASM156388v1	-	-
Nanohaloarchaea archaeon B1-Br10_U2g19	1729454	PRJNA286221	286221	DPANN group	Candidatus Nanohaloarchaeota	0.662884	41	-	LKMO01	35	-	-	2/19/16	2/19/16	Contig	"Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam"	SAMN04124418	GCA_001563905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/905/GCA_001563905.1_ASM156390v1	-	-
Nanohaloarchaea archaeon B1-Br10_U2g21	1729455	PRJNA286221	286221	DPANN group	Candidatus Nanohaloarchaeota	0.815638	39.4	-	LKMP01	24	-	-	2/19/16	2/19/16	Contig	"Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam"	SAMN04124421	GCA_001563915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/915/GCA_001563915.1_ASM156391v1	-	-
Natrialbaceae archaeon PL-Br10_E2g26	1727667	PRJNA286221	286221	Euryarchaeota	Halobacteria	1.46345	60.3	-	LKMR01	167	-	-	2/19/16	2/19/16	Contig	"Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam"	SAMN04124447	GCA_001563955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/955/GCA_001563955.1_ASM156395v1	-	-
Haloferacaceae archaeon PL-Br10_E2g29	1727654	PRJNA286221	286221	Euryarchaeota	Halobacteria	1.27824	62.2	-	LKMS01	134	-	-	2/19/16	2/19/16	Contig	"Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam"	SAMN04124448	GCA_001563965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/965/GCA_001563965.1_ASM156396v1	-	-
Nanohaloarchaea archaeon PL-Br10_U2g16	1727665	PRJNA286221	286221	DPANN group	Candidatus Nanohaloarchaeota	0.652532	42.2	-	LKMV01	54	-	-	2/19/16	2/19/16	Contig	"Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam"	SAMN04124452	GCA_001563995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/995/GCA_001563995.1_ASM156399v1	-	-
Nanohaloarchaea archaeon PL-Br10_U2g27	1727666	PRJNA286221	286221	DPANN group	Candidatus Nanohaloarchaeota	0.581882	43.2	-	LKMX01	52	-	-	2/19/16	2/19/16	Contig	"Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam"	SAMN04124454	GCA_001564035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/035/GCA_001564035.1_ASM156403v1	-	-
Rhodothermaceae bacterium Tc-Br11_B2g6_7	1729468	PRJNA286221	286221	FCB group	Bacteroidetes/Chlorobi group	3.19645	62.4	-	LKNB01	109	-	-	2/19/16	2/19/16	Contig	"Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam"	SAMN04125269	GCA_001564055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/055/GCA_001564055.1_ASM156405v1	-	-
Chitinophagaceae bacterium T5-Br10_B2g13	1729466	PRJNA286221	286221	FCB group	Bacteroidetes/Chlorobi group	4.30362	42.4	-	LKNA01	258	-	-	2/19/16	2/19/16	Contig	"Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam"	SAMN04125227	GCA_001564065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/065/GCA_001564065.1_ASM156406v1	-	-
Haloferacaceae archaeon Tc-Br11_E2g18	1729451	PRJNA286221	286221	Euryarchaeota	Halobacteria	1.27239	66.8	-	LKNE01	139	-	-	2/19/16	2/19/16	Contig	"Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam"	SAMN04125313	GCA_001564085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/085/GCA_001564085.1_ASM156408v1	-	-
Natrialbaceae archaeon Tc-Br11_E2g8	1729464	PRJNA286221	286221	Euryarchaeota	Halobacteria	2.2878	68.6	-	LKNG01	192	-	-	2/19/16	2/19/16	Contig	"Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam"	SAMN04125315	GCA_001564115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/115/GCA_001564115.1_ASM156411v1	-	-
Nanohaloarchaea archaeon B1-Br10_U2g29	1729456	PRJNA286221	286221	DPANN group	Candidatus Nanohaloarchaeota	0.526182	40.1	-	LKMQ01	35	-	-	2/19/16	2/19/16	Contig	"Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam"	SAMN04124435	GCA_001564145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/145/GCA_001564145.1_ASM156414v1	-	-
Halobacteriaceae archaeon Tc-Br11_E2g27	1729450	PRJNA286221	286221	Euryarchaeota	Halobacteria	2.09588	54.9	-	LKNH01	205	-	-	2/19/16	2/19/16	Contig	"Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam"	SAMN04125316	GCA_001564135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/135/GCA_001564135.1_ASM156413v1	-	-
Haloferacaceae archaeon PL-Br10_E2g46	1727653	PRJNA286221	286221	Euryarchaeota	Halobacteria	1.44316	51	-	LKMT01	171	-	-	2/19/16	2/19/16	Contig	"Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam"	SAMN04124449	GCA_001564175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/175/GCA_001564175.1_ASM156417v1	-	-
Nanohaloarchaea archaeon PL-Br10_U2g19	1727664	PRJNA286221	286221	DPANN group	Candidatus Nanohaloarchaeota	0.758571	42.4	-	LKMW01	55	-	-	2/19/16	2/19/16	Contig	"Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam"	SAMN04124453	GCA_001564195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/195/GCA_001564195.1_ASM156419v1	-	-
Nanohaloarchaea archaeon PL-Br10_U2g5	1727663	PRJNA286221	286221	DPANN group	Candidatus Nanohaloarchaeota	1.48085	64.5	-	LKMY01	160	-	-	2/19/16	2/19/16	Contig	"Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam"	SAMN04124455	GCA_001564205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/205/GCA_001564205.1_ASM156420v1	-	-
Flavobacteriaceae bacterium T5-Br10_B2g0	1729469	PRJNA286221	286221	FCB group	Bacteroidetes/Chlorobi group	1.49113	32.9	-	LKMZ01	132	-	-	2/19/16	2/19/16	Contig	"Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam"	SAMN04125226	GCA_001564225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/225/GCA_001564225.1_ASM156422v1	-	-
Natrialbaceae archaeon Tc-Br11_E2g1	1729461	PRJNA286221	286221	Euryarchaeota	Halobacteria	2.1558	64.5	-	LKNC01	210	-	-	2/19/16	2/19/16	Contig	"Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam"	SAMN04125286	GCA_001564255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/255/GCA_001564255.1_ASM156425v1	-	-
Natrialbaceae archaeon Tc-Br11_E2g14	1729462	PRJNA286221	286221	Euryarchaeota	Halobacteria	3.16482	63.6	-	LKND01	136	-	-	2/19/16	2/19/16	Contig	"Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam"	SAMN04125312	GCA_001564275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/275/GCA_001564275.1_ASM156427v1	-	-
Natrialbaceae archaeon Tc-Br11_E2g28	1729463	PRJNA286221	286221	Euryarchaeota	Halobacteria	2.33023	60.8	-	LKNF01	216	-	-	2/19/16	2/19/16	Contig	"Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam"	SAMN04125314	GCA_001564285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/285/GCA_001564285.1_ASM156428v1	-	-
Serratia sp. YD25	1759437	PRJNA303098	303098	Proteobacteria	Gammaproteobacteria	5.11764	59.6	chromosome:NZ_CP016948.1/CP016948.1	-	1	4866	4713	8/23/16	4/17/17	Complete Genome	Shaanxi normal university	SAMN04226521	GCA_001642805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/805/GCA_001642805.2_ASM164280v2	-	YD25
Methylothermaceae bacteria B42	1798802	PRJNA290104	290104	Proteobacteria	Gammaproteobacteria	3.04014	51.5	-	LSNW01	39	2851	2737	2/23/16	2/23/16	Scaffold	California Institute of Technology	SAMN04448867	GCA_001566965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/965/GCA_001566965.1_2044C_megahit	26779119	-
Chloroflexi bacterium OLB15	1617416	PRJNA274364	274364	Terrabacteria group	Chloroflexi	3.79816	54.7	-	LMZS01	190	3531	3490	2/24/16	4/19/16	Contig	Radboud University Nijmegen	SAMN03372535	GCA_001567085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/085/GCA_001567085.1_ASM156708v1	27029554	-
Omnitrophica bacterium OLB16	1617433	PRJNA274364	274364	PVC group	Candidatus Omnitrophica	4.05294	54.6	-	LMZT01	181	3590	3553	2/24/16	4/19/16	Contig	Radboud University Nijmegen	SAMN03372536	GCA_001567115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/115/GCA_001567115.1_ASM156711v1	27029554	-
Chloroflexi bacterium OLB14	1617415	PRJNA274364	274364	Terrabacteria group	Chloroflexi	3.04154	40.2	-	LMZR01	74	3236	3187	2/24/16	4/19/16	Contig	Radboud University Nijmegen	SAMN03372534	GCA_001567105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/105/GCA_001567105.1_ASM156710v1	27029554	-
Chlorobi bacterium OLB6	1617413	PRJNA274364	274364	FCB group	Bacteroidetes/Chlorobi group	2.54971	49.7	-	LLZP01	54	2179	2142	2/24/16	4/19/16	Contig	Radboud University Nijmegen	SAMN03372526	GCA_001567175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/175/GCA_001567175.1_ASM156717v1	27029554	-
Bacteroidetes bacterium OLB11	1617422	PRJNA274364	274364	FCB group	Bacteroidetes/Chlorobi group	2.1882	33.1	-	LNFQ01	72	2151	2122	2/24/16	4/19/16	Contig	Radboud University Nijmegen	SAMN03372531	GCA_001567165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/165/GCA_001567165.1_ASM156716v1	27029554	-
Bacteroidetes bacterium OLB12	1619897	PRJNA274364	274364	FCB group	Bacteroidetes/Chlorobi group	3.5963	43.9	-	LNFR01	118	3466	3425	2/24/16	4/19/16	Contig	Radboud University Nijmegen	SAMN03372532	GCA_001567185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/185/GCA_001567185.1_ASM156718v1	27029554	-
Chlorobi bacterium OLB7	1619898	PRJNA274364	274364	FCB group	Bacteroidetes/Chlorobi group	3.91467	57.4	-	LMYZ01	271	3470	3429	2/24/16	4/19/16	Contig	Radboud University Nijmegen	SAMN03372527	GCA_001567195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/195/GCA_001567195.1_ASM156719v1	27029554	-
Microgenomates bacterium OLB23	1617429	PRJNA274364	274364	unclassified Bacteria	Bacteria candidate phyla	0.906719	41.6	-	LMZU01	47	1158	1122	2/24/16	4/19/16	Contig	Radboud University Nijmegen	SAMN03372542	GCA_001567245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/245/GCA_001567245.1_ASM156724v1	27029554	-
Bacteroidetes bacterium OLB9	1617420	PRJNA274364	274364	FCB group	Bacteroidetes/Chlorobi group	3.1635	37.7	-	LNBW01	80	2660	2629	2/24/16	4/19/16	Contig	Radboud University Nijmegen	SAMN03372529	GCA_001567255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/255/GCA_001567255.1_ASM156725v1	27029554	-
Bacteroidetes bacterium OLB10	1617421	PRJNA274364	274364	FCB group	Bacteroidetes/Chlorobi group	2.96291	38.9	-	LNBX01	51	2596	2556	2/24/16	4/19/16	Contig	Radboud University Nijmegen	SAMN03372530	GCA_001567275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/275/GCA_001567275.1_ASM156727v1	27029554	-
candidate division WS6 bacterium OLB21	1617427	PRJNA274364	274364	unclassified Bacteria	Bacteria candidate phyla	1.05051	38.5	-	JYPD01	32	1171	1140	2/24/16	4/19/16	Contig	Radboud University Nijmegen	SAMN03372540	GCA_001567305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/305/GCA_001567305.1_ASM156730v1	27029554	-
Chlorobi bacterium OLB4	1617411	PRJNA274364	274364	FCB group	Bacteroidetes/Chlorobi group	2.47058	37.6	-	JYPE01	24	2254	2213	2/24/16	4/19/16	Contig	Radboud University Nijmegen	SAMN03372524	GCA_001567325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/325/GCA_001567325.1_ASM156732v1	27029554	-
Parcubacteria bacterium OLB19	1617425	PRJNA274364	274364	unclassified Bacteria	Bacteria candidate phyla	0.904903	37.9	-	JZEL01	31	1010	973	2/24/16	4/19/16	Contig	Radboud University Nijmegen	SAMN03372539	GCA_001567365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/365/GCA_001567365.1_ASM156736v1	27029554	-
candidate division WS6 bacterium OLB20	1617426	PRJNA274364	274364	unclassified Bacteria	Bacteria candidate phyla	1.45939	49.6	-	JYNZ01	7	1553	1507	2/24/16	4/19/16	Contig	Radboud University Nijmegen	SAMN03326276	GCA_001567355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/355/GCA_001567355.1_ASM156735v1	27029554	-
Bacteroidetes bacterium OLB8	1617419	PRJNA274364	274364	FCB group	Bacteroidetes/Chlorobi group	3.57842	41.4	-	JZQW01	74	3035	3000	2/24/16	4/19/16	Contig	Radboud University Nijmegen	SAMN03372528	GCA_001567405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/405/GCA_001567405.1_ASM156740v1	27029554	-
Armatimonadetes bacterium OLB18	1617424	PRJNA274364	274364	Terrabacteria group	Armatimonadetes	2.57127	61	-	JZQX01	224	2663	2629	2/24/16	4/19/16	Contig	Radboud University Nijmegen	SAMN03372538	GCA_001567425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/425/GCA_001567425.1_ASM156742v1	27029554	-
Chloroflexi bacterium OLB13	1617414	PRJNA274364	274364	Terrabacteria group	Chloroflexi	4.22039	62.6	-	JZRA01	148	3916	3871	2/24/16	4/19/16	Contig	Radboud University Nijmegen	SAMN03372533	GCA_001567485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/485/GCA_001567485.1_ASM156748v1	27029554	-
Acidobacteria bacterium OLB17	1617423	PRJNA274364	274364	Acidobacteria	unclassified Acidobacteria	2.97178	56.3	-	LLEU01	65	2959	2915	2/24/16	4/19/16	Contig	Radboud University Nijmegen	SAMN03372537	GCA_001567505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/505/GCA_001567505.1_ASM156750v1	27029554	-
Microgenomates bacterium OLB22	1617428	PRJNA274364	274364	unclassified Bacteria	Bacteria candidate phyla	0.95755	44.5	-	LLEV01	27	1195	1148	2/24/16	4/19/16	Contig	Radboud University Nijmegen	SAMN03372541	GCA_001567515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/515/GCA_001567515.1_ASM156751v1	27029554	-
Chlorobi bacterium OLB5	1617412	PRJNA274364	274364	FCB group	Bacteroidetes/Chlorobi group	3.26673	37.1	-	LLZO01	389	3268	3239	2/24/16	4/19/16	Contig	Radboud University Nijmegen	SAMN03372525	GCA_001567545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/545/GCA_001567545.1_ASM156754v1	27029554	-
Pseudomonas composti	658457	PRJNA312461	312461	Proteobacteria	Gammaproteobacteria	5.26501	63	-	LSSW01	34	4916	4787	2/24/16	4/12/17	Contig	Qingdao Agriculture University	SAMN04498043	GCA_001567565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/565/GCA_001567565.1_ASM156756v1	-	LY1
Paraglaciecola sp. S66	1799789	PRJNA311641	311641	Proteobacteria	Gammaproteobacteria	5.22145	42.2	-	LSNE01	20	4558	4402	2/22/16	4/12/17	Scaffold	University of Copenhagen	SAMN04487161	GCA_001565895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/895/GCA_001565895.1_ASM156589v1	27103729	S66
Clavibacter cf. michiganensis LMG 26808	1291006	PRJNA228959	228959	Terrabacteria group	Actinobacteria	3.42075	72	-	AZQZ01	70	3297	3131	6/3/14	4/9/17	Contig	Gent University	SAMN02951915	GCA_000698005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/005/GCA_000698005.1_Cm26808.1	24885539	LMG 26808
Pseudomonas sp. A3(2016)	1853130	PRJNA315635	315635	Proteobacteria	Gammaproteobacteria	6.82354	59.6	chromosome:NZ_CP014870.1/CP014870.1	-	1	6226	5959	6/10/16	4/12/17	Complete Genome	Institute of Biochemistry and Biophysics	SAMN04566726	GCA_001661075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/661/075/GCA_001661075.1_ASM166107v1	-	A3
Candidatus Nitrospira nitrosa	1742972	PRJEB11445	302410	Nitrospirae	Nitrospira	4.4224	54.8	-	CZQA01	15	4101	3993	11/17/15	7/29/17	Contig	Univie	SAMEA3638995	GCA_001458735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/735/GCA_001458735.1__COMA1_	-	-
Candidatus Nitrospira nitrificans	1742973	PRJEB11446	302411	Nitrospirae	Nitrospira	4.11708	56.6	-	CZPZ01	36	3926	3789	11/17/15	8/1/17	Contig	Univie	SAMEA3638996	GCA_001458775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/775/GCA_001458775.1__COMA2_	-	-
Pseudovibrio stylochi	1807766	PRJNA299035	299035	Proteobacteria	Alphaproteobacteria	3.68205	47	-	LLWE01	43	3371	3256	2/16/16	4/11/17	Contig	Shenzhen University	SAMN04192298	GCA_001562055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/055/GCA_001562055.1_ASM156205v1	26907771	UST20140214-052
Neptuniibacter sp. Phe_28	1795871	PRJNA301966	301966	Proteobacteria	Gammaproteobacteria	3.13099	45.7	-	LSMR01	265	3044	2780	2/23/16	2/23/16	Contig	The University of Texas at Austin	SAMN04458024	GCA_001566885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/885/GCA_001566885.1_ASM156688v1	-	-
Microtetraspora fusca	1997	PRJDB4051	309148	Terrabacteria group	Actinobacteria	9.02489	70.9	-	BBYK01	109	8144	7764	1/16/16	4/17/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00035248	GCA_001570365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/365/GCA_001570365.1_ASM157036v1	-	NBRC 13915
Microtetraspora niveoalba	46175	PRJDB4051	309148	Terrabacteria group	Actinobacteria	8.46998	71.6	-	BBYM01	98	7511	7131	1/16/16	4/17/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00035250	GCA_001570405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/405/GCA_001570405.1_ASM157040v1	-	NBRC 15239
Mycobacterium brisbanense	146020	PRJDB4227	295926	Terrabacteria group	Actinobacteria	7.38749	66.6	-	BCSX01	70	7106	6911	2/10/16	4/17/17	Scaffold	"Microbiology, Graduate School of Medical Sciences, Kyushu University"	SAMD00041172	GCA_001570425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/425/GCA_001570425.1_ASM157042v1	27231354	JCM15654
Mycobacterium canariasense	228230	PRJNA299467	299467	Terrabacteria group	Actinobacteria	6.75557	67.6	-	LQOL01	113	6783	6524	4/20/17	4/22/17	Contig	University of Trento	SAMN04216915	GCA_002101555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/555/GCA_002101555.1_ASM210155v1	-	CCUG 47953
Mycobacterium novocastrense	59813	PRJDB4227	295926	Terrabacteria group	Actinobacteria	6.22822	66.8	-	BCTA01	119	6074	5815	2/10/16	4/17/17	Scaffold	"Microbiology, Graduate School of Medical Sciences, Kyushu University"	SAMD00041175	GCA_001570485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/485/GCA_001570485.1_ASM157048v1	27231354	JCM18114
Herbidospora sakaeratensis	564415	PRJDB3871	309964	Terrabacteria group	Actinobacteria	8.5957	71	-	BBXC01	35	7650	7416	1/26/16	4/17/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00029380	GCA_001570525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/525/GCA_001570525.1_ASM157052v1	26452464	NBRC 102641
Herbidospora mongoliensis	688067	PRJDB3871	309964	Terrabacteria group	Actinobacteria	9.07175	69.4	-	BBXD01	47	8121	7813	1/26/16	4/17/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00029381	GCA_001570545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/545/GCA_001570545.1_ASM157054v1	26452464	NBRC 105882
Herbidospora yilanensis	354426	PRJDB3871	309964	Terrabacteria group	Actinobacteria	7.857	70.8	-	BBXE01	67	7189	6959	1/26/16	4/17/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00029382	GCA_001570565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/565/GCA_001570565.1_ASM157056v1	26452464	NBRC 106371
Herbidospora daliensis	295585	PRJDB3871	309964	Terrabacteria group	Actinobacteria	8.52367	70.8	-	BBXF01	18	7755	7506	1/26/16	4/17/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00029383	GCA_001570585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/585/GCA_001570585.1_ASM157058v1	26452464	NBRC 106372
Streptomyces sporocinereus	284037	PRJNA318960	318960	Terrabacteria group	Actinobacteria	10.2425	72.1	-	MDFG01	125	8445	7822	8/16/16	3/13/17	Scaffold	Hunan University	SAMN04870507	GCA_001705785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/785/GCA_001705785.1_ASM170578v1	-	OsiSh-2
Paenibacillus amylolyticus	1451	PRJDB3831	311119	Terrabacteria group	Firmicutes	6.76055	46.2	-	BCNV01	15	5990	5812	2/5/16	4/12/17	Contig	Tokyo University of Agriculture	SAMD00029048	GCA_001570725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/725/GCA_001570725.1_ASM157072v1	27034503	Heshi-A3
Nocardiopsis listeri NBRC 13360	1348637	PRJDB1328	231385	Terrabacteria group	Actinobacteria	5.68552	68.9	-	BCSH01	154	5015	4796	2/10/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046482	GCA_001570765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/765/GCA_001570765.1_ASM157076v1	-	NBRC 13360
Brevibacterium epidermidis NBRC 14811	1349751	PRJDB1335	231391	Terrabacteria group	Actinobacteria	3.70326	64.3	-	BCSJ01	25	3307	3201	2/10/16	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00046483	GCA_001570805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/805/GCA_001570805.1_ASM157080v1	-	NBRC 14811
Dietzia papillomatosis NBRC 105045	1349764	PRJDB1348	231405	Terrabacteria group	Actinobacteria	3.48677	70.9	-	BCSL01	134	3261	3088	2/10/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046476	GCA_001570845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/845/GCA_001570845.1_ASM157084v1	-	NBRC 105045
Micrococcus lylae NBRC 15355	1349773	PRJDB1358	231414	Terrabacteria group	Actinobacteria	2.6856	71.3	-	BCSN01	116	2395	2217	2/10/16	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00046485	GCA_001570885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/885/GCA_001570885.1_ASM157088v1	-	NBRC 15355
Zimmermannella alba NBRC 15616	1349786	PRJDB1371	231427	Terrabacteria group	Actinobacteria	2.14038	64.7	-	BCSO01	29	1943	1820	2/10/16	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00046486	GCA_001570905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/905/GCA_001570905.1_ASM157090v1	-	NBRC 15616
Zimmermannella bifida NBRC 103089	1349787	PRJDB1372	231428	Terrabacteria group	Actinobacteria	2.1272	61.7	-	BCSP01	37	1890	1793	2/10/16	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00046474	GCA_001570925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/925/GCA_001570925.1_ASM157092v1	-	NBRC 103089
Ferrimonas marina	299255	PRJEB18242	355525	Proteobacteria	Gammaproteobacteria	4.98377	60.5	-	FQXG01	18	4676	4573	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745129	GCA_900129905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/905/GCA_900129905.1_IMG-taxon_2588254304_annotated_assembly	-	DSM 16917
Hydrogenophaga flava NBRC 102514	1349752	PRJDB1336	231392	Proteobacteria	Betaproteobacteria	5.15191	67.1	-	BCTF01	82	4907	4778	2/18/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046730	GCA_001571145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/145/GCA_001571145.1_ASM157114v1	-	NBRC 102514
Hydrogenophaga palleronii NBRC 102513	1349791	PRJDB1376	231432	Proteobacteria	Betaproteobacteria	4.84175	66.8	-	BCTJ01	110	4517	4399	2/18/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046729	GCA_001571225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/225/GCA_001571225.1_ASM157122v1	-	NBRC 102513
Methanofollis ethanolicus	488124	PRJDB4447	309280	Euryarchaeota	Methanomicrobia	2.71391	60.3	-	BCNW01	3	2662	2554	1/19/16	4/16/17	Contig	"Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST)"	SAMD00044721	GCA_001571385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/385/GCA_001571385.1_ASM157138v1	27034500	HASU
Methanoculleus thermophilus	2200	PRJDB4448	309281	Euryarchaeota	Methanomicrobia	2.22323	59.3	-	BCNX01	23	2271	2171	1/19/16	4/16/17	Contig	"Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST)"	SAMD00044722	GCA_001571405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/405/GCA_001571405.1_ASM157140v1	27034500	CR-1
Christensenella minuta	626937	PRJNA318090	318090	Terrabacteria group	Firmicutes	2.93715	51.5	-	LWGY01	42	2847	2730	5/26/16	4/12/17	Contig	UC Davis	SAMN04633401	GCA_001652705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/705/GCA_001652705.1_ASM165270v1	-	DSM 22607
Halomonas axialensis	115555	PRJNA273706	273706	Proteobacteria	Gammaproteobacteria	3.61718	56.9	-	JYFV01	169	3485	3300	2/26/16	4/17/17	Contig	85303	SAMN03295279	GCA_001576535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/535/GCA_001576535.1_ASM157653v1	27081145	ACH-L-8
Marinimicrobia bacterium TCS53	1781244	PRJNA309376	309376	FCB group	Candidatus Marinimicrobia	1.29999	51.8	-	LSCE01	138	-	-	2/29/16	2/29/16	Contig	Hong Kong University of Science And Technology	SAMN04423158	GCA_001576965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/965/GCA_001576965.1_ASM157696v1	-	-
Marinimicrobia bacterium TCS54	1781245	PRJNA309376	309376	FCB group	Candidatus Marinimicrobia	1.28403	41.9	-	LSCD01	155	-	-	2/29/16	2/29/16	Contig	Hong Kong University of Science And Technology	SAMN04423159	GCA_001576985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/985/GCA_001576985.1_ASM157698v1	-	-
Marinimicrobia bacterium TCS55	1781246	PRJNA309376	309376	FCB group	Candidatus Marinimicrobia	1.723	41.7	-	LSCF01	98	-	-	2/29/16	2/29/16	Contig	Hong Kong University of Science And Technology	SAMN04423160	GCA_001577025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/025/GCA_001577025.1_ASM157702v1	-	-
Marinimicrobia bacterium TCS58	1781249	PRJNA309376	309376	FCB group	Candidatus Marinimicrobia	0.574944	35.9	-	LSCI01	72	-	-	2/29/16	2/29/16	Contig	Hong Kong University of Science And Technology	SAMN04423163	GCA_001577045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/045/GCA_001577045.1_ASM157704v1	-	-
Marinimicrobia bacterium TCS56	1781247	PRJNA309376	309376	FCB group	Candidatus Marinimicrobia	1.94142	50.6	-	LSCG01	161	-	-	2/29/16	2/29/16	Contig	Hong Kong University of Science And Technology	SAMN04423161	GCA_001577055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/055/GCA_001577055.1_ASM157705v1	-	-
Marinimicrobia bacterium TCS57	1781248	PRJNA309376	309376	FCB group	Candidatus Marinimicrobia	0.574944	35.9	-	LSCH01	72	-	-	2/29/16	2/29/16	Contig	Hong Kong University of Science And Technology	SAMN04423162	GCA_001577065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/065/GCA_001577065.1_ASM157706v1	-	-
Marinimicrobia bacterium TCS59	1781250	PRJNA309376	309376	FCB group	Candidatus Marinimicrobia	0.411861	47.4	-	LSCJ01	38	-	-	2/29/16	2/29/16	Contig	Hong Kong University of Science And Technology	SAMN04423164	GCA_001577105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/105/GCA_001577105.1_ASM157710v1	-	-
Cloacimonetes bacterium TCS61	1781252	PRJNA309376	309376	FCB group	Candidatus Cloacimonetes	1.08509	33.2	-	LSCL01	196	-	-	2/29/16	2/29/16	Contig	Hong Kong University of Science And Technology	SAMN04423166	GCA_001577125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/125/GCA_001577125.1_ASM157712v1	-	-
Cloacimonetes bacterium TCS60	1781251	PRJNA309376	309376	FCB group	Candidatus Cloacimonetes	0.676143	35.5	-	LSCK01	126	-	-	2/29/16	2/29/16	Contig	Hong Kong University of Science And Technology	SAMN04423165	GCA_001577135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/135/GCA_001577135.1_ASM157713v1	-	-
Candidatus Bathyarchaeota archaeon TCS64	1781242	PRJNA309376	309376	TACK group	Candidatus Bathyarchaeota	1.55662	44.7	-	LSCO01	212	-	-	2/29/16	2/29/16	Contig	Hong Kong University of Science And Technology	SAMN04423169	GCA_001577155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/155/GCA_001577155.1_ASM157715v1	-	-
Cloacimonetes bacterium TCS62	1781253	PRJNA309376	309376	FCB group	Candidatus Cloacimonetes	1.41117	33	-	LSCM01	196	-	-	2/29/16	2/29/16	Contig	Hong Kong University of Science And Technology	SAMN04423167	GCA_001577185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/185/GCA_001577185.1_ASM157718v1	-	-
Cloacimonetes bacterium TCS63	1781254	PRJNA309376	309376	FCB group	Candidatus Cloacimonetes	0.582449	33.6	-	LSCN01	120	-	-	2/29/16	2/29/16	Contig	Hong Kong University of Science And Technology	SAMN04423168	GCA_001577205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/205/GCA_001577205.1_ASM157720v1	-	-
Marinimicrobia bacterium TCS52	1781243	PRJNA309376	309376	FCB group	Candidatus Marinimicrobia	1.17559	29.3	-	LSCC01	95	-	-	2/29/16	2/29/16	Contig	Hong Kong University of Science And Technology	SAMN04423157	GCA_001577215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/215/GCA_001577215.1_ASM157721v1	-	-
Pseudomonas koreensis	198620	PRJNA312703	312703	Proteobacteria	Gammaproteobacteria	6.30176	59.6	chromosome:NZ_CP014947.1/CP014947.1	-	1	5778	5576	4/4/16	4/12/17	Complete Genome	China National Rice Research Institute	SAMN04498955	GCA_001605965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/965/GCA_001605965.1_ASM160596v1	-	D26
uncultured Clostridia bacterium	244328	PRJEB10932	303149	Terrabacteria group	Firmicutes	2.18851	53.6	-	FIZI01	59	-	-	2/12/16	2/12/16	Scaffold	Center for Microbial Communities	SAMEA3730008	GCA_900016865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/865/GCA_900016865.1_Clostridia_bin_genome_5	-	-
Serratia marcescens	615	PRJNA294721	294721	Proteobacteria	Gammaproteobacteria	5.12703	59.6	chromosome:NZ_CP012639.1/CP012639.1	-	1	4849	4673	9/9/15	3/26/17	Complete Genome	"Shin's Lab., Kyungpook National University"	SAMN04029108	GCA_001280365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/365/GCA_001280365.1_ASM128036v1	-	RSC-14
Cephaloticoccus primus	1548207	PRJNA310109	310109	PVC group	Verrucomicrobia	2.35697	63	-	LSZQ01	72	1856	1757	3/3/16	4/12/17	Contig	Calvin College	SAMN04456986	GCA_001580015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/015/GCA_001580015.1_ASM158001v1	-	CAG34
Cephaloticoccus capnophilus	1548208	PRJNA310109	310109	PVC group	Verrucomicrobia	2.0925	60.5	-	LSZP01	66	1692	1600	3/3/16	4/12/17	Contig	Calvin College	SAMN04456987	GCA_001580045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/045/GCA_001580045.1_ASM158004v1	-	CV41
Ventosimonas gracilis	1680762	PRJNA310109	310109	Proteobacteria	Gammaproteobacteria	2.61915	54.9	-	LSZO01	222	2588	2451	3/3/16	3/15/17	Contig	Calvin College	SAMN04450862	GCA_001580025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/025/GCA_001580025.1_ASM158002v1	27054961	CV58
Rothia mucilaginosa	43675	PRJDB4139	292761	Terrabacteria group	Actinobacteria	2.29272	59.6	chromosome Unknown:NZ_AP014938.1/AP014938.1	-	1	1791	1717	8/12/15	4/4/17	Complete Genome	osaka dental university	SAMD00036190	GCA_001548235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/235/GCA_001548235.1_ASM154823v1	26430041	NUM-Rm6536
Anaerotignum neopropionicum	36847	PRJNA309662	309662	Terrabacteria group	Firmicutes	3.19488	40.2	-	LRVM01	29	3064	2920	2/24/16	9/26/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04437757	GCA_001571775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/775/GCA_001571775.1_ASM157177v1	27081124	DSM-3847
Clostridiales bacterium KA00134	1588750	PRJNA272081	272081	Terrabacteria group	Firmicutes	1.73018	35.1	-	LTAF01	55	1621	1513	2/25/16	4/12/17	Scaffold	The Genome Institute at Washington University	SAMN04498913	GCA_001574395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/395/GCA_001574395.1_ASM157439v1	-	KA00134
Tsukamurella tyrosinosolvens	57704	PRJEB16392	349304	Terrabacteria group	Actinobacteria	5.28112	71.1	-	FNSA01	4	5310	5133	10/22/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04489793	GCA_900104775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/775/GCA_900104775.1_IMG-taxon_2639762617_annotated_assembly	-	DSM 44234
Tsukamurella pulmonis	47312	PRJEB16167	348911	Terrabacteria group	Actinobacteria	4.78306	70.9	-	FNLF01	2	4621	4478	10/20/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04489765	GCA_900103175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/175/GCA_900103175.1_IMG-taxon_2634166370_annotated_assembly	-	DSM 44142
Psychrobacter cibarius	282669	PRJEB9944	310448	Proteobacteria	Gammaproteobacteria	3.62962	43.7	-	CZJV02	241	3083	2930	2/2/16	6/12/17	Contig	Universitetsparken 15	SAMEA3489744	GCA_900016235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/235/GCA_900016235.2_ASM90001623v2	-	W1
Pseudoclavibacter helvolus	255205	PRJEB9948	310450	Terrabacteria group	Actinobacteria	3.91029	67.1	-	CZJY01	125	3683	3489	2/2/16	4/12/17	Contig	Universitetsparken 15	SAMEA3490268	GCA_900014995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/995/GCA_900014995.1_Draft_genome_of_Pseudoclavibacter_helvolus_G8	-	G8
Candidatus Desulfofervidus auxilii	1621989	PRJNA276404	276404	Proteobacteria	delta/epsilon subdivisions	2.54021	37.2	chromosome:NZ_CP013015.1/CP013015.1	-	1	2565	2457	2/29/16	4/11/17	Chromosome	Max Planck Institute for Marine Microbiology	SAMN03372543	GCA_001577525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/525/GCA_001577525.1_ASM157752v1	-	HS1
Methanolobus sp. YSF-03	1874706	PRJNA329468	329468	Euryarchaeota	Methanomicrobia	3.16472	41.3	-	MBKP01	106	3032	2841	8/7/17	8/9/17	Contig	National Chung Hsing University	SAMN05413111	GCA_002243045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/045/GCA_002243045.1_ASM224304v1	-	YSF-03
Methanohalophilus sp. T328-1	1794907	PRJNA308326	308326	Euryarchaeota	Methanomicrobia	1.95242	42.4	-	LSRU01	260	2227	2227	2/29/16	2/29/16	Contig	The Ohio State University	SAMN04432769	GCA_001577555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/555/GCA_001577555.1_ASM157755v1	-	-
Candidatus Frackibacter sp. T328-2	1785949	PRJNA308326	308326	Terrabacteria group	Firmicutes	2.21066	33.5	-	LSBO01	198	2393	2393	2/29/16	2/29/16	Contig	The Ohio State University	SAMN04432553	GCA_001577625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/625/GCA_001577625.1_ASM157762v1	-	-
Halomonadaceae bacterium T82-2	1783518	PRJNA308326	308326	Proteobacteria	Gammaproteobacteria	3.42107	67.1	-	LSBP01	55	3140	3140	2/29/16	2/29/16	Contig	The Ohio State University	SAMN04432558	GCA_001577635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/635/GCA_001577635.1_ASM157763v1	-	-
Candidatus Adiutrix intracellularis	1705730	PRJNA78659	78659	Proteobacteria	delta/epsilon subdivisions	2.07649	43.3	-	LQAA01	155	1442	1283	2/29/16	2/29/16	Scaffold	JGI	SAMN04002515	GCA_001577715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/715/GCA_001577715.1_ASM157771v1	26914459	-
Candidatus Phytoplasma oryzae	203274	PRJNA310404	310404	Terrabacteria group	Tenericutes	0.533195	19.3	-	LTBM01	28	459	429	3/2/16	4/16/17	Contig	International Centre for Insect Physiology and Ecology	SAMN04452058	GCA_001578535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/535/GCA_001578535.1_ASM157853v1	27103722	-
Lactococcus sp. DD01	1776443	PRJNA304333	304333	Terrabacteria group	Firmicutes	2.31319	37.8	-	LQOE01	37	2301	2101	3/2/16	4/12/17	Scaffold	University of Kaiserslautern	SAMN04324320	GCA_001578715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/715/GCA_001578715.1_ASM157871v1	27303717	DD01
Magnetospirillum caucaseum	1244869	PRJNA187412	187412	Proteobacteria	Alphaproteobacteria	4.87051	66	-	AONQ01	236	4659	4432	2/26/13	5/19/17	Contig	Centre Bioengineering RAS	SAMN02469417	GCA_000342045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/045/GCA_000342045.1_MagSO-1_1.0	24723706	SO-1
Trueperella pyogenes TP8	1435056	PRJNA231032	231032	Terrabacteria group	Actinobacteria	2.27249	59.6	chromosome:NZ_CP007003.1/CP007003.1	-	1	2079	1971	1/7/15	4/2/17	Complete Genome	Sichuan University	SAMN03275449	GCA_000816065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/065/GCA_000816065.1_ASM81606v1	-	TP8
Weissella sp. DD23	1777865	PRJNA304333	304333	Terrabacteria group	Firmicutes	2.54496	45	-	LQQL01	153	2431	1912	3/2/16	4/12/17	Scaffold	University of Kaiserslautern	SAMN04325049	GCA_001579105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/105/GCA_001579105.1_ASM157910v1	27303717	DD23
Edwardsiella piscicida C07-087	1288122	PRJNA187997	187997	Proteobacteria	Gammaproteobacteria	3.85704	59.6	chromosome:NC_020796.1/CP004141.1	-	1	3563	3394	3/22/13	4/8/17	Complete Genome	Mississippi State University	SAMN02603613	GCA_000348565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/565/GCA_000348565.1_ASM34856v1	24265493	C07-087
Collimonas fungivorans Ter331	1005048	PRJNA65451	65451	Proteobacteria	Betaproteobacteria	5.1869	59.6	chromosome:NC_015856.1/CP002745.1	-	1	4698	4550	7/20/11	5/18/17	Complete Genome	Netherlands Institute of Ecology (NIOO-KNAW)	SAMN02603677	GCA_000221045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/045/GCA_000221045.1_ASM22104v1	"153,059,241,645,789,000,000,000"	Ter331
Rothia mucilaginosa DY-18	680646	PRJDA38547	38547	Terrabacteria group	Actinobacteria	2.2646	59.6	chromosome:NC_013715.1/AP011540.1	-	1	1774	1703	1/6/10	4/10/17	Complete Genome	"Department of Bacteriology, Osaka Dental University"	SAMD00060968	GCA_000011025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/025/GCA_000011025.1_ASM1102v1	-	DY-18
Kordiimonas lipolytica	1662421	PRJNA306217	306217	Proteobacteria	Alphaproteobacteria	4.55778	56.3	-	LRUB01	36	4279	4147	2/5/16	4/11/17	Scaffold	"Second Institute of Oceanography, State Oceanic Administration"	SAMN04432128	GCA_001550065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/550/065/GCA_001550065.1_ASM155006v1	-	M41
Kocuria turfanensis	388357	PRJNA310393	310393	Terrabacteria group	Actinobacteria	4.15964	72.7102	chromosome:NZ_CP014480.1/CP014480.1; plasmid unnamed1:NZ_CP014481.1/CP014481.1; plasmid unnamed2:NZ_CP014482.1/CP014482.1; plasmid unnamed4:NZ_CP014483.1/CP014483.1; plasmid unnamed5:NZ_CP014484.1/CP014484.1	-	5	3830	3649	3/7/16	4/17/17	Chromosome	Hubei University of Technology	SAMN04455734	GCA_001580365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/365/GCA_001580365.1_ASM158036v1	-	HO-9042
Paraburkholderia monticola	1399968	PRJNA240348	240348	Proteobacteria	Betaproteobacteria	7.84538	63.8	-	LRBG01	39	7107	6887	3/7/16	4/12/17	Contig	Seoul National University	SAMN02676640	GCA_001580545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/545/GCA_001580545.1_ASM158054v1	25472981	JC2948
Acetobacter cerevisiae	178900	PRJNA288385	288385	Proteobacteria	Alphaproteobacteria	3.08807	58	-	LHZA01	157	2832	2658	3/7/16	4/12/17	Contig	Ghent University	SAMN03799256	GCA_001580535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/535/GCA_001580535.1_ASM158053v1	-	LMG 1625
Caballeronia megalochromosomata	1399969	PRJNA241423	241423	Proteobacteria	Betaproteobacteria	9.50567	62.7	-	LRBF01	285	8729	8299	3/7/16	4/12/17	Contig	Seoul Nat'l University	SAMN02947773	GCA_001580565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/565/GCA_001580565.1_ASM158056v1	25563916	JC2949
Gluconobacter japonicus	376620	PRJNA288385	288385	Proteobacteria	Alphaproteobacteria	3.16324	55.8	-	LHZH01	135	3043	2836	3/7/16	4/12/17	Contig	Ghent University	SAMN03799278	GCA_001580715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/715/GCA_001580715.1_ASM158071v1	-	A813
Halanaerobium sp. T82-1	1794808	PRJNA308326	308326	Terrabacteria group	Firmicutes	2.82679	33.3	-	LSBN01	392	2976	2976	2/29/16	2/29/16	Contig	The Ohio State University	SAMN04417677	GCA_001577545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/545/GCA_001577545.1_ASM157754v1	-	-
Serratia marcescens WW4	435998	PRJNA88659	88659	Proteobacteria	Gammaproteobacteria	5.2447	59.5927	chromosome:NC_020211.1/CP003959.1; plasmid pSmWW4:NC_020212.1/CP003960.1	-	2	4992	4830	2/4/13	3/23/17	Complete Genome	Academia Sinica	SAMN02602965	GCA_000336425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/425/GCA_000336425.1_ASM33642v1	"2,355,853,223,398,520"	WW4
Gluconobacter roseus	586239	PRJNA288385	288385	Proteobacteria	Alphaproteobacteria	2.88121	59.9	-	LHZP01	29	2648	2507	3/7/16	4/16/17	Contig	Ghent University	SAMN03799287	GCA_001580885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/885/GCA_001580885.1_ASM158088v1	-	LMG 1418
Marichromatium gracile	1048	PRJNA312715	312715	Proteobacteria	Gammaproteobacteria	3.84025	68.9	-	LSYU01	120	3390	3257	3/8/16	4/12/17	Contig	Michigan State University	SAMN04505658	GCA_001583505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/505/GCA_001583505.1_ASM158350v1	27151789	YL28
Edwardsiella piscicida	1263550	PRJNA325543	325543	Proteobacteria	Gammaproteobacteria	3.92677	59.5908	chromosome:NZ_CP016044.1/CP016044.1; plasmid unnamed1:NZ_CP016445.1/CP016445.1	-	2	3626	3371	9/16/16	4/18/17	Complete Genome	Mississippi State University	SAMN05240433	GCA_001729265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/265/GCA_001729265.1_ASM172926v1	-	S11-285
Sterolibacterium denitrificans	157592	PRJNA288611	288611	Proteobacteria	Betaproteobacteria	0.952224	63.6	-	LFZK01	3	847	814	3/11/16	4/16/17	Scaffold	Academia Sinica	SAMN03817231	GCA_001586935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/935/GCA_001586935.1_ASM158693v1	26872041	DSM 13999
Bacillus sporothermodurans	46224	PRJNA270602	270602	Terrabacteria group	Firmicutes	4.04783	35.7	-	LQYN01	176	4107	3850	3/11/16	4/17/17	Scaffold	University of Groningen	SAMN03267288	GCA_001587375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/375/GCA_001587375.1_ASM158737v1	27174261	B4102
Arc I group archaeon BMIXfssc0709_Meth_Bin006	1706438	PRJNA293769	293769	Euryarchaeota	Methanomicrobia	1.55773	34.5	-	LNJC01	61	1769	1730	3/11/16	3/11/16	Contig	University of Illinois	SAMN04009752	GCA_001587575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/575/GCA_001587575.1_ASM158757v1	26943620	-
Arc I group archaeon ADurb1013_Bin02101	1706433	PRJNA293767	293767	Euryarchaeota	Methanomicrobia	1.49543	33.4	-	LNJB01	77	1635	1591	3/11/16	3/11/16	Scaffold	University of Illinois	SAMN04009747	GCA_001587595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/595/GCA_001587595.1_ASM158759v1	26943620	-
Arc I group archaeon ADurb1113_Bin01801	1706434	PRJNA293767	293767	Euryarchaeota	Methanomicrobia	1.49713	33.3	-	LNJD01	60	1643	1597	3/11/16	3/11/16	Scaffold	University of Illinois	SAMN04009748	GCA_001587605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/605/GCA_001587605.1_ASM158760v1	26943620	-
Arc I group archaeon ADurb1213_Bin02801	1706435	PRJNA293767	293767	Euryarchaeota	Methanomicrobia	1.4823	33.2	-	LNJE01	66	1632	1585	3/11/16	3/11/16	Scaffold	University of Illinois	SAMN04009749	GCA_001587635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/635/GCA_001587635.1_ASM158763v1	26943620	-
Arc I group archaeon B03fssc0709_Meth_Bin005	1706436	PRJNA293769	293769	Euryarchaeota	Methanomicrobia	1.61075	34.3	-	LNGE01	87	1838	1802	3/11/16	3/11/16	Contig	University of Illinois	SAMN04009750	GCA_001587655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/655/GCA_001587655.1_ASM158765v1	26943620	-
Arc I group archaeon U1lsi0528_Bin089	1705564	PRJNA293769	293769	Euryarchaeota	Methanomicrobia	1.79446	34.1	-	LNGD01	313	1999	1963	3/11/16	3/11/16	Contig	University of Illinois	SAMN04009068	GCA_001587675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/675/GCA_001587675.1_ASM158767v1	26943620	-
Arc I group archaeon B15fssc0709_Meth_Bin003	1706437	PRJNA293769	293769	Euryarchaeota	Methanomicrobia	1.65805	34.6	-	LNGF01	76	1885	1843	3/11/16	3/11/16	Contig	University of Illinois	SAMN04009751	GCA_001587695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/695/GCA_001587695.1_ASM158769v1	26943620	-
Arc I group archaeon U1lsi0528_Bin055	1705409	PRJNA293769	293769	Euryarchaeota	Methanomicrobia	1.99421	35.4	-	LNGC01	306	2328	2291	3/11/16	3/11/16	Contig	University of Illinois	SAMN04008119	GCA_001587715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/715/GCA_001587715.1_ASM158771v1	26943620	-
Ideonella sakaiensis	1547922	PRJDB4046	291493	Proteobacteria	Betaproteobacteria	6.14206	72.9	-	BBYR01	227	5566	5375	7/29/15	4/11/17	Contig	"Department of Polymer Chemistry, Graduate School of Engineering, Kyoto University, 302 Katsura Int'tech Center Kyotodaigaku-Katsura, Nishikyo-ku, Kyoto 615-8530, Japan"	SAMD00034998	GCA_001293525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/525/GCA_001293525.1_ASM129352v1	26965627	201-F6
Paeniglutamicibacter antarcticus	494023	PRJEB9950	310451	Terrabacteria group	Actinobacteria	4.43308	61.7	-	CZJT01	170	4030	3865	2/2/16	4/17/17	Contig	Universitetsparken 15	SAMEA3490269	GCA_900010755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/755/GCA_900010755.1_Pseudoclavibacter_helvolus_strain_W3	-	W2
Grimontia marina	646534	PRJEB12682	314204	Proteobacteria	Gammaproteobacteria	5.6907	48.2	-	FIZY01	294	5255	4829	3/4/16	4/17/17	Contig	UVEG	SAMEA3872803	GCA_900060185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/185/GCA_900060185.1_GmarinaCECT8713_SPAdes_Prokka	-	CECT 8713
Phaeobacter inhibens	221822	PRJNA361514	361514	Proteobacteria	Alphaproteobacteria	4.29138	59.558	chromosome:NZ_CP019307.1/CP019307.1; plasmid pDOK1-1-1:NZ_CP019308.1/CP019308.1; plasmid pDOK1-1-2:NZ_CP019309.1/CP019309.1; plasmid pDOK1-1-3:NZ_CP019310.1/CP019310.1; plasmid pDOK1-1-4:NZ_CP019311.1/CP019311.1	-	5	4071	3855	1/23/17	4/17/17	Complete Genome	Korea Research Institute of Bioscience & Biotechnology	SAMN06234523	GCA_001969345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/345/GCA_001969345.1_ASM196934v1	-	DOK1-1
Rothia mucilaginosa	43675	PRJNA231221	231221	Terrabacteria group	Actinobacteria	2.40877	59.5442	chromosome:CP023510.1; plasmid unnamed:CP023509.1	-	2	1928	1836	9/28/17	9/28/17	Complete Genome	US Food and Drug Administration 	SAMN07312413	GCA_002386365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/365/GCA_002386365.1_ASM238636v1	-	FDAARGOS_369
Snodgrassella sp. CFCC 13594	1775559	PRJNA308517	308517	Proteobacteria	Betaproteobacteria	2.37291	47.8	-	LQXR01	131	2371	2030	3/14/16	4/12/17	Contig	Research Institute of Forest Ecology Environment and Protection	SAMN04364163	GCA_001590725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/590/725/GCA_001590725.1_ASM159072v1	-	CFCC 13594
Brevibacterium ravenspurgense 5401308 = CCUG 53855	1176165	PRJNA159637	159637	Terrabacteria group	Actinobacteria	2.34926	62.3	-	CAJD01	26	2162	2068	5/24/12	4/7/17	Contig	URMITE	SAMEA3138417	GCA_000285915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/915/GCA_000285915.1_ASM28591v1	-	5401308
[Clostridium] paradoxum JW-YL-7 = DSM 7308	1121328	PRJNA310335	310335	Terrabacteria group	Firmicutes	1.92559	30.2	-	LSFY01	3	2008	1834	3/9/16	4/16/17	Contig	Oak Ridge National Lab	SAMN04450498	GCA_001584565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/565/GCA_001584565.1_ASM158456v1	27151784	JW-YL-7
Asticcacaulis excentricus CB 48	573065	PRJNA32595	32595	Proteobacteria	Alphaproteobacteria	4.30878	59.5298	chromosome 1:NC_014816.1/CP002395.1; chromosome 2:NC_014817.1/CP002396.1; plasmid pASTEX01:NC_014818.1/CP002397.1; plasmid pASTEX02:NC_014819.1/CP002398.1	-	4	3855	3755	12/22/10	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002561	GCA_000175215.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/215/GCA_000175215.2_ASM17521v2	-	CB 48
Rhizobium tropici CIAT 899	698761	PRJNA42391	42391	Proteobacteria	Alphaproteobacteria	6.68633	59.5131	chromosome:NC_020059.1/CP004015.1; plasmid pRtrCIAT899a:NC_020060.1/CP004016.1; plasmid pRtrCIAT899b:NC_020061.1/CP004017.1; plasmid pRtrCIAT899c:NC_020062.1/CP004018.1	-	4	6419	6208	1/3/13	5/19/17	Complete Genome	Universidad Nacional Autonoma de Mexico	SAMN02604105	GCA_000330885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/885/GCA_000330885.1_ASM33088v1	23270491	CIAT 899
Sulfitobacter pseudonitzschiae	1402135	PRJNA380207	380207	Proteobacteria	Alphaproteobacteria	5.1216	59.5101	chromosome:NZ_CP022415.1/CP022415.1; plasmid pSMR1-1:NZ_CP022416.1/CP022416.1; plasmid pSMR1-2:NZ_CP022417.1/CP022417.1; plasmid pSMR1-3:NZ_CP022418.1/CP022418.1; plasmid pSMR1-4:NZ_CP022419.1/CP022419.1; plasmid pSMR1-5:NZ_CP022420.1/CP022420.1; plasmid pSMR1-6:NZ_CP022421.1/CP022421.1; plasmid pSMR1-7:NZ_CP022422.1/CP022422.1	-	8	4970	4792	7/20/17	7/22/17	Complete Genome	University of Gothenburg	SAMN07316509	GCA_002222635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/222/635/GCA_002222635.1_ASM222263v1	-	SMR1
Serratia marcescens	615	PRJNA357595	357595	Proteobacteria	Gammaproteobacteria	5.19291	59.5	chromosome:NZ_CP018926.1/CP018926.1	-	1	4962	4764	7/18/17	7/21/17	Complete Genome	University of Michigan	SAMN06164060	GCA_002220675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/675/GCA_002220675.1_ASM222067v1	28536292	UMH6
Sphaerospermopsis aphanizomenoides BCCUSP55	1810943	PRJNA314267	314267	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.30609	39.4	-	LUFH01	1429	-	-	3/10/16	3/10/16	Contig	University of Sao Paulo	SAMN04531070	GCA_001586785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/785/GCA_001586785.1_ASM158678v1	-	BCCUSP55
Bacillus fastidiosus NBRC 101226	1348628	PRJDB1316	231373	Terrabacteria group	Firmicutes	4.41064	35.1	-	BCVG01	239	4380	4260	2/27/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046994	GCA_001591625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/625/GCA_001591625.1_ASM159162v1	-	NBRC 101226
Bacillus korlensis NBRC 107688	1348629	PRJDB1318	231375	Terrabacteria group	Firmicutes	4.95102	38.2	-	BCVH01	69	4780	4681	2/27/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046998	GCA_001591645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/645/GCA_001591645.1_ASM159164v1	-	NBRC 107688
Bacillus soli NBRC 102451	1348630	PRJDB1319	231376	Terrabacteria group	Firmicutes	5.46481	39.5	-	BCVI01	133	5284	5109	2/27/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00047003	GCA_001591665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/665/GCA_001591665.1_ASM159166v1	-	NBRC 102451
Roseivirga echinicomitans	296218	PRJNA308522	308522	FCB group	Bacteroidetes/Chlorobi group	4.18991	40	-	LRDB01	53	3730	3658	3/16/16	7/14/17	Contig	"FACULTY OF BIOSCIENCES AND MEDICAL ENGINEERING, UNIVERSITI TEKNOLOGI MALAYSIA"	SAMN04382068	GCA_001592935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/935/GCA_001592935.1_ASM159293v1	-	KMM 6058
Roseivirga ehrenbergii	279360	PRJNA262616	262616	FCB group	Bacteroidetes/Chlorobi group	4.24372	39.3	-	LQZQ01	52	3711	3648	3/16/16	7/14/17	Contig	"FACULTY OF BIOSCIENCES AND MEDICAL ENGINEERING, UNIVERSITI TEKNOLOGI MALAYSIA"	SAMN03084331	GCA_001593005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/005/GCA_001593005.1_ASM159300v1	-	KMM 6017
Roseivirga spongicola	333140	PRJNA309618	309618	FCB group	Bacteroidetes/Chlorobi group	4.4811	40.2	-	LRPC01	33	3943	3874	3/16/16	7/14/17	Contig	"FACULTY OF BIOSCIENCES AND MEDICAL ENGINEERING, UNIVERSITI TEKNOLOGI MALAYSIA"	SAMN04423155	GCA_001592965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/965/GCA_001592965.1_ASM159296v1	-	UST030701-084
Neorickettsia sp. 179522	1714371	PRJNA295290	295290	Proteobacteria	Alphaproteobacteria	0.859205	41.1	-	LNGI01	1	798	750	3/17/16	4/12/17	Scaffold	The Genome Institute	SAMN04272095	GCA_001593535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/535/GCA_001593535.1_ASM159353v1	-	179522
Gammaproteobacteria bacterium F7	1813817	PRJNA312770	312770	Proteobacteria	Gammaproteobacteria	2.58471	48.5	-	LUKI01	214	-	-	3/17/16	3/17/16	Contig	University of East Anglia	SAMN04510347	GCA_001593685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/685/GCA_001593685.1_F7	-	-
Candidatus Bathyarchaeota archaeon B63	1779372	PRJNA312413	312413	TACK group	Candidatus Bathyarchaeota	0.859377	53.9	-	LUCF01	97	823	823	3/18/16	3/18/16	Scaffold	Shanghai Jiao Tong University	SAMN04412737	GCA_001593845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/845/GCA_001593845.1_ASM159384v1	-	-
Candidatus Bathyarchaeota archaeon B25	1779369	PRJNA312413	312413	TACK group	Candidatus Bathyarchaeota	0.818882	50.5	-	LUCC01	71	857	857	3/18/16	3/18/16	Scaffold	Shanghai Jiao Tong University	SAMN04412734	GCA_001593855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/855/GCA_001593855.1_ASM159385v1	-	-
Candidatus Bathyarchaeota archaeon B24	1779368	PRJNA312413	312413	TACK group	Candidatus Bathyarchaeota	1.7314	51.1	-	LUCB01	37	1576	1576	3/18/16	3/18/16	Scaffold	Shanghai Jiao Tong University	SAMN04412733	GCA_001593865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/865/GCA_001593865.1_ASM159386v1	-	-
Candidatus Bathyarchaeota archaeon B23	1779367	PRJNA312413	312413	TACK group	Candidatus Bathyarchaeota	0.717825	61.8	-	LUCA01	75	747	747	3/18/16	3/18/16	Scaffold	Shanghai Jiao Tong University	SAMN04412732	GCA_001593875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/875/GCA_001593875.1_ASM159387v1	-	-
Candidatus Bathyarchaeota archaeon B26-1	1779370	PRJNA312413	312413	TACK group	Candidatus Bathyarchaeota	1.3481	52.7	-	LUCD01	124	1185	1185	3/18/16	3/18/16	Scaffold	Shanghai Jiao Tong University	SAMN04412735	GCA_001593925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/925/GCA_001593925.1_ASM159392v1	-	-
Candidatus Bathyarchaeota archaeon B26-2	1779371	PRJNA312413	312413	TACK group	Candidatus Bathyarchaeota	1.89019	51.9	-	LUCE01	73	1630	1630	3/18/16	3/18/16	Scaffold	Shanghai Jiao Tong University	SAMN04412736	GCA_001593935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/935/GCA_001593935.1_ASM159393v1	-	-
Halalkalicoccus paucihalophilus	1008153	PRJNA313152	313152	Euryarchaeota	Halobacteria	3.98041	61.7	-	LTAZ01	23	4052	3774	3/18/16	4/17/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04516086	GCA_001593955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/955/GCA_001593955.1_ASM159395v1	-	DSM 24557
Clostridium tepidiprofundi DSM 19306	1121338	PRJNA313156	313156	Terrabacteria group	Firmicutes	3.06011	29.4	-	LTBA01	175	2839	2613	3/18/16	4/17/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04516102	GCA_001594005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/005/GCA_001594005.1_ASM159400v1	27174286	DSM 19306
Moorella mulderi DSM 14980	1122241	PRJNA313163	313163	Terrabacteria group	Firmicutes	2.99984	54.5	-	LTBC01	72	3093	2919	3/18/16	4/17/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04516207	GCA_001594015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/015/GCA_001594015.1_ASM159401v1	27231372	DSM 14980
Branchiibius sp. NY16-3462-2	1807500	PRJNA313208	313208	Terrabacteria group	Actinobacteria	3.83821	67.1	-	LVCF01	50	3712	3548	3/18/16	5/24/16	Contig	Wadsworth Center	SAMN04516865	GCA_001594145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/145/GCA_001594145.1_ASM159414v1	27174280	-
Deltaproteobacteria bacterium GWC2_55_46	1797818	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.78876	55.4	-	LVEI02	3	2689	2593	3/21/16	11/4/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04316215	GCA_001595385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/385/GCA_001595385.2_ASM159538v2	27774985	-
Thermoplasmatales archaeon SG8-52-1	1803816	PRJNA270657	270657	Euryarchaeota	Thermoplasmata	2.06548	31.1	-	LSSD01	79	2005	1877	3/22/16	3/22/16	Contig	University of Texas	SAMN04495909	GCA_001595805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/805/GCA_001595805.1_ASM159580v1	-	-
Euryarchaeota archaeon SM23-78	1803821	PRJNA270657	270657	Euryarchaeota	unclassified Euryarchaeota	1.48083	36.7	-	LSSJ01	47	1585	1509	3/22/16	3/22/16	Contig	University of Texas	SAMN04495915	GCA_001595785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/785/GCA_001595785.1_ASM159578v1	-	-
Theionarchaea archaeon DG-70-1	1803814	PRJNA270657	270657	Euryarchaeota	Theionarchaea	4.77206	41.4	-	LSSC01	194	4531	4270	3/22/16	3/22/16	Contig	University of Texas	SAMN04495908	GCA_001595815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/815/GCA_001595815.1_ASM159581v1	-	-
Theionarchaea archaeon DG-70	1803813	PRJNA270657	270657	Euryarchaeota	Theionarchaea	3.55955	41.7	-	LSSB01	177	3702	3483	3/22/16	3/22/16	Contig	University of Texas	SAMN04495907	GCA_001595795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/795/GCA_001595795.1_ASM159579v1	-	-
Thermoplasmatales archaeon SG8-52-2	1803817	PRJNA270657	270657	Euryarchaeota	Thermoplasmata	1.3559	31.4	-	LSSE01	68	1331	1226	3/22/16	3/22/16	Contig	University of Texas	SAMN04495910	GCA_001595865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/865/GCA_001595865.1_ASM159586v1	-	-
Euryarchaeota archaeon SG8-5	1803822	PRJNA270657	270657	Euryarchaeota	unclassified Euryarchaeota	1.24723	55.5	-	LSSH01	111	1182	1022	3/22/16	3/22/16	Scaffold	University of Texas	SAMN04495912	GCA_001595885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/885/GCA_001595885.1_ASM159588v1	-	-
Thermoplasmatales archaeon SG8-52-4	1803819	PRJNA270657	270657	Euryarchaeota	Thermoplasmata	2.24627	31.6	-	LSSF01	91	2162	2036	3/22/16	3/22/16	Contig	University of Texas	SAMN04495913	GCA_001595875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/875/GCA_001595875.1_ASM159587v1	-	-
Thermoplasmatales archaeon SG8-52-3	1803818	PRJNA270657	270657	Euryarchaeota	Thermoplasmata	1.9094	30.4	-	LSSG01	84	1864	1739	3/22/16	3/22/16	Contig	University of Texas	SAMN04495911	GCA_001595915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/915/GCA_001595915.1_ASM159591v1	-	-
Thermoplasmatales archaeon SM1-50	1803815	PRJNA270657	270657	Euryarchaeota	Thermoplasmata	2.09171	39	-	LSSI01	94	2064	1890	3/22/16	3/22/16	Contig	University of Texas	SAMN04495914	GCA_001595945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/945/GCA_001595945.1_ASM159594v1	-	-
Polynucleobacter sp. QLW-P1DATA-2	1743167	PRJNA278737	278737	Proteobacteria	Betaproteobacteria	2.1721	45.5	-	LZMQ01	15	2175	2038	11/7/16	4/13/17	Contig	University of Innsbruck	SAMN05214352	GCA_001870365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/365/GCA_001870365.1_ASM187036v1	-	QLW-P1DATA-2
Denitrobacterium detoxificans	79604	PRJNA283216	283216	Terrabacteria group	Actinobacteria	2.44625	59.5	chromosome:NZ_CP011402.1/CP011402.1	-	1	2023	1906	5/16/16	4/12/17	Complete Genome	ARS USDA	SAMN03610232	GCA_001643775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/775/GCA_001643775.1_ASM164377v1	-	NPOH1
Bacillus novalis	220687	PRJNA315346	315346	Terrabacteria group	Firmicutes	5.66819	40	-	LUUR01	2	5517	5247	5/3/16	4/12/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04544315	GCA_001636395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/395/GCA_001636395.1_ASM163639v1	-	FJAT-14227
Desulfotomaculum intricatum	1285191	PRJDB3957	285865	Terrabacteria group	Firmicutes	2.98106	40.5	-	BCWE01	66	3036	2850	3/1/16	4/12/17	Contig	National Institute of Technology and Evaluation Biological Resource Center	SAMD00046891	GCA_001592105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/105/GCA_001592105.1_ASM159210v1	-	NBRC 109411
Caldimonas taiwanensis NBRC 104434	1349753	PRJDB1337	231393	Proteobacteria	Betaproteobacteria	3.44881	66	-	BCWK01	98	3259	3143	3/4/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00047218	GCA_001592165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/165/GCA_001592165.1_ASM159216v1	-	NBRC 104434
Bergeriella denitrificans NBRC 102155	1349758	PRJDB1342	231398	Proteobacteria	Betaproteobacteria	2.3239	55.8	-	BCWL01	393	2203	2102	3/4/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00047216	GCA_001592185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/185/GCA_001592185.1_ASM159218v1	-	NBRC 102155
Synechococcus sp. WH 8103	29410	PRJEB8389	275399	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.42969	59.5	chromosome 1:NZ_LN847356.1/LN847356.1	-	1	2602	2492	7/9/15	4/17/17	Complete Genome	STATION BIOLOGIQUE DE ROSCOFF (CNRS - UPMC) - UMR7144 - MAPP TEAM	SAMEA3233744	GCA_001182765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/765/GCA_001182765.1_WH8103.1	-	-
Castellaniella caeni NBRC 101664	1349760	PRJDB1344	231400	Proteobacteria	Betaproteobacteria	3.28222	65	-	BCWN01	60	3055	2946	3/4/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00047219	GCA_001592225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/225/GCA_001592225.1_ASM159222v1	-	NBRC 101664
Cupriavidus oxalaticus NBRC 13593	1349762	PRJDB1346	231402	Proteobacteria	Betaproteobacteria	6.64496	66.9	-	BCWO01	65	6003	5824	3/4/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046921	GCA_001592245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/245/GCA_001592245.1_ASM159224v1	-	NBRC 13593
Curvibacter delicatus NBRC 14919	1349763	PRJDB1347	231404	Proteobacteria	Betaproteobacteria	3.75576	63.5	-	BCWP01	108	3626	3488	3/4/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00047220	GCA_001592265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/265/GCA_001592265.1_ASM159226v1	-	NBRC 14919
Hydrogenophaga pseudoflava NBRC 102511	1349792	PRJDB1377	231433	Proteobacteria	Betaproteobacteria	4.50079	67.3	-	BCWQ01	43	4296	4197	3/4/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00047221	GCA_001592285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/285/GCA_001592285.1_ASM159228v1	-	NBRC 102511
Hydrogenophaga taeniospiralis NBRC 102512	1349793	PRJDB1378	231434	Proteobacteria	Betaproteobacteria	5.27533	66.7	-	BCWR01	53	4923	4813	3/4/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00047222	GCA_001592305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/305/GCA_001592305.1_ASM159230v1	-	NBRC 102512
Serratia sp. FS14	1327989	PRJNA198771	198771	Proteobacteria	Gammaproteobacteria	5.24988	59.5	chromosome:NZ_CP005927.1/CP005927.1	-	1	4918	4668	5/27/14	4/9/17	Complete Genome	Nanjing Agricultural University Bioinformatics Center	SAMN03081466	GCA_000695995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/995/GCA_000695995.1_ASM69599v1	25856195	FS14
Flavobacterium seoulense	1492738	PRJNA248341	248341	FCB group	Bacteroidetes/Chlorobi group	3.79264	33.2	-	JNCA01	56	3208	3123	5/27/14	4/9/17	Contig	"ChunLab, Inc"	SAMN02797833	GCA_000695795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/795/GCA_000695795.1_ASM69579v1	25584140	EM1321
Trueperella pyogenes	1661	PRJNA241373	241373	Terrabacteria group	Actinobacteria	2.33839	59.5	chromosome:NZ_CP007519.1/CP007519.1	-	1	2124	2037	4/2/14	4/2/17	Complete Genome	Cornell University	SAMN02689492	GCA_000612055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/055/GCA_000612055.1_ASM61205v1	24786956	TP6375
Pseudoalteromonas telluritireducens	162160	PRJNA315588	315588	Proteobacteria	Gammaproteobacteria	4.40632	40.9	-	LVCM01	65	3947	3374	3/23/16	3/23/16	Contig	"Institute of Oceanology, Chinese Academy of Sciences"	SAMN04566107	GCA_001596795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/795/GCA_001596795.1_ASM159679v1	-	DSM 16098
Pseudoalteromonas spiralis	162157	PRJNA315590	315590	Proteobacteria	Gammaproteobacteria	4.16651	40.2	-	LVCN01	87	3824	3395	3/23/16	3/23/16	Contig	"Institute of Oceanology, Chinese Academy of Sciences"	SAMN04566108	GCA_001596815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/815/GCA_001596815.1_ASM159681v1	-	DSM 16099
Tatumella saanichensis	480813	PRJNA207548	207548	Proteobacteria	Gammaproteobacteria	3.31862	51.3	-	ATMI01	56	3178	2989	7/23/13	4/17/17	Contig	Public Health Agency of Canada	SAMN02199362	GCA_000439375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/375/GCA_000439375.1_06-3099_v1	25807976	NML 06-3099
Vibrio renipiscarius	1461322	PRJNA265934	265934	Proteobacteria	Gammaproteobacteria	4.33972	45.2	-	JTKH01	30	3926	3755	1/23/15	4/10/17	Scaffold	University of Valencia	SAMN03176898	GCA_000827885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/827/885/GCA_000827885.1_ASM82788v1	25767236	DCR 1-4-2
Acinetobacter dijkshoorniae	1561081	PRJNA294956	294956	Proteobacteria	Gammaproteobacteria	3.90573	38.8242	plasmid pNDM-JVAP01:NZ_KM923969.1/KM923969.1	LJPG01	93	3748	3515	3/22/16	4/10/17	Scaffold	ISGlobal	SAMN04038486	GCA_001595745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/745/GCA_001595745.2_ASM159574v2	-	JVAP01
Nocardia arizonensis	1141647	PRJNA291477	291477	Terrabacteria group	Actinobacteria	7.19846	67.9	-	LGYZ01	133	6537	6251	10/13/15	4/11/17	Contig	DSMZ	SAMN03944864	GCA_001310275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/275/GCA_001310275.1_ASM131027v1	26427857	W9405
Rickettsia endosymbiont of Proechinophthirus fluctus	1462733	PRJNA238474	238474	Proteobacteria	Alphaproteobacteria	1.25355	32.4	-	LECS01	5	1508	1114	3/30/16	4/17/17	Scaffold	University of Florida	SAMN02644695	GCA_001602635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/635/GCA_001602635.1_ASM160263v1	-	SPI-2
Sodalis-like endosymbiont of Proechinophthirus fluctus	1462730	PRJNA238473	238473	Proteobacteria	Gammaproteobacteria	2.1789	49.1	-	LECR01	92	1918	1287	3/30/16	3/30/16	Scaffold	University of Florida	SAMN02644694	GCA_001602625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/625/GCA_001602625.1_ASM160262v1	-	SPI-1
Methanosarcinales archaeon Methan_01	1674798	PRJNA284316	284316	Euryarchaeota	Methanomicrobia	2.6088	59.1	-	LUYE01	85	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837483	GCA_001602645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/645/GCA_001602645.1_ASM160264v1	-	-
Methanomicrobiales archaeon Methan_05	1674802	PRJNA284316	284316	Euryarchaeota	Methanomicrobia	1.84465	52.5	-	LUYI01	386	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837487	GCA_001602685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/685/GCA_001602685.1_ASM160268v1	-	-
Actinomycetales bacterium Actino_01	1674805	PRJNA284316	284316	Terrabacteria group	Actinobacteria	3.55454	73.9	-	LUYL01	53	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837490	GCA_001602705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/705/GCA_001602705.1_ASM160270v1	-	-
Methanomicrobiales archaeon Methan_06	1674803	PRJNA284316	284316	Euryarchaeota	Methanomicrobia	1.61691	48	-	LUYJ01	427	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837488	GCA_001602695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/695/GCA_001602695.1_ASM160269v1	-	-
Rhodobacterales bacterium Alpha_01	1674810	PRJNA284316	284316	Proteobacteria	Alphaproteobacteria	3.85692	68.1	-	LUYN01	128	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837492	GCA_001602745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/745/GCA_001602745.1_ASM160274v1	-	-
Rhizobiales bacterium Alpha_03	1674812	PRJNA284316	284316	Proteobacteria	Alphaproteobacteria	6.25855	60.6	-	LUYP01	160	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837494	GCA_001602765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/765/GCA_001602765.1_ASM160276v1	-	-
Bacteroidales bacterium Bact_03	1674817	PRJNA284316	284316	FCB group	Bacteroidetes/Chlorobi group	3.16653	41.6	-	LUYU01	63	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837499	GCA_001602795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/795/GCA_001602795.1_ASM160279v1	-	-
Bacteroidales bacterium Bact_01	1674815	PRJNA284316	284316	FCB group	Bacteroidetes/Chlorobi group	2.08898	45.2	-	LUYS01	493	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837497	GCA_001602775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/775/GCA_001602775.1_ASM160277v1	-	-
Bacteroidales bacterium Bact_05	1674819	PRJNA284316	284316	FCB group	Bacteroidetes/Chlorobi group	2.84751	48.5	-	LUYW01	263	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837501	GCA_001602805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/805/GCA_001602805.1_ASM160280v1	-	-
Bacteroidales bacterium Bact_13	1674827	PRJNA284316	284316	FCB group	Bacteroidetes/Chlorobi group	2.09615	58.6	-	LUZE01	178	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837509	GCA_001602845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/845/GCA_001602845.1_ASM160284v1	-	-
Bacteroidales bacterium Bact_14	1674828	PRJNA284316	284316	FCB group	Bacteroidetes/Chlorobi group	1.09178	61.5	-	LUZF01	84	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837510	GCA_001602865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/865/GCA_001602865.1_ASM160286v1	-	-
Bacteroidales bacterium Bact_16	1674830	PRJNA284316	284316	FCB group	Bacteroidetes/Chlorobi group	1.62326	62.7	-	LUZH01	347	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837512	GCA_001602885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/885/GCA_001602885.1_ASM160288v1	-	-
Burkholderiales bacterium Beta_02	1674888	PRJNA284316	284316	Proteobacteria	Betaproteobacteria	2.82336	63.7	-	LUZR01	161	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837522	GCA_001602895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/895/GCA_001602895.1_ASM160289v1	-	-
Chlorobiales bacterium Clorobi_01	1674889	PRJNA284316	284316	FCB group	Bacteroidetes/Chlorobi group	2.31743	56.2	-	LUZT01	21	-	-	3/30/16	3/30/16	Contig	University of Queensland	SAMN03837524	GCA_001602925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/925/GCA_001602925.1_ASM160292v1	-	-
Campylobacterales bacterium Epsilon_01	1674898	PRJNA284316	284316	Proteobacteria	delta/epsilon subdivisions	2.71433	43.9	-	LVAC01	26	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837533	GCA_001602955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/955/GCA_001602955.1_ASM160295v1	-	-
Caldilineales bacterium Chloro_01	1674890	PRJNA284316	284316	Terrabacteria group	Chloroflexi	2.60597	66.9	-	LUZU01	313	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837525	GCA_001602945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/945/GCA_001602945.1_ASM160294v1	-	-
Clostridiales bacterium Firm_02	1674840	PRJNA284316	284316	Terrabacteria group	Firmicutes	1.28987	49.2	-	LVAH01	78	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837538	GCA_001602975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/975/GCA_001602975.1_ASM160297v1	-	-
Clostridiales bacterium Firm_04	1674842	PRJNA284316	284316	Terrabacteria group	Firmicutes	3.54063	54.1	-	LVAJ01	53	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837540	GCA_001603005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/005/GCA_001603005.1_ASM160300v1	-	-
Clostridiales bacterium Firm_10	1674848	PRJNA284316	284316	Terrabacteria group	Firmicutes	2.72098	62.4	-	LVAP01	179	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837546	GCA_001603025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/025/GCA_001603025.1_ASM160302v1	-	-
Clostridiales bacterium Firm_13	1674851	PRJNA284316	284316	Terrabacteria group	Firmicutes	1.67774	51.6	-	LVAS01	67	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837549	GCA_001603035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/035/GCA_001603035.1_ASM160303v1	-	-
Phycisphaerales bacterium Planc_01	1674905	PRJNA284316	284316	PVC group	Planctomycetes	5.65214	62.8	-	LVBB01	162	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837558	GCA_001603075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/075/GCA_001603075.1_ASM160307v1	-	-
Victivallales bacterium Lenti_02	1674903	PRJNA284316	284316	PVC group	Lentisphaerae	4.9517	67.3	-	LVAZ01	662	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837556	GCA_001603055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/055/GCA_001603055.1_ASM160305v1	-	-
Spirochaetales bacterium Spiro_03	1674859	PRJNA284316	284316	Spirochaetes	Spirochaetia	2.341	56	-	LVBE01	238	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837561	GCA_001603105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/105/GCA_001603105.1_ASM160310v1	-	-
Spirochaetales bacterium Spiro_05	1674861	PRJNA284316	284316	Spirochaetes	Spirochaetia	2.31925	52.3	-	LVBG01	69	-	-	3/30/16	3/30/16	Contig	University of Queensland	SAMN03837563	GCA_001603115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/115/GCA_001603115.1_ASM160311v1	-	-
Spirochaetales bacterium Spiro_07	1674863	PRJNA284316	284316	Spirochaetes	Spirochaetia	2.6943	44.7	-	LVBI01	68	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837565	GCA_001603145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/145/GCA_001603145.1_ASM160314v1	-	-
Spirochaetales bacterium Spiro_12	1674868	PRJNA284316	284316	Spirochaetes	Spirochaetia	2.30994	57.1	-	LVBN01	139	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837570	GCA_001603165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/165/GCA_001603165.1_ASM160316v1	-	-
Methanosarcinales archaeon Methan_03	1674800	PRJNA284316	284316	Euryarchaeota	Methanomicrobia	1.99988	55.6	-	LUYG01	772	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837485	GCA_001603205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/205/GCA_001603205.1_ASM160320v1	-	-
Methanosarcinales archaeon Methan_04	1674801	PRJNA284316	284316	Euryarchaeota	Methanomicrobia	1.92773	53.4	-	LUYH01	292	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837486	GCA_001603225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/225/GCA_001603225.1_ASM160322v1	-	-
Methanosarcinales archaeon Methan_02	1674799	PRJNA284316	284316	Euryarchaeota	Methanomicrobia	2.47589	60.8	-	LUYF01	419	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837484	GCA_001603195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/195/GCA_001603195.1_ASM160319v1	-	-
Actinomycetales bacterium Actino_02	1674809	PRJNA284316	284316	Terrabacteria group	Actinobacteria	3.05313	67.6	-	LUYM01	31	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837491	GCA_001603275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/275/GCA_001603275.1_ASM160327v1	-	-
Thermotogales bacterium Thermo_02	1674911	PRJNA284316	284316	Thermotogae	Thermotogae	3.24967	47	-	LVBU01	643	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837577	GCA_001603185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/185/GCA_001603185.1_ASM160318v1	-	-
Rhodobacterales bacterium Alpha_02	1674811	PRJNA284316	284316	Proteobacteria	Alphaproteobacteria	3.55539	67.7	-	LUYO01	259	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837493	GCA_001603295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/295/GCA_001603295.1_ASM160329v1	-	-
Methanomicrobiales archaeon Methan_07	1674804	PRJNA284316	284316	Euryarchaeota	Methanomicrobia	1.91314	61.5	-	LUYK01	414	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837489	GCA_001603255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/255/GCA_001603255.1_ASM160325v1	-	-
Rhizobiales bacterium Alpha_04	1674813	PRJNA284316	284316	Proteobacteria	Alphaproteobacteria	2.67688	60.6	-	LUYQ01	409	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837495	GCA_001603325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/325/GCA_001603325.1_ASM160332v1	-	-
Rhodospirillales bacterium Alpha_05	1674814	PRJNA284316	284316	Proteobacteria	Alphaproteobacteria	2.84718	66.9	-	LUYR01	628	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837496	GCA_001603335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/335/GCA_001603335.1_ASM160333v1	-	-
Bacteroidales bacterium Bact_02	1674816	PRJNA284316	284316	FCB group	Bacteroidetes/Chlorobi group	4.09732	41.5	-	LUYT01	97	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837498	GCA_001603365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/365/GCA_001603365.1_ASM160336v1	-	-
Bacteroidales bacterium Bact_04	1674818	PRJNA284316	284316	FCB group	Bacteroidetes/Chlorobi group	2.62451	40.3	-	LUYV01	314	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837500	GCA_001603385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/385/GCA_001603385.1_ASM160338v1	-	-
Bacteroidales bacterium Bact_06	1674820	PRJNA284316	284316	FCB group	Bacteroidetes/Chlorobi group	2.19298	44.7	-	LUYX01	734	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837502	GCA_001603405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/405/GCA_001603405.1_ASM160340v1	-	-
Bacteroidales bacterium Bact_08	1674822	PRJNA284316	284316	FCB group	Bacteroidetes/Chlorobi group	1.88208	33.6	-	LUYZ01	169	-	-	3/30/16	3/30/16	Contig	University of Queensland	SAMN03837504	GCA_001603425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/425/GCA_001603425.1_ASM160342v1	-	-
Bacteroidales bacterium Bact_09	1674823	PRJNA284316	284316	FCB group	Bacteroidetes/Chlorobi group	1.93464	46.6	-	LUZA01	165	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837505	GCA_001603455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/455/GCA_001603455.1_ASM160345v1	-	-
Bacteroidales bacterium Bact_07	1674821	PRJNA284316	284316	FCB group	Bacteroidetes/Chlorobi group	2.45466	42.3	-	LUYY01	360	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837503	GCA_001603415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/415/GCA_001603415.1_ASM160341v1	-	-
Bacteroidales bacterium Bact_10	1674824	PRJNA284316	284316	FCB group	Bacteroidetes/Chlorobi group	2.75474	46	-	LUZB01	201	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837506	GCA_001603485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/485/GCA_001603485.1_ASM160348v1	-	-
Bacteroidales bacterium Bact_11	1674825	PRJNA284316	284316	FCB group	Bacteroidetes/Chlorobi group	1.88361	58	-	LUZC01	105	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837507	GCA_001603505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/505/GCA_001603505.1_ASM160350v1	-	-
Bacteroidales bacterium Bact_12	1674826	PRJNA284316	284316	FCB group	Bacteroidetes/Chlorobi group	1.14607	59.3	-	LUZD01	230	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837508	GCA_001603525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/525/GCA_001603525.1_ASM160352v1	-	-
Bacteroidales bacterium Bact_17	1674831	PRJNA284316	284316	FCB group	Bacteroidetes/Chlorobi group	1.22209	55.1	-	LUZI01	88	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837513	GCA_001603555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/555/GCA_001603555.1_ASM160355v1	-	-
Bacteroidales bacterium Bact_15	1674829	PRJNA284316	284316	FCB group	Bacteroidetes/Chlorobi group	1.7382	54.4	-	LUZG01	659	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837511	GCA_001603535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/535/GCA_001603535.1_ASM160353v1	-	-
Bacteroidales bacterium Bact_19	1674833	PRJNA284316	284316	FCB group	Bacteroidetes/Chlorobi group	3.0693	32.1	-	LUZK01	186	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837515	GCA_001603595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/595/GCA_001603595.1_ASM160359v1	-	-
Bacteroidales bacterium Bact_18	1674832	PRJNA284316	284316	FCB group	Bacteroidetes/Chlorobi group	2.40839	35.4	-	LUZJ01	398	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837514	GCA_001603565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/565/GCA_001603565.1_ASM160356v1	-	-
Bacteroidales bacterium Bact_20	1674834	PRJNA284316	284316	FCB group	Bacteroidetes/Chlorobi group	1.50121	29.1	-	LUZL01	269	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837516	GCA_001603615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/615/GCA_001603615.1_ASM160361v1	-	-
Bacteroidales bacterium Bact_21	1674835	PRJNA284316	284316	FCB group	Bacteroidetes/Chlorobi group	1.40045	29.4	-	LUZM01	376	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837517	GCA_001603625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/625/GCA_001603625.1_ASM160362v1	-	-
Bacteroidales bacterium Bact_22	1674836	PRJNA284316	284316	FCB group	Bacteroidetes/Chlorobi group	2.06467	47	-	LUZN01	83	-	-	3/30/16	3/30/16	Contig	University of Queensland	SAMN03837518	GCA_001603665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/665/GCA_001603665.1_ASM160366v1	-	-
Bacteroidales bacterium Bact_24	1674838	PRJNA284316	284316	FCB group	Bacteroidetes/Chlorobi group	2.83633	42.8	-	LUZP01	260	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837520	GCA_001603695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/695/GCA_001603695.1_ASM160369v1	-	-
Bacteroidales bacterium Bact_23	1674837	PRJNA284316	284316	FCB group	Bacteroidetes/Chlorobi group	3.73502	48.2	-	LUZO01	677	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837519	GCA_001603685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/685/GCA_001603685.1_ASM160368v1	-	-
Burkholderiales bacterium Beta_01	1674887	PRJNA284316	284316	Proteobacteria	Betaproteobacteria	3.29844	63	-	LUZQ01	149	-	-	3/30/16	3/30/16	Contig	University of Queensland	SAMN03837521	GCA_001603715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/715/GCA_001603715.1_ASM160371v1	-	-
Cloacimonetes bacterium WWEI_01	1674914	PRJNA284316	284316	FCB group	Candidatus Cloacimonetes	1.84794	36.4	-	LUZS01	136	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837523	GCA_001603745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/745/GCA_001603745.1_ASM160374v1	-	-
Anaerolineales bacterium Chloro_03	1674892	PRJNA284316	284316	Terrabacteria group	Chloroflexi	1.81734	53	-	LUZW01	240	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837527	GCA_001603775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/775/GCA_001603775.1_ASM160377v1	-	-
Deferribacterales bacterium Deferri_01	1674894	PRJNA284316	284316	Deferribacteres	Deferribacteres	2.85134	44.4	-	LUZY01	14	-	-	3/30/16	3/30/16	Contig	University of Queensland	SAMN03837529	GCA_001603805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/805/GCA_001603805.1_ASM160380v1	-	-
Anaerolineales bacterium Chloro_04	1674893	PRJNA284316	284316	Terrabacteria group	Chloroflexi	2.60278	48.2	-	LUZX01	554	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837528	GCA_001603795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/795/GCA_001603795.1_ASM160379v1	-	-
Anaerolineales bacterium Chloro_02	1674891	PRJNA284316	284316	Terrabacteria group	Chloroflexi	1.82574	52.5	-	LUZV01	324	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837526	GCA_001603765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/765/GCA_001603765.1_ASM160376v1	-	-
Syntrophobacterales bacterium Delta_03	1674897	PRJNA284316	284316	Proteobacteria	delta/epsilon subdivisions	3.16393	61.5	-	LVAB01	760	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837532	GCA_001603855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/855/GCA_001603855.1_ASM160385v1	-	-
Syntrophobacterales bacterium Delta_01	1674895	PRJNA284316	284316	Proteobacteria	delta/epsilon subdivisions	4.29303	59.7	-	LUZZ01	525	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837530	GCA_001603845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/845/GCA_001603845.1_ASM160384v1	-	-
Fibrobacterales bacterium Fibro_01	1674899	PRJNA284316	284316	FCB group	Fibrobacteres	2.82948	37.4	-	LVAD01	50	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837534	GCA_001603875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/875/GCA_001603875.1_ASM160387v1	-	-
Fibrobacterales bacterium Fibro_02	1674900	PRJNA284316	284316	FCB group	Fibrobacteres	3.23421	51.4	-	LVAE01	122	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837535	GCA_001603905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/905/GCA_001603905.1_ASM160390v1	-	-
Fibrobacterales bacterium Fibro_03	1674901	PRJNA284316	284316	FCB group	Fibrobacteres	3.60217	50.2	-	LVAF01	189	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837536	GCA_001603925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/925/GCA_001603925.1_ASM160392v1	-	-
Clostridiales bacterium Firm_03	1674841	PRJNA284316	284316	Terrabacteria group	Firmicutes	2.37723	39.5	-	LVAI01	684	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837539	GCA_001603945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/945/GCA_001603945.1_ASM160394v1	-	-
Syntrophobacterales bacterium Delta_02	1674896	PRJNA284316	284316	Proteobacteria	delta/epsilon subdivisions	4.02843	56.8	-	LVAA01	285	-	-	3/30/16	3/30/16	Contig	University of Queensland	SAMN03837531	GCA_001603955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/955/GCA_001603955.1_ASM160395v1	-	-
Clostridiales bacterium Firm_06	1674844	PRJNA284316	284316	Terrabacteria group	Firmicutes	4.21046	44.5	-	LVAL01	215	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837542	GCA_001603985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/603/985/GCA_001603985.1_ASM160398v1	-	-
Clostridiales bacterium Firm_07	1674845	PRJNA284316	284316	Terrabacteria group	Firmicutes	1.65902	55.5	-	LVAM01	61	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837543	GCA_001604005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/005/GCA_001604005.1_ASM160400v1	-	-
Clostridiales bacterium Firm_01	1674839	PRJNA284316	284316	Terrabacteria group	Firmicutes	1.43852	47.2	-	LVAG01	511	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837537	GCA_001604025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/025/GCA_001604025.1_ASM160402v1	-	-
Clostridiales bacterium Firm_08	1674846	PRJNA284316	284316	Terrabacteria group	Firmicutes	1.71767	55.2	-	LVAN01	70	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837544	GCA_001604045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/045/GCA_001604045.1_ASM160404v1	-	-
Clostridiales bacterium Firm_09	1674847	PRJNA284316	284316	Terrabacteria group	Firmicutes	1.43931	48.1	-	LVAO01	32	-	-	3/30/16	3/30/16	Contig	University of Queensland	SAMN03837545	GCA_001604065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/065/GCA_001604065.1_ASM160406v1	-	-
Clostridiales bacterium Firm_05	1674843	PRJNA284316	284316	Terrabacteria group	Firmicutes	2.96756	45.7	-	LVAK01	265	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837541	GCA_001604035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/035/GCA_001604035.1_ASM160403v1	-	-
Clostridiales bacterium Firm_11	1674849	PRJNA284316	284316	Terrabacteria group	Firmicutes	3.4352	55.2	-	LVAQ01	45	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837547	GCA_001604105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/105/GCA_001604105.1_ASM160410v1	-	-
Clostridiales bacterium Firm_12	1674850	PRJNA284316	284316	Terrabacteria group	Firmicutes	1.61587	61.2	-	LVAR01	143	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837548	GCA_001604115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/115/GCA_001604115.1_ASM160411v1	-	-
Clostridiales bacterium Firm_14	1674852	PRJNA284316	284316	Terrabacteria group	Firmicutes	3.12353	46.3	-	LVAT01	45	-	-	3/30/16	3/30/16	Contig	University of Queensland	SAMN03837550	GCA_001604135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/135/GCA_001604135.1_ASM160413v1	-	-
Clostridiales bacterium Firm_15	1674853	PRJNA284316	284316	Terrabacteria group	Firmicutes	1.55835	50	-	LVAU01	194	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837551	GCA_001604165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/165/GCA_001604165.1_ASM160416v1	-	-
Clostridiales bacterium Firm_16	1674854	PRJNA284316	284316	Terrabacteria group	Firmicutes	3.72315	49.3	-	LVAV01	117	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837552	GCA_001604185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/185/GCA_001604185.1_ASM160418v1	-	-
Clostridiales bacterium Firm_18	1674856	PRJNA284316	284316	Terrabacteria group	Firmicutes	2.10973	41.4	-	LVAX01	109	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837554	GCA_001604215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/215/GCA_001604215.1_ASM160421v1	-	-
Clostridiales bacterium Firm_17	1674855	PRJNA284316	284316	Terrabacteria group	Firmicutes	1.9493	49.3	-	LVAW01	630	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837553	GCA_001604195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/195/GCA_001604195.1_ASM160419v1	-	-
Victivallales bacterium Lenti_03	1674904	PRJNA284316	284316	PVC group	Lentisphaerae	2.73955	54.8	-	LVBA01	780	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837557	GCA_001604255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/255/GCA_001604255.1_ASM160425v1	-	-
Spirochaetales bacterium Spiro_01	1674857	PRJNA284316	284316	Spirochaetes	Spirochaetia	1.59947	50.9	-	LVBC01	345	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837559	GCA_001604265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/265/GCA_001604265.1_ASM160426v1	-	-
Spirochaetales bacterium Spiro_02	1674858	PRJNA284316	284316	Spirochaetes	Spirochaetia	2.61141	55	-	LVBD01	74	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837560	GCA_001604275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/275/GCA_001604275.1_ASM160427v1	-	-
Lentisphaerales bacterium Lenti_01	1674902	PRJNA284316	284316	PVC group	Lentisphaerae	2.25631	60.9	-	LVAY01	729	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837555	GCA_001604235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/235/GCA_001604235.1_ASM160423v1	-	-
Spirochaetales bacterium Spiro_04	1674860	PRJNA284316	284316	Spirochaetes	Spirochaetia	1.74754	59.3	-	LVBF01	227	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837562	GCA_001604325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/325/GCA_001604325.1_ASM160432v1	-	-
Spirochaetales bacterium Spiro_06	1674862	PRJNA284316	284316	Spirochaetes	Spirochaetia	1.83992	51.9	-	LVBH01	592	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837564	GCA_001604335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/335/GCA_001604335.1_ASM160433v1	-	-
Spirochaetales bacterium Spiro_08	1674864	PRJNA284316	284316	Spirochaetes	Spirochaetia	2.83471	52.1	-	LVBJ01	57	-	-	3/30/16	3/30/16	Contig	University of Queensland	SAMN03837566	GCA_001604355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/355/GCA_001604355.1_ASM160435v1	-	-
Spirochaetales bacterium Spiro_09	1674865	PRJNA284316	284316	Spirochaetes	Spirochaetia	2.72255	51	-	LVBK01	83	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837567	GCA_001604385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/385/GCA_001604385.1_ASM160438v1	-	-
Spirochaetales bacterium Spiro_10	1674866	PRJNA284316	284316	Spirochaetes	Spirochaetia	2.88224	61.8	-	LVBL01	164	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837568	GCA_001604405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/405/GCA_001604405.1_ASM160440v1	-	-
Synergistales bacterium Syner_01	1674906	PRJNA284316	284316	Synergistetes	Synergistia	3.06756	58.9	-	LVBO01	683	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837571	GCA_001604435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/435/GCA_001604435.1_ASM160443v1	-	-
Synergistales bacterium Syner_02	1674907	PRJNA284316	284316	Synergistetes	Synergistia	1.93509	59.9	-	LVBP01	305	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837572	GCA_001604445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/445/GCA_001604445.1_ASM160444v1	-	-
Synergistales bacterium Syner_03	1674908	PRJNA284316	284316	Synergistetes	Synergistia	1.90923	52	-	LVBQ01	218	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837573	GCA_001604475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/475/GCA_001604475.1_ASM160447v1	-	-
Spirochaetales bacterium Spiro_11	1674867	PRJNA284316	284316	Spirochaetes	Spirochaetia	1.87713	59.9	-	LVBM01	616	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837569	GCA_001604425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/425/GCA_001604425.1_ASM160442v1	-	-
Entomoplasmatales bacterium Tener_02	1674919	PRJNA284316	284316	Terrabacteria group	Tenericutes	0.984333	38.7	-	LVBS01	260	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837575	GCA_001604505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/505/GCA_001604505.1_ASM160450v1	-	-
Acholeplasmatales bacterium Tener_01	1674909	PRJNA284316	284316	Terrabacteria group	Tenericutes	0.885702	31.8	-	LVBR01	194	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837574	GCA_001604495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/495/GCA_001604495.1_ASM160449v1	-	-
Thermotogales bacterium Thermo_01	1674910	PRJNA284316	284316	Thermotogae	Thermotogae	2.49092	48.6	-	LVBT01	416	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837576	GCA_001604545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/545/GCA_001604545.1_ASM160454v1	-	-
Puniceicoccales bacterium Verruco_01	1674912	PRJNA284316	284316	PVC group	Verrucomicrobia	2.50495	63	-	LVBV01	61	-	-	3/30/16	3/30/16	Contig	University of Queensland	SAMN03837578	GCA_001604565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/565/GCA_001604565.1_ASM160456v1	-	-
Puniceicoccales bacterium Verruco_02	1674913	PRJNA284316	284316	PVC group	Verrucomicrobia	2.69812	58.8	-	LVBW01	101	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837579	GCA_001604585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/585/GCA_001604585.1_ASM160458v1	-	-
Verrucomicrobia bacterium Verruco_03	1674915	PRJNA284316	284316	PVC group	Verrucomicrobia	1.49659	47.5	-	LVBX01	54	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837580	GCA_001604605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/605/GCA_001604605.1_ASM160460v1	-	-
Verrucomicrobia bacterium Verruco_04	1674916	PRJNA284316	284316	PVC group	Verrucomicrobia	1.52286	53.5	-	LVBY01	42	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837581	GCA_001604625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/625/GCA_001604625.1_ASM160462v1	-	-
Verrucomicrobia bacterium Verruco_05	1674917	PRJNA284316	284316	PVC group	Verrucomicrobia	2.35316	65.2	-	LVBZ01	216	-	-	3/30/16	3/30/16	Scaffold	University of Queensland	SAMN03837582	GCA_001604645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/645/GCA_001604645.1_ASM160464v1	-	-
Oceanivirga salmonicida	1769291	PRJNA305231	305231	Fusobacteria	Fusobacteriia	1.76858	25.4	-	LOQI01	247	1750	1592	1/19/16	4/11/17	Scaffold	Robert Koch Institute	SAMN04320974	GCA_001517915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/915/GCA_001517915.1_ASM151791v1	-	AVG 2115
Serratia marcescens subsp. marcescens Db11	273526	PRJEB4201	230300	Proteobacteria	Gammaproteobacteria	5.1138	59.5	chromosome I:NZ_HG326223.1/HG326223.1	-	1	4848	4678	11/26/13	3/24/17	Complete Genome	WTSI	SAMEA3138834	GCA_000513215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/215/GCA_000513215.1_DB11	25070509	Db11
Cupriavidus nantongensis	1796606	PRJNA315593	315593	Proteobacteria	Betaproteobacteria	7.13642	66.6959	chromosome 1:NZ_CP014844.1/CP014844.1; chromosome 2:NZ_CP014845.1/CP014845.1; plasmid unnamed:NZ_CP014846.1/CP014846.1	-	3	6560	6372	3/28/16	4/12/17	Chromosome	Anhui Agricultural University	SAMN04566111	GCA_001598055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/055/GCA_001598055.1_ASM159805v1	-	X1
Moraxella oblonga NBRC 102422	1349775	PRJDB1360	231416	Proteobacteria	Gammaproteobacteria	2.42539	41	-	BCYQ01	107	2416	2310	3/11/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046722	GCA_001598275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/275/GCA_001598275.1_ASM159827v1	-	NBRC 102422
Idiomarina atlantica	1517416	PRJNA253896	253896	Proteobacteria	Gammaproteobacteria	2.70311	50.2	-	JPIN01	49	2581	2499	9/9/14	4/9/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02910054	GCA_000753735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/735/GCA_000753735.1_ASM75373v1	25417054	MCCC 1A10513
Phaeobacter gallaeciensis	60890	PRJNA273449	273449	Proteobacteria	Alphaproteobacteria	4.46319	59.4997	chromosome:CP010588.1; plasmid pP11_a:CP010589.1; plasmid pP11_b:CP010590.1; plasmid pP11_c:CP010591.1; plasmid pP11_d:CP010592.1; plasmid pP11_e:CP010593.1; plasmid pP11_f:CP010594.1	-	7	4354	4275	9/27/17	9/27/17	Complete Genome	Leibniz Institute DSMZ	SAMN03292294	GCA_002381305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/305/GCA_002381305.1_ASM238130v1	-	P11
Phaeobacter gallaeciensis	60890	PRJNA273603	273603	Proteobacteria	Alphaproteobacteria	4.59528	59.4935	chromosome:CP010673.1; plasmid pP75_a:CP010674.1; plasmid pP75_b:CP010675.1; plasmid pP75_c:CP010676.1; plasmid pP75_d:CP010677.1; plasmid pP75_e:CP010678.1; plasmid pP75_f:CP010679.1; plasmid pP75_g:CP010680.1	-	8	4511	4432	9/27/17	9/27/17	Complete Genome	Leibniz Institute DSMZ	SAMN03294491	GCA_002381285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/285/GCA_002381285.1_ASM238128v1	-	P75
Gluconobacter albidus	318683	PRJNA311264	311264	Proteobacteria	Alphaproteobacteria	3.3693	59.4897	chromosome:NZ_CP014689.1/CP014689.1; plasmid pGS1191_1:NZ_CP014690.1/CP014690.1	-	2	3122	2976	2/22/17	2/24/17	Complete Genome	Technische Universitaet Muenchen	SAMN04396919	GCA_002005485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/485/GCA_002005485.1_ASM200548v1	-	TMW2.1191
Rhizobium etli 8C-3	538025	PRJNA293876	293876	Proteobacteria	Alphaproteobacteria	7.30912	59.4876	chromosome:NZ_CP017241.1/CP017241.1; plasmid pRsp8C3a:NZ_CP017242.1/CP017242.1; plasmid pRsp8C3b:NZ_CP017243.1/CP017243.1; plasmid pRsp8C3c:NZ_CP017244.1/CP017244.1	-	4	7103	6720	12/19/16	4/6/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN04017682	GCA_001908375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/375/GCA_001908375.1_ASM190837v1	-	8C-3
Enterococcus pernyi	590158	PRJNA305785	305785	Terrabacteria group	Firmicutes	3.18857	38.4	-	LPVT01	9	3031	2793	3/29/16	4/17/17	Scaffold	Shenyang Agriculture University	SAMN04347624	GCA_001601555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/555/GCA_001601555.1_ASM160155v1	-	Shenyang
Thermovenabulum gondwanense	520767	PRJNA304771	304771	Terrabacteria group	Firmicutes	2.2828	38	-	LOHZ01	47	2313	2188	3/29/16	4/17/17	Contig	Griffith University	SAMN04309253	GCA_001601575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/575/GCA_001601575.1_ASM160157v1	-	R270
Geobacter metallireducens GS-15	269799	PRJNA177	177	Proteobacteria	delta/epsilon subdivisions	4.01118	59.476	chromosome:NC_007517.1/CP000148.1; plasmid unnamed:NC_007515.1/CP000149.1	-	2	3635	3539	10/27/05	4/6/17	Complete Genome	DOE Joint Genome Institute	SAMN02598399	GCA_000012925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/925/GCA_000012925.1_ASM1292v1	19473543	GS-15
Methanoculleus horonobensis	528314	PRJDB4449	309282	Euryarchaeota	Methanomicrobia	2.44611	62	-	BCNY01	15	2473	2375	1/19/16	4/17/17	Contig	"Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST)"	SAMD00044723	GCA_001602375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/375/GCA_001602375.1_ASM160237v1	27034500	T10
Spirochaeta lutea	1480694	PRJNA242681	242681	Spirochaetes	Spirochaetia	3.53291	53.8	-	JNUP01	72	2996	2910	9/25/14	4/9/17	Scaffold	JNTU Hyderabad	SAMN02708690	GCA_000758165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/165/GCA_000758165.1_Spiroch1.0	25487950	JC230
Pseudomonas donghuensis	1163398	PRJNA89717	89717	Proteobacteria	Gammaproteobacteria	5.64603	62.4	-	AJJP01	64	5239	4954	4/18/12	5/19/17	Scaffold	"College of Life Sciences, Wuhan University"	SAMN02472130	GCA_000259195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/195/GCA_000259195.1_LF10417_PSEudwD	22815441	HYS
Serratia marcescens	615	PRJNA357595	357595	Proteobacteria	Gammaproteobacteria	5.45786	59.4653	chromosome:NZ_CP018917.1/CP018917.1; plasmid unnamed2:NZ_CP018918.1/CP018918.1	-	2	5258	5051	7/18/17	7/21/17	Complete Genome	University of Michigan	SAMN06164059	GCA_002220635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/635/GCA_002220635.1_ASM222063v1	28536292	UMH5
Magnetospira sp. QH-2	1288970	PRJEB1386	237144	Proteobacteria	Alphaproteobacteria	4.05237	59.4647	chromosome:NZ_FO538765.1/FO538765.1; plasmid MGMAQ_p:NZ_FO538766.1/FO538766.1	-	2	3802	3693	2/2/14	4/10/17	Complete Genome	Genoscope CEA	SAMEA3283111	GCA_000968135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/135/GCA_000968135.1_ASM96813v1	23841906	QH-2
Thioclava indica	1353528	PRJNA210305	210305	Proteobacteria	Alphaproteobacteria	3.82207	60.3	-	AUNB01	105	3670	3500	6/27/14	4/9/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02893933	GCA_000714545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/545/GCA_000714545.1_SOAPdenovo_v1.05	25361528	DT23-4
Thioclava atlantica	1317124	PRJNA196741	196741	Proteobacteria	Alphaproteobacteria	3.92844	65.3	-	AQRC01	47	3790	3675	7/31/14	4/9/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02945012	GCA_000737065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/065/GCA_000737065.1_ASM73706v1	25361528	13D2W-2
Photobacterium sanguinicancri	875932	PRJNA301601	301601	Proteobacteria	Gammaproteobacteria	5.31019	43.4	-	LNGM01	93	4769	3704	2/18/16	4/16/17	Contig	"CIAD, A.C."	SAMN04262200	GCA_001563765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/765/GCA_001563765.1_ASM156376v1	27048242	ME15
Rhizobium sp. 10195	2028343	PRJNA399130	399130	Proteobacteria	Alphaproteobacteria	7.07032	59.4551	chromosome:NZ_CP022998.1/CP022998.1; plasmid p10195A:NZ_CP022999.1/CP022999.1; plasmid p10195B:NZ_CP023000.1/CP023000.1	-	3	6729	6512	8/30/17	9/1/17	Complete Genome	University of Alberta	SAMN07522840	GCA_002277895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/895/GCA_002277895.1_ASM227789v1	-	10195
Phaeobacter gallaeciensis	60890	PRJNA273601	273601	Proteobacteria	Alphaproteobacteria	4.54187	59.4384	chromosome:CP010636.1; plasmid pP73_a:CP010637.1; plasmid pP73_b:CP010638.1; plasmid pP73_c:CP010639.1; plasmid pP73_d:CP010640.1; plasmid pP73_e:CP010641.1; plasmid pP73_f:CP010642.1	-	7	4417	4339	9/27/17	9/27/17	Complete Genome	Leibniz Institute DSMZ	SAMN03294489	GCA_002381325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/325/GCA_002381325.1_ASM238132v1	-	P73
Serratia marcescens	615	PRJNA357595	357595	Proteobacteria	Gammaproteobacteria	5.12968	59.4341	chromosome:NZ_CP018915.1/CP018915.1; plasmid unnamed1:NZ_CP018916.1/CP018916.1	-	2	4847	4665	7/18/17	7/21/17	Complete Genome	University of Michigan	SAMN06164056	GCA_002220615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/615/GCA_002220615.1_ASM222061v1	28536292	UMH1
Flavobacterium chilense	946677	PRJNA312778	312778	FCB group	Bacteroidetes/Chlorobi group	5.92451	33.7	-	LSYT01	21	5038	4907	3/30/16	4/12/17	Contig	Lycoming College	SAMN04506025	GCA_001602525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/525/GCA_001602525.1_ASM160252v1	-	LMG 26360
Xanthomonas maliensis	1321368	PRJNA196946	196946	Proteobacteria	Gammaproteobacteria	4.96557	66.7	-	AQPR01	1285	4371	3783	5/23/13	4/8/17	Contig	Colorado State University	SAMN02469646	GCA_000401255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/255/GCA_000401255.1_Xanthomonas_sp._97M	25588569	M97
Phaeobacter gallaeciensis	60890	PRJNA273593	273593	Proteobacteria	Alphaproteobacteria	4.61009	59.42	chromosome:CP010784.1; plasmid pP63_a:CP010785.1; plasmid pP63_b:CP010786.1; plasmid pP63_c:CP010787.1; plasmid pP63_d:CP010788.1; plasmid pP63_e:CP010789.1; plasmid pP63_f:CP010790.1; plasmid pP63_x_draft:CP010791.1	-	8	4502	4423	9/28/17	9/28/17	Complete Genome	Leibniz Institute DSMZ	SAMN03294483	GCA_002393525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/525/GCA_002393525.1_ASM239352v1	-	P63
Phaeobacter gallaeciensis DSM 26640	1423144	PRJNA227502	227502	Proteobacteria	Alphaproteobacteria	4.54016	59.4193	chromosome:NC_023137.1/CP006966.1; plasmid pGal_A255:NC_023138.1/CP006967.1; plasmid pGal_B134:NC_023148.1/CP006968.1; plasmid pGal_C110:NC_023139.1/CP006969.1; plasmid pGal_D78:NC_023140.1/CP006970.1; plasmid pGal_E78:NC_023141.1/CP006971.1; plasmid pGal_F69:NC_023142.1/CP006972.1; plasmid pGal_G40:NC_023143.1/CP006973.1	-	8	4389	4288	12/20/13	4/9/17	Complete Genome	DSMZ	SAMN02641497	GCA_000511385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/385/GCA_000511385.1_ASM51138v1	-	DSM 26640
Anaerosporomusa subterranea	1794912	PRJNA310872	310872	Terrabacteria group	Firmicutes	3.96819	47.1	-	LSGP01	28	3755	3627	4/5/16	4/12/17	Contig	"Rutgers, The State University of New Jersey"	SAMN04455719	GCA_001611555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/555/GCA_001611555.1_ASM161155v1	-	RU4
Ammonifex degensii KC4	429009	PRJNA12390	12390	Terrabacteria group	Firmicutes	2.15707	59.4168	chromosome:NC_013385.1/CP001785.1; plasmid pADEG01:NC_013386.1/CP001786.1	-	2	2236	2121	10/8/09	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598268	GCA_000024605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/605/GCA_000024605.1_ASM2460v1	-	KC4
Modestobacter caceresii	1522368	PRJNA255356	255356	Terrabacteria group	Actinobacteria	4.95365	73.6	-	JPMX01	139	4732	4495	10/1/14	4/9/17	Scaffold	"Institute of Biology, Leiden University"	SAMN02918181	GCA_000761485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/485/GCA_000761485.1_ASM76148v1	-	KNN 45-2b
Mycobacterium houstonense	146021	PRJEB13221	317076	Terrabacteria group	Actinobacteria	6.38393	67	-	FJVO01	197	6482	5720	4/1/16	4/17/17	Contig	URMITE	SAMEA3913388	GCA_900078665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/665/GCA_900078665.1_PRJEB13221	-	type strain: ATCC 49403
Nocardia amikacinitolerans NBRC 108937	1379680	PRJDB1424	231445	Terrabacteria group	Actinobacteria	7.6459	68.5	-	BDAU01	108	6788	6522	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00040644	GCA_001612615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/615/GCA_001612615.1_ASM161261v1	-	NBRC 108937
Nocardia crassostreae	53428	PRJDB4074	290875	Terrabacteria group	Actinobacteria	8.29315	67.7	-	BDCH01	57	7758	6972	4/1/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00040648	GCA_001613405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/405/GCA_001613405.1_ASM161340v1	-	NBRC 100342
Terrimicrobium sacchariphilum	690879	PRJDB4647	314971	PVC group	Verrucomicrobia	4.75181	60.2	-	BDCO01	3	4204	4126	3/30/16	6/28/17	Contig	Terrimicrobium sacchariphilum NM-5	SAMD00048637	GCA_001613545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/545/GCA_001613545.1_ASM161354v1	-	NM-5
Marinobacter nitratireducens	1137280	PRJNA178951	178951	Proteobacteria	Gammaproteobacteria	3.89003	56.7	-	ANIE01	22	3524	3461	6/13/14	4/9/17	Contig	Institute of Microbial Technology	SAMN02854799	GCA_000708045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/045/GCA_000708045.1_Marinobacter_sp._AK21	-	AK21
Pseudomonas frederiksbergensis	104087	PRJNA406849	406849	Proteobacteria	Gammaproteobacteria	6.5958	59.4	chromosome:CP023466.1	-	1	6050	5799	9/25/17	9/25/17	Complete Genome	"Shin's Lab., Kyungpook National University"	SAMN07632931	GCA_002355315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/315/GCA_002355315.1_ASM235531v1	-	KNU-15
Escherichia marmotae	1499973	PRJNA247449	247449	Proteobacteria	Gammaproteobacteria	4.5059	50.3	-	JNBP01	130	4548	4137	12/23/14	5/17/17	Scaffold	National institute for communicable disease control and prevention China CDC	SAMN02777259	GCA_000807695.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/695/GCA_000807695.3_ASM80769v3	-	HT073016
Methanoculleus sediminis	1550566	PRJNA273166	273166	Euryarchaeota	Methanomicrobia	2.48972	62.3	-	JXOJ01	15	2493	2410	6/1/15	4/10/17	Scaffold	National Chung Hsing University	SAMN03288802	GCA_001017125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/125/GCA_001017125.1_ASM101712v1	25855623	S3Fa
Halofilum ochraceum	1611323	PRJNA314916	314916	Proteobacteria	Gammaproteobacteria	3.6443	65.8	-	LVEG02	35	3294	3214	4/8/16	4/13/17	Contig	Shandong University at Weihai	SAMN04545454	GCA_001614315.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/315/GCA_001614315.2_ASM161431v2	-	XJ16
Dermatophilus congolensis	1863	PRJEB6403	251923	Terrabacteria group	Actinobacteria	2.62782	59.4	chromosome 1:NZ_LT906453.1/LT906453.1	-	1	2302	2200	8/15/17	8/28/17	Complete Genome	SC	SAMEA4475696	GCA_900187045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/045/GCA_900187045.1_51485_B01	-	NCTC13039
Oceanobacillus damuensis	937928	PRJNA308041	308041	Terrabacteria group	Firmicutes	4.11884	39.3	-	LQNF01	73	3943	3798	4/8/16	4/17/17	Scaffold	Sichuan University	SAMN04387706	GCA_001618145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/145/GCA_001618145.1_ASM161814v1	-	PT-20
Oceanibaculum pacificum	580166	PRJNA305775	305775	Proteobacteria	Alphaproteobacteria	3.89143	65.7	-	LPXN01	181	3724	3597	4/8/16	4/17/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN04332636	GCA_001618175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/175/GCA_001618175.1_ASM161817v1	-	MCCC 1A02656
Erythrobacter luteus	1581420	PRJNA280925	280925	Proteobacteria	Alphaproteobacteria	2.88722	67.2	-	LBHB01	22	2830	2757	5/20/15	4/10/17	Contig	The Third Institute of State Oceanic Administration	SAMN03480690	GCA_001010945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/945/GCA_001010945.1_ASM101094v1	25911535	KA37
Bradyrhizobium embrapense	630921	PRJNA287423	287423	Proteobacteria	Alphaproteobacteria	8.26783	64	-	LFIP02	36	7722	7404	7/30/15	4/17/17	Contig	Embrapa Soja	SAMN03782074	GCA_001189235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/235/GCA_001189235.2_ASM118923v2	26362866	SEMIA 6208
Bradyrhizobium tropiciagri	312253	PRJNA287624	287624	Proteobacteria	Alphaproteobacteria	9.76731	63.5	-	LFLZ01	189	-	-	7/31/15	12/24/15	Contig	Embrapa Soja	SAMN03784761	GCA_001189845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/845/GCA_001189845.1_ASM118984v1	"2,403,188,226,679,590"	SEMIA 6148
Paludibacter jiangxiensis	681398	PRJDB4691	316425	FCB group	Bacteroidetes/Chlorobi group	3.66488	42.9	-	BDCR01	4	2954	2878	4/6/16	6/28/17	Contig	"Biomedical Research Institute, National Institute of Advanced Industrial Science and Technology (AIST),Japan"	SAMD00049477	GCA_001618385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/385/GCA_001618385.1_ASM161838v1	-	NM7
Arcobacter lanthieri	1355374	PRJNA235329	235329	Proteobacteria	delta/epsilon subdivisions	2.28777	26.7	-	JARU01	29	2289	2190	3/3/14	4/9/17	Contig	Agriculture and Agri-Food Canada	SAMN02951874	GCA_000585115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/115/GCA_000585115.1_Arcobacter_lanthierii_AF1440	"2,483,114,325,977,280"	AF1440
Shewanella mangrovi	1515746	PRJNA253757	253757	Proteobacteria	Gammaproteobacteria	4.21579	48.1	-	JPEO01	49	3789	3676	9/10/14	4/9/17	Contig	85303	SAMN02887322	GCA_000753795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/795/GCA_000753795.1_ASM75379v1	25957050	YQH10
Serratia marcescens	615	PRJNA357595	357595	Proteobacteria	Gammaproteobacteria	5.30863	59.4	chromosome:NZ_CP018924.1/CP018924.1	-	1	5047	4854	7/18/17	7/21/17	Complete Genome	University of Michigan	SAMN06164057	GCA_002220515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/515/GCA_002220515.1_ASM222051v1	28536292	UMH2
candidate division Hyd24-12 bacterium Dam_1	1729713	PRJNA280491	280491	unclassified Bacteria	Bacteria candidate phyla	2.18198	63.8	-	LKHB01	247	2119	1872	4/12/16	4/12/16	Contig	Aalborg University	SAMN04120647	GCA_001618615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/615/GCA_001618615.1_ASM161861v1	27058503	-
candidate division Hyd24-12 bacterium Ran_1	1729714	PRJNA280491	280491	unclassified Bacteria	Bacteria candidate phyla	2.01329	64.2	-	LKHC01	168	1893	1710	4/12/16	4/12/16	Contig	Aalborg University	SAMN04120648	GCA_001618605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/605/GCA_001618605.1_ASM161860v1	27058503	-
candidate division Hyd24-12 bacterium Vib_1	1729715	PRJNA280491	280491	unclassified Bacteria	Bacteria candidate phyla	2.18824	63.7	-	LKHD01	224	2075	1821	4/12/16	4/12/16	Contig	Aalborg University	SAMN04120649	GCA_001618625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/625/GCA_001618625.1_ASM161862v1	27058503	-
Mycobacterium interjectum	33895	PRJNA299467	299467	Terrabacteria group	Actinobacteria	5.90384	68.6	-	LQPB01	103	5661	5405	4/20/17	4/22/17	Contig	University of Trento	SAMN04216932	GCA_002102225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/225/GCA_002102225.1_ASM210222v1	-	DSM 44064
Parasaccharibacter apium	1510841	PRJNA301156	301156	Proteobacteria	Alphaproteobacteria	2.01163	59.4	chromosome:NZ_CP020554.1/CP020554.1	-	1	1826	1753	4/5/17	4/8/17	Complete Genome	USDA-ARS	SAMN06649799	GCA_002079945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/945/GCA_002079945.1_ASM207994v1	-	G7_7_3c
Streptobacillus notomytis	1712031	PRJNA294926	294926	Fusobacteria	Fusobacteriia	1.36961	26.4	-	LKKU01	148	1273	1176	12/8/16	4/16/17	Contig	Robert Koch Institute	SAMN04099645	GCA_001902575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/575/GCA_001902575.1_ASM190257v1	-	KWG2
Pseudomonas sp. GR 6-02	1659194	PRJNA284318	284318	Proteobacteria	Gammaproteobacteria	6.50035	59.4	chromosome:NZ_CP011567.1/CP011567.1	-	1	5933	5718	6/3/16	4/12/17	Complete Genome	Chungnam National University	SAMN03701341	GCA_001655615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/615/GCA_001655615.1_ASM165561v1	-	GR 6-02
Micrococcus aloeverae	1391911	PRJNA308994	308994	Terrabacteria group	Actinobacteria	2.4193	73.1	-	LRFD01	76	2222	2100	4/13/16	4/12/17	Contig	University of Malaya	SAMN04419261	GCA_001619895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/895/GCA_001619895.1_ASM161989v1	-	M71
Sphingomonas hankookensis	563996	PRJNA307692	307692	Proteobacteria	Alphaproteobacteria	3.81284	67.1	-	LQQO01	63	3543	3415	4/13/16	4/17/17	Contig	University of Malaya	SAMN04385624	GCA_001619955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/955/GCA_001619955.1_ASM161995v1	-	CN3
Polynucleobacter yangtzensis	1743159	PRJNA277963	277963	Proteobacteria	Betaproteobacteria	2.04521	45.4	-	LOJI01	42	2078	2008	3/22/16	4/12/17	Scaffold	University of Innsbruck	SAMN03400177	GCA_001595965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/965/GCA_001595965.1_ASM159596v1	-	MWH-JaK3
Polynucleobacter sinensis	1743157	PRJNA295472	295472	Proteobacteria	Betaproteobacteria	2.31806	45.5	-	LOJJ01	19	2370	2296	3/22/16	4/12/17	Scaffold	University of Innsbruck	SAMN04074796	GCA_001595985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/985/GCA_001595985.1_ASM159598v1	-	MWH-HuW1
Bifidobacterium longum subsp. infantis	1682	PRJNA270905	270905	Terrabacteria group	Actinobacteria	2.57811	59.4	chromosome:NZ_CP010411.1/CP010411.1	-	1	2308	2042	9/14/15	4/10/17	Complete Genome	Yonsei University	SAMN03271683	GCA_001281305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/305/GCA_001281305.1_ASM128130v1	-	BT1
Corynebacterium camporealensis	161896	PRJNA276036	276036	Terrabacteria group	Actinobacteria	2.45181	59.4	chromosome:NZ_CP011311.1/CP011311.1	-	1	2288	2168	4/24/15	4/10/17	Complete Genome	Bielefeld University	SAMN03365263	GCA_000980815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/815/GCA_000980815.1_ASM98081v1	26021938	DSM 44610
Pseudomonas fluorescens	294	PRJNA277915	277915	Proteobacteria	Gammaproteobacteria	6.6942	59.4	chromosome:NZ_CP011117.1/CP011117.1	-	1	6183	5881	4/2/15	4/3/17	Complete Genome	Universite de Moncton	SAMN03398829	GCA_000968415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/415/GCA_000968415.1_ASM96841v1	25953163	LBUM223
Bifidobacterium angulatum DSM 20098 = JCM 7096	518635	PRJDB55	279559	Terrabacteria group	Actinobacteria	2.02197	59.4	chromosome:NZ_AP012322.1/AP012322.1	-	1	1625	1520	3/24/15	4/10/17	Complete Genome	"Graduate School of Frontier Sciences, University of Tokyo"	SAMD00061039	GCA_001025155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/155/GCA_001025155.1_ASM102515v1	-	JCM 7096
Amycolatopsis keratiniphila	129921	PRJEB16467	349389	Terrabacteria group	Actinobacteria	9.47262	68.8	chromosome I:NZ_LT629789.1/LT629789.1	-	1	8771	8552	10/21/16	4/17/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489733	GCA_900105855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/855/GCA_900105855.1_IMG-taxon_2634166275_annotated_assembly	-	FH 1893
Tardiphaga sp. OK246	1855307	PRJEB21431	391641	Proteobacteria	Alphaproteobacteria	6.74863	61.4	-	FZOX01	19	6346	6165	7/13/17	7/21/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216374	GCA_900188215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/215/GCA_900188215.1_IMG-taxon_2609459765_annotated_assembly	-	OK246
Synechococcus sp. WH 8102	84588	PRJNA230	230	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.43443	59.4	chromosome:NC_005070.1/BX548020.1	-	1	2630	2513	8/14/03	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMEA3138327	GCA_000195975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/975/GCA_000195975.1_ASM19597v1	12917641	WH 8102
Crenobacter luteus	1452487	PRJNA308067	308067	Proteobacteria	Betaproteobacteria	2.85903	68.3	-	LQQU01	60	2806	2702	4/13/16	4/12/17	Contig	University of Malaya	SAMN04386424	GCA_001619695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/695/GCA_001619695.1_ASM161969v1	-	CN10
Serratia marcescens	615	PRJNA357595	357595	Proteobacteria	Gammaproteobacteria	5.22172	59.3	chromosome:NZ_CP018929.1/CP018929.1	-	1	4936	4759	7/18/17	7/21/17	Complete Genome	University of Michigan	SAMN06164065	GCA_002220575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/575/GCA_002220575.1_ASM222057v1	28536292	UMH11
Pseudovibrio axinellae	989403	PRJEB16991	351113	Proteobacteria	Alphaproteobacteria	5.13199	50.3	-	FOFM01	93	4710	4520	10/29/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421798	GCA_900110875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/875/GCA_900110875.1_IMG-taxon_2684622848_annotated_assembly	-	DSM 24994
Acidimicrobiia bacterium REDSEA-S21_B10	1811600	PRJNA289734	289734	Terrabacteria group	Actinobacteria	1.72669	71.4	-	LUNA01	328	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534550	GCA_001626125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/125/GCA_001626125.1_ASM162612v1	27377622	-
Acidimicrobiia bacterium REDSEA-S33_B8N9	1811601	PRJNA289734	289734	Terrabacteria group	Actinobacteria	2.14939	71.5	-	LUNB01	262	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534551	GCA_001626165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/165/GCA_001626165.1_ASM162616v1	27377622	-
Actinobacteria bacterium REDSEA-S36_B12	1811596	PRJNA289734	289734	Terrabacteria group	Actinobacteria	1.37003	62.5	-	LUND01	255	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534553	GCA_001626195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/195/GCA_001626195.1_ASM162619v1	27377622	-
Moraxellaceae bacterium REDSEA-S45_B11	1811617	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	1.70718	42	-	LUOW01	287	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534598	GCA_001626575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/575/GCA_001626575.1_ASM162657v1	27377622	-
Candidatus Marinimicrobia bacterium REDSEA-S14_B6	1811603	PRJNA289734	289734	FCB group	Candidatus Marinimicrobia	1.43248	54.3	-	LUOC01	234	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534578	GCA_001626655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/655/GCA_001626655.1_ASM162665v1	27377622	-
Candidatus Marinimicrobia bacterium REDSEA-S15_B13	1811605	PRJNA289734	289734	FCB group	Candidatus Marinimicrobia	1.47813	41.8	-	LUOE01	201	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534580	GCA_001626675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/675/GCA_001626675.1_ASM162667v1	27377622	-
Candidatus Marinimicrobia bacterium REDSEA-S15_B10	1811604	PRJNA289734	289734	FCB group	Candidatus Marinimicrobia	1.64933	54.1	-	LUOD01	233	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534579	GCA_001626685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/685/GCA_001626685.1_ASM162668v1	27377622	-
Candidatus Marinimicrobia bacterium REDSEA-S39_B11	1811609	PRJNA289734	289734	FCB group	Candidatus Marinimicrobia	1.09056	54.6	-	LUOI01	225	-	-	4/22/16	7/27/16	Contig	King Abdullah University of Science and Technology	SAMN04534584	GCA_001626695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/695/GCA_001626695.1_ASM162669v1	27377622	-
Candidatus Marinimicrobia bacterium REDSEA-S27_B1N12	1811606	PRJNA289734	289734	FCB group	Candidatus Marinimicrobia	1.36288	51.4	-	LUOF01	280	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534581	GCA_001626725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/725/GCA_001626725.1_ASM162672v1	27377622	-
Candidatus Marinimicrobia bacterium REDSEA-S33_B13	1811607	PRJNA289734	289734	FCB group	Candidatus Marinimicrobia	1.27168	54.3	-	LUOG01	264	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534582	GCA_001626755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/755/GCA_001626755.1_ASM162675v1	27377622	-
Candidatus Marinimicrobia bacterium REDSEA-S38_B13	1811608	PRJNA289734	289734	FCB group	Candidatus Marinimicrobia	1.15149	41.6	-	LUOH01	217	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534583	GCA_001626845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/845/GCA_001626845.1_ASM162684v1	27377622	-
Candidatus Marinimicrobia bacterium REDSEA-S39_B7	1811610	PRJNA289734	289734	FCB group	Candidatus Marinimicrobia	0.238717	38.1	-	LUOJ01	15	-	-	4/22/16	7/27/16	Contig	King Abdullah University of Science and Technology	SAMN04534585	GCA_001626875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/875/GCA_001626875.1_ASM162687v1	27377622	-
Moraxellaceae bacterium REDSEA-S29_B6	1811611	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	2.2263	41.9	-	LUOQ01	154	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534592	GCA_001626895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/895/GCA_001626895.1_ASM162689v1	27377622	-
Moraxellaceae bacterium REDSEA-S32_B1	1811612	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	2.38485	42.1	-	LUOR01	80	-	-	4/22/16	7/27/16	Contig	King Abdullah University of Science and Technology	SAMN04534593	GCA_001626925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/925/GCA_001626925.1_ASM162692v1	27377622	-
Moraxellaceae bacterium REDSEA-S35_B9	1811613	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	1.60343	41.9	-	LUOS01	306	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534594	GCA_001626975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/975/GCA_001626975.1_ASM162697v1	27377622	-
Moraxellaceae bacterium REDSEA-S42_B15	1811615	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	1.88171	41.9	-	LUOU01	270	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534596	GCA_001626995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/995/GCA_001626995.1_ASM162699v1	27377622	-
Moraxellaceae bacterium REDSEA-S44_B2	1811616	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	2.35174	42	-	LUOV01	95	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534597	GCA_001627035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/035/GCA_001627035.1_ASM162703v1	27377622	-
Moraxellaceae bacterium REDSEA-S38_B3	1811614	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	2.41155	42	-	LUOT01	100	-	-	4/22/16	7/27/16	Contig	King Abdullah University of Science and Technology	SAMN04534595	GCA_001627135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/135/GCA_001627135.1_ASM162713v1	27377622	-
Rhodobacteraceae bacterium REDSEA-S11_B6	1811622	PRJNA289734	289734	Proteobacteria	Alphaproteobacteria	1.89232	39.6	-	LUQA01	192	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534628	GCA_001627215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/215/GCA_001627215.1_ASM162721v1	27377622	-
Rhodobacteraceae bacterium REDSEA-S02_B3	1811619	PRJNA289734	289734	Proteobacteria	Alphaproteobacteria	2.07088	39.7	-	LUPX01	113	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534625	GCA_001627375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/375/GCA_001627375.1_ASM162737v1	27377622	-
Rhodobacteraceae bacterium REDSEA-S03_B4	1811620	PRJNA289734	289734	Proteobacteria	Alphaproteobacteria	2.02655	39.7	-	LUPY01	202	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534626	GCA_001627595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/595/GCA_001627595.1_ASM162759v1	27377622	-
Rhodobacteraceae bacterium REDSEA-S29_B10	1811623	PRJNA289734	289734	Proteobacteria	Alphaproteobacteria	1.7923	40	-	LUQB01	357	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534629	GCA_001627635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/635/GCA_001627635.1_ASM162763v1	27377622	-
SAR116 cluster bacterium REDSEA-S10_B10N8	1811626	PRJNA289734	289734	Proteobacteria	Alphaproteobacteria	1.58122	62.9	-	LUQE01	247	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534632	GCA_001627655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/655/GCA_001627655.1_ASM162765v1	27377622	-
SAR324 cluster bacterium REDSEA-S11_B7	1811632	PRJNA289734	289734	Proteobacteria	delta/epsilon subdivisions	2.53825	47.5	-	LUQJ01	416	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534638	GCA_001627675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/675/GCA_001627675.1_ASM162767v1	27377622	-
SAR324 cluster bacterium REDSEA-S06_B4	1811628	PRJNA289734	289734	Proteobacteria	delta/epsilon subdivisions	1.72639	47.2	-	LUQG01	373	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534634	GCA_001627685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/685/GCA_001627685.1_ASM162768v1	27377622	-
SAR116 cluster bacterium REDSEA-S02_B12	1811625	PRJNA289734	289734	Proteobacteria	Alphaproteobacteria	1.51449	63	-	LUQD01	247	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534631	GCA_001627705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/705/GCA_001627705.1_ASM162770v1	27377622	-
SAR324 cluster bacterium REDSEA-S33_B4	1811638	PRJNA289734	289734	Proteobacteria	delta/epsilon subdivisions	3.11535	42.8	-	LUQP01	94	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534644	GCA_001627735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/735/GCA_001627735.1_ASM162773v1	27377622	-
SAR324 cluster bacterium REDSEA-S15_B6	1811634	PRJNA289734	289734	Proteobacteria	delta/epsilon subdivisions	2.78997	42.4	-	LUQL01	191	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534640	GCA_001627755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/755/GCA_001627755.1_ASM162775v1	27377622	-
SAR324 cluster bacterium REDSEA-S08_B7	1811629	PRJNA289734	289734	Proteobacteria	delta/epsilon subdivisions	2.12085	43.3	-	LUQH01	328	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534635	GCA_001627765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/765/GCA_001627765.1_ASM162776v1	27377622	-
SAR324 cluster bacterium REDSEA-S09_B3	1811630	PRJNA289734	289734	Proteobacteria	delta/epsilon subdivisions	3.35395	42.8	-	LUQI01	83	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534636	GCA_001627795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/795/GCA_001627795.1_ASM162779v1	27377622	-
SAR324 cluster bacterium REDSEA-S21_B5	1811635	PRJNA289734	289734	Proteobacteria	delta/epsilon subdivisions	3.05195	42.9	-	LUQM01	128	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534641	GCA_001627815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/815/GCA_001627815.1_ASM162781v1	27377622	-
SAR324 cluster bacterium REDSEA-S39_B5	1811640	PRJNA289734	289734	Proteobacteria	delta/epsilon subdivisions	3.0367	43	-	LUQR01	266	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534646	GCA_001627835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/835/GCA_001627835.1_ASM162783v1	27377622	-
SAR324 cluster bacterium REDSEA-S45_B3	1811641	PRJNA289734	289734	Proteobacteria	delta/epsilon subdivisions	3.16723	42.9	-	LUQS01	89	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534647	GCA_001627845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/845/GCA_001627845.1_ASM162784v1	27377622	-
SAR324 cluster bacterium REDSEA-S27_B3	1811637	PRJNA289734	289734	Proteobacteria	delta/epsilon subdivisions	3.30278	42.8	-	LUQO01	80	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534643	GCA_001627865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/865/GCA_001627865.1_ASM162786v1	27377622	-
SAR324 cluster bacterium REDSEA-S36_B13	1811639	PRJNA289734	289734	Proteobacteria	delta/epsilon subdivisions	1.36953	46.9	-	LUQQ01	323	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534645	GCA_001627895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/895/GCA_001627895.1_ASM162789v1	27377622	-
SAR324 cluster bacterium REDSEA-S05_B4	1811627	PRJNA289734	289734	Proteobacteria	delta/epsilon subdivisions	1.75111	46.8	-	LUQF01	357	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534633	GCA_001627915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/915/GCA_001627915.1_ASM162791v1	27377622	-
Rhodobacteraceae bacterium REDSEA-S34_B6	1811624	PRJNA289734	289734	Proteobacteria	Alphaproteobacteria	2.41387	40.4	-	LUQC01	111	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534630	GCA_001627925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/925/GCA_001627925.1_ASM162792v1	27377622	-
SAR324 cluster bacterium REDSEA-S26_B7	1811636	PRJNA289734	289734	Proteobacteria	delta/epsilon subdivisions	2.25668	42.5	-	LUQN01	415	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534642	GCA_001627955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/955/GCA_001627955.1_ASM162795v1	27377622	-
SAR324 cluster bacterium REDSEA-S14_B10	1811633	PRJNA289734	289734	Proteobacteria	delta/epsilon subdivisions	1.95216	42.4	-	LUQK01	455	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534639	GCA_001627975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/975/GCA_001627975.1_ASM162797v1	27377622	-
SAR86 cluster bacterium REDSEA-S08_B3	1811642	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	1.55965	37	-	LUQT01	177	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534648	GCA_001627995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/995/GCA_001627995.1_ASM162799v1	27377622	-
SAR86 cluster bacterium REDSEA-S09_B4	1811643	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	1.67205	37	-	LUQU01	107	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534649	GCA_001628005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/005/GCA_001628005.1_ASM162800v1	27377622	-
SAR86 cluster bacterium REDSEA-S21_B7	1811645	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	1.51655	37	-	LUQW01	187	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534651	GCA_001628035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/035/GCA_001628035.1_ASM162803v1	27377622	-
SAR86 cluster bacterium REDSEA-S20_B12N4	1811644	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	1.70289	38.3	-	LUQV01	364	-	-	4/22/16	7/27/16	Contig	King Abdullah University of Science and Technology	SAMN04534650	GCA_001628075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/075/GCA_001628075.1_ASM162807v1	27377622	-
SAR86 cluster bacterium REDSEA-S45_B6	1811648	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	1.57206	37	-	LUQZ01	123	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534654	GCA_001628185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/185/GCA_001628185.1_ASM162818v1	27377622	-
Candidatus Thioglobus sp. REDSEA-S03_B1	1811593	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	1.57781	38.4	-	LURM01	97	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534667	GCA_001628345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/345/GCA_001628345.1_ASM162834v1	27377622	-
Nitrosopelagicus sp. REDSEA-S37_B6	1811588	PRJNA289734	289734	TACK group	Thaumarchaeota	0.870512	34	-	LUPD01	104	-	-	4/22/16	7/27/16	Contig	King Abdullah University of Science and Technology	SAMN04534605	GCA_001627095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/095/GCA_001627095.1_ASM162709v1	27377622	-
Marine group II euryarchaeote REDSEA-S03_B6	1811649	PRJNA289734	289734	Euryarchaeota	unclassified Euryarchaeota	1.31535	45.5	-	LURP01	210	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534670	GCA_001628435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/435/GCA_001628435.1_ASM162843v1	27377622	-
Marine group II euryarchaeote REDSEA-S10_B2	1811650	PRJNA289734	289734	Euryarchaeota	unclassified Euryarchaeota	1.23466	50.4	-	LURQ01	29	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534671	GCA_001628455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/455/GCA_001628455.1_ASM162845v1	27377622	-
Marine group II euryarchaeote REDSEA-S19_B7N8	1811652	PRJNA289734	289734	Euryarchaeota	unclassified Euryarchaeota	1.17169	52	-	LURS01	155	-	-	4/22/16	7/27/16	Contig	King Abdullah University of Science and Technology	SAMN04534673	GCA_001628475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/475/GCA_001628475.1_ASM162847v1	27377622	-
Marine group II euryarchaeote REDSEA-S11_B3N4	1811651	PRJNA289734	289734	Euryarchaeota	unclassified Euryarchaeota	1.29599	51	-	LURR01	35	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534672	GCA_001628485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/485/GCA_001628485.1_ASM162848v1	27377622	-
Acidimicrobiia bacterium REDSEA-S20_B6	1811599	PRJNA289734	289734	Terrabacteria group	Actinobacteria	1.75716	71.4	-	LUMZ01	338	-	-	4/22/16	7/27/16	Contig	King Abdullah University of Science and Technology	SAMN04534549	GCA_001628575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/575/GCA_001628575.1_ASM162857v1	27377622	-
Acidimicrobiia bacterium REDSEA-S14_B4	1811598	PRJNA289734	289734	Terrabacteria group	Actinobacteria	2.0985	71.6	-	LUMY01	257	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534548	GCA_001628595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/595/GCA_001628595.1_ASM162859v1	27377622	-
Acidimicrobiia bacterium REDSEA-S09_B7	1811597	PRJNA289734	289734	Terrabacteria group	Actinobacteria	2.02117	71.6	-	LUMX01	226	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534547	GCA_001628605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/605/GCA_001628605.1_ASM162860v1	27377622	-
Serratia marcescens	615	PRJNA357595	357595	Proteobacteria	Gammaproteobacteria	5.19681	59.3	chromosome:NZ_CP018930.1/CP018930.1	-	1	4951	4767	7/18/17	7/21/17	Complete Genome	University of Michigan	SAMN06164066	GCA_002220595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/595/GCA_002220595.1_ASM222059v1	28536292	UMH12
Marine group II euryarchaeote REDSEA-S29_B8N9	1811654	PRJNA289734	289734	Euryarchaeota	unclassified Euryarchaeota	1.1018	50.1	-	LURU01	131	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534675	GCA_001629155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/629/155/GCA_001629155.1_ASM162915v1	27377622	-
Marine group II euryarchaeote REDSEA-S25_B4N5	1811653	PRJNA289734	289734	Euryarchaeota	unclassified Euryarchaeota	1.10357	52.1	-	LURT01	167	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534674	GCA_001629165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/629/165/GCA_001629165.1_ASM162916v1	27377622	-
Marine group II euryarchaeote REDSEA-S37_B2N9	1811656	PRJNA289734	289734	Euryarchaeota	unclassified Euryarchaeota	1.2073	50.5	-	LURW02	83	-	-	4/22/16	7/27/16	Contig	King Abdullah University of Science and Technology	SAMN04534677	GCA_001629185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/629/185/GCA_001629185.2_ASM162918v2	27377622	-
Marine group II euryarchaeote REDSEA-S30_B12	1811655	PRJNA289734	289734	Euryarchaeota	unclassified Euryarchaeota	1.26663	36.9	-	LURV01	137	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534676	GCA_001629205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/629/205/GCA_001629205.1_ASM162920v1	27377622	-
Marine group II euryarchaeote REDSEA-S41_B6	1811658	PRJNA289734	289734	Euryarchaeota	unclassified Euryarchaeota	1.12922	49.9	-	LURY01	122	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534679	GCA_001629245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/629/245/GCA_001629245.1_ASM162924v1	27377622	-
Marine group II euryarchaeote REDSEA-S43_B8	1811660	PRJNA289734	289734	Euryarchaeota	unclassified Euryarchaeota	1.10167	50.2	-	LUSA01	105	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534681	GCA_001629235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/629/235/GCA_001629235.1_ASM162923v1	27377622	-
Marine group II euryarchaeote REDSEA-S42_B7	1811659	PRJNA289734	289734	Euryarchaeota	unclassified Euryarchaeota	1.19131	49.7	-	LURZ01	43	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534680	GCA_001629255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/629/255/GCA_001629255.1_ASM162925v1	27377622	-
Marine group II euryarchaeote REDSEA-S40_B11N13	1811657	PRJNA289734	289734	Euryarchaeota	unclassified Euryarchaeota	1.24088	50.1	-	LURX01	118	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534678	GCA_001629295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/629/295/GCA_001629295.1_ASM162929v1	27377622	-
Gammaproteobacteria bacterium REDSEA-S08_B8	1811662	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	1.21858	51	-	LUSC01	235	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534683	GCA_001629315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/629/315/GCA_001629315.1_ASM162931v1	27377622	-
Gammaproteobacteria bacterium REDSEA-S03_B5	1811661	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	1.16692	38.7	-	LUSB01	129	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534682	GCA_001629325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/629/325/GCA_001629325.1_ASM162932v1	27377622	-
Gammaproteobacteria bacterium REDSEA-S09_B13	1811663	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	2.2804	51.7	-	LUSD01	371	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534684	GCA_001629355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/629/355/GCA_001629355.1_ASM162935v1	27377622	-
Gammaproteobacteria bacterium REDSEA-S12_B4	1811664	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	1.29761	38.8	-	LUSE01	146	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534685	GCA_001629365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/629/365/GCA_001629365.1_ASM162936v1	27377622	-
Gammaproteobacteria bacterium REDSEA-S15_B12	1811666	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	2.90342	52	-	LUSG01	309	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534687	GCA_001629395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/629/395/GCA_001629395.1_ASM162939v1	27377622	-
Gammaproteobacteria bacterium REDSEA-S14_B7	1811665	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	2.4835	52.1	-	LUSF01	348	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534686	GCA_001629415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/629/415/GCA_001629415.1_ASM162941v1	27377622	-
Gammaproteobacteria bacterium REDSEA-S27_B14	1811669	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	1.42626	52	-	LUSJ01	327	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534690	GCA_001629435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/629/435/GCA_001629435.1_ASM162943v1	27377622	-
Gammaproteobacteria bacterium REDSEA-S21_B8	1811667	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	2.71775	52	-	LUSH01	374	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534688	GCA_001629445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/629/445/GCA_001629445.1_ASM162944v1	27377622	-
Gammaproteobacteria bacterium REDSEA-S33_B15	1811670	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	1.52764	52.3	-	LUSK01	372	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534691	GCA_001629475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/629/475/GCA_001629475.1_ASM162947v1	27377622	-
Gammaproteobacteria bacterium REDSEA-S45_B9	1811671	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	2.30897	51.8	-	LUSL01	340	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534692	GCA_001629495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/629/495/GCA_001629495.1_ASM162949v1	27377622	-
Gammaproteobacteria bacterium REDSEA-S26_B10	1811668	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	1.41403	52.1	-	LUSI01	345	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534689	GCA_001629515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/629/515/GCA_001629515.1_ASM162951v1	27377622	-
Bacillus encimensis	1414647	PRJNA312128	312128	Terrabacteria group	Firmicutes	3.96135	44	-	LWDO01	53	3964	3817	4/23/16	4/12/17	Scaffold	CSIR-Institute of Mircrobial Technology	SAMN04494515	GCA_001630115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/630/115/GCA_001630115.1_ASM163011v1	-	SGD-V-25
Hydrotalea flava	714549	PRJEB14091	329620	FCB group	Bacteroidetes/Chlorobi group	1.10685	37.1	-	FLNP01	90	1069	968	7/19/16	4/5/17	Contig	FIOCRUZ-MG	SAMEA4028674	GCA_900089565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/565/GCA_900089565.1_K06	-	-
Clostridium magnum DSM 2767	1121326	PRJNA317552	317552	Terrabacteria group	Firmicutes	6.63493	32.1	-	LWAE01	25	6201	5684	4/19/16	4/12/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04621187	GCA_001623875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/875/GCA_001623875.1_ASM162387v1	27284147	DSM 2767
Oerskovia enterophila	43678	PRJNA309230	309230	Terrabacteria group	Actinobacteria	4.53507	72.4	-	LRIE01	85	3990	3784	4/20/16	4/12/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04427045	GCA_001624335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/624/335/GCA_001624335.1_ASM162433v1	-	VJag
Lewinella sp. 4G2	1803372	PRJNA312051	312051	FCB group	Bacteroidetes/Chlorobi group	5.21366	55.3	-	LVWJ02	21	3881	3761	4/20/16	4/12/17	Contig	The University of Tokyo	SAMN04497911	GCA_001625015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/625/015/GCA_001625015.2_ASM162501v2	-	4G2
Haladaptatus sp. R4	1679489	PRJNA316929	316929	Euryarchaeota	Halobacteria	4.89669	60.2	-	LWHG01	34	4887	4130	4/21/16	4/12/17	Contig	The University of Burdwan	SAMN04592497	GCA_001625445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/625/445/GCA_001625445.1_ASM162544v1	-	R4
Dietzia maris	37915	PRJNA315745	315745	Terrabacteria group	Actinobacteria	3.50537	70.9	-	LVFF01	57	3302	3098	4/25/16	4/17/17	Contig	Jacobs University 	SAMN04543680	GCA_001630765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/630/765/GCA_001630765.1_scaffolds	27284155	DSM 43672
Paenibacillus glucanolyticus	59843	PRJNA309413	309413	Terrabacteria group	Firmicutes	5.89759	49.2	chromosome:NZ_CP015286.1/CP015286.1	-	1	5336	5133	4/26/16	5/29/17	Chromosome	North Carolina State University	SAMN04432816	GCA_001632305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/305/GCA_001632305.1_ASM163230v1	-	5162
Paenibacillus gorillae	1243662	PRJEB622	179331	Terrabacteria group	Firmicutes	6.25797	48.8	-	CBVJ01	167	5734	5320	11/26/13	4/9/17	Contig	URMITE	SAMEA3138837	GCA_000513275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/275/GCA_000513275.1_G1	-	-
Anoxybacillus geothermalis	1490051	PRJNA260743	260743	Terrabacteria group	Firmicutes	6.97598	46.8	-	JYCG01	333	7131	6629	3/5/15	4/10/17	Contig	Los Alamos National Laboratory	SAMN03025781	GCA_000948315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/315/GCA_000948315.1_BFA_5_A	26067952	ATCC BAA-2555
[Pseudomonas] geniculata N1	1167641	PRJNA156719	156719	Proteobacteria	Gammaproteobacteria	4.67848	66.6	-	AJLO02	48	4254	4155	4/12/12	8/22/16	Contig	"State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University"	SAMN02470951	GCA_000258575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/575/GCA_000258575.2_ASM25857v2	22689240	N1
Grimontia celer	1796497	PRJEB12683	314203	Proteobacteria	Gammaproteobacteria	5.60749	48.4	-	FIZX01	108	5129	4925	3/4/16	4/12/17	Contig	UVEG	SAMEA3872802	GCA_900055185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/185/GCA_900055185.1_Grimontia_sp_CECT9029_SPAdes_Prokka	-	CECT 9029
bacterium 2013Ark19i	1561004	PRJEB7439	304961	unclassified Bacteria	unclassified Bacteria (miscellaneous)	2.38684	38.5	-	FKII01	100	1584	1471	4/7/16	8/1/17	Scaffold	Functional Genomics Genter Zurich	SAMEA2826839	GCA_900078745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/745/GCA_900078745.1_2013Arg14A	-	2013Arg14
Clostridiales bacterium CHKCI001	1780378	PRJEB12385	318232	Terrabacteria group	Firmicutes	3.42614	35.8	-	FCNS01	48	3164	2983	4/11/16	8/1/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA3730079	GCA_900045905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/905/GCA_900045905.1_CI1000	-	-
Serratia marcescens	615	PRJNA357595	357595	Proteobacteria	Gammaproteobacteria	5.22171	59.3	chromosome:NZ_CP018928.1/CP018928.1	-	1	4937	4760	7/18/17	7/21/17	Complete Genome	University of Michigan	SAMN06164064	GCA_002220695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/695/GCA_002220695.1_ASM222069v1	28536292	UMH10
Sphingobium barthaii	1054037	PRJDB1457	219518	Proteobacteria	Alphaproteobacteria	4.9166	64.7	-	BATN01	252	43	43	9/20/13	12/25/14	Contig	Japan Agency for Marine-Earth Science and Technology	SAMD00011324	GCA_000474175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/175/GCA_000474175.2_ASM47417v2	24201196	KK22
Rhizobium sp. S41	1869170	PRJNA327265	327265	Proteobacteria	Alphaproteobacteria	5.52437	59.3	chromosome 1:NZ_CP016320.1/CP016320.1; chromosome 2:NZ_CP016433.1/CP016433.1	-	2	5485	5212	7/21/16	4/17/17	Complete Genome	Nanjing Agricultural University	SAMN05323143	GCA_001691455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/455/GCA_001691455.1_ASM169145v1	-	S41
Corynebacterium simulans	146827	PRJNA309522	309522	Terrabacteria group	Actinobacteria	2.5987	59.3	chromosome:NZ_CP014635.1/CP014635.1	-	1	2432	2288	3/10/16	4/12/17	Complete Genome	NHGRI/NIH	SAMN04435330	GCA_001586235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/235/GCA_001586235.1_ASM158623v1	26861018	Wattiau
Croceicoccus sp. H4	1783232	PRJNA309232	309232	Proteobacteria	Alphaproteobacteria	3.60254	62.8	-	LRSE01	74	3480	3370	5/1/16	4/12/17	Contig	Institute of Urban Environment	SAMN04427046	GCA_001634625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/625/GCA_001634625.1_ASM163462v1	-	H4
Oceanibulbus sp. UBA3587	1947006	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.11708	59.8	-	DFMS01	341	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452544	GCA_002376365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/365/GCA_002376365.1_ASM237636v1	28894102	-
Oleiphilus sp. HI0043	1822233	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	5.47276	44.4	-	LWEY01	1975	5069	4392	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580772	GCA_001634935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/935/GCA_001634935.1_ASM163493v1	-	HI0043
Thalassolituus sp. HI0120	1822263	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	5.67471	48.6	-	LWGC01	2071	5088	4424	5/2/16	5/2/16	Contig	Massachusetts Institute of Technology	SAMN04580802	GCA_001635285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/285/GCA_001635285.1_ASM163528v1	-	HI0120
Bordetella ansorpii	288768	PRJEB13149	316956	Proteobacteria	Betaproteobacteria	6.20518	67	-	FKIF01	10	5622	5413	4/7/16	4/12/17	Contig	SC	SAMEA3906486	GCA_900078705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/705/GCA_900078705.1_H050680373	-	H050680373
Trichococcus sp. ES5	872292	PRJEB12706	317992	Terrabacteria group	Firmicutes	3.14192	45.7	-	FJND01	50	2983	2772	4/11/16	4/17/17	Scaffold	WAGENINGEN UNIVERSITY	SAMEA3869529	GCA_900067165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/067/165/GCA_900067165.1_Trichococcus_ES5	-	-
Halioglobus sp. HI00S01	1822214	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	4.58852	57.2	-	LWEE01	415	4231	4099	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580752	GCA_001635445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/445/GCA_001635445.1_ASM163544v1	-	HI00S01
Bifidobacterium angulatum	1683	PRJNA278963	278963	Terrabacteria group	Actinobacteria	2.06464	59.3	chromosome:NZ_CP014241.1/CP014241.1	-	1	1677	1574	2/22/16	4/12/17	Complete Genome	Vavilov Institute of General Genetics	SAMN03435124	GCA_000966445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/445/GCA_000966445.2_ASM96644v2	26139716	GT102
Bacillus nakamurai	1793963	PRJNA299292	299292	Terrabacteria group	Firmicutes	3.68928	45.3	-	LSAZ01	45	3873	3580	3/9/16	4/12/17	Contig	NCAUR-ARS-USDA	SAMN04450409	GCA_001584325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/325/GCA_001584325.1_ASM158432v1	-	NRRL B-41091
Bacillus mesonae	1193713	PRJNA315345	315345	Terrabacteria group	Firmicutes	5.80773	40.3	-	LUUQ01	2	5553	5309	5/3/16	4/17/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04544314	GCA_001636315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/315/GCA_001636315.1_ASM163631v1	27313309	FJAT-13985
Bacillus horneckiae	549687	PRJNA315340	315340	Terrabacteria group	Firmicutes	4.13159	37.4	-	LUUN01	5	4018	3825	5/3/16	4/17/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04544310	GCA_001636335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/335/GCA_001636335.1_ASM163633v1	-	FJAT-2351
Bacillus eiseniae	762947	PRJNA315341	315341	Terrabacteria group	Firmicutes	5.47108	37.6	-	LUUO01	9	5477	5213	5/3/16	4/17/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04544311	GCA_001636325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/325/GCA_001636325.1_ASM163632v1	-	FJAT-2352
[Brevibacterium] frigoritolerans	450367	PRJNA315347	315347	Terrabacteria group	Firmicutes	5.46025	40.6	-	LUUS01	2	5252	4970	5/3/16	4/17/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04544316	GCA_001636405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/405/GCA_001636405.1_ASM163640v1	-	FJAT-2396
Bacillus acidicola	209389	PRJNA318153	318153	Terrabacteria group	Firmicutes	5.13836	39.4	-	LWJG01	7	4874	4588	5/3/16	4/17/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04633494	GCA_001636425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/425/GCA_001636425.1_ASM163642v1	-	FJAT-2406
Kosmotoga arenicorallina S304	1453497	PRJNA236148	236148	Thermotogae	Thermotogae	2.11363	41	-	JFHK01	40	2007	1904	5/4/16	4/17/17	Contig	University of Alberta	SAMN02643424	GCA_001636545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/545/GCA_001636545.1_K.arenicorallinaCLCassembly	27313308	S304
Pedobacter panaciterrae	363849	PRJNA289309	289309	FCB group	Bacteroidetes/Chlorobi group	6.3428	38.4	-	LGEL01	500	5295	5153	4/29/16	4/17/17	Contig	Institute of Microbiology of the ASCR	SAMN03852568	GCA_001636695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/695/GCA_001636695.1_ASM163669v1	-	O48
Clostridium coskatii	1705578	PRJNA280340	280340	Terrabacteria group	Firmicutes	4.56511	31.1	-	LITQ01	85	4303	4051	5/4/16	4/12/17	Contig	Cornell University	SAMN03459583	GCA_001636835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/835/GCA_001636835.1_ASM163683v1	26331212	PS02
Bacillus gottheilii	859144	PRJNA315342	315342	Terrabacteria group	Firmicutes	4.58685	39	-	LUUP01	3	4489	4300	5/3/16	4/12/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04544312	GCA_001636345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/345/GCA_001636345.1_ASM163634v1	-	FJAT-2394
Paraburkholderia kirstenboschensis	1245436	PRJNA252981	252981	Proteobacteria	Betaproteobacteria	9.15075	61.6	-	JRTU01	1182	-	-	4/30/16	5/4/16	Contig	University of Pretoria	SAMN03081273	GCA_001636965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/965/GCA_001636965.1_ASM163696v1	26472229	Rau 2D2
Achromobacter ruhlandii	72557	PRJNA340957	340957	Proteobacteria	Betaproteobacteria	6.36668	67.6	chromosome:NZ_CP017433.1/CP017433.1	-	1	5785	5565	10/6/16	4/17/17	Chromosome	N.F.Gamaleya Research Center for Epidemiology and Microbiology	SAMN05715545	GCA_002082135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/135/GCA_002082135.1_ASM208213v1	-	SCCH3:ACH 33-1365
Paenibacillus glacialis	494026	PRJNA316042	316042	Terrabacteria group	Firmicutes	5.70929	40.7	-	LVJH01	80	5356	5021	5/5/16	4/17/17	Contig	Korea University	SAMN04574067	GCA_001637205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/205/GCA_001637205.1_ASM163720v1	-	DSM 22343
Paenibacillus antarcticus	253703	PRJNA316043	316043	Terrabacteria group	Firmicutes	5.37267	40.5	-	LVJI01	55	4960	4723	5/5/16	4/17/17	Contig	Korea University	SAMN04574068	GCA_001637225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/225/GCA_001637225.1_ASM163722v1	-	CECT 5836
Ulvibacter sp. LPB0005	1763537	PRJNA310657	310657	FCB group	Bacteroidetes/Chlorobi group	3.39574	36.3	-	LRXL01	54	3050	2986	5/5/16	4/12/17	Contig	Korea University	SAMN04451899	GCA_001637325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/325/GCA_001637325.1_ASM163732v1	-	LPB0005
Phormidium willei BDU 130791	399101	PRJNA312863	312863	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.60057	53.4	-	LSZA01	171	4077	3861	5/5/16	4/17/17	Contig	Bharathidasan University	SAMN04508135	GCA_001637315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/315/GCA_001637315.1_ASM163731v1	-	BDU 130791
Wolbachia endosymbiont of Laodelphax striatella	368602	PRJNA310358	310358	Proteobacteria	Alphaproteobacteria	1.23235	33.9	-	LRUH01	99	1173	1009	5/5/16	4/17/17	Contig	Korea University	SAMN04450243	GCA_001637495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/495/GCA_001637495.1_ASM163749v1	-	wStri
Corynebacterium afermentans subsp. afermentans	144183	PRJNA319541	319541	Terrabacteria group	Actinobacteria	2.34562	64.8	-	LXGG01	24	2230	2096	5/4/16	4/12/17	Contig	Public Health Agency of Canada	SAMN04893626	GCA_001639025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/025/GCA_001639025.1_ASM163902v1	-	LCDC880199
Paenibacillus macquariensis subsp. macquariensis	1468	PRJNA316034	316034	Terrabacteria group	Firmicutes	6.27244	40.7	-	LVJF01	82	5861	5540	5/5/16	4/12/17	Contig	Korea University	SAMN04574061	GCA_001637165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/165/GCA_001637165.1_ASM163716v1	-	DSM 2
Flavobacterium fryxellicola	249352	PRJNA316046	316046	FCB group	Bacteroidetes/Chlorobi group	3.72101	34.6	-	LVJE01	49	3270	3150	5/5/16	4/12/17	Contig	Korea University	SAMN04574069	GCA_001637185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/185/GCA_001637185.1_ASM163718v1	-	DSM 16209
Bifidobacterium adolescentis	1680	PRJNA271241	271241	Terrabacteria group	Actinobacteria	2.17372	59.3	chromosome:NZ_CP010437.1/CP010437.1	-	1	1825	1696	1/14/15	4/2/17	Complete Genome	China Agricultural University	SAMN03273368	GCA_000817995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/995/GCA_000817995.1_ASM81799v1	-	BBMN23
Methanobrevibacter filiformis	55758	PRJNA318759	318759	Euryarchaeota	Methanobacteria	2.60614	27	-	LWMT01	295	1976	1835	4/29/16	4/17/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04867340	GCA_001639265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/265/GCA_001639265.1_ASM163926v1	-	DSM 11501
Methanobrevibacter cuticularis	47311	PRJNA318765	318765	Euryarchaeota	Methanobacteria	2.6087	26.8	-	LWMW01	169	2042	1925	4/29/16	4/17/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04867344	GCA_001639285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/285/GCA_001639285.1_ASM163928v1	-	DSM 11139
Methanobrevibacter curvatus	49547	PRJNA318764	318764	Euryarchaeota	Methanobacteria	2.41461	25.7	-	LWMV01	232	1948	1837	4/29/16	4/17/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04867343	GCA_001639295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/295/GCA_001639295.1_ASM163929v1	-	DSM 11111
Marinomonas aquimarina	295068	PRJEB14208	327047	Proteobacteria	Gammaproteobacteria	3.65963	48.9	-	FLOC01	47	3448	3291	6/24/16	4/13/17	Contig	UVEG	SAMEA4019367	GCA_900089755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/755/GCA_900089755.1_MaquimarinaCECT5080_SPAdes_Prokka	-	CECT 5080
Paenirhodobacter sp. MME-103	1662865	PRJDB4657	316836	Proteobacteria	Alphaproteobacteria	3.79706	67	-	BDDO01	202	3781	3557	5/3/16	4/12/17	Scaffold	Incheon National University	SAMD00049912	GCA_001639985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/985/GCA_001639985.1_ASM163998v1	-	MME-103
Polaribacter atrinae	1333662	PRJNA308254	308254	FCB group	Bacteroidetes/Chlorobi group	3.9427	30.4	-	LVWE01	113	3424	3271	5/6/16	4/12/17	Contig	Korea University	SAMN04390154	GCA_001640115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/115/GCA_001640115.1_ASM164011v1	-	KACC 17473
Candidatus Arsenophonus triatominarum	57911	PRJNA311587	311587	Proteobacteria	Gammaproteobacteria	3.85872	38.3	-	LWMI01	94	-	-	5/9/16	5/9/16	Contig	University of Liverpool	SAMN04485997	GCA_001640365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/365/GCA_001640365.1_ASM164036v1	-	ATi
Clostridiales bacterium KLE1615	1715004	PRJNA296346	296346	Terrabacteria group	Firmicutes	3.90396	41.2	-	LXPQ01	122	3451	3219	5/9/16	4/12/17	Scaffold	The Genome Institute at Washington University	SAMN04859031	GCA_001641065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/065/GCA_001641065.1_ASM164106v1	-	KLE1615
Aequorivita soesokkakensis	1385699	PRJNA319279	319279	FCB group	Bacteroidetes/Chlorobi group	3.19078	37.8	-	LXIE01	51	2961	2902	5/9/16	8/21/17	Contig	"FACULTY OF BIOSCIENCES AND MEDICAL ENGINEERING, UNIVERSITI TEKNOLOGI MALAYSIA"	SAMN04884531	GCA_001641085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/085/GCA_001641085.1_ASM164108v1	-	RSSK-12
Gardnerella sp. 30-4	1840518	PRJNA316969	316969	Terrabacteria group	Actinobacteria	1.5899	42.4	-	LXJL01	183	1314	1187	5/10/16	4/12/17	Scaffold	Loyola University Chicago	SAMN04625622	GCA_001641215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/215/GCA_001641215.1_ASM164121v1	-	30-4
Bradyrhizobium neotropicale	1497615	PRJNA311013	311013	Proteobacteria	Alphaproteobacteria	8.67933	63.6	-	LSEF01	125	8142	7737	5/10/16	4/12/17	Scaffold	Embrapa Agrobiologia	SAMN04457964	GCA_001641695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/695/GCA_001641695.1_ASM164169v1	-	BR 10247
Paenibacillus tyrfis	1501230	PRJNA246682	246682	Terrabacteria group	Firmicutes	8.03319	53	-	JNVM01	100	7318	6985	7/7/14	4/9/17	Contig	Monash University Malaysia	SAMN02769511	GCA_000722545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/545/GCA_000722545.1_ASM72254v1	25301658	MSt1
Bradyrhizobium stylosanthis	1803665	PRJNA315153	315153	Proteobacteria	Alphaproteobacteria	8.80172	64.6	-	LVEM01	22	8186	7957	5/10/16	4/12/17	Contig	Embrapa Soja	SAMN04549886	GCA_001641335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/335/GCA_001641335.1_ASM164133v1	-	BR 446
Pseudohongiella sp. SCS-49	1768907	PRJNA316660	316660	Proteobacteria	Gammaproteobacteria	3.39981	51.8	-	LWHM01	34	3080	2947	5/12/16	4/12/17	Scaffold	"Second Institute of Oceanography, State Oceanic Administration"	SAMN04589229	GCA_001642735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/735/GCA_001642735.1_SCS49-4fq	-	SCS-49
Streptomyces chilikensis	1194079	PRJNA315815	315815	Terrabacteria group	Actinobacteria	4.87399	69.8	-	LWCC01	1484	-	-	5/12/16	5/12/16	Scaffold	"KIIT School of Biotechnology, KIIT University"	SAMN04570437	GCA_001642695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/695/GCA_001642695.1_ASM164269v1	-	RC 1830
Tamlana agarivorans	481183	PRJNA318968	318968	FCB group	Bacteroidetes/Chlorobi group	3.83411	34.8	-	LXEI01	51	3285	3193	5/12/16	4/17/17	Contig	Shandong Univesity	SAMN04876002	GCA_001642835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/835/GCA_001642835.1_ASM164283v1	-	JW-26
Mariniblastus fucicola	980251	PRJNA269225	269225	PVC group	Planctomycetes	6.52982	53.4	-	LWSI01	57	5253	5081	5/12/16	5/31/17	Contig	"Faculty of Sciences, University of Porto"	SAMN03253105	GCA_001642875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/875/GCA_001642875.1_ASM164287v1	-	FC18
Roseimaritima ulvae	980254	PRJNA269223	269223	PVC group	Planctomycetes	8.11932	59.1	-	LWSJ01	103	5840	5638	5/12/16	4/17/17	Contig	"Faculty of Sciences, University of Porto"	SAMN03253104	GCA_001642915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/915/GCA_001642915.1_ASM164291v1	-	DSM 25454
Bifidobacterium adolescentis	1680	PRJNA240293	240293	Terrabacteria group	Actinobacteria	2.20322	59.3	chromosome:NZ_CP007443.1/CP007443.1	-	1	1825	1713	8/5/14	4/2/17	Complete Genome	University of Parma	SAMN02673695	GCA_000737885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/885/GCA_000737885.1_ASM73788v1	25063659	22L
Rhodobacteraceae bacterium SB2	1689867	PRJNA290568	290568	Proteobacteria	Alphaproteobacteria	3.63632	50.5	-	LGRT01	38	3529	3442	5/12/16	4/12/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03892967	GCA_001642945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/945/GCA_001642945.1_ASM164294v1	-	SB2
Rubripirellula obstinata	406547	PRJNA269220	269220	PVC group	Planctomycetes	6.57871	54.1	-	LWSK01	307	5199	5000	5/12/16	4/17/17	Contig	"Faculty of Sciences, University of Porto"	SAMN03252601	GCA_001642955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/955/GCA_001642955.1_ASM164295v1	-	CECT 8602
Domibacillus aminovorans	29332	PRJNA306602	306602	Terrabacteria group	Firmicutes	4.04219	40.6	-	LQWZ01	38	4255	3945	5/13/16	8/22/17	Scaffold	CSIR-Institute of Mircrobial Technology	SAMN04357284	GCA_001643245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/245/GCA_001643245.1_ASM164324v1	-	DSM 4337
Proteobacteria bacterium SPGG2	1842525	PRJNA297058	297058	Proteobacteria	unclassified Proteobacteria	2.70369	54.1	-	LXTK01	304	-	-	5/13/16	5/13/16	Contig	University of Southern California	SAMN04113179	GCA_001643475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/475/GCA_001643475.1_ASM164347v1	27208118	-
Alphaproteobacteria bacterium SPGG1	1842523	PRJNA297058	297058	Proteobacteria	Alphaproteobacteria	2.84716	63.6	-	LXTL01	301	-	-	5/13/16	5/13/16	Contig	University of Southern California	SAMN04113178	GCA_001643485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/485/GCA_001643485.1_ASM164348v1	27208118	-
Alphaproteobacteria bacterium SPGG7	1842522	PRJNA297058	297058	Proteobacteria	Alphaproteobacteria	1.79755	66.2	-	LXTF01	260	-	-	5/13/16	5/13/16	Contig	University of Southern California	SAMN04113191	GCA_001643515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/515/GCA_001643515.1_ASM164351v1	27208118	-
candidate division NC10 bacterium SPGG6	1842517	PRJNA297058	297058	unclassified Bacteria	Bacteria candidate phyla	1.25327	60.4	-	LXTG01	127	-	-	5/13/16	5/13/16	Contig	University of Southern California	SAMN04113183	GCA_001643535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/535/GCA_001643535.1_ASM164353v1	27208118	-
Nitrospirae bacterium SPGG5	1842520	PRJNA297058	297058	Nitrospirae	unclassified Nitrospirae	1.32812	50.1	-	LXTH01	260	-	-	5/13/16	5/13/16	Contig	University of Southern California	SAMN04113182	GCA_001643555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/555/GCA_001643555.1_ASM164355v1	27208118	-
Chloroflexi bacterium SPGG9	1842519	PRJNA297058	297058	Terrabacteria group	Chloroflexi	0.726771	62.6	-	LXTD01	144	-	-	5/13/16	5/13/16	Contig	University of Southern California	SAMN04113193	GCA_001643585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/585/GCA_001643585.1_ASM164358v1	27208118	-
bacterium SPGG8	1842518	PRJNA297058	297058	unclassified Bacteria	unclassified Bacteria (miscellaneous)	2.14364	43.7	-	LXTE01	367	-	-	5/13/16	5/13/16	Contig	University of Southern California	SAMN04113184	GCA_001643615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/615/GCA_001643615.1_ASM164361v1	27208118	-
Proteobacteria bacterium SPGG4	1842524	PRJNA297058	297058	Proteobacteria	unclassified Proteobacteria	1.44203	43.4	-	LXTI01	288	-	-	5/13/16	5/13/16	Contig	University of Southern California	SAMN04113181	GCA_001643635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/635/GCA_001643635.1_ASM164363v1	27208118	-
Capnocytophaga canis	1848903	PRJEB8046	270925	FCB group	Bacteroidetes/Chlorobi group	2.57589	35.6	-	CDOI01	216	2168	2034	1/20/15	4/10/17	Contig	"BIOZENTRUM, UNIVERSITY OF BASEL"	SAMEA3180118	GCA_000827555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/827/555/GCA_000827555.1_CcanD38.1	-	CcD38
Methylomonas lenta	980561	PRJNA315274	315274	Proteobacteria	Gammaproteobacteria	4.70386	46.6	-	LUUI01	171	4373	4198	5/16/16	4/17/17	Contig	Ghent University	SAMN04555164	GCA_001644015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/015/GCA_001644015.1_ASM164401v1	-	R-45370
Opitutae bacterium SCGC AG-212-L18	1799660	PRJNA311679	311679	PVC group	Verrucomicrobia	0.281276	38	-	LSTG01	50	265	207	5/16/16	5/16/16	Contig	Iowa State University	SAMN04490956	GCA_001644255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/255/GCA_001644255.1_ASM164425v1	-	SCGC AG-212-L18
Acidobacteria bacterium SCGC AG-212-P17	1803033	PRJNA311679	311679	Acidobacteria	unclassified Acidobacteria	0.615657	54.5	-	LSTK01	69	554	485	5/16/16	5/16/16	Contig	Iowa State University	SAMN04490960	GCA_001644245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/245/GCA_001644245.1_ASM164424v1	-	SCGC AG-212-P17
bacterium SCGC AG-212-C10	1799370	PRJNA311679	311679	unclassified Bacteria	unclassified Bacteria (miscellaneous)	2.50319	64.4	-	LSSX01	200	2434	2209	5/16/16	5/16/16	Contig	Iowa State University	SAMN04487201	GCA_001644275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/275/GCA_001644275.1_ASM164427v1	-	SCGC AG-212-C10
Actinobacteria bacterium SCGC AG-212-D09	1799652	PRJNA311679	311679	Terrabacteria group	Actinobacteria	0.70961	67.8	-	LSSY01	69	725	651	5/16/16	5/16/16	Contig	Iowa State University	SAMN04490946	GCA_001644325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/325/GCA_001644325.1_ASM164432v1	-	SCGC AG-212-D09
Planctomycetaceae bacterium SCGC AG-212-D15	1799653	PRJNA311679	311679	PVC group	Planctomycetes	1.54765	62.8	-	LSSZ01	126	1402	1256	5/16/16	5/16/16	Contig	Iowa State University	SAMN04490948	GCA_001644345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/345/GCA_001644345.1_ASM164434v1	-	SCGC AG-212-D15
Verrucomicrobia bacterium SCGC AG-212-E04	1799654	PRJNA311679	311679	PVC group	Verrucomicrobia	1.17088	62.6	-	LSTA01	93	1118	1012	5/16/16	5/16/16	Contig	Iowa State University	SAMN04490949	GCA_001644365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/365/GCA_001644365.1_ASM164436v1	-	SCGC AG-212-E04
Rhizomicrobium sp. SCGC AG-212-E05	1799655	PRJNA311679	311679	Proteobacteria	Alphaproteobacteria	1.31414	63	-	LSTB01	86	1328	1220	5/16/16	5/16/16	Contig	Iowa State University	SAMN04490951	GCA_001644385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/385/GCA_001644385.1_ASM164438v1	-	SCGC AG-212-E05
Planctomycetaceae bacterium SCGC AG-212-F19	1799658	PRJNA311679	311679	PVC group	Planctomycetes	4.33776	63.4	-	LSTD01	316	3743	3395	5/16/16	5/16/16	Contig	Iowa State University	SAMN04490953	GCA_001644415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/415/GCA_001644415.1_ASM164441v1	-	SCGC AG-212-F19
Gammaproteobacteria bacterium SCGC AG-212-F23	1799661	PRJNA311679	311679	Proteobacteria	Gammaproteobacteria	1.4621	38.5	-	LSTE01	125	1403	1266	5/16/16	5/16/16	Contig	Iowa State University	SAMN04490954	GCA_001644445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/445/GCA_001644445.1_ASM164444v1	-	SCGC AG-212-F23
Betaproteobacteria bacterium SCGC AG-212-J23	1799662	PRJNA311679	311679	Proteobacteria	Betaproteobacteria	2.05821	66.6	-	LSTF01	123	2227	2067	5/16/16	5/16/16	Contig	Iowa State University	SAMN04490955	GCA_001644455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/455/GCA_001644455.1_ASM164445v1	-	SCGC AG-212-J23
Gaiella sp. SCGC AG-212-M14	1799656	PRJNA311679	311679	Terrabacteria group	Actinobacteria	0.99536	66.4	-	LSTI01	82	1035	915	5/16/16	5/16/16	Contig	Iowa State University	SAMN04490958	GCA_001644475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/475/GCA_001644475.1_ASM164447v1	-	SCGC AG-212-M14
Verrucomicrobiaceae bacterium SCGC AG-212-N21	1799659	PRJNA311679	311679	PVC group	Verrucomicrobia	1.51357	61.7	-	LSTJ01	154	1303	1147	5/16/16	5/16/16	Contig	Iowa State University	SAMN04490959	GCA_001644495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/495/GCA_001644495.1_ASM164449v1	-	SCGC AG-212-N21
Glutamicibacter arilaitensis Re117	861360	PRJEA50353	50353	Terrabacteria group	Actinobacteria	3.91819	59.2853	chromosome:NC_014550.1/FQ311875.1; plasmid pRE117-1:NC_014549.1/FQ311475.1; plasmid pRE117-2:NC_014548.1/FQ311476.1	-	3	3670	3464	9/27/10	4/7/17	Complete Genome	"I.N.R.A. , French National Institute for Agricultural Research"	SAMEA2272213	GCA_000197735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/197/735/GCA_000197735.1_ASM19773v1	21124797	Re117
Pseudomonas syringae UMAF0158	1332075	PRJNA202281	202281	Proteobacteria	Gammaproteobacteria	5.85099	59.2494	chromosome:NZ_CP005970.1/CP005970.1; plasmid unnamed:NZ_CP005971.1/CP005971.1	-	2	5303	5054	9/14/15	3/26/17	Complete Genome	CBGP	SAMN04053740	GCA_001281365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/365/GCA_001281365.1_ASM128136v1	26313942	UMAF0158
Candidatus Tenderia electrophaga	1748243	PRJNA244670	244670	Proteobacteria	Gammaproteobacteria	3.76387	59.2154	chromosome:CP013099.1; plasmid unnamed:CP013100.1	-	2	3444	3349	11/24/15	11/24/15	Complete Genome	US Naval Research laboratory	SAMN04120379	GCA_001447805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/447/805/GCA_001447805.1_ASM144780v1	-	-
Piscirickettsiaceae bacterium NZ-RLO	1810840	PRJNA314275	314275	Proteobacteria	Gammaproteobacteria	3.05267	39.2	-	LVCQ01	463	2955	2623	5/16/16	4/12/17	Contig	Ministry for Primary Industries	SAMN04531180	GCA_001644975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/975/GCA_001644975.1_ASM164497v1	-	NZ-RLO
Paraburkholderia panaciterrae	1462439	PRJNA319666	319666	Proteobacteria	Betaproteobacteria	8.48339	62.4	-	LXJZ01	253	7664	7385	5/16/16	4/12/17	Contig	Institute for Environmental Health	SAMN04902945	GCA_001645135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/135/GCA_001645135.1_ASM164513v1	-	DCY85-1
Paraburkholderia ginsengiterrae	1462993	PRJNA319663	319663	Proteobacteria	Betaproteobacteria	8.53304	62.5	-	LXKA01	393	7688	7376	5/16/16	4/12/17	Contig	Institute of Environmental Health	SAMN04902899	GCA_001645125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/125/GCA_001645125.1_ASM164512v1	-	DCY85
Gluconobacter cerinus	38307	PRJNA314894	314894	Proteobacteria	Alphaproteobacteria	3.66169	55.7	-	LUTU01	45	3430	3204	5/16/16	4/17/17	Contig	Universitat Rovira i Virgili	SAMN04545322	GCA_001645165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/165/GCA_001645165.1_ASM164516v1	-	CECT 9110
Methylobacillus sp. MM2	1848039	PRJNA320844	320844	Proteobacteria	Betaproteobacteria	2.9558	57.6	-	LXTQ01	59	2927	2849	5/16/16	6/20/17	Contig	University of East Anglia	SAMN04958150	GCA_001645185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/185/GCA_001645185.1_ASM164518v1	-	MM2
Rhodococcus kyotonensis	398843	PRJNA314554	314554	Terrabacteria group	Actinobacteria	5.47107	65.2	-	LVHI01	41	5056	4893	5/17/16	4/17/17	Scaffold	Korea Research Institute of Bioscience and Biotechnology (KRIBB)	SAMN04545449	GCA_001645385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/385/GCA_001645385.1_ASM164538v1	-	KB10
Candidatus Mycoplasma haemobos	432608	PRJNA319681	319681	Terrabacteria group	Tenericutes	0.935638	30.5	-	LWUJ01	18	1166	1109	5/17/16	5/17/16	Contig	INIFAP	SAMN04903359	GCA_001645765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/765/GCA_001645765.1_ASM164576v1	-	INIFAP01
Rhodococcus gordoniae	223392	PRJNA306614	306614	Terrabacteria group	Actinobacteria	4.82435	67.9	-	LPZN01	114	4460	4238	5/18/16	4/17/17	Contig	Northumbria University	SAMN04357310	GCA_001646655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/646/655/GCA_001646655.1_ASM164665v1	-	DSM 44689
Rhodococcus kroppenstedtii	293050	PRJEB17097	351697	Terrabacteria group	Actinobacteria	4.08283	70.1	-	FOJN01	30	3789	3652	10/30/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444374	GCA_900111805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/805/GCA_900111805.1_IMG-taxon_2693429870_annotated_assembly	-	DSM 44908
Pseudomonas fragi	296	PRJNA380155	380155	Proteobacteria	Gammaproteobacteria	5.15213	59.2115	chromosome:NZ_CP021132.1/CP021132.1; plasmid unnamed1:NZ_CP021133.1/CP021133.1; plasmid unnamed2:NZ_CP021134.1/CP021134.1; plasmid unnamed3:NZ_CP021135.1/CP021135.1	-	4	4759	4500	5/11/17	5/24/17	Complete Genome	Nanjing Agricultural University	SAMN06628701	GCA_002128325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/325/GCA_002128325.1_ASM212832v1	-	NMC25
Pseudomonas brenneri	129817	PRJEB16481	349375	Proteobacteria	Gammaproteobacteria	6.03271	60.1	chromosome I:NZ_LT629800.1/LT629800.1	-	1	5553	5382	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04490181	GCA_900105815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/815/GCA_900105815.1_IMG-taxon_2639762518_annotated_assembly	-	BS2771
Paraclostridium benzoelyticum	1629550	PRJNA277794	277794	Terrabacteria group	Firmicutes	3.55596	28.3	-	LBBT01	368	3470	3282	5/13/15	4/18/17	Contig	UoH	SAMN03396706	GCA_001006285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/285/GCA_001006285.1_ASM100628v1	26067979	JC272
Candidatus Rubidus massiliensis	1444712	PRJEB6078	251969	PVC group	Chlamydiae	2.82122	32.6	-	CCSC01	5	2491	2446	9/6/14	7/29/16	Contig	URMITE	SAMEA2610617	GCA_000756735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/735/GCA_000756735.1_Chlamydia_sp_Rubis	-	-
Marinomonas atlantica	1806668	PRJNA312797	312797	Proteobacteria	Gammaproteobacteria	3.86105	44.6	-	LTAW01	69	3685	3588	4/29/16	4/12/17	Contig	Universidad de Santiago de Compostela	SAMN04506809	GCA_001639725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/725/GCA_001639725.1_ASM163972v1	-	Cmf 18.22
Marinomonas gallaica	1806667	PRJNA312795	312795	Proteobacteria	Gammaproteobacteria	4.0137	45.3	-	LTAX01	121	3719	3618	4/29/16	4/12/17	Contig	Universidad de Santiago de Compostela	SAMN04506808	GCA_001639745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/745/GCA_001639745.1_ASM163974v1	-	Cmf 17.2
Rhodococcus kunmingensis	408066	PRJNA306614	306614	Terrabacteria group	Actinobacteria	5.62278	66.2	-	LRRB01	330	5268	4885	5/18/16	4/17/17	Contig	Northumbria University	SAMN04357316	GCA_001646865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/646/865/GCA_001646865.1_rk21	-	DSM 45001
Endozoicomonas atrinae	1333660	PRJNA292506	292506	Proteobacteria	Gammaproteobacteria	6.68742	47.9	-	LUKQ02	980	5979	5476	5/18/16	4/13/17	Scaffold	Aarhus University	SAMN03978955	GCA_001647025.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/025/GCA_001647025.2_EnAtr_2.0	27344411	WP70
Tsukamurella pseudospumae	239498	PRJNA311106	311106	Terrabacteria group	Actinobacteria	4.93905	70.3	-	LSRE01	69	4829	4644	2/26/16	4/12/17	Contig	The University of Hong Kong	SAMN04457859	GCA_001575205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/205/GCA_001575205.1_ASM157520v1	-	JCM 13375
Rufibacter roseus	1567108	PRJNA309044	309044	FCB group	Bacteroidetes/Chlorobi group	5.11779	46.3	-	LRML01	39	4235	4144	5/2/16	4/12/17	Contig	Masaryk University	SAMN04419563	GCA_001647285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/285/GCA_001647285.1_ASM164728v1	27488543	CCM 8621
Serratia marcescens	615	PRJNA357595	357595	Proteobacteria	Gammaproteobacteria	5.36365	59.209	chromosome:NZ_CP018919.1/CP018919.1; plasmid unnamed3:NZ_CP018920.1/CP018920.1; plasmid unnamed4:NZ_CP018921.1/CP018921.1; plasmid unnamed5:NZ_CP018922.1/CP018922.1	-	4	5161	4950	7/18/17	7/21/17	Complete Genome	University of Michigan	SAMN06164061	GCA_002220715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/715/GCA_002220715.1_ASM222071v1	28536292	UMH7
Emticicia sp. MM	1839755	PRJNA316534	316534	FCB group	Bacteroidetes/Chlorobi group	4.10109	36.4	-	LXHX01	121	3435	3338	5/22/16	4/12/17	Scaffold	University of Delhi	SAMN04585408	GCA_001649495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/495/GCA_001649495.1_ASM164949v1	-	MM
Opitutaceae bacterium TSB47	1184151	PRJNA309901	309901	PVC group	Verrucomicrobia	7.81591	62.8	-	LRRQ01	36	5428	5110	5/23/16	4/17/17	Scaffold	Central China Normal University	SAMN04441843	GCA_001650175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/175/GCA_001650175.1_ASM165017v1	-	TSB47
Photobacterium jeanii	858640	PRJNA315906	315906	Proteobacteria	Gammaproteobacteria	5.04704	45.1	-	LVHF01	33	4496	4342	5/24/16	4/17/17	Contig	"Yantai Institute of Coastal Zone Research,Chinese Academy of Sciences"	SAMN04571864	GCA_001650345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/345/GCA_001650345.1_ASM165034v1	-	R-40508
Magnetospirillum moscoviense	1437059	PRJNA318449	318449	Proteobacteria	Alphaproteobacteria	4.1645	65.2	-	LWQU01	207	3959	3766	5/24/16	4/12/17	Contig	Research Center of Biotechnology RAS	SAMN04851435	GCA_001650635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/635/GCA_001650635.1_ASM165063v1	-	BB-1
Magnetospirillum marisnigri	1285242	PRJNA318445	318445	Proteobacteria	Alphaproteobacteria	4.61982	64.7	-	LWQT01	131	4294	4145	5/24/16	4/12/17	Scaffold	Research Center of Biotechnology RAS	SAMN04851434	GCA_001650715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/715/GCA_001650715.1_ASM165071v1	-	SP-1
Rhodobacteraceae bacterium EhC02	1849170	PRJNA321723	321723	Proteobacteria	Alphaproteobacteria	4.08908	63.5	-	LXYH01	60	3929	3809	5/24/16	4/12/17	Scaffold	University of Alberta	SAMN04965933	GCA_001650895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/895/GCA_001650895.1_ASM165089v1	-	EhC02
Balneola sp. EhC07	1849360	PRJNA321723	321723	Balneolaeota	Balneolia	3.62423	38.1	-	LXYG01	20	3174	3108	5/24/16	4/12/17	Contig	University of Alberta	SAMN04957308	GCA_001650905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/905/GCA_001650905.1_ASM165090v1	-	EhC07
Sphingomonadales bacterium EhC05	1849171	PRJNA321723	321723	Proteobacteria	Alphaproteobacteria	4.1903	53.7	-	LXYP01	77	4013	3896	5/24/16	4/12/17	Scaffold	University of Alberta	SAMN04965935	GCA_001650955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/955/GCA_001650955.1_ASM165095v1	-	EhC05
Pseudomonas viridiflava	33069	PRJEB20965	389692	Proteobacteria	Gammaproteobacteria	6.09351	59.2	chromosome I:NZ_LT855380.1/LT855380.1	-	1	5483	5313	6/9/17	6/21/17	Complete Genome	"Zurich University of Applied Sciences (ZHAW), School of Life Sciences and Facility Management, Institute of Natural Resource Sciences"	SAMEA104090973	GCA_900184295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/184/295/GCA_900184295.1_Chr_1	-	CFBP 1590
Eikenella sp. HMSC061C02	1715021	PRJNA296148	296148	Proteobacteria	Betaproteobacteria	2.28427	55.8	-	LTKM01	78	2318	2205	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04495803	GCA_001809035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/035/GCA_001809035.1_ASM180903v1	-	HMSC061C02
Granulibacter bethesdensis	364410	PRJNA352742	352742	Proteobacteria	Alphaproteobacteria	2.73888	59.2	chromosome:NZ_CP018191.1/CP018191.1	-	1	2477	2369	12/6/16	8/31/17	Complete Genome	"Igenbio, Inc"	SAMN05991787	GCA_001889505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/505/GCA_001889505.1_ASM188950v1	-	NIH9.1
Vibrio ishigakensis	1481914	PRJDB1673	245977	Proteobacteria	Gammaproteobacteria	4.71395	46.2	-	BBRZ01	260	5918	5870	1/22/15	3/24/15	Contig	The University of Tokyo	SAMD00017303	GCA_000830415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/415/GCA_000830415.1_ASM83041v1	-	JCM19231
Ensifer glycinis	1472378	PRJNA302535	302535	Proteobacteria	Alphaproteobacteria	6.03929	62.4	-	LPUX01	68	5743	5410	5/25/16	4/12/17	Contig	Mesorhizobium mediterraneum CCBAU 01399	SAMN04274561	GCA_001651865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/865/GCA_001651865.1_ASM165186v1	27125987	CCBAU 23380
Actinomycetaceae bacterium BA112	1823756	PRJNA317166	317166	Terrabacteria group	Actinobacteria	2.52483	64.4	-	LVZK01	3	2116	2024	5/25/16	4/12/17	Contig	The Ohio State University	SAMN04600420	GCA_001652275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/275/GCA_001652275.1_ASM165227v1	-	BA112
Granulibacter bethesdensis	364410	PRJNA347349	347349	Proteobacteria	Alphaproteobacteria	2.73888	59.2	chromosome:NZ_CP018194.1/CP018194.1	-	1	2476	2368	12/6/16	8/28/17	Complete Genome	"Igenbio, Inc"	SAMN05879666	GCA_001889545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/545/GCA_001889545.1_ASM188954v1	-	NIH8.1
Mycobacterium mungi	1844474	PRJNA320514	320514	Terrabacteria group	Actinobacteria	4.34852	65.5	-	LXTB01	110	4310	4013	5/26/16	4/12/17	Contig	USDA Animal Plant Health Inspection Service-National Veterinary Services Laboratories - DBL	SAMN04942516	GCA_001652545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/545/GCA_001652545.1_ASM165254v1	-	BM22813
Christensenella sp. AF73-05CM02	1851429	PRJNA326054	326054	Terrabacteria group	Firmicutes	3.02665	52.1	-	MAIQ01	29	2850	2766	7/4/16	4/13/17	Scaffold	BGI-shenzhen	SAMN05257102	GCA_001678845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/845/GCA_001678845.1_ASM167884v1	-	AF73-05CM02
Thermosulfurimonas dismutans	999894	PRJNA317713	317713	Thermodesulfobacteria	Thermodesulfobacteria	2.11993	50.1	-	LWLG01	61	2156	2048	5/26/16	4/17/17	Contig	"Institute of Bioengineering, Research Center of Biotechnology of RAS"	SAMN04623574	GCA_001652585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/585/GCA_001652585.1_ASM165258v1	-	S95
Serratia rubidaea	61652	PRJNA311262	311262	Proteobacteria	Gammaproteobacteria	4.92283	59.2	chromosome:NZ_CP014474.1/CP014474.1	-	1	4613	4459	2/25/16	4/12/17	Complete Genome	State Key Laboratory of Pathogen and Biosecurity	SAMN04481172	GCA_001572725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/725/GCA_001572725.1_ASM157272v1	27125482	1122
Enterococcus thailandicus	417368	PRJNA318928	318928	Terrabacteria group	Firmicutes	2.60369	36.7	-	LWMN01	17	2460	2372	5/27/16	4/12/17	Contig	Lethbridge Research Centre	SAMN04870324	GCA_001652875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/875/GCA_001652875.1_ASM165287v1	-	F0711D 46
Rheinheimera mesophila	1547515	PRJNA271327	271327	Proteobacteria	Gammaproteobacteria	3.75001	47.8	-	LAVS01	98	3571	3411	5/1/15	4/10/17	Scaffold	CSRI-IMTECH	SAMN03273965	GCA_000986865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/986/865/GCA_000986865.1_ASM98686v1	26220076	IITR-13
Bacillus campisalis	1408103	PRJNA280027	280027	Terrabacteria group	Firmicutes	5.18206	45.4	-	LAYY01	102	5127	4872	5/1/15	4/18/17	Scaffold	Institute of Microbial Technology	SAMN03454233	GCA_000986785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/986/785/GCA_000986785.1_ASM98678v1	26296567	SA2-6
Sulfurovum riftiae	1630136	PRJNA301466	301466	Proteobacteria	delta/epsilon subdivisions	2.37469	45.7	-	LNKT01	72	2401	2319	3/21/16	4/12/17	Contig	Rutgers University	SAMN04247392	GCA_001595645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/645/GCA_001595645.1_ASM159564v1	27116914	1812E
Kerstersia gyiorum	206506	PRJNA282676	282676	Proteobacteria	Betaproteobacteria	3.94309	62.3797	plasmid unnamed:NZ_CM004382.1/CM004382.1	LBNE01	32	3496	3381	5/5/15	4/17/17	Scaffold	CDPH	SAMN03573805	GCA_000988095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/095/GCA_000988095.1_ASM98809v1	26358603	CG1
Opitutaceae bacterium TAV3	278958	PRJNA321366	321366	PVC group	Verrucomicrobia	5.62279	60.8	-	LXWT01	86	4697	4129	6/1/16	4/17/17	Scaffold	University of Texas at Arlington	SAMN04992812	GCA_001653815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/815/GCA_001653815.1_ASM165381v1	-	TAV3
Opitutaceae bacterium TAV4	278959	PRJNA321367	321367	PVC group	Verrucomicrobia	5.6078	60.8	-	LXWU01	90	4675	4153	6/1/16	4/17/17	Scaffold	University of Texas at Arlington	SAMN04992813	GCA_001653825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/825/GCA_001653825.1_ASM165382v1	-	TAV4
Pseudomonas sp. URMO17WK12:I11	1283291	PRJEB9391	308089	Proteobacteria	Gammaproteobacteria	6.37444	59.2	chromosome 1:NZ_LN854573.1/LN854573.1	-	1	5836	5628	11/17/15	4/11/17	Complete Genome	SIB	SAMEA3393040	GCA_001511755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/755/GCA_001511755.1_Shine	-	-
Niabella sp. SCN 42-15	1660118	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	0.894739	42.3	-	MEEM01	73	790	697	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652461	GCA_001724455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/455/GCA_001724455.1_ASM172445v1	26031303	-
Bacillus litoralis	152268	PRJNA317951	317951	Terrabacteria group	Firmicutes	5.6163	35.5	-	LWSG01	46	5259	4996	6/2/16	4/17/17	Contig	Hebei University	SAMN04631813	GCA_001654695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/654/695/GCA_001654695.1_ASM165469v1	-	C44
Buttiauxella gaviniae ATCC 51604	1354253	PRJNA210903	210903	Proteobacteria	Gammaproteobacteria	5.06808	49.4	-	LXEP01	133	4881	4647	6/2/16	4/17/17	Contig	UW-GEL (University of Wisconsin - Genome Evolution Laboratory)	SAMN04870320	GCA_001654835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/654/835/GCA_001654835.1_Bga51604_DRAFTv1	-	ATCC 51604
Enterobacter soli ATCC BAA-2102	1354262	PRJNA210913	210913	Proteobacteria	Gammaproteobacteria	4.96077	53.8	-	LXES01	74	4808	4638	6/2/16	4/17/17	Contig	UW-GEL (University of Wisconsin - Genome Evolution Laboratory)	SAMN04875425	GCA_001654845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/654/845/GCA_001654845.1_EsoBAA2102_DRAFTv1	-	ATCC BAA-2102
Planomonospora sphaerica	161355	PRJDB4644	319188	Terrabacteria group	Actinobacteria	8.13264	72.7	-	BDCX01	84	7154	6828	4/20/16	4/17/17	Contig	"Utsunomiya University, Center for Bioscience Research and Education"	SAMD00048613	GCA_001653075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/075/GCA_001653075.1_Psphaerica_assembly01	27492001	JCM 9374
Hoyosella altamirensis	616997	PRJDB4763	322028	Terrabacteria group	Actinobacteria	4.8751	62.2	-	BDDI01	55	4654	4501	5/17/16	4/17/17	Contig	National Institute of Technology and Evaluation Biological Resource Center	SAMD00051152	GCA_001653095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/095/GCA_001653095.1_ASM165309v1	-	NBRC 109631
Porphyromonadaceae bacterium H1	1658779	PRJDB4842	321502	FCB group	Bacteroidetes/Chlorobi group	2.84032	45.4	-	BDEJ01	117	2470	2354	5/14/16	4/12/17	Contig	National Institute of Infectious Diseases	SAMD00051851	GCA_001653155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/155/GCA_001653155.1_ASM165315v1	-	H1
Buttiauxella noackiae ATCC 51607	1354255	PRJNA210905	210905	Proteobacteria	Gammaproteobacteria	4.80358	49.5	-	LXEO01	104	4540	4354	6/2/16	4/17/17	Contig	UW-GEL (University of Wisconsin - Genome Evolution Laboratory)	SAMN04870321	GCA_001654865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/654/865/GCA_001654865.1_Bno51607_DRAFTv1	-	ATCC 51607
Cosenzaea myxofaciens ATCC 19692	1354337	PRJNA210909	210909	Proteobacteria	Gammaproteobacteria	3.69574	36.3	-	LXEN01	293	3342	3148	6/2/16	4/17/17	Contig	UW-GEL (University of Wisconsin - Genome Evolution Laboratory)	SAMN04870322	GCA_001654855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/654/855/GCA_001654855.1_Cmy19692_DRAFTv1	-	ATCC 19692
Buttiauxella ferragutiae ATCC 51602	1354252	PRJNA210902	210902	Proteobacteria	Gammaproteobacteria	5.08709	50.4	-	LXEQ01	89	4741	4561	6/2/16	4/17/17	Contig	UW-GEL (University of Wisconsin - Genome Evolution Laboratory)	SAMN04870319	GCA_001654915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/654/915/GCA_001654915.1_Bfe51602_DRAFTv1	-	ATCC 51602
Buttiauxella brennerae ATCC 51605	1354251	PRJNA210901	210901	Proteobacteria	Gammaproteobacteria	4.75827	50.6	-	LXER01	88	4485	4314	6/2/16	4/17/17	Contig	UW-GEL (University of Wisconsin - Genome Evolution Laboratory)	SAMN04870318	GCA_001654925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/654/925/GCA_001654925.1_Bbr51605_DRAFTv1	-	ATCC 51605
Kluyvera georgiana ATCC 51603	1354264	PRJNA210915	210915	Proteobacteria	Gammaproteobacteria	5.06898	54.5	-	LXEU01	163	4954	4667	6/2/16	4/17/17	Contig	UW-GEL (University of Wisconsin - Genome Evolution Laboratory)	SAMN04875430	GCA_001654985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/654/985/GCA_001654985.1_Kge51603_DRAFTv1	-	ATCC 51603
Candidatus Nitrospira inopinata	1715989	PRJEB10818	302402	Nitrospirae	Nitrospira	3.29512	59.2	chromosome 1:NZ_LN885086.1/LN885086.1	-	1	3136	3053	11/16/15	4/11/17	Complete Genome	"Department of Microbiology and Ecosystem Science, University of Vienna"	SAMEA3560316	GCA_001458695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/695/GCA_001458695.1_NiCh1	-	-
Yersinia entomophaga	935293	PRJNA267025	267025	Proteobacteria	Gammaproteobacteria	4.27541	48.6	chromosome:NZ_CP010029.1/CP010029.1	-	1	3941	3721	6/3/16	4/17/17	Chromosome	AgResearch	SAMN03177402	GCA_001656035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/035/GCA_001656035.1_ASM165603v1	27187466	MH96
Ectothiorhodospiraceae bacterium BBD 1991-15	1852620	PRJNA281489	281489	Proteobacteria	Gammaproteobacteria	10.8943	62.1	-	LYSX01	128	-	-	6/3/16	6/3/16	Scaffold	University of Michigan	SAMN04939354	GCA_001657305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/305/GCA_001657305.1_ASM165730v1	-	-
Flammeovirgaceae bacterium BBD 1991-12	1852619	PRJNA281489	281489	FCB group	Bacteroidetes/Chlorobi group	8.58969	45.4	-	LYSV01	282	-	-	6/3/16	6/3/16	Scaffold	University of Michigan	SAMN04939356	GCA_001657315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/315/GCA_001657315.1_ASM165731v1	-	-
Planctomycetaceae bacterium BBD 1991-11	1852623	PRJNA281489	281489	PVC group	Planctomycetes	4.92238	69.2	-	LYTA01	405	-	-	6/3/16	6/3/16	Scaffold	University of Michigan	SAMN04939176	GCA_001657375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/375/GCA_001657375.1_ASM165737v1	-	-
Rhodospirillales bacterium BBD 1991-14	1852621	PRJNA281489	281489	Proteobacteria	Alphaproteobacteria	5.51034	66	-	LYSY01	21	-	-	6/3/16	6/3/16	Scaffold	University of Michigan	SAMN04939355	GCA_001657395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/395/GCA_001657395.1_ASM165739v1	-	-
Bacteroidales bacterium Barb6XT	1633202	PRJNA278755	278755	FCB group	Bacteroidetes/Chlorobi group	3.43356	48.7	-	LBCW01	489	3070	2752	6/3/16	4/12/17	Contig	University of British Columbia	SAMN03428871	GCA_001657585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/585/GCA_001657585.1_ASM165758v1	-	Barb6XT
Bacteroidales bacterium Barb4	1633200	PRJNA278755	278755	FCB group	Bacteroidetes/Chlorobi group	3.32759	47.9	-	LBCX01	553	3062	2673	6/3/16	4/17/17	Contig	University of British Columbia	SAMN03428873	GCA_001657575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/575/GCA_001657575.1_ASM165757v1	-	Barb4
Bacteroidales bacterium Barb7	1633203	PRJNA278755	278755	FCB group	Bacteroidetes/Chlorobi group	2.54884	47.3	-	LBCZ01	740	2954	2921	6/3/16	6/3/16	Contig	University of British Columbia	SAMN03428875	GCA_001657615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/615/GCA_001657615.1_ASM165761v1	-	Barb7
Bacteroidales bacterium Barb6	1633201	PRJNA278755	278755	FCB group	Bacteroidetes/Chlorobi group	3.13497	47.8	-	LBCY01	648	2957	2571	6/3/16	4/12/17	Contig	University of British Columbia	SAMN03428874	GCA_001657625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/625/GCA_001657625.1_ASM165762v1	-	Barb6
Labilibacter marinus	1477105	PRJNA321787	321787	FCB group	Bacteroidetes/Chlorobi group	6.02658	35.4	-	LXYE02	81	4644	4558	6/7/16	4/18/17	Contig	Shandong University at Weihai	SAMN05003866	GCA_001659685.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/685/GCA_001659685.2_ASM165968v2	-	Y11
Pseudomonas syringae pv. syringae B301D	1324931	PRJNA198193	198193	Proteobacteria	Gammaproteobacteria	6.09482	59.2	chromosome:NZ_CP005969.1/CP005969.1	-	1	5521	5167	5/6/15	3/26/17	Complete Genome	Texas A&M University	SAMN03267739	GCA_000988485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/485/GCA_000988485.1_ASM98848v1	25940918	B301D
Hyphomicrobium sp. MC1	717785	PRJNA67153	67153	Proteobacteria	Alphaproteobacteria	4.75753	59.2	chromosome:NC_015717.1/FQ859181.1	-	1	4595	4500	6/23/11	5/18/17	Complete Genome	Genoscope	SAMEA3138412	GCA_000253295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/295/GCA_000253295.1_ASM25329v1	-	MC1
Thermobifida halotolerans	483545	PRJNA293778	293778	Terrabacteria group	Actinobacteria	5.45335	71.1	-	LIZN01	74	4861	4309	6/8/16	4/17/17	Scaffold	Yunnan Institute of Microbiology	SAMN04009169	GCA_001660385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/385/GCA_001660385.1_ASM166038v1	-	YIM 90462
Alteromonadaceae bacterium XY-R5	1737567	PRJNA321585	321585	Proteobacteria	Gammaproteobacteria	5.11892	47.2	-	LXWE01	415	4469	4343	6/8/16	4/12/17	Contig	Shenzhen University	SAMN05000124	GCA_001660395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/395/GCA_001660395.1_ASM166039v1	-	XY-R5
Pedobacter jeongneungensis	947309	PRJNA226200	226200	FCB group	Bacteroidetes/Chlorobi group	6.70808	39	-	AYMG01	66	5722	5608	4/18/14	4/17/17	Contig	University of Malaya	SAMN02729849	GCA_000633455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/455/GCA_000633455.1_de_novo	-	H1ai
Kordia zhangzhouensis	1620405	PRJNA282378	282378	FCB group	Bacteroidetes/Chlorobi group	4.0316	33.8	-	LBMH01	44	3493	3412	5/8/15	4/10/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN03568965	GCA_001005305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/305/GCA_001005305.1_ASM100530v1	26297493	MCCC 1A00726
Pseudoalteromonas gelatinilytica	1703256	PRJNA309918	309918	Proteobacteria	Gammaproteobacteria	4.79762	41.4	-	LRRU01	23	4326	4195	5/10/16	4/12/17	Scaffold	"Second Institute of Oceanography, State Oceanic Administration"	SAMN04442130	GCA_001641615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/615/GCA_001641615.1_ASM164161v1	-	NH153
Massilibacillus massiliensis	1806837	PRJEB13934	321142	Terrabacteria group	Firmicutes	4.00095	37.7	-	FLKF01	7	-	-	5/13/16	5/13/16	Scaffold	URMITE	SAMEA3959780	GCA_900086705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/705/GCA_900086705.1_PRJEB13934	-	Marseille-P2411
Pseudoalteromonas prydzensis	182141	PRJDB4787	321406	Proteobacteria	Gammaproteobacteria	5.15449	41.2	-	BDDT01	35	4598	4393	5/11/16	4/17/17	Contig	Korea Polar Research Institute	SAMD00051356	GCA_001661495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/661/495/GCA_001661495.1_ASM166149v1	-	DSM 14232
Crocinitomix sp. MedPE-SWsnd	1860084	PRJNA318731	318731	FCB group	Bacteroidetes/Chlorobi group	1.70533	36.7	-	MPCV01	95	1451	1437	11/10/16	11/10/16	Contig	University Miguel Hernandez	SAMN05219205	GCA_001874165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/165/GCA_001874165.1_ASM187416v1	27446036	-
Streptomyces rangoonensis	67354	PRJNA293375	293375	Terrabacteria group	Actinobacteria	7.19588	72.6	-	LYOT01	902	6330	5636	6/10/16	3/13/17	Scaffold	USDA/ARS/NCAUR	SAMN04004091	GCA_001661615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/661/615/GCA_001661615.1_ASM166161v1	-	NRRL B-12378
Bifidobacterium adolescentis ATCC 15703	367928	PRJNA16321	16321	Terrabacteria group	Actinobacteria	2.08964	59.2	chromosome:NC_008618.1/AP009256.1	-	1	1749	1624	12/6/06	5/10/17	Complete Genome	"Gifu University, Life Science Research Center, Japan"	SAMD00061080	GCA_000010425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/425/GCA_000010425.1_ASM1042v1	-	ATCC 15703
Rhizobium bangladeshense	1138189	PRJNA321136	321136	Proteobacteria	Alphaproteobacteria	6.61443	60.9	-	LYPK01	43	6385	6049	6/13/16	4/12/17	Contig	University of Minnesota	SAMN04966274	GCA_001662055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/055/GCA_001662055.1_ASM166205v1	-	1017
Microbacterium arborescens	33883	PRJNA323402	323402	Terrabacteria group	Actinobacteria	3.43204	70.2	-	LZEM01	22	3269	3180	6/14/16	4/17/17	Contig	CSIR- National Environmental Engineering Research Institute	SAMN05211039	GCA_001662775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/775/GCA_001662775.1_ASM166277v1	-	ND21
Synechococcus sp. CC9605	110662	PRJNA13643	13643	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.51066	59.2	chromosome:NC_007516.1/CP000110.1	-	1	2773	2665	10/27/05	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02598311	GCA_000012625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/625/GCA_000012625.1_ASM1262v1	-	CC9605
Dechloromonas aromatica RCB	159087	PRJNA9635	9635	Proteobacteria	Betaproteobacteria	4.5011	59.2	chromosome:NC_007298.1/CP000089.1	-	1	4329	4192	8/5/05	5/18/17	Complete Genome	DOE Joint Genome Institute	SAMN02598546	GCA_000012425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/425/GCA_000012425.1_ASM1242v1	-	RCB
Pseudomonas syringae pv. syringae B728a	205918	PRJNA323	323	Proteobacteria	Gammaproteobacteria	6.0937	59.2	chromosome:NC_007005.1/CP000075.1	-	1	5220	5089	5/12/05	8/3/16	Complete Genome	DOE Joint Genome Institute	SAMN02604347	GCA_000012245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/245/GCA_000012245.1_ASM1224v1	16043691	B728a
Endozoicomonas ascidiicola	1698521	PRJNA291958	291958	Proteobacteria	Gammaproteobacteria	6.1305	47.1	-	LUTV01	36	4915	4547	5/18/16	8/28/17	Scaffold	Aarhus University	SAMN03956932	GCA_001646945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/646/945/GCA_001646945.1_AVMART05_1.0	-	AVMART05
[Propionibacterium] namnetense	1574624	PRJNA313504	313504	Terrabacteria group	Actinobacteria	2.36971	60.5	-	LWHO01	24	2272	2070	5/11/16	4/12/17	Scaffold	Nantes University Hospital	SAMN04524164	GCA_001642025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/025/GCA_001642025.1_ASM164202v1	27259292	NTS 31307302
Rhizobium aegyptiacum	1764550	PRJNA321136	321136	Proteobacteria	Alphaproteobacteria	7.35116	60.5	-	LYPM01	172	7159	6719	6/13/16	4/12/17	Contig	University of Minnesota	SAMN04966276	GCA_001662105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/105/GCA_001662105.1_ASM166210v1	-	950
Pseudoalteromonas mariniglutinosa	206042	PRJDB4787	321406	Proteobacteria	Gammaproteobacteria	5.02782	40.8	-	BDDU01	45	4410	4246	5/11/16	4/17/17	Contig	Korea Polar Research Institute	SAMD00051357	GCA_001662245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/245/GCA_001662245.1_ASM166224v1	-	KCTC 22327
Halomonas sinaiensis	379597	PRJDB4878	323837	Proteobacteria	Gammaproteobacteria	3.47709	63.6	-	BDEO01	25	3288	3195	6/1/16	4/12/17	Contig	Korea Polar Research Institute	SAMD00052838	GCA_001662285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/285/GCA_001662285.1_ASM166228v1	-	DSM 18067
Agrobacterium tumefaciens	358	PRJNA309196	309196	Proteobacteria	Alphaproteobacteria	5.4816	59.1633	chromosome circular:NZ_CP014259.1/CP014259.1; chromosome linear:NZ_CP014260.1/CP014260.1	-	2	5278	5068	2/8/16	4/4/17	Complete Genome	Shandong University	SAMN04423123	GCA_001551895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/551/895/GCA_001551895.1_ASM155189v1	-	S33
Mycobacterium acapulcensis	114977	PRJEB14254	324471	Terrabacteria group	Actinobacteria	5.28689	66.6	-	FLMU01	29	5137	4742	6/7/16	4/17/17	Scaffold	URMITE	SAMEA4022018	GCA_900089125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/125/GCA_900089125.1_PRJEB14254	-	CSURP1424
Mycobacterium brumae	85968	PRJEB12760	314410	Terrabacteria group	Actinobacteria	4.02601	69.1	-	FJNX01	75	3882	3665	3/6/16	8/1/17	Contig	FISABIO - Public Health	SAMEA3874519	GCA_900073015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/015/GCA_900073015.1_MBR1	-	-
Romboutsia sp. CCRI-19649	2020949	PRJNA393817	393817	Terrabacteria group	Firmicutes	4.13459	29.3	-	NOJY01	151	4032	3825	8/14/17	8/16/17	Contig	CHU de Quebec - Universite Laval	SAMN07342114	GCA_002250835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/835/GCA_002250835.1_ASM225083v1	-	CCRI-19649
Alcanivorax nanhaiticus	1177154	PRJNA161035	161035	Proteobacteria	Gammaproteobacteria	4.1328	56.4	-	ARXV01	35	3822	3730	9/23/14	4/9/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN03076215	GCA_000756665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/665/GCA_000756665.1_ASM75666v1	-	19-m-6
Tamlana sp. s12	1630406	PRJNA278102	278102	FCB group	Bacteroidetes/Chlorobi group	3.65207	35	-	LDKC01	44	3162	3074	6/20/16	4/12/17	Contig	Shandong Univesity	SAMN03406602	GCA_001672305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/305/GCA_001672305.1_ASM167230v1	-	s12
Micromonospora narathiwatensis	299146	PRJEB14333	324782	Terrabacteria group	Actinobacteria	6.61206	72.6	chromosome I:NZ_LT594324.1/LT594324.1	-	1	5860	5649	6/16/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04488479	GCA_900089605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/605/GCA_900089605.1_IMG-taxon_2617270834_annotated_assembly	-	DSM 45248
Orrella dioscoreae	1851544	PRJEB13663	322409	Proteobacteria	Betaproteobacteria	4.82574	67.4	-	FLRC01	56	4426	4311	6/16/16	4/13/17	Contig	UZH	SAMEA4026966	GCA_900089455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/455/GCA_900089455.1_OrrDiv1	-	-
Micromonospora sediminicola	946078	PRJEB14335	324781	Terrabacteria group	Actinobacteria	6.8857	73.6	-	FLRH01	5	6378	6135	6/17/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488363	GCA_900089585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/585/GCA_900089585.1_IMG-taxon_2622736535_annotated_assembly	-	DSM 45794
Micromonospora auratinigra	261654	PRJEB14334	324780	Terrabacteria group	Actinobacteria	6.7586	73.6	chromosome I:NZ_LT594323.1/LT594323.1	-	1	6183	5959	6/16/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04488294	GCA_900089595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/595/GCA_900089595.1_IMG-taxon_2617270871_annotated_assembly	-	DSM 44815
Paraburkholderia tropica	92647	PRJNA320021	320021	Proteobacteria	Betaproteobacteria	8.90513	64.7	-	LXGI01	148	7827	7506	6/21/16	4/13/17	Scaffold	Indian Institute of Horticultural Research	SAMN04914482	GCA_001673675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/675/GCA_001673675.1_ASM167367v1	-	P-31
Wolbachia endosymbiont of Nomada flava	1854759	PRJNA322628	322628	Proteobacteria	Alphaproteobacteria	1.33278	35.2	-	LYUW01	167	1307	1090	6/23/16	4/12/17	Contig	University of Liverpool	SAMN05171506	GCA_001675695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/695/GCA_001675695.1_ASM167569v1	-	wNfla
Wolbachia endosymbiont of Nomada leucophthalma	1854758	PRJNA322628	322628	Proteobacteria	Alphaproteobacteria	1.36672	35.2	-	LYUV01	182	1338	1123	6/23/16	4/12/17	Contig	University of Liverpool	SAMN05171505	GCA_001675715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/715/GCA_001675715.1_ASM167571v1	-	wNleu
Wolbachia endosymbiont of Nomada panzeri	1854760	PRJNA322628	322628	Proteobacteria	Alphaproteobacteria	1.34435	35.2	-	LYUX01	191	1318	1102	6/23/16	4/12/17	Contig	University of Liverpool	SAMN05171517	GCA_001675775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/775/GCA_001675775.1_ASM167577v1	-	wNpa
Wolbachia endosymbiont of Nomada ferruginata	1854761	PRJNA322628	322628	Proteobacteria	Alphaproteobacteria	1.33764	35.2	-	LYUY01	231	1312	1078	6/23/16	4/12/17	Scaffold	University of Liverpool	SAMN05171518	GCA_001675785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/785/GCA_001675785.1_ASM167578v1	-	wNfe
Xanthomarina gelatinilytica	1137281	PRJNA178952	178952	FCB group	Bacteroidetes/Chlorobi group	3.05548	35.4	-	ANLA01	47	2812	2743	3/22/13	4/8/17	Contig	Institute of Microbial Technology	SAMN01940371	GCA_000348685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/685/GCA_000348685.1_Formosa_sp._AK20	-	AK20
Rhizobium sp. IRBG74	424182	PRJEB4411	222458	Proteobacteria	Alphaproteobacteria	5.46498	59.1073	chromosome I:NC_022535.1/HG518322.1; chromosome II:NC_022545.1/HG518323.1; plasmid III:NC_022536.1/HG518324.1	-	3	5287	5082	10/9/13	4/17/17	Complete Genome	NATIONALCENTERFORGENOMERESOURCES	SAMEA3138824	GCA_000499645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/645/GCA_000499645.1_IRBG74	24265489	IRBG74
Bifidobacterium breve	1685	PRJNA270903	270903	Terrabacteria group	Actinobacteria	2.42601	59.1056	chromosome:NZ_CP010413.1/CP010413.1; plasmid pBR3:NZ_CP010414.1/CP010414.1	-	2	2201	1987	9/14/15	4/4/17	Complete Genome	Yonsei University	SAMN03271681	GCA_001281425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/425/GCA_001281425.1_ASM128142v1	-	BR3
Gallibacterium genomosp. 3	505345	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.45286	36.6	-	JTJR01	55	2296	2170	7/2/16	4/13/17	Contig	University of Copenhagen	SAMN03220405	GCA_001678475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/475/GCA_001678475.1_Gal30	-	59/S3/89
Acidobacteria bacterium Mor1	1660251	PRJNA285121	285121	Acidobacteria	unclassified Acidobacteria	5.98954	66.8	chromosome:CP011806.1	-	1	4816	4113	6/17/16	6/17/16	Chromosome	UCSD	SAMN03738170	GCA_001664505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/505/GCA_001664505.1_ASM166450v1	-	Mor1
Mycobacterium szulgai	1787	PRJNA299467	299467	Terrabacteria group	Actinobacteria	6.67266	65.8	-	LQPW01	178	5899	5496	4/20/17	5/3/17	Contig	University of Trento	SAMN04216953	GCA_002116635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/116/635/GCA_002116635.1_ASM211663v1	-	DSM 44166
Clostridium ragsdalei P11	1353534	PRJNA309366	309366	Terrabacteria group	Firmicutes	4.42499	31	-	LROS01	79	4016	3812	6/22/16	4/17/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04432160	GCA_001675165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/165/GCA_001675165.1_ASM167516v1	27458439	P11
Tepidimonas fonticaldi	1101373	PRJNA324007	324007	Proteobacteria	Betaproteobacteria	2.74128	69.5	-	LZDH01	67	2578	2457	6/22/16	4/13/17	Contig	Institute of Microbial Technology	SAMN05194366	GCA_001675355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/355/GCA_001675355.1_Tepfon1.0	-	PL17
Kushneria konosiri	698828	PRJNA383456	383456	Proteobacteria	Gammaproteobacteria	3.58463	59.1	chromosome:NZ_CP021323.1/CP021323.1	-	1	3329	3174	5/22/17	5/24/17	Complete Genome	Kyung Hee University	SAMN06765533	GCA_002155145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/145/GCA_002155145.1_ASM215514v1	-	X49
Granulibacter bethesdensis	364410	PRJNA352786	352786	Proteobacteria	Alphaproteobacteria	2.70845	59.1	chromosome:NZ_CP018195.1/CP018195.1	-	1	2470	2382	12/6/16	8/31/17	Complete Genome	"Igenbio, Inc"	SAMN05992017	GCA_001889465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/465/GCA_001889465.1_ASM188946v1	-	NIH1.4
Salinicoccus sediminis	1432562	PRJNA279835	279835	Terrabacteria group	Firmicutes	2.59128	48.7	-	LAYZ01	26	2639	2523	5/1/15	4/10/17	Contig	Institute of Microbial Technology	SAMN03450945	GCA_000986795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/986/795/GCA_000986795.1_ASM98679v1	-	SV-16
Rathayibacter tanaceti	1671680	PRJNA287312	287312	Terrabacteria group	Actinobacteria	3.16888	70.7	-	LIIN01	331	3134	2511	4/29/16	4/12/17	Contig	G.K.Skryabin IBPM RAS	SAMN03782040	GCA_001634385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/385/GCA_001634385.1_Rathayibacter_sp_VKM_Ac-2596_assembly_vl	27313291	VKM Ac-2596
Granulibacter bethesdensis	364410	PRJNA347332	347332	Proteobacteria	Alphaproteobacteria	2.70975	59.1	chromosome:NZ_CP018190.1/CP018190.1	-	1	2470	2382	12/6/16	8/28/17	Complete Genome	"Igenbio, Inc"	SAMN05878969	GCA_001889485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/485/GCA_001889485.1_ASM188948v1	-	NIH5.1
Mycobacterium scrofulaceum	1783	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.5369	68.4	-	LZJW01	183	5253	4978	6/17/16	4/13/17	Contig	JCVI	SAMN04634219	GCA_001667885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/885/GCA_001667885.1_ASM166788v1	-	E3039
Gallibacterium salpingitidis	505341	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.56908	37.3	-	JTJL01	96	2361	2258	7/2/16	4/13/17	Contig	University of Copenhagen	SAMN03218671	GCA_001678495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/495/GCA_001678495.1_Gal22	-	F150
Neomicrococcus aestuarii	556325	PRJNA341787	341787	Terrabacteria group	Actinobacteria	2.66784	59.1	chromosome:NZ_CP018135.1/CP018135.1	-	1	2412	2307	11/29/16	4/17/17	Complete Genome	"Southeast Chongqing Academy of Agricultural Sciences, Chongqing, 40030 P. R. China"	SAMN05728458	GCA_001887245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/245/GCA_001887245.1_ASM188724v1	-	B18
Flavobacteriaceae bacterium CP2B	1848192	PRJNA244670	244670	FCB group	Bacteroidetes/Chlorobi group	4.11663	50	-	LXTR01	93	3768	3621	7/12/16	4/13/17	Contig	US Naval Research laboratory	SAMN04917308	GCA_001683825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/825/GCA_001683825.1_ASM168382v1	-	CP2B
Marivirga sp. ANT-B6	1844760	PRJNA319586	319586	FCB group	Bacteroidetes/Chlorobi group	3.59954	41.3	-	LXQK01	255	-	-	7/12/16	7/12/16	Scaffold	CMEG University of Pretoria	SAMN04932544	GCA_001683905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/905/GCA_001683905.1_ANT-B6	-	-
Chryseobacterium arthrosphaerae	651561	PRJNA328195	328195	FCB group	Bacteroidetes/Chlorobi group	5.05334	38.3	-	MAYG01	36	4560	4458	7/13/16	4/17/17	Contig	Korea University	SAMN05366337	GCA_001684965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/684/965/GCA_001684965.1_ASM168496v1	-	CC-VM-7
Chryseobacterium artocarpi	1414727	PRJNA328196	328196	FCB group	Bacteroidetes/Chlorobi group	4.93561	34.8	-	MAYH01	51	4441	4323	7/13/16	4/13/17	Contig	Korea University	SAMN05366346	GCA_001684975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/684/975/GCA_001684975.1_ASM168497v1	-	UTM-3
Chryseobacterium contaminans	1423959	PRJNA328194	328194	FCB group	Bacteroidetes/Chlorobi group	4.70427	35.9	-	MAYF01	366	4321	4011	7/13/16	4/13/17	Contig	Korea University	SAMN05366335	GCA_001684955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/684/955/GCA_001684955.1_ASM168495v1	-	C-26
Gelidibacter algens	49280	PRJNA325407	325407	FCB group	Bacteroidetes/Chlorobi group	4.50695	37.3	-	LZRN01	140	3917	3673	7/3/16	4/17/17	Contig	University of Tasmania	SAMN05231771	GCA_001678675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/675/GCA_001678675.1_ASM167867v1	-	ACAM 536
Bizionia sp. APA-3	1861784	PRJNA325404	325404	FCB group	Bacteroidetes/Chlorobi group	3.52777	34.1	-	LZRO01	98	3297	3194	7/3/16	4/13/17	Contig	University of Tasmania	SAMN05231708	GCA_001678685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/685/GCA_001678685.1_ASM167868v1	-	APA-3
Acinetobacter gandensis	1443941	PRJNA323690	323690	Proteobacteria	Gammaproteobacteria	3.17636	39.7	-	LZDS01	30	3079	2892	7/3/16	4/6/17	Contig	National Institute of Public Health	SAMN05185381	GCA_001678755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/755/GCA_001678755.1_ASM167875v1	-	ANC 4275
Pseudomonas syringae pv. lapsa	199201	PRJNA286951	286951	Proteobacteria	Gammaproteobacteria	5.9189	59.1	chromosome:NZ_CP013183.1/CP013183.1	-	1	5318	5052	12/28/15	3/27/17	Complete Genome	Chinese Academy of Inspection and Quarantine	SAMN03774723	GCA_001482725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/725/GCA_001482725.1_ASM148272v1	26941133	ATCC 10859
Moraxella nonliquefaciens	478	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.27988	42	-	LXTW01	37	2170	2059	7/5/16	4/13/17	Scaffold	TAILORED-Treatment project	SAMN04994741	GCA_001679005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/005/GCA_001679005.1_ASM167900v1	-	CCUG 348
Intestinimonas butyriciproducens	1297617	PRJNA261376	261376	Terrabacteria group	Firmicutes	3.37648	59.1	chromosome:NZ_CP011307.1/CP011307.1	-	1	3273	3106	11/30/15	4/11/17	Complete Genome	Wageningen University	SAMN03072853	GCA_001454945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/945/GCA_001454945.1_ASM145494v1	26620920	AF211
Edwardsiella sp. EA181011	1578828	PRJNA268888	268888	Proteobacteria	Gammaproteobacteria	3.93417	59.1	chromosome:NZ_CP011364.1/CP011364.1	-	1	3588	3199	6/17/15	4/10/17	Complete Genome	LSU	SAMN03246002	GCA_000800725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/725/GCA_000800725.2_ASM80072v2	26205870	EA181011
Mycobacterium kumamotonense	354243	PRJNA354248	354248	Terrabacteria group	Actinobacteria	4.81585	68.1	-	MVHU01	128	4570	4356	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064243	GCA_002086285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/285/GCA_002086285.1_ASM208628v1	-	DSM 45093
Pluralibacter gergoviae	61647	PRJNA260760	260760	Proteobacteria	Gammaproteobacteria	5.48968	59.1	chromosome:NZ_CP009450.1/CP009450.1	-	1	5222	4927	9/25/14	4/2/17	Complete Genome	University of Malaya	SAMN03031196	GCA_000757785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/785/GCA_000757785.1_ASM75778v1	25502672	FB2
Synechococcus sp. KORDI-52	585425	PRJNA207984	207984	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.57207	59.1	chromosome:NZ_CP006271.1/CP006271.1	-	1	2696	2595	8/4/14	4/17/17	Complete Genome	Korea Institute of Ocean Science and Technology	SAMN02202185	GCA_000737595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/595/GCA_000737595.1_ASM73759v1	-	KORDI-52
Pseudoalteromonas fuliginea	1872678	PRJNA242743	242743	Proteobacteria	Gammaproteobacteria	4.76689	38.9	-	JJNZ01	314	4146	3955	5/12/14	4/9/17	Contig	Technical University of Denmark	SAMN02708809	GCA_000690055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/055/GCA_000690055.1_Afuliginea	-	KMM216
Tepidibacillus decaturensis	1413211	PRJNA224771	224771	Terrabacteria group	Firmicutes	2.96395	37	-	LSKU01	3	2840	2601	2/16/16	4/11/17	Scaffold	"University of Illinois, Urbana-Champaign"	SAMN04479994	GCA_001561915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/915/GCA_001561915.1_ASM156191v1	27056217	Z9
Trichococcus ilyis	640938	PRJEB12709	317995	Terrabacteria group	Firmicutes	3.14212	49	-	FJNB01	44	2984	2805	4/11/16	4/17/17	Scaffold	WAGENINGEN UNIVERSITY	SAMEA3872857	GCA_900067235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/067/235/GCA_900067235.1_Trichococcus_R210	-	-
Thermodesulfatator autotrophicus	1795632	PRJNA311114	311114	Thermodesulfobacteria	Thermodesulfobacteria	2.27096	43.1	-	LSFI01	129	2245	2128	5/11/16	4/12/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN04478079	GCA_001642325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/325/GCA_001642325.1_ASM164232v1	-	S606
Candidatus Symbiobacter mobilis CR	946483	PRJNA61809	61809	Proteobacteria	Betaproteobacteria	2.99184	59.1	chromosome:NC_022576.1/CP004885.1	-	1	2470	2337	10/21/13	4/9/17	Complete Genome	The Pennsylvania State University	SAMN02603948	GCA_000477435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/435/GCA_000477435.1_ASM47743v1	24267588	CR
Kyrpidia tusciae DSM 2912	562970	PRJNA31345	31345	Terrabacteria group	Firmicutes	3.38477	59.1	chromosome:NC_014098.1/CP002017.1	-	1	3355	3203	4/29/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00017498	GCA_000092905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/905/GCA_000092905.1_ASM9290v1	22180816	DSM 2912
Clostridium septicum	1504	PRJEB14692	327970	Terrabacteria group	Firmicutes	3.29897	27.5	-	FLTT01	79	3114	2925	7/8/16	4/13/17	Contig	URMITE	SAMEA4063107	GCA_900092375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/375/GCA_900092375.1_PRJEB146921	-	P1044
Micromonospora krabiensis	307121	PRJEB14505	326368	Terrabacteria group	Actinobacteria	7.07484	72.8	chromosome I:NZ_LT598496.1/LT598496.1	-	1	6498	6211	7/8/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04488466	GCA_900091425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/425/GCA_900091425.1_IMG-taxon_2617270872_annotated_assembly	-	DSM 45344
Xanthomonas bromi	56449	PRJEB14478	328719	Proteobacteria	Gammaproteobacteria	4.84133	64.1	-	FLTX01	134	4330	3759	7/12/16	4/17/17	Contig	CEBITEC	SAMEA4051541	GCA_900092025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/025/GCA_900092025.1_LMG947	-	-
Formosa haliotis	1555194	PRJDB4855	322825	FCB group	Bacteroidetes/Chlorobi group	4.3058	34.4	-	BDEL01	1	3653	3430	5/24/16	4/13/17	Contig	"Graduate School of Bioresources, Mie University"	SAMD00052035	GCA_001685485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/485/GCA_001685485.1_ASM168548v1	-	LMG 28520
Granulibacter bethesdensis CGDNIH1	391165	PRJNA17111	17111	Proteobacteria	Alphaproteobacteria	2.70836	59.1	chromosome:CP000394.1	-	1	2498	2437	9/13/06	1/31/14	Complete Genome	"Rocky Mountain Laboratories, National Institutes of Allergy and Infectious Disease, The National Institutes of Health"	SAMN02603769	GCA_000014285.1	REPR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/285/GCA_000014285.1_ASM1428v1	-	CGDNIH1
Mycobacterium malmoense	1780	PRJNA354248	354248	Terrabacteria group	Actinobacteria	5.29882	67	-	MVHV01	115	4944	4681	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064244	GCA_002086305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/305/GCA_002086305.1_ASM208630v1	-	IP1130001
Agrobacterium fabrum str. C58	176299	PRJNA283	283	Proteobacteria	Alphaproteobacteria	5.67426	59.0606	chromosome circular:NC_003062.2/AE007869.2; chromosome linear:NC_003063.2/AE007870.2; plasmid At:NC_003064.2/AE007872.2; plasmid Ti:NC_003065.3/AE007871.2	-	4	5459	5355	10/3/01	8/3/16	Complete Genome	Cereon	SAMN02603108	GCA_000092025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/025/GCA_000092025.1_ASM9202v1	"1,174,319,311,743,190"	C58
Marinomonas spartinae	1792290	PRJEB14223	327622	Proteobacteria	Gammaproteobacteria	4.71822	44.1	-	FLOB01	41	4379	4211	7/1/16	4/13/17	Contig	UVEG	SAMEA4029002	GCA_900089775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/775/GCA_900089775.1_MspartinaeCECT8886_SPAdes_Prokka	-	CECT 8886
Flavobacterium glycines	551990	PRJNA315783	315783	FCB group	Bacteroidetes/Chlorobi group	3.95883	34.1	-	LVEO01	32	3263	3180	7/18/16	4/13/17	Contig	Korea University	SAMN04570198	GCA_001686935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/935/GCA_001686935.1_ASM168693v1	-	NBRC 105008
Serratia marcescens	615	PRJNA299742	299742	Proteobacteria	Gammaproteobacteria	5.59489	59.0349	chromosome:NZ_CP013046.2/CP013046.2; plasmid unnamed1:NZ_CP013047.2/CP013047.2	-	2	5359	5150	10/28/15	3/11/17	Complete Genome	Mississippi State University	SAMN04214975	GCA_001417865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/865/GCA_001417865.2_ASM141786v2	-	B3R3
Dissulfuribacter thermophilus	1156395	PRJNA325715	325715	Proteobacteria	delta/epsilon subdivisions	2.5242	43.3	-	MAGO01	27	2339	2232	7/19/16	4/13/17	Contig	"Institute of Bioengineering, Research Center of Biotechnology of RAS"	SAMN05251087	GCA_001687335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/335/GCA_001687335.1_ASM168733v1	-	S69
Pararhizobium polonicum	1612624	PRJNA290179	290179	Proteobacteria	Alphaproteobacteria	6.26534	61.0684	plasmid pF5.1a:NZ_CM004502.1/CM004502.1; plasmid pF5.1b:NZ_CM004503.1/CM004503.1; plasmid pF5.1c:NZ_CM004504.1/CM004504.1	LGLV01	31	5917	5752	7/12/16	4/13/17	Contig	Research Institute of Horticulture	SAMN03877108	GCA_001687365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/365/GCA_001687365.1_ASM168736v1	27026286	F5.1
Corynebacterium striatum	43770	PRJNA386621	386621	Terrabacteria group	Actinobacteria	2.79769	59.0217	chromosome:NZ_CP021252.1/CP021252.1; plasmid pCs-Na-1:NZ_CP021253.1/CP021253.1; plasmid pCs-Na-2:NZ_CP021254.1/CP021254.1	-	3	2658	2491	5/23/17	5/25/17	Complete Genome	Korea Research Institute of Bioscience & Biotechnology	SAMN07109493	GCA_002156805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/805/GCA_002156805.1_ASM215680v1	-	KC-Na-01
Kushneria marisflavi	157779	PRJNA383457	383457	Proteobacteria	Gammaproteobacteria	3.66718	59	chromosome:NZ_CP021358.1/CP021358.1	-	1	3338	3206	5/24/17	5/26/17	Complete Genome	Kyung Hee University	SAMN06765534	GCA_002157205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/205/GCA_002157205.1_ASM215720v1	-	SW32
Nitrospira japonica	1325564	PRJEB18128	379799	Nitrospirae	Nitrospira	4.08482	59	chromosome I:NZ_LT828648.1/LT828648.1	-	1	3815	3734	3/22/17	4/3/17	Complete Genome	WASEDA university	SAMEA17758918	GCA_900169565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/565/GCA_900169565.1_NSJP_Ch1	-	-
Bifidobacterium breve	1685	PRJNA369572	369572	Terrabacteria group	Actinobacteria	2.4034	59	chromosome:NZ_CP019596.1/CP019596.1	-	1	2146	1953	2/8/17	4/6/17	Complete Genome	Korea University	SAMN06240351	GCA_001990225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/225/GCA_001990225.1_ASM199022v1	-	LMC520
Corynebacterium simulans	146827	PRJNA279606	279606	Terrabacteria group	Actinobacteria	2.73797	59	chromosome:NZ_CP014634.1/CP014634.1	-	1	2575	2414	3/10/16	4/12/17	Complete Genome	NHGRI	SAMN03455925	GCA_001586215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/215/GCA_001586215.1_ASM158621v1	26861018	PES1
Bacteroidales bacterium M1	1807729	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	3.13398	48.3	-	LUJL01	91	-	-	7/20/16	7/20/16	Scaffold	University of Queensland	SAMN04517336	GCA_001689425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/425/GCA_001689425.1_ASM168942v1	27388460	-
Bacteroidales bacterium M2	1807730	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	3.10229	49.2	-	LUJM01	123	-	-	7/20/16	7/20/16	Scaffold	University of Queensland	SAMN04517337	GCA_001689415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/415/GCA_001689415.1_ASM168941v1	27388460	-
Bacteroidales bacterium M3	1807731	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	2.41876	54.7	-	LUJN01	44	-	-	7/20/16	7/20/16	Scaffold	University of Queensland	SAMN04517338	GCA_001689445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/445/GCA_001689445.1_ASM168944v1	27388460	-
Bacteroidales bacterium M6	1807734	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	2.90808	50.6	-	LUJQ01	82	-	-	7/20/16	7/20/16	Scaffold	University of Queensland	SAMN04517341	GCA_001689485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/485/GCA_001689485.1_ASM168948v1	27388460	-
Bacteroidales bacterium M8	1807736	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	3.31081	55.9	-	LUJS01	53	-	-	7/20/16	7/20/16	Scaffold	University of Queensland	SAMN04517343	GCA_001689495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/495/GCA_001689495.1_ASM168949v1	27388460	-
Bacteroidales bacterium M5	1807733	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	2.49862	52.5	-	LUJP01	117	-	-	7/20/16	7/20/16	Scaffold	University of Queensland	SAMN04517340	GCA_001689535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/535/GCA_001689535.1_ASM168953v1	27388460	-
Bacteroidales bacterium M7	1807735	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	2.69745	50.8	-	LUJR01	49	-	-	7/20/16	7/20/16	Scaffold	University of Queensland	SAMN04517342	GCA_001689515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/515/GCA_001689515.1_ASM168951v1	27388460	-
Bacteroidales bacterium M12	1807740	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	2.72874	52.8	-	LUJW01	90	-	-	7/20/16	7/20/16	Scaffold	University of Queensland	SAMN04517347	GCA_001689575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/575/GCA_001689575.1_ASM168957v1	27388460	-
Bacteroidales bacterium M9	1807737	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	2.60341	48.9	-	LUJT01	121	-	-	7/20/16	7/20/16	Scaffold	University of Queensland	SAMN04517344	GCA_001689565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/565/GCA_001689565.1_ASM168956v1	27388460	-
Bacteroidales bacterium M13	1807741	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	2.31898	51.9	-	LUJX01	105	-	-	7/20/16	7/20/16	Scaffold	University of Queensland	SAMN04517348	GCA_001689585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/585/GCA_001689585.1_ASM168958v1	27388460	-
Bacteroidales bacterium M14	1807742	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	2.096	52.6	-	LUJY01	31	-	-	7/20/16	7/20/16	Scaffold	University of Queensland	SAMN04517349	GCA_001689615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/615/GCA_001689615.1_ASM168961v1	27388460	-
Bacteroidales bacterium K10	1807744	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	2.75173	51.2	-	LUKA01	46	-	-	7/20/16	7/20/16	Scaffold	University of Queensland	SAMN04517351	GCA_001689655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/655/GCA_001689655.1_ASM168965v1	27388460	-
Bacteroidales bacterium K1	1807743	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	4.45992	51.3	-	LUJZ01	137	-	-	7/20/16	7/20/16	Scaffold	University of Queensland	SAMN04517350	GCA_001689645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/645/GCA_001689645.1_ASM168964v1	27388460	-
Bacteroidales bacterium M11	1807739	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	2.95871	53.2	-	LUJV01	116	-	-	7/20/16	7/20/16	Scaffold	University of Queensland	SAMN04517346	GCA_001689665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/665/GCA_001689665.1_ASM168966v1	27388460	-
Bacteroidales bacterium M10	1807738	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	2.25057	56	-	LUJU01	111	-	-	7/20/16	7/20/16	Scaffold	University of Queensland	SAMN04517345	GCA_001689685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/685/GCA_001689685.1_ASM168968v1	27388460	-
Candidatus Erwinia dacicola	252393	PRJNA327679	327679	Proteobacteria	Gammaproteobacteria	2.69805	52.8	-	MAYS01	608	3199	2258	10/11/16	4/13/17	Contig	Hebrew University of Jerusalem	SAMN05355348	GCA_001756855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/855/GCA_001756855.1_ASM175685v1	-	IL
Collimonas pratensis	279113	PRJNA299267	299267	Proteobacteria	Betaproteobacteria	5.5859	59	chromosome:NZ_CP013236.1/CP013236.1	-	1	5058	4919	3/9/16	4/12/17	Complete Genome	Netherlands Institute of Ecology	SAMN04195678	GCA_001584225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/225/GCA_001584225.1_ASM158422v1	-	Ter291
Aliivibrio sp. 1S175	1840087	PRJNA318805	318805	Proteobacteria	Gammaproteobacteria	4.32026	38.7	-	MAJS01	99	3888	3750	7/21/16	4/13/17	Scaffold	Massachusetts Institute of Technology	SAMN04867933	GCA_001690985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/985/GCA_001690985.1_ASM169098v1	-	1S175
Microbacterium sediminis	904291	PRJNA320460	320460	Terrabacteria group	Actinobacteria	2.76001	71.9	-	LXMD01	24	2629	2532	7/21/16	4/17/17	Scaffold	The Third Institute of State Oceanic Administration	SAMN04939663	GCA_001689915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/915/GCA_001689915.1_ASM168991v1	-	YLB-01
Pantoea eucrina	472693	PRJNA252988	252988	Proteobacteria	Gammaproteobacteria	3.89238	56.3	-	MIPP01	109	3695	3363	4/18/17	8/4/17	Contig	University of Pretoria	SAMN05757669	GCA_002095385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/385/GCA_002095385.1_ASM209538v1	28255640	LMG 5346
Collimonas fungivorans	158899	PRJNA299268	299268	Proteobacteria	Betaproteobacteria	5.59973	59	chromosome:NZ_CP013232.1/CP013232.1	-	1	5013	4777	3/9/16	4/12/17	Complete Genome	Netherlands Institute of Ecology	SAMN04195674	GCA_001584145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/145/GCA_001584145.1_ASM158414v1	-	Ter6
Pseudomonas fluorescens NCIMB 11764	1221522	PRJNA172562	172562	Proteobacteria	Gammaproteobacteria	6.99815	59	chromosome:NZ_CP010945.1/CP010945.1	-	1	6492	6256	8/7/15	4/4/17	Complete Genome	University of North Texas	SAMN01112396	GCA_000293885.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/885/GCA_000293885.3_ASM29388v3	"2,314,437,926,430,030"	NCIMB 11764
Tenacibaculum soleae	447689	PRJNA326781	326781	FCB group	Bacteroidetes/Chlorobi group	3.007	30.2	-	MAKX01	45	2815	2727	7/25/16	4/17/17	Contig	UC Davis	SAMN05292508	GCA_001693415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/415/GCA_001693415.1_ASM169341v1	-	UCD-KL19
Bradyrhizobium paxllaeri	190148	PRJNA325366	325366	Proteobacteria	Alphaproteobacteria	8.29061	62.5	-	MAXB01	146	7868	7499	7/25/16	4/17/17	Contig	Universidad Nacional Agraria La Molina	SAMN05230119	GCA_001693515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/515/GCA_001693515.1_ASM169351v1	-	LMTR 21
Criibacterium bergeronii	1871336	PRJNA328117	328117	Terrabacteria group	Firmicutes	2.38446	33.8	-	MBEW01	19	2373	2202	7/26/16	8/21/17	Contig	CHU de Quebec - Universite Laval	SAMN05363827	GCA_001693775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/775/GCA_001693775.1_ASM169377v1	27587833	CCRI-22567
Tessaracoccus lapidicaptus	1427523	PRJNA330664	330664	Terrabacteria group	Actinobacteria	3.08803	70.5	-	MBQD01	27	2848	2742	7/26/16	4/13/17	Contig	Centro Nacional de Biotecnología (CSIC)	SAMN05420409	GCA_001693815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/815/GCA_001693815.1_ASM169381v1	-	IPBSL-7
Erysipelotrichaceae bacterium MTC7	1768196	PRJNA317357	317357	Terrabacteria group	Firmicutes	2.47838	37.2	-	LVZN01	84	2433	2341	7/28/16	4/13/17	Contig	USDA	SAMN04606316	GCA_001695645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/645/GCA_001695645.1_ASM169564v1	-	MTC7
Stappia indica	538381	PRJNA328866	328866	Proteobacteria	Alphaproteobacteria	5.00904	67	-	MBQE01	17	4545	4469	7/29/16	7/11/17	Contig	National University of Colombia	SAMN05382876	GCA_001696535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/535/GCA_001696535.1_ASM169653v1	-	SBBC 49
Nosocomiicoccus ampullae	489910	PRJNA316969	316969	Terrabacteria group	Firmicutes	1.57804	36.3	-	MBFG01	32	1629	1544	7/29/16	4/17/17	Scaffold	Loyola University Chicago	SAMN05371532	GCA_001696685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/685/GCA_001696685.1_ASM169668v1	-	LUREC
Anaerococcus rubeinfantis	1720199	PRJEB11862	304136	Terrabacteria group	Firmicutes	1.92916	29.5	-	FAVH01	3	1855	1751	11/29/15	8/22/17	Scaffold	URMITE	SAMEA3673146	GCA_001487145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/145/GCA_001487145.1_Anaerococcus_rubiinfantis	-	-
Granulibacter bethesdensis	364410	PRJNA68629	68629	Proteobacteria	Alphaproteobacteria	2.74267	59	chromosome:NZ_CP003183.2/CP003183.2	-	1	2517	2429	2/20/14	9/4/17	Complete Genome	Integrated Genomics	SAMN03081435	GCA_000576185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/185/GCA_000576185.2_ASM57618v2	-	NIH2.1
Vibrio cidicii	1763883	PRJNA304180	304180	Proteobacteria	Gammaproteobacteria	4.76034	47.9	-	LOMK01	2	4578	3213	3/25/16	4/20/17	Contig	University of Alberta	SAMN04325238	GCA_001597655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/655/GCA_001597655.1_ASM159765v1	-	2756-81
Vibrio atlanticus	693153	PRJEB14353	329210	Proteobacteria	Gammaproteobacteria	4.99079	43.9	-	FLQP01	100	4595	4248	7/16/16	4/17/17	Scaffold	UVEG	SAMEA4029004	GCA_900089855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/855/GCA_900089855.1_VatlanticusCECT7223_Velvet_Prokka	-	CECT 7223
Vibrio celticus	446372	PRJNA375724	375724	Proteobacteria	Gammaproteobacteria	5.32193	44.4	-	MVJF01	233	4703	4423	5/22/17	5/24/17	Contig	Universiti Teknologi Malaysia	SAMN06344327	GCA_002156525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/525/GCA_002156525.1_ASM215652v1	-	Rd 8.15
Nitrospira defluvii	330214	PRJEA46433	46433	Nitrospirae	Nitrospira	4.31708	59	chromosome:NC_014355.1/FP929003.1	-	1	4030	3945	7/13/10	5/18/17	Complete Genome	Genoscope / CEA	SAMEA2272290	GCA_000196815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/815/GCA_000196815.1_ASM19681v1	20624973	-
Arthrobacter sp. IHBB 11108	1618207	PRJNA276066	276066	Terrabacteria group	Actinobacteria	3.59943	58.9962	chromosome:NZ_CP011005.1/CP011005.1; plasmid pAG001:NZ_CP011006.1/CP011006.1	-	2	3396	3306	3/11/15	4/10/17	Complete Genome	CSIR-Institute of Himalayan Bioresource Technology	SAMN03366954	GCA_000950575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/575/GCA_000950575.1_ASM95057v1	25908143	IHBB 11108
Xanthomonas cannabis pv. phaseoli	1885902	PRJNA262934	262934	Proteobacteria	Gammaproteobacteria	4.88538	65.7	-	JRQI01	91	4248	4000	10/8/14	4/6/17	Scaffold	University of Exeter	SAMN03092876	GCA_000764855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/855/GCA_000764855.1_NyagatareV1	25688063	Nyagatare
Burkholderia sp. PAMC 26561	1795043	PRJNA310663	310663	Proteobacteria	Betaproteobacteria	7.43192	58.9842	chromosome 1:NZ_CP014306.1/CP014306.1; chromosome 2:NZ_CP014307.1/CP014307.1; plasmid unnamed1:NZ_CP014308.1/CP014308.1; plasmid unnamed2:NZ_CP014309.1/CP014309.1; plasmid unnamed3:NZ_CP014310.1/CP014310.1; plasmid unnamed4:NZ_CP014311.1/CP014311.1; plasmid unnamed5:NZ_CP014312.1/CP014312.1	-	7	6861	6361	2/10/16	4/12/17	Complete Genome	Korea Polar Research Institute	SAMN04453248	GCA_001557535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/535/GCA_001557535.1_ASM155753v1	-	PAMC 26561
Pseudomonas mandelii JR-1	1147786	PRJNA83441	83441	Proteobacteria	Gammaproteobacteria	7.18856	58.9659	chromosome:NZ_CP005960.1/CP005960.1; plasmid unnamed:NZ_CP005961.1/CP005961.1	-	2	6695	6435	5/15/14	4/9/17	Complete Genome	Daegu University	SAMN02469697	GCA_000257545.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/545/GCA_000257545.3_ASM25754v3	22628497	JR-1
Pseudomonas syringae pv. syringae HS191	1324932	PRJNA198196	198196	Proteobacteria	Gammaproteobacteria	6.00276	58.9597	chromosome:NZ_CP006256.1/CP006256.1; plasmid unnamed:NZ_CP006257.1/CP006257.1	-	2	5451	5127	5/6/15	3/26/17	Complete Genome	Texas A&M University	SAMN03267749	GCA_000988395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/395/GCA_000988395.1_ASM98839v1	25940918	HS191
Caballeronia peredens	1777132	PRJEB12482	309804	Proteobacteria	Betaproteobacteria	6.72608	63.1	-	FCOH02	78	6223	6040	1/28/16	9/19/17	Contig	LM-UGent	SAMEA3731258	GCA_001544595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/595/GCA_001544595.2_ASM154459v2	-	-
Caballeronia concitans	1777133	PRJEB12483	309805	Proteobacteria	Betaproteobacteria	6.16617	63.2	-	FCNV02	47	5668	5484	1/28/16	9/19/17	Contig	LM-UGent	SAMEA3731259	GCA_001544615.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/615/GCA_001544615.2_ASM154461v2	-	-
Caballeronia turbans	1777134	PRJEB12484	309806	Proteobacteria	Betaproteobacteria	7.35255	63.1	-	FCOD02	120	6931	6555	1/28/16	9/19/17	Contig	LM-UGent	SAMEA3731260	GCA_001544655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/655/GCA_001544655.2_ASM154465v2	-	-
Caballeronia arvi	1777135	PRJEB12485	309807	Proteobacteria	Betaproteobacteria	9.66577	62.4	-	FCOM02	351	8993	8477	1/28/16	9/19/17	Contig	LM-UGent	SAMEA3731261	GCA_001544695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/695/GCA_001544695.2_ASM154469v2	-	-
Caballeronia catudaia	1777136	PRJEB12486	309808	Proteobacteria	Betaproteobacteria	7.72673	62.8	-	FCOF02	156	7322	6823	1/28/16	9/19/17	Contig	LM-UGent	SAMEA3731262	GCA_001544755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/755/GCA_001544755.2_ASM154475v2	-	-
Caballeronia pedi	1777141	PRJEB12492	309813	Proteobacteria	Betaproteobacteria	9.14131	63	-	FCOE02	142	8563	8237	1/28/16	9/19/17	Contig	LM-UGent	SAMEA3731267	GCA_001544915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/915/GCA_001544915.2_ASM154491v2	-	-
Caballeronia arationis	1777142	PRJEB12493	309814	Proteobacteria	Betaproteobacteria	9.37749	62.8	-	FCOG02	629	8697	7862	1/28/16	9/19/17	Contig	LM-UGent	SAMEA3731268	GCA_001544975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/975/GCA_001544975.2_ASM154497v2	-	-
Caballeronia glebae	1777143	PRJEB12494	309815	Proteobacteria	Betaproteobacteria	7.84231	62.7	-	FCOJ02	194	7334	6932	1/28/16	9/19/17	Contig	LM-UGent	SAMEA3731269	GCA_001545035.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/035/GCA_001545035.2_ASM154503v2	-	-
Caballeronia ptereochthonis	1777144	PRJEB12495	309816	Proteobacteria	Betaproteobacteria	7.7148	64.2	-	FCOB02	117	7139	6769	1/28/16	9/20/17	Contig	LM-UGent	SAMEA3731270	GCA_001545075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/075/GCA_001545075.2_ASM154507v2	-	-
Caballeronia temeraria	1777137	PRJEB12488	309809	Proteobacteria	Betaproteobacteria	8.32552	62.7	-	FCOI02	129	7880	7496	1/28/16	9/19/17	Contig	LM-UGent	SAMEA3731263	GCA_001544795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/795/GCA_001544795.2_Burkholderia_sp._LMG_29319	-	-
Caballeronia fortuita	1777138	PRJEB12489	309810	Proteobacteria	Betaproteobacteria	7.36081	62.9	-	FCNX02	50	6931	6676	1/28/16	9/19/17	Contig	LM-UGent	SAMEA3731264	GCA_001544835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/835/GCA_001544835.2_Burkholderia_sp._LMG_29320	-	-
Caballeronia calidae	1777139	PRJEB12490	309811	Proteobacteria	Betaproteobacteria	9.60969	62.5	-	FCOX02	379	8800	8200	2/1/16	9/19/17	Contig	LM-UGent	SAMEA3731265	GCA_900044055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/055/GCA_900044055.2_Burkholderia_sp._LMG_29321	-	-
Caballeronia hypogeia	1777140	PRJEB12491	309812	Proteobacteria	Betaproteobacteria	8.33327	63.2	-	FCOA02	94	7714	7407	1/28/16	9/19/17	Contig	LM-UGent	SAMEA3731266	GCA_001544875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/875/GCA_001544875.2_Burkholderia_sp._LMG_29322	-	-
Enteractinococcus helveticum	1837282	PRJNA318866	318866	Terrabacteria group	Actinobacteria	3.67065	56.2	-	LXEY01	118	3421	3278	6/3/16	4/12/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN04869617	GCA_001657475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/475/GCA_001657475.1_ASM165747v1	27469945	UASWS1574
Candidatus Accumulibacter aalborgensis	1860102	PRJEB13978	324047	Proteobacteria	Betaproteobacteria	4.70707	62.3	-	FLQX01	181	4628	4558	6/16/16	6/16/16	Contig	"Department of Biotechnology, Chemistry and Environmental Engineering, Aalborg University"	SAMEA4032471	GCA_900089955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/955/GCA_900089955.1_A_S1_v1	-	-
Candidatus Propionivibrio aalborgensis	1860101	PRJEB13978	324047	Proteobacteria	Betaproteobacteria	3.79408	57.9	-	FLQY01	405	3717	3633	6/16/16	6/16/16	Contig	"Department of Biotechnology, Chemistry and Environmental Engineering, Aalborg University"	SAMEA4032470	GCA_900089945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/945/GCA_900089945.1_P_S1_v1	-	-
Limnothrix sp. CACIAM 69d	1890733	PRJNA344691	344691	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.69092	55.3	-	MKGP01	157	3862	3689	12/22/16	12/22/16	Contig	Universidade Federal do Para	SAMN05468010	GCA_001913845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/845/GCA_001913845.1_ASM191384v1	-	-
Campylobacter hepaticus	1813019	PRJNA314820	314820	Proteobacteria	delta/epsilon subdivisions	1.48238	27.9	-	LUKK01	39	1511	1377	7/19/16	4/13/17	Contig	RMIT University	SAMN04544305	GCA_001687475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/475/GCA_001687475.1_ASM168747v1	-	HV10
Labrenzia sp. CP4	1674922	PRJNA244670	244670	Proteobacteria	Alphaproteobacteria	6.0513	58.9495	chromosome:NZ_CP011927.1/CP011927.1; plasmid pBCL1:NZ_CP011928.1/CP011928.1	-	2	5589	5487	3/3/16	4/12/17	Complete Genome	US Naval Research laboratory	SAMN03785153	GCA_001579905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/905/GCA_001579905.1_ASM157990v1	27174270	CP4
Bacteroidales bacterium GP4	1807748	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	2.64788	47.1	-	DAAL01	276	-	-	8/9/16	8/9/16	Scaffold	University of Queensland	SAMN04517355	GCA_001701065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/065/GCA_001701065.1_ASM170106v1	27388460	-
Bacteroidales bacterium GP3	1807747	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	2.83784	44.5	-	DAAK01	238	-	-	8/9/16	8/9/16	Scaffold	University of Queensland	SAMN04517354	GCA_001701075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/075/GCA_001701075.1_ASM170107v1	27388460	-
Bacteroidales bacterium GP1	1807745	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	2.16508	47.4	-	DAAI01	64	-	-	8/9/16	8/9/16	Scaffold	University of Queensland	SAMN04517352	GCA_001701105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/105/GCA_001701105.1_ASM170110v1	27388460	-
Bacteroidales bacterium GP2	1807746	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	2.39216	47.2	-	DAAJ01	133	-	-	8/9/16	8/9/16	Scaffold	University of Queensland	SAMN04517353	GCA_001701115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/115/GCA_001701115.1_ASM170111v1	27388460	-
Bacteroidales bacterium H3	1807751	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	2.39959	54.3	-	DAAN01	30	-	-	8/9/16	8/9/16	Scaffold	University of Queensland	SAMN04517358	GCA_001701135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/135/GCA_001701135.1_ASM170113v1	27388460	-
Bacteroidales bacterium H4	1807752	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	2.56996	51.4	-	DAAP01	65	-	-	8/9/16	8/9/16	Contig	University of Queensland	SAMN04517359	GCA_001701165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/165/GCA_001701165.1_ASM170116v1	27388460	-
Bacteroidales bacterium H1	1807749	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	2.37606	50.9	-	DAAM01	42	-	-	8/9/16	8/9/16	Scaffold	University of Queensland	SAMN04517356	GCA_001701175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/175/GCA_001701175.1_ASM170117v1	27388460	-
Bacteroidales bacterium H7	1807755	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	2.84483	48.9	-	DAAS01	54	-	-	8/9/16	8/9/16	Scaffold	University of Queensland	SAMN04517362	GCA_001701195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/195/GCA_001701195.1_ASM170119v1	27388460	-
Bacteroidales bacterium H5	1807753	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	2.55713	56.4	-	DAAQ01	50	-	-	8/9/16	8/9/16	Scaffold	University of Queensland	SAMN04517360	GCA_001701225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/225/GCA_001701225.1_ASM170122v1	27388460	-
Bacteroidales bacterium H9	1807757	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	2.08719	50.9	-	DAAU01	48	-	-	8/9/16	8/9/16	Scaffold	University of Queensland	SAMN04517364	GCA_001701235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/235/GCA_001701235.1_ASM170123v1	27388460	-
Bacteroidales bacterium H2	1807750	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	1.97365	55.1	-	DAAO01	58	-	-	8/9/16	8/9/16	Scaffold	University of Queensland	SAMN04517357	GCA_001701255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/255/GCA_001701255.1_ASM170125v1	27388460	-
Bacteroidales bacterium H6	1807754	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	2.5338	52.2	-	DAAR01	60	-	-	8/9/16	8/9/16	Scaffold	University of Queensland	SAMN04517361	GCA_001701285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/285/GCA_001701285.1_ASM170128v1	27388460	-
Bacteroidales bacterium H8	1807756	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	2.41718	50	-	DAAT01	61	-	-	8/9/16	8/9/16	Scaffold	University of Queensland	SAMN04517363	GCA_001701305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/305/GCA_001701305.1_ASM170130v1	27388460	-
Bacteroidales bacterium H10	1807758	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	2.90777	48.1	-	DAAV01	174	-	-	8/9/16	8/9/16	Scaffold	University of Queensland	SAMN04517365	GCA_001701295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/295/GCA_001701295.1_ASM170129v1	27388460	-
Eubacteriaceae bacterium CHKCI004	1780380	PRJEB12388	318233	Terrabacteria group	Firmicutes	3.99126	46.5	-	FCNR01	87	3759	3572	4/11/16	8/1/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA3730082	GCA_900016875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/875/GCA_900016875.1_CHKCI004	-	-
Coriobacteriaceae bacterium CHKCI002	1780377	PRJEB12386	318231	Terrabacteria group	Actinobacteria	3.48212	64.7	-	FCNB01	264	2869	2667	4/11/16	8/1/17	Contig	UNIVERSITY OF WARWICK	SAMEA3730080	GCA_900044025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/025/GCA_900044025.1_CHCKI002	-	-
Eubacteriaceae bacterium CHKCI005	1780381	PRJEB12389	318235	Terrabacteria group	Firmicutes	2.49263	50.2	-	FJVJ01	46	2317	2211	4/11/16	8/1/17	Contig	UNIVERSITY OF WARWICK	SAMEA3730083	GCA_900067065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/067/065/GCA_900067065.1_CHCKI005	-	-
Clostridiales bacterium CHKCI006	1780379	PRJEB12390	318230	Terrabacteria group	Firmicutes	3.33521	42.8	-	FCNA01	165	3404	3164	4/11/16	8/1/17	Contig	UNIVERSITY OF WARWICK	SAMEA3730084	GCA_900018345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/345/GCA_900018345.1_CHKCI006	-	-
Roseobacter denitrificans OCh 114	375451	PRJNA16426	16426	Proteobacteria	Alphaproteobacteria	4.33123	58.9096	chromosome:NC_008209.1/CP000362.1; plasmid pTB1:NC_008386.1/CP000464.1; plasmid pTB2:NC_008387.1/CP000465.1; plasmid pTB3:NC_008388.1/CP000466.1; plasmid pTB4:NC_008389.1/CP000467.1	-	5	4092	4004	6/22/06	5/19/17	Complete Genome	Arizona State University/TGen	SAMN02602987	GCA_000014045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/045/GCA_000014045.1_ASM1404v1	17098896	OCh 114
Oscillatoriales cyanobacterium USR001	1880991	PRJNA329643	329643	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.87279	40.9	-	MBRE01	96	5185	4908	8/3/16	8/3/16	Scaffold	Singapore-MIT Alliance for Research and Technology	SAMN05416373	GCA_001698425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/425/GCA_001698425.1_ASM169842v1	-	-
Caryophanon tenue	33978	PRJNA319300	319300	Terrabacteria group	Firmicutes	3.34096	39.9	-	MASJ01	42	3195	3104	8/5/16	4/17/17	Contig	CSIR-Institute of Microbial Technology	SAMN04884678	GCA_001700315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/315/GCA_001700315.1_ASM170031v1	-	DSM 14152
Caryophanon latum	33977	PRJNA319298	319298	Terrabacteria group	Firmicutes	3.59059	42.7	-	MATO01	97	3267	3135	8/5/16	4/17/17	Contig	CSIR-Institute of Microbial Technology	SAMN04884672	GCA_001700325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/325/GCA_001700325.1_ASM170032v1	-	DSM 14151
Paenibacillus pectinilyticus	512399	PRJNA321950	321950	Terrabacteria group	Firmicutes	7.87793	45.7	-	LYPC01	32	6732	6517	8/5/16	4/17/17	Scaffold	Chinese Academy of agricultural Sciences(CAAS)	SAMN05006820	GCA_001700435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/435/GCA_001700435.1_ASM170043v1	-	KCTC13222
Streptomyces mutomycini	284036	PRJNA293375	293375	Terrabacteria group	Actinobacteria	7.07004	70.6	-	MAPV01	410	6185	5697	8/5/16	3/13/17	Scaffold	USDA/ARS/NCAUR	SAMN05326639	GCA_001700505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/505/GCA_001700505.1_ASM170050v1	-	NRRL B-65393
Streptomyces lushanensis	1434255	PRJNA293375	293375	Terrabacteria group	Actinobacteria	7.54211	70.7	-	MAUD01	732	6523	5877	8/5/16	3/13/17	Scaffold	USDA/ARS/NCAUR	SAMN05326726	GCA_001700515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/515/GCA_001700515.1_ASM170051v1	-	NRRL B-24994
Streptomyces minutiscleroticus	68238	PRJNA327778	327778	Terrabacteria group	Actinobacteria	6.51237	70.5	-	MAZZ01	1915	-	-	8/5/16	8/5/16	Scaffold	Maharaja Sayajirao University of Baroda	SAMN05371020	GCA_001700545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/545/GCA_001700545.1_ASM170054v1	-	11008
Rhizobium favelukesii	348824	PRJEB4920	237688	Proteobacteria	Alphaproteobacteria	7.03881	59.5503	chromosome I:NZ_HG916852.1/HG916852.1; plasmid II:NZ_HG916853.1/HG916853.1; plasmid IV:NZ_HG916854.1/HG916854.1; plasmid V:NZ_HG916855.1/HG916855.1; plasmid pLPU83b:CBYB000000000.1	CBYB01	4	8202	7513	2/11/14	4/11/17	Chromosome	CEBITEC	SAMEA3138925	GCA_000577275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/275/GCA_000577275.1_LPU83	-	LPU83
Williamsia herbipolensis	1603258	PRJNA272726	272726	Terrabacteria group	Actinobacteria	4.74496	68.6	-	JXYP01	50	4441	4264	3/27/15	4/10/17	Contig	University of Wuerzburg	SAMN03323777	GCA_000964005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/005/GCA_000964005.1_WiARP1.0	26779305	ARP1
Croceicoccus pelagius	1703341	PRJNA322659	322659	Proteobacteria	Alphaproteobacteria	3.30653	62.8	-	LYWY01	40	3200	3055	6/13/16	4/12/17	Scaffold	"Second Institute of Oceanography, State Oceanic Administration"	SAMN05176186	GCA_001661915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/661/915/GCA_001661915.1_ASM166191v1	-	Ery9
Croceicoccus mobilis	1703339	PRJNA322659	322659	Proteobacteria	Alphaproteobacteria	4.21008	62.5	-	LYWZ01	32	3999	3835	6/13/16	4/12/17	Contig	"Second Institute of Oceanography, State Oceanic Administration"	SAMN05176184	GCA_001661965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/661/965/GCA_001661965.1_ASM166196v1	-	Ery22
Microbulbifer aggregans	1769779	PRJNA305828	305828	Proteobacteria	Gammaproteobacteria	3.86433	58.9	chromosome:NZ_CP014143.1/CP014143.1	-	1	3400	3298	9/30/16	4/13/17	Complete Genome	Universiti Sains Malaysia	SAMN04334609	GCA_001750105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/105/GCA_001750105.1_ASM175010v1	-	CCB-MM1
Rhizobium lusitanum	293958	PRJEB14985	336133	Proteobacteria	Alphaproteobacteria	7.92197	59.6	-	FMAF01	79	7689	7288	8/3/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487812	GCA_900094565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/565/GCA_900094565.1_IMG-taxon_2615840626_annotated_assembly	-	P1-7
Rhizobium miluonense	411945	PRJEB14986	336134	Proteobacteria	Alphaproteobacteria	6.80805	59.7	-	FMAH01	103	6489	6178	8/3/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487813	GCA_900094545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/545/GCA_900094545.1_IMG-taxon_2617270742_annotated_assembly	-	HAMBI 2971
Cupriavidus alkaliphilus	942866	PRJEB14989	336139	Proteobacteria	Betaproteobacteria	6.12505	67.8	-	FMAD01	34	5568	5432	8/3/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05417690	GCA_900094595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/595/GCA_900094595.1_IMG-taxon_2671180232_annotated_assembly	-	ASC-732
Rhizobium multihospitium	410764	PRJEB14987	336140	Proteobacteria	Alphaproteobacteria	7.31988	59.8	-	FMAG01	19	6924	6780	8/3/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487814	GCA_900094585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/585/GCA_900094585.1_IMG-taxon_2615840698_annotated_assembly	-	HAMBI 2975
Chitinophaga costaii	1335309	PRJEB15011	336309	FCB group	Bacteroidetes/Chlorobi group	5.07444	47.6	-	FMAR01	56	4183	4067	8/3/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216457	GCA_900094705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/705/GCA_900094705.1_IMG-taxon_2671180112_annotated_assembly	-	A37T2
Kosakonia oryzendophytica	1005665	PRJEB9821	382651	Proteobacteria	Gammaproteobacteria	4.87878	53.7	-	FYBE01	112	4643	4471	6/9/17	6/21/17	Contig	JUSTUS LIEBIG UNIVERSITY	SAMEA104113919	GCA_900185945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/945/GCA_900185945.1_ASM90018594v1	-	-
Gilliamella sp. AM1	1970463	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.43828	34.6	-	NASL01	120	2232	2140	5/16/17	5/24/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603526	GCA_002141825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/825/GCA_002141825.1_ASM214182v1	-	AM1
Hoeflea olei	1480615	PRJNA306814	306814	Proteobacteria	Alphaproteobacteria	4.72361	65.6	-	LQZT01	50	4367	4233	8/11/16	4/13/17	Scaffold	UoH	SAMN04364335	GCA_001703635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/703/635/GCA_001703635.1_ASM170363v1	-	JC234
Pelagibacteraceae bacterium GOM-A3	1696175	PRJNA291283	291283	Proteobacteria	Alphaproteobacteria	0.828567	30.1	-	LHBZ01	153	952	863	8/11/16	8/11/16	Contig	Georgia Institute of Technology	SAMN03944294	GCA_001703985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/703/985/GCA_001703985.1_ASM170398v1	27487207	-
Pelagibacteraceae bacterium GOM-A4	1696176	PRJNA291283	291283	Proteobacteria	Alphaproteobacteria	0.511073	28.9	-	LHCA01	121	625	576	8/11/16	8/11/16	Contig	Georgia Institute of Technology	SAMN03944295	GCA_001703975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/703/975/GCA_001703975.1_ASM170397v1	27487207	-
Pelagibacteraceae bacterium GOM-A2	1696174	PRJNA291283	291283	Proteobacteria	Alphaproteobacteria	0.863523	29.8	-	LHBY01	167	1013	931	8/11/16	8/11/16	Contig	Georgia Institute of Technology	SAMN03944293	GCA_001703995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/703/995/GCA_001703995.1_ASM170399v1	27487207	-
Pelagibacteraceae bacterium GOM-A5	1696177	PRJNA291283	291283	Proteobacteria	Alphaproteobacteria	0.655485	28.7	-	LHCB01	113	756	695	8/11/16	8/11/16	Contig	Georgia Institute of Technology	SAMN03944296	GCA_001704055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/055/GCA_001704055.1_ASM170405v1	27487207	-
Pelagibacteraceae bacterium GOM-A1	1696173	PRJNA291283	291283	Proteobacteria	Alphaproteobacteria	1.33005	29.3	-	LHBX01	73	1437	1370	8/11/16	8/11/16	Contig	Georgia Institute of Technology	SAMN03944292	GCA_001704065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/065/GCA_001704065.1_ASM170406v1	27487207	-
Candidatus Tremblaya princeps	189385	PRJEB12068	316507	Proteobacteria	Betaproteobacteria	0.144042	58.9	chromosome I:LN998830.1	-	1	179	134	3/26/16	3/26/16	Complete Genome	UNIVERSITY OF SOUTH BOHEMIA	SAMEA3723484	GCA_900010175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/175/GCA_900010175.1_TPPLON	-	-
Kosakonia oryziphila	1005667	PRJEB15030	336290	Proteobacteria	Gammaproteobacteria	4.8149	52.8	-	FMBC01	129	4893	4398	8/3/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487790	GCA_900094795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/795/GCA_900094795.1_IMG-taxon_2616644846_annotated_assembly	-	REICA_142
Bifidobacterium commune	1505727	PRJEB15020	336300	Terrabacteria group	Actinobacteria	1.63366	54	-	FMBL01	4	1335	1241	8/4/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487796	GCA_900094885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/885/GCA_900094885.1_IMG-taxon_2616644832_annotated_assembly	-	R-52791
Weissella bombi	1505725	PRJEB15024	336296	Terrabacteria group	Firmicutes	1.8209	36.9	-	FMAO01	29	1812	1701	8/3/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487794	GCA_900094835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/835/GCA_900094835.1_IMG-taxon_2615840608_annotated_assembly	-	R-53094
Acinetobacter albensis	1673609	PRJEB15012	336308	Proteobacteria	Gammaproteobacteria	3.0459	38.4	-	FMBK01	30	2824	2706	8/3/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428935	GCA_900095025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/025/GCA_900095025.1_IMG-taxon_2671180230_annotated_assembly	-	ANC 4874
Haemophilus quentini	123834	PRJNA336373	336373	Proteobacteria	Gammaproteobacteria	2.15195	38.5	-	MCII02	78	2233	2019	8/10/16	4/13/17	Contig	Micropathology Ltd	SAMN05510460	GCA_001702075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/702/075/GCA_001702075.2_ASM170207v2	-	MP1
Desulfomicrobium orale DSM 12838	888061	PRJNA282954	282954	Proteobacteria	delta/epsilon subdivisions	2.78337	58.9	chromosome:NZ_CP014230.1/CP014230.1	-	1	2628	2451	2/9/16	4/16/17	Complete Genome	The Forsyth Institute	SAMN04435861	GCA_001553625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/625/GCA_001553625.1_ASM155362v1	-	DSM 12838
Macellibacteroides sp. HH-ZS	1857568	PRJNA324192	324192	FCB group	Bacteroidetes/Chlorobi group	4.08184	41.7	-	LZEK01	67	3364	3251	8/12/16	7/22/17	Contig	University of Huddersfield	SAMN05197888	GCA_001704385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/385/GCA_001704385.2_ASM170438v2	-	HH-ZS
Methylophilales bacterium LSUCC0135	1778481	PRJNA322310	322310	Proteobacteria	Betaproteobacteria	2.10688	55.2	-	MCAW01	25	2158	2050	8/13/16	6/20/17	Scaffold	Louisiana State University	SAMN05151611	GCA_001704575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/575/GCA_001704575.1_ASM170457v1	-	LSUCC0135
Streptomyces sparsogenes	67365	PRJNA328181	328181	Terrabacteria group	Actinobacteria	8.90795	72.4	-	MAXF01	276	7860	7247	8/14/16	3/13/17	Contig	Tianjin University of Commerce	SAMN05366068	GCA_001704635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/635/GCA_001704635.1_ASM170463v1	-	ATCC 25498
Bacillus wiedmannii	1890302	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.33798	35.2	-	LOBC01	104	5702	5399	3/9/16	4/5/17	Contig	Cornell University	SAMN03800026	GCA_001583695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/695/GCA_001583695.1_ASM158369v1	-	FSL W8-0169
Lachnospira sp. UBA2821	1946712	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.52556	35.7	-	DEGR01	83	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451169	GCA_002351535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/351/535/GCA_002351535.1_ASM235153v1	28894102	-
Flavonifractor sp. An92	1965666	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.49004	62.1	-	NFGZ01	60	3371	3191	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473771	GCA_002159175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/175/GCA_002159175.1_ASM215917v1	-	An92
Candidatus Jidaibacter acanthamoeba	86105	PRJNA263329	263329	Proteobacteria	Alphaproteobacteria	2.37065	33.7	-	JSWE01	249	2101	1935	1/6/15	4/17/17	Contig	University of Vienna	SAMN03099662	GCA_000815465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/465/GCA_000815465.1_UWC36	25908022	UWC36
Bifidobacterium breve DSM 20213 = JCM 1192	518634	PRJDB57	279561	Terrabacteria group	Actinobacteria	2.26941	58.9	chromosome:NZ_AP012324.1/AP012324.1	-	1	2039	1904	3/24/15	4/3/17	Complete Genome	"Graduate School of Frontier Sciences, University of Tokyo"	SAMD00061041	GCA_001025175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/175/GCA_001025175.1_ASM102517v1	-	JCM 1192
Xylella taiwanensis	1444770	PRJNA234286	234286	Proteobacteria	Gammaproteobacteria	2.73301	53	-	JDSQ01	85	2396	2143	2/21/14	4/9/17	Contig	USDA	SAMN02570451	GCA_000576405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/405/GCA_000576405.1_Wufong-1	24652975	PLS229
Enterovibrio pacificus	1080227	PRJNA322015	322015	Proteobacteria	Gammaproteobacteria	5.28813	45.5	-	LYBM01	163	4713	4392	8/18/16	4/13/17	Contig	"CIAD, A.C."	SAMN05007540	GCA_001707825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/825/GCA_001707825.1_ASM170782v1	-	CAIM 1920
Planctopirus sp. JC280	1841610	PRJNA319756	319756	PVC group	Planctomycetes	5.75024	53.8	-	LYDR01	164	4632	4493	8/18/16	4/13/17	Contig	JNTU Hyderabad	SAMN04904265	GCA_001707835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/835/GCA_001707835.1_ASM170783v1	-	JC280
Thermodesulfovibrio sp. N1	1871110	PRJNA327933	327933	Nitrospirae	Nitrospira	1.91522	33	-	MAVV01	116	2068	1905	8/18/16	4/13/17	Contig	"Institute of Bioengineering, Research Center of Biotechnology of RAS"	SAMN05362001	GCA_001707915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/915/GCA_001707915.1_ASM170791v1	-	N1
Candidatus Collierbacteria bacterium RIFOXYC2_FULL_43_15	1817730	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.08943	45	-	MFAP01	1	1211	1165	10/18/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04316228	GCA_001774675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/675/GCA_001774675.1_ASM177467v1	27774985	-
Candidatus Collierbacteria bacterium RIFOXYD2_FULL_45_13	1817733	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.08943	45	-	MFAS01	1	1211	1165	10/18/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04316225	GCA_001774685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/685/GCA_001774685.1_ASM177468v1	27774985	-
Candidatus Curtissbacteria bacterium RBG_13_40_7	1797706	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.774196	37.9	-	MFAU01	69	921	520	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314286	GCA_001774705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/705/GCA_001774705.1_ASM177470v1	27774985	-
Candidatus Curtissbacteria bacterium RBG_16_39_7	1797707	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.558268	37.7	-	MFAV01	48	699	443	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314044	GCA_001774735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/735/GCA_001774735.1_ASM177473v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_01_FULL_34_40	1797708	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.87969	39.9	-	MFAW01	62	938	850	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314836	GCA_001774755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/755/GCA_001774755.1_ASM177475v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_01_FULL_39_57	1797709	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.517249	38.3	-	MFAX01	45	580	527	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314928	GCA_001774765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/765/GCA_001774765.1_ASM177476v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_01_FULL_40_12	1797710	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.889109	39.8	-	MFAY01	67	1018	855	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314846	GCA_001774785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/785/GCA_001774785.1_ASM177478v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_01_FULL_41_13	1797745	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.686305	40.3	-	MFBA01	60	845	693	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314849	GCA_001774815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/815/GCA_001774815.1_ASM177481v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_01_FULL_41_44	1797712	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.05641	41.1	-	MFBB01	43	1142	1066	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314850	GCA_001774835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/835/GCA_001774835.1_ASM177483v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_02_FULL_40_17	1797715	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.6	39.4	-	MFBE01	32	658	595	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315534	GCA_001774845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/845/GCA_001774845.1_ASM177484v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_02_FULL_42_15	1797716	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.769186	41.4	-	MFBF01	69	920	774	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315460	GCA_001774865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/865/GCA_001774865.1_ASM177486v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_12_41_11	1797718	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.694068	40.9	-	MFBH01	59	838	722	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313766	GCA_001774895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/895/GCA_001774895.1_ASM177489v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_12_FULL_38_37	1797719	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.496058	38.1	-	MFBI01	38	559	520	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315564	GCA_001774915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/915/GCA_001774915.1_ASM177491v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_12_FULL_41_13	1797721	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.828692	40.7	-	MFBK01	51	904	795	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315567	GCA_001774935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/935/GCA_001774935.1_ASM177493v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_12_FULL_41_17	1797722	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.836061	40.1	-	MFBL01	58	948	850	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315733	GCA_001774945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/945/GCA_001774945.1_ASM177494v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_12_FULL_42_33	1797723	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.989451	41.6	-	MFBM01	37	1064	990	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315623	GCA_001774975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/975/GCA_001774975.1_ASM177497v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPLOWO2_01_FULL_38_11b	1797725	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.53595	38	-	MFBO01	41	613	507	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315202	GCA_001774995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/995/GCA_001774995.1_ASM177499v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPLOWO2_01_FULL_41_28	1797728	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.713644	40.9	-	MFBR01	52	761	676	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315305	GCA_001775005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/005/GCA_001775005.1_ASM177500v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPLOWO2_01_FULL_42_26	1797729	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.859434	41.9	-	MFBS01	42	993	899	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315213	GCA_001775025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/025/GCA_001775025.1_ASM177502v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPLOWO2_02_41_11	1797731	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.07852	39.9	-	MFBU01	25	1161	1070	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313791	GCA_001775055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/055/GCA_001775055.1_ASM177505v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPLOWO2_02_FULL_42_37	1797734	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.986204	41.7	-	MFBX01	36	1070	997	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315975	GCA_001775075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/075/GCA_001775075.1_ASM177507v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPLOWO2_12_FULL_38_9	1797735	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.943957	38.3	-	MFBY01	62	1105	978	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315802	GCA_001775085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/085/GCA_001775085.1_ASM177508v1	27774985	-
Candidatus Curtissbacteria bacterium RIFOXYA1_FULL_41_14	1797737	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.14828	40.2	-	MFCA01	30	1216	1132	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314317	GCA_001775095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/095/GCA_001775095.1_ASM177509v1	27774985	-
Candidatus Curtissbacteria bacterium RIFOXYB1_FULL_41_59	1797738	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.953216	40	-	MFCB01	55	1000	914	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314483	GCA_001775135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/135/GCA_001775135.1_ASM177513v1	27774985	-
Candidatus Curtissbacteria bacterium RIFOXYB12_FULL_40_6	1797739	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.799405	39.5	-	MFCC01	136	885	663	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316177	GCA_001775155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/155/GCA_001775155.1_ASM177515v1	27774985	-
Candidatus Curtissbacteria bacterium RIFOXYB2_FULL_41_10	1797740	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.07854	40	-	MFCD01	36	1149	1053	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314426	GCA_001775165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/165/GCA_001775165.1_ASM177516v1	27774985	-
Candidatus Curtissbacteria bacterium RIFOXYC1_FULL_41_36	1797741	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.870398	40.9	-	MFCE01	47	940	857	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314530	GCA_001775175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/175/GCA_001775175.1_ASM177517v1	27774985	-
Candidatus Curtissbacteria bacterium RIFOXYC12_FULL_41_11	1797742	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.824053	40.7	-	MFCF01	50	913	797	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314616	GCA_001775215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/215/GCA_001775215.1_ASM177521v1	27774985	-
Candidatus Curtissbacteria bacterium RIFOXYC2_FULL_41_11	1797743	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.10542	40.1	-	MFCG01	30	1191	1054	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314591	GCA_001775235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/235/GCA_001775235.1_ASM177523v1	27774985	-
Candidatus Dadabacteria bacterium RBG_19FT_COMBO_40_33	1797755	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.15359	40.2	-	MFCI01	127	1145	1022	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313672	GCA_001775245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/245/GCA_001775245.1_ASM177524v1	27774985	-
Candidatus Dadabacteria bacterium RIFCSPHIGHO2_12_FULL_53_21	1797756	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	2.19613	52.5	-	MFCJ01	159	2113	1891	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316130	GCA_001775255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/255/GCA_001775255.1_ASM177525v1	27774985	-
Candidatus Daviesbacteria bacterium GWA1_38_6	1797757	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.553044	36.8	-	MFCK01	54	708	528	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314232	GCA_001775285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/285/GCA_001775285.1_ASM177528v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_01_FULL_37_27	1797759	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.838804	36.6	-	MFCM01	41	955	881	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314922	GCA_001775315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/315/GCA_001775315.1_ASM177531v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_01_FULL_36_37	1797758	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.795914	35.4	-	MFCL01	15	847	808	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315011	GCA_001775325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/325/GCA_001775325.1_ASM177532v1	27774985	-
candidate division Zixibacteria bacterium RBG_16_43_9	1802784	PRJNA288027	288027	FCB group	candidate division Zixibacteria	1.95127	42.3	-	MEWM01	160	1927	1381	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313728	GCA_001775355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/355/GCA_001775355.1_ASM177535v1	27774985	-
candidate division Zixibacteria bacterium RBG_16_48_11	1802785	PRJNA288027	288027	FCB group	candidate division Zixibacteria	1.88986	46	-	MEWN01	225	1989	1251	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314263	GCA_001775365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/365/GCA_001775365.1_ASM177536v1	27774985	-
candidate division Zixibacteria bacterium RBG_19FT_COMBO_42_43	1802788	PRJNA288027	288027	FCB group	candidate division Zixibacteria	1.99279	41.9	-	MEWQ01	86	1871	1736	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313694	GCA_001775405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/405/GCA_001775405.1_ASM177540v1	27774985	-
candidate division Zixibacteria bacterium RBG_16_53_22	1802787	PRJNA288027	288027	FCB group	candidate division Zixibacteria	3.85885	53.2	-	MEWP01	169	3537	3317	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313746	GCA_001775395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/395/GCA_001775395.1_ASM177539v1	27774985	-
Candidatus Adlerbacteria bacterium RIFCSPHIGHO2_01_FULL_54_23	1797239	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.517848	53.9	-	MEWT01	22	592	528	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315005	GCA_001775435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/435/GCA_001775435.1_ASM177543v1	27774985	-
Candidatus Adlerbacteria bacterium RIFCSPHIGHO2_02_FULL_54_18	1797241	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.500731	54.2	-	MEWV01	25	589	519	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315523	GCA_001775445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/445/GCA_001775445.1_ASM177544v1	27774985	-
Candidatus Adlerbacteria bacterium RIFCSPHIGHO2_12_FULL_53_18	1797242	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.539999	52.9	-	MEWW01	18	644	575	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315743	GCA_001775475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/475/GCA_001775475.1_ASM177547v1	27774985	-
Candidatus Adlerbacteria bacterium RIFCSPLOWO2_01_FULL_51_16	1797243	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.608701	51.3	-	MEWX01	30	704	615	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315096	GCA_001775485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/485/GCA_001775485.1_ASM177548v1	27774985	-
Candidatus Adlerbacteria bacterium RIFOXYD1_FULL_48_8	1797248	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.478434	46.9	-	MEXC01	48	595	436	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314743	GCA_001775525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/525/GCA_001775525.1_ASM177552v1	27774985	-
Candidatus Adlerbacteria bacterium RIFOXYB1_FULL_48_10	1797246	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.598251	47.4	-	MEXA01	28	709	575	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314510	GCA_001775515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/515/GCA_001775515.1_ASM177551v1	27774985	-
Candidatus Amesbacteria bacterium RBG_19FT_COMBO_48_16	1797250	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.911921	47.7	-	MEXE01	56	1042	930	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313669	GCA_001775555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/555/GCA_001775555.1_ASM177555v1	27774985	-
Candidatus Amesbacteria bacterium RIFCSPHIGHO2_01_FULL_47_34	1797251	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.848883	47.5	-	MEXF01	61	978	894	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314854	GCA_001775565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/565/GCA_001775565.1_ASM177556v1	27774985	-
Candidatus Amesbacteria bacterium RIFCSPHIGHO2_01_FULL_48_32b	1797253	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.941917	48	-	MEXH01	33	1059	979	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315029	GCA_001775605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/605/GCA_001775605.1_ASM177560v1	27774985	-
Candidatus Amesbacteria bacterium RIFCSPHIGHO2_02_FULL_47_9	1797255	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.598501	46.5	-	MEXJ01	55	719	589	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315538	GCA_001775595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/595/GCA_001775595.1_ASM177559v1	27774985	-
Candidatus Amesbacteria bacterium RIFCSPHIGHO2_02_FULL_48_21	1797256	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.858429	48	-	MEXK01	50	988	897	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315387	GCA_001775635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/635/GCA_001775635.1_ASM177563v1	27774985	-
Candidatus Amesbacteria bacterium RIFOXYB1_FULL_47_12	1797264	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.823887	47.4	-	MEXS01	35	971	825	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314475	GCA_001775645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/645/GCA_001775645.1_ASM177564v1	27774985	-
Candidatus Amesbacteria bacterium RIFOXYB1_FULL_47_9	1797266	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.756708	45.9	-	MEXU01	74	974	667	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314516	GCA_001775675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/675/GCA_001775675.1_ASM177567v1	27774985	-
Candidatus Aminicenantes bacterium RBG_13_59_9	1797268	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	3.30968	56.9	-	MEXW01	268	3161	1893	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313990	GCA_001775685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/685/GCA_001775685.1_ASM177568v1	27774985	-
Candidatus Aminicenantes bacterium RBG_13_62_12	1797269	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	2.04228	60.6	-	MEXX01	99	1958	1473	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314007	GCA_001775695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/695/GCA_001775695.1_ASM177569v1	27774985	-
Candidatus Aminicenantes bacterium RBG_16_66_30	1797274	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	2.07547	65.7	-	MEYC01	130	1910	1687	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313741	GCA_001775715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/715/GCA_001775715.1_ASM177571v1	27774985	-
Candidatus Aminicenantes bacterium RBG_19FT_COMBO_65_30	1797277	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	2.45344	63.8	-	MEYF01	136	2176	1940	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313678	GCA_001775755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/755/GCA_001775755.1_ASM177575v1	27774985	-
Candidatus Azambacteria bacterium RIFCSPHIGHO2_01_FULL_40_24	1797301	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.58055	39.1	-	MEYK01	39	642	570	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314972	GCA_001775785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/785/GCA_001775785.1_ASM177578v1	27774985	-
Candidatus Atribacteria bacterium RBG_16_35_8	1797290	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.93285	34	-	MEYG01	204	2025	1268	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313715	GCA_001775775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/775/GCA_001775775.1_ASM177577v1	27774985	-
Candidatus Azambacteria bacterium RIFCSPHIGHO2_02_46_12	1797295	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.690392	46	-	MEYN01	53	751	662	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313781	GCA_001775795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/795/GCA_001775795.1_ASM177579v1	27774985	-
Candidatus Azambacteria bacterium RIFCSPHIGHO2_02_FULL_52_12	1797296	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.92314	51.2	-	MEYP01	28	1022	885	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315444	GCA_001775835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/835/GCA_001775835.1_ASM177583v1	27774985	-
Candidatus Azambacteria bacterium RIFCSPLOWO2_01_FULL_37_9	1797297	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.502302	36.5	-	MEYQ01	53	569	385	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315060	GCA_001775855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/855/GCA_001775855.1_ASM177585v1	27774985	-
Candidatus Azambacteria bacterium RIFCSPLOWO2_02_FULL_42_10	1797305	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.467106	41.7	-	MEYU01	40	557	407	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316070	GCA_001775875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/875/GCA_001775875.1_ASM177587v1	27774985	-
Candidatus Azambacteria bacterium RIFOXYA1_FULL_42_37	1797307	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.608915	42.3	-	MEYX01	15	685	623	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314314	GCA_001775885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/885/GCA_001775885.1_ASM177588v1	27774985	-
Candidatus Azambacteria bacterium RIFOXYB1_FULL_40_33	1797308	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.585603	42.3	-	MEYY01	1	659	604	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316217	GCA_001775915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/915/GCA_001775915.1_ASM177591v1	27774985	-
Candidatus Azambacteria bacterium RIFOXYD1_FULL_44_10	1797312	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.652051	43.6	-	MEZC01	48	734	556	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314761	GCA_001775935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/935/GCA_001775935.1_ASM177593v1	27774985	-
Candidatus Bathyarchaeota archaeon RBG_13_38_9	1797377	PRJNA288027	288027	TACK group	Candidatus Bathyarchaeota	1.72411	36.8	-	MEZD01	48	1844	1550	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316269	GCA_001775955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/955/GCA_001775955.1_ASM177595v1	27774985	-
Candidatus Bathyarchaeota archaeon RBG_13_60_20	1797380	PRJNA288027	288027	TACK group	Candidatus Bathyarchaeota	1.21569	60.8	-	MEZG01	86	1395	1254	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316270	GCA_001775965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/965/GCA_001775965.1_ASM177596v1	27774985	-
Candidatus Bathyarchaeota archaeon RBG_16_48_13	1797381	PRJNA288027	288027	TACK group	Candidatus Bathyarchaeota	0.848615	48	-	MEZH01	16	942	867	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316259	GCA_001775995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/775/995/GCA_001775995.1_ASM177599v1	27774985	-
Candidatus Bathyarchaeota archaeon RBG_16_57_9	1797382	PRJNA288027	288027	TACK group	Candidatus Bathyarchaeota	1.52352	58.3	-	MEZI01	73	1766	1359	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316258	GCA_001776015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/015/GCA_001776015.1_ASM177601v1	27774985	-
Candidatus Beckwithbacteria bacterium RBG_13_35_6	1797456	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.407413	32.7	-	MEZJ01	52	495	232	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316166	GCA_001776035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/035/GCA_001776035.1_ASM177603v1	27774985	-
Candidatus Beckwithbacteria bacterium RBG_13_42_9	1797457	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.17304	40.7	-	MEZK01	34	1286	981	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314281	GCA_001776045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/045/GCA_001776045.1_ASM177604v1	27774985	-
Candidatus Beckwithbacteria bacterium RIFCSPHIGHO2_02_FULL_49_13	1797459	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.0195	49	-	MEZM01	23	1152	1048	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315539	GCA_001776075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/075/GCA_001776075.1_ASM177607v1	27774985	-
Candidatus Beckwithbacteria bacterium RIFCSPHIGHO2_12_FULL_47_17	1797460	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.53708	46.9	-	MEZN01	48	669	587	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315625	GCA_001776095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/095/GCA_001776095.1_ASM177609v1	27774985	-
Candidatus Beckwithbacteria bacterium RIFCSPLOWO2_02_FULL_47_23	1797463	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.672036	47.2	-	MEZQ01	68	818	725	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316045	GCA_001776115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/115/GCA_001776115.1_ASM177611v1	27774985	-
Candidatus Berkelbacteria bacterium RIFCSPHIGHO2_01_FULL_50_36	1797468	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.709408	50	-	MEZU01	14	713	670	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314960	GCA_001776125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/125/GCA_001776125.1_ASM177612v1	27774985	-
Candidatus Berkelbacteria bacterium RIFCSPHIGHO2_12_FULL_36_9	1797469	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.676094	35.3	-	MEZV01	60	741	604	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315660	GCA_001776145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/145/GCA_001776145.1_ASM177614v1	27774985	-
Candidatus Berkelbacteria bacterium RIFCSPHIGHO2_12_FULL_50_11	1797470	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.812613	49.5	-	MEZW01	28	886	756	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315691	GCA_001776175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/175/GCA_001776175.1_ASM177617v1	27774985	-
Candidatus Berkelbacteria bacterium RIFOXYA2_FULL_43_10	1797472	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.960706	43.3	-	MEZY01	58	964	840	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314336	GCA_001776195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/195/GCA_001776195.1_ASM177619v1	27774985	-
Candidatus Campbellbacteria bacterium RIFCSPHIGHO2_12_FULL_35_10	1797578	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.538984	34.6	-	MFAA01	49	617	504	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315641	GCA_001776215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/215/GCA_001776215.1_ASM177621v1	27774985	-
Candidatus Collierbacteria bacterium RIFCSPHIGHO2_02_FULL_49_10	1817723	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.75278	49.1	-	MFAH01	75	903	673	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315462	GCA_001776225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/225/GCA_001776225.1_ASM177622v1	27774985	-
Candidatus Collierbacteria bacterium RIFOXYA2_FULL_46_20	1817727	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.08943	45	-	MFAL01	1	1211	1165	10/18/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04316232	GCA_001776255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/255/GCA_001776255.1_ASM177625v1	27774985	-
Candidatus Collierbacteria bacterium RIFOXYD1_FULL_40_9	1817731	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.81016	39.7	-	MFAQ01	46	1001	828	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314725	GCA_001776275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/275/GCA_001776275.1_ASM177627v1	27774985	-
Candidatus Collierbacteria bacterium RIFOXYD1_FULL_46_26	1817732	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.671113	46.7	-	MFAR01	43	737	647	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314771	GCA_001776285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/285/GCA_001776285.1_ASM177628v1	27774985	-
Candidatus Curtissbacteria bacterium RBG_13_35_7	1797705	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.80356	33.5	-	MFAT01	75	913	538	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314285	GCA_001776315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/315/GCA_001776315.1_ASM177631v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_01_FULL_41_11	1797711	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.83086	41.2	-	MFAZ01	46	965	849	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315023	GCA_001776335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/335/GCA_001776335.1_ASM177633v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_02_39_8	1797713	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.620534	38.3	-	MFBC01	69	707	598	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314075	GCA_001776345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/345/GCA_001776345.1_ASM177634v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_02_FULL_40_16b	1797714	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.896653	39.2	-	MFBD01	48	1035	947	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315457	GCA_001776375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/375/GCA_001776375.1_ASM177637v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_02_FULL_42_58	1797717	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.933166	41.7	-	MFBG01	40	1009	934	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315386	GCA_001776395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/395/GCA_001776395.1_ASM177639v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_12_FULL_38_9b	1797720	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.716344	37.2	-	MFBJ01	73	844	671	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315654	GCA_001776415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/415/GCA_001776415.1_ASM177641v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPLOWO2_01_FULL_37_9	1797724	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.728096	36.4	-	MFBN01	58	882	715	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315201	GCA_001776425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/425/GCA_001776425.1_ASM177642v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPLOWO2_01_FULL_39_62	1797726	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.498131	38.6	-	MFBP01	44	578	520	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315207	GCA_001776455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/455/GCA_001776455.1_ASM177645v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPLOWO2_01_FULL_41_18	1797727	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.634342	40.4	-	MFBQ01	47	739	645	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315304	GCA_001776475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/475/GCA_001776475.1_ASM177647v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPLOWO2_01_FULL_42_50	1797730	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.05377	41.3	-	MFBT01	42	1138	1056	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315307	GCA_001776495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/495/GCA_001776495.1_ASM177649v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPLOWO2_02_FULL_40_11	1797732	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.938315	38.9	-	MFBV01	45	1082	955	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316105	GCA_001776505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/505/GCA_001776505.1_ASM177650v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPLOWO2_02_FULL_40_13b	1797733	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.797094	39.5	-	MFBW01	61	908	772	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316041	GCA_001776535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/535/GCA_001776535.1_ASM177653v1	27774985	-
Candidatus Curtissbacteria bacterium RIFCSPLOWO2_12_FULL_41_16	1797736	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.995255	41.6	-	MFBZ01	30	1071	998	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315804	GCA_001776545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/545/GCA_001776545.1_ASM177654v1	27774985	-
Candidatus Curtissbacteria bacterium RIFOXYD1_FULL_41_36	1797744	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.07924	40.1	-	MFCH01	38	1139	1058	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314768	GCA_001776575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/575/GCA_001776575.1_ASM177657v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_01_FULL_38_8	1797760	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.822791	37.3	-	MFCN01	75	960	785	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314841	GCA_001776585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/585/GCA_001776585.1_ASM177658v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_01_FULL_38_8b	1797761	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.531703	37.2	-	MFCO01	60	620	507	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314925	GCA_001776605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/605/GCA_001776605.1_ASM177660v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_01_FULL_40_11	1797762	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.964213	40.1	-	MFCP01	42	1086	961	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315020	GCA_001776635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/635/GCA_001776635.1_ASM177663v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_01_FULL_40_24	1797763	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.27429	38.9	-	MFCQ01	19	1354	1284	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314931	GCA_001776655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/655/GCA_001776655.1_ASM177665v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_01_FULL_43_17	1797766	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.735849	43.3	-	MFCT01	24	844	777	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315027	GCA_001776675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/675/GCA_001776675.1_ASM177667v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_02_FULL_39_8	1797772	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.635368	38.6	-	MFCZ01	52	759	620	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315532	GCA_001776685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/685/GCA_001776685.1_ASM177668v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_02_FULL_40_16	1797773	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.31963	39.1	-	MFDA01	27	1408	1329	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315382	GCA_001776705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/705/GCA_001776705.1_ASM177670v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_02_FULL_41_10	1797774	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.932998	40.3	-	MFDB01	28	981	890	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315536	GCA_001776735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/735/GCA_001776735.1_ASM177673v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_02_FULL_41_14	1797775	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.819866	39.5	-	MFDC01	26	915	845	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315385	GCA_001776755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/755/GCA_001776755.1_ASM177675v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_02_FULL_43_12	1797776	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.12462	42.2	-	MFDD01	15	1183	1107	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315478	GCA_001776775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/775/GCA_001776775.1_ASM177677v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_12_FULL_37_16	1797778	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.01797	36.8	-	MFDF01	27	1159	1086	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315618	GCA_001776785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/785/GCA_001776785.1_ASM177678v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_12_FULL_38_25	1797779	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.860174	38.4	-	MFDG01	47	1040	971	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315619	GCA_001776815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/815/GCA_001776815.1_ASM177681v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_12_FULL_43_11	1797780	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.959659	42.2	-	MFDH01	38	1070	946	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315597	GCA_001776835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/835/GCA_001776835.1_ASM177683v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPLOWO2_01_FULL_37_10	1797783	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.969723	36.6	-	MFDK01	40	1112	999	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315292	GCA_001776865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/865/GCA_001776865.1_ASM177686v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPLOWO2_01_FULL_36_8	1797782	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.634417	35.1	-	MFDJ01	70	791	575	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315198	GCA_001776855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/855/GCA_001776855.1_ASM177685v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPLOWO2_01_FULL_38_10	1797784	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.864431	38	-	MFDL01	72	1064	858	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315295	GCA_001776895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/895/GCA_001776895.1_ASM177689v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPLOWO2_01_FULL_39_12	1797785	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.00402	38.6	-	MFDM01	34	1115	1023	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315298	GCA_001776905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/905/GCA_001776905.1_ASM177690v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPLOWO2_01_FULL_39_23	1797786	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.27868	38.9	-	MFDN01	15	1358	1296	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315206	GCA_001776935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/935/GCA_001776935.1_ASM177693v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_01_FULL_41_23	1797764	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.849291	41	-	MFCR01	11	907	859	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315024	GCA_001776945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/945/GCA_001776945.1_ASM177694v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_01_FULL_41_45	1797765	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.685375	40.3	-	MFCS01	34	791	712	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314933	GCA_001776975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/975/GCA_001776975.1_ASM177697v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_01_FULL_44_29	1797767	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.17523	42.4	-	MFCU01	16	1219	1154	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314784	GCA_001776985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/776/985/GCA_001776985.1_ASM177698v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_02_FULL_37_9	1797769	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.667968	37	-	MFCW01	38	786	675	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315452	GCA_001777025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/025/GCA_001777025.1_ASM177702v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_02_FULL_36_13	1797768	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.963675	35.6	-	MFCV01	49	1114	1013	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315412	GCA_001777015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/015/GCA_001777015.1_ASM177701v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_02_FULL_39_12	1797770	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.830245	38.7	-	MFCX01	38	925	848	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315379	GCA_001777055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/055/GCA_001777055.1_ASM177705v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_02_FULL_39_41	1797771	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.797427	38.8	-	MFCY01	50	958	885	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315455	GCA_001777065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/065/GCA_001777065.1_ASM177706v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_12_FULL_37_11	1797777	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.98777	36.6	-	MFDE01	48	1129	1018	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315652	GCA_001777095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/095/GCA_001777095.1_ASM177709v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_12_FULL_47_45	1797781	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.06295	42	-	MFDI01	35	1159	1020	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315638	GCA_001777105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/105/GCA_001777105.1_ASM177710v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPLOWO2_01_FULL_40_24	1797787	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.744705	39.5	-	MFDO01	24	830	773	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315302	GCA_001777345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/345/GCA_001777345.1_ASM177734v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPLOWO2_01_FULL_40_27	1797788	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.594114	39.7	-	MFDP01	15	665	620	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315117	GCA_001777335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/335/GCA_001777335.1_ASM177733v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPLOWO2_01_FULL_41_32	1797789	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.637627	40.9	-	MFDQ01	6	701	666	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315120	GCA_001777375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/375/GCA_001777375.1_ASM177737v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPLOWO2_01_FULL_43_15	1797790	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.13326	42.3	-	MFDR01	10	1199	1132	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315308	GCA_001777395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/395/GCA_001777395.1_ASM177739v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPLOWO2_02_FULL_36_8	1797793	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.460279	34.6	-	MFDU01	51	548	395	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316101	GCA_001777415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/415/GCA_001777415.1_ASM177741v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPLOWO2_02_FULL_38_18	1797795	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.0746	38.2	-	MFDW01	44	1231	1162	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315969	GCA_001777435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/435/GCA_001777435.1_ASM177743v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPLOWO2_02_FULL_41_8	1797798	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.989227	40.7	-	MFDZ01	70	1125	913	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316107	GCA_001777455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/455/GCA_001777455.1_ASM177745v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPLOWO2_01_FULL_43_38	1797791	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.850234	42.3	-	MFDS01	34	939	871	10/19/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04315167	GCA_001777465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/465/GCA_001777465.1_ASM177746v1	27774985	-
Candidatus Daviesbacteria bacterium RIFOXYD1_FULL_41_10	1797801	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.828232	40.7	-	MFEC01	41	997	834	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314770	GCA_001777495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/495/GCA_001777495.1_ASM177749v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_48_18	1817819	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.919187	47.8	-	MFEF01	33	998	933	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316193	GCA_001777515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/515/GCA_001777515.1_ASM177751v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_43_23	1817822	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.590359	43.2	-	MFEI01	44	644	574	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314979	GCA_001777525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/525/GCA_001777525.1_ASM177752v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_43_10	1817818	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.852443	41.9	-	MFEE01	19	958	883	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316195	GCA_001777545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/545/GCA_001777545.1_ASM177754v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_46_24	1817825	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.847051	48.3	-	MFEL01	18	955	879	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314873	GCA_001777575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/575/GCA_001777575.1_ASM177757v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_50_11	1817828	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.880494	50	-	MFEO01	37	940	814	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314875	GCA_001777585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/585/GCA_001777585.1_ASM177758v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_48_180	1817826	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.839729	47.8	-	MFEM01	49	934	855	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314821	GCA_001777615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/615/GCA_001777615.1_ASM177761v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_50_67	1817829	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.824011	49.1	-	MFEP01	38	917	839	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314913	GCA_001777635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/635/GCA_001777635.1_ASM177763v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_02_FULL_42_25	1817830	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.849155	42	-	MFEQ01	8	949	889	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315402	GCA_001777665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/665/GCA_001777665.1_ASM177766v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_02_FULL_43_13b	1817831	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.776513	43.4	-	MFER01	17	892	810	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315348	GCA_001777655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/655/GCA_001777655.1_ASM177765v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_02_FULL_48_21	1817833	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.880149	47.8	-	MFET01	31	959	897	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315438	GCA_001777695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/695/GCA_001777695.1_ASM177769v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_02_FULL_49_24	1817834	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.862069	48.9	-	MFEU01	17	963	904	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315330	GCA_001777705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/705/GCA_001777705.1_ASM177770v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_12_FULL_47_25	1817836	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.859871	47.7	-	MFEW01	29	935	880	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315732	GCA_001777735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/735/GCA_001777735.1_ASM177773v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPLOWO2_01_41_7	1817839	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.493522	41.1	-	MFEZ01	53	601	516	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316196	GCA_001777745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/745/GCA_001777745.1_ASM177774v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPLOWO2_02_FULL_49_13	1817847	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.908289	48.8	-	MFFH01	8	1012	940	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316095	GCA_001777785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/785/GCA_001777785.1_ASM177778v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPLOWO2_02_FULL_42_9	1817844	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.797185	41.8	-	MFFE01	40	921	782	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315995	GCA_001777775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/775/GCA_001777775.1_ASM177777v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPLOWO2_01_FULL_44_21	1817841	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.809049	43.7	-	MFFB01	18	941	860	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315263	GCA_001777825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/825/GCA_001777825.1_ASM177782v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPLOWO2_02_FULL_48_8	1817846	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.653542	47.8	-	MFFG01	52	796	610	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315960	GCA_001777815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/815/GCA_001777815.1_ASM177781v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPLOWO2_12_FULL_49_8	1821776	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.757774	48.8	-	MFFK01	53	873	762	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315902	GCA_001777855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/855/GCA_001777855.1_ASM177785v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPLOWO2_12_FULL_47_12	1817849	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.913292	47.6	-	MFFJ01	31	1001	929	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315795	GCA_001777875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/875/GCA_001777875.1_ASM177787v1	27774985	-
Candidatus Edwardsbacteria bacterium GWF2_54_11	1817851	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	2.76089	53.9	-	MFFM01	52	2507	2330	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314145	GCA_001777895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/895/GCA_001777895.1_ASM177789v1	27774985	-
Candidatus Edwardsbacteria bacterium RifOxyA12_full_54_48	1817852	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	2.73554	54.2	-	MFFN01	9	2432	2366	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314394	GCA_001777915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/915/GCA_001777915.1_ASM177791v1	27774985	-
Candidatus Edwardsbacteria bacterium GWE2_54_12	1817850	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	2.76205	54.2	-	MFFL01	8	2466	2368	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316203	GCA_001777935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/935/GCA_001777935.1_ASM177793v1	27774985	-
Candidatus Edwardsbacteria bacterium RIFOXYD12_FULL_50_11	1817855	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	2.78012	54	-	MFFP01	30	2503	2366	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314630	GCA_001777945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/945/GCA_001777945.1_ASM177794v1	27774985	-
Candidatus Eisenbacteria bacterium RBG_19FT_COMBO_70_11	1817857	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	2.95824	68.7	-	MFFR01	244	2788	1808	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313684	GCA_001777975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/975/GCA_001777975.1_ASM177797v1	27774985	-
Candidatus Falkowbacteria bacterium RIFCSPHIGHO2_02_FULL_45_15	1797987	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.847374	44.5	-	MFFU01	63	868	736	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315507	GCA_001778005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/005/GCA_001778005.1_ASM177800v1	27774985	-
Candidatus Falkowbacteria bacterium RIFCSPLOWO2_02_FULL_45_15	1797988	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.866073	44.8	-	MFFV01	55	888	759	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316023	GCA_001777995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/995/GCA_001777995.1_ASM177799v1	27774985	-
Candidatus Falkowbacteria bacterium RIFCSPLOWO2_02_FULL_45_21	1797989	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.779047	44.1	-	MFFW01	59	703	632	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315954	GCA_001778015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/015/GCA_001778015.1_ASM177801v1	27774985	-
Candidatus Falkowbacteria bacterium RIFCSPLOWO2_12_FULL_45_13	1797991	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.938303	44.4	-	MFFY01	61	849	765	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315897	GCA_001778055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/055/GCA_001778055.1_ASM177805v1	27774985	-
Candidatus Falkowbacteria bacterium RIFOXYA2_FULL_47_9	1797995	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.927938	46.6	-	MFGC01	52	978	809	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314363	GCA_001778085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/085/GCA_001778085.1_ASM177808v1	27774985	-
Candidatus Falkowbacteria bacterium RIFOXYA2_FULL_35_8	1797992	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.9865	35	-	MFFZ01	60	1021	885	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314344	GCA_001778075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/075/GCA_001778075.1_ASM177807v1	27774985	-
Candidatus Falkowbacteria bacterium RIFOXYA2_FULL_38_12	1797993	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.914259	38.3	-	MFGA01	23	906	829	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314378	GCA_001778095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/095/GCA_001778095.1_ASM177809v1	27774985	-
Candidatus Falkowbacteria bacterium RIFOXYB2_FULL_34_18	1797996	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.49722	34	-	MFGD01	38	1432	1373	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314452	GCA_001778135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/135/GCA_001778135.1_ASM177813v1	27774985	-
Candidatus Falkowbacteria bacterium RIFOXYB2_FULL_35_7	1797997	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.885981	35	-	MFGE01	68	955	817	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314421	GCA_001778155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/155/GCA_001778155.1_ASM177815v1	27774985	-
Candidatus Falkowbacteria bacterium RIFOXYB2_FULL_47_14	1797999	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.6703	46.4	-	MFGG01	35	1584	1478	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314424	GCA_001778165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/165/GCA_001778165.1_ASM177816v1	27774985	-
Candidatus Falkowbacteria bacterium RIFOXYB2_FULL_38_15	1797998	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.872364	38.3	-	MFGF01	30	865	790	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314437	GCA_001778195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/195/GCA_001778195.1_ASM177819v1	27774985	-
Candidatus Falkowbacteria bacterium RIFOXYC2_FULL_34_220	1798001	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.58791	34.1	-	MFGI01	42	1483	1421	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314587	GCA_001778205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/205/GCA_001778205.1_ASM177820v1	27774985	-
Candidatus Falkowbacteria bacterium RIFOXYC2_FULL_36_12	1798002	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.08826	35.2	-	MFGJ01	8	1114	1055	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314599	GCA_001778235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/235/GCA_001778235.1_ASM177823v1	27774985	-
Candidatus Falkowbacteria bacterium RIFOXYC2_FULL_46_15	1798003	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.69938	46.2	-	MFGK01	45	1625	1469	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314589	GCA_001778255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/255/GCA_001778255.1_ASM177825v1	27774985	-
Candidatus Falkowbacteria bacterium RIFOXYC2_FULL_48_21	1798005	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.02079	47.6	-	MFGM01	86	1090	970	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314603	GCA_001778275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/275/GCA_001778275.1_ASM177827v1	27774985	-
Candidatus Falkowbacteria bacterium RIFOXYC2_FULL_47_12	1798004	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.93261	46.8	-	MFGL01	41	973	807	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314598	GCA_001778285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/285/GCA_001778285.1_ASM177828v1	27774985	-
Candidatus Firestonebacteria bacterium GWA2_43_8	1817858	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.69517	41.3	-	MFGR01	188	1768	1083	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314165	GCA_001778315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/315/GCA_001778315.1_ASM177831v1	27774985	-
Candidatus Falkowbacteria bacterium RIFOXYD2_FULL_34_120	1798007	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.62901	34.3	-	MFGO01	40	1506	1444	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314652	GCA_001778325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/325/GCA_001778325.1_ASM177832v1	27774985	-
Candidatus Firestonebacteria bacterium RIFOXYA2_FULL_40_8	1817859	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	2.80511	40.2	-	MFGS01	200	2655	2184	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314352	GCA_001778355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/355/GCA_001778355.1_ASM177835v1	27774985	-
Candidatus Firestonebacteria bacterium RIFOXYD2_FULL_39_29	1817862	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	3.00384	39.4	-	MFGV01	93	2548	2463	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314657	GCA_001778375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/375/GCA_001778375.1_ASM177837v1	27774985	-
Candidatus Giovannonibacteria bacterium GWA2_45_15	1798320	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.873312	44.5	-	MFGY01	27	1015	936	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314241	GCA_001778395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/395/GCA_001778395.1_ASM177839v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_45_12	1798321	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.844183	44.5	-	MFGZ01	37	986	897	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313761	GCA_001778415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/415/GCA_001778415.1_ASM177841v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_FULL_43_140	1798323	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.592788	43	-	MFHB01	26	718	655	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314805	GCA_001778435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/435/GCA_001778435.1_ASM177843v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_FULL_45_23	1798325	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.837139	44.4	-	MFHD01	26	945	866	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314987	GCA_001778465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/465/GCA_001778465.1_ASM177846v1	27774985	-
Candidatus Fraserbacteria bacterium RBG_16_55_9	1817864	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.95506	54.6	-	MFGX01	133	2162	1544	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314042	GCA_001778455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/455/GCA_001778455.1_ASM177845v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_FULL_45_24	1798326	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.531142	46.7	-	MFHE01	14	623	577	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314814	GCA_001778495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/495/GCA_001778495.1_ASM177849v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_02_42_15	1798329	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.649132	42	-	MFHH01	58	713	634	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314074	GCA_001778515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/515/GCA_001778515.1_ASM177851v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_FULL_48_47	1798328	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.65293	48	-	MFHG01	30	763	687	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314910	GCA_001778535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/535/GCA_001778535.1_ASM177853v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_02_43_16	1798331	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.644067	43.9	-	MFHJ01	53	794	691	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313778	GCA_001778545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/545/GCA_001778545.1_ASM177854v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_02_43_13	1798330	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.840825	43.6	-	MFHI01	41	970	881	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313775	GCA_001778555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/555/GCA_001778555.1_ASM177855v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_02_FULL_44_11	1798333	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.853445	44.2	-	MFHL01	46	993	864	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315426	GCA_001778595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/595/GCA_001778595.1_ASM177859v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_02_FULL_44_51	1798335	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.577812	43.1	-	MFHN01	17	691	637	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315429	GCA_001778615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/615/GCA_001778615.1_ASM177861v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_02_FULL_45_13	1798336	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.833541	44.3	-	MFHO01	36	983	873	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315430	GCA_001778635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/635/GCA_001778635.1_ASM177863v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_02_FULL_45_40	1798337	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.916096	44.5	-	MFHP01	34	1061	989	10/19/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04315358	GCA_001778655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/655/GCA_001778655.1_ASM177865v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_02_FULL_48_15	1798339	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.68552	47.9	-	MFHR01	17	802	717	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315514	GCA_001778665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/665/GCA_001778665.1_ASM177866v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_12_FULL_44_22	1798342	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.64301	43.3	-	MFHU01	17	768	711	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315587	GCA_001778695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/695/GCA_001778695.1_ASM177869v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_12_FULL_44_29	1798343	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.699563	44	-	MFHV01	40	837	760	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315614	GCA_001778705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/705/GCA_001778705.1_ASM177870v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_44_16	1798348	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.806761	43.9	-	MFIA01	43	957	879	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315077	GCA_001778735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/735/GCA_001778735.1_ASM177873v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_45_140	1798350	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.846712	44.5	-	MFIC01	32	982	914	10/19/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04315172	GCA_001778755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/755/GCA_001778755.1_ASM177875v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_46_13	1798352	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.664577	46	-	MFIE01	32	836	694	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315271	GCA_001778785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/785/GCA_001778785.1_ASM177878v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_48_47	1798354	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.664376	48	-	MFIG01	30	781	701	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315279	GCA_001778775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/775/GCA_001778775.1_ASM177877v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_02_44_8	1798355	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.560426	43.5	-	MFIH01	60	679	580	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314084	GCA_001778815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/815/GCA_001778815.1_ASM177881v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_02_FULL_43_37	1798357	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.686797	42.9	-	MFIJ01	25	808	738	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316016	GCA_001778835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/835/GCA_001778835.1_ASM177883v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_02_FULL_43_11b	1798356	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.827048	43.1	-	MFII01	43	978	840	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316015	GCA_001778855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/855/GCA_001778855.1_ASM177885v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_02_FULL_43_54	1798358	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.740563	43.5	-	MFIK01	47	870	777	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316082	GCA_001778875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/875/GCA_001778875.1_ASM177887v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_12_FULL_43_26	1798363	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.679615	42.8	-	MFIP01	23	815	753	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315893	GCA_001778885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/885/GCA_001778885.1_ASM177888v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_12_FULL_44_15	1798364	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.745416	44	-	MFIQ01	32	876	799	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315842	GCA_001778905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/905/GCA_001778905.1_ASM177890v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_12_FULL_44_25	1798365	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.813392	44.3	-	MFIR01	23	942	884	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315843	GCA_001778935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/935/GCA_001778935.1_ASM177893v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_12_FULL_44_32	1798366	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.757524	43.6	-	MFIS01	36	877	800	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315896	GCA_001778955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/955/GCA_001778955.1_ASM177895v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFOXYD1_FULL_48_21	1798368	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.714428	48	-	MFIU01	5	820	759	10/19/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04314766	GCA_001778985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/985/GCA_001778985.1_ASM177898v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFOXYC1_FULL_48_8	1798367	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.591864	47.6	-	MFIT01	49	742	592	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314554	GCA_001778975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/778/975/GCA_001778975.1_ASM177897v1	27774985	-
Candidatus Gottesmanbacteria bacterium RBG_13_37_7	1798369	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.975187	35.2	-	MFIY01	74	1075	626	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314020	GCA_001779015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/015/GCA_001779015.1_ASM177901v1	27774985	-
Candidatus Gottesmanbacteria bacterium RBG_13_45_10	1798370	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.1253	44.2	-	MFIZ01	38	1175	871	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314021	GCA_001779035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/035/GCA_001779035.1_ASM177903v1	27774985	-
Candidatus Gottesmanbacteria bacterium RBG_16_37_8	1798371	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.30781	37	-	MFJA01	84	1506	1132	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313735	GCA_001779055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/055/GCA_001779055.1_ASM177905v1	27774985	-
Candidatus Gottesmanbacteria bacterium RBG_16_43_7	1798373	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.0116	42.3	-	MFJC01	71	1071	759	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314275	GCA_001779065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/065/GCA_001779065.1_ASM177906v1	27774985	-
Candidatus Gottesmanbacteria bacterium RBG_16_52_11	1798374	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.46694	51.4	-	MFJD01	18	1542	1345	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314054	GCA_001779095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/095/GCA_001779095.1_ASM177909v1	27774985	-
Candidatus Gottesmanbacteria bacterium RIFCSPHIGHO2_01_FULL_40_15	1798376	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.33037	39.6	-	MFJF01	32	1350	1257	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314930	GCA_001779115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/115/GCA_001779115.1_ASM177911v1	27774985	-
Candidatus Gottesmanbacteria bacterium RIFCSPHIGHO2_01_FULL_42_27	1798378	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.39784	42.1	-	MFJH01	61	1490	1394	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314934	GCA_001779135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/135/GCA_001779135.1_ASM177913v1	27774985	-
Candidatus Gottesmanbacteria bacterium RIFCSPHIGHO2_01_FULL_42_12	1798377	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.780341	42	-	MFJG01	33	947	857	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315025	GCA_001779145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/145/GCA_001779145.1_ASM177914v1	27774985	-
Candidatus Gottesmanbacteria bacterium RIFCSPHIGHO2_01_FULL_43_15	1798379	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.31553	42.5	-	MFJI01	62	1376	1270	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314852	GCA_001779175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/175/GCA_001779175.1_ASM177917v1	27774985	-
Candidatus Gottesmanbacteria bacterium RIFCSPHIGHO2_02_FULL_39_11	1798382	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.55312	38.3	-	MFJL01	46	1633	1505	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315530	GCA_001779195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/195/GCA_001779195.1_ASM177919v1	27774985	-
Candidatus Gottesmanbacteria bacterium RIFCSPHIGHO2_02_FULL_39_14	1798383	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.43641	38.3	-	MFJM01	72	1560	1429	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315531	GCA_001779205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/205/GCA_001779205.1_ASM177920v1	27774985	-
Candidatus Gottesmanbacteria bacterium RIFCSPHIGHO2_02_FULL_40_13	1798384	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.28856	39.5	-	MFJN01	70	1346	1193	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315456	GCA_001779235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/235/GCA_001779235.1_ASM177923v1	27774985	-
Candidatus Gottesmanbacteria bacterium RIFCSPLOWO2_01_FULL_40_10	1798389	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.29321	39.2	-	MFJS01	48	1343	1124	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315301	GCA_001779265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/265/GCA_001779265.1_ASM177926v1	27774985	-
Candidatus Gottesmanbacteria bacterium RIFCSPHIGHO2_02_FULL_40_24	1798385	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.31106	39.6	-	MFJO01	35	1334	1248	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315458	GCA_001779255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/255/GCA_001779255.1_ASM177925v1	27774985	-
Candidatus Gottesmanbacteria bacterium RIFCSPHIGHO2_12_FULL_40_13	1798386	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.35848	39.5	-	MFJP01	31	1371	1262	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315594	GCA_001779275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/275/GCA_001779275.1_ASM177927v1	27774985	-
Candidatus Gottesmanbacteria bacterium RIFCSPLOWO2_01_FULL_42_22	1798391	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.41984	42	-	MFJU01	42	1513	1430	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315121	GCA_001779315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/315/GCA_001779315.1_ASM177931v1	27774985	-
Candidatus Gottesmanbacteria bacterium RIFCSPLOWO2_01_FULL_46_9	1798394	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.79191	45.4	-	MFJX01	80	889	655	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315216	GCA_001779335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/335/GCA_001779335.1_ASM177933v1	27774985	-
Candidatus Gottesmanbacteria bacterium RIFCSPLOWO2_01_FULL_46_21	1798393	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.91395	45.5	-	MFJW01	55	1088	1009	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315124	GCA_001779345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/345/GCA_001779345.1_ASM177934v1	27774985	-
Candidatus Gottesmanbacteria bacterium RIFCSPLOWO2_01_FULL_48_11	1798395	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.907395	47.6	-	MFJY01	57	1002	768	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315217	GCA_001779375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/375/GCA_001779375.1_ASM177937v1	27774985	-
Candidatus Gottesmanbacteria bacterium RIFCSPLOWO2_02_FULL_40_10	1798398	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.29486	39.4	-	MFKB01	48	1339	1113	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316068	GCA_001779385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/385/GCA_001779385.1_ASM177938v1	27774985	-
Candidatus Gottesmanbacteria bacterium RIFCSPLOWO2_02_FULL_42_29	1798399	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.35215	41.9	-	MFKC01	75	1469	1346	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316108	GCA_001779415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/415/GCA_001779415.1_ASM177941v1	27774985	-
Candidatus Gottesmanbacteria bacterium RIFCSPLOWO2_12_FULL_42_10	1798400	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.37127	41.9	-	MFKD01	95	1514	1333	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315856	GCA_001779425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/425/GCA_001779425.1_ASM177942v1	27774985	-
Candidatus Gottesmanbacteria bacterium RIFOXYB1_FULL_47_11	1798401	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.927171	47	-	MFKE01	31	1072	894	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314484	GCA_001779455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/455/GCA_001779455.1_ASM177945v1	27774985	-
Candidatus Jorgensenbacteria bacterium GWA1_49_17	1798467	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.455427	48.5	-	MFKG01	41	520	451	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314237	GCA_001779475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/475/GCA_001779475.1_ASM177947v1	27774985	-
Candidatus Jorgensenbacteria bacterium GWC1_48_12	1798469	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.456044	48	-	MFKI01	45	553	436	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314248	GCA_001779495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/495/GCA_001779495.1_ASM177949v1	27774985	-
Candidatus Jorgensenbacteria bacterium GWA1_54_12	1798468	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.512995	53.4	-	MFKH01	18	616	516	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314231	GCA_001779505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/505/GCA_001779505.1_ASM177950v1	27774985	-
Candidatus Jorgensenbacteria bacterium RIFCSPHIGHO2_02_FULL_45_20	1798470	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.608199	45.1	-	MFKJ01	31	645	582	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315508	GCA_001779535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/535/GCA_001779535.1_ASM177953v1	27774985	-
Candidatus Jorgensenbacteria bacterium RIFCSPLOWO2_02_FULL_45_12	1798472	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.609252	44.9	-	MFKL01	34	647	552	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316022	GCA_001779555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/555/GCA_001779555.1_ASM177955v1	27774985	-
Candidatus Jorgensenbacteria bacterium RIFCSPLOWO2_12_FULL_42_11	1798473	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.528733	42.1	-	MFKM01	38	613	506	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315838	GCA_001779575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/575/GCA_001779575.1_ASM177957v1	27774985	-
Candidatus Kaiserbacteria bacterium GWA2_50_9	1798474	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.729802	50.3	-	MFKN01	44	837	705	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314239	GCA_001779585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/585/GCA_001779585.1_ASM177958v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_46_22	1798475	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.646917	45.9	-	MFKO01	8	711	656	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314990	GCA_001779595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/595/GCA_001779595.1_ASM177959v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_48_10	1798476	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.725964	47.1	-	MFKP01	62	847	662	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314994	GCA_001779615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/615/GCA_001779615.1_ASM177961v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_50_13	1798478	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.844291	50.3	-	MFKR01	33	855	761	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314826	GCA_001779655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/655/GCA_001779655.1_ASM177965v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_51_33	1798479	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.618354	50.4	-	MFKS01	28	692	627	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314914	GCA_001779665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/665/GCA_001779665.1_ASM177966v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_49_13	1798477	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.447189	48.8	-	MFKQ01	36	528	448	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314824	GCA_001779675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/675/GCA_001779675.1_ASM177967v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_54_36b	1798483	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.32768	54	-	MFKW01	87	1440	1294	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314857	GCA_001779685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/685/GCA_001779685.1_ASM177968v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPLOWO2_02_FULL_38_15	1797794	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.874849	38.1	-	MFDV01	20	907	865	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315928	GCA_001779735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/735/GCA_001779735.1_ASM177973v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPLOWO2_02_FULL_36_7	1797792	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.72719	35.8	-	MFDT01	75	904	674	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316036	GCA_001779745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/745/GCA_001779745.1_ASM177974v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPLOWO2_02_FULL_40_8	1797797	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.67158	40	-	MFDY01	48	801	630	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315973	GCA_001779755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/755/GCA_001779755.1_ASM177975v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPLOWO2_02_FULL_39_13	1797796	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.26727	38.9	-	MFDX01	17	1353	1279	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316104	GCA_001779775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/775/GCA_001779775.1_ASM177977v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPLOWO2_02_FULL_43_11	1797799	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.632169	42.7	-	MFEA01	29	736	646	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316109	GCA_001779815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/815/GCA_001779815.1_ASM177981v1	27774985	-
Candidatus Daviesbacteria bacterium RIFCSPLOWO2_12_FULL_38_10	1797800	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.00249	38.1	-	MFEB01	41	1165	1099	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315906	GCA_001779835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/835/GCA_001779835.1_ASM177983v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_52_17	1817820	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.678833	52.2	-	MFEG01	76	794	678	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316194	GCA_001779845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/845/GCA_001779845.1_ASM177984v1	27774985	-
Candidatus Delongbacteria bacterium GWF2_40_14	1817817	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.7419	39.7	-	MFED01	123	1565	1385	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313960	GCA_001779875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/875/GCA_001779875.1_ASM177987v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_41_86	1817821	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.848702	42	-	MFEH01	7	949	890	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314870	GCA_001779895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/895/GCA_001779895.1_ASM177989v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_46_14	1817824	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.07523	47	-	MFEK01	17	1210	1127	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314904	GCA_001779925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/925/GCA_001779925.1_ASM177992v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_45_18	1817823	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.555565	44.5	-	MFEJ01	31	659	583	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314813	GCA_001779915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/915/GCA_001779915.1_ASM177991v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_02_FULL_46_11	1817832	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.862074	45.9	-	MFES01	38	957	817	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316136	GCA_001779955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/955/GCA_001779955.1_ASM177995v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_49_9	1817827	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.919876	49.1	-	MFEN01	69	1055	854	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314999	GCA_001779975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/975/GCA_001779975.1_ASM177997v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_12_FULL_42_22	1817835	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.852684	42	-	MFEV01	8	954	894	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315580	GCA_001779985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/985/GCA_001779985.1_ASM177998v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_12_FULL_48_11	1817837	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.795324	48.3	-	MFEX01	32	923	800	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315650	GCA_001779995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/779/995/GCA_001779995.1_ASM177999v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_12_FULL_48_16	1817838	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.925071	48.7	-	MFEY01	9	1026	958	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315581	GCA_001780035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/035/GCA_001780035.1_ASM178003v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPLOWO2_01_FULL_48_57	1817842	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.86741	47.6	-	MFFC01	40	953	885	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315236	GCA_001780065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/065/GCA_001780065.1_ASM178006v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPLOWO2_01_FULL_42_60	1817840	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.851614	42	-	MFFA01	7	950	890	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315048	GCA_001780055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/055/GCA_001780055.1_ASM178005v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPLOWO2_01_FULL_49_40	1817843	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.819235	49.1	-	MFFD01	24	911	853	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315143	GCA_001780075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/075/GCA_001780075.1_ASM178007v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPLOWO2_02_FULL_48_13	1817845	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.921934	47.6	-	MFFF01	34	1005	904	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316093	GCA_001780115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/115/GCA_001780115.1_ASM178011v1	27774985	-
Candidatus Edwardsbacteria bacterium RifOxyC12_full_54_24	1817854	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	2.79673	54	-	MFFO01	16	2500	2419	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314623	GCA_001780135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/135/GCA_001780135.1_ASM178013v1	27774985	-
Candidatus Doudnabacteria bacterium RIFCSPLOWO2_12_FULL_42_9	1817848	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.821058	41.7	-	MFFI01	43	941	845	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315877	GCA_001780145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/145/GCA_001780145.1_ASM178014v1	27774985	-
Candidatus Eisenbacteria bacterium RBG_16_71_46	1817856	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	3.72232	70.9	-	MFFQ01	128	3128	2923	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313721	GCA_001780165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/165/GCA_001780165.1_ASM178016v1	27774985	-
Candidatus Falkowbacteria bacterium RBG_13_39_14	1797985	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.14016	38.3	-	MFFS01	100	1113	938	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314004	GCA_001780195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/195/GCA_001780195.1_ASM178019v1	27774985	-
Candidatus Falkowbacteria bacterium RIFCSPHIGHO2_02_FULL_42_9	1797986	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.648756	41.3	-	MFFT01	66	675	527	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315498	GCA_001780215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/215/GCA_001780215.1_ASM178021v1	27774985	-
Candidatus Falkowbacteria bacterium RIFCSPLOWO2_12_FULL_45_10	1797990	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.65337	44.9	-	MFFX01	53	705	588	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315844	GCA_001780235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/235/GCA_001780235.1_ASM178023v1	27774985	-
Candidatus Falkowbacteria bacterium RIFOXYC12_FULL_34_55	1798000	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.53091	34	-	MFGH01	39	1466	1405	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314621	GCA_001780255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/255/GCA_001780255.1_ASM178025v1	27774985	-
Candidatus Falkowbacteria bacterium RIFOXYA2_FULL_47_19	1797994	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.71357	46.4	-	MFGB01	25	1611	1531	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314348	GCA_001780275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/275/GCA_001780275.1_ASM178027v1	27774985	-
Candidatus Falkowbacteria bacterium RIFOXYD12_FULL_34_57	1798006	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.61528	34.2	-	MFGN01	37	1504	1442	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314636	GCA_001780285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/285/GCA_001780285.1_ASM178028v1	27774985	-
Candidatus Falkowbacteria bacterium RIFOXYD2_FULL_35_9	1798008	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.98323	34.8	-	MFGP01	60	1044	866	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314654	GCA_001780315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/315/GCA_001780315.1_ASM178031v1	27774985	-
Candidatus Falkowbacteria bacterium RIFOXYD2_FULL_39_16	1798009	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.909786	38.4	-	MFGQ01	20	903	829	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314708	GCA_001780335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/335/GCA_001780335.1_ASM178033v1	27774985	-
Candidatus Firestonebacteria bacterium RifOxyC12_full_39_7	1817860	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	2.02372	39	-	MFGT01	192	1882	1504	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314618	GCA_001780345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/345/GCA_001780345.1_ASM178034v1	27774985	-
Candidatus Firestonebacteria bacterium RIFOXYC2_FULL_39_67	1817861	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	3.1324	39.3	-	MFGU01	92	2720	2630	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314573	GCA_001780375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/375/GCA_001780375.1_ASM178037v1	27774985	-
Candidatus Fischerbacteria bacterium RBG_13_37_8	1817863	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	5.23663	38	-	MFGW01	253	4448	3063	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313983	GCA_001780385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/385/GCA_001780385.1_ASM178038v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_FULL_43_100	1798322	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.59601	43.1	-	MFHA01	43	687	619	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314892	GCA_001780415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/415/GCA_001780415.1_ASM178041v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_FULL_44_100	1798324	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.882813	44.4	-	MFHC01	35	1035	960	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314809	GCA_001780425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/425/GCA_001780425.1_ASM178042v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_FULL_45_33	1798327	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.814835	44.3	-	MFHF01	38	954	878	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314815	GCA_001780445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/445/GCA_001780445.1_ASM178044v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_02_FULL_43_32	1798332	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.770605	43.1	-	MFHK01	30	879	804	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315350	GCA_001780475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/475/GCA_001780475.1_ASM178047v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_02_FULL_44_31	1798334	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.674691	43.9	-	MFHM01	43	806	733	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315428	GCA_001780495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/495/GCA_001780495.1_ASM178049v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_02_FULL_46_20	1798338	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.654571	45.7	-	MFHQ01	41	690	603	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316144	GCA_001780515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/515/GCA_001780515.1_ASM178051v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_12_44_12	1798340	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.534728	44	-	MFHS01	48	639	555	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313769	GCA_001780535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/535/GCA_001780535.1_ASM178053v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_12_FULL_43_15	1798341	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.760864	43	-	MFHT01	32	881	803	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315675	GCA_001780555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/555/GCA_001780555.1_ASM178055v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_12_FULL_44_42	1798344	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.776096	43.6	-	MFHW01	41	895	814	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315559	GCA_001780565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/565/GCA_001780565.1_ASM178056v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_43_160	1798346	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.605305	42.9	-	MFHY01	24	728	667	10/19/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04315258	GCA_001780595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/595/GCA_001780595.1_ASM178059v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_12_FULL_45_19	1798345	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.891645	44.5	-	MFHX01	38	1039	960	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315615	GCA_001780605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/605/GCA_001780605.1_ASM178060v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_43_60	1798347	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.655062	43.3	-	MFHZ01	34	760	691	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315168	GCA_001780635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/635/GCA_001780635.1_ASM178063v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_44_40	1798349	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.81444	44.3	-	MFIB01	38	940	857	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315079	GCA_001780645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/645/GCA_001780645.1_ASM178064v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_46_32	1798353	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.699622	46.8	-	MFIF01	17	802	739	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315272	GCA_001780675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/675/GCA_001780675.1_ASM178067v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_45_34	1798351	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.784961	44.4	-	MFID01	35	901	832	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315083	GCA_001780695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/695/GCA_001780695.1_ASM178069v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_02_FULL_45_14	1798359	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.758746	43.9	-	MFIL01	40	894	800	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315953	GCA_001780705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/705/GCA_001780705.1_ASM178070v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_02_FULL_45_28	1798360	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.886299	44.6	-	MFIM01	29	1026	958	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316024	GCA_001780725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/725/GCA_001780725.1_ASM178072v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_12_43_8	1798361	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.536323	43.2	-	MFIN01	59	665	557	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313968	GCA_001780755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/755/GCA_001780755.1_ASM178075v1	27774985	-
Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_12_FULL_43_11c	1798362	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.796513	42.9	-	MFIO01	35	938	840	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315892	GCA_001780775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/775/GCA_001780775.1_ASM178077v1	27774985	-
Candidatus Glassbacteria bacterium RBG_16_58_8	1817866	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.883905	55.2	-	MFIW01	106	987	446	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314027	GCA_001780795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/795/GCA_001780795.1_ASM178079v1	27774985	-
Candidatus Glassbacteria bacterium GWA2_58_10	1817865	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	2.66716	55.7	-	MFIV01	255	2497	1366	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314107	GCA_001780805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/805/GCA_001780805.1_ASM178080v1	27774985	-
Candidatus Glassbacteria bacterium RIFCSPLOWO2_12_FULL_58_11	1817867	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	4.17003	57.8	-	MFIX01	263	3455	2888	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315771	GCA_001780825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/825/GCA_001780825.1_ASM178082v1	27774985	-
Candidatus Gottesmanbacteria bacterium RBG_16_38_7b	1798372	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.07655	37.2	-	MFJB01	92	1301	855	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314274	GCA_001780855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/855/GCA_001780855.1_ASM178085v1	27774985	-
Candidatus Gottesmanbacteria bacterium RIFCSPHIGHO2_01_FULL_39_10	1798375	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.30161	38.6	-	MFJE01	68	1480	1285	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314926	GCA_001780865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/865/GCA_001780865.1_ASM178086v1	27774985	-
Candidatus Gottesmanbacteria bacterium RIFCSPHIGHO2_01_FULL_46_14	1798380	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.942875	45.8	-	MFJJ01	63	1118	997	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315028	GCA_001780895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/895/GCA_001780895.1_ASM178089v1	27774985	-
Candidatus Gottesmanbacteria bacterium RIFCSPHIGHO2_01_FULL_47_48	1798381	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.644135	47.7	-	MFJK01	18	693	662	10/19/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04314874	GCA_001780905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/905/GCA_001780905.1_ASM178090v1	27774985	-
Candidatus Gottesmanbacteria bacterium RIFCSPHIGHO2_12_FULL_43_26	1798387	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.29156	42.2	-	MFJQ01	77	1399	1294	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315624	GCA_001780935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/935/GCA_001780935.1_ASM178093v1	27774985	-
Candidatus Gottesmanbacteria bacterium RIFCSPLOWO2_01_FULL_39_12b	1798388	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.27095	37.8	-	MFJR01	15	1326	1240	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315113	GCA_001780955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/955/GCA_001780955.1_ASM178095v1	27774985	-
Candidatus Gottesmanbacteria bacterium RIFCSPLOWO2_01_FULL_42_10	1798390	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.20598	41.9	-	MFJT01	93	1326	1027	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315212	GCA_001780975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/975/GCA_001780975.1_ASM178097v1	27774985	-
Candidatus Gottesmanbacteria bacterium RIFCSPLOWO2_01_FULL_43_11b	1798392	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.0203	42.9	-	MFJV01	1	1140	1081	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315232	GCA_001780985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/780/985/GCA_001780985.1_ASM178098v1	27774985	-
Candidatus Gottesmanbacteria bacterium RIFCSPLOWO2_02_FULL_38_8	1798397	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.05764	37.8	-	MFKA01	104	1253	894	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316039	GCA_001781015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/015/GCA_001781015.1_ASM178101v1	27774985	-
Candidatus Gottesmanbacteria bacterium RIFCSPLOWO2_01_FULL_49_10	1798396	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.05011	48	-	MFJZ01	72	1173	917	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315126	GCA_001781025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/025/GCA_001781025.1_ASM178102v1	27774985	-
Candidatus Jorgensenbacteria bacterium RIFCSPLOWO2_01_FULL_45_25b	1798471	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.803513	45.2	-	MFKK01	38	858	779	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315174	GCA_001781035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/035/GCA_001781035.1_ASM178103v1	27774985	-
Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	1817868	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	6.74792	64.9	-	MFKF01	441	5958	5364	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315772	GCA_001781055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/055/GCA_001781055.1_ASM178105v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_53_31	1798481	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.667081	52.5	-	MFKU01	16	741	688	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314831	GCA_001781095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/095/GCA_001781095.1_ASM178109v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_53_29	1798480	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.11116	53.5	-	MFKT01	29	1168	1107	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315004	GCA_001781125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/125/GCA_001781125.1_ASM178112v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_55_17	1798484	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.750484	55	-	MFKX01	29	860	774	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315006	GCA_001781115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/115/GCA_001781115.1_ASM178111v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_54_36	1798482	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.869063	53.8	-	MFKV01	31	950	896	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314916	GCA_001781105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/105/GCA_001781105.1_ASM178110v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_55_37	1798485	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.862658	54.9	-	MFKY01	58	939	840	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314833	GCA_001781175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/175/GCA_001781175.1_ASM178117v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_55_79	1798486	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.716541	55.4	-	MFKZ01	50	827	755	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314917	GCA_001781195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/195/GCA_001781195.1_ASM178119v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_02_FULL_49_34	1798491	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.828497	48.4	-	MFLE01	26	853	790	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315440	GCA_001781205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/205/GCA_001781205.1_ASM178120v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_02_FULL_49_11	1798489	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.587264	49.1	-	MFLC01	39	682	555	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315515	GCA_001781215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/215/GCA_001781215.1_ASM178121v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_02_FULL_50_50	1798492	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.825933	50.4	-	MFLF01	21	863	810	10/19/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04315442	GCA_001781255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/255/GCA_001781255.1_ASM178125v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_02_FULL_54_11b	1798494	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.74159	53.7	-	MFLH01	56	845	689	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315371	GCA_001781275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/275/GCA_001781275.1_ASM178127v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_02_FULL_54_22	1798495	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.676382	54.3	-	MFLI01	20	747	689	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315372	GCA_001781285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/285/GCA_001781285.1_ASM178128v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_02_FULL_55_17	1798496	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.582206	55.3	-	MFLJ01	38	671	583	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315447	GCA_001781305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/305/GCA_001781305.1_ASM178130v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_02_FULL_55_25	1798498	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.867957	55.2	-	MFLL01	33	1011	939	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315373	GCA_001781335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/335/GCA_001781335.1_ASM178133v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_02_FULL_59_21	1798500	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.841427	58.4	-	MFLN01	43	917	843	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315374	GCA_001781355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/355/GCA_001781355.1_ASM178135v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_02_FULL_56_30	1798499	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.425485	56.3	-	MFLM01	30	493	440	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315448	GCA_001781365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/365/GCA_001781365.1_ASM178136v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_12_45_16	1798501	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.882077	44.9	-	MFLO01	97	991	879	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314077	GCA_001781375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/375/GCA_001781375.1_ASM178137v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_01_FULL_45_25	1798506	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.96277	45.1	-	MFLT01	13	1011	952	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315082	GCA_001781415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/415/GCA_001781415.1_ASM178141v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_01_FULL_51_21	1798508	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.629313	50.4	-	MFLV01	28	698	621	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315188	GCA_001781435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/435/GCA_001781435.1_ASM178143v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_58_22	1798488	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.808394	58.3	-	MFLB01	48	875	799	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314919	GCA_001781445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/445/GCA_001781445.1_ASM178144v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_02_FULL_49_16	1798490	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.904852	48.4	-	MFLD01	46	1002	911	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315439	GCA_001781465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/465/GCA_001781465.1_ASM178146v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_56_24	1798487	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.25106	56.3	-	MFLA01	49	1344	1238	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314918	GCA_001781475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/475/GCA_001781475.1_ASM178147v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_02_FULL_55_20	1798497	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.880595	54.9	-	MFLK01	54	957	846	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315524	GCA_001781515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/515/GCA_001781515.1_ASM178151v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_02_FULL_50_9	1798493	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.533142	49.7	-	MFLG01	50	649	509	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315519	GCA_001781525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/525/GCA_001781525.1_ASM178152v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_12_FULL_54_16	1798503	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.684694	54.1	-	MFLQ01	21	765	692	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315651	GCA_001781565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/565/GCA_001781565.1_ASM178156v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_12_FULL_53_13	1798502	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.682109	52.4	-	MFLP01	38	731	642	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315679	GCA_001781555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/555/GCA_001781555.1_ASM178155v1	27774985	-
Candidatus Edwardsbacteria bacterium RifOxyB12_full_52_30	1817853	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	2.77869	54	-	MFWT01	10	2481	2410	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314470	GCA_001781595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/595/GCA_001781595.1_ASM178159v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_12_FULL_55_13	1798504	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.877618	55	-	MFLR01	48	1030	901	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315744	GCA_001781605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/605/GCA_001781605.1_ASM178160v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_12_FULL_56_13	1798505	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.512403	55.9	-	MFLS01	34	596	501	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315617	GCA_001781625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/625/GCA_001781625.1_ASM178162v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_01_FULL_52_12b	1798509	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.509112	51.6	-	MFLW01	29	632	502	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315189	GCA_001781635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/635/GCA_001781635.1_ASM178163v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_01_FULL_52_36	1798510	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.615568	52.3	-	MFLX01	39	657	592	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315190	GCA_001781675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/675/GCA_001781675.1_ASM178167v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_01_FULL_54_13	1798512	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.873411	53.8	-	MFLZ01	42	997	863	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315192	GCA_001781685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/685/GCA_001781685.1_ASM178168v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_01_FULL_55_19	1798516	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.426361	55	-	MFMD01	39	484	399	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315103	GCA_001781715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/715/GCA_001781715.1_ASM178171v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_01_FULL_54_22	1798514	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.878666	53.8	-	MFMB01	31	958	893	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315194	GCA_001781725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/725/GCA_001781725.1_ASM178172v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_02_FULL_55_12	1798522	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.51252	54.4	-	MFMJ01	51	584	458	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316099	GCA_001781755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/755/GCA_001781755.1_ASM178175v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_02_FULL_56_11	1798523	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.438922	55.5	-	MFMK01	33	524	373	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315965	GCA_001781765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/765/GCA_001781765.1_ASM178176v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_02_FULL_59_19	1798524	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.805717	58.4	-	MFML01	42	884	793	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316035	GCA_001781795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/795/GCA_001781795.1_ASM178179v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_12_FULL_45_26	1798525	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.96258	45.1	-	MFMM01	1	1003	961	10/19/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04315878	GCA_001781805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/805/GCA_001781805.1_ASM178180v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_12_FULL_52_8	1798528	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.617268	52.4	-	MFMP01	51	727	628	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315851	GCA_001781835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/835/GCA_001781835.1_ASM178183v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_12_FULL_50_28	1798527	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.601349	49.7	-	MFMO01	52	627	560	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315903	GCA_001781845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/845/GCA_001781845.1_ASM178184v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_12_FULL_53_8	1798529	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.781479	53.4	-	MFMQ01	87	865	738	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315904	GCA_001781875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/875/GCA_001781875.1_ASM178187v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_12_FULL_54_10	1798530	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.594662	54.2	-	MFMR01	46	687	581	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315800	GCA_001781885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/885/GCA_001781885.1_ASM178188v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFOXYD1_FULL_47_14	1798533	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.62831	46.9	-	MFMU01	23	723	611	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314762	GCA_001781915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/915/GCA_001781915.1_ASM178191v1	27774985	-
Candidatus Kuenenbacteria bacterium RIFCSPLOWO2_02_FULL_42_16	1798564	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.804773	42.1	-	MFMZ01	63	814	716	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315943	GCA_001781935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/935/GCA_001781935.1_ASM178193v1	27774985	-
Candidatus Lambdaproteobacteria bacterium RIFOXYD1_FULL_56_27	1817770	PRJNA288027	288027	Proteobacteria	Candidatus Lambdaproteobacteria	3.12018	56.5	-	MFNC01	74	2858	2762	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314753	GCA_001781945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/945/GCA_001781945.1_ASM178194v1	27774985	-
Candidatus Lambdaproteobacteria bacterium RIFOXYD12_FULL_49_8	1817771	PRJNA288027	288027	Proteobacteria	Candidatus Lambdaproteobacteria	1.97283	48.3	-	MFND01	180	2148	1385	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314629	GCA_001781965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/965/GCA_001781965.1_ASM178196v1	27774985	-
Candidatus Levybacteria bacterium RBG_16_35_11	1798584	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.23251	35.1	-	MFNH01	72	1407	1251	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313743	GCA_001781995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/781/995/GCA_001781995.1_ASM178199v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_36_15	1798586	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.37145	35.4	-	MFNJ01	60	1430	1325	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315010	GCA_001782015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/015/GCA_001782015.1_ASM178201v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_37_17	1798588	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.72649	36.8	-	MFNL01	4	816	766	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314951	GCA_001782035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/035/GCA_001782035.1_ASM178203v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_36_15b	1798587	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.798884	35.2	-	MFNK01	12	894	831	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314837	GCA_001782045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/045/GCA_001782045.1_ASM178204v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_38_26	1798591	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.13471	38	-	MFNO01	38	1231	1150	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314840	GCA_001782075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/075/GCA_001782075.1_ASM178207v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_37_33	1798589	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.849851	37.2	-	MFNM01	52	999	901	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315013	GCA_001782085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/085/GCA_001782085.1_ASM178208v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_38_96	1798592	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.598828	38.3	-	MFNP01	57	633	562	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314842	GCA_001782115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/115/GCA_001782115.1_ASM178211v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_40_15b	1798594	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.692208	39.5	-	MFNR01	59	864	728	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315021	GCA_001782125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/125/GCA_001782125.1_ASM178212v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_41_15	1798598	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.728446	38	-	MFNV01	10	817	758	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314782	GCA_001782165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/165/GCA_001782165.1_ASM178216v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPHIGHO2_02_FULL_37_11	1798601	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.609559	37	-	MFNY01	46	738	648	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315450	GCA_001782155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/155/GCA_001782155.1_ASM178215v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPHIGHO2_02_FULL_37_13	1798602	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.08785	36.6	-	MFNZ01	66	1166	1030	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315527	GCA_001782195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/195/GCA_001782195.1_ASM178219v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPHIGHO2_02_FULL_37_18	1798603	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.649002	36.3	-	MFOA01	19	683	650	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315528	GCA_001782205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/205/GCA_001782205.1_ASM178220v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPHIGHO2_02_FULL_40_18	1798605	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.995372	40	-	MFOC01	7	1067	1012	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315383	GCA_001782235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/235/GCA_001782235.1_ASM178223v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPHIGHO2_02_FULL_39_36	1798604	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.74599	38.9	-	MFOB01	56	801	722	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315380	GCA_001782255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/255/GCA_001782255.1_ASM178225v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPHIGHO2_02_FULL_40_29	1798606	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.824587	39.9	-	MFOD01	29	934	859	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315535	GCA_001782265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/265/GCA_001782265.1_ASM178226v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPHIGHO2_12_FULL_37_12	1798608	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.749358	37.2	-	MFOF01	58	894	772	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315682	GCA_001782295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/295/GCA_001782295.1_ASM178229v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPHIGHO2_12_FULL_37_9	1798609	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.968853	36.2	-	MFOG01	78	1091	837	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315592	GCA_001782315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/315/GCA_001782315.1_ASM178231v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPHIGHO2_12_FULL_39_9	1798611	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.741058	38.5	-	MFOJ01	28	877	759	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315565	GCA_001782335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/335/GCA_001782335.1_ASM178233v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPHIGHO2_12_FULL_40_31	1798612	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.996106	40	-	MFOK01	10	1069	1014	10/19/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04315595	GCA_001782345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/345/GCA_001782345.1_ASM178234v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPHIGHO2_12_FULL_38_12	1798610	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.11536	37.1	-	MFOH01	45	1135	1041	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315683	GCA_001782355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/355/GCA_001782355.1_ASM178235v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPHIGHO2_12_FULL_40_44	1798613	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.704736	40.4	-	MFOL01	45	806	724	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315622	GCA_001782395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/395/GCA_001782395.1_ASM178239v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPLOWO2_01_FULL_36_13	1798614	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.821705	35.2	-	MFON01	16	926	852	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315291	GCA_001782415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/415/GCA_001782415.1_ASM178241v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPLOWO2_01_FULL_37_20	1798616	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.966394	37	-	MFOP01	30	975	925	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315200	GCA_001782445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/445/GCA_001782445.1_ASM178244v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPLOWO2_01_FULL_38_120	1798618	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.547896	38.1	-	MFOR01	50	586	525	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315296	GCA_001782435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/435/GCA_001782435.1_ASM178243v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPLOWO2_01_FULL_38_21	1798620	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.787844	37	-	MFOT01	28	884	802	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315297	GCA_001782475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/475/GCA_001782475.1_ASM178247v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPLOWO2_01_FULL_38_23	1798621	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.725899	37	-	MFOU01	7	817	764	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315112	GCA_001782495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/495/GCA_001782495.1_ASM178249v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPLOWO2_01_FULL_39_10	1798622	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.921647	37.6	-	MFOV01	31	1040	904	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315204	GCA_001782515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/515/GCA_001782515.1_ASM178251v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPLOWO2_01_FULL_39_24	1798623	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.902951	38.4	-	MFOW01	11	1001	935	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315300	GCA_001782525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/525/GCA_001782525.1_ASM178252v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPLOWO2_02_FULL_37_11	1798629	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.495529	36.5	-	MFPC01	45	561	456	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316037	GCA_001782565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/565/GCA_001782565.1_ASM178256v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPLOWO2_02_FULL_37_10	1798628	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.618731	36.9	-	MFPB01	49	738	603	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315938	GCA_001782555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/555/GCA_001782555.1_ASM178255v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPLOWO2_02_FULL_39_26	1798631	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.743474	39	-	MFPE01	50	799	709	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315970	GCA_001782605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/605/GCA_001782605.1_ASM178260v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPLOWO2_02_FULL_40_18	1798632	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.851565	40	-	MFPF01	11	946	882	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316106	GCA_001782595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/595/GCA_001782595.1_ASM178259v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPLOWO2_02_FULL_41_11	1798633	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.989451	39.9	-	MFPG01	17	1076	987	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316042	GCA_001782635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/635/GCA_001782635.1_ASM178263v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPLOWO2_12_FULL_37_14	1798634	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.818109	36.8	-	MFPH01	68	922	824	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315905	GCA_001782645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/645/GCA_001782645.1_ASM178264v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPLOWO2_12_FULL_37_7	1798635	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.634919	37	-	MFPI01	63	692	602	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315801	GCA_001782685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/685/GCA_001782685.1_ASM178268v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPLOWO2_12_FULL_39_17	1798636	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.907069	38.6	-	MFPJ01	47	959	869	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315854	GCA_001782675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/675/GCA_001782675.1_ASM178267v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPLOWO2_12_FULL_40_10	1798637	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.967652	39.9	-	MFPK01	19	1047	976	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315803	GCA_001782715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/715/GCA_001782715.1_ASM178271v1	27774985	-
Candidatus Levybacteria bacterium RIFOXYA1_FULL_41_10	1798639	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.802305	40.1	-	MFPM01	21	905	799	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314307	GCA_001782725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/725/GCA_001782725.1_ASM178272v1	27774985	-
Candidatus Levybacteria bacterium RIFOXYC1_FULL_40_10	1798641	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.848748	39.9	-	MFPO01	23	958	864	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314544	GCA_001782735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/735/GCA_001782735.1_ASM178273v1	27774985	-
Candidatus Levybacteria bacterium RIFOXYD1_FULL_40_21	1798642	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.854303	40.1	-	MFPP01	25	948	869	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314749	GCA_001782755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/755/GCA_001782755.1_ASM178275v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFCSPHIGHO2_01_FULL_41_23	1798672	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.9923	40.8	-	MFPT01	24	964	912	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314974	GCA_001782805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/805/GCA_001782805.1_ASM178280v1	27774985	-
Candidatus Lindowbacteria bacterium RIFCSPLOWO2_02_FULL_62_12	1817869	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	3.93992	61.3	-	MFPQ01	148	3403	2836	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315994	GCA_001782795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/795/GCA_001782795.1_ASM178279v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFCSPHIGHO2_01_FULL_33_34	1798671	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.00572	32.9	-	MFPS01	9	970	913	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314878	GCA_001782825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/825/GCA_001782825.1_ASM178282v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFCSPHIGHO2_01_FULL_50_8	1798674	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.660717	49.9	-	MFPV01	59	729	581	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315001	GCA_001782815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/815/GCA_001782815.1_ASM178281v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFCSPHIGHO2_02_FULL_33_17	1798675	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.042	32.9	-	MFPW01	14	1003	934	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315336	GCA_001782875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/875/GCA_001782875.1_ASM178287v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFCSPHIGHO2_02_FULL_41_35	1798677	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.680532	41	-	MFPY01	13	630	597	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315419	GCA_001782895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/895/GCA_001782895.1_ASM178289v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFCSPHIGHO2_02_FULL_51_14	1798683	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.935985	51	-	MFQE01	77	975	803	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315443	GCA_001782905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/905/GCA_001782905.1_ASM178290v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFCSPHIGHO2_12_FULL_41_16	1798684	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.00379	40.7	-	MFQF01	29	988	919	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315674	GCA_001782935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/935/GCA_001782935.1_ASM178293v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFCSPLOWO2_01_FULL_43_20b	1798687	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.966805	43.2	-	MFQI01	46	958	861	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315074	GCA_001782965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/965/GCA_001782965.1_ASM178296v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFCSPLOWO2_01_FULL_33_34	1798685	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.01852	32.9	-	MFQG01	7	977	919	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315242	GCA_001782955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/955/GCA_001782955.1_ASM178295v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFCSPHIGHO2_02_FULL_50_9b	1798682	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.779681	49.8	-	MFQD01	47	868	712	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315368	GCA_001782975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/782/975/GCA_001782975.1_ASM178297v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFCSPLOWO2_02_FULL_43_22	1798688	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.950365	43.2	-	MFQJ01	49	933	841	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316081	GCA_001783015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/015/GCA_001783015.1_ASM178301v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFCSPLOWO2_02_FULL_47_16	1798690	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.11077	46.9	-	MFQL01	10	1055	990	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316062	GCA_001783045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/045/GCA_001783045.1_ASM178304v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFCSPLOWO2_02_FULL_44_11	1798689	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.983287	44.4	-	MFQK01	56	1015	861	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316017	GCA_001783035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/035/GCA_001783035.1_ASM178303v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFCSPLOWO2_12_FULL_43_12	1798692	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.04997	43.2	-	MFQN01	34	1033	943	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315788	GCA_001783065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/065/GCA_001783065.1_ASM178306v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFCSPLOWO2_12_FULL_47_9b	1798693	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.962267	46.7	-	MFQO01	56	971	855	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315796	GCA_001783105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/105/GCA_001783105.1_ASM178310v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFOXYA2_FULL_40_20	1798695	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.805466	40.4	-	MFQQ01	69	792	688	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314345	GCA_001783095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/095/GCA_001783095.1_ASM178309v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFOXYB2_FULL_38_10	1798698	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.854266	39.4	-	MFQT01	20	834	752	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314415	GCA_001783145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/145/GCA_001783145.1_ASM178314v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFOXYA2_FULL_44_8	1798696	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.814391	44.4	-	MFQR01	73	882	610	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314382	GCA_001783135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/135/GCA_001783135.1_ASM178313v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFOXYC12_FULL_32_21b	1798700	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.679632	32.3	-	MFQV01	139	705	567	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314609	GCA_001783175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/175/GCA_001783175.1_ASM178317v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFOXYC2_FULL_40_16	1798703	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.970672	40.6	-	MFQY01	65	970	851	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314590	GCA_001783185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/185/GCA_001783185.1_ASM178318v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFOXYC2_FULL_39_8	1798702	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.932901	38.5	-	MFQX01	64	967	754	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314600	GCA_001783195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/195/GCA_001783195.1_ASM178319v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFOXYD1_FULL_40_23	1798705	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.07434	39.6	-	MFRA01	8	1089	1035	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314716	GCA_001783215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/215/GCA_001783215.1_ASM178321v1	27774985	-
Candidatus Margulisbacteria bacterium GWD2_39_127	1817871	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	3.28827	38.5	-	MFRF01	83	2811	2744	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313864	GCA_001783265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/265/GCA_001783265.1_ASM178326v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFOXYD12_FULL_33_17	1798706	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.02234	32.4	-	MFRB01	134	1032	881	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314628	GCA_001783255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/255/GCA_001783255.1_ASM178325v1	27774985	-
Candidatus Margulisbacteria bacterium GWF2_35_9	1817873	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	2.34621	34.5	-	MFRH01	100	2208	1983	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313961	GCA_001783275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/275/GCA_001783275.1_ASM178327v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFOXYD2_FULL_39_9	1798708	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.00791	39.1	-	MFRD01	55	1074	886	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314655	GCA_001783315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/315/GCA_001783315.1_ASM178331v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_01_FULL_50_24	1798507	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.848802	50.4	-	MFLU01	22	852	789	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315187	GCA_001783335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/335/GCA_001783335.1_ASM178333v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_01_FULL_54_20	1798513	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.652615	53.7	-	MFMA01	57	726	623	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315193	GCA_001783355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/355/GCA_001783355.1_ASM178335v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_01_FULL_53_17	1798511	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.904543	53.3	-	MFLY01	50	1005	894	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315191	GCA_001783385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/385/GCA_001783385.1_ASM178338v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_01_FULL_54_24	1798515	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.711265	54.4	-	MFMC01	49	809	719	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315288	GCA_001783375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/375/GCA_001783375.1_ASM178337v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_01_FULL_55_25	1798517	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.828269	55.1	-	MFME01	24	958	878	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315195	GCA_001783415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/415/GCA_001783415.1_ASM178341v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_02_FULL_45_11b	1798519	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.954102	45	-	MFMG01	10	1010	920	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316087	GCA_001783435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/435/GCA_001783435.1_ASM178343v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_01_FULL_59_34	1798518	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.686003	58.4	-	MFMF01	44	758	685	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315105	GCA_001783445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/445/GCA_001783445.1_ASM178344v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_02_FULL_54_13	1798521	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.682554	54	-	MFMI01	32	775	641	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316034	GCA_001783465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/465/GCA_001783465.1_ASM178346v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_02_FULL_51_13	1798520	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.851103	50.4	-	MFMH01	30	861	769	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315962	GCA_001783485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/485/GCA_001783485.1_ASM178348v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_12_FULL_50_10	1798526	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.819113	50.4	-	MFMN01	28	869	792	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315850	GCA_001783515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/515/GCA_001783515.1_ASM178351v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFOXYB1_FULL_46_14	1798531	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.632575	46.5	-	MFMS01	8	680	608	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314513	GCA_001783525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/525/GCA_001783525.1_ASM178352v1	27774985	-
Candidatus Kaiserbacteria bacterium RIFOXYD1_FULL_42_15	1798532	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.757479	41.7	-	MFMT01	43	756	678	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314745	GCA_001783565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/565/GCA_001783565.1_ASM178356v1	27774985	-
Candidatus Kuenenbacteria bacterium RBG_16_41_7	1798560	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.668129	40.5	-	MFMV01	61	762	474	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313716	GCA_001783555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/555/GCA_001783555.1_ASM178355v1	27774985	-
Candidatus Kuenenbacteria bacterium RIFCSPHIGHO2_02_FULL_39_13	1798561	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.717032	38.8	-	MFMW01	34	747	649	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315340	GCA_001783595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/595/GCA_001783595.1_ASM178359v1	27774985	-
Candidatus Kuenenbacteria bacterium RIFCSPHIGHO2_02_FULL_42_29	1798562	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.529092	42.2	-	MFMX01	51	535	466	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315421	GCA_001783615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/615/GCA_001783615.1_ASM178361v1	27774985	-
Candidatus Kuenenbacteria bacterium RIFCSPHIGHO2_12_FULL_42_14	1798563	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.778731	41.9	-	MFMY01	66	811	682	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315557	GCA_001783635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/635/GCA_001783635.1_ASM178363v1	27774985	-
Candidatus Kuenenbacteria bacterium RIFCSPLOWO2_12_FULL_42_13	1798565	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.731629	42	-	MFNA01	53	747	643	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315891	GCA_001783645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/645/GCA_001783645.1_ASM178364v1	27774985	-
Candidatus Lambdaproteobacteria bacterium RIFOXYC1_FULL_56_13	1817769	PRJNA288027	288027	Proteobacteria	Candidatus Lambdaproteobacteria	3.09424	56.5	-	MFNB01	66	2845	2724	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314547	GCA_001783655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/655/GCA_001783655.1_ASM178365v1	27774985	-
Candidatus Lambdaproteobacteria bacterium RIFOXYD2_FULL_50_16	1817772	PRJNA288027	288027	Proteobacteria	Candidatus Lambdaproteobacteria	3.14003	49.6	-	MFNE01	54	2955	2798	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314648	GCA_001783695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/695/GCA_001783695.1_ASM178369v1	27774985	-
Candidatus Levybacteria bacterium RBG_16_35_6	1798585	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.688327	34.4	-	MFNI01	71	835	544	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314273	GCA_001783725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/725/GCA_001783725.1_ASM178372v1	27774985	-
Candidatus Lambdaproteobacteria bacterium RIFOXYD2_FULL_56_26	1817773	PRJNA288027	288027	Proteobacteria	Candidatus Lambdaproteobacteria	3.07637	56.5	-	MFNF01	68	2830	2743	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314710	GCA_001783715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/715/GCA_001783715.1_ASM178371v1	27774985	-
Candidatus Levybacteria bacterium RBG_13_35_9	1798583	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.515795	33.5	-	MFNG01	46	612	384	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314292	GCA_001783735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/735/GCA_001783735.1_ASM178373v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_38_12	1798590	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.982227	37	-	MFNN01	37	1002	925	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314923	GCA_001783775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/775/GCA_001783775.1_ASM178377v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_40_16	1798595	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.897674	38.3	-	MFNS01	7	992	934	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314953	GCA_001783805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/805/GCA_001783805.1_ASM178380v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_40_10	1798593	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.616503	39.4	-	MFNQ01	58	700	541	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314929	GCA_001783795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/795/GCA_001783795.1_ASM178379v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_40_58	1798596	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.02518	39.9	-	MFNT01	16	1098	1038	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315022	GCA_001783815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/815/GCA_001783815.1_ASM178381v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_40_83	1798597	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.647239	39.8	-	MFNU01	52	742	656	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314848	GCA_001783845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/845/GCA_001783845.1_ASM178384v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_42_15	1798599	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.421416	41.5	-	MFNW01	27	461	410	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314851	GCA_001783875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/875/GCA_001783875.1_ASM178387v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPHIGHO2_02_FULL_37_10	1798600	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.61802	36.9	-	MFNX01	52	718	603	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315375	GCA_001783885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/885/GCA_001783885.1_ASM178388v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPHIGHO2_02_FULL_42_12	1798607	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.554929	41.8	-	MFOE01	34	601	517	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316157	GCA_001783905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/905/GCA_001783905.1_ASM178390v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPHIGHO2_12_FULL_39_39	1798643	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.613377	39	-	MFOI01	47	660	596	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315620	GCA_001783935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/935/GCA_001783935.1_ASM178393v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPLOWO2_01_FULL_36_10	1817734	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.25642	35.6	-	MFOM01	73	1354	1135	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315058	GCA_001783955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/955/GCA_001783955.1_ASM178395v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPLOWO2_01_FULL_36_54	1798615	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.636653	36.6	-	MFOO01	36	743	677	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315106	GCA_001783975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/975/GCA_001783975.1_ASM178397v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPLOWO2_01_FULL_38_13	1798619	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.58925	38.1	-	MFOS01	11	668	601	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315111	GCA_001783985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/985/GCA_001783985.1_ASM178398v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPLOWO2_01_FULL_37_26	1798617	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.968293	36.7	-	MFOQ01	65	1040	932	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315294	GCA_001783995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/783/995/GCA_001783995.1_ASM178399v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPLOWO2_01_FULL_40_64	1798624	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.00801	39.9	-	MFOX01	14	1083	1023	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315047	GCA_001784035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/035/GCA_001784035.1_ASM178403v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPLOWO2_01_FULL_40_96	1798625	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.668674	39.9	-	MFOY01	57	772	687	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315118	GCA_001784045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/045/GCA_001784045.1_ASM178404v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPLOWO2_01_FULL_42_15	1798626	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.680392	41	-	MFOZ01	44	746	638	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315306	GCA_001784055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/055/GCA_001784055.1_ASM178405v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPLOWO2_02_FULL_36_8b	1798627	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.872306	35.9	-	MFPA01	84	968	727	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315967	GCA_001784095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/095/GCA_001784095.1_ASM178409v1	27774985	-
Candidatus Levybacteria bacterium RIFOXYB1_FULL_40_17	1798640	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.910759	40.1	-	MFPN01	22	1016	926	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314517	GCA_001784125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/125/GCA_001784125.1_ASM178412v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPLOWO2_02_FULL_37_18	1798630	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.11075	36.8	-	MFPD01	31	1108	1051	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316102	GCA_001784115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/115/GCA_001784115.1_ASM178411v1	27774985	-
Candidatus Levybacteria bacterium RIFCSPLOWO2_12_FULL_41_12	1798638	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.853027	40.1	-	MFPL01	12	944	875	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315908	GCA_001784155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/155/GCA_001784155.1_ASM178415v1	27774985	-
Candidatus Lindowbacteria bacterium RIFCSPLOWO2_12_FULL_62_27	1817870	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	4.38826	61.3	-	MFPR01	44	3522	3391	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315822	GCA_001784175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/175/GCA_001784175.1_ASM178417v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFCSPHIGHO2_01_FULL_47_8	1798673	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.753376	46.2	-	MFPU01	86	861	602	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314907	GCA_001784195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/195/GCA_001784195.1_ASM178419v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFCSPHIGHO2_02_FULL_41_13	1798676	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.658351	40.7	-	MFPX01	30	652	585	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315343	GCA_001784205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/205/GCA_001784205.1_ASM178420v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFCSPHIGHO2_02_FULL_44_13	1798678	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.927388	43.2	-	MFPZ01	37	923	796	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315427	GCA_001784235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/235/GCA_001784235.1_ASM178423v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFCSPHIGHO2_02_FULL_45_10	1798679	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.712692	44.3	-	MFQA01	51	778	623	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315506	GCA_001784255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/255/GCA_001784255.1_ASM178425v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFCSPHIGHO2_02_FULL_47_14	1798680	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.870492	47	-	MFQB01	58	906	733	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316154	GCA_001784275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/275/GCA_001784275.1_ASM178427v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFCSPHIGHO2_02_FULL_48_18	1798681	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.1009	46.8	-	MFQC01	12	1049	982	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315363	GCA_001784285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/285/GCA_001784285.1_ASM178428v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFCSPLOWO2_01_FULL_40_15	1798686	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.992078	40.6	-	MFQH01	25	963	892	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315136	GCA_001784325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/325/GCA_001784325.1_ASM178432v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFCSPLOWO2_12_FULL_34_7	1798691	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.958676	33	-	MFQM01	58	978	868	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315781	GCA_001784315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/315/GCA_001784315.1_ASM178431v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFOXYA1_FULL_40_8	1798694	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.786881	39.7	-	MFQP01	67	810	626	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314327	GCA_001784355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/355/GCA_001784355.1_ASM178435v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFOXYB1_FULL_40_15	1798697	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.961551	40.4	-	MFQS01	54	946	805	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314494	GCA_001784365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/365/GCA_001784365.1_ASM178436v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFOXYB2_FULL_40_13	1798699	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.829198	40.3	-	MFQU01	67	834	721	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314422	GCA_001784395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/395/GCA_001784395.1_ASM178439v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFOXYC12_FULL_33_11	1798701	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.782447	33.2	-	MFQW01	61	762	672	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314614	GCA_001784405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/405/GCA_001784405.1_ASM178440v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFOXYC2_FULL_42_28	1798704	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.14663	41.9	-	MFQZ01	10	1132	1067	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316181	GCA_001784435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/435/GCA_001784435.1_ASM178443v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFOXYD2_FULL_36_9	1798707	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.708199	34.8	-	MFRC01	66	759	471	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314658	GCA_001784455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/455/GCA_001784455.1_ASM178445v1	27774985	-
Candidatus Magasanikbacteria bacterium RIFOXYD2_FULL_41_14	1798709	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.09513	40.6	-	MFRE01	28	1051	949	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314659	GCA_001784475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/475/GCA_001784475.1_ASM178447v1	27774985	-
Candidatus Margulisbacteria bacterium GWE2_39_32	1817872	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	2.99607	38.6	-	MFRG01	86	2597	2511	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313862	GCA_001784485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/485/GCA_001784485.1_ASM178448v1	27774985	-
Candidatus Margulisbacteria bacterium GWF2_38_17	1821775	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	3.05376	38.6	-	MFRI01	99	2637	2534	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313863	GCA_001784515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/515/GCA_001784515.1_ASM178451v1	27774985	-
Candidatus Melainabacteria bacterium GWA2_34_9	1801604	PRJNA288027	288027	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.0864	33	-	MFRJ01	135	2100	1714	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314160	GCA_001784535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/535/GCA_001784535.1_ASM178453v1	27774985	-
Candidatus Melainabacteria bacterium RIFCSPHIGHO2_02_FULL_34_12	1801607	PRJNA288027	288027	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.10981	34	-	MFRM01	26	2006	1898	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315321	GCA_001784555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/555/GCA_001784555.1_ASM178455v1	27774985	-
Candidatus Melainabacteria bacterium GWF2_37_15	1801606	PRJNA288027	288027	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.26581	36.9	-	MFRL01	102	2424	2319	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313946	GCA_001784565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/565/GCA_001784565.1_ASM178456v1	27774985	-
Candidatus Melainabacteria bacterium RIFCSPLOWO2_02_FULL_35_15	1801608	PRJNA288027	288027	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.9421	34.7	-	MFRN01	45	1852	1759	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316056	GCA_001784585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/585/GCA_001784585.1_ASM178458v1	27774985	-
Candidatus Melainabacteria bacterium RIFOXYA2_FULL_32_9	1801611	PRJNA288027	288027	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.45649	32	-	MFRQ01	171	2236	2045	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314376	GCA_001784615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/615/GCA_001784615.1_ASM178461v1	27774985	-
Candidatus Micrarchaeota archaeon RBG_16_49_10	1801633	PRJNA288027	288027	DPANN group	Candidatus Micrarchaeota	0.916337	47.3	-	MFRS01	26	1153	992	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316252	GCA_001784635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/635/GCA_001784635.1_ASM178463v1	27774985	-
Candidatus Moranbacteria bacterium RBG_19FT_COMBO_42_6	1801636	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.464797	41.4	-	MFRU01	55	591	366	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314073	GCA_001784645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/645/GCA_001784645.1_ASM178464v1	27774985	-
Candidatus Moranbacteria bacterium RBG_13_45_13	1801635	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.16209	44.1	-	MFRT01	40	1240	1027	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316164	GCA_001784675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/675/GCA_001784675.1_ASM178467v1	27774985	-
Candidatus Moranbacteria bacterium RIFCSPHIGHO2_01_FULL_54_31	1801637	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.724422	53.7	-	MFRV01	36	736	667	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315031	GCA_001784695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/695/GCA_001784695.1_ASM178469v1	27774985	-
Candidatus Moranbacteria bacterium RIFCSPHIGHO2_02_FULL_40_12b	1801639	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.940613	39.7	-	MFRX01	46	1050	916	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316151	GCA_001784725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/725/GCA_001784725.1_ASM178472v1	27774985	-
Candidatus Moranbacteria bacterium RIFCSPHIGHO2_12_FULL_54_9	1801641	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.60815	53.6	-	MFRZ01	55	676	500	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315590	GCA_001784715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/715/GCA_001784715.1_ASM178471v1	27774985	-
Candidatus Moranbacteria bacterium RIFCSPLOWO2_12_FULL_48_12	1801643	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.99063	47.8	-	MFSB01	55	1026	918	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315797	GCA_001784735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/735/GCA_001784735.1_ASM178473v1	27774985	-
Candidatus Moranbacteria bacterium RIFOXYA1_FULL_44_7	1801644	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.899105	43.3	-	MFSC01	70	1006	792	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314305	GCA_001784775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/775/GCA_001784775.1_ASM178477v1	27774985	-
Candidatus Moranbacteria bacterium RIFOXYA1_FULL_44_8	1801645	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.879548	43.1	-	MFSD01	75	1017	828	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314315	GCA_001784795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/795/GCA_001784795.1_ASM178479v1	27774985	-
Candidatus Moranbacteria bacterium RIFOXYA12_FULL_35_19	1801646	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.9887	35	-	MFSE01	32	1031	967	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314392	GCA_001784805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/805/GCA_001784805.1_ASM178480v1	27774985	-
Candidatus Moranbacteria bacterium RIFOXYA12_FULL_44_15	1801647	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.758527	43.5	-	MFSF01	44	791	710	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314409	GCA_001784815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/815/GCA_001784815.1_ASM178481v1	27774985	-
Candidatus Moranbacteria bacterium RIFOXYA2_FULL_43_15	1801648	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.02019	42.9	-	MFSG01	54	1065	971	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314380	GCA_001784835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/835/GCA_001784835.1_ASM178483v1	27774985	-
Candidatus Moranbacteria bacterium RIFOXYB1_FULL_43_19	1801649	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.00525	44	-	MFSH01	23	1038	975	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314480	GCA_001784875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/875/GCA_001784875.1_ASM178487v1	27774985	-
Candidatus Moranbacteria bacterium RIFOXYC1_FULL_44_13	1801652	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.08118	43.7	-	MFSK01	33	1145	1055	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314541	GCA_001784885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/885/GCA_001784885.1_ASM178488v1	27774985	-
Candidatus Moranbacteria bacterium RIFOXYB1_FULL_44_23	1801650	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.11768	43.8	-	MFSI01	19	1197	1103	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314495	GCA_001784895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/895/GCA_001784895.1_ASM178489v1	27774985	-
Candidatus Moranbacteria bacterium RIFOXYB12_FULL_35_8	1801651	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.839149	35	-	MFSJ01	72	920	768	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314464	GCA_001784915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/915/GCA_001784915.1_ASM178491v1	27774985	-
Candidatus Moranbacteria bacterium RIFOXYC1_FULL_44_8	1801653	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.991447	43.6	-	MFSL01	60	1080	907	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314528	GCA_001784955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/955/GCA_001784955.1_ASM178495v1	27774985	-
Candidatus Moranbacteria bacterium RIFOXYC12_FULL_36_13	1801654	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.839866	35.1	-	MFSM01	26	867	819	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314610	GCA_001784965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/965/GCA_001784965.1_ASM178496v1	27774985	-
Candidatus Moranbacteria bacterium RIFOXYD1_FULL_44_12	1801655	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.04538	43.5	-	MFSN01	40	1123	985	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314765	GCA_001784975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/784/975/GCA_001784975.1_ASM178497v1	27774985	-
Candidatus Moranbacteria bacterium RIFOXYD1_FULL_44_9	1801656	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.01747	43.4	-	MFSO01	69	1137	935	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314746	GCA_001785005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/005/GCA_001785005.1_ASM178500v1	27774985	-
Candidatus Muproteobacteria bacterium RBG_16_62_13	1817756	PRJNA288027	288027	Proteobacteria	Candidatus Muproteobacteria	2.04953	61.4	-	MFSQ01	152	2151	1541	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314261	GCA_001785045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/045/GCA_001785045.1_ASM178504v1	27774985	-
Candidatus Muproteobacteria bacterium RBG_16_60_9	1817755	PRJNA288027	288027	Proteobacteria	Candidatus Muproteobacteria	3.08411	59	-	MFSP01	205	3163	2277	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313739	GCA_001785035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/035/GCA_001785035.1_ASM178503v1	27774985	-
Candidatus Muproteobacteria bacterium RBG_16_64_10	1817757	PRJNA288027	288027	Proteobacteria	Candidatus Muproteobacteria	1.28363	61.7	-	MFSR01	112	1437	836	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313712	GCA_001785085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/085/GCA_001785085.1_ASM178508v1	27774985	-
Candidatus Muproteobacteria bacterium RBG_16_65_31	1817759	PRJNA288027	288027	Proteobacteria	Candidatus Muproteobacteria	1.49649	65.4	-	MFST01	170	1406	1227	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313713	GCA_001785055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/055/GCA_001785055.1_ASM178505v1	27774985	-
Candidatus Muproteobacteria bacterium RBG_16_65_34	1817760	PRJNA288027	288027	Proteobacteria	Candidatus Muproteobacteria	2.03354	64.8	-	MFSU01	109	1970	1828	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314272	GCA_001785115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/115/GCA_001785115.1_ASM178511v1	27774985	-
Candidatus Muproteobacteria bacterium RIFCSPHIGHO2_01_FULL_61_200	1817763	PRJNA288027	288027	Proteobacteria	Candidatus Muproteobacteria	1.34528	60.6	-	MFSX01	183	1422	1233	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314962	GCA_001785125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/125/GCA_001785125.1_ASM178512v1	27774985	-
Candidatus Muproteobacteria bacterium RIFCSPHIGHO2_02_FULL_60_13	1817765	PRJNA288027	288027	Proteobacteria	Candidatus Muproteobacteria	1.69509	60	-	MFSZ01	149	1786	1445	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315485	GCA_001785155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/155/GCA_001785155.1_ASM178515v1	27774985	-
Candidatus Muproteobacteria bacterium RIFCSPHIGHO2_01_FULL_65_16	1817764	PRJNA288027	288027	Proteobacteria	Candidatus Muproteobacteria	1.7052	65.1	-	MFSY01	135	1636	1432	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314790	GCA_001785175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/175/GCA_001785175.1_ASM178517v1	27774985	-
Candidatus Muproteobacteria bacterium RIFCSPLOWO2_01_FULL_60_18	1817768	PRJNA288027	288027	Proteobacteria	Candidatus Muproteobacteria	2.11199	60.1	-	MFTC01	100	2111	1880	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315240	GCA_001785205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/205/GCA_001785205.1_ASM178520v1	27774985	-
Candidatus Muproteobacteria bacterium RIFCSPHIGHO2_12_FULL_60_33	1817767	PRJNA288027	288027	Proteobacteria	Candidatus Muproteobacteria	1.85728	60.5	-	MFTB01	116	1866	1731	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315609	GCA_001785195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/195/GCA_001785195.1_ASM178519v1	27774985	-
Candidatus Nomurabacteria bacterium RBG_16_40_11	1801728	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.759383	40.5	-	MFTE01	34	858	774	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313733	GCA_001785215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/215/GCA_001785215.1_ASM178521v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_37_110	1801730	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.495145	37.1	-	MFTG01	29	531	472	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314880	GCA_001785255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/255/GCA_001785255.1_ASM178525v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_39_220	1801734	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.752752	40.6	-	MFTK01	36	842	780	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314796	GCA_001785275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/275/GCA_001785275.1_ASM178527v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_40_10	1801736	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.483609	40.1	-	MFTM01	38	570	477	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314885	GCA_001785285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/285/GCA_001785285.1_ASM178528v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_40_12	1801737	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.511728	40.1	-	MFTN01	29	562	477	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314971	GCA_001785295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/295/GCA_001785295.1_ASM178529v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_40_24b	1801739	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.945266	39.7	-	MFTP01	26	1067	997	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314800	GCA_001785325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/325/GCA_001785325.1_ASM178532v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_41_71	1801740	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.634259	41.2	-	MFTQ01	22	689	634	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314890	GCA_001785355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/355/GCA_001785355.1_ASM178535v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_41_91	1801741	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.581483	41	-	MFTR01	31	630	571	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314976	GCA_001785365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/365/GCA_001785365.1_ASM178536v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_42_15	1801742	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.741541	40.7	-	MFTS01	10	800	742	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314891	GCA_001785375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/375/GCA_001785375.1_ASM178537v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_42_16	1801743	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.707353	42	-	MFTT01	36	768	690	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314977	GCA_001785415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/415/GCA_001785415.1_ASM178541v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_43_16	1801744	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.506388	42.9	-	MFTU01	33	570	502	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314893	GCA_001785435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/435/GCA_001785435.1_ASM178543v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_02_40_30	1801745	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.713856	39.3	-	MFTV01	16	787	726	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313771	GCA_001785445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/445/GCA_001785445.1_ASM178544v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_02_FULL_33_12	1801747	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.590999	32.6	-	MFTX01	36	675	587	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315410	GCA_001785485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/485/GCA_001785485.1_ASM178548v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_02_41_18	1801746	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.774829	40.5	-	MFTW01	37	862	806	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313777	GCA_001785465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/465/GCA_001785465.1_ASM178546v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_02_FULL_35_13	1801748	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.55388	34.8	-	MFTY01	28	612	535	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315337	GCA_001785515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/515/GCA_001785515.1_ASM178551v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_02_FULL_37_13	1801750	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.592831	36.3	-	MFUA01	23	685	606	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315338	GCA_001785525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/525/GCA_001785525.1_ASM178552v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_02_FULL_37_45	1801751	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.474981	37	-	MFUB01	23	508	467	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315413	GCA_001785545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/545/GCA_001785545.1_ASM178554v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_02_FULL_38_15	1801752	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.443909	37.8	-	MFUC01	27	517	460	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316149	GCA_001785575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/575/GCA_001785575.1_ASM178557v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_02_FULL_41_18	1801754	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.633787	41.3	-	MFUE01	20	688	625	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315495	GCA_001785595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/595/GCA_001785595.1_ASM178559v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_02_FULL_41_52	1801755	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.58046	40.6	-	MFUF01	20	646	587	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315496	GCA_001785625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/625/GCA_001785625.1_ASM178562v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_02_FULL_42_19	1801756	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.613937	41.8	-	MFUG01	18	710	655	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315420	GCA_001785615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/615/GCA_001785615.1_ASM178561v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_02_FULL_42_24	1801757	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.457684	41.7	-	MFUH01	45	527	460	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315346	GCA_001785635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/635/GCA_001785635.1_ASM178563v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_12_FULL_37_29	1801759	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.629603	37.3	-	MFUJ01	39	695	618	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315671	GCA_001785675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/675/GCA_001785675.1_ASM178567v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_12_FULL_40_64	1801760	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.753014	40.7	-	MFUK01	35	832	782	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315556	GCA_001785695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/695/GCA_001785695.1_ASM178569v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_36_10b	1801766	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.502258	36.4	-	MFUQ01	21	519	436	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315150	GCA_001785725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/725/GCA_001785725.1_ASM178572v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_36_16	1801767	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.720971	36.2	-	MFUR01	14	769	718	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315244	GCA_001785715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/715/GCA_001785715.1_ASM178571v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_33_24	1801765	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.398135	32.9	-	MFUP01	16	419	372	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315148	GCA_001785735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/735/GCA_001785735.1_ASM178573v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_37_25	1801768	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.588342	36.5	-	MFUS01	21	684	624	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315059	GCA_001785775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/775/GCA_001785775.1_ASM178577v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_39_17	1801770	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.486472	39	-	MFUU01	24	530	471	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315154	GCA_001785805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/805/GCA_001785805.1_ASM178580v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_37_49	1801769	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.557218	37.2	-	MFUT01	30	593	536	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315245	GCA_001785785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/785/GCA_001785785.1_ASM178578v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_40_15	1801772	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.487362	39.4	-	MFUW01	33	563	472	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315064	GCA_001785815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/815/GCA_001785815.1_ASM178581v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_40_18	1801773	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.716431	40.1	-	MFUX01	44	812	750	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315156	GCA_001785855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/855/GCA_001785855.1_ASM178585v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_41_18	1801775	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.749714	40.7	-	MFUZ01	9	803	746	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315252	GCA_001785865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/865/GCA_001785865.1_ASM178586v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_41_21	1801776	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.546756	40.7	-	MFVA01	20	620	568	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315067	GCA_001785875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/875/GCA_001785875.1_ASM178587v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_41_220	1801777	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.736887	40.7	-	MFVB01	39	825	762	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315159	GCA_001785895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/895/GCA_001785895.1_ASM178589v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_41_52b	1801779	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.648264	41.2	-	MFVD01	22	709	656	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315254	GCA_001785935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/935/GCA_001785935.1_ASM178593v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_43_15	1801782	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.57337	42.6	-	MFVG01	30	664	574	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315164	GCA_001785955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/955/GCA_001785955.1_ASM178595v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_42_20	1801781	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.697429	42.1	-	MFVF01	35	762	668	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315162	GCA_001785965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/965/GCA_001785965.1_ASM178596v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_42_17	1801780	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.669556	40.6	-	MFVE01	9	753	695	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315070	GCA_001785985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/785/985/GCA_001785985.1_ASM178598v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_46_18	1801783	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.45364	45.9	-	MFVH01	29	529	437	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315086	GCA_001786015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/015/GCA_001786015.1_ASM178601v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_02_FULL_36_8	1801785	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.590809	35.7	-	MFVJ01	43	684	535	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316072	GCA_001786035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/035/GCA_001786035.1_ASM178603v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_02_FULL_40_67	1801787	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.757441	40.5	-	MFVL01	35	831	780	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316011	GCA_001786045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/045/GCA_001786045.1_ASM178604v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_02_FULL_41_9	1801788	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.561746	40.9	-	MFVM01	43	633	506	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316078	GCA_001786055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/055/GCA_001786055.1_ASM178605v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_02_FULL_42_17	1801789	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.509331	41.6	-	MFVN01	46	571	479	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316013	GCA_001786095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/095/GCA_001786095.1_ASM178609v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_02_FULL_42_24	1801790	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.654778	41.1	-	MFVO01	28	726	656	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315944	GCA_001786115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/115/GCA_001786115.1_ASM178611v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_02_FULL_44_12	1801791	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.630629	43.9	-	MFVP01	32	724	638	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316083	GCA_001786125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/125/GCA_001786125.1_ASM178612v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_12_40_14	1801792	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.748481	39.5	-	MFVQ01	19	812	746	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313799	GCA_001786145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/145/GCA_001786145.1_ASM178614v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_12_FULL_37_8	1801793	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.499456	37	-	MFVR01	35	546	484	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315886	GCA_001786175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/175/GCA_001786175.1_ASM178617v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_12_FULL_40_42	1801794	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.767545	40.5	-	MFVS01	32	847	800	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315836	GCA_001786195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/195/GCA_001786195.1_ASM178619v1	27774985	-
Candidatus Nomurabacteria bacterium RIFOXYA2_FULL_42_12	1801801	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.640263	43.2	-	MFVZ01	20	708	646	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314346	GCA_001786215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/215/GCA_001786215.1_ASM178621v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_12_FULL_46_14	1801797	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.525811	46.1	-	MFVV01	45	591	494	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315794	GCA_001786225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/225/GCA_001786225.1_ASM178622v1	27774985	-
Candidatus Nomurabacteria bacterium RIFOXYB1_FULL_36_10	1801802	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.749402	35.9	-	MFWA01	43	800	682	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314508	GCA_001786255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/255/GCA_001786255.1_ASM178625v1	27774985	-
Candidatus Nomurabacteria bacterium RIFOXYB1_FULL_43_14	1801804	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.625299	42.8	-	MFWC01	16	701	614	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314478	GCA_001786275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/275/GCA_001786275.1_ASM178627v1	27774985	-
Candidatus Nomurabacteria bacterium RIFOXYC2_FULL_36_19	1801806	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.678089	35.5	-	MFWE01	31	751	683	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314577	GCA_001786295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/295/GCA_001786295.1_ASM178629v1	27774985	-
Candidatus Nomurabacteria bacterium RIFOXYC2_FULL_43_16	1801808	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.621377	42.9	-	MFWG01	12	683	621	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314564	GCA_001786315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/315/GCA_001786315.1_ASM178631v1	27774985	-
Candidatus Nomurabacteria bacterium RIFOXYC2_FULL_36_8	1801807	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.592858	35.8	-	MFWF01	58	664	494	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314588	GCA_001786325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/325/GCA_001786325.1_ASM178632v1	27774985	-
Candidatus Nomurabacteria bacterium RIFOXYD2_FULL_35_12	1801812	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.686311	35.4	-	MFWK01	30	763	678	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314707	GCA_001786365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/365/GCA_001786365.1_ASM178636v1	27774985	-
Candidatus Nomurabacteria bacterium RIFOXYD1_FULL_36_19	1801809	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.719911	36	-	MFWH01	34	765	660	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314718	GCA_001786355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/355/GCA_001786355.1_ASM178635v1	27774985	-
Candidatus Pacearchaeota archaeon RBG_16_35_8	1801882	PRJNA288027	288027	DPANN group	Candidatus Pacearchaeota	0.453623	34.1	-	MFWO01	36	594	415	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316251	GCA_001786425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/425/GCA_001786425.1_ASM178642v1	27774985	-
Candidatus Nomurabacteria bacterium RIFOXYD2_FULL_42_12	1801813	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.582825	42.8	-	MFWL01	28	657	562	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314706	GCA_001786405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/405/GCA_001786405.1_ASM178640v1	27774985	-
Candidatus Pacearchaeota archaeon RBG_19FT_COMBO_34_9	1801883	PRJNA288027	288027	DPANN group	Candidatus Pacearchaeota	0.599775	33.2	-	MFWP01	15	760	645	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316271	GCA_001786415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/415/GCA_001786415.1_ASM178641v1	27774985	-
Candidatus Pacearchaeota archaeon RBG_13_36_9	1801881	PRJNA288027	288027	DPANN group	Candidatus Pacearchaeota	1.59169	35.1	-	MFWN01	95	1895	1596	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316262	GCA_001786395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/395/GCA_001786395.1_ASM178639v1	27774985	-
Candidatus Pacebacteria bacterium RIFCSPHIGHO2_01_FULL_46_16	1801885	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.610287	45.6	-	MFWR01	9	661	614	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314785	GCA_001786475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/475/GCA_001786475.1_ASM178647v1	27774985	-
Candidatus Pacebacteria bacterium RIFCSPHIGHO2_02_FULL_46_9	1801886	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.715219	46	-	MFWS01	50	866	693	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316148	GCA_001786485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/485/GCA_001786485.1_ASM178648v1	27774985	-
Candidatus Melainabacteria bacterium RIFCSPLOWO2_12_FULL_35_11	1801609	PRJNA288027	288027	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.04864	34.7	-	MFRO01	55	1962	1855	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315768	GCA_001786505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/505/GCA_001786505.1_ASM178650v1	27774985	-
Candidatus Melainabacteria bacterium GWF2_32_7	1801605	PRJNA288027	288027	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.24229	32.2	-	MFRK01	210	2122	1774	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314225	GCA_001786525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/525/GCA_001786525.1_ASM178652v1	27774985	-
Candidatus Melainabacteria bacterium RIFOXYA12_FULL_32_12	1801610	PRJNA288027	288027	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.42982	32.2	-	MFRP01	212	2243	2087	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314408	GCA_001786555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/555/GCA_001786555.1_ASM178655v1	27774985	-
Candidatus Micrarchaeota archaeon RBG_16_36_9	1801632	PRJNA288027	288027	DPANN group	Candidatus Micrarchaeota	0.73023	35.4	-	MFRR01	20	888	791	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316253	GCA_001786585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/585/GCA_001786585.1_ASM178658v1	27774985	-
Candidatus Moranbacteria bacterium RIFCSPHIGHO2_01_FULL_55_24	1801638	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.789426	54.3	-	MFRW01	11	825	764	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314961	GCA_001786575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/575/GCA_001786575.1_ASM178657v1	27774985	-
Candidatus Moranbacteria bacterium RIFCSPHIGHO2_12_FULL_40_10	1801640	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.711513	39.9	-	MFRY01	49	815	660	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315643	GCA_001786615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/615/GCA_001786615.1_ASM178661v1	27774985	-
Candidatus Moranbacteria bacterium RIFCSPLOWO2_02_FULL_48_19	1801642	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.955335	47.9	-	MFSA01	68	969	872	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316094	GCA_001786625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/625/GCA_001786625.1_ASM178662v1	27774985	-
Candidatus Muproteobacteria bacterium RBG_16_64_11	1817758	PRJNA288027	288027	Proteobacteria	Candidatus Muproteobacteria	1.61465	62.8	-	MFSS01	124	1731	1196	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314271	GCA_001786655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/655/GCA_001786655.1_ASM178665v1	27774985	-
Candidatus Muproteobacteria bacterium RBG_19FT_COMBO_61_10	1817761	PRJNA288027	288027	Proteobacteria	Candidatus Muproteobacteria	1.73299	56.9	-	MFSV01	211	1889	868	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313679	GCA_001786665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/665/GCA_001786665.1_ASM178666v1	27774985	-
Candidatus Muproteobacteria bacterium RIFCSPHIGHO2_01_60_12	1817762	PRJNA288027	288027	Proteobacteria	Candidatus Muproteobacteria	1.81416	59.9	-	MFSW01	166	1908	1688	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313763	GCA_001786695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/695/GCA_001786695.1_ASM178669v1	27774985	-
Candidatus Muproteobacteria bacterium RIFCSPHIGHO2_02_FULL_65_16	1817766	PRJNA288027	288027	Proteobacteria	Candidatus Muproteobacteria	1.63699	64.7	-	MFTA01	154	1591	1346	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315334	GCA_001786715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/715/GCA_001786715.1_ASM178671v1	27774985	-
Candidatus Nomurabacteria bacterium GWB1_40_6	1801727	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.539899	39.5	-	MFTD01	49	656	501	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314242	GCA_001786735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/735/GCA_001786735.1_ASM178673v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_36_23	1801729	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.556503	36.4	-	MFTF01	25	648	588	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314793	GCA_001786745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/745/GCA_001786745.1_ASM178674v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_37_25	1801731	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.72625	36.1	-	MFTH01	17	785	730	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314794	GCA_001786765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/765/GCA_001786765.1_ASM178676v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_38_19	1801732	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.621168	38.5	-	MFTI01	32	716	647	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314967	GCA_001786795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/795/GCA_001786795.1_ASM178679v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_39_10	1801733	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.869879	39.4	-	MFTJ01	65	1043	901	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314795	GCA_001786805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/805/GCA_001786805.1_ASM178680v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_39_9	1801735	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.40781	38.6	-	MFTL01	28	460	351	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314798	GCA_001786825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/825/GCA_001786825.1_ASM178682v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_40_20	1801738	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.550711	40.2	-	MFTO01	21	645	588	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314886	GCA_001786835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/835/GCA_001786835.1_ASM178683v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_02_FULL_36_29	1801749	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.752275	36.2	-	MFTZ01	16	812	758	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315489	GCA_001786875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/875/GCA_001786875.1_ASM178687v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_02_FULL_41_150	1801753	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.695207	40.7	-	MFUD01	28	779	737	10/19/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04315418	GCA_001786885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/885/GCA_001786885.1_ASM178688v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_12_40_11	1801758	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.661065	39	-	MFUI01	34	757	681	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313764	GCA_001786905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/905/GCA_001786905.1_ASM178690v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_12_FULL_40_77	1801761	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.646365	39.5	-	MFUL01	40	706	645	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315585	GCA_001786925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/925/GCA_001786925.1_ASM178692v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_12_FULL_42_19	1801762	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.656088	41.2	-	MFUM01	11	718	654	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315737	GCA_001786955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/955/GCA_001786955.1_ASM178695v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_12_FULL_44_22b	1801763	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.584524	44.1	-	MFUN01	36	655	597	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315647	GCA_001786965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/965/GCA_001786965.1_ASM178696v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_33_17	1801764	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.557613	32.6	-	MFUO01	37	626	565	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315056	GCA_001786995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/786/995/GCA_001786995.1_ASM178699v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_39_18	1801771	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.813402	39.6	-	MFUV01	13	902	841	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315248	GCA_001787005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/005/GCA_001787005.1_ASM178700v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_41_12	1801774	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.665914	40.5	-	MFUY01	31	749	641	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315158	GCA_001787035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/035/GCA_001787035.1_ASM178703v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_41_52	1801778	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.599965	40.9	-	MFVC01	24	654	593	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315160	GCA_001787055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/055/GCA_001787055.1_ASM178705v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_02_40_28	1801784	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.71351	39.3	-	MFVI01	12	764	712	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313788	GCA_001787075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/075/GCA_001787075.1_ASM178707v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_02_FULL_40_10	1801786	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.865116	39.9	-	MFVK01	42	979	821	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315941	GCA_001787085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/085/GCA_001787085.1_ASM178708v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_12_FULL_41_10	1801795	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.670401	41	-	MFVT01	28	759	665	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315785	GCA_001787115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/115/GCA_001787115.1_ASM178711v1	27774985	-
Candidatus Nomurabacteria bacterium RIFCSPLOWO2_12_FULL_44_11	1801796	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.644665	44.1	-	MFVU01	36	754	672	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315841	GCA_001787125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/125/GCA_001787125.1_ASM178712v1	27774985	-
Candidatus Nomurabacteria bacterium RIFOXYA1_FULL_35_17	1801798	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.524626	35.4	-	MFVW01	39	586	533	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314313	GCA_001787155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/155/GCA_001787155.1_ASM178715v1	27774985	-
Candidatus Nomurabacteria bacterium RIFOXYA1_FULL_42_12	1801799	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.609633	43	-	MFVX01	17	677	610	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314304	GCA_001787165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/165/GCA_001787165.1_ASM178716v1	27774985	-
Candidatus Nomurabacteria bacterium RIFOXYB1_FULL_39_16	1801803	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.762513	38.9	-	MFWB01	18	829	745	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314477	GCA_001787205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/205/GCA_001787205.1_ASM178720v1	27774985	-
Candidatus Nomurabacteria bacterium RIFOXYA2_FULL_35_9	1801800	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.612353	35.1	-	MFVY01	47	706	603	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314359	GCA_001787195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/195/GCA_001787195.1_ASM178719v1	27774985	-
Candidatus Nomurabacteria bacterium RIFOXYC1_FULL_43_8	1801805	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.481266	42.6	-	MFWD01	41	570	462	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314553	GCA_001787235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/235/GCA_001787235.1_ASM178723v1	27774985	-
Candidatus Nomurabacteria bacterium RIFOXYD1_FULL_39_12	1801810	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.733573	38.8	-	MFWI01	32	822	696	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314738	GCA_001787245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/245/GCA_001787245.1_ASM178724v1	27774985	-
Candidatus Nomurabacteria bacterium RIFOXYD1_FULL_42_14	1801811	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.632865	43	-	MFWJ01	18	697	623	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314740	GCA_001787275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/275/GCA_001787275.1_ASM178727v1	27774985	-
Candidatus Pacearchaeota archaeon RBG_13_33_26	1801880	PRJNA288027	288027	DPANN group	Candidatus Pacearchaeota	0.579469	33.4	-	MFWM01	11	715	677	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316263	GCA_001787285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/285/GCA_001787285.1_ASM178728v1	27774985	-
Candidatus Pacebacteria bacterium RIFCSPHIGHO2_01_FULL_46_10	1801884	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.610744	45.4	-	MFWQ01	40	728	599	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314957	GCA_001787315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/315/GCA_001787315.1_ASM178731v1	27774985	-
Candidatus Pacebacteria bacterium RIFOXYC1_FULL_39_21	1801891	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.815532	38.5	-	MFWY01	11	850	793	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314532	GCA_001787375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/375/GCA_001787375.1_ASM178737v1	27774985	-
Candidatus Pacebacteria bacterium RIFOXYD1_FULL_39_27	1801892	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.787698	38.8	-	MFWZ01	10	816	767	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314735	GCA_001787395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/395/GCA_001787395.1_ASM178739v1	27774985	-
Candidatus Pacebacteria bacterium RIFOXYA1_FULL_38_18	1801888	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.831884	38.5	-	MFWV01	13	871	809	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314303	GCA_001787405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/405/GCA_001787405.1_ASM178740v1	27774985	-
Candidatus Pacebacteria bacterium RIFCSPLOWO2_01_FULL_47_12	1801887	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.718227	46.7	-	MFWU01	18	808	712	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315235	GCA_001787385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/385/GCA_001787385.1_ASM178738v1	27774985	-
Candidatus Peregrinibacteria bacterium RIFOXYB2_FULL_32_7	1801906	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.11111	31.2	-	MFXJ01	116	1027	850	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314456	GCA_001787465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/465/GCA_001787465.1_ASM178746v1	27774985	-
Candidatus Peregrinibacteria bacterium RIFCSPLOWO2_01_FULL_39_12	1801897	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.863781	38.6	-	MFXA01	64	852	696	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315313	GCA_001787455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/455/GCA_001787455.1_ASM178745v1	27774985	-
Candidatus Peregrinibacteria bacterium RIFCSPLOWO2_01_FULL_48_20	1801898	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.72629	47.9	-	MFXB01	77	761	631	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315127	GCA_001787475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/475/GCA_001787475.1_ASM178747v1	27774985	-
Candidatus Peribacteria bacterium RIFCSPHIGHO2_01_FULL_49_38	1801913	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.965183	47.7	-	MFXO01	28	973	901	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315033	GCA_001787485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/485/GCA_001787485.1_ASM178748v1	27774985	-
Candidatus Peribacteria bacterium RIFCSPHIGHO2_01_FULL_51_35	1801914	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.19644	51.6	-	MFXP01	18	1223	1154	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314859	GCA_001787535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/535/GCA_001787535.1_ASM178753v1	27774985	-
Candidatus Peribacteria bacterium RIFCSPHIGHO2_02_FULL_52_16	1801920	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.968079	51.6	-	MFXV01	17	962	901	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315541	GCA_001787565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/565/GCA_001787565.1_ASM178756v1	27774985	-
Candidatus Peribacteria bacterium RIFCSPHIGHO2_01_FULL_51_9	1801915	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.066	50.5	-	MFXQ01	86	1155	931	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314788	GCA_001787555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/555/GCA_001787555.1_ASM178755v1	27774985	-
Candidatus Peribacteria bacterium RIFCSPHIGHO2_02_FULL_53_20	1801921	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.12686	52.5	-	MFXW01	81	1130	1015	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315390	GCA_001787585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/585/GCA_001787585.1_ASM178758v1	27774985	-
Candidatus Peribacteria bacterium RIFCSPHIGHO2_02_FULL_55_24	1801922	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.887802	54.5	-	MFXX01	28	909	843	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315465	GCA_001787615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/615/GCA_001787615.1_ASM178761v1	27774985	-
Candidatus Peribacteria bacterium RIFCSPHIGHO2_12_FULL_54_10	1801923	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.757838	54.1	-	MFXY01	54	811	657	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315599	GCA_001787625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/625/GCA_001787625.1_ASM178762v1	27774985	-
Candidatus Peribacteria bacterium RIFCSPLOWO2_01_FULL_51_18	1801925	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.2596	50.9	-	MFYA01	48	1152	1063	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315220	GCA_001787635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/635/GCA_001787635.1_ASM178763v1	27774985	-
Candidatus Peribacteria bacterium RIFCSPLOWO2_01_FULL_53_10	1801926	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.0129	52.3	-	MFYB01	83	1104	838	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315314	GCA_001787675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/675/GCA_001787675.1_ASM178767v1	27774985	-
Candidatus Peribacteria bacterium RIFCSPLOWO2_02_FULL_51_10	1801928	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.12632	51	-	MFYD01	81	1059	867	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316122	GCA_001787695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/695/GCA_001787695.1_ASM178769v1	27774985	-
Candidatus Peribacteria bacterium RIFCSPLOWO2_12_FULL_53_10	1801930	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.14782	52.6	-	MFYF01	81	1189	1041	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315857	GCA_001787705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/705/GCA_001787705.1_ASM178770v1	27774985	-
Candidatus Peribacteria bacterium RIFOXYA1_FULL_56_14	1801932	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.48576	54.6	-	MFYH01	35	1368	1284	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314319	GCA_001787725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/725/GCA_001787725.1_ASM178772v1	27774985	-
Candidatus Peribacteria bacterium RIFOXYB1_FULL_54_35	1801934	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.56223	54.5	-	MFYJ01	16	1406	1344	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314505	GCA_001787755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/755/GCA_001787755.1_ASM178775v1	27774985	-
Candidatus Peribacteria bacterium RIFOXYB1_FULL_57_12	1801935	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.19871	58.3	-	MFYK01	23	1134	987	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314519	GCA_001787775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/775/GCA_001787775.1_ASM178777v1	27774985	-
Candidatus Peribacteria bacterium RIFOXYC1_FULL_54_13	1801937	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.5616	54.4	-	MFYM01	25	1435	1324	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314545	GCA_001787795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/795/GCA_001787795.1_ASM178779v1	27774985	-
Candidatus Peribacteria bacterium RIFOXYC2_FULL_58_10	1801940	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.24123	57.5	-	MFYP01	48	1189	931	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316179	GCA_001787805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/805/GCA_001787805.1_ASM178780v1	27774985	-
Candidatus Raymondbacteria bacterium RIFOXYC2_FULL_50_21	1817889	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	3.41419	49.8	-	MFYW01	61	2828	2736	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314574	GCA_001787835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/835/GCA_001787835.1_ASM178783v1	27774985	-
Candidatus Riflebacteria bacterium RBG_13_59_9	1817875	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.31818	55.2	-	MFYZ01	140	1398	706	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313984	GCA_001787865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/865/GCA_001787865.1_ASM178786v1	27774985	-
Candidatus Riflebacteria bacterium GWC2_50_8	1817874	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	4.38609	49.2	-	MFYY01	279	3925	3065	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313801	GCA_001787855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/855/GCA_001787855.1_ASM178785v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_01_FULL_37_16b	1802027	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.13613	36.2	-	MFZC01	63	1209	1080	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315012	GCA_001787885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/885/GCA_001787885.1_ASM178788v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_01_FULL_38_41	1802029	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.978947	37.6	-	MFZE01	56	1005	917	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315015	GCA_001787915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/915/GCA_001787915.1_ASM178791v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_01_FULL_39_12c	1802031	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.16455	39	-	MFZG01	43	1217	1110	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314927	GCA_001787935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/935/GCA_001787935.1_ASM178793v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_01_FULL_39_24	1802032	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.87403	39.1	-	MFZH01	49	977	885	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314952	GCA_001787945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/945/GCA_001787945.1_ASM178794v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_01_FULL_40_98	1802034	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.875819	39.9	-	MFZJ01	28	985	914	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314932	GCA_001787965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/965/GCA_001787965.1_ASM178796v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_02_FULL_37_9b	1802038	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.193	36.2	-	MFZN01	73	1424	1203	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315529	GCA_001787985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/985/GCA_001787985.1_ASM178798v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_02_FULL_38_11	1802039	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.23817	37.2	-	MFZO01	51	1331	1208	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315378	GCA_001788015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/015/GCA_001788015.1_ASM178801v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_12_FULL_33_9	1802045	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.869865	32.9	-	MFZV01	59	984	763	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315681	GCA_001788045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/045/GCA_001788045.1_ASM178804v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_02_FULL_39_9	1802040	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.16798	38.8	-	MFZP01	72	1321	1086	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315381	GCA_001788035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/035/GCA_001788035.1_ASM178803v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_12_FULL_36_11	1802046	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.22253	35.9	-	MFZW01	67	1349	1141	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315745	GCA_001788055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/055/GCA_001788055.1_ASM178805v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_12_FULL_37_23	1802047	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.09331	37.6	-	MFZX01	45	1135	1043	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315563	GCA_001788095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/095/GCA_001788095.1_ASM178809v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_12_FULL_39_8	1802050	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.900311	38.2	-	MGAA01	82	1042	795	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315748	GCA_001788115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/115/GCA_001788115.1_ASM178811v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_12_FULL_40_130	1802051	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.866826	39.9	-	MGAB01	33	971	900	10/19/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04315621	GCA_001788125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/125/GCA_001788125.1_ASM178812v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_12_FULL_44_10	1802054	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.550404	43	-	MGAE01	57	675	516	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315686	GCA_001788135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/135/GCA_001788135.1_ASM178813v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_38_11	1802060	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.628619	37.7	-	MGAK01	33	709	568	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315110	GCA_001788165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/165/GCA_001788165.1_ASM178816v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_38_12	1802061	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.25856	37.3	-	MGAL01	50	1354	1160	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315246	GCA_001788195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/195/GCA_001788195.1_ASM178819v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_40_14	1802064	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.853359	40.3	-	MGAO01	48	945	843	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315208	GCA_001788215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/215/GCA_001788215.1_ASM178821v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_02_FULL_36_11	1802071	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.22655	36	-	MGAV01	28	1249	1140	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315966	GCA_001788225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/225/GCA_001788225.1_ASM178822v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_02_FULL_43_10	1802078	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.926317	42.2	-	MGBC01	60	1025	784	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316044	GCA_001788235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/235/GCA_001788235.1_ASM178823v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFOXYA2_FULL_41_8	1802084	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.814379	40.3	-	MGBI01	50	945	729	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314383	GCA_001788275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/275/GCA_001788275.1_ASM178827v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFOXYC1_FULL_41_16	1802090	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.900803	40.9	-	MGBO01	22	953	873	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314524	GCA_001788295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/295/GCA_001788295.1_ASM178829v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFOXYC2_FULL_41_10	1802092	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.839692	40.3	-	MGBQ01	55	960	705	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314580	GCA_001788325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/325/GCA_001788325.1_ASM178832v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFOXYC2_FULL_38_9	1802091	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.20296	37.2	-	MGBP01	33	1272	1107	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314567	GCA_001788305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/305/GCA_001788305.1_ASM178830v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFOXYD1_FULL_38_12	1802093	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.21693	37.3	-	MGBR01	1	1225	1178	10/19/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04316241	GCA_001788355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/355/GCA_001788355.1_ASM178835v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFOXYD1_FULL_41_24	1802094	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.850038	40.7	-	MGBS01	18	908	833	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314728	GCA_001788375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/375/GCA_001788375.1_ASM178837v1	27774985	-
Candidatus Rokubacteria bacterium GWA2_70_23	1802095	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	4.65509	69.9	-	MGBT01	243	4714	4329	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313874	GCA_001788395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/395/GCA_001788395.1_ASM178839v1	27774985	-
Candidatus Rokubacteria bacterium GWC2_70_16	1802097	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	4.70321	70.9	-	MGBV01	309	4664	4172	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313873	GCA_001788415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/415/GCA_001788415.1_ASM178841v1	27774985	-
Candidatus Rokubacteria bacterium GWF2_70_14	1802099	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	3.32376	69.3	-	MGBX01	240	3503	2773	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313871	GCA_001788425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/425/GCA_001788425.1_ASM178842v1	27774985	-
Candidatus Rokubacteria bacterium RBG_16_73_20	1802100	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	3.76164	71.9	-	MGBY01	334	3913	3136	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313729	GCA_001788445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/445/GCA_001788445.1_ASM178844v1	27774985	-
Candidatus Rokubacteria bacterium RIFCSPLOWO2_02_FULL_71_18	1802105	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.03713	68.3	-	MGCD01	146	1151	634	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315936	GCA_001788485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/485/GCA_001788485.1_ASM178848v1	27774985	-
Candidatus Rokubacteria bacterium RIFCSPHIGHO2_12_FULL_73_22	1802103	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	3.62299	72.8	-	MGCB01	301	3708	3105	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315583	GCA_001788475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/475/GCA_001788475.1_ASM178847v1	27774985	-
Candidatus Rokubacteria bacterium RIFCSPLOWO2_02_FULL_73_56	1802107	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	4.05234	73.4	-	MGCF01	189	3968	3673	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316002	GCA_001788495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/495/GCA_001788495.1_ASM178849v1	27774985	-
Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_69_21	1802108	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	2.80898	68.1	-	MGCG01	756	3065	2303	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315885	GCA_001788535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/535/GCA_001788535.1_ASM178853v1	27774985	-
Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_12_FULL_49_19	1802145	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.687546	49.1	-	MGCX01	45	779	690	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315601	GCA_001788565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/565/GCA_001788565.1_ASM178856v1	27774985	-
Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_01_FULL_49_21	1802135	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.509429	49.3	-	MGCN01	30	588	527	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314861	GCA_001788555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/555/GCA_001788555.1_ASM178855v1	27774985	-
Candidatus Saccharibacteria bacterium RIFCSPLOWO2_01_FULL_48_13	1802146	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.46943	47.7	-	MGCY01	29	531	442	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315221	GCA_001788605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/605/GCA_001788605.1_ASM178860v1	27774985	-
Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_19	1802109	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	3.48356	70.8	-	MGCH01	377	3563	3053	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316200	GCA_001788595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/595/GCA_001788595.1_ASM178859v1	27774985	-
Candidatus Pacebacteria bacterium RIFOXYB1_FULL_39_46	1801889	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.793759	38.7	-	MFWW01	11	832	776	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314504	GCA_001788645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/645/GCA_001788645.1_ASM178864v1	27774985	-
Candidatus Schekmanbacteria bacterium RBG_16_38_10	1817879	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	2.26516	36	-	MGDE01	265	2356	1629	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313726	GCA_001788635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/635/GCA_001788635.1_ASM178863v1	27774985	-
Candidatus Peregrinibacteria bacterium RIFCSPLOWO2_02_FULL_39_10	1801899	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.837919	38.4	-	MFXC01	66	841	626	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316046	GCA_001788685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/685/GCA_001788685.1_ASM178868v1	27774985	-
Candidatus Pacebacteria bacterium RIFOXYB1_FULL_44_10	1801890	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.850235	43	-	MFWX01	40	906	755	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314499	GCA_001788675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/675/GCA_001788675.1_ASM178867v1	27774985	-
Candidatus Peregrinibacteria bacterium RIFCSPLOWO2_02_FULL_48_14	1801900	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.826567	47.4	-	MFXD01	75	927	703	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316111	GCA_001788715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/715/GCA_001788715.1_ASM178871v1	27774985	-
Candidatus Peregrinibacteria bacterium RIFOXYA12_FULL_33_12	1801901	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.53537	33.2	-	MFXE01	79	1385	1274	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314393	GCA_001788725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/725/GCA_001788725.1_ASM178872v1	27774985	-
Candidatus Peregrinibacteria bacterium RIFOXYA2_FULL_33_21	1801902	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.54373	33.2	-	MFXF01	42	1363	1283	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314384	GCA_001788755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/755/GCA_001788755.1_ASM178875v1	27774985	-
Candidatus Peregrinibacteria bacterium RIFOXYA2_FULL_33_7	1801903	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.21768	32.8	-	MFXG01	121	1137	919	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314350	GCA_001788765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/765/GCA_001788765.1_ASM178876v1	27774985	-
Candidatus Peregrinibacteria bacterium RIFOXYA2_FULL_41_18	1801904	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.23948	41.3	-	MFXH01	20	1179	1097	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314365	GCA_001788795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/795/GCA_001788795.1_ASM178879v1	27774985	-
Candidatus Peregrinibacteria bacterium RIFOXYB12_FULL_41_12	1801905	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.25523	41.2	-	MFXI01	53	1200	1072	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314465	GCA_001788805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/805/GCA_001788805.1_ASM178880v1	27774985	-
Candidatus Peregrinibacteria bacterium RIFOXYB2_FULL_33_20	1801907	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.49981	33.3	-	MFXK01	42	1331	1264	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314428	GCA_001788835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/835/GCA_001788835.1_ASM178883v1	27774985	-
Candidatus Peregrinibacteria bacterium RIFOXYB2_FULL_41_88	1801908	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.05764	41.2	-	MFXL01	268	1081	847	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314457	GCA_001788845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/845/GCA_001788845.1_ASM178884v1	27774985	-
Candidatus Peregrinibacteria bacterium RIFOXYC2_FULL_33_13	1801909	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.08499	32.2	-	MFXM01	319	1092	697	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314604	GCA_001788885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/885/GCA_001788885.1_ASM178888v1	27774985	-
Candidatus Peregrinibacteria bacterium RIFOXYC2_FULL_41_22	1801910	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.02829	41.2	-	MFXN01	84	1018	873	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314569	GCA_001788875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/875/GCA_001788875.1_ASM178887v1	27774985	-
Candidatus Peribacteria bacterium RIFCSPHIGHO2_01_FULL_54_22	1801916	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.855402	54.5	-	MFXR01	29	876	801	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314942	GCA_001788915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/915/GCA_001788915.1_ASM178891v1	27774985	-
Candidatus Peribacteria bacterium RIFCSPHIGHO2_01_FULL_55_13	1801917	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.16648	54.6	-	MFXS01	43	1188	1071	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315034	GCA_001788925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/925/GCA_001788925.1_ASM178892v1	27774985	-
Candidatus Peribacteria bacterium RIFCSPHIGHO2_02_FULL_51_15	1801919	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.18374	51	-	MFXU01	63	1088	992	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315405	GCA_001788965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/965/GCA_001788965.1_ASM178896v1	27774985	-
Candidatus Peribacteria bacterium RIFCSPHIGHO2_02_FULL_49_16	1801918	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.917216	47.8	-	MFXT01	26	932	859	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315464	GCA_001788955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/955/GCA_001788955.1_ASM178895v1	27774985	-
Candidatus Peribacteria bacterium RIFCSPHIGHO2_12_FULL_55_11	1801924	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.11356	54.3	-	MFXZ01	75	1150	944	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315688	GCA_001788995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/788/995/GCA_001788995.1_ASM178899v1	27774985	-
Candidatus Peribacteria bacterium RIFCSPLOWO2_01_FULL_54_110	1801927	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.807	53.9	-	MFYC01	58	848	748	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315100	GCA_001789005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/005/GCA_001789005.1_ASM178900v1	27774985	-
Candidatus Peribacteria bacterium RIFCSPLOWO2_02_FULL_55_36	1801929	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.840026	54.4	-	MFYE01	37	860	788	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315978	GCA_001789035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/035/GCA_001789035.1_ASM178903v1	27774985	-
Candidatus Peribacteria bacterium RIFCSPLOWO2_12_FULL_55_15	1801931	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.89581	54.4	-	MFYG01	24	912	842	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315910	GCA_001789045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/045/GCA_001789045.1_ASM178904v1	27774985	-
Candidatus Peribacteria bacterium RIFOXYA2_FULL_55_28	1801933	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.55702	54.5	-	MFYI01	18	1416	1350	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314338	GCA_001789075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/075/GCA_001789075.1_ASM178907v1	27774985	-
Candidatus Peribacteria bacterium RIFOXYB2_FULL_54_17	1801936	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.57536	54.4	-	MFYL01	18	1421	1352	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314448	GCA_001789085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/085/GCA_001789085.1_ASM178908v1	27774985	-
Candidatus Peribacteria bacterium RIFOXYC1_FULL_58_8	1801938	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.05703	58	-	MFYN01	78	1054	835	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314533	GCA_001789115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/115/GCA_001789115.1_ASM178911v1	27774985	-
Candidatus Peribacteria bacterium RIFOXYC2_FULL_55_14	1801939	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.56126	54.4	-	MFYO01	23	1429	1309	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314575	GCA_001789125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/125/GCA_001789125.1_ASM178912v1	27774985	-
Candidatus Peribacteria bacterium RIFOXYD2_FULL_58_15	1801943	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.382	58	-	MFYR01	15	1230	1127	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314650	GCA_001789155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/155/GCA_001789155.1_ASM178915v1	27774985	-
Candidatus Peribacteria bacterium RIFOXYD1_FULL_54_13	1801942	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.54869	54.3	-	MFYQ01	40	1436	1265	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314751	GCA_001789165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/165/GCA_001789165.1_ASM178916v1	27774985	-
Candidatus Raymondbacteria bacterium RifOxyA12_full_50_37	1817884	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	4.10977	49.9	-	MFYS01	84	3424	3323	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314389	GCA_001789195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/195/GCA_001789195.1_ASM178919v1	27774985	-
Candidatus Raymondbacteria bacterium RIFOXYA2_FULL_49_16	1817885	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	5.43143	50	-	MFYT01	112	4572	4415	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314369	GCA_001789205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/205/GCA_001789205.1_ASM178920v1	27774985	-
Candidatus Raymondbacteria bacterium RifOxyB12_full_50_8	1817886	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	4.90655	49.5	-	MFYU01	303	4337	3752	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314471	GCA_001789215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/215/GCA_001789215.1_ASM178921v1	27774985	-
Candidatus Raymondbacteria bacterium RifOxyC12_full_50_8	1817888	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	4.83348	49.4	-	MFYV01	334	4303	3622	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314608	GCA_001789245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/245/GCA_001789245.1_ASM178924v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_01_FULL_35_10	1802025	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.32173	35	-	MFZA01	76	1563	1381	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314920	GCA_001789285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/285/GCA_001789285.1_ASM178928v1	27774985	-
Candidatus Raymondbacteria bacterium RIFOXYD12_FULL_49_13	1817890	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	5.33788	49.8	-	MFYX01	160	4613	4163	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314640	GCA_001789275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/275/GCA_001789275.1_ASM178927v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_01_FULL_37_16	1802026	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.447199	36.3	-	MFZB01	18	533	496	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314921	GCA_001789305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/305/GCA_001789305.1_ASM178930v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_01_FULL_38_15	1802028	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.853394	37.6	-	MFZD01	32	925	850	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315014	GCA_001789325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/325/GCA_001789325.1_ASM178932v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_01_FULL_39_8	1802033	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.2355	38.6	-	MFZI01	84	1378	1142	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315019	GCA_001789355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/355/GCA_001789355.1_ASM178935v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_01_FULL_39_12b	1802030	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.935885	38.5	-	MFZF01	39	1041	932	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314843	GCA_001789365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/365/GCA_001789365.1_ASM178936v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_02_FULL_37_13b	1802035	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.16202	35.8	-	MFZK01	23	1194	1122	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315376	GCA_001789395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/395/GCA_001789395.1_ASM178939v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_02_FULL_37_15	1802036	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.07275	36.2	-	MFZL01	50	1156	1044	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315451	GCA_001789405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/405/GCA_001789405.1_ASM178940v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_02_FULL_37_24	1802037	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.06598	37.6	-	MFZM01	43	1098	1010	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315377	GCA_001789435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/435/GCA_001789435.1_ASM178943v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_02_FULL_40_13b	1802041	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.857712	39	-	MFZQ01	32	952	866	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315533	GCA_001789445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/445/GCA_001789445.1_ASM178944v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_02_FULL_40_53	1802024	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.92168	39.8	-	MFZR01	30	1043	961	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315384	GCA_001789475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/475/GCA_001789475.1_ASM178947v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_02_FULL_40_9	1802042	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.445849	38.9	-	MFZS01	36	504	382	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315459	GCA_001789485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/485/GCA_001789485.1_ASM178948v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_02_FULL_43_11	1802043	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.708812	42.4	-	MFZT01	51	787	637	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315461	GCA_001789515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/515/GCA_001789515.1_ASM178951v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_12_41_18	1802044	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.928657	40	-	MFZU01	27	1047	976	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313770	GCA_001789535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/535/GCA_001789535.1_ASM178953v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_12_FULL_38_13	1802049	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.2012	37.4	-	MFZZ01	46	1305	1161	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315747	GCA_001789555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/555/GCA_001789555.1_ASM178955v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_12_FULL_37_9b	1802048	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.802195	36.4	-	MFZY01	77	891	706	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315746	GCA_001789545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/545/GCA_001789545.1_ASM178954v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_12_FULL_41_11	1802052	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.938561	40.6	-	MGAC01	58	1031	828	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315655	GCA_001789595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/595/GCA_001789595.1_ASM178959v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_12_FULL_42_10	1802053	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.571649	41.7	-	MGAD01	43	662	522	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315684	GCA_001789615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/615/GCA_001789615.1_ASM178961v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_37_12	1802056	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.34362	36.3	-	MGAG01	41	1545	1432	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315107	GCA_001789645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/645/GCA_001789645.1_ASM178964v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_35_13	1802055	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.45314	35.2	-	MGAF01	61	1674	1561	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315227	GCA_001789635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/635/GCA_001789635.1_ASM178963v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_37_13	1802057	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.880471	36.7	-	MGAH01	28	941	887	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315199	GCA_001789675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/675/GCA_001789675.1_ASM178967v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_37_16	1802058	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.14303	36.2	-	MGAI01	60	1215	1101	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315293	GCA_001789695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/695/GCA_001789695.1_ASM178969v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_39_19	1802062	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.658267	38.1	-	MGAM01	22	719	668	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315299	GCA_001789725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/725/GCA_001789725.1_ASM178972v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_37_57	1802059	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.967289	37.3	-	MGAJ01	62	1005	898	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315109	GCA_001789715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/715/GCA_001789715.1_ASM178971v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_40_13	1802063	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.03737	39.2	-	MGAN01	21	1055	975	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315116	GCA_001789745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/745/GCA_001789745.1_ASM178974v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_40_32	1802065	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.838272	39.3	-	MGAP01	42	919	837	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315209	GCA_001789775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/775/GCA_001789775.1_ASM178977v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_40_42	1802066	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.900937	39.9	-	MGAQ01	29	1010	939	10/19/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04315303	GCA_001789795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/795/GCA_001789795.1_ASM178979v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_41_22	1802067	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.00553	40.8	-	MGAR01	37	1047	972	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315119	GCA_001789805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/805/GCA_001789805.1_ASM178980v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_42_14	1802068	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.515764	41.9	-	MGAS01	30	562	487	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315255	GCA_001789815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/815/GCA_001789815.1_ASM178981v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_44_13	1802069	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.467269	43.3	-	MGAT01	31	545	427	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315123	GCA_001789855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/855/GCA_001789855.1_ASM178985v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_45_11	1802070	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.591724	44.4	-	MGAU01	73	706	463	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315309	GCA_001789885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/885/GCA_001789885.1_ASM178988v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_02_FULL_37_19	1802072	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.03085	37.6	-	MGAW01	31	1049	974	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315968	GCA_001789875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/875/GCA_001789875.1_ASM178987v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_02_FULL_37_9	1802073	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.00567	35.8	-	MGAX01	89	1123	828	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316038	GCA_001789895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/895/GCA_001789895.1_ASM178989v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_02_FULL_38_10	1802074	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.743041	37.2	-	MGAY01	54	820	656	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316103	GCA_001789935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/935/GCA_001789935.1_ASM178993v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_02_FULL_39_8	1802075	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.710819	38.5	-	MGAZ01	55	846	661	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315971	GCA_001789955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/955/GCA_001789955.1_ASM178995v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_02_FULL_40_13	1802076	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.925264	40	-	MGBA01	25	1036	966	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315972	GCA_001789965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/965/GCA_001789965.1_ASM178996v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_02_FULL_41_9	1802077	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.750803	40	-	MGBB01	59	852	652	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315974	GCA_001789995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/789/995/GCA_001789995.1_ASM178999v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_12_FULL_37_7b	1802079	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.854716	36.8	-	MGBD01	69	942	800	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315853	GCA_001790005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/005/GCA_001790005.1_ASM179000v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_12_FULL_40_12	1802080	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.919362	40	-	MGBE01	23	1034	956	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315855	GCA_001790035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/035/GCA_001790035.1_ASM179003v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFOXYA1_FULL_37_12	1802081	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.21693	37.3	-	MGBF01	1	1225	1178	10/19/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04316216	GCA_001790045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/045/GCA_001790045.1_ASM179004v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFOXYA1_FULL_41_12	1802082	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.920933	40.8	-	MGBG01	25	1008	892	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314330	GCA_001790075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/075/GCA_001790075.1_ASM179007v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFOXYA2_FULL_38_14	1802083	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.21693	37.3	-	MGBH01	1	1225	1178	10/19/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04316236	GCA_001790095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/095/GCA_001790095.1_ASM179009v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFOXYB1_FULL_40_23	1802085	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.21693	37.3	-	MGBJ01	1	1225	1178	10/19/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04316227	GCA_001790115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/115/GCA_001790115.1_ASM179011v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFOXYB1_FULL_41_27	1802086	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.8315	41.1	-	MGBK01	23	873	802	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314498	GCA_001790125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/125/GCA_001790125.1_ASM179012v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFOXYB2_FULL_38_10	1802087	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.218	37.3	-	MGBL01	17	1248	1164	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314455	GCA_001790155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/155/GCA_001790155.1_ASM179015v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFOXYB2_FULL_41_10	1802088	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.907604	40.6	-	MGBM01	31	1000	882	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314434	GCA_001790165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/165/GCA_001790165.1_ASM179016v1	27774985	-
Candidatus Roizmanbacteria bacterium RIFOXYC1_FULL_38_14	1802089	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.21697	37.3	-	MGBN01	1	1228	1181	10/19/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04316209	GCA_001790195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/195/GCA_001790195.1_ASM179019v1	27774985	-
Candidatus Rokubacteria bacterium GWA2_73_35	1802096	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	3.54411	72.9	-	MGBU01	281	3622	3291	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314171	GCA_001790205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/205/GCA_001790205.1_ASM179020v1	27774985	-
Candidatus Rokubacteria bacterium GWC2_70_24	1802098	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	2.94113	70.2	-	MGBW01	266	3095	2750	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313872	GCA_001790235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/235/GCA_001790235.1_ASM179023v1	27774985	-
Candidatus Rokubacteria bacterium RIFCSPHIGHO2_02_FULL_69_13	1802101	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	2.57521	64.1	-	MGBZ01	1013	2591	1342	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316133	GCA_001790245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/245/GCA_001790245.1_ASM179024v1	27774985	-
Candidatus Rokubacteria bacterium RIFCSPHIGHO2_02_FULL_73_26	1802102	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	4.35764	72.9	-	MGCA01	418	4386	3767	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315486	GCA_001790275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/275/GCA_001790275.1_ASM179027v1	27774985	-
Candidatus Rokubacteria bacterium RIFCSPLOWO2_02_FULL_68_19	1802104	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	3.09338	67.1	-	MGCC01	211	3333	2543	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315991	GCA_001790285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/285/GCA_001790285.1_ASM179028v1	27774985	-
Candidatus Rokubacteria bacterium RIFCSPLOWO2_02_FULL_72_37	1802106	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	2.38937	71.8	-	MGCE01	204	2446	2183	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316005	GCA_001790315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/315/GCA_001790315.1_ASM179031v1	27774985	-
Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22	1802110	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	3.44417	71.4	-	MGCI01	327	3548	3135	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315780	GCA_001790335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/335/GCA_001790335.1_ASM179033v1	27774985	-
Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_01_FULL_45_15	1802132	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.22076	45.4	-	MGCK01	6	1274	1210	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314860	GCA_001790365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/365/GCA_001790365.1_ASM179036v1	27774985	-
Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_73_47	1802111	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	4.04289	73.4	-	MGCJ01	215	3984	3701	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315832	GCA_001790345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/345/GCA_001790345.1_ASM179034v1	27774985	-
Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_01_FULL_46_30	1802133	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.10761	45.8	-	MGCL01	3	1186	1140	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314944	GCA_001790385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/385/GCA_001790385.1_ASM179038v1	27774985	-
Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_01_FULL_48_12	1802134	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.447998	47.7	-	MGCM01	38	508	412	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315037	GCA_001790415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/415/GCA_001790415.1_ASM179041v1	27774985	-
Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_02_FULL_46_12	1802136	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.17357	45.3	-	MGCO01	30	1250	1106	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315392	GCA_001790435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/435/GCA_001790435.1_ASM179043v1	27774985	-
Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_12_FULL_41_12	1802138	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.856182	41.2	-	MGCQ01	9	902	849	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315689	GCA_001790445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/445/GCA_001790445.1_ASM179044v1	27774985	-
Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_02_FULL_47_12	1802137	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.661502	46.4	-	MGCP01	48	762	602	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315467	GCA_001790455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/455/GCA_001790455.1_ASM179045v1	27774985	-
Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_12_FULL_42_8	1802139	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.586511	41.5	-	MGCR01	61	678	534	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315752	GCA_001790495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/495/GCA_001790495.1_ASM179049v1	27774985	-
Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_12_FULL_44_22	1802140	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.23137	45.4	-	MGCS01	16	1297	1234	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315628	GCA_001790515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/515/GCA_001790515.1_ASM179051v1	27774985	-
Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_12_FULL_47_16	1802141	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.02747	46.2	-	MGCT01	10	1105	1044	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315573	GCA_001790535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/535/GCA_001790535.1_ASM179053v1	27774985	-
Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_12_FULL_47_16b	1802142	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.793886	46.6	-	MGCU01	29	867	786	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315753	GCA_001790525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/525/GCA_001790525.1_ASM179052v1	27774985	-
Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_12_FULL_47_17	1802143	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.768878	47.1	-	MGCV01	41	837	746	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315657	GCA_001790575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/575/GCA_001790575.1_ASM179057v1	27774985	-
Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_12_FULL_48_21	1802144	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.532591	47.4	-	MGCW01	47	614	541	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315690	GCA_001790595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/595/GCA_001790595.1_ASM179059v1	27774985	-
Candidatus Saccharibacteria bacterium RIFCSPLOWO2_02_FULL_46_7	1802148	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.569472	45.5	-	MGDA01	76	723	488	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316120	GCA_001790615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/615/GCA_001790615.1_ASM179061v1	27774985	-
Candidatus Saccharibacteria bacterium RIFCSPLOWO2_01_FULL_49_22	1802147	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.664287	49.1	-	MGCZ01	44	756	670	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315316	GCA_001790625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/625/GCA_001790625.1_ASM179062v1	27774985	-
Candidatus Schekmanbacteria bacterium GWA2_38_11	1817876	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	2.1107	37.8	-	MGDB01	158	2027	1689	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314163	GCA_001790645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/645/GCA_001790645.1_ASM179064v1	27774985	-
Candidatus Schekmanbacteria bacterium GWA2_38_9	1817877	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	2.49386	37.4	-	MGDC01	74	2391	2175	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314164	GCA_001790675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/675/GCA_001790675.1_ASM179067v1	27774985	-
Candidatus Schekmanbacteria bacterium RBG_13_48_7	1817878	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	4.67713	36.4	-	MGDD01	356	4526	2526	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314282	GCA_001790695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/695/GCA_001790695.1_ASM179069v1	27774985	-
Candidatus Schekmanbacteria bacterium RBG_16_38_11	1817880	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	2.00036	37.5	-	MGDF01	185	1957	1465	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314270	GCA_001790715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/715/GCA_001790715.1_ASM179071v1	27774985	-
Candidatus Shapirobacteria bacterium RIFOXYA1_FULL_39_17	1802150	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.599013	38.6	-	MGDK01	44	713	635	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314316	GCA_001790735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/735/GCA_001790735.1_ASM179073v1	27774985	-
Candidatus Shapirobacteria bacterium RIFOXYB1_FULL_38_38	1802151	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.664362	37.8	-	MGDL01	60	746	663	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314488	GCA_001790745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/745/GCA_001790745.1_ASM179074v1	27774985	-
Candidatus Shapirobacteria bacterium RIFOXYC1_FULL_38_24	1802152	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.703602	38.4	-	MGDM01	52	806	700	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314531	GCA_001790765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/765/GCA_001790765.1_ASM179076v1	27774985	-
Candidatus Schekmanbacteria bacterium RIFCSPHIGHO2_02_FULL_38_11	1817881	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	2.62529	37.4	-	MGDG01	119	2518	2239	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315396	GCA_001790785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/785/GCA_001790785.1_ASM179078v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_02_FULL_46_47	1802386	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.02281	46.6	-	MGDU01	27	1066	999	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315511	GCA_001790815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/815/GCA_001790815.1_ASM179081v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_02_FULL_47_44	1802388	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.962199	47.6	-	MGDW01	42	993	915	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315362	GCA_001790825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/825/GCA_001790825.1_ASM179082v1	27774985	-
Candidatus Schekmanbacteria bacterium RIFCSPLOWO2_02_FULL_38_14	1817882	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	2.68123	37.5	-	MGDH01	43	2485	2380	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315925	GCA_001790855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/855/GCA_001790855.1_ASM179085v1	27774985	-
Candidatus Schekmanbacteria bacterium RIFCSPLOWO2_12_FULL_38_15	1817883	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	2.74677	37.5	-	MGDI01	45	2554	2469	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315819	GCA_001790865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/865/GCA_001790865.1_ASM179086v1	27774985	-
Candidatus Shapirobacteria bacterium RBG_13_44_7	1802149	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.412519	41.5	-	MGDJ01	33	547	307	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316244	GCA_001790895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/895/GCA_001790895.1_ASM179089v1	27774985	-
Candidatus Shapirobacteria bacterium RIFOXYD1_FULL_38_32	1802153	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.734298	38.5	-	MGDN01	44	837	768	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314727	GCA_001790905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/905/GCA_001790905.1_ASM179090v1	27774985	-
Candidatus Tectomicrobia bacterium RIFCSPLOWO2_02_FULL_70_19	1802342	PRJNA288027	288027	Nitrospinae/Tectomicrobia group	Candidatus Tectomicrobia	3.52029	69	-	MGDO01	155	3414	2985	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316060	GCA_001790935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/935/GCA_001790935.1_ASM179093v1	27774985	-
Candidatus Tectomicrobia bacterium RIFCSPLOWO2_12_FULL_69_37	1802343	PRJNA288027	288027	Nitrospinae/Tectomicrobia group	Candidatus Tectomicrobia	3.30374	69.4	-	MGDP01	228	3254	2999	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316115	GCA_001790955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/955/GCA_001790955.1_ASM179095v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_01_FULL_46_23	1802382	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.14132	45.9	-	MGDQ01	41	1098	1020	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314905	GCA_001790975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/975/GCA_001790975.1_ASM179097v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_01_FULL_47_10	1802383	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.0078	47	-	MGDR01	54	1092	890	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314992	GCA_001790985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/790/985/GCA_001790985.1_ASM179098v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_01_FULL_47_11	1802384	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.01161	46.6	-	MGDS01	50	1086	944	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314906	GCA_001791005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/005/GCA_001791005.1_ASM179100v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_02_FULL_53_13	1802389	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.927625	53	-	MGDX01	41	945	824	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315370	GCA_001791035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/035/GCA_001791035.1_ASM179103v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_01_FULL_63_20	1802385	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.862982	63.8	-	MGDT01	8	877	791	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315009	GCA_001791045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/045/GCA_001791045.1_ASM179104v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_02_FULL_47_29	1802387	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.14952	46.1	-	MGDV01	43	1111	1035	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315513	GCA_001791055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/055/GCA_001791055.1_ASM179105v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_02_FULL_54_11	1802390	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.749779	53.7	-	MGDY01	58	830	644	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315522	GCA_001791065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/065/GCA_001791065.1_ASM179106v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_02_FULL_57_19	1802391	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.958782	56.7	-	MGDZ01	69	948	838	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315525	GCA_001791115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/115/GCA_001791115.1_ASM179111v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_02_FULL_60_10	1802392	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.886499	59.4	-	MGEA01	97	870	616	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315449	GCA_001791135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/135/GCA_001791135.1_ASM179113v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_12_FULL_46_13	1802394	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.00844	45.9	-	MGEC01	43	1006	899	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315648	GCA_001791155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/155/GCA_001791155.1_ASM179115v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_02_FULL_60_44	1802393	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.872208	59.8	-	MGEB01	54	869	784	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315526	GCA_001791145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/145/GCA_001791145.1_ASM179114v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_12_FULL_47_11	1802395	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.07487	46.5	-	MGED01	57	1139	980	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315740	GCA_001791195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/195/GCA_001791195.1_ASM179119v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_12_FULL_47_12	1802396	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.03268	47.1	-	MGEE01	36	1091	971	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315649	GCA_001791205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/205/GCA_001791205.1_ASM179120v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_12_FULL_57_11	1802398	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.789244	56.1	-	MGEG01	67	850	648	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315680	GCA_001791225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/225/GCA_001791225.1_ASM179122v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_12_FULL_54_23	1802397	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.860014	54.3	-	MGEF01	68	890	808	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316131	GCA_001791245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/245/GCA_001791245.1_ASM179124v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_12_FULL_60_25	1802399	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.979332	59.8	-	MGEH01	37	973	881	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315591	GCA_001791275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/275/GCA_001791275.1_ASM179127v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPLOWO2_01_FULL_47_17	1802400	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.07058	47.2	-	MGEI01	5	1112	1044	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315273	GCA_001791305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/305/GCA_001791305.1_ASM179130v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPLOWO2_01_FULL_47_24	1802401	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.04764	46.7	-	MGEJ01	22	1089	1017	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315274	GCA_001791295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/295/GCA_001791295.1_ASM179129v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPLOWO2_01_FULL_47_25	1802402	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.197	46	-	MGEK01	40	1153	1074	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315089	GCA_001791325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/325/GCA_001791325.1_ASM179132v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPLOWO2_01_FULL_53_9	1802403	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.663148	52.6	-	MGEL01	65	745	534	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315285	GCA_001791335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/335/GCA_001791335.1_ASM179133v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPLOWO2_01_FULL_55_36	1802404	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.642212	54.6	-	MGEM01	54	672	598	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315289	GCA_001791375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/375/GCA_001791375.1_ASM179137v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPLOWO2_02_FULL_46_19	1802405	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.12874	46	-	MGEN01	37	1079	994	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316025	GCA_001791385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/385/GCA_001791385.1_ASM179138v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPLOWO2_02_FULL_46_25	1802406	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.07057	46.7	-	MGEO01	19	1113	1043	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316091	GCA_001791415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/415/GCA_001791415.1_ASM179141v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPLOWO2_02_FULL_48_12	1802407	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.795264	47.2	-	MGEP01	64	871	663	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316028	GCA_001791425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/425/GCA_001791425.1_ASM179142v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPLOWO2_02_FULL_48_18	1802408	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.07441	47.2	-	MGEQ01	10	1114	1048	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316029	GCA_001791455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/455/GCA_001791455.1_ASM179145v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPLOWO2_02_FULL_49_11	1802409	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.967388	48.9	-	MGER01	78	995	765	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316030	GCA_001791465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/465/GCA_001791465.1_ASM179146v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPLOWO2_02_FULL_51_9	1802410	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.66785	50.3	-	MGES01	55	697	529	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315963	GCA_001791475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/475/GCA_001791475.1_ASM179147v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPLOWO2_02_FULL_53_10	1802411	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.898202	52.9	-	MGET01	64	987	755	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316033	GCA_001791505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/505/GCA_001791505.1_ASM179150v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPLOWO2_12_FULL_46_10	1802413	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.06936	45.8	-	MGEV01	53	1051	942	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315898	GCA_001791535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/535/GCA_001791535.1_ASM179153v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPLOWO2_12_FULL_47_10	1802414	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.04219	46.7	-	MGEW01	35	1102	1007	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315899	GCA_001791555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/555/GCA_001791555.1_ASM179155v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPLOWO2_02_FULL_54_37	1802412	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.702475	54.3	-	MGEU01	67	733	674	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316124	GCA_001791575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/575/GCA_001791575.1_ASM179157v1	27774985	-
Candidatus Uhrbacteria bacterium RIFCSPLOWO2_12_FULL_47_9	1802415	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.00584	47	-	MGEX01	51	1073	960	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315900	GCA_001791565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/565/GCA_001791565.1_ASM179156v1	27774985	-
Candidatus Uhrbacteria bacterium RIFOXYA2_FULL_40_9	1802416	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.974511	40	-	MGEY01	64	964	846	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314360	GCA_001791615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/615/GCA_001791615.1_ASM179161v1	27774985	-
Candidatus Uhrbacteria bacterium RIFOXYB12_FULL_58_10	1802418	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.12306	57.6	-	MGFA01	28	1127	1026	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314469	GCA_001791645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/645/GCA_001791645.1_ASM179164v1	27774985	-
Candidatus Uhrbacteria bacterium RIFOXYA2_FULL_41_8	1802417	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.702004	40	-	MGEZ01	69	733	546	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314379	GCA_001791635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/635/GCA_001791635.1_ASM179163v1	27774985	-
Candidatus Uhrbacteria bacterium RIFOXYB2_FULL_41_10	1802419	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.76982	40.6	-	MGFB01	47	787	697	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314438	GCA_001791655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/655/GCA_001791655.1_ASM179165v1	27774985	-
Candidatus Uhrbacteria bacterium RIFOXYB2_FULL_41_18	1802420	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.05583	40.4	-	MGFC01	53	1038	959	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314453	GCA_001791695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/695/GCA_001791695.1_ASM179169v1	27774985	-
Candidatus Uhrbacteria bacterium RIFOXYB2_FULL_57_15	1802422	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.1013	57.7	-	MGFE01	31	1109	1024	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314425	GCA_001791725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/725/GCA_001791725.1_ASM179172v1	27774985	-
Candidatus Uhrbacteria bacterium RIFOXYB2_FULL_45_11	1802421	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.882956	44.7	-	MGFD01	70	943	789	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314439	GCA_001791715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/715/GCA_001791715.1_ASM179171v1	27774985	-
Candidatus Uhrbacteria bacterium RIFOXYC2_FULL_47_19	1802424	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.0366	47.1	-	MGFG01	34	958	895	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314601	GCA_001791745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/745/GCA_001791745.1_ASM179174v1	27774985	-
Candidatus Uhrbacteria bacterium RIFOXYC12_FULL_57_11	1802423	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.09169	57.5	-	MGFF01	31	1115	992	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314622	GCA_001791735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/735/GCA_001791735.1_ASM179173v1	27774985	-
Candidatus Wallbacteria bacterium GWC2_49_35	1817813	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	3.66911	49.9	-	MGFH01	253	2832	2551	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314129	GCA_001791795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/795/GCA_001791795.1_ASM179179v1	27774985	-
Candidatus Woesearchaeota archaeon RBG_13_36_6	1802470	PRJNA288027	288027	DPANN group	Candidatus Woesearchaeota	0.689463	34.2	-	MGFI01	63	879	528	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316261	GCA_001791825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/825/GCA_001791825.1_ASM179182v1	27774985	-
Candidatus Woesebacteria bacterium GWA1_41_8	1802471	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.673537	40.8	-	MGFJ01	39	767	651	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314236	GCA_001791815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/815/GCA_001791815.1_ASM179181v1	27774985	-
Candidatus Woesebacteria bacterium GWA1_42_12	1802472	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.461446	42.2	-	MGFK01	38	561	470	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314233	GCA_001791835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/835/GCA_001791835.1_ASM179183v1	27774985	-
Candidatus Woesebacteria bacterium GWB1_43_5	1802474	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.460074	42.8	-	MGFM01	43	560	407	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314246	GCA_001791895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/895/GCA_001791895.1_ASM179189v1	27774985	-
Candidatus Woesebacteria bacterium GWB1_37_5	1802473	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.997932	37.4	-	MGFL01	62	1139	940	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314245	GCA_001791885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/885/GCA_001791885.1_ASM179188v1	27774985	-
Candidatus Woesebacteria bacterium GWC1_42_13	1802475	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.476746	42	-	MGFN01	46	577	480	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314250	GCA_001791875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/875/GCA_001791875.1_ASM179187v1	27774985	-
Candidatus Woesebacteria bacterium GWC2_33_12	1802476	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.852577	32.9	-	MGFO01	23	997	937	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314251	GCA_001791935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/935/GCA_001791935.1_ASM179193v1	27774985	-
Candidatus Woesebacteria bacterium RBG_13_34_9	1802477	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.659502	32.4	-	MGFP01	63	772	488	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314280	GCA_001791955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/955/GCA_001791955.1_ASM179195v1	27774985	-
Candidatus Woesebacteria bacterium RBG_13_36_22	1802478	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.09125	36	-	MGFQ01	58	1317	1231	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314088	GCA_001791965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/965/GCA_001791965.1_ASM179196v1	27774985	-
Candidatus Woesebacteria bacterium RBG_13_46_13	1802479	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.711173	46.7	-	MGFR01	5	786	730	10/19/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04313989	GCA_001791995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/791/995/GCA_001791995.1_ASM179199v1	27774985	-
Candidatus Woesebacteria bacterium RBG_16_34_12	1802480	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.967855	34.7	-	MGFS01	32	1091	1000	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314043	GCA_001792005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/005/GCA_001792005.1_ASM179200v1	27774985	-
Candidatus Woesebacteria bacterium RBG_16_36_11	1802481	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.67886	35.7	-	MGFT01	35	788	633	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313734	GCA_001792035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/035/GCA_001792035.1_ASM179203v1	27774985	-
Candidatus Woesebacteria bacterium RBG_16_39_8b	1802482	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.598914	37.3	-	MGFU01	67	758	475	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313701	GCA_001792055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/055/GCA_001792055.1_ASM179205v1	27774985	-
Candidatus Woesebacteria bacterium RBG_16_41_13	1802484	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.1133	41.7	-	MGFW01	19	1283	1199	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313736	GCA_001792075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/075/GCA_001792075.1_ASM179207v1	27774985	-
Candidatus Woesebacteria bacterium RBG_16_40_11	1802483	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.09881	38.4	-	MGFV01	17	1217	1140	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314262	GCA_001792065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/065/GCA_001792065.1_ASM179206v1	27774985	-
Candidatus Woesebacteria bacterium RBG_16_42_24	1802485	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.873092	42.2	-	MGFX01	7	951	893	10/19/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04313718	GCA_001792115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/115/GCA_001792115.1_ASM179211v1	27774985	-
Candidatus Woesebacteria bacterium RBG_19FT_COMBO_37_29	1802486	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.564497	36.2	-	MGFY01	34	625	564	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313676	GCA_001792135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/135/GCA_001792135.1_ASM179213v1	27774985	-
Candidatus Woesebacteria bacterium RBG_19FT_COMBO_42_9	1802487	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.01841	41.3	-	MGFZ01	43	1139	889	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313677	GCA_001792155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/155/GCA_001792155.1_ASM179215v1	27774985	-
Candidatus Woesebacteria bacterium RBG_19FT_COMBO_47_8	1802488	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.778876	46	-	MGGA01	51	921	644	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313682	GCA_001792165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/165/GCA_001792165.1_ASM179216v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_37_10	1802489	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.588161	37.1	-	MGGB01	63	661	503	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314838	GCA_001792185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/185/GCA_001792185.1_ASM179218v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_38_10	1802490	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.02232	37.7	-	MGGC01	41	1084	959	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314839	GCA_001792215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/215/GCA_001792215.1_ASM179221v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_38_26b	1802491	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.840001	37.4	-	MGGD01	85	913	808	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314924	GCA_001792225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/225/GCA_001792225.1_ASM179222v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_38_9	1802492	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.982917	37.5	-	MGGE01	59	1150	975	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314867	GCA_001792255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/255/GCA_001792255.1_ASM179225v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_38_9b	1802493	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.842582	37.7	-	MGGF01	75	973	736	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315016	GCA_001792265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/265/GCA_001792265.1_ASM179226v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_39_17	1802494	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.82726	39	-	MGGG01	49	960	877	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315018	GCA_001792295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/295/GCA_001792295.1_ASM179229v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_39_23	1802495	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.850044	38.6	-	MGGH01	37	968	898	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314844	GCA_001792305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/305/GCA_001792305.1_ASM179230v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_39_28	1802496	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.07531	38	-	MGGI01	38	1194	1130	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314780	GCA_001792335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/335/GCA_001792335.1_ASM179233v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_39_32	1802497	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.17396	37.8	-	MGGJ01	13	1255	1188	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314868	GCA_001792345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/345/GCA_001792345.1_ASM179234v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_40_22	1802499	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.13535	38.7	-	MGGL01	19	1219	1169	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314781	GCA_001792375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/375/GCA_001792375.1_ASM179237v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_39_95	1802498	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.14314	38.9	-	MGGK01	50	1197	1130	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314845	GCA_001792385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/385/GCA_001792385.1_ASM179238v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_42_80	1802501	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.00982	41.8	-	MGGN01	39	1163	1090	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315026	GCA_001792415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/415/GCA_001792415.1_ASM179241v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_41_10	1802500	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.772714	41.4	-	MGGM01	35	902	765	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314954	GCA_001792425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/425/GCA_001792425.1_ASM179242v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_44_10	1802502	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.809763	43.5	-	MGGO01	33	1012	890	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314783	GCA_001792465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/465/GCA_001792465.1_ASM179246v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_44_21	1802503	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.996282	43.6	-	MGGP01	30	1203	1126	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314956	GCA_001792455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/455/GCA_001792455.1_ASM179245v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_02_FULL_38_9	1802504	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.985619	37.2	-	MGGQ01	61	1151	983	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315453	GCA_001792495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/495/GCA_001792495.1_ASM179249v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_02_FULL_39_13	1802505	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.26031	38.9	-	MGGR01	40	1325	1241	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315454	GCA_001792515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/515/GCA_001792515.1_ASM179251v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_02_FULL_42_20	1802506	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.07717	41.6	-	MGGS01	18	1231	1170	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315537	GCA_001792535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/535/GCA_001792535.1_ASM179253v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_12_FULL_38_11	1802507	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.15918	37.7	-	MGGT01	29	1248	1130	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315653	GCA_001792545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/545/GCA_001792545.1_ASM179254v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_12_FULL_38_9	1802508	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.04749	38.1	-	MGGU01	39	1194	1061	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315593	GCA_001792575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/575/GCA_001792575.1_ASM179257v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_12_FULL_40_20	1802509	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.15522	39.2	-	MGGV01	44	1231	1160	10/19/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315566	GCA_001792585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/585/GCA_001792585.1_ASM179258v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_12_FULL_46_16	1802513	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.508674	45.6	-	MGGZ01	47	617	513	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315598	GCA_001792915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/915/GCA_001792915.1_ASM179291v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_12_FULL_44_11	1802512	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.93666	43.4	-	MGGY01	38	1129	1003	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315750	GCA_001792945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/945/GCA_001792945.1_ASM179294v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_12_FULL_41_24	1802510	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.07461	41.7	-	MGGW01	21	1233	1172	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315596	GCA_001792935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/935/GCA_001792935.1_ASM179293v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPHIGHO2_12_FULL_42_9	1802511	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.619231	41.5	-	MGGX01	44	741	558	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315568	GCA_001792925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/925/GCA_001792925.1_ASM179292v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPLOWO2_01_FULL_39_10	1802516	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.15215	37.9	-	MGHC01	38	1310	1153	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315228	GCA_001793015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/015/GCA_001793015.1_ASM179301v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPLOWO2_01_FULL_38_20	1802515	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.12565	37.8	-	MGHB01	34	1253	1190	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315203	GCA_001793005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/005/GCA_001793005.1_ASM179300v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPLOWO2_01_FULL_37_19	1802514	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.02177	37.1	-	MGHA01	78	1090	970	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315108	GCA_001792995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/995/GCA_001792995.1_ASM179299v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPLOWO2_01_FULL_39_10b	1802517	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.09651	37.9	-	MGHD01	26	1134	1029	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315045	GCA_001793025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/025/GCA_001793025.1_ASM179302v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPLOWO2_01_FULL_39_21	1802519	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.931661	38.6	-	MGHF01	45	1048	953	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315114	GCA_001793085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/085/GCA_001793085.1_ASM179308v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPLOWO2_01_FULL_39_14	1802518	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.976957	38.6	-	MGHE01	52	1118	993	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315205	GCA_001793075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/075/GCA_001793075.1_ASM179307v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPLOWO2_01_FULL_39_23	1802520	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.12613	38.5	-	MGHG01	18	1231	1184	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315229	GCA_001793095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/095/GCA_001793095.1_ASM179309v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPLOWO2_01_FULL_39_25	1802521	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.25183	37.7	-	MGHH01	16	1348	1272	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315046	GCA_001793105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/105/GCA_001793105.1_ASM179310v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPLOWO2_01_FULL_39_61	1802522	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.08354	39.2	-	MGHI01	46	1147	1083	10/20/16	10/21/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04315115	GCA_001793155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/155/GCA_001793155.1_ASM179315v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPLOWO2_01_FULL_42_67	1802523	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.03259	41.7	-	MGHJ01	36	1196	1123	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315122	GCA_001793165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/165/GCA_001793165.1_ASM179316v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPLOWO2_01_FULL_43_11	1802524	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.874269	42	-	MGHK01	34	977	836	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315138	GCA_001793175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/175/GCA_001793175.1_ASM179317v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPLOWO2_01_FULL_44_14	1802525	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.935143	43.4	-	MGHL01	23	1122	1035	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315128	GCA_001793185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/185/GCA_001793185.1_ASM179318v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPLOWO2_01_FULL_44_24b	1802526	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.898253	43.9	-	MGHM01	23	1090	1021	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315050	GCA_001793235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/235/GCA_001793235.1_ASM179323v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPLOWO2_02_FULL_42_10	1802527	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.07494	41.4	-	MGHN01	31	1253	1101	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316043	GCA_001793255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/255/GCA_001793255.1_ASM179325v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPLOWO2_12_FULL_39_9	1802528	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.21737	38.9	-	MGHO01	75	1314	1208	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315907	GCA_001793265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/265/GCA_001793265.1_ASM179326v1	27774985	-
Candidatus Woesebacteria bacterium RIFCSPLOWO2_12_FULL_42_8	1802529	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.867453	41.7	-	MGHP01	61	1042	918	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315909	GCA_001793275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/275/GCA_001793275.1_ASM179327v1	27774985	-
Candidatus Woesebacteria bacterium RIFOXYA1_FULL_31_71	1802530	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.820381	30.8	-	MGHQ01	8	937	883	10/20/16	10/21/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04314306	GCA_001793315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/315/GCA_001793315.1_ASM179331v1	27774985	-
Candidatus Woesebacteria bacterium RIFOXYA1_FULL_38_9	1802531	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.879897	37.5	-	MGHR01	50	1033	885	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314312	GCA_001793335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/335/GCA_001793335.1_ASM179333v1	27774985	-
Candidatus Woesebacteria bacterium RIFOXYA1_FULL_40_18	1802532	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.618855	40.1	-	MGHS01	53	703	622	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314331	GCA_001793345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/345/GCA_001793345.1_ASM179334v1	27774985	-
Candidatus Woesebacteria bacterium RIFOXYA1_FULL_43_16	1802533	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.583907	43.3	-	MGHT01	34	687	604	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314329	GCA_001793355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/355/GCA_001793355.1_ASM179335v1	27774985	-
Candidatus Woesebacteria bacterium RIFOXYA1_FULL_43_9	1802534	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.545277	42.4	-	MGHU01	67	702	500	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314309	GCA_001793395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/395/GCA_001793395.1_ASM179339v1	27774985	-
Candidatus Woesebacteria bacterium RIFOXYA1_FULL_48_16	1802535	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.502623	47.1	-	MGHV01	72	599	496	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314318	GCA_001793415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/415/GCA_001793415.1_ASM179341v1	27774985	-
Candidatus Woesebacteria bacterium RIFOXYB1_FULL_31_120	1802536	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.790591	30.9	-	MGHW01	26	915	847	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314496	GCA_001793425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/425/GCA_001793425.1_ASM179342v1	27774985	-
Candidatus Woesebacteria bacterium RIFOXYB1_FULL_41_13	1802540	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.678478	40.2	-	MGIA01	33	763	627	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314514	GCA_001793455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/455/GCA_001793455.1_ASM179345v1	27774985	-
Candidatus Woesebacteria bacterium RIFOXYB1_FULL_33_9	1802537	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.782127	32.7	-	MGHX01	56	942	798	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314487	GCA_001793465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/465/GCA_001793465.1_ASM179346v1	27774985	-
Candidatus Woesebacteria bacterium RIFOXYB1_FULL_38_16	1802538	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.964925	37.7	-	MGHY01	30	1080	995	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314503	GCA_001793475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/475/GCA_001793475.1_ASM179347v1	27774985	-
Candidatus Woesebacteria bacterium RIFOXYB1_FULL_40_26	1802539	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.48272	40.5	-	MGHZ01	42	579	519	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314482	GCA_001793485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/485/GCA_001793485.1_ASM179348v1	27774985	-
Candidatus Woesebacteria bacterium RIFOXYB1_FULL_42_36	1802541	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.582301	43.6	-	MGIB01	31	682	609	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314515	GCA_001793535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/535/GCA_001793535.1_ASM179353v1	27774985	-
Candidatus Woesebacteria bacterium RIFOXYC1_FULL_31_51	1802543	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.819677	30.8	-	MGID01	9	932	880	10/20/16	10/21/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04314543	GCA_001793555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/555/GCA_001793555.1_ASM179355v1	27774985	-
Candidatus Woesebacteria bacterium RIFOXYB1_FULL_47_31	1802542	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.574068	46.7	-	MGIC01	48	683	593	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314497	GCA_001793545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/545/GCA_001793545.1_ASM179354v1	27774985	-
Candidatus Woesebacteria bacterium RIFOXYC1_FULL_41_14	1802544	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.590644	40.4	-	MGIE01	39	676	580	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314555	GCA_001793575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/575/GCA_001793575.1_ASM179357v1	27774985	-
Candidatus Woesebacteria bacterium RIFOXYC1_FULL_46_16	1802546	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.519185	46.1	-	MGIG01	35	611	528	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314556	GCA_001793625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/625/GCA_001793625.1_ASM179362v1	27774985	-
Candidatus Woesebacteria bacterium RIFOXYC1_FULL_43_18	1802545	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.580743	43.6	-	MGIF01	39	692	611	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314542	GCA_001793615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/615/GCA_001793615.1_ASM179361v1	27774985	-
Candidatus Woesebacteria bacterium RIFOXYD1_FULL_31_53	1802547	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.807181	30.7	-	MGIH01	11	924	869	10/20/16	10/21/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04314748	GCA_001793635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/635/GCA_001793635.1_ASM179363v1	27774985	-
Candidatus Woesebacteria bacterium RIFOXYD1_FULL_33_11	1802548	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.774464	33.1	-	MGII01	30	930	844	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314769	GCA_001793665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/665/GCA_001793665.1_ASM179366v1	27774985	-
Candidatus Woesebacteria bacterium RIFOXYD1_FULL_40_21	1802549	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.456261	40.9	-	MGIJ01	41	539	470	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314767	GCA_001793695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/695/GCA_001793695.1_ASM179369v1	27774985	-
Candidatus Woesebacteria bacterium RIFOXYD1_FULL_43_18	1802551	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.60627	43.8	-	MGIL01	22	707	633	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314726	GCA_001793715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/715/GCA_001793715.1_ASM179371v1	27774985	-
Candidatus Woesebacteria bacterium RIFOXYD1_FULL_41_28	1802550	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.597322	40.5	-	MGIK01	37	660	598	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314747	GCA_001793705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/705/GCA_001793705.1_ASM179370v1	27774985	-
Candidatus Woesebacteria bacterium RIFOXYD1_FULL_46_19	1802552	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.596803	46.3	-	MGIM01	35	688	609	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314750	GCA_001793755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/755/GCA_001793755.1_ASM179375v1	27774985	-
Candidatus Wolfebacteria bacterium GWA1_42_9	1802553	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.550676	41.7	-	MGIN01	32	633	489	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314229	GCA_001793775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/775/GCA_001793775.1_ASM179377v1	27774985	-
Candidatus Wolfebacteria bacterium RBG_13_41_7	1802554	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.379335	38.7	-	MGIO01	37	461	253	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316165	GCA_001793785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/785/GCA_001793785.1_ASM179378v1	27774985	-
Candidatus Wolfebacteria bacterium RIFCSPHIGHO2_01_FULL_48_22	1802555	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.728415	47.4	-	MGIP01	26	821	744	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314908	GCA_001793815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/815/GCA_001793815.1_ASM179381v1	27774985	-
Candidatus Wolfebacteria bacterium RIFCSPLOWO2_01_FULL_38_11	1802556	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.540729	37.5	-	MGIQ01	23	608	516	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315152	GCA_001793825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/825/GCA_001793825.1_ASM179382v1	27774985	-
Candidatus Wolfebacteria bacterium RIFCSPLOWO2_01_FULL_45_19	1802557	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.588889	44.7	-	MGIR01	10	638	570	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315173	GCA_001793855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/855/GCA_001793855.1_ASM179385v1	27774985	-
Candidatus Wolfebacteria bacterium RIFCSPLOWO2_01_FULL_47_17b	1802558	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.729804	47	-	MGIS01	25	845	763	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315088	GCA_001793865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/865/GCA_001793865.1_ASM179386v1	27774985	-
Candidatus Wolfebacteria bacterium RIFOXYB1_FULL_54_12	1802559	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.824713	48.7	-	MGIT01	6	870	789	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314493	GCA_001793895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/895/GCA_001793895.1_ASM179389v1	27774985	-
Candidatus Wolfebacteria bacterium RIFOXYB2_FULL_49_7	1802560	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.588511	48	-	MGIU01	51	678	520	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314454	GCA_001793905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/905/GCA_001793905.1_ASM179390v1	27774985	-
Candidatus Wolfebacteria bacterium RIFOXYD1_FULL_48_65	1802561	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.814881	48.7	-	MGIV01	24	846	790	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314763	GCA_001793935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/935/GCA_001793935.1_ASM179393v1	27774985	-
Candidatus Wolfebacteria bacterium RIFOXYD12_FULL_48_21	1802562	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.8787	48.2	-	MGIW01	6	921	869	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314645	GCA_001793945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/945/GCA_001793945.1_ASM179394v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_01_FULL_39_44	1802658	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.709436	39.1	-	MGIY01	17	759	718	10/20/16	10/21/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04314969	GCA_001793985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/985/GCA_001793985.1_ASM179398v1	27774985	-
Candidatus Wolfebacteria bacterium RIFOXYD2_FULL_48_11	1802563	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.848643	47.6	-	MGIX01	39	950	734	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314653	GCA_001793975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/793/975/GCA_001793975.1_ASM179397v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_01_FULL_39_8b	1802659	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.707814	38.7	-	MGIZ01	64	770	629	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314970	GCA_001794015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/015/GCA_001794015.1_ASM179401v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_01_FULL_41_21	1802660	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.704475	41.3	-	MGJA01	15	746	686	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314888	GCA_001794025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/025/GCA_001794025.1_ASM179402v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_01_FULL_41_26	1802661	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.799807	40.4	-	MGJB01	18	877	811	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314802	GCA_001794055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/055/GCA_001794055.1_ASM179405v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_01_FULL_41_27	1802662	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.584846	41.5	-	MGJC01	44	648	567	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314889	GCA_001794065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/065/GCA_001794065.1_ASM179406v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_01_FULL_41_53	1802663	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.00959	40.8	-	MGJD01	46	1044	972	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314803	GCA_001794095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/095/GCA_001794095.1_ASM179409v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_01_FULL_42_12	1802664	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.756253	41.5	-	MGJE01	51	837	694	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314804	GCA_001794105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/105/GCA_001794105.1_ASM179410v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_01_FULL_43_32	1802665	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.761941	42.9	-	MGJF01	13	815	756	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314895	GCA_001794125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/125/GCA_001794125.1_ASM179412v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_01_FULL_43_42	1802666	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.901718	43.2	-	MGJG01	28	982	905	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314808	GCA_001794145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/145/GCA_001794145.1_ASM179414v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_01_FULL_44_110b	1802667	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.502043	43.7	-	MGJH01	27	587	530	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314810	GCA_001794175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/175/GCA_001794175.1_ASM179417v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_01_FULL_44_17	1802668	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.674209	43.6	-	MGJI01	31	743	680	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314984	GCA_001794195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/195/GCA_001794195.1_ASM179419v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_01_FULL_44_22	1802669	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.444406	44.2	-	MGJJ01	31	491	417	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314899	GCA_001794205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/205/GCA_001794205.1_ASM179420v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_01_FULL_44_24	1802670	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.970849	44.1	-	MGJK01	20	1016	956	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314812	GCA_001794215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/215/GCA_001794215.1_ASM179421v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_01_FULL_45_42	1802671	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.846585	45.3	-	MGJL01	48	882	789	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314903	GCA_001794255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/255/GCA_001794255.1_ASM179425v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_01_FULL_48_25b	1802672	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.562616	47.9	-	MGJM01	18	633	581	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314822	GCA_001794275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/275/GCA_001794275.1_ASM179427v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_02_FULL_38_22b	1802673	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.913742	38.9	-	MGJN01	20	971	926	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315339	GCA_001794285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/285/GCA_001794285.1_ASM179428v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_02_FULL_39_10	1802674	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.706893	38.2	-	MGJO01	66	792	592	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315414	GCA_001794295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/295/GCA_001794295.1_ASM179429v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_02_FULL_41_11	1802675	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.27292	41.2	-	MGJP01	70	1386	1193	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316134	GCA_001794335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/335/GCA_001794335.1_ASM179433v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_02_FULL_41_12	1802676	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.540121	41.1	-	MGJQ01	50	597	507	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315417	GCA_001794355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/355/GCA_001794355.1_ASM179435v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_02_FULL_41_29	1802677	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.02948	40.8	-	MGJR01	36	1060	996	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315344	GCA_001794375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/375/GCA_001794375.1_ASM179437v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_02_FULL_43_12	1802678	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.751899	42.8	-	MGJS01	19	810	723	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315422	GCA_001794385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/385/GCA_001794385.1_ASM179438v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_02_FULL_43_15c	1802679	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.603004	42.6	-	MGJT01	34	629	553	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315424	GCA_001794415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/415/GCA_001794415.1_ASM179441v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_02_FULL_43_17	1802680	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.861746	43.1	-	MGJU01	23	935	861	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315501	GCA_001794435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/435/GCA_001794435.1_ASM179443v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_02_FULL_43_22	1802681	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.856003	43	-	MGJV01	46	884	798	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316135	GCA_001794455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/455/GCA_001794455.1_ASM179445v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_02_FULL_44_12b	1802682	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.0295	43.9	-	MGJW01	42	1115	1009	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315352	GCA_001794475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/475/GCA_001794475.1_ASM179447v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_02_FULL_44_36b	1802683	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.567079	43.3	-	MGJX01	15	642	588	10/20/16	10/21/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04315354	GCA_001794485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/485/GCA_001794485.1_ASM179448v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_02_FULL_46_19	1802684	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.598235	46	-	MGJY01	29	655	577	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315434	GCA_001794515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/515/GCA_001794515.1_ASM179451v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_02_FULL_50_12	1802685	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.519497	49.2	-	MGJZ01	35	602	477	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315441	GCA_001794525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/525/GCA_001794525.1_ASM179452v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_12_FULL_41_9	1802686	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.891809	40.6	-	MGKA01	52	960	820	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315736	GCA_001794555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/555/GCA_001794555.1_ASM179455v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_12_FULL_43_11	1802687	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.680274	42.5	-	MGKB01	25	750	656	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315586	GCA_001794575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/575/GCA_001794575.1_ASM179457v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_12_FULL_44_29b	1802688	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.599649	43.9	-	MGKC01	20	670	607	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315738	GCA_001794595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/595/GCA_001794595.1_ASM179459v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_12_FULL_45_19b	1802689	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.603702	44.5	-	MGKD01	32	639	581	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315677	GCA_001794605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/605/GCA_001794605.1_ASM179460v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_01_FULL_39_28	1802690	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.815413	38.8	-	MGKE01	15	875	836	10/20/16	10/21/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04315063	GCA_001794635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/635/GCA_001794635.1_ASM179463v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_01_FULL_41_33	1802691	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.515916	41.3	-	MGKF01	39	585	509	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315253	GCA_001794655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/655/GCA_001794655.1_ASM179465v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_01_FULL_41_34	1802692	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.904339	40.4	-	MGKG01	28	978	895	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315068	GCA_001794675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/675/GCA_001794675.1_ASM179467v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_01_FULL_43_46	1802696	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.698125	42.7	-	MGKK01	12	743	692	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315076	GCA_001794695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/695/GCA_001794695.1_ASM179469v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_01_FULL_44_88	1802698	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.563049	43.8	-	MGKM01	24	630	570	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315265	GCA_001794715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/715/GCA_001794715.1_ASM179471v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_02_FULL_43_10	1802703	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.713072	42.6	-	MGKR01	34	786	668	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316014	GCA_001794735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/735/GCA_001794735.1_ASM179473v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_02_FULL_44_18	1802705	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.631294	43.8	-	MGKT01	9	702	645	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316084	GCA_001794755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/755/GCA_001794755.1_ASM179475v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFOXYA1_FULL_44_17	1802712	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.722174	42.9	-	MGLA01	13	771	721	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314328	GCA_001794775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/775/GCA_001794775.1_ASM179477v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFOXYB1_FULL_44_29	1802714	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.735919	43	-	MGLC01	11	795	734	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314492	GCA_001794795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/795/GCA_001794795.1_ASM179479v1	27774985	-
Caulobacterales bacterium GWE1_67_11	1797583	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	2.08435	65	-	MGLI01	206	2189	1366	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314214	GCA_001794815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/815/GCA_001794815.1_ASM179481v1	27774985	-
Caulobacterales bacterium RIFCSPHIGHO2_01_FULL_70_19	1797585	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	2.91942	70.7	-	MGLK01	42	2983	2831	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314776	GCA_001794825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/825/GCA_001794825.1_ASM179482v1	27774985	-
Chlamydiae bacterium RIFCSPHIGHO2_01_FULL_44_39	1797598	PRJNA288027	288027	PVC group	Chlamydiae	1.56965	44.7	-	MGLR01	30	1528	1466	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314949	GCA_001794865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/865/GCA_001794865.1_ASM179486v1	27774985	-
Caulobacterales bacterium RIFOXYA1_FULL_67_7	1797587	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	1.98881	60.2	-	MGLM01	908	1798	850	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316246	GCA_001794855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/855/GCA_001794855.1_ASM179485v1	27774985	-
Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_44_59	1797602	PRJNA288027	288027	PVC group	Chlamydiae	1.56855	44.7	-	MGLV01	30	1531	1470	10/20/16	10/21/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04315549	GCA_001794895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/895/GCA_001794895.1_ASM179489v1	27774985	-
Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_11	1797603	PRJNA288027	288027	PVC group	Chlamydiae	1.25848	48.4	-	MGLW01	71	1240	1065	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315661	GCA_001794905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/905/GCA_001794905.1_ASM179490v1	27774985	-
Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_9	1797605	PRJNA288027	288027	PVC group	Chlamydiae	1.32059	48.4	-	MGLY01	93	1376	1166	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315632	GCA_001794935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/935/GCA_001794935.1_ASM179493v1	27774985	-
Chloroflexi bacterium GWC2_73_18	1797616	PRJNA288027	288027	Terrabacteria group	Chloroflexi	2.93378	72.9	-	MGMJ01	137	2777	2494	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313844	GCA_001794945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/945/GCA_001794945.1_ASM179494v1	27774985	-
Chloroflexi bacterium GWD2_49_16	1797617	PRJNA288027	288027	Terrabacteria group	Chloroflexi	3.36879	48.3	-	MGMK01	31	3111	3029	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313848	GCA_001794965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/965/GCA_001794965.1_ASM179496v1	27774985	-
Chloroflexi bacterium RBG_13_46_9	1797619	PRJNA288027	288027	Terrabacteria group	Chloroflexi	1.4808	42.8	-	MGMM01	151	1538	812	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314095	GCA_001794985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/794/985/GCA_001794985.1_ASM179498v1	27774985	-
Chloroflexi bacterium RBG_13_50_10	1797622	PRJNA288027	288027	Terrabacteria group	Chloroflexi	1.73639	48.2	-	MGMP01	159	1773	1276	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314096	GCA_001795015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/015/GCA_001795015.1_ASM179501v1	27774985	-
Chloroflexi bacterium RBG_13_53_26	1797629	PRJNA288027	288027	Terrabacteria group	Chloroflexi	1.59996	53.6	-	MGMW01	121	1569	1458	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313993	GCA_001795035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/035/GCA_001795035.1_ASM179503v1	27774985	-
Chloroflexi bacterium RBG_13_60_9	1797636	PRJNA288027	288027	Terrabacteria group	Chloroflexi	1.64805	53.4	-	MGND01	215	1706	651	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316235	GCA_001795045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/045/GCA_001795045.1_ASM179504v1	27774985	-
Chloroflexi bacterium RBG_13_66_10	1797637	PRJNA288027	288027	Terrabacteria group	Chloroflexi	2.96089	62.9	-	MGNE01	261	3017	1687	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314087	GCA_001795065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/065/GCA_001795065.1_ASM179506v1	27774985	-
Chloroflexi bacterium RBG_16_47_49	1797639	PRJNA288027	288027	Terrabacteria group	Chloroflexi	2.04065	46.7	-	MGNG01	131	1886	1742	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313974	GCA_001795085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/085/GCA_001795085.1_ASM179508v1	27774985	-
Chloroflexi bacterium RBG_16_48_8	1797641	PRJNA288027	288027	Terrabacteria group	Chloroflexi	3.98163	47.9	-	MGNI01	228	3993	2841	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314035	GCA_001795115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/115/GCA_001795115.1_ASM179511v1	27774985	-
Chloroflexi bacterium RBG_16_54_18	1797648	PRJNA288027	288027	Terrabacteria group	Chloroflexi	3.82299	53.3	-	MGNP01	173	3545	3170	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314037	GCA_001795125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/125/GCA_001795125.1_ASM179512v1	27774985	-
Chloroflexi bacterium RBG_16_56_8	1797650	PRJNA288027	288027	Terrabacteria group	Chloroflexi	2.16822	52.9	-	MGNR01	269	2471	1251	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314024	GCA_001795155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/155/GCA_001795155.1_ASM179515v1	27774985	-
Chloroflexi bacterium RBG_16_57_11	1797651	PRJNA288027	288027	Terrabacteria group	Chloroflexi	4.76917	55.8	-	MGNS01	172	4435	3608	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313756	GCA_001795165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/165/GCA_001795165.1_ASM179516v1	27774985	-
Chloroflexi bacterium RBG_16_57_8	1797652	PRJNA288027	288027	Terrabacteria group	Chloroflexi	2.20573	56.5	-	MGNT01	190	2345	1555	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314268	GCA_001795195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/195/GCA_001795195.1_ASM179519v1	27774985	-
Chloroflexi bacterium RBG_16_58_8	1797655	PRJNA288027	288027	Terrabacteria group	Chloroflexi	1.45138	55.9	-	MGNW01	177	1644	825	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314258	GCA_001795205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/205/GCA_001795205.1_ASM179520v1	27774985	-
Chloroflexi bacterium RBG_16_64_32	1797658	PRJNA288027	288027	Terrabacteria group	Chloroflexi	1.66623	64.6	-	MGNZ01	158	1739	1455	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313755	GCA_001795235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/235/GCA_001795235.1_ASM179523v1	27774985	-
Chloroflexi bacterium RBG_16_70_13	1797662	PRJNA288027	288027	Terrabacteria group	Chloroflexi	2.88714	70.5	-	MGOD01	141	2926	2193	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313705	GCA_001795245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/245/GCA_001795245.1_ASM179524v1	27774985	-
Chloroflexi bacterium RBG_19FT_COMBO_47_15	1797664	PRJNA288027	288027	Terrabacteria group	Chloroflexi	0.722196	45.4	-	MGOF01	79	785	505	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314146	GCA_001795275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/275/GCA_001795275.1_ASM179527v1	27774985	-
Chloroflexi bacterium RBG_19FT_COMBO_47_9	1797665	PRJNA288027	288027	Terrabacteria group	Chloroflexi	3.23092	44.4	-	MGOG01	315	3388	2031	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314150	GCA_001795285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/285/GCA_001795285.1_ASM179528v1	27774985	-
Chloroflexi bacterium RBG_19FT_COMBO_48_23	1797666	PRJNA288027	288027	Terrabacteria group	Chloroflexi	0.706002	47.3	-	MGOH01	83	774	625	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314057	GCA_001795315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/315/GCA_001795315.1_ASM179531v1	27774985	-
Chloroflexi bacterium RBG_19FT_COMBO_55_16	1797669	PRJNA288027	288027	Terrabacteria group	Chloroflexi	2.52984	53.9	-	MGOK01	155	2435	1869	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314066	GCA_001795335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/335/GCA_001795335.1_ASM179533v1	27774985	-
Chloroflexi bacterium RIFCSPLOWO2_02_FULL_71_16	1797672	PRJNA288027	288027	Terrabacteria group	Chloroflexi	1.93193	70	-	MGON01	131	2032	1522	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315924	GCA_001795345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/345/GCA_001795345.1_ASM179534v1	27774985	-
Clostridiales bacterium GWD2_32_19	1797679	PRJNA288027	288027	Terrabacteria group	Firmicutes	1.97432	31.5	-	MGOU01	47	1773	1702	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313939	GCA_001795385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/385/GCA_001795385.1_ASM179538v1	27774985	-
Chromatiales bacterium RIFOXYA1_FULL_46_5	1797676	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	2.78267	45.5	-	MGOR01	1062	2796	1769	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314324	GCA_001795365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/365/GCA_001795365.1_ASM179536v1	27774985	-
Clostridiales bacterium GWF2_36_10	1797682	PRJNA288027	288027	Terrabacteria group	Firmicutes	2.06266	36.5	-	MGOX01	37	1982	1851	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313936	GCA_001795415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/415/GCA_001795415.1_ASM179541v1	27774985	-
Deltaproteobacteria bacterium GWA2_42_85	1797803	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.16438	42	-	MGPF01	117	1181	1052	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314177	GCA_001795495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/495/GCA_001795495.1_ASM179549v1	27774985	-
Deltaproteobacteria bacterium GWA2_50_8	1797807	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.37454	47.5	-	MGPJ01	99	1397	994	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314174	GCA_001795505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/505/GCA_001795505.1_ASM179550v1	27774985	-
Deltaproteobacteria bacterium GWA2_54_12	1797808	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.07581	54	-	MGPK01	77	2033	1845	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314173	GCA_001795535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/535/GCA_001795535.1_ASM179553v1	27774985	-
Deltaproteobacteria bacterium GWA2_55_82	1797810	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.74264	55.4	-	MGPM01	14	2635	2571	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314100	GCA_001795545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/545/GCA_001795545.1_ASM179554v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_01_FULL_41_67	1802693	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.00429	40.8	-	MGKH01	45	1028	961	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315069	GCA_001795585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/585/GCA_001795585.1_ASM179558v1	27774985	-
Deltaproteobacteria bacterium GWB2_65_81	1797815	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.34224	66	-	MGPR01	82	2280	2165	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313912	GCA_001795575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/575/GCA_001795575.1_ASM179557v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_01_FULL_42_49	1802694	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.807499	42	-	MGKI01	14	841	785	10/20/16	10/21/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04315071	GCA_001795615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/615/GCA_001795615.1_ASM179561v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_01_FULL_43_22	1802695	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.866891	43	-	MGKJ01	20	959	880	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315166	GCA_001795625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/625/GCA_001795625.1_ASM179562v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_01_FULL_44_22	1802697	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.977733	43.9	-	MGKL01	22	1042	986	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315078	GCA_001795655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/655/GCA_001795655.1_ASM179565v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_01_FULL_45_72	1802699	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.608347	45.3	-	MGKN01	34	664	596	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315270	GCA_001795665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/665/GCA_001795665.1_ASM179566v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_01_FULL_49_17	1802700	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.613638	49.1	-	MGKO01	16	667	585	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315094	GCA_001795695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/695/GCA_001795695.1_ASM179569v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_01_FULL_49_25	1802701	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.954071	48.9	-	MGKP01	30	1050	986	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315186	GCA_001795715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/715/GCA_001795715.1_ASM179571v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_02_FULL_41_13	1802702	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.02246	40.8	-	MGKQ01	26	1042	982	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315942	GCA_001795735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/735/GCA_001795735.1_ASM179573v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_02_FULL_43_10b	1802704	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.548317	42.3	-	MGKS01	51	614	454	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316080	GCA_001795745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/745/GCA_001795745.1_ASM179574v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_02_FULL_45_10	1802706	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.618553	44.7	-	MGKU01	41	669	544	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316020	GCA_001795775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/775/GCA_001795775.1_ASM179577v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_02_FULL_45_18	1802707	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.627228	45.5	-	MGKV01	23	674	608	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316089	GCA_001795795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/795/GCA_001795795.1_ASM179579v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_02_FULL_47_9b	1802708	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.557064	46.4	-	MGKW01	49	692	540	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316027	GCA_001795815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/815/GCA_001795815.1_ASM179581v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_12_FULL_41_8	1802709	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.797547	40.7	-	MGKX01	65	846	747	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315786	GCA_001795825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/825/GCA_001795825.1_ASM179582v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_12_FULL_43_11b	1802710	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.767938	42.8	-	MGKY01	23	824	747	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315839	GCA_001795855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/855/GCA_001795855.1_ASM179585v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_12_FULL_44_13b	1802711	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.619996	43.7	-	MGKZ01	9	690	627	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315790	GCA_001795875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/875/GCA_001795875.1_ASM179587v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFOXYA2_FULL_45_28	1802713	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.731831	43	-	MGLB01	8	787	735	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314362	GCA_001795895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/895/GCA_001795895.1_ASM179589v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFOXYB2_FULL_44_18	1802715	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.721957	42.9	-	MGLD01	11	773	718	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314423	GCA_001795915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/915/GCA_001795915.1_ASM179591v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFOXYC1_FULL_44_16	1802716	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.73537	43	-	MGLE01	12	794	731	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314526	GCA_001795935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/935/GCA_001795935.1_ASM179593v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFOXYC2_FULL_44_13	1802717	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.752252	42.9	-	MGLF01	13	813	739	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314578	GCA_001795955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/955/GCA_001795955.1_ASM179595v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFOXYD1_FULL_42_10	1802718	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.715268	40.8	-	MGLG01	59	817	639	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314759	GCA_001795975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/975/GCA_001795975.1_ASM179597v1	27774985	-
Candidatus Yanofskybacteria bacterium RIFOXYD1_FULL_44_17	1802719	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.740034	43	-	MGLH01	11	789	727	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314721	GCA_001795995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/995/GCA_001795995.1_ASM179599v1	27774985	-
Caulobacterales bacterium RIFCSPHIGHO2_01_FULL_67_30	1797584	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	2.78059	67.5	-	MGLJ01	609	2998	2454	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314948	GCA_001796015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/015/GCA_001796015.1_ASM179601v1	27774985	-
Caulobacterales bacterium RIFCSPHIGHO2_12_FULL_68_13	1797586	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	2.43804	66.5	-	MGLL01	211	2540	1906	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315576	GCA_001796025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/025/GCA_001796025.1_ASM179602v1	27774985	-
Caulobacterales bacterium RIFOXYB1_FULL_67_16	1797588	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	2.74783	67.1	-	MGLN01	195	2828	2384	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314473	GCA_001796045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/045/GCA_001796045.1_ASM179604v1	27774985	-
Chlamydiae bacterium GWA2_50_15	1797595	PRJNA288027	288027	PVC group	Chlamydiae	1.17737	49.3	-	MGLO01	32	1070	993	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314106	GCA_001796065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/065/GCA_001796065.1_ASM179606v1	27774985	-
Chlamydiae bacterium GWC2_50_10	1797596	PRJNA288027	288027	PVC group	Chlamydiae	1.17228	48.8	-	MGLP01	52	1114	966	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313949	GCA_001796095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/095/GCA_001796095.1_ASM179609v1	27774985	-
Chlamydiae bacterium GWF2_49_8	1797597	PRJNA288027	288027	PVC group	Chlamydiae	1.01993	48.8	-	MGLQ01	92	1002	760	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314219	GCA_001796105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/105/GCA_001796105.1_ASM179610v1	27774985	-
Chlamydiae bacterium RIFCSPHIGHO2_02_FULL_45_9	1797599	PRJNA288027	288027	PVC group	Chlamydiae	1.34264	44.5	-	MGLS01	104	1396	1156	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315395	GCA_001796125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/125/GCA_001796125.1_ASM179612v1	27774985	-
Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_27_8	1797601	PRJNA288027	288027	PVC group	Chlamydiae	0.97476	27.3	-	MGLU01	96	1034	817	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315692	GCA_001796155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/155/GCA_001796155.1_ASM179615v1	27774985	-
Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_32	1797604	PRJNA288027	288027	PVC group	Chlamydiae	1.3973	48.9	-	MGLX01	72	1291	1190	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315578	GCA_001796175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/175/GCA_001796175.1_ASM179617v1	27774985	-
Chlamydiae bacterium RIFCSPHIGHO2_02_FULL_49_29	1797600	PRJNA288027	288027	PVC group	Chlamydiae	1.38702	49.1	-	MGLT01	69	1274	1187	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315471	GCA_001796185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/185/GCA_001796185.1_ASM179618v1	27774985	-
Chlamydiae bacterium RIFCSPLOWO2_01_FULL_28_7	1797606	PRJNA288027	288027	PVC group	Chlamydiae	0.708526	27.9	-	MGLZ01	75	734	572	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315041	GCA_001796195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/195/GCA_001796195.1_ASM179619v1	27774985	-
Chlamydiae bacterium RIFCSPLOWO2_01_FULL_44_52	1797607	PRJNA288027	288027	PVC group	Chlamydiae	1.53759	44.7	-	MGMA01	29	1496	1438	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315131	GCA_001796235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/235/GCA_001796235.1_ASM179623v1	27774985	-
Chlamydiae bacterium RIFCSPLOWO2_02_FULL_45_22	1797608	PRJNA288027	288027	PVC group	Chlamydiae	1.57587	44.7	-	MGMB01	30	1535	1475	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316055	GCA_001796255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/255/GCA_001796255.1_ASM179625v1	27774985	-
Chlamydiae bacterium RIFCSPLOWO2_12_FULL_45_20	1797610	PRJNA288027	288027	PVC group	Chlamydiae	1.54218	44.7	-	MGMD01	28	1502	1443	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315767	GCA_001796285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/285/GCA_001796285.1_ASM179628v1	27774985	-
Chlamydiae bacterium RIFCSPLOWO2_02_FULL_49_12	1797609	PRJNA288027	288027	PVC group	Chlamydiae	1.41353	48.8	-	MGMC01	57	1314	1175	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316003	GCA_001796275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/275/GCA_001796275.1_ASM179627v1	27774985	-
Chlamydiae bacterium RIFCSPLOWO2_12_FULL_49_12	1797611	PRJNA288027	288027	PVC group	Chlamydiae	1.41874	49.1	-	MGME01	46	1315	1224	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315818	GCA_001796315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/315/GCA_001796315.1_ASM179631v1	27774985	-
Chloroflexi bacterium GWB2_49_20	1797612	PRJNA288027	288027	Terrabacteria group	Chloroflexi	3.37489	48.3	-	MGMF01	28	3117	3038	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313846	GCA_001796335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/335/GCA_001796335.1_ASM179633v1	27774985	-
Chloroflexi bacterium GWC2_49_37	1797614	PRJNA288027	288027	Terrabacteria group	Chloroflexi	3.40629	48.2	-	MGMH01	35	3146	3070	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313847	GCA_001796365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/365/GCA_001796365.1_ASM179636v1	27774985	-
Chloroflexi bacterium GWB2_54_36	1797613	PRJNA288027	288027	Terrabacteria group	Chloroflexi	2.89452	54.4	-	MGMG01	103	2631	2508	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313845	GCA_001796355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/355/GCA_001796355.1_ASM179635v1	27774985	-
Chloroflexi bacterium GWC2_70_10	1797615	PRJNA288027	288027	Terrabacteria group	Chloroflexi	1.30785	68.7	-	MGMI01	124	1445	911	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314203	GCA_001796395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/395/GCA_001796395.1_ASM179639v1	27774985	-
Chloroflexi bacterium RBG_13_46_14	1797618	PRJNA288027	288027	Terrabacteria group	Chloroflexi	1.6789	45	-	MGML01	199	1723	1301	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314279	GCA_001796415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/415/GCA_001796415.1_ASM179641v1	27774985	-
Chloroflexi bacterium RBG_13_48_10	1797620	PRJNA288027	288027	Terrabacteria group	Chloroflexi	2.94397	45.7	-	MGMN01	279	3025	1898	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314009	GCA_001796435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/435/GCA_001796435.1_ASM179643v1	27774985	-
Chloroflexi bacterium RBG_13_48_17	1797621	PRJNA288027	288027	Terrabacteria group	Chloroflexi	0.874462	47.9	-	MGMO01	89	946	782	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314091	GCA_001796445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/445/GCA_001796445.1_ASM179644v1	27774985	-
Chloroflexi bacterium RBG_13_50_21	1797623	PRJNA288027	288027	Terrabacteria group	Chloroflexi	2.48796	49	-	MGMQ01	195	2403	2109	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314092	GCA_001796475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/475/GCA_001796475.1_ASM179647v1	27774985	-
Chloroflexi bacterium RBG_13_51_18	1797624	PRJNA288027	288027	Terrabacteria group	Chloroflexi	1.4966	50.5	-	MGMR01	119	1554	1350	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314010	GCA_001796495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/495/GCA_001796495.1_ASM179649v1	27774985	-
Chloroflexi bacterium RBG_13_51_36	1797625	PRJNA288027	288027	Terrabacteria group	Chloroflexi	1.93418	50.7	-	MGMS01	57	1925	1818	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314098	GCA_001796515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/515/GCA_001796515.1_ASM179651v1	27774985	-
Chloroflexi bacterium RBG_13_51_52	1797626	PRJNA288027	288027	Terrabacteria group	Chloroflexi	1.16794	49.7	-	MGMT01	92	1235	1115	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313979	GCA_001796525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/525/GCA_001796525.1_ASM179652v1	27774985	-
Chloroflexi bacterium RBG_13_52_12	1797627	PRJNA288027	288027	Terrabacteria group	Chloroflexi	1.23664	49.5	-	MGMU01	114	1357	867	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314011	GCA_001796555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/555/GCA_001796555.1_ASM179655v1	27774985	-
Chloroflexi bacterium RBG_13_52_14	1797628	PRJNA288027	288027	Terrabacteria group	Chloroflexi	1.26439	48.7	-	MGMV01	161	1353	897	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313980	GCA_001796575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/575/GCA_001796575.1_ASM179657v1	27774985	-
Chloroflexi bacterium RBG_13_54_8	1797630	PRJNA288027	288027	Terrabacteria group	Chloroflexi	1.56611	50.5	-	MGMX01	170	1656	916	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314012	GCA_001796595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/595/GCA_001796595.1_ASM179659v1	27774985	-
Chloroflexi bacterium RBG_13_54_9	1797631	PRJNA288027	288027	Terrabacteria group	Chloroflexi	1.43998	50.2	-	MGMY01	154	1539	874	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313981	GCA_001796605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/605/GCA_001796605.1_ASM179660v1	27774985	-
Chloroflexi bacterium RBG_13_56_8	1797632	PRJNA288027	288027	Terrabacteria group	Chloroflexi	1.87024	54.2	-	MGMZ01	171	1866	1096	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313994	GCA_001796635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/635/GCA_001796635.1_ASM179663v1	27774985	-
Chloroflexi bacterium RBG_13_56_8b	1797633	PRJNA288027	288027	Terrabacteria group	Chloroflexi	0.794357	52.6	-	MGNA01	83	933	523	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314097	GCA_001796655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/655/GCA_001796655.1_ASM179665v1	27774985	-
Chloroflexi bacterium RBG_13_60_13	1797635	PRJNA288027	288027	Terrabacteria group	Chloroflexi	1.60408	57.2	-	MGNC01	175	1647	1075	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313982	GCA_001796685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/685/GCA_001796685.1_ASM179668v1	27774985	-
Chloroflexi bacterium RBG_13_57_8	1797634	PRJNA288027	288027	Terrabacteria group	Chloroflexi	1.12623	54.1	-	MGNB01	106	1250	705	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314013	GCA_001796675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/675/GCA_001796675.1_ASM179667v1	27774985	-
Chloroflexi bacterium RBG_13_68_17	1797638	PRJNA288027	288027	Terrabacteria group	Chloroflexi	3.74372	65.1	-	MGNF01	238	3596	2765	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314014	GCA_001796715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/715/GCA_001796715.1_ASM179671v1	27774985	-
Chloroflexi bacterium RBG_16_48_7	1797640	PRJNA288027	288027	Terrabacteria group	Chloroflexi	1.31888	45.8	-	MGNH01	162	1479	759	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314023	GCA_001796725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/725/GCA_001796725.1_ASM179672v1	27774985	-
Chloroflexi bacterium RBG_16_50_11	1797642	PRJNA288027	288027	Terrabacteria group	Chloroflexi	1.74028	48.9	-	MGNJ01	152	1930	1364	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314036	GCA_001796755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/755/GCA_001796755.1_ASM179675v1	27774985	-
Chloroflexi bacterium RBG_16_50_9	1797643	PRJNA288027	288027	Terrabacteria group	Chloroflexi	2.81812	49.8	-	MGNK01	209	3004	2086	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314265	GCA_001796765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/765/GCA_001796765.1_ASM179676v1	27774985	-
Chloroflexi bacterium RBG_16_51_16	1797644	PRJNA288027	288027	Terrabacteria group	Chloroflexi	2.26225	50.5	-	MGNL01	173	2270	1863	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313975	GCA_001796785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/785/GCA_001796785.1_ASM179678v1	27774985	-
Chloroflexi bacterium RBG_16_51_9	1797645	PRJNA288027	288027	Terrabacteria group	Chloroflexi	1.62446	50.1	-	MGNM01	113	1767	1299	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314049	GCA_001796805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/805/GCA_001796805.1_ASM179680v1	27774985	-
Chloroflexi bacterium RBG_16_52_11	1797646	PRJNA288027	288027	Terrabacteria group	Chloroflexi	2.16404	52	-	MGNN01	122	2182	1703	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313754	GCA_001796835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/835/GCA_001796835.1_ASM179683v1	27774985	-
Chloroflexi bacterium RBG_16_54_11	1797647	PRJNA288027	288027	Terrabacteria group	Chloroflexi	2.23268	53.2	-	MGNO01	153	2307	1511	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314257	GCA_001796845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/845/GCA_001796845.1_ASM179684v1	27774985	-
Chloroflexi bacterium RBG_16_56_11	1797649	PRJNA288027	288027	Terrabacteria group	Chloroflexi	2.27113	55.9	-	MGNQ01	58	2337	1968	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314050	GCA_001796865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/865/GCA_001796865.1_ASM179686v1	27774985	-
Chloroflexi bacterium RBG_16_57_9	1797653	PRJNA288027	288027	Terrabacteria group	Chloroflexi	1.76236	53.4	-	MGNU01	213	1995	1001	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314025	GCA_001796885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/885/GCA_001796885.1_ASM179688v1	27774985	-
Chloroflexi bacterium RBG_16_58_14	1797654	PRJNA288027	288027	Terrabacteria group	Chloroflexi	1.50393	56.8	-	MGNV01	105	1438	1101	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313757	GCA_001796915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/915/GCA_001796915.1_ASM179691v1	27774985	-
Chloroflexi bacterium RBG_16_60_22	1797656	PRJNA288027	288027	Terrabacteria group	Chloroflexi	1.86857	60.9	-	MGNX01	119	1827	1634	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314026	GCA_001796935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/935/GCA_001796935.1_ASM179693v1	27774985	-
Chloroflexi bacterium RBG_16_63_12	1797657	PRJNA288027	288027	Terrabacteria group	Chloroflexi	3.40027	61.4	-	MGNY01	236	3496	2156	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313758	GCA_001796945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/945/GCA_001796945.1_ASM179694v1	27774985	-
Chloroflexi bacterium RBG_16_64_43	1797659	PRJNA288027	288027	Terrabacteria group	Chloroflexi	1.8066	64.7	-	MGOA01	177	1744	1531	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314051	GCA_001796965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/965/GCA_001796965.1_ASM179696v1	27774985	-
Chloroflexi bacterium RBG_16_68_14	1797660	PRJNA288027	288027	Terrabacteria group	Chloroflexi	2.47225	66.7	-	MGOB01	103	2509	1936	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314269	GCA_001796995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/796/995/GCA_001796995.1_ASM179699v1	27774985	-
Chloroflexi bacterium RBG_16_69_14	1797661	PRJNA288027	288027	Terrabacteria group	Chloroflexi	2.75941	67.8	-	MGOC01	196	2961	1936	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314053	GCA_001797015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/015/GCA_001797015.1_ASM179701v1	27774985	-
Chloroflexi bacterium RBG_16_72_14	1797663	PRJNA288027	288027	Terrabacteria group	Chloroflexi	3.76582	71.8	-	MGOE01	154	3705	2951	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313706	GCA_001797035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/035/GCA_001797035.1_ASM179703v1	27774985	-
Chloroflexi bacterium RBG_19FT_COMBO_49_13	1797667	PRJNA288027	288027	Terrabacteria group	Chloroflexi	1.53604	47.5	-	MGOI01	94	1516	1112	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314153	GCA_001797045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/045/GCA_001797045.1_ASM179704v1	27774985	-
Chloroflexi bacterium RBG_19FT_COMBO_50_10	1797668	PRJNA288027	288027	Terrabacteria group	Chloroflexi	2.29729	47.8	-	MGOJ01	188	2364	1565	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314151	GCA_001797075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/075/GCA_001797075.1_ASM179707v1	27774985	-
Chloroflexi bacterium RBG_19FT_COMBO_56_12	1797670	PRJNA288027	288027	Terrabacteria group	Chloroflexi	2.49661	52.2	-	MGOL01	214	2638	1478	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314070	GCA_001797095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/095/GCA_001797095.1_ASM179709v1	27774985	-
Chloroflexi bacterium RBG_19FT_COMBO_62_14	1797671	PRJNA288027	288027	Terrabacteria group	Chloroflexi	4.01272	61.4	-	MGOM01	144	3752	2969	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314058	GCA_001797105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/105/GCA_001797105.1_ASM179710v1	27774985	-
Chloroflexi bacterium RIFCSPLOWO2_12_FULL_71_12	1797673	PRJNA288027	288027	Terrabacteria group	Chloroflexi	1.69522	70.7	-	MGOO01	155	1798	1454	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315872	GCA_001797125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/125/GCA_001797125.1_ASM179712v1	27774985	-
Chloroflexi bacterium RIFOXYC12_FULL_59_14	1797674	PRJNA288027	288027	Terrabacteria group	Chloroflexi	1.46833	53.4	-	MGOP01	631	1352	759	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316234	GCA_001797155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/155/GCA_001797155.1_ASM179715v1	27774985	-
Clostridiales bacterium GWB2_37_7	1797677	PRJNA288027	288027	Terrabacteria group	Firmicutes	3.23497	37	-	MGOS01	130	3167	2706	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313944	GCA_001797185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/185/GCA_001797185.1_ASM179718v1	27774985	-
Chloroflexi bacterium RIFOXYD12_FULL_57_15	1797675	PRJNA288027	288027	Terrabacteria group	Chloroflexi	2.85001	51.7	-	MGOQ01	998	2744	1350	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316230	GCA_001797165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/165/GCA_001797165.1_ASM179716v1	27774985	-
Clostridiales bacterium GWC2_40_7	1797678	PRJNA288027	288027	Terrabacteria group	Firmicutes	2.44145	39.2	-	MGOT01	312	2393	1528	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313942	GCA_001797195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/195/GCA_001797195.1_ASM179719v1	27774985	-
Clostridiales bacterium GWD2_32_59	1797680	PRJNA288027	288027	Terrabacteria group	Firmicutes	2.04547	32	-	MGOV01	69	1887	1812	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313943	GCA_001797235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/235/GCA_001797235.1_ASM179723v1	27774985	-
Clostridiales bacterium GWE2_32_10	1797681	PRJNA288027	288027	Terrabacteria group	Firmicutes	1.87489	31.9	-	MGOW01	104	1809	1623	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313945	GCA_001797255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/255/GCA_001797255.1_ASM179725v1	27774985	-
Clostridiales bacterium GWF2_38_85	1797683	PRJNA288027	288027	Terrabacteria group	Firmicutes	2.82838	37.9	-	MGOY01	47	2744	2633	10/20/16	10/21/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04313938	GCA_001797275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/275/GCA_001797275.1_ASM179727v1	27774985	-
Deltaproteobacteria bacterium GWA2_38_16	1797802	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.99904	37.8	-	MGPE01	19	1934	1854	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314112	GCA_001797335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/335/GCA_001797335.1_ASM179733v1	27774985	-
Deltaproteobacteria bacterium GWA2_43_19	1797804	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.18042	42.6	-	MGPG01	107	2188	2068	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314110	GCA_001797355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/355/GCA_001797355.1_ASM179735v1	27774985	-
Deltaproteobacteria bacterium GWA2_45_12	1797805	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.4631	45.2	-	MGPH01	68	2219	2066	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314169	GCA_001797365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/365/GCA_001797365.1_ASM179736v1	27774985	-
Deltaproteobacteria bacterium GWA2_47_9	1797806	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	0.371311	44.9	-	MGPI01	51	443	268	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314176	GCA_001797395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/395/GCA_001797395.1_ASM179739v1	27774985	-
Deltaproteobacteria bacterium GWA2_55_10	1797809	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.2432	55	-	MGPL01	161	2259	1785	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314175	GCA_001797415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/415/GCA_001797415.1_ASM179741v1	27774985	-
Deltaproteobacteria bacterium GWA2_57_13	1797811	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	3.15469	56.5	-	MGPN01	248	3203	2719	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314159	GCA_001797435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/435/GCA_001797435.1_ASM179743v1	27774985	-
Deltaproteobacteria bacterium GWA2_65_63	1797812	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.36291	65.9	-	MGPO01	88	2303	2180	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313911	GCA_001797445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/445/GCA_001797445.1_ASM179744v1	27774985	-
Deltaproteobacteria bacterium GWB2_55_19	1797814	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.62501	56.1	-	MGPQ01	21	2444	2375	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313920	GCA_001797465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/465/GCA_001797465.1_ASM179746v1	27774985	-
Deltaproteobacteria bacterium GWC2_42_11	1797816	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.75104	42	-	MGPS01	73	1751	1598	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314194	GCA_001797495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/495/GCA_001797495.1_ASM179749v1	27774985	-
Candidatus Raymondbacteria bacterium RIFOXYB2_FULL_49_35	1817887	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	5.44973	50	-	MGPY01	113	4590	4448	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314445	GCA_001797525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/525/GCA_001797525.1_ASM179752v1	27774985	-
Deltaproteobacteria bacterium GWB2_42_7	1797813	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.77054	40.9	-	MGPP01	186	1925	1397	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314188	GCA_001797515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/515/GCA_001797515.1_ASM179751v1	27774985	-
Deltaproteobacteria bacterium GWC2_56_8	1797819	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.95554	55.6	-	MGPU01	179	1996	1461	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313914	GCA_001797505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/505/GCA_001797505.1_ASM179750v1	27774985	-
Deltaproteobacteria bacterium GWC2_66_88	1797821	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.15626	66.2	-	MGPW01	113	2134	1988	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313919	GCA_001797575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/575/GCA_001797575.1_ASM179757v1	27774985	-
Deltaproteobacteria bacterium GWD2_42_10	1797822	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.40432	41.8	-	MGPX01	142	2413	2165	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314211	GCA_001797585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/585/GCA_001797585.1_ASM179758v1	27774985	-
Deltaproteobacteria bacterium GWC2_42_51	1797817	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.73466	41.9	-	MGPT01	162	1738	1578	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313908	GCA_001797595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/595/GCA_001797595.1_ASM179759v1	27774985	-
Deltaproteobacteria bacterium GWC2_65_14	1797820	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.25683	66.2	-	MGPV01	67	2213	2040	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313909	GCA_001797615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/615/GCA_001797615.1_ASM179761v1	27774985	-
Deltaproteobacteria bacterium GWD2_55_8	1797823	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.35562	52.7	-	MGPZ01	269	2589	1525	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313910	GCA_001797655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/655/GCA_001797655.1_ASM179765v1	27774985	-
Deltaproteobacteria bacterium GWF2_42_12	1797824	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.4419	42	-	MGQA01	126	2412	2218	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314143	GCA_001797665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/665/GCA_001797665.1_ASM179766v1	27774985	-
Deltaproteobacteria bacterium RBG_13_43_22	1797825	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	3.22797	48.1	-	MGQB01	39	2980	2888	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314000	GCA_001797675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/675/GCA_001797675.1_ASM179767v1	27774985	-
Deltaproteobacteria bacterium RBG_13_49_15	1797827	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.59122	47.9	-	MGQD01	201	2557	2003	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313686	GCA_001797695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/695/GCA_001797695.1_ASM179769v1	27774985	-
Deltaproteobacteria bacterium RBG_13_51_10	1797828	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.43168	46	-	MGQE01	205	1527	768	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316219	GCA_001797735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/735/GCA_001797735.1_ASM179773v1	27774985	-
Deltaproteobacteria bacterium RBG_13_52_11	1797829	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.53626	51.4	-	MGQF01	107	2594	2148	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313986	GCA_001797745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/745/GCA_001797745.1_ASM179774v1	27774985	-
Deltaproteobacteria bacterium RBG_13_58_19	1797832	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.26294	56	-	MGQI01	234	2189	1801	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314001	GCA_001797765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/765/GCA_001797765.1_ASM179776v1	27774985	-
Deltaproteobacteria bacterium RBG_13_60_28	1797833	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.55424	58.8	-	MGQJ01	156	1476	1306	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314094	GCA_001797785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/785/GCA_001797785.1_ASM179778v1	27774985	-
Deltaproteobacteria bacterium RBG_13_61_14	1797834	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	4.73705	60.6	-	MGQK01	132	4154	3571	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313688	GCA_001797815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/815/GCA_001797815.1_ASM179781v1	27774985	-
Deltaproteobacteria bacterium RBG_16_42_7	1797836	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.06034	40.1	-	MGQM01	145	1256	714	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316210	GCA_001797825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/825/GCA_001797825.1_ASM179782v1	27774985	-
Deltaproteobacteria bacterium RBG_16_44_11	1797837	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.43062	43.2	-	MGQN01	47	2463	2137	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313748	GCA_001797845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/845/GCA_001797845.1_ASM179784v1	27774985	-
Deltaproteobacteria bacterium RBG_16_48_10	1797839	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	3.33026	47.7	-	MGQP01	201	3272	2833	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314277	GCA_001797865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/865/GCA_001797865.1_ASM179786v1	27774985	-
Deltaproteobacteria bacterium RBG_16_50_11	1797841	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.84405	48.3	-	MGQR01	233	1901	1437	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313730	GCA_001797895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/895/GCA_001797895.1_ASM179789v1	27774985	-
Deltaproteobacteria bacterium RBG_16_54_11	1797842	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.37077	52.8	-	MGQS01	139	2460	1973	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314029	GCA_001797905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/905/GCA_001797905.1_ASM179790v1	27774985	-
Deltaproteobacteria bacterium RBG_16_54_18	1797843	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.54919	54	-	MGQT01	121	1630	1421	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314040	GCA_001797935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/935/GCA_001797935.1_ASM179793v1	27774985	-
Deltaproteobacteria bacterium RBG_16_58_17	1797845	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.40935	55.9	-	MGQV01	117	2417	2022	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313708	GCA_001797945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/945/GCA_001797945.1_ASM179794v1	27774985	-
Deltaproteobacteria bacterium RBG_16_66_15	1797847	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.75166	65.7	-	MGQX01	45	1722	1567	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314047	GCA_001797975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/975/GCA_001797975.1_ASM179797v1	27774985	-
Deltaproteobacteria bacterium RBG_16_71_12	1797848	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	5.88941	70.2	-	MGQY01	436	5585	3928	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314259	GCA_001797985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/985/GCA_001797985.1_ASM179798v1	27774985	-
Deltaproteobacteria bacterium RBG_19FT_COMBO_52_11	1797852	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.23963	47.6	-	MGRC01	247	2486	1195	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314072	GCA_001798005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/005/GCA_001798005.1_ASM179800v1	27774985	-
Deltaproteobacteria bacterium RBG_19FT_COMBO_58_16	1797854	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.19212	51.1	-	MGRE01	129	1319	570	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313759	GCA_001798015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/015/GCA_001798015.1_ASM179801v1	27774985	-
Deltaproteobacteria bacterium RBG_19FT_COMBO_60_16	1797855	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.09565	60.1	-	MGRF01	74	1171	933	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314061	GCA_001798055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/055/GCA_001798055.1_ASM179805v1	27774985	-
Deltaproteobacteria bacterium RIFCSPHIGHO2_01_FULL_43_49	1797856	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.22562	44.1	-	MGRG01	15	2233	2173	10/20/16	10/21/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04314865	GCA_001798075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/075/GCA_001798075.1_ASM179807v1	27774985	-
Deltaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_38_15	1797857	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.04375	37.8	-	MGRH01	28	1972	1889	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315472	GCA_001798085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/085/GCA_001798085.1_ASM179808v1	27774985	-
Deltaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_40_11	1797858	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.74068	40	-	MGRI01	115	1756	1478	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315323	GCA_001798105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/105/GCA_001798105.1_ASM179810v1	27774985	-
Deltaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_40_28	1797859	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.15768	39.3	-	MGRJ01	31	2082	2013	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315398	GCA_001798135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/135/GCA_001798135.1_ASM179813v1	27774985	-
Deltaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_42_44	1797860	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.90352	41.9	-	MGRK01	145	1883	1747	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315482	GCA_001798155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/155/GCA_001798155.1_ASM179815v1	27774985	-
Deltaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_43_33	1797861	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.18627	42.5	-	MGRL01	126	2204	2083	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315483	GCA_001798165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/165/GCA_001798165.1_ASM179816v1	27774985	-
Deltaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_44_16	1797862	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.97783	44.2	-	MGRM01	29	1947	1880	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315399	GCA_001798185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/185/GCA_001798185.1_ASM179818v1	27774985	-
Deltaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_44_53	1797863	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.23082	44	-	MGRN01	18	2240	2179	10/20/16	10/21/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04315475	GCA_001798205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/205/GCA_001798205.1_ASM179820v1	27774985	-
Deltaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_50_15	1797864	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.70638	49	-	MGRO01	110	1617	1409	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315332	GCA_001798235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/235/GCA_001798235.1_ASM179823v1	27774985	-
Deltaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_40_32	1797866	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.1508	39.3	-	MGRQ01	34	2082	2012	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315579	GCA_001798255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/255/GCA_001798255.1_ASM179825v1	27774985	-
Deltaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_43_9	1797867	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.74757	42.8	-	MGRR01	133	1795	1481	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315668	GCA_001798265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/265/GCA_001798265.1_ASM179826v1	27774985	-
Deltaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_44_21	1797868	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.21656	44.1	-	MGRS01	22	2221	2160	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315551	GCA_001798285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/285/GCA_001798285.1_ASM179828v1	27774985	-
Deltaproteobacteria bacterium RIFCSPLOWO2_01_FULL_38_9	1797870	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.8707	37.7	-	MGRU01	97	1910	1542	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315225	GCA_001798315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/315/GCA_001798315.1_ASM179831v1	27774985	-
Deltaproteobacteria bacterium RIFCSPLOWO2_01_FULL_45_74	1797872	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.22011	44.1	-	MGRW01	14	2226	2168	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315132	GCA_001798335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/335/GCA_001798335.1_ASM179833v1	27774985	-
Deltaproteobacteria bacterium RIFCSPLOWO2_02_44_9	1797873	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.15454	44.3	-	MGRX01	129	1237	1057	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313784	GCA_001798355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/355/GCA_001798355.1_ASM179835v1	27774985	-
Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_40_36	1797875	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.15634	39.3	-	MGRZ01	35	2082	2013	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316057	GCA_001798365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/365/GCA_001798365.1_ASM179836v1	27774985	-
Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_47_10	1797880	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.01155	46.4	-	MGSE01	106	1038	741	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315997	GCA_001798395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/395/GCA_001798395.1_ASM179839v1	27774985	-
Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_55_12	1797883	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.71424	55.3	-	MGSH01	35	2653	2461	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316069	GCA_001798425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/425/GCA_001798425.1_ASM179842v1	27774985	-
Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_53_8	1797882	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.63741	52	-	MGSG01	285	2670	1922	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316112	GCA_001798415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/415/GCA_001798415.1_ASM179841v1	27774985	-
Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_57_26	1797884	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.84072	57.4	-	MGSI01	166	1808	1642	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315998	GCA_001798455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/455/GCA_001798455.1_ASM179845v1	27774985	-
Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_38_8	1797886	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.58522	37.5	-	MGSK01	113	1634	1458	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315880	GCA_001798475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/475/GCA_001798475.1_ASM179847v1	27774985	-
Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_42_16	1797888	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.21411	41.8	-	MGSM01	138	2179	2032	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315776	GCA_001798485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/485/GCA_001798485.1_ASM179848v1	27774985	-
Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_44_12	1797890	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.21654	44	-	MGSO01	23	2227	2154	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315770	GCA_001798515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/515/GCA_001798515.1_ASM179851v1	27774985	-
Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_50_11	1797891	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.76469	49	-	MGSP01	107	1710	1506	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315777	GCA_001798535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/535/GCA_001798535.1_ASM179853v1	27774985	-
Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22	1797892	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	3.32194	57.1	-	MGSQ01	323	3361	3012	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315828	GCA_001798545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/545/GCA_001798545.1_ASM179854v1	27774985	-
Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_16	1797893	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.64157	59.5	-	MGSR01	191	1676	1389	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315882	GCA_001798565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/565/GCA_001798565.1_ASM179856v1	27774985	-
Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	1797894	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	4.18818	59.7	-	MGSS01	162	4120	3913	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315778	GCA_001798595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/595/GCA_001798595.1_ASM179859v1	27774985	-
Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15	1797895	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	6.36546	58.3	-	MGST01	381	5458	4940	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314410	GCA_001798605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/605/GCA_001798605.1_ASM179860v1	27774985	-
Deltaproteobacteria bacterium RIFOXYA2_FULL_42_10	1797897	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.58269	41.6	-	MGSV01	190	2579	2257	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314356	GCA_001798625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/625/GCA_001798625.1_ASM179862v1	27774985	-
Deltaproteobacteria bacterium RIFOXYB12_FULL_58_9	1797899	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	6.51082	58	-	MGSX01	392	5749	4837	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314462	GCA_001798655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/655/GCA_001798655.1_ASM179865v1	27774985	-
Deltaproteobacteria bacterium RIFOXYC2_FULL_48_10	1797901	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.75365	46	-	MGSZ01	267	2972	1804	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314585	GCA_001798685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/685/GCA_001798685.1_ASM179868v1	27774985	-
Deltaproteobacteria bacterium RIFOXYB2_FULL_66_7	1797900	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.07677	60.6	-	MGSY01	943	1842	941	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316242	GCA_001798675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/675/GCA_001798675.1_ASM179867v1	27774985	-
Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_50_16	1797881	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.73456	49.1	-	MGSF01	90	1656	1468	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316063	GCA_001798715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/715/GCA_001798715.1_ASM179871v1	27774985	-
Deltaproteobacteria bacterium RIFOXYD12_FULL_53_23	1797903	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.37903	53	-	MGTB01	181	2308	2086	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314641	GCA_001798725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/725/GCA_001798725.1_ASM179872v1	27774985	-
Deltaproteobacteria bacterium RBG_13_47_9	1797826	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	3.1864	44.5	-	MGQC01	352	3106	1866	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314290	GCA_001798755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/755/GCA_001798755.1_ASM179875v1	27774985	-
Deltaproteobacteria bacterium RBG_13_52_11b	1797830	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.64746	50	-	MGQG01	187	2613	1768	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314283	GCA_001798765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/765/GCA_001798765.1_ASM179876v1	27774985	-
Deltaproteobacteria bacterium RBG_13_53_10	1797831	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	3.47248	50.2	-	MGQH01	298	3540	2121	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314291	GCA_001798785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/785/GCA_001798785.1_ASM179878v1	27774985	-
Deltaproteobacteria bacterium RBG_13_65_10	1797835	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.64735	63	-	MGQL01	156	2650	1809	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314016	GCA_001798805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/805/GCA_001798805.1_ASM179880v1	27774985	-
Deltaproteobacteria bacterium RBG_16_47_11	1797838	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	3.88796	45.7	-	MGQO01	330	4053	3158	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314278	GCA_001798835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/835/GCA_001798835.1_ASM179883v1	27774985	-
Deltaproteobacteria bacterium RBG_16_49_23	1797840	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	3.82537	49	-	MGQQ01	171	3669	3458	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313707	GCA_001798855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/855/GCA_001798855.1_ASM179885v1	27774985	-
Deltaproteobacteria bacterium RBG_16_55_12	1797844	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.31191	52.7	-	MGQU01	242	2513	1512	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313731	GCA_001798865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/865/GCA_001798865.1_ASM179886v1	27774985	-
Deltaproteobacteria bacterium RBG_16_64_85	1797846	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.20871	63.4	-	MGQW01	96	2204	2074	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314034	GCA_001798885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/885/GCA_001798885.1_ASM179888v1	27774985	-
Deltaproteobacteria bacterium RBG_19FT_COMBO_43_11	1797849	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.99214	42.5	-	MGQZ01	138	2080	1673	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314152	GCA_001798915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/915/GCA_001798915.1_ASM179891v1	27774985	-
Deltaproteobacteria bacterium RBG_19FT_COMBO_46_9	1797851	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.1131	42.4	-	MGRB01	109	1180	660	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314060	GCA_001798945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/945/GCA_001798945.1_ASM179894v1	27774985	-
Deltaproteobacteria bacterium RBG_19FT_COMBO_46_12	1797850	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	4.24735	43.2	-	MGRA01	442	4536	3070	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314147	GCA_001798935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/935/GCA_001798935.1_ASM179893v1	27774985	-
Deltaproteobacteria bacterium RBG_19FT_COMBO_56_10	1797853	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	0.81782	48.5	-	MGRD01	115	932	327	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313674	GCA_001798975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/975/GCA_001798975.1_ASM179897v1	27774985	-
Deltaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_60_17	1797865	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.71385	59.1	-	MGRP01	208	1763	1360	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315407	GCA_001798995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/798/995/GCA_001798995.1_ASM179899v1	27774985	-
Deltaproteobacteria bacterium RIFCSPLOWO2_01_44_7	1797869	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.60782	43.6	-	MGRT01	160	1736	1528	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313782	GCA_001799015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/015/GCA_001799015.1_ASM179901v1	27774985	-
Deltaproteobacteria bacterium RIFCSPLOWO2_01_FULL_42_9	1797871	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.61499	41.7	-	MGRV01	329	1785	1280	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315238	GCA_001799025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/025/GCA_001799025.1_ASM179902v1	27774985	-
Deltaproteobacteria bacterium RIFCSPLOWO2_02_56_12	1797874	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.52641	55.3	-	MGRY01	241	2591	2250	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313787	GCA_001799045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/045/GCA_001799045.1_ASM179904v1	27774985	-
Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_44_10	1797877	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.99983	44.1	-	MGSB01	60	2029	1814	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315993	GCA_001799065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/065/GCA_001799065.1_ASM179906v1	27774985	-
Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_44_34	1797878	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.22974	44	-	MGSC01	18	2232	2173	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316058	GCA_001799095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/095/GCA_001799095.1_ASM179909v1	27774985	-
Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_46_8	1797879	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.27244	45.3	-	MGSD01	120	1387	1064	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315930	GCA_001799115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/115/GCA_001799115.1_ASM179911v1	27774985	-
Deltaproteobacteria bacterium RIFCSPLOWO2_12_55_13	1797885	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.34118	55.1	-	MGSJ01	255	2405	2060	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313794	GCA_001799125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/125/GCA_001799125.1_ASM179912v1	27774985	-
Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_40_28	1797887	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.16216	39.3	-	MGSL01	33	2084	2016	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315820	GCA_001799145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/145/GCA_001799145.1_ASM179914v1	27774985	-
Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_43_16	1797889	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.31738	42.6	-	MGSN01	137	2318	2173	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315827	GCA_001799175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/175/GCA_001799175.1_ASM179917v1	27774985	-
Deltaproteobacteria bacterium RIFOXYA12_FULL_61_11	1797896	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	4.64109	60.5	-	MGSU01	342	3892	3409	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314405	GCA_001799195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/195/GCA_001799195.1_ASM179919v1	27774985	-
Deltaproteobacteria bacterium RIFOXYA2_FULL_55_11	1797898	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.46605	53.3	-	MGSW01	273	2594	1759	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314374	GCA_001799205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/205/GCA_001799205.1_ASM179920v1	27774985	-
Deltaproteobacteria bacterium RIFOXYD12_FULL_50_9	1797902	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	3.76924	49.7	-	MGTA01	274	3619	2763	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314632	GCA_001799225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/225/GCA_001799225.1_ASM179922v1	27774985	-
Deltaproteobacteria bacterium RIFOXYD12_FULL_55_16	1797904	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.46361	55.6	-	MGTC01	90	2264	2074	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314626	GCA_001799255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/255/GCA_001799255.1_ASM179925v1	27774985	-
Deltaproteobacteria bacterium RIFOXYD12_FULL_57_12	1797906	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	3.84073	56.5	-	MGTE01	126	3503	3029	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314642	GCA_001799275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/275/GCA_001799275.1_ASM179927v1	27774985	-
Deltaproteobacteria bacterium RIFOXYD12_FULL_56_24	1797905	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	3.03638	56.4	-	MGTD01	67	2728	2628	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314633	GCA_001799285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/285/GCA_001799285.1_ASM179928v1	27774985	-
Deltaproteobacteria bacterium RIFOXYD2_FULL_66_9	1797907	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.90472	62.7	-	MGTF01	536	1948	969	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314712	GCA_001799305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/305/GCA_001799305.1_ASM179930v1	27774985	-
Desulfobacca sp. RBG_16_58_9	1797908	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.42748	56.9	-	MGTG01	186	1504	744	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316211	GCA_001799325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/325/GCA_001799325.1_ASM179932v1	27774985	-
Flavobacterium piscis	1114874	PRJNA315782	315782	FCB group	Bacteroidetes/Chlorobi group	5.90456	34.1	-	LVEN01	51	5009	4898	7/18/16	4/13/17	Contig	Korea University	SAMN04570197	GCA_001686925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/925/GCA_001686925.1_ASM168692v1	-	CCUG 60099
Acidiferrobacter thiooxydans	163359	PRJNA324464	324464	Proteobacteria	Gammaproteobacteria	3.25282	63.6	-	MDCF01	257	3132	2904	8/15/16	4/17/17	Contig	Central South University	SAMN05526184	GCA_001705075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/075/GCA_001705075.1_ASM170507v1	-	ZJ
Bifidobacterium breve 12L	1385938	PRJNA214949	214949	Terrabacteria group	Actinobacteria	2.24462	58.9	chromosome:NZ_CP006711.1/CP006711.1	-	1	1968	1820	2/14/14	4/2/17	Complete Genome	University of Parma	SAMN03081478	GCA_000568955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/955/GCA_000568955.1_ASM56895v1	-	12L
Pseudomonas graminis	158627	PRJNA328206	328206	Proteobacteria	Gammaproteobacteria	5.95789	60.2	-	MDEN01	71	5305	5097	8/15/16	4/13/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN05366371	GCA_001705435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/435/GCA_001705435.1_ASM170543v1	-	UASWS1507
Mameliella alba	561184	PRJEB15721	347694	Proteobacteria	Alphaproteobacteria	5.25833	65.2	-	FMZI01	36	5106	4951	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216376	GCA_900101505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/505/GCA_900101505.1_IMG-taxon_2663762746_annotated_assembly	-	CGMCC 1.7290
Fortiea contorta PCC 7126	643473	PRJNA158817	158817	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.74226	42.2	-	ANFJ01	3	5260	4945	1/18/13	5/19/17	Scaffold	JGI	SAMN02261254	GCA_000332295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/295/GCA_000332295.1_ASM33229v1	23277585	PCC 7126
Corynebacterium argentoratense DSM 44202	1348662	PRJNA209048	209048	Terrabacteria group	Actinobacteria	2.0319	58.9	chromosome:NC_022198.1/CP006365.1	-	1	1907	1812	8/27/13	4/9/17	Complete Genome	Bielefeld University	SAMN02603032	GCA_000590555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/555/GCA_000590555.1_ASM59055v1	24092787	DSM 44202
Serratia marcescens FGI94	1249634	PRJNA178957	178957	Proteobacteria	Gammaproteobacteria	4.85822	58.9	chromosome:NC_020064.1/CP003942.1	-	1	4540	4363	1/3/13	3/23/17	Complete Genome	UW-Madison	SAMN02604288	GCA_000330865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/865/GCA_000330865.1_ASM33086v1	23516234	FGI94
Methyloligella halotolerans	1177755	PRJNA319928	319928	Proteobacteria	Alphaproteobacteria	3.19163	63.6	-	MASI01	26	3072	2790	8/19/16	4/13/17	Contig	G.K.Skryabin IBPM PAS	SAMN04915608	GCA_001708935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/935/GCA_001708935.1_Meth_hal_C2_1.0	-	VKM B-2706
Candidatus Thiodiazotropha endoloripes	1818881	PRJNA314435	314435	Proteobacteria	Gammaproteobacteria	4.50308	52	-	LVJZ01	10	4049	3961	8/23/16	4/13/17	Contig	University of Vienna	SAMN04574144	GCA_001708975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/975/GCA_001708975.1_ASM170897v1	27775707	-
Pasteurellaceae bacterium NI1060	1679001	PRJNA288779	288779	Proteobacteria	Gammaproteobacteria	2.55408	40.3	chromosome:NZ_CP013830.1/CP013830.1	-	1	2449	2289	8/25/16	4/13/17	Chromosome	Vrije Universiteit Brussel	SAMN03801592	GCA_001712855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/855/GCA_001712855.1_ASM171285v1	27409077	-
Bacillus bingmayongensis	1150157	PRJNA161659	161659	Terrabacteria group	Firmicutes	5.4771	35.5	-	AKCS01	63	5726	5196	9/21/12	6/15/17	Scaffold	"Fujian Academy of Agriculture Sciences, China"	SAMN02469796	GCA_000299035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/035/GCA_000299035.1_ASM29903v1	23144388	FJAT-13831
Jiangella alba	561176	PRJNA326298	326298	Terrabacteria group	Actinobacteria	7.66486	72.8	-	MBFJ01	33	6906	6720	8/19/16	4/13/17	Scaffold	Sun Yat-sen University	SAMN05275832	GCA_001708125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/125/GCA_001708125.1_ASM170812v1	-	YIM 61503
Micromonospora saelicesensis	285676	PRJEB14522	326373	Terrabacteria group	Actinobacteria	7.10399	71.2	-	FMCR01	11	6578	6358	8/15/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488521	GCA_900091575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/575/GCA_900091575.1_IMG-taxon_2622736537_annotated_assembly	-	DSM 44871
Micromonospora matsumotoense	121616	PRJEB14520	326374	Terrabacteria group	Actinobacteria	7.75558	72.3	-	FMCU01	57	6694	6296	8/15/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488017	GCA_900091525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/525/GCA_900091525.1_IMG-taxon_2622736591_annotated_assembly	-	DSM 44100
Micromonospora chaiyaphumensis	307119	PRJEB14515	326386	Terrabacteria group	Actinobacteria	6.74381	73.5	-	FMCS01	23	6251	6019	8/15/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488014	GCA_900091435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/435/GCA_900091435.1_IMG-taxon_2622736432_annotated_assembly	-	DSM 45246
Micromonospora marina	307120	PRJEB14527	326375	Terrabacteria group	Actinobacteria	6.0606	72.8	-	FMCV01	74	5549	5176	8/15/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488016	GCA_900091565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/565/GCA_900091565.1_IMG-taxon_2622736534_annotated_assembly	-	DSM 45555
Micromonospora tulbaghiae	479978	PRJEB14524	326371	Terrabacteria group	Actinobacteria	6.48817	73	-	FMCQ01	19	5971	5793	8/15/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488088	GCA_900091605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/605/GCA_900091605.1_IMG-taxon_2622736612_annotated_assembly	-	DSM 45142
Micromonospora mirobrigensis	262898	PRJEB14521	326372	Terrabacteria group	Actinobacteria	6.16872	73.3	-	FMCX01	22	5740	5524	8/15/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488520	GCA_900091555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/555/GCA_900091555.1_IMG-taxon_2619619047_annotated_assembly	-	DSM 44830
Micromonospora haikouensis	686309	PRJEB14526	326377	Terrabacteria group	Actinobacteria	7.58139	73.8	-	FMCW01	97	6525	6122	8/15/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488110	GCA_900091595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/595/GCA_900091595.1_IMG-taxon_2622736584_annotated_assembly	-	DSM 45626
Micromonospora halophytica	47864	PRJEB14464	326086	Terrabacteria group	Actinobacteria	6.27588	72.9	-	FMDN01	64	5589	5275	8/16/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488080	GCA_900090245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/090/245/GCA_900090245.1_IMG-taxon_2622736531_annotated_assembly	-	DSM 43171
Micromonospora humi	745366	PRJEB14439	325916	Terrabacteria group	Actinobacteria	6.66259	73.6	-	FMDM01	37	6177	5874	8/16/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488015	GCA_900090105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/090/105/GCA_900090105.1_IMG-taxon_2622736513_annotated_assembly	-	DSM 45647
Micromonospora chersina	47854	PRJEB14510	326380	Terrabacteria group	Actinobacteria	6.68369	73.6	-	FMIB01	2	6207	5994	8/18/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488485	GCA_900091475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/475/GCA_900091475.1_IMG-taxon_2623620611_annotated_assembly	-	DSM 44151
Micromonospora nigra	145857	PRJEB14525	326376	Terrabacteria group	Actinobacteria	6.36376	72.6	-	FMHT01	3	5469	5216	8/18/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488480	GCA_900091585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/585/GCA_900091585.1_IMG-taxon_2619619644_annotated_assembly	-	DSM 43818
Micromonospora citrea	47855	PRJEB14462	326088	Terrabacteria group	Actinobacteria	7.209	73.8	-	FMHZ01	2	6350	6045	8/18/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488296	GCA_900090315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/090/315/GCA_900090315.1_IMG-taxon_2623620569_annotated_assembly	-	DSM 43903
Micromonospora yangpuensis	683228	PRJEB14523	326370	Terrabacteria group	Actinobacteria	6.5243	72	-	FMIA01	2	5896	5571	8/18/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488481	GCA_900091615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/615/GCA_900091615.1_IMG-taxon_2623620524_annotated_assembly	-	DSM 45577
Micromonospora peucetia	47871	PRJEB14519	326382	Terrabacteria group	Actinobacteria	7.36577	72.3	-	FMIC01	2	6354	6062	8/18/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488357	GCA_900091625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/625/GCA_900091625.1_IMG-taxon_2622736606_annotated_assembly	-	DSM 43363
Micromonospora rhizosphaerae	568872	PRJEB14514	326385	Terrabacteria group	Actinobacteria	7.18158	71.6	-	FMHV01	3	6745	6302	8/18/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488360	GCA_900091465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/465/GCA_900091465.1_IMG-taxon_2622736626_annotated_assembly	-	DSM 45431
Micromonospora eburnea	227316	PRJEB14470	326080	Terrabacteria group	Actinobacteria	7.18537	72.1	-	FMHY01	2	6306	5996	8/18/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488247	GCA_900090225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/090/225/GCA_900090225.1_IMG-taxon_2622736604_annotated_assembly	-	DSM 44814
Micromonospora inyonensis	47866	PRJEB14512	326378	Terrabacteria group	Actinobacteria	6.92397	71.9	-	FMHU01	4	6118	5645	8/18/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04489817	GCA_900091415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/415/GCA_900091415.1_IMG-taxon_2636415978_annotated_assembly	-	DSM 46123
Micromonospora pallida	145854	PRJEB14471	326078	Terrabacteria group	Actinobacteria	7.76283	71.9	-	FMHW01	4	6735	6272	8/18/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04489814	GCA_900090325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/090/325/GCA_900090325.1_IMG-taxon_2636415968_annotated_assembly	-	DSM 43817
Terasakiella sp. PR1	1867952	PRJEB14583	339805	Proteobacteria	Alphaproteobacteria	3.68756	46	-	FLYE01	48	3534	3409	8/25/16	4/13/17	Contig	CNRS	SAMEA4346298	GCA_900093605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/605/GCA_900093605.1_Terasakiella_magnetica_strain_PR1	-	-
Desulfobulbus propionicus DSM 2032	577650	PRJNA32993	32993	Proteobacteria	delta/epsilon subdivisions	3.85187	58.9	chromosome:NC_014972.1/CP002364.1	-	1	3392	3300	1/27/11	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713581	GCA_000186885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/885/GCA_000186885.1_ASM18688v1	21475592	DSM 2032
Acidithiobacillus ferrooxidans ATCC 53993	380394	PRJNA16689	16689	Proteobacteria	Acidithiobacillia	2.88504	58.9	chromosome:NC_011206.1/CP001132.1	-	1	2926	2779	9/5/08	3/30/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598372	GCA_000020825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/825/GCA_000020825.1_ASM2082v1	-	ATCC 53993
Rhodoferax antarcticus	81479	PRJNA356916	356916	Proteobacteria	Betaproteobacteria	4.05544	58.871	chromosome:NZ_CP019240.1/CP019240.1; plasmid unnamed1:NZ_CP019241.1/CP019241.1; plasmid unnamed2:NZ_CP019242.1/CP019242.1	-	3	3921	3680	1/18/17	4/16/17	Complete Genome	Korea University	SAMN06118137	GCA_001955735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/735/GCA_001955735.1_ASM195573v1	-	DSM 24876
Pelagibacteraceae bacterium ETNP-OMZ-SAG-E4	1891189	PRJNA290513	290513	Proteobacteria	Alphaproteobacteria	0.381935	31.6	-	MDKL01	100	426	352	9/5/16	4/13/17	Contig	Georgia Institute of Technology	SAMN03893478	GCA_001719245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/245/GCA_001719245.1_ASM171924v1	27487207	-
Pelagibacteraceae bacterium ETNP-OMZ-SAG-E5	1891188	PRJNA290513	290513	Proteobacteria	Alphaproteobacteria	0.392247	31.3	-	MDKK01	84	431	375	9/5/16	4/13/17	Contig	Georgia Institute of Technology	SAMN03893479	GCA_001719255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/255/GCA_001719255.1_ASM171925v1	27487207	-
Pelagibacteraceae bacterium ETNP-OMZ-SAG-E3	1891190	PRJNA290513	290513	Proteobacteria	Alphaproteobacteria	0.176608	31.4	-	MDKM01	65	-	-	9/5/16	9/5/16	Contig	Georgia Institute of Technology	SAMN03893477	GCA_001719265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/265/GCA_001719265.1_ASM171926v1	27487207	-
Pelagibacteraceae bacterium ETNP-OMZ-SAG-D10	1891192	PRJNA290513	290513	Proteobacteria	Alphaproteobacteria	0.28799	31.2	-	MDKO01	148	-	-	9/5/16	9/5/16	Contig	Georgia Institute of Technology	SAMN03893475	GCA_001719315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/315/GCA_001719315.1_ASM171931v1	27487207	-
Pelagibacteraceae bacterium ETNP-OMZ-SAG-D9	1891193	PRJNA290513	290513	Proteobacteria	Alphaproteobacteria	0.459768	30.7	-	MDKP01	119	521	433	9/5/16	4/13/17	Contig	Georgia Institute of Technology	SAMN03893474	GCA_001719325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/325/GCA_001719325.1_ASM171932v1	27487207	-
Pelagibacteraceae bacterium ETNP-OMZ-SAG-E2	1891191	PRJNA290513	290513	Proteobacteria	Alphaproteobacteria	0.376244	30.5	-	MDKN01	108	434	342	9/5/16	4/13/17	Contig	Georgia Institute of Technology	SAMN03893476	GCA_001719355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/355/GCA_001719355.1_ASM171935v1	27487207	-
Pelagibacteraceae bacterium ETNP-OMZ-SAG-D3	1891194	PRJNA290513	290513	Proteobacteria	Alphaproteobacteria	0.149212	31.9	-	MDKQ01	76	-	-	9/5/16	9/5/16	Contig	Georgia Institute of Technology	SAMN03893473	GCA_001719375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/375/GCA_001719375.1_ASM171937v1	27487207	-
Pelagibacteraceae bacterium ETNP-OMZ-SAG-B1	1891198	PRJNA290513	290513	Proteobacteria	Alphaproteobacteria	0.385868	29.2	-	MDKU01	205	-	-	9/5/16	9/5/16	Contig	Georgia Institute of Technology	SAMN03893469	GCA_001719405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/405/GCA_001719405.1_ASM171940v1	27487207	-
Pelagibacteraceae bacterium ETNP-OMZ-SAG-B2	1891197	PRJNA290513	290513	Proteobacteria	Alphaproteobacteria	0.540421	30.4	-	MDKT01	134	623	516	9/5/16	4/13/17	Contig	Georgia Institute of Technology	SAMN03893470	GCA_001719415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/415/GCA_001719415.1_ASM171941v1	27487207	-
Pelagibacteraceae bacterium ETNP-OMZ-SAG-B4	1891195	PRJNA290513	290513	Proteobacteria	Alphaproteobacteria	0.181687	27	-	MDKR01	91	-	-	9/5/16	9/5/16	Contig	Georgia Institute of Technology	SAMN03893472	GCA_001719445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/445/GCA_001719445.1_ASM171944v1	27487207	-
Pelagibacteraceae bacterium ETNP-OMZ-SAG-A8	1891200	PRJNA290513	290513	Proteobacteria	Alphaproteobacteria	0.170771	32.2	-	MDKW01	83	-	-	9/5/16	9/5/16	Contig	Georgia Institute of Technology	SAMN03893467	GCA_001719465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/465/GCA_001719465.1_ASM171946v1	27487207	-
Pelagibacteraceae bacterium ETNP-OMZ-SAG-A10	1891199	PRJNA290513	290513	Proteobacteria	Alphaproteobacteria	0.346171	30.3	-	MDKV01	125	414	320	9/5/16	4/13/17	Contig	Georgia Institute of Technology	SAMN03893468	GCA_001719475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/475/GCA_001719475.1_ASM171947v1	27487207	-
Pelagibacteraceae bacterium ETNP-OMZ-SAG-A6	1891202	PRJNA290513	290513	Proteobacteria	Alphaproteobacteria	0.551754	31.8	-	MDKY01	147	646	534	9/5/16	4/13/17	Contig	Georgia Institute of Technology	SAMN03893465	GCA_001719505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/505/GCA_001719505.1_ASM171950v1	27487207	-
Pelagibacteraceae bacterium ETNP-OMZ-SAG-B3	1891196	PRJNA290513	290513	Proteobacteria	Alphaproteobacteria	0.39353	31.2	-	MDKS01	142	468	362	9/5/16	4/13/17	Contig	Georgia Institute of Technology	SAMN03893471	GCA_001719525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/525/GCA_001719525.1_ASM171952v1	27487207	-
Pelagibacteraceae bacterium ETNP-OMZ-SAG-A7	1891201	PRJNA290513	290513	Proteobacteria	Alphaproteobacteria	0.213493	33.4	-	MDKX01	53	251	206	9/5/16	4/21/17	Contig	Georgia Institute of Technology	SAMN03893466	GCA_001719545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/545/GCA_001719545.1_ASM171954v1	27487207	-
Rhodobacteraceae bacterium CY02	1892596	PRJNA339194	339194	Proteobacteria	Alphaproteobacteria	3.86396	57.5	-	MDVX01	73	3674	3548	9/6/16	4/13/17	Contig	Qingdao Agricultural University	SAMN05582966	GCA_001719615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/615/GCA_001719615.1_ASM171961v1	-	CY02
Methylobrevis pamukkalensis	1439726	PRJNA319928	319928	Proteobacteria	Alphaproteobacteria	4.38069	68.9	-	MCRJ01	348	4102	3229	9/6/16	4/13/17	Contig	G.K.Skryabin IBPM PAS	SAMN04912030	GCA_001720135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/135/GCA_001720135.1_MpPK2_01	-	PK2
Methylophaga muralis	291169	PRJNA319928	319928	Proteobacteria	Gammaproteobacteria	2.84692	44.7	-	MCRI01	130	2785	2585	9/6/16	4/17/17	Contig	G.K.Skryabin IBPM PAS	SAMN05178898	GCA_001720165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/165/GCA_001720165.1_MmBur1_1.0	-	Bur 1
Rhodobacter johrii	445629	PRJNA323784	323784	Proteobacteria	Alphaproteobacteria	4.51211	69.1	-	MABH01	257	4458	4093	9/1/16	4/17/17	Contig	UoH	SAMN05188776	GCA_001720585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/585/GCA_001720585.1_ASM172058v1	-	JA192
Pseudomonas frederiksbergensis	104087	PRJNA343270	343270	Proteobacteria	Gammaproteobacteria	6.20871	58.8644	chromosome:NZ_CP018319.1/CP018319.1; plasmid unnamed:NZ_CP018320.1/CP018320.1	-	2	5851	5580	1/17/17	4/17/17	Complete Genome	Korea University	SAMN06102480	GCA_001952935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/935/GCA_001952935.1_ASM195293v1	-	AS1
Labrenzia aggregata	187304	PRJNA369708	369708	Proteobacteria	Alphaproteobacteria	6.65099	58.8635	chromosome:NZ_CP019630.1/CP019630.1; plasmid unnamed1:NZ_CP019631.1/CP019631.1; plasmid unnamed2:NZ_CP019632.1/CP019632.1	-	3	6147	6037	2/14/17	4/17/17	Complete Genome	Chung-Ang University	SAMN06292063	GCA_001999245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/245/GCA_001999245.1_ASM199924v1	-	RMAR6-6
Terasakiispira papahanaumokuakeensis	197479	PRJNA339315	339315	Proteobacteria	Gammaproteobacteria	4.04803	51.3	-	MDTQ01	2	3537	3430	8/23/16	4/17/17	Scaffold	University of Hawaii at Manoa	SAMN05589748	GCA_001709345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/345/GCA_001709345.1_ASM170934v1	-	PH27A
Bacillus luciferensis	178774	PRJNA335414	335414	Terrabacteria group	Firmicutes	4.89412	32.9	-	MDKC01	37	4612	4471	8/24/16	4/17/17	Contig	University of North Carolina Chapel Hill	SAMN05441567	GCA_001712755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/755/GCA_001712755.1_ASM171275v1	-	CH01
Rhodohalobacter halophilus	1812810	PRJNA339652	339652	Balneolaeota	Balneolia	3.12272	44.4	-	MDWE01	92	2779	2681	8/29/16	5/31/17	Contig	Shandong University at Weihai	SAMN05601511	GCA_001715195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/195/GCA_001715195.1_ASM171519v1	-	JZ3C29
Gammaproteobacteria bacterium 2W06	1838287	PRJNA319162	319162	Proteobacteria	Gammaproteobacteria	0.832755	64.7	-	MDVM01	83	794	753	8/29/16	4/13/17	Contig	Shandong University at Weihai	SAMN04880645	GCA_001715285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/285/GCA_001715285.1_ASM171528v1	-	2W06
Granulibacter bethesdensis	364410	PRJNA347348	347348	Proteobacteria	Alphaproteobacteria	2.70831	58.8	chromosome:NZ_CP018193.1/CP018193.1	-	1	2434	2358	12/6/16	8/31/17	Complete Genome	"Igenbio, Inc"	SAMN05879420	GCA_001889445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/445/GCA_001889445.1_ASM188944v1	-	NIH7.1
Candidatus Thiodiazotropha endolucinida	1655433	PRJNA284177	284177	Proteobacteria	Gammaproteobacteria	4.48999	52.6	-	MARB01	55	4105	3979	8/29/16	4/13/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03435122	GCA_001715975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/975/GCA_001715975.1_ASM171597v1	27775698	COS
Candidatus Methanomethylicus oleusabulum	1867260	PRJNA321438	321438	TACK group	Candidatus Verstraetearchaeota	1.37448	55.4	-	MAGU01	86	-	-	8/30/16	10/11/16	Scaffold	University of Queensland	SAMN04994460	GCA_001717025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/025/GCA_001717025.1_ASM171702v1	27694807	-
Candidatus Methanosuratus petracarbonis	1867261	PRJNA321438	321438	TACK group	Candidatus Verstraetearchaeota	1.26855	55.4	-	MAGV01	84	-	-	8/30/16	10/11/16	Scaffold	University of Queensland	SAMN04994461	GCA_001717015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/015/GCA_001717015.1_ASM171701v1	27694807	-
Eisenbergiella tayi	1432052	PRJNA335591	335591	Terrabacteria group	Firmicutes	7.1484	46.9	-	MCGH01	5	6156	5950	8/30/16	4/5/17	Scaffold	Public Health Agency of Canada	SAMN05449646	GCA_001717135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/135/GCA_001717135.1_ASM171713v1	-	NML 110608
Marinobacterium aestuarii	1821621	PRJNA320435	320435	Proteobacteria	Gammaproteobacteria	5.19161	58.8	chromosome:NZ_CP015839.1/CP015839.1	-	1	4605	4445	5/25/16	4/17/17	Complete Genome	National Marine Biodiversity Institute of Korea	SAMN04939310	GCA_001651805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/805/GCA_001651805.1_ASM165180v1	-	ST58-10
Pseudomonas fluorescens	294	PRJNA295937	295937	Proteobacteria	Gammaproteobacteria	6.39187	58.8	chromosome:NZ_CP012830.1/CP012830.1	-	1	6029	5785	10/6/15	4/4/17	Complete Genome	Lawrence Berkeley National Laboratory	SAMN04094105	GCA_001307155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/155/GCA_001307155.1_ASM130715v1	-	FW300-N2E3
Edwardsiella sp. LADL05-105	1650654	PRJNA282827	282827	Proteobacteria	Gammaproteobacteria	4.14204	58.8	chromosome:NZ_CP011516.1/CP011516.1	-	1	3819	3249	7/23/15	4/21/17	Complete Genome	Mississippi State University	SAMN03580086	GCA_001186215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/215/GCA_001186215.1_ASM118621v1	26337892	LADL05-105
Paenibacillus oryzae	1844972	PRJNA320665	320665	Terrabacteria group	Firmicutes	5.90597	49.5	-	LYPA01	80	5164	5025	6/21/16	4/13/17	Scaffold	Chinese Academy of agricultural Sciences(CAAS)	SAMN04954875	GCA_001675045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/045/GCA_001675045.1_ASM167504v1	-	1DrF-4
Orenia metallireducens	1413210	PRJNA224770	224770	Terrabacteria group	Firmicutes	3.46599	32.4	-	LWDV01	12	3234	3089	7/26/16	4/13/17	Scaffold	"University of Illinois, Urbana-Champaign"	SAMN04623222	GCA_001693735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/735/GCA_001693735.1_ASM169373v1	-	Z6
Mycobacterium intermedium	28445	PRJNA354248	354248	Terrabacteria group	Actinobacteria	6.81797	65.8	-	MVHT01	384	6064	5686	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064242	GCA_002086275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/275/GCA_002086275.1_ASM208627v1	-	DSM 44049
Streptomyces rubidus	310780	PRJEB16923	351043	Terrabacteria group	Actinobacteria	9.00571	72.9	-	FODD01	112	7770	7379	10/29/16	3/14/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216267	GCA_900110255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/255/GCA_900110255.1_IMG-taxon_2671180039_annotated_assembly	-	CGMCC 4.2026
Candidatus Methanomethylicus mesodigestum	1867258	PRJNA321438	321438	TACK group	Candidatus Verstraetearchaeota	1.42806	57.6	-	MAGS01	88	-	-	8/30/16	10/11/16	Scaffold	University of Queensland	SAMN04994458	GCA_001717005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/005/GCA_001717005.1_ASM171700v1	27694807	-
Mycobacterium flavescens	1776	PRJNA338014	338014	Terrabacteria group	Actinobacteria	5.97342	68.5	-	MIHA01	72	5813	5599	9/9/16	4/17/17	Scaffold	UW	SAMN05729960	GCA_001722335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/335/GCA_001722335.1_ASM172233v1	-	M6
Mycobacterium sherrisii	243061	PRJNA299467	299467	Terrabacteria group	Actinobacteria	5.56217	67	-	LQPT01	128	5242	4956	4/20/17	4/22/17	Contig	University of Trento	SAMN04216950	GCA_002102355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/355/GCA_002102355.1_ASM210235v1	-	ATCC BAA-832
Mycobacterium triviale	1798	PRJNA299467	299467	Terrabacteria group	Actinobacteria	3.59108	70.3	-	LQPZ01	57	3445	3318	4/20/17	4/22/17	Contig	University of Trento	SAMN04216956	GCA_002102395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/395/GCA_002102395.1_ASM210239v1	-	DSM 44153
Mycobacterium porcinum	39693	PRJNA338014	338014	Terrabacteria group	Actinobacteria	6.9306	66.7	-	MIHF01	557	7015	6185	9/9/16	4/13/17	Contig	UW	SAMN05730077	GCA_001722425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/425/GCA_001722425.1_ASM172242v1	-	HMC_M12
Methyloceanibacter methanicus	1774968	PRJNA305568	305568	Proteobacteria	Alphaproteobacteria	3.13902	64	-	LPWG01	14	3121	2767	9/12/16	4/13/17	Contig	Ghent University	SAMN04328993	GCA_001723285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/285/GCA_001723285.1_ASM172328v1	27501305	R-67174
Methyloceanibacter superfactus	1774969	PRJNA305568	305568	Proteobacteria	Alphaproteobacteria	3.1001	64.5	-	LPWF01	38	3187	2696	9/12/16	4/13/17	Contig	Ghent University	SAMN04328994	GCA_001723305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/305/GCA_001723305.1_ASM172330v1	27501305	R-67175
Methyloceanibacter marginalis	1774971	PRJNA305568	305568	Proteobacteria	Alphaproteobacteria	2.99742	63.5	-	LPWD01	470	3391	2575	9/12/16	4/13/17	Contig	Ghent University	SAMN04328996	GCA_001723295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/295/GCA_001723295.1_ASM172329v1	27501305	R-67177
Methyloceanibacter stevinii	1774970	PRJNA305568	305568	Proteobacteria	Alphaproteobacteria	3.2161	63.1	-	LPWE01	14	3193	2823	9/12/16	4/13/17	Contig	Ghent University	SAMN04328995	GCA_001723355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/355/GCA_001723355.1_ASM172335v1	27501305	R-67176
Granulibacter bethesdensis	364410	PRJNA68647	68647	Proteobacteria	Alphaproteobacteria	2.72181	58.8	chromosome:NZ_CP003181.2/CP003181.2	-	1	2466	2395	2/20/14	9/4/17	Complete Genome	Integrated Genomics	SAMN03081433	GCA_000576085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/085/GCA_000576085.2_ASM57608v2	-	NIH3.1
Frankia elaeagni	222534	PRJNA170084	170084	Terrabacteria group	Actinobacteria	7.58931	71.7	-	ARFH01	135	6234	5760	4/19/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440438	GCA_000374165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/165/GCA_000374165.1_ASM37416v1	23846272	BMG5.12
Candidatus Endobugula sertula	62101	PRJNA322176	322176	Proteobacteria	Gammaproteobacteria	3.35035	41.6	-	MDLC01	112	3002	2850	9/13/16	9/13/16	Scaffold	University of Wisconsin - Madison	SAMN03766367	GCA_001723645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/645/GCA_001723645.1_AB1_endobugula	27590822	-
Candidatus Marithrix sp. Canyon 246	1827136	PRJNA322859	322859	Proteobacteria	Gammaproteobacteria	3.21713	34	-	MCBW01	66	3262	3077	9/13/16	4/13/17	Contig	Max Planck Institute for Marine Microbiology	SAMN05176313	GCA_001723665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/665/GCA_001723665.1_ASM172366v1	27536274	-
Helicobacter jaachi	1677920	PRJNA261711	261711	Proteobacteria	delta/epsilon subdivisions	1.9051	41	-	JRPR01	140	1895	1772	10/3/14	4/9/17	Contig	Massachusetts Institute of Technology	SAMN03075561	GCA_000763135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/135/GCA_000763135.1_ASM76313v1	-	MIT 09-6949
Streptomyces malaysiense	1428626	PRJNA278503	278503	Terrabacteria group	Actinobacteria	7.96333	72.2	-	LBDA02	235	7108	6684	4/24/15	3/14/17	Contig	University of Malaya	SAMN03445833	GCA_000980885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/885/GCA_000980885.2_ASM98088v2	-	MUSC 136
Enterococcus massiliensis	1640685	PRJEB9522	285769	Terrabacteria group	Firmicutes	2.71284	39.6	-	CVRN01	7	2665	2550	6/4/15	4/10/17	Contig	URMITE	SAMEA3443460	GCA_001050095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/095/GCA_001050095.1_Enterococcus_massiliensis	-	AM1
Kurthia senegalensis	1033740	PRJEA70835	70835	Terrabacteria group	Firmicutes	2.98677	38.2	-	CAEW01	43	2973	2758	2/28/12	4/24/17	Scaffold	laboratoire URMITE CNRS 6236	SAMEA2272665	GCA_000285595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/595/GCA_000285595.1_ASM28559v1	-	type strain: JC8E
Vibrio barjaei	1676683	PRJNA300394	300394	Proteobacteria	Gammaproteobacteria	5.53513	44.2	-	LQXO02	64	5098	4967	4/30/16	4/13/17	Scaffold	University of Santiago de Compostela	SAMN04221167	GCA_001639065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/065/GCA_001639065.2_ASM163906v2	-	3062
Caldilinea aerophila DSM 14535 = NBRC 104270	926550	PRJDB47	82989	Terrabacteria group	Chloroflexi	5.14487	58.8	chromosome:NC_017079.1/AP012337.1	-	1	4160	4038	3/29/12	4/17/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00061033	GCA_000281175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/175/GCA_000281175.1_ASM28117v1	-	DSM 14535
Olavius algarvensis Delta 4 endosymbiont	260707	PRJNA17779	17779	Proteobacteria	delta/epsilon subdivisions	6.99672	51.4	-	AASZ01	172	-	-	10/3/06	9/20/16	Scaffold	DOE Joint Genome Institute	SAMN02954240	GCA_001735855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/735/855/GCA_001735855.1_ASM173585v1	16980956	-
Olavius algarvensis Delta 1 endosymbiont	334747	PRJNA17779	17779	Proteobacteria	delta/epsilon subdivisions	14.6629	49.6	-	AASZ01	226	-	-	10/3/06	9/20/16	Scaffold	DOE Joint Genome Institute	SAMN02954240	GCA_001735875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/735/875/GCA_001735875.1_ASM173587v1	16980956	-
Olavius algarvensis Gamma 3 endosymbiont	260704	PRJNA17779	17779	Proteobacteria	Gammaproteobacteria	4.87265	54.5	-	AASZ01	22	-	-	10/3/06	9/20/16	Scaffold	DOE Joint Genome Institute	SAMN02954240	GCA_001735895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/735/895/GCA_001735895.1_ASM173589v1	16980956	-
Olavius algarvensis Gamma 1 endosymbiont	260705	PRJNA17779	17779	Proteobacteria	Gammaproteobacteria	3.85092	51.7	-	AASZ01	91	-	-	10/3/06	9/20/16	Scaffold	DOE Joint Genome Institute	SAMN02954240	GCA_001735915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/735/915/GCA_001735915.1_ASM173591v1	16980956	-
Enterococcus rivorum	762845	PRJNA330680	330680	Terrabacteria group	Firmicutes	3.80635	34.9	-	MIEK01	81	3585	3432	9/22/16	4/17/17	Contig	CDC	SAMN05420592	GCA_001742285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/285/GCA_001742285.1_ASM174228v1	-	LMG 25899
Desulfuribacillus stibiiarsenatis	1390249	PRJNA343013	343013	Terrabacteria group	Firmicutes	3.1197	38.2	-	MJAT01	40	3076	2935	9/22/16	4/13/17	Contig	University of Georgia	SAMN05771867	GCA_001742305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/305/GCA_001742305.1_ASM174230v1	-	MLFW-2
Bacillus solimangrovi	1305675	PRJNA338213	338213	Terrabacteria group	Firmicutes	3.84402	35.2	-	MJEH01	64	3669	3555	9/23/16	4/13/17	Scaffold	Korea Research Institute Bioscience and Biotechnology	SAMN05526266	GCA_001742425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/425/GCA_001742425.1_ASM174242v1	-	GH2-4
Candidatus Altiarchaeales archaeon IMC4	1878999	PRJEB6121	263889	Euryarchaeota	unclassified Euryarchaeota	1.39091	47.9	-	MCBF01	1	1466	1328	9/13/16	9/13/16	Scaffold	UNIVERSITY OF REGENSBURG	SAMN05386354	GCA_001742785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/785/GCA_001742785.1_ASM174278v1	2014	-
Pantoea conspicua	472705	PRJNA252986	252986	Proteobacteria	Gammaproteobacteria	4.30886	55.6	-	MLFN01	128	4104	3616	4/18/17	8/4/17	Contig	University of Pretoria	SAMN05757366	GCA_002095315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/315/GCA_002095315.1_ASM209531v1	28255640	LMG 24534
Candidatus Altiarchaeales archaeon WOR_SM1_86-2	1849364	PRJNA270657	270657	Euryarchaeota	unclassified Euryarchaeota	2.08797	40.8	-	MCBC01	170	2247	2066	9/13/16	9/13/16	Contig	University of Texas	SAMN04980912	GCA_001723855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/855/GCA_001723855.1_ASM172385v1	27547202	-
Candidatus Altiarchaeales archaeon WOR_SM1_SCG	1849261	PRJNA321288	321288	Euryarchaeota	unclassified Euryarchaeota	2.54974	37.1	-	MCBE01	300	2389	2176	9/13/16	9/13/16	Scaffold	University of Tennessee	SAMN04979179	GCA_001723845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/845/GCA_001723845.1_ASM172384v1	2014	-
Candidatus Altiarchaeales archaeon WOR_SM1_79	1849365	PRJNA270657	270657	Euryarchaeota	unclassified Euryarchaeota	3.18802	39.8	-	MCBD01	332	3095	2705	9/13/16	9/13/16	Scaffold	University of Texas	SAMN04979201	GCA_001723835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/835/GCA_001723835.1_ASM172383v1	27547202	-
Acidobacteria bacterium SCN 69-37	1660160	PRJNA279279	279279	Acidobacteria	unclassified Acidobacteria	4.43272	68.5	-	MEDJ01	25	3900	3785	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652429	GCA_001724025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/025/GCA_001724025.1_ASM172402v1	26031303	-
Cytophagaceae bacterium SCN 52-12	1660162	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	5.12038	52.2	-	MEDT01	274	4246	3911	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652439	GCA_001724175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/175/GCA_001724175.1_ASM172417v1	26031303	-
Gemmatimonadetes bacterium SCN 70-22	1660163	PRJNA279279	279279	FCB group	Gemmatimonadetes	4.69747	70.2	-	MEDZ01	84	3938	3806	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652445	GCA_001724275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/275/GCA_001724275.1_ASM172427v1	26031303	-
Kaistia sp. SCN 65-12	1660103	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	9.38097	65	-	MEDI01	1015	9421	8272	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652428	GCA_001724045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/045/GCA_001724045.1_ASM172404v1	26031303	-
Lautropia sp. SCN 69-89	1660104	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	3.80812	69	-	MEED01	70	3644	3444	9/13/16	9/13/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03652449	GCA_001724855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/855/GCA_001724855.1_ASM172485v1	26031303	-
Niastella sp. SCN 39-18	1660119	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	3.21744	39.3	-	MEEN01	51	2883	2771	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652462	GCA_001724485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/485/GCA_001724485.1_ASM172448v1	26031303	-
Pelagibacterium sp. H642	1881069	PRJEB16670	349894	Proteobacteria	Alphaproteobacteria	3.94058	61.4	-	FNRH01	27	3857	3772	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428936	GCA_900107865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/865/GCA_900107865.1_IMG-taxon_2671180225_annotated_assembly	-	H642
Planctomycetes bacterium SCN 63-9	1660165	PRJNA279279	279279	PVC group	Planctomycetes	1.75153	63.1	-	MEEY01	257	1624	1324	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652474	GCA_001724615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/615/GCA_001724615.1_ASM172461v1	26031303	-
bacterium SCN 62-11	1660156	PRJNA279279	279279	unclassified Bacteria	unclassified Bacteria (miscellaneous)	4.75138	61.7	-	MEEQ01	540	4603	4039	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652465	GCA_001724515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/515/GCA_001724515.1_ASM172451v1	26031303	-
Rhodospirillales bacterium SCN 65-16	1660166	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	1.22612	65.5	-	MEFC01	128	1240	1124	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652478	GCA_001724675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/675/GCA_001724675.1_ASM172467v1	26031303	-
Sphingobacteriales bacterium SCN 48-20	1660167	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	3.74849	48.4	-	MEFE01	153	3261	3069	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652480	GCA_001724695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/695/GCA_001724695.1_ASM172469v1	26031303	-
Thiobacillus sp. SCN 64-35	1660150	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	0.777841	63.6	-	MEFJ01	85	762	678	9/13/16	9/13/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03652486	GCA_001724775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/775/GCA_001724775.1_ASM172477v1	26031303	-
Xanthomonadaceae bacterium SCN 69-25	1660172	PRJNA279279	279279	Proteobacteria	Gammaproteobacteria	5.71113	68.7	-	MEGS01	68	4722	4572	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652523	GCA_001725595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/595/GCA_001725595.1_ASM172559v1	26031303	-
Xanthomonadaceae bacterium SCN 69-123	1660170	PRJNA279279	279279	Proteobacteria	Gammaproteobacteria	8.48985	69	-	MEFO01	81	7055	6825	9/13/16	9/13/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03652491	GCA_001725645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/645/GCA_001725645.1_ASM172564v1	26031303	-
bacterium SCN 57-13	1660157	PRJNA279279	279279	unclassified Bacteria	unclassified Bacteria (miscellaneous)	0.816919	57.4	-	MEGB01	110	793	672	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652504	GCA_001725715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/715/GCA_001725715.1_ASM172571v1	26031303	-
Prevotellaceae bacterium Marseille-P2826	1852368	PRJEB15302	341972	FCB group	Bacteroidetes/Chlorobi group	2.77161	47.4	-	FMIU01	6	2222	2053	9/7/16	4/13/17	Scaffold	URMITE	SAMEA4415111	GCA_900095835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/835/GCA_900095835.1_PRJEB15302	-	Marseille-P2826
Colibacter massiliensis	1852379	PRJEB15308	341975	Terrabacteria group	Firmicutes	1.71586	50.2	-	FMIY01	2	1655	1567	9/7/16	4/26/17	Contig	URMITE	SAMEA4415313	GCA_900095855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/855/GCA_900095855.1_PRJEB15308	-	Marseille-P2911
Caecibacter massiliensis	1852378	PRJEB15306	341976	Terrabacteria group	Firmicutes	2.65054	49.7	-	FMIV01	2	2463	2331	9/7/16	4/26/17	Scaffold	URMITE	SAMEA4415268	GCA_900095875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/875/GCA_900095875.1_PRJEB15306	-	Marseille-P2974
Candidatus Gallionella acididurans	1796491	PRJNA309053	309053	Proteobacteria	Betaproteobacteria	3.43429	55.6	-	LSLI01	316	3560	3521	2/29/16	9/19/16	Contig	"Institute of Bioengineering, Research Center of Biotechnology of RAS"	SAMN04419952	GCA_001577345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/345/GCA_001577345.1_ASM157734v1	28853774	-
Methanosphaera sp. A6	1860157	PRJNA324744	324744	Euryarchaeota	Methanobacteria	1.55648	27.7	-	MAIF01	167	1473	1388	9/16/16	4/17/17	Contig	"Australian Centre for Ecogenomics, The University of Queensland"	SAMN05231872	GCA_001729395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/395/GCA_001729395.1_ASM172939v1	-	A6
Paludibacter sp. 47-17	1895899	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	4.18262	47.1	-	MKVT01	39	3166	3056	12/9/16	12/9/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN05660614	GCA_001898935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/935/GCA_001898935.1_ASM189893v1	-	-
Mycobacterium shimoidei	29313	PRJNA299467	299467	Terrabacteria group	Actinobacteria	4.71374	65.8	-	LQPU01	71	4516	4353	4/20/17	4/22/17	Contig	University of Trento	SAMN04216951	GCA_002101905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/905/GCA_002101905.1_ASM210190v1	-	DSM 44152
Rubrivivax sp. SCN 71-131	1660138	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	3.91613	70.8	-	MEFD01	43	3605	3480	9/13/16	9/13/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03652479	GCA_001724995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/995/GCA_001724995.1_ASM172499v1	26031303	-
Candidatus Tremblaya princeps PCVAL	1053648	PRJNA68831	68831	Proteobacteria	Betaproteobacteria	0.138931	58.8	chromosome:NC_017293.1/CP002918.1	-	1	194	180	7/19/11	8/21/17	Complete Genome	University of Valencia	SAMN02604250	GCA_000220965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/965/GCA_000220965.1_ASM22096v1	21914892	PCVAL
Flavobacteriaceae bacterium (ex Bugula neritina AB1)	1868281	PRJNA322176	322176	FCB group	Bacteroidetes/Chlorobi group	1.59315	33.8	-	MDKZ01	315	1633	1322	9/16/16	9/16/16	Scaffold	University of Wisconsin - Madison	SAMN03766361	GCA_001729995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/995/GCA_001729995.1_AB1_flavo	27681823	-
Chromatiales bacterium (ex Bugula neritina AB1)	1868282	PRJNA322176	322176	Proteobacteria	Gammaproteobacteria	7.44056	50.4	-	MDLA01	207	6519	6314	9/16/16	9/16/16	Scaffold	University of Wisconsin - Madison	SAMN03766363	GCA_001730015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/015/GCA_001730015.1_AB1_chromatiales	27681823	-
Rickettsiales bacterium (ex Bugula neritina AB1)	1868285	PRJNA322176	322176	Proteobacteria	Alphaproteobacteria	0.435544	21.6	-	MDLE01	8	448	399	9/16/16	9/16/16	Contig	University of Wisconsin - Madison	SAMN03766371	GCA_001730065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/065/GCA_001730065.1_AB1_rickettsiales	27681823	-
PVC group bacterium (ex Bugula neritina AB1)	1868283	PRJNA322176	322176	PVC group	unclassified PVC group	1.90766	34.7	-	MDLB01	108	1516	1319	9/16/16	9/16/16	Scaffold	University of Wisconsin - Madison	SAMN03766366	GCA_001730085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/085/GCA_001730085.1_AB1_pvc	27681823	-
Rhodobacteraceae bacterium (ex Bugula neritina AB1)	1868286	PRJNA322176	322176	Proteobacteria	Alphaproteobacteria	4.67167	60.3	-	MDLF01	106	4452	4269	9/16/16	9/16/16	Scaffold	University of Wisconsin - Madison	SAMN03766454	GCA_001730095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/095/GCA_001730095.1_AB1_rhodo	27681823	-
Desulfuribacillus alkaliarsenatis	766136	PRJNA341991	341991	Terrabacteria group	Firmicutes	3.10643	37.5	-	MIJE01	36	3000	2894	9/16/16	4/17/17	Contig	University of Georgia	SAMN05731213	GCA_001730225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/225/GCA_001730225.1_ASM173022v1	-	AHT28
Vulcanibacillus modesticaldus	337097	PRJNA342008	342008	Terrabacteria group	Firmicutes	2.22434	33.6	-	MIJF01	100	2306	2166	9/16/16	4/17/17	Contig	University of Georgia	SAMN05731676	GCA_001730235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/235/GCA_001730235.1_ASM173023v1	-	BR
Enterococcus plantarum	1077675	PRJNA330680	330680	Terrabacteria group	Firmicutes	3.1354	36	-	MIKA01	50	2981	2825	9/16/16	4/13/17	Contig	CDC	SAMN05420586	GCA_001730295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/295/GCA_001730295.1_ASM173029v1	-	LMG 26214
Enterococcus ureasiticus	903984	PRJNA330680	330680	Terrabacteria group	Firmicutes	3.5854	35.8	-	MIJZ01	19	3329	3212	9/16/16	4/17/17	Contig	CDC	SAMN05420582	GCA_001730285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/285/GCA_001730285.1_ASM173028v1	-	DSM 23328
Enterococcus termitis	332950	PRJNA330680	330680	Terrabacteria group	Firmicutes	4.15515	36.8	-	MIJY01	47	3979	3843	9/16/16	4/13/17	Contig	CDC	SAMN05420590	GCA_001730305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/305/GCA_001730305.1_ASM173030v1	-	LMG 8895
Candidatus Tremblaya princeps PCIT	891398	PRJNA53211	53211	Proteobacteria	Betaproteobacteria	0.138927	58.8	chromosome:NC_015736.1/CP002244.1	-	1	193	179	6/24/11	8/21/17	Complete Genome	University of Montana	SAMN02604228	GCA_000219195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/195/GCA_000219195.1_ASM21919v1	21835622	PCIT
Nitrosomonadales bacterium SCN 54-20	1660164	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	4.99893	54.2	-	MEEO01	379	4709	4291	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652463	GCA_001724915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/915/GCA_001724915.1_ASM172491v1	26031303	-
Verrucomicrobia bacterium SCN 57-15	1660168	PRJNA279279	279279	PVC group	Verrucomicrobia	0.758781	57	-	MEFN01	74	804	725	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652490	GCA_001725055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/055/GCA_001725055.1_ASM172505v1	26031303	-
Xanthomonadaceae bacterium SCN 69-320	1660169	PRJNA279279	279279	Proteobacteria	Gammaproteobacteria	5.71295	68.6	-	MEFP01	30	4707	4598	9/13/16	9/13/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03652492	GCA_001725155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/155/GCA_001725155.1_ASM172515v1	26031303	-
Xanthomonadaceae bacterium SCN 69-48	1660171	PRJNA279279	279279	Proteobacteria	Gammaproteobacteria	3.65213	68.8	-	MEFQ01	344	3602	3147	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652493	GCA_001725175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/175/GCA_001725175.1_ASM172517v1	26031303	-
Comamonadaceae bacterium SCN 68-20	1660161	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	4.84804	68.3	-	MEFU01	108	4301	4093	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652497	GCA_001725235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/235/GCA_001725235.1_ASM172523v1	26031303	-
Acetobacteraceae bacterium SCN 69-10	1660159	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	2.10074	68.9	-	MEFR01	279	2162	1754	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652494	GCA_001725205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/205/GCA_001725205.1_ASM172520v1	26031303	-
Enterococcus ureilyticus	1131292	PRJNA330680	330680	Terrabacteria group	Firmicutes	3.47271	36.1	-	MIKC01	42	3275	3150	9/16/16	4/13/17	Contig	CDC	SAMN05420589	GCA_001730315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/315/GCA_001730315.1_ASM173031v1	-	LMG 26676
Enterococcus quebecensis	903983	PRJNA330680	330680	Terrabacteria group	Firmicutes	3.16277	35.1	-	MIKB01	19	2895	2782	9/16/16	4/13/17	Contig	CDC	SAMN05420588	GCA_001730365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/365/GCA_001730365.1_ASM173036v1	-	LMG 26306
Arcticibacter eurypsychrophilus	1434752	PRJNA338528	338528	FCB group	Bacteroidetes/Chlorobi group	4.68667	38.5	-	MDFN01	94	3842	3700	9/18/16	4/13/17	Contig	Institute of Tibetan Plateau Research	SAMN05559869	GCA_001730525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/525/GCA_001730525.1_ASM173052v1	-	MJ9-5
Pseudomonas salomonii	191391	PRJNA338689	338689	Proteobacteria	Gammaproteobacteria	7.14018	59.8	-	MDFI01	81	6537	6285	9/18/16	4/13/17	Contig	Ottawa Research and Development Center	SAMN05560691	GCA_001730645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/645/GCA_001730645.1_ASM173064v1	-	LMG 22120
Caloranaerobacter ferrireducens	1323370	PRJNA338718	338718	Terrabacteria group	Firmicutes	2.45194	29.5	-	MDJR01	28	2419	2348	9/18/16	4/13/17	Contig	329 lab	SAMN05567320	GCA_001730685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/685/GCA_001730685.1_ASM173068v1	-	DY22619
Corynebacterium lowii	1544413	PRJNA295862	295862	Terrabacteria group	Actinobacteria	2.35443	62.9	-	LKEV01	11	2264	2151	10/23/15	4/11/17	Contig	Public Health Agency of Canada	SAMN04091594	GCA_001412085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/085/GCA_001412085.1_ASM141208v1	-	NML 130206
Corynebacterium oculi	1544416	PRJNA295863	295863	Terrabacteria group	Actinobacteria	2.41387	64.8	-	LKST01	4	2340	2196	10/23/15	4/11/17	Contig	Public Health Agency of Canada	SAMN04091236	GCA_001412105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/105/GCA_001412105.1_ASM141210v1	-	NML 130210
Acidithiobacillus ferrooxidans ATCC 23270	243159	PRJNA53	53	Proteobacteria	Acidithiobacillia	2.9824	58.8	chromosome:NC_011761.1/CP001219.1	-	1	3087	2909	12/19/08	3/30/17	Complete Genome	TIGR	SAMN02603974	GCA_000021485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/485/GCA_000021485.1_ASM2148v1	19077236	ATCC 23270
Vibrio europaeus	300876	PRJNA312891	312891	Proteobacteria	Gammaproteobacteria	5.46946	44.9859	plasmid p57_like:NZ_CM004621.1/CM004621.1	LUAX01	10	5096	4912	5/23/16	4/17/17	Scaffold	University of Santiago de Compostela	SAMN04508217	GCA_001695575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/575/GCA_001695575.1_ASM169557v1	-	PP-638
Nesterenkonia massiliensis	1232429	PRJEB668	182301	Terrabacteria group	Actinobacteria	2.67243	62.7	-	CBLL01	19	2484	2259	6/10/13	4/28/17	Scaffold	URMITE	SAMEA2272581	GCA_000455245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/245/GCA_000455245.1_Nm_NP1	-	NP1
Pseudorhizobium pelagicum	1509405	PRJNA252589	252589	Proteobacteria	Alphaproteobacteria	5.13461	62.8	-	JOKI01	62	4998	4791	7/7/14	4/9/17	Contig	University Miguel Hernandez	SAMN02864219	GCA_000722615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/615/GCA_000722615.1_ASM72261v1	26078205	R1-200B4
Magnetovibrio blakemorei	28181	PRJNA335915	335915	Proteobacteria	Alphaproteobacteria	3.6388	54.3	-	MCGG01	91	3580	3347	9/26/16	4/17/17	Contig	Southwestern Oklahoma State University	SAMN05467120	GCA_001746755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/755/GCA_001746755.1_ASM174675v1	-	MV-1
Hoeflea sp. IMCC20628	1620421	PRJNA276494	276494	Proteobacteria	Alphaproteobacteria	5.11981	58.7916	chromosome:NZ_CP011479.1/CP011479.1; plasmid unnamed:NZ_CP011481.1/CP011481.1; plasmid unnamed:NZ_CP011480.1/CP011480.1	-	3	4840	4689	5/21/15	4/10/17	Complete Genome	Inha University	SAMN03375744	GCA_001011155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/155/GCA_001011155.1_ASM101115v1	-	IMCC20628
Desertifilum sp. IPPAS B-1220	1781255	PRJNA343432	343432	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.09073	48.7	-	MJGC01	132	5154	4976	9/26/16	4/18/17	Contig	"Institute of Plant Physiology, Russian Academy of Sciences"	SAMN05788062	GCA_001746915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/915/GCA_001746915.1_ASM174691v1	27856594	IPPAS B-1220
Streptomyces humi	1428620	PRJNA280559	280559	Terrabacteria group	Actinobacteria	10.0142	71.8	-	LBMU02	214	8752	8340	5/7/15	3/14/17	Contig	University of Malaya	SAMN03465092	GCA_001005085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/085/GCA_001005085.2_ASM100508v2	-	MUSC 119
Kosmotoga sp. DU53	1310160	PRJNA194145	194145	Thermotogae	Thermotogae	2.37526	41.4	-	JGCK01	97	2353	2095	5/4/16	4/12/17	Contig	University of Alberta	SAMN02687976	GCA_001639905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/905/GCA_001639905.1_KosmotogaDU53_MIRA_1000.reordered	27313308	DU53
Fabibacter misakiensis	1563681	PRJNA338728	338728	FCB group	Bacteroidetes/Chlorobi group	4.45238	40.1	-	MDGQ01	5	3831	3774	9/28/16	6/19/17	Contig	The University of Tokyo	SAMN05567582	GCA_001747105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/105/GCA_001747105.1_ASM174710v1	-	SK-8
Corynebacterium phocae	161895	PRJNA242582	242582	Terrabacteria group	Actinobacteria	2.79188	58.7758	chromosome:NZ_CP009249.1/CP009249.1; plasmid pCpho:NZ_CP009250.1/CP009250.1	-	2	2512	2392	1/10/17	4/17/17	Complete Genome	Bielefeld University	SAMN02996498	GCA_001941565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/565/GCA_001941565.1_ASM194156v1	-	M408/89/1
Pseudomonas cerasi	1583341	PRJEB12896	327186	Proteobacteria	Gammaproteobacteria	6.34526	58.7466	chromosome 1:NZ_LT222319.1/LT222319.1; plasmid p58T1:NZ_LT222313.1/LT222313.1; plasmid p58T2:NZ_LT222314.1/LT222314.1; plasmid p58T3:NZ_LT222315.1/LT222315.1; plasmid p58T4:NZ_LT222316.1/LT222316.1; plasmid p58T5:NZ_LT222317.1/LT222317.1; plasmid p58T6:NZ_LT222318.1/LT222318.1	-	7	5975	5478	6/30/16	4/13/17	Complete Genome	JLU	SAMEA3894894	GCA_900074915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/915/GCA_900074915.1_PCPL58T	-	-
Cloacibacterium normanense	237258	PRJEB16271	348865	FCB group	Bacteroidetes/Chlorobi group	2.73627	33.1	-	FNJE01	43	2566	2447	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04489756	GCA_900104195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/195/GCA_900104195.1_IMG-taxon_2634166320_annotated_assembly	-	DSM 15886
Acidobacterium ailaaui	1382359	PRJNA214267	214267	Acidobacteria	Acidobacteriia	3.68652	56.5	-	JIAL01	1	3175	3082	4/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743914	GCA_000688455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/455/GCA_000688455.1_ASM68845v1	-	PMMR2
Streptomyces subrutilus	36818	PRJNA340062	340062	Terrabacteria group	Actinobacteria	8.09398	72.1411	plasmid pACMP1:NZ_CM007203.1/CM007203.1; plasmid pACMP2:NZ_CM007204.1/CM007204.1	MEHK01	6	7261	6809	9/26/16	3/14/17	Contig	Chinese Academy of Sciences	SAMN05631079	GCA_001746425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/425/GCA_001746425.1_ASM174642v1	-	10/1/01
Domibacillus iocasae	1714016	PRJNA326301	326301	Terrabacteria group	Firmicutes	3.46428	43	-	MAMP01	26	3600	3433	9/30/16	4/13/17	Contig	CSIR-Institute of Microbial Technology	SAMN05255235	GCA_001750285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/285/GCA_001750285.1_ASM175028v1	-	DSM 29979
Betaproteobacteria bacterium AqS2	1732024	PRJNA297395	297395	Proteobacteria	Betaproteobacteria	1.60867	68.8	-	MEIE01	239	-	-	10/3/16	10/3/16	Contig	University of Queensland	SAMN04123283	GCA_001750625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/625/GCA_001750625.1_ASM175062v1	-	-
Gammaproteobacteria bacterium AqS3	1732023	PRJNA297395	297395	Proteobacteria	Gammaproteobacteria	3.16158	61.9	-	MEIF01	234	-	-	10/3/16	10/3/16	Contig	University of Queensland	SAMN04123286	GCA_001750645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/645/GCA_001750645.1_ASM175064v1	-	-
Ectothiorhodospiraceae bacterium AqS1	1725326	PRJNA297395	297395	Proteobacteria	Gammaproteobacteria	4.203	58.9	-	MEID01	166	-	-	10/3/16	10/3/16	Contig	University of Queensland	SAMN04123276	GCA_001750655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/655/GCA_001750655.1_ASM175065v1	-	-
Ruegeria mobilis F1926	1265309	PRJNA196123	196123	Proteobacteria	Alphaproteobacteria	4.83003	58.7372	chromosome:NZ_CP015230.1/CP015230.1; plasmid unnamed1:NZ_CP015231.1/CP015231.1; plasmid unnamed2:NZ_CP015232.1/CP015232.1; plasmid unnamed3:NZ_CP015233.1/CP015233.1; plasmid unnamed4:NZ_CP015234.1/CP015234.1	-	5	4620	4465	7/7/16	4/5/17	Complete Genome	"Technical University of Denmark, Department of Systems Biology"	SAMN02471033	GCA_000376545.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/545/GCA_000376545.2_ASM37654v2	27552638	F1926
Pseudomonas sp. BS-2016	1907766	PRJNA283442	283442	Proteobacteria	Gammaproteobacteria	4.81426	58.7	chromosome:NZ_CP017687.1/CP017687.1	-	1	4423	4001	10/11/16	4/13/17	Complete Genome	"University of Michigan, Ann Arbor"	SAMN03650284	GCA_001020725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/725/GCA_001020725.2_ASM102072v2	-	AU1044
Desulfobacterales bacterium C00003104	1866913	PRJNA290197	290197	Proteobacteria	delta/epsilon subdivisions	2.14913	48.4	-	MANV01	284	2026	1644	10/3/16	10/3/16	Scaffold	California Institute of Technology	SAMN05263723	GCA_001750905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/905/GCA_001750905.1_ASM175090v1	-	-
Desulfobulbaceae bacterium S3730MH12	1869305	PRJNA290197	290197	Proteobacteria	delta/epsilon subdivisions	3.1285	44.9	-	MAXH01	319	2941	2707	10/3/16	10/3/16	Contig	California Institute of Technology	SAMN05301619	GCA_001750925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/925/GCA_001750925.1_ASM175092v1	-	-
Desulfobacterales bacterium S3730MH5	1869298	PRJNA290197	290197	Proteobacteria	delta/epsilon subdivisions	2.85373	49.2	-	MAXG01	539	2578	2292	10/3/16	10/3/16	Contig	California Institute of Technology	SAMN05301618	GCA_001750945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/945/GCA_001750945.1_ASM175094v1	-	-
Desulfobulbaceae bacterium S5133MH15	1869306	PRJNA290197	290197	Proteobacteria	delta/epsilon subdivisions	2.9498	44.9	-	MAXK01	391	2838	2503	10/3/16	10/3/16	Contig	California Institute of Technology	SAMN05301623	GCA_001750995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/995/GCA_001750995.1_ASM175099v1	-	-
Desulfobacterales bacterium S5133MH16	1869300	PRJNA290197	290197	Proteobacteria	delta/epsilon subdivisions	3.0221	43.6	-	MAXL01	574	2968	2626	10/3/16	10/3/16	Contig	California Institute of Technology	SAMN05301624	GCA_001751005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/005/GCA_001751005.1_ASM175100v1	-	-
Desulfobacterales bacterium S5133MH4	1869299	PRJNA290197	290197	Proteobacteria	delta/epsilon subdivisions	3.59829	48.2	-	MAXJ01	700	3267	2879	10/3/16	10/3/16	Contig	California Institute of Technology	SAMN05301622	GCA_001750985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/985/GCA_001750985.1_ASM175098v1	-	-
Desulfobacterales bacterium C00003106	1869301	PRJNA290197	290197	Proteobacteria	delta/epsilon subdivisions	2.20905	48.3	-	MAXM01	370	2036	1758	10/3/16	10/3/16	Scaffold	California Institute of Technology	SAMN05301625	GCA_001751015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/015/GCA_001751015.1_ASM175101v1	-	-
Desulfobacterales bacterium S7086C20	1869302	PRJNA326769	326769	Proteobacteria	delta/epsilon subdivisions	2.65397	46.5	-	MAVP01	241	2548	2322	10/3/16	10/3/16	Scaffold	California Institute of Technology	SAMN05301627	GCA_001751075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/075/GCA_001751075.1_ASM175107v1	-	-
Desulfuromonadales bacterium C00003094	1869310	PRJNA290197	290197	Proteobacteria	delta/epsilon subdivisions	2.45312	54	-	MAXN01	512	2495	1953	10/3/16	10/3/16	Scaffold	California Institute of Technology	SAMN05301628	GCA_001751065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/065/GCA_001751065.1_ASM175106v1	-	-
Desulfobacterales bacterium C00003060	1869303	PRJNA290197	290197	Proteobacteria	delta/epsilon subdivisions	2.21935	48.9	-	MAXP01	359	2040	1781	10/3/16	10/3/16	Scaffold	California Institute of Technology	SAMN05301630	GCA_001751085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/085/GCA_001751085.1_ASM175108v1	-	-
Desulfuromonadales bacterium C00003096	1869311	PRJNA290197	290197	Proteobacteria	delta/epsilon subdivisions	3.37403	50.5	-	MAXO01	775	3393	2686	10/3/16	10/3/16	Scaffold	California Institute of Technology	SAMN05301629	GCA_001751115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/115/GCA_001751115.2_ASM175111v2	-	-
Desulfuromonadales bacterium C00003068	1869312	PRJNA290197	290197	Proteobacteria	delta/epsilon subdivisions	2.73858	46.1	-	MAXR01	461	2725	2160	10/3/16	10/3/16	Scaffold	California Institute of Technology	SAMN05301632	GCA_001751155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/155/GCA_001751155.1_ASM175115v1	-	-
Desulfobulbaceae bacterium C00003063	1869307	PRJNA290197	290197	Proteobacteria	delta/epsilon subdivisions	3.46264	44.8	-	MAXQ01	563	3405	2876	10/3/16	10/3/16	Scaffold	California Institute of Technology	SAMN05301631	GCA_001751145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/145/GCA_001751145.1_ASM175114v1	-	-
Desulfobacterales bacterium PC51MH44	1869304	PRJNA326769	326769	Proteobacteria	delta/epsilon subdivisions	2.92962	43.7	-	MAVQ01	568	2784	2397	10/3/16	10/3/16	Scaffold	California Institute of Technology	SAMN05301633	GCA_001751165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/165/GCA_001751165.1_ASM175116v1	-	-
Desulfuromonadales bacterium C00003093	1869308	PRJNA290197	290197	Proteobacteria	delta/epsilon subdivisions	3.21485	50.1	-	MAXS01	558	3150	2627	10/3/16	10/3/16	Scaffold	California Institute of Technology	SAMN05301621	GCA_001751205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/205/GCA_001751205.1_ASM175120v1	-	-
Desulfuromonadales bacterium C00003107	1869309	PRJNA290197	290197	Proteobacteria	delta/epsilon subdivisions	2.53087	52.4	-	MAXT01	423	2526	2049	10/3/16	10/3/16	Scaffold	California Institute of Technology	SAMN05301626	GCA_001751225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/225/GCA_001751225.1_ASM175122v1	-	-
Anaerobium acetethylicum	1619234	PRJEB15475	343904	Terrabacteria group	Firmicutes	4.60904	43.5	-	FMKA01	105	3998	3840	9/23/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421730	GCA_900096945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/096/945/GCA_900096945.1_IMG-taxon_2675903067_annotated_assembly	-	GluBS11
Streptomyces oceani	1075402	PRJNA242488	242488	Terrabacteria group	Actinobacteria	6.31105	70.4	-	LJGU01	166	5366	4845	10/4/16	3/14/17	Scaffold	"Beijing Institute of Genomics, Chinese Academy of Sciences"	SAMN04026263	GCA_001751245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/245/GCA_001751245.1_ASM175124v1	27446038	SCSIO 02100
Streptomyces nanshensis	518642	PRJNA242488	242488	Terrabacteria group	Actinobacteria	7.72436	71.6	-	LJGW01	731	6717	6048	10/4/16	3/13/17	Scaffold	"Beijing Institute of Genomics, Chinese Academy of Sciences"	SAMN04026265	GCA_001751255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/255/GCA_001751255.1_ASM175125v1	27446038	SCSIO 10429
Streptomyces agglomeratus	285458	PRJNA302687	302687	Terrabacteria group	Actinobacteria	9.12873	70.4	-	MEHJ01	5	8288	7457	9/26/16	3/13/17	Contig	Chinese Academy of Sciences	SAMN04277419	GCA_001746415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/415/GCA_001746415.1_ASM174641v1	-	6/3/02
Desulfoplanes formicivorans	1592317	PRJDB4875	327547	Proteobacteria	delta/epsilon subdivisions	3.00098	54	-	BDFE01	26	2715	2628	6/30/16	6/20/17	Scaffold	"The Institute of Low Temperature Science, Hokkaido University"	SAMD00052800	GCA_001748225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/225/GCA_001748225.1_ASM174822v1	28593027	Pf12B
Oligoflexus tunisiensis	708132	PRJDB4872	327363	Proteobacteria	Oligoflexia	7.56911	54.3	-	BDFO01	1	-	-	6/30/16	6/30/16	Scaffold	National Institute of Genetics	SAMD00052757	GCA_001748245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/245/GCA_001748245.1_ASM174824v1	-	Shr3
Thermogemmatispora onikobensis	732234	PRJDB5101	339612	Terrabacteria group	Chloroflexi	5.5565	61.1	-	BDGT01	112	4404	4254	8/20/16	4/17/17	Contig	National Institute of Technology and Evaluation Biological Resource Center	SAMD00057755	GCA_001748285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/285/GCA_001748285.1_ASM174828v1	-	NBRC 111776
Streptomyces luteocolor	285500	PRJDB3578	310204	Terrabacteria group	Actinobacteria	9.29867	71.9	-	BDGW01	262	8236	7625	8/23/16	3/13/17	Scaffold	National Institute of Infectious Diseases	SAMD00027180	GCA_001748305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/305/GCA_001748305.1_ASM174830v1	27084005	NBRC 13826
Fusibacter sp. 3D3	1048380	PRJDB4973	328776	Terrabacteria group	Firmicutes	5.11125	37.6	-	BDHH01	57	4663	4448	9/3/16	4/17/17	Contig	Centro de Biotecnologia. Universidad Catolica del Norte	SAMD00055724	GCA_001748365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/365/GCA_001748365.1_ASM174836v1	-	3D3
Vulcanisaeta thermophila	867917	PRJDB4306	299726	TACK group	Crenarchaeota	2.02259	49.1	-	BCLI01	10	2138	2039	7/29/16	4/17/17	Contig	Korea Basic Science Institute	SAMD00042494	GCA_001748385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/385/GCA_001748385.1_ASM174838v1	-	CBA1501
Arenibacter sp. AK53	1406873	PRJNA360244	360244	FCB group	Bacteroidetes/Chlorobi group	3.98537	40.8	-	MTAZ01	101	3318	3212	5/19/17	5/24/17	Contig	CSIR-IMTECH	SAMN06205367	GCA_002150785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/785/GCA_002150785.1_ASM215078v1	-	AK53
[Butyribacterium] methylotrophicum	1487	PRJNA342396	342396	Terrabacteria group	Firmicutes	4.25602	47.5	-	MIMZ01	26	4028	3917	10/6/16	4/13/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05756208	GCA_001753695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/695/GCA_001753695.1_ASM175369v1	-	DSM 3468
Francisella endosymbiont of Amblyomma maculatum	255919	PRJNA301476	301476	Proteobacteria	Gammaproteobacteria	1.55626	31.7	-	LNCT01	7	1525	1001	10/7/16	10/7/16	Contig	Portland State University	SAMN04247395	GCA_001753795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/795/GCA_001753795.1_ASM175379v1	27645766	FLE-Am
Alteromonas confluentis	1656094	PRJNA336468	336468	Proteobacteria	Gammaproteobacteria	4.86496	48	-	MDHN01	46	4271	4157	10/11/16	4/13/17	Scaffold	"Second Institute of Oceanography, State Oceanic Administration"	SAMN05511237	GCA_001757105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/105/GCA_001757105.1_ASM175710v1	-	KCTC 42603
Sphingobium phenoxybenzoativorans	1592790	PRJNA342392	342392	Proteobacteria	Alphaproteobacteria	5.03917	62.2	-	MINO01	202	4998	4689	10/11/16	4/13/17	Contig	Jiangsu Academy of Agricultural Sciences	SAMN05756205	GCA_001757355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/355/GCA_001757355.1_ASM175735v1	-	SC_3
Pseudohongiella acticola	1524254	PRJNA320169	320169	Proteobacteria	Gammaproteobacteria	3.61248	55.2	-	MASR01	8	3191	3119	10/12/16	4/13/17	Contig	"Second Institute of Oceanography, State Oceanic Administration"	SAMN05356477	GCA_001758195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/195/GCA_001758195.1_ASM175819v1	-	KCTC 42131
Humibacillus sp. DSM 29435	1869167	PRJNA327135	327135	Terrabacteria group	Actinobacteria	5.02371	69.3	-	MAST01	54	4595	4439	10/12/16	4/13/17	Contig	Monash University Malaysia	SAMN05316822	GCA_001758225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/225/GCA_001758225.1_ASM175822v1	-	DSM 29435
Clostridium acetireducens DSM 10703	1121290	PRJNA325140	325140	Terrabacteria group	Firmicutes	2.42421	26.7	-	LZFO01	85	2313	2173	10/12/16	4/17/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05220839	GCA_001758365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/365/GCA_001758365.1_ASM175836v1	-	DSM 10703
Wolbachia endosymbiont of Drosophila incompta	1633785	PRJNA279175	279175	Proteobacteria	Alphaproteobacteria	1.26784	35.8	chromosome:NZ_CP011148.1/CP011148.1	-	1	1232	917	10/11/16	4/13/17	Chromosome	Universidade Federal do Pampa	SAMN03437828	GCA_001758565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/565/GCA_001758565.1_ASM175856v1	-	wInc_Cu
Gabonibacter massiliensis	1720195	PRJEB11880	304242	FCB group	Bacteroidetes/Chlorobi group	3.39702	42.1	-	FAVK01	7	2851	2752	11/29/15	4/11/17	Scaffold	URMITE	SAMEA3674818	GCA_001487125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/125/GCA_001487125.1_Sanguibacteroides_massiliensis	-	GM7
Candidatus Marispirochaeta associata	1560235	PRJNA270388	270388	Spirochaetes	Spirochaetia	5.24805	55.7	-	JWTM01	629	4632	4525	9/29/16	10/2/17	Contig	JNTU Hyderabad	SAMN03267223	GCA_001749745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/745/GCA_001749745.1_ASM174974v1	-	JC231
Candidatus Syntrophoarchaeum caldarius	1838285	PRJNA319143	319143	Euryarchaeota	Methanomicrobia	1.66608	45.4	-	LYOS01	10	1828	1787	10/18/16	10/18/16	Scaffold	Max Planck Institute for Marine Microbiology	SAMN04880560	GCA_001766815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/815/GCA_001766815.1_ASM176681v1	-	-
Candidatus Syntrophoarchaeum butanivorans	1839936	PRJNA318983	318983	Euryarchaeota	Methanomicrobia	1.45696	48.7	-	LYOR01	16	1640	1604	10/18/16	10/18/16	Scaffold	Max Planck Institute for Marine Microbiology	SAMN04871411	GCA_001766825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/825/GCA_001766825.1_ASM176682v1	-	-
Acetobacterium wieringae	52694	PRJNA297264	297264	Terrabacteria group	Firmicutes	3.89583	44.1	-	LKEU01	62	3677	3539	10/18/16	4/17/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04121044	GCA_001766835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/835/GCA_001766835.1_ASM176683v1	-	DSM 1911
Acidobacteria bacterium RBG_16_68_9	1797173	PRJNA288027	288027	Acidobacteria	unclassified Acidobacteria	1.62327	63.9	-	MEKK01	196	1784	956	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316163	GCA_001766875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/875/GCA_001766875.1_ASM176687v1	27774985	-
Acidobacteria bacterium RBG_13_68_16	1797171	PRJNA288027	288027	Acidobacteria	unclassified Acidobacteria	3.61078	66.8	-	MEKI01	163	3289	2762	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313999	GCA_001766905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/905/GCA_001766905.1_ASM176690v1	27774985	-
Acidobacteria bacterium RBG_16_64_8	1797172	PRJNA288027	288027	Acidobacteria	unclassified Acidobacteria	2.56891	60.1	-	MEKJ01	321	2802	1408	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313747	GCA_001766895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/895/GCA_001766895.1_ASM176689v1	27774985	-
Acidobacteria bacterium RBG_16_70_10	1797174	PRJNA288027	288027	Acidobacteria	unclassified Acidobacteria	2.5475	68.7	-	MEKL01	188	2609	1690	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313695	GCA_001766955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/955/GCA_001766955.1_ASM176695v1	27774985	-
Acidobacteria bacterium RIFCSPHIGHO2_01_FULL_67_28	1797175	PRJNA288027	288027	Acidobacteria	unclassified Acidobacteria	1.64112	67	-	MEKM01	186	1678	1397	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314773	GCA_001766965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/965/GCA_001766965.1_ASM176696v1	27774985	-
Acidobacteria bacterium RIFCSPHIGHO2_12_FULL_67_30	1797177	PRJNA288027	288027	Acidobacteria	unclassified Acidobacteria	1.34603	67.1	-	MEKO01	155	1378	1133	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315546	GCA_001766985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/985/GCA_001766985.1_ASM176698v1	27774985	-
Acidobacteria bacterium RIFCSPHIGHO2_02_FULL_67_57	1797176	PRJNA288027	288027	Acidobacteria	unclassified Acidobacteria	1.49664	67.3	-	MEKN01	383	1526	1193	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315318	GCA_001766975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/975/GCA_001766975.1_ASM176697v1	27774985	-
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	1797180	PRJNA288027	288027	Acidobacteria	unclassified Acidobacteria	3.86437	60.8	-	MEKR01	199	3521	3297	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315916	GCA_001767035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/035/GCA_001767035.1_ASM176703v1	27774985	-
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_36	1797184	PRJNA288027	288027	Acidobacteria	unclassified Acidobacteria	6.38153	67.1	-	MEKV01	126	5502	5304	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315984	GCA_001767055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/055/GCA_001767055.1_ASM176705v1	27774985	-
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	1797185	PRJNA288027	288027	Acidobacteria	unclassified Acidobacteria	4.40932	68	-	MEKW01	95	4041	3756	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316049	GCA_001767065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/065/GCA_001767065.1_ASM176706v1	27774985	-
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_54_10	1797186	PRJNA288027	288027	Acidobacteria	unclassified Acidobacteria	2.94916	53.8	-	MEKX01	173	2736	2473	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315756	GCA_001767075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/075/GCA_001767075.1_ASM176707v1	27774985	-
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_59_11	1797187	PRJNA288027	288027	Acidobacteria	unclassified Acidobacteria	2.05877	57.8	-	MEKY01	187	2022	1749	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315808	GCA_001767115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/115/GCA_001767115.1_ASM176711v1	27774985	-
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	1797190	PRJNA288027	288027	Acidobacteria	unclassified Acidobacteria	1.35627	65.8	-	MELB01	162	1365	1118	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315757	GCA_001767135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/135/GCA_001767135.1_ASM176713v1	27774985	-
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_60_20	1797179	PRJNA288027	288027	Acidobacteria	unclassified Acidobacteria	1.88436	59.1	-	MEKQ01	222	1769	1469	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315982	GCA_001767145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/145/GCA_001767145.1_ASM176714v1	27774985	-
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	1797181	PRJNA288027	288027	Acidobacteria	unclassified Acidobacteria	3.95019	64.9	-	MEKS01	59	3749	3496	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315983	GCA_001767165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/165/GCA_001767165.1_ASM176716v1	27774985	-
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	1797183	PRJNA288027	288027	Acidobacteria	unclassified Acidobacteria	4.19387	67.3	-	MEKU01	107	3977	3682	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315917	GCA_001767195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/195/GCA_001767195.1_ASM176719v1	27774985	-
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	1797182	PRJNA288027	288027	Acidobacteria	unclassified Acidobacteria	5.50833	65.4	-	MEKT01	239	5050	4738	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315985	GCA_001767435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/435/GCA_001767435.1_ASM176743v1	27774985	-
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	1797191	PRJNA288027	288027	Acidobacteria	unclassified Acidobacteria	6.47518	67.1	-	MELC01	91	5515	5359	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315809	GCA_001767455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/455/GCA_001767455.1_ASM176745v1	27774985	-
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	1797188	PRJNA288027	288027	Acidobacteria	unclassified Acidobacteria	4.21558	59.3	-	MEKZ01	428	3807	3271	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316116	GCA_001767445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/445/GCA_001767445.1_ASM176744v1	27774985	-
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11	1797189	PRJNA288027	288027	Acidobacteria	unclassified Acidobacteria	3.55486	65	-	MELA01	153	3406	3114	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315864	GCA_001767495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/495/GCA_001767495.1_ASM176749v1	27774985	-
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14	1797192	PRJNA288027	288027	Acidobacteria	unclassified Acidobacteria	4.10608	67.3	-	MELD01	150	3903	3612	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315758	GCA_001767515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/515/GCA_001767515.1_ASM176751v1	27774985	-
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_68_19	1797194	PRJNA288027	288027	Acidobacteria	unclassified Acidobacteria	4.21212	68.3	-	MELF01	52	3783	3687	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315865	GCA_001767525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/525/GCA_001767525.1_ASM176752v1	27774985	-
Actinobacteria bacterium GWC2_53_9	1797195	PRJNA288027	288027	Terrabacteria group	Actinobacteria	1.78898	52.1	-	MELI01	114	1787	1342	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314195	GCA_001767575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/575/GCA_001767575.1_ASM176757v1	27774985	-
Actinobacteria bacterium RBG_16_55_12	1797199	PRJNA288027	288027	Terrabacteria group	Actinobacteria	2.55438	54.1	-	MELM01	63	2516	2115	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313722	GCA_001767605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/605/GCA_001767605.1_ASM176760v1	27774985	-
Actinobacteria bacterium RBG_13_35_12	1797196	PRJNA288027	288027	Terrabacteria group	Actinobacteria	2.19598	34	-	MELJ01	266	2310	1740	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314284	GCA_001767595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/595/GCA_001767595.1_ASM176759v1	27774985	-
Actinobacteria bacterium RBG_13_63_9	1797198	PRJNA288027	288027	Terrabacteria group	Actinobacteria	1.84848	58	-	MELL01	227	1970	948	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313995	GCA_001767615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/615/GCA_001767615.1_ASM176761v1	27774985	-
Actinobacteria bacterium RBG_16_67_10	1797201	PRJNA288027	288027	Terrabacteria group	Actinobacteria	1.63073	63.7	-	MELO01	204	1919	970	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314267	GCA_001767655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/655/GCA_001767655.1_ASM176765v1	27774985	-
Actinobacteria bacterium RBG_16_67_15	1797202	PRJNA288027	288027	Terrabacteria group	Actinobacteria	2.21904	65.7	-	MELP01	138	2431	1660	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314256	GCA_001767675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/675/GCA_001767675.1_ASM176767v1	27774985	-
Actinobacteria bacterium RBG_16_68_21	1797204	PRJNA288027	288027	Terrabacteria group	Actinobacteria	2.03179	67.7	-	MELR01	35	2074	1934	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314033	GCA_001767695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/695/GCA_001767695.1_ASM176769v1	27774985	-
Actinobacteria bacterium RBG_16_68_12	1797203	PRJNA288027	288027	Terrabacteria group	Actinobacteria	2.30488	65.3	-	MELQ01	285	2738	1570	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313976	GCA_001767685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/685/GCA_001767685.1_ASM176768v1	27774985	-
Actinobacteria bacterium RBG_19FT_COMBO_36_27	1797206	PRJNA288027	288027	Terrabacteria group	Actinobacteria	1.24512	34.5	-	MELT01	156	1326	1047	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314056	GCA_001767735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/735/GCA_001767735.1_ASM176773v1	27774985	-
Alphaproteobacteria bacterium GWA1_45_9	1797209	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	0.962719	44.6	-	MELX01	14	984	894	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316208	GCA_001767775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/775/GCA_001767775.1_ASM176777v1	27774985	-
Actinobacteria bacterium RBG_19FT_COMBO_54_7	1797207	PRJNA288027	288027	Terrabacteria group	Actinobacteria	1.49972	52.5	-	MELU01	154	1730	989	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313673	GCA_001767755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/755/GCA_001767755.1_ASM176775v1	27774985	-
Alphaproteobacteria bacterium GWB1_45_5	1797211	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	0.898943	44.3	-	MELZ01	63	972	767	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314186	GCA_001767795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/795/GCA_001767795.1_ASM176779v1	27774985	-
Alphaproteobacteria bacterium GWC2_42_16	1797212	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	1.54442	42.4	-	MEMA01	56	1530	1445	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313891	GCA_001767835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/835/GCA_001767835.1_ASM176783v1	27774985	-
Alphaproteobacteria bacterium RIFCSPHIGHO2_01_FULL_41_14	1797217	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	0.994497	44.7	-	MEMF01	3	1006	956	10/18/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04314774	GCA_001767855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/855/GCA_001767855.1_ASM176785v1	27774985	-
Alphaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_40_34	1797218	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	1.42943	40.1	-	MEMG01	49	1384	1322	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315468	GCA_001767865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/865/GCA_001767865.1_ASM176786v1	27774985	-
Alphaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_42_30	1797219	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	1.64652	42.3	-	MEMH01	65	1622	1528	10/18/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04315394	GCA_001767885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/885/GCA_001767885.1_ASM176788v1	27774985	-
Alphaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_46_13	1797220	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	2.13303	45.8	-	MEMI01	56	2145	1964	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315319	GCA_001767915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/915/GCA_001767915.1_ASM176791v1	27774985	-
Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_12	1797224	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	3.38334	63	-	MEMM01	172	3475	3044	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315630	GCA_001767925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/925/GCA_001767925.1_ASM176792v1	27774985	-
Alphaproteobacteria bacterium RIFCSPLOWO2_01_FULL_40_26	1797226	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	1.44202	40.1	-	MEMO01	38	1393	1333	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315040	GCA_001767955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/955/GCA_001767955.1_ASM176795v1	27774985	-
Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_66_14	1797225	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	4.46336	65.9	-	MEMN01	242	4665	3933	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315547	GCA_001767945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/945/GCA_001767945.1_ASM176794v1	27774985	-
Alphaproteobacteria bacterium RIFCSPLOWO2_02_42_7	1797228	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	1.06498	42.7	-	MEMQ01	92	1112	987	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313783	GCA_001767995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/995/GCA_001767995.1_ASM176799v1	27774985	-
Alphaproteobacteria bacterium RIFCSPLOWO2_02_FULL_40_19	1797229	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	1.45178	40.1	-	MEMR01	37	1414	1353	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315918	GCA_001768015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/015/GCA_001768015.1_ASM176801v1	27774985	-
Anaerolinea sp. RIFOXYB12_FULL_60_12	1797237	PRJNA288027	288027	Terrabacteria group	Chloroflexi	0.500237	54	-	MEMW01	229	392	216	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316174	GCA_001768045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/045/GCA_001768045.1_ASM176804v1	27774985	-
Alphaproteobacteria bacterium RIFOXYD12_FULL_60_8	1797233	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	2.1429	59.1	-	MEMV01	331	2400	1609	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314637	GCA_001768035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/035/GCA_001768035.1_ASM176803v1	27774985	-
Armatimonadetes bacterium RBG_16_58_9	1797287	PRJNA288027	288027	Terrabacteria group	Armatimonadetes	2.25452	56.7	-	MEMZ01	215	2300	1318	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314039	GCA_001768085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/085/GCA_001768085.1_ASM176808v1	27774985	-
Armatimonadetes bacterium RBG_16_67_12	1797288	PRJNA288027	288027	Terrabacteria group	Armatimonadetes	2.51717	66	-	MENA01	160	2676	1844	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314028	GCA_001768115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/115/GCA_001768115.1_ASM176811v1	27774985	-
Armatimonadetes bacterium RBG_19FT_COMBO_69_19	1797289	PRJNA288027	288027	Terrabacteria group	Armatimonadetes	2.24592	66.9	-	MENB01	190	2430	1741	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313680	GCA_001768125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/125/GCA_001768125.1_ASM176812v1	27774985	-
Bacteroidetes bacterium GWA2_30_7	1797313	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.12395	30	-	MENC01	308	3436	2756	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314167	GCA_001768155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/155/GCA_001768155.1_ASM176815v1	27774985	-
Bacteroidetes bacterium GWA2_40_14	1797318	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.80875	40.1	-	MENH01	208	3897	3603	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313816	GCA_001768165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/165/GCA_001768165.1_ASM176816v1	27774985	-
Bacteroidetes bacterium GWA2_40_15	1797319	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.76635	40.7	-	MENI01	127	3919	3771	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313824	GCA_001768195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/195/GCA_001768195.1_ASM176819v1	27774985	-
Bacteroidetes bacterium GWA2_42_15	1797320	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	5.93452	42	-	MENJ01	101	4885	4573	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313813	GCA_001768205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/205/GCA_001768205.1_ASM176820v1	27774985	-
Bacteroidetes bacterium GWB2_32_14	1797321	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.66149	33.5	-	MENK01	36	3099	3011	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313836	GCA_001768235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/235/GCA_001768235.1_ASM176823v1	27774985	-
Bacteroidetes bacterium GWB2_41_8	1797322	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.86656	41	-	MENL01	213	4350	3504	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314187	GCA_001768245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/245/GCA_001768245.1_ASM176824v1	27774985	-
Bacteroidetes bacterium GWC1_47_7	1797323	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.07374	45.8	-	MENM01	256	2668	1992	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314192	GCA_001768275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/275/GCA_001768275.1_ASM176827v1	27774985	-
Bacteroidetes bacterium GWC2_33_15	1797324	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.64686	33.5	-	MENN01	34	3094	3014	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313834	GCA_001768285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/285/GCA_001768285.1_ASM176828v1	27774985	-
Bacteroidetes bacterium GWC2_40_22	1797326	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.47677	40.8	-	MENP01	160	3671	3533	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313827	GCA_001768305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/305/GCA_001768305.1_ASM176830v1	27774985	-
Bacteroidetes bacterium GWC2_46_850	1797327	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.74961	46.6	-	MENQ01	32	2968	2870	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313808	GCA_001768325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/325/GCA_001768325.1_ASM176832v1	27774985	-
Bacteroidetes bacterium GWD2_33_33	1797328	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.67444	33.5	-	MENR01	39	3110	3029	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313835	GCA_001768355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/355/GCA_001768355.1_ASM176835v1	27774985	-
Bacteroidetes bacterium GWD2_40_43	1797329	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	5.04232	40.1	-	MENS01	87	3972	3859	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313817	GCA_001768365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/365/GCA_001768365.1_ASM176836v1	27774985	-
Bacteroidetes bacterium GWD2_45_23	1797330	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.62094	46.8	-	MENT01	27	2841	2747	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313807	GCA_001768395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/395/GCA_001768395.1_ASM176839v1	27774985	-
Bacteroidetes bacterium GWE2_32_14	1797332	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.40618	32.4	-	MENV01	39	3579	3501	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313821	GCA_001768405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/405/GCA_001768405.1_ASM176840v1	27774985	-
Bacteroidetes bacterium GWE2_39_28	1797333	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	2.51644	39.1	-	MENW01	16	2223	2164	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313840	GCA_001768435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/435/GCA_001768435.1_ASM176843v1	27774985	-
Bacteroidetes bacterium GWE2_40_15	1797334	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	2.8864	40.8	-	MENX01	31	2451	2370	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313841	GCA_001768455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/455/GCA_001768455.1_ASM176845v1	27774985	-
Bacteroidetes bacterium GWE2_40_63	1797335	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	5.1154	40	-	MENY01	58	4006	3917	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313818	GCA_001768475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/475/GCA_001768475.1_ASM176847v1	27774985	-
Bacteroidetes bacterium GWE2_41_25	1797336	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.62159	40.8	-	MENZ01	211	3804	3631	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313826	GCA_001768485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/485/GCA_001768485.1_ASM176848v1	27774985	-
Bacteroidetes bacterium GWE2_42_24	1797337	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.31962	43.5	-	MEOA01	67	3407	3320	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313832	GCA_001768515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/515/GCA_001768515.1_ASM176851v1	27774985	-
Bacteroidetes bacterium GWE2_42_39	1797338	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	6.06103	42.1	-	MEOB01	54	4916	4832	10/18/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04313810	GCA_001768535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/535/GCA_001768535.1_ASM176853v1	27774985	-
Bacteroidetes bacterium GWF2_29_10	1797340	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	2.81514	29	-	MEOD01	110	2084	1959	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313823	GCA_001768555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/555/GCA_001768555.1_ASM176855v1	27774985	-
Bacteroidetes bacterium GWF2_33_16	1797341	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.32892	32.5	-	MEOE01	36	3555	3476	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313820	GCA_001768565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/565/GCA_001768565.1_ASM176856v1	27774985	-
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	1797178	PRJNA288027	288027	Acidobacteria	unclassified Acidobacteria	3.86037	57.6	-	MEKP01	397	3877	2855	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315915	GCA_001768595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/595/GCA_001768595.1_ASM176859v1	27774985	-
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	1797193	PRJNA288027	288027	Acidobacteria	unclassified Acidobacteria	5.30922	67	-	MELE01	258	4806	4334	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316117	GCA_001768615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/615/GCA_001768615.1_ASM176861v1	27774985	-
Actinobacteria bacterium RBG_13_55_18	1797197	PRJNA288027	288027	Terrabacteria group	Actinobacteria	2.59928	54.5	-	MELK01	55	2503	2356	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313996	GCA_001768645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/645/GCA_001768645.1_ASM176864v1	27774985	-
Actinobacteria bacterium RBG_16_64_13	1797200	PRJNA288027	288027	Terrabacteria group	Actinobacteria	2.62268	63.1	-	MELN01	75	2565	2101	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314254	GCA_001768675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/675/GCA_001768675.1_ASM176867v1	27774985	-
Actinobacteria bacterium RBG_16_70_17	1797205	PRJNA288027	288027	Terrabacteria group	Actinobacteria	2.13371	68.2	-	MELS01	151	2219	1487	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313696	GCA_001768695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/695/GCA_001768695.1_ASM176869v1	27774985	-
Actinobacteria bacterium RBG_19FT_COMBO_70_19	1797208	PRJNA288027	288027	Terrabacteria group	Actinobacteria	2.39093	68	-	MELV01	169	2630	1716	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314069	GCA_001768715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/715/GCA_001768715.1_ASM176871v1	27774985	-
Alphaproteobacteria bacterium GWA2_41_27	1797210	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	1.56724	42.4	-	MELY01	55	1553	1472	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314101	GCA_001768725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/725/GCA_001768725.1_ASM176872v1	27774985	-
Alphaproteobacteria bacterium GWF2_58_20	1797213	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	1.7117	56.9	-	MEMB01	7	1662	1603	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314139	GCA_001768735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/735/GCA_001768735.1_ASM176873v1	27774985	-
Alphaproteobacteria bacterium RBG_16_42_14	1797214	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	1.63935	42.3	-	MEMC01	66	1610	1503	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313727	GCA_001768775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/775/GCA_001768775.1_ASM176877v1	27774985	-
Alphaproteobacteria bacterium RBG_16_64_48	1797215	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	1.07803	64	-	MEMD01	138	1128	902	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313723	GCA_001768795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/795/GCA_001768795.1_ASM176879v1	27774985	-
Alphaproteobacteria bacterium RIFCSPHIGHO2_01_FULL_40_8	1797216	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	1.05706	39.8	-	MEME01	106	1096	897	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314947	GCA_001768805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/805/GCA_001768805.1_ASM176880v1	27774985	-
Alphaproteobacteria bacterium RIFCSPHIGHO2_12_42_13	1797221	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	1.66158	42.2	-	MEMJ01	82	1650	1549	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313767	GCA_001768825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/825/GCA_001768825.1_ASM176882v1	27774985	-
Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_42_100	1797222	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	1.63825	42.3	-	MEMK01	65	1610	1524	10/18/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04315602	GCA_001768845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/845/GCA_001768845.1_ASM176884v1	27774985	-
Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_45_9	1797223	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	1.71115	45.8	-	MEML01	237	1844	1447	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316125	GCA_001768875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/875/GCA_001768875.1_ASM176887v1	27774985	-
Alphaproteobacteria bacterium RIFCSPLOWO2_01_FULL_45_8	1797227	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	0.764372	44.1	-	MEMP01	64	851	655	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315130	GCA_001768885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/885/GCA_001768885.1_ASM176888v1	27774985	-
Alphaproteobacteria bacterium RIFCSPLOWO2_02_FULL_43_54	1797230	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	1.60396	42.3	-	MEMS01	56	1588	1504	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315934	GCA_001768895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/895/GCA_001768895.1_ASM176889v1	27774985	-
Alphaproteobacteria bacterium RIFCSPLOWO2_12_FULL_40_11	1797231	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	1.43153	40	-	MEMT01	63	1403	1313	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315810	GCA_001768925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/925/GCA_001768925.1_ASM176892v1	27774985	-
Alphaproteobacteria bacterium RIFCSPLOWO2_12_FULL_42_29	1797232	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	1.64639	42.3	-	MEMU01	61	1625	1536	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315866	GCA_001768955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/955/GCA_001768955.1_ASM176895v1	27774985	-
archaeon RBG_16_50_20	1797286	PRJNA288027	288027	unclassified Archaea	unclassified Archaea (miscellaneous)	1.33744	50	-	MEMY01	113	1517	1297	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316260	GCA_001768965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/965/GCA_001768965.1_ASM176896v1	27774985	-
Bacteroidetes bacterium GWA2_31_9b	1797315	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.3473	30.7	-	MENE01	195	3076	2455	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314162	GCA_001769005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/005/GCA_001769005.1_ASM176900v1	27774985	-
Bacteroidetes bacterium GWA2_31_9	1797314	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.96025	30.3	-	MEND01	288	3965	3422	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314154	GCA_001768975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/975/GCA_001768975.1_ASM176897v1	27774985	-
Bacteroidetes bacterium GWA2_32_17	1797316	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.76595	30.9	-	MENF01	234	3667	3496	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313829	GCA_001769035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/035/GCA_001769035.1_ASM176903v1	27774985	-
Bacteroidetes bacterium GWA2_33_15	1797317	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.66937	33.5	-	MENG01	39	3098	3016	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313831	GCA_001769045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/045/GCA_001769045.1_ASM176904v1	27774985	-
Bacteroidetes bacterium GWC2_40_13	1797325	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.82788	40.1	-	MENO01	175	3879	3623	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313805	GCA_001769075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/075/GCA_001769075.1_ASM176907v1	27774985	-
Bacteroidetes bacterium GWE2_29_8	1797331	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.2379	29	-	MENU01	216	2445	2153	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313833	GCA_001769085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/085/GCA_001769085.1_ASM176908v1	27774985	-
Bacteroidetes bacterium GWE2_42_42	1797339	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.88901	42.6	-	MEOC01	45	3210	3135	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313815	GCA_001769115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/115/GCA_001769115.1_ASM176911v1	27774985	-
Bacteroidetes bacterium GWF2_35_48	1797343	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	5.98032	34.8	-	MEOG01	142	4354	4206	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313822	GCA_001769125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/125/GCA_001769125.1_ASM176912v1	27774985	-
Bacteroidetes bacterium GWF2_39_10	1797345	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	2.51893	39.1	-	MEOI01	42	2248	2118	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313837	GCA_001769145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/145/GCA_001769145.1_ASM176914v1	27774985	-
Bacteroidetes bacterium GWF2_40_13	1797346	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	5.02807	40	-	MEOJ01	71	3962	3813	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313809	GCA_001769175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/175/GCA_001769175.1_ASM176917v1	27774985	-
Bacteroidetes bacterium GWF2_40_14	1797347	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.36002	39.8	-	MEOK01	42	2919	2833	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313839	GCA_001769195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/195/GCA_001769195.1_ASM176919v1	27774985	-
Bacteroidetes bacterium GWF2_41_31	1797348	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.51699	41.2	-	MEOL01	52	3756	3671	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313806	GCA_001769215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/215/GCA_001769215.1_ASM176921v1	27774985	-
Bacteroidetes bacterium GWF2_42_66	1797351	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	6.04457	42.1	-	MEOO01	52	4903	4810	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313811	GCA_001769245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/245/GCA_001769245.1_ASM176924v1	27774985	-
Bacteroidetes bacterium GWF2_41_9	1797350	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.21522	40.7	-	MEON01	225	3588	3173	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313825	GCA_001769225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/225/GCA_001769225.1_ASM176922v1	27774985	-
Bacteroidetes bacterium GWF2_43_63	1797353	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.98315	42.6	-	MEOQ01	51	3269	3198	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313814	GCA_001769275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/275/GCA_001769275.1_ASM176927v1	27774985	-
Bacteroidetes bacterium GWF2_49_14	1797354	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.52178	48.5	-	MEOR01	163	2900	2622	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313843	GCA_001769295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/295/GCA_001769295.1_ASM176929v1	27774985	-
Bacteroidetes bacterium RBG_13_42_15	1797355	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.95156	40.5	-	MEOS01	350	3421	2605	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313992	GCA_001769315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/315/GCA_001769315.1_ASM176931v1	27774985	-
Bacteroidetes bacterium RBG_13_44_24	1797357	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	0.835268	43.2	-	MEOU01	84	755	663	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314090	GCA_001769325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/325/GCA_001769325.1_ASM176932v1	27774985	-
Bacteroidetes bacterium RIFCSPLOWO2_02_FULL_36_8	1797362	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.55638	36.6	-	MEOZ01	188	2957	2430	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315986	GCA_001769355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/355/GCA_001769355.1_ASM176935v1	27774985	-
Bacteroidetes bacterium RIFCSPLOWO2_12_FULL_35_15	1797364	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	5.38632	34.6	-	MEPB01	110	4360	4230	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315760	GCA_001769385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/385/GCA_001769385.1_ASM176938v1	27774985	-
Bacteroidetes bacterium RIFCSPLOWO2_12_FULL_31_6	1797363	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.20854	31.4	-	MEPA01	831	3521	2645	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316198	GCA_001769375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/375/GCA_001769375.1_ASM176937v1	27774985	-
Bacteroidetes bacterium RIFOXYA12_FULL_35_11	1797367	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	5.19065	34.8	-	MEPE01	292	3851	3558	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314396	GCA_001769395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/395/GCA_001769395.1_ASM176939v1	27774985	-
Bacteroidetes bacterium RIFOXYA2_FULL_33_7	1797370	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.34349	32.7	-	MEPH01	273	2830	2323	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314357	GCA_001769435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/435/GCA_001769435.1_ASM176943v1	27774985	-
Bacteroidetes bacterium RIFOXYB12_FULL_41_6	1797371	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	2.21979	41	-	MEPI01	263	2100	1593	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314459	GCA_001769455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/455/GCA_001769455.1_ASM176945v1	27774985	-
Bacteroidetes bacterium RIFOXYC2_FULL_39_11	1797375	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	2.52052	38.9	-	MEPM01	54	2272	2078	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314586	GCA_001769465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/465/GCA_001769465.1_ASM176946v1	27774985	-
Bdellovibrionales bacterium GWB1_52_6	1797385	PRJNA288027	288027	Proteobacteria	Oligoflexia	3.54386	52.1	-	MEPQ01	133	3353	2933	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314118	GCA_001769475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/475/GCA_001769475.1_ASM176947v1	27774985	-
Bacteroidetes bacterium GWF2_33_38	1797342	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.93325	32.7	-	MEOF01	70	3123	3039	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313819	GCA_001769505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/505/GCA_001769505.1_ASM176950v1	27774985	-
Bacteroidetes bacterium GWF2_38_335	1797344	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	5.268	37.8	-	MEOH01	29	4133	4058	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313812	GCA_001769535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/535/GCA_001769535.1_ASM176953v1	27774985	-
Bacteroidetes bacterium GWF2_41_61	1797349	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	2.07489	41	-	MEOM01	124	1852	1704	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313838	GCA_001769545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/545/GCA_001769545.1_ASM176954v1	27774985	-
Bacteroidetes bacterium GWF2_43_11	1797352	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.36913	43.4	-	MEOP01	100	3507	3301	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313830	GCA_001769555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/555/GCA_001769555.1_ASM176955v1	27774985	-
Bacteroidetes bacterium RBG_13_43_22	1797356	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.27492	41.7	-	MEOT01	252	2770	2432	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313685	GCA_001769575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/575/GCA_001769575.1_ASM176957v1	27774985	-
Bacteroidetes bacterium RBG_19FT_COMBO_42_10	1797359	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	1.81055	40.6	-	MEOW01	183	1742	1004	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313671	GCA_001769625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/625/GCA_001769625.1_ASM176962v1	27774985	-
Bacteroidetes bacterium RBG_13_46_8	1797358	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	2.63698	40.6	-	MEOV01	311	2390	887	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314008	GCA_001769615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/615/GCA_001769615.1_ASM176961v1	27774985	-
Bacteroidetes bacterium RBG_19FT_COMBO_42_7	1797360	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.3452	39.5	-	MEOX01	331	3203	1662	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313667	GCA_001769635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/635/GCA_001769635.1_ASM176963v1	27774985	-
Bacteroidetes bacterium RIFCSPLOWO2_12_FULL_37_12	1797365	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.937	36.8	-	MEPC01	43	3063	2940	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315811	GCA_001769655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/655/GCA_001769655.1_ASM176965v1	27774985	-
Bacteroidetes bacterium RIFOXYA12_FULL_33_9	1797366	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	2.92742	32.8	-	MEPD01	280	2454	2108	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314386	GCA_001769695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/695/GCA_001769695.1_ASM176969v1	27774985	-
Bacteroidetes bacterium RIFOXYA12_FULL_38_20	1797368	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	5.03625	37.9	-	MEPF01	55	3896	3815	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314402	GCA_001769705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/705/GCA_001769705.1_ASM176970v1	27774985	-
Bacteroidetes bacterium RIFOXYA12_FULL_40_10	1797369	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	2.42314	40.6	-	MEPG01	161	2172	1846	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314387	GCA_001769725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/725/GCA_001769725.1_ASM176972v1	27774985	-
Bacteroidetes bacterium RIFOXYB2_FULL_35_7	1797372	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.77002	34.7	-	MEPJ01	398	2949	2325	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314430	GCA_001769745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/745/GCA_001769745.1_ASM176974v1	27774985	-
Bacteroidetes bacterium RIFOXYB2_FULL_39_7	1797373	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	2.09678	39.3	-	MEPK01	145	1963	1664	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314443	GCA_001769775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/775/GCA_001769775.1_ASM176977v1	27774985	-
Bacteroidetes bacterium RIFOXYC12_FULL_35_7	1797374	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	5.35884	34.5	-	MEPL01	608	4316	3500	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314612	GCA_001769785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/785/GCA_001769785.1_ASM176978v1	27774985	-
Bdellovibrionales bacterium GWA1_52_35	1797383	PRJNA288027	288027	Proteobacteria	Oligoflexia	3.73465	52.2	-	MEPO01	35	3403	3338	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313918	GCA_001769805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/805/GCA_001769805.1_ASM176980v1	27774985	-
Bdellovibrionales bacterium GWB1_55_8	1797386	PRJNA288027	288027	Proteobacteria	Oligoflexia	3.77723	55.1	-	MEPR01	96	3544	3293	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313915	GCA_001769835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/835/GCA_001769835.1_ASM176983v1	27774985	-
Bdellovibrionales bacterium GWA2_49_15	1797384	PRJNA288027	288027	Proteobacteria	Oligoflexia	4.86221	46.6	-	MEPP01	32	4502	4409	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313907	GCA_001769855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/855/GCA_001769855.1_ASM176985v1	27774985	-
Bacteroidetes bacterium RIFOXYC2_FULL_40_12	1797376	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	5.09039	40	-	MEPN01	83	4029	3826	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314558	GCA_001769865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/865/GCA_001769865.1_ASM176986v1	27774985	-
Bacteroidetes bacterium RIFCSPHIGHO2_02_FULL_44_7	1797361	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.55245	43.9	-	MEOY01	1851	4113	2809	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315545	GCA_001769845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/845/GCA_001769845.1_ASM176984v1	27774985	-
Bdellovibrionales bacterium GWC1_52_8	1797387	PRJNA288027	288027	Proteobacteria	Oligoflexia	3.11979	51.9	-	MEPS01	232	3077	2461	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314191	GCA_001769915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/915/GCA_001769915.1_ASM176991v1	27774985	-
Bdellovibrionales bacterium RIFCSPHIGHO2_02_FULL_40_15	1797390	PRJNA288027	288027	Proteobacteria	Oligoflexia	2.93817	40.2	-	MEPV01	26	2898	2820	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315470	GCA_001769935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/935/GCA_001769935.1_ASM176993v1	27774985	-
Bdellovibrionales bacterium RBG_16_40_8	1797388	PRJNA288027	288027	Proteobacteria	Oligoflexia	2.47184	39.6	-	MEPT01	131	2613	2003	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314041	GCA_001769925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/925/GCA_001769925.1_ASM176992v1	27774985	-
Bdellovibrionales bacterium RIFOXYA1_FULL_36_14	1797391	PRJNA288027	288027	Proteobacteria	Oligoflexia	2.05681	35.6	-	MEPW01	58	1861	1765	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314323	GCA_001769975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/975/GCA_001769975.1_ASM176997v1	27774985	-
Bdellovibrionales bacterium RIFOXYA1_FULL_38_20	1797392	PRJNA288027	288027	Proteobacteria	Oligoflexia	2.04849	37.2	-	MEPX01	45	1912	1869	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314302	GCA_001769995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/769/995/GCA_001769995.1_ASM176999v1	27774985	-
Bdellovibrionales bacterium RIFOXYC1_FULL_37_79	1797395	PRJNA288027	288027	Proteobacteria	Oligoflexia	4.36488	37	-	MEQB01	74	4047	3956	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314538	GCA_001770015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/015/GCA_001770015.1_ASM177001v1	27774985	-
Bdellovibrionales bacterium RIFOXYC1_FULL_39_130	1797396	PRJNA288027	288027	Proteobacteria	Oligoflexia	3.98759	39.2	-	MEQC01	68	3613	3538	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314525	GCA_001770035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/035/GCA_001770035.1_ASM177003v1	27774985	-
Bdellovibrionales bacterium RIFOXYB2_FULL_36_6	1797394	PRJNA288027	288027	Proteobacteria	Oligoflexia	1.96628	35.6	-	MEQA01	892	1969	1297	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314449	GCA_001770005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/005/GCA_001770005.1_ASM177000v1	27774985	-
Bdellovibrionales bacterium RIFOXYC12_FULL_39_17	1797398	PRJNA288027	288027	Proteobacteria	Oligoflexia	3.90106	39.2	-	MEQE01	75	3517	3438	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314606	GCA_001770085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/085/GCA_001770085.1_ASM177008v1	27774985	-
Bdellovibrionales bacterium RIFOXYC1_FULL_54_43	1797397	PRJNA288027	288027	Proteobacteria	Oligoflexia	3.65899	54.5	-	MEQD01	508	3556	3116	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314549	GCA_001770075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/075/GCA_001770075.1_ASM177007v1	27774985	-
Bdellovibrionales bacterium RIFOXYD1_FULL_36_51	1797400	PRJNA288027	288027	Proteobacteria	Oligoflexia	4.27245	37	-	MEQG01	75	3954	3860	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314730	GCA_001770105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/105/GCA_001770105.1_ASM177010v1	27774985	-
Bdellovibrionales bacterium RIFOXYD1_FULL_39_84	1797401	PRJNA288027	288027	Proteobacteria	Oligoflexia	3.96094	39.2	-	MEQH01	65	3583	3513	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314713	GCA_001770125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/125/GCA_001770125.1_ASM177012v1	27774985	-
Bdellovibrionales bacterium RIFOXYD1_FULL_53_11	1797403	PRJNA288027	288027	Proteobacteria	Oligoflexia	3.37442	53.2	-	MEQJ01	154	3360	2853	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314736	GCA_001770165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/165/GCA_001770165.1_ASM177016v1	27774985	-
Bdellovibrionales bacterium RIFOXYD1_FULL_44_7	1797402	PRJNA288027	288027	Proteobacteria	Oligoflexia	2.3496	42.4	-	MEQI01	725	2318	1226	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316191	GCA_001770155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/155/GCA_001770155.1_ASM177015v1	27774985	-
Bdellovibrionales bacterium RIFOXYD1_FULL_55_31	1797404	PRJNA288027	288027	Proteobacteria	Oligoflexia	3.69177	54.5	-	MEQK01	215	3476	3247	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314756	GCA_001770175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/175/GCA_001770175.1_ASM177017v1	27774985	-
Bdellovibrionales bacterium RIFOXYD12_FULL_39_22	1797405	PRJNA288027	288027	Proteobacteria	Oligoflexia	3.94759	39.2	-	MEQL01	62	3577	3497	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314625	GCA_001770205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/205/GCA_001770205.1_ASM177020v1	27774985	-
Betaproteobacteria bacterium RBG_16_58_11	1797476	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	2.33065	56.8	-	MEQN01	160	2531	1869	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314022	GCA_001770235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/235/GCA_001770235.1_ASM177023v1	27774985	-
Betaproteobacteria bacterium RBG_16_64_18	1797477	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	3.907	64.2	-	MEQO01	119	3681	3366	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313699	GCA_001770245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/245/GCA_001770245.1_ASM177024v1	27774985	-
Betaproteobacteria bacterium RBG_16_64_9	1797478	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	1.96703	61.6	-	MEQP01	245	2178	1163	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313725	GCA_001770255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/255/GCA_001770255.1_ASM177025v1	27774985	-
Betaproteobacteria bacterium RBG_16_66_20	1797479	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	2.94535	65.9	-	MEQQ01	155	3095	2696	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313742	GCA_001770285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/285/GCA_001770285.1_ASM177028v1	27774985	-
Betaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_69_13	1797481	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	2.90947	68	-	MEQS01	243	3210	2650	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315548	GCA_001770315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/315/GCA_001770315.1_ASM177031v1	27774985	-
Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14	1797482	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	3.93809	64.1	-	MEQT01	304	3965	3579	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313789	GCA_001770325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/325/GCA_001770325.1_ASM177032v1	27774985	-
Betaproteobacteria bacterium RIFCSPLOWO2_02_67_12	1797483	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	2.92291	67.1	-	MEQU01	274	3088	2732	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314085	GCA_001770345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/345/GCA_001770345.1_ASM177034v1	27774985	-
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	1797484	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	4.40435	61.4	-	MEQV01	321	4360	3663	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315923	GCA_001770355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/355/GCA_001770355.1_ASM177035v1	27774985	-
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_79	1797485	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	1.17425	62.4	-	MEQW01	128	1144	1046	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316050	GCA_001770395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/395/GCA_001770395.1_ASM177039v1	27774985	-
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_63_19	1797486	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	4.65303	62.3	-	MEQX01	116	4234	3982	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315920	GCA_001770415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/415/GCA_001770415.1_ASM177041v1	27774985	-
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_65_20	1797488	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	3.58921	64.4	-	MEQZ01	257	3411	3022	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315921	GCA_001770425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/425/GCA_001770425.1_ASM177042v1	27774985	-
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_65_24	1797489	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	4.27396	64.9	-	MERA01	362	4200	3677	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315989	GCA_001770435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/435/GCA_001770435.1_ASM177043v1	27774985	-
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14	1797490	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	2.42994	66.1	-	MERB01	62	2356	2106	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316051	GCA_001770475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/475/GCA_001770475.1_ASM177047v1	27774985	-
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_19	1797491	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	1.67272	66.9	-	MERC01	119	1777	1471	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315922	GCA_001770495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/495/GCA_001770495.1_ASM177049v1	27774985	-
Betaproteobacteria bacterium RIFCSPLOWO2_12_61_14	1797494	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	1.21064	61.3	-	MERF01	481	1308	940	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313802	GCA_001770505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/505/GCA_001770505.1_ASM177050v1	27774985	-
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13b	1797496	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	3.14749	62.4	-	MERH01	292	3196	2713	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315868	GCA_001770525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/525/GCA_001770525.1_ASM177052v1	27774985	-
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13	1797498	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	4.69927	62.3	-	MERJ01	307	4401	3993	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315813	GCA_001770545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/545/GCA_001770545.1_ASM177054v1	27774985	-
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_64_23	1797499	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	3.14806	63.7	-	MERK01	228	3047	2764	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315763	GCA_001770575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/575/GCA_001770575.1_ASM177057v1	27774985	-
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	1797501	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	6.78886	66.1	-	MERM01	272	6919	6451	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315869	GCA_001770585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/585/GCA_001770585.1_ASM177058v1	27774985	-
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_66_14	1797502	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	4.18663	65.4	-	MERN01	331	4120	3588	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315815	GCA_001770615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/615/GCA_001770615.1_ASM177061v1	27774985	-
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28	1797503	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	3.66859	67.1	-	MERO01	248	3744	3479	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315765	GCA_001770625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/625/GCA_001770625.1_ASM177062v1	27774985	-
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20	1797505	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	3.48262	68.4	-	MERQ01	109	3625	3440	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315871	GCA_001770655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/655/GCA_001770655.1_ASM177065v1	27774985	-
Burkholderiales bacterium GWA2_64_37	1797549	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	5.43573	64.5	-	MERR01	27	4922	4799	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314111	GCA_001770675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/675/GCA_001770675.1_ASM177067v1	27774985	-
Burkholderiales bacterium GWE1_65_30	1797550	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	5.11747	65.7	-	MERS01	26	4834	4718	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313894	GCA_001770695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/695/GCA_001770695.1_ASM177069v1	27774985	-
Burkholderiales bacterium GWF1_66_17	1797551	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	5.1163	65.7	-	MERT01	28	4832	4716	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313893	GCA_001770705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/705/GCA_001770705.1_ASM177070v1	27774985	-
Burkholderiales bacterium RIFCSPHIGHO2_01_FULL_63_240	1797552	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	4.11965	66.7	-	MERU01	13	3604	3505	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314864	GCA_001770725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/725/GCA_001770725.1_ASM177072v1	27774985	-
Burkholderiales bacterium RIFCSPHIGHO2_01_FULL_64_960	1797553	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	5.96091	64.5	-	MERV01	34	5443	5316	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314863	GCA_001770745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/745/GCA_001770745.1_ASM177074v1	27774985	-
Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_63_20	1797558	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	3.69472	64.2	-	MESA01	48	3329	3192	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315604	GCA_001770775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/775/GCA_001770775.1_ASM177077v1	27774985	-
Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_61_11	1797557	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	3.77228	60.1	-	MERZ01	416	3806	3038	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315631	GCA_001770785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/785/GCA_001770785.1_ASM177078v1	27774985	-
Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_69_20	1797561	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	5.5293	69.4	-	MESD01	219	4860	4478	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315577	GCA_001770815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/815/GCA_001770815.1_ASM177081v1	27774985	-
Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_65_48	1797559	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	5.51588	64.6	-	MESB01	427	5146	4744	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315575	GCA_001770805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/805/GCA_001770805.1_ASM177080v1	27774985	-
Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36	1797562	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	5.40753	55.9	-	MESE01	151	4934	4742	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316054	GCA_001770855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/855/GCA_001770855.1_ASM177085v1	27774985	-
Burkholderiales bacterium RIFCSPLOWO2_02_FULL_66_35	1797563	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	4.16371	66.1	-	MESF01	214	4059	3796	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316004	GCA_001770865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/865/GCA_001770865.1_ASM177086v1	27774985	-
Burkholderiales bacterium RIFCSPLOWO2_02_FULL_67_64	1797564	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	5.19144	66.9	-	MESG01	174	4957	4713	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316052	GCA_001770905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/905/GCA_001770905.1_ASM177090v1	27774985	-
Burkholderiales bacterium RIFCSPLOWO2_12_67_14	1797565	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	5.10574	66.3	-	MESH01	293	5018	4524	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313793	GCA_001770895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/895/GCA_001770895.1_ASM177089v1	27774985	-
Burkholderiales bacterium RIFCSPLOWO2_12_FULL_61_40	1797566	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	4.99379	60.3	-	MESI01	132	4550	4344	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315766	GCA_001770935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/935/GCA_001770935.1_ASM177093v1	27774985	-
Burkholderiales bacterium RIFCSPLOWO2_12_FULL_65_40	1797569	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	3.76897	65.5	-	MESL01	57	3470	3358	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315764	GCA_001770955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/955/GCA_001770955.1_ASM177095v1	27774985	-
Burkholderiales bacterium RIFOXYC12_FULL_60_6	1797571	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	4.49236	57.7	-	MESN01	868	4563	3201	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314617	GCA_001770985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/985/GCA_001770985.1_ASM177098v1	27774985	-
Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210	1797570	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	4.91284	66.6	-	MESM01	1505	5213	4061	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315870	GCA_001770965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/965/GCA_001770965.1_ASM177096v1	27774985	-
Burkholderiales bacterium RIFOXYC12_FULL_65_23	1797572	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	3.65954	65.8	-	MESO01	76	3398	3241	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314607	GCA_001770995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/770/995/GCA_001770995.1_ASM177099v1	27774985	-
Burkholderiales bacterium RIFOXYC2_FULL_59_8	1797573	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	1.83081	56.9	-	MESP01	222	1965	1117	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314582	GCA_001771035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/035/GCA_001771035.1_ASM177103v1	27774985	-
Caldithrix sp. RBG_13_44_9	1797576	PRJNA288027	288027	Calditrichaeota	Calditrichae	3.55489	42.4	-	MESS01	156	3190	2239	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314015	GCA_001771055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/055/GCA_001771055.1_ASM177105v1	27774985	-
Burkholderiales bacterium RIFOXYD12_FULL_59_19	1797574	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	4.05035	59	-	MESQ01	97	3908	3750	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314624	GCA_001771065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/065/GCA_001771065.1_ASM177106v1	27774985	-
candidate division CPR2 bacterium GWD1_39_7	1797698	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.67454	38.2	-	MEST01	74	777	643	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313948	GCA_001771075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/075/GCA_001771075.1_ASM177107v1	27774985	-
candidate division CPR2 bacterium GWD2_39_7	1797699	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.07291	38.8	-	MESU01	58	1153	976	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313947	GCA_001771115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/115/GCA_001771115.1_ASM177111v1	27774985	-
candidate division CPR3 bacterium GWF2_35_18	1797701	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.13616	35	-	MESW01	10	1115	1046	10/18/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04313865	GCA_001771135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/135/GCA_001771135.1_ASM177113v1	27774985	-
candidate division CPR3 bacterium RIFOXYA2_FULL_35_13	1797702	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.15358	34.9	-	MESX01	16	1135	1056	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314371	GCA_001771155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/155/GCA_001771155.1_ASM177115v1	27774985	-
candidate division CPR3 bacterium RIFOXYC2_FULL_35_7	1797704	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.04365	34.3	-	MESZ01	194	1113	785	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314597	GCA_001771165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/165/GCA_001771165.1_ASM177116v1	27774985	-
candidate division Kazan bacterium RIFCSPHIGHO2_01_FULL_44_14	1798536	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.699981	45.6	-	METB01	1	701	648	10/18/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04316212	GCA_001771185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/185/GCA_001771185.1_ASM177118v1	27774985	-
candidate division Kazan bacterium RIFCSPLOWO2_01_FULL_45_19	1798538	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.699981	45.6	-	METD01	1	701	648	10/18/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04316240	GCA_001771215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/215/GCA_001771215.1_ASM177121v1	27774985	-
candidate division KSB1 bacterium RBG_16_48_16	1798559	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	3.93787	47.7	-	METF01	326	3493	2636	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313703	GCA_001771235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/235/GCA_001771235.1_ASM177123v1	27774985	-
candidate division NC10 bacterium RIFCSPLOWO2_02_FULL_66_22	1801658	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	4.42432	65.7	-	METH01	218	4261	3942	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315927	GCA_001771245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/245/GCA_001771245.1_ASM177124v1	27774985	-
candidate division Kazan bacterium RIFCSPLOWO2_01_FULL_48_13	1798539	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.790931	48.7	-	METE01	20	795	687	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315147	GCA_001771275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/275/GCA_001771275.1_ASM177127v1	27774985	-
candidate division NC10 bacterium RIFCSPLOWO2_12_FULL_66_18	1801659	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	4.34821	65.9	-	METI01	253	4257	3933	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315823	GCA_001771285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/285/GCA_001771285.1_ASM177128v1	27774985	-
candidate division TM6 bacterium RIFCSPHIGHO2_12_FULL_36_22	1802376	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.906465	35.9	-	METK01	21	905	844	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315658	GCA_001771315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/315/GCA_001771315.1_ASM177131v1	27774985	-
candidate division TM6 bacterium RIFCSPHIGHO2_12_FULL_32_22	1802375	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.23428	32.1	-	METJ01	93	1415	1272	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315754	GCA_001771325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/325/GCA_001771325.1_ASM177132v1	27774985	-
candidate division WOR-1 bacterium RIFCSPHIGHO2_02_FULL_53_26	1802566	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.51234	54	-	METO01	34	1551	1466	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315476	GCA_001771345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/345/GCA_001771345.1_ASM177134v1	27774985	-
candidate division WOR-1 bacterium RIFCSPLOWO2_02_FULL_46_20	1802567	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.37028	45.6	-	METP01	70	1386	1281	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315926	GCA_001771365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/365/GCA_001771365.1_ASM177136v1	27774985	-
candidate division WOR-1 bacterium RIFOXYA12_FULL_36_13	1802569	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.97688	36.1	-	METR01	76	1897	1785	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314403	GCA_001771395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/395/GCA_001771395.1_ASM177139v1	27774985	-
candidate division WOR-1 bacterium RIFOXYA12_FULL_52_29	1802571	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.6687	51.8	-	METT01	1	1598	1543	10/18/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04316237	GCA_001771425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/425/GCA_001771425.1_ASM177142v1	27774985	-
candidate division WOR-1 bacterium RIFOXYA12_FULL_43_27	1802570	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.72198	46.3	-	METS01	9	1747	1677	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314397	GCA_001771415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/415/GCA_001771415.1_ASM177141v1	27774985	-
candidate division WOR-1 bacterium RIFOXYA2_FULL_37_7	1802573	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.30937	37.1	-	METV01	132	1395	1075	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314367	GCA_001771455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/455/GCA_001771455.1_ASM177145v1	27774985	-
candidate division WOR-1 bacterium RIFOXYA2_FULL_51_19	1802576	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.6687	51.8	-	METY01	1	1598	1543	10/18/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04316233	GCA_001771465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/465/GCA_001771465.1_ASM177146v1	27774985	-
candidate division WOR-1 bacterium RIFOXYB12_FULL_52_16	1802577	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.65079	51.8	-	METZ01	4	1598	1534	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314467	GCA_001771495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/495/GCA_001771495.1_ASM177149v1	27774985	-
candidate division WOR-1 bacterium RIFOXYB2_FULL_36_35	1802578	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.95129	36.1	-	MEUA01	67	1883	1777	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314411	GCA_001771505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/505/GCA_001771505.1_ASM177150v1	27774985	-
candidate division WOR-1 bacterium RIFOXYB2_FULL_42_35	1802580	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.78925	41.6	-	MEUC01	51	1759	1692	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314412	GCA_001771545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/545/GCA_001771545.1_ASM177154v1	27774985	-
candidate division WOR-1 bacterium RIFOXYB2_FULL_37_13	1802579	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.7884	37	-	MEUB01	71	1795	1666	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314431	GCA_001771535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/535/GCA_001771535.1_ASM177153v1	27774985	-
candidate division WOR-1 bacterium RIFOXYB2_FULL_45_9	1802581	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.6687	51.8	-	MEUD01	1	1597	1542	10/18/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04316221	GCA_001771575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/575/GCA_001771575.1_ASM177157v1	27774985	-
candidate division WOR-1 bacterium RIFOXYB2_FULL_46_45	1802582	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.6989	46.3	-	MEUE01	4	1715	1650	10/18/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04314413	GCA_001771585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/585/GCA_001771585.1_ASM177158v1	27774985	-
candidate division WOR-1 bacterium RIFOXYB2_FULL_48_7	1802583	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.3192	48	-	MEUF01	98	1369	1126	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314432	GCA_001771615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/615/GCA_001771615.1_ASM177161v1	27774985	-
candidate division WOR-1 bacterium RIFOXYC12_FULL_54_18	1802584	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.6687	51.8	-	MEUG01	1	1598	1543	10/18/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04316238	GCA_001771625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/625/GCA_001771625.1_ASM177162v1	27774985	-
candidate division WOR-1 bacterium RIFOXYC2_FULL_37_10	1802585	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.77612	37	-	MEUH01	94	1787	1555	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316178	GCA_001771655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/655/GCA_001771655.1_ASM177165v1	27774985	-
candidate division WOR-1 bacterium RIFOXYC2_FULL_41_25	1802586	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.81044	41.5	-	MEUI01	50	1784	1715	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314583	GCA_001771665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/665/GCA_001771665.1_ASM177166v1	27774985	-
candidate division WOR-1 bacterium RIFOXYC2_FULL_46_14	1802587	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.69578	46.3	-	MEUJ01	12	1734	1631	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314559	GCA_001771695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/695/GCA_001771695.1_ASM177169v1	27774985	-
candidate division WOR-1 bacterium RIFOXYD2_FULL_36_8	1802588	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.30835	36	-	MEUK01	133	1374	990	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314647	GCA_001771705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/705/GCA_001771705.1_ASM177170v1	27774985	-
candidate division WS6 bacterium RIFOXYB1_FULL_33_14	1817896	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.493643	31.8	-	MEUN01	115	554	359	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314521	GCA_001771745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/745/GCA_001771745.1_ASM177174v1	27774985	-
candidate division WOR-3 bacterium RBG_13_43_14	1802590	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.8516	42.3	-	MEUM01	169	1746	1382	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314006	GCA_001771735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/735/GCA_001771735.1_ASM177173v1	27774985	-
candidate division WS6 bacterium RIFOXYB1_FULL_33_15	1817897	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.704381	32.8	-	MEUO01	15	722	657	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314490	GCA_001771775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/775/GCA_001771775.1_ASM177177v1	27774985	-
candidate division WS6 bacterium RIFOXYC1_FULL_33_10	1802606	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.473372	31.4	-	MEUP01	160	486	298	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316186	GCA_001771785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/785/GCA_001771785.1_ASM177178v1	27774985	-
Bdellovibrionales bacterium RIFCSPHIGHO2_01_FULL_40_29	1797389	PRJNA288027	288027	Proteobacteria	Oligoflexia	2.92673	40.2	-	MEPU01	13	2868	2818	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314775	GCA_001771815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/815/GCA_001771815.1_ASM177181v1	27774985	-
Bdellovibrionales bacterium RIFOXYB1_FULL_37_110	1797393	PRJNA288027	288027	Proteobacteria	Oligoflexia	4.37027	37	-	MEPY01	84	4090	3986	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314502	GCA_001771825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/825/GCA_001771825.1_ASM177182v1	27774985	-
Bdellovibrionales bacterium RIFOXYB1_FULL_39_21	1797406	PRJNA288027	288027	Proteobacteria	Oligoflexia	3.95791	39.2	-	MEPZ01	66	3585	3509	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314506	GCA_001771845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/845/GCA_001771845.1_ASM177184v1	27774985	-
Bdellovibrionales bacterium RIFOXYC2_FULL_39_8	1797399	PRJNA288027	288027	Proteobacteria	Oligoflexia	3.17666	38.7	-	MEQF01	540	3264	2251	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314572	GCA_001771865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/865/GCA_001771865.1_ASM177186v1	27774985	-
Betaproteobacteria bacterium RBG_16_56_24	1797475	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	2.64791	56.2	-	MEQM01	175	2605	2382	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313700	GCA_001771895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/895/GCA_001771895.1_ASM177189v1	27774985	-
Betaproteobacteria bacterium RBG_19FT_COMBO_58_11	1797480	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	2.02312	55.9	-	MEQR01	209	2307	1428	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314065	GCA_001771905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/905/GCA_001771905.1_ASM177190v1	27774985	-
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_64_12	1797487	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	1.91288	63.2	-	MEQY01	184	2030	1422	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315988	GCA_001771915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/915/GCA_001771915.1_ASM177191v1	27774985	-
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26	1797492	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	3.45856	66.5	-	MERD01	126	3453	3217	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315990	GCA_001771935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/935/GCA_001771935.1_ASM177193v1	27774985	-
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_68_150	1797493	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	2.43158	67.5	-	MERE01	219	2459	2272	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316053	GCA_001771975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/975/GCA_001771975.1_ASM177197v1	27774985	-
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13	1797495	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	5.88314	61.6	-	MERG01	469	5806	5193	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315812	GCA_001771985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/771/985/GCA_001771985.1_ASM177198v1	27774985	-
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58	1797497	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	5.87674	61.8	-	MERI01	277	5682	5370	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315762	GCA_001772005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/005/GCA_001772005.1_ASM177200v1	27774985	-
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_110	1797500	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	2.81152	64.5	-	MERL01	234	2676	2479	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315814	GCA_001772025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/025/GCA_001772025.1_ASM177202v1	27774985	-
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_19	1797504	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	1.61257	68.5	-	MERP01	123	1724	1550	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315816	GCA_001772055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/055/GCA_001772055.1_ASM177205v1	27774985	-
Burkholderiales bacterium RIFCSPHIGHO2_02_FULL_64_19	1797554	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	5.35313	64.6	-	MERW01	42	4861	4727	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315393	GCA_001772075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/075/GCA_001772075.1_ASM177207v1	27774985	-
Burkholderiales bacterium RIFCSPHIGHO2_12_63_9	1797556	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	1.28266	61.9	-	MERY01	400	1380	1016	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314076	GCA_001772105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/105/GCA_001772105.1_ASM177210v1	27774985	-
Burkholderiales bacterium RIFCSPHIGHO2_02_FULL_66_10	1797555	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	3.57935	65.4	-	MERX01	708	3817	2627	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315320	GCA_001772095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/095/GCA_001772095.1_ASM177209v1	27774985	-
Burkholderiales bacterium RIFCSPLOWO2_12_FULL_64_33	1797567	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	5.6198	64.7	-	MESJ01	53	5097	4975	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315759	GCA_001772145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/145/GCA_001772145.1_ASM177214v1	27774985	-
Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_67_38	1797560	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	5.68067	67	-	MESC01	453	5569	5117	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315603	GCA_001772135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/135/GCA_001772135.1_ASM177213v1	27774985	-
Burkholderiales bacterium RIFCSPLOWO2_12_FULL_64_99	1797568	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	4.17742	64.2	-	MESK01	116	3776	3625	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315817	GCA_001772175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/175/GCA_001772175.1_ASM177217v1	27774985	-
Burkholderiales bacterium RIFOXYD2_FULL_59_8	1797575	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	2.68364	56.8	-	MESR01	528	2850	1581	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314656	GCA_001772185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/185/GCA_001772185.1_ASM177218v1	27774985	-
candidate division CPR3 bacterium RIFOXYB2_FULL_35_8	1797703	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.07154	34.7	-	MESY01	59	1083	917	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314417	GCA_001772225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/225/GCA_001772225.1_ASM177222v1	27774985	-
candidate division CPR3 bacterium GWE2_35_7	1797700	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.749956	34.1	-	MESV01	66	793	618	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314132	GCA_001772215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/215/GCA_001772215.1_ASM177221v1	27774985	-
candidate division Kazan bacterium RBG_13_50_9	1798535	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.625726	50.5	-	META01	7	639	514	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313689	GCA_001772255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/255/GCA_001772255.1_ASM177225v1	27774985	-
candidate division Kazan bacterium RIFCSPHIGHO2_01_FULL_49_10	1798537	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.656967	48.6	-	METC01	39	670	564	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314963	GCA_001772265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/265/GCA_001772265.1_ASM177226v1	27774985	-
candidate division NC10 bacterium RBG_16_65_8	1801657	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.98761	63.7	-	METG01	226	2136	1278	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314052	GCA_001772295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/295/GCA_001772295.1_ASM177229v1	27774985	-
candidate division TM6 bacterium RIFCSPHIGHO2_12_FULL_38_8	1802377	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.665804	38.1	-	METL01	58	741	579	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316129	GCA_001772305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/305/GCA_001772305.1_ASM177230v1	27774985	-
candidate division WOR-1 bacterium RIFCSPHIGHO2_01_FULL_53_15	1802564	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.55726	54	-	METM01	33	1607	1501	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314778	GCA_001772335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/335/GCA_001772335.1_ASM177233v1	27774985	-
candidate division WOR-1 bacterium RIFCSPHIGHO2_02_FULL_45_12	1802565	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.33041	45.3	-	METN01	76	1404	1219	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316132	GCA_001772355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/355/GCA_001772355.1_ASM177235v1	27774985	-
candidate division WOR-1 bacterium RIFCSPLOWO2_12_FULL_45_9	1802568	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.26104	45.2	-	METQ01	67	1297	1171	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315774	GCA_001772375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/375/GCA_001772375.1_ASM177237v1	27774985	-
candidate division WOR-1 bacterium RIFOXYA2_FULL_36_21	1802572	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.98523	36.1	-	METU01	61	1900	1796	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314351	GCA_001772385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/385/GCA_001772385.1_ASM177238v1	27774985	-
candidate division WOR-1 bacterium RIFOXYA2_FULL_41_14	1802574	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.77747	41.5	-	METW01	51	1751	1673	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314368	GCA_001772415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/415/GCA_001772415.1_ASM177241v1	27774985	-
candidate division WOR-1 bacterium RIFOXYA2_FULL_46_56	1802575	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.70581	46.3	-	METX01	5	1721	1655	10/18/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04314353	GCA_001772435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/435/GCA_001772435.1_ASM177243v1	27774985	-
candidate division WOR-1 bacterium RIFOXYD2_FULL_41_8	1802589	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.55946	41.1	-	MEUL01	127	1640	1265	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314701	GCA_001772455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/455/GCA_001772455.1_ASM177245v1	27774985	-
candidate division WS6 bacterium RIFOXYC1_FULL_33_9	1802607	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.6026	32.6	-	MEUQ01	45	659	518	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314557	GCA_001772465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/465/GCA_001772465.1_ASM177246v1	27774985	-
candidate division WS6 bacterium RIFOXYD1_FULL_33_8	1802608	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.520885	32.3	-	MEUR01	71	558	371	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316190	GCA_001772485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/485/GCA_001772485.1_ASM177248v1	27774985	-
candidate division WWE3 bacterium RBG_13_37_7	1802609	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.327913	33.5	-	MEUS01	34	415	173	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316231	GCA_001772515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/515/GCA_001772515.1_ASM177251v1	27774985	-
candidate division WWE3 bacterium RBG_16_37_10	1802610	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.05679	36.1	-	MEUT01	79	1136	910	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313753	GCA_001772535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/535/GCA_001772535.1_ASM177253v1	27774985	-
candidate division WWE3 bacterium RBG_16_52_45	1802611	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.520071	52.1	-	MEUU01	31	600	529	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314276	GCA_001772545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/545/GCA_001772545.1_ASM177254v1	27774985	-
candidate division WWE3 bacterium RBG_19FT_COMBO_34_6	1802612	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.80934	33.1	-	MEUV01	53	970	708	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313670	GCA_001772575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/575/GCA_001772575.1_ASM177257v1	27774985	-
candidate division WWE3 bacterium RIFCSPHIGHO2_01_FULL_35_17	1802614	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.475441	35.2	-	MEUX01	32	514	470	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314866	GCA_001772585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/585/GCA_001772585.1_ASM177258v1	27774985	-
candidate division WWE3 bacterium RIFCSPHIGHO2_01_FULL_40_23	1802616	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.00985	40.5	-	MEUZ01	8	1064	1006	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314869	GCA_001772615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/615/GCA_001772615.1_ASM177261v1	27774985	-
candidate division WWE3 bacterium RIFCSPHIGHO2_01_FULL_42_13	1802617	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.641607	41.9	-	MEVA01	17	726	651	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315039	GCA_001772625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/625/GCA_001772625.1_ASM177262v1	27774985	-
candidate division WWE3 bacterium RIFCSPHIGHO2_01_FULL_48_15	1802619	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.491139	48	-	MEVC01	25	576	501	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314950	GCA_001772655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/655/GCA_001772655.1_ASM177265v1	27774985	-
candidate division WWE3 bacterium RIFCSPLOWO2_01_FULL_39_13	1802624	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.801306	38.9	-	MEVH01	31	865	759	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315135	GCA_001772665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/665/GCA_001772665.1_ASM177266v1	27774985	-
candidate division WWE3 bacterium RIFCSPLOWO2_01_FULL_41_18	1802625	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.985345	40.5	-	MEVI01	5	1034	978	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315231	GCA_001772695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/695/GCA_001772695.1_ASM177269v1	27774985	-
candidate division WWE3 bacterium RIFCSPLOWO2_01_FULL_41_9	1802626	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.840958	40.9	-	MEVJ01	53	972	759	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315129	GCA_001772705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/705/GCA_001772705.1_ASM177270v1	27774985	-
candidate division WWE3 bacterium RIFCSPLOWO2_01_FULL_42_11	1802627	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.597447	41.3	-	MEVK01	44	666	486	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315223	GCA_001772715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/715/GCA_001772715.1_ASM177271v1	27774985	-
candidate division WWE3 bacterium RIFOXYA1_FULL_42_9	1802633	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.702114	41.5	-	MEVQ01	42	754	650	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314333	GCA_001772745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/745/GCA_001772745.1_ASM177274v1	27774985	-
candidate division WWE3 bacterium RIFOXYA12_FULL_43_11	1802634	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.734832	42.5	-	MEVR01	62	814	655	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314395	GCA_001772775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/775/GCA_001772775.1_ASM177277v1	27774985	-
candidate division WWE3 bacterium RIFOXYA2_FULL_43_12	1802635	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.81504	42.6	-	MEVS01	31	876	780	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314366	GCA_001772795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/795/GCA_001772795.1_ASM177279v1	27774985	-
candidate division WWE3 bacterium RIFCSPHIGHO2_01_FULL_38_45	1802615	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.862028	36.9	-	MEUY01	32	929	853	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314946	GCA_001772815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/815/GCA_001772815.1_ASM177281v1	27774985	-
candidate division WWE3 bacterium RBG_19FT_COMBO_53_11	1802613	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.659365	51.4	-	MEUW01	24	790	628	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313675	GCA_001772805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/805/GCA_001772805.1_ASM177280v1	27774985	-
candidate division WWE3 bacterium RIFCSPHIGHO2_01_FULL_43_9	1802618	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.621078	43.7	-	MEVB01	50	691	527	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314862	GCA_001772855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/855/GCA_001772855.1_ASM177285v1	27774985	-
candidate division WWE3 bacterium RIFCSPHIGHO2_02_FULL_38_14	1802620	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.9411	36.7	-	MEVD01	23	1004	913	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315544	GCA_001772865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/865/GCA_001772865.1_ASM177286v1	27774985	-
candidate division WWE3 bacterium RIFCSPHIGHO2_12_FULL_38_15	1802621	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.963567	36.9	-	MEVE01	22	1009	947	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315659	GCA_001772885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/885/GCA_001772885.1_ASM177288v1	27774985	-
candidate division WWE3 bacterium RIFCSPLOWO2_01_FULL_37_15	1802622	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.509101	37	-	MEVF01	56	561	474	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315222	GCA_001772895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/895/GCA_001772895.1_ASM177289v1	27774985	-
candidate division WWE3 bacterium RIFCSPLOWO2_01_FULL_37_24	1802623	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.94487	36.9	-	MEVG01	28	1013	940	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315317	GCA_001772935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/935/GCA_001772935.1_ASM177293v1	27774985	-
candidate division WWE3 bacterium RIFCSPLOWO2_01_FULL_53_14	1802628	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.532308	52.7	-	MEVL01	40	643	498	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315043	GCA_001772955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/955/GCA_001772955.1_ASM177295v1	27774985	-
candidate division WWE3 bacterium RIFCSPLOWO2_02_FULL_53_10	1802629	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.651739	51.9	-	MEVM01	199	804	509	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316121	GCA_001772965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/965/GCA_001772965.1_ASM177296v1	27774985	-
candidate division WWE3 bacterium RIFCSPLOWO2_12_FULL_36_10	1802630	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.72968	35.4	-	MEVN01	47	848	748	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315914	GCA_001772985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/772/985/GCA_001772985.1_ASM177298v1	27774985	-
candidate division WWE3 bacterium RIFOXYA1_FULL_40_11	1802631	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.897158	40.4	-	MEVO01	1	980	929	10/18/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04316226	GCA_001773015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/015/GCA_001773015.1_ASM177301v1	27774985	-
candidate division WWE3 bacterium RIFOXYA1_FULL_41_11	1802632	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.693166	41.6	-	MEVP01	51	736	634	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314321	GCA_001773035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/035/GCA_001773035.1_ASM177303v1	27774985	-
candidate division WWE3 bacterium RIFOXYA2_FULL_46_9	1802636	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.953042	41.2	-	MEVT01	22	1076	972	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314385	GCA_001773055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/055/GCA_001773055.1_ASM177305v1	27774985	-
candidate division WWE3 bacterium RIFOXYB1_FULL_40_22	1802637	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.897158	40.4	-	MEVU01	1	980	929	10/18/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04316247	GCA_001773065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/065/GCA_001773065.1_ASM177306v1	27774985	-
candidate division WWE3 bacterium RIFOXYB1_FULL_42_27	1802638	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.77798	41.6	-	MEVV01	25	810	751	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314520	GCA_001773095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/095/GCA_001773095.1_ASM177309v1	27774985	-
candidate division WWE3 bacterium RIFOXYB1_FULL_43_12	1802639	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.728928	42.7	-	MEVW01	47	800	671	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314485	GCA_001773115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/115/GCA_001773115.1_ASM177311v1	27774985	-
candidate division WWE3 bacterium RIFOXYB2_FULL_41_6	1802641	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.918752	40.2	-	MEVY01	18	1020	930	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314447	GCA_001773145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/145/GCA_001773145.1_ASM177314v1	27774985	-
candidate division WWE3 bacterium RIFOXYB1_FULL_43_24	1802640	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.777638	41.6	-	MEVX01	19	833	779	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314501	GCA_001773135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/135/GCA_001773135.1_ASM177313v1	27774985	-
candidate division WWE3 bacterium RIFOXYB2_FULL_43_9	1802642	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.767997	42.6	-	MEVZ01	43	831	684	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314458	GCA_001773175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/175/GCA_001773175.1_ASM177317v1	27774985	-
candidate division WWE3 bacterium RIFOXYC1_FULL_39_7	1802643	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.0186	39.4	-	MEWA01	52	1114	959	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314536	GCA_001773195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/195/GCA_001773195.1_ASM177319v1	27774985	-
candidate division WWE3 bacterium RIFOXYC1_FULL_40_10	1802644	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.897158	40.4	-	MEWB01	1	980	929	10/18/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04316223	GCA_001773215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/215/GCA_001773215.1_ASM177321v1	27774985	-
candidate division WWE3 bacterium RIFOXYC2_FULL_40_11	1802647	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.903911	40.2	-	MEWE01	10	1003	898	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314571	GCA_001773225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/225/GCA_001773225.1_ASM177322v1	27774985	-
candidate division WWE3 bacterium RIFOXYC2_FULL_42_13	1802648	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.78009	42.8	-	MEWF01	27	852	721	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314594	GCA_001773255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/255/GCA_001773255.1_ASM177325v1	27774985	-
candidate division WWE3 bacterium RIFOXYD1_FULL_42_24	1802651	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.703437	41.5	-	MEWI01	13	741	689	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314731	GCA_001773275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/275/GCA_001773275.1_ASM177327v1	27774985	-
candidate division WWE3 bacterium RIFOXYD1_FULL_39_9	1802649	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.08888	38.9	-	MEWG01	50	1211	1024	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314772	GCA_001773295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/295/GCA_001773295.1_ASM177329v1	27774985	-
candidate division WWE3 bacterium RIFOXYC1_FULL_42_13	1802645	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.806253	41.6	-	MEWC01	27	850	786	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314535	GCA_001773305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/305/GCA_001773305.1_ASM177330v1	27774985	-
candidate division WWE3 bacterium RIFOXYC1_FULL_42_17	1802646	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.778421	41.6	-	MEWD01	25	815	755	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314546	GCA_001773315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/315/GCA_001773315.1_ASM177331v1	27774985	-
candidate division WWE3 bacterium RIFOXYD1_FULL_40_11	1802650	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.892209	40.2	-	MEWH01	9	982	888	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314755	GCA_001773375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/375/GCA_001773375.1_ASM177337v1	27774985	-
candidate division WWE3 bacterium RIFOXYD1_FULL_43_17	1802652	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.863201	42.4	-	MEWJ01	59	896	793	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316189	GCA_001773385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/385/GCA_001773385.1_ASM177338v1	27774985	-
candidate division WWE3 bacterium RIFOXYD2_FULL_43_10	1802653	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.783117	42.3	-	MEWK01	32	881	696	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314700	GCA_001773395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/395/GCA_001773395.1_ASM177339v1	27774985	-
candidate division Zixibacteria bacterium RBG_16_40_9	1802783	PRJNA288027	288027	FCB group	candidate division Zixibacteria	1.43922	39.3	-	MEWL01	126	1447	985	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314266	GCA_001773425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/425/GCA_001773425.1_ASM177342v1	27774985	-
Candidatus Abawacabacteria bacterium RBG_16_42_10	1817814	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.0956	41.1	-	MEWR01	28	1086	951	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313702	GCA_001773455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/455/GCA_001773455.1_ASM177345v1	27774985	-
candidate division Zixibacteria bacterium RBG_16_50_21	1802786	PRJNA288027	288027	FCB group	candidate division Zixibacteria	1.37987	49.8	-	MEWO01	64	1301	1199	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314048	GCA_001773465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/465/GCA_001773465.1_ASM177346v1	27774985	-
Candidatus Abawacabacteria bacterium RIFCSPHIGHO2_01_FULL_46_8	1817815	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.50992	45.6	-	MEWS01	52	552	391	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314941	GCA_001773485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/485/GCA_001773485.1_ASM177348v1	27774985	-
Candidatus Adlerbacteria bacterium RIFCSPHIGHO2_02_FULL_52_17	1797240	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.454632	51.6	-	MEWU01	36	535	447	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315521	GCA_001773505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/505/GCA_001773505.1_ASM177350v1	27774985	-
Candidatus Adlerbacteria bacterium RIFCSPLOWO2_01_FULL_54_16	1797244	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.586632	53.9	-	MEWY01	12	673	593	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315286	GCA_001773535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/535/GCA_001773535.1_ASM177353v1	27774985	-
Candidatus Adlerbacteria bacterium RIFCSPLOWO2_01_FULL_54_21b	1797245	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.569343	53.9	-	MEWZ01	34	660	580	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315102	GCA_001773545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/545/GCA_001773545.1_ASM177354v1	27774985	-
Candidatus Adlerbacteria bacterium RIFOXYC1_FULL_48_26	1797247	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.630352	47.8	-	MEXB01	17	727	671	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314540	GCA_001773575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/575/GCA_001773575.1_ASM177357v1	27774985	-
Candidatus Amesbacteria bacterium RBG_16_48_31	1797249	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.686074	48.2	-	MEXD01	56	796	712	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313737	GCA_001773585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/585/GCA_001773585.1_ASM177358v1	27774985	-
Candidatus Amesbacteria bacterium RIFCSPHIGHO2_01_FULL_48_32	1797252	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.954878	47.5	-	MEXG01	16	1115	1047	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314787	GCA_001773615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/615/GCA_001773615.1_ASM177361v1	27774985	-
Candidatus Amesbacteria bacterium RIFCSPHIGHO2_01_FULL_48_75	1797254	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.662098	48.2	-	MEXI01	63	780	686	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314855	GCA_001773625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/625/GCA_001773625.1_ASM177362v1	27774985	-
Candidatus Amesbacteria bacterium RIFCSPLOWO2_01_FULL_47_33	1797258	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.916351	47.4	-	MEXM01	57	1052	972	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315125	GCA_001773655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/655/GCA_001773655.1_ASM177365v1	27774985	-
Candidatus Amesbacteria bacterium RIFCSPHIGHO2_12_FULL_48_14	1797257	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.960932	47.5	-	MEXL01	57	1105	974	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315570	GCA_001773645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/645/GCA_001773645.1_ASM177364v1	27774985	-
Candidatus Amesbacteria bacterium RIFCSPLOWO2_01_FULL_48_25	1797259	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.938849	47.4	-	MEXN01	10	1109	1050	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315142	GCA_001773695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/695/GCA_001773695.1_ASM177369v1	27774985	-
Candidatus Amesbacteria bacterium RIFCSPLOWO2_01_FULL_48_50	1797260	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.776953	48.1	-	MEXO01	58	894	804	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315311	GCA_001773715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/715/GCA_001773715.1_ASM177371v1	27774985	-
Candidatus Amesbacteria bacterium RIFCSPLOWO2_01_FULL_49_25	1797261	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.958218	47.8	-	MEXP01	30	1069	991	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315052	GCA_001773725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/725/GCA_001773725.1_ASM177372v1	27774985	-
Candidatus Amesbacteria bacterium RIFCSPLOWO2_02_FULL_48_11	1797262	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.95232	47.4	-	MEXQ01	57	1143	960	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315977	GCA_001773735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/735/GCA_001773735.1_ASM177373v1	27774985	-
Candidatus Amesbacteria bacterium RIFOXYB1_FULL_44_23	1797263	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.11496	43.7	-	MEXR01	62	1267	1157	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314518	GCA_001773775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/775/GCA_001773775.1_ASM177377v1	27774985	-
Candidatus Amesbacteria bacterium RIFOXYB1_FULL_47_13	1797265	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.992167	46.7	-	MEXT01	23	1126	1009	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314500	GCA_001773795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/795/GCA_001773795.1_ASM177379v1	27774985	-
Candidatus Amesbacteria bacterium RIFOXYD1_FULL_47_9	1797267	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.840594	46.4	-	MEXV01	68	1032	725	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314729	GCA_001773815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/815/GCA_001773815.1_ASM177381v1	27774985	-
Candidatus Aminicenantes bacterium RBG_13_63_10	1797270	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	3.32518	61.1	-	MEXY01	214	3260	2053	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313977	GCA_001773825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/825/GCA_001773825.1_ASM177382v1	27774985	-
Candidatus Aminicenantes bacterium RBG_13_64_14	1797271	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.79276	61.3	-	MEXZ01	161	1761	1184	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313991	GCA_001773855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/855/GCA_001773855.1_ASM177385v1	27774985	-
Candidatus Aminicenantes bacterium RBG_16_63_14	1797272	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	2.38842	62.7	-	MEYA01	153	2256	1656	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313697	GCA_001773875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/875/GCA_001773875.1_ASM177387v1	27774985	-
Candidatus Aminicenantes bacterium RBG_16_63_16	1797273	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	4.52682	62.1	-	MEYB01	130	3734	3325	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313724	GCA_001773895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/895/GCA_001773895.1_ASM177389v1	27774985	-
Candidatus Aminicenantes bacterium RBG_19FT_COMBO_58_17	1797275	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	3.57397	56.8	-	MEYD01	292	3303	2360	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313666	GCA_001773915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/915/GCA_001773915.1_ASM177391v1	27774985	-
Candidatus Aminicenantes bacterium RBG_19FT_COMBO_59_29	1797276	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.977955	58.2	-	MEYE01	112	948	767	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314149	GCA_001773925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/925/GCA_001773925.1_ASM177392v1	27774985	-
Candidatus Atribacteria bacterium RBG_19FT_COMBO_35_14	1797291	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.95411	35.2	-	MEYH01	113	1858	1654	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313668	GCA_001773955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/955/GCA_001773955.1_ASM177395v1	27774985	-
Candidatus Azambacteria bacterium RBG_16_47_10	1797292	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.67604	46.7	-	MEYI01	49	778	567	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314031	GCA_001773975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/975/GCA_001773975.1_ASM177397v1	27774985	-
Candidatus Azambacteria bacterium RIFCSPHIGHO2_01_46_10	1797293	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.619064	46.2	-	MEYJ01	54	679	563	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313760	GCA_001773995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/995/GCA_001773995.1_ASM177399v1	27774985	-
Candidatus Azambacteria bacterium RIFCSPHIGHO2_01_FULL_44_55	1797302	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.654207	44.3	-	MEYL01	41	705	632	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314986	GCA_001774005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/005/GCA_001774005.1_ASM177400v1	27774985	-
Candidatus Azambacteria bacterium RIFCSPHIGHO2_01_FULL_51_74	1797294	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.908945	51.4	-	MEYM01	44	996	909	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315003	GCA_001774035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/035/GCA_001774035.1_ASM177403v1	27774985	-
Candidatus Azambacteria bacterium RIFCSPHIGHO2_02_FULL_45_18	1797303	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.682654	44.4	-	MEYO01	20	728	659	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315431	GCA_001774055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/055/GCA_001774055.1_ASM177405v1	27774985	-
Candidatus Azambacteria bacterium RIFCSPLOWO2_01_FULL_44_84	1797304	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.596916	44.3	-	MEYR01	41	647	569	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315171	GCA_001774075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/075/GCA_001774075.1_ASM177407v1	27774985	-
Candidatus Azambacteria bacterium RIFCSPLOWO2_01_FULL_46_25	1797298	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.944023	51.4	-	MEYS01	4	1006	948	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315141	GCA_001774085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/085/GCA_001774085.1_ASM177408v1	27774985	-
Candidatus Azambacteria bacterium RIFCSPLOWO2_01_FULL_46_26	1797299	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.727129	46.2	-	MEYT01	50	761	673	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315178	GCA_001774105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/105/GCA_001774105.1_ASM177410v1	27774985	-
Candidatus Azambacteria bacterium RIFCSPLOWO2_02_FULL_44_14	1797306	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.773874	44.2	-	MEYV01	22	828	721	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316018	GCA_001774135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/135/GCA_001774135.1_ASM177413v1	27774985	-
Candidatus Azambacteria bacterium RIFCSPLOWO2_02_FULL_46_11	1797300	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.702476	45.3	-	MEYW01	46	759	558	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316090	GCA_001774155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/155/GCA_001774155.1_ASM177415v1	27774985	-
Candidatus Azambacteria bacterium RIFOXYC1_FULL_41_20	1797309	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.585024	42.3	-	MEYZ01	1	654	604	10/18/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04316222	GCA_001774165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/165/GCA_001774165.1_ASM177416v1	27774985	-
Candidatus Azambacteria bacterium RIFOXYD1_FULL_42_11	1797310	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.546161	40.8	-	MEZA01	37	658	521	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314720	GCA_001774195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/195/GCA_001774195.1_ASM177419v1	27774985	-
Candidatus Azambacteria bacterium RIFOXYD1_FULL_42_38	1797311	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.585024	42.3	-	MEZB01	1	654	604	10/18/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04316224	GCA_001774215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/215/GCA_001774215.1_ASM177421v1	27774985	-
Candidatus Bathyarchaeota archaeon RBG_13_46_16b	1797378	PRJNA288027	288027	TACK group	Candidatus Bathyarchaeota	1.36938	45.2	-	MEZE01	92	1521	1317	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316268	GCA_001774235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/235/GCA_001774235.1_ASM177423v1	27774985	-
Candidatus Bathyarchaeota archaeon RBG_13_52_12	1797379	PRJNA288027	288027	TACK group	Candidatus Bathyarchaeota	2.08168	50.5	-	MEZF01	111	2272	1779	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316267	GCA_001774245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/245/GCA_001774245.1_ASM177424v1	27774985	-
Candidatus Beckwithbacteria bacterium RIFCSPHIGHO2_01_FULL_49_39	1797458	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.03015	48.9	-	MEZL01	12	1141	1078	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315030	GCA_001774275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/275/GCA_001774275.1_ASM177427v1	27774985	-
Candidatus Beckwithbacteria bacterium RIFCSPHIGHO2_12_FULL_49_13	1797461	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.03158	48.9	-	MEZO01	8	1154	1068	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316245	GCA_001774295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/295/GCA_001774295.1_ASM177429v1	27774985	-
Candidatus Beckwithbacteria bacterium RIFCSPLOWO2_01_FULL_49_47	1797462	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.992556	49	-	MEZP01	7	1090	1035	10/18/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04315312	GCA_001774315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/315/GCA_001774315.1_ASM177431v1	27774985	-
Candidatus Beckwithbacteria bacterium RIFCSPLOWO2_02_FULL_49_12	1797464	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.05972	48.8	-	MEZR01	23	1197	1053	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316110	GCA_001774335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/335/GCA_001774335.1_ASM177433v1	27774985	-
Candidatus Beckwithbacteria bacterium RIFOXYD1_FULL_50_11	1797465	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.00292	48.8	-	MEZS01	36	1140	984	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314737	GCA_001774345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/345/GCA_001774345.1_ASM177434v1	27774985	-
Candidatus Berkelbacteria bacterium RBG_13_40_8	1797467	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.839957	38.3	-	MEZT01	33	959	650	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313692	GCA_001774375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/375/GCA_001774375.1_ASM177437v1	27774985	-
Candidatus Berkelbacteria bacterium RIFCSPLOWO2_01_FULL_50_28	1797471	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.850026	49.8	-	MEZX01	3	863	810	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315224	GCA_001774395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/395/GCA_001774395.1_ASM177439v1	27774985	-
Candidatus Campbellbacteria bacterium RIFCSPHIGHO2_01_FULL_34_10	1797577	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.566359	33.9	-	MEZZ01	44	635	549	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314964	GCA_001774415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/415/GCA_001774415.1_ASM177441v1	27774985	-
Candidatus Campbellbacteria bacterium RIFCSPLOWO2_01_FULL_34_15	1797579	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.667996	34.1	-	MFAB01	33	732	683	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315149	GCA_001774425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/425/GCA_001774425.1_ASM177442v1	27774985	-
Candidatus Campbellbacteria bacterium RIFCSPLOWO2_02_35_12	1797580	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.357328	35	-	MFAC01	37	363	318	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314082	GCA_001774455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/455/GCA_001774455.1_ASM177445v1	27774985	-
Candidatus Campbellbacteria bacterium RIFCSPLOWO2_02_FULL_35_11	1797581	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.523537	35	-	MFAD01	42	581	501	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316006	GCA_001774475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/475/GCA_001774475.1_ASM177447v1	27774985	-
Candidatus Campbellbacteria bacterium RIFOXYC2_FULL_35_25	1797582	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.782376	34.9	-	MFAE01	15	847	790	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314563	GCA_001774495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/495/GCA_001774495.1_ASM177449v1	27774985	-
Candidatus Coatesbacteria bacterium RBG_13_66_14	1817816	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	2.06509	64.5	-	MFAF01	152	1919	1429	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313985	GCA_001774505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/505/GCA_001774505.1_ASM177450v1	27774985	-
Candidatus Collierbacteria bacterium RIFCSPHIGHO2_01_FULL_50_25	1817722	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.729379	49.6	-	MFAG01	41	837	759	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314856	GCA_001774535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/535/GCA_001774535.1_ASM177453v1	27774985	-
Candidatus Collierbacteria bacterium RIFCSPLOWO2_01_FULL_50_23	1817724	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.750015	49.8	-	MFAI01	37	852	776	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315237	GCA_001774555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/555/GCA_001774555.1_ASM177455v1	27774985	-
Candidatus Collierbacteria bacterium RIFOXYA1_FULL_46_24	1817725	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.590316	46.5	-	MFAJ01	42	643	562	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314308	GCA_001774575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/575/GCA_001774575.1_ASM177457v1	27774985	-
Candidatus Collierbacteria bacterium RIFOXYA2_FULL_46_10	1817726	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.72222	46	-	MFAK01	44	815	688	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314349	GCA_001774585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/585/GCA_001774585.1_ASM177458v1	27774985	-
Candidatus Collierbacteria bacterium RIFOXYB1_FULL_49_13	1817728	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.819155	48.4	-	MFAM01	73	972	778	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314489	GCA_001774615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/615/GCA_001774615.1_ASM177461v1	27774985	-
Candidatus Collierbacteria bacterium RIFOXYB2_FULL_46_14	1817729	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.08943	45	-	MFAN01	1	1211	1165	10/18/16	10/19/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04316218	GCA_001774635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/635/GCA_001774635.1_ASM177463v1	27774985	-
Pseudomonadales bacterium GWC2_63_15	1817754	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.08918	45	-	MFAO01	2	1215	1165	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314441	GCA_001774655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/774/655/GCA_001774655.1_ASM177465v1	27774985	-
Desulfobacterales bacterium GWB2_56_26	1797913	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	4.50973	55.3	-	MGTI01	263	4110	3668	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313902	GCA_001799365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/365/GCA_001799365.1_ASM179936v1	27774985	-
Desulfobacterales bacterium RIFOXYA12_FULL_46_15	1797914	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	4.73857	45.3	-	MGTJ01	250	4355	4033	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314398	GCA_001799395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/395/GCA_001799395.1_ASM179939v1	27774985	-
Desulfovibrionales bacterium GWA2_65_9	1797915	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	3.05194	64.5	-	MGTN01	181	2853	2279	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314172	GCA_001799475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/475/GCA_001799475.1_ASM179947v1	27774985	-
Desulfuromonadales bacterium GWC2_61_20	1797916	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.78097	61.6	-	MGTO01	163	2637	2427	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314126	GCA_001799485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/485/GCA_001799485.1_ASM179948v1	27774985	-
Desulfuromonadales bacterium GWD2_54_10	1797917	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.69771	51.6	-	MGTP01	243	2632	1869	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313904	GCA_001799505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/505/GCA_001799505.1_ASM179950v1	27774985	-
Desulfuromonadales bacterium GWD2_61_12	1797918	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.85094	60.9	-	MGTQ01	171	2763	2393	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314212	GCA_001799535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/535/GCA_001799535.1_ASM179953v1	27774985	-
Elusimicrobia bacterium GWA2_51_34	1797921	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.63131	51.3	-	MGTS01	43	2318	2245	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313854	GCA_001799565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/565/GCA_001799565.1_ASM179956v1	27774985	-
Elusimicrobia bacterium GWA2_38_7	1797920	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	1.84306	37.7	-	MGTR01	143	1606	1213	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314155	GCA_001799555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/555/GCA_001799555.1_ASM179955v1	27774985	-
Elusimicrobia bacterium GWA2_56_46	1797922	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.66409	56.4	-	MGTT01	30	2306	2250	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313849	GCA_001799575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/575/GCA_001799575.1_ASM179957v1	27774985	-
Elusimicrobia bacterium GWA2_61_42	1797923	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.94555	61.4	-	MGTU01	34	2657	2562	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313856	GCA_001799615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/615/GCA_001799615.1_ASM179961v1	27774985	-
Elusimicrobia bacterium GWA2_62_23	1797924	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.98292	62.4	-	MGTV01	51	2640	2553	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314170	GCA_001799635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/635/GCA_001799635.1_ASM179963v1	27774985	-
Elusimicrobia bacterium GWA2_64_40	1797925	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.74499	64.2	-	MGTW01	78	2530	2404	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313850	GCA_001799645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/645/GCA_001799645.1_ASM179964v1	27774985	-
Elusimicrobia bacterium GWA2_66_18	1797926	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.79251	65.4	-	MGTX01	34	2515	2422	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313858	GCA_001799675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/675/GCA_001799675.1_ASM179967v1	27774985	-
Elusimicrobia bacterium GWA2_69_24	1797927	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	4.20046	68.5	-	MGTY01	132	3517	3332	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313857	GCA_001799695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/695/GCA_001799695.1_ASM179969v1	27774985	-
Elusimicrobia bacterium GWB2_63_16	1797928	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.867	63.6	-	MGTZ01	62	2607	2418	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313851	GCA_001799715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/715/GCA_001799715.1_ASM179971v1	27774985	-
Elusimicrobia bacterium GWB2_63_22	1797929	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	3.06273	62.5	-	MGUA01	45	2769	2659	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313852	GCA_001799735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/735/GCA_001799735.1_ASM179973v1	27774985	-
Elusimicrobia bacterium GWC2_51_8	1797930	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.30632	50.8	-	MGUB01	167	2184	1781	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313855	GCA_001799745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/745/GCA_001799745.1_ASM179974v1	27774985	-
Elusimicrobia bacterium GWC2_56_31	1797931	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.69628	56.4	-	MGUC01	35	2337	2275	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313860	GCA_001799775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/775/GCA_001799775.1_ASM179977v1	27774985	-
Elusimicrobia bacterium GWC2_61_19	1797932	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	1.35952	60.7	-	MGUD01	29	1307	1250	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314202	GCA_001799795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/795/GCA_001799795.1_ASM179979v1	27774985	-
Elusimicrobia bacterium GWC2_61_25	1797933	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.84239	61.6	-	MGUE01	53	2590	2473	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313859	GCA_001799815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/815/GCA_001799815.1_ASM179981v1	27774985	-
Elusimicrobia bacterium GWC2_63_65	1797934	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	1.62832	63.4	-	MGUF01	120	1554	1415	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314300	GCA_001799825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/825/GCA_001799825.1_ASM179982v1	27774985	-
Elusimicrobia bacterium GWC2_64_44	1797935	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	3.08968	64.4	-	MGUG01	60	2760	2633	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313853	GCA_001799845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/845/GCA_001799845.1_ASM179984v1	27774985	-
Elusimicrobia bacterium GWC2_65_9	1797936	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.61294	65	-	MGUH01	139	2518	2032	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313861	GCA_001799875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/875/GCA_001799875.1_ASM179987v1	27774985	-
Elusimicrobia bacterium GWD2_63_28	1797937	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	3.29299	62.9	-	MGUI01	74	2949	2819	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314210	GCA_001799895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/895/GCA_001799895.1_ASM179989v1	27774985	-
Elusimicrobia bacterium GWF2_52_66	1797938	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.3008	51.5	-	MGUJ01	159	2025	1902	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314142	GCA_001799915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/915/GCA_001799915.1_ASM179991v1	27774985	-
Elusimicrobia bacterium RIFCSPHIGHO2_01_FULL_64_10	1797941	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	1.52828	63.5	-	MGUM01	103	1456	1145	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314789	GCA_001799925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/925/GCA_001799925.1_ASM179992v1	27774985	-
Elusimicrobia bacterium RIFCSPHIGHO2_02_FULL_39_36	1797942	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.50474	38.3	-	MGUN01	25	1877	1802	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315333	GCA_001799945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/945/GCA_001799945.1_ASM179994v1	27774985	-
Elusimicrobia bacterium RIFCSPLOWO2_01_FULL_54_10	1797945	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	1.89077	53.9	-	MGUQ01	129	1958	1553	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315054	GCA_001799975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/975/GCA_001799975.1_ASM179997v1	27774985	-
Elusimicrobia bacterium GWF2_62_30	1797939	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.91047	61.7	-	MGUK01	99	2590	2454	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314137	GCA_001799995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/995/GCA_001799995.1_ASM179999v1	27774985	-
Elusimicrobia bacterium RBG_16_66_12	1797940	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	3.55627	65.8	-	MGUL01	204	3634	2772	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313709	GCA_001800005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/005/GCA_001800005.1_ASM180000v1	27774985	-
Elusimicrobia bacterium RIFCSPHIGHO2_02_FULL_57_9	1797943	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.22939	57.1	-	MGUO01	318	2263	1777	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316162	GCA_001800015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/015/GCA_001800015.1_ASM180001v1	27774985	-
Elusimicrobia bacterium RIFCSPHIGHO2_02_FULL_61_10	1797944	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.62438	58.3	-	MGUP01	1021	2541	1401	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316158	GCA_001800025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/025/GCA_001800025.1_ASM180002v1	27774985	-
Elusimicrobia bacterium RIFCSPLOWO2_01_FULL_59_12	1797946	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.21148	58.9	-	MGUR01	77	2123	1809	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315145	GCA_001800075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/075/GCA_001800075.1_ASM180007v1	27774985	-
Elusimicrobia bacterium RIFCSPLOWO2_01_FULL_64_13	1797948	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	1.65072	63.4	-	MGUT01	80	1564	1265	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315055	GCA_001800095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/095/GCA_001800095.1_ASM180009v1	27774985	-
Elusimicrobia bacterium RIFCSPLOWO2_01_FULL_60_11	1797947	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	1.71848	59.1	-	MGUS01	137	1719	1247	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315239	GCA_001800085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/085/GCA_001800085.1_ASM180008v1	27774985	-
Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_39_32	1797949	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.52459	38.3	-	MGUU01	27	1880	1805	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315999	GCA_001800135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/135/GCA_001800135.1_ASM180013v1	27774985	-
Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_61_11	1797950	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	1.75073	59.1	-	MGUV01	182	1770	1079	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316064	GCA_001800155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/155/GCA_001800155.1_ASM180015v1	27774985	-
Elusimicrobia bacterium RIFCSPLOWO2_12_FULL_39_28	1797951	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.51811	38.3	-	MGUW01	28	1869	1797	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315873	GCA_001800165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/165/GCA_001800165.1_ASM180016v1	27774985	-
Elusimicrobia bacterium RIFOXYA1_FULL_47_7	1797953	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	1.73018	46.8	-	MGUY01	158	1672	1297	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314325	GCA_001800205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/205/GCA_001800205.1_ASM180020v1	27774985	-
Elusimicrobia bacterium RIFCSPLOWO2_12_FULL_59_9	1797952	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	1.96406	58.8	-	MGUX01	171	1833	1627	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315829	GCA_001800185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/185/GCA_001800185.1_ASM180018v1	27774985	-
Elusimicrobia bacterium RIFOXYA12_FULL_49_49	1797954	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.28179	47.9	-	MGUZ01	22	1904	1836	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314399	GCA_001800235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/235/GCA_001800235.1_ASM180023v1	27774985	-
Elusimicrobia bacterium RIFOXYA12_FULL_51_18	1797955	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.75157	52.7	-	MGVA01	69	2396	2310	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314391	GCA_001800245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/245/GCA_001800245.1_ASM180024v1	27774985	-
Elusimicrobia bacterium RIFOXYA12_FULL_57_11	1797956	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.302	57.2	-	MGVB01	176	2189	1899	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314406	GCA_001800275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/275/GCA_001800275.1_ASM180027v1	27774985	-
Elusimicrobia bacterium RIFOXYA2_FULL_39_19	1797957	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	3.0911	38.5	-	MGVC01	86	2552	2460	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314373	GCA_001800285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/285/GCA_001800285.1_ASM180028v1	27774985	-
Elusimicrobia bacterium RIFOXYA2_FULL_47_53	1797959	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.41353	47.8	-	MGVE01	20	2013	1949	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314372	GCA_001800315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/315/GCA_001800315.1_ASM180031v1	27774985	-
Elusimicrobia bacterium RIFOXYA2_FULL_40_6	1797958	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	1.92937	40.1	-	MGVD01	194	1858	1394	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316171	GCA_001800325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/325/GCA_001800325.1_ASM180032v1	27774985	-
Elusimicrobia bacterium RIFOXYA2_FULL_50_26	1797960	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.01169	50.5	-	MGVF01	138	1764	1611	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314340	GCA_001800355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/355/GCA_001800355.1_ASM180035v1	27774985	-
Elusimicrobia bacterium RIFOXYA2_FULL_53_38	1797961	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	3.09175	52.8	-	MGVG01	55	2647	2562	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314339	GCA_001800375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/375/GCA_001800375.1_ASM180037v1	27774985	-
Elusimicrobia bacterium RIFOXYA2_FULL_58_8	1797962	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.44971	57	-	MGVH01	152	2337	1907	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314355	GCA_001800395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/395/GCA_001800395.1_ASM180039v1	27774985	-
Elusimicrobia bacterium RIFOXYB1_FULL_48_9	1797964	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	1.84177	47.3	-	MGVJ01	133	1753	1355	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314507	GCA_001800425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/425/GCA_001800425.1_ASM180042v1	27774985	-
Elusimicrobia bacterium RIFOXYA2_FULL_69_6	1797963	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	1.44435	65	-	MGVI01	840	1065	535	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316170	GCA_001800405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/405/GCA_001800405.1_ASM180040v1	27774985	-
Elusimicrobia bacterium RIFOXYB12_FULL_50_12	1797965	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	1.94695	48.4	-	MGVK01	30	1657	1570	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314460	GCA_001800455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/455/GCA_001800455.1_ASM180045v1	27774985	-
Elusimicrobia bacterium RIFOXYB2_FULL_46_23	1797966	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.39845	47.8	-	MGVL01	26	2005	1933	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314444	GCA_001800475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/475/GCA_001800475.1_ASM180047v1	27774985	-
Elusimicrobia bacterium RIFOXYB2_FULL_48_7	1797967	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.1987	47.3	-	MGVM01	223	2072	1594	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314418	GCA_001800495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/495/GCA_001800495.1_ASM180049v1	27774985	-
Elusimicrobia bacterium RIFOXYB2_FULL_49_7	1797968	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	3.673	48.5	-	MGVN01	254	3422	2842	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314414	GCA_001800515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/515/GCA_001800515.1_ASM180051v1	27774985	-
Elusimicrobia bacterium RIFOXYB2_FULL_50_12	1797969	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.16204	49.8	-	MGVO01	123	1927	1699	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314435	GCA_001800525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/525/GCA_001800525.1_ASM180052v1	27774985	-
Elusimicrobia bacterium RIFOXYB2_FULL_62_6	1797970	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.77	60.7	-	MGVP01	922	2443	1573	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316167	GCA_001800555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/555/GCA_001800555.1_ASM180055v1	27774985	-
Elusimicrobia bacterium RIFOXYC2_FULL_34_12	1797971	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	1.89691	33.3	-	MGVQ01	114	1772	1543	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314595	GCA_001800565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/565/GCA_001800565.1_ASM180056v1	27774985	-
Elusimicrobia bacterium RIFOXYD2_FULL_34_15	1797973	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.46525	34	-	MGVS01	119	2138	1994	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314660	GCA_001800605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/605/GCA_001800605.1_ASM180060v1	27774985	-
Elusimicrobia bacterium RIFOXYD12_FULL_66_9	1797972	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	2.50513	65.6	-	MGVR01	577	2560	1607	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314627	GCA_001800595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/595/GCA_001800595.1_ASM180059v1	27774985	-
Elusimicrobia bacterium RIFOXYD2_FULL_34_30	1797974	PRJNA288027	288027	Elusimicrobia	unclassified Elusimicrobia	1.79892	33.4	-	MGVT01	130	1653	1521	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314704	GCA_001800635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/635/GCA_001800635.1_ASM180063v1	27774985	-
Euryarchaeota archaeon RBG_13_31_8	1797976	PRJNA288027	288027	Euryarchaeota	unclassified Euryarchaeota	1.56252	29.3	-	MGVV01	146	1710	954	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316266	GCA_001800665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/665/GCA_001800665.1_ASM180066v1	27774985	-
Euryarchaeota archaeon RBG_13_57_23	1797977	PRJNA288027	288027	Euryarchaeota	unclassified Euryarchaeota	1.52081	56.9	-	MGVW01	66	1481	1364	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316265	GCA_001800675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/675/GCA_001800675.1_ASM180067v1	27774985	-
Euryarchaeota archaeon RBG_13_61_15	1797978	PRJNA288027	288027	Euryarchaeota	unclassified Euryarchaeota	1.16481	56.7	-	MGVX01	129	1303	731	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316264	GCA_001800715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/715/GCA_001800715.1_ASM180071v1	27774985	-
Euryarchaeota archaeon RBG_16_62_10	1797979	PRJNA288027	288027	Euryarchaeota	unclassified Euryarchaeota	1.49491	60.5	-	MGVY01	116	1616	979	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316256	GCA_001800735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/735/GCA_001800735.1_ASM180073v1	27774985	-
Euryarchaeota archaeon RBG_16_68_12	1797981	PRJNA288027	288027	Euryarchaeota	unclassified Euryarchaeota	1.76262	67.4	-	MGWA01	131	1997	1414	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316254	GCA_001800755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/755/GCA_001800755.1_ASM180075v1	27774985	-
Euryarchaeota archaeon RBG_16_67_27	1797980	PRJNA288027	288027	Euryarchaeota	unclassified Euryarchaeota	1.54672	67.8	-	MGVZ01	79	1588	1432	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316255	GCA_001800745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/745/GCA_001800745.1_ASM180074v1	27774985	-
Euryarchaeota archaeon RBG_16_68_13	1797982	PRJNA288027	288027	Euryarchaeota	unclassified Euryarchaeota	1.58882	66.3	-	MGWB01	51	1655	1354	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316257	GCA_001800795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/795/GCA_001800795.1_ASM180079v1	27774985	-
Euryarchaeota archaeon RBG_19FT_COMBO_56_21	1797983	PRJNA288027	288027	Euryarchaeota	unclassified Euryarchaeota	1.86877	56.3	-	MGWC01	65	1790	1672	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316249	GCA_001800815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/815/GCA_001800815.1_ASM180081v1	27774985	-
Euryarchaeota archaeon RBG_19FT_COMBO_69_17	1797984	PRJNA288027	288027	Euryarchaeota	unclassified Euryarchaeota	2.21069	68.7	-	MGWD01	66	2336	1986	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316248	GCA_001800825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/825/GCA_001800825.1_ASM180082v1	27774985	-
Firmicutes bacterium GWE2_51_13	1798010	PRJNA288027	288027	Terrabacteria group	Firmicutes	2.22356	50.3	-	MGWE01	30	2266	2168	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313940	GCA_001800835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/835/GCA_001800835.1_ASM180083v1	27774985	-
Firmicutes bacterium GWF2_51_9	1798011	PRJNA288027	288027	Terrabacteria group	Firmicutes	2.15719	50.2	-	MGWF01	70	2255	1971	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313941	GCA_001800865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/865/GCA_001800865.1_ASM180086v1	27774985	-
Firmicutes bacterium RBG_13_65_8	1798012	PRJNA288027	288027	Terrabacteria group	Firmicutes	0.545915	58.9	-	MGWG01	71	617	256	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314017	GCA_001800895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/895/GCA_001800895.1_ASM180089v1	27774985	-
Flavobacteria bacterium GWA2_35_26	1798013	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	2.09976	35.1	-	MGWH01	6	1937	1888	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313842	GCA_001800905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/905/GCA_001800905.1_ASM180090v1	27774985	-
Flavobacteria bacterium GWF1_32_7	1798014	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	2.63788	32.7	-	MGWI01	26	2477	2374	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313828	GCA_001800925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/925/GCA_001800925.1_ASM180092v1	27774985	-
Flavobacteria bacterium RIFCSPLOWO2_12_FULL_31_7	1798015	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	1.95728	31.3	-	MGWJ01	194	1936	1646	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315883	GCA_001800945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/945/GCA_001800945.1_ASM180094v1	27774985	-
Flavobacteria bacterium RIFCSPLOWO2_12_FULL_35_11	1798016	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.55633	35.1	-	MGWK01	98	3179	3025	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315779	GCA_001800975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/975/GCA_001800975.1_ASM180097v1	27774985	-
Collimonas pratensis	279113	PRJNA299266	299266	Proteobacteria	Betaproteobacteria	5.73003	58.7	chromosome:NZ_CP013234.1/CP013234.1	-	1	5149	4948	3/9/16	4/12/17	Complete Genome	Netherlands Institute of Ecology	SAMN04195677	GCA_001584185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/185/GCA_001584185.1_ASM158418v1	-	Ter91
Gallionellales bacterium GWA2_54_124	1798243	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	2.90428	52.7	-	MGWO01	14	2694	2613	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314108	GCA_001801025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/025/GCA_001801025.1_ASM180102v1	27774985	-
Gallionellales bacterium GWA2_55_18	1798244	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	1.68942	55.1	-	MGWP01	78	1615	1487	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314115	GCA_001801055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/055/GCA_001801055.1_ASM180105v1	27774985	-
Gallionellales bacterium GWA2_59_43	1798245	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	2.2519	59.3	-	MGWQ01	167	2248	2061	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314182	GCA_001801065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/065/GCA_001801065.1_ASM180106v1	27774985	-
Gallionellales bacterium GWA2_60_142	1798246	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	2.33712	60.2	-	MGWR01	71	2280	2155	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314184	GCA_001801085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/085/GCA_001801085.1_ASM180108v1	27774985	-
Gallionellales bacterium GWA2_60_18	1798247	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	2.12164	61.2	-	MGWS01	34	2097	1985	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314116	GCA_001801105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/105/GCA_001801105.1_ASM180110v1	27774985	-
Gallionellales bacterium GWE2_58_10	1798248	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	0.988621	56.5	-	MGWT01	114	1034	680	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313896	GCA_001801135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/135/GCA_001801135.1_ASM180113v1	27774985	-
Gallionellales bacterium RIFCSPHIGHO2_02_FULL_57_16	1798251	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	4.06769	56.2	-	MGWW01	372	4058	3440	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316137	GCA_001801155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/155/GCA_001801155.1_ASM180115v1	27774985	-
Gallionellales bacterium RIFCSPLOWO2_02_FULL_57_47	1798254	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	2.81329	56.7	-	MGWZ01	127	2679	2522	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315919	GCA_001801175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/175/GCA_001801175.1_ASM180117v1	27774985	-
Gallionellales bacterium RIFCSPLOWO2_02_60_31	1798253	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	1.42203	59	-	MGWY01	477	1552	1182	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313972	GCA_001801165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/165/GCA_001801165.1_ASM180116v1	27774985	-
Gallionellales bacterium RIFCSPLOWO2_02_FULL_59_110	1798255	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	2.80931	59	-	MGXA01	112	2647	2496	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315987	GCA_001801215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/215/GCA_001801215.1_ASM180121v1	27774985	-
Gallionellales bacterium RIFCSPLOWO2_12_FULL_57_18	1798256	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	0.575999	57	-	MGXB01	45	589	529	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315867	GCA_001801235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/235/GCA_001801235.1_ASM180123v1	27774985	-
Gallionellales bacterium RIFCSPLOWO2_12_FULL_59_22	1798257	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	3.11023	58.8	-	MGXC01	129	2919	2728	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315761	GCA_001801255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/255/GCA_001801255.1_ASM180125v1	27774985	-
Gammaproteobacteria bacterium GWE2_37_16	1798261	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.18412	37.3	-	MGXG01	116	1081	927	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313899	GCA_001801285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/285/GCA_001801285.1_ASM180128v1	27774985	-
Gammaproteobacteria bacterium GWE2_42_36	1798262	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.37051	42.1	-	MGXH01	85	1297	1193	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313898	GCA_001801305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/305/GCA_001801305.1_ASM180130v1	27774985	-
Gammaproteobacteria bacterium GWF2_41_13	1798263	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.22005	41.2	-	MGXI01	77	1180	1052	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314224	GCA_001801315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/315/GCA_001801315.1_ASM180131v1	27774985	-
Gammaproteobacteria bacterium RBG_16_37_9	1798264	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.18767	36.5	-	MGXJ01	68	1134	893	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313710	GCA_001801345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/345/GCA_001801345.1_ASM180134v1	27774985	-
Gammaproteobacteria bacterium RBG_16_57_12	1798266	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.98302	57.2	-	MGXL01	148	2002	1568	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313711	GCA_001801365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/365/GCA_001801365.1_ASM180136v1	27774985	-
Gammaproteobacteria bacterium RIFCSPHIGHO2_01_FULL_42_8	1798268	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.47995	41.1	-	MGXN01	119	1501	1229	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314777	GCA_001801375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/375/GCA_001801375.1_ASM180137v1	27774985	-
Gammaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_42_13	1798271	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.47779	42	-	MGXQ01	84	1393	1248	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315408	GCA_001801405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/405/GCA_001801405.1_ASM180140v1	27774985	-
Gammaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_42_43	1798272	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.85509	41.5	-	MGXR01	20	1766	1701	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315324	GCA_001801425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/425/GCA_001801425.1_ASM180142v1	27774985	-
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_38_15	1798273	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.56204	38.3	-	MGXS01	88	1533	1412	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313768	GCA_001801435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/435/GCA_001801435.1_ASM180143v1	27774985	-
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_35_23	1798274	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	2.39852	35	-	MGXT01	28	2218	2126	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315639	GCA_001801465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/465/GCA_001801465.1_ASM180146v1	27774985	-
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_37_14	1798276	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	2.53732	37	-	MGXV01	95	2415	2236	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315663	GCA_001801485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/485/GCA_001801485.1_ASM180148v1	27774985	-
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_37_34	1798277	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.70689	37.4	-	MGXW01	120	1746	1611	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315694	GCA_001801495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/495/GCA_001801495.1_ASM180149v1	27774985	-
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_38_11	1798278	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	2.08117	37.8	-	MGXX01	85	1968	1780	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315634	GCA_001801515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/515/GCA_001801515.1_ASM180151v1	27774985	-
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_38_14	1798279	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.69412	38	-	MGXY01	62	1629	1512	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315664	GCA_001801545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/545/GCA_001801545.1_ASM180154v1	27774985	-
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_41_20	1798283	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	2.03339	40.8	-	MGYC01	41	1870	1787	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315635	GCA_001801575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/575/GCA_001801575.1_ASM180157v1	27774985	-
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_40_19	1798281	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	2.10427	40.2	-	MGYA01	109	2027	1864	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315665	GCA_001801565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/565/GCA_001801565.1_ASM180156v1	27774985	-
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_41_25	1798284	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.81115	41.5	-	MGYD01	23	1738	1669	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315606	GCA_001801605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/605/GCA_001801605.1_ASM180160v1	27774985	-
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_42_10	1798285	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.43104	42	-	MGYE01	85	1394	1210	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315731	GCA_001801625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/625/GCA_001801625.1_ASM180162v1	27774985	-
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_43_28	1798287	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.45714	43.1	-	MGYG01	100	1425	1309	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315666	GCA_001801635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/635/GCA_001801635.1_ASM180163v1	27774985	-
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_45_12	1798288	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.30783	45.2	-	MGYH01	56	1242	1115	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315637	GCA_001801665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/665/GCA_001801665.1_ASM180166v1	27774985	-
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_22	1798290	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	4.25613	63.8	-	MGYJ01	99	4176	3987	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315554	GCA_001801685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/685/GCA_001801685.1_ASM180168v1	27774985	-
Gammaproteobacteria bacterium RIFCSPLOWO2_01_FULL_47_190	1798291	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.43772	47.1	-	MGYK01	118	1484	1366	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315146	GCA_001801695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/695/GCA_001801695.1_ASM180169v1	27774985	-
Gammaproteobacteria bacterium RIFCSPLOWO2_02_47_7	1798292	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	0.945778	46.7	-	MGYL01	119	1060	895	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313790	GCA_001801725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/725/GCA_001801725.1_ASM180172v1	27774985	-
Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_38_11	1798293	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.70049	38.1	-	MGYM01	75	1658	1459	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316000	GCA_001801745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/745/GCA_001801745.1_ASM180174v1	27774985	-
Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_42_14	1798294	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.85042	41.5	-	MGYN01	22	1761	1682	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316065	GCA_001801755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/755/GCA_001801755.1_ASM180175v1	27774985	-
Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_42_9	1798295	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.39502	41.7	-	MGYO01	97	1319	1081	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315931	GCA_001801785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/785/GCA_001801785.1_ASM180178v1	27774985	-
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_36_30	1798275	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.74009	35.6	-	MGXU01	10	1754	1695	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315633	GCA_001801815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/815/GCA_001801815.1_ASM180181v1	27774985	-
Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_47_50	1798296	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.25441	47.1	-	MGYP01	133	1310	1171	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316001	GCA_001801805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/805/GCA_001801805.1_ASM180180v1	27774985	-
Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_56_15	1798298	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	2.44029	54.7	-	MGYR01	216	2395	1888	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316066	GCA_001801825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/825/GCA_001801825.1_ASM180182v1	27774985	-
Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_61_13	1798300	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	3.72932	60.8	-	MGYT01	185	3639	3090	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315979	GCA_001801865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/865/GCA_001801865.1_ASM180186v1	27774985	-
Gammaproteobacteria bacterium RIFCSPLOWO2_12_47_11	1798301	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	2.34567	47.1	-	MGYU01	115	2398	2234	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313797	GCA_001801885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/885/GCA_001801885.1_ASM180188v1	27774985	-
Gammaproteobacteria bacterium RIFCSPLOWO2_12_FULL_38_14	1798302	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.53377	38.4	-	MGYV01	71	1475	1343	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315859	GCA_001801895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/895/GCA_001801895.1_ASM180189v1	27774985	-
Gammaproteobacteria bacterium RIFCSPLOWO2_12_FULL_42_18	1798303	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.85667	41.5	-	MGYW01	22	1767	1697	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315874	GCA_001801915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/915/GCA_001801915.1_ASM180191v1	27774985	-
Gammaproteobacteria bacterium RIFCSPLOWO2_12_FULL_52_10	1798305	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.40324	51.8	-	MGYY01	146	1410	1144	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315884	GCA_001801945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/945/GCA_001801945.1_ASM180194v1	27774985	-
Gammaproteobacteria bacterium RIFOXYA12_FULL_61_12	1798306	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	3.05181	61.1	-	MGYZ01	218	2946	2617	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314407	GCA_001801965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/965/GCA_001801965.1_ASM180196v1	27774985	-
Gammaproteobacteria bacterium RIFOXYD12_FULL_61_37	1798308	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	3.46975	61.3	-	MGZB01	57	3208	3093	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314635	GCA_001801995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/995/GCA_001801995.1_ASM180199v1	27774985	-
Gammaproteobacteria bacterium RIFOXYB2_FULL_38_6	1798307	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	0.944853	37.2	-	MGZA01	548	826	554	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314419	GCA_001801985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/985/GCA_001801985.1_ASM180198v1	27774985	-
Gemmatimonadetes bacterium GWC2_71_9	1798310	PRJNA288027	288027	FCB group	Gemmatimonadetes	2.22728	69.9	-	MGZD01	172	2277	1566	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314204	GCA_001802015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/015/GCA_001802015.1_ASM180201v1	27774985	-
Gemmatimonadetes bacterium RBG_16_66_8	1798311	PRJNA288027	288027	FCB group	Gemmatimonadetes	2.64574	65	-	MGZE01	276	2745	1474	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313750	GCA_001802045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/045/GCA_001802045.1_ASM180204v1	27774985	-
Gemmatimonadetes bacterium RIFCSPLOWO2_02_FULL_71_11	1798312	PRJNA288027	288027	FCB group	Gemmatimonadetes	1.78252	69.7	-	MGZF01	176	1804	1175	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316067	GCA_001802055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/055/GCA_001802055.1_ASM180205v1	27774985	-
Geobacteraceae bacterium GWB2_52_12	1798314	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.96288	51	-	MGZH01	265	2981	2246	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313901	GCA_001802095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/095/GCA_001802095.1_ASM180209v1	27774985	-
Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9	1798313	PRJNA288027	288027	FCB group	Gemmatimonadetes	2.69243	67.7	-	MGZG01	872	2413	1770	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316201	GCA_001802085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/085/GCA_001802085.1_ASM180208v1	27774985	-
Geobacteraceae bacterium GWC2_55_20	1798317	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	4.55056	54.4	-	MGZK01	186	4046	3816	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313903	GCA_001802125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/125/GCA_001802125.1_ASM180212v1	27774985	-
Geobacteraceae bacterium GWC2_58_44	1798318	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	6.22361	59.9	-	MGZL01	147	5084	4902	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314196	GCA_001802135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/135/GCA_001802135.1_ASM180213v1	27774985	-
Geobacteraceae bacterium GWF2_54_21	1798319	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	3.9096	53.7	-	MGZM01	264	3564	3268	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313906	GCA_001802165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/165/GCA_001802165.1_ASM180216v1	27774985	-
Ignavibacteria bacterium GWA2_35_8	1798417	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.20743	34.9	-	MGZP01	149	2856	2464	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313884	GCA_001802185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/185/GCA_001802185.1_ASM180218v1	27774985	-
Ignavibacteria bacterium GWA2_54_16	1798420	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	2.30296	54	-	MGZS01	117	1985	1720	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313887	GCA_001802215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/215/GCA_001802215.1_ASM180221v1	27774985	-
Ignavibacteria bacterium GWA2_35_9	1798418	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.91815	35.4	-	MGZQ01	207	3591	2973	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314178	GCA_001802205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/205/GCA_001802205.1_ASM180220v1	27774985	-
Ignavibacteria bacterium GWA2_55_11	1798421	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.50473	55.3	-	MGZT01	122	3078	2632	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313888	GCA_001802245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/245/GCA_001802245.1_ASM180224v1	27774985	-
Gallionellales bacterium RBG_16_56_9	1798249	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	2.24014	53.9	-	MGWU01	320	2500	1342	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316192	GCA_001802285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/285/GCA_001802285.1_ASM180228v1	27774985	-
Gallionellales bacterium RBG_16_57_15	1798250	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	2.5703	56	-	MGWV01	329	2660	1875	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314264	GCA_001802295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/295/GCA_001802295.1_ASM180229v1	27774985	-
Gallionellales bacterium RIFCSPLOWO2_02_58_13	1798252	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	2.74718	58.2	-	MGWX01	262	2762	2431	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314086	GCA_001802325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/325/GCA_001802325.1_ASM180232v1	27774985	-
Gallionellales bacterium RIFOXYB12_FULL_54_9	1798258	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	1.8366	52.4	-	MGXD01	535	1970	1343	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314463	GCA_001802335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/335/GCA_001802335.1_ASM180233v1	27774985	-
Gallionellales bacterium RIFOXYD12_FULL_53_10	1798259	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	2.24164	52.2	-	MGXE01	151	2247	1742	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314643	GCA_001802355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/355/GCA_001802355.1_ASM180235v1	27774985	-
Gammaproteobacteria bacterium RBG_16_51_14	1798265	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	2.67226	50.3	-	MGXK01	154	2668	2250	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313749	GCA_001802375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/375/GCA_001802375.1_ASM180237v1	27774985	-
Gammaproteobacteria bacterium RBG_16_66_13	1798267	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.56893	64	-	MGXM01	130	1568	1094	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314038	GCA_001802405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/405/GCA_001802405.1_ASM180240v1	27774985	-
Gammaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_38_33	1798269	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.25656	38.3	-	MGXO01	95	1233	1102	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315322	GCA_001802425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/425/GCA_001802425.1_ASM180242v1	27774985	-
Gammaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_39_13	1798270	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.67141	39	-	MGXP01	41	1680	1592	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315397	GCA_001802445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/445/GCA_001802445.1_ASM180244v1	27774985	-
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_39_24	1798280	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.59191	39.1	-	MGXZ01	27	1589	1532	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315605	GCA_001802455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/455/GCA_001802455.1_ASM180245v1	27774985	-
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_41_15	1798282	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	2.05401	40.5	-	MGYB01	109	1877	1726	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315669	GCA_001802485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/485/GCA_001802485.1_ASM180248v1	27774985	-
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_42_13	1798286	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.25728	41.8	-	MGYF01	32	1178	1099	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315636	GCA_001802505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/505/GCA_001802505.1_ASM180250v1	27774985	-
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_45_9	1798289	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	2.35511	45.2	-	MGYI01	192	2152	1762	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316126	GCA_001802525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/525/GCA_001802525.1_ASM180252v1	27774985	-
Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_52_10	1798297	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.58012	50.3	-	MGYQ01	180	1602	1014	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316123	GCA_001802535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/535/GCA_001802535.1_ASM180253v1	27774985	-
Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_57_10	1798299	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	3.39388	56.9	-	MGYS01	100	3120	2763	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315932	GCA_001802565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/565/GCA_001802565.1_ASM180256v1	27774985	-
Gammaproteobacteria bacterium RIFCSPLOWO2_12_FULL_47_76	1798304	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.48548	47.2	-	MGYX01	134	1550	1405	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315830	GCA_001802575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/575/GCA_001802575.1_ASM180257v1	27774985	-
Gemmatimonadetes bacterium GWC2_71_10	1798309	PRJNA288027	288027	FCB group	Gemmatimonadetes	2.25924	69.1	-	MGZC01	205	2340	1548	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314206	GCA_001802605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/605/GCA_001802605.1_ASM180260v1	27774985	-
Geobacteraceae bacterium GWC2_48_7	1798315	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.58544	47.2	-	MGZI01	180	1671	1171	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314200	GCA_001802615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/615/GCA_001802615.1_ASM180261v1	27774985	-
Geobacteraceae bacterium GWC2_53_11	1798316	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	4.28043	52.9	-	MGZJ01	91	3856	3595	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314197	GCA_001802645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/645/GCA_001802645.1_ASM180264v1	27774985	-
Hydrogenophilales bacterium RIFOXYD1_FULL_62_11	1798415	PRJNA288027	288027	Proteobacteria	Hydrogenophilalia	3.60035	60.5	-	MGZO01	133	3662	3110	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314733	GCA_001802655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/655/GCA_001802655.1_ASM180265v1	27774985	-
Ignavibacteria bacterium GWA2_55_25	1798422	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	0.446191	55.3	-	MGZU01	31	434	386	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314180	GCA_001802685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/685/GCA_001802685.1_ASM180268v1	27774985	-
Ignavibacteria bacterium GWB2_35_12	1798423	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.03269	34.9	-	MGZV01	105	3432	3252	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313882	GCA_001802705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/705/GCA_001802705.1_ASM180270v1	27774985	-
Ignavibacteria bacterium GWB2_35_6b	1798424	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.01409	34.2	-	MGZW01	307	3033	2009	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314189	GCA_001802725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/725/GCA_001802725.1_ASM180272v1	27774985	-
Hydrogenophilales bacterium RIFOXYA1_FULL_63_33	1798414	PRJNA288027	288027	Proteobacteria	Hydrogenophilalia	2.15315	62.8	-	MGZN01	920	2538	1858	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314320	GCA_001802715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/715/GCA_001802715.1_ASM180271v1	27774985	-
Ignavibacteria bacterium GWC2_35_8	1798426	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.33882	35	-	MGZY01	257	3099	2518	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314127	GCA_001802785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/785/GCA_001802785.1_ASM180278v1	27774985	-
Ignavibacteria bacterium GWC2_36_12	1798427	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.8316	35.5	-	MGZZ01	194	3425	3064	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314201	GCA_001802795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/795/GCA_001802795.1_ASM180279v1	27774985	-
Ignavibacteria bacterium GWC2_38_9	1798428	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.8189	37.5	-	MHAA01	199	3516	2924	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313883	GCA_001802805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/805/GCA_001802805.1_ASM180280v1	27774985	-
Ignavibacteria bacterium GWF2_35_20	1798431	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.2508	35.3	-	MHAD01	113	3643	3536	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313881	GCA_001802845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/845/GCA_001802845.1_ASM180284v1	27774985	-
Ignavibacteria bacterium RBG_16_34_14	1798433	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	2.74035	33.6	-	MHAF01	174	2560	2281	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313714	GCA_001802865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/865/GCA_001802865.1_ASM180286v1	27774985	-
Ignavibacteria bacterium RBG_16_35_7	1798434	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	2.9946	34.4	-	MHAG01	343	2977	1866	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313732	GCA_001802885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/885/GCA_001802885.1_ASM180288v1	27774985	-
Ignavibacteria bacterium RBG_16_36_9	1798435	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	2.15854	34.8	-	MHAH01	210	2161	1400	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313751	GCA_001802895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/895/GCA_001802895.1_ASM180289v1	27774985	-
Ignavibacteria bacterium RIFCSPLOWO2_02_FULL_55_14	1798437	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.66103	55.5	-	MHAJ01	133	3159	2876	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315933	GCA_001802915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/915/GCA_001802915.1_ASM180291v1	27774985	-
Ignavibacteria bacterium RIFCSPLOWO2_12_FULL_56_21	1798438	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.35719	55.7	-	MHAK01	138	2897	2706	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315831	GCA_001802945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/945/GCA_001802945.1_ASM180294v1	27774985	-
Ignavibacteria bacterium RIFOXYA12_FULL_35_25	1798439	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.17769	35.3	-	MHAL01	128	3592	3465	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316220	GCA_001802955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/955/GCA_001802955.1_ASM180295v1	27774985	-
Ignavibacteria bacterium RIFOXYA2_FULL_35_10	1798441	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.05366	34.8	-	MHAN01	191	3473	3220	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314341	GCA_001802975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/975/GCA_001802975.1_ASM180297v1	27774985	-
Ignavibacteria bacterium RIFOXYA2_FULL_37_17	1798443	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	1.90815	35.7	-	MHAP01	767	1728	999	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316172	GCA_001802995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/995/GCA_001802995.1_ASM180299v1	27774985	-
Ignavibacteria bacterium RIFOXYA2_FULL_38_8	1798444	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.28	37.5	-	MHAQ01	147	3874	3510	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314358	GCA_001803025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/025/GCA_001803025.1_ASM180302v1	27774985	-
Ignavibacteria bacterium RIFOXYB12_FULL_35_14	1798445	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.09886	35.4	-	MHAR01	95	3527	3412	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314468	GCA_001803045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/045/GCA_001803045.1_ASM180304v1	27774985	-
Ignavibacteria bacterium RIFOXYB2_FULL_35_12	1798446	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.09552	35.3	-	MHAS01	108	3546	3391	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314436	GCA_001803055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/055/GCA_001803055.1_ASM180305v1	27774985	-
Ignavibacteria bacterium RIFOXYB2_FULL_36_7	1798447	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	2.17669	34.5	-	MHAT01	585	2183	1262	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314451	GCA_001803075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/075/GCA_001803075.1_ASM180307v1	27774985	-
Ignavibacteria bacterium RIFOXYB2_FULL_37_11	1798448	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.34628	37.6	-	MHAU01	55	3884	3737	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314420	GCA_001803105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/105/GCA_001803105.1_ASM180310v1	27774985	-
Ignavibacteria bacterium RIFOXYC12_FULL_35_11	1798449	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.49113	35.4	-	MHAV01	86	3005	2871	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314613	GCA_001803125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/125/GCA_001803125.1_ASM180312v1	27774985	-
Ignavibacteria bacterium RIFOXYC2_FULL_35_16	1798451	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.11254	35.3	-	MHAX01	91	3540	3418	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314576	GCA_001803135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/135/GCA_001803135.1_ASM180313v1	27774985	-
Ignavibacteria bacterium RIFOXYC2_FULL_38_25	1798453	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.40533	37.6	-	MHAZ01	22	3897	3824	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314561	GCA_001803165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/165/GCA_001803165.1_ASM180316v1	27774985	-
Legionellales bacterium RIFCSPHIGHO2_12_FULL_35_11	1798567	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.74819	34.8	-	MHBB01	168	1624	1475	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315640	GCA_001803185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/185/GCA_001803185.1_ASM180318v1	27774985	-
Lentisphaerae bacterium GWF2_38_69	1798570	PRJNA288027	288027	PVC group	Lentisphaerae	3.12169	37.6	-	MHBE01	66	2847	2750	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313868	GCA_001803205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/205/GCA_001803205.1_ASM180320v1	27774985	-
Lentisphaerae bacterium GWF2_44_16	1798571	PRJNA288027	288027	PVC group	Lentisphaerae	5.16421	44	-	MHBF01	209	4478	4206	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314138	GCA_001803225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/225/GCA_001803225.1_ASM180322v1	27774985	-
Lentisphaerae bacterium RIFOXYA12_64_32	1798577	PRJNA288027	288027	PVC group	Lentisphaerae	10.642	64.9	-	MHBL01	503	7057	6876	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316206	GCA_001803235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/235/GCA_001803235.1_ASM180323v1	27774985	-
Lentisphaerae bacterium RIFOXYA12_FULL_60_10	1798579	PRJNA288027	288027	PVC group	Lentisphaerae	2.05638	59.2	-	MHBN01	244	1887	1404	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314390	GCA_001803255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/255/GCA_001803255.1_ASM180325v1	27774985	-
Lentisphaerae bacterium RIFOXYB12_FULL_60_10	1798580	PRJNA288027	288027	PVC group	Lentisphaerae	3.8067	59.5	-	MHBO01	262	3296	2614	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314461	GCA_001803285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/285/GCA_001803285.1_ASM180328v1	27774985	-
Lentisphaerae bacterium RIFOXYB12_FULL_65_16	1798581	PRJNA288027	288027	PVC group	Lentisphaerae	10.3127	65	-	MHBP01	392	6788	6584	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316207	GCA_001803305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/305/GCA_001803305.1_ASM180330v1	27774985	-
Lentisphaerae bacterium RIFOXYC12_FULL_60_16	1798582	PRJNA288027	288027	PVC group	Lentisphaerae	4.09069	60.1	-	MHBQ01	188	3403	3104	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314619	GCA_001803315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/315/GCA_001803315.1_ASM180331v1	27774985	-
Melioribacter sp. GWF2_38_21	1801612	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.39949	37.6	-	MHBR01	28	3898	3817	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313886	GCA_001803345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/345/GCA_001803345.1_ASM180334v1	27774985	-
Methylophilales bacterium RIFCSPHIGHO2_02_FULL_57_10	1801614	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	1.17306	56.1	-	MHBT01	134	1283	934	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315335	GCA_001803385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/385/GCA_001803385.1_ASM180338v1	27774985	-
Microgenomates group bacterium RBG_16_45_19	1817747	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.36977	47.7	-	MHDC01	45	1431	1345	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313745	GCA_001803415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/415/GCA_001803415.1_ASM180341v1	27774985	-
Microgenomates group bacterium RBG_19FT_COMBO_39_10	1817748	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.654762	37.1	-	MHDD01	46	780	510	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314062	GCA_001803445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/445/GCA_001803445.1_ASM180344v1	27774985	-
Microgenomates group bacterium RIFCSPLOWO2_01_FULL_46_13	1817750	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.866795	45.5	-	MHDF01	9	1001	904	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315219	GCA_001803475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/475/GCA_001803475.1_ASM180347v1	27774985	-
Microgenomates group bacterium RIFCSPHIGHO2_01_FULL_45_11	1817749	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.08341	45.5	-	MHDE01	38	1168	1015	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314936	GCA_001803465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/465/GCA_001803465.1_ASM180346v1	27774985	-
Microgenomates group bacterium RIFCSPLOWO2_01_FULL_47_10	1817751	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.740757	45.8	-	MHDG01	64	868	617	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315310	GCA_001803505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/505/GCA_001803505.1_ASM180350v1	27774985	-
Nitrospinae bacterium RIFCSPLOWO2_12_39_15	1801689	PRJNA288027	288027	Nitrospinae/Tectomicrobia group	Nitrospinae	2.19429	39.2	-	MHDN01	107	2239	2078	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313796	GCA_001803525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/525/GCA_001803525.1_ASM180352v1	27774985	-
Nitrospinae bacterium RIFCSPLOWO2_12_FULL_39_93	1801686	PRJNA288027	288027	Nitrospinae/Tectomicrobia group	Nitrospinae	1.59756	39.2	-	MHDP01	118	1613	1488	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315769	GCA_001803535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/535/GCA_001803535.1_ASM180353v1	27774985	-
Nitrospinae bacterium RIFCSPLOWO2_02_39_17	1801684	PRJNA288027	288027	Nitrospinae/Tectomicrobia group	Nitrospinae	2.7229	39.1	-	MHDL01	184	2838	2584	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314080	GCA_001803575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/575/GCA_001803575.1_ASM180357v1	27774985	-
Nitrospinae bacterium RIFCSPLOWO2_12_FULL_45_22	1801687	PRJNA288027	288027	Nitrospinae/Tectomicrobia group	Nitrospinae	3.66706	45.1	-	MHDQ01	321	3399	3119	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315881	GCA_001803565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/565/GCA_001803565.1_ASM180356v1	27774985	-
Nitrospirae bacterium GWA2_46_11	1801691	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	2.29283	46.6	-	MHDT01	56	2445	2232	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314103	GCA_001803605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/605/GCA_001803605.1_ASM180360v1	27774985	-
Nitrospinae bacterium RIFCSPLOWO2_12_FULL_47_7	1801688	PRJNA288027	288027	Nitrospinae/Tectomicrobia group	Nitrospinae	1.45066	47.1	-	MHDR01	650	1522	1115	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316197	GCA_001803615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/615/GCA_001803615.1_ASM180361v1	27774985	-
Nitrospirae bacterium GWB2_47_37	1801692	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	2.47216	46.4	-	MHDU01	81	2578	2462	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313876	GCA_001803635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/635/GCA_001803635.1_ASM180363v1	27774985	-
Nitrospirae bacterium GWC2_42_7	1801694	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	2.57926	41.7	-	MHDW01	238	2719	2181	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313880	GCA_001803645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/645/GCA_001803645.1_ASM180364v1	27774985	-
Nitrospirae bacterium GWC2_46_6	1801695	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	1.36986	45.7	-	MHDX01	165	1560	1115	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314198	GCA_001803685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/685/GCA_001803685.1_ASM180368v1	27774985	-
Nitrospirae bacterium GWC2_56_14	1801696	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	3.16275	56.1	-	MHDY01	259	2963	2510	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313879	GCA_001803705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/705/GCA_001803705.1_ASM180370v1	27774985	-
Nitrospirae bacterium GWD2_44_7	1801699	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	1.40547	43.2	-	MHEB01	144	1592	1205	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314209	GCA_001803715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/715/GCA_001803715.1_ASM180371v1	27774985	-
Nitrospirae bacterium GWD2_57_8	1801700	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	2.55048	56.4	-	MHEC01	236	2614	1987	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313878	GCA_001803725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/725/GCA_001803725.1_ASM180372v1	27774985	-
Nitrospirae bacterium GWD2_57_9	1801701	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	3.85798	55.5	-	MHED01	291	3844	2874	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314131	GCA_001803765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/765/GCA_001803765.1_ASM180376v1	27774985	-
Nitrospirae bacterium RBG_13_43_8	1801705	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	2.60836	41.7	-	MHEH01	227	2713	1781	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314002	GCA_001803785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/785/GCA_001803785.1_ASM180378v1	27774985	-
Nitrospirae bacterium RBG_16_64_22	1801708	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	2.3785	64.3	-	MHEK01	118	2395	2200	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313704	GCA_001803795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/795/GCA_001803795.1_ASM180379v1	27774985	-
Nitrospirae bacterium RBG_19FT_COMBO_42_15	1801709	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	1.56624	40.9	-	MHEL01	181	1693	1315	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314071	GCA_001803815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/815/GCA_001803815.1_ASM180381v1	27774985	-
Nitrospirae bacterium RBG_19FT_COMBO_55_12	1801710	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	1.74475	52.2	-	MHEM01	172	1951	1067	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314067	GCA_001803845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/845/GCA_001803845.1_ASM180384v1	27774985	-
Nitrospirae bacterium RBG_19FT_COMBO_58_9	1801711	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	2.35147	55.2	-	MHEN01	237	2729	1606	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313683	GCA_001803865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/865/GCA_001803865.1_ASM180386v1	27774985	-
Nitrospirae bacterium RIFCSPHIGHO2_01_FULL_66_17	1801712	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	1.40724	66	-	MHEO01	85	1382	1193	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314791	GCA_001803875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/875/GCA_001803875.1_ASM180387v1	27774985	-
Nitrospirae bacterium RIFCSPHIGHO2_02_FULL_40_19	1801713	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	1.66057	37.8	-	MHEP01	838	1539	943	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316160	GCA_001803885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/885/GCA_001803885.1_ASM180388v1	27774985	-
Nitrospirae bacterium RIFCSPHIGHO2_02_FULL_42_12	1801714	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	1.71985	41.3	-	MHEQ01	186	1826	1396	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315474	GCA_001803925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/925/GCA_001803925.1_ASM180392v1	27774985	-
Nitrospirae bacterium RIFOXYA2_FULL_44_9	1801719	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	1.93318	43.6	-	MHEW01	53	2043	1885	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314343	GCA_001803945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/945/GCA_001803945.1_ASM180394v1	27774985	-
Nitrospirae bacterium RIFOXYB2_FULL_43_5	1801720	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	1.36949	42.6	-	MHEX01	644	1595	1020	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316169	GCA_001803955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/955/GCA_001803955.1_ASM180395v1	27774985	-
Omnitrophica bacterium GWA2_41_15	1801814	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.056	39.4	-	MHEZ01	24	1082	1034	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314168	GCA_001803975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/975/GCA_001803975.1_ASM180397v1	27774985	-
Omnitrophica bacterium GWA2_50_21	1801815	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	0.92178	49	-	MHFA01	79	897	807	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314157	GCA_001804005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/005/GCA_001804005.1_ASM180400v1	27774985	-
Omnitrophica bacterium GWA2_52_8	1801817	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	2.1958	51.4	-	MHFC01	146	1932	1577	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314104	GCA_001804025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/025/GCA_001804025.1_ASM180402v1	27774985	-
Omnitrophica bacterium RBG_13_46_9	1801818	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	2.04538	44.3	-	MHFD01	86	1799	1332	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314093	GCA_001804045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/045/GCA_001804045.1_ASM180404v1	27774985	-
Omnitrophica bacterium RIFCSPHIGHO2_02_FULL_46_11	1801820	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.79055	44.9	-	MHFF01	75	1737	1519	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315388	GCA_001804055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/055/GCA_001804055.1_ASM180405v1	27774985	-
Omnitrophica bacterium RIFCSPHIGHO2_02_FULL_46_20	1801821	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.31247	44.9	-	MHFG01	92	1364	1225	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315404	GCA_001804065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/065/GCA_001804065.1_ASM180406v1	27774985	-
Omnitrophica bacterium RIFCSPHIGHO2_02_FULL_49_9	1801822	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	0.724153	48.2	-	MHFH01	90	812	576	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316140	GCA_001804105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/105/GCA_001804105.1_ASM180410v1	27774985	-
Omnitrophica bacterium RIFCSPHIGHO2_02_FULL_51_18	1801823	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.52665	51.4	-	MHFI01	69	1480	1389	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315400	GCA_001804125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/125/GCA_001804125.1_ASM180412v1	27774985	-
Omnitrophica bacterium RIFCSPHIGHO2_02_FULL_63_14	1801824	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.24372	62.6	-	MHFJ01	74	1302	1093	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315481	GCA_001804145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/145/GCA_001804145.1_ASM180414v1	27774985	-
Omnitrophica bacterium RIFCSPLOWO2_01_FULL_45_10	1801826	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.43378	44.9	-	MHFL01	64	1475	1230	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315140	GCA_001804165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/165/GCA_001804165.1_ASM180416v1	27774985	-
Omnitrophica bacterium RIFCSPHIGHO2_12_FULL_44_12	1801825	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	2.63684	44.1	-	MHFK01	188	2100	1882	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315626	GCA_001804155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/155/GCA_001804155.1_ASM180415v1	27774985	-
Omnitrophica bacterium RIFCSPLOWO2_01_FULL_45_10b	1801827	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.84359	44.8	-	MHFM01	75	1814	1533	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315234	GCA_001804205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/205/GCA_001804205.1_ASM180420v1	27774985	-
Omnitrophica bacterium RIFCSPLOWO2_01_FULL_50_24	1801829	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.20078	49.7	-	MHFO01	82	1235	1089	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315226	GCA_001804225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/225/GCA_001804225.1_ASM180422v1	27774985	-
Omnitrophica bacterium RIFCSPLOWO2_02_FULL_44_11	1801830	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	3.14847	44.4	-	MHFP01	99	2367	2147	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316100	GCA_001804245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/245/GCA_001804245.1_ASM180424v1	27774985	-
Omnitrophica bacterium RIFCSPLOWO2_02_FULL_45_16	1801831	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.35832	44.8	-	MHFQ01	80	1403	1254	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316061	GCA_001804255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/255/GCA_001804255.1_ASM180425v1	27774985	-
Omnitrophica bacterium RIFCSPLOWO2_12_FULL_44_17	1801832	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	3.02012	44.4	-	MHFR01	69	2334	2262	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315821	GCA_001804285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/285/GCA_001804285.1_ASM180428v1	27774985	-
Omnitrophica bacterium RIFCSPLOWO2_12_FULL_45_13	1801833	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.28991	45	-	MHFS01	84	1336	1197	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315824	GCA_001804305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/305/GCA_001804305.1_ASM180430v1	27774985	-
Omnitrophica bacterium RIFCSPLOWO2_12_FULL_50_11	1801834	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	2.23535	49.8	-	MHFT01	107	2081	1919	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315875	GCA_001804315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/315/GCA_001804315.1_ASM180431v1	27774985	-
Omnitrophica bacterium RIFOXYB12_FULL_50_7	1801835	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	2.06216	50	-	MHFU01	176	1780	1455	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314472	GCA_001804345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/345/GCA_001804345.1_ASM180434v1	27774985	-
Omnitrophica WOR_2 bacterium GWA2_37_7	1801837	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.60195	37.1	-	MHFV01	137	1628	1226	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313927	GCA_001804365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/365/GCA_001804365.1_ASM180436v1	27774985	-
Omnitrophica WOR_2 bacterium GWA2_44_7	1801838	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.5516	43.3	-	MHFW01	146	1560	1176	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314183	GCA_001804385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/385/GCA_001804385.1_ASM180438v1	27774985	-
Omnitrophica WOR_2 bacterium GWA2_45_18	1801839	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	2.33574	46.4	-	MHFX01	24	2014	1954	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314102	GCA_001804395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/395/GCA_001804395.1_ASM180439v1	27774985	-
Omnitrophica WOR_2 bacterium GWA2_63_20	1801842	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.4204	63.3	-	MHGA01	46	1410	1307	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314113	GCA_001804415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/415/GCA_001804415.1_ASM180441v1	27774985	-
Omnitrophica WOR_2 bacterium GWB2_45_9	1801843	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	0.776603	42.9	-	MHGB01	82	877	521	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313963	GCA_001804445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/445/GCA_001804445.1_ASM180444v1	27774985	-
Omnitrophica WOR_2 bacterium GWC2_44_8	1801844	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.71475	43.7	-	MHGC01	102	1687	1431	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313922	GCA_001804465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/465/GCA_001804465.1_ASM180446v1	27774985	-
Omnitrophica WOR_2 bacterium GWF2_38_59	1801846	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	2.52572	37.1	-	MHGE01	88	2303	2184	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313924	GCA_001804475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/475/GCA_001804475.1_ASM180447v1	27774985	-
Omnitrophica WOR_2 bacterium GWF2_63_9	1801848	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.46283	62.9	-	MHGG01	103	1425	1145	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314226	GCA_001804485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/485/GCA_001804485.1_ASM180448v1	27774985	-
Ignavibacteria bacterium GWA2_36_19	1798419	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.80883	35.3	-	MGZR01	205	3341	3129	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314179	GCA_001804525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/525/GCA_001804525.1_ASM180452v1	27774985	-
Ignavibacteria bacterium GWB2_36_8	1798425	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.68473	34.9	-	MGZX01	209	3501	2510	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314121	GCA_001804545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/545/GCA_001804545.1_ASM180454v1	27774985	-
Ignavibacteria bacterium GWC2_56_12	1798429	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.13713	55.5	-	MHAB01	164	2785	2442	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313889	GCA_001804555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/555/GCA_001804555.1_ASM180455v1	27774985	-
Ignavibacteria bacterium GWF2_33_9	1798430	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	2.65289	33.1	-	MHAC01	87	2289	2070	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313885	GCA_001804565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/565/GCA_001804565.1_ASM180456v1	27774985	-
Ignavibacteria bacterium RBG_13_36_8	1798432	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.84429	35.5	-	MHAE01	199	3690	2510	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313687	GCA_001804605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/605/GCA_001804605.1_ASM180460v1	27774985	-
Ignavibacteria bacterium RIFCSPHIGHO2_02_FULL_56_12	1798436	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.07319	55.4	-	MHAI01	197	2764	2291	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315409	GCA_001804625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/625/GCA_001804625.1_ASM180462v1	27774985	-
Ignavibacteria bacterium RIFOXYA2_FULL_35_9	1798442	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.93107	35.1	-	MHAO01	226	3485	3071	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314375	GCA_001804645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/645/GCA_001804645.1_ASM180464v1	27774985	-
Ignavibacteria bacterium RIFOXYA12_FULL_38_9	1798440	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.18566	37.5	-	MHAM01	315	3012	2530	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314400	GCA_001804635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/635/GCA_001804635.1_ASM180463v1	27774985	-
Ignavibacteria bacterium RIFOXYC12_FULL_38_8	1798450	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.12292	37.6	-	MHAW01	162	3807	3426	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314620	GCA_001804665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/665/GCA_001804665.1_ASM180466v1	27774985	-
Ignavibacteria bacterium RIFOXYC2_FULL_35_21	1798452	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.15363	34.9	-	MHAY01	105	3513	3391	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314596	GCA_001804705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/705/GCA_001804705.1_ASM180470v1	27774985	-
Ignavibacteria bacterium RIFOXYD12_FULL_36_8	1798454	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.26137	35.2	-	MHBA01	106	3655	3537	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314644	GCA_001804715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/715/GCA_001804715.1_ASM180471v1	27774985	-
Legionellales bacterium RIFCSPHIGHO2_12_FULL_37_14	1798568	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.90242	37.2	-	MHBC01	50	1764	1682	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315670	GCA_001804735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/735/GCA_001804735.1_ASM180473v1	27774985	-
Legionellales bacterium RIFCSPHIGHO2_12_FULL_42_9	1798569	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	2.36891	41.3	-	MHBD01	219	2270	1856	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315734	GCA_001804755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/755/GCA_001804755.1_ASM180475v1	27774985	-
Lentisphaerae bacterium GWF2_45_14	1798572	PRJNA288027	288027	PVC group	Lentisphaerae	3.77693	46.2	-	MHBG01	123	3325	3167	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314141	GCA_001804785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/785/GCA_001804785.1_ASM180478v1	27774985	-
Lentisphaerae bacterium GWF2_49_21	1798573	PRJNA288027	288027	PVC group	Lentisphaerae	5.91513	49.1	-	MHBH01	91	4886	4782	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313869	GCA_001804805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/805/GCA_001804805.1_ASM180480v1	27774985	-
Lentisphaerae bacterium GWF2_50_93	1798574	PRJNA288027	288027	PVC group	Lentisphaerae	6.41964	50.1	-	MHBI01	120	5187	5069	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313866	GCA_001804815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/815/GCA_001804815.1_ASM180481v1	27774985	-
Lentisphaerae bacterium GWF2_52_8	1798575	PRJNA288027	288027	PVC group	Lentisphaerae	3.83168	51.9	-	MHBJ01	208	3478	2900	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313870	GCA_001804825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/825/GCA_001804825.1_ASM180482v1	27774985	-
Lentisphaerae bacterium GWF2_57_35	1798576	PRJNA288027	288027	PVC group	Lentisphaerae	5.05268	56.9	-	MHBK01	74	3891	3780	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313867	GCA_001804865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/865/GCA_001804865.1_ASM180486v1	27774985	-
Lentisphaerae bacterium RIFOXYA12_FULL_48_11	1798578	PRJNA288027	288027	PVC group	Lentisphaerae	5.67889	47.9	-	MHBM01	314	4870	4357	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314404	GCA_001804885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/885/GCA_001804885.1_ASM180488v1	27774985	-
Nitrospinae bacterium RIFCSPHIGHO2_02_39_11	1801680	PRJNA288027	288027	Nitrospinae/Tectomicrobia group	Nitrospinae	1.82247	39.1	-	MHDH01	126	1856	1690	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313774	GCA_001804905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/905/GCA_001804905.1_ASM180490v1	27774985	-
Nitrospinae bacterium RIFCSPHIGHO2_02_FULL_39_82	1801681	PRJNA288027	288027	Nitrospinae/Tectomicrobia group	Nitrospinae	1.58675	39.2	-	MHDI01	107	1608	1485	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315473	GCA_001804915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/915/GCA_001804915.1_ASM180491v1	27774985	-
Nitrospinae bacterium RIFCSPHIGHO2_12_FULL_39_42	1801682	PRJNA288027	288027	Nitrospinae/Tectomicrobia group	Nitrospinae	1.82744	39.2	-	MHDJ01	106	1837	1699	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315550	GCA_001804945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/945/GCA_001804945.1_ASM180494v1	27774985	-
Nitrospinae bacterium RIFCSPLOWO2_01_FULL_39_10	1801683	PRJNA288027	288027	Nitrospinae/Tectomicrobia group	Nitrospinae	2.03885	38.3	-	MHDK01	202	2218	1577	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315042	GCA_001804965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/965/GCA_001804965.1_ASM180496v1	27774985	-
Nitrospinae bacterium RIFCSPLOWO2_02_FULL_39_110	1801685	PRJNA288027	288027	Nitrospinae/Tectomicrobia group	Nitrospinae	1.65963	39.2	-	MHDM01	120	1672	1545	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315992	GCA_001804975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/804/975/GCA_001804975.1_ASM180497v1	27774985	-
Nitrospinae bacterium RIFCSPLOWO2_12_39_16	1801690	PRJNA288027	288027	Nitrospinae/Tectomicrobia group	Nitrospinae	1.88383	38.8	-	MHDO01	157	1991	1748	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313798	GCA_001805005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/005/GCA_001805005.1_ASM180500v1	27774985	-
Nitrospirae bacterium GWA2_42_11	1817752	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	1.73115	41.2	-	MHDS01	161	1862	1535	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314156	GCA_001805025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/025/GCA_001805025.1_ASM180502v1	27774985	-
Nitrospirae bacterium GWC1_57_7	1801693	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	1.73057	56.6	-	MHDV01	203	1785	1300	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314193	GCA_001805045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/045/GCA_001805045.1_ASM180504v1	27774985	-
Nitrospirae bacterium GWC2_57_13	1801697	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	3.31993	57.1	-	MHDZ01	105	3111	2900	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313877	GCA_001805055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/055/GCA_001805055.1_ASM180505v1	27774985	-
Nitrospirae bacterium GWC2_57_9	1801698	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	3.35307	55.8	-	MHEA01	253	3338	2572	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314199	GCA_001805085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/085/GCA_001805085.1_ASM180508v1	27774985	-
Nitrospirae bacterium GWF2_44_13	1801702	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	1.98604	43.7	-	MHEE01	18	2062	1976	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313875	GCA_001805105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/105/GCA_001805105.1_ASM180510v1	27774985	-
Nitrospirae bacterium RBG_13_39_12	1801703	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	2.93369	39.1	-	MHEF01	176	2881	2487	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314018	GCA_001805125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/125/GCA_001805125.1_ASM180512v1	27774985	-
Nitrospirae bacterium RBG_13_41_22	1801704	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	1.79026	39.9	-	MHEG01	209	1870	1592	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313987	GCA_001805135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/135/GCA_001805135.1_ASM180513v1	27774985	-
Nitrospirae bacterium RBG_16_43_11	1801706	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	1.50111	42.3	-	MHEI01	124	1525	1129	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314253	GCA_001805165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/165/GCA_001805165.1_ASM180516v1	27774985	-
Nitrospirae bacterium RBG_16_43_8	1801707	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	1.2487	41.3	-	MHEJ01	107	1402	932	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314030	GCA_001805185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/185/GCA_001805185.1_ASM180518v1	27774985	-
Nitrospirae bacterium RIFCSPLOW2_12_42_9	1801722	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	2.0537	41.7	-	MHER01	208	2147	1897	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313969	GCA_001805205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/205/GCA_001805205.1_ASM180520v1	27774985	-
Nitrospirae bacterium RIFCSPLOWO2_02_42_7	1801716	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	1.15635	41.6	-	MHET01	133	1218	1023	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314081	GCA_001805235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/235/GCA_001805235.1_ASM180523v1	27774985	-
Nitrospirae bacterium RIFCSPLOWO2_02_FULL_62_14	1801717	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	2.65937	61.4	-	MHEU01	76	2635	2322	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315937	GCA_001805245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/245/GCA_001805245.1_ASM180524v1	27774985	-
Nitrospirae bacterium RIFCSPLOWO2_01_FULL_62_17	1801715	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	2.27356	61.6	-	MHES01	159	2289	1924	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315241	GCA_001805225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/225/GCA_001805225.1_ASM180522v1	27774985	-
Nitrospirae bacterium RIFCSPLOWO2_12_FULL_63_8	1801718	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	2.57168	61.1	-	MHEV01	1071	2596	1766	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316199	GCA_001805285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/285/GCA_001805285.1_ASM180528v1	27774985	-
Omnitrophica bacterium GWA2_52_12	1801816	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.03041	52.5	-	MHFB01	17	728	639	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313923	GCA_001805305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/305/GCA_001805305.1_ASM180530v1	27774985	-
Omnitrophica bacterium RIFCSPHIGHO2_02_FULL_45_28	1801819	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	3.07542	44.6	-	MHFE01	62	2230	2172	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315325	GCA_001805325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/325/GCA_001805325.1_ASM180532v1	27774985	-
Nitrospirae bacterium RIFOXYC2_FULL_44_7	1801721	PRJNA288027	288027	Nitrospirae	unclassified Nitrospirae	1.67639	42.9	-	MHEY01	457	1910	1259	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314605	GCA_001805295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/295/GCA_001805295.1_ASM180529v1	27774985	-
Omnitrophica bacterium RIFCSPLOWO2_01_FULL_45_24	1801828	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.33392	45.2	-	MHFN01	87	1372	1259	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316204	GCA_001805365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/365/GCA_001805365.1_ASM180536v1	27774985	-
Omnitrophica WOR_2 bacterium GWA2_53_43	1801841	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.02566	52.9	-	MHFZ01	32	1024	978	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313926	GCA_001805395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/395/GCA_001805395.1_ASM180539v1	27774985	-
Omnitrophica WOR_2 bacterium GWA2_47_8	1801840	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	2.40036	46.6	-	MHFY01	157	2325	1882	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314109	GCA_001805375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/375/GCA_001805375.1_ASM180537v1	27774985	-
Omnitrophica WOR_2 bacterium GWC2_45_7	1801845	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.34007	44.8	-	MHGD01	98	1293	1041	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313925	GCA_001805405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/405/GCA_001805405.1_ASM180540v1	27774985	-
Omnitrophica WOR_2 bacterium GWF2_43_52	1801847	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	2.47217	43.5	-	MHGF01	40	2242	2159	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313921	GCA_001805445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/445/GCA_001805445.1_ASM180544v1	27774985	-
Omnitrophica WOR_2 bacterium RBG_13_41_10	1801849	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.29887	39.4	-	MHGH01	22	1379	1189	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314287	GCA_001805465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/465/GCA_001805465.1_ASM180546v1	27774985	-
Omnitrophica WOR_2 bacterium RBG_13_44_8	1801850	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	0.82768	38.5	-	MHGI01	99	991	392	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316243	GCA_001805475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/475/GCA_001805475.1_ASM180547v1	27774985	-
Omnitrophica WOR_2 bacterium RBG_13_44_8b	1801836	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.3807	41.9	-	MHGJ01	113	1601	972	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316272	GCA_001805485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/485/GCA_001805485.1_ASM180548v1	27774985	-
Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_01_FULL_48_9	1801851	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	2.05604	47.4	-	MHGK01	143	2041	1683	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314940	GCA_001805525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/525/GCA_001805525.1_ASM180552v1	27774985	-
Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_01_FULL_49_10	1801852	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.08626	49.2	-	MHGL01	93	1200	934	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315032	GCA_001805545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/545/GCA_001805545.1_ASM180554v1	27774985	-
Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_01_FULL_52_10	1801853	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	0.898107	51.2	-	MHGM01	105	1043	812	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314858	GCA_001805565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/565/GCA_001805565.1_ASM180556v1	27774985	-
Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_45_21	1801854	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.31244	44.6	-	MHGN01	75	1395	1272	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316139	GCA_001805575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/575/GCA_001805575.1_ASM180557v1	27774985	-
Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_46_37	1801855	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	0.764338	45.7	-	MHGO01	73	825	732	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315480	GCA_001805605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/605/GCA_001805605.1_ASM180560v1	27774985	-
Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_48_11	1801856	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	2.01293	47.5	-	MHGP01	95	1916	1698	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315463	GCA_001805615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/615/GCA_001805615.1_ASM180561v1	27774985	-
Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_50_17	1801857	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.92421	49.9	-	MHGQ01	77	1884	1770	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315540	GCA_001805645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/645/GCA_001805645.1_ASM180564v1	27774985	-
Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_52_10	1801858	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.56453	51.8	-	MHGR01	137	1603	1344	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315389	GCA_001805655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/655/GCA_001805655.1_ASM180565v1	27774985	-
Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_63_39	1801859	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.3951	63.4	-	MHGS01	61	1297	1200	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315326	GCA_001805685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/685/GCA_001805685.1_ASM180568v1	27774985	-
Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_67_20	1801860	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	0.844698	66.5	-	MHGT01	42	841	754	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315331	GCA_001805695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/695/GCA_001805695.1_ASM180569v1	27774985	-
Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_68_15	1801861	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.82052	67.2	-	MHGU01	109	1796	1513	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315406	GCA_001805725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/725/GCA_001805725.1_ASM180572v1	27774985	-
Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_12_FULL_64_13	1801862	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.01448	63.1	-	MHGV01	94	1013	850	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315608	GCA_001805735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/735/GCA_001805735.1_ASM180573v1	27774985	-
Omnitrophica WOR_2 bacterium RIFCSPLOWO2_01_FULL_41_12	1801863	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	0.704252	41.3	-	MHGW01	52	746	616	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315137	GCA_001805765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/765/GCA_001805765.1_ASM180576v1	27774985	-
Omnitrophica WOR_2 bacterium RIFCSPLOWO2_02_FULL_45_28	1801864	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	0.909001	45.4	-	MHGX01	80	989	874	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315929	GCA_001805775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/775/GCA_001805775.1_ASM180577v1	27774985	-
Omnitrophica WOR_2 bacterium RIFCSPLOWO2_02_FULL_50_19	1801865	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.25195	49.5	-	MHGY01	101	1331	1184	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316031	GCA_001805805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/805/GCA_001805805.1_ASM180580v1	27774985	-
Omnitrophica WOR_2 bacterium RIFCSPLOWO2_02_FULL_63_16	1801866	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.70241	63.1	-	MHGZ01	62	1599	1422	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316059	GCA_001805815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/815/GCA_001805815.1_ASM180581v1	27774985	-
Omnitrophica WOR_2 bacterium RIFCSPLOWO2_12_FULL_46_30	1801867	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	0.865632	45.8	-	MHHA01	79	924	819	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315825	GCA_001805845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/845/GCA_001805845.1_ASM180584v1	27774985	-
Omnitrophica WOR_2 bacterium RIFCSPLOWO2_12_FULL_50_9	1801868	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.23654	50.1	-	MHHB01	101	1294	1146	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315879	GCA_001805855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/855/GCA_001805855.1_ASM180585v1	27774985	-
Omnitrophica WOR_2 bacterium RIFCSPLOWO2_12_FULL_51_24	1801869	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	0.925803	50.5	-	MHHC01	75	994	897	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315775	GCA_001805885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/885/GCA_001805885.1_ASM180588v1	27774985	-
Omnitrophica WOR_2 bacterium RIFCSPLOWO2_12_FULL_51_8	1801870	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	0.936235	50.6	-	MHHD01	79	947	828	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315826	GCA_001805895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/895/GCA_001805895.1_ASM180589v1	27774985	-
Omnitrophica WOR_2 bacterium RIFCSPLOWO2_12_FULL_63_16	1801871	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.65354	63.3	-	MHHE01	51	1552	1444	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315876	GCA_001805925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/925/GCA_001805925.1_ASM180592v1	27774985	-
Omnitrophica WOR_2 bacterium RIFOXYA12_FULL_38_10	1801872	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	2.27093	37.5	-	MHHF01	154	2221	1959	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314388	GCA_001805945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/945/GCA_001805945.1_ASM180594v1	27774985	-
Omnitrophica WOR_2 bacterium RIFOXYA2_FULL_38_17	1801873	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	2.67715	37.5	-	MHHG01	78	2422	2292	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314364	GCA_001805965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/965/GCA_001805965.1_ASM180596v1	27774985	-
Omnitrophica WOR_2 bacterium RIFOXYA2_FULL_45_12	1801874	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	0.963262	43.9	-	MHHH01	106	1020	749	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314337	GCA_001805975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/975/GCA_001805975.1_ASM180597v1	27774985	-
Omnitrophica WOR_2 bacterium RIFOXYB2_FULL_38_16	1801875	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	2.74648	37.6	-	MHHI01	95	2494	2351	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314427	GCA_001805995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/805/995/GCA_001805995.1_ASM180599v1	27774985	-
Omnitrophica WOR_2 bacterium RIFOXYB2_FULL_45_11	1801876	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	0.948365	43.2	-	MHHJ01	118	999	699	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314442	GCA_001806025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/025/GCA_001806025.1_ASM180602v1	27774985	-
Omnitrophica WOR_2 bacterium RIFOXYC2_FULL_38_12	1801877	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	2.75002	37.5	-	MHHK01	86	2493	2227	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314568	GCA_001806045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/045/GCA_001806045.1_ASM180604v1	27774985	-
Omnitrophica WOR_2 bacterium RIFOXYC2_FULL_43_9	1801878	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	2.03736	42.8	-	MHHL01	160	1992	1517	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314581	GCA_001806055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/055/GCA_001806055.1_ASM180605v1	27774985	-
Omnitrophica WOR_2 bacterium RIFOXYC2_FULL_45_15	1801879	PRJNA288027	288027	PVC group	Candidatus Omnitrophica	1.20127	43.6	-	MHHM01	124	1269	896	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314592	GCA_001806075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/075/GCA_001806075.1_ASM180607v1	27774985	-
Gallionellales bacterium RIFOXYD2_FULL_52_7	1798260	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	1.60731	50.6	-	MGXF01	695	1797	1024	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316188	GCA_001806235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/235/GCA_001806235.1_ASM180623v1	27774985	-
Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_42_39	1797876	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.86412	41.9	-	MGSA01	128	1858	1726	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315935	GCA_001806225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/225/GCA_001806225.1_ASM180622v1	27774985	-
Granulibacter bethesdensis CGDNIH4	1052095	PRJNA68649	68649	Proteobacteria	Alphaproteobacteria	2.72989	58.7	chromosome:NZ_CP003182.2/CP003182.2	-	1	2482	2391	2/20/14	4/5/17	Complete Genome	Integrated Genomics	SAMN03081434	GCA_000576145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/145/GCA_000576145.2_ASM57614v2	-	CGDNIH4
Oligella sp. HMSC05A10	1581112	PRJNA269881	269881	Proteobacteria	Betaproteobacteria	2.42154	46.1	-	LWNE01	128	2274	2173	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03609715	GCA_001808335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/335/GCA_001808335.1_ASM180833v1	-	HMSC05A10
Candidatus Niyogibacteria bacterium RIFCSPHIGHO2_01_FULL_45_28	1801723	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.686201	45.5	-	MHMP01	65	797	682	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314988	GCA_001819455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/455/GCA_001819455.1_ASM181945v1	27774985	-
Candidatus Portnoybacteria bacterium RBG_13_41_18	1801991	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.673036	38.3	-	MHMV01	59	755	450	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314295	GCA_001819475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/475/GCA_001819475.1_ASM181947v1	27774985	-
Candidatus Portnoybacteria bacterium RBG_19FT_COMBO_36_7	1801992	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.761679	41.3	-	MHMW01	31	803	732	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314019	GCA_001819495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/495/GCA_001819495.1_ASM181949v1	27774985	-
Candidatus Portnoybacteria bacterium RIFCSPHIGHO2_01_FULL_39_19	1801993	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.576061	36.2	-	MHMX01	39	723	540	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313681	GCA_001819505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/505/GCA_001819505.1_ASM181950v1	27774985	-
Candidatus Portnoybacteria bacterium RIFCSPHIGHO2_01_FULL_40_12b	1801994	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.565585	39	-	MHMY01	24	625	553	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314968	GCA_001819535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/535/GCA_001819535.1_ASM181953v1	27774985	-
Candidatus Portnoybacteria bacterium RIFCSPHIGHO2_02_FULL_39_12	1801995	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.71209	39.6	-	MHMZ01	38	764	680	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314799	GCA_001819555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/555/GCA_001819555.1_ASM181955v1	27774985	-
Candidatus Portnoybacteria bacterium RIFCSPHIGHO2_02_FULL_40_23	1801996	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.418652	38.6	-	MHNA01	23	498	421	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315491	GCA_001819575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/575/GCA_001819575.1_ASM181957v1	27774985	-
Candidatus Portnoybacteria bacterium RIFCSPLOWO2_01_FULL_38_39	1801999	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.711422	39.4	-	MHND01	51	771	658	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315673	GCA_001819585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/585/GCA_001819585.1_ASM181958v1	27774985	-
Candidatus Portnoybacteria bacterium RIFCSPLOWO2_01_FULL_43_11	1802000	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.702366	38.3	-	MHNE01	33	755	684	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315247	GCA_001819605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/605/GCA_001819605.1_ASM181960v1	27774985	-
Candidatus Portnoybacteria bacterium RIFCSPLOWO2_02_FULL_39_11	1802001	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.740603	42.9	-	MHNF01	62	805	664	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315257	GCA_001819635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/635/GCA_001819635.1_ASM181963v1	27774985	-
Candidatus Portnoybacteria bacterium RIFCSPLOWO2_12_FULL_39_9	1802003	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.73877	39.6	-	MHNH01	37	793	715	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316076	GCA_001819665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/665/GCA_001819665.1_ASM181966v1	27774985	-
Candidatus Portnoybacteria bacterium RIFCSPLOWO2_02_FULL_40_15	1802002	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.687301	38.5	-	MHNG01	36	730	620	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316008	GCA_001819655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/655/GCA_001819655.1_ASM181965v1	27774985	-
Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_45_13	1802112	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.968492	44.3	-	MHNI01	31	1012	935	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313762	GCA_001819695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/695/GCA_001819695.1_ASM181969v1	27774985	-
Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_44_130	1802113	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.876838	44.1	-	MHNJ01	15	905	846	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314871	GCA_001819715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/715/GCA_001819715.1_ASM181971v1	27774985	-
Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_45_22	1802114	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.00469	44.7	-	MHNK01	23	1137	1056	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314872	GCA_001819735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/735/GCA_001819735.1_ASM181973v1	27774985	-
Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_48_27	1802115	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.22603	48.3	-	MHNL01	39	1327	1225	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314909	GCA_001819745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/745/GCA_001819745.1_ASM181974v1	27774985	-
Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_48_80	1802116	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.497584	47.5	-	MHNM01	49	533	465	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314997	GCA_001819775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/775/GCA_001819775.1_ASM181977v1	27774985	-
Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_02_FULL_45_13b	1802117	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.840755	44.6	-	MHNN01	29	921	844	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316142	GCA_001819785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/785/GCA_001819785.1_ASM181978v1	27774985	-
Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_02_FULL_45_17b	1802118	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.836986	44.5	-	MHNO01	15	920	856	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316143	GCA_001819815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/815/GCA_001819815.1_ASM181981v1	27774985	-
Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_02_FULL_45_43	1802119	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.887467	44.1	-	MHNP01	17	925	859	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315433	GCA_001819835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/835/GCA_001819835.1_ASM181983v1	27774985	-
Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_02_FULL_47_25	1802120	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.647689	47.2	-	MHNQ01	50	709	629	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315436	GCA_001819855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/855/GCA_001819855.1_ASM181985v1	27774985	-
Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_02_FULL_48_12	1802121	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.990529	48.2	-	MHNR01	32	1077	947	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315437	GCA_001819875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/875/GCA_001819875.1_ASM181987v1	27774985	-
Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_12_FULL_44_20	1802122	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.876185	44.1	-	MHNS01	16	905	837	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315607	GCA_001819895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/895/GCA_001819895.1_ASM181989v1	27774985	-
Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_12_FULL_47_12b	1802123	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.68957	47	-	MHNT01	51	773	618	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315678	GCA_001819905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/905/GCA_001819905.1_ASM181990v1	27774985	-
Candidatus Ryanbacteria bacterium RIFCSPLOWO2_01_FULL_44_230	1802124	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.89244	44.1	-	MHNU01	16	924	864	10/21/16	10/21/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04315170	GCA_001819935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/935/GCA_001819935.1_ASM181993v1	27774985	-
Candidatus Ryanbacteria bacterium RIFCSPLOWO2_01_FULL_48_26	1802126	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.783717	47.7	-	MHNW01	47	811	729	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315278	GCA_001819945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/945/GCA_001819945.1_ASM181994v1	27774985	-
Candidatus Spechtbacteria bacterium RIFCSPHIGHO2_01_FULL_38_11	1802157	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.604892	37.6	-	MHOC01	48	676	530	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314881	GCA_001819975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/975/GCA_001819975.1_ASM181997v1	27774985	-
Candidatus Spechtbacteria bacterium RIFCSPHIGHO2_02_FULL_43_15b	1802159	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.939072	42.5	-	MHOE01	34	912	813	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315349	GCA_001819985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/985/GCA_001819985.1_ASM181998v1	27774985	-
Candidatus Spechtbacteria bacterium RIFCSPLOWO2_01_FULL_43_12	1802162	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.455394	42.9	-	MHOH01	20	502	415	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315072	GCA_001820015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/015/GCA_001820015.1_ASM182001v1	27774985	-
Candidatus Spechtbacteria bacterium RIFCSPLOWO2_01_FULL_46_10	1802163	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.463299	45.4	-	MHOI01	40	514	340	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315085	GCA_001820035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/035/GCA_001820035.1_ASM182003v1	27774985	-
Candidatus Spechtbacteria bacterium RIFCSPLOWO2_12_FULL_38_22	1802165	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.623063	37.9	-	MHOK01	24	675	606	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315782	GCA_001820055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/055/GCA_001820055.1_ASM182005v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFCSPHIGHO2_01_FULL_34_27	1802199	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.598313	33.9	-	MHOL01	24	674	610	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314792	GCA_001820065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/065/GCA_001820065.1_ASM182006v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFCSPHIGHO2_01_FULL_39_25	1802202	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.743289	39.3	-	MHOO01	12	798	743	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314883	GCA_001820095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/095/GCA_001820095.1_ASM182009v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFCSPHIGHO2_01_FULL_41_41	1802203	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.866573	42.7	-	MHOP01	29	994	925	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314975	GCA_001820115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/115/GCA_001820115.1_ASM182011v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFCSPHIGHO2_02_FULL_34_9	1802206	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.687622	33.4	-	MHOS01	50	757	628	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315488	GCA_001820145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/145/GCA_001820145.1_ASM182014v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFCSPHIGHO2_02_FULL_33_16	1802204	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.732447	32.9	-	MHOQ01	47	779	688	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315487	GCA_001820135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/135/GCA_001820135.1_ASM182013v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFCSPHIGHO2_02_FULL_42_22	1802207	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.821145	41.8	-	MHOT01	30	895	843	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315497	GCA_001820175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/175/GCA_001820175.1_ASM182017v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFCSPHIGHO2_12_FULL_38_11	1802209	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.435488	37.9	-	MHOV01	36	513	441	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315735	GCA_001820195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/195/GCA_001820195.1_ASM182019v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFCSPLOWO2_01_FULL_33_13	1802210	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.697532	33	-	MHOW01	27	748	670	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315133	GCA_001820215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/215/GCA_001820215.1_ASM182021v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFCSPLOWO2_01_FULL_37_19	1802212	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.694087	36.9	-	MHOY01	25	792	723	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315044	GCA_001820225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/225/GCA_001820225.1_ASM182022v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFCSPLOWO2_01_FULL_38_12b	1802214	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.836506	37.9	-	MHPA01	33	952	848	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315061	GCA_001820255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/255/GCA_001820255.1_ASM182025v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFCSPLOWO2_01_FULL_40_39	1802215	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.817241	39.4	-	MHPB01	21	866	806	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315251	GCA_001820275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/275/GCA_001820275.1_ASM182027v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFOXYA1_FULL_37_15	1802219	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.736672	36.8	-	MHPF01	9	819	763	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314326	GCA_001820295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/295/GCA_001820295.1_ASM182029v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFCSPLOWO2_01_FULL_43_17b	1802216	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.790665	43.3	-	MHPC01	10	885	817	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315165	GCA_001820305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/305/GCA_001820305.1_ASM182030v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFOXYA12_FULL_37_10	1802220	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.727491	36.7	-	MHPG01	41	819	737	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314401	GCA_001820325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/325/GCA_001820325.1_ASM182032v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFOXYA2_FULL_32_7	1802221	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.821629	31.6	-	MHPH01	76	903	748	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314377	GCA_001820355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/355/GCA_001820355.1_ASM182035v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFOXYB2_FULL_32_9	1802225	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.902102	31.6	-	MHPL01	55	992	902	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314433	GCA_001820375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/375/GCA_001820375.1_ASM182037v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFOXYB2_FULL_37_10	1802226	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.743406	36.6	-	MHPM01	23	836	757	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314446	GCA_001820395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/395/GCA_001820395.1_ASM182039v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFOXYC1_FULL_37_43	1802227	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.760381	36.8	-	MHPN01	8	839	786	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314523	GCA_001820405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/405/GCA_001820405.1_ASM182040v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFOXYC1_FULL_37_52	1802228	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.82555	37	-	MHPO01	30	923	855	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314537	GCA_001820435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/435/GCA_001820435.1_ASM182043v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFOXYC2_FULL_37_17	1802232	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.760098	36.8	-	MHPS01	9	841	781	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314560	GCA_001820445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/445/GCA_001820445.1_ASM182044v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFOXYC2_FULL_37_19	1802233	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.760823	36.9	-	MHPT01	57	870	733	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314565	GCA_001820475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/475/GCA_001820475.1_ASM182047v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFOXYD1_FULL_32_13	1802234	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.02843	31.7	-	MHPU01	44	1116	1020	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314714	GCA_001820485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/485/GCA_001820485.1_ASM182048v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFOXYD1_FULL_37_110	1802235	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.757236	37	-	MHPV01	26	842	789	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314734	GCA_001820515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/515/GCA_001820515.1_ASM182051v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFOXYD1_FULL_37_73	1802236	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.761321	36.8	-	MHPW01	10	839	787	10/21/16	10/21/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04314754	GCA_001820535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/535/GCA_001820535.1_ASM182053v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFOXYD12_FULL_37_10	1802238	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.728516	36.6	-	MHPY01	24	826	718	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314631	GCA_001820555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/555/GCA_001820555.1_ASM182055v1	27774985	-
Candidatus Sungbacteria bacterium RIFCSPHIGHO2_01_FULL_47_32	1802264	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.21377	46.6	-	MHQC01	59	1328	1241	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314786	GCA_001820565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/565/GCA_001820565.1_ASM182056v1	27774985	-
Candidatus Sungbacteria bacterium RIFCSPHIGHO2_02_FULL_49_12	1802271	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.647934	48.7	-	MHQJ01	54	708	572	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315364	GCA_001820595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/595/GCA_001820595.1_ASM182059v1	27774985	-
Candidatus Sungbacteria bacterium RIFCSPHIGHO2_02_FULL_49_20	1802272	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.662665	48.7	-	MHQK01	56	701	616	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315365	GCA_001820605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/605/GCA_001820605.1_ASM182060v1	27774985	-
Candidatus Sungbacteria bacterium RIFCSPHIGHO2_02_FULL_51_29	1802273	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.17864	51.2	-	MHQL01	69	1212	1114	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315369	GCA_001820635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/635/GCA_001820635.1_ASM182063v1	27774985	-
Candidatus Sungbacteria bacterium RIFCSPHIGHO2_02_FULL_52_23	1802274	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.695015	52.4	-	MHQM01	51	742	681	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316146	GCA_001820655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/655/GCA_001820655.1_ASM182065v1	27774985	-
Candidatus Sungbacteria bacterium RIFCSPLOWO2_01_FULL_47_10	1802276	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.09746	46.4	-	MHQO01	84	1187	936	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315087	GCA_001820675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/675/GCA_001820675.1_ASM182067v1	27774985	-
Candidatus Sungbacteria bacterium RIFCSPLOWO2_01_FULL_47_32	1802277	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.14753	46.6	-	MHQP01	48	1215	1140	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315181	GCA_001820685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/685/GCA_001820685.1_ASM182068v1	27774985	-
Candidatus Sungbacteria bacterium RIFCSPLOWO2_01_FULL_51_34	1802278	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.09377	51.2	-	MHQQ01	81	1163	1052	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315282	GCA_001820715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/715/GCA_001820715.1_ASM182071v1	27774985	-
Candidatus Sungbacteria bacterium RIFCSPLOWO2_01_FULL_54_21	1802279	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.767394	53.7	-	MHQR01	37	831	750	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315287	GCA_001820725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/725/GCA_001820725.1_ASM182072v1	27774985	-
Candidatus Sungbacteria bacterium RIFCSPLOWO2_01_FULL_60_25	1802281	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.72551	59.6	-	MHQT01	44	754	688	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315197	GCA_001820755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/755/GCA_001820755.1_ASM182075v1	27774985	-
Candidatus Sungbacteria bacterium RIFCSPLOWO2_12_FULL_41_11	1802286	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.31018	41.3	-	MHQY01	45	1384	1279	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315837	GCA_001820775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/775/GCA_001820775.1_ASM182077v1	27774985	-
Candidatus Sungbacteria bacterium RIFCSPLOWO2_02_FULL_51_17	1802284	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.24279	51.1	-	MHQW01	49	1287	1177	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316032	GCA_001820785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/785/GCA_001820785.1_ASM182078v1	27774985	-
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_39_11	1802295	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.613061	38.5	-	MHQZ01	46	661	535	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315062	GCA_001820815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/815/GCA_001820815.1_ASM182081v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_01_FULL_43_120	1802297	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.790353	43.1	-	MHRB01	45	797	747	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314978	GCA_001820825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/825/GCA_001820825.1_ASM182082v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_01_FULL_45_63	1802300	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.725068	44.8	-	MHRE01	55	798	722	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314989	GCA_001820855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/855/GCA_001820855.1_ASM182085v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_01_FULL_46_22b	1802301	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.921489	45.4	-	MHRF01	13	988	929	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314817	GCA_001820875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/875/GCA_001820875.1_ASM182087v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_01_FULL_48_38	1802302	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.556114	47.5	-	MHRG01	19	645	576	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314823	GCA_001820885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/885/GCA_001820885.1_ASM182088v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_01_FULL_49_60	1802303	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.884588	49.9	-	MHRH01	58	897	847	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314912	GCA_001820905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/905/GCA_001820905.1_ASM182090v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_01_FULL_51_15	1802304	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.849092	50.8	-	MHRI01	36	854	767	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315002	GCA_001820935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/935/GCA_001820935.1_ASM182093v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_FULL_43_32b	1802306	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.0112	43.3	-	MHRK01	63	1006	960	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315425	GCA_001820955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/955/GCA_001820955.1_ASM182095v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_FULL_44_36	1802309	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.59251	44.4	-	MHRN01	43	667	595	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315505	GCA_001820965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/965/GCA_001820965.1_ASM182096v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_FULL_45_35	1802311	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.783811	44.8	-	MHRP01	50	848	774	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315509	GCA_001820985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/820/985/GCA_001820985.1_ASM182098v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_FULL_46_13	1802312	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.887479	45.7	-	MHRQ01	32	963	876	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315359	GCA_001821015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/015/GCA_001821015.1_ASM182101v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_12_FULL_42_34	1802314	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.968467	42.9	-	MHRS01	38	983	929	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315644	GCA_001821035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/035/GCA_001821035.1_ASM182103v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_12_FULL_45_16	1802315	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.754352	44.7	-	MHRT01	12	801	742	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315739	GCA_001821055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/055/GCA_001821055.1_ASM182105v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPLOWO2_01_FULL_43_44	1802316	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.920131	43.7	-	MHRU01	62	898	849	10/21/16	10/21/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04315261	GCA_001821065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/065/GCA_001821065.1_ASM182106v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPLOWO2_01_FULL_44_26	1802318	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.460018	44	-	MHRW01	12	485	448	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315264	GCA_001821095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/095/GCA_001821095.1_ASM182109v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPLOWO2_01_FULL_45_59	1802321	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.724427	44.6	-	MHRZ01	7	774	720	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315176	GCA_001821115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/115/GCA_001821115.1_ASM182111v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPLOWO2_01_FULL_48_100	1802322	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.644823	47.6	-	MHSA01	25	737	664	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315091	GCA_001821135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/135/GCA_001821135.1_ASM182113v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPLOWO2_01_FULL_50_130	1802323	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.691763	49.6	-	MHSB01	62	714	657	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315280	GCA_001821155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/155/GCA_001821155.1_ASM182115v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPLOWO2_02_50_13	1802324	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.974506	49.7	-	MHSC01	61	985	922	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313786	GCA_001821165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/165/GCA_001821165.1_ASM182116v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPLOWO2_02_FULL_43_11	1802325	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.02486	43.3	-	MHSD01	68	1038	949	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315945	GCA_001821185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/185/GCA_001821185.1_ASM182118v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPLOWO2_02_FULL_43_22b	1802326	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.964122	43	-	MHSE01	38	987	925	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315946	GCA_001821215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/215/GCA_001821215.1_ASM182121v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPLOWO2_02_FULL_45_10b	1802328	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.748155	44.5	-	MHSG01	24	819	700	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316086	GCA_001821235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/235/GCA_001821235.1_ASM182123v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPLOWO2_02_FULL_46_40	1802329	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.752271	46.3	-	MHSH01	62	764	699	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315956	GCA_001821245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/245/GCA_001821245.1_ASM182124v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPLOWO2_02_FULL_50_120	1802331	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.799328	49.7	-	MHSJ01	63	819	747	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315961	GCA_001821275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/275/GCA_001821275.1_ASM182127v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPLOWO2_12_FULL_43_20	1802332	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.0084	43	-	MHSK01	38	1017	961	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315840	GCA_001821295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/295/GCA_001821295.1_ASM182129v1	27774985	-
Candidatus Liptonbacteria bacterium RIFCSPLOWO2_12_FULL_60_15	1798653	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.576937	59.8	-	MHLD01	46	656	564	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315852	GCA_001821315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/315/GCA_001821315.1_ASM182131v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPLOWO2_02_FULL_48_16	1802330	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.706266	47.5	-	MHSI01	17	797	715	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316119	GCA_001821305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/305/GCA_001821305.1_ASM182130v1	27774985	-
Candidatus Liptonbacteria bacterium RIFOXYB1_FULL_36_10	1798654	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.582116	35.7	-	MHLE01	44	649	514	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314511	GCA_001821355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/355/GCA_001821355.1_ASM182135v1	27774985	-
Candidatus Liptonbacteria bacterium RIFOXYD1_FULL_36_11	1798656	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.598867	35.9	-	MHLG01	30	648	548	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314757	GCA_001821375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/375/GCA_001821375.1_ASM182137v1	27774985	-
Candidatus Lloydbacteria bacterium RIFCSPHIGHO2_02_FULL_50_18	1798662	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.24811	49.2	-	MHLM01	16	1242	1177	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315367	GCA_001821395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/395/GCA_001821395.1_ASM182139v1	27774985	-
Candidatus Lloydbacteria bacterium RIFCSPHIGHO2_02_FULL_50_11	1798660	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.936139	50.1	-	MHLK01	75	991	864	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315366	GCA_001821385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/385/GCA_001821385.1_ASM182138v1	27774985	-
Candidatus Lloydbacteria bacterium RIFCSPLOWO2_01_FULL_50_20	1798665	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.992589	50.1	-	MHLP01	44	1015	962	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315095	GCA_001821435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/435/GCA_001821435.1_ASM182143v1	27774985	-
Candidatus Nealsonbacteria bacterium RBG_13_42_11	1801663	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.494071	39.3	-	MHLY01	16	540	459	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314296	GCA_001821455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/455/GCA_001821455.1_ASM182145v1	27774985	-
Candidatus Nealsonbacteria bacterium RIFCSPLOWO2_01_FULL_38_120	1801670	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.627327	38	-	MHMF01	43	649	588	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315134	GCA_001821475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/475/GCA_001821475.1_ASM182147v1	27774985	-
Candidatus Nealsonbacteria bacterium RIFCSPLOWO2_01_FULL_41_9	1801671	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.462893	40.6	-	MHMG01	47	587	431	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315161	GCA_001821485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/485/GCA_001821485.1_ASM182148v1	27774985	-
Candidatus Nealsonbacteria bacterium RIFCSPLOWO2_01_FULL_43_36	1801673	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.487726	42.5	-	MHMI01	34	584	520	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315075	GCA_001821505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/505/GCA_001821505.1_ASM182150v1	27774985	-
Candidatus Nealsonbacteria bacterium RIFCSPLOWO2_02_FULL_38_63	1801675	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.658305	38.1	-	MHMK01	36	686	621	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316073	GCA_001821535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/535/GCA_001821535.1_ASM182153v1	27774985	-
Candidatus Nealsonbacteria bacterium RIFOXYB1_FULL_40_15	1801677	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.761172	39.6	-	MHMM01	21	872	792	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314486	GCA_001821555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/555/GCA_001821555.1_ASM182155v1	27774985	-
Candidatus Nealsonbacteria bacterium RIFOXYC1_FULL_40_7	1801678	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.865908	39.5	-	MHMN01	58	995	835	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314548	GCA_001821575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/575/GCA_001821575.1_ASM182157v1	27774985	-
Candidatus Nealsonbacteria bacterium RIFOXYD1_FULL_39_11	1801679	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.826575	39.5	-	MHMO01	42	961	821	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314715	GCA_001821585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/585/GCA_001821585.1_ASM182158v1	27774985	-
Candidatus Niyogibacteria bacterium RIFCSPLOWO2_12_FULL_41_13	1801726	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.562351	40.4	-	MHMS01	26	653	592	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315890	GCA_001821615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/615/GCA_001821615.1_ASM182161v1	27774985	-
Candidatus Portnoybacteria bacterium RIFCSPHIGHO2_12_FULL_38_9	1801997	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.708366	39.6	-	MHNB01	30	757	692	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316152	GCA_001821655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/655/GCA_001821655.1_ASM182165v1	27774985	-
Candidatus Portnoybacteria bacterium RIFCSPHIGHO2_12_FULL_40_11	1801998	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.620668	37.6	-	MHNC01	57	717	552	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315642	GCA_001821675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/675/GCA_001821675.1_ASM182167v1	27774985	-
Candidatus Ryanbacteria bacterium RIFCSPLOWO2_01_FULL_47_79	1802125	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.549089	47.1	-	MHNV01	47	598	539	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315182	GCA_001821685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/685/GCA_001821685.1_ASM182168v1	27774985	-
Candidatus Ryanbacteria bacterium RIFCSPLOWO2_02_FULL_44_40	1802127	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.881079	44.1	-	MHNX01	15	912	848	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315950	GCA_001821715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/715/GCA_001821715.1_ASM182171v1	27774985	-
Candidatus Ryanbacteria bacterium RIFCSPLOWO2_02_FULL_45_11c	1802128	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.669974	44.4	-	MHNY01	55	807	623	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315952	GCA_001821725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/725/GCA_001821725.1_ASM182172v1	27774985	-
Candidatus Ryanbacteria bacterium RIFCSPLOWO2_02_FULL_47_14	1802129	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.815215	46.7	-	MHNZ01	43	896	755	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316092	GCA_001821755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/755/GCA_001821755.1_ASM182175v1	27774985	-
Candidatus Ryanbacteria bacterium RIFCSPLOWO2_12_FULL_44_26	1802130	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.890527	44.1	-	MHOA01	14	917	861	10/21/16	10/21/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04315773	GCA_001821765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/765/GCA_001821765.1_ASM182176v1	27774985	-
Candidatus Ryanbacteria bacterium RIFCSPLOWO2_12_FULL_47_9c	1802131	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.766425	46.9	-	MHOB01	56	857	726	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315848	GCA_001821795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/795/GCA_001821795.1_ASM182179v1	27774985	-
Candidatus Spechtbacteria bacterium RIFCSPHIGHO2_01_FULL_43_30	1802158	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.836748	42.5	-	MHOD01	34	806	740	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314980	GCA_001821805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/805/GCA_001821805.1_ASM182180v1	27774985	-
Candidatus Spechtbacteria bacterium RIFCSPHIGHO2_12_FULL_38_30	1802160	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.560281	37.9	-	MHOF01	22	606	553	10/21/16	10/21/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04315610	GCA_001821835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/835/GCA_001821835.1_ASM182183v1	27774985	-
Candidatus Spechtbacteria bacterium RIFCSPLOWO2_01_FULL_38_20	1802161	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.561287	37.9	-	MHOG01	40	628	538	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315153	GCA_001821845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/845/GCA_001821845.1_ASM182184v1	27774985	-
Candidatus Spechtbacteria bacterium RIFCSPLOWO2_02_FULL_38_8	1802164	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.574458	37.1	-	MHOJ01	48	640	484	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315939	GCA_001821885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/885/GCA_001821885.1_ASM182188v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFCSPHIGHO2_01_FULL_36_16	1802200	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.619117	36.1	-	MHOM01	55	718	614	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314965	GCA_001821875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/875/GCA_001821875.1_ASM182187v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFCSPHIGHO2_02_FULL_43_16	1802208	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.740502	43.2	-	MHOU01	12	837	768	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315403	GCA_001821935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/935/GCA_001821935.1_ASM182193v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFCSPHIGHO2_01_FULL_37_17	1802201	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.687235	36.9	-	MHON01	25	779	714	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314966	GCA_001821925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/925/GCA_001821925.1_ASM182192v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFCSPHIGHO2_02_FULL_34_10	1802205	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.687676	33.6	-	MHOR01	38	771	665	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315411	GCA_001821915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/915/GCA_001821915.1_ASM182191v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFCSPLOWO2_01_FULL_33_9	1802211	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.405718	33.2	-	MHOX01	38	514	394	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315057	GCA_001821945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/945/GCA_001821945.1_ASM182194v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFCSPLOWO2_01_FULL_37_25b	1802213	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.636432	37.2	-	MHOZ01	60	731	629	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315151	GCA_001821995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/995/GCA_001821995.1_ASM182199v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFCSPLOWO2_02_FULL_39_8	1802217	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.560134	38.8	-	MHPD01	43	649	501	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316075	GCA_001822005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/005/GCA_001822005.1_ASM182200v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFOXYB1_FULL_32_11	1802222	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.958831	31.9	-	MHPI01	52	1041	943	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314481	GCA_001822025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/025/GCA_001822025.1_ASM182202v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFOXYB1_FULL_37_44	1802223	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.835966	37	-	MHPJ01	26	932	869	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314479	GCA_001822065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/065/GCA_001822065.1_ASM182206v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFCSPLOWO2_12_FULL_37_15	1802218	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.609227	37	-	MHPE01	54	707	623	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315833	GCA_001822055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/055/GCA_001822055.1_ASM182205v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFOXYB1_FULL_38_37	1802224	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.762385	36.8	-	MHPK01	7	839	790	10/21/16	10/21/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04314474	GCA_001822075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/075/GCA_001822075.1_ASM182207v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFOXYC1_FULL_38_18	1802229	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.686676	38.7	-	MHPP01	32	799	723	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314522	GCA_001822095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/095/GCA_001822095.1_ASM182209v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFOXYC12_FULL_39_20	1802230	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.760812	36.8	-	MHPQ01	9	838	787	10/21/16	10/21/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04314611	GCA_001822135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/135/GCA_001822135.1_ASM182213v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFOXYD2_FULL_37_10	1802239	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.725335	36.6	-	MHPZ01	27	817	706	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314702	GCA_001822155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/155/GCA_001822155.1_ASM182215v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFOXYC2_FULL_32_10	1802231	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.940519	31.6	-	MHPR01	52	1010	905	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314584	GCA_001822145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/145/GCA_001822145.1_ASM182214v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFOXYD1_FULL_39_28	1802237	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.667828	38.8	-	MHPX01	28	766	705	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314752	GCA_001822165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/165/GCA_001822165.1_ASM182216v1	27774985	-
Candidatus Sungbacteria bacterium RIFCSPHIGHO2_01_FULL_50_25	1802265	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.57038	50.5	-	MHQD01	45	632	549	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315000	GCA_001822215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/215/GCA_001822215.1_ASM182221v1	27774985	-
Candidatus Sungbacteria bacterium RIFCSPHIGHO2_01_FULL_51_22	1802266	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.1831	51	-	MHQE01	58	1248	1138	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314829	GCA_001822225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/225/GCA_001822225.1_ASM182222v1	27774985	-
Candidatus Staskawiczbacteria bacterium RIFOXYD2_FULL_37_9	1802240	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.670257	36.6	-	MHQA01	58	772	618	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314649	GCA_001822235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/235/GCA_001822235.1_ASM182223v1	27774985	-
Candidatus Sungbacteria bacterium GWC2_49_10	1802263	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.504962	48.4	-	MHQB01	48	562	427	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314252	GCA_001822245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/245/GCA_001822245.1_ASM182224v1	27774985	-
Candidatus Sungbacteria bacterium RIFCSPHIGHO2_01_FULL_54_26	1802267	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.692645	53.7	-	MHQF01	41	780	696	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314832	GCA_001822295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/295/GCA_001822295.1_ASM182229v1	27774985	-
Candidatus Sungbacteria bacterium RIFCSPHIGHO2_02_FULL_41_12b	1802268	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.10348	40.8	-	MHQG01	74	1197	1039	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315494	GCA_001822305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/305/GCA_001822305.1_ASM182230v1	27774985	-
Candidatus Sungbacteria bacterium RIFCSPHIGHO2_02_FULL_46_12	1802269	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.02523	46.3	-	MHQH01	48	1119	974	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315510	GCA_001822325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/325/GCA_001822325.1_ASM182232v1	27774985	-
Candidatus Sungbacteria bacterium RIFCSPHIGHO2_02_FULL_47_11	1802270	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.979924	47.3	-	MHQI01	72	1061	881	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315360	GCA_001822345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/345/GCA_001822345.1_ASM182234v1	27774985	-
Candidatus Sungbacteria bacterium RIFCSPHIGHO2_02_FULL_53_17	1802275	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.73819	53.6	-	MHQN01	34	832	743	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315445	GCA_001822375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/375/GCA_001822375.1_ASM182237v1	27774985	-
Candidatus Sungbacteria bacterium RIFCSPLOWO2_01_FULL_59_16	1802280	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.800309	58.8	-	MHQS01	22	815	741	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315290	GCA_001822385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/385/GCA_001822385.1_ASM182238v1	27774985	-
Candidatus Sungbacteria bacterium RIFCSPLOWO2_02_FULL_47_9	1802282	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.03937	46.1	-	MHQU01	90	1218	954	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315957	GCA_001822415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/415/GCA_001822415.1_ASM182241v1	27774985	-
Candidatus Sungbacteria bacterium RIFCSPLOWO2_02_FULL_48_13b	1802283	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.688499	47.9	-	MHQV01	53	739	594	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315959	GCA_001822425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/425/GCA_001822425.1_ASM182242v1	27774985	-
Candidatus Sungbacteria bacterium RIFCSPLOWO2_02_FULL_54_10	1802285	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.770112	53.2	-	MHQX01	48	874	692	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316098	GCA_001822455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/455/GCA_001822455.1_ASM182245v1	27774985	-
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9	1802296	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.569732	41.8	-	MHRA01	47	669	475	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315163	GCA_001822475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/475/GCA_001822475.1_ASM182247v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_01_FULL_44_110	1802299	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.743936	44.4	-	MHRD01	10	798	741	10/21/16	10/21/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04314983	GCA_001822495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/495/GCA_001822495.1_ASM182249v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_01_FULL_43_47	1802298	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.918591	43.1	-	MHRC01	62	929	884	10/21/16	10/21/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04314896	GCA_001822505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/505/GCA_001822505.1_ASM182250v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_49_25	1802305	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.978807	49.5	-	MHRJ01	56	992	943	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313773	GCA_001822535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/535/GCA_001822535.1_ASM182253v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_FULL_43_55	1802307	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.902586	43	-	MHRL01	48	923	860	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315351	GCA_001822555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/555/GCA_001822555.1_ASM182255v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_FULL_44_12	1802308	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.456623	43.9	-	MHRM01	17	494	443	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315503	GCA_001822575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/575/GCA_001822575.1_ASM182257v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_FULL_45_28	1802310	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.645574	44.5	-	MHRO01	6	703	655	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315432	GCA_001822595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/595/GCA_001822595.1_ASM182259v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_FULL_47_18	1802313	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.667511	47.4	-	MHRR01	12	753	685	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315361	GCA_001822615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/615/GCA_001822615.1_ASM182261v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPLOWO2_01_FULL_43_83	1802317	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.905805	43	-	MHRV01	42	922	866	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315262	GCA_001822625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/625/GCA_001822625.1_ASM182262v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPLOWO2_01_FULL_45_15b	1802319	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.923489	44.8	-	MHRX01	57	968	843	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315081	GCA_001822655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/655/GCA_001822655.1_ASM182265v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPLOWO2_01_FULL_45_34b	1802320	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.777556	44.9	-	MHRY01	50	848	770	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315175	GCA_001822675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/675/GCA_001822675.1_ASM182267v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPLOWO2_02_FULL_44_35	1802327	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.583801	44.3	-	MHSF01	32	655	580	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316085	GCA_001822695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/695/GCA_001822695.1_ASM182269v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPLOWO2_12_FULL_44_15c	1802333	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.621935	44.4	-	MHSL01	36	698	623	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315791	GCA_001822705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/705/GCA_001822705.1_ASM182270v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPLOWO2_12_FULL_44_9	1802334	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.751161	44.1	-	MHSM01	48	819	731	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315792	GCA_001822735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/735/GCA_001822735.1_ASM182273v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPLOWO2_12_FULL_47_20	1802335	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.75808	47	-	MHSN01	54	758	685	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315847	GCA_001822755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/755/GCA_001822755.1_ASM182275v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPLOWO2_12_FULL_48_11	1802336	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.665768	47.4	-	MHSO01	19	755	673	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315901	GCA_001822765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/765/GCA_001822765.1_ASM182276v1	27774985	-
Candidatus Taylorbacteria bacterium RIFOXYD2_FULL_36_9	1802338	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.533453	35.7	-	MHSQ01	41	590	464	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314662	GCA_001822795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/795/GCA_001822795.1_ASM182279v1	27774985	-
Candidatus Terrybacteria bacterium RIFCSPHIGHO2_01_FULL_43_35	1802361	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.827286	43.1	-	MHSR01	25	868	795	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314981	GCA_001822815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/815/GCA_001822815.1_ASM182281v1	27774985	-
Candidatus Terrybacteria bacterium RIFCSPHIGHO2_01_FULL_48_17	1802362	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.865335	48	-	MHSS01	16	948	883	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314959	GCA_001822835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/835/GCA_001822835.1_ASM182283v1	27774985	-
Candidatus Terrybacteria bacterium RIFCSPHIGHO2_01_FULL_58_15	1802363	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.783495	58.2	-	MHST01	24	825	697	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314835	GCA_001822855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/855/GCA_001822855.1_ASM182285v1	27774985	-
Candidatus Terrybacteria bacterium RIFCSPHIGHO2_02_FULL_43_14	1802365	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.699607	43	-	MHSV01	18	733	659	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315328	GCA_001822865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/865/GCA_001822865.1_ASM182286v1	27774985	-
Candidatus Terrybacteria bacterium RIFCSPLOWO2_01_FULL_40_23	1802366	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.923479	40.1	-	MHSW01	38	996	903	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315250	GCA_001822895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/895/GCA_001822895.1_ASM182289v1	27774985	-
Candidatus Terrybacteria bacterium RIFCSPLOWO2_01_FULL_44_24	1802367	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.873695	43.1	-	MHSX01	16	908	837	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315233	GCA_001822905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/905/GCA_001822905.1_ASM182290v1	27774985	-
Candidatus Terrybacteria bacterium RIFCSPLOWO2_01_FULL_48_14	1802368	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.96666	47.9	-	MHSY01	32	1068	928	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315183	GCA_001822935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/935/GCA_001822935.1_ASM182293v1	27774985	-
Candidatus Terrybacteria bacterium RIFCSPLOWO2_02_42_20	1802370	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.468647	41.9	-	MHTA01	37	546	471	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314083	GCA_001822945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/945/GCA_001822945.1_ASM182294v1	27774985	-
Candidatus Veblenbacteria bacterium RIFOXYC1_FULL_42_9	1802427	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.596851	41.6	-	MHTD01	54	672	492	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314550	GCA_001822975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/975/GCA_001822975.1_ASM182297v1	27774985	-
Candidatus Veblenbacteria bacterium RIFOXYC2_FULL_42_11	1802428	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.791868	42.1	-	MHTE01	44	853	688	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314562	GCA_001822985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/822/985/GCA_001822985.1_ASM182298v1	27774985	-
Candidatus Veblenbacteria bacterium RIFOXYD1_FULL_43_11	1802429	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.681786	41.9	-	MHTF01	50	766	568	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314741	GCA_001823015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/015/GCA_001823015.1_ASM182301v1	27774985	-
Candidatus Vogelbacteria bacterium GWA1_51_14	1802435	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.51668	50.1	-	MHTG01	35	585	483	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314235	GCA_001823025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/025/GCA_001823025.1_ASM182302v1	27774985	-
Candidatus Vogelbacteria bacterium RIFOXYB1_FULL_42_16	1802436	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.61099	41.6	-	MHTH01	23	664	582	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314491	GCA_001823055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/055/GCA_001823055.1_ASM182305v1	27774985	-
Candidatus Vogelbacteria bacterium RIFOXYD1_FULL_44_32	1802438	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.705274	43.9	-	MHTJ01	5	748	699	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314724	GCA_001823065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/065/GCA_001823065.1_ASM182306v1	27774985	-
Candidatus Vogelbacteria bacterium RIFOXYD1_FULL_51_18	1802440	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.633812	51.7	-	MHTL01	20	701	643	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314722	GCA_001823095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/095/GCA_001823095.1_ASM182309v1	27774985	-
Candidatus Wildermuthbacteria bacterium GWA2_46_15	1802443	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.536111	46.4	-	MHTO01	29	553	482	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314238	GCA_001823105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/105/GCA_001823105.1_ASM182310v1	27774985	-
Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_01_FULL_45_20	1802444	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.708066	45	-	MHTP01	31	770	707	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314901	GCA_001823135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/135/GCA_001823135.1_ASM182313v1	27774985	-
Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_01_FULL_48_25	1802446	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.514678	48.3	-	MHTR01	23	570	518	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314995	GCA_001823155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/155/GCA_001823155.1_ASM182315v1	27774985	-
Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_01_FULL_50_47	1802449	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.667476	49.5	-	MHTU01	11	747	691	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314827	GCA_001823185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/185/GCA_001823185.1_ASM182318v1	27774985	-
Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_01_FULL_49_22b	1802448	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.584419	49.6	-	MHTT01	33	672	612	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314825	GCA_001823165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/165/GCA_001823165.1_ASM182316v1	27774985	-
Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_02_FULL_45_25	1802450	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.867755	45.1	-	MHTV01	46	931	859	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315357	GCA_001823215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/215/GCA_001823215.1_ASM182321v1	27774985	-
Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_02_FULL_47_12	1802451	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.54322	46.9	-	MHTW01	30	604	502	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315435	GCA_001823235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/235/GCA_001823235.1_ASM182323v1	27774985	-
Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_02_FULL_48_16	1802453	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.432037	47.9	-	MHTY01	31	503	431	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316156	GCA_001823255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/255/GCA_001823255.1_ASM182325v1	27774985	-
Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_02_FULL_49_12b	1802454	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.480839	48.3	-	MHTZ01	33	564	464	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316145	GCA_001823265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/265/GCA_001823265.1_ASM182326v1	27774985	-
Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_02_FULL_49_9	1802456	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.559527	49	-	MHUB01	36	666	525	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315517	GCA_001823295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/295/GCA_001823295.1_ASM182329v1	27774985	-
Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_12_FULL_40_12	1802457	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.526072	39.8	-	MHUC01	40	619	521	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315667	GCA_001823315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/315/GCA_001823315.1_ASM182331v1	27774985	-
Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_12_FULL_49_13	1802459	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.686631	49.3	-	MHUE01	19	776	691	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315561	GCA_001823335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/335/GCA_001823335.1_ASM182333v1	27774985	-
Candidatus Wildermuthbacteria bacterium RIFCSPLOWO2_01_FULL_48_29	1802462	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.477132	47.8	-	MHUH01	23	549	495	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315093	GCA_001823345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/345/GCA_001823345.1_ASM182334v1	27774985	-
Candidatus Wildermuthbacteria bacterium RIFCSPLOWO2_01_FULL_48_35	1802463	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.748778	47.4	-	MHUI01	43	818	743	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315185	GCA_001823375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/375/GCA_001823375.1_ASM182337v1	27774985	-
Candidatus Wildermuthbacteria bacterium RIFCSPLOWO2_01_FULL_50_46	1802464	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.699533	49.5	-	MHUJ01	17	792	720	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315281	GCA_001823385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/385/GCA_001823385.1_ASM182338v1	27774985	-
Candidatus Wildermuthbacteria bacterium RIFCSPLOWO2_02_FULL_47_10	1802465	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.747816	47	-	MHUK01	42	828	634	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316026	GCA_001823415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/415/GCA_001823415.1_ASM182341v1	27774985	-
Candidatus Wildermuthbacteria bacterium RIFCSPLOWO2_02_FULL_47_9c	1802466	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.793492	48.5	-	MHUL01	53	951	705	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316118	GCA_001823425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/425/GCA_001823425.1_ASM182342v1	27774985	-
Candidatus Wildermuthbacteria bacterium RIFCSPLOWO2_12_FULL_40_9	1802467	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.436432	40.2	-	MHUM01	37	506	430	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315889	GCA_001823455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/455/GCA_001823455.1_ASM182345v1	27774985	-
Candidatus Wildermuthbacteria bacterium RIFCSPLOWO2_12_FULL_49_9	1802468	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.565445	49.3	-	MHUN01	36	660	576	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315798	GCA_001823475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/475/GCA_001823475.1_ASM182347v1	27774985	-
Candidatus Yonathbacteria bacterium RIFCSPHIGHO2_01_FULL_51_10	1802723	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.759654	50.9	-	MHUS01	45	858	719	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314828	GCA_001823505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/505/GCA_001823505.1_ASM182350v1	27774985	-
Candidatus Yonathbacteria bacterium RIFCSPHIGHO2_01_FULL_44_41	1802722	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.776001	44.2	-	MHUR01	18	808	756	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314900	GCA_001823495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/495/GCA_001823495.1_ASM182349v1	27774985	-
Candidatus Yonathbacteria bacterium RIFCSPLOWO2_01_FULL_43_27	1802726	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.740909	43.1	-	MHUV01	7	765	708	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315260	GCA_001823545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/545/GCA_001823545.1_ASM182354v1	27774985	-
Candidatus Yonathbacteria bacterium RIFCSPHIGHO2_02_FULL_44_14	1802724	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.75744	44.2	-	MHUT01	22	802	741	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315504	GCA_001823535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/535/GCA_001823535.1_ASM182353v1	27774985	-
Candidatus Yonathbacteria bacterium RIFCSPLOWO2_01_FULL_47_33b	1802727	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.718629	46.7	-	MHUW01	22	834	771	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315090	GCA_001823575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/575/GCA_001823575.1_ASM182357v1	27774985	-
Candidatus Yonathbacteria bacterium RIFOXYC1_FULL_52_10	1802728	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.765817	51.5	-	MHUX01	47	851	729	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314529	GCA_001823595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/595/GCA_001823595.1_ASM182359v1	27774985	-
Candidatus Yonathbacteria bacterium RIFOXYD1_FULL_52_36	1802730	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.80757	51.6	-	MHUZ01	39	861	781	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314744	GCA_001823605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/605/GCA_001823605.1_ASM182360v1	27774985	-
Candidatus Zambryskibacteria bacterium GWB1_40_5	1802731	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.58225	39.3	-	MHVA01	46	659	543	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314244	GCA_001823625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/625/GCA_001823625.1_ASM182362v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_01_FULL_35_32	1802732	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.481577	34.7	-	MHVB01	33	536	473	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314879	GCA_001823655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/655/GCA_001823655.1_ASM182365v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_01_FULL_39_63	1802733	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.795387	38.7	-	MHVC01	17	908	846	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314797	GCA_001823665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/665/GCA_001823665.1_ASM182366v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_01_FULL_43_25	1802734	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.603298	43.6	-	MHVD01	23	686	624	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314806	GCA_001823695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/695/GCA_001823695.1_ASM182369v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_01_FULL_43_60	1802736	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.599392	42.9	-	MHVF01	15	698	645	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314982	GCA_001823715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/715/GCA_001823715.1_ASM182371v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_01_FULL_49_18	1802740	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.582828	48.6	-	MHVJ01	15	683	623	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314911	GCA_001823735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/735/GCA_001823735.1_ASM182373v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_02_FULL_39_16	1802745	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.46452	38.6	-	MHVO01	29	549	474	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315415	GCA_001823745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/745/GCA_001823745.1_ASM182374v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_02_FULL_39_82	1802747	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.544004	38.8	-	MHVQ01	49	602	549	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315416	GCA_001823775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/775/GCA_001823775.1_ASM182377v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_02_FULL_43_37	1802749	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.494507	51.4	-	MHVS01	5	600	538	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315502	GCA_001823795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/795/GCA_001823795.1_ASM182379v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_12_FULL_38_37	1802751	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.702639	38.7	-	MHVU01	50	753	691	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315584	GCA_001823815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/815/GCA_001823815.1_ASM182381v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_12_FULL_39_21	1802752	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.795918	38.8	-	MHVV01	18	895	837	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315672	GCA_001823825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/825/GCA_001823825.1_ASM182382v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_12_FULL_39_47	1802753	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.468809	39.1	-	MHVW01	30	503	469	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315611	GCA_001823845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/845/GCA_001823845.1_ASM182384v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_12_FULL_43_12b	1802754	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.58828	42.9	-	MHVX01	30	654	561	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315645	GCA_001823875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/875/GCA_001823875.1_ASM182387v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_12_FULL_44_12b	1802755	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.663776	43.6	-	MHVY01	26	736	644	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315646	GCA_001823895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/895/GCA_001823895.1_ASM182389v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_12_FULL_48_10	1802756	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.447	47.7	-	MHVZ01	34	552	454	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315741	GCA_001823915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/915/GCA_001823915.1_ASM182391v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_01_FULL_39_39	1802758	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.800216	38.8	-	MHWB01	13	900	846	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315249	GCA_001823925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/925/GCA_001823925.1_ASM182392v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_01_FULL_42_41	1802759	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.641781	42.9	-	MHWC01	15	738	677	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315256	GCA_001823945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/945/GCA_001823945.1_ASM182394v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_01_FULL_43_17	1802760	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.611623	42.9	-	MHWD01	28	673	596	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315073	GCA_001823975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/975/GCA_001823975.1_ASM182397v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_01_FULL_45_21	1802761	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.717313	44	-	MHWE01	25	798	726	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315267	GCA_001823995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/823/995/GCA_001823995.1_ASM182399v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_01_FULL_47_33	1802764	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.554924	46.3	-	MHWH01	30	648	571	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315275	GCA_001824025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/025/GCA_001824025.1_ASM182402v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_01_FULL_47_14	1802763	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.622703	47.7	-	MHWG01	23	744	633	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315179	GCA_001824005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/005/GCA_001824005.1_ASM182400v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_01_FULL_48_25	1802765	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.535626	47.6	-	MHWI01	5	651	601	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315184	GCA_001824055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/055/GCA_001824055.1_ASM182405v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_01_FULL_52_12	1802766	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.464326	51.3	-	MHWJ01	13	571	480	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315097	GCA_001824075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/075/GCA_001824075.1_ASM182407v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_02_39_10	1802767	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.690768	38.9	-	MHWK01	35	787	710	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313785	GCA_001824095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/095/GCA_001824095.1_ASM182409v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_02_FULL_38_13	1802768	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.586381	38.4	-	MHWL01	31	656	558	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316007	GCA_001824105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/105/GCA_001824105.1_ASM182410v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_02_FULL_39_14	1802769	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.484814	38.8	-	MHWM01	32	565	485	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316074	GCA_001824135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/135/GCA_001824135.1_ASM182413v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_02_FULL_39_69	1802771	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.597447	38.8	-	MHWO01	40	665	609	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316009	GCA_001824155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/155/GCA_001824155.1_ASM182415v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_02_FULL_44_12b	1802772	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.484884	43.3	-	MHWP01	30	600	511	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315948	GCA_001824175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/175/GCA_001824175.1_ASM182417v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_12_39_8	1802774	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.640077	38.4	-	MHWR01	55	741	653	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313970	GCA_001824195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/195/GCA_001824195.1_ASM182419v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_12_FULL_39_16	1802775	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.539271	38.6	-	MHWS01	26	601	526	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315834	GCA_001824215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/215/GCA_001824215.1_ASM182421v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_12_FULL_39_23	1802776	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.610899	39.2	-	MHWT01	29	663	601	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315887	GCA_001824235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/235/GCA_001824235.1_ASM182423v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_02_FULL_51_21	1802773	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.48273	51.5	-	MHWQ01	2	587	534	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316097	GCA_001824255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/255/GCA_001824255.1_ASM182425v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFOXYC1_FULL_39_10	1802779	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.744429	38.4	-	MHWW01	25	865	797	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314552	GCA_001824275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/275/GCA_001824275.1_ASM182427v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFOXYD1_FULL_40_13	1802781	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.728731	39.7	-	MHWY01	10	778	722	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314719	GCA_001824295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/295/GCA_001824295.1_ASM182429v1	27774985	-
Parcubacteria group bacterium RIFCSPHIGHO2_01_FULL_40_30	1817736	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.534146	40	-	MHXA01	32	606	538	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314887	GCA_001824315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/315/GCA_001824315.1_ASM182431v1	27774985	-
Parcubacteria group bacterium RIFCSPHIGHO2_01_FULL_47_10b	1817738	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.01232	47	-	MHXC01	66	1135	945	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314819	GCA_001824325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/325/GCA_001824325.1_ASM182432v1	27774985	-
Parcubacteria group bacterium RIFCSPHIGHO2_01_FULL_56_18	1817739	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.977414	55.6	-	MHXD01	49	1050	941	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315007	GCA_001824355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/355/GCA_001824355.1_ASM182435v1	27774985	-
Parcubacteria group bacterium RIFCSPHIGHO2_02_FULL_40_12	1817740	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.478164	39.4	-	MHXE01	23	549	477	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315493	GCA_001824375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/375/GCA_001824375.1_ASM182437v1	27774985	-
Parcubacteria group bacterium RIFCSPHIGHO2_02_FULL_48_10b	1817741	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.30006	47.7	-	MHXF01	81	1343	1127	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316155	GCA_001824395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/395/GCA_001824395.1_ASM182439v1	27774985	-
Parcubacteria group bacterium RIFCSPLOWO2_01_FULL_40_65	1817742	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.430757	39.4	-	MHXG01	23	483	427	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315066	GCA_001824405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/405/GCA_001824405.1_ASM182440v1	27774985	-
Parcubacteria group bacterium RIFCSPLOWO2_01_FULL_48_18	1817743	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.21011	48.1	-	MHXH01	29	1163	1089	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315092	GCA_001824435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/435/GCA_001824435.1_ASM182443v1	27774985	-
Desulfuromonadaceae bacterium GWB2_53_15	1801895	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.83073	52.7	-	MHXL01	189	1764	1401	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313900	GCA_001824455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/455/GCA_001824455.1_ASM182445v1	27774985	-
Planctomycetes bacterium GWA2_39_15	1801947	PRJNA288027	288027	PVC group	Planctomycetes	2.41891	38.6	-	MHXP01	231	2354	2073	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313930	GCA_001824485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/485/GCA_001824485.1_ASM182448v1	27774985	-
Planctomycetes bacterium GWA2_40_7	1801948	PRJNA288027	288027	PVC group	Planctomycetes	0.99636	39.5	-	MHXQ01	119	978	703	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313929	GCA_001824505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/505/GCA_001824505.1_ASM182450v1	27774985	-
Planctomycetes bacterium GWA2_50_13	1801949	PRJNA288027	288027	PVC group	Planctomycetes	1.71792	49.6	-	MHXR01	72	1662	1352	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314181	GCA_001824525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/525/GCA_001824525.1_ASM182452v1	27774985	-
Planctomycetes bacterium GWC2_45_44	1801952	PRJNA288027	288027	PVC group	Planctomycetes	2.93399	44.9	-	MHXU01	180	2633	2469	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313934	GCA_001824555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/555/GCA_001824555.1_ASM182455v1	27774985	-
Planctomycetes bacterium GWC2_49_10	1801953	PRJNA288027	288027	PVC group	Planctomycetes	0.723253	44.6	-	MHXV01	99	819	352	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314299	GCA_001824565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/565/GCA_001824565.1_ASM182456v1	27774985	-
Planctomycetes bacterium GWE2_41_14	1801954	PRJNA288027	288027	PVC group	Planctomycetes	1.16869	40.8	-	MHXW01	130	1189	941	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314215	GCA_001824595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/595/GCA_001824595.1_ASM182459v1	27774985	-
Planctomycetes bacterium GWF2_40_8	1801956	PRJNA288027	288027	PVC group	Planctomycetes	1.35122	39	-	MHXY01	135	1341	1036	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314227	GCA_001824605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/605/GCA_001824605.1_ASM182460v1	27774985	-
Planctomycetes bacterium GWF2_50_10	1801959	PRJNA288027	288027	PVC group	Planctomycetes	2.62145	49.2	-	MHYB01	118	2400	2044	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313928	GCA_001824635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/635/GCA_001824635.1_ASM182463v1	27774985	-
Planctomycetes bacterium RBG_13_46_10	1801961	PRJNA288027	288027	PVC group	Planctomycetes	1.93236	43.8	-	MHYD01	93	1861	1376	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314288	GCA_001824645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/645/GCA_001824645.1_ASM182464v1	27774985	-
Planctomycetes bacterium RBG_13_50_24	1801962	PRJNA288027	288027	PVC group	Planctomycetes	2.34225	49.7	-	MHYE01	198	1925	1700	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314289	GCA_001824675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/675/GCA_001824675.1_ASM182467v1	27774985	-
Planctomycetes bacterium RBG_13_60_9	1801963	PRJNA288027	288027	PVC group	Planctomycetes	3.27891	58.2	-	MHYF01	270	3191	2007	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313997	GCA_001824685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/685/GCA_001824685.1_ASM182468v1	27774985	-
Candidatus Terrybacteria bacterium RIFCSPHIGHO2_02_41_19	1802364	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.456892	41	-	MHSU01	42	533	459	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313780	GCA_001824715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/715/GCA_001824715.1_ASM182471v1	27774985	-
Candidatus Taylorbacteria bacterium RIFCSPLOWO2_12_FULL_49_67	1802337	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.948629	49.5	-	MHSP01	56	950	891	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315849	GCA_001824735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/735/GCA_001824735.1_ASM182473v1	27774985	-
Candidatus Terrybacteria bacterium RIFCSPLOWO2_01_FULL_58_14	1802369	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.81427	57.7	-	MHSZ01	34	867	671	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315144	GCA_001824745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/745/GCA_001824745.1_ASM182474v1	27774985	-
Candidatus Veblenbacteria bacterium RIFOXYA2_FULL_43_9	1802425	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.764778	42.1	-	MHTB01	57	843	668	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314347	GCA_001824755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/755/GCA_001824755.1_ASM182475v1	27774985	-
Candidatus Veblenbacteria bacterium RIFOXYB1_FULL_43_13	1802426	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.664186	41.8	-	MHTC01	53	744	597	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314509	GCA_001824795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/795/GCA_001824795.1_ASM182479v1	27774985	-
Candidatus Vogelbacteria bacterium RIFOXYD1_FULL_42_15	1802437	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.459373	41.9	-	MHTI01	40	496	401	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314760	GCA_001824815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/815/GCA_001824815.1_ASM182481v1	27774985	-
Candidatus Vogelbacteria bacterium RIFOXYD1_FULL_46_19	1802439	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.707755	45.2	-	MHTK01	8	763	704	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314742	GCA_001824825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/825/GCA_001824825.1_ASM182482v1	27774985	-
Candidatus Vogelbacteria bacterium RIFOXYD2_FULL_44_9	1802441	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.550022	43.1	-	MHTM01	50	625	439	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314709	GCA_001824845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/845/GCA_001824845.1_ASM182484v1	27774985	-
Candidatus Wildermuthbacteria bacterium GWA1_49_26	1802442	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.670286	49.4	-	MHTN01	12	746	686	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314230	GCA_001824875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/875/GCA_001824875.1_ASM182487v1	27774985	-
Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_01_FULL_47_27	1802445	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.648542	47.4	-	MHTQ01	41	705	618	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314820	GCA_001824885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/885/GCA_001824885.1_ASM182488v1	27774985	-
Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_01_FULL_48_27b	1802447	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.507888	47.6	-	MHTS01	28	596	531	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314996	GCA_001824915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/915/GCA_001824915.1_ASM182491v1	27774985	-
Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_02_FULL_47_17	1802452	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.915055	47.2	-	MHTX01	51	963	864	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315512	GCA_001824925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/925/GCA_001824925.1_ASM182492v1	27774985	-
Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_02_FULL_49_17	1802455	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.677744	49.4	-	MHUA01	10	755	690	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315516	GCA_001824955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/955/GCA_001824955.1_ASM182495v1	27774985	-
Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_12_FULL_45_9	1802458	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.706676	44.7	-	MHUD01	64	789	629	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315560	GCA_001824975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/975/GCA_001824975.1_ASM182497v1	27774985	-
Candidatus Wildermuthbacteria bacterium RIFCSPLOWO2_01_FULL_47_18	1802460	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.528552	47.5	-	MHUF01	35	609	531	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315180	GCA_001824985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/985/GCA_001824985.1_ASM182498v1	27774985	-
Candidatus Wildermuthbacteria bacterium RIFCSPLOWO2_01_FULL_48_16	1802461	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.60976	48.3	-	MHUG01	24	701	610	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315277	GCA_001825005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/005/GCA_001825005.1_ASM182500v1	27774985	-
Candidatus Wildermuthbacteria bacterium RIFOXYD1_FULL_50_12	1802469	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.676968	49.5	-	MHUO01	9	756	683	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314717	GCA_001825035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/035/GCA_001825035.1_ASM182503v1	27774985	-
Candidatus Yonathbacteria bacterium RBG_16_43_6	1802720	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.520259	41.7	-	MHUP01	44	604	381	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313717	GCA_001825055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/055/GCA_001825055.1_ASM182505v1	27774985	-
Candidatus Yonathbacteria bacterium RIFCSPHIGHO2_01_FULL_44_19	1802721	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.51282	43.2	-	MHUQ01	7	544	507	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314811	GCA_001825065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/065/GCA_001825065.1_ASM182506v1	27774985	-
Candidatus Yonathbacteria bacterium RIFCSPLOWO2_01_FULL_43_20	1802725	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.775023	44.2	-	MHUU01	19	822	768	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315259	GCA_001825075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/075/GCA_001825075.1_ASM182507v1	27774985	-
Candidatus Yonathbacteria bacterium RIFOXYC2_FULL_47_9	1802729	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.827676	45.8	-	MHUY01	40	927	751	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314602	GCA_001825115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/115/GCA_001825115.1_ASM182511v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_01_FULL_44_22b	1802737	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.411872	44	-	MHVG01	26	506	457	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314985	GCA_001825145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/145/GCA_001825145.1_ASM182514v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_01_FULL_43_27	1802735	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.571018	43	-	MHVE01	28	615	558	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314894	GCA_001825135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/135/GCA_001825135.1_ASM182513v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_01_FULL_46_25	1802738	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.581808	47.3	-	MHVH01	7	696	644	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314991	GCA_001825155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/155/GCA_001825155.1_ASM182515v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_01_FULL_46_30	1802739	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.501181	46.1	-	MHVI01	34	590	520	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314818	GCA_001825195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/195/GCA_001825195.1_ASM182519v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_01_FULL_52_18	1802741	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.463895	51.5	-	MHVK01	1	566	518	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314876	GCA_001825215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/215/GCA_001825215.1_ASM182521v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_02_38_10.5	1802742	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.672473	38.7	-	MHVL01	46	771	697	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313779	GCA_001825235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/235/GCA_001825235.1_ASM182523v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_02_39_10	1802743	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.555587	39.1	-	MHVM01	44	614	544	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313772	GCA_001825245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/245/GCA_001825245.1_ASM182524v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_02_FULL_38_22	1802744	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.472733	38.3	-	MHVN01	42	538	459	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315490	GCA_001825255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/255/GCA_001825255.1_ASM182525v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_02_FULL_39_19	1802746	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.806462	38.8	-	MHVP01	14	906	852	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315341	GCA_001825295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/295/GCA_001825295.1_ASM182529v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_12_FULL_38_34	1802750	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.479148	38.2	-	MHVT01	30	536	469	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315555	GCA_001825325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/325/GCA_001825325.1_ASM182532v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_02_FULL_43_14	1802748	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.617965	42.7	-	MHVR01	23	715	642	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315423	GCA_001825315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/315/GCA_001825315.1_ASM182531v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_01_FULL_35_19	1802757	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.510477	35	-	MHWA01	20	566	511	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315243	GCA_001825335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/335/GCA_001825335.1_ASM182533v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_01_FULL_45_43	1802762	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.502727	44.7	-	MHWF01	38	614	542	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315269	GCA_001825365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/365/GCA_001825365.1_ASM182536v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_12_FULL_39_45	1802777	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.628166	38.7	-	MHWU01	41	706	644	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315835	GCA_001825405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/405/GCA_001825405.1_ASM182540v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_02_FULL_39_26	1802770	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.611437	39.2	-	MHWN01	28	657	597	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315940	GCA_001825395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/395/GCA_001825395.1_ASM182539v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_12_FULL_45_14	1802778	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.428737	44.2	-	MHWV01	31	517	462	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315793	GCA_001825415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/415/GCA_001825415.1_ASM182541v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFOXYD1_FULL_39_35	1802780	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.733524	38.5	-	MHWX01	19	838	787	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314758	GCA_001825445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/445/GCA_001825445.1_ASM182544v1	27774985	-
Parcubacteria group bacterium RIFCSPHIGHO2_01_FULL_45_26	1817737	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.575582	45.5	-	MHXB01	39	651	590	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314902	GCA_001825485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/485/GCA_001825485.1_ASM182548v1	27774985	-
Candidatus Zambryskibacteria bacterium RIFOXYD2_FULL_43_10	1802782	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.467686	42	-	MHWZ01	39	581	423	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314697	GCA_001825475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/475/GCA_001825475.1_ASM182547v1	27774985	-
Parcubacteria group bacterium RIFCSPLOWO2_02_FULL_40_12	1817744	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.545562	39.8	-	MHXI01	24	609	538	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316010	GCA_001825495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/495/GCA_001825495.1_ASM182549v1	27774985	-
Parcubacteria group bacterium RIFCSPLOWO2_12_FULL_40_10	1817745	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.450395	39.5	-	MHXJ01	17	507	456	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315784	GCA_001825525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/525/GCA_001825525.1_ASM182552v1	27774985	-
Parcubacteria group bacterium RIFOXYD2_FULL_52_8	1817746	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.721447	52.2	-	MHXK01	65	832	600	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314663	GCA_001825555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/555/GCA_001825555.1_ASM182555v1	27774985	-
Desulfuromonadaceae bacterium GWC2_58_13	1801896	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	3.16391	57.7	-	MHXM01	193	2955	2567	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313905	GCA_001825565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/565/GCA_001825565.1_ASM182556v1	27774985	-
Planctomycetes bacterium GWB2_41_19	1801950	PRJNA288027	288027	PVC group	Planctomycetes	1.56231	41.1	-	MHXS01	195	1576	1328	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314190	GCA_001825595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/595/GCA_001825595.1_ASM182559v1	27774985	-
Planctomycetes bacterium GWC2_39_26	1801951	PRJNA288027	288027	PVC group	Planctomycetes	1.43437	38.6	-	MHXT01	151	1373	1230	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313932	GCA_001825635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/635/GCA_001825635.1_ASM182563v1	27774985	-
Planctomycetes bacterium GWF2_39_10	1801955	PRJNA288027	288027	PVC group	Planctomycetes	1.65035	38.1	-	MHXX01	175	1639	1334	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314220	GCA_001825655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/655/GCA_001825655.1_ASM182565v1	27774985	-
Planctomycetes bacterium GWF2_41_51	1801957	PRJNA288027	288027	PVC group	Planctomycetes	4.82711	41	-	MHXZ01	138	4114	3949	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313931	GCA_001825665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/665/GCA_001825665.1_ASM182566v1	27774985	-
Planctomycetes bacterium GWF2_42_9	1801958	PRJNA288027	288027	PVC group	Planctomycetes	4.86081	41.9	-	MHYA01	214	4170	3663	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313933	GCA_001825675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/675/GCA_001825675.1_ASM182567v1	27774985	-
Planctomycetes bacterium RBG_13_44_8b	1801960	PRJNA288027	288027	PVC group	Planctomycetes	2.46662	42.9	-	MHYC01	117	2441	1624	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314294	GCA_001825715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/715/GCA_001825715.1_ASM182571v1	27774985	-
Planctomycetes bacterium RBG_13_62_9	1801964	PRJNA288027	288027	PVC group	Planctomycetes	4.17454	59.8	-	MHYG01	295	3718	2223	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313998	GCA_001828245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/245/GCA_001828245.1_ASM182824v1	27774985	-
Planctomycetes bacterium RBG_13_63_9	1801965	PRJNA288027	288027	PVC group	Planctomycetes	4.89347	61.1	-	MHYH01	398	4217	2625	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313691	GCA_001828265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/265/GCA_001828265.1_ASM182826v1	27774985	-
Planctomycetes bacterium RBG_16_41_13	1801966	PRJNA288027	288027	PVC group	Planctomycetes	2.58845	39.8	-	MHYI01	314	2510	1867	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313738	GCA_001828295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/295/GCA_001828295.1_ASM182829v1	27774985	-
Planctomycetes bacterium RBG_16_64_10	1801970	PRJNA288027	288027	PVC group	Planctomycetes	4.22131	61.8	-	MHYM01	382	3750	2120	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313752	GCA_001828305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/305/GCA_001828305.1_ASM182830v1	27774985	-
Planctomycetes bacterium RBG_16_64_12	1801971	PRJNA288027	288027	PVC group	Planctomycetes	6.1847	62.9	-	MHYN01	457	5318	3548	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313719	GCA_001828335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/335/GCA_001828335.1_ASM182833v1	27774985	-
Planctomycetes bacterium RBG_19FT_COMBO_48_8	1801972	PRJNA288027	288027	PVC group	Planctomycetes	2.50814	47.3	-	MHYO01	296	2536	1415	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314059	GCA_001828345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/345/GCA_001828345.1_ASM182834v1	27774985	-
Planctomycetes bacterium RIFCSPHIGHO2_02_FULL_38_41	1801973	PRJNA288027	288027	PVC group	Planctomycetes	1.46243	37.6	-	MHYP01	299	1459	1203	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316161	GCA_001828365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/365/GCA_001828365.1_ASM182836v1	27774985	-
Planctomycetes bacterium RIFCSPHIGHO2_02_FULL_50_42	1801975	PRJNA288027	288027	PVC group	Planctomycetes	1.80115	50.3	-	MHYR01	134	1714	1570	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315391	GCA_001828385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/385/GCA_001828385.1_ASM182838v1	27774985	-
Planctomycetes bacterium RIFCSPHIGHO2_02_FULL_52_58	1801976	PRJNA288027	288027	PVC group	Planctomycetes	1.24958	52.1	-	MHYS01	135	1268	1117	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315542	GCA_001828415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/415/GCA_001828415.1_ASM182841v1	27774985	-
Planctomycetes bacterium RBG_16_43_13	1801967	PRJNA288027	288027	PVC group	Planctomycetes	2.01914	42.6	-	MHYJ01	165	2105	1686	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313744	GCA_001828445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/445/GCA_001828445.1_ASM182844v1	27774985	-
Planctomycetes bacterium RIFCSPHIGHO2_12_39_6	1801977	PRJNA288027	288027	PVC group	Planctomycetes	2.5022	38.1	-	MHYT01	1122	2587	1829	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314078	GCA_001828435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/435/GCA_001828435.1_ASM182843v1	27774985	-
Planctomycetes bacterium RBG_16_55_9	1801968	PRJNA288027	288027	PVC group	Planctomycetes	5.14248	53.7	-	MHYK01	393	4944	3070	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314046	GCA_001828465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/465/GCA_001828465.1_ASM182846v1	27774985	-
Planctomycetes bacterium RBG_16_59_8	1801969	PRJNA288027	288027	PVC group	Planctomycetes	2.25242	58.1	-	MHYL01	213	2425	1401	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314055	GCA_001828495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/495/GCA_001828495.1_ASM182849v1	27774985	-
Planctomycetes bacterium RIFCSPHIGHO2_02_FULL_40_12	1801974	PRJNA288027	288027	PVC group	Planctomycetes	2.36437	39.6	-	MHYQ01	158	2267	1949	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315466	GCA_001828515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/515/GCA_001828515.1_ASM182851v1	27774985	-
Planctomycetes bacterium RIFCSPHIGHO2_12_FULL_52_36	1801980	PRJNA288027	288027	PVC group	Planctomycetes	1.49547	52.3	-	MHYW01	143	1509	1327	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315572	GCA_001828545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/545/GCA_001828545.1_ASM182854v1	27774985	-
Planctomycetes bacterium RIFCSPLOWO2_02_FULL_50_16	1801981	PRJNA288027	288027	PVC group	Planctomycetes	2.21613	50.1	-	MHYX01	56	2091	1949	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316047	GCA_001828565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/565/GCA_001828565.1_ASM182856v1	27774985	-
Planctomycetes bacterium RIFCSPHIGHO2_12_42_15	1801978	PRJNA288027	288027	PVC group	Planctomycetes	1.59421	40.4	-	MHYU01	901	1598	1045	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314079	GCA_001828535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/535/GCA_001828535.1_ASM182853v1	27774985	-
Planctomycetes bacterium RIFCSPLOWO2_12_FULL_40_19	1801983	PRJNA288027	288027	PVC group	Planctomycetes	2.1202	39.9	-	MHZA01	174	2045	1868	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315911	GCA_001828595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/595/GCA_001828595.1_ASM182859v1	27774985	-
Planctomycetes bacterium RIFCSPLOWO2_12_FULL_50_35	1801984	PRJNA288027	288027	PVC group	Planctomycetes	1.99135	50.2	-	MHZB01	122	1892	1750	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315805	GCA_001828605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/605/GCA_001828605.1_ASM182860v1	27774985	-
Planctomycetes bacterium RIFOXYC2_FULL_41_27	1801986	PRJNA288027	288027	PVC group	Planctomycetes	1.54535	40.7	-	MHZD01	279	1545	1252	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316180	GCA_001828645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/645/GCA_001828645.1_ASM182864v1	27774985	-
Planctomycetes bacterium RIFOXYB12_FULL_42_10	1801985	PRJNA288027	288027	PVC group	Planctomycetes	2.2108	38	-	MHZC01	1236	1804	1003	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316213	GCA_001828635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/635/GCA_001828635.1_ASM182863v1	27774985	-
Planctomycetes bacterium RIFOXYD2_FULL_41_16	1801988	PRJNA288027	288027	PVC group	Planctomycetes	1.81918	40.1	-	MHZF01	173	1851	1344	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314698	GCA_001828685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/685/GCA_001828685.1_ASM182868v1	27774985	-
Planctomycetes bacterium RIFOXYD12_FULL_42_12	1801987	PRJNA288027	288027	PVC group	Planctomycetes	2.02238	36.1	-	MHZE01	1002	1609	828	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316239	GCA_001828665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/665/GCA_001828665.1_ASM182866v1	27774985	-
Pseudomonadales bacterium GWC1_66_9	1817753	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	2.79325	64.7	-	MHZH01	316	2755	1863	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314123	GCA_001828715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/715/GCA_001828715.1_ASM182871v1	27774985	-
Pseudomonadales bacterium RIFCSPHIGHO2_01_FULL_64_12	1802004	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	4.16509	63.9	-	MHZJ01	175	3999	3427	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315036	GCA_001828735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/735/GCA_001828735.1_ASM182873v1	27774985	-
Pseudomonadales bacterium RIFCSPHIGHO2_02_FULL_60_43	1802005	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	4.3944	60	-	MHZK01	428	4121	3898	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316159	GCA_001828745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/745/GCA_001828745.1_ASM182874v1	27774985	-
Pseudomonadales bacterium RIFCSPHIGHO2_12_FULL_40_16	1802006	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	3.47493	41.4	-	MHZL01	124	3332	3149	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315751	GCA_001828765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/765/GCA_001828765.1_ASM182876v1	27774985	-
Pseudomonadales bacterium RIFCSPLOWO2_12_60_38	1802010	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	6.16123	60.1	-	MHZO01	49	5565	5448	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313800	GCA_001828795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/795/GCA_001828795.1_ASM182879v1	27774985	-
Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450	1802008	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	6.16138	60.1	-	MHZP01	192	5575	5412	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315860	GCA_001828815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/815/GCA_001828815.1_ASM182881v1	27774985	-
Rhodobacteraceae bacterium GWF1_65_7	1802013	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	4.1269	63.8	-	MHZS01	209	4147	3501	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313890	GCA_001828845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/845/GCA_001828845.1_ASM182884v1	27774985	-
Rhodobacteraceae bacterium GWE1_64_9	1802012	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	3.89462	63.7	-	MHZR01	279	3992	3221	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314213	GCA_001828835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/835/GCA_001828835.1_ASM182883v1	27774985	-
Rhodobacterales bacterium RIFCSPHIGHO2_02_FULL_62_130	1802014	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	4.97022	62.1	-	MHZT01	53	4754	4632	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315469	GCA_001828855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/855/GCA_001828855.1_ASM182885v1	27774985	-
Rhodobacterales bacterium RIFCSPHIGHO2_12_FULL_62_75	1802015	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	4.97207	62.1	-	MHZU01	53	4753	4627	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315600	GCA_001828895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/895/GCA_001828895.1_ASM182889v1	27774985	-
Rhodocyclales bacterium GWA2_65_19	1802016	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	4.24977	63.4	-	MHZV01	151	3996	3740	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314161	GCA_001828915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/915/GCA_001828915.1_ASM182891v1	27774985	-
Rhodocyclales bacterium GWA2_65_20	1802017	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	3.60661	64.5	-	MHZW01	248	3560	3135	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314166	GCA_001828925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/925/GCA_001828925.1_ASM182892v1	27774985	-
Rhodocyclales bacterium RIFCSPLOWO2_02_FULL_63_24	1802018	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	4.31511	63.2	-	MHZX01	147	4102	3903	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315981	GCA_001828935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/935/GCA_001828935.1_ASM182893v1	27774985	-
Rhodospirillales bacterium RIFCSPLOWO2_01_FULL_65_14	1802020	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	1.35901	62.2	-	MHZZ01	275	1389	748	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315315	GCA_001828995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/995/GCA_001828995.1_ASM182899v1	27774985	-
Sphingobacteriia bacterium RIFOXYC2_FULL_35_18	1802166	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.30371	35.9	-	MIAG01	13	2970	2906	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314593	GCA_001829005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/005/GCA_001829005.1_ASM182900v1	27774985	-
Sphingobacteriia bacterium RIFOXYD2_FULL_35_12	1802167	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	3.30477	35.9	-	MIAH01	24	2978	2857	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314699	GCA_001829035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/035/GCA_001829035.1_ASM182903v1	27774985	-
Sphingomonadales bacterium GWF1_63_6	1802168	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	3.34597	61.5	-	MIAI01	304	3371	2450	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314216	GCA_001829045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/045/GCA_001829045.1_ASM182904v1	27774985	-
Sphingomonadales bacterium RIFCSPHIGHO2_01_FULL_65_20	1802169	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	4.24203	64.8	-	MIAJ01	48	4035	3909	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314945	GCA_001829075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/075/GCA_001829075.1_ASM182907v1	27774985	-
Sphingomonadales bacterium RIFCSPLOWO2_12_FULL_63_15	1802170	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	3.88141	63.2	-	MIAK01	73	3650	3487	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315913	GCA_001829085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/085/GCA_001829085.1_ASM182908v1	27774985	-
Spirochaetes bacterium GWB1_27_13	1802173	PRJNA288027	288027	Spirochaetes	unclassified Spirochaetes	4.40062	26.8	-	MIAN01	273	3754	3454	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314119	GCA_001829125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/125/GCA_001829125.1_ASM182912v1	27774985	-
Spirochaetes bacterium GWB1_36_13	1802174	PRJNA288027	288027	Spirochaetes	unclassified Spirochaetes	3.04188	36.1	-	MIAO01	151	2881	2753	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313962	GCA_001829155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/155/GCA_001829155.1_ASM182915v1	27774985	-
Spirochaetes bacterium GWB1_59_5	1802176	PRJNA288027	288027	Spirochaetes	unclassified Spirochaetes	4.9593	58.2	-	MIAQ01	373	5344	4234	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313959	GCA_001829165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/165/GCA_001829165.1_ASM182916v1	27774985	-
Spirochaetes bacterium GWB1_60_80	1802177	PRJNA288027	288027	Spirochaetes	unclassified Spirochaetes	3.60165	60.5	-	MIAR01	59	3001	2927	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313958	GCA_001829185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/185/GCA_001829185.1_ASM182918v1	27774985	-
Spirochaetes bacterium GWB1_66_5	1802178	PRJNA288027	288027	Spirochaetes	unclassified Spirochaetes	2.71206	65.3	-	MIAS01	295	2919	1884	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314185	GCA_001829215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/215/GCA_001829215.1_ASM182921v1	27774985	-
Spirochaetes bacterium GWC1_27_15	1802179	PRJNA288027	288027	Spirochaetes	unclassified Spirochaetes	4.46974	26.9	-	MIAT01	279	3795	3462	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313955	GCA_001829235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/235/GCA_001829235.1_ASM182923v1	27774985	-
Spirochaetes bacterium GWC1_61_12	1802180	PRJNA288027	288027	Spirochaetes	unclassified Spirochaetes	3.4807	60.4	-	MIAU01	113	2986	2727	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314125	GCA_001829245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/245/GCA_001829245.1_ASM182924v1	27774985	-
Spirochaetes bacterium GWC2_52_13	1802181	PRJNA288027	288027	Spirochaetes	unclassified Spirochaetes	2.9794	52.1	-	MIAV01	79	2817	2633	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313952	GCA_001829255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/255/GCA_001829255.1_ASM182925v1	27774985	-
Spirochaetes bacterium GWD1_61_31	1802183	PRJNA288027	288027	Spirochaetes	unclassified Spirochaetes	3.59493	60.5	-	MIAX01	138	2976	2893	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314208	GCA_001829295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/295/GCA_001829295.1_ASM182929v1	27774985	-
Spirochaetes bacterium GWE1_32_154	1802184	PRJNA288027	288027	Spirochaetes	unclassified Spirochaetes	4.02905	31.5	-	MIAY01	43	3426	3352	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313951	GCA_001829315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/315/GCA_001829315.1_ASM182931v1	27774985	-
Spirochaetes bacterium GWE2_31_10	1802186	PRJNA288027	288027	Spirochaetes	unclassified Spirochaetes	4.11947	31.5	-	MIBA01	113	3544	3334	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313950	GCA_001829335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/335/GCA_001829335.1_ASM182933v1	27774985	-
Spirochaetes bacterium GWF1_31_7	1802187	PRJNA288027	288027	Spirochaetes	unclassified Spirochaetes	4.10079	31.5	-	MIBB01	89	3529	3358	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314136	GCA_001829345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/345/GCA_001829345.1_ASM182934v1	27774985	-
Spirochaetes bacterium GWF1_41_5	1802188	PRJNA288027	288027	Spirochaetes	unclassified Spirochaetes	4.20212	41.2	-	MIBC01	400	3581	2756	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314217	GCA_001829375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/375/GCA_001829375.1_ASM182937v1	27774985	-
Spirochaetes bacterium GWF1_49_6	1802189	PRJNA288027	288027	Spirochaetes	unclassified Spirochaetes	2.52609	48.5	-	MIBD01	199	2586	1812	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314135	GCA_001829395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/395/GCA_001829395.1_ASM182939v1	27774985	-
Spirochaetes bacterium GWF2_52_7	1802192	PRJNA288027	288027	Spirochaetes	unclassified Spirochaetes	1.47477	50.6	-	MIBG01	168	1532	990	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314222	GCA_001829425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/425/GCA_001829425.1_ASM182942v1	27774985	-
Spirochaetes bacterium GWF1_51_8	1802190	PRJNA288027	288027	Spirochaetes	unclassified Spirochaetes	3.54304	50.8	-	MIBE01	77	3357	3176	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313954	GCA_001829415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/415/GCA_001829415.1_ASM182941v1	27774985	-
Spirochaetes bacterium RBG_13_51_14	1802193	PRJNA288027	288027	Spirochaetes	unclassified Spirochaetes	3.56319	51.1	-	MIBH01	84	3252	2923	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314297	GCA_001829455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/455/GCA_001829455.1_ASM182945v1	27774985	-
Spirochaetes bacterium RBG_13_68_11	1802194	PRJNA288027	288027	Spirochaetes	unclassified Spirochaetes	3.28978	65.6	-	MIBI01	209	3382	2271	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314298	GCA_001829475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/475/GCA_001829475.1_ASM182947v1	27774985	-
Spirochaetes bacterium RBG_16_49_21	1802195	PRJNA288027	288027	Spirochaetes	unclassified Spirochaetes	3.79882	50.3	-	MIBJ01	83	3535	3413	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313740	GCA_001829495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/495/GCA_001829495.1_ASM182949v1	27774985	-
Spirochaetes bacterium RBG_16_67_19	1802196	PRJNA288027	288027	Spirochaetes	unclassified Spirochaetes	3.80175	65.6	-	MIBK01	245	3904	2855	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313720	GCA_001829505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/505/GCA_001829505.1_ASM182950v1	27774985	-
Spirochaetes bacterium RIFOXYB1_FULL_32_8	1802197	PRJNA288027	288027	Spirochaetes	unclassified Spirochaetes	3.88725	31.3	-	MIBL01	625	3551	2747	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314476	GCA_001829535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/535/GCA_001829535.1_ASM182953v1	27774985	-
Syntrophobacterales bacterium GWF2_56_9	1802288	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.01958	55.3	-	MICK01	171	2122	1569	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313916	GCA_001829835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/835/GCA_001829835.1_ASM182983v1	27774985	-
Syntrophobacterales bacterium RBG_19FT_COMBO_59_10	1802289	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.8253	55.2	-	MICL01	180	1964	1088	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314064	GCA_001829855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/855/GCA_001829855.1_ASM182985v1	27774985	-
Syntrophus sp. GWC2_56_31	1802291	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.0586	55.7	-	MICN01	136	2033	1894	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313913	GCA_001829875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/875/GCA_001829875.1_ASM182987v1	27774985	-
Candidatus Blackburnbacteria bacterium RIFCSPHIGHO2_01_FULL_40_17	1797512	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.956702	39.4	-	MHBV01	27	1014	952	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314847	GCA_001816375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/375/GCA_001816375.1_ASM181637v1	-	-
Candidatus Blackburnbacteria bacterium RIFCSPHIGHO2_01_FULL_43_15b	1797513	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.904792	43	-	MHBW01	35	956	887	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314935	GCA_001816385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/385/GCA_001816385.1_ASM181638v1	27774985	-
Candidatus Blackburnbacteria bacterium RIFCSPHIGHO2_02_FULL_39_13	1797515	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.953848	39.4	-	MHBY01	34	1028	935	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315477	GCA_001816405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/405/GCA_001816405.1_ASM181640v1	27774985	-
Candidatus Blackburnbacteria bacterium RIFCSPHIGHO2_02_FULL_44_20	1797516	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.843579	44.2	-	MHBZ01	40	969	880	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315479	GCA_001816425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/425/GCA_001816425.1_ASM181642v1	27774985	-
Candidatus Blackburnbacteria bacterium RIFCSPHIGHO2_12_FULL_44_25	1797518	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.840956	44.1	-	MHCB01	39	946	872	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315569	GCA_001816455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/455/GCA_001816455.1_ASM181645v1	27774985	-
Candidatus Blackburnbacteria bacterium RIFCSPLOWO2_01_FULL_41_27	1797520	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.656666	40.8	-	MHCD01	51	749	678	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315211	GCA_001816485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/485/GCA_001816485.1_ASM181648v1	27774985	-
Candidatus Blackburnbacteria bacterium RIFCSPLOWO2_01_FULL_40_20	1797519	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.958425	39.6	-	MHCC01	27	1034	967	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315230	GCA_001816475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/475/GCA_001816475.1_ASM181647v1	27774985	-
Candidatus Blackburnbacteria bacterium RIFCSPLOWO2_01_FULL_44_43	1797521	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.616691	44.4	-	MHCE01	41	725	656	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315215	GCA_001816495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/495/GCA_001816495.1_ASM181649v1	27774985	-
Candidatus Blackburnbacteria bacterium RIFCSPLOWO2_02_FULL_40_10	1797522	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.576616	39.7	-	MHCF01	29	660	577	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316040	GCA_001816535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/535/GCA_001816535.1_ASM181653v1	27774985	-
Candidatus Blackburnbacteria bacterium RIFCSPLOWO2_02_FULL_44_9	1797523	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.69768	43.5	-	MHCG01	52	815	646	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315976	GCA_001816555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/555/GCA_001816555.1_ASM181655v1	27774985	-
Candidatus Chisholmbacteria bacterium RIFCSPHIGHO2_01_FULL_48_12	1797589	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.901658	47.7	-	MHCH01	65	1048	898	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314937	GCA_001816575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/575/GCA_001816575.1_ASM181657v1	27774985	-
Candidatus Chisholmbacteria bacterium RIFCSPHIGHO2_01_FULL_52_32	1797591	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.25464	49.8	-	MHCJ01	8	1260	1204	10/21/16	10/21/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04314939	GCA_001816585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/585/GCA_001816585.1_ASM181658v1	27774985	-
Candidatus Chisholmbacteria bacterium RIFCSPHIGHO2_12_FULL_49_9	1797592	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.398327	48.5	-	MHCK01	49	452	313	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315656	GCA_001816605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/605/GCA_001816605.1_ASM181660v1	27774985	-
Candidatus Woykebacteria bacterium GWA1_44_8	1802591	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.832262	43.5	-	MHCN01	20	912	788	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314234	GCA_001816635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/635/GCA_001816635.1_ASM181663v1	27774985	-
Candidatus Woykebacteria bacterium RBG_13_40_15	1802593	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.982788	40.7	-	MHCP01	36	1084	961	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314293	GCA_001816655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/655/GCA_001816655.1_ASM181665v1	27774985	-
Candidatus Woykebacteria bacterium GWB1_45_5	1802592	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.882399	43.3	-	MHCO01	55	999	816	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314247	GCA_001816645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/645/GCA_001816645.1_ASM181664v1	27774985	-
Candidatus Woykebacteria bacterium RBG_16_39_9b	1802595	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.594602	38.5	-	MHCR01	31	717	538	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314255	GCA_001816695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/695/GCA_001816695.1_ASM181669v1	27774985	-
Candidatus Woykebacteria bacterium RIFCSPHIGHO2_01_FULL_39_12	1802599	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.486575	39.1	-	MHCV01	47	584	484	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315017	GCA_001816735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/735/GCA_001816735.1_ASM181673v1	27774985	-
Candidatus Woykebacteria bacterium RBG_16_44_10	1802597	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.506143	43.2	-	MHCT01	31	616	528	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314045	GCA_001816725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/725/GCA_001816725.1_ASM181672v1	27774985	-
Candidatus Woykebacteria bacterium RBG_16_43_9	1802596	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.853956	42	-	MHCS01	57	991	749	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314032	GCA_001816715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/715/GCA_001816715.1_ASM181671v1	27774985	-
Candidatus Woykebacteria bacterium RIFCSPHIGHO2_01_FULL_43_29	1802600	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.486352	43.1	-	MHCW01	49	551	486	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314955	GCA_001816775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/775/GCA_001816775.1_ASM181677v1	27774985	-
Candidatus Woykebacteria bacterium RIFCSPHIGHO2_02_FULL_43_16b	1802601	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.816703	42.7	-	MHCX01	55	910	794	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316138	GCA_001816795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/795/GCA_001816795.1_ASM181679v1	27774985	-
Candidatus Woykebacteria bacterium RIFCSPLOWO2_01_FULL_41_12	1802604	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.545154	40.3	-	MHDA01	54	647	458	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315210	GCA_001816825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/825/GCA_001816825.1_ASM181682v1	27774985	-
Candidatus Woykebacteria bacterium RIFCSPHIGHO2_12_FULL_43_10	1802602	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.716521	42.5	-	MHCY01	59	814	652	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315685	GCA_001816815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/815/GCA_001816815.1_ASM181681v1	27774985	-
Candidatus Woykebacteria bacterium RIFCSPLOWO2_01_FULL_43_14	1802605	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.806729	42.8	-	MHDB01	44	903	797	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315214	GCA_001816835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/835/GCA_001816835.1_ASM181683v1	27774985	-
Candidatus Blackburnbacteria bacterium RIFCSPHIGHO2_01_FULL_44_64	1797514	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.54677	44.5	-	MHBX01	41	643	575	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314853	GCA_001816875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/875/GCA_001816875.1_ASM181687v1	27774985	-
Candidatus Blackburnbacteria bacterium RIFCSPHIGHO2_12_FULL_41_13b	1797517	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.820764	40.8	-	MHCA01	60	928	764	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315749	GCA_001816895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/895/GCA_001816895.1_ASM181689v1	27774985	-
Candidatus Chisholmbacteria bacterium RIFCSPHIGHO2_01_FULL_49_18	1797590	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.828447	49	-	MHCI01	20	879	845	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314938	GCA_001816905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/905/GCA_001816905.1_ASM181690v1	27774985	-
Candidatus Chisholmbacteria bacterium RIFCSPLOWO2_01_FULL_49_14	1797593	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.21186	49	-	MHCL01	29	1321	1201	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315218	GCA_001816915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/915/GCA_001816915.1_ASM181691v1	27774985	-
Candidatus Chisholmbacteria bacterium RIFCSPLOWO2_01_FULL_50_28	1797594	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.21408	49.8	-	MHCM01	3	1232	1176	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315053	GCA_001816955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/955/GCA_001816955.1_ASM181695v1	27774985	-
Candidatus Woykebacteria bacterium RBG_13_40_7b	1802594	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.827425	38.7	-	MHCQ01	50	993	626	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313978	GCA_001816975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/975/GCA_001816975.1_ASM181697v1	27774985	-
Candidatus Woykebacteria bacterium RIFCSPHIGHO2_12_FULL_45_10	1802603	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.613186	44.5	-	MHCZ01	46	711	584	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315687	GCA_001816985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/985/GCA_001816985.1_ASM181698v1	27774985	-
Candidatus Woykebacteria bacterium RBG_19FT_COMBO_43_10	1802598	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.823188	42.4	-	MHCU01	73	1023	725	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314063	GCA_001816995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/995/GCA_001816995.1_ASM181699v1	27774985	-
Candidatus Andersenbacteria bacterium RIFCSPHIGHO2_01_FULL_46_36	1797278	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.778473	45.6	-	MHHO01	13	828	777	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314958	GCA_001817035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/035/GCA_001817035.1_ASM181703v1	27774985	-
Candidatus Andersenbacteria bacterium RIFCSPHIGHO2_02_FULL_45_11	1797279	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.884266	45.3	-	MHHP01	40	983	860	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315355	GCA_001817055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/055/GCA_001817055.1_ASM181705v1	27774985	-
Candidatus Andersenbacteria bacterium RIFCSPHIGHO2_02_FULL_46_16	1797280	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.36217	45.5	-	MHHQ01	32	1310	1235	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315329	GCA_001817065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/065/GCA_001817065.1_ASM181706v1	27774985	-
Candidatus Andersenbacteria bacterium RIFCSPHIGHO2_12_FULL_45_11	1797281	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.970698	45.1	-	MHHR01	33	1063	950	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315552	GCA_001817095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/095/GCA_001817095.1_ASM181709v1	27774985	-
Candidatus Andersenbacteria bacterium RIFCSPHIGHO2_12_FULL_45_11b	1797282	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.88387	45.3	-	MHHS01	51	972	849	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315588	GCA_001817115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/115/GCA_001817115.1_ASM181711v1	27774985	-
Candidatus Andersenbacteria bacterium RIFCSPHIGHO2_12_FULL_46_9	1797283	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.15125	45.2	-	MHHT01	78	1177	980	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315589	GCA_001817135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/135/GCA_001817135.1_ASM181713v1	27774985	-
Candidatus Andersenbacteria bacterium RIFCSPLOWO2_02_FULL_46_11	1797284	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.17363	45.3	-	MHHU01	46	1168	1040	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315996	GCA_001817145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/145/GCA_001817145.1_ASM181714v1	27774985	-
Candidatus Andersenbacteria bacterium RIFCSPLOWO2_12_FULL_45_8	1797285	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.00265	45.3	-	MHHV01	91	1025	904	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315845	GCA_001817175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/175/GCA_001817175.1_ASM181717v1	27774985	-
Candidatus Brennerbacteria bacterium RIFOXYB1_FULL_41_13	1797527	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.628883	40.8	-	MHHW01	17	751	667	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314512	GCA_001817195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/195/GCA_001817195.1_ASM181719v1	27774985	-
Candidatus Brennerbacteria bacterium RIFOXYC1_FULL_41_11	1797528	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.608236	40.9	-	MHHX01	22	714	645	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314539	GCA_001817215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/215/GCA_001817215.1_ASM181721v1	27774985	-
Candidatus Brennerbacteria bacterium RIFOXYD1_FULL_41_16	1797529	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.655033	40.9	-	MHHY01	13	762	690	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314723	GCA_001817235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/235/GCA_001817235.1_ASM181723v1	27774985	-
Candidatus Buchananbacteria bacterium RBG_13_36_9	1797530	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.05316	35.6	-	MHHZ01	24	1122	879	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314003	GCA_001817255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/255/GCA_001817255.1_ASM181725v1	27774985	-
Candidatus Buchananbacteria bacterium RBG_13_39_9	1797531	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.879605	38.3	-	MHIA01	34	893	700	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313988	GCA_001817265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/265/GCA_001817265.1_ASM181726v1	27774985	-
Candidatus Buchananbacteria bacterium RIFCSPHIGHO2_01_FULL_39_14	1797532	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.18498	38.9	-	MHIB01	50	1230	1119	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314882	GCA_001817295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/295/GCA_001817295.1_ASM181729v1	27774985	-
Candidatus Buchananbacteria bacterium RIFCSPHIGHO2_01_FULL_39_8	1797533	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.83498	39.1	-	MHIC01	54	876	716	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314884	GCA_001817305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/305/GCA_001817305.1_ASM181730v1	27774985	-
Candidatus Buchananbacteria bacterium RIFCSPHIGHO2_01_FULL_44_11	1797535	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.943148	44.1	-	MHIE01	30	950	884	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314897	GCA_001817345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/345/GCA_001817345.1_ASM181734v1	27774985	-
Candidatus Buchananbacteria bacterium RIFCSPHIGHO2_01_FULL_40_35	1797534	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.712325	39.9	-	MHID01	26	746	686	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314973	GCA_001817335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/335/GCA_001817335.1_ASM181733v1	27774985	-
Candidatus Buchananbacteria bacterium RIFCSPHIGHO2_01_FULL_46_12	1797536	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.984154	45.4	-	MHIF01	73	1003	857	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314816	GCA_001817375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/375/GCA_001817375.1_ASM181737v1	27774985	-
Candidatus Buchananbacteria bacterium RIFCSPHIGHO2_01_FULL_47_11b	1797537	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.569135	47.3	-	MHIG01	35	604	510	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314993	GCA_001817385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/385/GCA_001817385.1_ASM181738v1	27774985	-
Candidatus Buchananbacteria bacterium RIFCSPHIGHO2_02_FULL_38_8	1797538	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.773774	38.1	-	MHIH01	71	849	681	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316150	GCA_001817415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/415/GCA_001817415.1_ASM181741v1	27774985	-
Candidatus Buchananbacteria bacterium RIFCSPHIGHO2_02_FULL_39_17	1797539	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.14134	38.9	-	MHII01	38	1179	1096	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315492	GCA_001817425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/425/GCA_001817425.1_ASM181742v1	27774985	-
Candidatus Buchananbacteria bacterium RIFCSPHIGHO2_02_FULL_40_13	1797540	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.965996	39.5	-	MHIJ01	37	999	897	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315342	GCA_001817455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/455/GCA_001817455.1_ASM181745v1	27774985	-
Candidatus Buchananbacteria bacterium RIFCSPHIGHO2_02_FULL_45_11b	1797541	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.908187	44.5	-	MHIK01	73	967	786	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316153	GCA_001817465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/465/GCA_001817465.1_ASM181746v1	27774985	-
Candidatus Buchananbacteria bacterium RIFCSPHIGHO2_02_FULL_56_16	1797542	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.05612	55.5	-	MHIL01	39	1031	927	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316147	GCA_001817495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/495/GCA_001817495.1_ASM181749v1	27774985	-
Candidatus Buchananbacteria bacterium RIFCSPLOWO2_01_FULL_39_33	1797543	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.97317	39.5	-	MHIM01	41	991	913	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315155	GCA_001817505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/505/GCA_001817505.1_ASM181750v1	27774985	-
Candidatus Buchananbacteria bacterium RIFCSPLOWO2_01_FULL_40_23b	1797544	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.1842	39.9	-	MHIN01	53	1251	1154	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315065	GCA_001817535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/535/GCA_001817535.1_ASM181753v1	27774985	-
Candidatus Buchananbacteria bacterium RIFCSPLOWO2_01_FULL_45_31	1797545	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.690127	44.8	-	MHIO01	44	723	652	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315268	GCA_001817545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/545/GCA_001817545.1_ASM181754v1	27774985	-
Candidatus Buchananbacteria bacterium RIFCSPLOWO2_01_FULL_46_12	1797546	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.77139	45.5	-	MHIP01	55	802	648	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315177	GCA_001817575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/575/GCA_001817575.1_ASM181757v1	27774985	-
Candidatus Buchananbacteria bacterium RIFCSPLOWO2_01_FULL_56_15	1797547	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.613013	55.3	-	MHIQ01	34	643	503	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315104	GCA_001817585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/585/GCA_001817585.1_ASM181758v1	27774985	-
Candidatus Buchananbacteria bacterium RIFCSPLOWO2_02_FULL_46_11b	1797548	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.02853	45.3	-	MHIR01	73	1068	857	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315955	GCA_001817615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/615/GCA_001817615.1_ASM181761v1	27774985	-
Candidatus Colwellbacteria bacterium GWA2_46_10	1797684	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.507262	45.8	-	MHIS01	21	630	515	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314240	GCA_001817635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/635/GCA_001817635.1_ASM181763v1	27774985	-
Candidatus Colwellbacteria bacterium RBG_13_48_8	1797685	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.373847	45.8	-	MHIT01	32	466	247	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314005	GCA_001817655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/655/GCA_001817655.1_ASM181765v1	27774985	-
Candidatus Colwellbacteria bacterium RIFCSPHIGHO2_02_FULL_43_15	1797686	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.475445	42.7	-	MHIU01	46	553	403	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315500	GCA_001817675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/675/GCA_001817675.1_ASM181767v1	27774985	-
Candidatus Colwellbacteria bacterium RIFCSPHIGHO2_02_FULL_45_17	1797687	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.461877	45.3	-	MHIV01	38	540	460	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315356	GCA_001817685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/685/GCA_001817685.1_ASM181768v1	27774985	-
Candidatus Colwellbacteria bacterium RIFCSPHIGHO2_12_FULL_43_12	1797688	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.439691	41.9	-	MHIW01	38	520	349	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315613	GCA_001817715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/715/GCA_001817715.1_ASM181771v1	27774985	-
Candidatus Colwellbacteria bacterium RIFCSPHIGHO2_12_FULL_44_17	1797689	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.578317	44	-	MHIX01	45	649	547	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315676	GCA_001817735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/735/GCA_001817735.1_ASM181773v1	27774985	-
Candidatus Colwellbacteria bacterium RIFCSPLOWO2_01_FULL_48_10	1797690	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.745897	48.2	-	MHIY01	34	820	676	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315276	GCA_001817755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/755/GCA_001817755.1_ASM181775v1	27774985	-
Candidatus Colwellbacteria bacterium RIFCSPLOWO2_02_FULL_44_20b	1797691	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.589157	44.2	-	MHIZ01	38	653	562	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316019	GCA_001817765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/765/GCA_001817765.1_ASM181776v1	27774985	-
Candidatus Colwellbacteria bacterium RIFCSPLOWO2_02_FULL_45_11	1797692	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.531354	45.2	-	MHJA01	32	628	496	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316021	GCA_001817795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/795/GCA_001817795.1_ASM181779v1	27774985	-
Candidatus Colwellbacteria bacterium RIFCSPLOWO2_12_FULL_43_11	1797693	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.498071	42.6	-	MHJB01	41	576	449	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315787	GCA_001817805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/805/GCA_001817805.1_ASM181780v1	27774985	-
Candidatus Colwellbacteria bacterium RIFCSPLOWO2_12_FULL_44_13	1797694	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.469551	43.7	-	MHJC01	29	531	444	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315894	GCA_001817835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/835/GCA_001817835.1_ASM181783v1	27774985	-
Candidatus Colwellbacteria bacterium RIFCSPLOWO2_12_FULL_46_17	1797695	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.507188	45.5	-	MHJD01	37	577	515	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315846	GCA_001817845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/845/GCA_001817845.1_ASM181784v1	27774985	-
Candidatus Harrisonbacteria bacterium RIFCSPHIGHO2_01_FULL_44_13	1798402	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.667198	43.5	-	MHJE01	44	750	645	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314898	GCA_001817875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/875/GCA_001817875.1_ASM181787v1	27774985	-
Candidatus Harrisonbacteria bacterium RIFCSPLOWO2_01_FULL_40_28	1798406	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.486892	40	-	MHJI01	31	532	477	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315157	GCA_001817925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/925/GCA_001817925.1_ASM181792v1	27774985	-
Candidatus Harrisonbacteria bacterium RIFCSPHIGHO2_12_FULL_48_16	1798405	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.458099	47.5	-	MHJH01	41	543	444	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315616	GCA_001817935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/935/GCA_001817935.1_ASM181793v1	27774985	-
Candidatus Harrisonbacteria bacterium RIFCSPLOWO2_01_FULL_44_18	1798407	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.752398	43.5	-	MHJJ01	14	816	748	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315169	GCA_001817915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/915/GCA_001817915.1_ASM181791v1	27774985	-
Candidatus Harrisonbacteria bacterium RIFCSPLOWO2_02_FULL_41_11	1798408	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.79076	40.9	-	MHJK01	39	904	790	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316077	GCA_001817975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/975/GCA_001817975.1_ASM181797v1	27774985	-
Candidatus Harrisonbacteria bacterium RIFCSPLOWO2_02_FULL_41_13b	1798409	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.839317	40	-	MHJL01	38	931	789	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316012	GCA_001817995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/995/GCA_001817995.1_ASM181799v1	27774985	-
Candidatus Harrisonbacteria bacterium RIFOXYA1_FULL_48_8	1798411	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.388131	46.5	-	MHJN01	41	470	322	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314335	GCA_001818005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/005/GCA_001818005.1_ASM181800v1	27774985	-
Candidatus Harrisonbacteria bacterium RIFOXYD1_FULL_40_9	1798412	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.541659	39.6	-	MHJO01	37	630	465	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314739	GCA_001818015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/015/GCA_001818015.1_ASM181801v1	27774985	-
Candidatus Jacksonbacteria bacterium RIFCSPHIGHO2_02_FULL_43_10	1798455	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.762241	43	-	MHJP01	39	771	660	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315347	GCA_001818055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/055/GCA_001818055.1_ASM181805v1	27774985	-
Candidatus Jacksonbacteria bacterium RIFCSPHIGHO2_02_FULL_44_25	1798456	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.918784	44	-	MHJQ01	60	956	852	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315353	GCA_001818075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/075/GCA_001818075.1_ASM181807v1	27774985	-
Candidatus Jacksonbacteria bacterium RIFCSPHIGHO2_12_FULL_44_12	1798457	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.889526	43.1	-	MHJR01	65	968	759	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315558	GCA_001818085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/085/GCA_001818085.1_ASM181808v1	27774985	-
Candidatus Jacksonbacteria bacterium RIFCSPLOWO2_01_FULL_44_13	1798458	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.969913	43.4	-	MHJS01	26	929	832	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315139	GCA_001818105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/105/GCA_001818105.1_ASM181810v1	27774985	-
Candidatus Jacksonbacteria bacterium RIFCSPLOWO2_02_FULL_43_9	1798459	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.802204	43	-	MHJT01	65	810	611	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315947	GCA_001818135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/135/GCA_001818135.1_ASM181813v1	27774985	-
Candidatus Jacksonbacteria bacterium RIFCSPLOWO2_02_FULL_44_20	1798460	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.07273	43.8	-	MHJU01	41	1099	993	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315949	GCA_001818155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/155/GCA_001818155.1_ASM181815v1	27774985	-
Candidatus Jacksonbacteria bacterium RIFCSPLOWO2_12_FULL_44_15b	1798461	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.05422	43.8	-	MHJV01	43	1077	950	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315895	GCA_001818175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/175/GCA_001818175.1_ASM181817v1	27774985	-
Candidatus Jacksonbacteria bacterium RIFOXYA2_FULL_43_12	1798462	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.313	43.2	-	MHJW01	48	1283	1172	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314361	GCA_001818185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/185/GCA_001818185.1_ASM181818v1	27774985	-
Candidatus Jacksonbacteria bacterium RIFOXYA2_FULL_44_7	1798463	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.773242	43.2	-	MHJX01	74	862	621	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314370	GCA_001818205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/205/GCA_001818205.1_ASM181820v1	27774985	-
Candidatus Jacksonbacteria bacterium RIFOXYB2_FULL_44_15	1798464	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.25363	43.2	-	MHJY01	54	1245	1141	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314416	GCA_001818235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/235/GCA_001818235.1_ASM181823v1	27774985	-
Candidatus Jacksonbacteria bacterium RIFOXYC2_FULL_44_29	1798465	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.22831	43.7	-	MHJZ01	62	1192	1095	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314566	GCA_001818255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/255/GCA_001818255.1_ASM181825v1	27774985	-
Candidatus Jacksonbacteria bacterium RIFOXYD2_FULL_43_21	1798466	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.37111	43.4	-	MHKA01	60	1313	1210	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314703	GCA_001818275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/275/GCA_001818275.1_ASM181827v1	27774985	-
Candidatus Kerfeldbacteria bacterium RIFCSPLOWO2_01_FULL_48_11	1798543	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.2047	48.2	-	MHKE01	20	1177	1038	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315051	GCA_001818285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/285/GCA_001818285.1_ASM181828v1	27774985	-
Candidatus Kerfeldbacteria bacterium RIFCSPLOWO2_02_FULL_42_19	1798544	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.16339	42.7	-	MHKF01	18	1140	1073	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316079	GCA_001818315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/315/GCA_001818315.1_ASM181831v1	27774985	-
Candidatus Kerfeldbacteria bacterium RIFCSPLOWO2_12_FULL_43_9	1798545	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.07436	42.7	-	MHKG01	32	1061	973	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315789	GCA_001818335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/335/GCA_001818335.1_ASM181833v1	27774985	-
Candidatus Kerfeldbacteria bacterium RIFOXYC2_FULL_38_9	1798548	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.10862	37.8	-	MHKJ01	67	1134	901	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314579	GCA_001818355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/355/GCA_001818355.1_ASM181835v1	27774985	-
Candidatus Komeilibacteria bacterium RIFCSPHIGHO2_01_FULL_52_14	1798549	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.860072	52	-	MHKK01	62	894	757	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314830	GCA_001818365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/365/GCA_001818365.1_ASM181836v1	27774985	-
Candidatus Komeilibacteria bacterium RIFCSPLOWO2_01_FULL_52_15	1798551	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.869668	52	-	MHKM01	50	912	753	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315283	GCA_001818395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/395/GCA_001818395.1_ASM181839v1	27774985	-
Candidatus Komeilibacteria bacterium RIFCSPLOWO2_01_FULL_53_11	1798552	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.73139	52.5	-	MHKN01	59	795	646	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315284	GCA_001818415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/415/GCA_001818415.1_ASM181841v1	27774985	-
Candidatus Komeilibacteria bacterium RIFCSPLOWO2_02_FULL_48_11	1798553	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.08736	47	-	MHKO01	59	1156	981	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315958	GCA_001818435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/435/GCA_001818435.1_ASM181843v1	27774985	-
Candidatus Komeilibacteria bacterium RIFOXYC1_FULL_37_11	1798555	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.904089	36.5	-	MHKQ01	26	921	837	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314527	GCA_001818445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/445/GCA_001818445.1_ASM181844v1	27774985	-
Candidatus Komeilibacteria bacterium RIFOXYC2_FULL_45_12	1798556	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.959512	45	-	MHKR01	47	948	806	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316183	GCA_001818475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/475/GCA_001818475.1_ASM181847v1	27774985	-
Candidatus Komeilibacteria bacterium RIFOXYD1_FULL_37_29	1798557	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.89934	36.7	-	MHKS01	5	907	856	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314764	GCA_001818495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/495/GCA_001818495.1_ASM181849v1	27774985	-
Candidatus Liptonbacteria bacterium GWB1_49_6	1798644	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.53603	50.2	-	MHKU01	41	628	493	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314243	GCA_001818515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/515/GCA_001818515.1_ASM181851v1	27774985	-
Candidatus Liptonbacteria bacterium RIFCSPHIGHO2_01_FULL_56_18b	1798646	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.558618	55.7	-	MHKW01	29	610	545	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314834	GCA_001818545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/545/GCA_001818545.1_ASM181854v1	27774985	-
Candidatus Liptonbacteria bacterium GWC1_60_9	1798645	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.549543	57.9	-	MHKV01	46	646	461	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314249	GCA_001818535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/535/GCA_001818535.1_ASM181853v1	27774985	-
Candidatus Liptonbacteria bacterium RIFCSPHIGHO2_01_FULL_57_28	1798647	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.553409	58.5	-	MHKX01	33	625	559	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315008	GCA_001818575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/575/GCA_001818575.1_ASM181857v1	27774985	-
Candidatus Liptonbacteria bacterium RIFCSPHIGHO2_12_FULL_60_13	1798648	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.494941	59.5	-	MHKY01	47	575	446	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315562	GCA_001818595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/595/GCA_001818595.1_ASM181859v1	27774985	-
Candidatus Liptonbacteria bacterium RIFCSPLOWO2_01_FULL_45_15	1798649	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.670991	44.4	-	MHKZ01	54	774	646	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315266	GCA_001818615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/615/GCA_001818615.1_ASM181861v1	27774985	-
Candidatus Liptonbacteria bacterium RIFCSPLOWO2_01_FULL_52_25	1798650	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.07235	52.1	-	MHLA01	25	1117	1041	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315098	GCA_001818625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/625/GCA_001818625.1_ASM181862v1	27774985	-
Candidatus Liptonbacteria bacterium RIFCSPLOWO2_01_FULL_56_20	1798652	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.648384	55.6	-	MHLC01	30	719	633	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315196	GCA_001818655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/655/GCA_001818655.1_ASM181865v1	27774985	-
Candidatus Harrisonbacteria bacterium RIFCSPHIGHO2_02_FULL_40_20	1798403	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.667488	40.1	-	MHJF01	35	736	653	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316141	GCA_001818675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/675/GCA_001818675.1_ASM181867v1	27774985	-
Candidatus Harrisonbacteria bacterium RIFCSPHIGHO2_02_FULL_42_16	1798404	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.754398	41	-	MHJG01	25	853	778	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315345	GCA_001818695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/695/GCA_001818695.1_ASM181869v1	27774985	-
Candidatus Harrisonbacteria bacterium RIFCSPLOWO2_02_FULL_45_10c	1798410	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.546056	44.6	-	MHJM01	35	625	469	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315951	GCA_001818705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/705/GCA_001818705.1_ASM181870v1	27774985	-
Candidatus Kerfeldbacteria bacterium RIFCSPHIGHO2_02_FULL_42_14	1798540	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.12871	42.7	-	MHKB01	16	1097	1024	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315327	GCA_001818735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/735/GCA_001818735.1_ASM181873v1	27774985	-
Candidatus Kerfeldbacteria bacterium RIFCSPHIGHO2_12_FULL_42_13	1798541	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.14178	42.6	-	MHKC01	25	1118	1047	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315612	GCA_001818755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/755/GCA_001818755.1_ASM181875v1	27774985	-
Candidatus Kerfeldbacteria bacterium RIFCSPHIGHO2_12_FULL_48_17	1798542	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.21874	48	-	MHKD01	45	1181	1069	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315742	GCA_001818775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/775/GCA_001818775.1_ASM181877v1	27774985	-
Candidatus Kerfeldbacteria bacterium RIFOXYA2_FULL_38_24	1798546	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.16591	38	-	MHKH01	35	1139	1066	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314354	GCA_001818785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/785/GCA_001818785.1_ASM181878v1	27774985	-
Candidatus Kerfeldbacteria bacterium RIFOXYB2_FULL_38_14	1798547	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.21859	38.3	-	MHKI01	30	1177	1105	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314440	GCA_001818815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/815/GCA_001818815.1_ASM181881v1	27774985	-
Candidatus Komeilibacteria bacterium RIFCSPLOWO2_01_FULL_45_10	1798550	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.59448	44.9	-	MHKL01	45	679	498	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315080	GCA_001818835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/835/GCA_001818835.1_ASM181883v1	27774985	-
Candidatus Komeilibacteria bacterium RIFOXYA2_FULL_45_9	1798554	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.915654	44.8	-	MHKP01	54	922	755	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314381	GCA_001818855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/855/GCA_001818855.1_ASM181885v1	27774985	-
Candidatus Komeilibacteria bacterium RIFOXYD2_FULL_37_8	1798558	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.528833	36.4	-	MHKT01	54	568	394	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314696	GCA_001818865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/865/GCA_001818865.1_ASM181886v1	27774985	-
Candidatus Liptonbacteria bacterium RIFCSPLOWO2_01_FULL_53_13	1798651	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.777651	52	-	MHLB01	66	859	669	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315099	GCA_001818895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/895/GCA_001818895.1_ASM181889v1	27774985	-
Candidatus Liptonbacteria bacterium RIFOXYC1_FULL_36_8	1798655	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.542913	35.8	-	MHLF01	35	610	487	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314551	GCA_001818915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/915/GCA_001818915.1_ASM181891v1	27774985	-
Candidatus Lloydbacteria bacterium RIFCSPHIGHO2_01_FULL_41_20	1798657	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.531881	40.8	-	MHLH01	15	611	561	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314801	GCA_001818935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/935/GCA_001818935.1_ASM181893v1	27774985	-
Candidatus Lloydbacteria bacterium RIFCSPHIGHO2_01_FULL_49_22	1798658	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.27955	49.2	-	MHLI01	22	1268	1197	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314998	GCA_001818945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/945/GCA_001818945.1_ASM181894v1	27774985	-
Candidatus Lloydbacteria bacterium RIFCSPHIGHO2_01_FULL_54_11	1798659	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.27496	54.6	-	MHLJ01	74	1295	1137	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314915	GCA_001818975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/975/GCA_001818975.1_ASM181897v1	27774985	-
Candidatus Lloydbacteria bacterium RIFCSPHIGHO2_02_FULL_50_13	1798661	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.29661	50.3	-	MHLL01	78	1402	1263	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315518	GCA_001818995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/818/995/GCA_001818995.1_ASM181899v1	27774985	-
Candidatus Lloydbacteria bacterium RIFCSPHIGHO2_02_FULL_51_22	1798663	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.866097	50.2	-	MHLN01	56	922	835	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315520	GCA_001819015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/015/GCA_001819015.1_ASM181901v1	27774985	-
Candidatus Lloydbacteria bacterium RIFCSPHIGHO2_02_FULL_54_17	1798664	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.32347	54.5	-	MHLO01	51	1329	1260	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315446	GCA_001819035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/035/GCA_001819035.1_ASM181903v1	27774985	-
Candidatus Lloydbacteria bacterium RIFCSPLOWO2_01_FULL_54_18	1798666	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.22222	54.5	-	MHLQ01	44	1237	1164	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315101	GCA_001819055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/055/GCA_001819055.1_ASM181905v1	27774985	-
Candidatus Lloydbacteria bacterium RIFCSPLOWO2_02_FULL_51_11	1798667	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.876182	50	-	MHLR01	37	938	786	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316096	GCA_001819075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/075/GCA_001819075.1_ASM181907v1	27774985	-
Candidatus Lloydbacteria bacterium RIFCSPLOWO2_02_FULL_54_12	1798668	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.3664	54.2	-	MHLS01	68	1419	1251	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315964	GCA_001819095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/095/GCA_001819095.1_ASM181909v1	27774985	-
Candidatus Lloydbacteria bacterium RIFCSPLOWO2_12_FULL_51_9	1798669	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.557033	50.3	-	MHLT01	51	614	523	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315799	GCA_001819115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/115/GCA_001819115.1_ASM181911v1	27774985	-
Candidatus Lloydbacteria bacterium RIFOXYC12_FULL_46_25	1798670	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.755293	45.6	-	MHLU01	183	849	682	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314615	GCA_001819135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/135/GCA_001819135.1_ASM181913v1	27774985	-
Candidatus Nealsonbacteria bacterium RBG_13_36_15	1801660	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.376759	35.4	-	MHLV01	34	416	357	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314099	GCA_001819145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/145/GCA_001819145.1_ASM181914v1	27774985	-
Candidatus Nealsonbacteria bacterium RBG_13_37_56	1801661	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.542599	35.6	-	MHLW01	39	604	544	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313693	GCA_001819175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/175/GCA_001819175.1_ASM181917v1	27774985	-
Candidatus Nealsonbacteria bacterium RBG_13_38_11	1801662	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.444155	36.3	-	MHLX01	47	536	321	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314089	GCA_001819195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/195/GCA_001819195.1_ASM181919v1	27774985	-
Candidatus Nealsonbacteria bacterium RIFCSPHIGHO2_01_FULL_38_55	1801664	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.667615	38.3	-	MHLZ01	43	700	628	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314779	GCA_001819215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/215/GCA_001819215.1_ASM181921v1	27774985	-
Candidatus Nealsonbacteria bacterium RIFCSPHIGHO2_01_FULL_43_31	1801665	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.511328	42.3	-	MHMA01	43	617	540	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314807	GCA_001819235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/235/GCA_001819235.1_ASM181923v1	27774985	-
Candidatus Nealsonbacteria bacterium RIFCSPHIGHO2_02_38_10	1801666	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.585621	38	-	MHMB01	51	621	542	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313776	GCA_001819255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/255/GCA_001819255.1_ASM181925v1	27774985	-
Candidatus Nealsonbacteria bacterium RIFCSPHIGHO2_02_FULL_38_75	1801667	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.640654	38.1	-	MHMC01	40	681	607	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315401	GCA_001819265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/265/GCA_001819265.1_ASM181926v1	27774985	-
Candidatus Nealsonbacteria bacterium RIFCSPHIGHO2_02_FULL_43_13	1801668	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.524341	42.8	-	MHMD01	32	649	541	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315499	GCA_001819295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/295/GCA_001819295.1_ASM181929v1	27774985	-
Candidatus Nealsonbacteria bacterium RIFCSPHIGHO2_12_FULL_38_18	1801669	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.635481	38.2	-	MHME01	30	653	595	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315571	GCA_001819315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/315/GCA_001819315.1_ASM181931v1	27774985	-
Candidatus Nealsonbacteria bacterium RIFCSPLOWO2_01_FULL_43_32	1801672	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.552629	43.2	-	MHMH01	23	624	589	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315049	GCA_001819335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/335/GCA_001819335.1_ASM181933v1	27774985	-
Candidatus Nealsonbacteria bacterium RIFCSPLOWO2_02_39_8	1801674	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.629099	38.1	-	MHMJ01	54	659	585	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313792	GCA_001819345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/345/GCA_001819345.1_ASM181934v1	27774985	-
Candidatus Nealsonbacteria bacterium RIFCSPLOWO2_12_FULL_39_31	1801676	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.605409	38.4	-	MHML01	41	648	573	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315783	GCA_001819375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/375/GCA_001819375.1_ASM181937v1	27774985	-
Candidatus Niyogibacteria bacterium RIFCSPLOWO2_01_FULL_45_48	1801724	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.808436	45.3	-	MHMQ01	39	917	830	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315084	GCA_001819395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/395/GCA_001819395.1_ASM181939v1	27774985	-
Candidatus Niyogibacteria bacterium RIFCSPLOWO2_02_FULL_45_13	1801725	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.827704	45.2	-	MHMR01	27	907	789	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316088	GCA_001819415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/415/GCA_001819415.1_ASM181941v1	27774985	-
Candidatus Portnoybacteria bacterium RBG_13_40_8	1801990	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.690498	37	-	MHMT01	33	796	722	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313690	GCA_001819435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/819/435/GCA_001819435.1_ASM181943v1	27774985	-
Parageobacillus genomosp. 1	1295642	PRJNA189971	189971	Terrabacteria group	Firmicutes	3.62238	44.4	chromosome:NZ_CM002692.1/CM002692.1	AOTZ01	1	7476	7187	4/14/14	6/19/17	Chromosome	Emory University	SAMN02727286	GCA_000632515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/515/GCA_000632515.1_NUB3621v1	24788326	NUB3621
Acinetobacter qingfengensis	1262585	PRJNA344849	344849	Proteobacteria	Gammaproteobacteria	3.14077	38.1	-	MKKK01	74	2948	2830	10/6/16	4/6/17	Contig	National Institute of Public Health	SAMN05846377	GCA_001753595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/595/GCA_001753595.1_ASM175359v1	-	ANC 4671
Acinetobacter proteolyticus	1776741	PRJNA344555	344555	Proteobacteria	Gammaproteobacteria	4.37465	41.1	-	MKKJ01	36	4192	3985	10/6/16	4/6/17	Contig	National Institute of Public Health	SAMN05828395	GCA_001753605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/605/GCA_001753605.1_ASM175360v1	26822020	ANC 3849
Candidatus Brocadia sp. UTAMX1	1961113	PRJNA343219	343219	PVC group	Planctomycetes	3.1469	42.3	-	MWTF01	36	2828	2721	3/20/17	4/11/17	Contig	University of Wisconsin - Madison	SAMN06342761	GCA_002050325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/325/GCA_002050325.1_ASM205032v1	-	-
Duganella phyllosphaerae	762836	PRJNA309031	309031	Proteobacteria	Betaproteobacteria	6.18325	63.7	-	LROM01	158	5445	5221	10/11/16	4/17/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04320696	GCA_001758785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/785/GCA_001758785.1_ASM175878v1	27833590	T54
Thiotrichales bacterium HS_08	1899563	PRJEB15360	344868	Proteobacteria	Gammaproteobacteria	6.2576	43.1	-	FMSV01	562	-	-	10/6/16	10/24/16	Scaffold	UNIVERSITY OF CONCEPCION	SAMEA4475347	GCA_900099115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/115/GCA_900099115.1_scf_MBHS	-	-
Bifidobacterium breve JCM 7017	1385939	PRJNA214950	214950	Terrabacteria group	Actinobacteria	2.28892	58.7	chromosome:NZ_CP006712.1/CP006712.1	-	1	1995	1843	2/14/14	4/2/17	Complete Genome	University College Cork	SAMN03081479	GCA_000568975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/975/GCA_000568975.1_ASM56897v1	-	JCM 7017
Bifidobacterium breve NCFB 2258	1385941	PRJNA214954	214954	Terrabacteria group	Actinobacteria	2.3159	58.7	chromosome:NZ_CP006714.1/CP006714.1	-	1	2036	1870	2/14/14	4/2/17	Complete Genome	University College Cork	SAMN03081481	GCA_000569035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/035/GCA_000569035.1_ASM56903v1	-	NCFB 2258
Streptomyces abyssalis	933944	PRJNA242488	242488	Terrabacteria group	Actinobacteria	6.91019	70.3	-	LJGS01	45	5901	5537	10/4/16	3/13/17	Scaffold	"Beijing Institute of Genomics, Chinese Academy of Sciences"	SAMN04026261	GCA_001751345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/345/GCA_001751345.1_ASM175134v1	27446038	SCSIO 10389
Streptomyces qinglanensis	943816	PRJEB17027	351203	Terrabacteria group	Actinobacteria	7.17548	72.7	-	FOGO01	34	6250	5914	10/29/16	3/14/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421870	GCA_900111245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/245/GCA_900111245.1_IMG-taxon_2675903055_annotated_assembly	-	CGMCC 4.6825
Arthrobacter cupressi	1045773	PRJEB15967	348302	Terrabacteria group	Actinobacteria	4.05887	67	-	FNEI01	34	3702	3580	10/20/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216555	GCA_900099975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/975/GCA_900099975.1_IMG-taxon_2663762744_annotated_assembly	-	CGMCC 1.10783
Asinibacterium sp. OR43	1076522	PRJNA76969	76969	FCB group	Bacteroidetes/Chlorobi group	3.76802	45.6	-	ATYE01	12	3293	3214	7/15/13	10/20/16	Scaffold	JGI	SAMN02441571	GCA_000427525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/525/GCA_000427525.1_ASM42752v1	-	OR43
Salegentibacter salarius	435906	PRJNA342520	342520	FCB group	Bacteroidetes/Chlorobi group	3.3177	37	-	MJBR01	52	3031	2938	10/4/16	4/13/17	Scaffold	State Key Laboratory of Marine Enviromment Laboratory	SAMN05762002	GCA_001752425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/425/GCA_001752425.1_ASM175242v1	-	KCTC 12974
Trueperella sp. HMSC08B05	1581135	PRJNA269904	269904	Terrabacteria group	Actinobacteria	2.06526	65.5	-	LWNB01	52	1878	1783	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03434241	GCA_001808405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/405/GCA_001808405.1_ASM180840v1	-	HMSC08B05
Facklamia sp. HMSC062C11	1739262	PRJNA299912	299912	Terrabacteria group	Firmicutes	1.83556	38.9	-	LTHL01	46	1717	1617	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477575	GCA_001810675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/675/GCA_001810675.1_ASM181067v1	-	HMSC062C11
Turicella sp. HMSC068H04	1739296	PRJNA299946	299946	Terrabacteria group	Actinobacteria	2.67774	60.9	-	LTGK01	71	2511	2391	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477603	GCA_001811255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/255/GCA_001811255.1_ASM181125v1	-	HMSC068H04
Syntrophobacterales bacterium RIFOXYC2_FULL_60_23	1802290	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.58943	50.3	-	MICM01	821	1163	542	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316229	GCA_001829865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/865/GCA_001829865.1_ASM182986v1	27774985	-
Tenericutes bacterium GWA2_35_7	1802344	PRJNA288027	288027	Terrabacteria group	Tenericutes	1.75515	34.6	-	MICP01	122	1795	1464	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314105	GCA_001829915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/915/GCA_001829915.1_ASM182991v1	27774985	-
Tenericutes bacterium GWA2_38_26	1802345	PRJNA288027	288027	Terrabacteria group	Tenericutes	0.862668	38.4	-	MICQ01	79	881	776	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313964	GCA_001829935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/935/GCA_001829935.1_ASM182993v1	27774985	-
Tenericutes bacterium GWD2_38_27	1802348	PRJNA288027	288027	Terrabacteria group	Tenericutes	1.23515	38.4	-	MICT01	91	1217	1082	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314130	GCA_001829955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/955/GCA_001829955.1_ASM182995v1	27774985	-
Tenericutes bacterium GWE2_34_108	1802349	PRJNA288027	288027	Terrabacteria group	Tenericutes	2.17442	34.6	-	MICU01	15	2091	2033	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314133	GCA_001829965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/965/GCA_001829965.1_ASM182996v1	27774985	-
Tenericutes bacterium GWE2_38_8	1802350	PRJNA288027	288027	Terrabacteria group	Tenericutes	1.27649	37.3	-	MICV01	124	1334	879	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314134	GCA_001829995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/995/GCA_001829995.1_ASM182999v1	27774985	-
Tenericutes bacterium GWF2_35_184	1802352	PRJNA288027	288027	Terrabacteria group	Tenericutes	2.1613	34.6	-	MICX01	14	2075	2016	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313965	GCA_001830015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/015/GCA_001830015.1_ASM183001v1	27774985	-
Tenericutes bacterium GWF2_38_8	1802353	PRJNA288027	288027	Terrabacteria group	Tenericutes	1.247	37.1	-	MICY01	132	1294	880	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314223	GCA_001830035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/035/GCA_001830035.1_ASM183003v1	27774985	-
Tenericutes bacterium RIFOXYA12_FULL_35_10	1802355	PRJNA288027	288027	Terrabacteria group	Tenericutes	2.05497	34.6	-	MIDA01	106	2023	1851	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316214	GCA_001830045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/045/GCA_001830045.1_ASM183004v1	27774985	-
Tenericutes bacterium RIFOXYA2_FULL_36_32	1802356	PRJNA288027	288027	Terrabacteria group	Tenericutes	2.18365	34.6	-	MIDB01	20	2108	2045	10/21/16	10/24/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04314342	GCA_001830065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/065/GCA_001830065.1_ASM183006v1	27774985	-
Tenericutes bacterium RIFOXYC2_FULL_35_27	1802358	PRJNA288027	288027	Terrabacteria group	Tenericutes	2.17466	34.6	-	MIDD01	14	2094	2037	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314570	GCA_001830095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/095/GCA_001830095.1_ASM183009v1	27774985	-
Thaumarchaeota archaeon RBG_16_49_8	1802371	PRJNA288027	288027	TACK group	Thaumarchaeota	1.38893	47	-	MIDG01	124	1574	986	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316250	GCA_001830115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/115/GCA_001830115.1_ASM183011v1	27774985	-
Tenericutes bacterium RIFOXYD12_FULL_36_9	1802359	PRJNA288027	288027	Terrabacteria group	Tenericutes	2.2049	34.6	-	MIDE01	50	2171	2008	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314639	GCA_001830165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/165/GCA_001830165.1_ASM183016v1	27774985	-
Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10	1802433	PRJNA288027	288027	PVC group	Verrucomicrobia	3.01179	41	-	MIDR01	184	2457	2099	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315755	GCA_001830205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/205/GCA_001830205.1_ASM183020v1	27774985	-
Xanthomonadales bacterium GWF1_69_6	1802654	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	2.71629	69.2	-	MIDT01	166	2613	2132	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313897	GCA_001830235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/235/GCA_001830235.1_ASM183023v1	27774985	-
Xanthomonadales bacterium RIFOXYA1_FULL_69_10	1802656	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	3.05459	68.9	-	MIDV01	148	2890	2558	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314311	GCA_001830245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/245/GCA_001830245.1_ASM183024v1	27774985	-
Planctomycetes bacterium RIFCSPHIGHO2_12_FULL_51_37	1801979	PRJNA288027	288027	PVC group	Planctomycetes	1.3334	50.7	-	MHYV01	98	1261	1134	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315627	GCA_001830275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/275/GCA_001830275.1_ASM183027v1	27774985	-
Planctomycetes bacterium RIFCSPLOWO2_12_38_17	1801946	PRJNA288027	288027	PVC group	Planctomycetes	2.10613	37.8	-	MHYY01	181	2064	1827	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313795	GCA_001830285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/285/GCA_001830285.1_ASM183028v1	27774985	-
Planctomycetes bacterium RIFCSPLOWO2_12_FULL_39_13	1801982	PRJNA288027	288027	PVC group	Planctomycetes	1.88465	38.6	-	MHYZ01	207	1874	1609	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315858	GCA_001830315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/315/GCA_001830315.1_ASM183031v1	27774985	-
Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210	1802007	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	3.7327	62.9	-	MHZM01	1655	3896	2838	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316113	GCA_001830365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/365/GCA_001830365.1_ASM183036v1	27774985	-
Pseudomonadales bacterium RIFCSPLOWO2_12_59_9	1802009	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	3.22881	59.4	-	MHZN01	297	3120	2671	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313971	GCA_001830395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/395/GCA_001830395.1_ASM183039v1	27774985	-
Rhodospirillales bacterium RIFCSPLOWO2_02_FULL_58_16	1802021	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	2.72975	58.2	-	MIAA01	53	2704	2558	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315980	GCA_001830425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/425/GCA_001830425.1_ASM183042v1	27774985	-
Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28	1802022	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	2.75191	58.3	-	MIAB01	72	2704	2588	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315806	GCA_001830455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/455/GCA_001830455.1_ASM183045v1	27774985	-
Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_67_15	1802023	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	2.14886	65.7	-	MIAC01	290	2261	1751	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315861	GCA_001830475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/475/GCA_001830475.1_ASM183047v1	27774985	-
Sideroxydans sp. GWF2_59_14	1802154	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	0.95328	59.3	-	MIAD01	15	968	931	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314221	GCA_001830485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/485/GCA_001830485.1_ASM183048v1	27774985	-
Spirochaetes bacterium GWB1_48_6	1802175	PRJNA288027	288027	Spirochaetes	unclassified Spirochaetes	1.59956	47.3	-	MIAP01	113	1637	1251	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314117	GCA_001830565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/565/GCA_001830565.1_ASM183056v1	27774985	-
Spirochaetes bacterium GWD1_27_9	1802182	PRJNA288027	288027	Spirochaetes	unclassified Spirochaetes	4.07893	26.9	-	MIAW01	267	3475	3119	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314207	GCA_001830585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/585/GCA_001830585.1_ASM183058v1	27774985	-
Spirochaetes bacterium GWE1_60_18	1802185	PRJNA288027	288027	Spirochaetes	unclassified Spirochaetes	3.61853	60.5	-	MIAZ01	79	2993	2889	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313956	GCA_001830615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/615/GCA_001830615.1_ASM183061v1	27774985	-
Spirochaetes bacterium GWF1_60_12	1802191	PRJNA288027	288027	Spirochaetes	unclassified Spirochaetes	3.59302	60.5	-	MIBF01	67	3005	2898	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313953	GCA_001830635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/635/GCA_001830635.1_ASM183063v1	27774985	-
Spirochaetes bacterium RIFOXYC1_FULL_54_7	1802198	PRJNA288027	288027	Spirochaetes	unclassified Spirochaetes	3.42645	54.4	-	MIBM01	444	3432	2446	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316185	GCA_001830645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/645/GCA_001830645.1_ASM183064v1	27774985	-
Syntrophobacterales bacterium GWC2_56_13	1802287	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.59985	56.1	-	MICJ01	119	2572	2255	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313917	GCA_001830835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/835/GCA_001830835.1_ASM183083v1	27774985	-
Tenericutes bacterium GWC2_34_14	1802346	PRJNA288027	288027	Terrabacteria group	Tenericutes	2.15596	34.6	-	MICR01	18	2071	2006	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313966	GCA_001830865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/865/GCA_001830865.1_ASM183086v1	27774985	-
Tenericutes bacterium GWC2_39_45	1802347	PRJNA288027	288027	Terrabacteria group	Tenericutes	0.92557	38.1	-	MICS01	77	907	809	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314205	GCA_001830895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/895/GCA_001830895.1_ASM183089v1	27774985	-
Tenericutes bacterium GWF1_35_14	1802351	PRJNA288027	288027	Terrabacteria group	Tenericutes	2.17046	34.6	-	MICW01	17	2088	2031	10/21/16	10/24/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04313967	GCA_001830905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/905/GCA_001830905.1_ASM183090v1	27774985	-
Tenericutes bacterium GWF2_57_13	1802354	PRJNA288027	288027	Terrabacteria group	Tenericutes	1.59018	56.9	-	MICZ01	55	1458	1315	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313937	GCA_001830935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/935/GCA_001830935.1_ASM183093v1	27774985	-
Tenericutes bacterium RIFOXYB2_FULL_36_25	1802357	PRJNA288027	288027	Terrabacteria group	Tenericutes	2.19723	34.6	-	MIDC01	27	2122	2057	10/21/16	10/24/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04314429	GCA_001830945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/945/GCA_001830945.1_ASM183094v1	27774985	-
Tenericutes bacterium RIFOXYD2_FULL_35_11	1802360	PRJNA288027	288027	Terrabacteria group	Tenericutes	2.1805	34.6	-	MIDF01	36	2133	1987	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314711	GCA_001830975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/975/GCA_001830975.1_ASM183097v1	27774985	-
Verrucomicrobia bacterium GWC2_42_7	1802430	PRJNA288027	288027	PVC group	Verrucomicrobia	1.2965	41.4	-	MIDO01	133	1307	1018	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314128	GCA_001831055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/055/GCA_001831055.1_ASM183105v1	27774985	-
Verrucomicrobia bacterium GWF2_51_19	1802431	PRJNA288027	288027	PVC group	Verrucomicrobia	1.25924	50.5	-	MIDP01	43	1196	1119	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313935	GCA_001831095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/095/GCA_001831095.1_ASM183109v1	27774985	-
Verrucomicrobia bacterium GWF2_62_7	1802432	PRJNA288027	288027	PVC group	Verrucomicrobia	3.33861	60.6	-	MIDQ01	443	3221	1939	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314228	GCA_001831115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/115/GCA_001831115.1_ASM183111v1	27774985	-
Verrucomicrobia bacterium RIFCSPLOWO2_12_FULL_64_8	1802434	PRJNA288027	288027	PVC group	Verrucomicrobia	3.24038	63.9	-	MIDS01	1053	2862	2215	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315863	GCA_001831125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/125/GCA_001831125.1_ASM183112v1	27774985	-
Xanthomonadales bacterium RIFOXYA1_FULL_68_6	1802655	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	2.19464	64.2	-	MIDU01	1086	1970	1076	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314334	GCA_001831135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/135/GCA_001831135.1_ASM183113v1	27774985	-
Xanthomonadales bacterium RIFOXYD1_FULL_69_11	1802657	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	2.97317	68.5	-	MIDW01	150	2849	2331	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314732	GCA_001831175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/175/GCA_001831175.1_ASM183117v1	27774985	-
Halodesulfovibrio aestuarii DSM 10141	1121434	PRJNA188877	188877	Proteobacteria	delta/epsilon subdivisions	3.40171	45	-	AULY01	14	3042	2919	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441474	GCA_000422525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/525/GCA_000422525.1_ASM42252v1	-	DSM 10141
Anaerosphaera sp. HMSC064C01	1739304	PRJNA299954	299954	Terrabacteria group	Firmicutes	1.60771	34.6	-	LTGD01	24	1518	1453	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477615	GCA_001811395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/395/GCA_001811395.1_ASM181139v1	-	HMSC064C01
Globicatella sp. HMSC072A10	1739315	PRJNA299965	299965	Terrabacteria group	Firmicutes	2.46746	35.2	-	LTFS01	216	2133	2042	10/17/16	4/17/17	Scaffold	The Genome Institute at Washington University	SAMN04477626	GCA_001811625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/625/GCA_001811625.1_ASM181162v1	-	HMSC072A10
Alloscardovia sp. HMSC034E08	1739413	PRJNA300063	300063	Terrabacteria group	Actinobacteria	1.9622	47.2	-	LTWS01	18	1759	1617	10/17/16	4/17/17	Scaffold	The Genome Institute at Washington University	SAMN04480072	GCA_001813415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/415/GCA_001813415.1_ASM181341v1	-	HMSC034E08
Abiotrophia sp. HMSC24B09	1581061	PRJNA269830	269830	Terrabacteria group	Firmicutes	2.02078	46.6	-	LWPV01	31	1886	1803	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436211	GCA_001815865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/865/GCA_001815865.1_ASM181586v1	-	HMSC24B09
Bifidobacterium breve 689b	1385942	PRJNA214955	214955	Terrabacteria group	Actinobacteria	2.33171	58.7	chromosome:NZ_CP006715.1/CP006715.1	-	1	2052	1887	2/14/14	4/2/17	Complete Genome	University of Parma	SAMN03081482	GCA_000569055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/055/GCA_000569055.1_ASM56905v1	-	689b
Halodesulfovibrio spirochaetisodalis	1560234	PRJNA272465	272465	Proteobacteria	delta/epsilon subdivisions	3.61459	46.2	-	JXMS01	59	3265	3112	6/20/16	4/12/17	Scaffold	JNTU Hyderabad	SAMN03282654	GCA_001672295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/295/GCA_001672295.1_ASM167229v1	-	JC271
Kytococcus sp. HMSC28H12	1581067	PRJNA269836	269836	Terrabacteria group	Actinobacteria	2.3235	73	-	LWPN01	454	2306	1987	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436215	GCA_001816045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/045/GCA_001816045.1_ASM181604v1	-	HMSC28H12
Pseudomonas punonensis	1220495	PRJNA313378	313378	Proteobacteria	Gammaproteobacteria	4.52908	61.5	-	LWHA01	31	4185	4079	10/25/16	4/13/17	Contig	King Abdullah University of Science and Technology (KAUST)	SAMN04520144	GCA_001839645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/645/GCA_001839645.1_ASM183964v1	-	D1-6
Sphingomonas haloaromaticamans	653954	PRJNA341829	341829	Proteobacteria	Alphaproteobacteria	4.92374	66.2	-	MIPT01	12	4690	4458	10/25/16	4/17/17	Scaffold	University of South Australia	SAMN05729391	GCA_001853345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/345/GCA_001853345.1_ASM185334v1	-	P3
Flavobacterium spartansii	1278819	PRJNA341797	341797	FCB group	Bacteroidetes/Chlorobi group	5.35995	35.7	-	MIKE01	29	4482	4328	10/25/16	4/13/17	Contig	Michigan State University	SAMN05728473	GCA_001853485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/485/GCA_001853485.1_ASM185348v1	-	MSU
Mycobacterium franklinii	948102	PRJNA323571	323571	Terrabacteria group	Actinobacteria	5.43173	64.1	-	MAFQ01	32	5413	5223	3/3/17	3/6/17	Contig	LNCC	SAMN05186797	GCA_002013895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/895/GCA_002013895.1_ASM201389v1	-	CV002
Pseudomonas argentinensis	289370	PRJNA312745	312745	Proteobacteria	Gammaproteobacteria	5.04972	64	-	LWDZ01	26	4611	4445	10/25/16	4/13/17	Contig	King Abdullah University of Science and Technology (KAUST)	SAMN04505866	GCA_001839655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/655/GCA_001839655.1_ASM183965v1	-	SA190
Bifidobacterium breve S27	936351	PRJNA214956	214956	Terrabacteria group	Actinobacteria	2.29446	58.7	chromosome:NZ_CP006716.1/CP006716.1	-	1	2005	1837	2/14/14	4/2/17	Complete Genome	University of Ulm	SAMN03081483	GCA_000569075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/075/GCA_000569075.1_ASM56907v1	-	S27
Bifidobacterium breve UCC2003	326426	PRJNA13487	13487	Terrabacteria group	Actinobacteria	2.42268	58.7	chromosome:NC_020517.1/CP000303.1	-	1	2131	1960	7/6/11	3/30/17	Complete Genome	University College Cork	SAMN02604112	GCA_000220135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/135/GCA_000220135.1_ASM22013v1	21690406	UCC2003
Alteromonas lipolytica	1856405	PRJNA336468	336468	Proteobacteria	Gammaproteobacteria	5.01845	48.4	-	MJIC01	21	4451	4345	10/12/16	4/13/17	Scaffold	"Second Institute of Oceanography, State Oceanic Administration"	SAMN05511236	GCA_001758465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/465/GCA_001758465.1_ASM175846v1	-	JW12
Bifidobacterium breve ACS-071-V-Sch8b	866777	PRJNA51077	51077	Terrabacteria group	Actinobacteria	2.32749	58.7	chromosome:NC_017218.1/CP002743.1	-	1	2046	1877	5/17/11	3/30/17	Complete Genome	J. Craig Venter Institute	SAMN00100758	GCA_000213865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/865/GCA_000213865.1_ASM21386v1	-	ACS-071-V-Sch8b
Aeromonas veronii B565	998088	PRJNA63671	63671	Proteobacteria	Gammaproteobacteria	4.55178	58.7	chromosome:NC_015424.1/CP002607.1	-	1	4199	4018	4/13/11	5/18/17	Complete Genome	"The Key Laboratory of Molecular Microbiology and Technology, Ministry of Education & Feed Research Institute, Chinese Academy of"	SAMN02603940	GCA_000204115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/115/GCA_000204115.1_ASM20411v1	21551296	B565
Pseudoalteromonas byunsanensis	327939	PRJNA336466	336466	Proteobacteria	Gammaproteobacteria	4.74322	42.5	-	MNAN01	37	4095	3935	10/26/16	4/17/17	Scaffold	"Second Institute of Oceanography, State Oceanic Administration"	SAMN05792550	GCA_001854475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/475/GCA_001854475.1_ASM185447v1	-	JCM 12483
Kushneria sp. YCWA18	657387	PRJNA343356	343356	Proteobacteria	Gammaproteobacteria	3.60429	59.1	-	MKZT01	33	3391	3096	10/26/16	4/17/17	Contig	The First Institute of State Oceanic Administration (SOA)	SAMN05791069	GCA_001854625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/625/GCA_001854625.1_ASM185462v1	-	YCWA18
Pseudomonas peli	592361	PRJEB15912	348220	Proteobacteria	Gammaproteobacteria	4.48712	59.7	-	FMTL01	20	4319	4205	10/14/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216370	GCA_900099645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/645/GCA_900099645.1_IMG-taxon_2671180067_annotated_assembly	-	DSM 17833
Ruminococcaceae bacterium YRB3002	1520819	PRJEB15956	348232	Terrabacteria group	Firmicutes	3.01038	47.8	-	FMTG01	51	2695	2572	10/14/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910456	GCA_900099715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/715/GCA_900099715.1_IMG-taxon_2593339241_annotated_assembly	-	YRB3002
Paenibacillus tianmuensis	624147	PRJEB15998	348264	Terrabacteria group	Firmicutes	6.0296	52.5	-	FMTT01	113	5667	5205	10/14/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487970	GCA_900100345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/345/GCA_900100345.1_IMG-taxon_2617270934_annotated_assembly	-	CGMCC 1.8946
Lachnospiraceae bacterium C10	1520822	PRJEB15974	348286	Terrabacteria group	Firmicutes	2.94604	44.6	-	FMTN01	70	2724	2579	10/14/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910400	GCA_900100095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/095/GCA_900100095.1_IMG-taxon_2593339216_annotated_assembly	-	C10
Borreliella japonica	34095	PRJEB15958	348230	Spirochaetes	Spirochaetia	1.18486	28	-	FMTE01	49	1179	1054	10/14/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02983004	GCA_900099615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/615/GCA_900099615.1_IMG-taxon_2597490341_annotated_assembly	-	ATCC 51557
Eubacterium ruminantium	42322	PRJEB19563	376366	Terrabacteria group	Firmicutes	2.8411	37.2	-	FUXA01	34	2530	2424	3/4/17	3/11/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745110	GCA_900167085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/085/GCA_900167085.1_IMG-taxon_2585428142_annotated_assembly	-	ATCC 17233
Sphingobium faniae	570446	PRJEB15913	348219	Proteobacteria	Alphaproteobacteria	4.84039	63.3	-	FMTU01	93	4828	4574	10/14/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02927924	GCA_900100475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/475/GCA_900100475.1_IMG-taxon_2596583600_annotated_assembly	-	CGMCC 1.7749
Ancylobacter rudongensis	177413	PRJEB15980	348281	Proteobacteria	Alphaproteobacteria	4.50508	67.9	-	FMTP01	18	4171	4058	10/14/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05660859	GCA_900100155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/155/GCA_900100155.1_IMG-taxon_2596583652_annotated_assembly	-	CGMCC 1.1761
Asticcacaulis taihuensis	260084	PRJEB15990	348272	Proteobacteria	Alphaproteobacteria	3.96783	59.8	-	FMTS01	19	3614	3516	10/14/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02927928	GCA_900100255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/255/GCA_900100255.1_IMG-taxon_2596583650_annotated_assembly	-	CGMCC 1.3431
Rhizobium loessense	158890	PRJEB15953	348226	Proteobacteria	Alphaproteobacteria	6.72849	59.6	-	FMTM01	32	6582	6238	10/14/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02927900	GCA_900099775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/775/GCA_900099775.1_IMG-taxon_2596583570_annotated_assembly	-	CGMCC 1.3401
Microvirga guangxiensis	549386	PRJEB15809	347779	Proteobacteria	Alphaproteobacteria	4.72173	61.4	-	FMVJ01	34	4534	4352	10/17/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02927923	GCA_900102135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/135/GCA_900102135.1_IMG-taxon_2596583582_annotated_assembly	-	CGMCC 1.7666
Ruminococcaceae bacterium P7	1200751	PRJEB15895	347950	Terrabacteria group	Firmicutes	3.05942	50.3	-	FMUA01	87	2939	2772	10/17/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910436	GCA_900100595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/595/GCA_900100595.1_IMG-taxon_2593339217_annotated_assembly	-	P7
Actinobacteria bacterium DSM 45722	1566299	PRJEB16033	348496	Terrabacteria group	Actinobacteria	4.21922	74.4	-	FMUH01	14	4101	3973	10/17/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN03159343	GCA_900101025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/025/GCA_900101025.1_IMG-taxon_2602042045_annotated_assembly	-	DSM 45722
Lachnospiraceae bacterium XPB1003	1520825	PRJEB15805	347783	Terrabacteria group	Firmicutes	3.14554	43.3	-	FMVK01	42	2885	2764	10/17/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910370	GCA_900102065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/065/GCA_900102065.1_IMG-taxon_2593339154_annotated_assembly	-	XPB1003
Flavobacterium anhuiense	459526	PRJEB15782	347719	FCB group	Bacteroidetes/Chlorobi group	5.34009	34.4	-	FMVC01	16	4565	4443	10/17/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02927916	GCA_900101855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/855/GCA_900101855.1_IMG-taxon_2596583647_annotated_assembly	-	CGMCC 1.6859
Basfia succiniciproducens	653940	PRJEB15727	347698	Proteobacteria	Gammaproteobacteria	2.22782	42.3	-	FMUQ01	29	2093	2001	10/17/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910354	GCA_900101275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/275/GCA_900101275.1_IMG-taxon_2593339214_annotated_assembly	-	DSM 22022
Microbacteriaceae bacterium	1873462	PRJEB15584	348844	Terrabacteria group	Actinobacteria	3.22802	69.4	-	FMSE01	22	3080	2979	10/17/16	4/13/17	Contig	Elham Karimi	SAMEA4475189	GCA_900098805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/805/GCA_900098805.1_Microbacterium_sp._strain_Alg239_V18	-	Alg239_V181
Nitrosomonas mobilis	51642	PRJEB15545	345080	Proteobacteria	Betaproteobacteria	3.08286	48.5	-	FMWO01	112	2972	2706	10/19/16	8/1/17	Contig	WASEDA university	SAMEA4505502	GCA_900103035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/035/GCA_900103035.1_NSMM	-	-
Lentzea jiangxiensis	641025	PRJEB16252	348884	Terrabacteria group	Actinobacteria	8.59128	70.2	-	FNIX01	61	7992	7654	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421507	GCA_900104175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/175/GCA_900104175.1_IMG-taxon_2675903132_annotated_assembly	-	CGMCC 4.6609
Aquimonas voraii	265719	PRJEB15775	347725	Proteobacteria	Gammaproteobacteria	4.42817	68.5	-	FNAG01	40	3620	3511	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488509	GCA_900101825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/825/GCA_900101825.1_IMG-taxon_2622736515_annotated_assembly	-	DSM 16957
Lachnospiraceae bacterium G11	1200747	PRJEB16210	348999	Terrabacteria group	Firmicutes	3.04334	43.4	-	FMWZ01	31	2781	2691	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910368	GCA_900103495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/495/GCA_900103495.1_IMG-taxon_2593339220_annotated_assembly	-	G11
Methylophilus rhizosphaerae	492660	PRJEB16051	348514	Proteobacteria	Betaproteobacteria	2.76133	51.4	-	FNFX01	10	2689	2609	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192566	GCA_900100975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/975/GCA_900100975.1_IMG-taxon_2654588194_annotated_assembly	-	CBMB127
Romboutsia lituseburensis DSM 797	1121325	PRJEB16174	348945	Terrabacteria group	Firmicutes	3.78246	27.6	-	FNGW01	29	3592	3493	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04515677	GCA_900103615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/615/GCA_900103615.1_IMG-taxon_2634166902_annotated_assembly	-	DSM 797
Idiomarina indica	1159017	PRJEB16293	348893	Proteobacteria	Gammaproteobacteria	2.20636	49.3	-	FMXN01	31	2140	2032	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02927930	GCA_900104245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/245/GCA_900104245.1_IMG-taxon_2596583643_annotated_assembly	-	CGMCC 1.10824
Desulfonauticus submarinus	206665	PRJEB16243	348967	Proteobacteria	delta/epsilon subdivisions	2.1007	32.5	-	FNIN01	23	2104	2014	10/20/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488516	GCA_900104045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/045/GCA_900104045.1_IMG-taxon_2619619038_annotated_assembly	-	DSM 15269
Methanolobus vulcani	38026	PRJEB15876	347940	Euryarchaeota	Methanomicrobia	2.94791	40.3	-	FNCA01	20	2845	2734	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488589	GCA_900100715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/715/GCA_900100715.1_IMG-taxon_2642422561_annotated_assembly	-	PL 12/M
Acinetobacter kookii	1226327	PRJEB15476	343903	Proteobacteria	Gammaproteobacteria	3.0854	43	-	FMYO01	22	2952	2820	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421732	GCA_900096895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/096/895/GCA_900096895.1_IMG-taxon_2671180219_annotated_assembly	-	ANC 4667
Sinosporangium album	504805	PRJEB15896	347949	Terrabacteria group	Actinobacteria	7.05714	69.3	-	FNCN01	98	6146	5792	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421505	GCA_900100605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/605/GCA_900100605.1_IMG-taxon_2675903142_annotated_assembly	-	CPCC 201354
Pseudomonas panipatensis	428992	PRJEB15946	348241	Proteobacteria	Gammaproteobacteria	5.77553	65.6	-	FNDS01	34	5371	5227	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216272	GCA_900099785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/785/GCA_900099785.1_IMG-taxon_2663762770_annotated_assembly	-	CCM 7469
Desulfonatronum thiosulfatophilum	617002	PRJEB16267	348869	Proteobacteria	delta/epsilon subdivisions	3.60213	56.2	-	FMXO01	34	3295	3171	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05660653	GCA_900104215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/215/GCA_900104215.1_IMG-taxon_2596583601_annotated_assembly	-	ASO4-2
Halomonas shengliensis	419597	PRJEB16251	348885	Proteobacteria	Gammaproteobacteria	3.53071	68.6	-	FNIV01	24	3314	3209	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487957	GCA_900104135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/135/GCA_900104135.1_IMG-taxon_2617270760_annotated_assembly	-	CGMCC 1.6444
Halomonas gudaonensis	376427	PRJEB15988	348283	Proteobacteria	Gammaproteobacteria	4.16664	64.9	-	FNES01	44	3940	3790	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487954	GCA_900100195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/195/GCA_900100195.1_IMG-taxon_2617270877_annotated_assembly	-	CGMCC 1.6133
Glycomyces harbinensis	58114	PRJEB15767	347732	Terrabacteria group	Actinobacteria	6.17152	70.6	-	FNAD01	36	5510	5367	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216270	GCA_900101745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/745/GCA_900101745.1_IMG-taxon_2663762751_annotated_assembly	-	CGMCC 4.3516
Thermus arciformis	482827	PRJEB15814	347775	Terrabacteria group	Deinococcus-Thermus	2.4423	68.8	-	FNBC01	88	2686	2448	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488243	GCA_900102145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/145/GCA_900102145.1_IMG-taxon_2617270932_annotated_assembly	-	CGMCC 1.6992
[Eubacterium] angustum	39480	PRJNA344552	344552	Terrabacteria group	Firmicutes	2.3435	43.6	-	MKIE01	38	2443	2325	10/27/16	4/17/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05828332	GCA_001855385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/385/GCA_001855385.1_ASM185538v1	-	DSM 1989
Paracoccus chinensis	525640	PRJEB16111	348600	Proteobacteria	Alphaproteobacteria	3.63287	68.1	-	FNGE01	84	3559	3340	10/20/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487971	GCA_900102885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/885/GCA_900102885.1_IMG-taxon_2617270907_annotated_assembly	-	CGMCC 1.7655
Bacillus daliensis	745820	PRJEB16239	348971	Terrabacteria group	Firmicutes	3.77816	42.3	-	FNIL01	28	3568	3464	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488053	GCA_900103955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/955/GCA_900103955.1_IMG-taxon_2617270767_annotated_assembly	-	CGMCC 1.10369
Pseudomonas grimontii	129847	PRJEB16056	348509	Proteobacteria	Gammaproteobacteria	7.10774	60.1	-	FNKM01	2	6591	6286	10/20/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04490186	GCA_900101085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/085/GCA_900101085.1_IMG-taxon_2639762651_annotated_assembly	-	BS2976
Bradyrhizobium ottawaense	931866	PRJEB15915	348217	Proteobacteria	Alphaproteobacteria	8.33921	62.3	chromosome I:NZ_LT629693.1/LT629693.1	-	1	7956	7624	10/20/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05444163	GCA_900099825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/825/GCA_900099825.1_IMG-taxon_2693430034_annotated_assembly	-	GAS524
Lachnospiraceae bacterium XBB2008	1520826	PRJEB15825	347765	Terrabacteria group	Firmicutes	3.52103	47.4	-	FMVL01	24	3108	2994	10/17/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910292	GCA_900102235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/235/GCA_900102235.1_IMG-taxon_2593339165_annotated_assembly	-	XBB2008
Novosphingobium stygium	48937	PRJEB15847	347802	Proteobacteria	Alphaproteobacteria	4.22647	65.1	-	FMVR01	27	4027	3927	10/17/16	8/3/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05660666	GCA_900102455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/455/GCA_900102455.1_IMG-taxon_2597490364_annotated_assembly	-	ATCC 700280
Desulfoluna spongiiphila	419481	PRJEB15715	347661	Proteobacteria	delta/epsilon subdivisions	6.53511	57.2	-	FMUX01	52	5352	5203	10/17/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216233	GCA_900101345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/345/GCA_900101345.1_IMG-taxon_2654587882_annotated_assembly	-	AA1
Alkaliphilus peptidifermentans DSM 18978	1120976	PRJEB15752	347666	Terrabacteria group	Firmicutes	4.45979	34.1	-	FMUS01	73	4251	4072	10/17/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03080606	GCA_900101495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/495/GCA_900101495.1_IMG-taxon_2599185223_annotated_assembly	-	DSM 18978
Lachnospiraceae bacterium YSD2013	1520828	PRJEB15891	347954	Terrabacteria group	Firmicutes	3.24276	45.1	-	FMTX01	54	2935	2835	10/17/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02910339	GCA_900100895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/895/GCA_900100895.1_IMG-taxon_2596583542_annotated_assembly	-	YSD2013
Flavobacterium caeni	490189	PRJEB15790	347711	FCB group	Bacteroidetes/Chlorobi group	3.70024	49	-	FMVF01	81	3328	3222	10/17/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02927903	GCA_900101895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/895/GCA_900101895.1_IMG-taxon_2596583574_annotated_assembly	-	CGMCC 1.7031
Paracoccus tibetensis	336292	PRJEB15854	347789	Proteobacteria	Alphaproteobacteria	3.9114	68.3	-	FMVT01	34	3766	3620	10/17/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660710	GCA_900102505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/505/GCA_900102505.1_IMG-taxon_2596583549_annotated_assembly	-	CGMCC 1.8925
Afifella marina DSM 2698	1120955	PRJEB15694	347443	Proteobacteria	Alphaproteobacteria	3.96342	63.2	-	FMVW01	24	3701	3595	10/17/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN03080610	GCA_900102695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/695/GCA_900102695.1_IMG-taxon_2595699009_annotated_assembly	-	DSM 2698
Epibacterium ulvae	1156985	PRJEB16117	348594	Proteobacteria	Alphaproteobacteria	3.99407	52.8	-	FMWG01	30	3874	3752	10/17/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488118	GCA_900102795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/795/GCA_900102795.1_IMG-taxon_2622736501_annotated_assembly	-	U95
Thiohalomonas denitrificans	415747	PRJEB16125	348586	Proteobacteria	Gammaproteobacteria	3.56363	59.9	-	FMWD01	28	3306	3186	10/17/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03097708	GCA_900102855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/855/GCA_900102855.1_IMG-taxon_2593339163_annotated_assembly	-	HLD2
Acidaminobacter hydrogenoformans DSM 2784	1120920	PRJEB16118	348593	Terrabacteria group	Firmicutes	3.61561	48.8	-	FMWL01	41	3329	3199	10/17/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03080599	GCA_900103005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/005/GCA_900103005.1_IMG-taxon_2599185234_annotated_assembly	-	DSM 2784
Pseudobutyrivibrio xylanivorans	185007	PRJEB16124	348587	Terrabacteria group	Firmicutes	3.21394	39.6	-	FMWK01	34	2950	2848	10/17/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02910350	GCA_900103015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/015/GCA_900103015.1_IMG-taxon_2593339222_annotated_assembly	-	DSM 10317
Melghirimyces thermohalophilus	1236220	PRJEB15688	347449	Terrabacteria group	Firmicutes	3.1889	52.9	-	FMZA01	35	3251	3074	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488112	GCA_900102685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/685/GCA_900102685.1_IMG-taxon_2615840705_annotated_assembly	-	DSM 45514
Ulvibacter litoralis	227084	PRJEB15808	347780	FCB group	Bacteroidetes/Chlorobi group	3.82193	35.8	-	FNBA01	56	3476	3410	10/20/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421855	GCA_900102055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/055/GCA_900102055.1_IMG-taxon_2675903215_annotated_assembly	-	DSM 16195
Desulforhopalus singaporensis	91360	PRJEB16283	348852	Proteobacteria	delta/epsilon subdivisions	5.00886	50.6	-	FNJI01	124	4415	4203	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660330	GCA_900104445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/445/GCA_900104445.1_IMG-taxon_2596583525_annotated_assembly	-	DSM 12130
Actinopolyspora xinjiangensis	405564	PRJEB16299	348887	Terrabacteria group	Actinobacteria	5.03815	68.5	-	FNJR01	34	4572	4361	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487905	GCA_900104475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/475/GCA_900104475.1_IMG-taxon_2619619031_annotated_assembly	-	DSM 46732
Nonomuraea maritima	683260	PRJEB16001	348206	Terrabacteria group	Actinobacteria	8.26759	70.9	-	FNFB01	85	7883	7541	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421874	GCA_900100395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/395/GCA_900100395.1_IMG-taxon_2675903066_annotated_assembly	-	CGMCC 4.5681
Paraburkholderia phenazinium	60549	PRJEB18285	355701	Proteobacteria	Betaproteobacteria	8.31947	61.4	-	FSRM01	2	7393	7199	12/14/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444168	GCA_900141745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/745/GCA_900141745.1_IMG-taxon_2695421038_annotated_assembly	-	GAS86
Chitinophaga filiformis	104663	PRJEB15834	347757	FCB group	Bacteroidetes/Chlorobi group	8.62552	45.5	-	FNBN01	21	6737	6617	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488121	GCA_900102545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/545/GCA_900102545.1_IMG-taxon_2634166296_annotated_assembly	-	DSM 527
Psychroflexus sediminis	470826	PRJEB15916	348216	FCB group	Bacteroidetes/Chlorobi group	2.9735	38.5	-	FNCW01	36	2697	2599	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488027	GCA_900099815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/815/GCA_900099815.1_IMG-taxon_2622736510_annotated_assembly	-	DSM 19803
Pseudomonas arsenicoxydans	702115	PRJEB16230	348980	Proteobacteria	Gammaproteobacteria	6.50298	58.7	chromosome I:NZ_LT629705.1/LT629705.1	-	1	6078	5820	10/20/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489798	GCA_900103875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/875/GCA_900103875.1_IMG-taxon_2636416065_annotated_assembly	-	CECT 7543
Dyadobacter soli	659014	PRJEB15786	347715	FCB group	Bacteroidetes/Chlorobi group	8.74478	50.5	-	FNAN01	45	7263	7096	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487996	GCA_900101885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/885/GCA_900101885.1_IMG-taxon_2619619010_annotated_assembly	-	DSM 25329
Methylobacterium phyllostachyos	582672	PRJEB16209	348959	Proteobacteria	Alphaproteobacteria	6.01505	68.7	-	FNHS01	47	5751	5509	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216360	GCA_900103445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/445/GCA_900103445.1_IMG-taxon_2651870120_annotated_assembly	-	BL47
Bacillus salsus	930152	PRJEB16304	348898	Terrabacteria group	Firmicutes	4.78974	35.9	-	FNJU01	32	4618	4423	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216565	GCA_900104555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/555/GCA_900104555.1_IMG-taxon_2651870172_annotated_assembly	-	IBRC-M10078
Phycicoccus dokdonensis	443156	PRJEB16272	348864	Terrabacteria group	Actinobacteria	3.94216	71.2	chromosome I:NZ_LT629711.1/LT629711.1	-	1	3725	3589	10/20/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489867	GCA_900104525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/525/GCA_900104525.1_IMG-taxon_2634166372_annotated_assembly	-	DSM 22329
Muricauda zhangzhouensis	1073328	PRJEB16103	348607	FCB group	Bacteroidetes/Chlorobi group	3.74288	39.9	-	FNKI01	9	3367	3296	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216294	GCA_900102925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/925/GCA_900102925.1_IMG-taxon_2667527237_annotated_assembly	-	CGMCC 1.11028
Bosea robiniae	1036780	PRJEB15855	347788	Proteobacteria	Alphaproteobacteria	5.2791	66.3	-	FNBZ01	21	5032	4926	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421844	GCA_900102525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/525/GCA_900102525.1_IMG-taxon_2675903146_annotated_assembly	-	DSM 26672
Albidovulum xiamenense	990712	PRJEB16047	348483	Proteobacteria	Alphaproteobacteria	3.12764	68.2	-	FNFV01	24	3049	2947	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216257	GCA_900102905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/905/GCA_900102905.1_IMG-taxon_2663762716_annotated_assembly	-	CGMCC 1.10789
Lentzea violacea	128104	PRJEB15989	348282	Terrabacteria group	Actinobacteria	8.67108	69	-	FNET01	57	8295	8000	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488074	GCA_900100275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/275/GCA_900100275.1_IMG-taxon_2619619033_annotated_assembly	-	DSM 44796
Algoriphagus faecimaris	686796	PRJEB15764	347735	FCB group	Bacteroidetes/Chlorobi group	4.66764	41.4	-	FNAC01	109	4155	3987	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488104	GCA_900101705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/705/GCA_900101705.1_IMG-taxon_2622736587_annotated_assembly	-	DSM 23095
Limimonas halophila	1082479	PRJEB15880	347964	Proteobacteria	Alphaproteobacteria	3.03936	69.5	-	FNCE01	26	2834	2752	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216241	GCA_900100655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/655/GCA_900100655.1_IMG-taxon_2654587884_annotated_assembly	-	DSM 25584
Peptococcus niger	2741	PRJEB15774	347726	Terrabacteria group	Firmicutes	1.96847	49.6	-	FNAF01	29	1903	1786	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04489866	GCA_900101835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/835/GCA_900101835.1_IMG-taxon_2634166305_annotated_assembly	-	DSM 20475
Cryobacterium psychrotolerans	386301	PRJEB16046	348484	Terrabacteria group	Actinobacteria	3.24711	68.3	-	FNFU01	45	3087	2930	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216282	GCA_900101115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/115/GCA_900101115.1_IMG-taxon_2667527402_annotated_assembly	-	CGMCC 1.5382
Frankineae bacterium MT45	1882833	PRJEB15986	348275	Terrabacteria group	Actinobacteria	4.2287	67.3	chromosome I:NZ_LT629697.1/LT629697.1	-	1	3854	3739	10/20/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05444157	GCA_900100325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/325/GCA_900100325.1_IMG-taxon_2690315646_annotated_assembly	-	MT45
Geodermatophilus telluris	1190417	PRJEB15697	347440	Terrabacteria group	Actinobacteria	4.80679	75.7	-	FMZF01	13	4557	4426	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660690	GCA_900102745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/745/GCA_900102745.1_IMG-taxon_2602042050_annotated_assembly	-	DSM 45421
Belnapia rosea	938405	PRJEB16285	348850	Proteobacteria	Alphaproteobacteria	6.02623	69.7	-	FMXZ01	106	5703	5424	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02927895	GCA_900104205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/205/GCA_900104205.1_IMG-taxon_2596583546_annotated_assembly	-	CGMCC 1.10758
Algoriphagus alkaliphilus	279824	PRJEB16220	348990	FCB group	Bacteroidetes/Chlorobi group	4.85379	42.6	-	FMXE01	81	4372	4179	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03080617	GCA_900103735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/735/GCA_900103735.1_IMG-taxon_2595698204_annotated_assembly	-	DSM 22703
Desulfurella multipotens	79269	PRJEB15746	347681	Proteobacteria	delta/epsilon subdivisions	1.77549	32.1	-	FMYU01	28	1870	1770	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660835	GCA_900101285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/285/GCA_900101285.1_IMG-taxon_2599185176_annotated_assembly	-	DSM 8415
Salinicoccus qingdaonensis	576118	PRJEB16053	348512	Terrabacteria group	Firmicutes	2.63362	43.2	-	FNFY01	63	2756	2571	10/20/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216216	GCA_900101075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/075/GCA_900101075.1_IMG-taxon_2667527445_annotated_assembly	-	CGMCC 1.8895
Halorientalis regularis	660518	PRJEB15830	347751	Euryarchaeota	Halobacteria	4.0322	65	-	FNBK01	55	4125	3893	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216218	GCA_900102305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/305/GCA_900102305.1_IMG-taxon_2651870125_annotated_assembly	-	IBRC-M 10760
Pseudomonas moorei	395599	PRJEB15801	347787	Proteobacteria	Gammaproteobacteria	6.54644	59.7	-	FNKJ01	4	6117	5881	10/20/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04490195	GCA_900102045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/045/GCA_900102045.1_IMG-taxon_2639762638_annotated_assembly	-	BS3775
Salimicrobium halophilum	86666	PRJEB15993	348269	Terrabacteria group	Firmicutes	3.15562	46.6	-	FNEV01	20	3271	3162	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04490247	GCA_900100295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/295/GCA_900100295.1_IMG-taxon_2636416074_annotated_assembly	-	DSM 4771
Aureimonas jatrophae	1166073	PRJEB16248	348962	Proteobacteria	Alphaproteobacteria	4.5907	67.8	-	FNIT01	25	4310	4192	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192530	GCA_900104035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/035/GCA_900104035.1_IMG-taxon_2651870106_annotated_assembly	-	"L7-484,KACC 16230,DSM 25025"
Terribacillus halophilus	361279	PRJEB19317	371339	Terrabacteria group	Firmicutes	3.4565	42.4	-	FUFU01	14	3512	3374	2/6/17	4/17/17	Scaffold	URMITE	SAMEA78858418	GCA_900162685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/685/GCA_900162685.1_PRJEB19317	-	T-h1
Tenuibacillus multivorans	237069	PRJEB16232	348978	Terrabacteria group	Firmicutes	2.95039	37.7	-	FNIG01	18	3111	2988	10/20/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216498	GCA_900103915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/915/GCA_900103915.1_IMG-taxon_2675903005_annotated_assembly	-	CGMCC 1.3442
Pseudomonas gessardii	78544	PRJNA350775	350775	Proteobacteria	Gammaproteobacteria	6.50827	60.4	-	MNPU01	149	5975	5725	2/1/17	4/17/17	Contig	Technische Universitaet Muenchen	SAMN05945975	GCA_001983165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/165/GCA_001983165.1_ASM198316v1	-	DSM 17152
Actinomyces ruminicola	332524	PRJEB16216	348993	Terrabacteria group	Actinobacteria	3.29943	69.4	-	FNHU01	38	2763	2634	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487766	GCA_900103565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/565/GCA_900103565.1_IMG-taxon_2608642100_annotated_assembly	-	KPR-7B
Eubacterium pyruvativorans	155865	PRJEB15823	347767	Terrabacteria group	Firmicutes	2.15851	54.8	-	FNBF01	58	1982	1853	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487889	GCA_900102225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/225/GCA_900102225.1_IMG-taxon_2623620515_annotated_assembly	-	i6
Succiniclasticum ruminis DSM 9236	1123323	PRJEB17250	351420	Terrabacteria group	Firmicutes	2.53989	49.7	-	FONL01	39	2353	2210	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216245	GCA_900112895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/895/GCA_900112895.1_IMG-taxon_2654588123_annotated_assembly	-	DSM 9236
Sulfitobacter litoralis	335975	PRJEB16270	348866	Proteobacteria	Alphaproteobacteria	3.6784	58.5	-	FNJD01	63	3603	3409	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488512	GCA_900103185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/185/GCA_900103185.1_IMG-taxon_2622736527_annotated_assembly	-	DSM 17584
Halanaerobium congolense	54121	PRJEB17070	351149	Terrabacteria group	Firmicutes	2.95076	33.1	-	FOHM01	56	2856	2679	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04515653	GCA_900111505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/505/GCA_900111505.1_IMG-taxon_2642422559_annotated_assembly	-	WG6
Siphonobacter aquaeclarae	563176	PRJEB16168	348910	FCB group	Bacteroidetes/Chlorobi group	6.18994	54.3	-	FNGS01	19	5041	4958	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488090	GCA_900103285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/285/GCA_900103285.1_IMG-taxon_2622736636_annotated_assembly	-	DSM 21668
Agrococcus jejuensis	399736	PRJEB15931	348245	Terrabacteria group	Actinobacteria	3.40018	72.6	chromosome I:NZ_LT629695.1/LT629695.1	-	1	3252	3162	10/20/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489720	GCA_900099705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/705/GCA_900099705.1_IMG-taxon_2634166279_annotated_assembly	-	DSM 22002
Lachnospiraceae bacterium G41	1200749	PRJEB15991	348271	Terrabacteria group	Firmicutes	2.59239	39.8	-	FNEU01	22	2422	2330	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487760	GCA_900100245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/245/GCA_900100245.1_IMG-taxon_2606217752_annotated_assembly	-	G41
Streptomyces guanduensis	310781	PRJEB16229	348981	Terrabacteria group	Actinobacteria	8.22084	73.1	-	FNIE01	33	6813	6461	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216259	GCA_900103985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/985/GCA_900103985.1_IMG-taxon_2667527439_annotated_assembly	-	CGMCC 4.2022
Yangia pacifica	311180	PRJEB17542	352031	Proteobacteria	Alphaproteobacteria	6.14366	66.3	-	FOZW01	41	5766	5611	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488050	GCA_900116195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/195/GCA_900116195.1_IMG-taxon_2619618962_annotated_assembly	-	DSM 26894
Acidovorax cattleyae	80868	PRJEB16288	348847	Proteobacteria	Betaproteobacteria	5.60924	68.6	-	FNJL01	93	5114	4734	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04489708	GCA_900104515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/515/GCA_900104515.1_IMG-taxon_2634166355_annotated_assembly	-	DSM 17101
Catalinimonas alkaloidigena	1075417	PRJEB16036	348493	FCB group	Bacteroidetes/Chlorobi group	7.10776	56.6	-	FNFO01	38	5687	5595	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421823	GCA_900100765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/765/GCA_900100765.1_IMG-taxon_2675903159_annotated_assembly	-	DSM 25186
Sporolituus thermophilus DSM 23256	1123285	PRJEB15848	347801	Terrabacteria group	Firmicutes	2.86102	52.3	-	FNBU01	49	2938	2764	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660235	GCA_900102435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/435/GCA_900102435.1_IMG-taxon_2599185233_annotated_assembly	-	DSM 23256
Sporomusa acidovorans	112900	PRJEB15783	347718	Terrabacteria group	Firmicutes	5.99646	44.6	-	FNAM01	126	5765	5419	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488499	GCA_900101845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/845/GCA_900101845.1_IMG-taxon_2622736588_annotated_assembly	-	Mol
Halogranum gelatinilyticum	660521	PRJEB16198	348922	Euryarchaeota	Halobacteria	3.77019	65.1	-	FNHL01	11	3762	3651	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487949	GCA_900103715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/715/GCA_900103715.1_IMG-taxon_2617270902_annotated_assembly	-	CGMCC 1.10119
Mesorhizobium qingshengii	1165689	PRJEB16190	348939	Proteobacteria	Alphaproteobacteria	7.06363	62.7	-	FMXM01	121	6912	6560	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02927914	GCA_900103325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/325/GCA_900103325.1_IMG-taxon_2596583656_annotated_assembly	-	CGMCC 1.12097
Mucilaginibacter pineti	1391627	PRJEB15780	347721	FCB group	Bacteroidetes/Chlorobi group	7.2066	42.9	-	FNAI01	52	6219	6076	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216464	GCA_900101875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/875/GCA_900101875.1_IMG-taxon_2671180113_annotated_assembly	-	47C3B
Halovenus aranensis	890420	PRJEB16002	348205	Euryarchaeota	Halobacteria	3.28712	61.1	-	FNFC01	56	3309	3119	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216226	GCA_900100385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/385/GCA_900100385.1_IMG-taxon_2651870124_annotated_assembly	-	IBRC-M10015
Nocardioides szechwanensis	1005944	PRJEB16227	348983	Terrabacteria group	Actinobacteria	4.22403	71	-	FNIC01	19	4117	3989	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192576	GCA_900103935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/935/GCA_900103935.1_IMG-taxon_2671180088_annotated_assembly	-	CGMCC 1.11147
Natronobacterium texcoconense	1095778	PRJEB16290	348856	Euryarchaeota	Halobacteria	4.00987	62.9	-	FNLC01	9	4026	3910	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04489842	GCA_900104065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/065/GCA_900104065.1_IMG-taxon_2636416047_annotated_assembly	-	DSM 24767
Acetanaerobacterium elongatum	258515	PRJEB16228	348982	Terrabacteria group	Firmicutes	2.91621	49	-	FNID01	73	2842	2677	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192585	GCA_900103835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/835/GCA_900103835.1_IMG-taxon_2667527408_annotated_assembly	-	CGMCC 1.5012
Psychrobacter pacificensis	112002	PRJEB15785	347716	Proteobacteria	Gammaproteobacteria	3.06258	44	-	FNAL01	61	2688	2524	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660405	GCA_900101915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/915/GCA_900101915.1_IMG-taxon_2599185216_annotated_assembly	-	DSM 23406
Thermomonospora chromogena	35622	PRJEB15964	348295	Terrabacteria group	Actinobacteria	5.98802	71	-	FNKK01	2	5219	5003	10/20/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04489764	GCA_900099985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/985/GCA_900099985.1_IMG-taxon_2634166206_annotated_assembly	-	DSM 43794
Vibrio xiamenensis	861298	PRJEB15925	348260	Proteobacteria	Gammaproteobacteria	5.50125	46.4	-	FNDD01	82	5060	4882	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488136	GCA_900100015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/015/GCA_900100015.1_IMG-taxon_2617270927_annotated_assembly	-	CGMCC 1.10228
Pelagirhabdus alkalitolerans	1612202	PRJEB15473	343906	Terrabacteria group	Firmicutes	2.5276	37.1	-	FMYI01	23	2458	2378	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421734	GCA_900096905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/096/905/GCA_900096905.1_IMG-taxon_2671180221_annotated_assembly	-	S5
Pseudonocardia oroxyli	366584	PRJEB15817	347772	Terrabacteria group	Actinobacteria	6.11157	73	-	FNBE01	53	5834	5566	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216377	GCA_900102195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/195/GCA_900102195.1_IMG-taxon_2667527404_annotated_assembly	-	CGMCC 4.3143
Geodermatophilus siccatus	1137991	PRJEB16189	348929	Terrabacteria group	Actinobacteria	5.2067	74.6	-	FNHE01	37	4885	4673	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660642	GCA_900103785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/785/GCA_900103785.1_IMG-taxon_2599185192_annotated_assembly	-	DSM 45419
Halomonas muralis	119000	PRJEB16123	348588	Proteobacteria	Gammaproteobacteria	4.13845	61.9	-	FNGI01	21	3893	3761	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05661010	GCA_900102945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/945/GCA_900102945.1_IMG-taxon_2599185144_annotated_assembly	-	DSM 14789
Halomonas taeanensis	284577	PRJEB15885	347959	Proteobacteria	Gammaproteobacteria	3.75672	62.3	-	FNCI01	31	3462	3347	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216571	GCA_900100755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/755/GCA_900100755.1_IMG-taxon_2636416175_annotated_assembly	-	BH539
Pseudomonas chengduensis	489632	PRJEB15682	347455	Proteobacteria	Gammaproteobacteria	5.41306	62.3	-	FMZQ01	43	5184	5002	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216576	GCA_900102635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/635/GCA_900102635.1_IMG-taxon_2663762777_annotated_assembly	-	DSM 26382
Pseudomonas guguanensis	1198456	PRJEB16284	348851	Proteobacteria	Gammaproteobacteria	5.08417	64.2	-	FNJJ01	26	4651	4511	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216213	GCA_900104265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/265/GCA_900104265.1_IMG-taxon_2663762796_annotated_assembly	-	JCM 18416
Kriegella aquimaris	192904	PRJEB16171	348948	FCB group	Bacteroidetes/Chlorobi group	6.05724	39.6	-	FNGV01	48	4917	4790	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488514	GCA_900103215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/215/GCA_900103215.1_IMG-taxon_2622736525_annotated_assembly	-	DSM 19886
Roseospirillum parvum	83401	PRJEB15914	348218	Proteobacteria	Alphaproteobacteria	3.49721	69.9	-	FNCV01	37	3075	2991	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421742	GCA_900100455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/455/GCA_900100455.1_IMG-taxon_2675903017_annotated_assembly	-	930I
Desulfuromonas thiophila	57664	PRJEB15793	347708	Proteobacteria	delta/epsilon subdivisions	2.78997	60.8	-	FNAQ01	39	2516	2392	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05661003	GCA_900101955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/955/GCA_900101955.1_IMG-taxon_2602042025_annotated_assembly	-	DSM 8987
Mucilaginibacter gossypii	551996	PRJEB15883	347961	FCB group	Bacteroidetes/Chlorobi group	7.10918	42.8	-	FNCG01	45	6084	5905	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192573	GCA_900100945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/945/GCA_900100945.1_IMG-taxon_2651870011_annotated_assembly	-	Gh-67
Eubacterium oxidoreducens	1732	PRJEB16259	348877	Terrabacteria group	Firmicutes	2.91229	39.9	-	FMXR01	33	2691	2569	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910417	GCA_900104415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/415/GCA_900104415.1_IMG-taxon_2593339221_annotated_assembly	-	DSM 3217
Sediminibacillus albus	407036	PRJEB16031	348498	Terrabacteria group	Firmicutes	3.56508	41.3	-	FNFL01	14	3528	3391	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216243	GCA_900101125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/125/GCA_900101125.1_IMG-taxon_2675902963_annotated_assembly	-	CGMCC 1.6502
Aneurinibacillus thermoaerophilus	143495	PRJEB15926	348259	Terrabacteria group	Firmicutes	3.65853	44.6	-	FNDE01	103	3775	3527	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04489735	GCA_900099925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/925/GCA_900099925.1_IMG-taxon_2634166356_annotated_assembly	-	L 420-91
Alkalibacterium thalassium	426701	PRJEB16030	348499	Terrabacteria group	Firmicutes	2.36496	42.3	-	FNFK01	124	2308	2137	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488098	GCA_900101165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/165/GCA_900101165.1_IMG-taxon_2619619006_annotated_assembly	-	DSM 19181
Alteribacillus bidgolensis	930129	PRJEB15948	348239	Terrabacteria group	Firmicutes	4.644	38.8	-	FNDU01	58	4596	4292	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216352	GCA_900099745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/745/GCA_900099745.1_IMG-taxon_2654587895_annotated_assembly	-	"P4B,CCM 7963,CECT 7998,DSM 25260,IBRC-M 10614,KCTC 13821"
Halomonas arcis	416873	PRJEB16235	348975	Proteobacteria	Gammaproteobacteria	4.14213	55.9	-	FNII01	38	3898	3709	10/20/16	7/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487951	GCA_900103865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/865/GCA_900103865.1_IMG-taxon_2617270787_annotated_assembly	-	CGMCC 1.6494
Thalassobaculum litoreum DSM 18839	1123362	PRJEB15850	347793	Proteobacteria	Alphaproteobacteria	5.36337	67.1	-	FNBW01	51	5038	4881	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660686	GCA_900102465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/465/GCA_900102465.1_IMG-taxon_2599185271_annotated_assembly	-	DSM 18839
Filomicrobium insigne	418854	PRJEB16269	348867	Proteobacteria	Alphaproteobacteria	3.84719	57.4	-	FNJC01	10	3589	3492	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488061	GCA_900104305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/305/GCA_900104305.1_IMG-taxon_2617270918_annotated_assembly	-	CGMCC 1.6497
Niabella drilacis	1285928	PRJEB15740	347677	FCB group	Bacteroidetes/Chlorobi group	6.099	47.8	-	FMZO01	45	5227	5113	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487894	GCA_900101395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/395/GCA_900101395.1_IMG-taxon_2619619035_annotated_assembly	-	DSM 25811
Dolosicoccus paucivorans	84521	PRJEB15977	348293	Terrabacteria group	Firmicutes	1.7596	37.9	-	FNEL01	107	1751	1605	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487994	GCA_900100125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/125/GCA_900100125.1_IMG-taxon_2622736585_annotated_assembly	-	DSM 15742
Alloactinosynnema iranicum	1271860	PRJEB15760	347739	Terrabacteria group	Actinobacteria	6.57876	70.8	-	FMZZ01	39	6053	5784	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216174	GCA_900101685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/685/GCA_900101685.1_IMG-taxon_2651870117_annotated_assembly	-	IBRC-M 10403
Flavobacterium noncentrifugens	1128970	PRJEB15997	348265	FCB group	Bacteroidetes/Chlorobi group	4.03262	40.8	-	FNEZ01	19	3644	3556	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487935	GCA_900100375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/375/GCA_900100375.1_IMG-taxon_2619618994_annotated_assembly	-	CGMCC 1.10076
Virgibacillus salinus	553311	PRJEB15845	347804	Terrabacteria group	Firmicutes	3.75845	37.4	-	FNKD01	9	3733	3609	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216231	GCA_900102415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/415/GCA_900102415.1_IMG-taxon_2671180171_annotated_assembly	-	CGMCC 1.10449
Desulfosporosinus hippei DSM 8344	1121419	PRJEB15900	347968	Terrabacteria group	Firmicutes	4.93987	41.4	-	FNCP01	73	4600	4333	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05443529	GCA_900100785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/785/GCA_900100785.1_IMG-taxon_2675903225_annotated_assembly	-	DSM 8344
Halobacillus aidingensis	240303	PRJEB16261	348875	Terrabacteria group	Firmicutes	4.19184	43.6	-	FNIZ01	45	4245	4103	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421677	GCA_900104185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/185/GCA_900104185.1_IMG-taxon_2675903131_annotated_assembly	-	CGMCC 1.3703
Lechevalieria fradiae	200378	PRJEB15878	347944	Terrabacteria group	Actinobacteria	8.50803	70.5	-	FNCC01	43	7956	7724	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216553	GCA_900100955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/955/GCA_900100955.1_IMG-taxon_2663762758_annotated_assembly	-	CGMCC 4.3506
Natronincola ferrireducens	393762	PRJEB16039	348490	Terrabacteria group	Firmicutes	3.10708	35	-	FNFP01	24	2957	2852	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05660472	GCA_900100845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/845/GCA_900100845.1_IMG-taxon_2599185225_annotated_assembly	-	DSM 18346
Pseudomonas guariconensis	1288410	PRJEB15687	347450	Proteobacteria	Gammaproteobacteria	5.07903	62.6	-	FMYX01	29	4703	4562	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216185	GCA_900102675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/675/GCA_900102675.1_IMG-taxon_2663763604_annotated_assembly	-	LMG 27394
Pseudomonas benzenivorans	556533	PRJEB15910	348212	Proteobacteria	Gammaproteobacteria	5.74314	65.2	-	FNCT01	44	5274	5055	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216603	GCA_900100495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/495/GCA_900100495.1_IMG-taxon_2663762779_annotated_assembly	-	DSM 8628
Halopelagius longus	1236180	PRJEB15892	347953	Euryarchaeota	Halobacteria	3.87175	65.7	-	FNKQ01	9	3777	3664	10/20/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216278	GCA_900100875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/875/GCA_900100875.1_IMG-taxon_2671180169_annotated_assembly	-	CGMCC 1.12397
Pseudomonas reinekei	395598	PRJEB16255	348881	Proteobacteria	Gammaproteobacteria	6.31269	59.1	chromosome I:NZ_LT629709.1/LT629709.1	-	1	5814	5556	10/20/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04490202	GCA_900104125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/125/GCA_900104125.1_IMG-taxon_2639762506_annotated_assembly	-	BS3776
Pelagibacterium luteolum	440168	PRJEB15902	347966	Proteobacteria	Alphaproteobacteria	4.29682	60.4	-	FNCS01	50	4256	4065	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487974	GCA_900100665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/665/GCA_900100665.1_IMG-taxon_2617270882_annotated_assembly	-	CGMCC 1.10267
Flavobacteriaceae bacterium MAR_2010_188	1250295	PRJEB16253	348883	FCB group	Bacteroidetes/Chlorobi group	3.81766	36.9	chromosome I:NZ_LT629302.1/LT629302.1	-	1	3324	3225	10/20/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN03097699	GCA_900104375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/375/GCA_900104375.1_IMG-taxon_2667527226_annotated_assembly	-	Mar_2010_188
Tessaracoccus oleiagri	686624	PRJEB16163	348915	Terrabacteria group	Actinobacteria	3.15622	69.7	-	FNGP01	11	2942	2851	10/20/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488242	GCA_900103275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/275/GCA_900103275.1_IMG-taxon_2617270936_annotated_assembly	-	CGMCC 1.9159
Allisonella histaminiformans	209880	PRJEB16213	348996	Terrabacteria group	Firmicutes	1.70055	46.4	-	FMXA01	41	1620	1526	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910343	GCA_900103425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/425/GCA_900103425.1_IMG-taxon_2595698240_annotated_assembly	-	DSM 15230
Raineyella antarctica	1577474	PRJEB14615	327067	Terrabacteria group	Actinobacteria	3.76025	70.2	-	FMYF01	36	3441	3309	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216453	GCA_900092135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/135/GCA_900092135.1_IMG-taxon_2651870304_annotated_assembly	-	LZ-22
Alloactinosynnema album	504798	PRJEB15949	348238	Terrabacteria group	Actinobacteria	7.27306	69.7	-	FNDV01	29	6573	6350	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421871	GCA_900099755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/755/GCA_900099755.1_IMG-taxon_2675903054_annotated_assembly	-	CPCC 201030
Actinopolyspora mzabensis	995066	PRJEB16034	348495	Terrabacteria group	Actinobacteria	5.00425	67.7	-	FNFM01	25	4452	4251	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487820	GCA_900101095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/095/GCA_900101095.1_IMG-taxon_2619619027_annotated_assembly	-	DSM 45460
Pedobacter terrae	405671	PRJEB15884	347960	FCB group	Bacteroidetes/Chlorobi group	5.7551	38.8	-	FNCH01	63	4906	4780	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421827	GCA_900100705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/705/GCA_900100705.1_IMG-taxon_2675903222_annotated_assembly	-	DSM 17933
Citreicella marina	555512	PRJEB15971	348289	Proteobacteria	Alphaproteobacteria	5.6116	66.5	-	FNEJ01	111	5405	5188	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487993	GCA_900100085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/085/GCA_900100085.1_IMG-taxon_2615840707_annotated_assembly	-	DSM 26424
Pedobacter soli	390242	PRJEB15720	347695	FCB group	Bacteroidetes/Chlorobi group	6.00642	40.5	-	FMZH01	30	5009	4899	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488024	GCA_900101435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/435/GCA_900101435.1_IMG-taxon_2622736512_annotated_assembly	-	DSM 18609
Pseudomonas syringae pv. actinidiae ICMP 9853	1104678	PRJNA74963	74963	Proteobacteria	Gammaproteobacteria	6.50752	58.6608	chromosome:NZ_CP018202.1/CP018202.1; plasmid p9853_A:NZ_CP018203.1/CP018203.1; plasmid p9853_B:NZ_CP018204.1/CP018204.1	-	3	6209	5625	11/28/16	3/29/17	Complete Genome	University of Otago	SAMN02471921	GCA_000344335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/335/GCA_000344335.2_ASM34433v2	-	ICMP 9853
Dendrosporobacter quercicolus	146817	PRJEB16182	348936	Terrabacteria group	Firmicutes	4.1305	48.9	-	FNHB01	28	3823	3665	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488502	GCA_900104455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/455/GCA_900104455.1_IMG-taxon_2622736508_annotated_assembly	-	DSM 1736
Pedobacter ruber	990371	PRJEB16193	348927	FCB group	Bacteroidetes/Chlorobi group	4.27928	38.9	-	FNHH01	76	3668	3603	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421813	GCA_900103545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/545/GCA_900103545.1_IMG-taxon_2675903227_annotated_assembly	-	DSM 24536
Propionivibrio dicarboxylicus	83767	PRJEB15917	348215	Proteobacteria	Betaproteobacteria	4.53468	61.3	-	FNCY01	44	4156	4034	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660652	GCA_900099695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/695/GCA_900099695.1_IMG-taxon_2599185173_annotated_assembly	-	DSM 5885
Fervidobacterium changbaicum	310769	PRJEB15937	348249	Thermotogae	Thermotogae	2.18403	40.7	-	FNDL01	52	2051	1904	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488510	GCA_900100515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/515/GCA_900100515.1_IMG-taxon_2619619036_annotated_assembly	-	DSM 17883
Nonomuraea jiangxiensis	633440	PRJEB15935	348251	Terrabacteria group	Actinobacteria	11.8118	70.6	-	FNDJ01	68	10758	10232	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421869	GCA_900099965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/965/GCA_900099965.1_IMG-taxon_2675903065_annotated_assembly	-	CGMCC 4.6533
Megasphaera paucivorans	349095	PRJEB16204	348954	Terrabacteria group	Firmicutes	2.91228	40.2	-	FNHQ01	76	2773	2571	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05660299	GCA_900103535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/535/GCA_900103535.1_IMG-taxon_2596583540_annotated_assembly	-	DSM 16981
Actinopolyspora saharensis	995062	PRJEB15893	347952	Terrabacteria group	Actinobacteria	4.68223	69.5	-	FNKO01	2	4142	3961	10/20/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04489718	GCA_900100925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/925/GCA_900100925.1_IMG-taxon_2634166628_annotated_assembly	-	DSM 45459
Paenibacillus typhae	1174501	PRJEB15952	348227	Terrabacteria group	Firmicutes	6.74045	51.6	-	FNDX01	92	5983	5735	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216192	GCA_900099765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/765/GCA_900099765.1_IMG-taxon_2667527451_annotated_assembly	-	CGMCC 1.11012
Pseudoruegeria lutimaris	571298	PRJEB15972	348288	Proteobacteria	Alphaproteobacteria	5.81151	62.3	-	FNEK01	193	5663	5265	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488026	GCA_900099935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/935/GCA_900099935.1_IMG-taxon_2622736598_annotated_assembly	-	DSM 25294
Pseudomonas delhiensis	366289	PRJEB21425	391643	Proteobacteria	Gammaproteobacteria	6.72743	68.1	-	FZPC01	81	5942	5781	7/13/17	7/21/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06295949	GCA_900187975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/975/GCA_900187975.1_IMG-taxon_2706795031_annotated_assembly	-	RLD-1
Nakamurella panacisegetis	1090615	PRJEB16266	348870	Terrabacteria group	Actinobacteria	5.01397	69	chromosome I:NZ_LT629710.1/LT629710.1	-	1	4506	4350	10/20/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04515671	GCA_900104535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/535/GCA_900104535.1_IMG-taxon_2636416005_annotated_assembly	-	"P4-7,KCTC 19426,CECT 7604"
Geotoga petraea	28234	PRJEB15679	347458	Thermotogae	Thermotogae	2.16633	29.5	-	FMYV01	17	2096	2022	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488588	GCA_900102615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/615/GCA_900102615.1_IMG-taxon_2639762660_annotated_assembly	-	WG14
Arthrobacter subterraneus	335973	PRJEB15947	348240	Terrabacteria group	Actinobacteria	3.87138	65	-	FNDT01	64	3643	3466	10/20/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488693	GCA_900099735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/735/GCA_900099735.1_IMG-taxon_2642422544_annotated_assembly	-	NP_1H
Acidovorax valerianellae	187868	PRJEB15685	347452	Proteobacteria	Betaproteobacteria	5.25708	65.6	-	FMZC01	54	4706	4543	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192589	GCA_900102625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/625/GCA_900102625.1_IMG-taxon_2615840716_annotated_assembly	-	DSM 16619
Streptomyces jietaisiensis	235987	PRJEB15804	347784	Terrabacteria group	Actinobacteria	7.68126	72.7	-	FNAX01	47	6779	6470	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216260	GCA_900102095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/095/GCA_900102095.1_IMG-taxon_2667527442_annotated_assembly	-	CGMCC 4.1859
Glycomyces sambucus	380244	PRJEB16113	348598	Terrabacteria group	Actinobacteria	5.60448	71.8	-	FNGF01	16	5089	4945	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216298	GCA_900102815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/815/GCA_900102815.1_IMG-taxon_2671180087_annotated_assembly	-	CGMCC 4.3147
Acinetobacter boissieri	1219383	PRJEB15477	343902	Proteobacteria	Gammaproteobacteria	2.69021	38	-	FMYL01	29	2551	2441	10/20/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421733	GCA_900096955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/096/955/GCA_900096955.1_IMG-taxon_2671180229_annotated_assembly	-	ANC 4422
Chryseobacterium jejuense	445960	PRJEB15966	348303	FCB group	Bacteroidetes/Chlorobi group	5.16818	35.3	-	FNEG01	20	4593	4472	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421542	GCA_900100075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/075/GCA_900100075.1_IMG-taxon_2684623012_annotated_assembly	-	DSM 19299
Geodermatophilus soli	1052260	PRJEB16247	348963	Terrabacteria group	Actinobacteria	4.7581	74.2	-	FNIR01	25	4623	4463	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660199	GCA_900103975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/975/GCA_900103975.1_IMG-taxon_2599185180_annotated_assembly	-	DSM 45843
Sulfitobacter delicatus	218672	PRJEB15839	347752	Proteobacteria	Alphaproteobacteria	3.93608	60.8	-	FNBP01	34	3908	3753	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04489759	GCA_900102535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/535/GCA_900102535.1_IMG-taxon_2634166359_annotated_assembly	-	DSM 16477
Natribacillus halophilus	549003	PRJEB15981	348280	Terrabacteria group	Firmicutes	3.30241	46.8	-	FNEN01	47	3421	3253	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488123	GCA_900100185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/185/GCA_900100185.1_IMG-taxon_2634166325_annotated_assembly	-	DSM 21771
Chromobacterium amazonense	1382803	PRJNA342530	342530	Proteobacteria	Betaproteobacteria	4.01019	62.6	-	MKCR01	35	3846	3625	10/27/16	4/13/17	Contig	USDA-ARS	SAMN05761787	GCA_001855565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/565/GCA_001855565.1_ASM185556v1	-	DSM 26508
Corynebacterium mycetoides	38302	PRJEB16183	348935	Terrabacteria group	Actinobacteria	2.26647	66.6	chromosome I:NZ_LT629700.1/LT629700.1	-	1	2179	2031	10/20/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04488535	GCA_900103625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/625/GCA_900103625.1_IMG-taxon_2634166344_annotated_assembly	-	DSM 20632
Pseudomonas seleniipraecipitans	640205	PRJEB15835	347756	Proteobacteria	Gammaproteobacteria	4.54616	61.5	-	FNBM01	18	4239	4124	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216381	GCA_900102335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/335/GCA_900102335.1_IMG-taxon_2671180043_annotated_assembly	-	LMG 25475
Desulfovibrio legallii	571438	PRJEB15851	347792	Proteobacteria	delta/epsilon subdivisions	2.70443	64.8	-	FNBX01	36	2344	2224	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192586	GCA_900102485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/485/GCA_900102485.1_IMG-taxon_2651870316_annotated_assembly	-	KHC7
Facklamia miroungae	120956	PRJEB15889	347965	Terrabacteria group	Firmicutes	2.02829	35.6	-	FNCK01	22	1945	1829	10/20/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421791	GCA_900100775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/775/GCA_900100775.1_IMG-taxon_2675903695_annotated_assembly	-	ATCC BAA-466
Salinimicrobium catena	390640	PRJEB16114	348597	FCB group	Bacteroidetes/Chlorobi group	3.26146	43.8	-	FNGG01	26	3009	2924	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488140	GCA_900102915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/915/GCA_900102915.1_IMG-taxon_2617270763_annotated_assembly	-	CGMCC 1.6101
Pricia antarctica	641691	PRJEB15789	347712	FCB group	Bacteroidetes/Chlorobi group	4.852	43.8	-	FNAO01	52	4121	3981	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421636	GCA_900101815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/815/GCA_900101815.1_IMG-taxon_2684622891_annotated_assembly	-	DSM 23421
Cryobacterium flavum	1424659	PRJEB16226	348984	Terrabacteria group	Actinobacteria	4.04084	64.7	-	FNIB01	42	3883	3682	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216368	GCA_900103805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/805/GCA_900103805.1_IMG-taxon_2663762753_annotated_assembly	-	CGMCC 1.11215
Bacteroidales bacterium KHT7	1855373	PRJEB15840	347799	FCB group	Bacteroidetes/Chlorobi group	3.78536	45.3	-	FNBQ01	61	3155	2995	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216518	GCA_900102385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/385/GCA_900102385.1_IMG-taxon_2654588178_annotated_assembly	-	KHT7
Quadrisphaera sp. DSM 44207	1881057	PRJEB15738	347688	Terrabacteria group	Actinobacteria	3.19564	76.6	-	FNKA01	4	3023	2885	10/20/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428996	GCA_900101335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/335/GCA_900101335.1_IMG-taxon_2687453777_annotated_assembly	-	DSM 44207
Clostridium gasigenes	94869	PRJEB16291	348896	Terrabacteria group	Firmicutes	4.05651	28.7	-	FNJM01	43	3880	3661	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488529	GCA_900104115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/115/GCA_900104115.1_IMG-taxon_2634166322_annotated_assembly	-	DSM 12272
Jeotgalicoccus halophilus	586411	PRJEB16026	348503	Terrabacteria group	Firmicutes	2.27731	40	-	FNFI01	27	2346	2230	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216187	GCA_900101065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/065/GCA_900101065.1_IMG-taxon_2663762720_annotated_assembly	-	CGMCC 1.8911
Geodermatophilus brasiliensis	333142	PRJEB15881	347963	Terrabacteria group	Actinobacteria	4.45159	74.8	-	FNCF01	14	4344	4216	10/20/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05660324	GCA_900100695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/695/GCA_900100695.1_IMG-taxon_2602042031_annotated_assembly	-	DSM 44526
Lutimaribacter saemankumensis	490829	PRJEB15960	348299	Proteobacteria	Alphaproteobacteria	3.77251	62.9	-	FNEB01	49	3769	3635	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421850	GCA_900100005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/005/GCA_900100005.1_IMG-taxon_2675903213_annotated_assembly	-	DSM 28010
Rhizobiales bacterium GAS113	1884352	PRJEB16241	348969	Proteobacteria	Alphaproteobacteria	10.2866	64.3	-	FNLG01	4	9472	9052	10/20/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05519103	GCA_900103895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/895/GCA_900103895.1_IMG-taxon_2693430035_annotated_assembly	-	GAS113
Rhodospira trueperi	69960	PRJEB15792	347709	Proteobacteria	Alphaproteobacteria	4.21133	67	-	FNAP01	50	3690	3576	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421720	GCA_900101965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/965/GCA_900101965.1_IMG-taxon_2675903020_annotated_assembly	-	ATCC 700224
Chryseobacterium taihuense	1141221	PRJEB16185	348933	FCB group	Bacteroidetes/Chlorobi group	3.40302	35.2	-	FNHD01	33	3217	3069	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216273	GCA_900103755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/755/GCA_900103755.1_IMG-taxon_2663762742_annotated_assembly	-	CGMCC 1.10941
Natronorubrum texcoconense	1095776	PRJEB16004	348203	Euryarchaeota	Halobacteria	4.64179	63.6	-	FNFE01	11	4476	4344	10/20/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04515672	GCA_900100335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/335/GCA_900100335.1_IMG-taxon_2636416021_annotated_assembly	-	"B4,CECT 8067,JCM 17497"
Microbacterium pygmaeum	370764	PRJEB15898	347947	Terrabacteria group	Actinobacteria	3.66867	68.8	chromosome I:NZ_LT629692.1/LT629692.1	-	1	3493	3388	10/20/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489810	GCA_900100885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/885/GCA_900100885.1_IMG-taxon_2634166516_annotated_assembly	-	DSM 23142
Streptomyces indicus	417292	PRJEB16005	348202	Terrabacteria group	Actinobacteria	8.2282	71.4	-	FNFF01	45	7439	7151	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421806	GCA_900100315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/315/GCA_900100315.1_IMG-taxon_2675903130_annotated_assembly	-	CGMCC 4.5727
Streptomyces wuyuanensis	1196353	PRJEB16195	348925	Terrabacteria group	Actinobacteria	8.03956	71.9	-	FNHI01	52	7229	6774	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444921	GCA_900103455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/455/GCA_900103455.1_IMG-taxon_2675903062_annotated_assembly	-	CGMCC 4.7042
Bauldia litoralis	665467	PRJEB16274	348862	Proteobacteria	Alphaproteobacteria	5.09455	65.8	-	FMXQ01	29	4785	4674	10/20/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02982931	GCA_900104485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/485/GCA_900104485.1_IMG-taxon_2597490370_annotated_assembly	-	ATCC 35022
Riemerella columbipharyngis	1071918	PRJEB15796	347705	FCB group	Bacteroidetes/Chlorobi group	2.13695	36.6	-	FNAS01	41	2066	1950	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421544	GCA_900101995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/995/GCA_900101995.1_IMG-taxon_2675903161_annotated_assembly	-	DSM 24015
Sarcina sp. DSM 11001	1798184	PRJEB16054	348511	Terrabacteria group	Firmicutes	4.15159	50.8	-	FNFZ01	76	3334	3107	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487833	GCA_900101015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/015/GCA_900101015.1_IMG-taxon_2608642105_annotated_assembly	-	DSM 11001
Paraburkholderia sediminicola	458836	PRJEB16249	348961	Proteobacteria	Betaproteobacteria	7.3116	63.6	-	FNIU01	114	6709	6363	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192547	GCA_900104005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/005/GCA_900104005.1_IMG-taxon_2654588104_annotated_assembly	-	LMG 24238
Flavobacterium omnivorum	178355	PRJEB15921	348254	FCB group	Bacteroidetes/Chlorobi group	3.80836	34.3	-	FNDB01	40	3317	3158	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488062	GCA_900099915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/915/GCA_900099915.1_IMG-taxon_2617270789_annotated_assembly	-	CGMCC 1.2747
Bhargavaea beijingensis	426756	PRJEB15795	347706	Terrabacteria group	Firmicutes	2.98856	54.1	-	FNAR01	43	2989	2881	10/20/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488126	GCA_900101985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/985/GCA_900101985.1_IMG-taxon_2619618820_annotated_assembly	-	CGMCC 1.6762
Halomonas pantelleriensis	48727	PRJEB16122	348589	Proteobacteria	Gammaproteobacteria	4.40219	63.9	-	FNGH01	40	4091	3933	10/20/16	7/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192555	GCA_900102875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/875/GCA_900102875.1_IMG-taxon_2654587879_annotated_assembly	-	AAP
Loktanella pyoseonensis	521013	PRJEB15799	347702	Proteobacteria	Alphaproteobacteria	3.91177	70.3	-	FNAT01	20	3728	3637	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488567	GCA_900102015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/015/GCA_900102015.1_IMG-taxon_2636416063_annotated_assembly	-	DSM 21424
Auraticoccus monumenti	675864	PRJEB15766	347733	Terrabacteria group	Actinobacteria	4.46179	73.1	chromosome I:NZ_LT629688.1/LT629688.1	-	1	4126	4004	10/20/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489747	GCA_900101785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/785/GCA_900101785.1_IMG-taxon_2636415982_annotated_assembly	-	MON 2.2
Alteribacillus persepolensis	568899	PRJEB15936	348250	Terrabacteria group	Firmicutes	3.6191	41.6	-	FNDK01	65	3584	3462	10/20/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05192534	GCA_900099605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/605/GCA_900099605.1_IMG-taxon_2654588171_annotated_assembly	-	DSM 21632
Microbulbifer yueqingensis	658219	PRJEB16007	348200	Proteobacteria	Gammaproteobacteria	3.66485	62	-	FNFH01	14	3226	3145	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216212	GCA_900100355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/355/GCA_900100355.1_IMG-taxon_2667528184_annotated_assembly	-	CGMCC 1.10658
Chryseobacterium soldanellicola	311333	PRJEB15975	348285	FCB group	Bacteroidetes/Chlorobi group	4.13642	35.4	-	FNKL01	9	3737	3636	10/20/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421664	GCA_900100115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/115/GCA_900100115.1_IMG-taxon_2684622906_annotated_assembly	-	DSM 17072
Fictibacillus solisalsi	459525	PRJEB16218	348991	Terrabacteria group	Firmicutes	4.79761	44	-	FNHW01	14	4917	4763	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488137	GCA_900103485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/485/GCA_900103485.1_IMG-taxon_2619618871_annotated_assembly	-	CGMCC 1.6854
Halarsenatibacter silvermanii	321763	PRJEB16158	348920	Terrabacteria group	Firmicutes	2.71864	45.1	-	FNGO01	71	2605	2490	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488692	GCA_900103135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/135/GCA_900103135.1_IMG-taxon_2639762507_annotated_assembly	-	SLAS-1
Ruegeria marina	639004	PRJEB15754	347664	Proteobacteria	Alphaproteobacteria	4.99542	62.8	-	FMZV01	51	4791	4593	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488239	GCA_900101475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/475/GCA_900101475.1_IMG-taxon_2617270884_annotated_assembly	-	CGMCC 1.9108
Chryseobacterium hungaricum	454006	PRJEB15827	347763	FCB group	Bacteroidetes/Chlorobi group	3.96022	36.5	-	FNBH01	12	3603	3522	10/20/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421825	GCA_900102265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/265/GCA_900102265.1_IMG-taxon_2684622908_annotated_assembly	-	DSM 19684
Leuconostocaceae bacterium R-53105	1855370	PRJEB15472	343907	Terrabacteria group	Firmicutes	1.58945	40.9	-	FMYJ01	35	1625	1508	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216341	GCA_900096935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/096/935/GCA_900096935.1_IMG-taxon_2615840612_annotated_assembly	-	R-53105
Myxococcus virescens	83456	PRJEB15777	347723	Proteobacteria	delta/epsilon subdivisions	9.24072	69.2	-	FNAJ01	57	7597	7270	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488504	GCA_900101905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/905/GCA_900101905.1_IMG-taxon_2619619029_annotated_assembly	-	DSM 2260
Carnobacterium viridans	174587	PRJEB15693	347444	Terrabacteria group	Firmicutes	2.76233	35.2	-	FNJW01	9	2720	2552	10/20/16	7/28/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487752	GCA_900102725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/725/GCA_900102725.1_IMG-taxon_2634166280_annotated_assembly	-	MPL-11
Ruminococcaceae bacterium FB2012	1520817	PRJEB16281	348854	Terrabacteria group	Firmicutes	3.75824	51.1	-	FMXS01	52	3316	3167	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910317	GCA_900104495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/495/GCA_900104495.1_IMG-taxon_2596583597_annotated_assembly	-	FB2012
Bacillus lonarensis	1464122	PRJEB15470	343909	Terrabacteria group	Firmicutes	2.58221	43.3	-	FMYM01	25	2590	2474	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421737	GCA_900096965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/096/965/GCA_900096965.1_IMG-taxon_2671180223_annotated_assembly	-	25nlg
Haloarchaeobius iranensis	996166	PRJEB16222	348988	Euryarchaeota	Halobacteria	3.76861	67.3	-	FNIA01	73	3786	3568	10/20/16	7/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192554	GCA_900103505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/505/GCA_900103505.1_IMG-taxon_2651870127_annotated_assembly	-	"EB21,IBRC-M 10013,KCTC 4048"
Maricaulis salignorans	144026	PRJEB16192	348928	Proteobacteria	Alphaproteobacteria	3.11777	62.9	-	FNHG01	37	2979	2901	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488568	GCA_900103475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/475/GCA_900103475.1_IMG-taxon_2634166316_annotated_assembly	-	DSM 16077
Desulfovibrio ferrireducens	246191	PRJEB16055	348510	Proteobacteria	delta/epsilon subdivisions	3.87285	42.8	-	FNGA01	12	3452	3351	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660337	GCA_900101105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/105/GCA_900101105.1_IMG-taxon_2599185335_annotated_assembly	-	DSM 16995
Ferrimonas sediminum	718193	PRJEB15979	348291	Proteobacteria	Gammaproteobacteria	4.37538	57.3	-	FNEM01	45	3984	3856	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488540	GCA_900100175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/175/GCA_900100175.1_IMG-taxon_2634166324_annotated_assembly	-	DSM 23317
Nocardioides lianchengensis	1045774	PRJEB15729	347696	Terrabacteria group	Actinobacteria	5.29557	72.7	-	FMZM01	26	5052	4915	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421872	GCA_900101465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/465/GCA_900101465.1_IMG-taxon_2675903056_annotated_assembly	-	CGMCC 4.6858
Paracoccus isoporae	591205	PRJEB15776	347724	Proteobacteria	Alphaproteobacteria	3.52347	65.8	-	FNAH01	31	3382	3272	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421538	GCA_900101865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/865/GCA_900101865.1_IMG-taxon_2675903152_annotated_assembly	-	DSM 22220
Winogradskyella thalassocola	262004	PRJEB15919	348213	FCB group	Bacteroidetes/Chlorobi group	4.57315	33.3	-	FNCZ01	30	3961	3859	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04489796	GCA_900099995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/995/GCA_900099995.1_IMG-taxon_2634166307_annotated_assembly	-	DSM 15363
Myroides phaeus	702745	PRJEB15942	348235	FCB group	Bacteroidetes/Chlorobi group	2.96704	33.2	-	FNDQ01	58	2609	2482	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421818	GCA_900099675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/675/GCA_900099675.1_IMG-taxon_2675903217_annotated_assembly	-	DSM 23313
Pseudomonas oryzae	1392877	PRJEB16377	349319	Proteobacteria	Gammaproteobacteria	4.64219	67.4	chromosome I:NZ_LT629751.1/LT629751.1	-	1	4243	4073	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216221	GCA_900104805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/805/GCA_900104805.1_IMG-taxon_2667527434_annotated_assembly	-	KCTC 32247
Pseudarthrobacter equi	728066	PRJEB16401	349411	Terrabacteria group	Actinobacteria	4.45918	66.1	chromosome I:NZ_LT629779.1/LT629779.1	-	1	4050	3919	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489743	GCA_900105535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/535/GCA_900105535.1_IMG-taxon_2634166282_annotated_assembly	-	IMMIB L-1606
Pseudomonas prosekii	1148509	PRJEB16427	349347	Proteobacteria	Gammaproteobacteria	6.09206	59.6	chromosome I:NZ_LT629762.1/LT629762.1	-	1	5495	5300	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216222	GCA_900105155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/155/GCA_900105155.1_IMG-taxon_2663762789_annotated_assembly	-	LMG 26867
Friedmanniella luteola	546871	PRJEB16394	349302	Terrabacteria group	Actinobacteria	4.71761	73.7	chromosome I:NZ_LT629749.1/LT629749.1	-	1	4398	4250	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04488543	GCA_900105065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/065/GCA_900105065.1_IMG-taxon_2630969010_annotated_assembly	-	DSM 21741
Arcanobacterium phocae	131112	PRJEB16468	349388	Terrabacteria group	Actinobacteria	1.99834	50	chromosome I:NZ_LT629804.1/LT629804.1	-	1	1801	1708	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489737	GCA_900105865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/865/GCA_900105865.1_IMG-taxon_2634166335_annotated_assembly	-	DSM 10002
Mucilaginibacter mallensis	652787	PRJEB16429	349355	FCB group	Bacteroidetes/Chlorobi group	6.01406	41.3	chromosome I:NZ_LT629740.1/LT629740.1	-	1	4989	4896	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216490	GCA_900105165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/165/GCA_900105165.1_IMG-taxon_2667528181_annotated_assembly	-	MP1X4
Microlunatus soli	630515	PRJEB16363	349280	Terrabacteria group	Actinobacteria	6.73301	67.4	chromosome I:NZ_LT629772.1/LT629772.1	-	1	6131	5982	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489812	GCA_900105385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/385/GCA_900105385.1_IMG-taxon_2636416048_annotated_assembly	-	DSM 21800
Pseudomonas sihuiensis	1274359	PRJEB16462	349394	Proteobacteria	Gammaproteobacteria	5.47637	62.5	chromosome I:NZ_LT629797.1/LT629797.1	-	1	5121	4955	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216363	GCA_900106015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/015/GCA_900106015.1_IMG-taxon_2667527235_annotated_assembly	-	KCTC 32246
Actinomyces radingae	131110	PRJEB16500	349431	Terrabacteria group	Actinobacteria	2.43029	58.9	chromosome I:NZ_LT629792.1/LT629792.1	-	1	2140	2046	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489714	GCA_900106055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/055/GCA_900106055.1_IMG-taxon_2630968294_annotated_assembly	-	DSM 9169
Actinopolymorpha singaporensis	117157	PRJEB16373	349323	Terrabacteria group	Actinobacteria	6.40367	70.6	chromosome I:NZ_LT629732.1/LT629732.1	-	1	5733	5484	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489717	GCA_900104745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/745/GCA_900104745.1_IMG-taxon_2636416006_annotated_assembly	-	DSM 22024
Pseudomonas litoralis	797277	PRJEB16410	349363	Proteobacteria	Gammaproteobacteria	3.98794	58.5	chromosome I:NZ_LT629748.1/LT629748.1	-	1	3820	3672	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216198	GCA_900105005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/005/GCA_900105005.1_IMG-taxon_2667527220_annotated_assembly	-	2SM5
Pseudomonas pohangensis	364197	PRJEB16450	349406	Proteobacteria	Gammaproteobacteria	3.76969	59.6	chromosome I:NZ_LT629785.1/LT629785.1	-	1	3501	3402	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216296	GCA_900105995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/995/GCA_900105995.1_IMG-taxon_2667527387_annotated_assembly	-	DSM 17875
Brevibacterium sandarakinum	629680	PRJEB16423	349351	Terrabacteria group	Actinobacteria	4.44106	63.3	chromosome I:NZ_LT629739.1/LT629739.1	-	1	4060	3872	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489751	GCA_900105045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/045/GCA_900105045.1_IMG-taxon_2634166182_annotated_assembly	-	DSM 22082
Agrococcus carbonis	684552	PRJEB16395	349301	Terrabacteria group	Actinobacteria	2.77331	73	chromosome I:NZ_LT629734.1/LT629734.1	-	1	2659	2572	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489719	GCA_900104705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/705/GCA_900104705.1_IMG-taxon_2634166154_annotated_assembly	-	DSM 22965
Actinoplanes derwentensis	113562	PRJEB16368	349275	Terrabacteria group	Actinobacteria	10.6542	69.4	chromosome I:NZ_LT629758.1/LT629758.1	-	1	9498	9079	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489716	GCA_900104725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/725/GCA_900104725.1_IMG-taxon_2634166338_annotated_assembly	-	DSM 43941
Desulfobacula phenolica	90732	PRJEB16485	349371	Proteobacteria	delta/epsilon subdivisions	4.87134	41.4	-	FNLL01	54	4343	4181	10/21/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487931	GCA_900105645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/645/GCA_900105645.1_IMG-taxon_2616644807_annotated_assembly	-	DSM 3384
Agromyces flavus	589382	PRJEB16409	349413	Terrabacteria group	Actinobacteria	3.69241	71.3	chromosome I:NZ_LT629755.1/LT629755.1	-	1	3500	3383	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489721	GCA_900104685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/685/GCA_900104685.1_IMG-taxon_2634166342_annotated_assembly	-	CPCC 202695
Verrucomicrobiaceae bacterium GAS474	1882831	PRJEB16461	349395	PVC group	Verrucomicrobia	3.76354	65.8	chromosome I:NZ_LT629781.1/LT629781.1	-	1	3227	3142	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05444156	GCA_900105685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/685/GCA_900105685.1_IMG-taxon_2690315640_annotated_assembly	-	GAS474
Pseudomonas granadensis	1421430	PRJEB16372	349324	Proteobacteria	Gammaproteobacteria	5.94317	60.2	chromosome I:NZ_LT629778.1/LT629778.1	-	1	5315	5132	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216579	GCA_900105485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/485/GCA_900105485.1_IMG-taxon_2667527397_annotated_assembly	-	LMG 27940
Paenibacillaceae bacterium GAS479	1882832	PRJEB16434	349341	Terrabacteria group	Firmicutes	5.51982	50.8	chromosome I:NZ_LT629764.1/LT629764.1	-	1	4914	4711	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05444162	GCA_900105225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/225/GCA_900105225.1_IMG-taxon_2693429825_annotated_assembly	-	GAS479
Jiangella sp. DSM 45060	1798224	PRJEB16432	349343	Terrabacteria group	Actinobacteria	7.48606	72.9	chromosome I:NZ_LT629771.1/LT629771.1	-	1	6772	6588	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04515669	GCA_900105175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/175/GCA_900105175.1_IMG-taxon_2634166313_annotated_assembly	-	DSM 45060
Pseudomonas asplenii	53407	PRJEB16404	349408	Proteobacteria	Gammaproteobacteria	6.52964	61.2	chromosome I:NZ_LT629777.1/LT629777.1	-	1	5784	5594	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216598	GCA_900105475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/475/GCA_900105475.1_IMG-taxon_2667527430_annotated_assembly	-	ATCC 23835
Pseudomonas xinjiangensis	487184	PRJEB16376	349320	Proteobacteria	Gammaproteobacteria	3.53709	60.7	chromosome I:NZ_LT629736.1/LT629736.1	-	1	3319	3227	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216421	GCA_900104945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/945/GCA_900104945.1_IMG-taxon_2667527388_annotated_assembly	-	NRRL B-51270
Pseudomonas salegens	1434072	PRJEB16488	349368	Proteobacteria	Gammaproteobacteria	3.7961	57.7	chromosome I:NZ_LT629787.1/LT629787.1	-	1	3502	3401	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216210	GCA_900105655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/655/GCA_900105655.1_IMG-taxon_2667527386_annotated_assembly	-	CECT 8338
Pseudomonas yamanorum	515393	PRJEB16453	349403	Proteobacteria	Gammaproteobacteria	7.08753	60.3	chromosome I:NZ_LT629793.1/LT629793.1	-	1	6543	6285	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216237	GCA_900105735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/735/GCA_900105735.1_IMG-taxon_2667528168_annotated_assembly	-	LMG 27247
Pseudomonas guangdongensis	1245526	PRJEB16458	349398	Proteobacteria	Gammaproteobacteria	3.19115	68.3	chromosome I:NZ_LT629780.1/LT629780.1	-	1	2975	2857	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216580	GCA_900105885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/885/GCA_900105885.1_IMG-taxon_2667527223_annotated_assembly	-	CCTCC 2012022
Pseudomonas sabulinigri	472181	PRJEB16439	349346	Proteobacteria	Gammaproteobacteria	4.0302	59.9	chromosome I:NZ_LT629763.1/LT629763.1	-	1	3693	3602	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216271	GCA_900105255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/255/GCA_900105255.1_IMG-taxon_2675902958_annotated_assembly	-	JCM 14963
Opitutus sp. GAS368	1882749	PRJEB16366	349277	PVC group	Verrucomicrobia	4.15088	65.7	chromosome I:NZ_LT629735.1/LT629735.1	-	1	3550	3468	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05444173	GCA_900104925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/925/GCA_900104925.1_IMG-taxon_2690315651_annotated_assembly	-	GAS368
Bradyrhizobium canariense	255045	PRJEB16424	349350	Proteobacteria	Alphaproteobacteria	7.84204	60.9	chromosome I:LT629750.1	-	1	7549	7291	10/21/16	10/21/16	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05444158	GCA_900105125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/125/GCA_900105125.1_IMG-taxon_2693430033_annotated_assembly	-	GAS369
Olsenella umbonata	604330	PRJEB16402	349410	Terrabacteria group	Actinobacteria	2.35319	64.9	chromosome I:NZ_LT629759.1/LT629759.1	-	1	2102	1988	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489857	GCA_900105025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/025/GCA_900105025.1_IMG-taxon_2636416177_annotated_assembly	-	DSM 22620
Mesorhizobium muleiense	1004279	PRJEB15963	348296	Proteobacteria	Alphaproteobacteria	6.80996	62.3	-	FNEE01	61	6659	6193	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05428953	GCA_900099905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/905/GCA_900099905.1_IMG-taxon_2675903064_annotated_assembly	-	CGMCC 1.11022
Fontibacillus panacisegetis	670482	PRJEB15824	347766	Terrabacteria group	Firmicutes	5.26464	42.8	-	FNBG01	76	4884	4630	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488542	GCA_900102215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/215/GCA_900102215.1_IMG-taxon_2634166350_annotated_assembly	-	DSM 28129
Clostridium cochlearium	1494	PRJEB16127	348584	Terrabacteria group	Firmicutes	2.40072	28.3	-	FNGL01	52	2361	2219	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216497	GCA_900103025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/025/GCA_900103025.1_IMG-taxon_2654588125_annotated_assembly	-	NLAE-zl-C224
Marmoricola scoriae	642780	PRJEB16384	349312	Terrabacteria group	Actinobacteria	4.05858	73.5	chromosome I:NZ_LT629757.1/LT629757.1	-	1	3852	3746	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04488570	GCA_900104965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/965/GCA_900104965.1_IMG-taxon_2634166904_annotated_assembly	-	DSM 22127
Friedmanniella sagamiharensis	546874	PRJEB16465	349391	Terrabacteria group	Actinobacteria	4.40529	73.4	chromosome I:NZ_LT629799.1/LT629799.1	-	1	4079	3930	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04488544	GCA_900105785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/785/GCA_900105785.1_IMG-taxon_2634166345_annotated_assembly	-	DSM 21743
Lutibacter oricola	762486	PRJEB16539	349859	FCB group	Bacteroidetes/Chlorobi group	4.12995	30.1	-	FNNJ01	58	3489	3411	10/22/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444411	GCA_900106565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/565/GCA_900106565.1_IMG-taxon_2693429896_annotated_assembly	-	DSM 24956
Lachnospiraceae bacterium NK3A20	877406	PRJEB16643	349929	Terrabacteria group	Firmicutes	2.95895	54.3	-	FNQX01	66	2566	2446	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745687	GCA_900107575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/575/GCA_900107575.1_IMG-taxon_2593339166_annotated_assembly	-	NK3A20
Salimicrobium album	50717	PRJEB16606	349922	Terrabacteria group	Firmicutes	2.62973	46.9	-	FNOS01	13	2697	2601	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488081	GCA_900107115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/115/GCA_900107115.1_IMG-taxon_2617270835_annotated_assembly	-	DSM 20748
Haloplanus vescus	555874	PRJEB16634	349937	Euryarchaeota	Halobacteria	2.77686	65.1	-	FNQT01	10	2890	2799	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488065	GCA_900107665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/665/GCA_900107665.1_IMG-taxon_2617270898_annotated_assembly	-	CGMCC 1.8712
Eubacterium barkeri	1528	PRJEB16608	349920	Terrabacteria group	Firmicutes	2.95433	48.2	-	FNOU01	45	2806	2687	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488579	GCA_900107125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/125/GCA_900107125.1_IMG-taxon_2642422543_annotated_assembly	-	VPI 5359
Thiocapsa roseopersicina	1058	PRJEB16554	349838	Proteobacteria	Gammaproteobacteria	5.38612	64.3	-	FNNZ01	81	4838	4595	10/22/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421783	GCA_900106925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/925/GCA_900106925.1_IMG-taxon_2684622843_annotated_assembly	-	DSM 217
Acetomicrobium thermoterrenum DSM 13490	1120987	PRJEB16625	349944	Synergistetes	Synergistia	1.96758	46.5	-	FNPD01	22	1959	1840	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03080603	GCA_900107215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/215/GCA_900107215.1_IMG-taxon_2599185146_annotated_assembly	-	DSM 13490
Pseudomonas costantinii	168469	PRJNA338492	338492	Proteobacteria	Gammaproteobacteria	7.24722	59.4	-	MDDR01	66	6646	6382	11/7/16	4/13/17	Contig	Ottawa Research and Development Center	SAMN05559687	GCA_001870435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/435/GCA_001870435.1_ASM187043v1	-	LMG 22119
Brevibacterium siliguriense	1136497	PRJEB16446	349330	Terrabacteria group	Actinobacteria	4.02308	64.2	chromosome I:NZ_LT629766.1/LT629766.1	-	1	3603	3377	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489752	GCA_900105315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/315/GCA_900105315.1_IMG-taxon_2634166531_annotated_assembly	-	DSM 23676
Pseudomonas vancouverensis	95300	PRJEB16464	349392	Proteobacteria	Gammaproteobacteria	6.4249	60.1	chromosome I:NZ_LT629803.1/LT629803.1	-	1	5929	5761	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216558	GCA_900105825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/825/GCA_900105825.1_IMG-taxon_2667527228_annotated_assembly	-	BS3656
Pseudomonas cedrina	651740	PRJEB16405	349407	Proteobacteria	Gammaproteobacteria	6.53902	60.8	chromosome I:NZ_LT629753.1/LT629753.1	-	1	6011	5791	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04490182	GCA_900104915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/915/GCA_900104915.1_IMG-taxon_2636416193_annotated_assembly	-	BS2981
Serratia marcescens	615	PRJNA246471	246471	Proteobacteria	Gammaproteobacteria	5.8284	58.6287	chromosome:NZ_CP011642.1/CP011642.1; plasmid pCAV1492-199:NZ_CP011641.1/CP011641.1; plasmid pCAV1492-3223:NZ_CP011637.1/CP011637.1; plasmid pCAV1492-6393:NZ_CP011638.1/CP011638.1; plasmid pCAV1492-73:NZ_CP011640.1/CP011640.1; plasmid pKPC_CAV1492:NZ_CP011639.1/CP011639.1	-	6	5649	5354	6/9/15	3/26/17	Complete Genome	University of Oxford	SAMN03733805	GCA_001022215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/215/GCA_001022215.1_ASM102221v1	-	CAV1492
Amycolatopsis pretoriensis	218821	PRJEB16622	349947	Terrabacteria group	Actinobacteria	10.299	71.2	-	FNUJ01	31	9791	9503	10/22/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421837	GCA_900107925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/925/GCA_900107925.1_IMG-taxon_2675903153_annotated_assembly	-	DSM 44654
Streptomyces melanosporofaciens	67327	PRJEB16414	349359	Terrabacteria group	Actinobacteria	10.7697	71	-	FNST01	2	9264	8313	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04490356	GCA_900105695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/695/GCA_900105695.1_IMG-taxon_2634166371_annotated_assembly	-	DSM 40318
Rhizobiales bacterium GAS188	1884351	PRJEB16367	349276	Proteobacteria	Alphaproteobacteria	9.09046	64.7	-	FNSS01	3	8286	7977	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05519104	GCA_900104855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/855/GCA_900104855.1_IMG-taxon_2693429787_annotated_assembly	-	GAS188
Halobellus clavatus	660517	PRJEB16617	349961	Euryarchaeota	Halobacteria	3.75498	64.1	-	FNPB01	30	3665	3495	10/22/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487946	GCA_900107195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/195/GCA_900107195.1_IMG-taxon_2617270777_annotated_assembly	-	CGMCC 1.10118
Arachidicoccus rhizosphaerae	551991	PRJEB16660	349904	FCB group	Bacteroidetes/Chlorobi group	4.86871	42.4	-	FNQY01	55	3867	3733	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192529	GCA_900107765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/765/GCA_900107765.1_IMG-taxon_2651870123_annotated_assembly	-	Vu-144
Rhodonellum ikkaensis	336829	PRJEB16551	349841	FCB group	Bacteroidetes/Chlorobi group	5.21456	41.9	-	FNQC01	61	4425	4325	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444412	GCA_900107465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/465/GCA_900107465.1_IMG-taxon_2693429890_annotated_assembly	-	DSM 17997
Haloactinobacterium album	648782	PRJEB16489	349367	Terrabacteria group	Actinobacteria	4.83051	68.6	-	FNTX01	2	4333	4155	10/22/16	7/28/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488554	GCA_900105765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/765/GCA_900105765.1_IMG-taxon_2634166281_annotated_assembly	-	DSM 21368
Amycolatopsis xylanica	589385	PRJEB16597	349863	Terrabacteria group	Actinobacteria	9.40609	68.9	-	FNON01	25	8540	8356	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421504	GCA_900107045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/045/GCA_900107045.1_IMG-taxon_2675903050_annotated_assembly	-	CPCC 202699
Asanoa ishikariensis	137265	PRJEB16542	349849	Terrabacteria group	Actinobacteria	9.08576	70.8	-	FNQB01	11	8420	8147	10/22/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421684	GCA_900107455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/455/GCA_900107455.1_IMG-taxon_2690315652_annotated_assembly	-	DSM 44718
Ruminococcaceae bacterium YAD3003	1520816	PRJEB16616	349962	Terrabacteria group	Firmicutes	2.674	43.6	-	FNPA01	30	2414	2316	10/22/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02910264	GCA_900107185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/185/GCA_900107185.1_IMG-taxon_2593339208_annotated_assembly	-	YAD3003
Hydrobacter penzbergensis	1235997	PRJEB16590	349870	FCB group	Bacteroidetes/Chlorobi group	3.96151	45.2	-	FNNO01	40	3489	3409	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444410	GCA_900106985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/985/GCA_900106985.1_IMG-taxon_2693429880_annotated_assembly	-	DSM 25353
Nitrosomonas oligotropha	42354	PRJEB16552	349840	Proteobacteria	Betaproteobacteria	3.32311	48.4	-	FNOE01	80	3140	2946	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216300	GCA_900106555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/555/GCA_900106555.1_IMG-taxon_2671180131_annotated_assembly	-	Nm75
Pseudomonas kuykendallii	1007099	PRJEB16580	349880	Proteobacteria	Gammaproteobacteria	4.69037	65.9	-	FNNU01	15	4351	4258	10/22/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216287	GCA_900106975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/975/GCA_900106975.1_IMG-taxon_2671180037_annotated_assembly	-	NRRL B-59562
Paraburkholderia sartisoli	83784	PRJEB16664	349900	Proteobacteria	Betaproteobacteria	5.93053	63.5	-	FNRQ01	22	5368	5209	10/22/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192564	GCA_900107685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/685/GCA_900107685.1_IMG-taxon_2651870102_annotated_assembly	-	LMG 24000
Desulfuromusa kysingii	37625	PRJEB16640	349932	Proteobacteria	delta/epsilon subdivisions	3.74489	46.7	-	FNQN01	27	3407	3300	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660420	GCA_900107645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/645/GCA_900107645.1_IMG-taxon_2599185196_annotated_assembly	-	DSM 7343
Chitinophaga terrae Kim and Jung 2007	408074	PRJEB16637	349943	FCB group	Bacteroidetes/Chlorobi group	6.63086	45.8	-	FNRL01	64	5605	5427	10/22/16	7/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660909	GCA_900107795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/795/GCA_900107795.1_IMG-taxon_2599185217_annotated_assembly	-	DSM 23920
Thalassobacillus cyri	571932	PRJEB16661	349903	Terrabacteria group	Firmicutes	4.30083	42.5	-	FNQR01	37	4307	4145	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421743	GCA_900107755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/755/GCA_900107755.1_IMG-taxon_2675903014_annotated_assembly	-	CCM7597
Pseudomonas saponiphila	556534	PRJEB16433	349342	Proteobacteria	Gammaproteobacteria	7.37585	62.8	-	FNTJ01	4	7029	6707	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216178	GCA_900105185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/185/GCA_900105185.1_IMG-taxon_2667528183_annotated_assembly	-	DSM 9751
Pseudomonas coleopterorum	1605838	PRJEB16491	349425	Proteobacteria	Gammaproteobacteria	4.92289	62	-	FNTZ01	2	4432	4288	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216510	GCA_900105555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/555/GCA_900105555.1_IMG-taxon_2675903003_annotated_assembly	-	LMG 28558
Pseudomonas mohnii	395600	PRJEB16418	349365	Proteobacteria	Gammaproteobacteria	6.59259	59.6	-	FNRV01	2	6119	5890	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216205	GCA_900105115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/115/GCA_900105115.1_IMG-taxon_2667527224_annotated_assembly	-	DSM 18327
Jannaschia faecimaris	1244108	PRJEB16618	349960	Proteobacteria	Alphaproteobacteria	3.81076	62	-	FNPX01	48	3785	3623	10/22/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444004	GCA_900107415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/415/GCA_900107415.1_IMG-taxon_2693429889_annotated_assembly	-	DSM 100420
Albimonas donghaensis	356660	PRJEB16563	349829	Proteobacteria	Alphaproteobacteria	5.01439	71.6	-	FNMZ01	30	4258	4157	10/22/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444336	GCA_900106695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/695/GCA_900106695.1_IMG-taxon_2693429856_annotated_assembly	-	DSM 17890
Paraburkholderia caballeronis	416943	PRJEB16390	349306	Proteobacteria	Betaproteobacteria	7.11514	67	-	FNSR01	3	6256	6038	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05445871	GCA_900104845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/845/GCA_900104845.1_IMG-taxon_2693429824_annotated_assembly	-	TNe-841
Actinomyces nasicola	208480	PRJEB16663	349901	Terrabacteria group	Actinobacteria	2.53224	64.9	-	FNQV01	29	2397	2254	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02910418	GCA_900107735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/735/GCA_900107735.1_IMG-taxon_2593339153_annotated_assembly	-	KPR-1
Pseudomonas jessenii	77298	PRJNA390484	390484	Proteobacteria	Gammaproteobacteria	6.53721	59.7	-	NIWT01	13	6019	5825	7/28/17	8/1/17	Contig	Institute of Biochemistry and Biophysics Polish Academy of Sciences	SAMN07236640	GCA_002236115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/236/115/GCA_002236115.1_ASM223611v1	-	DSM 17150
Bacillus caseinilyticus	1503961	PRJEB16536	349854	Terrabacteria group	Firmicutes	5.87263	44.9	-	FNPI01	61	5320	5108	10/22/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421736	GCA_900107275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/275/GCA_900107275.1_IMG-taxon_2675903024_annotated_assembly	-	SP
Roseicitreum antarcticum	564137	PRJEB16595	349865	Proteobacteria	Alphaproteobacteria	4.25002	63.1	-	FNOM01	77	4064	3809	10/22/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488238	GCA_900107025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/025/GCA_900107025.1_IMG-taxon_2617270912_annotated_assembly	-	CGMCC 1.8894
Marinobacter mobilis	488533	PRJEB16583	349877	Proteobacteria	Gammaproteobacteria	3.97161	58.4	-	FNNE01	26	3631	3528	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487960	GCA_900106945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/945/GCA_900106945.1_IMG-taxon_2617270765_annotated_assembly	-	CGMCC 1.7059
Corynebacterium jeikeium	38289	PRJNA231221	231221	Terrabacteria group	Actinobacteria	2.65079	58.6	chromosome:NZ_CP022054.1/CP022054.1	-	1	2361	2235	6/27/17	6/29/17	Complete Genome	US Food and Drug Administration 	SAMN06173341	GCA_002209185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/185/GCA_002209185.1_ASM220918v1	-	FDAARGOS_328
Pseudomonas palleroniana	191390	PRJEB16492	349424	Proteobacteria	Gammaproteobacteria	6.15313	60.5	-	FNUA01	2	5558	5377	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04490198	GCA_900105975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/975/GCA_900105975.1_IMG-taxon_2639762588_annotated_assembly	-	BS3265
Lachnospiraceae bacterium KHCPX20	1855375	PRJEB16579	349881	Terrabacteria group	Firmicutes	3.20618	43.9	-	FNOC01	64	2964	2790	10/22/16	7/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216391	GCA_900106615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/615/GCA_900106615.1_IMG-taxon_2651870364_annotated_assembly	-	KHCPX20
Porphyromonadaceae bacterium KH3R12	1855397	PRJEB16655	349908	FCB group	Bacteroidetes/Chlorobi group	4.15452	43.6	-	FNQW01	94	3319	3129	10/22/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216331	GCA_900107785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/785/GCA_900107785.1_IMG-taxon_2654588140_annotated_assembly	-	KH3R12
Flavobacterium gillisiae	150146	PRJEB16645	349927	FCB group	Bacteroidetes/Chlorobi group	4.37796	34.3	-	FNRD01	33	3813	3685	10/22/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443667	GCA_900107635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/635/GCA_900107635.1_IMG-taxon_2693429912_annotated_assembly	-	DSM 22376
Marinococcus luteus	1122204	PRJEB16571	349889	Terrabacteria group	Firmicutes	2.90857	48.2	-	FNNC01	15	2951	2869	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421781	GCA_900106595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/595/GCA_900106595.1_IMG-taxon_2684622904_annotated_assembly	-	DSM 23126
Pseudomonas panacis	307251	PRJEB16379	349317	Proteobacteria	Gammaproteobacteria	6.96502	60.8	-	FNSP01	7	6355	6079	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04490199	GCA_900104875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/875/GCA_900104875.1_IMG-taxon_2642422516_annotated_assembly	-	BS2778
Microbacterium humi	640635	PRJEB16417	349366	Terrabacteria group	Actinobacteria	3.35622	67.3	-	FNRY01	2	3324	3196	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04489806	GCA_900105715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/715/GCA_900105715.1_IMG-taxon_2630968996_annotated_assembly	-	DSM 21799
Bradyrhizobium erythrophlei	1437360	PRJEB16459	349397	Proteobacteria	Alphaproteobacteria	8.96717	63.8	-	FNTH01	2	8417	8054	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444164	GCA_900105845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/845/GCA_900105845.1_IMG-taxon_2690316366_annotated_assembly	-	MT12
Amycolatopsis tolypomycina	208445	PRJEB16463	349393	Terrabacteria group	Actinobacteria	10.3634	71.7	-	FNSO01	4	9504	9143	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04489727	GCA_900105945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/945/GCA_900105945.1_IMG-taxon_2634166899_annotated_assembly	-	DSM 44544
Nocardioides exalbidus	402596	PRJEB16472	349384	Terrabacteria group	Actinobacteria	4.59985	71.8	-	FNRT01	2	4384	4257	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04489844	GCA_900105585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/585/GCA_900105585.1_IMG-taxon_2639762616_annotated_assembly	-	DSM 22017
Collimonas sp. OK607	1798194	PRJEB17090	351710	Proteobacteria	Betaproteobacteria	5.37454	56	-	FOKF01	90	5092	4856	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04515620	GCA_900111995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/995/GCA_900111995.1_IMG-taxon_2609459737_annotated_assembly	-	OK607
Litoreibacter albidus	670155	PRJEB16594	349866	Proteobacteria	Alphaproteobacteria	3.58073	59.2	-	FNOI01	12	3543	3443	10/22/16	7/28/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488001	GCA_900107015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/015/GCA_900107015.1_IMG-taxon_2617270827_annotated_assembly	-	DSM 26922
Proteiniborus ethanoligenes	415015	PRJEB16619	349959	Terrabacteria group	Firmicutes	3.1615	32.6	-	FNQE01	69	2949	2846	10/22/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660462	GCA_900107485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/485/GCA_900107485.1_IMG-taxon_2599185206_annotated_assembly	-	DSM 21650
Nitratireductor basaltis	472175	PRJNA360029	360029	Proteobacteria	Alphaproteobacteria	3.35758	58.6	chromosome:NZ_CP019044.1/CP019044.1	-	1	3237	3082	1/17/17	4/16/17	Complete Genome	Pukyong National University	SAMN06199440	GCA_001953055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/055/GCA_001953055.1_ASM195305v1	-	RR3-28
Herbiconiux ginsengi	381665	PRJEB16623	349946	Terrabacteria group	Actinobacteria	4.85372	68.4	-	FNPZ01	12	4549	4408	10/22/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216554	GCA_900107435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/435/GCA_900107435.1_IMG-taxon_2667527392_annotated_assembly	-	CGMCC 4.3491
Rhizobiales bacterium GAS191	1882830	PRJEB16455	349401	Proteobacteria	Alphaproteobacteria	10.0137	64.4	-	FNSX01	3	9228	8834	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444161	GCA_900105365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/365/GCA_900105365.1_IMG-taxon_2690315650_annotated_assembly	-	GAS191
Psychroflexus halocasei	908615	PRJEB16633	349938	FCB group	Bacteroidetes/Chlorobi group	2.67192	33.4	-	FNQF01	43	2479	2408	10/22/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421540	GCA_900107595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/595/GCA_900107595.1_IMG-taxon_2675903162_annotated_assembly	-	DSM 23581
Marininema mesophilum	1048340	PRJEB16541	349850	Terrabacteria group	Firmicutes	3.33183	44.8	-	FNNQ01	42	3168	3009	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444487	GCA_900106775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/775/GCA_900106775.1_IMG-taxon_2693429881_annotated_assembly	-	DSM 45610
Rubrimonas cliftonensis	89524	PRJEB16639	349941	Proteobacteria	Alphaproteobacteria	4.86407	71.6	-	FNQM01	98	4546	4374	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444370	GCA_900107585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/585/GCA_900107585.1_IMG-taxon_2693429904_annotated_assembly	-	DSM 15345
Bizionia paragorgiae	283786	PRJEB16638	349942	FCB group	Bacteroidetes/Chlorobi group	3.14363	35.3	-	FNQK01	41	2887	2790	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487990	GCA_900107625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/625/GCA_900107625.1_IMG-taxon_2622736593_annotated_assembly	-	DSM 23842
Pedobacter hartonius	425514	PRJEB16632	349939	FCB group	Bacteroidetes/Chlorobi group	5.18872	43	-	FNRA01	42	4569	4423	10/22/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05443550	GCA_900107535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/535/GCA_900107535.1_IMG-taxon_2693429882_annotated_assembly	-	DSM 19033
Thiothrix caldifontis	525918	PRJEB16659	349914	Proteobacteria	Gammaproteobacteria	3.9369	50.6	-	FNQP01	64	3781	3640	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660964	GCA_900107695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/695/GCA_900107695.1_IMG-taxon_2599185268_annotated_assembly	-	DSM 21228
Acinetobacter kyonggiensis	595670	PRJEB16543	349848	Proteobacteria	Gammaproteobacteria	3.71402	38.9	-	FNPK01	73	3588	3337	10/22/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421643	GCA_900107285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/285/GCA_900107285.1_IMG-taxon_2675903034_annotated_assembly	-	ANC 5109
Allochromatium warmingii	61595	PRJEB16610	349958	Proteobacteria	Gammaproteobacteria	2.95851	55.3	-	FNOW01	94	2716	2550	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421644	GCA_900107145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/145/GCA_900107145.1_IMG-taxon_2675903030_annotated_assembly	-	DSM 173
Micromonospora pattaloongensis	405436	PRJEB16628	349951	Terrabacteria group	Actinobacteria	5.35387	72.4	-	FNPH01	28	4902	4713	10/22/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444365	GCA_900107255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/255/GCA_900107255.1_IMG-taxon_2693429860_annotated_assembly	-	DSM 45245
Alkalimonas amylolytica	152573	PRJEB16662	349902	Proteobacteria	Gammaproteobacteria	4.06006	51.5	-	FNRM01	30	3705	3592	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488051	GCA_900107845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/845/GCA_900107845.1_IMG-taxon_2617270770_annotated_assembly	-	CGMCC 1.3430
Flavobacterium degerlachei	229203	PRJEB16540	349851	FCB group	Bacteroidetes/Chlorobi group	3.85641	34	-	FNMV01	43	3351	3252	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444338	GCA_900106645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/645/GCA_900106645.1_IMG-taxon_2693429883_annotated_assembly	-	DSM 15718
Microbulbifer marinus	658218	PRJEB16641	349931	Proteobacteria	Gammaproteobacteria	3.98239	59.8	-	FNQO01	11	3406	3323	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216562	GCA_900107725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/725/GCA_900107725.1_IMG-taxon_2667527380_annotated_assembly	-	CGMCC 1.10657
Lentibacter algarum	576131	PRJEB16567	349825	Proteobacteria	Alphaproteobacteria	3.29349	55.7	-	FNPR01	21	3259	3168	10/22/16	7/28/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444486	GCA_900107355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/355/GCA_900107355.1_IMG-taxon_2693429861_annotated_assembly	-	DSM 24677
Aeromonas veronii	654	PRJNA319612	319612	Proteobacteria	Gammaproteobacteria	4.5841	58.6	chromosome:CP015448.1	-	1	4152	3623	4/29/16	4/29/16	Complete Genome	Wuhan Polytechnic University	SAMN04901561	GCA_001634345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/345/GCA_001634345.1_ASM163434v1	-	CB51
Acidovorax soli	592050	PRJEB16652	349911	Proteobacteria	Betaproteobacteria	4.13022	64.6	-	FNQJ01	90	3883	3730	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421875	GCA_900107605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/605/GCA_900107605.1_IMG-taxon_2675903230_annotated_assembly	-	DSM 25157
Tepidimicrobium xylanilyticum	1123352	PRJEB16581	349879	Terrabacteria group	Firmicutes	3.00252	33.3	-	FNNG01	38	3038	2887	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660923	GCA_900106765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/765/GCA_900106765.1_IMG-taxon_2599185171_annotated_assembly	-	DSM 23310
Aidingimonas halophila	574349	PRJEB16538	349860	Proteobacteria	Gammaproteobacteria	3.88648	58.2	-	FNNI01	21	3649	3537	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05443545	GCA_900106955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/955/GCA_900106955.1_IMG-taxon_2693429859_annotated_assembly	-	DSM 19219
Citreimonas salinaria	321339	PRJEB16627	349952	Proteobacteria	Alphaproteobacteria	4.25999	67.1	-	FNPF01	62	4099	3932	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444340	GCA_900107235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/235/GCA_900107235.1_IMG-taxon_2693429906_annotated_assembly	-	DSM 26880
Aequorivita viscosa	797419	PRJEB16593	349867	FCB group	Bacteroidetes/Chlorobi group	3.53553	36.6	-	FNNS01	62	3101	2947	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216556	GCA_900106795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/795/GCA_900106795.1_IMG-taxon_2667527447_annotated_assembly	-	CGMCC 1.11023
Geodermatophilus africanus	1137993	PRJEB16605	349923	Terrabacteria group	Actinobacteria	5.47121	74.3	-	FNOT01	52	5186	4852	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660209	GCA_900107105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/105/GCA_900107105.1_IMG-taxon_2599185203_annotated_assembly	-	DSM 45422
Hymenobacter psychrophilus	651662	PRJEB16609	349919	FCB group	Bacteroidetes/Chlorobi group	4.75821	60.8	-	FNOV01	45	4197	4047	10/22/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488069	GCA_900107135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/135/GCA_900107135.1_IMG-taxon_2617270879_annotated_assembly	-	CGMCC 1.8975
Saccharopolyspora shandongensis	418495	PRJEB16589	349871	Terrabacteria group	Actinobacteria	10.1514	69.8	-	FNOK01	135	9186	8633	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216215	GCA_900106995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/995/GCA_900106995.1_IMG-taxon_2671180068_annotated_assembly	-	CGMCC 4.3530
Sporanaerobacter sp. PP17-6a	1891289	PRJEB15171	350439	Terrabacteria group	Firmicutes	3.29604	33.5	-	FMIF01	53	3165	3054	10/24/16	4/13/17	Contig	CEBITEC	SAMEA4392617	GCA_900095615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/615/GCA_900095615.1_PP176A	-	-
Rheinheimera pacifica	173990	PRJEB16119	348592	Proteobacteria	Gammaproteobacteria	4.45786	49.2	-	FNXF01	46	4177	4037	10/27/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660691	GCA_900108485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/485/GCA_900108485.1_IMG-taxon_2599185208_annotated_assembly	-	DSM 17616
Natronorubrum sediminis	640943	PRJEB16711	350411	Euryarchaeota	Halobacteria	3.78254	61.1	-	FNWL01	6	3645	3508	10/27/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487967	GCA_900108095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/095/GCA_900108095.1_IMG-taxon_2617270925_annotated_assembly	-	CGMCC 1.8981
Paraburkholderia hospita	169430	PRJEB15779	347731	Proteobacteria	Betaproteobacteria	11.2005	61.9	-	FNXA01	188	10442	9861	10/27/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192544	GCA_900108355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/355/GCA_900108355.1_IMG-taxon_2654588150_annotated_assembly	-	LMG 20598
Chryseobacterium hominis	420404	PRJEB15770	347730	FCB group	Bacteroidetes/Chlorobi group	2.78864	35.8	-	FNWX01	91	2636	2504	10/27/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421793	GCA_900108525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/525/GCA_900108525.1_IMG-taxon_2684622847_annotated_assembly	-	DSM 19326
Halopenitus malekzadehii	1267564	PRJEB15788	347713	Euryarchaeota	Halobacteria	3.13682	64.5	-	FNWU01	41	3120	2930	10/27/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192561	GCA_900108505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/505/GCA_900108505.1_IMG-taxon_2651870118_annotated_assembly	-	IBRC-M10418
Varibaculum sp. Marseille-P2802	1852372	PRJEB16532	349856	Terrabacteria group	Actinobacteria	2.28336	53	-	FNWI01	4	2019	1930	10/27/16	4/13/17	Contig	URMITE	SAMEA4521270	GCA_900106855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/855/GCA_900106855.1_PRJEB16532	-	Marseille-P2802
Chryseobacterium culicis	680127	PRJEB15699	347438	FCB group	Bacteroidetes/Chlorobi group	4.9045	37.3	-	FNWQ01	19	4434	4314	10/27/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421593	GCA_900108365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/365/GCA_900108365.1_IMG-taxon_2687453786_annotated_assembly	-	DSM 23031
Flavobacterium marinum	1159016	PRJEB16112	348599	FCB group	Bacteroidetes/Chlorobi group	2.97769	35.4	-	FNXE01	96	2901	2766	10/27/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02927937	GCA_900108395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/395/GCA_900108395.1_IMG-taxon_2596583585_annotated_assembly	-	CGMCC 1.10825
Tyzzerella sp. An114	1965545	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.75169	31.2	-	NFLT01	78	2654	2498	5/30/17	6/16/17	Contig	Veterinary Research Institute	SAMN06473586	GCA_002161055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/055/GCA_002161055.1_ASM216105v1	-	An114
Vampirovibrio chlorellavorus	758823	PRJNA278896	278896	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.03023	51.4294	plasmid unnamed 1:CM007359.1; plasmid unnamed 2:CM007360.1	LAPX01	28	-	-	11/1/16	11/1/16	Contig	University of Queensland	SAMN03434871	GCA_001858525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/525/GCA_001858525.1_ASM185852v1	-	-
Natrialba sp. SSL1	1869245	PRJNA327293	327293	Euryarchaeota	Halobacteria	4.58084	61.5	-	MASN01	61	4337	4149	11/2/16	4/17/17	Contig	M. G. Science Institute	SAMN05328039	GCA_001861355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/355/GCA_001861355.1_ASM186135v1	-	SSL1
Anaerobacillus arseniciselenatis	85682	PRJNA348836	348836	Terrabacteria group	Firmicutes	3.953	36.1	-	MLQQ01	58	3786	3626	11/3/16	4/17/17	Contig	University of Manchester	SAMN05916107	GCA_001865995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/995/GCA_001865995.1_ASM186599v1	-	DSM 15340
Anaerobacillus alkalilacustris	393763	PRJNA348894	348894	Terrabacteria group	Firmicutes	4.04743	35	-	MLQR01	50	3841	3536	11/3/16	4/17/17	Contig	University of Manchester	SAMN05916140	GCA_001866005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/005/GCA_001866005.1_ASM186600v1	-	DSM 18345
Anaerobacillus alkalidiazotrophicus	472963	PRJNA349001	349001	Terrabacteria group	Firmicutes	4.60936	34.8	-	MLQS01	36	4336	4071	11/3/16	4/17/17	Contig	University of Manchester	SAMN05916141	GCA_001866055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/055/GCA_001866055.1_ASM186605v1	-	DSM 22531
Anaerobacillus sp. NB2006	1532552	PRJNA308645	308645	Terrabacteria group	Firmicutes	4.94642	35.8	-	LQXD01	211	4991	4691	11/3/16	4/13/17	Scaffold	University of Manchester	SAMN04407006	GCA_001866075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/075/GCA_001866075.1_ASM186607v1	-	NB2006
Polynucleobacter wuianus	1743168	PRJNA295639	295639	Proteobacteria	Betaproteobacteria	2.2322	44.9	chromosome:NZ_CP015922.1/CP015922.1	-	1	2310	2241	6/8/16	4/12/17	Chromosome	University of Innsbruck	SAMN05017694	GCA_001659725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/725/GCA_001659725.1_ASM165972v1	-	QLW-P1FAT50C-4
Rice orange leaf phytoplasma	146897	PRJNA341900	341900	Terrabacteria group	Tenericutes	0.599264	28.2	-	MIEP01	8	603	536	11/4/16	4/17/17	Contig	SCAU	SAMN05730130	GCA_001866375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/375/GCA_001866375.1_ASM186637v1	-	LD1
Erwinia teleogrylli	1384589	PRJNA299064	299064	Proteobacteria	Gammaproteobacteria	5.454	55.3	-	LLXO01	115	5226	4981	1/4/16	4/11/17	Scaffold	Sichuan University	SAMN04202767	GCA_001484765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/765/GCA_001484765.1_ASM148476v1	26800121	SCU-B244
Bacillus oryziterrae	1191699	PRJNA178617	178617	Terrabacteria group	Firmicutes	3.5758	36.1	-	ANOK01	18	3414	3309	1/11/13	4/17/17	Scaffold	"State Key Lab of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, P. R. China"	SAMN02471015	GCA_000331575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/575/GCA_000331575.1_ASM33157v1	-	ZYK
Pseudomonas fragi	296	PRJNA307076	307076	Proteobacteria	Gammaproteobacteria	5.10181	58.6	chromosome:NZ_CP013861.1/CP013861.1	-	1	4637	4347	2/1/16	4/11/17	Complete Genome	Nanjing Normal university	SAMN04371283	GCA_001543265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/265/GCA_001543265.1_ASM154326v1	-	P121
Fervidobacterium thailandensis	1008305	PRJNA317050	317050	Thermotogae	Thermotogae	2.04021	45.8	-	LWAF01	55	1940	1859	9/2/16	4/17/17	Contig	IRNAS-CSIC	SAMN04599355	GCA_001719065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/065/GCA_001719065.1_ASM171906v1	-	FC2004
Lawsonella clevelandensis	1528099	PRJNA256353	256353	Terrabacteria group	Actinobacteria	1.86055	58.6	chromosome:NZ_CP009312.1/CP009312.1	-	1	1614	1537	9/17/15	9/21/17	Complete Genome	CDC	SAMN02943398	GCA_001293125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/125/GCA_001293125.1_ASM129312v1	26659691	X1036
Ruminococcaceae bacterium Marseille-P2935	1852383	PRJEB16354	349288	Terrabacteria group	Firmicutes	2.67428	45.2	-	FNWA01	7	2586	2489	10/27/16	4/13/17	Scaffold	URMITE	SAMEA4519288	GCA_900104565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/565/GCA_900104565.1_PRJEB16354	-	Marseille-P2935
Propionispora vibrioides	112903	PRJEB16960	351070	Terrabacteria group	Firmicutes	4.4336	47.8	-	FODY01	58	4163	3992	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04490178	GCA_900110485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/485/GCA_900110485.1_IMG-taxon_2634166332_annotated_assembly	-	DSM 13305
Chitinophaga arvensicola	29529	PRJEB16961	351069	FCB group	Bacteroidetes/Chlorobi group	8.31637	46.6	-	FOJG01	3	6731	6610	10/29/16	7/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488122	GCA_900110835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/835/GCA_900110835.1_IMG-taxon_2636416040_annotated_assembly	-	DSM 3695
Paenisporosarcina quisquiliarum	365346	PRJEB16880	351004	Terrabacteria group	Firmicutes	4.03349	36	-	FOBQ01	20	3996	3860	10/29/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487786	GCA_900109875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/875/GCA_900109875.1_IMG-taxon_2623620615_annotated_assembly	-	SK 55
Thorsellia anophelis DSM 18579	1123402	PRJEB17045	351185	Proteobacteria	Gammaproteobacteria	3.55098	35.5	-	FOHV01	67	2972	2786	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02583745	GCA_900111395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/395/GCA_900111395.1_IMG-taxon_2599185261_annotated_assembly	-	DSM 18579
Cryobacterium luteum	1424661	PRJEB16910	351045	Terrabacteria group	Actinobacteria	3.83407	65.1	-	FOCN01	73	3650	3452	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216281	GCA_900110125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/125/GCA_900110125.1_IMG-taxon_2667527407_annotated_assembly	-	CGMCC 1.11210
Aliicoccus persicus	930138	PRJEB16995	351109	Terrabacteria group	Firmicutes	2.06141	38.5	-	FOIT01	8	2067	1976	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192557	GCA_900110815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/815/GCA_900110815.1_IMG-taxon_2654588195_annotated_assembly	-	IBRC-M10081
Paraburkholderia diazotrophica	667676	PRJEB16816	350991	Proteobacteria	Betaproteobacteria	8.68858	62.6	-	FNYE01	112	8008	7527	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192539	GCA_900108945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/945/GCA_900108945.1_IMG-taxon_2654588103_annotated_assembly	-	LMG 26031
Isobaculum melis	142588	PRJEB17005	351164	Terrabacteria group	Firmicutes	2.82113	35.2	-	FOHA01	44	2757	2641	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488559	GCA_900111355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/355/GCA_900111355.1_IMG-taxon_2634166323_annotated_assembly	-	DSM 13760
Phycicoccus cremeus	587636	PRJEB16973	351129	Terrabacteria group	Actinobacteria	4.33093	71.7	-	FOHB01	18	4073	3942	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216199	GCA_900111375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/375/GCA_900111375.1_IMG-taxon_2671180066_annotated_assembly	-	CGMCC 1.6963
Gracilibacillus ureilyticus	531814	PRJEB17022	351208	Terrabacteria group	Firmicutes	4.07159	37.6	-	FOGL01	38	4025	3881	10/29/16	7/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487944	GCA_900111195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/195/GCA_900111195.1_IMG-taxon_2617270788_annotated_assembly	-	CGMCC 1.7727
Salipaludibacillus aurantiacus	1601833	PRJEB16964	351066	Terrabacteria group	Firmicutes	4.43518	42.4	-	FOGT01	41	4245	4135	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05518684	GCA_900111295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/295/GCA_900111295.1_IMG-taxon_2675903018_annotated_assembly	-	S9
Pseudomonas cuatrocienegasensis	543360	PRJEB16969	351071	Proteobacteria	Gammaproteobacteria	5.35874	61.9	-	FOFP01	50	4874	4680	10/29/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216600	GCA_900110925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/925/GCA_900110925.1_IMG-taxon_2663763600_annotated_assembly	-	CIP 109853
Thalassotalea agarivorans	349064	PRJEB17046	351184	Proteobacteria	Gammaproteobacteria	3.30653	41.8	-	FOHK01	26	3048	2940	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660429	GCA_900111755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/755/GCA_900111755.1_IMG-taxon_2599185215_annotated_assembly	-	DSM 19706
Nonomuraea wenchangensis	568860	PRJEB17052	351177	Terrabacteria group	Actinobacteria	10.0512	71.7	-	FOHX01	40	9597	9232	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421811	GCA_900111685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/685/GCA_900111685.1_IMG-taxon_2675903060_annotated_assembly	-	CGMCC 4.5598
Lechevalieria xinjiangensis	402600	PRJEB16944	351084	Terrabacteria group	Actinobacteria	8.68411	70.7	-	FOFR01	54	8148	7802	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216188	GCA_900110955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/955/GCA_900110955.1_IMG-taxon_2667527444_annotated_assembly	-	CGMCC 4.3525
Nonomuraea pusilla	46177	PRJEB16832	350967	Terrabacteria group	Actinobacteria	9.20433	72.4	-	FOBF01	66	8538	8171	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660976	GCA_900109355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/355/GCA_900109355.1_IMG-taxon_2599185218_annotated_assembly	-	DSM 43357
Ectothiorhodospira marina	1396821	PRJEB16815	350992	Proteobacteria	Gammaproteobacteria	3.18585	62.3	-	FOAA01	41	3003	2875	10/29/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444515	GCA_900109495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/495/GCA_900109495.1_IMG-taxon_2675903016_annotated_assembly	-	DSM 241
Geodermatophilus poikilotrophus	1333667	PRJEB17048	351182	Terrabacteria group	Actinobacteria	4.82816	74.6	-	FOIE01	18	4549	4381	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488546	GCA_900111455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/455/GCA_900111455.1_IMG-taxon_2636416082_annotated_assembly	-	DSM 44209
Halobacterium jilantaiense	355548	PRJEB16890	350955	Euryarchaeota	Halobacteria	2.95279	67.9	-	FOJA01	2	3036	2940	10/29/16	7/28/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487945	GCA_900110535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/535/GCA_900110535.1_IMG-taxon_2617270915_annotated_assembly	-	CGMCC 1.5337
Salinihabitans flavidus	569882	PRJEB16945	351093	Proteobacteria	Alphaproteobacteria	4.0886	63.2	-	FODS01	86	3986	3770	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04490248	GCA_900110425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/425/GCA_900110425.1_IMG-taxon_2634166353_annotated_assembly	-	DSM 27842
Parapedobacter koreensis	332977	PRJEB16825	350983	FCB group	Bacteroidetes/Chlorobi group	5.54776	48.2	-	FNZR01	27	4751	4656	10/29/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421740	GCA_900109365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/365/GCA_900109365.1_IMG-taxon_2671180226_annotated_assembly	-	Jip14
Stigmatella erecta	83460	PRJEB17053	351176	Proteobacteria	delta/epsilon subdivisions	9.21722	69.4	-	FOIJ01	47	7429	7139	10/29/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443639	GCA_900111745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/745/GCA_900111745.1_IMG-taxon_2693429888_annotated_assembly	-	DSM 16858
Azotobacter beijerinckii	170623	PRJEB16790	350914	Proteobacteria	Gammaproteobacteria	5.0723	65.7	-	FNYQ01	249	4962	4394	10/29/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04244572	GCA_900108885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/885/GCA_900108885.1_IMG-taxon_2597490354_annotated_assembly	-	DSM 373
Beijerinckia sp. 28-YEA-48	1882748	PRJEB16420	349354	Proteobacteria	Alphaproteobacteria	6.42763	61.1	-	FNSI01	2	6034	5935	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443249	GCA_900104955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/955/GCA_900104955.1_IMG-taxon_2693429820_annotated_assembly	-	28-YEA-48
Defluviimonas indica	765699	PRJEB16564	349828	Proteobacteria	Alphaproteobacteria	4.28069	66.3	-	FNOB01	77	4120	3916	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444006	GCA_900106675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/675/GCA_900106675.1_IMG-taxon_2693429897_annotated_assembly	-	DSM 24802
Nitrosomonas halophila	44576	PRJEB16612	349956	Proteobacteria	Betaproteobacteria	3.21166	52.8	-	FNOY01	156	2947	2752	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421881	GCA_900107165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/165/GCA_900107165.1_IMG-taxon_2675903041_annotated_assembly	-	Nm1
Prevotellamassilia timonensis	1852370	PRJEB16531	349857	FCB group	Bacteroidetes/Chlorobi group	3.47535	48.9	-	FNMR01	17	2759	2638	10/22/16	4/13/17	Scaffold	URMITE	SAMEA4521261	GCA_900106785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/785/GCA_900106785.1_PRJEB16531	-	Marseille-P2831
Eubacterium aggregans	81409	PRJEB16668	349896	Terrabacteria group	Firmicutes	2.83347	48.6	-	FNRK01	66	2781	2640	10/22/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04515656	GCA_900107815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/815/GCA_900107815.1_IMG-taxon_2642422588_annotated_assembly	-	SR12
Pseudomonas proteolytica	219574	PRJEB16476	349380	Proteobacteria	Gammaproteobacteria	6.49601	60.3	-	FNTR01	7	5995	5719	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04490200	GCA_900105955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/955/GCA_900105955.1_IMG-taxon_2639763197_annotated_assembly	-	BS2985
Pseudomonas anguilliseptica	53406	PRJEB16454	349402	Proteobacteria	Gammaproteobacteria	5.22962	60.2	-	FNSC01	3	5088	4611	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421553	GCA_900105355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/355/GCA_900105355.1_IMG-taxon_2687453785_annotated_assembly	-	DSM 12111
Tindallia californiensis	159292	PRJEB16615	349963	Terrabacteria group	Firmicutes	3.12207	39.8	-	FNPV01	27	2879	2789	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192546	GCA_900107405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/405/GCA_900107405.1_IMG-taxon_2651870111_annotated_assembly	-	APO
Trichococcus collinsii	157076	PRJEB12704	317994	Terrabacteria group	Firmicutes	3.28869	45.8	-	FJNA01	6	3150	3025	4/11/16	5/31/17	Scaffold	WAGENINGEN UNIVERSITY	SAMEA3869527	GCA_900067155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/067/155/GCA_900067155.1_ASM90006715v1	-	-
Paracoccus alkenifer	65735	PRJEB16121	348590	Proteobacteria	Alphaproteobacteria	3.1919	67.3	-	FNXG01	19	3063	2945	10/27/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488075	GCA_900108405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/405/GCA_900108405.1_IMG-taxon_2617270733_annotated_assembly	-	DSM 11593
Thermoleophilum album	29539	PRJEB16694	350465	Terrabacteria group	Actinobacteria	2.20719	69.1	-	FNWJ01	5	2122	2047	10/27/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745716	GCA_900108055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/055/GCA_900108055.1_IMG-taxon_2597490378_annotated_assembly	-	ATCC 35263
Planococcus salinarum	622695	PRJNA329462	329462	Terrabacteria group	Firmicutes	1.07396	48	-	MBQG01	145	1102	746	10/28/16	4/17/17	Contig	University of Malaya	SAMN05413079	GCA_001856085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/085/GCA_001856085.1_ASM185608v1	-	DSM 23820
Lawsonella clevelandensis	1528099	PRJNA256353	256353	Terrabacteria group	Actinobacteria	1.91515	58.6	chromosome:NZ_CP012390.1/CP012390.1	-	1	1670	1588	9/14/15	4/11/17	Complete Genome	CDC	SAMN03943545	GCA_001281505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/505/GCA_001281505.1_ASM128150v1	26659691	X1698
Corynebacterium sp. ATCC 6931	1487956	PRJNA244546	244546	Terrabacteria group	Actinobacteria	2.47192	58.6	chromosome:NZ_CP008913.1/CP008913.1	-	1	2159	2056	9/16/14	4/9/17	Complete Genome	Los Alamos National Laboratory	SAMN02902856	GCA_000755185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/185/GCA_000755185.1_ASM75518v1	25342684	ATCC 6931
Lihuaxuella thermophila	1173111	PRJEB16914	351051	Terrabacteria group	Firmicutes	3.80895	49	-	FOCQ01	40	3781	3625	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444955	GCA_900110165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/165/GCA_900110165.1_IMG-taxon_2675903160_annotated_assembly	-	DSM 46701
Paracoccus alcaliphilus	34002	PRJEB16926	351040	Proteobacteria	Alphaproteobacteria	4.61006	64.3	-	FODE01	129	4621	4239	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04489859	GCA_900110285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/285/GCA_900110285.1_IMG-taxon_2636415977_annotated_assembly	-	DSM 8512
Chryseobacterium taichungense	295069	PRJEB16887	350997	FCB group	Bacteroidetes/Chlorobi group	4.47893	36.5	-	FOBV01	31	4065	3928	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421856	GCA_900109935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/935/GCA_900109935.1_IMG-taxon_2675903154_annotated_assembly	-	DSM 17453
Halorientalis persicus	1367881	PRJEB16919	351046	Euryarchaeota	Halobacteria	4.86976	63.5	-	FOCX01	121	4986	4684	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216388	GCA_900110215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/215/GCA_900110215.1_IMG-taxon_2654588107_annotated_assembly	-	IBRC-M 10043
Cyclobacterium halophilum	1416801	PRJEB16820	350978	FCB group	Bacteroidetes/Chlorobi group	5.6621	48.4	-	FNZH01	30	4690	4572	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192553	GCA_900109255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/255/GCA_900109255.1_IMG-taxon_2651870114_annotated_assembly	-	IBRC-M 10761
Pedobacter rhizosphaerae	390241	PRJEB17018	351151	FCB group	Bacteroidetes/Chlorobi group	5.7893	39.3	-	FOGG01	83	4806	4656	10/29/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488023	GCA_900111155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/155/GCA_900111155.1_IMG-taxon_2622736586_annotated_assembly	-	DSM 18610
Terribacillus saccharophilus	361277	PRJNA395369	395369	Terrabacteria group	Firmicutes	3.55723	42.8	-	NPBV01	60	3571	3478	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372696	GCA_002271615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/615/GCA_002271615.1_assembly-7528_v1	-	7528
Fabibacter pacificus	1267423	PRJEB17017	351152	FCB group	Bacteroidetes/Chlorobi group	4.66077	42	-	FOIR01	7	4062	3994	10/29/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216290	GCA_900111145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/145/GCA_900111145.1_IMG-taxon_2667527390_annotated_assembly	-	CGMCC 1.12402
Natrinema salaciae	1186196	PRJEB16981	351122	Euryarchaeota	Halobacteria	4.85702	65	-	FOFD01	11	4690	4506	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04489841	GCA_900110865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/865/GCA_900110865.1_IMG-taxon_2639762573_annotated_assembly	-	DSM 25055
Propionibacterium cyclohexanicum	64702	PRJEB17011	351158	Terrabacteria group	Actinobacteria	2.80895	66.9	-	FOGZ01	58	2519	2412	10/29/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05443377	GCA_900111365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/365/GCA_900111365.1_IMG-taxon_2675903216_annotated_assembly	-	DSM 16859
Roseivivax marinus	1379903	PRJEB16844	350957	Proteobacteria	Alphaproteobacteria	4.01319	67.7	-	FOAI01	39	3730	3628	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444413	GCA_900109705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/705/GCA_900109705.1_IMG-taxon_2693429879_annotated_assembly	-	DSM 27511
[Clostridium] cocleatum	69824	PRJEB15836	347755	Terrabacteria group	Firmicutes	2.95711	28.5	-	FOIN01	88	2764	2570	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04489758	GCA_900102365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/365/GCA_900102365.1_IMG-taxon_2634166354_annotated_assembly	-	DSM 1551
Pseudospirillum japonicum	64971	PRJEB16774	350931	Proteobacteria	Gammaproteobacteria	2.74423	45.4	-	FNYH01	30	2458	2340	10/29/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421831	GCA_900108915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/915/GCA_900108915.1_IMG-taxon_2675903151_annotated_assembly	-	DSM 7165
Cribrihabitans marinus	1227549	PRJEB16783	350921	Proteobacteria	Alphaproteobacteria	4.17592	66	-	FNYD01	33	4046	3950	10/29/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444007	GCA_900109035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/035/GCA_900109035.1_IMG-taxon_2693429871_annotated_assembly	-	DSM 29340
Nitrosovibrio tenuis	1233	PRJEB16870	351013	Proteobacteria	Betaproteobacteria	3.09803	53.2	-	FOBH01	32	2848	2720	10/29/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216387	GCA_900109785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/785/GCA_900109785.1_IMG-taxon_2671180071_annotated_assembly	-	Nv1
Halohasta litchfieldiae	1073996	PRJEB16777	350928	Euryarchaeota	Halobacteria	3.28459	58.8	-	FNYR01	78	3358	3198	10/29/16	7/28/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444271	GCA_900109065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/065/GCA_900109065.1_IMG-taxon_2693429898_annotated_assembly	-	DSM 22187
Actinokineospora terrae	155974	PRJEB17020	351210	Terrabacteria group	Actinobacteria	7.58819	71	-	FOGI01	28	6662	6400	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487818	GCA_900111175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/175/GCA_900111175.1_IMG-taxon_2616644847_annotated_assembly	-	DSM 44260
Streptomyces radiopugnans	403935	PRJEB16976	351126	Terrabacteria group	Actinobacteria	6.06712	73.4	-	FOET01	40	5467	5174	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216481	GCA_900110735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/735/GCA_900110735.1_IMG-taxon_2663762755_annotated_assembly	-	CGMCC 4.3519
Methanococcoides vulcani	1353158	PRJEB17066	351142	Euryarchaeota	Methanomicrobia	2.31485	43.4	-	FOHQ01	15	2300	2164	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488587	GCA_900111645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/645/GCA_900111645.1_IMG-taxon_2642422537_annotated_assembly	-	SLH 33
Mucilaginibacter gossypiicola	551995	PRJEB16908	351056	FCB group	Bacteroidetes/Chlorobi group	8.22557	42.5	-	FOCL01	28	6826	6682	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192574	GCA_900110105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/105/GCA_900110105.1_IMG-taxon_2651870109_annotated_assembly	-	Gh-48
Amycolatopsis saalfeldensis	394193	PRJEB16942	351086	Terrabacteria group	Actinobacteria	9.86195	71	-	FOEF01	66	9140	8740	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04489732	GCA_900110575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/575/GCA_900110575.1_IMG-taxon_2634166333_annotated_assembly	-	DSM 44993
Natronincola peptidivorans	426128	PRJEB17061	351147	Terrabacteria group	Firmicutes	3.76898	35.5	-	FOHU01	56	3537	3427	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660297	GCA_900111615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/615/GCA_900111615.1_IMG-taxon_2599185224_annotated_assembly	-	DSM 18979
Megamonas sp. Marseille-P3344	1909671	PRJEB18027	354768	Terrabacteria group	Firmicutes	2.46702	31.9	-	FQRY01	7	2346	2158	12/2/16	4/17/17	Scaffold	URMITE	SAMEA4555823	GCA_900128435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/435/GCA_900128435.1_PRJEB18027	-	Marseille-P3344
Roseivirga seohaensis	1914963	PRJNA309617	309617	FCB group	Bacteroidetes/Chlorobi group	4.16033	39.3	-	LRPB01	49	3704	3638	3/16/16	8/3/17	Contig	"FACULTY OF BIOSCIENCES AND MEDICAL ENGINEERING, UNIVERSITI TEKNOLOGI MALAYSIA"	SAMN04423148	GCA_001592945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/945/GCA_001592945.1_ASM159294v1	-	SW-152
Chryseobacterium wanjuense	356305	PRJEB17039	351191	FCB group	Bacteroidetes/Chlorobi group	4.6684	36	-	FOIU01	9	4183	4087	10/29/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421841	GCA_900111495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/495/GCA_900111495.1_IMG-taxon_2684622833_annotated_assembly	-	DSM 17724
Rhizobium oryzae	464029	PRJEB16857	351034	Proteobacteria	Alphaproteobacteria	5.38879	62.8	-	FOAM01	52	4831	4646	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487976	GCA_900109605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/605/GCA_900109605.1_IMG-taxon_2617270885_annotated_assembly	-	CGMCC 1.7048
Loktanella fryxellensis	245187	PRJEB16903	351061	Proteobacteria	Alphaproteobacteria	3.55115	66.3	-	FOCI01	74	3440	3249	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488003	GCA_900110065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/065/GCA_900110065.1_IMG-taxon_2622736532_annotated_assembly	-	DSM 16213
Ruminococcaceae bacterium KH2T8	1855400	PRJEB17035	351195	Terrabacteria group	Firmicutes	2.91558	46.9	-	FOIY01	9	2638	2571	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216413	GCA_900111435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/435/GCA_900111435.1_IMG-taxon_2654588206_annotated_assembly	-	KH2T8
Roseovarius nanhaiticus	573024	PRJEB18908	360701	Proteobacteria	Alphaproteobacteria	3.69816	63.3	-	FTNV01	14	3540	3476	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421666	GCA_900156535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/535/GCA_900156535.1_IMG-taxon_2681812935_annotated_assembly	-	DSM 29590
Trichormus sp. NMC-1	1853259	PRJNA324543	324543	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.93815	39.3	-	LZQD01	58	5308	4876	10/31/16	4/13/17	Scaffold	"School of Agriculture, Yunnan University"	SAMN05208169	GCA_001858025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/025/GCA_001858025.1_ASM185802v1	27381465	NMC-1
Salinicola sp. MIT1003	1882734	PRJNA331154	331154	Proteobacteria	Gammaproteobacteria	4.01459	62.3	-	MCAP01	60	3640	3502	11/1/16	4/13/17	Contig	MIT	SAMN05438986	GCA_001858555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/555/GCA_001858555.1_ASM185855v1	-	MIT1003
Colwellia chukchiensis	641665	PRJNA380006	380006	Proteobacteria	Gammaproteobacteria	4.03517	41.9	-	NBOC01	44	3614	3477	4/21/17	4/24/17	Contig	"Third Institute Of Oceanography,State Oceanic Administration"	SAMN06626651	GCA_002104455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/455/GCA_002104455.1_ASM210445v1	-	CGMCC1.9127
Gemmobacter aquatilis	933059	PRJEB16899	350946	Proteobacteria	Alphaproteobacteria	3.96404	65.1	-	FOCE01	34	3874	3720	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488103	GCA_900110025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/025/GCA_900110025.1_IMG-taxon_2615840721_annotated_assembly	-	DSM 3857
bacterium A52C2	1855383	PRJEB16948	351090	unclassified Bacteria	unclassified Bacteria (miscellaneous)	4.19604	65.7	-	FOFG01	43	4064	3932	10/29/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216548	GCA_900110915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/915/GCA_900110915.1_IMG-taxon_2671180139_annotated_assembly	-	A52C2
Lewinella agarilytica	478744	PRJEB16972	351130	FCB group	Bacteroidetes/Chlorobi group	6.22081	52.2	-	FOFB01	74	4743	4649	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444359	GCA_900110645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/645/GCA_900110645.1_IMG-taxon_2693429910_annotated_assembly	-	DSM 24740
Niastella yeongjuensis	354355	PRJEB16922	351035	FCB group	Bacteroidetes/Chlorobi group	8.54656	44.5	-	FOCZ01	39	6874	6703	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660816	GCA_900110245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/245/GCA_900110245.1_IMG-taxon_2599185237_annotated_assembly	-	DSM 17621
Halomonas daqiaonensis	650850	PRJEB16863	351019	Proteobacteria	Gammaproteobacteria	3.71643	64	-	FOBC01	46	3488	3285	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488129	GCA_900109725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/725/GCA_900109725.1_IMG-taxon_2617270880_annotated_assembly	-	CGMCC 1.9150
Maribacter orientalis	228957	PRJEB16848	350963	FCB group	Bacteroidetes/Chlorobi group	4.16353	35.1	-	FNZN01	26	3680	3567	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488008	GCA_900109345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/345/GCA_900109345.1_IMG-taxon_2622736438_annotated_assembly	-	DSM 16471
Flavobacterium terrigena	402734	PRJEB16817	350990	FCB group	Bacteroidetes/Chlorobi group	3.17241	31.2	-	FNYA01	18	2882	2815	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660918	GCA_900108955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/955/GCA_900108955.1_IMG-taxon_2600255390_annotated_assembly	-	DSM 17934
Oceanobacillus limi	930131	PRJEB17060	351180	Terrabacteria group	Firmicutes	3.91384	37	-	FOHE01	51	3978	3812	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216389	GCA_900111445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/445/GCA_900111445.1_IMG-taxon_2654587897_annotated_assembly	-	IBRC-M 10780
Granulicatella balaenopterae	137733	PRJEB17016	351153	Terrabacteria group	Firmicutes	2.13597	33.9	-	FOGF01	94	1948	1848	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421767	GCA_900111135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/135/GCA_900111135.1_IMG-taxon_2684622850_annotated_assembly	-	DSM 15827
Halomonas aquamarina	77097	PRJEB16924	351042	Proteobacteria	Gammaproteobacteria	3.49721	56.7	-	FODB01	125	3421	3128	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04490369	GCA_900110265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/265/GCA_900110265.1_IMG-taxon_2639762508_annotated_assembly	-	558
Aquimarina amphilecti	1038014	PRJEB16824	350984	FCB group	Bacteroidetes/Chlorobi group	5.30987	32	-	FOAB01	16	4642	4552	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487910	GCA_900109375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/375/GCA_900109375.1_IMG-taxon_2622736580_annotated_assembly	-	DSM 25232
Lachnospiraceae bacterium NE2001	1520823	PRJEB16967	351073	Terrabacteria group	Firmicutes	3.72162	40.8	-	FOEK01	62	3124	2953	10/29/16	7/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910369	GCA_900110635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/635/GCA_900110635.1_IMG-taxon_2593339258_annotated_assembly	-	NE2001
Hydrogenoanaerobacterium saccharovorans	474960	PRJEB16901	351063	Terrabacteria group	Firmicutes	3.17892	42.7	-	FOCG01	12	2990	2893	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216180	GCA_900110045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/045/GCA_900110045.1_IMG-taxon_2667527384_annotated_assembly	-	CGMCC 1.5070
Flavobacterium sinopsychrotolerans	604089	PRJEB16936	351102	FCB group	Bacteroidetes/Chlorobi group	3.52095	34.2	-	FODN01	19	3101	3007	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487942	GCA_900110375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/375/GCA_900110375.1_IMG-taxon_2619618873_annotated_assembly	-	CGMCC 1.8704
Rosenbergiella nectarea	988801	PRJEB17013	351156	Proteobacteria	Gammaproteobacteria	3.29472	47.5	-	FOGC01	30	3260	3073	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216522	GCA_900111105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/105/GCA_900111105.1_IMG-taxon_2651870171_annotated_assembly	-	8N4
Pacificibacter marinus	658057	PRJEB16853	351028	Proteobacteria	Alphaproteobacteria	3.87073	52	-	FNZV01	43	3763	3633	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488032	GCA_900109555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/555/GCA_900109555.1_IMG-taxon_2622736522_annotated_assembly	-	DSM 25228
Ectothiorhodospira magna	867345	PRJEB16971	351131	Proteobacteria	Gammaproteobacteria	2.72134	60.9	-	FOFO01	58	2499	2324	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421693	GCA_900110965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/965/GCA_900110965.1_IMG-taxon_2675903141_annotated_assembly	-	B7-7
Giesbergeria anulus	180197	PRJEB17014	351155	Proteobacteria	Betaproteobacteria	3.42056	57.5	-	FOGD01	33	3200	3076	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02982919	GCA_900111115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/115/GCA_900111115.1_IMG-taxon_2597490351_annotated_assembly	-	ATCC 35958
Pasteurella skyensis	97481	PRJEB16876	351007	Proteobacteria	Gammaproteobacteria	2.19124	34.9	-	FOBN01	56	2120	2023	10/29/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444853	GCA_900109845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/845/GCA_900109845.1_IMG-taxon_2675903214_annotated_assembly	-	DSM 24204
Salisediminibacterium haloalkalitolerans	1464123	PRJEB16955	351074	Terrabacteria group	Firmicutes	2.93791	47.1	-	FOGV01	68	2830	2741	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444126	GCA_900111285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/285/GCA_900111285.1_IMG-taxon_2675903025_annotated_assembly	-	10nlg
Virgibacillus subterraneus	621109	PRJEB16953	351076	Terrabacteria group	Firmicutes	3.79109	37.4	-	FOEH01	14	3818	3674	10/29/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216232	GCA_900110695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/695/GCA_900110695.1_IMG-taxon_2671180086_annotated_assembly	-	CGMCC 1.7734
Methanobrevibacter gottschalkii	190974	PRJEB16839	350970	Euryarchaeota	Methanobacteria	1.86448	30.2	-	FOAK01	20	1893	1797	10/29/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216439	GCA_900109595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/595/GCA_900109595.1_IMG-taxon_2654588138_annotated_assembly	-	DSM 11978
Ignavigranum ruoffiae	89093	PRJEB16982	351121	Terrabacteria group	Firmicutes	1.95849	39.3	-	FOEN01	32	1910	1801	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488558	GCA_900110675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/675/GCA_900110675.1_IMG-taxon_2634166308_annotated_assembly	-	DSM 15695
Bhargavaea ginsengi	426757	PRJEB16796	350908	Terrabacteria group	Firmicutes	3.10116	53.8	-	FNZF01	14	3120	3013	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488127	GCA_900109165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/165/GCA_900109165.1_IMG-taxon_2617270926_annotated_assembly	-	CGMCC 1.6763
Pseudooceanicola nitratireducens	517719	PRJEB17206	351403	Proteobacteria	Alphaproteobacteria	4.06897	64.2	-	FOLX01	11	3882	3784	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421762	GCA_900112545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/545/GCA_900112545.1_IMG-taxon_2687453758_annotated_assembly	-	DSM 29619
Pseudomonas soli	1306993	PRJEB16975	351127	Proteobacteria	Gammaproteobacteria	5.64491	64	-	FOEQ01	34	5188	5033	10/29/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216230	GCA_900110655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/655/GCA_900110655.1_IMG-taxon_2663762771_annotated_assembly	-	LMG 27941
Rhodospirillales bacterium URHD0017	1380357	PRJEB16939	351099	Proteobacteria	Alphaproteobacteria	8.17914	66.2	-	FODP01	62	7972	7709	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02990966	GCA_900110395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/395/GCA_900110395.1_IMG-taxon_2590828823_annotated_assembly	-	URHD0017
Friedmanniella flava	1036181	PRJEB16996	351108	Terrabacteria group	Actinobacteria	4.78855	73.5	-	FOFA01	26	4438	4298	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421756	GCA_900110855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/855/GCA_900110855.1_IMG-taxon_2675903052_annotated_assembly	-	CGMCC 4.6856
Alkalibacterium pelagium	426702	PRJEB16841	350960	Terrabacteria group	Firmicutes	2.6389	42.5	-	FNZU01	34	2475	2370	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488099	GCA_900109325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/325/GCA_900109325.1_IMG-taxon_2619619008_annotated_assembly	-	DSM 19183
Salinibacillus kushneri	237682	PRJEB17044	351186	Terrabacteria group	Firmicutes	3.48869	37.4	-	FOHJ01	23	3528	3357	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421676	GCA_900111405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/405/GCA_900111405.1_IMG-taxon_2675903136_annotated_assembly	-	CGMCC 1.3566
Maribius pelagius	387096	PRJEB16909	351055	Proteobacteria	Alphaproteobacteria	3.85844	66.9	-	FOCM01	25	3805	3660	10/29/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488011	GCA_900110115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/115/GCA_900110115.1_IMG-taxon_2616644821_annotated_assembly	-	DSM 26893
Alkalibacterium putridalgicola	426703	PRJEB16874	351009	Terrabacteria group	Firmicutes	2.6004	43.2	-	FOBL01	72	2474	2350	10/29/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488100	GCA_900109825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/825/GCA_900109825.1_IMG-taxon_2619619007_annotated_assembly	-	DSM 19182
Frateuria terrea	529704	PRJEB17412	351597	Proteobacteria	Gammaproteobacteria	3.83814	67.9	-	FOXL01	16	3479	3362	10/30/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02927913	GCA_900115705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/705/GCA_900115705.1_IMG-taxon_2597490373_annotated_assembly	-	CGMCC 1.7053
Bacillus persicus	930146	PRJEB16886	350998	Terrabacteria group	Firmicutes	4.6434	39.9	-	FOBW01	40	4628	4393	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192533	GCA_900109925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/925/GCA_900109925.1_IMG-taxon_2651870116_annotated_assembly	-	"B48,IBRC-M 10115,DSM 25386,CECT 8001"
Lentzea flaviverrucosa	200379	PRJEB16997	351107	Terrabacteria group	Actinobacteria	9.47354	69.2	-	FOFT01	32	8933	8654	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216195	GCA_900110985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/985/GCA_900110985.1_IMG-taxon_2663762721_annotated_assembly	-	CGMCC 4.578
Nitrosomonas marina	917	PRJEB16912	351053	Proteobacteria	Betaproteobacteria	3.49691	46.4	-	FOCP01	69	3276	3136	10/29/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216325	GCA_900110145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/145/GCA_900110145.1_IMG-taxon_2671180082_annotated_assembly	-	Nm22
Paracoccus homiensis	364199	PRJEB17043	351187	Proteobacteria	Alphaproteobacteria	3.86826	63.8	-	FOHO01	39	3849	3717	10/29/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04489858	GCA_900111675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/675/GCA_900111675.1_IMG-taxon_2634166318_annotated_assembly	-	DSM 17862
Nitrosovibrio sp. Nv6	1855340	PRJEB16963	351067	Proteobacteria	Betaproteobacteria	3.26773	53.2	-	FODX01	19	3045	2917	10/29/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216316	GCA_900110495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/495/GCA_900110495.1_IMG-taxon_2675903143_annotated_assembly	-	Nv6
Lentzea albida	65499	PRJEB17001	351168	Terrabacteria group	Actinobacteria	9.44113	70.2	-	FOFV01	40	8800	8535	10/29/16	7/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488000	GCA_900111005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/005/GCA_900111005.1_IMG-taxon_2619619034_annotated_assembly	-	DSM 44437
Pseudomonas hussainii	1429083	PRJEB16845	350956	Proteobacteria	Gammaproteobacteria	3.68231	58.8	-	FOAS01	45	3502	3378	10/29/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216214	GCA_900109735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/735/GCA_900109735.1_IMG-taxon_2663763602_annotated_assembly	-	JCM 19513
[Clostridium] lavalense	460384	PRJEB15681	347456	Terrabacteria group	Firmicutes	6.4009	55.4	-	FOIM01	97	5877	5554	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216313	GCA_900102595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/595/GCA_900102595.1_IMG-taxon_2623620521_annotated_assembly	-	NLAE-zl-G277
Halomonas subterranea	416874	PRJEB16970	351132	Proteobacteria	Gammaproteobacteria	3.7342	58	-	FOGS01	26	3581	3458	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487958	GCA_900111305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/305/GCA_900111305.1_IMG-taxon_2617270764_annotated_assembly	-	CGMCC 1.6495
Amphritea atlantica	355243	PRJEB17012	351157	Proteobacteria	Gammaproteobacteria	4.73518	51.1	-	FOGB01	32	4396	4282	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03080615	GCA_900111095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/095/GCA_900111095.1_IMG-taxon_2599185211_annotated_assembly	-	DSM 18887
Lachnospiraceae bacterium A10	1520821	PRJEB16802	350944	Terrabacteria group	Firmicutes	2.51158	41.1	-	FNYN01	13	2327	2249	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910453	GCA_900109005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/005/GCA_900109005.1_IMG-taxon_2617270830_annotated_assembly	-	A10
Alkalibacterium gilvum	1130080	PRJEB16808	350938	Terrabacteria group	Firmicutes	2.1819	36.6	-	FNYW01	94	2138	1977	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488113	GCA_900109085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/085/GCA_900109085.1_IMG-taxon_2616644817_annotated_assembly	-	DSM 25751
Propionispira arboris	84035	PRJEB16799	350905	Terrabacteria group	Firmicutes	4.26161	38	-	FNZK01	40	4053	3858	10/29/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05660742	GCA_900109225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/225/GCA_900109225.1_IMG-taxon_2602042026_annotated_assembly	-	DSM 2179
Marinobacter segnicrescens	430453	PRJEB17056	351173	Proteobacteria	Gammaproteobacteria	4.21889	59.2	-	FOHZ01	85	3946	3763	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487962	GCA_900111555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/555/GCA_900111555.1_IMG-taxon_2617270929_annotated_assembly	-	CGMCC 1.6489
Aliiroseovarius sediminilitoris	1173584	PRJEB16889	350995	Proteobacteria	Alphaproteobacteria	3.41346	58.7	-	FOJB01	6	3336	3256	10/29/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444851	GCA_900109955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/955/GCA_900109955.1_IMG-taxon_2687453744_annotated_assembly	-	DSM 29439
[Clostridium] fimetarium	99656	PRJEB17026	351204	Terrabacteria group	Firmicutes	4.56818	33.6	-	FOJI01	48	4128	4016	10/29/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421659	GCA_900111235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/235/GCA_900111235.1_IMG-taxon_2675903166_annotated_assembly	-	DSM 9179
Lachnospiraceae bacterium RM5	1200721	PRJEB16950	351079	Terrabacteria group	Firmicutes	2.35211	31.9	-	FOFK01	23	2045	1943	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910289	GCA_900110975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/975/GCA_900110975.1_IMG-taxon_2593339164_annotated_assembly	-	RM5
Solimonas aquatica	489703	PRJEB17002	351167	Proteobacteria	Gammaproteobacteria	4.42706	66.1	-	FOFS01	31	3962	3844	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488038	GCA_900111015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/015/GCA_900111015.1_IMG-taxon_2616644811_annotated_assembly	-	DSM 25927
Syntrophus gentianae	43775	PRJEB16881	351003	Proteobacteria	delta/epsilon subdivisions	3.71669	52.6	-	FOBS01	71	3435	3282	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04489760	GCA_900109885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/885/GCA_900109885.1_IMG-taxon_2634166346_annotated_assembly	-	DSM 8423
Jannaschia helgolandensis	188906	PRJEB16834	350966	Proteobacteria	Alphaproteobacteria	3.56286	62.2	-	FNZQ01	14	3562	3423	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488526	GCA_900109285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/285/GCA_900109285.1_IMG-taxon_2622736446_annotated_assembly	-	DSM 14858
Corynebacterium cystitidis DSM 20524	1121357	PRJEB17029	351201	Terrabacteria group	Actinobacteria	2.94877	57	-	FOGQ01	40	2785	2605	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05661109	GCA_900111265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/265/GCA_900111265.1_IMG-taxon_2599185266_annotated_assembly	-	DSM 20524
Xiangella phaseoli	1144548	PRJEB16803	350943	Terrabacteria group	Actinobacteria	6.50714	71.3	-	FNYV01	30	5943	5686	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05443287	GCA_900109115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/115/GCA_900109115.1_IMG-taxon_2675903138_annotated_assembly	-	CGMCC 4.7038
Piscibacillus halophilus	571933	PRJEB16959	351080	Terrabacteria group	Firmicutes	2.993	36.7	-	FOES01	83	3162	2971	10/29/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216362	GCA_900110685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/685/GCA_900110685.1_IMG-taxon_2654587883_annotated_assembly	-	DSM 21633
Bosea lupini	1036779	PRJEB16864	351018	Proteobacteria	Alphaproteobacteria	6.12808	66.7	-	FOAN01	24	5956	5821	10/29/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04515666	GCA_900109525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/525/GCA_900109525.1_IMG-taxon_2634166302_annotated_assembly	-	"LMG 26383,CCUG 61248,R- 45681"
bacterium A37T11	1855384	PRJEB16882	351002	unclassified Bacteria	unclassified Bacteria (miscellaneous)	5.0924	43.1	-	FOBR01	60	4299	4150	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216436	GCA_900109895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/895/GCA_900109895.1_IMG-taxon_2671180114_annotated_assembly	-	A37T11
Blastococcus endophyticus	673521	PRJEB16898	350947	Terrabacteria group	Actinobacteria	4.87522	74.6	-	FOEE01	35	4625	4465	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660991	GCA_900110555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/555/GCA_900110555.1_IMG-taxon_2599185194_annotated_assembly	-	DSM 45413
Prevotella aff. ruminicola Tc2-24	81582	PRJEB16979	351133	FCB group	Bacteroidetes/Chlorobi group	2.91711	49	-	FOIQ01	8	2428	2357	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487850	GCA_900110895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/895/GCA_900110895.1_IMG-taxon_2623621022_annotated_assembly	-	TC2-24
[Clostridium] polysaccharolyticum	29364	PRJEB17055	351174	Terrabacteria group	Firmicutes	3.45834	36.7	-	FOHN01	54	3058	2908	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487772	GCA_900111595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/595/GCA_900111595.1_IMG-taxon_2606217760_annotated_assembly	-	DSM 1801
Roseivivax roseus	641238	PRJEB16978	351134	Proteobacteria	Alphaproteobacteria	4.23346	67.8	-	FOGU01	31	4065	3947	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04490244	GCA_900111315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/315/GCA_900111315.1_IMG-taxon_2634166309_annotated_assembly	-	DSM 23042
Pseudomonas linyingensis	915471	PRJEB16805	350941	Proteobacteria	Gammaproteobacteria	4.72112	66.4	-	FNZE01	43	4399	4236	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216201	GCA_900109175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/175/GCA_900109175.1_IMG-taxon_2663762776_annotated_assembly	-	LMG 25967
Flavobacterium urocaniciphilum	1299341	PRJEB16947	351091	FCB group	Bacteroidetes/Chlorobi group	2.84811	30.6	-	FOEI01	23	2575	2503	10/29/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444005	GCA_900110615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/615/GCA_900110615.1_IMG-taxon_2693429864_annotated_assembly	-	DSM 27078
Peptostreptococcus russellii	215200	PRJEB16927	351039	Terrabacteria group	Firmicutes	2.12622	30.8	-	FODF01	58	1876	1803	10/29/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216454	GCA_900110295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/295/GCA_900110295.1_IMG-taxon_2654588127_annotated_assembly	-	Calf135
Chitinophaga rupis	573321	PRJEB16856	351025	FCB group	Bacteroidetes/Chlorobi group	8.38712	47.5	-	FOBB01	23	6529	6410	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488505	GCA_900109685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/685/GCA_900109685.1_IMG-taxon_2622736599_annotated_assembly	-	DSM 21039
Aquisalimonas asiatica	406100	PRJEB16949	351089	Proteobacteria	Gammaproteobacteria	4.03791	66	-	FOEG01	27	3735	3636	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488052	GCA_900110585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/585/GCA_900110585.1_IMG-taxon_2617270766_annotated_assembly	-	CGMCC 1.6291
Rhodanobacter glycinis	582702	PRJEB17426	351644	Proteobacteria	Gammaproteobacteria	3.86594	64.9	-	FOSR01	29	3387	3278	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192579	GCA_900114325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/325/GCA_900114325.1_IMG-taxon_2651870113_annotated_assembly	-	MO64
Parapedobacter indicus	1477437	PRJEB17362	351549	FCB group	Bacteroidetes/Chlorobi group	6.15523	48	-	FOQO01	33	5059	4946	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444682	GCA_900113765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/765/GCA_900113765.1_IMG-taxon_2671180231_annotated_assembly	-	RK1
Ruminobacter amylophilus	867	PRJEB17364	351547	Proteobacteria	Gammaproteobacteria	2.81506	42.7	-	FOXF01	117	2392	2211	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910344	GCA_900115655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/655/GCA_900115655.1_IMG-taxon_2595698241_annotated_assembly	-	DSM 1361
Methylobacterium brachiatum	269660	PRJEB17373	351538	Proteobacteria	Alphaproteobacteria	5.80724	69.8	-	FOQW01	48	5535	5354	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02799642	GCA_900113845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/845/GCA_900113845.1_IMG-taxon_2590828855_annotated_assembly	-	111MFTsu3.1M4
Corynebacterium spheniscorum	185761	PRJEB17327	351504	Terrabacteria group	Actinobacteria	2.45551	57.5	-	FOPJ01	27	2185	2079	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660282	GCA_900113445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/445/GCA_900113445.1_IMG-taxon_2599185219_annotated_assembly	-	"J11, PG 39"
Halobacillus alkaliphilus	396056	PRJEB17280	351481	Terrabacteria group	Firmicutes	4.09253	41.6	-	FOOG01	93	4058	3887	10/30/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216353	GCA_900113125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/125/GCA_900113125.1_IMG-taxon_2654587900_annotated_assembly	-	FP5
Algibacter pectinivorans	870482	PRJEB17211	351399	FCB group	Bacteroidetes/Chlorobi group	3.64936	33.4	-	FOMI01	21	3161	3073	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487987	GCA_900112595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/595/GCA_900112595.1_IMG-taxon_2615840709_annotated_assembly	-	DSM 25730
Sporolactobacillus nakayamae	269670	PRJEB17308	351531	Terrabacteria group	Firmicutes	3.53888	43.8	-	FOOY01	48	3461	3293	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02982927	GCA_900113325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/325/GCA_900113325.1_IMG-taxon_2597490367_annotated_assembly	-	ATCC 700379
Olleya namhaensis	1144750	PRJEB17389	351581	FCB group	Bacteroidetes/Chlorobi group	3.52297	32.7	-	FORM01	36	3187	3118	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443431	GCA_900114005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/005/GCA_900114005.1_IMG-taxon_2693429874_annotated_assembly	-	DSM 28881
Pseudomonas guineae	425504	PRJEB17360	351551	Proteobacteria	Gammaproteobacteria	4.14959	58.5	-	FOQL01	10	3847	3748	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216206	GCA_900113745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/745/GCA_900113745.1_IMG-taxon_2667527413_annotated_assembly	-	LMG 24016
Nitrosomonas nitrosa	52442	PRJEB17482	351669	Proteobacteria	Betaproteobacteria	3.15487	47.3	-	FOUF01	78	2862	2715	10/31/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421880	GCA_900114795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/795/GCA_900114795.1_IMG-taxon_2671180218_annotated_assembly	-	Nm146
Thalassobius aestuarii	254406	PRJEB17466	351686	Proteobacteria	Alphaproteobacteria	4.22667	60.4	-	FOTQ01	27	4111	3993	10/31/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488042	GCA_900114635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/635/GCA_900114635.1_IMG-taxon_2616644822_annotated_assembly	-	DSM 15283
Muricauda antarctica	1055723	PRJEB18350	355808	FCB group	Bacteroidetes/Chlorobi group	4.4844	45.2	-	FRAT01	20	4056	3957	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216293	GCA_900142405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/405/GCA_900142405.1_IMG-taxon_2671180021_annotated_assembly	-	CGMCC 1.12174
Parafilimonas terrae	1465490	PRJEB17438	351633	FCB group	Bacteroidetes/Chlorobi group	4.98541	39.6	-	FOXQ01	44	4259	4158	10/31/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444277	GCA_900115755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/755/GCA_900115755.1_IMG-taxon_2693429887_annotated_assembly	-	DSM 28286
Jannaschia pohangensis	390807	PRJEB17375	351536	Proteobacteria	Alphaproteobacteria	3.73304	65.5	-	FORA01	18	3790	3689	10/30/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488095	GCA_900113875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/875/GCA_900113875.1_IMG-taxon_2622736536_annotated_assembly	-	DSM 19073
Methanolobus profundi	487685	PRJEB17486	351665	Euryarchaeota	Methanomicrobia	3.1072	42.6	-	FOUJ01	18	2925	2834	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488696	GCA_900114835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/835/GCA_900114835.1_IMG-taxon_2642422540_annotated_assembly	-	Mob M
Streptomyces alni	380248	PRJEB17245	351425	Terrabacteria group	Actinobacteria	8.2701	72.1	-	FONG01	50	7095	6739	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216251	GCA_900112845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/845/GCA_900112845.1_IMG-taxon_2667527403_annotated_assembly	-	CGMCC 4.3510
Yuhushiella deserti	587909	PRJEB17297	351453	Terrabacteria group	Actinobacteria	5.95516	72.7	-	FOWW01	23	5644	5383	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421810	GCA_900115565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/565/GCA_900115565.1_IMG-taxon_2675903051_annotated_assembly	-	CGMCC 4.5579
Oceanisphaera psychrotolerans	1414654	PRJNA338900	338900	Proteobacteria	Gammaproteobacteria	3.81954	58.7	-	MDKE01	70	3488	3096	11/7/16	4/13/17	Contig	Institute of Agricultural Resources and Regional Planning	SAMN05573647	GCA_001870485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/485/GCA_001870485.1_ASM187048v1	-	LAM-WHM-ZC
Rhodobaca barguzinensis	441209	PRJNA341262	341262	Proteobacteria	Alphaproteobacteria	3.89364	59	-	MEHS01	5	3712	3592	11/7/16	4/17/17	Contig	Institute of Microbiology CAS	SAMN05717329	GCA_001870665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/665/GCA_001870665.1_ASM187066v1	-	alga05
Roseinatronobacter thiooxidans	121821	PRJNA341263	341263	Proteobacteria	Alphaproteobacteria	3.50491	60.3	-	MEHT01	50	3369	3260	11/7/16	4/17/17	Scaffold	Institute of Microbiology CAS	SAMN05717330	GCA_001870675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/675/GCA_001870675.1_ASM187067v1	-	ALG1
Lachnospiraceae bacterium C7	1792306	PRJEB17320	351511	Terrabacteria group	Firmicutes	2.84451	32.1	-	FOPE01	91	2554	2375	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487761	GCA_900113385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/385/GCA_900113385.1_IMG-taxon_2608642107_annotated_assembly	-	C7
Streptosporangium canum	324952	PRJEB17374	351537	Terrabacteria group	Actinobacteria	9.2738	70.7	-	FOQY01	91	8505	8018	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216275	GCA_900113865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/865/GCA_900113865.1_IMG-taxon_2667527412_annotated_assembly	-	CGMCC 4.2126
Acidovorax wautersii	1177982	PRJEB17268	351483	Proteobacteria	Betaproteobacteria	5.33559	68.4	-	FONX01	55	4786	4629	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04489711	GCA_900113035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/035/GCA_900113035.1_IMG-taxon_2634166330_annotated_assembly	-	DSM 27981
Pseudonocardia ammonioxydans	260086	PRJEB17120	351328	Terrabacteria group	Actinobacteria	7.36151	73.5	-	FOUY01	167	6978	6561	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216207	GCA_900115005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/005/GCA_900115005.1_IMG-taxon_2671180038_annotated_assembly	-	CGMCC 4.1877
Halogranum rubrum	553466	PRJEB17446	351625	Euryarchaeota	Halobacteria	4.56668	62.2	-	FOTC01	17	4530	4374	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487950	GCA_900114455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/455/GCA_900114455.1_IMG-taxon_2619618990_annotated_assembly	-	CGMCC 1.7738
Parapedobacter composti	623281	PRJEB17183	351304	FCB group	Bacteroidetes/Chlorobi group	4.62202	50	-	FOLL01	61	3914	3796	10/31/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421747	GCA_900112315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/315/GCA_900112315.1_IMG-taxon_2675903219_annotated_assembly	-	DSM 22900
Clostridium uliginosum	119641	PRJEB17199	351291	Terrabacteria group	Firmicutes	4.08097	28.1	-	FOMG01	78	3570	3377	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421842	GCA_900112485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/485/GCA_900112485.1_IMG-taxon_2675903229_annotated_assembly	-	DSM 12992
Fructobacillus durionis	283737	PRJEB17192	351306	Terrabacteria group	Firmicutes	1.32739	44.7	-	FOLI01	17	1299	1229	10/30/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05660453	GCA_900112405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/405/GCA_900112405.1_IMG-taxon_2603880187_annotated_assembly	-	DSM 19113
Albimonas pacifica	1114924	PRJEB17355	351556	Proteobacteria	Alphaproteobacteria	6.0272	72.9	-	FOQH01	68	5330	5168	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216258	GCA_900113695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/695/GCA_900113695.1_IMG-taxon_2667527406_annotated_assembly	-	CGMCC 1.11030
Lachnospiraceae bacterium XBB1006	1520827	PRJEB17178	351350	Terrabacteria group	Firmicutes	2.72198	42.1	-	FOXT01	40	2636	2505	10/30/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910358	GCA_900115795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/795/GCA_900115795.1_IMG-taxon_2593339157_annotated_assembly	-	XBB1006
Peptostreptococcaceae bacterium pGA-8	1520829	PRJEB17255	351415	Terrabacteria group	Firmicutes	1.7849	39.4	-	FONK01	24	1732	1601	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910327	GCA_900112915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/915/GCA_900112915.1_IMG-taxon_2593339213_annotated_assembly	-	pGA-8
Pisciglobus halotolerans	745365	PRJEB17352	351559	Terrabacteria group	Firmicutes	2.43743	38.7	-	FOQE01	88	2298	2123	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04489868	GCA_900113675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/675/GCA_900113675.1_IMG-taxon_2634166901_annotated_assembly	-	DSM 27630
Myroides guanonis	1150112	PRJEB17396	351575	FCB group	Bacteroidetes/Chlorobi group	3.14013	33.3	-	FORU01	33	2707	2607	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487893	GCA_900114085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/085/GCA_900114085.1_IMG-taxon_2622736509_annotated_assembly	-	DSM 26542
Pontibacter chinhatensis	1436961	PRJEB17303	351526	FCB group	Bacteroidetes/Chlorobi group	5.07266	52	-	FOOT01	25	4304	4224	10/30/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421739	GCA_900113285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/285/GCA_900113285.1_IMG-taxon_2671180224_annotated_assembly	-	LP51
Arsenicibacter rosenii	1750698	PRJNA351726	351726	FCB group	Bacteroidetes/Chlorobi group	7.56002	51.5	-	MORL01	346	6143	5931	11/7/16	4/13/17	Scaffold	Nanjing Agricultural University	SAMN05953464	GCA_001870735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/735/GCA_001870735.1_ASM187073v1	-	SM-1
Desulfotomaculum arcticum	341036	PRJEB17310	351520	Terrabacteria group	Firmicutes	5.21533	45.7	-	FOOX01	55	5101	4865	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660649	GCA_900113335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/335/GCA_900113335.1_IMG-taxon_2599185230_annotated_assembly	-	DSM 17038
Pseudoalteromonas denitrificans DSM 6059	1123010	PRJEB17168	351361	Proteobacteria	Gammaproteobacteria	6.09417	34.8	-	FOLO01	130	5389	5121	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745724	GCA_900112265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/265/GCA_900112265.1_IMG-taxon_2599185267_annotated_assembly	-	DSM 6059
Alkalibacterium subtropicum	753702	PRJEB17198	351292	Terrabacteria group	Firmicutes	2.49145	44.1	-	FOLT01	33	2340	2255	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488102	GCA_900112455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/455/GCA_900112455.1_IMG-taxon_2616644818_annotated_assembly	-	DSM 23664
Brevinema andersonii	34097	PRJEB17155	351375	Spirochaetes	Spirochaetia	1.5014	35.2	-	FOKY01	39	1501	1439	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745150	GCA_900112165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/165/GCA_900112165.1_IMG-taxon_2597490362_annotated_assembly	-	ATCC 43811
Kushneria avicenniae	402385	PRJEB17203	351406	Proteobacteria	Gammaproteobacteria	3.60533	60.3	-	FOLY01	16	3300	3214	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421848	GCA_900112585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/585/GCA_900112585.1_IMG-taxon_2684623008_annotated_assembly	-	DSM 23439
Shimia haliotis	1280847	PRJEB17441	351630	Proteobacteria	Alphaproteobacteria	3.99597	58	-	FOSZ01	22	3910	3824	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488036	GCA_900114415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/415/GCA_900114415.1_IMG-taxon_2619619046_annotated_assembly	-	DSM 28453
Tropicimonas isoalkanivorans	441112	PRJEB17180	351359	Proteobacteria	Alphaproteobacteria	4.97664	64.6	-	FOLG01	51	4813	4639	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488094	GCA_900112335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/335/GCA_900112335.1_IMG-taxon_2615840715_annotated_assembly	-	DSM 19548
Cellulomonas marina	988821	PRJEB17109	351339	Terrabacteria group	Actinobacteria	3.96263	75.6	-	FOKA01	33	3518	3327	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421867	GCA_900111925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/925/GCA_900111925.1_IMG-taxon_2675903053_annotated_assembly	-	CGMCC 4.6945
Pseudomonas formosensis	1002526	PRJEB17491	351660	Proteobacteria	Gammaproteobacteria	3.44347	62.7	-	FOYD01	28	3209	3082	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216578	GCA_900115905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/905/GCA_900115905.1_IMG-taxon_2663762775_annotated_assembly	-	JCM 18415
Flavobacterium swingsii	498292	PRJEB17087	351703	FCB group	Bacteroidetes/Chlorobi group	2.5738	32.6	-	FOJT01	10	2410	2350	10/30/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05660845	GCA_900111965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/965/GCA_900111965.1_IMG-taxon_2599185297_annotated_assembly	-	DSM 21789
Algoriphagus ornithinivorans	226506	PRJEB17162	351367	FCB group	Bacteroidetes/Chlorobi group	4.09344	39.5	-	FOVW01	23	3580	3516	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488519	GCA_900115305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/305/GCA_900115305.1_IMG-taxon_2622736437_annotated_assembly	-	DSM 15282
Pedobacter suwonensis	332999	PRJEB17065	351143	FCB group	Bacteroidetes/Chlorobi group	5.80383	39.5	-	FOJM01	40	4885	4754	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488511	GCA_900111825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/825/GCA_900111825.1_IMG-taxon_2622736524_annotated_assembly	-	DSM 18130
Salibacterium qingdaonense	266892	PRJEB17474	351677	Terrabacteria group	Firmicutes	3.51674	47.5	-	FOTY01	68	3589	3409	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488054	GCA_900114715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/715/GCA_900114715.1_IMG-taxon_2617270910_annotated_assembly	-	CGMCC 1.6134
Xenorhabdus mauleonii	351675	PRJEB17382	351588	Proteobacteria	Gammaproteobacteria	5.11981	43.9	-	FORG01	94	4471	4179	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421680	GCA_900113945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/945/GCA_900113945.1_IMG-taxon_2684622849_annotated_assembly	-	DSM 17908
Flexibacter flexilis DSM 6793	927664	PRJEB17173	351355	FCB group	Bacteroidetes/Chlorobi group	4.24997	42.4	-	FOLE01	48	3598	3505	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421780	GCA_900112255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/255/GCA_900112255.1_IMG-taxon_2675903165_annotated_assembly	-	DSM 6793
Xenorhabdus japonica	53341	PRJEB17111	351337	Proteobacteria	Gammaproteobacteria	3.5612	42.7	-	FOVO01	92	3283	2976	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421579	GCA_900115195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/195/GCA_900115195.1_IMG-taxon_2684622846_annotated_assembly	-	DSM 16522
Salegentibacter agarivorans	345907	PRJEB17282	351466	FCB group	Bacteroidetes/Chlorobi group	4.29857	36.8	-	FOOH01	56	3792	3646	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488033	GCA_900113135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/135/GCA_900113135.1_IMG-taxon_2622736526_annotated_assembly	-	DSM 23515
Algoriella xinjiangensis	684065	PRJEB17121	351327	FCB group	Bacteroidetes/Chlorobi group	3.26591	30.9	-	FOUZ01	44	3072	2968	10/30/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421738	GCA_900115015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/015/GCA_900115015.1_IMG-taxon_2675903033_annotated_assembly	-	XJ109
Neptunomonas qingdaonensis	1045558	PRJEB17302	351527	Proteobacteria	Gammaproteobacteria	4.44979	46.2	-	FOOU01	35	4040	3898	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216175	GCA_900113275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/275/GCA_900113275.1_IMG-taxon_2663762747_annotated_assembly	-	CGMCC 1.10971
Nitrosomonas aestuarii	52441	PRJEB17424	351646	Proteobacteria	Betaproteobacteria	3.99403	44.4	-	FOSP01	116	3725	3530	10/31/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216302	GCA_900114305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/305/GCA_900114305.1_IMG-taxon_2671180137_annotated_assembly	-	Nm69
Planifilum fulgidum	201973	PRJEB17288	351460	Terrabacteria group	Firmicutes	3.38234	58.5	-	FOOK01	62	3425	3223	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488025	GCA_900113175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/175/GCA_900113175.1_IMG-taxon_2615840724_annotated_assembly	-	DSM 44945
Acidovorax konjaci	32040	PRJEB17221	351449	Proteobacteria	Betaproteobacteria	5.07753	68.2	-	FOMQ01	36	4485	4327	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04489710	GCA_900112675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/675/GCA_900112675.1_IMG-taxon_2634166315_annotated_assembly	-	DSM 7481
Chryseobacterium oleae	491207	PRJEB17127	351321	FCB group	Bacteroidetes/Chlorobi group	5.28469	38	-	FOVD01	16	4726	4630	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421594	GCA_900115055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/055/GCA_900115055.1_IMG-taxon_2684622910_annotated_assembly	-	DSM 25575
Amycolatopsis marina	490629	PRJEB17095	351699	Terrabacteria group	Actinobacteria	7.0207	68.2	-	FOKG01	59	6619	6372	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216266	GCA_900111885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/885/GCA_900111885.1_IMG-taxon_2667527405_annotated_assembly	-	CGMCC 4.3568
Alteribacillus iranensis	930128	PRJEB17267	351484	Terrabacteria group	Firmicutes	3.31614	41.7	-	FONT01	21	3257	3137	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192532	GCA_900113025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/025/GCA_900113025.1_IMG-taxon_2651870176_annotated_assembly	-	DSM 23995
Thermodesulforhabdus norvegica	39841	PRJEB17116	351332	Proteobacteria	delta/epsilon subdivisions	2.80834	49.8	-	FOUU01	22	2731	2631	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660836	GCA_900114975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/975/GCA_900114975.1_IMG-taxon_2599185149_annotated_assembly	-	DSM 9990
Paraburkholderia megapolitana	420953	PRJEB17369	351542	Proteobacteria	Betaproteobacteria	7.60732	62.1	-	FOQU01	32	6695	6540	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05192543	GCA_900113825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/825/GCA_900113825.1_IMG-taxon_2671180118_annotated_assembly	-	LMG 23650
Loktanella salsilacus	195913	PRJEB17451	351620	Proteobacteria	Alphaproteobacteria	4.13016	60	-	FOTF01	77	3974	3773	10/31/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488004	GCA_900114485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/485/GCA_900114485.1_IMG-taxon_2622736595_annotated_assembly	-	DSM 16199
Nocardioides alpinus	748909	PRJEB17102	351346	Terrabacteria group	Actinobacteria	4.59676	70.9	-	FOKC01	22	4341	4209	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192575	GCA_900112035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/035/GCA_900112035.1_IMG-taxon_2663762717_annotated_assembly	-	CGMCC 1.10697
Methylobacterium salsuginis	414703	PRJEB17431	351640	Proteobacteria	Alphaproteobacteria	5.32377	69.6	-	FOSV01	64	5000	4742	11/1/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488125	GCA_900114375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/375/GCA_900114375.1_IMG-taxon_2617270908_annotated_assembly	-	CGMCC 1.6474
Gracilibacillus orientalis	334253	PRJEB17467	351685	Terrabacteria group	Firmicutes	4.61182	36.3	-	FOTR01	29	4336	4171	10/30/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487943	GCA_900114645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/645/GCA_900114645.1_IMG-taxon_2617270768_annotated_assembly	-	CGMCC 1.4250
Halolactibacillus halophilus	306540	PRJEB17316	351514	Terrabacteria group	Firmicutes	2.7041	38.4	-	FOXC01	95	2647	2543	10/30/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421839	GCA_900115605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/605/GCA_900115605.1_IMG-taxon_2675903232_annotated_assembly	-	DSM 17073
Thermoflexibacter ruber	1003	PRJEB17270	351480	FCB group	Bacteroidetes/Chlorobi group	5.50418	37.7	-	FONY01	123	4492	4304	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488541	GCA_900113045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/045/GCA_900113045.1_IMG-taxon_2636415974_annotated_assembly	-	"GEY, DSM 9560"
Trichococcus palustris	140314	PRJEB12707	317997	Terrabacteria group	Firmicutes	2.95566	45.7	-	FJNE01	17	2825	2632	4/11/16	5/31/17	Scaffold	WAGENINGEN UNIVERSITY	SAMEA3869530	GCA_900067125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/067/125/GCA_900067125.1_ASM90006712v1	-	-
Pseudosphingobacterium domesticum	407022	PRJEB16827	350981	FCB group	Bacteroidetes/Chlorobi group	6.7805	38.9	-	FOAF01	23	5572	5456	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05661044	GCA_900109575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/575/GCA_900109575.1_IMG-taxon_2599185177_annotated_assembly	-	DSM 18733
Roseateles sp. YR242	1855305	PRJEB16813	350994	Proteobacteria	Betaproteobacteria	5.97663	65.9	-	FOAV01	38	5044	4887	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216359	GCA_900109745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/745/GCA_900109745.1_IMG-taxon_2615840637_annotated_assembly	-	YR242
Loktanella koreensis	364200	PRJEB16842	350959	Proteobacteria	Alphaproteobacteria	3.64823	57.2	-	FOIZ01	4	3604	3542	10/29/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488515	GCA_900109295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/295/GCA_900109295.1_IMG-taxon_2619619643_annotated_assembly	-	DSM 17925
Dyadobacter koreensis	408657	PRJEB16775	350930	FCB group	Bacteroidetes/Chlorobi group	7.34009	41.3	-	FNXY01	18	6118	5966	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487995	GCA_900108855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/855/GCA_900108855.1_IMG-taxon_2622736476_annotated_assembly	-	DSM 19938
Deinococcus reticulitermitis	856736	PRJEB16810	350987	Terrabacteria group	Deinococcus-Thermus	3.50113	68.6	-	FNZA01	58	3377	3173	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488058	GCA_900109185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/185/GCA_900109185.1_IMG-taxon_2617270904_annotated_assembly	-	CGMCC 1.10218
Amphibacillus marinus	872970	PRJEB16933	351094	Terrabacteria group	Firmicutes	3.46852	38.6	-	FODJ01	29	3312	3214	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488134	GCA_900110345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/345/GCA_900110345.1_IMG-taxon_2617270769_annotated_assembly	-	CGMCC 1.10434
Bifidobacterium breve JCM 7019	1385940	PRJNA214951	214951	Terrabacteria group	Actinobacteria	2.35901	58.6	chromosome:NZ_CP006713.1/CP006713.1	-	1	2133	1919	2/14/14	4/2/17	Complete Genome	University College Cork	SAMN03081480	GCA_000569015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/015/GCA_000569015.1_ASM56901v1	-	JCM 7019
Gloeomargarita lithophora Alchichica-D10	1188229	PRJNA348305	348305	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.04928	52.2	chromosome:NZ_CP017675.1/CP017675.1	-	1	3086	2929	11/7/16	4/17/17	Chromosome	universite paris-sud/paris-saclay	SAMN05853575	GCA_001870225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/225/GCA_001870225.1_ASM187022v1	-	D10
Hyunsoonleella jejuensis	419940	PRJEB17003	351166	FCB group	Bacteroidetes/Chlorobi group	3.48031	34.6	-	FOFN01	11	2990	2918	10/29/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421824	GCA_900111025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/025/GCA_900111025.1_IMG-taxon_2684622907_annotated_assembly	-	DSM 21035
Rhodopseudomonas pseudopalustris	1513892	PRJEB16943	351085	Proteobacteria	Alphaproteobacteria	5.27246	64.6	-	FODT01	28	4838	4685	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444123	GCA_900110435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/435/GCA_900110435.1_IMG-taxon_2671180228_annotated_assembly	-	DSM 123
Hymenobacter actinosclerus	82805	PRJEB17038	351192	FCB group	Bacteroidetes/Chlorobi group	4.40521	62	-	FOHS01	17	3735	3634	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487998	GCA_900111515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/515/GCA_900111515.1_IMG-taxon_2622736539_annotated_assembly	-	DSM 15310
Carnobacterium iners	1073423	PRJEB20437	382936	Terrabacteria group	Firmicutes	2.57135	34.3	-	FXBJ01	3	2418	2208	4/21/17	5/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488700	GCA_900177385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/385/GCA_900177385.1_IMG-taxon_2622736627_annotated_assembly	-	LMG26642
Desulfomicrobium norvegicum	52561	PRJEB17462	351690	Proteobacteria	delta/epsilon subdivisions	4.353	58.8	-	FOTO01	45	3860	3726	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421830	GCA_900114595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/595/GCA_900114595.1_IMG-taxon_2675903163_annotated_assembly	-	DSM 1741
Lentibacillus persicus	640948	PRJEB17226	351444	Terrabacteria group	Firmicutes	3.31455	42.7	-	FOMR01	23	3338	3223	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216238	GCA_900112705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/705/GCA_900112705.1_IMG-taxon_2651870107_annotated_assembly	-	DSM 22530
Lachnospiraceae bacterium KH1T2	1855374	PRJEB17434	351637	Terrabacteria group	Firmicutes	3.87125	39.4	-	FOSY01	63	3448	3276	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216390	GCA_900114405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/405/GCA_900114405.1_IMG-taxon_2654588176_annotated_assembly	-	KH1T2
Formivibrio citricus	83765	PRJEB17128	351320	Proteobacteria	Betaproteobacteria	3.07247	58.8	-	FOVE01	44	2836	2714	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05660284	GCA_900115065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/065/GCA_900115065.1_IMG-taxon_2599185172_annotated_assembly	-	DSM 6150
Chryseobacterium treverense	631455	PRJEB17392	351579	FCB group	Bacteroidetes/Chlorobi group	2.37928	39.5	-	FORQ01	10	2243	2178	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421638	GCA_900114045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/045/GCA_900114045.1_IMG-taxon_2687453775_annotated_assembly	-	DSM 22251
Desulfomicrobium apsheronum	52560	PRJEB17399	351572	Proteobacteria	delta/epsilon subdivisions	4.25408	57.8	-	FORX01	45	3799	3633	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488082	GCA_900114115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/115/GCA_900114115.1_IMG-taxon_2622736590_annotated_assembly	-	DSM 5918
Amycolatopsis sacchari	115433	PRJEB17390	351591	Terrabacteria group	Actinobacteria	7.58747	71.3	-	FORP01	72	7335	7097	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421835	GCA_900114035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/035/GCA_900114035.1_IMG-taxon_2675903226_annotated_assembly	-	DSM 44468
Sanguibacter marinus	285351	PRJEB17271	351479	Terrabacteria group	Actinobacteria	2.89975	72	-	FONZ01	11	2686	2597	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488035	GCA_900113055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/055/GCA_900113055.1_IMG-taxon_2622736429_annotated_assembly	-	DSM 19083
Flavobacterium xueshanense	935223	PRJEB17261	351490	FCB group	Bacteroidetes/Chlorobi group	3.47105	34.1	-	FONQ01	34	3126	2959	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488131	GCA_900112975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/975/GCA_900112975.1_IMG-taxon_2617270785_annotated_assembly	-	CGMCC 1.9227
Eubacterium callanderi	53442	PRJEB17213	351397	Terrabacteria group	Firmicutes	4.369	47.2	-	FOWI01	24	4206	4084	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487888	GCA_900115415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/415/GCA_900115415.1_IMG-taxon_2623620475_annotated_assembly	-	NLAE-zl-G225
Aquamicrobium aerolatum DSM 21857	1121003	PRJEB17381	351589	Proteobacteria	Alphaproteobacteria	3.64021	60.1	-	FORF01	49	3533	3384	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03080618	GCA_900113935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/935/GCA_900113935.1_IMG-taxon_2595699008_annotated_assembly	-	DSM 21857
Fontimonas thermophila	1076937	PRJEB17274	351476	Proteobacteria	Gammaproteobacteria	2.73354	65.2	-	FOOC01	28	2564	2451	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488120	GCA_900113085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/085/GCA_900113085.1_IMG-taxon_2622736503_annotated_assembly	-	DSM 23609
Marinobacter persicus	930118	PRJEB17403	351605	Proteobacteria	Gammaproteobacteria	3.15878	58.4	-	FOSC01	24	2960	2851	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216429	GCA_900114155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/155/GCA_900114155.1_IMG-taxon_2651870104_annotated_assembly	-	IBRC-M 10445
Saccharopolyspora antimicrobica	455193	PRJEB17494	351657	Terrabacteria group	Actinobacteria	8.21932	70.4	-	FOUP01	43	7602	7366	10/30/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421805	GCA_900114905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/905/GCA_900114905.1_IMG-taxon_2675903057_annotated_assembly	-	CPCC 201259
Marinobacter zhejiangensis	488535	PRJEB17480	351671	Proteobacteria	Gammaproteobacteria	4.02926	57.7	-	FOUE01	12	3685	3599	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487963	GCA_900114775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/775/GCA_900114775.1_IMG-taxon_2617270916_annotated_assembly	-	CGMCC 1.7061
Roseovarius lutimaris	1005928	PRJEB17149	351381	Proteobacteria	Alphaproteobacteria	4.28367	59.9	-	FOVP01	72	4193	3980	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487859	GCA_900115165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/165/GCA_900115165.1_IMG-taxon_2622736530_annotated_assembly	-	DSM 28463
Halanaerobium salsuginis	29563	PRJEB17457	351614	Terrabacteria group	Firmicutes	2.99119	32.7	-	FOTI01	100	2864	2715	10/31/16	7/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02983006	GCA_900114545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/545/GCA_900114545.1_IMG-taxon_2597490369_annotated_assembly	-	ATCC 51327
Thermoflavimicrobium dichotomicum	46223	PRJEB17393	351578	Terrabacteria group	Firmicutes	3.85279	42.5	-	FORR01	77	3673	3444	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421852	GCA_900114055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/055/GCA_900114055.1_IMG-taxon_2675903228_annotated_assembly	-	DSM 44778
Lachnospiraceae bacterium NLAE-zl-G231	1855376	PRJEB17342	351569	Terrabacteria group	Firmicutes	7.25954	46.9	-	FOPX01	17	6293	6133	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216405	GCA_900113595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/595/GCA_900113595.1_IMG-taxon_2657245270_annotated_assembly	-	NLAE-zl-G231
Pelosinus propionicus DSM 13327	1123291	PRJEB17464	351688	Terrabacteria group	Firmicutes	5.41366	38.8	-	FOTS01	134	5175	4879	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04490355	GCA_900114615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/615/GCA_900114615.1_IMG-taxon_2636416028_annotated_assembly	-	DSM 13327
Actinopolyspora alba	673379	PRJEB17235	351435	Terrabacteria group	Actinobacteria	5.24064	67.6	-	FOMZ01	42	4710	4505	10/30/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487819	GCA_900112765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/765/GCA_900112765.1_IMG-taxon_2619619028_annotated_assembly	-	DSM 45004
Massilia yuzhufengensis	1164594	PRJEB17110	351338	Proteobacteria	Betaproteobacteria	5.58024	65.6	-	FOLD01	64	4969	4749	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216204	GCA_900112225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/225/GCA_900112225.1_IMG-taxon_2667527446_annotated_assembly	-	CGMCC 1.12041
Trichococcus flocculiformis	82803	PRJEB12705	317993	Terrabacteria group	Firmicutes	3.07264	45.7	-	FJMZ01	91	3075	2780	5/28/16	5/31/17	Scaffold	WAGENINGEN UNIVERSITY	SAMEA3869528	GCA_900067465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/067/465/GCA_900067465.1_ASM90006746v1	-	-
Planctomicrobium piriforme	1576369	PRJEB17351	351560	PVC group	Planctomycetes	6.317	58.8	-	FOQD01	41	5168	5047	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421753	GCA_900113665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/665/GCA_900113665.1_IMG-taxon_2675903691_annotated_assembly	-	DSM 26348
Sphingomonas rubra	634430	PRJEB17437	351634	Proteobacteria	Alphaproteobacteria	3.2002	68.8	-	FOXP01	25	3100	2966	10/31/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488241	GCA_900115745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/745/GCA_900115745.1_IMG-taxon_2617270762_annotated_assembly	-	CGMCC 1.9113
Dyella marensis	500610	PRJEB17247	351423	Proteobacteria	Gammaproteobacteria	5.00558	67.2	-	FONH01	44	4381	4275	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02799615	GCA_900112865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/865/GCA_900112865.1_IMG-taxon_2593339196_annotated_assembly	-	UNC178MFTsu3.1
Aureimonas phyllosphaerae	1166078	PRJEB17272	351478	Proteobacteria	Alphaproteobacteria	4.71569	67.5	-	FOOA01	62	4454	4305	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216566	GCA_900113065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/065/GCA_900113065.1_IMG-taxon_2654587881_annotated_assembly	-	"L9-753,KACC 16231,DSM 25026"
Anaerocolumna aminovalerica	1527	PRJEB17176	351352	Terrabacteria group	Firmicutes	4.62418	35	-	FOWD01	83	4083	3887	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04489757	GCA_900115365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/365/GCA_900115365.1_IMG-taxon_2634166351_annotated_assembly	-	DSM 1283
Halobiforma haloterrestris	148448	PRJEB17125	351323	Euryarchaeota	Halobacteria	4.49544	65.4	-	FOKW01	31	4336	4149	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444422	GCA_900112205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/205/GCA_900112205.1_IMG-taxon_2693429869_annotated_assembly	-	DSM 13078
Clostridium frigidicarnis	84698	PRJEB17093	351707	Terrabacteria group	Firmicutes	4.33741	28.5	-	FOKI01	112	3890	3695	10/30/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488528	GCA_900111985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/985/GCA_900111985.1_IMG-taxon_2634166358_annotated_assembly	-	DSM 12271
Ruminococcaceae bacterium D5	1520815	PRJEB17387	351583	Terrabacteria group	Firmicutes	2.63601	56.9	-	FORK01	49	2590	2444	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910435	GCA_900113995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/995/GCA_900113995.1_IMG-taxon_2593339255_annotated_assembly	-	D5
Spirosoma endophyticum	662367	PRJEB17189	351298	FCB group	Bacteroidetes/Chlorobi group	8.51234	48	-	FOLQ01	83	7303	7001	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216167	GCA_900112365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/365/GCA_900112365.1_IMG-taxon_2622736583_annotated_assembly	-	DSM 26130
Verrucosispora sediminis	547162	PRJEB17182	351305	Terrabacteria group	Actinobacteria	6.40761	71	-	FOLJ01	34	5854	5616	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216284	GCA_900112325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/325/GCA_900112325.1_IMG-taxon_2663762750_annotated_assembly	-	CGMCC 4.3550
Pseudomonas pachastrellae	254161	PRJEB17479	351672	Proteobacteria	Gammaproteobacteria	3.93469	61.2	-	FOUD01	55	3713	3539	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216256	GCA_900114765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/765/GCA_900114765.1_IMG-taxon_2663763599_annotated_assembly	-	JCM 12285
Candidatus Desantisbacteria bacterium CG1_02_38_46	1817893	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	1.72847	38.5	-	MNUO01	133	1783	1618	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328222	GCA_001871015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/015/GCA_001871015.1_ASM187101v1	27112493	-
Gallionellaceae bacterium CG1_02_56_997	1805161	PRJNA297582	297582	Proteobacteria	Betaproteobacteria	1.86156	55	-	MNXC01	327	1930	1674	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328244	GCA_001871025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/025/GCA_001871025.1_ASM187102v1	27112493	-
Deltaproteobacteria bacterium CG1_02_45_11	1805124	PRJNA297582	297582	Proteobacteria	delta/epsilon subdivisions	1.00507	45.3	-	MNUN01	149	970	825	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328204	GCA_001871035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/035/GCA_001871035.1_ASM187103v1	27112493	-
Candidatus Desantisbacteria bacterium CG1_02_49_89	1817894	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	2.48165	48.9	-	MNUP01	150	2128	1954	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328223	GCA_001871075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/075/GCA_001871075.1_ASM187107v1	27112493	-
Desulfovibrionaceae bacterium CG1_02_65_16	1805130	PRJNA297582	297582	Proteobacteria	delta/epsilon subdivisions	2.97016	65.2	-	MNUQ01	185	2765	2551	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328205	GCA_001871085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/085/GCA_001871085.1_ASM187108v1	27112493	-
Elusimicrobia bacterium CG1_02_56_21	1805132	PRJNA297582	297582	Elusimicrobia	unclassified Elusimicrobia	2.99039	56.3	-	MNUR01	139	2756	2580	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328207	GCA_001871115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/115/GCA_001871115.1_ASM187111v1	27112493	-
Elusimicrobia bacterium CG1_02_37_114	1805131	PRJNA297582	297582	Elusimicrobia	unclassified Elusimicrobia	2.08828	37	-	MNXB01	130	2208	2053	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328241	GCA_001871125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/125/GCA_001871125.1_ASM187112v1	27112493	-
Elusimicrobia bacterium CG1_02_63_36	1805133	PRJNA297582	297582	Elusimicrobia	unclassified Elusimicrobia	3.38127	62.7	-	MNUS01	252	3183	2868	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328208	GCA_001871155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/155/GCA_001871155.1_ASM187115v1	27112493	-
Candidatus Falkowbacteria bacterium CG1_02_37_21	1805145	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.696515	37.5	-	MNUT01	32	701	640	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328182	GCA_001871165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/165/GCA_001871165.1_ASM187116v1	27112493	-
Zetaproteobacteria bacterium CG1_02_55_237	1805428	PRJNA297582	297582	Proteobacteria	Zetaproteobacteria	2.32874	55.4	-	MNXA01	54	2332	2209	11/9/16	11/9/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04328214	GCA_001871195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/195/GCA_001871195.1_ASM187119v1	27112493	-
Candidatus Falkowbacteria bacterium CG1_02_37_44	1805146	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.814327	36.6	-	MNUU01	82	865	746	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328183	GCA_001871205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/205/GCA_001871205.1_ASM187120v1	27112493	-
Candidatus Falkowbacteria bacterium CG1_02_41_21	1805147	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.635779	40.6	-	MNUV01	61	682	615	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328191	GCA_001871235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/235/GCA_001871235.1_ASM187123v1	27112493	-
Gallionellaceae bacterium CG1_02_60_325	1805162	PRJNA297582	297582	Proteobacteria	Betaproteobacteria	0.955885	60.3	-	MNUX01	139	1029	866	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328236	GCA_001871255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/255/GCA_001871255.1_ASM187125v1	27112493	-
Flavobacteriaceae bacterium CG1_02_35_72	1805158	PRJNA297582	297582	FCB group	Bacteroidetes/Chlorobi group	2.45823	35	-	MNUW01	156	2268	2082	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328209	GCA_001871275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/275/GCA_001871275.1_ASM187127v1	27112493	-
Candidatus Gottesmanbacteria bacterium CG1_02_37_22	1805209	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	1.03543	37.3	-	MNUY01	84	1063	959	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328229	GCA_001871285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/285/GCA_001871285.1_ASM187128v1	27112493	-
Helicobacteraceae bacterium CG1_02_36_14	1805214	PRJNA297582	297582	Proteobacteria	delta/epsilon subdivisions	2.31817	36	-	MNUZ01	135	2402	2263	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328237	GCA_001871315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/315/GCA_001871315.1_ASM187131v1	27112493	-
Ignavibacteria bacterium CG1_02_37_35	1805220	PRJNA297582	297582	FCB group	Bacteroidetes/Chlorobi group	3.65962	37.2	-	MNVA01	242	3246	3009	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328210	GCA_001871325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/325/GCA_001871325.1_ASM187132v1	27112493	-
Zetaproteobacteria bacterium CG1_02_49_23	1805426	PRJNA297582	297582	Proteobacteria	Zetaproteobacteria	2.75038	49.5	-	MNWY01	117	2700	2550	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328212	GCA_001871355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/355/GCA_001871355.1_ASM187135v1	27112493	-
Candidatus Kuenenbacteria bacterium CG1_02_38_13	1805235	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.713886	37.5	-	MNVB01	75	691	607	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328185	GCA_001871365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/365/GCA_001871365.1_ASM187136v1	27112493	-
Betaproteobacteria bacterium CG2_30_59_46	1805050	PRJNA297582	297582	Proteobacteria	Betaproteobacteria	2.29362	58.8	-	MNXT01	425	2456	2077	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328309	GCA_001871385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/385/GCA_001871385.1_ASM187138v1	27112493	-
Candidatus Woesearchaeota archaeon CG1_02_57_44	1805424	PRJNA297582	297582	DPANN group	Candidatus Woesearchaeota	1.53466	57.1	-	MNWW01	77	1472	1378	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328224	GCA_001871415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/415/GCA_001871415.1_ASM187141v1	27112493	-
Candidatus Magasanikbacteria bacterium CG1_02_32_51	1805238	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.83716	32.3	-	MNVC01	48	827	749	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328179	GCA_001871435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/435/GCA_001871435.1_ASM187143v1	27112493	-
Candidatus Magasanikbacteria bacterium CG1_02_41_34	1805239	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	1.0406	41.2	-	MNVD01	36	1038	950	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328193	GCA_001871445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/445/GCA_001871445.1_ASM187144v1	27112493	-
Candidatus Micrarchaeota archaeon CG1_02_47_40	1805247	PRJNA297582	297582	DPANN group	Candidatus Micrarchaeota	1.15462	47	-	MNVE01	16	1183	1150	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328173	GCA_001871475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/475/GCA_001871475.1_ASM187147v1	27112493	-
Candidatus Micrarchaeota archaeon CG1_02_51_15	1805249	PRJNA297582	297582	DPANN group	Candidatus Micrarchaeota	1.13294	50.6	-	MNVG01	56	1330	1244	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328221	GCA_001871495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/495/GCA_001871495.1_ASM187149v1	27112493	-
Comamonadaceae bacterium CG2_30_57_122	1805089	PRJNA297582	297582	Proteobacteria	Betaproteobacteria	2.94995	57.3	-	MNXW01	336	2932	2621	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328306	GCA_001871515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/515/GCA_001871515.1_ASM187151v1	27112493	-
Hydrogenophilaceae bacterium CG1_02_62_390	1805218	PRJNA297582	297582	Proteobacteria	Hydrogenophilalia	2.26764	61.7	-	MNXE01	70	2265	2131	11/9/16	11/9/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04328242	GCA_001871525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/525/GCA_001871525.1_ASM187152v1	27112493	-
Candidatus Micrarchaeota archaeon CG1_02_49_24	1805248	PRJNA297582	297582	DPANN group	Candidatus Micrarchaeota	1.1786	49.2	-	MNVF01	116	1222	1159	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328169	GCA_001871535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/535/GCA_001871535.1_ASM187153v1	27112493	-
Caldisericum sp. CG2_30_36_11	1805053	PRJNA297582	297582	Caldiserica	Caldisericia	1.22154	35.5	-	MNXV01	95	1301	1169	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328255	GCA_001871575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/575/GCA_001871575.1_ASM187157v1	27112493	-
Candidatus Micrarchaeota archaeon CG1_02_55_22	1805250	PRJNA297582	297582	DPANN group	Candidatus Micrarchaeota	1.19285	54.7	-	MNVH01	73	1268	1162	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328170	GCA_001871595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/595/GCA_001871595.1_ASM187159v1	27112493	-
Candidatus Micrarchaeota archaeon CG1_02_55_41	1805251	PRJNA297582	297582	DPANN group	Candidatus Micrarchaeota	0.744456	54.6	-	MNVI01	50	856	768	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328171	GCA_001871605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/605/GCA_001871605.1_ASM187160v1	27112493	-
Candidatus Wolfebacteria bacterium CG1_02_39_135	1805425	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.427692	38.8	-	MNWX01	46	486	414	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328186	GCA_001871625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/625/GCA_001871625.1_ASM187162v1	27112493	-
Candidatus Micrarchaeota archaeon CG1_02_60_51	1805252	PRJNA297582	297582	DPANN group	Candidatus Micrarchaeota	0.833428	59.8	-	MNVJ01	59	938	849	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328172	GCA_001871655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/655/GCA_001871655.1_ASM187165v1	27112493	-
Nitrospirae bacterium CG1_02_44_142	1805276	PRJNA297582	297582	Nitrospirae	unclassified Nitrospirae	1.79352	43.9	-	MNVK01	138	1980	1839	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328216	GCA_001871685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/685/GCA_001871685.1_ASM187168v1	27112493	-
Candidatus Hydrogenedentes bacterium CG1_02_42_14	1805216	PRJNA297582	297582	FCB group	Candidatus Hydrogenedentes	2.32617	42.2	-	MNVL01	250	2208	2019	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328174	GCA_001871695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/695/GCA_001871695.1_ASM187169v1	27112493	-
Armatimonadetes bacterium CG2_30_66_41	1805028	PRJNA297582	297582	Terrabacteria group	Armatimonadetes	8.44956	66.1	-	MNXN01	631	6792	6231	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328252	GCA_001871675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/675/GCA_001871675.1_ASM187167v1	27112493	-
Candidatus Nomurabacteria bacterium CG1_02_31_12	1805280	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.414845	30.9	-	MNVM01	39	441	390	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328178	GCA_001871725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/725/GCA_001871725.1_ASM187172v1	27112493	-
Candidatus Nomurabacteria bacterium CG1_02_43_90	1805281	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.681623	43	-	MNVN01	22	774	705	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328233	GCA_001871765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/765/GCA_001871765.1_ASM187176v1	27112493	-
Candidatus Nomurabacteria bacterium CG1_02_47_685	1805282	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.842166	46.5	-	MNVO01	66	917	835	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328200	GCA_001871775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/775/GCA_001871775.1_ASM187177v1	27112493	-
Actinobacteria bacterium CG2_30_50_142	1803498	PRJNA297582	297582	Terrabacteria group	Actinobacteria	2.15692	50	-	MNXI01	152	2101	1948	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328288	GCA_001871795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/795/GCA_001871795.1_ASM187179v1	27112493	-
Candidatus Omnitrophica bacterium CG1_02_40_15	1805284	PRJNA297582	297582	PVC group	Candidatus Omnitrophica	1.169	39.6	-	MNVP01	92	1140	1055	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328226	GCA_001871815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/815/GCA_001871815.1_ASM187181v1	27112493	-
Candidatus Beckwithbacteria bacterium CG2_30_44_31	1805035	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.471552	43.3	-	MNXQ01	53	592	526	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328274	GCA_001871835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/835/GCA_001871835.1_ASM187183v1	27112493	-
Anaerolineae bacterium CG2_30_64_16	1805005	PRJNA297582	297582	Terrabacteria group	Chloroflexi	3.98509	63.7	-	MNXL01	409	3555	3224	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328259	GCA_001871755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/755/GCA_001871755.1_ASM187175v1	27112493	-
Candidatus Omnitrophica bacterium CG1_02_41_171	1805285	PRJNA297582	297582	PVC group	Candidatus Omnitrophica	0.924845	40.7	-	MNVQ01	130	973	864	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328232	GCA_001871865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/865/GCA_001871865.1_ASM187186v1	27112493	-
Alphaproteobacteria bacterium CG1_02_46_17	1803508	PRJNA297582	297582	Proteobacteria	Alphaproteobacteria	2.06587	46.7	-	MNUG01	40	2066	1983	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328168	GCA_001871905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/905/GCA_001871905.1_ASM187190v1	27112493	-
Anaerolineae bacterium CG1_02_58_13	1805002	PRJNA297582	297582	Terrabacteria group	Chloroflexi	2.36202	57.3	-	MNUH01	457	2559	2052	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328177	GCA_001871895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/895/GCA_001871895.1_ASM187189v1	27112493	-
Comamonadaceae bacterium CG1_02_60_18	1805088	PRJNA297582	297582	Proteobacteria	Betaproteobacteria	3.16126	59.8	-	MNUL01	133	2976	2806	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328176	GCA_001871935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/935/GCA_001871935.1_ASM187193v1	27112493	-
Zetaproteobacteria bacterium CG1_02_53_45	1805427	PRJNA297582	297582	Proteobacteria	Zetaproteobacteria	2.44501	53.2	-	MNWZ01	171	2435	2231	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328213	GCA_001871925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/925/GCA_001871925.1_ASM187192v1	27112493	-
Candidatus Gracilibacteria bacterium CG1_02_38_174	1805210	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.989898	37.8	-	MNXD01	72	896	843	11/9/16	11/9/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04328243	GCA_001871945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/945/GCA_001871945.1_ASM187194v1	27112493	-
bacterium CG1_02_42_9	1805399	PRJNA297582	297582	unclassified Bacteria	unclassified Bacteria (miscellaneous)	0.771475	42.3	-	MNUM01	125	816	670	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328194	GCA_001871995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/871/995/GCA_001871995.1_ASM187199v1	27112493	-
Candidatus Collierbacteria bacterium CG1_02_44_10	1805087	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.641908	43.7	-	MNUK01	83	729	636	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328198	GCA_001872005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/005/GCA_001872005.1_ASM187200v1	27112493	-
Candidatus Berkelbacteria bacterium CG1_02_42_45	1805036	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.581518	42	-	MNUJ01	61	637	553	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328196	GCA_001872015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/015/GCA_001872015.1_ASM187201v1	27112493	-
Candidatus Beckwithbacteria bacterium CG1_02_47_37	1805034	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.770971	46.9	-	MNUI01	86	946	838	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328215	GCA_001872035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/035/GCA_001872035.1_ASM187203v1	27112493	-
Candidatus Omnitrophica bacterium CG1_02_49_16	1805290	PRJNA297582	297582	PVC group	Candidatus Omnitrophica	0.956248	49.2	-	MNVU01	81	968	884	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328227	GCA_001872105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/105/GCA_001872105.1_ASM187210v1	27112493	-
Candidatus Pacearchaeota archaeon CG1_02_30_18	1805293	PRJNA297582	297582	DPANN group	Candidatus Pacearchaeota	0.555162	30	-	MNVV01	37	722	660	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328217	GCA_001872125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/125/GCA_001872125.1_ASM187212v1	27112493	-
Candidatus Pacearchaeota archaeon CG1_02_31_27	1805294	PRJNA297582	297582	DPANN group	Candidatus Pacearchaeota	0.777415	31.3	-	MNVW01	48	862	779	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328166	GCA_001872145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/145/GCA_001872145.1_ASM187214v1	27112493	-
Anaerolineae bacterium CG2_30_58_95	1805004	PRJNA297582	297582	Terrabacteria group	Chloroflexi	1.47436	58	-	MNXK01	243	1633	1395	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328258	GCA_001872165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/165/GCA_001872165.1_ASM187216v1	27112493	-
Candidatus Pacearchaeota archaeon CG1_02_32_21	1805296	PRJNA297582	297582	DPANN group	Candidatus Pacearchaeota	0.676359	31.6	-	MNVX01	40	826	759	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328218	GCA_001872185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/185/GCA_001872185.1_ASM187218v1	27112493	-
Parcubacteria group bacterium CG1_02_36_42	1805301	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.398517	35.6	-	MNWB01	49	468	402	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328180	GCA_001872205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/205/GCA_001872205.1_ASM187220v1	27112493	-
Parcubacteria group bacterium CG1_02_37_13	1805302	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.687496	36.9	-	MNWC01	54	731	653	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328181	GCA_001872225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/225/GCA_001872225.1_ASM187222v1	27112493	-
Parcubacteria group bacterium CG1_02_37_51	1805303	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.83017	36.6	-	MNWD01	88	843	738	11/9/16	11/9/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04328184	GCA_001872245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/245/GCA_001872245.1_ASM187224v1	27112493	-
Parcubacteria group bacterium CG1_02_39_15	1805304	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.555297	39.5	-	MNWE01	48	629	538	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328187	GCA_001872265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/265/GCA_001872265.1_ASM187226v1	27112493	-
Betaproteobacteria bacterium CG2_30_68_42	1805051	PRJNA297582	297582	Proteobacteria	Betaproteobacteria	3.09877	68.2	-	MNXU01	95	2994	2853	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328305	GCA_001872285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/285/GCA_001872285.1_ASM187228v1	27112493	-
Parcubacteria group bacterium CG1_02_40_25	1805305	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.651023	39.5	-	MNWF01	54	699	620	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328189	GCA_001872305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/305/GCA_001872305.1_ASM187230v1	27112493	-
Candidatus Pacearchaeota archaeon CG1_02_35_32	1805297	PRJNA297582	297582	DPANN group	Candidatus Pacearchaeota	0.852308	35.1	-	MNVY01	24	1075	1013	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328219	GCA_001872325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/325/GCA_001872325.1_ASM187232v1	27112493	-
Candidatus Pacearchaeota archaeon CG1_02_39_14	1805298	PRJNA297582	297582	DPANN group	Candidatus Pacearchaeota	0.687729	39.2	-	MNVZ01	35	874	807	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328220	GCA_001872315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/315/GCA_001872315.1_ASM187231v1	27112493	-
Candidatus Pacebacteria bacterium CG1_02_43_31	1805299	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.947625	34	-	MNWA01	35	982	919	11/9/16	11/9/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04328197	GCA_001872335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/335/GCA_001872335.1_ASM187233v1	27112493	-
Parcubacteria group bacterium CG1_02_40_82	1805306	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.637227	40.3	-	MNWG01	42	660	597	11/9/16	11/9/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04328188	GCA_001872385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/385/GCA_001872385.1_ASM187238v1	27112493	-
Parcubacteria group bacterium CG1_02_42_13	1805309	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.400823	42.3	-	MNWJ01	47	443	367	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328195	GCA_001872405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/405/GCA_001872405.1_ASM187240v1	27112493	-
Parcubacteria group bacterium CG1_02_41_26	1805308	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.759879	41.4	-	MNWI01	87	877	779	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328192	GCA_001872425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/425/GCA_001872425.1_ASM187242v1	27112493	-
Parcubacteria group bacterium CG1_02_41_12	1805307	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.692593	41	-	MNWH01	70	732	658	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328190	GCA_001872435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/435/GCA_001872435.1_ASM187243v1	27112493	-
Anaerolineae bacterium CG2_30_57_67	1805003	PRJNA297582	297582	Terrabacteria group	Chloroflexi	2.99396	56.7	-	MNXJ01	87	2702	2597	11/9/16	11/9/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04328257	GCA_001872455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/455/GCA_001872455.1_ASM187245v1	27112493	-
Parcubacteria group bacterium CG1_02_44_65	1805311	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.579085	44.1	-	MNWL01	96	654	527	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328167	GCA_001872495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/495/GCA_001872495.1_ASM187249v1	27112493	-
Parcubacteria group bacterium CG1_02_44_31	1805310	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.527314	43.6	-	MNWK01	37	547	485	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328199	GCA_001872485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/485/GCA_001872485.1_ASM187248v1	27112493	-
Parcubacteria group bacterium CG1_02_50_68	1805312	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.494858	50	-	MNWM01	33	560	497	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328201	GCA_001872505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/505/GCA_001872505.1_ASM187250v1	27112493	-
Parcubacteria group bacterium CG1_02_58_44	1805313	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	1.06124	58.1	-	MNWN01	51	1020	936	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328175	GCA_001872545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/545/GCA_001872545.1_ASM187254v1	27112493	-
Candidatus Peregrinibacteria bacterium CG1_02_41_10	1805322	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.44577	40.8	-	MNWO01	51	440	373	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328234	GCA_001872565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/565/GCA_001872565.1_ASM187256v1	27112493	-
Candidatus Peregrinibacteria bacterium CG1_02_54_53	1805323	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	1.36821	54.2	-	MNWP01	42	1337	1257	11/9/16	11/9/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04328202	GCA_001872575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/575/GCA_001872575.1_ASM187257v1	27112493	-
Armatimonadetes bacterium CG2_30_59_28	1805027	PRJNA297582	297582	Terrabacteria group	Armatimonadetes	5.48849	58.5	-	MNXM01	344	4479	4278	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328248	GCA_001872605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/605/GCA_001872605.1_ASM187260v1	27112493	-
Bacteroidetes bacterium CG2_30_33_31	1805033	PRJNA297582	297582	FCB group	Bacteroidetes/Chlorobi group	2.87433	32.9	-	MNXP01	76	2386	2270	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328254	GCA_001872625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/625/GCA_001872625.1_ASM187262v1	27112493	-
Candidatus Berkelbacteria bacterium CG2_30_43_20	1805038	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.706471	43	-	MNXS01	42	758	687	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328297	GCA_001872655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/655/GCA_001872655.1_ASM187265v1	27112493	-
Candidatus Berkelbacteria bacterium CG2_30_39_44	1805037	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.582114	39.3	-	MNXR01	52	636	559	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328270	GCA_001872695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/695/GCA_001872695.1_ASM187269v1	27112493	-
Candidatus Marinimicrobia bacterium CG1_02_48_14	1805240	PRJNA297582	297582	FCB group	Candidatus Marinimicrobia	3.02255	47.8	-	MNWS01	277	2708	2371	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328203	GCA_001872685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/685/GCA_001872685.1_ASM187268v1	27112493	-
Verrucomicrobia bacterium CG1_02_43_26	1805421	PRJNA297582	297582	PVC group	Verrucomicrobia	1.83989	43.4	-	MNWT01	25	1737	1664	11/9/16	11/9/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04328238	GCA_001872735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/735/GCA_001872735.1_ASM187273v1	27112493	-
Proteobacteria bacterium CG1_02_64_396	1805333	PRJNA297582	297582	Proteobacteria	unclassified Proteobacteria	2.94226	62.9	-	MNWR01	109	2680	2532	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328211	GCA_001872725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/725/GCA_001872725.1_ASM187272v1	27112493	-
Candidatus Woesearchaeota archaeon CG1_02_33_12	1805422	PRJNA297582	297582	DPANN group	Candidatus Woesearchaeota	0.906308	33.3	-	MNWU01	117	1039	929	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328239	GCA_001872765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/765/GCA_001872765.1_ASM187276v1	27112493	-
Candidatus Omnitrophica bacterium CG1_02_43_210	1805286	PRJNA297582	297582	PVC group	Candidatus Omnitrophica	1.28923	42.7	-	MNXF01	65	1280	1177	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328245	GCA_001872775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/775/GCA_001872775.1_ASM187277v1	27112493	-
Candidatus Pacearchaeota archaeon CG1_02_32_132	1805295	PRJNA297582	297582	DPANN group	Candidatus Pacearchaeota	0.772921	34.3	-	MNXG01	37	936	872	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328240	GCA_001872795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/795/GCA_001872795.1_ASM187279v1	27112493	-
Candidatus Woesearchaeota archaeon CG1_02_47_18	1805423	PRJNA297582	297582	DPANN group	Candidatus Woesearchaeota	0.968541	47	-	MNWV01	92	912	855	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328225	GCA_001872825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/825/GCA_001872825.1_ASM187282v1	27112493	-
Comamonadaceae bacterium CG2_30_59_20	1805090	PRJNA297582	297582	Proteobacteria	Betaproteobacteria	3.50273	59.4	-	MNXX01	187	3558	3299	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328307	GCA_001872845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/845/GCA_001872845.1_ASM187284v1	27112493	-
Gallionellaceae bacterium CG1_02_60_948	1805163	PRJNA297582	297582	Proteobacteria	Betaproteobacteria	0.776045	59.8	-	MNXH01	91	836	737	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328246	GCA_001872865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/865/GCA_001872865.1_ASM187286v1	27112493	-
Comamonadaceae bacterium CG2_30_60_41	1805091	PRJNA297582	297582	Proteobacteria	Betaproteobacteria	2.38119	60.1	-	MNXY01	221	2443	2168	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328308	GCA_001872855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/855/GCA_001872855.1_ASM187285v1	27112493	-
archaeon CG2_30_31_98	1805398	PRJNA297582	297582	unclassified Archaea	unclassified Archaea (miscellaneous)	0.416944	31.2	-	MNXZ01	26	429	367	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328247	GCA_001872885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/885/GCA_001872885.1_ASM187288v1	27112493	-
bacterium CG2_30_33_46	1805400	PRJNA297582	297582	unclassified Bacteria	unclassified Bacteria (miscellaneous)	0.880072	33.1	-	MNYB01	50	1001	907	11/9/16	11/9/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04328249	GCA_001872935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/935/GCA_001872935.1_ASM187293v1	27112493	-
Dehalococcoidia bacterium CG2_30_46_19	1805102	PRJNA297582	297582	Terrabacteria group	Chloroflexi	1.22778	45.8	-	MNYD01	160	1320	1162	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328295	GCA_001872925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/925/GCA_001872925.1_ASM187292v1	27112493	-
bacterium CG2_30_37_16	1805401	PRJNA297582	297582	unclassified Bacteria	unclassified Bacteria (miscellaneous)	0.895686	37.2	-	MNYC01	61	942	885	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328267	GCA_001872945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/945/GCA_001872945.1_ASM187294v1	27112493	-
bacterium CG2_30_54_10	1805403	PRJNA297582	297582	unclassified Bacteria	unclassified Bacteria (miscellaneous)	2.82544	53.5	-	MNYA01	511	2401	2057	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328278	GCA_001872985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/985/GCA_001872985.1_ASM187298v1	27112493	-
Dehalococcoidia bacterium CG2_30_46_9	1805103	PRJNA297582	297582	Terrabacteria group	Chloroflexi	1.0756	45.5	-	MNYE01	138	1232	1079	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328256	GCA_001873005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/005/GCA_001873005.1_ASM187300v1	27112493	-
Bacteroidetes bacterium CG2_30_32_10	1805032	PRJNA297582	297582	FCB group	Bacteroidetes/Chlorobi group	2.11098	31.5	-	MNXO01	182	1841	1707	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328253	GCA_001872995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/995/GCA_001872995.1_ASM187299v1	27112493	-
Candidatus Omnitrophica bacterium CG1_02_49_10	1805289	PRJNA297582	297582	PVC group	Candidatus Omnitrophica	0.903907	49.2	-	MNVT01	143	961	813	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328231	GCA_001873045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/045/GCA_001873045.1_ASM187304v1	27112493	-
Flavobacteriaceae bacterium CG2_30_31_66	1805159	PRJNA297582	297582	FCB group	Bacteroidetes/Chlorobi group	2.98898	31.4	-	MNYM01	50	2718	2615	11/9/16	11/9/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04328302	GCA_001873065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/065/GCA_001873065.1_ASM187306v1	27112493	-
Fibrobacteres bacterium CG2_30_45_31	1805149	PRJNA297582	297582	FCB group	Fibrobacteres	2.09097	44.8	-	MNYL01	272	1997	1685	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328287	GCA_001873075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/075/GCA_001873075.1_ASM187307v1	27112493	-
Flavobacteriaceae bacterium CG2_30_34_30	1805160	PRJNA297582	297582	FCB group	Bacteroidetes/Chlorobi group	2.53663	34.4	-	MNYN01	88	2388	2282	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328289	GCA_001873105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/105/GCA_001873105.1_ASM187310v1	27112493	-
Desulfobacterales bacterium CG2_30_60_27	1805129	PRJNA297582	297582	Proteobacteria	delta/epsilon subdivisions	2.51596	60.2	-	MNYK01	157	2302	2187	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328284	GCA_001873115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/115/GCA_001873115.1_ASM187311v1	27112493	-
Helicobacteraceae bacterium CG2_30_36_10	1805215	PRJNA297582	297582	Proteobacteria	delta/epsilon subdivisions	1.99213	36	-	MNYP01	167	2076	1892	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328310	GCA_001873135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/135/GCA_001873135.1_ASM187313v1	27112493	-
Candidatus Gracilibacteria bacterium CG2_30_37_12	1805211	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.946456	37.3	-	MNYO01	134	904	780	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328266	GCA_001873165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/165/GCA_001873165.1_ASM187316v1	27112493	-
Ignavibacteria bacterium CG2_30_36_16	1805221	PRJNA297582	297582	FCB group	Bacteroidetes/Chlorobi group	3.5833	36.5	-	MNYQ01	243	3056	2810	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328290	GCA_001873185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/185/GCA_001873185.1_ASM187318v1	27112493	-
Candidatus Kuenenbacteria bacterium CG2_30_39_24	1805236	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.585778	39.2	-	MNYR01	49	605	545	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328269	GCA_001873195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/195/GCA_001873195.1_ASM187319v1	27112493	-
Candidatus Levybacteria bacterium CG2_30_37_29	1805237	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	1.00414	36.1	-	MNYS01	10	1074	1016	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328268	GCA_001873215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/215/GCA_001873215.1_ASM187321v1	27112493	-
Candidatus Moranbacteria bacterium CG2_30_45_14	1805255	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.752568	44.6	-	MNYT01	50	751	683	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328275	GCA_001873245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/245/GCA_001873245.1_ASM187324v1	27112493	-
Nitrospirae bacterium CG2_30_41_42	1805277	PRJNA297582	297582	Nitrospirae	unclassified Nitrospirae	1.50237	40.6	-	MNYU01	69	1593	1500	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328294	GCA_001873265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/265/GCA_001873265.1_ASM187326v1	27112493	-
Nitrospirae bacterium CG2_30_53_67	1805278	PRJNA297582	297582	Nitrospirae	unclassified Nitrospirae	2.366	53.1	-	MNYV01	183	2264	2109	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328285	GCA_001873285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/285/GCA_001873285.1_ASM187328v1	27112493	-
Candidatus Nomurabacteria bacterium CG2_30_43_9	1805283	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.622542	43.2	-	MNYX01	79	670	579	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328271	GCA_001873305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/305/GCA_001873305.1_ASM187330v1	27112493	-
Nitrospirae bacterium CG2_30_70_394	1805279	PRJNA297582	297582	Nitrospirae	unclassified Nitrospirae	2.64624	70.3	-	MNYW01	182	2301	2137	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328286	GCA_001873295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/295/GCA_001873295.1_ASM187329v1	27112493	-
Candidatus Atribacteria bacterium CG2_30_33_13	1805029	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	1.59403	33.4	-	MNYY01	152	1562	1411	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328298	GCA_001873345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/345/GCA_001873345.1_ASM187334v1	27112493	-
Oscillatoriales cyanobacterium CG2_30_40_61	1805291	PRJNA297582	297582	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.81883	39.8	-	MNYZ01	119	4215	4018	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328299	GCA_001873365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/365/GCA_001873365.1_ASM187336v1	27112493	-
Oscillatoriales cyanobacterium CG2_30_44_21	1805292	PRJNA297582	297582	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.49529	44.3	-	MNZA01	272	3240	3046	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328304	GCA_001873375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/375/GCA_001873375.1_ASM187337v1	27112493	-
Parcubacteria group bacterium CG2_30_36_18	1805314	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.526254	35.7	-	MNZC01	68	626	527	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328262	GCA_001873405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/405/GCA_001873405.1_ASM187340v1	27112493	-
Candidatus Pacebacteria bacterium CG2_30_36_39	1805300	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.976464	35.7	-	MNZB01	4	1039	984	11/9/16	11/9/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04328264	GCA_001873435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/435/GCA_001873435.1_ASM187343v1	27112493	-
Parcubacteria group bacterium CG2_30_36_21	1805315	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.373873	36.2	-	MNZD01	35	397	346	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328263	GCA_001873425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/425/GCA_001873425.1_ASM187342v1	27112493	-
Parcubacteria group bacterium CG2_30_36_38	1805316	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.463448	36.3	-	MNZE01	38	525	454	11/9/16	11/9/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04328265	GCA_001873465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/465/GCA_001873465.1_ASM187346v1	27112493	-
Parcubacteria group bacterium CG2_30_44_11	1805317	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.651172	44.1	-	MNZF01	58	680	606	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328272	GCA_001873485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/485/GCA_001873485.1_ASM187348v1	27112493	-
Parcubacteria group bacterium CG2_30_44_18	1805318	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.713871	44.4	-	MNZG01	73	777	692	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328273	GCA_001873495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/495/GCA_001873495.1_ASM187349v1	27112493	-
Parcubacteria group bacterium CG2_30_45_37	1805319	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.619304	45.1	-	MNZH01	86	687	572	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328276	GCA_001873515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/515/GCA_001873515.1_ASM187351v1	27112493	-
Parcubacteria group bacterium CG2_30_48_51	1805320	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.895012	48.4	-	MNZI01	36	911	818	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328277	GCA_001873525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/525/GCA_001873525.1_ASM187352v1	27112493	-
Candidatus Peregrinibacteria bacterium CG2_30_44_17	1805324	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	1.17005	43.8	-	MNZJ01	51	1103	1023	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328301	GCA_001873565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/565/GCA_001873565.1_ASM187356v1	27112493	-
Rhodobacterales bacterium CG2_30_65_12	1805338	PRJNA297582	297582	Proteobacteria	Alphaproteobacteria	1.94043	64.8	-	MNZL01	178	1993	1787	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328293	GCA_001873585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/585/GCA_001873585.1_ASM187358v1	27112493	-
Candidatus Roizmanbacteria bacterium CG2_30_33_16	1805340	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.919287	33.3	-	MNZM01	122	1032	894	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328260	GCA_001873595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/595/GCA_001873595.1_ASM187359v1	27112493	-
Candidatus Saccharibacteria bacterium CG2_30_41_52	1805375	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.825475	40.5	-	MNZN01	12	840	781	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328313	GCA_001873625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/625/GCA_001873625.1_ASM187362v1	27112493	-
Porphyromonadaceae bacterium CG2_30_38_12	1805325	PRJNA297582	297582	FCB group	Bacteroidetes/Chlorobi group	2.63395	38.3	-	MNZK01	118	2178	2052	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328300	GCA_001873635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/635/GCA_001873635.1_ASM187363v1	27112493	-
Candidatus Shapirobacteria bacterium CG2_30_35_20	1805376	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.567953	35.4	-	MNZO01	52	727	658	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328261	GCA_001873665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/665/GCA_001873665.1_ASM187366v1	27112493	-
Syntrophaceae bacterium CG2_30_49_12	1805377	PRJNA297582	297582	Proteobacteria	delta/epsilon subdivisions	2.0303	48.4	-	MNZP01	223	2052	1850	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328280	GCA_001873675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/675/GCA_001873675.1_ASM187367v1	27112493	-
Syntrophobacteraceae bacterium CG2_30_61_12	1805379	PRJNA297582	297582	Proteobacteria	delta/epsilon subdivisions	3.67125	60.7	-	MNZR01	378	3314	2968	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328311	GCA_001873705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/705/GCA_001873705.1_ASM187370v1	27112493	-
Candidatus Wirthbacteria bacterium CG2_30_54_11	1817892	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	1.4439	54.1	-	MNZT01	128	1364	1218	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328296	GCA_001873755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/755/GCA_001873755.1_ASM187375v1	27112493	-
Syntrophaceae bacterium CG2_30_58_14	1805378	PRJNA297582	297582	Proteobacteria	delta/epsilon subdivisions	3.03966	57.7	-	MNZQ01	204	2917	2685	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328282	GCA_001873745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/745/GCA_001873745.1_ASM187374v1	27112493	-
bacterium CG2_30_40_12	1805402	PRJNA297582	297582	unclassified Bacteria	unclassified Bacteria (miscellaneous)	0.567895	39.5	-	MNZU01	37	599	526	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328250	GCA_001873785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/785/GCA_001873785.1_ASM187378v1	27112493	-
Zetaproteobacteria bacterium CG2_30_46_52	1805429	PRJNA297582	297582	Proteobacteria	Zetaproteobacteria	2.31016	46.4	-	MNZV01	26	2268	2190	11/9/16	11/9/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04328291	GCA_001873795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/795/GCA_001873795.1_ASM187379v1	27112493	-
Zetaproteobacteria bacterium CG2_30_59_37	1805430	PRJNA297582	297582	Proteobacteria	Zetaproteobacteria	2.35075	58.8	-	MNZW01	36	2344	2247	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328292	GCA_001873825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/825/GCA_001873825.1_ASM187382v1	27112493	-
Candidatus Altiarchaeum sp. CG2_30_32_3053	1803514	PRJNA297582	297582	Euryarchaeota	unclassified Euryarchaeota	1.66097	32.2	-	MNZY01	258	1504	1353	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328315	GCA_001873845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/845/GCA_001873845.1_ASM187384v1	27112493	-
Candidatus Moranbacteria bacterium CG2_30_41_165	1805254	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	0.896114	41	-	MNZX01	44	917	828	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328314	GCA_001873875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/875/GCA_001873875.1_ASM187387v1	27112493	-
Rhodobacteraceae bacterium CG2_30_10_405	1805337	PRJNA297582	297582	Proteobacteria	Alphaproteobacteria	2.0454	66.1	-	MNZZ01	790	2297	1689	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328316	GCA_001873855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/855/GCA_001873855.1_ASM187385v1	27112493	-
Deltaproteobacteria bacterium CG2_30_43_15	1805125	PRJNA297582	297582	Proteobacteria	delta/epsilon subdivisions	2.57435	43	-	MNYF01	264	2647	2421	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328279	GCA_001873905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/905/GCA_001873905.1_ASM187390v1	27112493	-
Deltaproteobacteria bacterium CG2_30_66_27	1805127	PRJNA297582	297582	Proteobacteria	delta/epsilon subdivisions	2.62631	65.5	-	MNYH01	100	2585	2452	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328283	GCA_001873935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/935/GCA_001873935.1_ASM187393v1	27112493	-
Deltaproteobacteria bacterium CG2_30_63_29	1805126	PRJNA297582	297582	Proteobacteria	delta/epsilon subdivisions	7.87866	63.1	-	MNYG01	528	5851	5428	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328303	GCA_001873925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/925/GCA_001873925.1_ASM187392v1	27112493	-
Candidatus Desantisbacteria bacterium CG2_30_40_21	1817895	PRJNA297582	297582	unclassified Bacteria	Bacteria candidate phyla	2.14842	40.2	-	MNYI01	249	1928	1805	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328251	GCA_001873945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/945/GCA_001873945.1_ASM187394v1	27112493	-
Candidatus Aenigmarchaeota archaeon CG1_02_38_14	1803500	PRJNA297582	297582	DPANN group	Candidatus Aenigmarchaeota	0.878809	37.5	-	MNUF01	72	1114	1011	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328206	GCA_001873985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/985/GCA_001873985.1_ASM187398v1	27112493	-
Candidatus Omnitrophica bacterium CG1_02_44_16	1805287	PRJNA297582	297582	PVC group	Candidatus Omnitrophica	1.55975	44.1	-	MNVR01	39	1592	1510	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328230	GCA_001873995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/995/GCA_001873995.1_ASM187399v1	27112493	-
Desulfobacteraceae bacterium CG2_30_51_40	1805128	PRJNA297582	297582	Proteobacteria	delta/epsilon subdivisions	3.43977	50.7	-	MNYJ01	229	3170	2980	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328281	GCA_001874005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/005/GCA_001874005.1_ASM187400v1	27112493	-
Candidatus Omnitrophica bacterium CG1_02_46_14	1805288	PRJNA297582	297582	PVC group	Candidatus Omnitrophica	1.19141	46	-	MNVS01	149	1253	1106	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328228	GCA_001874025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/025/GCA_001874025.1_ASM187402v1	27112493	-
Alphaproteobacteria bacterium MedPE-SWcel	1860092	PRJNA318731	318731	Proteobacteria	Alphaproteobacteria	4.07644	61.7	-	MPDC01	54	3721	3626	11/10/16	11/10/16	Contig	University Miguel Hernandez	SAMN05219281	GCA_001874255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/255/GCA_001874255.1_ASM187425v1	27446036	-
Bacteroidetes bacterium MedPE-SWsnd-G1	1860094	PRJNA318731	318731	FCB group	Bacteroidetes/Chlorobi group	2.70213	33.5	-	MPDD01	60	2446	2399	11/10/16	11/10/16	Contig	University Miguel Hernandez	SAMN05219313	GCA_001874265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/265/GCA_001874265.1_ASM187426v1	27446036	-
Bacteroidetes bacterium MedPE-SWsnd-G2	1860095	PRJNA318731	318731	FCB group	Bacteroidetes/Chlorobi group	3.03508	34	-	MPDE01	19	2723	2676	11/10/16	11/10/16	Contig	University Miguel Hernandez	SAMN05219315	GCA_001874335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/335/GCA_001874335.1_ASM187433v1	27446036	-
Gammaproteobacteria bacterium MedPE	1860093	PRJNA318731	318731	Proteobacteria	Gammaproteobacteria	3.25326	40.9	-	MPDF01	180	2970	2916	11/10/16	11/10/16	Contig	University Miguel Hernandez	SAMN05219439	GCA_001874365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/365/GCA_001874365.1_ASM187436v1	27446036	-
Desulfovibrio dechloracetivorans	117209	PRJNA295130	295130	Proteobacteria	delta/epsilon subdivisions	4.08158	63.8	-	LKAQ01	5	3718	3641	11/10/16	4/17/17	Scaffold	Universite de Pau et des Pays de l'Adour	SAMN04041570	GCA_001874525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/525/GCA_001874525.1_ASM187452v1	-	BerOc1
candidate division Hyd24-12 bacterium JCC-6	1902299	PRJNA305678	305678	unclassified Bacteria	Bacteria candidate phyla	2.92196	56.6	-	MJAN01	95	-	-	11/10/16	11/10/16	Contig	Bielefeld University	SAMN05513440	GCA_001875255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/255/GCA_001875255.1_ASM187525v1	-	-
Marine Group III euryarchaeote CG-Epi1	1888995	PRJNA335308	335308	Euryarchaeota	unclassified Euryarchaeota	1.17717	36.6	-	MIZA01	25	1122	1061	11/10/16	11/10/16	Contig	"Universidad Miguel Hernandez, Evolutionary Genomics Group"	SAMN05509049	GCA_001875345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/345/GCA_001875345.1_ASM187534v1	-	-
Marine Group III euryarchaeote CG-Epi3	1888997	PRJNA335308	335308	Euryarchaeota	unclassified Euryarchaeota	0.790833	35.9	-	MIYY01	30	749	696	11/10/16	11/10/16	Contig	"Universidad Miguel Hernandez, Evolutionary Genomics Group"	SAMN05509051	GCA_001875355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/355/GCA_001875355.1_ASM187535v1	-	-
Marine Group III euryarchaeote CG-Epi4	1888998	PRJNA335308	335308	Euryarchaeota	unclassified Euryarchaeota	0.707662	36.4	-	MIYX01	24	677	636	11/10/16	11/10/16	Contig	"Universidad Miguel Hernandez, Evolutionary Genomics Group"	SAMN05509052	GCA_001875365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/365/GCA_001875365.1_ASM187536v1	-	-
Marine Group III euryarchaeote CG-Epi6	1889000	PRJNA335308	335308	Euryarchaeota	unclassified Euryarchaeota	0.535051	36.3	-	MIYV01	26	544	501	11/10/16	11/10/16	Contig	"Universidad Miguel Hernandez, Evolutionary Genomics Group"	SAMN05509054	GCA_001875375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/375/GCA_001875375.1_ASM187537v1	-	-
Marine Group III euryarchaeote CG-Bathy1	1889001	PRJNA335308	335308	Euryarchaeota	unclassified Euryarchaeota	1.04293	37.5	-	MIYU01	22	1008	950	11/10/16	11/10/16	Contig	"Universidad Miguel Hernandez, Evolutionary Genomics Group"	SAMN05509055	GCA_001875425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/425/GCA_001875425.1_ASM187542v1	-	-
Marine Group III euryarchaeote CG-Epi5	1888999	PRJNA335308	335308	Euryarchaeota	unclassified Euryarchaeota	0.389093	36.3	-	MIYW01	22	362	330	11/10/16	11/10/16	Contig	"Universidad Miguel Hernandez, Evolutionary Genomics Group"	SAMN05509053	GCA_001875455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/455/GCA_001875455.1_ASM187545v1	-	-
Marine Group III euryarchaeote CG-Bathy2	1889002	PRJNA335308	335308	Euryarchaeota	unclassified Euryarchaeota	0.773757	64.4	-	MIYT01	18	721	680	11/10/16	11/10/16	Contig	"Universidad Miguel Hernandez, Evolutionary Genomics Group"	SAMN05509056	GCA_001875445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/445/GCA_001875445.1_ASM187544v1	-	-
Marine Group III euryarchaeote CG-Epi2	1888996	PRJNA335308	335308	Euryarchaeota	unclassified Euryarchaeota	1.22423	36.1	-	MIYZ01	43	1190	1115	11/10/16	11/10/16	Contig	"Universidad Miguel Hernandez, Evolutionary Genomics Group"	SAMN05509050	GCA_001875465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/465/GCA_001875465.1_ASM187546v1	-	-
Bathymodiolus thermophilus thioautotrophic gill symbiont	2360	PRJNA339702	339702	Proteobacteria	Gammaproteobacteria	3.08841	37.8	-	MIQH01	1281	2424	2159	11/10/16	4/17/17	Scaffold	University of Greifswald	SAMN05603587	GCA_001875585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/585/GCA_001875585.1_BATSymA	-	BAT/CrabSpa'14
Cellvibrionales bacterium GSC11	1898960	PRJNA258478	258478	Proteobacteria	Gammaproteobacteria	0.997997	48.7	-	MJBO01	283	-	-	11/10/16	11/10/16	Scaffold	University of Chicago	SAMN05751690	GCA_001875605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/605/GCA_001875605.1_ASM187560v1	-	-
Lelliottia nimipressuralis	69220	PRJNA343413	343413	Proteobacteria	Gammaproteobacteria	4.98103	56	-	MKER01	18	4928	4605	11/10/16	4/17/17	Contig	Zhejiang Sci-Tech University	SAMN05787348	GCA_001875645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/645/GCA_001875645.1_ASM187564v1	-	CIP 104980
Sulfurimonas hongkongensis	1172190	PRJNA210729	210729	Proteobacteria	delta/epsilon subdivisions	2.30202	34.9	-	AUPZ01	28	2257	2195	8/13/13	4/8/17	Contig	The University of Hong Kong	SAMN02471177	GCA_000445475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/475/GCA_000445475.1_Version_1_of_the_Sulfurimonas_hongkongensis_AST-10_genome	-	AST-10
Paenibacillus antibioticophila	1274374	PRJEB1771	207043	Terrabacteria group	Firmicutes	5.58469	49.1	-	CBLK01	9	5101	4833	6/4/13	4/28/17	Scaffold	URMITE	SAMEA2272085	GCA_000455265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/265/GCA_000455265.1_Pa_GD11	-	GD11
Gemmata massiliana	1210884	PRJEB621	179332	PVC group	Planctomycetes	9.26919	64	-	CBXA01	22	-	-	1/20/14	1/30/15	Scaffold	URMITE	SAMEA3138899	GCA_000531095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/095/GCA_000531095.1_IIL30	-	IIL30
Sphingobacterium deserti	1229276	PRJNA243393	243393	FCB group	Bacteroidetes/Chlorobi group	4.59588	42.6	-	JJMU01	75	3899	3803	9/24/14	4/9/17	Contig	"BIOTECHNOLOGY RESEARCH INSTITUTE, CAAS"	SAMN02722725	GCA_000757725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/725/GCA_000757725.1_ASM75772v1	25830331	ACCC 05744
[Collinsella] massiliensis	1232426	PRJEB541	177105	Terrabacteria group	Actinobacteria	2.33079	65.8	-	CAPI01	135	2071	1944	12/17/12	8/15/17	Contig	URMITE	SAMEA2272214	GCA_000333815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/815/GCA_000333815.1_ASM33381v1	-	GD3
Geodermatophilus taihuensis	1225127	PRJEB17201	351408	Terrabacteria group	Actinobacteria	4.31691	74.9	-	FOMD01	10	4242	4119	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05661030	GCA_900112525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/525/GCA_900112525.1_IMG-taxon_2599185298_annotated_assembly	-	DSM 45962
Salibacterium halotolerans	1884432	PRJEB17326	351505	Terrabacteria group	Firmicutes	3.61406	47.7	-	FOXD01	54	3681	3563	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05518683	GCA_900115625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/625/GCA_900115625.1_IMG-taxon_2675903022_annotated_assembly	-	S7
Dokdonella immobilis	578942	PRJEB17133	351315	Proteobacteria	Gammaproteobacteria	4.63584	65	-	FOVF01	78	3918	3779	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216289	GCA_900115085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/085/GCA_900115085.1_IMG-taxon_2667527410_annotated_assembly	-	CGMCC 1.7659
Kosakonia sp. S29	1855371	PRJEB17238	351432	Proteobacteria	Gammaproteobacteria	5.28433	52.6	-	FONB01	41	5127	4903	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216563	GCA_900112785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/785/GCA_900112785.1_IMG-taxon_2651870173_annotated_assembly	-	S29
Celeribacter neptunius	588602	PRJEB17383	351587	Proteobacteria	Alphaproteobacteria	4.39858	61.7	-	FORH01	18	4262	4168	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487991	GCA_900113955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/955/GCA_900113955.1_IMG-taxon_2617270870_annotated_assembly	-	DSM 26471
Sunxiuqinia elliptica	655355	PRJEB17263	351488	FCB group	Bacteroidetes/Chlorobi group	5.09432	41.7	-	FONW01	26	4106	4025	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216283	GCA_900113005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/005/GCA_900113005.1_IMG-taxon_2663762719_annotated_assembly	-	CGMCC 1.9156
Pseudarcicella hirudinis	1079859	PRJEB17353	351558	FCB group	Bacteroidetes/Chlorobi group	6.16805	38.4	-	FOXH01	36	4997	4896	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04515674	GCA_900115665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/665/GCA_900115665.1_IMG-taxon_2634166314_annotated_assembly	-	"E92,LMG 26720,CCM 7988"
Tranquillimonas alkanivorans	441119	PRJEB17313	351517	Proteobacteria	Alphaproteobacteria	4.54302	67.3	-	FOXA01	92	4458	4252	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488047	GCA_900115595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/595/GCA_900115595.1_IMG-taxon_2622736594_annotated_assembly	-	DSM 19547
Desemzia incerta	82801	PRJEB17295	351455	Terrabacteria group	Firmicutes	2.33079	38	-	FOXW01	19	2237	2145	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488506	GCA_900115825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/825/GCA_900115825.1_IMG-taxon_2622736579_annotated_assembly	-	DSM 20581
Methylocapsa palsarum	1612308	PRJEB17422	351648	Proteobacteria	Alphaproteobacteria	4.1053	61.7	-	FOSN01	78	3858	3637	10/30/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444581	GCA_900114285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/285/GCA_900114285.1_IMG-taxon_2675903028_annotated_assembly	-	NE2
Roseivivax halotolerans	93684	PRJEB17248	351422	Proteobacteria	Alphaproteobacteria	3.77113	64.1	-	FOXV01	45	3722	3617	10/31/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421853	GCA_900115815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/815/GCA_900115815.1_IMG-taxon_2675903164_annotated_assembly	-	JCM 10271
Nocardioides psychrotolerans	1005945	PRJEB17354	351557	Terrabacteria group	Actinobacteria	4.51825	70.6	-	FOQG01	43	4418	4227	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216561	GCA_900113685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/685/GCA_900113685.1_IMG-taxon_2663762759_annotated_assembly	-	CGMCC 1.11156
Streptomyces aidingensis	910347	PRJEB17169	351360	Terrabacteria group	Actinobacteria	6.48275	73.1	-	FOLM01	43	5657	5319	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421773	GCA_900112355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/355/GCA_900112355.1_IMG-taxon_2675903061_annotated_assembly	-	CGMCC 4.5739
Sulfitobacter brevis	74348	PRJEB17229	351441	Proteobacteria	Alphaproteobacteria	4.23621	58.4	-	FOMW01	68	4140	3915	10/30/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488523	GCA_900112755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/755/GCA_900112755.1_IMG-taxon_2619619004_annotated_assembly	-	DSM 11443
Izhakiella capsodis	1367852	PRJEB17126	351322	Proteobacteria	Gammaproteobacteria	3.50827	50.1	-	FOVC01	30	3281	3048	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216516	GCA_900115045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/045/GCA_900115045.1_IMG-taxon_2651870110_annotated_assembly	-	N6PO6
Erythrobacter nanhaisediminis	604088	PRJEB17311	351519	Proteobacteria	Alphaproteobacteria	2.89944	62	-	FOWZ01	12	2872	2788	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488060	GCA_900115585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/585/GCA_900115585.1_IMG-taxon_2619618819_annotated_assembly	-	CGMCC 1.7715
Porphyromonadaceae bacterium KH3CP3RA	1855396	PRJEB17430	351641	FCB group	Bacteroidetes/Chlorobi group	4.92925	43.1	-	FOSU01	47	3955	3789	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216357	GCA_900114365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/365/GCA_900114365.1_IMG-taxon_2651870357_annotated_assembly	-	KH3CP3RA
Halolactibacillus alkaliphilus	442899	PRJEB17249	351421	Terrabacteria group	Firmicutes	2.87147	38	-	FOWN01	65	2714	2540	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05720591	GCA_900115465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/465/GCA_900115465.1_IMG-taxon_2617270909_annotated_assembly	-	CGMCC 1.6843
Donghicola eburneus	393278	PRJEB17141	351389	Proteobacteria	Alphaproteobacteria	4.42647	58.8	-	FOXY01	59	4304	4147	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421764	GCA_900115865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/865/GCA_900115865.1_IMG-taxon_2684622851_annotated_assembly	-	DSM 29127
Methylobacterium pseudosasicola	582667	PRJEB17455	351616	Proteobacteria	Alphaproteobacteria	6.84528	68.4	-	FOTK01	129	6693	6317	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192568	GCA_900114535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/535/GCA_900114535.1_IMG-taxon_2654588108_annotated_assembly	-	BL36
Acetitomaculum ruminis DSM 5522	1120918	PRJEB17106	351342	Terrabacteria group	Firmicutes	3.08272	34.2	-	FOJY01	54	2678	2537	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216249	GCA_900112085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/085/GCA_900112085.1_IMG-taxon_2651870361_annotated_assembly	-	DSM 5522
Actinoplanes philippinensis	35752	PRJEB17266	351485	Terrabacteria group	Actinobacteria	10.3812	71.4	-	FONV01	59	9389	9026	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421541	GCA_900113015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/015/GCA_900113015.1_IMG-taxon_2675903218_annotated_assembly	-	DSM 43019
Paenibacillus catalpae	1045775	PRJEB17224	351446	Terrabacteria group	Firmicutes	6.62005	49.5	-	FOMT01	14	5920	5754	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216378	GCA_900112695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/695/GCA_900112695.1_IMG-taxon_2675903006_annotated_assembly	-	CGMCC 1.10784
Halopelagius inordinatus	553467	PRJEB17299	351451	Euryarchaeota	Halobacteria	3.52931	65	-	FOOQ01	14	3604	3497	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488063	GCA_900113245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/245/GCA_900113245.1_IMG-taxon_2617270917_annotated_assembly	-	CGMCC 1.7739
Marinospirillum celere	1122252	PRJEB17167	351362	Proteobacteria	Gammaproteobacteria	3.08356	50.4	-	FOLH01	12	2910	2829	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660443	GCA_900112235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/235/GCA_900112235.1_IMG-taxon_2600254929_annotated_assembly	-	DSM 18438
Streptomyces pini	1520580	PRJEB17415	351594	Terrabacteria group	Actinobacteria	6.33889	73	-	FOSG01	57	5714	5382	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192584	GCA_900114215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/215/GCA_900114215.1_IMG-taxon_2654587880_annotated_assembly	-	PL19
Cohaesibacter marisflavi	655353	PRJEB17143	351387	Proteobacteria	Alphaproteobacteria	5.33972	53.8	-	FOVR01	41	4835	4698	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488056	GCA_900115225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/225/GCA_900115225.1_IMG-taxon_2617270874_annotated_assembly	-	CGMCC 1.9157
Rugamonas rubra	758825	PRJEB17471	351680	Proteobacteria	Gammaproteobacteria	6.8305	67	-	FOTW01	82	5945	5698	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02982985	GCA_900114705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/705/GCA_900114705.1_IMG-taxon_2597490347_annotated_assembly	-	ATCC 43154
Saccharopolyspora jiangxiensis	418522	PRJEB17205	351404	Terrabacteria group	Actinobacteria	7.77725	70.9	-	FOME01	28	7211	7018	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216506	GCA_900112555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/555/GCA_900112555.1_IMG-taxon_2667527438_annotated_assembly	-	CGMCC 4.3529
Pseudovibrio ascidiaceicola	285279	PRJEB17418	351601	Proteobacteria	Alphaproteobacteria	5.84549	51.2	-	FOSK01	45	5353	5183	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488518	GCA_900114245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/245/GCA_900114245.1_IMG-taxon_2615840717_annotated_assembly	-	DSM 16392
Lactobacillus rogosae	706562	PRJEB17265	351486	Terrabacteria group	Firmicutes	2.8174	36.1	-	FONU01	50	2565	2440	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02982992	GCA_900112995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/995/GCA_900112995.1_IMG-taxon_2597490368_annotated_assembly	-	ATCC 27753
Cryobacterium levicorallinum	995038	PRJEB17341	351570	Terrabacteria group	Actinobacteria	3.75438	64.5	-	FOPW01	39	3499	3290	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216274	GCA_900113585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/585/GCA_900113585.1_IMG-taxon_2663762754_annotated_assembly	-	GMCC 1.11211
Ectothiorhodospira mobilis	195064	PRJEB17493	351658	Proteobacteria	Gammaproteobacteria	2.62495	68.2	-	FOUO01	35	2453	2364	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421721	GCA_900114895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/895/GCA_900114895.1_IMG-taxon_2671180234_annotated_assembly	-	DSM 4180
Parageobacillus thermantarcticus	186116	PRJEB17059	351170	Terrabacteria group	Firmicutes	3.44888	43.7	-	FOJS01	106	3643	3263	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192569	GCA_900111865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/865/GCA_900111865.1_IMG-taxon_2654588109_annotated_assembly	-	M1
Anoxybacillus pushchinoensis	150248	PRJEB17036	351194	Terrabacteria group	Firmicutes	2.62542	42.1	-	FOJQ01	117	2874	2538	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216169	GCA_900111795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/795/GCA_900111795.1_IMG-taxon_2654588147_annotated_assembly	-	K1
Methylophaga sulfidovorans	45496	PRJEB17414	351595	Proteobacteria	Gammaproteobacteria	3.00688	42.8	-	FOSH01	31	2940	2818	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488079	GCA_900114205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/205/GCA_900114205.1_IMG-taxon_2622736507_annotated_assembly	-	DSM 11578
Methylobacterium gossipiicola	582675	PRJEB17331	351500	Proteobacteria	Alphaproteobacteria	4.52466	68.7	-	FOPM01	77	4202	3985	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192565	GCA_900113485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/485/GCA_900113485.1_IMG-taxon_2651870128_annotated_assembly	-	Gh-105
Amycolatopsis rubida	112413	PRJEB17174	351354	Terrabacteria group	Actinobacteria	9.87359	69.8	-	FOWC01	45	9203	8731	10/31/16	8/3/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421854	GCA_900115345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/345/GCA_900115345.1_IMG-taxon_2675903692_annotated_assembly	-	DSM 44637
Lactobacillus bombicola	1505723	PRJEB17220	351450	Terrabacteria group	Firmicutes	1.67591	34.7	-	FOMN01	20	1650	1552	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487792	GCA_900112665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/665/GCA_900112665.1_IMG-taxon_2617270727_annotated_assembly	-	R-53102
Sulfitobacter dubius	218673	PRJEB17325	351506	Proteobacteria	Alphaproteobacteria	3.67154	60.2	-	FOPG01	21	3597	3496	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488039	GCA_900113435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/435/GCA_900113435.1_IMG-taxon_2616644813_annotated_assembly	-	DSM 16472
Psychrobacillus psychrodurans	126157	PRJEB17492	351659	Terrabacteria group	Firmicutes	4.01688	36	-	FOUN01	48	3986	3839	10/30/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421832	GCA_900114885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/885/GCA_900114885.1_IMG-taxon_2675903167_annotated_assembly	-	DSM 11713
Marinobacter pelagius	379482	PRJEB17496	351655	Proteobacteria	Gammaproteobacteria	3.80015	59.4	-	FOUR01	16	3525	3435	10/30/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487961	GCA_900114925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/925/GCA_900114925.1_IMG-taxon_2619618995_annotated_assembly	-	CGMCC 1.6775
Chryseobacterium frigidisoli	1125876	PRJEB17363	351548	FCB group	Bacteroidetes/Chlorobi group	3.02105	33.3	-	FOQT01	11	2847	2769	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443292	GCA_900113805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/805/GCA_900113805.1_IMG-taxon_2684622856_annotated_assembly	-	DSM 26000
Bizionia echini	649333	PRJEB17154	351376	FCB group	Bacteroidetes/Chlorobi group	3.31472	33.7	-	FOVN01	27	3053	2969	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487989	GCA_900115185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/185/GCA_900115185.1_IMG-taxon_2622736504_annotated_assembly	-	DSM 23925
Flavobacterium ummariense	913024	PRJEB17139	351309	FCB group	Bacteroidetes/Chlorobi group	3.49389	34.7	-	FOVI01	76	3418	3280	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421741	GCA_900115115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/115/GCA_900115115.1_IMG-taxon_2675903027_annotated_assembly	-	DS-12
Actinopolymorpha cephalotaxi	504797	PRJEB17283	351465	Terrabacteria group	Actinobacteria	6.82286	70.9	-	FOOI01	40	6132	5880	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421678	GCA_900113145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/145/GCA_900113145.1_IMG-taxon_2675903058_annotated_assembly	-	CPCC 202808
Caldicoprobacter faecalis	937334	PRJEB17439	351632	Terrabacteria group	Firmicutes	2.57915	44.9	-	FOXR01	87	2423	2274	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444406	GCA_900115765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/765/GCA_900115765.1_IMG-taxon_2693429901_annotated_assembly	-	DSM 20678
Psychrobacillus psychrotolerans	126156	PRJEB17185	351302	Terrabacteria group	Firmicutes	3.60767	36.4	-	FOXU01	20	3622	3511	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421670	GCA_900115805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/805/GCA_900115805.1_IMG-taxon_2687453787_annotated_assembly	-	DSM 11706
Algoriphagus aquimarinus	237018	PRJEB17103	351345	FCB group	Bacteroidetes/Chlorobi group	5.11953	40.3	-	FOKK01	40	4365	4235	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04489723	GCA_900112005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/005/GCA_900112005.1_IMG-taxon_2634166319_annotated_assembly	-	DSM 23399
Pseudomonas kunmingensis	1211807	PRJEB17394	351577	Proteobacteria	Gammaproteobacteria	4.65454	62.6	-	FORS01	33	4392	4198	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216194	GCA_900114065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/065/GCA_900114065.1_IMG-taxon_2663763606_annotated_assembly	-	DSM 25974
Pseudomonas sagittaria	1135990	PRJEB17413	351596	Proteobacteria	Gammaproteobacteria	4.60757	66.7	-	FOXM01	44	4253	4073	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216229	GCA_900115715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/715/GCA_900115715.1_IMG-taxon_2663762798_annotated_assembly	-	JCM 18195
Flavobacterium phragmitis	739143	PRJEB17208	351401	FCB group	Bacteroidetes/Chlorobi group	6.04129	34.1	-	FOMH01	25	5053	4915	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216297	GCA_900112575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/575/GCA_900112575.1_IMG-taxon_2667527437_annotated_assembly	-	CGMCC 1.10370
Pseudomonas borbori	289003	PRJEB17301	351528	Proteobacteria	Gammaproteobacteria	5.27047	63	-	FOWX01	96	4820	4536	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216190	GCA_900115555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/555/GCA_900115555.1_IMG-taxon_2671180032_annotated_assembly	-	DSM 17834
Salegentibacter flavus	287099	PRJEB17148	351382	FCB group	Bacteroidetes/Chlorobi group	3.6885	39.8	-	FOVL01	51	3374	3218	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660413	GCA_900115145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/145/GCA_900115145.1_IMG-taxon_2599185209_annotated_assembly	-	DSM 17794
Thiohalospira halophila DSM 15071	1123397	PRJEB17214	351396	Proteobacteria	Gammaproteobacteria	2.6877	69.1	-	FOMJ01	23	2681	2591	10/30/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660831	GCA_900112605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/605/GCA_900112605.1_IMG-taxon_2595698212_annotated_assembly	-	HL3
Desulfotomaculum geothermicum	39060	PRJEB17317	351513	Terrabacteria group	Firmicutes	3.65224	49.9	-	FOYM01	83	3758	3536	11/1/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660706	GCA_900115975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/975/GCA_900115975.1_IMG-taxon_2602042027_annotated_assembly	-	DSM 3669
[Clostridium] populeti	37658	PRJEB17236	351434	Terrabacteria group	Firmicutes	4.22282	36.1	-	FOYZ01	44	3739	3570	11/1/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05661086	GCA_900112775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/775/GCA_900112775.1_IMG-taxon_2599185221_annotated_assembly	-	743A
Halogeometricum rufum	553469	PRJEB17150	351380	Euryarchaeota	Halobacteria	4.18712	67.6	-	FOYT01	7	4159	4039	11/1/16	7/28/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487947	GCA_900112175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/175/GCA_900112175.1_IMG-taxon_2617270920_annotated_assembly	-	CGMCC 1.7736
Maribacter stanieri	440514	PRJEB17166	351363	FCB group	Bacteroidetes/Chlorobi group	4.46074	34.4	-	FOYX01	9	3848	3774	11/1/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488010	GCA_900112245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/245/GCA_900112245.1_IMG-taxon_2622736542_annotated_assembly	-	DSM 19891
Granulicella pectinivorans	474950	PRJEB17465	351687	Acidobacteria	Acidobacteriia	5.27586	61.3	-	FOZL01	3	4302	4194	11/1/16	7/28/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421771	GCA_900114625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/625/GCA_900114625.1_IMG-taxon_2687453730_annotated_assembly	-	DSM 21001
Idiomarina maritima	519453	PRJEB17158	351372	Proteobacteria	Gammaproteobacteria	2.43649	47.4	-	FOYU01	8	2339	2266	11/1/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488070	GCA_900115255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/255/GCA_900115255.1_IMG-taxon_2617270903_annotated_assembly	-	CGMCC 1.7285
Halogeometricum limi	555875	PRJEB17136	351312	Euryarchaeota	Halobacteria	3.61627	65.9	-	FOYS01	8	3611	3501	11/1/16	7/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488124	GCA_900115785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/785/GCA_900115785.1_IMG-taxon_2617270895_annotated_assembly	-	CGMCC 1.8711
Halomicrobium zhouii	767519	PRJEB17444	351627	Euryarchaeota	Halobacteria	4.25033	66.2	-	FOZK01	6	4068	3918	11/1/16	7/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216559	GCA_900114435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/435/GCA_900114435.1_IMG-taxon_2667527389_annotated_assembly	-	CGMCC 1.10457
Loktanella tamlensis	390270	PRJEB17134	351314	Proteobacteria	Alphaproteobacteria	3.19095	56.9	-	FOYP01	7	3239	3162	11/1/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488005	GCA_900115105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/105/GCA_900115105.1_IMG-taxon_2619619642_annotated_assembly	-	DSM 26879
Agrococcus baldri	153730	PRJEB17483	351668	Terrabacteria group	Actinobacteria	2.90448	71.2	-	FOZN01	7	2831	2728	11/1/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487783	GCA_900114805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/805/GCA_900114805.1_IMG-taxon_2623620613_annotated_assembly	-	IAM 15147
Robiginitalea myxolifaciens	400055	PRJEB17123	351325	FCB group	Bacteroidetes/Chlorobi group	3.20696	48.9	-	FOYQ01	3	2852	2799	11/1/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04490243	GCA_900115205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/205/GCA_900115205.1_IMG-taxon_2636416043_annotated_assembly	-	DSM 21019
Loktanella litorea	1123755	PRJEB17470	351681	Proteobacteria	Alphaproteobacteria	3.32347	57.5	-	FOZM01	8	3305	3245	11/1/16	8/3/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444714	GCA_900114675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/675/GCA_900114675.1_IMG-taxon_2687453745_annotated_assembly	-	DSM 29433
Marinobacter gudaonensis	375760	PRJEB17152	351378	Proteobacteria	Gammaproteobacteria	3.83902	59.9	-	FOYV01	9	3489	3408	11/1/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488073	GCA_900115175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/175/GCA_900115175.1_IMG-taxon_2617270919_annotated_assembly	-	CGMCC 1.6294
Litoreibacter janthinus	670154	PRJEB17108	351340	Proteobacteria	Alphaproteobacteria	3.75476	57.5	-	FOYO01	4	3744	3659	11/1/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488002	GCA_900111945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/945/GCA_900111945.1_IMG-taxon_2617270836_annotated_assembly	-	DSM 26921
Marinobacter daqiaonensis	650891	PRJEB17160	351369	Proteobacteria	Gammaproteobacteria	3.93379	60.2	-	FOYW01	8	3569	3483	11/1/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216203	GCA_900115285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/285/GCA_900115285.1_IMG-taxon_2667527383_annotated_assembly	-	CGMCC 1.9167
Poseidonocella sedimentorum	871652	PRJEB17142	351388	Proteobacteria	Alphaproteobacteria	3.55557	66	-	FOYI01	27	3290	3192	11/1/16	8/3/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04515673	GCA_900116005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/005/GCA_900116005.1_IMG-taxon_2634166304_annotated_assembly	-	"KMM 9023,NRIC 0796,JCM 17311,KCTC 23692"
Halorubrum sodomense	35743	PRJEB17094	351700	Euryarchaeota	Halobacteria	3.03055	69	-	FOYN01	9	3011	2901	11/1/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487937	GCA_900111935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/935/GCA_900111935.1_IMG-taxon_2617270732_annotated_assembly	-	RD 26
Lentzea waywayandensis	84724	PRJEB16794	350910	Terrabacteria group	Actinobacteria	10.1534	68.9	-	FOYL01	33	9306	9009	11/1/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488564	GCA_900115955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/955/GCA_900115955.1_IMG-taxon_2634166311_annotated_assembly	-	DSM 44232
Sulfitobacter marinus	394264	PRJEB17539	351993	Proteobacteria	Alphaproteobacteria	3.56742	56.9	-	FPAJ01	12	3481	3393	11/2/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488040	GCA_900116285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/285/GCA_900116285.1_IMG-taxon_2619619641_annotated_assembly	-	DSM 23422
Halostagnicola kamekurae	619731	PRJEB17531	351991	Euryarchaeota	Halobacteria	4.10815	61.5	-	FOZS01	16	4094	3814	11/2/16	8/3/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488556	GCA_900116205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/205/GCA_900116205.1_IMG-taxon_2639762563_annotated_assembly	-	DSM 22427
Streptomyces harbinensis	1176198	PRJEB17551	352022	Terrabacteria group	Actinobacteria	5.80268	73	-	FPAB01	33	5269	5076	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444716	GCA_900116145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/145/GCA_900116145.1_IMG-taxon_2675903139_annotated_assembly	-	CGMCC 4.7047
Bradyrhizobium arachidis	858423	PRJEB17582	351951	Proteobacteria	Alphaproteobacteria	9.7938	63.6	-	FPBQ01	98	9397	8867	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192541	GCA_900116675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/675/GCA_900116675.1_IMG-taxon_2654588141_annotated_assembly	-	LMG 26795
Devosia crocina	429728	PRJEB17569	352004	Proteobacteria	Alphaproteobacteria	3.72457	61.3	-	FPCK01	6	3624	3544	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216456	GCA_900116545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/545/GCA_900116545.1_IMG-taxon_2675903690_annotated_assembly	-	IPL20
Actinopolyspora righensis	995060	PRJEB17555	352018	Terrabacteria group	Actinobacteria	4.92401	67.5	-	FPAT01	23	4441	4239	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487904	GCA_900116555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/555/GCA_900116555.1_IMG-taxon_2616644808_annotated_assembly	-	DSM 45501
Pseudomonas marincola	437900	PRJEB17568	352005	Proteobacteria	Gammaproteobacteria	5.02098	57.1	-	FPBC01	33	4614	4467	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216264	GCA_900116605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/605/GCA_900116605.1_IMG-taxon_2663763603_annotated_assembly	-	JCM 14761
Labilibacter aurantiacus	1849719	PRJNA321640	321640	FCB group	Bacteroidetes/Chlorobi group	5.87976	35.1	-	LYBV02	69	4579	4464	6/9/16	4/18/17	Contig	Shandong University at Weihai	SAMN05001249	GCA_001660705.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/705/GCA_001660705.2_ASM166070v2	-	HQYD1
Candidatus Methylomirabilis oxyfera	671143	PRJNA40193	40193	unclassified Bacteria	Bacteria candidate phyla	2.75285	58.6	chromosome:FP565575.1	-	1	3146	3072	9/16/09	2/27/15	Complete Genome	Genoscope	SAMEA3138294	GCA_000091165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/091/165/GCA_000091165.1_ASM9116v1	-	-
Bacillus dielmoensis	1347369	PRJEB4276	218497	Terrabacteria group	Firmicutes	4.56671	40.9	-	CCAD01	75	4413	4184	3/11/14	4/9/17	Scaffold	URMITE	SAMEA3138970	GCA_000612665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/665/GCA_000612665.1_FF4	-	-
Bacillus ndiopicus	1347368	PRJEB4275	218498	Terrabacteria group	Firmicutes	4.06816	37	-	CCAP01	23	3928	3825	3/18/14	4/9/17	Scaffold	URMITE	SAMEA3138977	GCA_000612805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/805/GCA_000612805.1_FF3	-	-
Nocardioides massiliensis	1325935	PRJEB1962	204992	Terrabacteria group	Actinobacteria	4.00315	71	-	CCXJ01	839	-	-	9/18/14	11/10/16	Contig	URMITE	SAMEA2769925	GCA_900067705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/067/705/GCA_900067705.1_Nocardioides_massiliensis_str._GD13	-	GD13
Ochrobactrum cytisi	407152	PRJNA350542	350542	Proteobacteria	Alphaproteobacteria	5.96536	55.4	-	MOEC01	192	5727	5436	11/14/16	4/17/17	Scaffold	Kazan Institute of Biochemistry and Biophysics RAS	SAMN05941866	GCA_001876955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/955/GCA_001876955.1_ASM187695v1	-	IPA7.2
Desulfomicrobium baculatum DSM 4028	525897	PRJNA29527	29527	Proteobacteria	delta/epsilon subdivisions	3.94266	58.6	chromosome:NC_013173.1/CP001629.1	-	1	3508	3395	8/26/09	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002602	GCA_000023225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/225/GCA_000023225.1_ASM2322v1	21304634	DSM 4028
Arcobacter lekithochrous	1904463	PRJNA315279	315279	Proteobacteria	delta/epsilon subdivisions	3.60785	28.6	-	MKCO01	436	3394	3316	11/14/16	5/31/17	Contig	Universidad de Santiago de Compostela	SAMN04555171	GCA_001878855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/855/GCA_001878855.1_ASM187885v1	-	LFT 1.7
Streptomyces gilvigriseus	1428644	PRJNA343849	343849	Terrabacteria group	Actinobacteria	5.21328	73	-	MLCF01	206	4619	4384	11/15/16	3/14/17	Contig	Monash University Malaysia	SAMN05898137	GCA_001879105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/105/GCA_001879105.1_ASM187910v1	-	MUSC 26
Nioella nitratireducens	1287720	PRJNA349212	349212	Proteobacteria	Alphaproteobacteria	4.01544	63.6	-	MNBW01	84	3919	3808	11/17/16	4/17/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05928563	GCA_001879715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/715/GCA_001879715.1_ASM187971v1	-	SSW136
Pseudomonas syringae CC1557	1357279	PRJNA211401	211401	Proteobacteria	Gammaproteobacteria	5.81165	58.5585	chromosome:NZ_CP007014.1/CP007014.1; plasmid pCC1557:NZ_CP007015.1/CP007015.1	-	2	5327	5000	1/16/14	3/24/17	Complete Genome	University of Arizona	SAMN02471566	GCA_000452705.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/705/GCA_000452705.3_ASM45270v3	-	CC1557
Phaeobacter porticola	1844006	PRJNA327072	327072	Proteobacteria	Alphaproteobacteria	4.20722	58.5508	chromosome:NZ_CP016364.1/CP016364.1; plasmid pP97_a:NZ_CP016365.1/CP016365.1; plasmid pP97_b:NZ_CP016366.1/CP016366.1; plasmid pP97_c:NZ_CP016367.1/CP016367.1; plasmid pP97_d:NZ_CP016368.1/CP016368.1; plasmid pP97_e:NZ_CP016369.1/CP016369.1	-	6	3996	3839	12/2/16	9/26/17	Complete Genome	Leibniz Institute DSMZ	SAMN05300637	GCA_001888185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/185/GCA_001888185.1_ASM188818v1	"2,891,276,928,699,860"	P97
Candidatus Rickettsiella isopodorum	1225476	PRJNA314882	314882	Proteobacteria	Gammaproteobacteria	1.493	37.1	-	LUKY01	33	1321	1257	11/17/16	4/17/17	Contig	SUNY Oswego	SAMN04544940	GCA_001881495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/495/GCA_001881495.1_ASM188149v1	-	RCFS May 2013
Haloterrigena hispanica	392421	PRJEB17032	351198	Euryarchaeota	Halobacteria	3.96348	61	-	FOIC01	92	4012	3758	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488694	GCA_900111485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/485/GCA_900111485.1_IMG-taxon_2642422550_annotated_assembly	-	CDM_6
Halogranum amylolyticum	660520	PRJEB16956	351083	Euryarchaeota	Halobacteria	5.18569	62.9	-	FODV01	61	5160	4805	10/29/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487948	GCA_900110465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/465/GCA_900110465.1_IMG-taxon_2617270928_annotated_assembly	-	CGMCC 1.10121
Rhizobium tibeticum	501024	PRJEB15707	353782	Proteobacteria	Alphaproteobacteria	6.91294	59.7	-	FNXB01	167	6835	6195	11/16/16	4/16/17	Contig	CEBITEC	SAMEA4501419	GCA_900108425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/425/GCA_900108425.1_Tibet	-	-
Lishizhenia tianjinensis	477690	PRJEB17558	352015	FCB group	Bacteroidetes/Chlorobi group	3.56707	37.4	-	FPAS01	13	3143	3078	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216474	GCA_900116425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/425/GCA_900116425.1_IMG-taxon_2667527393_annotated_assembly	-	CGMCC 1.7005
Halomonas korlensis	463301	PRJEB17587	351956	Proteobacteria	Gammaproteobacteria	4.03801	62.5	-	FPBP01	34	3765	3620	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487955	GCA_900116705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/705/GCA_900116705.1_IMG-taxon_2617270784_annotated_assembly	-	CGMCC 1.6981
Porphyromonadaceae bacterium KHP3R9	1855398	PRJEB17589	351958	FCB group	Bacteroidetes/Chlorobi group	3.36828	48.5	-	FPBR01	106	2769	2607	11/2/16	8/3/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216364	GCA_900116745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/745/GCA_900116745.1_IMG-taxon_2654588142_annotated_assembly	-	KHP3R9
Idiomarina donghaiensis	519452	PRJEB17607	351962	Proteobacteria	Gammaproteobacteria	2.57415	48.1	-	FPCF01	17	2517	2418	11/2/16	8/3/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488139	GCA_900116895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/895/GCA_900116895.1_IMG-taxon_2619618818_annotated_assembly	-	CGMCC 1.7284
Lachnospiraceae bacterium XBD2001	1520820	PRJEB17576	351997	Terrabacteria group	Firmicutes	2.48114	46.2	-	FPAN01	17	2284	2207	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910301	GCA_900116395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/395/GCA_900116395.1_IMG-taxon_2595698216_annotated_assembly	-	XBD2001
Brevundimonas viscosa	871741	PRJEB17543	352030	Proteobacteria	Alphaproteobacteria	2.99683	70.4	-	FOZV01	19	3105	2996	11/2/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05192570	GCA_900116065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/065/GCA_900116065.1_IMG-taxon_2671180176_annotated_assembly	-	CGMCC 1.10683
Micrococcus terreus	574650	PRJEB17583	351952	Terrabacteria group	Actinobacteria	3.08752	68.9	-	FPCG01	31	2796	2644	11/2/16	8/3/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487966	GCA_900116905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/905/GCA_900116905.1_IMG-taxon_2617270780_annotated_assembly	-	CGMCC 1.7054
Xenorhabdus koppenhoeferi	351659	PRJEB17597	351946	Proteobacteria	Gammaproteobacteria	3.18213	43.1	-	FPBJ01	91	2841	2587	11/2/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421784	GCA_900116635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/635/GCA_900116635.1_IMG-taxon_2684622845_annotated_assembly	-	DSM 18168
Algoriphagus locisalis	305507	PRJEB17567	352006	FCB group	Bacteroidetes/Chlorobi group	5.42616	41.2	-	FPBF01	17	4679	4575	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04489724	GCA_900116615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/615/GCA_900116615.1_IMG-taxon_2639762564_annotated_assembly	-	DSM 23445
Lutibacter maritimus	593133	PRJEB17547	352026	FCB group	Bacteroidetes/Chlorobi group	3.4847	29.5	-	FOZP01	20	3105	3028	11/2/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488006	GCA_900116115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/115/GCA_900116115.1_IMG-taxon_2622736611_annotated_assembly	-	DSM 24450
Halomonas saccharevitans	416872	PRJEB17565	352008	Proteobacteria	Gammaproteobacteria	3.68129	67	-	FPAQ01	90	3493	3311	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487956	GCA_900116405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/405/GCA_900116405.1_IMG-taxon_2617270933_annotated_assembly	-	CGMCC 1.6493
Hyphomicrobium facile	51670	PRJEB17554	352019	Proteobacteria	Alphaproteobacteria	4.42535	60	-	FPCH01	5	4162	4049	11/2/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488557	GCA_900116175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/175/GCA_900116175.1_IMG-taxon_2636416034_annotated_assembly	-	DSM 1565
Massilia namucuonensis	1035707	PRJEB17581	351950	Proteobacteria	Betaproteobacteria	8.48911	66.7	-	FPBO01	103	7179	6872	11/2/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216552	GCA_900116645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/645/GCA_900116645.1_IMG-taxon_2671180040_annotated_assembly	-	CGMCC 1.11014
Pustulibacterium marinum	1224947	PRJEB17604	351967	FCB group	Bacteroidetes/Chlorobi group	4.2099	35.4	-	FPBK01	32	3738	3640	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216480	GCA_900116665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/665/GCA_900116665.1_IMG-taxon_2663762752_annotated_assembly	-	CGMCC 1.12333
Sphingobacterium wenxiniae	683125	PRJEB17544	352029	FCB group	Bacteroidetes/Chlorobi group	3.8444	40.9	-	FOZZ01	21	3387	3263	11/2/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660206	GCA_900116225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/225/GCA_900116225.1_IMG-taxon_2634166295_annotated_assembly	-	DSM 22789
Kosakonia arachidis	551989	PRJEB17579	351994	Proteobacteria	Gammaproteobacteria	5.1356	52.5	-	FPAU01	23	5020	4734	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192562	GCA_900116535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/535/GCA_900116535.1_IMG-taxon_2651870175_annotated_assembly	-	Ah-143
Saccharopolyspora flava	95161	PRJEB17530	351992	Terrabacteria group	Actinobacteria	6.2913	70.8	-	FOZX01	22	5653	5475	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660874	GCA_900116135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/135/GCA_900116135.1_IMG-taxon_2599185150_annotated_assembly	-	DSM 44771
Geodermatophilus amargosae	1296565	PRJEB17566	352007	Terrabacteria group	Actinobacteria	5.86971	74.2	-	FPBA01	69	5625	5232	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660657	GCA_900116515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/515/GCA_900116515.1_IMG-taxon_2599185195_annotated_assembly	-	DSM 46136
Mucilaginibacter polytrichastri	1302689	PRJNA329582	329582	FCB group	Bacteroidetes/Chlorobi group	5.843	42	-	MPPL01	3	5086	4898	12/21/16	4/16/17	Scaffold	Capital Normal University	SAMN05415089	GCA_001911425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/425/GCA_001911425.1_ASM191142v1	-	RG4-7
Mycetocola miduiensis	995034	PRJEB17151	351379	Terrabacteria group	Actinobacteria	3.30354	65.3	-	FOVM01	15	3200	3060	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216219	GCA_900115155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/155/GCA_900115155.1_IMG-taxon_2667527394_annotated_assembly	-	CGMCC 1.11101
Tindallia magadiensis	69895	PRJEB17347	351564	Terrabacteria group	Firmicutes	3.08381	39.5	-	FOQA01	31	2823	2731	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192551	GCA_900113635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/635/GCA_900113635.1_IMG-taxon_2651870112_annotated_assembly	-	Z-7934
Zunongwangia mangrovi	1334022	PRJEB17135	351313	FCB group	Bacteroidetes/Chlorobi group	4.13168	35.9	-	FOKV01	32	3591	3501	10/30/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487907	GCA_900112105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/105/GCA_900112105.1_IMG-taxon_2622736505_annotated_assembly	-	DSM 24499
Hydrogenimonas thermophila	223786	PRJEB17319	351521	Proteobacteria	delta/epsilon subdivisions	2.44491	33.5	-	FOXB01	92	2519	2389	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216234	GCA_900115615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/615/GCA_900115615.1_IMG-taxon_2654587899_annotated_assembly	-	EP1-55-1
Lentibacillus halodurans	237679	PRJEB17107	351341	Terrabacteria group	Firmicutes	3.67076	41.6	-	FOJW01	31	3597	3398	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488072	GCA_900112045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/045/GCA_900112045.1_IMG-taxon_2617270778_annotated_assembly	-	CGMCC 1.3702
Nocardioides terrae	574651	PRJEB17184	351303	Terrabacteria group	Actinobacteria	3.92183	71.5	-	FOLB01	36	3712	3590	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487968	GCA_900112345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/345/GCA_900112345.1_IMG-taxon_2617270786_annotated_assembly	-	CGMCC 1.7056
Poseidonocella pacifica	871651	PRJEB17085	351705	Proteobacteria	Alphaproteobacteria	3.62201	61.1	-	FOJU01	11	3432	3335	10/30/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421688	GCA_900111875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/875/GCA_900111875.1_IMG-taxon_2687453774_annotated_assembly	-	DSM 29316
Halomonas xianhensis	442341	PRJEB17343	351568	Proteobacteria	Gammaproteobacteria	4.35792	61.3	-	FOPY01	45	4074	3910	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487959	GCA_900113605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/605/GCA_900113605.1_IMG-taxon_2617270878_annotated_assembly	-	CGMCC 1.6848
Pedobacter insulae	414048	PRJEB17335	351496	FCB group	Bacteroidetes/Chlorobi group	4.388	38.2	-	FOPP01	21	3797	3721	10/31/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04489864	GCA_900113525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/525/GCA_900113525.1_IMG-taxon_2634166297_annotated_assembly	-	DSM 18684
Marinilactibacillus piezotolerans	258723	PRJEB19861	378372	Terrabacteria group	Firmicutes	2.29327	39.5	-	FWDP01	4	2180	2086	3/17/17	3/24/17	Contig	URMITE	SAMEA103892151	GCA_900169305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/305/GCA_900169305.1_PRJEB19861	-	Marseille-P2378
Algoriphagus hitonicola	435880	PRJEB17318	351512	FCB group	Bacteroidetes/Chlorobi group	4.32974	42.1	-	FOPC01	34	3856	3759	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487988	GCA_900113375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/375/GCA_900113375.1_IMG-taxon_2622736517_annotated_assembly	-	DSM 19315
Pseudomonas yangmingensis	1720063	PRJEB17485	351666	Proteobacteria	Gammaproteobacteria	3.1415	60.4	-	FOUI01	47	2946	2823	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216217	GCA_900114825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/825/GCA_900114825.1_IMG-taxon_2663762769_annotated_assembly	-	DSM 24213
Siccationidurans arizonensis	1227077	PRJEB17442	351629	FCB group	Bacteroidetes/Chlorobi group	6.01734	59.3	-	FOXS01	20	4992	4873	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04515668	GCA_900115775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/775/GCA_900115775.1_IMG-taxon_2636416085_annotated_assembly	-	"OR362-8,ATCC BAA-1266,JCM 13504"
Geodermatophilus ruber	504800	PRJEB17432	351639	Terrabacteria group	Actinobacteria	4.99214	74	-	FOSW01	33	4691	4512	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488085	GCA_900114385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/385/GCA_900114385.1_IMG-taxon_2622736605_annotated_assembly	-	DSM 45317
Palleronia marisminoris	315423	PRJEB19727	384763	Proteobacteria	Alphaproteobacteria	3.75046	66.3	-	FWFV01	33	3681	3541	4/28/17	5/6/17	Contig	UVEG	SAMEA102066418	GCA_900172315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/315/GCA_900172315.1_P.marisminoris_CECT7066_Spades_Prokka	-	CECT 7066
Halolactibacillus miurensis	306541	PRJEB17535	351987	Terrabacteria group	Firmicutes	3.16861	39.1	-	FPAI01	63	3030	2919	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421668	GCA_900116255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/255/GCA_900116255.1_IMG-taxon_2675903221_annotated_assembly	-	DSM 17074
Porphyromonadaceae bacterium NLAE-zl-C104	1855399	PRJEB17541	352032	FCB group	Bacteroidetes/Chlorobi group	3.91655	43.8	-	FOZR01	85	3122	2944	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216365	GCA_900116075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/075/GCA_900116075.1_IMG-taxon_2654588129_annotated_assembly	-	NLAE-zl-C104
Paraburkholderia aspalathi	1324617	PRJEB17575	351998	Proteobacteria	Betaproteobacteria	9.89229	61.1	-	FPBH01	103	8905	8573	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192563	GCA_900116445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/445/GCA_900116445.1_IMG-taxon_2671180117_annotated_assembly	-	LMG 27731
Crenotalea thermophila	1393122	PRJEB17562	352011	FCB group	Bacteroidetes/Chlorobi group	2.85836	46.2	-	FPCJ01	2	2413	2350	11/2/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660895	GCA_900116565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/565/GCA_900116565.1_IMG-taxon_2600255258_annotated_assembly	-	DSM 14807
Roseovarius azorensis	1287727	PRJEB16852	351029	Proteobacteria	Alphaproteobacteria	3.85711	63.1	-	FOAG01	43	3832	3713	10/29/16	8/3/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443999	GCA_900109455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/455/GCA_900109455.1_IMG-taxon_2693429884_annotated_assembly	-	DSM 100674
Litorimicrobium taeanense	657014	PRJEB16984	351119	Proteobacteria	Alphaproteobacteria	4.01951	60.5	-	FOEP01	37	3874	3756	10/29/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488092	GCA_900110775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/775/GCA_900110775.1_IMG-taxon_2615840713_annotated_assembly	-	DSM 22007
Couchioplanes caeruleus subsp. caeruleus	56427	PRJNA341493	341493	Terrabacteria group	Actinobacteria	8.3608	71.1	-	MEIA01	598	7745	7037	11/20/16	4/17/17	Contig	University College Dublin	SAMN05725319	GCA_001884705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/705/GCA_001884705.1_ASM188470v1	-	DSM 43634
Natronohydrobacter thiooxidans	87172	PRJNA341266	341266	Proteobacteria	Alphaproteobacteria	4.07395	63	-	MJAP01	39	3898	3796	11/20/16	4/17/17	Contig	Institute of Microbiology CAS	SAMN05717314	GCA_001884735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/735/GCA_001884735.1_ASM188473v1	-	AH01
Bacillaceae bacterium G1	1836462	PRJNA317502	317502	Terrabacteria group	Firmicutes	2.36723	56.5	-	LWLU01	635	2390	2154	11/21/16	11/21/16	Contig	Instituto de Quimica	SAMN04867919	GCA_001884825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/825/GCA_001884825.1_ASM188482v1	-	-
Agrobacterium sp. H13-3	861208	PRJNA50341	50341	Proteobacteria	Alphaproteobacteria	5.57377	58.5333	chromosome circular:NC_015183.1/CP002248.1; chromosome linear:NC_015508.1/CP002249.1; plasmid pAspH13-3a:NC_015184.1/CP002250.1	-	3	5365	5154	3/2/11	5/18/17	Complete Genome	CeBiTec Bielefeld University	SAMN02603055	GCA_000192635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/635/GCA_000192635.1_ASM19263v1	21329740	H13-3
Neisseria sp. KEM232	655307	PRJNA394664	394664	Proteobacteria	Betaproteobacteria	2.37191	58.5	chromosome:NZ_CP022527.1/CP022527.1	-	1	2368	2208	7/31/17	8/3/17	Complete Genome	Gwangju Health University	SAMN07357172	GCA_002237445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/445/GCA_002237445.1_ASM223744v1	-	KEM232
Streptomyces cinnamoneus	53446	PRJNA350731	350731	Terrabacteria group	Actinobacteria	11.0065	71.6	-	MOEP01	453	10489	8722	11/25/16	3/15/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN05945585	GCA_001885705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/705/GCA_001885705.1_ASM188570v1	-	ATCC 12686
Enterococcus canintestini	317010	PRJNA270385	270385	Terrabacteria group	Firmicutes	2.68994	36.2	-	JXKG01	61	2519	2429	11/25/16	4/17/17	Contig	Inner Mongolia Agricultural University	SAMN03267163	GCA_001885735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/735/GCA_001885735.1_ASM188573v1	-	DSM 21207
Streptomyces luteus	1915400	PRJNA248928	248928	Terrabacteria group	Actinobacteria	7.82917	71.6	-	JNFQ01	39	7254	6599	8/11/14	3/11/17	Scaffold	Tarim University	SAMN02803977	GCA_000739045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/045/GCA_000739045.1_ASM73904v1	-	TRM 45540
Luteipulveratus halotolerans	1631356	PRJNA278627	278627	Terrabacteria group	Actinobacteria	4.46429	70.1	-	LAIR01	3	4425	4241	8/5/15	4/10/17	Contig	Novartis	SAMN03421050	GCA_001247745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/745/GCA_001247745.1_ASM124774v1	-	C296001
Trichococcus pasteurii	43064	PRJEB17257	351413	Terrabacteria group	Firmicutes	3.19733	46.8	-	FONM01	46	3032	2920	10/30/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488086	GCA_900112935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/935/GCA_900112935.1_IMG-taxon_2619618823_annotated_assembly	-	DSM 2381
Granulibacter bethesdensis	364410	PRJNA347345	347345	Proteobacteria	Alphaproteobacteria	2.69074	58.5	chromosome:NZ_CP018192.1/CP018192.1	-	1	2423	2338	12/6/16	8/31/17	Complete Genome	"Igenbio, Inc"	SAMN05879404	GCA_001889525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/525/GCA_001889525.1_ASM188952v1	-	NIH6.1
Enterococcus aquimarinus	328396	PRJNA270385	270385	Terrabacteria group	Firmicutes	2.51243	38.7	-	JXKD01	46	2366	2282	11/25/16	4/17/17	Contig	Inner Mongolia Agricultural University	SAMN03267160	GCA_001885765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/765/GCA_001885765.1_ASM188576v1	-	DSM 17690
Enterococcus devriesei	319970	PRJNA270385	270385	Terrabacteria group	Firmicutes	3.32065	40.2	-	JXKM01	65	3172	3073	11/25/16	4/17/17	Scaffold	Inner Mongolia Agricultural University	SAMN03267169	GCA_001885905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/905/GCA_001885905.1_ASM188590v1	-	DSM 22802
Enterococcus hermanniensis	249189	PRJNA270385	270385	Terrabacteria group	Firmicutes	2.61353	37.4	-	JXKQ01	47	2582	2466	11/25/16	4/17/17	Scaffold	Inner Mongolia Agricultural University	SAMN03267173	GCA_001885945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/945/GCA_001885945.1_ASM188594v1	-	DSM 17122
Halomonas huangheensis	1178482	PRJNA299864	299864	Proteobacteria	Gammaproteobacteria	4.75749	58.5	chromosome:NZ_CP013106.1/CP013106.1	-	1	4209	4072	11/4/15	4/11/17	Complete Genome	Chinese Academy of Agricultural Sciences	SAMN04216911	GCA_001431725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/725/GCA_001431725.1_ASM143172v1	-	BJGMM-B45
Clostridium jeddahense	1414721	PRJEB4943	233684	Terrabacteria group	Firmicutes	3.6135	51.9	-	CBYL01	104	3520	3372	2/12/14	4/24/17	Contig	URMITE	SAMEA3138927	GCA_000577335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/335/GCA_000577335.1_JCD	-	JCD
Corynebacterium jeddahense	1414719	PRJEB4941	233686	Terrabacteria group	Actinobacteria	2.47213	67.2	-	CBYN01	244	2405	2178	2/12/14	4/24/17	Contig	URMITE	SAMEA3138931	GCA_000577555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/555/GCA_000577555.1_JCB	-	JCB
Clostridium saudiense	1414720	PRJEB4942	233687	Terrabacteria group	Firmicutes	3.65376	27.9	-	CBYM01	100	3421	3262	2/12/14	4/24/17	Contig	URMITE	SAMEA3138939	GCA_000577815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/815/GCA_000577815.1_JCC	-	JCC
Bacillus jeddahensis	1461580	PRJEB5502	239167	Terrabacteria group	Firmicutes	4.76294	39.4	-	CCAS01	149	4667	4456	3/19/14	4/24/17	Contig	URMITE	SAMEA3138968	GCA_000612625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/625/GCA_000612625.1_JCE	26380635	JCE
Virgibacillus massiliensis	1462526	PRJEB5515	244998	Terrabacteria group	Firmicutes	4.35318	36.9	-	CCDP01	7	4334	4181	5/16/14	4/20/17	Contig	URMITE	SAMEA3139037	GCA_000723585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/585/GCA_000723585.1_PRJEB5515_assembly_1	-	Vm-5
Corynebacterium ihumii	1232427	PRJEB646	181975	Terrabacteria group	Actinobacteria	2.25128	64.9	-	CAVS02	5	2157	2025	5/8/13	4/28/17	Scaffold	URMITE	SAMEA2272017	GCA_000403725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/725/GCA_000403725.1_GD7	-	GD7
Candidatus Peribacter riflensis	1735162	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.24803	58.5	chromosome:CP013062.1	-	1	1148	1102	11/3/15	3/15/16	Complete Genome	"Banfield Lab, University of California, Berkeley"	SAMN03842443	GCA_001430755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/430/755/GCA_001430755.1_ASM143075v1	-	-
Kallipyga gabonensis	1686287	PRJEB10239	294151	Terrabacteria group	Firmicutes	1.62121	50	-	CXYV01	2	1527	1442	8/27/15	4/11/17	Contig	URMITE	SAMEA3500893	GCA_001286805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/805/GCA_001286805.1_Kallipyga_gabonensis	-	GM4
Paenibacillus ihumii	687436	PRJEB10947	297017	Terrabacteria group	Firmicutes	5.92411	50.2	-	CYXK01	12	5177	4936	9/26/15	4/16/17	Scaffold	URMITE	SAMEA3556921	GCA_001403875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/403/875/GCA_001403875.1_Paenibacillus_ihumii	-	AT5
Candidatus Peribacter riflensis	1735162	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.24818	58.5	chromosome:CP013063.1	-	1	1150	1103	11/3/15	3/15/16	Complete Genome	"Banfield Lab, University of California, Berkeley"	SAMN03842446	GCA_001430805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/430/805/GCA_001430805.1_ASM143080v1	-	-
Candidatus Peribacter riflensis	1735162	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.24811	58.5	chromosome:CP013064.1	-	1	1149	1102	11/3/15	3/15/16	Complete Genome	"Banfield Lab, University of California, Berkeley"	SAMN03842449	GCA_001430845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/430/845/GCA_001430845.1_ASM143084v1	-	-
Cystobacter ferrugineus	83449	PRJNA353232	353232	Proteobacteria	delta/epsilon subdivisions	12.0518	68.5	-	MPIN01	42	9979	9550	11/29/16	4/17/17	Contig	University of Mississippi	SAMN06011414	GCA_001887355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/355/GCA_001887355.1_ASM188735v1	-	Cbfe23
Oceanobacillus jeddahense	1462527	PRJEB5524	245000	Terrabacteria group	Firmicutes	5.3881	37.2	-	CCDM01	12	5184	4989	5/15/14	4/24/17	Contig	URMITE	SAMEA3139098	GCA_000750635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/635/GCA_000750635.1_PRJEB5524_assembly_1	-	S5
Bacillus andreraoultii	1499685	PRJEB6477	251837	Terrabacteria group	Firmicutes	4.0501	35.4	-	CCFJ01	58	3808	3570	9/5/14	4/10/17	Contig	URMITE	SAMEA2602750	GCA_000752395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/395/GCA_000752395.1_Bacillus_andreraoultii	-	-
Actinomyces polynesiensis	1325934	PRJEB1958	204999	Terrabacteria group	Actinobacteria	2.87845	70.8	-	CCXH01	309	2599	2233	9/18/14	4/10/17	Contig	URMITE	SAMEA2769926	GCA_000820725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/725/GCA_000820725.1_Actinomyces_polynesiensis	-	MS2
Tessaracoccus massiliensis	1522311	PRJEB7539	264165	Terrabacteria group	Actinobacteria	3.21125	67.8	-	CCYJ01	20	3048	2863	10/18/14	4/10/17	Contig	URMITE	SAMEA2821746	GCA_000826065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/065/GCA_000826065.1_Tessaracoccus_massiliensis_SIT6	-	SIT6
Planococcus massiliensis	1499687	PRJEB6479	251849	Terrabacteria group	Firmicutes	3.35702	46	-	CCXS01	1	3378	3271	10/9/14	8/19/15	Contig	URMITE	SAMEA2784220	GCA_000821325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/325/GCA_000821325.2_PRJEB6479_assembly_1	-	ES2
Bacillus testis	1622072	PRJEB9400	284481	Terrabacteria group	Firmicutes	3.98737	42.8	-	CVQX01	9	3890	3656	5/21/15	4/10/17	Scaffold	URMITE	SAMEA3393061	GCA_001243895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/895/GCA_001243895.1_Bacillus_testis	-	SIT10
Peptoniphilus phoceensis	1720298	PRJEB12384	308820	Terrabacteria group	Firmicutes	1.73957	31.2	-	FCEX01	12	1674	1583	1/15/16	4/11/17	Contig	URMITE	SAMEA3725799	GCA_001517665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/665/GCA_001517665.1_Peptoniphilus_phoceensis	-	SIT15
Bariatricus massiliensis	1745713	PRJEB13908	321140	Terrabacteria group	Firmicutes	4.21945	45.2	-	FLKG01	11	4037	3882	5/13/16	4/12/17	Scaffold	URMITE	SAMEA3959520	GCA_900086725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/725/GCA_900086725.1_PRJEB13908	-	AT12
Neglecta timonensis	1776382	PRJEB12697	311691	Terrabacteria group	Firmicutes	3.6716	52.8	-	FIZH01	14	3348	3236	2/12/16	4/12/17	Scaffold	URMITE	SAMEA3869492	GCA_900048895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/895/GCA_900048895.1_PRJEB12697	-	SN17
Romboutsia timonensis	1776391	PRJEB14233	324389	Terrabacteria group	Firmicutes	3.11248	27.3	-	FNMT01	21	2989	2826	10/22/16	4/13/17	Scaffold	URMITE	SAMEA4521287	GCA_900106845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/845/GCA_900106845.1_PRJEB14233	-	Marseille-P326
Bacillus mediterraneensis	1805474	PRJEB17078	351711	Terrabacteria group	Firmicutes	3.34096	42.3	-	FOJL01	28	3476	3261	10/31/16	4/13/17	Scaffold	URMITE	SAMEA4526347	GCA_900111815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/815/GCA_900111815.1_PRJEB17078	-	Marseille-P2366
Pseudomonas canadensis	915099	PRJNA224560	224560	Proteobacteria	Gammaproteobacteria	6.41961	60.4	-	AYTD01	19	5974	5782	12/3/13	4/17/17	Scaffold	Agriculture and Agri-Food Canada	SAMN02469303	GCA_000503215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/215/GCA_000503215.1_Pseudomonas_sp_2-92_R01	24407636	Feb-92
Candidatus Peribacter riflensis	1735162	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.24785	58.5	chromosome:CP013065.1	-	1	1148	1101	11/3/15	3/15/16	Complete Genome	"Banfield Lab, University of California, Berkeley"	SAMN03842451	GCA_001430885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/430/885/GCA_001430885.1_ASM143088v1	-	-
Candidatus Peribacter riflensis	1735162	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	1.24818	58.5	chromosome:CP013066.1	-	1	1150	1103	11/3/15	3/15/16	Complete Genome	"Banfield Lab, University of California, Berkeley"	SAMN03842452	GCA_001430905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/430/905/GCA_001430905.1_ASM143090v1	-	-
Bifidobacterium dentium JCM 1195 = DSM 20436	1150423	PRJDB59	275714	Terrabacteria group	Actinobacteria	2.63567	58.5	chromosome Unknown:NZ_AP012326.1/AP012326.1	-	1	2239	2140	2/17/15	4/3/17	Complete Genome	"Graduate School of Frontier Sciences, University of Tokyo"	SAMD00061043	GCA_001042595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/595/GCA_001042595.1_ASM104259v1	25858847	JCM 1195
Flavobacteriaceae bacterium A100	1917170	PRJNA352880	352880	FCB group	Bacteroidetes/Chlorobi group	5.64594	33.3	-	MPGM01	65	5148	5018	12/1/16	4/16/17	Contig	College of Marine Science	SAMN06006552	GCA_001887885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/885/GCA_001887885.1_ASM188788v1	-	A100
Rappaport israeli	1839807	PRJNA318144	318144	Proteobacteria	Gammaproteobacteria	1.75084	45.2	-	LXHZ01	58	1840	1435	12/1/16	3/2/17	Contig	Bar-Ilan University	SAMN04631816	GCA_001888055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/055/GCA_001888055.1_ASM188805v1	-	B08008
Chitinophaga sancti	1004	PRJEB17762	353200	FCB group	Bacteroidetes/Chlorobi group	8.24411	44.2	-	FPIZ01	88	6662	6463	11/12/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05661012	GCA_900119105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/105/GCA_900119105.1_IMG-taxon_2595699005_annotated_assembly	-	DSM 784
Prevotellaceae bacterium HUN156	1520830	PRJEB17768	353206	FCB group	Bacteroidetes/Chlorobi group	2.79868	45.3	-	FPIT01	19	2309	2228	11/12/16	4/14/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910409	GCA_900119285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/285/GCA_900119285.1_IMG-taxon_2593339271_annotated_assembly	-	HUN156
Cellulophaga fucicola	76595	PRJEB17761	353199	FCB group	Bacteroidetes/Chlorobi group	3.92204	32.1	-	FPIY01	22	3460	3395	11/12/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660313	GCA_900119145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/145/GCA_900119145.1_IMG-taxon_2595699004_annotated_assembly	-	DSM 24786
Sinomicrobium oceani	1150368	PRJEB17756	353209	FCB group	Bacteroidetes/Chlorobi group	5.02627	44.8	-	FPJE01	58	4276	4138	11/12/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02927921	GCA_900119185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/185/GCA_900119185.1_IMG-taxon_2596583572_annotated_assembly	-	CGMCC 1.12145
Amycolatopsis australiensis	546364	PRJEB17763	353201	Terrabacteria group	Actinobacteria	9.31214	71.9	-	FPJG01	10	8655	8277	11/12/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04489730	GCA_900119165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/165/GCA_900119165.1_IMG-taxon_2642422517_annotated_assembly	-	DSM 44671
Marinospirillum alkaliphilum DSM 21637	1122209	PRJEB17965	353833	Proteobacteria	Gammaproteobacteria	3.13755	54.6	-	FPJW01	22	2945	2854	11/17/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745752	GCA_900119735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/735/GCA_900119735.1_IMG-taxon_2599185147_annotated_assembly	-	DSM 21637
Chitinimonas taiwanensis DSM 18899	1121279	PRJEB17966	353834	Proteobacteria	Betaproteobacteria	4.07524	62.9	-	FPKR01	29	3773	3667	11/18/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745887	GCA_900119825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/825/GCA_900119825.1_IMG-taxon_2599185263_annotated_assembly	-	DSM 18899
Devosia enhydra	665118	PRJEB17967	353835	Proteobacteria	Alphaproteobacteria	4.22171	65.6	-	FPKU01	5	4013	3924	11/20/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02983003	GCA_900119845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/845/GCA_900119845.1_IMG-taxon_2596583700_annotated_assembly	-	ATCC 23634
Flaviramulus basaltis	369401	PRJEB17420	351650	FCB group	Bacteroidetes/Chlorobi group	4.18856	31.1	-	FPKV01	32	3660	3578	11/22/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428642	GCA_900114265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/265/GCA_900114265.1_IMG-taxon_2675903155_annotated_assembly	-	DSM 18180
Chryseobacterium limigenitum	1612149	PRJEB17490	351661	FCB group	Bacteroidetes/Chlorobi group	4.69773	34.4	-	FPKW01	60	4324	4189	11/22/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216324	GCA_900114875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/875/GCA_900114875.1_IMG-taxon_2654587896_annotated_assembly	-	SUR2
Methanohalophilus portucalensis FDF-1	523843	PRJEB20447	382924	Euryarchaeota	Methanomicrobia	2.08889	41.9	-	FXBN01	9	2134	2038	4/21/17	5/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06264941	GCA_900177455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/455/GCA_900177455.1_IMG-taxon_2706794887_annotated_assembly	-	FDF-1
Duodenibacillus massiliensis	1852381	PRJEB18048	354753	Proteobacteria	Betaproteobacteria	2.35369	56.6	-	FQSD01	22	2256	2126	11/25/16	4/17/17	Scaffold	URMITE	SAMEA4555866	GCA_900128485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/485/GCA_900128485.1_PRJEB18048	-	Marseille-P2968
Candidatus Fukatsuia symbiotica	1878942	PRJEB15504	354740	Proteobacteria	Gammaproteobacteria	2.02659	42.9	-	FQSP01	77	1849	1659	11/26/16	4/14/17	Contig	Centre de Biologie pour la Gestion des Populations (CBGP - UMR1062)	SAMEA4556316	GCA_900128755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/755/GCA_900128755.1_FuCiconfinis_v1.0	-	FuCiconfinis
Planktothrix paucivesiculata PCC 9631	671071	PRJEB10994	355104	Terrabacteria group	Cyanobacteria/Melainabacteria group	68.0035	49.1	-	CZCS01	184	5177	4871	11/28/16	4/16/17	Scaffold	Genoscope CEA	SAMEA3590986	GCA_900009265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/265/GCA_900009265.1_BBR_PRJEB10994	-	-
Streptomyces viridifaciens	48665	PRJNA353578	353578	Terrabacteria group	Actinobacteria	9.56068	72.1	-	MPLE01	4	8699	7845	12/5/16	3/14/17	Scaffold	"Leiden University, Institute Biology Leiden"	SAMN06016489	GCA_001888885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/885/GCA_001888885.1_ASM188888v1	-	DSM 40239
Suttonella ornithocola	279832	PRJNA318147	318147	Proteobacteria	Gammaproteobacteria	2.51957	39.7	-	LWHB01	367	2784	2372	12/5/16	4/17/17	Contig	Bar-Ilan University	SAMN04631817	GCA_001889065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/065/GCA_001889065.1_ASM188906v1	-	CCUG 49457
Haloferax massiliensis	1476858	PRJEB5949	242464	Euryarchaeota	Halobacteria	4.01518	66.2	-	CSTE01	8	3925	3730	4/21/15	7/28/17	Scaffold	URMITE	SAMEA3309464	GCA_001368915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/915/GCA_001368915.1_PRJEB5949_assembly_1	-	Arc-Hr
Actinomyces ihumii	1673722	PRJEB11505	300215	Terrabacteria group	Actinobacteria	2.45835	58.9	-	CZPX01	5	2142	2047	10/29/15	4/11/17	Contig	URMITE	SAMEA3635089	GCA_001457875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/875/GCA_001457875.1_Actinomyces_ihumii	-	SD1
Emergencia timonensis	1776384	PRJEB13931	321144	Terrabacteria group	Firmicutes	4.66148	45.8	-	FLKM01	9	4379	4268	5/18/16	4/12/17	Contig	URMITE	SAMEA3959737	GCA_900086585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/585/GCA_900086585.1_PRJEB13931	-	SN18
Christensenella timonensis	1816678	PRJEB13910	321141	Terrabacteria group	Firmicutes	2.65085	51.7	-	FLKP01	2	2504	2403	5/19/16	4/12/17	Contig	URMITE	SAMEA3959561	GCA_900087015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/015/GCA_900087015.1_PRJEB13910	-	Marseille-P2437
Bacteroides mediterraneensis	1841856	PRJEB18046	354751	FCB group	Bacteroidetes/Chlorobi group	4.0757	47.5	-	FQRZ01	18	3482	3309	11/25/16	4/16/17	Scaffold	URMITE	SAMEA4555839	GCA_900128455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/455/GCA_900128455.1_PRJEB18046	-	Marseille-P2644
bacterium CG10_46_32	1911907	PRJNA349044	349044	unclassified Bacteria	unclassified Bacteria (miscellaneous)	1.00092	45.8	-	MOEI01	35	1021	942	12/6/16	12/6/16	Scaffold	UC Berkeley	SAMN05928258	GCA_001889965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/965/GCA_001889965.1_ASM188996v1	-	-
bacterium CG10_37_50	1911686	PRJNA349044	349044	unclassified Bacteria	unclassified Bacteria (miscellaneous)	0.446176	37.2	-	MOEJ01	36	475	387	12/6/16	12/6/16	Scaffold	UC Berkeley	SAMN05928259	GCA_001890025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/025/GCA_001890025.1_ASM189002v1	-	-
bacterium CG09_39_24	1911906	PRJNA349044	349044	unclassified Bacteria	unclassified Bacteria (miscellaneous)	0.592841	39.1	-	MOEH01	44	617	544	12/6/16	12/6/16	Scaffold	UC Berkeley	SAMN05928257	GCA_001890045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/045/GCA_001890045.1_ASM189004v1	-	-
bacterium CG10_49_38	1911687	PRJNA349044	349044	unclassified Bacteria	unclassified Bacteria (miscellaneous)	0.674219	49.1	-	MOEK01	30	746	657	12/6/16	12/6/16	Scaffold	UC Berkeley	SAMN05928260	GCA_001890035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/035/GCA_001890035.1_ASM189003v1	-	-
Culturomica massiliensis	1841857	PRJEB14541	326494	FCB group	Bacteroidetes/Chlorobi group	4.41059	43	-	FLSN01	11	3636	3523	6/23/16	4/13/17	Scaffold	URMITE	SAMEA4043117	GCA_900091655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/655/GCA_900091655.1_PRJEB14541	-	Marseille-P2698
Cellulosilyticum sp. I15G10I2	1892843	PRJEB11913	310549	Terrabacteria group	Firmicutes	4.49886	35.2	-	FMMP01	30	4233	4060	9/29/16	4/13/17	Contig	Griffith University	SAMEA4413790	GCA_900095725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/725/GCA_900095725.1_I15G10I2_draft_genome	-	-
Vibrio sonorensis	1004316	PRJNA294717	294717	Proteobacteria	Gammaproteobacteria	4.76784	44.3	-	LJJE01	138	4580	3909	10/26/16	4/17/17	Contig	"CIAD, A.C. Mazatlan Unit for Aquaculture"	SAMN04029016	GCA_001854765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/765/GCA_001854765.1_ASM185476v1	-	CAIM 1076
Phocea massiliensis	1841867	PRJEB16353	349289	Terrabacteria group	Firmicutes	2.58074	55.9	-	FNLI01	3	2472	2325	10/27/16	4/13/17	Scaffold	URMITE	SAMEA4519287	GCA_900104615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/615/GCA_900104615.1_PRJEB16353	-	Marseille-P2769
Mediterranea massiliensis	1841865	PRJEB18047	354752	FCB group	Bacteroidetes/Chlorobi group	3.94984	51.7	-	FQSB01	25	3443	3275	11/25/16	4/16/17	Scaffold	URMITE	SAMEA4555841	GCA_900128475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/475/GCA_900128475.1_PRJEB18047	-	Marseille-P2645
Spirulina major PCC 6313	129961	PRJNA158715	158715	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.05015	53.5	-	ALVQ01	2	4376	4185	11/18/16	4/17/17	Scaffold	JGI	SAMN02744077	GCA_001890765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/765/GCA_001890765.1_ASM189076v1	-	PCC 6313
Planktotalea frisia	696762	PRJNA347625	347625	Proteobacteria	Alphaproteobacteria	4.10674	53.8	-	MLCB01	227	4137	3970	12/7/16	4/17/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05893588	GCA_001890925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/925/GCA_001890925.1_ASM189092v1	-	SH6-1
marine bacterium AO1-C	1905359	PRJNA344428	344428	FCB group	Bacteroidetes/Chlorobi group	11.3465	38.7	-	MLAY01	40	9066	8908	12/7/16	12/7/16	Contig	Australian Institute of Marine Science	SAMN05827322	GCA_001890965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/965/GCA_001890965.1_ASM189096v1	-	-
Roseofilum reptotaenium AO1-A	1925591	PRJNA344428	344428	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.82618	44.8	-	MLAW01	134	5203	4978	12/7/16	12/7/16	Contig	Australian Institute of Marine Science	SAMN05823501	GCA_001890975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/975/GCA_001890975.1_ASM189097v1	-	-
Alphaproteobacteria bacterium AO1-B	1905358	PRJNA344428	344428	Proteobacteria	Alphaproteobacteria	5.22945	56.4029	plasmid unnamed:CM007608.1	MLAX01	13	4859	4802	12/7/16	12/8/16	Contig	Australian Institute of Marine Science	SAMN05827319	GCA_001890945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/945/GCA_001890945.1_ASM189094v1	-	-
Streptobacillus ratti	1720557	PRJNA294926	294926	Fusobacteria	Fusobacteriia	1.4307	26	-	LKKW01	146	1349	1262	12/8/16	4/16/17	Contig	Robert Koch Institute	SAMN04099675	GCA_001891165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/165/GCA_001891165.1_ASM189116v1	-	OGS16
Mariprofundus micogutta	1921010	PRJDB4892	354991	Proteobacteria	Zetaproteobacteria	2.49781	48.8	-	BDFD01	59	2459	2372	11/25/16	4/24/17	Contig	"Chemosymbiosis system genomics Team, Extremobiosphere Research Program, Institute of Biogeosciences, Japan Agency for Marine-Earth Science and Technology"	SAMD00053330	GCA_001895085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/085/GCA_001895085.1_ASM189508v1	27766355	ET2
Bifidobacterium lemurum	1603886	PRJDB5222	353270	Terrabacteria group	Actinobacteria	2.91202	62.6	-	BDIS01	47	2336	2221	11/10/16	4/16/17	Contig	"Division of Epigenomics and Development, Department of Molecular Genetics"	SAMD00065376	GCA_001895165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/165/GCA_001895165.1_ASM189516v1	-	DSM 28807
Planktothrix serta PCC 8927	671068	PRJEB10992	355102	Terrabacteria group	Cyanobacteria/Melainabacteria group	55.1765	48.8	-	CZCU01	157	5537	5277	11/28/16	4/16/17	Scaffold	Genoscope CEA	SAMEA3590991	GCA_900010725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/725/GCA_900010725.1_BBR_PRJEB10992	-	-
Planktothrix sp. PCC 11201	1729650	PRJEB10991	355101	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.98782	40.2	-	CZCT02	103	5093	4784	11/28/16	3/18/17	Scaffold	Genoscope CEA	SAMEA3590992	GCA_900009135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/135/GCA_900009135.2_BBR_PRJEB10991_v2	-	-
Planktothrix tepida PCC 9214	671072	PRJEB10993	355103	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.78186	39.5	-	CZDF01	191	5800	5493	11/28/16	4/16/17	Scaffold	Genoscope CEA	SAMEA3590990	GCA_900009145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/145/GCA_900009145.1_BBR_PRJEB10993	-	-
Halomonas ilicicola DSM 19980	1121942	PRJEB18151	355460	Proteobacteria	Gammaproteobacteria	3.96029	63.1	-	FQUJ01	40	3728	3582	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745148	GCA_900128925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/925/GCA_900128925.1_IMG-taxon_2582581268_annotated_assembly	-	DSM 19980
Rhodothermus profundi	633813	PRJEB18351	355809	FCB group	Bacteroidetes/Chlorobi group	3.13969	59.1	-	FRAU01	18	2692	2605	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488087	GCA_900142415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/415/GCA_900142415.1_IMG-taxon_2622736637_annotated_assembly	-	DSM 22212
Arenibacter nanhaiticus	558155	PRJEB18304	355723	FCB group	Bacteroidetes/Chlorobi group	4.36245	39	-	FQYX01	85	3616	3437	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487911	GCA_900141935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/935/GCA_900141935.1_IMG-taxon_2617270930_annotated_assembly	-	CGMCC 1.8863
Salinicoccus alkaliphilus DSM 16010	1123231	PRJEB18390	355776	Terrabacteria group	Firmicutes	2.51666	48.2	-	FRCF01	26	2564	2462	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745189	GCA_900142805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/805/GCA_900142805.1_IMG-taxon_2582580728_annotated_assembly	-	DSM 16010
Fibrobacter sp. UWR2	1964352	PRJNA376435	376435	FCB group	Fibrobacteres	3.27805	53.4	-	MWQE01	20	2762	2651	6/28/17	6/30/17	Contig	University of Wisconsin - Madison	SAMN06392823	GCA_002210285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/210/285/GCA_002210285.1_ASM221028v1	-	UWR2
Anaerosalibacter massiliensis	1347392	PRJEB4196	209454	Terrabacteria group	Firmicutes	3.1966	29.7	-	CCEZ01	82	3213	3061	7/31/14	4/9/17	Scaffold	URMITE	SAMEA2537694	GCA_000751555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/555/GCA_000751555.1_Anaerosalibacter_massiliensis_ND1	-	-
Virgibacillus senegalensis	1499679	PRJEB6466	251835	Terrabacteria group	Firmicutes	3.87593	42.8	-	CCXU01	59	3838	3654	9/29/14	8/22/15	Contig	URMITE	SAMEA2785595	GCA_000821245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/245/GCA_000821245.1_Virgibacillus_senegalensis	-	SK-1
Microvirga massiliensis	1033741	PRJEB8433	282727	Proteobacteria	Alphaproteobacteria	9.17213	62.8	-	CDSD01	50	8575	8045	4/29/15	4/10/17	Scaffold	URMITE	SAMEA3246152	GCA_001006805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/805/GCA_001006805.1_Microvirga_massiliensis_JC119	-	JC119
Tissierella sp. P1	1280483	PRJNA397253	397253	Terrabacteria group	Firmicutes	4.38666	31.3	-	NPMN01	94	4354	3939	8/22/17	8/24/17	Contig	Tomsk State University	SAMN07452740	GCA_002266425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/425/GCA_002266425.1_ASM226642v1	-	P1
Porphyromonadaceae bacterium FC4	1720317	PRJEB18035	354760	FCB group	Bacteroidetes/Chlorobi group	2.12542	51.9	-	FQLV01	4	1707	1636	11/24/16	4/14/17	Scaffold	URMITE	SAMEA4555320	GCA_900120395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/395/GCA_900120395.1_PRJEB18035	-	FC4
methanotrophic endosymbiont of Bathymodiolus azoricus (Menez Gwen)	343232	PRJEB13769	343299	unclassified Bacteria	unclassified Bacteria (miscellaneous)	1.72768	39	-	FMJP01	1094	1560	1536	9/18/16	12/14/16	Contig	MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY	SAMEA4360701	GCA_900094635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/635/GCA_900094635.1_BAZMOX	-	-
Duganella sacchari	551987	PRJEB18415	355829	Proteobacteria	Betaproteobacteria	6.67568	61.5	-	FRCX01	37	5965	5779	12/3/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192549	GCA_900143065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/065/GCA_900143065.1_IMG-taxon_2651870174_annotated_assembly	-	Sac-22
Cryptosporangium aurantiacum	134849	PRJEB18410	355824	Terrabacteria group	Actinobacteria	9.57992	71.2	-	FRCS01	44	8755	8496	12/3/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05443668	GCA_900143005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/005/GCA_900143005.1_IMG-taxon_2700988713_annotated_assembly	-	DSM 46144
Desulfovibrio litoralis DSM 11393	1121455	PRJEB18448	356028	Proteobacteria	delta/epsilon subdivisions	2.74142	36.9	-	FRDI01	27	2434	2347	12/3/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745728	GCA_900143255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/255/GCA_900143255.1_IMG-taxon_2582580730_annotated_assembly	-	DSM 11393
Fervidobacterium gondwanense DSM 13020	1121883	PRJEB18449	356029	Thermotogae	Thermotogae	2.14602	39.7	-	FRDJ01	26	2041	1936	12/3/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745226	GCA_900143265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/265/GCA_900143265.1_IMG-taxon_2582580731_annotated_assembly	-	DSM 13020
Desulfitobacterium chlororespirans DSM 11544	1121395	PRJEB18450	356021	Terrabacteria group	Firmicutes	5.60698	47.3	-	FRDN01	33	5415	5127	12/3/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745215	GCA_900143285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/285/GCA_900143285.1_IMG-taxon_2582580732_annotated_assembly	-	DSM 11544
Porphyrobacter sanguineus	198312	PRJEB18447	356027	Proteobacteria	Alphaproteobacteria	2.9788	63.8	-	FRDF01	25	2850	2730	12/3/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02745193	GCA_900143235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/235/GCA_900143235.1_IMG-taxon_2582580729_annotated_assembly	-	DSM 11032
Clostridium amylolyticum	1121298	PRJEB18317	355773	Terrabacteria group	Firmicutes	4.26246	32.1	-	FQZO01	20	4039	3903	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444401	GCA_900142075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/075/GCA_900142075.1_IMG-taxon_2703719061_annotated_assembly	-	DSM 21864
Chitinophaga jiangningensis	1419482	PRJEB18370	355788	FCB group	Bacteroidetes/Chlorobi group	7.18213	47.4	-	FRBL01	25	5805	5636	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444266	GCA_900142605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/605/GCA_900142605.1_IMG-taxon_2700988700_annotated_assembly	-	DSM 27406
Geitlerinema sp. PCC 7407	1173025	PRJNA158833	158833	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.68111	58.5	chromosome:NC_019703.1/CP003591.1	-	1	3921	3789	12/5/12	4/8/17	Complete Genome	JGI	SAMN02261348	GCA_000317045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/045/GCA_000317045.1_ASM31704v1	-	PCC 7407
Nocardiopsis flavescens	758803	PRJEB18308	355727	Terrabacteria group	Actinobacteria	7.17293	74.1	-	FQZK01	71	6203	6008	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421803	GCA_900141985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/985/GCA_900141985.1_IMG-taxon_2675903133_annotated_assembly	-	CGMCC 4.5723
Marivita hallyeonensis	996342	PRJEB18239	355542	Proteobacteria	Alphaproteobacteria	4.19322	60.4	-	FQXC01	20	4151	4069	12/2/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443551	GCA_900129875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/875/GCA_900129875.1_IMG-taxon_2695421018_annotated_assembly	-	DSM 29431
Thermomonas hydrothermalis	213588	PRJEB18155	355464	Proteobacteria	Gammaproteobacteria	2.44872	66.1	-	FQUK01	85	2362	2172	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745204	GCA_900129205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/205/GCA_900129205.1_IMG-taxon_2582581272_annotated_assembly	-	DSM 14834
Lactonifactor longoviformis DSM 17459	1122155	PRJEB18166	355454	Terrabacteria group	Firmicutes	4.83929	46.4	-	FQVI01	76	4480	4289	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745158	GCA_900129135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/135/GCA_900129135.1_IMG-taxon_2585428044_annotated_assembly	-	DSM 17459
Thalassobius maritimus	870908	PRJEB18220	355484	Proteobacteria	Alphaproteobacteria	3.28491	56.3	-	FQWM01	14	3305	3204	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488044	GCA_900129685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/685/GCA_900129685.1_IMG-taxon_2617270829_annotated_assembly	-	DSM 28223
Tepidibacter thalassicus DSM 15285	1123350	PRJEB18243	355526	Terrabacteria group	Firmicutes	2.23437	27.9	-	FQXH01	57	2267	2148	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02744040	GCA_900129915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/915/GCA_900129915.1_IMG-taxon_2585428065_annotated_assembly	-	DSM 15285
Arenibacter palladensis	237373	PRJEB18160	355458	FCB group	Bacteroidetes/Chlorobi group	5.55191	39.7	-	FQUX01	27	4519	4422	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03080594	GCA_900129275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/275/GCA_900129275.1_IMG-taxon_2634166303_annotated_assembly	-	DSM 17539
Loktanella atrilutea	366533	PRJEB18167	355455	Proteobacteria	Alphaproteobacteria	4.20602	64.9	-	FQUE01	46	4059	3901	12/2/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444339	GCA_900128995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/995/GCA_900128995.1_IMG-taxon_2695420928_annotated_assembly	-	DSM 29326
Sporanaerobacter acetigenes DSM 13106	1123281	PRJEB18254	355518	Terrabacteria group	Firmicutes	2.91278	31.2	-	FQXR01	34	2870	2747	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745180	GCA_900130025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/025/GCA_900130025.1_IMG-taxon_2585428081_annotated_assembly	-	DSM 13106
Ferrithrix thermotolerans DSM 19514	1121881	PRJEB18178	355445	Terrabacteria group	Actinobacteria	2.48954	51.1	-	FQUL01	95	2351	2238	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745225	GCA_900128965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/965/GCA_900128965.1_IMG-taxon_2582580746_annotated_assembly	-	DSM 19514
Flavisolibacter ginsengisoli DSM 18119	1121884	PRJEB18174	355441	FCB group	Bacteroidetes/Chlorobi group	4.67746	40.6	-	FQUU01	55	4163	4049	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745131	GCA_900129295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/295/GCA_900129295.1_IMG-taxon_2582580745_annotated_assembly	-	DSM 18119
Flavobacterium haoranii	683124	PRJEB18312	355768	FCB group	Bacteroidetes/Chlorobi group	2.84683	31.1	-	FQZH01	13	2660	2582	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444337	GCA_900142055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/055/GCA_900142055.1_IMG-taxon_2695421039_annotated_assembly	-	DSM 22807
Labrenzia suaedae	735517	PRJEB18382	355779	Proteobacteria	Alphaproteobacteria	5.14283	60.2	-	FRBW01	14	4589	4496	12/2/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444272	GCA_900142725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/725/GCA_900142725.1_IMG-taxon_2698536749_annotated_assembly	-	DSM 22153
Marinobacter antarcticus	564117	PRJEB18348	355744	Proteobacteria	Gammaproteobacteria	3.74079	54.9	-	FRAQ01	11	3486	3370	12/2/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216369	GCA_900142385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/385/GCA_900142385.1_IMG-taxon_2667527391_annotated_assembly	-	CGMCC 1.10835
Marinomonas polaris DSM 16579	1122206	PRJEB18153	355462	Proteobacteria	Gammaproteobacteria	5.03854	42.5	-	FQVF01	52	4680	4501	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745753	GCA_900129155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/155/GCA_900129155.1_IMG-taxon_2582581270_annotated_assembly	-	DSM 16579
Chryseobacterium takakiae	1302685	PRJEB18190	355425	FCB group	Bacteroidetes/Chlorobi group	4.19811	37	-	FQVO01	44	3792	3676	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444408	GCA_900129385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/385/GCA_900129385.1_IMG-taxon_2695420944_annotated_assembly	-	DSM 26898
Chryseolinea serpens	947013	PRJEB18224	355488	FCB group	Bacteroidetes/Chlorobi group	8.3576	51.1	-	FQWQ01	10	6883	6768	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488109	GCA_900129725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/725/GCA_900129725.1_IMG-taxon_2617270831_annotated_assembly	-	DSM 24574
Clostridium collagenovorans DSM 3089	1121306	PRJEB18252	355516	Terrabacteria group	Firmicutes	3.4824	29	-	FQXP01	30	3031	2918	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745196	GCA_900130005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/005/GCA_900130005.1_IMG-taxon_2585428078_annotated_assembly	-	DSM 3089
Desulfacinum infernum DSM 9756	1121391	PRJEB18182	355438	Proteobacteria	delta/epsilon subdivisions	4.23982	62	-	FQVB01	81	3713	3584	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745206	GCA_900129305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/305/GCA_900129305.1_IMG-taxon_2582580750_annotated_assembly	-	DSM 9756
Cnuella takakiae	1302690	PRJNA357988	357988	FCB group	Bacteroidetes/Chlorobi group	5.69605	50	-	MTFE01	10	4747	4581	1/17/17	4/16/17	Scaffold	Capital Normal University	SAMN06163200	GCA_001953305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/305/GCA_001953305.1_ASM195330v1	-	RG1-1
Desulfotomaculum aeronauticum DSM 10349	1121421	PRJEB18347	355743	Terrabacteria group	Firmicutes	4.02096	43.6	-	FRAR01	59	3911	3723	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745123	GCA_900142375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/375/GCA_900142375.1_IMG-taxon_2585428189_annotated_assembly	-	DSM 10349
Mariniphaga anaerophila	1484053	PRJEB18183	355429	FCB group	Bacteroidetes/Chlorobi group	5.0483	41.8	-	FQUM01	45	3996	3891	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444274	GCA_900129025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/025/GCA_900129025.1_IMG-taxon_2695420943_annotated_assembly	-	DSM 26910
Candidimonas bauzanensis	658167	PRJEB18240	355523	Proteobacteria	Betaproteobacteria	5.64141	62.2	-	FQXE01	41	5246	5085	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488135	GCA_900129885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/885/GCA_900129885.1_IMG-taxon_2617270875_annotated_assembly	-	CGMCC 1.10190
Aliifodinibius roseus	1194090	PRJEB18173	355440	Balneolaeota	Balneolia	5.08224	48.3	-	FQUS01	64	4181	4081	12/2/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443144	GCA_900129315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/315/GCA_900129315.1_IMG-taxon_2695420936_annotated_assembly	-	DSM 21986
Cyclobacterium lianum	388280	PRJEB18417	355831	FCB group	Bacteroidetes/Chlorobi group	5.67516	45.5	-	FRCY01	31	4756	4608	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488057	GCA_900143075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/075/GCA_900143075.1_IMG-taxon_2617270779_annotated_assembly	-	CGMCC 1.6102
Chryseobacterium arachidis	1416778	PRJEB18168	355456	FCB group	Bacteroidetes/Chlorobi group	4.94787	35.6	-	FQUT01	34	4523	4376	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443633	GCA_900129245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/245/GCA_900129245.1_IMG-taxon_2695420930_annotated_assembly	-	DSM 27619
Chishuiella changwenlii	1434701	PRJEB18366	355804	FCB group	Bacteroidetes/Chlorobi group	3.44392	29.6	-	FRBH01	24	3174	3068	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05443634	GCA_900142565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/565/GCA_900142565.1_IMG-taxon_2700988695_annotated_assembly	-	DSM 27989
Loktanella sediminum	1508389	PRJEB18236	355539	Proteobacteria	Alphaproteobacteria	3.25749	54.4	-	FQXB01	16	3289	3211	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444003	GCA_900129845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/845/GCA_900129845.1_IMG-taxon_2695421013_annotated_assembly	-	DSM 28715
Hathewaya proteolytica DSM 3090	1121331	PRJEB18332	355748	Terrabacteria group	Firmicutes	2.81802	34.1	-	FRAD01	45	2721	2587	12/2/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745248	GCA_900142225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/225/GCA_900142225.1_IMG-taxon_2585428174_annotated_assembly	-	DSM 3090
Nissabacter archeti	1917880	PRJEB18266	355715	Proteobacteria	Gammaproteobacteria	5.16212	58.3	-	FQXW01	50	4719	4533	12/2/16	3/15/17	Contig	URMITE	SAMEA17980918	GCA_900130115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/115/GCA_900130115.1_PRJEB18266	-	2134
Malonomonas rubra DSM 5091	1122189	PRJEB18322	355758	Proteobacteria	delta/epsilon subdivisions	3.96163	52.5	-	FQZT01	42	3695	3549	12/2/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02745165	GCA_900142125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/125/GCA_900142125.1_IMG-taxon_2585428155_annotated_assembly	-	DSM 5091
Flavobacterium saccharophilum	29534	PRJEB18383	355780	FCB group	Bacteroidetes/Chlorobi group	5.20931	34	-	FRBY01	14	4420	4345	12/2/16	5/22/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444366	GCA_900142735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/735/GCA_900142735.1_IMG-taxon_2698536752_annotated_assembly	-	DSM 1811
Schwartzia succinivorans DSM 10502	1123243	PRJEB18145	355479	Terrabacteria group	Firmicutes	2.65957	46.8	-	FQUG01	21	2486	2374	12/2/16	8/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745190	GCA_900129225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/225/GCA_900129225.1_IMG-taxon_2582581261_annotated_assembly	-	DSM 10502
Salegentibacter echinorum	1073325	PRJEB18196	355471	FCB group	Bacteroidetes/Chlorobi group	3.9673	37.2	-	FQVT01	40	3464	3370	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444483	GCA_900129445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/445/GCA_900129445.1_IMG-taxon_2695420921_annotated_assembly	-	DSM 24579
Roseomonas rosea	198092	PRJEB18302	355721	Proteobacteria	Alphaproteobacteria	5.34258	70.8	-	FQZF01	81	5043	4850	12/2/16	5/22/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745194	GCA_900141905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/905/GCA_900141905.1_IMG-taxon_2585427600_annotated_assembly	-	DSM 14916
Pseudozobellia thermophila	192903	PRJEB18297	355692	FCB group	Bacteroidetes/Chlorobi group	5.03682	47.1	-	FQYU01	36	4248	4136	12/2/16	8/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488513	GCA_900141855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/855/GCA_900141855.1_IMG-taxon_2622736519_annotated_assembly	-	DSM 19858
Parasporobacterium paucivorans DSM 15970	1122934	PRJEB18299	355694	Terrabacteria group	Firmicutes	2.44376	44.1	-	FQYT01	53	2423	2300	12/2/16	8/21/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02745691	GCA_900141895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/895/GCA_900141895.1_IMG-taxon_2585427596_annotated_assembly	-	DSM 15970
Dethiosulfatibacter aminovorans DSM 17477	1121476	PRJEB18310	355766	Terrabacteria group	Firmicutes	4.03412	40	-	FQZL01	81	3651	3531	12/2/16	8/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745751	GCA_900142005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/005/GCA_900142005.1_IMG-taxon_2585428150_annotated_assembly	-	DSM 17477
Clostridium fallax	1533	PRJEB18188	355434	Terrabacteria group	Firmicutes	2.74734	26.5	-	FQVM01	64	2555	2416	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443638	GCA_900129365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/365/GCA_900129365.1_IMG-taxon_2695420941_annotated_assembly	-	DSM 2631
Caminicella sporogenes DSM 14501	1121266	PRJEB18338	355754	Terrabacteria group	Firmicutes	2.47392	28.6	-	FRAJ01	43	2398	2263	12/2/16	8/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745883	GCA_900142285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/285/GCA_900142285.1_IMG-taxon_2585428193_annotated_assembly	-	DSM 14501
Streptomyces paucisporeus	310782	PRJEB18367	355805	Terrabacteria group	Actinobacteria	8.16437	72.2	-	FRBI01	79	7078	6674	12/2/16	3/15/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216499	GCA_900142575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/575/GCA_900142575.1_IMG-taxon_2667527448_annotated_assembly	-	CGMCC 4.2025
Hydrocarboniphaga daqingensis	490188	PRJEB18234	355537	Proteobacteria	Gammaproteobacteria	3.80068	65.3	-	FQWZ01	13	3331	3233	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488068	GCA_900129825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/825/GCA_900129825.1_IMG-taxon_2619618894_annotated_assembly	-	CGMCC 1.7049
Leeuwenhoekiella palythoae	573501	PRJEB18256	355520	FCB group	Bacteroidetes/Chlorobi group	4.03	39.9	-	FQXT01	14	3419	3348	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487999	GCA_900130045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/045/GCA_900130045.1_IMG-taxon_2622736499_annotated_assembly	-	DSM 19859
Clostridium cavendishii DSM 21758	1121302	PRJEB18294	355689	Terrabacteria group	Firmicutes	4.98767	27.9	-	FQZB01	56	4488	4325	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745163	GCA_900141845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/845/GCA_900141845.1_IMG-taxon_2585428089_annotated_assembly	-	DSM 21758
Marinitoga hydrogenitolerans DSM 16785	1122195	PRJEB18165	355453	Thermotogae	Thermotogae	2.31237	27.2	-	FQUI01	87	2234	2095	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745164	GCA_900129175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/175/GCA_900129175.1_IMG-taxon_2585428042_annotated_assembly	-	DSM 16785
Flavobacterium segetis	271157	PRJEB18209	355513	FCB group	Bacteroidetes/Chlorobi group	3.464	32.6	-	FQWE01	30	2936	2822	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444396	GCA_900129575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/575/GCA_900129575.1_IMG-taxon_2695420957_annotated_assembly	-	DSM 19741
Geodermatophilus nigrescens	1070870	PRJEB18201	355505	Terrabacteria group	Actinobacteria	4.74087	75.9	-	FQVX01	11	4578	4463	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444351	GCA_900129495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/495/GCA_900129495.1_IMG-taxon_2695420953_annotated_assembly	-	DSM 45408
Pseudomonas asturiensis	1190415	PRJEB18419	355823	Proteobacteria	Gammaproteobacteria	6.1741	59.1	-	FRDA01	42	5625	5418	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216593	GCA_900143095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/095/GCA_900143095.1_IMG-taxon_2663762795_annotated_assembly	-	LMG 26898
Desulfosporosinus lacus DSM 15449	1121420	PRJEB18245	355528	Terrabacteria group	Firmicutes	5.55802	42	-	FQXJ01	52	5276	4982	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02746098	GCA_900129935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/935/GCA_900129935.1_IMG-taxon_2585428067_annotated_assembly	-	DSM 15449
Rubritalea squalenifaciens DSM 18772	1123071	PRJEB18286	355702	PVC group	Verrucomicrobia	4.32249	52	-	FQYR01	17	3882	3805	12/2/16	12/2/16	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745181	GCA_900141815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/815/GCA_900141815.1_IMG-taxon_2582581871_annotated_assembly	-	DSM 18772
Kaistia soli DSM 19436	1122133	PRJEB18164	355452	Proteobacteria	Alphaproteobacteria	5.23779	64.5	-	FQUP01	15	4982	4851	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745157	GCA_900129325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/325/GCA_900129325.1_IMG-taxon_2582581302_annotated_assembly	-	DSM 19436
Tepidibacter formicigenes DSM 15518	1123349	PRJEB18333	355749	Terrabacteria group	Firmicutes	2.63983	27.8	-	FRAE01	149	2635	2464	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02744037	GCA_900142235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/235/GCA_900142235.1_IMG-taxon_2585428175_annotated_assembly	-	DSM 15518
Clostridium caminithermale DSM 15212	1121301	PRJEB18334	355750	Terrabacteria group	Firmicutes	4.06062	30.6	-	FRAG01	155	3762	3551	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745912	GCA_900142245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/245/GCA_900142245.1_IMG-taxon_2585428176_annotated_assembly	-	DSM 15212
Anaerobranca californiensis DSM 14826	1120989	PRJEB18337	355753	Terrabacteria group	Firmicutes	2.03446	33.4	-	FRAI01	51	2110	1978	12/2/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02745227	GCA_900142275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/275/GCA_900142275.1_IMG-taxon_2585428191_annotated_assembly	-	DSM 14826
Chryseobacterium molle	216903	PRJEB18342	355738	FCB group	Bacteroidetes/Chlorobi group	3.69536	37.5	-	FRAM01	13	3376	3289	12/2/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444371	GCA_900142325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/325/GCA_900142325.1_IMG-taxon_2698536696_annotated_assembly	-	DSM 18016
Pantoea sesami	1881110	PRJEB18214	355498	Proteobacteria	Gammaproteobacteria	4.91151	55.7	-	FQWJ01	35	4818	4599	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05428958	GCA_900129625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/625/GCA_900129625.1_IMG-taxon_2675903011_annotated_assembly	-	Si-M154
Paracoccus solventivorans	53463	PRJEB18397	355733	Proteobacteria	Alphaproteobacteria	3.3776	68.7	-	FRCK01	27	3220	3113	12/2/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444389	GCA_900142875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/875/GCA_900142875.1_IMG-taxon_2695420926_annotated_assembly	-	DSM 6637
Roseovarius pacificus	337701	PRJEB18376	355794	Proteobacteria	Alphaproteobacteria	4.54703	62	-	FRBR01	52	4416	4300	12/2/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444398	GCA_900142665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/665/GCA_900142665.1_IMG-taxon_2700988706_annotated_assembly	-	DSM 29589
Sporobacter termitidis DSM 10068	1123282	PRJEB18258	355522	Terrabacteria group	Firmicutes	4.19821	56.6	-	FQXV01	37	3863	3753	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745823	GCA_900130065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/065/GCA_900130065.1_IMG-taxon_2585428085_annotated_assembly	-	DSM 10068
Actinomyces glycerinitolerans	1892869	PRJEB15515	354980	Terrabacteria group	Actinobacteria	3.69525	68.5	-	FQTT01	19	3072	2941	12/2/16	4/16/17	Scaffold	WAGENINGEN UNIVERSITY	SAMEA4471185	GCA_900098745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/745/GCA_900098745.1_Acetnomyces_glycerinotoleransG10	-	-
Ornithinibacillus halophilus	930117	PRJEB18200	355504	Terrabacteria group	Firmicutes	3.46362	35.9	-	FQVW01	109	3468	3347	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216225	GCA_900129485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/485/GCA_900129485.1_IMG-taxon_2654588106_annotated_assembly	-	IBRC-M 10683
Anaerocolumna jejuensis DSM 15929	1121322	PRJEB18331	355747	Terrabacteria group	Firmicutes	6.62127	40.6	-	FRAC01	71	5754	5586	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745136	GCA_900142215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/215/GCA_900142215.1_IMG-taxon_2585428173_annotated_assembly	-	DSM 15929
Virgibacillus chiguensis	411959	PRJEB18238	355541	Terrabacteria group	Firmicutes	4.12832	36.6	-	FQXD01	45	3855	3674	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421807	GCA_900129865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/865/GCA_900129865.1_IMG-taxon_2675903063_annotated_assembly	-	CGMCC 1.6496
Streptoalloteichus hindustanus	2017	PRJEB18189	355435	Terrabacteria group	Actinobacteria	7.27938	72.6	-	FQVN01	33	6484	6269	12/2/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444320	GCA_900129375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/375/GCA_900129375.1_IMG-taxon_2695420942_annotated_assembly	-	DSM 44523
Pedobacter caeni	288992	PRJEB18162	355450	FCB group	Bacteroidetes/Chlorobi group	7.82878	41.4	-	FQUQ01	22	6680	6574	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488522	GCA_900129215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/215/GCA_900129215.1_IMG-taxon_2622736434_annotated_assembly	-	DSM 16990
Geosporobacter subterraneus DSM 17957	1121919	PRJEB18324	355760	Terrabacteria group	Firmicutes	3.85801	40.3	-	FQZV01	119	3856	3773	12/2/16	12/2/16	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745975	GCA_900142145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/145/GCA_900142145.1_IMG-taxon_2585428170_annotated_assembly	-	DSM 17957
Flavobacterium granuli	280093	PRJEB18222	355486	FCB group	Bacteroidetes/Chlorobi group	3.79814	35.6	-	FQWO01	34	3252	3150	12/2/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443373	GCA_900129705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/705/GCA_900129705.1_IMG-taxon_2695420922_annotated_assembly	-	DSM 19729
Anaerotignum lactatifermentans DSM 14214	1121323	PRJEB18336	355752	Terrabacteria group	Firmicutes	3.54608	45.3	-	FRAH01	163	3666	3337	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745138	GCA_900142265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/265/GCA_900142265.1_IMG-taxon_2585428190_annotated_assembly	-	DSM 14214
Aestuariibacter aggregatus	634436	PRJEB18208	355512	Proteobacteria	Gammaproteobacteria	4.91064	48.5	-	FQWD01	19	4359	4261	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216361	GCA_900129565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/565/GCA_900129565.1_IMG-taxon_2675903007_annotated_assembly	-	CGMCC 1.8995
Chryseobacterium polytrichastri	1302687	PRJEB18354	355812	FCB group	Bacteroidetes/Chlorobi group	5.14265	33.7	-	FRAV01	99	4639	4487	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444267	GCA_900142445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/445/GCA_900142445.1_IMG-taxon_2700988715_annotated_assembly	-	DSM 26899
Caloramator proteoclasticus DSM 10124	1121262	PRJEB18150	355459	Terrabacteria group	Firmicutes	2.65502	31.4	-	FQVG01	122	2613	2437	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02746091	GCA_900129265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/265/GCA_900129265.1_IMG-taxon_2582581267_annotated_assembly	-	DSM 10124
Anaerosphaera aminiphila DSM 21120	1120995	PRJEB18244	355527	Terrabacteria group	Firmicutes	2.02191	31.5	-	FQXI01	32	1951	1864	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02745245	GCA_900129925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/925/GCA_900129925.1_IMG-taxon_2585428066_annotated_assembly	-	DSM 21120
Clostridium grantii DSM 8605	1121316	PRJEB18248	355531	Terrabacteria group	Firmicutes	4.4745	29.3	-	FQXM01	87	4216	4025	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745207	GCA_900129965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/965/GCA_900129965.1_IMG-taxon_2585428070_annotated_assembly	-	DSM 8605
Bacillus rhizosphaerae	866786	PRJEB18377	355795	Terrabacteria group	Firmicutes	4.24304	44.8	-	FRBS01	13	4202	4065	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192535	GCA_900142675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/675/GCA_900142675.1_IMG-taxon_2654588196_annotated_assembly	-	"SC-N012,DSM 21911,NCCB 100267"
Jatrophihabitans endophyticus	1206085	PRJEB18197	355472	Terrabacteria group	Actinobacteria	4.48005	72.9	-	FQVU01	10	4232	4095	12/2/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443575	GCA_900129455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/455/GCA_900129455.1_IMG-taxon_2695420949_annotated_assembly	-	DSM 45627
Caldanaerovirga acetigignens	447595	PRJEB18409	355834	Terrabacteria group	Firmicutes	2.26471	43.3	-	FRCR01	36	2368	2204	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660826	GCA_900142995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/995/GCA_900142995.1_IMG-taxon_2599185231_annotated_assembly	-	DSM 18802
Reichenbachiella agariperforans	156994	PRJEB18330	355746	FCB group	Bacteroidetes/Chlorobi group	5.0341	43.4	-	FRAA01	21	4004	3889	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488028	GCA_900142205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/205/GCA_900142205.1_IMG-taxon_2616644810_annotated_assembly	-	DSM 26134
Tangfeifania diversioriginum	1168035	PRJEB18296	355691	FCB group	Bacteroidetes/Chlorobi group	4.77968	41.8	-	FQZE01	81	4075	3978	12/2/16	4/18/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444280	GCA_900141875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/875/GCA_900141875.1_IMG-taxon_2700988694_annotated_assembly	-	DSM 27063
Chryseobacterium carnipullorum	1124835	PRJEB18388	355785	FCB group	Bacteroidetes/Chlorobi group	5.15483	37.1	-	FRCD01	55	4645	4495	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444360	GCA_900142785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/785/GCA_900142785.1_IMG-taxon_2695420920_annotated_assembly	-	DSM 25581
Myroides xuanwuensis	1324934	PRJEB18373	355791	FCB group	Bacteroidetes/Chlorobi group	4.01749	34	-	FRBO01	37	3583	3403	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444275	GCA_900142635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/635/GCA_900142635.1_IMG-taxon_2700988703_annotated_assembly	-	DSM 27251
Pseudonocardia thermophila	1848	PRJEB18346	355742	Terrabacteria group	Actinobacteria	6.09821	72.9	-	FRAP01	47	5833	5616	12/2/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443637	GCA_900142365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/365/GCA_900142365.1_IMG-taxon_2700988696_annotated_assembly	-	DSM 43832
Thermosipho atlanticus DSM 15807	1123380	PRJEB18250	355514	Thermotogae	Thermotogae	1.63565	31.1	-	FQXN01	11	1643	1566	12/2/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02745199	GCA_900129985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/985/GCA_900129985.1_IMG-taxon_2585428073_annotated_assembly	-	DSM 15807
Paraburkholderia terricola	169427	PRJEB18329	355765	Proteobacteria	Betaproteobacteria	7.3214	63.6	-	FRAB01	114	6715	6388	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192548	GCA_900142195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/195/GCA_900142195.1_IMG-taxon_2654588105_annotated_assembly	-	LMG 20594
Caldanaerobius fijiensis DSM 17918	1121256	PRJEB18148	355482	Terrabacteria group	Firmicutes	2.76077	38.8	-	FQVH01	88	2769	2598	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02746089	GCA_900129075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/075/GCA_900129075.1_IMG-taxon_2582581265_annotated_assembly	-	DSM 17918
Spongiibacterium flavum	570519	PRJEB18218	355502	FCB group	Bacteroidetes/Chlorobi group	3.83616	42	-	FQWL01	14	3524	3450	12/2/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488116	GCA_900129665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/665/GCA_900129665.1_IMG-taxon_2617270824_annotated_assembly	-	DSM 22638
Desulfofustis glycolicus DSM 9705	1121409	PRJEB18253	355517	Proteobacteria	delta/epsilon subdivisions	4.9773	56.3	-	FQXS01	100	4488	4297	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745124	GCA_900130015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/015/GCA_900130015.1_IMG-taxon_2585428080_annotated_assembly	-	DSM 9705
Flavobacterium flevense	983	PRJEB18387	355784	FCB group	Bacteroidetes/Chlorobi group	4.23054	34.2	-	FRCC01	35	3573	3446	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05443543	GCA_900142775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/775/GCA_900142775.1_IMG-taxon_2700988729_annotated_assembly	-	DSM 1076
Maribacter aquivivus	228958	PRJEB18327	355763	FCB group	Bacteroidetes/Chlorobi group	4.5784	34.5	-	FQZX01	11	3986	3882	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488007	GCA_900142175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/175/GCA_900142175.1_IMG-taxon_2622736581_annotated_assembly	-	DSM 16478
Winogradskyella jejuensis	1089305	PRJEB18226	355490	FCB group	Bacteroidetes/Chlorobi group	3.0339	34.5	-	FQWS01	13	2837	2775	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444148	GCA_900129745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/745/GCA_900129745.1_IMG-taxon_2695420983_annotated_assembly	-	DSM 25330
Halomonas cupida	44933	PRJEB18385	355782	Proteobacteria	Gammaproteobacteria	4.95797	59.6	-	FRCA01	31	4411	4275	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660971	GCA_900142755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/755/GCA_900142755.1_IMG-taxon_2599185207_annotated_assembly	-	DSM 4740
Flavobacterium xanthum	69322	PRJEB18379	355797	FCB group	Bacteroidetes/Chlorobi group	3.75558	34.4	-	FRBU01	101	3287	3157	12/2/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443669	GCA_900142695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/695/GCA_900142695.1_IMG-taxon_2700988712_annotated_assembly	-	DSM 3661
Mesonia phycicola	579105	PRJEB18298	355693	FCB group	Bacteroidetes/Chlorobi group	3.28071	31.4	-	FQYY01	43	3000	2921	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488096	GCA_900141885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/885/GCA_900141885.1_IMG-taxon_2622736520_annotated_assembly	-	DSM 21425
Microbulbifer donghaiensis	494016	PRJEB18177	355444	Proteobacteria	Gammaproteobacteria	4.31426	59.7	-	FQVA01	16	3693	3601	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487965	GCA_900129095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/095/GCA_900129095.1_IMG-taxon_2619618825_annotated_assembly	-	CGMCC 1.7063
Hymenobacter psychrotolerans DSM 18569	1121959	PRJEB18349	355745	FCB group	Bacteroidetes/Chlorobi group	4.76775	60.8	-	FRAS01	64	4219	4060	12/2/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02746009	GCA_900142395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/395/GCA_900142395.1_IMG-taxon_2585428192_annotated_assembly	-	DSM 18569
Thermosyntropha lipolytica DSM 11003	1123382	PRJEB18232	355535	Terrabacteria group	Firmicutes	2.16923	42	-	FQWY01	96	2221	2048	12/2/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02745221	GCA_900129805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/805/GCA_900129805.1_IMG-taxon_2585428064_annotated_assembly	-	DSM 11003
Psychroflexus salarius	1155689	PRJEB18172	355439	FCB group	Bacteroidetes/Chlorobi group	2.53457	33.4	-	FQTW01	47	2329	2268	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444278	GCA_900129035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/035/GCA_900129035.1_IMG-taxon_2695420935_annotated_assembly	-	DSM 25661
Pseudopelagicola gijangensis	1470563	PRJEB18318	355774	Proteobacteria	Alphaproteobacteria	4.09457	54.9	-	FQZQ01	78	4002	3848	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444000	GCA_900142085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/085/GCA_900142085.1_IMG-taxon_2700988697_annotated_assembly	-	DSM 100564
Flavobacterium terrae	415425	PRJEB18314	355770	FCB group	Bacteroidetes/Chlorobi group	3.16126	31.8	-	FQZI01	19	2912	2848	12/2/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444363	GCA_900142035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/035/GCA_900142035.1_IMG-taxon_2695421047_annotated_assembly	-	DSM 18829
Alkalibacter saccharofermentans DSM 14828	1120975	PRJEB18158	355467	Terrabacteria group	Firmicutes	2.33136	40.3	-	FQTU01	35	2231	2144	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02746064	GCA_900128885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/885/GCA_900128885.1_IMG-taxon_2582581275_annotated_assembly	-	DSM 14828
Flavobacterium fluvii	468056	PRJEB18206	355510	FCB group	Bacteroidetes/Chlorobi group	4.12911	37	-	FQWB01	27	3466	3391	12/2/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443549	GCA_900129545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/545/GCA_900129545.1_IMG-taxon_2695420956_annotated_assembly	-	DSM 19978
Flavobacterium pectinovorum	29533	PRJNA354433	354433	FCB group	Bacteroidetes/Chlorobi group	5.60799	33.6	-	MUHB01	51	4698	4602	7/12/17	7/14/17	Scaffold	FDA	SAMN06049057	GCA_002217365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/365/GCA_002217365.1_ASM221736v1	-	ATCC 19366
Tissierella praeacuta DSM 18095	1123404	PRJEB18144	355478	Terrabacteria group	Firmicutes	3.11591	30.1	-	FQTY01	43	3109	2958	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745784	GCA_900128955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/955/GCA_900128955.1_IMG-taxon_2582581260_annotated_assembly	-	DSM 18095
Hymenobacter daecheongensis DSM 21074	1121955	PRJEB18287	355703	FCB group	Bacteroidetes/Chlorobi group	4.38575	61.2	-	FQYN01	18	3728	3627	12/2/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02745146	GCA_900141805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/805/GCA_900141805.1_IMG-taxon_2582581872_annotated_assembly	-	DSM 21074
Wenyingzhuangia marina	1195760	PRJEB18255	355519	FCB group	Bacteroidetes/Chlorobi group	3.24207	31.2	-	FQXQ01	11	2786	2716	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444281	GCA_900130035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/035/GCA_900130035.1_IMG-taxon_2695421042_annotated_assembly	-	DSM 100572
Desulfotomaculum australicum DSM 11792	1121425	PRJEB18181	355437	Terrabacteria group	Firmicutes	2.88164	54.6	-	FQUW01	77	2968	2797	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745218	GCA_900129285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/285/GCA_900129285.1_IMG-taxon_2582580749_annotated_assembly	-	DSM 11792
Flavobacterium micromati	229205	PRJEB18210	355494	FCB group	Bacteroidetes/Chlorobi group	3.69279	33.1	-	FQWF01	40	3199	3072	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444372	GCA_900129585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/585/GCA_900129585.1_IMG-taxon_2695420959_annotated_assembly	-	DSM 17659
Lutispora thermophila DSM 19022	1122184	PRJEB18320	355756	Terrabacteria group	Firmicutes	3.58303	35.7	-	FQZS01	63	3479	3268	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745176	GCA_900142105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/105/GCA_900142105.1_IMG-taxon_2585428153_annotated_assembly	-	DSM 19022
Leeuwenhoekiella marinoflava DSM 3653	1122159	PRJEB18152	355461	FCB group	Bacteroidetes/Chlorobi group	4.73342	37.5	-	FQUN01	44	4116	3951	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745246	GCA_900129005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/005/GCA_900129005.1_IMG-taxon_2582581269_annotated_assembly	-	DSM 3653
Streptomyces yunnanensis	156453	PRJEB18369	355807	Terrabacteria group	Actinobacteria	9.35615	71.4	-	FRBK01	94	8342	7817	12/2/16	3/14/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216268	GCA_900142595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/595/GCA_900142595.1_IMG-taxon_2667527450_annotated_assembly	-	CGMCC 4.3555
Asaccharospora irregularis DSM 2635	1121321	PRJEB18233	355536	Terrabacteria group	Firmicutes	2.6227	30.4	-	FQWX01	76	2567	2395	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488530	GCA_900129815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/815/GCA_900129815.1_IMG-taxon_2634166349_annotated_assembly	-	DSM 2635
Maribius salinus	313368	PRJEB18309	355718	Proteobacteria	Alphaproteobacteria	3.57442	67.7	-	FQZA01	30	3451	3314	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488012	GCA_900141995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/995/GCA_900141995.1_IMG-taxon_2619618996_annotated_assembly	-	DSM 26892
Thermoanaerobacter uzonensis DSM 18761	1123369	PRJEB18159	355468	Terrabacteria group	Firmicutes	2.40975	33.8	-	FQUR01	36	2489	2306	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745195	GCA_900129115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/115/GCA_900129115.1_IMG-taxon_2582581276_annotated_assembly	-	DSM 18761
Litoreibacter ascidiaceicola	1486859	PRJEB18185	355431	Proteobacteria	Alphaproteobacteria	3.74388	58.1	-	FQUV01	22	3673	3598	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444273	GCA_900129235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/235/GCA_900129235.1_IMG-taxon_2695420937_annotated_assembly	-	DSM 100566
Cruoricaptor ignavus	1118202	PRJEB18278	355711	FCB group	Bacteroidetes/Chlorobi group	2.22957	45.1	-	FQYI01	29	2191	2100	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443429	GCA_900141665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/665/GCA_900141665.1_IMG-taxon_2700988704_annotated_assembly	-	DSM 25479
Roseovarius marisflavi	1054996	PRJEB18372	355790	Proteobacteria	Alphaproteobacteria	4.08022	60.3	-	FRBN01	83	3985	3801	12/2/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444414	GCA_900142625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/625/GCA_900142625.1_IMG-taxon_2700988702_annotated_assembly	-	DSM 29327
Seinonella peptonophila	112248	PRJEB18187	355433	Terrabacteria group	Firmicutes	3.84444	39.2	-	FQVL01	41	3740	3597	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444392	GCA_900129355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/355/GCA_900129355.1_IMG-taxon_2695420940_annotated_assembly	-	DSM 44666
Desulfotomaculum putei DSM 12395	1121429	PRJEB18180	355436	Terrabacteria group	Firmicutes	3.11602	48.9	-	FQUY01	65	3164	2934	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745133	GCA_900129195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/195/GCA_900129195.1_IMG-taxon_2582580748_annotated_assembly	-	DSM 12395
Anaerosporobacter mobilis DSM 15930	1120996	PRJEB18405	355840	Terrabacteria group	Firmicutes	5.21777	34.9	-	FRCP01	45	4581	4445	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02746066	GCA_900142955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/955/GCA_900142955.1_IMG-taxon_2588253509_annotated_assembly	-	DSM 15930
Tessaracoccus bendigoensis DSM 12906	1123357	PRJEB18300	355719	Terrabacteria group	Actinobacteria	4.13143	66.7	-	FQZG01	158	3720	3507	12/2/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02745244	GCA_900141915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/915/GCA_900141915.1_IMG-taxon_2585427598_annotated_assembly	-	DSM 12906
Hespellia stercorisuis DSM 15480	1121950	PRJEB18326	355762	Terrabacteria group	Firmicutes	4.40294	45.3	-	FQZY01	160	4145	3890	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745243	GCA_900142165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/165/GCA_900142165.1_IMG-taxon_2585428171_annotated_assembly	-	DSM 15480
Actinomyces denticolens	52767	PRJDB5146	369780	Terrabacteria group	Actinobacteria	2.90486	71.2	-	BDIO01	8	2456	2106	2/2/17	4/17/17	Contig	"NODAI Genome Research Center, Tokyo University of Agriculture"	SAMD00059584	GCA_001995055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/055/GCA_001995055.1_ASM199505v1	-	DSM 20671
Flavobacterium fontis	1124188	PRJEB18192	355427	FCB group	Bacteroidetes/Chlorobi group	3.08463	41	-	FQVQ01	36	2757	2687	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444377	GCA_900129405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/405/GCA_900129405.1_IMG-taxon_2695420946_annotated_assembly	-	DSM 25660
Atopostipes suicloacalis DSM 15692	1121025	PRJEB18156	355465	Terrabacteria group	Firmicutes	2.12434	35.3	-	FQUF01	51	2011	1882	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745249	GCA_900129085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/085/GCA_900129085.1_IMG-taxon_2582581273_annotated_assembly	-	DSM 15692
Gracilibacillus kekensis	1027249	PRJEB18418	355832	Terrabacteria group	Firmicutes	3.98176	36	-	FRCZ01	13	3778	3637	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216179	GCA_900143085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/085/GCA_900143085.1_IMG-taxon_2667528169_annotated_assembly	-	CGMCC 1.10681
Flavobacterium defluvii	370979	PRJEB18207	355511	FCB group	Bacteroidetes/Chlorobi group	4.87162	33.7	-	FQWC01	23	4225	4114	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05443663	GCA_900129555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/555/GCA_900129555.1_IMG-taxon_2695420958_annotated_assembly	-	DSM 17963
Flavobacterium xinjiangense	178356	PRJEB18398	355734	FCB group	Bacteroidetes/Chlorobi group	3.90281	34.1	-	FRCL01	33	3421	3291	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216269	GCA_900142885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/885/GCA_900142885.1_IMG-taxon_2663762760_annotated_assembly	-	CGMCC 1.2749
Aquimarina spongiae	570521	PRJEB18291	355696	FCB group	Bacteroidetes/Chlorobi group	5.34532	35.9	-	FQYP01	28	4686	4597	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488508	GCA_900141785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/785/GCA_900141785.1_IMG-taxon_2622736502_annotated_assembly	-	DSM 22623
Bacteroides luti	1297750	PRJEB18170	355447	FCB group	Bacteroidetes/Chlorobi group	4.11875	36.8	-	FQTV01	38	3229	3129	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444405	GCA_900128905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/905/GCA_900128905.1_IMG-taxon_2695420932_annotated_assembly	-	DSM 26991
Pseudomonas zeshuii	1076620	PRJEB18301	355720	Proteobacteria	Gammaproteobacteria	5.33983	55.3	-	FQYS01	33	4978	4777	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216295	GCA_900141925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/925/GCA_900141925.1_IMG-taxon_2663762797_annotated_assembly	-	KACC 15471
Lampropedia hyalina DSM 16112	1122156	PRJEB18149	355483	Proteobacteria	Betaproteobacteria	3.18447	61.5	-	FQUZ01	58	2795	2646	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745117	GCA_900129055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/055/GCA_900129055.1_IMG-taxon_2582581266_annotated_assembly	-	DSM 16112
Wenxinia saemankumensis	1447782	PRJEB18283	355699	Proteobacteria	Alphaproteobacteria	3.57758	71.2	-	FQYO01	17	3429	3338	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444417	GCA_900141735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/735/GCA_900141735.1_IMG-taxon_2695421046_annotated_assembly	-	DSM 100565
Archangium sp. Cb G35	1920190	PRJNA353849	353849	Proteobacteria	delta/epsilon subdivisions	12.9276	68.8	-	MPOI01	41	10388	10058	12/9/16	4/17/17	Contig	University of Mississippi	SAMN06020410	GCA_001896145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/145/GCA_001896145.1_ASM189614v1	-	Cb G35
Streptomyces phaeoluteigriseus	114686	PRJNA352930	352930	Terrabacteria group	Actinobacteria	8.64349	71.4	-	MPOH02	81	7807	6268	12/9/16	8/4/17	Scaffold	University of Strathclyde	SAMN06007048	GCA_001896135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/135/GCA_001896135.2_ASM189613v2	-	DSM 41896
Candidatus Micrarchaeum sp. AZ1	1531428	PRJNA257436	257436	DPANN group	Candidatus Micrarchaeota	0.980507	45.8	-	JPUK01	5	881	840	12/9/16	12/9/16	Contig	Center for Genomic Sciences	SAMN02951672	GCA_001896515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/515/GCA_001896515.1_ASM189651v1	-	-
Deltaproteobacteria bacterium Phox-21	1918507	PRJNA315143	315143	Proteobacteria	delta/epsilon subdivisions	3.31442	57.7	-	MPOS01	63	-	-	12/9/16	12/9/16	Contig	UC Berkeley	SAMN06018735	GCA_001896555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/555/GCA_001896555.1_ASM189655v1	-	-
bacterium EBM-40	1918508	PRJNA315143	315143	unclassified Bacteria	unclassified Bacteria (miscellaneous)	2.88127	56.2	-	MPOU01	38	-	-	12/9/16	12/9/16	Contig	UC Berkeley	SAMN06018848	GCA_001896565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/565/GCA_001896565.1_ASM189656v1	-	-
Thermotogales bacterium EBM-48	1918506	PRJNA315143	315143	Thermotogae	Thermotogae	3.31212	45.8	-	MPPD01	328	-	-	12/9/16	12/9/16	Contig	UC Berkeley	SAMN06019124	GCA_001896625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/625/GCA_001896625.1_ASM189662v1	-	-
Coprothermobacter sp. EBM-25	1918500	PRJNA315143	315143	Terrabacteria group	Firmicutes	2.03407	47	-	MPOZ01	369	-	-	12/9/16	12/9/16	Contig	UC Berkeley	SAMN06019007	GCA_001896705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/705/GCA_001896705.1_ASM189670v1	-	-
Methanococcoides sp. EBM-47	1918501	PRJNA315143	315143	Euryarchaeota	Methanomicrobia	2.18176	42.3	-	MPPA01	53	-	-	12/9/16	12/9/16	Contig	UC Berkeley	SAMN06019024	GCA_001896725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/725/GCA_001896725.1_ASM189672v1	-	-
Thermotogales bacterium EBM-19	1918505	PRJNA315143	315143	Thermotogae	Thermotogae	2.38245	48.7	-	MPOW01	424	-	-	12/9/16	12/9/16	Contig	UC Berkeley	SAMN06018893	GCA_001896785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/785/GCA_001896785.1_ASM189678v1	-	-
Thermomonospora sp. CIF 1	1916083	PRJNA336324	336324	Terrabacteria group	Actinobacteria	5.45791	71.9	-	MOYN01	181	-	-	12/9/16	12/9/16	Contig	UNESP/FCAV	SAMN05930353	GCA_001896795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/795/GCA_001896795.1_ASM189679v1	-	-
Alphaproteobacteria bacterium 65-7	1895712	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	2.12534	63.6	-	MKRE01	191	2334	1431	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660495	GCA_001896805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/805/GCA_001896805.1_ASM189680v1	-	-
Rhizobiales bacterium 65-79	1895815	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	5.13288	64.6	-	MKRJ01	54	4916	4788	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660500	GCA_001896885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/885/GCA_001896885.1_ASM189688v1	-	-
Caulobacterales bacterium 68-7	1895737	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	3.31827	67.3	-	MKRI01	208	3456	2648	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660499	GCA_001896875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/875/GCA_001896875.1_ASM189687v1	-	-
Alphaproteobacteria bacterium 64-11	1895709	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	2.94312	64.3	-	MKRH01	213	2906	2621	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660498	GCA_001896865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/865/GCA_001896865.1_ASM189686v1	-	-
Clostridiales bacterium 43-6	1895747	PRJNA279279	279279	Terrabacteria group	Firmicutes	3.08836	42.7	-	MKRK01	263	3162	2256	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660501	GCA_001896915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/915/GCA_001896915.1_ASM189691v1	-	-
Alphaproteobacteria bacterium 64-6	1895710	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	3.96309	61.9	-	MKRL01	408	4155	2637	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660502	GCA_001896945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/945/GCA_001896945.1_ASM189694v1	-	-
Sphingobacteriales bacterium 41-5	1895836	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	3.13341	40.7	-	MKRO01	245	3070	2269	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660505	GCA_001896965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/965/GCA_001896965.1_ASM189696v1	-	-
Rhizobiales bacterium 68-8	1895817	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	4.87415	67.6	-	MKRQ01	197	5008	3903	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660507	GCA_001897005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/005/GCA_001897005.1_ASM189700v1	-	-
Bacteroidales bacterium 45-6	1895719	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	3.81815	45	-	MKRS01	899	3383	2663	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660509	GCA_001897035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/035/GCA_001897035.1_ASM189703v1	-	-
Rhizobiales bacterium 63-7	1895813	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	6.07514	62.5	-	MKSB01	280	6095	4877	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660518	GCA_001897115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/115/GCA_001897115.1_ASM189711v1	-	-
Bacteroidetes bacterium 47-18	1895926	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	3.86692	47.2	-	MKSF01	39	3324	3218	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660522	GCA_001897155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/155/GCA_001897155.1_ASM189715v1	-	-
Chlamydiales bacterium 38-26	1895743	PRJNA279279	279279	PVC group	Chlamydiae	2.83411	38.1	-	MKSK01	8	2394	2327	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660527	GCA_001897225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/225/GCA_001897225.1_ASM189722v1	-	-
Burkholderiales bacterium 66-5	1895728	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	3.17098	65.6	-	MKSJ01	315	3217	2779	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660526	GCA_001897215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/215/GCA_001897215.1_ASM189721v1	-	-
Verrucomicrobia bacterium 61-8	1895866	PRJNA279279	279279	PVC group	Verrucomicrobia	5.05863	60.6	-	MKSI01	407	4824	4235	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660525	GCA_001897195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/195/GCA_001897195.1_ASM189719v1	-	-
Candidatus Saccharibacteria bacterium 49-20	1895829	PRJNA279279	279279	unclassified Bacteria	Bacteria candidate phyla	0.904897	49.5	-	MKSN01	1	952	904	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660530	GCA_001897295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/295/GCA_001897295.1_ASM189729v1	-	-
Candidatus Saccharibacteria bacterium 47-87	1895828	PRJNA279279	279279	unclassified Bacteria	Bacteria candidate phyla	0.900471	46.6	-	MKSO01	1	940	890	12/9/16	12/9/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN05660531	GCA_001897305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/305/GCA_001897305.1_ASM189730v1	-	-
Solirubrobacterales bacterium 67-14	1895832	PRJNA279279	279279	Terrabacteria group	Actinobacteria	3.23284	66.5	-	MKST01	12	3013	2885	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660536	GCA_001897355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/355/GCA_001897355.1_ASM189735v1	-	-
Actinobacteria bacterium 69-20	1895696	PRJNA279279	279279	Terrabacteria group	Actinobacteria	4.4755	68.6	-	MKSW01	43	4185	4045	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660539	GCA_001897425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/425/GCA_001897425.1_ASM189742v1	-	-
Acidobacteriales bacterium 59-55	1895690	PRJNA279279	279279	Acidobacteria	Acidobacteriia	4.92349	58.9	-	MKSV01	12	4134	4037	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660538	GCA_001897435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/435/GCA_001897435.1_ASM189743v1	-	-
Alphaproteobacteria bacterium 33-17	1895704	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	1.88302	33.1	-	MKSX01	30	1705	1643	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660540	GCA_001897445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/445/GCA_001897445.1_ASM189744v1	-	-
Alphaproteobacteria bacterium 43-37	1895707	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	1.55975	43.4	-	MKSY01	35	1502	1422	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660541	GCA_001897475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/475/GCA_001897475.1_ASM189747v1	-	-
Bacteroidetes bacterium 41-46	1895922	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	2.46884	41.1	-	MKTA01	34	2314	2239	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660543	GCA_001897515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/515/GCA_001897515.1_ASM189751v1	-	-
Bacteroidales bacterium 36-12	1895718	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	3.91674	35.6	-	MKSZ01	156	3234	3025	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660542	GCA_001897505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/505/GCA_001897505.1_ASM189750v1	-	-
Bacteroidetes bacterium 43-16	1895923	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	4.72732	43	-	MKTB01	39	4163	4066	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660544	GCA_001897525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/525/GCA_001897525.1_ASM189752v1	-	-
Bacteroidetes bacterium 37-13	1895921	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	3.12362	37	-	MKTC01	43	2663	2570	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660545	GCA_001897535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/535/GCA_001897535.1_ASM189753v1	-	-
Clostridiales bacterium 38-18	1895746	PRJNA279279	279279	Terrabacteria group	Firmicutes	3.41738	37.6	-	MKTL01	30	3192	3125	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660554	GCA_001897605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/605/GCA_001897605.1_ASM189760v1	-	-
Burkholderiales bacterium 64-34	1895726	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	5.77328	64.4	-	MKTF01	97	5257	5112	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660548	GCA_001897585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/585/GCA_001897585.1_ASM189758v1	-	-
Bacteroidia bacterium 44-10	1895721	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	5.737	43.6	-	MKTE01	99	4574	4208	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660547	GCA_001897595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/595/GCA_001897595.1_ASM189759v1	-	-
Burkholderiales bacterium 68-10	1895730	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	3.64309	68.1	-	MKTG01	116	3504	3036	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660549	GCA_001897615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/615/GCA_001897615.1_ASM189761v1	-	-
Alphaproteobacteria bacterium 41-28	1895706	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	2.85964	40.6	-	MKUL01	75	2638	2526	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660580	GCA_001897795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/795/GCA_001897795.1_ASM189779v1	-	-
Candidatus Amoebophilus sp. 36-38	1895716	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	1.76282	36.2	-	MKUM01	106	1262	1162	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660581	GCA_001897825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/825/GCA_001897825.1_ASM189782v1	-	-
Burkholderiales bacterium 68-12	1896170	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	3.76599	68.3	-	MKUS01	72	3474	3349	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660587	GCA_001897845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/845/GCA_001897845.1_ASM189784v1	-	-
Bacteroidetes bacterium 46-16	1895925	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	4.35759	45.6	-	MKUN01	53	4000	3892	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660582	GCA_001897835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/835/GCA_001897835.1_ASM189783v1	-	-
Bacteroidetes bacterium 43-93	1895924	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	3.99136	42.9	-	MKUO01	27	3716	3642	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660583	GCA_001897855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/855/GCA_001897855.1_ASM189785v1	-	-
Alphaproteobacteria bacterium 65-37	1895711	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	7.14939	65.7	-	MKRV01	319	6803	6461	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660512	GCA_001897995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/995/GCA_001897995.1_ASM189799v1	-	-
Armatimonadetes bacterium 55-13	1895717	PRJNA279279	279279	Terrabacteria group	Armatimonadetes	4.52548	55.4	-	MKRX01	27	4284	4149	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660514	GCA_001898035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/035/GCA_001898035.1_ASM189803v1	-	-
Alphaproteobacteria bacterium 62-8	1895708	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	2.68986	60.5	-	MKRW01	202	2867	2127	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660513	GCA_001898015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/015/GCA_001898015.1_ASM189801v1	-	-
Alphaproteobacteria bacterium 40-19	1895705	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	0.988388	39.8	-	MKSD01	1	1011	947	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660520	GCA_001898075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/075/GCA_001898075.1_ASM189807v1	-	-
Solirubrobacterales bacterium 70-9	1895833	PRJNA279279	279279	Terrabacteria group	Actinobacteria	4.20776	68.8	-	MKSH01	278	4380	3408	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660524	GCA_001898095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/095/GCA_001898095.1_ASM189809v1	-	-
Bacteroidia bacterium 43-41	1895720	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	3.60543	43.1	-	MKTD01	80	3035	2942	12/9/16	12/9/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN05660546	GCA_001898165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/165/GCA_001898165.1_ASM189816v1	-	-
Gammaproteobacteria bacterium 39-13	1895767	PRJNA279279	279279	Proteobacteria	Gammaproteobacteria	3.59463	38.6	-	MKTN01	71	3231	3129	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660556	GCA_001898235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/235/GCA_001898235.1_ASM189823v1	-	-
Chloroflexi bacterium 54-19	1895928	PRJNA279279	279279	Terrabacteria group	Chloroflexi	9.24944	53.7	-	MKTJ01	93	7497	7272	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660552	GCA_001898225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/225/GCA_001898225.1_ASM189822v1	-	-
Planctomycetales bacterium 71-10	1895807	PRJNA279279	279279	PVC group	Planctomycetes	7.7315	70.5	-	MKTT01	158	6289	6015	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660562	GCA_001898385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/385/GCA_001898385.1_ASM189838v1	-	-
Rhodospirillales bacterium 69-11	1895825	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	6.48396	68.9	-	MKTV01	124	5676	5253	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660564	GCA_001898425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/425/GCA_001898425.1_ASM189842v1	-	-
Sphingobacteriales bacterium 44-61	1895838	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	5.58223	44.1	-	MKTW01	20	4749	4660	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660565	GCA_001898405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/405/GCA_001898405.1_ASM189840v1	-	-
Sphingobacteriales bacterium 39-19	1895834	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	3.32002	39.2	-	MKTX01	18	2942	2870	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660566	GCA_001898465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/465/GCA_001898465.1_ASM189846v1	-	-
Sphingobacteriales bacterium 48-107	1895840	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	4.83905	47.8	-	MKUA01	28	4133	4049	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660569	GCA_001898495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/495/GCA_001898495.1_ASM189849v1	-	-
Sphingobacteriales bacterium 50-39	1895841	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	7.89846	50.3	-	MKTZ01	27	6576	6440	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660568	GCA_001898505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/505/GCA_001898505.1_ASM189850v1	-	-
Sphingobacteriales bacterium 46-32	1895839	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	5.48736	46.1	-	MKTY01	27	4694	4626	12/9/16	12/9/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN05660567	GCA_001898485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/485/GCA_001898485.1_ASM189848v1	-	-
Sphingomonadales bacterium 63-6	1895846	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	3.51244	62.4	-	MKUB01	210	3429	3106	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660570	GCA_001898545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/545/GCA_001898545.1_ASM189854v1	-	-
Spirosoma sp. 209	1955701	PRJNA373991	373991	FCB group	Bacteroidetes/Chlorobi group	6.79763	55.6	-	MVEC01	42	5601	5480	2/24/17	2/27/17	Contig	SUNY Cortland	SAMN06319294	GCA_002006735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/735/GCA_002006735.1_ASM200673v1	-	209
Micrococcales bacterium 72-143	1895790	PRJNA279279	279279	Terrabacteria group	Actinobacteria	3.33048	71.6	-	MKVM01	6	3126	3047	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660607	GCA_001898835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/835/GCA_001898835.1_ASM189883v1	-	-
Micrococcales bacterium 73-13	1895791	PRJNA279279	279279	Terrabacteria group	Actinobacteria	2.40439	72.5	-	MKVN01	48	2354	2218	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660608	GCA_001898855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/855/GCA_001898855.1_ASM189885v1	-	-
Micrococcales bacterium 73-15	1895792	PRJNA279279	279279	Terrabacteria group	Actinobacteria	3.81835	73.2	-	MKVO01	16	3328	3102	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660609	GCA_001898885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/885/GCA_001898885.1_ASM189888v1	-	-
Micrococcales bacterium 70-64	1895789	PRJNA279279	279279	Terrabacteria group	Actinobacteria	3.12181	70.4	-	MKVP01	1	3142	3068	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660610	GCA_001898905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/905/GCA_001898905.1_ASM189890v1	-	-
Rhizobiales bacterium 62-17	1895810	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	5.66238	61.6	-	MKVW01	9	5340	5228	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660617	GCA_001898965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/965/GCA_001898965.1_ASM189896v1	-	-
Rhodobacterales bacterium 65-51	1895824	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	4.67967	64.6	-	MKWD01	62	4608	4470	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660624	GCA_001898985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/985/GCA_001898985.1_ASM189898v1	-	-
Rhizobiales bacterium 63-22	1895812	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	4.14337	62.6	-	MKVZ01	20	3865	3742	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660620	GCA_001898995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/995/GCA_001898995.1_ASM189899v1	-	-
Chloroflexi bacterium 44-23	1895927	PRJNA279279	279279	Terrabacteria group	Chloroflexi	4.18444	44.4	-	MKUW01	28	3643	3568	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660591	GCA_001899005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/005/GCA_001899005.1_ASM189900v1	-	-
Flavobacteriia bacterium 40-80	1895763	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	3.52115	39.6	-	MKVF01	32	3096	3026	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660600	GCA_001899145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/145/GCA_001899145.1_ASM189914v1	-	-
Candidatus Kapabacteria sp. 59-99	1895771	PRJNA279279	279279	unclassified Bacteria	Candidatus Kapabacteria	3.27299	59.4	-	MKVH01	28	2727	2656	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660602	GCA_001899175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/175/GCA_001899175.1_ASM189917v1	-	-
Rhizobiales bacterium 62-47	1895811	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	4.91603	61.9	-	MKVX01	23	4585	4486	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660618	GCA_001899255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/255/GCA_001899255.1_ASM189925v1	-	-
Rhizobiales bacterium 64-17	1895814	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	4.62726	64.1	-	MKWA01	26	4395	4266	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660621	GCA_001899285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/285/GCA_001899285.1_ASM189928v1	-	-
Candidatus Obscuribacter phosphatis	1906157	PRJNA347481	347481	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.49465	49.2	-	MOYA01	8	-	-	12/9/16	12/9/16	Scaffold	University of Queensland	SAMN05890506	GCA_001899315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/315/GCA_001899315.1_ASM189931v1	24709563	-
Candidatus Gastranaerophilus phascolarctosicola	1906137	PRJNA347484	347484	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.81827	38.5	-	MOYE01	14	-	-	12/9/16	12/9/16	Scaffold	University of Queensland	SAMN05890510	GCA_001899335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/335/GCA_001899335.1_ASM189933v1	24709563	-
Candidatus Gastranaerophilales bacterium Zag_1	1906169	PRJNA347484	347484	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.98972	34.9	-	MOYC01	322	-	-	12/9/16	12/9/16	Scaffold	University of Queensland	SAMN05890512	GCA_001899365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/365/GCA_001899365.1_ASM189936v1	24709563	-
Candidatus Caenarcanum bioreactoricola	1906166	PRJNA347483	347483	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.84122	26.1	-	MOYB01	67	-	-	12/9/16	12/9/16	Scaffold	University of Queensland	SAMN05890507	GCA_001899385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/385/GCA_001899385.1_ASM189938v1	24709563	-
Candidatus Gastranaerophilales bacterium Zag_111	1906167	PRJNA347484	347484	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.20512	36.7	-	MOYD01	65	-	-	12/9/16	12/9/16	Scaffold	University of Queensland	SAMN05890511	GCA_001899395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/395/GCA_001899395.1_ASM189939v1	24709563	-
Candidatus Gastranaerophilales bacterium MH_37	1906168	PRJNA347487	347487	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.19728	34.1	-	MOYF01	157	-	-	12/9/16	12/9/16	Scaffold	University of Queensland	SAMN05890514	GCA_001899425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/425/GCA_001899425.1_ASM189942v1	24709563	-
Candidatus Desulfopertinax cowenii	1919273	PRJNA269163	269163	Terrabacteria group	Firmicutes	1.77873	61.2	-	MPOA01	6	-	-	12/9/16	5/15/17	Contig	University of Hawaii	SAMN06016028	GCA_001899445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/445/GCA_001899445.1_ASM189944v1	28396823	-
Rhizobiales bacterium 65-9	1895816	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	4.44998	65.2	-	MKVY01	54	4331	3924	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660619	GCA_001899525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/525/GCA_001899525.1_ASM189952v1	-	-
Rhodospirillales bacterium 70-18	1895826	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	5.0522	70	-	MKWE01	57	4584	4448	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660625	GCA_001899585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/585/GCA_001899585.1_ASM189958v1	-	-
Sphingobacteriales bacterium 40-81	1895835	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	6.13949	40.1	-	MKWF01	79	5116	4972	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660626	GCA_001899605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/605/GCA_001899605.1_ASM189960v1	-	-
Myxococcales bacterium 68-20	1895795	PRJNA279279	279279	Proteobacteria	delta/epsilon subdivisions	11.8925	68.4	-	MKVQ01	52	10029	9818	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660611	GCA_001899635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/635/GCA_001899635.1_ASM189963v1	-	-
Sphingobacteriales bacterium 44-15	1895837	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	6.00614	44	-	MKWG01	46	4888	4767	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660627	GCA_001899685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/685/GCA_001899685.1_ASM189968v1	-	-
Xanthomonadales bacterium 66-474	1895868	PRJNA279279	279279	Proteobacteria	Gammaproteobacteria	3.72879	65.6	-	MKWP01	16	3299	3202	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660636	GCA_001899805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/805/GCA_001899805.1_ASM189980v1	-	-
Xanthomonadales bacterium 69-70	1895869	PRJNA279279	279279	Proteobacteria	Gammaproteobacteria	5.81093	68.5	-	MKWQ01	31	4763	4650	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660637	GCA_001899845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/845/GCA_001899845.1_ASM189984v1	-	-
Xanthomonadales bacterium 63-13	1895867	PRJNA279279	279279	Proteobacteria	Gammaproteobacteria	3.74771	63.4	-	MKWR01	36	3282	3194	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660638	GCA_001899855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/855/GCA_001899855.1_ASM189985v1	-	-
Jeotgalicoccus saudimassiliensis	1461582	PRJEB5506	245001	Terrabacteria group	Firmicutes	2.19106	42.6	chromosome:NZ_CCSE01000001.1/CCSE01000001.1	CCSE01	1	2203	2120	9/5/14	4/9/17	Chromosome	URMITE	SAMEA2659318	GCA_000756715.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/715/GCA_000756715.2_PRJEB5505_assembly_1	-	13MG44_air
Pseudomonas saudiphocaensis	1499686	PRJEB6478	251854	Proteobacteria	Gammaproteobacteria	3.67376	61.2	chromosome:NZ_CCSF01000001.1/CCSF01000001.1	CCSF01	1	3454	3347	9/6/14	4/9/17	Chromosome	URMITE	SAMEA2658259	GCA_000756775.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/775/GCA_000756775.2_PRJEB6478_assembly_1	-	20_BN
Bifidobacterium dentium Bd1	401473	PRJNA17583	17583	Terrabacteria group	Actinobacteria	2.63637	58.5	chromosome:NC_013714.1/CP001750.1	-	1	2239	2137	1/5/10	3/30/17	Complete Genome	"Department of Genetics, Anthropology and Evolution, University of Parma, Parma, Italy"	SAMN02603177	GCA_000024445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/445/GCA_000024445.1_ASM2444v1	20041198	Bd1
Paenibacillus phocaensis	1776378	PRJEB12554	310082	Terrabacteria group	Firmicutes	5.51511	53.5	-	FCOQ01	39	4952	4756	1/30/16	8/19/16	Contig	URMITE	SAMEA3858979	GCA_900021165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/165/GCA_900021165.1_Paenibacillus_phoceensis	-	mt24
Rufibacter ruber	1783499	PRJNA309044	309044	FCB group	Bacteroidetes/Chlorobi group	5.50231	51.5	-	LRMM01	166	4505	4296	5/2/16	4/12/17	Contig	Masaryk University	SAMN04419562	GCA_001647275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/275/GCA_001647275.1_ASM164727v1	27488543	CCM 8646
Fusobacterium massiliense	1852365	PRJEB15286	341769	Fusobacteria	Fusobacteriia	1.80917	27.3	-	FMJA01	6	1695	1590	9/7/16	4/13/17	Scaffold	URMITE	SAMEA4413213	GCA_900095705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/705/GCA_900095705.1_PRJEB15286	-	Marseille-P2749
Synechococcus sp. JA-2-3B'a(2-13)	321332	PRJNA16252	16252	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.04668	58.5	chromosome:NC_007776.1/CP000240.1	-	1	2809	2692	2/6/06	4/17/17	Complete Genome	TIGR	SAMN02604049	GCA_000013225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/225/GCA_000013225.1_ASM1322v1	"1,639,109,018,059,490"	JA-2-3B'a(2-13)
Methylococcales bacterium OPU3_GD_OMZ	1920888	PRJNA328797	328797	Proteobacteria	Gammaproteobacteria	2.10686	42.1	-	MPSY01	304	-	-	12/9/16	12/12/16	Scaffold	Georgia Institute of Technology	SAMN06045994	GCA_001901525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/525/GCA_001901525.1_010_bin_OPU3_Golfo_Dulce	-	-
Mycobacterium malmesburyense	1566886	PRJEB9485	285976	Terrabacteria group	Actinobacteria	5.47096	67.3	-	CVTB01	324	5295	5040	6/8/15	8/1/17	Scaffold	Centre for Proteomic and Genomic Research	SAMEA3432686	GCA_001050015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/015/GCA_001050015.1_Mycobacterium_malmesburii_WCM_7299	-	WCM 7299
Lysinibacillus saudimassiliensis	1461583	PRJEB5506	245001	Terrabacteria group	Firmicutes	2.59176	40.2	-	-	11	2769	2610	-	-	Scaffold	URMITE	SAMEA2659287	GCA_000935965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/965/GCA_000935965.1_PRJEB5506_assembly_1	-	13S34_air
Prevotella phocaeensis	1776388	PRJEB12698	311692	FCB group	Bacteroidetes/Chlorobi group	2.92212	44.6	-	FIZG01	12	2408	2262	2/12/16	4/12/17	Scaffold	URMITE	SAMEA3869493	GCA_900065875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/875/GCA_900065875.1_PRJEB126981	-	SN19
Tidjanibacter massiliensis	1871003	PRJEB16355	349287	FCB group	Bacteroidetes/Chlorobi group	2.3903	56.1	-	FNWB01	8	2049	1955	10/27/16	4/13/17	Scaffold	URMITE	SAMEA4519289	GCA_900104605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/605/GCA_900104605.1_PRJEB16355	-	Marseille-P3084
Traorella massiliensis	1903263	PRJEB16357	349285	Terrabacteria group	Firmicutes	2.60609	36	-	FNLJ01	9	2617	2499	10/27/16	4/13/17	Scaffold	URMITE	SAMEA4519295	GCA_900104665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/665/GCA_900104665.1_PRJEB16357	-	Marseille-P3110
Hydrococcus rivularis NIES-593	1921803	PRJNA347433	347433	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.14832	45	-	MRCB01	68	4611	4382	12/14/16	4/16/17	Scaffold	"Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences"	SAMN05890686	GCA_001904635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/635/GCA_001904635.1_ASM190463v1	-	NIES-593
Fischerella major NIES-592	210994	PRJNA347433	347433	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.6395	41	-	MRCA01	34	4781	4506	12/14/16	4/17/17	Scaffold	"Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences"	SAMN05890685	GCA_001904645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/645/GCA_001904645.1_ASM190464v1	-	NIES-592
Chroogloeocystis siderophila 5.2 s.c.1	247279	PRJNA347433	347433	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.00999	42.9	-	MRCC01	43	4558	4219	12/14/16	4/17/17	Contig	"Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences"	SAMN05890687	GCA_001904655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/655/GCA_001904655.1_ASM190465v1	-	5.2 s.c.1
Nostoc calcicola FACHB-389	1357508	PRJNA347433	347433	Terrabacteria group	Cyanobacteria/Melainabacteria group	9.04921	41.5	-	MRBZ01	320	7369	6956	12/14/16	4/17/17	Scaffold	"Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences"	SAMN05890684	GCA_001904715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/715/GCA_001904715.1_ASM190471v1	-	FACHB-389
Phormidium ambiguum IAM M-71	454136	PRJNA347433	347433	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.4105	39.5	-	MRCE01	90	6396	6167	12/14/16	4/17/17	Scaffold	"Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences"	SAMN05890689	GCA_001904725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/725/GCA_001904725.1_ASM190472v1	-	IAM M-71
Phormidium tenue NIES-30	549789	PRJNA347433	347433	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.82189	56	-	MRCG01	44	5152	4997	12/14/16	4/17/17	Scaffold	"Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences"	SAMN05890691	GCA_001904775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/775/GCA_001904775.1_ASM190477v1	-	NIES-30
Vibrio quintilis	1117707	PRJEB17788	357219	Proteobacteria	Gammaproteobacteria	5.71282	45.8	-	FRFG01	128	5266	5006	12/12/16	4/16/17	Contig	UVEG	SAMEA18850168	GCA_900143745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/745/GCA_900143745.1_V.quintilis_CECT7734T_Velvet_Prokka_EMBL	-	-
Flavobacterium cucumis	416016	PRJEB18444	356024	FCB group	Bacteroidetes/Chlorobi group	2.85448	33.1	-	FRYK01	13	2687	2620	12/10/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443547	GCA_900148835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/835/GCA_900148835.1_IMG-taxon_2698536819_annotated_assembly	-	DSM 18830
Anaerocolumna xylanovorans DSM 12503	1121345	PRJEB18518	356530	Terrabacteria group	Firmicutes	5.42033	40.2	-	FRFD01	23	4697	4587	12/9/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745217	GCA_900143645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/645/GCA_900143645.1_IMG-taxon_2582580727_annotated_assembly	-	DSM 12503
Desulfopila aestuarii DSM 18488	1121416	PRJEB18519	356531	Proteobacteria	delta/epsilon subdivisions	6.06558	49.6	-	FRFE01	103	5269	5073	12/9/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02745220	GCA_900143695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/695/GCA_900143695.1_IMG-taxon_2582581262_annotated_assembly	-	DSM 18488
Pseudoxanthobacter soli DSM 19599	1123029	PRJEB18531	356706	Proteobacteria	Alphaproteobacteria	5.16524	67.8	-	FRXO01	27	4424	4272	12/9/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745172	GCA_900148505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/505/GCA_900148505.1_IMG-taxon_2585428043_annotated_assembly	-	DSM 19599
Algoriphagus zhangzhouensis	1073327	PRJEB18532	356707	FCB group	Bacteroidetes/Chlorobi group	4.80215	39.3	-	FRXN01	15	4076	4004	12/9/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488108	GCA_900148515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/515/GCA_900148515.1_IMG-taxon_2617270825_annotated_assembly	-	DSM 25035
Streptomyces uncialis	1048205	PRJNA286672	286672	Terrabacteria group	Actinobacteria	8.8835	72.1	-	LFBV01	16	7509	7157	12/15/16	3/14/17	Scaffold	The Scripps Research Institute	SAMN03769207	GCA_001905345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/345/GCA_001905345.1_ASM190534v1	-	DCA2648
Candidatus Thiosymbion oneisti	589554	PRJEB14785	339807	Proteobacteria	Gammaproteobacteria	4.44024	58.7	-	FLUZ01	2026	-	-	8/25/16	8/25/16	Contig	MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY	SAMEA4075897	GCA_900092645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/645/GCA_900092645.1_1385ASp362k77FG	-	-
Urinacoccus massiliensis	1723382	PRJEB18034	354759	Terrabacteria group	Firmicutes	2.08716	41.7	-	FPLH01	13	2031	1894	11/23/16	8/10/17	Scaffold	URMITE	SAMEA4555319	GCA_900120405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/405/GCA_900120405.1_PRJEB18034	-	FC2
Massiliomicrobiota timonensis	1776392	PRJEB18026	354767	Terrabacteria group	Firmicutes	1.53449	43.4	-	FQLU01	2	1416	1335	11/23/16	4/14/17	Contig	URMITE	SAMEA4555316	GCA_900120365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/365/GCA_900120365.1_PRJEB18026	-	SN16
Desulfotomaculum thermosubterraneum DSM 16057	1121432	PRJEB18313	355769	Terrabacteria group	Firmicutes	3.41317	54.9	-	FQZM01	98	3483	3262	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745219	GCA_900142025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/025/GCA_900142025.1_IMG-taxon_2585428086_annotated_assembly	-	DSM 16057
Flavobacterium frigidimaris	262320	PRJNA354433	354433	FCB group	Bacteroidetes/Chlorobi group	5.42218	34	-	MUGV01	71	4607	4474	7/12/17	7/14/17	Scaffold	FDA	SAMN06049050	GCA_002217275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/275/GCA_002217275.1_ASM221727v1	-	DSM 15937
Burkholderiales bacterium 67-32	1895729	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	6.66388	67.2	-	MKUP01	34	6253	6134	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660584	GCA_001898625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/625/GCA_001898625.1_ASM189862v1	-	-
Burkholderiales bacterium 70-64	1895733	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	4.72151	69.8	-	MKUQ01	63	4362	4230	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660585	GCA_001898645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/645/GCA_001898645.1_ASM189864v1	-	-
Burkholderiales bacterium 66-26	1895727	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	3.51124	66.4	-	MKUR01	45	3295	3200	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660586	GCA_001898655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/655/GCA_001898655.1_ASM189865v1	-	-
Burkholderiales bacterium 68-20	1895732	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	4.50524	68.1	-	MKUT01	305	4100	3772	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660588	GCA_001898665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/665/GCA_001898665.1_ASM189866v1	-	-
Caedibacter sp. 38-128	1895736	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	1.95773	38.1	-	MKUU01	67	1813	1719	12/9/16	12/9/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN05660589	GCA_001898705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/705/GCA_001898705.1_ASM189870v1	-	-
Glutamicibacter sp. 0426	1913445	PRJNA349204	349204	Terrabacteria group	Actinobacteria	3.54947	62	-	MPBI01	23	3300	3188	12/16/16	4/16/17	Contig	Shandong University	SAMN05928540	GCA_001906485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/485/GCA_001906485.1_ASM190648v1	-	426
Streptomyces kebangsaanensis	864058	PRJNA269542	269542	Terrabacteria group	Actinobacteria	8.24489	71.5	-	JUJA01	170	7664	6525	12/16/16	3/14/17	Scaffold	The National University of Malaysia	SAMN03254380	GCA_001906585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/585/GCA_001906585.1_ASM190658v1	-	SUK12
Actinomyces hordeovulneris	52770	PRJNA355618	355618	Terrabacteria group	Actinobacteria	2.52117	67.2	-	MQVS01	30	2197	2101	12/16/16	4/17/17	Scaffold	China CDC	SAMN06092722	GCA_001907235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/235/GCA_001907235.1_ASM190723v1	-	DSM 20732
Mycobacterium diernhoferi	1801	PRJNA338014	338014	Terrabacteria group	Actinobacteria	5.98238	67.9	-	MPNS01	52	5687	5506	12/9/16	4/16/17	Scaffold	UW	SAMN06034711	GCA_001907655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/655/GCA_001907655.1_ASM190765v1	-	Bard
Acidobacteria bacterium 13_2_20CM_57_7	1803465	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	2.8186	57.4	-	MNDD01	188	2635	2329	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327823	GCA_001914775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/775/GCA_001914775.1_ASM191477v1	27843720	-
Acidobacteria bacterium 13_2_20CM_57_17	1803464	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	4.57782	57.1	-	MNDE01	191	4082	3857	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327818	GCA_001914785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/785/GCA_001914785.1_ASM191478v1	27843720	-
Acidobacteria bacterium 13_2_20CM_56_17	1803463	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	1.21702	56.6	-	MNDF01	381	1255	1010	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327808	GCA_001914795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/795/GCA_001914795.1_ASM191479v1	27843720	-
Acidobacteriales bacterium 13_2_20CM_55_8	1803470	PRJNA297196	297196	Acidobacteria	Acidobacteriia	2.77486	55.3	-	MNDG01	168	2673	2403	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327822	GCA_001914815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/815/GCA_001914815.1_ASM191481v1	27843720	-
Verrucomicrobia bacterium 13_2_20CM_2_54_15_9cls	1805418	PRJNA297196	297196	PVC group	Verrucomicrobia	0.95951	54.5	-	MNDH01	73	966	880	12/23/16	12/23/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04327912	GCA_001914855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/855/GCA_001914855.1_ASM191485v1	27843720	-
Verrucomicrobia bacterium 13_2_20CM_2_54_15	1805417	PRJNA297196	297196	PVC group	Verrucomicrobia	1.52289	54.1	-	MNDI01	101	1470	1342	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327907	GCA_001914875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/875/GCA_001914875.1_ASM191487v1	27843720	-
Candidatus Rokubacteria bacterium 13_2_20CM_2_70_11	1805370	PRJNA297196	297196	unclassified Bacteria	Bacteria candidate phyla	2.88559	69.8	-	MNDJ01	155	2910	2725	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327906	GCA_001914885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/885/GCA_001914885.1_ASM191488v1	27843720	-
Nitrospirae bacterium 13_2_20CM_2_63_8	1805273	PRJNA297196	297196	Nitrospirae	unclassified Nitrospirae	1.0244	63.2	-	MNDL01	312	1099	885	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327902	GCA_001914935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/935/GCA_001914935.1_ASM191493v1	27843720	-
Candidatus Rokubacteria bacterium 13_2_20CM_2_64_8	1805369	PRJNA297196	297196	unclassified Bacteria	Bacteria candidate phyla	3.62641	68.5	-	MNDK01	201	3778	3519	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327911	GCA_001914905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/905/GCA_001914905.1_ASM191490v1	27843720	-
Nitrospirae bacterium 13_2_20CM_2_62_8	1805272	PRJNA297196	297196	Nitrospirae	unclassified Nitrospirae	2.01712	61.8	-	MNDM01	86	1944	1807	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327910	GCA_001914955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/955/GCA_001914955.1_ASM191495v1	27843720	-
Gemmatimonadetes bacterium 13_2_20CM_2_69_23	1805204	PRJNA297196	297196	FCB group	Gemmatimonadetes	3.77355	69.3	-	MNDP01	727	3642	3140	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327920	GCA_001914985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/985/GCA_001914985.1_ASM191498v1	27843720	-
Gemmatimonadetes bacterium 13_2_20CM_2_66_5	1805203	PRJNA297196	297196	FCB group	Gemmatimonadetes	1.33683	65.9	-	MNDQ01	99	1354	1222	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327916	GCA_001915005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/005/GCA_001915005.1_ASM191500v1	27843720	-
Gemmatimonadetes bacterium 13_2_20CM_2_65_7	1805202	PRJNA297196	297196	FCB group	Gemmatimonadetes	2.6841	65.1	-	MNDR01	101	2603	2434	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327915	GCA_001915025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/025/GCA_001915025.1_ASM191502v1	27843720	-
archaeon 13_2_20CM_2_53_6	1805020	PRJNA297196	297196	unclassified Archaea	unclassified Archaea (miscellaneous)	1.78728	53.3	-	MNDT01	69	1955	1863	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327914	GCA_001915065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/065/GCA_001915065.1_ASM191506v1	27843720	-
archaeon 13_2_20CM_2_52_21	1805019	PRJNA297196	297196	unclassified Archaea	unclassified Archaea (miscellaneous)	2.33005	51.9	-	MNDU01	216	2556	2374	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327913	GCA_001915075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/075/GCA_001915075.1_ASM191507v1	27843720	-
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1803507	PRJNA297196	297196	Proteobacteria	Alphaproteobacteria	6.44703	63.8	-	MNDV01	357	6233	5670	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327923	GCA_001915105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/105/GCA_001915105.1_ASM191510v1	27843720	-
Acidobacteria bacterium 13_2_20CM_2_66_4	1803462	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	2.86802	65.8	-	MNDZ01	223	2672	2332	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327918	GCA_001915135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/135/GCA_001915135.1_ASM191513v1	27843720	-
Actinobacteria bacterium 13_2_20CM_2_72_6	1803495	PRJNA297196	297196	Terrabacteria group	Actinobacteria	2.78618	72.1	-	MNDW01	212	2723	2310	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327917	GCA_001915145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/145/GCA_001915145.1_ASM191514v1	27843720	-
Bifidobacteriales bacterium 56_10	1897063	PRJNA321218	321218	Terrabacteria group	Actinobacteria	1.49776	56	-	MNPZ01	237	1348	947	12/23/16	12/23/16	Scaffold	None	SAMN05717205	GCA_001915185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/185/GCA_001915185.1_ASM191518v1	27819664	-
Bacteroidales bacterium 43_36	1897038	PRJNA321218	321218	FCB group	Bacteroidetes/Chlorobi group	4.06446	45.1	-	MNQI01	56	3363	3231	12/23/16	12/23/16	Scaffold	None	SAMN05717214	GCA_001915345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/345/GCA_001915345.1_ASM191534v1	27819664	-
Bacteroidales bacterium 43_8	1897039	PRJNA321218	321218	FCB group	Bacteroidetes/Chlorobi group	4.76629	42.3	-	MNQJ01	580	4518	3281	12/23/16	12/23/16	Scaffold	None	SAMN05717215	GCA_001915365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/365/GCA_001915365.1_ASM191536v1	27819664	-
Bacteroidales bacterium 52_46	1897040	PRJNA321218	321218	FCB group	Bacteroidetes/Chlorobi group	2.65503	50.9	-	MNQK01	35	2221	2133	12/23/16	12/23/16	Scaffold	None	SAMN05717216	GCA_001915385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/385/GCA_001915385.1_ASM191538v1	27819664	-
Bacteroidales bacterium 55_9	1897041	PRJNA321218	321218	FCB group	Bacteroidetes/Chlorobi group	1.68556	56.5	-	MNQL01	130	1534	1121	12/23/16	12/23/16	Scaffold	None	SAMN05717217	GCA_001915415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/415/GCA_001915415.1_ASM191541v1	27819664	-
Clostridiales bacterium 36_14	1897042	PRJNA321218	321218	Terrabacteria group	Firmicutes	3.05372	36.3	-	MNRC01	394	3348	2693	12/23/16	12/23/16	Scaffold	None	SAMN05717234	GCA_001915755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/755/GCA_001915755.1_ASM191575v1	27819664	-
Clostridiales bacterium 41_12_two_minus	1897043	PRJNA321218	321218	Terrabacteria group	Firmicutes	4.8527	41.6	-	MNRD01	325	4851	4121	12/23/16	12/23/16	Scaffold	None	SAMN05717235	GCA_001915765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/765/GCA_001915765.1_ASM191576v1	27819664	-
Clostridiales bacterium 41_21_two_genomes	1897044	PRJNA321218	321218	Terrabacteria group	Firmicutes	5.14689	41.4	-	MNRE01	191	4751	4314	12/23/16	12/23/16	Scaffold	None	SAMN05717236	GCA_001915775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/775/GCA_001915775.1_ASM191577v1	27819664	-
Clostridiales bacterium 42_27	1897045	PRJNA321218	321218	Terrabacteria group	Firmicutes	4.82737	48.4	-	MNRF01	476	4974	4169	12/23/16	12/23/16	Scaffold	None	SAMN05717237	GCA_001915795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/795/GCA_001915795.1_ASM191579v1	27819664	-
Clostridiales bacterium 44_9	1897046	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.4238	43.8	-	MNRG01	184	1488	1097	12/23/16	12/23/16	Scaffold	None	SAMN05717238	GCA_001915835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/835/GCA_001915835.1_ASM191583v1	27819664	-
Clostridiales bacterium 45_37	1897047	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.01047	44.4	-	MNRH01	105	1063	878	12/23/16	12/23/16	Scaffold	None	SAMN05717239	GCA_001915845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/845/GCA_001915845.1_ASM191584v1	27819664	-
Clostridiales bacterium 59_14	1897049	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.8395	58.7	-	MNRJ01	104	1806	1588	12/23/16	12/23/16	Scaffold	None	SAMN05717241	GCA_001915895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/895/GCA_001915895.1_ASM191589v1	27819664	-
Clostridiales bacterium 52_15	1897048	PRJNA321218	321218	Terrabacteria group	Firmicutes	3.09394	52.5	-	MNRI01	300	3373	2823	12/23/16	12/23/16	Scaffold	None	SAMN05717240	GCA_001915855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/855/GCA_001915855.1_ASM191585v1	27819664	-
Clostridiales bacterium Nov_37_41	1897050	PRJNA321218	321218	Terrabacteria group	Firmicutes	2.74759	37.6	-	MNRK01	295	2844	2269	12/23/16	12/23/16	Scaffold	None	SAMN05717242	GCA_001915915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/915/GCA_001915915.1_ASM191591v1	27819664	-
Firmicutes bacterium CAG_194_44_15	1897037	PRJNA321218	321218	Terrabacteria group	Firmicutes	2.63837	44.6	-	MNST01	67	2426	2274	12/23/16	12/23/16	Scaffold	None	SAMN05717277	GCA_001916615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/615/GCA_001916615.1_ASM191661v1	27819664	-
Firmicutes bacterium CAG:129_59_24	1897028	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.88205	59.2	-	MNSV01	47	1783	1669	12/23/16	12/23/16	Scaffold	None	SAMN05717279	GCA_001916625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/625/GCA_001916625.1_ASM191662v1	27819664	-
Firmicutes bacterium CAG:137_57_8	1897029	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.40282	58.2	-	MNSW01	188	1422	976	12/23/16	12/23/16	Scaffold	None	SAMN05717280	GCA_001916635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/635/GCA_001916635.1_ASM191663v1	27819664	-
Firmicutes bacterium CAG:110_56_8	1897027	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.48944	56.2	-	MNSU01	284	1691	1074	12/23/16	12/23/16	Scaffold	None	SAMN05717278	GCA_001916655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/655/GCA_001916655.1_ASM191665v1	27819664	-
Firmicutes bacterium CAG:176_59_8	1897030	PRJNA321218	321218	Terrabacteria group	Firmicutes	0.693014	61.1	-	MNSX01	88	787	563	12/23/16	12/23/16	Scaffold	None	SAMN05717281	GCA_001916695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/695/GCA_001916695.1_ASM191669v1	27819664	-
Firmicutes bacterium CAG:176_63_11	1897031	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.64645	62.3	-	MNSY01	99	1607	1352	12/23/16	12/23/16	Scaffold	None	SAMN05717282	GCA_001916705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/705/GCA_001916705.1_ASM191670v1	27819664	-
Firmicutes bacterium CAG:24053_14	1897032	PRJNA321218	321218	Terrabacteria group	Firmicutes	2.53221	53.3	-	MNSZ01	78	2504	2290	12/23/16	12/23/16	Scaffold	None	SAMN05717283	GCA_001916715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/715/GCA_001916715.1_ASM191671v1	27819664	-
Firmicutes bacterium CAG:272_52_7	1897033	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.15413	52.2	-	MNTA01	262	1385	833	12/23/16	12/23/16	Scaffold	None	SAMN05717284	GCA_001916755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/755/GCA_001916755.1_ASM191675v1	27819664	-
Firmicutes bacterium CAG:321_26_22	1897034	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.32056	26.4	-	MNTB01	38	1349	1275	12/23/16	12/23/16	Scaffold	None	SAMN05717285	GCA_001916775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/775/GCA_001916775.1_ASM191677v1	27819664	-
Firmicutes bacterium CAG:65_45_313	1897036	PRJNA321218	321218	Terrabacteria group	Firmicutes	3.20045	46.2	-	MNTD01	114	2952	2790	12/23/16	12/23/16	Scaffold	None	SAMN05717287	GCA_001916785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/785/GCA_001916785.1_ASM191678v1	27819664	-
Firmicutes bacterium CAG:552_39_19	1897035	PRJNA321218	321218	Terrabacteria group	Firmicutes	2.50338	41.7	-	MNTC01	120	2416	2224	12/23/16	12/23/16	Scaffold	None	SAMN05717286	GCA_001916795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/795/GCA_001916795.1_ASM191679v1	27819664	-
Melainabacteria sp. 35_41	1897008	PRJNA321218	321218	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.03266	34	-	MNTS01	16	2101	2045	12/23/16	12/23/16	Contig	None	SAMN05717302	GCA_001917115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/115/GCA_001917115.1_ASM191711v1	27819664	-
Candidatus Melainabacteria bacterium LEY3_CP_29_8	1913460	PRJNA321218	321218	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.22811	29.4	-	MNUB01	171	1454	1049	12/23/16	12/23/16	Scaffold	None	SAMN05717311	GCA_001917285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/285/GCA_001917285.1_ASM191728v1	27819664	-
Verrucomicrobia bacterium CAG:312_58_20	1897025	PRJNA321218	321218	PVC group	Verrucomicrobia	2.29864	57.8	-	MNUC01	42	2039	1957	12/23/16	12/23/16	Scaffold	None	SAMN05717312	GCA_001917305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/305/GCA_001917305.1_ASM191730v1	27819664	-
Nitrospirae bacterium 13_2_20CM_2_61_4	1805271	PRJNA297196	297196	Nitrospirae	unclassified Nitrospirae	2.42136	60.5	-	MNDN01	1719	2240	1584	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327903	GCA_001917375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/375/GCA_001917375.1_ASM191737v1	27843720	-
Actinobacteria bacterium 13_2_20CM_2_71_6	1803494	PRJNA297196	297196	Terrabacteria group	Actinobacteria	5.78522	70.9	-	MNDX01	282	5371	4736	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327921	GCA_001917385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/385/GCA_001917385.1_ASM191738v1	27843720	-
Acidobacteria bacterium 13_2_20CM_2_57_6	1803461	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	4.45554	57.4	-	MNEA01	169	3953	3722	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327919	GCA_001917435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/435/GCA_001917435.1_ASM191743v1	27843720	-
Acidobacteria bacterium 13_2_20CM_2_57_12	1803460	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	2.42909	56.8	-	MNEB01	176	2171	1995	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327909	GCA_001917455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/455/GCA_001917455.1_ASM191745v1	27843720	-
Actinobacteria bacterium 13_2_20CM_2_66_6	1803492	PRJNA297196	297196	Terrabacteria group	Actinobacteria	8.01854	66.5	-	MNDY01	574	8457	7628	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327922	GCA_001917445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/445/GCA_001917445.1_ASM191744v1	27843720	-
Acidobacteriales bacterium 13_2_20CM_2_55_5	1803469	PRJNA297196	297196	Acidobacteria	Acidobacteriia	1.75738	55.2	-	MNEC01	131	1728	1553	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327924	GCA_001917495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/495/GCA_001917495.1_ASM191749v1	27843720	-
Thaumarchaeota archaeon 13_1_40CM_38_12	1805393	PRJNA297196	297196	TACK group	Thaumarchaeota	1.20857	37.7	-	MNED01	71	1397	1311	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327832	GCA_001917505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/505/GCA_001917505.1_ASM191750v1	27843720	-
Candidatus Rokubacteria bacterium 13_1_40CM_69_96	1805368	PRJNA297196	297196	unclassified Bacteria	Bacteria candidate phyla	1.68823	70.4	-	MNEE01	380	1862	1566	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327833	GCA_001917525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/525/GCA_001917525.1_ASM191752v1	27843720	-
Candidatus Rokubacteria bacterium 13_1_40CM_69_27	1805367	PRJNA297196	297196	unclassified Bacteria	Bacteria candidate phyla	3.67588	69.5	-	MNEF01	127	3682	3519	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327836	GCA_001917535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/535/GCA_001917535.1_ASM191753v1	27843720	-
Nitrospirae bacterium 13_1_40CM_62_7	1805270	PRJNA297196	297196	Nitrospirae	unclassified Nitrospirae	0.837508	62	-	MNEH01	76	858	728	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327842	GCA_001917575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/575/GCA_001917575.1_ASM191757v1	27843720	-
Candidatus Rokubacteria bacterium 13_1_40CM_68_15	1805366	PRJNA297196	297196	unclassified Bacteria	Bacteria candidate phyla	4.11248	68.4	-	MNEG01	174	4229	3948	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327837	GCA_001917585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/585/GCA_001917585.1_ASM191758v1	27843720	-
Gemmatimonadetes bacterium 13_1_40CM_70_12	1805198	PRJNA297196	297196	FCB group	Gemmatimonadetes	0.413418	69.8	-	MNEJ01	41	430	377	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327841	GCA_001917615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/615/GCA_001917615.1_ASM191761v1	27843720	-
Gemmatimonadetes bacterium 13_1_40CM_70_15	1805199	PRJNA297196	297196	FCB group	Gemmatimonadetes	1.56834	69.7	-	MNEI01	104	1537	1387	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327853	GCA_001917625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/625/GCA_001917625.1_ASM191762v1	27843720	-
Gemmatimonadetes bacterium 13_1_40CM_70_11	1805197	PRJNA297196	297196	FCB group	Gemmatimonadetes	1.53338	70	-	MNEK01	120	1483	1302	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327849	GCA_001917655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/655/GCA_001917655.1_ASM191765v1	27843720	-
Gemmatimonadetes bacterium 13_1_40CM_69_22	1805196	PRJNA297196	297196	FCB group	Gemmatimonadetes	2.36346	69.6	-	MNEL01	60	2152	2067	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327852	GCA_001917665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/665/GCA_001917665.1_ASM191766v1	27843720	-
Gemmatimonadetes bacterium 13_1_40CM_66_11	1805195	PRJNA297196	297196	FCB group	Gemmatimonadetes	2.83744	65.9	-	MNEM01	204	2812	2492	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327848	GCA_001917695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/695/GCA_001917695.1_ASM191769v1	27843720	-
Deltaproteobacteria bacterium 13_1_40CM_68_24	1805123	PRJNA297196	297196	Proteobacteria	delta/epsilon subdivisions	1.18161	68.4	-	MNEN01	95	1171	1056	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327845	GCA_001917705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/705/GCA_001917705.1_ASM191770v1	27843720	-
Chloroflexi bacterium 13_1_40CM_68_21	1805084	PRJNA297196	297196	Terrabacteria group	Chloroflexi	1.25091	67.9	-	MNEO01	90	1343	1238	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327840	GCA_001917735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/735/GCA_001917735.1_ASM191773v1	27843720	-
Chloroflexi bacterium 13_1_40CM_68_15	1805083	PRJNA297196	297196	Terrabacteria group	Chloroflexi	0.437866	68.3	-	MNEP01	44	497	433	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327851	GCA_001917745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/745/GCA_001917745.1_ASM191774v1	27843720	-
Chloroflexi bacterium 13_1_40CM_66_19	1805081	PRJNA297196	297196	Terrabacteria group	Chloroflexi	1.58499	65.9	-	MNER01	101	1690	1563	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327834	GCA_001917775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/775/GCA_001917775.1_ASM191777v1	27843720	-
Chloroflexi bacterium 13_1_40CM_67_9	1805082	PRJNA297196	297196	Terrabacteria group	Chloroflexi	0.927486	67.2	-	MNEQ01	73	1014	887	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327846	GCA_001917785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/785/GCA_001917785.1_ASM191778v1	27843720	-
Chloroflexi bacterium 13_1_40CM_65_17	1805080	PRJNA297196	297196	Terrabacteria group	Chloroflexi	2.51862	65.4	-	MNES01	98	2638	2485	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327847	GCA_001917815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/815/GCA_001917815.1_ASM191781v1	27843720	-
Chloroflexi bacterium 13_1_40CM_55_7	1805079	PRJNA297196	297196	Terrabacteria group	Chloroflexi	0.946456	55.2	-	MNET01	87	941	802	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327843	GCA_001917825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/825/GCA_001917825.1_ASM191782v1	27843720	-
Armatimonadetes bacterium 13_1_40CM_64_14	1805026	PRJNA297196	297196	Terrabacteria group	Armatimonadetes	2.07906	64	-	MNEU01	95	2037	1884	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327838	GCA_001917855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/855/GCA_001917855.1_ASM191785v1	27843720	-
Candidatus Nitrososphaera sp. 13_1_40CM_48_12	1805054	PRJNA297196	297196	TACK group	Thaumarchaeota	0.776466	48.5	-	MNEV01	52	908	848	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327844	GCA_001917865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/865/GCA_001917865.1_ASM191786v1	27843720	-
Actinobacteria bacterium 13_1_40CM_66_12	1803491	PRJNA297196	297196	Terrabacteria group	Actinobacteria	1.55798	65.9	-	MNEW01	85	1640	1506	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327839	GCA_001917895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/895/GCA_001917895.1_ASM191789v1	27843720	-
Acidobacteria bacterium 13_1_40CM_65_14	1803459	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	6.33474	64.8	-	MNEX01	342	5523	5120	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327850	GCA_001917905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/905/GCA_001917905.1_ASM191790v1	27843720	-
Acidobacteria bacterium 13_1_40CM_56_16	1803458	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	4.57	55.8	-	MNEY01	261	4317	4029	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327835	GCA_001917925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/925/GCA_001917925.1_ASM191792v1	27843720	-
Verrucomicrobia bacterium 13_1_40CM_4_54_4	1805415	PRJNA297196	297196	PVC group	Verrucomicrobia	0.854927	54.4	-	MNEZ01	61	915	798	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327898	GCA_001917935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/935/GCA_001917935.1_ASM191793v1	27843720	-
Thaumarchaeota archaeon 13_1_40CM_4_48_7	1805396	PRJNA297196	297196	TACK group	Thaumarchaeota	1.17144	48.5	-	MNFA01	70	1343	1249	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327878	GCA_001917965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/965/GCA_001917965.1_ASM191796v1	27843720	-
Thaumarchaeota archaeon 13_1_40CM_4_38_7	1805394	PRJNA297196	297196	TACK group	Thaumarchaeota	1.38058	38.2	-	MNFB01	76	1582	1484	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327891	GCA_001917995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/995/GCA_001917995.1_ASM191799v1	27843720	-
Candidatus Rokubacteria bacterium 13_1_40CM_4_69_5	1805364	PRJNA297196	297196	unclassified Bacteria	Bacteria candidate phyla	4.1637	69	-	MNFC01	189	4241	3776	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327888	GCA_001918005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/005/GCA_001918005.1_ASM191800v1	27843720	-
Candidatus Rokubacteria bacterium 13_1_40CM_4_69_39	1805363	PRJNA297196	297196	unclassified Bacteria	Bacteria candidate phyla	2.91729	70.2	-	MNFD01	356	3007	2736	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327884	GCA_001918015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/015/GCA_001918015.1_ASM191801v1	27843720	-
Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	1805361	PRJNA297196	297196	unclassified Bacteria	Bacteria candidate phyla	3.83624	67.8	-	MNFE01	278	3993	3626	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327883	GCA_001918035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/035/GCA_001918035.1_ASM191803v1	27843720	-
Nitrospirae bacterium 13_1_40CM_4_62_6	1805269	PRJNA297196	297196	Nitrospirae	unclassified Nitrospirae	1.74677	61.6	-	MNFF01	106	1733	1560	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327881	GCA_001918075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/075/GCA_001918075.1_ASM191807v1	27843720	-
Gemmatimonadetes bacterium 13_1_40CM_4_69_8	1805193	PRJNA297196	297196	FCB group	Gemmatimonadetes	5.98889	69.2	-	MNFG01	251	5590	5129	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327885	GCA_001918085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/085/GCA_001918085.1_ASM191808v1	27843720	-
Gemmatimonadetes bacterium 13_1_40CM_4_69_5	1805192	PRJNA297196	297196	FCB group	Gemmatimonadetes	1.084	69.3	-	MNFH01	92	1128	877	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327875	GCA_001918115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/115/GCA_001918115.1_ASM191811v1	27843720	-
Gemmatimonadetes bacterium 13_1_40CM_4_65_7	1805190	PRJNA297196	297196	FCB group	Gemmatimonadetes	2.55376	64.9	-	MNFI01	186	2521	2205	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327882	GCA_001918125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/125/GCA_001918125.1_ASM191812v1	27843720	-
Deltaproteobacteria bacterium 13_1_40CM_4_54_4	1805118	PRJNA297196	297196	Proteobacteria	delta/epsilon subdivisions	1.17329	54	-	MNFK01	99	1257	1022	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327894	GCA_001918165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/165/GCA_001918165.1_ASM191816v1	27843720	-
Deltaproteobacteria bacterium 13_1_40CM_4_68_19	1805121	PRJNA297196	297196	Proteobacteria	delta/epsilon subdivisions	3.46213	68.6	-	MNFJ01	196	3366	3132	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327890	GCA_001918155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/155/GCA_001918155.1_ASM191815v1	27843720	-
Chloroflexi bacterium 13_1_40CM_4_69_19	1805078	PRJNA297196	297196	Terrabacteria group	Chloroflexi	0.518886	69.9	-	MNFL01	47	574	514	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327874	GCA_001918185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/185/GCA_001918185.1_ASM191818v1	27843720	-
Chloroflexi bacterium 13_1_40CM_4_68_4	1805077	PRJNA297196	297196	Terrabacteria group	Chloroflexi	3.36564	67.7	-	MNFM01	203	3719	3181	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327892	GCA_001918205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/205/GCA_001918205.1_ASM191820v1	27843720	-
Chloroflexi bacterium 13_1_40CM_4_65_16	1805075	PRJNA297196	297196	Terrabacteria group	Chloroflexi	1.77832	65.7	-	MNFN01	121	1842	1691	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327887	GCA_001918235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/235/GCA_001918235.1_ASM191823v1	27843720	-
Chloroflexi bacterium 13_1_40CM_4_65_13	1805074	PRJNA297196	297196	Terrabacteria group	Chloroflexi	0.487372	65.4	-	MNFO01	21	501	457	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327889	GCA_001918245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/245/GCA_001918245.1_ASM191824v1	27843720	-
Betaproteobacteria bacterium 13_1_40CM_4_64_4	1805048	PRJNA297196	297196	Proteobacteria	Betaproteobacteria	1.60549	64.6	-	MNFQ01	136	1658	1319	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327886	GCA_001918295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/295/GCA_001918295.1_ASM191829v1	27843720	-
archaeon 13_1_40CM_4_53_4	1805017	PRJNA297196	297196	unclassified Archaea	unclassified Archaea (miscellaneous)	1.60828	52.9	-	MNFR01	91	1802	1625	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327880	GCA_001918315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/315/GCA_001918315.1_ASM191831v1	27843720	-
Actinobacteria bacterium 13_1_40CM_4_65_12	1803489	PRJNA297196	297196	Terrabacteria group	Actinobacteria	2.7079	65.2	-	MNFS01	140	2766	2593	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327876	GCA_001918325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/325/GCA_001918325.1_ASM191832v1	27843720	-
Acidobacteria bacterium 13_1_40CM_4_69_4	1803457	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	1.44663	68.8	-	MNFT01	116	1364	1054	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327899	GCA_001918335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/335/GCA_001918335.1_ASM191833v1	27843720	-
Acidobacteria bacterium 13_1_40CM_4_65_8	1803456	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	5.15662	64.9	-	MNFU01	311	4507	4098	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327879	GCA_001918375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/375/GCA_001918375.1_ASM191837v1	27843720	-
Acidobacteria bacterium 13_1_40CM_4_61_5	1803455	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	1.5892	60.9	-	MNFV01	124	1525	1292	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327895	GCA_001918395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/395/GCA_001918395.1_ASM191839v1	27843720	-
Acidobacteria bacterium 13_1_40CM_4_58_4	1803453	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	5.50716	57.5	-	MNFW01	346	5164	4430	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327893	GCA_001918405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/405/GCA_001918405.1_ASM191840v1	27843720	-
Acidobacteria bacterium 13_1_40CM_4_57_6	1803452	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	1.10306	57.2	-	MNFX01	98	1034	878	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327873	GCA_001918415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/415/GCA_001918415.1_ASM191841v1	27843720	-
Thaumarchaeota archaeon 13_1_40CM_3_50_5	1805392	PRJNA297196	297196	TACK group	Thaumarchaeota	1.44623	49.5	-	MNFY01	337	1683	1467	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328015	GCA_001918455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/455/GCA_001918455.1_ASM191845v1	27843720	-
Thaumarchaeota archaeon 13_1_40CM_3_38_6	1805390	PRJNA297196	297196	TACK group	Thaumarchaeota	1.45103	37.9	-	MNFZ01	86	1671	1560	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327999	GCA_001918475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/475/GCA_001918475.1_ASM191847v1	27843720	-
Nitrospirae bacterium 13_1_40CM_3_62_11	1805267	PRJNA297196	297196	Nitrospirae	unclassified Nitrospirae	1.08755	62.1	-	MNGB01	79	1084	974	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328003	GCA_001918505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/505/GCA_001918505.1_ASM191850v1	27843720	-
Candidatus Rokubacteria bacterium 13_1_40CM_3_69_38	1805359	PRJNA297196	297196	unclassified Bacteria	Bacteria candidate phyla	2.71813	70.2	-	MNGA01	362	2812	2521	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328012	GCA_001918485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/485/GCA_001918485.1_ASM191848v1	27843720	-
Gemmatimonadetes bacterium 13_1_40CM_3_70_8	1805189	PRJNA297196	297196	FCB group	Gemmatimonadetes	0.694682	69.7	-	MNGC01	65	684	606	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327995	GCA_001918525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/525/GCA_001918525.1_ASM191852v1	27843720	-
Gemmatimonadetes bacterium 13_1_40CM_3_70_6	1805188	PRJNA297196	297196	FCB group	Gemmatimonadetes	1.5314	69.9	-	MNGD01	92	1465	1316	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328007	GCA_001918555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/555/GCA_001918555.1_ASM191855v1	27843720	-
Gemmatimonadetes bacterium 13_1_40CM_3_66_12	1805185	PRJNA297196	297196	FCB group	Gemmatimonadetes	2.65776	65.9	-	MNGF01	128	2585	2431	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327993	GCA_001918575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/575/GCA_001918575.1_ASM191857v1	27843720	-
Gemmatimonadetes bacterium 13_1_40CM_3_69_22	1805187	PRJNA297196	297196	FCB group	Gemmatimonadetes	1.70215	69.5	-	MNGE01	108	1665	1548	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328006	GCA_001918585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/585/GCA_001918585.1_ASM191858v1	27843720	-
Gemmatimonadetes bacterium 13_1_40CM_3_65_8	1805184	PRJNA297196	297196	FCB group	Gemmatimonadetes	1.9399	64.9	-	MNGG01	118	1891	1718	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327996	GCA_001918595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/595/GCA_001918595.1_ASM191859v1	27843720	-
Firmicutes bacterium 13_1_40CM_3_65_11	1805156	PRJNA297196	297196	Terrabacteria group	Firmicutes	0.326395	65.4	-	MNGH01	173	329	257	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328016	GCA_001918635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/635/GCA_001918635.1_ASM191863v1	27843720	-
Deltaproteobacteria bacterium 13_1_40CM_3_71_4	1805117	PRJNA297196	297196	Proteobacteria	delta/epsilon subdivisions	0.333263	70.9	-	MNGI01	35	367	306	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328010	GCA_001918655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/655/GCA_001918655.1_ASM191865v1	27843720	-
Deltaproteobacteria bacterium 13_1_40CM_3_69_14	1805116	PRJNA297196	297196	Proteobacteria	delta/epsilon subdivisions	2.83226	68.8	-	MNGJ01	148	2689	2511	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327997	GCA_001918665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/665/GCA_001918665.1_ASM191866v1	27843720	-
Crenarchaeota archaeon 13_1_40CM_3_53_5	1805098	PRJNA297196	297196	TACK group	Crenarchaeota	2.46089	52.9	-	MNGL01	88	2532	2419	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328014	GCA_001918715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/715/GCA_001918715.1_ASM191871v1	27843720	-
Crenarchaeota archaeon 13_1_40CM_3_52_4	1805097	PRJNA297196	297196	TACK group	Crenarchaeota	0.757096	52.1	-	MNGM01	59	865	791	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328002	GCA_001918735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/735/GCA_001918735.1_ASM191873v1	27843720	-
Crenarchaeota archaeon 13_1_40CM_3_52_17	1805096	PRJNA297196	297196	TACK group	Crenarchaeota	1.77568	51.8	-	MNGN01	66	1943	1852	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328004	GCA_001918745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/745/GCA_001918745.1_ASM191874v1	27843720	-
Crenarchaeota archaeon 13_1_40CM_3_52_10	1805095	PRJNA297196	297196	TACK group	Crenarchaeota	1.32544	51.9	-	MNGO01	74	1489	1408	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328000	GCA_001918765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/765/GCA_001918765.1_ASM191876v1	27843720	-
Chloroflexi bacterium 13_1_40CM_3_70_6	1805073	PRJNA297196	297196	Terrabacteria group	Chloroflexi	0.532936	69.8	-	MNGP01	49	594	514	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328013	GCA_001918795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/795/GCA_001918795.1_ASM191879v1	27843720	-
Chloroflexi bacterium 13_1_40CM_3_65_12	1805072	PRJNA297196	297196	Terrabacteria group	Chloroflexi	2.36865	65.3	-	MNGQ01	110	2487	2341	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328009	GCA_001918815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/815/GCA_001918815.1_ASM191881v1	27843720	-
Actinobacteria bacterium 13_1_40CM_3_66_19	1803487	PRJNA297196	297196	Terrabacteria group	Actinobacteria	1.13581	66	-	MNGS01	84	1186	1110	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327994	GCA_001918845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/845/GCA_001918845.1_ASM191884v1	27843720	-
Acidobacteria bacterium 13_1_40CM_3_65_5	1803450	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	3.57111	65.1	-	MNGT01	301	3355	2910	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328008	GCA_001918865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/865/GCA_001918865.1_ASM191886v1	27843720	-
Acidobacteria bacterium 13_1_40CM_3_56_11	1803448	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	3.38946	55.7	-	MNGU01	228	3207	2957	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327998	GCA_001918885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/885/GCA_001918885.1_ASM191888v1	27843720	-
Armatimonadetes bacterium 13_1_40CM_3_65_7	1805024	PRJNA297196	297196	Terrabacteria group	Armatimonadetes	4.45716	65.1	-	MNGR01	2739	4314	3088	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327990	GCA_001918835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/835/GCA_001918835.1_ASM191883v1	27843720	-
Acidobacteria bacterium 13_1_40CM_3_55_6	1803447	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	2.30105	54.6	-	MNGV01	184	2125	1883	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328011	GCA_001918905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/905/GCA_001918905.1_ASM191890v1	27843720	-
Acidobacteriales bacterium 13_1_40CM_3_55_5	1803468	PRJNA297196	297196	Acidobacteria	Acidobacteriia	2.86579	55.2	-	MNGW01	175	2774	2475	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327992	GCA_001918935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/935/GCA_001918935.1_ASM191893v1	27843720	-
Thaumarchaeota archaeon 13_1_40CM_2_39_7	1805388	PRJNA297196	297196	TACK group	Thaumarchaeota	0.935896	38.5	-	MNGX01	202	1103	962	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327969	GCA_001918945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/945/GCA_001918945.1_ASM191894v1	27843720	-
Thaumarchaeota archaeon 13_1_40CM_2_39_13_2	1805386	PRJNA297196	297196	TACK group	Thaumarchaeota	0.791146	39.1	-	MNGY01	124	918	805	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327968	GCA_001918975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/975/GCA_001918975.1_ASM191897v1	27843720	-
Thaumarchaeota archaeon 13_1_40CM_2_39_13_1	1805385	PRJNA297196	297196	TACK group	Thaumarchaeota	0.548217	39	-	MNGZ01	79	679	611	12/23/16	12/23/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04327966	GCA_001918995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/995/GCA_001918995.1_ASM191899v1	27843720	-
Candidatus Rokubacteria bacterium 13_1_40CM_2_70_45	1805357	PRJNA297196	297196	unclassified Bacteria	Bacteria candidate phyla	2.10277	70.5	-	MNHA01	328	2251	1996	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327925	GCA_001919015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/015/GCA_001919015.1_ASM191901v1	27843720	-
Candidatus Rokubacteria bacterium 13_1_40CM_2_68_8	1805354	PRJNA297196	297196	unclassified Bacteria	Bacteria candidate phyla	2.65717	68.5	-	MNHB01	184	2632	2422	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327964	GCA_001919035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/035/GCA_001919035.1_ASM191903v1	27843720	-
Candidatus Rokubacteria bacterium 13_1_40CM_2_68_13	1805353	PRJNA297196	297196	unclassified Bacteria	Bacteria candidate phyla	2.32246	68.4	-	MNHC01	183	2421	2238	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327956	GCA_001919045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/045/GCA_001919045.1_ASM191904v1	27843720	-
Nitrospirae bacterium 13_1_40CM_2_62_10	1805265	PRJNA297196	297196	Nitrospirae	unclassified Nitrospirae	2.27981	61.8	-	MNHD01	628	2249	1890	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327928	GCA_001919055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/055/GCA_001919055.1_ASM191905v1	27843720	-
Myxococcales bacterium 13_1_40CM_2_68_15	1805256	PRJNA297196	297196	Proteobacteria	delta/epsilon subdivisions	1.16913	68.2	-	MNHE01	447	1122	876	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327926	GCA_001919095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/095/GCA_001919095.1_ASM191909v1	27843720	-
Gemmatimonadetes bacterium 13_1_40CM_2_70_7	1805183	PRJNA297196	297196	FCB group	Gemmatimonadetes	1.61006	70	-	MNHG01	104	1592	1422	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327962	GCA_001919115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/115/GCA_001919115.1_ASM191911v1	27843720	-
Ignavibacteria bacterium 13_1_40CM_2_61_4	1805219	PRJNA297196	297196	FCB group	Bacteroidetes/Chlorobi group	3.18798	60.2	-	MNHF01	1905	2559	1828	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327940	GCA_001919105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/105/GCA_001919105.1_ASM191910v1	27843720	-
Gemmatimonadetes bacterium 13_1_40CM_2_60_3	1805180	PRJNA297196	297196	FCB group	Gemmatimonadetes	1.40845	60	-	MNHH01	978	1224	824	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327970	GCA_001919145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/145/GCA_001919145.1_ASM191914v1	27843720	-
Crenarchaeota archaeon 13_1_40CM_2_52_14	1805092	PRJNA297196	297196	TACK group	Crenarchaeota	1.62143	51.8	-	MNHJ01	61	1802	1728	12/23/16	12/23/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04327957	GCA_001919175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/175/GCA_001919175.1_ASM191917v1	27843720	-
Chloroflexi bacterium 13_1_40CM_2_70_6	1805070	PRJNA297196	297196	Terrabacteria group	Chloroflexi	1.62271	70.4	-	MNHK01	112	1723	1580	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327965	GCA_001919195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/195/GCA_001919195.1_ASM191919v1	27843720	-
Chloroflexi bacterium 13_1_40CM_2_68_14	1805069	PRJNA297196	297196	Terrabacteria group	Chloroflexi	3.02708	68.3	-	MNHL01	209	2977	2753	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327955	GCA_001919205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/205/GCA_001919205.1_ASM191920v1	27843720	-
Chloroflexi bacterium 13_1_40CM_2_67_6	1805068	PRJNA297196	297196	Terrabacteria group	Chloroflexi	0.133342	66.6	-	MNHM01	13	147	133	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327951	GCA_001919215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/215/GCA_001919215.1_ASM191921v1	27843720	-
archaeon 13_1_40CM_2_52_4	1805014	PRJNA297196	297196	unclassified Archaea	unclassified Archaea (miscellaneous)	0.803411	51.9	-	MNHN01	65	897	820	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327958	GCA_001919275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/275/GCA_001919275.1_ASM191927v1	27843720	-
archaeon 13_1_40CM_2_52_13	1805013	PRJNA297196	297196	unclassified Archaea	unclassified Archaea (miscellaneous)	1.50086	52	-	MNHO01	79	1655	1574	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327953	GCA_001919285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/285/GCA_001919285.1_ASM191928v1	27843720	-
Thaumarchaeota archaeon 13_1_40CM_2_39_4	1805387	PRJNA297196	297196	TACK group	Thaumarchaeota	0.825498	38.3	-	MNHP01	200	932	825	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327967	GCA_001919295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/295/GCA_001919295.1_ASM191929v1	27843720	-
Actinobacteria bacterium 13_1_40CM_2_66_13	1803485	PRJNA297196	297196	Terrabacteria group	Actinobacteria	1.12902	66	-	MNHQ01	83	1176	1087	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327963	GCA_001919305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/305/GCA_001919305.1_ASM191930v1	27843720	-
Actinobacteria bacterium 13_1_40CM_2_65_8	1803484	PRJNA297196	297196	Terrabacteria group	Actinobacteria	2.40239	65.1	-	MNHR01	126	2535	2363	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327949	GCA_001919355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/355/GCA_001919355.1_ASM191935v1	27843720	-
Acidobacteria bacterium 13_1_40CM_2_68_5	1803446	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	2.91454	68.1	-	MNHS01	208	2580	2216	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327954	GCA_001919365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/365/GCA_001919365.1_ASM191936v1	27843720	-
Acidobacteria bacterium 13_1_40CM_2_68_10	1803445	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	1.85308	68	-	MNHT01	122	1680	1535	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327959	GCA_001919375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/375/GCA_001919375.1_ASM191937v1	27843720	-
Acidobacteria bacterium 13_1_40CM_2_64_6	1803444	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	1.25303	64.4	-	MNHU01	352	1139	945	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327971	GCA_001919385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/385/GCA_001919385.1_ASM191938v1	27843720	-
Acidobacteria bacterium 13_1_40CM_2_56_5	1803441	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	1.10772	56.5	-	MNHW01	101	1031	922	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327961	GCA_001919435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/435/GCA_001919435.1_ASM191943v1	27843720	-
Acidobacteria bacterium 13_1_40CM_2_60_7	1803443	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	1.95541	60.3	-	MNHV01	151	1719	1565	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327960	GCA_001919445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/445/GCA_001919445.1_ASM191944v1	27843720	-
Acidobacteria bacterium 13_1_40CM_2_56_11	1803440	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	3.18183	55.8	-	MNHX01	222	2999	2790	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327952	GCA_001919455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/455/GCA_001919455.1_ASM191945v1	27843720	-
Verrucomicrobia bacterium 13_1_20CM_54_28	1805411	PRJNA297196	297196	PVC group	Verrucomicrobia	2.24565	54.2	-	MNHY01	118	2158	1996	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327675	GCA_001919485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/485/GCA_001919485.1_ASM191948v1	27843720	-
Candidatus Rokubacteria bacterium 13_1_20CM_70_15	1805350	PRJNA297196	297196	unclassified Bacteria	Bacteria candidate phyla	0.880382	69.6	-	MNHZ01	84	914	786	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327670	GCA_001919515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/515/GCA_001919515.1_ASM191951v1	27843720	-
Cyanobacteria bacterium 13_1_40CM_2_61_4	1805101	PRJNA297196	297196	Terrabacteria group	Cyanobacteria/Melainabacteria group	8.50931	60.7	-	MNHI01	6206	5843	4209	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327943	GCA_001919235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/235/GCA_001919235.1_ASM191923v1	27843720	-
Gemmatimonadetes bacterium 13_1_20CM_69_52	1805178	PRJNA297196	297196	FCB group	Gemmatimonadetes	0.168248	69.1	-	MNIB01	88	192	135	12/23/16	12/23/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04327678	GCA_001919545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/545/GCA_001919545.1_ASM191954v1	27843720	-
Gemmatimonadetes bacterium 13_1_20CM_69_28	1805177	PRJNA297196	297196	FCB group	Gemmatimonadetes	2.34284	68.9	-	MNIC01	154	2183	2004	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327667	GCA_001919565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/565/GCA_001919565.1_ASM191956v1	27843720	-
Chloroflexi bacterium 13_1_20CM_66_33	1805065	PRJNA297196	297196	Terrabacteria group	Chloroflexi	0.771625	66.6	-	MNIE01	64	770	707	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327668	GCA_001919605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/605/GCA_001919605.1_ASM191960v1	27843720	-
Chloroflexi bacterium 13_1_20CM_54_36	1805064	PRJNA297196	297196	Terrabacteria group	Chloroflexi	1.31547	54.5	-	MNIF01	117	1230	1117	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327671	GCA_001919625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/625/GCA_001919625.1_ASM191962v1	27843720	-
Chloroflexi bacterium 13_1_20CM_50_12	1805063	PRJNA297196	297196	Terrabacteria group	Chloroflexi	0.510866	49.9	-	MNIG01	49	543	479	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327672	GCA_001919645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/645/GCA_001919645.1_ASM191964v1	27843720	-
archaeon 13_1_20CM_52_20	1805012	PRJNA297196	297196	unclassified Archaea	unclassified Archaea (miscellaneous)	0.737615	52.2	-	MNII01	69	793	731	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327669	GCA_001919675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/675/GCA_001919675.1_ASM191967v1	27843720	-
Betaproteobacteria bacterium 13_1_20CM_67_22	1805045	PRJNA297196	297196	Proteobacteria	Betaproteobacteria	0.160537	67.2	-	MNIH01	18	179	157	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327673	GCA_001919685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/685/GCA_001919685.1_ASM191968v1	27843720	-
Acidobacteria bacterium 13_1_20CM_58_21	1803438	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	3.86111	57.9	-	MNIJ01	239	3334	3068	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327674	GCA_001919715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/715/GCA_001919715.1_ASM191971v1	27843720	-
Verrucomicrobia bacterium 13_1_20CM_4_55_9	1805409	PRJNA297196	297196	PVC group	Verrucomicrobia	0.567922	55.4	-	MNIK01	53	574	496	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327797	GCA_001919725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/725/GCA_001919725.1_ASM191972v1	27843720	-
Verrucomicrobia bacterium 13_1_20CM_4_54_11	1805408	PRJNA297196	297196	PVC group	Verrucomicrobia	2.77681	54.3	-	MNIL01	167	2722	2502	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327788	GCA_001919755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/755/GCA_001919755.1_ASM191975v1	27843720	-
Candidatus Rokubacteria bacterium 13_1_20CM_4_70_14	1805348	PRJNA297196	297196	unclassified Bacteria	Bacteria candidate phyla	3.30909	70	-	MNIM01	177	3351	3136	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327794	GCA_001919765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/765/GCA_001919765.1_ASM191976v1	27843720	-
Candidatus Rokubacteria bacterium 13_1_20CM_4_70_13	1805347	PRJNA297196	297196	unclassified Bacteria	Bacteria candidate phyla	0.540942	70.4	-	MNIN01	243	573	426	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327762	GCA_001919785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/785/GCA_001919785.1_ASM191978v1	27843720	-
Candidatus Rokubacteria bacterium 13_1_20CM_4_68_9	1805346	PRJNA297196	297196	unclassified Bacteria	Bacteria candidate phyla	4.11093	68.3	-	MNIO01	239	4320	3987	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327787	GCA_001919805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/805/GCA_001919805.1_ASM191980v1	27843720	-
Nitrospirae bacterium 13_1_20CM_4_62_6	1805263	PRJNA297196	297196	Nitrospirae	unclassified Nitrospirae	0.281158	62.3	-	MNIP01	26	301	255	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327802	GCA_001919835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/835/GCA_001919835.1_ASM191983v1	27843720	-
Gemmatimonadetes bacterium 13_1_20CM_4_69_16	1805174	PRJNA297196	297196	FCB group	Gemmatimonadetes	2.82012	69.1	-	MNIR01	87	2643	2516	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327786	GCA_001919865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/865/GCA_001919865.1_ASM191986v1	27843720	-
Gemmatimonadetes bacterium 13_1_20CM_4_66_11	1805172	PRJNA297196	297196	FCB group	Gemmatimonadetes	3.09751	65.9	-	MNIS01	120	3028	2839	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327792	GCA_001919895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/895/GCA_001919895.1_ASM191989v1	27843720	-
Euryarchaeota archaeon 13_1_20CM_4_64_14	1805139	PRJNA297196	297196	Euryarchaeota	unclassified Euryarchaeota	0.988769	63.8	-	MNIT01	76	1073	964	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327793	GCA_001919915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/915/GCA_001919915.1_ASM191991v1	27843720	-
Chloroflexi bacterium 13_1_20CM_4_66_7	1805062	PRJNA297196	297196	Terrabacteria group	Chloroflexi	0.622507	66.3	-	MNIW01	64	640	557	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327791	GCA_001919965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/965/GCA_001919965.1_ASM191996v1	27843720	-
Chloroflexi bacterium 13_1_20CM_4_66_15	1805061	PRJNA297196	297196	Terrabacteria group	Chloroflexi	0.379753	65.8	-	MNIX01	35	407	363	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327803	GCA_001919975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/975/GCA_001919975.1_ASM191997v1	27843720	-
Cyanobacteria bacterium 13_1_20CM_4_61_6	1805100	PRJNA297196	297196	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.13924	60.8	-	MNIV01	3215	2708	1953	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327782	GCA_001919945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/945/GCA_001919945.1_ASM191994v1	27843720	-
Armatimonadetes bacterium 13_1_20CM_4_65_7	1805021	PRJNA297196	297196	Terrabacteria group	Armatimonadetes	0.189863	64.5	-	MNJA01	18	198	171	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327800	GCA_001920045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/045/GCA_001920045.1_ASM192004v1	27843720	-
Alphaproteobacteria bacterium 13_1_20CM_4_65_11	1803503	PRJNA297196	297196	Proteobacteria	Alphaproteobacteria	0.538487	65.5	-	MNJB01	48	582	498	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327799	GCA_001920055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/055/GCA_001920055.1_ASM192005v1	27843720	-
Bacteriodetes bacterium 13_1_20CM_4_60_6	1805031	PRJNA297196	297196	FCB group	Bacteroidetes/Chlorobi group	4.34095	60.8	-	MNIZ01	3234	2682	1863	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327781	GCA_001920025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/025/GCA_001920025.1_ASM192002v1	27843720	-
Actinobacteria bacterium 13_1_20CM_4_69_9	1803481	PRJNA297196	297196	Terrabacteria group	Actinobacteria	1.8633	69.5	-	MNJC01	135	2127	1914	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327798	GCA_001920085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/085/GCA_001920085.1_ASM192008v1	27843720	-
Actinobacteria bacterium 13_1_20CM_4_68_12	1803479	PRJNA297196	297196	Terrabacteria group	Actinobacteria	1.37274	68.3	-	MNJD01	109	1449	1309	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327795	GCA_001920095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/095/GCA_001920095.1_ASM192009v1	27843720	-
Actinobacteria bacterium 13_1_20CM_4_66_15	1803478	PRJNA297196	297196	Terrabacteria group	Actinobacteria	0.24178	66.2	-	MNJE01	23	286	258	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327801	GCA_001920115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/115/GCA_001920115.1_ASM192011v1	27843720	-
Acidobacteria bacterium 13_1_20CM_4_57_11	1803435	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	1.99448	56.8	-	MNJF01	164	1817	1637	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327790	GCA_001920155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/155/GCA_001920155.1_ASM192015v1	27843720	-
Acidobacteria bacterium 13_1_20CM_4_56_7	1803434	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	2.86693	55.5	-	MNJG01	239	2779	2433	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327796	GCA_001920165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/165/GCA_001920165.1_ASM192016v1	27843720	-
Verrucomicrobia bacterium 13_1_20CM_3_54_17	1805405	PRJNA297196	297196	PVC group	Verrucomicrobia	2.43102	54.3	-	MNJH01	143	2368	2190	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327759	GCA_001920175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/175/GCA_001920175.1_ASM192017v1	27843720	-
Betaproteobacteria bacterium 13_1_20CM_3_63_8	1805040	PRJNA297196	297196	Proteobacteria	Betaproteobacteria	1.87008	62.6	-	MNJK01	167	1887	1597	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327757	GCA_001920245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/245/GCA_001920245.1_ASM192024v1	27843720	-
Alphaproteobacteria bacterium 13_1_20CM_3_64_12	1803502	PRJNA297196	297196	Proteobacteria	Alphaproteobacteria	1.76971	64.2	-	MNJL01	162	1769	1489	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327754	GCA_001920255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/255/GCA_001920255.1_ASM192025v1	27843720	-
Actinobacteria bacterium 13_1_20CM_3_71_11	1803477	PRJNA297196	297196	Terrabacteria group	Actinobacteria	5.96668	71.3	-	MNJM01	439	5877	5068	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327751	GCA_001920275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/275/GCA_001920275.1_ASM192027v1	27843720	-
Catenulispora sp. 13_1_20CM_3_70_7	1805055	PRJNA297196	297196	Terrabacteria group	Actinobacteria	5.7225	69.9	-	MNJN01	414	5346	4431	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327756	GCA_001920315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/315/GCA_001920315.1_ASM192031v1	27843720	-
Actinobacteria bacterium 13_1_20CM_3_68_9	1803475	PRJNA297196	297196	Terrabacteria group	Actinobacteria	2.30871	68.9	-	MNJO01	152	2413	2144	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327755	GCA_001920325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/325/GCA_001920325.1_ASM192032v1	27843720	-
Actinobacteria bacterium 13_1_20CM_3_68_10	1803474	PRJNA297196	297196	Terrabacteria group	Actinobacteria	1.14254	67.9	-	MNJP01	98	1221	1069	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327750	GCA_001920335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/335/GCA_001920335.1_ASM192033v1	27843720	-
Acidobacteria bacterium 13_1_20CM_3_58_11	1803432	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	2.74389	58.6	-	MNJQ01	198	2454	2253	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327753	GCA_001920375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/375/GCA_001920375.1_ASM192037v1	27843720	-
Thaumarchaeota archaeon 13_1_20CM_2_39_20	1805383	PRJNA297196	297196	TACK group	Thaumarchaeota	1.0555	39.1	-	MNJS01	61	1209	1135	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327723	GCA_001920395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/395/GCA_001920395.1_ASM192039v1	27843720	-
Thaumarchaeota archaeon 13_1_20CM_2_39_11	1805382	PRJNA297196	297196	TACK group	Thaumarchaeota	0.420678	39.4	-	MNJT01	129	544	448	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327680	GCA_001920405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/405/GCA_001920405.1_ASM192040v1	27843720	-
Acidobacteria bacterium 13_1_20CM_3_53_8	1803431	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	6.10271	52.9	-	MNJR01	155	5352	5054	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327758	GCA_001920415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/415/GCA_001920415.1_ASM192041v1	27843720	-
Thaumarchaeota archaeon 13_1_20CM_2_38_5	1805380	PRJNA297196	297196	TACK group	Thaumarchaeota	0.368693	38	-	MNJU01	130	446	358	12/23/16	12/23/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04327681	GCA_001920445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/445/GCA_001920445.1_ASM192044v1	27843720	-
Candidatus Rokubacteria bacterium 13_1_20CM_2_70_7	1805343	PRJNA297196	297196	unclassified Bacteria	Bacteria candidate phyla	2.12583	69.4	-	MNJV01	165	2200	1965	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327707	GCA_001920475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/475/GCA_001920475.1_ASM192047v1	27843720	-
Candidatus Rokubacteria bacterium 13_1_20CM_2_68_19	1805341	PRJNA297196	297196	unclassified Bacteria	Bacteria candidate phyla	2.8019	68.5	-	MNJX01	186	2900	2722	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327721	GCA_001920485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/485/GCA_001920485.1_ASM192048v1	27843720	-
Candidatus Rokubacteria bacterium 13_1_20CM_2_69_58	1805342	PRJNA297196	297196	unclassified Bacteria	Bacteria candidate phyla	2.60462	70.4	-	MNJW01	371	2768	2457	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327708	GCA_001920495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/495/GCA_001920495.1_ASM192049v1	27843720	-
Nitrospirae bacterium 13_1_20CM_2_62_14	1805260	PRJNA297196	297196	Nitrospirae	unclassified Nitrospirae	1.01135	62.3	-	MNJY01	74	996	909	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327718	GCA_001920515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/515/GCA_001920515.1_ASM192051v1	27843720	-
Gemmatimonadetes bacterium 13_1_20CM_2_70_10	1805170	PRJNA297196	297196	FCB group	Gemmatimonadetes	1.55608	70.1	-	MNJZ01	98	1532	1382	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327717	GCA_001920555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/555/GCA_001920555.1_ASM192055v1	27843720	-
Euryarchaeota archaeon 13_1_20CM_2_64_92	1805135	PRJNA297196	297196	Euryarchaeota	unclassified Euryarchaeota	0.258312	64.5	-	MNKA01	98	314	255	12/23/16	12/23/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04327679	GCA_001920565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/565/GCA_001920565.1_ASM192056v1	27843720	-
Crenarchaeota archaeon 13_1_20CM_2_53_14	1805094	PRJNA297196	297196	TACK group	Crenarchaeota	1.54169	53.3	-	MNKC01	42	1660	1598	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327724	GCA_001920575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/575/GCA_001920575.1_ASM192057v1	27843720	-
Deltaproteobacteria bacterium 13_1_20CM_2_69_21	1805109	PRJNA297196	297196	Proteobacteria	delta/epsilon subdivisions	2.83389	68.6	-	MNKB01	186	2763	2549	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327711	GCA_001920585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/585/GCA_001920585.1_ASM192058v1	27843720	-
Crenarchaeota archaeon 13_1_20CM_2_51_8	1805093	PRJNA297196	297196	TACK group	Crenarchaeota	3.31156	51.7	-	MNKD01	902	3919	3284	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327686	GCA_001920635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/635/GCA_001920635.1_ASM192063v1	27843720	-
Chloroflexi bacterium 13_1_20CM_2_70_9	1805058	PRJNA297196	297196	Terrabacteria group	Chloroflexi	1.50077	70.3	-	MNKE01	109	1589	1432	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327709	GCA_001920645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/645/GCA_001920645.1_ASM192064v1	27843720	-
archaeon 13_1_20CM_2_54_9	1805008	PRJNA297196	297196	unclassified Archaea	unclassified Archaea (miscellaneous)	1.8678	53.4	-	MNKG01	115	1955	1825	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327726	GCA_001920655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/655/GCA_001920655.1_ASM192065v1	27843720	-
Chloroflexi bacterium 13_1_20CM_2_59_7	1805056	PRJNA297196	297196	Terrabacteria group	Chloroflexi	1.76139	58.7	-	MNKF01	154	1667	1427	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327720	GCA_001920665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/665/GCA_001920665.1_ASM192066v1	27843720	-
archaeon 13_1_20CM_2_51_12	1805007	PRJNA297196	297196	unclassified Archaea	unclassified Archaea (miscellaneous)	3.13701	51.7	-	MNKH01	464	3591	3251	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327685	GCA_001920715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/715/GCA_001920715.1_ASM192071v1	27843720	-
Actinobacteria bacterium 13_1_20CM_2_66_18	1803472	PRJNA297196	297196	Terrabacteria group	Actinobacteria	1.40588	66	-	MNKI01	104	1460	1352	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327712	GCA_001920725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/725/GCA_001920725.1_ASM192072v1	27843720	-
Actinobacteria bacterium 13_1_20CM_2_65_11	1803471	PRJNA297196	297196	Terrabacteria group	Actinobacteria	2.43768	65.4	-	MNKJ01	96	2546	2406	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327713	GCA_001920735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/735/GCA_001920735.1_ASM192073v1	27843720	-
Acidobacteria bacterium 13_1_20CM_2_68_7	1803430	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	1.63258	67.9	-	MNKK01	136	1492	1257	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327716	GCA_001920755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/755/GCA_001920755.1_ASM192075v1	27843720	-
Acidobacteria bacterium 13_1_20CM_2_68_14	1803429	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	1.97334	68.1	-	MNKL01	126	1783	1646	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327710	GCA_001920795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/795/GCA_001920795.1_ASM192079v1	27843720	-
Acidobacteria bacterium 13_1_20CM_2_65_9	1803428	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	4.49101	64.9	-	MNKM01	313	3991	3625	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327683	GCA_001920805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/805/GCA_001920805.1_ASM192080v1	27843720	-
Acidobacteria bacterium 13_1_20CM_2_60_10	1803427	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	2.13659	60.1	-	MNKN01	166	1891	1689	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327714	GCA_001920815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/815/GCA_001920815.1_ASM192081v1	27843720	-
Acidobacteria bacterium 13_1_20CM_2_57_8	1803425	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	1.05526	56.6	-	MNKO01	104	1043	908	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327719	GCA_001920835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/835/GCA_001920835.1_ASM192083v1	27843720	-
Acidobacteria bacterium 13_1_20CM_2_55_15	1803424	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	3.44486	55.5	-	MNKP01	211	3299	3100	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327715	GCA_001920875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/875/GCA_001920875.1_ASM192087v1	27843720	-
Actinophytocola xinjiangensis	485602	PRJNA350600	350600	Terrabacteria group	Actinobacteria	9.53554	71.7	-	MSIF01	72	8359	8063	12/23/16	4/17/17	Contig	"North China University of Science and Technology, Tangshan China"	SAMN05942565	GCA_001921215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/921/215/GCA_001921215.1_ASM192121v1	-	CGMCC 4.4663
Aeromonas veronii	654	PRJNA279607	279607	Proteobacteria	Gammaproteobacteria	4.95506	58.4759	chromosome:NZ_CP014774.1/CP014774.1; plasmid pASP-a58:NZ_CP014775.1/CP014775.1	-	2	4616	4332	4/29/16	4/5/17	Complete Genome	NHGRI	SAMN03455926	GCA_001634325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/325/GCA_001634325.1_ASM163432v1	26888898	AVNIH1
Alteromonadales bacterium BS08	1895005	PRJNA340180	340180	Proteobacteria	Gammaproteobacteria	4.83622	47.2	-	MRUG01	123	4061	3885	12/28/16	4/16/17	Scaffold	DOE Joint Genome Institute	SAMN05661223	GCA_001922955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/955/GCA_001922955.1_ASM192295v1	-	BS08
Kluyvera intestini	1898961	PRJNA342563	342563	Proteobacteria	Gammaproteobacteria	5.76885	53.2	-	MKZW02	2	6218	1654	10/13/16	4/19/17	Contig	Human Microbiology Institute	SAMN05762249	GCA_001856865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/865/GCA_001856865.2_ASM185686v2	28007864	GT-16
Streptomyces antioxidans	1507734	PRJNA278501	278501	Terrabacteria group	Actinobacteria	9.11806	71.5	-	LAKD02	282	7476	7073	4/3/15	3/16/17	Contig	University of Malaya	SAMN03445834	GCA_000968685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/685/GCA_000968685.2_ASM96868v2	-	MUSC 164
Acuticoccus yangtzensis	1443441	PRJNA343888	343888	Proteobacteria	Alphaproteobacteria	5.04326	68.6	-	MJUX01	29	4416	4286	12/31/16	4/17/17	Contig	"Institute of Marine Microbes and Ecospheres, Xiamen University, Xiamen, China"	SAMN05818643	GCA_001927245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/245/GCA_001927245.1_ASM192724v1	-	JL1095
Mongoliimonas terrestris	1709001	PRJNA358329	358329	Proteobacteria	Alphaproteobacteria	5.0986	69.6	-	MSIG01	94	4503	4397	12/31/16	8/30/17	Contig	Inner Mongolia Agricultural University	SAMN06172149	GCA_001927285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/285/GCA_001927285.1_ASM192728v1	-	MIMtkB18
Pajaroellobacter abortibovis	1882918	PRJNA330989	330989	Proteobacteria	delta/epsilon subdivisions	1.82163	47.5	chromosome:NZ_CP016908.1/CP016908.1	-	1	1838	1769	1/4/17	4/16/17	Chromosome	"University of California, Davis"	SAMN05433522	GCA_001931505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/505/GCA_001931505.1_ASM193150v1	-	BTF92-0548A/99-0131
Pseudomonas frederiksbergensis	104087	PRJNA350793	350793	Proteobacteria	Gammaproteobacteria	6.11857	58.4756	chromosome:NZ_CP017886.1/CP017886.1; plasmid unnamed1:NZ_CP017887.1/CP017887.1	-	2	5814	5479	11/10/16	4/6/17	Complete Genome	CSIR-Institute of Himalayan Bioresource Technology	SAMN05947123	GCA_001874645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/645/GCA_001874645.1_ASM187464v1	-	ERDD5:01
Acidithiobacillus albertensis	119978	PRJNA351776	351776	Proteobacteria	Acidithiobacillia	3.50332	52.6	-	MOAD01	141	3650	3354	1/4/17	4/17/17	Scaffold	Fundacion Ciencia & Vida	SAMN05954282	GCA_001931655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/655/GCA_001931655.1_ASM193165v1	-	DSM 14366
Agrobacterium tumefaciens	358	PRJNA278497	278497	Proteobacteria	Alphaproteobacteria	5.66866	58.4702	chromosome circular:NZ_CP011246.1/CP011246.1; chromosome linear:NZ_CP011247.1/CP011247.1; plasmid pAt:NZ_CP011248.1/CP011248.1; plasmid pTi:NZ_CP011249.1/CP011249.1	-	4	5404	5184	4/13/15	4/3/17	Complete Genome	Academia Sinica	SAMN03420836	GCA_000971565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/565/GCA_000971565.1_ASM97156v1	26044425	Ach5
Actinomyces marimammalium	156892	PRJNA352903	352903	Terrabacteria group	Actinobacteria	1.84289	54.2	-	MPDM01	16	1611	1526	12/16/16	4/17/17	Scaffold	China CDC	SAMN06006700	GCA_001936115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/115/GCA_001936115.1_ASM193611v1	-	DSM 15383
Paenibacillus rhizosphaerae	297318	PRJNA343020	343020	Terrabacteria group	Firmicutes	7.77254	52.7	-	MRTP01	77	7112	6944	1/18/17	4/17/17	Contig	Cornell University	SAMN05929621	GCA_001956185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/185/GCA_001956185.1_ASM195618v1	-	FSL R5-0378
Monashia flava	1428657	PRJNA343847	343847	Terrabacteria group	Actinobacteria	4.2454	73.1	-	MLJO01	58	3897	3787	1/18/17	4/17/17	Contig	Monash University Malaysia	SAMN05915663	GCA_001956915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/915/GCA_001956915.1_ASM195691v1	-	MUSC 78
Frankia coriariae	1562887	PRJNA264340	264340	Terrabacteria group	Actinobacteria	5.79526	70.2	-	JWIO01	116	4976	4198	6/2/15	5/22/17	Scaffold	"University of Tunis El Manar, Faculty of Sciences of Tunis"	SAMN03121018	GCA_001017755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/755/GCA_001017755.1_ASM101775v1	26287281	BMG5.1
Nioella sediminis	1912092	PRJNA349210	349210	Proteobacteria	Alphaproteobacteria	3.95868	63.4	-	MNBL01	198	3933	3740	11/17/16	4/14/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05928556	GCA_001879695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/695/GCA_001879695.1_ASM187969v1	-	JS7-11
Pelobacter propionicus DSM 2379	338966	PRJNA13384	13384	Proteobacteria	delta/epsilon subdivisions	4.24112	58.4603	chromosome:NC_008609.1/CP000482.1; plasmid pPRO1:NC_008607.1/CP000483.1; plasmid pPRO2:NC_008608.1/CP000484.1	-	3	3902	3796	11/30/06	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598297	GCA_000015045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/045/GCA_000015045.1_ASM1504v1	-	DSM 2379
Chryseobacterium indoltheticum	254	PRJEB18846	360745	FCB group	Bacteroidetes/Chlorobi group	4.21484	34.2	-	FTMF01	35	3904	3782	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421682	GCA_900156145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/145/GCA_900156145.1_IMG-taxon_2681813551_annotated_assembly	-	ATCC 27950
Belliella pelovolcani	529505	PRJEB18838	360748	FCB group	Bacteroidetes/Chlorobi group	4.10784	38.6	-	FTOP01	44	3605	3497	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421761	GCA_900156785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/785/GCA_900156785.1_IMG-taxon_2681813558_annotated_assembly	-	DSM 46698
Alkalispirochaeta americana	159291	PRJEB18843	360742	Spirochaetes	Spirochaetia	3.30905	57.5	-	FTMS01	65	2920	2804	1/14/17	8/15/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05920897	GCA_900156105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/105/GCA_900156105.1_IMG-taxon_2706795025_annotated_assembly	-	ASpG1
Maribacter ulvicola	228959	PRJEB18845	360744	FCB group	Bacteroidetes/Chlorobi group	4.51147	35.2	-	FTMA01	24	3855	3763	1/14/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421797	GCA_900155985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/985/GCA_900155985.1_IMG-taxon_2681813549_annotated_assembly	-	DSM 15366
Rhodobacter vinaykumarii	407234	PRJEB18824	360795	Proteobacteria	Alphaproteobacteria	3.48168	68.3	-	FTOM01	27	3267	3131	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421795	GCA_900156695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/695/GCA_900156695.1_IMG-taxon_2681813513_annotated_assembly	-	DSM 18714
Pontibacter lucknowensis	1077936	PRJEB18896	360763	FCB group	Bacteroidetes/Chlorobi group	4.47406	50.1	-	FTNM01	19	3910	3833	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421545	GCA_900156415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/415/GCA_900156415.1_IMG-taxon_2681812905_annotated_assembly	-	DM9
Alicyclobacillus vulcanalis	252246	PRJEB18834	360754	Terrabacteria group	Firmicutes	2.99448	61.9	-	FTOO01	34	2926	2782	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421799	GCA_900156755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/755/GCA_900156755.1_IMG-taxon_2681813550_annotated_assembly	-	DSM 16176
Natronorubrum thiooxidans	308853	PRJEB18902	360705	Euryarchaeota	Halobacteria	4.20979	60.9	-	FTNR01	62	4123	3925	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421752	GCA_900156475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/475/GCA_900156475.1_IMG-taxon_2681812919_annotated_assembly	-	type strain: HArc-
Haladaptatus litoreus	553468	PRJEB18898	360765	Euryarchaeota	Halobacteria	4.67171	57	-	FTNO01	11	4804	4553	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421858	GCA_900156425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/425/GCA_900156425.1_IMG-taxon_2681812914_annotated_assembly	-	CGMCC 1.7737
Moraxella cuniculi DSM 21768	1122245	PRJEB18906	360699	Proteobacteria	Gammaproteobacteria	2.30337	44.3	-	FTNU01	47	2238	2133	1/14/17	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02745664	GCA_900156515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/515/GCA_900156515.1_IMG-taxon_2681812931_annotated_assembly	-	DSM 21768
Mycobacterium paraffinicum	53378	PRJNA338014	338014	Terrabacteria group	Actinobacteria	6.47531	67.6	-	MPNT01	85	6137	5876	12/9/16	4/17/17	Scaffold	UW	SAMN06034714	GCA_001907675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/675/GCA_001907675.1_ASM190767v1	-	M11
Burkholderia paludis	1506587	PRJNA251788	251788	Proteobacteria	Betaproteobacteria	8.63365	67.1	-	JPGL01	172	7845	7377	7/22/14	4/9/17	Contig	Monash University Malaysia	SAMN02840652	GCA_000732615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/615/GCA_000732615.1_ASM73261v1	25301661	MSh1
Aeromonas salmonicida	645	PRJNA391844	391844	Proteobacteria	Gammaproteobacteria	4.88082	58.4458	chromosome:NZ_CP022186.1/CP022186.1; plasmid pS68-1:NZ_CP022182.1/CP022182.1; plasmid pS68-2:NZ_CP022183.1/CP022183.1; plasmid pS68-3:NZ_CP022184.1/CP022184.1; plasmid pS68-4:NZ_CP022185.1/CP022185.1	-	5	4642	4132	7/3/17	7/5/17	Complete Genome	Institute of Microbiology Chinese Academy of Sciences	SAMN07276873	GCA_002214265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/265/GCA_002214265.1_ASM221426v1	-	S68
Exiguobacterium profundum	307643	PRJNA327611	327611	Terrabacteria group	Firmicutes	2.92071	48	-	MRSV01	23	2988	2857	12/19/16	4/17/17	Scaffold	ICAR-NBAIM	SAMN05353864	GCA_001909285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/285/GCA_001909285.1_ASM190928v1	-	PHM 11
Sphingorhabdus marina DSM 22363	1123272	PRJEB18143	355477	Proteobacteria	Alphaproteobacteria	3.54793	57.4	-	FSQW01	2	3474	3393	12/14/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02745824	GCA_900128895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/895/GCA_900128895.1_IMG-taxon_2582580503_annotated_assembly	-	DSM 22363
Chitinophaga niabensis	536979	PRJEB18198	355473	FCB group	Bacteroidetes/Chlorobi group	7.13008	46	-	FSRA01	6	5860	5744	12/14/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488055	GCA_900129465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/465/GCA_900129465.1_IMG-taxon_2636416022_annotated_assembly	-	DSM 24787
Singulisphaera sp. GP187	1882752	PRJEB18215	355499	PVC group	Planctomycetes	10.6892	63.1	-	FSRB01	5	8276	7841	12/14/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444166	GCA_900129635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/635/GCA_900129635.1_IMG-taxon_2695420965_annotated_assembly	-	GP187
Acetomicrobium flavidum	49896	PRJEB18216	355500	Synergistetes	Synergistia	2.0217	48.3	-	FSQZ01	3	1982	1892	12/14/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444368	GCA_900129645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/645/GCA_900129645.1_IMG-taxon_2695420966_annotated_assembly	-	DSM 20664
Algoriphagus halophilus	226505	PRJEB18230	355533	FCB group	Bacteroidetes/Chlorobi group	4.9785	39.4	-	FSRC01	8	4186	4110	12/14/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444394	GCA_900129785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/785/GCA_900129785.1_IMG-taxon_2698536714_annotated_assembly	-	DSM 15292
Halodesulfovibrio marinisediminis DSM 17456	1121457	PRJEB18249	355532	Proteobacteria	delta/epsilon subdivisions	3.71065	45	-	FSRG01	13	3286	3153	12/14/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745161	GCA_900129975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/975/GCA_900129975.1_IMG-taxon_2585428071_annotated_assembly	-	DSM 17456
Sulfurivirga caldicuralii	364032	PRJEB18288	355704	Proteobacteria	Gammaproteobacteria	1.67328	59.2	-	FSRE01	7	1686	1620	12/14/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443662	GCA_900141795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/795/GCA_900141795.1_IMG-taxon_2695421043_annotated_assembly	-	DSM 17737
Chryseobacterium zeae	1416779	PRJEB18289	355705	FCB group	Bacteroidetes/Chlorobi group	4.07957	35.1	-	FSRK01	4	3726	3652	12/14/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444409	GCA_900141765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/765/GCA_900141765.1_IMG-taxon_2695421044_annotated_assembly	-	DSM 27623
Agromyces cerinus subsp. cerinus	232089	PRJEB18316	355772	Terrabacteria group	Actinobacteria	4.18751	70	-	FSRJ01	8	3887	3788	12/14/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443544	GCA_900142065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/065/GCA_900142065.1_IMG-taxon_2698536811_annotated_assembly	-	DSM 8595
Oceanicola litoreus	1217970	PRJEB18339	355755	Proteobacteria	Alphaproteobacteria	4.09546	67.6	-	FSRL01	3	4036	3949	12/14/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444002	GCA_900142295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/295/GCA_900142295.1_IMG-taxon_2698536701_annotated_assembly	-	DSM 29440
Chryseobacterium scophthalmum	59733	PRJEB18424	355822	FCB group	Bacteroidetes/Chlorobi group	4.46839	33.5	-	FSRQ01	9	4093	3984	12/14/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421769	GCA_900143185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/185/GCA_900143185.1_IMG-taxon_2690315624_annotated_assembly	-	DSM 16779
Micromonospora cremea	709881	PRJEB18517	356534	Terrabacteria group	Actinobacteria	7.75967	71.5	-	FSQT01	2	7251	6729	12/14/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04489832	GCA_900143515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/515/GCA_900143515.1_IMG-taxon_2630968262_annotated_assembly	-	DSM 45599
Proteiniborus sp. DW1	1889883	PRJEB15122	357888	Terrabacteria group	Firmicutes	3.12065	32.4	-	FMDO01	62	2972	2887	12/16/16	4/16/17	Contig	CEBITEC	SAMEA4379703	GCA_900095305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/305/GCA_900095305.1_DW1	-	-
Jonesia denitrificans	43674	PRJNA231221	231221	Terrabacteria group	Actinobacteria	2.7887	58.4	chromosome:NZ_CP022038.1/CP022038.1	-	1	2651	2497	6/27/17	6/29/17	Complete Genome	US Food and Drug Administration 	SAMN06173314	GCA_002209145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/145/GCA_002209145.1_ASM220914v1	-	FDAARGOS_301
Neptuniibacter marinus	1806670	PRJNA312822	312822	Proteobacteria	Gammaproteobacteria	3.45419	42.8	-	LUTR01	117	3212	3115	3/25/16	4/12/17	Contig	Universidad de Santiago de Compostela	SAMN04506967	GCA_001597725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/725/GCA_001597725.1_ASM159772v1	-	ATR 1.1
Neptuniibacter pectenicola	1806669	PRJNA312821	312821	Proteobacteria	Gammaproteobacteria	3.63189	45.7	-	LUTS01	203	3374	3283	3/25/16	4/12/17	Contig	Universidad de Santiago de Compostela	SAMN04506932	GCA_001597735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/735/GCA_001597735.1_ASM159773v1	-	LFT 1.8
Paenibacillus mucilaginosus KNP414	1036673	PRJNA67335	67335	Terrabacteria group	Firmicutes	8.66382	58.4	chromosome:NC_015690.1/CP002869.1	-	1	7296	6970	6/17/11	5/19/17	Complete Genome	"College of Life Sciences, Zhejiang Sci-Tech University"	SAMN02603153	GCA_000218915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/915/GCA_000218915.1_ASM21891v1	24158556	KNP414
Desulfobulbaceae bacterium DB1	1920419	PRJNA173069	173069	Proteobacteria	delta/epsilon subdivisions	3.86818	53.8	-	MQUF01	28	3630	3494	12/23/16	12/23/16	Contig	J Craig Venter Institute	SAMN05991844	GCA_001914235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/235/GCA_001914235.1_ASM191423v1	-	-
Comamonadaceae bacterium BIN2	1927146	PRJNA356961	356961	Proteobacteria	Betaproteobacteria	2.63818	64.1	-	MRWK01	802	-	-	12/23/16	12/23/16	Contig	University of KwaZulu-Natal	SAMN06130430	GCA_001914295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/295/GCA_001914295.1_ASM191429v1	-	-
Thaumarchaeota archaeon BIN5	1927150	PRJNA356961	356961	TACK group	Thaumarchaeota	1.27819	40.7	-	MRWN01	600	-	-	12/23/16	12/23/16	Contig	University of KwaZulu-Natal	SAMN06130433	GCA_001914355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/355/GCA_001914355.1_ASM191435v1	-	-
Candidatus Methanohalarchaeum thermophilum	1903181	PRJNA357090	357090	Euryarchaeota	Methanonatronarchaeia	2.14131	35.4	-	MSDW01	4	2208	2167	12/23/16	12/23/16	Contig	National Center for Biotechnology Information	SAMN05770050	GCA_001914405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/405/GCA_001914405.1_ASM191440v1	-	-
Candidatus Methylomirabilis sp. BIN6	1927149	PRJNA356961	356961	unclassified Bacteria	Bacteria candidate phyla	1.64167	58.3	-	MRWO01	736	-	-	12/23/16	12/23/16	Contig	University of KwaZulu-Natal	SAMN06130434	GCA_001914375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/375/GCA_001914375.1_ASM191437v1	-	-
Anoxybacillus mongoliensis	452565	PRJNA356103	356103	Terrabacteria group	Firmicutes	2.80752	41.7	-	MRZM01	93	3012	2798	12/23/16	4/17/17	Contig	"Indian Institute of Science Education and Research, Bhopal"	SAMN05449942	GCA_001914435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/435/GCA_001914435.1_ASM191443v1	-	MB4
Candidatus Rokubacteria bacterium 13_2_20CM_69_15_2	1805373	PRJNA297196	297196	unclassified Bacteria	Bacteria candidate phyla	1.25673	69.6	-	MNCQ01	115	1364	1225	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327827	GCA_001914455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/455/GCA_001914455.1_ASM191445v1	27843720	-
Candidatus Rokubacteria bacterium 13_2_20CM_70_12	1805374	PRJNA297196	297196	unclassified Bacteria	Bacteria candidate phyla	1.76851	70	-	MNCP01	161	1864	1663	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327816	GCA_001914465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/465/GCA_001914465.1_ASM191446v1	27843720	-
Verrucomicrobia bacterium 13_2_20CM_55_10	1805420	PRJNA297196	297196	PVC group	Verrucomicrobia	2.14718	54.6	-	MNCN01	138	2203	1985	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327826	GCA_001914475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/475/GCA_001914475.1_ASM191447v1	27843720	-
Verrucomicrobia bacterium 13_2_20CM_54_12	1805419	PRJNA297196	297196	PVC group	Verrucomicrobia	2.72336	54.3	-	MNCO01	162	2680	2456	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327815	GCA_001914485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/485/GCA_001914485.1_ASM191448v1	27843720	-
Candidatus Rokubacteria bacterium 13_2_20CM_69_15_1	1805372	PRJNA297196	297196	unclassified Bacteria	Bacteria candidate phyla	2.80159	69.6	-	MNCR01	146	2829	2630	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327821	GCA_001914535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/535/GCA_001914535.1_ASM191453v1	27843720	-
Nitrospirae bacterium 13_2_20CM_62_7	1805275	PRJNA297196	297196	Nitrospirae	unclassified Nitrospirae	1.43256	61.9	-	MNCT01	107	1424	1236	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327828	GCA_001914545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/545/GCA_001914545.1_ASM191454v1	27843720	-
Candidatus Rokubacteria bacterium 13_2_20CM_69_10	1805371	PRJNA297196	297196	unclassified Bacteria	Bacteria candidate phyla	2.21423	68.8	-	MNCS01	111	2316	2123	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327825	GCA_001914555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/555/GCA_001914555.1_ASM191455v1	27843720	-
Gemmatimonadetes bacterium 13_2_20CM_70_9	1805207	PRJNA297196	297196	FCB group	Gemmatimonadetes	2.26588	69.8	-	MNCU01	136	2188	1941	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327814	GCA_001914565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/565/GCA_001914565.1_ASM191456v1	27843720	-
Gemmatimonadetes bacterium 13_2_20CM_69_8	1805206	PRJNA297196	297196	FCB group	Gemmatimonadetes	1.83619	69.1	-	MNCV01	128	1840	1599	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327819	GCA_001914615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/615/GCA_001914615.1_ASM191461v1	27843720	-
Gemmatimonadetes bacterium 13_2_20CM_69_27	1805205	PRJNA297196	297196	FCB group	Gemmatimonadetes	2.7165	69.2	-	MNCW01	132	2544	2370	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327813	GCA_001914625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/625/GCA_001914625.1_ASM191462v1	27843720	-
Gemmatimonadetes bacterium 13_2_20CM_1_70_33	1805201	PRJNA297196	297196	FCB group	Gemmatimonadetes	0.474769	69.8	-	MNCX01	172	463	363	12/23/16	12/23/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04327829	GCA_001914635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/635/GCA_001914635.1_ASM191463v1	27843720	-
Gemmatimonadetes bacterium 13_2_20CM_1_69_27	1805200	PRJNA297196	297196	FCB group	Gemmatimonadetes	0.349567	69.2	-	MNCY01	126	317	242	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327830	GCA_001914645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/645/GCA_001914645.1_ASM191464v1	27843720	-
Gammaproteobacteria bacterium 13_2_20CM_66_19	1805166	PRJNA297196	297196	Proteobacteria	Gammaproteobacteria	3.13567	68.2	-	MNCZ01	136	2889	2717	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327817	GCA_001914695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/695/GCA_001914695.1_ASM191469v1	27843720	-
Actinobacteria bacterium 13_2_20CM_68_14	1803496	PRJNA297196	297196	Terrabacteria group	Actinobacteria	1.56927	68.2	-	MNDB01	116	1702	1551	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327824	GCA_001914705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/705/GCA_001914705.1_ASM191470v1	27843720	-
Acidobacteria bacterium 13_2_20CM_58_27	1803466	PRJNA297196	297196	Acidobacteria	unclassified Acidobacteria	7.41296	58	-	MNDC01	205	6339	6091	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327820	GCA_001914735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/735/GCA_001914735.1_ASM191473v1	27843720	-
Ktedonobacter sp. 13_2_20CM_53_11	1805233	PRJNA297196	297196	Terrabacteria group	Chloroflexi	5.04478	53.5	-	MNDA01	671	4572	4015	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327812	GCA_001914715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/715/GCA_001914715.1_ASM191471v1	27843720	-
Domibacillus antri	1714264	PRJNA357183	357183	Terrabacteria group	Firmicutes	3.19151	43.9	-	MSDU01	79	3341	3184	1/5/17	4/16/17	Contig	CSIR-Institute of Microbial Technology	SAMN06134631	GCA_001936625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/625/GCA_001936625.1_ASM193662v1	-	XD80
Salinicola socius	404433	PRJNA357614	357614	Proteobacteria	Gammaproteobacteria	4.17412	62.2	-	MSDO01	156	3749	3625	1/5/17	4/17/17	Contig	University of Southern Mississippi	SAMN06145960	GCA_001937195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/195/GCA_001937195.1_ASM193719v1	-	SMB35
Melaminivora alkalimesophila	1165852	PRJNA168652	168652	Proteobacteria	Betaproteobacteria	3.00778	69.5	-	ALEE01	836	3040	2525	7/30/12	4/7/17	Contig	"Institute of Urban Environment, Chinese Academy of Sciences"	SAMN02470048	GCA_000282995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/995/GCA_000282995.1_CRZ1	24591424	CY1
Murdochiella massiliensis	1673723	PRJEB12696	311687	Terrabacteria group	Firmicutes	1.6423	49	-	FIZW01	2	1492	1411	2/16/16	4/12/17	Contig	URMITE	SAMEA3869489	GCA_900059565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/565/GCA_900059565.1_PRJEB12696	-	SIT12
Burkholderia humptydooensis	430531	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.78512	67.473	chromosome 1:NZ_CM003626.1/CM003626.1; chromosome 2:NZ_CM003627.1/CM003627.1	LNPD01	4	6471	5891	12/3/15	4/10/17	Chromosome	Northern Arizona University	SAMN03449261	GCA_001462435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/435/GCA_001462435.1_ASM146243v1	-	MSMB122
Rhizobium taibaishanense	887144	PRJNA344720	344720	Proteobacteria	Alphaproteobacteria	5.41802	59.3	-	MKIN01	28	4898	4769	1/6/17	4/17/17	Scaffold	Chinese Academy of Agricultural Sciences	SAMN05832037	GCA_001938985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/985/GCA_001938985.1_ASM193898v1	-	14971
Rhizobium oryziradicis	1867956	PRJNA344576	344576	Proteobacteria	Alphaproteobacteria	5.15625	55.1	-	MKIM01	33	4699	4561	1/6/17	4/16/17	Scaffold	Chinese Academy of Agricultural Sciences	SAMN05829247	GCA_001939045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/045/GCA_001939045.1_ASM193904v1	-	N19
Paenisporosarcina indica	650093	PRJNA252797	252797	Terrabacteria group	Firmicutes	3.61033	38.5	-	MPTA01	19	3518	3361	1/6/17	4/17/17	Contig	Centre for Cellular and Molecular Biology	SAMN02863087	GCA_001939075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/075/GCA_001939075.1_ASM193907v1	-	PN2
Leptolyngbya sp. 'hensonii'	1922337	PRJNA355315	355315	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.94003	52.3	-	MQTZ01	77	5318	5048	1/6/17	4/16/17	Contig	University of Cincinnati	SAMN06074267	GCA_001939115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/115/GCA_001939115.1_ASM193911v1	-	hensonii
Neisseria arctica	1470200	PRJNA267012	267012	Proteobacteria	Betaproteobacteria	2.39798	46.4	-	JTDO01	275	2190	2091	6/14/15	4/10/17	Contig	University of Alaska Fairbanks	SAMN03177367	GCA_001027865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/865/GCA_001027865.1_ASM102786v1	26184936	KH1503
Xenorhabdus eapokensis	1873482	PRJNA328576	328576	Proteobacteria	Gammaproteobacteria	4.24675	43.5	-	MKGQ01	212	3945	3617	12/19/16	4/16/17	Scaffold	Goethe University	SAMN05375127	GCA_001908105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/105/GCA_001908105.1_ASM190810v1	-	DL20
Xenorhabdus thuongxuanensis	1873484	PRJNA328578	328578	Proteobacteria	Gammaproteobacteria	3.9383	43.1	-	MKGR01	130	3609	3353	12/19/16	4/16/17	Scaffold	Goethe University	SAMN05375129	GCA_001908095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/095/GCA_001908095.1_ASM190809v1	-	30TX1
Vibrio panuliri	1381081	PRJNA343920	343920	Proteobacteria	Gammaproteobacteria	4.73713	45.1	-	MJMJ01	47	4304	4181	1/9/17	4/16/17	Contig	"CIAD, A.C."	SAMN05804985	GCA_001939725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/725/GCA_001939725.1_ASM193972v1	-	CAIM 703
Leucobacter celer subsp. astrifaciens	1461260	PRJNA240071	240071	Terrabacteria group	Actinobacteria	4.14117	69.1	-	JHEI01	235	3577	3463	8/25/15	4/16/17	Contig	University of Oxford	SAMN02673064	GCA_001273835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/835/GCA_001273835.1_CBX151_1.0	26275616	CBX151
Jonesia denitrificans DSM 20603	471856	PRJNA20833	20833	Terrabacteria group	Actinobacteria	2.74965	58.4	chromosome:NC_013174.1/CP001706.1	-	1	2571	2469	8/27/09	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598439	GCA_000024065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/065/GCA_000024065.1_ASM2406v1	21304666	DSM 20603
Candidatus Hodgkinia cicadicola Dsem	573234	PRJNA32135	32135	Proteobacteria	Alphaproteobacteria	0.143795	58.4	chromosome:CP001226.1	-	1	188	169	7/13/09	1/31/14	Complete Genome	University of Arizona	SAMN02604136	GCA_000021505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/505/GCA_000021505.1_ASM2150v1	-	Dsem
Vibrio mexicanus	1004326	PRJNA275160	275160	Proteobacteria	Gammaproteobacteria	4.8114	45.1	-	JYJP01	147	4477	3484	5/22/15	4/17/17	Contig	"CIAD, A.C. Mazatlan Unit for Aquaculture"	SAMN03339753	GCA_001012815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/815/GCA_001012815.1_ASM101281v1	26021481	CAIM 1540
Bacillus solani	1637975	PRJNA294849	294849	Terrabacteria group	Firmicutes	5.3156	37.5	-	LJIX01	12	5381	5071	10/30/15	4/11/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04038043	GCA_001420595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/595/GCA_001420595.1_ASM142059v1	-	FJAT-18043
Rheinheimera salexigens	1628148	PRJNA344372	344372	Proteobacteria	Gammaproteobacteria	3.44188	42	-	MKEK01	2	3175	3041	10/4/16	4/13/17	Scaffold	University of Hawaii at Manoa	SAMN05821304	GCA_001752395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/395/GCA_001752395.1_ASM175239v1	27979942	KH87
Anthococcus sp. DF1	1859473	PRJNA340982	340982	Terrabacteria group	Firmicutes	2.15776	33	-	MKIR01	26	2209	2140	10/13/16	4/13/17	Contig	"School of Industrial Technology, Universiti Sains Malaysia"	SAMN05831614	GCA_001832905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/905/GCA_001832905.1_ASM183290v1	-	DF1
Candidatus Koribacter versatilis Ellin345	204669	PRJNA15771	15771	Acidobacteria	Acidobacteriia	5.65037	58.4	chromosome:NC_008009.1/CP000360.1	-	1	4975	4900	5/4/06	5/18/17	Complete Genome	DOE Joint Genome Institute	SAMN02598354	GCA_000014005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/005/GCA_000014005.1_ASM1400v1	19201974	Ellin345
Neptunomonas phycophila	1572645	PRJNA356205	356205	Proteobacteria	Gammaproteobacteria	3.8765	45.5	-	MRCI01	27	3568	3462	12/28/16	4/16/17	Contig	University of Santiago de Compostela	SAMN06109290	GCA_001922575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/575/GCA_001922575.1_ASM192257v1	-	CECT 8716
Rhodocista sp. MIMtkB3	1709002	PRJNA351793	351793	Proteobacteria	Alphaproteobacteria	6.06542	70.2	-	MOEB01	332	5451	5199	1/9/17	4/17/17	Contig	Inner Mongolia Agricultural University	SAMN05954534	GCA_001939945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/945/GCA_001939945.1_ASM193994v1	-	MIMtkB3
Actinokineospora bangkokensis	1193682	PRJNA345323	345323	Terrabacteria group	Actinobacteria	7.45371	74	-	MKQR01	32	6441	6154	1/9/17	4/17/17	Scaffold	University of Freiburg	SAMN05860870	GCA_001940455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/455/GCA_001940455.1_ASM194045v1	-	44EHW
Tissierella creatinophila DSM 6911	1123403	PRJNA313166	313166	Terrabacteria group	Firmicutes	2.53046	30.7	-	LTDM01	66	2554	2445	1/9/17	4/17/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04516209	GCA_001940565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/565/GCA_001940565.1_ASM194056v1	-	DSM 6911
Actinophytocola xanthii	1912961	PRJNA350569	350569	Terrabacteria group	Actinobacteria	8.34563	71.7	-	MSIE01	204	7577	7226	12/23/16	4/17/17	Contig	"North China University of Science and Technology, Tangshan China"	SAMN05942569	GCA_001921205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/921/205/GCA_001921205.1_ASM192120v1	-	11-183
Candidatus Heimdallarchaeota archaeon LC_3	1841598	PRJNA319486	319486	Asgard group	Candidatus Heimdallarchaeota	5.68404	29.7	-	MDVS01	157	5541	5514	1/10/17	1/18/17	Contig	Uppsala University	SAMN04924817	GCA_001940645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/645/GCA_001940645.1_ASM194064v1	28077874	-
Candidatus Odinarchaeota archaeon LCB_4	1841599	PRJNA319486	319486	Asgard group	Candidatus Odinarchaeota	1.46071	38.1	-	MDVT01	9	1620	1584	1/10/17	1/18/17	Contig	Uppsala University	SAMN04924820	GCA_001940665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/665/GCA_001940665.1_ASM194066v1	28077874	-
Candidatus Heimdallarchaeota archaeon LC_2	1841597	PRJNA319486	319486	Asgard group	Candidatus Heimdallarchaeota	4.84359	32.6	-	MDVR01	177	4625	4586	1/10/17	1/18/17	Contig	Uppsala University	SAMN04924815	GCA_001940725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/725/GCA_001940725.1_ASM194072v1	28077874	-
Candidatus Thorarchaeota archaeon AB_25	1837170	PRJNA319486	319486	Asgard group	Candidatus Thorarchaeota	2.85565	44.6	-	MEHG01	264	2952	2914	1/10/17	1/18/17	Contig	Uppsala University	SAMN04924819	GCA_001940705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/705/GCA_001940705.1_ASM194070v1	28077874	-
Candidatus Heimdallarchaeota archaeon AB_125	1841596	PRJNA319486	319486	Asgard group	Candidatus Heimdallarchaeota	2.27869	33.4	-	MEHH01	225	2382	2348	1/10/17	1/18/17	Contig	Uppsala University	SAMN04924818	GCA_001940755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/755/GCA_001940755.1_ASM194075v1	28077874	-
Candidatus Lokiarchaeota archaeon CR_4	1849166	PRJNA288027	288027	Asgard group	Candidatus Lokiarchaeota	4.33417	44	-	MBAA01	239	4431	4413	1/10/17	1/10/17	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04958229	GCA_001940655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/655/GCA_001940655.1_ASM194065v1	28077874	-
Methanocorpusculaceae archaeon Phil4	1930022	PRJNA357304	357304	Euryarchaeota	Methanomicrobia	1.96533	52.8	-	MSGU01	102	-	-	1/10/17	1/10/17	Scaffold	University of Queensland	SAMN06140811	GCA_001940805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/805/GCA_001940805.1_ASM194080v1	-	-
Christensenellaceae bacterium Phil7	1930013	PRJNA357304	357304	Terrabacteria group	Firmicutes	2.21367	46.2	-	MSGV01	45	-	-	1/10/17	1/10/17	Scaffold	University of Queensland	SAMN06140814	GCA_001940845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/845/GCA_001940845.1_ASM194084v1	-	-
Christensenellaceae bacterium Phil1	1930012	PRJNA357304	357304	Terrabacteria group	Firmicutes	2.84802	52.2	-	MSGS01	78	-	-	1/10/17	1/10/17	Scaffold	University of Queensland	SAMN06140808	GCA_001940855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/855/GCA_001940855.1_ASM194085v1	-	-
Succinivibrio sp. Phil9	1929997	PRJNA357304	357304	Proteobacteria	Gammaproteobacteria	2.30699	36.8	-	MSGX01	58	-	-	1/10/17	1/10/17	Scaffold	University of Queensland	SAMN06140816	GCA_001940885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/885/GCA_001940885.1_ASM194088v1	-	-
Christensenellaceae bacterium Phil10	1930014	PRJNA357304	357304	Terrabacteria group	Firmicutes	1.01531	46.7	-	MSGY01	25	-	-	1/10/17	1/10/17	Scaffold	University of Queensland	SAMN06140817	GCA_001940895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/895/GCA_001940895.1_ASM194089v1	-	-
Mollicutes bacterium Phil14	1930023	PRJNA357304	357304	Terrabacteria group	Tenericutes	1.68558	28.5	-	MSHB01	26	-	-	1/10/17	1/10/17	Scaffold	University of Queensland	SAMN06140821	GCA_001940985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/985/GCA_001940985.1_ASM194098v1	-	-
Lachnospiraceae bacterium Zagget3	1930016	PRJNA357304	357304	Terrabacteria group	Firmicutes	1.61246	55.8	-	MSHE01	37	-	-	1/10/17	1/10/17	Scaffold	University of Queensland	SAMN06140825	GCA_001941025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/025/GCA_001941025.1_ASM194102v1	-	-
Lachnospiraceae bacterium Zagget2	1930015	PRJNA357304	357304	Terrabacteria group	Firmicutes	3.33891	52.8	-	MSHD01	66	-	-	1/10/17	1/10/17	Scaffold	University of Queensland	SAMN06140824	GCA_001941045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/045/GCA_001941045.1_ASM194104v1	-	-
Oscillospiraceae bacterium Zagget6	1930019	PRJNA357304	357304	Terrabacteria group	Firmicutes	1.97774	58.4	-	MSHH01	86	-	-	1/10/17	1/10/17	Scaffold	University of Queensland	SAMN06140835	GCA_001941075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/075/GCA_001941075.1_ASM194107v1	-	-
Lachnospiraceae bacterium Zagget13	1930017	PRJNA357304	357304	Terrabacteria group	Firmicutes	3.30185	49.5	-	MSHN01	300	-	-	1/10/17	1/10/17	Scaffold	University of Queensland	SAMN06140842	GCA_001941125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/125/GCA_001941125.1_ASM194112v1	-	-
Oscillospiraceae bacterium Zagget4	1930018	PRJNA357304	357304	Terrabacteria group	Firmicutes	2.36065	60.6	-	MSHF01	82	-	-	1/10/17	1/10/17	Scaffold	University of Queensland	SAMN06140826	GCA_001941165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/165/GCA_001941165.1_ASM194116v1	-	-
Rhodocyclaceae bacterium Zagget5	1930021	PRJNA357304	357304	Proteobacteria	Betaproteobacteria	2.83167	56.5	-	MSHG01	88	-	-	1/10/17	1/10/17	Scaffold	University of Queensland	SAMN06140834	GCA_001941185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/185/GCA_001941185.1_ASM194118v1	-	-
Oscillospiraceae bacterium Zagget12	1930020	PRJNA357304	357304	Terrabacteria group	Firmicutes	1.90406	45.8	-	MSHM01	44	-	-	1/10/17	1/10/17	Scaffold	University of Queensland	SAMN06140841	GCA_001941225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/225/GCA_001941225.1_ASM194122v1	-	-
Pseudomonas syringae pv. actinidiae ICMP 18708	1104679	PRJNA74965	74965	Proteobacteria	Gammaproteobacteria	6.63	58.3731	chromosome:NZ_CP012179.1/CP012179.1; plasmid unnamed:NZ_CP012180.1/CP012180.1	-	2	6350	5760	8/23/16	3/28/17	Complete Genome	University of Otago	SAMN02471917	GCA_000344355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/355/GCA_000344355.2_ASM34435v2	23555547	ICMP 18708
Pseudomonas syringae pv. actinidiae ICMP 18884	1095103	PRJNA71845	71845	Proteobacteria	Gammaproteobacteria	6.62999	58.3731	chromosome:NZ_CP011972.2/CP011972.2; plasmid unnamed:NZ_CP011973.1/CP011973.1	-	2	6350	5758	7/30/15	3/28/17	Complete Genome	The New Zealand Institute for Plant & Food Research	SAMN02727983	GCA_000648735.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/735/GCA_000648735.3_ASM64873v3	"2,393,548,426,383,660"	ICMP 18884
Pseudomonas syringae pv. actinidiae	103796	PRJNA374400	374400	Proteobacteria	Gammaproteobacteria	6.62001	58.373	chromosome:NZ_CP019730.1/CP019730.1; plasmid unnamed:NZ_CP019731.1/CP019731.1	-	2	6322	5726	3/9/17	3/11/17	Complete Genome	University of Udine	SAMN06323270	GCA_002024285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/285/GCA_002024285.1_ASM202428v1	-	CRAFRU 12.29
Pseudomonas syringae pv. actinidiae	103796	PRJNA374400	374400	Proteobacteria	Gammaproteobacteria	6.62049	58.373	chromosome:NZ_CP019732.1/CP019732.1; plasmid unnamed:NZ_CP019733.1/CP019733.1	-	2	6329	5730	3/9/17	3/11/17	Complete Genome	University of Udine	SAMN06323273	GCA_002024305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/305/GCA_002024305.1_ASM202430v1	-	CRAFRU 14.08
Pseudomonas syringae pv. actinidiae	103796	PRJNA339321	339321	Proteobacteria	Gammaproteobacteria	6.74112	58.3729	chromosome:NZ_CP017007.1/CP017007.1; plasmid pPsa20586:NZ_CP017008.1/CP017008.1	-	2	6467	5866	12/21/16	3/28/17	Complete Genome	New Zealand Institute for Plant and Food Research	SAMN05589874	GCA_001913215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/215/GCA_001913215.1_ASM191321v1	-	NZ-45
Edwardsiella anguillarum ET080813	667120	PRJNA39899	39899	Proteobacteria	Gammaproteobacteria	4.32965	58.3656	chromosome:NZ_CP006664.1/CP006664.1; plasmid 1:NZ_CP006665.1/CP006665.1; plasmid 2:NZ_CP006666.1/CP006666.1	-	3	4023	3743	8/12/14	9/10/17	Complete Genome	"State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology"	SAMN02469761	GCA_000264765.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/765/GCA_000264765.2_ASM26476v2	22590641	ET080813
Sporomusa sphaeroides DSM 2875	1337886	PRJNA310725	310725	Terrabacteria group	Firmicutes	4.97138	47.2	-	LSLJ01	15	4656	4463	1/10/17	4/17/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04455154	GCA_001941975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/975/GCA_001941975.1_ASM194197v1	-	DSM 2875
Ornithinimicrobium sp. CNJ-824	1904966	PRJNA344658	344658	Terrabacteria group	Actinobacteria	3.44505	73	-	MKKA01	62	3248	2629	1/11/17	4/17/17	Scaffold	"Scripps Institution of Oceanography, UCSD"	SAMN05830209	GCA_001942405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/405/GCA_001942405.1_ASM194240v1	27902408	CNJ-824
Actinomadura sp. CNU-125	1904961	PRJNA344658	344658	Terrabacteria group	Actinobacteria	9.95624	72.5	-	MKJY01	603	9845	7452	1/11/17	4/17/17	Scaffold	"Scripps Institution of Oceanography, UCSD"	SAMN05830207	GCA_001942465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/465/GCA_001942465.1_ASM194246v1	27902408	CNU-125
Moorea bouillonii PNG	568701	PRJNA345362	345362	Terrabacteria group	Cyanobacteria/Melainabacteria group	8.3191	43.7	-	MKZS01	13	6723	6042	1/11/17	4/6/17	Scaffold	UCSD	SAMN05826285	GCA_001942495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/495/GCA_001942495.1_ASM194249v1	-	PNG5-198
Ileibacterium valens	1862668	PRJNA353002	353002	Terrabacteria group	Firmicutes	2.74057	40.9	-	MPJW01	291	2580	2260	1/11/17	4/16/17	Contig	Brigham and Women's Hospital	SAMN06007747	GCA_001945525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/525/GCA_001945525.1_ASM194552v1	-	NYU-BL-A3
Erysipelotrichaceae bacterium NYU-BL-F16	1917462	PRJNA353002	353002	Terrabacteria group	Firmicutes	2.74371	40.9	-	MPJX01	301	2582	2267	1/11/17	4/16/17	Contig	Brigham and Women's Hospital	SAMN06008050	GCA_001945545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/545/GCA_001945545.1_ASM194554v1	-	NYU-BL-F16
Erysipelotrichaceae bacterium NYU-BL-E8	1917463	PRJNA353002	353002	Terrabacteria group	Firmicutes	2.74127	40.9	-	MPJY01	293	2571	2261	1/11/17	4/16/17	Contig	Brigham and Women's Hospital	SAMN06008049	GCA_001945555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/555/GCA_001945555.1_ASM194555v1	-	NYU-BL-E8
Dubosiella newyorkensis	1862672	PRJNA353002	353002	Terrabacteria group	Firmicutes	2.25464	42.4	-	MPKA01	148	2336	2186	1/11/17	4/16/17	Contig	Brigham and Women's Hospital	SAMN06008016	GCA_001945605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/605/GCA_001945605.1_ASM194560v1	-	NYU-BL-A4
Carboxydothermus pertinax	870242	PRJDB5311	357237	Terrabacteria group	Firmicutes	2.46564	40.7	-	BDJK01	96	2626	2476	12/10/16	8/22/17	Scaffold	"Laboratory of Marine Microbiology, Graduate School of Agriculture, Kyoto University"	SAMD00066805	GCA_001950255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/255/GCA_001950255.1_ASM195025v1	28232442	Ug1
Carboxydothermus islandicus	661089	PRJDB5312	357238	Terrabacteria group	Firmicutes	2.3866	42	-	BDJL01	142	2498	2368	12/10/16	8/22/17	Scaffold	"Laboratory of Marine Microbiology, Graduate School of Agriculture, Kyoto University"	SAMD00066806	GCA_001950325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/325/GCA_001950325.1_ASM195032v1	28232442	SET
Coriobacteriaceae bacterium EMTCatB1	1927122	PRJDB5370	358504	Terrabacteria group	Actinobacteria	1.83861	67.2	-	BDLO01	1	1660	1660	12/21/16	3/15/17	Contig	"Department of System Innovation, Graduate School of Engineering, the University of Tokyo, Tokyo, Japan"	SAMD00069265	GCA_001950395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/395/GCA_001950395.1_ASM195039v1	-	-
Natronomonas sp. CBA1134	1906246	PRJDB5200	345591	Euryarchaeota	Halobacteria	2.57436	65.4	-	BDJH01	2	2707	2620	12/7/16	3/22/17	Contig	Korea Basic Science Institute	SAMD00064366	GCA_001950595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/595/GCA_001950595.1_ASM195059v1	-	CBA1134
Erythrobacter atlanticus	1648404	PRJNA241282	241282	Proteobacteria	Alphaproteobacteria	3.22636	58.3525	chromosome:NZ_CP011310.1/CP011310.1; plasmid unnamed:NZ_CP015441.1/CP015441.1	-	2	3147	3034	7/14/15	4/12/17	Complete Genome	The Third Institute of State Oceanic Administration	SAMN03565637	GCA_001077815.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/815/GCA_001077815.2_ASM107781v2	26220886	s21-N3
Rhizobium hainanense	52131	PRJEB14984	336136	Proteobacteria	Alphaproteobacteria	7.25262	59.6	-	FMAC01	31	6810	6638	8/3/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487811	GCA_900094555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/555/GCA_900094555.1_IMG-taxon_2615840609_annotated_assembly	-	CCBAU 57015
[Pseudomonas syringae] pv. tomato str. DC3000	223283	PRJNA359	359	Proteobacteria	Gammaproteobacteria	6.53826	58.3401	chromosome:NC_004578.1/AE016853.1; plasmid pDC3000A:NC_004633.1/AE016855.1; plasmid pDC3000B:NC_004632.1/AE016854.1	-	3	5842	5619	3/5/03	8/3/16	Complete Genome	TIGR	SAMN02604017	GCA_000007805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/805/GCA_000007805.1_ASM780v1	12928499	DC3000
Limnothrix rosea IAM M-220	454133	PRJNA347433	347433	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.06564	45.3787	plasmid pNIES208a:NZ_CM007612.1/CM007612.1; plasmid pNIES208b:NZ_CM007613.1/CM007613.1; plasmid pNIES208c:NZ_CM007614.1/CM007614.1	MRBY01	92	3654	3540	12/14/16	4/17/17	Scaffold	"Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences"	SAMN05890674	GCA_001904615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/615/GCA_001904615.1_ASM190461v1	-	IAM M-220
Pseudomonas syringae pv. actinidiae	103796	PRJNA339322	339322	Proteobacteria	Gammaproteobacteria	6.67628	58.3297	chromosome:NZ_CP017009.1/CP017009.1; plasmid pPsa22180a:NZ_CP017010.1/CP017010.1; plasmid pPsa22180b:NZ_CP017011.1/CP017011.1	-	3	6417	5823	12/21/16	3/28/17	Complete Genome	New Zealand Institute for Plant and Food Research	SAMN05589875	GCA_001913235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/235/GCA_001913235.1_ASM191323v1	-	NZ-47
Intestinimonas massiliensis	1673721	PRJEB9829	289473	Terrabacteria group	Firmicutes	3.10513	60.7	-	CWJP01	7	3066	2935	7/9/15	8/21/17	Scaffold	URMITE	SAMEA3481237	GCA_001244995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/995/GCA_001244995.1_Intestinimonas_massiliensis	-	GD2
Vaginella massiliensis	1816680	PRJEB14257	324470	FCB group	Bacteroidetes/Chlorobi group	2.43448	38.2	-	FLMR01	9	2349	2211	6/7/16	8/21/17	Scaffold	URMITE	SAMEA4022020	GCA_900089075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/075/GCA_900089075.1_PRJEB14257	-	Marseille-P2517
Streptococcus timonensis	1852387	PRJEB15309	341974	Terrabacteria group	Firmicutes	1.92533	38.6	-	FMIX01	4	2079	1932	9/7/16	4/13/17	Contig	URMITE	SAMEA4415361	GCA_900095845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/845/GCA_900095845.1_PRJEB15309	-	Marseille-P2915
Acidaminococcus massiliensis	1852375	PRJEB15304	341971	Terrabacteria group	Firmicutes	2.67	53.5	-	FMIW01	4	2479	2327	9/7/16	4/13/17	Scaffold	URMITE	SAMEA4415163	GCA_900095825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/825/GCA_900095825.1_PRJEB15304	-	Marseille-P2828
Bacillus massiliglaciei	1816693	PRJEB15625	345445	Terrabacteria group	Firmicutes	4.14572	42	-	FMSO01	19	-	-	10/5/16	10/5/16	Scaffold	URMITE	SAMEA4478607	GCA_900098925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/925/GCA_900098925.1_PRJEB15625	-	Marseille-P2600
Acidaminococcus timonensis	1871002	PRJEB16534	349855	Terrabacteria group	Firmicutes	2.29706	55.4	-	FNWH01	6	2166	2050	10/27/16	4/13/17	Contig	URMITE	SAMEA4521271	GCA_900106585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/585/GCA_900106585.1_PRJEB16534	-	Marseille-P2764
Angelakisella massiliensis	1871018	PRJEB16361	349281	Terrabacteria group	Firmicutes	4.04178	53.1	-	FNWG01	6	4013	3836	10/27/16	4/13/17	Scaffold	URMITE	SAMEA4519310	GCA_900104675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/675/GCA_900104675.1_PRJEB16361	-	Marseille-P3217
Candidatus Tremblaya princeps	189385	PRJEB12069	316506	Proteobacteria	Betaproteobacteria	0.140306	58.3	chromosome I:LN998829.1	-	1	170	124	3/26/16	3/26/16	Complete Genome	UNIVERSITY OF SOUTH BOHEMIA	SAMEA3723486	GCA_900014395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/395/GCA_900014395.1_TPPMAR	-	-
Libanicoccus massiliensis	1871022	PRJEB18025	354766	Terrabacteria group	Actinobacteria	2.00931	65.4	chromosome scaffold00001:NZ_LT671675.1/LT671675.1	-	1	1811	1721	12/9/16	4/16/17	Chromosome	URMITE	SAMEA4555315	GCA_900143685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/685/GCA_900143685.1_PRJEB18025	-	Marseille-P3237
Merdibacter massiliensis	1871030	PRJEB18752	359779	Terrabacteria group	Firmicutes	2.4687	40.1	-	FTLC01	23	2422	2315	1/4/17	4/17/17	Scaffold	URMITE	SAMEA37054168	GCA_900155395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/395/GCA_900155395.1_PRJEB18752	-	Marseille-P3254
Massilioclostridium coli	1870991	PRJEB15310	341970	Terrabacteria group	Firmicutes	2.98533	40	-	FMIZ01	7	2592	2459	9/7/16	4/13/17	Contig	URMITE	SAMEA4415571	GCA_900095865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/865/GCA_900095865.1_PRJEB15310	-	Marseille-P2976
Pseudomonas saudimassiliensis	1461581	PRJEB5504	244986	Proteobacteria	Gammaproteobacteria	3.34421	62.5	-	-	3	3121	3014	-	-	Scaffold	URMITE	SAMEA2539499	GCA_000939975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/975/GCA_000939975.1_PRJEB5504_assembly_1	-	12M76_air
Arthrobacter saudimassiliensis	1461584	PRJEB5507	244987	Terrabacteria group	Actinobacteria	3.55211	70.3	-	-	3	3299	3210	-	-	Scaffold	URMITE	SAMEA2658260	GCA_900016675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/675/GCA_900016675.1_PRJEB5507_assembly_1	-	11W110_air
Aeromonas veronii	654	PRJNA293940	293940	Proteobacteria	Gammaproteobacteria	4.92301	58.3	chromosome:NZ_CP012504.1/CP012504.1	-	1	4602	4316	3/16/16	4/10/17	Complete Genome	"Animal Science and Technology College,Jilin Agricultural University"	SAMN04012505	GCA_001593245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/245/GCA_001593245.1_ASM159324v1	-	TH0426
Pyrobaculum sp. WP30	1227555	PRJNA258558	258558	TACK group	Crenarchaeota	1.99326	58.3	chromosome:CP012158.1	-	1	2251	2216	7/30/15	7/30/15	Complete Genome	Montana State University	SAMN02999931	GCA_001189275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/275/GCA_001189275.1_ASM118927v1	-	WP30
Parascardovia denticolens DSM 10105 = JCM 12538	864564	PRJDB64	279564	Terrabacteria group	Actinobacteria	1.89086	58.3	chromosome Unknown:NZ_AP012333.1/AP012333.1	-	1	1594	1508	3/24/15	4/10/17	Complete Genome	"Graduate School of Frontier Sciences, University of Tokyo"	SAMD00061048	GCA_001042675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/675/GCA_001042675.1_ASM104267v1	25977413	JCM 12538
Streptococcus cuniculi	1432788	PRJNA358417	358417	Terrabacteria group	Firmicutes	2.09485	43.4	-	MSJM01	18	2063	1977	12/24/16	7/24/17	Contig	Centers for Disease Control and Prevention	SAMN06174763	GCA_001921845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/921/845/GCA_001921845.1_ASM192184v1	-	CCUG 65085
Leucobacter musarum subsp. musarum	1461261	PRJNA240071	240071	Terrabacteria group	Actinobacteria	3.43879	66.8	-	JHBW01	125	3131	3048	8/25/15	4/11/17	Contig	University of Oxford	SAMN02673065	GCA_001273845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/845/GCA_001273845.1_CBX152_1.1	26275616	CBX152
Thermoplasmatales archaeon BRNA1	1054217	PRJNA68695	68695	Euryarchaeota	Thermoplasmata	1.46111	58.3	chromosome:NC_020892.1/CP002916.1	-	1	1526	1465	4/2/13	4/17/17	Complete Genome	CSIRO Livestock Industries	SAMN02603168	GCA_000350305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/305/GCA_000350305.1_ASM35030v1	-	BRNA1
Arcobacter porcinus	1935204	PRJNA282911	282911	Proteobacteria	delta/epsilon subdivisions	1.78166	27.1	-	LCSK01	11	1868	1813	7/26/16	4/13/17	Contig	Ghent University	SAMN03580792	GCA_001695195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/195/GCA_001695195.1_ASM169519v1	-	213
Micromonospora avicenniae	1198245	PRJEB18849	360738	Terrabacteria group	Actinobacteria	6.8233	71.5	-	FTNF01	63	6052	5815	1/14/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444858	GCA_900156065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/065/GCA_900156065.1_IMG-taxon_2681813563_annotated_assembly	-	DSM 45758
Salimicrobium salexigens	908941	PRJEB18830	360750	Terrabacteria group	Firmicutes	2.5841	46.8	-	FTOK01	34	2634	2527	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421758	GCA_900156705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/705/GCA_900156705.1_IMG-taxon_2681813520_annotated_assembly	-	DSM 22782
Chryseobacterium chaponense	713588	PRJEB18831	360751	FCB group	Bacteroidetes/Chlorobi group	3.04315	35.3	-	FTOI01	34	2814	2739	1/14/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421789	GCA_900156725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/725/GCA_900156725.1_IMG-taxon_2681813521_annotated_assembly	-	DSM 23145
Chryseobacterium gambrini	373672	PRJEB18841	360740	FCB group	Bacteroidetes/Chlorobi group	4.84169	36.1	-	FTOV01	51	4453	4306	1/14/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421785	GCA_900156825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/825/GCA_900156825.1_IMG-taxon_2681813561_annotated_assembly	-	DSM 18014
Kroppenstedtia eburnea	714067	PRJEB18823	360794	Terrabacteria group	Firmicutes	3.53205	54.1	-	FTOD01	27	3533	3360	1/14/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421790	GCA_900156615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/615/GCA_900156615.1_IMG-taxon_2681813512_annotated_assembly	-	DSM 45196
Gemmobacter megaterium	1086013	PRJEB18837	360747	Proteobacteria	Alphaproteobacteria	4.16809	64.9	-	FTOT01	45	4041	3931	1/14/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421774	GCA_900156815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/815/GCA_900156815.1_IMG-taxon_2681813556_annotated_assembly	-	DSM 26375
Insolitispirillum peregrinum	80876	PRJEB18819	360800	Proteobacteria	Alphaproteobacteria	4.63804	61.9	-	FTOA01	25	4000	3893	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421779	GCA_900156605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/605/GCA_900156605.1_IMG-taxon_2681813507_annotated_assembly	-	DSM 11589
Paracoccus saliphilus	405559	PRJEB18842	360741	Proteobacteria	Alphaproteobacteria	4.57066	61.1	-	FTOU01	55	4382	4238	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421772	GCA_900156835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/835/GCA_900156835.1_IMG-taxon_2681813562_annotated_assembly	-	DSM 18447
Chryseobacterium piscicola	551459	PRJEB18825	360796	FCB group	Bacteroidetes/Chlorobi group	3.4524	33.8	-	FTOJ01	28	3127	3017	1/14/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421796	GCA_900156685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/685/GCA_900156685.1_IMG-taxon_2681813514_annotated_assembly	-	DSM 21068
Halanaerobium kushneri	56779	PRJEB18890	360757	Terrabacteria group	Firmicutes	3.22215	34.2	-	FTNC01	54	3001	2881	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421834	GCA_900156285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/285/GCA_900156285.1_IMG-taxon_2681812893_annotated_assembly	-	ATCC 700103
Williamsia sterculiae	1344003	PRJEB18904	360697	Terrabacteria group	Actinobacteria	4.44101	67.2	-	FTNT01	20	4124	3979	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05445060	GCA_900156495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/495/GCA_900156495.1_IMG-taxon_2681812929_annotated_assembly	-	CPCC 203464
Rhodobacter aestuarii	453582	PRJEB18827	360788	Proteobacteria	Alphaproteobacteria	3.84115	61.1	-	FTOG01	31	3647	3547	1/14/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421580	GCA_900156655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/655/GCA_900156655.1_IMG-taxon_2681813516_annotated_assembly	-	DSM 19945
Acidiphilium rubrum	526	PRJEB18877	360784	Proteobacteria	Alphaproteobacteria	3.97699	63.8	-	FTNE01	78	3719	3551	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421828	GCA_900156265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/265/GCA_900156265.1_IMG-taxon_2681812815_annotated_assembly	-	ATCC 35905
Chryseobacterium ureilyticum	373668	PRJEB18833	360753	FCB group	Bacteroidetes/Chlorobi group	5.18323	34.7	-	FTOL01	27	4719	4582	1/14/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421786	GCA_900156735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/735/GCA_900156735.1_IMG-taxon_2681813509_annotated_assembly	-	DSM 18017
Azoarcus tolulyticus	34027	PRJEB18872	360779	Proteobacteria	Betaproteobacteria	5.11039	66.4	-	FTMD01	36	4681	4539	1/14/17	6/20/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421829	GCA_900156155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/155/GCA_900156155.1_IMG-taxon_2681812808_annotated_assembly	-	ATCC 51758
Cellulosimicrobium aquatile	1612203	PRJEB18885	360772	Terrabacteria group	Actinobacteria	4.31771	74.7	-	FTMI01	14	3820	3707	1/14/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05518682	GCA_900155925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/925/GCA_900155925.1_IMG-taxon_2681812868_annotated_assembly	-	3bp
Vibrio ostreicida	526588	PRJNA353009	353009	Proteobacteria	Gammaproteobacteria	4.49607	45.7	-	MPHM01	60	4117	3916	1/19/17	4/17/17	Contig	UC Davis	SAMN06007766	GCA_001957165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/957/165/GCA_001957165.1_ASM195716v1	-	UCD-KL16
Frankia discariae	365528	PRJNA169728	169728	Terrabacteria group	Actinobacteria	7.89171	72.4	-	ARDT01	194	6712	6208	4/19/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441714	GCA_000373365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/365/GCA_000373365.1_ASM37336v1	23846281	BCU110501
Paenibacillus camerounensis	1243663	PRJEB624	179330	Terrabacteria group	Firmicutes	6.93383	51.4	-	CCDG01	154	6061	5816	5/16/14	5/22/17	Contig	URMITE	SAMEA3139052	GCA_000723885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/885/GCA_000723885.1_camerounensis	-	G4
Microbacterium gorillae	1231063	PRJEB7582	264515	Terrabacteria group	Actinobacteria	3.69277	69.3	-	CDAR01	14	3552	3404	11/4/14	8/21/17	Contig	URMITE	SAMEA2826820	GCA_000826185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/185/GCA_000826185.1_Microbacterium_massiliensis_G3	-	G3
Motiliproteus sp. MSK22-1	1897630	PRJNA340196	340196	Proteobacteria	Gammaproteobacteria	6.00388	46.8	-	MIEQ01	102	5250	5114	1/23/17	4/17/17	Contig	The University of Tokyo	SAMN05687752	GCA_001968815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/968/815/GCA_001968815.1_ASM196881v1	-	MSK22-1
Tersicoccus sp. Bi-70	1897634	PRJNA340196	340196	Terrabacteria group	Actinobacteria	3.4795	71.8	-	MIEU01	18	3191	3056	1/23/17	4/17/17	Contig	The University of Tokyo	SAMN05687756	GCA_001968825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/968/825/GCA_001968825.1_ASM196882v1	-	Bi-70
Tersicoccus phoenicis	554083	PRJNA347610	347610	Terrabacteria group	Actinobacteria	3.20956	70.7	-	MRDE01	132	3000	2824	1/23/17	4/17/17	Contig	The University of Tokyo	SAMN05893361	GCA_001968835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/968/835/GCA_001968835.1_ASM196883v1	-	DSM 30849
Paenibacillus mucilaginosus K02	997761	PRJNA63845	63845	Terrabacteria group	Firmicutes	8.8192	58.3	chromosome:NC_017672.3/CP003422.2	-	1	7403	7085	4/12/12	4/8/17	Complete Genome	Nanjing Normal University	SAMN02603635	GCA_000258535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/535/GCA_000258535.2_ASM25853v2	-	K02
Paenibacillus mucilaginosus 3016	1116391	PRJNA77661	77661	Terrabacteria group	Firmicutes	8.73905	58.3	chromosome:NC_016935.1/CP003235.1	-	1	7442	6750	2/27/12	5/19/17	Complete Genome	"Institute of Agricultural Resources and Regional Planning,"	SAMN02603387	GCA_000250655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/655/GCA_000250655.1_ASM25065v1	22535950	3016
Aeromonas salmonicida subsp. masoucida	197700	PRJNA342065	342065	Proteobacteria	Gammaproteobacteria	4.91753	58.2741	chromosome:NZ_CP017143.1/CP017143.1; plasmid unnamed1:NZ_CP017144.1/CP017144.1; plasmid unnamed2:NZ_CP017145.1/CP017145.1	-	3	4724	4114	9/19/17	9/21/17	Complete Genome	Pukyong National University	SAMN05735119	GCA_002313065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/065/GCA_002313065.1_ASM231306v1	-	RFAS1
Aeromonas salmonicida	645	PRJNA391818	391818	Proteobacteria	Gammaproteobacteria	5.06986	58.2429	chromosome:NZ_CP022175.1/CP022175.1; plasmid pS121-1a:NZ_CP022170.1/CP022170.1; plasmid pS121-2:NZ_CP022171.1/CP022171.1; plasmid pS121-3:NZ_CP022172.1/CP022172.1; plasmid pS121-4:NZ_CP022173.1/CP022173.1; plasmid pS121-5:NZ_CP022174.1/CP022174.1	-	6	4853	4307	7/3/17	7/5/17	Complete Genome	Institute of Microbiology Chinese Academy of Sciences	SAMN07276469	GCA_002214245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/245/GCA_002214245.1_ASM221424v1	-	S121
Aeromonas salmonicida	645	PRJNA391845	391845	Proteobacteria	Gammaproteobacteria	5.08291	58.2343	chromosome:NZ_CP022181.1/CP022181.1; plasmid pS44-1:NZ_CP022176.1/CP022176.1; plasmid pS44-2:NZ_CP022177.1/CP022177.1; plasmid pS44-3:NZ_CP022178.1/CP022178.1; plasmid pS44-4:NZ_CP022179.1/CP022179.1; plasmid pS44-5:NZ_CP022180.1/CP022180.1	-	6	4852	4324	7/3/17	7/5/17	Complete Genome	Institute of Microbiology Chinese Academy of Sciences	SAMN07276874	GCA_002214305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/305/GCA_002214305.1_ASM221430v1	-	S44
Chloroflexus islandicus	1707952	PRJNA318439	318439	Terrabacteria group	Chloroflexi	5.13689	60.6	-	LWQS01	125	3993	3861	5/24/16	4/12/17	Scaffold	Research Center of Biotechnology RAS	SAMN04851315	GCA_001650695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/695/GCA_001650695.1_ASM165069v1	-	isl-2
Haloterrigena mahii	1416969	PRJNA227069	227069	Euryarchaeota	Halobacteria	3.79434	65.1	-	JHUT02	24	3764	3591	5/13/14	4/12/17	Scaffold	"National Chung Hsing University, Taichung City, Taiwan R.O.C."	SAMN02390968	GCA_000690595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/595/GCA_000690595.2_ASM69059v2	20662380	H13
Campylobacter ornithocola	1848766	PRJNA321216	321216	Proteobacteria	delta/epsilon subdivisions	1.6685	29.6	-	LXSU01	160	1701	1607	8/15/16	8/21/17	Contig	Institut Pasteur Montevideo	SAMN04978166	GCA_001705345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/345/GCA_001705345.1_ASM170534v1	-	WBE38
Rhizobium arenae	1856850	PRJNA351912	351912	Proteobacteria	Alphaproteobacteria	4.93962	59.8	-	MOOY01	43	4740	4555	1/4/17	4/16/17	Contig	Applied and Environmental Microbiology	SAMN05958284	GCA_001931685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/685/GCA_001931685.1_ASM193168v1	-	MIM27
Candidatus Tremblaya princeps	189385	PRJEB12067	316504	Proteobacteria	Betaproteobacteria	0.14162	58.2	chromosome I:LN999056.1	-	1	173	132	3/26/16	3/26/16	Complete Genome	UNIVERSITY OF SOUTH BOHEMIA	SAMEA3723483	GCA_900012655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/655/GCA_900012655.1_TPFVIR	-	-
Pseudomonas capeferrum	1495066	PRJNA245792	245792	Proteobacteria	Gammaproteobacteria	5.94044	62.7	-	JMIT01	8	5404	5237	7/18/14	4/9/17	Scaffold	"Utrecht University, Utrecht, NETHERLANDS"	SAMN02739926	GCA_000731675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/675/GCA_000731675.1_ASM73167v1	-	WCS358
Acinetobacter idrijaensis	1507807	PRJNA252002	252002	Proteobacteria	Gammaproteobacteria	3.84687	42.9	-	JQCU01	689	3721	3450	10/1/14	4/6/17	Contig	Universidad Autonoma de Queretaro	SAMN02848464	GCA_000761495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/495/GCA_000761495.1_Ai_1.0	25395645	MII
Flaviflexus massiliensis	1522309	PRJEB8801	278324	Terrabacteria group	Actinobacteria	2.63348	59.1	-	CSSZ01	7	2428	2280	3/22/15	4/11/17	Scaffold	URMITE	SAMEA3305043	GCA_001375495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/495/GCA_001375495.1_Flaviflexus_massiliensis	-	SIT4
Pseudomonas versuta	1788301	PRJNA295629	295629	Proteobacteria	Gammaproteobacteria	5.14979	58.2	chromosome:NZ_CP012676.1/CP012676.1	-	1	4709	4468	9/18/15	4/26/17	Complete Genome	University of Malaya	SAMN04076495	GCA_001294575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/575/GCA_001294575.1_ASM129457v1	-	L10.10
Aeromonas salmonicida subsp. salmonicida A449	382245	PRJNA16723	16723	Proteobacteria	Gammaproteobacteria	5.04054	58.1696	chromosome:NC_009348.1/CP000644.1; plasmid 4:NC_009349.1/CP000645.1; plasmid 5:NC_009350.1/CP000646.1; plasmid pAsa1:NC_004923.1/AY301063.1; plasmid pAsa2:NC_004925.1/AY301064.1; plasmid pAsa3:NC_004924.1/AY301065.1	-	6	4792	4366	4/6/07	5/18/17	Complete Genome	National Research Council Canada - Institute of Marine Biosciences	SAMN02603664	GCA_000196395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/395/GCA_000196395.1_ASM19639v1	-	A449
Alkalispirochaeta odontotermitis	1329640	PRJNA258600	258600	Spirochaetes	Spirochaetia	3.82624	49.9	-	JRAS01	275	3314	3160	10/23/14	4/9/17	Contig	UoH	SAMN03000707	GCA_000768055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/055/GCA_000768055.1_ASM76805v1	25614577	JC202
Cohnella kolymensis	1590652	PRJNA271375	271375	Terrabacteria group	Firmicutes	4.34472	50.5	-	JXAL01	34	4432	3897	1/27/15	4/10/17	Contig	Kingston University	SAMN03274191	GCA_000829465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/465/GCA_000829465.1_ASM82946v1	26769947	VKM B-2846
Mannheimia massilioguelmaensis	1604354	PRJEB8319	273839	Proteobacteria	Gammaproteobacteria	2.18681	36.2	-	CDQL01	8	2102	2015	2/4/15	4/10/17	Contig	URMITE	SAMEA3220414	GCA_000940515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/515/GCA_000940515.1_Mannheimia_massilioguelmaensis_MG13T	-	MG13
Clostridium phoceensis	1650661	PRJEB9612	287244	Terrabacteria group	Firmicutes	3.45378	59.3	-	CVUG01	10	3410	3243	6/19/15	4/10/17	Scaffold	URMITE	SAMEA3460838	GCA_001244495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/495/GCA_001244495.1_Clostridium_phoceensis	-	GD3
Haloarcula rubripromontorii	1705562	PRJNA293564	293564	Euryarchaeota	Halobacteria	3.97099	62	-	LIUF01	18	3953	3817	9/9/15	3/29/17	Contig	UPR- Mayaguez	SAMN04007144	GCA_001280425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/425/GCA_001280425.1_ASM128042v1	-	SL3
Halorubrum tropicale	1765655	PRJNA293638	293638	Euryarchaeota	Halobacteria	3.56702	67.6	-	LIST01	17	3559	3373	9/9/15	4/11/17	Contig	UPR- Mayaguez	SAMN04009067	GCA_001280455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/455/GCA_001280455.1_ASM128045v1	-	5
Streptococcus varani	1608583	PRJEB8936	279372	Terrabacteria group	Firmicutes	2.46038	40.4	-	CTEN01	16	2477	2310	4/21/15	7/29/17	Contig	URMITE	SAMEA3312815	GCA_001375655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/655/GCA_001375655.1_PRJEB8936_assembly_1	-	FF10
Candidatus Berkiella aquae	295108	PRJNA289553	289553	Proteobacteria	Gammaproteobacteria	3.62532	39.5	-	LKAJ01	56	3246	3142	11/4/15	4/16/17	Contig	Middle Tennessee State University	SAMN03855788	GCA_001431295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/295/GCA_001431295.1_ASM143129v1	26893424	HT99
Candidatus Berkiella cookevillensis	437022	PRJNA289553	289553	Proteobacteria	Gammaproteobacteria	2.99029	37.9	-	LKHV01	44	2598	2503	11/4/15	4/16/17	Contig	Middle Tennessee State University	SAMN03855808	GCA_001431315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/315/GCA_001431315.1_ASM143131v1	26893424	CC99
Blautia massiliensis	1737424	PRJEB11857	304134	Terrabacteria group	Firmicutes	3.71734	44	-	FAVI01	5	3396	3251	11/29/15	5/18/16	Scaffold	URMITE	SAMEA3676640	GCA_001487165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/165/GCA_001487165.1_Blautia_massiliensis1	-	GD9
Aeromonas sp. O23A	697046	PRJNA383853	383853	Proteobacteria	Gammaproteobacteria	4.93534	58.1473	chromosome:NZ_CP021654.1/CP021654.1; plasmid pO23AP1:NZ_CP021655.1/CP021655.1; plasmid pO23AP2:NZ_CP021656.1/CP021656.1; plasmid pO23AP3:NZ_CP021657.1/CP021657.1; plasmid pO23AP4:NZ_CP021658.1/CP021658.1	-	5	4584	4359	6/8/17	6/10/17	Complete Genome	University of Warsaw	SAMN06812489	GCA_002180335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/335/GCA_002180335.1_ASM218033v1	-	O23A
Xanthomonas massiliensis	1720302	PRJEB12553	310081	Proteobacteria	Gammaproteobacteria	3.6897	70.5	-	FCOY01	7	3184	3042	2/2/16	3/2/17	Contig	URMITE	SAMEA3858978	GCA_900018785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/785/GCA_900018785.1_Xanthomonas_massiliensis	-	SN8
Corynebacterium bouchesdurhonense	1720192	PRJEB13138	316095	Terrabacteria group	Actinobacteria	2.25554	68	-	FJVG01	21	2191	2058	3/24/16	3/2/17	Contig	URMITE	SAMEA3905754	GCA_900078305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/305/GCA_900078305.1_PRJEB13138	-	SN14
Streptomyces jeddahensis	1716141	PRJNA305383	305383	Terrabacteria group	Actinobacteria	8.44962	70.3	-	LOHS01	207	7435	6960	5/12/16	3/2/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04325095	GCA_001642995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/995/GCA_001642995.1_ASM164299v1	-	G25(2015)
Gracilibacillus timonensis	1816696	PRJEB13933	321143	Terrabacteria group	Firmicutes	4.54748	39.8	-	FLKH01	12	4328	4177	5/13/16	3/2/17	Contig	URMITE	SAMEA3959753	GCA_900086715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/715/GCA_900086715.1_PRJEB13933	-	Marseille-P2481
Mangrovibacter phragmitis	1691903	PRJNA323358	323358	Proteobacteria	Gammaproteobacteria	4.94747	49.9	-	LYRP01	50	4649	4428	6/3/16	4/12/17	Contig	Wetland Research and Training Centre	SAMN05177220	GCA_001655675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/675/GCA_001655675.1_ASM165567v1	-	MP23
Corynebacterium provencense	1737425	PRJEB12691	311690	Terrabacteria group	Actinobacteria	3.08418	66.8	-	FIZC01	22	2808	2593	2/12/16	3/2/17	Scaffold	URMITE	SAMEA3869306	GCA_900049755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/755/GCA_900049755.1_PRJEB12691	-	SN15
Corynebacterium phoceense	1686286	PRJEB14666	327638	Terrabacteria group	Actinobacteria	2.79322	63.1	-	FLTI01	14	2681	2398	7/3/16	4/17/17	Scaffold	URMITE	SAMEA4059842	GCA_900092335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/335/GCA_900092335.1_PRJEB14666	-	MC1
Ensifer shofinae	1850094	PRJNA329040	329040	Proteobacteria	Alphaproteobacteria	6.21479	61.6	-	MBFK01	207	5971	5420	8/14/16	3/2/17	Contig	College of Biological Sciences	SAMN05411298	GCA_001704765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/765/GCA_001704765.1_ASM170476v1	-	CCBAU 251167
Bacteroides ihuae	1852362	PRJEB16348	349293	FCB group	Bacteroidetes/Chlorobi group	4.0637	39.7	-	FNVX01	6	3304	3202	10/27/16	3/2/17	Contig	URMITE	SAMEA4518713	GCA_900104585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/585/GCA_900104585.1_PRJEB16348	-	Marseille-P2824
Actinomyces urinae	1689268	PRJEB17950	353836	Terrabacteria group	Actinobacteria	1.9469	56.1	-	FPKP01	3	1743	1666	11/17/16	4/14/17	Scaffold	URMITE	SAMEA4548672	GCA_900119695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/695/GCA_900119695.1_PRJEB17950	-	Marseille-P2225
Actinomyces provencensis	1720198	PRJEB18758	360089	Terrabacteria group	Actinobacteria	3.349	69.6	-	FTLI01	23	2890	2651	1/5/17	3/2/17	Scaffold	URMITE	SAMEA37237168	GCA_900155435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/435/GCA_900155435.1_PRJEB18758	-	SN12
Desulfurobacterium indicum	1914305	PRJNA351764	351764	Aquificae	Aquificae	1.60741	38.2	-	MOEN01	62	1732	1625	1/23/17	3/2/17	Contig	The Third Institute of State Oceanic Administration	SAMN05954263	GCA_001968985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/968/985/GCA_001968985.1_ASM196898v1	-	K6013
Paraburkholderia ribeironis	1247936	PRJEB10534	328329	Proteobacteria	Betaproteobacteria	7.27915	62.5	-	CYGX02	228	6588	6082	7/8/16	8/22/17	Scaffold	IRD	SAMEA3512853	GCA_900019265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/265/GCA_900019265.2_BN2475-7296	-	STM7296
Marinobacter lutaoensis	135739	PRJNA357186	357186	Proteobacteria	Gammaproteobacteria	3.82731	63.2	-	MSCW01	25	3496	3392	2/1/17	4/17/17	Contig	CSIR-Institute of Microbial Technology	SAMN06134660	GCA_001981305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/305/GCA_001981305.1_ASM198130v1	-	T5054
Alkanindiges sp. H1	1907941	PRJNA347879	347879	Proteobacteria	Gammaproteobacteria	3.2976	46.4	-	MLCN01	92	3108	2970	2/1/17	4/17/17	Contig	Kyonggi University	SAMN05898119	GCA_001982605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/605/GCA_001982605.1_ASM198260v1	-	H1
Pseudomonas savastanoi pv. savastanoi NCPPB 3335	693985	PRJNA41887	41887	Proteobacteria	Gammaproteobacteria	6.01683	58.1	chromosome:NZ_CP008742.1/CP008742.1	-	1	5764	5139	3/31/17	4/11/17	Complete Genome	University of Wisconsin-Madison	SAMN02471367	GCA_000164015.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/015/GCA_000164015.3_ASM16401v3	20370821	NCPPB 3335
Pseudomonas amygdali pv. lachrymans	53707	PRJNA379352	379352	Proteobacteria	Gammaproteobacteria	6.00924	58.1	chromosome:NZ_CP020351.1/CP020351.1	-	1	5706	5375	3/22/17	3/24/17	Complete Genome	"Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences"	SAMN06606132	GCA_002068135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/068/135/GCA_002068135.1_ASM206813v1	-	NM002
Hyphomonas sp. Mor2	1906738	PRJNA345363	345363	Proteobacteria	Alphaproteobacteria	3.62809	58.1	chromosome:NZ_CP017718.1/CP017718.1	-	1	3496	3439	10/26/16	4/13/17	Complete Genome	UCSD	SAMN05826286	GCA_001854405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/405/GCA_001854405.1_ASM185440v1	-	-
Actinosynnema sp. ALI-1.44	1933779	PRJNA360630	360630	Terrabacteria group	Actinobacteria	11.7123	68.2	-	MTQO01	54	10512	10099	2/3/17	4/17/17	Contig	Los Alamos National Laboratory	SAMN06213936	GCA_001984155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/155/GCA_001984155.1_ASM198415v1	28087533	ALI-1.44
Kribbella sp. ALI-6-A	1933817	PRJNA360627	360627	Terrabacteria group	Actinobacteria	8.10191	69.8	-	MTQN01	12	7637	7424	2/3/17	4/17/17	Contig	Los Alamos National Laboratory	SAMN06213931	GCA_001984195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/195/GCA_001984195.1_ASM198419v1	28087533	ALI-6-A
Streptococcus azizii	1579424	PRJNA358417	358417	Terrabacteria group	Firmicutes	2.37404	42.7	-	MSPT01	43	2134	1970	2/4/17	4/17/17	Contig	Centers for Disease Control and Prevention	SAMN06174762	GCA_001984705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/705/GCA_001984705.1_ASM198470v1	-	Dec-91
Corynebacterium epidermidicanis	1050174	PRJNA280479	280479	Terrabacteria group	Actinobacteria	2.69207	58.1	chromosome:NZ_CP011541.1/CP011541.1	-	1	2484	2350	6/5/15	4/17/17	Complete Genome	Bielefeld University	SAMN03462986	GCA_001021025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/025/GCA_001021025.1_ASM102102v1	26294641	DSM 45586
Pseudomonas cichorii JBC1	1441629	PRJNA232591	232591	Proteobacteria	Gammaproteobacteria	5.98601	58.1	chromosome:NZ_CP007039.1/CP007039.1	-	1	5193	5006	1/9/14	4/9/17	Complete Genome	"National Academy of Agricultural Science, RDA"	SAMN02641561	GCA_000517305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/305/GCA_000517305.1_ASM51730v1	-	JBC1
Pontibacter indicus	1317125	PRJEB18888	360775	FCB group	Bacteroidetes/Chlorobi group	4.56624	51.9	-	FTPP01	8	3980	3892	1/19/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444128	GCA_900156345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/345/GCA_900156345.1_IMG-taxon_2681812890_annotated_assembly	-	LP100
Edaphobacillus lindanitolerans	550447	PRJEB18883	360770	Terrabacteria group	Firmicutes	3.05204	56.1	-	FTPL01	8	2996	2913	1/19/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05428946	GCA_900156305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/305/GCA_900156305.1_IMG-taxon_2681812865_annotated_assembly	-	MNA4
Pontibaca methylaminivorans	515897	PRJEB18907	360700	Proteobacteria	Alphaproteobacteria	2.65098	66.5	-	FTPS01	8	2565	2468	1/19/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421849	GCA_900156525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/525/GCA_900156525.1_IMG-taxon_2681812934_annotated_assembly	-	DSM 21219
Ectothiorhodosinus mongolicus	233100	PRJEB18882	360769	Proteobacteria	Gammaproteobacteria	1.99096	55.6	-	FTPK01	6	1894	1821	1/19/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216526	GCA_900156225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/225/GCA_900156225.1_IMG-taxon_2681812864_annotated_assembly	-	M9
Loktanella rosea	287098	PRJEB18905	360698	Proteobacteria	Alphaproteobacteria	3.51428	57.7	-	FTPR01	5	3514	3451	1/19/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421665	GCA_900156505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/505/GCA_900156505.1_IMG-taxon_2681812930_annotated_assembly	-	DSM 29591
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	525146	PRJNA29493	29493	Proteobacteria	delta/epsilon subdivisions	2.87344	58.1	chromosome:NC_011883.1/CP001358.1	-	1	2509	2406	1/9/09	4/6/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00001882	GCA_000022125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/125/GCA_000022125.1_ASM2212v1	-	ATCC 27774
Rhizobium marinum	1496690	PRJNA246118	246118	Proteobacteria	Alphaproteobacteria	5.06198	63	-	JMQK01	87	4920	4742	6/12/14	4/9/17	Contig	85303	SAMN02743500	GCA_000705355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/355/GCA_000705355.1_SOAPdenovo_for_version_1.05_of_Rhizobium_marinus_MGL06	-	MGL06
Hymenobacter terrenus	1629124	PRJNA280376	280376	FCB group	Bacteroidetes/Chlorobi group	6.35698	57.8	-	LATM01	174	5391	5202	4/15/15	4/10/17	Contig	"Inner Mongolia agricultural university, college of life science"	SAMN03460197	GCA_000972495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/495/GCA_000972495.1_ASM97249v1	-	MIMtkLc17
Gracilibacillus massiliensis	1564956	PRJEB11655	301227	Terrabacteria group	Firmicutes	4.20723	36.1	-	CZRP01	13	3876	3757	11/6/15	4/11/17	Contig	URMITE	SAMEA3645294	GCA_001458115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/115/GCA_001458115.1_Gracilibacillus_massiliensis	-	Awa-1
Klebsiella quasipneumoniae	1463165	PRJNA309571	309571	Proteobacteria	Gammaproteobacteria	5.08979	58	chromosome:NZ_CP014154.1/CP014154.1	-	1	5028	4792	8/3/17	8/7/17	Complete Genome	The University of Hong Kong	SAMN04436401	GCA_002240295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/295/GCA_002240295.1_ASM224029v1	-	HKUOPA4
Klebsiella quasipneumoniae	1463165	PRJNA309572	309572	Proteobacteria	Gammaproteobacteria	5.08863	58	chromosome:CP014155.1	-	1	4966	4770	8/3/17	8/3/17	Complete Genome	The University of Hong Kong	SAMN04436402	GCA_002240315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/315/GCA_002240315.1_ASM224031v1	-	HKUOPJ4
Klebsiella quasipneumoniae	1463165	PRJNA309573	309573	Proteobacteria	Gammaproteobacteria	5.08795	58	chromosome:CP014156.1	-	1	4966	4769	8/3/17	8/3/17	Complete Genome	The University of Hong Kong	SAMN04436403	GCA_002240335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/335/GCA_002240335.1_ASM224033v1	-	HKUOPL4
Acidihalobacter ferrooxidans	1765967	PRJNA362495	362495	Proteobacteria	Gammaproteobacteria	3.44883	61.6	chromosome:NZ_CP019434.1/CP019434.1	-	1	3193	3051	1/30/17	4/17/17	Chromosome	Curtin University	SAMN06240324	GCA_001975725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/725/GCA_001975725.1_ASM197572v1	-	V8
Ensifer aridi	1708715	PRJNA210334	210334	Proteobacteria	Alphaproteobacteria	6.80226	61.6	-	AZNX01	57	6527	6028	12/17/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02597177	GCA_000510685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/510/685/GCA_000510685.1_ASM51068v1	-	TW10
Haloterrigena saccharevitans	301967	PRJNA318845	318845	Euryarchaeota	Halobacteria	3.98062	65.3	-	LWLN01	3	3989	3745	1/18/17	4/17/17	Contig	National Chung Hsing University	SAMN04868784	GCA_001953745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/745/GCA_001953745.1_ASM195374v1	-	AB14
Chromobacterium aquaticum	467180	PRJNA353943	353943	Proteobacteria	Betaproteobacteria	4.77001	64.8	-	MQZY01	163	4448	4296	1/18/17	4/17/17	Contig	Midwestern University	SAMN06033694	GCA_001953775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/775/GCA_001953775.1_ASM195377v1	-	CC-SEYA-1
Chromobacterium pseudoviolaceum	686830	PRJNA353943	353943	Proteobacteria	Betaproteobacteria	4.62922	64.7	-	MQZX01	326	4296	4137	1/18/17	4/17/17	Contig	Midwestern University	SAMN06030702	GCA_001953795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/795/GCA_001953795.1_ASM195379v1	-	LMG 3953
Amycolatopsis coloradensis	76021	PRJNA307637	307637	Terrabacteria group	Actinobacteria	9.04949	68.4	-	MQUQ01	57	8341	7937	1/18/17	4/17/17	Scaffold	Institute of Microbial Technology	SAMN04384194	GCA_001953865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/865/GCA_001953865.1_ASM195386v1	-	DSM 44225
Streptomyces amritsarensis	681158	PRJNA308045	308045	Terrabacteria group	Actinobacteria	7.81679	72.6	-	MQUR01	208	7124	6788	1/18/17	3/15/17	Scaffold	Institute of Microbial Technology	SAMN04386232	GCA_001953875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/875/GCA_001953875.1_ASM195387v1	-	MTCC 11845
Viridibacillus sp. FSL H8-0123	1928922	PRJNA343020	343020	Terrabacteria group	Firmicutes	4.44633	35.3	-	MSPU01	37	4361	4240	1/18/17	4/17/17	Contig	Cornell University	SAMN05929613	GCA_001955615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/615/GCA_001955615.1_ASM195561v1	-	FSL H8-0123
Mucilaginibacter lappiensis	354630	PRJEB18873	360780	FCB group	Bacteroidetes/Chlorobi group	6.79085	41.7	-	FTMG01	39	5741	5623	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421821	GCA_900155965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/965/GCA_900155965.1_IMG-taxon_2681812809_annotated_assembly	-	ATCC BAA-1855
Roseivivax lentus	633194	PRJEB18839	360749	Proteobacteria	Alphaproteobacteria	4.43933	66.1	-	FTOQ01	46	4152	4040	1/14/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421759	GCA_900156805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/805/GCA_900156805.1_IMG-taxon_2681813559_annotated_assembly	-	DSM 29430
Shewanella morhuae	365591	PRJEB18895	360762	Proteobacteria	Gammaproteobacteria	4.19037	44	-	FTNN01	32	3677	3476	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421840	GCA_900156405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/405/GCA_900156405.1_IMG-taxon_2681812898_annotated_assembly	-	ATCC BAA-1205
Sphingorhabdus flavimaris	266812	PRJNA380207	380207	Proteobacteria	Alphaproteobacteria	3.47972	58	chromosome:NZ_CP022336.1/CP022336.1	-	1	3359	3270	7/13/17	7/15/17	Complete Genome	University of Gothenburg	SAMN07189730	GCA_002218195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/195/GCA_002218195.1_ASM221819v1	-	SMR4y
Pseudacidovorax sp. RU35E	1907403	PRJEB18867	360724	Proteobacteria	Betaproteobacteria	5.68544	69	-	FTMY01	28	5204	5081	1/14/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05880557	GCA_900156165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/165/GCA_900156165.1_IMG-taxon_2708742465_annotated_assembly	-	RU35E
Luteimonas tolerans	1604334	PRJEB18884	360771	Proteobacteria	Gammaproteobacteria	2.54112	61.6	-	FTLW01	20	2439	2355	1/14/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421546	GCA_900155935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/935/GCA_900155935.1_IMG-taxon_2681812867_annotated_assembly	-	UM1
Oleibacter marinus	484498	PRJEB18826	360787	Proteobacteria	Gammaproteobacteria	3.85947	51.4	-	FTOH01	30	3523	3422	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421686	GCA_900156675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/675/GCA_900156675.1_IMG-taxon_2681813515_annotated_assembly	-	DSM 24913
Salimicrobium flavidum	570947	PRJEB18822	360793	Terrabacteria group	Firmicutes	2.90083	45.5	-	FTOC01	27	2926	2799	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421687	GCA_900156645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/645/GCA_900156645.1_IMG-taxon_2681813511_annotated_assembly	-	DSM 23127
Filimonas lacunae	477680	PRJEB18835	360755	FCB group	Bacteroidetes/Chlorobi group	7.76367	44	-	FTOR01	42	6215	6053	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421788	GCA_900156765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/765/GCA_900156765.1_IMG-taxon_2681813554_annotated_assembly	-	DSM 21054
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA291804	291804	Proteobacteria	Gammaproteobacteria	5.08887	58	chromosome:NZ_CP012300.1/CP012300.1	-	1	4998	4767	9/10/15	2/21/17	Complete Genome	University of Hong Kong	SAMN03955386	GCA_001280925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/925/GCA_001280925.1_ASM128092v1	-	HKUOPLC
Paenibacillus lautus	1401	PRJNA343020	343020	Terrabacteria group	Firmicutes	7.65589	48.5	-	MRTF01	80	6881	6603	1/18/17	4/16/17	Contig	Cornell University	SAMN05929606	GCA_001955975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/975/GCA_001955975.1_ASM195597v1	-	FSL F4-0100
Bacillus zhangzhouensis	1178540	PRJNA162769	162769	Terrabacteria group	Firmicutes	3.73619	41.4	-	JOTP01	106	3865	3709	6/27/14	3/2/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02870955	GCA_000715205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/205/GCA_000715205.1_SOAPdenovo_v1.05	26705002	DW5-4
Haemophilus massiliensis	1461579	PRJEB5521	244989	Proteobacteria	Gammaproteobacteria	2.55613	46	-	CCFL01	46	2440	2272	9/5/14	3/3/17	Contig	URMITE	SAMEA2602905	GCA_000752475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/475/GCA_000752475.1_Haemophilus_massiliensis	-	-
Bacillus australimaris	1326968	PRJNA290467	290467	Terrabacteria group	Firmicutes	3.649	41.3	-	LGYN01	31	3718	3624	10/6/15	3/2/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN03892176	GCA_001307105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/105/GCA_001307105.1_ASM130710v1	26705002	NH7I_1
Legionella saoudiensis	1750561	PRJEB11688	301491	Proteobacteria	Gammaproteobacteria	3.84629	39.4	-	CZVG01	10	3355	3213	11/10/15	3/2/17	Scaffold	URMITE	SAMEA3647790	GCA_001465875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/465/875/GCA_001465875.1_Legionella_saoudiensis	-	LH-SWC
Pseudoruegeria marinistellae	1739787	PRJNA299081	299081	Proteobacteria	Alphaproteobacteria	5.422	63	-	LNCI01	41	5038	4946	1/8/16	3/2/17	Contig	Anhui University	SAMN04193328	GCA_001509585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/585/GCA_001509585.1_ASM150958v1	-	SF-16
Klebsiella variicola	244366	PRJNA291549	291549	Proteobacteria	Gammaproteobacteria	5.09005	58	chromosome:NZ_CP012252.1/CP012252.1	-	1	5005	4771	9/4/15	2/21/17	Complete Genome	University of Hong Kong 	SAMN03945398	GCA_001278905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/905/GCA_001278905.1_ASM127890v1	26472841	HKUOPLA
Vitellibacter aquimaris	1548749	PRJNA261777	261777	FCB group	Bacteroidetes/Chlorobi group	3.14727	39.9	-	JRWG01	66	2920	2831	2/25/16	3/2/17	Contig	"FACULTY OF BIOSCIENCES AND MEDICAL ENGINEERING, UNIVERSITI TEKNOLOGI MALAYSIA"	SAMN03075687	GCA_001573155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/155/GCA_001573155.1_ASM157315v1	27334651	D-24
Mycobacterium icosiumassiliensis	1792835	PRJEB13234	317078	Terrabacteria group	Actinobacteria	4.84463	66.8	-	FJVP01	79	4686	4283	4/1/16	3/2/17	Contig	URMITE	SAMEA3913389	GCA_900078685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/685/GCA_900078685.1_PRJEB13234	-	8WA6
Granulicella mallensis MP5ACTX8	682795	PRJNA47903	47903	Acidobacteria	Acidobacteriia	6.23758	57.9	chromosome:NC_016631.1/CP003130.1	-	1	4879	4779	12/1/11	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02232025	GCA_000178955.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/955/GCA_000178955.2_ASM17895v2	-	MP5ACTX8
Pseudomonas savastanoi pv. phaseolicola 1448A	264730	PRJNA12416	12416	Proteobacteria	Gammaproteobacteria	6.11245	57.8989	chromosome:NC_005773.3/CP000058.1; plasmid large plasmid:NC_007274.1/CP000059.1; plasmid small plasmid:NC_007275.1/CP000060.1	-	3	5850	5165	3/4/04	8/28/17	Complete Genome	Cornell University	SAMN02603162	GCA_000012205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/205/GCA_000012205.1_ASM1220v1	16159782	1448A; BAA-978
Piscirickettsia litoralis	1891921	PRJNA339627	339627	Proteobacteria	Gammaproteobacteria	3.89743	40.8	-	MDTU01	16	3871	3241	9/2/16	3/2/17	Scaffold	University of Hawaii at Manoa	SAMN05601431	GCA_001720395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/395/GCA_001720395.1_ASM172039v1	27811116	Y2
Bacillus dakarensis	1926278	PRJEB18959	361347	Terrabacteria group	Firmicutes	5.48167	38.9	-	FTOZ01	11	5199	4872	1/15/17	4/17/17	Scaffold	URMITE	SAMEA48511168	GCA_900156875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/875/GCA_900156875.1_PRJEB18969	-	Marseille-P3515
Peptoniphilus urinimassiliensis	1871017	PRJEB18033	354758	Terrabacteria group	Firmicutes	1.82283	49.7	-	FTPC01	4	1770	1664	1/17/17	4/17/17	Scaffold	URMITE	SAMEA17756668	GCA_900155585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/585/GCA_900155585.1_PRJEB18033	-	Marseille-P3195
Cronobacter universalis NCTC 9529	1074000	PRJNA291037	291037	Proteobacteria	Gammaproteobacteria	4.43687	57.8737	chromosome:NZ_CP012257.1/CP012257.1; plasmid pCUNV1:NZ_CP012258.1/CP012258.1	-	2	4278	4078	9/1/15	4/11/17	Complete Genome	Nestle Institute of Health Sciences	SAMN03938715	GCA_001277175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/175/GCA_001277175.1_ASM127717v1	27013041	NCTC 9529
Woeseia oceani	1548547	PRJNA326567	326567	Proteobacteria	Gammaproteobacteria	4.05989	57.8	chromosome:NZ_CP016268.1/CP016268.1	-	1	3655	3572	6/30/16	4/13/17	Complete Genome	Shandong University	SAMN05285282	GCA_001677435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/435/GCA_001677435.1_ASM167743v1	-	XK5
Oceanospirillum linum	966	PRJNA356442	356442	Proteobacteria	Gammaproteobacteria	3.78219	49.1	-	MTSD02	289	3316	3170	2/10/17	3/15/17	Contig	University of New Hampshire - Manchester	SAMN06114004	GCA_001995095.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/095/GCA_001995095.2_ASM199509v2	-	ATCC 11336
Thioalkalivibrio halophilus	252474	PRJNA373847	373847	Proteobacteria	Gammaproteobacteria	2.87179	67.5	-	MUZR01	97	2798	2624	2/12/17	4/17/17	Scaffold	University of Amsterdam	SAMN06317462	GCA_001995255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/255/GCA_001995255.1_Tv_HL17_v1	-	HL17
Mesorhizobium prunaredense	1631249	PRJEB18586	371586	Proteobacteria	Alphaproteobacteria	7.01387	62.1	-	FTPD01	82	6807	6397	2/6/17	3/2/17	Scaffold	Montpellier SupAgro/ INRA/IRD/CIRAD/UM	SAMEA31222168	GCA_900156895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/895/GCA_900156895.1_BQ8794_STM4891T	-	-
Virgibacillus proomii	84407	PRJEB6464	251843	Terrabacteria group	Firmicutes	4.38219	36	-	FUFN01	10	3908	3688	2/6/17	4/17/17	Contig	URMITE	SAMEA78705418	GCA_900162615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/615/GCA_900162615.1_PRJEB6464	-	V-P
Oceanobacillus sojae	582851	PRJEB6467	251844	Terrabacteria group	Firmicutes	4.79982	38.4	-	FUFQ01	19	4637	4479	2/6/17	4/17/17	Scaffold	URMITE	SAMEA78796168	GCA_900162665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/665/GCA_900162665.1_PRJEB6467	-	SK-2
Halomonas utahensis	86177	PRJEB5957	242471	Proteobacteria	Gammaproteobacteria	3.52519	61.8	-	FUFP01	13	3313	3218	2/6/17	3/29/17	Scaffold	URMITE	SAMEA78793918	GCA_900162675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/675/GCA_900162675.1_PRJEB5957	-	P-halo
Bacillus sinesaloumensis	1926280	PRJEB18960	361345	Terrabacteria group	Firmicutes	4.55645	38	-	FTOX01	3	4415	4219	2/8/17	4/17/17	Scaffold	URMITE	SAMEA49089418	GCA_900156865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/865/GCA_900156865.1_PRJEB18960	-	Marseille-P3516
Massilimaliae massiliensis	1852384	PRJEB18936	361095	Terrabacteria group	Firmicutes	2.84272	47.2	-	FUHT01	4	2766	2684	2/8/17	4/17/17	Contig	URMITE	SAMEA48259918	GCA_900155615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/615/GCA_900155615.1_Massilimalia_massiliensis	-	Marseille-P2963
Mobilibacterium timonense	1871012	PRJEB18028	354769	Terrabacteria group	Firmicutes	2.08604	53	-	FUHN01	8	1874	1797	2/8/17	4/17/17	Contig	URMITE	SAMEA47410918	GCA_900155555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/555/GCA_900155555.1_PRJEB18028	-	Marseille-P3194
Virgibacillus siamensis	480071	PRJEB19320	371342	Terrabacteria group	Firmicutes	3.91796	41.1	-	FUIH01	7	3895	3777	2/9/17	4/17/17	Contig	URMITE	SAMEA78895918	GCA_900162695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/695/GCA_900162695.1_PRJEB19320	-	Marseille-P2607
Vibrio ruber DSM 16370	1123498	PRJEB17790	357218	Proteobacteria	Gammaproteobacteria	4.623	45.8	-	FULE01	103	4107	3871	2/11/17	4/17/17	Contig	UVEG	SAMEA78797668	GCA_900163965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/965/GCA_900163965.1_V_ruber_CECT7878T_Velvet_Prokka_EMBL	-	CECT 7878
Salinivibrio sharmensis	390883	PRJNA368794	368794	Proteobacteria	Gammaproteobacteria	3.32689	50.3	-	MUFC01	40	3080	2944	2/14/17	5/9/17	Contig	Universidad de Sevilla	SAMN06272988	GCA_001995985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/985/GCA_001995985.1_ASM199598v1	-	DSM 18182
Salinivibrio siamensis	414286	PRJNA368793	368793	Proteobacteria	Gammaproteobacteria	3.44218	50.4	-	MUFB01	61	3175	3028	2/14/17	5/9/17	Contig	Universidad de Sevilla	SAMN06272987	GCA_001996005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/005/GCA_001996005.1_ASM199600v1	-	JCM 14472
Salinivibrio proteolyticus	334715	PRJNA368810	368810	Proteobacteria	Gammaproteobacteria	3.6035	49.8	-	MUFP01	51	3381	3225	2/14/17	5/9/17	Contig	Universidad de Sevilla	SAMN06273037	GCA_001996165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/165/GCA_001996165.1_ASM199616v1	-	DSM 19052
Candidatus Tremblaya princeps	189385	PRJEB12071	316508	Proteobacteria	Betaproteobacteria	0.14334	57.8	chromosome I:LN999057.1	-	1	174	116	3/26/16	3/26/16	Complete Genome	UNIVERSITY OF SOUTH BOHEMIA	SAMEA3723485	GCA_900010165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/165/GCA_900010165.1_TPTPER	-	-
Nocardiopsis sinuspersici	501010	PRJNA321810	321810	Terrabacteria group	Actinobacteria	6.1195	71.6	-	MCOK01	4	5308	5097	2/13/17	2/22/17	Scaffold	Helmholtz Centre for Infection Research	SAMN05003997	GCA_001998325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/325/GCA_001998325.1_ASM199832v1	-	UTMC102
Rodentibacter heylii	1906744	PRJNA343597	343597	Proteobacteria	Gammaproteobacteria	2.32666	37.4	-	MLAA01	75	2150	2014	2/15/17	4/17/17	Contig	University of Copenhagen	SAMN05858751	GCA_001998905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/905/GCA_001998905.1_ASM199890v1	-	1998236014
Spirochaeta africana DSM 8902	889378	PRJNA52939	52939	Spirochaetes	Spirochaetia	3.28586	57.8	chromosome:NC_017098.1/CP003282.1	-	1	2851	2781	4/2/12	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02232053	GCA_000242595.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/595/GCA_000242595.3_ASM24259v3	-	DSM 8902
Mycobacterium leprae Br4923	561304	PRJEA31271	31271	Terrabacteria group	Actinobacteria	3.26807	57.8	chromosome:NC_011896.1/FM211192.1	-	1	2951	2131	1/10/09	4/7/17	Complete Genome	Institut Pasteur	SAMEA2271916	GCA_000026685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/685/GCA_000026685.1_ASM2668v1	19881526	-
Desulfotomaculum copahuensis	1838280	PRJNA319015	319015	Terrabacteria group	Firmicutes	3.62879	57.1	-	LYVF01	205	3520	3366	6/3/16	3/2/17	Contig	CINDEFI	SAMN04875414	GCA_001655685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/685/GCA_001655685.1_ASM165568v1	-	LMa1
Rhizobium rhizosphaerae	1672749	PRJNA344723	344723	Proteobacteria	Alphaproteobacteria	5.53723	64.5	-	MKIO01	48	4878	4697	1/6/17	3/2/17	Scaffold	Chinese Academy of Agricultural Sciences	SAMN05832038	GCA_001938945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/945/GCA_001938945.1_ASM193894v1	-	MH17
Thermosipho affectus	660294	PRJNA231770	231770	Thermotogae	Thermotogae	1.77102	31.3	-	LBFC01	27	1816	1740	2/8/17	4/17/17	Contig	University of Oslo	SAMN03483421	GCA_001990485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/485/GCA_001990485.1_ASM199048v1	-	ik275mar
Candidatus Scalindua rubra	1872076	PRJNA327439	327439	PVC group	Planctomycetes	5.19426	37.3	-	MAYW01	443	5285	5235	9/13/16	9/13/16	Contig	Radboud University Nijmegen	SAMN05368398	GCA_001723765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/765/GCA_001723765.1_ASM172376v1	-	-
Desulfovibrio alaskensis G20	207559	PRJNA329	329	Proteobacteria	delta/epsilon subdivisions	3.73023	57.8	chromosome:NC_007519.1/CP000112.1	-	1	3468	3339	10/28/05	4/6/17	Complete Genome	DOE Joint Genome Institute	SAMN02598492	GCA_000012665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/665/GCA_000012665.1_ASM1266v1	21685289	G20
Acinetobacter genomosp. 33YU	1675530	PRJNA287473	287473	Proteobacteria	Gammaproteobacteria	3.98326	38.5	-	LFZQ01	58	3797	3608	2/9/17	4/6/17	Scaffold	"Sir Run Run Shaw hospital, School of Medicine, Zhejiang University"	SAMN03782444	GCA_001990725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/725/GCA_001990725.1_ASM199072v1	-	A354
Mycobacterium leprae TN	272631	PRJNA90	90	Terrabacteria group	Actinobacteria	3.2682	57.8	chromosome:NC_002677.1/AL450380.1	-	1	2770	1605	10/2/01	8/28/16	Complete Genome	Sanger Institute	SAMEA1705921	GCA_000195855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/855/GCA_000195855.1_ASM19585v1	"844,602,711,234,002"	TN
Rodentibacter mrazii	1908257	PRJNA343597	343597	Proteobacteria	Gammaproteobacteria	2.4847	40	-	MLHG01	136	2443	2299	2/15/17	4/17/17	Contig	University of Copenhagen	SAMN05892226	GCA_001998825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/825/GCA_001998825.1_ASM199882v1	-	ppn418
Klebsiella quasipneumoniae	1463165	PRJNA307517	307517	Proteobacteria	Gammaproteobacteria	5.51386	57.7647	chromosome:NZ_CP014696.2/CP014696.2; plasmid pKQPS1:NZ_CP014697.2/CP014697.2; plasmid pKQPS2:NZ_CP014698.2/CP014698.2	-	3	5530	5226	3/22/16	2/21/17	Complete Genome	The Unniversity of Queensland	SAMN04382091	GCA_001596075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/075/GCA_001596075.2_ASM159607v2	27231369	ATCC 700603
Cronobacter dublinensis subsp. dublinensis LMG 23823	1159554	PRJNA291037	291037	Proteobacteria	Gammaproteobacteria	4.6284	57.7574	chromosome:NZ_CP012266.1/CP012266.1; plasmid pCDU1:NZ_CP012267.1/CP012267.1	-	2	4437	4225	9/1/15	4/11/17	Complete Genome	Nestle Institute of Health Sciences	SAMN03938717	GCA_001277235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/235/GCA_001277235.1_ASM127723v1	27013041	LMG 23823
Rodentibacter rarus	1908260	PRJNA343597	343597	Proteobacteria	Gammaproteobacteria	2.44567	40.4	-	MLHJ01	163	2415	2213	2/15/17	4/17/17	Contig	University of Copenhagen	SAMN05892255	GCA_001998965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/965/GCA_001998965.1_ASM199896v1	-	CCUG17206
Nocardia donostiensis	1538463	PRJNA304984	304984	Terrabacteria group	Actinobacteria	5.77271	66.6	-	LOKT01	38	5167	4884	4/6/17	4/8/17	Contig	CDC	SAMN04312206	GCA_002081795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/795/GCA_002081795.1_ASM208179v1	26914251	W9944
Cronobacter muytjensii ATCC 51329	1159613	PRJNA291037	291037	Proteobacteria	Gammaproteobacteria	4.36411	57.7	chromosome:NZ_CP012268.1/CP012268.1	-	1	4152	3938	9/1/15	4/11/17	Complete Genome	Nestle Institute of Health Sciences	SAMN03938713	GCA_001277195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/195/GCA_001277195.1_ASM127719v1	27013041	ATCC 51329
Rodentibacter trehalosifermentans	1908263	PRJNA343597	343597	Proteobacteria	Gammaproteobacteria	2.41498	41.1	-	MLHM01	152	2416	2203	2/15/17	4/17/17	Contig	University of Copenhagen	SAMN05892269	GCA_001999265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/265/GCA_001999265.1_ASM199926v1	-	H1998003092
Rodentibacter genomosp. 1	1908264	PRJNA343597	343597	Proteobacteria	Gammaproteobacteria	2.35187	40	-	MLHN01	51	2308	2173	2/15/17	4/17/17	Contig	University of Copenhagen	SAMN05892282	GCA_001999285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/285/GCA_001999285.1_ASM199928v1	-	ppn416
Rodentibacter myodis	1907939	PRJNA343597	343597	Proteobacteria	Gammaproteobacteria	2.46628	41	-	MLHQ01	54	2412	2253	2/15/17	4/17/17	Contig	University of Copenhagen	SAMN05898504	GCA_001999305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/305/GCA_001999305.1_ASM199930v1	-	Ac151
Rodentibacter sp. Ppn85	1908525	PRJNA343597	343597	Proteobacteria	Gammaproteobacteria	2.45178	40.2	-	MLHS01	106	2322	2159	2/15/17	4/17/17	Contig	University of Copenhagen	SAMN05901964	GCA_001999335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/335/GCA_001999335.1_ASM199933v1	-	Ppn85
Rodentibacter genomosp. 2	1908266	PRJNA343597	343597	Proteobacteria	Gammaproteobacteria	2.51293	39.8	-	MLHP01	77	2435	2293	2/15/17	4/17/17	Contig	University of Copenhagen	SAMN05892295	GCA_001999425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/425/GCA_001999425.1_ASM199942v1	-	ppn422
Sinomonas mesophila	1531955	PRJNA360565	360565	Terrabacteria group	Actinobacteria	4.0082	71.1	-	MTIC01	47	3605	3445	2/10/17	4/17/17	Scaffold	Sun Yat-sen University	SAMN06212359	GCA_001999765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/765/GCA_001999765.1_ASM199976v1	-	MPKL 26
Halioglobus japonicus	930805	PRJNA355352	355352	Proteobacteria	Gammaproteobacteria	4.11636	57.6995	chromosome:NZ_CP019450.1/CP019450.1; plasmid unnamed1:NZ_CP019451.1/CP019451.1; plasmid unnamed2:NZ_CP019452.1/CP019452.1; plasmid unnamed3:NZ_CP019453.1/CP019453.1	-	4	3895	3609	2/3/17	4/17/17	Complete Genome	"Atmosphere and Ocean Research Institute, The University of Tokyo"	SAMN06075353	GCA_001983995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/995/GCA_001983995.1_ASM198399v1	-	NBRC 107739
Colwellia aestuarii	329993	PRJNA371561	371561	Proteobacteria	Gammaproteobacteria	4.28873	38.6	-	MUZV01	33	3804	3669	2/15/17	4/17/17	Scaffold	Shandong University at Weihai	SAMN06309651	GCA_002000025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/025/GCA_002000025.1_ASM200002v1	16403863	KCTC 12480
Rhizobium flavum	1335061	PRJNA371541	371541	Proteobacteria	Alphaproteobacteria	4.6591	61.6	-	MUXO01	52	4551	4329	2/15/17	4/17/17	Scaffold	DSMZ	SAMN06309512	GCA_002000045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/045/GCA_002000045.1_ASM200004v1	-	YW14
Marinicella sp. F2	1792834	PRJNA371655	371655	Proteobacteria	Gammaproteobacteria	3.98998	48.1	-	MVBD01	44	3470	3366	2/15/17	4/17/17	Scaffold	Shandong University at Weihai	SAMN06310781	GCA_002000055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/055/GCA_002000055.1_ASM200005v1	-	F2
Rodentibacter heidelbergensis	1908258	PRJNA343597	343597	Proteobacteria	Gammaproteobacteria	2.03309	41.4	-	MLHH01	34	1954	1851	2/15/17	4/17/17	Contig	University of Copenhagen	SAMN05892232	GCA_002000125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/125/GCA_002000125.1_ASM200012v1	-	Ac69
Rodentibacter ratti	1906745	PRJNA343597	343597	Proteobacteria	Gammaproteobacteria	2.19237	40.1	-	MLAG01	72	2128	2007	2/15/17	4/17/17	Contig	University of Copenhagen	SAMN05860624	GCA_002000145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/145/GCA_002000145.1_ASM200014v1	-	Ac81
Thioalkalivibrio denitrificans	108003	PRJNA373980	373980	Proteobacteria	Gammaproteobacteria	3.63935	64.6	-	MVBK01	167	3448	3295	2/15/17	4/17/17	Scaffold	University of Amsterdam	SAMN06319236	GCA_002000365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/365/GCA_002000365.1_ASM200036v1	-	ALJD
Thermofilum pendens Hrk 5	368408	PRJNA16331	16331	TACK group	Crenarchaeota	1.81339	57.6792	chromosome:NC_008698.1/CP000505.1; plasmid pTPEN01:NC_008696.1/CP000506.1	-	2	1926	1866	12/18/06	8/21/15	Complete Genome	DOE Joint Genome Institute	SAMN02598366	GCA_000015225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/225/GCA_000015225.1_ASM1522v1	-	Hrk 5
Kozakia baliensis	153496	PRJNA311264	311264	Proteobacteria	Alphaproteobacteria	3.09358	57.6407	chromosome:NZ_CP014681.1/CP014681.1; plasmid pKB16680_1:NZ_CP014682.1/CP014682.1; plasmid pKB16680_2:NZ_CP014683.1/CP014683.1; plasmid pKB16680_3:NZ_CP014684.1/CP014684.1; plasmid pKB16680_4:NZ_CP014685.1/CP014685.1; plasmid pKB16680_5:NZ_CP014686.1/CP014686.1	-	6	2953	2786	10/19/16	4/13/17	Complete Genome	Technische Universitaet Muenchen	SAMN04396915	GCA_001787355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/355/GCA_001787355.1_ASM178735v1	27716345	NBRC 16680
Pasteurellaceae bacterium 15-036681	1924934	PRJNA352711	352711	Proteobacteria	Gammaproteobacteria	2.54517	38.8	-	MQVI01	132	2411	2289	2/16/17	4/17/17	Contig	USDA APHIS VS NVSL	SAMN05991021	GCA_002002485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/485/GCA_002002485.1_ASM200248v1	-	15-036681
Klebsiella pneumoniae	573	PRJNA317547	317547	Proteobacteria	Gammaproteobacteria	5.26485	57.6	chromosome:NZ_CP015120.1/CP015120.1	-	1	5227	4994	5/2/17	5/6/17	Complete Genome	USAMRIID	SAMN04621179	GCA_002116885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/116/885/GCA_002116885.1_ASM211688v1	-	kp757
Caenibacillus caldisaponilyticus	1674942	PRJDB4782	369377	Terrabacteria group	Firmicutes	3.35612	51.8	-	BDDQ01	181	3388	3099	1/28/17	4/20/17	Contig	Kyoto Prefectural University	SAMD00051327	GCA_002003465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/003/465/GCA_002003465.1_B157_assembly01	"2,711,726,828,360,160"	B157
Pedobacter himalayensis	246796	PRJNA252799	252799	FCB group	Bacteroidetes/Chlorobi group	4.67912	55.6	-	MPZO01	85	4493	4280	2/17/17	4/17/17	Contig	Centre for Cellular and Molecular Biology	SAMN03159271	GCA_002003685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/003/685/GCA_002003685.1_ASM200368v1	-	HHS 22
Bombella intestini	1539051	PRJNA235371	235371	Proteobacteria	Alphaproteobacteria	2.02318	54.9	-	JATM01	12	1846	1784	2/17/17	4/17/17	Contig	Ghent University	SAMN02598725	GCA_002003665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/003/665/GCA_002003665.1_ASM200366v1	27851750	R-52487
Methylocaldum sp. 14B	1912213	PRJNA349985	349985	Proteobacteria	Gammaproteobacteria	5.62144	58.2	-	MSCV01	85	5077	4911	2/21/17	2/23/17	Contig	The Ohio State University	SAMN05933571	GCA_002005105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/105/GCA_002005105.1_14B	-	14B
Pyramidobacter sp. C12-8	1943580	PRJNA362832	362832	Synergistetes	Synergistia	2.66834	60.3	-	MUHX01	182	2415	2288	2/27/17	3/2/17	Contig	CSIRO	SAMN06283951	GCA_002007215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/215/GCA_002007215.1_ASM200721v1	-	C12-8
Gammaproteobacteria bacterium Gsub	1615892	PRJNA275177	275177	Proteobacteria	Gammaproteobacteria	1.37185	38.2	-	JYIN01	14	-	-	2/27/17	2/27/17	Contig	Hong Kong University of Science and Technology	SAMN03339796	GCA_002007405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/405/GCA_002007405.1_ASM200740v1	-	-
Chromatiales bacterium USCg_Taylor	1934255	PRJNA361027	361027	Proteobacteria	Gammaproteobacteria	2.96168	60	-	MUGK01	246	3054	3012	2/27/17	2/27/17	Scaffold	Princeton University	SAMN06219543	GCA_002007425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/425/GCA_002007425.1_USCg1.0	-	-
Akkermansia glycaniphila	1679444	PRJEB15121	341763	PVC group	Verrucomicrobia	3.07408	57.6	chromosome I:NZ_LT629973.1/LT629973.1	-	1	2575	2493	10/27/16	4/13/17	Complete Genome	"WAGENINGEN UNIVERSITY, LABORATORY OF SYSTEMS AND SYNTHETIC BIOLOGY."	SAMEA4378782	GCA_900097105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/105/GCA_900097105.1_WK001	-	-
Klebsiella variicola	244366	PRJNA272370	272370	Proteobacteria	Gammaproteobacteria	5.5212	57.6	chromosome:NZ_CP010523.2/CP010523.2	-	1	5458	5200	1/21/15	2/21/17	Complete Genome	Zhejiang university	SAMN01174581	GCA_000828055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/055/GCA_000828055.2_ASM82805v2	-	DSM 15968
Rhizobium sophorae	1535242	PRJNA355900	355900	Proteobacteria	Alphaproteobacteria	6.91326	61.2	-	MRDK01	71	6735	6302	2/28/17	3/2/17	Contig	"Northeast institute of Geography and Agroecology, Chinese Academy of Sciences"	SAMN06094795	GCA_002008155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/008/155/GCA_002008155.1_ASM200815v1	-	CCBAU 03386
Rhizobium laguerreae	1076926	PRJNA355904	355904	Proteobacteria	Alphaproteobacteria	7.32321	60.8	-	MRDM01	33	7236	6833	2/28/17	3/2/17	Contig	"Northeast institute of Geography and Agroecology, Chinese Academy of Sciences"	SAMN06094799	GCA_002008165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/008/165/GCA_002008165.1_ASM200816v1	-	FB206
Microbulbifer mangrovi	927787	PRJNA324768	324768	Proteobacteria	Gammaproteobacteria	4.50755	57.2	-	LZDE01	347	3694	3544	3/1/17	3/3/17	Contig	Goa University	SAMN05214359	GCA_002009015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/015/GCA_002009015.1_ASM200901v1	28161851	DD-13
Klebsiella pneumoniae	573	PRJNA261555	261555	Proteobacteria	Gammaproteobacteria	5.11888	57.6	chromosome:NZ_CP009461.1/CP009461.1	-	1	5051	4845	11/13/14	2/21/17	Complete Genome	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN02649400	GCA_000775955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/955/GCA_000775955.1_ASM77595v1	25540349	XH209
Candidatus Brocadia caroliniensis	1004156	PRJNA228949	228949	PVC group	Planctomycetes	3.7282	43.5	-	AYTS01	209	3683	3263	3/2/17	3/2/17	Contig	columbia university	SAMN04504644	GCA_002009475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/475/GCA_002009475.1_ASM200947v1	28088723	-
Bacillus oleronius	38875	PRJNA362282	362282	Terrabacteria group	Firmicutes	5.08397	35	-	MTLA01	587	5080	4751	3/2/17	4/17/17	Scaffold	National Institute for Communicable Diseases	SAMN06237156	GCA_002009555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/555/GCA_002009555.1_ASM200955v1	28386530	DSM 9356
Candidatus Phytoplasma aurantifolia	180978	PRJNA376491	376491	Terrabacteria group	Tenericutes	0.474669	23.9	-	MWKN01	98	423	370	3/2/17	3/4/17	Contig	INRA	SAMN06434186	GCA_002009625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/625/GCA_002009625.1_ASM200962v1	-	WBDL
Candidatus Bathyarchaeota archaeon JdFR-05	1935113	PRJNA269163	269163	TACK group	Candidatus Bathyarchaeota	0.433479	42.6	-	MTLS01	101	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226322	GCA_002009955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/955/GCA_002009955.1_ASM200995v1	28350381	-
Methanothermococcus sp. JdFR-03	1935054	PRJNA269163	269163	Euryarchaeota	Methanococci	1.47625	33.1	-	MTLQ01	164	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226320	GCA_002009965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/965/GCA_002009965.1_ASM200996v1	28350381	-
Candidatus Bathyarchaeota archaeon JdFR-10	1935118	PRJNA269163	269163	TACK group	Candidatus Bathyarchaeota	1.81775	51.8	-	MTLX01	57	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226327	GCA_002009985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/985/GCA_002009985.1_ASM200998v1	28350381	-
Methanopyri archaeon JdFR-15	1935141	PRJNA269163	269163	Euryarchaeota	Methanopyri	0.207909	36.1	-	MTMC01	54	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226332	GCA_002010035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/035/GCA_002010035.1_ASM201003v1	28350381	-
Archaeoglobus sp. JdFR-22	1934979	PRJNA269163	269163	Euryarchaeota	Archaeoglobi	2.06253	39.8	-	MTMJ01	130	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226339	GCA_002010045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/045/GCA_002010045.1_ASM201004v1	28350381	-
Candidatus Hydrothermarchaeota archaeon JdFR-16	1935127	PRJNA269163	269163	Euryarchaeota	unclassified Euryarchaeota	1.35311	49.7	-	MTMD01	241	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226333	GCA_002010065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/065/GCA_002010065.1_ASM201006v1	28350381	-
Methanomicrobia archaeon JdFR-19	1935140	PRJNA269163	269163	Euryarchaeota	Methanomicrobia	1.28868	43.2	-	MTMG01	27	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226336	GCA_002010075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/075/GCA_002010075.1_ASM201007v1	28350381	-
Archaeoglobi archaeon JdFR-42	1935016	PRJNA269163	269163	Euryarchaeota	Archaeoglobi	2.14862	40.2	-	MTND01	42	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226359	GCA_002010305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/305/GCA_002010305.1_ASM201030v1	28350381	-
Candidatus Acetothermia bacterium JdFR-49	1935103	PRJNA269163	269163	unclassified Bacteria	Bacteria candidate phyla	1.69865	59.9	-	MTNK01	312	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226366	GCA_002010355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/355/GCA_002010355.1_ASM201035v1	28350381	-
Candidatus Acetothermia bacterium JdFR-50	1935104	PRJNA269163	269163	unclassified Bacteria	Bacteria candidate phyla	1.29228	61.9	-	MTNL01	255	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226367	GCA_002010365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/365/GCA_002010365.1_ASM201036v1	28350381	-
Candidatus Acetothermia bacterium JdFR-52	1935106	PRJNA269163	269163	unclassified Bacteria	Bacteria candidate phyla	1.7106	63.1	-	MTNN01	155	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226369	GCA_002010385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/385/GCA_002010385.1_ASM201038v1	28350381	-
bacterium JdFR-53	1935010	PRJNA269163	269163	unclassified Bacteria	unclassified Bacteria (miscellaneous)	0.346303	38.3	-	MTNO01	76	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226370	GCA_002010435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/435/GCA_002010435.1_ASM201043v1	28350381	-
Anaerolineales bacterium JdFR-60	1935095	PRJNA269163	269163	Terrabacteria group	Chloroflexi	0.863183	64.4	-	MTNV01	239	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226377	GCA_002010475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/475/GCA_002010475.1_ASM201047v1	28350381	-
Anaerolineales bacterium JdFR-62	1935097	PRJNA269163	269163	Terrabacteria group	Chloroflexi	0.906207	52.1	-	MTNX01	183	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226379	GCA_002010515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/515/GCA_002010515.1_ASM201051v1	28350381	-
Thermoanaerobacterales bacterium JdFR-68	1935151	PRJNA269163	269163	Terrabacteria group	Firmicutes	2.97565	39.9	-	MTOD01	458	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226385	GCA_002010535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/535/GCA_002010535.1_ASM201053v1	28350381	-
bacterium JdFR-67	1935013	PRJNA269163	269163	unclassified Bacteria	unclassified Bacteria (miscellaneous)	0.873684	40.7	-	MTOC01	172	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226384	GCA_002010555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/555/GCA_002010555.1_ASM201055v1	28350381	-
Anaerolineales bacterium JdFR-64	1935099	PRJNA269163	269163	Terrabacteria group	Chloroflexi	2.35838	52.5	-	MTNZ01	468	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226381	GCA_002010545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/545/GCA_002010545.1_ASM201054v1	28350381	-
Peptococcaceae bacterium JdFR-69	1935150	PRJNA269163	269163	Terrabacteria group	Firmicutes	1.77999	61.2	-	MTOE01	36	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226386	GCA_002010595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/595/GCA_002010595.1_ASM201059v1	28350381	-
bacterium JdFR-70	1935014	PRJNA269163	269163	unclassified Bacteria	unclassified Bacteria (miscellaneous)	0.9211	35.8	-	MTOF01	214	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226387	GCA_002010615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/615/GCA_002010615.1_ASM201061v1	28350381	-
Candidatus Hydrothermae bacterium JdFR-71	1935122	PRJNA269163	269163	unclassified Bacteria	Bacteria candidate phyla	1.70202	34.8	-	MTOG01	18	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226388	GCA_002010635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/635/GCA_002010635.1_ASM201063v1	28350381	-
Candidatus Hydrothermae bacterium JdFR-74	1935125	PRJNA269163	269163	unclassified Bacteria	Bacteria candidate phyla	1.80062	32.8	-	MTOJ01	267	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226391	GCA_002010655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/655/GCA_002010655.1_ASM201065v1	28350381	-
Candidatus Aminicenantes bacterium JdFR-78	1935108	PRJNA269163	269163	unclassified Bacteria	Bacteria candidate phyla	2.53007	32.6	-	MTON01	42	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226395	GCA_002010665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/665/GCA_002010665.1_ASM201066v1	28350381	-
Candidatus Aminicenantes bacterium JdFR-77	1935107	PRJNA269163	269163	unclassified Bacteria	Bacteria candidate phyla	2.32624	30.4	-	MTOM01	200	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226394	GCA_002010685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/685/GCA_002010685.1_ASM201068v1	28350381	-
Candidatus Aminicenantes bacterium JdFR-79	1935109	PRJNA269163	269163	unclassified Bacteria	Bacteria candidate phyla	2.04603	32.6	-	MTOO01	32	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226396	GCA_002010715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/715/GCA_002010715.1_ASM201071v1	28350381	-
Candidatus Aminicenantes bacterium JdFR-80	1935110	PRJNA269163	269163	unclassified Bacteria	Bacteria candidate phyla	2.9147	44.5	-	MTOP01	113	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226397	GCA_002010725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/725/GCA_002010725.1_ASM201072v1	28350381	-
Nitrospirae bacterium JdFR-87	1935148	PRJNA269163	269163	Nitrospirae	unclassified Nitrospirae	1.86108	62.7	-	MTOW01	58	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226404	GCA_002010755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/755/GCA_002010755.1_ASM201075v1	28350381	-
Nitrospirae bacterium JdFR-84	1935145	PRJNA269163	269163	Nitrospirae	unclassified Nitrospirae	1.52614	39.8	-	MTOT01	342	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226401	GCA_002010775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/775/GCA_002010775.1_ASM201077v1	28350381	-
Caulobacteraceae bacterium JdFR-89	1935130	PRJNA269163	269163	Proteobacteria	Alphaproteobacteria	4.05529	67.5	-	MTOY01	650	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226406	GCA_002010795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/795/GCA_002010795.1_ASM201079v1	28350381	-
Candidatus Bathyarchaeota archaeon JdFR-01	1935111	PRJNA269163	269163	TACK group	Candidatus Bathyarchaeota	0.200493	38.2	-	MTLO01	53	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226318	GCA_002010885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/885/GCA_002010885.1_ASM201088v1	28350381	-
Candidatus Bathyarchaeota archaeon JdFR-04	1935112	PRJNA269163	269163	TACK group	Candidatus Bathyarchaeota	1.06795	41.9	-	MTLR01	204	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226321	GCA_002010925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/925/GCA_002010925.1_ASM201092v1	28350381	-
Desulfarculaceae bacterium JdFR-97	1935136	PRJNA269163	269163	Proteobacteria	delta/epsilon subdivisions	4.10256	57.6	-	MTPG01	127	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226414	GCA_002010915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/915/GCA_002010915.1_ASM201091v1	28350381	-
Candidatus Bathyarchaeota archaeon JdFR-06	1935114	PRJNA269163	269163	TACK group	Candidatus Bathyarchaeota	0.735249	38.3	-	MTLT01	72	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226323	GCA_002010955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/955/GCA_002010955.1_ASM201095v1	28350381	-
Candidatus Bathyarchaeota archaeon JdFR-07	1935115	PRJNA269163	269163	TACK group	Candidatus Bathyarchaeota	0.907597	38.7	-	MTLU01	43	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226324	GCA_002010975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/975/GCA_002010975.1_ASM201097v1	28350381	-
Candidatus Bathyarchaeota archaeon JdFR-08	1935116	PRJNA269163	269163	TACK group	Candidatus Bathyarchaeota	0.919095	38.6	-	MTLV01	45	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226325	GCA_002010995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/995/GCA_002010995.1_ASM201099v1	28350381	-
Candidatus Bathyarchaeota archaeon JdFR-09	1935117	PRJNA269163	269163	TACK group	Candidatus Bathyarchaeota	0.498537	39	-	MTLW01	16	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226326	GCA_002011005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/005/GCA_002011005.1_ASM201100v1	28350381	-
Candidatus Bathyarchaeota archaeon JdFR-11	1935119	PRJNA269163	269163	TACK group	Candidatus Bathyarchaeota	1.72573	51.9	-	MTLY01	12	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226328	GCA_002011035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/035/GCA_002011035.1_ASM201103v1	28350381	-
Crenarchaeota archaeon JdFR-12	1935132	PRJNA269163	269163	TACK group	Crenarchaeota	0.301027	37.3	-	MTLZ01	65	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226329	GCA_002011055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/055/GCA_002011055.1_ASM201105v1	28350381	-
Candidatus Geothermarchaeota archaeon JdFR-13	1935120	PRJNA269163	269163	TACK group	Candidatus Geothermarchaeota	1.67187	37.6	-	MTMA01	4	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226330	GCA_002011075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/075/GCA_002011075.1_ASM201107v1	28350381	-
Candidatus Geothermarchaeota archaeon JdFR-14	1935121	PRJNA269163	269163	TACK group	Candidatus Geothermarchaeota	1.63502	42	-	MTMB01	6	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226331	GCA_002011085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/085/GCA_002011085.1_ASM201108v1	28350381	-
Candidatus Hydrothermarchaeota archaeon JdFR-17	1935128	PRJNA269163	269163	Euryarchaeota	unclassified Euryarchaeota	2.17813	49.6	-	MTME01	344	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226334	GCA_002011115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/115/GCA_002011115.1_ASM201111v1	28350381	-
Candidatus Hydrothermarchaeota archaeon JdFR-18	1935129	PRJNA269163	269163	Euryarchaeota	unclassified Euryarchaeota	2.06213	39.1	-	MTMF01	22	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226335	GCA_002011125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/125/GCA_002011125.1_ASM201112v1	28350381	-
Euryarchaeota archaeon JdFR-20	1935138	PRJNA269163	269163	Euryarchaeota	unclassified Euryarchaeota	1.60969	41	-	MTMH01	209	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226337	GCA_002011155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/155/GCA_002011155.1_ASM201115v1	28350381	-
Euryarchaeota archaeon JdFR-21	1935139	PRJNA269163	269163	Euryarchaeota	unclassified Euryarchaeota	1.4165	41.2	-	MTMI01	22	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226338	GCA_002011165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/165/GCA_002011165.1_ASM201116v1	28350381	-
Thermoplasmatales archaeon JdFR-43	1935152	PRJNA269163	269163	Euryarchaeota	Thermoplasmata	1.23094	37.8	-	MTNE01	219	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226360	GCA_002011355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/355/GCA_002011355.1_ASM201135v1	28350381	-
Candidatus Acetothermia bacterium JdFR-46	1935100	PRJNA269163	269163	unclassified Bacteria	Bacteria candidate phyla	1.08807	65.4	-	MTNH01	254	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226363	GCA_002011365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/365/GCA_002011365.1_ASM201136v1	28350381	-
Candidatus Acetothermia bacterium JdFR-47	1935101	PRJNA269163	269163	unclassified Bacteria	Bacteria candidate phyla	1.62229	63.8	-	MTNI01	230	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226364	GCA_002011415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/415/GCA_002011415.1_ASM201141v1	28350381	-
Candidatus Acetothermia bacterium JdFR-48	1935102	PRJNA269163	269163	unclassified Bacteria	Bacteria candidate phyla	1.89313	61.2	-	MTNJ01	62	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226365	GCA_002011425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/425/GCA_002011425.1_ASM201142v1	28350381	-
Candidatus Acetothermia bacterium JdFR-51	1935105	PRJNA269163	269163	unclassified Bacteria	Bacteria candidate phyla	1.76384	63	-	MTNM01	185	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226368	GCA_002011435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/435/GCA_002011435.1_ASM201143v1	28350381	-
Chloroflexi bacterium JdFR-59	1935131	PRJNA269163	269163	Terrabacteria group	Chloroflexi	2.03916	61	-	MTNU01	527	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226376	GCA_002011535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/535/GCA_002011535.1_ASM201153v1	28350381	-
Anaerolineales bacterium JdFR-61	1935096	PRJNA269163	269163	Terrabacteria group	Chloroflexi	2.90676	64.1	-	MTNW01	380	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226378	GCA_002011555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/555/GCA_002011555.1_ASM201155v1	28350381	-
bacterium JdFR-65	1935011	PRJNA269163	269163	unclassified Bacteria	unclassified Bacteria (miscellaneous)	0.936826	42	-	MTOA01	193	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226382	GCA_002011565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/565/GCA_002011565.1_ASM201156v1	28350381	-
bacterium JdFR-66	1935012	PRJNA269163	269163	unclassified Bacteria	unclassified Bacteria (miscellaneous)	1.83855	40.4	-	MTOB01	224	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226383	GCA_002011575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/575/GCA_002011575.1_ASM201157v1	28350381	-
Candidatus Hydrothermae bacterium JdFR-72	1935123	PRJNA269163	269163	unclassified Bacteria	Bacteria candidate phyla	2.0598	34.8	-	MTOH01	19	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226389	GCA_002011615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/615/GCA_002011615.1_ASM201161v1	28350381	-
Candidatus Hydrothermae bacterium JdFR-75	1935126	PRJNA269163	269163	unclassified Bacteria	Bacteria candidate phyla	0.789045	32	-	MTOK01	171	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226392	GCA_002011635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/635/GCA_002011635.1_ASM201163v1	28350381	-
Anaerolineales bacterium JdFR-63	1935098	PRJNA269163	269163	Terrabacteria group	Chloroflexi	1.31804	52.3	-	MTNY01	282	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226380	GCA_002011655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/655/GCA_002011655.1_ASM201165v1	28350381	-
Candidatus Hydrothermae bacterium JdFR-73	1935124	PRJNA269163	269163	unclassified Bacteria	Bacteria candidate phyla	1.30543	32.6	-	MTOI01	257	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226390	GCA_002011675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/675/GCA_002011675.1_ASM201167v1	28350381	-
Deferribacteres bacterium JdFR-76	1935133	PRJNA269163	269163	Deferribacteres	Deferribacteres	3.09991	51.8	-	MTOL01	557	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226393	GCA_002011685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/685/GCA_002011685.1_ASM201168v1	28350381	-
Nitrospirae bacterium JdFR-83	1935144	PRJNA269163	269163	Nitrospirae	unclassified Nitrospirae	1.16508	42.1	-	MTOS01	177	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226400	GCA_002011715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/715/GCA_002011715.1_ASM201171v1	28350381	-
Nitrospirae bacterium JdFR-81	1935142	PRJNA269163	269163	Nitrospirae	unclassified Nitrospirae	2.05028	48.3	-	MTOQ01	95	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226398	GCA_002011735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/735/GCA_002011735.1_ASM201173v1	28350381	-
Nitrospirae bacterium JdFR-85	1935146	PRJNA269163	269163	Nitrospirae	unclassified Nitrospirae	2.3259	41.5	-	MTOU01	47	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226402	GCA_002011745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/745/GCA_002011745.1_ASM201174v1	28350381	-
Nitrospirae bacterium JdFR-82	1935143	PRJNA269163	269163	Nitrospirae	unclassified Nitrospirae	0.735991	43.7	-	MTOR01	154	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226399	GCA_002011775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/775/GCA_002011775.1_ASM201177v1	28350381	-
Nitrospirae bacterium JdFR-88	1935149	PRJNA269163	269163	Nitrospirae	unclassified Nitrospirae	1.85835	62.8	-	MTOX01	22	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226405	GCA_002011795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/795/GCA_002011795.1_ASM201179v1	28350381	-
Nitrospirae bacterium JdFR-86	1935147	PRJNA269163	269163	Nitrospirae	unclassified Nitrospirae	2.10347	45.3	-	MTOV01	25	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226403	GCA_002011815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/815/GCA_002011815.1_ASM201181v1	28350381	-
Desulfarculaceae bacterium JdFR-96	1935135	PRJNA269163	269163	Proteobacteria	delta/epsilon subdivisions	1.39281	57.6	-	MTPF01	312	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226413	GCA_002011845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/845/GCA_002011845.1_ASM201184v1	28350381	-
Desulfarculaceae bacterium JdFR-95	1935134	PRJNA269163	269163	Proteobacteria	delta/epsilon subdivisions	2.80774	68.2	-	MTPE01	499	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226412	GCA_002011835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/835/GCA_002011835.1_ASM201183v1	28350381	-
Desulfarculaceae bacterium JdFR-98	1935137	PRJNA269163	269163	Proteobacteria	delta/epsilon subdivisions	0.932589	57.5	-	MTPH01	224	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226415	GCA_002011895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/895/GCA_002011895.1_ASM201189v1	28350381	-
blood disease bacterium A2-HR MARDI	1944648	PRJNA369602	369602	Proteobacteria	Betaproteobacteria	5.08976	66.4832	chromosome:NZ_CP019911.1/CP019911.1; plasmid unnamed:NZ_CP019912.1/CP019912.1	-	2	4675	4256	3/3/17	3/6/17	Chromosome	MARDI	SAMN06289803	GCA_002012345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/345/GCA_002012345.1_ASM201234v1	-	A2-HR MARDI
Marinobacter similis	1420916	PRJNA227392	227392	Proteobacteria	Gammaproteobacteria	3.9759	57.6	chromosome:NZ_CP007151.1/CP007151.1	-	1	3733	2527	2/5/14	8/8/17	Complete Genome	Swinburne University of Technology	SAMN02401946	GCA_000830985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/985/GCA_000830985.1_ASM83098v1	24855296	A3d10
Klebsiella pneumoniae CG43	1244085	PRJNA177782	177782	Proteobacteria	Gammaproteobacteria	5.16686	57.6	chromosome:NC_022566.1/CP006648.1	-	1	5079	4853	10/18/13	2/21/17	Complete Genome	National Tsing Hua University	SAMN02603668	GCA_000474015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/015/GCA_000474015.1_ASM47401v1	-	CG43
Klebsiella variicola At-22	640131	PRJNA37701	37701	Proteobacteria	Gammaproteobacteria	5.4585	57.6	chromosome:NC_013850.1/CP001891.1	-	1	5414	5176	2/16/10	2/21/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598515	GCA_000025465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/465/GCA_000025465.1_ASM2546v1	19965433	At-22
Sedimenticola thiotaurini	1543721	PRJNA282984	282984	Proteobacteria	Gammaproteobacteria	3.96228	57.5722	chromosome:NZ_CP011412.1/CP011412.1; plasmid unnamed:NZ_CP011413.1/CP011413.1	-	2	3680	3597	5/15/15	4/10/17	Complete Genome	University of Minnesota	SAMN03581174	GCA_001007875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/875/GCA_001007875.1_ASM100787v1	26089430	SIP-G1
Klebsiella pneumoniae	573	PRJNA360900	360900	Proteobacteria	Gammaproteobacteria	5.26977	57.5326	chromosome:NZ_CP019219.1/CP019219.1; plasmid pKp1756:NZ_CP019220.1/CP019220.1	-	2	5222	4985	1/17/17	2/22/17	Complete Genome	National Yang Ming University	SAMN06216564	GCA_001952835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/835/GCA_001952835.1_ASM195283v1	-	1756
Virgibacillus dokdonensis	302167	PRJEB19411	374693	Terrabacteria group	Firmicutes	4.60895	36.5	-	FUUZ01	16	4252	4028	2/16/17	2/23/17	Scaffold	URMITE	SAMEA87824668	GCA_900166595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/595/GCA_900166595.1_PRJEB19411	-	Marseille-P2545
Mycobacterium boenickei	146017	PRJEB19486	375778	Terrabacteria group	Actinobacteria	6.50691	66.8	-	FUWC01	14	6269	6012	2/18/17	2/23/17	Contig	URMITE	SAMEA92028418	GCA_900166915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/915/GCA_900166915.1_PRJEB19486	-	CIP107829
Hymenobacter sp. DG25B	1385664	PRJNA266853	266853	FCB group	Bacteroidetes/Chlorobi group	4.36003	57.5145	chromosome:NZ_CP010054.1/CP010054.1; plasmid unnamed:NZ_CP010057.1/CP010057.1; plasmid unnamed:NZ_CP010055.1/CP010055.1; plasmid unnamed:NZ_CP010056.1/CP010056.1	-	4	3755	3634	12/11/14	4/10/17	Complete Genome	Kyungpook National University	SAMN03174911	GCA_000801315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/315/GCA_000801315.1_ASM80131v1	-	DG25B
Clostridium roseum	84029	PRJNA322791	322791	Terrabacteria group	Firmicutes	4.94486	29.7	-	LZYU01	262	4480	4309	2/23/17	2/25/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05170512	GCA_002006175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/175/GCA_002006175.1_ASM200617v1	-	DSM 6424
Mucilaginibacter pedocola	1792845	PRJNA331061	331061	FCB group	Bacteroidetes/Chlorobi group	7.03511	46.1	-	MBTF01	39	6123	5956	3/3/17	3/6/17	Contig	"College of Life Science and Technology, Huazhong Agricultural University"	SAMN05436731	GCA_002013915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/915/GCA_002013915.1_ASM201391v1	-	TBZ30
Moraxella lincolnii	90241	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.07692	42.7	-	MUYT01	29	1853	1767	3/3/17	3/6/17	Scaffold	TAILORED-Treatment project	SAMN06291427	GCA_002014765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/765/GCA_002014765.1_ASM201476v1	-	CCUG 9405
Moraxella pluranimalium	470453	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.28871	45.8	-	MUYU01	50	2128	2047	3/3/17	3/6/17	Scaffold	TAILORED-Treatment project	SAMN06293379	GCA_002014825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/825/GCA_002014825.1_ASM201482v1	-	CCUG 54913
Moraxella porci DSM 25326	573983	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.179	46.6	-	MUYV01	26	2050	1961	3/3/17	3/6/17	Scaffold	TAILORED-Treatment project	SAMN06293387	GCA_002014855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/855/GCA_002014855.1_ASM201485v1	-	CCUG 54912
Moraxella canis	90239	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.14375	45.1	-	MUXT01	19	2001	1896	3/3/17	3/6/17	Scaffold	TAILORED-Treatment project	SAMN06308682	GCA_002014965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/965/GCA_002014965.1_ASM201496v1	-	CCUG 8415A
Moraxella caviae	34060	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.4981	47	-	MUXU01	118	2358	2226	3/3/17	3/6/17	Scaffold	TAILORED-Treatment project	SAMN06308687	GCA_002014985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/985/GCA_002014985.1_ASM201498v1	-	CCUG 355
Haemophilus haemoglobinophilus	733	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.29668	37	-	MUXZ01	83	2273	2107	3/3/17	3/6/17	Scaffold	TAILORED-Treatment project	SAMN06308713	GCA_002015075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/075/GCA_002015075.1_ASM201507v1	-	CCUG 3714
Haemophilus paracuniculus	734	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.04725	45.5	-	MUYA01	28	2010	1928	3/3/17	3/6/17	Scaffold	TAILORED-Treatment project	SAMN06308712	GCA_002015115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/115/GCA_002015115.1_ASM201511v1	-	CCUG 43573
[Haemophilus] felis	123822	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.36193	40	-	MUYB01	78	2266	2092	3/3/17	3/6/17	Scaffold	TAILORED-Treatment project	SAMN06308729	GCA_002015125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/125/GCA_002015125.1_ASM201512v1	-	CCUG 31170
Rhodoferax fermentans	28066	PRJNA361195	361195	Proteobacteria	Betaproteobacteria	4.46774	59.9	-	MTJN01	2	4158	4035	3/3/17	3/6/17	Contig	Korea University	SAMN06118385	GCA_002017865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/865/GCA_002017865.1_ASM201786v1	-	JCM 7819
Anaerotruncus rubiinfantis	1720200	PRJEB13168	316392	Terrabacteria group	Firmicutes	3.40903	55.1	-	FKLA01	9	3388	3281	4/23/16	3/22/17	Contig	URMITE	SAMEA3907616	GCA_900078395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/395/GCA_900078395.1_PRJEB13168	-	MT15
Urmitella timonensis	1870994	PRJEB18036	354761	Terrabacteria group	Firmicutes	2.13871	50.5	-	FQLW01	6	1827	1746	11/23/16	3/22/17	Contig	URMITE	SAMEA4555321	GCA_900120415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/415/GCA_900120415.1_PRJEB18036	-	Marseille-P2918
Klebsiella pneumoniae	573	PRJNA398333	398333	Proteobacteria	Gammaproteobacteria	5.45636	57.5	chromosome:NZ_CP022882.1/CP022882.1	-	1	5512	5261	8/24/17	8/27/17	Complete Genome	Beijing Institute of Microbiology and Epidemiology	SAMN07508215	GCA_002269295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/295/GCA_002269295.1_ASM226929v1	-	911021
Collinsella ihuae	1720204	PRJEB12547	310079	Terrabacteria group	Actinobacteria	2.83645	64.1	-	FCOU01	35	2450	2295	1/30/16	3/22/17	Contig	URMITE	SAMEA3857553	GCA_900046475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/475/GCA_900046475.1_Collinsella_ihumii	-	GD8
Bacillus obstructivus	1914540	PRJNA351908	351908	Terrabacteria group	Firmicutes	5.22075	35.2	-	MPHG01	448	4983	4780	11/28/16	3/22/17	Scaffold	Human Microbiology Institute	SAMN05958274	GCA_001887185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/185/GCA_001887185.1_ASM188718v1	28254994	VT-16-70
Clostridium aurantibutyricum	1551	PRJNA322793	322793	Terrabacteria group	Firmicutes	4.92283	29.9	-	LZYW01	221	4516	4245	2/23/17	2/25/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05170514	GCA_002006235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/235/GCA_002006235.1_ASM200623v1	-	DSM 793
Clostridium puniceum	29367	PRJNA322815	322815	Terrabacteria group	Firmicutes	6.08217	28.6	-	LZZM01	245	5326	4889	2/23/17	2/25/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05170536	GCA_002006345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/345/GCA_002006345.1_ASM200634v1	-	DSM 2619
Clostridium felsineum DSM 794	1121310	PRJNA322790	322790	Terrabacteria group	Firmicutes	5.17865	29.9	-	LZYT01	100	4788	4541	2/23/17	2/26/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05170511	GCA_002006355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/355/GCA_002006355.1_ASM200635v1	-	DSM 794
Wohlfahrtiimonas larvae	1157986	PRJNA368974	368974	Proteobacteria	Gammaproteobacteria	2.5086	36.5	-	MVDO01	282	2566	2303	2/24/17	2/27/17	Contig	Research Institute of Forest Ecology Environment and Protection	SAMN06274967	GCA_002006755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/755/GCA_002006755.1_ASM200675v1	-	kbl006
Wohlfahrtiimonas sp. G9077	1980118	PRJNA382997	382997	Proteobacteria	Gammaproteobacteria	2.10221	43.8	-	NEFD01	14	2006	1943	8/15/17	8/17/17	Contig	Centers for Disease Control and Prevention	SAMN06758453	GCA_002252155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/155/GCA_002252155.1_ASM225215v1	-	G9077
Acinetobacter celticus	1891224	PRJNA328585	328585	Proteobacteria	Gammaproteobacteria	3.0938	39.3	-	MBDL01	15	3010	2839	8/18/16	3/2/17	Contig	National Institute of Public Health	SAMN05375319	GCA_001707755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/755/GCA_001707755.1_ASM170775v1	-	ANC 4603
Endozoicomonas arenosclerae	1633495	PRJNA279233	279233	Proteobacteria	Gammaproteobacteria	6.45355	47.7	-	LASA01	328	5828	5430	2/16/16	3/15/17	Contig	UFRJ	SAMN03407264	GCA_001562015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/015/GCA_001562015.1_ASM156201v1	26786501	ab112
Bacillus halmapalus	79882	PRJNA350194	350194	Terrabacteria group	Firmicutes	4.70188	37.6	-	MTIT01	2	4644	4488	3/6/17	3/8/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN05934582	GCA_002019665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/665/GCA_002019665.1_ASM201966v1	-	DSM 8723
[Bacillus] clarkii	79879	PRJNA350196	350196	Terrabacteria group	Firmicutes	5.47639	42.1	-	MTIV01	7	5269	5035	3/6/17	3/9/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN05934584	GCA_002019695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/695/GCA_002019695.1_ASM201969v1	-	DSM 8720
Bacillus patagoniensis	228576	PRJNA350198	350198	Terrabacteria group	Firmicutes	4.64691	39.6	-	MTIX01	3	4809	4577	3/6/17	3/8/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN05934586	GCA_002019705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/705/GCA_002019705.1_ASM201970v1	-	DSM 16117
Klebsiella pneumoniae	573	PRJNA293620	293620	Proteobacteria	Gammaproteobacteria	5.31274	57.5	chromosome:NZ_CP012560.1/CP012560.1	-	1	5314	5051	9/8/16	2/21/17	Complete Genome	UCLA Medical Center	SAMN04008891	GCA_001721725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/725/GCA_001721725.1_ASM172172v1	-	UCLAOXA232KP_Pt0
Solemya elarraichensis gill symbiont	1918949	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.55275	55.6	-	MPRJ01	128	2531	2319	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016298	GCA_002020805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/805/GCA_002020805.1_ASM202080v1	-	-
Solemya velesiana gill symbiont	1918948	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	3.56344	54	-	MPRL01	161	3376	3215	3/6/17	3/9/17	Contig	Harvard University	SAMN06016300	GCA_002020875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/875/GCA_002020875.1_ASM202087v1	-	-
Solemya pervernicosa gill symbiont	642797	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.04761	50.8	-	MPRK01	378	2234	1916	3/6/17	3/9/17	Contig	Harvard University	SAMN06016299	GCA_002021095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/095/GCA_002021095.1_ASM202109v1	-	-
Paenibacillus selenitireducens	1324314	PRJNA359398	359398	Terrabacteria group	Firmicutes	6.89064	44.9	-	MSZX01	44	6451	6214	3/6/17	3/9/17	Contig	Huazhong Agricultural University	SAMN06191537	GCA_002021565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/565/GCA_002021565.1_ASM202156v1	-	ES3-24
Salipaludibacillus agaradhaerens	76935	PRJNA350195	350195	Terrabacteria group	Firmicutes	4.31944	38.9	-	MTIU01	1	3970	3816	3/6/17	9/18/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN05934583	GCA_002019735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/735/GCA_002019735.1_ASM201973v1	-	DSM 8721
Bacillus oshimensis	290588	PRJNA350197	350197	Terrabacteria group	Firmicutes	4.05838	39.9	-	MTIW01	1	4074	3941	3/6/17	3/8/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN05934585	GCA_002019765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/765/GCA_002019765.1_ASM201976v1	-	DSM 18940
Raoultella ornithinolytica	54291	PRJNA273324	273324	Proteobacteria	Gammaproteobacteria	5.52204	57.5	chromosome:NZ_CP010557.1/CP010557.1	-	1	5269	5018	1/29/15	4/3/17	Complete Genome	Nanjing Agricultural University	SAMN03290669	GCA_000829965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/965/GCA_000829965.1_ASM82996v1	-	S12
Cetobacterium ceti	180163	PRJEB19567	376370	Fusobacteria	Fusobacteriia	2.58091	28.3	-	FUWX01	61	2610	2454	3/4/17	3/10/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745174	GCA_900167275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/275/GCA_900167275.1_IMG-taxon_2585428148_annotated_assembly	-	ATCC 700028
Enterovibrio nigricans DSM 22720	1121868	PRJEB19574	376357	Proteobacteria	Gammaproteobacteria	5.03727	46.6	-	FUXU01	241	4783	4325	3/4/17	3/10/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745132	GCA_900167155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/155/GCA_900167155.1_IMG-taxon_2568526010_annotated_assembly	-	DSM 22720
Desulfovibrio bizertensis DSM 18034	1121442	PRJEB19581	376344	Proteobacteria	delta/epsilon subdivisions	3.26641	52.1	-	FUYA01	27	2967	2892	3/4/17	3/10/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745702	GCA_900167065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/065/GCA_900167065.1_IMG-taxon_2568526004_annotated_assembly	-	DSM 18034
Oceanospirillum multiglobuliferum	64969	PRJEB19549	376328	Proteobacteria	Gammaproteobacteria	3.51271	45.4	-	FUXG01	46	3198	3040	3/4/17	3/10/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745127	GCA_900167095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/095/GCA_900167095.1_IMG-taxon_2582581321_annotated_assembly	-	ATCC 33336
Gemmiger formicilis	745368	PRJEB19593	376338	Terrabacteria group	Firmicutes	3.24157	58.1	-	FUYF01	92	2935	2780	3/4/17	3/11/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745178	GCA_900167555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/555/GCA_900167555.1_IMG-taxon_2590828806_annotated_assembly	-	ATCC 27749
Eubacterium uniforme	39495	PRJEB19579	376362	Terrabacteria group	Firmicutes	2.87234	32.2	-	FUXZ01	44	2454	2348	3/4/17	3/10/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745111	GCA_900167115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/115/GCA_900167115.1_IMG-taxon_2585428145_annotated_assembly	-	ATCC 35992
Caloramator quimbayensis	1147123	PRJEB19590	376342	Terrabacteria group	Firmicutes	3.13136	32.3	-	FUYH01	67	3040	2878	3/4/17	3/10/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05443428	GCA_900167605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/605/GCA_900167605.1_IMG-taxon_2671180028_annotated_assembly	-	USBA 833
Anaerorhabdus furcosa	118967	PRJEB19544	376323	FCB group	Bacteroidetes/Chlorobi group	2.40695	32.1	-	FUWY01	11	2403	2326	3/4/17	3/10/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02745191	GCA_900167375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/375/GCA_900167375.1_IMG-taxon_2588254259_annotated_assembly	-	ATCC 25662
Porphyromonas circumdentaria	29524	PRJEB19548	376327	FCB group	Bacteroidetes/Chlorobi group	2.03379	43.1	-	FUXE01	35	1755	1642	3/4/17	3/10/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745171	GCA_900167105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/105/GCA_900167105.1_IMG-taxon_2582581320_annotated_assembly	-	ATCC 51356
Coriobacteriaceae bacterium KH1P3	1945884	PRJEB19561	376364	Terrabacteria group	Actinobacteria	2.02862	63.1	-	FUWQ01	15	1715	1613	3/4/17	3/10/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06298223	GCA_900167315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/315/GCA_900167315.1_IMG-taxon_2608642217_annotated_assembly	-	KH1P3
Carboxydocella sporoproducens DSM 16521	1121270	PRJEB19571	376354	Terrabacteria group	Firmicutes	2.57892	49.1	-	FUXM01	83	2718	2558	3/4/17	3/10/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02745885	GCA_900167165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/165/GCA_900167165.1_IMG-taxon_2568526009_annotated_assembly	-	DSM 16521
Chitinophaga eiseniae	634771	PRJEB19538	376332	FCB group	Bacteroidetes/Chlorobi group	8.55264	50.4	-	FUWZ01	30	6887	6707	3/4/17	3/10/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488128	GCA_900167135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/135/GCA_900167135.1_IMG-taxon_2634166306_annotated_assembly	-	DSM 22224
Lysobacter spongiicola DSM 21749	1122188	PRJEB19566	376369	Proteobacteria	Gammaproteobacteria	3.09967	67.6	-	FUXP01	31	2904	2777	3/4/17	3/10/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02745674	GCA_900167055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/055/GCA_900167055.1_IMG-taxon_2568526003_annotated_assembly	-	DSM 21749
Fibrobacter intestinalis	28122	PRJEB19553	376312	FCB group	Fibrobacteres	3.29237	47.8	-	FUWU01	116	3022	2802	3/4/17	3/11/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745108	GCA_900167415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/415/GCA_900167415.1_IMG-taxon_2582581325_annotated_assembly	-	ATCC 43854
Sediminibacterium ginsengisoli	413434	PRJEB19537	376331	FCB group	Bacteroidetes/Chlorobi group	4.08998	46.3	-	FUWH01	22	3602	3517	3/4/17	3/11/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488132	GCA_900167075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/075/GCA_900167075.1_IMG-taxon_2634166300_annotated_assembly	-	DSM 22335
Geobacter thiogenes	115783	PRJEB19560	376363	Proteobacteria	delta/epsilon subdivisions	3.57125	52.8	-	FUWR01	42	3333	3189	3/4/17	3/11/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745119	GCA_900167465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/465/GCA_900167465.1_IMG-taxon_2585428117_annotated_assembly	-	ATCC BAA-34
Thiothrix eikelboomii	92487	PRJEB19580	376343	Proteobacteria	Gammaproteobacteria	4.15873	46.4	-	FUYB01	50	3992	3820	3/4/17	3/11/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745130	GCA_900167255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/255/GCA_900167255.1_IMG-taxon_2585428147_annotated_assembly	-	ATCC 49788
Pilibacter termitis	263852	PRJEB19562	376365	Terrabacteria group	Firmicutes	2.79424	38	-	FUXI01	59	2606	2512	3/4/17	3/11/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745116	GCA_900167335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/335/GCA_900167335.1_IMG-taxon_2585428141_annotated_assembly	-	ATCC BAA-1030
Desulfovibrio gracilis DSM 16080	1121449	PRJEB19582	376345	Proteobacteria	delta/epsilon subdivisions	3.17948	58.4	-	FUYC01	53	2930	2845	3/4/17	3/10/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02745704	GCA_900167125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/125/GCA_900167125.1_IMG-taxon_2568526008_annotated_assembly	-	DSM 16080
Eubacterium coprostanoligenes	290054	PRJEB19558	376317	Terrabacteria group	Firmicutes	1.82343	40.1	-	FUWW01	36	1699	1606	3/4/17	3/11/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02745114	GCA_900167205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/205/GCA_900167205.1_IMG-taxon_2585428093_annotated_assembly	-	ATCC 51222
Mycoplasma verecundum	171291	PRJEB19550	376309	Terrabacteria group	Tenericutes	0.872997	26.9	-	FUXF01	50	714	625	3/4/17	3/11/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02745154	GCA_900167035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/035/GCA_900167035.1_IMG-taxon_2582581322_annotated_assembly	-	ATCC 27862
Aeromicrobium choanae	1736691	PRJEB19586	376349	Terrabacteria group	Actinobacteria	3.42203	71	chromosome I:NZ_LT796768.1/LT796768.1	-	1	3328	3247	3/4/17	3/10/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN06295964	GCA_900167475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/475/GCA_900167475.1_IMG-taxon_2708742384_annotated_assembly	-	9H-4
Selenihalanaerobacter shriftii	142842	PRJEB19551	376310	Terrabacteria group	Firmicutes	2.84058	31.6	-	FUWM01	54	2787	2635	3/4/17	3/11/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745118	GCA_900167185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/185/GCA_900167185.1_IMG-taxon_2582581323_annotated_assembly	-	ATCC BAA-73
Prosthecobacter debontii	48467	PRJEB19594	376339	PVC group	Verrucomicrobia	6.29236	56.5	-	FUYE01	56	5099	4918	3/4/17	3/11/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745166	GCA_900167535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/535/GCA_900167535.1_IMG-taxon_2590828807_annotated_assembly	-	ATCC 700200
Treponema berlinense	225004	PRJEB19547	376326	Spirochaetes	Spirochaetia	2.52103	39.4	-	FUXC01	33	2247	2141	3/4/17	3/11/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745152	GCA_900167025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/025/GCA_900167025.1_IMG-taxon_2582581319_annotated_assembly	-	ATCC BAA-909
Treponema porcinum	261392	PRJEB19554	376313	Spirochaetes	Spirochaetia	2.50781	42.5	-	FUWG01	32	2275	2161	3/4/17	3/11/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745149	GCA_900167145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/145/GCA_900167145.1_IMG-taxon_2582581326_annotated_assembly	-	ATCC BAA-908
Plantibacter flavus	150123	PRJNA361268	361268	Terrabacteria group	Actinobacteria	4.21168	69.2	chromosome:NZ_CP019402.1/CP019402.1	-	1	3900	3789	3/9/17	3/11/17	Chromosome	University of Toronto-Scarborough	SAMN06229853	GCA_002024505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/505/GCA_002024505.1_ASM202450v1	-	251
Klebsiella pneumoniae HK787	1392500	PRJNA217289	217289	Proteobacteria	Gammaproteobacteria	5.32939	57.5	chromosome:NZ_CP006738.1/CP006738.1	-	1	5250	5027	1/2/15	2/21/17	Complete Genome	National Health Research Institutes	SAMN03274239	GCA_000813205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/205/GCA_000813205.1_ASM81320v1	-	HK787
Synechococcus sp. KORDI-100	1280380	PRJNA207982	207982	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.789	57.5	chromosome:NZ_CP006269.1/CP006269.1	-	1	2920	2822	8/4/14	4/9/17	Complete Genome	Korea Institute of Ocean Science and Technology	SAMN02202183	GCA_000737535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/535/GCA_000737535.1_ASM73753v1	-	KORDI-100
Bacillus intestinalis	1963032	PRJNA376786	376786	Terrabacteria group	Firmicutes	4.04728	43.9	-	MWZB01	164	4078	3913	3/14/17	3/16/17	Contig	Human Microbiology Institute	SAMN06446695	GCA_002027305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/305/GCA_002027305.1_ASM202730v1	-	1731
Moraxella equi	60442	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.70181	44.2	-	MXAP01	200	2624	2447	3/14/17	3/16/17	Scaffold	TAILORED-Treatment project	SAMN06556573	GCA_002027555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/555/GCA_002027555.1_ASM202755v1	-	CCUG 4950
Paenibacillus ferrarius	1469647	PRJNA331076	331076	Terrabacteria group	Firmicutes	9.18434	45.6	-	MBTG01	73	8260	7970	3/15/17	3/17/17	Scaffold	Huzhong Agricultrural University	SAMN05437217	GCA_002027705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/705/GCA_002027705.1_ASM202770v1	-	CY1
Zoogloea sp. LCSB751	1965277	PRJNA230567	230567	Proteobacteria	Betaproteobacteria	5.81021	64.2	-	MWUM01	734	5171	4994	3/15/17	6/20/17	Contig	Luxembourg Centre for Systems Biomedicine	SAMN06480675	GCA_002028455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/455/GCA_002028455.1_ASM202845v1	-	LCSB751
Nitrobacter vulgaris	29421	PRJNA377158	377158	Proteobacteria	Alphaproteobacteria	3.90057	59.8	-	MWPQ01	95	3742	3476	3/15/17	6/12/17	Scaffold	Oregon State University	SAMN06458300	GCA_002028545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/545/GCA_002028545.1_ASM202854v1	28473388	Ab1
Clostridium oryzae	1450648	PRJNA376692	376692	Terrabacteria group	Firmicutes	5.0748	33.1	-	MZGV01	176	4570	4359	3/15/17	3/17/17	Contig	Georg-August-University Goettingen	SAMN06461355	GCA_002029235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/235/GCA_002029235.1_ASM202923v1	-	DSM 28571
Clostridium chromiireducens	225345	PRJNA376690	376690	Terrabacteria group	Firmicutes	5.44771	30.1	-	MZGT01	188	4846	4603	3/15/17	3/17/17	Contig	Georg-August-University Goettingen	SAMN06461354	GCA_002029255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/255/GCA_002029255.1_ASM202925v1	-	DSM 23318
[Clostridium] thermoalcaliphilum	29349	PRJNA376695	376695	Terrabacteria group	Firmicutes	2.02549	31	-	MZGW01	40	2057	1983	3/15/17	3/17/17	Contig	Georg-August-University Goettingen	SAMN06461356	GCA_002029295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/295/GCA_002029295.1_ASM202929v1	-	DSM 7309
Salegentibacter salinarum	447422	PRJEB19701	377503	FCB group	Bacteroidetes/Chlorobi group	4.31003	37.2	-	FUZC01	41	3757	3612	3/8/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660903	GCA_900168115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/115/GCA_900168115.1_IMG-taxon_2595698206_annotated_assembly	-	DSM 23400
Acetoanaerobium noterae	745369	PRJEB19702	377504	Terrabacteria group	Firmicutes	2.81423	33.4	-	FUYN01	19	2726	2663	3/8/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745120	GCA_900168025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/025/GCA_900168025.1_IMG-taxon_2588253727_annotated_assembly	-	ATCC 35199
Dyadobacter psychrophilus	651661	PRJEB19711	377492	FCB group	Bacteroidetes/Chlorobi group	6.73693	45.1	-	FUZA01	32	5704	5577	3/8/17	4/10/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660293	GCA_900167945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/945/GCA_900167945.1_IMG-taxon_2595698219_annotated_assembly	-	DSM 22270
Sphingopyxis flava	1507287	PRJEB19699	377487	Proteobacteria	Alphaproteobacteria	4.1553	63.8	-	FUYP01	119	4146	3950	3/8/17	3/18/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06295937	GCA_900168005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/005/GCA_900168005.1_IMG-taxon_2706795030_annotated_assembly	-	R11H
Maribacter arcticus	561365	PRJEB19703	377505	FCB group	Bacteroidetes/Chlorobi group	4.21115	35	-	FUYL01	22	3716	3610	3/8/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660866	GCA_900167935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/935/GCA_900167935.1_IMG-taxon_2595698209_annotated_assembly	-	DSM 23546
Parapedobacter luteus	623280	PRJEB19700	377502	FCB group	Bacteroidetes/Chlorobi group	4.82992	49.3	-	FUYS01	28	4093	3971	3/8/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660226	GCA_900168055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/055/GCA_900168055.1_IMG-taxon_2595698205_annotated_assembly	-	DSM 22899
Lachnospiraceae bacterium	1898203	PRJEB19693	377481	Terrabacteria group	Firmicutes	3.7903	43.5	-	FUZG01	28	3351	3213	3/8/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06296386	GCA_900168235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/235/GCA_900168235.1_IMG-taxon_2606217738_annotated_assembly	-	KH1P17
Chryseobacterium balustinum	246	PRJEB19717	377488	FCB group	Bacteroidetes/Chlorobi group	4.85781	33.6	-	FUZE01	72	4486	4338	3/8/17	3/18/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421800	GCA_900168205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/205/GCA_900168205.1_IMG-taxon_2681813564_annotated_assembly	-	DSM 16775
Parabacteroides chartae	1037355	PRJEB19712	377493	FCB group	Bacteroidetes/Chlorobi group	3.91579	41.7	-	FUYQ01	44	3213	3083	3/8/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660349	GCA_900168155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/155/GCA_900168155.1_IMG-taxon_2595698220_annotated_assembly	-	DSM 24967
Soonwooa buanensis	619805	PRJEB19713	377494	FCB group	Bacteroidetes/Chlorobi group	3.32978	34.8	-	FUYZ01	30	3079	2997	3/8/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660477	GCA_900167905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/905/GCA_900167905.1_IMG-taxon_2595698221_annotated_assembly	-	DSM 22323
Pedobacter luteus	572036	PRJEB19723	377516	FCB group	Bacteroidetes/Chlorobi group	4.02864	42.3	-	FUYR01	10	3614	3521	3/8/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05661099	GCA_900168015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/015/GCA_900168015.1_IMG-taxon_2595698248_annotated_assembly	-	DSM 22385
Ohtaekwangia koreensis	688867	PRJEB19715	377496	FCB group	Bacteroidetes/Chlorobi group	7.24127	41.9	-	FUZU01	6	5852	5752	3/9/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660236	GCA_900167975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/975/GCA_900167975.1_IMG-taxon_2595698225_annotated_assembly	-	DSM 25262
Pseudoxanthomonas indica	428993	PRJEB19587	376350	Proteobacteria	Gammaproteobacteria	3.96092	65.4	-	FUZV01	3	3652	3541	3/9/17	3/18/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06296058	GCA_900167565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/565/GCA_900167565.1_IMG-taxon_2708742389_annotated_assembly	-	P15
Bacteroidales bacterium WCE2004	1945890	PRJEB19695	377483	FCB group	Bacteroidetes/Chlorobi group	2.32285	61.5	-	FUZR01	5	1974	1911	3/9/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06298214	GCA_900167895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/895/GCA_900167895.1_IMG-taxon_2623620625_annotated_assembly	-	WCE2004
Okibacterium fritillariae	123320	PRJEB19588	376351	Terrabacteria group	Actinobacteria	3.13823	67.8	-	FUZP01	4	2839	2760	3/9/17	3/18/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06309945	GCA_900167575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/575/GCA_900167575.1_IMG-taxon_2708742390_annotated_assembly	-	VKM Ac-2059
Plantibacter cousiniae	199709	PRJEB19585	376348	Terrabacteria group	Actinobacteria	4.0233	69.5	-	FUZO01	5	3749	3667	3/9/17	3/18/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06295973	GCA_900167175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/175/GCA_900167175.1_IMG-taxon_2708742383_annotated_assembly	-	VKM Ac-1787
Bacteroidales bacterium WCE2008	1945891	PRJEB19694	377482	FCB group	Bacteroidetes/Chlorobi group	2.37496	51.1	-	FUZM01	8	1960	1902	3/9/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06298215	GCA_900167925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/925/GCA_900167925.1_IMG-taxon_2623620621_annotated_assembly	-	WCE2008
Krasilnikoviella flava	526729	PRJEB19595	376340	Terrabacteria group	Actinobacteria	4.84602	73.7	-	FUZQ01	10	4417	4285	3/9/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04324258	GCA_900167525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/525/GCA_900167525.1_IMG-taxon_2596583702_annotated_assembly	-	DSM 21481
Bacillus jeotgali	129985	PRJEB19410	374692	Terrabacteria group	Firmicutes	4.62652	42.1	-	FVZC01	9	4580	4426	3/10/17	3/18/17	Contig	URMITE	SAMEA87823918	GCA_900166585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/585/GCA_900166585.1_PRJEB19410	-	Marseille-P1092
Halobacillus salinus	192814	PRJEB19408	374698	Terrabacteria group	Firmicutes	3.76672	44.3	-	FVYZ01	4	3956	3821	3/10/17	3/18/17	Contig	URMITE	SAMEA87354418	GCA_900166575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/575/GCA_900166575.1_PRJEB19408	-	Marseille-P2480
Halobacillus hunanensis	578214	PRJEB19434	374832	Terrabacteria group	Firmicutes	3.98185	41.3	-	FVZB01	7	4024	3869	3/10/17	3/18/17	Contig	URMITE	SAMEA89878168	GCA_900166655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/655/GCA_900166655.1_PRJEB19434	-	Marseille-P3457
Paraliobacillus ryukyuensis	200904	PRJEB19809	377949	Terrabacteria group	Firmicutes	3.44475	35.9	-	FVZO01	17	3553	3434	3/11/17	3/18/17	Contig	URMITE	SAMEA103520668	GCA_900168775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/775/GCA_900168775.1_PRJEB19809	-	Marseille-P3391
Novosphingobium mathurense	428990	PRJEB19758	377511	Proteobacteria	Alphaproteobacteria	4.84355	63.3	-	FVZE01	37	4539	4408	3/11/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06295987	GCA_900168325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/325/GCA_900168325.1_IMG-taxon_2706795032_annotated_assembly	-	SM117
Sideroxydans lithotrophicus ES-1	580332	PRJNA33161	33161	Proteobacteria	Betaproteobacteria	3.00366	57.5	chromosome:NC_013959.1/CP001965.1	-	1	3008	2929	3/26/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598496	GCA_000025705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/705/GCA_000025705.1_ASM2570v1	-	ES-1
Candidatus Entotheonella palauensis	93172	PRJEB12598	319513	Nitrospinae/Tectomicrobia group	Candidatus Tectomicrobia	7.89818	56.3	-	FKIP01	1378	7786	6974	4/23/16	8/3/17	Contig	GeneWiz	SAMEA3913525	GCA_900079095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/095/GCA_900079095.1_E.gemina.ts	-	-
[Pseudomonas] cissicola	86186	PRJNA298603	298603	Proteobacteria	Gammaproteobacteria	5.2541	64.5	-	LOJT01	313	4863	4301	3/6/17	3/9/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN04145196	GCA_002019225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/225/GCA_002019225.1_ASM201922v1	-	LMG21719
Bacillus abyssalis	1221450	PRJNA350189	350189	Terrabacteria group	Firmicutes	5.7739	40.3	-	MTIQ01	6	5573	5230	3/6/17	3/8/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN05934486	GCA_002019595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/595/GCA_002019595.1_ASM201959v1	-	DSM 25875
Bacillus alkalinitrilicus	427920	PRJNA350188	350188	Terrabacteria group	Firmicutes	5.52357	36.9	-	MTIP01	2	5355	4945	3/6/17	3/8/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN05934485	GCA_002019605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/605/GCA_002019605.1_ASM201960v1	-	DSM 22532
Bacillus halosaccharovorans	930124	PRJNA350191	350191	Terrabacteria group	Firmicutes	5.39937	36.1	-	MTIR01	4	5133	4941	3/6/17	3/8/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN05934487	GCA_002019635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/635/GCA_002019635.1_ASM201963v1	-	DSM 25387
Bacillus alkalitelluris	304268	PRJNA350193	350193	Terrabacteria group	Firmicutes	5.42704	36.4	-	MTIS01	2	5030	4719	3/6/17	3/9/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN05934581	GCA_002019645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/645/GCA_002019645.1_ASM201964v1	-	DSM 16976
Sphingobacterium nematocida	1513896	PRJEB19704	377506	FCB group	Bacteroidetes/Chlorobi group	5.05026	39.9	-	FUZF01	44	4305	4160	3/8/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660841	GCA_900168125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/125/GCA_900168125.1_IMG-taxon_2595698210_annotated_assembly	-	DSM 24091
Arcobacter marinus	505249	PRJEB19698	377486	Proteobacteria	delta/epsilon subdivisions	2.81879	27.1	-	FUYO01	69	2768	2663	3/8/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06295997	GCA_900168035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/035/GCA_900168035.1_IMG-taxon_2703719342_annotated_assembly	-	SH-4D_Col1
Sphingomonas histidinilytica	439228	PRJEB19696	377484	Proteobacteria	Alphaproteobacteria	5.47334	67.4	-	FUYM01	59	5221	5103	3/8/17	3/18/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06295920	GCA_900167915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/915/GCA_900167915.1_IMG-taxon_2706795026_annotated_assembly	-	UM2
Salegentibacter holothuriorum	241145	PRJEB19721	377514	FCB group	Bacteroidetes/Chlorobi group	3.59199	36.4	-	FUYY01	18	3153	3075	3/8/17	3/18/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05660776	GCA_900168045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/045/GCA_900168045.1_IMG-taxon_2595698246_annotated_assembly	-	DSM 23405
Pirellula staleyi DSM 6068	530564	PRJNA29845	29845	PVC group	Planctomycetes	6.1962	57.5	chromosome:NC_013720.1/CP001848.1	-	1	4686	4597	1/7/10	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00120219	GCA_000025185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/185/GCA_000025185.1_ASM2518v1	21304671	DSM 6068
Corynebacterium kroppenstedtii DSM 44385	645127	PRJNA38011	38011	Terrabacteria group	Actinobacteria	2.4468	57.5	chromosome:NC_012704.1/CP001620.1	-	1	2088	1999	5/19/09	4/6/17	Complete Genome	"Bielefeld University, Center for Biotechnology"	SAMN02603033	GCA_000023145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/145/GCA_000023145.1_ASM2314v1	18430482	DSM 44385
Salegentibacter salegens	143223	PRJEB18407	355842	FCB group	Bacteroidetes/Chlorobi group	4.0101	37.2	chromosome I:NZ_LT670848.1/LT670848.1	-	1	3559	3445	12/2/16	3/18/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05878281	GCA_900142975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/975/GCA_900142975.1_IMG-taxon_2698536943_annotated_assembly	-	ACAM 48
delta proteobacterium ML8_D	1775672	PRJNA305637	305637	Proteobacteria	delta/epsilon subdivisions	3.52724	45.1	-	LQBF01	93	3298	3128	3/16/17	3/16/17	Scaffold	University of Cincinnati	SAMN04330442	GCA_002029965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/965/GCA_002029965.1_ASM202996v1	-	-
delta proteobacterium ML8_F1	1775671	PRJNA305637	305637	Proteobacteria	delta/epsilon subdivisions	2.37637	50.2	-	LQBE01	58	2282	2156	3/16/17	3/16/17	Scaffold	University of Cincinnati	SAMN04330440	GCA_002029975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/975/GCA_002029975.1_ASM202997v1	-	-
Firmicutes bacterium ML8_F2	1775675	PRJNA305637	305637	Terrabacteria group	Firmicutes	3.01942	46.6	-	LQBG01	143	2930	2719	3/16/17	3/16/17	Scaffold	University of Cincinnati	SAMN04330448	GCA_002030005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/005/GCA_002030005.1_ASM203000v1	-	-
delta proteobacterium MLS_D	1775673	PRJNA305637	305637	Proteobacteria	delta/epsilon subdivisions	2.51237	55.2	-	LQBH01	70	2361	2231	3/16/17	3/16/17	Scaffold	University of Cincinnati	SAMN04330450	GCA_002030015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/015/GCA_002030015.1_ASM203001v1	-	-
Candidatus Aegiribacteria bacterium MLS_C	1775674	PRJNA305637	305637	FCB group	Candidatus Aegiribacteria	2.97874	59.6	-	LQBI01	35	2675	2577	3/16/17	3/16/17	Scaffold	University of Cincinnati	SAMN04330451	GCA_002030045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/045/GCA_002030045.1_ASM203004v1	-	-
Thermocrinis minervae	381751	PRJEB18353	355811	Aquificae	Aquificae	1.36792	44.5	chromosome I:NZ_LT670846.1/LT670846.1	-	1	1523	1460	12/2/16	3/18/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05444391	GCA_900142435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/435/GCA_900142435.1_IMG-taxon_2698536703_annotated_assembly	-	DSM 19557
Halomonas subglaciescola	29571	PRJEB18399	355735	Proteobacteria	Gammaproteobacteria	3.1102	60.8	chromosome I:NZ_LT670847.1/LT670847.1	-	1	2900	2740	12/2/16	3/18/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05878437	GCA_900142895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/895/GCA_900142895.1_IMG-taxon_2698536942_annotated_assembly	-	ACAM 12
Carboxydocella sp. ULO1	1926599	PRJDB5365	377280	Terrabacteria group	Firmicutes	2.70037	48.8	-	BDLQ01	180	2795	2620	2/28/17	3/22/17	Scaffold	"Laboratory of Marine Microbiology, Graduate School of Agriculture, Kyoto University"	SAMD00068889	GCA_002049255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/255/GCA_002049255.1_ASM204925v1	-	ULO1
Epsilonproteobacteria bacterium tcs-49	1742865	PRJNA270573	270573	Proteobacteria	delta/epsilon subdivisions	2.22131	49.8	-	LLYS01	17	-	-	3/20/17	3/20/17	Contig	Hong Kong University of Science and Technology	SAMN03267309	GCA_002049495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/495/GCA_002049495.1_ASM204949v1	-	-
Deltaproteobacteria bacterium tcs-42	1742866	PRJNA270573	270573	Proteobacteria	delta/epsilon subdivisions	2.55098	48.3	-	LLYT01	121	-	-	3/20/17	3/20/17	Contig	Hong Kong University of Science and Technology	SAMN03267311	GCA_002049545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/545/GCA_002049545.1_ASM204954v1	-	-
Oleispira sp. tcs-14	1742861	PRJNA270573	270573	Proteobacteria	Gammaproteobacteria	2.44804	42.4	-	LLYV01	677	-	-	3/20/17	3/20/17	Contig	Hong Kong University of Science and Technology	SAMN04195696	GCA_002049565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/565/GCA_002049565.1_ASM204956v1	-	-
candidate division WOR-3 bacterium 4484_100	1936077	PRJNA362212	362212	unclassified Bacteria	Bacteria candidate phyla	1.33066	43.1	-	MUKB01	136	1371	1298	3/20/17	3/20/17	Contig	The University of Texas at Austin	SAMN06236442	GCA_002049785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/785/GCA_002049785.1_ASM204978v1	-	-
candidate division KSB1 bacterium 4484_188	1956175	PRJNA362212	362212	unclassified Bacteria	Bacteria candidate phyla	1.73681	46.2	-	MVCZ01	213	1837	1689	3/20/17	3/20/17	Scaffold	The University of Texas at Austin	SAMN06288170	GCA_002049825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/825/GCA_002049825.1_ASM204982v1	-	-
Gemmatimonadaceae bacterium 4484_173	1956166	PRJNA362212	362212	FCB group	Gemmatimonadetes	1.66994	48.8	-	MVCX01	170	1709	1654	3/20/17	3/20/17	Contig	The University of Texas at Austin	SAMN06288092	GCA_002049845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/845/GCA_002049845.1_ASM204984v1	-	-
Planctomycetales bacterium 4484_123	1956162	PRJNA362212	362212	PVC group	Planctomycetes	1.45981	68.3	-	MVCS01	170	1370	1305	3/20/17	3/20/17	Scaffold	The University of Texas at Austin	SAMN06287959	GCA_002049885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/885/GCA_002049885.1_ASM204988v1	-	-
Candidatus Omnitrophica bacterium 4484_171	1956173	PRJNA362212	362212	PVC group	Candidatus Omnitrophica	1.26784	39.1	-	MVCW01	108	1349	1285	3/20/17	3/20/17	Scaffold	The University of Texas at Austin	SAMN06288075	GCA_002049895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/895/GCA_002049895.1_ASM204989v1	-	-
Desulfobacteraceae bacterium 4484_190.1	1956167	PRJNA362212	362212	Proteobacteria	delta/epsilon subdivisions	2.95186	44.3	-	MVDA01	363	2730	2567	3/20/17	3/20/17	Scaffold	The University of Texas at Austin	SAMN06288222	GCA_002049905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/905/GCA_002049905.1_ASM204990v1	-	-
Campylobacteraceae bacterium 4484_166	1956165	PRJNA362212	362212	Proteobacteria	delta/epsilon subdivisions	0.910875	32.4	-	MVCV01	38	1016	957	3/20/17	3/20/17	Scaffold	The University of Texas at Austin	SAMN06288068	GCA_002049955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/955/GCA_002049955.1_ASM204995v1	-	-
Candidatus Latescibacteria bacterium 4484_181	1956174	PRJNA362212	362212	FCB group	Candidatus Latescibacteria	0.995193	49.9	-	MVCY01	102	1049	964	3/20/17	3/20/17	Scaffold	The University of Texas at Austin	SAMN06288098	GCA_002049985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/985/GCA_002049985.1_ASM204998v1	-	-
Desulfobacteraceae bacterium 4484_190.3	1956169	PRJNA362212	362212	Proteobacteria	delta/epsilon subdivisions	2.91574	48.1	-	MVDC01	327	3017	2712	3/20/17	3/20/17	Scaffold	The University of Texas at Austin	SAMN06288224	GCA_002050005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/005/GCA_002050005.1_ASM205000v1	-	-
Desulfobacteraceae bacterium 4484_190.2	1956168	PRJNA362212	362212	Proteobacteria	delta/epsilon subdivisions	2.37275	45.8	-	MVDB01	232	2315	2173	3/20/17	3/20/17	Contig	The University of Texas at Austin	SAMN06288223	GCA_002050025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/025/GCA_002050025.1_ASM205002v1	-	-
Planctomycetales bacterium 4484_113	1956161	PRJNA362212	362212	PVC group	Planctomycetes	1.54393	59	-	MVCR01	122	1514	1448	3/20/17	3/20/17	Scaffold	The University of Texas at Austin	SAMN06287783	GCA_002050035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/035/GCA_002050035.1_ASM205003v1	-	-
Microgenomates bacterium UTCPR1	1961107	PRJNA343219	343219	unclassified Bacteria	Bacteria candidate phyla	0.892243	37.7	-	MWSR01	91	996	950	3/20/17	4/11/17	Contig	University of Wisconsin - Madison	SAMN06342775	GCA_002050095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/095/GCA_002050095.1_ASM205009v1	-	-
Chloroflexi bacterium UTCFX4	1961111	PRJNA343219	343219	Terrabacteria group	Chloroflexi	4.65427	54.8	-	MWSY01	672	4555	4447	3/20/17	4/11/17	Scaffold	University of Wisconsin - Madison	SAMN06342768	GCA_002050085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/085/GCA_002050085.1_ASM205008v1	-	-
Anaerolineae bacterium UTCFX2	1961101	PRJNA343219	343219	Terrabacteria group	Chloroflexi	2.92476	56.9	-	MWTA01	111	2646	2581	3/20/17	4/11/17	Scaffold	University of Wisconsin - Madison	SAMN06342766	GCA_002050125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/125/GCA_002050125.1_ASM205012v1	-	-
Ignavibacteriales bacterium UTCHB1	1961104	PRJNA343219	343219	FCB group	Bacteroidetes/Chlorobi group	2.4246	37.6	-	MWSW01	19	2137	2079	3/20/17	4/11/17	Scaffold	University of Wisconsin - Madison	SAMN06342770	GCA_002050165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/165/GCA_002050165.1_ASM205016v1	-	-
Ignavibacteriales bacterium UTCHB3	1961106	PRJNA343219	343219	FCB group	Bacteroidetes/Chlorobi group	2.94379	42.1	-	MWSU01	349	2527	2473	3/20/17	4/11/17	Contig	University of Wisconsin - Madison	SAMN06342772	GCA_002050155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/155/GCA_002050155.1_ASM205015v1	-	-
Anaerolineae bacterium UTCFX3	1961102	PRJNA343219	343219	Terrabacteria group	Chloroflexi	2.65595	61.1	-	MWSZ01	281	2716	2582	3/20/17	4/11/17	Scaffold	University of Wisconsin - Madison	SAMN06342767	GCA_002050195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/195/GCA_002050195.1_ASM205019v1	-	-
Planctomycetes bacterium UTPLA1	1961112	PRJNA343219	343219	PVC group	Planctomycetes	4.43593	60.8	-	MWTD01	642	3996	3911	3/20/17	4/11/17	Scaffold	University of Wisconsin - Madison	SAMN06342763	GCA_002050205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/205/GCA_002050205.1_ASM205020v1	-	-
Polyangiaceae bacterium UTPRO1	1961108	PRJNA343219	343219	Proteobacteria	delta/epsilon subdivisions	3.81802	69.8	-	MWST01	45	3312	3240	3/20/17	4/11/17	Contig	University of Wisconsin - Madison	SAMN06342773	GCA_002050235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/235/GCA_002050235.1_ASM205023v1	-	-
Anaerolineae bacterium UTCFX5	1961103	PRJNA343219	343219	Terrabacteria group	Chloroflexi	3.77697	62.8	-	MWSX01	364	3416	3332	3/20/17	4/11/17	Scaffold	University of Wisconsin - Madison	SAMN06342769	GCA_002050245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/245/GCA_002050245.1_ASM205024v1	-	-
Anaerolineae bacterium UTCFX1	1961100	PRJNA343219	343219	Terrabacteria group	Chloroflexi	2.77752	52.6	-	MWTB01	34	2614	2550	3/20/17	4/11/17	Scaffold	University of Wisconsin - Madison	SAMN06342765	GCA_002050275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/275/GCA_002050275.1_ASM205027v1	-	-
Ignavibacteriales bacterium UTCHB2	1961105	PRJNA343219	343219	FCB group	Bacteroidetes/Chlorobi group	4.06243	33	-	MWSV01	225	3537	3456	3/20/17	4/11/17	Scaffold	University of Wisconsin - Madison	SAMN06342771	GCA_002050295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/295/GCA_002050295.1_ASM205029v1	-	-
Acidobacteria bacterium 28-9	1962176	PRJNA376086	376086	Acidobacteria	unclassified Acidobacteria	3.65258	45.7	-	MWYY01	117	-	-	3/20/17	3/20/17	Scaffold	"Centre for Microbial Ecology and Genomics, University of Pretoria,"	SAMN06350636	GCA_002050355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/355/GCA_002050355.1_ASM205035v1	-	-
Acidobacteria bacterium 28-1	1962177	PRJNA376086	376086	Acidobacteria	unclassified Acidobacteria	4.14911	45.4	-	MWYZ01	109	-	-	3/20/17	3/20/17	Contig	"Centre for Microbial Ecology and Genomics, University of Pretoria,"	SAMN06350640	GCA_002050365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/365/GCA_002050365.1_ASM205036v1	-	-
Chitinophagales bacterium 62-2	1962172	PRJNA376086	376086	FCB group	Bacteroidetes/Chlorobi group	4.90867	38.4	-	MWYU01	755	-	-	3/20/17	3/20/17	Scaffold	"Centre for Microbial Ecology and Genomics, University of Pretoria,"	SAMN06350510	GCA_002050375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/375/GCA_002050375.1_ASM205037v1	-	-
Chitinophagales bacterium 4-3	1962174	PRJNA376086	376086	FCB group	Bacteroidetes/Chlorobi group	1.7614	35.3	-	MWYW01	433	-	-	3/20/17	3/20/17	Contig	"Centre for Microbial Ecology and Genomics, University of Pretoria,"	SAMN06350556	GCA_002050415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/415/GCA_002050415.1_ASM205041v1	-	-
Chitinophagales bacterium 33-2	1962173	PRJNA376086	376086	FCB group	Bacteroidetes/Chlorobi group	3.01332	41.8	-	MWYV01	76	-	-	3/20/17	3/20/17	Contig	"Centre for Microbial Ecology and Genomics, University of Pretoria,"	SAMN06350542	GCA_002050435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/435/GCA_002050435.1_ASM205043v1	-	-
Acidobacteria bacterium 5-1	1962178	PRJNA376086	376086	Acidobacteria	unclassified Acidobacteria	3.21101	44.3	-	MWZA01	223	-	-	3/20/17	3/20/17	Scaffold	"Centre for Microbial Ecology and Genomics, University of Pretoria,"	SAMN06350653	GCA_002050455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/455/GCA_002050455.1_ASM205045v1	-	-
Chitinophagales bacterium 65-1	1962175	PRJNA376086	376086	FCB group	Bacteroidetes/Chlorobi group	1.95769	35.7	-	MWYX01	68	-	-	3/20/17	3/20/17	Scaffold	"Centre for Microbial Ecology and Genomics, University of Pretoria,"	SAMN06350595	GCA_002050465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/465/GCA_002050465.1_ASM205046v1	-	-
Tardiphaga robiniae	943830	PRJNA316801	316801	Proteobacteria	Alphaproteobacteria	6.36022	61.5	-	LVYV01	56	5947	5778	4/12/16	5/30/17	Contig	All-Russia Research Institute for Agricultural Microbiology	SAMN04590170	GCA_001618955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/955/GCA_001618955.1_ASM161895v1	26013968	Vaf-07
Clostridium thermobutyricum DSM 4928	1121339	PRJNA313157	313157	Terrabacteria group	Firmicutes	3.39793	26.4	-	LTAY01	111	3267	3082	3/21/17	3/23/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04516210	GCA_002050515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/515/GCA_002050515.1_ASM205051v1	-	DSM 4928
[Clostridium] hungatei	48256	PRJNA376698	376698	Terrabacteria group	Firmicutes	4.90105	42.3	-	MZGX01	100	4313	4131	3/21/17	3/23/17	Contig	Georg-August-University Goettingen	SAMN06461358	GCA_002051585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/585/GCA_002051585.1_ASM205158v1	-	DSM 14427
Agrobacterium vitis S4	311402	PRJNA13372	13372	Proteobacteria	Alphaproteobacteria	6.32095	57.4965	chromosome 1:NC_011989.1/CP000633.1; chromosome 2:NC_011988.1/CP000634.1; plasmid pAtS4a:NC_011986.1/CP000639.1; plasmid pAtS4b:NC_011991.1/CP000635.1; plasmid pAtS4c:NC_011984.1/CP000636.1; plasmid pAtS4e:NC_011981.1/CP000638.1; plasmid pTiS4:NC_011982.1/CP000637.1	-	7	5820	5588	1/27/09	5/18/17	Complete Genome	Agrobacterium consortium	SAMN02602976	GCA_000016285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/285/GCA_000016285.1_ASM1628v1	19251847	S4
Candidatus Latescibacteria bacterium 4484_107	1956171	PRJNA362212	362212	FCB group	Candidatus Latescibacteria	1.59696	55.5	-	MVCQ01	192	1568	1480	3/20/17	3/20/17	Scaffold	The University of Texas at Austin	SAMN06287578	GCA_002059205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/205/GCA_002059205.1_ASM205920v1	-	-
Rhodocyclaceae bacterium UTPRO2	1961109	PRJNA343219	343219	Proteobacteria	Betaproteobacteria	2.35591	66.7	-	MWSS01	380	2646	2456	3/20/17	4/11/17	Scaffold	University of Wisconsin - Madison	SAMN06342774	GCA_002066955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/955/GCA_002066955.1_ASM206695v1	-	-
Sphingobacteriales bacterium UTBCD1	1961110	PRJNA343219	343219	FCB group	Bacteroidetes/Chlorobi group	3.75736	41	-	MWTC01	58	3174	3101	3/20/17	4/11/17	Contig	University of Wisconsin - Madison	SAMN06342764	GCA_002066995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/995/GCA_002066995.1_ASM206699v1	-	-
Acetobacter persici	1076596	PRJNA311264	311264	Proteobacteria	Alphaproteobacteria	3.75668	57.4437	chromosome:NZ_CP014687.1/CP014687.1; plasmid pAC1084_1:NZ_CP014688.1/CP014688.1	-	2	3450	3032	2/24/17	2/27/17	Complete Genome	Technische Universitaet Muenchen	SAMN04396916	GCA_002006565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/565/GCA_002006565.1_ASM200656v1	-	TMW2.1084
Photobacterium piscicola	1378299	PRJEB19053	379565	Proteobacteria	Gammaproteobacteria	4.5253	39.2	-	FUZI01	65	4101	3878	3/17/17	3/24/17	Scaffold	UVEG	SAMEA93355168	GCA_900166965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/965/GCA_900166965.1_P.piscicola_NCCB100098T_SPAdes_Prokka_EMBL	-	type strain: NCCB 100098
Croceivirga radicis	1929488	PRJNA358143	358143	FCB group	Bacteroidetes/Chlorobi group	3.60264	37.1	-	MTBC01	20	3121	3059	3/23/17	9/4/17	Contig	The Third Institute of State Oceanic Administration	SAMN06174226	GCA_002072105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/105/GCA_002072105.2_ASM207210v2	-	HSG9
Celeribacter ethanolicus	1758178	PRJNA306246	306246	Proteobacteria	Alphaproteobacteria	4.2073	61.3	-	LRUC01	52	4145	3972	2/5/16	4/6/17	Scaffold	"Second Institute of Oceanography, State Oceanic Administration"	SAMN04432130	GCA_001550095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/550/095/GCA_001550095.1_ASM155009v1	-	NH195
Klebsiella pneumoniae 30684/NJST258_2	1420013	PRJNA226699	226699	Proteobacteria	Gammaproteobacteria	5.41722	57.4316	chromosome:NZ_CP006918.1/CP006918.1; plasmid p30684_1:NZ_CP006919.1/CP006919.1; plasmid p30684_2b:NZ_CP006922.1/CP006922.1; plasmid p30684_3:NZ_CP006921.1/CP006921.1	-	4	5473	5249	3/19/14	2/21/17	Complete Genome	Igenbio Inc	SAMN03081501	GCA_000597905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/905/GCA_000597905.1_ASM59790v1	24639510	30684/NJST258_2
Klebsiella pneumoniae	573	PRJNA279657	279657	Proteobacteria	Gammaproteobacteria	5.38797	57.4114	chromosome:NZ_CP015134.1/CP015134.1; plasmid p35657-1:NZ_CP015135.1/CP015135.1	-	2	5363	5116	1/5/17	2/22/17	Complete Genome	NHGRI	SAMN03455977	GCA_001936035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/035/GCA_001936035.1_ASM193603v1	-	ATCC 35657
Gilliamella intestini	1798183	PRJEB15028	336292	Proteobacteria	Gammaproteobacteria	2.52149	34.6	-	FMBA01	113	2466	2284	8/3/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487798	GCA_900094935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/935/GCA_900094935.1_IMG-taxon_2617270738_annotated_assembly	-	R-53144
Gilliamella bombicola	1798182	PRJEB15022	336298	Proteobacteria	Gammaproteobacteria	2.31966	35.9	-	FMAQ01	29	2185	2101	8/3/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487799	GCA_900094945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/945/GCA_900094945.1_IMG-taxon_2617270739_annotated_assembly	-	R-53248
Klebsiella pneumoniae	573	PRJNA397713	397713	Proteobacteria	Gammaproteobacteria	5.47586	57.4	chromosome:NZ_CP022997.1/CP022997.1	-	1	5543	5284	8/30/17	9/1/17	Complete Genome	Beijing Institute of Microbiology and Epidemiology	SAMN07484315	GCA_002278055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/055/GCA_002278055.1_ASM227805v1	-	721005
SAR324 cluster bacterium SAR324-CTD7A-2	1795555	PRJNA276313	276313	Proteobacteria	delta/epsilon subdivisions	0.979155	41.2	-	LSNN01	118	-	-	4/10/17	4/10/17	Contig	HKUST	SAMN04448863	GCA_002082285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/285/GCA_002082285.1_ASM208228v1	26953077	-
SAR324 cluster bacterium SAR324-CTD10	1795557	PRJNA276313	276313	Proteobacteria	delta/epsilon subdivisions	2.93322	42.4	-	LSNP01	188	-	-	4/10/17	4/10/17	Contig	HKUST	SAMN04448865	GCA_002082295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/295/GCA_002082295.1_ASM208229v1	26953077	-
SAR324 cluster bacterium SAR324-CTD7B	1795556	PRJNA276313	276313	Proteobacteria	delta/epsilon subdivisions	2.80413	42.3	-	LSNO01	148	-	-	4/10/17	4/10/17	Contig	HKUST	SAMN04448864	GCA_002082305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/305/GCA_002082305.1_ASM208230v1	26953077	-
SAR324 cluster bacterium SAR324-CTD7A-1	1795554	PRJNA276313	276313	Proteobacteria	delta/epsilon subdivisions	1.44243	42.9	-	LSNM01	164	-	-	4/10/17	4/10/17	Contig	HKUST	SAMN04448862	GCA_002082535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/535/GCA_002082535.1_ASM208253v1	26953077	-
Klebsiella pneumoniae	573	PRJNA388820	388820	Proteobacteria	Gammaproteobacteria	5.33298	57.4	chromosome:NZ_CP022023.1/CP022023.1	-	1	5321	5052	6/27/17	6/29/17	Complete Genome	Beijing Institute of Microbiology and Epidemiology	SAMN07187263	GCA_002209405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/405/GCA_002209405.1_ASM220940v1	-	19051
Proteobacteria bacterium SG_bin4	1827381	PRJNA315256	315256	Proteobacteria	unclassified Proteobacteria	2.82865	48	-	LWDH01	58	2640	2533	4/10/17	4/24/17	Scaffold	The University Hong Kong	SAMN04606791	GCA_002083395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/395/GCA_002083395.1_ASM208339v1	28390307	-
Proteobacteria bacterium SG_bin6	1827383	PRJNA315256	315256	Proteobacteria	unclassified Proteobacteria	3.06838	67.3	-	LWDJ01	51	2963	2842	4/10/17	4/24/17	Scaffold	The University Hong Kong	SAMN04606794	GCA_002083435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/435/GCA_002083435.1_ASM208343v1	28390307	-
Proteobacteria bacterium SG_bin8	1827387	PRJNA315256	315256	Proteobacteria	unclassified Proteobacteria	3.0255	61	-	LWDL01	33	2921	2802	4/10/17	4/24/17	Scaffold	The University Hong Kong	SAMN04606796	GCA_002083445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/445/GCA_002083445.1_ASM208344v1	28390307	-
Proteobacteria bacterium SG_bin5	1827382	PRJNA315256	315256	Proteobacteria	unclassified Proteobacteria	2.85966	67.6	-	LWDI01	111	2816	2594	4/10/17	4/24/17	Scaffold	The University Hong Kong	SAMN04606793	GCA_002083475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/475/GCA_002083475.1_ASM208347v1	28390307	-
Proteobacteria bacterium SG_bin7	1827384	PRJNA315256	315256	Proteobacteria	unclassified Proteobacteria	3.5156	41.9	-	LWDK01	63	3542	3431	4/10/17	4/24/17	Scaffold	The University Hong Kong	SAMN04606795	GCA_002083485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/485/GCA_002083485.1_ASM208348v1	28390307	-
Proteobacteria bacterium HN_bin10	1827386	PRJNA315256	315256	Proteobacteria	unclassified Proteobacteria	2.75363	64.4	-	LWDN01	100	2943	2747	4/10/17	4/24/17	Scaffold	The University Hong Kong	SAMN04606798	GCA_002083515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/515/GCA_002083515.1_ASM208351v1	28390307	-
Proteobacteria bacterium SG_bin9	1827385	PRJNA315256	315256	Proteobacteria	unclassified Proteobacteria	4.38062	63	-	LWDM01	80	4253	4039	4/10/17	4/24/17	Scaffold	The University Hong Kong	SAMN04606797	GCA_002083525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/525/GCA_002083525.1_ASM208352v1	28390307	-
Proteobacteria bacterium ST_bin16	1931235	PRJNA315256	315256	Proteobacteria	unclassified Proteobacteria	2.71512	49.2	-	MSXT01	99	2589	2485	4/10/17	4/24/17	Scaffold	The University Hong Kong	SAMN06189368	GCA_002083595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/595/GCA_002083595.1_ASM208359v1	28390307	-
Cyanobacteria/Melainabacteria group bacterium S15B-MN24 RAAC_196	1919280	PRJNA348151	348151	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.32895	59.3	-	DAZX01	270	-	-	4/10/17	4/10/17	Scaffold	University of Queensland	SAMN05981170	GCA_002083785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/785/GCA_002083785.1_ASM208378v1	28360330	-
Cyanobacteria/Melainabacteria group bacterium S15B-MN24 CBMW_12	1919279	PRJNA348150	348150	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.90679	63.8	-	DAZV01	62	-	-	4/10/17	4/10/17	Contig	University of Queensland	SAMN05981169	GCA_002083825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/825/GCA_002083825.1_ASM208382v1	28360330	-
Cyanobacteria/Melainabacteria group bacterium GL2-53 LSPB_72	1919281	PRJNA348152	348152	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.46576	53.1	-	DAZW01	563	-	-	4/10/17	4/10/17	Scaffold	University of Queensland	SAMN05981171	GCA_002083815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/815/GCA_002083815.1_ASM208381v1	28360330	-
Thiotrichaceae bacterium IS1	1934244	PRJNA340050	340050	Proteobacteria	Gammaproteobacteria	2.35525	42.8	-	MTEK01	404	2076	1974	4/10/17	4/10/17	Scaffold	University of Michigan	SAMN06213955	GCA_002083855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/855/GCA_002083855.1_ASM208385v1	-	-
Candidatus Parcubacteria bacterium A4	1934245	PRJNA340050	340050	unclassified Bacteria	Bacteria candidate phyla	0.221024	37.2	-	MTEP01	33	276	247	4/10/17	4/10/17	Scaffold	University of Michigan	SAMN06213950	GCA_002083895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/895/GCA_002083895.1_ASM208389v1	-	-
Verrucomicrobia bacterium A1	1934251	PRJNA340050	340050	PVC group	Verrucomicrobia	2.00334	67.3	-	MTEN01	307	1873	1793	4/10/17	4/10/17	Scaffold	University of Michigan	SAMN06213953	GCA_002083885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/885/GCA_002083885.1_ASM208388v1	-	-
Desulfobacteraceae bacterium A6	1934249	PRJNA340050	340050	Proteobacteria	delta/epsilon subdivisions	1.73726	45.6	-	MTEQ01	218	1692	1627	4/10/17	4/10/17	Scaffold	University of Michigan	SAMN06213948	GCA_002083965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/965/GCA_002083965.1_ASM208396v1	-	-
Desulfobulbaceae bacterium A2	1934250	PRJNA340050	340050	Proteobacteria	delta/epsilon subdivisions	6.3904	61.5	-	MTEO01	486	5745	5540	4/10/17	4/10/17	Scaffold	University of Michigan	SAMN06213952	GCA_002083975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/975/GCA_002083975.1_ASM208397v1	-	-
Desulfobacteraceae bacterium IS3	1934248	PRJNA340050	340050	Proteobacteria	delta/epsilon subdivisions	13.4798	46	-	MTEM01	1475	12704	12176	4/10/17	4/10/17	Scaffold	University of Michigan	SAMN06213971	GCA_002083955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/955/GCA_002083955.1_ASM208395v1	-	-
Candidatus Altiarchaeales archaeon A3	1933927	PRJNA340050	340050	Euryarchaeota	unclassified Euryarchaeota	1.44693	31.8	-	MTER01	209	1411	1305	4/10/17	4/10/17	Scaffold	University of Michigan	SAMN06213951	GCA_002083985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/985/GCA_002083985.1_ASM208398v1	-	-
Elusimicrobia bacterium A5	1933928	PRJNA340050	340050	Elusimicrobia	unclassified Elusimicrobia	0.138304	40.4	-	MTES01	27	141	139	4/10/17	4/10/17	Contig	University of Michigan	SAMN06213949	GCA_002084035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/035/GCA_002084035.1_ASM208403v1	-	-
Gammaproteobacteria bacterium LUC14_002_19_P1	1940819	PRJNA368737	368737	Proteobacteria	Gammaproteobacteria	2.67521	64.4	-	MUHZ01	368	2561	2425	4/10/17	4/10/17	Contig	Clemson University	SAMN06271533	GCA_002084045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/045/GCA_002084045.1_ASM208404v1	-	-
Gammaproteobacteria bacterium LUC13017_P7	1940815	PRJNA368737	368737	Proteobacteria	Gammaproteobacteria	1.7578	64.2	-	MUIF01	609	2003	1896	4/10/17	4/10/17	Contig	Clemson University	SAMN06271913	GCA_002084055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/055/GCA_002084055.1_ASM208405v1	-	-
Gammaproteobacteria bacterium LUC13018_P8	1940814	PRJNA368737	368737	Proteobacteria	Gammaproteobacteria	1.38294	64.1	-	MUIG01	518	1588	1509	4/10/17	4/10/17	Contig	Clemson University	SAMN06271916	GCA_002084095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/095/GCA_002084095.1_ASM208409v1	-	-
Oceanospirillales bacterium LUC14_002_19_P2	1940822	PRJNA368737	368737	Proteobacteria	Gammaproteobacteria	3.3013	52.1	-	MUIA01	466	3086	2898	4/10/17	4/10/17	Contig	Clemson University	SAMN06271651	GCA_002084115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/115/GCA_002084115.1_ASM208411v1	-	-
Gammaproteobacteria bacterium LUC005_P12	1940810	PRJNA368737	368737	Proteobacteria	Gammaproteobacteria	0.360709	63.1	-	MUIK01	169	430	411	4/10/17	4/10/17	Contig	Clemson University	SAMN06271920	GCA_002084125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/125/GCA_002084125.1_ASM208412v1	-	-
Gammaproteobacteria bacterium LUC13013_P4	1940818	PRJNA368737	368737	Proteobacteria	Gammaproteobacteria	2.798	64.2	-	MUIC01	423	2711	2566	4/10/17	4/10/17	Contig	Clemson University	SAMN06271653	GCA_002084175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/175/GCA_002084175.1_ASM208417v1	-	-
Gammaproteobacteria bacterium LUC13015_P5	1940817	PRJNA368737	368737	Proteobacteria	Gammaproteobacteria	2.68678	64.5	-	MUID01	336	2563	2417	4/10/17	4/10/17	Contig	Clemson University	SAMN06271911	GCA_002084195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/195/GCA_002084195.1_ASM208419v1	-	-
Gammaproteobacteria bacterium LUC001_P9	1940813	PRJNA368737	368737	Proteobacteria	Gammaproteobacteria	0.321819	62.8	-	MUIH01	150	387	363	4/10/17	4/10/17	Contig	Clemson University	SAMN06271917	GCA_002084205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/205/GCA_002084205.1_ASM208420v1	-	-
Gammaproteobacteria bacterium LUC13016_P6	1940816	PRJNA368737	368737	Proteobacteria	Gammaproteobacteria	1.08353	64	-	MUIE01	440	1266	1190	4/10/17	4/10/17	Contig	Clemson University	SAMN06271912	GCA_002084215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/215/GCA_002084215.1_ASM208421v1	-	-
Gammaproteobacteria bacterium LUC003_P10	1940812	PRJNA368737	368737	Proteobacteria	Gammaproteobacteria	0.492432	62.2	-	MUII01	210	585	544	4/10/17	4/10/17	Contig	Clemson University	SAMN06271918	GCA_002084245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/245/GCA_002084245.1_ASM208424v1	-	-
Gammaproteobacteria bacterium LUC006_P13	1940809	PRJNA368737	368737	Proteobacteria	Gammaproteobacteria	1.7872	63.2	-	MUIL01	585	1963	1832	4/10/17	4/10/17	Contig	Clemson University	SAMN06271921	GCA_002084275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/275/GCA_002084275.1_ASM208427v1	-	-
Gammaproteobacteria bacterium LUC004_P11	1940811	PRJNA368737	368737	Proteobacteria	Gammaproteobacteria	1.20266	62.9	-	MUIJ01	455	1387	1300	4/10/17	4/10/17	Contig	Clemson University	SAMN06271919	GCA_002084295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/295/GCA_002084295.1_ASM208429v1	-	-
Bacteroidetes bacterium 4572_128	1971633	PRJNA362212	362212	FCB group	Bacteroidetes/Chlorobi group	2.60589	23.2	-	NBLL01	151	2369	2169	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06628309	GCA_002084355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/355/GCA_002084355.1_ASM208435v1	-	-
Desulfobacteraceae bacterium 4572_19	1971626	PRJNA362212	362212	Proteobacteria	delta/epsilon subdivisions	1.16728	34.6	-	NBLS01	119	1156	1060	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06628318	GCA_002084385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/385/GCA_002084385.1_ASM208438v1	-	-
Anaerolineaceae bacterium 4572_32.1	1971623	PRJNA362212	362212	Terrabacteria group	Chloroflexi	2.43948	57.2	-	NBLV01	264	2338	2218	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06628327	GCA_002084345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/345/GCA_002084345.1_ASM208434v1	-	-
Desulfobacteraceae bacterium 4572_130	1971625	PRJNA362212	362212	Proteobacteria	delta/epsilon subdivisions	1.94354	29.5	-	NBLN01	24	1746	1652	4/10/17	4/10/17	Contig	The University of Texas at Austin	SAMN06628311	GCA_002084425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/425/GCA_002084425.1_ASM208442v1	-	-
Tenericutes bacterium 4572_104	1971635	PRJNA362212	362212	Terrabacteria group	Tenericutes	0.97942	29.3	-	NBLG01	54	946	909	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06628225	GCA_002084435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/435/GCA_002084435.1_ASM208443v1	-	-
Fusobacteriia bacterium 4572_132	1971640	PRJNA362212	362212	Fusobacteria	Fusobacteriia	1.34705	26.3	-	NBLP01	147	1305	1242	4/10/17	4/10/17	Contig	The University of Texas at Austin	SAMN06628313	GCA_002084445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/445/GCA_002084445.1_ASM208444v1	-	-
Erwiniaceae bacterium 4572_131	1971639	PRJNA362212	362212	Proteobacteria	Gammaproteobacteria	0.606867	26.1	-	NBLO01	46	593	516	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06628312	GCA_002084455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/455/GCA_002084455.1_ASM208445v1	-	-
Rickettsiaceae bacterium 4572_127	1971637	PRJNA362212	362212	Proteobacteria	Alphaproteobacteria	0.662122	32.1	-	NBLK01	49	719	696	4/10/17	4/10/17	Contig	The University of Texas at Austin	SAMN06628308	GCA_002084505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/505/GCA_002084505.1_ASM208450v1	-	-
Bacteroidetes bacterium 4572_117	1971632	PRJNA362212	362212	FCB group	Bacteroidetes/Chlorobi group	3.37758	33.1	-	NBLH01	294	2958	2833	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06628290	GCA_002084525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/525/GCA_002084525.1_ASM208452v1	-	-
candidate division KSB1 4572_119	1971636	PRJNA362212	362212	unclassified Bacteria	Bacteria candidate phyla	2.26046	38.5	-	NBLI01	254	1936	1854	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06628291	GCA_002084535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/535/GCA_002084535.1_ASM208453v1	-	-
Desulfobacteraceae bacterium 4572_123	1971629	PRJNA362212	362212	Proteobacteria	delta/epsilon subdivisions	3.18193	47.5	-	NBLJ01	168	3018	2883	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06628302	GCA_002084545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/545/GCA_002084545.1_ASM208454v1	-	-
Planctomycetales bacterium 4572_13	1971638	PRJNA362212	362212	PVC group	Planctomycetes	1.81433	50.1	-	NBLM01	119	1733	1666	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06628310	GCA_002084585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/585/GCA_002084585.1_ASM208458v1	-	-
Anaerolineaceae bacterium 4572_32.2	1971624	PRJNA362212	362212	Terrabacteria group	Chloroflexi	3.49683	59.3	-	NBLW01	283	3209	3092	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06628328	GCA_002084625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/625/GCA_002084625.1_ASM208462v1	-	-
Desulfobacteraceae bacterium 4572_35.2	1971628	PRJNA362212	362212	Proteobacteria	delta/epsilon subdivisions	1.89512	46.1	-	NBLY01	129	1900	1719	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06628330	GCA_002084665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/665/GCA_002084665.1_ASM208466v1	-	-
Desulfobacterium sp. 4572_20	1971621	PRJNA362212	362212	Proteobacteria	delta/epsilon subdivisions	1.81372	42	-	NBLT01	170	1878	1783	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06628321	GCA_002084685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/685/GCA_002084685.1_ASM208468v1	-	-
Desulfobacteraceae bacterium 4572_35.1	1971627	PRJNA362212	362212	Proteobacteria	delta/epsilon subdivisions	2.32869	45.6	-	NBLX01	166	2274	2157	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06628329	GCA_002084705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/705/GCA_002084705.1_ASM208470v1	-	-
Anaerolineaceae bacterium 4572_5.1	1971724	PRJNA362212	362212	Terrabacteria group	Chloroflexi	2.55059	48.4	-	NBLZ01	274	2386	2291	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06638369	GCA_002084715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/715/GCA_002084715.1_ASM208471v1	-	-
Anaerolineaceae bacterium 4572_5.2	1971725	PRJNA362212	362212	Terrabacteria group	Chloroflexi	2.81417	50.3	-	NBMA01	311	2844	2680	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06638385	GCA_002084745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/745/GCA_002084745.1_ASM208474v1	-	-
Candidatus Cloacimonetes bacterium 4572_55	1971726	PRJNA362212	362212	FCB group	Candidatus Cloacimonetes	4.0852	46.3	-	NBMB01	110	3004	2879	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06638386	GCA_002084765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/765/GCA_002084765.1_ASM208476v1	-	-
Spirochaetaceae bacterium 4572_7	1972456	PRJNA362212	362212	Spirochaetes	Spirochaetia	2.01663	31.9	-	NBME01	193	2196	2037	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06638389	GCA_002084785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/785/GCA_002084785.1_ASM208478v1	-	-
Spirochaetaceae bacterium 4572_59	1971727	PRJNA362212	362212	Spirochaetes	Spirochaetia	3.28799	43.1	-	NBMC01	93	3119	2998	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06638387	GCA_002084805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/805/GCA_002084805.1_ASM208480v1	-	-
Fusobacteriia bacterium 4572_74	1972457	PRJNA362212	362212	Fusobacteria	Fusobacteriia	1.36848	30.7	-	NBMF01	77	1350	1250	4/10/17	4/10/17	Contig	The University of Texas at Austin	SAMN06638390	GCA_002084825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/825/GCA_002084825.1_ASM208482v1	-	-
Candidatus Cloacimonetes bacterium 4572_65	1972455	PRJNA362212	362212	FCB group	Candidatus Cloacimonetes	1.36957	33.2	-	NBMD01	145	1257	1201	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06638388	GCA_002084835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/835/GCA_002084835.1_ASM208483v1	-	-
Candidatus Atribacteria bacterium 4572_76	1972458	PRJNA362212	362212	unclassified Bacteria	Bacteria candidate phyla	1.06908	35.1	-	NBMG01	116	1055	952	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06638404	GCA_002084865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/865/GCA_002084865.1_ASM208486v1	-	-
Anaerolineaceae bacterium 4572_78	1972460	PRJNA362212	362212	Terrabacteria group	Chloroflexi	4.1042	39.7	-	NBMH01	252	3504	3339	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06638406	GCA_002084875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/875/GCA_002084875.1_ASM208487v1	-	-
Epsilonproteobacteria bacterium 4484_20	1968526	PRJNA362212	362212	Proteobacteria	delta/epsilon subdivisions	0.984449	46.9	-	MZGH01	122	1095	935	4/10/17	4/10/17	Contig	The University of Texas at Austin	SAMN06560459	GCA_002084905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/905/GCA_002084905.1_ASM208490v1	-	-
Desulfobacteraceae bacterium 4572_87	1972443	PRJNA362212	362212	Proteobacteria	delta/epsilon subdivisions	3.00866	50.4	-	NBMJ01	330	3081	2811	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06638422	GCA_002084945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/945/GCA_002084945.1_ASM208494v1	-	-
candidate division CPR3 bacterium 4484_211	1968527	PRJNA362212	362212	unclassified Bacteria	Bacteria candidate phyla	0.826021	44.4	-	MZGJ01	39	810	758	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06560473	GCA_002084955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/955/GCA_002084955.1_ASM208495v1	-	-
Candidatus Aminicenantes bacterium 4484_214	1968529	PRJNA362212	362212	unclassified Bacteria	Bacteria candidate phyla	2.45339	43	-	MZGL01	103	2240	2160	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06560477	GCA_002084995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/995/GCA_002084995.1_ASM208499v1	-	-
Candidatus Omnitrophica bacterium 4484_213	1968528	PRJNA362212	362212	PVC group	Candidatus Omnitrophica	0.932608	40.4	-	MZGK01	53	1010	928	4/10/17	4/10/17	Contig	The University of Texas at Austin	SAMN06560474	GCA_002085025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/025/GCA_002085025.1_ASM208502v1	-	-
candidate division KSB1 bacterium 4484_219	1968530	PRJNA362212	362212	unclassified Bacteria	Bacteria candidate phyla	1.43317	42.5	-	MZGM01	154	1423	1354	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06560478	GCA_002085035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/035/GCA_002085035.1_ASM208503v1	-	-
Helicobacteraceae bacterium 4484_230	1968531	PRJNA362212	362212	Proteobacteria	delta/epsilon subdivisions	1.57719	44.2	-	MZGN01	141	1683	1543	4/10/17	4/10/17	Contig	The University of Texas at Austin	SAMN06560479	GCA_002085085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/085/GCA_002085085.1_ASM208508v1	-	-
Desulfococcus sp. 4484_242	1968523	PRJNA362212	362212	Proteobacteria	delta/epsilon subdivisions	1.93619	54.6	-	MZGR01	239	1770	1698	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06562070	GCA_002085095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/095/GCA_002085095.1_ASM208509v1	-	-
Edwardsiella ictaluri	67780	PRJNA380243	380243	Proteobacteria	Gammaproteobacteria	3.63064	57.4	chromosome:NZ_CP020466.1/CP020466.1	-	1	3378	2945	4/3/17	4/5/17	Complete Genome	Mississippi State University	SAMN06637964	GCA_002076875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/875/GCA_002076875.1_ASM207687v1	-	RUSVM-1
Desulfamplus magnetovallimortis	1246637	PRJEB14757	335977	Proteobacteria	delta/epsilon subdivisions	6.678	40.7	-	FWEV01	108	5461	5089	3/22/17	8/3/17	Scaffold	CNRS	SAMEA100367668	GCA_900170035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/035/GCA_900170035.1_Desulfamplus_magnetomortis_BW-1	-	-
Pelobacter acetylenicus	29542	PRJNA319824	319824	Proteobacteria	delta/epsilon subdivisions	3.20605	57.4	chromosome:NZ_CP015455.1/CP015455.1; plasmid unnamed:NZ_CP015456.1/CP015456.1	-	2	2994	2793	12/2/16	9/8/17	Complete Genome	US Geological Survey	SAMN04909691	GCA_001888165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/165/GCA_001888165.1_ASM188816v1	-	DSM 3246
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA295651	295651	Proteobacteria	Gammaproteobacteria	5.34458	57.4	chromosome:NZ_CP012745.1/CP012745.1	-	1	5343	5079	9/26/16	2/21/17	Complete Genome	RGNOSIS	SAMN04087463	GCA_001746535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/535/GCA_001746535.1_ASM174653v1	-	TGH13
Pseudaminobacter manganicus	1873176	PRJNA338732	338732	Proteobacteria	Alphaproteobacteria	4.84294	61.2	-	MDET01	60	4755	4526	3/31/17	4/6/17	Contig	Huazhong Agricultural University	SAMN05526244	GCA_002075885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/885/GCA_002075885.1_ASM207588v1	28036252	JH-7
Mycobacterium komanii	1566885	PRJEB9486	285977	Terrabacteria group	Actinobacteria	5.37897	67.3	-	CVTA01	65	5181	5022	6/8/15	8/1/17	Contig	Centre for Proteomic and Genomic Research	SAMEA3432687	GCA_001050035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/035/GCA_001050035.1_Mycobacterium_komanii_GPK_1020	-	GPK 1020
Arcanobacterium urinimassiliense	1871014	PRJEB17951	353837	Terrabacteria group	Actinobacteria	1.68441	49.1	-	FPJH01	2	1491	1419	11/17/16	4/17/17	Scaffold	URMITE	SAMEA4548673	GCA_900119495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/495/GCA_900119495.1_PRJEB17951	-	Marseille-P3248
Prevotella ihumii	1917878	PRJEB18939	361096	FCB group	Bacteroidetes/Chlorobi group	3.3234	42.1	-	FTLS01	19	2871	2588	1/14/17	4/17/17	Scaffold	URMITE	SAMEA48260668	GCA_900155655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/655/GCA_900155655.1_Prevotella_ihuae	-	Marseille-P3385
Varibaculum timonense	1964383	PRJEB19967	379100	Terrabacteria group	Actinobacteria	2.73621	33.2	-	FWDK01	5	2657	2559	3/18/17	4/17/17	Scaffold	URMITE	SAMEA103910486	GCA_900169515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/515/GCA_900169515.1_PRJEB19967	-	Marseille-P3369
Metallibacterium scheffleri	993689	PRJNA279832	279832	Proteobacteria	Gammaproteobacteria	3.75569	65.8	-	LDOS01	5	3399	3263	4/3/17	4/5/17	Scaffold	KIT Karlsruhe	SAMN03450778	GCA_002077135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/135/GCA_002077135.1_ASM207713v1	28137766	DKE6
Niastella vici	1703345	PRJNA316778	316778	FCB group	Bacteroidetes/Chlorobi group	10.0583	44.5	-	LVYD01	134	8028	7861	4/3/17	4/5/17	Contig	Huzhong Agricultural University	SAMN04590022	GCA_002077945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/945/GCA_002077945.1_ASM207794v1	-	DJ57
Niastella populi	550983	PRJNA317195	317195	FCB group	Bacteroidetes/Chlorobi group	8.61293	45.4	-	LWBP01	264	6759	6558	4/3/17	4/5/17	Contig	Huzhong Agricultural University	SAMN04601197	GCA_002078015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/015/GCA_002078015.1_ASM207801v1	-	208
Klebsiella pneumoniae	573	PRJNA330755	330755	Proteobacteria	Gammaproteobacteria	5.41296	57.4	chromosome:NZ_CP016813.1/CP016813.1	-	1	5290	5057	8/19/16	2/22/17	Complete Genome	National Kaohsiung Normal University	SAMN05425525	GCA_001708245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/245/GCA_001708245.1_ASM170824v1	-	ED2
Tolumonas lignilytica	1283284	PRJNA186459	186459	Proteobacteria	Gammaproteobacteria	3.63224	47.5	-	AZUK01	9	3385	3240	1/3/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02597189	GCA_000527035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/035/GCA_000527035.1_ASM52703v1	26594307	BRL6-1
Edwardsiella tarda	636	PRJNA282821	282821	Proteobacteria	Gammaproteobacteria	3.6207	57.4	chromosome:NZ_CP011359.1/CP011359.1	-	1	3344	3152	5/21/15	4/3/17	Complete Genome	Mississippi State University	SAMN03579666	GCA_001011055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/055/GCA_001011055.1_ASM101105v1	26112788	FL95-01
Candidatus Parcubacteria bacterium 4484_255	1970769	PRJNA362212	362212	unclassified Bacteria	Bacteria candidate phyla	0.726962	34.4	-	NATD01	53	761	697	4/10/17	4/10/17	Contig	The University of Texas at Austin	SAMN06624595	GCA_002085145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/145/GCA_002085145.1_ASM208514v1	-	-
Sorangiineae bacterium NIC37A_2	1970199	PRJNA379904	379904	Proteobacteria	delta/epsilon subdivisions	5.00176	63.7	-	NASX01	150	4195	4096	4/10/17	4/10/17	Contig	Lawrence Berkeley National Lab	SAMN06622702	GCA_002085155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/155/GCA_002085155.1_ASM208515v1	25136443	-
Bacteroidetes bacterium 4484_249	1970778	PRJNA362212	362212	FCB group	Bacteroidetes/Chlorobi group	3.47041	35.4	-	NATE01	385	3058	2962	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06624596	GCA_002085165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/165/GCA_002085165.1_ASM208516v1	-	-
Bacteroidetes bacterium 4484_276	1970779	PRJNA362212	362212	FCB group	Bacteroidetes/Chlorobi group	3.32105	39.9	-	NATG01	342	3052	2919	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06624598	GCA_002085215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/215/GCA_002085215.1_ASM208521v1	-	-
Campylobacteraceae bacterium 4484_4	1970775	PRJNA362212	362212	Proteobacteria	delta/epsilon subdivisions	1.61932	49.2	-	NATH01	76	1734	1667	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06624599	GCA_002085225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/225/GCA_002085225.1_ASM208522v1	-	-
Candidatus Latescibacteria bacterium 4484_7	1970771	PRJNA362212	362212	FCB group	Candidatus Latescibacteria	1.53128	50.9	-	NATK01	161	1486	1432	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06624621	GCA_002085285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/285/GCA_002085285.1_ASM208528v1	-	-
Candidatus Omnitrophica bacterium 4484_49	1970784	PRJNA362212	362212	PVC group	Candidatus Omnitrophica	0.891312	39.5	-	NATI01	85	984	936	4/10/17	4/10/17	Contig	The University of Texas at Austin	SAMN06624600	GCA_002085265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/265/GCA_002085265.1_ASM208526v1	-	-
Epsilonproteobacteria bacterium 4484_65	1970777	PRJNA362212	362212	Proteobacteria	delta/epsilon subdivisions	1.12711	38	-	NATJ01	124	1234	1157	4/10/17	4/10/17	Contig	The University of Texas at Austin	SAMN06624620	GCA_002085305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/305/GCA_002085305.1_ASM208530v1	-	-
Candidatus Omnitrophica bacterium 4484_70.1	1970782	PRJNA362212	362212	PVC group	Candidatus Omnitrophica	1.70116	34.1	-	NATL01	76	1702	1625	4/10/17	4/10/17	Contig	The University of Texas at Austin	SAMN06624652	GCA_002085315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/315/GCA_002085315.1_ASM208531v1	-	-
Candidatus Omnitrophica bacterium 4484_70.2	1970783	PRJNA362212	362212	PVC group	Candidatus Omnitrophica	1.65032	33.4	-	NATM01	142	1762	1695	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06624653	GCA_002085345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/345/GCA_002085345.1_ASM208534v1	-	-
candidate division KSB1 bacterium 4484_87	1970772	PRJNA362212	362212	unclassified Bacteria	Bacteria candidate phyla	2.72021	42.9	-	NATN01	274	2433	2366	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06624654	GCA_002085355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/355/GCA_002085355.1_ASM208535v1	-	-
candidate division Zixibacteria bacterium 4484_95	1970781	PRJNA362212	362212	FCB group	candidate division Zixibacteria	2.17473	40.9	-	NATP01	159	2034	1976	4/10/17	4/10/17	Contig	The University of Texas at Austin	SAMN06624697	GCA_002085375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/375/GCA_002085375.1_ASM208537v1	-	-
candidate division Zixibacteria bacterium 4484_93	1970780	PRJNA362212	362212	FCB group	candidate division Zixibacteria	1.29079	48.6	-	NATO01	129	1259	1213	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06624686	GCA_002085385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/385/GCA_002085385.1_ASM208538v1	-	-
Candidatus Coatesbacteria bacterium 4484_99	1970774	PRJNA362212	362212	unclassified Bacteria	Bacteria candidate phyla	0.955968	42.5	-	NATQ01	109	1023	982	4/10/17	4/10/17	Contig	The University of Texas at Austin	SAMN06624699	GCA_002085425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/425/GCA_002085425.1_ASM208542v1	-	-
Desulfobacteraceae bacterium 4572_88	1972444	PRJNA362212	362212	Proteobacteria	delta/epsilon subdivisions	5.1265	49.6	-	NBMK01	434	4879	4673	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06638423	GCA_002085455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/455/GCA_002085455.1_ASM208545v1	-	-
Desulfobacteraceae bacterium 4572_89	1972445	PRJNA362212	362212	Proteobacteria	delta/epsilon subdivisions	1.69552	43.6	-	NBML01	98	1624	1525	4/10/17	4/10/17	Contig	The University of Texas at Austin	SAMN06638424	GCA_002085465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/465/GCA_002085465.1_ASM208546v1	-	-
Chryseobacterium cucumeris	1813611	PRJNA315046	315046	FCB group	Bacteroidetes/Chlorobi group	5.32948	36.1	-	LUVZ01	47	4773	4653	3/17/16	4/18/17	Contig	Korea University	SAMN04544318	GCA_001593385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/385/GCA_001593385.1_ASM159338v1	27313310	GSE06
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA253462	253462	Proteobacteria	Gammaproteobacteria	5.37483	57.4	chromosome:NZ_CP009208.1/CP009208.1	-	1	5286	5033	8/21/14	2/21/17	Complete Genome	University of North Carolina at Chapel Hill	SAMN02982872	GCA_000742755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/755/GCA_000742755.1_ASM74275v1	25291761	ATCC 43816 KPPR1
Mycobacterium bacteremicum	564198	PRJNA354248	354248	Terrabacteria group	Actinobacteria	5.95204	68.1	-	MVHJ01	85	5697	5547	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064232	GCA_002086115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/115/GCA_002086115.1_ASM208611v1	-	DSM 45578
Mycobacterium angelicum	470074	PRJNA354248	354248	Terrabacteria group	Actinobacteria	6.66291	66.3	-	MVHE01	525	5764	5379	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064227	GCA_002086155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/155/GCA_002086155.1_ASM208615v1	-	DSM 45057
Mycobacterium bouchedurhonense	701041	PRJNA354248	354248	Terrabacteria group	Actinobacteria	5.89731	68.6	-	MVHL01	230	5653	5302	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064234	GCA_002086165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/165/GCA_002086165.1_ASM208616v1	-	DSM 45439
Mycobacterium celeriflavum	1249101	PRJNA354248	354248	Terrabacteria group	Actinobacteria	4.94945	66.9	-	MVHN01	129	4751	4624	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064236	GCA_002086175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/175/GCA_002086175.1_ASM208617v1	-	DSM 46765
Mycobacterium heidelbergense	53376	PRJNA354248	354248	Terrabacteria group	Actinobacteria	4.99911	68	-	MVHR01	110	4653	4417	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064240	GCA_002086215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/215/GCA_002086215.1_ASM208621v1	-	DSM 44471
Mycobacterium insubricum	444597	PRJNA354248	354248	Terrabacteria group	Actinobacteria	4.55368	68.9	-	MVHS01	157	4314	4090	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064241	GCA_002086255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/255/GCA_002086255.1_ASM208625v1	-	DSM 45130
Mycobacterium mantenii	560555	PRJNA354248	354248	Terrabacteria group	Actinobacteria	6.12189	66.9	-	MVHW01	157	5724	5422	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064245	GCA_002086335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/335/GCA_002086335.1_ASM208633v1	-	DSM 45255
Klebsiella pneumoniae subsp. pneumoniae 1084	1193292	PRJNA167369	167369	Proteobacteria	Gammaproteobacteria	5.38671	57.4	chromosome:NC_018522.1/CP003785.1	-	1	5263	4963	8/29/12	2/21/17	Complete Genome	National Chung Hsing University	SAMN02603641	GCA_000294365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/365/GCA_000294365.1_ASM29436v1	23105059	1084
Mycobacterium moriokaense	39691	PRJNA354248	354248	Terrabacteria group	Actinobacteria	6.21736	66	-	MVIB01	229	6060	5842	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064251	GCA_002086395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/395/GCA_002086395.1_ASM208639v1	-	CIP105393
Mycobacterium minnesotense	1118379	PRJNA354248	354248	Terrabacteria group	Actinobacteria	4.18782	67.1	-	MVHZ01	60	3902	3703	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064248	GCA_002086405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/405/GCA_002086405.1_ASM208640v1	-	DSM 45633
Mycobacterium noviomagense	459858	PRJNA354248	354248	Terrabacteria group	Actinobacteria	4.73974	65.8	-	MVIC01	227	4514	4254	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064252	GCA_002086415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/415/GCA_002086415.1_ASM208641v1	-	DSM 45145
Mycobacterium algericum DSM 45454	723879	PRJNA354248	354248	Terrabacteria group	Actinobacteria	4.61928	68.3	-	MVHC01	107	4440	4220	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064225	GCA_002086455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/455/GCA_002086455.1_ASM208645v1	-	DSM 45454
Mycobacterium paraseoulense	590652	PRJNA354248	354248	Terrabacteria group	Actinobacteria	6.07849	67.9	-	MVIE01	267	5727	5490	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064254	GCA_002086475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/475/GCA_002086475.1_ASM208647v1	-	DSM 45000
Mycobacterium branderi	43348	PRJNA354248	354248	Terrabacteria group	Actinobacteria	5.90351	66.5	-	MVHM01	63	5732	5520	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064235	GCA_002086575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/575/GCA_002086575.1_ASM208657v1	-	DSM 44624
Mycobacterium alsense	324058	PRJNA354248	354248	Terrabacteria group	Actinobacteria	5.69285	69.3	-	MVHD01	157	5355	5087	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064226	GCA_002086635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/635/GCA_002086635.1_ASM208663v1	-	DSM 45230
Mycobacterium shinjukuense	398694	PRJNA354248	354248	Terrabacteria group	Actinobacteria	4.4099	67.8	-	MVIK01	180	4065	3701	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064260	GCA_002086755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/755/GCA_002086755.1_ASM208675v1	-	CCUG 53584
Mycobacterium timonense	701043	PRJNA354248	354248	Terrabacteria group	Actinobacteria	6.00999	68.5	-	MVIL01	1217	5664	5156	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064261	GCA_002086775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/775/GCA_002086775.1_ASM208677v1	-	CCUG 56329
Mycobacterium parafortuitum	39692	PRJNA354248	354248	Terrabacteria group	Actinobacteria	6.13611	68.5	-	MVID01	88	5758	5635	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064253	GCA_002086815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/815/GCA_002086815.1_ASM208681v1	-	CCUG 20999
Rothia nasimurium	85336	PRJNA321506	321506	Terrabacteria group	Actinobacteria	2.67868	58	-	LXWF01	45	2373	2274	4/11/17	4/13/17	Contig	Wageningen University	SAMN04998822	GCA_002087015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/015/GCA_002087015.1_ASM208701v1	-	PT-32
Olegusella massiliensis	1776381	PRJEB13207	316946	Terrabacteria group	Actinobacteria	1.80674	49.2	-	FLLS01	2	1594	1524	5/26/16	4/18/17	Contig	URMITE	SAMEA3911737	GCA_900078545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/545/GCA_900078545.1_PRJEB13207	-	KHD7
Halomonas lionensis	1144478	PRJNA378342	378342	Proteobacteria	Gammaproteobacteria	3.64665	55.9	-	MWVI01	100	3523	2300	4/12/17	4/17/17	Contig	Centre de Biophysique Moleculaire	SAMN06545309	GCA_002087295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/295/GCA_002087295.1_ASM208729v1	25086262	RHS90
Pseudophaeobacter leonis	1144477	PRJNA378343	378343	Proteobacteria	Alphaproteobacteria	4.82159	58.7	-	MWVJ01	135	4575	3390	4/12/17	4/17/17	Contig	Centre de Biophysique Moleculaire	SAMN06545315	GCA_002087335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/335/GCA_002087335.1_ASM208733v1	23475346	306
Oceanococcus atlanticus	1317117	PRJNA196734	196734	Proteobacteria	Gammaproteobacteria	3.652	60.6	-	AQQV01	14	3332	3263	4/12/17	4/16/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN03097562	GCA_002088235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/235/GCA_002088235.1_ASM208823v1	-	22II-S10r2
Millionella massiliensis	1871023	PRJEB16360	349282	FCB group	Bacteroidetes/Chlorobi group	2.88882	57.1	-	FNWD01	2	2198	2121	10/27/16	4/26/17	Contig	URMITE	SAMEA4519306	GCA_900104655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/655/GCA_900104655.1_PRJEB16360	-	Marseille-P3215
Henriciella litoralis	568102	PRJNA381091	381091	Proteobacteria	Alphaproteobacteria	3.77509	58.9	-	NCSS01	6	3650	3576	4/13/17	4/17/17	Scaffold	"Second Institute of Oceanography, State Oceanic Administration"	SAMN06670198	GCA_002088935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/935/GCA_002088935.1_ASM208893v1	-	DSM 22014
Henriciella aquimarina	545261	PRJNA381091	381091	Proteobacteria	Alphaproteobacteria	4.33583	62.2	-	NCST01	132	4230	4021	4/13/17	4/17/17	Contig	"Second Institute of Oceanography, State Oceanic Administration"	SAMN06670197	GCA_002088975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/975/GCA_002088975.1_ASM208897v1	-	LMG 24711
Moheibacter sediminis	1434700	PRJEB20335	382096	FCB group	Bacteroidetes/Chlorobi group	3.22924	35.8	-	FWXS01	27	2984	2922	4/8/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06296427	GCA_900176425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/425/GCA_900176425.1_IMG-taxon_2718217654_annotated_assembly	-	CGMCC 1.12708
Desulfacinum hydrothermale DSM 13146	1121390	PRJEB20321	382115	Proteobacteria	delta/epsilon subdivisions	3.69679	61	-	FWXF01	59	3313	3175	4/8/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02746041	GCA_900176285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/285/GCA_900176285.1_IMG-taxon_2585428172_annotated_assembly	-	DSM 13146
Andreprevotia lacus DSM 23236	1121001	PRJEB20317	382118	Proteobacteria	Betaproteobacteria	4.6262	62.1	-	FWXD01	83	4363	4183	4/8/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745857	GCA_900176275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/275/GCA_900176275.1_IMG-taxon_2568526002_annotated_assembly	-	DSM 23236
Cellulophaga tyrosinoxydans	504486	PRJEB20339	382100	FCB group	Bacteroidetes/Chlorobi group	3.55579	33.2	-	FWXO01	11	3160	3090	4/8/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660703	GCA_900176415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/415/GCA_900176415.1_IMG-taxon_2595698249_annotated_assembly	-	DSM 21164
Clostridiales bacterium	1898207	PRJEB20324	382106	Terrabacteria group	Firmicutes	3.40885	53.5	-	FWXZ01	16	3066	2981	4/8/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06297397	GCA_900176495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/495/GCA_900176495.1_IMG-taxon_2608642216_annotated_assembly	-	WTE2008
Marinobacter hydrocarbonoclasticus ATCC 49840	1163748	PRJEA91119	91119	Proteobacteria	Gammaproteobacteria	3.98948	57.4	chromosome:NC_017067.1/FO203363.1	-	1	3697	3599	3/27/12	4/7/17	Complete Genome	Genoscope CEA	SAMEA2272383	GCA_000284615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/615/GCA_000284615.1_ASM28461v1	22689231	ATCC 49840
Enterobacter timonensis	1755099	PRJEB12555	310083	Proteobacteria	Gammaproteobacteria	4.19969	56.8	-	FCOP01	13	4044	3817	1/30/16	4/6/17	Contig	URMITE	SAMEA3859023	GCA_900021175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/175/GCA_900021175.1_Enterobacter_timonensis	-	mt20
Methyloprofundus sedimenti	1420851	PRJNA306177	306177	Proteobacteria	Gammaproteobacteria	4.29053	41	-	LPUF01	6	3922	3671	3/28/17	3/30/17	Contig	California Institute of Technology	SAMN04347413	GCA_002072955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/955/GCA_002072955.1_ASM207295v1	-	WF1
Candidatus Riesia pthiripubis	428412	PRJNA295781	295781	Proteobacteria	Gammaproteobacteria	0.533413	32.4837	chromosome:CP012846.1; plasmid unnamed:CP012847.1	-	2	557	77	3/29/17	3/29/17	Chromosome	University of Illinois Urbana-Champaign	SAMN04088565	GCA_002073955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/955/GCA_002073955.1_ASM207395v1	-	HPNA
Edwardsiella ictaluri 93-146	634503	PRJNA34853	34853	Proteobacteria	Gammaproteobacteria	3.8123	57.4	chromosome:NC_012779.2/CP001600.2	-	1	3597	3201	6/4/09	4/8/17	Complete Genome	The Laboratory for Genomics and Microbiology	SAMN02603942	GCA_000022885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/885/GCA_000022885.2_ASM2288v2	22247535	93-146
bacterium endosymbiont of Pedicinus badii	1719126	PRJNA295781	295781	unclassified Bacteria	unclassified Bacteria (miscellaneous)	0.558122	24.2	-	LKAS01	2	596	542	3/30/17	4/3/17	Contig	University of Illinois Urbana-Champaign	SAMN04088567	GCA_002075085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/085/GCA_002075085.1_ASM207508v1	28419279	PRUG
Oceanobacillus timonensis	1926285	PRJEB19430	374829	Terrabacteria group	Firmicutes	4.48534	38.8	-	FVZA01	3	4357	4203	3/18/17	4/3/17	Scaffold	URMITE	SAMEA89867668	GCA_900166635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/635/GCA_900166635.1_PRJEB19430	-	Marseille-P3532
Halobacillus massiliensis	1926286	PRJEB19420	374688	Terrabacteria group	Firmicutes	4.3124	41.5	-	FUVA01	2	4292	4098	3/18/17	4/10/17	Scaffold	URMITE	SAMEA88387168	GCA_900166625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/625/GCA_900166625.1_PRJEB19420	-	Marseille-P3554
Pseudoflavonifractor sp. Marseille-P3106	1871015	PRJEB20005	379405	Terrabacteria group	Firmicutes	3.11858	58.2	-	FWEL01	20	3203	3025	3/21/17	4/3/17	Scaffold	URMITE	SAMEA103911226	GCA_900169975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/975/GCA_900169975.1_PRJEB20005	-	Marseille-P3106
Klebsiella pneumoniae KP-1	1365186	PRJNA212238	212238	Proteobacteria	Gammaproteobacteria	5.37567	57.3971	chromosome:NZ_CP012883.1/CP012883.1; plasmid pKP1-19:NZ_CP012884.1/CP012884.1	-	2	5382	5092	10/22/15	2/21/17	Complete Genome	SCELSE/NTU	SAMN02470575	GCA_000465975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/975/GCA_000465975.2_ASM46597v2	24356844	KP-1
Fulvimarina manganoxydans	937218	PRJEB20344	382090	Proteobacteria	Alphaproteobacteria	4.82758	62.9	-	FWXR01	55	4458	4313	4/8/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06297251	GCA_900176465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/465/GCA_900176465.1_IMG-taxon_2718217637_annotated_assembly	-	CGMCC 1.10972
Mycoplasma agassizii	33922	PRJEB20320	382114	Terrabacteria group	Tenericutes	1.27621	28.4	-	FWXE01	39	1030	956	4/8/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02745179	GCA_900176265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/265/GCA_900176265.1_IMG-taxon_2585428149_annotated_assembly	-	ATCC 700616
Pseudooceanicola flagellatus	1387277	PRJEB20334	382099	Proteobacteria	Alphaproteobacteria	4.41415	60	-	FWYD01	73	4196	4020	4/8/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06295998	GCA_900176485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/485/GCA_900176485.1_IMG-taxon_2718217653_annotated_assembly	-	CGMCC 1.12644
Ruminococcaceae bacterium	1898205	PRJEB20338	382102	Terrabacteria group	Firmicutes	2.9776	46.4	-	FWXP01	20	2792	2705	4/8/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06296952	GCA_900176545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/545/GCA_900176545.1_IMG-taxon_2606217800_annotated_assembly	-	KHP2
Papillibacter cinnamivorans DSM 12816	1122930	PRJEB20323	382109	Terrabacteria group	Firmicutes	2.89061	55.8	-	FWXW01	20	2760	2658	4/8/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745168	GCA_900176335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/335/GCA_900176335.1_IMG-taxon_2588254267_annotated_assembly	-	DSM 12816
Clostridium acidisoli DSM 12555	1121291	PRJEB20318	382119	Terrabacteria group	Firmicutes	3.99996	30.1	-	FWXH01	62	3863	3691	4/8/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02745134	GCA_900176305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/305/GCA_900176305.1_IMG-taxon_2585428079_annotated_assembly	-	DSM 12555
Pedobacter nyackensis	475255	PRJEB20329	382111	FCB group	Bacteroidetes/Chlorobi group	6.07711	39.5	-	FWYB01	33	4980	4855	4/8/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488101	GCA_900176505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/505/GCA_900176505.1_IMG-taxon_2622736511_annotated_assembly	-	DSM 19625
Sporomusa malonica	112901	PRJEB20330	382105	Terrabacteria group	Firmicutes	5.19142	44.5	-	FWXI01	66	4957	4742	4/8/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488500	GCA_900176355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/355/GCA_900176355.1_IMG-taxon_2622736529_annotated_assembly	-	DSM 5090
Pedobacter africanus	151894	PRJEB20327	382113	FCB group	Bacteroidetes/Chlorobi group	5.72287	43.4	-	FWXT01	10	4779	4677	4/8/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488524	GCA_900176535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/535/GCA_900176535.1_IMG-taxon_2622736459_annotated_assembly	-	DSM 12126
Janibacter indicus	857417	PRJEB20331	382103	Terrabacteria group	Actinobacteria	3.41954	71.2	-	FWXN01	29	3341	3197	4/8/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06296429	GCA_900176385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/385/GCA_900176385.1_IMG-taxon_2718217638_annotated_assembly	-	CGMCC 1.12511
Reichenbachiella faecimaris	692418	PRJEB20325	382107	FCB group	Bacteroidetes/Chlorobi group	4.71156	39.8	-	FWYF01	7	4030	3938	4/8/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488029	GCA_900176375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/375/GCA_900176375.1_IMG-taxon_2619619645_annotated_assembly	-	DSM 26133
Aerococcus suis	371602	PRJEB20326	382112	Terrabacteria group	Firmicutes	1.3822	36.4	-	FWXK01	13	1353	1243	4/8/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487984	GCA_900176325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/325/GCA_900176325.1_IMG-taxon_2622736423_annotated_assembly	-	DSM 21500
Planomicrobium okeanokoites	244	PRJEB20355	382224	Terrabacteria group	Firmicutes	3.43421	45.4	-	FWYH01	10	3476	3379	4/9/17	4/17/17	Contig	URMITE	SAMEA103966498	GCA_900176575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/575/GCA_900176575.1_PRJEB20355	-	Marseille-P2029
Demequina sp. NBRC 110051	1570340	PRJDB3263	276645	Terrabacteria group	Actinobacteria	2.75414	69.1	-	BBRH01	25	2556	2484	4/1/17	4/17/17	Contig	National Institute of Technology and Evaluation Biological Resource Center	SAMD00022841	GCA_002090055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/055/GCA_002090055.1_ASM209005v1	-	NBRC 110051
Ileibacterium massiliense	1870997	PRJEB16358	349284	Terrabacteria group	Firmicutes	1.45082	35.9	-	FNWE01	2	1373	1292	10/27/16	4/26/17	Contig	URMITE	SAMEA4519299	GCA_900104645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/645/GCA_900104645.1_PRJEB16358	-	Marseille-P3115
Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044	484021	PRJDA21069	21069	Proteobacteria	Gammaproteobacteria	5.47267	57.3928	chromosome:NC_012731.1/AP006725.1; plasmid pK2044:NC_006625.1/AP006726.1	-	2	5417	5140	1/6/05	5/10/17	Complete Genome	National Health Research Institutes	SAMD00060934	GCA_000009885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/885/GCA_000009885.1_ASM988v1	19447910	NTUH-K2044
Collinsella bouchesdurhonensis	1907654	PRJEB18748	359777	Terrabacteria group	Actinobacteria	1.87621	57.9	-	FTLD01	15	1697	1622	1/4/17	4/16/17	Scaffold	URMITE	SAMEA37051168	GCA_900155365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/365/GCA_900155365.1_PRJEB18748	-	Marseille-P3296
Negativibacillus massiliensis	1871035	PRJEB16359	349283	Terrabacteria group	Firmicutes	2.87688	45.4	-	FTRU01	8	2805	2704	1/25/17	4/26/17	Contig	URMITE	SAMEA4519304	GCA_900148495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/495/GCA_900148495.1_PRJEB16359	-	Marseille-P3213
Geothermobacter sp. EPR-M	1969733	PRJNA379452	379452	Proteobacteria	delta/epsilon subdivisions	3.73005	59.4	-	NAAD01	59	3357	3251	4/17/17	4/21/17	Contig	University of Southern California	SAMN06608517	GCA_002093115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/115/GCA_002093115.1_ASM209311v1	-	EPR-M
Rouxiella silvae	1646373	PRJNA354933	354933	Proteobacteria	Gammaproteobacteria	5.28138	50.8	-	MRWD01	128	4915	4746	4/14/17	4/21/17	Scaffold	Institut Pasteur	SAMN06100418	GCA_002093625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/625/GCA_002093625.1_ASM209362v1	28100296	213
Rouxiella badensis	1646377	PRJNA354933	354933	Proteobacteria	Gammaproteobacteria	4.77779	53.2	-	MRWE01	72	4361	4245	4/14/17	4/21/17	Scaffold	Institut Pasteur	SAMN06101559	GCA_002093665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/665/GCA_002093665.1_ASM209366v1	28100296	DSM 100043
Thermoactinospora rubra	1088767	PRJNA354179	354179	Terrabacteria group	Actinobacteria	8.22079	71.7	-	MSZZ01	113	7843	7536	4/17/17	4/21/17	Scaffold	Yunnan Institute of Microbiology	SAMN06041775	GCA_002093975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/975/GCA_002093975.1_ASM209397v1	-	YIM 77501
Zunongwangia atlantica 22II14-10F7	1185767	PRJNA197240	197240	FCB group	Bacteroidetes/Chlorobi group	4.78072	35.5	-	ARYN01	89	4121	4014	4/17/17	4/21/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN06732891	GCA_002094855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/855/GCA_002094855.1_ASM209485v1	-	22II14-10F7
Brevirhabdus pacifica	1267768	PRJNA360895	360895	Proteobacteria	Alphaproteobacteria	3.3083	66.2	-	MTCO01	346	3317	2992	4/17/17	4/21/17	Scaffold	"Second Institute of Oceanography, State Oceanic Administration"	SAMN06216425	GCA_002094875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/875/GCA_002094875.1_ASM209487v1	-	22DY15
Rhodobacteraceae bacterium WDS1C4	1914408	PRJNA358472	358472	Proteobacteria	Alphaproteobacteria	2.91613	67.6	-	MSIT01	66	2896	2773	4/17/17	4/21/17	Contig	Shandong University at Weihai	SAMN06174327	GCA_002094885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/885/GCA_002094885.1_ASM209488v1	-	WDS1C4
Klebsiella pneumoniae	573	PRJNA354663	354663	Proteobacteria	Gammaproteobacteria	5.69906	57.3888	chromosome:NZ_CP018454.1/CP018454.1; plasmid unnamed:NZ_CP018455.1/CP018455.1	-	2	5816	5537	12/13/16	2/21/17	Complete Genome	Southwest Medical University	SAMN06109054	GCA_001902475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/475/GCA_001902475.1_ASM190247v1	-	SWU01
Collinsella phocaeensis	1871016	PRJEB18019	354773	Terrabacteria group	Actinobacteria	2.10546	65.5	-	FQLR01	4	1782	1689	11/23/16	4/26/17	Contig	URMITE	SAMEA4555188	GCA_900119895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/895/GCA_900119895.1_PRJEB18019	-	Marseille-P3245
Mailhella massiliensis	1903261	PRJEB18934	361098	Proteobacteria	delta/epsilon subdivisions	3.46567	59.1	-	FTLM01	28	3151	2986	1/13/17	4/17/17	Scaffold	URMITE	SAMEA47265418	GCA_900155525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/525/GCA_900155525.1_Mailhella_massiliensis	-	Marseille-P3199
Pantoea brenneri	472694	PRJNA252984	252984	Proteobacteria	Gammaproteobacteria	4.93318	55.7	-	MIEI01	241	4663	4058	4/18/17	8/4/17	Contig	University of Pretoria	SAMN05728469	GCA_002095305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/305/GCA_002095305.1_ASM209530v1	28255640	LMG 5343
Pantoea calida	665913	PRJNA252985	252985	Proteobacteria	Gammaproteobacteria	4.23953	57	-	MLFO01	275	4099	3606	4/18/17	4/21/17	Contig	University of Pretoria	SAMN05757634	GCA_002095355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/355/GCA_002095355.1_ASM209535v1	28255640	LMG 25383
Pantoea deleyi	470932	PRJNA252987	252987	Proteobacteria	Gammaproteobacteria	4.61385	57.7	-	MIPO01	361	4375	3666	4/18/17	4/18/17	Contig	University of Pretoria	SAMN05757637	GCA_002095375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/375/GCA_002095375.1_ASM209537v1	28255640	LMG 24200
Pantoea gaviniae	665914	PRJNA252989	252989	Proteobacteria	Gammaproteobacteria	4.46764	57.8	-	MLFQ01	667	4326	2602	4/18/17	4/18/17	Contig	University of Pretoria	SAMN05907791	GCA_002095455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/455/GCA_002095455.1_ASM209545v1	28255640	LMG 25382
Pantoea wallisii	1076551	PRJNA252993	252993	Proteobacteria	Gammaproteobacteria	4.65328	56.3	-	MLFS01	149	4306	3765	4/18/17	4/18/17	Contig	University of Pretoria	SAMN05907794	GCA_002095485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/485/GCA_002095485.1_ASM209548v1	28255640	LMG 26277
Pantoea cypripedii	55209	PRJNA252995	252995	Proteobacteria	Gammaproteobacteria	6.55382	54.1	-	MLJI01	3	6186	5914	4/18/17	4/21/17	Contig	University of Pretoria	SAMN05915831	GCA_002095535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/535/GCA_002095535.1_ASM209553v1	28255640	LMG 2657
Pantoea allii	574096	PRJNA403848	403848	Proteobacteria	Gammaproteobacteria	5.24114	52.9	-	NTMH01	57	4972	4709	9/17/17	9/19/17	Contig	Ottawa Research and Development Center	SAMN07625522	GCA_002307475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/475/GCA_002307475.1_ASM230747v1	-	LMG 24248
Halioglobus pacificus	930806	PRJNA360030	360030	Proteobacteria	Gammaproteobacteria	5.00357	57.3661	chromosome:NZ_CP019046.1/CP019046.1; plasmid pRR3-57:NZ_CP019045.1/CP019045.1	-	2	4493	4263	1/17/17	4/17/17	Complete Genome	Pukyong National University	SAMN06199441	GCA_001953075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/075/GCA_001953075.1_ASM195307v1	-	RR3-57
Kozakia baliensis	153496	PRJNA311264	311264	Proteobacteria	Alphaproteobacteria	3.5056	57.3501	chromosome:NZ_CP014674.1/CP014674.1; plasmid pKB14400_1:NZ_CP014675.1/CP014675.1; plasmid pKB14400_2:NZ_CP014676.1/CP014676.1; plasmid pKB14400_3:NZ_CP014677.1/CP014677.1; plasmid pKB14400_4:NZ_CP014678.1/CP014678.1; plasmid pKB14400_5:NZ_CP014679.1/CP014679.1; plasmid pKB14400_6:NZ_CP014680.1/CP014680.1	-	7	3388	3144	10/19/16	4/13/17	Complete Genome	Technische Universitaet Muenchen	SAMN04396914	GCA_001787335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/787/335/GCA_001787335.1_ASM178733v1	27716345	DSM 14400
Klebsiella pneumoniae	573	PRJNA323746	323746	Proteobacteria	Gammaproteobacteria	5.42072	57.3423	chromosome:NZ_CP015990.1/CP015990.1; plasmid pWSZBR:NZ_CP015991.1/CP015991.1	-	2	5354	5047	6/15/16	2/21/17	Complete Genome	Zhejiang Sci-Tech University	SAMN05188406	GCA_001663195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/195/GCA_001663195.1_ASM166319v1	-	BR
Francisella endosymbiont of Ornithodoros moubata	1981171	PRJNA315453	315453	Proteobacteria	Gammaproteobacteria	1.56419	31.7	-	LVCE01	8	1569	989	4/18/17	8/25/17	Contig	Portland State University	SAMN04562490	GCA_002095075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/075/GCA_002095075.2_ASM209507v2	27645766	FLE-Om
Klebsiella pneumoniae	573	PRJNA296771	296771	Proteobacteria	Gammaproteobacteria	5.55846	57.3358	chromosome:NZ_CP016811.1/CP016811.1; plasmid p_IncFIB_DHQP1002001:NZ_CP016810.1/CP016810.1; plasmid p_incR_DHQP1002001:NZ_CP016812.1/CP016812.1	-	3	5680	5309	8/12/16	2/21/17	Complete Genome	Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion	SAMN04448219	GCA_001704235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/235/GCA_001704235.1_ASM170423v1	-	DHQP1002001
Klebsiella pneumoniae KCTC 2242	1049565	PRJNA67293	67293	Proteobacteria	Gammaproteobacteria	5.46242	57.3252	chromosome:NC_017540.1/CP002910.1; plasmid pKCTC2242:NC_017541.1/CP002911.1	-	2	5434	5155	7/12/11	2/21/17	Complete Genome	Macrogen Inc.	SAMN02603582	GCA_000220485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/485/GCA_000220485.1_ASM22048v1	22535926	KCTC 2242
Mycobacterium florentinum	292462	PRJNA299467	299467	Terrabacteria group	Actinobacteria	6.17835	66.4	-	LQOV01	34	5843	5677	4/20/17	4/22/17	Contig	University of Trento	SAMN04216926	GCA_002101635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/635/GCA_002101635.1_ASM210163v1	-	DSM 44852
Mycobacterium engbaekii	188915	PRJNA299467	299467	Terrabacteria group	Actinobacteria	4.52144	68.5	-	LQOT01	79	4172	3980	4/20/17	4/22/17	Contig	University of Trento	SAMN04216923	GCA_002101585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/585/GCA_002101585.1_ASM210158v1	-	ATCC 27353
Mycobacterium hiberniae	29314	PRJNA299467	299467	Terrabacteria group	Actinobacteria	4.34219	68.5	-	LQOZ01	48	4062	3913	4/20/17	4/22/17	Contig	University of Trento	SAMN04216930	GCA_002101655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/655/GCA_002101655.1_ASM210165v1	-	ATCC 49874
Mycobacterium paraense	767916	PRJNA308282	308282	Terrabacteria group	Actinobacteria	5.61953	69.3	-	LQPM01	51	5358	5196	4/20/17	4/22/17	Contig	University of Trento	SAMN04216942	GCA_002101815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/815/GCA_002101815.1_ASM210181v1	25487637	IEC26
Paraburkholderia caryophylli	28094	PRJEB20452	382916	Proteobacteria	Betaproteobacteria	6.54365	64.7	-	FXAH01	49	5860	5675	4/19/17	4/22/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06295900	GCA_900177465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/465/GCA_900177465.1_IMG-taxon_2708742541_annotated_assembly	-	Ballard 720
Proteobacteria bacterium ST_bin11	1978759	PRJNA315256	315256	Proteobacteria	unclassified Proteobacteria	4.91749	50.4	-	MSXO01	88	4477	4311	4/10/17	4/24/17	Scaffold	The University Hong Kong	SAMN06189373	GCA_002083615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/615/GCA_002083615.1_ASM208361v1	28390307	-
Candidatus Gastranaerophilales bacterium HUM_20	1916232	PRJNA348149	348149	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.84889	33.7	-	DABR01	237	1969	1919	4/21/17	9/29/17	Scaffold	University of Queensland	SAMN05904591	GCA_002102645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/645/GCA_002102645.1_ASM210264v1	28360330	-
Candidatus Gastranaerophilales bacterium HUM_8	1916230	PRJNA348149	348149	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.11606	35.1	-	DABF01	47	2175	2091	4/21/17	9/29/17	Scaffold	University of Queensland	SAMN05904579	GCA_002102725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/725/GCA_002102725.1_ASM210272v1	28360330	-
Candidatus Gastranaerophilales bacterium HUM_18	1916231	PRJNA348149	348149	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.73572	34.7	-	DABP01	116	2897	2674	4/21/17	9/29/17	Scaffold	University of Queensland	SAMN05904589	GCA_002102715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/715/GCA_002102715.1_ASM210271v1	28360330	-
Candidatus Gastranaerophilales bacterium HUM_7	1916228	PRJNA348149	348149	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.93001	32.2	-	DABE01	48	1950	1883	4/21/17	9/29/17	Scaffold	University of Queensland	SAMN05904578	GCA_002102735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/735/GCA_002102735.1_ASM210273v1	28360330	-
Candidatus Gastranaerophilales bacterium HUM_10	1916229	PRJNA348149	348149	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.47672	34.9	-	DABH01	85	2539	2438	4/21/17	9/29/17	Scaffold	University of Queensland	SAMN05904581	GCA_002102745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/745/GCA_002102745.1_ASM210274v1	28360330	-
Candidatus Gastranaerophilales bacterium HUM_14	1916227	PRJNA348149	348149	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.75579	32.1	-	DABL01	60	1789	1729	4/21/17	9/29/17	Scaffold	University of Queensland	SAMN05904585	GCA_002102795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/795/GCA_002102795.1_ASM210279v1	28360330	-
Candidatus Gastranaerophilales bacterium HUM_15	1916224	PRJNA348149	348149	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.10137	35.2	-	DABM01	49	2140	2074	4/21/17	9/29/17	Scaffold	University of Queensland	SAMN05904586	GCA_002102815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/815/GCA_002102815.1_ASM210281v1	28360330	-
Candidatus Gastranaerophilales bacterium HUM_6	1916226	PRJNA348149	348149	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.82653	32.2	-	DABD01	52	1852	1786	4/21/17	9/29/17	Scaffold	University of Queensland	SAMN05904577	GCA_002102805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/805/GCA_002102805.1_ASM210280v1	28360330	-
Candidatus Gastranaerophilales bacterium HUM_12	1916225	PRJNA348149	348149	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.85767	32.2	-	DABJ01	56	1872	1796	4/21/17	9/29/17	Scaffold	University of Queensland	SAMN05904583	GCA_002102825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/825/GCA_002102825.1_ASM210282v1	28360330	-
Candidatus Gastranaerophilales bacterium HUM_16	1916223	PRJNA348149	348149	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.02266	35.2	-	DABN01	44	2018	1956	4/21/17	9/29/17	Scaffold	University of Queensland	SAMN05904587	GCA_002102885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/885/GCA_002102885.1_ASM210288v1	28360330	-
Candidatus Gastranaerophilales bacterium HUM_13	1916221	PRJNA348149	348149	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.12819	35.4	-	DABK01	83	2151	2079	4/21/17	9/29/17	Scaffold	University of Queensland	SAMN05904584	GCA_002102875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/875/GCA_002102875.1_ASM210287v1	28360330	-
Candidatus Gastranaerophilales bacterium HUM_23	1916222	PRJNA348149	348149	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.93667	34.8	-	DABU01	26	1934	1885	4/21/17	9/29/17	Scaffold	University of Queensland	SAMN05904594	GCA_002102895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/895/GCA_002102895.1_ASM210289v1	28360330	-
Candidatus Gastranaerophilales bacterium HUM_17	1916220	PRJNA348149	348149	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.28262	34.8	-	DABO01	259	2387	2311	4/21/17	9/29/17	Scaffold	University of Queensland	SAMN05904588	GCA_002102905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/905/GCA_002102905.1_ASM210290v1	28360330	-
Candidatus Gastranaerophilales bacterium HUM_19	1916219	PRJNA348149	348149	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.11057	34.6	-	DABQ01	151	2217	2145	4/21/17	9/29/17	Scaffold	University of Queensland	SAMN05904590	GCA_002102955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/955/GCA_002102955.1_ASM210295v1	28360330	-
Candidatus Gastranaerophilales bacterium HUM_3	1916217	PRJNA348149	348149	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.17337	35.2	-	DABA01	48	2172	2115	4/21/17	9/29/17	Contig	University of Queensland	SAMN05904574	GCA_002102975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/975/GCA_002102975.1_ASM210297v1	28360330	-
Candidatus Gastranaerophilales bacterium HUM_4	1916218	PRJNA348149	348149	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.27723	35.1	-	DABB01	39	2307	2243	4/21/17	9/29/17	Scaffold	University of Queensland	SAMN05904575	GCA_002102985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/985/GCA_002102985.1_ASM210298v1	28360330	-
Candidatus Gastranaerophilales bacterium HUM_11	1916216	PRJNA348149	348149	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.26277	35.3	-	DABI01	113	2335	2247	4/21/17	9/29/17	Scaffold	University of Queensland	SAMN05904582	GCA_002102995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/995/GCA_002102995.1_ASM210299v1	28360330	-
Candidatus Gastranaerophilales bacterium HUM_22	1916215	PRJNA348149	348149	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.85068	35.5	-	DABT01	97	1853	1797	4/21/17	9/29/17	Scaffold	University of Queensland	SAMN05904593	GCA_002103035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/035/GCA_002103035.1_ASM210303v1	28360330	-
Candidatus Gastranaerophilales bacterium HUM_2	1916214	PRJNA348149	348149	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.89399	32.8	-	DAAZ01	49	1901	1847	4/21/17	9/29/17	Scaffold	University of Queensland	SAMN05904571	GCA_002103055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/055/GCA_002103055.1_ASM210305v1	28360330	-
Candidatus Gastranaerophilales bacterium HUM_9	1916320	PRJNA348149	348149	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.85915	31.9	-	DABG01	20	1691	1642	4/21/17	9/29/17	Contig	University of Queensland	SAMN05904580	GCA_002103075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/075/GCA_002103075.1_ASM210307v1	28360330	-
Candidatus Gastranaerophilales bacterium HUM_5	1916321	PRJNA348149	348149	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.27329	35.2	-	DABC01	34	2293	2234	4/21/17	9/29/17	Scaffold	University of Queensland	SAMN05904576	GCA_002103085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/085/GCA_002103085.1_ASM210308v1	28360330	-
Candidatus Gastranaerophilales bacterium HUM_1	1916322	PRJNA348149	348149	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.88128	32.1	-	DAAY01	8	1830	1782	4/21/17	9/29/17	Scaffold	University of Queensland	SAMN05904540	GCA_002103105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/105/GCA_002103105.1_ASM210310v1	28360330	-
Candidatus Gastranaerophilales bacterium HUM_21	1916319	PRJNA348149	348149	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.85131	36.7	-	DABS01	225	2072	1863	4/21/17	9/29/17	Scaffold	University of Queensland	SAMN05904592	GCA_002103135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/135/GCA_002103135.1_ASM210313v1	28360330	-
Colwellia mytili	1888913	PRJNA381102	381102	Proteobacteria	Gammaproteobacteria	4.51166	38.1	-	NBOF01	47	3969	3853	4/21/17	4/24/17	Scaffold	"Third Institute Of Oceanography,State Oceanic Administration"	SAMN06670374	GCA_002104475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/475/GCA_002104475.1_ASM210447v1	-	KCTC 52417
Colwellia polaris	326537	PRJNA380006	380006	Proteobacteria	Gammaproteobacteria	4.42914	37.5	-	NBOE01	28	3820	3686	4/21/17	4/24/17	Scaffold	"Third Institute Of Oceanography,State Oceanic Administration"	SAMN06626649	GCA_002104515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/515/GCA_002104515.1_ASM210451v1	-	MCCC1C00015
Colwellia sediminilitoris	1820336	PRJNA381102	381102	Proteobacteria	Gammaproteobacteria	3.84988	38.3	-	NBOG01	34	3360	3251	4/21/17	4/24/17	Scaffold	"Third Institute Of Oceanography,State Oceanic Administration"	SAMN06670373	GCA_002104535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/535/GCA_002104535.1_ASM210453v1	-	KCTC 52213
Mycobacterium koreense	1069220	PRJNA354248	354248	Terrabacteria group	Actinobacteria	4.0789	69.4	-	NCXO01	129	4015	3816	4/21/17	4/24/17	Contig	San Raffaele Scientific Institute	SAMN06651658	GCA_002104795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/795/GCA_002104795.1_ASM210479v1	-	KCTC 19819
Derxia lacustris	764842	PRJNA358212	358212	Proteobacteria	Betaproteobacteria	5.47046	69.1	-	MUHU01	58	4666	4497	4/21/17	4/24/17	Contig	Nucleus of Nitrogen Fixation	SAMN06167564	GCA_002105195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/195/GCA_002105195.1_ASM210519v1	-	HL-12
Proteobacteria bacterium ST_bin12	1978760	PRJNA315256	315256	Proteobacteria	unclassified Proteobacteria	2.30831	42.2	-	MSXP01	10	2250	2173	4/10/17	4/24/17	Scaffold	The University Hong Kong	SAMN06189372	GCA_002083635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/635/GCA_002083635.1_ASM208363v1	28390307	-
Proteobacteria bacterium ST_bin13	1978761	PRJNA315256	315256	Proteobacteria	unclassified Proteobacteria	3.60478	61.8	-	MSXQ01	41	3615	3520	4/10/17	4/24/17	Scaffold	The University Hong Kong	SAMN06189371	GCA_002083645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/645/GCA_002083645.1_ASM208364v1	28390307	-
Proteobacteria bacterium ST_bin14	1978762	PRJNA315256	315256	Proteobacteria	unclassified Proteobacteria	3.04813	61.4	-	MSXR01	33	2996	2911	4/10/17	4/24/17	Scaffold	The University Hong Kong	SAMN06189370	GCA_002083655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/655/GCA_002083655.1_ASM208365v1	28390307	-
Proteobacteria bacterium ST_bin15	1978763	PRJNA315256	315256	Proteobacteria	unclassified Proteobacteria	2.88046	60.7	-	MSXS01	86	2820	2705	4/10/17	4/24/17	Scaffold	The University Hong Kong	SAMN06189369	GCA_002083695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/695/GCA_002083695.1_ASM208369v1	28390307	-
Caulobacteraceae bacterium TH1-2	1978549	PRJNA382246	382246	Proteobacteria	Alphaproteobacteria	3.73848	55.7	-	NCSQ01	174	3500	3373	4/24/17	4/26/17	Contig	Nanjing Institute of Geography and Limnology	SAMN06702727	GCA_002105465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/465/GCA_002105465.1_ASM210546v1	-	TH1-2
Klebsiella pneumoniae UHKPC07	1284804	PRJNA187296	187296	Proteobacteria	Gammaproteobacteria	5.52378	57.3213	chromosome:NZ_CP011985.1/CP011985.1; plasmid pUHKPC07-113.639kb:NZ_CP011986.1/CP011986.1; plasmid pUHKPC07-13.841kb:NZ_CP011988.1/CP011988.1; plasmid pUHKPC07-74.026kb:NZ_CP011987.1/CP011987.1	-	4	5616	5380	7/23/15	2/21/17	Complete Genome	JCVI	SAMN02141972	GCA_000417265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/265/GCA_000417265.2_ASM41726v2	-	UHKPC07
Klebsiella pneumoniae subsp. pneumoniae KPR0928	1328325	PRJNA198784	198784	Proteobacteria	Gammaproteobacteria	5.43679	57.3174	chromosome:NZ_CP008831.1/CP008831.1; plasmid pKPN-294:NZ_CP008832.1/CP008832.1; plasmid pKpQIL-531:NZ_CP008833.1/CP008833.1	-	3	5513	5286	7/2/14	2/21/17	Complete Genome	NISC	SAMN02786856	GCA_000717515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/515/GCA_000717515.1_ASM71751v1	-	KPR0928
Neisseria canis	493	PRJNA359492	359492	Proteobacteria	Betaproteobacteria	2.52905	49.7	-	MTBL01	131	2422	2247	4/24/17	4/26/17	Contig	Wadsworth Center / NYSDOH	SAMN06212706	GCA_002108495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/495/GCA_002108495.1_ASM210849v1	-	ATCC 14687
Neisseria zoodegmatis	326523	PRJNA359492	359492	Proteobacteria	Betaproteobacteria	2.53639	50.9	-	MTBM01	87	2417	2283	4/24/17	4/26/17	Contig	Wadsworth Center / NYSDOH	SAMN06212709	GCA_002108575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/575/GCA_002108575.1_ASM210857v1	-	DSM 21643
Agreia pratensis	150121	PRJEB20264	381725	Terrabacteria group	Actinobacteria	3.58269	65.4	-	FXAY01	10	3448	3366	4/20/17	5/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06296010	GCA_900177685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/685/GCA_900177685.1_IMG-taxon_2708742395_annotated_assembly	-	VKM Ac-2510
Paraburkholderia susongensis	1515439	PRJEB20282	381727	Proteobacteria	Betaproteobacteria	7.719	63.3	-	FXAT01	33	6903	6668	4/20/17	5/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06265784	GCA_900177725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/725/GCA_900177725.1_IMG-taxon_2708742529_annotated_assembly	-	LMG 29540
Corynebacterium pollutisoli	1610489	PRJEB20263	381724	Terrabacteria group	Actinobacteria	2.54085	68.5	-	FXAR01	15	2504	2402	4/20/17	5/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06295981	GCA_900177745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/745/GCA_900177745.1_IMG-taxon_2708742385_annotated_assembly	-	VDS
Arenibacter troitsensis	188872	PRJEB20273	381732	FCB group	Bacteroidetes/Chlorobi group	5.2876	39.6	-	FXAO01	26	4346	4259	4/20/17	5/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03080602	GCA_900177645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/645/GCA_900177645.1_IMG-taxon_2595699007_annotated_assembly	-	DSM 19835
Dethiosulfovibrio salsuginis	561720	PRJEB20281	381726	Synergistetes	Synergistia	2.68432	53.7	-	FXBB01	68	2588	2446	4/20/17	5/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06275492	GCA_900177735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/735/GCA_900177735.1_IMG-taxon_2671180116_annotated_assembly	-	USBA 82
Sphingobacterium psychroaquaticum	561061	PRJEB20271	381734	FCB group	Bacteroidetes/Chlorobi group	4.50611	41.5	-	FXAU01	14	3802	3702	4/20/17	5/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660862	GCA_900177625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/625/GCA_900177625.1_IMG-taxon_2595699002_annotated_assembly	-	DSM 22418
Marivirga sericea	1028	PRJEB20272	381731	FCB group	Bacteroidetes/Chlorobi group	4.74101	36	-	FXAW01	26	4066	3971	4/20/17	5/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05661096	GCA_900177665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/665/GCA_900177665.1_IMG-taxon_2595699006_annotated_assembly	-	DSM 4125
Tuberibacillus sp. Marseille-P3662	1965358	PRJEB20477	383519	Terrabacteria group	Firmicutes	3.67591	41.7	-	FXBS01	6	3719	3586	4/21/17	5/1/17	Contig	URMITE	SAMEA103981411	GCA_900178005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/005/GCA_900178005.1_PRJEB20477	-	Marseille-P3662
Massilibacteroides vaginae	1673718	PRJEB20505	383822	FCB group	Bacteroidetes/Chlorobi group	3.71032	40.1	-	FXDJ01	9	3032	2935	4/22/17	9/18/17	Contig	URMITE	SAMEA103984634	GCA_900178525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/525/GCA_900178525.1_PRJEB20505	-	MV12
Actinomyces succiniciruminis	1522002	PRJEB6322	358497	Terrabacteria group	Actinobacteria	3.3367	69.2	-	-	91	2912	2861	-	-	Scaffold	WUR	SAMEA2537693	GCA_900002405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/002/405/GCA_900002405.1_AAM4	-	AM4
Xuhuaishuia manganoxidans	1411903	PRJNA360339	360339	Proteobacteria	Alphaproteobacteria	3.4535	66.4828	chromosome:NZ_CP019124.1/CP019124.1	-	19	3257	3160	1/26/17	4/17/17	Chromosome	Ocean University of China	SAMN06209184	GCA_001981245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/245/GCA_001981245.1_ASM198124v1	-	DY6-4
Xanthomonas phaseoli pv. dieffenbachiae LMG 695	1437877	PRJNA232101	232101	Proteobacteria	Gammaproteobacteria	5.03684	64.9	chromosome:NZ_CP014347.1/CP014347.1	-	1	4437	4014	2/22/16	4/11/17	Chromosome	CIRAD	SAMN04481176	GCA_001564415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/415/GCA_001564415.1_ASM156441v1	-	LMG 695
Marivita cryptomonadis	505252	PRJNA239928	239928	Proteobacteria	Alphaproteobacteria	4.61038	59	-	JFKD01	115	4476	4325	4/28/17	5/3/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02671737	GCA_002115725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/725/GCA_002115725.1_ASM211572v1	-	CL-SK44
Thalassospira mesophila	1293891	PRJNA239936	239936	Proteobacteria	Alphaproteobacteria	4.94065	54.3	-	JFKA01	94	4384	4284	4/28/17	5/3/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02671744	GCA_002115755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/755/GCA_002115755.1_ASM211575v1	-	JCM 18969
Marivita geojedonensis	1123756	PRJNA239932	239932	Proteobacteria	Alphaproteobacteria	4.31317	60	-	JFKC01	73	4201	4090	4/28/17	5/3/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02671740	GCA_002115805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/805/GCA_002115805.1_ASM211580v1	-	DPG-138
Thalassospira alkalitolerans	1293890	PRJNA239934	239934	Proteobacteria	Alphaproteobacteria	4.78895	53.1	-	JFKB01	72	4367	4272	4/28/17	5/3/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02671741	GCA_002115745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/745/GCA_002115745.1_ASM211574v1	-	JCM 18968
Klebsiella pneumoniae	573	PRJNA330755	330755	Proteobacteria	Gammaproteobacteria	5.5874	57.3144	chromosome:NZ_CP016814.1/CP016814.1; plasmid unamed:NZ_CP016815.1/CP016815.1	-	2	5560	5272	8/19/16	2/21/17	Complete Genome	National Kaohsiung Normal University	SAMN05425526	GCA_001708225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/225/GCA_001708225.1_ASM170822v1	-	ED23
Thermogutta terrifontis	1331910	PRJNA354233	354233	PVC group	Planctomycetes	4.81075	57.3	chromosome:NZ_CP018477.1/CP018477.1	-	1	3555	3469	8/30/17	9/1/17	Complete Genome	Hotzyme	SAMN06043589	GCA_002277955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/955/GCA_002277955.1_ASM227795v1	-	R1
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA295651	295651	Proteobacteria	Gammaproteobacteria	5.35546	57.3	chromosome:NZ_CP012744.1/CP012744.1	-	1	5446	5128	4/5/16	2/21/17	Complete Genome	RGNOSIS	SAMN04087462	GCA_001611095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/095/GCA_001611095.1_ASM161109v1	26968884	TGH10
Enterobacter lignolyticus	1334193	PRJNA297567	297567	Proteobacteria	Gammaproteobacteria	4.70295	57.3	chromosome:NZ_CP012871.1/CP012871.1	-	1	4505	4311	12/7/15	4/17/17	Complete Genome	University of Malaya	SAMN04074888	GCA_001461805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/461/805/GCA_001461805.1_ASM146180v1	-	G5
Nonlabens spongiae	331648	PRJNA355354	355354	FCB group	Bacteroidetes/Chlorobi group	3.39333	40.388	chromosome:NZ_CP019344.1/CP019344.1; plasmid unnamed1:NZ_CP019345.1/CP019345.1	-	2	3129	3026	5/2/17	5/6/17	Chromosome	"Atmosphere and Ocean Research Institute, The University of Tokyo"	SAMN06075354	GCA_002117125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/125/GCA_002117125.1_ASM211712v1	-	JCM 13191
Klebsiella pneumoniae	573	PRJDB4172	293526	Proteobacteria	Gammaproteobacteria	5.52032	57.3	chromosome Unknown:NZ_AP014950.1/AP014950.1	-	1	5447	5194	9/15/15	2/21/17	Complete Genome	The Jikei University School of Medicine	SAMD00039249	GCA_001548315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/315/GCA_001548315.1_ASM154831v1	-	YH43
Hymenobacter sp. DG25A	1385663	PRJNA293647	293647	FCB group	Bacteroidetes/Chlorobi group	3.77714	57.3	chromosome:NZ_CP012623.1/CP012623.1	-	1	3260	3181	9/9/15	4/11/17	Complete Genome	Seoul Women's University	SAMN04009128	GCA_001280305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/305/GCA_001280305.1_ASM128030v1	-	DG25A
Candidatus Filomicrobium marinum	1608628	PRJEB8348	275220	Proteobacteria	Alphaproteobacteria	3.96994	57.3	chromosome 1:NZ_LN829119.1/LN829119.1	-	1	3683	3600	3/24/15	4/10/17	Complete Genome	IINFACTS	SAMEA3234137	GCA_000981545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/545/GCA_000981545.1_Y1	25953167	Y
Oceanobacillus senegalensis	1936063	PRJEB20397	382657	Terrabacteria group	Firmicutes	4.30037	37.1	-	FWYO01	4	4117	3761	4/25/17	5/19/17	Scaffold	URMITE	SAMEA103975582	GCA_900176885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/885/GCA_900176885.1_PRJEB20397	-	Marseille-P3587
Corynebacterium fournierii	1852390	PRJEB20393	382656	Terrabacteria group	Actinobacteria	2.38444	64.9	-	FWYQ01	24	2345	2100	4/25/17	5/18/17	Scaffold	URMITE	SAMEA103975581	GCA_900176865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/865/GCA_900176865.1_PRJEB20393	-	Marseille-P2948
Enterobacter muelleri	1646339	PRJEB20384	382655	Proteobacteria	Gammaproteobacteria	4.69568	55.9	-	FXLQ01	66	4578	4386	4/26/17	5/6/17	Contig	JUSTUS LIEBIG UNIVERSITY	SAMEA103972944	GCA_900180435.1	-	-	-	-
Clostridiales bacterium Marseille-P2986	1852391	PRJEB20365	382519	Terrabacteria group	Firmicutes	1.87368	34.7	-	FWYJ01	15	1897	1792	4/26/17	5/6/17	Scaffold	URMITE	SAMEA103970041	GCA_900176625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/625/GCA_900176625.1_PRJEB20365	-	Marseille-P2986
Clostridium merdae	1958780	PRJEB20369	382517	Terrabacteria group	Firmicutes	2.74886	45.3	-	FXLN01	4	2682	2594	4/26/17	5/6/17	Contig	URMITE	SAMEA103970044	GCA_900176635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/635/GCA_900176635.1_PRJEB20369	-	Marseille-P2953
Clostridium massiliodielmoense	1776385	PRJEB20368	382516	Terrabacteria group	Firmicutes	2.75934	28.4	-	FXLO01	9	2722	2573	4/26/17	5/6/17	Contig	URMITE	SAMEA103970043	GCA_900176615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/615/GCA_900176615.1_PRJEB20368	-	MT26
Loktanella soesokkakensis	1343159	PRJEB19737	384757	Proteobacteria	Alphaproteobacteria	3.93669	67	-	FWFY01	43	3709	3586	4/28/17	5/6/17	Contig	UVEG	SAMEA102341668	GCA_900172345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/345/GCA_900172345.1_L.soesokkakensis_CECT8376_Spades_Prokka	-	CECT 8367
Ruegeria meonggei	1446476	PRJEB19742	384746	Proteobacteria	Alphaproteobacteria	4.54307	57.3	-	FWFP01	33	4474	4352	4/28/17	5/6/17	Contig	UVEG	SAMEA102343918	GCA_900172215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/215/GCA_900172215.1_R.meonggei_CECT8411_Spades_Prokka	-	CECT 8411
Roseivivax jejudonensis	1529041	PRJEB19744	384748	Proteobacteria	Alphaproteobacteria	4.31287	68	-	FWFK01	21	4089	3995	4/28/17	5/6/17	Contig	UVEG	SAMEA102345418	GCA_900172265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/265/GCA_900172265.1_R.jejudonensis_CECT8625_Spades_Prokka	-	CECT 8625
Pseudooctadecabacter jejudonensis	1391910	PRJEB19739	384749	Proteobacteria	Alphaproteobacteria	3.41263	59.6	-	FWFT01	15	3346	3268	4/28/17	5/6/17	Contig	UVEG	SAMEA102343168	GCA_900172275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/275/GCA_900172275.1_P.jejudonensis_CECT8397_Spades_Prokka	-	CECT 8397
Roseisalinus antarcticus	254357	PRJEB19726	384762	Proteobacteria	Alphaproteobacteria	5.00312	66.7	-	FWFZ01	156	4700	4439	4/28/17	5/6/17	Contig	UVEG	SAMEA102065668	GCA_900172355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/355/GCA_900172355.1_R.antarcticus_CECT7023_Spades_Prokka	-	CECT 7023
Oceanibacterium hippocampi	745714	PRJEB19731	384751	Proteobacteria	Alphaproteobacteria	4.83344	66.7	-	FWFR01	18	4553	4463	4/28/17	5/6/17	Contig	UVEG	SAMEA102070168	GCA_900172325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/325/GCA_900172325.1_O.hippocampi_CECT7691_Spades_Prokka	-	CECT 7691
Roseovarius aestuarii	475083	PRJEB19732	384752	Proteobacteria	Alphaproteobacteria	4.81024	57.9	-	FWXB01	82	4613	4481	4/28/17	5/6/17	Contig	UVEG	SAMEA102070918	GCA_900172285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/285/GCA_900172285.1_R.aestuarii_CECT7745_Spades_Prokka	-	CECT 7745
Pseudooceanicola marinus	396013	PRJEB19733	384753	Proteobacteria	Alphaproteobacteria	4.53314	66.8	-	FWFN01	34	4252	4144	4/28/17	5/6/17	Contig	UVEG	SAMEA102123418	GCA_900172385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/385/GCA_900172385.1_Ps.marinus_CECT7751_Spades_Prokka	-	CECT 7751
Pelagicola litorisediminis	1312363	PRJEB19736	384756	Proteobacteria	Alphaproteobacteria	3.99874	57.1	-	FWFL01	39	3935	3821	4/28/17	5/6/17	Contig	UVEG	SAMEA102326668	GCA_900172295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/295/GCA_900172295.1_P.litorisediminis_CECT8287_Spades_Prokka	-	CECT 8287
Aquimixticola soesokkakensis	1519096	PRJEB19743	384747	Proteobacteria	Alphaproteobacteria	3.49075	61.4	-	FWFS01	32	3341	3251	4/28/17	5/6/17	Contig	UVEG	SAMEA102344668	GCA_900172375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/375/GCA_900172375.1_A.soesokkakensis_CECT8620_Spades_Prokka	-	CECT 8620
Roseovarius halotolerans	505353	PRJEB19735	384755	Proteobacteria	Alphaproteobacteria	3.72554	63.8	-	FWFU01	14	3672	3588	4/28/17	5/6/17	Contig	UVEG	SAMEA102125668	GCA_900172255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/255/GCA_900172255.1_R.halotolerans_CECT8110_Spades_Prokka	-	CECT 8110
Roseovarius albus	1247867	PRJEB19728	384759	Proteobacteria	Alphaproteobacteria	4.28784	54.3	-	FWFX01	39	4134	4056	4/28/17	5/6/17	Contig	UVEG	SAMEA102067168	GCA_900172335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/335/GCA_900172335.1_R.albus_CECT7450_Spades_Prokka	-	CECT 7450
Roseovarius gaetbuli	1356575	PRJEB19738	384758	Proteobacteria	Alphaproteobacteria	4.1304	60.4	-	FWFJ01	144	3985	3781	4/28/17	5/6/17	Contig	UVEG	SAMEA102342418	GCA_900172365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/365/GCA_900172365.1_R.gaetbulli_CECT8370_Spades_Prokka	-	CECT 8370
Pseudoruegeria aquimaris	393663	PRJEB19730	384750	Proteobacteria	Alphaproteobacteria	3.69101	66.7	-	FWFQ01	60	3680	3545	4/28/17	5/6/17	Contig	UVEG	SAMEA102067918	GCA_900172235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/235/GCA_900172235.1_Ps.aquimaris_CECT7680_Spades_Prokka	-	CECT 7680
Candidatus Filomicrobium marinum	1608628	PRJEB8348	275220	Proteobacteria	Alphaproteobacteria	3.96994	57.3	chromosome 1:NZ_LN829118.1/LN829118.1	-	1	3681	3598	3/21/15	4/10/17	Complete Genome	IINFACTS	SAMEA3234138	GCA_000981565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/565/GCA_000981565.1_W1	25953167	strain W
Geobacter pelophilus	60036	PRJDB5639	384866	Proteobacteria	delta/epsilon subdivisions	4.338	60.9	-	BDQG01	2	3803	3677	4/28/17	5/6/17	Scaffold	"Environmental Microbiology Research Group, National Institute of Advanced Industrial Science and Technology (AIST), Environmental Management Research Institute"	SAMD00076870	GCA_002117975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/975/GCA_002117975.1_ASM211797v1	-	Drf2
Entomoplasmatales bacterium EntAcro1	1941207	PRJNA369645	369645	Terrabacteria group	Tenericutes	1.02285	35	-	MVYU01	208	1036	983	5/5/17	5/5/17	Contig	Centre for Social Evolution	SAMN06251630	GCA_002118325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/118/325/GCA_002118325.1_EntAcro1	-	-
Entomoplasmatales bacterium EntAcro10	1941208	PRJNA369645	369645	Terrabacteria group	Tenericutes	1.38118	30.3	-	MVYV01	306	1173	1107	5/5/17	5/5/17	Contig	Centre for Social Evolution	SAMN06251631	GCA_002118355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/118/355/GCA_002118355.1_EntAcro10	-	-
Streptomyces platensis	58346	PRJNA341445	341445	Terrabacteria group	Actinobacteria	8.40048	71.2	-	MIGA01	126	7367	6949	5/8/17	5/10/17	Contig	Fraunhofer Institute for Interfacial Engineering and Biotechnolgy IGB	SAMN05722965	GCA_002119195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/195/GCA_002119195.1_ASM211919v1	-	DSM 40041
Oleibacter sp. HI0075	1822250	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	6.11856	51.5	-	LWFP01	2573	5592	4668	5/2/16	5/2/16	Contig	Massachusetts Institute of Technology	SAMN04580789	GCA_001635005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/005/GCA_001635005.1_ASM163500v1	-	HI0075
Provencibacterium massiliense	1841868	PRJEB19965	379099	Terrabacteria group	Firmicutes	3.08423	59.8	-	FWCH01	12	2951	2846	3/14/17	3/18/17	Contig	URMITE	SAMEA103910483	GCA_900169495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/495/GCA_900169495.1_PRJEB19965	-	Marseille-P2780
Desulfurella amilsii	1562698	PRJNA336485	336485	Proteobacteria	delta/epsilon subdivisions	2.00278	34	-	MDSU01	20	2073	1982	5/1/17	5/22/17	Contig	Wageningen University	SAMN05511439	GCA_002119425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/425/GCA_002119425.1_ASM211942v1	28265263	TR1
Brucella suis	29461	PRJNA243997	243997	Proteobacteria	Alphaproteobacteria	3.49328	57.3	chromosome 1:CP009096.1; chromosome 2:CP009097.1	-	2	3248	3124	9/16/14	10/30/14	Complete Genome	University of Pretoria	SAMN02942803	GCA_000755085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/085/GCA_000755085.1_ASM75508v1	-	ZW046
Brucella suis	29461	PRJNA243997	243997	Proteobacteria	Alphaproteobacteria	3.44086	57.3	chromosome 1:CP009094.1; chromosome 2:CP009095.1	-	2	3216	3090	9/16/14	10/30/14	Complete Genome	University of Pretoria	SAMN02942801	GCA_000755105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/105/GCA_000755105.1_ASM75510v1	-	ZW043
Terriglobus saanensis SP1PR4	401053	PRJNA48971	48971	Acidobacteria	Acidobacteriia	5.09523	57.3	chromosome:NC_014963.1/CP002467.1	-	1	4274	4182	1/24/11	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00100755	GCA_000179915.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/915/GCA_000179915.2_ASM17991v2	23450133	SP1PR4
Chlorobium luteolum DSM 273	319225	PRJNA13012	13012	FCB group	Bacteroidetes/Chlorobi group	2.36484	57.3	chromosome:NC_007512.1/CP000096.1	-	1	2256	2125	10/26/05	4/6/17	Complete Genome	DOE Joint Genome Institute	SAMN02598284	GCA_000012485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/485/GCA_000012485.1_ASM1248v1	-	DSM 273
Crenothrix sp. D3	1880899	PRJNA325574	325574	Proteobacteria	Gammaproteobacteria	3.63377	42.2	-	MBQZ01	103	3436	3245	5/12/17	5/12/17	Contig	Max Planck Institute for Marine Microbiology	SAMN05420754	GCA_002134785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/785/GCA_002134785.1_ASM213478v1	28585934	-
Litorilinea aerophila	1204385	PRJNA270866	270866	Terrabacteria group	Chloroflexi	5.81253	64.5	-	JWSX01	2496	5948	5025	5/17/17	5/17/17	Scaffold	California Institute of Technology	SAMN03269976	GCA_002148365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/365/GCA_002148365.1_ASM214836v1	-	PRI-413
Alkalinema sp. CACIAM 70d	1934309	PRJNA361070	361070	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.46103	49.7	-	MUGG01	223	5457	5216	5/18/17	5/18/17	Contig	Universidade Federal do Para	SAMN06220072	GCA_002148405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/405/GCA_002148405.1_ASM214840v1	-	-
Nitrospira cf. moscoviensis SBR1015	96242	PRJEB13176	385582	Nitrospirae	Nitrospira	2.90983	56.5	-	FJVN01	357	3060	2482	5/5/17	5/24/17	Scaffold	THE UNIVERSITY OF HONG KONG	SAMEA3909875	GCA_900078515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/515/GCA_900078515.1_Nitrospira-HN-bin3	-	-
Mycobacterium saskatchewanense	220927	PRJNA299467	299467	Terrabacteria group	Actinobacteria	5.93093	68.3	-	LQPR01	87	5598	5349	4/20/17	4/22/17	Contig	University of Trento	SAMN04216948	GCA_002101875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/875/GCA_002101875.1_ASM210187v1	-	DSM 44616
Mycobacterium palustre	153971	PRJNA299467	299467	Terrabacteria group	Actinobacteria	6.03752	68.5	-	LQPJ01	158	5727	5397	4/20/17	4/22/17	Contig	University of Trento	SAMN04216940	GCA_002101785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/785/GCA_002101785.1_ASM210178v1	-	DSM 44572
Mycobacterium fallax	1793	PRJNA299467	299467	Terrabacteria group	Actinobacteria	4.23245	70.3	-	LQOJ01	84	4049	3875	4/20/17	4/22/17	Contig	University of Trento	SAMN04216925	GCA_002101995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/995/GCA_002101995.1_ASM210199v1	-	DSM 44179
Mycobacterium confluentis	28047	PRJNA299467	299467	Terrabacteria group	Actinobacteria	5.84169	67.5	-	LQOQ01	57	5499	5338	4/20/17	4/22/17	Contig	University of Trento	SAMN04216920	GCA_002102105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/105/GCA_002102105.1_ASM210210v1	-	DSM 44017
Mycobacterium doricum	126673	PRJNA299467	299467	Terrabacteria group	Actinobacteria	3.9521	67.6	-	LQOS01	74	3847	3532	4/20/17	4/22/17	Contig	University of Trento	SAMN04216922	GCA_002102115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/115/GCA_002102115.1_ASM210211v1	-	DSM 44339
Mycobacterium conspicuum	44010	PRJNA299467	299467	Terrabacteria group	Actinobacteria	6.20061	67.4	-	LQOR01	92	5769	5525	4/20/17	4/22/17	Contig	University of Trento	SAMN04216921	GCA_002102095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/095/GCA_002102095.1_ASM210209v1	-	DSM 44136
Mycobacterium riyadhense	486698	PRJNA299467	299467	Terrabacteria group	Actinobacteria	6.26985	65.3	-	LQPQ01	263	5700	5180	4/20/17	4/22/17	Contig	University of Trento	SAMN04216947	GCA_002101845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/845/GCA_002101845.1_ASM210184v1	-	DSM 45176
Mycobacterium fragae	1260918	PRJNA299467	299467	Terrabacteria group	Actinobacteria	4.73105	66	-	LQOW01	35	4557	4411	4/20/17	4/22/17	Contig	University of Trento	SAMN04216927	GCA_002102185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/185/GCA_002102185.1_ASM210218v1	-	DSM 45731
Mycobacterium longobardum	1108812	PRJNA299467	299467	Terrabacteria group	Actinobacteria	4.81225	67.9	-	LQPG01	59	4653	4468	4/20/17	4/22/17	Contig	University of Trento	SAMN04216937	GCA_002102265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/265/GCA_002102265.1_ASM210226v1	-	DSM 45394
Mycobacterium parmense	185642	PRJNA299467	299467	Terrabacteria group	Actinobacteria	5.89174	68.4	-	LQPO01	91	5466	5219	4/20/17	4/22/17	Contig	University of Trento	SAMN04216945	GCA_002102335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/335/GCA_002102335.1_ASM210233v1	-	DSM 44553
Mycobacterium lacus	169765	PRJNA299467	299467	Terrabacteria group	Actinobacteria	4.90529	66.9	-	LQPF01	187	4609	4226	4/20/17	4/22/17	Contig	University of Trento	SAMN04216936	GCA_002102215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/215/GCA_002102215.1_ASM210221v1	-	DSM 44577
Gilliamella mensalis	1908520	PRJEB16314	382899	Proteobacteria	Gammaproteobacteria	2.28181	35.5	-	FMWR01	44	2092	2003	4/14/17	4/22/17	Scaffold	Jessy	SAMEA4516761	GCA_900103085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/085/GCA_900103085.1_LMG29880	-	-
Gilliamella bombi	1908521	PRJEB16314	382899	Proteobacteria	Gammaproteobacteria	2.61698	34.6	-	FMWS01	132	2515	2365	4/14/17	4/22/17	Scaffold	Jessy	SAMEA4516760	GCA_900103255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/255/GCA_900103255.1_LMG29879	-	-
Kocuria indica	1049583	PRJEB20443	382921	Terrabacteria group	Actinobacteria	2.87633	68.9	-	FXAC01	48	2600	2405	4/19/17	4/22/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06296028	GCA_900177335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/335/GCA_900177335.1_IMG-taxon_2708742531_annotated_assembly	-	NIO-1021
Mycobacterium kubicae	120959	PRJNA299467	299467	Terrabacteria group	Actinobacteria	5.83257	66	-	LQPD01	116	5512	5202	4/20/17	4/22/17	Contig	University of Trento	SAMN04216934	GCA_002101745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/745/GCA_002101745.1_ASM210174v1	-	CIP 106428
Mycobacterium senuense	386913	PRJNA299467	299467	Terrabacteria group	Actinobacteria	4.53463	68.7	-	LQPS01	54	4274	4084	4/20/17	4/22/17	Contig	University of Trento	SAMN04216949	GCA_002101885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/885/GCA_002101885.1_ASM210188v1	-	DSM 44999
Mycobacterium terrae	1788	PRJNA299467	299467	Terrabacteria group	Actinobacteria	4.52482	68.4	-	LQPX01	47	4271	4081	4/20/17	4/22/17	Contig	University of Trento	SAMN04216954	GCA_002101955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/955/GCA_002101955.1_ASM210195v1	-	CIP 104321
Mycobacterium salmoniphilum	404941	PRJNA323571	323571	Terrabacteria group	Actinobacteria	4.93402	64	-	MAFE01	16	4914	4718	3/3/17	3/6/17	Contig	LNCC	SAMN05186785	GCA_002013645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/645/GCA_002013645.1_ASM201364v1	-	D16Q15
Pseudobacteriovorax antillogorgiicola	1513793	PRJEB20445	382919	Proteobacteria	Oligoflexia	7.27542	45.9	-	FWZT01	68	6409	6357	4/19/17	4/19/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06296036	GCA_900177345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/345/GCA_900177345.1_IMG-taxon_2708742533_annotated_assembly	-	RKEM611
Tistlia consotensis USBA 355	560819	PRJEB20422	382908	Proteobacteria	Alphaproteobacteria	6.93589	71.5	-	FWZX01	93	6442	6215	4/19/17	4/22/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05428998	GCA_900177295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/295/GCA_900177295.1_IMG-taxon_2667527377_annotated_assembly	-	USBA 355
Neisseria dentiae	194197	PRJNA359492	359492	Proteobacteria	Betaproteobacteria	2.75879	54.4	-	MTBO01	193	2625	2403	4/24/17	4/26/17	Contig	Wadsworth Center / NYSDOH	SAMN06212708	GCA_002108595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/595/GCA_002108595.1_ASM210859v1	-	DSM 19151
Neisseria animaloris	326522	PRJNA359492	359492	Proteobacteria	Betaproteobacteria	2.32554	49.3	-	MTBN01	48	2211	2112	4/24/17	4/26/17	Contig	Wadsworth Center / NYSDOH	SAMN06212707	GCA_002108605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/605/GCA_002108605.1_ASM210860v1	-	DSM 21642
Raoultella sp. YJ	1850565	PRJNA360330	360330	Proteobacteria	Gammaproteobacteria	6.2045	55.1	-	MTEG01	119	6069	5733	4/24/17	4/26/17	Contig	Wenzhou University	SAMN06209158	GCA_002108615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/615/GCA_002108615.1_ASM210861v1	-	YJ
Bacillus tuaregi	1816695	PRJEB16343	349294	Terrabacteria group	Firmicutes	4.86353	39.5	-	FNLH01	16	4732	4496	10/21/16	4/17/17	Scaffold	URMITE	SAMEA4518411	GCA_900104575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/575/GCA_900104575.1_PRJEB16343	-	Marseille-P2489
Magnetofaba australis IT-1	1434232	PRJNA316067	316067	Proteobacteria	Alphaproteobacteria	4.9867	61.3	-	LVJN01	21	4269	4105	4/25/17	4/27/17	Contig	LNCC	SAMN04574817	GCA_002109495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/495/GCA_002109495.1_ASM210949v1	27801294	IT-1
unicellular cyanobacterium SU2	1981054	PRJNA383479	383479	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.2433	38.7	-	NEED01	82	4711	4424	4/25/17	4/27/17	Scaffold	"Department of Ecology, Environment and Plant Sciences, Stockholm University"	SAMN06765959	GCA_002110465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/465/GCA_002110465.1_croco123	-	SU2
Azospirillum oryzae	286727	PRJEB20436	382935	Proteobacteria	Alphaproteobacteria	7.67469	67.6	-	FXAK01	10	6921	6669	4/19/17	4/22/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02982917	GCA_900177515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/515/GCA_900177515.1_IMG-taxon_2622736610_annotated_assembly	-	A2P
Pseudogulbenkiania subflava DSM 22618	1123014	PRJEB20430	382937	Proteobacteria	Betaproteobacteria	4.3674	63.4	-	FXAG01	45	4094	3905	4/19/17	4/22/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745746	GCA_900177275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/275/GCA_900177275.1_IMG-taxon_2568526005_annotated_assembly	-	DSM 22618
Alteromonadaceae bacterium Bs31	1304903	PRJEB20429	382905	Proteobacteria	Gammaproteobacteria	5.01735	47.7	-	FXAI01	46	4308	4152	4/19/17	4/22/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745866	GCA_900177435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/435/GCA_900177435.1_IMG-taxon_2528768159_annotated_assembly	-	Bs31
Sphingomonas indica	941907	PRJEB20448	382925	Proteobacteria	Alphaproteobacteria	2.80735	67	chromosome I:NZ_LT840185.1/LT840185.1	-	1	2766	2689	4/19/17	4/22/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN06295910	GCA_900177405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/405/GCA_900177405.1_IMG-taxon_2708742536_annotated_assembly	-	Dd16
Bacillus filamentosus	1402861	PRJEB20446	382920	Terrabacteria group	Firmicutes	5.14921	36.4	-	FXAJ01	31	5145	4970	4/19/17	4/22/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06296056	GCA_900177535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/535/GCA_900177535.1_IMG-taxon_2708742534_annotated_assembly	-	SGD-14
Anaeromassilibacillus sp. Marseille-P3371	1944639	PRJEB19993	379253	Terrabacteria group	Firmicutes	3.54509	49.1	-	FWDV01	5	2962	2775	3/24/17	5/1/17	Scaffold	URMITE	SAMEA103910976	GCA_900169665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/665/GCA_900169665.1_PRJEB19993	-	Marseille-P3371
Altererythrobacter xiamenensis	1316679	PRJEB20267	381718	Proteobacteria	Alphaproteobacteria	3.08241	61.8	-	FXWG01	5	3010	2933	5/13/17	5/24/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06297468	GCA_900177715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/715/GCA_900177715.1_IMG-taxon_2718218510_annotated_assembly	-	CGMCC 1.12494
Idiomarina planktonica	1323738	PRJEB20266	381723	Proteobacteria	Gammaproteobacteria	2.57494	49	-	FXWH01	5	2436	2377	5/13/17	5/24/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06297229	GCA_900177775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/775/GCA_900177775.1_IMG-taxon_2718218509_annotated_assembly	-	CGMCC 1.12458
Oceanibaculum sp. L54-1-50	1909734	PRJNA348665	348665	Proteobacteria	Alphaproteobacteria	3.8435	65.1	-	MPOB01	40	3669	3539	5/18/17	5/24/17	Contig	State of Oceanic Administration	SAMN05915834	GCA_002148795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/795/GCA_002148795.1_ASM214879v1	-	L54-1-50
Streptomyces swartbergensis	487165	PRJNA386254	386254	Terrabacteria group	Actinobacteria	9.20478	71	-	NGFN01	870	8833	7779	5/18/17	5/24/17	Scaffold	Cape Peninsula University of Technology	SAMN06928588	GCA_002148965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/965/GCA_002148965.1_ASM214896v1	-	HMC13
Gordonia lacunae	417102	PRJNA386254	386254	Terrabacteria group	Actinobacteria	5.75642	68.1	-	NGFO01	90	5241	5048	5/18/17	5/24/17	Contig	Cape Peninsula University of Technology	SAMN06928587	GCA_002149015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/149/015/GCA_002149015.1_ASM214901v1	-	BS2
Streptosporangium sp. M26	569862	PRJNA386254	386254	Terrabacteria group	Actinobacteria	9.58119	70.8	-	NGFP01	549	8813	8073	5/18/17	5/24/17	Scaffold	Cape Peninsula University of Technology	SAMN06928586	GCA_002149035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/149/035/GCA_002149035.1_ASM214903v1	-	M26
Thioflexothrix psekupsii	1570016	PRJNA358584	358584	Proteobacteria	Gammaproteobacteria	3.96826	42.1	-	MSLT01	27	3424	3274	5/19/17	5/24/17	Contig	New England Biolabs	SAMN06175409	GCA_002149925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/149/925/GCA_002149925.1_ASM214992v1	-	D3
Novosphingobium panipatense	428991	PRJNA358440	358440	Proteobacteria	Alphaproteobacteria	5.73512	64.7	-	MSQB01	99	5176	4976	5/19/17	5/24/17	Scaffold	North-Eastern Hill University	SAMN06174115	GCA_002149965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/149/965/GCA_002149965.1_ASM214996v1	-	P5:ABC
Rhodobacteraceae bacterium MCCC 1A06712	1930667	PRJNA359125	359125	Proteobacteria	Alphaproteobacteria	3.07212	54.6	-	MSPP01	12	3050	2980	5/19/17	9/4/17	Contig	The Third Institute of State Oceanic Administration	SAMN06184412	GCA_002150005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/005/GCA_002150005.2_ASM215000v2	-	MCCC 1A06712
Algoriphagus ratkowskyi	57028	PRJNA359502	359502	FCB group	Bacteroidetes/Chlorobi group	4.98453	39.4	-	MSSV01	54	4226	4114	5/19/17	5/24/17	Contig	Shandong Uniwersity at Weihai	SAMN06192697	GCA_002150505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/505/GCA_002150505.1_ASM215050v1	-	DSM 22686
Algoriphagus antarcticus	238540	PRJNA359511	359511	FCB group	Bacteroidetes/Chlorobi group	5.88318	40.4	-	MSSW01	136	4979	4777	5/19/17	5/24/17	Contig	Shandong Uniwersity at Weihai	SAMN06192698	GCA_002150685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/685/GCA_002150685.1_ASM215068v1	-	DSM 15986
Streptomyces africanus	231024	PRJNA293375	293375	Terrabacteria group	Actinobacteria	9.11557	71.2	-	MUKA01	736	8558	7697	5/19/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06271532	GCA_002150735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/735/GCA_002150735.1_ASM215073v1	-	NRRL B-24243
Lentzea kentuckyensis	360086	PRJNA369760	369760	Terrabacteria group	Actinobacteria	10.2106	68.8	-	MUYM01	261	9305	8906	5/19/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06294978	GCA_002150765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/765/GCA_002150765.1_ASM215076v1	-	NRRL B-24416
Streptomyces alboverticillatus	173770	PRJNA293375	293375	Terrabacteria group	Actinobacteria	7.04438	72	-	MUFU01	852	6444	5670	5/19/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06271534	GCA_002150845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/845/GCA_002150845.1_ASM215084v1	-	NRRL B-24281
Klebsiella pneumoniae 500_1420	1304922	PRJNA193167	193167	Proteobacteria	Gammaproteobacteria	5.54764	57.2924	chromosome:NZ_CP011980.1/CP011980.1; plasmid p500_1420-13.838kb:NZ_CP011984.1/CP011984.1; plasmid p500_1420-130.552kb:NZ_CP011981.1/CP011981.1; plasmid p500_1420-43.380kb:NZ_CP011983.1/CP011983.1; plasmid p500_1420-51.662kb:NZ_CP011982.1/CP011982.1	-	5	5653	5381	7/23/15	2/21/17	Complete Genome	JCVI	SAMN02141993	GCA_000406765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/765/GCA_000406765.2_ASM40676v2	24913165	500_1420
Oceanobacillus rekensis	937927	PRJNA360564	360564	Terrabacteria group	Firmicutes	3.8651	37.4	-	MTBQ01	19	3792	3605	5/19/17	6/15/17	Contig	Sichuan University	SAMN06214032	GCA_002153375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/375/GCA_002153375.1_ASM215337v1	-	PT-11
Gluconobacter sp. DsW_056	1511209	PRJNA253128	253128	Proteobacteria	Alphaproteobacteria	3.17573	59.7	-	JOPF01	47	2960	2842	5/19/17	5/24/17	Contig	Cornell University	SAMN02866234	GCA_002153595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/595/GCA_002153595.1_DsW_056	-	DsW_056
Sanguibacter gelidistatuariae	1814289	PRJEB15406	343095	Terrabacteria group	Actinobacteria	4.04017	69.6	-	FMYH01	18	3626	3473	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216410	GCA_900096585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/096/585/GCA_900096585.1_IMG-taxon_2657245272_annotated_assembly	-	ISLP-3
Methanonatronarchaeum thermophilum	1927129	PRJNA356895	356895	Euryarchaeota	Methanonatronarchaeia	1.51314	37.9	-	MRZU01	8	1543	1481	5/22/17	5/24/17	Contig	National Center for Biotechnology Information	SAMN05770049	GCA_002153915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/915/GCA_002153915.1_ASM215391v1	-	AMET1
Streptomyces fimicarius	67295	PRJNA293375	293375	Terrabacteria group	Actinobacteria	7.81986	71.8	-	MUNB01	846	7195	6442	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06282270	GCA_002154345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/345/GCA_002154345.1_ASM215434v1	-	NRRL ISP-5322
Streptomyces castelarensis	260811	PRJNA293375	293375	Terrabacteria group	Actinobacteria	10.8072	70.7	-	MUBN01	1258	9689	8180	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06277329	GCA_002154275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/275/GCA_002154275.1_ASM215427v1	-	NRRL B-24289
Streptomyces albovinaceus	66867	PRJNA293375	293375	Terrabacteria group	Actinobacteria	7.23732	71.4	-	MUAX01	594	6714	6009	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06276569	GCA_002154385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/385/GCA_002154385.1_ASM215438v1	-	NRRL B-2566
Streptomyces angustmyceticus	285578	PRJNA293375	293375	Terrabacteria group	Actinobacteria	7.46247	72.1	-	MUAY01	874	6729	5956	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06276655	GCA_002154415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/415/GCA_002154415.1_ASM215441v1	-	NRRL B-2347
Streptomyces daghestanicus	66885	PRJNA293375	293375	Terrabacteria group	Actinobacteria	14.9004	70.9	-	MUBO01	1320	-	-	5/22/17	5/22/17	Scaffold	USDA/ARS/NCAUR	SAMN06277358	GCA_002154435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/435/GCA_002154435.1_ASM215443v1	-	NRRL B-2710
Streptomyces cacaoi subsp. cacaoi	66857	PRJNA293375	293375	Terrabacteria group	Actinobacteria	8.13681	73.2	-	MUBL01	981	6785	6038	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06277326	GCA_002154495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/495/GCA_002154495.1_ASM215449v1	-	NRRL B-1220
Streptomyces carpinensis	66369	PRJNA293375	293375	Terrabacteria group	Actinobacteria	10.4056	71	-	MUBM01	824	9558	8453	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06277327	GCA_002154505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/505/GCA_002154505.1_ASM215450v1	-	NRRL B-16921
Streptomyces murinus	33900	PRJNA293375	293375	Terrabacteria group	Actinobacteria	7.95457	71.7	-	MUNF01	1088	7288	6372	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06282499	GCA_002154555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/555/GCA_002154555.1_ASM215455v1	-	NRRL B-2286
Streptomyces bobili	67280	PRJNA293375	293375	Terrabacteria group	Actinobacteria	8.06254	71.2	-	MUBA01	946	7552	6636	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06277082	GCA_002154575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/575/GCA_002154575.1_ASM215457v1	-	NRRL B-1338
Streptomyces pseudogriseolus	36817	PRJNA293375	293375	Terrabacteria group	Actinobacteria	7.26413	72.5	-	MUNG01	773	6706	6030	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06282523	GCA_002154585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/585/GCA_002154585.1_ASM215458v1	-	NRRL B-3288
Streptomyces recifensis	67355	PRJNA293375	293375	Terrabacteria group	Actinobacteria	6.1845	71.6	-	MUNH01	926	5956	5154	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06283862	GCA_002154615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/615/GCA_002154615.1_ASM215461v1	-	NRRL B-3811
Streptomyces milbemycinicus	476552	PRJNA293375	293375	Terrabacteria group	Actinobacteria	11.6176	70.6	-	MUNE01	1328	10177	8851	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06282496	GCA_002154605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/605/GCA_002154605.1_ASM215460v1	-	NRRL 5739
Streptomyces reticuliscabiei	146821	PRJNA293375	293375	Terrabacteria group	Actinobacteria	9.96291	70	-	MUNI01	897	8964	8164	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06283863	GCA_002154675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/675/GCA_002154675.1_ASM215467v1	-	NRRL B-24446
bacterium AM6	1954209	PRJNA371542	371542	unclassified Bacteria	unclassified Bacteria (miscellaneous)	4.29504	66.5	-	MUYX01	494	4105	2443	5/22/17	5/22/17	Contig	Ibaraki University	SAMN06309538	GCA_002155055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/055/GCA_002155055.1_ASM215505v1	-	AM6
Porphyrobacter colymbi	1161202	PRJNA322640	322640	Proteobacteria	Alphaproteobacteria	4.30921	66.5	-	MUYK01	52	4109	3947	5/22/17	5/24/17	Scaffold	"Second Institute of Oceanography, State Oceanic Administration"	SAMN06251559	GCA_002155685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/685/GCA_002155685.1_ASM215568v1	-	JCM 18338
Porphyrobacter tepidarius	60454	PRJNA322640	322640	Proteobacteria	Alphaproteobacteria	3.21682	65.9	-	MUYJ01	32	3095	2979	5/22/17	5/24/17	Contig	"Second Institute of Oceanography, State Oceanic Administration"	SAMN06251563	GCA_002155695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/695/GCA_002155695.1_ASM215569v1	-	DSM 10594
Streptomyces thermovulgaris	1934	PRJNA293375	293375	Terrabacteria group	Actinobacteria	6.02162	71.7	-	MUME01	595	5383	4815	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06291438	GCA_002155915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/915/GCA_002155915.1_ASM215591v1	-	NRRL B-12375
Streptomyces tricolor	68277	PRJNA293375	293375	Terrabacteria group	Actinobacteria	8.83236	72.5	-	MUMF01	1107	8323	7279	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06291439	GCA_002155905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/905/GCA_002155905.1_ASM215590v1	-	NRRL B-16925
Allokutzneria sp. NRRL B-24872	1137961	PRJNA369760	369760	Terrabacteria group	Actinobacteria	8.18689	70.1	-	MUMH01	475	7543	7202	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06294970	GCA_002155965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/965/GCA_002155965.1_ASM215596v1	-	NRRL B-24872
Streptomyces rhizosphaericus	114699	PRJNA293375	293375	Terrabacteria group	Actinobacteria	11.5584	70.9	-	MUMC01	1370	10020	8536	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06291435	GCA_002155885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/885/GCA_002155885.1_ASM215588v1	-	NRRL B-24304
Amycolatopsis kentuckyensis	218823	PRJNA369760	369760	Terrabacteria group	Actinobacteria	10.1839	71.7	-	MUMI01	916	9669	8710	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06294975	GCA_002155975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/975/GCA_002155975.1_ASM215597v1	-	NRRL B-24129
Amycolatopsis lexingtonensis	218822	PRJNA369760	369760	Terrabacteria group	Actinobacteria	10.536	71.5	-	MUMJ01	884	10071	9103	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06294976	GCA_002156005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/005/GCA_002156005.1_ASM215600v1	-	NRRL B-24131
Kosakonia pseudosacchari	1646340	PRJEB10644	294752	Proteobacteria	Gammaproteobacteria	4.95655	53.9	-	FXWP01	29	4825	4638	5/20/17	5/24/17	Contig	JUSTUS LIEBIG UNIVERSITY	SAMEA104072116	GCA_900184035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/184/035/GCA_900184035.1_Kosakonia_pseudosacchari_JM-387_T	-	-
Vibrio gigantis	296199	PRJNA375723	375723	Proteobacteria	Gammaproteobacteria	5.67708	44.1	-	MVJE01	96	5115	4922	5/22/17	5/24/17	Contig	Universiti Teknologi Malaysia	SAMN06344326	GCA_002156475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/475/GCA_002156475.1_ASM215647v1	-	LGP 13
Pseudoalteromonas ulvae	107327	PRJNA375740	375740	Proteobacteria	Gammaproteobacteria	4.58648	41.6	-	MWPV01	14	4175	3967	5/22/17	5/24/17	Scaffold	Universite de Toulon	SAMN06344515	GCA_002156545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/545/GCA_002156545.1_ASM215654v1	-	TC14
Pedobacter lusitanus	1503925	PRJNA273375	273375	FCB group	Bacteroidetes/Chlorobi group	5.98819	39	-	JXRA01	201	5284	4955	2/5/15	5/31/17	Contig	University of Aveiro	SAMN03291000	GCA_000832545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/545/GCA_000832545.1_ASM83254v1	25814603	NL19
Pseudomonas paralactis	1615673	PRJNA274345	274345	Proteobacteria	Gammaproteobacteria	6.01521	59.7	-	JYLN01	37	5506	5324	11/6/15	5/31/17	Contig	"Zentralinstitut fuer Ernaehrungs- und Lebensmittelforschung (ZIEL), WZW, TUM"	SAMN03332051	GCA_001439735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/735/GCA_001439735.1_mG273	-	DSM 29164
Pseudomonas lactis	1615674	PRJNA274345	274345	Proteobacteria	Gammaproteobacteria	6.7331	60	-	JYLO01	42	6268	6022	11/6/15	5/31/17	Contig	"Zentralinstitut fuer Ernaehrungs- und Lebensmittelforschung (ZIEL), WZW, TUM"	SAMN03332052	GCA_001439845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/845/GCA_001439845.1_MG336	-	DSM 29167
Algoriphagus resistens	1750590	PRJNA301083	301083	FCB group	Bacteroidetes/Chlorobi group	6.13158	41.9	-	LMXN01	43	5237	5067	11/12/15	5/31/17	Contig	Shandong University	SAMN04235588	GCA_001442615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/615/GCA_001442615.1_ASM144261v1	-	NH1
Pararhizobium antarcticum	1798805	PRJNA311629	311629	Proteobacteria	Alphaproteobacteria	5.45755	60.7	-	LSRP01	161	5203	4979	11/23/16	5/31/17	Contig	University of Copenhagen	SAMN04486996	GCA_001885585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/585/GCA_001885585.1_ASM188558v1	-	59
Desulfohalobium retbaense DSM 5692	485915	PRJNA29199	29199	Proteobacteria	delta/epsilon subdivisions	2.90957	57.2915	chromosome:NC_013223.1/CP001734.1; plasmid pDRET01:NC_013224.1/CP001735.1	-	2	2574	2488	9/11/09	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598459	GCA_000024325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/325/GCA_000024325.1_ASM2432v1	21304676	DSM 5692
Klebsiella pneumoniae	573	PRJNA248655	248655	Proteobacteria	Gammaproteobacteria	5.51033	57.2905	chromosome:NZ_CP009114.1/CP009114.1; plasmid plasmid1:NZ_CP009116.1/CP009116.1; plasmid plasmid2:NZ_CP009115.1/CP009115.1	-	3	5577	5320	8/14/14	2/21/17	Complete Genome	FNLCR	SAMN02777842	GCA_000739495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/495/GCA_000739495.1_ASM73949v1	24798270	blaNDM-1
Klebsiella pneumoniae	573	PRJNA319426	319426	Proteobacteria	Gammaproteobacteria	5.4358	57.2904	chromosome:NZ_CP015382.1/CP015382.1; plasmid CN1_p1:NZ_CP015383.1/CP015383.1; plasmid CN1_p2:NZ_CP015384.1/CP015384.1	-	3	5440	5169	1/17/17	2/22/17	Complete Genome	New York Medical College	SAMN04889855	GCA_001952875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/875/GCA_001952875.1_ASM195287v1	-	CN1
Klebsiella pneumoniae	573	PRJNA246471	246471	Proteobacteria	Gammaproteobacteria	5.59498	57.2856	chromosome:NZ_CP018356.1/CP018356.1; plasmid pCAV1453-14:NZ_CP018353.1/CP018353.1; plasmid pCAV1453-208:NZ_CP018355.1/CP018355.1; plasmid pCAV1453-46:NZ_CP018354.1/CP018354.1	-	4	5676	5423	12/13/16	2/21/17	Complete Genome	University of Oxford	SAMN03733793	GCA_001902255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/255/GCA_001902255.1_ASM190225v1	-	CAV1453
Klebsiella pneumoniae subsp. pneumoniae KP5-1	1199150	PRJNA168515	168515	Proteobacteria	Gammaproteobacteria	5.55147	57.2718	chromosome:CP008700.1; plasmid pKp5-1:CP008701.1	-	2	5198	4918	6/27/14	9/25/14	Complete Genome	USDA-ARS	SAMN02746181	GCA_000714635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/635/GCA_000714635.1_ASM71463v1	-	KP5-1
Arthrobacter agilis	37921	PRJNA382791	382791	Terrabacteria group	Actinobacteria	3.87813	67.7	-	NFSC01	31	3536	3416	5/25/17	5/31/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN06723189	GCA_002157505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/505/GCA_002157505.1_ASM215750v1	-	4041
Gammaproteobacteria bacterium TMED1	1986731	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	2.2272	43.8	-	NHBG01	26	2091	2025	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971855	GCA_002167855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/855/GCA_002167855.1_ASM216785v1	-	-
Rhodospirillaceae bacterium TMED8	1986645	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	3.35046	45.2	-	NHBN01	52	3187	3104	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971862	GCA_002167875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/875/GCA_002167875.1_ASM216787v1	-	-
Gammaproteobacteria bacterium TMED57	1986764	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	2.10815	54.7	-	NHDK01	109	2106	2059	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971911	GCA_002167905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/905/GCA_002167905.1_ASM216790v1	-	-
Flavobacteriaceae bacterium TMED48	1986717	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	1.76796	38.2	-	NHDB01	57	1682	1570	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971902	GCA_002167945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/945/GCA_002167945.1_ASM216794v1	-	-
Proteobacteria bacterium TMED51	1986847	PRJNA385857	385857	Proteobacteria	unclassified Proteobacteria	4.34315	52.7	-	NHDE01	109	4287	4150	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971905	GCA_002167935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/935/GCA_002167935.1_ASM216793v1	-	-
Candidatus Puniceispirillum sp. TMED52	1986639	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	2.927	47.9	-	NHDF01	171	2925	2824	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971906	GCA_002167925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/925/GCA_002167925.1_ASM216792v1	-	-
Cellvibrionales bacterium TMED47	1986841	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	1.77877	41.9	-	NHDA01	54	1742	1667	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971901	GCA_002167985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/985/GCA_002167985.1_ASM216798v1	-	-
Flavobacteriaceae bacterium TMED42	1986716	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	2.08705	39.5	-	NHCV01	45	1895	1816	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971896	GCA_002168005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/005/GCA_002168005.1_ASM216800v1	-	-
Gammaproteobacteria bacterium TMED36	1986762	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	1.9304	37.3	-	NHCP01	65	1942	1891	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971890	GCA_002168035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/035/GCA_002168035.1_ASM216803v1	-	-
Verrucomicrobia bacterium TMED44	1986791	PRJNA385857	385857	PVC group	Verrucomicrobia	2.35462	41.9	-	NHCX01	132	2126	2055	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971898	GCA_002168015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/015/GCA_002168015.1_ASM216801v1	-	-
Gammaproteobacteria bacterium TMED30	1986759	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	3.02121	51.9	-	NHCJ01	130	2906	2851	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971884	GCA_002168065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/065/GCA_002168065.1_ASM216806v1	-	-
Rhizobiales bacterium TMED25	1986854	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.42124	33.2	-	NHCE01	10	1474	1426	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971879	GCA_002168075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/075/GCA_002168075.1_ASM216807v1	-	-
Phycisphaera sp. TMED24	1986832	PRJNA385857	385857	PVC group	Planctomycetes	2.25536	57.5	-	NHCD01	41	2033	1963	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971878	GCA_002168105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/105/GCA_002168105.1_ASM216810v1	-	-
Rhodospirillaceae bacterium TMED23	1986864	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	2.56821	37.7	-	NHCC01	22	2429	2367	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971877	GCA_002168115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/115/GCA_002168115.1_ASM216811v1	-	-
Roseibacillus sp. TMED18	1986590	PRJNA385857	385857	PVC group	Verrucomicrobia	4.18974	55	-	NHBX01	122	3199	3108	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971872	GCA_002168145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/145/GCA_002168145.1_ASM216814v1	-	-
bacterium TMED15	1986651	PRJNA385857	385857	unclassified Bacteria	unclassified Bacteria (miscellaneous)	4.68923	40.2	-	NHBU01	207	3909	3811	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971869	GCA_002168185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/185/GCA_002168185.1_ASM216818v1	-	-
Planctomycetaceae bacterium TMED10	1986833	PRJNA385857	385857	PVC group	Planctomycetes	3.7586	50.3	-	NHBP01	117	3222	3118	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971864	GCA_002168195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/195/GCA_002168195.1_ASM216819v1	-	-
Micavibrio sp. TMED2	1986633	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	3.34644	58.5	-	NHBH01	9	3129	3051	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971856	GCA_002168225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/225/GCA_002168225.1_ASM216822v1	-	-
Candidatus Pelagibacter sp. TMED286	1986828	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.782641	28.8	-	NHMF01	64	830	795	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972140	GCA_002168325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/325/GCA_002168325.1_ASM216832v1	-	-
Rhodopirellula sp. TMED283	1986660	PRJNA385857	385857	PVC group	Planctomycetes	2.95605	51.4	-	NHMC01	47	2221	2165	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972137	GCA_002168315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/315/GCA_002168315.1_ASM216831v1	-	-
Euryarchaeota archaeon TMED280	1986695	PRJNA385857	385857	Euryarchaeota	unclassified Euryarchaeota	0.773563	37.6	-	NHLZ01	30	722	683	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972134	GCA_002168355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/355/GCA_002168355.1_ASM216835v1	-	-
Flammeovirgaceae bacterium TMED290	1986700	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	1.66101	34.1	-	NHMJ01	11	1547	1506	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972144	GCA_002168375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/375/GCA_002168375.1_ASM216837v1	-	-
Euryarchaeota archaeon TMED279	1986694	PRJNA385857	385857	Euryarchaeota	unclassified Euryarchaeota	0.997332	43	-	NHLY01	50	885	852	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972133	GCA_002168385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/385/GCA_002168385.1_ASM216838v1	-	-
Methylococcaceae bacterium TMED282	1986758	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	1.51124	43.4	-	NHMB01	78	1537	1494	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972136	GCA_002168395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/395/GCA_002168395.1_ASM216839v1	-	-
Pelagibacteraceae bacterium TMED287	1986829	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.841731	31.5	-	NHMG01	27	897	859	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972141	GCA_002168405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/405/GCA_002168405.1_ASM216840v1	-	-
Rickettsiales bacterium TMED269	1986872	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.627412	36.6	-	NHLO01	25	652	624	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972123	GCA_002168465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/465/GCA_002168465.1_ASM216846v1	-	-
Actinobacteria bacterium TMED270	1986622	PRJNA385857	385857	Terrabacteria group	Actinobacteria	1.24933	51	-	NHLP01	23	1250	1222	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972124	GCA_002168455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/455/GCA_002168455.1_ASM216845v1	-	-
Gammaproteobacteria bacterium TMED278	1986756	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	0.923144	31.1	-	NHLX01	34	995	937	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972132	GCA_002168475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/475/GCA_002168475.1_ASM216847v1	-	-
bacterium TMED277	1986659	PRJNA385857	385857	unclassified Bacteria	unclassified Bacteria (miscellaneous)	1.07687	34.4	-	NHLW01	90	1190	1145	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972131	GCA_002168485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/485/GCA_002168485.1_ASM216848v1	-	-
Kiritimatiellaceae bacterium TMED266	1987167	PRJNA385857	385857	PVC group	Kiritimatiellaeota	1.08051	48.9	-	NHLL01	28	997	963	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972120	GCA_002168535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/535/GCA_002168535.1_ASM216853v1	-	-
Proteobacteria bacterium TMED261	1986846	PRJNA385857	385857	Proteobacteria	unclassified Proteobacteria	2.19603	45.6	-	NHLG01	152	2175	2116	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972115	GCA_002168565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/565/GCA_002168565.1_ASM216856v1	-	-
bacterium TMED264	1986658	PRJNA385857	385857	unclassified Bacteria	unclassified Bacteria (miscellaneous)	1.72385	32.9	-	NHLJ01	111	1670	1578	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972118	GCA_002168555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/555/GCA_002168555.1_ASM216855v1	-	-
Flammeovirgaceae bacterium TMED262	1986699	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	0.921469	31	-	NHLH01	17	878	839	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972116	GCA_002168595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/595/GCA_002168595.1_ASM216859v1	-	-
Candidatus Pelagibacter sp. TMED263	1986822	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.85145	30.3	-	NHLI01	68	943	892	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972117	GCA_002168605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/605/GCA_002168605.1_ASM216860v1	-	-
Gammaproteobacteria bacterium TMED257	1986754	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	0.747899	30.6	-	NHLC01	12	832	800	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972111	GCA_002168635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/635/GCA_002168635.1_ASM216863v1	-	-
Gammaproteobacteria bacterium TMED260	1986755	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	1.87777	52.1	-	NHLF01	35	1754	1701	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972114	GCA_002168645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/645/GCA_002168645.1_ASM216864v1	-	-
Rickettsiales bacterium TMED254	1986871	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.840297	28.4	-	NHKZ01	57	939	915	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972108	GCA_002168685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/685/GCA_002168685.1_ASM216868v1	-	-
Rhodospirillaceae bacterium TMED256	1986865	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	2.75221	54.7	-	NHLB01	170	2749	2609	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972110	GCA_002168655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/655/GCA_002168655.1_ASM216865v1	-	-
Candidatus Pelagibacter sp. TMED253	1986819	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.869769	30.4	-	NHKY01	59	904	864	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972107	GCA_002168715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/715/GCA_002168715.1_ASM216871v1	-	-
Euryarchaeota archaeon TMED252	1986692	PRJNA385857	385857	Euryarchaeota	unclassified Euryarchaeota	1.2514	59.3	-	NHKX01	70	1050	1016	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972106	GCA_002168725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/725/GCA_002168725.1_ASM216872v1	-	-
bacterium TMED250	1986657	PRJNA385857	385857	unclassified Bacteria	unclassified Bacteria (miscellaneous)	0.883784	34.2	-	NHKV01	17	839	803	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972104	GCA_002168745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/745/GCA_002168745.1_ASM216874v1	-	-
Rickettsiales bacterium TMED251	1986870	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.747219	28.6	-	NHKW01	30	794	749	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972105	GCA_002168775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/775/GCA_002168775.1_ASM216877v1	-	-
Rhizobiales bacterium TMED249	1986853	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.12962	46.9	-	NHKU01	18	1140	1076	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972103	GCA_002168795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/795/GCA_002168795.1_ASM216879v1	-	-
Euryarchaeota archaeon TMED248	1986691	PRJNA385857	385857	Euryarchaeota	unclassified Euryarchaeota	1.12427	39.6	-	NHKT01	50	985	950	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972102	GCA_002168805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/805/GCA_002168805.1_ASM216880v1	-	-
Candidatus Puniceispirillum sp. TMED245	1986635	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.72903	59.1	-	NHKQ01	98	1685	1626	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972099	GCA_002168815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/815/GCA_002168815.1_ASM216881v1	-	-
Acidimicrobiaceae bacterium TMED244	1986621	PRJNA385857	385857	Terrabacteria group	Actinobacteria	0.583806	33.7	-	NHKP01	24	660	630	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972098	GCA_002168855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/855/GCA_002168855.1_ASM216885v1	-	-
Gammaproteobacteria bacterium TMED243	1986753	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	2.27061	50.8	-	NHKO01	36	2286	2247	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972097	GCA_002168875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/875/GCA_002168875.1_ASM216887v1	-	-
Gammaproteobacteria bacterium TMED242	1986752	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	0.800907	32.3	-	NHKN01	36	889	846	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972096	GCA_002168885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/885/GCA_002168885.1_ASM216888v1	-	-
Planctomycetaceae bacterium TMED241	1986836	PRJNA385857	385857	PVC group	Planctomycetes	1.88332	61.9	-	NHKM01	100	2088	2004	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972095	GCA_002168905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/905/GCA_002168905.1_ASM216890v1	-	-
Planctomycetaceae bacterium TMED240	1986835	PRJNA385857	385857	PVC group	Planctomycetes	3.78774	50.5	-	NHKL01	57	2888	2846	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972094	GCA_002168935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/935/GCA_002168935.1_ASM216893v1	-	-
Flavobacteriaceae bacterium TMED238	1986714	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	1.17287	29.3	-	NHKJ01	88	1141	1105	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972092	GCA_002168955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/955/GCA_002168955.1_ASM216895v1	-	-
Gammaproteobacteria bacterium TMED236	1986751	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	1.32014	35.3	-	NHKH01	71	1348	1290	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972090	GCA_002168965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/965/GCA_002168965.1_ASM216896v1	-	-
Flavobacteriales bacterium TMED235	1986726	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	1.70423	32.3	-	NHKG01	112	1591	1505	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972089	GCA_002168995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/995/GCA_002168995.1_ASM216899v1	-	-
Pelagibacteraceae bacterium TMED232	1986813	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.522748	28.9	-	NHKD01	17	606	572	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972086	GCA_002169015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/015/GCA_002169015.1_ASM216901v1	-	-
Chloroflexi bacterium TMED230	1986675	PRJNA385857	385857	Terrabacteria group	Chloroflexi	0.844759	30.6	-	NHKB01	11	872	849	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972084	GCA_002169035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/035/GCA_002169035.1_ASM216903v1	-	-
Phycisphaeraceae bacterium TMED231	1986831	PRJNA385857	385857	PVC group	Planctomycetes	2.0618	65.9	-	NHKC01	89	1726	1671	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972085	GCA_002169045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/045/GCA_002169045.1_ASM216904v1	-	-
Flavobacteriales bacterium TMED228	1986725	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	1.76199	33.6	-	NHJZ01	129	1793	1712	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972082	GCA_002169075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/075/GCA_002169075.1_ASM216907v1	-	-
Acidimicrobiaceae bacterium TMED224	1986620	PRJNA385857	385857	Terrabacteria group	Actinobacteria	1.43549	51.1	-	NHJV01	14	1447	1404	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972078	GCA_002169095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/095/GCA_002169095.1_ASM216909v1	-	-
Gammaproteobacteria bacterium TMED226	1986749	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	0.775625	32.8	-	NHJX01	23	843	802	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972080	GCA_002169105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/105/GCA_002169105.1_ASM216910v1	-	-
bacterium TMED221	1986656	PRJNA385857	385857	unclassified Bacteria	unclassified Bacteria (miscellaneous)	0.992124	35.4	-	NHJS01	69	1016	981	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972075	GCA_002169115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/115/GCA_002169115.1_ASM216911v1	-	-
Flavobacteriaceae bacterium TMED220	1986713	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	0.970944	28.4	-	NHJR01	34	941	900	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972074	GCA_002169155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/155/GCA_002169155.1_ASM216915v1	-	-
Gammaproteobacteria bacterium TMED219	1986746	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	0.732313	36.3	-	NHJQ01	13	791	716	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972073	GCA_002169175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/175/GCA_002169175.1_ASM216917v1	-	-
Flavobacteriales bacterium TMED288	1986727	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	0.937203	27.3	-	NHMH01	12	847	812	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972142	GCA_002169195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/195/GCA_002169195.1_ASM216919v1	-	-
Thiotrichales bacterium TMED285	1986875	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	0.705643	37.1	-	NHME01	9	722	690	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972139	GCA_002169215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/215/GCA_002169215.1_ASM216921v1	-	-
Bacteroidetes bacterium TMED284	1986663	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	0.781039	40	-	NHMD01	16	683	640	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972138	GCA_002169235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/235/GCA_002169235.1_ASM216923v1	-	-
Candidatus Pelagibacter sp. TMED275	1986827	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.442974	29.9	-	NHLU01	28	506	485	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972129	GCA_002169255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/255/GCA_002169255.1_ASM216925v1	-	-
Candidatus Pelagibacter sp. TMED273	1986826	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.31189	28.1	-	NHLS01	33	1421	1370	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972127	GCA_002169275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/275/GCA_002169275.1_ASM216927v1	-	-
Rhodobacterales bacterium TMED271	1986637	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.936112	37.1	-	NHLQ01	33	980	955	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972125	GCA_002169295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/295/GCA_002169295.1_ASM216929v1	-	-
Pelagibacteraceae bacterium TMED268	1986824	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.418064	28.1	-	NHLN01	31	464	433	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972122	GCA_002169315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/315/GCA_002169315.1_ASM216931v1	-	-
Candidatus Pelagibacter sp. TMED272	1986825	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.647096	35.2	-	NHLR01	10	706	684	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972126	GCA_002169335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/335/GCA_002169335.1_ASM216933v1	-	-
Pelagibacteraceae bacterium TMED259	1986821	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.745884	33.9	-	NHLE01	58	806	783	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972113	GCA_002169365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/365/GCA_002169365.1_ASM216936v1	-	-
Flavobacteriaceae bacterium TMED265	1986715	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	1.12371	37.2	-	NHLK01	13	1091	1043	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972119	GCA_002169355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/355/GCA_002169355.1_ASM216935v1	-	-
Pelagibacteraceae bacterium TMED258	1986820	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.550777	31.3	-	NHLD01	38	632	599	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972112	GCA_002169395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/395/GCA_002169395.1_ASM216939v1	-	-
Euryarchaeota archaeon TMED255	1986693	PRJNA385857	385857	Euryarchaeota	unclassified Euryarchaeota	2.1644	45.1	-	NHLA01	100	1933	1864	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972109	GCA_002169405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/405/GCA_002169405.1_ASM216940v1	-	-
Pelagibacteraceae bacterium TMED247	1986818	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.788039	31.3	-	NHKS01	10	893	865	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972101	GCA_002169435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/435/GCA_002169435.1_ASM216943v1	-	-
Pelagibacteraceae bacterium TMED246	1986817	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.568267	28.4	-	NHKR01	4	593	574	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972100	GCA_002169445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/445/GCA_002169445.1_ASM216944v1	-	-
Candidatus Pelagibacter sp. TMED239	1986816	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.874924	29.3	-	NHKK01	54	922	860	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972093	GCA_002169475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/475/GCA_002169475.1_ASM216947v1	-	-
Pelagibacteraceae bacterium TMED237	1986815	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.809192	28.1	-	NHKI01	26	839	816	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972091	GCA_002169485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/485/GCA_002169485.1_ASM216948v1	-	-
Pelagibacteraceae bacterium TMED233	1986814	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.723713	27.3	-	NHKE01	25	763	719	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972087	GCA_002169525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/525/GCA_002169525.1_ASM216952v1	-	-
Gammaproteobacteria bacterium TMED234	1986750	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	0.87145	33.9	-	NHKF01	39	963	925	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972088	GCA_002169515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/515/GCA_002169515.1_ASM216951v1	-	-
Euryarchaeota archaeon TMED215	1986690	PRJNA385857	385857	Euryarchaeota	unclassified Euryarchaeota	0.994889	46.6	-	NHJM01	20	901	869	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972069	GCA_002169555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/555/GCA_002169555.1_ASM216955v1	-	-
Rickettsiales bacterium TMED289	1986873	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.58853	30.2	-	NHMI01	29	1550	1499	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972143	GCA_002169595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/595/GCA_002169595.1_ASM216959v1	-	-
Gammaproteobacteria bacterium TMED222	1986747	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	0.894924	33.6	-	NHJT01	58	961	930	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972076	GCA_002169605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/605/GCA_002169605.1_ASM216960v1	-	-
Cyanobacteria bacterium TMED229	1986679	PRJNA385857	385857	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.3528	57.5	-	NHKA01	30	1414	1375	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972083	GCA_002169615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/615/GCA_002169615.1_ASM216961v1	-	-
Gammaproteobacteria bacterium TMED225	1986748	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	0.858815	31.2	-	NHJW01	35	941	893	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972079	GCA_002169625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/625/GCA_002169625.1_ASM216962v1	-	-
Flavobacteriaceae bacterium TMED212	1986712	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	1.22929	34.7	-	NHJJ01	36	1155	1096	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972066	GCA_002169675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/675/GCA_002169675.1_ASM216967v1	-	-
bacterium TMED217	1986780	PRJNA385857	385857	unclassified Bacteria	unclassified Bacteria (miscellaneous)	1.10513	32.5	-	NHJO01	27	986	965	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972071	GCA_002169695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/695/GCA_002169695.1_ASM216969v1	-	-
Candidatus Thioglobus sp. TMED218	1986874	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	0.962573	38.4	-	NHJP01	62	1007	967	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972072	GCA_002169705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/705/GCA_002169705.1_ASM216970v1	-	-
Rickettsiales bacterium TMED211	1986869	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.905656	30.9	-	NHJI01	71	980	941	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972065	GCA_002169685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/685/GCA_002169685.1_ASM216968v1	-	-
Flavobacteriaceae bacterium TMED204	1986709	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	1.27726	39.1	-	NHJB01	52	1208	1175	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972058	GCA_002169765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/765/GCA_002169765.1_ASM216976v1	-	-
bacterium TMED190	1986655	PRJNA385857	385857	unclassified Bacteria	unclassified Bacteria (miscellaneous)	1.05985	27.5	-	NHIN01	14	991	873	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972044	GCA_002169785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/785/GCA_002169785.1_ASM216978v1	-	-
Candidatus Pelagibacter sp. TMED197	1986808	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.827951	29.5	-	NHIU01	44	1000	950	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972051	GCA_002169755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/755/GCA_002169755.1_ASM216975v1	-	-
Pelagibacteraceae bacterium TMED201	1986809	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.812828	27.9	-	NHIY01	42	884	832	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972055	GCA_002169775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/775/GCA_002169775.1_ASM216977v1	-	-
Acidimicrobiaceae bacterium TMED189	1986618	PRJNA385857	385857	Terrabacteria group	Actinobacteria	0.641117	34.1	-	NHIM01	32	752	728	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972043	GCA_002169845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/845/GCA_002169845.1_ASM216984v1	-	-
Gammaproteobacteria bacterium TMED163	1986739	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	2.34376	52.4	-	NHHM01	29	2122	2058	6/5/17	6/5/17	Scaffold	University of Southern California	SAMN06972017	GCA_002169855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/855/GCA_002169855.1_ASM216985v1	-	-
Flavobacteriaceae bacterium TMED179	1986707	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	1.03925	32.6	-	NHIC01	10	959	898	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972033	GCA_002169865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/865/GCA_002169865.1_ASM216986v1	-	-
bacterium TMED181	1986654	PRJNA385857	385857	unclassified Bacteria	unclassified Bacteria (miscellaneous)	2.48866	52.3	-	NHIE01	170	2064	1965	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972035	GCA_002169835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/835/GCA_002169835.1_ASM216983v1	-	-
Proteobacteria bacterium TMED154	1986844	PRJNA385857	385857	Proteobacteria	unclassified Proteobacteria	1.7468	47.4	-	NHHD01	117	1702	1641	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972008	GCA_002169915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/915/GCA_002169915.1_ASM216991v1	-	-
Rhodobacteraceae bacterium TMED160	1986860	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.65804	38.7	-	NHHJ01	84	1643	1590	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972014	GCA_002169925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/925/GCA_002169925.1_ASM216992v1	-	-
Candidatus Pelagibacter sp. TMED153	1986803	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.950468	31.9	-	NHHC01	72	958	928	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972007	GCA_002169935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/935/GCA_002169935.1_ASM216993v1	-	-
Alphaproteobacteria bacterium TMED150	1986628	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.42294	46	-	NHGZ01	6	1496	1459	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972004	GCA_002169995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/995/GCA_002169995.1_ASM216999v1	-	-
bacterium TMED144	1986778	PRJNA385857	385857	unclassified Bacteria	unclassified Bacteria (miscellaneous)	1.40307	32.9	-	NHGT01	44	1305	1237	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971998	GCA_002170005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/005/GCA_002170005.1_ASM217000v1	-	-
Cellvibrionales bacterium TMED148	1986840	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	1.99222	44.5	-	NHGX01	131	1902	1838	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972002	GCA_002170035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/035/GCA_002170035.1_ASM217003v1	-	-
Flavobacteriaceae bacterium TMED147	1986705	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	1.15239	33.7	-	NHGW01	87	1126	1079	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972001	GCA_002170045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/045/GCA_002170045.1_ASM217004v1	-	-
Euryarchaeota archaeon TMED141	1986686	PRJNA385857	385857	Euryarchaeota	unclassified Euryarchaeota	2.36491	53.7	-	NHGQ01	64	2089	2010	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971995	GCA_002170075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/075/GCA_002170075.1_ASM217007v1	-	-
Verrucomicrobiaceae bacterium TMED137	1986879	PRJNA385857	385857	PVC group	Verrucomicrobia	2.57717	48.7	-	NHGM01	37	2034	1968	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971991	GCA_002170085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/085/GCA_002170085.1_ASM217008v1	-	-
Acidimicrobiaceae bacterium TMED130	1986616	PRJNA385857	385857	Terrabacteria group	Actinobacteria	1.45832	44.2	-	NHGF01	8	1469	1432	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971984	GCA_002170115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/115/GCA_002170115.1_ASM217011v1	-	-
Candidatus Pelagibacter sp. TMED128	1986799	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.737352	28.4	-	NHGD01	34	772	744	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971982	GCA_002170125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/125/GCA_002170125.1_ASM217012v1	-	-
Rickettsiales bacterium TMED127	1986866	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.202	30.1	-	NHGC01	12	1306	1264	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971981	GCA_002170155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/155/GCA_002170155.1_ASM217015v1	-	-
Flavobacteriales bacterium TMED123	1986721	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	2.13516	38.4	-	NHFY01	99	2048	1981	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971977	GCA_002170165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/165/GCA_002170165.1_ASM217016v1	-	-
Candidatus Pelagibacter sp. TMED118	1986797	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.56353	30.6	-	NHFT01	13	1557	1505	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971972	GCA_002170205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/205/GCA_002170205.1_ASM217020v1	-	-
Cellvibrionales bacterium TMED122	1986772	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	2.28808	51.8	-	NHFX01	160	2308	2200	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971976	GCA_002170195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/195/GCA_002170195.1_ASM217019v1	-	-
Flavobacteriales bacterium TMED113	1986662	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	1.31103	29.8	-	NHFO01	70	1148	1104	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971967	GCA_002170235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/235/GCA_002170235.1_ASM217023v1	-	-
Gammaproteobacteria bacterium TMED112	1986734	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	1.01469	33.6	-	NHFN01	22	1082	1037	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971966	GCA_002170245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/245/GCA_002170245.1_ASM217024v1	-	-
Candidatus Pelagibacter sp. TMED106	1986796	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.97658	28	-	NHFH01	28	1043	976	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971960	GCA_002170275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/275/GCA_002170275.1_ASM217027v1	-	-
Betaproteobacteria bacterium TMED100	1986666	PRJNA385857	385857	Proteobacteria	Betaproteobacteria	1.46979	34	-	NHFB01	48	1466	1435	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971954	GCA_002170285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/285/GCA_002170285.1_ASM217028v1	-	-
Euryarchaeota archaeon TMED99	1986698	PRJNA385857	385857	Euryarchaeota	unclassified Euryarchaeota	2.08556	45	-	NHFA01	76	1792	1720	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971953	GCA_002170315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/315/GCA_002170315.1_ASM217031v1	-	-
Rhizobiales bacterium TMED94	1986858	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.51037	31.3	-	NHEV01	49	1556	1468	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971948	GCA_002170335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/335/GCA_002170335.1_ASM217033v1	-	-
Gammaproteobacteria bacterium TMED92	1986770	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	2.57851	52.9	-	NHET01	154	2563	2505	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971946	GCA_002170355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/355/GCA_002170355.1_ASM217035v1	-	-
Euryarchaeota archaeon TMED85	1986696	PRJNA385857	385857	Euryarchaeota	unclassified Euryarchaeota	2.0397	38.9	-	NHEM01	37	1737	1681	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971939	GCA_002170365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/365/GCA_002170365.1_ASM217036v1	-	-
Betaproteobacteria bacterium TMED82	1986669	PRJNA385857	385857	Proteobacteria	Betaproteobacteria	1.57986	37.5	-	NHEJ01	7	1586	1538	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971936	GCA_002170395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/395/GCA_002170395.1_ASM217039v1	-	-
bacterium TMED80	1986784	PRJNA385857	385857	unclassified Bacteria	unclassified Bacteria (miscellaneous)	1.78657	33.1	-	NHEH01	55	1631	1572	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971934	GCA_002170405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/405/GCA_002170405.1_ASM217040v1	-	-
Verrucomicrobiaceae bacterium TMED76	1986880	PRJNA385857	385857	PVC group	Verrucomicrobia	3.01155	39.1	-	NHED01	90	2396	2327	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971930	GCA_002170435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/435/GCA_002170435.1_ASM217043v1	-	-
Hyphomicrobiaceae bacterium TMED74	1986774	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	3.60475	53.3	-	NHEB01	105	3497	3329	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971928	GCA_002170445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/445/GCA_002170445.1_ASM217044v1	-	-
Proteobacteria bacterium TMED72	1986848	PRJNA385857	385857	Proteobacteria	unclassified Proteobacteria	4.38162	59.2	-	NHDZ01	215	3849	3779	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971926	GCA_002170485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/485/GCA_002170485.1_ASM217048v1	-	-
Verrucomicrobia bacterium TMED71	1986878	PRJNA385857	385857	PVC group	Verrucomicrobia	2.98074	49.6	-	NHDY01	183	2650	2537	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971925	GCA_002170515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/515/GCA_002170515.1_ASM217051v1	-	-
Methylococcaceae bacterium TMED69	1986766	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	1.97361	38.5	-	NHDW01	10	2050	1995	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971923	GCA_002170535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/535/GCA_002170535.1_ASM217053v1	-	-
Opitutae bacterium TMED67	1986877	PRJNA385857	385857	PVC group	Verrucomicrobia	2.86862	40.2	-	NHDU01	133	2392	2344	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971921	GCA_002170545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/545/GCA_002170545.1_ASM217054v1	-	-
Rhodospirillaceae bacterium TMED63	1986643	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	2.95701	55.5	-	NHDQ01	187	2995	2851	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971917	GCA_002170565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/565/GCA_002170565.1_ASM217056v1	-	-
Alphaproteobacteria bacterium TMED62	1986642	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.5929	28	-	NHDP01	35	1696	1611	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971916	GCA_002170595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/595/GCA_002170595.1_ASM217059v1	-	-
Crocinitomicaceae bacterium TMED209	1986724	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	1.66103	53.9	-	NHJG01	30	1475	1426	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972063	GCA_002170625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/625/GCA_002170625.1_ASM217062v1	-	-
Candidatus Endolissoclinum sp. TMED55	1986641	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	3.4645	43.5	-	NHDI01	123	3381	3293	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971909	GCA_002170615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/615/GCA_002170615.1_ASM217061v1	-	-
Opitutales bacterium TMED207	1986795	PRJNA385857	385857	PVC group	Verrucomicrobia	0.940967	41.4	-	NHJE01	12	919	894	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972061	GCA_002170655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/655/GCA_002170655.1_ASM217065v1	-	-
Flavobacteriaceae bacterium TMED206	1986710	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	1.3693	31.2	-	NHJD01	100	1351	1265	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972060	GCA_002170675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/675/GCA_002170675.1_ASM217067v1	-	-
Flavobacteriaceae bacterium TMED200	1986708	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	0.749459	30.3	-	NHIX01	31	731	634	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972054	GCA_002170695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/695/GCA_002170695.1_ASM217069v1	-	-
bacterium TMED198	1986779	PRJNA385857	385857	unclassified Bacteria	unclassified Bacteria (miscellaneous)	1.13808	34.2	-	NHIV01	80	1086	1060	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972052	GCA_002170735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/735/GCA_002170735.1_ASM217073v1	-	-
Pelagibacteraceae bacterium TMED195	1986631	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.936049	30.1	-	NHIS01	27	1012	986	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972049	GCA_002170745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/745/GCA_002170745.1_ASM217074v1	-	-
Planctomycetes bacterium TMED84	1986838	PRJNA385857	385857	PVC group	Planctomycetes	0.784362	31.4	-	NHIH01	21	771	746	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972038	GCA_002170785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/785/GCA_002170785.1_ASM217078v1	-	-
Euryarchaeota archaeon TMED192	1986689	PRJNA385857	385857	Euryarchaeota	unclassified Euryarchaeota	1.26734	49.5	-	NHIP01	9	1108	1064	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972046	GCA_002170775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/775/GCA_002170775.1_ASM217077v1	-	-
Gammaproteobacteria bacterium TMED180	1986740	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	1.57181	42.7	-	NHID01	105	1618	1564	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972034	GCA_002170815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/815/GCA_002170815.1_ASM217081v1	-	-
Cyanobacteria bacterium TMED177	1986677	PRJNA385857	385857	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.35006	60.3	-	NHIA01	62	1462	1406	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972031	GCA_002170825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/825/GCA_002170825.1_ASM217082v1	-	-
Actinobacteria bacterium TMED172	1986617	PRJNA385857	385857	Terrabacteria group	Actinobacteria	1.55347	49.6	-	NHHV01	7	1461	1440	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972026	GCA_002170855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/855/GCA_002170855.1_ASM217085v1	-	-
Pelagibacteraceae bacterium TMED170	1986806	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.727127	30	-	NHHT01	32	803	756	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972024	GCA_002170875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/875/GCA_002170875.1_ASM217087v1	-	-
Rhizobiales bacterium TMED168	1986851	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.03486	31.1	-	NHHR01	35	1080	1023	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972022	GCA_002170885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/885/GCA_002170885.1_ASM217088v1	-	-
Rhodospirillaceae bacterium TMED167	1986863	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	2.61067	52.6	-	NHHQ01	157	2583	2486	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972021	GCA_002170915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/915/GCA_002170915.1_ASM217091v1	-	-
Euryarchaeota archaeon TMED164	1986687	PRJNA385857	385857	Euryarchaeota	unclassified Euryarchaeota	1.28561	47	-	NHHN01	55	1181	1134	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972018	GCA_002170935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/935/GCA_002170935.1_ASM217093v1	-	-
Flavobacteriaceae bacterium TMED171	1986706	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	1.19868	35	-	NHHU01	17	1106	974	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972025	GCA_002170965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/965/GCA_002170965.1_ASM217096v1	-	-
Rhizobiales bacterium TMED162	1986850	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.90319	49.6	-	NHHL01	147	1910	1868	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972016	GCA_002170955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/955/GCA_002170955.1_ASM217095v1	-	-
Gammaproteobacteria bacterium TMED159	1986738	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	1.01123	32.9	-	NHHI01	37	1109	1054	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972013	GCA_002170995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/995/GCA_002170995.1_ASM217099v1	-	-
Candidatus Pelagibacter sp. TMED166	1986805	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.846875	30.1	-	NHHP01	7	861	821	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972020	GCA_002171015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/015/GCA_002171015.1_ASM217101v1	-	-
Candidatus Pelagibacter sp. TMED165	1986804	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.742185	28.6	-	NHHO01	44	811	764	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972019	GCA_002171035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/035/GCA_002171035.1_ASM217103v1	-	-
Opitutales bacterium TMED158	1986794	PRJNA385857	385857	PVC group	Verrucomicrobia	2.13326	56	-	NHHH01	86	1866	1830	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972012	GCA_002171045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/045/GCA_002171045.1_ASM217104v1	-	-
Pelagibacteraceae bacterium TMED146	1986802	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.879149	30.6	-	NHGV01	13	943	900	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972000	GCA_002171085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/085/GCA_002171085.1_ASM217108v1	-	-
Planctomycetaceae bacterium TMED138	1986834	PRJNA385857	385857	PVC group	Planctomycetes	2.01398	49	-	NHGN01	47	1655	1597	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971992	GCA_002171115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/115/GCA_002171115.1_ASM217111v1	-	-
bacterium TMED161	1986652	PRJNA385857	385857	unclassified Bacteria	unclassified Bacteria (miscellaneous)	1.22382	30.8	-	NHHK01	29	1109	1036	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972015	GCA_002171125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/125/GCA_002171125.1_ASM217112v1	-	-
Betaproteobacteria bacterium TMED156	1986667	PRJNA385857	385857	Proteobacteria	Betaproteobacteria	1.95684	34.9	-	NHHF01	145	2050	1997	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972010	GCA_002171155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/155/GCA_002171155.1_ASM217115v1	-	-
Gammaproteobacteria bacterium TMED134	1986736	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	3.48737	55.8	-	NHGJ01	79	3299	3194	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971988	GCA_002171175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/175/GCA_002171175.1_ASM217117v1	-	-
Flavobacteriaceae bacterium TMED145	1986704	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	1.21806	30.3	-	NHGU01	37	1184	1120	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971999	GCA_002171195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/195/GCA_002171195.1_ASM217119v1	-	-
Pelagibacteraceae bacterium TMED136	1986800	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.892339	28.9	-	NHGL01	21	968	921	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971990	GCA_002171215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/215/GCA_002171215.1_ASM217121v1	-	-
Crocinitomicaceae bacterium TMED135	1986673	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	1.65651	29.8	-	NHGK01	67	1533	1484	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971989	GCA_002171225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/225/GCA_002171225.1_ASM217122v1	-	-
Rickettsiales bacterium TMED131	1986867	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.4185	34.6	-	NHGG01	112	1530	1493	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971985	GCA_002171235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/235/GCA_002171235.1_ASM217123v1	-	-
Pelagibacteraceae bacterium TMED124	1986798	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.18894	29.7	-	NHFZ01	43	1301	1266	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971978	GCA_002171275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/275/GCA_002171275.1_ASM217127v1	-	-
Gammaproteobacteria bacterium TMED119	1986671	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	1.39915	46.6	-	NHFU01	15	1451	1405	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971973	GCA_002171305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/305/GCA_002171305.1_ASM217130v1	-	-
Flavobacteriaceae bacterium TMED121	1986703	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	1.61936	33.8	-	NHFW01	40	1478	1419	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971975	GCA_002171295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/295/GCA_002171295.1_ASM217129v1	-	-
Euryarchaeota archaeon TMED117	1986683	PRJNA385857	385857	Euryarchaeota	unclassified Euryarchaeota	2.09754	42.5	-	NHFS01	137	1921	1848	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971971	GCA_002171315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/315/GCA_002171315.1_ASM217131v1	-	-
Rhodobacteraceae bacterium TMED111	1986859	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	2.28723	39.2	-	NHFM01	109	2330	2276	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971965	GCA_002171355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/355/GCA_002171355.1_ASM217135v1	-	-
Alphaproteobacteria bacterium TMED109	1986625	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.35491	29.5	-	NHFK01	35	1423	1384	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971963	GCA_002171375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/375/GCA_002171375.1_ASM217137v1	-	-
Rhodothermaceae bacterium TMED105	1986665	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	1.24095	47.2	-	NHFG01	12	1146	1096	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971959	GCA_002171395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/395/GCA_002171395.1_ASM217139v1	-	-
Opitutae bacterium TMED102	1986876	PRJNA385857	385857	PVC group	Verrucomicrobia	2.6541	54.9	-	NHFD01	183	2204	2122	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971956	GCA_002171405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/405/GCA_002171405.1_ASM217140v1	-	-
Alteromonadaceae bacterium TMED101	1986649	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	1.96057	52.6	-	NHFC01	97	1868	1818	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971955	GCA_002171435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/435/GCA_002171435.1_ASM217143v1	-	-
Euryarchaeota archaeon TMED97	1986697	PRJNA385857	385857	Euryarchaeota	unclassified Euryarchaeota	1.63265	35.6	-	NHEY01	44	1531	1480	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971951	GCA_002171445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/445/GCA_002171445.1_ASM217144v1	-	-
Flavobacteriales bacterium TMED96	1986730	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	1.27388	30.1	-	NHEX01	23	1242	1159	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971950	GCA_002171475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/475/GCA_002171475.1_ASM217147v1	-	-
Alphaproteobacteria bacterium TMED93	1986648	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.57229	29.4	-	NHEU01	82	1739	1665	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971947	GCA_002171495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/495/GCA_002171495.1_ASM217149v1	-	-
bacterium TMED88	1986661	PRJNA385857	385857	unclassified Bacteria	unclassified Bacteria (miscellaneous)	5.15907	56.2	-	NHEP01	266	4448	4337	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971942	GCA_002171515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/515/GCA_002171515.1_ASM217151v1	-	-
Rhizobiales bacterium TMED83	1986857	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.79237	55.1	-	NHEK01	60	1768	1699	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971937	GCA_002171535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/535/GCA_002171535.1_ASM217153v1	-	-
Alphaproteobacteria bacterium TMED87	1986646	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	2.0806	35.3	-	NHEO01	114	2025	1977	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971941	GCA_002171525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/525/GCA_002171525.1_ASM217152v1	-	-
Flavobacteriaceae bacterium TMED81	1986719	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	1.66567	42.1	-	NHEI01	71	1667	1545	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971935	GCA_002171575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/575/GCA_002171575.1_ASM217157v1	-	-
Acidimicrobiaceae bacterium TMED77	1986623	PRJNA385857	385857	Terrabacteria group	Actinobacteria	1.39397	42.9	-	NHEE01	16	1393	1357	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971931	GCA_002171605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/605/GCA_002171605.1_ASM217160v1	-	-
Cellvibrionales bacterium TMED79	1986768	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	2.2094	51.7	-	NHEG01	117	2108	2028	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971933	GCA_002171595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/595/GCA_002171595.1_ASM217159v1	-	-
Gammaproteobacteria bacterium TMED78	1986767	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	1.5739	34.5	-	NHEF01	28	1618	1569	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971932	GCA_002171615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/615/GCA_002171615.1_ASM217161v1	-	-
Planctomycetes bacterium TMED75	1986837	PRJNA385857	385857	PVC group	Planctomycetes	2.97523	58.6	-	NHEC01	125	2513	2448	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971929	GCA_002171655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/655/GCA_002171655.1_ASM217165v1	-	-
Chloroflexi bacterium TMED70	1986676	PRJNA385857	385857	Terrabacteria group	Chloroflexi	1.32916	31	-	NHDX01	47	1378	1323	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971924	GCA_002171675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/675/GCA_002171675.1_ASM217167v1	-	-
Candidatus Pelagibacter sp. TMED64	1986830	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.78759	31.1	-	NHDR01	86	1974	1915	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971918	GCA_002171705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/705/GCA_002171705.1_ASM217170v1	-	-
Saprospirales bacterium TMED214	1986670	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	3.66417	49.6	-	NHJL01	285	3082	2999	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972068	GCA_002171755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/755/GCA_002171755.1_ASM217175v1	-	-
Verrucomicrobia bacterium TMED60	1986793	PRJNA385857	385857	PVC group	Verrucomicrobia	2.12879	43	-	NHDN01	67	1776	1685	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971914	GCA_002171765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/765/GCA_002171765.1_ASM217176v1	-	-
Candidatus Puniceispirillum sp. TMED213	1986634	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.26433	45.7	-	NHJK01	44	1243	1199	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972067	GCA_002171775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/775/GCA_002171775.1_ASM217177v1	-	-
Acidimicrobiaceae bacterium TMED210	1986619	PRJNA385857	385857	Terrabacteria group	Actinobacteria	0.737532	32.7	-	NHJH01	49	845	806	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972064	GCA_002171815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/815/GCA_002171815.1_ASM217181v1	-	-
Candidatus Pelagibacter sp. TMED202	1986810	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.647677	30.9	-	NHIZ01	19	747	705	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972056	GCA_002171855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/855/GCA_002171855.1_ASM217185v1	-	-
Flavobacteriaceae bacterium TMED208	1986711	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	1.35438	32.7	-	NHJF01	74	1291	1192	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972062	GCA_002171835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/835/GCA_002171835.1_ASM217183v1	-	-
Candidatus Pelagibacter sp. TMED203	1986811	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.869468	31.2	-	NHJA01	46	949	898	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972057	GCA_002171845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/845/GCA_002171845.1_ASM217184v1	-	-
Alphaproteobacteria bacterium TMED199	1986632	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.00302	30.2	-	NHIW01	49	1062	1001	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972053	GCA_002171895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/895/GCA_002171895.1_ASM217189v1	-	-
Gammaproteobacteria bacterium TMED193	1986744	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	0.480729	34.2	-	NHIQ01	11	516	490	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972047	GCA_002171935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/935/GCA_002171935.1_ASM217193v1	-	-
Alphaproteobacteria bacterium TMED194	1986630	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.3999	32.2	-	NHIR01	84	1593	1525	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972048	GCA_002171915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/915/GCA_002171915.1_ASM217191v1	-	-
Candidatus Pelagibacter sp. TMED196	1986807	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.556608	29.1	-	NHIT01	32	639	609	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972050	GCA_002171925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/925/GCA_002171925.1_ASM217192v1	-	-
Flavobacteriales bacterium TMED191	1986723	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	0.997225	29.6	-	NHIO01	19	941	913	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972045	GCA_002171975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/975/GCA_002171975.1_ASM217197v1	-	-
Cyanobacteria bacterium TMED188	1986678	PRJNA385857	385857	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.35276	59.2	-	NHIL01	64	1528	1474	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972042	GCA_002172015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/015/GCA_002172015.1_ASM217201v1	-	-
Gammaproteobacteria bacterium TMED186	1986743	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	1.47331	32.3	-	NHIJ01	61	1546	1464	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972040	GCA_002172025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/025/GCA_002172025.1_ASM217202v1	-	-
Gammaproteobacteria bacterium TMED183	1986742	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	1.29992	57.5	-	NHIG01	16	1277	1243	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972037	GCA_002172075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/075/GCA_002172075.1_ASM217207v1	-	-
Candidatus Puniceispirillum sp. TMED176	1986629	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.76807	57.7	-	NHHZ01	64	1706	1656	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972030	GCA_002172105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/105/GCA_002172105.1_ASM217210v1	-	-
Verrucomicrobia bacterium TMED175	1986789	PRJNA385857	385857	PVC group	Verrucomicrobia	1.55933	41.2	-	NHHY01	112	1463	1380	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972029	GCA_002172115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/115/GCA_002172115.1_ASM217211v1	-	-
Gammaproteobacteria bacterium TMED182	1986741	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	2.71629	48.8	-	NHIF01	217	2672	2606	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972036	GCA_002172095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/095/GCA_002172095.1_ASM217209v1	-	-
Rickettsiales bacterium TMED174	1986868	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.693402	30.1	-	NHHX01	24	754	722	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972028	GCA_002172145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/145/GCA_002172145.1_ASM217214v1	-	-
Euryarchaeota archaeon TMED173	1986688	PRJNA385857	385857	Euryarchaeota	unclassified Euryarchaeota	0.826841	45.6	-	NHHW01	9	749	726	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972027	GCA_002172185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/185/GCA_002172185.1_ASM217218v1	-	-
Cellvibrionales bacterium TMED157	1986773	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	1.2354	53.2	-	NHHG01	49	1221	1184	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972011	GCA_002172195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/195/GCA_002172195.1_ASM217219v1	-	-
Amoebophilaceae bacterium TMED152	1986680	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	1.09282	30.7	-	NHHB01	18	1103	1049	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972006	GCA_002172215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/215/GCA_002172215.1_ASM217221v1	-	-
Puniceicoccaceae bacterium TMED149	1986788	PRJNA385857	385857	PVC group	Verrucomicrobia	1.01483	39.3	-	NHGY01	20	977	931	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972003	GCA_002172255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/255/GCA_002172255.1_ASM217225v1	-	-
Rhizobiales bacterium TMED143	1986849	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.36221	53.1	-	NHGS01	20	1384	1334	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971997	GCA_002172275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/275/GCA_002172275.1_ASM217227v1	-	-
Candidatus Pelagibacter sp. TMED142	1986801	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.989448	30.9	-	NHGR01	81	1101	1057	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971996	GCA_002172285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/285/GCA_002172285.1_ASM217228v1	-	-
Gammaproteobacteria bacterium TMED139	1986737	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	1.64539	43.6	-	NHGO01	60	1552	1522	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971993	GCA_002172295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/295/GCA_002172295.1_ASM217229v1	-	-
Gammaproteobacteria bacterium TMED133	1986735	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	1.51806	43.4	-	NHGI01	12	1456	1420	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971987	GCA_002172335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/335/GCA_002172335.1_ASM217233v1	-	-
Euryarchaeota archaeon TMED132	1986685	PRJNA385857	385857	Euryarchaeota	unclassified Euryarchaeota	1.81586	40.4	-	NHGH01	66	1668	1573	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971986	GCA_002172355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/355/GCA_002172355.1_ASM217235v1	-	-
Deltaproteobacteria bacterium TMED126	1986843	PRJNA385857	385857	Proteobacteria	delta/epsilon subdivisions	0.82149	30.2	-	NHGB01	7	886	854	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971980	GCA_002172385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/385/GCA_002172385.1_ASM217238v1	-	-
Euryarchaeota archaeon TMED129	1986684	PRJNA385857	385857	Euryarchaeota	unclassified Euryarchaeota	1.40237	36.6	-	NHGE01	75	1351	1307	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971983	GCA_002172375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/375/GCA_002172375.1_ASM217237v1	-	-
Hyphomonadaceae bacterium TMED125	1986775	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	2.21232	55.1	-	NHGA01	9	2117	2080	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971979	GCA_002172415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/415/GCA_002172415.1_ASM217241v1	-	-
Flavobacteriaceae bacterium TMED120	1986702	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	1.44998	40	-	NHFV01	26	1407	1340	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971974	GCA_002172435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/435/GCA_002172435.1_ASM217243v1	-	-
Flavobacteriaceae bacterium TMED116	1986701	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	1.22769	29.9	-	NHFR01	33	1236	1165	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971970	GCA_002172455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/455/GCA_002172455.1_ASM217245v1	-	-
Actinomycetales bacterium TMED115	1986615	PRJNA385857	385857	Terrabacteria group	Actinobacteria	1.41498	62.1	-	NHFQ01	18	1460	1411	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971969	GCA_002172465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/465/GCA_002172465.1_ASM217246v1	-	-
Crocinitomicaceae bacterium TMED114	1986720	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	1.65122	61	-	NHFP01	8	1392	1345	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971968	GCA_002172485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/485/GCA_002172485.1_ASM217248v1	-	-
Alphaproteobacteria bacterium TMED110	1986626	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.23005	45.6	-	NHFL01	68	1242	1182	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971964	GCA_002172515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/515/GCA_002172515.1_ASM217251v1	-	-
Gammaproteobacteria bacterium TMED104	1986732	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	1.69226	36.9	-	NHFF01	45	1822	1702	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971958	GCA_002172535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/535/GCA_002172535.1_ASM217253v1	-	-
Candidatus Marinimicrobia bacterium TMED108	1986777	PRJNA385857	385857	FCB group	Candidatus Marinimicrobia	1.31403	34.9	-	NHFJ01	35	1291	1245	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971962	GCA_002172545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/545/GCA_002172545.1_ASM217254v1	-	-
Euryarchaeota archaeon TMED103	1986682	PRJNA385857	385857	Euryarchaeota	unclassified Euryarchaeota	2.00194	46.5	-	NHFE01	41	1722	1636	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971957	GCA_002172575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/575/GCA_002172575.1_ASM217257v1	-	-
Cellulomonadaceae bacterium TMED98	1986624	PRJNA385857	385857	Terrabacteria group	Actinobacteria	1.03236	59	-	NHEZ01	56	1072	1016	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971952	GCA_002172585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/585/GCA_002172585.1_ASM217258v1	-	-
Gammaproteobacteria bacterium TMED95	1986771	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	2.8696	49.5	-	NHEW01	41	2774	2722	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971949	GCA_002172615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/615/GCA_002172615.1_ASM217261v1	-	-
Verrucomicrobiaceae bacterium TMED86	1986881	PRJNA385857	385857	PVC group	Verrucomicrobia	3.45044	53.9	-	NHEN01	196	2748	2699	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971940	GCA_002172625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/625/GCA_002172625.1_ASM217262v1	-	-
Flavobacteriales bacterium TMED84	1986729	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	1.11409	30.4	-	NHEL01	39	1078	1033	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971938	GCA_002172655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/655/GCA_002172655.1_ASM217265v1	-	-
unicellular cyanobacterium SU3	1982589	PRJNA384303	384303	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.60346	36.8	-	NETF01	208	5535	5104	6/5/17	6/7/17	Scaffold	"Department of Ecology, Environment and Plant Sciences, Stockholm University"	SAMN06833890	GCA_002172675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/675/GCA_002172675.1_croco123Su3	-	SU3
Rhizobiales bacterium TMED227	1986852	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.05939	36.8	-	NHJY01	32	1127	1078	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972081	GCA_002172695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/695/GCA_002172695.1_ASM217269v1	-	-
Oceanospirillaceae bacterium TMED276	1986785	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	1.66613	51.6	-	NHLV01	48	1589	1523	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972130	GCA_002172705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/705/GCA_002172705.1_ASM217270v1	-	-
Gammaproteobacteria bacterium TMED281	1986757	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	0.91868	36.6	-	NHMA01	43	947	919	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972135	GCA_002172715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/715/GCA_002172715.1_ASM217271v1	-	-
Pelagibacteraceae bacterium TMED267	1986823	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.771027	29.4	-	NHLM01	46	833	780	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972121	GCA_002172725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/725/GCA_002172725.1_ASM217272v1	-	-
bacterium TMED274	1986781	PRJNA385857	385857	unclassified Bacteria	unclassified Bacteria (miscellaneous)	0.530171	31.5	-	NHLT01	8	568	547	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972128	GCA_002172775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/775/GCA_002172775.1_ASM217277v1	-	-
bacterium TMED178	1986653	PRJNA385857	385857	unclassified Bacteria	unclassified Bacteria (miscellaneous)	0.892254	37.5	-	NHIB01	10	886	867	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972032	GCA_002172795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/795/GCA_002172795.1_ASM217279v1	-	-
Oceanospirillales bacterium TMED33	1986760	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	2.17963	49.4	-	NHCM01	58	2236	2154	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971887	GCA_002172845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/845/GCA_002172845.1_ASM217284v1	-	-
Rhodospirillaceae bacterium TMED140	1986862	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.74309	63.9	-	NHGP01	50	1534	1492	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971994	GCA_002172855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/855/GCA_002172855.1_ASM217285v1	-	-
Candidatus Endolissoclinum sp. TMED26	1986636	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	2.9977	55.2	-	NHCF01	90	2944	2851	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971880	GCA_002172835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/835/GCA_002172835.1_ASM217283v1	-	-
Gammaproteobacteria bacterium TMED107	1986733	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	2.20105	52.2	-	NHFI01	114	2015	1969	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971961	GCA_002172865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/865/GCA_002172865.1_ASM217286v1	-	-
Alphaproteobacteria bacterium TMED89	1986647	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	2.79089	58.6	-	NHEQ01	195	2554	2494	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971943	GCA_002172925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/925/GCA_002172925.1_ASM217292v1	-	-
Oceanospirillales bacterium TMED91	1986769	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	1.14543	50.6	-	NHES01	55	1216	1185	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971945	GCA_002172995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/995/GCA_002172995.1_ASM217299v1	-	-
Oceanospirillales bacterium TMED59	1986765	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	2.23409	48.8	-	NHDM01	102	2326	2226	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971913	GCA_002173025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/025/GCA_002173025.1_ASM217302v1	-	-
Alteromonadaceae bacterium TMED7	1986650	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	5.40167	47.6	-	NHBM01	177	4961	4728	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971861	GCA_002173075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/075/GCA_002173075.1_ASM217307v1	-	-
Hyphomonadaceae bacterium TMED5	1986776	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	3.55104	54.8	-	NHBK01	27	3411	3332	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971859	GCA_002173095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/095/GCA_002173095.1_ASM217309v1	-	-
Acinetobacter populi	1582270	PRJNA385503	385503	Proteobacteria	Gammaproteobacteria	3.6867	40.2	-	NEXX01	12	3421	3284	6/6/17	6/8/17	Contig	National Institute of Public Health	SAMN06891249	GCA_002174125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/125/GCA_002174125.1_ASM217412v1	-	PBJ7
Solibacillus kalamii	1748298	PRJNA387053	387053	Terrabacteria group	Firmicutes	3.80918	38.6	-	NHNT01	28	3792	3657	6/6/17	6/8/17	Contig	Jet Propulsion Laboratory	SAMN07138902	GCA_002174535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/535/GCA_002174535.1_ASM217453v1	28475026	ISSFR-015
Brucella pinnipedialis	120576	PRJNA243898	243898	Proteobacteria	Alphaproteobacteria	3.33103	57.2716	chromosome 1:NZ_CP007743.1/CP007743.1; chromosome 2:NZ_CP007742.1/CP007742.1	-	2	3400	3205	8/15/14	4/9/17	Complete Genome	Los Alamos National Laboratory	SAMN02781126	GCA_000740275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/275/GCA_000740275.1_ASM74027v1	25237024	6/566
Garciella nitratireducens DSM 15102	1121911	PRJEB19568	376371	Terrabacteria group	Firmicutes	2.16333	30.4	-	FUWV01	26	2183	2031	3/4/17	6/9/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745973	GCA_900167305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/305/GCA_900167305.1_IMG-taxon_2568526006_annotated_assembly	-	DSM 15102
bacterium B13(2017)	1932701	PRJNA360183	360183	unclassified Bacteria	unclassified Bacteria (miscellaneous)	0.837374	29.9	-	MSYA01	186	478	465	6/8/17	6/8/17	Contig	Seoul Nat'l University	SAMN06204667	GCA_002176875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/875/GCA_002176875.1_ASM217687v1	-	-
bacterium F11	1932698	PRJNA360188	360188	unclassified Bacteria	unclassified Bacteria (miscellaneous)	2.00123	44.5	-	MSYE01	259	1607	1550	6/8/17	6/8/17	Scaffold	Seoul Nat'l University	SAMN06204671	GCA_002176905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/905/GCA_002176905.1_ASM217690v1	-	-
archaeon D22	1932700	PRJNA360185	360185	unclassified Archaea	unclassified Archaea (miscellaneous)	0.499102	35.5	-	MSYC01	54	484	474	6/8/17	6/8/17	Contig	Seoul Nat'l University	SAMN06204669	GCA_002176885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/885/GCA_002176885.1_ASM217688v1	-	-
bacterium F16	1932694	PRJNA360189	360189	unclassified Bacteria	unclassified Bacteria (miscellaneous)	0.764259	48.3	-	MSYF01	147	709	693	6/8/17	6/8/17	Scaffold	Seoul Nat'l University	SAMN06204672	GCA_002176965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/965/GCA_002176965.1_ASM217696v1	-	-
bacterium M21	1932697	PRJNA360194	360194	unclassified Bacteria	unclassified Bacteria (miscellaneous)	1.21249	50.2	-	MSYK01	177	1099	1066	6/8/17	6/8/17	Contig	Seoul Nat'l University	SAMN06204677	GCA_002176955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/955/GCA_002176955.1_ASM217695v1	-	-
bacterium I07	1932703	PRJNA360191	360191	unclassified Bacteria	unclassified Bacteria (miscellaneous)	1.08702	44	-	MSYH01	219	1064	1025	6/8/17	6/8/17	Scaffold	Seoul Nat'l University	SAMN06204674	GCA_002176975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/975/GCA_002176975.1_ASM217697v1	-	-
bacterium K02(2017)	1932696	PRJNA360193	360193	unclassified Bacteria	unclassified Bacteria (miscellaneous)	1.35723	34.5	-	MSYJ01	183	1241	1213	6/8/17	6/8/17	Contig	Seoul Nat'l University	SAMN06204676	GCA_002176985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/985/GCA_002176985.1_ASM217698v1	-	-
bacterium B17	1932704	PRJNA360184	360184	unclassified Bacteria	unclassified Bacteria (miscellaneous)	0.815667	46.2	-	MSYB01	158	810	777	6/8/17	6/8/17	Contig	Seoul Nat'l University	SAMN06204668	GCA_002177035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/035/GCA_002177035.1_ASM217703v1	-	-
bacterium E08(2017)	1932693	PRJNA360187	360187	unclassified Bacteria	unclassified Bacteria (miscellaneous)	1.40984	47.9	-	MSYD01	136	1319	1269	6/8/17	6/8/17	Scaffold	Seoul Nat'l University	SAMN06204670	GCA_002177045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/045/GCA_002177045.1_ASM217704v1	-	-
bacterium G20	1932699	PRJNA360190	360190	unclassified Bacteria	unclassified Bacteria (miscellaneous)	0.441809	47	-	MSYG01	91	535	493	6/8/17	6/8/17	Contig	Seoul Nat'l University	SAMN06204673	GCA_002177075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/075/GCA_002177075.1_ASM217707v1	-	-
bacterium J17	1932695	PRJNA360192	360192	unclassified Bacteria	unclassified Bacteria (miscellaneous)	0.552101	46	-	MSYI01	93	546	528	6/8/17	6/8/17	Scaffold	Seoul Nat'l University	SAMN06204675	GCA_002177085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/085/GCA_002177085.1_ASM217708v1	-	-
Salinicola salarius	430457	PRJNA379806	379806	Proteobacteria	Gammaproteobacteria	4.28557	62.4	-	NHOU01	164	3883	3662	6/8/17	6/10/17	Contig	Zhejiang University of Technology	SAMN06621520	GCA_002179555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/555/GCA_002179555.1_ASM217955v1	-	1A01339
Paraburkholderia piptadeniae	1701573	PRJEB10535	328330	Proteobacteria	Betaproteobacteria	9.71005	62.3	-	CYGY02	281	8959	8383	7/8/16	6/10/17	Scaffold	IRD	SAMEA3513432	GCA_900007165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/165/GCA_900007165.2_BN2476-7183	-	STM 7183
Brucella suis	29461	PRJNA244013	244013	Proteobacteria	Alphaproteobacteria	3.3197	57.2716	chromosome 1:NZ_CP007717.1/CP007717.1; chromosome 2:NZ_CP007716.1/CP007716.1	-	2	3349	3165	8/15/14	4/2/17	Complete Genome	Los Alamos National Laboratory	SAMN02780910	GCA_000740235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/235/GCA_000740235.1_ASM74023v1	25237024	513UK
Fusicatenibacter sp. 2789STDY5834925	1806509	PRJEB10915	297013	Terrabacteria group	Firmicutes	7.92766	46.6	-	CZBC01	80	7101	6846	10/1/15	6/10/17	Scaffold	SC	SAMEA3545388	GCA_002180435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/435/GCA_002180435.1_14207_7_48	-	2789STDY5834925
Kiloniella majae	1938558	PRJNA347280	347280	Proteobacteria	Alphaproteobacteria	4.4576	45.4	-	MTSX01	25	4160	4087	5/5/17	6/21/17	Contig	Universidad de Santiago de Compostela	SAMN05878524	GCA_002118275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/118/275/GCA_002118275.1_ASM211827v1	-	M146.1
Paenibacillus apiarius	46240	PRJNA382554	382554	Terrabacteria group	Firmicutes	5.40482	50.5	-	NDGJ01	51	4840	4586	5/31/17	6/2/17	Contig	Cornell University	SAMN06710092	GCA_002161865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/865/GCA_002161865.1_ASM216186v1	-	NRRL B-23460
Paenibacillus thiaminolyticus	49283	PRJNA382555	382555	Terrabacteria group	Firmicutes	6.53738	53.6	-	NDGK01	47	5829	5537	5/31/17	6/2/17	Contig	Cornell University	SAMN06710091	GCA_002161855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/855/GCA_002161855.1_ASM216185v1	-	NRRL B-4156
Brucella ceti TE10759-12	1423891	PRJNA227977	227977	Proteobacteria	Alphaproteobacteria	3.27803	57.2708	chromosome I:NC_022905.1/CP006896.1; chromosome II:NC_022906.1/CP006897.1	-	2	3361	3112	11/25/13	4/2/17	Complete Genome	CRS4	SAMN02402452	GCA_000590795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/795/GCA_000590795.1_ASM59079v1	24604638	TE10759-12
Armatimonadetes bacterium Uphvl-Ar1	2004467	PRJNA385759	385759	Terrabacteria group	Armatimonadetes	2.98555	52.5	chromosome:CP021423.1	-	1	3131	3009	5/31/17	5/31/17	Chromosome	Universitaet Potsdam	SAMN06947392	GCA_002162075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/075/GCA_002162075.1_ASM216207v1	-	Uphvl-Ar1
Armatimonadetes bacterium Uphvl-Ar2	2004468	PRJNA385759	385759	Terrabacteria group	Armatimonadetes	2.63354	62.1	chromosome:CP021424.1	-	1	2644	2537	5/31/17	5/31/17	Chromosome	Universitaet Potsdam	SAMN06947393	GCA_002162095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/095/GCA_002162095.1_ASM216209v1	-	Uphvl-Ar2
Klebsiella pneumoniae	573	PRJNA329409	329409	Proteobacteria	Gammaproteobacteria	5.52615	57.2691	chromosome:NZ_CP018692.1/CP018692.1; plasmid pKp_Goe_588-1:NZ_CP018693.1/CP018693.1; plasmid pKp_Goe_588-2:NZ_CP018694.1/CP018694.1	-	3	5575	5286	12/19/16	2/22/17	Complete Genome	University Medical Center Goettingen	SAMN05412457	GCA_001908895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/895/GCA_001908895.1_ASM190889v1	-	Kp_Goe_821588
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA251378	251378	Proteobacteria	Gammaproteobacteria	5.48415	57.2625	chromosome:NZ_CP009872.1/CP009872.1; plasmid pKPN-294:NZ_CP009873.1/CP009873.1; plasmid pKPN-b9c:NZ_CP009874.1/CP009874.1; plasmid pKpQIL-531:NZ_CP009875.1/CP009875.1	-	4	5575	5346	11/17/14	2/21/17	Complete Genome	NIH	SAMN02820977	GCA_000784985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/985/GCA_000784985.1_ASM78498v1	25232178	KPNIH30
Flavobacteriales bacterium 33_180_T64	1856290	PRJNA320927	320927	FCB group	Bacteroidetes/Chlorobi group	3.7522	32.1	-	MAAQ01	23	3329	3282	5/31/17	5/31/17	Scaffold	Lawrence Berkeley National Lab	SAMN05179564	GCA_002162685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/685/GCA_002162685.1_ASM216268v1	28652349	-
Gammaproteobacteria bacterium 50_400_T64	1856294	PRJNA320927	320927	Proteobacteria	Gammaproteobacteria	3.05425	50	-	MAAS01	31	2767	2711	5/31/17	5/31/17	Scaffold	Lawrence Berkeley National Lab	SAMN05179566	GCA_002162755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/755/GCA_002162755.1_ASM216275v1	28652349	-
Flavobacteriales bacterium 34_180_T64	1856291	PRJNA320927	320927	FCB group	Bacteroidetes/Chlorobi group	3.15639	33.5	-	MAAR01	19	2776	2731	5/31/17	5/31/17	Contig	Lawrence Berkeley National Lab	SAMN05179565	GCA_002162765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/765/GCA_002162765.1_ASM216276v1	28652349	-
Rhodobacterales bacterium 56_14_T64	1856299	PRJNA320927	320927	Proteobacteria	Alphaproteobacteria	4.33587	56.4	-	MAAY01	111	4208	4044	5/31/17	5/31/17	Scaffold	Lawrence Berkeley National Lab	SAMN05179572	GCA_002162795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/795/GCA_002162795.1_ASM216279v1	28652349	-
Gammaproteobacteria bacterium 54_18_T64	1856296	PRJNA320927	320927	Proteobacteria	Gammaproteobacteria	2.27669	53.3	-	MAAU01	98	2100	2062	5/31/17	5/31/17	Scaffold	Lawrence Berkeley National Lab	SAMN05179568	GCA_002162825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/825/GCA_002162825.1_ASM216282v1	28652349	-
Gammaproteobacteria bacterium 53_120_T64	1856295	PRJNA320927	320927	Proteobacteria	Gammaproteobacteria	2.94912	53.2	-	MAAT01	76	2675	2620	5/31/17	5/31/17	Scaffold	Lawrence Berkeley National Lab	SAMN05179567	GCA_002162815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/815/GCA_002162815.1_ASM216281v1	28652349	-
Rhodobacterales bacterium 52_120_T64	1856301	PRJNA320927	320927	Proteobacteria	Alphaproteobacteria	3.41732	51.8	-	MABA01	26	3407	3320	5/31/17	5/31/17	Contig	Lawrence Berkeley National Lab	SAMN05179574	GCA_002162875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/875/GCA_002162875.1_ASM216287v1	28652349	-
Rhodobacterales bacterium 59_46_T64	1856300	PRJNA320927	320927	Proteobacteria	Alphaproteobacteria	3.56793	58.8	-	MAAZ01	23	3404	3319	5/31/17	5/31/17	Scaffold	Lawrence Berkeley National Lab	SAMN05179573	GCA_002162885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/885/GCA_002162885.1_ASM216288v1	28652349	-
Rhodospirillales bacterium 47_12_T64	1856302	PRJNA320927	320927	Proteobacteria	Alphaproteobacteria	1.47647	46.5	-	MABB01	134	1474	1358	5/31/17	5/31/17	Scaffold	Lawrence Berkeley National Lab	SAMN05179575	GCA_002162915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/915/GCA_002162915.1_ASM216291v1	28652349	-
Gammaproteobacteria bacterium 45_16_T64	1856297	PRJNA320927	320927	Proteobacteria	Gammaproteobacteria	6.48628	44.7	-	MABD01	58	5566	5483	5/31/17	5/31/17	Scaffold	Lawrence Berkeley National Lab	SAMN05179577	GCA_002162955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/955/GCA_002162955.1_ASM216295v1	28652349	-
Bermanella sp. 47_1433_sub80_T6	1856278	PRJNA320927	320927	Proteobacteria	Gammaproteobacteria	2.54055	47.4	-	MAAD01	350	2515	2433	5/31/17	5/31/17	Scaffold	Lawrence Berkeley National Lab	SAMN05179551	GCA_002162985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/985/GCA_002162985.1_ASM216298v1	28652349	-
'Osedax' symbiont bacterium Rs2_46_30_T18	1856298	PRJNA320927	320927	unclassified Bacteria	unclassified Bacteria (miscellaneous)	4.02183	45.8	-	MABF01	365	3751	3665	5/31/17	5/31/17	Scaffold	Lawrence Berkeley National Lab	SAMN05179579	GCA_002163025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/025/GCA_002163025.1_ASM216302v1	28652349	-
Alphaproteobacteria bacterium 46_93_T64	1856292	PRJNA320927	320927	Proteobacteria	Alphaproteobacteria	4.00235	45.6	-	MAAN01	41	3755	3697	5/31/17	5/31/17	Scaffold	Lawrence Berkeley National Lab	SAMN05179561	GCA_002163135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/135/GCA_002163135.1_ASM216313v1	28652349	-
Gammaproteobacteria bacterium 42_54_T18	1856293	PRJNA320927	320927	Proteobacteria	Gammaproteobacteria	6.66463	42.6	-	MAAL01	199	5706	5589	5/31/17	5/31/17	Scaffold	Lawrence Berkeley National Lab	SAMN05179559	GCA_002163245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/245/GCA_002163245.1_ASM216324v1	28652349	-
Brachybacterium massiliense	1755098	PRJEB13137	316094	Terrabacteria group	Actinobacteria	3.86549	70.6	-	FXXB01	8	3574	3372	5/23/17	6/4/17	Contig	URMITE	SAMEA104087843	GCA_900184245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/184/245/GCA_900184245.1_PRJEB13137	-	mt5
Vibrio mangrovi	474394	PRJEB19892	385793	Proteobacteria	Gammaproteobacteria	4.94461	45.6	-	FXXI01	31	4387	4246	5/24/17	6/4/17	Contig	UVEG	SAMEA103894552	GCA_900184095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/184/095/GCA_900184095.1_Vmangrovi_CECT7927_Spades_Prokka	-	CECT 7927
Klebsiella pneumoniae	573	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.53733	57.2608	chromosome:CP023502.1; plasmid unnamed:CP023503.1	-	2	5632	5344	9/28/17	9/28/17	Complete Genome	US Food and Drug Administration 	SAMN07312489	GCA_002386225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/225/GCA_002386225.1_ASM238622v1	-	FDAARGOS_445
Gilvibacter sp. SZ-19	754429	PRJNA357132	357132	FCB group	Bacteroidetes/Chlorobi group	3.10021	43.6	chromosome:NZ_CP019333.1/CP019333.1	-	1	2879	2812	6/2/17	6/5/17	Chromosome	"Atmosphere and Ocean Research Institute, The University of Tokyo"	SAMN06133352	GCA_002163875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/875/GCA_002163875.1_ASM216387v1	-	SZ-19
Klebsiella pneumoniae	573	PRJNA306571	306571	Proteobacteria	Gammaproteobacteria	5.40687	57.2556	chromosome:NZ_CP013711.1/CP013711.1; plasmid 1:NZ_CP013712.1/CP013712.1; plasmid 2:NZ_CP013713.1/CP013713.1	-	3	5408	5100	12/24/15	2/21/17	Complete Genome	State Key Laboratory of Urban Water Resource and Environment	SAMN04357099	GCA_001482345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/345/GCA_001482345.1_ASM148234v1	-	J1
Neiella marina	508461	PRJNA386578	386578	Proteobacteria	Gammaproteobacteria	4.24779	48.7	-	NGNS01	53	3717	3624	6/2/17	6/5/17	Contig	Shandong University at Weihai	SAMN07071616	GCA_002165625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/625/GCA_002165625.1_ASM216562v1	-	J221
Candidatus Homeothermus arabinoxylanisolvens	2005518	PRJNA313232	313232	FCB group	Bacteroidetes/Chlorobi group	2.82115	50.3	-	LUJO01	60	-	-	7/20/16	7/20/16	Scaffold	University of Queensland	SAMN04517339	GCA_001689405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/405/GCA_001689405.1_ASM168940v1	27388460	-
Pseudomonas floridae	1958950	PRJNA368985	368985	Proteobacteria	Gammaproteobacteria	6.10371	59.2	-	MUIO01	287	5702	5351	4/12/17	6/13/17	Scaffold	University of Florida	SAMN06275483	GCA_002087235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/235/GCA_002087235.1_ASM208723v1	-	GEV388
Caballeronia mineralivorans PML1(12)	908627	PRJNA53985	53985	Proteobacteria	Betaproteobacteria	9.36825	60.1	-	AEJF01	377	8734	8198	6/15/15	6/13/17	Contig	INRA	SAMN03768919	GCA_001028175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/175/GCA_001028175.1_ASM102817v1	26205858	PML1(12)
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA251380	251380	Proteobacteria	Gammaproteobacteria	5.47358	57.2555	chromosome:NZ_CP009876.1/CP009876.1; plasmid pAAC154-a9e:NZ_CP009877.1/CP009877.1; plasmid pKPN-852:NZ_CP009878.1/CP009878.1; plasmid pKPN-c22:NZ_CP009879.1/CP009879.1	-	4	5488	5201	11/17/14	2/21/17	Complete Genome	NIH	SAMN02820980	GCA_000785005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/005/GCA_000785005.1_ASM78500v1	25232178	KPNIH31
Rhodobacteraceae bacterium WFHF2C18	1928334	PRJNA386638	386638	Proteobacteria	Alphaproteobacteria	3.36184	67.5	-	NHTQ01	12	3316	3212	6/5/17	6/7/17	Contig	Shandong University at Weihai	SAMN07115005	GCA_002166865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/865/GCA_002166865.1_ASM216686v1	-	WFHF2C18
Planomicrobium flavidum	569883	PRJNA387663	387663	Terrabacteria group	Firmicutes	3.0325	53.5	-	NHTN01	83	3117	2979	6/5/17	6/15/17	Contig	institute of microbial technology	SAMN07160567	GCA_002167005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/005/GCA_002167005.1_ASM216700v1	-	S5-TSA-19
Pelagibacteraceae bacterium TMED65	1986644	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.68987	29.9	-	NHDS01	36	1772	1720	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971919	GCA_002167215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/215/GCA_002167215.1_ASM216721v1	-	-
Verrucomicrobia bacterium TMED56	1986792	PRJNA385857	385857	PVC group	Verrucomicrobia	2.47968	41	-	NHDJ01	148	2238	2129	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971910	GCA_002167265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/265/GCA_002167265.1_ASM216726v1	-	-
Planctomycetia bacterium TMED53	1986839	PRJNA385857	385857	PVC group	Planctomycetes	2.98083	52.3	-	NHDG01	125	2452	2334	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971907	GCA_002167285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/285/GCA_002167285.1_ASM216728v1	-	-
Alphaproteobacteria bacterium TMED54	1986640	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	2.10078	28.7	-	NHDH01	87	2225	2141	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971908	GCA_002167275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/275/GCA_002167275.1_ASM216727v1	-	-
Gammaproteobacteria bacterium TMED50	1986763	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	3.71429	54.9	-	NHDD01	36	3735	3609	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971904	GCA_002167305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/305/GCA_002167305.1_ASM216730v1	-	-
bacterium TMED46	1986782	PRJNA385857	385857	unclassified Bacteria	unclassified Bacteria (miscellaneous)	2.04836	35.7	-	NHCZ01	31	1842	1750	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971900	GCA_002167345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/345/GCA_002167345.1_ASM216734v1	-	-
Betaproteobacteria bacterium TMED41	1986668	PRJNA385857	385857	Proteobacteria	Betaproteobacteria	1.92374	35.7	-	NHCU01	79	1893	1842	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971895	GCA_002167365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/365/GCA_002167365.1_ASM216736v1	-	-
Rhizobiales bacterium TMED28	1986855	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.51928	36.4	-	NHCH01	26	1560	1484	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971882	GCA_002167385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/385/GCA_002167385.1_ASM216738v1	-	-
Rhodobacteraceae bacterium TMED38	1986861	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	2.54318	40	-	NHCR01	80	2558	2481	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971892	GCA_002167375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/375/GCA_002167375.1_ASM216737v1	-	-
bacterium TMED6	1986783	PRJNA385857	385857	unclassified Bacteria	unclassified Bacteria (miscellaneous)	1.47939	28.2	-	NHBL01	53	1428	1353	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971860	GCA_002167465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/465/GCA_002167465.1_ASM216746v1	-	-
Flavobacteriaceae bacterium TMED68	1986718	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	1.75649	31	-	NHDV01	29	1679	1582	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971922	GCA_002167525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/525/GCA_002167525.1_ASM216752v1	-	-
Cellvibrionales bacterium TMED48	1986842	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	2.09381	42.2	-	NHDC01	85	1986	1932	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971903	GCA_002167535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/535/GCA_002167535.1_ASM216753v1	-	-
Deltaproteobacteria bacterium TMED58	1986674	PRJNA385857	385857	Proteobacteria	delta/epsilon subdivisions	1.28137	31.9	-	NHDL01	26	1339	1274	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971912	GCA_002167555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/555/GCA_002167555.1_ASM216755v1	-	-
Crocinitomicaceae bacterium TMED45	1986728	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	2.38518	53.4	-	NHCY01	41	2168	2085	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971899	GCA_002167585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/585/GCA_002167585.1_ASM216758v1	-	-
Verrucomicrobia bacterium TMED40	1986790	PRJNA385857	385857	PVC group	Verrucomicrobia	2.49489	47.3	-	NHCT01	66	2098	2004	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971894	GCA_002167605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/605/GCA_002167605.1_ASM216760v1	-	-
Bacteroidetes bacterium TMED39	1986664	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	1.60113	35.7	-	NHCS01	8	1471	1436	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971893	GCA_002167615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/615/GCA_002167615.1_ASM216761v1	-	-
Candidatus Endolissoclinum sp. TMED37	1986638	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	5.18614	39.5	-	NHCQ01	293	5308	5186	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971891	GCA_002167635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/635/GCA_002167635.1_ASM216763v1	-	-
Gammaproteobacteria bacterium TMED34	1986761	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	3.55286	51.3	-	NHCN01	71	3364	3287	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971888	GCA_002167665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/665/GCA_002167665.1_ASM216766v1	-	-
Flammeovirgaceae bacterium TMED32	1986681	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	3.34025	38.9	-	NHCL01	159	2993	2844	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971886	GCA_002167685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/685/GCA_002167685.1_ASM216768v1	-	-
Rhizobiales bacterium TMED29	1986856	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.65225	55.4	-	NHCI01	50	1688	1603	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971883	GCA_002167695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/695/GCA_002167695.1_ASM216769v1	-	-
Betaproteobacteria bacterium TMED22	1986845	PRJNA385857	385857	Proteobacteria	Betaproteobacteria	1.88116	44.1	-	NHCB01	17	1879	1819	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971876	GCA_002167745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/745/GCA_002167745.1_ASM216774v1	-	-
Cellvibrionales bacterium TMED21	1986745	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	2.32562	52.8	-	NHCA01	35	2177	2097	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971875	GCA_002167765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/765/GCA_002167765.1_ASM216776v1	-	-
Crocinitomicaceae bacterium TMED16	1986722	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	2.45861	37.8	-	NHBV01	49	2193	2101	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971870	GCA_002167775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/775/GCA_002167775.1_ASM216777v1	-	-
Owenweeksia sp. TMED14	1986609	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	1.7201	36	-	NHBT01	32	1554	1496	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971868	GCA_002167805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/805/GCA_002167805.1_ASM216780v1	-	-
Pelagibacteraceae bacterium TMED13	1986627	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	1.34754	29.5	-	NHBS01	54	1506	1356	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971867	GCA_002167825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/825/GCA_002167825.1_ASM216782v1	-	-
Phycisphaera sp. TMED9	1986611	PRJNA385857	385857	PVC group	Planctomycetes	3.64616	62	-	NHBO01	121	3040	2947	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971863	GCA_002167845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/845/GCA_002167845.1_ASM216784v1	-	-
Klebsiella pneumoniae	573	PRJNA246471	246471	Proteobacteria	Gammaproteobacteria	5.55249	57.2436	chromosome:NZ_CP011578.1/CP011578.1; plasmid pCAV1392-131:NZ_CP011577.1/CP011577.1; plasmid pCAV1392-50:NZ_CP011576.1/CP011576.1; plasmid pKPC_CAV1392:NZ_CP011575.1/CP011575.1	-	4	5626	5354	6/9/15	2/21/17	Complete Genome	University of Oxford	SAMN03024610	GCA_001022035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/035/GCA_001022035.1_ASM102203v1	-	CAV1392
Brucella suis	29461	PRJNA244262	244262	Proteobacteria	Alphaproteobacteria	3.31386	57.2426	chromosome 1:NZ_CP008757.1/CP008757.1; chromosome 2:NZ_CP008756.1/CP008756.1	-	2	3357	3153	8/15/14	4/2/17	Complete Genome	Los Alamos National Laboratory	SAMN02787065	GCA_000740435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/435/GCA_000740435.1_ASM74043v1	25237024	BSP
Tenacibaculum holothuriorum	1635173	PRJNA279452	279452	FCB group	Bacteroidetes/Chlorobi group	3.14765	31	-	LAPZ01	31	2935	2870	5/9/17	5/22/17	Contig	The Third Institute of State Oceanic Administration	SAMN03447969	GCA_002120225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/225/GCA_002120225.1_ASM212022v1	-	S2-2
Chitinophagaceae bacterium IBVUCB1	1985173	PRJNA384425	384425	FCB group	Bacteroidetes/Chlorobi group	3.41217	42.7	-	NFUW01	2	3106	3048	5/10/17	5/22/17	Scaffold	University of Oslo	SAMN06840505	GCA_002127285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/285/GCA_002127285.1_ASM212728v1	-	IBVUCB1
Chitinophagaceae bacterium IBVUCB2	1985174	PRJNA384425	384425	FCB group	Bacteroidetes/Chlorobi group	3.99883	38.4	-	NFUV01	3	3593	3527	5/10/17	5/22/17	Scaffold	University of Oslo	SAMN06840506	GCA_002127295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/295/GCA_002127295.1_ASM212729v1	-	IBVUCB2
Calditrichaeota bacterium AABM5.125.24	1960894	PRJNA305566	305566	Calditrichaeota	unclassified Calditrichaeota	2.81649	55.8	-	MWJR01	360	-	-	5/11/17	5/11/17	Scaffold	Aarhus University	SAMN06319394	GCA_002127415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/415/GCA_002127415.1_ASM212741v1	28488795	-
Calditrichaeota bacterium AABM5.25.91	1960895	PRJNA305566	305566	Calditrichaeota	unclassified Calditrichaeota	3.52099	40.5	-	MWJS01	1527	-	-	5/11/17	5/11/17	Contig	Aarhus University	SAMN06319396	GCA_002127425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/425/GCA_002127425.1_ASM212742v1	28488795	-
Xenorhabdus vietnamensis	351656	PRJNA328550	328550	Proteobacteria	Gammaproteobacteria	4.66639	43	-	MUBJ01	149	4071	3706	5/11/17	5/22/17	Scaffold	Goethe University	SAMN05375056	GCA_002127535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/535/GCA_002127535.1_ASM212753v1	-	DSM 22392
Xenorhabdus beddingii	40578	PRJNA328549	328549	Proteobacteria	Gammaproteobacteria	4.09685	45.2	-	MUBK01	210	3777	3490	5/11/17	5/22/17	Scaffold	Goethe University	SAMN05375051	GCA_002127545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/545/GCA_002127545.1_ASM212754v1	-	DSM 4764
Alloscardovia macacae	1160091	PRJNA383345	383345	Terrabacteria group	Actinobacteria	1.82395	56.1	-	NEKC01	40	1542	1469	5/11/17	5/22/17	Contig	University of Massachusetts	SAMN06761564	GCA_002127695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/695/GCA_002127695.1_ASM212769v1	-	UMA81212
Klebsiella pneumoniae JM45	1380908	PRJNA213804	213804	Proteobacteria	Gammaproteobacteria	5.60317	57.2405	chromosome:NC_022082.1/CP006656.1; plasmid p1:NC_022078.1/CP006657.1; plasmid p2:NC_022083.1/CP006658.1	-	3	5670	5284	8/12/13	2/21/17	Complete Genome	"Microbiology Laboratory, Hangzhou Yuhang Hospital of Traditional Chinese Medicine, Hangzhou, PR China"	SAMN02603607	GCA_000445405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/405/GCA_000445405.1_ASM44540v1	-	-
Bacillus acidiceler	371036	PRJNA380449	380449	Terrabacteria group	Firmicutes	4.77062	32.8	-	NESS01	45	4644	4452	5/11/17	6/15/17	Scaffold	Northeast Agricultural University	SAMN06843740	GCA_002128425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/425/GCA_002128425.1_ASM212842v1	-	DSM 18954
Plantibacter elymi	199708	PRJEB20279	381730	Terrabacteria group	Actinobacteria	4.12248	69.2	-	FXWJ01	8	3854	3765	5/13/17	5/24/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06295909	GCA_900177795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/795/GCA_900177795.1_IMG-taxon_2708742472_annotated_assembly	-	VKM Ac-1784
Devosia lucknowensis	1096929	PRJEB20274	381737	Proteobacteria	Alphaproteobacteria	3.71966	62.9	-	FXWK01	3	3629	3538	5/13/17	5/24/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06295905	GCA_900177655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/655/GCA_900177655.1_IMG-taxon_2708742467_annotated_assembly	-	L15
Xenorhabdus innexi	290109	PRJEB17839	360707	Proteobacteria	Gammaproteobacteria	4.50778	43.7	-	FTLG01	69	4085	3763	1/10/17	5/31/17	Scaffold	UMR 1333 DGIMI	SAMEA37048168	GCA_900155355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/355/GCA_900155355.1_ASM90015535v1	-	HGB1681 (deposited as PTA-6826 in the American Type Culture Collection)
Intestinibacillus massiliensis	1871029	PRJEB18804	360802	Terrabacteria group	Firmicutes	2.84138	59.4	-	FTLU01	35	2796	2590	1/14/17	5/31/17	Scaffold	URMITE	SAMEA45751918	GCA_900155735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/735/GCA_900155735.1_ASM90015573v1	-	type strain: Marseille-P3216
Actinotignum timonense	1870995	PRJEB18928	361100	Terrabacteria group	Actinobacteria	2.29568	61.7	-	FTLO01	19	1952	1794	1/13/17	5/31/17	Scaffold	URMITE	SAMEA47263918	GCA_900155575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/575/GCA_900155575.1_ASM90015557v1	-	type strain: Marseille-P2803
Corynebacterium urinapleomorphum	1852380	PRJEB18932	361097	Terrabacteria group	Actinobacteria	2.26335	63.4	-	FTLL01	13	2143	2006	1/13/17	5/31/17	Scaffold	URMITE	SAMEA47264668	GCA_900155535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/535/GCA_900155535.1_ASM90015553v1	-	Marseille-P2799
Virgibacillus dakarensis	1917889	PRJEB18943	361094	Terrabacteria group	Firmicutes	4.75305	39.7	-	FUHS01	6	4650	4416	2/8/17	6/16/17	Scaffold	URMITE	SAMEA48328168	GCA_900155625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/625/GCA_900155625.1_ASM90015562v1	-	Marseille-P3469
Nitratireductor soli	1670619	PRJNA286300	286300	Proteobacteria	Alphaproteobacteria	5.12566	64.1	-	LFVY01	60	4985	4839	7/8/15	6/6/17	Contig	Zaozhuang University	SAMN03768409	GCA_001050155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/155/GCA_001050155.1_ASM105015v1	26346478	ZZ-1
Brucella microti CCM 4915	568815	PRJNA32233	32233	Proteobacteria	Alphaproteobacteria	3.33737	57.2366	chromosome 1:NC_013119.1/CP001578.1; chromosome 2:NC_013118.1/CP001579.1	-	2	3366	3198	8/18/09	4/17/17	Complete Genome	CNRS	SAMN02603148	GCA_000022745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/745/GCA_000022745.1_ASM2274v1	19653890	CCM 4915
Arabia massiliensis	1870985	PRJEB19971	379095	Terrabacteria group	Actinobacteria	3.37791	66.3	-	FWDJ01	1	2879	2764	3/18/17	6/13/17	Scaffold	URMITE	SAMEA103910505	GCA_900169505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/505/GCA_900169505.1_PRJEB19971	-	Marseille-P3078
Brucella canis	36855	PRJNA338461	338461	Proteobacteria	Alphaproteobacteria	3.30732	57.2365	chromosome 1:NZ_CP016973.1/CP016973.1; chromosome 2:NZ_CP016974.1/CP016974.1	-	2	3351	3133	8/29/16	4/5/17	Complete Genome	Viginia Tech	SAMN05559048	GCA_001715365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/365/GCA_001715365.1_ASM171536v1	-	2009004498
Brucella suis	29461	PRJNA338468	338468	Proteobacteria	Alphaproteobacteria	3.31523	57.2364	chromosome 1:NZ_CP016981.1/CP016981.1; chromosome 2:NZ_CP016982.1/CP016982.1	-	2	3362	3154	8/29/16	3/2/17	Complete Genome	Viginia Tech	SAMN05559129	GCA_001715425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/425/GCA_001715425.1_ASM171542v1	-	2004000577
Pseudomonas caspiana	1451454	PRJNA305105	305105	Proteobacteria	Gammaproteobacteria	6.10376	56.9	-	LOHF01	49	5501	5324	5/30/17	6/1/17	Scaffold	University of Balearic Islands	SAMN04317010	GCA_002158995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/158/995/GCA_002158995.1_ASM215899v1	28552245	FBF102
Thermobacillus sp. ZCTH02-B1	1858795	PRJNA324718	324718	Terrabacteria group	Firmicutes	3.37158	64.3	-	LZRU01	46	3102	2950	5/30/17	5/30/17	Contig	Instituto de Quimica	SAMN05213683	GCA_002159085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/085/GCA_002159085.1_ASM215908v1	-	-
Bacillus thermozeamaize	230954	PRJNA324718	324718	Terrabacteria group	Firmicutes	3.43912	53.7	-	LZRT01	143	3355	3146	5/30/17	5/30/17	Contig	Instituto de Quimica	SAMN05223356	GCA_002159075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/075/GCA_002159075.1_ASM215907v1	-	-
Paenibacillaceae bacterium ZCTH02-B3	1861638	PRJNA324718	324718	Terrabacteria group	Firmicutes	3.12214	62.5	-	LZRV01	187	3004	2769	5/30/17	5/30/17	Contig	Instituto de Quimica	SAMN05223357	GCA_002159065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/065/GCA_002159065.1_ASM215906v1	-	-
Firmicutes bacterium ZCTH02-B6	1861639	PRJNA324718	324718	Terrabacteria group	Firmicutes	2.77486	65.5	-	LZRQ01	304	2770	2468	5/30/17	5/30/17	Contig	Instituto de Quimica	SAMN05223360	GCA_002159155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/155/GCA_002159155.1_ASM215915v1	-	-
Gemmiger sp. An87	1965662	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.38413	58.6	-	NFHD01	76	3179	3032	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473766	GCA_002159185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/185/GCA_002159185.1_ASM215918v1	-	An87
Desulfuromonas acetexigens	38815	PRJEB16015	348507	Proteobacteria	delta/epsilon subdivisions	3.68312	60.3	-	FOJJ01	41	3448	3342	10/31/16	7/29/17	Contig	AALBORG UNIVERSITY	SAMEA4526271	GCA_900111775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/775/GCA_900111775.1_ASM90011177v1	-	-
Xanthomonas retroflexus	305959	PRJEB18431	357578	Proteobacteria	Gammaproteobacteria	4.65557	66.3	-	FRDD01	32	4286	4157	12/15/16	6/16/17	Contig	"UNIVERSITY OF COPENHAGEN, DEPARTMENT OF BIOLOGY"	SAMEA4551856	GCA_900143175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/175/GCA_900143175.1_ASM90014317v1	-	-
Actinomycetales bacterium JB111	1434822	PRJEB19043	374421	Terrabacteria group	Actinobacteria	3.26098	72.2	-	FUHX01	85	2928	2815	2/11/17	5/31/17	Contig	MICALIS	SAMEA80353918	GCA_900163555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/555/GCA_900163555.1_ASM90016355v1	-	JB111
Microbacterium esteraromaticum	57043	PRJEB19161	374426	Terrabacteria group	Actinobacteria	3.37421	66.3	-	FUKO01	50	3237	3108	2/11/17	5/31/17	Contig	MICALIS	SAMEA81151918	GCA_900163815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/815/GCA_900163815.1_ASM90016381v1	-	B Mb 05.01
Brevibacterium yomogidense	946573	PRJEB19162	384542	Terrabacteria group	Actinobacteria	3.28603	68.5	-	FWFF01	24	2878	2774	4/28/17	5/31/17	Contig	MICALIS	SAMEA80387668	GCA_900163715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/715/GCA_900163715.1_ASM90016371v1	-	B Co 03.10
Crenothrix polyspora	360316	PRJEB19189	374819	Proteobacteria	Gammaproteobacteria	3.92181	44.2	-	FUKI01	180	3678	3492	2/16/17	5/31/17	Contig	"Department of Microbiology and Ecosystem Science, University of Vienna"	SAMEA80830168	GCA_900163755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/755/GCA_900163755.1_ASM90016375v1	-	-
Brucella suis	29461	PRJNA257008	257008	Proteobacteria	Alphaproteobacteria	3.31509	57.2364	chromosome I:NZ_CP010850.1/CP010850.1; chromosome II:NZ_CP010851.1/CP010851.1	-	2	3361	3164	2/13/15	4/3/17	Complete Genome	µFORGE	SAMN03292446	GCA_000875695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/875/695/GCA_000875695.1_ASM87569v1	-	Human/AR/US/1981
Brucella canis	36855	PRJNA243891	243891	Proteobacteria	Alphaproteobacteria	3.31275	57.2364	chromosome 1:NZ_CP007758.1/CP007758.1; chromosome 2:NZ_CP007759.1/CP007759.1	-	2	3361	3152	8/15/14	4/2/17	Complete Genome	Los Alamos National Laboratory	SAMN02795942	GCA_000740335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/335/GCA_000740335.1_ASM74033v1	25237024	RM6/66
Citrobacter europaeus	1914243	PRJEB13613	324032	Proteobacteria	Gammaproteobacteria	5.29362	51.9	-	FLYB01	36	5133	4895	10/17/16	5/31/17	Contig	INSTITUT PASTEUR	SAMEA3935942	GCA_900079995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/995/GCA_900079995.1_ASM90007999v1	-	type strain: 97/99
Massiliomicrobiota sp. An80	1965658	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.58883	31.8	-	NFHI01	132	2706	2548	5/30/17	6/15/17	Contig	Veterinary Research Institute	SAMN06473760	GCA_002159255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/255/GCA_002159255.1_ASM215925v1	-	An80
Enorma massiliensis	1472761	PRJNA377666	377666	Terrabacteria group	Actinobacteria	2.36674	62.1	-	NFHO01	24	2036	1928	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473749	GCA_002159295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/295/GCA_002159295.1_ASM215929v1	-	An70
Muribaculum sp. An289	1965624	PRJNA377666	377666	FCB group	Bacteroidetes/Chlorobi group	2.32296	49.1	-	NFIV01	37	2091	1996	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473711	GCA_002159555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/555/GCA_002159555.1_ASM215955v1	-	An289
Elusimicrobium sp. An273	1965617	PRJNA377666	377666	Elusimicrobia	Elusimicrobia	1.50144	51.7	-	NFJD01	14	1445	1372	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473703	GCA_002159705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/705/GCA_002159705.1_ASM215970v1	-	An273
Brucella canis	36855	PRJNA242400	242400	Proteobacteria	Alphaproteobacteria	3.31032	57.2364	chromosome I:NZ_CP007629.1/CP007629.1; chromosome II:NZ_CP007630.1/CP007630.1	-	2	3358	3150	5/15/14	4/2/17	Complete Genome	National Veterinary Institute	SAMN02739937	GCA_000691585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/585/GCA_000691585.1_ASM69158v1	25035330	SVA13
Drancourtella sp. An210	1965589	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.03279	45.1	-	NFJS01	81	3066	2896	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473665	GCA_002159995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/995/GCA_002159995.1_ASM215999v1	-	An210
Anaerofilum sp. An201	1965588	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.22366	60.4	-	NFJT01	75	3071	2902	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473664	GCA_002160015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/015/GCA_002160015.1_ASM216001v1	-	An201
Mediterranea sp. An20	1965586	PRJNA377666	377666	FCB group	Bacteroidetes/Chlorobi group	3.84458	49.5	-	NFJV01	88	3427	3235	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473662	GCA_002160055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/055/GCA_002160055.1_ASM216005v1	-	An20
Erysipelatoclostridium sp. An173	1965571	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.93175	30.1	-	NFKR01	122	2909	2758	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473637	GCA_002160495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/495/GCA_002160495.1_ASM216049v1	-	An173
Brucella suis bv. 1 str. S2	1004954	PRJNA230685	230685	Proteobacteria	Alphaproteobacteria	3.31528	57.2364	chromosome I:NZ_CP006961.1/CP006961.1; chromosome II:NZ_CP006962.1/CP006962.1	-	2	3360	3167	3/25/14	4/2/17	Complete Genome	China Animal Health and Epidemiology Center	SAMN03068300	GCA_000600055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/055/GCA_000600055.1_ASM60005v1	-	S2
Marininema halotolerans	1155944	PRJEB17548	352025	Terrabacteria group	Firmicutes	3.5686	44.8	-	FPAA01	24	3428	3320	11/2/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444972	GCA_900116235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/235/GCA_900116235.1_IMG-taxon_2675903148_annotated_assembly	-	DSM 45789
Pigmentiphaga sp. NML080357	2008675	PRJNA387195	387195	Proteobacteria	Betaproteobacteria	5.73486	66.7	-	NINW01	59	5454	5294	6/9/17	6/12/17	Contig	Public Health Agency of Canada	SAMN07162457	GCA_002188465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/465/GCA_002188465.1_ASM218846v1	-	NML080357
Thaumasiovibrio subtropicus	1891207	PRJDB5109	387272	Proteobacteria	Gammaproteobacteria	5.40539	47.2	-	BDGQ01	271	4875	4681	5/18/17	6/26/17	Scaffold	"Laboratory of Microbiology, Division of Marine Life Science, Faculty of Fisheries Sciences, Hokkaido University"	SAMD00057776	GCA_002157755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/755/GCA_002157755.1_ASM215775v1	-	C4V358
Thaumasiovibrio occultus	1891184	PRJDB5109	387272	Proteobacteria	Gammaproteobacteria	4.47366	49.4	-	BDGP01	230	4155	3950	5/18/17	6/28/17	Scaffold	"Laboratory of Microbiology, Division of Marine Life Science, Faculty of Fisheries Sciences, Hokkaido University"	SAMD00057775	GCA_002157795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/795/GCA_002157795.1_ASM215779v1	-	C4II189
Haematobacter genomosp. 1	366618	PRJNA302795	302795	Proteobacteria	Alphaproteobacteria	4.20246	65.3	-	NIPW01	81	3994	3849	6/16/17	6/21/17	Contig	CDC	SAMN04279641	GCA_002196855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/855/GCA_002196855.1_ASM219685v1	-	H2240
Enterobacter bugandensis	881260	PRJEB11452	300213	Proteobacteria	Gammaproteobacteria	4.97174	55.5	-	FYBI01	54	4845	4658	6/9/17	6/21/17	Contig	JUSTUS LIEBIG UNIVERSITY	SAMEA104115216	GCA_900185975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/975/GCA_900185975.1_E_bugandensis_EB-247T	-	-
Chlamydiales bacterium SCGC AG-110-P3	1871323	PRJEB14715	390089	PVC group	Chlamydiae	1.29966	46.8	-	FLYP01	96	1038	954	6/11/17	6/21/17	Scaffold	Division of Microbial Ecology	SAMEA4346416	GCA_900093655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/655/GCA_900093655.1_SCG7086	-	-
Chlamydiales bacterium SCGC AB-751-O23	1871322	PRJEB14715	390089	PVC group	Chlamydiae	0.986924	35.4	-	FLYF01	89	812	715	6/11/17	6/21/17	Contig	Division of Microbial Ecology	SAMEA4346418	GCA_900093645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/645/GCA_900093645.1_AB751O23	-	-
Chlamydiales bacterium SCGC AG-110-M15	1871324	PRJEB14715	390089	PVC group	Chlamydiae	0.929815	41.8	-	FLYO01	54	775	711	6/11/17	6/21/17	Scaffold	Division of Microbial Ecology	SAMEA4346417	GCA_900093625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/625/GCA_900093625.1_SCG7109	-	-
Acidobacteria subdivision 13 bacterium RH2 MAG17b	1985431	PRJNA384362	384362	Acidobacteria	unclassified Acidobacteria	2.79846	58.5	-	NFUN01	169	-	-	6/16/17	6/16/17	Contig	Friedrich Schiller University Jena	SAMN06886300	GCA_002197525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/525/GCA_002197525.1_ASM219752v1	28642744	-
Acidobacteria subdivision 2 bacterium RH1 MAG20	1985433	PRJNA384362	384362	Acidobacteria	unclassified Acidobacteria	4.88515	57.6	-	NFUO01	760	-	-	6/16/17	6/16/17	Contig	Friedrich Schiller University Jena	SAMN06886313	GCA_002197545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/545/GCA_002197545.1_ASM219754v1	28642744	-
Sphingomonas dokdonensis	344880	PRJNA380341	380341	Proteobacteria	Alphaproteobacteria	3.45266	66.5	-	NBBI01	16	3311	3225	6/19/17	6/22/17	Contig	Georg-August-University Goettingen	SAMN06641655	GCA_002197685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/685/GCA_002197685.1_ASM219768v1	-	DSM 21029
Sphingomonas mucosissima	370959	PRJNA380342	380342	Proteobacteria	Alphaproteobacteria	3.58479	65.1	-	NBBJ01	16	3309	3210	6/19/17	6/22/17	Contig	Georg-August-University Goettingen	SAMN06641656	GCA_002197665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/665/GCA_002197665.1_ASM219766v1	-	DSM 17494
Flavobacteriaceae bacterium JJC	512012	PRJNA387341	387341	FCB group	Bacteroidetes/Chlorobi group	2.84113	39.6	-	NHOS01	8	2618	2552	6/19/17	6/22/17	Contig	GCAT-SEEK	SAMN07150348	GCA_002197835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/835/GCA_002197835.1_ASM219783v1	-	JJC
Fimbriiglobus ruber	1908690	PRJNA388644	388644	PVC group	Planctomycetes	12.3636	64.2	-	NIDE01	20	10044	9580	6/19/17	6/22/17	Contig	"Institute of Bioengineering, Research Center of Biotechnology of RAS"	SAMN07187746	GCA_002197845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/845/GCA_002197845.1_ASM219784v1	-	SP5
Pelagibacteraceae bacterium TMED216	1986812	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	0.809404	29.7	-	NHJN01	12	846	815	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972070	GCA_002197875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/875/GCA_002197875.1_ASM219787v1	-	-
Pseudomonas aestusnigri	857252	PRJNA381708	381708	Proteobacteria	Gammaproteobacteria	3.82977	60.9	-	NBYK01	30	3538	3446	6/19/17	6/22/17	Scaffold	University of Balearic Islands	SAMN06688252	GCA_002197985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/985/GCA_002197985.1_ASM219798v1	-	VGXO14
Deinococcus indicus	223556	PRJNA387221	387221	Terrabacteria group	Deinococcus-Thermus	4.46763	69.8	-	NHMK01	40	4221	4061	6/19/17	6/22/17	Scaffold	Shiv Nadar University	SAMN07142156	GCA_002198095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/095/GCA_002198095.1_ASM219809v1	-	DR1
Robiginitalea sp. O458	1982593	PRJNA386407	386407	FCB group	Bacteroidetes/Chlorobi group	3.30243	55	-	NGNR01	15	2970	2909	6/19/17	6/22/17	Scaffold	"Shandong University,Weihai"	SAMN06947001	GCA_002198115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/115/GCA_002198115.1_ASM219811v1	-	O458
Armatimonadetes bacterium Cent15-Ar3	1987502	PRJNA385570	385570	Terrabacteria group	Armatimonadetes	1.86834	54.6	-	NHZI02	448	2085	2028	6/19/17	6/28/17	Contig	UNSW Australia	SAMN06947420	GCA_002198635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/635/GCA_002198635.2_ASM219863v2	-	-
Kineosporia sp. A_224	1962180	PRJNA302799	302799	Terrabacteria group	Actinobacteria	7.19638	74.2	-	MWLN01	242	6617	6279	6/19/17	8/15/17	Scaffold	Eisenbakterien Odertal	SAMN06335523	GCA_002198655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/655/GCA_002198655.1_ASM219865v1	-	A 224
Brucella suis VBI22	1112912	PRJNA76709	76709	Proteobacteria	Alphaproteobacteria	3.31609	57.2364	chromosome I:NC_016797.1/CP003128.1; chromosome II:NC_016775.1/CP003129.1	-	2	3361	3167	11/28/11	3/30/17	Complete Genome	Virginia Bioinformatics Institute	SAMN01093721	GCA_000236255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/255/GCA_000236255.1_ASM23625v1	22275106	VBI22
Brucella suis 1330	204722	PRJNA70695	70695	Proteobacteria	Alphaproteobacteria	3.31516	57.2364	chromosome I:NC_017251.1/CP002997.1; chromosome II:NC_017250.1/CP002998.1	-	2	3358	3164	8/10/11	3/30/17	Complete Genome	Virginia Bioinformatics Institute	SAMN02604297	GCA_000223195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/223/195/GCA_000223195.1_ASM22319v1	22038969	1330
Ideonella sp. A 288	1962181	PRJNA302799	302799	Proteobacteria	Betaproteobacteria	6.98078	70.1	-	MWLO01	164	6183	5972	6/19/17	8/22/17	Scaffold	Eisenbakterien Odertal	SAMN06335522	GCA_002198735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/735/GCA_002198735.1_ASM219873v1	-	A 288
Rhizobium yanglingense	61013	PRJNA235161	235161	Proteobacteria	Alphaproteobacteria	7.9993	59	-	JHUO01	236	8723	4099	6/16/17	6/20/17	Scaffold	China Agricultural University	SAMN02584782	GCA_002200935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/935/GCA_002200935.1_ASM220093v1	-	CCBAU 01603
Polaribacter haliotis	1888915	PRJNA388033	388033	FCB group	Bacteroidetes/Chlorobi group	3.78518	29.9	-	NIDK01	29	3233	3167	6/20/17	6/22/17	Contig	Shandong Uniwersity at Weihai	SAMN07171767	GCA_002201315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/315/GCA_002201315.1_ASM220131v1	-	RA4-7
Acutalibacter muris	1796620	PRJNA289613	289613	Terrabacteria group	Firmicutes	3.80291	54.6	chromosome:NZ_CP021422.1/CP021422.1	-	1	3916	3670	6/20/17	7/21/17	Chromosome	Max von Pettenkofer-Institut	SAMN03856236	GCA_002201475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/475/GCA_002201475.1_ASM220147v1	-	KB18
Muribaculum intestinale	1796646	PRJNA289613	289613	FCB group	Bacteroidetes/Chlorobi group	3.30707	50.1	chromosome:NZ_CP021421.1/CP021421.1	-	1	2757	2637	6/20/17	7/21/17	Chromosome	Max von Pettenkofer-Institut	SAMN03856238	GCA_002201515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/515/GCA_002201515.1_ASM220151v1	-	YL27
Lacimicrobium sp. SS2-24	2005569	PRJNA388364	388364	Proteobacteria	Gammaproteobacteria	3.70873	50.5	-	NIWW01	21	3407	3341	6/20/17	6/22/17	Contig	Shandong University at Weihai	SAMN07175639	GCA_002201535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/535/GCA_002201535.1_ASM220153v1	-	SS2-24
Methanopyrus sp. SNP6	1937005	PRJNA362704	362704	Euryarchaeota	Methanopyri	1.42162	58	chromosome:CP019436.1	-	1	-	-	6/20/17	6/20/17	Chromosome	Zhejiang University of Technology	SAMN06246566	GCA_002201895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/895/GCA_002201895.1_ASM220189v1	-	SNP6
Cuniculiplasma sp. C_DKE	1961135	PRJNA358824	358824	Euryarchaeota	Thermoplasmata	1.60619	37.7	-	MWKS01	3	1588	1531	6/21/17	6/21/17	Contig	Karlsruhe Institute of Technology	SAMN06329911	GCA_002204655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/655/GCA_002204655.1_ASM220465v1	28607432	-
Thermoplasmatales archaeon ARMAN	1961137	PRJNA358824	358824	Euryarchaeota	Thermoplasmata	0.976441	45.8	-	MWKQ01	7	1041	991	6/21/17	6/21/17	Contig	Karlsruhe Institute of Technology	SAMN06329909	GCA_002204695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/695/GCA_002204695.1_ASM220469v1	28607432	-
Thermoplasmatales archaeon B_DKE	1961136	PRJNA358824	358824	Euryarchaeota	Thermoplasmata	1.90525	44.5	-	MWKR01	31	2035	1950	6/21/17	6/21/17	Contig	Karlsruhe Institute of Technology	SAMN06329910	GCA_002204705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/705/GCA_002204705.1_ASM220470v1	28607432	-
Sphingopyxis bauzanensis	651663	PRJNA389674	389674	Proteobacteria	Alphaproteobacteria	4.258	63.3	-	NISK01	28	4123	3932	6/22/17	6/24/17	Scaffold	Institute of Biochemistry and Biophysics	SAMN07204638	GCA_002205675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/675/GCA_002205675.1_ASM220567v1	20023054	DSM 22271
Roseateles terrae	431060	PRJNA389526	389526	Proteobacteria	Betaproteobacteria	5.51978	66.4	-	NIOG01	29	4765	4612	6/22/17	6/24/17	Contig	Northwest A&F University	SAMN07201748	GCA_002205615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/615/GCA_002205615.1_ASM220561v1	18175673	CCUG 52222
Roseateles aquatilis	431061	PRJNA389526	389526	Proteobacteria	Betaproteobacteria	6.38574	68.8	-	NIOF01	48	5581	5418	6/22/17	6/24/17	Contig	Northwest A&F University	SAMN07201749	GCA_002205645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/645/GCA_002205645.1_ASM220564v1	18175673	CCUG 48205
Pelomonas puraquae	431059	PRJNA389646	389646	Proteobacteria	Betaproteobacteria	6.05799	68.4	-	NISI01	43	5480	5351	6/22/17	6/26/17	Contig	Northwest A&F University	SAMN07204398	GCA_002205845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/845/GCA_002205845.1_ASM220584v1	17978231	CCUG 52769
Sphingopyxis witflariensis	173675	PRJNA389672	389672	Proteobacteria	Alphaproteobacteria	4.30676	63.3	-	NISJ01	38	4177	4040	6/22/17	6/26/17	Scaffold	Institute of Biochemistry and Biophysics	SAMN07204631	GCA_002205635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/635/GCA_002205635.1_ASM220563v1	12508864	DSM 14551
Calderihabitans maritimus	1246530	PRJDB4943	389423	Terrabacteria group	Firmicutes	3.06485	47.2	-	BDGJ01	223	3063	2891	6/3/17	6/28/17	Scaffold	"Laboratory of Marine Microbiology, Graduate School of Agriculture, Kyoto University"	SAMD00053944	GCA_002207765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/765/GCA_002207765.1_ASM220776v1	28526793	KKC1
Colwellia marinimaniae	1513592	PRJDB5767	389701	Proteobacteria	Gammaproteobacteria	4.3876	39.6	-	BDQM01	588	3701	3510	6/7/17	6/28/17	Contig	"National Institute of Technology, Wakayama College"	SAMD00081185	GCA_002207865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/865/GCA_002207865.1_ASM220786v1	-	MTCD1
Pseudomonas massiliensis	522492	PRJEB7542	264167	Proteobacteria	Gammaproteobacteria	4.72353	62.3	-	CCYK01	7	4302	4156	10/18/14	7/4/17	Contig	URMITE	SAMEA2821758	GCA_000826105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/105/GCA_000826105.1_Pseudomonas_massiliensis_CB1	-	CB1
Rhizobium anhuiense bv. trifolii	2018689	PRJNA302831	302831	Proteobacteria	Alphaproteobacteria	6.95748	61.2	-	LWMO01	63	6741	6439	4/27/16	7/13/17	Contig	Zhengzhou University of Light Industry	SAMN04281005	GCA_001632995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/995/GCA_001632995.1_ASM163299v1	-	WYCCWR10015
Rhodoblastus acidophilus	1074	PRJEB21359	391111	Proteobacteria	Alphaproteobacteria	4.7115	65.2	-	FYDG01	74	4443	4271	6/23/17	6/28/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06265338	GCA_900187365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/365/GCA_900187365.1_IMG-taxon_2724679731_annotated_assembly	-	DSM 137
Rhodospirillales bacterium B29T1	1963835	PRJEB21379	391620	Proteobacteria	Alphaproteobacteria	4.06547	63.1	-	FYEH01	28	3744	3632	6/23/17	6/28/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN07250955	GCA_900187945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/945/GCA_900187945.1_IMG-taxon_2693429500_annotated_assembly	-	B29T1
Thermoflexus hugenholtzii JAD2	877466	PRJEB21378	391621	Terrabacteria group	Chloroflexi	3.21696	67.3	-	FYEK01	78	2939	2814	6/23/17	6/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02746019	GCA_900187885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/885/GCA_900187885.1_IMG-taxon_2140918011_annotated_assembly	-	JAD2
Brucella canis ATCC 23365	483179	PRJNA20243	20243	Proteobacteria	Alphaproteobacteria	3.31277	57.2364	chromosome I:NC_010103.1/CP000872.1; chromosome II:NC_010104.1/CP000873.1	-	2	3361	3158	11/29/07	3/30/17	Complete Genome	Virginia Bioinformatics Institute	SAMN02604295	GCA_000018525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/525/GCA_000018525.1_ASM1852v1	-	-
Achromobacter marplatensis	470868	PRJNA391539	391539	Proteobacteria	Betaproteobacteria	6.88521	65.1	-	NJIG01	61	6352	6204	6/27/17	6/29/17	Contig	Northwest A&F University	SAMN07270369	GCA_002209535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/535/GCA_002209535.1_ASM220953v1	-	B2
Candidimonas nitroreducens	683354	PRJNA391542	391542	Proteobacteria	Betaproteobacteria	5.607	63.6	-	NJIH01	34	4981	4858	6/27/17	6/29/17	Contig	Northwest A&F University	SAMN07270373	GCA_002209565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/565/GCA_002209565.1_ASM220956v1	-	SC-089
Bradyrhizobium mercantei	1904807	PRJNA344479	344479	Proteobacteria	Alphaproteobacteria	8.84286	64	-	MKFI01	72	8147	7896	2/1/17	7/11/17	Contig	Embrapa	SAMN05826124	GCA_001982635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/635/GCA_001982635.1_ASM198263v1	-	SEMIA 6399
Colwellia agarivorans	1911682	PRJNA371543	371543	Proteobacteria	Gammaproteobacteria	4.72264	35.8	-	MUZU01	51	4051	3943	2/15/17	7/11/17	Scaffold	Shandong University at Weihai	SAMN06309550	GCA_002000085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/085/GCA_002000085.1_ASM200008v1	-	QM50
Marinibacterium profundimaris	1679460	PRJNA196730	196730	Proteobacteria	Alphaproteobacteria	6.1522	66.2	-	AQQR01	60	5663	5497	6/28/17	6/30/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN07274261	GCA_002210095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/210/095/GCA_002210095.1_ASM221009v1	-	22II1-22F33
Micromonospora wenchangensis	1185415	PRJNA378581	378581	Terrabacteria group	Actinobacteria	7.51376	73	-	MZMV01	150	6526	6212	6/28/17	6/30/17	Contig	Jiangxi Normal University	SAMN06554453	GCA_002210435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/210/435/GCA_002210435.1_ASM221043v1	-	CCTCC AA 2012002
Flagellimonas eckloniae	346185	PRJNA282771	282771	FCB group	Bacteroidetes/Chlorobi group	4.13228	37.8	-	LCTZ01	2	3578	3502	10/26/15	7/5/17	Contig	Korea Institute of Ocean Science and Technology	SAMN03571530	GCA_001413955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/955/GCA_001413955.1_ASM141395v1	-	DOKDO 007
Mameliella phaeodactyli	1535301	PRJNA390029	390029	Proteobacteria	Alphaproteobacteria	5.45378	65	-	NIWC01	35	5268	5120	6/29/17	7/1/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN07212126	GCA_002211155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/155/GCA_002211155.1_ASM221115v1	-	KD53
Mameliella atlantica	1542677	PRJNA390026	390026	Proteobacteria	Alphaproteobacteria	5.90267	65	-	NIVZ01	54	5732	5557	6/29/17	7/1/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN07212125	GCA_002211215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/215/GCA_002211215.1_ASM221121v1	-	L6M1-5
Ponticoccus lacteus	340996	PRJNA390027	390027	Proteobacteria	Alphaproteobacteria	5.42144	65.1	-	NIWA01	47	5257	5117	6/29/17	7/1/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN07212124	GCA_002211225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/225/GCA_002211225.1_ASM221122v1	-	JL351
Alkalimicrobium pacificum	1463601	PRJNA390028	390028	Proteobacteria	Alphaproteobacteria	5.78607	65	-	NIWB01	65	5629	5449	6/29/17	7/1/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN07212123	GCA_002211205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/205/GCA_002211205.1_ASM221120v1	-	F15
Noviherbaspirillum denitrificans	1968433	PRJNA312536	312536	Proteobacteria	Betaproteobacteria	5.79896	61.5	-	LSTO01	49	5614	5078	6/29/17	7/1/17	Scaffold	University of Minnesota	SAMN04498912	GCA_002211445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/445/GCA_002211445.1_ASM221144v1	-	TSA40
Brucella suis 1330	204722	PRJNA320	320	Proteobacteria	Alphaproteobacteria	3.31517	57.2364	chromosome I:NC_004310.3/AE014291.4; chromosome II:NC_004311.2/AE014292.2	-	2	3358	3161	9/30/02	3/29/17	Complete Genome	NITE/TIGR	SAMN02603682	GCA_000007505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/505/GCA_000007505.1_ASM750v1	12271122	1330
Brucella suis bv. 3 str. 686	520487	PRJNA243900	243900	Proteobacteria	Alphaproteobacteria	3.29726	57.2361	chromosome 1:NZ_CP007719.1/CP007719.1; chromosome 2:NZ_CP007718.1/CP007718.1	-	2	3341	3121	8/15/14	4/2/17	Complete Genome	Los Alamos National Laboratory	SAMN02769637	GCA_000740255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/255/GCA_000740255.1_ASM74025v1	25237024	686
Sphingobacteriales bacterium TSM_CSM	1932005	PRJNA359419	359419	FCB group	Bacteroidetes/Chlorobi group	4.92045	46	-	MTCR01	178	3767	3563	6/30/17	7/3/17	Contig	SCELSE	SAMN06191786	GCA_002212725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/725/GCA_002212725.1_ASM221272v1	-	TSM_CSM
Haliangium sp. TSM_HC	1931276	PRJNA359471	359471	Proteobacteria	delta/epsilon subdivisions	2.23201	63.3	-	MTCS01	501	1871	1580	6/30/17	7/3/17	Contig	SCELSE	SAMN06191787	GCA_002212765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/765/GCA_002212765.1_ASM221276v1	-	TSM_HC
Sphingobacteriales bacterium TSM_CSS	1972511	PRJNA380517	380517	FCB group	Bacteroidetes/Chlorobi group	4.48996	45.7	-	NBMY01	173	3500	3327	6/30/17	7/3/17	Contig	SCELSE	SAMN06644716	GCA_002212985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/985/GCA_002212985.1_ASM221298v1	-	TSM_CSS
Herbaspirillum aquaticum	568783	PRJNA390878	390878	Proteobacteria	Betaproteobacteria	5.42499	62.7	-	NJGV01	67	4881	4734	6/30/17	7/3/17	Contig	Northwest A&F University	SAMN07251784	GCA_002213425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/425/GCA_002213425.1_ASM221342v1	19671717	IEH 4430
Xenophilus sp. AP218F	2014876	PRJNA390982	390982	Proteobacteria	Betaproteobacteria	3.97829	64.7	-	NJIE01	42	3698	3574	6/30/17	7/3/17	Scaffold	University of Central Florida	SAMN07255616	GCA_002213445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/445/GCA_002213445.1_ASM221344v1	-	AP218F
cyanobacterium TDX16	1503470	PRJNA382458	382458	Terrabacteria group	Cyanobacteria/Melainabacteria group	15.3332	55.2	-	NDGV01	4023	15677	15006	6/30/17	6/30/17	Scaffold	Hebei University of Technology	SAMN06706618	GCA_002213405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/405/GCA_002213405.1_ASM221340v1	-	TDX16
uncultured delta proteobacterium	34034	PRJEB13525	390597	Proteobacteria	delta/epsilon subdivisions	4.00935	60.1	-	FLUQ01	3	3848	3772	6/15/17	6/15/17	Scaffold	Genoscope CEA	SAMEA3931508	GCA_900079685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/685/GCA_900079685.1_APW_PRJEB13525_v1	-	-
Listeria sp. ILCC801	1649188	PRJEB9225	390501	Terrabacteria group	Firmicutes	2.89117	40.3	-	FYBQ01	24	2926	2824	6/15/17	7/5/17	Contig	JUSTUS LIEBIG UNIVERSITY	SAMEA104121265	GCA_900186125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/125/GCA_900186125.1_ILCC801.fasta	-	-
uncultured Clostridiales bacterium	172733	PRJEB13526	390594	Terrabacteria group	Firmicutes	3.66831	57.7	-	FLUN01	1	3563	3478	6/15/17	6/15/17	Scaffold	Genoscope CEA	SAMEA3931510	GCA_900079765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/765/GCA_900079765.1_APW_PRJEB13526_v1	-	-
uncultured alpha proteobacterium	91750	PRJEB13529	390593	Proteobacteria	Alphaproteobacteria	4.04183	68.4	-	FLUO01	3	3918	3834	6/15/17	6/15/17	Scaffold	Genoscope CEA	SAMEA3931512	GCA_900079695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/695/GCA_900079695.1_APW_PRJEB13529_v1	-	-
uncultured Pleomorphomonas sp.	442121	PRJEB14296	390585	Proteobacteria	Alphaproteobacteria	5.8892	66.5	chromosome KL86PLE:LT608334.1	FMJD01	1	12164	12002	6/14/17	6/14/17	Chromosome	Genoscope CEA	SAMEA4384484	GCA_900095415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/415/GCA_900095415.1_APW_KL86PLE_v1	-	-
Hymenobacter gelipurpurascens	89968	PRJEB21361	391114	FCB group	Bacteroidetes/Chlorobi group	5.06095	57	-	FYEW01	9	4274	4178	6/25/17	7/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06265337	GCA_900187375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/375/GCA_900187375.1_IMG-taxon_2728369218_annotated_assembly	-	DSM 11116
Kytococcus aerolatus	592308	PRJEB21360	391115	Terrabacteria group	Actinobacteria	2.40242	72.3	-	FYEZ01	5	2268	2182	6/25/17	7/5/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05445756	GCA_900187395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/395/GCA_900187395.1_IMG-taxon_2734482797_annotated_assembly	-	DSM 22179
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31047	57.2359	chromosome 1:NZ_CP018494.1/CP018494.1; chromosome 2:NZ_CP018495.1/CP018495.1	-	2	3374	3131	6/13/17	6/15/17	Complete Genome	"Bundeswehr, Institute of Microbiology"	SAMN05932955	GCA_002191355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/355/GCA_002191355.1_ASM219135v1	28388689	BwIM_ITA_45
Acinetobacter apis	1229165	PRJEB21552	392265	Proteobacteria	Gammaproteobacteria	2.41378	38.3	-	FZLN01	12	2239	2159	6/29/17	7/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444584	GCA_900197575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/197/575/GCA_900197575.1_IMG-taxon_2690315601_annotated_assembly	-	ANC 5114
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.30973	57.2359	chromosome 1:NZ_CP018496.1/CP018496.1; chromosome 2:NZ_CP018497.1/CP018497.1	-	2	3372	3126	6/13/17	6/15/17	Complete Genome	"Bundeswehr, Institute of Microbiology"	SAMN05932987	GCA_002191375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/375/GCA_002191375.1_ASM219137v1	28388689	BwIM_ITA_55
Brucella melitensis bv. 3 str. Ether	520466	PRJNA243894	243894	Proteobacteria	Alphaproteobacteria	3.31073	57.2359	chromosome 1:NZ_CP007760.1/CP007760.1; chromosome 2:NZ_CP007761.1/CP007761.1	-	2	3384	3130	8/15/14	4/2/17	Complete Genome	Los Alamos National Laboratory	SAMN02795947	GCA_000740355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/355/GCA_000740355.1_ASM74035v1	25237024	ether
Brucella melitensis	29459	PRJNA398009	398009	Proteobacteria	Alphaproteobacteria	3.31186	57.2358	chromosome 1:NZ_CP022827.1/CP022827.1; chromosome 2:NZ_CP022828.1/CP022828.1	-	2	3379	3141	8/22/17	8/24/17	Complete Genome	China Agricultural University	SAMN07499375	GCA_002262955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/955/GCA_002262955.1_ASM226295v1	-	BY38
Brucella melitensis	29459	PRJNA390013	390013	Proteobacteria	Alphaproteobacteria	3.31125	57.2358	chromosome I:NZ_CP022204.1/CP022204.1; chromosome II:NZ_CP022205.1/CP022205.1	-	2	3374	3058	7/3/17	7/5/17	Complete Genome	Lanzhou Veterinary Research Institute	SAMN07224390	GCA_002214285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/285/GCA_002214285.1_ASM221428v1	-	QY1
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31105	57.2358	chromosome 1:NZ_CP018478.1/CP018478.1; chromosome 2:NZ_CP018479.1/CP018479.1	-	2	3375	3148	6/13/17	6/15/17	Complete Genome	"Bundeswehr, Institute of Microbiology"	SAMN05932969	GCA_002191235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/235/GCA_002191235.1_ASM219123v1	28388689	BwIM_AFG_63
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31349	57.2358	chromosome 1:NZ_CP018486.1/CP018486.1; chromosome 2:NZ_CP018487.1/CP018487.1	-	2	3373	3149	6/13/17	6/15/17	Complete Genome	"Bundeswehr, Institute of Microbiology"	SAMN05932947	GCA_002191295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/295/GCA_002191295.1_ASM219129v1	28388689	BwIM_IRN_37
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31192	57.2358	chromosome 1:NZ_CP018490.1/CP018490.1; chromosome 2:NZ_CP018491.1/CP018491.1	-	2	3373	3145	6/13/17	6/15/17	Complete Genome	"Bundeswehr, Institute of Microbiology"	SAMN05932974	GCA_002191335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/335/GCA_002191335.1_ASM219133v1	28388689	BwIM_IRQ_32
Leptolyngbya ohadii IS1	2009322	PRJNA389637	389637	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.90246	52.1	-	NKFP01	8	6692	6378	7/5/17	7/7/17	Scaffold	The Hebrew University of Jerusalem	SAMN07204499	GCA_002215035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/035/GCA_002215035.1_ASM221503v1	27501380	IS1
Actinomyces vulturis	1857645	PRJNA324624	324624	Terrabacteria group	Actinobacteria	2.20267	53.9	-	LZRK01	10	1871	1788	7/19/16	7/11/17	Scaffold	China CDC	SAMN05226836	GCA_001687305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/305/GCA_001687305.1_ASM168730v1	-	VUL7
Acinetobacter defluvii	1871111	PRJNA327706	327706	Proteobacteria	Gammaproteobacteria	3.73717	38	-	MAUF01	141	3633	3432	8/13/16	7/11/17	Contig	"West China Hospital, Sichuan University"	SAMN05356262	GCA_001704615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/615/GCA_001704615.1_ASM170461v1	-	WCHA30
Paenibacillus polysaccharolyticus	582692	PRJEB15806	347782	Terrabacteria group	Firmicutes	6.49515	45.6	-	FMVM01	34	5637	5502	10/17/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05720606	GCA_900102085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/085/GCA_900102085.1_IMG-taxon_2654588110_annotated_assembly	-	BL9
Actinomyces liubingyangii	1921764	PRJNA355080	355080	Terrabacteria group	Actinobacteria	2.02756	55	-	MQSU01	10	1747	1672	12/16/16	4/16/17	Scaffold	China CDC	SAMN06062064	GCA_001907245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/245/GCA_001907245.1_ASM190724v1	-	VUL4_1
Mycobacterium persicum	1487726	PRJNA354248	354248	Terrabacteria group	Actinobacteria	6.17221	66.2	-	MVIF01	387	5659	5178	4/11/17	7/11/17	Contig	San Raffaele Scientific Institute	SAMN06064255	GCA_002086675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/675/GCA_002086675.1_ASM208667v1	-	AFPC-000227
Imhoffiella purpurea	1249627	PRJNA178953	178953	Proteobacteria	Gammaproteobacteria	4.76666	64.8	-	AONC01	151	4175	4003	3/4/14	8/12/17	Contig	Institute of Microbial Technology	SAMN02951921	GCA_000585215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/215/GCA_000585215.1_Thiorhodococcus_sp.	-	AK35
Noviherbaspirillum autotrophicum	709839	PRJNA270558	270558	Proteobacteria	Betaproteobacteria	5.3846	59.9	-	JWJG01	28	5072	4890	1/15/15	8/12/17	Scaffold	Hokkaido University	SAMN03267208	GCA_000818395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/395/GCA_000818395.1_ASM81839v1	-	TSA66
Photobacterium proteolyticum	1903952	PRJNA343696	343696	Proteobacteria	Gammaproteobacteria	6.48443	47.9	-	MJIL01	101	5760	5477	1/9/17	7/19/17	Scaffold	"Yantai Institute of Coastal Zone Research,Chinese Academy of Sciences"	SAMN05792409	GCA_001939735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/735/GCA_001939735.1_ASM193973v1	-	13-12
Agrobacterium salinitolerans	1923828	PRJNA355330	355330	Proteobacteria	Alphaproteobacteria	4.99046	59.3	-	MRDH01	40	4770	4586	2/28/17	7/19/17	Scaffold	"Northeast institute of Geography and Agroecology, Chinese Academy of Sciences"	SAMN06091695	GCA_002008225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/008/225/GCA_002008225.1_ASM200822v1	-	YIC 5082
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31267	57.2358	chromosome 1:NZ_CP018512.1/CP018512.1; chromosome 2:NZ_CP018513.1/CP018513.1	-	2	3373	3149	6/13/17	6/15/17	Complete Genome	"Bundeswehr, Institute of Microbiology"	SAMN05932948	GCA_002191455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/455/GCA_002191455.1_ASM219145v1	28388689	BwIM_SYR_04
Gemmatimonadetes bacterium 2013_60CM_65_52	1978118	PRJNA366012	366012	FCB group	Gemmatimonadetes	4.20164	65	-	NGFI01	14	-	-	7/6/17	7/6/17	Scaffold	DOE Joint Genome Institute	SAMN06887671	GCA_002215645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/645/GCA_002215645.1_ASM221564v1	-	-
Bacteroidetes bacterium 2013_40CM_41_45	1978119	PRJNA366011	366011	FCB group	Bacteroidetes/Chlorobi group	3.37662	41.3	-	NGFH01	11	-	-	7/6/17	7/6/17	Scaffold	DOE Joint Genome Institute	SAMN06887670	GCA_002215675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/675/GCA_002215675.1_ASM221567v1	-	-
candidate division TA06 bacterium JGI_Cruoil_03_38_101	1973746	PRJNA249643	249643	unclassified Bacteria	Bacteria candidate phyla	1.62343	38.2	-	NGFL01	73	-	-	7/6/17	7/6/17	Scaffold	DOE Joint Genome Institute	SAMN06887667	GCA_002215665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/665/GCA_002215665.1_ASM221566v1	-	-
Proteobacteria bacterium TMED61	1986601	PRJNA385857	385857	Proteobacteria	unclassified Proteobacteria	2.60262	52.9	-	NHDO01	96	2546	2453	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971915	GCA_002171735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/735/GCA_002171735.1_ASM217173v1	-	-
Paenibacillus rubinfantis	1720296	PRJEB11873	304239	Terrabacteria group	Firmicutes	5.37036	53	-	FAUQ01	20	5010	4749	11/29/15	7/19/17	Scaffold	URMITE	SAMEA3673775	GCA_001486505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/486/505/GCA_001486505.1_Paenibacillus_rubiinfantis	-	MT18
Paenibacillus senegalimassiliensis	1737426	PRJEB11875	304240	Terrabacteria group	Firmicutes	5.0597	49.2	-	FAUP01	15	4683	4527	11/29/15	7/19/17	Scaffold	URMITE	SAMEA3674216	GCA_001486585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/486/585/GCA_001486585.1_Paenibacillus_senegalomassiliensis	-	SIT18
Paenibacillus tuaregi	1816681	PRJEB13948	321276	Terrabacteria group	Firmicutes	5.66863	49.1	-	FLKE01	4	5132	4932	5/13/16	7/19/17	Scaffold	URMITE	SAMEA3980476	GCA_900086655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/655/GCA_900086655.1_PRJEB13948	-	Marseille-P2472
Paenibacillus bouchesdurhonensis	1870990	PRJEB18942	361093	Terrabacteria group	Firmicutes	5.82492	47.5	-	FTLT01	8	-	-	2/8/17	2/8/17	Scaffold	URMITE	SAMEA48316168	GCA_900155685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/685/GCA_900155685.1_Paenibacillus_bouchesdurhonensis	-	Marseille-P3071
Kingella negevensis	1522312	PRJEB20479	383518	Proteobacteria	Betaproteobacteria	2.1874	45.3	-	FXBH01	12	2281	2071	4/26/17	7/19/17	Scaffold	URMITE	SAMEA103981412	GCA_900177895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/895/GCA_900177895.1_PRJEB20479	-	SW7208426
Algoriphagus marinus	1925762	PRJNA359154	359154	FCB group	Bacteroidetes/Chlorobi group	4.87328	39.5	-	MSPQ01	30	4188	4115	1/5/17	7/19/17	Contig	Shandong Uniwersity at Weihai	SAMN06187575	GCA_001936475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/475/GCA_001936475.1_ASM193647v1	-	am2
Clostridium tepidum	1962263	PRJNA355889	355889	Terrabacteria group	Firmicutes	3.0744	27.1	-	MRAE01	138	2814	2577	2/28/17	7/19/17	Contig	Institute for Environmental Health	SAMN06094717	GCA_002008345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/008/345/GCA_002008345.1_ASM200834v1	-	IEH 97212
Algibacter aquaticus	1849968	PRJNA321646	321646	FCB group	Bacteroidetes/Chlorobi group	4.64037	30.6	-	MDJD01	54	3939	3749	9/28/16	7/29/17	Contig	The University of Tokyo	SAMN05001254	GCA_001747085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/085/GCA_001747085.1_ASM174708v1	-	SK-16
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31141	57.2358	chromosome 1:NZ_CP018536.1/CP018536.1; chromosome 2:NZ_CP018537.1/CP018537.1	-	2	3375	3148	6/13/17	6/15/17	Complete Genome	"Bundeswehr, Institute of Microbiology"	SAMN05932951	GCA_002191575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/575/GCA_002191575.1_ASM219157v1	28388689	BwIM_TKM_56
Micromonospora echinospora	1877	PRJEB14516	326383	Terrabacteria group	Actinobacteria	7.77559	72.3	chromosome I:NZ_LT607413.1/LT607413.1	-	1	6642	6317	8/15/16	7/11/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04488361	GCA_900091495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/495/GCA_900091495.1_IMG-taxon_2622736613_annotated_assembly	-	DSM 43816
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31274	57.2358	chromosome 1:NZ_CP018540.1/CP018540.1; chromosome 2:NZ_CP018541.1/CP018541.1	-	2	3373	3145	6/13/17	6/15/17	Complete Genome	"Bundeswehr, Institute of Microbiology"	SAMN05932920	GCA_002191615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/615/GCA_002191615.1_ASM219161v1	28388689	BwIM_TUR_03
Bathymodiolus platifrons methanotrophic gill symbiont	113268	PRJDB5337	388259	Proteobacteria	Gammaproteobacteria	4.01802	39.8	-	BDMN01	613	4139	3555	5/26/17	6/12/17	Contig	"Department of Subsurface Geobiological Analysis and Research, Japan Agency for Marine-Earth Science and Technology"	SAMD00067362	GCA_002189065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/065/GCA_002189065.1_ASM218906v1	28453654	HPD1508-B01-01
Saccharibacillus sp. O16	1978120	PRJNA383352	383352	Terrabacteria group	Firmicutes	5.7161	53.4	-	NIOB01	25	4936	4798	6/9/17	6/12/17	Contig	Institute of Microbial Technology	SAMN06761642	GCA_002189105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/105/GCA_002189105.1_ASM218910v1	-	O16
Cloacibacillus sp. An23	1965591	PRJNA377666	377666	Synergistetes	Synergistia	2.89553	57.9	-	NFJQ01	31	2786	2693	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473667	GCA_002159945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/945/GCA_002159945.1_ASM215994v1	-	An23
Barnesiella sp. An22	1965590	PRJNA377666	377666	FCB group	Bacteroidetes/Chlorobi group	3.34657	53	-	NFJR01	58	2816	2698	5/30/17	6/12/17	Contig	Veterinary Research Institute	SAMN06473666	GCA_002159975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/975/GCA_002159975.1_ASM215997v1	-	An22
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31272	57.2358	chromosome 1:NZ_CP018544.1/CP018544.1; chromosome 2:NZ_CP018545.1/CP018545.1	-	2	3371	3146	6/13/17	6/15/17	Complete Genome	"Bundeswehr, Institute of Microbiology"	SAMN05932930	GCA_002191655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/655/GCA_002191655.1_ASM219165v1	28388689	BwIM_TUR_17
Micromonospora zamorensis	709883	PRJEB14469	326083	Terrabacteria group	Actinobacteria	7.09603	71.2	chromosome I:NZ_LT607755.1/LT607755.1	-	1	6418	6183	8/16/16	7/11/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04488385	GCA_900090275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/090/275/GCA_900090275.1_IMG-taxon_2617270899_annotated_assembly	-	DSM 45600
Micromonospora echinaurantiaca	47857	PRJEB14472	326079	Terrabacteria group	Actinobacteria	7.20323	73.2	chromosome I:NZ_LT607750.1/LT607750.1	-	1	6601	6298	8/16/16	7/11/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04488338	GCA_900090235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/090/235/GCA_900090235.1_IMG-taxon_2623620557_annotated_assembly	-	DSM 43904
Micromonospora siamensis	299152	PRJEB14467	326085	Terrabacteria group	Actinobacteria	6.25022	73.2	chromosome I:NZ_LT607751.1/LT607751.1	-	1	5726	5527	8/16/16	7/11/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489833	GCA_900090305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/090/305/GCA_900090305.1_IMG-taxon_2634166273_annotated_assembly	-	DSM 45097
Micromonospora viridifaciens	1881	PRJEB14518	326381	Terrabacteria group	Actinobacteria	7.07399	72.1	chromosome I:NZ_LT607411.1/LT607411.1	-	1	6429	6078	8/15/16	7/11/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489820	GCA_900091545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/545/GCA_900091545.1_IMG-taxon_2636416073_annotated_assembly	-	DSM 43909
Micromonospora inositola	47865	PRJEB14463	326089	Terrabacteria group	Actinobacteria	6.70809	72.2	chromosome I:NZ_LT607754.1/LT607754.1	-	1	6358	6017	8/16/16	7/11/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04488340	GCA_900090285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/090/285/GCA_900090285.1_IMG-taxon_2623620396_annotated_assembly	-	DSM 43819
Micromonospora echinofusca	47858	PRJEB14506	326369	Terrabacteria group	Actinobacteria	7.00263	73.3	chromosome I:NZ_LT607733.1/LT607733.1	-	1	6058	5823	8/15/16	7/11/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04488339	GCA_900091445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/445/GCA_900091445.1_IMG-taxon_2623620567_annotated_assembly	-	DSM 43913
Micromonospora coxensis	356852	PRJEB14466	326084	Terrabacteria group	Actinobacteria	6.76979	73.6	chromosome I:NZ_LT607753.1/LT607753.1	-	1	6004	5791	8/16/16	7/11/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04488465	GCA_900090295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/090/295/GCA_900090295.1_IMG-taxon_2623620609_annotated_assembly	-	DSM 45161
Micromonospora coriariae	285665	PRJEB14509	326365	Terrabacteria group	Actinobacteria	6.92979	71.8	chromosome I:NZ_LT607412.1/LT607412.1	-	1	6430	6133	8/15/16	7/11/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04488267	GCA_900091455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/455/GCA_900091455.1_IMG-taxon_2623620612_annotated_assembly	-	DSM 44875
Natranaerobius trueperi	759412	PRJNA389618	389618	Terrabacteria group	Firmicutes	2.63333	33.1	-	NIQC01	127	2602	2402	7/7/17	7/11/17	Contig	Chinese Academy of Agricultural Sciences	SAMN07203980	GCA_002216005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/005/GCA_002216005.1_ASM221600v1	-	DSM 18760
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31262	57.2358	chromosome 1:NZ_CP018546.1/CP018546.1; chromosome 2:NZ_CP018547.1/CP018547.1	-	2	3374	3149	6/13/17	6/15/17	Complete Genome	"Bundeswehr, Institute of Microbiology"	SAMN05932975	GCA_002191675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/675/GCA_002191675.1_ASM219167v1	28388689	BwIM_TUR_19
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31262	57.2358	chromosome 1:NZ_CP018560.1/CP018560.1; chromosome 2:NZ_CP018561.1/CP018561.1	-	2	3376	3147	6/13/17	6/15/17	Complete Genome	"Bundeswehr, Institute of Microbiology"	SAMN05932973	GCA_002191755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/755/GCA_002191755.1_ASM219175v1	28388689	BwIM_TUR_59
Flavobacterium hercynium	387094	PRJNA354433	354433	FCB group	Bacteroidetes/Chlorobi group	5.26017	33.8	-	MUGW01	101	4523	4419	7/12/17	7/14/17	Scaffold	FDA	SAMN06049051	GCA_002217285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/285/GCA_002217285.1_ASM221728v1	-	DSM 18292
Flavobacterium oncorhynchi	728056	PRJNA354433	354433	FCB group	Bacteroidetes/Chlorobi group	4.7308	33.3	-	MUHA01	52	4061	3961	7/12/17	7/14/17	Scaffold	FDA	SAMN06049060	GCA_002217355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/355/GCA_002217355.1_ASM221735v1	-	CCUG 59446
Flavobacterium plurextorum	1114867	PRJNA354433	354433	FCB group	Bacteroidetes/Chlorobi group	5.06225	33.1	-	MUHD01	65	4298	4192	7/12/17	7/14/17	Scaffold	FDA	SAMN06049068	GCA_002217395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/395/GCA_002217395.1_ASM221739v1	-	CCUG 60112
Flavobacterium tructae	1114873	PRJNA354433	354433	FCB group	Bacteroidetes/Chlorobi group	4.95178	35.7	-	MUHH01	100	4106	3984	7/12/17	7/14/17	Scaffold	FDA	SAMN06049067	GCA_002217475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/475/GCA_002217475.1_ASM221747v1	-	CCUG 60100
Geobacillus uzenensis	129339	PRJNA383648	383648	Terrabacteria group	Firmicutes	3.35771	52.2	-	NEWL01	10	3428	3103	7/13/17	7/15/17	Contig	University of Pretoria	SAMN06768593	GCA_002217665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/665/GCA_002217665.1_ASM221766v1	-	BGSC 92A1
Geobacillus galactosidasius	883812	PRJNA383662	383662	Terrabacteria group	Firmicutes	3.79483	41.6	-	NDYL01	6	3957	3544	7/13/17	7/15/17	Contig	University of Pretoria	SAMN06770004	GCA_002217735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/735/GCA_002217735.1_ASM221773v1	-	DSM 18751
Streptomyces hyaluromycini	1377993	PRJDB4283	393009	Terrabacteria group	Actinobacteria	11.525	71.1	-	BCFL01	52	10247	9658	7/1/17	7/15/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00041946	GCA_002217755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/755/GCA_002217755.1_ASM221775v1	-	NBRC 110483
Lactobacillus mixtipabuli	1435342	PRJDB4275	391104	Terrabacteria group	Firmicutes	2.51112	43.7	-	BCMF01	87	2338	2259	6/13/17	7/15/17	Scaffold	NARO Institute of Livestock and Grassland Science	SAMD00042395	GCA_002217925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/925/GCA_002217925.1_ASM221792v1	-	IWT30
Vibrio algivorus	1667024	PRJDB5783	391150	Proteobacteria	Gammaproteobacteria	3.59476	40.7	-	BDSC01	8	3271	3166	6/16/17	7/15/17	Scaffold	"Laboratory of Microbiology, Division of Marine Life Science, Faculty of Fisheries Sciences, Hokkaido University"	SAMD00080445	GCA_002218005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/005/GCA_002218005.1_ASM221800v1	28662104	NBRC111146
Nodularia sp. NIES-3585	1973477	PRJDB5665	381306	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.77354	41.3	-	BDUB01	4	5080	4777	6/24/17	7/15/17	Scaffold	Toyohashi University of Technology	SAMD00079814	GCA_002218065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/065/GCA_002218065.1_ASM221806v1	-	NIES-3585
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31133	57.2358	chromosome 1:NZ_CP018504.1/CP018504.1; chromosome 2:NZ_CP018505.1/CP018505.1	-	2	3375	3146	6/13/17	6/15/17	Complete Genome	"Bundeswehr, Institute of Microbiology"	SAMN05932949	GCA_002191915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/915/GCA_002191915.1_ASM219191v1	28388689	BwIM_SAU_09
Acinetobacter marinus	281375	PRJEB15478	343901	Proteobacteria	Gammaproteobacteria	2.99478	43.3	-	FMYK01	22	2782	2665	10/20/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421749	GCA_900096915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/096/915/GCA_900096915.1_IMG-taxon_2671180220_annotated_assembly	-	ANC 3699
Candidatus Frackibacter sp. WG11	2017976	PRJEB15756	347662	Terrabacteria group	Firmicutes	2.76035	33.4	-	FMZT01	47	2718	2571	10/20/16	8/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04515661	GCA_900101375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/375/GCA_900101375.1_IMG-taxon_2642422556_annotated_assembly	-	WG11
Bacillus xerothermodurans	1977292	PRJNA387458	387458	Terrabacteria group	Firmicutes	4.36119	51	-	NHRJ01	32	4149	3895	7/18/17	7/21/17	Contig	Jet Propulsion Laboratory	SAMN07152227	GCA_002220865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/865/GCA_002220865.1_ASM222086v1	-	ATCC 27380
Anaerovirgula multivorans	312168	PRJEB21418	391658	Terrabacteria group	Firmicutes	5.389	34.9	-	FZOJ01	105	5127	4897	7/13/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05446037	GCA_900188145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/145/GCA_900188145.1_IMG-taxon_2706794911_annotated_assembly	-	SCA
Dokdonia pacifica	1627892	PRJEB21400	391668	FCB group	Bacteroidetes/Chlorobi group	5.52074	34.1	-	FZNY01	31	4853	4754	7/13/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06265376	GCA_900188275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/275/GCA_900188275.1_IMG-taxon_2724679821_annotated_assembly	-	DSM 25597
Tropicimonas sediminicola	1031541	PRJEB21423	391645	Proteobacteria	Alphaproteobacteria	5.17422	66.4	-	FZOY01	32	4811	4716	7/13/17	7/21/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421757	GCA_900188335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/335/GCA_900188335.1_IMG-taxon_2681813518_annotated_assembly	-	DSM 29339
Ekhidna lutea	447679	PRJEB21436	391632	FCB group	Bacteroidetes/Chlorobi group	4.22831	40.3	-	FZPD01	16	3731	3660	7/13/17	7/21/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421640	GCA_900188325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/325/GCA_900188325.1_IMG-taxon_2687453772_annotated_assembly	-	DSM 19307
Sphingomonas laterariae	861865	PRJEB21420	391652	Proteobacteria	Alphaproteobacteria	4.41939	65.5	-	FZOS01	85	4286	4131	7/13/17	7/21/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06295912	GCA_900188165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/165/GCA_900188165.1_IMG-taxon_2706794917_annotated_assembly	-	LNB2
Belliella buryatensis	1500549	PRJEB21421	391651	FCB group	Bacteroidetes/Chlorobi group	3.88006	38.3	-	FZOK01	52	3347	3262	7/12/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06295967	GCA_900188245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/245/GCA_900188245.1_IMG-taxon_2706794919_annotated_assembly	-	5C
Methylobacillus rhizosphaerae	551994	PRJEB21401	391667	Proteobacteria	Betaproteobacteria	2.36881	52.4	-	FZOA01	17	2316	2234	7/13/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192560	GCA_900187985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/985/GCA_900187985.1_IMG-taxon_2657245330_annotated_assembly	-	Ca-68
Asanoa hainanensis	560556	PRJEB21438	391638	Terrabacteria group	Actinobacteria	8.64497	71.2	-	FZPH01	44	8090	7792	7/12/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421812	GCA_900188485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/485/GCA_900188485.1_IMG-taxon_2675903059_annotated_assembly	-	CGMCC 4.5593
Pseudomonas segetis	298908	PRJEB21416	391660	Proteobacteria	Gammaproteobacteria	4.72542	56.7	-	FZOG01	16	4370	4265	7/12/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216255	GCA_900188155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/155/GCA_900188155.1_IMG-taxon_2671180091_annotated_assembly	-	CIP 108523
Actinoplanes regularis	52697	PRJEB21393	391603	Terrabacteria group	Actinobacteria	10.0317	70.3	-	FZNR01	76	8958	8558	7/13/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06264365	GCA_900188005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/005/GCA_900188005.1_IMG-taxon_2724679777_annotated_assembly	-	DSM 43151
Lutibacter flavus	691689	PRJEB21404	391672	FCB group	Bacteroidetes/Chlorobi group	3.90367	30.1	-	FZNX01	8	3403	3299	7/13/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488111	GCA_900188355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/355/GCA_900188355.1_IMG-taxon_2622736608_annotated_assembly	-	DSM 27993
Haloechinothrix alba	664784	PRJEB21396	391608	Terrabacteria group	Actinobacteria	4.74416	68.7	-	FZNW01	80	4436	4212	7/12/17	7/21/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06265360	GCA_900188115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/115/GCA_900188115.1_IMG-taxon_2724679784_annotated_assembly	-	DSM 45207
Lutibacter agarilyticus	1109740	PRJEB21395	391601	FCB group	Bacteroidetes/Chlorobi group	4.10193	31.2	-	FZNT01	22	3393	3322	7/12/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06265371	GCA_900188235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/235/GCA_900188235.1_IMG-taxon_2724679779_annotated_assembly	-	DSM 29150
Halorubrum vacuolatum	63740	PRJEB21398	391606	Euryarchaeota	Halobacteria	3.47786	62.9	-	FZNQ01	72	3331	3133	7/13/17	7/21/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06264855	GCA_900188065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/065/GCA_900188065.1_IMG-taxon_2724679803_annotated_assembly	-	DSM 8800
Geodermatophilus pulveris	1564159	PRJEB21412	391656	Terrabacteria group	Actinobacteria	4.3792	75.6	-	FZOO01	26	4178	3974	7/13/17	7/21/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06893096	GCA_900188375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/375/GCA_900188375.1_IMG-taxon_2700988693_annotated_assembly	-	DSM 46839
Streptosporangium subroseum	106412	PRJEB21409	391663	Terrabacteria group	Actinobacteria	10.7826	68.8	-	FZOD01	180	9562	8987	7/13/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216276	GCA_900188345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/345/GCA_900188345.1_IMG-taxon_2671180041_annotated_assembly	-	CGMCC 4.2132
Paracoccus sediminis	1214787	PRJEB21389	391611	Proteobacteria	Alphaproteobacteria	3.64575	66	-	FZNM01	40	3574	3457	7/13/17	7/21/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06265378	GCA_900188295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/295/GCA_900188295.1_IMG-taxon_2724679705_annotated_assembly	-	DSM 26170
Rhodobacter megalophilus	418630	PRJEB21429	391647	Proteobacteria	Alphaproteobacteria	4.85821	68.8	-	FZOV01	41	4741	4552	7/13/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421763	GCA_900188265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/265/GCA_900188265.1_IMG-taxon_2681813553_annotated_assembly	-	DSM 18937
Sphingopyxis indica	436663	PRJEB21424	391644	Proteobacteria	Alphaproteobacteria	4.1498	65.7	-	FZPA01	37	3908	3781	7/13/17	7/21/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06295955	GCA_900188185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/185/GCA_900188185.1_IMG-taxon_2706795027_annotated_assembly	-	DS15
Maribacter sedimenticola	228956	PRJEB21402	391666	FCB group	Bacteroidetes/Chlorobi group	4.26936	37.5	-	FZNV01	20	3674	3593	7/13/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488009	GCA_900188415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/415/GCA_900188415.1_IMG-taxon_2622736538_annotated_assembly	-	DSM 19840
Halorubrum chaoviator	335819	PRJNA383467	383467	Euryarchaeota	Halobacteria	3.66542	66.5	-	NDWV01	105	-	-	9/27/17	9/27/17	Contig	"University of Sevilla, Spain"	SAMN06765716	GCA_002379115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/115/GCA_002379115.1_ASM237911v1	-	DSM 19316
Thioclava marina	1915077	PRJNA352314	352314	Proteobacteria	Alphaproteobacteria	3.65333	64.1	-	MPZS01	5	3474	3406	3/6/17	7/29/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05969897	GCA_002020135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/135/GCA_002020135.1_ASM202013v1	-	11.10-0-13
Thioclava sediminum	1915319	PRJNA352386	352386	Proteobacteria	Alphaproteobacteria	4.13128	64	-	MPZV01	8	3928	3833	3/6/17	7/29/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05972914	GCA_002020355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/355/GCA_002020355.1_ASM202035v1	-	TAW-CT134
Actinomadura mexicana	134959	PRJEB21390	391610	Terrabacteria group	Actinobacteria	8.78636	72.3	-	FZNP01	53	7990	7692	7/12/17	7/21/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06265355	GCA_900188105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/105/GCA_900188105.1_IMG-taxon_2724679706_annotated_assembly	-	DSM 44485
Micrococcales bacterium KH10	1945885	PRJEB21439	391637	Terrabacteria group	Actinobacteria	2.8006	60.6	-	FZPE01	6	2418	2314	7/13/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06309944	GCA_900188465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/465/GCA_900188465.1_IMG-taxon_2606217812_annotated_assembly	-	KH10
Pontibacter ummariensis	1610492	PRJEB21422	391646	FCB group	Bacteroidetes/Chlorobi group	5.97373	50.3	-	FZOQ01	80	5080	4942	7/13/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06296052	GCA_900188175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/175/GCA_900188175.1_IMG-taxon_2706794922_annotated_assembly	-	NKM1
Desulfurobacterium atlanticum	240169	PRJEB21405	391671	Aquificae	Aquificae	1.73935	36.5	-	FZOB01	23	1793	1728	7/13/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06265340	GCA_900188395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/395/GCA_900188395.1_IMG-taxon_2724679920_annotated_assembly	-	DSM 15668
Noviherbaspirillum humi	1688639	PRJEB21419	391653	Proteobacteria	Betaproteobacteria	5.38112	63.3	-	FZOT01	56	4811	4656	7/12/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06265795	GCA_900188095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/095/GCA_900188095.1_IMG-taxon_2706794914_annotated_assembly	-	U15
Desulfovibrio mexicanus	147047	PRJEB21403	391665	Proteobacteria	delta/epsilon subdivisions	3.53544	65.7	-	FZOC01	15	3271	3177	7/12/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488503	GCA_900188225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/225/GCA_900188225.1_IMG-taxon_2622736540_annotated_assembly	-	DSM 13116
Geodermatophilus saharensis	1137994	PRJEB21407	391669	Terrabacteria group	Actinobacteria	4.89278	75.5	-	FZOH01	20	4662	4481	7/13/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488107	GCA_900188205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/205/GCA_900188205.1_IMG-taxon_2622736631_annotated_assembly	-	DSM 45423
Puniceibacterium sediminis	1608407	PRJEB21391	391609	Proteobacteria	Alphaproteobacteria	4.64205	60.8	-	FZNN01	69	4233	4034	7/13/17	7/21/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06265370	GCA_900188035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/035/GCA_900188035.1_IMG-taxon_2724679734_annotated_assembly	-	DSM 29052
Antarctobacter heliothermus	74033	PRJEB21415	391661	Proteobacteria	Alphaproteobacteria	5.17437	62.7	-	FZON01	159	5197	4862	7/13/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488078	GCA_900188425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/425/GCA_900188425.1_IMG-taxon_2619619037_annotated_assembly	-	DSM 11445
Streptomyces glauciniger	235986	PRJEB21406	391670	Terrabacteria group	Actinobacteria	9.80866	72.3	-	FZOF01	81	8743	8347	7/13/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216252	GCA_900188405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/405/GCA_900188405.1_IMG-taxon_2671180020_annotated_assembly	-	CGMCC 4.1858
Prevotella jejuni	1177574	PRJEB21399	391605	FCB group	Bacteroidetes/Chlorobi group	3.64694	41.8	-	FZNZ01	92	2898	2640	7/14/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06265364	GCA_900187995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/995/GCA_900187995.1_IMG-taxon_2724679806_annotated_assembly	-	DSM 26989
Actinomadura meyerae	240840	PRJEB21414	391654	Terrabacteria group	Actinobacteria	8.57296	72.9	-	FZOR01	121	7818	7527	7/12/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05443665	GCA_900188445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/445/GCA_900188445.1_IMG-taxon_2700988714_annotated_assembly	-	DSM 44715
Granulicella rosea	474952	PRJEB21426	391650	Acidobacteria	Acidobacteriia	5.29378	62.9	-	FZOU01	24	4341	4214	7/13/17	7/21/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421770	GCA_900188085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/085/GCA_900188085.1_IMG-taxon_2681813547_annotated_assembly	-	DSM 18704
Hymenobacter mucosus	1411120	PRJEB21392	391604	FCB group	Bacteroidetes/Chlorobi group	5.53494	55.8	-	FZNS01	35	4682	4585	7/13/17	7/21/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06269173	GCA_900188255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/255/GCA_900188255.1_IMG-taxon_2724679735_annotated_assembly	-	DSM 28041
Amphiplicatus metriothermophilus	1519374	PRJEB21773	394092	Proteobacteria	Alphaproteobacteria	3.16073	66.7	-	FZQA01	18	2998	2892	7/14/17	7/21/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06297382	GCA_900199215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/199/215/GCA_900199215.1_IMG-taxon_2737472027_annotated_assembly	-	CGMCC 1.12710
Paracoccus seriniphilus	184748	PRJEB21771	394094	Proteobacteria	Alphaproteobacteria	4.19549	61.6	-	FZQB01	60	4017	3844	7/14/17	7/21/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444959	GCA_900199195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/199/195/GCA_900199195.1_IMG-taxon_2737471638_annotated_assembly	-	DSM 14827
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31278	57.2358	chromosome 1:NZ_CP018526.1/CP018526.1; chromosome 2:NZ_CP018527.1/CP018527.1	-	2	3370	3145	6/13/17	6/15/17	Complete Genome	"Bundeswehr, Institute of Microbiology"	SAMN05932953	GCA_002192095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/095/GCA_002192095.1_ASM219209v1	28388689	BwIM_SYR_26
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31252	57.2358	chromosome 1:NZ_CP018554.1/CP018554.1; chromosome 2:NZ_CP018555.1/CP018555.1	-	2	3373	3144	6/13/17	6/15/17	Complete Genome	"Bundeswehr, Institute of Microbiology"	SAMN05932976	GCA_002192155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/155/GCA_002192155.1_ASM219215v1	28388689	BwIM_TUR_39
Blautia coccoides	1532	PRJNA289613	289613	Terrabacteria group	Firmicutes	5.12858	45.7	chromosome:NZ_CP022713.1/CP022713.1	-	1	4822	4507	8/9/17	8/17/17	Chromosome	Max von Pettenkofer-Institut	SAMN03854117	GCA_002221555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/555/GCA_002221555.2_ASM222155v2	-	YL58
Turicimonas muris	1796652	PRJNA289613	289613	Proteobacteria	Betaproteobacteria	2.88771	44.1	-	NHMP01	20	2631	2478	7/19/17	7/21/17	Contig	Max von Pettenkofer-Institut	SAMN03856237	GCA_002221595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/595/GCA_002221595.1_ASM222159v1	-	YL45
Flavobacterium araucananum	946678	PRJNA354433	354433	FCB group	Bacteroidetes/Chlorobi group	5.89674	34.4	-	MUGS01	139	4937	4768	7/20/17	7/22/17	Scaffold	FDA	SAMN06049049	GCA_002222055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/222/055/GCA_002222055.1_ASM222205v1	-	DSM 24704
Brucella melitensis	29459	PRJNA289971	289971	Proteobacteria	Alphaproteobacteria	3.31079	57.2358	chromosome I:NZ_CP019679.1/CP019679.1; chromosome II:NZ_CP019680.1/CP019680.1	-	2	3383	3099	2/10/17	4/6/17	Complete Genome	Stavropol Plague Control Reseach Institute	SAMN03860331	GCA_001307475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/475/GCA_001307475.2_ASM130747v2	-	C-573
Polynucleobacter cosmopolitanus	351345	PRJNA295639	295639	Proteobacteria	Betaproteobacteria	1.77598	44.1	-	NJGG01	6	1810	1758	7/24/17	7/28/17	Contig	University of Innsbruck	SAMN04086697	GCA_002224225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/225/GCA_002224225.1_ASM222422v1	-	MWH-MoIso2
Brucella melitensis	29459	PRJNA243300	243300	Proteobacteria	Alphaproteobacteria	3.31188	57.2358	chromosome 1:NZ_CP008750.1/CP008750.1; chromosome 2:NZ_CP008751.1/CP008751.1	-	2	3381	3140	11/4/15	4/4/17	Complete Genome	Shanghai JiaoTong University School of Medicine	SAMN02714221	GCA_001431745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/745/GCA_001431745.1_ASM143174v1	-	20236
Brucella melitensis M5-90	703352	PRJNA42891	42891	Proteobacteria	Alphaproteobacteria	3.31223	57.2358	chromosome I:NC_017246.1/CP001851.1; chromosome II:NC_017247.1/CP001852.1	-	2	3381	3124	3/22/11	3/30/17	Complete Genome	"National Key Laboratory of Veterinary Biotechnology , Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences"	SAMN02603654	GCA_000192885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/885/GCA_000192885.1_ASM19288v1	21478357	M5-90
Perlucidibaca aquatica	1852776	PRJNA322579	322579	Proteobacteria	Gammaproteobacteria	2.49292	55.7	-	LZDB01	6	2409	2342	6/25/16	8/3/17	Contig	Nakdonggang National Institute of Biological Resources	SAMN05170437	GCA_001676655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/655/GCA_001676655.1_ASM167665v1	-	BK296
Merdimonas faecis	1653435	PRJNA283565	283565	Terrabacteria group	Firmicutes	3.31822	47	-	MIEH01	64	3270	3137	10/7/16	8/3/17	Contig	Seoul National University	SAMN05727926	GCA_001754075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/754/075/GCA_001754075.1_ASM175407v1	-	BR31
Pantoea latae	1964541	PRJNA376797	376797	Proteobacteria	Gammaproteobacteria	4.96042	59.6	-	MWUE01	83	4676	4515	4/3/17	8/3/17	Contig	University of Central Florida	SAMN06446882	GCA_002077695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/695/GCA_002077695.1_ASM207769v1	28705985	AS1
Paenibacillus herberti	1619309	PRJNA394041	394041	Terrabacteria group	Firmicutes	5.41423	51	-	NMUQ01	17	4852	4638	7/26/17	7/28/17	Scaffold	Capital Normal University	SAMN07356179	GCA_002233675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/675/GCA_002233675.1_ASM223367v1	-	R33
Haloparvum sedimenti	1678448	PRJNA294239	294239	Euryarchaeota	Halobacteria	3.24305	68.2	-	LKIR01	143	3250	2971	12/8/15	8/8/17	Scaffold	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN04018174	GCA_001462205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/205/GCA_001462205.1_HalopeDYS1.0	-	DYS4
Amycolatopsis thailandensis	589330	PRJNA392991	392991	Terrabacteria group	Actinobacteria	9.34826	68.8	-	NMQT01	421	8467	8112	7/27/17	8/1/17	Contig	Institute of Microbial Technology	SAMN07313357	GCA_002234405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/234/405/GCA_002234405.1_ASM223440v1	-	JCM 16380
Brucella melitensis M28	941967	PRJNA61505	61505	Proteobacteria	Alphaproteobacteria	3.31175	57.2358	chromosome 1:NC_017244.1/CP002459.1; chromosome 2:NC_017245.1/CP002460.1	-	2	3381	3144	3/18/11	3/30/17	Complete Genome	"National Key Laboratory of Veterinary Biotechnology , Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences"	SAMN02603655	GCA_000192725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/725/GCA_000192725.1_ASM19272v1	21478357	M28
Paenibacillus rigui	554312	PRJNA393491	393491	Terrabacteria group	Firmicutes	7.17283	50.3	-	NMQW01	106	6350	6119	7/27/17	8/1/17	Contig	Institute of Microbial Technology	SAMN07334579	GCA_002234615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/234/615/GCA_002234615.1_ASM223461v1	-	JCM 16352
Hymenobacter coccineus	1908235	PRJNA335956	335956	FCB group	Bacteroidetes/Chlorobi group	5.70092	63.1	-	MDZA01	459	5042	4531	10/21/16	8/8/17	Contig	Masaryk University	SAMN05447638	GCA_001816125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/125/GCA_001816125.1_ASM181612v1	28629503	CCM 8649
Hymenobacter lapidarius	1908237	PRJNA335954	335954	FCB group	Bacteroidetes/Chlorobi group	4.66208	61	-	MDZB01	175	4011	3774	10/21/16	8/21/17	Contig	Masaryk University	SAMN05468008	GCA_001816145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/145/GCA_001816145.1_ASM181614v1	28629503	CCM 8643
Hymenobacter glacialis	1908236	PRJNA335955	335955	FCB group	Bacteroidetes/Chlorobi group	4.23168	60.5	-	MDZC01	133	3565	3375	10/21/16	8/21/17	Contig	Masaryk University	SAMN05468011	GCA_001816165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/165/GCA_001816165.1_ASM181616v1	28629503	CCM 8648
Brucella melitensis ATCC 23457	546272	PRJNA30561	30561	Proteobacteria	Alphaproteobacteria	3.31122	57.2358	chromosome I:NC_012441.1/CP001488.1; chromosome II:NC_012442.1/CP001489.1	-	2	3383	3152	3/25/09	3/30/17	Complete Genome	Virginia Bioinformatics Institute	SAMN02604296	GCA_000022625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/625/GCA_000022625.1_ASM2262v1	-	ATCC 23457
Brucella canis	36855	PRJNA338463	338463	Proteobacteria	Alphaproteobacteria	3.27759	57.2357	chromosome 1:NZ_CP016977.1/CP016977.1; chromosome 2:NZ_CP016978.1/CP016978.1	-	2	3325	3118	8/29/16	4/5/17	Complete Genome	Viginia Tech	SAMN05559077	GCA_001715405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/405/GCA_001715405.1_ASM171540v1	-	2010009751
Brucella melitensis bv. 1 str. 16M	224914	PRJNA243895	243895	Proteobacteria	Alphaproteobacteria	3.29478	57.2357	chromosome 1:NZ_CP007763.1/CP007763.1; chromosome 2:NZ_CP007762.1/CP007762.1	-	2	3372	3134	8/15/14	4/2/17	Complete Genome	Los Alamos National Laboratory	SAMN02795970	GCA_000740415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/415/GCA_000740415.1_ASM74041v1	25237024	16M
Acetobacterium sp. MES1	1899015	PRJNA245339	245339	Terrabacteria group	Firmicutes	3.64861	44.3	-	MJUY01	61	3398	3267	7/31/17	7/31/17	Contig	Argonne National Laboratory	SAMN05420128	GCA_002237635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/635/GCA_002237635.1_ACETO_MES1	-	-
Notoacmeibacter marinus	1876515	PRJNA381510	381510	Proteobacteria	Alphaproteobacteria	3.29218	61.5	-	NBYO01	3	3157	3075	8/1/17	8/3/17	Contig	"Third Institute of Oceanography, SOA"	SAMN06678465	GCA_002238045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/045/GCA_002238045.1_ASM223804v1	28771124	XMTR2A4
Desulfurellaceae bacterium bin18	1919258	PRJNA326328	326328	Proteobacteria	delta/epsilon subdivisions	5.24332	57.8	-	MPMI01	83	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959505	GCA_002238415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/415/GCA_002238415.1_ASM223841v1	28696422	-
Chloroflexi bacterium bin20	1916092	PRJNA326328	326328	Terrabacteria group	Chloroflexi	3.66168	59.3	-	MPMG01	22	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05958607	GCA_002238485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/485/GCA_002238485.1_ASM223848v1	28696422	-
bacterium EC214 bin63	1916139	PRJNA326328	326328	unclassified Bacteria	unclassified Bacteria (miscellaneous)	2.33778	50.4	-	MPMH01	150	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959504	GCA_002238465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/465/GCA_002238465.1_ASM223846v1	28696422	-
SAR202 cluster bacterium bin22	1916129	PRJNA326328	326328	Terrabacteria group	Chloroflexi	4.39325	59.2	-	MPMM01	58	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959503	GCA_002238505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/505/GCA_002238505.1_ASM223850v1	28696422	-
Flavobacteriaceae bacterium bin25	1919260	PRJNA326328	326328	FCB group	Bacteroidetes/Chlorobi group	2.9582	36.2	-	MPMN01	124	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959502	GCA_002238525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/525/GCA_002238525.1_ASM223852v1	28696422	-
Caldilineaceae bacterium bin34	1919271	PRJNA326328	326328	Terrabacteria group	Chloroflexi	4.63026	63.1	-	MPMO01	111	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959509	GCA_002238555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/555/GCA_002238555.1_ASM223855v1	28696422	-
SAR202 cluster bacterium bin16	1916130	PRJNA326328	326328	Terrabacteria group	Chloroflexi	3.22381	65.6	-	MPMJ01	101	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959506	GCA_002238425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/425/GCA_002238425.1_ASM223842v1	28696422	-
Caldilineaceae bacterium bin5	1919272	PRJNA326328	326328	Terrabacteria group	Chloroflexi	5.55323	58.5	-	MPML01	120	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959508	GCA_002238445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/445/GCA_002238445.1_ASM223844v1	28696422	-
BD2-11 clade cluster bacterium bin43	1916134	PRJNA326328	326328	Proteobacteria	Gammaproteobacteria	4.47284	68	-	MPMR01	65	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959512	GCA_002238605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/605/GCA_002238605.1_ASM223860v1	28696422	-
Kistimonas sp. bin40	1919249	PRJNA326328	326328	Proteobacteria	Gammaproteobacteria	3.78245	57.3	-	MPMQ01	215	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959511	GCA_002238585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/585/GCA_002238585.1_ASM223858v1	28696422	-
Albidovulum sp. bin36	1919248	PRJNA326328	326328	Proteobacteria	Alphaproteobacteria	5.60496	58	-	MPMP01	201	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959510	GCA_002238565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/565/GCA_002238565.1_ASM223856v1	28696422	-
Cyanobacteria bacterium bin9	1919259	PRJNA326328	326328	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.6406	58.7	-	MPMK01	391	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959507	GCA_002238435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/435/GCA_002238435.1_ASM223843v1	28696422	-
bacterium EF100-94H03 bin56	1916141	PRJNA326328	326328	unclassified Bacteria	unclassified Bacteria (miscellaneous)	4.5294	63.7	-	MPMV01	102	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959516	GCA_002238685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/685/GCA_002238685.1_ASM223868v1	28696422	-
Alphaproteobacteria bacterium bin52	1919269	PRJNA326328	326328	Proteobacteria	Alphaproteobacteria	4.20251	66.5	-	MPMT01	120	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959514	GCA_002238645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/645/GCA_002238645.1_ASM223864v1	28696422	-
Rhodospirillaceae bacterium bin65	1919261	PRJNA326328	326328	Proteobacteria	Alphaproteobacteria	4.28841	66.2	-	MPMX01	94	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959518	GCA_002238725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/725/GCA_002238725.1_ASM223872v1	28696422	-
Candidatus Poribacteria bacterium bin70	1919257	PRJNA326328	326328	unclassified Bacteria	Bacteria candidate phyla	5.0972	40.3	-	MPMY01	106	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959519	GCA_002238745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/745/GCA_002238745.1_ASM223874v1	28696422	-
bacterium OM1 bin76	1916140	PRJNA326328	326328	unclassified Bacteria	unclassified Bacteria (miscellaneous)	3.48473	61.6	-	MPNA01	82	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959521	GCA_002238785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/785/GCA_002238785.1_ASM223878v1	28696422	-
Acidobacteria bacterium bin61	1916148	PRJNA326328	326328	Acidobacteria	unclassified Acidobacteria	2.88015	67.6	-	MPMW01	207	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959517	GCA_002238705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/705/GCA_002238705.1_ASM223870v1	28696422	-
SAR202 cluster bacterium bin87	1916131	PRJNA326328	326328	Terrabacteria group	Chloroflexi	4.95814	62.8	-	MPNC01	67	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959523	GCA_002238825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/825/GCA_002238825.1_ASM223882v1	28696422	-
Gammaproteobacteria bacterium bin55	1919270	PRJNA326328	326328	Proteobacteria	Gammaproteobacteria	2.92719	47.3	-	MPMU01	183	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959515	GCA_002238665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/665/GCA_002238665.1_ASM223866v1	28696422	-
Gemmatimonadetes bacterium bin94	1916146	PRJNA326328	326328	FCB group	Gemmatimonadetes	4.42054	66.9	-	MPNE01	83	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959525	GCA_002238865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/865/GCA_002238865.1_ASM223886v1	28696422	-
SAR202 cluster bacterium bin90	1916132	PRJNA326328	326328	Terrabacteria group	Chloroflexi	4.60632	57.1	-	MPND01	213	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959524	GCA_002238855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/855/GCA_002238855.1_ASM223885v1	28696422	-
Spirochaetaceae bacterium bin103	1919263	PRJNA326328	326328	Spirochaetes	Spirochaetia	4.7769	67.4	-	MPNH01	96	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959528	GCA_002238925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/925/GCA_002238925.1_ASM223892v1	28696422	-
Rhodothermaceae bacterium bin80	1919262	PRJNA326328	326328	FCB group	Bacteroidetes/Chlorobi group	4.07749	51	-	MPNB01	192	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959522	GCA_002238805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/805/GCA_002238805.1_ASM223880v1	28696422	-
Alphaproteobacteria bacterium bin98	1919268	PRJNA326328	326328	Proteobacteria	Alphaproteobacteria	1.58348	40.6	-	MPNG01	105	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959527	GCA_002238905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/905/GCA_002238905.1_ASM223890v1	28696422	-
Proteobacteria bacterium bin106	1919266	PRJNA326328	326328	Proteobacteria	unclassified Proteobacteria	2.59005	39.6	-	MPNI01	148	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959529	GCA_002238945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/945/GCA_002238945.1_ASM223894v1	28696422	-
Nitrospinae bacterium bin107	1919264	PRJNA326328	326328	Nitrospinae/Tectomicrobia group	Nitrospinae	4.37217	59.5	-	MPNJ01	60	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959530	GCA_002238965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/965/GCA_002238965.1_ASM223896v1	28696422	-
Truepera sp. bin119	1919250	PRJNA326328	326328	Terrabacteria group	Deinococcus-Thermus	3.21132	62.2	-	MPNL01	91	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959532	GCA_002239005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/005/GCA_002239005.1_ASM223900v1	28696422	-
SAR202 cluster bacterium bin127	1916135	PRJNA326328	326328	Terrabacteria group	Chloroflexi	3.01777	56.3	-	MPNN01	21	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959534	GCA_002239045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/045/GCA_002239045.1_ASM223904v1	28696422	-
Chloroflexi bacterium bin125	1916145	PRJNA326328	326328	Terrabacteria group	Chloroflexi	3.68167	62.3	-	MPNM01	66	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959533	GCA_002239025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/025/GCA_002239025.1_ASM223902v1	28696422	-
Candidatus Poribacteria bacterium bin44	1916150	PRJNA326328	326328	unclassified Bacteria	Bacteria candidate phyla	7.04387	47.2	-	MPMS01	465	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959513	GCA_002238625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/625/GCA_002238625.1_ASM223862v1	28696422	-
Defluviicoccus sp. bin129	1919251	PRJNA326328	326328	Proteobacteria	Alphaproteobacteria	4.83132	69.5	-	MPNO01	122	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959535	GCA_002239065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/065/GCA_002239065.1_ASM223906v1	28696422	-
marine group bacterium Sva0996 bin134	1916143	PRJNA326328	326328	unclassified Bacteria	unclassified Bacteria (miscellaneous)	3.68452	64.3	-	MPNQ01	77	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959537	GCA_002239105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/105/GCA_002239105.1_ASM223910v1	28696422	-
bacterium TK85 bin110	1916144	PRJNA326328	326328	unclassified Bacteria	unclassified Bacteria (miscellaneous)	6.22384	67.5	-	MPNK01	758	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959531	GCA_002238985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/985/GCA_002238985.1_ASM223898v1	28696422	-
Alphaproteobacteria bacterium bin95	1919267	PRJNA326328	326328	Proteobacteria	Alphaproteobacteria	3.41475	66.3	-	MPNF01	582	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959526	GCA_002238885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/885/GCA_002238885.1_ASM223888v1	28696422	-
Phycisphaerae bacterium SM-PulAB-D3	1941348	PRJNA369379	369379	PVC group	Planctomycetes	3.06329	46.4	-	NHPQ01	59	2389	2287	8/1/17	8/21/17	Scaffold	Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures	SAMN06284588	GCA_002239625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/625/GCA_002239625.1_ASM223962v1	-	SM-PulAB-D3
Rhodobacteraceae bacterium bin131	1919265	PRJNA326328	326328	Proteobacteria	Alphaproteobacteria	3.74452	42	-	MPNP01	416	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959536	GCA_002239085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/085/GCA_002239085.1_ASM223908v1	28696422	-
Brucella canis HSK A52141	1104321	PRJNA74683	74683	Proteobacteria	Alphaproteobacteria	3.27751	57.2357	chromosome 1:NC_016778.1/CP003174.1; chromosome 2:NC_016796.1/CP003175.1	-	2	3331	3130	12/15/11	3/30/17	Complete Genome	Macrogen	SAMN02603578	GCA_000238195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/195/GCA_000238195.1_ASM23819v1	22933762	A52141
Paenibacillus physcomitrellae	1619311	PRJNA386596	386596	Terrabacteria group	Firmicutes	4.82866	50.7	chromosome:NZ_CP022584.1/CP022584.1	-	1	4359	4170	8/2/17	8/28/17	Chromosome	Capital Normal University	SAMN07108741	GCA_002240225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/225/GCA_002240225.1_ASM224022v1	-	XB
Pedobacter psychrophilus	1826909	PRJNA317620	317620	FCB group	Bacteroidetes/Chlorobi group	3.99914	32.5	-	LWHJ01	33	3487	3394	5/26/16	8/15/17	Contig	Masaryk University	SAMN04622366	GCA_001652725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/725/GCA_001652725.1_ASM165272v1	-	CCM 8644
Vibrio sp. V03_P4A6T147	1938658	PRJNA361511	361511	Proteobacteria	Gammaproteobacteria	3.4748	45.2	-	NDIO01	424	3206	2994	8/4/17	8/6/17	Scaffold	Instituto de ecologia	SAMN06251399	GCA_002241085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/085/GCA_002241085.1_ASM224108v1	-	V03_P4A6T147
Thiomonas delicata	364030	PRJEB14160	395868	Proteobacteria	Betaproteobacteria	3.84114	65.5	-	FLMQ01	54	3599	3451	7/26/17	8/7/17	Scaffold	Genoscope CEA	SAMEA4025135	GCA_900088825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/825/GCA_900088825.1_BBA-D_PRJEB14160_v1	-	DSM 16361
Ruaniaceae bacterium KH17	1945888	PRJEB21848	395189	Terrabacteria group	Actinobacteria	2.72438	64.9	-	FZQV01	72	2540	2391	7/29/17	8/7/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06298212	GCA_900199505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/199/505/GCA_900199505.1_IMG-taxon_2623620518_annotated_assembly	-	KH17
Prevotellaceae bacterium KH2P17	1945886	PRJEB21846	395191	FCB group	Bacteroidetes/Chlorobi group	3.30391	53.1	-	FZRE01	40	2655	2538	7/29/17	8/7/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06298210	GCA_900199655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/199/655/GCA_900199655.1_IMG-taxon_2623620487_annotated_assembly	-	KH2P17
Prevotellaceae bacterium MN60	1945887	PRJEB21845	395192	FCB group	Bacteroidetes/Chlorobi group	2.7377	46	-	FZQZ01	24	2267	2177	7/29/17	8/7/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06298211	GCA_900199555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/199/555/GCA_900199555.1_IMG-taxon_2623620474_annotated_assembly	-	MN60
Oceanimonas doudoroffii	84158	PRJNA380792	380792	Proteobacteria	Gammaproteobacteria	3.83294	60	-	NBIM01	19	3627	3514	8/7/17	8/9/17	Contig	University of New Hampshire - Manchester	SAMN06648056	GCA_002242685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/685/GCA_002242685.1_ASM224268v1	-	ATCC 27123
Brucella melitensis NI	1029825	PRJNA66633	66633	Proteobacteria	Alphaproteobacteria	3.29447	57.2357	chromosome I:NC_017248.1/CP002931.1; chromosome II:NC_017283.1/CP002932.1	-	2	3367	3115	10/6/11	3/30/17	Complete Genome	China Agricultrual University	SAMN02603116	GCA_000227645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/645/GCA_000227645.1_ASM22764v1	23105063	NI
Brucella melitensis bv. 1 str. 16M	224914	PRJNA180	180	Proteobacteria	Alphaproteobacteria	3.29493	57.2357	chromosome I:NC_003317.1/AE008917.1; chromosome II:NC_003318.1/AE008918.1	-	2	3369	3099	11/13/01	3/29/17	Complete Genome	Integrated Genomics	SAMN02603416	GCA_000007125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/125/GCA_000007125.1_ASM712v1	11756688	16M
Brucella sp. 2002734562	1891098	PRJNA338952	338952	Proteobacteria	Alphaproteobacteria	3.28349	57.2354	chromosome 1:NZ_CP016979.1/CP016979.1; chromosome 2:NZ_CP016980.1/CP016980.1	-	2	3377	3152	8/29/16	4/13/17	Complete Genome	Viginia Tech	SAMN05577733	GCA_001715385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/385/GCA_001715385.1_ASM171538v1	-	2002734562
Paludifilum halophilum	1642702	PRJNA395604	395604	Terrabacteria group	Firmicutes	3.78977	51.5	-	NOWF01	213	3691	3527	8/9/17	8/12/17	Contig	University of Neuchatel	SAMN07411558	GCA_002245355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/355/GCA_002245355.1_ASM224535v1	-	DSM 102817
Brucella abortus 104M	1210454	PRJNA263969	263969	Proteobacteria	Alphaproteobacteria	3.28543	57.2354	chromosome 1:NZ_CP009625.1/CP009625.1; chromosome 2:NZ_CP009626.1/CP009626.1	-	2	3370	3152	9/22/15	3/26/17	Complete Genome	Beijing Institute of Biotechnology	SAMN03108762	GCA_001296965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/965/GCA_001296965.1_ASM129696v1	26039674	104M
Mogibacterium pumilum	86332	PRJNA282954	282954	Terrabacteria group	Firmicutes	1.86277	41.1	chromosome:NZ_CP016199.1/CP016199.1	-	1	1775	1585	8/8/17	8/10/17	Chromosome	The Forsyth Institute	SAMN03897725	GCA_002243385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/385/GCA_002243385.1_ASM224338v1	-	ATCC 700696
Brucella abortus	235	PRJNA243875	243875	Proteobacteria	Alphaproteobacteria	3.28852	57.2354	chromosome 1:NZ_CP007682.1/CP007682.1; chromosome 2:NZ_CP007683.1/CP007683.1	-	2	3369	3130	8/15/14	3/24/17	Complete Genome	Los Alamos National Laboratory	SAMN02767934	GCA_000740155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/155/GCA_000740155.1_ASM74015v1	25237024	BER
candidate division WOR-3 bacterium JGI_Cruoil_03_51_56	1973747	PRJNA249643	249643	unclassified Bacteria	Bacteria candidate phyla	2.08409	51.1	-	NOZP01	190	2020	1939	8/10/17	8/10/17	Scaffold	DOE Joint Genome Institute	SAMN06887668	GCA_002245415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/415/GCA_002245415.1_ASM224541v1	-	-
candidate division WOR-3 bacterium JGI_Cruoil_03_44_89	1973748	PRJNA249643	249643	unclassified Bacteria	Bacteria candidate phyla	2.48495	44.2	-	NOZQ01	230	2153	2082	8/10/17	8/10/17	Scaffold	DOE Joint Genome Institute	SAMN06887669	GCA_002245405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/405/GCA_002245405.1_ASM224540v1	-	-
Oceanimonas baumannii	129578	PRJNA380793	380793	Proteobacteria	Gammaproteobacteria	3.80933	55.9	-	NQJF01	70	3616	3461	8/10/17	8/12/17	Contig	University of New Hampshire - Manchester	SAMN06648058	GCA_002245495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/495/GCA_002245495.1_ASM224549v1	-	ATCC 700832
Methylobacterium indicum	1775910	PRJNA268287	268287	Proteobacteria	Alphaproteobacteria	6.93082	70.4	-	JTHG01	560	6435	5954	6/30/15	7/24/17	Contig	CSIR-Institute of Microbial Technology	SAMN03217761	GCA_001043875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/875/GCA_001043875.1_ASM104387v1	26776106	SE3.6
Massilimaliae sp. Marseille-P3753	1987501	PRJEB20854	395180	Terrabacteria group	Firmicutes	2.70706	46.9	-	FYDD01	4	2626	2518	7/21/17	8/1/17	Contig	URMITE	SAMEA104125940	GCA_900186585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/585/GCA_900186585.1_PRJEB20854	-	Marseille-P3753
Loktanella marina	1819565	PRJEB21024	395524	Proteobacteria	Alphaproteobacteria	4.79257	62.2	-	FXZK01	56	4588	4447	7/23/17	8/1/17	Contig	UVEG	SAMEA104102533	GCA_900184895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/184/895/GCA_900184895.1_L.marina_CECT8899_Spades_Prokka	-	CECT 8899
Maliponia aquimaris	1673631	PRJEB21023	395525	Proteobacteria	Alphaproteobacteria	5.31398	67.2	-	FXYF01	56	5111	4943	7/23/17	8/1/17	Contig	UVEG	SAMEA104102235	GCA_900184945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/184/945/GCA_900184945.1_M.aquimaris_CECT8898_Spades_Prokka	-	CECT 8898
Octadecabacter ascidiaceicola	1655543	PRJEB21022	395526	Proteobacteria	Alphaproteobacteria	3.23306	54.9	-	FXYD01	11	3286	3190	7/23/17	8/1/17	Contig	UVEG	SAMEA104102234	GCA_900185015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/015/GCA_900185015.1_O.ascidiaceicola_CECT8868_Spades_Prokka	-	CECT 8868
Confluentimicrobium lipolyticum	1524263	PRJEB21019	395528	Proteobacteria	Alphaproteobacteria	3.87774	57.7	-	FXYE01	11	3783	3696	7/23/17	8/1/17	Contig	UVEG	SAMEA104098236	GCA_900184935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/184/935/GCA_900184935.1_C.lipolyticum_CECT8621_Spades_Prokka	-	CECT 8621
Ruegeria arenilitoris	1173585	PRJEB21021	395521	Proteobacteria	Alphaproteobacteria	3.87191	61.3	-	FXYG01	11	3836	3747	7/23/17	8/1/17	Contig	UVEG	SAMEA104102142	GCA_900185035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/035/GCA_900185035.1_R.arenilitoris_CECT8715_Spades_Prokka	-	CECT 8715
Boseongicola aestuarii	1470561	PRJEB21017	395527	Proteobacteria	Alphaproteobacteria	4.00127	57.9	-	FXXQ01	69	4015	3893	7/23/17	8/1/17	Contig	UVEG	SAMEA104098235	GCA_900184815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/184/815/GCA_900184815.1_B.aestuarii_CECT8489_Spades_Prokka	-	CECT 8489
Brucella abortus	235	PRJNA244264	244264	Proteobacteria	Alphaproteobacteria	3.28529	57.2354	chromosome 1:NZ_CP007700.1/CP007700.1; chromosome 2:NZ_CP007701.1/CP007701.1	-	2	3371	3140	8/15/14	3/24/17	Complete Genome	Los Alamos National Laboratory	SAMN02769901	GCA_000740175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/175/GCA_000740175.1_ASM74017v1	25237024	NCTC 10505
Mycoplasma testudineum	244584	PRJNA394956	394956	Terrabacteria group	Tenericutes	0.960895	27.6	-	NNCE01	25	825	782	8/10/17	8/12/17	Scaffold	"University of Nevada, Reno"	SAMN07367954	GCA_002245785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/785/GCA_002245785.1_ASM224578v1	-	BH29
Brucella abortus	235	PRJNA244261	244261	Proteobacteria	Alphaproteobacteria	3.28816	57.2354	chromosome 1:NZ_CP007738.1/CP007738.1; chromosome 2:NZ_CP007737.1/CP007737.1	-	2	3365	3127	8/15/14	3/24/17	Complete Genome	Los Alamos National Laboratory	SAMN02786918	GCA_000740315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/315/GCA_000740315.1_ASM74031v1	25237024	BFY
Propionibacteriaceae bacterium NML 160184	2016506	PRJNA344498	344498	Terrabacteria group	Actinobacteria	3.02209	68.1	-	NMVI01	29	2781	2659	8/14/17	8/16/17	Contig	Public Health Agency of Canada	SAMN07253282	GCA_002250475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/475/GCA_002250475.1_ASM225047v1	-	NML 160184
Propionibacteriaceae bacterium NML 150272	2016504	PRJNA344498	344498	Terrabacteria group	Actinobacteria	4.48353	69.2	-	NMVK01	37	4201	4069	8/14/17	8/16/17	Contig	Public Health Agency of Canada	SAMN07253280	GCA_002250525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/525/GCA_002250525.1_ASM225052v1	-	NML 150272
Propionibacteriaceae bacterium NML 140250	2016503	PRJNA344498	344498	Terrabacteria group	Actinobacteria	4.47935	69.4	-	NMVL01	30	4187	4050	8/14/17	8/16/17	Contig	Public Health Agency of Canada	SAMN07253279	GCA_002250545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/545/GCA_002250545.1_ASM225054v1	-	NML 140250
Propionibacteriaceae bacterium NML 150081	2016505	PRJNA344498	344498	Terrabacteria group	Actinobacteria	3.05253	68	-	NMVJ01	13	2778	2659	8/14/17	8/16/17	Contig	Public Health Agency of Canada	SAMN07253281	GCA_002250565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/565/GCA_002250565.1_ASM225056v1	-	NML 150081
Propionibacteriaceae bacterium NML 090529	2016502	PRJNA344498	344498	Terrabacteria group	Actinobacteria	4.47638	69.5	-	NMVM01	9	4208	4096	8/14/17	8/16/17	Contig	Public Health Agency of Canada	SAMN07253278	GCA_002250585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/585/GCA_002250585.1_ASM225058v1	-	NML 090529
Propionibacteriaceae bacterium NML 061049	2016501	PRJNA344498	344498	Terrabacteria group	Actinobacteria	4.56782	69.4	-	NMVN01	18	4305	4175	8/14/17	8/16/17	Contig	Public Health Agency of Canada	SAMN07253277	GCA_002250605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/605/GCA_002250605.1_ASM225060v1	-	NML 061049
Propionibacteriaceae bacterium NML 130396	2016507	PRJNA344498	344498	Terrabacteria group	Actinobacteria	3.72077	69.6	-	NMVQ01	47	3620	3437	8/14/17	8/16/17	Contig	Public Health Agency of Canada	SAMN07253283	GCA_002250625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/625/GCA_002250625.1_ASM225062v1	-	NML 130396
Propionibacteriaceae bacterium NML 030167	2016500	PRJNA344498	344498	Terrabacteria group	Actinobacteria	4.53728	69.4	-	NMVO01	19	4277	4150	8/14/17	8/16/17	Contig	Public Health Agency of Canada	SAMN07253276	GCA_002250645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/645/GCA_002250645.1_ASM225064v1	-	NML 030167
Mycobacterium sphagni	1786	PRJNA395055	395055	Terrabacteria group	Actinobacteria	6.06698	65.9	-	NOZR01	78	5880	5686	8/14/17	8/16/17	Contig	San Raffaele Scientific Institute	SAMN07372526	GCA_002250655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/655/GCA_002250655.1_ASM225065v1	-	ATCC 33027
Propionibacteriaceae bacterium NML 020265	2016499	PRJNA344498	344498	Terrabacteria group	Actinobacteria	4.43357	69.5	-	NMVP01	38	4180	4024	8/14/17	8/16/17	Contig	Public Health Agency of Canada	SAMN07253275	GCA_002250705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/705/GCA_002250705.1_ASM225070v1	-	NML 020265
Lachnotalea glycerini	1763509	PRJNA395025	395025	Terrabacteria group	Firmicutes	4.69423	34.6	-	NOKA01	124	4199	4002	8/14/17	8/16/17	Contig	CHU de Quebec - Universite Laval	SAMN07368620	GCA_002251225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/225/GCA_002251225.1_ASM225122v1	-	CCRI-19302
Niveispirillum sp. TH1-14	1981099	PRJNA395962	395962	Proteobacteria	Alphaproteobacteria	4.97323	62.2	-	NOXU01	32	4375	4253	8/14/17	8/16/17	Contig	Nanjing Institute of Geography and Limnology	SAMN07418560	GCA_002251795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/795/GCA_002251795.1_ASM225179v1	-	TH1-14
Weeksella massiliensis	1461577	PRJEB5516	244999	FCB group	Bacteroidetes/Chlorobi group	2.56278	35.9	-	CCMH01	54	2433	2329	9/5/14	8/22/17	Contig	URMITE	SAMEA2658122	GCA_000751595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/595/GCA_000751595.1_Weeksella_massiliensis	-	-
Helicobacter japonicus	425400	PRJNA261711	261711	Proteobacteria	delta/epsilon subdivisions	2.05267	35.8	-	JRMQ01	48	2060	1874	10/2/14	8/22/17	Scaffold	Massachusetts Institute of Technology	SAMN03074667	GCA_000762845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/845/GCA_000762845.1_ASM76284v1	25428971	MIT 01-6451
Ignatzschineria sp. F8392	1980117	PRJNA382997	382997	Proteobacteria	Gammaproteobacteria	2.48899	41.6	-	NEFF01	16	2083	2001	8/15/17	8/17/17	Contig	Centers for Disease Control and Prevention	SAMN06758451	GCA_002252045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/045/GCA_002252045.1_ASM225204v1	-	F8392
Ochrobactrum thiophenivorans	571255	PRJNA391102	391102	Proteobacteria	Alphaproteobacteria	4.36478	51.6	-	NNRJ01	77	4144	3957	8/15/17	8/17/17	Contig	Intercollegiate Faculty of Biotechnology UG&MUG	SAMN07258021	GCA_002252445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/445/GCA_002252445.1_ASM225244v1	-	DSM 7216
Ochrobactrum grignonense	94627	PRJNA391102	391102	Proteobacteria	Alphaproteobacteria	4.83827	54.1	-	NNRL01	169	4584	4336	8/15/17	8/17/17	Contig	Intercollegiate Faculty of Biotechnology UG&MUG	SAMN07258023	GCA_002252505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/505/GCA_002252505.1_ASM225250v1	-	OgA9a
Ochrobactrum lupini	255457	PRJNA391246	391246	Proteobacteria	Alphaproteobacteria	5.58281	56.3	-	NNRN01	65	5392	5162	8/15/17	8/17/17	Contig	Intercollegiate Faculty of Biotechnology UG&MUG	SAMN07259926	GCA_002252535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/535/GCA_002252535.1_ASM225253v1	-	LUP21
Clostridiales bacterium SK-Y3	1792311	PRJNA396427	396427	Terrabacteria group	Firmicutes	3.86318	37.2	-	NPML01	41	3656	3441	8/15/17	8/17/17	Contig	Biogas Institute of Ministry of Agriculture	SAMN07426283	GCA_002252565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/565/GCA_002252565.1_ASM225256v1	-	SK-Y3
Halorubrum halodurans	1383851	PRJNA232799	232799	Euryarchaeota	Halobacteria	3.32012	67.7	-	NHPJ01	143	3293	3050	8/15/17	8/17/17	Scaffold	University of Conn.	SAMN02716035	GCA_002252985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/985/GCA_002252985.1_ASM225298v1	24782836	Cb34
Bacteroidetes bacterium 4572_112	1971630	PRJNA362212	362212	FCB group	Bacteroidetes/Chlorobi group	2.22775	33.7	-	NIUZ01	191	1949	1859	8/16/17	8/16/17	Scaffold	The University of Texas at Austin	SAMN06628288	GCA_002254285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/285/GCA_002254285.1_ASM225428v1	-	-
Bacteroidetes bacterium 4572_77	1972459	PRJNA362212	362212	FCB group	Bacteroidetes/Chlorobi group	4.09413	34.6	-	NIVB01	300	3699	3524	8/16/17	8/16/17	Scaffold	The University of Texas at Austin	SAMN06638405	GCA_002254295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/295/GCA_002254295.1_ASM225429v1	-	-
Bacteroidetes bacterium 4572_114	1971631	PRJNA362212	362212	FCB group	Bacteroidetes/Chlorobi group	2.6526	40.9	-	NIVA01	244	2351	2228	8/16/17	8/16/17	Scaffold	The University of Texas at Austin	SAMN06628289	GCA_002254335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/335/GCA_002254335.1_ASM225433v1	-	-
Candidatus Altiarchaeales archaeon ex4484_96	2012508	PRJNA362212	362212	Euryarchaeota	unclassified Euryarchaeota	0.919319	44.3	-	NJDH01	65	1033	1009	8/16/17	8/16/17	Contig	The University of Texas at Austin	SAMN06647981	GCA_002254405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/405/GCA_002254405.1_ASM225440v1	-	-
Candidatus Pacearchaeota archaeon ex4484_71	2012516	PRJNA362212	362212	DPANN group	Candidatus Pacearchaeota	0.375963	35.4	-	NJDN01	35	496	463	8/16/17	8/16/17	Contig	The University of Texas at Austin	SAMN06647975	GCA_002254395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/395/GCA_002254395.1_ASM225439v1	-	-
Thermoplasmatales archaeon ex4484_6	2012524	PRJNA362212	362212	Euryarchaeota	Thermoplasmata	1.82554	53.8	-	NJDO01	140	1551	1518	8/16/17	8/16/17	Contig	The University of Texas at Austin	SAMN06647974	GCA_002254385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/385/GCA_002254385.1_ASM225438v1	-	-
Candidatus Aenigmarchaeota archaeon ex4484_52	2012504	PRJNA362212	362212	DPANN group	Candidatus Aenigmarchaeota	0.614182	28	-	NJDR01	53	656	621	8/16/17	8/16/17	Contig	The University of Texas at Austin	SAMN06647971	GCA_002254415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/415/GCA_002254415.1_ASM225441v1	-	-
Desulfurococcales archaeon ex4484_42	2012520	PRJNA362212	362212	TACK group	Crenarchaeota	1.87531	38.4	-	NJDT01	154	2138	2046	8/16/17	8/16/17	Contig	The University of Texas at Austin	SAMN06647969	GCA_002254465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/465/GCA_002254465.1_ASM225446v1	-	-
Candidatus Bathyarchaeota archaeon ex4484_40	2012513	PRJNA362212	362212	TACK group	Candidatus Bathyarchaeota	1.13616	51.6	-	NJDU01	117	1331	1267	8/16/17	8/16/17	Scaffold	The University of Texas at Austin	SAMN06647968	GCA_002254475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/475/GCA_002254475.1_ASM225447v1	-	-
Candidatus Pacearchaeota archaeon ex4484_26	2012514	PRJNA362212	362212	DPANN group	Candidatus Pacearchaeota	0.426904	31.8	-	NJDY01	38	527	505	8/16/17	8/16/17	Contig	The University of Texas at Austin	SAMN06647964	GCA_002254495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/495/GCA_002254495.1_ASM225449v1	-	-
Thermoplasmatales archaeon ex4484_30	2012522	PRJNA362212	362212	Euryarchaeota	Thermoplasmata	1.32353	36.6	-	NJDX01	158	1547	1478	8/16/17	8/16/17	Contig	The University of Texas at Austin	SAMN06647965	GCA_002254485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/485/GCA_002254485.1_ASM225448v1	-	-
Candidatus Aenigmarchaeota archaeon ex4484_224	2012503	PRJNA362212	362212	DPANN group	Candidatus Aenigmarchaeota	0.485206	27.7	-	NJEA01	32	621	589	8/16/17	8/16/17	Contig	The University of Texas at Austin	SAMN06647962	GCA_002254545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/545/GCA_002254545.1_ASM225454v1	-	-
Candidatus Altiarchaeales archaeon ex4484_2	2012506	PRJNA362212	362212	Euryarchaeota	unclassified Euryarchaeota	1.3953	45.6	-	NJEG01	53	1535	1481	8/16/17	8/16/17	Scaffold	The University of Texas at Austin	SAMN06647956	GCA_002254565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/565/GCA_002254565.1_ASM225456v1	-	-
Armatimonadetes bacterium CP1_7O	2012634	PRJNA392119	392119	Terrabacteria group	Armatimonadetes	2.45148	59.7	-	NKPU01	470	2493	2412	8/16/17	8/16/17	Contig	California Institute of Technology	SAMN07230128	GCA_002254585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/585/GCA_002254585.1_ASM225458v1	-	-
Armatimonadetes bacterium JP3_11	2012635	PRJNA392119	392119	Terrabacteria group	Armatimonadetes	2.60485	59.4	-	NKPV01	359	2573	2490	8/16/17	8/16/17	Contig	California Institute of Technology	SAMN07230129	GCA_002254605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/605/GCA_002254605.1_ASM225460v1	-	-
Desulfurococcales archaeon ex4484_58	2012521	PRJNA362212	362212	TACK group	Crenarchaeota	1.43203	34.4	-	NJDP01	119	1553	1490	8/16/17	8/16/17	Contig	The University of Texas at Austin	SAMN06647973	GCA_002254665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/665/GCA_002254665.1_ASM225466v1	-	-
Candidatus Aenigmarchaeota archaeon ex4484_56	2012505	PRJNA362212	362212	DPANN group	Candidatus Aenigmarchaeota	0.566759	29	-	NJDQ01	47	691	657	8/16/17	8/16/17	Contig	The University of Texas at Austin	SAMN06647972	GCA_002254685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/685/GCA_002254685.1_ASM225468v1	-	-
Candidatus Woesearchaeota archaeon ex4484_78	2012531	PRJNA362212	362212	DPANN group	Candidatus Woesearchaeota	0.807948	33.8	-	NJDL01	72	947	899	8/16/17	8/16/17	Contig	The University of Texas at Austin	SAMN06647977	GCA_002254705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/705/GCA_002254705.1_ASM225470v1	-	-
archaeon ex4484_74	2012534	PRJNA362212	362212	unclassified Archaea	unclassified Archaea (miscellaneous)	1.01826	37.4	-	NJDM01	123	1156	1110	8/16/17	8/16/17	Scaffold	The University of Texas at Austin	SAMN06647976	GCA_002254715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/715/GCA_002254715.1_ASM225471v1	-	-
Desulfurococcales archaeon ex4484_217_1	2012518	PRJNA362212	362212	TACK group	Crenarchaeota	0.807477	37.2	-	NJED01	74	1003	940	8/16/17	8/16/17	Contig	The University of Texas at Austin	SAMN06647959	GCA_002254745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/745/GCA_002254745.1_ASM225474v1	-	-
Thermoplasmatales archaeon ex4484_36	2012523	PRJNA362212	362212	Euryarchaeota	Thermoplasmata	1.02343	54.2	-	NJDV01	111	1093	1030	8/16/17	8/16/17	Contig	The University of Texas at Austin	SAMN06647967	GCA_002254765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/765/GCA_002254765.1_ASM225476v1	-	-
ANME-1 cluster archaeon ex4572_4	2011131	PRJNA362212	362212	Euryarchaeota	Methanomicrobia	1.01808	53.2	-	NJEM01	95	1104	1009	8/16/17	8/16/17	Scaffold	The University of Texas at Austin	SAMN06647984	GCA_002254785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/785/GCA_002254785.1_ASM225478v1	-	-
Candidatus Pacearchaeota archaeon ex4484_31	2012515	PRJNA362212	362212	DPANN group	Candidatus Pacearchaeota	0.279432	33.1	-	NJDW01	33	356	336	8/16/17	8/16/17	Contig	The University of Texas at Austin	SAMN06647966	GCA_002254805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/805/GCA_002254805.1_ASM225480v1	-	-
Chloracidobacterium sp. CP2_5A	2012633	PRJNA392119	392119	Acidobacteria	Blastocatellia	3.41109	64.2	-	NKPT01	385	3061	2969	8/16/17	8/16/17	Contig	California Institute of Technology	SAMN07230127	GCA_002254845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/845/GCA_002254845.1_ASM225484v1	-	-
Archaeoglobales archaeon ex4484_92	2012529	PRJNA362212	362212	Euryarchaeota	Archaeoglobi	3.40804	38.1	-	NJDI01	320	4002	3686	8/16/17	8/16/17	Contig	The University of Texas at Austin	SAMN06647980	GCA_002254865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/865/GCA_002254865.1_ASM225486v1	-	-
Thermoplasmatales archaeon ex4572_165	2012525	PRJNA362212	362212	Euryarchaeota	Thermoplasmata	1.20347	32.1	-	NJDG01	55	1223	1175	8/16/17	8/16/17	Scaffold	The University of Texas at Austin	SAMN06647982	GCA_002254885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/885/GCA_002254885.1_ASM225488v1	-	-
Thermoprotei archaeon ex4572_64	2012533	PRJNA362212	362212	TACK group	Crenarchaeota	0.681493	34.2	-	NJDF01	75	819	764	8/16/17	8/16/17	Scaffold	The University of Texas at Austin	SAMN06647986	GCA_002254895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/895/GCA_002254895.1_ASM225489v1	-	-
Candidatus Altiarchaeales archaeon ex4484_43	2012507	PRJNA362212	362212	Euryarchaeota	unclassified Euryarchaeota	1.0406	42.9	-	NJDS01	105	1267	1179	8/16/17	8/16/17	Scaffold	The University of Texas at Austin	SAMN06647970	GCA_002254945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/945/GCA_002254945.1_ASM225494v1	-	-
Candidatus Bathyarchaeota archaeon ex4484_231	2012512	PRJNA362212	362212	TACK group	Candidatus Bathyarchaeota	0.880221	46.7	-	NJDZ01	109	1005	969	8/16/17	8/16/17	Contig	The University of Texas at Austin	SAMN06647963	GCA_002254965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/965/GCA_002254965.1_ASM225496v1	-	-
Candidatus Bathyarchaeota archaeon ex4484_218	2012511	PRJNA362212	362212	TACK group	Candidatus Bathyarchaeota	0.628054	33.1	-	NJEB01	80	774	737	8/16/17	8/16/17	Contig	The University of Texas at Austin	SAMN06647961	GCA_002254975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/975/GCA_002254975.1_ASM225497v1	-	-
Desulfurococcales archaeon ex4484_217_2	2012519	PRJNA362212	362212	TACK group	Crenarchaeota	2.14845	37.8	-	NJEC01	212	2493	2399	8/16/17	8/16/17	Contig	The University of Texas at Austin	SAMN06647960	GCA_002254985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/985/GCA_002254985.1_ASM225498v1	-	-
Candidatus Bathyarchaeota archaeon ex4484_135	2012509	PRJNA362212	362212	TACK group	Candidatus Bathyarchaeota	0.976871	58.8	-	NJEJ01	89	1141	1083	8/16/17	8/16/17	Contig	The University of Texas at Austin	SAMN06647950	GCA_002255025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/025/GCA_002255025.1_ASM225502v1	-	-
Candidatus Bathyarchaeota archaeon ex4484_205	2012510	PRJNA362212	362212	TACK group	Candidatus Bathyarchaeota	1.28211	42.1	-	NJEE01	111	1528	1448	8/16/17	8/16/17	Scaffold	The University of Texas at Austin	SAMN06647958	GCA_002255045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/045/GCA_002255045.1_ASM225504v1	-	-
Candidatus Aenigmarchaeota archaeon ex4484_14	2012502	PRJNA362212	362212	DPANN group	Candidatus Aenigmarchaeota	0.74321	39	-	NJEI01	89	931	880	8/16/17	8/16/17	Scaffold	The University of Texas at Austin	SAMN06647952	GCA_002255055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/055/GCA_002255055.1_ASM225505v1	-	-
Desulfurococcales archaeon ex4484_204	2012517	PRJNA362212	362212	TACK group	Crenarchaeota	0.930496	50.1	-	NJEF01	99	1081	1033	8/16/17	8/16/17	Contig	The University of Texas at Austin	SAMN06647957	GCA_002255065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/065/GCA_002255065.1_ASM225506v1	-	-
Thaumarchaeota archaeon ex4484_121	2012532	PRJNA362212	362212	TACK group	Thaumarchaeota	0.871166	51.5	-	NJEK01	72	1026	961	8/16/17	8/16/17	Contig	The University of Texas at Austin	SAMN06647949	GCA_002255105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/105/GCA_002255105.1_ASM225510v1	-	-
Euryarchaeota archaeon ex4484_162	1978125	PRJNA362212	362212	Euryarchaeota	unclassified Euryarchaeota	0.603189	36.5	-	NJEP01	65	689	640	8/16/17	8/16/17	Contig	The University of Texas at Austin	SAMN06647954	GCA_002255125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/125/GCA_002255125.1_ASM225512v1	-	-
Methanosarcinales archaeon ex4484_138	1978123	PRJNA362212	362212	Euryarchaeota	Methanomicrobia	1.07592	46.2	-	NJEQ01	103	1215	1118	8/16/17	8/16/17	Scaffold	The University of Texas at Austin	SAMN06647951	GCA_002255135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/135/GCA_002255135.1_ASM225513v1	-	-
Euryarchaeota archaeon ex4484_178	1978126	PRJNA362212	362212	Euryarchaeota	unclassified Euryarchaeota	0.890663	41.6	-	NJEO01	111	1050	979	8/16/17	8/16/17	Contig	The University of Texas at Austin	SAMN06647955	GCA_002255165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/165/GCA_002255165.1_ASM225516v1	-	-
Acidimicrobiales bacterium 20-64-4	1970484	PRJNA379596	379596	Terrabacteria group	Actinobacteria	0.192988	64.4	-	NCAG01	119	257	243	8/16/17	8/16/17	Scaffold	None	SAMN06622457	GCA_002255185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/185/GCA_002255185.1_ASM225518v1	-	-
Rhodospirillales bacterium 20-58-10	1970564	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	0.580441	57.9	-	NCAO01	60	604	578	8/16/17	8/16/17	Scaffold	None	SAMN06622449	GCA_002255215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/215/GCA_002255215.1_ASM225521v1	-	-
Rhodospirillales bacterium 20-64-7	1970566	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	5.76385	64.3	-	NCAM01	660	5574	5350	8/16/17	8/16/17	Scaffold	None	SAMN06622451	GCA_002255195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/195/GCA_002255195.1_ASM225519v1	-	-
Deltaproteobacteria bacterium 21-66-5	1970506	PRJNA379596	379596	Proteobacteria	delta/epsilon subdivisions	1.85857	66.5	-	NCAY01	1138	2236	2108	8/16/17	8/16/17	Scaffold	None	SAMN06622439	GCA_002255285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/285/GCA_002255285.1_ASM225528v1	-	-
Actinobacteria bacterium 21-64-8	1970488	PRJNA379596	379596	Terrabacteria group	Actinobacteria	1.37737	63	-	NCBD01	249	1536	1466	8/16/17	8/16/17	Contig	None	SAMN06622433	GCA_002255315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/315/GCA_002255315.1_ASM225531v1	-	-
Chromatiales bacterium 21-64-14	1970504	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	3.44989	64.3	-	NCBI01	86	3199	3079	8/16/17	8/16/17	Contig	None	SAMN06622428	GCA_002255365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/365/GCA_002255365.1_ASM225536v1	-	-
Parcubacteria group bacterium 37-58-5	1970250	PRJNA379596	379596	unclassified Bacteria	Bacteria candidate phyla	0.136374	58	-	NCBP01	21	167	154	8/16/17	8/16/17	Scaffold	None	SAMN06622421	GCA_002255385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/385/GCA_002255385.1_ASM225538v1	-	-
Parcubacteria group bacterium 21-58-10	1970249	PRJNA379596	379596	unclassified Bacteria	Bacteria candidate phyla	0.715585	58.1	-	NCBF01	63	801	758	8/16/17	8/16/17	Contig	None	SAMN06622431	GCA_002255405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/405/GCA_002255405.1_ASM225540v1	-	-
Parcubacteria group bacterium 20-58-5	1970247	PRJNA379596	379596	unclassified Bacteria	Bacteria candidate phyla	0.554668	57.5	-	NCAH01	320	752	699	8/16/17	8/16/17	Scaffold	None	SAMN06622456	GCA_002255415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/415/GCA_002255415.1_ASM225541v1	-	-
Gemmatimonadetes bacterium 21-71-4	1970514	PRJNA379596	379596	FCB group	Gemmatimonadetes	2.52327	70	-	NCBA01	1417	3057	2913	8/16/17	8/16/17	Scaffold	None	SAMN06622436	GCA_002255295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/295/GCA_002255295.1_ASM225529v1	-	-
Rhodospirillales bacterium 20-60-12	1970565	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.967	59.9	-	NCAP01	152	2816	2713	8/16/17	8/16/17	Contig	None	SAMN06622448	GCA_002255495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/495/GCA_002255495.1_ASM225549v1	-	-
Actinobacteria bacterium 21-73-9	1970489	PRJNA379596	379596	Terrabacteria group	Actinobacteria	1.95127	72.5	-	NCBE01	194	2082	1987	8/16/17	8/16/17	Scaffold	None	SAMN06622432	GCA_002255565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/565/GCA_002255565.1_ASM225556v1	-	-
Parcubacteria group bacterium 21-54-25	1970248	PRJNA379596	379596	unclassified Bacteria	Bacteria candidate phyla	0.840022	53.5	-	NCBJ01	27	899	837	8/16/17	8/16/17	Contig	None	SAMN06622427	GCA_002255585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/585/GCA_002255585.1_ASM225558v1	-	-
Burkholderiales bacterium 21-58-4	1970495	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	1.08597	58.4	-	NCAU01	738	1344	1254	8/16/17	8/16/17	Scaffold	None	SAMN06622443	GCA_002255705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/705/GCA_002255705.1_ASM225570v1	-	-
Verrucomicrobia bacterium 21-51-4	1970609	PRJNA379596	379596	PVC group	Verrucomicrobia	0.81454	50.6	-	NCAX01	375	918	875	8/16/17	8/16/17	Scaffold	None	SAMN06622440	GCA_002255805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/805/GCA_002255805.1_ASM225580v1	-	-
Ignavibacteriae bacterium 37-53-5	1970532	PRJNA379596	379596	FCB group	Bacteroidetes/Chlorobi group	1.22118	53.3	-	NCBO01	572	1378	1335	8/16/17	8/16/17	Scaffold	None	SAMN06622422	GCA_002255885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/885/GCA_002255885.1_ASM225588v1	-	-
Burkholderiales bacterium PBB1	2015563	PRJNA340070	340070	Proteobacteria	Betaproteobacteria	3.25457	65.6	-	NKIN01	20	2963	2895	8/16/17	8/16/17	Contig	CNRS-AMU	SAMN07280680	GCA_002255905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/905/GCA_002255905.1_ASM225590v1	-	-
Burkholderiales bacterium PBB6	2015568	PRJNA340070	340070	Proteobacteria	Betaproteobacteria	4.4135	66.6	-	NKIH01	35	4007	3920	8/16/17	8/16/17	Contig	CNRS-AMU	SAMN07280686	GCA_002255925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/925/GCA_002255925.1_ASM225592v1	-	-
Comamonadaceae bacterium PBBC2	2015581	PRJNA340070	340070	Proteobacteria	Betaproteobacteria	3.73353	60.1	-	NKIO01	144	3560	3456	8/16/17	8/16/17	Scaffold	CNRS-AMU	SAMN07280679	GCA_002255935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/935/GCA_002255935.1_ASM225593v1	-	-
Burkholderiales bacterium PBB2	2015564	PRJNA340070	340070	Proteobacteria	Betaproteobacteria	5.48166	66.5	-	NKIM01	90	4655	4553	8/16/17	8/16/17	Scaffold	CNRS-AMU	SAMN07280681	GCA_002255955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/955/GCA_002255955.1_ASM225595v1	-	-
Sphingomonadaceae bacterium PASS1	2015579	PRJNA340070	340070	Proteobacteria	Alphaproteobacteria	3.07288	55.5	-	NKIR01	30	2907	2834	8/16/17	8/16/17	Scaffold	CNRS-AMU	SAMN07280676	GCA_002255985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/985/GCA_002255985.1_ASM225598v1	-	-
Alphaproteobacteria bacterium PA4	2015572	PRJNA340070	340070	Proteobacteria	Alphaproteobacteria	2.99712	66.8	-	NKIQ01	53	2804	2726	8/16/17	8/16/17	Scaffold	CNRS-AMU	SAMN07280677	GCA_002256005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/005/GCA_002256005.1_ASM225600v1	-	-
Burkholderiales bacterium PBB4	2015566	PRJNA340070	340070	Proteobacteria	Betaproteobacteria	5.05008	59.1	-	NKIJ01	1872	5772	5338	8/16/17	8/16/17	Scaffold	CNRS-AMU	SAMN07280684	GCA_002256095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/095/GCA_002256095.1_ASM225609v1	-	-
Burkholderiales bacterium PBB3	2015565	PRJNA340070	340070	Proteobacteria	Betaproteobacteria	4.75542	59	-	NKIK01	118	4376	4262	8/16/17	8/16/17	Scaffold	CNRS-AMU	SAMN07280683	GCA_002256115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/115/GCA_002256115.1_ASM225611v1	-	-
Comamonadaceae bacterium PBBC1	2015580	PRJNA340070	340070	Proteobacteria	Betaproteobacteria	4.58952	58.8	-	NKIP01	60	4297	4163	8/16/17	8/16/17	Scaffold	CNRS-AMU	SAMN07280678	GCA_002256145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/145/GCA_002256145.1_ASM225614v1	-	-
Rhodobacteraceae bacterium PARR1	2015578	PRJNA340070	340070	Proteobacteria	Alphaproteobacteria	4.08547	63.3	-	NKIT01	285	4064	3888	8/16/17	8/16/17	Scaffold	CNRS-AMU	SAMN07280674	GCA_002256185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/185/GCA_002256185.1_ASM225618v1	-	-
Rhizobiales bacterium PAR1	2015577	PRJNA340070	340070	Proteobacteria	Alphaproteobacteria	4.20395	61.4	-	NKIW01	25	3923	3828	8/16/17	8/16/17	Scaffold	CNRS-AMU	SAMN07280671	GCA_002256205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/205/GCA_002256205.1_ASM225620v1	-	-
Burkholderiales bacterium PBB5	2015567	PRJNA340070	340070	Proteobacteria	Betaproteobacteria	6.82981	70.2	-	NKII01	4005	8704	8080	8/16/17	8/16/17	Scaffold	CNRS-AMU	SAMN07280685	GCA_002256085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/085/GCA_002256085.1_ASM225608v1	-	-
Alphaproteobacteria bacterium PA1	2015569	PRJNA340070	340070	Proteobacteria	Alphaproteobacteria	3.37677	56.2	-	NKJA01	22	3180	3119	8/16/17	8/16/17	Scaffold	CNRS-AMU	SAMN07280667	GCA_002256225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/225/GCA_002256225.1_ASM225622v1	-	-
Bradyrhizobiaceae bacterium PARB1	2015576	PRJNA340070	340070	Proteobacteria	Alphaproteobacteria	6.95348	62	-	NKIY01	32	6400	6219	8/16/17	8/16/17	Scaffold	CNRS-AMU	SAMN07280669	GCA_002256345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/345/GCA_002256345.1_ASM225634v1	-	-
Cytophagaceae bacterium BCCC1	2015573	PRJNA340070	340070	FCB group	Bacteroidetes/Chlorobi group	4.24407	36.3	-	NKJF01	164	3765	3697	8/16/17	8/16/17	Scaffold	CNRS-AMU	SAMN07280662	GCA_002256295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/295/GCA_002256295.1_ASM225629v1	-	-
Verrucomicrobiales bacterium VVV1	2015575	PRJNA340070	340070	PVC group	Verrucomicrobia	5.12126	61.1	-	NKJB01	2218	5626	5352	8/16/17	8/16/17	Scaffold	CNRS-AMU	SAMN07280666	GCA_002256265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/265/GCA_002256265.1_ASM225626v1	-	-
Bacteroidetes bacterium B1(2017)	2015582	PRJNA340070	340070	FCB group	Bacteroidetes/Chlorobi group	5.49842	36.2	-	NKJG01	225	4684	4600	8/16/17	8/16/17	Scaffold	CNRS-AMU	SAMN07280661	GCA_002256395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/395/GCA_002256395.1_ASM225639v1	-	-
Alphaproteobacteria bacterium PA2	2015570	PRJNA340070	340070	Proteobacteria	Alphaproteobacteria	3.47124	64	-	NKIZ01	1	3327	3259	8/16/17	8/16/17	Contig	CNRS-AMU	SAMN07280668	GCA_002256425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/425/GCA_002256425.1_ASM225642v1	-	-
Chitinophagaceae bacterium BSSC1	2015574	PRJNA340070	340070	FCB group	Bacteroidetes/Chlorobi group	4.33746	38.6	-	NKJC01	6	3660	3607	8/16/17	8/16/17	Contig	CNRS-AMU	SAMN07280665	GCA_002256435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/435/GCA_002256435.1_ASM225643v1	-	-
Alphaproteobacteria bacterium PA3	2015571	PRJNA340070	340070	Proteobacteria	Alphaproteobacteria	4.38696	57.3	-	NKIV01	1655	4977	4750	8/16/17	8/16/17	Scaffold	CNRS-AMU	SAMN07280672	GCA_002256275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/275/GCA_002256275.1_ASM225627v1	-	-
Methylococcaceae bacterium NSP1-1	1917480	PRJNA338276	338276	Proteobacteria	Gammaproteobacteria	1.66825	44.2	-	NQJG01	327	1869	1869	8/16/17	8/16/17	Scaffold	The Ohio State University	SAMN05908747	GCA_002256465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/465/GCA_002256465.1_ASM225646v1	-	-
Candidatus Marinimicrobia bacterium 408169	1958814	PRJNA374409	374409	FCB group	Candidatus Marinimicrobia	2.46822	37.8	-	NNSG01	48	-	-	8/16/17	8/16/17	Contig	Georgia Institute of Technology	SAMN07362179	GCA_002256485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/485/GCA_002256485.1_ASM225648v1	-	-
candidate division bacterium WOR-3 4484_18	2020626	PRJNA362212	362212	unclassified Bacteria	Bacteria candidate phyla	0.886404	44.8	-	NMUJ01	78	1003	943	8/16/17	8/16/17	Scaffold	The University of Texas at Austin	SAMN07350899	GCA_002256535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/535/GCA_002256535.1_ASM225653v1	-	-
Methylococcaceae bacterium NSP1-2	1917481	PRJNA338276	338276	Proteobacteria	Gammaproteobacteria	2.71986	42.8	-	NQJH01	421	2958	2958	8/16/17	8/16/17	Scaffold	The Ohio State University	SAMN05908748	GCA_002256685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/685/GCA_002256685.1_ASM225668v1	-	-
Methylococcaceae bacterium NSM2-1	1917482	PRJNA338276	338276	Proteobacteria	Gammaproteobacteria	1.90207	44.8	-	NQJI01	279	1957	1957	8/16/17	8/16/17	Scaffold	The Ohio State University	SAMN05908750	GCA_002256705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/705/GCA_002256705.1_ASM225670v1	-	-
Methylococcaceae bacterium NSO1	1917483	PRJNA338276	338276	Proteobacteria	Gammaproteobacteria	1.40542	43.9	-	NQJJ01	378	1725	1725	8/16/17	8/16/17	Scaffold	The Ohio State University	SAMN05908751	GCA_002256735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/735/GCA_002256735.1_ASM225673v1	-	-
Bacteroidetes bacterium 24-39-8	1970493	PRJNA379596	379596	FCB group	Bacteroidetes/Chlorobi group	3.39781	38.8	-	NCHJ01	212	2999	2913	8/16/17	8/16/17	Scaffold	None	SAMN06622271	GCA_002256765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/765/GCA_002256765.1_ASM225676v1	-	-
Hydrogenophilales bacterium 17-61-9	1970524	PRJNA379596	379596	Proteobacteria	Hydrogenophilalia	2.58491	61.1	-	NCIF01	273	2789	2652	8/16/17	8/16/17	Scaffold	None	SAMN06622249	GCA_002256785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/785/GCA_002256785.1_ASM225678v1	-	-
Hydrogenophilales bacterium 17-64-34	1970527	PRJNA379596	379596	Proteobacteria	Hydrogenophilalia	2.87984	64.3	-	NCIL01	42	2884	2786	8/16/17	8/16/17	Scaffold	None	SAMN06622243	GCA_002256885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/885/GCA_002256885.1_ASM225688v1	-	-
Sphingomonadales bacterium 39-62-4	1970599	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	1.74653	62.2	-	NCIU01	1043	2225	2026	8/16/17	8/16/17	Scaffold	None	SAMN06622234	GCA_002256875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/875/GCA_002256875.1_ASM225687v1	-	-
Thiotrichales bacterium 16-46-22	1970601	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	1.64159	46.1	-	NCGV01	173	1688	1605	8/16/17	8/16/17	Scaffold	None	SAMN06622285	GCA_002256965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/965/GCA_002256965.1_ASM225696v1	-	-
Hydrogenophilales bacterium 16-64-40	1970521	PRJNA379596	379596	Proteobacteria	Hydrogenophilalia	3.09896	63.7	-	NCGX01	68	3107	2984	8/16/17	8/16/17	Contig	None	SAMN06622283	GCA_002256995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/995/GCA_002256995.1_ASM225699v1	-	-
Sphingobacteriales bacterium 16-39-50	1970581	PRJNA379596	379596	FCB group	Bacteroidetes/Chlorobi group	4.09939	39.4	-	NCHA01	74	3519	3446	8/16/17	8/16/17	Contig	None	SAMN06622280	GCA_002257025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/025/GCA_002257025.1_ASM225702v1	-	-
Hydrogenophilales bacterium 16-61-112	1970519	PRJNA379596	379596	Proteobacteria	Hydrogenophilalia	2.90168	61.3	-	NCHD01	206	3024	2771	8/16/17	8/16/17	Scaffold	None	SAMN06622277	GCA_002257045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/045/GCA_002257045.1_ASM225704v1	-	-
Sphingobacteriales bacterium 24-40-4	1970583	PRJNA379596	379596	FCB group	Bacteroidetes/Chlorobi group	1.7924	39.9	-	NCHF01	844	2000	1914	8/16/17	8/16/17	Scaffold	None	SAMN06622275	GCA_002257055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/055/GCA_002257055.1_ASM225705v1	-	-
Sphingomonadales bacterium 24-56-14	1970588	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.35378	56.4	-	NCHO01	32	2297	2235	8/16/17	8/16/17	Contig	None	SAMN06622266	GCA_002257085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/085/GCA_002257085.1_ASM225708v1	-	-
Methylophilales bacterium 16-45-7	1970536	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	1.50132	43.8	-	NCGS01	652	1886	1720	8/16/17	8/16/17	Scaffold	None	SAMN06622288	GCA_002257155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/155/GCA_002257155.1_ASM225715v1	-	-
Gallionellales bacterium 24-53-125	1970510	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	3.27014	52.6	-	NCHU01	16	3158	3092	8/16/17	8/16/17	Scaffold	None	SAMN06622260	GCA_002257185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/185/GCA_002257185.1_ASM225718v1	-	-
Rhizobiales bacterium 24-66-13	1970548	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	5.06952	65.7	-	NCHM01	767	5142	4867	8/16/17	8/16/17	Scaffold	None	SAMN06622268	GCA_002257205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/205/GCA_002257205.1_ASM225720v1	-	-
Alphaproteobacteria bacterium 16-39-46	1970490	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	1.88578	39.3	-	NCGZ01	128	1733	1674	8/16/17	8/16/17	Contig	None	SAMN06622281	GCA_002257235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/235/GCA_002257235.1_ASM225723v1	-	-
Thiotrichales bacterium 24-47-4	1970603	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	0.680053	46.6	-	NCHG01	264	791	763	8/16/17	8/16/17	Scaffold	None	SAMN06622274	GCA_002257245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/245/GCA_002257245.1_ASM225724v1	-	-
Methylophilaceae bacterium 17-43-7	1970533	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	0.443023	42.8	-	NCIA01	173	527	481	8/16/17	8/16/17	Scaffold	None	SAMN06622254	GCA_002257285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/285/GCA_002257285.1_ASM225728v1	-	-
Sphingomonadales bacterium 17-56-6	1970587	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	1.49348	55.8	-	NCHY01	311	1708	1610	8/16/17	8/16/17	Scaffold	None	SAMN06622256	GCA_002257315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/315/GCA_002257315.1_ASM225731v1	-	-
Rhodobacterales bacterium 17-64-5	1970556	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.91125	64.3	-	NCHW01	1474	3825	3543	8/16/17	8/16/17	Scaffold	None	SAMN06622258	GCA_002257365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/365/GCA_002257365.1_ASM225736v1	-	-
Xanthomonadales bacterium 13-68-4	1970611	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	1.16307	68.2	-	NCKM01	746	1502	1367	8/16/17	8/16/17	Contig	None	SAMN06622190	GCA_002257385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/385/GCA_002257385.1_ASM225738v1	-	-
Thiotrichales bacterium 12-47-6	1970600	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	1.24995	46.6	-	NCCG01	209	1309	1219	8/16/17	8/16/17	Scaffold	None	SAMN06622404	GCA_002257445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/445/GCA_002257445.1_ASM225744v1	-	-
Halomonas ventosae	229007	PRJNA397791	397791	Proteobacteria	Gammaproteobacteria	5.37118	54.7357	chromosome:NZ_CP022737.1/CP022737.1; plasmid pNRS2HaP11:NZ_CP022738.1/CP022738.1; plasmid pNRS2HaP12:NZ_CP022739.1/CP022739.1; plasmid pNRS2HaP13:NZ_CP022740.1/CP022740.1	-	4	4958	4776	8/16/17	8/17/17	Chromosome	Forman Christian College	SAMN04419109	GCA_002257525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/525/GCA_002257525.1_ASM225752v1	-	NRS2HaP1
Rubricoccus marinus	716817	PRJNA355607	355607	Rhodothermaeota	Rhodothermia	4.43044	68.9	-	MQWB01	15	3746	3641	8/16/17	8/17/17	Scaffold	"Atmosphere and Ocean Research Institute, The University of Tokyo"	SAMN06091620	GCA_002257665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/665/GCA_002257665.1_ASM225766v1	-	SG-29
Bacillus swezeyi	1925020	PRJNA299292	299292	Terrabacteria group	Firmicutes	4.51972	44.3	-	MTJL01	76	4489	4189	1/23/17	9/18/17	Scaffold	NCAUR-ARS-USDA	SAMN06229978	GCA_001969555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/555/GCA_001969555.1_ASM196955v1	28809143	NRRL B-41282
Bordetella genomosp. 2	1983456	PRJNA385118	385118	Proteobacteria	Betaproteobacteria	5.02045	68.5	-	NEVT01	9	4789	4632	8/21/17	8/23/17	Contig	University of Michigan	SAMN06767130	GCA_002261345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/345/GCA_002261345.1_ASM226134v1	-	AU8256
Bordetella genomosp. 12	463035	PRJNA385118	385118	Proteobacteria	Betaproteobacteria	4.50721	64.7	-	NEVU01	3	4195	4079	8/21/17	8/23/17	Contig	University of Michigan	SAMN06767128	GCA_002261355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/355/GCA_002261355.1_ASM226135v1	-	AU6712
Actinobacillus seminis	722	PRJNA393051	393051	Proteobacteria	Gammaproteobacteria	2.36505	40.7	-	NLFK01	22	2277	2013	8/22/17	8/24/17	Contig	BUAP-UNAM	SAMN07314126	GCA_002263215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/215/GCA_002263215.1_ASM226321v1	-	ATCC 15768
Paenibacillus taichungensis	484184	PRJNA385758	385758	Terrabacteria group	Firmicutes	7.07743	46.2	-	NFUY01	218	6383	6208	8/22/17	8/24/17	Scaffold	VTT Technical Research Centre of Finland	SAMN06909663	GCA_002264305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/305/GCA_002264305.1_ASM226430v1	-	VTT E-133285
Planococcaceae bacterium VT-49	2020506	PRJNA393394	393394	Terrabacteria group	Firmicutes	2.78075	43.3	-	NOKQ01	393	2800	2675	8/22/17	8/24/17	Scaffold	Human Microbiology Institute	SAMN07331841	GCA_002265435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/435/GCA_002265435.1_ASM226543v1	-	VT-49
Polynucleobacter sphagniphilus	1743169	PRJNA295639	295639	Proteobacteria	Betaproteobacteria	2.04244	45.6	-	MPIY01	17	2113	2013	1/17/17	4/16/17	Contig	University of Innsbruck	SAMN06011405	GCA_001953355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/355/GCA_001953355.1_ASM195335v1	-	MWH-Weng1-1
Brucella abortus bv. 2 str. 86/8/59	520450	PRJNA243881	243881	Proteobacteria	Alphaproteobacteria	3.28613	57.2354	chromosome 1:NZ_CP007765.1/CP007765.1; chromosome 2:NZ_CP007764.1/CP007764.1	-	2	3377	3159	8/15/14	3/24/17	Complete Genome	Los Alamos National Laboratory	SAMN02770266	GCA_000740375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/375/GCA_000740375.1_ASM74037v1	-	86/8/59
Brucella abortus A13334	1104320	PRJNA74681	74681	Proteobacteria	Alphaproteobacteria	3.28603	57.2354	chromosome 1:NC_016795.1/CP003176.1; chromosome 2:NC_016777.1/CP003177.1	-	2	3386	3168	12/15/11	3/22/17	Complete Genome	Macrogen	SAMN02603577	GCA_000238175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/175/GCA_000238175.1_ASM23817v1	22965076	A13334
Brucella abortus S19	430066	PRJNA18999	18999	Proteobacteria	Alphaproteobacteria	3.28394	57.2354	chromosome 1:NC_010742.1/CP000887.1; chromosome 2:NC_010740.1/CP000888.1	-	2	3379	3151	5/22/08	3/22/17	Complete Genome	Virginia Bioinformatics Institute	SAMN02604294	GCA_000018725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/725/GCA_000018725.1_ASM1872v1	18478107	S19
Brucella abortus bv. 1 str. 9-941	262698	PRJNA9619	9619	Proteobacteria	Alphaproteobacteria	3.28645	57.2354	chromosome I:NC_006932.1/AE017223.1; chromosome II:NC_006933.1/AE017224.1	-	2	3376	3153	4/5/05	3/22/17	Complete Genome	University of Minnesota	SAMN02604220	GCA_000008145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/145/GCA_000008145.1_ASM814v1	15805518	9-941
Brucella abortus	235	PRJNA398311	398311	Proteobacteria	Alphaproteobacteria	3.27107	57.2353	chromosome 1:NZ_CP022877.1/CP022877.1; chromosome 2:NZ_CP022878.1/CP022878.1	-	2	3345	3115	8/22/17	8/24/17	Complete Genome	China Agricultural University	SAMN07508059	GCA_002262975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/975/GCA_002262975.1_ASM226297v1	-	BD
Brucella abortus	235	PRJNA398313	398313	Proteobacteria	Alphaproteobacteria	3.27087	57.2353	chromosome 1:NZ_CP022879.1/CP022879.1; chromosome 2:NZ_CP022880.1/CP022880.1	-	2	3341	3109	8/22/17	8/24/17	Complete Genome	China Agricultural University	SAMN07508100	GCA_002262995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/995/GCA_002262995.1_ASM226299v1	-	MC
Brucella abortus	235	PRJNA243017	243017	Proteobacteria	Alphaproteobacteria	3.27311	57.2353	chromosome 1:NZ_CP008774.1/CP008774.1; chromosome 2:NZ_CP008775.1/CP008775.1	-	2	3347	3121	6/30/15	3/26/17	Complete Genome	Shanghai JiaoTong University School of Medicine	SAMN02712083	GCA_001043295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/295/GCA_001043295.1_ASM104329v1	-	BAB8416
Anaeromicrobium sediminis	1478221	PRJNA387640	387640	Terrabacteria group	Firmicutes	4.71059	31.3	-	NIBG01	55	4359	4226	8/25/17	8/28/17	Scaffold	the third institute of oceanography	SAMN07184001	GCA_002270055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/270/055/GCA_002270055.1_ASM227005v1	-	DY2726D
Bacillus hisashii	996558	PRJNA390888	390888	Terrabacteria group	Firmicutes	3.83546	37.5	-	NJGA01	172	3676	3326	8/25/17	8/28/17	Contig	Agharkar Research Institute	SAMN07251982	GCA_002270345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/270/345/GCA_002270345.1_ASM227034v1	-	C4
Mesorhizobium sophorae	1300294	PRJNA394641	394641	Proteobacteria	Alphaproteobacteria	8.04911	62.2	-	NNRI01	24	7780	7205	8/25/17	8/28/17	Contig	Murdoch University	SAMN07357070	GCA_002270415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/270/415/GCA_002270415.1_ASM227041v1	-	ICMP 19535
Flectobacillus sp. BAB-3569	1509483	PRJNA361050	361050	FCB group	Bacteroidetes/Chlorobi group	6.63434	37.5	-	NJFZ01	191	5310	5016	8/25/17	8/28/17	Contig	Gujarat State Biotechnology Mission	SAMN07250986	GCA_002270355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/270/355/GCA_002270355.1_ASM227035v1	-	BAB-3569
Domibacillus mangrovi	1714354	PRJNA350786	350786	Terrabacteria group	Firmicutes	3.32425	40.6	-	MRWQ01	37	3350	3174	12/16/16	9/5/17	Contig	CSIR-Institute of Microbial Technology	SAMN05946062	GCA_001906925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/925/GCA_001906925.1_ASM190692v1	-	SAOS 44
Mycobacterium aquaticum	1927124	PRJNA354248	354248	Terrabacteria group	Actinobacteria	7.92759	66.5	-	MVHF01	111	7661	7377	4/11/17	9/5/17	Contig	San Raffaele Scientific Institute	SAMN06064228	GCA_002086485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/485/GCA_002086485.1_ASM208648v1	-	RW6
Oceanospirillum sanctuarii	1434821	PRJNA360364	360364	Proteobacteria	Gammaproteobacteria	4.05129	50.3	-	MTBA01	31	3490	3385	5/19/17	9/5/17	Contig	CSIR-IMTECH	SAMN06209377	GCA_002150805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/805/GCA_002150805.1_ASM215080v1	-	AK56
Rhodomicrobium sp. R_RK_3	2029567	PRJNA317721	317721	Proteobacteria	Alphaproteobacteria	5.7865	65	-	MWLK01	39	5189	5055	6/19/17	8/30/17	Scaffold	TU Berlin	SAMN06335526	GCA_002198715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/715/GCA_002198715.1_ASM219871v1	-	R_RK_3
Xanthomonas floridensis	1843580	PRJNA320158	320158	Proteobacteria	Gammaproteobacteria	5.25436	65.4	-	LXNG01	58	4583	4234	5/12/16	9/5/17	Contig	University of Exeter	SAMN04922374	GCA_001642575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/575/GCA_001642575.1_Xfloridensis_v1.0	28840805	WHRI 8848
Xanthomonas nasturtii	1843581	PRJNA320159	320159	Proteobacteria	Gammaproteobacteria	4.87368	64.5	-	LYMI01	89	4366	3886	6/10/16	9/5/17	Contig	University of Exeter	SAMN04922375	GCA_001660815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/815/GCA_001660815.1_Xnasturtii_v1.0	28840805	WHRI 8853
Domibacillus epiphyticus	1714355	PRJNA357181	357181	Terrabacteria group	Firmicutes	3.23707	41.5	-	MSFI01	44	3312	3162	1/30/17	9/5/17	Scaffold	CSIR-Institute of Microbial Technology	SAMN06134625	GCA_001975785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/785/GCA_001975785.1_ASM197578v1	-	SAB 38
Psychrobacter pasteurii	1945520	PRJEB19031	374004	Proteobacteria	Gammaproteobacteria	2.94164	42.6	-	FUGD01	229	2603	2344	2/10/17	9/5/17	Contig	INSTITUT PASTEUR	SAMEA79693918	GCA_900162815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/815/GCA_900162815.1_Psychrobacter_pasteurii_CIP110853_assembly	-	-
Psychrobacter piechaudii	1945521	PRJEB19031	374004	Proteobacteria	Gammaproteobacteria	2.8209	42.3	-	FUGE01	300	2554	2200	2/10/17	9/5/17	Scaffold	INSTITUT PASTEUR	SAMEA79694668	GCA_900162825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/825/GCA_900162825.1_Psychrobacter_piechaudii_CIP110854_assembly	-	-
Planktotalea arctica	1481893	PRJNA324069	324069	Proteobacteria	Alphaproteobacteria	3.78642	57.1	-	MUHR01	49	3765	3631	4/21/17	9/5/17	Scaffold	Nakdonggang National Institute of Biological Resources	SAMN05194549	GCA_002105285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/285/GCA_002105285.1_ASM210528v1	-	IMCC9565
Jiulongibacter sediminis	1605367	PRJNA290980	290980	FCB group	Bacteroidetes/Chlorobi group	4.47404	41.6	-	LGTQ01	30	3874	3813	10/5/15	9/5/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN03940006	GCA_001306455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/455/GCA_001306455.1_ASM130645v1	-	JN14-9
Brucella abortus bv. 6 str. 870	520454	PRJNA244260	244260	Proteobacteria	Alphaproteobacteria	3.28115	57.2353	chromosome 1:NZ_CP007709.1/CP007709.1; chromosome 2:NZ_CP007710.1/CP007710.1	-	2	3368	3142	8/15/14	3/24/17	Complete Genome	Los Alamos National Laboratory	SAMN02770262	GCA_000740215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/215/GCA_000740215.1_ASM74021v1	25237024	870
Terribacillus sp. 7520-G	2025389	PRJNA395369	395369	Terrabacteria group	Firmicutes	3.32245	46.5	-	NQFP01	83	3392	3320	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372686	GCA_002271665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/665/GCA_002271665.1_assembly-7520-G_v1	-	7520-G
Paenibacillus campinasensis	66347	PRJNA395369	395369	Terrabacteria group	Firmicutes	5.62432	52	-	NPBY01	170	5132	4976	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372699	GCA_002272015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/015/GCA_002272015.1_assembly-7537-G1_v1	-	7537-G1
Brucella abortus 2308	359391	PRJNA16203	16203	Proteobacteria	Alphaproteobacteria	3.27831	57.2353	chromosome I:NC_007618.1/AM040264.1; chromosome II:NC_007624.1/AM040265.1	-	2	3375	3153	11/22/05	3/22/17	Complete Genome	Oak Ridge National Laboratory	SAMEA3138256	GCA_000054005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/054/005/GCA_000054005.1_ASM5400v1	16299333	2308
Staphylococcus saccharolyticus	33028	PRJNA375758	375758	Terrabacteria group	Firmicutes	2.44417	32.8	-	NDFI01	85	2387	2234	8/29/17	8/30/17	Contig	SysMilk	SAMN06718504	GCA_002276515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/515/GCA_002276515.1_ASM227651v1	-	KR
Rhizobiales bacterium 12-66-7	1970545	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	1.93855	65.9	-	NCCN01	240	2023	1781	8/16/17	8/16/17	Scaffold	None	SAMN06622397	GCA_002279695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/695/GCA_002279695.1_ASM227969v1	-	-
Rhodobacterales bacterium 12-64-8	1970554	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	1.41048	64.5	-	NCCQ01	151	1495	1404	8/16/17	8/16/17	Scaffold	None	SAMN06622394	GCA_002279755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/755/GCA_002279755.1_ASM227975v1	-	-
Verrucomicrobia bacterium 12-59-8	1970608	PRJNA379596	379596	PVC group	Verrucomicrobia	7.16785	59.4	-	NCCR01	387	6277	5972	8/16/17	8/16/17	Scaffold	None	SAMN06622393	GCA_002279765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/765/GCA_002279765.1_ASM227976v1	-	-
Hydrogenophilales bacterium 12-61-10	1970515	PRJNA379596	379596	Proteobacteria	Hydrogenophilalia	3.02374	61.4	-	NCCT01	160	3151	2951	8/16/17	8/16/17	Scaffold	None	SAMN06622391	GCA_002279795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/795/GCA_002279795.1_ASM227979v1	-	-
Sphingomonadales bacterium 12-68-11	1970586	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.86526	67.9	-	NCCV01	9	2825	2732	8/16/17	8/16/17	Scaffold	None	SAMN06622389	GCA_002279825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/825/GCA_002279825.1_ASM227982v1	-	-
Rhizobiales bacterium 12-68-15	1970546	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	3.74736	67.5	-	NCCY01	414	3749	3481	8/16/17	8/16/17	Scaffold	None	SAMN06622386	GCA_002279855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/855/GCA_002279855.1_ASM227985v1	-	-
Hydrogenophilales bacterium 12-64-13	1970517	PRJNA379596	379596	Proteobacteria	Hydrogenophilalia	2.88301	64.3	-	NCCW01	26	2870	2776	8/16/17	8/16/17	Scaffold	None	SAMN06622388	GCA_002279885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/885/GCA_002279885.1_ASM227988v1	-	-
Rhodobacterales bacterium 12-65-15	1970555	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.82324	65.3	-	NCCX01	588	3225	2853	8/16/17	8/16/17	Scaffold	None	SAMN06622387	GCA_002279895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/895/GCA_002279895.1_ASM227989v1	-	-
Candidatus Saccharibacteria bacterium 32-45-3	1970477	PRJNA379596	379596	unclassified Bacteria	Bacteria candidate phyla	0.297062	45.5	-	NCDA01	195	454	428	8/16/17	8/16/17	Scaffold	None	SAMN06622384	GCA_002279965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/965/GCA_002279965.1_ASM227996v1	-	-
Sphingobacteriia bacterium 32-37-4	1970574	PRJNA379596	379596	FCB group	Bacteroidetes/Chlorobi group	1.50644	37.1	-	NCDB01	736	1804	1672	8/16/17	8/16/17	Scaffold	None	SAMN06622383	GCA_002279945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/945/GCA_002279945.1_ASM227994v1	-	-
Pseudomonadales bacterium 32-42-5	1970543	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	1.41991	42.4	-	NCDE01	697	1723	1513	8/16/17	8/16/17	Scaffold	None	SAMN06622380	GCA_002280025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/025/GCA_002280025.1_ASM228002v1	-	-
Pseudomonadales bacterium 32-61-5	1970544	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	2.32197	61	-	NCDF01	1213	2902	2550	8/16/17	8/16/17	Scaffold	None	SAMN06622379	GCA_002280035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/035/GCA_002280035.1_ASM228003v1	-	-
Verrucomicrobiales bacterium 32-60-5	1970610	PRJNA379596	379596	PVC group	Verrucomicrobia	0.315287	59.8	-	NCDH01	176	354	326	8/16/17	8/16/17	Scaffold	None	SAMN06622377	GCA_002280095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/095/GCA_002280095.1_ASM228009v1	-	-
Candidatus Saccharibacteria bacterium 32-49-10	1970478	PRJNA379596	379596	unclassified Bacteria	Bacteria candidate phyla	0.804529	49.5	-	NCDL01	443	1061	1009	8/16/17	8/16/17	Scaffold	None	SAMN06622373	GCA_002280165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/165/GCA_002280165.1_ASM228016v1	-	-
Caulobacterales bacterium 32-67-6	1970502	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.87236	67.4	-	NCDP01	736	3337	3020	8/16/17	8/16/17	Scaffold	None	SAMN06622369	GCA_002280225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/225/GCA_002280225.1_ASM228022v1	-	-
Rhizobiales bacterium 32-66-8	1970550	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	4.26267	66.1	-	NCDN01	1396	4775	4351	8/16/17	8/16/17	Scaffold	None	SAMN06622371	GCA_002280205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/205/GCA_002280205.1_ASM228020v1	-	-
Rhodobacterales bacterium 32-66-7	1970558	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.57528	65.7	-	NCDS01	219	2672	2436	8/16/17	8/16/17	Scaffold	None	SAMN06622366	GCA_002280315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/315/GCA_002280315.1_ASM228031v1	-	-
Sphingomonadales bacterium 32-68-7	1970596	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.66478	67.8	-	NCDU01	107	2684	2493	8/16/17	8/16/17	Scaffold	None	SAMN06622364	GCA_002280335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/335/GCA_002280335.1_ASM228033v1	-	-
Sphingomonadales bacterium 32-67-7	1970595	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	0.678204	65.9	-	NCDV01	125	751	687	8/16/17	8/16/17	Scaffold	None	SAMN06622363	GCA_002280365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/365/GCA_002280365.1_ASM228036v1	-	-
Rhodobacterales bacterium 32-66-9	1970559	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.91542	66.4	-	NCDY01	177	2964	2742	8/16/17	8/16/17	Scaffold	None	SAMN06622360	GCA_002280405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/405/GCA_002280405.1_ASM228040v1	-	-
Thiotrichales bacterium 32-46-8	1970604	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	1.78058	46.3	-	NCDX01	185	1830	1730	8/16/17	8/16/17	Scaffold	None	SAMN06622361	GCA_002280415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/415/GCA_002280415.1_ASM228041v1	-	-
Hydrogenophilales bacterium 32-62-9	1970531	PRJNA379596	379596	Proteobacteria	Hydrogenophilalia	3.05727	61.6	-	NCDZ01	246	3190	2940	8/16/17	8/16/17	Scaffold	None	SAMN06622359	GCA_002280425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/425/GCA_002280425.1_ASM228042v1	-	-
Flavobacteriales bacterium 32-35-8	1970509	PRJNA379596	379596	FCB group	Bacteroidetes/Chlorobi group	2.53837	35.1	-	NCDW01	320	2408	2278	8/16/17	8/16/17	Scaffold	None	SAMN06622362	GCA_002280395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/395/GCA_002280395.1_ASM228039v1	-	-
Caulobacterales bacterium 32-69-10	1970503	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.83906	69	-	NCED01	154	2875	2702	8/16/17	8/16/17	Scaffold	None	SAMN06622355	GCA_002280485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/485/GCA_002280485.1_ASM228048v1	-	-
Rhodobacterales bacterium 32-67-9	1970560	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	3.71833	66.4	-	NCEA01	60	3682	3534	8/16/17	8/16/17	Scaffold	None	SAMN06622358	GCA_002280515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/515/GCA_002280515.1_ASM228051v1	-	-
Candidatus Saccharibacteria bacterium 32-50-10	1970480	PRJNA379596	379596	unclassified Bacteria	Bacteria candidate phyla	0.929515	50.3	-	NCEC01	101	1083	1007	8/16/17	8/16/17	Scaffold	None	SAMN06622356	GCA_002280525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/525/GCA_002280525.1_ASM228052v1	-	-
Comamonadaceae bacterium 32-67-11	1970505	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	2.18638	66.8	-	NCEG01	276	2214	2016	8/16/17	8/16/17	Scaffold	None	SAMN06622352	GCA_002280595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/595/GCA_002280595.1_ASM228059v1	-	-
Candidatus Saccharibacteria bacterium 32-49-12	1970479	PRJNA379596	379596	unclassified Bacteria	Bacteria candidate phyla	1.10304	48.8	-	NCEI01	66	1244	1164	8/16/17	8/16/17	Scaffold	None	SAMN06622350	GCA_002280635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/635/GCA_002280635.1_ASM228063v1	-	-
Candidatus Saccharibacteria bacterium 32-50-13	1970481	PRJNA379596	379596	unclassified Bacteria	Bacteria candidate phyla	0.81526	49.6	-	NCEK01	52	922	867	8/16/17	8/16/17	Scaffold	None	SAMN06622348	GCA_002280625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/625/GCA_002280625.1_ASM228062v1	-	-
Micrococcales bacterium 32-70-13	1970540	PRJNA379596	379596	Terrabacteria group	Actinobacteria	1.80932	70.4	-	NCEJ01	261	1953	1777	8/16/17	8/16/17	Scaffold	None	SAMN06622349	GCA_002280615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/615/GCA_002280615.1_ASM228061v1	-	-
Sphingomonadales bacterium 32-64-17	1970592	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	3.28894	64.2	-	NCEO01	116	3237	3094	8/16/17	8/16/17	Scaffold	None	SAMN06622344	GCA_002280685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/685/GCA_002280685.1_ASM228068v1	-	-
Rhodobacterales bacterium 32-64-14	1970557	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	0.295135	63.8	-	NCEL01	59	307	278	8/16/17	8/16/17	Contig	None	SAMN06622347	GCA_002280705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/705/GCA_002280705.1_ASM228070v1	-	-
Alphaproteobacteria bacterium 32-64-14	1970492	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	3.86128	64.4	-	NCEM01	98	3844	3720	8/16/17	8/16/17	Scaffold	None	SAMN06622346	GCA_002280725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/725/GCA_002280725.1_ASM228072v1	-	-
Sphingomonadales bacterium 32-64-22	1970593	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	0.845136	64.3	-	NCEP01	174	910	843	8/16/17	8/16/17	Scaffold	None	SAMN06622343	GCA_002280755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/755/GCA_002280755.1_ASM228075v1	-	-
Flavobacteriales bacterium 32-34-25	1970508	PRJNA379596	379596	FCB group	Bacteroidetes/Chlorobi group	4.04103	33.7	-	NCET01	593	3912	3569	8/16/17	8/16/17	Scaffold	None	SAMN06622339	GCA_002280815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/815/GCA_002280815.1_ASM228081v1	-	-
Sphingomonadales bacterium 32-65-25	1970594	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	3.0404	64.9	-	NCEU01	12	2877	2781	8/16/17	8/16/17	Scaffold	None	SAMN06622338	GCA_002280855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/855/GCA_002280855.1_ASM228085v1	-	-
Sphingobacteriia bacterium 35-40-5	1970579	PRJNA379596	379596	FCB group	Bacteroidetes/Chlorobi group	3.00306	40	-	NCFA01	1475	2973	2865	8/16/17	8/16/17	Scaffold	None	SAMN06622332	GCA_002280935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/935/GCA_002280935.1_ASM228093v1	-	-
Mehylophilales bacterium 35-46-6	1970535	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	1.59177	45.7	-	NCFE01	480	1738	1660	8/16/17	8/16/17	Scaffold	None	SAMN06622328	GCA_002281025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/025/GCA_002281025.1_ASM228102v1	-	-
Thiotrichales bacterium 35-46-9	1970606	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	1.82763	46.3	-	NCFI01	144	1810	1752	8/16/17	8/16/17	Scaffold	None	SAMN06622324	GCA_002281095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/095/GCA_002281095.1_ASM228109v1	-	-
Rhizobiales bacterium 35-68-8	1970552	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	3.26635	67.6	-	NCFG01	485	3322	3156	8/16/17	8/16/17	Scaffold	None	SAMN06622326	GCA_002281075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/075/GCA_002281075.1_ASM228107v1	-	-
Sphingobacteriia bacterium 35-40-8	1970576	PRJNA379596	379596	FCB group	Bacteroidetes/Chlorobi group	2.79935	39.6	-	NCFH01	517	2615	2550	8/16/17	8/16/17	Scaffold	None	SAMN06622325	GCA_002281085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/085/GCA_002281085.1_ASM228108v1	-	-
Sphingobacteriia bacterium 35-36-14	1970575	PRJNA379596	379596	FCB group	Bacteroidetes/Chlorobi group	2.74648	36.4	-	NCFK01	290	2594	2515	8/16/17	8/16/17	Scaffold	None	SAMN06622322	GCA_002281185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/185/GCA_002281185.1_ASM228118v1	-	-
Sphingomonadales bacterium 35-56-22	1970597	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.3671	56.4	-	NCFO01	35	2312	2250	8/16/17	8/16/17	Scaffold	None	SAMN06622318	GCA_002281235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/235/GCA_002281235.1_ASM228123v1	-	-
Burkholderiales bacterium 35-55-47	1970499	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	2.57173	54.5	-	NCFR01	16	2591	2533	8/16/17	8/16/17	Contig	None	SAMN06622315	GCA_002281275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/275/GCA_002281275.1_ASM228127v1	-	-
Rhodospirillales bacterium 35-66-84	1970569	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	6.17383	66.2	-	NCFT01	66	6048	5898	8/16/17	8/16/17	Scaffold	None	SAMN06622313	GCA_002281325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/325/GCA_002281325.1_ASM228132v1	-	-
Rhizobiales bacterium 35-66-30	1970551	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	4.43869	65.9	-	NCFP01	1578	4992	4599	8/16/17	8/16/17	Scaffold	None	SAMN06622317	GCA_002281255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/255/GCA_002281255.1_ASM228125v1	-	-
Gallionellales bacterium 35-53-114	1970511	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	3.28837	52.5	-	NCFU01	23	3197	3116	8/16/17	8/16/17	Scaffold	None	SAMN06622312	GCA_002281365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/365/GCA_002281365.1_ASM228136v1	-	-
Burkholderiales bacterium 28-67-8	1970497	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	2.6268	66.6	-	NCFZ01	248	2582	2463	8/16/17	8/16/17	Scaffold	None	SAMN06622307	GCA_002281415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/415/GCA_002281415.1_ASM228141v1	-	-
Hydrogenophilales bacterium 28-61-11	1970529	PRJNA379596	379596	Proteobacteria	Hydrogenophilalia	2.88506	61.5	-	NCGA01	304	3015	2854	8/16/17	8/16/17	Scaffold	None	SAMN06622306	GCA_002281435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/435/GCA_002281435.1_ASM228143v1	-	-
Methylophilales bacterium 28-44-11	1970538	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	2.24181	43.6	-	NCGC01	234	2317	2215	8/16/17	8/16/17	Scaffold	None	SAMN06622304	GCA_002281475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/475/GCA_002281475.1_ASM228147v1	-	-
Hydrogenophilales bacterium 28-61-23	1970530	PRJNA379596	379596	Proteobacteria	Hydrogenophilalia	3.51366	60.9	-	NCGJ01	30	3329	3218	8/16/17	8/16/17	Contig	None	SAMN06622297	GCA_002281555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/555/GCA_002281555.1_ASM228155v1	-	-
Sphingobacteriia bacterium 28-36-52	1970573	PRJNA379596	379596	FCB group	Bacteroidetes/Chlorobi group	3.17835	36.1	-	NCGN01	24	2864	2796	8/16/17	8/16/17	Scaffold	None	SAMN06622293	GCA_002281575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/575/GCA_002281575.1_ASM228157v1	-	-
Sphingomonadales bacterium 28-56-43	1970590	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.40171	56.5	-	NCGM01	47	2337	2270	8/16/17	8/16/17	Contig	None	SAMN06622294	GCA_002281585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/585/GCA_002281585.1_ASM228158v1	-	-
Sphingomonadales bacterium 28-64-96	1970591	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	3.36558	64.6	-	NCGP01	10	3156	3050	8/16/17	8/16/17	Contig	None	SAMN06622291	GCA_002281615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/615/GCA_002281615.1_ASM228161v1	-	-
Methylophilales bacterium 16-45-9	1970537	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	1.04685	45	-	NCGQ01	588	1365	1224	8/16/17	8/16/17	Scaffold	None	SAMN06622290	GCA_002281625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/625/GCA_002281625.1_ASM228162v1	-	-
Hydrogenophilales bacterium 16-62-9	1970520	PRJNA379596	379596	Proteobacteria	Hydrogenophilalia	0.82635	62	-	NCGR01	543	1207	1087	8/16/17	8/16/17	Scaffold	None	SAMN06622289	GCA_002281655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/655/GCA_002281655.1_ASM228165v1	-	-
Campylobacterales bacterium 16-40-21	1970501	PRJNA379596	379596	Proteobacteria	delta/epsilon subdivisions	2.25714	40.1	-	NCGU01	111	2445	2363	8/16/17	8/16/17	Scaffold	None	SAMN06622286	GCA_002281685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/685/GCA_002281685.1_ASM228168v1	-	-
Gammaproteobacteria bacterium 28-57-27	1970513	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	2.3073	56.8	-	NCGK01	62	2234	2162	8/16/17	8/16/17	Scaffold	None	SAMN06622296	GCA_002281735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/735/GCA_002281735.1_ASM228173v1	-	-
Hydrogenophilales bacterium 16-64-46	1970522	PRJNA379596	379596	Proteobacteria	Hydrogenophilalia	2.86557	64.3	-	NCGY01	40	2864	2778	8/16/17	8/16/17	Scaffold	None	SAMN06622282	GCA_002281775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/775/GCA_002281775.1_ASM228177v1	-	-
Rhodospirillales bacterium 24-66-33	1970567	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	6.12254	66.3	-	NCHQ01	54	6004	5863	8/16/17	8/16/17	Scaffold	None	SAMN06622264	GCA_002281855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/855/GCA_002281855.1_ASM228185v1	-	-
Sphingobacteriia bacterium 24-36-13	1970572	PRJNA379596	379596	FCB group	Bacteroidetes/Chlorobi group	3.06919	36.2	-	NCHN01	89	2835	2768	8/16/17	8/16/17	Scaffold	None	SAMN06622267	GCA_002281875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/875/GCA_002281875.1_ASM228187v1	-	-
Burkholderiales bacterium 24-55-52	1970496	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	2.62719	54.6	-	NCHS01	27	2669	2614	8/16/17	8/16/17	Scaffold	None	SAMN06622262	GCA_002281915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/915/GCA_002281915.1_ASM228191v1	-	-
Rhizobiales bacterium 17-65-6	1970547	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	3.98194	67.1	-	NCHZ01	636	4206	3900	8/16/17	8/16/17	Scaffold	None	SAMN06622255	GCA_002281955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/955/GCA_002281955.1_ASM228195v1	-	-
Hydrogenophilales bacterium 17-64-11	1970526	PRJNA379596	379596	Proteobacteria	Hydrogenophilalia	3.05095	64.5	-	NCIH01	148	3118	2991	8/16/17	8/16/17	Scaffold	None	SAMN06622247	GCA_002281975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/975/GCA_002281975.1_ASM228197v1	-	-
Sphingobacteriales bacterium 17-39-43	1970582	PRJNA379596	379596	FCB group	Bacteroidetes/Chlorobi group	4.10117	39.4	-	NCIM01	86	3528	3453	8/16/17	8/16/17	Scaffold	None	SAMN06622242	GCA_002282055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/055/GCA_002282055.1_ASM228205v1	-	-
Thiotrichales bacterium 17-46-47	1970602	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	1.41535	45.9	-	NCIN01	232	1492	1389	8/16/17	8/16/17	Scaffold	None	SAMN06622241	GCA_002282065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/065/GCA_002282065.1_ASM228206v1	-	-
Alphaproteobacteria bacterium 17-39-52	1970491	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	1.93565	39.3	-	NCIO01	127	1769	1702	8/16/17	8/16/17	Scaffold	None	SAMN06622240	GCA_002282095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/095/GCA_002282095.1_ASM228209v1	-	-
Hydrogenophilales bacterium 17-64-65	1970528	PRJNA379596	379596	Proteobacteria	Hydrogenophilalia	3.14466	63.7	-	NCIQ01	69	3151	2999	8/16/17	8/16/17	Scaffold	None	SAMN06622238	GCA_002282115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/115/GCA_002282115.1_ASM228211v1	-	-
Methylophilaceae bacterium 17-44-8	1970534	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	1.96534	43.5	-	NCID01	158	2015	1927	8/16/17	8/16/17	Scaffold	None	SAMN06622251	GCA_002282135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/135/GCA_002282135.1_ASM228213v1	-	-
Hydrogenophilales bacterium 17-62-8	1970525	PRJNA379596	379596	Proteobacteria	Hydrogenophilalia	1.07665	61.9	-	NCIE01	514	1374	1295	8/16/17	8/16/17	Scaffold	None	SAMN06622250	GCA_002282155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/155/GCA_002282155.1_ASM228215v1	-	-
Sphingobacteriales bacterium 39-40-5	1970584	PRJNA379596	379596	FCB group	Bacteroidetes/Chlorobi group	1.80448	40.3	-	NCIX01	679	1837	1753	8/16/17	8/16/17	Scaffold	None	SAMN06622231	GCA_002282195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/195/GCA_002282195.1_ASM228219v1	-	-
Thiotrichales bacterium 39-47-5	1970607	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	0.942856	46.8	-	NCIY01	256	1027	981	8/16/17	8/16/17	Scaffold	None	SAMN06622230	GCA_002282215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/215/GCA_002282215.1_ASM228221v1	-	-
Methylophilales bacterium 39-45-7	1970539	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	1.53931	45.3	-	NCIZ01	165	1555	1495	8/16/17	8/16/17	Scaffold	None	SAMN06622229	GCA_002282245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/245/GCA_002282245.1_ASM228224v1	-	-
Hydrogenophilales bacterium 17-61-76	1970523	PRJNA379596	379596	Proteobacteria	Hydrogenophilalia	2.81562	61.3	-	NCIR01	242	2976	2583	8/16/17	8/16/17	Scaffold	None	SAMN06622237	GCA_002282235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/235/GCA_002282235.1_ASM228223v1	-	-
Sphingobacteriia bacterium 39-39-8	1970578	PRJNA379596	379596	FCB group	Bacteroidetes/Chlorobi group	3.04766	39	-	NCJA01	288	2722	2645	8/16/17	8/16/17	Scaffold	None	SAMN06622228	GCA_002282285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/285/GCA_002282285.1_ASM228228v1	-	-
Sphingomonadales bacterium 39-57-19	1970598	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.31096	56.4	-	NCJG01	20	2258	2193	8/16/17	8/16/17	Contig	None	SAMN06622222	GCA_002282385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/385/GCA_002282385.1_ASM228238v1	-	-
Rhizobiales bacterium 39-66-18	1970553	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	5.84344	65.8	-	NCJF01	1067	6039	5648	8/16/17	8/16/17	Scaffold	None	SAMN06622223	GCA_002282365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/365/GCA_002282365.1_ASM228236v1	-	-
Burkholderiales bacterium 39-55-53	1970500	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	2.56325	54.5	-	NCJK01	14	2582	2525	8/16/17	8/16/17	Contig	None	SAMN06622218	GCA_002282445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/445/GCA_002282445.1_ASM228244v1	-	-
Rhodospirillales bacterium 39-66-50	1970570	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	6.13774	66.2	-	NCJJ01	55	5998	5857	8/16/17	8/16/17	Scaffold	None	SAMN06622219	GCA_002282435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/435/GCA_002282435.1_ASM228243v1	-	-
Burkholderiales bacterium 34-67-9	1970498	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	1.31696	66.9	-	NCJQ01	397	1477	1356	8/16/17	8/16/17	Scaffold	None	SAMN06622212	GCA_002282515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/515/GCA_002282515.1_ASM228251v1	-	-
Rhodobacterales bacterium 34-62-10	1970561	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.66263	62.2	-	NCJR01	542	2915	2737	8/16/17	8/16/17	Scaffold	None	SAMN06622211	GCA_002282555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/555/GCA_002282555.1_ASM228255v1	-	-
Thiotrichales bacterium 34-46-19	1970605	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	1.54863	46.1	-	NCJU01	217	1623	1533	8/16/17	8/16/17	Scaffold	None	SAMN06622208	GCA_002282575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/575/GCA_002282575.1_ASM228257v1	-	-
Xanthomonadales bacterium 14-68-21	1970612	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	4.65905	68	-	NCKH01	51	4212	4114	8/16/17	8/16/17	Contig	None	SAMN06622195	GCA_002282695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/695/GCA_002282695.1_ASM228269v1	-	-
Paraferrimonas sp. CFD7-4-2	2013867	PRJNA399243	399243	Proteobacteria	Gammaproteobacteria	3.25303	47	-	NRRC01	18	2993	2895	8/31/17	9/2/17	Contig	"Third Institute of Oceanography, SOA"	SAMN07528625	GCA_002282865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/865/GCA_002282865.1_ASM228286v1	-	CFD7-4-2
Bacillus haynesii	1925021	PRJNA299292	299292	Terrabacteria group	Firmicutes	4.37852	45.7	-	MRBL01	76	4487	4204	1/23/17	9/18/17	Scaffold	NCAUR-ARS-USDA	SAMN06102002	GCA_001969855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/855/GCA_001969855.1_ASM196985v1	28809143	NRRL B-41327
Candidatus Brocadia sapporoensis	392547	PRJNA344009	344009	PVC group	Planctomycetes	2.93461	42.7	-	MJUW02	123	2593	2465	10/6/16	3/25/17	Scaffold	KAUST	SAMN05817826	GCA_001753675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/675/GCA_001753675.2_ASM175367v2	-	40
Sporomusa silvacetica DSM 10669	1123289	PRJNA310713	310713	Terrabacteria group	Firmicutes	5.92911	43	-	LSLK01	165	5698	5355	8/17/17	8/19/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04455153	GCA_002257705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/705/GCA_002257705.1_ASM225770v1	-	DSM 10669
Bacillus wudalianchiensis	1743143	PRJNA321786	321786	Terrabacteria group	Firmicutes	4.4271	41.2	-	MAYT01	32	4339	4185	7/14/16	8/30/17	Contig	Fujian Academy of Agricultural Sciences	SAMN05003832	GCA_001685015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/015/GCA_001685015.1_ASM168501v1	-	FJAT-27215
Mycobacterium talmoniae	1858794	PRJNA338014	338014	Terrabacteria group	Actinobacteria	5.62217	68.8	-	MLQM01	381	5584	5090	10/26/16	8/30/17	Scaffold	UW	SAMN05909063	GCA_001854525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/525/GCA_001854525.1_ASM185452v1	-	NE-TNMC-100812
Paenibacillus ihbetae	1870820	PRJNA327492	327492	Terrabacteria group	Firmicutes	6.543	52.2	-	MRVI01	6	5864	5597	2/13/17	4/17/17	Contig	CSIR-Institute of Himalayan Bioresource Technology	SAMN05335612	GCA_001996445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/445/GCA_001996445.1_ASM199644v1	-	IHBB 9951
Henriciella pelagia	1977912	PRJNA381091	381091	Proteobacteria	Alphaproteobacteria	3.44402	59.9	-	NCSU01	16	3376	3280	4/13/17	8/30/17	Contig	"Second Institute of Oceanography, State Oceanic Administration"	SAMN06670196	GCA_002088945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/945/GCA_002088945.1_ASM208894v1	-	LA220
Marinobacter vinifirmus	355591	PRJNA384071	384071	Proteobacteria	Gammaproteobacteria	3.83658	58	-	NEFY01	60	3586	3435	8/18/17	8/21/17	Contig	University of Houston	SAMN06827974	GCA_002258215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/215/GCA_002258215.1_ASM225821v1	-	FB1
Rickettsia endosymbiont of Culicoides newsteadi	1961830	PRJNA376033	376033	Proteobacteria	Alphaproteobacteria	1.45618	33	-	MWZE01	193	1428	1261	8/18/17	8/21/17	Scaffold	University of Liverpool	SAMN06349452	GCA_002259525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/525/GCA_002259525.1_ASM225952v1	28805302	RiCNE
Aeriscardovia aeriphila	218139	PRJNA376375	376375	Terrabacteria group	Actinobacteria	1.6311	54	-	MWWU01	12	1325	1230	8/18/17	8/21/17	Contig	University of Parma	SAMN06341152	GCA_002259595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/595/GCA_002259595.1_ASM225959v1	28764658	LMG 21773
Bombiscardovia coagulans	686666	PRJNA376375	376375	Terrabacteria group	Actinobacteria	1.74133	47.3	-	MWWS01	15	1461	1380	8/18/17	8/21/17	Contig	University of Parma	SAMN06341154	GCA_002259585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/585/GCA_002259585.1_ASM225958v1	28764658	DSM 22924
Pseudoscardovia radai	987066	PRJNA376375	376375	Terrabacteria group	Actinobacteria	2.43677	65	-	MWWR01	35	1802	1692	8/18/17	8/21/17	Contig	University of Parma	SAMN06341155	GCA_002259605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/605/GCA_002259605.1_ASM225960v1	28764658	DSM 24742
Bifidobacterium tissieri	1630162	PRJNA376375	376375	Terrabacteria group	Actinobacteria	2.87348	61.1	-	MWWV01	38	2313	2163	8/18/17	8/21/17	Contig	University of Parma	SAMN06341151	GCA_002259645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/645/GCA_002259645.1_ASM225964v1	28764658	DSM 100201
Bifidobacterium eulemuris	1765219	PRJNA376375	376375	Terrabacteria group	Actinobacteria	2.91339	62.2	-	MWWZ01	34	2372	2215	8/18/17	8/21/17	Contig	University of Parma	SAMN06341147	GCA_002259685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/685/GCA_002259685.1_ASM225968v1	28764658	DSM 100216
Pseudoscardovia suis	987063	PRJNA376375	376375	Terrabacteria group	Actinobacteria	2.27062	60.6	-	MWWQ01	26	1744	1632	8/18/17	8/21/17	Contig	University of Parma	SAMN06341156	GCA_002259715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/715/GCA_002259715.1_ASM225971v1	28764658	DSM 24744
Bifidobacterium myosotis	1630166	PRJNA376375	376375	Terrabacteria group	Actinobacteria	2.9442	62.6	-	MWWW01	58	2249	2008	8/18/17	8/21/17	Contig	University of Parma	SAMN06341150	GCA_002259745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/745/GCA_002259745.1_ASM225974v1	28764658	DSM 100196
Bifidobacterium hapali	1630172	PRJNA376375	376375	Terrabacteria group	Actinobacteria	2.83431	54.5	-	MWWY01	76	2259	2029	8/18/17	8/21/17	Contig	University of Parma	SAMN06341148	GCA_002259755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/755/GCA_002259755.1_ASM225975v1	28764658	DSM 100202
Bifidobacterium aquikefiri	1653207	PRJNA376375	376375	Terrabacteria group	Actinobacteria	2.40836	52.3	-	MWXA01	18	2042	1949	8/18/17	8/21/17	Contig	University of Parma	SAMN06341146	GCA_002259795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/795/GCA_002259795.1_ASM225979v1	28764658	LMG 28769
Hahella sp. CCB-MM4	1926491	PRJNA356491	356491	Proteobacteria	Gammaproteobacteria	6.66374	49.8	-	MRYI01	161	5862	5729	8/18/17	8/21/17	Contig	"Center For Chemical Biology, USM"	SAMN06114548	GCA_002260525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/525/GCA_002260525.1_ASM226052v1	-	CCB-MM4
Hydrocoleum sp. CS-953	1671698	PRJNA287194	287194	Terrabacteria group	Cyanobacteria/Melainabacteria group	8.3872	36.4	-	LGSU01	1501	6743	5354	8/18/17	8/21/17	Scaffold	Griffith University	SAMN03777211	GCA_002260545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/545/GCA_002260545.1_ASM226054v1	-	CS-953
Bacillus praedii	1742358	PRJNA299436	299436	Terrabacteria group	Firmicutes	5.27146	37.4	-	LMBX01	87	5165	4997	11/6/15	8/30/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04202597	GCA_001439605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/605/GCA_001439605.1_ASM143960v1	-	FJAT-25547
Rhizobium aethiopicum	1138170	PRJEB14988	336141	Proteobacteria	Alphaproteobacteria	6.55759	61.1	-	FMAJ01	62	6440	5991	8/3/16	8/30/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487815	GCA_900094625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/625/GCA_900094625.1_IMG-taxon_2615840624_annotated_assembly	-	HBR26
Chromobacterium sphagni	1903179	PRJNA342529	342529	Proteobacteria	Betaproteobacteria	4.74203	63.4	-	MKCT01	104	4564	4198	10/27/16	8/30/17	Contig	USDA-ARS	SAMN05761786	GCA_001855555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/555/GCA_001855555.1_ASM185555v1	28829025	IIBBL 14B-1
Pannonibacter sp. I15F10I1	2003580	PRJEB20968	395452	Proteobacteria	Alphaproteobacteria	5.02783	63.5	-	FYAN01	29	-	-	7/22/17	7/22/17	Contig	Griffith University	SAMEA104113271	GCA_900185665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/665/GCA_900185665.1_I15F10I1_Assembly_1	-	-
Streptomyces kasugaensis	1946	PRJNA382208	382208	Terrabacteria group	Actinobacteria	9.26244	71.4	-	NDXL01	5	7951	7429	8/21/17	8/23/17	Scaffold	Shanghai Jiao Tong University	SAMN06701920	GCA_002261115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/115/GCA_002261115.1_ASM226111v1	-	BCRC 12349
Siphonobacter sp. BAB-5385	1864822	PRJNA361052	361052	FCB group	Bacteroidetes/Chlorobi group	6.53233	48.6	-	NMPS01	266	5404	4992	8/21/17	8/23/17	Contig	Gujarat State Biotechnology Mission	SAMN07296296	GCA_002261125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/125/GCA_002261125.1_ASM226112v1	-	BAB-5385
Bacillaceae bacterium SAS-127	2015203	PRJNA391393	391393	Terrabacteria group	Firmicutes	3.65048	39.7	-	NKXN01	118	3688	3487	8/21/17	8/23/17	Contig	CSIR-Institute of Microbial Technology	SAMN07267300	GCA_002261155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/155/GCA_002261155.1_ASM226115v1	-	SAS-127
Bordetella genomosp. 4	463044	PRJNA385118	385118	Proteobacteria	Betaproteobacteria	5.52675	59.6	-	NEVQ01	23	5084	4963	8/21/17	8/23/17	Contig	University of Michigan	SAMN06767133	GCA_002261185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/185/GCA_002261185.1_ASM226118v1	-	AU9919
Bordetella genomosp. 11	1416808	PRJNA385118	385118	Proteobacteria	Betaproteobacteria	6.50871	65.7	-	NEVS01	4	5881	5726	8/21/17	8/23/17	Contig	University of Michigan	SAMN06767131	GCA_002261215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/215/GCA_002261215.1_ASM226121v1	-	AU8856
Bordetella genomosp. 10	1416804	PRJNA385118	385118	Proteobacteria	Betaproteobacteria	7.15398	67.2	-	NEVM01	5	6229	6071	8/21/17	8/23/17	Contig	University of Michigan	SAMN06767138	GCA_002261225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/225/GCA_002261225.1_ASM226122v1	-	AU16122
Bordetella genomosp. 7	1416805	PRJNA385118	385118	Proteobacteria	Betaproteobacteria	4.13089	65.3	-	NEVK01	8	3910	3805	8/21/17	8/23/17	Contig	University of Michigan	SAMN06767141	GCA_002261265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/265/GCA_002261265.1_ASM226126v1	-	AU18089
Sphingobacterium cellulitidis	1768011	PRJNA395487	395487	FCB group	Bacteroidetes/Chlorobi group	4.39509	37.4	-	NOUY01	51	3765	3675	8/10/17	8/12/17	Contig	The University of Melbourne	SAMN07407601	GCA_002245765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/765/GCA_002245765.1_ASM224576v1	-	R-53745
Bordetella genomosp. 5	1395608	PRJNA385118	385118	Proteobacteria	Betaproteobacteria	5.30483	67.3	-	NEVP01	17	4787	4647	8/21/17	8/23/17	Contig	University of Michigan	SAMN06767134	GCA_002261315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/315/GCA_002261315.1_ASM226131v1	-	AU10456
Brucella abortus bv. 9 str. C68	520455	PRJNA243877	243877	Proteobacteria	Alphaproteobacteria	3.27995	57.2352	chromosome 1:NZ_CP007705.1/CP007705.1; chromosome 2:NZ_CP007706.1/CP007706.1	-	2	3368	3150	8/15/14	3/24/17	Complete Genome	Los Alamos National Laboratory	SAMN02769911	GCA_000740195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/195/GCA_000740195.1_ASM74019v1	25237024	C68
Sphingomonadales bacterium 28-55-16	1970589	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.35288	55.3	-	NCGG01	42	2278	2223	8/16/17	8/16/17	Contig	None	SAMN06622300	GCA_002278855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/855/GCA_002278855.1_ASM227885v1	-	-
Gallionellales bacterium 39-52-133	1970512	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	3.27834	52.6	-	NCJL01	17	3170	3093	8/16/17	8/16/17	Contig	None	SAMN06622217	GCA_002278935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/935/GCA_002278935.1_ASM227893v1	-	-
Sphingobacteriia bacterium 39-36-14	1970577	PRJNA379596	379596	FCB group	Bacteroidetes/Chlorobi group	2.91512	36.4	-	NCJE01	123	2699	2626	8/16/17	8/16/17	Scaffold	None	SAMN06622224	GCA_002278915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/915/GCA_002278915.1_ASM227891v1	-	-
Xanthomonadales bacterium 15-68-25	1970613	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	3.89342	68.3	-	NCKB01	22	3504	3430	8/16/17	8/16/17	Contig	None	SAMN06622201	GCA_002279065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/065/GCA_002279065.1_ASM227906v1	-	-
Acidobacteria bacterium 21-70-11	1970485	PRJNA379596	379596	Acidobacteria	unclassified Acidobacteria	2.80526	70	-	NCBG01	514	2710	2582	8/16/17	8/16/17	Contig	None	SAMN06622430	GCA_002279205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/205/GCA_002279205.1_ASM227920v1	-	-
Acidobacteria bacterium 37-65-4	1970486	PRJNA379596	379596	Acidobacteria	unclassified Acidobacteria	1.1517	65	-	NCBN01	702	1316	1273	8/16/17	8/16/17	Scaffold	None	SAMN06622423	GCA_002279195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/195/GCA_002279195.1_ASM227919v1	-	-
Planctomycetia bacterium 21-64-5	1970542	PRJNA379596	379596	PVC group	Planctomycetes	4.26063	63.9	-	NCAZ01	1537	3966	3794	8/16/17	8/16/17	Scaffold	None	SAMN06622438	GCA_002279215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/215/GCA_002279215.1_ASM227921v1	-	-
Deltaproteobacteria bacterium 37-65-8	1970507	PRJNA379596	379596	Proteobacteria	delta/epsilon subdivisions	1.82826	65.3	-	NCBQ01	193	1890	1795	8/16/17	8/16/17	Scaffold	None	SAMN06622420	GCA_002279275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/275/GCA_002279275.1_ASM227927v1	-	-
Acidobacteria bacterium 37-71-11	1970487	PRJNA379596	379596	Acidobacteria	unclassified Acidobacteria	3.01666	70.4	-	NCBR01	407	2852	2724	8/16/17	8/16/17	Scaffold	None	SAMN06622419	GCA_002279285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/285/GCA_002279285.1_ASM227928v1	-	-
Rhodospirillales bacterium 12-54-5	1970562	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	0.553815	53.7	-	NCBY01	225	645	600	8/16/17	8/16/17	Scaffold	None	SAMN06622412	GCA_002279405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/405/GCA_002279405.1_ASM227940v1	-	-
Solibacteres bacterium 12-62-4	1970571	PRJNA379596	379596	Acidobacteria	Solibacteres	1.88623	62.2	-	NCBZ01	808	2221	2046	8/16/17	8/16/17	Scaffold	None	SAMN06622411	GCA_002279415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/415/GCA_002279415.1_ASM227941v1	-	-
Planctomycetales bacterium 12-60-4	1970541	PRJNA379596	379596	PVC group	Planctomycetes	3.63582	59.7	-	NCBX01	1752	3947	3679	8/16/17	8/16/17	Scaffold	None	SAMN06622413	GCA_002279375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/375/GCA_002279375.1_ASM227937v1	-	-
Rhodospirillales bacterium 12-71-4	1970563	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	1.07312	71.4	-	NCCB01	435	1306	1186	8/16/17	8/16/17	Scaffold	None	SAMN06622409	GCA_002279455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/455/GCA_002279455.1_ASM227945v1	-	-
Sphingobacteriales bacterium 12-47-4	1970580	PRJNA379596	379596	FCB group	Bacteroidetes/Chlorobi group	1.95196	47.1	-	NCCA01	734	2036	1866	8/16/17	8/16/17	Scaffold	None	SAMN06622410	GCA_002279465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/465/GCA_002279465.1_ASM227946v1	-	-
Burkholderiales bacterium 12-64-5	1970494	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	1.30636	64.2	-	NCCC01	779	1540	1378	8/16/17	8/16/17	Scaffold	None	SAMN06622408	GCA_002279485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/485/GCA_002279485.1_ASM227948v1	-	-
Sphingomonadales bacterium 12-62-5	1970585	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	1.22259	65.1	-	NCCE01	158	1321	1166	8/16/17	8/16/17	Scaffold	None	SAMN06622406	GCA_002279525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/525/GCA_002279525.1_ASM227952v1	-	-
Hydrogenophilales bacterium 12-63-5	1970516	PRJNA379596	379596	Proteobacteria	Hydrogenophilalia	0.701319	63.3	-	NCCF01	373	858	773	8/16/17	8/16/17	Scaffold	None	SAMN06622405	GCA_002279535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/535/GCA_002279535.1_ASM227953v1	-	-
Chthoniobacter sp. 12-60-6	1970334	PRJNA379596	379596	PVC group	Verrucomicrobia	1.63542	60.2	-	NCCH01	457	1567	1465	8/16/17	8/16/17	Scaffold	None	SAMN06622403	GCA_002279575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/575/GCA_002279575.1_ASM227957v1	-	-
Hydrogenophilales bacterium 12-64-6	1970518	PRJNA379596	379596	Proteobacteria	Hydrogenophilalia	0.42875	63.9	-	NCCI01	62	485	418	8/16/17	8/16/17	Scaffold	None	SAMN06622402	GCA_002279605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/605/GCA_002279605.1_ASM227960v1	-	-
Azorhizobium sp. 12-66-6	1970318	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	1.88407	66.5	-	NCCJ01	931	2167	1977	8/16/17	8/16/17	Scaffold	None	SAMN06622401	GCA_002279595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/595/GCA_002279595.1_ASM227959v1	-	-
Acetobacter fabarum	483199	PRJNA375758	375758	Proteobacteria	Alphaproteobacteria	3.0277	57.8	-	NCXK01	155	2852	2681	8/29/17	8/30/17	Contig	SysMilk	SAMN06718501	GCA_002276555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/555/GCA_002276555.1_ASM227655v1	-	KR
Vibrio spartinae	1918945	PRJEB17679	357216	Proteobacteria	Gammaproteobacteria	5.10427	45.3	-	FSSB01	62	4608	4370	12/16/16	9/5/17	Contig	UVEG	SAMEA26613418	GCA_900149295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/295/GCA_900149295.1_V.spartinae_CECT9026T_Velvet_Prokka	-	CECT 9026
Vibrio palustris	1918946	PRJEB17681	357215	Proteobacteria	Gammaproteobacteria	3.70101	43.4	-	FUFT01	25	3433	3281	2/6/17	9/5/17	Contig	UVEG	SAMEA26629168	GCA_900162645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/645/GCA_900162645.1_V_palustris_CECT9027T_Velvet_Prokka_EMBL	-	CECT 9027
Vagococcus martis	1768210	PRJNA362683	362683	Terrabacteria group	Firmicutes	2.56192	33.8	-	MVAB01	3	2481	2325	3/14/17	3/16/17	Contig	Kyung Hee University	SAMN06241148	GCA_002026305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/305/GCA_002026305.1_ASM202630v1	-	D7T301
Citrobacter portucalensis	1639133	PRJNA369027	369027	Proteobacteria	Gammaproteobacteria	4.91631	52	-	MVFY01	40	4833	4597	3/20/17	9/5/17	Contig	"Faculty of Pharmacy, University of Porto"	SAMN06214708	GCA_002042885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/885/GCA_002042885.1_ASM204288v1	-	A60
Brucella abortus	235	PRJNA243873	243873	Proteobacteria	Alphaproteobacteria	3.28031	57.2352	chromosome 1:NZ_CP007663.1/CP007663.1; chromosome 2:NZ_CP007662.1/CP007662.1	-	2	3363	3147	8/15/14	3/24/17	Complete Genome	Los Alamos National Laboratory	SAMN02767544	GCA_000740295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/295/GCA_000740295.1_ASM74029v1	25237024	63 75
Paraferrimonas sedimenticola	375674	PRJNA399243	399243	Proteobacteria	Gammaproteobacteria	3.80223	50.8	-	NRIR01	23	3510	3418	8/31/17	9/2/17	Contig	"Third Institute of Oceanography, SOA"	SAMN07528626	GCA_002282855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/855/GCA_002282855.1_ASM228285v1	-	NBRC 101628
Microcystis wesenbergii LE013-01	1892905	PRJNA340089	340089	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.99565	43.2	-	MTBU01	286	-	-	8/31/17	8/31/17	Scaffold	University of Michigan	SAMN05645801	GCA_002282955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/955/GCA_002282955.1_ASM228295v1	-	-
Rubrivirga marina	1196024	PRJNA355608	355608	Rhodothermaeota	Rhodothermia	4.98107	72.4	-	MQWD01	11	4261	4136	8/31/17	9/2/17	Scaffold	"Atmosphere and Ocean Research Institute, The University of Tokyo"	SAMN06091685	GCA_002283365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/365/GCA_002283365.1_ASM228336v1	-	SAORIC-28
Rubrivirga sp. SAORIC476	1961794	PRJNA376083	376083	Rhodothermaeota	Rhodothermia	4.48043	71.3	-	MVOI01	19	3825	3718	8/31/17	9/2/17	Scaffold	"Atmosphere and Ocean Research Institute, The University of Tokyo"	SAMN06349962	GCA_002283555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/555/GCA_002283555.1_ASM228355v1	-	SAORIC476
Bacillaceae bacterium SAOS 7	2015052	PRJNA390294	390294	Terrabacteria group	Firmicutes	3.59043	39.9	-	NKQE01	73	3626	3443	8/31/17	9/2/17	Contig	CSIR-Institute of Microbial Technology	SAMN07229621	GCA_002283755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/755/GCA_002283755.1_ASM228375v1	-	SAOS 7
Mesorhizobium mediterraneum	43617	PRJNA391224	391224	Proteobacteria	Alphaproteobacteria	7.19684	62	-	NPKI01	52	7122	6632	8/31/17	9/2/17	Contig	Zhengzhou University of Light Industry	SAMN07259542	GCA_002284565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/565/GCA_002284565.1_ASM228456v1	-	USDA 3392
Mesorhizobium temperatum	241416	PRJNA391225	391225	Proteobacteria	Alphaproteobacteria	7.16536	61.9	-	NPKJ01	77	7089	6526	8/31/17	9/2/17	Contig	Zhengzhou University of Light Industry	SAMN07259767	GCA_002284575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/575/GCA_002284575.1_ASM228457v1	-	SDW018
Cronobacter turicensis z3032	693216	PRJEA39965	39965	Proteobacteria	Gammaproteobacteria	4.59909	57.2342	chromosome:NC_013282.2/FN543093.2; plasmid pCTU1:NC_013283.1/FN543094.1; plasmid pCTU2:NC_013284.1/FN543095.1; plasmid pCTU3:NC_013285.1/FN543096.1	-	4	4441	4211	10/2/09	4/7/17	Complete Genome	Technische Universitaet Muenchen	SAMEA2272673	GCA_000027065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/027/065/GCA_000027065.2_ASM2706v1	21037008	-
Roseobacter litoralis Och 149	391595	PRJNA19357	19357	Proteobacteria	Alphaproteobacteria	4.74545	57.2249	chromosome:NC_015730.1/CP002623.1; plasmid pRLO149_63:NC_015729.1/CP002626.1; plasmid pRLO149_83:NC_015728.1/CP002625.1; plasmid pRLO149_94:NC_015741.1/CP002624.1	-	4	4582	4429	6/28/11	5/19/17	Complete Genome	Moore Foundation	SAMN02603624	GCA_000154785.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/785/GCA_000154785.2_ASM15478v2	21693016	Och 149
Klebsiella pneumoniae	573	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	5.59817	57.2235	chromosome:NZ_CP021740.1/CP021740.1; plasmid tig00000001:NZ_CP021741.1/CP021741.1; plasmid tig00000002jNODE_23:NZ_CP021742.1/CP021742.1; plasmid tig00000003:NZ_CP021743.1/CP021743.1	-	4	5671	5413	6/13/17	6/15/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014967	GCA_002192315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/315/GCA_002192315.1_ASM219231v1	-	AR_0126
Klebsiella pneumoniae	573	PRJNA246471	246471	Proteobacteria	Gammaproteobacteria	5.59711	57.2235	chromosome:NZ_CP017934.1/CP017934.1; plasmid pCAV1016-76:NZ_CP017936.1/CP017936.1; plasmid pCAV1016-90:NZ_CP017935.1/CP017935.1; plasmid pKPC_UVA01:NZ_CP017937.1/CP017937.1	-	4	5638	5391	11/7/16	2/21/17	Complete Genome	University of Oxford	SAMN03024573	GCA_001870165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/165/GCA_001870165.1_ASM187016v1	25561339	CAV1016
Candidatus Dactylopiibacterium carminicum	857335	PRJNA355137	355137	Proteobacteria	Betaproteobacteria	3.58938	62.7	-	MQNN01	122	3527	3212	9/1/17	9/4/17	Contig	CCG-UNAM	SAMN06064272	GCA_002284945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/945/GCA_002284945.1_ASM228494v1	-	NFE1
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA243858	243858	Proteobacteria	Gammaproteobacteria	5.69522	57.2179	chromosome:NZ_CP009771.1/CP009771.1; plasmid pEA1509_B:NZ_CP009772.1/CP009772.1; plasmid pKPC-63d:NZ_CP009773.1/CP009773.1; plasmid pNJST258N3-62b:NZ_CP009774.1/CP009774.1	-	4	5727	5478	11/12/14	2/21/17	Complete Genome	NIH	SAMN02720898	GCA_000775375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/375/GCA_000775375.1_ASM77537v1	25232178	KPNIH33
Rhizobium esperanzae	1967781	PRJNA378648	378648	Proteobacteria	Alphaproteobacteria	6.29406	61.1	-	MXPU01	77	6190	5754	6/21/17	9/18/17	Contig	Embrapa	SAMN06555453	GCA_002204185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/185/GCA_002204185.1_ASM220418v1	-	CNPSo 668
Candidatus Izimaplasma sp. ZiA1	2024899	PRJNA397120	397120	Terrabacteria group	Tenericutes	1.88401	29.6	-	NQYJ01	34	1874	1803	9/4/17	9/6/17	Scaffold	Korea Institute of Geoscience and Mineral Resources	SAMN07449349	GCA_002285055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/055/GCA_002285055.1_ASM228505v1	-	ZiA1
Comamonadaceae bacterium NML00-0135	2029116	PRJNA398363	398363	Proteobacteria	Betaproteobacteria	3.09774	66.9	-	NSJB01	22	2683	2583	9/4/17	9/6/17	Contig	National Microbiology Laboratory/ Public Health Agency of Canada	SAMN07511442	GCA_002285265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/265/GCA_002285265.1_ASM228526v1	-	NML00-0135
Comamonadaceae bacterium NML79-0751	2029112	PRJNA398363	398363	Proteobacteria	Betaproteobacteria	3.18798	66.6	-	NSJD01	55	2841	2700	9/4/17	9/6/17	Contig	National Microbiology Laboratory/ Public Health Agency of Canada	SAMN07511438	GCA_002285275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/275/GCA_002285275.1_ASM228527v1	-	NML79-0751
Comamonadaceae bacterium NML03-0146	2029117	PRJNA398363	398363	Proteobacteria	Betaproteobacteria	3.0817	65.4	-	NSJF01	13	2728	2621	9/4/17	9/6/17	Contig	National Microbiology Laboratory/ Public Health Agency of Canada	SAMN07511443	GCA_002285285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/285/GCA_002285285.1_ASM228528v1	-	NML03-0146
Comamonadaceae bacterium NML97-0112	2029115	PRJNA398363	398363	Proteobacteria	Betaproteobacteria	3.24283	65.3	-	NSJC01	66	2879	2722	9/4/17	9/6/17	Contig	National Microbiology Laboratory/ Public Health Agency of Canada	SAMN07511441	GCA_002285255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/255/GCA_002285255.1_ASM228525v1	-	NML97-0112
Comamonadaceae bacterium NML120219	2029111	PRJNA398363	398363	Proteobacteria	Betaproteobacteria	3.37988	65.1	-	NSJE01	69	2999	2828	9/4/17	9/6/17	Contig	National Microbiology Laboratory/ Public Health Agency of Canada	SAMN07511437	GCA_002285335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/335/GCA_002285335.1_ASM228533v1	-	NML120219
Mobilicoccus massiliensis	1522310	PRJEB7716	267101	Terrabacteria group	Actinobacteria	3.84196	70.5	-	CDGT01	24	3385	3263	11/19/14	9/18/17	Contig	URMITE	SAMEA3114260	GCA_000826525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/525/GCA_000826525.1_Mobilicoccus_massiliensis_SIT2	-	SIT2
Bacillus loiseleuriae	1679170	PRJNA289033	289033	Terrabacteria group	Firmicutes	5.42842	37.6	-	LFZW01	7	5137	4790	7/21/15	4/10/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN03840769	GCA_001183985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/985/GCA_001183985.1_ASM118398v1	-	FJAT-27997
Serratia oryzae	2034155	PRJNA352343	352343	Proteobacteria	Gammaproteobacteria	5.01278	53.2	-	MOXD01	81	4564	4351	1/31/17	9/18/17	Scaffold	Chinese Academy of agricultural Sciences(CAAS)	SAMN05970538	GCA_001976145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/145/GCA_001976145.1_ASM197614v1	-	J11-6
Sediminibacillus massiliensis	1926277	PRJEB18954	361239	Terrabacteria group	Firmicutes	4.3475	42.1	-	FTPA01	6	4307	4149	2/8/17	9/13/17	Scaffold	URMITE	SAMEA48421918	GCA_900156915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/915/GCA_900156915.1_PRJEB18954	-	-
Desulfobacteraceae bacterium 4572_187	1971620	PRJNA362212	362212	Proteobacteria	delta/epsilon subdivisions	2.09626	41.6	-	NBLR01	221	2163	2056	4/10/17	9/7/17	Scaffold	The University of Texas at Austin	SAMN06628316	GCA_002084375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/375/GCA_002084375.1_ASM208437v1	-	-
Actibacterium ureilyticum	1590614	PRJNA398625	398625	Proteobacteria	Alphaproteobacteria	4.1453	64.3	-	NSBT01	46	4110	3987	9/5/17	9/7/17	Contig	"Second Institute of Oceanography, State Oceanic Administration"	SAMN07514661	GCA_002285435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/435/GCA_002285435.1_ASM228543v1	-	LS-811
Klebsiella pneumoniae	573	PRJNA329409	329409	Proteobacteria	Gammaproteobacteria	5.58428	57.2174	chromosome:NZ_CP018438.1/CP018438.1; plasmid pKp_Goe_917-1:NZ_CP018441.1/CP018441.1; plasmid pKp_Goe_917-2:NZ_CP018443.1/CP018443.1; plasmid pKp_Goe_917-3:NZ_CP018442.1/CP018442.1; plasmid pKp_Goe_917-4:NZ_CP018445.1/CP018445.1; plasmid pKp_Goe_917-5:NZ_CP018444.1/CP018444.1; plasmid pKp_Goe_917-6:NZ_CP018440.1/CP018440.1; plasmid pKp_Goe_917-7:NZ_CP018446.1/CP018446.1; plasmid pKp_Goe_917-8:NZ_CP018439.1/CP018439.1	-	9	5657	5360	12/13/16	2/21/17	Complete Genome	University Medical Center Goettingen	SAMN05412453	GCA_001902415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/415/GCA_001902415.1_ASM190241v1	-	Kp_Goe_822917
Halovibrio sp. YL5-2	2032626	PRJNA400772	400772	Proteobacteria	Gammaproteobacteria	3.4951	62.1	-	NSKD01	28	3317	3217	9/6/17	9/8/17	Contig	"Institute of Agricultural c and Regional Planning, Chinese Academy of Agricultural Sciences"	SAMN07573030	GCA_002286965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/965/GCA_002286965.1_ASM228696v1	-	YL5-2
Aliifodinibius sp. WN023	2032627	PRJNA400775	400775	Balneolaeota	Balneolia	3.58328	42.2	-	NSKE01	39	3175	3091	9/6/17	9/8/17	Contig	"Institute of Agricultural c and Regional Planning, Chinese Academy of Agricultural Sciences"	SAMN07573060	GCA_002287075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/075/GCA_002287075.1_ASM228707v1	-	WN023
Methanobacterium bryantii	2161	PRJNA300714	300714	Euryarchaeota	Methanobacteria	3.46637	33.2	-	LMVM01	41	3297	3204	9/6/17	9/8/17	Contig	University of California Santa Barbara	SAMN04229035	GCA_002287175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/175/GCA_002287175.1_ASM228717v1	28826405	M.o.H.
Methanosphaera cuniculi	1077256	PRJNA300716	300716	Euryarchaeota	Methanobacteria	1.9282	28	-	LMVN01	29	1666	1605	9/6/17	9/8/17	Contig	University of California Santa Barbara	SAMN04229037	GCA_002287195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/195/GCA_002287195.1_ASM228719v1	28826405	1R-7
Methanocorpusculum parvum	2193	PRJNA300717	300717	Euryarchaeota	Methanomicrobia	1.70913	51.4	-	LMVO01	47	1758	1688	9/6/17	9/8/17	Contig	University of California Santa Barbara	SAMN04229038	GCA_002287215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/215/GCA_002287215.1_ASM228721v1	28826405	XII
Methanosarcina spelaei	1036679	PRJNA300715	300715	Euryarchaeota	Methanomicrobia	5.0886	38.7	-	LMVP01	559	4233	3774	9/6/17	9/8/17	Contig	University of California Santa Barbara	SAMN04229036	GCA_002287235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/235/GCA_002287235.1_ASM228723v1	28826405	MC-15
Arsenophonus sp. ENCA	1987579	PRJNA386686	386686	Proteobacteria	Gammaproteobacteria	3.22853	39.5	-	NHNG01	818	4113	3584	9/6/17	9/6/17	Contig	University of Hawaii	SAMN06919900	GCA_002287155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/155/GCA_002287155.1_ASM228715v1	28854637	-
Tamilnaduibacter salinus	1484056	PRJNA393390	393390	Proteobacteria	Gammaproteobacteria	3.4928	60.7	-	NMPM01	197	3266	3051	9/6/17	9/8/17	Contig	CSIR-Institute of Microbial Technology	SAMN07331643	GCA_002287355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/355/GCA_002287355.1_ASM228735v1	-	Mi-7
Candidatus Methanoculleus thermohydrogenotrophicum	1671625	PRJNA283298	283298	Euryarchaeota	Methanomicrobia	2.15317	59.2	-	LFRN01	287	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03776724	GCA_001512375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/375/GCA_001512375.1_ASM151237v1	26839589	-
Klebsiella pneumoniae	573	PRJNA259789	259789	Proteobacteria	Gammaproteobacteria	5.64991	57.2079	chromosome:NZ_CP010392.1/CP010392.1; plasmid p34618-13.841kb:NZ_CP010394.1/CP010394.1; plasmid p34618-207.543kb:NZ_CP010393.1/CP010393.1; plasmid p34618-43.380kb:NZ_CP010395.1/CP010395.1; plasmid p34618-71.572kb:NZ_CP010396.1/CP010396.1	-	5	5752	5487	1/5/15	2/21/17	Complete Genome	JCVI	SAMN03067424	GCA_000814305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/305/GCA_000814305.1_ASM81430v1	-	34618
Klebsiella pneumoniae	573	PRJNA284365	284365	Proteobacteria	Gammaproteobacteria	5.68147	57.207	chromosome:NZ_CP014647.1/CP014647.1; plasmid pKPN-821:NZ_CP014648.1/CP014648.1; plasmid pKPN-fff:NZ_CP014649.1/CP014649.1; plasmid pKpQIL-6e6:NZ_CP014650.1/CP014650.1	-	4	5827	5574	6/22/16	2/21/17	Complete Genome	NHGRI/NIH	SAMN03701676	GCA_001675125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/125/GCA_001675125.1_ASM167512v1	-	KPNIH36
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA309157	309157	Proteobacteria	Gammaproteobacteria	5.53519	57.2067	chromosome:NZ_CP014004.1/CP014004.1; plasmid unnamed1:NZ_CP014005.1/CP014005.1; plasmid unnamed2:NZ_CP014006.1/CP014006.1	-	3	5524	5280	1/21/16	2/21/17	Complete Genome	The First Affiliated Hospital of Nanchang University	SAMN04421276	GCA_001521895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/895/GCA_001521895.1_ASM152189v1	26988061	NUHL24835
Klebsiella pneumoniae	573	PRJNA259789	259789	Proteobacteria	Gammaproteobacteria	5.6208	57.2065	chromosome:NZ_CP010361.1/CP010361.1; plasmid unnamed_1:NZ_CP010574.1/CP010574.1; plasmid unnamed_2:NZ_CP010575.1/CP010575.1; plasmid unnamed_3:NZ_CP010576.1/CP010576.1	-	4	5711	5392	1/5/15	2/21/17	Complete Genome	JCVI	SAMN03067420	GCA_000807395.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/395/GCA_000807395.3_ASM80739v3	-	32192
Marinobacter sp. LQ44	1749259	PRJNA301177	301177	Proteobacteria	Gammaproteobacteria	4.43556	57.2	chromosome:NZ_CP014754.1/CP014754.1	-	1	4118	3925	3/21/16	4/12/17	Complete Genome	"Third Institute of Oceanography, State Oceanic Administration"	SAMN04235750	GCA_001447155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/447/155/GCA_001447155.2_ASM144715v2	-	LQ44
Klebsiella pneumoniae subsp. pneumoniae 1158	1392499	PRJNA217288	217288	Proteobacteria	Gammaproteobacteria	5.34104	57.2	chromosome:NZ_CP006722.1/CP006722.1	-	1	5206	4984	1/6/15	2/21/17	Complete Genome	National Chung Hsing University	SAMN03097203	GCA_000814805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/805/GCA_000814805.1_ASM81480v1	-	1158
Opitutae bacterium Tous-C5TDCM	1982322	PRJNA342151	342151	PVC group	Verrucomicrobia	3.99089	62.9	-	NEUR01	61	3251	3160	9/8/17	9/8/17	Contig	Universidad Miguel Hernandez	SAMN06820756	GCA_002288405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/405/GCA_002288405.1_ASM228840v1	-	-
Verrucomicrobiae bacterium Tous-C3TDCM	1982330	PRJNA342151	342151	PVC group	Verrucomicrobia	2.96253	52	-	NEUP01	83	2565	2502	9/8/17	9/8/17	Contig	Universidad Miguel Hernandez	SAMN06820758	GCA_002288415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/415/GCA_002288415.1_ASM228841v1	-	-
Verrucomicrobiae bacterium Tous-C2TDCM	1982329	PRJNA342151	342151	PVC group	Verrucomicrobia	1.84737	61.7	-	NEUQ01	101	1598	1562	9/8/17	9/8/17	Contig	Universidad Miguel Hernandez	SAMN06820757	GCA_002288445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/445/GCA_002288445.1_ASM228844v1	-	-
Opitutae bacterium Tous-C1TDCM	1982319	PRJNA342151	342151	PVC group	Verrucomicrobia	4.14993	67.7	-	NEUS01	160	3348	3244	9/8/17	9/8/17	Contig	Universidad Miguel Hernandez	SAMN06820755	GCA_002288455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/455/GCA_002288455.1_ASM228845v1	-	-
Silvanigrella aquatica	1915309	PRJNA310399	310399	Proteobacteria	Oligoflexia	3.50671	32.9284	chromosome:CP017834.1; chromosome 1:CP017838.1; chromosome 2:CP017837.1; plasmid pNonnen1:CP017835.1; plasmid pNonnen2:CP017836.1	-	5	2969	2893	12/13/16	12/13/16	Chromosome	University of Innsbruck	SAMN04451922	GCA_001907975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/975/GCA_001907975.1_ASM190797v1	-	MWH-Nonnen-W8red
Zobellia sp. OII3	2034520	PRJNA377409	377409	FCB group	Bacteroidetes/Chlorobi group	5.39572	42.7	-	MWRZ01	41	4478	4400	6/29/17	7/1/17	Contig	University of Bonn	SAMN06461361	GCA_002211465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/465/GCA_002211465.1_ASM221146v1	-	OII3
Clostridium mediterraneense	1805472	PRJEB14542	326495	Terrabacteria group	Firmicutes	3.08334	27.9	-	FLSO01	5	2808	2619	6/25/16	9/19/17	Scaffold	URMITE	SAMEA4043121	GCA_900091705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/705/GCA_900091705.1_PRJEB14542	-	Marseille-P2434
Lactobacillus pentosiphilus	1714682	PRJDB4275	391104	Terrabacteria group	Firmicutes	2.54853	45	-	BCMH01	111	2364	2266	6/13/17	9/18/17	Contig	NARO Institute of Livestock and Grassland Science	SAMD00042397	GCA_002217965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/965/GCA_002217965.1_ASM221796v1	-	IWT140
Calothrix elsteri CCALA 953	987040	PRJNA400784	400784	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.00647	39.2	-	NTFS01	801	6103	5470	9/11/17	9/13/17	Scaffold	University of Iceland	SAMN07573429	GCA_002289455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/455/GCA_002289455.1_ASM228945v1	-	CCALA 953
Dietzia natronolimnaea	161920	PRJNA391560	391560	Terrabacteria group	Actinobacteria	3.79135	70	-	NTGA01	139	3556	3375	9/11/17	9/13/17	Contig	Tongji University	SAMN07270680	GCA_002289575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/575/GCA_002289575.1_ASM228957v1	-	S-XJ-1
Verrucomicrobiae bacterium AMD-G2	1982328	PRJNA238866	238866	PVC group	Verrucomicrobia	3.25812	52.1	-	NEUM01	34	2759	2700	9/12/17	9/12/17	Contig	Evolutionary Genomics Group (UMH-EGG)	SAMN06820743	GCA_002290545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/545/GCA_002290545.1_ASM229054v1	-	-
Spartobacteria bacterium AMD-G4	1982325	PRJNA238866	238866	PVC group	Verrucomicrobia	1.81543	56.6	-	NEUK01	74	1787	1729	9/12/17	9/12/17	Scaffold	Evolutionary Genomics Group (UMH-EGG)	SAMN06820745	GCA_002290555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/555/GCA_002290555.1_ASM229055v1	-	-
Opitutae bacterium AMD-G3	1982317	PRJNA238866	238866	PVC group	Verrucomicrobia	1.8996	64.5	-	NEUL01	59	1714	1657	9/12/17	9/12/17	Scaffold	Evolutionary Genomics Group (UMH-EGG)	SAMN06820744	GCA_002290585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/585/GCA_002290585.1_ASM229058v1	-	-
Opitutae bacterium AMD-G1	1982316	PRJNA238866	238866	PVC group	Verrucomicrobia	1.54262	64.1	-	NEUN01	66	1419	1300	9/12/17	9/12/17	Contig	Evolutionary Genomics Group (UMH-EGG)	SAMN06820742	GCA_002290595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/595/GCA_002290595.1_ASM229059v1	-	-
Spartobacteria bacterium AMD-G5	1982326	PRJNA238866	238866	PVC group	Verrucomicrobia	0.558294	58.6	-	NEUJ01	40	607	574	9/12/17	9/12/17	Contig	Evolutionary Genomics Group (UMH-EGG)	SAMN06820746	GCA_002290625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/625/GCA_002290625.1_ASM229062v1	-	-
Coxiellaceae bacterium RA15029	2016198	PRJNA392245	392245	Proteobacteria	Gammaproteobacteria	1.48957	39.3	-	NMOS01	51	1415	1364	9/12/17	9/12/17	Contig	"Centre for environment, fisheries and aquaculture sciences"	SAMN07286128	GCA_002290645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/645/GCA_002290645.1_ASM229064v1	-	-
Brucella pinnipedialis B2/94	520461	PRJNA41867	41867	Proteobacteria	Alphaproteobacteria	3.39927	57.2	chromosome 1:NC_015857.1/CP002078.1; chromosome 2:NC_015858.1/CP002079.1	-	2	3478	3276	7/20/11	4/7/17	Complete Genome	INRA	SAMN02603341	GCA_000221005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/005/GCA_000221005.1_ASM22100v1	21745361	B2/94
Acidilobus saccharovorans 345-15	666510	PRJNA39927	39927	TACK group	Crenarchaeota	1.49645	57.2	chromosome:NC_014374.1/CP001742.1	-	1	1531	1478	8/6/10	4/17/17	Complete Genome	Centre Bioengineering RAS	SAMN02603091	GCA_000144915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/915/GCA_000144915.1_ASM14491v1	20581186	345-15
Pseudomonadaceae bacterium UBA1017	1952767	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.15744	61.3	-	DBAF01	94	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450472	GCA_002291485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/485/GCA_002291485.1_ASM229148v1	28894102	-
Candidatus Saccharibacteria bacterium UBA1020	1953310	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.817018	51.3	-	DBAC01	8	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453559	GCA_002291505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/505/GCA_002291505.1_ASM229150v1	28894102	-
Bacteriovoracaceae bacterium UBA1018	1961475	PRJNA348753	348753	Proteobacteria	Oligoflexia	3.6365	45.9	-	DBAE01	294	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450464	GCA_002291495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/495/GCA_002291495.1_ASM229149v1	28894102	-
Deltaproteobacteria bacterium UBA1014	1948535	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	3.83015	45.6	-	DBAI01	377	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450471	GCA_002291585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/585/GCA_002291585.1_ASM229158v1	28894102	-
Candidatus Microthrix sp. UBA1013	1946153	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.64236	62	-	DBAJ01	210	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450468	GCA_002291595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/595/GCA_002291595.1_ASM229159v1	28894102	-
Akkermansiaceae bacterium UBA1009	1951347	PRJNA348753	348753	PVC group	Verrucomicrobia	3.57113	51.1	-	DBAN01	147	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455474	GCA_002291675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/675/GCA_002291675.1_ASM229167v1	28894102	-
Akkermansiaceae bacterium UBA1011	1951348	PRJNA348753	348753	PVC group	Verrucomicrobia	3.20522	52.9	-	DBAL01	380	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450466	GCA_002291645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/645/GCA_002291645.1_ASM229164v1	28894102	-
Gammaproteobacteria bacterium UBA1012	1948580	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	5.20829	54	-	DBAK01	228	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450469	GCA_002291665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/665/GCA_002291665.1_ASM229166v1	28894102	-
Flavobacteriaceae bacterium UBA1008	1951797	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.27302	39.9	-	DBAO01	164	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455473	GCA_002291725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/725/GCA_002291725.1_ASM229172v1	28894102	-
Patescibacteria group bacterium UBA1006	1948767	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.695479	37.1	-	DBAQ01	28	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457496	GCA_002291735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/735/GCA_002291735.1_ASM229173v1	28894102	-
Flavobacteriaceae bacterium UBA1005	1951796	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.76318	42.1	-	DBAR01	62	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455465	GCA_002291765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/765/GCA_002291765.1_ASM229176v1	28894102	-
Gemmatimonadales bacterium UBA1007	1951098	PRJNA348753	348753	FCB group	Gemmatimonadetes	1.62329	60.1	-	DBAP01	182	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455463	GCA_002291775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/775/GCA_002291775.1_ASM229177v1	28894102	-
Alphaproteobacteria bacterium UBA1002	1948350	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	1.88719	55.3	-	DBAU01	110	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455466	GCA_002291845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/845/GCA_002291845.1_ASM229184v1	28894102	-
Hyphomonadaceae bacterium UBA1001	1951943	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.64245	68.4	-	DBAV01	286	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455469	GCA_002291875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/875/GCA_002291875.1_ASM229187v1	28894102	-
Cyanobacteria bacterium UBA999	1947904	PRJNA348753	348753	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.77678	56.7	-	DBAX01	145	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452145	GCA_002291895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/895/GCA_002291895.1_ASM229189v1	28894102	-
Alphaproteobacteria bacterium UBA998	1948452	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.17787	61	-	DBAY01	77	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452144	GCA_002291925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/925/GCA_002291925.1_ASM229192v1	28894102	-
Tepidimonas sp. UBA997	1947650	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	2.36849	62.8	-	DBAZ01	88	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452147	GCA_002291945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/945/GCA_002291945.1_ASM229194v1	28894102	-
Rhodobacteraceae bacterium UBA996	1952817	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.52258	69	-	DBBA01	407	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452146	GCA_002291955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/955/GCA_002291955.1_ASM229195v1	28894102	-
Firmicutes bacterium UBA995	1948111	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.65436	64.8	-	DBBB01	190	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452149	GCA_002291985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/985/GCA_002291985.1_ASM229198v1	28894102	-
Firmicutes bacterium UBA994	1948110	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.44613	53.7	-	DBBC01	158	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452148	GCA_002292025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/025/GCA_002292025.1_ASM229202v1	28894102	-
Firmicutes bacterium UBA993	1948109	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.92263	49.2	-	DBBD01	163	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452151	GCA_002292015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/015/GCA_002292015.1_ASM229201v1	28894102	-
Bacteroidetes bacterium UBA987	1953176	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.62912	39.9	-	DBBJ01	164	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457234	GCA_002292105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/105/GCA_002292105.1_ASM229210v1	28894102	-
Akkermansiaceae bacterium UBA985	1951376	PRJNA348753	348753	PVC group	Verrucomicrobia	1.94859	50.2	-	DBBL01	199	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457232	GCA_002292185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/185/GCA_002292185.1_ASM229218v1	28894102	-
Cellvibrionales bacterium UBA984	1950801	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	1.7934	47.8	-	DBBM01	64	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457233	GCA_002292205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/205/GCA_002292205.1_ASM229220v1	28894102	-
Flavobacteriaceae bacterium UBA982	1951892	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.53469	38.9	-	DBBO01	117	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457239	GCA_002292245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/245/GCA_002292245.1_ASM229224v1	28894102	-
Flavobacteriaceae bacterium UBA980	1951891	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.09229	39.9	-	DBBQ01	68	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457237	GCA_002292265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/265/GCA_002292265.1_ASM229226v1	28894102	-
Proteobacteria bacterium UBA981	1948226	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	4.64488	56.9	-	DBBP01	36	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457236	GCA_002292285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/285/GCA_002292285.1_ASM229228v1	28894102	-
Flavobacteriales bacterium UBA979	1951094	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.03513	49.7	-	DBBR01	109	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451942	GCA_002292325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/325/GCA_002292325.1_ASM229232v1	28894102	-
Opitutae bacterium UBA977	1948746	PRJNA348753	348753	PVC group	Verrucomicrobia	2.43264	51.6	-	DBBT01	139	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451936	GCA_002292345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/345/GCA_002292345.1_ASM229234v1	28894102	-
Flammeovirgaceae bacterium UBA976	1951795	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.57942	37.8	-	DBBU01	75	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451935	GCA_002292365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/365/GCA_002292365.1_ASM229236v1	28894102	-
Methylococcaceae bacterium UBA975	1952229	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.32836	44.8	-	DBBV01	24	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451934	GCA_002292375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/375/GCA_002292375.1_ASM229237v1	28894102	-
Flavobacteriales bacterium UBA974	1951093	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.44	40.3	-	DBBW01	28	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451933	GCA_002292405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/405/GCA_002292405.1_ASM229240v1	28894102	-
Thiotrichaceae bacterium UBA973	1953018	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.44966	40.7	-	DBBX01	31	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451940	GCA_002292815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/815/GCA_002292815.1_ASM229281v1	28894102	-
Bacillales bacterium UBA970	1950366	PRJNA348753	348753	Terrabacteria group	Firmicutes	0.975355	39.9	-	DBCA01	121	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451937	GCA_002292805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/805/GCA_002292805.1_ASM229280v1	28894102	-
Alcaligenaceae bacterium UBA971	1951378	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	2.79233	52	-	DBBZ01	324	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451938	GCA_002292845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/845/GCA_002292845.1_ASM229284v1	28894102	-
Flavobacteriales bacterium UBA972	1951092	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.60227	55.8	-	DBBY01	68	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451939	GCA_002292855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/855/GCA_002292855.1_ASM229285v1	28894102	-
Phycisphaerales bacterium UBA966	1951211	PRJNA348753	348753	PVC group	Planctomycetes	2.63577	59.3	-	DBCE01	271	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456958	GCA_002292895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/895/GCA_002292895.1_ASM229289v1	28894102	-
Roseiflexaceae bacterium UBA965	1953071	PRJNA348753	348753	Terrabacteria group	Chloroflexi	3.24417	53.2	-	DBCF01	309	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456959	GCA_002292925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/925/GCA_002292925.1_ASM229292v1	28894102	-
Proteobacteria bacterium UBA964	1948225	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	2.43549	66.5	-	DBCG01	143	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456960	GCA_002292945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/945/GCA_002292945.1_ASM229294v1	28894102	-
Microbacteriaceae bacterium UBA963	1952255	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.43318	60.9	-	DBCH01	154	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456953	GCA_002292955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/955/GCA_002292955.1_ASM229295v1	28894102	-
Ignavibacteria bacterium UBA961	1948688	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.71405	40.6	-	DBCJ01	141	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456955	GCA_002293005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/005/GCA_002293005.1_ASM229300v1	28894102	-
Actinobacteria bacterium UBA959	1948349	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.22253	44.2	-	DBCL01	18	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451660	GCA_002293025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/025/GCA_002293025.1_ASM229302v1	28894102	-
Flavobacteriales bacterium UBA958	1951091	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.3846	41.8	-	DBCM01	164	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451659	GCA_002293045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/045/GCA_002293045.1_ASM229304v1	28894102	-
Microbacteriaceae bacterium UBA960	1952254	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.21782	58.7	-	DBCK01	82	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456956	GCA_002293055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/055/GCA_002293055.1_ASM229305v1	28894102	-
Opitutae bacterium UBA957	1948745	PRJNA348753	348753	PVC group	Verrucomicrobia	2.275	64	-	DBCN01	161	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451666	GCA_002293065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/065/GCA_002293065.1_ASM229306v1	28894102	-
Bacteroidetes bacterium UBA955	1953175	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.87631	45.1	-	DBCP01	165	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451668	GCA_002293105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/105/GCA_002293105.1_ASM229310v1	28894102	-
Opitutae bacterium UBA953	1948744	PRJNA348753	348753	PVC group	Verrucomicrobia	2.16489	64	-	DBCR01	84	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451662	GCA_002293125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/125/GCA_002293125.1_ASM229312v1	28894102	-
Akkermansiaceae bacterium UBA956	1951375	PRJNA348753	348753	PVC group	Verrucomicrobia	3.38158	51.9	-	DBCO01	40	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451665	GCA_002293145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/145/GCA_002293145.1_ASM229314v1	28894102	-
Burkholderiales bacterium UBA954	1950782	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	1.61321	53.5	-	DBCQ01	72	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451667	GCA_002293155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/155/GCA_002293155.1_ASM229315v1	28894102	-
Flavobacteriales bacterium UBA952	1951090	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.17415	42.3	-	DBCS01	10	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451661	GCA_002293185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/185/GCA_002293185.1_ASM229318v1	28894102	-
bacterium UBA951	1947788	PRJNA348753	348753	unclassified Bacteria	unclassified Bacteria (miscellaneous)	0.688144	35.3	-	DBCT01	89	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451664	GCA_002293205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/205/GCA_002293205.1_ASM229320v1	28894102	-
Candidatus Saccharibacteria bacterium UBA949	1953380	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.811947	50.1	-	DBCV01	66	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06454453	GCA_002293245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/245/GCA_002293245.1_ASM229324v1	28894102	-
Eggerthellales bacterium UBA948	1950945	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.88952	45.5	-	DBCW01	180	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06454454	GCA_002293265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/265/GCA_002293265.1_ASM229326v1	28894102	-
Ruminococcaceae bacterium UBA945	1952449	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.67292	49.7	-	DBCZ01	96	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06454459	GCA_002293315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/315/GCA_002293315.1_ASM229331v1	28894102	-
Cyanobacteria bacterium UBA947	1947903	PRJNA348753	348753	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.47189	46.7	-	DBCX01	64	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06454461	GCA_002293275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/275/GCA_002293275.1_ASM229327v1	28894102	-
Firmicutes bacterium UBA911	1948108	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.51495	62.2	-	DBEH01	59	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453155	GCA_002294005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/005/GCA_002294005.1_ASM229400v1	28894102	-
Flavobacteriales bacterium UBA896	1951089	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.79214	35.4	-	DBEW01	142	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455065	GCA_002294105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/105/GCA_002294105.1_ASM229410v1	28894102	-
Flavobacteriaceae bacterium UBA891	1951889	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.98809	42.2	-	DBFB01	26	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455062	GCA_002294145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/145/GCA_002294145.1_ASM229414v1	28894102	-
Anaerolineales bacterium UBA877	1950227	PRJNA348753	348753	Terrabacteria group	Chloroflexi	1.44491	49.8	-	DBFP01	57	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455323	GCA_002294405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/405/GCA_002294405.1_ASM229440v1	28894102	-
Patescibacteria group bacterium UBA910	1948866	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.585086	38.5	-	DBEI01	68	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453154	GCA_002294445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/445/GCA_002294445.1_ASM229444v1	28894102	-
Enterobacteriaceae bacterium UBA898	1951726	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.48705	54.2	-	DBEU01	33	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455069	GCA_002294575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/575/GCA_002294575.1_ASM229457v1	28894102	-
Candidatus Saccharibacteria bacterium UBA892	1953379	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.637064	51	-	DBFA01	74	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455061	GCA_002294615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/615/GCA_002294615.1_ASM229461v1	28894102	-
Alteromonadaceae bacterium UBA884	1951396	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.15394	49	-	DBFI01	199	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457641	GCA_002294645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/645/GCA_002294645.1_ASM229464v1	28894102	-
Candidatus Aminicenantes bacterium UBA876	1953199	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	1.92729	56.8	-	DBFQ01	115	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455324	GCA_002294665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/665/GCA_002294665.1_ASM229466v1	28894102	-
Acidobacteria bacterium UBA890	1953114	PRJNA348753	348753	Acidobacteria	unclassified Acidobacteria	3.09148	54.5	-	DBFC01	255	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455063	GCA_002295025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/025/GCA_002295025.1_ASM229502v1	28894102	-
Gemmatimonadales bacterium UBA887	1951134	PRJNA348753	348753	FCB group	Gemmatimonadetes	2.16839	50.5	-	DBFF01	235	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457644	GCA_002295045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/045/GCA_002295045.1_ASM229504v1	28894102	-
Enterobacteriaceae bacterium UBA869	1951725	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	5.47055	53	-	DBFX01	63	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450320	GCA_002295215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/215/GCA_002295215.1_ASM229521v1	28894102	-
Proteobacteria bacterium UBA868	1948224	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	1.72564	46.5	-	DBFY01	194	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457893	GCA_002295285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/285/GCA_002295285.1_ASM229528v1	28894102	-
Ruminococcaceae bacterium UBA866	1952448	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.65433	36.4	-	DBGA01	88	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450321	GCA_002295325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/325/GCA_002295325.1_ASM229532v1	28894102	-
Sporomusaceae bacterium UBA864	1953032	PRJNA348753	348753	Terrabacteria group	Firmicutes	4.24106	44.3	-	DBGC01	80	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450323	GCA_002295335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/335/GCA_002295335.1_ASM229533v1	28894102	-
Alteromonadaceae bacterium UBA858	1951395	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.32942	48.3	-	DBGI01	195	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455558	GCA_002295415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/415/GCA_002295415.1_ASM229541v1	28894102	-
Bdellovibrionaceae bacterium UBA840	1961525	PRJNA348753	348753	Proteobacteria	Oligoflexia	3.7075	37.7	-	DBHA01	60	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450577	GCA_002295565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/565/GCA_002295565.1_ASM229556v1	28894102	-
Proteobacteria bacterium UBA841	1948223	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	1.80803	47.8	-	DBGZ01	5	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450578	GCA_002295585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/585/GCA_002295585.1_ASM229558v1	28894102	-
Pseudomonadaceae bacterium UBA839	1952796	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.00957	59.9	-	DBHB01	368	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455834	GCA_002295605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/605/GCA_002295605.1_ASM229560v1	28894102	-
Gemmatimonadales bacterium UBA829	1951133	PRJNA348753	348753	FCB group	Gemmatimonadetes	2.64311	53.9	-	DBHL01	93	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450821	GCA_002295625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/625/GCA_002295625.1_ASM229562v1	28894102	-
Alphaproteobacteria bacterium UBA830	1948451	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.00684	50.2	-	DBHK01	27	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455827	GCA_002295635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/635/GCA_002295635.1_ASM229563v1	28894102	-
bacterium UBP8_UBA827	1953446	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	1.0174	32.4	-	DBHN01	58	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450817	GCA_002295665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/665/GCA_002295665.1_ASM229566v1	28894102	-
Dehalococcoidia bacterium UBA826	1948534	PRJNA348753	348753	Terrabacteria group	Chloroflexi	1.73513	34.1	-	DBHO01	90	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450816	GCA_002295675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/675/GCA_002295675.1_ASM229567v1	28894102	-
Gemmatimonadales bacterium UBA822	1951132	PRJNA348753	348753	FCB group	Gemmatimonadetes	2.49241	60	-	DBHS01	309	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450812	GCA_002295725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/725/GCA_002295725.1_ASM229572v1	28894102	-
Phycisphaerales bacterium UBA860	1951210	PRJNA348753	348753	PVC group	Planctomycetes	5.86075	49.3	-	DBGG01	371	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450327	GCA_002295795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/795/GCA_002295795.1_ASM229579v1	28894102	-
Gammaproteobacteria bacterium UBA855	1948662	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	5.25609	54	-	DBGL01	132	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455549	GCA_002295855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/855/GCA_002295855.1_ASM229585v1	28894102	-
Phycisphaerales bacterium UBA854	1951209	PRJNA348753	348753	PVC group	Planctomycetes	2.33983	64.5	-	DBGM01	54	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455550	GCA_002295885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/885/GCA_002295885.1_ASM229588v1	28894102	-
Pseudomonadaceae bacterium UBA853	1952797	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.01578	61.2	-	DBGN01	130	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455551	GCA_002295895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/895/GCA_002295895.1_ASM229589v1	28894102	-
Flavobacteriales bacterium UBA852	1951088	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.73455	35.3	-	DBGO01	22	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455552	GCA_002295925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/925/GCA_002295925.1_ASM229592v1	28894102	-
Bacteriovoracaceae bacterium UBA845	1961500	PRJNA348753	348753	Proteobacteria	Oligoflexia	3.69987	40.1	-	DBGV01	23	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450582	GCA_002295955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/955/GCA_002295955.1_ASM229595v1	28894102	-
Bacteriovoracaceae bacterium UBA843	1961499	PRJNA348753	348753	Proteobacteria	Oligoflexia	3.91069	37.8	-	DBGX01	21	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450580	GCA_002295965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/965/GCA_002295965.1_ASM229596v1	28894102	-
Pseudomonadaceae bacterium UBA836	1952795	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.55987	60.7	-	DBHE01	275	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455833	GCA_002296055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/055/GCA_002296055.1_ASM229605v1	28894102	-
Bdellovibrionaceae bacterium UBA835	1961524	PRJNA348753	348753	Proteobacteria	Oligoflexia	3.70466	37.7	-	DBHF01	66	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455830	GCA_002296085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/085/GCA_002296085.1_ASM229608v1	28894102	-
Anaerolineales bacterium UBA832	1950226	PRJNA348753	348753	Terrabacteria group	Chloroflexi	2.01009	35.1	-	DBHI01	147	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455829	GCA_002296125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/125/GCA_002296125.1_ASM229612v1	28894102	-
Pseudomonadaceae bacterium UBA833	1952794	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.59409	60.8	-	DBHH01	92	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455828	GCA_002296115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/115/GCA_002296115.1_ASM229611v1	28894102	-
Alphaproteobacteria bacterium UBA828	1948450	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	1.60928	38.2	-	DBHM01	30	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450820	GCA_002296185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/185/GCA_002296185.1_ASM229618v1	28894102	-
Acidobacteria bacterium UBA823	1953113	PRJNA348753	348753	Acidobacteria	unclassified Acidobacteria	2.53784	58.7	-	DBHR01	117	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450813	GCA_002296225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/225/GCA_002296225.1_ASM229622v1	28894102	-
Flavobacteriaceae bacterium UBA819	1951888	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.0601	44.4	-	DBHV01	327	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456102	GCA_002296255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/255/GCA_002296255.1_ASM229625v1	28894102	-
bacterium UBP8_UBA817	1953445	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	1.53883	39	-	DBHX01	68	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456108	GCA_002296285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/285/GCA_002296285.1_ASM229628v1	28894102	-
Balneolaceae bacterium UBA813	1951520	PRJNA348753	348753	Balneolaeota	Balneolia	3.87117	42.9	-	DBIB01	32	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456104	GCA_002296305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/305/GCA_002296305.1_ASM229630v1	28894102	-
Bacillales bacterium UBA795	1950365	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.40736	40	-	DBIT01	121	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455910	GCA_002296405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/405/GCA_002296405.1_ASM229640v1	28894102	-
Oscillospiraceae bacterium UBA790	1952974	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.58541	61.3	-	DBIY01	87	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455913	GCA_002296425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/425/GCA_002296425.1_ASM229642v1	28894102	-
Bacillales bacterium UBA786	1950363	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.54725	41.6	-	DBJC01	14	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451159	GCA_002296445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/445/GCA_002296445.1_ASM229644v1	28894102	-
Bacillales bacterium UBA782	1950360	PRJNA348753	348753	Terrabacteria group	Firmicutes	0.813133	42.9	-	DBJG01	77	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451155	GCA_002296455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/455/GCA_002296455.1_ASM229645v1	28894102	-
Spirochaetales bacterium UBA781	1951287	PRJNA348753	348753	Spirochaetes	Spirochaetia	2.06401	39.3	-	DBJH01	270	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451156	GCA_002296475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/475/GCA_002296475.1_ASM229647v1	28894102	-
Alteromonadaceae bacterium UBA820	1951394	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.88238	48.8	-	DBHU01	319	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450814	GCA_002296505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/505/GCA_002296505.1_ASM229650v1	28894102	-
Clostridiaceae bacterium UBA810	1951590	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.55799	43.3	-	DBIE01	179	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456107	GCA_002296585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/585/GCA_002296585.1_ASM229658v1	28894102	-
Proteobacteria bacterium UBA799	1948222	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	3.44213	58.3	-	DBIP01	43	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455918	GCA_002296665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/665/GCA_002296665.1_ASM229666v1	28894102	-
Prevotellaceae bacterium UBA776	1952536	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.0274	51.4	-	DBJM01	73	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456208	GCA_002296805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/805/GCA_002296805.1_ASM229680v1	28894102	-
Fusobacteriia bacterium UBA816	1948579	PRJNA348753	348753	Fusobacteria	Fusobacteriia	0.637326	33.1	-	DBHY01	44	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456109	GCA_002296815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/815/GCA_002296815.1_ASM229681v1	28894102	-
Bdellovibrionaceae bacterium UBA818	1961523	PRJNA348753	348753	Proteobacteria	Oligoflexia	2.83756	44.9	-	DBHW01	142	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456103	GCA_002296845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/845/GCA_002296845.1_ASM229684v1	28894102	-
Alphaproteobacteria bacterium UBA815	1948449	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.16063	57.1	-	DBHZ01	123	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456110	GCA_002296855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/855/GCA_002296855.1_ASM229685v1	28894102	-
Chitinophagaceae bacterium UBA806	1951567	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	5.65416	43.6	-	DBII01	135	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451073	GCA_002296895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/895/GCA_002296895.1_ASM229689v1	28894102	-
Deltaproteobacteria bacterium UBA796	1948566	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	3.4907	56.6	-	DBIS01	407	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455911	GCA_002296975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/975/GCA_002296975.1_ASM229697v1	28894102	-
Cyanobacteria bacterium UBA791	1947902	PRJNA348753	348753	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.99214	31.2	-	DBIX01	84	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455914	GCA_002297005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/005/GCA_002297005.1_ASM229700v1	28894102	-
Porphyromonadaceae bacterium UBA788	1952702	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.19326	52	-	DBJA01	169	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451163	GCA_002297015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/015/GCA_002297015.1_ASM229701v1	28894102	-
Bacillales bacterium UBA784	1950362	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.52153	45.9	-	DBJE01	14	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451161	GCA_002297045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/045/GCA_002297045.1_ASM229704v1	28894102	-
Bacteroidales bacterium UBA777	1950755	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.74346	49.5	-	DBJL01	212	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456209	GCA_002297085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/085/GCA_002297085.1_ASM229708v1	28894102	-
Alphaproteobacteria bacterium UBA780	1948446	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	1.74428	56.7	-	DBJI01	144	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451157	GCA_002297115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/115/GCA_002297115.1_ASM229711v1	28894102	-
Bacillales bacterium UBA783	1950361	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.49307	45.8	-	DBJF01	23	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451154	GCA_002297105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/105/GCA_002297105.1_ASM229710v1	28894102	-
Bacteroidales bacterium UBA774	1950752	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.10552	51.5	-	DBJO01	241	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456210	GCA_002297165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/165/GCA_002297165.1_ASM229716v1	28894102	-
Bacteroidales bacterium UBA760	1950745	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.72889	46.2	-	DBKC01	49	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452389	GCA_002297225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/225/GCA_002297225.1_ASM229722v1	28894102	-
Porphyromonadaceae bacterium UBA759	1952698	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.75164	52.9	-	DBKD01	78	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456434	GCA_002297255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/255/GCA_002297255.1_ASM229725v1	28894102	-
Bacillales bacterium UBA754	1950350	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.31551	34.3	-	DBKI01	104	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456439	GCA_002297295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/295/GCA_002297295.1_ASM229729v1	28894102	-
Porphyromonadaceae bacterium UBA751	1952693	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.19597	52	-	DBKL01	135	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456436	GCA_002297345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/345/GCA_002297345.1_ASM229734v1	28894102	-
Bacteroidales bacterium UBA747	1950733	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.47369	49.3	-	DBKP01	113	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452630	GCA_002297355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/355/GCA_002297355.1_ASM229735v1	28894102	-
Bacillales bacterium UBA743	1950348	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.5592	41.6	-	DBKT01	13	-	-	9/12/17	9/15/17	Contig	University of Queensland	SAMN06452634	GCA_002297365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/365/GCA_002297365.1_ASM229736v1	28894102	-
bacterium UBA732	1947787	PRJNA348753	348753	unclassified Bacteria	unclassified Bacteria (miscellaneous)	1.19941	60.6	-	DBLE01	89	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453412	GCA_002297405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/405/GCA_002297405.1_ASM229740v1	28894102	-
Ruminococcaceae bacterium UBA737	1952446	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.51807	41.7	-	DBKZ01	98	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453417	GCA_002297415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/415/GCA_002297415.1_ASM229741v1	28894102	-
Leptospiraceae bacterium UBA726	1952206	PRJNA348753	348753	Spirochaetes	Spirochaetia	4.85168	52.8	-	DBLK01	55	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452896	GCA_002297435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/435/GCA_002297435.1_ASM229743v1	28894102	-
Flavobacteriaceae bacterium UBA724	1951873	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.18398	41	-	DBLM01	39	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452894	GCA_002297465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/465/GCA_002297465.1_ASM229746v1	28894102	-
Planctomycetaceae bacterium UBA721	1952741	PRJNA348753	348753	PVC group	Planctomycetes	4.74097	48.1	-	DBLP01	62	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452889	GCA_002297475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/475/GCA_002297475.1_ASM229747v1	28894102	-
Flavobacteriales bacterium UBA720	1951062	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.17519	40.1	-	DBLQ01	131	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452890	GCA_002297505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/505/GCA_002297505.1_ASM229750v1	28894102	-
Staphylococcaceae bacterium UBA719	1953012	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.04993	36.8	-	DBLR01	19	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451164	GCA_002297525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/525/GCA_002297525.1_ASM229752v1	28894102	-
Prevotellaceae bacterium UBA711	1952528	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.45754	53.3	-	DBLZ01	132	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453698	GCA_002297545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/545/GCA_002297545.1_ASM229754v1	28894102	-
Prevotellaceae bacterium UBA708	1952527	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.29128	46.3	-	DBMC01	23	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453161	GCA_002297595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/595/GCA_002297595.1_ASM229759v1	28894102	-
Rhodanobacteraceae bacterium UBA703	1953068	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.23553	68.4	-	DBMH01	375	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453162	GCA_002297645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/645/GCA_002297645.1_ASM229764v1	28894102	-
Holophagaceae bacterium UBA692	1951930	PRJNA348753	348753	Acidobacteria	Holophagae	3.94002	68.8	-	DBMS01	328	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452253	GCA_002297665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/665/GCA_002297665.1_ASM229766v1	28894102	-
Bacteroidales bacterium UBA763	1950746	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.69233	53.8	-	DBJZ01	144	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452390	GCA_002297685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/685/GCA_002297685.1_ASM229768v1	28894102	-
Verrucomicrobia bacterium UBA770	1948295	PRJNA348753	348753	PVC group	Verrucomicrobia	1.5507	62.2	-	DBJS01	108	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456214	GCA_002297775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/775/GCA_002297775.1_ASM229777v1	28894102	-
Bacteroidales bacterium UBA755	1950735	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.91586	48.4	-	DBKH01	110	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456440	GCA_002297815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/815/GCA_002297815.1_ASM229781v1	28894102	-
Clostridiales bacterium UBA749	1950932	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.73768	56.8	-	DBKN01	136	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452638	GCA_002297875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/875/GCA_002297875.1_ASM229787v1	28894102	-
Clostridiales bacterium UBA738	1950931	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.82943	59.7	-	DBKY01	189	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453420	GCA_002297905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/905/GCA_002297905.1_ASM229790v1	28894102	-
Bacillales bacterium UBA733	1950346	PRJNA348753	348753	Terrabacteria group	Firmicutes	0.902082	52.7	-	DBLD01	16	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453413	GCA_002297925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/925/GCA_002297925.1_ASM229792v1	28894102	-
Proteobacteria bacterium UBA729	1948212	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	1.1473	40.3	-	DBLH01	131	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452897	GCA_002297985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/985/GCA_002297985.1_ASM229798v1	28894102	-
Myxococcales bacterium UBA727	1961470	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	4.5394	51.1	-	DBLJ01	285	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452895	GCA_002298025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/025/GCA_002298025.1_ASM229802v1	28894102	-
Gammaproteobacteria bacterium UBA725	1948643	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	5.40238	54	-	DBLL01	72	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452893	GCA_002298045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/045/GCA_002298045.1_ASM229804v1	28894102	-
Prevotellaceae bacterium UBA715	1952530	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.08285	53.8	-	DBLV01	100	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453694	GCA_002298065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/065/GCA_002298065.1_ASM229806v1	28894102	-
Bacteroidales bacterium UBA714	1950727	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.13689	48.9	-	DBLW01	209	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453693	GCA_002298075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/075/GCA_002298075.1_ASM229807v1	28894102	-
Verrucomicrobia subdivision 3 bacterium UBA707	1952933	PRJNA348753	348753	PVC group	Verrucomicrobia	7.29167	59.1	-	DBMD01	317	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453166	GCA_002298105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/105/GCA_002298105.1_ASM229810v1	28894102	-
Spartobacteria bacterium UBA695	1948752	PRJNA348753	348753	PVC group	Verrucomicrobia	4.10998	60.5	-	DBMP01	30	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452254	GCA_002298145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/145/GCA_002298145.1_ASM229814v1	28894102	-
Holophagaceae bacterium UBA706	1951931	PRJNA348753	348753	Acidobacteria	Holophagae	4.10663	67.7	-	DBME01	469	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453167	GCA_002298155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/155/GCA_002298155.1_ASM229815v1	28894102	-
Desulfarculales bacterium UBA702	1961527	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	4.62676	52	-	DBMI01	119	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453163	GCA_002298165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/165/GCA_002298165.1_ASM229816v1	28894102	-
Rhodanobacteraceae bacterium UBA691	1953067	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.15167	68.4	-	DBMT01	376	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452250	GCA_002298205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/205/GCA_002298205.1_ASM229820v1	28894102	-
Solibacterales bacterium UBA690	1951244	PRJNA348753	348753	Acidobacteria	Solibacteres	6.73794	62.4	-	DBMU01	43	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452251	GCA_002298225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/225/GCA_002298225.1_ASM229822v1	28894102	-
Brucellaceae bacterium UBA688	1951529	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	4.05775	52.8	-	DBMW01	246	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457064	GCA_002298235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/235/GCA_002298235.1_ASM229823v1	28894102	-
Rhizobiales bacterium UBA683	1951227	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.04664	60.9	-	DBNB01	40	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457068	GCA_002298295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/295/GCA_002298295.1_ASM229829v1	28894102	-
Spirochaetales bacterium UBA772	1951286	PRJNA348753	348753	Spirochaetes	Spirochaetia	2.50422	35.2	-	DBJQ01	176	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456212	GCA_002298385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/385/GCA_002298385.1_ASM229838v1	28894102	-
Bacteroidales bacterium UBA769	1950749	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.00523	47	-	DBJT01	201	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452382	GCA_002298405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/405/GCA_002298405.1_ASM229840v1	28894102	-
Prevotellaceae bacterium UBA766	1952535	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.42839	47.3	-	DBJW01	91	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452387	GCA_002298425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/425/GCA_002298425.1_ASM229842v1	28894102	-
Oscillospiraceae bacterium UBA757	1952973	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.65975	60.5	-	DBKF01	177	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456442	GCA_002298485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/485/GCA_002298485.1_ASM229848v1	28894102	-
Alphaproteobacteria bacterium UBA756	1948443	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	1.75161	55.7	-	DBKG01	19	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456441	GCA_002298515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/515/GCA_002298515.1_ASM229851v1	28894102	-
Prevotellaceae bacterium UBA748	1952531	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.42692	47.3	-	DBKO01	115	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452639	GCA_002298555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/555/GCA_002298555.1_ASM229855v1	28894102	-
Bacillales bacterium UBA742	1950347	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.25734	26	-	DBKU01	52	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452635	GCA_002298615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/615/GCA_002298615.1_ASM229861v1	28894102	-
Verrucomicrobia bacterium UBA740	1948290	PRJNA348753	348753	PVC group	Verrucomicrobia	1.55314	62.5	-	DBKW01	99	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452637	GCA_002298665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/665/GCA_002298665.1_ASM229866v1	28894102	-
Clostridiales bacterium UBA735	1950930	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.05198	59.2	-	DBLB01	204	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453419	GCA_002298695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/695/GCA_002298695.1_ASM229869v1	28894102	-
Ruminococcaceae bacterium UBA736	1952445	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.24363	45.8	-	DBLA01	133	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453416	GCA_002298685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/685/GCA_002298685.1_ASM229868v1	28894102	-
Alphaproteobacteria bacterium UBA723	1948439	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.157	57.4	-	DBLN01	41	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452891	GCA_002298745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/745/GCA_002298745.1_ASM229874v1	28894102	-
Verrucomicrobia subdivision 3 bacterium UBA693	1952932	PRJNA348753	348753	PVC group	Verrucomicrobia	6.60313	59	-	DBMR01	125	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452252	GCA_002298785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/785/GCA_002298785.1_ASM229878v1	28894102	-
Enterobacteriaceae bacterium UBA717	1951714	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.20214	56.5	-	DBLT01	15	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453696	GCA_002298805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/805/GCA_002298805.1_ASM229880v1	28894102	-
Prevotellaceae bacterium UBA713	1952529	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.33654	46.3	-	DBLX01	19	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453700	GCA_002298815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/815/GCA_002298815.1_ASM229881v1	28894102	-
Anaerolineaceae bacterium UBA700	1951444	PRJNA348753	348753	Terrabacteria group	Chloroflexi	3.83275	59.2	-	DBMK01	366	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453165	GCA_002298885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/885/GCA_002298885.1_ASM229888v1	28894102	-
Rhizobiales bacterium UBA697	1951228	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.70127	69.1	-	DBMN01	372	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452256	GCA_002298965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/965/GCA_002298965.1_ASM229896v1	28894102	-
Desulfarculales bacterium UBA696	1961526	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	4.17028	53.8	-	DBMO01	77	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452257	GCA_002298995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/995/GCA_002298995.1_ASM229899v1	28894102	-
Alphaproteobacteria bacterium UBA685	1948434	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	1.73597	48.2	-	DBMZ01	186	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457074	GCA_002299005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/005/GCA_002299005.1_ASM229900v1	28894102	-
Hyphomonadaceae bacterium UBA684	1951955	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.49681	61.3	-	DBNA01	228	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457073	GCA_002299045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/045/GCA_002299045.1_ASM229904v1	28894102	-
Bdellovibrionaceae bacterium UBA680	1961520	PRJNA348753	348753	Proteobacteria	Oligoflexia	3.72939	37.6	-	DBNE01	90	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457069	GCA_002299055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/055/GCA_002299055.1_ASM229905v1	28894102	-
Cellvibrionaceae bacterium UBA677	1951542	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.59404	49.5	-	DBNH01	218	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455244	GCA_002299085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/085/GCA_002299085.1_ASM229908v1	28894102	-
Proteobacteria bacterium UBA664	1948198	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	2.37106	66.6	-	DBNU01	253	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457814	GCA_002299125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/125/GCA_002299125.1_ASM229912v1	28894102	-
Hydrogenovibrio sp. UBA653	1946607	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	1.91633	41.5	-	DBOF01	154	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455005	GCA_002299205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/205/GCA_002299205.1_ASM229920v1	28894102	-
Candidatus Saccharibacteria bacterium UBA669	1953376	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.691616	50.9	-	DBNP01	54	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457809	GCA_002299795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/795/GCA_002299795.1_ASM229979v1	28894102	-
Verrucomicrobia bacterium UBA673	1948281	PRJNA348753	348753	PVC group	Verrucomicrobia	2.18688	56.1	-	DBNL01	183	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455248	GCA_002299785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/785/GCA_002299785.1_ASM229978v1	28894102	-
Nitrospiraceae bacterium UBA665	1952981	PRJNA348753	348753	Nitrospirae	Nitrospira	2.02442	40.1	-	DBNT01	173	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457815	GCA_002299835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/835/GCA_002299835.1_ASM229983v1	28894102	-
Desulfonatronaceae bacterium UBA663	1961560	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	1.60592	56.4	-	DBNV01	132	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457813	GCA_002299865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/865/GCA_002299865.1_ASM229986v1	28894102	-
Sphingomonadales bacterium UBA656	1951260	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.05376	54.9	-	DBOC01	15	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455002	GCA_002299895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/895/GCA_002299895.1_ASM229989v1	28894102	-
Proteobacteria bacterium UBA652	1948195	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	1.89011	44.1	-	DBOG01	82	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455006	GCA_002299915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/915/GCA_002299915.1_ASM229991v1	28894102	-
Proteobacteria bacterium UBA651	1948194	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	1.77518	43.7	-	DBOH01	150	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455003	GCA_002299945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/945/GCA_002299945.1_ASM229994v1	28894102	-
Caldiserica bacterium UBA646	1953183	PRJNA348753	348753	Caldiserica	unclassified Caldiserica	1.31739	36.1	-	DBOM01	88	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457566	GCA_002299965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/965/GCA_002299965.1_ASM229996v1	28894102	-
Lactobacillaceae bacterium UBA639	1952195	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.1905	50.1	-	DBOT01	150	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455713	GCA_002299975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/975/GCA_002299975.1_ASM229997v1	28894102	-
Lachnospiraceae bacterium UBA645	1952113	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.8198	41.2	-	DBON01	148	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457569	GCA_002299995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/995/GCA_002299995.1_ASM229999v1	28894102	-
Lachnospiraceae bacterium UBA629	1952108	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.84533	46	-	DBPD01	91	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450713	GCA_002300065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/065/GCA_002300065.1_ASM230006v1	28894102	-
Brucella ovis ATCC 25840	444178	PRJNA12514	12514	Proteobacteria	Alphaproteobacteria	3.27559	57.2	chromosome I:NC_009505.1/CP000708.1; chromosome II:NC_009504.1/CP000709.1	-	2	3395	3043	5/30/07	3/30/17	Complete Genome	TIGR	SAMN02604024	GCA_000016845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/845/GCA_000016845.1_ASM1684v1	-	ATCC 25840
Corynebacterium kefirresidentii	1979527	PRJNA375758	375758	Terrabacteria group	Actinobacteria	2.62878	57.5	-	NGUZ01	472	2432	2293	5/22/17	9/19/17	Contig	SysMilk	SAMN06718488	GCA_002154655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/655/GCA_002154655.1_ASM215465v1	-	SB
Wolbachia endosymbiont of Drosophila subpulchrella	2033655	PRJNA401169	401169	Proteobacteria	Alphaproteobacteria	1.42034	35.7	-	NTHL01	106	1383	1224	9/13/17	9/15/17	Scaffold	"University of California, Davis"	SAMN07599555	GCA_002300525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/525/GCA_002300525.1_ASM230052v1	-	wSpc
Pyrobaculum calidifontis JCM 11548	410359	PRJNA18111	18111	TACK group	Crenarchaeota	2.00931	57.2	chromosome:CP000561.1	-	1	2200	2149	2/27/07	12/11/13	Complete Genome	DOE Joint Genome Institute	SAMN00623060	GCA_000015805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/805/GCA_000015805.1_ASM1580v1	-	JCM 11548
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA307277	307277	Proteobacteria	Gammaproteobacteria	5.45059	57.1955	chromosome:NZ_CP014008.1/CP014008.1; plasmid pRJF293:NZ_CP014009.1/CP014009.1	-	2	5369	5080	1/22/16	2/21/17	Complete Genome	Shanghai Ruijin Hospital Affiliated with Jiaotong University	SAMN04377969	GCA_001530015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/015/GCA_001530015.1_ASM153001v1	-	RJF293
Spartobacteria bacterium UBA967	1948753	PRJNA348753	348753	PVC group	Verrucomicrobia	2.62924	55.8	-	DBCD01	260	-	-	9/14/17	9/15/17	Scaffold	University of Queensland	SAMN06456957	GCA_002303775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/775/GCA_002303775.1_ASM230377v1	28894102	-
Planctomycetaceae bacterium UBA969	1952747	PRJNA348753	348753	PVC group	Planctomycetes	4.56554	43.8	-	DBCB01	377	-	-	9/14/17	9/15/17	Scaffold	University of Queensland	SAMN06456961	GCA_002303765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/765/GCA_002303765.1_ASM230376v1	28894102	-
Rahnella victoriana	1510570	-	-	Proteobacteria	Gammaproteobacteria	5.5633	53.5	-	MAEN01	2	5146	4955	9/14/17	9/20/17	Contig	-	SAMN05249967	GCA_002303785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/785/GCA_002303785.1_ASM230378v1	-	BRK18a
Pedosphaera sp. Tous-C6FEB	1982324	PRJNA342151	342151	PVC group	Verrucomicrobia	5.68799	64.6	-	NEUT01	249	4595	4489	9/8/17	9/8/17	Contig	Universidad Miguel Hernandez	SAMN06820754	GCA_002304325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/325/GCA_002304325.1_ASM230432v1	-	-
Verrucomicrobia bacterium Tous-C9LFEB	1982333	PRJNA342151	342151	PVC group	Verrucomicrobia	4.28337	57.3	-	NEUU01	36	3607	3538	9/8/17	9/8/17	Contig	Universidad Miguel Hernandez	SAMN06820753	GCA_002304345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/345/GCA_002304345.1_ASM230434v1	-	-
Spartobacteria bacterium Tous-C9RFEB	1982327	PRJNA342151	342151	PVC group	Verrucomicrobia	0.916463	54.1	-	NEUV01	49	903	881	9/8/17	9/8/17	Contig	Universidad Miguel Hernandez	SAMN06820752	GCA_002304385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/385/GCA_002304385.1_ASM230438v1	-	-
Verrucomicrobiae bacterium Tous-C4TDCM	1982332	PRJNA342151	342151	PVC group	Verrucomicrobia	4.2815	63.9	-	NEUO01	206	3618	3533	9/8/17	9/8/17	Contig	Universidad Miguel Hernandez	SAMN06820759	GCA_002304315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/315/GCA_002304315.1_ASM230431v1	-	-
Verrucomicrobiae bacterium Tous-C5FEB	1982331	PRJNA342151	342151	PVC group	Verrucomicrobia	1.7709	57.9	-	NEUW01	98	1753	1704	9/8/17	9/8/17	Contig	Universidad Miguel Hernandez	SAMN06820751	GCA_002304355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/355/GCA_002304355.1_ASM230435v1	-	-
Opitutae bacterium Tous-C8FEB	1982323	PRJNA342151	342151	PVC group	Verrucomicrobia	2.17206	70	-	NEUZ01	96	1799	1755	9/8/17	9/8/17	Contig	Universidad Miguel Hernandez	SAMN06820748	GCA_002304435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/435/GCA_002304435.1_ASM230443v1	-	-
Opitutae bacterium Tous-C2FEB	1982320	PRJNA342151	342151	PVC group	Verrucomicrobia	1.32781	64.7	-	NEUX01	63	1226	1188	9/8/17	9/8/17	Contig	Universidad Miguel Hernandez	SAMN06820750	GCA_002304375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/375/GCA_002304375.1_ASM230437v1	-	-
Opitutae bacterium Tous-C10FEB	1982318	PRJNA342151	342151	PVC group	Verrucomicrobia	1.42048	56.8	-	NEUY01	71	1318	1282	9/8/17	9/8/17	Contig	Universidad Miguel Hernandez	SAMN06820749	GCA_002304425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/425/GCA_002304425.1_ASM230442v1	-	-
Opitutae bacterium Tous-C4FEB	1982321	PRJNA342151	342151	PVC group	Verrucomicrobia	3.76046	62.8	-	NEVA01	39	3170	3089	9/8/17	9/8/17	Contig	Universidad Miguel Hernandez	SAMN06820747	GCA_002304445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/445/GCA_002304445.1_ASM230444v1	-	-
Rhizobiales bacterium 32-66-11	1970549	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	5.32866	66.3	-	NCEH01	241	4988	4696	8/16/17	8/16/17	Scaffold	None	SAMN06622351	GCA_002304505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/505/GCA_002304505.1_ASM230450v1	-	-
Rhodospirillales bacterium 35-44-4	1970568	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	0.113433	44	-	NCEX01	78	132	128	8/16/17	8/16/17	Scaffold	None	SAMN06622335	GCA_002304495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/495/GCA_002304495.1_ASM230449v1	-	-
Candidatus Saccharibacteria bacterium UBA1021	1953311	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.798184	50.1	-	DBAB01	50	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453560	GCA_002304675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/675/GCA_002304675.1_ASM230467v1	28894102	-
Candidatus Saccharibacteria bacterium UBA1022	1953312	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.813567	48.9	-	DBAA01	58	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453566	GCA_002304695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/695/GCA_002304695.1_ASM230469v1	28894102	-
Clostridiaceae bacterium UBA1023	1951569	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.31452	31.3	-	DAZZ01	133	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457563	GCA_002304705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/705/GCA_002304705.1_ASM230470v1	28894102	-
Ruminococcaceae bacterium UBA794	1952447	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.87119	49	-	DBIU01	116	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455909	GCA_002304735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/735/GCA_002304735.1_ASM230473v1	28894102	-
Porphyromonadaceae bacterium UBA771	1952699	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.70277	52.9	-	DBJR01	95	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456215	GCA_002304755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/755/GCA_002304755.1_ASM230475v1	28894102	-
Flavobacteriaceae bacterium UBA893	1951890	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.3282	40.1	-	DBEZ01	204	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455060	GCA_002304765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/765/GCA_002304765.1_ASM230476v1	28894102	-
Firmicutes bacterium UBA1422	1947935	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.45589	42.4	-	DBPK01	30	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06456898	GCA_002304835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/835/GCA_002304835.1_ASM230483v1	28894102	-
Bacillales bacterium UBA1423	1950241	PRJNA348753	348753	Terrabacteria group	Firmicutes	0.408231	29.4	-	DBPJ01	19	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06456899	GCA_002304855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/855/GCA_002304855.1_ASM230485v1	28894102	-
Candidatus Shapirobacteria bacterium UBA1420	1953381	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.513459	38.4	-	DBPM01	53	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06456896	GCA_002304845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/845/GCA_002304845.1_ASM230484v1	28894102	-
Verrucomicrobia bacterium UBA1418	1948238	PRJNA348753	348753	PVC group	Verrucomicrobia	2.10853	59.7	-	DBPO01	134	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452101	GCA_002304915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/915/GCA_002304915.1_ASM230491v1	28894102	-
Prolixibacteraceae bacterium UBA1413	1952945	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.37831	49.8	-	DBPT01	32	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06451395	GCA_002304925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/925/GCA_002304925.1_ASM230492v1	28894102	-
Actinobacteria bacterium UBA1414	1953116	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.70922	34.8	-	DBPS01	58	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452089	GCA_002304935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/935/GCA_002304935.1_ASM230493v1	28894102	-
Actinomycetales bacterium UBA1416	1950186	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.97942	70.8	-	DBPQ01	157	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452091	GCA_002304945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/945/GCA_002304945.1_ASM230494v1	28894102	-
Syntrophaceae bacterium UBA1411	1961418	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	3.42325	57.8	-	DBPV01	148	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452092	GCA_002304995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/995/GCA_002304995.1_ASM230499v1	28894102	-
Bacteroidales bacterium UBA1410	1950409	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.19806	41	-	DBPW01	48	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452093	GCA_002305015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/015/GCA_002305015.1_ASM230501v1	28894102	-
Bacteroidales bacterium UBA1402	1950408	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.65033	46	-	DBQE01	26	-	-	9/15/17	9/18/17	Contig	University of Queensland	SAMN06457162	GCA_002305085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/085/GCA_002305085.1_ASM230508v1	28894102	-
Ruminococcaceae bacterium UBA1404	1952281	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.7342	57.3	-	DBQC01	26	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06450959	GCA_002305075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/075/GCA_002305075.1_ASM230507v1	28894102	-
candidate division WWE3 bacterium UBA1401	1953407	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.846488	40.3	-	DBQF01	6	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06457165	GCA_002305115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/115/GCA_002305115.1_ASM230511v1	28894102	-
Patescibacteria group bacterium UBA1400	1948773	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	1.02761	36.7	-	DBQG01	52	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06457164	GCA_002305125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/125/GCA_002305125.1_ASM230512v1	28894102	-
Clostridiales bacterium UBA1399	1950823	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.5972	49.1	-	DBQH01	151	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452368	GCA_002305155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/155/GCA_002305155.1_ASM230515v1	28894102	-
Armatimonadetes bacterium UBA1398	1953131	PRJNA348753	348753	Terrabacteria group	Armatimonadetes	4.128	66.8	-	DBQI01	66	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452367	GCA_002305165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/165/GCA_002305165.1_ASM230516v1	28894102	-
candidate division WWE3 bacterium UBA1397	1953406	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.7282	34.1	-	DBQJ01	27	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452364	GCA_002305205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/205/GCA_002305205.1_ASM230520v1	28894102	-
Patescibacteria group bacterium UBA1396	1948772	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.66628	40.2	-	DBQK01	12	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452363	GCA_002305195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/195/GCA_002305195.1_ASM230519v1	28894102	-
Firmicutes bacterium UBA1393	1947934	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.25372	60.9	-	DBQN01	99	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452360	GCA_002305255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/255/GCA_002305255.1_ASM230525v1	28894102	-
Prevotellaceae bacterium UBA1391	1952452	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.57052	60.1	-	DBQP01	22	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452362	GCA_002305265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/265/GCA_002305265.1_ASM230526v1	28894102	-
Bacteroidales bacterium UBA1392	1950407	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.88829	44.2	-	DBQO01	48	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452359	GCA_002305275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/275/GCA_002305275.1_ASM230527v1	28894102	-
Clostridiales bacterium UBA1390	1950822	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.81765	49.5	-	DBQQ01	61	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452361	GCA_002305315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/315/GCA_002305315.1_ASM230531v1	28894102	-
Clostridiales bacterium UBA1389	1950821	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.83341	47.2	-	DBQR01	56	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06456176	GCA_002305335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/335/GCA_002305335.1_ASM230533v1	28894102	-
Patescibacteria group bacterium UBA1388	1948771	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.938716	40.6	-	DBQS01	38	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06456177	GCA_002305355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/355/GCA_002305355.1_ASM230535v1	28894102	-
Clostridiales bacterium UBA1248	1950813	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.18533	49.2	-	DBWC01	142	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06455233	GCA_002308615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/615/GCA_002308615.1_ASM230861v1	28894102	-
Ruminococcaceae bacterium UBA1244	1952278	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.27882	44.7	-	DBWG01	166	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06455240	GCA_002308635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/635/GCA_002308635.1_ASM230863v1	28894102	-
Alphaproteobacteria bacterium UBA1271	1948355	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	1.93513	55	-	DBVF01	171	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06454521	GCA_002308655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/655/GCA_002308655.1_ASM230865v1	28894102	-
Balneolaceae bacterium UBA1275	1951483	PRJNA348753	348753	Balneolaeota	Balneolia	1.63903	40.3	-	DBVB01	133	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06456905	GCA_002308665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/665/GCA_002308665.1_ASM230866v1	28894102	-
Flavobacteriales bacterium UBA1288	1950949	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.96327	36.4	-	DBUO01	44	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06455756	GCA_002308695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/695/GCA_002308695.1_ASM230869v1	28894102	-
Opitutae bacterium UBA1274	1948704	PRJNA348753	348753	PVC group	Verrucomicrobia	1.29679	36.9	-	DBVC01	104	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06456907	GCA_002308715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/715/GCA_002308715.1_ASM230871v1	28894102	-
Opitutae bacterium UBA1276	1948705	PRJNA348753	348753	PVC group	Verrucomicrobia	2.57043	42.6	-	DBVA01	225	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06450512	GCA_002308735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/735/GCA_002308735.1_ASM230873v1	28894102	-
Bacteroidales bacterium UBA1253	1950402	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.92617	52.1	-	DBVX01	104	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457800	GCA_002308815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/815/GCA_002308815.1_ASM230881v1	28894102	-
Proteobacteria bacterium UBA1270	1948132	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	2.59072	53.9	-	DBVG01	335	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06456931	GCA_002308855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/855/GCA_002308855.1_ASM230885v1	28894102	-
Gammaproteobacteria bacterium UBA1249	1948583	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	1.5813	44.1	-	DBWB01	133	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06455234	GCA_002308895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/895/GCA_002308895.1_ASM230889v1	28894102	-
Bacteroidales bacterium UBA1237	1950401	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.34439	50	-	DBWN01	292	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06454619	GCA_002308935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/935/GCA_002308935.1_ASM230893v1	28894102	-
Clostridiales bacterium UBA1239	1950811	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.33208	45.4	-	DBWL01	149	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457554	GCA_002308975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/975/GCA_002308975.1_ASM230897v1	28894102	-
Clostridiales bacterium UBA1234	1950810	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.47987	35.5	-	DBWQ01	28	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457551	GCA_002308995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/995/GCA_002308995.1_ASM230899v1	28894102	-
Myxococcales bacterium UBA1238	1961460	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	4.19256	55.9	-	DBWM01	72	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457555	GCA_002309015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/015/GCA_002309015.1_ASM230901v1	28894102	-
Bacillales bacterium UBA1231	1950237	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.46129	30	-	DBWT01	87	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457546	GCA_002309035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/035/GCA_002309035.1_ASM230903v1	28894102	-
Ruminococcaceae bacterium UBA1236	1952277	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.71786	49.5	-	DBWO01	55	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06454620	GCA_002309055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/055/GCA_002309055.1_ASM230905v1	28894102	-
Candidatus Saccharibacteria bacterium UBA1235	1953315	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.610597	40.8	-	DBWP01	18	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457550	GCA_002309075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/075/GCA_002309075.1_ASM230907v1	28894102	-
bacterium UBA1228	1947790	PRJNA348753	348753	unclassified Bacteria	unclassified Bacteria (miscellaneous)	1.87247	55.1	-	DBWW01	213	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06454987	GCA_002309095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/095/GCA_002309095.1_ASM230909v1	28894102	-
Bacteroidales bacterium UBA1232	1950400	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.69428	47.8	-	DBWS01	148	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457549	GCA_002309115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/115/GCA_002309115.1_ASM230911v1	28894102	-
Bacteroidales bacterium UBA1229	1950399	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.71761	40.9	-	DBWV01	77	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06454988	GCA_002309135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/135/GCA_002309135.1_ASM230913v1	28894102	-
Bacteroidales bacterium UBA1223	1950398	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.9315	48	-	DBXB01	80	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06454994	GCA_002309155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/155/GCA_002309155.1_ASM230915v1	28894102	-
Ruminococcaceae bacterium UBA1227	1952276	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.0238	50.8	-	DBWX01	19	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06454990	GCA_002309175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/175/GCA_002309175.1_ASM230917v1	28894102	-
Alphaproteobacteria bacterium UBA1218	1948353	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	0.826212	37.7	-	DBXG01	44	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457308	GCA_002309215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/215/GCA_002309215.1_ASM230921v1	28894102	-
Bacteroidales bacterium UBA1216	1950395	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.23006	51.9	-	DBXI01	76	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457296	GCA_002309255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/255/GCA_002309255.1_ASM230925v1	28894102	-
Ruminococcaceae bacterium UBA1213	1952275	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.32759	39.6	-	DBXL01	236	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06452746	GCA_002309275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/275/GCA_002309275.1_ASM230927v1	28894102	-
Bacteroidales bacterium UBA1219	1950397	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.61103	48.3	-	DBXF01	95	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457307	GCA_002309295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/295/GCA_002309295.1_ASM230929v1	28894102	-
Bacteroidales bacterium UBA1217	1950396	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.06275	47.7	-	DBXH01	62	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457295	GCA_002309335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/335/GCA_002309335.1_ASM230933v1	28894102	-
Oscillospiraceae bacterium UBA1230	1952966	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.3685	58.6	-	DBWU01	86	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457547	GCA_002309395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/395/GCA_002309395.1_ASM230939v1	28894102	-
Dehalococcoidia bacterium UBA1222	1948473	PRJNA348753	348753	Terrabacteria group	Chloroflexi	0.85016	46.1	-	DBXC01	10	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06454993	GCA_002309415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/415/GCA_002309415.1_ASM230941v1	28894102	-
Cyanobacteria bacterium UBA1221	1947873	PRJNA348753	348753	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.2255	35.7	-	DBXD01	96	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06454996	GCA_002309425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/425/GCA_002309425.1_ASM230942v1	28894102	-
Succinivibrionaceae bacterium UBA1220	1953082	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	1.38023	44.1	-	DBXE01	114	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06455353	GCA_002309455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/455/GCA_002309455.1_ASM230945v1	28894102	-
Bacteroidales bacterium UBA1215	1950394	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.68101	36.9	-	DBXJ01	98	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457297	GCA_002309475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/475/GCA_002309475.1_ASM230947v1	28894102	-
Rhodobiaceae bacterium UBA1277	1952819	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	1.77247	45	-	DBUZ01	227	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06456920	GCA_002309495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/495/GCA_002309495.1_ASM230949v1	28894102	-
bacterium UBP6_UBA1209	1953438	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	2.00731	49.7	-	DBXP01	55	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06454758	GCA_002309575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/575/GCA_002309575.1_ASM230957v1	28894102	-
Verrucomicrobia bacterium UBA1211	1948233	PRJNA348753	348753	PVC group	Verrucomicrobia	3.78198	60.7	-	DBXN01	181	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457025	GCA_002309585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/585/GCA_002309585.1_ASM230958v1	28894102	-
Bacteroidales bacterium UBA1205	1950392	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.31082	38.6	-	DBXT01	82	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06454748	GCA_002309615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/615/GCA_002309615.1_ASM230961v1	28894102	-
Lachnospiraceae bacterium UBA1201	1951972	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.44268	51.2	-	DBXX01	117	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06454752	GCA_002309675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/675/GCA_002309675.1_ASM230967v1	28894102	-
Myxococcales bacterium UBA1203	1961459	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.92453	60.5	-	DBXV01	26	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06454754	GCA_002309695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/695/GCA_002309695.1_ASM230969v1	28894102	-
Elusimicrobia bacterium UBA1202	1947906	PRJNA348753	348753	Elusimicrobia	unclassified Elusimicrobia	1.38004	45.4	-	DBXW01	12	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06451543	GCA_002309715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/715/GCA_002309715.1_ASM230971v1	28894102	-
Verrucomicrobia bacterium UBA1200	1948232	PRJNA348753	348753	PVC group	Verrucomicrobia	3.67331	57	-	DBXY01	67	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06451540	GCA_002309765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/765/GCA_002309765.1_ASM230976v1	28894102	-
Clostridiales bacterium UBA1194	1950808	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.23005	55.8	-	DBYE01	142	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06456567	GCA_002309755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/755/GCA_002309755.1_ASM230975v1	28894102	-
Bacteroidales bacterium UBA1199	1950390	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.3016	58	-	DBXZ01	64	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06456577	GCA_002309795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/795/GCA_002309795.1_ASM230979v1	28894102	-
Bacteroidales bacterium UBA1189	1950386	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.19777	53.2	-	DBYJ01	61	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06452498	GCA_002309805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/805/GCA_002309805.1_ASM230980v1	28894102	-
Bacteroidales bacterium UBA1187	1950385	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.7256	49.6	-	DBYL01	45	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06452489	GCA_002309835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/835/GCA_002309835.1_ASM230983v1	28894102	-
Bacteroidales bacterium UBA1195	1950388	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.34103	51.1	-	DBYD01	68	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06456568	GCA_002309855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/855/GCA_002309855.1_ASM230985v1	28894102	-
Verrucomicrobia bacterium UBA1183	1948231	PRJNA348753	348753	PVC group	Verrucomicrobia	1.05866	41.5	-	DBYP01	24	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06452493	GCA_002309885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/885/GCA_002309885.1_ASM230988v1	28894102	-
Cyanobacteria bacterium UBA1186	1947872	PRJNA348753	348753	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.61177	38.3	-	DBYM01	78	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06452490	GCA_002309875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/875/GCA_002309875.1_ASM230987v1	28894102	-
Bacteroidales bacterium UBA1179	1950380	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.84796	49.9	-	DBYT01	146	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457414	GCA_002309915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/915/GCA_002309915.1_ASM230991v1	28894102	-
Bacteroidales bacterium UBA1178	1950379	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.48818	46.4	-	DBYU01	135	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457413	GCA_002309935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/935/GCA_002309935.1_ASM230993v1	28894102	-
Bacteroidales bacterium UBA1208	1950393	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.71294	49.2	-	DBXQ01	134	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06454757	GCA_002309955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/955/GCA_002309955.1_ASM230995v1	28894102	-
Ruminococcaceae bacterium UBA1207	1952274	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.63316	56.6	-	DBXR01	182	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06456443	GCA_002309975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/975/GCA_002309975.1_ASM230997v1	28894102	-
Bacteroidales bacterium UBA1197	1950389	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.10034	56	-	DBYB01	67	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06456570	GCA_002309995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/995/GCA_002309995.1_ASM230999v1	28894102	-
Bacteroidales bacterium UBA1182	1950383	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.54355	46.9	-	DBYQ01	94	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06452494	GCA_002310015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/015/GCA_002310015.1_ASM231001v1	28894102	-
bacterium UBP6_UBA1196	1953437	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	1.9201	45.6	-	DBYC01	91	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06456569	GCA_002310035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/035/GCA_002310035.1_ASM231003v1	28894102	-
Clostridiales bacterium UBA1206	1950809	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.93042	53.8	-	DBXS01	35	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06454749	GCA_002310055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/055/GCA_002310055.1_ASM231005v1	28894102	-
Bacteroidales bacterium UBA1204	1950391	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.30199	48.2	-	DBXU01	188	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06454747	GCA_002310075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/075/GCA_002310075.1_ASM231007v1	28894102	-
Firmicutes bacterium UBA1191	1947933	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.44759	52.3	-	DBYH01	26	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06456572	GCA_002310095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/095/GCA_002310095.1_ASM231009v1	28894102	-
Bacillales bacterium UBA1188	1950236	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.13169	29.2	-	DBYK01	7	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06452499	GCA_002310135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/135/GCA_002310135.1_ASM231013v1	28894102	-
Bacteroidales bacterium UBA1192	1950387	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.14947	47.3	-	DBYG01	87	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06456573	GCA_002310175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/175/GCA_002310175.1_ASM231017v1	28894102	-
Bacteroidales bacterium UBA1180	1950381	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.9636	52.2	-	DBYS01	23	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06452496	GCA_002310195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/195/GCA_002310195.1_ASM231019v1	28894102	-
Bacteroidales bacterium UBA1181	1950382	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.42371	48.1	-	DBYR01	42	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06452495	GCA_002310215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/215/GCA_002310215.1_ASM231021v1	28894102	-
Bacteroidales bacterium UBA1184	1950384	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.81701	42.7	-	DBYO01	53	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06452492	GCA_002310235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/235/GCA_002310235.1_ASM231023v1	28894102	-
Alphaproteobacteria bacterium UBA1185	1948352	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	0.853266	35.6	-	DBYN01	9	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06452491	GCA_002310415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/415/GCA_002310415.1_ASM231041v1	28894102	-
Klebsiella pneumoniae	573	PRJNA279655	279655	Proteobacteria	Gammaproteobacteria	5.53613	57.1901	chromosome:NZ_CP015025.1/CP015025.1; plasmid pKPN-065:NZ_CP015026.1/CP015026.1	-	2	5545	5271	6/16/16	2/21/17	Complete Genome	NHGRI	SAMN03455975	GCA_001663435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/435/GCA_001663435.1_ASM166343v1	-	Kpn223
Brucella suis ATCC 23445	470137	PRJNA20371	20371	Proteobacteria	Alphaproteobacteria	3.32461	57.1843	chromosome I:NC_010169.1/CP000911.1; chromosome II:NC_010167.1/CP000912.1	-	2	3390	3158	12/20/07	3/30/17	Complete Genome	Virginia Bioinformatics Institute (VBI)	SAMN02604298	GCA_000018905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/905/GCA_000018905.1_ASM1890v1	-	ATCC 23445
Crocinitomix algicola	1740263	PRJNA322722	322722	FCB group	Bacteroidetes/Chlorobi group	3.7193	35.4	-	LYPF02	44	3314	3232	6/10/16	4/13/17	Contig	Shandong University at Weihai	SAMN05172943	GCA_001661595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/661/595/GCA_001661595.2_ASM166159v2	-	182
Elusimicrobia bacterium UBA1174	1947905	PRJNA348753	348753	Elusimicrobia	unclassified Elusimicrobia	1.37646	36	-	DBYY01	12	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06457421	GCA_002311025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/025/GCA_002311025.1_ASM231102v1	28894102	-
bacterium UBP6_UBA1177	1953436	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	2.31196	43.8	-	DBYV01	67	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06457420	GCA_002310995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/995/GCA_002310995.1_ASM231099v1	28894102	-
Alphaproteobacteria bacterium UBA1172	1948351	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	1.93507	55.2	-	DBZA01	184	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06457415	GCA_002311005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/005/GCA_002311005.1_ASM231100v1	28894102	-
Dehalococcoidia bacterium UBA1162	1948472	PRJNA348753	348753	Terrabacteria group	Chloroflexi	2.2277	50.8	-	DBZK01	45	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06454635	GCA_002311135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/135/GCA_002311135.1_ASM231113v1	28894102	-
Candidatus Marinimicrobia bacterium UBA1150	1953215	PRJNA348753	348753	FCB group	Candidatus Marinimicrobia	2.44332	46.4	-	DBZW01	124	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06450952	GCA_002311275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/275/GCA_002311275.1_ASM231127v1	28894102	-
Dehalococcoidia bacterium UBA1152	1948471	PRJNA348753	348753	Terrabacteria group	Chloroflexi	1.58201	39.4	-	DBZU01	74	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06450954	GCA_002311285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/285/GCA_002311285.1_ASM231128v1	28894102	-
Methylococcaceae bacterium UBA1147	1952219	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.13371	52.4	-	DBZZ01	88	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06457734	GCA_002311315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/315/GCA_002311315.1_ASM231131v1	28894102	-
Planctomycetes bacterium UBA1146	1948125	PRJNA348753	348753	PVC group	Planctomycetes	2.97608	56.8	-	DCAA01	47	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06457794	GCA_002311345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/345/GCA_002311345.1_ASM231134v1	28894102	-
bacterium UBP10_UBA1149	1953411	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	2.60938	63.2	-	DBZX01	101	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06452098	GCA_002311335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/335/GCA_002311335.1_ASM231133v1	28894102	-
bacterium UBA1143	1947789	PRJNA348753	348753	unclassified Bacteria	unclassified Bacteria (miscellaneous)	0.662623	25.9	-	DCAC01	47	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06452088	GCA_002311375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/375/GCA_002311375.1_ASM231137v1	28894102	-
Candidatus Marinimicrobia bacterium UBA1139	1953214	PRJNA348753	348753	FCB group	Candidatus Marinimicrobia	1.29607	42	-	DCAG01	127	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06456919	GCA_002311395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/395/GCA_002311395.1_ASM231139v1	28894102	-
Dehalococcoidia bacterium UBA1141	1948469	PRJNA348753	348753	Terrabacteria group	Chloroflexi	3.76684	54.2	-	DCAE01	155	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06452090	GCA_002311385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/385/GCA_002311385.1_ASM231138v1	28894102	-
Gemmatimonadales bacterium UBA1138	1951101	PRJNA348753	348753	FCB group	Gemmatimonadetes	4.28734	63.1	-	DCAH01	133	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06456918	GCA_002311435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/435/GCA_002311435.1_ASM231143v1	28894102	-
Anaerolineales bacterium UBA1136	1950187	PRJNA348753	348753	Terrabacteria group	Chloroflexi	2.01869	41.6	-	DCAJ01	126	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06457037	GCA_002311455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/455/GCA_002311455.1_ASM231145v1	28894102	-
Rhodospirillaceae bacterium UBA1137	1952848	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.12355	54.5	-	DCAI01	186	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06457038	GCA_002311465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/465/GCA_002311465.1_ASM231146v1	28894102	-
Dehalococcoidia bacterium UBA1127	1948468	PRJNA348753	348753	Terrabacteria group	Chloroflexi	1.85913	55.9	-	DCAS01	188	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06451862	GCA_002311595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/595/GCA_002311595.1_ASM231159v1	28894102	-
Flavobacteriales bacterium UBA1128	1950947	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.34061	37.6	-	DCAR01	255	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06451853	GCA_002311605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/605/GCA_002311605.1_ASM231160v1	28894102	-
Syntrophaceae bacterium UBA1163	1961416	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	4.08491	48.3	-	DBZJ01	248	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06454634	GCA_002311635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/635/GCA_002311635.1_ASM231163v1	28894102	-
Bacteroidales bacterium UBA1176	1950378	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.65608	51.2	-	DBYW01	58	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06457419	GCA_002311645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/645/GCA_002311645.1_ASM231164v1	28894102	-
Bacteroidales bacterium UBA1173	1950377	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.39557	44.4	-	DBYZ01	19	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06457416	GCA_002311655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/655/GCA_002311655.1_ASM231165v1	28894102	-
Flavobacteriales bacterium UBA1167	1950948	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.40465	44.8	-	DBZF01	23	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06452728	GCA_002311725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/725/GCA_002311725.1_ASM231172v1	28894102	-
Phycisphaerales bacterium UBA1161	1951183	PRJNA348753	348753	PVC group	Planctomycetes	2.93217	62.7	-	DBZL01	79	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06454632	GCA_002311745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/745/GCA_002311745.1_ASM231174v1	28894102	-
bacterium UBP10_UBA1160	1953412	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	3.66694	61.3	-	DBZM01	47	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06454633	GCA_002311805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/805/GCA_002311805.1_ASM231180v1	28894102	-
Proteobacteria bacterium UBA1148	1948131	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	2.63089	49.8	-	DBZY01	117	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06452099	GCA_002311835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/835/GCA_002311835.1_ASM231183v1	28894102	-
Candidatus Dadabacteria bacterium UBA1144	1953208	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	1.05777	33.2	-	DCAB01	22	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06452095	GCA_002311855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/855/GCA_002311855.1_ASM231185v1	28894102	-
Dehalococcoidia bacterium UBA1151	1948470	PRJNA348753	348753	Terrabacteria group	Chloroflexi	3.04405	56.1	-	DBZV01	223	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06457163	GCA_002311865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/865/GCA_002311865.1_ASM231186v1	28894102	-
Gemmatimonadales bacterium UBA1142	1951102	PRJNA348753	348753	FCB group	Gemmatimonadetes	2.70451	55.3	-	DCAD01	63	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06457782	GCA_002311875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/875/GCA_002311875.1_ASM231187v1	28894102	-
Planctomycetes bacterium UBA1135	1948124	PRJNA348753	348753	PVC group	Planctomycetes	2.03581	61	-	DCAK01	125	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06457040	GCA_002311925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/925/GCA_002311925.1_ASM231192v1	28894102	-
Ruminococcaceae bacterium UBA1026	1952268	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.51554	50.7	-	DCEP01	15	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06453557	GCA_002311945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/945/GCA_002311945.1_ASM231194v1	28894102	-
Candidatus Marinimicrobia bacterium UBA1134	1953213	PRJNA348753	348753	FCB group	Candidatus Marinimicrobia	1.86389	50	-	DCAL01	117	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06456910	GCA_002311975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/975/GCA_002311975.1_ASM231197v1	28894102	-
Anaerolineaceae bacterium UBA1024	1951401	PRJNA348753	348753	Terrabacteria group	Chloroflexi	2.20668	49.3	-	DCER01	105	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06453553	GCA_002311995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/995/GCA_002311995.1_ASM231199v1	28894102	-
Atopobiaceae bacterium UBA1025	1951451	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.00942	51.9	-	DCEQ01	37	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06457497	GCA_002312035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/035/GCA_002312035.1_ASM231203v1	28894102	-
Agaribacterium haliotis	2013869	PRJNA392662	392662	Proteobacteria	Gammaproteobacteria	4.17385	50.5	-	NKQJ01	32	3640	3553	9/19/17	9/21/17	Contig	"Third Institute of Oceanography, SOA"	SAMN07303802	GCA_002312815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/815/GCA_002312815.1_ASM231281v1	28901895	feces2
Syntrophaceae bacterium UBA1164	1961417	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.84018	43.3	-	DBZI01	240	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06452726	GCA_002312915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/915/GCA_002312915.1_ASM231291v1	28894102	-
Oceanospirillaceae bacterium UBA1126	1952987	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.43896	44.1	-	DCAT01	200	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06451863	GCA_002312935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/935/GCA_002312935.1_ASM231293v1	28894102	-
Brucella suis bv. 2	645170	PRJNA242287	242287	Proteobacteria	Alphaproteobacteria	3.32897	57.1842	chromosome I:NZ_CP007697.1/CP007697.1; chromosome II:NZ_CP007698.1/CP007698.1	-	2	3392	3163	6/5/14	4/2/17	Complete Genome	"National Institute for Agrarian and Veterinary Research, P.I. & BioFIG - Center for Biodiversity Functional & Integrative Genomics Faculty of Sciences"	SAMN02692306	GCA_000698325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/325/GCA_000698325.1_ASM69832v1	-	Bs364CITA
Frankia asymbiotica	1834516	PRJNA318441	318441	Terrabacteria group	Actinobacteria	9.43576	72	-	MOMC01	174	7811	7086	2/1/17	9/28/17	Contig	"University of Tunis El Manar, Faculty of Sciences of Tunis"	SAMN04851310	GCA_001983105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/105/GCA_001983105.1_ASM198310v1	28918775	NRRL B-16386
Gammaproteobacteria bacterium UBA1119	1948582	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.78157	52.7	-	DCBA01	139	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06454358	GCA_002313255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/255/GCA_002313255.1_ASM231325v1	28894102	-
Dehalococcoidia bacterium UBA1122	1948466	PRJNA348753	348753	Terrabacteria group	Chloroflexi	2.16545	55.5	-	DCAX01	225	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06451859	GCA_002313245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/245/GCA_002313245.1_ASM231324v1	28894102	-
Gemmatimonadales bacterium UBA1125	1951100	PRJNA348753	348753	FCB group	Gemmatimonadetes	1.52085	60	-	DCAU01	114	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06457346	GCA_002313235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/235/GCA_002313235.1_ASM231323v1	28894102	-
Cellvibrionaceae bacterium UBA1124	1951541	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.30492	47	-	DCAV01	222	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453855	GCA_002313265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/265/GCA_002313265.1_ASM231326v1	28894102	-
Gammaproteobacteria bacterium UBA1118	1948581	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.25777	51.7	-	DCBB01	117	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06454357	GCA_002313315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/315/GCA_002313315.1_ASM231331v1	28894102	-
Flavobacteriaceae bacterium UBA1115	1951798	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.05786	40.8	-	DCBE01	64	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06454776	GCA_002313325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/325/GCA_002313325.1_ASM231332v1	28894102	-
Porticoccaceae bacterium UBA1117	1952748	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	1.91802	42.5	-	DCBC01	173	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06454364	GCA_002313335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/335/GCA_002313335.1_ASM231333v1	28894102	-
Opitutae bacterium UBA1116	1948703	PRJNA348753	348753	PVC group	Verrucomicrobia	1.94345	46.5	-	DCBD01	160	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06454363	GCA_002313355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/355/GCA_002313355.1_ASM231335v1	28894102	-
Legionellales bacterium UBA1113	1951144	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.42975	44.6	-	DCBG01	54	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06454815	GCA_002313395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/395/GCA_002313395.1_ASM231339v1	28894102	-
Flavobacteriales bacterium UBA1112	1950946	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.07248	50.1	-	DCBH01	137	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06454367	GCA_002313415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/415/GCA_002313415.1_ASM231341v1	28894102	-
Bacillales bacterium UBA1110	1950235	PRJNA348753	348753	Terrabacteria group	Firmicutes	0.88097	27.9	-	DCBJ01	75	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06454812	GCA_002313405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/405/GCA_002313405.1_ASM231340v1	28894102	-
Bacteroidales bacterium UBA1111	1950376	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.85277	50.7	-	DCBI01	228	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06454814	GCA_002313435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/435/GCA_002313435.1_ASM231343v1	28894102	-
Verrucomicrobia bacterium UBA1105	1948230	PRJNA348753	348753	PVC group	Verrucomicrobia	1.48389	62.5	-	DCBO01	101	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06455517	GCA_002313475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/475/GCA_002313475.1_ASM231347v1	28894102	-
Candidatus Saccharibacteria bacterium UBA1103	1953314	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.785679	47.2	-	DCBQ01	11	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06455519	GCA_002313515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/515/GCA_002313515.1_ASM231351v1	28894102	-
Verrucomicrobia bacterium UBA1100	1948229	PRJNA348753	348753	PVC group	Verrucomicrobia	2.81063	45.9	-	DCBT01	302	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06455522	GCA_002313555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/555/GCA_002313555.1_ASM231355v1	28894102	-
Alteromonadaceae bacterium UBA1099	1951380	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.22732	48.8	-	DCBU01	318	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06457035	GCA_002313575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/575/GCA_002313575.1_ASM231357v1	28894102	-
Verrucomicrobia bacterium UBA1096	1948228	PRJNA348753	348753	PVC group	Verrucomicrobia	3.0324	56.7	-	DCBX01	211	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06457034	GCA_002313595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/595/GCA_002313595.1_ASM231359v1	28894102	-
Fusobacteriia bacterium UBA1095	1948575	PRJNA348753	348753	Fusobacteria	Fusobacteriia	0.767976	32.8	-	DCBY01	33	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06457031	GCA_002313635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/635/GCA_002313635.1_ASM231363v1	28894102	-
Akkermansiaceae bacterium UBA1090	1951349	PRJNA348753	348753	PVC group	Verrucomicrobia	3.74617	53.7	-	DCCD01	213	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06457028	GCA_002313665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/665/GCA_002313665.1_ASM231366v1	28894102	-
bacterium UBP9_UBA1085	1953447	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	2.43091	43.4	-	DCCI01	137	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452230	GCA_002313735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/735/GCA_002313735.1_ASM231373v1	28894102	-
Bacillales bacterium UBA1083	1950233	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.5122	44.2	-	DCCK01	82	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452232	GCA_002313775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/775/GCA_002313775.1_ASM231377v1	28894102	-
Clostridiales bacterium UBA1084	1950807	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.51831	57.3	-	DCCJ01	173	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452229	GCA_002313745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/745/GCA_002313745.1_ASM231374v1	28894102	-
Ruminococcaceae bacterium UBA1081	1952272	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.66441	45	-	DCCM01	136	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452234	GCA_002313815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/815/GCA_002313815.1_ASM231381v1	28894102	-
Prevotellaceae bacterium UBA1079	1952451	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.94948	46.6	-	DCCO01	104	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06450729	GCA_002313825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/825/GCA_002313825.1_ASM231382v1	28894102	-
Bacillales bacterium UBA1078	1950232	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.11183	28	-	DCCP01	88	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06450730	GCA_002313845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/845/GCA_002313845.1_ASM231384v1	28894102	-
Dehalococcoidia bacterium UBA1123	1948467	PRJNA348753	348753	Terrabacteria group	Chloroflexi	3.39505	54.6	-	DCAW01	196	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06451858	GCA_002313895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/895/GCA_002313895.1_ASM231389v1	28894102	-
Deltaproteobacteria bacterium UBA1121	1948536	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	3.15147	55.4	-	DCAY01	335	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453842	GCA_002313905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/905/GCA_002313905.1_ASM231390v1	28894102	-
Gemmatimonadales bacterium UBA1120	1951099	PRJNA348753	348753	FCB group	Gemmatimonadetes	2.35027	52.1	-	DCAZ01	148	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06451857	GCA_002313925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/925/GCA_002313925.1_ASM231392v1	28894102	-
Methylococcaceae bacterium UBA1114	1952218	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.18782	42.6	-	DCBF01	93	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06454768	GCA_002313955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/955/GCA_002313955.1_ASM231395v1	28894102	-
Ruminococcaceae bacterium UBA1108	1952273	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.4313	41.2	-	DCBL01	116	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06455514	GCA_002313985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/985/GCA_002313985.1_ASM231398v1	28894102	-
Bacteroidales bacterium UBA1107	1950375	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.87816	46.6	-	DCBM01	76	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06455515	GCA_002314015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/015/GCA_002314015.1_ASM231401v1	28894102	-
Bacillales bacterium UBA1106	1950234	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.47899	40.2	-	DCBN01	39	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06451566	GCA_002314035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/035/GCA_002314035.1_ASM231403v1	28894102	-
Rhodobiaceae bacterium UBA1098	1952818	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.49109	62	-	DCBV01	39	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06457036	GCA_002314065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/065/GCA_002314065.1_ASM231406v1	28894102	-
Balneolaceae bacterium UBA1093	1951482	PRJNA348753	348753	Balneolaeota	Balneolia	3.87547	42.9	-	DCCA01	35	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06457029	GCA_002314115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/115/GCA_002314115.1_ASM231411v1	28894102	-
Leptospiraceae bacterium UBA1091	1952200	PRJNA348753	348753	Spirochaetes	Spirochaetia	4.85753	52.9	-	DCCC01	21	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06457027	GCA_002314135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/135/GCA_002314135.1_ASM231413v1	28894102	-
Lachnospiraceae bacterium UBA1080	1951971	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.61924	46.5	-	DCCN01	84	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452233	GCA_002314175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/175/GCA_002314175.1_ASM231417v1	28894102	-
Bacteroidales bacterium UBA1077	1950374	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.59899	50.9	-	DCCQ01	150	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06450723	GCA_002314195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/195/GCA_002314195.1_ASM231419v1	28894102	-
Alteromonadaceae bacterium UBA1089	1951379	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.30488	49.2	-	DCCE01	337	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452226	GCA_002314215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/215/GCA_002314215.1_ASM231421v1	28894102	-
Ruminococcaceae bacterium UBA1821	1952296	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.54187	47	-	DCEV01	72	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452971	GCA_002314235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/235/GCA_002314235.1_ASM231423v1	28894102	-
Flavobacteriales bacterium UBA1820	1950957	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.812	56.6	-	DCEW01	107	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452970	GCA_002314265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/265/GCA_002314265.1_ASM231426v1	28894102	-
Lachnospiraceae bacterium UBA1818	1951989	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.20555	50.4	-	DCEY01	201	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453775	GCA_002314255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/255/GCA_002314255.1_ASM231425v1	28894102	-
Ruminococcaceae bacterium UBA1816	1952295	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.63253	55.4	-	DCFA01	31	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453773	GCA_002314305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/305/GCA_002314305.1_ASM231430v1	28894102	-
Acidobacteriaceae bacterium UBA1795	1951345	PRJNA348753	348753	Acidobacteria	Acidobacteriia	3.94691	60.2	-	DCFV01	244	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453558	GCA_002314435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/435/GCA_002314435.1_ASM231443v1	28894102	-
bacterium UBA1790	1947792	PRJNA348753	348753	unclassified Bacteria	unclassified Bacteria (miscellaneous)	2.28213	50.7	-	DCGA01	198	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06454588	GCA_002314465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/465/GCA_002314465.1_ASM231446v1	28894102	-
Lentisphaeria bacterium UBA1791	1948694	PRJNA348753	348753	PVC group	Lentisphaerae	1.99173	56.4	-	DCFZ01	61	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06454594	GCA_002314455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/455/GCA_002314455.1_ASM231445v1	28894102	-
Prevotellaceae bacterium UBA1786	1952461	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.18967	46.4	-	DCGE01	240	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456002	GCA_002314525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/525/GCA_002314525.1_ASM231452v1	28894102	-
Ruminococcaceae bacterium UBA1785	1952294	PRJNA348753	348753	Terrabacteria group	Firmicutes	0.945549	40.5	-	DCGF01	114	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06455999	GCA_002314555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/555/GCA_002314555.1_ASM231455v1	28894102	-
Clostridiales bacterium UBA1779	1950838	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.38472	47.6	-	DCGL01	171	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456563	GCA_002314565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/565/GCA_002314565.1_ASM231456v1	28894102	-
Clostridiales bacterium UBA1775	1950836	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.44076	35.1	-	DCGP01	42	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456559	GCA_002314595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/595/GCA_002314595.1_ASM231459v1	28894102	-
Lentisphaeria bacterium UBA1776	1948692	PRJNA348753	348753	PVC group	Lentisphaerae	2.71882	56.5	-	DCGO01	146	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456560	GCA_002314605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/605/GCA_002314605.1_ASM231460v1	28894102	-
Clostridiales bacterium UBA1774	1950835	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.80381	56.9	-	DCGQ01	66	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456558	GCA_002314635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/635/GCA_002314635.1_ASM231463v1	28894102	-
Ruminococcaceae bacterium UBA1772	1952293	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.48136	38.6	-	DCGS01	101	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456556	GCA_002314645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/645/GCA_002314645.1_ASM231464v1	28894102	-
Clostridiales bacterium UBA1763	1950833	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.59781	49.5	-	DCHB01	86	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452458	GCA_002314685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/685/GCA_002314685.1_ASM231468v1	28894102	-
Lachnospiraceae bacterium UBA1766	1951987	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.70815	43.1	-	DCGY01	99	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452463	GCA_002314715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/715/GCA_002314715.1_ASM231471v1	28894102	-
Bacteroidales bacterium UBA1769	1950432	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.77857	40	-	DCGV01	138	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452467	GCA_002314725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/725/GCA_002314725.1_ASM231472v1	28894102	-
Lachnospiraceae bacterium UBA1760	1951986	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.55398	39.3	-	DCHE01	96	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452461	GCA_002314775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/775/GCA_002314775.1_ASM231477v1	28894102	-
Bacteroidales bacterium UBA1756	1950430	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.17481	45	-	DCHI01	84	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453549	GCA_002314795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/795/GCA_002314795.1_ASM231479v1	28894102	-
Lachnospiraceae bacterium UBA1755	1951984	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.94996	47.8	-	DCHJ01	118	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453552	GCA_002314805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/805/GCA_002314805.1_ASM231480v1	28894102	-
Clostridiales bacterium UBA1752	1950831	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.5521	49.7	-	DCHM01	49	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453545	GCA_002314835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/835/GCA_002314835.1_ASM231483v1	28894102	-
Lachnospiraceae bacterium UBA1748	1951982	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.23741	37.2	-	DCHQ01	103	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452731	GCA_002314855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/855/GCA_002314855.1_ASM231485v1	28894102	-
Prevotellaceae bacterium UBA1746	1952460	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.97298	46.8	-	DCHS01	55	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452735	GCA_002314875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/875/GCA_002314875.1_ASM231487v1	28894102	-
Bacteroidales bacterium UBA1745	1950427	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.60694	53.7	-	DCHT01	73	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452732	GCA_002314885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/885/GCA_002314885.1_ASM231488v1	28894102	-
Bacillales bacterium UBA1744	1950248	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.69302	43	-	DCHU01	82	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452733	GCA_002314915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/915/GCA_002314915.1_ASM231491v1	28894102	-
Clostridiales bacterium UBA1742	1950830	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.45656	26.1	-	DCHW01	67	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452739	GCA_002314935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/935/GCA_002314935.1_ASM231493v1	28894102	-
Prevotellaceae bacterium UBA1743	1952459	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.69129	47.1	-	DCHV01	103	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452738	GCA_002314945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/945/GCA_002314945.1_ASM231494v1	28894102	-
Veillonellaceae bacterium UBA1822	1953089	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.03811	59.3	-	DCEU01	15	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452972	GCA_002314995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/995/GCA_002314995.1_ASM231499v1	28894102	-
Candidatus Saccharibacteria bacterium UBA1788	1953318	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.583916	42.1	-	DCGC01	44	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456009	GCA_002315165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/165/GCA_002315165.1_ASM231516v1	28894102	-
Prevotellaceae bacterium UBA1787	1952462	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.84597	45.4	-	DCGD01	164	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06457771	GCA_002315195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/195/GCA_002315195.1_ASM231519v1	28894102	-
Erysipelotrichaceae bacterium UBA1783	1951742	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.09346	34.8	-	DCGH01	112	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06457767	GCA_002315205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/205/GCA_002315205.1_ASM231520v1	28894102	-
Lachnospiraceae bacterium UBA1778	1951988	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.93256	50.4	-	DCGM01	114	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456562	GCA_002315255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/255/GCA_002315255.1_ASM231525v1	28894102	-
Clostridiales bacterium UBA1777	1950837	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.77	52.9	-	DCGN01	162	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456561	GCA_002315275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/275/GCA_002315275.1_ASM231527v1	28894102	-
Firmicutes bacterium UBA1768	1947942	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.52612	42.6	-	DCGW01	94	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452468	GCA_002315335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/335/GCA_002315335.1_ASM231533v1	28894102	-
Clostridiales bacterium UBA1770	1950834	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.29003	51.9	-	DCGU01	101	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456554	GCA_002315325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/325/GCA_002315325.1_ASM231532v1	28894102	-
Firmicutes bacterium UBA1739	1947940	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.63341	41.8	-	DCHZ01	40	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456008	GCA_002315385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/385/GCA_002315385.1_ASM231538v1	28894102	-
Bacteroidales bacterium UBA1794	1950433	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.00539	38.3	-	DCFW01	41	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06455220	GCA_002315435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/435/GCA_002315435.1_ASM231543v1	28894102	-
Lentisphaeria bacterium UBA1784	1948693	PRJNA348753	348753	PVC group	Lentisphaerae	2.06022	59.6	-	DCGG01	175	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06457770	GCA_002315455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/455/GCA_002315455.1_ASM231545v1	28894102	-
Ruminococcaceae bacterium UBA1767	1952292	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.1987	40.1	-	DCGX01	84	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452462	GCA_002315505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/505/GCA_002315505.1_ASM231550v1	28894102	-
Firmicutes bacterium UBA1764	1947941	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.48151	42.6	-	DCHA01	77	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452465	GCA_002315535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/535/GCA_002315535.1_ASM231553v1	28894102	-
Lachnospiraceae bacterium UBA1759	1951985	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.09802	52.5	-	DCHF01	56	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06450340	GCA_002315555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/555/GCA_002315555.1_ASM231555v1	28894102	-
Clostridiales bacterium UBA1758	1950832	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.82429	49.7	-	DCHG01	74	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453543	GCA_002315595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/595/GCA_002315595.1_ASM231559v1	28894102	-
Bacteroidales bacterium UBA1754	1950429	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.63589	38	-	DCHK01	72	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453551	GCA_002315615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/615/GCA_002315615.1_ASM231561v1	28894102	-
Bacteroidales bacterium UBA1757	1950431	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.18287	50	-	DCHH01	140	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453550	GCA_002315625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/625/GCA_002315625.1_ASM231562v1	28894102	-
Ruminococcaceae bacterium UBA1741	1952291	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.19844	38.6	-	DCHX01	42	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452736	GCA_002315685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/685/GCA_002315685.1_ASM231568v1	28894102	-
Rikenellaceae bacterium UBA1749	1953070	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.8902	39.1	-	DCHP01	122	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452730	GCA_002315675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/675/GCA_002315675.1_ASM231567v1	28894102	-
Clostridiales bacterium UBA1740	1950829	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.22921	50.5	-	DCHY01	46	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452737	GCA_002315715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/715/GCA_002315715.1_ASM231571v1	28894102	-
Clostridiales bacterium UBA1738	1950828	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.31798	35.1	-	DCIA01	13	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456007	GCA_002315735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/735/GCA_002315735.1_ASM231573v1	28894102	-
Bacteroidales bacterium UBA1735	1950425	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.68233	46.8	-	DCID01	56	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456011	GCA_002315745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/745/GCA_002315745.1_ASM231574v1	28894102	-
Ruminococcaceae bacterium UBA1734	1952290	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.0569	37.7	-	DCIE01	80	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456010	GCA_002315765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/765/GCA_002315765.1_ASM231576v1	28894102	-
Bacteroidales bacterium UBA1733	1950424	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.11421	46.9	-	DCIF01	151	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456017	GCA_002315795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/795/GCA_002315795.1_ASM231579v1	28894102	-
Bacteroidales bacterium UBA1725	1950423	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.06255	49	-	DCIN01	96	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452004	GCA_002315815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/815/GCA_002315815.1_ASM231581v1	28894102	-
Bacteroidales bacterium UBA1736	1950426	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.06817	46.6	-	DCIC01	147	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452058	GCA_002315825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/825/GCA_002315825.1_ASM231582v1	28894102	-
Lentisphaeria bacterium UBA1732	1948691	PRJNA348753	348753	PVC group	Lentisphaerae	2.43741	49.8	-	DCIG01	84	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456016	GCA_002315855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/855/GCA_002315855.1_ASM231585v1	28894102	-
Lentisphaeria bacterium UBA1724	1948690	PRJNA348753	348753	PVC group	Lentisphaerae	2.65455	55.2	-	DCIO01	133	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06450982	GCA_002315885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/885/GCA_002315885.1_ASM231588v1	28894102	-
Verrucomicrobia bacterium UBA1727	1948241	PRJNA348753	348753	PVC group	Verrucomicrobia	2.31767	57.5	-	DCIL01	108	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06451225	GCA_002315875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/875/GCA_002315875.1_ASM231587v1	28894102	-
Bacillales bacterium UBA1737	1950247	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.0356	25.8	-	DCIB01	29	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456013	GCA_002315915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/915/GCA_002315915.1_ASM231591v1	28894102	-
Ruminococcaceae bacterium UBA1730	1952289	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.12721	42.7	-	DCII01	71	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452060	GCA_002315935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/935/GCA_002315935.1_ASM231593v1	28894102	-
Lachnospiraceae bacterium UBA1729	1951981	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.03474	40.4	-	DCIJ01	110	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06450977	GCA_002315945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/945/GCA_002315945.1_ASM231594v1	28894102	-
Clostridiales bacterium UBA1728	1950827	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.7838	58.2	-	DCIK01	43	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06450978	GCA_002315975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/975/GCA_002315975.1_ASM231597v1	28894102	-
Prevotellaceae bacterium UBA1075	1952450	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.6107	58.2	-	DCCS01	45	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06450699	GCA_002316015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/015/GCA_002316015.1_ASM231601v1	28894102	-
Bacteroidales bacterium UBA1751	1950428	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.67749	44.7	-	DCHN01	95	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453548	GCA_002315995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/995/GCA_002315995.1_ASM231599v1	28894102	-
Prevotellaceae bacterium UBA1726	1952458	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.88568	45.5	-	DCIM01	92	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452003	GCA_002316005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/005/GCA_002316005.1_ASM231600v1	28894102	-
Bacillales bacterium UBA1073	1950231	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.49811	41.6	-	DCCU01	58	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06450719	GCA_002316075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/075/GCA_002316075.1_ASM231607v1	28894102	-
Bacteroidales bacterium UBA1072	1950373	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.3783	52	-	DCCV01	93	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06450694	GCA_002316105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/105/GCA_002316105.1_ASM231610v1	28894102	-
Bacteroidales bacterium UBA1071	1950372	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.88562	46.7	-	DCCW01	32	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06450695	GCA_002316095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/095/GCA_002316095.1_ASM231609v1	28894102	-
Bacillales bacterium UBA1070	1950230	PRJNA348753	348753	Terrabacteria group	Firmicutes	0.973505	52	-	DCCX01	30	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06450722	GCA_002316135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/135/GCA_002316135.1_ASM231613v1	28894102	-
Porphyromonadaceae bacterium UBA1069	1952537	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.96429	52.7	-	DCCY01	45	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06455736	GCA_002316155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/155/GCA_002316155.1_ASM231615v1	28894102	-
Bacteroidales bacterium UBA1068	1950371	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.88856	40.9	-	DCCZ01	32	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452443	GCA_002316175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/175/GCA_002316175.1_ASM231617v1	28894102	-
Verrucomicrobia bacterium UBA1067	1948227	PRJNA348753	348753	PVC group	Verrucomicrobia	1.37614	61.7	-	DCDA01	141	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06455734	GCA_002316185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/185/GCA_002316185.1_ASM231618v1	28894102	-
Firmicutes bacterium UBA1065	1947932	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.038	39.5	-	DCDC01	216	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06455732	GCA_002316225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/225/GCA_002316225.1_ASM231622v1	28894102	-
Lachnospiraceae bacterium UBA1066	1951970	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.30626	47.5	-	DCDB01	377	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06455733	GCA_002316215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/215/GCA_002316215.1_ASM231621v1	28894102	-
Bacteroidales bacterium UBA1064	1950370	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.36525	45.2	-	DCDD01	227	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06455731	GCA_002316235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/235/GCA_002316235.1_ASM231623v1	28894102	-
candidate division WOR-3 bacterium UBA1063	1948306	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	1.44503	40.3	-	DCDE01	39	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06455730	GCA_002316275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/275/GCA_002316275.1_ASM231627v1	28894102	-
Cloacimonetes bacterium UBA1060	1947842	PRJNA348753	348753	FCB group	Candidatus Cloacimonetes	1.22987	36.7	-	DCDH01	155	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06455727	GCA_002316305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/305/GCA_002316305.1_ASM231630v1	28894102	-
Syntrophaceae bacterium UBA1062	1961415	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	3.13099	58	-	DCDF01	295	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06455729	GCA_002316295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/295/GCA_002316295.1_ASM231629v1	28894102	-
Candidatus Aminicenantes bacterium UBA1061	1953190	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	2.5103	45.7	-	DCDG01	53	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06455728	GCA_002316315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/315/GCA_002316315.1_ASM231631v1	28894102	-
Phyllobacteriaceae bacterium UBA1059	1953059	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	4.11019	61	-	DCDI01	257	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06450975	GCA_002316345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/345/GCA_002316345.1_ASM231634v1	28894102	-
Corynebacteriaceae bacterium UBA1054	1951626	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.92011	67.6	-	DCDN01	64	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06454879	GCA_002316455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/455/GCA_002316455.1_ASM231645v1	28894102	-
Candidatus Saccharibacteria bacterium UBA1050	1953313	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.928276	47.2	-	DCDR01	3	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06450984	GCA_002316545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/545/GCA_002316545.1_ASM231654v1	28894102	-
Clostridiales bacterium UBA1049	1950806	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.07976	40	-	DCDS01	142	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456006	GCA_002316535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/535/GCA_002316535.1_ASM231653v1	28894102	-
Eubacteriaceae bacterium UBA1048	1951762	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.57119	42.5	-	DCDT01	154	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456005	GCA_002316555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/555/GCA_002316555.1_ASM231655v1	28894102	-
Firmicutes bacterium UBA1047	1947931	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.93796	34.6	-	DCDU01	238	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456015	GCA_002316585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/585/GCA_002316585.1_ASM231658v1	28894102	-
Firmicutes bacterium UBA1043	1947930	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.51872	49.1	-	DCDY01	99	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452056	GCA_002316685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/685/GCA_002316685.1_ASM231668v1	28894102	-
Bacteroidales bacterium UBA1040	1950369	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.55322	43.7	-	DCEB01	164	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456012	GCA_002316735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/735/GCA_002316735.1_ASM231673v1	28894102	-
Ruminococcaceae bacterium UBA1039	1952271	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.43986	36.5	-	DCEC01	77	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456001	GCA_002316755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/755/GCA_002316755.1_ASM231675v1	28894102	-
Synergistaceae bacterium UBA1037	1952900	PRJNA348753	348753	Synergistetes	Synergistia	1.74746	50.1	-	DCEE01	64	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06454953	GCA_002316795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/795/GCA_002316795.1_ASM231679v1	28894102	-
Ruminococcaceae bacterium UBA1036	1952270	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.57217	46	-	DCEF01	24	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453975	GCA_002316805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/805/GCA_002316805.1_ASM231680v1	28894102	-
Bacteroidales bacterium UBA1035	1950368	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.89194	40	-	DCEG01	121	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06457775	GCA_002316835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/835/GCA_002316835.1_ASM231683v1	28894102	-
Ruminococcaceae bacterium UBA1033	1952269	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.06164	49.9	-	DCEI01	87	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456019	GCA_002316875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/875/GCA_002316875.1_ASM231687v1	28894102	-
Cloacimonetes bacterium UBA1032	1947841	PRJNA348753	348753	FCB group	Candidatus Cloacimonetes	2.14966	46.6	-	DCEJ01	120	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06457778	GCA_002316885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/885/GCA_002316885.1_ASM231688v1	28894102	-
Firmicutes bacterium UBA1030	1947929	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.60603	50.7	-	DCEL01	62	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456022	GCA_002316925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/925/GCA_002316925.1_ASM231692v1	28894102	-
Bacteroidales bacterium UBA1723	1950422	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.88198	41.2	-	DCIP01	239	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452005	GCA_002317115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/115/GCA_002317115.1_ASM231711v1	28894102	-
Bacteroidales bacterium UBA1715	1950420	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.53325	36.4	-	DCIX01	42	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456275	GCA_002317135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/135/GCA_002317135.1_ASM231713v1	28894102	-
Bacillales bacterium UBA1719	1950246	PRJNA348753	348753	Terrabacteria group	Firmicutes	0.861753	29.2	-	DCIT01	54	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456283	GCA_002317145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/145/GCA_002317145.1_ASM231714v1	28894102	-
Lachnospiraceae bacterium UBA1721	1951980	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.80229	40.1	-	DCIR01	98	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06450985	GCA_002317155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/155/GCA_002317155.1_ASM231715v1	28894102	-
Lachnospiraceae bacterium UBA1712	1951978	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.16922	38.1	-	DCJA01	43	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456276	GCA_002317175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/175/GCA_002317175.1_ASM231717v1	28894102	-
Bacillales bacterium UBA1709	1950245	PRJNA348753	348753	Terrabacteria group	Firmicutes	0.836904	28.2	-	DCJD01	27	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06451234	GCA_002317215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/215/GCA_002317215.1_ASM231721v1	28894102	-
Lachnospiraceae bacterium UBA1718	1951979	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.74732	41.3	-	DCIU01	155	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456282	GCA_002317245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/245/GCA_002317245.1_ASM231724v1	28894102	-
Prevotellaceae bacterium UBA1716	1952456	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.00704	43.2	-	DCIW01	269	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456272	GCA_002317225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/225/GCA_002317225.1_ASM231722v1	28894102	-
Clostridiales bacterium UBA1707	1950826	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.00614	63.7	-	DCJF01	205	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06451242	GCA_002317275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/275/GCA_002317275.1_ASM231727v1	28894102	-
Bacteroidales bacterium UBA1714	1950419	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.56762	47.1	-	DCIY01	35	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456274	GCA_002317295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/295/GCA_002317295.1_ASM231729v1	28894102	-
Bacteroidales bacterium UBA1711	1950418	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.74216	57.5	-	DCJB01	130	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456279	GCA_002317325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/325/GCA_002317325.1_ASM231732v1	28894102	-
Prevotellaceae bacterium UBA1710	1952455	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.28258	43.1	-	DCJC01	85	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456278	GCA_002317355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/355/GCA_002317355.1_ASM231735v1	28894102	-
Synergistaceae bacterium UBA1704	1952902	PRJNA348753	348753	Synergistetes	Synergistia	2.3693	59.6	-	DCJI01	40	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06451241	GCA_002317395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/395/GCA_002317395.1_ASM231739v1	28894102	-
Bacteroidales bacterium UBA1722	1950421	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.30601	50.8	-	DCIQ01	213	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452023	GCA_002317435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/435/GCA_002317435.1_ASM231743v1	28894102	-
Prevotellaceae bacterium UBA1720	1952457	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.61968	47.6	-	DCIS01	188	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453255	GCA_002317475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/475/GCA_002317475.1_ASM231747v1	28894102	-
Verrucomicrobia bacterium UBA1731	1948242	PRJNA348753	348753	PVC group	Verrucomicrobia	2.79586	63.5	-	DCIH01	138	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452061	GCA_002317575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/575/GCA_002317575.1_ASM231757v1	28894102	-
Lachnospiraceae bacterium UBA1753	1951983	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.94353	45.3	-	DCHL01	191	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453546	GCA_002317595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/595/GCA_002317595.1_ASM231759v1	28894102	-
Enterobacteriaceae bacterium UBA1805	1951654	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.439	54.1	-	DCFL01	74	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453207	GCA_002317605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/605/GCA_002317605.1_ASM231760v1	28894102	-
Thaumarchaeota archaeon	2026795	PRJNA391950	391950	TACK group	Thaumarchaeota	1.90674	31.2	-	NVWC01	37	2247	2092	9/20/17	9/20/17	Contig	University of Southern California	SAMN07568861	GCA_002317795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/795/GCA_002317795.1_ASM231779v1	-	-
Nitrosopumilales archaeon	2026768	PRJNA391950	391950	TACK group	Thaumarchaeota	1.00372	35.2	-	NVRP01	111	1318	1134	9/20/17	9/20/17	Contig	University of Southern California	SAMN07568978	GCA_002317805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/805/GCA_002317805.1_ASM231780v1	-	-
Betaproteobacteria bacterium UBA942	1948465	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	1.78161	51.4	-	DBDC01	81	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06454458	GCA_002293385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/385/GCA_002293385.1_ASM229338v1	28894102	-
Lachnospiraceae bacterium UBA938	1952191	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.81034	47	-	DBDG01	82	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451393	GCA_002293475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/475/GCA_002293475.1_ASM229347v1	28894102	-
Lachnospiraceae bacterium UBA935	1952190	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.42601	46.3	-	DBDJ01	74	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451390	GCA_002293525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/525/GCA_002293525.1_ASM229352v1	28894102	-
Bacteroidales bacterium UBA932	1950758	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.85474	46.8	-	DBDM01	219	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451387	GCA_002293585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/585/GCA_002293585.1_ASM229358v1	28894102	-
Desulfovibrionaceae bacterium UBA930	1961568	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.09999	57.9	-	DBDO01	253	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451385	GCA_002293605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/605/GCA_002293605.1_ASM229360v1	28894102	-
Betaproteobacteria bacterium UBA931	1948464	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	1.79995	51.5	-	DBDN01	93	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451386	GCA_002293615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/615/GCA_002293615.1_ASM229361v1	28894102	-
Clostridiales bacterium UBA929	1950936	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.19048	55.4	-	DBDP01	189	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06454179	GCA_002293625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/625/GCA_002293625.1_ASM229362v1	28894102	-
Patescibacteria group bacterium UBA926	1948871	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.895554	40.5	-	DBDS01	8	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06454182	GCA_002293685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/685/GCA_002293685.1_ASM229368v1	28894102	-
Candidatus Woesebacteria bacterium UBA925	1953391	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.75775	40.5	-	DBDT01	92	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06454183	GCA_002293705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/705/GCA_002293705.1_ASM229370v1	28894102	-
Patescibacteria group bacterium UBA924	1948870	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	1.12891	44.6	-	DBDU01	30	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06454184	GCA_002293725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/725/GCA_002293725.1_ASM229372v1	28894102	-
Candidatus Gottesmanbacteria bacterium UBA927	1953292	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	1.11646	44	-	DBDR01	51	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06454181	GCA_002293715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/715/GCA_002293715.1_ASM229371v1	28894102	-
Bacteriovoracaceae bacterium UBA923	1961501	PRJNA348753	348753	Proteobacteria	Oligoflexia	2.80703	48.1	-	DBDV01	58	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06454185	GCA_002293765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/765/GCA_002293765.1_ASM229376v1	28894102	-
Patescibacteria group bacterium UBA921	1948869	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.896428	40.5	-	DBDX01	8	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06454187	GCA_002293775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/775/GCA_002293775.1_ASM229377v1	28894102	-
Patescibacteria group bacterium UBA920	1948868	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.763856	40.3	-	DBDY01	76	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06454188	GCA_002293795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/795/GCA_002293795.1_ASM229379v1	28894102	-
Candidatus Magasanikbacteria bacterium UBA922	1953295	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.924587	41.4	-	DBDW01	15	-	-	9/12/17	9/15/17	Contig	University of Queensland	SAMN06454186	GCA_002293825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/825/GCA_002293825.1_ASM229382v1	28894102	-
Candidatus Falkowbacteria bacterium UBA917	1953281	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.732067	42.5	-	DBEB01	54	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453149	GCA_002293855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/855/GCA_002293855.1_ASM229385v1	28894102	-
Patescibacteria group bacterium UBA918	1948867	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.726984	51.9	-	DBEA01	19	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453157	GCA_002293845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/845/GCA_002293845.1_ASM229384v1	28894102	-
Candidatus Falkowbacteria bacterium UBA919	1953282	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.690185	43.9	-	DBDZ01	59	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453158	GCA_002293885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/885/GCA_002293885.1_ASM229388v1	28894102	-
Enterobacteriaceae bacterium UBA914	1951727	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.85795	57.2	-	DBEE01	61	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453150	GCA_002293915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/915/GCA_002293915.1_ASM229391v1	28894102	-
Actinobacteria bacterium UBA912	1953130	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.65491	59.8	-	DBEG01	166	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453152	GCA_002293965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/965/GCA_002293965.1_ASM229396v1	28894102	-
Comamonadaceae bacterium NML91-0036	2029114	PRJNA398363	398363	Proteobacteria	Betaproteobacteria	3.31001	65.3	-	NTBH01	28	2917	2801	9/10/17	9/18/17	Contig	National Microbiology Laboratory/ Public Health Agency of Canada	SAMN07511440	GCA_002288875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/875/GCA_002288875.1_ASM228887v1	-	NML91-0036
Comamonadaceae bacterium NML91-0035	2029113	PRJNA398363	398363	Proteobacteria	Betaproteobacteria	3.30824	65.3	-	NTBI01	34	2922	2799	9/10/17	9/18/17	Contig	National Microbiology Laboratory/ Public Health Agency of Canada	SAMN07511439	GCA_002288865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/865/GCA_002288865.1_ASM228886v1	-	NML91-0035
Candidatus Protochlamydia massiliensis	1444711	PRJEB6590	253382	PVC group	Chlamydiae	2.95613	42.7	-	CCJF01	5	2528	2451	7/31/14	9/19/17	Contig	URMITE	SAMEA2609911	GCA_000751535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/535/GCA_000751535.1_Protochlamydia_naeglerophila	-	-
Candidatus Frankia californiensis	1839754	PRJEB12692	325240	Terrabacteria group	Actinobacteria	5.89646	68	-	FLUV01	2738	5705	4682	7/14/16	11/2/16	Contig	CEBITEC	SAMEA3869474	GCA_900067225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/067/225/GCA_900067225.1_Dg2	-	-
Geofilum rhodophaeum	1965019	PRJNA377850	377850	FCB group	Bacteroidetes/Chlorobi group	4.14878	48.9	-	MWUJ01	84	3419	3319	6/28/17	9/19/17	Scaffold	Shandong University	SAMN06473345	GCA_002210225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/210/225/GCA_002210225.1_ASM221022v1	-	HF401
Burkholderia singularis	1503053	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	5.56143	64.3	-	LOWA01	60	4909	4632	1/21/16	9/19/17	Contig	Northern Arizona University	SAMN03449218	GCA_001523725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/725/GCA_001523725.1_ASM152372v1	-	TSV85
Sphingomonadales bacterium UBA658	1951261	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	1.96074	55.8	-	DBOA01	227	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06454998	GCA_002299195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/195/GCA_002299195.1_ASM229919v1	28894102	-
Clostridiales bacterium UBA644	1950915	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.52682	49.1	-	DBOO01	183	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457568	GCA_002299265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/265/GCA_002299265.1_ASM229926v1	28894102	-
Faecalitalea sp. UBA637	1946520	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.4207	34.3	-	DBOV01	90	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455723	GCA_002299315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/315/GCA_002299315.1_ASM229931v1	28894102	-
Candidatus Berkelbacteria bacterium UBA1384	1953273	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.647046	44	-	DBQW01	43	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06456169	GCA_002305395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/395/GCA_002305395.1_ASM230539v1	28894102	-
Actinomycetales bacterium UBA1383	1950141	PRJNA348753	348753	Terrabacteria group	Actinobacteria	3.05758	71.2	-	DBQX01	141	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06456174	GCA_002305415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/415/GCA_002305415.1_ASM230541v1	28894102	-
Clostridiales bacterium UBA1381	1950820	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.89207	47.1	-	DBQZ01	145	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06456172	GCA_002305435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/435/GCA_002305435.1_ASM230543v1	28894102	-
Clostridiales bacterium UBA1380	1950819	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.68732	57.4	-	DBRA01	73	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06456173	GCA_002305445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/445/GCA_002305445.1_ASM230544v1	28894102	-
candidate division WWE3 bacterium UBA1379	1953405	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.942601	37.3	-	DBRB01	19	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452611	GCA_002305475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/475/GCA_002305475.1_ASM230547v1	28894102	-
Desulfovibrionaceae bacterium UBA1377	1961561	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.56162	65.3	-	DBRD01	56	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452615	GCA_002305495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/495/GCA_002305495.1_ASM230549v1	28894102	-
Bacteroidales bacterium UBA1374	1950406	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.15169	48.4	-	DBRG01	23	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452612	GCA_002305545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/545/GCA_002305545.1_ASM230554v1	28894102	-
Ruminococcaceae bacterium UBA1417	1952283	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.34327	56.2	-	DBPP01	48	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06457066	GCA_002305575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/575/GCA_002305575.1_ASM230557v1	28894102	-
Eggerthellales bacterium UBA1419	1950944	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.68331	52.4	-	DBPN01	60	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452100	GCA_002305585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/585/GCA_002305585.1_ASM230558v1	28894102	-
Verrucomicrobia bacterium UBA1412	1948237	PRJNA348753	348753	PVC group	Verrucomicrobia	1.83344	51.4	-	DBPU01	123	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06457131	GCA_002305615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/615/GCA_002305615.1_ASM230561v1	28894102	-
Anaerolineaceae bacterium UBA1415	1951403	PRJNA348753	348753	Terrabacteria group	Chloroflexi	1.65187	50.3	-	DBPR01	31	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06457781	GCA_002305635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/635/GCA_002305635.1_ASM230563v1	28894102	-
Lentisphaeria bacterium UBA1407	1948689	PRJNA348753	348753	PVC group	Lentisphaerae	4.20538	52.3	-	DBPZ01	137	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06457167	GCA_002305655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/655/GCA_002305655.1_ASM230565v1	28894102	-
Patescibacteria group bacterium UBA1406	1948774	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.936345	52.4	-	DBQA01	7	-	-	9/15/17	9/18/17	Contig	University of Queensland	SAMN06457166	GCA_002305675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/675/GCA_002305675.1_ASM230567v1	28894102	-
Ruminococcaceae bacterium UBA1405	1952282	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.61264	52	-	DBQB01	71	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06450960	GCA_002305685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/685/GCA_002305685.1_ASM230568v1	28894102	-
Deltaproteobacteria bacterium UBA1386	1948537	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	3.56852	57.6	-	DBQU01	121	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06456171	GCA_002305765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/765/GCA_002305765.1_ASM230576v1	28894102	-
Ruminococcaceae bacterium UBA1375	1952280	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.50534	55.4	-	DBRF01	23	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452613	GCA_002305795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/795/GCA_002305795.1_ASM230579v1	28894102	-
Candidatus Peregrinibacteria bacterium UBA1369	1953307	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	1.13028	51.1	-	DBRL01	19	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06456409	GCA_002305925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/925/GCA_002305925.1_ASM230592v1	28894102	-
Kosmotogaceae bacterium UBA1373	1951967	PRJNA348753	348753	Thermotogae	Thermotogae	2.48346	50.3	-	DBRH01	84	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452619	GCA_002305955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/955/GCA_002305955.1_ASM230595v1	28894102	-
Atopobiaceae bacterium UBA1367	1951452	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.17853	65.5	-	DBRN01	19	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06456411	GCA_002305995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/995/GCA_002305995.1_ASM230599v1	28894102	-
Anaerolineaceae bacterium UBA1363	1951402	PRJNA348753	348753	Terrabacteria group	Chloroflexi	2.15737	50.7	-	DBRR01	49	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06456415	GCA_002306055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/055/GCA_002306055.1_ASM230605v1	28894102	-
Synergistaceae bacterium UBA1358	1952901	PRJNA348753	348753	Synergistetes	Synergistia	1.52285	52.2	-	DBRW01	78	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452917	GCA_002306075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/075/GCA_002306075.1_ASM230607v1	28894102	-
Candidatus Moranbacteria bacterium UBA1362	1953297	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.91101	40.8	-	DBRS01	24	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06456416	GCA_002306085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/085/GCA_002306085.1_ASM230608v1	28894102	-
Patescibacteria group bacterium UBA1357	1948768	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.439456	31	-	DBRX01	40	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452910	GCA_002306095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/095/GCA_002306095.1_ASM230609v1	28894102	-
Flavobacteriales bacterium UBA1354	1950952	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.55816	39.5	-	DBSA01	166	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452911	GCA_002306185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/185/GCA_002306185.1_ASM230618v1	28894102	-
Clostridiales bacterium UBA1351	1950818	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.26223	36.9	-	DBSD01	166	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452916	GCA_002306235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/235/GCA_002306235.1_ASM230623v1	28894102	-
Rhizobiales bacterium UBA1349	1951213	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	4.5694	50.4	-	DBSF01	35	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06453400	GCA_002306245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/245/GCA_002306245.1_ASM230624v1	28894102	-
Patescibacteria group bacterium UBA1372	1948770	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.675389	36.1	-	DBRI01	28	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452618	GCA_002306295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/295/GCA_002306295.1_ASM230629v1	28894102	-
Patescibacteria group bacterium UBA1370	1948769	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.822578	47.5	-	DBRK01	35	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452616	GCA_002306315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/315/GCA_002306315.1_ASM230631v1	28894102	-
Candidatus Pacebacteria bacterium UBA1364	1953304	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.759019	36	-	DBRQ01	11	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06456414	GCA_002306345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/345/GCA_002306345.1_ASM230634v1	28894102	-
Bacillales bacterium UBA1361	1950240	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.06985	35.7	-	DBRT01	42	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06456417	GCA_002306335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/335/GCA_002306335.1_ASM230633v1	28894102	-
Candidatus Falkowbacteria bacterium UBA1359	1953276	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.699865	38.7	-	DBRV01	5	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452918	GCA_002306385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/385/GCA_002306385.1_ASM230638v1	28894102	-
Rhizobiales bacterium UBA1347	1951212	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	4.824	50.4	-	DBSH01	47	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06457140	GCA_002306405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/405/GCA_002306405.1_ASM230640v1	28894102	-
Epsilonproteobacteria bacterium UBA1350	1948570	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.53094	33.4	-	DBSE01	19	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452915	GCA_002306435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/435/GCA_002306435.1_ASM230643v1	28894102	-
Clostridiales bacterium UBA1346	1950817	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.37225	37	-	DBSI01	47	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06457141	GCA_002306455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/455/GCA_002306455.1_ASM230645v1	28894102	-
Epsilonproteobacteria bacterium UBA1345	1948569	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.63739	33.2	-	DBSJ01	24	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06457138	GCA_002306465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/465/GCA_002306465.1_ASM230646v1	28894102	-
Epsilonproteobacteria bacterium UBA1344	1948568	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.51494	33.3	-	DBSK01	19	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06453409	GCA_002306475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/475/GCA_002306475.1_ASM230647v1	28894102	-
Euryarchaeota archaeon	2026739	PRJNA391950	391950	Euryarchaeota	unclassified Euryarchaeota	0.800413	45.1	-	NVQX01	140	865	822	9/20/17	9/20/17	Contig	University of Southern California	SAMN07568996	GCA_002317815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/815/GCA_002317815.1_ASM231781v1	-	-
Sphingobacteriaceae bacterium	2021370	PRJNA407004	407004	FCB group	Bacteroidetes/Chlorobi group	5.65016	38.4	-	NVQB01	2	4875	4792	9/20/17	9/22/17	Contig	Nakdonggang National Institute of Biological Resources	SAMN07637374	GCA_002319075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/075/GCA_002319075.1_ASM231907v1	-	SH-48
Enterobacteriaceae bacterium UBA1802	1951653	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.24716	54.2	-	DCFO01	15	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453208	GCA_002319825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/825/GCA_002319825.1_ASM231982v1	28894102	-
Peptostreptococcaceae bacterium UBA1803	1953058	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.47083	33.5	-	DCFN01	33	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453209	GCA_002319805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/805/GCA_002319805.1_ASM231980v1	28894102	-
Bacteroidales bacterium UBA1797	1950434	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.40234	37.8	-	DCFT01	239	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453555	GCA_002319885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/885/GCA_002319885.1_ASM231988v1	28894102	-
Bacteroidales bacterium UBA1800	1950435	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.77446	48.2	-	DCFQ01	113	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453210	GCA_002319915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/915/GCA_002319915.1_ASM231991v1	28894102	-
Holophagaceae bacterium UBA1801	1951929	PRJNA348753	348753	Acidobacteria	Holophagae	4.24299	60.1	-	DCFP01	202	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453211	GCA_002319925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/925/GCA_002319925.1_ASM231992v1	28894102	-
Flavobacteriales bacterium UBA1694	1950956	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.99284	42.3	-	DCJS01	52	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453411	GCA_002319955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/955/GCA_002319955.1_ASM231995v1	28894102	-
Firmicutes bacterium UBA1702	1947939	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.12576	43.6	-	DCJK01	47	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451239	GCA_002320005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/005/GCA_002320005.1_ASM232000v1	28894102	-
Clostridiales bacterium UBA1701	1950825	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.92677	55.2	-	DCJL01	41	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451236	GCA_002320035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/035/GCA_002320035.1_ASM232003v1	28894102	-
Lachnospiraceae bacterium UBA1689	1951977	PRJNA348753	348753	Terrabacteria group	Firmicutes	5.00306	48.6	-	DCJX01	143	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452870	GCA_002320155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/155/GCA_002320155.1_ASM232015v1	28894102	-
Lachnospiraceae bacterium UBA1683	1951976	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.96328	43.7	-	DCKD01	98	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452874	GCA_002320245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/245/GCA_002320245.1_ASM232024v1	28894102	-
Porphyromonadaceae bacterium UBA1681	1952539	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.37605	55.7	-	DCKF01	40	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452872	GCA_002320275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/275/GCA_002320275.1_ASM232027v1	28894102	-
Flavobacteriaceae bacterium UBA1682	1951804	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.46412	37.3	-	DCKE01	29	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452873	GCA_002320285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/285/GCA_002320285.1_ASM232028v1	28894102	-
Patescibacteria group bacterium UBA1675	1948786	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.748194	44	-	DCKL01	85	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454217	GCA_002320355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/355/GCA_002320355.1_ASM232035v1	28894102	-
Fusobacteriia bacterium UBA1674	1948576	PRJNA348753	348753	Fusobacteria	Fusobacteriia	0.585339	33.2	-	DCKM01	50	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454218	GCA_002320375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/375/GCA_002320375.1_ASM232037v1	28894102	-
Proteobacteria bacterium UBA1673	1948137	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	1.42116	41.6	-	DCKN01	122	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454215	GCA_002320385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/385/GCA_002320385.1_ASM232038v1	28894102	-
Planctomycetaceae bacterium UBA1669	1952729	PRJNA348753	348753	PVC group	Planctomycetes	4.59072	48.1	-	DCKR01	483	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451698	GCA_002320435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/435/GCA_002320435.1_ASM232043v1	28894102	-
Ruminococcaceae bacterium UBA1691	1952288	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.20458	53.1	-	DCJV01	161	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457136	GCA_002320555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/555/GCA_002320555.1_ASM232055v1	28894102	-
Bacteroidales bacterium UBA1680	1950417	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.99719	48.5	-	DCKG01	39	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452871	GCA_002320605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/605/GCA_002320605.1_ASM232060v1	28894102	-
Myxococcales bacterium UBA1671	1961463	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	10.1916	51	-	DCKP01	312	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454213	GCA_002320695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/695/GCA_002320695.1_ASM232069v1	28894102	-
Phycisphaerales bacterium UBA1668	1951184	PRJNA348753	348753	PVC group	Planctomycetes	2.79807	57.3	-	DCKS01	259	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451697	GCA_002320715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/715/GCA_002320715.1_ASM232071v1	28894102	-
Planctomycetes bacterium UBA1662	1948126	PRJNA348753	348753	PVC group	Planctomycetes	4.41491	58.8	-	DCKY01	287	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451693	GCA_002320775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/775/GCA_002320775.1_ASM232077v1	28894102	-
Pseudomonadaceae bacterium UBA1659	1952769	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.18097	61	-	DCLB01	92	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453954	GCA_002320825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/825/GCA_002320825.1_ASM232082v1	28894102	-
Myxococcales bacterium UBA1660	1961462	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	7.98209	71.1	-	DCLA01	128	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451695	GCA_002320815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/815/GCA_002320815.1_ASM232081v1	28894102	-
Flavobacteriaceae bacterium UBA1658	1951803	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.58048	40.1	-	DCLC01	11	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453955	GCA_002320855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/855/GCA_002320855.1_ASM232085v1	28894102	-
Dehalococcoidia bacterium UBA1657	1948477	PRJNA348753	348753	Terrabacteria group	Chloroflexi	1.60865	39.7	-	DCLD01	207	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453956	GCA_002320875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/875/GCA_002320875.1_ASM232087v1	28894102	-
Bacillaceae bacterium UBA1651	1951477	PRJNA348753	348753	Terrabacteria group	Firmicutes	5.25773	35.1	-	DCLJ01	203	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453962	GCA_002320995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/995/GCA_002320995.1_ASM232099v1	28894102	-
Prevotellaceae bacterium UBA1633	1952454	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.12161	51.1	-	DCMB01	85	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457002	GCA_002321235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/235/GCA_002321235.1_ASM232123v1	28894102	-
Alphaproteobacteria bacterium UBA1632	1948363	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	1.87275	55	-	DCMC01	57	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457003	GCA_002321255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/255/GCA_002321255.1_ASM232125v1	28894102	-
Spirochaetales bacterium UBA1631	1951266	PRJNA348753	348753	Spirochaetes	Spirochaetia	1.98842	35.4	-	DCMD01	143	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457000	GCA_002321275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/275/GCA_002321275.1_ASM232127v1	28894102	-
Bacteroidales bacterium UBA1630	1950416	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.95958	50.2	-	DCME01	102	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457001	GCA_002321295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/295/GCA_002321295.1_ASM232129v1	28894102	-
Verrucomicrobia bacterium UBA1629	1948240	PRJNA348753	348753	PVC group	Verrucomicrobia	2.72398	65.8	-	DCMF01	136	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452192	GCA_002321305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/305/GCA_002321305.1_ASM232130v1	28894102	-
Bacteroidales bacterium UBA1628	1950415	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.89366	50.8	-	DCMG01	176	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452191	GCA_002321335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/335/GCA_002321335.1_ASM232133v1	28894102	-
Bacteroidales bacterium UBA1627	1950414	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.62939	46.3	-	DCMH01	179	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452199	GCA_002321345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/345/GCA_002321345.1_ASM232134v1	28894102	-
Prevotellaceae bacterium UBA1626	1952453	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.77046	51.7	-	DCMI01	174	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452198	GCA_002321355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/355/GCA_002321355.1_ASM232135v1	28894102	-
Bacillales bacterium UBA1624	1950244	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.46704	53.4	-	DCMK01	84	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452200	GCA_002321395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/395/GCA_002321395.1_ASM232139v1	28894102	-
Bacteroidales bacterium UBA1622	1950413	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.73645	41	-	DCMM01	73	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452194	GCA_002321415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/415/GCA_002321415.1_ASM232141v1	28894102	-
Verrucomicrobia bacterium UBA1620	1948239	PRJNA348753	348753	PVC group	Verrucomicrobia	1.152	63.2	-	DCMO01	88	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452196	GCA_002321455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/455/GCA_002321455.1_ASM232145v1	28894102	-
Bacteroidales bacterium UBA1621	1950412	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.86227	51	-	DCMN01	140	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452197	GCA_002321485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/485/GCA_002321485.1_ASM232148v1	28894102	-
Microbacteriaceae bacterium UBA1613	1952242	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.47238	69.7	-	DCMV01	21	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454483	GCA_002321595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/595/GCA_002321595.1_ASM232159v1	28894102	-
Gallionellaceae bacterium UBA1605	1951898	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	1.95567	55.6	-	DCND01	246	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451978	GCA_002321645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/645/GCA_002321645.1_ASM232164v1	28894102	-
Microbacteriaceae bacterium UBA1607	1952241	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.22011	69.2	-	DCNB01	148	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451980	GCA_002321675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/675/GCA_002321675.1_ASM232167v1	28894102	-
Methylophilaceae bacterium UBA1604	1952234	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	2.40084	42.1	-	DCNE01	67	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451977	GCA_002321705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/705/GCA_002321705.1_ASM232170v1	28894102	-
Buttiauxella sp. UBA1641	1946146	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.06854	54.9	-	DCLT01	40	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451424	GCA_002321695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/695/GCA_002321695.1_ASM232169v1	28894102	-
Enterobacteriaceae bacterium UBA1640	1951652	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.50957	56.6	-	DCLU01	318	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451423	GCA_002321735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/735/GCA_002321735.1_ASM232173v1	28894102	-
Spirochaetales bacterium UBA1625	1951265	PRJNA348753	348753	Spirochaetes	Spirochaetia	1.862	39.6	-	DCMJ01	150	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452201	GCA_002321785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/785/GCA_002321785.1_ASM232178v1	28894102	-
Candidatus Marinimicrobia bacterium UBA1611	1953216	PRJNA348753	348753	FCB group	Candidatus Marinimicrobia	1.90388	38	-	DCMX01	267	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454485	GCA_002321855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/855/GCA_002321855.1_ASM232185v1	28894102	-
Bdellovibrionaceae bacterium UBA1609	1961504	PRJNA348753	348753	Proteobacteria	Oligoflexia	3.54293	42	-	DCMZ01	17	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451982	GCA_002321895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/895/GCA_002321895.1_ASM232189v1	28894102	-
Competibacteraceae bacterium UBA1593	1951615	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.46725	56.9	-	DCNP01	64	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451712	GCA_002321995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/995/GCA_002321995.1_ASM232199v1	28894102	-
Enterobacteriaceae bacterium UBA1584	1951651	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.69162	56.7	-	DCNY01	14	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454228	GCA_002322185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/185/GCA_002322185.1_ASM232218v1	28894102	-
Cyanobacteria bacterium UBA1583	1947874	PRJNA348753	348753	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.34763	44.8	-	DCNZ01	272	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453087	GCA_002322275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/275/GCA_002322275.1_ASM232227v1	28894102	-
Candidatus Omnitrophica bacterium UBA1572	1953263	PRJNA348753	348753	PVC group	Candidatus Omnitrophica	1.49324	43.6	-	DCOK01	163	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455835	GCA_002322345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/345/GCA_002322345.1_ASM232234v1	28894102	-
Enterobacteriaceae bacterium UBA1576	1951650	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.16609	54.6	-	DCOG01	344	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452374	GCA_002322335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/335/GCA_002322335.1_ASM232233v1	28894102	-
Elusimicrobia bacterium UBA1570	1947910	PRJNA348753	348753	Elusimicrobia	unclassified Elusimicrobia	2.63579	55.9	-	DCOM01	233	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455837	GCA_002322375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/375/GCA_002322375.1_ASM232237v1	28894102	-
Candidatus Moranbacteria bacterium UBA1568	1953298	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.782421	41	-	DCOO01	60	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456198	GCA_002322415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/415/GCA_002322415.1_ASM232241v1	28894102	-
Candidatus Magasanikbacteria bacterium UBA1566	1953294	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	1.00247	40.9	-	DCOQ01	43	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456196	GCA_002322435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/435/GCA_002322435.1_ASM232243v1	28894102	-
Patescibacteria group bacterium UBA1567	1948785	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.532051	43	-	DCOP01	47	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456195	GCA_002322425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/425/GCA_002322425.1_ASM232242v1	28894102	-
Elusimicrobia bacterium UBA1565	1947909	PRJNA348753	348753	Elusimicrobia	unclassified Elusimicrobia	3.60015	62.3	-	DCOR01	408	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455028	GCA_002322475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/475/GCA_002322475.1_ASM232247v1	28894102	-
Ignavibacteriales bacterium UBA1563	1951142	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.77555	37.1	-	DCOT01	353	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456191	GCA_002322495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/495/GCA_002322495.1_ASM232249v1	28894102	-
Patescibacteria group bacterium UBA1561	1948784	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	1.00879	58	-	DCOV01	52	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456189	GCA_002322515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/515/GCA_002322515.1_ASM232251v1	28894102	-
Candidatus Omnitrophica bacterium UBA1562	1953262	PRJNA348753	348753	PVC group	Candidatus Omnitrophica	1.39886	39.8	-	DCOU01	159	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456192	GCA_002322525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/525/GCA_002322525.1_ASM232252v1	28894102	-
bacterium UBP5_UBA1559	1953435	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	1.97204	37.8	-	DCOX01	225	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451151	GCA_002322535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/535/GCA_002322535.1_ASM232253v1	28894102	-
Candidatus Magasanikbacteria bacterium UBA1557	1953293	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.840254	32.4	-	DCOZ01	67	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451141	GCA_002322575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/575/GCA_002322575.1_ASM232257v1	28894102	-
Candidatus Peribacter sp. UBA1555	1961371	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	1.30756	54.3	-	DCPB01	47	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451139	GCA_002322595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/595/GCA_002322595.1_ASM232259v1	28894102	-
Flavobacteriaceae bacterium UBA1552	1951802	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.40587	34.7	-	DCPE01	212	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452064	GCA_002322625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/625/GCA_002322625.1_ASM232262v1	28894102	-
Patescibacteria group bacterium UBA1554	1948782	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.485657	49.8	-	DCPC01	51	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451138	GCA_002322665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/665/GCA_002322665.1_ASM232266v1	28894102	-
Chrysiogenales bacterium UBA1553	1950805	PRJNA348753	348753	Chrysiogenetes	Chrysiogenetes	2.49639	69.5	-	DCPD01	280	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451145	GCA_002322655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/655/GCA_002322655.1_ASM232265v1	28894102	-
Chitinophagaceae bacterium UBA1596	1951543	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.22083	42.1	-	DCNM01	167	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451715	GCA_002322745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/745/GCA_002322745.1_ASM232274v1	28894102	-
Hyphomonadaceae bacterium UBA1595	1951944	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.78353	41.3	-	DCNN01	34	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451714	GCA_002322775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/775/GCA_002322775.1_ASM232277v1	28894102	-
Candidatus Saccharibacteria bacterium UBA1594	1953317	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.95987	48.1	-	DCNO01	27	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451713	GCA_002322785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/785/GCA_002322785.1_ASM232278v1	28894102	-
Opitutae bacterium UBA1569	1948709	PRJNA348753	348753	PVC group	Verrucomicrobia	1.84044	43.3	-	DCON01	45	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451911	GCA_002322915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/915/GCA_002322915.1_ASM232291v1	28894102	-
Candidatus Omnitrophica bacterium UBA1560	1953261	PRJNA348753	348753	PVC group	Candidatus Omnitrophica	1.23224	42.7	-	DCOW01	50	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456190	GCA_002322955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/955/GCA_002322955.1_ASM232295v1	28894102	-
Patescibacteria group bacterium UBA1558	1948783	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.850359	36.7	-	DCOY01	90	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451150	GCA_002322975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/975/GCA_002322975.1_ASM232297v1	28894102	-
Bacteroidales bacterium UBA1556	1950411	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.19725	32.9	-	DCPA01	118	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451140	GCA_002322995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/995/GCA_002322995.1_ASM232299v1	28894102	-
Cohaesibacter sp. ES.047	1798205	PRJEB22444	401564	Proteobacteria	Alphaproteobacteria	5.11033	55.5	chromosome I:LT907844.1	-	1	4756	4469	9/6/17	9/6/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04515647	GCA_900215505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/215/505/GCA_900215505.1_IMG-taxon_2615840601_annotated_assembly	-	ES.047
Cytophagales bacterium TFI 002	1945892	PRJEB22402	401624	FCB group	Bacteroidetes/Chlorobi group	5.46157	37.4	chromosome I:LT907983.1	-	1	4547	4446	9/19/17	9/19/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN06298216	GCA_900230115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/230/115/GCA_900230115.1_IMG-taxon_2634166896_annotated_assembly	-	TFI 002
Jatrophihabitans sp. GAS493	1907575	PRJEB22454	401618	Terrabacteria group	Actinobacteria	4.88002	66.9	chromosome I:LT907982.1	-	1	4432	4310	9/19/17	9/19/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05892883	GCA_900230215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/230/215/GCA_900230215.1_IMG-taxon_2740892597_annotated_assembly	-	GAS493
Candidatus Saccharibacteria bacterium UBA1547	1953316	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.757666	40.5	-	DCPJ01	9	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455898	GCA_002323055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/055/GCA_002323055.1_ASM232305v1	28894102	-
Patescibacteria group bacterium UBA1545	1948779	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.884043	37.9	-	DCPL01	84	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455900	GCA_002323075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/075/GCA_002323075.1_ASM232307v1	28894102	-
bacterium UBP5_UBA1551	1953434	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	2.58014	48.3	-	DCPF01	188	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451143	GCA_002323085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/085/GCA_002323085.1_ASM232308v1	28894102	-
Patescibacteria group bacterium UBA1549	1948780	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.66003	42.7	-	DCPH01	31	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455907	GCA_002323095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/095/GCA_002323095.1_ASM232309v1	28894102	-
Patescibacteria group bacterium UBA1544	1948778	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.858788	48.3	-	DCPM01	36	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455901	GCA_002323135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/135/GCA_002323135.1_ASM232313v1	28894102	-
Candidatus Omnitrophica bacterium UBA1542	1953260	PRJNA348753	348753	PVC group	Candidatus Omnitrophica	1.06327	42.3	-	DCPO01	88	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455903	GCA_002323155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/155/GCA_002323155.1_ASM232315v1	28894102	-
Proteobacteria bacterium UBA1541	1948136	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	2.53107	62.6	-	DCPP01	118	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455904	GCA_002323185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/185/GCA_002323185.1_ASM232318v1	28894102	-
Patescibacteria group bacterium UBA1539	1948777	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.773699	46.6	-	DCPR01	50	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452931	GCA_002323215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/215/GCA_002323215.1_ASM232321v1	28894102	-
Myxococcales bacterium UBA1532	1961461	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	5.57941	52.2	-	DCPY01	464	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450506	GCA_002323315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/315/GCA_002323315.1_ASM232331v1	28894102	-
Coxiellaceae bacterium UBA1530	1951631	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	1.84306	40.7	-	DCQA01	64	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452922	GCA_002323325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/325/GCA_002323325.1_ASM232332v1	28894102	-
Gemmatimonadales bacterium UBA1525	1951103	PRJNA348753	348753	FCB group	Gemmatimonadetes	2.24197	54	-	DCQF01	277	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453423	GCA_002323355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/355/GCA_002323355.1_ASM232335v1	28894102	-
Legionellales bacterium UBA1524	1951145	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	1.93014	38.7	-	DCQG01	205	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453424	GCA_002323365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/365/GCA_002323365.1_ASM232336v1	28894102	-
Flavobacteriaceae bacterium UBA1523	1951801	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.3555	39.9	-	DCQH01	220	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453429	GCA_002323395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/395/GCA_002323395.1_ASM232339v1	28894102	-
Flavobacteriaceae bacterium UBA1519	1951800	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.52929	39.4	-	DCQL01	66	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452621	GCA_002323475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/475/GCA_002323475.1_ASM232347v1	28894102	-
Balneolaceae bacterium UBA1514	1951487	PRJNA348753	348753	Balneolaeota	Balneolia	1.58237	39.8	-	DCQQ01	43	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452626	GCA_002323515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/515/GCA_002323515.1_ASM232351v1	28894102	-
Bacteriovoracaceae bacterium UBA1511	1961477	PRJNA348753	348753	Proteobacteria	Oligoflexia	1.86356	35.7	-	DCQT01	125	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452623	GCA_002323535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/535/GCA_002323535.1_ASM232353v1	28894102	-
Flavobacteriales bacterium UBA1510	1950954	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.89237	55	-	DCQU01	227	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452622	GCA_002323545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/545/GCA_002323545.1_ASM232354v1	28894102	-
Alphaproteobacteria bacterium UBA1509	1948362	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	1.75206	55.3	-	DCQV01	206	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456423	GCA_002323575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/575/GCA_002323575.1_ASM232357v1	28894102	-
Opitutae bacterium UBA1508	1948707	PRJNA348753	348753	PVC group	Verrucomicrobia	2.75122	48.8	-	DCQW01	242	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456424	GCA_002323585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/585/GCA_002323585.1_ASM232358v1	28894102	-
Akkermansiaceae bacterium UBA1507	1951352	PRJNA348753	348753	PVC group	Verrucomicrobia	3.86348	53.6	-	DCQX01	230	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456429	GCA_002323615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/615/GCA_002323615.1_ASM232361v1	28894102	-
Patescibacteria group bacterium UBA1550	1948781	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.66908	42.9	-	DCPG01	27	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451142	GCA_002323665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/665/GCA_002323665.1_ASM232366v1	28894102	-
Elusimicrobia bacterium UBA1548	1947908	PRJNA348753	348753	Elusimicrobia	unclassified Elusimicrobia	1.87736	36.9	-	DCPI01	164	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455908	GCA_002323695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/695/GCA_002323695.1_ASM232369v1	28894102	-
Nitrospiraceae bacterium UBA1546	1952975	PRJNA348753	348753	Nitrospirae	Nitrospira	1.87147	43.4	-	DCPK01	190	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455899	GCA_002323715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/715/GCA_002323715.1_ASM232371v1	28894102	-
Firmicutes bacterium UBA1535	1947938	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.11944	31.2	-	DCPV01	313	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452927	GCA_002323775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/775/GCA_002323775.1_ASM232377v1	28894102	-
Gammaproteobacteria bacterium UBA1529	1948585	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.91095	50.9	-	DCQB01	298	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453433	GCA_002323805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/805/GCA_002323805.1_ASM232380v1	28894102	-
Flavobacteriales bacterium UBA1531	1950955	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.38006	47.9	-	DCPZ01	108	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454584	GCA_002323795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/795/GCA_002323795.1_ASM232379v1	28894102	-
Akkermansiaceae bacterium UBA1527	1951354	PRJNA348753	348753	PVC group	Verrucomicrobia	3.6117	51.3	-	DCQD01	137	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452066	GCA_002323855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/855/GCA_002323855.1_ASM232385v1	28894102	-
Actinobacteria bacterium UBA1526	1948322	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.9178	60.8	-	DCQE01	126	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457316	GCA_002323875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/875/GCA_002323875.1_ASM232387v1	28894102	-
Akkermansiaceae bacterium UBA1518	1951353	PRJNA348753	348753	PVC group	Verrucomicrobia	3.75936	48.5	-	DCQM01	229	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452620	GCA_002323895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/895/GCA_002323895.1_ASM232389v1	28894102	-
Alteromonadaceae bacterium UBA1517	1951383	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.26893	48.7	-	DCQN01	386	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452629	GCA_002323905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/905/GCA_002323905.1_ASM232390v1	28894102	-
Proteobacteria bacterium UBA1515	1948135	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	0.811483	40	-	DCQP01	48	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452627	GCA_002323935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/935/GCA_002323935.1_ASM232393v1	28894102	-
Opitutae bacterium UBA1513	1948708	PRJNA348753	348753	PVC group	Verrucomicrobia	1.74888	42.4	-	DCQR01	97	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452625	GCA_002323955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/955/GCA_002323955.1_ASM232395v1	28894102	-
Akkermansiaceae bacterium UBA1506	1951351	PRJNA348753	348753	PVC group	Verrucomicrobia	3.54128	51.2	-	DCQY01	142	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456430	GCA_002323995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/995/GCA_002323995.1_ASM232399v1	28894102	-
Xanthomonadaceae bacterium NML93-0831	2032568	PRJNA400624	400624	Proteobacteria	Gammaproteobacteria	3.6464	68.9	-	NTJF01	30	3356	3219	9/21/17	9/23/17	Contig	National Microbiology Laboratory/ Public Health Agency of Canada	SAMN07572155	GCA_002324865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/865/GCA_002324865.1_ASM232486v1	-	NML93-0831
Xanthomonadaceae bacterium NML93-0793	2032567	PRJNA400624	400624	Proteobacteria	Gammaproteobacteria	3.64491	68.9	-	NTJG01	44	3359	3228	9/21/17	9/23/17	Contig	National Microbiology Laboratory/ Public Health Agency of Canada	SAMN07572154	GCA_002324875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/875/GCA_002324875.1_ASM232487v1	-	NML93-0793
Xanthomonadaceae bacterium NML93-0792	2032566	PRJNA400624	400624	Proteobacteria	Gammaproteobacteria	3.6437	68.9	-	NTJH01	50	3357	3225	9/21/17	9/23/17	Contig	National Microbiology Laboratory/ Public Health Agency of Canada	SAMN07572153	GCA_002324915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/915/GCA_002324915.1_ASM232491v1	-	NML93-0792
Enterobacteriaceae bacterium UBA1499	1951649	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.04421	56.4	-	DCRF01	103	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455377	GCA_002324965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/965/GCA_002324965.1_ASM232496v1	28894102	-
Flavobacteriales bacterium UBA1494	1950953	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.92753	40.3	-	DCRK01	36	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455380	GCA_002325045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/045/GCA_002325045.1_ASM232504v1	28894102	-
Microbacteriaceae bacterium UBA1492	1952240	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.55235	69.2	-	DCRM01	32	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455386	GCA_002325105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/105/GCA_002325105.1_ASM232510v1	28894102	-
Rhizobiales bacterium UBA1489	1951215	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.88343	60.6	-	DCRP01	38	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450641	GCA_002325185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/185/GCA_002325185.1_ASM232518v1	28894102	-
Balneolaceae bacterium UBA1488	1951486	PRJNA348753	348753	Balneolaeota	Balneolia	3.23663	37.5	-	DCRQ01	9	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450640	GCA_002325205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/205/GCA_002325205.1_ASM232520v1	28894102	-
Balneolaceae bacterium UBA1486	1951485	PRJNA348753	348753	Balneolaeota	Balneolia	2.70328	40.9	-	DCRS01	150	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450646	GCA_002325215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/215/GCA_002325215.1_ASM232521v1	28894102	-
Microbacteriaceae bacterium UBA1487	1952239	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.49019	69.5	-	DCRR01	24	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450647	GCA_002325245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/245/GCA_002325245.1_ASM232524v1	28894102	-
Alphaproteobacteria bacterium UBA1485	1948361	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.64826	62.3	-	DCRT01	140	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450649	GCA_002325265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/265/GCA_002325265.1_ASM232526v1	28894102	-
Cellvibrionales bacterium UBA1483	1950783	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.38545	52.2	-	DCRV01	71	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450643	GCA_002325295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/295/GCA_002325295.1_ASM232529v1	28894102	-
Balneolaceae bacterium UBA1481	1951484	PRJNA348753	348753	Balneolaeota	Balneolia	3.23417	37.4	-	DCRX01	16	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450645	GCA_002325345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/345/GCA_002325345.1_ASM232534v1	28894102	-
Rhizobiales bacterium UBA1480	1951214	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	4.03072	61.1	-	DCRY01	17	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450644	GCA_002325365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/365/GCA_002325365.1_ASM232536v1	28894102	-
Rhodospirillaceae bacterium UBA1479	1952849	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.93217	63.7	-	DCRZ01	12	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453301	GCA_002325375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/375/GCA_002325375.1_ASM232537v1	28894102	-
Microbacteriaceae bacterium UBA1477	1952238	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.38891	69.4	-	DCSB01	87	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453293	GCA_002325415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/415/GCA_002325415.1_ASM232541v1	28894102	-
Flavobacteriaceae bacterium UBA1473	1951799	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.22482	35.7	-	DCSF01	44	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453297	GCA_002325485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/485/GCA_002325485.1_ASM232548v1	28894102	-
Chloroflexaceae bacterium UBA1466	1951568	PRJNA348753	348753	Terrabacteria group	Chloroflexi	2.78987	49.9	-	DCSM01	196	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454074	GCA_002325605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/605/GCA_002325605.1_ASM232560v1	28894102	-
Amoebophilaceae bacterium UBA1467	1951399	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	0.858736	45.4	-	DCSL01	83	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454075	GCA_002325615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/615/GCA_002325615.1_ASM232561v1	28894102	-
Pseudomonadaceae bacterium UBA1462	1952768	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.57231	60.1	-	DCSQ01	170	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454078	GCA_002325695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/695/GCA_002325695.1_ASM232569v1	28894102	-
Erythrobacteraceae bacterium UBA1460	1951751	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.01281	63.9	-	DCSS01	23	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454076	GCA_002325745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/745/GCA_002325745.1_ASM232574v1	28894102	-
bacterium UBA1459	1947791	PRJNA348753	348753	unclassified Bacteria	unclassified Bacteria (miscellaneous)	0.612591	23.8	-	DCST01	61	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456904	GCA_002325765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/765/GCA_002325765.1_ASM232576v1	28894102	-
Bacteroidales bacterium UBA1458	1950410	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.9515	49.4	-	DCSU01	174	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456906	GCA_002325785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/785/GCA_002325785.1_ASM232578v1	28894102	-
Brucella suis bv. 2	645170	PRJNA242297	242297	Proteobacteria	Alphaproteobacteria	3.32846	57.1842	chromosome I:NZ_CP007720.1/CP007720.1; chromosome II:NZ_CP007721.1/CP007721.1	-	2	3389	3164	6/5/14	4/2/17	Complete Genome	"National Institute for Agrarian and Veterinary Research, P.I. & BioFIG - Center for Biodiversity Functional & Integrative Genomics Faculty of Sciences"	SAMN02692662	GCA_000698345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/345/GCA_000698345.1_ASM69834v1	-	Bs396CITA
Firmicutes bacterium UBA2203	1947946	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.21022	43.1	-	DCUX01	55	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451427	GCA_002327235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/235/GCA_002327235.1_ASM232723v1	28894102	-
Firmicutes bacterium UBA2209	1947947	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.57926	42	-	DCUR01	100	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453247	GCA_002327245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/245/GCA_002327245.1_ASM232724v1	28894102	-
bacterium UBA2214	1947823	PRJNA348753	348753	unclassified Bacteria	unclassified Bacteria (miscellaneous)	4.20001	56.2	-	DCUM01	259	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452215	GCA_002327255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/255/GCA_002327255.1_ASM232725v1	28894102	-
Desulfobulbaceae bacterium UBA2213	1961543	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.45567	51.7	-	DCUN01	214	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452193	GCA_002327225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/225/GCA_002327225.1_ASM232722v1	28894102	-
Holophagales bacterium UBA2201	1951135	PRJNA348753	348753	Acidobacteria	Holophagae	3.64621	65.4	-	DCUZ01	121	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453950	GCA_002327305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/305/GCA_002327305.1_ASM232730v1	28894102	-
Syntrophaceae bacterium UBA2192	1961422	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	3.65697	59.3	-	DCVI01	227	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456380	GCA_002327315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/315/GCA_002327315.1_ASM232731v1	28894102	-
Desulfuromonadaceae bacterium UBA2197	1961569	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.05852	56.5	-	DCVD01	162	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456383	GCA_002327325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/325/GCA_002327325.1_ASM232732v1	28894102	-
Patescibacteria group bacterium UBA2193	1948798	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.748501	36	-	DCVH01	99	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456270	GCA_002327335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/335/GCA_002327335.1_ASM232733v1	28894102	-
Caldiserica bacterium UBA2182	1953179	PRJNA348753	348753	Caldiserica	unclassified Caldiserica	1.0861	39	-	DCVS01	27	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452572	GCA_002327385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/385/GCA_002327385.1_ASM232738v1	28894102	-
Desulfobacteraceae bacterium UBA2174	1961530	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	3.85799	62.3	-	DCWA01	47	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455577	GCA_002327445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/445/GCA_002327445.1_ASM232744v1	28894102	-
bacterium UBP1_UBA2172	1953408	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	2.09962	65.3	-	DCWC01	259	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455571	GCA_002327475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/475/GCA_002327475.1_ASM232747v1	28894102	-
Gammaproteobacteria bacterium UBA2168	1948591	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.73642	59.6	-	DCWG01	165	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450824	GCA_002327525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/525/GCA_002327525.1_ASM232752v1	28894102	-
Patescibacteria group bacterium UBA2169	1948797	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.654072	38.5	-	DCWF01	77	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450825	GCA_002327545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/545/GCA_002327545.1_ASM232754v1	28894102	-
Rhodospirillaceae bacterium UBA2165	1952852	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	4.39747	50.2	-	DCWJ01	195	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450831	GCA_002327565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/565/GCA_002327565.1_ASM232756v1	28894102	-
Patescibacteria group bacterium UBA2163	1948796	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.476093	38.2	-	DCWL01	16	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450829	GCA_002327585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/585/GCA_002327585.1_ASM232758v1	28894102	-
Dehalococcoidia bacterium UBA2145	1948479	PRJNA348753	348753	Terrabacteria group	Chloroflexi	1.11892	47.8	-	DCXD01	115	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451738	GCA_002327645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/645/GCA_002327645.1_ASM232764v1	28894102	-
Acidobacteria bacterium UBA2140	1953102	PRJNA348753	348753	Acidobacteria	unclassified Acidobacteria	3.45617	66.1	-	DCXI01	80	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451723	GCA_002327665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/665/GCA_002327665.1_ASM232766v1	28894102	-
Patescibacteria group bacterium UBA2135	1948793	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.815395	40	-	DCXN01	31	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455082	GCA_002327685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/685/GCA_002327685.1_ASM232768v1	28894102	-
Candidatus Marinimicrobia bacterium UBA2134	1953221	PRJNA348753	348753	FCB group	Candidatus Marinimicrobia	2.18404	41	-	DCXO01	254	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455083	GCA_002327705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/705/GCA_002327705.1_ASM232770v1	28894102	-
Proteobacteria bacterium UBA2133	1948144	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	2.50329	57.7	-	DCXP01	95	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455084	GCA_002327725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/725/GCA_002327725.1_ASM232772v1	28894102	-
bacterium UBA2220	1947793	PRJNA348753	348753	unclassified Bacteria	unclassified Bacteria (miscellaneous)	1.50137	66.4	-	DCUG01	117	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452995	GCA_002327745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/745/GCA_002327745.1_ASM232774v1	28894102	-
bacterium UBA2219	1947824	PRJNA348753	348753	unclassified Bacteria	unclassified Bacteria (miscellaneous)	2.77566	66.8	-	DCUH01	142	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454047	GCA_002327765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/765/GCA_002327765.1_ASM232776v1	28894102	-
Phycisphaerales bacterium UBA2218	1951190	PRJNA348753	348753	PVC group	Planctomycetes	6.32108	60.7	-	DCUI01	342	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454046	GCA_002327785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/785/GCA_002327785.1_ASM232778v1	28894102	-
Candidatus Marinimicrobia bacterium UBA2216	1953228	PRJNA348753	348753	FCB group	Candidatus Marinimicrobia	2.34153	44.7	-	DCUK01	28	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453147	GCA_002327805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/805/GCA_002327805.1_ASM232780v1	28894102	-
Patescibacteria group bacterium UBA2211	1948800	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.526355	32.5	-	DCUP01	11	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454041	GCA_002327845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/845/GCA_002327845.1_ASM232784v1	28894102	-
Syntrophaceae bacterium UBA2210	1961425	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.20703	48.1	-	DCUQ01	60	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454040	GCA_002327865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/865/GCA_002327865.1_ASM232786v1	28894102	-
Syntrophaceae bacterium UBA2208	1961424	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	3.5767	46	-	DCUS01	248	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453248	GCA_002327885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/885/GCA_002327885.1_ASM232788v1	28894102	-
candidate division WOR-3 bacterium UBA2202	1948307	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	2.03589	38.1	-	DCUY01	123	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451428	GCA_002327905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/905/GCA_002327905.1_ASM232790v1	28894102	-
Anaerolineales bacterium UBA2200	1950191	PRJNA348753	348753	Terrabacteria group	Chloroflexi	2.80578	62.1	-	DCVA01	54	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453951	GCA_002327925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/925/GCA_002327925.1_ASM232792v1	28894102	-
Candidatus Aminicenantes bacterium UBA2199	1953193	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	2.51353	62.1	-	DCVB01	130	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456373	GCA_002327965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/965/GCA_002327965.1_ASM232796v1	28894102	-
Syntrophaceae bacterium UBA2188	1961421	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	3.98206	45.7	-	DCVM01	186	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452576	GCA_002327985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/985/GCA_002327985.1_ASM232798v1	28894102	-
Deltaproteobacteria bacterium UBA2159	1948539	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	4.04096	45.7	-	DCWP01	284	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455859	GCA_002327995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/995/GCA_002327995.1_ASM232799v1	28894102	-
Patescibacteria group bacterium UBA2196	1948799	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.754364	36.1	-	DCVE01	18	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456285	GCA_002328025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/025/GCA_002328025.1_ASM232802v1	28894102	-
Bacteroidales bacterium UBA2183	1950437	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.02264	50	-	DCVR01	20	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452573	GCA_002328065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/065/GCA_002328065.1_ASM232806v1	28894102	-
Anaerolineales bacterium UBA2181	1950190	PRJNA348753	348753	Terrabacteria group	Chloroflexi	4.65601	62.3	-	DCVT01	62	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452575	GCA_002328075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/075/GCA_002328075.1_ASM232807v1	28894102	-
Nitrospinaceae bacterium UBA2164	1953052	PRJNA348753	348753	Nitrospinae/Tectomicrobia group	Nitrospinae	2.87271	59	-	DCWK01	361	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450830	GCA_002328125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/125/GCA_002328125.1_ASM232812v1	28894102	-
Syntrophaceae bacterium UBA2175	1961419	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	1.81417	45.9	-	DCVZ01	87	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455576	GCA_002328145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/145/GCA_002328145.1_ASM232814v1	28894102	-
Desulfobacteraceae bacterium UBA2156	1961529	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.94116	45.8	-	DCWS01	78	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455854	GCA_002328165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/165/GCA_002328165.1_ASM232816v1	28894102	-
Dehalococcoidia bacterium UBA2158	1948480	PRJNA348753	348753	Terrabacteria group	Chloroflexi	3.03469	57.6	-	DCWQ01	73	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455860	GCA_002328185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/185/GCA_002328185.1_ASM232818v1	28894102	-
Acidobacteria bacterium UBA2167	1953104	PRJNA348753	348753	Acidobacteria	unclassified Acidobacteria	3.31443	55.3	-	DCWH01	257	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450833	GCA_002328195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/195/GCA_002328195.1_ASM232819v1	28894102	-
Proteobacteria bacterium UBA2157	1948146	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	2.49667	57.7	-	DCWR01	91	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455853	GCA_002328225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/225/GCA_002328225.1_ASM232822v1	28894102	-
Candidatus Marinimicrobia bacterium UBA2152	1953226	PRJNA348753	348753	FCB group	Candidatus Marinimicrobia	1.78594	42.8	-	DCWW01	51	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455858	GCA_002328235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/235/GCA_002328235.1_ASM232823v1	28894102	-
Candidatus Marinimicrobia bacterium UBA2151	1953225	PRJNA348753	348753	FCB group	Candidatus Marinimicrobia	1.80953	48.6	-	DCWX01	141	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455855	GCA_002328255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/255/GCA_002328255.1_ASM232825v1	28894102	-
Candidatus Marinimicrobia bacterium UBA2146	1953222	PRJNA348753	348753	FCB group	Candidatus Marinimicrobia	1.84332	48.6	-	DCXC01	143	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451093	GCA_002328285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/285/GCA_002328285.1_ASM232828v1	28894102	-
Dehalococcoidia bacterium UBA2141	1948478	PRJNA348753	348753	Terrabacteria group	Chloroflexi	3.73983	59.9	-	DCXH01	243	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451724	GCA_002328345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/345/GCA_002328345.1_ASM232834v1	28894102	-
Candidatus Marinimicrobia bacterium UBA2150	1953224	PRJNA348753	348753	FCB group	Candidatus Marinimicrobia	1.87829	45.2	-	DCWY01	155	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452952	GCA_002328325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/325/GCA_002328325.1_ASM232832v1	28894102	-
Rhodospirillaceae bacterium UBA2139	1952851	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.4941	61.3	-	DCXJ01	169	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455088	GCA_002328385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/385/GCA_002328385.1_ASM232838v1	28894102	-
Proteobacteria bacterium UBA2136	1948145	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	1.72789	44.3	-	DCXM01	10	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455081	GCA_002328405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/405/GCA_002328405.1_ASM232840v1	28894102	-
Clostridiaceae bacterium UBA2223	1951570	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.76122	46.7	-	DCUD01	281	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452992	GCA_002328435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/435/GCA_002328435.1_ASM232843v1	28894102	-
Candidatus Dojkabacteria bacterium UBA2222	1953394	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.736233	33.7	-	DCUE01	78	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452993	GCA_002328465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/465/GCA_002328465.1_ASM232846v1	28894102	-
Deltaproteobacteria bacterium UBA2221	1948540	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.18507	53.5	-	DCUF01	89	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452994	GCA_002328485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/485/GCA_002328485.1_ASM232848v1	28894102	-
Erysipelotrichaceae bacterium UBA2212	1951743	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.82703	40.7	-	DCUO01	97	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454038	GCA_002328515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/515/GCA_002328515.1_ASM232851v1	28894102	-
Syntrophaceae bacterium UBA2207	1961423	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.0692	55.9	-	DCUT01	146	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453240	GCA_002328545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/545/GCA_002328545.1_ASM232854v1	28894102	-
Candidatus Moranbacteria bacterium UBA2206	1953299	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	1.16338	35.7	-	DCUU01	79	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453241	GCA_002328565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/565/GCA_002328565.1_ASM232856v1	28894102	-
Spirochaetia bacterium UBA2205	1948756	PRJNA348753	348753	Spirochaetes	Spirochaetia	3.04122	36.7	-	DCUV01	75	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451412	GCA_002328585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/585/GCA_002328585.1_ASM232858v1	28894102	-
Synergistaceae bacterium UBA2204	1952904	PRJNA348753	348753	Synergistetes	Synergistia	0.82881	52.2	-	DCUW01	44	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451413	GCA_002328605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/605/GCA_002328605.1_ASM232860v1	28894102	-
Bacteroidales bacterium UBA2198	1950438	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.90018	40.4	-	DCVC01	396	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456374	GCA_002328625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/625/GCA_002328625.1_ASM232862v1	28894102	-
Nitrospiraceae bacterium UBA2194	1952977	PRJNA348753	348753	Nitrospirae	Nitrospira	2.19801	47.9	-	DCVG01	132	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456382	GCA_002328665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/665/GCA_002328665.1_ASM232866v1	28894102	-
Candidatus Aminicenantes bacterium UBA2191	1953192	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	2.37431	47.3	-	DCVJ01	108	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456266	GCA_002328685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/685/GCA_002328685.1_ASM232868v1	28894102	-
Acetothermia bacterium UBA2187	1953092	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.930847	68.6	-	DCVN01	36	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452569	GCA_002328705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/705/GCA_002328705.1_ASM232870v1	28894102	-
Syntrophaceae bacterium UBA2185	1961420	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.95572	45.7	-	DCVP01	297	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452571	GCA_002328725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/725/GCA_002328725.1_ASM232872v1	28894102	-
Actinobacteria bacterium UBA2184	1953117	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.05461	67.7	-	DCVQ01	40	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452570	GCA_002328745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/745/GCA_002328745.1_ASM232874v1	28894102	-
Rhodocyclaceae bacterium UBA2179	1952836	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	2.32018	56.5	-	DCVV01	106	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455568	GCA_002328755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/755/GCA_002328755.1_ASM232875v1	28894102	-
Anaerolineaceae bacterium UBA2178	1951404	PRJNA348753	348753	Terrabacteria group	Chloroflexi	1.92492	54.6	-	DCVW01	35	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455569	GCA_002328785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/785/GCA_002328785.1_ASM232878v1	28894102	-
Candidatus Dojkabacteria bacterium UBA2177	1953393	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.53253	36	-	DCVX01	42	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455574	GCA_002328805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/805/GCA_002328805.1_ASM232880v1	28894102	-
Acidobacteria bacterium UBA2161	1953103	PRJNA348753	348753	Acidobacteria	unclassified Acidobacteria	3.63183	67.2	-	DCWN01	44	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450827	GCA_002328835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/835/GCA_002328835.1_ASM232883v1	28894102	-
Nitrospiraceae bacterium UBA2166	1952976	PRJNA348753	348753	Nitrospirae	Nitrospira	2.0712	45.6	-	DCWI01	127	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450832	GCA_002328825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/825/GCA_002328825.1_ASM232882v1	28894102	-
Dehalococcoidia bacterium UBA2160	1948481	PRJNA348753	348753	Terrabacteria group	Chloroflexi	3.85935	60.4	-	DCWO01	181	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450826	GCA_002328865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/865/GCA_002328865.1_ASM232886v1	28894102	-
Candidatus Marinimicrobia bacterium UBA2153	1953227	PRJNA348753	348753	FCB group	Candidatus Marinimicrobia	1.6977	38.8	-	DCWV01	57	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452953	GCA_002328885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/885/GCA_002328885.1_ASM232888v1	28894102	-
Candidatus Marinimicrobia bacterium UBA2149	1953223	PRJNA348753	348753	FCB group	Candidatus Marinimicrobia	1.33114	43.1	-	DCWZ01	113	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451098	GCA_002328905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/905/GCA_002328905.1_ASM232890v1	28894102	-
Patescibacteria group bacterium UBA2142	1948794	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.467754	38.2	-	DCXG01	17	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451721	GCA_002328945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/945/GCA_002328945.1_ASM232894v1	28894102	-
Patescibacteria group bacterium UBA2143	1948795	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.546429	36.1	-	DCXF01	42	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451722	GCA_002328955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/955/GCA_002328955.1_ASM232895v1	28894102	-
Deltaproteobacteria bacterium UBA2138	1948538	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	4.07387	45.7	-	DCXK01	297	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455089	GCA_002328985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/985/GCA_002328985.1_ASM232898v1	28894102	-
Proteobacteria bacterium UBA2132	1948143	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	1.88234	50.5	-	DCXQ01	66	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455085	GCA_002328995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/995/GCA_002328995.1_ASM232899v1	28894102	-
Desulfobacteraceae bacterium UBA2130	1961528	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.98027	45.6	-	DCXS01	71	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455087	GCA_002329025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/025/GCA_002329025.1_ASM232902v1	28894102	-
Candidatus Marinimicrobia bacterium UBA2129	1953220	PRJNA348753	348753	FCB group	Candidatus Marinimicrobia	1.78843	42.8	-	DCXT01	46	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450350	GCA_002329045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/045/GCA_002329045.1_ASM232904v1	28894102	-
Candidatus Marinimicrobia bacterium UBA2128	1953219	PRJNA348753	348753	FCB group	Candidatus Marinimicrobia	1.48229	43.3	-	DCXU01	106	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450349	GCA_002329065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/065/GCA_002329065.1_ASM232906v1	28894102	-
Candidatus Marinimicrobia bacterium UBA2125	1953217	PRJNA348753	348753	FCB group	Candidatus Marinimicrobia	1.96632	45.1	-	DCXX01	152	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450342	GCA_002329125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/125/GCA_002329125.1_ASM232912v1	28894102	-
Candidatus Marinimicrobia bacterium UBA2126	1953218	PRJNA348753	348753	FCB group	Candidatus Marinimicrobia	1.56691	38.7	-	DCXW01	58	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450343	GCA_002329145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/145/GCA_002329145.1_ASM232914v1	28894102	-
Candidatus Roizmanbacteria bacterium UBA1450	1953308	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	1.42787	41	-	DCTC01	2	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451558	GCA_002329205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/205/GCA_002329205.1_ASM232920v1	28894102	-
Ruminococcaceae bacterium UBA1447	1952286	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.60769	46.3	-	DCTF01	177	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451865	GCA_002329225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/225/GCA_002329225.1_ASM232922v1	28894102	-
Clostridiales bacterium UBA1446	1950824	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.34027	54.7	-	DCTG01	232	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451864	GCA_002329245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/245/GCA_002329245.1_ASM232924v1	28894102	-
Patescibacteria group bacterium UBA1441	1948775	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.409872	41.2	-	DCTL01	19	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454368	GCA_002329255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/255/GCA_002329255.1_ASM232925v1	28894102	-
Eubacteriaceae bacterium UBA1433	1951763	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.60515	42.6	-	DCTT01	27	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451856	GCA_002329295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/295/GCA_002329295.1_ASM232929v1	28894102	-
Ruminococcaceae bacterium UBA1438	1952285	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.75044	43.9	-	DCTO01	122	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451855	GCA_002329285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/285/GCA_002329285.1_ASM232928v1	28894102	-
Anaerolineales bacterium UBA1429	1950188	PRJNA348753	348753	Terrabacteria group	Chloroflexi	3.28282	67.1	-	DCTX01	95	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456895	GCA_002329325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/325/GCA_002329325.1_ASM232932v1	28894102	-
Ruminococcaceae bacterium UBA1425	1952284	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.28829	50.3	-	DCUB01	62	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456901	GCA_002329365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/365/GCA_002329365.1_ASM232936v1	28894102	-
Candidatus Shapirobacteria bacterium UBA1435	1953382	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.799308	46.6	-	DCTR01	48	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453856	GCA_002329385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/385/GCA_002329385.1_ASM232938v1	28894102	-
Elusimicrobia bacterium UBA1436	1947907	PRJNA348753	348753	Elusimicrobia	unclassified Elusimicrobia	1.45574	54.2	-	DCTQ01	109	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451861	GCA_002329395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/395/GCA_002329395.1_ASM232939v1	28894102	-
Ruminococcaceae bacterium UBA1448	1952287	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.33195	52.1	-	DCTE01	227	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454359	GCA_002329405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/405/GCA_002329405.1_ASM232940v1	28894102	-
bacterium UBP9_UBA1432	1953448	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	3.88086	67.5	-	DCTU01	464	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453843	GCA_002329445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/445/GCA_002329445.1_ASM232944v1	28894102	-
Candidatus Woesebacteria bacterium UBA1430	1953387	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.594111	39.4	-	DCTW01	11	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453848	GCA_002329465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/465/GCA_002329465.1_ASM232946v1	28894102	-
Bacillales bacterium UBA1427	1950243	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.50143	42.9	-	DCTZ01	43	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456903	GCA_002329485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/485/GCA_002329485.1_ASM232948v1	28894102	-
Negativicutes bacterium UBA1444	1948702	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.87012	56	-	DCTI01	275	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456298	GCA_002329525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/525/GCA_002329525.1_ASM232952v1	28894102	-
Candidatus Omnitrophica bacterium UBA1443	1953259	PRJNA348753	348753	PVC group	Candidatus Omnitrophica	1.71567	50.2	-	DCTJ01	105	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454366	GCA_002329545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/545/GCA_002329545.1_ASM232954v1	28894102	-
Firmicutes bacterium UBA1440	1947937	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.48009	47.4	-	DCTM01	68	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451896	GCA_002329565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/565/GCA_002329565.1_ASM232956v1	28894102	-
bacterium UBP3_UBA1439	1953429	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	2.41471	68.7	-	DCTN01	211	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451854	GCA_002329605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/605/GCA_002329605.1_ASM232960v1	28894102	-
Firmicutes bacterium UBA1426	1947936	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.22857	46.2	-	DCUA01	236	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456902	GCA_002329675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/675/GCA_002329675.1_ASM232967v1	28894102	-
Bacillales bacterium UBA1424	1950242	PRJNA348753	348753	Terrabacteria group	Firmicutes	0.983821	45.9	-	DCUC01	76	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456900	GCA_002329705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/705/GCA_002329705.1_ASM232970v1	28894102	-
Firmicutes bacterium UBA2116	1947945	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.58291	35	-	DCYG01	48	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455336	GCA_002331025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/025/GCA_002331025.1_ASM233102v1	28894102	-
Candidatus Saccharibacteria bacterium UBA2112	1953324	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.901221	46.7	-	DCYK01	53	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455332	GCA_002331045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/045/GCA_002331045.1_ASM233104v1	28894102	-
Patescibacteria group bacterium UBA2106	1948792	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.699322	51.2	-	DCYQ01	39	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450588	GCA_002331125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/125/GCA_002331125.1_ASM233112v1	28894102	-
Patescibacteria group bacterium UBA2103	1948790	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.598171	43.1	-	DCYT01	6	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450593	GCA_002331145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/145/GCA_002331145.1_ASM233114v1	28894102	-
Patescibacteria group bacterium UBA2100	1948789	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.603278	41.3	-	DCYW01	40	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450594	GCA_002331185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/185/GCA_002331185.1_ASM233118v1	28894102	-
Methylocystaceae bacterium UBA2095	1952231	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	1.46184	47	-	DCZB01	77	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454935	GCA_002331235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/235/GCA_002331235.1_ASM233123v1	28894102	-
Acidimicrobiaceae bacterium UBA2093	1951339	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.66045	55.7	-	DCZD01	46	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454941	GCA_002331255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/255/GCA_002331255.1_ASM233125v1	28894102	-
Comamonadaceae bacterium UBA2121	1951599	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	4.44072	61.9	-	DCYB01	15	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450346	GCA_002331385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/385/GCA_002331385.1_ASM233138v1	28894102	-
Flavobacteriales bacterium UBA2113	1950973	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.21396	46	-	DCYJ01	36	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455331	GCA_002331425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/425/GCA_002331425.1_ASM233142v1	28894102	-
Flavobacteriales bacterium UBA2104	1950971	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.4108	37.6	-	DCYS01	40	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450590	GCA_002331485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/485/GCA_002331485.1_ASM233148v1	28894102	-
Patescibacteria group bacterium UBA2105	1948791	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.547651	47.4	-	DCYR01	24	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450591	GCA_002331495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/495/GCA_002331495.1_ASM233149v1	28894102	-
Flavobacteriales bacterium UBA2108	1950972	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.92033	39.6	-	DCYO01	161	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450586	GCA_002331745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/745/GCA_002331745.1_ASM233174v1	28894102	-
Planctomycetaceae bacterium UBA2092	1952730	PRJNA348753	348753	PVC group	Planctomycetes	3.6506	61	-	DCZE01	164	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454940	GCA_002331825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/825/GCA_002331825.1_ASM233182v1	28894102	-
Ruminococcaceae bacterium UBA2089	1952298	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.60675	40.5	-	DCZH01	191	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457476	GCA_002331845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/845/GCA_002331845.1_ASM233184v1	28894102	-
Enterobacteriaceae bacterium UBA2077	1951657	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.98334	56.4	-	DCZT01	28	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454685	GCA_002331915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/915/GCA_002331915.1_ASM233191v1	28894102	-
Flavobacteriales bacterium UBA2070	1950970	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.54787	43.1	-	DDAA01	11	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454682	GCA_002332505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/505/GCA_002332505.1_ASM233250v1	28894102	-
Sphingobacteriaceae bacterium UBA2059	1953078	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.45049	43.3	-	DDAL01	34	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452155	GCA_002332615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/615/GCA_002332615.1_ASM233261v1	28894102	-
Flavobacteriales bacterium UBA2040	1950969	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.10128	36.6	-	DDBE01	236	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456969	GCA_002332715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/715/GCA_002332715.1_ASM233271v1	28894102	-
Porticoccaceae bacterium UBA2039	1952752	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.08894	49.2	-	DDBF01	139	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451944	GCA_002332745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/745/GCA_002332745.1_ASM233274v1	28894102	-
Bacteroidales bacterium UBA2030	1950436	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.93745	42.9	-	DDBO01	238	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451951	GCA_002332755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/755/GCA_002332755.1_ASM233275v1	28894102	-
Clostridiales bacterium UBA2028	1950839	PRJNA348753	348753	Terrabacteria group	Firmicutes	4.25867	35.7	-	DDBQ01	216	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454472	GCA_002332765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/765/GCA_002332765.1_ASM233276v1	28894102	-
Anaerolineales bacterium UBA2029	1950189	PRJNA348753	348753	Terrabacteria group	Chloroflexi	3.88621	63.8	-	DDBP01	418	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454471	GCA_002332795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/795/GCA_002332795.1_ASM233279v1	28894102	-
Chthonomonas sp. UBA2025	1946327	PRJNA348753	348753	Terrabacteria group	Armatimonadetes	3.2947	62.1	-	DDBT01	119	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454467	GCA_002332845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/845/GCA_002332845.1_ASM233284v1	28894102	-
Oryzisolibacter propanilivorax	1527607	PRJEB16202	348956	Proteobacteria	Betaproteobacteria	3.71591	69.2	-	FNHP01	24	3417	3303	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428957	GCA_900103645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/645/GCA_900103645.1_IMG-taxon_2671180222_annotated_assembly	-	EPL6
Sphingomonas jeddahensis	1915074	PRJNA352204	352204	Proteobacteria	Alphaproteobacteria	3.11732	65.8	-	MPSB01	28	2906	2827	2/1/17	4/17/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05967815	GCA_001981525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/525/GCA_001981525.1_ASM198152v1	-	G39
Marispirochaeta aestuarii	1963862	PRJNA377394	377394	Spirochaetes	Spirochaetia	4.21669	53	-	MWQY01	79	3822	3739	4/11/17	4/13/17	Contig	"JNT University Hyderabad, India"	SAMN06461300	GCA_002087085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/085/GCA_002087085.1_ASM208708v1	-	JC444
Bifidobacterium vansinderenii	1984871	PRJNA385138	385138	Terrabacteria group	Actinobacteria	3.11101	62.5	-	NEWD01	68	2563	2374	7/27/17	8/1/17	Contig	University of Parma	SAMN06861210	GCA_002234915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/234/915/GCA_002234915.1_BbifTam10Bv1	-	Tam10B
Candidatus Moranbacteria bacterium UBA1302	1953296	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.639479	46	-	DBUA01	60	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06453963	GCA_002307715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/715/GCA_002307715.1_ASM230771v1	28894102	-
Alphaproteobacteria bacterium UBA1301	1948356	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.81682	61	-	DBUB01	18	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06453960	GCA_002307725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/725/GCA_002307725.1_ASM230772v1	28894102	-
Rhizobiaceae bacterium UBA1291	1953063	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.96632	61.7	-	DBUL01	265	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06454441	GCA_002307905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/905/GCA_002307905.1_ASM230790v1	28894102	-
Enterobacteriaceae bacterium UBA1293	1951648	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.04502	53.4	-	DBUJ01	125	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06450808	GCA_002307955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/955/GCA_002307955.1_ASM230795v1	28894102	-
Planctomycetaceae bacterium UBA1272	1952727	PRJNA348753	348753	PVC group	Planctomycetes	2.51051	48.1	-	DBVE01	238	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06450516	GCA_002308035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/035/GCA_002308035.1_ASM230803v1	28894102	-
Planctomycetaceae bacterium UBA1268	1952726	PRJNA348753	348753	PVC group	Planctomycetes	2.89078	48.3	-	DBVI01	303	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457619	GCA_002308055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/055/GCA_002308055.1_ASM230805v1	28894102	-
Alteromonadaceae bacterium UBA1282	1951381	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.48846	49	-	DBUU01	135	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06455764	GCA_002308075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/075/GCA_002308075.1_ASM230807v1	28894102	-
Acidimicrobiia bacterium UBA1281	1948316	PRJNA348753	348753	Terrabacteria group	Actinobacteria	0.776704	32.2	-	DBUV01	84	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06452552	GCA_002308095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/095/GCA_002308095.1_ASM230809v1	28894102	-
Lachnospiraceae bacterium UBA1267	1951975	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.3694	54.9	-	DBVJ01	148	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457613	GCA_002308115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/115/GCA_002308115.1_ASM230811v1	28894102	-
Bacteroidales bacterium UBA1266	1950404	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.5395	52.3	-	DBVK01	185	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457612	GCA_002308135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/135/GCA_002308135.1_ASM230813v1	28894102	-
Bacteroidales bacterium UBA1256	1950403	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.53692	47.4	-	DBVU01	111	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457805	GCA_002308195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/195/GCA_002308195.1_ASM230819v1	28894102	-
Lachnospiraceae bacterium UBA1258	1951974	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.15571	46.4	-	DBVS01	143	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457798	GCA_002308235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/235/GCA_002308235.1_ASM230823v1	28894102	-
Lachnospiraceae bacterium UBA1251	1951973	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.84621	53.5	-	DBVZ01	152	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457802	GCA_002308255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/255/GCA_002308255.1_ASM230825v1	28894102	-
Bacillales bacterium UBA1245	1950238	PRJNA348753	348753	Terrabacteria group	Firmicutes	0.658512	33.4	-	DBWF01	55	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06455241	GCA_002308275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/275/GCA_002308275.1_ASM230827v1	28894102	-
Porphyromonadaceae bacterium UBA1250	1952538	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.62427	48.6	-	DBWA01	180	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06456137	GCA_002308295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/295/GCA_002308295.1_ASM230829v1	28894102	-
Clostridiales bacterium UBA1246	1950812	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.85854	57.3	-	DBWE01	222	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06455242	GCA_002308315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/315/GCA_002308315.1_ASM230831v1	28894102	-
Proteobacteria bacterium UBA1280	1948134	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	1.71754	37.9	-	DBUW01	161	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06452551	GCA_002308345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/345/GCA_002308345.1_ASM230834v1	28894102	-
Gammaproteobacteria bacterium UBA1283	1948584	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.96236	54	-	DBUT01	178	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06455765	GCA_002308335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/335/GCA_002308335.1_ASM230833v1	28894102	-
Rhodobiaceae bacterium UBA1279	1952820	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	1.79362	53.6	-	DBUX01	115	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06456952	GCA_002308375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/375/GCA_002308375.1_ASM230837v1	28894102	-
Proteobacteria bacterium UBA1278	1948133	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	1.27346	43.5	-	DBUY01	77	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06456963	GCA_002308435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/435/GCA_002308435.1_ASM230843v1	28894102	-
Spirochaetales bacterium UBA1265	1951264	PRJNA348753	348753	Spirochaetes	Spirochaetia	1.2956	43.8	-	DBVL01	139	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457615	GCA_002308475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/475/GCA_002308475.1_ASM230847v1	28894102	-
Alphaproteobacteria bacterium UBA1254	1948354	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	0.854714	39.6	-	DBVW01	24	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457807	GCA_002308495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/495/GCA_002308495.1_ASM230849v1	28894102	-
Verrucomicrobia bacterium UBA1263	1948234	PRJNA348753	348753	PVC group	Verrucomicrobia	2.21337	49.7	-	DBVN01	118	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457609	GCA_002308515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/515/GCA_002308515.1_ASM230851v1	28894102	-
Bacillales bacterium UBA1261	1950239	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.18155	48.2	-	DBVP01	130	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457611	GCA_002308535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/535/GCA_002308535.1_ASM230853v1	28894102	-
bacterium UBP3_UBA1247	1953428	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	1.23063	58.2	-	DBWD01	157	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06455243	GCA_002308555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/555/GCA_002308555.1_ASM230855v1	28894102	-
Firmicutes bacterium UBA2058	1947944	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.28409	29.7	-	DDAM01	71	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452154	GCA_002332905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/905/GCA_002332905.1_ASM233290v1	28894102	-
Alphaproteobacteria bacterium UBA2041	1948367	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	1.92021	46.5	-	DDBD01	231	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456968	GCA_002333045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/045/GCA_002333045.1_ASM233304v1	28894102	-
Porticoccaceae bacterium UBA2036	1952751	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.24157	50	-	DDBI01	62	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451945	GCA_002333065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/065/GCA_002333065.1_ASM233306v1	28894102	-
Cellvibrionales bacterium UBA2034	1950787	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.23985	51.3	-	DDBK01	193	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451947	GCA_002333095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/095/GCA_002333095.1_ASM233309v1	28894102	-
Flavobacteriales bacterium UBA2035	1950968	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.7093	52	-	DDBJ01	72	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451948	GCA_002333085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/085/GCA_002333085.1_ASM233308v1	28894102	-
Moraxellaceae bacterium UBA2032	1952264	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.56443	41.3	-	DDBM01	282	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451949	GCA_002333125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/125/GCA_002333125.1_ASM233312v1	28894102	-
Moraxellaceae bacterium UBA2031	1952263	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.15764	53.1	-	DDBN01	154	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451952	GCA_002333145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/145/GCA_002333145.1_ASM233314v1	28894102	-
Enterobacteriaceae bacterium UBA2068	1951656	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.27097	54	-	DDAC01	64	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457249	GCA_002333165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/165/GCA_002333165.1_ASM233316v1	28894102	-
Bacteroidetes bacterium UBA2024	1950762	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.15358	46	-	DDBU01	168	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453721	GCA_002333175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/175/GCA_002333175.1_ASM233317v1	28894102	-
Micrococcales bacterium UBA2037	1951164	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.26212	52.9	-	DDBH01	24	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451946	GCA_002333405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/405/GCA_002333405.1_ASM233340v1	28894102	-
Leptospiraceae bacterium UBA2033	1952201	PRJNA348753	348753	Spirochaetes	Spirochaetia	5.25818	34.7	-	DDBL01	257	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451950	GCA_002333425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/425/GCA_002333425.1_ASM233342v1	28894102	-
Proteobacteria bacterium UBA2008	1948142	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	2.72044	52.2	-	DDCK01	84	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454198	GCA_002334905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/905/GCA_002334905.1_ASM233490v1	28894102	-
Enterobacteriaceae bacterium UBA2004	1951655	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.31153	55.6	-	DDCO01	32	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454192	GCA_002334895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/895/GCA_002334895.1_ASM233489v1	28894102	-
Porticoccaceae bacterium UBA2002	1952750	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.03731	50.9	-	DDCQ01	111	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454194	GCA_002334915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/915/GCA_002334915.1_ASM233491v1	28894102	-
Verrucomicrobiaceae bacterium UBA2021	1952940	PRJNA348753	348753	PVC group	Verrucomicrobia	5.21491	62.7	-	DDBX01	424	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454463	GCA_002334885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/885/GCA_002334885.1_ASM233488v1	28894102	-
Rhodospirillaceae bacterium UBA1999	1952850	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.32302	49.4	-	DDCT01	187	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456606	GCA_002334965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/965/GCA_002334965.1_ASM233496v1	28894102	-
Flavobacteriaceae bacterium UBA1998	1951809	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.52705	40.5	-	DDCU01	135	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456605	GCA_002334975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/975/GCA_002334975.1_ASM233497v1	28894102	-
Thiothrix sp. UBA2016	1947695	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.69187	53.5	-	DDCC01	48	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451671	GCA_002335025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/025/GCA_002335025.1_ASM233502v1	28894102	-
Candidatus Ruthia sp. UBA2013	1946226	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	1.20177	38.8	-	DDCF01	39	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451676	GCA_002335045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/045/GCA_002335045.1_ASM233504v1	28894102	-
Pseudomonadaceae bacterium UBA2007	1952771	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.07238	61.5	-	DDCL01	37	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454189	GCA_002335085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/085/GCA_002335085.1_ASM233508v1	28894102	-
Oceanospirillaceae bacterium UBA2001	1952988	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.44549	45.3	-	DDCR01	201	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454195	GCA_002335115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/115/GCA_002335115.1_ASM233511v1	28894102	-
Patescibacteria group bacterium UBA2023	1948788	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	1.10435	53.3	-	DDBV01	38	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454465	GCA_002335145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/145/GCA_002335145.1_ASM233514v1	28894102	-
Flammeovirgaceae bacterium UBA2019	1951772	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.26524	43.3	-	DDBZ01	58	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451678	GCA_002335165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/165/GCA_002335165.1_ASM233516v1	28894102	-
Candidatus Saccharibacteria bacterium UBA2018	1953323	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.875335	49.9	-	DDCA01	3	-	-	9/21/17	9/21/17	Contig	University of Queensland	SAMN06451677	GCA_002335175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/175/GCA_002335175.1_ASM233517v1	28894102	-
Pseudomonadaceae bacterium UBA2015	1952772	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.99998	61.4	-	DDCD01	55	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451670	GCA_002335205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/205/GCA_002335205.1_ASM233520v1	28894102	-
Erythrobacteraceae bacterium UBA2014	1951752	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.34687	59.6	-	DDCE01	75	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451669	GCA_002335225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/225/GCA_002335225.1_ASM233522v1	28894102	-
Patescibacteria group bacterium UBA1449	1948776	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	1.19262	40.4	-	DCTD01	113	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454360	GCA_002335355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/355/GCA_002335355.1_ASM233535v1	28894102	-
Flavobacteriaceae bacterium UBA2000	1951810	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.72731	43.3	-	DDCS01	192	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454196	GCA_002335345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/345/GCA_002335345.1_ASM233534v1	28894102	-
Candidatus Aminicenantes bacterium UBA2190	1953191	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	2.95321	62.7	-	DCVK01	72	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456378	GCA_002335385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/385/GCA_002335385.1_ASM233538v1	28894102	-
Dehalococcoidia bacterium UBA2162	1948482	PRJNA348753	348753	Terrabacteria group	Chloroflexi	0.932962	48.2	-	DCWM01	63	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450828	GCA_002335405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/405/GCA_002335405.1_ASM233540v1	28894102	-
Lebetimonas natsushimae	1936991	PRJDB5514	402013	Proteobacteria	delta/epsilon subdivisions	1.63906	30.4	-	BDME01	8	1733	1686	9/6/17	9/23/17	Contig	"Department of Subsurface Geobiological Analysis and Research, Japan Agency for Marine-Earth Science and Technology"	SAMD00074283	GCA_002335445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/445/GCA_002335445.1_ASM233544v1	28690052	HS1857
Candidatus Dojkabacteria bacterium UBA2022	1953392	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.816305	37.9	-	DDBW01	22	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454466	GCA_002335495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/495/GCA_002335495.1_ASM233549v1	28894102	-
Effusibacillus lacus	1348429	PRJDB5819	407309	Terrabacteria group	Firmicutes	3.90805	49.6	-	BDUF01	127	3623	3692	9/13/17	9/23/17	Scaffold	"The Institute of Low Temperature Science, Hokkaido University"	SAMD00081395	GCA_002335525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/525/GCA_002335525.1_ASM233552v1	-	skLN1
Brucella suis bv. 2	645170	PRJNA242205	242205	Proteobacteria	Alphaproteobacteria	3.32454	57.1841	chromosome I:NZ_CP007695.1/CP007695.1; chromosome II:NZ_CP007696.1/CP007696.1	-	2	3382	3162	6/6/14	4/2/17	Complete Genome	"National Institute for Agrarian and Veterinary Research, P.I. & BioFIG - Center for Biodiversity Functional & Integrative Genomics Faculty of Sciences"	SAMN02691711	GCA_000699025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/025/GCA_000699025.1_ASM69902v1	24994794	Bs143CITA
Elstera cyanobacteriorum	2022747	PRJNA395831	395831	Proteobacteria	Alphaproteobacteria	3.95013	62.4	-	NOXS01	35	3801	3707	8/14/17	8/16/17	Scaffold	Nanjing Institute of Geography and Limnology	SAMN07414919	GCA_002251735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/735/GCA_002251735.1_ASM225173v1	-	TH019
Sphingomonas spermidinifaciens	1141889	PRJNA407472	407472	Proteobacteria	Alphaproteobacteria	3.63569	68	-	NWMW01	5	3463	3376	9/24/17	9/24/17	Contig	Guangdong Institute of Microbiology	SAMN07655754	GCA_002351485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/351/485/GCA_002351485.1_ASM235148v1	-	9NM-10
Wohlfahrtiimonas populi	1940240	PRJNA368976	368976	Proteobacteria	Gammaproteobacteria	2.77604	37.1	-	MVDN01	74	2789	2646	2/24/17	2/27/17	Contig	Research Institute of Forest Ecology Environment and Protection	SAMN06322269	GCA_002006795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/795/GCA_002006795.1_ASM200679v1	-	34C10-3-10
Lactococcus petauri	1940789	PRJNA369280	369280	Terrabacteria group	Firmicutes	2.39718	37.7	-	MUIZ01	59	2344	2228	5/22/17	5/30/17	Contig	Cornell University	SAMN06284381	GCA_002154895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/895/GCA_002154895.1_ASM215489v1	-	159469
Clostridiales bacterium UBA2820	1950843	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.14341	51.1	-	DEGS01	39	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451170	GCA_002351545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/351/545/GCA_002351545.1_ASM235154v1	28894102	-
Bacteroidales bacterium UBA2817	1950460	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.48156	48	-	DEGV01	151	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451524	GCA_002351585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/351/585/GCA_002351585.1_ASM235158v1	28894102	-
Lachnospiraceae bacterium UBA2815	1951993	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.80172	51.9	-	DEGX01	74	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06455935	GCA_002351605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/351/605/GCA_002351605.1_ASM235160v1	28894102	-
Lachnospiraceae bacterium UBA2816	1951994	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.87501	56.9	-	DEGW01	166	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06455936	GCA_002351595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/351/595/GCA_002351595.1_ASM235159v1	28894102	-
Cyanobacteria bacterium UBA2813	1947877	PRJNA348753	348753	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.04813	33.3	-	DEGZ01	39	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06455941	GCA_002351645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/351/645/GCA_002351645.1_ASM235164v1	28894102	-
Acidaminococcaceae bacterium UBA2812	1951335	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.92758	59.1	-	DEHA01	43	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451527	GCA_002351665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/351/665/GCA_002351665.1_ASM235166v1	28894102	-
Gammaproteobacteria bacterium UBA2810	1948599	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.30431	57.3	-	DEHC01	90	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06455938	GCA_002351705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/351/705/GCA_002351705.1_ASM235170v1	28894102	-
Verrucomicrobia bacterium UBA2808	1948247	PRJNA348753	348753	PVC group	Verrucomicrobia	2.25568	62.9	-	DEHE01	179	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06450901	GCA_002351765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/351/765/GCA_002351765.1_ASM235176v1	28894102	-
Porphyromonadaceae bacterium UBA2807	1952544	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.11152	46	-	DEHF01	99	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06450902	GCA_002351785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/351/785/GCA_002351785.1_ASM235178v1	28894102	-
Bacteroidales bacterium UBA2805	1950459	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.5417	41.3	-	DEHH01	25	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06450504	GCA_002351805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/351/805/GCA_002351805.1_ASM235180v1	28894102	-
Ruminococcaceae bacterium UBA2806	1952302	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.30195	41.4	-	DEHG01	157	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06450491	GCA_002351795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/351/795/GCA_002351795.1_ASM235179v1	28894102	-
Gammaproteobacteria bacterium UBA2804	1948598	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.04752	43.7	-	DEHI01	148	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06452715	GCA_002351865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/351/865/GCA_002351865.1_ASM235186v1	28894102	-
Ruminococcaceae bacterium UBA2801	1952301	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.79618	56.3	-	DEHL01	142	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06452725	GCA_002351895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/351/895/GCA_002351895.1_ASM235189v1	28894102	-
Bacteroidales bacterium UBA2800	1950458	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.78596	52.2	-	DEHM01	26	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06452727	GCA_002351925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/351/925/GCA_002351925.1_ASM235192v1	28894102	-
Ignavibacteria bacterium UBA2799	1948675	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.29259	39.8	-	DEHN01	205	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06455048	GCA_002351945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/351/945/GCA_002351945.1_ASM235194v1	28894102	-
Flavobacteriales bacterium UBA2798	1950983	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.768	41.8	-	DEHO01	82	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06455049	GCA_002351955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/351/955/GCA_002351955.1_ASM235195v1	28894102	-
Saprospiraceae bacterium UBA2797	1952877	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.91122	52.7	-	DEHP01	471	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06455044	GCA_002351985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/351/985/GCA_002351985.1_ASM235198v1	28894102	-
Lachnospiraceae bacterium UBA2818	1951995	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.01482	50.3	-	DEGU01	109	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06455932	GCA_002351995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/351/995/GCA_002351995.1_ASM235199v1	28894102	-
Bacteroidetes bacterium UBA2795	1953153	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.95694	36.8	-	DEHR01	236	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06455046	GCA_002352025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/025/GCA_002352025.1_ASM235202v1	28894102	-
Anaerolineales bacterium UBA2796	1950201	PRJNA348753	348753	Terrabacteria group	Chloroflexi	4.18051	56.9	-	DEHQ01	292	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06455045	GCA_002352035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/035/GCA_002352035.1_ASM235203v1	28894102	-
Legionellaceae bacterium UBA2794	1952196	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.51848	38.1	-	DEHS01	112	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06455710	GCA_002352055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/055/GCA_002352055.1_ASM235205v1	28894102	-
Chitinophagaceae bacterium UBA2793	1951553	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.46319	37.6	-	DEHT01	109	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06455040	GCA_002352045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/045/GCA_002352045.1_ASM235204v1	28894102	-
Chitinophagaceae bacterium UBA2791	1951552	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.19385	48.3	-	DEHV01	82	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06455042	GCA_002352105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/105/GCA_002352105.1_ASM235210v1	28894102	-
Xanthomonadales bacterium UBA2790	1951297	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.96954	61.6	-	DEHW01	246	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06455043	GCA_002352135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/135/GCA_002352135.1_ASM235213v1	28894102	-
Chitinophagaceae bacterium UBA2789	1951551	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.44814	41.6	-	DEHX01	183	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06457882	GCA_002352145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/145/GCA_002352145.1_ASM235214v1	28894102	-
Competibacteraceae bacterium UBA2792	1951620	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.59297	59.8	-	DEHU01	316	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06455041	GCA_002352125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/125/GCA_002352125.1_ASM235212v1	28894102	-
Competibacteraceae bacterium UBA2788	1951619	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.2005	60.5	-	DEHY01	234	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06457881	GCA_002352185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/185/GCA_002352185.1_ASM235218v1	28894102	-
Flammeovirgaceae bacterium UBA2786	1951781	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.86003	42.2	-	DEIA01	90	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06457879	GCA_002352225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/225/GCA_002352225.1_ASM235222v1	28894102	-
Competibacteraceae bacterium UBA2782	1951618	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.2015	61.2	-	DEIE01	389	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06457875	GCA_002352275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/275/GCA_002352275.1_ASM235227v1	28894102	-
Alphaproteobacteria bacterium UBA2784	1948371	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.62531	62.2	-	DEIC01	134	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06457877	GCA_002352285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/285/GCA_002352285.1_ASM235228v1	28894102	-
Bacteroidales bacterium UBA2781	1950457	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.18551	56.5	-	DEIF01	168	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06457874	GCA_002352305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/305/GCA_002352305.1_ASM235230v1	28894102	-
Methylococcaceae bacterium UBA2780	1952221	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.37473	44.9	-	DEIG01	25	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06457873	GCA_002352345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/345/GCA_002352345.1_ASM235234v1	28894102	-
Methylococcaceae bacterium UBA2778	1952220	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.93291	55.6	-	DEII01	253	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451510	GCA_002352385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/385/GCA_002352385.1_ASM235238v1	28894102	-
Dehalococcoidia bacterium UBA2777	1948487	PRJNA348753	348753	Terrabacteria group	Chloroflexi	1.82305	49	-	DEIJ01	175	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451507	GCA_002352365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/365/GCA_002352365.1_ASM235236v1	28894102	-
Rhodobacteraceae bacterium UBA2776	1952801	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.19792	54.9	-	DEIK01	133	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451508	GCA_002352425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/425/GCA_002352425.1_ASM235242v1	28894102	-
Desulfobulbaceae bacterium UBA2775	1961549	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	4.21454	44.8	-	DEIL01	331	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451505	GCA_002352445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/445/GCA_002352445.1_ASM235244v1	28894102	-
Patescibacteria group bacterium UBA2773	1948805	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.886769	32	-	DEIN01	17	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451503	GCA_002352465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/465/GCA_002352465.1_ASM235246v1	28894102	-
Candidatus Dadabacteria bacterium UBA2774	1953209	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	2.48155	45.4	-	DEIM01	250	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451506	GCA_002352485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/485/GCA_002352485.1_ASM235248v1	28894102	-
Patescibacteria group bacterium UBA2772	1948804	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	1.20171	33.6	-	DEIO01	31	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451504	GCA_002352545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/545/GCA_002352545.1_ASM235254v1	28894102	-
Proteobacteria bacterium UBA2770	1948155	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	2.2474	50.1	-	DEIQ01	129	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451502	GCA_002352565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/565/GCA_002352565.1_ASM235256v1	28894102	-
Desulfobacteraceae bacterium UBA2771	1961533	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	3.03225	53.9	-	DEIP01	196	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451501	GCA_002352605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/605/GCA_002352605.1_ASM235260v1	28894102	-
Dehalococcoidia bacterium UBA2768	1948486	PRJNA348753	348753	Terrabacteria group	Chloroflexi	1.17775	49	-	DEIS01	88	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06454301	GCA_002352625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/625/GCA_002352625.1_ASM235262v1	28894102	-
Hyphomicrobiaceae bacterium UBA2767	1951935	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	4.10161	56.1	-	DEIT01	256	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06454304	GCA_002352635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/635/GCA_002352635.1_ASM235263v1	28894102	-
Flavobacteriaceae bacterium UBA2765	1951817	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.98129	31.2	-	DEIV01	155	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06454306	GCA_002352665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/665/GCA_002352665.1_ASM235266v1	28894102	-
Acidimicrobiia bacterium UBA2766	1948317	PRJNA348753	348753	Terrabacteria group	Actinobacteria	3.77802	53.8	-	DEIU01	109	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06454303	GCA_002352645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/645/GCA_002352645.1_ASM235264v1	28894102	-
Bacteroidales bacterium UBA2764	1950456	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.10833	47.4	-	DEIW01	208	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06454305	GCA_002352705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/705/GCA_002352705.1_ASM235270v1	28894102	-
Cyanobacteria bacterium UBA2819	1947878	PRJNA348753	348753	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.95476	34.4	-	DEGT01	35	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06455933	GCA_002352745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/745/GCA_002352745.1_ASM235274v1	28894102	-
Firmicutes bacterium UBA1874	1947943	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.57973	41.8	-	DDHO01	103	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06453997	GCA_002352935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/935/GCA_002352935.1_ASM235293v1	28894102	-
Campylobacteraceae bacterium UBA1877	1951531	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	1.94393	35.7	-	DDHL01	121	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06453994	GCA_002352945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/945/GCA_002352945.1_ASM235294v1	28894102	-
Prevotellaceae bacterium UBA2760	1952474	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.30462	46.8	-	DEJA01	31	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06454309	GCA_002353115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/115/GCA_002353115.1_ASM235311v1	28894102	-
Bacteroidales bacterium UBA2759	1950455	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.13597	58.5	-	DEJB01	260	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06453249	GCA_002353135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/135/GCA_002353135.1_ASM235313v1	28894102	-
Prevotellaceae bacterium UBA2761	1952475	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.24642	47	-	DEIZ01	93	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06454310	GCA_002353145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/145/GCA_002353145.1_ASM235314v1	28894102	-
Prevotellaceae bacterium UBA2757	1952473	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.46877	44.2	-	DEJD01	126	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06453238	GCA_002353215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/215/GCA_002353215.1_ASM235321v1	28894102	-
Bacillales bacterium UBA2753	1950254	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.26452	33.4	-	DEJH01	94	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06453242	GCA_002353275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/275/GCA_002353275.1_ASM235327v1	28894102	-
Porphyromonadaceae bacterium UBA2751	1952543	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.39655	49.4	-	DEJJ01	35	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06453244	GCA_002353285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/285/GCA_002353285.1_ASM235328v1	28894102	-
Prevotellaceae bacterium UBA2752	1952472	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.55664	50.3	-	DEJI01	127	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06456519	GCA_002353305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/305/GCA_002353305.1_ASM235330v1	28894102	-
Bacteroidales bacterium UBA2748	1950454	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.74439	54.6	-	DEJM01	65	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06454048	GCA_002353375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/375/GCA_002353375.1_ASM235337v1	28894102	-
Prevotellaceae bacterium UBA2749	1952471	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.5585	50.4	-	DEJL01	193	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06454049	GCA_002353385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/385/GCA_002353385.1_ASM235338v1	28894102	-
Porphyromonadaceae bacterium UBA2741	1952542	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.24287	50.3	-	DEJT01	213	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06454043	GCA_002353475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/475/GCA_002353475.1_ASM235347v1	28894102	-
Prevotellaceae bacterium UBA2738	1952469	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.11212	47	-	DEJW01	49	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06452052	GCA_002353585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/585/GCA_002353585.1_ASM235358v1	28894102	-
Prevotellaceae bacterium UBA2744	1952470	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.39099	46.8	-	DEJQ01	36	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06452190	GCA_002353575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/575/GCA_002353575.1_ASM235357v1	28894102	-
Prevotellaceae bacterium UBA2736	1952468	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.15299	47.6	-	DEJY01	37	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06457309	GCA_002353615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/615/GCA_002353615.1_ASM235361v1	28894102	-
Lachnospiraceae bacterium UBA2734	1951992	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.00594	53.6	-	DEKA01	55	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06452043	GCA_002353635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/635/GCA_002353635.1_ASM235363v1	28894102	-
Lachnospiraceae bacterium UBA2731	1951991	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.00319	57.5	-	DEKD01	137	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06452046	GCA_002353755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/755/GCA_002353755.1_ASM235375v1	28894102	-
Lachnospiraceae bacterium UBA2727	1951990	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.1255	46.8	-	DEKH01	40	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06457126	GCA_002353765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/765/GCA_002353765.1_ASM235376v1	28894102	-
Bifidobacteriaceae bacterium UBA2724	1951521	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.06837	63.4	-	DEKK01	18	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06457127	GCA_002353815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/815/GCA_002353815.1_ASM235381v1	28894102	-
Alphaproteobacteria bacterium UBA2723	1948370	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	1.61033	39	-	DEKL01	138	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06457122	GCA_002353835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/835/GCA_002353835.1_ASM235383v1	28894102	-
Bacteroidales bacterium UBA2722	1950453	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.86901	42.1	-	DEKM01	105	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06457121	GCA_002353875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/875/GCA_002353875.1_ASM235387v1	28894102	-
Porphyromonadaceae bacterium UBA2720	1952541	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.19302	53.3	-	DEKO01	224	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06457123	GCA_002353885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/885/GCA_002353885.1_ASM235388v1	28894102	-
Bacteroidales bacterium UBA2721	1950452	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.76032	47.2	-	DEKN01	124	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06457124	GCA_002353895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/895/GCA_002353895.1_ASM235389v1	28894102	-
Ruminococcaceae bacterium UBA2719	1952300	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.41116	37.4	-	DEKP01	45	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451790	GCA_002353935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/935/GCA_002353935.1_ASM235393v1	28894102	-
Bacteroidales bacterium UBA2717	1950451	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.49597	58.8	-	DEKR01	297	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451797	GCA_002353945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/945/GCA_002353945.1_ASM235394v1	28894102	-
Prevotellaceae bacterium UBA2718	1952467	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.36133	50.7	-	DEKQ01	176	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451791	GCA_002353975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/975/GCA_002353975.1_ASM235397v1	28894102	-
Porphyromonadaceae bacterium UBA2715	1952540	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.79861	47.2	-	DEKT01	75	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451799	GCA_002353995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/995/GCA_002353995.1_ASM235399v1	28894102	-
Bacteroidales bacterium UBA2716	1950450	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.25059	55.8	-	DEKS01	196	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451798	GCA_002354005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/005/GCA_002354005.1_ASM235400v1	28894102	-
Bacteroidales bacterium UBA2714	1950449	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.80821	54.4	-	DEKU01	71	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451800	GCA_002354035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/035/GCA_002354035.1_ASM235403v1	28894102	-
Bacteroidales bacterium UBA2712	1950448	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.21944	49.9	-	DEKW01	21	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451794	GCA_002354055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/055/GCA_002354055.1_ASM235405v1	28894102	-
Prevotellaceae bacterium UBA2713	1952466	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.98663	46.3	-	DEKV01	40	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451793	GCA_002354065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/065/GCA_002354065.1_ASM235406v1	28894102	-
Enterobacteriaceae bacterium UBA2706	1951665	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.09156	57.1	-	DELC01	29	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06454564	GCA_002354195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/195/GCA_002354195.1_ASM235419v1	28894102	-
Balneolaceae bacterium UBA2695	1951493	PRJNA348753	348753	Balneolaeota	Balneolia	3.24252	37.3	-	DELN01	20	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451358	GCA_002354425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/425/GCA_002354425.1_ASM235442v1	28894102	-
Sphingomonadales bacterium UBA2683	1951256	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.32295	57.8	-	DELZ01	5	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06453894	GCA_002354635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/635/GCA_002354635.1_ASM235463v1	28894102	-
Gammaproteobacteria bacterium UBA2679	1948597	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.38886	56	-	DEMD01	16	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06452579	GCA_002354735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/735/GCA_002354735.1_ASM235473v1	28894102	-
Flavobacteriaceae bacterium UBA2677	1951816	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.14834	40.2	-	DEMF01	15	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06452587	GCA_002354765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/765/GCA_002354765.1_ASM235476v1	28894102	-
Balneolaceae bacterium UBA2676	1951492	PRJNA348753	348753	Balneolaeota	Balneolia	3.25143	37.5	-	DEMG01	13	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06452586	GCA_002354795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/795/GCA_002354795.1_ASM235479v1	28894102	-
Gammaproteobacteria bacterium UBA2675	1948596	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.51415	55.3	-	DEMH01	15	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06452585	GCA_002354805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/805/GCA_002354805.1_ASM235480v1	28894102	-
Flavobacteriaceae bacterium UBA2674	1951815	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.92471	35.9	-	DEMI01	67	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06452584	GCA_002354835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/835/GCA_002354835.1_ASM235483v1	28894102	-
Brucella suis bv. 2	645170	PRJNA241449	241449	Proteobacteria	Alphaproteobacteria	3.32477	57.1841	chromosome I:NZ_CP007691.1/CP007691.1; chromosome II:NZ_CP007692.1/CP007692.1	-	2	3387	3162	6/5/14	4/2/17	Complete Genome	"National Institute for Agrarian and Veterinary Research, PI & BioFIG - Center for Biodiversity Functional & Integrative Genomics, Faculty of Sciences"	SAMN02689927	GCA_000698245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/245/GCA_000698245.1_ASM69824v1	24994794	PT09143
Bacillales bacterium UBA2730	1950253	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.19819	27	-	DEKE01	56	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06452047	GCA_002355235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/235/GCA_002355235.1_ASM235523v1	28894102	-
Brucella suis bv. 2	645170	PRJNA242123	242123	Proteobacteria	Alphaproteobacteria	3.32504	57.1841	chromosome I:NZ_CP007693.1/CP007693.1; chromosome II:NZ_CP007694.1/CP007694.1	-	2	3385	3162	6/5/14	4/2/17	Complete Genome	"National Institute for Agrarian and Veterinary Research, P.I. & BioFIG - Center for Biodiversity Functional & Integrative Genomics Faculty of Sciences"	SAMN02690837	GCA_000698285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/285/GCA_000698285.1_ASM69828v1	24994794	PT09172
Klebsiella pneumoniae	573	PRJNA296771	296771	Proteobacteria	Gammaproteobacteria	5.48385	57.1811	chromosome:NZ_CP016926.1/CP016926.1; plasmid unnamed1:NZ_CP016927.1/CP016927.1; plasmid unnamed1:NZ_CP016924.1/CP016924.1; plasmid unnamed2:NZ_CP016925.1/CP016925.1	-	4	5446	5179	8/23/16	2/21/17	Complete Genome	Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion	SAMN04448241	GCA_001709295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/295/GCA_001709295.1_ASM170929v1	-	-
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA248880	248880	Proteobacteria	Gammaproteobacteria	5.5206	57.1769	chromosome:NZ_CP009863.1/CP009863.1; plasmid pKPC-e4e:NZ_CP009864.1/CP009864.1; plasmid pKPN-80a:NZ_CP009865.1/CP009865.1	-	3	5543	5239	11/17/14	2/21/17	Complete Genome	NIH	SAMN02803823	GCA_000784945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/945/GCA_000784945.1_ASM78494v1	25232178	KPNIH29
Brucella melitensis	29459	PRJNA338470	338470	Proteobacteria	Alphaproteobacteria	3.30987	57.1717	chromosome 1:NZ_CP016983.1/CP016983.1; chromosome 2:NZ_CP016984.1/CP016984.1	-	2	3379	3125	8/29/16	4/5/17	Complete Genome	Viginia Tech	SAMN05559134	GCA_001715485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/485/GCA_001715485.1_ASM171548v1	-	2008724259
Brucella melitensis	29459	PRJNA398310	398310	Proteobacteria	Alphaproteobacteria	3.31267	57.1715	chromosome 1:NZ_CP022875.1/CP022875.1; chromosome 2:NZ_CP022876.1/CP022876.1	-	2	3385	3146	8/22/17	8/24/17	Complete Genome	China Agricultural University	SAMN07508058	GCA_002263015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/015/GCA_002263015.1_ASM226301v1	-	BL
Brucella ceti TE28753-12	1407053	PRJNA227567	227567	Proteobacteria	Alphaproteobacteria	3.27754	57.1708	chromosome I:CP006898.1; chromosome II:CP006899.1	-	2	2477	2376	11/25/13	8/7/14	Complete Genome	CRS4	SAMN02371861	GCA_000590815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/815/GCA_000590815.1_ASM59081v1	-	TE28753-12
Brucella abortus	235	PRJNA243872	243872	Proteobacteria	Alphaproteobacteria	3.2895	57.1706	chromosome 1:NZ_CP007681.1/CP007681.1; chromosome 2:NZ_CP007680.1/CP007680.1	-	2	3392	3171	8/15/14	3/24/17	Complete Genome	Los Alamos National Laboratory	SAMN02767917	GCA_000740135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/135/GCA_000740135.1_ASM74013v1	25237024	BDW
Klebsiella pneumoniae	573	PRJNA396009	396009	Proteobacteria	Gammaproteobacteria	5.62195	57.1666	chromosome:NZ_CP022573.1/CP022573.1; plasmid pBIC-1a:NZ_CP022574.1/CP022574.1; plasmid pBIC-1b:NZ_CP022575.1/CP022575.1; plasmid pBIC-1c:NZ_CP022576.1/CP022576.1	-	4	5744	5492	8/8/17	8/10/17	Complete Genome	"Faculte de Medecine, Universite Paris-Sud"	SAMN07419044	GCA_002243445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/445/GCA_002243445.1_ASM224344v1	-	BIC-1
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	272620	PRJNA31	31	Proteobacteria	Gammaproteobacteria	5.69489	57.1666	chromosome:NC_009648.1/CP000647.1; plasmid pKPN3:NC_009649.1/CP000648.1; plasmid pKPN4:NC_009650.1/CP000649.1; plasmid pKPN5:NC_009651.1/CP000650.1; plasmid pKPN6:NC_009652.1/CP000651.1; plasmid pKPN7:NC_009653.1/CP000652.1	-	6	5716	5420	7/5/07	2/21/17	Complete Genome	The Klebsiella pneumoniae Genome Sequencing Project	SAMN02603941	GCA_000016305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/305/GCA_000016305.1_ASM1630v1	11677609	ATCC 700721; MGH 78578
Klebsiella pneumoniae	573	PRJNA321635	321635	Proteobacteria	Gammaproteobacteria	5.49547	57.1624	chromosome:NZ_CP016159.1/CP016159.1; plasmid unnamed1:NZ_CP016160.1/CP016160.1; plasmid unnamed2:NZ_CP016161.1/CP016161.1	-	3	5440	5187	6/27/16	2/22/17	Complete Genome	Institute of Disease Control and Prevention	SAMN05170048	GCA_001676825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/825/GCA_001676825.1_ASM167682v1	-	TH1
Klebsiella pneumoniae	573	PRJNA321220	321220	Proteobacteria	Gammaproteobacteria	5.49548	57.1624	chromosome:NZ_CP015753.1/CP015753.1; plasmid unnamed1:NZ_CP015754.1/CP015754.1; plasmid unnamed2:NZ_CP015755.1/CP015755.1	-	3	5443	5186	5/18/16	2/25/17	Complete Genome	Institute of Disease Control and Prevention	SAMN04992856	GCA_001646625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/646/625/GCA_001646625.1_ASM164662v1	-	W14
Brucella sp. 141012304	1885919	PRJEB15074	337996	Proteobacteria	Alphaproteobacteria	3.44238	57.1623	chromosome 1:NZ_LT605585.1/LT605585.1; chromosome 2:NZ_LT605586.1/LT605586.1	-	2	3438	3152	10/13/16	4/13/17	Complete Genome	JLU	SAMEA4378174	GCA_900095155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/155/GCA_900095155.1_BR141012304v1	-	141012304
Klebsiella pneumoniae	573	PRJNA329409	329409	Proteobacteria	Gammaproteobacteria	5.77858	57.1601	chromosome:NZ_CP018364.1/CP018364.1; plasmid pKp_Goe_629-1:NZ_CP018365.1/CP018365.1; plasmid pKp_Goe_629-2:NZ_CP018366.1/CP018366.1	-	3	5901	5607	12/13/16	2/21/17	Complete Genome	University Medical Center Goettingen	SAMN05412811	GCA_001902355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/355/GCA_001902355.1_ASM190235v1	-	Kp_Goe_62629
Klebsiella pneumoniae 30660/NJST258_1	1420012	PRJNA226698	226698	Proteobacteria	Gammaproteobacteria	5.54094	57.146	chromosome:NZ_CP006923.1/CP006923.1; plasmid pNJST258N1:NZ_CP006927.1/CP006927.1; plasmid pNJST258N2:NZ_CP006926.1/CP006926.1; plasmid pNJST258N3:NZ_CP006925.1/CP006925.1; plasmid pNJST258N4:NZ_CP006928.1/CP006928.1; plasmid pNJST258N5:NZ_CP006924.1/CP006924.1	-	6	5608	5342	3/19/14	2/21/17	Complete Genome	Igenbio Inc	SAMN03081502	GCA_000598005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/005/GCA_000598005.1_ASM59800v1	24639510	30660/NJST258_1
Klebsiella pneumoniae subsp. pneumoniae KPNIH10	1094170	PRJNA73843	73843	Proteobacteria	Gammaproteobacteria	5.76782	57.1433	chromosome:NZ_CP007727.1/CP007727.1; plasmid pAAC154-a50:NZ_CP007728.1/CP007728.1; plasmid pKPN-498:NZ_CP007729.1/CP007729.1; plasmid pKpQIL-6e6:NZ_CP007730.1/CP007730.1	-	4	5908	5653	5/27/14	2/21/17	Complete Genome	NISC	SAMN01057614	GCA_000281435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/435/GCA_000281435.2_ASM28143v2	22914622	KPNIH10
Klebsiella pneumoniae subsp. pneumoniae KPNIH1	1087440	PRJNA73191	73191	Proteobacteria	Gammaproteobacteria	5.76661	57.1432	chromosome:NZ_CP008827.1/CP008827.1; plasmid pAAC154-a50:NZ_CP008828.1/CP008828.1; plasmid pKPN-498:NZ_CP008829.1/CP008829.1; plasmid pKpQIL-6e6:NZ_CP008830.1/CP008830.1	-	4	5907	5654	7/2/14	2/21/17	Complete Genome	NIH Intramural Sequencing Center	SAMN01057611	GCA_000281535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/535/GCA_000281535.2_ASM28153v2	22914622	KPNIH1
Klebsiella pneumoniae	573	PRJNA246471	246471	Proteobacteria	Gammaproteobacteria	5.62052	57.1393	chromosome:NZ_CP011647.1/CP011647.1; plasmid pCAV1596-2927:NZ_CP011643.1/CP011643.1; plasmid pCAV1596-41:NZ_CP011644.1/CP011644.1; plasmid pKPC_CAV1596-78:NZ_CP011645.1/CP011645.1; plasmid pKPC_CAV1596-97:NZ_CP011646.1/CP011646.1	-	5	5697	5450	6/9/15	2/21/17	Complete Genome	University of Oxford	SAMN03024583	GCA_001022235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/235/GCA_001022235.1_ASM102223v1	-	CAV1596
Klebsiella pneumoniae subsp. pneumoniae HS11286	1125630	PRJNA78789	78789	Proteobacteria	Gammaproteobacteria	5.68232	57.1373	chromosome:NC_016845.1/CP003200.1; plasmid pKPHS1:NC_016838.1/CP003223.1; plasmid pKPHS2:NC_016846.1/CP003224.1; plasmid pKPHS3:NC_016839.1/CP003225.1; plasmid pKPHS4:NC_016840.1/CP003226.1; plasmid pKPHS5:NC_016847.1/CP003227.1; plasmid pKPHS6:NC_016841.1/CP003228.1	-	7	5867	5779	12/21/11	3/22/17	Complete Genome	" Bioinformatics & Microbial Genomics, State Key Laboratory of Microbial Metabolism, Shanghai Jiaotong University"	SAMN02602959	GCA_000240185.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/185/GCA_000240185.2_ASM24018v2	22408243	HS11286
Thioclava arenosa	1795308	PRJNA401978	401978	Proteobacteria	Alphaproteobacteria	2.79363	65.3	-	NTJD01	25	2760	2678	9/25/17	9/25/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN07612832	GCA_002358085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/358/085/GCA_002358085.1_ASM235808v1	-	CAU 1312
Sphingomonas ginsenosidimutans	862134	PRJNA407470	407470	Proteobacteria	Alphaproteobacteria	3.90095	68.8	-	NWVD01	57	3731	3618	9/27/17	9/27/17	Contig	Guangdong Institute of Microbiology	SAMN07655733	GCA_002374835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/374/835/GCA_002374835.1_ASM237483v1	-	KACC 14949
Bacillales bacterium UBA3620	1950264	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.15684	26.7	-	DFLL01	47	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06456470	GCA_002375205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/205/GCA_002375205.1_ASM237520v1	28894102	-
Erythrobacteraceae bacterium UBA3609	1951757	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.72966	59.3	-	DFLW01	92	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452007	GCA_002375305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/305/GCA_002375305.1_ASM237530v1	28894102	-
Lachnospiraceae bacterium UBA3621	1952035	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.24082	45.2	-	DFLK01	10	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451728	GCA_002375385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/385/GCA_002375385.1_ASM237538v1	28894102	-
Caulobacteraceae bacterium UBA3608	1951538	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.32824	67.9	-	DFLX01	25	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452006	GCA_002375445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/445/GCA_002375445.1_ASM237544v1	28894102	-
Alphaproteobacteria bacterium UBA3612	1948389	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.11129	61.4	-	DFLT01	19	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454533	GCA_002375465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/465/GCA_002375465.1_ASM237546v1	28894102	-
Flavobacteriaceae bacterium UBA3611	1951834	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.3781	40.1	-	DFLU01	14	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454530	GCA_002375495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/495/GCA_002375495.1_ASM237549v1	28894102	-
Pseudomonadaceae bacterium UBA3606	1952778	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.61387	60.9	-	DFLZ01	65	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457092	GCA_002375545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/545/GCA_002375545.1_ASM237554v1	28894102	-
Balneolaceae bacterium UBA3597	1951502	PRJNA348753	348753	Balneolaeota	Balneolia	3.26353	37.4	-	DFMI01	28	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453349	GCA_002375645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/645/GCA_002375645.1_ASM237564v1	28894102	-
Flavobacteriaceae bacterium UBA3591	1951832	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.71306	36	-	DFMO01	15	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453355	GCA_002375695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/695/GCA_002375695.1_ASM237569v1	28894102	-
Balneolaceae bacterium UBA3590	1951501	PRJNA348753	348753	Balneolaeota	Balneolia	3.23628	37.4	-	DFMP01	20	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453354	GCA_002375725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/725/GCA_002375725.1_ASM237572v1	28894102	-
Rhizobiales bacterium UBA3584	1951220	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.94756	60.5	-	DFMV01	87	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453629	GCA_002375765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/765/GCA_002375765.1_ASM237576v1	28894102	-
Firmicutes bacterium UBA3583	1947971	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.38828	32	-	DFMW01	127	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452540	GCA_002375815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/815/GCA_002375815.1_ASM237581v1	28894102	-
Clostridiales bacterium UBA3578	1950858	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.80248	38.3	-	DFNB01	89	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455813	GCA_002375855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/855/GCA_002375855.1_ASM237585v1	28894102	-
Firmicutes bacterium UBA3576	1947970	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.99127	62.6	-	DFND01	98	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455821	GCA_002375895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/895/GCA_002375895.1_ASM237589v1	28894102	-
Firmicutes bacterium UBA3575	1947969	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.468	55.2	-	DFNE01	151	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455820	GCA_002375925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/925/GCA_002375925.1_ASM237592v1	28894102	-
Acetothermia bacterium UBA3574	1953098	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	1.57678	65.4	-	DFNF01	83	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455819	GCA_002375935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/935/GCA_002375935.1_ASM237593v1	28894102	-
Firmicutes bacterium UBA3573	1947968	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.98151	39	-	DFNG01	257	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455818	GCA_002375965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/965/GCA_002375965.1_ASM237596v1	28894102	-
Acetothermia bacterium UBA3571	1953097	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	1.84257	62.5	-	DFNI01	46	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455816	GCA_002375995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/995/GCA_002375995.1_ASM237599v1	28894102	-
Firmicutes bacterium UBA3572	1947967	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.03348	59.3	-	DFNH01	40	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455817	GCA_002375985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/985/GCA_002375985.1_ASM237598v1	28894102	-
Firmicutes bacterium UBA3570	1947966	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.16889	63	-	DFNJ01	36	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455815	GCA_002376005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/005/GCA_002376005.1_ASM237600v1	28894102	-
Firmicutes bacterium UBA3567	1947964	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.03382	39.2	-	DFNM01	268	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451006	GCA_002376045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/045/GCA_002376045.1_ASM237604v1	28894102	-
Bacillales bacterium UBA3566	1950263	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.77611	33.6	-	DFNN01	162	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451008	GCA_002376065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/065/GCA_002376065.1_ASM237606v1	28894102	-
Acetothermia bacterium UBA3564	1953095	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	1.49784	65.4	-	DFNP01	72	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450806	GCA_002376085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/085/GCA_002376085.1_ASM237608v1	28894102	-
Acetothermia bacterium UBA3565	1953096	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	1.83394	62.1	-	DFNO01	96	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451011	GCA_002376075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/075/GCA_002376075.1_ASM237607v1	28894102	-
Acetothermia bacterium UBA3563	1953094	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	1.51927	65.8	-	DFNQ01	162	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450799	GCA_002376125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/125/GCA_002376125.1_ASM237612v1	28894102	-
Flavobacteriales bacterium UBA3559	1950998	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.3108	44.9	-	DFNU01	24	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06456099	GCA_002376145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/145/GCA_002376145.1_ASM237614v1	28894102	-
Nitrospiraceae bacterium UBA3562	1952979	PRJNA348753	348753	Nitrospirae	Nitrospira	1.77318	62.9	-	DFNR01	92	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451000	GCA_002376155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/155/GCA_002376155.1_ASM237615v1	28894102	-
Firmicutes bacterium UBA3561	1947963	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.07835	63.1	-	DFNS01	153	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451002	GCA_002376165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/165/GCA_002376165.1_ASM237616v1	28894102	-
Balneolaceae bacterium UBA3598	1951503	PRJNA348753	348753	Balneolaeota	Balneolia	3.92777	40.9	-	DFMH01	33	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453356	GCA_002376285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/285/GCA_002376285.1_ASM237628v1	28894102	-
Flavobacteriaceae bacterium UBA3594	1951833	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.82811	41.4	-	DFML01	47	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453350	GCA_002376315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/315/GCA_002376315.1_ASM237631v1	28894102	-
Proteobacteria bacterium UBA3588	1948171	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	2.81019	63	-	DFMR01	202	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452535	GCA_002376325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/325/GCA_002376325.1_ASM237632v1	28894102	-
Clostridiales bacterium UBA3582	1950859	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.8436	47.8	-	DFMX01	114	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452541	GCA_002376415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/415/GCA_002376415.1_ASM237641v1	28894102	-
Nitrospiraceae bacterium UBA3568	1952980	PRJNA348753	348753	Nitrospirae	Nitrospira	1.66413	62.5	-	DFNL01	74	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450797	GCA_002376445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/445/GCA_002376445.1_ASM237644v1	28894102	-
Firmicutes bacterium UBA3569	1947965	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.97139	61.9	-	DFNK01	215	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450796	GCA_002376455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/455/GCA_002376455.1_ASM237645v1	28894102	-
Acetothermia bacterium UBA3560	1953093	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	1.87253	62.8	-	DFNT01	51	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451004	GCA_002376485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/485/GCA_002376485.1_ASM237648v1	28894102	-
Firmicutes bacterium UBA3546	1947961	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.85621	33.4	-	DFOH01	64	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451515	GCA_002376545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/545/GCA_002376545.1_ASM237654v1	28894102	-
Bacteroidales bacterium UBA3542	1950487	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.10905	41.3	-	DFOL01	46	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451061	GCA_002376565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/565/GCA_002376565.1_ASM237656v1	28894102	-
Jonesiaceae bacterium UBA3555	1951960	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.38914	54.8	-	DFNY01	242	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454604	GCA_002376595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/595/GCA_002376595.1_ASM237659v1	28894102	-
Bacteroidales bacterium UBA3543	1950488	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.85945	45	-	DFOK01	119	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451519	GCA_002376715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/715/GCA_002376715.1_ASM237671v1	28894102	-
Cloacimonetes bacterium UBA3541	1947845	PRJNA348753	348753	FCB group	Candidatus Cloacimonetes	1.85954	36	-	DFOM01	67	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451058	GCA_002376725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/725/GCA_002376725.1_ASM237672v1	28894102	-
Bacteroidales bacterium UBA3540	1950486	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.17299	46.2	-	DFON01	222	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451059	GCA_002376755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/755/GCA_002376755.1_ASM237675v1	28894102	-
Bacteroidales bacterium UBA3539	1950485	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.14182	41.3	-	DFOO01	27	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455306	GCA_002376785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/785/GCA_002376785.1_ASM237678v1	28894102	-
Bdellovibrionaceae bacterium UBA3536	1961514	PRJNA348753	348753	Proteobacteria	Oligoflexia	2.84199	44.9	-	DFOR01	86	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455297	GCA_002376795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/795/GCA_002376795.1_ASM237679v1	28894102	-
Cloacimonetes bacterium UBA3538	1947844	PRJNA348753	348753	FCB group	Candidatus Cloacimonetes	1.86278	36	-	DFOP01	21	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455305	GCA_002376825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/825/GCA_002376825.1_ASM237682v1	28894102	-
Bdellovibrionaceae bacterium UBA3535	1961513	PRJNA348753	348753	Proteobacteria	Oligoflexia	2.31172	41.8	-	DFOS01	28	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453989	GCA_002376845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/845/GCA_002376845.1_ASM237684v1	28894102	-
Opitutae bacterium UBA3534	1948719	PRJNA348753	348753	PVC group	Verrucomicrobia	1.8464	46.1	-	DFOT01	12	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455295	GCA_002376875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/875/GCA_002376875.1_ASM237687v1	28894102	-
Patescibacteria group bacterium UBA3533	1948815	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.58424	41.8	-	DFOU01	14	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454018	GCA_002376865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/865/GCA_002376865.1_ASM237686v1	28894102	-
Patescibacteria group bacterium UBA3531	1948814	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.680106	41.9	-	DFOW01	16	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455300	GCA_002376885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/885/GCA_002376885.1_ASM237688v1	28894102	-
Flavobacteriaceae bacterium UBA3537	1951831	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.81173	37.1	-	DFOQ01	127	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455298	GCA_002376925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/925/GCA_002376925.1_ASM237692v1	28894102	-
Patescibacteria group bacterium UBA3530	1948813	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.53853	44.5	-	DFOX01	17	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455299	GCA_002376945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/945/GCA_002376945.1_ASM237694v1	28894102	-
Gammaproteobacteria bacterium UBA3529	1948610	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	1.60149	44	-	DFOY01	193	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457871	GCA_002376955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/955/GCA_002376955.1_ASM237695v1	28894102	-
Gammaproteobacteria bacterium UBA3532	1948611	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.01272	46.1	-	DFOV01	454	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455301	GCA_002376965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/965/GCA_002376965.1_ASM237696v1	28894102	-
Patescibacteria group bacterium UBA3527	1948812	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.552779	42.9	-	DFPA01	62	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06456464	GCA_002377025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/025/GCA_002377025.1_ASM237702v1	28894102	-
Patescibacteria group bacterium UBA3526	1948811	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.588127	48	-	DFPB01	14	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06456465	GCA_002377045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/045/GCA_002377045.1_ASM237704v1	28894102	-
Erythrobacteraceae bacterium UBA3525	1951756	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.53166	60.6	-	DFPC01	37	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06456466	GCA_002377055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/055/GCA_002377055.1_ASM237705v1	28894102	-
Patescibacteria group bacterium UBA3524	1948810	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.598288	41.1	-	DFPD01	35	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457864	GCA_002377085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/085/GCA_002377085.1_ASM237708v1	28894102	-
Firmicutes bacterium UBA3520	1947960	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.55321	35.2	-	DFPH01	62	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457868	GCA_002377165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/165/GCA_002377165.1_ASM237716v1	28894102	-
Enterobacteriaceae bacterium UBA3518	1951682	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.01965	54.1	-	DFPJ01	106	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455534	GCA_002377185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/185/GCA_002377185.1_ASM237718v1	28894102	-
Enterobacteriaceae bacterium UBA3516	1951681	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.58037	53.6	-	DFPL01	362	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455536	GCA_002377245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/245/GCA_002377245.1_ASM237724v1	28894102	-
Comamonadaceae bacterium UBA3515	1951605	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	4.52306	64.1	-	DFPM01	278	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455539	GCA_002377265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/265/GCA_002377265.1_ASM237726v1	28894102	-
Gemmatimonadales bacterium UBA3512	1951115	PRJNA348753	348753	FCB group	Gemmatimonadetes	2.38776	53.8	-	DFPP01	223	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455540	GCA_002377325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/325/GCA_002377325.1_ASM237732v1	28894102	-
Dehalococcoidia bacterium UBA3509	1948498	PRJNA348753	348753	Terrabacteria group	Chloroflexi	1.55088	38.7	-	DFPS01	124	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450563	GCA_002377345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/345/GCA_002377345.1_ASM237734v1	28894102	-
Gemmatimonadales bacterium UBA3511	1951114	PRJNA348753	348753	FCB group	Gemmatimonadetes	2.00428	44.7	-	DFPQ01	112	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455543	GCA_002377365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/365/GCA_002377365.1_ASM237736v1	28894102	-
Myxococcales bacterium UBA3505	1961465	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	3.53376	52.7	-	DFPW01	385	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450559	GCA_002377445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/445/GCA_002377445.1_ASM237744v1	28894102	-
Alphaproteobacteria bacterium UBA3504	1948388	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.4233	45.9	-	DFPX01	256	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450560	GCA_002377485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/485/GCA_002377485.1_ASM237748v1	28894102	-
Alphaproteobacteria bacterium UBA3502	1948387	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.73398	57	-	DFPZ01	186	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450558	GCA_002377535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/535/GCA_002377535.1_ASM237753v1	28894102	-
Gemmatimonadales bacterium UBA3501	1951113	PRJNA348753	348753	FCB group	Gemmatimonadetes	2.38879	50.7	-	DFQA01	161	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450555	GCA_002377525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/525/GCA_002377525.1_ASM237752v1	28894102	-
Anaerolineales bacterium UBA3499	1950205	PRJNA348753	348753	Terrabacteria group	Chloroflexi	2.13305	40.7	-	DFQC01	63	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457119	GCA_002377585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/585/GCA_002377585.1_ASM237758v1	28894102	-
Gemmatimonadales bacterium UBA3497	1951112	PRJNA348753	348753	FCB group	Gemmatimonadetes	1.93505	45.1	-	DFQE01	45	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457115	GCA_002377615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/615/GCA_002377615.1_ASM237761v1	28894102	-
Gammaproteobacteria bacterium UBA3498	1948609	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.46744	43.5	-	DFQD01	250	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450482	GCA_002377605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/605/GCA_002377605.1_ASM237760v1	28894102	-
Nitrospinaceae bacterium UBA3496	1953053	PRJNA348753	348753	Nitrospinae/Tectomicrobia group	Nitrospinae	2.24603	34.9	-	DFQF01	100	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457116	GCA_002377645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/645/GCA_002377645.1_ASM237764v1	28894102	-
Dehalococcoidia bacterium UBA3495	1948497	PRJNA348753	348753	Terrabacteria group	Chloroflexi	1.73091	42.6	-	DFQG01	123	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457117	GCA_002377655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/655/GCA_002377655.1_ASM237765v1	28894102	-
Rhizobiaceae bacterium UBA3490	1953065	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	4.40691	61.7	-	DFQL01	116	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457114	GCA_002377765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/765/GCA_002377765.1_ASM237776v1	28894102	-
Enterococcaceae bacterium UBA3489	1951730	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.04159	40.6	-	DFQM01	27	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452298	GCA_002377775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/775/GCA_002377775.1_ASM237777v1	28894102	-
Haematobacter sp. UBA3484	1946582	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	4.2048	65.3	-	DFQR01	98	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452293	GCA_002377865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/865/GCA_002377865.1_ASM237786v1	28894102	-
Halieaceae bacterium UBA3479	1951907	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.61176	55.4	-	DFQW01	210	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453474	GCA_002377985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/985/GCA_002377985.1_ASM237798v1	28894102	-
Flavobacteriales bacterium UBA3477	1950997	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.85162	47.2	-	DFQY01	55	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453472	GCA_002378005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/005/GCA_002378005.1_ASM237800v1	28894102	-
Phycisphaerales bacterium UBA3472	1951199	PRJNA348753	348753	PVC group	Planctomycetes	2.757	57.5	-	DFRD01	285	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453469	GCA_002378075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/075/GCA_002378075.1_ASM237807v1	28894102	-
Bdellovibrionaceae bacterium UBA3471	1961512	PRJNA348753	348753	Proteobacteria	Oligoflexia	2.74977	44.9	-	DFRE01	185	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453466	GCA_002378105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/105/GCA_002378105.1_ASM237810v1	28894102	-
Rhodospirillaceae bacterium UBA3470	1952854	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.2221	56	-	DFRF01	235	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453467	GCA_002378125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/125/GCA_002378125.1_ASM237812v1	28894102	-
Rhodobiaceae bacterium UBA3468	1952823	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.18397	61.6	-	DFRH01	86	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452977	GCA_002378165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/165/GCA_002378165.1_ASM237816v1	28894102	-
Patescibacteria group bacterium UBA3466	1948809	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.902885	44.3	-	DFRJ01	4	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452979	GCA_002378195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/195/GCA_002378195.1_ASM237819v1	28894102	-
Leptospiraceae bacterium UBA3465	1952203	PRJNA348753	348753	Spirochaetes	Spirochaetia	4.60959	49.9	-	DFRK01	24	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452982	GCA_002378225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/225/GCA_002378225.1_ASM237822v1	28894102	-
Leptospiraceae bacterium UBA3464	1952202	PRJNA348753	348753	Spirochaetes	Spirochaetia	4.91793	52.9	-	DFRL01	46	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452981	GCA_002378245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/245/GCA_002378245.1_ASM237824v1	28894102	-
Comamonadaceae bacterium UBA3463	1951604	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	4.96399	63.6	-	DFRM01	170	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452984	GCA_002378265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/265/GCA_002378265.1_ASM237826v1	28894102	-
Proteobacteria bacterium UBA3457	1948170	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	1.79091	60.9	-	DFRS01	81	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453722	GCA_002378305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/305/GCA_002378305.1_ASM237830v1	28894102	-
Enterobacteriaceae bacterium UBA3456	1951680	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.73359	56.7	-	DFRT01	101	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06456476	GCA_002378325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/325/GCA_002378325.1_ASM237832v1	28894102	-
Porticoccaceae bacterium UBA3445	1952759	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.13896	49.6	-	DFSE01	120	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452667	GCA_002378505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/505/GCA_002378505.1_ASM237850v1	28894102	-
Rhodobacteraceae bacterium UBA3443	1952806	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.97732	49.9	-	DFSG01	88	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454520	GCA_002378545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/545/GCA_002378545.1_ASM237854v1	28894102	-
Flavobacteriales bacterium UBA3442	1950995	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.46808	48.5	-	DFSH01	86	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452672	GCA_002378565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/565/GCA_002378565.1_ASM237856v1	28894102	-
Flavobacteriaceae bacterium UBA3440	1951829	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.41751	42.3	-	DFSJ01	158	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452670	GCA_002378585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/585/GCA_002378585.1_ASM237858v1	28894102	-
Alphaproteobacteria bacterium UBA3439	1948385	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	1.84336	49.1	-	DFSK01	183	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454019	GCA_002378605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/605/GCA_002378605.1_ASM237860v1	28894102	-
Rhodobacteraceae bacterium UBA3438	1952805	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.06913	50.1	-	DFSL01	114	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454020	GCA_002378625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/625/GCA_002378625.1_ASM237862v1	28894102	-
Porticoccaceae bacterium UBA3436	1952758	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.0822	49.8	-	DFSN01	92	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454013	GCA_002378645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/645/GCA_002378645.1_ASM237864v1	28894102	-
Porticoccaceae bacterium UBA3433	1952757	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.28042	50.5	-	DFSQ01	51	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454016	GCA_002378685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/685/GCA_002378685.1_ASM237868v1	28894102	-
Micrococcales bacterium UBA3432	1951169	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.2114	52	-	DFSR01	55	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454017	GCA_002378705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/705/GCA_002378705.1_ASM237870v1	28894102	-
Patescibacteria group bacterium UBA3458	1948808	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.69895	46.9	-	DFRR01	17	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06456487	GCA_002378745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/745/GCA_002378745.1_ASM237874v1	28894102	-
Porticoccaceae bacterium UBA3426	1952756	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	1.67799	50.2	-	DFSX01	207	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451483	GCA_002378765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/765/GCA_002378765.1_ASM237876v1	28894102	-
Halothiobacillaceae bacterium UBA3459	1951924	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.97507	47.4	-	DFRQ01	182	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06456486	GCA_002378785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/785/GCA_002378785.1_ASM237878v1	28894102	-
Alphaproteobacteria bacterium UBA3447	1948386	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	1.93805	47	-	DFSC01	172	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452669	GCA_002378855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/855/GCA_002378855.1_ASM237885v1	28894102	-
Ruminococcaceae bacterium UBA3451	1952318	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.03469	47.3	-	DFRY01	79	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453739	GCA_002378845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/845/GCA_002378845.1_ASM237884v1	28894102	-
Flavobacteriales bacterium UBA3446	1950996	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.69563	43	-	DFSD01	201	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454515	GCA_002378885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/885/GCA_002378885.1_ASM237888v1	28894102	-
Halieaceae bacterium UBA3444	1951906	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.20427	52.1	-	DFSF01	143	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454513	GCA_002378915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/915/GCA_002378915.1_ASM237891v1	28894102	-
Alphaproteobacteria bacterium UBA3437	1948384	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.24352	47.4	-	DFSM01	54	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454012	GCA_002378945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/945/GCA_002378945.1_ASM237894v1	28894102	-
Chitinophagaceae bacterium UBA3430	1951554	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.94002	48.6	-	DFST01	182	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454015	GCA_002378975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/975/GCA_002378975.1_ASM237897v1	28894102	-
Rhodobacteraceae bacterium UBA3428	1952804	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	1.84514	58.6	-	DFSV01	147	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451487	GCA_002379005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/005/GCA_002379005.1_ASM237900v1	28894102	-
Flavobacteriales bacterium UBA3425	1950993	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.64299	53.1	-	DFSY01	69	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451486	GCA_002379025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/025/GCA_002379025.1_ASM237902v1	28894102	-
Clostridiales bacterium UBA3733	1950866	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.53761	56.2	-	DFTA01	116	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06456596	GCA_002379065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/065/GCA_002379065.1_ASM237906v1	28894102	-
Halieaceae bacterium UBA4216	1951910	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.9045	61.2	-	DFTI01	22	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450685	GCA_002379405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/405/GCA_002379405.1_ASM237940v1	28894102	-
Rhizobiales bacterium UBA4210	1951223	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	4.09558	60.2	-	DFTO01	163	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450687	GCA_002379435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/435/GCA_002379435.1_ASM237943v1	28894102	-
Lachnospiraceae bacterium UBA4222	1952074	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.08682	52.3	-	DFTC01	154	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455665	GCA_002379415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/415/GCA_002379415.1_ASM237941v1	28894102	-
Bacteriovoracaceae bacterium UBA4207	1961485	PRJNA348753	348753	Proteobacteria	Oligoflexia	3.21173	41.3	-	DFTR01	70	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455418	GCA_002379495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/495/GCA_002379495.1_ASM237949v1	28894102	-
Bacteroidales bacterium UBA4190	1950550	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.66492	52.3	-	DFUI01	157	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455649	GCA_002379665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/665/GCA_002379665.1_ASM237966v1	28894102	-
Bacteroidales bacterium UBA4188	1950549	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.24061	46.2	-	DFUK01	189	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450896	GCA_002379675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/675/GCA_002379675.1_ASM237967v1	28894102	-
Cloacimonetes bacterium UBA4186	1947850	PRJNA348753	348753	FCB group	Candidatus Cloacimonetes	1.84534	36	-	DFUM01	24	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450890	GCA_002379705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/705/GCA_002379705.1_ASM237970v1	28894102	-
Bacteroidales bacterium UBA4182	1950546	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.83216	40.8	-	DFUQ01	176	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450894	GCA_002379745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/745/GCA_002379745.1_ASM237974v1	28894102	-
Bacteroidales bacterium UBA4183	1950547	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.37327	46.1	-	DFUP01	124	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450895	GCA_002379755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/755/GCA_002379755.1_ASM237975v1	28894102	-
Cloacimonetes bacterium UBA4177	1947849	PRJNA348753	348753	FCB group	Candidatus Cloacimonetes	1.85752	36	-	DFUV01	19	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454258	GCA_002379815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/815/GCA_002379815.1_ASM237981v1	28894102	-
Bacteroidales bacterium UBA4178	1950543	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.08757	45.9	-	DFUU01	192	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454255	GCA_002379805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/805/GCA_002379805.1_ASM237980v1	28894102	-
Bacteroidales bacterium UBA4176	1950542	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.67993	45.7	-	DFUW01	197	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454259	GCA_002379845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/845/GCA_002379845.1_ASM237984v1	28894102	-
Cloacimonetes bacterium UBA4175	1947848	PRJNA348753	348753	FCB group	Candidatus Cloacimonetes	1.73168	53.7	-	DFUX01	97	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454256	GCA_002379855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/855/GCA_002379855.1_ASM237985v1	28894102	-
Bacteroidales bacterium UBA4174	1950541	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.0169	46.2	-	DFUY01	173	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454257	GCA_002379885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/885/GCA_002379885.1_ASM237988v1	28894102	-
Bacteroidales bacterium UBA4173	1950540	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.66634	41.3	-	DFUZ01	170	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454262	GCA_002379905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/905/GCA_002379905.1_ASM237990v1	28894102	-
Flavobacteriaceae bacterium UBA4167	1951842	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.40831	40	-	DFVF01	113	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451758	GCA_002379965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/965/GCA_002379965.1_ASM237996v1	28894102	-
Flavobacteriaceae bacterium UBA4166	1951841	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.87792	42.2	-	DFVG01	58	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451757	GCA_002379985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/985/GCA_002379985.1_ASM237998v1	28894102	-
Kordiimonadaceae bacterium UBA4149	1951964	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.92725	54.5	-	DFVX01	62	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451478	GCA_002380195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/195/GCA_002380195.1_ASM238019v1	28894102	-
Rhodobiaceae bacterium UBA4205	1952825	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.25679	54.5	-	DFTT01	85	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455420	GCA_002380265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/265/GCA_002380265.1_ASM238026v1	28894102	-
Burkholderiales bacterium UBA4200	1950777	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	3.71013	65.7	-	DFTY01	182	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455425	GCA_002380275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/275/GCA_002380275.1_ASM238027v1	28894102	-
Comamonadaceae bacterium UBA4184	1951606	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	4.48895	62	-	DFUO01	56	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450888	GCA_002380365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/365/GCA_002380365.1_ASM238036v1	28894102	-
Bacteroidales bacterium UBA4187	1950548	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.0435	41.5	-	DFUL01	67	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450891	GCA_002380375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/375/GCA_002380375.1_ASM238037v1	28894102	-
Bacteroidales bacterium UBA4181	1950545	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.66105	52.4	-	DFUR01	107	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450893	GCA_002380425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/425/GCA_002380425.1_ASM238042v1	28894102	-
Cloacimonetes bacterium UBA4172	1947847	PRJNA348753	348753	FCB group	Candidatus Cloacimonetes	1.74651	36.2	-	DFVA01	72	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454263	GCA_002380465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/465/GCA_002380465.1_ASM238046v1	28894102	-
Flavobacteriales bacterium UBA4159	1951003	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.00699	37	-	DFVN01	101	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454007	GCA_002380545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/545/GCA_002380545.1_ASM238054v1	28894102	-
Flavobacteriales bacterium UBA4162	1951004	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.2065	44.7	-	DFVK01	126	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451753	GCA_002380565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/565/GCA_002380565.1_ASM238056v1	28894102	-
Leptospiraceae bacterium UBA4148	1952204	PRJNA348753	348753	Spirochaetes	Spirochaetia	4.60732	49.8	-	DFVY01	24	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451477	GCA_002380645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/645/GCA_002380645.1_ASM238064v1	28894102	-
Myxococcales bacterium UBA4151	1961466	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	3.36757	55.2	-	DFVV01	375	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454000	GCA_002380655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/655/GCA_002380655.1_ASM238065v1	28894102	-
Akkermansiaceae bacterium UBA4145	1951361	PRJNA348753	348753	PVC group	Verrucomicrobia	3.47953	53.9	-	DFWB01	376	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451474	GCA_002380675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/675/GCA_002380675.1_ASM238067v1	28894102	-
Enterococcaceae bacterium UBA4140	1951733	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.37439	42.5	-	DFWG01	18	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451469	GCA_002380745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/745/GCA_002380745.1_ASM238074v1	28894102	-
Anaerolineales bacterium UBA4142	1950208	PRJNA348753	348753	Terrabacteria group	Chloroflexi	3.84056	60	-	DFWE01	394	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451471	GCA_002380735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/735/GCA_002380735.1_ASM238073v1	28894102	-
Clostridiales bacterium UBA4139	1950875	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.08742	39.3	-	DFWH01	20	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453737	GCA_002380805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/805/GCA_002380805.1_ASM238080v1	28894102	-
Enterobacteriaceae bacterium UBA4135	1951685	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.28941	55.9	-	DFWL01	29	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453744	GCA_002380895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/895/GCA_002380895.1_ASM238089v1	28894102	-
Bacteroidales bacterium UBA4133	1950539	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.84302	45.7	-	DFWN01	210	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453742	GCA_002380925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/925/GCA_002380925.1_ASM238092v1	28894102	-
Methylococcaceae bacterium UBA4132	1952223	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.09072	41.9	-	DFWO01	201	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452547	GCA_002380945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/945/GCA_002380945.1_ASM238094v1	28894102	-
Chitinophagaceae bacterium UBA4128	1951556	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.82856	38.2	-	DFWS01	65	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453220	GCA_002381005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/005/GCA_002381005.1_ASM238100v1	28894102	-
Candidatus Nomurabacteria bacterium UBA4124	1953302	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.5926	42	-	DFWW01	41	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453214	GCA_002381075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/075/GCA_002381075.1_ASM238107v1	28894102	-
Bacteroidales bacterium UBA4179	1950544	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.15888	41.4	-	DFUT01	46	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454254	GCA_002381125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/125/GCA_002381125.1_ASM238112v1	28894102	-
Flavobacteriaceae bacterium UBA3478	1951830	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.61763	39.8	-	DFQX01	108	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453475	GCA_002381155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/155/GCA_002381155.1_ASM238115v1	28894102	-
Firmicutes bacterium UBA3553	1947962	PRJNA348753	348753	Terrabacteria group	Firmicutes	4.31986	35.4	-	DFOA01	70	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452311	GCA_002381185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/185/GCA_002381185.1_ASM238118v1	28894102	-
Flavobacteriales bacterium UBA3431	1950994	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.6746	53.3	-	DFSS01	62	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454014	GCA_002381225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/225/GCA_002381225.1_ASM238122v1	28894102	-
bacterium symbiont of Cryptopsaras couesii	1927128	PRJNA356863	356863	unclassified Bacteria	unclassified Bacteria (miscellaneous)	2.14356	37.6564	chromosome 1:CP020660.1; chromosome 2:CP020663.1; plasmid pCC1:CP020661.1; plasmid pCC2:CP020662.1	-	4	2121	1986	9/27/17	9/27/17	Chromosome	DEEPEND Consortium	SAMN06128235	GCA_002381345.1	-	-	-	-
Balneolaceae bacterium UBA4214	1951506	PRJNA348753	348753	Balneolaeota	Balneolia	3.07493	36.4	-	DFTK01	190	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450683	GCA_002381405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/405/GCA_002381405.1_ASM238140v1	28894102	-
Bacteroidales bacterium UBA4220	1950551	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.92619	50.1	-	DFTE01	25	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455663	GCA_002381415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/415/GCA_002381415.1_ASM238141v1	28894102	-
Candidatus Saccharibacteria bacterium UBA4215	1953341	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.664051	48.2	-	DFTJ01	31	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450684	GCA_002381485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/485/GCA_002381485.1_ASM238148v1	28894102	-
Candidatus Saccharibacteria bacterium UBA4123	1953340	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.726308	46.8	-	DFWX01	40	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453217	GCA_002381545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/545/GCA_002381545.1_ASM238154v1	28894102	-
Bacteroidales bacterium UBA4116	1950538	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.97454	39.9	-	DFXE01	25	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453438	GCA_002381645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/645/GCA_002381645.1_ASM238164v1	28894102	-
Bacillaceae bacterium UBA4111	1951478	PRJNA348753	348753	Terrabacteria group	Firmicutes	4.04962	37.8	-	DFXJ01	403	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453443	GCA_002381665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/665/GCA_002381665.1_ASM238166v1	28894102	-
Bacteriovoracaceae bacterium UBA4097	1961484	PRJNA348753	348753	Proteobacteria	Oligoflexia	3.54515	41.7	-	DFXX01	122	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06456329	GCA_002381765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/765/GCA_002381765.1_ASM238176v1	28894102	-
Peptococcaceae bacterium UBA4083	1952709	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.46281	42.3	-	DFYL01	18	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451307	GCA_002381825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/825/GCA_002381825.1_ASM238182v1	28894102	-
Clostridiales bacterium UBA4080	1950874	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.23907	34.2	-	DFYO01	76	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451306	GCA_002381865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/865/GCA_002381865.1_ASM238186v1	28894102	-
Candidatus Dojkabacteria bacterium UBA4069	1953398	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.615197	33.3	-	DFYZ01	5	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457106	GCA_002381925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/925/GCA_002381925.1_ASM238192v1	28894102	-
Bacteriovoracaceae bacterium UBA4096	1961483	PRJNA348753	348753	Proteobacteria	Oligoflexia	3.69036	40.7	-	DFXY01	67	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06456328	GCA_002381945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/945/GCA_002381945.1_ASM238194v1	28894102	-
Syntrophaceae bacterium UBA4065	1961431	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.72391	62.8	-	DFZD01	117	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457098	GCA_002381965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/965/GCA_002381965.1_ASM238196v1	28894102	-
Anaerolineaceae bacterium UBA4063	1951409	PRJNA348753	348753	Terrabacteria group	Chloroflexi	2.27417	40.4	-	DFZF01	206	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457100	GCA_002381985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/985/GCA_002381985.1_ASM238198v1	28894102	-
Desulfobacteraceae bacterium UBA4072	1961535	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.78082	53.9	-	DFYW01	254	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452285	GCA_002382005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/005/GCA_002382005.1_ASM238200v1	28894102	-
Patescibacteria group bacterium UBA4067	1948816	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.592661	29	-	DFZB01	73	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457096	GCA_002382025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/025/GCA_002382025.1_ASM238202v1	28894102	-
Syntrophaceae bacterium UBA4059	1961430	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.95292	49.1	-	DFZJ01	229	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454798	GCA_002382045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/045/GCA_002382045.1_ASM238204v1	28894102	-
Candidatus Shapirobacteria bacterium UBA4062	1953384	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.59827	38	-	DFZG01	69	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457101	GCA_002382075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/075/GCA_002382075.1_ASM238207v1	28894102	-
Desulfobacteraceae bacterium UBA4064	1961534	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	4.77199	50.1	-	DFZE01	300	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457099	GCA_002382065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/065/GCA_002382065.1_ASM238206v1	28894102	-
Firmicutes bacterium UBA4053	1948000	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.23128	47	-	DFZP01	106	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454804	GCA_002382125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/125/GCA_002382125.1_ASM238212v1	28894102	-
Rhodocyclaceae bacterium UBA4043	1952842	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	2.8851	67.8	-	DFZZ01	218	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457338	GCA_002382165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/165/GCA_002382165.1_ASM238216v1	28894102	-
Clostridiaceae bacterium UBA4052	1951572	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.31345	47.3	-	DFZQ01	110	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454803	GCA_002382205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/205/GCA_002382205.1_ASM238220v1	28894102	-
Epsilonproteobacteria bacterium UBA4036	1948572	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.65057	33.2	-	DGAG01	18	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455026	GCA_002382325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/325/GCA_002382325.1_ASM238232v1	28894102	-
Enterococcaceae bacterium UBA4035	1951732	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.20806	42.8	-	DGAH01	48	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455025	GCA_002382365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/365/GCA_002382365.1_ASM238236v1	28894102	-
Gammaproteobacteria bacterium UBA4030	1948615	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.30123	51.6	-	DGAM01	216	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455020	GCA_002382385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/385/GCA_002382385.1_ASM238238v1	28894102	-
Flavobacteriaceae bacterium UBA4033	1951840	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.41855	30.6	-	DGAJ01	153	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455023	GCA_002382405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/405/GCA_002382405.1_ASM238240v1	28894102	-
Porticoccaceae bacterium UBA4026	1952761	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.59869	45.6	-	DGAQ01	78	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457602	GCA_002382445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/445/GCA_002382445.1_ASM238244v1	28894102	-
Rhodobacteraceae bacterium UBA4024	1952808	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	1.85078	49.4	-	DGAS01	193	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457604	GCA_002382485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/485/GCA_002382485.1_ASM238248v1	28894102	-
Cyanobacteria bacterium UBA4093	1947885	PRJNA348753	348753	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.82456	63.9	-	DFYB01	63	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06456325	GCA_002382535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/535/GCA_002382535.1_ASM238253v1	28894102	-
Opitutaceae bacterium UBA4094	1952999	PRJNA348753	348753	PVC group	Verrucomicrobia	3.94708	63.1	-	DFYA01	346	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06456330	GCA_002382525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/525/GCA_002382525.1_ASM238252v1	28894102	-
Syntrophaceae bacterium UBA4090	1961432	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	1.86871	56	-	DFYE01	150	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06456326	GCA_002382565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/565/GCA_002382565.1_ASM238256v1	28894102	-
bacterium UBP4_UBA4092	1953432	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	3.36264	43.5	-	DFYC01	308	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06456324	GCA_002382585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/585/GCA_002382585.1_ASM238258v1	28894102	-
Dehalococcoidia bacterium UBA4087	1948501	PRJNA348753	348753	Terrabacteria group	Chloroflexi	0.962248	48.2	-	DFYH01	29	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451303	GCA_002382615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/615/GCA_002382615.1_ASM238261v1	28894102	-
Synergistaceae bacterium UBA4088	1952908	PRJNA348753	348753	Synergistetes	Synergistia	1.84638	53.9	-	DFYG01	185	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451300	GCA_002382605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/605/GCA_002382605.1_ASM238260v1	28894102	-
Peptococcaceae bacterium UBA4068	1952708	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.04384	43.2	-	DFZA01	19	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457107	GCA_002382665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/665/GCA_002382665.1_ASM238266v1	28894102	-
Firmicutes bacterium UBA4061	1948001	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.79899	42.3	-	DFZH01	205	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457102	GCA_002382685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/685/GCA_002382685.1_ASM238268v1	28894102	-
Desulfobulbaceae bacterium UBA4056	1961550	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	3.28319	60	-	DFZM01	91	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454799	GCA_002382725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/725/GCA_002382725.1_ASM238272v1	28894102	-
bacterium UBP11_UBA4055	1953414	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	2.50755	41.8	-	DFZN01	73	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454802	GCA_002382735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/735/GCA_002382735.1_ASM238273v1	28894102	-
Firmicutes bacterium UBA4049	1947999	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.81506	46.3	-	DFZT01	101	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457344	GCA_002382755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/755/GCA_002382755.1_ASM238275v1	28894102	-
Clostridiales bacterium UBA4039	1950873	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.49906	37.1	-	DGAD01	56	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455019	GCA_002382805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/805/GCA_002382805.1_ASM238280v1	28894102	-
Flavobacteriaceae bacterium UBA4029	1951839	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.62432	38.1	-	DGAN01	105	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457595	GCA_002382825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/825/GCA_002382825.1_ASM238282v1	28894102	-
Hyphomicrobiaceae bacterium UBA4118	1951936	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.2522	62.7	-	DFXC01	203	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453436	GCA_002383105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/105/GCA_002383105.1_ASM238310v1	28894102	-
Flavobacteriales bacterium UBA4110	1951002	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.85419	35.5	-	DFXK01	18	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453444	GCA_002383165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/165/GCA_002383165.1_ASM238316v1	28894102	-
Actinomycetaceae bacterium UBA4104	1951346	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.53667	69.9	-	DFXQ01	291	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452938	GCA_002383225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/225/GCA_002383225.1_ASM238322v1	28894102	-
Bacillales bacterium UBA4100	1950276	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.24313	43.1	-	DFXU01	115	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452942	GCA_002383285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/285/GCA_002383285.1_ASM238328v1	28894102	-
Bacillales bacterium UBA4089	1950275	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.21018	42.1	-	DFYF01	59	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451299	GCA_002383305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/305/GCA_002383305.1_ASM238330v1	28894102	-
Candidatus Aminicenantes bacterium UBA4085	1953194	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	3.49142	65.3	-	DFYJ01	155	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451301	GCA_002383325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/325/GCA_002383325.1_ASM238332v1	28894102	-
Dehalococcoidia bacterium UBA4086	1948500	PRJNA348753	348753	Terrabacteria group	Chloroflexi	1.32327	42.3	-	DFYI01	157	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451304	GCA_002383345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/345/GCA_002383345.1_ASM238334v1	28894102	-
Candidatus Atribacteria bacterium UBA4082	1953204	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	1.68214	37.4	-	DFYM01	78	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451308	GCA_002383355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/355/GCA_002383355.1_ASM238335v1	28894102	-
Spirochaetaceae bacterium UBA4077	1952887	PRJNA348753	348753	Spirochaetes	Spirochaetia	2.24774	55.6	-	DFYR01	84	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452282	GCA_002383375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/375/GCA_002383375.1_ASM238337v1	28894102	-
Bacteroidales bacterium UBA4073	1950537	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.6423	40.5	-	DFYV01	195	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452286	GCA_002383425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/425/GCA_002383425.1_ASM238342v1	28894102	-
Bacteroidales bacterium UBA4070	1950536	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.43057	49.8	-	DFYY01	56	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452283	GCA_002383485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/485/GCA_002383485.1_ASM238348v1	28894102	-
Syntrophaceae bacterium UBA4054	1961429	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.65623	53.2	-	DFZO01	67	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454801	GCA_002383495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/495/GCA_002383495.1_ASM238349v1	28894102	-
Verrucomicrobia subdivision 6 bacterium UBA4027	1952937	PRJNA348753	348753	PVC group	Verrucomicrobia	1.38918	54.1	-	DGAP01	160	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457601	GCA_002383555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/555/GCA_002383555.1_ASM238355v1	28894102	-
Flavobacteriales bacterium UBA4023	1951001	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.73043	48.8	-	DGAT01	20	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457597	GCA_002383545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/545/GCA_002383545.1_ASM238354v1	28894102	-
Firmicutes bacterium UBA4091	1948002	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.77561	42.4	-	DFYD01	201	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06456327	GCA_002383565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/565/GCA_002383565.1_ASM238356v1	28894102	-
Anaerolineaceae bacterium UBA4081	1951410	PRJNA348753	348753	Terrabacteria group	Chloroflexi	1.67838	50.5	-	DFYN01	183	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451305	GCA_002383615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/615/GCA_002383615.1_ASM238361v1	28894102	-
Deltaproteobacteria bacterium UBA4075	1948546	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.34448	53.4	-	DFYT01	165	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452280	GCA_002383625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/625/GCA_002383625.1_ASM238362v1	28894102	-
Dehalococcoidia bacterium UBA4060	1948499	PRJNA348753	348753	Terrabacteria group	Chloroflexi	1.45231	49.8	-	DFZI01	110	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450449	GCA_002383665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/665/GCA_002383665.1_ASM238366v1	28894102	-
Synergistaceae bacterium UBA4066	1952907	PRJNA348753	348753	Synergistetes	Synergistia	1.97796	54	-	DFZC01	63	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450440	GCA_002383685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/685/GCA_002383685.1_ASM238368v1	28894102	-
Bacillales bacterium UBA4045	1950274	PRJNA348753	348753	Terrabacteria group	Firmicutes	5.25228	42.8	-	DFZX01	114	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457340	GCA_002383695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/695/GCA_002383695.1_ASM238369v1	28894102	-
Betaproteobacteria bacterium UBA4031	1948458	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	1.5357	44.7	-	DGAL01	95	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455021	GCA_002383745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/745/GCA_002383745.1_ASM238374v1	28894102	-
Bacteroidetes bacterium UBA4032	1953157	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.94022	36.8	-	DGAK01	220	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455022	GCA_002383785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/785/GCA_002383785.1_ASM238378v1	28894102	-
Opitutaceae bacterium UBA4046	1952998	PRJNA348753	348753	PVC group	Verrucomicrobia	3.95418	63.4	-	DFZW01	381	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457343	GCA_002383805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/805/GCA_002383805.1_ASM238380v1	28894102	-
Methanohalophilus euhalobius	51203	PRJEB22410	401597	Euryarchaeota	Methanomicrobia	1.9403	42.1	-	OBDR01	27	2089	2040	9/7/17	9/7/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06295989	GCA_900215215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/215/215/GCA_900215215.1_IMG-taxon_2703719067_annotated_assembly	-	WG-1MB
Hydrogenobacter hydrogenophilus	35835	PRJEB22471	401599	Aquificae	Aquificae	1.60149	41.5	-	OBEN01	20	1762	1693	9/6/17	9/6/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06265353	GCA_900215655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/215/655/GCA_900215655.1_IMG-taxon_2728369262_annotated_assembly	-	DSM 2913
bacterium JGI 053	1855372	PRJEB22421	401586	unclassified Bacteria	unclassified Bacteria (miscellaneous)	1.3757	71	-	OCMP01	40	1233	1208	9/19/17	9/19/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216486	GCA_900230155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/230/155/GCA_900230155.1_IMG-taxon_2651869887_annotated_assembly	-	JGI 053
Flavobacteriaceae bacterium UBA4022	1951838	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.84326	44	-	DGAU01	30	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457598	GCA_002384055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/055/GCA_002384055.1_ASM238405v1	28894102	-
Halieaceae bacterium UBA4019	1951909	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.2599	50.4	-	DGAX01	182	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455278	GCA_002384045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/045/GCA_002384045.1_ASM238404v1	28894102	-
Methylophilales bacterium UBA4021	1951162	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	1.09008	36.7	-	DGAV01	63	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457599	GCA_002384095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/095/GCA_002384095.1_ASM238409v1	28894102	-
Actinobacteria bacterium UBA4016	1948338	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.17036	45.3	-	DGBA01	109	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455273	GCA_002384085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/085/GCA_002384085.1_ASM238408v1	28894102	-
Proteobacteria bacterium UBA4015	1948172	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	1.2812	38.8	-	DGBB01	61	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453831	GCA_002384135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/135/GCA_002384135.1_ASM238413v1	28894102	-
Flavobacteriaceae bacterium UBA4012	1951836	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.80556	43.1	-	DGBE01	217	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455269	GCA_002384125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/125/GCA_002384125.1_ASM238412v1	28894102	-
Rhodobacteraceae bacterium UBA4014	1952807	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	1.89459	49.6	-	DGBC01	210	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453830	GCA_002384165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/165/GCA_002384165.1_ASM238416v1	28894102	-
Porticoccaceae bacterium UBA4010	1952760	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.05355	50.4	-	DGBG01	159	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455271	GCA_002384215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/215/GCA_002384215.1_ASM238421v1	28894102	-
Bacteroidetes bacterium UBA4009	1953156	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.1754	36.7	-	DGBH01	196	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457834	GCA_002384205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/205/GCA_002384205.1_ASM238420v1	28894102	-
Flavobacteriaceae bacterium UBA4008	1951835	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.85328	38.1	-	DGBI01	75	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457835	GCA_002384245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/245/GCA_002384245.1_ASM238424v1	28894102	-
Balneolaceae bacterium UBA3998	1951505	PRJNA348753	348753	Balneolaeota	Balneolia	3.73167	41.3	-	DGBS01	14	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451737	GCA_002384305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/305/GCA_002384305.1_ASM238430v1	28894102	-
Micrococcaceae bacterium UBA4005	1952257	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.92202	63.6	-	DGBL01	241	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457825	GCA_002384315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/315/GCA_002384315.1_ASM238431v1	28894102	-
Alphaproteobacteria bacterium UBA3994	1948397	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.47454	55.8	-	DGBW01	57	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451733	GCA_002384365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/365/GCA_002384365.1_ASM238436v1	28894102	-
Rhizobiales bacterium UBA3990	1951222	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.23964	60.4	-	DGCA01	150	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456474	GCA_002384425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/425/GCA_002384425.1_ASM238442v1	28894102	-
Gammaproteobacteria bacterium UBA3978	1948613	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.26134	54.2	-	DGCM01	141	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452008	GCA_002384615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/615/GCA_002384615.1_ASM238461v1	28894102	-
Gammaproteobacteria bacterium UBA3977	1948612	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.32559	57.8	-	DGCN01	54	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452013	GCA_002384625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/625/GCA_002384625.1_ASM238462v1	28894102	-
Rhodobiaceae bacterium UBA3976	1952824	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.37659	61.2	-	DGCO01	14	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457082	GCA_002384665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/665/GCA_002384665.1_ASM238466v1	28894102	-
Methylophilales bacterium UBA4017	1951161	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	1.16284	37.5	-	DGAZ01	55	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455274	GCA_002384685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/685/GCA_002384685.1_ASM238468v1	28894102	-
Flavobacteriaceae bacterium UBA4020	1951837	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.50771	37.3	-	DGAW01	151	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457600	GCA_002384715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/715/GCA_002384715.1_ASM238471v1	28894102	-
Gammaproteobacteria bacterium UBA4018	1948614	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.26328	51.3	-	DGAY01	216	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455277	GCA_002384705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/705/GCA_002384705.1_ASM238470v1	28894102	-
Flavobacteriales bacterium UBA4011	1951000	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.24527	37.3	-	DGBF01	211	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455272	GCA_002384725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/725/GCA_002384725.1_ASM238472v1	28894102	-
Demequinaceae bacterium UBA4004	1951643	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.87469	66.6	-	DGBM01	333	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457826	GCA_002384765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/765/GCA_002384765.1_ASM238476v1	28894102	-
Rhodocyclaceae bacterium UBA4002	1952841	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	2.16432	56.2	-	DGBO01	129	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456281	GCA_002384775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/775/GCA_002384775.1_ASM238477v1	28894102	-
Oxalobacteraceae bacterium UBA4003	1953002	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	2.76617	53.5	-	DGBN01	77	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454299	GCA_002384815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/815/GCA_002384815.1_ASM238481v1	28894102	-
Nocardioidaceae bacterium UBA4001	1953055	PRJNA348753	348753	Terrabacteria group	Actinobacteria	3.74395	71.1	-	DGBP01	87	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457829	GCA_002384855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/855/GCA_002384855.1_ASM238485v1	28894102	-
Halieaceae bacterium UBA3993	1951908	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.75701	61	-	DGBX01	64	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456472	GCA_002384925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/925/GCA_002384925.1_ASM238492v1	28894102	-
Rhizobiales bacterium UBA3986	1951221	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.72778	61.1	-	DGCE01	39	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455675	GCA_002384965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/965/GCA_002384965.1_ASM238496v1	28894102	-
Balneolaceae bacterium UBA3974	1951504	PRJNA348753	348753	Balneolaeota	Balneolia	3.24832	37.4	-	DGCQ01	18	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452010	GCA_002385005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/005/GCA_002385005.1_ASM238500v1	28894102	-
Micrococcales bacterium UBA3972	1951171	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.09594	51.2	-	DGCS01	115	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455255	GCA_002385055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/055/GCA_002385055.1_ASM238505v1	28894102	-
Chitinophagaceae bacterium UBA3961	1951555	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.12402	40.5	-	DGDD01	304	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454029	GCA_002385265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/265/GCA_002385265.1_ASM238526v1	28894102	-
Firmicutes bacterium UBA3956	1947998	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.15845	63	-	DGDI01	82	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452259	GCA_002385365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/365/GCA_002385365.1_ASM238536v1	28894102	-
Clostridiales bacterium UBA3953	1950872	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.00921	52.3	-	DGDL01	103	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452264	GCA_002385415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/415/GCA_002385415.1_ASM238541v1	28894102	-
Firmicutes bacterium UBA3951	1947997	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.13374	56.7	-	DGDN01	123	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452266	GCA_002385465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/465/GCA_002385465.1_ASM238546v1	28894102	-
Anaerobaculum sp. UBA3949	1946038	PRJNA348753	348753	Synergistetes	Synergistia	1.67964	46.2	-	DGDP01	148	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457043	GCA_002385485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/485/GCA_002385485.1_ASM238548v1	28894102	-
Candidatus Atribacteria bacterium UBA3950	1953203	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	2.08812	41.3	-	DGDO01	147	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452265	GCA_002385475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/475/GCA_002385475.1_ASM238547v1	28894102	-
Clostridiales bacterium UBA3948	1950871	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.07823	46.6	-	DGDQ01	165	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457044	GCA_002385505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/505/GCA_002385505.1_ASM238550v1	28894102	-
Bacillales bacterium UBA3945	1950272	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.18336	45.9	-	DGDT01	71	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457050	GCA_002385565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/565/GCA_002385565.1_ASM238556v1	28894102	-
Bacillales bacterium UBA3946	1950273	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.36848	52	-	DGDS01	44	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457053	GCA_002385575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/575/GCA_002385575.1_ASM238557v1	28894102	-
Firmicutes bacterium UBA3943	1947996	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.17611	52.2	-	DGDV01	59	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457048	GCA_002385625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/625/GCA_002385625.1_ASM238562v1	28894102	-
Firmicutes bacterium UBA3942	1947995	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.69141	40.6	-	DGDW01	112	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457049	GCA_002385635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/635/GCA_002385635.1_ASM238563v1	28894102	-
Firmicutes bacterium UBA3941	1947994	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.05846	41.8	-	DGDX01	126	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457046	GCA_002385665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/665/GCA_002385665.1_ASM238566v1	28894102	-
Anaerolineales bacterium UBA3940	1950207	PRJNA348753	348753	Terrabacteria group	Chloroflexi	3.6563	64.1	-	DGDY01	330	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457047	GCA_002385675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/675/GCA_002385675.1_ASM238567v1	28894102	-
Verrucomicrobia subdivision 3 bacterium UBA3939	1952930	PRJNA348753	348753	PVC group	Verrucomicrobia	3.59253	62.5	-	DGDZ01	99	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451720	GCA_002385705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/705/GCA_002385705.1_ASM238570v1	28894102	-
Ruminococcaceae bacterium UBA3938	1952327	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.80499	47.1	-	DGEA01	39	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454784	GCA_002385725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/725/GCA_002385725.1_ASM238572v1	28894102	-
Peptococcaceae bacterium UBA3937	1952707	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.65838	48.3	-	DGEB01	68	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454783	GCA_002385735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/735/GCA_002385735.1_ASM238573v1	28894102	-
Firmicutes bacterium UBA3936	1947993	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.9649	49.2	-	DGEC01	126	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454782	GCA_002385745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/745/GCA_002385745.1_ASM238574v1	28894102	-
Bacillales bacterium UBA3935	1950271	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.45078	46.6	-	DGED01	84	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454781	GCA_002385755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/755/GCA_002385755.1_ASM238575v1	28894102	-
Peptococcaceae bacterium UBA3933	1952706	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.85348	37	-	DGEF01	125	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454779	GCA_002385805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/805/GCA_002385805.1_ASM238580v1	28894102	-
Firmicutes bacterium UBA3931	1947991	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.76045	33.8	-	DGEH01	216	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454777	GCA_002385835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/835/GCA_002385835.1_ASM238583v1	28894102	-
Firmicutes bacterium UBA3932	1947992	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.79577	46	-	DGEG01	172	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454778	GCA_002385825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/825/GCA_002385825.1_ASM238582v1	28894102	-
Firmicutes bacterium UBA3930	1947990	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.91364	42.5	-	DGEI01	47	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451125	GCA_002385885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/885/GCA_002385885.1_ASM238588v1	28894102	-
Firmicutes bacterium UBA3928	1947989	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.14838	48.4	-	DGEK01	82	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457323	GCA_002385915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/915/GCA_002385915.1_ASM238591v1	28894102	-
Firmicutes bacterium UBA3926	1947988	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.30919	44.4	-	DGEM01	58	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457318	GCA_002385965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/965/GCA_002385965.1_ASM238596v1	28894102	-
Anaerolineaceae bacterium UBA3924	1951408	PRJNA348753	348753	Terrabacteria group	Chloroflexi	2.70065	63.3	-	DGEO01	49	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457320	GCA_002385985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/985/GCA_002385985.1_ASM238598v1	28894102	-
Firmicutes bacterium UBA3923	1947986	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.87782	55.2	-	DGEP01	112	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457313	GCA_002386005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/005/GCA_002386005.1_ASM238600v1	28894102	-
Firmicutes bacterium UBA3925	1947987	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.6711	52.8	-	DGEN01	36	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457319	GCA_002385995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/995/GCA_002385995.1_ASM238599v1	28894102	-
Firmicutes bacterium UBA3920	1947985	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.82523	33.2	-	DGES01	134	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450650	GCA_002386065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/065/GCA_002386065.1_ASM238606v1	28894102	-
Firmicutes bacterium UBA3919	1947984	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.43188	52.6	-	DGET01	72	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455009	GCA_002386085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/085/GCA_002386085.1_ASM238608v1	28894102	-
Firmicutes bacterium UBA3918	1947983	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.22587	53	-	DGEU01	61	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455008	GCA_002386125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/125/GCA_002386125.1_ASM238612v1	28894102	-
Bacillales bacterium UBA4622	1950281	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.05547	27.7	-	DGIM01	53	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455125	GCA_002386415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/415/GCA_002386415.1_ASM238641v1	28894102	-
Burkholderiales bacterium UBA4615	1950778	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	3.90484	63.3	-	DGIT01	152	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457688	GCA_002386465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/465/GCA_002386465.1_ASM238646v1	28894102	-
Alphaproteobacteria bacterium UBA4623	1948400	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	0.930571	47.3	-	DGIL01	10	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455124	GCA_002386485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/485/GCA_002386485.1_ASM238648v1	28894102	-
Firmicutes bacterium UBA4599	1948004	PRJNA348753	348753	Terrabacteria group	Firmicutes	4.16818	35.5	-	DGJJ01	46	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452779	GCA_002386685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/685/GCA_002386685.1_ASM238668v1	28894102	-
Flavobacteriales bacterium UBA4594	1951024	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.6654	44.5	-	DGJO01	195	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452778	GCA_002386755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/755/GCA_002386755.1_ASM238675v1	28894102	-
Enterobacteriaceae bacterium UBA4596	1951688	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.74725	56.4	-	DGJM01	206	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452776	GCA_002386745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/745/GCA_002386745.1_ASM238674v1	28894102	-
Actinobacteria bacterium UBA4592	1948341	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.04807	53.2	-	DGJQ01	172	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452772	GCA_002386785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/785/GCA_002386785.1_ASM238678v1	28894102	-
Opitutae bacterium UBA4586	1948726	PRJNA348753	348753	PVC group	Verrucomicrobia	1.95042	55.1	-	DGJW01	156	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453611	GCA_002386805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/805/GCA_002386805.1_ASM238680v1	28894102	-
Rhodospirillaceae bacterium UBA4587	1952859	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.89105	49.3	-	DGJV01	97	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453612	GCA_002386815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/815/GCA_002386815.1_ASM238681v1	28894102	-
Flammeovirgaceae bacterium UBA4584	1951783	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.60961	38.5	-	DGJY01	248	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453609	GCA_002386845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/845/GCA_002386845.1_ASM238684v1	28894102	-
Opitutae bacterium UBA4583	1948725	PRJNA348753	348753	PVC group	Verrucomicrobia	1.62053	41.1	-	DGJZ01	207	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453608	GCA_002386865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/865/GCA_002386865.1_ASM238686v1	28894102	-
Gammaproteobacteria bacterium UBA4582	1948624	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.40547	52.3	-	DGKA01	304	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453607	GCA_002386885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/885/GCA_002386885.1_ASM238688v1	28894102	-
Akkermansiaceae bacterium UBA4581	1951362	PRJNA348753	348753	PVC group	Verrucomicrobia	1.64722	38.4	-	DGKB01	57	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453606	GCA_002386905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/905/GCA_002386905.1_ASM238690v1	28894102	-
Proteobacteria bacterium UBA4577	1948177	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	1.07971	39.3	-	DGKF01	101	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450529	GCA_002386925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/925/GCA_002386925.1_ASM238692v1	28894102	-
Proteobacteria bacterium UBA4575	1948176	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	1.3597	45.7	-	DGKH01	83	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450527	GCA_002386945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/945/GCA_002386945.1_ASM238694v1	28894102	-
Nitrospirae bacterium UBA4574	1948119	PRJNA348753	348753	Nitrospirae	unclassified Nitrospirae	1.75917	60	-	DGKI01	75	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450528	GCA_002386965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/965/GCA_002386965.1_ASM238696v1	28894102	-
Propionibacteriaceae bacterium UBA4569	1952960	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.57949	67.4	-	DGKN01	263	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455502	GCA_002387005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/005/GCA_002387005.1_ASM238700v1	28894102	-
Comamonadaceae bacterium UBA4561	1951607	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	4.79219	63.7	-	DGKV01	210	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455510	GCA_002387125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/125/GCA_002387125.1_ASM238712v1	28894102	-
Firmicutes bacterium UBA4557	1948003	PRJNA348753	348753	Terrabacteria group	Firmicutes	4.01323	35.5	-	DGKZ01	41	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456263	GCA_002387185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/185/GCA_002387185.1_ASM238718v1	28894102	-
Bacteroidales bacterium UBA4621	1950579	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.99027	48.9	-	DGIN01	103	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455122	GCA_002387325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/325/GCA_002387325.1_ASM238732v1	28894102	-
Enterobacteriaceae bacterium UBA4613	1951689	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.97092	57.1	-	DGIV01	61	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457686	GCA_002387405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/405/GCA_002387405.1_ASM238740v1	28894102	-
Rhodobacterales bacterium UBA4593	1951233	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.71951	52.8	-	DGJP01	148	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452771	GCA_002387535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/535/GCA_002387535.1_ASM238753v1	28894102	-
Akkermansiaceae bacterium UBA4589	1951363	PRJNA348753	348753	PVC group	Verrucomicrobia	1.48955	40.1	-	DGJT01	63	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453614	GCA_002387565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/565/GCA_002387565.1_ASM238756v1	28894102	-
Flavobacteriaceae bacterium UBA4590	1951854	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.5664	38.6	-	DGJS01	163	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452774	GCA_002387575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/575/GCA_002387575.1_ASM238757v1	28894102	-
Alphaproteobacteria bacterium UBA4588	1948399	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.03739	48.4	-	DGJU01	92	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453613	GCA_002387605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/605/GCA_002387605.1_ASM238760v1	28894102	-
Flavobacteriales bacterium UBA4585	1951023	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.69664	44	-	DGJX01	169	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453610	GCA_002387615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/615/GCA_002387615.1_ASM238761v1	28894102	-
Saccharospirillaceae bacterium UBA4579	1953072	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.79432	53.4	-	DGKD01	225	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450531	GCA_002387655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/655/GCA_002387655.1_ASM238765v1	28894102	-
Flavobacteriales bacterium UBA4580	1951022	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.65935	50.3	-	DGKC01	166	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453605	GCA_002387645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/645/GCA_002387645.1_ASM238764v1	28894102	-
Oceanospirillaceae bacterium UBA4576	1952990	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.2477	45	-	DGKG01	187	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450530	GCA_002387685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/685/GCA_002387685.1_ASM238768v1	28894102	-
Cellvibrionales bacterium UBA4578	1950795	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.1909	47.5	-	DGKE01	263	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450532	GCA_002387705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/705/GCA_002387705.1_ASM238770v1	28894102	-
Bacteriovoracaceae bacterium UBA4573	1961486	PRJNA348753	348753	Proteobacteria	Oligoflexia	2.79768	47.9	-	DGKJ01	123	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450525	GCA_002387735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/735/GCA_002387735.1_ASM238773v1	28894102	-
Nitrospirae bacterium UBA4572	1948118	PRJNA348753	348753	Nitrospirae	unclassified Nitrospirae	1.88691	59.4	-	DGKK01	74	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450526	GCA_002387725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/725/GCA_002387725.1_ASM238772v1	28894102	-
Enterobacteriaceae bacterium UBA4544	1951687	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.69636	56.3	-	DGLM01	166	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451165	GCA_002387975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/975/GCA_002387975.1_ASM238797v1	28894102	-
Pseudomonadaceae bacterium UBA4539	1952780	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.22432	61.3	-	DGLR01	55	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451052	GCA_002388045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/045/GCA_002388045.1_ASM238804v1	28894102	-
Clostridiaceae bacterium UBA4536	1951573	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.98558	43.2	-	DGLU01	68	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451047	GCA_002388085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/085/GCA_002388085.1_ASM238808v1	28894102	-
Enterobacteriaceae bacterium UBA4534	1951686	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.45085	55.5	-	DGLW01	40	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451499	GCA_002388125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/125/GCA_002388125.1_ASM238812v1	28894102	-
Erythrobacteraceae bacterium UBA4528	1951759	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.53376	63	-	DGMC01	220	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456088	GCA_002388245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/245/GCA_002388245.1_ASM238824v1	28894102	-
Balneolaceae bacterium UBA4522	1951509	PRJNA348753	348753	Balneolaeota	Balneolia	3.24491	37.4	-	DGMI01	21	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456080	GCA_002388325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/325/GCA_002388325.1_ASM238832v1	28894102	-
Flavobacteriaceae bacterium UBA4518	1951852	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.95357	34.8	-	DGMM01	93	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450759	GCA_002388405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/405/GCA_002388405.1_ASM238840v1	28894102	-
Gammaproteobacteria bacterium UBA4514	1948623	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.39428	57.5	-	DGMQ01	42	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450823	GCA_002388485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/485/GCA_002388485.1_ASM238848v1	28894102	-
Balneolaceae bacterium UBA4511	1951508	PRJNA348753	348753	Balneolaeota	Balneolia	3.24643	37.5	-	DGMT01	13	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450762	GCA_002388535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/535/GCA_002388535.1_ASM238853v1	28894102	-
Flavobacteriales bacterium UBA4507	1951021	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.3508	36	-	DGMX01	47	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455776	GCA_002388645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/645/GCA_002388645.1_ASM238864v1	28894102	-
Opitutae bacterium UBA4506	1948724	PRJNA348753	348753	PVC group	Verrucomicrobia	4.02943	54.2	-	DGMY01	95	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455775	GCA_002388665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/665/GCA_002388665.1_ASM238866v1	28894102	-
Flavobacteriaceae bacterium UBA4504	1951851	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.03347	37.4	-	DGNA01	126	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455773	GCA_002388705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/705/GCA_002388705.1_ASM238870v1	28894102	-
Erythrobacteraceae bacterium UBA4503	1951758	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.97931	63.1	-	DGNB01	177	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455772	GCA_002388725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/725/GCA_002388725.1_ASM238872v1	28894102	-
Gammaproteobacteria bacterium UBA4501	1948622	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.55131	55.3	-	DGND01	20	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455770	GCA_002388765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/765/GCA_002388765.1_ASM238876v1	28894102	-
Halieaceae bacterium UBA4500	1951915	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.89443	61.3	-	DGNE01	19	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455769	GCA_002388785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/785/GCA_002388785.1_ASM238878v1	28894102	-
Balneolaceae bacterium UBA4499	1951507	PRJNA348753	348753	Balneolaeota	Balneolia	3.24307	37.5	-	DGNF01	12	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450416	GCA_002388805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/805/GCA_002388805.1_ASM238880v1	28894102	-
Proteobacteria bacterium UBA4498	1948175	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	3.50347	59.7	-	DGNG01	23	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450415	GCA_002388825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/825/GCA_002388825.1_ASM238882v1	28894102	-
Flavobacteriaceae bacterium UBA4525	1951853	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.14129	36.1	-	DGMF01	20	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456087	GCA_002388845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/845/GCA_002388845.1_ASM238884v1	28894102	-
Parvularculaceae bacterium UBA4496	1953057	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.40054	57	-	DGNI01	213	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450407	GCA_002388885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/885/GCA_002388885.1_ASM238888v1	28894102	-
Cellvibrionales bacterium UBA4495	1950794	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.38349	60.9	-	DGNJ01	132	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450410	GCA_002388905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/905/GCA_002388905.1_ASM238890v1	28894102	-
Thiotrichaceae bacterium UBA4486	1953014	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.21417	54	-	DGNS01	19	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456371	GCA_002389045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/045/GCA_002389045.1_ASM238904v1	28894102	-
Rhodospirillaceae bacterium UBA4479	1952857	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.77169	51.9	-	DGNZ01	446	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457199	GCA_002389175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/175/GCA_002389175.1_ASM238917v1	28894102	-
Cellvibrionales bacterium UBA4478	1950793	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.20763	47.6	-	DGOA01	190	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457198	GCA_002389205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/205/GCA_002389205.1_ASM238920v1	28894102	-
Flavobacteriales bacterium UBA4477	1951020	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.23721	43.7	-	DGOB01	221	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457207	GCA_002389225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/225/GCA_002389225.1_ASM238922v1	28894102	-
Flavobacteriaceae bacterium UBA4476	1951850	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.44023	40.7	-	DGOC01	132	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457206	GCA_002389235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/235/GCA_002389235.1_ASM238923v1	28894102	-
Gammaproteobacteria bacterium UBA4475	1948621	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.84537	52.4	-	DGOD01	389	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457205	GCA_002389265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/265/GCA_002389265.1_ASM238926v1	28894102	-
Flavobacteriales bacterium UBA4474	1951019	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.54128	58.6	-	DGOE01	185	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457204	GCA_002389295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/295/GCA_002389295.1_ASM238929v1	28894102	-
Patescibacteria group bacterium UBA4473	1948817	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	1.2229	44.1	-	DGOF01	46	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457203	GCA_002389285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/285/GCA_002389285.1_ASM238928v1	28894102	-
Gammaproteobacteria bacterium UBA4472	1948620	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.04916	52.8	-	DGOG01	177	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457202	GCA_002389325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/325/GCA_002389325.1_ASM238932v1	28894102	-
Flavobacteriales bacterium UBA4471	1951018	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.9846	50.3	-	DGOH01	192	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457201	GCA_002389345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/345/GCA_002389345.1_ASM238934v1	28894102	-
Opitutae bacterium UBA4470	1948723	PRJNA348753	348753	PVC group	Verrucomicrobia	2.24174	51.5	-	DGOI01	149	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457200	GCA_002389355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/355/GCA_002389355.1_ASM238935v1	28894102	-
Rhodospirillaceae bacterium UBA4468	1952856	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.93405	49.2	-	DGOK01	148	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452115	GCA_002389385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/385/GCA_002389385.1_ASM238938v1	28894102	-
Flavobacteriaceae bacterium UBA4463	1951848	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.61245	35.5	-	DGOP01	95	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452116	GCA_002389405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/405/GCA_002389405.1_ASM238940v1	28894102	-
Flavobacteriales bacterium UBA4466	1951016	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.75351	35.2	-	DGOM01	132	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450374	GCA_002389415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/415/GCA_002389415.1_ASM238941v1	28894102	-
Acidimicrobiia bacterium UBA4461	1948318	PRJNA348753	348753	Terrabacteria group	Actinobacteria	3.82586	54.1	-	DGOR01	188	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452118	GCA_002389445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/445/GCA_002389445.1_ASM238944v1	28894102	-
Bacteroidales bacterium UBA4459	1950578	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.71027	41.8	-	DGOT01	302	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457463	GCA_002389465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/465/GCA_002389465.1_ASM238946v1	28894102	-
Flavobacteriales bacterium UBA4454	1951015	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.76415	44.6	-	DGOY01	73	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451825	GCA_002389475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/475/GCA_002389475.1_ASM238947v1	28894102	-
Halieaceae bacterium UBA4452	1951913	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.77626	53.2	-	DGPA01	47	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451806	GCA_002389505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/505/GCA_002389505.1_ASM238950v1	28894102	-
Gammaproteobacteria bacterium UBA4450	1948619	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.13187	52.8	-	DGPC01	186	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455919	GCA_002389525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/525/GCA_002389525.1_ASM238952v1	28894102	-
Flavobacteriaceae bacterium UBA4449	1951847	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.51234	38.6	-	DGPD01	147	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454676	GCA_002389535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/535/GCA_002389535.1_ASM238953v1	28894102	-
Flavobacteriales bacterium UBA4446	1951014	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.18963	43.7	-	DGPG01	98	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453006	GCA_002389565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/565/GCA_002389565.1_ASM238956v1	28894102	-
Flavobacteriales bacterium UBA4437	1951011	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.76243	50.2	-	DGPP01	196	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454392	GCA_002389585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/585/GCA_002389585.1_ASM238958v1	28894102	-
Oceanospirillaceae bacterium UBA4431	1952989	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.14028	44.9	-	DGPV01	191	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456578	GCA_002389605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/605/GCA_002389605.1_ASM238960v1	28894102	-
Halieaceae bacterium UBA4423	1951911	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.62062	53.5	-	DGQD01	137	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455778	GCA_002389625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/625/GCA_002389625.1_ASM238962v1	28894102	-
Flavobacteriales bacterium UBA4422	1951007	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.87755	39.7	-	DGQE01	41	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451608	GCA_002389645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/645/GCA_002389645.1_ASM238964v1	28894102	-
Rhodobiaceae bacterium UBA4490	1952826	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.44795	60.9	-	DGNO01	6	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450413	GCA_002389665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/665/GCA_002389665.1_ASM238966v1	28894102	-
Gammaproteobacteria bacterium UBA4421	1948616	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.06832	51.6	-	DGQF01	62	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451609	GCA_002389675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/675/GCA_002389675.1_ASM238967v1	28894102	-
Rhodospirillaceae bacterium UBA4420	1952855	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.63396	49.6	-	DGQG01	177	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455781	GCA_002389715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/715/GCA_002389715.1_ASM238971v1	28894102	-
Bacteroidales bacterium UBA4417	1950577	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.73606	43.5	-	DGQJ01	412	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456924	GCA_002389705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/705/GCA_002389705.1_ASM238970v1	28894102	-
Bacteroidetes bacterium UBA4415	1953160	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.44389	50.7	-	DGQL01	69	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456926	GCA_002389745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/745/GCA_002389745.1_ASM238974v1	28894102	-
Bacteroidetes bacterium UBA4414	1953159	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.84502	42.3	-	DGQM01	31	-	-	9/28/17	9/28/17	Contig	University of Queensland	SAMN06456925	GCA_002389765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/765/GCA_002389765.1_ASM238976v1	28894102	-
Bacteroidetes bacterium UBA4408	1953158	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.65185	36.8	-	DGQS01	259	-	-	9/28/17	9/28/17	Contig	University of Queensland	SAMN06451899	GCA_002389785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/785/GCA_002389785.1_ASM238978v1	28894102	-
Elusimicrobia bacterium UBA4386	1947920	PRJNA348753	348753	Elusimicrobia	unclassified Elusimicrobia	1.78064	32.3	-	DGRO01	56	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457220	GCA_002389965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/965/GCA_002389965.1_ASM238996v1	28894102	-
Lachnospiraceae bacterium UBA4380	1952094	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.90012	53.1	-	DGRU01	229	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457226	GCA_002390025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/025/GCA_002390025.1_ASM239002v1	28894102	-
Halieaceae bacterium UBA4469	1951914	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.76788	53.2	-	DGOJ01	76	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452114	GCA_002390055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/055/GCA_002390055.1_ASM239005v1	28894102	-
Flavobacteriales bacterium UBA4467	1951017	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.64542	44.5	-	DGOL01	152	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450372	GCA_002390065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/065/GCA_002390065.1_ASM239006v1	28894102	-
Flammeovirgaceae bacterium UBA4465	1951782	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.52058	38.5	-	DGON01	267	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450375	GCA_002390105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/105/GCA_002390105.1_ASM239010v1	28894102	-
Flavobacteriaceae bacterium UBA4464	1951849	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.58096	38.5	-	DGOO01	171	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452123	GCA_002390125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/125/GCA_002390125.1_ASM239012v1	28894102	-
Dehalococcoidia bacterium UBA4462	1948502	PRJNA348753	348753	Terrabacteria group	Chloroflexi	1.14118	49.3	-	DGOQ01	125	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452117	GCA_002390145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/145/GCA_002390145.1_ASM239014v1	28894102	-
Hyphomicrobiaceae bacterium UBA4460	1951937	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	1.24235	63.4	-	DGOS01	122	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450718	GCA_002390155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/155/GCA_002390155.1_ASM239015v1	28894102	-
Proteobacteria bacterium UBA4457	1948174	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	2.16865	43.7	-	DGOV01	144	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451823	GCA_002390205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/205/GCA_002390205.1_ASM239020v1	28894102	-
Gemmatimonadales bacterium UBA4456	1951116	PRJNA348753	348753	FCB group	Gemmatimonadetes	3.01816	62.7	-	DGOW01	111	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457458	GCA_002390225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/225/GCA_002390225.1_ASM239022v1	28894102	-
Proteobacteria bacterium UBA4455	1948173	PRJNA348753	348753	Proteobacteria	unclassified Proteobacteria	4.69055	57	-	DGOX01	50	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457461	GCA_002390245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/245/GCA_002390245.1_ASM239024v1	28894102	-
Opitutae bacterium UBA4453	1948722	PRJNA348753	348753	PVC group	Verrucomicrobia	2.21738	51.5	-	DGOZ01	180	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457455	GCA_002390255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/255/GCA_002390255.1_ASM239025v1	28894102	-
Cellvibrionales bacterium UBA4451	1950792	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.06698	47.6	-	DGPB01	20	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457457	GCA_002390285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/285/GCA_002390285.1_ASM239028v1	28894102	-
Micrococcales bacterium UBA4448	1951172	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.18764	51.3	-	DGPE01	93	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454677	GCA_002390305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/305/GCA_002390305.1_ASM239030v1	28894102	-
Saprospiraceae bacterium UBA4447	1952879	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.36698	36.1	-	DGPF01	114	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453004	GCA_002390325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/325/GCA_002390325.1_ASM239032v1	28894102	-
Flavobacteriales bacterium UBA4445	1951013	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.87105	39.8	-	DGPH01	59	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454668	GCA_002390335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/335/GCA_002390335.1_ASM239033v1	28894102	-
Actinobacteria bacterium UBA4444	1948340	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.63086	52.9	-	DGPI01	132	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454669	GCA_002390365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/365/GCA_002390365.1_ASM239036v1	28894102	-
Gammaproteobacteria bacterium UBA4443	1948618	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.70033	52.2	-	DGPJ01	383	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454674	GCA_002390385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/385/GCA_002390385.1_ASM239038v1	28894102	-
Flavobacteriales bacterium UBA4442	1951012	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.27449	50.6	-	DGPK01	179	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454675	GCA_002390405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/405/GCA_002390405.1_ASM239040v1	28894102	-
Kordiimonadaceae bacterium UBA4441	1951965	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.61215	39.9	-	DGPL01	60	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454672	GCA_002390425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/425/GCA_002390425.1_ASM239042v1	28894102	-
Opitutae bacterium UBA4440	1948721	PRJNA348753	348753	PVC group	Verrucomicrobia	1.72738	51.1	-	DGPM01	191	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454673	GCA_002390445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/445/GCA_002390445.1_ASM239044v1	28894102	-
Flavobacteriaceae bacterium UBA4439	1951846	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.74487	39.6	-	DGPN01	66	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454401	GCA_002390455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/455/GCA_002390455.1_ASM239045v1	28894102	-
Halieaceae bacterium UBA4438	1951912	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.39279	53.4	-	DGPO01	132	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454400	GCA_002390485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/485/GCA_002390485.1_ASM239048v1	28894102	-
Alphaproteobacteria bacterium UBA4436	1948398	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.02521	48.6	-	DGPQ01	102	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456566	GCA_002390505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/505/GCA_002390505.1_ASM239050v1	28894102	-
Cellvibrionales bacterium UBA4435	1950791	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	1.20259	36.5	-	DGPR01	52	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456565	GCA_002390525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/525/GCA_002390525.1_ASM239052v1	28894102	-
Flavobacteriales bacterium UBA4434	1951010	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.37928	44.6	-	DGPS01	24	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456564	GCA_002390535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/535/GCA_002390535.1_ASM239053v1	28894102	-
Gammaproteobacteria bacterium UBA4433	1948617	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.95106	47.8	-	DGPT01	145	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454396	GCA_002390555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/555/GCA_002390555.1_ASM239055v1	28894102	-
Flavobacteriaceae bacterium UBA4432	1951845	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.67342	38.3	-	DGPU01	142	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454395	GCA_002390585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/585/GCA_002390585.1_ASM239058v1	28894102	-
Flavobacteriaceae bacterium UBA4430	1951844	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.71414	35.3	-	DGPW01	125	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456575	GCA_002390605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/605/GCA_002390605.1_ASM239060v1	28894102	-
Flavobacteriales bacterium UBA4429	1951009	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.42842	49.6	-	DGPX01	252	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451613	GCA_002390615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/615/GCA_002390615.1_ASM239061v1	28894102	-
Flavobacteriales bacterium UBA4428	1951008	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.55137	58.6	-	DGPY01	254	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451614	GCA_002390645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/645/GCA_002390645.1_ASM239064v1	28894102	-
Flavobacteriaceae bacterium UBA4425	1951843	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.50603	38.9	-	DGQB01	124	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451605	GCA_002390665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/665/GCA_002390665.1_ASM239066v1	28894102	-
Deltaproteobacteria bacterium UBA4427	1948547	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	4.85719	59.1	-	DGPZ01	208	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451213	GCA_002390675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/675/GCA_002390675.1_ASM239067v1	28894102	-
Actinobacteria bacterium UBA4426	1948339	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.07015	53.4	-	DGQA01	56	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451604	GCA_002390705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/705/GCA_002390705.1_ASM239070v1	28894102	-
Opitutae bacterium UBA4424	1948720	PRJNA348753	348753	PVC group	Verrucomicrobia	2.10141	51.4	-	DGQC01	223	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451606	GCA_002390725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/725/GCA_002390725.1_ASM239072v1	28894102	-
Bacteroidetes bacterium UBA4416	1953161	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	5.18111	48.3	-	DGQK01	79	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456923	GCA_002390745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/745/GCA_002390745.1_ASM239074v1	28894102	-
Flavobacteriales bacterium UBA4418	1951005	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.42594	39.5	-	DGQI01	92	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456921	GCA_002390775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/775/GCA_002390775.1_ASM239077v1	28894102	-
Flavobacteriales bacterium UBA4419	1951006	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.70964	44.6	-	DGQH01	28	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456922	GCA_002390765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/765/GCA_002390765.1_ASM239076v1	28894102	-
Chitinophagaceae bacterium UBA4413	1951560	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.73511	38.4	-	DGQN01	47	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456928	GCA_002390805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/805/GCA_002390805.1_ASM239080v1	28894102	-
Chitinophagaceae bacterium UBA4407	1951557	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	5.8285	39.2	-	DGQT01	121	-	-	9/28/17	9/28/17	Contig	University of Queensland	SAMN06454090	GCA_002390845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/845/GCA_002390845.1_ASM239084v1	28894102	-
Bacillales bacterium UBA4401	1950280	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.02879	38.2	-	DGQZ01	102	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451890	GCA_002390925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/925/GCA_002390925.1_ASM239092v1	28894102	-
bacterium UBA4392	1947801	PRJNA348753	348753	unclassified Bacteria	unclassified Bacteria (miscellaneous)	4.72009	63.9	-	DGRI01	410	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452119	GCA_002391025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/025/GCA_002391025.1_ASM239102v1	28894102	-
Candidatus Saccharibacteria bacterium UBA4387	1953342	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.71287	48.8	-	DGRN01	32	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457221	GCA_002391075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/075/GCA_002391075.1_ASM239107v1	28894102	-
Lachnospiraceae bacterium UBA4381	1952095	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.37377	40.6	-	DGRT01	177	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457227	GCA_002391105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/105/GCA_002391105.1_ASM239110v1	28894102	-
Lachnospiraceae bacterium UBA4378	1952093	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.47872	53	-	DGRW01	50	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451336	GCA_002391125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/125/GCA_002391125.1_ASM239112v1	28894102	-
Atopobiaceae bacterium UBA4384	1951458	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.08446	65	-	DGRQ01	133	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457222	GCA_002391145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/145/GCA_002391145.1_ASM239114v1	28894102	-
Prevotellaceae bacterium UBA4374	1952501	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.77772	47.5	-	DGSA01	99	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451344	GCA_002391265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/265/GCA_002391265.1_ASM239126v1	28894102	-
Prevotellaceae bacterium UBA4372	1952500	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.24882	50.2	-	DGSC01	70	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451338	GCA_002391275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/275/GCA_002391275.1_ASM239127v1	28894102	-
Prevotellaceae bacterium UBA4371	1952499	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.28169	46.3	-	DGSD01	211	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451339	GCA_002391305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/305/GCA_002391305.1_ASM239130v1	28894102	-
Bacteroidales bacterium UBA3916	1950535	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.1594	28.6	-	DGEW01	161	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455014	GCA_002391355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/355/GCA_002391355.1_ASM239135v1	28894102	-
Bacteroidales bacterium UBA4369	1950576	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.38666	40.7	-	DGSF01	44	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454122	GCA_002391345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/345/GCA_002391345.1_ASM239134v1	28894102	-
Firmicutes bacterium UBA3914	1947981	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.14718	58.4	-	DGEY01	102	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455016	GCA_002391385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/385/GCA_002391385.1_ASM239138v1	28894102	-
Firmicutes bacterium UBA3915	1947982	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.17093	46.8	-	DGEX01	81	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455017	GCA_002391395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/395/GCA_002391395.1_ASM239139v1	28894102	-
Micrococcales bacterium UBA3913	1951170	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.60581	64	-	DGEZ01	155	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455011	GCA_002391425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/425/GCA_002391425.1_ASM239142v1	28894102	-
Ruminococcaceae bacterium UBA3912	1952326	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.58589	47.5	-	DGFA01	159	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455010	GCA_002391435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/435/GCA_002391435.1_ASM239143v1	28894102	-
Firmicutes bacterium UBA3910	1947980	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.89735	51.8	-	DGFC01	186	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455012	GCA_002391465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/465/GCA_002391465.1_ASM239146v1	28894102	-
Bacteroidales bacterium UBA3911	1950534	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.82092	28.7	-	DGFB01	207	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455013	GCA_002391485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/485/GCA_002391485.1_ASM239148v1	28894102	-
Competibacteraceae bacterium UBA3908	1951621	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.59221	63	-	DGFE01	270	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457576	GCA_002391525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/525/GCA_002391525.1_ASM239152v1	28894102	-
Firmicutes bacterium UBA3906	1947978	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.87922	39.9	-	DGFG01	171	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457580	GCA_002391555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/555/GCA_002391555.1_ASM239155v1	28894102	-
Firmicutes bacterium UBA3907	1947979	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.70541	44.3	-	DGFF01	140	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457579	GCA_002391545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/545/GCA_002391545.1_ASM239154v1	28894102	-
Anaerolineales bacterium UBA3905	1950206	PRJNA348753	348753	Terrabacteria group	Chloroflexi	5.86428	60.2	-	DGFH01	391	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457577	GCA_002391565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/565/GCA_002391565.1_ASM239156v1	28894102	-
Firmicutes bacterium UBA3904	1947977	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.88698	55.5	-	DGFI01	129	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457578	GCA_002391605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/605/GCA_002391605.1_ASM239160v1	28894102	-
Ruminococcaceae bacterium UBA3903	1952325	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.88249	38	-	DGFJ01	44	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457583	GCA_002391625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/625/GCA_002391625.1_ASM239162v1	28894102	-
Firmicutes bacterium UBA3902	1947976	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.19384	51	-	DGFK01	129	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457584	GCA_002391635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/635/GCA_002391635.1_ASM239163v1	28894102	-
Firmicutes bacterium UBA3901	1947975	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.56207	47.8	-	DGFL01	145	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457581	GCA_002391665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/665/GCA_002391665.1_ASM239166v1	28894102	-
Cloacimonetes bacterium UBA3900	1947846	PRJNA348753	348753	FCB group	Candidatus Cloacimonetes	1.98854	50.1	-	DGFM01	53	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457582	GCA_002391675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/675/GCA_002391675.1_ASM239167v1	28894102	-
Firmicutes bacterium UBA3899	1947974	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.08342	58.3	-	DGFN01	100	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453097	GCA_002391705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/705/GCA_002391705.1_ASM239170v1	28894102	-
Enterobacteriaceae bacterium UBA3894	1951684	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.35435	56.3	-	DGFS01	16	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453102	GCA_002391805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/805/GCA_002391805.1_ASM239180v1	28894102	-
Enterococcaceae bacterium UBA3893	1951731	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.65843	37.4	-	DGFT01	161	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453103	GCA_002391825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/825/GCA_002391825.1_ASM239182v1	28894102	-
Flavobacteriales bacterium UBA3891	1950999	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.85982	35.9	-	DGFV01	41	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453105	GCA_002391865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/865/GCA_002391865.1_ASM239186v1	28894102	-
Staphylococcaceae bacterium UBA3889	1953009	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.8573	36.6	-	DGFX01	118	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453881	GCA_002391905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/905/GCA_002391905.1_ASM239190v1	28894102	-
Enterobacteriaceae bacterium UBA3874	1951683	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.27079	54.2	-	DGGM01	19	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452810	GCA_002392205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/205/GCA_002392205.1_ASM239220v1	28894102	-
Firmicutes bacterium UBA3871	1947973	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.47947	47.7	-	DGGP01	176	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452813	GCA_002392265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/265/GCA_002392265.1_ASM239226v1	28894102	-
Verrucomicrobia bacterium UBA3869	1948262	PRJNA348753	348753	PVC group	Verrucomicrobia	0.709758	43.5	-	DGGR01	46	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453650	GCA_002392285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/285/GCA_002392285.1_ASM239228v1	28894102	-
Bacteroidales bacterium UBA3868	1950533	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.95067	48.2	-	DGGS01	235	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453649	GCA_002392325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/325/GCA_002392325.1_ASM239232v1	28894102	-
Lachnospiraceae bacterium UBA3866	1952073	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.21365	34.7	-	DGGU01	63	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453645	GCA_002392345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/345/GCA_002392345.1_ASM239234v1	28894102	-
Lachnospiraceae bacterium UBA3865	1952072	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.04525	38.5	-	DGGV01	172	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453648	GCA_002392355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/355/GCA_002392355.1_ASM239235v1	28894102	-
Lachnospiraceae bacterium UBA3863	1952071	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.39907	59.5	-	DGGX01	252	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453642	GCA_002392385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/385/GCA_002392385.1_ASM239238v1	28894102	-
Lachnospiraceae bacterium UBA3861	1952070	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.5767	40.3	-	DGGZ01	92	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453644	GCA_002392425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/425/GCA_002392425.1_ASM239242v1	28894102	-
Bacteroidales bacterium UBA3860	1950532	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.74952	49.5	-	DGHA01	122	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453643	GCA_002392445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/445/GCA_002392445.1_ASM239244v1	28894102	-
Clostridiales bacterium UBA3858	1950870	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.87448	60.7	-	DGHC01	184	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452537	GCA_002392485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/485/GCA_002392485.1_ASM239248v1	28894102	-
Bacteroidales bacterium UBA3856	1950531	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.89641	56.5	-	DGHE01	228	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452543	GCA_002392525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/525/GCA_002392525.1_ASM239252v1	28894102	-
Bacillales bacterium UBA3853	1950270	PRJNA348753	348753	Terrabacteria group	Firmicutes	0.87084	36.1	-	DGHH01	11	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453615	GCA_002392585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/585/GCA_002392585.1_ASM239258v1	28894102	-
Oscillospiraceae bacterium UBA3851	1952968	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.83745	61.3	-	DGHJ01	154	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453617	GCA_002392625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/625/GCA_002392625.1_ASM239262v1	28894102	-
Prevotellaceae bacterium UBA3849	1952487	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.96951	47.1	-	DGHL01	121	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453328	GCA_002392645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/645/GCA_002392645.1_ASM239264v1	28894102	-
Lachnospiraceae bacterium UBA3850	1952069	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.69396	40.5	-	DGHK01	65	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454555	GCA_002392655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/655/GCA_002392655.1_ASM239265v1	28894102	-
Lachnospiraceae bacterium UBA3845	1952067	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.6175	54.2	-	DGHP01	198	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453334	GCA_002392705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/705/GCA_002392705.1_ASM239270v1	28894102	-
Bacteroidales bacterium UBA3843	1950529	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.28184	49.3	-	DGHR01	20	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453332	GCA_002392745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/745/GCA_002392745.1_ASM239274v1	28894102	-
Verrucomicrobia bacterium UBA3841	1948261	PRJNA348753	348753	PVC group	Verrucomicrobia	3.04717	58.8	-	DGHT01	72	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453330	GCA_002392765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/765/GCA_002392765.1_ASM239276v1	28894102	-
Prevotellaceae bacterium UBA3839	1952486	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.2395	47.5	-	DGHV01	229	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451317	GCA_002392805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/805/GCA_002392805.1_ASM239280v1	28894102	-
Verrucomicrobia bacterium UBA3838	1948260	PRJNA348753	348753	PVC group	Verrucomicrobia	2.85478	60.9	-	DGHW01	67	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451318	GCA_002392825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/825/GCA_002392825.1_ASM239282v1	28894102	-
Lachnospiraceae bacterium UBA3847	1952068	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.12102	44.3	-	DGHN01	276	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453336	GCA_002392885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/885/GCA_002392885.1_ASM239288v1	28894102	-
Bacteroidales bacterium UBA3842	1950528	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.70457	52.5	-	DGHS01	33	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453331	GCA_002392905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/905/GCA_002392905.1_ASM239290v1	28894102	-
Bacteroidales bacterium UBA3844	1950530	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.78424	40.7	-	DGHQ01	60	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453333	GCA_002392915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/915/GCA_002392915.1_ASM239291v1	28894102	-
Bacillales bacterium UBA3835	1950269	PRJNA348753	348753	Terrabacteria group	Firmicutes	0.986685	33.1	-	DGHZ01	69	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451313	GCA_002392945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/945/GCA_002392945.1_ASM239294v1	28894102	-
Bacteroidales bacterium UBA3834	1950527	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.09633	54.1	-	DGIA01	40	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451314	GCA_002392965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/965/GCA_002392965.1_ASM239296v1	28894102	-
Elusimicrobia bacterium UBA3832	1947919	PRJNA348753	348753	Elusimicrobia	unclassified Elusimicrobia	1.80133	32.1	-	DGIC01	12	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451312	GCA_002392975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/975/GCA_002392975.1_ASM239297v1	28894102	-
Bacteroidales bacterium UBA3831	1950526	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.84866	58.2	-	DGID01	197	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451309	GCA_002393005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/005/GCA_002393005.1_ASM239300v1	28894102	-
Holosporaceae bacterium UBA3830	1951932	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	1.03984	38.5	-	DGIE01	103	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451310	GCA_002393025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/025/GCA_002393025.1_ASM239302v1	28894102	-
Lachnospiraceae bacterium UBA3828	1952066	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.12872	49	-	DGIG01	278	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456333	GCA_002393035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/035/GCA_002393035.1_ASM239303v1	28894102	-
Alphaproteobacteria bacterium UBA3864	1948396	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	1.88637	53.8	-	DGGW01	91	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453647	GCA_002393065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/065/GCA_002393065.1_ASM239306v1	28894102	-
Lachnospiraceae bacterium UBA3826	1952065	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.10504	45.5	-	DGII01	174	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456335	GCA_002393095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/095/GCA_002393095.1_ASM239309v1	28894102	-
Candidatus Saccharibacteria bacterium UBA3829	1953339	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.65663	48.4	-	DGIF01	60	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456334	GCA_002393165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/165/GCA_002393165.1_ASM239316v1	28894102	-
Bacteroidales bacterium UBA3824	1950525	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.18324	46.1	-	DGIK01	232	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456337	GCA_002393195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/195/GCA_002393195.1_ASM239319v1	28894102	-
Desulfovibrionaceae bacterium UBA3867	1961563	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.53012	65	-	DGGT01	291	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453646	GCA_002393285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/285/GCA_002393285.1_ASM239328v1	28894102	-
Rhodospirillaceae bacterium UBA4492	1952858	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.96441	63.5	-	DGNM01	15	-	-	9/28/17	9/28/17	Contig	University of Queensland	SAMN06450411	GCA_002393305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/305/GCA_002393305.1_ASM239330v1	28894102	-
Pseudomonadaceae bacterium UBA4526	1952779	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.39661	60.9	-	DGME01	122	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456084	GCA_002393335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/335/GCA_002393335.1_ASM239333v1	28894102	-
Clostridiales bacterium UBA4367	1950881	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.49984	55.3	-	DGSH01	77	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454130	GCA_002393545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/545/GCA_002393545.1_ASM239354v1	28894102	-
Prevotellaceae bacterium UBA4361	1952498	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.57285	47.3	-	DGSN01	83	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454124	GCA_002393575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/575/GCA_002393575.1_ASM239357v1	28894102	-
Prevotellaceae bacterium UBA4359	1952497	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.01921	51.1	-	DGSP01	93	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451611	GCA_002393555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/555/GCA_002393555.1_ASM239355v1	28894102	-
Lachnospiraceae bacterium UBA4366	1952091	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.31577	52.1	-	DGSI01	42	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454129	GCA_002393565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/565/GCA_002393565.1_ASM239356v1	28894102	-
Clostridiales bacterium UBA4358	1950879	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.88035	59.8	-	DGSQ01	60	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451612	GCA_002393625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/625/GCA_002393625.1_ASM239362v1	28894102	-
Bacteroidales bacterium UBA4357	1950573	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.44539	49.5	-	DGSR01	9	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452919	GCA_002393655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/655/GCA_002393655.1_ASM239365v1	28894102	-
Lachnospiraceae bacterium UBA4338	1952087	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.05955	38.1	-	DGTK01	17	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452808	GCA_002393735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/735/GCA_002393735.1_ASM239373v1	28894102	-
Bacteroidales bacterium UBA4318	1950565	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.80524	54.7	-	DGUE01	200	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453095	GCA_002393895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/895/GCA_002393895.1_ASM239389v1	28894102	-
Lachnospiraceae bacterium UBA4368	1952092	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.09345	43.9	-	DGSG01	31	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454121	GCA_002393885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/885/GCA_002393885.1_ASM239388v1	28894102	-
Bacillales bacterium UBA4365	1950279	PRJNA348753	348753	Terrabacteria group	Firmicutes	0.70453	36.2	-	DGSJ01	68	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454128	GCA_002393905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/905/GCA_002393905.1_ASM239390v1	28894102	-
Bacteroidales bacterium UBA4360	1950574	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.54247	53.3	-	DGSO01	32	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454123	GCA_002393945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/945/GCA_002393945.1_ASM239394v1	28894102	-
Lachnospiraceae bacterium UBA4364	1952090	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.47271	44	-	DGSK01	68	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454127	GCA_002393955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/955/GCA_002393955.1_ASM239395v1	28894102	-
Clostridiales bacterium UBA4362	1950880	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.66618	29.2	-	DGSM01	136	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454125	GCA_002393975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/975/GCA_002393975.1_ASM239397v1	28894102	-
Bacteroidales bacterium UBA4363	1950575	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.78016	47.4	-	DGSL01	31	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454126	GCA_002393965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/965/GCA_002393965.1_ASM239396v1	28894102	-
Lachnospiraceae bacterium UBA4355	1952089	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.16859	52.3	-	DGST01	114	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451603	GCA_002394035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/035/GCA_002394035.1_ASM239403v1	28894102	-
Bacteroidales bacterium UBA4353	1950572	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.58706	46.8	-	DGSV01	126	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455780	GCA_002394025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/025/GCA_002394025.1_ASM239402v1	28894102	-
Lachnospiraceae bacterium UBA4348	1952088	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.50539	54.4	-	DGTA01	158	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454398	GCA_002394165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/165/GCA_002394165.1_ASM239416v1	28894102	-
Bacteroidales bacterium UBA4351	1950571	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.82634	47.4	-	DGSX01	111	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451607	GCA_002394115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/115/GCA_002394115.1_ASM239411v1	28894102	-
Bacteroidales bacterium UBA4347	1950570	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.03682	57.1	-	DGTB01	225	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454394	GCA_002394185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/185/GCA_002394185.1_ASM239418v1	28894102	-
Bacteroidales bacterium UBA4333	1950568	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.16497	49.4	-	DGTP01	19	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452803	GCA_002394335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/335/GCA_002394335.1_ASM239433v1	28894102	-
Prevotellaceae bacterium UBA4334	1952495	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.06537	50.6	-	DGTO01	87	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452802	GCA_002394325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/325/GCA_002394325.1_ASM239432v1	28894102	-
Prevotellaceae bacterium UBA4336	1952496	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.75112	56.3	-	DGTM01	71	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452800	GCA_002394305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/305/GCA_002394305.1_ASM239430v1	28894102	-
Prevotellaceae bacterium UBA4332	1952494	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.56693	46.7	-	DGTQ01	28	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452804	GCA_002394365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/365/GCA_002394365.1_ASM239436v1	28894102	-
Bacteroidales bacterium UBA4331	1950567	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.84625	50.1	-	DGTR01	37	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452805	GCA_002394395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/395/GCA_002394395.1_ASM239439v1	28894102	-
Bacteroidales bacterium UBA4325	1950566	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.52527	48.1	-	DGTX01	151	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453631	GCA_002394445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/445/GCA_002394445.1_ASM239444v1	28894102	-
Lachnospiraceae bacterium UBA4322	1952086	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.98688	45.2	-	DGUA01	226	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453636	GCA_002394505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/505/GCA_002394505.1_ASM239450v1	28894102	-
Lachnospiraceae bacterium UBA4316	1952084	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.11872	44.5	-	DGUG01	235	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453093	GCA_002394535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/535/GCA_002394535.1_ASM239453v1	28894102	-
Lachnospiraceae bacterium UBA4317	1952085	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.53859	57.6	-	DGUF01	293	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453092	GCA_002394525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/525/GCA_002394525.1_ASM239452v1	28894102	-
Prevotellaceae bacterium UBA4315	1952493	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.5482	47.9	-	DGUH01	165	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453090	GCA_002394585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/585/GCA_002394585.1_ASM239458v1	28894102	-
Rickettsiales bacterium UBA4311	1951240	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	1.00998	33.4	-	DGUL01	13	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453086	GCA_002394665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/665/GCA_002394665.1_ASM239466v1	28894102	-
Ruminococcaceae bacterium UBA4306	1952329	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.18101	51.7	-	DGUQ01	207	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453872	GCA_002394725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/725/GCA_002394725.1_ASM239472v1	28894102	-
Clostridiales bacterium UBA4304	1950878	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.63876	61.7	-	DGUS01	67	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453874	GCA_002394755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/755/GCA_002394755.1_ASM239475v1	28894102	-
Prevotellaceae bacterium UBA4303	1952492	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.87867	48.8	-	DGUT01	86	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453877	GCA_002394765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/765/GCA_002394765.1_ASM239476v1	28894102	-
Bacteroidales bacterium UBA4305	1950564	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.26713	59	-	DGUR01	237	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453875	GCA_002394745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/745/GCA_002394745.1_ASM239474v1	28894102	-
Bacteroidales bacterium UBA4298	1950563	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.14287	49.8	-	DGUY01	33	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452654	GCA_002394835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/835/GCA_002394835.1_ASM239483v1	28894102	-
Atopobiaceae bacterium UBA4299	1951457	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.03184	65.4	-	DGUX01	46	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452655	GCA_002394825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/825/GCA_002394825.1_ASM239482v1	28894102	-
Bacteroidales bacterium UBA4287	1950560	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.90335	47.8	-	DGVJ01	138	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456456	GCA_002394915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/915/GCA_002394915.1_ASM239491v1	28894102	-
Clostridiales bacterium UBA4283	1950877	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.58675	55.9	-	DGVN01	139	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456460	GCA_002394985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/985/GCA_002394985.1_ASM239498v1	28894102	-
Lachnospiraceae bacterium UBA4280	1952081	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.1076	45.2	-	DGVQ01	99	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456463	GCA_002395025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/025/GCA_002395025.1_ASM239502v1	28894102	-
Bacillales bacterium UBA4278	1950278	PRJNA348753	348753	Terrabacteria group	Firmicutes	0.944775	36.4	-	DGVS01	13	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452404	GCA_002395065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/065/GCA_002395065.1_ASM239506v1	28894102	-
Rickettsiales bacterium UBA4270	1951239	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	0.721532	27.6	-	DGWA01	15	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452398	GCA_002395105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/105/GCA_002395105.1_ASM239510v1	28894102	-
Bacteroidales bacterium UBA4269	1950558	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.02053	56	-	DGWB01	137	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456228	GCA_002395125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/125/GCA_002395125.1_ASM239512v1	28894102	-
Lachnospiraceae bacterium UBA4265	1952080	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.69689	44.4	-	DGWF01	28	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456220	GCA_002395185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/185/GCA_002395185.1_ASM239518v1	28894102	-
Lachnospiraceae bacterium UBA4260	1952079	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.7449	53.3	-	DGWK01	43	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456225	GCA_002395235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/235/GCA_002395235.1_ASM239523v1	28894102	-
Prevotellaceae bacterium UBA4256	1952488	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.89936	47.9	-	DGWO01	62	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451185	GCA_002395245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/245/GCA_002395245.1_ASM239524v1	28894102	-
Myxococcales bacterium UBA4248	1961467	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	4.60689	47.3	-	DGWW01	357	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455943	GCA_002395385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/385/GCA_002395385.1_ASM239538v1	28894102	-
Bacillales bacterium UBA4244	1950277	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.10218	43.6	-	DGXA01	94	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455951	GCA_002395465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/465/GCA_002395465.1_ASM239546v1	28894102	-
Lachnospiraceae bacterium UBA4237	1952077	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.21076	41	-	DGXH01	80	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450913	GCA_002395545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/545/GCA_002395545.1_ASM239554v1	28894102	-
Bacteroidales bacterium UBA4236	1950555	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.58661	40.8	-	DGXI01	87	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450912	GCA_002395565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/565/GCA_002395565.1_ASM239556v1	28894102	-
Bacteroidales bacterium UBA4230	1950553	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.07647	53.5	-	DGXO01	87	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450918	GCA_002395605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/605/GCA_002395605.1_ASM239560v1	28894102	-
Bacteroidales bacterium UBA4227	1950552	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.08275	56.4	-	DGXR01	147	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455668	GCA_002395625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/625/GCA_002395625.1_ASM239562v1	28894102	-
Lachnospiraceae bacterium UBA4228	1952076	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.94054	53.5	-	DGXQ01	36	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455671	GCA_002395635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/635/GCA_002395635.1_ASM239563v1	28894102	-
Lachnospiraceae bacterium UBA4226	1952075	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.948	44	-	DGXS01	81	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455669	GCA_002395705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/705/GCA_002395705.1_ASM239570v1	28894102	-
Clostridiales bacterium UBA4224	1950876	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.64024	52.1	-	DGXU01	10	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455667	GCA_002395695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/695/GCA_002395695.1_ASM239569v1	28894102	-
Prevotellaceae bacterium UBA4301	1952491	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.13987	53.1	-	DGUV01	99	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453879	GCA_002395775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/775/GCA_002395775.1_ASM239577v1	28894102	-
Bacteroidales bacterium UBA4295	1950562	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.49765	49.5	-	DGVB01	40	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452657	GCA_002395805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/805/GCA_002395805.1_ASM239580v1	28894102	-
Bacteroidales bacterium UBA4293	1950561	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.93837	42.3	-	DGVD01	22	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452663	GCA_002395835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/835/GCA_002395835.1_ASM239583v1	28894102	-
Lachnospiraceae bacterium UBA4292	1952083	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.11461	51.3	-	DGVE01	231	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452662	GCA_002395865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/865/GCA_002395865.1_ASM239586v1	28894102	-
Verrucomicrobia bacterium UBA4286	1948263	PRJNA348753	348753	PVC group	Verrucomicrobia	2.37422	60.7	-	DGVK01	237	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456457	GCA_002395905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/905/GCA_002395905.1_ASM239590v1	28894102	-
Bacteroidales bacterium UBA4284	1950559	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.67196	55.3	-	DGVM01	227	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456459	GCA_002395925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/925/GCA_002395925.1_ASM239592v1	28894102	-
Lachnospiraceae bacterium UBA4281	1952082	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.83311	38.2	-	DGVP01	91	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456462	GCA_002395945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/945/GCA_002395945.1_ASM239594v1	28894102	-
Porphyromonadaceae bacterium UBA4277	1952579	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.47848	51.1	-	DGVT01	137	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452401	GCA_002395965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/965/GCA_002395965.1_ASM239596v1	28894102	-
bacterium UBA4272	1947800	PRJNA348753	348753	unclassified Bacteria	unclassified Bacteria (miscellaneous)	0.970315	49.3	-	DGVY01	69	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452396	GCA_002396045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/045/GCA_002396045.1_ASM239604v1	28894102	-
Eubacteriaceae bacterium UBA4266	1951765	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.30892	53.7	-	DGWE01	112	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456223	GCA_002396065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/065/GCA_002396065.1_ASM239606v1	28894102	-
Porphyromonadaceae bacterium UBA4262	1952578	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.77826	52.8	-	DGWI01	58	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456227	GCA_002396085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/085/GCA_002396085.1_ASM239608v1	28894102	-
Prevotellaceae bacterium UBA4261	1952489	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.29541	47.2	-	DGWJ01	62	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456224	GCA_002396105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/105/GCA_002396105.1_ASM239610v1	28894102	-
Porphyromonadaceae bacterium UBA4259	1952577	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.13462	50.3	-	DGWL01	105	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451178	GCA_002396125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/125/GCA_002396125.1_ASM239612v1	28894102	-
Ruminococcaceae bacterium UBA4257	1952328	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.05129	46.9	-	DGWN01	35	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451186	GCA_002396145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/145/GCA_002396145.1_ASM239614v1	28894102	-
Bacteroidales bacterium UBA4254	1950557	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.83744	58.2	-	DGWQ01	150	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451183	GCA_002396195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/195/GCA_002396195.1_ASM239619v1	28894102	-
Bacteroidales bacterium UBA4243	1950556	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.96164	51.3	-	DGXB01	123	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455944	GCA_002396205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/205/GCA_002396205.1_ASM239620v1	28894102	-
Lachnospiraceae bacterium UBA4239	1952078	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.2256	58.7	-	DGXF01	183	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450911	GCA_002396245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/245/GCA_002396245.1_ASM239624v1	28894102	-
Bacteroidales bacterium UBA4231	1950554	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.63626	57.5	-	DGXN01	36	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450919	GCA_002396335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/335/GCA_002396335.1_ASM239633v1	28894102	-
Bacteroidales bacterium UBA4345	1950569	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.47402	45.3	-	DGTD01	129	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456580	GCA_002396385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/385/GCA_002396385.1_ASM239638v1	28894102	-
Prevotellaceae bacterium UBA4300	1952490	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.34745	46	-	DGUW01	303	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453878	GCA_002396405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/405/GCA_002396405.1_ASM239640v1	28894102	-
Dechloromonas sp. UBA5022	1946403	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	3.5613	61.2	-	DGXW01	176	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450721	GCA_002396465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/465/GCA_002396465.1_ASM239646v1	28894102	-
Spartobacteria bacterium UBA5019	1948749	PRJNA348753	348753	PVC group	Verrucomicrobia	2.77007	55.6	-	DGXZ01	90	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452429	GCA_002396485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/485/GCA_002396485.1_ASM239648v1	28894102	-
Cyanobacteria bacterium UBA5018	1947887	PRJNA348753	348753	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.045	61	-	DGYA01	146	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452430	GCA_002396505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/505/GCA_002396505.1_ASM239650v1	28894102	-
Competibacteraceae bacterium UBA5015	1951623	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.38373	56.3	-	DGYD01	273	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455735	GCA_002396565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/565/GCA_002396565.1_ASM239656v1	28894102	-
Gammaproteobacteria bacterium UBA5014	1948626	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.00336	63	-	DGYE01	202	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452444	GCA_002396585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/585/GCA_002396585.1_ASM239658v1	28894102	-
Flavobacteriales bacterium UBA5013	1951027	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.17083	58.6	-	DGYF01	363	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455741	GCA_002396605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/605/GCA_002396605.1_ASM239660v1	28894102	-
Gammaproteobacteria bacterium UBA5012	1948625	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.00407	62.8	-	DGYG01	203	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455742	GCA_002396625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/625/GCA_002396625.1_ASM239662v1	28894102	-
Firmicutes bacterium UBA5010	1948033	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.30688	33.2	-	DGYI01	74	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455740	GCA_002396645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/645/GCA_002396645.1_ASM239664v1	28894102	-
Bdellovibrionaceae bacterium UBA5009	1961515	PRJNA348753	348753	Proteobacteria	Oligoflexia	3.07596	39.4	-	DGYJ01	127	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450974	GCA_002396665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/665/GCA_002396665.1_ASM239666v1	28894102	-
Patescibacteria group bacterium UBA5007	1948823	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.831293	53.2	-	DGYL01	6	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453253	GCA_002396685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/685/GCA_002396685.1_ASM239668v1	28894102	-
Patescibacteria group bacterium UBA5004	1948821	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.561227	43.3	-	DGYO01	4	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456531	GCA_002396705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/705/GCA_002396705.1_ASM239670v1	28894102	-
Enterococcaceae bacterium UBA5003	1951734	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.54912	40.3	-	DGYP01	38	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450980	GCA_002396745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/745/GCA_002396745.1_ASM239674v1	28894102	-
Ruminococcaceae bacterium UBA4998	1952368	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.34818	43.4	-	DGYU01	133	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455633	GCA_002396785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/785/GCA_002396785.1_ASM239678v1	28894102	-
Firmicutes bacterium UBA4996	1948032	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.4571	45.6	-	DGYW01	75	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455635	GCA_002396805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/805/GCA_002396805.1_ASM239680v1	28894102	-
Ruminococcaceae bacterium UBA4995	1952367	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.69325	58.7	-	DGYX01	164	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455636	GCA_002396825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/825/GCA_002396825.1_ASM239682v1	28894102	-
Thermoanaerobacterales bacterium UBA4994	1951295	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.20381	40.2	-	DGYY01	60	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455637	GCA_002396845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/845/GCA_002396845.1_ASM239684v1	28894102	-
Firmicutes bacterium UBA4992	1948031	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.16921	50.2	-	DGZA01	41	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455639	GCA_002396855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/855/GCA_002396855.1_ASM239685v1	28894102	-
Akkermansiaceae bacterium UBA5020	1951364	PRJNA348753	348753	PVC group	Verrucomicrobia	5.37358	61.3	-	DGXY01	144	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450693	GCA_002396885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/885/GCA_002396885.1_ASM239688v1	28894102	-
Firmicutes bacterium UBA4991	1948030	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.51487	47.2	-	DGZB01	153	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455640	GCA_002396905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/905/GCA_002396905.1_ASM239690v1	28894102	-
Bacteroidales bacterium UBA4989	1950601	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.38402	43.1	-	DGZD01	204	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450879	GCA_002396935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/935/GCA_002396935.1_ASM239693v1	28894102	-
Ruminococcaceae bacterium UBA4986	1952366	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.74036	35.3	-	DGZG01	145	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450882	GCA_002397005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/005/GCA_002397005.1_ASM239700v1	28894102	-
Clostridiaceae bacterium UBA4985	1951580	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.27715	31.6	-	DGZH01	150	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450881	GCA_002397015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/015/GCA_002397015.1_ASM239701v1	28894102	-
Verrucomicrobia bacterium UBA4982	1948265	PRJNA348753	348753	PVC group	Verrucomicrobia	1.70863	50.8	-	DGZK01	68	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450886	GCA_002397065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/065/GCA_002397065.1_ASM239706v1	28894102	-
Firmicutes bacterium UBA4980	1948028	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.59273	58.9	-	DGZM01	190	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450884	GCA_002397075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/075/GCA_002397075.1_ASM239707v1	28894102	-
Ruminococcaceae bacterium UBA4983	1952365	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.49113	50.7	-	DGZJ01	14	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450887	GCA_002397085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/085/GCA_002397085.1_ASM239708v1	28894102	-
Firmicutes bacterium UBA4978	1948027	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.51623	47.5	-	DGZO01	158	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455406	GCA_002397125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/125/GCA_002397125.1_ASM239712v1	28894102	-
Atopobiaceae bacterium UBA4973	1951464	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.11682	52.3	-	DGZT01	40	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455403	GCA_002397145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/145/GCA_002397145.1_ASM239714v1	28894102	-
Firmicutes bacterium UBA4975	1948025	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.52371	56.4	-	DGZR01	99	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455397	GCA_002397155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/155/GCA_002397155.1_ASM239715v1	28894102	-
Ruminococcaceae bacterium UBA4974	1952363	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.01652	45.1	-	DGZS01	70	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455398	GCA_002397165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/165/GCA_002397165.1_ASM239716v1	28894102	-
Ruminococcaceae bacterium UBA4972	1952362	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.89314	50.8	-	DGZU01	69	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455404	GCA_002397205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/205/GCA_002397205.1_ASM239720v1	28894102	-
Ruminococcaceae bacterium UBA4967	1952361	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.44441	51	-	DGZZ01	14	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450667	GCA_002397265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/265/GCA_002397265.1_ASM239726v1	28894102	-
Thermacetogenium sp. UBA4966	1947680	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.85469	50.2	-	DHAA01	157	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450666	GCA_002397275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/275/GCA_002397275.1_ASM239727v1	28894102	-
Comamonadaceae bacterium UBA4962	1951608	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	4.95343	69.3	-	DHAE01	30	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450662	GCA_002397315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/315/GCA_002397315.1_ASM239731v1	28894102	-
Clostridiales bacterium UBA4959	1950894	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.07135	49.3	-	DHAH01	176	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455148	GCA_002397345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/345/GCA_002397345.1_ASM239734v1	28894102	-
Ruminococcaceae bacterium UBA4958	1952359	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.73533	57	-	DHAI01	122	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455149	GCA_002397355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/355/GCA_002397355.1_ASM239735v1	28894102	-
Lachnospiraceae bacterium UBA4957	1952101	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.11322	41.9	-	DHAJ01	170	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455154	GCA_002397385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/385/GCA_002397385.1_ASM239738v1	28894102	-
Bacillales bacterium UBA4956	1950295	PRJNA348753	348753	Terrabacteria group	Firmicutes	0.768906	52.3	-	DHAK01	12	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456369	GCA_002397395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/395/GCA_002397395.1_ASM239739v1	28894102	-
Firmicutes bacterium UBA4953	1948023	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.54266	37.3	-	DHAN01	67	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455150	GCA_002397445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/445/GCA_002397445.1_ASM239744v1	28894102	-
Bacillales bacterium UBA4951	1950294	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.53564	48.4	-	DHAP01	54	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457562	GCA_002397465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/465/GCA_002397465.1_ASM239746v1	28894102	-
Acholeplasmataceae bacterium UBA4950	1951313	PRJNA348753	348753	Terrabacteria group	Tenericutes	1.28065	32.9	-	DHAQ01	12	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455153	GCA_002397505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/505/GCA_002397505.1_ASM239750v1	28894102	-
Ruminococcaceae bacterium UBA4949	1952358	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.04521	49.2	-	DHAR01	87	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450418	GCA_002397515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/515/GCA_002397515.1_ASM239751v1	28894102	-
Bacillales bacterium UBA4944	1950293	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.50231	36	-	DHAW01	61	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450423	GCA_002397545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/545/GCA_002397545.1_ASM239754v1	28894102	-
Ruminococcaceae bacterium UBA4945	1952356	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.4919	50.7	-	DHAV01	17	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450424	GCA_002397555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/555/GCA_002397555.1_ASM239755v1	28894102	-
bacterium UBA4943	1947806	PRJNA348753	348753	unclassified Bacteria	unclassified Bacteria (miscellaneous)	0.706842	32.7	-	DHAX01	71	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450422	GCA_002397585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/585/GCA_002397585.1_ASM239758v1	28894102	-
Clostridiales bacterium UBA4942	1950893	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.98426	44.6	-	DHAY01	115	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450421	GCA_002397605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/605/GCA_002397605.1_ASM239760v1	28894102	-
Bacillales bacterium UBA4940	1950292	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.92904	38	-	DHBA01	197	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450419	GCA_002397615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/615/GCA_002397615.1_ASM239761v1	28894102	-
Firmicutes bacterium UBA4939	1948022	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.51489	48.7	-	DHBB01	117	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454919	GCA_002397625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/625/GCA_002397625.1_ASM239762v1	28894102	-
Bacteroidales bacterium UBA4935	1950600	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.70891	37.6	-	DHBF01	46	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454915	GCA_002397685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/685/GCA_002397685.1_ASM239768v1	28894102	-
Ruminococcaceae bacterium UBA4937	1952355	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.78353	54.5	-	DHBD01	108	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454917	GCA_002397665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/665/GCA_002397665.1_ASM239766v1	28894102	-
Ruminococcaceae bacterium UBA4936	1952354	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.98913	35.9	-	DHBE01	129	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454918	GCA_002397705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/705/GCA_002397705.1_ASM239770v1	28894102	-
Ruminococcaceae bacterium UBA4933	1952353	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.97772	43.6	-	DHBH01	140	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454913	GCA_002397745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/745/GCA_002397745.1_ASM239774v1	28894102	-
Anaerolineaceae bacterium UBA4931	1951420	PRJNA348753	348753	Terrabacteria group	Chloroflexi	1.74224	47	-	DHBJ01	124	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454911	GCA_002397785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/785/GCA_002397785.1_ASM239778v1	28894102	-
Bacteroidales bacterium UBA4930	1950599	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.32554	30	-	DHBK01	115	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454912	GCA_002397795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/795/GCA_002397795.1_ASM239779v1	28894102	-
Anaerolineaceae bacterium UBA4929	1951419	PRJNA348753	348753	Terrabacteria group	Chloroflexi	2.10542	49.1	-	DHBL01	129	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457714	GCA_002397825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/825/GCA_002397825.1_ASM239782v1	28894102	-
Ruminococcaceae bacterium UBA4928	1952352	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.85522	48.5	-	DHBM01	91	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457713	GCA_002397835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/835/GCA_002397835.1_ASM239783v1	28894102	-
Atopobiaceae bacterium UBA4927	1951462	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.02986	51.7	-	DHBN01	31	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457716	GCA_002397865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/865/GCA_002397865.1_ASM239786v1	28894102	-
Ruminococcaceae bacterium UBA4925	1952351	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.77028	50.2	-	DHBP01	19	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457718	GCA_002397905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/905/GCA_002397905.1_ASM239790v1	28894102	-
Firmicutes bacterium UBA4924	1948020	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.52319	47.9	-	DHBQ01	169	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457717	GCA_002397915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/915/GCA_002397915.1_ASM239791v1	28894102	-
Synergistaceae bacterium UBA4921	1952910	PRJNA348753	348753	Synergistetes	Synergistia	1.83181	49.8	-	DHBT01	66	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457722	GCA_002397955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/955/GCA_002397955.1_ASM239795v1	28894102	-
Lachnospiraceae bacterium UBA4920	1952100	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.17498	42	-	DHBU01	207	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457721	GCA_002397985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/985/GCA_002397985.1_ASM239798v1	28894102	-
Anaerolineaceae bacterium UBA4918	1951418	PRJNA348753	348753	Terrabacteria group	Chloroflexi	1.97957	46.4	-	DHBW01	83	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454679	GCA_002398025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/025/GCA_002398025.1_ASM239802v1	28894102	-
Ruminococcaceae bacterium UBA4917	1952350	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.07977	44.4	-	DHBX01	121	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453002	GCA_002398045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/045/GCA_002398045.1_ASM239804v1	28894102	-
Firmicutes bacterium UBA4915	1948018	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.4852	47.8	-	DHBZ01	99	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454670	GCA_002398065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/065/GCA_002398065.1_ASM239806v1	28894102	-
Acholeplasmataceae bacterium UBA4904	1951312	PRJNA348753	348753	Terrabacteria group	Tenericutes	1.19007	32.5	-	DHCK01	52	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457454	GCA_002398145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/145/GCA_002398145.1_ASM239814v1	28894102	-
bacterium UBA4901	1947825	PRJNA348753	348753	unclassified Bacteria	unclassified Bacteria (miscellaneous)	2.17726	48.4	-	DHCN01	52	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457459	GCA_002398225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/225/GCA_002398225.1_ASM239822v1	28894102	-
Firmicutes bacterium UBA4898	1948016	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.42144	47	-	DHCQ01	83	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456296	GCA_002398265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/265/GCA_002398265.1_ASM239826v1	28894102	-
Bacillales bacterium UBA4895	1950291	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.98105	38.2	-	DHCT01	170	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456293	GCA_002398305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/305/GCA_002398305.1_ASM239830v1	28894102	-
Flavobacteriales bacterium UBA5011	1951026	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.19275	58.4	-	DGYH01	336	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455739	GCA_002398345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/345/GCA_002398345.1_ASM239834v1	28894102	-
Flammeovirgaceae bacterium UBA5008	1951785	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.97208	42	-	DGYK01	69	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450973	GCA_002398365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/365/GCA_002398365.1_ASM239836v1	28894102	-
Patescibacteria group bacterium UBA5006	1948822	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.780753	56	-	DGYM01	8	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453252	GCA_002398375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/375/GCA_002398375.1_ASM239837v1	28894102	-
Caulobacteraceae bacterium UBA5005	1951539	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.56137	65.7	-	DGYN01	152	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450986	GCA_002398405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/405/GCA_002398405.1_ASM239840v1	28894102	-
Cloacimonetes bacterium UBA4999	1947854	PRJNA348753	348753	FCB group	Candidatus Cloacimonetes	2.03392	45.6	-	DGYT01	149	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455632	GCA_002398435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/435/GCA_002398435.1_ASM239843v1	28894102	-
Acholeplasmataceae bacterium UBA5000	1951314	PRJNA348753	348753	Terrabacteria group	Tenericutes	1.13567	30.7	-	DGYS01	121	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450981	GCA_002398445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/445/GCA_002398445.1_ASM239844v1	28894102	-
Peptococcaceae bacterium UBA4997	1952710	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.71013	38.9	-	DGYV01	72	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455634	GCA_002398485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/485/GCA_002398485.1_ASM239848v1	28894102	-
Ruminococcaceae bacterium UBA4979	1952364	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.60145	46.1	-	DGZN01	45	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455405	GCA_002398525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/525/GCA_002398525.1_ASM239852v1	28894102	-
Firmicutes bacterium UBA4981	1948029	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.45767	48.6	-	DGZL01	169	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450885	GCA_002398515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/515/GCA_002398515.1_ASM239851v1	28894102	-
Firmicutes bacterium UBA4976	1948026	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.10126	41.1	-	DGZQ01	202	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455400	GCA_002398595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/595/GCA_002398595.1_ASM239859v1	28894102	-
Firmicutes bacterium UBA4971	1948024	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.35823	46.4	-	DGZV01	104	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455401	GCA_002398585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/585/GCA_002398585.1_ASM239858v1	28894102	-
Clostridiaceae bacterium UBA4969	1951579	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.12647	31.6	-	DGZX01	177	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450671	GCA_002398605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/605/GCA_002398605.1_ASM239860v1	28894102	-
Ruminococcaceae bacterium UBA4965	1952360	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.10034	58.7	-	DHAB01	96	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450669	GCA_002398645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/645/GCA_002398645.1_ASM239864v1	28894102	-
Atopobiaceae bacterium UBA4955	1951463	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.32215	54	-	DHAL01	40	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456370	GCA_002398695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/695/GCA_002398695.1_ASM239869v1	28894102	-
Ruminococcaceae bacterium UBA4947	1952357	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.65546	46.6	-	DHAT01	30	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450426	GCA_002398745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/745/GCA_002398745.1_ASM239874v1	28894102	-
Firmicutes bacterium UBA4938	1948021	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.59532	47.3	-	DHBC01	233	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454920	GCA_002398805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/805/GCA_002398805.1_ASM239880v1	28894102	-
Firmicutes bacterium UBA4916	1948019	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.69502	31.2	-	DHBY01	104	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453003	GCA_002398845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/845/GCA_002398845.1_ASM239884v1	28894102	-
Firmicutes bacterium UBA4914	1948017	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.02261	47.8	-	DHCA01	28	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454671	GCA_002398855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/855/GCA_002398855.1_ASM239885v1	28894102	-
Bacteroidales bacterium UBA4912	1950598	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.87468	37	-	DHCC01	95	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453017	GCA_002398875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/875/GCA_002398875.1_ASM239887v1	28894102	-
Ruminococcaceae bacterium UBA4910	1952349	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.55641	48.9	-	DHCE01	61	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453495	GCA_002398905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/905/GCA_002398905.1_ASM239890v1	28894102	-
Ruminococcaceae bacterium UBA4909	1952348	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.38856	59.2	-	DHCF01	110	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457465	GCA_002398925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/925/GCA_002398925.1_ASM239892v1	28894102	-
Clostridiaceae bacterium UBA4906	1951578	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.15831	31	-	DHCI01	188	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457456	GCA_002398945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/945/GCA_002398945.1_ASM239894v1	28894102	-
Ruminococcaceae bacterium UBA4905	1952347	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.47003	50.8	-	DHCJ01	15	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451809	GCA_002398955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/955/GCA_002398955.1_ASM239895v1	28894102	-
Ruminococcaceae bacterium UBA4899	1952346	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.00777	37.3	-	DHCP01	64	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456297	GCA_002398985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/985/GCA_002398985.1_ASM239898v1	28894102	-
Ruminococcaceae bacterium UBA4896	1952345	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.36505	49.2	-	DHCS01	93	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455965	GCA_002399005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/005/GCA_002399005.1_ASM239900v1	28894102	-
Bacteroidales bacterium UBA4893	1950597	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.32667	32.4	-	DHCV01	41	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456287	GCA_002399025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/025/GCA_002399025.1_ASM239902v1	28894102	-
Anaerolineaceae bacterium UBA4890	1951417	PRJNA348753	348753	Terrabacteria group	Chloroflexi	2.36905	49.9	-	DHCY01	44	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456288	GCA_002399085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/085/GCA_002399085.1_ASM239908v1	28894102	-
Firmicutes bacterium UBA4891	1948015	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.54843	48.8	-	DHCX01	116	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455964	GCA_002399065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/065/GCA_002399065.1_ASM239906v1	28894102	-
Cloacimonetes bacterium UBA4887	1947853	PRJNA348753	348753	FCB group	Candidatus Cloacimonetes	2.24958	47.1	-	DHDB01	81	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451264	GCA_002399155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/155/GCA_002399155.1_ASM239915v1	28894102	-
Ruminococcaceae bacterium UBA4885	1952344	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.49128	50.8	-	DHDD01	18	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452393	GCA_002399165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/165/GCA_002399165.1_ASM239916v1	28894102	-
Atopobiaceae bacterium UBA4884	1951461	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.24946	51.6	-	DHDE01	93	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451263	GCA_002399205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/205/GCA_002399205.1_ASM239920v1	28894102	-
bacterium UBA4883	1947805	PRJNA348753	348753	unclassified Bacteria	unclassified Bacteria (miscellaneous)	1.95868	50.3	-	DHDF01	156	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451268	GCA_002399225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/225/GCA_002399225.1_ASM239922v1	28894102	-
Firmicutes bacterium UBA4881	1948013	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.45974	37.7	-	DHDH01	51	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451266	GCA_002399235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/235/GCA_002399235.1_ASM239923v1	28894102	-
Firmicutes bacterium UBA4882	1948014	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.79409	49.4	-	DHDG01	71	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451269	GCA_002399265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/265/GCA_002399265.1_ASM239926v1	28894102	-
Thermoanaerobacterales bacterium UBA4880	1951294	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.97491	46.9	-	DHDI01	31	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455183	GCA_002399285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/285/GCA_002399285.1_ASM239928v1	28894102	-
Thermoanaerobacterales bacterium UBA4877	1951293	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.61606	41.1	-	DHDL01	36	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454293	GCA_002399345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/345/GCA_002399345.1_ASM239934v1	28894102	-
Ruminococcaceae bacterium UBA4876	1952343	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.65701	50.5	-	DHDM01	22	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454292	GCA_002399365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/365/GCA_002399365.1_ASM239936v1	28894102	-
Firmicutes bacterium UBA4874	1948012	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.56527	47.3	-	DHDO01	113	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456585	GCA_002399435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/435/GCA_002399435.1_ASM239943v1	28894102	-
Ruminococcaceae bacterium UBA4871	1952342	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.20037	45.2	-	DHDR01	34	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454296	GCA_002399445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/445/GCA_002399445.1_ASM239944v1	28894102	-
Clostridiaceae bacterium UBA4872	1951577	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.20785	31.3	-	DHDQ01	153	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454297	GCA_002399425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/425/GCA_002399425.1_ASM239942v1	28894102	-
Acholeplasmataceae bacterium UBA4870	1951311	PRJNA348753	348753	Terrabacteria group	Tenericutes	1.17805	31.2	-	DHDS01	112	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456589	GCA_002399485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/485/GCA_002399485.1_ASM239948v1	28894102	-
Bacillales bacterium UBA4869	1950290	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.75985	40	-	DHDT01	80	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452503	GCA_002399505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/505/GCA_002399505.1_ASM239950v1	28894102	-
bacterium UBA4868	1947804	PRJNA348753	348753	unclassified Bacteria	unclassified Bacteria (miscellaneous)	1.44091	59.2	-	DHDU01	166	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452504	GCA_002399535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/535/GCA_002399535.1_ASM239953v1	28894102	-
Firmicutes bacterium UBA4867	1948011	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.70302	33.1	-	DHDV01	194	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452505	GCA_002399525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/525/GCA_002399525.1_ASM239952v1	28894102	-
Bacteroidales bacterium UBA4866	1950596	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.11309	31	-	DHDW01	54	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453488	GCA_002399565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/565/GCA_002399565.1_ASM239956v1	28894102	-
Bacteroidales bacterium UBA4865	1950595	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.42742	30.4	-	DHDX01	74	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452507	GCA_002399585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/585/GCA_002399585.1_ASM239958v1	28894102	-
Anaerolineaceae bacterium UBA4864	1951416	PRJNA348753	348753	Terrabacteria group	Chloroflexi	2.16904	49.2	-	DHDY01	135	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452508	GCA_002399605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/605/GCA_002399605.1_ASM239960v1	28894102	-
Firmicutes bacterium UBA4862	1948010	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.58014	49	-	DHEA01	96	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452510	GCA_002399645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/645/GCA_002399645.1_ASM239964v1	28894102	-
Cloacimonetes bacterium UBA4860	1947852	PRJNA348753	348753	FCB group	Candidatus Cloacimonetes	2.35852	46.9	-	DHEC01	78	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452512	GCA_002399685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/685/GCA_002399685.1_ASM239968v1	28894102	-
Ruminococcaceae bacterium UBA4859	1952341	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.5352	50.8	-	DHED01	18	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453590	GCA_002399705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/705/GCA_002399705.1_ASM239970v1	28894102	-
Chitinophagaceae bacterium UBA4857	1951561	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.81526	37.9	-	DHEF01	56	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453582	GCA_002399735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/735/GCA_002399735.1_ASM239973v1	28894102	-
Bacillales bacterium UBA4856	1950289	PRJNA348753	348753	Terrabacteria group	Firmicutes	0.831484	51.1	-	DHEG01	16	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453581	GCA_002399765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/765/GCA_002399765.1_ASM239976v1	28894102	-
Bacillales bacterium UBA4855	1950288	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.30348	30.2	-	DHEH01	17	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453584	GCA_002399785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/785/GCA_002399785.1_ASM239978v1	28894102	-
Acholeplasmataceae bacterium UBA4853	1951310	PRJNA348753	348753	Terrabacteria group	Tenericutes	1.44715	30.3	-	DHEJ01	43	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453586	GCA_002399815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/815/GCA_002399815.1_ASM239981v1	28894102	-
Atopobiaceae bacterium UBA4852	1951460	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.48896	53.8	-	DHEK01	84	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453585	GCA_002399855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/855/GCA_002399855.1_ASM239985v1	28894102	-
Cloacimonetes bacterium UBA4849	1947851	PRJNA348753	348753	FCB group	Candidatus Cloacimonetes	2.23028	47.7	-	DHEN01	64	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452750	GCA_002399895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/895/GCA_002399895.1_ASM239989v1	28894102	-
Bacteroidales bacterium UBA4850	1950594	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.57937	44.4	-	DHEM01	69	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453587	GCA_002399885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/885/GCA_002399885.1_ASM239988v1	28894102	-
Ruminococcaceae bacterium UBA4848	1952340	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.20141	62.6	-	DHEO01	117	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452751	GCA_002399925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/925/GCA_002399925.1_ASM239992v1	28894102	-
Ruminococcaceae bacterium UBA4847	1952339	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.1169	51.7	-	DHEP01	107	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452758	GCA_002399935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/935/GCA_002399935.1_ASM239993v1	28894102	-
Firmicutes bacterium UBA4845	1948009	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.11525	35.3	-	DHER01	155	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452756	GCA_002399975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/975/GCA_002399975.1_ASM239997v1	28894102	-
Ruminococcaceae bacterium UBA4843	1952338	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.95304	49.1	-	DHET01	95	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452754	GCA_002400015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/015/GCA_002400015.1_ASM240001v1	28894102	-
Anaerolineaceae bacterium UBA4841	1951415	PRJNA348753	348753	Terrabacteria group	Chloroflexi	2.15905	49.6	-	DHEV01	131	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452752	GCA_002400055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/055/GCA_002400055.1_ASM240005v1	28894102	-
Clostridiaceae bacterium UBA4839	1951576	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.38323	32.3	-	DHEX01	153	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453841	GCA_002400085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/085/GCA_002400085.1_ASM240008v1	28894102	-
Ruminococcaceae bacterium UBA4838	1952337	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.48986	50.9	-	DHEY01	24	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453840	GCA_002400125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/125/GCA_002400125.1_ASM240012v1	28894102	-
Bacillales bacterium UBA4837	1950287	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.51652	35.6	-	DHEZ01	101	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453839	GCA_002400145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/145/GCA_002400145.1_ASM240014v1	28894102	-
bacterium UBA4835	1947803	PRJNA348753	348753	unclassified Bacteria	unclassified Bacteria (miscellaneous)	1.73286	45.6	-	DHFB01	110	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453837	GCA_002400175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/175/GCA_002400175.1_ASM240017v1	28894102	-
Firmicutes bacterium UBA4836	1948008	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.72369	48.3	-	DHFA01	125	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453838	GCA_002400165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/165/GCA_002400165.1_ASM240016v1	28894102	-
Atopobiaceae bacterium UBA4833	1951459	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.16325	53.1	-	DHFD01	45	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453835	GCA_002400225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/225/GCA_002400225.1_ASM240022v1	28894102	-
Ruminococcaceae bacterium UBA4832	1952336	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.43947	45.8	-	DHFE01	35	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453834	GCA_002400245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/245/GCA_002400245.1_ASM240024v1	28894102	-
Ruminococcaceae bacterium UBA4831	1952335	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.61274	47.2	-	DHFF01	157	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453833	GCA_002400265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/265/GCA_002400265.1_ASM240026v1	28894102	-
Ruminococcaceae bacterium UBA4830	1952334	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.73833	50.8	-	DHFG01	63	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453832	GCA_002400275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/275/GCA_002400275.1_ASM240027v1	28894102	-
Clostridiaceae bacterium UBA4828	1951575	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.23136	31.3	-	DHFI01	150	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453062	GCA_002400325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/325/GCA_002400325.1_ASM240032v1	28894102	-
Ruminococcaceae bacterium UBA4827	1952333	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.48681	50.8	-	DHFJ01	14	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453057	GCA_002400345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/345/GCA_002400345.1_ASM240034v1	28894102	-
Elusimicrobia bacterium UBA4825	1947922	PRJNA348753	348753	Elusimicrobia	unclassified Elusimicrobia	2.18402	37.2	-	DHFL01	92	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453059	GCA_002400355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/355/GCA_002400355.1_ASM240035v1	28894102	-
Anaerolineales bacterium UBA4826	1950211	PRJNA348753	348753	Terrabacteria group	Chloroflexi	4.40008	59.9	-	DHFK01	244	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453058	GCA_002400365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/365/GCA_002400365.1_ASM240036v1	28894102	-
Candidatus Moranbacteria bacterium UBA4824	1953301	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.979487	35.4	-	DHFM01	77	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453060	GCA_002400405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/405/GCA_002400405.1_ASM240040v1	28894102	-
Chitinophagaceae bacterium UBA4411	1951558	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.4374	43.3	-	DGQP01	16	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456930	GCA_002400415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/415/GCA_002400415.1_ASM240041v1	28894102	-
Competibacteraceae bacterium UBA4410	1951622	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.29734	57.8	-	DGQQ01	159	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456929	GCA_002400455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/455/GCA_002400455.1_ASM240045v1	28894102	-
Chitinophagaceae bacterium UBA4412	1951559	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.04538	42.7	-	DGQO01	295	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456927	GCA_002400445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/445/GCA_002400445.1_ASM240044v1	28894102	-
Alphaproteobacteria bacterium	1913988	PRJNA391950	391950	Proteobacteria	Alphaproteobacteria	1.62336	44.5	-	NVQL01	47	1645	1605	9/28/17	9/28/17	Contig	University of Southern California	SAMN07569008	GCA_002400495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/495/GCA_002400495.1_ASM240049v1	-	-
Clostridiales bacterium UBA1342	1950816	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.53662	37	-	DBSM01	69	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06457137	GCA_002306535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/535/GCA_002306535.1_ASM230653v1	28894102	-
Epsilonproteobacteria bacterium UBA1340	1948567	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.5241	33.3	-	DBSO01	23	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06457135	GCA_002306555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/555/GCA_002306555.1_ASM230655v1	28894102	-
Clostridiales bacterium UBA1341	1950815	PRJNA348753	348753	Terrabacteria group	Firmicutes	4.13867	36.1	-	DBSN01	147	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06457134	GCA_002306565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/565/GCA_002306565.1_ASM230656v1	28894102	-
Flavobacteriales bacterium UBA1339	1950951	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.40873	43.5	-	DBSP01	287	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06453180	GCA_002306585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/585/GCA_002306585.1_ASM230658v1	28894102	-
Planctomycetaceae bacterium UBA1338	1952728	PRJNA348753	348753	PVC group	Planctomycetes	3.25423	51.2	-	DBSQ01	313	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06453179	GCA_002306615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/615/GCA_002306615.1_ASM230661v1	28894102	-
Verrucomicrobia bacterium UBA1337	1948236	PRJNA348753	348753	PVC group	Verrucomicrobia	3.25835	55.7	-	DBSR01	265	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452976	GCA_002306635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/635/GCA_002306635.1_ASM230663v1	28894102	-
Flavobacteriales bacterium UBA1336	1950950	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	0.89735	35.5	-	DBSS01	122	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06453177	GCA_002306655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/655/GCA_002306655.1_ASM230665v1	28894102	-
Alteromonadaceae bacterium UBA1334	1951382	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.65734	49.2	-	DBSU01	159	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06453175	GCA_002306695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/695/GCA_002306695.1_ASM230669v1	28894102	-
Opitutae bacterium UBA1333	1948706	PRJNA348753	348753	PVC group	Verrucomicrobia	3.56843	55.3	-	DBSV01	136	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06453174	GCA_002306715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/715/GCA_002306715.1_ASM230671v1	28894102	-
Bacteriovoracaceae bacterium UBA1331	1961476	PRJNA348753	348753	Proteobacteria	Oligoflexia	3.08946	38.9	-	DBSX01	206	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06453172	GCA_002306735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/735/GCA_002306735.1_ASM230673v1	28894102	-
Dehalococcoidia bacterium UBA1332	1948476	PRJNA348753	348753	Terrabacteria group	Chloroflexi	2.05581	44.3	-	DBSW01	217	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06453173	GCA_002306745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/745/GCA_002306745.1_ASM230674v1	28894102	-
Alphaproteobacteria bacterium UBA1330	1948360	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.89797	57.1	-	DBSY01	275	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06453171	GCA_002306775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/775/GCA_002306775.1_ASM230677v1	28894102	-
Dehalococcoidia bacterium UBA1328	1948475	PRJNA348753	348753	Terrabacteria group	Chloroflexi	2.06571	51.1	-	DBTA01	64	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06453720	GCA_002306815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/815/GCA_002306815.1_ASM230681v1	28894102	-
Dehalococcoidia bacterium UBA1327	1948474	PRJNA348753	348753	Terrabacteria group	Chloroflexi	1.17853	41.6	-	DBTB01	58	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06453715	GCA_002306835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/835/GCA_002306835.1_ASM230683v1	28894102	-
Alphaproteobacteria bacterium UBA1326	1948359	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.08123	50.2	-	DBTC01	41	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06453716	GCA_002306855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/855/GCA_002306855.1_ASM230685v1	28894102	-
Alphaproteobacteria bacterium UBA1324	1948358	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.53398	50.8	-	DBTE01	27	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06453718	GCA_002306905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/905/GCA_002306905.1_ASM230690v1	28894102	-
Methylacidiphilaceae bacterium UBA1321	1952216	PRJNA348753	348753	PVC group	Verrucomicrobia	3.73195	54.9	-	DBTH01	348	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06453713	GCA_002306945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/945/GCA_002306945.1_ASM230694v1	28894102	-
Ruminococcaceae bacterium UBA1320	1952279	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.37025	43.7	-	DBTI01	311	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06453714	GCA_002306975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/975/GCA_002306975.1_ASM230697v1	28894102	-
Verrucomicrobia bacterium UBA1319	1948235	PRJNA348753	348753	PVC group	Verrucomicrobia	5.37158	56.7	-	DBTJ01	221	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06454810	GCA_002306985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/985/GCA_002306985.1_ASM230698v1	28894102	-
Spirochaetaceae bacterium UBA1318	1952885	PRJNA348753	348753	Spirochaetes	Spirochaetia	4.53599	60.4	-	DBTK01	150	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06451415	GCA_002307015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/015/GCA_002307015.1_ASM230701v1	28894102	-
Akkermansiaceae bacterium UBA1315	1951350	PRJNA348753	348753	PVC group	Verrucomicrobia	3.09047	55	-	DBTN01	50	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06454786	GCA_002307065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/065/GCA_002307065.1_ASM230706v1	28894102	-
Clostridiales bacterium UBA1316	1950814	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.82511	48.5	-	DBTM01	94	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06454774	GCA_002307055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/055/GCA_002307055.1_ASM230705v1	28894102	-
Bacteroidetes bacterium UBA1312	1953138	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.40241	37.6	-	DBTQ01	41	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06451419	GCA_002307135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/135/GCA_002307135.1_ASM230713v1	28894102	-
Rhodocyclaceae bacterium UBA1310	1952835	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	5.49153	57.9	-	DBTS01	161	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06454772	GCA_002307175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/175/GCA_002307175.1_ASM230717v1	28894102	-
Bacteroidales bacterium UBA1309	1950405	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.58469	42.5	-	DBTT01	55	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06453952	GCA_002307185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/185/GCA_002307185.1_ASM230718v1	28894102	-
Acidobacteriaceae bacterium UBA1307	1951344	PRJNA348753	348753	Acidobacteria	Acidobacteriia	3.30933	60.6	-	DBTV01	52	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06453958	GCA_002307235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/235/GCA_002307235.1_ASM230723v1	28894102	-
Spirochaetaceae bacterium UBA1306	1952884	PRJNA348753	348753	Spirochaetes	Spirochaetia	4.10335	63.9	-	DBTW01	222	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06451774	GCA_002307245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/245/GCA_002307245.1_ASM230724v1	28894102	-
Ignavibacteriales bacterium UBA1304	1951141	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.1726	36.9	-	DBTY01	59	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06453957	GCA_002307295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/295/GCA_002307295.1_ASM230729v1	28894102	-
Alphaproteobacteria bacterium UBA1303	1948357	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.83003	60.1	-	DBTZ01	70	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06451777	GCA_002307315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/315/GCA_002307315.1_ASM230731v1	28894102	-
Oceanicella actignis	1189325	PRJEB18422	355820	Proteobacteria	Alphaproteobacteria	3.34493	72.2	-	FRDL01	34	3049	2926	12/3/16	9/19/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216200	GCA_900143155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/155/GCA_900143155.1_IMG-taxon_2663762749_annotated_assembly	-	CGMCC 1.10808
Ruminococcaceae bacterium UBA642	1952416	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.91369	39.2	-	DBOQ01	130	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457570	GCA_002299305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/305/GCA_002299305.1_ASM229930v1	28894102	-
Methylococcaceae bacterium UBA662	1952227	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.40187	52.7	-	DBNW01	87	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457812	GCA_002299425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/425/GCA_002299425.1_ASM229942v1	28894102	-
Acidimicrobiaceae bacterium UBA668	1951340	PRJNA348753	348753	Terrabacteria group	Actinobacteria	3.34874	68.3	-	DBNQ01	357	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457808	GCA_002299395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/395/GCA_002299395.1_ASM229939v1	28894102	-
Patescibacteria group bacterium UBA661	1948859	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.827545	44.9	-	DBNX01	34	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457811	GCA_002299465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/465/GCA_002299465.1_ASM229946v1	28894102	-
Bacillales bacterium UBA660	1950333	PRJNA348753	348753	Terrabacteria group	Firmicutes	0.891708	27.8	-	DBNY01	59	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457810	GCA_002299475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/475/GCA_002299475.1_ASM229947v1	28894102	-
Methylococcaceae bacterium UBA659	1952226	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.2223	49.5	-	DBNZ01	240	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06454997	GCA_002299495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/495/GCA_002299495.1_ASM229949v1	28894102	-
Candidatus Aminicenantes bacterium UBA647	1953198	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	2.65605	37.6	-	DBOL01	115	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457567	GCA_002299555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/555/GCA_002299555.1_ASM229955v1	28894102	-
Enterobacteriaceae bacterium UBA648	1951710	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.95062	57.1	-	DBOK01	191	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457564	GCA_002299595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/595/GCA_002299595.1_ASM229959v1	28894102	-
Clostridiales bacterium UBA643	1951596	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.47386	50.4	-	DBOP01	172	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457571	GCA_002299625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/625/GCA_002299625.1_ASM229962v1	28894102	-
Lachnospiraceae bacterium UBA638	1952109	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.66018	38	-	DBOU01	262	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455714	GCA_002299665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/665/GCA_002299665.1_ASM229966v1	28894102	-
Xanthomonadaceae bacterium NML93-0399	2032565	PRJNA400624	400624	Proteobacteria	Gammaproteobacteria	3.56544	68.3	-	NTJI01	7	3245	3124	9/16/17	9/19/17	Contig	National Microbiology Laboratory/ Public Health Agency of Canada	SAMN07572152	GCA_002307375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/375/GCA_002307375.1_ASM230737v1	-	NML93-0399
Pseudoalteromonas amylolytica	1859457	PRJNA336466	336466	Proteobacteria	Gammaproteobacteria	4.85639	43.3	-	MKJU01	38	4222	4048	10/26/16	4/13/17	Scaffold	"Second Institute of Oceanography, State Oceanic Administration"	SAMN05511238	GCA_001854605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/605/GCA_001854605.1_ASM185460v1	-	JW1
Klebsiella pneumoniae	573	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	5.70839	57.1358	chromosome:NZ_CP020108.1/CP020108.1; plasmid tig00000001:NZ_CP020109.1/CP020109.1; plasmid tig00000002:NZ_CP020110.1/CP020110.1; plasmid tig00000003:NZ_CP020111.1/CP020111.1; plasmid tig00000004:NZ_CP020112.1/CP020112.1	-	5	5841	5573	3/21/17	3/23/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014939	GCA_002056475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/475/GCA_002056475.1_ASM205647v1	-	AR_0098
Williamwhitmania taraxaci	1640674	PRJEB15405	343096	FCB group	Bacteroidetes/Chlorobi group	4.15449	42.7	-	FMYP01	185	3562	3358	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216323	GCA_900096565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/096/565/GCA_900096565.1_IMG-taxon_2654588148_annotated_assembly	-	A7P-90m
Izhakiella australiensis	1926881	PRJNA356803	356803	Proteobacteria	Gammaproteobacteria	5.01543	54	-	MRUL01	61	4840	4611	2/27/17	3/2/17	Scaffold	the University of NSW	SAMN06127491	GCA_002006995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/995/GCA_002006995.1_ASM200699v1	-	D4N98
Photobacterium toruni	1935446	PRJEB19054	379566	Proteobacteria	Gammaproteobacteria	4.42095	38.6	-	FUWP01	118	4068	3836	3/17/17	3/24/17	Scaffold	UVEG	SAMEA93355918	GCA_900166975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/975/GCA_900166975.1_P.torugnensis_CECT9189T_SPAdes_Prokka_EMBL.gz	-	CECT 9189
Neisseria dumasiana	1931275	PRJNA359492	359492	Proteobacteria	Betaproteobacteria	2.63995	50.5	-	MTAC01	124	2490	2326	4/24/17	4/26/17	Contig	Wadsworth Center / NYSDOH	SAMN06192246	GCA_002108505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/505/GCA_002108505.1_ASM210850v1	-	93087
Bacillus solisilvae	1516104	PRJNA384678	384678	Terrabacteria group	Firmicutes	4.37733	33	-	NETJ01	20	4353	4223	5/11/17	6/15/17	Contig	Northeast Agricultural University	SAMN06849078	GCA_002128405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/405/GCA_002128405.1_ASM212840v1	-	NEAU-cbsb5
Klebsiella pneumoniae	573	PRJNA279650	279650	Proteobacteria	Gammaproteobacteria	5.56659	57.1357	chromosome:NZ_CP014755.1/CP014755.1; plasmid pKPN-041:NZ_CP014758.1/CP014758.1; plasmid pKPN-04f:NZ_CP014756.1/CP014756.1; plasmid pNDM-1fa:NZ_CP014757.1/CP014757.1	-	4	5503	5269	5/19/16	2/25/17	Complete Genome	NHGRI	SAMN03455970	GCA_001648215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/215/GCA_001648215.1_ASM164821v1	-	AATZP
Bordetella genomosp. 1	1395607	PRJNA385118	385118	Proteobacteria	Betaproteobacteria	5.59647	68.7	-	NEVL01	7	5120	4968	8/21/17	8/23/17	Contig	University of Michigan	SAMN06767140	GCA_002261335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/335/GCA_002261335.1_ASM226133v1	-	AU17610
Klebsiella pneumoniae UHKPC33	1284802	PRJNA187294	187294	Proteobacteria	Gammaproteobacteria	5.66312	57.1333	chromosome:NZ_CP011989.1/CP011989.1; plasmid pUHKPC33-113.638kb:NZ_CP011991.1/CP011991.1; plasmid pUHKPC33-13.841kb:NZ_CP011993.1/CP011993.1; plasmid pUHKPC33-162.533kb:NZ_CP011990.1/CP011990.1; plasmid pUHKPC33-43.380kb:NZ_CP011992.1/CP011992.1	-	5	5782	5506	7/23/15	2/21/17	Complete Genome	JCVI	SAMN02142014	GCA_000417085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/085/GCA_000417085.2_ASM41708v2	24913165	UHKPC33
Brucella vulpis	981386	PRJEB12176	307451	Proteobacteria	Alphaproteobacteria	3.23814	57.1328	chromosome 1:NZ_LN997863.1/LN997863.1; chromosome 2:NZ_LN997864.1/LN997864.1	-	2	3350	2860	1/6/16	4/10/17	Complete Genome	JLU	SAMEA3715143	GCA_900000005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/000/005/GCA_900000005.1_BVF60	-	F60
Klebsiella pneumoniae	573	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	5.66611	57.1255	chromosome:NZ_CP020071.1/CP020071.1; plasmid tig00000002:NZ_CP020072.1/CP020072.1; plasmid tig00000003:NZ_CP020073.1/CP020073.1; plasmid tig00000004:NZ_CP020074.1/CP020074.1; plasmid tig00000005:NZ_CP020075.1/CP020075.1	-	5	5787	5533	3/21/17	3/23/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014956	GCA_002056385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/385/GCA_002056385.1_ASM205638v1	-	AR_0115
Lonsdalea populi	1172565	PRJNA306788	306788	Proteobacteria	Gammaproteobacteria	3.7869	55.4	-	LUTD01	90	3408	3163	4/27/17	5/3/17	Contig	Research Institute of Forest Ecology Environment and  Protection	SAMN04363454	GCA_002111545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/545/GCA_002111545.1_ASM211154v1	-	CFCC 11768
Lonsdalea iberica	1082703	PRJNA306788	306788	Proteobacteria	Gammaproteobacteria	3.78182	55	-	LUTP01	133	3382	3077	4/27/17	8/4/17	Contig	Research Institute of Forest Ecology Environment and  Protection	SAMN04363720	GCA_002111585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/585/GCA_002111585.1_ASM211158v1	-	LMG 26264
Rhizobiales bacterium	1909294	PRJNA391950	391950	Proteobacteria	Alphaproteobacteria	1.80346	49.4	-	NVQN01	114	1784	1585	9/28/17	9/28/17	Contig	University of Southern California	SAMN07569006	GCA_002400485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/485/GCA_002400485.1_ASM240048v1	-	-
Flavobacteriaceae bacterium	1871037	PRJNA391950	391950	FCB group	Bacteroidetes/Chlorobi group	1.55221	32.2	-	NVQO01	181	1456	1380	9/28/17	9/28/17	Contig	University of Southern California	SAMN07569005	GCA_002400505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/505/GCA_002400505.1_ASM240050v1	-	-
Verrucomicrobiales bacterium	2026801	PRJNA391950	391950	PVC group	Verrucomicrobia	1.67087	58.2	-	NVQP01	185	1487	1328	9/28/17	9/28/17	Contig	University of Southern California	SAMN07569004	GCA_002400515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/515/GCA_002400515.1_ASM240051v1	-	-
Cellvibrionales bacterium	2026722	PRJNA391950	391950	Proteobacteria	Gammaproteobacteria	1.67327	48	-	NVQQ01	107	1648	1537	9/28/17	9/28/17	Contig	University of Southern California	SAMN07569003	GCA_002400565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/565/GCA_002400565.1_ASM240056v1	-	-
Pelagibacteraceae bacterium	2026775	PRJNA391950	391950	Proteobacteria	Alphaproteobacteria	0.848811	30.7	-	NVQS01	70	941	860	9/28/17	9/28/17	Contig	University of Southern California	SAMN07569001	GCA_002400595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/595/GCA_002400595.1_ASM240059v1	-	-
SAR86 cluster bacterium	2030880	PRJNA391950	391950	Proteobacteria	Gammaproteobacteria	1.8346	45.9	-	NVQR01	170	1742	1698	9/28/17	9/28/17	Contig	University of Southern California	SAMN07569002	GCA_002400575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/575/GCA_002400575.1_ASM240057v1	-	-
Legionellales bacterium	2026754	PRJNA391950	391950	Proteobacteria	Gammaproteobacteria	1.02082	38	-	NVQV01	101	1041	968	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568998	GCA_002400645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/645/GCA_002400645.1_ASM240064v1	-	-
Burkholderiaceae bacterium	2030806	PRJNA391950	391950	Proteobacteria	Betaproteobacteria	2.6511	63.1	-	NVQW01	165	2570	2458	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568997	GCA_002400655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/655/GCA_002400655.1_ASM240065v1	-	-
Candidatus Marinimicrobia bacterium	2026760	PRJNA391950	391950	FCB group	Candidatus Marinimicrobia	0.856674	36.8	-	NVQZ01	118	934	835	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568994	GCA_002400685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/685/GCA_002400685.1_ASM240068v1	-	-
Gammaproteobacteria bacterium	1913989	PRJNA391950	391950	Proteobacteria	Gammaproteobacteria	1.98173	45.4	-	NVRB01	53	1985	1855	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568992	GCA_002400725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/725/GCA_002400725.1_ASM240072v1	-	-
Rhodobacteraceae bacterium	1904441	PRJNA391950	391950	Proteobacteria	Alphaproteobacteria	2.88482	59.3	-	NVQY01	251	2953	2836	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568995	GCA_002400675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/675/GCA_002400675.1_ASM240067v1	-	-
Erythrobacteraceae bacterium	2026738	PRJNA391950	391950	Proteobacteria	Alphaproteobacteria	1.78558	63.4	-	NVRD01	106	1800	1615	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568990	GCA_002400745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/745/GCA_002400745.1_ASM240074v1	-	-
Bacteroidales bacterium	2030927	PRJNA391950	391950	FCB group	Bacteroidetes/Chlorobi group	3.2077	35	-	NVRE01	93	2543	2434	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568989	GCA_002400765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/765/GCA_002400765.1_ASM240076v1	-	-
Rhodospirillaceae bacterium	1898112	PRJNA391950	391950	Proteobacteria	Alphaproteobacteria	3.03105	48.9	-	NVTL01	113	2924	2772	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568930	GCA_002401565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/565/GCA_002401565.1_ASM240156v1	-	-
Lonsdalea britannica	1082704	PRJNA306788	306788	Proteobacteria	Gammaproteobacteria	3.88208	55.1	-	LUTN01	57	3540	2926	4/27/17	8/4/17	Contig	Research Institute of Forest Ecology Environment and  Protection	SAMN04363613	GCA_002111595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/595/GCA_002111595.1_ASM211159v1	-	LMG 26267
Bacteroidetes bacterium	1898104	PRJNA391950	391950	FCB group	Bacteroidetes/Chlorobi group	2.67402	35.6	-	NVRJ01	148	2143	2082	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568984	GCA_002400835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/835/GCA_002400835.1_ASM240083v1	-	-
Planctomycetes bacterium	2026780	PRJNA391950	391950	PVC group	Planctomycetes	1.50962	55.1	-	NVRO01	246	1488	1437	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568979	GCA_002400895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/895/GCA_002400895.1_ASM240089v1	-	-
Piscirickettsiaceae bacterium	2030828	PRJNA391950	391950	Proteobacteria	Gammaproteobacteria	1.50444	43.4	-	NVRV01	76	1598	1553	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568972	GCA_002400965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/965/GCA_002400965.1_ASM240096v1	-	-
Candidatus Wolfebacteria bacterium	2030812	PRJNA391950	391950	unclassified Bacteria	Bacteria candidate phyla	0.650374	39.4	-	NVRX01	9	750	697	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568970	GCA_002400985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/985/GCA_002400985.1_ASM240098v1	-	-
Flavobacteriales bacterium	2021391	PRJNA391950	391950	FCB group	Bacteroidetes/Chlorobi group	2.95346	42.6	-	NVRW01	103	2290	2058	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568971	GCA_002400975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/975/GCA_002400975.1_ASM240097v1	-	-
Dehalococcoidia bacterium	2026734	PRJNA391950	391950	Terrabacteria group	Chloroflexi	1.84522	55.3	-	NVRY01	215	1916	1820	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568969	GCA_002401025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/025/GCA_002401025.1_ASM240102v1	-	-
Candidatus Kaiserbacteria bacterium	2030810	PRJNA391950	391950	unclassified Bacteria	Bacteria candidate phyla	0.52032	40.8	-	NVSE01	32	603	550	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568963	GCA_002401125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/125/GCA_002401125.1_ASM240112v1	-	-
Zetaproteobacteria bacterium	2026807	PRJNA391950	391950	Proteobacteria	Zetaproteobacteria	1.22228	43.2	-	NVSF01	92	1318	1167	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568962	GCA_002401135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/135/GCA_002401135.1_ASM240113v1	-	-
bacterium	1869227	PRJNA391950	391950	unclassified Bacteria	unclassified Bacteria (miscellaneous)	2.59437	52.5	-	NVSM01	77	2298	2079	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568955	GCA_002401225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/225/GCA_002401225.1_ASM240122v1	-	-
Thiotrichales bacterium	2026796	PRJNA391950	391950	Proteobacteria	Gammaproteobacteria	2.81016	48.1	-	NVSN01	61	2669	2368	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568954	GCA_002401265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/265/GCA_002401265.1_ASM240126v1	-	-
Rhodobiaceae bacterium	2026785	PRJNA391950	391950	Proteobacteria	Alphaproteobacteria	3.28228	51.8	-	NVSO01	48	3104	2955	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568953	GCA_002401305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/305/GCA_002401305.1_ASM240130v1	-	-
SAR202 cluster bacterium	2030829	PRJNA391950	391950	Terrabacteria group	Chloroflexi	3.09603	56.8	-	NVSQ01	114	2983	2750	9/28/17	9/28/17	Scaffold	University of Southern California	SAMN07568951	GCA_002401285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/285/GCA_002401285.1_ASM240128v1	-	-
SAR324 cluster bacterium	2024889	PRJNA391950	391950	Proteobacteria	delta/epsilon subdivisions	3.07514	41.7	-	NVSR01	182	2807	2713	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568950	GCA_002401295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/295/GCA_002401295.1_ASM240129v1	-	-
Candidatus Peregrinibacteria bacterium	2030811	PRJNA391950	391950	unclassified Bacteria	Bacteria candidate phyla	1.33817	34.6	-	NVTB01	16	1267	1142	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568940	GCA_002401425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/425/GCA_002401425.1_ASM240142v1	-	-
Elusimicrobia bacterium	2030800	PRJNA391950	391950	Elusimicrobia	unclassified Elusimicrobia	2.91323	54.9	-	NVTF01	191	2720	2645	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568936	GCA_002401485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/485/GCA_002401485.1_ASM240148v1	-	-
Moraxellaceae bacterium	1889775	PRJNA391950	391950	Proteobacteria	Gammaproteobacteria	3.37009	45.3	-	NVTH01	250	2916	2808	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568934	GCA_002401525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/525/GCA_002401525.1_ASM240152v1	-	-
Proteobacteria bacterium	1977087	PRJNA391950	391950	Proteobacteria	unclassified Proteobacteria	2.10502	42.9	-	NVTQ01	128	2187	2076	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568925	GCA_002401635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/635/GCA_002401635.1_ASM240163v1	-	-
Kordiimonadales bacterium	2030814	PRJNA391950	391950	Proteobacteria	Alphaproteobacteria	2.68449	50.7	-	NVTU01	63	2521	2470	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568921	GCA_002401685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/685/GCA_002401685.1_ASM240168v1	-	-
Methylophilaceae bacterium	2030816	PRJNA391950	391950	Proteobacteria	Betaproteobacteria	1.67646	42.3	-	NVTX01	137	1779	1642	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568918	GCA_002401735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/735/GCA_002401735.1_ASM240173v1	-	-
Thiotrichaceae bacterium	2030882	PRJNA391950	391950	Proteobacteria	Gammaproteobacteria	4.32351	47.9	-	NVTY01	67	4050	3842	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568917	GCA_002401765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/765/GCA_002401765.1_ASM240176v1	-	-
Candidatus Dependentiae bacterium	2030827	PRJNA391950	391950	unclassified Bacteria	Bacteria candidate phyla	1.10861	34.6	-	NVUD01	19	993	857	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568912	GCA_002401785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/785/GCA_002401785.1_ASM240178v1	-	-
Ectothiorhodospiraceae bacterium	2026737	PRJNA391950	391950	Proteobacteria	Gammaproteobacteria	6.78703	46.7	-	NVUB01	242	6073	5603	9/28/17	9/28/17	Scaffold	University of Southern California	SAMN07568914	GCA_002401775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/775/GCA_002401775.1_ASM240177v1	-	-
Candidatus Aerophobetes bacterium	2030807	PRJNA391950	391950	unclassified Bacteria	Bacteria candidate phyla	1.31588	38.8	-	NVUK01	63	1257	1213	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568905	GCA_002401865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/865/GCA_002401865.1_ASM240186v1	-	-
OCS116 cluster bacterium	2030921	PRJNA391950	391950	Proteobacteria	Alphaproteobacteria	3.60139	44.7	-	NVUS01	45	3523	3404	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568897	GCA_002402005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/402/005/GCA_002402005.1_ASM240200v1	-	-
Candidatus Cloacimonetes bacterium	2030808	PRJNA391950	391950	FCB group	Candidatus Cloacimonetes	4.6284	29.9	-	NVVD01	56	3726	3615	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568886	GCA_002402105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/402/105/GCA_002402105.1_ASM240210v1	-	-
Rickettsiales bacterium	2026788	PRJNA391950	391950	Proteobacteria	Alphaproteobacteria	1.90552	40.6	-	NVVL01	111	1860	1805	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568878	GCA_002402195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/402/195/GCA_002402195.1_ASM240219v1	-	-
bacterium UBP9_UBA4705	1953450	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	2.42146	43.5	-	DHKB01	71	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456592	GCA_002407045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/407/045/GCA_002407045.1_ASM240704v1	28894102	-
Sodalis praecaptivus	1239307	PRJNA199998	199998	Proteobacteria	Gammaproteobacteria	5.15942	57.125	chromosome:NZ_CP006569.1/CP006569.1; plasmid pHS1:NZ_CP006570.1/CP006570.1	-	2	4610	4433	1/10/14	4/9/17	Complete Genome	University of Utah	SAMN02641639	GCA_000517425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/425/GCA_000517425.1_ASM51742v1	24407854	HS1
Klebsiella pneumoniae	573	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	5.72656	57.1216	chromosome:NZ_CP021859.1/CP021859.1; plasmid tig00000001_pilon:NZ_CP021856.1/CP021856.1; plasmid tig00000002_pilon:NZ_CP021857.1/CP021857.1; plasmid tig00000005_pilon:NZ_CP021858.1/CP021858.1; plasmid tig00000007_pilon:NZ_CP021860.1/CP021860.1; plasmid tig00000009_pilon:NZ_CP021861.1/CP021861.1	-	6	5858	5576	6/16/17	6/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014966	GCA_002197505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/505/GCA_002197505.1_ASM219750v1	-	AR_0125
Vibrio madracius	1224140	PRJNA172944	172944	Proteobacteria	Gammaproteobacteria	4.22975	44.5	-	ASHK01	1374	-	-	5/23/14	9/23/14	Contig	UFRJ	SAMN02798710	GCA_000695745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/745/GCA_000695745.1_Vshiloi354	24824949	A354
Bacillus massilionigeriensis	1805475	PRJEB17645	352501	Terrabacteria group	Firmicutes	4.21692	36.7	-	FPDX01	13	4133	3928	11/7/16	4/17/17	Scaffold	URMITE	SAMEA4534506	GCA_900117315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/315/GCA_900117315.1_PRJEB17645	-	Marseille-P2348
Klebsiella pneumoniae subsp. pneumoniae KPNIH24	1225181	PRJNA173233	173233	Proteobacteria	Gammaproteobacteria	5.73456	57.1176	chromosome:NZ_CP008797.1/CP008797.1; plasmid pKPC-484:NZ_CP008798.1/CP008798.1; plasmid pKPN-819:NZ_CP008799.1/CP008799.1; plasmid pKPN-e44:NZ_CP008800.1/CP008800.1	-	4	5867	5590	6/27/14	2/21/17	Complete Genome	NISC	SAMN02786855	GCA_000714675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/675/GCA_000714675.1_ASM71467v1	-	KPNIH24
Bacteroides congonensis	1871006	PRJEB18268	355716	FCB group	Bacteroidetes/Chlorobi group	6.37334	43	-	FQXY01	11	4967	4775	12/2/16	4/16/17	Contig	URMITE	SAMEA18121168	GCA_900130125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/125/GCA_900130125.1_PRJEB18268	-	Marseille-P3132
Parabacteroides timonensis	1871013	PRJEB18032	354757	FCB group	Bacteroidetes/Chlorobi group	6.48344	43.4	-	FQSE01	8	5056	4860	12/2/16	6/12/17	Scaffold	URMITE	SAMEA4555868	GCA_900128505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/505/GCA_900128505.1_PRJEB18032	-	Marseille-P3236
Olsenella urininfantis	1871033	PRJEB18941	361092	Terrabacteria group	Actinobacteria	1.74861	64.4	-	FTLR01	5	1601	1513	2/8/17	4/17/17	Scaffold	URMITE	SAMEA48261418	GCA_900155635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/635/GCA_900155635.1_Olsenella_urinainfantis	-	Marseille-P3197
Paenibacillus aquistagni	1852522	PRJEB20268	381719	Terrabacteria group	Firmicutes	5.38634	47.5	-	FXAZ01	18	4832	4676	4/20/17	5/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06295960	GCA_900177815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/815/GCA_900177815.1_IMG-taxon_2708742535_annotated_assembly	-	11
Collinsella vaginalis	1870987	PRJEB20374	382515	Terrabacteria group	Actinobacteria	2.16169	64.4	-	FWYK01	23	1889	1701	4/26/17	5/6/17	Scaffold	URMITE	SAMEA103972705	GCA_900176655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/655/GCA_900176655.1_PRJEB20374	-	Marseille-P2666
Oceanospirillales bacterium	1914300	PRJNA391950	391950	Proteobacteria	Gammaproteobacteria	3.14301	46.5	-	NVTO01	33	2878	2751	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568927	GCA_002401625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/625/GCA_002401625.1_ASM240162v1	-	-
Oceanospirillales bacterium	1914300	PRJNA391950	391950	Proteobacteria	Gammaproteobacteria	6.03802	54.6	-	NVUG01	301	5664	5412	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568909	GCA_002401845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/845/GCA_002401845.1_ASM240184v1	-	-
Candidatus Aerophobetes bacterium	2030807	PRJNA391950	391950	unclassified Bacteria	Bacteria candidate phyla	1.73168	38.4	-	NVUU01	144	1746	1582	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568895	GCA_002402025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/402/025/GCA_002402025.1_ASM240202v1	-	-
Moraxellaceae bacterium	1889775	PRJNA391950	391950	Proteobacteria	Gammaproteobacteria	4.62061	43.8	-	NVVG01	302	3984	3877	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568883	GCA_002402125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/402/125/GCA_002402125.1_ASM240212v1	-	-
Thiotrichales bacterium	2026796	PRJNA391950	391950	Proteobacteria	Gammaproteobacteria	2.91529	44	-	NVSX01	64	2970	2774	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568944	GCA_002401375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/375/GCA_002401375.1_ASM240137v1	-	-
Candidatus Kaiserbacteria bacterium	2030810	PRJNA391950	391950	unclassified Bacteria	Bacteria candidate phyla	1.05094	42	-	NVTG01	128	1229	1165	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568935	GCA_002401495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/495/GCA_002401495.1_ASM240149v1	-	-
Flavobacteriales bacterium	2021391	PRJNA391950	391950	FCB group	Bacteroidetes/Chlorobi group	4.18538	32.5	-	NVUQ01	150	3498	3443	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568899	GCA_002401955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/955/GCA_002401955.1_ASM240195v1	-	-
Candidatus Wolfebacteria bacterium	2030812	PRJNA391950	391950	unclassified Bacteria	Bacteria candidate phyla	0.897446	37	-	NVSU01	24	938	887	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568947	GCA_002401345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/345/GCA_002401345.1_ASM240134v1	-	-
Piscirickettsiaceae bacterium	2030828	PRJNA391950	391950	Proteobacteria	Gammaproteobacteria	1.5414	41.6	-	NVSW01	117	1644	1580	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568945	GCA_002401365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/365/GCA_002401365.1_ASM240136v1	-	-
Planctomycetes bacterium	2026780	PRJNA391950	391950	PVC group	Planctomycetes	3.08609	56.2	-	NVUV01	189	2667	2335	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568894	GCA_002402035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/402/035/GCA_002402035.1_ASM240203v1	-	-
Bacteroidetes bacterium	1898104	PRJNA391950	391950	FCB group	Bacteroidetes/Chlorobi group	2.48711	40.8	-	NVRZ01	269	1985	1947	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568968	GCA_002401055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/055/GCA_002401055.1_ASM240105v1	-	-
Lonsdalea britannica	1082704	PRJNA306788	306788	Proteobacteria	Gammaproteobacteria	3.923	55.1	-	LUTO01	145	3583	3386	4/27/17	5/3/17	Contig	Research Institute of Forest Ecology Environment and  Protection	SAMN04363620	GCA_002111635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/635/GCA_002111635.1_ASM211163v1	-	LMG 26268
Rhodospirillaceae bacterium	1898112	PRJNA391950	391950	Proteobacteria	Alphaproteobacteria	1.66647	54.2	-	NVRI01	176	1789	1630	9/28/17	9/28/17	Scaffold	University of Southern California	SAMN07568985	GCA_002400825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/825/GCA_002400825.1_ASM240082v1	-	-
Rhodobacteraceae bacterium	1904441	PRJNA391950	391950	Proteobacteria	Alphaproteobacteria	2.02362	48.6	-	NVSA01	171	2141	2012	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568967	GCA_002401045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/045/GCA_002401045.1_ASM240104v1	-	-
Gammaproteobacteria bacterium	1913989	PRJNA391950	391950	Proteobacteria	Gammaproteobacteria	1.49679	46.5	-	NVRF01	52	1510	1425	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568988	GCA_002400775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/775/GCA_002400775.1_ASM240077v1	-	-
Candidatus Marinimicrobia bacterium	2026760	PRJNA391950	391950	FCB group	Candidatus Marinimicrobia	1.82828	44.7	-	NVVH01	74	1696	1544	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568882	GCA_002402135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/402/135/GCA_002402135.1_ASM240213v1	-	-
SAR86 cluster bacterium	2030880	PRJNA391950	391950	Proteobacteria	Gammaproteobacteria	3.60987	49.4	-	NVUL01	134	3311	3246	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568904	GCA_002401885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/885/GCA_002401885.1_ASM240188v1	-	-
Flavobacteriaceae bacterium	1871037	PRJNA391950	391950	FCB group	Bacteroidetes/Chlorobi group	2.9591	35.1	-	NVRM01	154	2407	2345	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568981	GCA_002400885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/885/GCA_002400885.1_ASM240088v1	-	-
Rhizobiales bacterium	1909294	PRJNA391950	391950	Proteobacteria	Alphaproteobacteria	1.74696	41.2	-	NVQT01	21	1698	1640	9/28/17	9/28/17	Contig	University of Southern California	SAMN07569000	GCA_002400615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/615/GCA_002400615.1_ASM240061v1	-	-
Lonsdalea iberica	1082703	PRJNA306788	306788	Proteobacteria	Gammaproteobacteria	3.75541	55	-	LUTQ01	150	3395	3029	4/27/17	8/4/17	Contig	Research Institute of Forest Ecology Environment and  Protection	SAMN04363726	GCA_002111625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/625/GCA_002111625.1_ASM211162v1	-	LMG 26265
Lonsdalea populi	1172565	PRJNA306788	306788	Proteobacteria	Gammaproteobacteria	3.66041	55.4	-	LUTM01	57	3274	2843	4/27/17	8/4/17	Contig	Research Institute of Forest Ecology Environment and  Protection	SAMN04363576	GCA_002111555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/555/GCA_002111555.1_ASM211155v1	-	CFCC 11748
Neorhizobium sp. UBA3556	1946972	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	5.25425	59	-	DFNX01	17	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06456094	GCA_002376235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/235/GCA_002376235.1_ASM237623v1	28894102	-
Klebsiella variicola	244366	PRJNA327903	327903	Proteobacteria	Gammaproteobacteria	5.86047	57.1089	chromosome:NZ_CP017284.1/CP017284.1; plasmid pKPGJ-1a:NZ_CP017283.1/CP017283.1; plasmid pKPGJ-1b:NZ_CP017281.1/CP017281.1; plasmid pKPGJ-1c:NZ_CP017282.1/CP017282.1	-	4	5863	5588	2/7/17	2/22/17	Complete Genome	Gwangju Institute of Science and Technology	SAMN05361763	GCA_001989495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/495/GCA_001989495.1_ASM198949v1	28087584	GJ1
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA307276	307276	Proteobacteria	Gammaproteobacteria	5.69083	57.1064	chromosome:NZ_CP014010.1/CP014010.1; plasmid pRJF999:NZ_CP014011.1/CP014011.1	-	2	5621	5339	1/22/16	2/21/17	Complete Genome	Shanghai Ruijin Hospital Affiliated with Jiaotong University	SAMN04377968	GCA_001529935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/935/GCA_001529935.1_ASM152993v1	-	RJF999
Bordetella genomosp. 1	1395607	PRJNA385118	385118	Proteobacteria	Betaproteobacteria	5.35256	68.9	-	NEVR01	7	4895	4768	8/21/17	8/23/17	Contig	University of Michigan	SAMN06767132	GCA_002261435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/435/GCA_002261435.1_ASM226143v1	-	AU9795
Desulfovibrio sp. G11	631220	PRJNA407228	407228	Proteobacteria	delta/epsilon subdivisions	3.41493	57.1	chromosome:CP023415.1	-	1	3099	2892	9/21/17	9/21/17	Complete Genome	University of Minnesota Duluth	SAMN07640931	GCA_002334685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/685/GCA_002334685.1_ASM233468v1	-	G11
Neisseria dumasiana	1931275	PRJNA359492	359492	Proteobacteria	Betaproteobacteria	2.54319	50.7	-	MTAA01	154	2317	2173	4/24/17	4/26/17	Contig	Wadsworth Center / NYSDOH	SAMN06192247	GCA_002108535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/535/GCA_002108535.1_ASM210853v1	-	114725
Hydrogenophaga crassostreae	1763535	PRJNA308247	308247	Proteobacteria	Betaproteobacteria	4.92655	61.3	-	LVWD01	45	4628	4523	5/6/16	4/12/17	Contig	Korea University	SAMN04390147	GCA_001640105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/105/GCA_001640105.1_ASM164010v1	-	LPB0072
Solobacterium sp. UBA636	1947467	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.57197	37	-	DBOW01	145	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455724	GCA_002299675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/675/GCA_002299675.1_ASM229967v1	28894102	-
Oceanicella actignis	1189325	PRJEB17063	351145	Proteobacteria	Alphaproteobacteria	3.35107	72.2	-	FOHL01	29	3049	2929	10/29/16	9/19/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488119	GCA_900111545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/545/GCA_900111545.1_IMG-taxon_2615840710_annotated_assembly	-	DSM 24423
Alphaproteobacteria bacterium	1913988	PRJNA391950	391950	Proteobacteria	Alphaproteobacteria	1.2865	44.1	-	NVSI01	123	1448	1335	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568959	GCA_002401195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/195/GCA_002401195.1_ASM240119v1	-	-
Dechloromonas sp. UBA5017	1946401	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	3.84278	61.1	-	DGYB01	201	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455737	GCA_002396525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/525/GCA_002396525.1_ASM239652v1	28894102	-
Richelia sp. UBA3958	1947385	PRJNA348753	348753	Terrabacteria group	Cyanobacteria/Melainabacteria group	8.01193	37	-	DGDG01	424	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452267	GCA_002385315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/315/GCA_002385315.1_ASM238531v1	28894102	-
Chthonomonas sp. UBA2017	1946326	PRJNA348753	348753	Terrabacteria group	Armatimonadetes	2.49775	58.6	-	DDCB01	49	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451672	GCA_002335425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/425/GCA_002335425.1_ASM233542v1	28894102	-
Candidatus Peribacter sp. UBA2170	1961373	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	0.948764	44.3	-	DCWE01	106	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455573	GCA_002327505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/505/GCA_002327505.1_ASM232750v1	28894102	-
Oblitimonas sp. UBA1343	1946998	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.94114	48.5	-	DBSL01	100	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06453406	GCA_002306515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/515/GCA_002306515.1_ASM230651v1	28894102	-
Burkholderia singularis	1503053	PRJEB20285	394229	Proteobacteria	Betaproteobacteria	5.53811	64.3	-	FXAN01	135	4972	4653	7/14/17	9/20/17	Contig	UZH	SAMEA103971362	GCA_900176645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/645/GCA_900176645.1_LMG28154v1	-	LMG 28154
Nitrosopumilales archaeon	2026768	PRJNA391950	391950	TACK group	Thaumarchaeota	0.931996	35.4	-	NVRT01	95	1192	1076	9/20/17	9/20/17	Contig	University of Southern California	SAMN07568974	GCA_002317825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/825/GCA_002317825.1_ASM231782v1	-	-
Hydrogenovibrio sp. UBA650	1946606	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.07215	41.4	-	DBOI01	172	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455004	GCA_002299245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/245/GCA_002299245.1_ASM229924v1	28894102	-
Candidatus Microthrix sp. UBA886	1946224	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.7274	42	-	DBFG01	194	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457643	GCA_002294225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/225/GCA_002294225.1_ASM229422v1	28894102	-
Lactobacillus pentosiphilus	1714682	PRJDB4275	391104	Terrabacteria group	Firmicutes	2.72392	44.8	-	BCMI01	131	2605	2506	6/13/17	9/19/17	Scaffold	NARO Institute of Livestock and Grassland Science	SAMD00042398	GCA_002217985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/985/GCA_002217985.1_ASM221798v1	-	IWT25
Candidatus Dactylopiibacterium carminicum	857335	PRJNA291435	291435	Proteobacteria	Betaproteobacteria	3.55051	62.7	-	NMRM01	124	3454	3153	9/1/17	9/4/17	Scaffold	Centro de Ciencias Genomicas-UNAM	SAMN07349606	GCA_002284935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/935/GCA_002284935.1_ASM228493v1	-	NFDO
Actinomyces gaoshouyii	1960083	PRJNA374602	374602	Terrabacteria group	Actinobacteria	2.26274	71.1	-	MVIV01	20	1902	1784	3/24/17	9/5/17	Scaffold	China CDC	SAMN06329440	GCA_002072175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/175/GCA_002072175.1_ASM207217v1	-	pika_113
Azorhizobium sp. 32-67-21	1970319	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	3.91969	67.4	-	NCES01	638	4031	3673	8/16/17	8/16/17	Scaffold	None	SAMN06622340	GCA_002280795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/795/GCA_002280795.1_ASM228079v1	-	-
Bordetella genomosp. 5	1395608	PRJNA385118	385118	Proteobacteria	Betaproteobacteria	5.20696	67.2	-	NEVN01	13	4676	4539	8/21/17	8/23/17	Contig	University of Michigan	SAMN06767137	GCA_002261475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/475/GCA_002261475.1_ASM226147v1	-	AU14646
Sphingobacterium cellulitidis	1768011	PRJNA395487	395487	FCB group	Bacteroidetes/Chlorobi group	4.60555	37.5	-	NOUX01	32	3998	3898	8/10/17	8/12/17	Contig	The University of Melbourne	SAMN07407600	GCA_002245855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/855/GCA_002245855.1_ASM224585v1	-	R-53603
Bordetella genomosp. 7	1416805	PRJNA385118	385118	Proteobacteria	Betaproteobacteria	4.1446	65.5	-	NEVI01	23	3905	3805	8/21/17	8/23/17	Contig	University of Michigan	SAMN06767145	GCA_002261415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/415/GCA_002261415.1_ASM226141v1	-	AU23756
Bordetella genomosp. 4	463044	PRJNA385118	385118	Proteobacteria	Betaproteobacteria	5.46048	59.6	-	NEVO01	19	4966	4860	8/21/17	8/23/17	Contig	University of Michigan	SAMN06767136	GCA_002261295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/295/GCA_002261295.1_ASM226129v1	-	AU14378
Pannonibacter sp. P2PFMT1	2003582	PRJEB20970	395451	Proteobacteria	Alphaproteobacteria	5.10571	63.5	-	FYAO01	30	-	-	7/22/17	7/22/17	Contig	Griffith University	SAMEA104113270	GCA_900185675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/675/GCA_900185675.1_P2PFMT1_Assembly_1	-	-
Chromobacterium sphagni	1903179	PRJNA342531	342531	Proteobacteria	Betaproteobacteria	4.9037	63.5	-	MKCS01	5	4561	4313	10/27/16	8/23/17	Contig	USDA-ARS	SAMN05761788	GCA_001855575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/575/GCA_001855575.1_ASM185557v1	-	IIBBL 37-2
Paraferrimonas sp. AFRC7-2-1	2013866	PRJNA399243	399243	Proteobacteria	Gammaproteobacteria	3.1952	47.2	-	NRRB01	19	2966	2866	8/31/17	9/2/17	Contig	"Third Institute of Oceanography, SOA"	SAMN07528618	GCA_002282895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/895/GCA_002282895.1_ASM228289v1	-	AFRC7-2-1
Staphylococcus saccharolyticus	33028	PRJNA375758	375758	Terrabacteria group	Firmicutes	2.65912	33.9	-	NDFL01	193	2547	2458	8/29/17	8/30/17	Contig	SysMilk	SAMN06718492	GCA_002276615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/615/GCA_002276615.1_ASM227661v1	-	OG2-2
Bacillus swezeyi	1925020	PRJNA299292	299292	Terrabacteria group	Firmicutes	4.51614	44.3	-	MRBK01	96	4495	4179	1/23/17	9/18/17	Scaffold	NCAUR-ARS-USDA	SAMN06102001	GCA_001969815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/815/GCA_001969815.1_ASM196981v1	28809143	NRRL B-41294
Chloracidobacterium sp. UBA2026	1946315	PRJNA348753	348753	Acidobacteria	Blastocatellia	3.74918	52.9	-	DDBS01	145	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454470	GCA_002333435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/435/GCA_002333435.1_ASM233343v1	28894102	-
Lachnotalea glycerini	1763509	PRJNA395025	395025	Terrabacteria group	Firmicutes	2.99918	36.1	-	NOKS01	2899	4058	3836	8/14/17	8/14/17	Contig	CHU de Quebec - Universite Laval	SAMN07368595	GCA_002251105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/105/GCA_002251105.1_ASM225110v1	-	DLD10
Zobellella denitrificans	347534	PRJNA394555	394555	Proteobacteria	Gammaproteobacteria	4.0517	63.8	-	NMUO01	217	3850	3568	7/31/17	8/3/17	Contig	Taipei Medical University	SAMN07352936	GCA_002237365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/365/GCA_002237365.1_ASM223736v1	-	ZD1
Methylobacterium indicum	1775910	PRJNA268285	268285	Proteobacteria	Alphaproteobacteria	6.92165	70.4	-	JTHF01	506	6410	5954	6/30/15	7/24/17	Contig	CSIR-Institute of Microbial Technology	SAMN03217758	GCA_001043895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/895/GCA_001043895.1_ASM104389v1	26776106	SE2.11
Herbaspirillum sp. meg3	2025949	PRJNA397799	397799	Proteobacteria	Betaproteobacteria	5.4658	57.1	chromosome:NZ_CP022736.1/CP022736.1	-	1	4919	4814	8/16/17	8/17/17	Complete Genome	Jeju National University	SAMN07488278	GCA_002257565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/565/GCA_002257565.1_ASM225756v1	-	meg3
Halorubrum chaoviator	335819	PRJEB21388	391616	Euryarchaeota	Halobacteria	3.66685	66.4	-	FZNK01	49	3609	3382	7/13/17	7/21/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06266787	GCA_900188075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/075/GCA_900188075.1_IMG-taxon_2724679704_annotated_assembly	-	DSM 19316
Candidatus Frackibacter sp. WG12	2017977	PRJEB16893	350952	Terrabacteria group	Firmicutes	2.77121	33.5	-	FOCA01	52	2729	2574	10/29/16	8/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488698	GCA_900109985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/985/GCA_900109985.1_IMG-taxon_2642422545_annotated_assembly	-	WG12
Thalassotalea crassostreae	1763536	PRJNA308352	308352	Proteobacteria	Gammaproteobacteria	3.81924	38.7	-	LRUI01	47	3324	3229	5/2/16	7/19/17	Scaffold	Korea University	SAMN04394586	GCA_001652445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/445/GCA_001652445.1_ASM165244v1	-	LPB0090
Barnesiella sp. An55	1965646	PRJNA377666	377666	FCB group	Bacteroidetes/Chlorobi group	3.03018	51.4	-	NFHZ01	49	2489	2391	5/30/17	6/12/17	Contig	Veterinary Research Institute	SAMN06473738	GCA_002161555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/555/GCA_002161555.1_ASM216155v1	-	An55
Saccharibacillus sp. O23	2009338	PRJNA389630	389630	Terrabacteria group	Firmicutes	6.04015	57	-	NJDE01	42	5265	5116	6/22/17	6/26/17	Contig	Institute of Microbial Technology	SAMN07204269	GCA_002205895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/895/GCA_002205895.1_ASM220589v1	-	O23
Micromonospora echinospora	1877	PRJNA386440	386440	Terrabacteria group	Actinobacteria	7.70037	72.4	-	NGNT01	77	6608	6231	8/23/17	8/25/17	Scaffold	Jiangxi Normal University	SAMN06947364	GCA_002266845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/845/GCA_002266845.1_ASM226684v1	-	ATCC 15837
Kingella negevensis	1522312	PRJEB6958	258147	Proteobacteria	Betaproteobacteria	2.13055	45.5	-	CCNJ01	78	2278	2012	9/6/14	7/19/17	Contig	URMITE	SAMEA2697679	GCA_000751855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/855/GCA_000751855.1_Kingella_negevensis	-	-
Actinomyces liubingyangii	1921764	PRJNA355081	355081	Terrabacteria group	Actinobacteria	1.98707	54.8	-	MQSV01	12	1685	1622	12/16/16	7/11/17	Contig	China CDC	SAMN06062070	GCA_001907275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/275/GCA_001907275.1_ASM190727v1	-	VUL4_2
Listeria sp. ILCC801	1649188	PRJEB9225	390501	Terrabacteria group	Firmicutes	2.71576	40.4	-	FYBO01	21	2752	2636	6/15/17	7/5/17	Contig	JUSTUS LIEBIG UNIVERSITY	SAMEA104121261	GCA_900186135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/135/GCA_900186135.1_ILCC792.fasta	-	-
Methanopyrus sp. KOL6	1937004	PRJNA362699	362699	Euryarchaeota	Methanopyri	1.43031	57.7	chromosome:NZ_CP019470.1/CP019470.1	-	1	1555	1504	6/20/17	6/22/17	Chromosome	Zhejiang University of Technology	SAMN06246254	GCA_002201915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/915/GCA_002201915.1_ASM220191v1	28744269	KOL6
Streptomyces albireticuli	1940	PRJNA291301	291301	Terrabacteria group	Actinobacteria	8.45457	72.4	-	NSJV01	714	7379	6692	9/5/17	9/7/17	Contig	Oak Ridge National Laboratory	SAMN07502174	GCA_002286695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/695/GCA_002286695.1_ASM228669v1	-	NRRL B-1670
Kineosporia sp. R_H_3	1961848	PRJNA317721	317721	Terrabacteria group	Actinobacteria	7.26068	74.2	-	MWLL01	270	6697	6345	6/19/17	6/22/17	Scaffold	TU Berlin	SAMN06335525	GCA_002198675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/675/GCA_002198675.1_ASM219867v1	-	R_H_3
Pigmentiphaga sp. NML030171	2008676	PRJNA387195	387195	Proteobacteria	Betaproteobacteria	5.86214	67.5	-	NINX01	57	5557	5375	6/9/17	6/12/17	Contig	Public Health Agency of Canada	SAMN07162456	GCA_002188635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/635/GCA_002188635.1_ASM218863v1	-	NML030171
Erysipelatoclostridium sp. An15	1965566	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.01803	30.2	-	NFLA01	127	3051	2886	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473620	GCA_002160675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/675/GCA_002160675.1_ASM216067v1	-	An15
Drancourtella sp. An177	1965573	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.96756	44.8	-	NFKN01	94	2924	2777	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473641	GCA_002160415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/415/GCA_002160415.1_ASM216041v1	-	An177
Gordonibacter urolithinfaciens	1335613	PRJNA377666	377666	Terrabacteria group	Actinobacteria	3.54001	66	-	NFJN01	66	3074	2914	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473672	GCA_002159895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/895/GCA_002159895.1_ASM215989v1	-	An234A
Muribaculum sp. An287	1965623	PRJNA377666	377666	FCB group	Bacteroidetes/Chlorobi group	2.33329	49	-	NFIX01	40	2098	2006	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473709	GCA_002159585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/585/GCA_002159585.1_ASM215958v1	-	An287
Massiliomicrobiota sp. An142	1965564	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.77271	31.5	-	NFLD01	101	2956	2805	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473615	GCA_002160725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/725/GCA_002160725.1_ASM216072v1	-	An142
Citrobacter europaeus	1914243	PRJEB13613	324032	Proteobacteria	Gammaproteobacteria	5.24763	52	-	FLUX01	53	5091	4859	7/22/16	5/31/17	Contig	INSTITUT PASTEUR	SAMEA3935941	GCA_900080005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/005/GCA_900080005.1_ASM90008000v1	-	A121
Crenothrix polyspora	360316	PRJEB19189	374819	Proteobacteria	Gammaproteobacteria	3.52773	44.7	-	FUKJ01	467	3665	3245	2/16/17	5/31/17	Contig	"Department of Microbiology and Ecosystem Science, University of Vienna"	SAMEA80830918	GCA_900163745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/745/GCA_900163745.1_ASM90016374v1	-	-
Gemmiger sp. An194	1965582	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.07185	59.3	-	NFKA01	50	2867	2741	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473656	GCA_002160145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/145/GCA_002160145.1_ASM216014v1	-	An194
Sphingopyxis ummariensis	429001	PRJEB20276	381735	Proteobacteria	Alphaproteobacteria	3.57701	65.2	-	FXWL01	8	3468	3374	5/13/17	5/24/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06295984	GCA_900177755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/755/GCA_900177755.1_IMG-taxon_2708742469_annotated_assembly	-	UI2
Bacillus acidiceler	371036	PRJNA381926	381926	Terrabacteria group	Firmicutes	4.78387	32.8	-	NCSZ01	69	4644	4466	5/23/17	6/16/17	Contig	Lycoming College	SAMN06692364	GCA_002156925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/925/GCA_002156925.1_ASM215692v1	-	NRRL B-41736
Brucella sp. 09RB8910	1844051	PRJNA347474	347474	Proteobacteria	Alphaproteobacteria	3.59298	57.1	chromosome 1:NZ_CP019390.1/CP019390.1; chromosome 2:NZ_CP019391.1/CP019391.1	-	2	3634	3356	1/26/17	4/17/17	Complete Genome	Viginia Tech University	SAMN05890480	GCA_001971805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/805/GCA_001971805.1_ASM197180v1	-	09RB8910
Alloscardovia macacae	1160091	PRJNA383345	383345	Terrabacteria group	Actinobacteria	1.8296	56.1	-	NEKB01	41	1546	1476	5/11/17	5/22/17	Contig	University of Massachusetts	SAMN06761460	GCA_002127665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/665/GCA_002127665.1_ASM212766v1	-	UMA81211
Phycisphaera sp. TMED151	1986610	PRJNA385857	385857	PVC group	Planctomycetes	1.63293	55.8	-	NHHA01	26	1461	1399	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972005	GCA_002169945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/945/GCA_002169945.1_ASM216994v1	-	-
Kiloniella majae	1938558	PRJNA347280	347280	Proteobacteria	Alphaproteobacteria	4.43424	45.6	-	MTSY01	150	4135	4068	5/5/17	6/21/17	Contig	Universidad de Santiago de Compostela	SAMN05878521	GCA_002118285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/118/285/GCA_002118285.1_ASM211828v1	-	SBRF1.10
Arthrobacter agilis	37921	PRJNA382792	382792	Terrabacteria group	Actinobacteria	3.23533	68.8	-	NFSD01	34	2995	2885	5/25/17	5/31/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN06725986	GCA_002157565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/565/GCA_002157565.1_ASM215756v1	-	4042
Gluconobacter sp. DsW_058	1511210	PRJNA253128	253128	Proteobacteria	Alphaproteobacteria	2.83442	55.9	-	JOPH01	90	2633	2510	5/19/17	5/24/17	Contig	Cornell University	SAMN02866236	GCA_002153615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/615/GCA_002153615.1_ASM215361v1	-	DsW_058
Anaeromassilibacillus sp. An250	1965604	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.59896	53.3	-	NFJK01	76	3423	3225	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473682	GCA_002159845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/845/GCA_002159845.1_ASM215984v1	-	An250
Bacillus filamentosus	1402861	PRJNA373952	373952	Terrabacteria group	Firmicutes	5.14921	36.4	-	MWSI01	31	5153	4970	8/1/17	8/3/17	Scaffold	CSIR- National Chemical Laboratory	SAMN06319185	GCA_002237735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/735/GCA_002237735.1_ASM223773v1	-	DSM 27955
Tistlia consotensis	1321365	PRJEB21397	391607	Proteobacteria	Alphaproteobacteria	6.92945	71.5	-	FZNU01	93	6345	6203	7/12/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06265365	GCA_900188055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/055/GCA_900188055.1_IMG-taxon_2724679789_annotated_assembly	-	DSM 21585
Mycobacterium salmoniphilum	404941	PRJNA323571	323571	Terrabacteria group	Actinobacteria	4.76627	64.3	-	MAFR01	63	4684	4494	3/3/17	3/6/17	Contig	LNCC	SAMN05186798	GCA_002013685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/685/GCA_002013685.1_ASM201368v1	-	SC
Selenomonas sp. oral taxon 478	712538	PRJNA282954	282954	Terrabacteria group	Firmicutes	2.28414	57.1	chromosome 1:NZ_CP012071.1/CP012071.1	-	1	2205	2060	7/31/15	4/17/17	Complete Genome	The Forsyth Institute	SAMN03704032	GCA_001189555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/555/GCA_001189555.1_ASM118955v1	-	F0592
Kocuria indica	1049583	PRJNA373958	373958	Terrabacteria group	Actinobacteria	2.87633	68.9	-	MWSL01	48	2611	2390	8/1/17	8/3/17	Contig	CSIR- National Chemical Laboratory	SAMN06319220	GCA_002237805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/805/GCA_002237805.1_ASM223780v1	-	DSM 25126
Nitrospira cf. moscoviensis SBR1015	96242	PRJEB13176	385582	Nitrospirae	Nitrospira	3.65902	56.8	-	FJVM02	63	3680	3566	5/5/17	6/4/17	Scaffold	THE UNIVERSITY OF HONG KONG	SAMEA3909873	GCA_900078535.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/535/GCA_900078535.2_Nitrospira-SG-bin1	-	-
Bordetella genomosp. 6	463024	PRJNA385118	385118	Proteobacteria	Betaproteobacteria	5.06646	68.3	-	NEVV01	7	4821	4691	8/21/17	8/23/17	Contig	University of Michigan	SAMN06767127	GCA_002261365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/365/GCA_002261365.1_ASM226136v1	-	AU3139
Xanthomonas axonopodis pv. manihotis str. UA303	1185662	PRJNA163719	163719	Proteobacteria	Gammaproteobacteria	4.87297	65.1	-	AKEM01	130	4313	3994	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090343	GCA_000265565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/565/GCA_000265565.1_UA303	22699502	UA303
Marinobacter salarius	1420917	PRJNA227392	227392	Proteobacteria	Gammaproteobacteria	4.61653	57.1	chromosome:NZ_CP007152.1/CP007152.1	-	1	4376	2973	2/5/14	4/10/17	Complete Genome	Swinburne University of Technology	SAMN02401947	GCA_000831005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/005/GCA_000831005.1_ASM83100v1	24855296	R9SW1
Mycobacterium paraense	767916	PRJNA308282	308282	Terrabacteria group	Actinobacteria	5.76567	69.1	-	LQPN01	81	5507	5311	4/20/17	4/22/17	Contig	University of Trento	SAMN04216943	GCA_002101825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/825/GCA_002101825.1_ASM210182v1	25487637	IEC33
Pantoea allii	574096	PRJNA252983	252983	Proteobacteria	Gammaproteobacteria	5.01068	53	-	MLFE01	92	4682	4114	4/18/17	4/18/17	Contig	University of Pretoria	SAMN05908195	GCA_002095545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/545/GCA_002095545.1_ASM209554v1	28255640	LMG 24248
Pseudomonas versuta	1788301	PRJNA353166	353166	Proteobacteria	Gammaproteobacteria	5.10124	58.3	-	MPJD01	101	4723	4524	12/12/16	4/26/17	Contig	University of Malaya	SAMN06011244	GCA_001901345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/345/GCA_001901345.1_ASM190134v1	-	A4R1.12
Demequina sp. NBRC 110052	1570341	PRJDB3263	276645	Terrabacteria group	Actinobacteria	2.61412	69.6	-	BBRI01	5	2471	2406	4/1/17	4/17/17	Contig	National Institute of Technology and Evaluation Biological Resource Center	SAMD00022842	GCA_002090075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/075/GCA_002090075.1_ASM209007v1	-	NBRC 110052
Cronobacter sakazakii ES15	1138308	PRJNA81953	81953	Proteobacteria	Gammaproteobacteria	4.26867	57.1	chromosome:NC_017933.1/CP003312.1	-	1	4097	3902	5/17/12	3/30/17	Complete Genome	Seoul National University	SAMN02603850	GCA_000263215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/215/GCA_000263215.1_ASM26321v1	22843579	ES15
Mycoplasma agassizii	33922	PRJNA397947	397947	Terrabacteria group	Tenericutes	1.27497	28.5	-	NQMN01	8	1025	965	8/28/17	8/30/17	Scaffold	"University of Nevada, Reno"	SAMN07498192	GCA_002272945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/945/GCA_002272945.1_ASM227294v1	-	PS6
Corynebacterium resistens DSM 45100	662755	PRJNA39683	39683	Terrabacteria group	Actinobacteria	2.60131	57.1	chromosome:NC_015673.1/CP002857.1	-	1	2269	2139	6/15/11	4/17/17	Complete Genome	"Center for Biotechnology, Bielefeld University"	SAMN02603065	GCA_000177535.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/535/GCA_000177535.2_ASM17753v2	22524407	DSM 45100
Pseudoflavonifractor sp. An187	1965578	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.60686	58	-	NFKG01	75	2360	2217	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473650	GCA_002160275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/275/GCA_002160275.1_ASM216027v1	-	An187
Clostridiales bacterium	1898207	PRJEB21851	395186	Terrabacteria group	Firmicutes	3.34113	53	-	FZQO01	20	3013	2920	7/21/17	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06297421	GCA_900199385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/199/385/GCA_900199385.1_IMG-taxon_2623620525_annotated_assembly	-	R-7
Mycobacterium marseillense	701042	PRJNA354248	354248	Terrabacteria group	Actinobacteria	5.45685	67.7	-	MVHX01	112	5158	4964	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064246	GCA_002086345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/345/GCA_002086345.1_ASM208634v1	-	DSM 45437
Mycobacterium paraintracellulare	1138383	PRJNA354248	354248	Terrabacteria group	Actinobacteria	5.47411	68.1	-	NCXN01	111	5219	5057	4/21/17	4/24/17	Contig	San Raffaele Scientific Institute	SAMN06651659	GCA_002104735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/735/GCA_002104735.1_ASM210473v1	-	KCTC 29084
Desulfococcus sp. 4484_241	1968522	PRJNA362212	362212	Proteobacteria	delta/epsilon subdivisions	2.33626	50.6	-	MZGQ01	128	2258	2122	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06561839	GCA_002085115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/115/GCA_002085115.1_ASM208511v1	-	-
Selenomonas sputigena ATCC 35185	546271	PRJNA51247	51247	Terrabacteria group	Firmicutes	2.56836	57.1	chromosome:NC_015437.1/CP002637.1	-	1	2384	2287	4/21/11	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713607	GCA_000208405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/208/405/GCA_000208405.1_ASM20840v1	-	ATCC 35185
Carboxydocella sp. JDF658	1926600	PRJDB5366	377281	Terrabacteria group	Firmicutes	2.59757	49.2	-	BDLR01	270	2684	2504	2/28/17	3/22/17	Scaffold	"Laboratory of Marine Microbiology, Graduate School of Agriculture, Kyoto University"	SAMD00068890	GCA_002049395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/395/GCA_002049395.1_ASM204939v1	-	JDF658
Alkalitalea saponilacus	889453	PRJEB19705	377507	FCB group	Bacteroidetes/Chlorobi group	4.5567	39.4	-	FUYV01	96	3561	3410	3/8/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03080601	GCA_900168165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/165/GCA_900168165.1_IMG-taxon_2595698211_annotated_assembly	-	DSM 24412
Bacillus alkalitelluris	304268	PRJNA362673	362673	Terrabacteria group	Firmicutes	4.88312	37.8	-	MTSQ01	7	4606	4423	5/19/17	6/16/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN06245865	GCA_002153425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/425/GCA_002153425.1_ASM215342v1	-	10368
Candidatus Entotheonella palauensis	93172	PRJEB12599	319514	Nitrospinae/Tectomicrobia group	Candidatus Tectomicrobia	6.1089	56.5	-	FKIO01	1354	5899	5279	4/23/16	8/3/17	Contig	GeneWiz	SAMEA3913524	GCA_900079105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/105/GCA_900079105.1_E.factor.ts	-	-
Lachnospiraceae bacterium	1898203	PRJEB21847	395190	Terrabacteria group	Firmicutes	3.49202	38.8	-	FZRB01	47	2928	2787	7/29/17	8/7/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06297422	GCA_900199595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/199/595/GCA_900199595.1_IMG-taxon_2623620511_annotated_assembly	-	LC2019
Plantibacter flavus	150123	PRJEB20278	381729	Terrabacteria group	Actinobacteria	4.30006	69.1	-	FXAP01	11	4038	3944	4/20/17	5/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06295974	GCA_900177615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/615/GCA_900177615.1_IMG-taxon_2708742471_annotated_assembly	-	VKM Ac-2504
Oceanospirillum multiglobuliferum	64969	PRJNA356609	356609	Proteobacteria	Gammaproteobacteria	3.72899	45.5	-	MTSM01	509	3280	3143	3/21/17	4/6/17	Contig	University of New Hampshire - Manchester	SAMN06116947	GCA_002059185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/185/GCA_002059185.1_ASM205918v1	-	ATCC 33336
Klebsiella pneumoniae	573	PRJEB99	169208	Proteobacteria	Gammaproteobacteria	5.65568	57.0991	chromosome:NZ_FO834906.1/FO834906.1; plasmid I:NZ_FO834904.1/FO834904.1; plasmid II:NZ_FO834905.1/FO834905.1	-	3	5626	5263	3/21/14	2/21/17	Complete Genome	Genoscope CEA	SAMEA3283117	GCA_000968155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/155/GCA_000968155.1_ASM96815v1	25341126	Kp52.145
Klebsiella pneumoniae	573	PRJNA311034	311034	Proteobacteria	Gammaproteobacteria	5.85294	57.0986	chromosome:NZ_CP014294.1/CP014294.1; plasmid unnamed1:NZ_CP014295.1/CP014295.1; plasmid unnamed11:NZ_CP014296.1/CP014296.1; plasmid unnamed13:NZ_CP014297.1/CP014297.1; plasmid unnamed2:NZ_CP014298.1/CP014298.1; plasmid unnamed3:NZ_CP014299.1/CP014299.1; plasmid unnamed5:NZ_CP014300.1/CP014300.1	-	7	5977	5370	3/2/17	4/10/17	Complete Genome	USAMRIID	SAMN04457965	GCA_002009075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/075/GCA_002009075.1_ASM200907v1	-	KP38731
Endozoicomonas arenosclerae	1633495	PRJNA279233	279233	Proteobacteria	Gammaproteobacteria	6.21677	47.2	-	LASB01	2501	-	-	2/16/16	2/16/16	Contig	UFRJ	SAMN03444428	GCA_001562005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/005/GCA_001562005.1_ASM156200v1	26786501	E-MC227
Clostridium roseum	84029	PRJNA322792	322792	Terrabacteria group	Firmicutes	5.06773	29.8	-	LZYV01	124	4634	4410	2/23/17	2/25/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05170513	GCA_002006215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/215/GCA_002006215.1_ASM200621v1	-	DSM 7320
Archaeoglobus sp. JdFR-26	1934983	PRJNA269163	269163	Euryarchaeota	Archaeoglobi	0.644825	40.3	-	MTMN01	21	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226343	GCA_002010115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/115/GCA_002010115.1_ASM201011v1	28350381	-
Methylocaldum sp. SAD2	1912212	PRJNA349982	349982	Proteobacteria	Gammaproteobacteria	5.90741	58.2	-	MUGL01	95	5347	5127	5/11/17	5/22/17	Contig	The Ohio State University	SAMN05933458	GCA_002127725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/725/GCA_002127725.1_ASM212772v1	-	SAD2
Rodentibacter ratti	1906745	PRJNA343597	343597	Proteobacteria	Gammaproteobacteria	2.57154	40.9	-	MLHK01	104	2629	2452	2/15/17	4/17/17	Contig	University of Copenhagen	SAMN05892258	GCA_002000425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/425/GCA_002000425.1_ASM200042v1	-	H1983213011
Colwellia aestuarii	329993	PRJNA380006	380006	Proteobacteria	Gammaproteobacteria	4.29282	38.6	-	NBOD01	26	3799	3667	4/21/17	4/24/17	Scaffold	"Third Institute Of Oceanography,State Oceanic Administration"	SAMN06626650	GCA_002104435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/435/GCA_002104435.1_ASM210443v1	-	CGMCC1.6965
Rodentibacter genomosp. 2	1908266	PRJNA343597	343597	Proteobacteria	Gammaproteobacteria	2.534	40	-	MLHO01	105	2456	2282	2/15/17	4/17/17	Contig	University of Copenhagen	SAMN05892294	GCA_002000435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/435/GCA_002000435.1_ASM200043v1	-	1996246016
Rodentibacter trehalosifermentans	1908263	PRJNA343597	343597	Proteobacteria	Gammaproteobacteria	2.59216	40.9	-	MLHL01	123	2638	2450	2/15/17	4/17/17	Contig	University of Copenhagen	SAMN05892265	GCA_002000545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/545/GCA_002000545.1_ASM200054v1	-	H1987082031
Nocardia donostiensis	1538463	PRJNA304984	304984	Terrabacteria group	Actinobacteria	5.7901	66.6	-	MUMY01	49	5209	4881	2/6/17	4/17/17	Contig	CDC	SAMN06246729	GCA_001989395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/395/GCA_001989395.1_ASM198939v1	26914251	X1655
Rodentibacter rarus	1908260	PRJNA343597	343597	Proteobacteria	Gammaproteobacteria	2.52766	40.5	-	MLHI01	179	2526	2283	2/15/17	4/17/17	Contig	University of Copenhagen	SAMN05892249	GCA_002000405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/405/GCA_002000405.1_ASM200040v1	-	2005150027
Acinetobacter genomosp. 33YU	1675530	PRJNA287473	287473	Proteobacteria	Gammaproteobacteria	4.34437	38.5	-	LFZS01	102	4208	4003	2/9/17	4/6/17	Scaffold	"Sir Run Run Shaw hospital, School of Medicine, Zhejiang University"	SAMN03784702	GCA_001990735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/735/GCA_001990735.1_ASM199073v1	-	A362
Rhizobium rhizosphaerae	1672749	PRJNA357196	357196	Proteobacteria	Alphaproteobacteria	5.18174	64.7	-	MSPX01	68	4531	4398	4/3/17	4/5/17	Contig	Chinese Academy of Agricultural Sciences	SAMN06134708	GCA_002078095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/095/GCA_002078095.1_ASM207809v1	28154946	RD15
Rodentibacter heylii	1906744	PRJNA343597	343597	Proteobacteria	Gammaproteobacteria	2.49656	40.2	-	MLAC01	151	2451	2266	2/15/17	2/22/17	Contig	University of Copenhagen	SAMN05858759	GCA_001998595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/595/GCA_001998595.1_ASM199859v1	-	1999250011
Klebsiella pneumoniae	573	PRJNA246471	246471	Proteobacteria	Gammaproteobacteria	5.81001	57.0961	chromosome:NZ_CP011624.1/CP011624.1; plasmid pCAV1344-250:NZ_CP011623.1/CP011623.1; plasmid pCAV1344-3741:NZ_CP011619.1/CP011619.1; plasmid pCAV1344-40:NZ_CP011620.1/CP011620.1; plasmid pCAV1344-78:NZ_CP011621.1/CP011621.1; plasmid pKPC_CAV1344:NZ_CP011622.1/CP011622.1	-	6	5943	5653	6/9/15	2/21/17	Complete Genome	University of Oxford	SAMN03024590	GCA_001022175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/175/GCA_001022175.1_ASM102217v1	-	CAV1344
Flavobacterium crassostreae	1763534	PRJNA315792	315792	FCB group	Bacteroidetes/Chlorobi group	2.76284	35.9	-	LVEP01	77	2530	2432	7/18/16	3/2/17	Contig	Korea University	SAMN04570274	GCA_001686945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/945/GCA_001686945.1_ASM168694v1	-	LPB0076
Haemophilus massiliensis	1461579	PRJEB5521	244989	Proteobacteria	Gammaproteobacteria	2.55613	46	-	CCNK01	46	2440	2272	8/22/14	3/3/17	Contig	URMITE	SAMEA2697686	GCA_000752995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/995/GCA_000752995.1_Haemophilus_massiliensis	-	-
Paenibacillus lautus	1401	PRJNA411887	411887	Terrabacteria group	Firmicutes	6.81112	51.3	-	NXFP01	16	6133	5980	10/1/17	10/1/17	Scaffold	Banaras Hindu University	SAMN07690119	GCA_002407025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/407/025/GCA_002407025.1_ASM240702v1	-	BHU3
Klebsiella pneumoniae	573	PRJNA246471	246471	Proteobacteria	Gammaproteobacteria	5.8747	57.0929	chromosome:NZ_CP013322.1/CP013322.1; plasmid pCAV1193-166:NZ_CP013324.1/CP013324.1; plasmid pCAV1193-258:NZ_CP013323.1/CP013323.1; plasmid pCAV1193-3741:NZ_CP013321.1/CP013321.1; plasmid pCAV1193-78:NZ_CP013326.1/CP013326.1; plasmid pKPC_CAV1193:NZ_CP013325.1/CP013325.1	-	6	6008	5715	12/3/15	2/21/17	Complete Genome	University of Oxford	SAMN03733725	GCA_001456135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/135/GCA_001456135.1_ASM145613v1	26823590	CAV1193
Haloterrigena daqingensis	588898	PRJEB18899	360766	Euryarchaeota	Halobacteria	3.83092	61.4	-	FTNP01	14	3742	3641	1/14/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421809	GCA_900156445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/445/GCA_900156445.1_IMG-taxon_2681812915_annotated_assembly	-	CGMCC 1.8909
Viridibacillus sp. FSL H7-0596	1928923	PRJNA343020	343020	Terrabacteria group	Firmicutes	4.47587	35.4	-	MSPV01	31	4424	4317	1/18/17	4/17/17	Contig	Cornell University	SAMN05929611	GCA_001955625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/625/GCA_001955625.1_ASM195562v1	-	FSL H7-0596
Ensifer aridi	1708715	PRJNA312299	312299	Proteobacteria	Alphaproteobacteria	6.60981	61.7	-	LUAV01	79	6242	5883	4/4/17	4/5/17	Scaffold	IRD	SAMN04455909	GCA_002078505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/505/GCA_002078505.1_ASM207850v1	28088165	LMR001
Streptococcus azizii	1579424	PRJNA358417	358417	Terrabacteria group	Firmicutes	2.34084	42.8	-	MSPR01	47	2084	1917	2/4/17	4/17/17	Contig	Centers for Disease Control and Prevention	SAMN06174760	GCA_001984715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/715/GCA_001984715.1_ASM198471v1	-	Dec-02
Achromobacter insolitus	217204	PRJNA391536	391536	Proteobacteria	Betaproteobacteria	6.44444	65.1	-	NJIF01	29	5939	5814	6/27/17	6/29/17	Contig	Northwest A&F University	SAMN07270367	GCA_002209555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/555/GCA_002209555.1_ASM220955v1	-	LMG 6003
Thiobacimonas profunda	1229727	PRJEB17191	351307	Proteobacteria	Alphaproteobacteria	5.16057	66.9	-	FOLR01	61	4909	4759	10/31/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444415	GCA_900112435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/435/GCA_900112435.1_IMG-taxon_2693429894_annotated_assembly	-	DSM 27508
Arcobacter porcinus	1935204	PRJNA282917	282917	Proteobacteria	delta/epsilon subdivisions	1.77887	27.1	-	LCSL01	12	1865	1809	7/26/16	4/13/17	Contig	Ghent University	SAMN03580808	GCA_001695235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/235/GCA_001695235.1_ASM169523v1	-	216
Klebsiella pneumoniae	573	PRJNA246471	246471	Proteobacteria	Gammaproteobacteria	5.37906	57.0898	chromosome:CP018676.1; chromosome unnamed:CP018673.1; plasmid pCAV1217-71:CP018674.1; plasmid pCAV1217-9294:CP018672.1; plasmid pKPC_CAV1217:CP018675.1	-	5	5746	5433	12/19/16	12/19/16	Complete Genome	University of Oxford	SAMN03024585	GCA_001908715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/715/GCA_001908715.1_ASM190871v1	-	CAV1217
Leucobacter musarum subsp. japonicus	1461259	PRJNA240071	240071	Terrabacteria group	Actinobacteria	3.58887	66.8	-	JHBX01	144	3275	3188	8/25/15	4/11/17	Contig	University of Oxford	SAMN02673066	GCA_001273855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/855/GCA_001273855.1_CBX130_1.1	26275616	CBX130
Pseudomonas saudimassiliensis	1461581	PRJEB5504	244986	Proteobacteria	Gammaproteobacteria	3.34421	62.5	-	-	3	3120	3027	-	-	Scaffold	URMITE	SAMEA2659343	GCA_000945315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/315/GCA_000945315.1_PRJEB5504_assembly_1	-	12M76_air
Klebsiella pneumoniae	573	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	5.65627	57.0764	chromosome:NZ_CP021939.1/CP021939.1; plasmid tig00000209:NZ_CP021940.1/CP021940.1; plasmid tig00000217:NZ_CP021941.1/CP021941.1; plasmid tig00000218j2847_linear:NZ_CP021942.1/CP021942.1; plasmid tig00000219:NZ_CP021943.1/CP021943.1	-	5	5659	5410	6/20/17	6/22/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014986	GCA_002202215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/215/GCA_002202215.1_ASM220221v1	-	AR_0145
Gramella flava JLT2011	1229726	PRJNA175612	175612	FCB group	Bacteroidetes/Chlorobi group	3.97716	42.1	-	AMRU01	42	3555	3459	5/1/17	5/22/17	Contig	"State Key Laboratory for Marine Environmental Science, Xiamen University, Xiamen, FuJian 361005, P.R. China"	SAMN06840051	GCA_002120265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/265/GCA_002120265.1_ASM212026v1	24048873	JLT2011
Klebsiella variicola	244366	PRJNA327903	327903	Proteobacteria	Gammaproteobacteria	5.92703	57.0752	chromosome:NZ_CP017849.1/CP017849.1; plasmid pKPGJ-2a:NZ_CP017850.1/CP017850.1; plasmid pKPGJ-2b:NZ_CP017851.1/CP017851.1; plasmid pKPGJ-2c:NZ_CP017852.1/CP017852.1; plasmid pKPGJ-2d:NZ_CP017853.1/CP017853.1	-	5	5959	5656	2/7/17	2/22/17	Complete Genome	Gwangju Institute of Science and Technology	SAMN05361854	GCA_001989515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/515/GCA_001989515.1_ASM198951v1	-	GJ2
Sphaerochaeta sp. Phil3	1930011	PRJNA357304	357304	Spirochaetes	Spirochaetia	2.35653	48.1	-	MSGT01	72	-	-	1/10/17	1/10/17	Scaffold	University of Queensland	SAMN06140809	GCA_001940825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/825/GCA_001940825.1_ASM194082v1	-	-
Neptunomonas phycophila	1572645	PRJNA356211	356211	Proteobacteria	Gammaproteobacteria	3.99904	45.3	-	MRCJ01	285	3612	3515	12/28/16	4/16/17	Contig	University of Santiago de Compostela	SAMN06109310	GCA_001922565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/565/GCA_001922565.1_ASM192256v1	-	3CM2.5
Klebsiella variicola	244366	PRJNA259590	259590	Proteobacteria	Gammaproteobacteria	5.71843	57.072	chromosome:NZ_CP009274.2/CP009274.2; plasmid pKV1:NZ_CP009275.1/CP009275.1; plasmid pKV2:NZ_CP009276.1/CP009276.1	-	3	5675	5425	12/31/14	2/21/17	Complete Genome	Zhejiang University	SAMN03018135	GCA_000812205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/205/GCA_000812205.2_ASM81220v2	26203334	DX120E
Vibrio panuliri	1381081	PRJNA343920	343920	Proteobacteria	Gammaproteobacteria	4.79957	45.1	-	MJMH01	250	4369	4216	1/9/17	4/16/17	Contig	"CIAD, A.C."	SAMN05804969	GCA_001939755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/755/GCA_001939755.1_ASM193975v1	-	CAIM 1902
Ktedonobacter sp. 13_2_20CM_2_54_8	1805234	PRJNA297196	297196	Terrabacteria group	Chloroflexi	2.02357	53.8	-	MNDO01	667	1911	1496	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327901	GCA_001914965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/965/GCA_001914965.1_ASM191496v1	27843720	-
Moraxella cuniculi	34061	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.29726	44.3	-	MUYC01	60	2227	2118	3/3/17	3/6/17	Scaffold	TAILORED-Treatment project	SAMN06308730	GCA_002015175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/175/GCA_002015175.1_ASM201517v1	-	CCUG 2154
Streptococcus acidominimus	1326	PRJNA358417	358417	Terrabacteria group	Firmicutes	2.28509	42.6	-	MSJL01	111	2096	1924	12/24/16	7/24/17	Contig	Centers for Disease Control and Prevention	SAMN06174759	GCA_001921825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/921/825/GCA_001921825.1_ASM192182v1	-	CCUG 27296
Mycobacterium diernhoferi	1801	PRJNA338014	338014	Terrabacteria group	Actinobacteria	5.92084	67.8	-	MIJD01	684	6091	5244	3/10/17	3/15/17	Scaffold	UW	SAMN05729958	GCA_002024975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/975/GCA_002024975.1_ASM202497v1	-	BM1
Glutamicibacter sp. BW78	2024403	PRJNA387187	387187	Terrabacteria group	Actinobacteria	3.41948	64	-	NRGU01	43	3189	3080	9/21/17	9/23/17	Scaffold	"Dutton Lab, UCSD"	SAMN07141166	GCA_002332245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/245/GCA_002332245.1_ASM233224v1	28644126	BW78
Caedibacter sp. 37-49	1895735	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	1.83274	36.6	-	MKUV01	78	1725	1635	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660590	GCA_001898725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/725/GCA_001898725.1_ASM189872v1	-	-
Flavobacterium frigidimaris	262320	PRJEB18211	355495	FCB group	Bacteroidetes/Chlorobi group	5.73918	34.7	-	FQWG01	54	4958	4819	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444481	GCA_900129595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/595/GCA_900129595.1_IMG-taxon_2695420960_annotated_assembly	-	DSM 15937
Massiliomicrobiota timonensis	1776392	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.78438	31.4	-	NFLJ01	113	2855	2717	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473603	GCA_002160865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/865/GCA_002160865.1_ASM216086v1	-	An13
Candidatus Thiosymbion oneisti	589554	PRJEB14785	339807	Proteobacteria	Gammaproteobacteria	4.33206	58.8	-	FLUY01	1891	3789	3499	8/25/16	8/1/17	Contig	MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY	SAMEA4075898	GCA_900092655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/655/GCA_900092655.1_1385BSp362k77FG	-	-
Spirosoma sp. 48-14	1895854	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	8.67536	48.2	-	MKUD01	89	7196	6986	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660572	GCA_001898575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/575/GCA_001898575.1_ASM189857v1	-	-
Actinomyces denticolens	52767	PRJNA374619	374619	Terrabacteria group	Actinobacteria	2.83227	71.3	-	MVIW01	91	2399	2214	3/24/17	3/28/17	Scaffold	China CDC	SAMN06329630	GCA_002072185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/185/GCA_002072185.1_ASM207218v1	-	DSM 20671
Flavobacterium pectinovorum	29533	PRJEB18381	355778	FCB group	Bacteroidetes/Chlorobi group	5.61098	33.6	-	FRBX01	14	4689	4600	12/2/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444387	GCA_900142715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/715/GCA_900142715.1_IMG-taxon_2698536748_annotated_assembly	-	DSM 6368
Anaerotignum lactatifermentans	160404	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.30629	44.8	-	NFHM01	85	3334	3120	5/30/17	6/15/17	Contig	Veterinary Research Institute	SAMN06473754	GCA_002161375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/375/GCA_002161375.1_ASM216137v1	-	An75
Cnuella takakiae	1302690	PRJEB18175	355442	FCB group	Bacteroidetes/Chlorobi group	5.65936	50	-	FQUO01	34	4747	4631	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444008	GCA_900129015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/015/GCA_900129015.1_IMG-taxon_2695420933_annotated_assembly	-	DSM 26897
Porphyrobacter sanguineus	198312	PRJNA322640	322640	Proteobacteria	Alphaproteobacteria	3.01876	63.6	-	MUYH01	34	2874	2735	5/22/17	5/24/17	Scaffold	"Second Institute of Oceanography, State Oceanic Administration"	SAMN06251562	GCA_002155655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/655/GCA_002155655.1_ASM215565v1	-	JCM 20691
Microvirga massiliensis	1033741	PRJEA82707	82707	Proteobacteria	Alphaproteobacteria	9.04352	62.6	-	CAHM01	474	8662	8106	10/8/13	4/10/17	Contig	URMITE CNRS UMR 6236 IRD 198	SAMEA3146248	GCA_001050495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/495/GCA_001050495.1_ASM105049v1	-	-
Fibrobacter sp. UWB5	1964360	PRJNA376435	376435	FCB group	Fibrobacteres	3.36156	50.9	-	MWQH01	17	2754	2646	6/28/17	6/30/17	Contig	University of Wisconsin - Madison	SAMN06392820	GCA_002210295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/210/295/GCA_002210295.1_ASM221029v1	-	UWB5
Bifidobacterium lemurum	1603886	PRJNA376375	376375	Terrabacteria group	Actinobacteria	2.94429	62.6	-	MWWX01	38	2383	2231	8/18/17	8/21/17	Contig	University of Parma	SAMN06341149	GCA_002259665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/665/GCA_002259665.1_ASM225966v1	28764658	DSM 28807
Methanohalophilus portucalensis FDF-1	523843	PRJNA263421	263421	Euryarchaeota	Methanomicrobia	1.99045	42.1	-	JWTK01	15	2055	1974	12/2/16	4/17/17	Scaffold	National Chung Hsing University	SAMN03100365	GCA_001888095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/095/GCA_001888095.1_ASM188809v1	-	FDF-1
Pelobacter acetylenicus	29542	PRJNA319824	319824	Proteobacteria	delta/epsilon subdivisions	3.17636	57.4	chromosome:NZ_CP015518.1/CP015518.1	-	1	2927	2815	11/30/16	9/8/17	Chromosome	US Geological Survey	SAMN04909702	GCA_001887715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/715/GCA_001887715.1_ASM188771v1	-	DSM 3247
Bacillus andreraoultii	1499685	PRJEB9816	289229	Terrabacteria group	Firmicutes	4.11199	35.6	-	CWJM01	14	3832	3569	7/8/15	8/21/17	Scaffold	URMITE	SAMEA3479398	GCA_001244735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/735/GCA_001244735.1_Bacillus_andreraoultii	-	SIT1
Klebsiella pneumoniae	573	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	5.77432	57.0712	chromosome:NZ_CP021539.1/CP021539.1; plasmid tig00000001:NZ_CP021540.1/CP021540.1; plasmid tig00000002:NZ_CP021541.1/CP021541.1; plasmid tig00000003:NZ_CP021542.1/CP021542.1; plasmid tig00000004:NZ_CP021543.1/CP021543.1	-	5	5950	5669	6/8/17	6/10/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014888	GCA_002180075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/075/GCA_002180075.1_ASM218007v1	-	AR_0047
Bacteroides caecimuris	1796613	PRJNA289613	289613	FCB group	Bacteroidetes/Chlorobi group	4.80042	42.6	-	NHMU01	19	4098	3750	7/19/17	7/21/17	Contig	Max von Pettenkofer-Institut	SAMN03856106	GCA_002221665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/665/GCA_002221665.1_ASM222166v1	-	I48
Trichococcus pasteurii	43064	PRJEB12708	317996	Terrabacteria group	Firmicutes	3.23429	46.7	-	FWEY01	21	3105	2944	3/22/17	5/31/17	Scaffold	WAGENINGEN UNIVERSITY	SAMEA3869531	GCA_900079135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/135/GCA_900079135.1_ASM90007913v1	-	-
Enterococcus canintestini	317010	PRJNA292011	292011	Terrabacteria group	Firmicutes	2.73483	36.2	-	LHUG01	24	2607	2488	8/24/17	8/27/17	Scaffold	University of Alberta	SAMN03959821	GCA_002269685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/685/GCA_002269685.1_ASM226968v1	-	49
Palleronia marisminoris	315423	PRJEB17322	351509	Proteobacteria	Alphaproteobacteria	3.93725	66.2	-	FOPF01	27	3903	3727	10/31/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488020	GCA_900113405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/405/GCA_900113405.1_IMG-taxon_2615840708_annotated_assembly	-	DSM 26347
Marinilactibacillus piezotolerans	258723	PRJEB17417	351592	Terrabacteria group	Firmicutes	2.55469	35.5	-	FOSJ01	124	2470	2285	10/30/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488569	GCA_900114235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/235/GCA_900114235.1_IMG-taxon_2636415975_annotated_assembly	-	DSM 16108
Mucilaginibacter polytrichastri	1302689	PRJEB17532	351990	FCB group	Bacteroidetes/Chlorobi group	5.8157	42	-	FPAM01	37	5110	4960	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487890	GCA_900116355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/355/GCA_900116355.1_IMG-taxon_2622736518_annotated_assembly	-	DSM 26907
Rhizobium tibeticum	501024	PRJEB16918	351047	Proteobacteria	Alphaproteobacteria	7.06578	59.7	-	FOCV01	166	7063	6286	10/29/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216228	GCA_900110205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/205/GCA_900110205.1_IMG-taxon_2671180023_annotated_assembly	-	CGMCC 1.7071
Pseudomonas marincola	437900	PRJNA344571	344571	Proteobacteria	Gammaproteobacteria	5.22743	57.2	-	MLGD01	38	4989	4840	1/9/17	4/16/17	Contig	UNIVERSIDAD DE CHILE	SAMN05829226	GCA_001940335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/335/GCA_001940335.1_ASM194033v1	-	BMP1
Nannocystis exedens	54	PRJEB17233	351437	Proteobacteria	delta/epsilon subdivisions	11.6129	72.1	-	FOMX01	175	9255	9154	10/31/16	10/31/16	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745121	GCA_900112715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/715/GCA_900112715.1_IMG-taxon_2597490371_annotated_assembly	-	ATCC 25963
[Collinsella] massiliensis	1232426	PRJNA377666	377666	Terrabacteria group	Actinobacteria	2.29857	66	-	NFIE01	45	1995	1887	5/30/17	8/15/17	Contig	Veterinary Research Institute	SAMN06473730	GCA_002161605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/605/GCA_002161605.1_ASM216160v1	-	An5
Pseudomonas pachastrellae	254161	PRJNA363020	363020	Proteobacteria	Gammaproteobacteria	3.92046	61.2	-	MUBC01	119	3691	3527	2/6/17	4/17/17	Contig	University of Balearic Islands	SAMN06251744	GCA_001989375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/375/GCA_001989375.1_ASM198937v1	-	CCUG 46540
Trichococcus flocculiformis	82803	PRJEB17349	351562	Terrabacteria group	Firmicutes	2.97882	45.7	-	FOQC01	110	2918	2732	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488507	GCA_900113645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/645/GCA_900113645.1_IMG-taxon_2619618836_annotated_assembly	-	DSM 2094
Eubacterium callanderi	53442	PRJEB18374	355792	Terrabacteria group	Firmicutes	4.44889	47.2	-	FRBP01	28	4225	4096	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04515649	GCA_900142645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/645/GCA_900142645.1_IMG-taxon_2642422560_annotated_assembly	-	FD
Carnobacterium iners	1073423	PRJEB16867	351015	Terrabacteria group	Firmicutes	2.37633	34	-	FOAH01	79	2300	2102	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488114	GCA_900109585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/585/GCA_900109585.1_IMG-taxon_2622736582_annotated_assembly	-	DSM 28070
Trichococcus palustris	140314	PRJEB17449	351622	Terrabacteria group	Firmicutes	2.93114	45.6	-	FOTD01	52	2758	2625	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488076	GCA_900114465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/465/GCA_900114465.1_IMG-taxon_2619618822_annotated_assembly	-	DSM 9172
Muricauda antarctica	1055723	PRJEB17181	351358	FCB group	Bacteroidetes/Chlorobi group	4.48283	45.2	-	FOKU01	22	4062	3957	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487891	GCA_900112295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/295/GCA_900112295.1_IMG-taxon_2619619048_annotated_assembly	-	DSM 26351
Klebsiella variicola	244366	PRJNA327903	327903	Proteobacteria	Gammaproteobacteria	5.93307	57.0705	chromosome:NZ_CP017289.1/CP017289.1; plasmid pKPGJ-3a:NZ_CP017285.1/CP017285.1; plasmid pKPGJ-3b:NZ_CP017286.1/CP017286.1; plasmid pKPGJ-3c:NZ_CP017287.1/CP017287.1; plasmid pKPGJ-3d:NZ_CP017288.1/CP017288.1	-	5	5966	5666	2/7/17	2/22/17	Complete Genome	Gwangju Institute of Science and Technology	SAMN05361855	GCA_001989535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/535/GCA_001989535.1_ASM198953v1	28087584	GJ3
Pseudomonas hussainii	1429083	PRJNA353167	353167	Proteobacteria	Gammaproteobacteria	3.64479	58.8	-	MPIO01	41	3402	3324	11/25/16	4/14/17	Contig	"Indian Institute of Science Education and Research, Bhopal"	SAMN06011245	GCA_001885685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/685/GCA_001885685.1_ASM188568v1	-	MB3
Nitrosovibrio sp. Nv17	1855339	PRJEB17764	353202	Proteobacteria	Betaproteobacteria	2.83719	63.3	-	FPIQ01	56	2645	2506	11/12/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216414	GCA_900119085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/085/GCA_900119085.1_IMG-taxon_2671180036_annotated_assembly	-	Nv17
Nitrosomonas marina	917	PRJEB17062	351146	Proteobacteria	Betaproteobacteria	3.4899	46.3	-	FOIA01	92	3176	3052	10/29/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216326	GCA_900111605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/605/GCA_900111605.1_IMG-taxon_2671180135_annotated_assembly	-	Nm71
Frateuria terrea	529704	PRJEB16779	350926	Proteobacteria	Gammaproteobacteria	3.84084	67.9	-	FNYC01	18	3474	3358	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487997	GCA_900109025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/025/GCA_900109025.1_IMG-taxon_2617270826_annotated_assembly	-	DSM 26515
Pseudooceanicola nitratireducens	517719	PRJEB16776	350929	Proteobacteria	Alphaproteobacteria	4.06349	64.2	-	FNZG01	32	3884	3773	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216183	GCA_900109195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/195/GCA_900109195.1_IMG-taxon_2663762743_annotated_assembly	-	CGMCC 1.7292
Pacificibacter marinus	658057	PRJEB19734	384754	Proteobacteria	Alphaproteobacteria	3.91465	52.1	-	FWFW01	43	3800	3685	4/28/17	5/6/17	Contig	UVEG	SAMEA102124168	GCA_900172305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/305/GCA_900172305.1_P.marinus_CECT7971_Spades_Prokka	-	CECT 7971
Niastella yeongjuensis	354355	PRJNA317194	317194	FCB group	Bacteroidetes/Chlorobi group	8.53238	44.5	-	LVXG01	82	6847	6708	4/3/17	4/5/17	Contig	Huzhong Agricultural University	SAMN04601196	GCA_002077935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/935/GCA_002077935.1_ASM207793v1	-	17621
Colwellia chukchiensis	641665	PRJEB16872	351011	Proteobacteria	Gammaproteobacteria	4.02367	41.9	-	FOBI01	52	3620	3468	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216262	GCA_900109795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/795/GCA_900109795.1_IMG-taxon_2667527443_annotated_assembly	-	CGMCC 1.9127
Salinicola sp. MH3R3-1	1928762	PRJNA357619	357619	Proteobacteria	Gammaproteobacteria	4.11074	62	-	MSDP01	136	3622	3504	1/5/17	4/16/17	Contig	University of Southern Mississippi	SAMN06145967	GCA_001937155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/155/GCA_001937155.1_ASM193715v1	-	MH3R3-1
Roseovarius nanhaiticus	573024	PRJEB16868	351024	Proteobacteria	Alphaproteobacteria	3.70603	63.2	-	FOAC01	15	3562	3475	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216208	GCA_900109765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/765/GCA_900109765.1_IMG-taxon_2667528179_annotated_assembly	-	CGMCC 1.10961
Rhizobium oryzae	464029	PRJEB20423	382906	Proteobacteria	Alphaproteobacteria	6.06525	62.7	-	FXAF01	11	5911	5670	4/19/17	4/26/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02982989	GCA_900177415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/415/GCA_900177415.1_IMG-taxon_2588254269_annotated_assembly	-	B4P
Roseivirga seohaensis subsp. aquiponti	1566026	PRJNA265145	265145	FCB group	Bacteroidetes/Chlorobi group	4.08341	39.2	-	JSVA01	51	3658	3568	8/17/15	4/11/17	Contig	"FACULTY OF BIOSCIENCES AND MEDICAL ENGINEERING, UNIVERSITI TEKNOLOGI MALAYSIA"	SAMN03145748	GCA_001267955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/955/GCA_001267955.1_ASM126795v1	-	D-25
Megamonas sp. Calf98-2	1855330	PRJEB16921	351036	Terrabacteria group	Firmicutes	2.21574	31.7	-	FOCY01	68	2204	2016	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216340	GCA_900110235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/235/GCA_900110235.1_IMG-taxon_2651870363_annotated_assembly	-	Calf98-2
Terribacillus saccharophilus	361277	PRJNA395369	395369	Terrabacteria group	Firmicutes	3.71255	42.9	-	NPBP01	86	3787	3690	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372689	GCA_002271915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/915/GCA_002271915.1_assembly-7521_v1	-	7521
Polaribacter vadi	1774273	PRJNA308246	308246	FCB group	Bacteroidetes/Chlorobi group	3.79888	29.6	-	LSFM01	28	3300	3238	7/7/16	4/13/17	Contig	Korea University	SAMN04390145	GCA_001680885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/885/GCA_001680885.1_ASM168088v1	-	LPB0003
Planococcus faecalis	1598147	PRJNA329464	329464	Terrabacteria group	Firmicutes	3.53477	40.8	-	MBMU01	67	3579	2676	10/28/16	4/13/17	Contig	University of Malaya	SAMN05413080	GCA_001856115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/115/GCA_001856115.1_ASM185611v1	-	CECT 8759
Trichococcus collinsii	157076	PRJEB16658	349905	Terrabacteria group	Firmicutes	3.17444	45.8	-	FNQH01	24	3079	2978	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488525	GCA_900107505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/505/GCA_900107505.1_IMG-taxon_2619618821_annotated_assembly	-	DSM 14526
Azotobacter beijerinckii	170623	PRJEB16809	350937	Proteobacteria	Gammaproteobacteria	5.08446	65.6	-	FNYO01	242	4889	4404	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04244579	GCA_900108965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/965/GCA_900108965.1_IMG-taxon_2597490342_annotated_assembly	-	DSM 1041
Tyzzerella sp. Marseille-P3062	1870993	PRJEB16356	349286	Terrabacteria group	Firmicutes	3.60126	40.2	-	FNWC01	7	3491	3318	10/27/16	4/13/17	Contig	URMITE	SAMEA4519291	GCA_900104635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/635/GCA_900104635.1_PRJEB16356	-	Marseille-P3062
Aequorivita viscosa	797419	PRJEB18305	355724	FCB group	Bacteroidetes/Chlorobi group	3.52689	36.6	-	FQYV01	65	3108	2950	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487908	GCA_900141955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/955/GCA_900141955.1_IMG-taxon_2622736533_annotated_assembly	-	DSM 26349
Methanohalophilus halophilus	2177	PRJEB16588	349872	Euryarchaeota	Methanomicrobia	2.02656	42.4	-	FNMU01	10	2079	1988	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04515625	GCA_900106905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/905/GCA_900106905.1_IMG-taxon_2642422606_annotated_assembly	-	Z-7982
Collimonas sp. OK242	1798195	PRJEB16604	349924	Proteobacteria	Betaproteobacteria	4.97828	57	-	FNOR01	56	4678	4499	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04515617	GCA_900107095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/095/GCA_900107095.1_IMG-taxon_2609459735_annotated_assembly	-	OK242
Bradyrhizobium erythrophlei	1437360	PRJEB18408	355833	Proteobacteria	Alphaproteobacteria	7.52522	61.2	chromosome I:NZ_LT670849.1/LT670849.1	-	1	7214	7027	12/3/16	4/16/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05444170	GCA_900142985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/985/GCA_900142985.1_IMG-taxon_2695420919_annotated_assembly	-	GAS401
Halopenitus persicus	1048396	PRJEB16621	349948	Euryarchaeota	Halobacteria	3.42449	65.5	-	FNPC01	27	3318	3122	10/22/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216564	GCA_900107205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/205/GCA_900107205.1_IMG-taxon_2654587885_annotated_assembly	-	"DC30,IBRC 10041,KCTC 4046"
Pseudomonas jessenii	77298	PRJEB16381	349315	Proteobacteria	Gammaproteobacteria	6.58845	59.7	-	FNTC01	2	6044	5815	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04490187	GCA_900104905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/905/GCA_900104905.1_IMG-taxon_2639762619_annotated_assembly	-	BS3660
Actinomyces nasicola	208480	PRJNA355617	355617	Terrabacteria group	Actinobacteria	2.63857	65.2	-	MQVR01	204	2552	2358	12/16/16	4/16/17	Scaffold	China CDC	SAMN06092712	GCA_001907295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/295/GCA_001907295.1_ASM190729v1	-	DSM 19116
Paraburkholderia caballeronis	416943	PRJEB16858	351033	Proteobacteria	Betaproteobacteria	7.06694	67	-	FOAJ01	42	6243	6009	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192542	GCA_900109675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/675/GCA_900109675.1_IMG-taxon_2651870119_annotated_assembly	-	LMG 26416
Nitrosomonas oligotropha	42354	PRJEB16938	351100	Proteobacteria	Betaproteobacteria	3.33855	48.4	-	FODO01	81	3143	2959	10/29/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216333	GCA_900110385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/385/GCA_900110385.1_IMG-taxon_2671180132_annotated_assembly	-	Nm76
Amycolatopsis pretoriensis	218821	PRJNA369760	369760	Terrabacteria group	Actinobacteria	10.1124	71.1	-	MUMK01	558	9832	9164	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06294977	GCA_002156025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/025/GCA_002156025.1_ASM215602v1	-	NRRL B-24133
Tessaracoccus flavus	1610493	PRJEB16599	349861	Terrabacteria group	Actinobacteria	3.19199	68	-	FNPU01	36	2919	2788	10/22/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428934	GCA_900107385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/385/GCA_900107385.1_IMG-taxon_2671180235_annotated_assembly	-	RP1
Pseudomonas cedrina subsp. cedrina	76762	PRJNA350775	350775	Proteobacteria	Gammaproteobacteria	6.51357	60.7	-	MNPW01	70	5986	5785	2/1/17	4/17/17	Contig	Technische Universitaet Muenchen	SAMN05945970	GCA_001983175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/175/GCA_001983175.1_ASM198317v1	-	DSM 17516
Pseudomonas costantinii	168469	PRJEB16477	349379	Proteobacteria	Gammaproteobacteria	6.71107	59.4	-	FNTS01	2	6190	5974	10/22/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04515675	GCA_900105935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/935/GCA_900105935.1_IMG-taxon_2645728113_annotated_assembly	-	BS2773
Brucella sp. 09RB8471	1149952	PRJNA347475	347475	Proteobacteria	Alphaproteobacteria	3.43475	57.0638	chromosome 1:NZ_CP019346.1/CP019346.1; chromosome 2:NZ_CP019347.1/CP019347.1	-	2	3447	3071	1/26/17	4/17/17	Complete Genome	Viginia Tech University	SAMN05890481	GCA_001971625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/625/GCA_001971625.1_ASM197162v1	-	09RB8471
Olsenella umbonata	604330	PRJEB17028	351202	Terrabacteria group	Actinobacteria	2.05796	63.2	-	FOGP01	13	1744	1656	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216446	GCA_900111255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/255/GCA_900111255.1_IMG-taxon_2660238784_annotated_assembly	-	KHGC19
Bradyrhizobium canariense	255045	PRJNA355288	355288	Proteobacteria	Alphaproteobacteria	8.29902	63	-	NAEX01	188	7855	7348	4/24/17	8/7/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN06067981	GCA_002108675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/675/GCA_002108675.1_ASM210867v1	28729275	UBMA050
Salinimicrobium catena	390640	PRJEB16666	349898	FCB group	Bacteroidetes/Chlorobi group	3.26317	43.8	-	FNUG01	26	3008	2921	10/22/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488034	GCA_900107495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/495/GCA_900107495.1_IMG-taxon_2622736500_annotated_assembly	-	DSM 23553
Pseudomonas delhiensis	366289	PRJEB15961	348298	Proteobacteria	Gammaproteobacteria	6.71057	68.1	-	FNEC01	101	5945	5770	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216189	GCA_900099945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/945/GCA_900099945.1_IMG-taxon_2671180033_annotated_assembly	-	CCM 7361
Prauserella marina	530584	PRJEB15695	347442	Terrabacteria group	Actinobacteria	6.98095	67.6	-	FMZE01	22	6549	6371	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421630	GCA_900102755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/755/GCA_900102755.1_IMG-taxon_2675903049_annotated_assembly	-	CGMCC 4.5506
Alloactinosynnema album	504798	PRJEB16263	348873	Terrabacteria group	Actinobacteria	7.269	69.7	-	FNJB01	34	6575	6356	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192558	GCA_900104505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/505/GCA_900104505.1_IMG-taxon_2651870121_annotated_assembly	-	IBRC-M 10655
Pseudomonas reinekei	395598	PRJNA359931	359931	Proteobacteria	Gammaproteobacteria	6.24957	59.2	-	MSTQ01	63	5763	5537	1/11/17	4/16/17	Contig	Universidad Andres Bello	SAMN06198581	GCA_001945365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/365/GCA_001945365.1_ASM194536v1	-	MT1
Sporomusa acidovorans DSM 3132	1123286	PRJNA310710	310710	Terrabacteria group	Firmicutes	6.06062	44.6	-	LSLL01	176	5790	5435	8/17/17	8/19/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04455122	GCA_002257695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/695/GCA_002257695.1_ASM225769v1	-	DSM 3132
Yangia pacifica	311180	PRJEB15890	347955	Proteobacteria	Alphaproteobacteria	6.14213	66.3	-	FNCL01	47	5764	5610	10/20/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488245	GCA_900100725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/725/GCA_900100725.1_IMG-taxon_2617270881_annotated_assembly	-	CGMCC 1.3455
Halanaerobium congolense	54121	PRJEB15970	348290	Terrabacteria group	Firmicutes	2.92051	33	-	FNEH01	56	2822	2644	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04515654	GCA_900100055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/055/GCA_900100055.1_IMG-taxon_2642422585_annotated_assembly	-	WG7
Succiniclasticum ruminis	40841	PRJEB15743	347674	Terrabacteria group	Firmicutes	2.90047	49.1	-	FMYW01	27	2487	2372	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487864	GCA_900101645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/645/GCA_900101645.1_IMG-taxon_2623620478_annotated_assembly	-	DSM 11005
Eubacterium pyruvativorans	155865	PRJEB17584	351953	Terrabacteria group	Firmicutes	2.27708	54.4	-	FPBT01	72	2075	1912	11/2/16	8/3/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216508	GCA_900116785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/785/GCA_900116785.1_IMG-taxon_2657244902_annotated_assembly	-	KHGC13
Actinomyces ruminicola	332524	PRJEB16240	348970	Terrabacteria group	Actinobacteria	3.10356	69.9	-	FNIM01	39	2581	2452	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216355	GCA_900103885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/885/GCA_900103885.1_IMG-taxon_2651870319_annotated_assembly	-	DSM 27982
Pseudomonas gessardii	78544	PRJEB16048	348482	Proteobacteria	Gammaproteobacteria	6.69563	60.3	-	FNKR01	3	6133	5818	10/20/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04490207	GCA_900101185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/185/GCA_900101185.1_IMG-taxon_2636416191_annotated_assembly	-	BS2982
Terribacillus halophilus	361279	PRJEB15718	347658	Terrabacteria group	Firmicutes	3.65441	44.5	-	FMZB01	25	3711	3605	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421663	GCA_900101385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/385/GCA_900101385.1_IMG-taxon_2675903149_annotated_assembly	-	DSM 21620
Belnapia rosea	938405	PRJEB15757	347671	Proteobacteria	Alphaproteobacteria	5.99414	69.8	-	FMZX01	119	5653	5380	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487779	GCA_900101615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/615/GCA_900101615.1_IMG-taxon_2623620456_annotated_assembly	-	CPCC 100156
Algoriphagus faecimaris	686796	PRJNA359512	359512	FCB group	Bacteroidetes/Chlorobi group	4.6793	41.4	-	MSSX01	134	4120	4019	5/19/17	6/15/17	Contig	Shandong Uniwersity at Weihai	SAMN06192699	GCA_002150585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/585/GCA_002150585.1_ASM215058v1	-	JCM 16561
Muricauda zhangzhouensis	1073328	PRJEB16578	349882	FCB group	Bacteroidetes/Chlorobi group	3.74401	39.9	-	FNMY01	10	3371	3297	10/22/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487892	GCA_900106825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/825/GCA_900106825.1_IMG-taxon_2617270731_annotated_assembly	-	DSM 25030
Paraburkholderia phenazinium	60549	PRJEB18394	355730	Proteobacteria	Betaproteobacteria	8.52694	62.8	-	FSRU01	3	7516	7312	12/14/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444165	GCA_900142845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/845/GCA_900142845.1_IMG-taxon_2695420309_annotated_assembly	-	GAS95
Pseudobutyrivibrio xylanivorans DSM 14809	1123012	PRJEB18292	355697	Terrabacteria group	Firmicutes	3.42092	38.7	-	FQYQ01	57	3142	3010	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745725	GCA_900141825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/825/GCA_900141825.1_IMG-taxon_2585428087_annotated_assembly	-	DSM 14809
Bradyrhizobium ottawaense	931866	PRJNA397101	397101	Proteobacteria	Alphaproteobacteria	8.6771	63.8	-	NPNY01	150	8295	7709	8/30/17	9/1/17	Contig	Ottawa Research and Development Center	SAMN07448707	GCA_002278135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/135/GCA_002278135.1_ASM227813v1	-	OO99
Basfia succiniciproducens	653940	PRJEB16990	351114	Proteobacteria	Gammaproteobacteria	2.32131	42.3	-	FOFH01	57	2227	2159	10/29/16	10/29/16	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910415	GCA_900110905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/905/GCA_900110905.1_IMG-taxon_2593339215_annotated_assembly	-	KPR-2
Eubacterium ruminantium	42322	PRJEB15973	348287	Terrabacteria group	Firmicutes	2.87899	37.3	-	FMTO01	36	2582	2474	10/14/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660484	GCA_900100105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/105/GCA_900100105.1_IMG-taxon_2593339210_annotated_assembly	-	HUN269
Klebsiella pneumoniae DMC1097	1284798	PRJNA187290	187290	Proteobacteria	Gammaproteobacteria	5.71069	57.0422	chromosome:NZ_CP011976.1/CP011976.1; plasmid pDMC1097-20.222kb:NZ_CP011979.1/CP011979.1; plasmid pDMC1097-218.836kb:NZ_CP011977.1/CP011977.1; plasmid pDMC1097-77.775kb:NZ_CP011978.1/CP011978.1	-	4	5822	5568	7/23/15	2/21/17	Complete Genome	JCVI	SAMN02141981	GCA_000417225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/225/GCA_000417225.2_ASM41722v2	24913165	DMC1097
Flavobacterium gilvum	1492737	PRJNA248342	248342	FCB group	Bacteroidetes/Chlorobi group	4.32199	35.1	-	JNCP01	215	3518	3403	7/28/14	4/9/17	Contig	"Chunlab, Inc."	SAMN02797832	GCA_000735535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/535/GCA_000735535.1_ASM73553v1	-	EM1308
Pseudomonas argentinensis	289370	PRJEB17378	351533	Proteobacteria	Gammaproteobacteria	5.10802	63.6	-	FORC01	15	4687	4570	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216602	GCA_900113905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/905/GCA_900113905.1_IMG-taxon_2671180085_annotated_assembly	-	LMG 22563
Mycobacterium franklinii	948102	PRJNA347845	347845	Terrabacteria group	Actinobacteria	5.02363	64.2	-	MLIK01	28	4878	4753	10/26/16	4/13/17	Contig	University of Georgia	SAMN05897992	GCA_001853795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/795/GCA_001853795.1_ASM185379v1	-	1559
Flavobacterium spartansii	1278819	PRJNA354433	354433	FCB group	Bacteroidetes/Chlorobi group	5.3548	35.7	-	MUHG01	60	4440	4311	7/12/17	7/14/17	Scaffold	FDA	SAMN06049056	GCA_002217445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/445/GCA_002217445.1_ASM221744v1	-	ATCC BAA-2541
Pseudomonas punonensis	1220495	PRJEB18375	355793	Proteobacteria	Gammaproteobacteria	4.80964	61.8	-	FRBQ01	20	4485	4365	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216288	GCA_900142655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/655/GCA_900142655.1_IMG-taxon_2671180065_annotated_assembly	-	CECT 8089
Kytococcus sp. CUA-901	1517899	PRJNA344658	344658	Terrabacteria group	Actinobacteria	3.225	71.1	-	MKKB01	461	3090	2109	1/11/17	4/17/17	Scaffold	"Scripps Institution of Oceanography, UCSD"	SAMN05830210	GCA_001942245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/245/GCA_001942245.1_ASM194224v1	27902408	CUA-901
Hafnia sp. HMSC23F03	1581059	PRJNA269828	269828	Proteobacteria	Gammaproteobacteria	4.83026	48.2	-	LWPO01	63	4444	4284	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436207	GCA_001816025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/025/GCA_001816025.1_ASM181602v1	-	HMSC23F03
Halodesulfovibrio aestuarii DSM 17919 = ATCC 29578	1121444	PRJNA181377	181377	Proteobacteria	delta/epsilon subdivisions	3.54581	45.1	-	ARQF01	21	3232	3089	4/26/13	4/10/17	Contig	DOE Joint Genome Institute	SAMN02441308	GCA_000384815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/815/GCA_000384815.1_ASM38481v1	-	ATCC 29578
Sideroxydans sp. RIFOXYB12_FULL_59_6	1802155	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	1.03533	56.7	-	MIAE01	554	1169	698	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316175	GCA_001830495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/495/GCA_001830495.1_ASM183049v1	27774985	-
Turicella sp. HMSC076G08	1739310	PRJNA299960	299960	Terrabacteria group	Actinobacteria	2.74517	61.2	-	LTFX01	85	2588	2439	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477622	GCA_001811515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/515/GCA_001811515.1_ASM181151v1	-	HMSC076G08
Trueperella sp. HMSC08H06	1581142	PRJNA269911	269911	Terrabacteria group	Actinobacteria	1.97459	65.4	-	LWMY01	33	1793	1713	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03434395	GCA_001808465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/465/GCA_001808465.1_ASM180846v1	-	HMSC08H06
Salegentibacter salarius	435906	PRJEB19761	377463	FCB group	Bacteroidetes/Chlorobi group	3.32884	37	-	FVZF01	48	3078	2956	3/11/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660445	GCA_900168265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/265/GCA_900168265.1_IMG-taxon_2595698207_annotated_assembly	-	DSM 23401
Asinibacterium sp. OR53	925409	PRJNA82287	82287	FCB group	Bacteroidetes/Chlorobi group	3.71597	45.4	-	AZXP01	1	3249	3166	1/3/14	4/17/17	Scaffold	JGI	SAMN02597272	GCA_000515315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/315/GCA_000515315.1_ASM51531v1	-	OR53
Streptomyces qinglanensis	943816	PRJNA242488	242488	Terrabacteria group	Actinobacteria	6.61062	72.8	-	LJGV01	22	5563	5271	10/4/16	3/13/17	Scaffold	"Beijing Institute of Genomics, Chinese Academy of Sciences"	SAMN04026264	GCA_001751375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/375/GCA_001751375.1_ASM175137v1	27446038	SCSIO M10379
Streptomyces abyssalis	933944	PRJNA242488	242488	Terrabacteria group	Actinobacteria	6.6106	70.9	-	LJGT01	42	5700	5473	10/4/16	3/13/17	Scaffold	"Beijing Institute of Genomics, Chinese Academy of Sciences"	SAMN04026262	GCA_001751365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/365/GCA_001751365.1_ASM175136v1	27446038	SCSIO 10390
Candidatus Brocadia sp. UTAMX2	1961114	PRJNA343219	343219	PVC group	Planctomycetes	3.43734	45.1	-	MWTE01	148	3110	3008	3/20/17	4/11/17	Scaffold	University of Wisconsin - Madison	SAMN06342762	GCA_002050315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/315/GCA_002050315.1_ASM205031v1	-	-
Candidatus Portnoybacteria bacterium RBG_13_40_8	1801990	PRJNA288027	288027	unclassified Bacteria	Bacteria candidate phyla	0.623259	39.6	-	MHMU01	53	669	603	10/21/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315888	GCA_001821635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/821/635/GCA_001821635.1_ASM182163v1	27774985	-
Syntrophus sp. RIFOXYC2_FULL_54_9	1802292	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.85648	53.7	-	MICO01	532	3137	1927	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316182	GCA_001830855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/855/GCA_001830855.1_ASM183085v1	27774985	-
Oligella sp. HMSC09E12	1581147	PRJNA269916	269916	Proteobacteria	Betaproteobacteria	2.49676	46.1	-	LUAS01	105	2353	2226	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03433345	GCA_001808505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/505/GCA_001808505.1_ASM180850v1	-	HMSC09E12
Melioribacter sp. RIFOXYB12_FULL_38_5	1801613	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	1.49742	37.8	-	MHBS01	675	1468	993	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316176	GCA_001803365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/365/GCA_001803365.1_ASM180336v1	27774985	-
Fluviicola sp. RIFCSPHIGHO2_02_FULL_43_260	1798018	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.54024	42.8	-	MGWM01	6	3877	3822	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315484	GCA_001800985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/985/GCA_001800985.1_ASM180098v1	27774985	-
Pseudomonadales bacterium GWC2_63_15	1817754	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	3.66774	63.1	-	MHZI01	222	3562	3209	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314301	GCA_001830355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/355/GCA_001830355.1_ASM183035v1	27774985	-
Anaerolinea sp. 4484_236	1968532	PRJNA362212	362212	Terrabacteria group	Chloroflexi	1.95554	48.6	-	MZGP01	300	2017	1906	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06561765	GCA_002085065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/065/GCA_002085065.1_ASM208506v1	-	-
Wolbachia endosymbiont of Drosophila incompta	1633785	PRJNA279175	279175	Proteobacteria	Alphaproteobacteria	1.26766	36.4	chromosome:CP011149.1	-	1	1170	557	10/11/16	10/11/16	Chromosome	Universidade Federal do Pampa	SAMN03445735	GCA_001758585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/585/GCA_001758585.1_ASM175858v1	-	wInc_SM
Arenibacter sp. C-21	1883406	PRJDB5044	335882	FCB group	Bacteroidetes/Chlorobi group	5.66889	39.7	-	BDGL01	92	4758	4588	8/9/16	4/13/17	Scaffold	Chiba University	SAMD00056696	GCA_001748465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/465/GCA_001748465.1_ASM174846v1	-	C-21
Streptomyces agglomeratus	285458	PRJNA340068	340068	Terrabacteria group	Actinobacteria	8.96237	70.5053	plasmid pAM9P:NZ_CM007206.1/CM007206.1	MEHM01	6	8055	7387	9/26/16	3/13/17	Contig	Chinese Academy of Sciences	SAMN05631103	GCA_001746455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/455/GCA_001746455.1_ASM174645v1	-	9/3/15
Streptomyces nanshensis	518642	PRJNA242488	242488	Terrabacteria group	Actinobacteria	10.2716	70.9	-	LJGZ01	114	9143	7768	10/4/16	3/14/17	Scaffold	"Beijing Institute of Genomics, Chinese Academy of Sciences"	SAMN04026268	GCA_001751305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/305/GCA_001751305.1_ASM175130v1	27446038	SCSIO M10372
Cloacibacterium normanense	237258	PRJNA342010	342010	FCB group	Bacteroidetes/Chlorobi group	2.72735	33	-	MKGI01	82	2514	2447	9/28/16	4/13/17	Contig	The Jackson Laboratory	SAMN05731713	GCA_001747495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/495/GCA_001747495.1_ASM174749v1	-	NRS-1
Pseudorhizobium pelagicum	1509405	PRJNA252590	252590	Proteobacteria	Alphaproteobacteria	5.23928	62.4	-	JOKJ01	67	5124	4922	7/7/14	4/9/17	Contig	University Miguel Hernandez	SAMN02864220	GCA_000722625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/625/GCA_000722625.1_ASM72262v1	26078205	R2-400B4
Candidatus Endomicrobium trichonymphae	1408204	PRJNA304111	304111	Elusimicrobia	Endomicrobia	3.37386	35.8	-	LNVX01	866	3492	2869	9/19/16	9/19/16	Contig	Max Planck Institute for Terrestrial Mikrobiology	SAMN04295901	GCA_001730735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/735/GCA_001730735.1_ASM173073v1	-	CET450
Pseudomonas salomonii	191391	PRJEB16611	349957	Proteobacteria	Gammaproteobacteria	6.95438	59.9	-	FNOX01	39	6398	6183	10/22/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216247	GCA_900107155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/155/GCA_900107155.1_IMG-taxon_2663763605_annotated_assembly	-	ICMP 14252
Enterococcus quebecensis	903983	PRJNA270385	270385	Terrabacteria group	Firmicutes	3.15491	35.1	-	JXKZ01	76	2870	2771	11/25/16	4/16/17	Scaffold	Inner Mongolia Agricultural University	SAMN03267182	GCA_001886145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/145/GCA_001886145.1_ASM188614v1	-	DSM 23327
Granulicella sp. SCN 62-9	1660100	PRJNA279279	279279	Acidobacteria	Acidobacteriia	1.05407	62	-	MEFW01	137	987	802	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652499	GCA_001725305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/305/GCA_001725305.1_ASM172530v1	26031303	-
Klebsiella pneumoniae	573	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	5.74613	57.0418	chromosome:NZ_CP021685.1/CP021685.1; plasmid tig00001160:NZ_CP021686.1/CP021686.1; plasmid tig00001186:NZ_CP021687.1/CP021687.1; plasmid tig00001189:NZ_CP021688.1/CP021688.1	-	4	5831	5536	6/8/17	6/10/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014987	GCA_002180175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/175/GCA_002180175.1_ASM218017v1	-	AR_0146
Enterococcus termitis	332950	PRJNA270385	270385	Terrabacteria group	Firmicutes	4.12749	36.9	-	JXLF01	102	3917	3813	11/25/16	4/16/17	Scaffold	Inner Mongolia Agricultural University	SAMN03267188	GCA_001886275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/275/GCA_001886275.1_ASM188627v1	-	DSM 22803
Rubrivivax sp. SCN 70-15	1660139	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	4.02762	70.4	-	MEGM01	267	3942	3508	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652516	GCA_001725505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/505/GCA_001725505.1_ASM172550v1	26031303	-
Mycobacterium shimoidei	29313	PRJNA338014	338014	Terrabacteria group	Actinobacteria	4.72074	65.8	-	MIHE01	81	4531	4350	9/9/16	4/17/17	Contig	UW	SAMN05729965	GCA_001722445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/445/GCA_001722445.1_ASM172244v1	-	HMC_M2
Paludibacter sp. SCN 50-10	1660155	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	1.33114	50.2	-	MEER01	123	1030	898	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652467	GCA_001724935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/935/GCA_001724935.1_ASM172493v1	26031303	-
Methanosphaera sp. WGK6	1561964	PRJNA263968	263968	Euryarchaeota	Methanobacteria	1.72915	27.7	-	JRWK01	37	1623	1550	9/16/16	4/17/17	Contig	University of Queensland	SAMN03108761	GCA_001729965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/965/GCA_001729965.1_ASM172996v1	27022996	WGK6
Thiobacillus sp. SCN 63-374	1660149	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	3.27439	63.2	-	MEFK01	291	3294	2750	9/13/16	9/13/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03652487	GCA_001725135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/135/GCA_001725135.1_ASM172513v1	26031303	-
Pelagibacterium sp. SCN 63-126	1660123	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	4.04306	62.7	-	MEET01	16	3891	3802	9/13/16	9/13/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03652469	GCA_001724555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/555/GCA_001724555.1_ASM172455v1	26031303	-
Lautropia sp. SCN 70-15	1660105	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	2.71649	69.9	-	MEEC01	272	2775	2460	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652448	GCA_001724315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/315/GCA_001724315.1_ASM172431v1	26031303	-
Pantoea conspicua	472705	PRJNA319366	319366	Proteobacteria	Gammaproteobacteria	5.12279	55.7	-	MIZY01	276	4893	4628	9/24/16	4/17/17	Scaffold	"Jet Propulsion Laboratory, California Institute of Technology"	SAMN04902363	GCA_001743465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/743/465/GCA_001743465.1_ASM174346v1	-	IF5SW-P1
Candidatus Marithrix sp. Canyon 246	1827136	PRJNA322859	322859	Proteobacteria	Gammaproteobacteria	3.20997	34	-	MCBV01	63	3267	3085	9/13/16	4/13/17	Contig	Max Planck Institute for Marine Microbiology	SAMN05176298	GCA_001723675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/675/GCA_001723675.1_ASM172367v1	27536274	-
Mycobacterium porcinum	39693	PRJNA354248	354248	Terrabacteria group	Actinobacteria	6.96067	66.7	-	MVIG01	102	6667	6496	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064256	GCA_002086835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/835/GCA_002086835.1_ASM208683v1	-	IP141460001
Mycobacterium triviale	1798	PRJNA338014	338014	Terrabacteria group	Actinobacteria	3.87323	69.1	-	MIHD01	138	3642	3504	9/9/16	4/17/17	Contig	UW	SAMN05729963	GCA_001722415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/415/GCA_001722415.1_ASM172241v1	-	HMC_M3
Mycobacterium sherrisii	243061	PRJNA338014	338014	Terrabacteria group	Actinobacteria	5.68682	66.9	-	MIHC01	163	5363	5051	9/9/16	4/17/17	Scaffold	UW	SAMN05729962	GCA_001722325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/325/GCA_001722325.1_ASM172232v1	-	BC1_M4
Candidatus Methanomethylicus mesodigestum	1867258	PRJNA321438	321438	TACK group	Candidatus Verstraetearchaeota	1.63722	57.6	-	MAGT01	11	-	-	8/30/16	10/11/16	Scaffold	University of Queensland	SAMN04994459	GCA_001717035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/035/GCA_001717035.1_ASM171703v1	27694807	-
Streptomyces rubidus	310780	PRJNA293375	293375	Terrabacteria group	Actinobacteria	8.08148	72.5	-	MDCQ01	1885	7416	6265	9/11/16	3/13/17	Scaffold	USDA/ARS/NCAUR	SAMN05552974	GCA_001723065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/065/GCA_001723065.1_ASM172306v1	-	NRRL B-24619
Mycobacterium intermedium	28445	PRJNA338014	338014	Terrabacteria group	Actinobacteria	6.8751	65.4	-	MIJC01	381	6149	5674	3/10/17	3/15/17	Contig	UW	SAMN05729955	GCA_002024965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/965/GCA_002024965.1_ASM202496v1	-	HMC1
Eisenbergiella tayi	1432052	PRJNA335591	335591	Terrabacteria group	Firmicutes	8.32182	46.9	-	MEHA01	90	7546	7260	9/9/16	4/5/17	Contig	Public Health Agency of Canada	SAMN05449644	GCA_001722555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/555/GCA_001722555.1_ASM172255v1	-	NML150140-1
Candidatus Methanosuratus petracarbonis	1867261	PRJNA321438	321438	TACK group	Candidatus Verstraetearchaeota	0.735081	53.2	-	MAGW01	295	-	-	8/30/16	10/11/16	Scaffold	University of Queensland	SAMN04994464	GCA_001717085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/085/GCA_001717085.1_ASM171708v1	27694807	-
Bacillus luciferensis	178774	PRJNA381928	381928	Terrabacteria group	Firmicutes	4.4268	32.8	-	NCTA01	90	4354	4195	5/23/17	6/16/17	Contig	Lycoming College	SAMN06693592	GCA_002156865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/865/GCA_002156865.1_ASM215686v1	-	DSM 18845
Pedobacter steynii	430522	PRJEB16177	348942	FCB group	Bacteroidetes/Chlorobi group	8.0607	41.8	-	FNGY01	41	6619	6489	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421820	GCA_900103665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/665/GCA_900103665.1_IMG-taxon_2675903693_annotated_assembly	-	DSM 19110
Jiangella alba	561176	PRJEB16498	349418	Terrabacteria group	Actinobacteria	7.68189	72.8	-	FNUC01	4	6909	6740	10/22/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488561	GCA_900106035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/035/GCA_900106035.1_IMG-taxon_2630968302_annotated_assembly	-	DSM 45237
Candidatus Thiodiazotropha endoloripes	1818881	PRJNA314435	314435	Proteobacteria	Gammaproteobacteria	4.4665	52.1	-	LVJY01	12	4017	3926	8/23/16	4/13/17	Scaffold	University of Vienna	SAMN04574143	GCA_001708955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/955/GCA_001708955.1_ASM170895v1	27775707	-
Mameliella alba	561184	PRJNA265019	265019	Proteobacteria	Alphaproteobacteria	5.83738	65	-	JSUQ01	62	5707	5499	12/23/14	4/10/17	Contig	Monash University Malaysia	SAMN03145050	GCA_000807715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/715/GCA_000807715.1_ASM80771v1	-	UMTAT08
Pseudomonas graminis	158627	PRJNA362581	362581	Proteobacteria	Gammaproteobacteria	5.68679	59.1	-	MTSB01	42	5172	4905	4/14/17	4/24/17	Contig	UCA	SAMN06242168	GCA_002093745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/745/GCA_002093745.1_ASM209374v1	-	PDD-13b-3
Paenibacillus kribbensis	172713	PRJNA326714	326714	Terrabacteria group	Firmicutes	6.15001	46.3	-	MCBP01	58	5594	5284	8/15/16	4/17/17	Contig	Hebei University	SAMN05291436	GCA_001705305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/305/GCA_001705305.1_ASM170530v1	-	6hRe76
Flavobacterium piscis	1114874	PRJNA354433	354433	FCB group	Bacteroidetes/Chlorobi group	5.88021	34.1	-	MUHC01	105	5002	4858	7/20/17	7/22/17	Scaffold	FDA	SAMN06049066	GCA_002222045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/222/045/GCA_002222045.1_ASM222204v1	-	CCUG 60099
Desulfobacca sp. RBG_16_60_12	1797909	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.99685	58.3	-	MGTH01	244	2978	2172	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314260	GCA_001799355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/355/GCA_001799355.1_ASM179935v1	27774985	-
Thermodesulfovibrio sp. RBG_19FT_COMBO_41_18	1802372	PRJNA288027	288027	Nitrospirae	Nitrospira	0.852988	39.4	-	MIDH01	118	933	679	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314148	GCA_001830135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/135/GCA_001830135.1_ASM183013v1	27774985	-
Flavonifractor sp. An91	1965665	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.60399	57.6	-	NFHA01	110	3508	3299	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473770	GCA_002159225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/225/GCA_002159225.1_ASM215922v1	-	An91
Lachnospira sp. UBA2803	1946711	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.05053	33.9	-	DEHJ01	65	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06450906	GCA_002351885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/351/885/GCA_002351885.1_ASM235188v1	28894102	-
Bacillus wiedmannii	1890302	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.64149	35.3	-	LOBB01	158	5990	5688	3/9/16	4/5/17	Contig	Cornell University	SAMN03800020	GCA_001584035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/035/GCA_001584035.1_ASM158403v1	-	FSL K6-0069
Streptomyces sparsogenes DSM 40356	1331668	PRJNA201862	201862	Terrabacteria group	Actinobacteria	9.69968	72.2	-	ASQP01	646	8780	7792	1/23/17	3/15/17	Contig	Department of Chemistry - University of Basel	SAMN06251500	GCA_001969965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/965/GCA_001969965.1_Sparso1.0	-	DSM 40356
Haemophilus quentini	123834	PRJNA338788	338788	Proteobacteria	Gammaproteobacteria	2.12173	38.5	-	MDJB01	59	2178	1986	10/4/16	4/13/17	Contig	Public Health Ontario laborato	SAMN05570525	GCA_001752465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/465/GCA_001752465.1_ASM175246v1	-	K068
Streptomyces sampsonii	42239	PRJNA305966	305966	Terrabacteria group	Actinobacteria	7.2615	73.3	-	LORI01	9	6437	5828	11/3/16	3/14/17	Scaffold	Sichuan Agricultural University	SAMN04338613	GCA_001865315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/315/GCA_001865315.1_ASM186531v1	-	KJ40
Gilliamella sp. A-4-12	1970462	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.62624	34.7	-	NASK01	104	2413	2323	5/16/17	5/23/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603527	GCA_002141865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/865/GCA_002141865.1_ASM214186v1	-	A-4-12
Kosakonia oryzendophytica	1005665	PRJEB15027	336293	Proteobacteria	Gammaproteobacteria	4.84153	53.7	-	FMAY01	32	4634	4447	8/3/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487791	GCA_900094925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/925/GCA_900094925.1_IMG-taxon_2617270737_annotated_assembly	-	REICA_082
Akkermansia glycaniphila	1679444	PRJNA288964	288964	PVC group	Verrucomicrobia	3.15785	57.7	-	LIGX01	41	2646	2551	7/12/16	4/13/17	Scaffold	Wageningen UR	SAMN03840437	GCA_001683795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/795/GCA_001683795.1_ASM168379v1	-	Pyt
Rhizobium favelukesii	348824	PRJNA165297	165297	Proteobacteria	Alphaproteobacteria	7.36816	59.7	-	ATTO01	240	7440	6529	7/9/13	4/11/17	Contig	DOE Joint Genome Institute	SAMN02440560	GCA_000419725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/725/GCA_000419725.1_ASM41972v1	-	OR191
Klebsiella pneumoniae	573	PRJNA319426	319426	Proteobacteria	Gammaproteobacteria	5.88091	57.0263	chromosome:NZ_CP015385.1/CP015385.1; plasmid NY9_p1:NZ_CP015386.1/CP015386.1; plasmid NY9_p2:NZ_CP015387.1/CP015387.1; plasmid NY9_p3:NZ_CP015388.1/CP015388.1; plasmid NY9_p4:NZ_CP015389.1/CP015389.1; plasmid NY9_p5:NZ_CP015390.1/CP015390.1; plasmid NY9_p6:NZ_CP015391.1/CP015391.1	-	7	6065	5738	1/17/17	2/22/17	Complete Genome	New York Medical College	SAMN04889856	GCA_001952895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/895/GCA_001952895.1_ASM195289v1	-	NY9
Limnothrix sp. P13C2	1880902	PRJNA330622	330622	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.58381	55.3	-	MBRF01	33	3785	3672	8/3/16	8/3/16	Scaffold	Singapore-MIT Alliance for Research and Technology	SAMN05417939	GCA_001698445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/445/GCA_001698445.1_ASM169844v1	-	-
Xanthomonas cannabis pv. cannabis	1885894	PRJNA266578	266578	Proteobacteria	Gammaproteobacteria	4.75673	65.8	-	JSZE01	257	4203	3830	12/16/14	4/6/17	Contig	Institut de Recherche pour le Developpement	SAMN03164131	GCA_000802365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/365/GCA_000802365.1_NCPPB2877_E1.0	26136759	NCPPB 2877
Vibrio celticus	446372	PRJEB14354	329207	Proteobacteria	Gammaproteobacteria	5.39239	44.4	-	FLQZ01	196	4791	4422	7/16/16	4/17/17	Scaffold	UVEG	SAMEA4029005	GCA_900089965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/965/GCA_900089965.1_VcelticusCECT7224_Velvet_Prokka	-	CECT 7224
Vibrio cidicii	1763883	PRJNA304180	304180	Proteobacteria	Gammaproteobacteria	4.66504	48.2	-	LOBQ01	113	4317	4148	3/25/16	4/12/17	Contig	University of Alberta	SAMN04296643	GCA_001597945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/945/GCA_001597945.1_ASM159794v1	-	2423-01
Stappia indica	538381	PRJNA328867	328867	Proteobacteria	Alphaproteobacteria	4.82623	67	-	MBQF01	45	4349	4259	7/29/16	7/11/17	Contig	National University of Colombia	SAMN05382895	GCA_001696545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/545/GCA_001696545.1_ASM169654v1	-	EBBD 17.2
Pantoea eucrina	472693	PRJNA327384	327384	Proteobacteria	Gammaproteobacteria	3.93988	56	-	MAYN01	8	3749	3606	7/21/16	4/17/17	Scaffold	Oklahoma State University	SAMN05332127	GCA_001691555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/555/GCA_001691555.1_ASM169155v1	-	Russ
Aliivibrio sp. 1S165	1840086	PRJNA318805	318805	Proteobacteria	Gammaproteobacteria	4.31741	38.7	-	MAJT01	90	3885	3745	7/21/16	4/13/17	Scaffold	Massachusetts Institute of Technology	SAMN04867932	GCA_001691025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/025/GCA_001691025.1_ASM169102v1	-	1S165
Ruminiclostridium sp. UBA1305	1947398	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.80464	43.3	-	DBTX01	95	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06451771	GCA_002307275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/275/GCA_002307275.1_ASM230727v1	28894102	-
Candidatus Erwinia dacicola	252393	PRJNA326914	326914	Proteobacteria	Gammaproteobacteria	2.13238	53.5	-	MAZB01	333	-	-	7/20/16	7/20/16	Contig	University of Liverpool	SAMN05368316	GCA_001689725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/725/GCA_001689725.1_ASM168972v1	-	-
Lachnoclostridium sp. An298	1965627	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.16576	46.8	-	NFIS01	99	3081	2928	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473714	GCA_002159505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/505/GCA_002159505.1_ASM215950v1	-	An298
Yangia sp. SAOS 153D	1779329	PRJNA401250	401250	Proteobacteria	Alphaproteobacteria	4.89783	66.4	-	NTHN01	669	4972	4188	9/13/17	9/15/17	Contig	CSIR-Institute of Microbial Technology	SAMN07599955	GCA_002300555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/555/GCA_002300555.1_ASM230055v1	-	SAOS 153D
Flavobacterium glycines	551990	PRJEB15983	348278	FCB group	Bacteroidetes/Chlorobi group	3.94543	34.1	-	FNEO01	14	3260	3180	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192550	GCA_900100165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/165/GCA_900100165.1_IMG-taxon_2660237900_annotated_assembly	-	Gm-149
Marinomonas spartinae	1792290	PRJEB14352	329209	Proteobacteria	Gammaproteobacteria	4.70573	43.9	-	FLOE01	43	4391	4194	7/16/16	4/13/17	Scaffold	UVEG	SAMEA4029003	GCA_900089745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/745/GCA_900089745.1_MspartinaeCECT8887_Velvet_Prokka	-	CECT 8887
Mycobacterium malmoense	1780	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.80766	68.8	-	MBEA01	282	5588	5210	7/15/16	4/13/17	Contig	JCVI	SAMN04634212	GCA_001686665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/665/GCA_001686665.1_ASM168666v1	-	E614
Klebsiella pneumoniae	573	PRJNA343398	343398	Proteobacteria	Gammaproteobacteria	5.75921	57.0259	chromosome:NZ_CP017385.1/CP017385.1; plasmid 1:NZ_CP017386.1/CP017386.1; plasmid 2:NZ_CP017387.1/CP017387.1; plasmid 3:NZ_CP017388.1/CP017388.1	-	4	5744	5423	10/3/16	2/21/17	Complete Genome	National Cheng Kung University	SAMN05786944	GCA_001750805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/805/GCA_001750805.1_ASM175080v1	-	KP36
Serinicoccus sp. CUA-874	1517939	PRJNA344658	344658	Terrabacteria group	Actinobacteria	3.52102	72.1	-	MKJZ01	39	3430	2834	1/11/17	4/17/17	Scaffold	"Scripps Institution of Oceanography, UCSD"	SAMN05830208	GCA_001942225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/225/GCA_001942225.1_ASM194222v1	27902408	CUA-874
Beijerinckia indica subsp. indica ATCC 9039	395963	PRJNA20841	20841	Proteobacteria	Alphaproteobacteria	4.41862	57.0207	chromosome:NC_010581.1/CP001016.1; plasmid pBIND01:NC_010580.1/CP001017.1; plasmid pBIND02:NC_010578.1/CP001018.1	-	3	4012	3848	4/11/08	5/18/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598441	GCA_000019845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/845/GCA_000019845.1_ASM1984v1	20601475	ATCC 9039
Polaribacter reichenbachii	996801	PRJNA308249	308249	FCB group	Bacteroidetes/Chlorobi group	4.10444	29.5	-	LSFL01	44	3506	3433	7/7/16	4/13/17	Contig	Korea University	SAMN04390149	GCA_001680875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/875/GCA_001680875.1_ASM168087v1	-	KCTC 23969
Mycobacterium kumamotonense	354243	PRJNA288076	288076	Terrabacteria group	Actinobacteria	5.33045	67.7	-	LFOE01	276	5178	4803	7/6/16	4/17/17	Scaffold	UCSF	SAMN03793173	GCA_001679965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/965/GCA_001679965.1_ASM167996v1	-	Roo
Moraxella nonliquefaciens	478	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.11254	42.4	-	LZDM01	45	1982	1853	7/5/16	4/13/17	Scaffold	TAILORED-Treatment project	SAMN05214002	GCA_001679125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/125/GCA_001679125.1_ASM167912v1	-	CCUG 47514
Chryseobacterium contaminans	1423959	PRJEB18371	355789	FCB group	Bacteroidetes/Chlorobi group	4.68784	35.8	-	FRBM01	24	4216	4087	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444407	GCA_900142615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/615/GCA_900142615.1_IMG-taxon_2700988701_annotated_assembly	-	DSM 27621
Gallibacterium salpingitidis	505341	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.63116	37.3	-	JTJT01	113	2524	2380	7/2/16	4/13/17	Contig	University of Copenhagen	SAMN03220412	GCA_001678545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/545/GCA_001678545.1_Gal32	-	19987/2 Salp
Mycobacterium scrofulaceum	1783	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.65091	68.4	-	LZJY01	486	5534	4979	6/17/16	4/13/17	Contig	JCVI	SAMN04634217	GCA_001672575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/575/GCA_001672575.1_ASM167257v1	-	E2838
Klebsiella pneumoniae	573	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	5.70811	57.0204	chromosome:NZ_CP021757.1/CP021757.1; plasmid tig00000001:NZ_CP021758.1/CP021758.1; plasmid tig00000002:NZ_CP021759.1/CP021759.1; plasmid tig00000003:NZ_CP021760.1/CP021760.1; plasmid tig00000004:NZ_CP021761.1/CP021761.1	-	5	5764	5482	6/13/17	6/15/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014979	GCA_002192375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/375/GCA_002192375.1_ASM219237v1	-	AR_0138
Acinetobacter lactucae	1785128	PRJNA309605	309605	Proteobacteria	Gammaproteobacteria	3.91621	38.6	-	LRPE01	39	3735	3591	4/4/16	4/6/17	Scaffold	NCAUR-ARS-USDA	SAMN04437545	GCA_001605885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/885/GCA_001605885.1_ASM160588v1	-	NRRL B-41902
Mycobacterium szulgai	1787	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.61808	66	-	LZHY01	54	5252	5066	6/17/16	4/12/17	Contig	JCVI	SAMN04634263	GCA_001667525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/525/GCA_001667525.1_ASM166752v1	-	ACS1160
Gallibacterium genomosp. 3	505345	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.24218	36.9	-	JTJM01	66	2060	1979	7/2/16	4/13/17	Contig	University of Copenhagen	SAMN03220398	GCA_001678485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/485/GCA_001678485.1_Gal25	-	F151
Paraburkholderia tropica	92647	PRJNA358147	358147	Proteobacteria	Betaproteobacteria	8.7488	64.7	-	MSDZ01	71	7697	7461	3/22/17	3/24/17	Scaffold	Embrapa Agrobiologia	SAMN06166932	GCA_002071575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/071/575/GCA_002071575.1_Ppe8	-	Ppe8
Romboutsia sp. CCRI-22766	2020948	PRJNA393817	393817	Terrabacteria group	Firmicutes	2.85435	27.1	-	NOJZ01	95	2821	2666	8/14/17	8/30/17	Contig	CHU de Quebec - Universite Laval	SAMN07342383	GCA_002251085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/085/GCA_002251085.1_ASM225108v1	-	CCRI-22766
Halomonas sinaiensis	379597	PRJEB18341	355737	Proteobacteria	Gammaproteobacteria	3.47875	63.6	-	FRAL01	23	3291	3188	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192556	GCA_900142315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/315/GCA_900142315.1_IMG-taxon_2654588149_annotated_assembly	-	ALO Sharm
[Propionibacterium] namnetense SK182B-JCVI	1051006	PRJNA68569	68569	Terrabacteria group	Actinobacteria	2.43067	60.2	-	AFUN01	50	2359	2100	7/21/11	4/7/17	Contig	J. Craig Venter Institute	SAMN02299458	GCA_000221145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/145/GCA_000221145.2_ASM22114v2	-	SK182B-JCVI
Endozoicomonas ascidiicola	1698521	PRJNA291960	291960	Proteobacteria	Gammaproteobacteria	6.51247	47.1	-	LUTW01	34	5114	4736	5/18/16	8/28/17	Scaffold	Aarhus University	SAMN03956933	GCA_001646955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/646/955/GCA_001646955.1_KASP37_1.0	-	KASP37
Klebsiella pneumoniae	573	PRJNA298912	298912	Proteobacteria	Gammaproteobacteria	5.65049	57.0185	chromosome:NZ_CP012992.1/CP012992.1; plasmid pKpN06-COL:NZ_CP014305.2/CP014305.2; plasmid pKpN06-CTX:NZ_CP012993.2/CP012993.2; plasmid unnamed 2:NZ_CP012994.1/CP012994.1; plasmid unnamed 3:NZ_CP012995.1/CP012995.1	-	5	5751	5445	12/3/15	2/21/17	Complete Genome	Calgary Laboratory Services	SAMN04168654	GCA_001456095.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/095/GCA_001456095.3_ASM145609v3	-	KpN06
Rhizobium bangladeshense	1138189	PRJNA321136	321136	Proteobacteria	Alphaproteobacteria	6.634	61.4	-	LYPL01	132	6467	6082	6/13/16	4/12/17	Contig	University of Minnesota	SAMN04966275	GCA_001662075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/075/GCA_001662075.1_ASM166207v1	-	1002
Yersinia entomophaga	935293	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.22335	48.5	-	MWTM01	93	3909	3529	6/14/17	6/14/17	Contig	SRCAMB	SAMN06344233	GCA_002192845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/845/GCA_002192845.1_ASM219284v1	-	SCPM-O-B-7183
Dietzia timorensis	499555	PRJNA300343	300343	Terrabacteria group	Actinobacteria	3.43061	65.3	-	LMTB01	164	3239	3031	5/25/16	4/12/17	Scaffold	Peking University	SAMN04219460	GCA_001651825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/825/GCA_001651825.1_ASM165182v1	-	ID05-A0528
Klebsiella pneumoniae	573	PRJNA293620	293620	Proteobacteria	Gammaproteobacteria	5.79855	57.018	chromosome:NZ_CP012568.1/CP012568.1; plasmid pUCLAOXA232-3.X:NZ_CP012569.1/CP012569.1; plasmid pUCLAOXA232-4.X:NZ_CP012570.1/CP012570.1; plasmid pUCLAOXA232-5.X:NZ_CP012571.1/CP012571.1; plasmid pUCLAOXA232-6.X:NZ_CP012572.1/CP012572.1	-	5	5898	5564	9/8/16	2/21/17	Complete Genome	UCLA Medical Center	SAMN04008893	GCA_001741545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/741/545/GCA_001741545.1_ASM174154v1	-	UCLAOXA232KP
Porphyromonadaceae bacterium H1	1658779	PRJDB4843	321503	FCB group	Bacteroidetes/Chlorobi group	2.71605	45.7	-	BDEK01	174	2315	2173	5/14/16	4/12/17	Contig	National Institute of Infectious Diseases	SAMD00051852	GCA_001653175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/175/GCA_001653175.1_ASM165317v1	-	H2
Enterobacter soli	885040	PRJEB9821	382651	Proteobacteria	Gammaproteobacteria	5.0204	53.8	-	FYBB01	131	4885	4694	6/9/17	6/21/17	Contig	JUSTUS LIEBIG UNIVERSITY	SAMEA104113920	GCA_900185935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/935/GCA_900185935.1_Enterobacter_soli_LMG_25861T_ERS954912	-	-
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA400335	400335	Proteobacteria	Gammaproteobacteria	5.50999	57.0168	chromosome:CP023134.1; chromosome unnamed1:CP023136.1; plasmid pKpvK54:CP023135.1	-	4	-	-	9/5/17	9/5/17	Complete Genome	Public Health England	SAMN07565840	GCA_002307335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/335/GCA_002307335.1_ASM230733v1	-	KpvK54
Marinobacter salarius	1420917	PRJNA380207	380207	Proteobacteria	Gammaproteobacteria	4.63016	57.0161	chromosome:NZ_CP020931.1/CP020931.1; plasmid pSMR5:NZ_CP020932.1/CP020932.1	-	2	4286	4189	5/1/17	5/31/17	Complete Genome	University of Gothenburg	SAMN06718375	GCA_002116735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/116/735/GCA_002116735.1_ASM211673v1	-	SMR5
Ochrobactrum pseudogrignonense	419475	PRJNA391102	391102	Proteobacteria	Alphaproteobacteria	5.53156	54	-	NNRM01	53	5311	5094	8/15/17	8/17/17	Contig	Intercollegiate Faculty of Biotechnology UG&MUG	SAMN07258024	GCA_002252525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/525/GCA_002252525.1_ASM225252v1	-	CCUG 30717
Vibrio ishigakensis	1481914	PRJDB1704	245978	Proteobacteria	Gammaproteobacteria	4.88645	46	-	BBSA01	56	6370	6311	1/22/15	6/16/16	Contig	The University of Tokyo	SAMD00017304	GCA_000830435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/435/GCA_000830435.1_ASM83043v1	-	JCM19232
Denitrobacterium detoxificans	79604	PRJEB16937	351101	Terrabacteria group	Actinobacteria	2.40765	59.4	-	FOEC01	38	2020	1879	10/29/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910314	GCA_900110565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/565/GCA_900110565.1_IMG-taxon_2593339223_annotated_assembly	-	DSM 21843
Eikenella sp. HMSC071B05	1739300	PRJNA299950	299950	Proteobacteria	Betaproteobacteria	2.20027	55.6	-	LTGG01	41	2141	2020	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477611	GCA_001811325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/325/GCA_001811325.1_ASM181132v1	-	HMSC071B05
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA251381	251381	Proteobacteria	Gammaproteobacteria	5.85831	57.007	chromosome:NZ_CP009775.1/CP009775.1; plasmid pKPC-def:NZ_CP009776.1/CP009776.1; plasmid pKPN-a68:NZ_CP009777.1/CP009777.1; plasmid pKPN-c8b:NZ_CP009778.1/CP009778.1	-	4	5957	5686	11/12/14	2/21/17	Complete Genome	NIH	SAMN02820981	GCA_000775395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/395/GCA_000775395.1_ASM77539v1	25232178	KPNIH32
Pseudomonas antarctica	219572	PRJEB16214	348995	Proteobacteria	Gammaproteobacteria	6.37717	59.5	chromosome I:NZ_LT629704.1/LT629704.1	-	1	5882	5565	10/20/16	4/13/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04490179	GCA_900103795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/795/GCA_900103795.1_IMG-taxon_2636416078_annotated_assembly	-	BS2772
Tsukamurella pseudospumae	239498	PRJNA311105	311105	Terrabacteria group	Actinobacteria	5.20633	70.1	-	LSRF01	126	5053	4880	2/26/16	4/12/17	Contig	The University of Hong Kong	SAMN04457858	GCA_001575195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/195/GCA_001575195.1_ASM157519v1	-	JCM 15929
Marinomonas gallaica	1806667	PRJEB14355	329208	Proteobacteria	Gammaproteobacteria	3.8288	45.3	-	FLRA01	37	3640	3480	7/16/16	4/13/17	Scaffold	UVEG	SAMEA4029000	GCA_900089975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/975/GCA_900089975.1_MgallaicaCECT5115_Velvet_Prokka	-	CECT 5115
Paraclostridium benzoelyticum	1629550	PRJNA306820	306820	Terrabacteria group	Firmicutes	3.18482	28.2	-	LQAO01	1824	3241	2754	8/4/17	8/4/17	Contig	UoH	SAMN04364423	GCA_002242135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/135/GCA_002242135.1_ASM224213v1	-	JC302
Pseudomonas brenneri	129817	PRJNA315753	315753	Proteobacteria	Gammaproteobacteria	6.01072	60.7	-	LVWZ01	217	5405	3821	5/10/16	5/10/16	Contig	RAJIV GANDHI CENTRE FOR BIOTECHNOLOGY	SAMN04569815	GCA_001641345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/345/GCA_001641345.1_ASM164134v1	-	RGCB 108
Rhodococcus kroppenstedtii	293050	PRJNA306614	306614	Terrabacteria group	Actinobacteria	3.91015	70.1	-	LPZO01	182	3674	3457	5/18/16	4/12/17	Scaffold	Northumbria University	SAMN04357311	GCA_001646725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/646/725/GCA_001646725.1_rkr83	-	DSM 44908
Rhodococcus kyotonensis	398843	PRJEB21427	391649	Terrabacteria group	Actinobacteria	6.31101	64.2	-	FZOW01	50	5860	5698	7/12/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421642	GCA_900188125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/125/GCA_900188125.1_IMG-taxon_2675903021_annotated_assembly	-	JCM 23211
Capnocytophaga canis	1848903	PRJEB8048	270927	FCB group	Bacteroidetes/Chlorobi group	2.54316	35.6	-	CDOH01	191	2158	2018	1/20/15	4/10/17	Contig	"BIOZENTRUM, UNIVERSITY OF BASEL"	SAMEA3180121	GCA_000827695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/827/695/GCA_000827695.1_CcanD95.1	-	CcD95
Domibacillus aminovorans	29332	PRJNA306604	306604	Terrabacteria group	Firmicutes	3.73113	40.8	-	LQWY01	74	3899	3607	5/13/16	8/22/17	Scaffold	CSIR-Institute of Mircrobial Technology	SAMN04357286	GCA_001643235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/235/GCA_001643235.1_ASM164323v1	-	DSM 1314
Fictibacillus arsenicus	255247	PRJNA276166	276166	Terrabacteria group	Firmicutes	3.90956	40.1	-	MQMF01	96	3999	3858	2/13/17	4/17/17	Contig	Centre for Cellular and Molecular Biology	SAMN03159267	GCA_001999465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/465/GCA_001999465.1_ASM199946v1	-	Con a/3
Pseudohongiella sp. SCS-111	1768906	PRJNA316660	316660	Proteobacteria	Gammaproteobacteria	3.41012	51.8	-	LWHN01	37	3093	2956	5/12/16	4/12/17	Scaffold	"Second Institute of Oceanography, State Oceanic Administration"	SAMN04589230	GCA_001642775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/775/GCA_001642775.1_SCS111-2fq	-	SCS-111
Gardnerella sp. 26-12	1841133	PRJNA316969	316969	Terrabacteria group	Actinobacteria	1.48391	42.6	-	LWSR01	175	1236	1112	6/9/16	4/12/17	Scaffold	Loyola University Chicago	SAMN04625631	GCA_001660745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/745/GCA_001660745.1_ASM166074v1	-	26-12
Marinomonas aquimarina	295068	PRJNA312814	312814	Proteobacteria	Gammaproteobacteria	3.6556	49	-	LTAV01	84	3402	3283	4/29/16	4/12/17	Contig	Universidad de Santiago de Compostela	SAMN04506841	GCA_001639695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/695/GCA_001639695.1_ASM163969v1	-	11SM4
Flavobacterium fryxellicola	249352	PRJEB18451	356022	FCB group	Bacteroidetes/Chlorobi group	3.70986	34.6	-	FRDK01	37	3247	3130	12/3/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444395	GCA_900143245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/245/GCA_900143245.1_IMG-taxon_2695420925_annotated_assembly	-	DSM 16209
Paenibacillus macquariensis subsp. defensor	467974	PRJNA316036	316036	Terrabacteria group	Firmicutes	6.01748	40.8	-	LVJG01	95	5688	5410	5/5/16	4/12/17	Contig	Korea University	SAMN04574063	GCA_001637215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/215/GCA_001637215.1_ASM163721v1	-	JCM 14954
Corynebacterium afermentans	38286	PRJEB18848	360737	Terrabacteria group	Actinobacteria	2.32669	64.9	-	FTMH01	45	2202	2069	1/14/17	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421802	GCA_900156035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/035/GCA_900156035.1_IMG-taxon_2681813557_annotated_assembly	-	DSM 44280
Achromobacter ruhlandii	72557	PRJNA295291	295291	Proteobacteria	Betaproteobacteria	6.68653	67.4	-	LVKM01	91	6182	5988	5/4/16	4/12/17	Contig	Universidade do Estado do Rio de Janeiro	SAMN04045713	GCA_001637085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/085/GCA_001637085.1_ASM163708v1	-	6241
Paraburkholderia kirstenboschensis	1245436	PRJNA190073	190073	Proteobacteria	Betaproteobacteria	8.34289	61.8	-	JRZC01	973	-	-	4/30/16	5/4/16	Contig	University of Pretoria	SAMN03098911	GCA_001636975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/975/GCA_001636975.1_ASM163697v1	26472229	KB15
Bacillus gottheilii	859144	PRJEB19433	374831	Terrabacteria group	Firmicutes	4.77857	39.1	-	FUVC01	5	4631	4442	3/18/17	4/3/17	Scaffold	URMITE	SAMEA89877418	GCA_900166665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/665/GCA_900166665.1_PRJEB19433	-	Marseille-P3555
Clostridium coskatii	1705578	PRJNA309365	309365	Terrabacteria group	Firmicutes	4.53884	31.1	-	LROR01	112	4271	4028	6/22/16	4/13/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04432158	GCA_001675205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/205/GCA_001675205.1_ASM167520v1	27458439	PTA-10522
Bacillus nakamurai	1793963	PRJNA299292	299292	Terrabacteria group	Firmicutes	3.88826	44.8	-	LSBA01	40	4102	3789	3/9/16	4/12/17	Contig	NCAUR-ARS-USDA	SAMN04450410	GCA_001584345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/345/GCA_001584345.1_ASM158434v1	-	NRRL B-41092
Trichococcus sp. DSM 22150	1855308	PRJEB16785	350919	Terrabacteria group	Firmicutes	3.09051	49	-	FNYT01	60	2902	2778	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216375	GCA_900109135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/135/GCA_900109135.1_IMG-taxon_2619618824_annotated_assembly	-	DSM 22150
Bordetella ansorpii	288768	PRJEB2850	204590	Proteobacteria	Betaproteobacteria	6.15351	66.7	-	FKBS01	33	5476	5302	4/6/16	4/12/17	Scaffold	SC	SAMEA1982600	GCA_900078315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/315/GCA_900078315.1_7642_7_30	-	NCTC13364
Thalassolituus sp. UBA885	1947671	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.20896	53.1	-	DBFH01	61	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457642	GCA_002294235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/235/GCA_002294235.1_ASM229423v1	28894102	-
Oleiphilus sp. HI0079	1822254	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	4.40702	47.5	-	LWFT01	1448	4233	3626	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580793	GCA_001635105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/105/GCA_001635105.1_ASM163510v1	-	HI0079
bacterium 2013Ark19i	1561004	PRJEB7439	304961	unclassified Bacteria	unclassified Bacteria (miscellaneous)	2.24869	35.4	-	FKIJ01	111	1625	1510	4/7/16	8/1/17	Contig	Functional Genomics Genter Zurich	SAMEA3903147	GCA_900078725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/725/GCA_900078725.1_2013Ark11A	-	-
Paenibacillus glucanolyticus	59843	PRJNA309413	309413	Terrabacteria group	Firmicutes	7.03989	48.1	-	LWMH01	3	6445	6194	4/27/16	4/12/17	Contig	North Carolina State University	SAMN04432833	GCA_001633025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/025/GCA_001633025.1_ASM163302v1	-	SLM1
Haladaptatus sp. W1	1897478	PRJNA341487	341487	Euryarchaeota	Halobacteria	5.19257	60.3	-	MEIH01	420	5451	4518	9/12/16	4/13/17	Contig	University of Essex	SAMN05725119	GCA_001723155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/155/GCA_001723155.1_ASM172315v1	-	W1
Oerskovia enterophila	43678	PRJNA327196	327196	Terrabacteria group	Actinobacteria	4.65151	72.3	-	MAQA01	114	4097	3907	7/22/16	4/13/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05323878	GCA_001692445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/445/GCA_001692445.1_ASM169244v1	-	DSM 43852
Clostridium magnum DSM 2767	1121326	PRJEB18247	355530	Terrabacteria group	Firmicutes	6.47225	31.8	-	FQXL01	102	6101	5699	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745944	GCA_900129955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/955/GCA_900129955.1_IMG-taxon_2585428069_annotated_assembly	-	DSM 2767
Hydrotalea flava	714549	PRJEB14091	329620	FCB group	Bacteroidetes/Chlorobi group	1.10526	36.9	-	FLNS01	92	1067	970	7/19/16	4/5/17	Contig	FIOCRUZ-MG	SAMEA4028670	GCA_900089525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/525/GCA_900089525.1_L11	-	-
Bacillus encimensis	1414647	PRJNA312153	312153	Terrabacteria group	Firmicutes	3.96134	44	-	MAIG01	53	3964	3817	8/5/16	4/13/17	Contig	CSIR-Institute of Microbial Technology	SAMN04489741	GCA_001700275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/275/GCA_001700275.1_ASM170027v1	-	SGD-V-25
Nitrosopelagicus sp. REDSEA-S08_B1	1811582	PRJNA289734	289734	TACK group	Thaumarchaeota	0.57679	35.3	-	LUOX01	92	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534599	GCA_001626095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/095/GCA_001626095.1_ASM162609v1	27377622	-
Candidatus Thioglobus sp. REDSEA-S14_B12	1811595	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	1.83223	39.8	-	LURO01	262	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534669	GCA_001628365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/365/GCA_001628365.1_ASM162836v1	27377622	-
Pseudovibrio axinellae	989403	PRJNA298121	298121	Proteobacteria	Alphaproteobacteria	5.1262	50.3	-	LMCB01	162	4691	4515	4/19/16	4/12/17	Contig	University College Cork	SAMN04147116	GCA_001623255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/255/GCA_001623255.1_ASM162325v1	27065959	Ad2
Fictibacillus phosphorivorans	1221500	PRJNA309008	309008	Terrabacteria group	Firmicutes	4.15046	39.4	-	LRFC01	41	4206	4104	4/13/16	4/12/17	Contig	University of Malaya	SAMN04419313	GCA_001619875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/875/GCA_001619875.1_ASM161987v1	-	P7IIIA
Chelatococcus daeguensis	444444	PRJNA308065	308065	Proteobacteria	Alphaproteobacteria	4.218	67.9	-	LQQT01	48	4008	3901	4/13/16	4/12/17	Contig	University of Malaya	SAMN04386422	GCA_001619665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/665/GCA_001619665.1_ASM161966v1	-	M3
Tardiphaga sp. OK245	1855306	PRJEB15765	347734	Proteobacteria	Alphaproteobacteria	6.35686	61.5	-	FNWZ01	12	5945	5815	10/27/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216367	GCA_900108575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/575/GCA_900108575.1_IMG-taxon_2609459751_annotated_assembly	-	OK245
Amycolatopsis keratiniphila subsp. keratiniphila	227715	PRJNA307628	307628	Terrabacteria group	Actinobacteria	9.09184	69	-	LQMT02	72	8449	8181	4/14/16	4/17/17	Scaffold	Institute of Microbial Technology	SAMN04384022	GCA_001620365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/365/GCA_001620365.2_ASM162036v2	-	DSM 44409
Microbulbifer thermotolerans	252514	PRJEB17172	351356	Proteobacteria	Gammaproteobacteria	3.92581	56.5	-	FOKT01	30	3332	3210	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660479	GCA_900112305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/305/GCA_900112305.1_IMG-taxon_2599185213_annotated_assembly	-	DSM 19189
Streptobacillus notomytis	1712031	PRJNA294926	294926	Fusobacteria	Fusobacteriia	1.37035	26.5	-	LKKV01	154	1283	1181	12/8/16	4/16/17	Contig	Robert Koch Institute	SAMN04099670	GCA_001902585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/585/GCA_001902585.1_ASM190258v1	-	KWG24
Arcobacter lanthieri	1355374	PRJNA235330	235330	Proteobacteria	delta/epsilon subdivisions	2.26009	26.8	-	JARV01	22	2286	2186	3/3/14	4/9/17	Scaffold	Agriculture and Agri-Food Canada	SAMN02951875	GCA_000585195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/195/GCA_000585195.1_Arcobacter_lanthierii_AF1581	"2,483,114,325,977,280"	AF1581
Rummeliibacillus stabekisii	241244	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.20827	37.5	-	DCNT01	17	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455566	GCA_002322115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/115/GCA_002322115.1_ASM232211v1	28894102	-
Mycobacterium interjectum	33895	PRJEB13236	317077	Terrabacteria group	Actinobacteria	5.84791	67.9	-	FJVQ01	221	5878	5149	4/1/16	4/17/17	Contig	URMITE	SAMEA3913390	GCA_900078675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/675/GCA_900078675.1_PRJEB13236	-	type strain: ATCC 51457
Pontibacter akesuensis	388950	PRJEB17590	351939	FCB group	Bacteroidetes/Chlorobi group	4.81628	51	-	FPCA01	16	4124	4042	11/2/16	4/14/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487941	GCA_900116885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/885/GCA_900116885.1_IMG-taxon_2622736541_annotated_assembly	-	DSM 18820
Klebsiella pneumoniae	573	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	5.78213	57.0057	chromosome:NZ_CP021944.1/CP021944.1; plasmid tig00000194:NZ_CP021945.1/CP021945.1; plasmid tig00000195:NZ_CP021946.1/CP021946.1; plasmid tig00000200:NZ_CP021947.1/CP021947.1; plasmid tig00000214:NZ_CP021948.1/CP021948.1; plasmid tig00000216_u:NZ_CP021949.1/CP021949.1	-	6	5823	5560	6/20/17	6/22/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014993	GCA_002202235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/235/GCA_002202235.1_ASM220223v1	-	AR_0152
Flavobacterium chilense	946677	PRJEB18378	355796	FCB group	Bacteroidetes/Chlorobi group	6.11383	33.7	-	FRBT01	28	5176	5046	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444484	GCA_900142685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/685/GCA_900142685.1_IMG-taxon_2700988709_annotated_assembly	-	DSM 24724
Photobacterium sanguinicancri	875932	PRJNA301601	301601	Proteobacteria	Gammaproteobacteria	5.47542	43.7	-	NOIF01	569	4874	4649	8/22/17	8/24/17	Scaffold	"CIAD, A.C."	SAMN04252530	GCA_002265265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/265/GCA_002265265.1_ASM226526v1	27048242	CAIM 1827
Klebsiella pneumoniae	573	PRJNA279656	279656	Proteobacteria	Gammaproteobacteria	5.73034	57.0043	chromosome:NZ_CP015130.1/CP015130.1; plasmid pKPN-7c3:NZ_CP015131.1/CP015131.1; plasmid pKPN-d6b:NZ_CP015133.1/CP015133.1; plasmid pKPN-d90:NZ_CP015132.1/CP015132.1	-	4	5787	5478	6/16/16	2/21/17	Complete Genome	NHGRI	SAMN03455976	GCA_001663455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/455/GCA_001663455.1_ASM166345v1	-	Kpn555
Nocardia arizonensis	1141647	PRJDB4698	316837	Terrabacteria group	Actinobacteria	7.20198	67.9	-	BDCT01	99	6547	6265	4/6/16	4/12/17	Contig	National Institute of Technology and Evaluation Biological Resource Center	SAMD00050603	GCA_001618405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/405/GCA_001618405.1_ASM161840v1	-	NBRC 108935
Vibrio renipiscarius	1461322	PRJNA266963	266963	Proteobacteria	Gammaproteobacteria	4.34735	45.2	-	JTKI01	44	3935	3758	1/23/15	4/10/17	Contig	University of Valencia	SAMN03176900	GCA_000827875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/827/875/GCA_000827875.1_ASM82787v1	25767236	DCR 1-4-12
Edwardsiella anguillarum ET080729	1436000	PRJNA231550	231550	Proteobacteria	Gammaproteobacteria	4.15319	58.4	-	JABS01	115	3881	3616	12/18/14	4/10/17	Contig	East China University of Science and Technology	SAMN02568607	GCA_000804575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/575/GCA_000804575.1_ASM80457v1	25466920	ET080729
Klebsiella pneumoniae	573	PRJNA322244	322244	Proteobacteria	Gammaproteobacteria	5.80373	57.0021	chromosome:NZ_CP015822.1/CP015822.1; plasmid 1:NZ_CP015823.1/CP015823.1; plasmid 2:NZ_CP015824.1/CP015824.1; plasmid 3:NZ_CP015825.1/CP015825.1	-	4	5954	5684	8/16/16	2/21/17	Complete Genome	Swiss Institute of Bioinformatics	SAMN05149976	GCA_001705385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/385/GCA_001705385.1_ASM170538v1	-	-
Brevundimonas vesicularis NBRC 12165	1349759	PRJDB1343	231399	Proteobacteria	Alphaproteobacteria	3.35843	66.3	-	BCWM01	42	3294	3209	3/4/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00047217	GCA_001592205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/205/GCA_001592205.1_ASM159220v1	-	NBRC 12165
Bacillus novalis NBRC 102450	1349756	PRJDB1340	231396	Terrabacteria group	Firmicutes	5.56955	39.9	-	BCVP01	97	5377	5212	2/27/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00047002	GCA_001591805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/805/GCA_001591805.1_ASM159180v1	-	NBRC 102450
Serratia ficaria NBRC 102596	1411141	PRJDB1514	224747	Proteobacteria	Gammaproteobacteria	5.26172	59.9	-	BCTS01	91	5012	4839	2/23/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046907	GCA_001590885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/590/885/GCA_001590885.1_ASM159088v1	-	NBRC 102596
Polynucleobacter sp. MWH-Tro8-2-5-gr	1855606	PRJNA278737	278737	Proteobacteria	Betaproteobacteria	2.17884	45.5	-	LZMR01	27	2174	2115	11/7/16	4/13/17	Contig	University of Innsbruck	SAMN05214349	GCA_001870385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/385/GCA_001870385.1_ASM187038v1	-	MWH-Tro8-2-5-gr
Bacillus soli	220688	PRJNA390044	390044	Terrabacteria group	Firmicutes	5.5799	39.7	-	NISV01	4	-	-	9/21/17	9/23/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN07212157	GCA_002335815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/815/GCA_002335815.1_ASM233581v1	-	DSM 15604
Obesumbacterium proteus ATCC 12841	1354268	PRJNA210919	210919	Proteobacteria	Gammaproteobacteria	5.15805	49	-	LXEX01	238	4933	4644	6/2/16	4/12/17	Contig	UW-GEL (University of Wisconsin - Genome Evolution Laboratory)	SAMN04875435	GCA_001655035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/035/GCA_001655035.1_Opr12841_DRAFTv1	-	ATCC 12841
Brevibacterium ravenspurgense	479117	PRJNA305115	305115	Terrabacteria group	Actinobacteria	2.39219	62.4	-	LPXW01	38	2187	2081	3/9/16	4/12/17	Contig	Public Health Agency of Canada	SAMN04317115	GCA_001584355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/355/GCA_001584355.1_ASM158435v1	-	NML 140868
Snodgrassella sp. R-53583	1798181	PRJEB15023	336297	Proteobacteria	Betaproteobacteria	2.2963	43.2	-	FMAP01	25	2167	2059	8/3/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487800	GCA_900094895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/895/GCA_900094895.1_IMG-taxon_2615840607_annotated_assembly	-	R-53583
Actinomyces sp. Marseille-P2985	1852377	PRJEB17949	353839	Terrabacteria group	Actinobacteria	1.89255	57	chromosome contig00001:NZ_LT635457.1/LT635457.1	-	1	1674	1581	11/23/16	4/14/17	Complete Genome	URMITE	SAMEA4555081	GCA_900120245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/245/GCA_900120245.1_PRJEB17949	-	Marseille-P2985
Gluconobacter albidus	318683	PRJNA288385	288385	Proteobacteria	Alphaproteobacteria	3.27019	59.6	-	LHZN01	146	3082	2909	3/7/16	4/12/17	Contig	Ghent University	SAMN03799284	GCA_001580845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/845/GCA_001580845.1_ASM158084v1	-	LMG 1356
Halanaerobium sp. 4-GBenrich	1884872	PRJNA308326	308326	Terrabacteria group	Firmicutes	1.47345	34.4	-	MCNP01	157	1477	1477	9/13/16	9/13/16	Contig	The Ohio State University	SAMN05172290	GCA_001723995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/995/GCA_001723995.1_ASM172399v1	-	-
Gluconobacter japonicus	376620	PRJNA288385	288385	Proteobacteria	Alphaproteobacteria	3.04028	55.9	-	LHZJ01	85	2881	2708	3/7/16	4/12/17	Contig	Ghent University	SAMN03799280	GCA_001580765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/765/GCA_001580765.1_ASM158076v1	-	LMG 1417
Acetobacter cerevisiae	178900	PRJNA288385	288385	Proteobacteria	Alphaproteobacteria	3.22508	57.7	-	LHZY01	177	2982	2773	3/7/16	4/12/17	Contig	Ghent University	SAMN03799300	GCA_001581075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/075/GCA_001581075.1_ASM158107v1	-	LMG 1608
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA295651	295651	Proteobacteria	Gammaproteobacteria	5.43972	57	chromosome:NZ_CP012743.1/CP012743.1	-	1	5509	5192	4/5/16	2/21/17	Complete Genome	RGNOSIS	SAMN04087461	GCA_001611055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/055/GCA_001611055.1_ASM161105v1	26968884	TGH8
Rhodoplanes sp. JGI PP 4-B12	1873883	PRJEB21435	391634	Proteobacteria	Alphaproteobacteria	0.202382	60.3	-	FYEN01	17	215	199	6/23/17	6/28/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05414138	GCA_900188135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/135/GCA_900188135.1_IMG-taxon_2675903048_annotated_assembly	-	JGI PP 4-B12
Pyrobaculum ferrireducens	1104324	PRJNA74711	74711	TACK group	Crenarchaeota	2.46797	57	chromosome:CP003098.1	-	1	2891	2827	11/10/11	1/11/16	Complete Genome	Centre Bioengineering RAS	SAMN02603094	GCA_000234805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/805/GCA_000234805.1_ASM23480v1	-	1860
Brucella vulpis	981386	PRJEB12177	307452	Proteobacteria	Alphaproteobacteria	3.23814	57.1328	chromosome 1:NZ_LN998033.1/LN998033.1; chromosome 2:NZ_LN998034.1/LN998034.1	-	2	3352	2861	1/6/16	4/21/17	Chromosome	JLU	SAMEA3715144	GCA_001511795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/795/GCA_001511795.1_BVF965	-	F965
Lactococcus sp. Rs-Y01	2025039	PRJDB6150	398635	Terrabacteria group	Firmicutes	2.1696	41.3	-	BEDT01	20	2159	2069	8/11/17	10/2/17	Contig	"Microbe Division (RIKEN BRC JCM), RIKEN BioResource Center"	SAMD00089645	GCA_002260845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/845/GCA_002260845.1_ASM226084v1	28935745	Rs-Y01
Methanohalophilus sp. DAL1	1864608	PRJNA309130	309130	Euryarchaeota	Methanomicrobia	1.89417	42.4	-	MAFX01	58	2038	1892	7/11/16	7/11/16	Contig	University of Pittsburgh	SAMN05258748	GCA_001683555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/555/GCA_001683555.1_ASM168355v1	-	-
Methanolobus sp. T82-4	1794908	PRJNA308326	308326	Euryarchaeota	Methanomicrobia	2.65404	43.7	-	LSRV01	145	2692	2692	2/29/16	2/29/16	Contig	The Ohio State University	SAMN04432770	GCA_001577565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/565/GCA_001577565.1_ASM157756v1	-	-
Pseudoclavibacter helvolus	255205	PRJEB9960	310452	Terrabacteria group	Actinobacteria	4.0046	67	-	CZJS01	195	3797	3575	2/2/16	4/12/17	Contig	Universitetsparken 15	SAMEA3490270	GCA_900016305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/305/GCA_900016305.1_Draft_genome_of_Kocuria_palustris_strain_W4	-	W3
Tsukamurella pulmonis	47312	PRJNA311101	311101	Terrabacteria group	Actinobacteria	4.7352	70.9	-	LSRH01	59	4597	4441	2/26/16	4/11/17	Contig	The University of Hong Kong	SAMN04457854	GCA_001575165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/165/GCA_001575165.1_ASM157516v1	-	CCUG 35732
Tsukamurella tyrosinosolvens	57704	PRJNA311103	311103	Terrabacteria group	Actinobacteria	5.22345	71.1	-	LSRJ01	71	5252	5075	2/26/16	4/12/17	Contig	The University of Hong Kong	SAMN04457856	GCA_001575155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/155/GCA_001575155.1_ASM157515v1	-	CCUG 38499
Enterobacter cloacae EC_38VIM1	1334630	PRJNA203245	203245	Proteobacteria	Gammaproteobacteria	5.15501	55.4	-	ATHX01	84	5050	4812	8/2/13	4/20/17	Scaffold	"Microbiology Department, Hospital 12 de octubre"	SAMN02194084	GCA_000467655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/655/GCA_000467655.2_EC_38VIM1	24009122	EC_38VIM1
uncultured Clostridia bacterium	244328	PRJEB10932	303149	Terrabacteria group	Firmicutes	1.78621	56.9	-	FIZK01	145	-	-	2/12/16	2/12/16	Scaffold	Center for Microbial Communities	SAMEA3730006	GCA_900018335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/335/GCA_900018335.1_Clostridia_bin_genome_3	-	-
Christensenella minuta	626937	PRJNA275752	275752	Terrabacteria group	Firmicutes	2.90653	51.5	-	LSZW01	53	2797	2685	2/24/16	4/12/17	Scaffold	The Genome Institute at Washington University	SAMN04498914	GCA_001571425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/425/GCA_001571425.1_ASM157142v1	-	DSM 22607
Ferrimonas marina NBRC 102583	1349749	PRJDB1333	231389	Proteobacteria	Gammaproteobacteria	4.96985	60.5	-	BCTE01	60	4644	4566	2/18/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046733	GCA_001571125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/125/GCA_001571125.1_ASM157112v1	-	NBRC 102583
Micrococcus lylae	1273	PRJEB19177	374434	Terrabacteria group	Actinobacteria	2.67088	71.3	-	FUKP01	74	2322	2191	2/11/17	5/31/17	Contig	MICALIS	SAMEA81153418	GCA_900163825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/825/GCA_900163825.1_ASM90016382v1	-	2B3F
Paenibacillus amylolyticus	1451	PRJNA343020	343020	Terrabacteria group	Firmicutes	7.0031	45.8	-	MRTG01	62	6116	5988	1/18/17	4/17/17	Contig	Cornell University	SAMN05929607	GCA_001955995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/995/GCA_001955995.1_ASM195599v1	-	FSL F4-0260
Streptomyces sporocinereus	284037	PRJDB3204	311024	Terrabacteria group	Actinobacteria	10.1654	72	-	BCAN01	217	8492	7806	2/2/16	3/12/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00040622	GCA_001570645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/645/GCA_001570645.1_ASM157064v1	-	NBRC 100766
Mycobacterium canariasense	228230	PRJDB4227	295926	Terrabacteria group	Actinobacteria	6.73461	67.6	-	BCSY01	140	6735	6462	2/10/16	4/17/17	Scaffold	"Microbiology, Graduate School of Medical Sciences, Kyushu University"	SAMD00041173	GCA_001570445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/445/GCA_001570445.1_ASM157044v1	27231354	JCM15298
Neptuniibacter sp. UBA847	1946977	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.96969	42.7	-	DBGT01	154	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450584	GCA_002295945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/945/GCA_002295945.1_ASM229594v1	28894102	-
Pseudomonas composti	658457	PRJEB17262	351489	Proteobacteria	Gammaproteobacteria	5.39249	62.4	-	FOWP01	28	4997	4859	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216601	GCA_900115475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/475/GCA_900115475.1_IMG-taxon_2663762774_annotated_assembly	-	CCUG 59231
Faecalibaculum rodentium	1702221	PRJNA353002	353002	Terrabacteria group	Firmicutes	2.41579	53.8	-	MPJZ01	100	2361	2253	1/11/17	4/16/17	Contig	Brigham and Women's Hospital	SAMN06008029	GCA_001945535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/535/GCA_001945535.1_ASM194553v1	-	NYU-BL-K8
Methanobrevibacter olleyae	294671	PRJEB17460	351692	Euryarchaeota	Methanobacteria	2.12244	26.8	-	FOTL01	49	1831	1723	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910297	GCA_900114585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/585/GCA_900114585.1_IMG-taxon_2593339150_annotated_assembly	-	DSM 16632
Lysinimicrobium rhizosphaerae	1638985	PRJDB3045	262019	Terrabacteria group	Actinobacteria	3.00175	72.4	-	BBMG01	17	2815	2721	4/1/15	4/10/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00019190	GCA_000971435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/435/GCA_000971435.1_ASM97143v1	26354549	NBRC 110049
Lysinimicrobium aestuarii	1638982	PRJDB3045	262019	Terrabacteria group	Actinobacteria	3.00546	72.1	-	BBMF01	9	2846	2777	4/1/15	4/10/17	Contig	National Institute of Technology and Evaluation Biological Resource Center	SAMD00019189	GCA_000971415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/415/GCA_000971415.1_ASM97141v1	26354549	NBRC 110048
Amycolatopsis regifaucium	546365	PRJNA304488	304488	Terrabacteria group	Actinobacteria	8.28302	68.5	-	LOBU02	62	7680	7381	2/10/16	4/16/17	Scaffold	CSIR-Institute of Microbial Technology	SAMN04303379	GCA_001558125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/125/GCA_001558125.2_ASM155812v2	-	GY080
Pseudoalteromonas shioyasakiensis	1190813	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	6.71872	41.7	-	LWFC01	2964	6034	5114	5/2/16	5/2/16	Contig	Massachusetts Institute of Technology	SAMN04580776	GCA_001635595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/595/GCA_001635595.1_ASM163559v1	-	HI0053
Photobacterium aquimaris	512643	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.66165	39.7	-	LZFA01	108	4173	3861	6/24/16	4/13/17	Contig	FDA/CFSAN	SAMN04507560	GCA_001676065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/065/GCA_001676065.1_ASM167606v1	-	GCSL-P87
Porphyrobacter donghaensis	267135	PRJNA322640	322640	Proteobacteria	Alphaproteobacteria	3.37228	66.2	-	MUYG01	11	3182	3103	5/22/17	5/24/17	Contig	"Second Institute of Oceanography, State Oceanic Administration"	SAMN06251561	GCA_002155425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/425/GCA_002155425.1_ASM215542v1	-	DSM 16220
Neisseria perflava	33053	PRJNA299404	299404	Proteobacteria	Betaproteobacteria	1.03109	50.8	-	LSIT01	181	-	-	2/10/16	2/10/16	Contig	Georgia Institute of Technology	SAMN04299444	GCA_001556395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/395/GCA_001556395.1_ASM155639v1	-	CCH10-H12
Celeribacter halophilus	576117	PRJNA306244	306244	Proteobacteria	Alphaproteobacteria	3.95885	58.1	-	LRUD01	71	3827	3685	2/5/16	4/11/17	Scaffold	"Second Institute of Oceanography, State Oceanic Administration"	SAMN04432131	GCA_001550085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/550/085/GCA_001550085.1_ASM155008v1	-	ZXM137
Enterobacter lignolyticus SCF1	701347	PRJNA53533	53533	Proteobacteria	Gammaproteobacteria	4.81405	57	chromosome:NC_014618.1/CP002272.1	-	1	4601	4412	10/15/10	4/7/17	Complete Genome	US DOE Joint Genome Institute	SAMN00116754	GCA_000164865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/865/GCA_000164865.1_ASM16486v1	22180812	SCF1
Heliobacterium modesticaldum Ice1	498761	PRJNA13427	13427	Terrabacteria group	Firmicutes	3.07541	57	chromosome:NC_010337.2/CP000930.2	-	1	2864	2672	2/11/08	4/17/17	Complete Genome	Arizona State University	SAMN02602985	GCA_000019165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/165/GCA_000019165.1_ASM1916v1	18441057	Ice1; ATCC 51547
Paenibacillus jilunlii	682956	PRJEB16129	348582	Terrabacteria group	Firmicutes	7.03211	50.8	-	FNGM01	39	6147	5913	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216191	GCA_900102965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/965/GCA_900102965.1_IMG-taxon_2667527409_annotated_assembly	-	CGMCC 1.10239
Streptomyces thermoautotrophicus	1469144	PRJNA260991	260991	Terrabacteria group	Actinobacteria	5.01493	69.2	-	LAXD01	7	4238	4029	2/1/16	9/20/17	Scaffold	Harvard Medical School	SAMN02911631	GCA_001543925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/925/GCA_001543925.1_ASM154392v1	-	H1
Mycobacterium wolinskyi	59750	PRJNA296779	296779	Terrabacteria group	Actinobacteria	7.44974	66.5	-	LGTW01	76	7252	7021	2/2/16	4/17/17	Contig	Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion	SAMN04113082	GCA_001545135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/135/GCA_001545135.1_ASM154513v1	26988052	CDC_01
Kordiimonas lacus	637679	PRJEB15781	347720	Proteobacteria	Alphaproteobacteria	4.00082	57.2	-	FNAK01	12	3697	3624	10/20/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488071	GCA_900101935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/935/GCA_900101935.1_IMG-taxon_2617270924_annotated_assembly	-	CGMCC 1.9109
Gemella sp. Marseille-P3249	1909670	PRJEB18020	354762	Terrabacteria group	Firmicutes	1.80481	30.5	-	FQLS01	7	1684	1550	11/24/16	4/16/17	Scaffold	URMITE	SAMEA4555189	GCA_900120125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/125/GCA_900120125.1_PRJEB18020	-	Marseille-P3249
Enterococcus canis	214095	PRJNA270385	270385	Terrabacteria group	Firmicutes	2.81825	41.9	-	JXKH01	82	2724	2627	11/25/16	4/16/17	Scaffold	Inner Mongolia Agricultural University	SAMN03267164	GCA_001885805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/805/GCA_001885805.1_ASM188580v1	-	DSM 17029
Hydrogenibacillus schlegelii	1484	PRJNA274415	274415	Terrabacteria group	Firmicutes	2.59218	66	-	JYFD01	233	2598	2274	2/1/16	4/11/17	Scaffold	Harvard Medical School	SAMN03328455	GCA_001543875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/875/GCA_001543875.1_ASM154387v1	-	DSM 2000
Aerococcus urinaehominis	128944	PRJEB16196	348924	Terrabacteria group	Firmicutes	1.78046	42.7	-	FNHJ01	42	1680	1594	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487985	GCA_900103385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/385/GCA_900103385.1_IMG-taxon_2619619005_annotated_assembly	-	DSM 15634
Microterricola viridarii	412690	PRJEB16382	349314	Terrabacteria group	Actinobacteria	3.83782	69.6	chromosome I:NZ_LT629742.1/LT629742.1	-	1	3510	3402	10/21/16	4/13/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489834	GCA_900104895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/895/GCA_900104895.1_IMG-taxon_2634166341_annotated_assembly	-	DSM 21772
Micromonospora rifamycinica	291594	PRJNA309600	309600	Terrabacteria group	Actinobacteria	6.84854	73.1	-	LRMV01	388	5969	5587	1/28/16	4/17/17	Contig	Jiangxi Normal University	SAMN04437042	GCA_001542325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/325/GCA_001542325.1_ASM154232v1	-	AM105
Burkholderia latens	488446	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.49916	66.5	-	LOTQ01	62	5972	5689	1/21/16	4/11/17	Contig	Northern Arizona University	SAMN03449152	GCA_001525985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/985/GCA_001525985.1_ASM152598v1	-	RF32-BP12
Vibrio toranzoniae	1194427	PRJNA298129	298129	Proteobacteria	Gammaproteobacteria	4.53732	43.9	-	LMXU01	165	4019	3879	1/26/16	4/11/17	Contig	Universidad de Santiago de Compostela	SAMN04155649	GCA_001541335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/335/GCA_001541335.1_ASM154133v1	27034502	Vb 10.8
Elizabethkingia genomosp. 4	1756150	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	4.18483	35.6	-	MAIC01	18	3826	3721	3/7/17	3/10/17	Contig	CDC	SAMN05281858	GCA_002023065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/065/GCA_002023065.1_ASM202306v1	-	G4123
Candidatus Kryptonium thompsoni	1633631	PRJEB11722	301871	FCB group	Candidatus Kryptonia	2.22739	37.4	-	CZVX01	133	2130	1943	11/11/15	4/11/17	Scaffold	DOE - Joint Genome Institute	SAMN03435931	GCA_001458535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/535/GCA_001458535.1_JGI_assembly	-	JGI-11
Burkholderia anthina	179879	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.19508	67.2	-	LOVW01	85	6703	6325	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449214	GCA_001523905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/905/GCA_001523905.1_ASM152390v1	-	AZ-4-2-30-S1-D7
Burkholderia pseudomultivorans	1207504	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.80131	67.5	-	LOUV01	128	7149	6840	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449184	GCA_001523105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/105/GCA_001523105.1_ASM152310v1	-	SUB-INT22-BP2
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.57584	67.7	-	LOUZ01	85	6910	6549	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449189	GCA_001523185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/185/GCA_001523185.1_ASM152318v1	-	MSMB1136
Burkholderia diffusa	488732	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	5.84157	66.7	-	LOTC01	51	5410	5173	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449136	GCA_001522375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/375/GCA_001522375.1_ASM152237v1	-	RF8-non_BP2
Elizabethkingia genomosp. 3	1756149	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	4.38585	35.8	-	MAHV01	26	4086	3981	3/7/17	3/10/17	Contig	CDC	SAMN05277827	GCA_002023205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/205/GCA_002023205.1_ASM202320v1	-	G0146
Caviibacter abscessus	1766719	PRJNA305231	305231	Fusobacteria	Fusobacteriia	1.30243	27	-	LOQH01	144	1241	1176	1/19/16	4/11/17	Contig	Robert Koch Institute	SAMN04320710	GCA_001517865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/865/GCA_001517865.1_ASM151786v1	-	151011837
Acholeplasmatales bacterium DTU067	1671634	PRJNA283298	283298	Terrabacteria group	Tenericutes	1.46914	47.2	-	LFRY01	91	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03778949	GCA_001512995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/995/GCA_001512995.1_ASM151299v1	26839589	-
Bacillus halotolerans	260554	PRJNA306582	306582	Terrabacteria group	Firmicutes	4.07273	43.9	-	LPVF01	14	4199	3888	1/19/16	9/5/17	Contig	NCAUR-ARS-USDA	SAMN04358094	GCA_001517105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/105/GCA_001517105.1_ASM151710v1	27030978	ATCC 25096
Apibacter mensalis	1586267	PRJEB12549	310080	FCB group	Bacteroidetes/Chlorobi group	2.3311	30.5	-	FCOR01	42	2093	1995	1/30/16	4/12/17	Scaffold	DOE - Joint Genome Institute	SAMN03992719	GCA_900018365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/365/GCA_900018365.1_IMG-taxon_2615840617_annotated_assembly	-	R-53146
Acidibacillus ferrooxidans	1765683	PRJNA304017	304017	Terrabacteria group	Firmicutes	3.16459	52.1	-	LPVJ01	72	3143	2959	1/15/16	4/11/17	Contig	Redox	SAMN04302102	GCA_001516615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/615/GCA_001516615.1_ASM151661v1	26988062	ITV01
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.8831	66.4945	chromosome 1:NZ_CM004191.1/CM004191.1; chromosome 2:NZ_CM004192.1/CM004192.1; chromosome 3:NZ_CM004193.1/CM004193.1	LNJV01	4	6308	5954	5/2/16	4/5/17	Chromosome	Northern Arizona University	SAMN03449584	GCA_001636095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/095/GCA_001636095.1_ASM163609v1	-	MSMB2203WGS
Halobacterium hubeiense	1407499	PRJEB8631	319516	Euryarchaeota	Halobacteria	3.23578	66.4	-	CEMN01	16	3381	3198	4/24/16	7/28/17	Scaffold	UH	SAMEA3268806	GCA_900003505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/003/505/GCA_900003505.1_ASM90000350v1	-	JI20-3
Lutibacter sp. BRH_c52	1734397	PRJNA257561	257561	FCB group	Bacteroidetes/Chlorobi group	3.17911	35.2	-	LOEY01	84	2891	2751	1/15/16	1/15/16	Contig	EPFL	SAMN04126960	GCA_001516145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/145/GCA_001516145.1_41k	-	-
Caldivirga sp. CIS_19	1714255	PRJNA295311	295311	TACK group	Crenarchaeota	1.44727	48.4	-	LOCC01	126	1600	1180	1/15/16	1/15/16	Scaffold	Montana State University	SAMN04045692	GCA_001515805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/805/GCA_001515805.1_ASM151580v1	-	-
Paenibacillus pabuli	1472	PRJNA343020	343020	Terrabacteria group	Firmicutes	6.92106	46	-	MRTE01	33	6129	6014	1/18/17	4/17/17	Contig	Cornell University	SAMN05929605	GCA_001955985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/985/GCA_001955985.1_ASM195598v1	-	FSL F4-0087
Syntrophothermus sp. DTU052	1671631	PRJNA283298	283298	Terrabacteria group	Firmicutes	2.2821	51.3	-	LFSS01	114	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03778948	GCA_001512575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/575/GCA_001512575.1_ASM151257v1	26839589	-
Streptomyces olivochromogenes	1963	PRJDB5702	400306	Terrabacteria group	Actinobacteria	11.6396	70.2	-	BDQI01	131	10646	10550	8/25/17	9/23/17	Contig	"Research Institute of Green Science and Technology, Shizuoka University"	SAMD00078848	GCA_002335465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/465/GCA_002335465.1_Solivochromogenes3561_assembly01	-	NBRC 3561
Pelotomaculum sp. DTU098	1671628	PRJNA283298	283298	Terrabacteria group	Firmicutes	2.64268	50.3	-	LFSA01	144	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03778953	GCA_001512635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/635/GCA_001512635.1_ASM151263v1	26839589	-
Halothermothrix sp. UBA3952	1946587	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.65267	40	-	DGDM01	149	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452263	GCA_002385435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/435/GCA_002385435.1_ASM238543v1	28894102	-
Paenibacillus jamilae	114136	PRJNA308167	308167	Terrabacteria group	Firmicutes	5.50536	45	-	LQQX01	180	5078	4783	4/13/16	4/12/17	Contig	University of Malaya	SAMN04387818	GCA_001619755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/755/GCA_001619755.1_ASM161975v1	-	CN9
Fictibacillus sp. GDSW-R2A3	2021314	PRJNA394719	394719	Terrabacteria group	Firmicutes	3.90079	44.2	-	NOII01	110	4032	3880	8/10/17	8/12/17	Scaffold	Institute of Microbial Technology	SAMN07357904	GCA_002245695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/695/GCA_002245695.1_ASM224569v1	-	GDSW-R2A3
Moorella sp. UBA4076	1946960	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.01227	56.7	-	DFYS01	177	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452281	GCA_002383405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/405/GCA_002383405.1_ASM238340v1	28894102	-
Acetobacter senegalensis	446692	PRJNA288385	288385	Proteobacteria	Alphaproteobacteria	3.92878	55.6	-	LHZU01	148	3492	3293	3/7/16	4/12/17	Contig	Ghent University	SAMN03799294	GCA_001580995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/995/GCA_001580995.1_ASM158099v1	-	LMG 23690
Thermus parvatiensis	456163	PRJNA71039	71039	Terrabacteria group	Deinococcus-Thermus	2.0366	68.6	-	AIJQ01	17	2270	1801	3/15/12	4/7/17	Contig	University of Delhi	SAMN02471718	GCA_000252835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/835/GCA_000252835.2_ASM25283v2	22689228	RL
Shigella boydii ATCC 9905	932676	PRJEA60773	60773	Proteobacteria	Gammaproteobacteria	5.12983	50.7	-	AERN01	110	5629	4758	1/27/11	5/19/17	Contig	Virginia Bioinformatics Institute	SAMN02472079	GCA_000193915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/915/GCA_000193915.2_ASM19391v2	-	ATCC 9905
Myroides marinus	703342	PRJNA308309	308309	FCB group	Bacteroidetes/Chlorobi group	4.15844	33.6	-	LQNU01	126	3772	3606	4/13/16	4/12/17	Contig	University of Malaya	SAMN04392944	GCA_001619815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/815/GCA_001619815.1_ASM161981v1	-	L41
Acinetobacter seifertii	1530123	PRJNA319130	319130	Proteobacteria	Gammaproteobacteria	3.88478	38.5	-	LYQI01	120	3712	3553	8/18/16	4/6/17	Contig	University of Florida	SAMN04961001	GCA_001707675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/675/GCA_001707675.1_ASM170767v1	-	KCJK1723
Novosphingobium barchaimii LL02	1114963	PRJNA227256	227256	Proteobacteria	Alphaproteobacteria	5.31347	64	-	JACU01	19	5028	4835	7/2/15	4/11/17	Scaffold	CSIRO	SAMN02727999	GCA_001046635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/635/GCA_001046635.1_N.barLL02	25850427	LL02
Curtobacterium oceanosedimentum	465820	PRJNA278204	278204	Terrabacteria group	Actinobacteria	3.42044	71.7	-	LDRC01	188	3229	3087	12/22/15	4/11/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401369	GCA_001476135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/135/GCA_001476135.1_ASM147613v1	26793183	NS359
Exiguobacterium indicum	296995	PRJNA278187	278187	Terrabacteria group	Firmicutes	3.09509	47.4	-	LDQW01	126	3195	3081	12/22/15	4/11/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401351	GCA_001475695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/695/GCA_001475695.1_ASM147569v1	26793183	RSA42
Pseudomonas weihenstephanensis	1608994	PRJNA274345	274345	Proteobacteria	Gammaproteobacteria	4.79211	57.3	-	JYLF01	32	4475	4297	6/30/15	6/26/17	Contig	"Zentralinstitut fuer Ernaehrungs- und Lebensmittelforschung (ZIEL), WZW, TUM"	SAMN03328806	GCA_001043055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/055/GCA_001043055.1_MG339	26675012	DSM 29166
Halothiobacillus sp. XI15	1766620	PRJNA305178	305178	Proteobacteria	Gammaproteobacteria	2.29285	66.2	-	LOPX01	18	2112	2050	12/18/15	4/11/17	Contig	"Red Sea Research Center, Saudi Arabia"	SAMN04318430	GCA_001469965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/965/GCA_001469965.1_ASM146996v1	-	XI15
Enterobacter xiangfangensis	1296536	PRJNA278426	278426	Proteobacteria	Gammaproteobacteria	4.7318	55.4	-	LDQK01	75	4552	4354	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401398	GCA_001475615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/615/GCA_001475615.1_ASM147561v1	26793183	NS19
Trueperella bernardiae	59561	PRJNA291432	291432	Terrabacteria group	Actinobacteria	2.0482	65.6	-	LGYI01	34	1840	1746	8/11/16	4/13/17	Contig	UCSF	SAMN03944035	GCA_001703655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/703/655/GCA_001703655.1_wgs1	-	LND_65A18
Pseudomonas helleri	1608996	PRJNA274345	274345	Proteobacteria	Gammaproteobacteria	5.86526	58.3	-	JYLE01	167	5377	5129	6/30/15	6/26/17	Contig	"Zentralinstitut fuer Ernaehrungs- und Lebensmittelforschung (ZIEL), WZW, TUM"	SAMN03328805	GCA_001043065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/065/GCA_001043065.1_MG839	26675012	DSM 28141
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA397262	397262	Proteobacteria	Gammaproteobacteria	5.81426	56.9983	chromosome:NZ_CP022691.1/CP022691.1; plasmid pAUSMDU8079-1:NZ_CP022692.1/CP022692.1; plasmid pAUSMDU8079-2:NZ_CP022693.1/CP022693.1; plasmid pAUSMDU8079-3:NZ_CP022694.1/CP022694.1	-	4	5960	5679	8/14/17	8/16/17	Complete Genome	Doherty Applied Microbial Genomics	SAMN07452764	GCA_002249975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/975/GCA_002249975.1_ASM224997v1	-	AUSMDU00008079
Klebsiella pneumoniae	573	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	5.65832	56.9972	chromosome:NZ_CP021955.1/CP021955.1; plasmid unitig_1_pilon:NZ_CP021956.1/CP021956.1; plasmid unitig_3j2_linear_pilon:NZ_CP021957.1/CP021957.1	-	3	5796	5498	6/20/17	6/22/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014948	GCA_002202275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/275/GCA_002202275.1_ASM220227v1	-	AR_0107
Klebsiella pneumoniae	573	PRJNA246471	246471	Proteobacteria	Gammaproteobacteria	5.51354	56.9889	chromosome:CP018352.1; chromosome unnamed :CP018349.1; plasmid pCAV1417-185:CP018351.1; plasmid pCAV1417-67:CP018350.1; plasmid pCAV1417-9294:CP018348.1	-	5	5901	5592	12/13/16	12/13/16	Complete Genome	University of Oxford	SAMN03733765	GCA_001902535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/535/GCA_001902535.1_ASM190253v1	-	CAV1417
Legionella parisiensis	45071	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	4.1704	37.9	-	LNYQ01	13	3699	3550	12/15/15	4/11/17	Scaffold	Tel Aviv University	SAMN04274788	GCA_001467945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/945/GCA_001467945.1_ASM146794v1	26752266	PF-209-C-C2
Legionella jordanis	456	PRJNA281299	281299	Proteobacteria	Gammaproteobacteria	3.08735	41.7	-	LBAX01	28	2813	2724	5/19/16	4/12/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03486956	GCA_001648675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/675/GCA_001648675.1_ASM164867v1	-	ATCC 33623
Legionella maceachernii	466	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	3.60032	40.5	-	LNYL01	54	3228	3070	12/15/15	4/11/17	Scaffold	Tel Aviv University	SAMN04274783	GCA_001467845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/845/GCA_001467845.1_ASM146784v1	26752266	PX-1-G2-E2
Legionella jamestowniensis	455	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	3.34147	39.5	-	LNYG01	13	2964	2869	12/15/15	4/11/17	Scaffold	Tel Aviv University	SAMN04274779	GCA_001467745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/745/GCA_001467745.1_ASM146774v1	26752266	JA-26-G1-E2
Paenibacillus naphthalenovorans	162209	PRJEB15954	348225	Terrabacteria group	Firmicutes	5.28974	50	-	FNDY01	99	5209	4979	10/20/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421868	GCA_900099895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/895/GCA_900099895.1_IMG-taxon_2675903031_annotated_assembly	-	PR-N1
Fluoribacter gormanii	464	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	3.82006	38.1	-	LNYD01	41	3342	3204	12/15/15	4/11/17	Scaffold	Tel Aviv University	SAMN04274775	GCA_001467685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/685/GCA_001467685.1_ASM146768v1	26752266	LS-13
Klebsiella pneumoniae	573	PRJNA298912	298912	Proteobacteria	Gammaproteobacteria	5.68063	56.9887	chromosome:NZ_CP012987.1/CP012987.1; plasmid pKp02a:NZ_CP012989.1/CP012989.1; plasmid pKp03a:NZ_CP012990.1/CP012990.1; plasmid pKp04a:NZ_CP012991.1/CP012991.1; plasmid pKpN01-CTX:NZ_CP012988.3/CP012988.3	-	5	5777	5472	12/3/15	2/21/17	Complete Genome	Calgary Laboratory Services	SAMN04168649	GCA_001456055.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/055/GCA_001456055.3_ASM145605v3	-	KpN01
Legionella feeleii	453	PRJNA281296	281296	Proteobacteria	Gammaproteobacteria	3.52915	41	-	LBHK01	127	3270	3149	5/19/16	4/12/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03486951	GCA_001648615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/615/GCA_001648615.1_ASM164861v1	-	ATCC 35072
bacterium 2013Arg42i	1561003	PRJEB7439	304961	unclassified Bacteria	unclassified Bacteria (miscellaneous)	4.85458	39	-	FLSL01	691	3844	3515	6/22/16	8/1/17	Scaffold	Functional Genomics Genter Zurich	SAMEA2826833	GCA_900091325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/325/GCA_900091325.1_2013Arg13.con	-	2013Arg13
nitrifying bacterium enrichment culture	1648056	PRJEB10139	302401	environmental samples	nitrifying bacterium enrichment culture	12.846	65.6	-	CZJZ01	161	-	-	11/14/15	11/14/15	Contig	AALBORG UNIVERSITY	SAMEA3498365	GCA_001458755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/755/GCA_001458755.1_ENR4_AEF_assembly	-	-
Fluoribacter bozemanae	447	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	4.12431	37.9	-	LNXU01	61	3690	3498	12/15/15	4/11/17	Scaffold	Tel Aviv University	SAMN04274766	GCA_001467045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/045/GCA_001467045.1_ASM146704v1	26752266	WIGA
Nitrospira sp. OLB3	1617410	PRJNA274364	274364	Nitrospirae	Nitrospira	3.75426	60.4	-	JZQY01	79	3778	3743	2/24/16	4/19/16	Contig	Radboud University Nijmegen	SAMN03372523	GCA_001567445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/445/GCA_001567445.1_ASM156744v1	27029554	-
Tropicibacter multivorans	928856	PRJEB17204	351405	Proteobacteria	Alphaproteobacteria	4.149	59.7	-	FOMC01	41	3881	3764	10/30/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488049	GCA_900112515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/515/GCA_900112515.1_IMG-taxon_2615840706_annotated_assembly	-	DSM 26470
Tropicibacter naphthalenivorans	441103	PRJEB10721	301582	Proteobacteria	Alphaproteobacteria	4.45938	63.2	-	CYSE01	33	4205	4068	11/9/15	4/16/17	Scaffold	UVEG	SAMEA3532112	GCA_001458375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/375/GCA_001458375.1_Tr.naphthalenivorans_CECT7648_Spades_Prokka	-	CECT 7648
Thalassobius gelatinovorus	53501	PRJEB17006	351163	Proteobacteria	Alphaproteobacteria	3.9571	58.5	-	FOFW01	27	3831	3721	10/29/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488043	GCA_900111045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/045/GCA_900111045.1_IMG-taxon_2622736435_annotated_assembly	-	DSM 5887
Thalassobius sp. CECT 5113	1715691	PRJEB10703	301516	Proteobacteria	Alphaproteobacteria	3.36207	54.4	-	CYTO01	26	3316	3200	11/8/15	4/11/17	Scaffold	UVEG	SAMEA3542138	GCA_001458335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/335/GCA_001458335.1_Thalassobius_sp._CECT5113_Velvet_Prokka	-	CECT 5113
Thalassobius mediterraneus	340021	PRJEB10710	301519	Proteobacteria	Alphaproteobacteria	4.35915	59.8	-	CYSB01	48	4163	4047	11/8/15	4/11/17	Contig	UVEG	SAMEA3531082	GCA_001458255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/255/GCA_001458255.1_Tmediterraneus_CECT5118_Spades_Prokka	-	CECT 5118
Ruegeria atlantica	81569	PRJEB10679	301121	Proteobacteria	Alphaproteobacteria	4.82594	56.5	-	CYPS01	67	4716	4498	11/6/15	4/11/17	Contig	UVEG	SAMEA3522225	GCA_001458095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/095/GCA_001458095.1_R.atlanticaCECT4293_SeqMan_Prokka	-	CECT 4293
Fictibacillus enclensis	1017270	PRJEB15017	336303	Terrabacteria group	Firmicutes	4.5009	44.3	-	FMAV01	10	4624	4458	8/3/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487808	GCA_900094955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/955/GCA_900094955.1_IMG-taxon_2616645019_annotated_assembly	-	NIO-1003
Arthrobacter enclensis	993070	PRJEB15014	336306	Terrabacteria group	Actinobacteria	4.22623	67.1	-	FMAZ01	18	3909	3777	8/3/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487801	GCA_900094675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/675/GCA_900094675.1_IMG-taxon_2615840696_annotated_assembly	-	NIO-1008
Rhodococcus enclensis	1049584	PRJEB15019	336301	Terrabacteria group	Actinobacteria	7.47874	62.3	-	FMBB01	76	7098	6826	8/3/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487806	GCA_900094765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/765/GCA_900094765.1_IMG-taxon_2615840625_annotated_assembly	-	NIO-1009
Microbacterium enclense	993073	PRJEB15469	343910	Terrabacteria group	Actinobacteria	3.6665	70.3	-	FMYG01	15	3374	3256	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216418	GCA_900096885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/096/885/GCA_900096885.1_IMG-taxon_2616644834_annotated_assembly	-	NIO-1002
Bacillus enclensis	1402860	PRJEB15016	336304	Terrabacteria group	Firmicutes	4.48199	44.5	-	FMAU01	18	4493	4345	8/3/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487807	GCA_900094975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/975/GCA_900094975.1_IMG-taxon_2617270721_annotated_assembly	-	SGD-1123
Exiguobacterium enclense	1017277	PRJEB15474	343905	Terrabacteria group	Firmicutes	3.25281	46.8	-	FMYN01	11	3349	3251	10/20/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216342	GCA_900096925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/096/925/GCA_900096925.1_IMG-taxon_2616645037_annotated_assembly	-	NIO-1109
Klebsiella pneumoniae	573	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	5.77948	56.9764	chromosome:NZ_CP018816.1/CP018816.1; plasmid unitig_1:NZ_CP018817.1/CP018817.1; plasmid unitig_2:NZ_CP018818.1/CP018818.1; plasmid unitig_3:NZ_CP018819.1/CP018819.1	-	4	5913	5636	12/27/16	2/22/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014890	GCA_001922465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/465/GCA_001922465.1_ASM192246v1	-	AR_0049
Klebsiella pneumoniae	573	PRJNA183901	183901	Proteobacteria	Gammaproteobacteria	5.7815	56.9738	chromosome 1:NZ_CP006659.2/CP006659.2; plasmid pCuAs:NZ_CP006663.1/CP006663.1; plasmid pHg:NZ_CP006662.2/CP006662.2; plasmid pMYS:NZ_CP006660.1/CP006660.1; plasmid pNDM-US:NZ_CP006661.1/CP006661.1	-	5	5922	5645	2/5/14	2/21/17	Complete Genome	Sandia National Laboratories	SAMN02152539	GCA_000364385.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/385/GCA_000364385.3_ASM36438v3	24905728	ATCC BAA-2146
Mycobacterium saopaulense	1578165	PRJNA347845	347845	Terrabacteria group	Actinobacteria	5.00861	64.5	-	MLIC01	67	5057	4863	10/26/16	4/13/17	Contig	University of Georgia	SAMN05897984	GCA_001853625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/625/GCA_001853625.1_ASM185362v1	-	8489
Leptospira mayottensis 200901116	1192864	PRJNA167259	167259	Spirochaetes	Spirochaetia	4.13528	39.5	-	AKWB02	67	3950	3570	10/17/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436412	GCA_000306675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/675/GCA_000306675.2_gls454190v02	25249563	200901116
Nitrosomonas ureae	44577	PRJEB22288	400885	Proteobacteria	Betaproteobacteria	3.06429	44.6	chromosome I:LT907782.1	-	1	2939	2761	9/6/17	9/6/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN06296273	GCA_900206265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/206/265/GCA_900206265.1_IMG-taxon_2724679738_annotated_assembly	-	Nm15
Armatimonadetes bacterium DC	1661583	PRJNA285316	285316	Terrabacteria group	Armatimonadetes	2.85221	60.5	-	LDYB01	26	-	-	11/12/15	11/12/15	Scaffold	Joint Genome Institute	SAMN03743790	GCA_001442985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/985/GCA_001442985.1_ASM144298v1	-	-
Armatimonadetes bacterium GXS	1661582	PRJNA285314	285314	Terrabacteria group	Armatimonadetes	2.91866	60.6	-	LDYA01	46	-	-	11/12/15	11/12/15	Scaffold	Joint Genome Institute	SAMN03743788	GCA_001442965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/965/GCA_001442965.1_ASM144296v1	-	-
endosymbiont of Ridgeia piscesae	54398	PRJNA283904	283904	Proteobacteria	Gammaproteobacteria	3.44202	58.9	-	LDXT01	86	3143	2930	11/13/15	6/15/17	Scaffold	University of Victoria	SAMN03657162	GCA_001443665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/443/665/GCA_001443665.1_ASM144366v1	27316954	-
Armatimonadetes bacterium GBS	1661580	PRJNA285317	285317	Terrabacteria group	Armatimonadetes	2.68057	60.6	-	LDXZ01	120	-	-	11/12/15	11/12/15	Scaffold	Joint Genome Institute	SAMN03742521	GCA_001442875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/875/GCA_001442875.1_ASM144287v1	-	-
Bacillus glycinifermentans	1664069	PRJNA285749	285749	Terrabacteria group	Firmicutes	4.78787	45.6	-	LECW02	82	5059	4712	6/29/15	4/11/17	Scaffold	NCAUR-ARS-USDA	SAMN03758654	GCA_001042475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/475/GCA_001042475.2_ASM104247v2	26297378	GO-13
Klebsiella pneumoniae	573	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	5.85968	56.9712	chromosome:NZ_CP021549.1/CP021549.1; plasmid tig00000000:NZ_CP021544.1/CP021544.1; plasmid tig00000001:NZ_CP021545.1/CP021545.1; plasmid tig00000002:NZ_CP021546.1/CP021546.1; plasmid tig00000003:NZ_CP021547.1/CP021547.1; plasmid tig00000005:NZ_CP021548.1/CP021548.1	-	6	6027	5733	6/8/17	6/10/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014953	GCA_002180155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/155/GCA_002180155.1_ASM218015v1	-	AR_0112
Candidatus Kryptobacter tengchongensis	1643429	PRJEB11727	301876	FCB group	Candidatus Kryptonia	1.80106	36.4	-	CZVU01	162	1795	1563	11/11/15	4/4/17	Scaffold	DOE - Joint Genome Institute	SAMN03436190	GCA_001458495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/495/GCA_001458495.1_JGI_assembly	-	JGI-24
Alishewanella sp. HH-ZS	1856684	PRJNA324189	324189	Proteobacteria	Gammaproteobacteria	3.53159	51	-	LZEJ01	114	3319	3172	8/12/16	4/13/17	Contig	University of Huddersfield	SAMN05197887	GCA_001704375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/375/GCA_001704375.1_ASM170437v1	-	HH-ZS
Roseovarius indicus	540747	PRJNA321723	321723	Proteobacteria	Alphaproteobacteria	5.51142	64.8	-	LXYQ01	168	5369	5179	5/24/16	4/12/17	Scaffold	University of Alberta	SAMN04965936	GCA_001650975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/975/GCA_001650975.1_ASM165097v1	-	EhC03
Bradyrhizobium lablabi	722472	PRJEB16411	349362	Proteobacteria	Alphaproteobacteria	8.26957	62.3	-	FNTI01	2	7822	7504	10/22/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444171	GCA_900104755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/755/GCA_900104755.1_IMG-taxon_2693429786_annotated_assembly	-	GAS522
Bradyrhizobium valentinum	1518501	PRJNA241372	241372	Proteobacteria	Alphaproteobacteria	9.14648	61.9	-	LLXY01	242	8718	8034	11/6/15	4/11/17	Contig	UPM	SAMN02689486	GCA_001440385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/385/GCA_001440385.1_ASM144038v1	-	LmjM6
Bacillus muralis	264697	PRJNA299360	299360	Terrabacteria group	Firmicutes	5.1913	41	-	LMBV01	101	4893	4671	11/6/15	4/11/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04198268	GCA_001439925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/925/GCA_001439925.1_ASM143992v1	26847897	DSM 16288
Pediococcus ethanolidurans	319653	PRJEB17023	351207	Terrabacteria group	Firmicutes	2.2763	37.2	-	FOGK01	51	2232	2091	10/29/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487973	GCA_900111205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/205/GCA_900111205.1_IMG-taxon_2617270883_annotated_assembly	-	CGMCC 1.3889
Pseudomonas orientalis	76758	PRJNA274345	274345	Proteobacteria	Gammaproteobacteria	6.18864	60.5	-	JYLM01	39	5630	5408	11/6/15	4/11/17	Contig	"Zentralinstitut fuer Ernaehrungs- und Lebensmittelforschung (ZIEL), WZW, TUM"	SAMN03328802	GCA_001439815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/815/GCA_001439815.1_G8783	-	DSM 17489
Klebsiella pneumoniae	573	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	5.84984	56.9658	chromosome:NZ_CP021751.1/CP021751.1; plasmid unitig_1:NZ_CP021752.1/CP021752.1; plasmid unitig_2:NZ_CP021753.1/CP021753.1; plasmid unitig_3:NZ_CP021754.1/CP021754.1; plasmid unitig_4:NZ_CP021755.1/CP021755.1; plasmid unitig_5:NZ_CP021756.1/CP021756.1	-	6	6013	5730	6/13/17	6/15/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014954	GCA_002192335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/335/GCA_002192335.1_ASM219233v1	-	AR_0113
Aneurinibacillus sp. UBA3580	1946041	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.56354	47.1	-	DFMZ01	137	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452539	GCA_002375825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/825/GCA_002375825.1_ASM237582v1	28894102	-
Acidimicrobium sp. BACL19 MAG-120924-bin39	1655566	PRJNA273799	273799	Terrabacteria group	Actinobacteria	1.25847	58.1	-	LIAQ01	496	1485	1092	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741951	GCA_001438945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/945/GCA_001438945.1_ASM143894v1	-	-
Pediococcus inopinatus	114090	PRJDB2940	317444	Terrabacteria group	Firmicutes	2.06853	38.6	-	BBIM01	62	2051	1921	7/17/14	4/12/17	Contig	World Institute of Kimchi	SAMD00018420	GCA_001641385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/385/GCA_001641385.1_ASM164138v1	-	Wikim15
Weissella viridescens	1629	PRJEB10916	303074	Terrabacteria group	Firmicutes	1.55907	41.3	-	CYXF01	243	1621	1451	11/23/15	4/11/17	Scaffold	UNIVERSITY OF OSLO	SAMEA3546114	GCA_001460875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/460/875/GCA_001460875.1_Wvi	-	NCDO 1655
Lactobacillus selangorensis	81857	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.1818	46.3	-	JQAT01	100	2201	2072	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02797769	GCA_001436805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/805/GCA_001436805.1_ASM143680v1	26415554	ATCC BAA-66
Lactobacillus sunkii	481719	PRJNA313308	313308	Terrabacteria group	Firmicutes	2.79464	42	-	MIQE01	40	2677	2612	10/11/16	4/13/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04518065	GCA_001766745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/745/GCA_001766745.1_ASM176674v1	-	CG_D
Lactobacillus parakefiri	152332	PRJNA375758	375758	Terrabacteria group	Firmicutes	2.49515	43.6	-	NCXA01	236	2380	2178	8/29/17	8/30/17	Contig	SysMilk	SAMN06718496	GCA_002276885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/885/GCA_002276885.1_ASM227688v1	-	KR
Lactobacillus aviarius subsp. araffinosus DSM 20653	1423820	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.47526	38.1	-	AYYZ01	31	1445	1377	11/6/15	4/4/17	Scaffold	Shanghai Majorbio	SAMN02369423	GCA_001435375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/375/GCA_001435375.1_ASM143537v1	26415554	DSM 20653
Lactobacillus taiwanensis	508451	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.24872	34.1	-	NGNV01	65	2324	2083	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848435	GCA_002253025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/025/GCA_002253025.1_ASM225302v1	-	609u
Lactobacillus parabuchneri DSM 5707 = NBRC 107865	1423784	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.5661	43.4	-	AZGK01	50	2421	2301	11/6/15	4/4/17	Scaffold	Shanghai Majorbio	SAMN02369410	GCA_001435315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/315/GCA_001435315.1_ASM143531v1	26415554	DSM 5707
Lactobacillus zymae DSM 19395	1423817	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.7045	53.6	-	AZDW01	59	2521	2417	11/6/15	4/16/17	Scaffold	Shanghai Majorbio	SAMN02369498	GCA_001434115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/115/GCA_001434115.1_ASM143411v1	26415554	DSM 19395
Ferrovum sp. Z-31	1789004	PRJNA305479	305479	Proteobacteria	Betaproteobacteria	2.47304	54.3	-	LRRD01	212	2536	2353	3/8/16	4/12/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04325951	GCA_001581915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/915/GCA_001581915.1_ASM158191v1	-	Z-31
Stenotrophomonas nitritireducens	83617	PRJNA284361	284361	Proteobacteria	Gammaproteobacteria	3.98349	68.3	-	LDJG01	95	3541	3433	11/4/15	4/11/17	Contig	CSIR-Institute of Microbial Technology	SAMN03701629	GCA_001431425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/425/GCA_001431425.1_ASM143142v1	27014232	DSM 12575
Curvibacter sp. PAE-UM	1714344	PRJNA295253	295253	Proteobacteria	Betaproteobacteria	3.63266	65.5	-	LKCX01	4	3490	3386	11/5/15	4/11/17	Scaffold	Nankai University	SAMN04044569	GCA_001432305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/305/GCA_001432305.1_ASM143230v1	26769923	PAE-UM
Stenotrophomonas pavanii	487698	PRJNA390523	390523	Proteobacteria	Gammaproteobacteria	4.7839	67	-	NIXP01	158	4504	4320	6/22/17	6/26/17	Contig	JCVI	SAMN07237138	GCA_002205885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/885/GCA_002205885.1_ASM220588v1	-	S18795
Oerskovia sp. Root22	1736494	PRJNA297942	297942	Terrabacteria group	Actinobacteria	4.6224	72.2	-	LMIL01	14	4041	3897	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155763	GCA_001429135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/135/GCA_001429135.1_Root22	26633631	Root22
Klebsiella pneumoniae	573	PRJNA329409	329409	Proteobacteria	Gammaproteobacteria	5.62773	56.9613	chromosome:NZ_CP018735.1/CP018735.1; plasmid pKp_Goe_641-1:NZ_CP018737.1/CP018737.1; plasmid pKp_Goe_641-2:NZ_CP018736.1/CP018736.1; plasmid pKp_Goe_641-3:NZ_CP018738.1/CP018738.1; plasmid pKp_Goe_641-4:NZ_CP018740.1/CP018740.1; plasmid pKp_Goe_641-5:NZ_CP018739.1/CP018739.1	-	6	5675	5390	12/21/16	2/22/17	Complete Genome	University Medical Center Goettingen	SAMN05412452	GCA_001913175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/175/GCA_001913175.1_ASM191317v1	-	Kp_Goe_121641
Altererythrobacter sp. Root672	1736584	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	3.69246	63.9	-	LMHH01	5	3582	3503	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04155853	GCA_001427865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/865/GCA_001427865.1_Root672	26633631	Root672
Phycicoccus sp. Soil748	1736397	PRJNA298127	298127	Terrabacteria group	Actinobacteria	3.9743	71.9	-	LMSC01	12	3749	3627	11/2/15	4/11/17	Scaffold	ETH Zurich	SAMN04155662	GCA_001428025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/025/GCA_001428025.1_Soil748	26633631	Soil748
Yonghaparkia sp. Soil809	1736417	PRJNA298127	298127	Terrabacteria group	Actinobacteria	2.59155	71.9	-	LMSV01	2	2471	2373	11/2/15	4/11/17	Scaffold	ETH Zurich	SAMN04155682	GCA_001429705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/705/GCA_001429705.1_Soil809	26633631	Soil809
Geodermatophilus sp. DSM 45219	1881103	PRJEB16245	348965	Terrabacteria group	Actinobacteria	4.96859	74.6	-	FNIQ01	12	4757	4591	10/20/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428965	GCA_900104025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/025/GCA_900104025.1_IMG-taxon_2687453773_annotated_assembly	-	DSM 45219
Dyadobacter sp. SG02	1855291	PRJEB16793	350911	FCB group	Bacteroidetes/Chlorobi group	8.48145	50.2	-	FNYL01	37	7009	6863	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216327	GCA_900109045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/045/GCA_900109045.1_IMG-taxon_2609459762_annotated_assembly	-	SG02
Frondihabitans sp. Leaf304	1736329	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.45377	67.6	-	LMNV01	5	3204	3120	11/2/15	4/17/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151719	GCA_001423105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/105/GCA_001423105.1_Leaf304	26633631	Leaf304
Phenylobacterium sp. Root77	1736599	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	4.26002	68	-	LMIM01	9	4143	4044	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155868	GCA_001428705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/705/GCA_001428705.1_Root77	26633631	Root77
Aureimonas sp. Leaf460	1736384	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	5.4215	67	-	LMQY01	76	5084	4893	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151774	GCA_001425525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/525/GCA_001425525.1_Leaf460	26633631	Leaf460
Rathayibacter sp. Leaf294	1736326	PRJNA297956	297956	Terrabacteria group	Actinobacteria	4.10825	71.2	-	LMNO01	10	3888	3783	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151716	GCA_001423005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/005/GCA_001423005.1_Leaf294	26633631	Leaf294
Pseudorhodoferax sp. Leaf265	1736315	PRJNA297956	297956	Proteobacteria	Betaproteobacteria	7.47608	69.1	-	LMMT01	40	6893	6699	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151705	GCA_001422365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/365/GCA_001422365.1_Leaf265	26633631	Leaf265
Agromyces sp. Leaf222	1735688	PRJNA297956	297956	Terrabacteria group	Actinobacteria	4.42805	70.6	-	LMKQ01	4	3952	3836	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151687	GCA_001421565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/565/GCA_001421565.1_Leaf222	26633631	Leaf222
Agreia sp. Leaf283	1736321	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.97845	67.6	-	LMNF01	4	3723	3637	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151711	GCA_001422485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/485/GCA_001422485.1_Leaf283	26633631	Leaf283
Plantibacter sp. Leaf171	1736284	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.8937	69.7	-	LMPA01	5	3619	3520	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151664	GCA_001423725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/725/GCA_001423725.1_Leaf171	26633631	Leaf171
Bordetella pseudohinzii	1331258	PRJNA202161	202161	Proteobacteria	Betaproteobacteria	4.53852	66.6	-	JHEP02	48	4256	4130	4/30/14	4/10/17	Contig	JCVI	SAMN02263900	GCA_000657795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/795/GCA_000657795.2_gbh03v02	-	8-296-03
Psychrobacillus sp. OK028	1884359	PRJEB16219	349000	Terrabacteria group	Firmicutes	3.75719	36.6	-	FNHY01	21	3698	3588	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05518871	GCA_900103605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/605/GCA_900103605.1_IMG-taxon_2687453675_annotated_assembly	-	OK028
Bosea thiooxidans	53254	PRJNA299705	299705	Proteobacteria	Alphaproteobacteria	5.46091	67.3	-	LMAR01	98	5191	5009	10/29/15	4/11/17	Contig	Tianjin University	SAMN04212082	GCA_001420315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/315/GCA_001420315.1_ASM142031v1	-	CGMCC 9174
Streptomyces silaceus	545123	PRJNA293375	293375	Terrabacteria group	Actinobacteria	8.74414	72.1	-	LIRJ01	732	7891	7134	10/29/15	3/12/17	Scaffold	USDA/ARS/NCAUR	SAMN04004092	GCA_001419745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/745/GCA_001419745.1_ASM141974v1	-	NRRL B-24166
Streptomyces prasinopilosus	67344	PRJNA293375	293375	Terrabacteria group	Actinobacteria	6.441	72.6	-	LIQM01	1027	6021	5059	10/28/15	9/5/17	Scaffold	USDA/ARS/NCAUR	SAMN04003992	GCA_001418395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/395/GCA_001418395.1_ASM141839v1	-	NRRL B-24621
Streptomyces prasinus	67345	PRJNA293375	293375	Terrabacteria group	Actinobacteria	7.4336	72.1	-	LIRH01	860	6619	5764	10/29/15	3/12/17	Scaffold	USDA/ARS/NCAUR	SAMN04004089	GCA_001419705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/705/GCA_001419705.1_ASM141970v1	-	NRRL B-2712
Kocuria kristinae	37923	PRJNA294377	294377	Terrabacteria group	Actinobacteria	2.35613	71.8	-	LJBJ02	47	2101	1957	10/29/15	4/5/17	Contig	Rhodes University	SAMN04025229	GCA_001420025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/025/GCA_001420025.2_ASM142002v2	-	RUTW2-3
Streptomyces puniciscabiei	164348	PRJNA293375	293375	Terrabacteria group	Actinobacteria	8.80712	71.3	-	LIRI01	631	8375	7441	10/29/15	3/12/17	Scaffold	USDA/ARS/NCAUR	SAMN04004090	GCA_001419685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/685/GCA_001419685.1_ASM141968v1	-	NRRL B-24456
Streptomyces hirsutus	35620	PRJNA293375	293375	Terrabacteria group	Actinobacteria	8.5063	71	-	LIQT01	783	7981	6902	10/28/15	3/12/17	Scaffold	USDA/ARS/NCAUR	SAMN04004080	GCA_001418415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/415/GCA_001418415.1_ASM141841v1	-	NRRL B-2713
Thermococcus thioreducens	277988	PRJNA293782	293782	Euryarchaeota	Thermococci	2.05248	53.5	-	LIXN01	41	2314	2075	10/28/15	4/11/17	Contig	"Kyungpook National University, Shin's Lab."	SAMN04011897	GCA_001418715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/715/GCA_001418715.1_ASM141871v1	-	DSM 14981
Duganella sp. Root1480D1	1736471	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	6.60392	62	-	LMFZ01	50	6105	5947	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155740	GCA_001427305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/305/GCA_001427305.1_Root1480D1	26633631	Root1480D1
Streptomyces griseoruber	1943	PRJNA299232	299232	Terrabacteria group	Actinobacteria	10.2179	71.6	-	LMWW01	88	9218	8554	1/13/16	3/12/17	Scaffold	Bielefeld University	SAMN04193353	GCA_001514205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/205/GCA_001514205.1_ASM151420v1	-	DSM 40281
Streptomyces diastatochromogenes	42236	PRJNA309834	309834	Terrabacteria group	Actinobacteria	12.3318	70.1	-	LRTP01	1280	11751	9979	2/5/16	3/12/17	Contig	University of Florida	SAMN04440795	GCA_001550305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/550/305/GCA_001550305.1_ASM155030v1	-	ATCC 12309
Streptomyces alboniger	132473	PRJNA293375	293375	Terrabacteria group	Actinobacteria	7.54739	71.1	-	LIQN01	578	-	-	10/28/15	10/28/15	Scaffold	USDA/ARS/NCAUR	SAMN04002384	GCA_001418385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/385/GCA_001418385.1_ASM141838v1	-	NRRL B-1832
Idiomarina woesei	1381080	PRJEB10552	293955	Proteobacteria	Gammaproteobacteria	2.43775	47.8	-	CYHB01	16	2353	2269	8/27/15	4/11/17	Scaffold	DOE - Joint Genome Institute	SAMN03840628	GCA_001517265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/265/GCA_001517265.1_JGI_assembly	-	DSM 27808
Thiomonas bhubaneswarensis	339866	PRJEB10557	293960	Proteobacteria	Betaproteobacteria	3.20343	65.1	-	CYHF01	23	3103	2974	8/27/15	4/11/17	Scaffold	DOE - Joint Genome Institute	SAMN03840739	GCA_001517285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/285/GCA_001517285.1_JGI_assembly	-	DSM 18181
Tepidiphilus thermophilus	876478	PRJEB10558	293961	Proteobacteria	Hydrogenophilalia	2.25982	66.2	-	CYHH01	35	2248	2127	8/27/15	6/20/17	Scaffold	DOE - Joint Genome Institute	SAMN03840742	GCA_001517365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/365/GCA_001517365.1_JGI_assembly	-	JCM 19170
Pannonibacter indicus	466044	PRJEB10559	293962	Proteobacteria	Alphaproteobacteria	4.17068	63.5	-	CYHE01	36	3853	3674	8/27/15	4/11/17	Scaffold	DOE - Joint Genome Institute	SAMN03801379	GCA_001517385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/385/GCA_001517385.1_JGI_assembly	-	DSM 23407
Marinomonas fungiae	1137284	PRJEB10556	293959	Proteobacteria	Gammaproteobacteria	4.18925	46.2	-	CYHG01	36	3926	3776	8/27/15	4/11/17	Scaffold	DOE - Joint Genome Institute	SAMN03840741	GCA_001517305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/305/GCA_001517305.1_JGI_assembly	-	JCM 18476
Anoxybacillus suryakundensis	1325335	PRJEB10551	293954	Terrabacteria group	Firmicutes	2.59466	41.5	-	CYGZ01	41	2754	2586	8/27/15	4/11/17	Scaffold	DOE - Joint Genome Institute	SAMN03840601	GCA_001517225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/225/GCA_001517225.1_JGI_assembly	-	DSM 27374
Gulbenkiania indica	375574	PRJEB10555	293958	Proteobacteria	Betaproteobacteria	2.848	63.6	-	CYHA01	20	2773	2673	8/27/15	4/11/17	Scaffold	DOE - Joint Genome Institute	SAMN03840682	GCA_001517245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/245/GCA_001517245.1_JGI_assembly	-	DSM 17901
Chelatococcus sambhunathii	363953	PRJEB10554	293957	Proteobacteria	Alphaproteobacteria	4.37382	67.8	-	CYHC01	35	4166	4016	8/27/15	4/11/17	Scaffold	DOE - Joint Genome Institute	SAMN03840667	GCA_001517345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/345/GCA_001517345.1_JGI_assembly	-	DSM 18167
Nonlabens sp. Hel1_33_55	1336802	PRJEB15769	347740	FCB group	Bacteroidetes/Chlorobi group	3.25396	39.5	chromosome I:NZ_LT627735.1/LT627735.1	-	1	2900	2842	10/17/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05192588	GCA_900101765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/765/GCA_900101765.1_IMG-taxon_2667527234_annotated_assembly	-	Hel1_33_55
Mycobacterium gordonae	1778	PRJNA297469	297469	Terrabacteria group	Actinobacteria	7.55232	66.8	-	LKTM01	377	6965	6498	10/28/15	4/11/17	Contig	Central Tuberculosis Research Institute	SAMN04123344	GCA_001417955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/955/GCA_001417955.2_ASM141795v2	-	CTRI 14-8773
Candidatus Symbiothrix dinenymphae	467085	PRJDB3425	293966	FCB group	Bacteroidetes/Chlorobi group	3.51998	45.6	-	BBRT01	346	2347	2302	8/25/15	4/14/16	Contig	"Microbe Division (RIKEN BRC JCM), RIKEN BioResource Center"	SAMD00024442	GCA_001417715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/715/GCA_001417715.1_ASM141771v1	26079531	B4-10h
Klebsiella pneumoniae	573	PRJNA329409	329409	Proteobacteria	Gammaproteobacteria	5.65566	56.9603	chromosome:NZ_CP018447.1/CP018447.1; plasmid pKp_Goe_208-1:NZ_CP018448.1/CP018448.1; plasmid pKp_Goe_208-2:NZ_CP018449.1/CP018449.1	-	3	5716	5429	12/13/16	2/21/17	Complete Genome	University Medical Center Goettingen	SAMN05412455	GCA_001902435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/435/GCA_001902435.1_ASM190243v1	-	Kp_Goe_33208
Pyrodictium delaneyi	1273541	PRJNA382239	382239	TACK group	Crenarchaeota	2.0428	53.9	-	NCQP01	9	2093	2017	6/15/17	6/19/17	Contig	Michigan State University	SAMN06702682	GCA_002194565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/565/GCA_002194565.1_Pdsh-A1.0	-	Hulk
Lachnospira pectinoschiza	28052	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.03522	36.5	-	CZAK01	21	2783	2663	10/1/15	4/11/17	Contig	SC	SAMEA3545350	GCA_001406555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/555/GCA_001406555.1_14207_7_9	-	2789STDY5834886
Methanosaeta sp. ASP1-1	1917475	PRJNA338276	338276	Euryarchaeota	Methanomicrobia	0.711459	55.1	-	NOLF01	185	882	882	8/16/17	8/16/17	Contig	The Ohio State University	SAMN05908752	GCA_002256605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/605/GCA_002256605.1_ASM225660v1	-	-
Candidatus Cloacimonas sp. 4484_140	1956163	PRJNA362212	362212	FCB group	Candidatus Cloacimonetes	1.10573	38.5	-	MVCT01	125	1108	1019	3/20/17	3/20/17	Contig	The University of Texas at Austin	SAMN06288060	GCA_002049945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/945/GCA_002049945.1_ASM204994v1	-	-
Flavobacterium aquidurense	362413	PRJNA354433	354433	FCB group	Bacteroidetes/Chlorobi group	5.72443	34.7	-	MUGR01	88	4941	4813	7/12/17	7/14/17	Scaffold	FDA	SAMN06049052	GCA_002217195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/195/GCA_002217195.1_ASM221719v1	-	DSM 18293
Clostridium ventriculi	1267	PRJDB4385	305500	Terrabacteria group	Firmicutes	2.47423	27.2	-	BCMV01	91	2334	2226	12/8/15	4/11/17	Contig	"Animal Science, Graduate School of Life and Environmental Sciences, Kyoto Prefectural University"	SAMD00043588	GCA_001485165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/165/GCA_001485165.1_ASM148516v1	26847899	14
Fusicatenibacter saccharivorans	1150298	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.79852	46.9	-	CZBB01	62	3651	3439	10/1/15	4/11/17	Contig	SC	SAMEA3545386	GCA_001404555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/555/GCA_001404555.1_14207_7_46	-	2789STDY5834923
Jannaschia rubra	282197	PRJEB17300	351529	Proteobacteria	Alphaproteobacteria	3.55265	67.9	-	FOOS01	23	3501	3377	10/31/16	4/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488517	GCA_900113265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/265/GCA_900113265.1_IMG-taxon_2622736430_annotated_assembly	-	DSM 16279
Clostridium disporicum	84024	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.80483	27.9	-	CYZV01	119	3563	3407	10/1/15	4/11/17	Contig	SC	SAMEA3545321	GCA_001404355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/355/GCA_001404355.1_13470_2_74	-	2789STDY5834855
Labrenzia alba	311410	PRJEB10058	297537	Proteobacteria	Alphaproteobacteria	6.90169	56.4	-	CXWE01	32	6382	6238	10/1/15	4/11/17	Scaffold	UVEG	SAMEA3495629	GCA_001404515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/515/GCA_001404515.1_L.albaCECT5095_Spades_Prokka	-	CECT 5095
Pseudomonas syringae pv. tagetis	129140	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	6.0424	58.2	-	LJRM01	208	5691	5297	10/20/15	4/11/17	Scaffold	University of Toronto	SAMN03976254	GCA_001401315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/315/GCA_001401315.1_PtgICMP4091	-	ICMP4091
Klebsiella pneumoniae	573	PRJNA329409	329409	Proteobacteria	Gammaproteobacteria	5.65894	56.9579	chromosome:NZ_CP018450.1/CP018450.1; plasmid pKp_Goe_070-1:NZ_CP018451.1/CP018451.1; plasmid pKp_Goe_070-2:NZ_CP018452.1/CP018452.1; plasmid pKp_Goe_070-3:NZ_CP018453.1/CP018453.1	-	4	5723	5434	12/13/16	2/21/17	Complete Genome	University Medical Center Goettingen	SAMN05412456	GCA_001902515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/515/GCA_001902515.1_ASM190251v1	-	Kp_Goe_71070
Mycobacterium peregrinum	43304	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.75121	66.3	-	LZSY01	206	6554	6257	6/17/16	4/12/17	Contig	JCVI	SAMN04696139	GCA_001665625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/625/GCA_001665625.1_ASM166562v1	-	852002-10433_SCH5171157
Vibrio hyugaensis	1534743	PRJDB3039	271954	Proteobacteria	Gammaproteobacteria	5.54743	44.9	-	BBLE01	81	5169	4904	1/7/15	4/10/17	Scaffold	University of Miyazaki	SAMD00019134	GCA_000818455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/455/GCA_000818455.1_ASM81845v1	25527835	100512A
Thiohalorhabdus denitrificans	381306	PRJEB15735	347691	Proteobacteria	Gammaproteobacteria	2.87664	68.9	-	FMUN01	18	2746	2653	10/17/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05661077	GCA_900101365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/365/GCA_900101365.1_IMG-taxon_2596583511_annotated_assembly	-	HL 19
Acidiplasma cupricumulans JCM 13668	1295373	PRJDB847	243748	Euryarchaeota	Thermoplasmata	1.74753	33.9	-	BBDK01	108	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000438	GCA_001316225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/225/GCA_001316225.1_ASM131622v1	-	JCM 13668
Pseudomonas congelans	200452	PRJNA387592	387592	Proteobacteria	Gammaproteobacteria	5.69843	59.2	-	NQXX01	478	5446	5170	9/20/17	9/22/17	Contig	Max Planck Institute 	SAMN07158965	GCA_002318635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/635/GCA_002318635.1_ASM231863v1	28880925	LP205a
Acidiplasma aeolicum	507754	PRJNA271547	271547	Euryarchaeota	Thermoplasmata	1.74679	34.4	-	LJCQ01	483	1798	1663	10/19/15	4/17/17	Contig	California Institute of Technology	SAMN03274863	GCA_001399695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/695/GCA_001399695.1_ASM139969v1	-	V
Natronolimnobius baerhuensis JCM 12253 = CGMCC 1.3597	1295126	PRJDB831	243737	Euryarchaeota	Halobacteria	3.89306	60.1	-	BBCV01	134	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000517	GCA_001316185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/185/GCA_001316185.1_ASM131618v1	-	JCM 12253
Mycobacterium europaeum	761804	PRJNA299467	299467	Terrabacteria group	Actinobacteria	5.63067	68.5	-	LQOU01	71	5322	5116	4/20/17	4/22/17	Contig	University of Trento	SAMN04216924	GCA_002102155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/155/GCA_002102155.1_ASM210215v1	-	DSM 45397
Methanoculleus chikugoensis JCM 10825	1293042	PRJDB789	243701	Euryarchaeota	Methanomicrobia	2.62754	62.4	-	BBBH01	316	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000410	GCA_001315965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/965/GCA_001315965.1_ASM131596v1	-	JCM 10825
Thermococcus peptonophilus JCM 9653	523851	PRJDB786	243698	Euryarchaeota	Thermococci	1.90945	52.2	-	BBBE01	41	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000482	GCA_001315905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/905/GCA_001315905.1_ASM131590v1	-	JCM 9653
Roseibaca calidilacus	1666912	PRJNA283228	283228	Proteobacteria	Alphaproteobacteria	3.04439	61.9	-	LJSG01	24	2992	2947	10/14/15	6/23/16	Scaffold	Pacific Northwest National Laboratroy	SAMN03785495	GCA_001314645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/645/GCA_001314645.1_ASM131464v1	26497460	-
Streptomyces misionensis JCM 4497	1306177	PRJDB987	245288	Terrabacteria group	Actinobacteria	4.04074	69	-	BBHP01	3352	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017027	GCA_001315385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/385/GCA_001315385.1_ASM131538v1	-	JCM 4497
Phormidesmis priestleyi BC1401	1850361	PRJNA321807	321807	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.5519	49.2	-	LXYR01	213	5385	5005	5/23/16	4/12/17	Scaffold	University of Bristol	SAMN05003984	GCA_001650195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/195/GCA_001650195.1_ASM165019v1	-	BC1401
Thermococcus celer JCM 8558	1293037	PRJDB783	243695	Euryarchaeota	Thermococci	1.89015	57.2	-	BBBB01	46	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000472	GCA_001315845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/845/GCA_001315845.1_ASM131584v1	-	JCM 8558
Rhizobiales bacterium HL-109	1653334	PRJNA283228	283228	Proteobacteria	Alphaproteobacteria	3.79655	64.6	-	LJSX01	47	3501	3449	10/14/15	6/23/16	Contig	Pacific Northwest National Laboratroy	SAMN03785508	GCA_001314785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/785/GCA_001314785.1_ASM131478v1	26497460	-
Idiomarinaceae bacterium HL-53	1298881	PRJNA283228	283228	Proteobacteria	Gammaproteobacteria	2.69015	47.5	-	LIHO01	15	2609	2551	10/14/15	6/23/16	Contig	Pacific Northwest National Laboratroy	SAMN03785502	GCA_001314555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/555/GCA_001314555.1_ASM131455v1	26497460	-
Stenotrophomonas acidaminiphila	128780	PRJNA284377	284377	Proteobacteria	Gammaproteobacteria	3.94252	68.8	-	LDJO01	126	3603	3442	11/4/15	4/11/17	Contig	CSIR-Institute of Microbial Technology	SAMN03701729	GCA_001431595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/595/GCA_001431595.1_ASM143159v1	27014232	JCM 13310
Mycobacterium rutilum JCM 16371	1305864	PRJDB977	245283	Terrabacteria group	Actinobacteria	3.5636	66.3	-	BBHF01	2741	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017019	GCA_001314185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/185/GCA_001314185.1_ASM131418v1	-	JCM 16371
Nocardioides jensenii JCM 1364 = NBRC 14755	1303683	PRJDB940	245961	Terrabacteria group	Actinobacteria	3.67349	67.5	-	BBFY01	2354	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016933	GCA_001313485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/485/GCA_001313485.1_ASM131348v1	-	JCM 1364
Mycobacterium pallens JCM 16370	1305863	PRJDB976	245282	Terrabacteria group	Actinobacteria	5.30799	65.7	-	BBHE01	2675	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017018	GCA_001314165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/165/GCA_001314165.1_ASM131416v1	-	JCM 16370
Xylanimicrobium pachnodae JCM 13526 = NBRC 107786	1305855	PRJDB1331	231388	Terrabacteria group	Actinobacteria	4.00483	71.9	-	BCWJ01	79	-	-	3/4/16	3/4/16	Contig	National Institute of Technology and Evaluation	SAMD00047215	GCA_001592145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/145/GCA_001592145.1_ASM159214v1	-	NBRC 107786
Rhodococcus phenolicus JCM 14914	1303680	PRJDB937	245959	Terrabacteria group	Actinobacteria	4.94196	67.3	-	BBFV01	2757	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016937	GCA_001313425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/425/GCA_001313425.1_ASM131342v1	-	JCM 14914
Lactobacillus silagei JCM 19001	1302250	PRJDB925	243787	Terrabacteria group	Firmicutes	2.6502	44.8	-	BBFL01	47	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016946	GCA_001313225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/225/GCA_001313225.1_ASM131322v1	-	JCM 19001
Lactobacillus kimchicus JCM 15530	1302272	PRJDB924	243786	Terrabacteria group	Firmicutes	2.59525	46.5	-	BBFK01	30	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016940	GCA_001313205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/205/GCA_001313205.1_ASM131320v1	-	JCM 15530
Lactobacillus odoratitofui DSM 19909 = JCM 15043	1423776	PRJDB923	243785	Terrabacteria group	Firmicutes	2.74471	44.2	-	BBFJ01	23	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016938	GCA_001313185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/185/GCA_001313185.1_ASM131318v1	-	JCM 15043
Kosakonia cowanii	208223	PRJNA338173	338173	Proteobacteria	Gammaproteobacteria	5.07798	55.9	chromosome:NZ_CP022690.1/CP022690.1	-	1	4839	4445	8/14/17	8/16/17	Chromosome	Johns Hopkins Bloomberg School of Public Health	SAMN05525567	GCA_002250015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/015/GCA_002250015.1_ASM225001v1	27549662	Esp_Z
Gracilibacillus sp. JCM 18860	1306159	PRJDB983	243807	Terrabacteria group	Firmicutes	4.28618	37.2	-	BBHL01	47	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016820	GCA_001315305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/305/GCA_001315305.1_ASM131530v1	-	JCM 18860
Lactobacillus thailandensis DSM 22698 = JCM 13996	1423810	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.06068	53.5	-	AYZK01	23	1900	1826	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369479	GCA_001436135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/135/GCA_001436135.1_ASM143613v1	26415554	DSM 22698
Methylobacterium phyllosphaerae	418223	PRJEB17329	351502	Proteobacteria	Alphaproteobacteria	6.20375	69.6	-	FOPK01	81	5737	5459	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192567	GCA_900113465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/465/GCA_900113465.1_IMG-taxon_2651870129_annotated_assembly	-	CBMB27
Lactobacillus collinoides	33960	PRJNA274884	274884	Terrabacteria group	Firmicutes	3.70762	45.9	-	JYDC01	127	3384	3217	4/19/16	4/12/17	Contig	Consiglio per la Ricerca e la Sperimentazione in Agricoltura	SAMN03333292	GCA_001623425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/425/GCA_001623425.1_ASM162342v1	27284133	237
Thermodesulfovibrio aggregans JCM 13213	1295128	PRJDB833	243739	Nitrospirae	Nitrospira	1.96693	34.8	-	BBCX01	56	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000519	GCA_001312085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/085/GCA_001312085.1_ASM131208v1	-	JCM 13213
Lactobacillus senioris DSM 24302 = JCM 17472	1423802	PRJDB827	243733	Terrabacteria group	Firmicutes	1.57242	39.3	-	BBCR01	20	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000539	GCA_001312065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/065/GCA_001312065.1_ASM131206v1	-	JCM 17472
Lactobacillus satsumensis DSM 16230 = JCM 12392	1423801	PRJDB826	243732	Terrabacteria group	Firmicutes	2.6357	40.1	-	BBCQ01	122	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000518	GCA_001312045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/045/GCA_001312045.1_ASM131204v1	-	JCM 12392
Lactobacillus saniviri JCM 17471 = DSM 24301	1293598	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.43582	47.7	-	JQCE01	77	2458	2356	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02797787	GCA_001437465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/465/GCA_001437465.1_ASM143746v1	26415554	DSM 24301
Methylomonas koyamae	702114	PRJNA315277	315277	Proteobacteria	Gammaproteobacteria	5.41432	55.8	-	LUUK01	235	4882	4630	5/16/16	4/12/17	Contig	Ghent University	SAMN04555167	GCA_001644025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/025/GCA_001644025.1_ASM164402v1	-	R-45383
Lactobacillus kefiri	33962	PRJNA375758	375758	Terrabacteria group	Firmicutes	2.45229	41.6	-	NCXD01	122	2364	2221	8/29/17	8/30/17	Contig	SysMilk	SAMN06718502	GCA_002276525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/525/GCA_002276525.1_ASM227652v1	-	KR
Lactobacillus amylophilus DSM 20533 = JCM 1125	1423721	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.55697	43.6	-	AYYS01	33	1608	1513	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369500	GCA_001436185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/185/GCA_001436185.1_ASM143618v1	26415554	DSM 20533
Lactobacillus ozensis DSM 23829 = JCM 17196	1423781	PRJDB779	243691	Terrabacteria group	Firmicutes	1.4702	31.9	-	BBAX01	43	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000456	GCA_001311485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/485/GCA_001311485.1_ASM131148v1	-	JCM 17196
Lactobacillus floricola DSM 23037 = JCM 16512	1423744	PRJDB778	243690	Terrabacteria group	Firmicutes	1.36335	34.4	-	BBAW01	27	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000454	GCA_001311465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/465/GCA_001311465.1_ASM131146v1	-	JCM 16512
Lactobacillus rapi DSM 19907 = JCM 15042	1423795	PRJDB777	243689	Terrabacteria group	Firmicutes	2.844	42.9	-	BBAV01	105	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000448	GCA_001311445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/445/GCA_001311445.1_ASM131144v1	-	JCM 15042
Lactobacillus equigenerosi DSM 18793 = JCM 14505	1423742	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.59996	42.7	-	AZGC01	68	1570	1493	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369380	GCA_001435245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/245/GCA_001435245.1_ASM143524v1	26415554	DSM 18793
Lactobacillus nasuensis JCM 17158	1291734	PRJDB768	243680	Terrabacteria group	Firmicutes	2.24888	56.9	-	BBAM01	184	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000455	GCA_001311255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/255/GCA_001311255.1_ASM131125v1	-	JCM 17158
Lactobacillus camelliae DSM 22697 = JCM 13995	1423730	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.56218	55.4	-	AYZJ01	104	2467	2338	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369434	GCA_001436615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/615/GCA_001436615.1_ASM143661v1	26415554	DSM 22697
Lactobacillus pantheris DSM 15945 = JCM 12539 = NBRC 106106	1423783	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.54197	52.9	-	AZFJ01	62	2307	2228	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369409	GCA_001435155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/155/GCA_001435155.1_ASM143515v1	26415554	DSM 15945
Lactobacillus manihotivorans DSM 13343 = JCM 12514	1423769	PRJDB763	243675	Terrabacteria group	Firmicutes	3.20096	47.6	-	BBAH01	307	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000432	GCA_001311155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/155/GCA_001311155.1_ASM131115v1	-	JCM 12514
Marinobacter hydrocarbonoclasticus VT8	351348	PRJNA13239	13239	Proteobacteria	Gammaproteobacteria	4.77976	56.9566	chromosome:NC_008740.1/CP000514.1; plasmid pMAQU01:NC_008738.1/CP000515.1; plasmid pMAQU02:NC_008739.1/CP000516.1	-	3	4462	4288	12/28/06	8/28/17	Complete Genome	DOE Joint Genome Institute	SAMN02598294	GCA_000015365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/365/GCA_000015365.1_ASM1536v1	-	VT8
Klebsiella pneumoniae	573	PRJNA286828	286828	Proteobacteria	Gammaproteobacteria	5.71885	56.9544	chromosome:NZ_CP012426.1/CP012426.1; plasmid pSg1-1:NZ_CP012427.1/CP012427.1; plasmid pSg1-2:NZ_CP012428.1/CP012428.1; plasmid pSg1-3:NZ_CP012429.1/CP012429.1; plasmid pSg1-NDM:NZ_CP011839.1/CP011839.1	-	5	5718	5429	10/27/16	2/21/17	Complete Genome	Tan Tock Seng Hospital	SAMN03770912	GCA_001855315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/315/GCA_001855315.1_ASM185531v1	27494913	KP5
Lactobacillus similis DSM 23365 = JCM 2765	1423804	PRJNA222257	222257	Terrabacteria group	Firmicutes	3.47617	47	-	AYZM01	181	3133	3021	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369474	GCA_001436595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/595/GCA_001436595.1_ASM143659v1	26415554	DSM 23365
Celeribacter marinus	1397108	PRJEB17421	351649	Proteobacteria	Alphaproteobacteria	2.95532	56.3	-	FOSM01	33	2952	2844	10/30/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444421	GCA_900114275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/275/GCA_900114275.1_IMG-taxon_2693429905_annotated_assembly	-	DSM 100036
Lactobacillus sharpeae JCM 1186 = DSM 20505	1291052	PRJDB758	243668	Terrabacteria group	Firmicutes	2.48601	53.3	-	BBAC01	64	2566	2043	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00000421	GCA_001311055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/055/GCA_001311055.1_ASM131105v1	-	JCM 1186
Pseudovibrio denitrificans JCM 12308	1236962	PRJDB661	243655	Proteobacteria	Alphaproteobacteria	6.05374	52.2	-	BAZK01	94	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000429	GCA_001310815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/815/GCA_001310815.1_ASM131081v1	-	JCM 12308
Aliiroseovarius crassostreae	154981	PRJEB17594	351943	Proteobacteria	Alphaproteobacteria	3.6624	58.5	-	FPBS01	90	3661	3424	11/2/16	4/14/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488527	GCA_900116725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/725/GCA_900116725.1_IMG-taxon_2619619030_annotated_assembly	-	DSM 16950
Halolamina pelagica	699431	PRJEB17409	351609	Euryarchaeota	Halobacteria	3.16063	67.1	-	FOXI01	37	3179	3034	10/31/16	3/22/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216277	GCA_900115675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/675/GCA_900115675.1_IMG-taxon_2663762745_annotated_assembly	-	CGMCC 1.10329
Cobetia sp. QF-1	1969833	PRJNA379431	379431	Proteobacteria	Gammaproteobacteria	4.08418	57.5	-	NBVS01	31	3471	3353	6/30/17	7/3/17	Contig	Dalian Maritime University	SAMN06607610	GCA_002213105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/105/GCA_002213105.1_ASM221310v1	-	QF-1
Klebsiella pneumoniae	573	PRJNA376414	376414	Proteobacteria	Gammaproteobacteria	5.89665	56.9512	chromosome:NZ_CP020837.1/CP020837.1; plasmid pBK13043-1:NZ_CP020838.1/CP020838.1; plasmid pBK13043-2:NZ_CP020839.1/CP020839.1; plasmid pBK13043-3:NZ_CP020840.1/CP020840.1	-	4	6004	5699	5/23/17	5/25/17	Complete Genome	Houston Methodist Hospital	SAMN06701573	GCA_002156725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/725/GCA_002156725.1_ASM215672v1	-	BK13043
Thalassobacillus sp. TM-1	1462525	PRJEB5514	244997	Terrabacteria group	Firmicutes	4.06626	42.7	-	CTEA01	5	4000	3894	3/25/15	4/11/17	Contig	URMITE	SAMEA3305382	GCA_001368835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/835/GCA_001368835.1_Thalassobacillus_massiliensis	-	TM-1
Staphylococcus schweitzeri	1654388	PRJEB6397	256294	Terrabacteria group	Firmicutes	2.76107	32.3	-	CCEQ01	38	2763	2595	9/5/14	4/9/17	Contig	WTSI	SAMEA2008032	GCA_000751955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/955/GCA_000751955.1_Sa_FSCB5	-	-
Granulicatella sp. HMSC31F03	1581074	PRJNA269843	269843	Terrabacteria group	Firmicutes	1.91492	37.6	-	LWNJ01	37	1850	1777	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436231	GCA_001807725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/725/GCA_001807725.1_ASM180772v1	-	HMSC31F03
Bathymodiolus azoricus thioautotrophic gill symbiont	235205	PRJEB8264	295655	Proteobacteria	Gammaproteobacteria	1.74103	34.9	-	CVUD02	265	1812	1785	9/14/15	10/27/16	Scaffold	MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY	SAMEA3214536	GCA_001298695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/695/GCA_001298695.2_BazSymBV2	-	BazSymB
Pseudoalteromonas tetraodonis	43659	PRJNA293361	293361	Proteobacteria	Gammaproteobacteria	4.01636	40	-	LITK01	33	3702	3555	9/24/15	4/11/17	Contig	UC Davis	SAMN04001718	GCA_001298405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/405/GCA_001298405.1_ASM129840v1	26543114	UCD-SED8
Neptunomonas antarctica	619304	PRJEB18820	360791	Proteobacteria	Gammaproteobacteria	4.569	45.7	-	FTOE01	25	4206	4098	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421760	GCA_900156635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/635/GCA_900156635.1_IMG-taxon_2681813508_annotated_assembly	-	DSM 22306
Coxiella sp. RIFCSPHIGHO2_12_FULL_44_14	1797697	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.57271	43.6	-	MGPA01	64	1488	1361	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315693	GCA_001795425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/425/GCA_001795425.1_ASM179542v1	27774985	-
Acidovorax caeni	343013	PRJEB17605	351960	Proteobacteria	Betaproteobacteria	4.15233	65.5	-	FPBX01	115	3872	3617	11/2/16	4/14/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04489707	GCA_900116825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/825/GCA_900116825.1_IMG-taxon_2634166357_annotated_assembly	-	R-24608
Klebsiella pneumoniae	573	PRJNA279611	279611	Proteobacteria	Gammaproteobacteria	5.77967	56.9455	chromosome:NZ_CP014762.1/CP014762.1; plasmid pKPN-332:NZ_CP014763.1/CP014763.1; plasmid pKPN-704:NZ_CP014764.1/CP014764.1; plasmid pKpQIL-9b8:NZ_CP014765.1/CP014765.1	-	4	5859	5534	6/15/16	2/21/17	Complete Genome	NHGRI	SAMN03455930	GCA_001663295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/295/GCA_001663295.1_ASM166329v1	-	KPNIH39
Idiomarina zobellii	86103	PRJEB15877	347939	Proteobacteria	Gammaproteobacteria	2.58206	47.1	-	FNCB01	30	2542	2415	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04515658	GCA_900100855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/855/GCA_900100855.1_IMG-taxon_2643221445_annotated_assembly	-	KMM 231
Pseudoalteromonas porphyrae	187330	PRJNA293362	293362	Proteobacteria	Gammaproteobacteria	4.84609	39.7	-	LITL01	101	4322	4072	9/24/15	4/11/17	Contig	UC Davis	SAMN04001720	GCA_001298415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/415/GCA_001298415.1_ASM129841v1	-	UCD-SED9
Pseudomonas libanensis	75588	PRJNA290679	290679	Proteobacteria	Gammaproteobacteria	6.16447	60	-	LHOY01	54	5635	5458	9/22/15	4/11/17	Contig	Monash University Malaysia	SAMN03895991	GCA_001297075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/075/GCA_001297075.1_ASM129707v1	26586879	RIT-PI-g
Idiomarina abyssalis	86102	PRJEB17557	352016	Proteobacteria	Gammaproteobacteria	2.6754	47.1	-	FPBE01	12	2592	2504	11/2/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04515657	GCA_900116625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/625/GCA_900116625.1_IMG-taxon_2642422567_annotated_assembly	-	KMM 227
Klebsiella pneumoniae	573	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	5.83582	56.9384	chromosome:NZ_CP021718.1/CP021718.1; plasmid tig00000000:NZ_CP021713.1/CP021713.1; plasmid tig00000001:NZ_CP021714.1/CP021714.1; plasmid tig00000002:NZ_CP021715.1/CP021715.1; plasmid tig00000003:NZ_CP021716.1/CP021716.1; plasmid tig00000004:NZ_CP021717.1/CP021717.1	-	6	5981	5716	6/8/17	6/10/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014970	GCA_002180295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/295/GCA_002180295.1_ASM218029v1	-	AR_0129
Comamonas kerstersii	225992	PRJNA288932	288932	Proteobacteria	Betaproteobacteria	3.73308	59.5	-	LFYP01	148	3528	3282	9/18/15	4/11/17	Contig	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN03840110	GCA_001294445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/445/GCA_001294445.1_ASM129444v1	-	J29
Klebsiella pneumoniae	573	PRJNA293620	293620	Proteobacteria	Gammaproteobacteria	5.88049	56.9253	chromosome:NZ_CP012561.1/CP012561.1; plasmid pUCLAOXA232-1:NZ_CP012562.1/CP012562.1; plasmid pUCLAOXA232-2:NZ_CP012563.1/CP012563.1; plasmid pUCLAOXA232-3:NZ_CP012564.1/CP012564.1; plasmid pUCLAOXA232-4:NZ_CP012565.1/CP012565.1; plasmid pUCLAOXA232-5:NZ_CP012566.1/CP012566.1; plasmid pUCLAOXA232-6:NZ_CP012567.1/CP012567.1	-	7	6010	5649	9/8/16	2/21/17	Complete Genome	UCLA Medical Center	SAMN04008892	GCA_001741665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/741/665/GCA_001741665.1_ASM174166v1	-	UCLAOXA232KP
Ardenticatena maritima	872965	PRJNA271543	271543	Terrabacteria group	Chloroflexi	3.5597	59.6	-	LGKN01	12	3051	2950	10/2/15	4/11/17	Contig	California Institute of Technology	SAMN03274860	GCA_001306175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/175/GCA_001306175.1_ASM130617v1	26586887	110S
Klebsiella pneumoniae	573	PRJNA329409	329409	Proteobacteria	Gammaproteobacteria	5.67652	56.9228	chromosome:NZ_CP018458.1/CP018458.1; plasmid pKp_Goe_795-1:NZ_CP018460.1/CP018460.1; plasmid pKp_Goe_795-2:NZ_CP018461.1/CP018461.1; plasmid pKp_Goe_795-3:NZ_CP018462.1/CP018462.1; plasmid pKp_Goe_795-4:NZ_CP018459.1/CP018459.1	-	5	5699	5383	12/13/16	2/21/17	Complete Genome	University Medical Center Goettingen	SAMN05412810	GCA_001902395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/395/GCA_001902395.1_ASM190239v1	-	Kp_Goe_39795
Marinagarivorans algicola	1513270	PRJNA289034	289034	Proteobacteria	Gammaproteobacteria	4.02083	45.1	-	LFYV01	79	3316	3180	9/22/15	4/11/17	Contig	Shandong University at Weihai	SAMN03840795	GCA_001296225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/225/GCA_001296225.1_ASM129622v1	-	JL1
Helicobacter ailurogastricus	1578720	PRJEB7933	293179	Proteobacteria	delta/epsilon subdivisions	1.58053	47.6	-	CDMH01	68	1618	1470	8/17/15	4/11/17	Scaffold	UGENT	SAMEA3172286	GCA_001282985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/985/GCA_001282985.1_gastric_feline_helicobacters	-	-
Candidatus Thioglobus singularis	1427364	PRJNA252014	252014	Proteobacteria	Gammaproteobacteria	1.71415	38.7	chromosome:NZ_CP008725.1/CP008725.1	-	1	1672	1469	7/8/16	4/13/17	Chromosome	University of Washington	SAMN02848474	GCA_001682155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/155/GCA_001682155.1_ASM168215v1	-	-
Caballeronia cordobensis	1353886	PRJNA288427	288427	Proteobacteria	Betaproteobacteria	9.0445	63.4	-	LGRC01	69	8436	8060	9/3/15	4/11/17	Scaffold	Universidad Nacional de La Plata	SAMN03854505	GCA_001278535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/535/GCA_001278535.1_ASM127853v1	26494680	LMG 27620
Pantoea septica	472695	PRJEB4277	218495	Proteobacteria	Gammaproteobacteria	4.54808	59.1	-	CCAQ01	37	4279	4121	3/18/14	4/17/17	Contig	URMITE	SAMEA3138967	GCA_000612605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/605/GCA_000612605.1_FF5	26568786	-
Mangrovimonas sp. TPBH4	1645914	PRJNA281691	281691	FCB group	Bacteroidetes/Chlorobi group	4.14924	38.7	-	LBIO01	80	3567	3489	9/9/15	4/11/17	Contig	UNIVERSITI SAINS MALAYSIA	SAMN03494313	GCA_001280505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/505/GCA_001280505.1_ASM128050v1	-	TPBH4
Microbacterium chocolatum	84292	PRJNA280877	280877	Terrabacteria group	Actinobacteria	3.05651	70	-	LAVO01	26	2945	2806	9/2/15	4/11/17	Scaffold	SIT	SAMN03476113	GCA_001278365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/365/GCA_001278365.1_ASM127836v1	-	SIT 101
Flavobacterium akiainvivens	1202724	PRJEB17177	351351	FCB group	Bacteroidetes/Chlorobi group	4.49502	43.8	-	FOYA01	44	4046	3959	10/31/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444144	GCA_900115875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/875/GCA_900115875.1_IMG-taxon_2693429907_annotated_assembly	-	DSM 25510
Achromatium sp. WMS3	1604836	PRJNA273490	273490	Proteobacteria	Gammaproteobacteria	3.8456	38.1	-	JXSO01	1113	3821	3116	8/31/15	9/1/15	Contig	Pennsylvania State University	SAMN03292485	GCA_001276615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/615/GCA_001276615.1_ASM127661v1	26322031	-
Persicobacter sp. CCB-QB2	1561025	PRJNA263536	263536	FCB group	Bacteroidetes/Chlorobi group	3.87463	42.5	-	LBGV01	2	3464	3200	8/26/15	4/11/17	Contig	Universiti Sains Malaysia	SAMN03103716	GCA_001274635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/274/635/GCA_001274635.1_ASM127463v1	-	CCB-QB2
Streptomyces antibioticus	1890	PRJNA299224	299224	Terrabacteria group	Actinobacteria	10.1459	70.7	-	LMWQ01	29	9242	8870	1/13/16	3/12/17	Scaffold	Bielefeld University	SAMN04193346	GCA_001514065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/065/GCA_001514065.1_ASM151406v1	-	DSM 40234
Pseudomonas thivervalensis	86265	PRJNA290438	290438	Proteobacteria	Gammaproteobacteria	6.582	61.2	-	LHVE01	25	5886	5713	8/18/15	4/11/17	Contig	JLU	SAMN03891671	GCA_001269655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/655/GCA_001269655.1_ASM126965v1	-	DSM 13194
Erwinia iniecta	1560201	PRJNA263304	263304	Proteobacteria	Gammaproteobacteria	4.77313	52.8	-	JRXF01	121	4408	4054	8/14/15	4/10/17	Scaffold	Colorado State University	SAMN03098359	GCA_001267545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/545/GCA_001267545.1_ASM126754v1	26198254	B149
Klebsiella pneumoniae	573	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	5.99573	56.9145	chromosome:NZ_CP021833.1/CP021833.1; plasmid tig00000500_pilon:NZ_CP021834.1/CP021834.1; plasmid tig00000516_pilon:NZ_CP021835.1/CP021835.1; plasmid tig00000583_pilon:NZ_CP021836.1/CP021836.1; plasmid tig00000601_pilon:NZ_CP021837.1/CP021837.1	-	5	6141	5867	6/16/17	6/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014961	GCA_002197225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/225/GCA_002197225.1_ASM219722v1	-	AR_0120
Actinomyces meyeri	52773	PRJEB16398	349298	Terrabacteria group	Actinobacteria	2.02641	65.6	-	FNLK01	15	1792	1661	10/21/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04489715	GCA_900105015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/015/GCA_900105015.1_IMG-taxon_2634166153_annotated_assembly	-	DSM 20733
Clostridium homopropionicum	36844	PRJEB17289	351459	Terrabacteria group	Firmicutes	3.64483	31.1	-	FOOL01	41	3571	3400	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488501	GCA_900113195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/195/GCA_900113195.1_IMG-taxon_2622736521_annotated_assembly	-	DSM 5847
Klebsiella pneumoniae	573	PRJNA391323	391323	Proteobacteria	Gammaproteobacteria	5.81658	56.9091	chromosome:NZ_CP022127.1/CP022127.1; plasmid p1605752AC2:NZ_CP022126.1/CP022126.1; plasmid p1605752FIB:NZ_CP022125.1/CP022125.1; plasmid p1605752FIB_2:NZ_CP022128.1/CP022128.1	-	4	5849	5534	6/30/17	9/15/17	Complete Genome	Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion	SAMN07265011	GCA_002211905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/905/GCA_002211905.1_ASM221190v1	-	DHQP1605752_NV
Dysgonomonas sp. BGC7	1658008	PRJEB9420	290453	FCB group	Bacteroidetes/Chlorobi group	4.32235	37.1	-	CVRP01	38	3526	3419	7/22/15	6/12/17	Contig	UCONNMISEQ	SAMEA3432782	GCA_001261735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/735/GCA_001261735.1_BGC7_v2	-	BGC7
Nautella italica	481446	PRJEB9393	290267	Proteobacteria	Alphaproteobacteria	4.05519	59.9	-	CVRL01	46	3844	3741	7/17/15	4/10/17	Contig	UVEG	SAMEA3393042	GCA_001251095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/095/GCA_001251095.1_N.italicaCECT7321_Prokka	-	CECT 7321
Roseovarius tolerans	74031	PRJNA239824	239824	Proteobacteria	Alphaproteobacteria	3.74912	63.6	-	LGVV01	121	3744	3578	8/5/15	4/10/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03943304	GCA_001247715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/715/GCA_001247715.1_ASM124771v1	26404611	EL-164
Candidatus Stoquefichus sp. KLE1796	1574263	PRJNA268323	268323	Terrabacteria group	Firmicutes	3.15142	30.3	-	LTZJ01	114	3192	3045	3/3/16	4/12/17	Scaffold	The Genome Institute at Washington University	SAMN03956393	GCA_001580115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/115/GCA_001580115.1_ASM158011v1	-	KLE1796
Pseudorhodobacter antarcticus	1077947	PRJEB16911	351044	Proteobacteria	Alphaproteobacteria	3.7968	59.2	-	FOCO01	115	3798	3529	10/29/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216227	GCA_900110135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/135/GCA_900110135.1_IMG-taxon_2667527436_annotated_assembly	-	CGMCC 1.10836
Vibrio lentus	136468	PRJNA318805	318805	Proteobacteria	Gammaproteobacteria	5.17369	43.9	-	MAKA01	353	4726	4437	7/21/16	4/13/17	Scaffold	Massachusetts Institute of Technology	SAMN04867935	GCA_001691195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/195/GCA_001691195.1_ASM169119v1	-	5F79
Lactobacillus agilis	1601	PRJEB9399	284480	Terrabacteria group	Firmicutes	2.13478	41.7	-	CVQY01	16	2122	1960	5/21/15	4/10/17	Scaffold	URMITE	SAMEA3393060	GCA_001243975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/975/GCA_001243975.1_Lactobacillus_agilis	-	Marseille
Jeotgalibaca dankookensis	708126	PRJDB4066	290873	Terrabacteria group	Firmicutes	2.07751	37.1	-	BBYN01	55	2037	1961	7/23/15	4/10/17	Contig	Korea Polar Research Institute	SAMD00035448	GCA_001192875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/875/GCA_001192875.1_ASM119287v1	-	KCCM 90229
Herbaspirillum chlorophenolicum NBRC 102525	1349766	PRJDB1350	231407	Proteobacteria	Betaproteobacteria	5.29664	61.2	-	BCTG01	107	4764	4609	2/18/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046732	GCA_001571165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/165/GCA_001571165.1_ASM157116v1	-	NBRC 102525
Virgibacillus pantothenticus	1473	PRJEB19295	369767	Terrabacteria group	Firmicutes	4.90428	37.4	-	FUFM01	19	4470	4216	2/6/17	4/17/17	Scaffold	URMITE	SAMEA78451168	GCA_900162095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/095/GCA_900162095.1_PRJEB19295	-	Marseille-P1102
Octadecabacter temperatus	1458307	PRJEB18352	355810	Proteobacteria	Alphaproteobacteria	3.26388	54.7	-	FSRP01	4	3294	3218	12/14/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444287	GCA_900142425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/425/GCA_900142425.1_IMG-taxon_2698536702_annotated_assembly	-	DSM 26878
Arsenicicoccus sp. UBA2120	1946055	PRJNA348753	348753	Terrabacteria group	Actinobacteria	3.88119	71.8	-	DCYC01	110	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450345	GCA_002330965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/965/GCA_002330965.1_ASM233096v1	28894102	-
Corynebacterium cystitidis	35757	PRJEB6403	251923	Terrabacteria group	Actinobacteria	3.01157	56.9	chromosome 1:NZ_LT906473.1/LT906473.1	-	1	2820	2654	8/15/17	8/28/17	Complete Genome	SC	SAMEA4530656	GCA_900187295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/295/GCA_900187295.1_52191_E01	-	NCTC11863
Bradyrhizobium pachyrhizi	280333	PRJNA287433	287433	Proteobacteria	Alphaproteobacteria	8.71197	63.8	-	LFIQ01	124	8096	7479	7/30/15	4/10/17	Scaffold	Embrapa Soja	SAMN03782120	GCA_001189245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/245/GCA_001189245.1_ASM118924v1	"1,956,758,426,383,650"	PAC 48
Trabulsiella odontotermitis	379893	PRJNA251521	251521	Proteobacteria	Gammaproteobacteria	4.78443	54.6	-	JNGH01	126	4807	3728	7/29/15	4/3/17	Contig	University of Copenhagen	SAMN02836821	GCA_001188485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/485/GCA_001188485.1_ASM118848v1	26162887	1
uncultured Acidilobus sp. CIS	1410574	PRJNA221622	221622	TACK group	Crenarchaeota	1.42669	59.2	-	AYMB01	18	1721	1671	11/5/13	11/5/13	Contig	Montana State University	SAMN02364258	GCA_000495695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/695/GCA_000495695.1_Acidilobus_sp._CIS	-	-
Paracoccus sanguinis	1545044	PRJNA254739	254739	Proteobacteria	Alphaproteobacteria	3.42319	70.5	-	JRKT01	176	3277	3080	10/6/14	4/9/17	Contig	Wadsworth Center / NYSDOH	SAMN02927204	GCA_000763785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/785/GCA_000763785.1_ASM76378v1	-	4681
Pseudomonas trivialis	200450	PRJEB16396	349300	Proteobacteria	Gammaproteobacteria	5.63467	60.9	chromosome I:NZ_LT629760.1/LT629760.1	-	1	5124	4878	10/21/16	4/13/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04490205	GCA_900104885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/885/GCA_900104885.1_IMG-taxon_2639762577_annotated_assembly	-	BS3111
uncultured Thiohalocapsa sp. PB-PSB1	1385625	PRJNA215075	215075	Proteobacteria	Gammaproteobacteria	6.74758	58.7	-	AVFR01	1386	6260	6202	11/5/13	11/5/13	Contig	UC Davis	SAMN02303577	GCA_000495615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/615/GCA_000495615.1_berryPSB1	-	-
Lysinibacillus xylanilyticus	582475	PRJNA288619	288619	Terrabacteria group	Firmicutes	5.22164	36.7	-	LFXJ01	13	5005	4729	7/21/15	4/10/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN03835249	GCA_001183605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/605/GCA_001183605.1_ASM118360v1	26358604	DSM 23493
Yersinia pekkanenii	1288385	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	5.09098	47.4	-	CWJL01	250	4953	4520	7/8/15	4/10/17	Scaffold	SC	SAMEA1486427	GCA_001244635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/635/GCA_001244635.1_8016_2_92	-	type strain: CIP110230
Actinobaculum suis	1657	PRJNA287444	287444	Terrabacteria group	Actinobacteria	2.32545	57.8	-	MASY01	56	1906	1785	7/14/16	4/13/17	Contig	School of Veterinary Medicine and Animal Science / University of Sao Paulo	SAMN03783262	GCA_001685155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/155/GCA_001685155.1_ASM168515v1	-	C1-9-1
Nonomuraea sp. NBRC 110462	1691891	PRJDB4095	298987	Terrabacteria group	Actinobacteria	8.99213	72.5	-	BBZG01	8	8225	7959	10/15/15	4/11/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00035863	GCA_001417755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/755/GCA_001417755.1_ASM141775v1	26659677	NBRC 110462
bacteria symbiont BFo2 of Frankliniella occidentalis	1628856	PRJNA234511	234511	unclassified Bacteria	unclassified Bacteria (miscellaneous)	2.69546	47.9	-	LAGR01	201	2677	2514	3/30/16	3/30/16	Scaffold	Swansea University	SAMN03389134	GCA_001602535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/535/GCA_001602535.1_ASM160253v1	-	Keele1
bacteria symbiont BFo1 of Frankliniella occidentalis	1628855	PRJNA234511	234511	unclassified Bacteria	unclassified Bacteria (miscellaneous)	5.01605	56.5	-	LAGQ01	191	4661	4350	3/30/16	3/30/16	Contig	Swansea University	SAMN03389133	GCA_001602555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/555/GCA_001602555.1_ASM160255v1	-	Keele2
Edwardsiella hoshinae	93378	PRJNA325544	325544	Proteobacteria	Gammaproteobacteria	3.81165	56.9	chromosome:NZ_CP016043.1/CP016043.1	-	1	3475	3245	10/12/16	4/13/17	Complete Genome	Mississippi State University	SAMN05240577	GCA_001761405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/405/GCA_001761405.1_ASM176140v1	-	ATCC 35051
Mycobacterium heckeshornense	110505	PRJNA352780	352780	Terrabacteria group	Actinobacteria	4.70575	66	-	MPJF01	217	4588	4262	11/17/16	4/16/17	Contig	Central Tuberculosis Research Institute	SAMN05990901	GCA_001881585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/585/GCA_001881585.1_ASM188158v1	-	CTRI-134
Lactobacillus koreensis JCM 16448	1423819	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.95711	49.2	-	AZDP01	123	2662	2569	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369459	GCA_001435525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/525/GCA_001435525.1_ASM143552v1	26415554	JCM 16448
Mycobacterium conceptionense	451644	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.45264	66.5	-	LZSK01	110	6210	6027	6/17/16	4/5/17	Contig	JCVI	SAMN04634256	GCA_001665335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/335/GCA_001665335.1_ASM166533v1	-	ACS2738
Leptolinea tardivitalis	229920	PRJNA289671	289671	Terrabacteria group	Chloroflexi	3.67658	46.8	-	LGCK01	15	3357	3276	10/2/15	4/11/17	Contig	California Institute of Technology	SAMN03856817	GCA_001306095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/095/GCA_001306095.1_ASM130609v1	26586893	YMTK-2
Levilinea saccharolytica	229921	PRJDB4022	288361	Terrabacteria group	Chloroflexi	4.0846	59.7	-	BBXZ01	196	3642	3428	7/4/15	4/10/17	Contig	National Institute of Advanced Industrial Science and Technology (AIST)	SAMD00034888	GCA_001050255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/255/GCA_001050255.1_ASM105025v1	26383658	KIBI-1
Bellilinea caldifistulae	360411	PRJDB4020	288359	Terrabacteria group	Chloroflexi	3.65352	52.8	-	BBXX01	43	3429	3328	7/4/15	4/10/17	Contig	National Institute of Advanced Industrial Science and Technology (AIST)	SAMD00034886	GCA_001050215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/215/GCA_001050215.1_ASM105021v1	26383658	GOMI-1
Mycobacterium nonchromogenicum	1782	PRJEB9496	285978	Terrabacteria group	Actinobacteria	6.35321	66.3	-	CVTC01	1934	6122	6061	6/8/15	6/8/15	Scaffold	Centre for Proteomic and Genomic Research	SAMEA3444531	GCA_001050055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/055/GCA_001050055.1_Mycobacterium_nonchromogenicum_strain_NCK_8460	-	NCK 8460
Nereida ignava	282199	PRJEB8965	284894	Proteobacteria	Alphaproteobacteria	2.88835	54	-	CVQV01	69	2892	2757	5/25/15	4/11/17	Contig	UVEG	SAMEA3312982	GCA_001404155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/155/GCA_001404155.1_N.ignavaCECT5292_PROKKA	-	CECT 5292
Altererythrobacter ishigakiensis	476157	PRJNA319016	319016	Proteobacteria	Alphaproteobacteria	2.67398	56.9	chromosome:NZ_CP015963.1/CP015963.1	-	1	2593	2533	6/15/16	4/17/17	Complete Genome	"Second Institute of Oceanography, State Oceanic Administration"	SAMN04870883	GCA_001663155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/155/GCA_001663155.1_ASM166315v1	-	NBRC 107699
Marinobacter sp. CP1	1671721	PRJNA244670	244670	Proteobacteria	Gammaproteobacteria	4.76842	56.9	chromosome:NZ_CP011929.1/CP011929.1	-	1	4423	4232	8/12/15	4/10/17	Complete Genome	US Naval Research laboratory	SAMN03776897	GCA_001266795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/795/GCA_001266795.1_ASM126679v1	26404584	CP1
Vibrio diabolicus	50719	PRJNA382237	382237	Proteobacteria	Gammaproteobacteria	5.237	44.8	-	NCTH01	60	4843	4593	4/24/17	5/5/17	Contig	Universidad de Los Lagos	SAMN06702681	GCA_002105475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/475/GCA_002105475.1_ASM210547v1	-	Art-Gut C1
Fructobacillus pseudoficulneus	220714	PRJDB3977	288288	Terrabacteria group	Firmicutes	1.41186	44.5	-	BBXS01	41	1376	1294	6/25/15	4/10/17	Contig	"Faculty of Bioindustry, Tokyo University of Agriculture"	SAMD00031993	GCA_001047115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/115/GCA_001047115.1_ASM104711v1	26715526	DSM 15468
Yersinia aleksiciae	263819	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.52604	48.8	-	CGBL01	53	4223	4026	3/15/15	4/11/17	Scaffold	SC	SAMEA859928	GCA_001319845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/845/GCA_001319845.1_4821_6_8	-	404/81
Dysgonomonas macrotermitis	1346286	PRJDB3926	287122	FCB group	Bacteroidetes/Chlorobi group	4.65576	38.5	-	BBXL01	78	3930	3817	6/13/15	7/3/17	Contig	Shandong University	SAMD00031688	GCA_001047035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/035/GCA_001047035.1_ASM104703v1	26316633	JCM 19375
Methylobacterium aquaticum	270351	PRJNA278000	278000	Proteobacteria	Alphaproteobacteria	7.42533	69.9	-	LABX01	512	6733	6200	6/30/15	4/10/17	Contig	CSIR-Institute of Microbial Technology	SAMN03401149	GCA_001043915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/915/GCA_001043915.1_ASM104391v1	-	DSM 16371
Methylobacterium platani	427683	PRJNA317936	317936	Proteobacteria	Alphaproteobacteria	7.02389	71.2	-	LWHQ01	150	6493	6177	5/31/16	4/13/17	Scaffold	Korea Institute of Bioscience and Biotechnology	SAMN04631760	GCA_001653715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/715/GCA_001653715.1_ASM165371v1	-	PMB02
Pseudomonas taetrolens	47884	PRJEB16400	349412	Proteobacteria	Gammaproteobacteria	4.93619	58.2	-	FNRS01	2	4523	4358	10/22/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04490203	GCA_900104825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/825/GCA_900104825.1_IMG-taxon_2639762632_annotated_assembly	-	BS3652
Pseudomonas lini	163011	PRJNA274345	274345	Proteobacteria	Gammaproteobacteria	6.4955	58.8	-	JYLB01	26	5947	5753	6/30/15	6/26/17	Contig	"Zentralinstitut fuer Ernaehrungs- und Lebensmittelforschung (ZIEL), WZW, TUM"	SAMN03328801	GCA_001042905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/905/GCA_001042905.1_G8692	26675012	DSM 16768
Pseudomonas deceptionensis	882211	PRJEB16503	349428	Proteobacteria	Gammaproteobacteria	5.09676	58.5	-	FNUD01	2	4718	4555	10/22/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04489800	GCA_900106095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/095/GCA_900106095.1_IMG-taxon_2636416038_annotated_assembly	-	LMG 25555
Vogesella sp. EB	1526735	PRJNA286802	286802	Proteobacteria	Betaproteobacteria	3.54016	64.4	-	LFDT01	75	3378	3231	6/22/15	4/10/17	Contig	INDEAR	SAMN03770809	GCA_001037925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/925/GCA_001037925.1_VogEB1.0	-	EB
Bacillus marisflavi	189381	PRJNA277408	277408	Terrabacteria group	Firmicutes	4.34579	48.7	-	LDWH01	37	4465	4291	6/24/15	4/10/17	Contig	University of Malaya	SAMN03744443	GCA_001038695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/695/GCA_001038695.1_ASM103869v1	-	LK16
Dickeya solani	1089444	PRJNA260885	260885	Proteobacteria	Gammaproteobacteria	5.05287	56.9	chromosome:NZ_CP009460.1/CP009460.1	-	1	4493	4300	9/26/14	6/12/17	Complete Genome	University of Malaya	SAMN03067133	GCA_000758345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/345/GCA_000758345.1_ASM75834v1	-	ND14b
Lactobacillus acetotolerans DSM 20749 = JCM 3825	1423714	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.58508	36.3	-	AYZC01	123	1528	1435	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369436	GCA_001436775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/775/GCA_001436775.1_ASM143677v1	26415554	DSM 20749
Mycobacterium sinense	875328	PRJNA305922	305922	Terrabacteria group	Actinobacteria	4.57141	68.4	-	LZIN01	110	4385	4153	6/17/16	4/12/17	Contig	JCVI	SAMN04692035	GCA_001667375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/375/GCA_001667375.1_ASM166737v1	-	852014-51077_SCH5608930-a
Altererythrobacter marensis	543877	PRJNA300612	300612	Proteobacteria	Alphaproteobacteria	2.90205	64.7	-	LMVG01	14	2758	2680	12/8/15	4/11/17	Contig	"Second Institute of Oceanography, State Oceanic Administration"	SAMN04226661	GCA_001461885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/461/885/GCA_001461885.1_ASM146188v1	26847882	DSM 21428
Lactobacillus panis DSM 6035	1423782	PRJNA284098	284098	Terrabacteria group	Firmicutes	2.08279	47.9	-	LDPB01	219	2072	1794	6/15/15	4/10/17	Contig	"The First Affiliated Hospital, College of Medicine, Zhejiang University"	SAMN03658566	GCA_001027985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/985/GCA_001027985.1_ASM102798v1	26205855	DSM 6035
Aeromonas aquatica	558964	PRJNA260478	260478	Proteobacteria	Gammaproteobacteria	4.5823	61.2	-	JRGL01	171	4216	4009	10/8/14	4/9/17	Contig	Auburn University	SAMN03023875	GCA_000764655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/655/GCA_000764655.1_ASM76465v1	"2,541,450,025,852,020"	AE235
Bacillus circulans	1397	PRJNA285407	285407	Terrabacteria group	Firmicutes	5.45427	35.4	-	LDPH01	103	5294	5088	6/19/15	4/10/17	Contig	Rochester Institute of Technology	SAMN03753509	GCA_001029855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/855/GCA_001029855.1_RIT379_V1	26227604	RIT379
Tenacibaculum mesophilum	104268	PRJNA284870	284870	FCB group	Bacteroidetes/Chlorobi group	3.41982	31.5	-	LDOD01	63	3172	3066	6/15/15	4/10/17	Scaffold	Xiamen University	SAMN03733602	GCA_001027945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/945/GCA_001027945.1_ASM102794v1	-	HMG1
Mycobacterium heraklionense	512402	PRJNA305922	305922	Terrabacteria group	Actinobacteria	4.57494	67.7	-	LZKB01	208	4289	4039	6/17/16	4/13/17	Contig	JCVI	SAMN04634253	GCA_001672655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/655/GCA_001672655.1_ASM167265v1	-	E2548
Marinitoga sp. 1197	1428449	PRJNA229503	229503	Thermotogae	Thermotogae	2.27456	27.4	-	AZAY01	51	2186	2087	6/7/15	4/18/17	Contig	University of Alberta	SAMN03764408	GCA_001021165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/165/GCA_001021165.1_ASM102116v1	-	1197
Moellerella wisconsensis	158849	PRJNA254477	254477	Proteobacteria	Gammaproteobacteria	3.5229	40	-	LDOF01	97	3157	3003	6/5/15	4/10/17	Contig	Canadian Food Inspection Agency	SAMN03389448	GCA_001020485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/485/GCA_001020485.1_ASM102048v1	-	GTA-1455
Cellulosimicrobium funkei NBRC 104118	1349761	PRJDB1345	231401	Terrabacteria group	Actinobacteria	4.37048	74.5	-	BCSK01	116	3963	3806	2/10/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046475	GCA_001570825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/825/GCA_001570825.1_ASM157082v1	-	NBRC 104118
Delftia lacustris	558537	PRJEB16626	349953	Proteobacteria	Betaproteobacteria	7.17498	66.2	-	FNPE01	74	6492	6283	10/22/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421547	GCA_900107225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/225/GCA_900107225.1_IMG-taxon_2675903026_annotated_assembly	-	LMG 24775
Pusillimonas sp. T7-7	1007105	PRJNA65659	65659	Proteobacteria	Betaproteobacteria	3.92481	56.8906	chromosome:NC_015458.1/CP002663.1; plasmid unnamed:NC_015459.1/CP002664.1	-	2	3700	3596	4/26/11	4/17/17	Complete Genome	"TEDA School of Biological Sciences and Biotechnology, Nankai University"	SAMN02603906	GCA_000209655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/209/655/GCA_000209655.1_ASM20965v1	21622753	T7-7
Klebsiella pneumoniae	573	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	5.98926	56.8854	chromosome:NZ_CP021708.1/CP021708.1; plasmid tig00000001_p1:NZ_CP021709.1/CP021709.1; plasmid tig00000853:NZ_CP021710.1/CP021710.1; plasmid tig00000856:NZ_CP021711.1/CP021711.1; plasmid tig00000857:NZ_CP021712.1/CP021712.1	-	5	6081	5754	6/8/17	6/10/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014984	GCA_002180315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/315/GCA_002180315.1_ASM218031v1	-	AR_0143
Plautia stali symbiont	891974	PRJDA53367	53367	Proteobacteria	Gammaproteobacteria	4.09285	56.8841	chromosome:NC_022546.1/AP012551.1; plasmid pPstS1:NC_022533.1/AP012552.1; plasmid pPstS2:NC_022534.1/AP012553.1	-	3	4201	2770	10/4/13	4/10/17	Complete Genome	"School of Pharmacy, Nihon University"	SAMD00013603	GCA_000180175.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/180/175/GCA_000180175.2_ASM18017v2	21470838	-
Methyloversatilis discipulorum	1119528	PRJNA171852	171852	Proteobacteria	Betaproteobacteria	4.30481	66.6	-	ARFL01	1	3982	3900	4/19/13	6/20/17	Scaffold	DOE Joint Genome Institute	SAMN02441027	GCA_000374245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/245/GCA_000374245.1_ASM37424v1	-	RZ94
Erythrobacter marinus	874156	PRJNA280888	280888	Proteobacteria	Alphaproteobacteria	2.8341	59.1	-	LBHU01	10	2717	2651	5/26/15	4/18/17	Contig	The Third Institute of State Oceanic Administration	SAMN03481547	GCA_001013305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/013/305/GCA_001013305.1_ASM101330v1	26220886	HWDM-33
Mycobacterium senegalense	1796	PRJNA285366	285366	Terrabacteria group	Actinobacteria	6.855	66.4	-	LDPU01	14	6693	6478	6/8/15	4/10/17	Scaffold	UCSF	SAMN03744420	GCA_001021425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/425/GCA_001021425.1_ASM102142v1	-	CK2
Vibrio antiquarius	150340	PRJNA15693	15693	Proteobacteria	Gammaproteobacteria	4.85596	44.9	-	AAKK02	105	4576	4244	9/13/05	5/19/17	Scaffold	TIGR	SAMN02435854	GCA_000152485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/485/GCA_000152485.1_ASM15248v1	-	EX25
Brevibacillus formosus	54913	PRJNA284243	284243	Terrabacteria group	Firmicutes	6.21536	47.4	-	LDCN01	26	5867	5540	5/22/15	4/17/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN03700042	GCA_001012775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/775/GCA_001012775.1_ASM101277v1	26205874	DSM 9885
Klebsiella pneumoniae 342	507522	PRJNA28471	28471	Proteobacteria	Gammaproteobacteria	5.92026	56.884	chromosome:NC_011283.1/CP000964.1; plasmid pKP187:NC_011282.1/CP000965.1; plasmid pKP91:NC_011281.1/CP000966.1	-	3	5937	5626	9/24/08	2/21/17	Complete Genome	J. Craig Venter Institute	SAMN02603449	GCA_000019565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/565/GCA_000019565.1_ASM1956v1	18654632	342
Erythrobacter gangjinensis	502682	PRJNA280889	280889	Proteobacteria	Alphaproteobacteria	2.72496	62.7	-	LBHC01	8	2674	2594	5/20/15	4/10/17	Contig	The Third Institute of State Oceanic Administration	SAMN03480138	GCA_001010925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/925/GCA_001010925.1_ASM101092v1	26220886	K7-2
Streptomyces stelliscabiei	146820	PRJNA282837	282837	Terrabacteria group	Actinobacteria	9.97834	71	-	LBNW01	909	9115	8043	5/15/15	3/12/17	Scaffold	USDA/ARS/NCAUR	SAMN03580356	GCA_001008135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/135/GCA_001008135.1_ASM100813v1	-	NRRL B-24447
Spongiibacter sp. UBA1325	1947543	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.58576	55.5	-	DBTD01	11	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06453717	GCA_002306875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/875/GCA_002306875.1_ASM230687v1	28894102	-
Luteibacter rhizovicinus	242606	PRJNA289437	289437	Proteobacteria	Gammaproteobacteria	4.97891	64	-	LGRQ01	1235	4861	4154	4/29/16	4/12/17	Contig	Institute of Microbiology of the ASCR	SAMN03853746	GCA_001636625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/625/GCA_001636625.1_ASM163662v1	-	L214
Nitrosomonas communis	44574	PRJEB16556	349836	Proteobacteria	Betaproteobacteria	3.66096	44.4	-	FNNH01	148	3326	2999	10/22/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421882	GCA_900106545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/545/GCA_900106545.1_IMG-taxon_2675903044_annotated_assembly	-	Nm110
Staphylococcus succinus subsp. succinus	224030	PRJNA283021	283021	Terrabacteria group	Firmicutes	2.88769	32.9	-	LCSH01	162	2727	2644	5/14/15	4/10/17	Contig	Jiamusi University	SAMN03603322	GCA_001006765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/765/GCA_001006765.1_ASM100676v1	-	DSM 14617
Salinicoccus halodurans	407035	PRJEB17447	351624	Terrabacteria group	Firmicutes	2.73541	44.5	-	FOTB01	10	2803	2691	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216235	GCA_900114445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/445/GCA_900114445.1_IMG-taxon_2687453789_annotated_assembly	-	CGMCC 1.6501
Mycobacterium elephantis	81858	PRJNA354248	354248	Terrabacteria group	Actinobacteria	5.31355	67.6	-	MVHP01	83	5088	4953	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064238	GCA_002086605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/605/GCA_002086605.1_ASM208660v1	-	FI-09383
Klebsiella pneumoniae	573	PRJNA355274	355274	Proteobacteria	Gammaproteobacteria	5.81154	56.8775	chromosome:NZ_CP018437.1/CP018437.1; plasmid pMNCRE53_1:NZ_CP018433.1/CP018433.1; plasmid pMNCRE53_2:NZ_CP018435.1/CP018435.1; plasmid pMNCRE53_3:NZ_CP018436.1/CP018436.1; plasmid pMNCRE53_4:NZ_CP018434.1/CP018434.1	-	5	5911	5644	12/13/16	2/22/17	Complete Genome	University of Minnesota	SAMN06067844	GCA_001902235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/235/GCA_001902235.1_ASM190223v1	-	MNCRE53
Halomonas huangheensis	1178482	PRJNA214306	214306	Proteobacteria	Gammaproteobacteria	4.7588	58.5	-	AVBC01	68	4203	4071	9/23/13	4/9/17	Contig	Chinese Academy of Agricultural Sciences	SAMN02469496	GCA_000470745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/745/GCA_000470745.1_version_1_of_the_Halomonas_huanghegensis	-	BJGMM-B45
candidate division TM6 bacterium GW2011_GWF2_28_16	1619077	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.06232	27.6	-	LBNX01	6	953	953	5/7/15	5/7/15	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03319238	GCA_000989185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/989/185/GCA_000989185.1_ASM98918v1	-	-
Streptomyces europaeiscabiei	146819	PRJNA282974	282974	Terrabacteria group	Actinobacteria	9.98207	70.5	-	LCTL01	1056	8972	7884	5/6/15	3/11/17	Contig	USDA/ARS/NCAUR	SAMN03581172	GCA_000988945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/945/GCA_000988945.1_ASM98894v1	-	NRRL B-24443
Sulfitobacter geojensis	1342299	PRJNA321723	321723	Proteobacteria	Alphaproteobacteria	4.26644	57.9	-	LXYM01	46	4095	3990	5/24/16	4/12/17	Scaffold	University of Alberta	SAMN04957305	GCA_001650795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/795/GCA_001650795.1_ASM165079v1	-	EhN01
Klebsiella pneumoniae	573	PRJNA355274	355274	Proteobacteria	Gammaproteobacteria	5.77376	56.8754	chromosome:NZ_CP018427.1/CP018427.1; plasmid pMNCRE69_1:NZ_CP018425.1/CP018425.1; plasmid pMNCRE69_2:NZ_CP018423.1/CP018423.1; plasmid pMNCRE69_3:NZ_CP018426.1/CP018426.1; plasmid pMNCRE69_4:NZ_CP018424.1/CP018424.1	-	5	5876	5605	12/13/16	2/22/17	Complete Genome	University of Minnesota	SAMN06067845	GCA_001902215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/215/GCA_001902215.1_ASM190221v1	-	MNCRE69
Salimicrobium jeotgali	1230341	PRJNA171727	171727	Terrabacteria group	Firmicutes	2.7124	46.3	-	AMPQ01	44	2778	2680	9/26/12	4/11/17	Contig	"Chung Ang university, Seoul, Korea"	SAMN02469590	GCA_000299295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/295/GCA_000299295.2_ASM29929v2	23144427	MJ3
Paenibacillus algorifonticola	684063	PRJEB17256	351414	Terrabacteria group	Firmicutes	7.46828	48.4	-	FONN01	76	6718	6398	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487969	GCA_900112925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/925/GCA_900112925.1_IMG-taxon_2617270911_annotated_assembly	-	CGMCC 1.10223
Catabacter hongkongensis	270498	PRJNA299543	299543	Terrabacteria group	Firmicutes	2.79711	48.8	-	LLYX01	113	2665	2561	1/7/16	4/11/17	Contig	Uppsala University	SAMN04209960	GCA_001507385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/385/GCA_001507385.1_ASM150738v1	-	ABBA15k
Staphylococcus argenteus	985002	PRJNA321471	321471	Terrabacteria group	Firmicutes	2.7542	32.5	chromosome:NZ_CP015758.1/CP015758.1	-	1	2739	2563	12/8/16	4/6/17	Chromosome	University Clinic Bonn	SAMN04994883	GCA_001891145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/145/GCA_001891145.1_ASM189114v1	27931949	BN75
Yersinia wautersii	1341643	PRJEB3989	221827	Proteobacteria	Gammaproteobacteria	5.01478	47.2	-	CBLG01	340	4680	4306	9/25/13	4/9/17	Scaffold	IP	SAMEA2272115	GCA_000493475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/475/GCA_000493475.1_1_WP-930601	-	WP-930601
Rhodospirillum sp. UBA1311	1947382	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.93482	64.9	-	DBTR01	105	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06454773	GCA_002307145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/145/GCA_002307145.1_ASM230714v1	28894102	-
Mycobacterium obuense	1807	PRJNA279894	279894	Terrabacteria group	Actinobacteria	6.38177	67.6	-	LAUZ02	249	6197	5860	4/21/15	4/10/17	Scaffold	UCSF	SAMN03451582	GCA_000974925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/925/GCA_000974925.2_ASM97492v2	26067960	UC1
Pseudomonas toyotomiensis	554344	PRJEB17410	351599	Proteobacteria	Gammaproteobacteria	5.48981	62.6	-	FOXK01	41	5202	5050	10/30/16	4/14/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216177	GCA_900115695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/695/GCA_900115695.1_IMG-taxon_2663762766_annotated_assembly	-	JCM 15604
Pseudomonas syringae pv. coryli str. NCPPB 4273	1397690	PRJNA218056	218056	Proteobacteria	Gammaproteobacteria	6.09633	59.2	-	AWQP01	93	5597	5305	4/15/15	4/10/17	Contig	CRA	SAMN03481961	GCA_000972175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/175/GCA_000972175.1_CLC6_0_3	24875383	NCPPB 4273
Sulfuricella sp. BIN3	1927147	PRJNA356961	356961	Proteobacteria	Betaproteobacteria	2.98015	59.3	-	MRWL01	1293	-	-	12/23/16	12/23/16	Contig	University of KwaZulu-Natal	SAMN06130431	GCA_001914305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/305/GCA_001914305.1_ASM191430v1	-	-
Chromobacterium vaccinii	1108595	PRJNA277476	277476	Proteobacteria	Betaproteobacteria	4.96763	64.4	-	JZJL01	152	4626	4406	4/9/15	4/10/17	Contig	Midwestern University	SAMN03393014	GCA_000971335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/335/GCA_000971335.1_ASM97133v1	25999572	MWU205
Lactobacillus apis	303541	PRJEB15031	336289	Terrabacteria group	Firmicutes	1.68255	36.8	-	FMAN01	17	1605	1515	8/3/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487793	GCA_900094785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/785/GCA_900094785.1_IMG-taxon_2617270705_annotated_assembly	-	R-53131
Devosia psychrophila	728005	PRJEB17207	351402	Proteobacteria	Alphaproteobacteria	4.32829	61.2	-	FOMB01	85	4246	3968	10/30/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488059	GCA_900112505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/505/GCA_900112505.1_IMG-taxon_2617270931_annotated_assembly	-	CGMCC 1.10210
Mycobacterium nebraskense	244292	PRJNA299467	299467	Terrabacteria group	Actinobacteria	6.72718	66.6	-	LQPH01	189	6331	5993	4/20/17	4/22/17	Contig	University of Trento	SAMN04216938	GCA_002102255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/255/GCA_002102255.1_ASM210225v1	-	DSM 44803
Devosia limi DSM 17137	1121477	PRJNA278773	278773	Proteobacteria	Alphaproteobacteria	4.47434	62.7	-	LAJF01	158	4232	4117	4/7/15	4/10/17	Contig	Agriculture and Agri-Food Canada	SAMN03431279	GCA_000970435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/435/GCA_000970435.1_ASM97043v1	25999556	DSM 17137
Methanosarcina horonobensis HB-1 = JCM 15518	1434110	PRJDB832	243738	Euryarchaeota	Methanomicrobia	4.92684	41.2	-	BBCW01	178	-	-	10/3/15	10/3/15	Contig	The University of Tokyo	SAMD00000526	GCA_001316205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/205/GCA_001316205.1_ASM131620v1	-	JCM 15518
Mycobacterium arupense	342002	PRJNA354248	354248	Terrabacteria group	Actinobacteria	4.44259	67.4	-	MVHH01	157	4186	3956	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064230	GCA_002086515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/515/GCA_002086515.1_ASM208651v1	-	DSM 44942
Klebsiella pneumoniae	573	PRJNA355274	355274	Proteobacteria	Gammaproteobacteria	5.77846	56.8698	chromosome:NZ_CP018428.1/CP018428.1; plasmid pMNCRE78_1:NZ_CP018431.1/CP018431.1; plasmid pMNCRE78_2:NZ_CP018429.1/CP018429.1; plasmid pMNCRE78_3:NZ_CP018432.1/CP018432.1; plasmid pMNCRE78_4:NZ_CP018430.1/CP018430.1	-	5	5884	5605	12/13/16	2/22/17	Complete Genome	University of Minnesota	SAMN06067846	GCA_001902195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/195/GCA_001902195.1_ASM190219v1	-	MNCRE78
Chania multitudinisentens RB-25	1441930	PRJNA232952	232952	Proteobacteria	Gammaproteobacteria	5.41319	50.8	-	JAJC01	107	4921	4721	2/10/14	4/9/17	Contig	University of Malaya	SAMN02567655	GCA_000568195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/195/GCA_000568195.1_De_Novo_Assembly	-	RB-25
Oleispira antarctica	188908	PRJNA320927	320927	Proteobacteria	Gammaproteobacteria	2.51816	42.8	-	MABE01	753	2625	2571	5/31/17	5/31/17	Scaffold	Lawrence Berkeley National Lab	SAMN05179578	GCA_002162965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/965/GCA_002162965.1_ASM216296v1	28652349	-
Klebsiella pneumoniae	573	PRJNA295237	295237	Proteobacteria	Gammaproteobacteria	5.69605	56.8612	chromosome:NZ_CP012753.1/CP012753.1; plasmid KP-plasmid1:NZ_CP012754.1/CP012754.1; plasmid KP-plasmid2:NZ_CP012755.1/CP012755.1	-	3	5669	5408	10/6/15	2/25/17	Complete Genome	"Korea National Institute of Health, Korea Centers for Disease Control & Prevention"	SAMN04044480	GCA_001307175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/175/GCA_001307175.1_ASM130717v1	26769936	KP617
Mycobacterium lepromatosis	480418	PRJNA281005	281005	Terrabacteria group	Actinobacteria	3.21582	58	-	LAWX01	39	-	-	4/21/15	5/27/15	Contig	The University of Texas MD Anderson Cancer Center	SAMN03481272	GCA_000975265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/975/265/GCA_000975265.1_ASM97526v1	25999555	FJ924
Domibacillus enclensis	1017273	PRJNA278100	278100	Terrabacteria group	Firmicutes	3.83295	46.5	-	LAHK01	101	3802	3661	3/30/15	4/10/17	Contig	Korea Polar Research Institute	SAMN03406601	GCA_000966185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/185/GCA_000966185.1_ASM96618v1	-	NIO-1016
Lactobacillus spicheri	216463	PRJNA276920	276920	Terrabacteria group	Firmicutes	2.85521	55.4	-	JZCR01	25	2655	2548	3/27/15	4/10/17	Contig	Huazhong Agricultural University	SAMN03382534	GCA_000965255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/255/GCA_000965255.1_ASM96525v1	-	LP38
Comamonas thiooxydans	363952	PRJDB2973	255378	Proteobacteria	Betaproteobacteria	5.24486	61.6	-	BBVD01	43	4796	4667	3/21/15	4/10/17	Contig	National Institute of Technology and Evaluation	SAMD00019661	GCA_000964545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/545/GCA_000964545.1_ASM96454v1	-	DSM 17888
Teredinibacter sp. 991H.S.0a.06	1286365	PRJNA187107	187107	Proteobacteria	Gammaproteobacteria	5.27903	51.1	-	LANC01	13	4322	4153	3/27/15	4/10/17	Contig	DOE Joint Genome Institute	SAMN02746020	GCA_000964255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/255/GCA_000964255.1_ASM96425v1	-	991H.S.0a.06
Acidocella aminolytica 101 = DSM 11237	1120923	PRJDB503	174854	Proteobacteria	Alphaproteobacteria	3.98473	58.9	-	BANC01	495	3817	3614	3/20/15	4/10/17	Scaffold	Kinki University	SAMD00036638	GCA_000964385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/385/GCA_000964385.1_ASM96438v1	-	101 = DSM 11237
Acetobacter syzygii	146476	PRJNA375758	375758	Proteobacteria	Alphaproteobacteria	2.97425	55.1	-	NDFP01	107	2764	2630	8/29/17	8/30/17	Contig	SysMilk	SAMN06718503	GCA_002276805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/805/GCA_002276805.1_ASM227680v1	-	KR-2
Mageeibacillus indolicus 0009-5	1284702	PRJNA187463	187463	Terrabacteria group	Firmicutes	1.73451	44.6	-	JPIC01	31	1502	1407	7/24/14	4/9/17	Contig	JCVI	SAMN02850928	GCA_000733145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/145/GCA_000733145.1_04_NF40_HMP1632v01	-	S7-24-11
Acetobacter orleanensis JCM 7639	1231342	PRJDB503	174854	Proteobacteria	Alphaproteobacteria	3.01364	56.4	-	BAMY01	269	2687	2542	3/20/15	4/10/17	Scaffold	Kinki University	SAMD00036634	GCA_000964205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/205/GCA_000964205.1_ASM96420v1	-	JCM 7639T
Acetobacter orientalis	146474	PRJNA253128	253128	Proteobacteria	Alphaproteobacteria	2.86821	52.4	-	JOMO01	106	2601	2475	5/19/17	5/24/17	Contig	Cornell University	SAMN02866224	GCA_002153475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/475/GCA_002153475.1_ASM215347v1	-	DmW_045
Acetobacter indonesiensis	104101	PRJNA253128	253128	Proteobacteria	Alphaproteobacteria	3.19172	54	-	JOMP01	72	2824	2690	5/19/17	5/24/17	Contig	Cornell University	SAMN02866225	GCA_002153515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/515/GCA_002153515.1_ASM215351v1	-	DmW_046
Sanguibacteroides justesenii	1547597	PRJNA254950	254950	FCB group	Bacteroidetes/Chlorobi group	3.41067	42	-	JPIT01	39	2836	2726	2/3/15	4/10/17	Contig	Odense University Hospital	SAMN02906675	GCA_000832085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/085/GCA_000832085.1_OUH334697_1.0	25814588	OUH 334697
Thermoproteus sp. AZ2	1609232	PRJNA273893	273893	TACK group	Crenarchaeota	1.69132	58	-	JZWT01	207	1965	1703	3/23/15	3/23/15	Contig	Center for Genomic Sciences	SAMN03323733	GCA_000960885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/885/GCA_000960885.1_ASM96088v1	-	-
Streptomyces rubellomurinus subsp. indigoferus	1615590	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.92572	73.9	-	JZKG01	2200	7831	6693	3/24/15	3/24/15	Contig	University of Illinois	SAMN03323310	GCA_000961865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/865/GCA_000961865.1_ASM96186v1	-	ATCC 31304
Vulcanisaeta sp. AZ3	1609231	PRJNA273893	273893	TACK group	Crenarchaeota	1.44634	42.4	-	JZWU01	478	1750	1493	3/23/15	3/23/15	Contig	Center for Genomic Sciences	SAMN03323735	GCA_000960865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/865/GCA_000960865.1_ASM96086v1	-	-
Azospirillum thiophilum	528244	PRJNA278815	278815	Proteobacteria	Alphaproteobacteria	7.63752	68.2	-	LAEL01	11	6720	6459	3/23/15	4/10/17	Contig	Kyungpook National University	SAMN03433605	GCA_000960825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/825/GCA_000960825.1_ASM96082v1	26545806	DSM 21654
Kosakonia oryzae	497725	PRJEB19719	377490	Proteobacteria	Gammaproteobacteria	5.53243	53.9	chromosome I:NZ_LT799040.1/LT799040.1	-	1	5274	5048	3/8/17	3/18/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216168	GCA_900168185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/185/GCA_900168185.1_IMG-taxon_2667527231_annotated_assembly	-	D4
Microbacterium azadirachtae	582680	PRJNA269724	269724	Terrabacteria group	Actinobacteria	4.03759	70.5	-	JYIT01	86	3780	3642	3/19/15	4/10/17	Contig	Austrian Institute of Technology	SAMN03256324	GCA_000956545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/545/GCA_000956545.1_ASM95654v1	-	DSM 23848
Terrabacter sp. Soil810	1736418	PRJNA298127	298127	Terrabacteria group	Actinobacteria	4.88878	71.5	-	LMSW01	16	4497	4328	11/2/15	4/11/17	Scaffold	ETH Zurich	SAMN04155683	GCA_001429645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/645/GCA_001429645.1_Soil810	26633631	Soil810
Elizabethkingia sp. C1558	1873419	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	4.40228	35.5	-	MBDS01	20	3991	3891	3/8/17	3/11/17	Contig	CDC	SAMN05335199	GCA_002023365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/365/GCA_002023365.1_ASM202336v1	-	C1558
Cronobacter malonaticus LMG 23826	1159491	PRJNA291037	291037	Proteobacteria	Gammaproteobacteria	4.47376	56.8337	chromosome:NZ_CP013940.1/CP013940.1; plasmid pCMA1:NZ_CP013941.1/CP013941.1; plasmid pCMA2:NZ_CP013942.1/CP013942.1	-	3	4346	4113	1/13/16	4/4/17	Complete Genome	Nestle Institute of Health Sciences	SAMN03938716	GCA_001277215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/215/GCA_001277215.2_ASM127721v2	27013041	LMG 23826
Aliivibrio wodanis	80852	PRJNA302718	302718	Proteobacteria	Gammaproteobacteria	4.56572	38.3	-	LNRI01	71	4149	3984	2/10/16	4/4/17	Contig	University of Cambridge	SAMN04279303	GCA_001557785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/785/GCA_001557785.1_ASM155778v1	-	CL1
Moritella viscosa	80854	PRJEB16014	348508	Proteobacteria	Gammaproteobacteria	5.11365	39.1	-	FRDT01	177	4621	4330	12/6/16	4/11/17	Contig	UNIVERSITY OF TROMSO	SAMEA4520409	GCA_900119925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/925/GCA_900119925.1_clc.v6.5.K58.01	-	-
Cronobacter malonaticus	413503	PRJNA217377	217377	Proteobacteria	Gammaproteobacteria	4.55994	56.8314	chromosome:NC_023032.1/CP006731.1; plasmid p1:NC_023024.1/CP006732.1; plasmid p2:NC_023025.1/CP006733.1	-	3	4451	4214	12/9/13	4/2/17	Complete Genome	"the National Institutes for food and drug Control,China"	SAMN02641531	GCA_000504545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/545/GCA_000504545.1_ASM50454v1	24435860	CMCC45402
Photobacterium iliopiscarium	56192	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.26218	38.9	-	JZSQ01	140	3832	3186	3/10/15	4/11/17	Contig	FDA/CFSAN	SAMN03295479	GCA_000950265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/265/GCA_000950265.1_CFSAN029431_01.0	-	ATCC 51760
Acholeplasma oculi	35623	PRJEB19584	376347	Terrabacteria group	Tenericutes	1.60017	31.3	-	FUZK01	7	1516	1446	3/9/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745122	GCA_900166985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/985/GCA_900166985.1_IMG-taxon_2585428188_annotated_assembly	-	ATCC 27350
Photobacterium kishitanii	318456	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	5.1258	38.7	-	JZTC01	102	4601	4236	3/10/15	4/3/17	Contig	FDA/CFSAN	SAMN03295467	GCA_000949965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/965/GCA_000949965.1_CFSAN029419_01.0	25931609	GCSL-A1-3
Candidatus Brocadia sinica	795830	PRJNA274364	274364	PVC group	Planctomycetes	3.89577	42.3	-	JZEK01	86	3694	3650	2/24/16	4/19/16	Contig	Radboud University Nijmegen	SAMN03372521	GCA_001567345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/345/GCA_001567345.1_ASM156734v1	27029554	-
Ruthenibacterium lactatiformans	1550024	PRJNA300500	300500	Terrabacteria group	Firmicutes	3.95153	56.6	-	LMUA01	108	3846	3576	12/22/15	4/11/17	Contig	Pirogov Russian National Research Medical University	SAMN04224338	GCA_001481375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/375/GCA_001481375.1_ASM148137v1	-	668
Clostridium aceticum	84022	PRJNA274894	274894	Terrabacteria group	Firmicutes	4.15871	35.2	-	JYHU01	51	3810	3709	3/6/15	4/10/17	Scaffold	Korean Advanced Institute of Science and Technology	SAMN03333331	GCA_000949285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/285/GCA_000949285.1_ASM94928v1	25931594	DSM 1496
Rickettsia raoultii	369822	PRJNA276402	276402	Proteobacteria	Alphaproteobacteria	1.48328	32.6317	chromosome:NZ_CP010969.1/CP010969.1; plasmid pRra1:NZ_CP010970.1/CP010970.1; plasmid pRra2:NZ_CP010971.1/CP010971.1; plasmid pRra3:NZ_CP010972.1/CP010972.1	-	4	1591	1235	3/4/15	8/18/16	Chromosome	Aix-Marseille Universite	SAMN03372504	GCA_000940955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/955/GCA_000940955.1_ASM94095v1	27103706	Khabarovsk
Halomonas meridiana	29570	PRJEB18163	355451	Proteobacteria	Gammaproteobacteria	3.84974	57	-	FSQX01	2	3724	3504	12/14/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05878438	GCA_900128865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/865/GCA_900128865.1_IMG-taxon_2698537012_annotated_assembly	-	ACAM 239
Sulfitobacter pseudonitzschiae	1402135	PRJNA235147	235147	Proteobacteria	Alphaproteobacteria	4.94529	61.7	-	JAMD01	80	4798	4702	6/26/14	4/9/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02854525	GCA_000712315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/315/GCA_000712315.1_SOAPdenovo_v1.05	-	H3
Pseudomonas meliae	86176	PRJNA274688	274688	Proteobacteria	Gammaproteobacteria	5.14364	58.4	-	JYHE01	360	4941	4311	3/2/15	4/11/17	Contig	INRA	SAMN03328996	GCA_000935675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/675/GCA_000935675.1_PMCFBP3225-G1	25931602	CFBP 3225
Jiangella alkaliphila	419479	PRJNA281958	281958	Terrabacteria group	Actinobacteria	7.56784	72.2	-	LBMC01	124	6969	6741	5/8/15	4/10/17	Scaffold	Yunnan Institute of Microbiology	SAMN03497963	GCA_001005145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/145/GCA_001005145.1_ASM100514v1	26139721	KCTC 19222
Marinobacter adhaerens HP15	225937	PRJNA46089	46089	Proteobacteria	Gammaproteobacteria	4.65172	56.8223	chromosome:NC_017506.1/CP001978.1; plasmid pHP-187:NC_017507.1/CP001980.1; plasmid pHP-42:NC_017508.1/CP001979.1	-	3	4354	4211	11/9/10	5/19/17	Complete Genome	Jacobs University gGmbH	SAMN00713638	GCA_000166295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/295/GCA_000166295.1_ASM16629v1	21304739	HP15
Mastigocladus laminosus 74	1913078	PRJNA350610	350610	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.326	41.9	-	MNPM01	57	5506	4386	2/9/17	4/17/17	Scaffold	Indian Institute Of Chemical biology	SAMN05942614	GCA_001990805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/805/GCA_001990805.1_ASM199080v1	-	74
Aneurinibacillus migulanus	47500	PRJNA289541	289541	Terrabacteria group	Firmicutes	6.3019	42.9	-	LIXL01	278	6305	5977	9/18/15	4/4/17	Contig	University of Neuchatel	SAMN03854604	GCA_001294525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/525/GCA_001294525.1_ASM129452v1	26679577	Nagano E1
Cronobacter sakazakii SP291	956149	PRJNA62201	62201	Proteobacteria	Gammaproteobacteria	4.51878	56.8162	chromosome:NC_020260.1/CP004091.1; plasmid pSP291-1:NC_020263.1/CP004092.1; plasmid pSP291-2:NC_020261.1/CP004093.1; plasmid pSP291-3:NC_020262.1/CP004094.1	-	4	4394	4165	2/11/13	4/1/17	Complete Genome	University College Dublin	SAMN02604116	GCA_000339015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/015/GCA_000339015.1_ASM33901v1	23516209	Sp291
Klebsiella pneumoniae	573	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	5.79861	56.8151	chromosome:NZ_CP021950.1/CP021950.1; plasmid tig00000168_pilon:NZ_CP021951.1/CP021951.1; plasmid tig00000169_pilon:NZ_CP021952.1/CP021952.1; plasmid tig00000185_pilon:NZ_CP021953.1/CP021953.1; plasmid tig00001025alt_u_pilon:NZ_CP021954.1/CP021954.1	-	5	5941	5650	6/20/17	6/22/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014989	GCA_002202255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/255/GCA_002202255.1_ASM220225v1	-	AR_0148
Mycobacterium llatzerense	280871	PRJNA293498	293498	Terrabacteria group	Actinobacteria	6.69782	66.3	-	LIPZ01	235	6552	6231	11/2/16	4/13/17	Contig	Eau de Paris / UMR 7267 EBI	SAMN04004267	GCA_001865165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/165/GCA_001865165.1_ASM186516v1	-	EDP_4
Micromonospora carbonacea	47853	PRJNA273690	273690	Terrabacteria group	Actinobacteria	7.62689	73.9	-	JXSX01	3	6413	6230	2/17/15	4/10/17	Contig	Jiangxi Normal University	SAMN03295202	GCA_000876225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/225/GCA_000876225.1_ASM87622v1	25858830	JXNU-1
Jannaschia aquimarina	935700	PRJEB21428	391648	Proteobacteria	Alphaproteobacteria	4.11771	66.4	-	FZPF01	37	4055	3943	7/13/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421775	GCA_900188045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/045/GCA_900188045.1_IMG-taxon_2681813552_annotated_assembly	-	DSM 28248
Frigoribacterium sp. Leaf44	1736220	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.37351	71.1	-	LMLG01	11	3141	3025	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151600	GCA_001421865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/865/GCA_001421865.1_Leaf44	26633631	Leaf44
Pseudomonas abietaniphila	89065	PRJDB3350	275726	Proteobacteria	Gammaproteobacteria	6.88625	59.4	-	BBQJ01	140	6326	6126	2/17/15	4/18/17	Contig	National Institute of Advanced Industrial Science and Technology (AIST)	SAMD00023455	GCA_000974525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/525/GCA_000974525.1_ASM97452v1	25977441	KF701
Anoxybacillus ayderensis	265546	PRJNA236114	236114	Terrabacteria group	Firmicutes	2.57701	41.9	-	NDEZ01	92	2717	2562	5/2/17	5/6/17	Contig	The Pennsylvania State University	SAMN06675368	GCA_002117565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/565/GCA_002117565.1_ASM211756v1	-	MT-Cab
Myroides profundi	480520	PRJEB17007	351162	FCB group	Bacteroidetes/Chlorobi group	4.00438	33.8	-	FOFY01	33	3589	3427	10/29/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488089	GCA_900111065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/065/GCA_900111065.1_IMG-taxon_2622736514_annotated_assembly	-	DSM 19823
Rickettsia hoogstraalii str. RCCE3	1359197	PRJNA212458	212458	Proteobacteria	Alphaproteobacteria	2.30309	32.4	-	LAOB01	49	2517	2479	3/27/15	3/27/15	Contig	IGS	SAMN02585091	GCA_000964845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/845/GCA_000964845.1_ASM96484v1	-	RCCE3
Wolbachia endosymbiont of Dactylopius coccus	1605993	PRJNA274698	274698	Proteobacteria	Alphaproteobacteria	1.49775	34	-	LSYY01	198	1530	1041	5/19/16	4/12/17	Contig	Universidad Nacional Autonoma de Mexico	SAMN03330029	GCA_001648015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/015/GCA_001648015.1_ASM164801v1	-	wDacB
Flavobacterium hibernum	37752	PRJNA354433	354433	FCB group	Bacteroidetes/Chlorobi group	5.30502	33.2	-	MUGX01	65	4520	4420	7/12/17	7/14/17	Scaffold	FDA	SAMN06049058	GCA_002217315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/315/GCA_002217315.1_ASM221731v1	-	ATCC 51468
Bacillus badius	1455	PRJNA271419	271419	Terrabacteria group	Firmicutes	4.06386	43.8	-	JXLO01	22	4147	3982	1/27/15	4/10/17	Contig	Institute of Microbial Technology	SAMN03282436	GCA_000829555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/555/GCA_000829555.1_ASM82955v1	-	DSM 30822
Nocardia vulneris	1141657	PRJDB4075	290876	Terrabacteria group	Actinobacteria	9.37761	68.1	-	BDCI01	74	8459	8251	4/1/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00040670	GCA_001613425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/425/GCA_001613425.1_ASM161342v1	-	NBRC 108936
Klebsiella pneumoniae	573	PRJNA246471	246471	Proteobacteria	Gammaproteobacteria	5.75226	56.809	chromosome:NZ_CP018671.1/CP018671.1; plasmid pCAV1042-183:NZ_CP018670.1/CP018670.1; plasmid pCAV1042-2781:NZ_CP018665.1/CP018665.1; plasmid pCAV1042-3223:NZ_CP018666.1/CP018666.1; plasmid pCAV1042-5566:NZ_CP018667.1/CP018667.1; plasmid pKPC_CAV1042-44:NZ_CP018668.1/CP018668.1; plasmid pKPC_CAV1042-89:NZ_CP018669.1/CP018669.1	-	7	5810	5500	12/19/16	2/22/17	Complete Genome	University of Oxford	SAMN03024576	GCA_001908515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/515/GCA_001908515.1_ASM190851v1	-	CAV1042
Cohnella sp. CIP 111063	1955714	PRJNA373949	373949	Terrabacteria group	Firmicutes	8.24221	56.7	-	MWSG01	59	7008	6808	8/1/17	8/3/17	Scaffold	CSIR- National Chemical Laboratory	SAMN06319183	GCA_002237815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/815/GCA_002237815.1_ASM223781v1	-	CIP 111063
Lactobacillus hokkaidonensis	1193095	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.32933	38.1	-	JQCH01	84	2282	2183	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02797790	GCA_001437505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/505/GCA_001437505.1_ASM143750v1	26415554	DSM 26202
Klebsiella pneumoniae subsp. pneumoniae Kp13	1123862	PRJNA78291	78291	Proteobacteria	Gammaproteobacteria	5.73989	56.8079	chromosome:NZ_CP003999.1/CP003999.1; plasmid pKP13a:NZ_CP003996.1/CP003996.1; plasmid pKP13b:NZ_CP003994.1/CP003994.1; plasmid pKP13c:NZ_CP003995.1/CP003995.1; plasmid pKP13d:NZ_CP003997.1/CP003997.1; plasmid pKP13e:NZ_CP003998.1/CP003998.1; plasmid pKP13f:NZ_CP004000.1/CP004000.1	-	7	5777	5478	12/30/13	2/21/17	Complete Genome	Laboratório Nacional de Computação Científica	SAMN02641520	GCA_000512165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/165/GCA_000512165.1_ASM51216v1	24450656	Kp13
Alcaligenes faecalis	511	PRJNA276624	276624	Proteobacteria	Betaproteobacteria	4.24868	56.807	chromosome:NZ_CP013119.1/CP013119.1; plasmid pZD02:NZ_CP013143.1/CP013143.1	-	2	3885	3785	11/17/15	4/4/17	Complete Genome	Huazhong Agricultural University (HZAU)	SAMN03379009	GCA_000967305.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/305/GCA_000967305.2_ASM96730v2	-	ZD02
Sporosarcina koreensis	334735	PRJNA307583	307583	Terrabacteria group	Firmicutes	4.3402	44.4	-	LQYA01	425	4332	4044	1/22/16	4/11/17	Scaffold	Cornell University	SAMN04383605	GCA_001531445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/445/GCA_001531445.1_ASM153144v1	26988039	Q1
Klebsiella pneumoniae	573	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	5.83829	56.8012	chromosome:NZ_CP020061.1/CP020061.1; plasmid unitig_1:NZ_CP020062.1/CP020062.1; plasmid unitig_2:NZ_CP020063.1/CP020063.1; plasmid unitig_3:NZ_CP020064.1/CP020064.1; plasmid unitig_4:NZ_CP020065.1/CP020065.1; plasmid unitig_5:NZ_CP020066.1/CP020066.1	-	6	5838	5514	3/21/17	3/23/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014958	GCA_002055765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/765/GCA_002055765.1_ASM205576v1	-	AR_0117
Pseudomonas xanthomarina	271420	PRJEB7265	264510	Proteobacteria	Gammaproteobacteria	5.05197	62.3	-	CCYE01	73	4808	4587	11/4/14	4/10/17	Contig	GMGM	SAMEA2786271	GCA_000825645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/645/GCA_000825645.1_PXNS11.v1	-	S11
Mesorhizobium plurifarium	69974	PRJEB6721	261144	Proteobacteria	Alphaproteobacteria	7.63927	63.6	-	CCMZ01	76	7413	7124	9/15/14	4/10/17	Scaffold	IRD	SAMEA2677841	GCA_000824745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/745/GCA_000824745.1_ORS3356-Illumina	-	-
Pseudomonas rhodesiae	76760	PRJEB6356	248365	Proteobacteria	Gammaproteobacteria	6.05006	60.4	-	CCYI01	14	5540	5340	10/18/14	4/10/17	Contig	URMITE	SAMEA2821761	GCA_000821225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/225/GCA_000821225.1_Pseudomonas_rhodesiae_FF9	-	FF9
Aeromonas piscicola	600645	PRJEB7033	267804	Proteobacteria	Gammaproteobacteria	5.17797	59.2	-	CDBL01	91	4894	4595	11/24/14	4/10/17	Scaffold	UCONNMISEQ	SAMEA2752415	GCA_000820005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/005/GCA_000820005.1_PRJEB7033	-	LMG 24783
Geoalkalibacter ferrihydriticus	392333	PRJEB16169	348909	Proteobacteria	delta/epsilon subdivisions	3.81829	57.9	-	FNGU01	22	3486	3363	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660860	GCA_900103065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/065/GCA_900103065.1_IMG-taxon_2599185148_annotated_assembly	-	DSM 17813
Aeromonas schubertii	652	PRJEB7038	267809	Proteobacteria	Gammaproteobacteria	4.12625	61.7	-	CDDB01	111	3922	3730	11/24/14	4/10/17	Scaffold	UCONNMISEQ	SAMEA2752410	GCA_000820105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/105/GCA_000820105.2_PRJEB7038	-	CECT 4240
Chromohalobacter japonicus	223900	PRJNA357624	357624	Proteobacteria	Gammaproteobacteria	3.76792	60.5	-	MSDQ01	110	3561	3376	1/5/17	4/16/17	Contig	University of Southern Mississippi	SAMN06146126	GCA_001937175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/175/GCA_001937175.1_ASM193717v1	-	SMB17
Salinicoccus roseus	45670	PRJNA391828	391828	Terrabacteria group	Firmicutes	2.54114	49.6	-	NPEZ01	16	2582	2482	8/22/17	8/24/17	Contig	UC Davis	SAMN07309612	GCA_002265785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/785/GCA_002265785.1_ASM226578v1	-	BU-1
Aeromonas allosaccharophila	656	PRJEB7019	266402	Proteobacteria	Gammaproteobacteria	4.66384	58.4	-	CDBR01	120	4304	4065	11/4/14	4/10/17	Scaffold	UCONNMISEQ	SAMEA2752428	GCA_000819685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/685/GCA_000819685.1_PRJEB7019	-	CECT 4199
Celeribacter indicus	1208324	PRJEB16572	349888	Proteobacteria	Alphaproteobacteria	4.81614	65.8	-	FNNW01	84	4711	4574	10/22/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443573	GCA_900106965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/965/GCA_900106965.1_IMG-taxon_2693429899_annotated_assembly	-	P73
Candidatus Riesia pediculischaeffi PTSU	1401651	PRJNA218799	218799	Proteobacteria	Gammaproteobacteria	0.581916	32	-	AWXV01	6	518	450	1/12/15	4/10/17	Scaffold	University of Florida	SAMN03275777	GCA_000817295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/295/GCA_000817295.2_ASM81729v2	25213693	PTSU
Enterobacter ludwigii	299767	PRJNA268890	268890	Proteobacteria	Gammaproteobacteria	4.95277	54.6	-	JTLO01	2	4754	4532	1/15/15	4/2/17	Contig	Chengdu Military General Hospital	SAMN03246119	GCA_000818595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/595/GCA_000818595.1_ASM81859v1	-	EN-119
Pseudomonas balearica	74829	PRJNA305687	305687	Proteobacteria	Gammaproteobacteria	4.36315	64.9	-	LONF02	45	4067	3949	2/25/16	4/17/17	Scaffold	University of Gothenburg - CCUG	SAMN04334590	GCA_001575025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/025/GCA_001575025.2_ASM157502v2	-	st101
Komagataeibacter intermedius TF2	1231353	PRJDB503	174854	Proteobacteria	Alphaproteobacteria	3.88353	61.6	-	BANF01	943	3517	3273	3/20/15	4/10/17	Scaffold	Kinki University	SAMD00036641	GCA_000964425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/425/GCA_000964425.1_ASM96442v1	-	TF2
Clostridium argentinense CDC 2741	1418104	PRJNA225821	225821	Terrabacteria group	Firmicutes	4.74256	28.6	-	AYSO01	20	4255	4044	1/8/15	4/10/17	Contig	Los Alamos National Laboratory	SAMN03222824	GCA_000816675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/675/GCA_000816675.1_CAD_IHQD	25489752	CDC 2741
Halomonas caseinilytica	438744	PRJEB16883	351001	Proteobacteria	Gammaproteobacteria	3.56935	63.4	-	FOBT01	28	3414	3280	10/29/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487952	GCA_900109905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/905/GCA_900109905.1_IMG-taxon_2617270935_annotated_assembly	-	CGMCC 1.6773
Desulfococcus multivorans	897	PRJNA376441	376441	Proteobacteria	delta/epsilon subdivisions	4.45598	56.8	chromosome:NZ_CP019913.2/CP019913.2	-	1	3927	3810	3/2/17	3/11/17	Complete Genome	California Institute of Technology	SAMN06392868	GCA_002009335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/335/GCA_002009335.2_ASM200933v2	-	DSM 2059
Flavihumibacter sp. CACIAM 22H1	1812911	PRJNA314789	314789	FCB group	Bacteroidetes/Chlorobi group	4.8715	43.8	-	LUKG01	169	4309	3788	3/29/16	3/29/16	Scaffold	Universidade Federal do Para	SAMN04547021	GCA_001601815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/815/GCA_001601815.1_ASM160181v1	-	-
Microbacterium hominis	162426	PRJNA269640	269640	Terrabacteria group	Actinobacteria	2.88781	69.4	-	JWSZ01	28	2750	2636	1/2/15	4/10/17	Contig	University of Malaya	SAMN03256222	GCA_000813805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/805/GCA_000813805.1_ASM81380v1	-	TPW29
Morococcus cerebrosus	1056807	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	2.5787	51.4	-	JVJK01	449	2460	2253	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197570	GCA_001063255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/255/GCA_001063255.1_ASM106325v1	26230489	379_NMEN
Sulfurospirillum cavolei NBRC 109482	1349788	PRJDB1373	231429	Proteobacteria	delta/epsilon subdivisions	2.83318	43.8	-	BBQE01	27	2856	2777	12/13/14	4/10/17	Contig	National Institute of Technology and Evaluation	SAMD00023477	GCA_000813325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/325/GCA_000813325.1_ASM81332v1	-	NBRC 109482
Chryseobacterium jeonii	266749	PRJEB17132	351316	FCB group	Bacteroidetes/Chlorobi group	3.25193	34.9	-	FOLA01	37	3008	2926	10/30/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421876	GCA_900112115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/115/GCA_900112115.1_IMG-taxon_2675903156_annotated_assembly	-	DSM 17048
Tepidimonas taiwanensis	307486	PRJNA305870	305870	Proteobacteria	Betaproteobacteria	2.84916	68.8	-	LOQE01	230	2667	2526	12/22/15	4/11/17	Contig	IISER Bhopal	SAMN04335017	GCA_001481285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/285/GCA_001481285.1_ASM148128v1	26893423	MB2
Pantoea rodasii	1076549	PRJNA252990	252990	Proteobacteria	Gammaproteobacteria	5.75146	53.9	-	MLFP01	86	5350	4498	4/18/17	4/18/17	Contig	University of Pretoria	SAMN05907788	GCA_002095465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/465/GCA_002095465.1_ASM209546v1	28255640	LMG 26273
Mycobacterium setense	431269	PRJNA268177	268177	Terrabacteria group	Actinobacteria	6.06553	66.5	-	JTLZ01	22	5732	5603	12/19/14	4/10/17	Contig	IMPPC (Institute of Predictive and Personalized Medicine of Cancer )	SAMN03203477	GCA_000805375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/375/GCA_000805375.1_ASM80537v1	25657273	Manresensis
Acetobacter aceti	435	PRJNA311264	311264	Proteobacteria	Alphaproteobacteria	3.72504	56.8	chromosome:NZ_CP014692.1/CP014692.1	-	1	3412	3185	2/22/17	2/24/17	Complete Genome	Technische Universitaet Muenchen	SAMN04396917	GCA_002005445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/445/GCA_002005445.1_ASM200544v1	-	TMW2.1153
Chromobacterium subtsugae	251747	PRJNA270006	270006	Proteobacteria	Betaproteobacteria	4.67469	64.8	-	JWJN01	95	4388	4240	12/31/14	4/3/17	Contig	University of Malaya	SAMN03262492	GCA_000812805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/805/GCA_000812805.1_ASM81280v1	-	F49
Rothia aeria	172042	PRJDB5208	350813	Terrabacteria group	Actinobacteria	2.58868	56.8	chromosome:AP017895.1	-	1	2855	2799	10/26/16	10/26/16	Complete Genome	Osaka Dental University	SAMD00064392	GCA_002355935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/935/GCA_002355935.1_ASM235593v1	-	JCM 11412
Pseudomonas flexibilis	706570	PRJNA260875	260875	Proteobacteria	Gammaproteobacteria	3.76269	65.8	-	JRUD01	49	3566	3457	12/16/14	4/9/17	Contig	Korea University	SAMN03066960	GCA_000802425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/425/GCA_000802425.1_ASM80242v1	-	ATCC 29606
Desulfococcus multivorans	897	PRJNA310394	310394	Proteobacteria	delta/epsilon subdivisions	4.4554	56.8	chromosome:NZ_CP015381.1/CP015381.1	-	1	3931	3813	10/26/16	4/13/17	Complete Genome	" Federal Research Institute for Rural Areas, Forestry, and Fisheries, Thuenen Institute of Forest Genetics"	SAMN04893606	GCA_001854245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/245/GCA_001854245.1_ASM185424v1	-	DSM 2059
Collimonas arenae	279058	PRJNA299263	299263	Proteobacteria	Betaproteobacteria	4.72399	56.8	chromosome:NZ_CP013233.1/CP013233.1	-	1	4357	3761	3/9/16	4/12/17	Complete Genome	Netherlands Institute of Ecology	SAMN04195675	GCA_001584165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/165/GCA_001584165.1_ASM158416v1	-	Ter10
Desulfotomaculum sp. 46_296	1635262	PRJNA278302	278302	Terrabacteria group	Firmicutes	2.32814	45.8	-	LGFZ01	136	2345	2345	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445153	GCA_001508375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/375/GCA_001508375.1_ASM150837v1	26787827	-
Collimonas arenae	279058	PRJNA299269	299269	Proteobacteria	Betaproteobacteria	4.70938	56.8	chromosome:NZ_CP013235.1/CP013235.1	-	1	4279	4061	3/9/16	4/12/17	Complete Genome	Netherlands Institute of Ecology	SAMN04195676	GCA_001584205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/205/GCA_001584205.1_ASM158420v1	-	Ter282
Leisingera sp. ANG-Vp	1577896	PRJNA269051	269051	Proteobacteria	Alphaproteobacteria	5.15015	62.4	-	JWLD01	143	4892	4707	1/2/15	4/10/17	Scaffold	University of Connecticut	SAMN03246059	GCA_000813725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/725/GCA_000813725.1_ASM81372v1	25755651	ANG-Vp
Aureimonas altamirensis	370622	PRJNA260421	260421	Proteobacteria	Alphaproteobacteria	4.20005	65.2	-	JRFJ01	13	4017	3912	12/9/14	4/10/17	Contig	Public Health Ontario	SAMN03022368	GCA_000800175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/175/GCA_000800175.1_ASM80017v1	-	ON-56566
Cetobacterium sp. ZWU0022	1340502	PRJNA205587	205587	Fusobacteria	Fusobacteriia	2.75452	30	-	JRJZ01	197	2586	2511	12/11/14	4/9/17	Contig	University of Oregon	SAMN03021539	GCA_000800875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/875/GCA_000800875.1_ZWU0022.1	-	ZWU0022
Xenorhabdus sp. NBAII XenSa04	1429873	PRJNA229915	229915	Proteobacteria	Gammaproteobacteria	4.41158	42.9	-	JTHK01	453	3726	3401	12/8/14	4/9/17	Scaffold	Washington State University	SAMN03198697	GCA_000798625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/625/GCA_000798625.1_ASM79862v1	-	NBAII XenSa04
Robinsoniella peoriensis	180332	PRJEB15237	344154	Terrabacteria group	Firmicutes	7.20211	41.1	-	FMJR01	160	5866	5656	9/23/16	4/13/17	Contig	LSHTM	SAMEA4393858	GCA_900096675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/096/675/GCA_900096675.1_R.p.6600698_assembly	-	-
Streptacidiphilus jiangxiensis	235985	PRJEB16846	350965	Terrabacteria group	Actinobacteria	9.53863	72.2	-	FOAZ01	94	8722	8360	10/29/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05414137	GCA_900109465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/465/GCA_900109465.1_IMG-taxon_2675903135_annotated_assembly	-	CGMCC 4.1857
Sulfobacillus acidophilus TPY	1051632	PRJNA68423	68423	Terrabacteria group	Firmicutes	3.55121	56.8	chromosome:CP002901.1	-	1	3837	3754	7/5/11	1/30/14	Complete Genome	Beijing Institute of Genomics	SAMN02603016	GCA_000219855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/855/GCA_000219855.1_ASM21985v1	-	TPY
Sulfobacillus acidophilus DSM 10332	679936	PRJNA40777	40777	Terrabacteria group	Firmicutes	3.55783	56.7881	chromosome:CP003179.1; plasmid unnamed:CP003180.1	-	2	3695	3471	12/14/11	2/18/15	Complete Genome	DOE Joint Genome Institute	SAMN02232055	GCA_000237975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/975/GCA_000237975.1_ASM23797v1	-	DSM 10332
Klebsiella pneumoniae subsp. pneumoniae PittNDM01	1406314	PRJNA221868	221868	Proteobacteria	Gammaproteobacteria	5.8123	56.7812	chromosome:NZ_CP006798.1/CP006798.1; plasmid plasmid1:NZ_CP006799.1/CP006799.1; plasmid plasmid2:NZ_CP006800.1/CP006800.1; plasmid plasmid3:NZ_CP006801.1/CP006801.1; plasmid plasmid4:NZ_CP006802.1/CP006802.1	-	5	5815	5519	7/24/14	2/21/17	Complete Genome	University of Pittsburgh	SAMN03081487	GCA_000733255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/255/GCA_000733255.1_ASM73325v1	25070096	PittNDM01
Kocuria polaris	136273	PRJNA307146	307146	Terrabacteria group	Actinobacteria	3.83372	72.6	-	LQBK01	42	3462	3340	12/31/15	4/11/17	Contig	Institute of Microbial Technology	SAMN04376032	GCA_001483755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/483/755/GCA_001483755.1_ASM148375v1	-	CD08_4
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.53198	50.9	-	MPQE01	48	2459	2375	3/6/17	3/9/17	Contig	Harvard University	SAMN06016251	GCA_002020215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/215/GCA_002020215.1_ASM202021v1	-	-
Bdellovibrio sp. ArHS	1569284	PRJNA266262	266262	Proteobacteria	Oligoflexia	3.53942	47	-	JTEV01	47	3395	3107	11/21/14	11/21/14	Contig	University of Delhi	SAMN03160574	GCA_000786105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/105/GCA_000786105.1_ASM78610v1	-	-
Pimelobacter simplex	2045	PRJEB17487	351664	Terrabacteria group	Actinobacteria	5.63183	72.9	-	FOUK01	12	5524	5405	10/31/16	4/14/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421671	GCA_900114845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/845/GCA_900114845.1_IMG-taxon_2687453782_annotated_assembly	-	ATCC 6946
Bacillus xiamenensis	1178537	PRJNA162763	162763	Terrabacteria group	Firmicutes	3.61192	41.3	-	AMSH01	134	3719	3587	10/1/12	4/10/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02471164	GCA_000300535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/535/GCA_000300535.1_ASM30053v1	23209239	HYC-10
Candidatus Thiomargarita nelsonii	1003181	PRJNA311265	311265	Proteobacteria	Gammaproteobacteria	4.83095	42.1	-	LUTY01	3164	5553	5532	5/6/16	5/6/16	Scaffold	Max Planck Institute for Marine Microbiology	SAMN04479841	GCA_001640045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/045/GCA_001640045.1_THIOM	-	THI036
Bacillus aryabhattai	412384	PRJNA255059	255059	Terrabacteria group	Firmicutes	5.10513	38.1	-	JPIE01	37	5220	5091	11/17/14	4/2/17	Contig	85303	SAMN02909700	GCA_000785045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/045/GCA_000785045.1_ASM78504v1	-	GZ03
Halopiger salifodinae	1202768	PRJEB16954	351075	Euryarchaeota	Halobacteria	4.27217	65.4	-	FOIS01	8	4065	3929	10/29/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216285	GCA_900110455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/455/GCA_900110455.1_IMG-taxon_2671180170_annotated_assembly	-	CGMCC 1.12284
Dermabacter hominis NBRC 106157	1349750	PRJDB1334	231390	Terrabacteria group	Actinobacteria	2.15527	63.2	-	BCSI01	28	1930	1847	2/10/16	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00046478	GCA_001570785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/785/GCA_001570785.1_ASM157078v1	-	NBRC 106157
Klebsiella pneumoniae	573	PRJNA296771	296771	Proteobacteria	Gammaproteobacteria	5.8056	56.7804	chromosome:NZ_CP016923.1/CP016923.1; plasmid unnamed1:NZ_CP016919.1/CP016919.1; plasmid unnamed1:NZ_CP016922.1/CP016922.1; plasmid unnamed2:NZ_CP016920.1/CP016920.1; plasmid unnamed2:NZ_CP016921.1/CP016921.1	-	5	5813	5493	8/23/16	2/21/17	Complete Genome	Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion	SAMN04448229	GCA_001709275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/275/GCA_001709275.1_ASM170927v1	-	-
Pseudomonas mediterranea CFBP 5447	1348058	PRJNA210952	210952	Proteobacteria	Gammaproteobacteria	6.31969	61.2	-	AUPB01	32	5623	5478	11/10/14	4/9/17	Scaffold	Parco Scientifico e tecnologico della Sicilia s.c.p.a.	SAMN03112705	GCA_000774145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/145/GCA_000774145.1_ASM77414v1	25540338	CFBP 5447
Gallibacterium genomosp. 1	155515	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.38106	38.3	-	JTJP01	81	2268	2116	7/2/16	4/13/17	Contig	University of Copenhagen	SAMN03220403	GCA_001678575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/575/GCA_001678575.1_Gal28	-	CCM5975
Vibrio caribbeanicus	701175	PRJNA264129	264129	Proteobacteria	Gammaproteobacteria	4.56868	46.2	-	JRWR01	51	4187	4066	11/19/14	4/9/17	Contig	University of Malaya	SAMN03113153	GCA_000785575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/575/GCA_000785575.1_ASM78557v1	-	T14
Anoxybacillus gonensis	198467	PRJNA264351	264351	Terrabacteria group	Firmicutes	2.75833	41.5	-	JRZG01	56	2945	2801	10/31/14	4/9/17	Contig	Universiti Teknologi Malaysia	SAMN03121471	GCA_000770375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/375/GCA_000770375.1_ASM77037v1	-	G2
Elizabethkingia miricola	172045	PRJNA259681	259681	FCB group	Bacteroidetes/Chlorobi group	4.57811	35.9	-	JRFN01	75	4308	4160	10/27/14	4/2/17	Contig	Oklahoma State University	SAMN02989770	GCA_000769445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/445/GCA_000769445.1_ASM76944v1	26205869	ATCC 33958
Corynebacterium camporealensis	161896	PRJNA262863	262863	Terrabacteria group	Actinobacteria	2.44081	59.4	-	JRUB01	7	2309	1822	10/14/14	4/9/17	Contig	UFMG Brazil	SAMN03092874	GCA_000766885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/766/885/GCA_000766885.1_ASM76688v1	-	CIP 105508
Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133	862422	PRJDB966	243799	Terrabacteria group	Actinobacteria	1.2145	69.9	-	BBGU01	1146	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016955	GCA_001313965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/965/GCA_001313965.1_ASM131396v1	-	JCM 9966
Aquabacterium sp. UBA666	1946043	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	3.5574	65.8	-	DBNS01	83	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457816	GCA_002299825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/825/GCA_002299825.1_ASM229982v1	28894102	-
Pantoea rwandensis	1076550	PRJNA252996	252996	Proteobacteria	Gammaproteobacteria	5.7754	52.6	-	MLFR01	69	5351	5007	4/18/17	4/21/17	Contig	University of Pretoria	SAMN05907793	GCA_002095475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/475/GCA_002095475.1_ASM209547v1	28255640	LMG 26275
Listeria newyorkensis	1497681	PRJNA246332	246332	Terrabacteria group	Firmicutes	3.51544	42.9	-	JNFB01	47	3369	3270	10/10/14	2/27/17	Contig	Cornell University	SAMN02754401	GCA_000766145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/766/145/GCA_000766145.1_ASM76614v1	25342111	FSL M6-0635
Porphyromonas canoris	36875	PRJNA253613	253613	FCB group	Bacteroidetes/Chlorobi group	2.20254	44.8	-	JQZV01	14	1860	1768	10/27/14	4/9/17	Contig	UC Davis	SAMN03004340	GCA_000769115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/115/GCA_000769115.1_ASM76911v1	25858832	COT-108 OH2762
Klebsiella pneumoniae	573	PRJNA319426	319426	Proteobacteria	Gammaproteobacteria	6.06389	56.7789	chromosome:NZ_CP015392.1/CP015392.1; plasmid CR14_p1:NZ_CP015393.1/CP015393.1; plasmid CR14_p2:NZ_CP015394.1/CP015394.1; plasmid CR14_p3:NZ_CP015395.1/CP015395.1; plasmid CR14_p4:NZ_CP015396.1/CP015396.1; plasmid CR14_p5:NZ_CP015397.1/CP015397.1	-	6	6193	5869	1/17/17	2/22/17	Complete Genome	New York Medical College	SAMN04889857	GCA_001952915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/915/GCA_001952915.1_ASM195291v1	-	CR14
Helicobacter trogontum	50960	PRJNA261711	261711	Proteobacteria	delta/epsilon subdivisions	2.54883	33.2	-	JRPK01	657	2342	1967	10/10/14	4/9/17	Contig	Massachusetts Institute of Technology	SAMN03075570	GCA_000765885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/885/GCA_000765885.1_ASM76588v1	-	ATCC 49310
Helicobacter typhlonius	76936	PRJNA261711	261711	Proteobacteria	delta/epsilon subdivisions	1.90105	38.9	-	JRPF01	25	1941	1704	10/10/14	4/9/17	Scaffold	Massachusetts Institute of Technology	SAMN03075565	GCA_000765765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/765/GCA_000765765.1_ASM76576v1	25428971	MIT 98-6810
Intestinimonas butyriciproducens	1297617	PRJNA341691	341691	Terrabacteria group	Firmicutes	3.20086	59.3	-	MJII01	3	3173	3016	1/9/17	4/16/17	Contig	USDA-ARS	SAMN05726918	GCA_001940005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/005/GCA_001940005.1_ASM194000v1	27613689	27-5-10
Thalassobacter stenotrophicus	266809	PRJNA241419	241419	Proteobacteria	Alphaproteobacteria	3.41189	58.6	-	JGVS01	28	3298	3210	10/9/14	4/9/17	Contig	Univesitat de les Illes Balears (UIB)	SAMN02689779	GCA_000765015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/015/GCA_000765015.1_1CONIMAR09_01	25744993	1CONIMAR09
Jejuia pallidilutea	504487	PRJDB1686	251711	FCB group	Bacteroidetes/Chlorobi group	3.77081	33.8	-	BBNS01	87	3485	2632	10/2/14	4/9/17	Contig	The University of Tokyo	SAMD00017332	GCA_000764795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/795/GCA_000764795.1_ASM76479v1	25477402	JCM 19302
Algibacter lectus	221126	PRJDB1684	251709	FCB group	Bacteroidetes/Chlorobi group	4.69232	33.3	-	BBNQ01	56	4049	3317	10/2/14	4/9/17	Contig	The University of Tokyo	SAMD00017330	GCA_000764755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/755/GCA_000764755.1_ASM76475v1	25395640	JCM 19300
Sphingomonas taxi	1549858	PRJNA272576	272576	Proteobacteria	Alphaproteobacteria	3.94458	67.2	-	JXTP01	113	3692	3133	2/20/15	4/10/17	Contig	Hasselt University	SAMN03283903	GCA_000878375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/375/GCA_000878375.1_ASM87837v1	25977415	30a
Cellulophaga sp. Hel_I_12	1249972	PRJNA251768	251768	FCB group	Bacteroidetes/Chlorobi group	4.03113	35.3	-	JUHB01	1	3520	3435	12/9/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02841239	GCA_000799565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/565/GCA_000799565.1_ASM79956v1	-	Hel_I_12
Actinopolyspora erythraea	414996	PRJNA255193	255193	Terrabacteria group	Actinobacteria	5.3599	68.7	-	JPMV01	37	4753	4536	10/3/14	4/17/17	Scaffold	Zhejiang University	SAMN02911260	GCA_000763095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/095/GCA_000763095.1_ASM76309v1	25250723	YIM 90600
Thalassotalea sp. PP2-459	1742724	PRJNA344391	344391	Proteobacteria	Gammaproteobacteria	4.08	38.3	-	MKQD01	85	3621	3522	12/21/16	4/16/17	Scaffold	University of Santiago de Compostela	SAMN05821920	GCA_001913705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/705/GCA_001913705.1_ASM191370v1	-	PP2-459
Mycobacterium rufum JCM 16372	1305629	PRJDB962	245275	Terrabacteria group	Actinobacteria	3.81463	67.2	-	BBGS01	2815	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016942	GCA_001313925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/925/GCA_001313925.1_ASM131392v1	-	JCM 16372
Lysinimicrobium mangrovi	1043493	PRJEB16781	350923	Terrabacteria group	Actinobacteria	2.9732	71.8	-	FNZI01	15	2769	2695	10/29/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421637	GCA_900109245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/245/GCA_900109245.1_IMG-taxon_2687453759_annotated_assembly	-	DSM 24868
Modestobacter sp. DSM 44400	1550230	PRJEB16613	349955	Terrabacteria group	Actinobacteria	5.01601	72.6	-	FNOZ01	182	5103	4544	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05661080	GCA_900107175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/175/GCA_900107175.1_IMG-taxon_2599185197_annotated_assembly	-	DSM 44400
Paracoccus halophilus	376733	PRJEB17105	351343	Proteobacteria	Alphaproteobacteria	4.00871	65.2	-	FOJO01	79	3936	3642	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487972	GCA_900111785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/785/GCA_900111785.1_IMG-taxon_2617270913_annotated_assembly	-	CGMCC 1.6117
Streptomyces glaucescens	1907	PRJNA293375	293375	Terrabacteria group	Actinobacteria	8.42699	72	-	MUND01	1135	7929	6830	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06282461	GCA_002154375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/375/GCA_002154375.1_ASM215437v1	-	NRRL B-2706
Caloranaerobacter azorensis DSM 13643	1121264	PRJEB18251	355515	Terrabacteria group	Firmicutes	2.46193	29.7	-	FQXO01	156	2499	2343	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745135	GCA_900129995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/995/GCA_900129995.1_IMG-taxon_2585428077_annotated_assembly	-	DSM 13643
Mycobacterium kyorinense	487514	PRJNA305922	305922	Terrabacteria group	Actinobacteria	4.83097	66	-	LZKJ01	202	4620	4325	6/17/16	4/13/17	Contig	JCVI	SAMN04634245	GCA_001672775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/775/GCA_001672775.1_ASM167277v1	-	E861
Bacillus niacini	86668	PRJDB1658	258601	Terrabacteria group	Firmicutes	6.37225	37.8	-	BAWM01	170	6070	5758	8/14/14	4/9/17	Scaffold	Kinki University	SAMD00000021	GCA_000759675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/675/GCA_000759675.1_ASM75967v1	25278530	F8
Paenibacillus borealis	160799	PRJNA343020	343020	Terrabacteria group	Firmicutes	7.68447	49.1	-	MPTB01	192	6801	6577	1/18/17	4/17/17	Contig	Cornell University	SAMN05772541	GCA_001954415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/415/GCA_001954415.1_ASM195441v1	-	FSL H7-0744
Pseudomonas lutea	243924	PRJEB16962	351068	Proteobacteria	Gammaproteobacteria	5.4216	55.3	-	FOEV01	53	5074	4899	10/29/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216409	GCA_900110795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/795/GCA_900110795.1_IMG-taxon_2663762783_annotated_assembly	-	LMG 21974
Halomonas salina	42565	PRJNA248988	248988	Proteobacteria	Gammaproteobacteria	3.35844	68	-	JOKD01	86	3213	3074	9/25/14	4/9/17	Contig	CSIR- Institute of Genomics and Integrative Biology	SAMN02808312	GCA_000758175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/175/GCA_000758175.1_ASM75817v1	25573926	CIFRI 1
Flavobacterium aquatile	245	PRJNA354433	354433	FCB group	Bacteroidetes/Chlorobi group	3.48881	32.2	-	MUGQ01	19	3196	3130	7/12/17	7/14/17	Scaffold	FDA	SAMN06049046	GCA_002217235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/235/GCA_002217235.1_ASM221723v1	-	ATCC 11947
Legionella massiliensis	1034943	PRJEB4274	218496	Proteobacteria	Gammaproteobacteria	4.38701	41.2	-	CCSB01	8	3746	3590	9/5/14	4/9/17	Contig	URMITE	SAMEA2610544	GCA_000756695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/695/GCA_000756695.1_PRJEB110_assembly_1	-	-
Vibrio variabilis	990271	PRJDB1676	251703	Proteobacteria	Gammaproteobacteria	5.79753	45.9	-	BBMS01	208	7999	7941	9/12/14	10/17/14	Contig	The University of Tokyo	SAMD00017311	GCA_000755405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/405/GCA_000755405.1_ASM75540v1	-	JCM 19239
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	7.19506	44	-	MKQM01	143	6448	6261	1/18/17	4/6/17	Contig	Cornell University	SAMN05772515	GCA_001954285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/285/GCA_001954285.1_ASM195428v1	-	FSL R5-0883
Lactobacillus paraplantarum	60520	PRJNA253765	253765	Terrabacteria group	Firmicutes	3.11972	43.9	-	JPEB01	40	2997	2832	9/25/14	4/9/17	Scaffold	China Agricultural University	SAMN02893814	GCA_000758145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/145/GCA_000758145.1_ASM75814v1	-	L-ZS9
Vibrio maritimus	990268	PRJDB1677	251704	Proteobacteria	Gammaproteobacteria	5.57011	46.1	-	BBMT01	45	5282	3601	9/12/14	4/9/17	Contig	The University of Tokyo	SAMD00017312	GCA_000755425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/425/GCA_000755425.1_ASM75542v1	-	JCM 19240
Photobacterium aphoticum	754436	PRJDB1674	251701	Proteobacteria	Gammaproteobacteria	5.4123	49.7	-	BBMN01	56	7039	6976	9/11/14	11/22/14	Contig	The University of Tokyo	SAMD00017309	GCA_000755345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/345/GCA_000755345.1_ASM75534v1	25359913	JCM 19237
Nonlabens sediminis	319236	PRJDB1699	260429	FCB group	Bacteroidetes/Chlorobi group	2.93576	35.3	-	BBML01	22	2720	2436	9/5/14	4/17/17	Contig	The University of Tokyo	SAMD00017324	GCA_000755305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/305/GCA_000755305.1_ASM75530v1	25395639	JCM 19294
Achromobacter sp. Root565	1736564	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	6.06551	65.6	-	LMGO01	11	5531	5382	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155833	GCA_001427425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/425/GCA_001427425.1_Root565	26633631	Root565
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA281780	281780	Proteobacteria	Gammaproteobacteria	5.64883	56.7773	chromosome:NZ_CP011313.1/CP011313.1; plasmid pKpn2312-5:NZ_CP011315.1/CP011315.1; plasmid pKpn23412-362:NZ_CP011314.1/CP011314.1; plasmid pKpn23412-4:NZ_CP011316.1/CP011316.1	-	4	5667	5358	4/29/15	2/21/17	Complete Genome	Leibniz Institute DSMZ	SAMN03496739	GCA_000981845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/845/GCA_000981845.1_ASM98184v1	26159529	234-12
Vibrio ponticus	265668	PRJDB1675	251702	Proteobacteria	Gammaproteobacteria	4.65812	45.2	-	BBMI01	98	5730	5654	9/5/14	11/22/14	Contig	The University of Tokyo	SAMD00017310	GCA_000754155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/155/GCA_000754155.1_ASM75415v1	25359913	JCM 19238
Acidihalobacter prosperus	160660	PRJNA344938	344938	Proteobacteria	Gammaproteobacteria	3.52612	61.8788	chromosome:NZ_CP017448.1/CP017448.1; plasmid pAPV6:NZ_CP017449.1/CP017449.1	-	2	3367	3259	10/6/16	4/13/17	Chromosome	Curtin University	SAMN05853496	GCA_001753165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/165/GCA_001753165.1_ASM175316v1	-	V6
Streptomyces leeuwenhoekii	1437453	PRJNA231986	231986	Terrabacteria group	Actinobacteria	7.85486	72.6	-	AZSD01	602	7023	6309	5/30/14	3/9/17	Scaffold	"Institute of Biology, Leiden University"	SAMN02808814	GCA_000696595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/595/GCA_000696595.1_StrepLeeu1.0	24604690	C34(2013)
bacterium OL-1	1504822	PRJEB6476	251850	unclassified Bacteria	unclassified Bacteria (miscellaneous)	2.45358	62.7	-	CCFH01	16	2202	2091	9/6/14	4/9/17	Contig	URMITE	SAMEA2602738	GCA_000753055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/055/GCA_000753055.1_Cuture_of_bacteria_from_human_gut	-	-
Pectobacterium betavasculorum	55207	PRJNA258505	258505	Proteobacteria	Gammaproteobacteria	4.67573	51	-	JQHL01	115	4267	4028	9/8/14	4/9/17	Contig	Food and Environment Research Agency	SAMN02999424	GCA_000749925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/925/GCA_000749925.1_ASM74992v1	-	NCPPB 2793
bacterium MS4	1120746	PRJEB6469	251836	unclassified Bacteria	unclassified Bacteria (miscellaneous)	3.73772	51.3	-	CCNL01	17	3603	3493	8/22/14	4/9/17	Contig	URMITE	SAMEA2697680	GCA_000753235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/235/GCA_000753235.1_Amazonia_massiliensis	-	-
Thermoactinomyces sp. CDF	414750	PRJNA285030	285030	Terrabacteria group	Firmicutes	2.45383	48.1	-	LFJU01	20	2534	2445	7/27/15	4/17/17	Contig	Wuhan University	SAMN03736786	GCA_001187615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/615/GCA_001187615.1_ASM118761v1	-	CDF
Bacillus thermoamylovorans	35841	PRJNA270599	270599	Terrabacteria group	Firmicutes	3.84415	37.2	-	JXLS01	153	3779	3516	2/4/15	4/10/17	Scaffold	University of Groningen	SAMN03267283	GCA_000832165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/165/GCA_000832165.1_ASM83216v1	25814599	B4065
Chlamydia sp. 32-24	1895742	PRJNA279279	279279	PVC group	Chlamydiae	2.52996	32.4	-	MKSG01	98	2206	2075	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660523	GCA_001897185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/185/GCA_001897185.1_ASM189718v1	-	-
Klebsiella pneumoniae	573	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	5.88478	56.7699	chromosome:NZ_CP020067.1/CP020067.1; plasmid unitig_1:NZ_CP020068.1/CP020068.1; plasmid unitig_2:NZ_CP020069.1/CP020069.1; plasmid unitig_4:NZ_CP020070.1/CP020070.1	-	4	5913	5617	3/21/17	3/23/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014909	GCA_002055855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/855/GCA_002055855.1_ASM205585v1	-	AR_0068
Sulfuricurvum sp. PC08-66	1539066	PRJNA259227	259227	Proteobacteria	delta/epsilon subdivisions	2.294	46.9	-	JQIT01	20	2096	2054	1/29/15	1/29/15	Scaffold	Penn State	SAMN03002796	GCA_000830255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/255/GCA_000830255.1_ASM83025v1	25620962	-
Paenibacillus macerans	44252	PRJNA343020	343020	Terrabacteria group	Firmicutes	8.37808	50.2	-	MRTR01	2195	8913	8597	1/18/17	1/18/17	Contig	Cornell University	SAMN05929623	GCA_001956835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/835/GCA_001956835.1_ASM195683v1	-	FSL R5-0527
Ruminococcus bicirculans	1160721	PRJNA321218	321218	Terrabacteria group	Firmicutes	2.49455	42.9	-	MNTN01	35	2269	2188	12/23/16	12/23/16	Scaffold	None	SAMN05717297	GCA_001917015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/015/GCA_001917015.1_ASM191701v1	27819664	-
Ferrimicrobium acidiphilum DSM 19497	1121877	PRJNA273882	273882	Terrabacteria group	Actinobacteria	3.08865	55.3	-	JXUW01	68	2929	2768	3/6/15	4/10/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03299411	GCA_000949255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/255/GCA_000949255.1_FAP1	25931604	T23
Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933	398512	PRJNA221003	221003	Terrabacteria group	Firmicutes	6.63082	35.5	-	JQKC01	123	5544	5260	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02745943	GCA_000745845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/845/GCA_000745845.1_ASM74584v1	-	DSM 2933
Geobacillus subterraneus PSS2	1382357	PRJNA214283	214283	Terrabacteria group	Firmicutes	3.74674	51.6	-	JQMN01	2	3750	3387	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02744825	GCA_000744755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/755/GCA_000744755.1_ASM74475v1	-	PSS2
Streptomyces atratus	1893	PRJEB17962	353830	Terrabacteria group	Actinobacteria	8.51069	70.5	-	FPJO01	103	7742	7016	11/17/16	3/14/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02787144	GCA_900119365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/365/GCA_900119365.1_IMG-taxon_2616644941_annotated_assembly	-	OK807
Carnobacterium inhibens subsp. inhibens DSM 13024	1449339	PRJNA234895	234895	Terrabacteria group	Firmicutes	2.74861	34.9	-	JQIV01	6	2696	2542	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02787092	GCA_000746825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/825/GCA_000746825.1_ASM74682v1	-	K1
Salegentibacter sp. Hel_I_6	1250278	PRJNA248520	248520	FCB group	Bacteroidetes/Chlorobi group	4.21216	36.5	-	JQNQ01	1	3722	3609	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02799644	GCA_000745315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/315/GCA_000745315.1_ASM74531v1	-	Hel_I_6
Muricauda sp. CP2A	1848189	PRJNA244670	244670	FCB group	Bacteroidetes/Chlorobi group	4.27042	42.9	-	LXTT01	173	3911	3777	7/12/16	4/13/17	Contig	US Naval Research laboratory	SAMN04932972	GCA_001683915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/915/GCA_001683915.1_ASM168391v1	-	CP2A
Luteibacter sp. 9145	1500892	PRJNA247910	247910	Proteobacteria	Gammaproteobacteria	4.55959	64.9	-	JQND01	1	4081	3972	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02786990	GCA_000745055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/055/GCA_000745055.1_ASM74505v1	-	9145
Streptacidiphilus albus	105425	PRJDB3297	266938	Terrabacteria group	Actinobacteria	9.67777	71.8	-	BBPL01	155	8558	8073	11/21/14	4/10/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00022872	GCA_000787755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/755/GCA_000787755.1_ASM78775v1	25573937	NBRC 100918
Zobellia uliginosa	143224	PRJEB18821	360792	FCB group	Bacteroidetes/Chlorobi group	5.30316	42.6	-	FTOB01	27	4401	4312	1/14/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421766	GCA_900156625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/625/GCA_900156625.1_IMG-taxon_2681813510_annotated_assembly	-	DSM 2061
Rhizobium alamii	492774	PRJNA247578	247578	Proteobacteria	Alphaproteobacteria	7.39566	60.2	-	JUHR01	36	7135	6948	12/9/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02787066	GCA_000799895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/895/GCA_000799895.1_ASM79989v1	-	YR584
Cronobacter sakazakii	28141	PRJNA291037	291037	Proteobacteria	Gammaproteobacteria	4.61057	56.7655	chromosome:NZ_CP012253.1/CP012253.1; plasmid pCS1:NZ_CP012254.1/CP012254.1; plasmid pCS2:NZ_CP012255.1/CP012255.1; plasmid pCS3:NZ_CP012256.1/CP012256.1	-	4	4469	4257	9/1/15	4/4/17	Complete Genome	Nestle Institute of Health Sciences	SAMN03938714	GCA_001277275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/275/GCA_001277275.1_ASM127727v1	27013041	NCTC 8155
Carnobacterium divergens DSM 20623	1449336	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.59063	35	-	JQBS01	35	2445	2383	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02797805	GCA_001437085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/085/GCA_001437085.1_ASM143708v1	26415554	DSM 20623
Carnobacterium alterfunditum	28230	PRJEB18420	355818	Terrabacteria group	Firmicutes	2.54884	36.1	-	FSRN01	5	2390	2239	12/14/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05878443	GCA_900143105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/105/GCA_900143105.1_IMG-taxon_2698536812_annotated_assembly	-	313
Bifidobacterium saguini DSM 23967	1437607	PRJNA237576	237576	Terrabacteria group	Actinobacteria	2.77343	56.3	-	JDUT01	46	2326	2204	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442037	GCA_000771625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/625/GCA_000771625.1_DSM-23967	25658111	DSM 23967
Bifidobacterium psychraerophilum DSM 22366	1435464	PRJNA237576	237576	Terrabacteria group	Actinobacteria	2.62112	58.7	-	JDUQ01	70	2179	2083	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442034	GCA_000771565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/565/GCA_000771565.1_DSM-22366	25658111	DSM 22366
Bifidobacterium reuteri DSM 23975	1437610	PRJNA237576	237576	Terrabacteria group	Actinobacteria	2.836	60.5	-	JDUW01	60	2220	2079	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442040	GCA_000771685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/685/GCA_000771685.1_DSM-23975	25658111	DSM 23975
Acetobacter malorum	178901	PRJNA288385	288385	Proteobacteria	Alphaproteobacteria	3.83348	56.7	-	LHZC01	57	3454	3299	3/7/16	4/12/17	Contig	Ghent University	SAMN03799273	GCA_001580615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/615/GCA_001580615.1_ASM158061v1	-	LMG 1746
Ruegeria halocynthiae	985054	PRJEB16555	349837	Proteobacteria	Alphaproteobacteria	4.24367	56.5	-	FNNP01	35	4192	4072	10/22/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444358	GCA_900106805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/805/GCA_900106805.1_IMG-taxon_2693429872_annotated_assembly	-	DSM 27839
Bifidobacterium merycicum DSM 6492	1410646	PRJNA237576	237576	Terrabacteria group	Actinobacteria	2.27843	60.3	-	JDTL01	45	1886	1734	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442042	GCA_000770945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/945/GCA_000770945.1_DSM-6492	25658111	DSM 6492
Bifidobacterium cuniculi DSM 20435	1437601	PRJNA237576	237576	Terrabacteria group	Actinobacteria	2.51269	64.9	-	JDUL01	264	2232	2069	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442028	GCA_000771465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/465/GCA_000771465.1_DSM-20435	25658111	DSM 20435
Bifidobacterium bohemicum DSM 22767	1437606	PRJNA237576	237576	Terrabacteria group	Actinobacteria	2.0549	57.4	-	JDUS01	52	1627	1522	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442036	GCA_000771605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/605/GCA_000771605.1_DSM-22767	25658111	DSM 22767
Bifidobacterium saeculare DSM 6531 = LMG 14934	1437611	PRJNA237576	237576	Terrabacteria group	Actinobacteria	2.25126	63.8	-	JDTM01	67	1848	1741	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442043	GCA_000770965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/965/GCA_000770965.1_DSM-6531	25658111	DSM 6531
Bifidobacterium scardovii	158787	PRJNA239864	239864	Terrabacteria group	Actinobacteria	3.14179	64.6	-	JGZO01	34	2568	2375	8/18/14	4/9/17	Contig	University of Parma	SAMN02673452	GCA_000741405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/405/GCA_000741405.1_Bifsca	"2,508,549,325,107,960"	LMG 21589
Bifidobacterium pullorum DSM 20433	1437600	PRJNA237576	237576	Terrabacteria group	Actinobacteria	2.10095	64.3	-	JDUI01	38	1710	1613	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442026	GCA_000771405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/405/GCA_000771405.1_DSM-20433	25658111	DSM 20433
Bifidobacterium mongoliense DSM 21395	1437603	PRJNA237576	237576	Terrabacteria group	Actinobacteria	2.15405	62.8	-	JDUO01	55	1789	1686	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442032	GCA_000771525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/525/GCA_000771525.1_DSM-21395	25658111	DSM 21395
Bifidobacterium gallinarum DSM 20670	1437602	PRJNA237576	237576	Terrabacteria group	Actinobacteria	2.12857	64.2	-	JDUN01	103	1776	1648	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442031	GCA_000771505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/505/GCA_000771505.1_DSM-20670	25658111	DSM 20670
Bifidobacterium callitrichos DSM 23973	1437609	PRJNA237576	237576	Terrabacteria group	Actinobacteria	2.86721	63.6	-	JDUV01	106	2374	2243	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442039	GCA_000771665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/665/GCA_000771665.1_DSM-23973	25658111	DSM 23973
Bifidobacterium biavatii DSM 23969	1437608	PRJNA237576	237576	Terrabacteria group	Actinobacteria	3.26268	63.2	-	JDUU01	107	2591	2433	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442038	GCA_000771645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/645/GCA_000771645.1_DSM-23969	25658111	DSM 23969
Bifidobacterium actinocoloniiforme DSM 22766	1437605	PRJNA239834	239834	Terrabacteria group	Actinobacteria	1.82339	62.7	-	JGYK01	4	1515	1417	8/18/14	4/9/17	Contig	University of Parma	SAMN02673422	GCA_000741095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/095/GCA_000741095.1_Bifact	"2,508,549,325,107,960"	DSM 22766
Haematobacter missouriensis	366616	PRJNA302795	302795	Proteobacteria	Alphaproteobacteria	4.33794	64.2	-	NIPV01	129	4209	3950	6/16/17	6/21/17	Contig	CDC	SAMN04279596	GCA_002196895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/895/GCA_002196895.1_ASM219689v1	-	H1892
Haematobacter massiliensis	195105	PRJNA302795	302795	Proteobacteria	Alphaproteobacteria	3.90029	64.5	-	NIPU01	85	3766	3636	6/16/17	6/21/17	Contig	CDC	SAMN04279595	GCA_002196885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/885/GCA_002196885.1_ASM219688v1	-	H0445
Lactobacillus oryzae JCM 18671	1291743	PRJDB781	243693	Terrabacteria group	Firmicutes	1.84017	42.8	-	BBAZ01	91	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000461	GCA_001311525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/525/GCA_001311525.1_ASM131152v1	-	JCM 18671
Cronobacter sakazakii ATCC BAA-894	290339	PRJNA12720	12720	Proteobacteria	Gammaproteobacteria	4.53078	56.7642	chromosome:NC_009778.1/CP000783.1; plasmid pESA2:NC_009779.1/CP000784.1; plasmid pESA3:NC_009780.1/CP000785.1	-	3	4375	4174	8/28/07	3/30/17	Complete Genome	The Enterobacter sakazakii Genome Sequencing Project	SAMN02603913	GCA_000017665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/665/GCA_000017665.1_ASM1766v1	20221447	ATCC BAA-894
Serratia nematodiphila DZ0503SBS1	1449981	PRJNA257492	257492	Proteobacteria	Gammaproteobacteria	5.22492	59.5	-	JPUX01	2	4954	4753	8/7/14	4/9/17	Contig	Kyungpook National University	SAMN02952129	GCA_000738675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/675/GCA_000738675.1_ASM73867v1	25444874	DSM 21420
Bifidobacterium coryneforme	1687	PRJNA257132	257132	Terrabacteria group	Actinobacteria	1.74971	60.5	-	JXBX01	6	1410	1342	3/31/15	4/10/17	Scaffold	Uppsala university	SAMN03271958	GCA_000967205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/205/GCA_000967205.1_ASM96720v1	-	Bma6
Cryobacterium sp. MLB-32	1529318	PRJNA257128	257128	Terrabacteria group	Actinobacteria	4.36716	64.9	-	JPRS01	800	4107	3592	8/6/14	4/9/17	Contig	Agharkar Research Institute	SAMN02947788	GCA_000738085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/085/GCA_000738085.1_CryRoo1.0	-	MLB-32
Bifidobacterium bombi DSM 19703	1341695	PRJNA237576	237576	Terrabacteria group	Actinobacteria	1.91279	56	-	JDTS01	54	1506	1418	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442010	GCA_000771085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/085/GCA_000771085.1_DSM-19703	25658111	DSM 19703
Klebsiella pneumoniae	573	PRJNA376414	376414	Proteobacteria	Gammaproteobacteria	6.10613	56.7365	chromosome:NZ_CP020847.1/CP020847.1; plasmid pKPN1481-1:NZ_CP020848.1/CP020848.1; plasmid pKPN1481-2:NZ_CP020851.1/CP020851.1; plasmid pKPN1481-3:NZ_CP020852.1/CP020852.1; plasmid pKPN1481-4:NZ_CP020850.1/CP020850.1; plasmid pKPN1481-5:NZ_CP020849.1/CP020849.1	-	6	6162	5720	5/23/17	5/25/17	Complete Genome	Houston Methodist Hospital	SAMN06438458	GCA_002156765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/765/GCA_002156765.1_ASM215676v1	-	KPN1481
Flavobacterium reichenbachii	362418	PRJNA354433	354433	FCB group	Bacteroidetes/Chlorobi group	5.57797	33.6	-	MUHF01	49	4848	4724	7/12/17	7/14/17	Scaffold	FDA	SAMN06049053	GCA_002217435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/435/GCA_002217435.1_ASM221743v1	-	DSM 21791
Flavobacterium hydatis	991	PRJNA354433	354433	FCB group	Bacteroidetes/Chlorobi group	5.90257	32.7	-	MUGY01	72	5018	4882	7/12/17	7/14/17	Scaffold	FDA	SAMN06049047	GCA_002217335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/335/GCA_002217335.1_ASM221733v1	-	ATCC 29551
Chryseobacterium formosense	236814	PRJEB17560	352013	FCB group	Bacteroidetes/Chlorobi group	4.43261	34.8	-	FPAP01	14	4043	3937	11/2/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421857	GCA_900116415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/415/GCA_900116415.1_IMG-taxon_2684622901_annotated_assembly	-	DSM 17452
Staphylococcus agnetis	985762	PRJNA171575	171575	Terrabacteria group	Firmicutes	2.416	35.8	-	JPRT01	45	2413	2267	8/1/14	4/9/17	Contig	University of Missouri - Columbia	SAMN02948411	GCA_000737185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/185/GCA_000737185.1_ASM73718v1	25189590	CBMRN20813338
Chryseobacterium halperniae	421072	PRJEB16957	351082	FCB group	Bacteroidetes/Chlorobi group	4.08903	37.8	-	FOFI01	14	3807	3717	10/29/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488097	GCA_900110605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/605/GCA_900110605.1_IMG-taxon_2622736498_annotated_assembly	-	DSM 19921
Cellulosimicrobium sp. MM	1523621	PRJNA255748	255748	Terrabacteria group	Actinobacteria	3.84686	74.4	-	JPQW01	299	3700	2556	7/31/14	4/9/17	Contig	University of Delhi	SAMN02941831	GCA_000736715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/715/GCA_000736715.1_ASM73671v1	25301656	MM
Arenibacter algicola	616991	PRJNA225843	225843	FCB group	Bacteroidetes/Chlorobi group	5.55023	39.7	-	JPOO01	3	4635	4504	7/24/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02744759	GCA_000733925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/925/GCA_000733925.1_ASM73392v1	-	TG409
Desulfobacula sp. GWF2_41_7	1797910	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	3.23223	44.8	-	MGTK01	316	3187	2325	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314218	GCA_001799405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/405/GCA_001799405.1_ASM179940v1	27774985	-
Nonlabens ulvanivorans	906888	PRJDB1691	259616	FCB group	Bacteroidetes/Chlorobi group	3.25274	35.1	-	BBLG01	42	3065	2374	8/26/14	4/9/17	Contig	The University of Tokyo	SAMD00017326	GCA_000747685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/685/GCA_000747685.1_ASM74768v1	25395639	JCM 19296
Halobacillus karajensis	195088	PRJEB5509	244988	Terrabacteria group	Firmicutes	4.03603	41.6	-	CCDI01	12	3993	3800	5/15/14	4/10/17	Scaffold	URMITE	SAMEA3139065	GCA_000731155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/155/GCA_000731155.1_PRJEB5509_assembly_1	-	HD-03
Caballeronia sordidicola	196367	PRJNA248610	248610	Proteobacteria	Betaproteobacteria	10.2619	59.6	-	JNFG01	216	9107	8782	7/16/14	4/9/17	Contig	Institute of Microbiology of the Academy of Sciences of the Czech Republic	SAMN02799706	GCA_000729995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/995/GCA_000729995.1_ASM72999v1	25125648	S170
Vibrio metoecus	1481663	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.96318	46.8	-	LBGR01	64	3740	3538	10/22/15	4/4/17	Scaffold	University of Alberta	SAMN03488027	GCA_001402515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/515/GCA_001402515.1_ASM140251v1	26454015	YB9D03
Klebsiella pneumoniae	573	PRJNA376414	376414	Proteobacteria	Gammaproteobacteria	5.97307	56.714	chromosome:NZ_CP020853.1/CP020853.1; plasmid pKPN528-1:NZ_CP020854.1/CP020854.1; plasmid pKPN528-2:NZ_CP020855.1/CP020855.1; plasmid pKPN528-3:NZ_CP020856.1/CP020856.1	-	4	6026	5550	5/23/17	5/25/17	Complete Genome	Houston Methodist Hospital	SAMN06437491	GCA_002156785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/785/GCA_002156785.1_ASM215678v1	-	KPN528
Chryseobacterium antarcticum	266748	PRJEB16850	351031	FCB group	Bacteroidetes/Chlorobi group	3.13071	36.1	-	FOIX01	6	2879	2816	10/29/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421765	GCA_900109615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/615/GCA_900109615.1_IMG-taxon_2687453776_annotated_assembly	-	DSM 17047
Streptomyces aureus	193461	PRJNA293375	293375	Terrabacteria group	Actinobacteria	7.92666	71.8	-	LIPQ01	707	7377	6518	10/28/15	3/12/17	Scaffold	USDA/ARS/NCAUR	SAMN04002963	GCA_001418135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/135/GCA_001418135.1_ASM141813v1	-	NRRL B-2808
Streptomyces xanthophaeus	67385	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.62193	72.2	-	JOFT01	163	7823	7457	7/15/14	3/11/17	Scaffold	University of Illinois	SAMN02645271	GCA_000725805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/805/GCA_000725805.1_Doro.v1.0	-	NRRL B-5414
Dermacoccus nishinomiyaensis	1274	PRJNA355843	355843	Terrabacteria group	Actinobacteria	3.08811	69.1	-	MQVT01	58	2879	2726	12/19/16	4/16/17	Contig	Forsyth Institute	SAMN06093559	GCA_001908935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/935/GCA_001908935.1_ASM190893v1	-	UCD-KPL2534
Shinella sp. SUS2	1692241	PRJNA291349	291349	Proteobacteria	Alphaproteobacteria	7.00577	63.7	-	LGYG01	109	6763	6530	8/6/15	4/11/17	Scaffold	University of Exeter	SAMN03943231	GCA_001262505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/505/GCA_001262505.1_SUS2x1	26769927	SUS2
Clostridium haemolyticum NCTC 8350	1443115	PRJNA233469	233469	Terrabacteria group	Firmicutes	2.46561	27.8	-	JDSA01	234	2407	2195	10/24/14	4/9/17	Contig	National Veterinary Institute (SVA)	SAMN02593757	GCA_000768575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/575/GCA_000768575.1_NCTC8350_1.0	-	NCTC 8350
Chlorobium sp. GBChlB	1519464	PRJNA254072	254072	FCB group	Bacteroidetes/Chlorobi group	3.05965	50.9	-	JPGV01	51	2249	2181	7/8/14	9/25/14	Contig	International Geobiology Course	SAMN02899251	GCA_000724175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/175/GCA_000724175.1_ASM72417v1	25212621	-
Halobacillus dabanensis	240302	PRJEB17404	351604	Terrabacteria group	Firmicutes	4.13734	41.7	-	FOSB01	24	4119	3942	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487936	GCA_900114165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/165/GCA_900114165.1_IMG-taxon_2617270759_annotated_assembly	-	CGMCC 1.3704
Bacillus vietnamensis	218284	PRJEB5512	245003	Terrabacteria group	Firmicutes	4.47852	43.9	-	CCDN01	12	4562	4452	5/15/14	4/10/17	Contig	URMITE	SAMEA3139053	GCA_000723905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/905/GCA_000723905.1_PRJEB5512_assembly_1	-	HD-02
Saccharibacter sp. M18	1970095	PRJNA350232	350232	Proteobacteria	Alphaproteobacteria	2.07505	59.4	-	MNPS01	11	1930	1845	5/19/17	5/24/17	Contig	NARIC	SAMN05935506	GCA_002150105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/105/GCA_002150105.1_ASM215010v1	-	M18
Hydrogenophaga intermedia NBRC 102510	1349790	PRJDB1375	231431	Proteobacteria	Betaproteobacteria	5.11277	68.5	-	BCTI01	149	4922	4781	2/18/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046728	GCA_001571205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/205/GCA_001571205.1_ASM157120v1	-	NBRC 102510
Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628	1349767	PRJDB1351	231408	Proteobacteria	Betaproteobacteria	5.88392	61.1	-	BCTH01	196	5089	4912	2/18/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046731	GCA_001571185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/185/GCA_001571185.1_ASM157118v1	-	NBRC 102515
Pedobacter antarcticus	34086	PRJEB16180	348950	FCB group	Bacteroidetes/Chlorobi group	4.42218	40.4	-	FNGZ01	25	3926	3813	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488084	GCA_900103515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/515/GCA_900103515.1_IMG-taxon_2622736436_annotated_assembly	-	DSM 11725
Streptomyces durhamensis	68194	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.85429	69.6	-	JOAS01	451	-	-	7/1/14	7/3/14	Scaffold	University of Illinois	SAMN02645373	GCA_000722375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/375/GCA_000722375.1_ASM72237v1	-	NRRL ISP-5539
Microtetraspora glauca	1996	PRJDB4051	309148	Terrabacteria group	Actinobacteria	9.27575	70.1	-	BBYL01	62	8407	8036	1/16/16	4/12/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00035249	GCA_001570385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/385/GCA_001570385.1_ASM157038v1	-	NBRC 14761
Micromonospora purpureochromogenes	47872	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.22405	72.8	-	JOEU01	180	6488	6248	7/2/14	4/17/17	Contig	University of Illinois	SAMN02645246	GCA_000721115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/115/GCA_000721115.1_ASM72111v1	-	NRRL B-2672
Allokutzneria albata	211114	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.51683	70.3	-	JOEF01	155	7876	7571	7/2/14	4/9/17	Contig	University of Illinois	SAMN02645229	GCA_000720955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/955/GCA_000720955.1_ASM72095v1	-	NRRL B-24461
Streptomyces aureocirculatus	67275	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.32114	71.2	-	JOAP01	223	8148	7525	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645370	GCA_000720475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/475/GCA_000720475.1_ASM72047v1	-	NRRL ISP-5386
Streptomyces bicolor	66874	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.48188	70.5	-	JOFS01	183	8523	7971	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645270	GCA_000719285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/285/GCA_000719285.1_ASM71928v1	-	NRRL B-5348
Streptomyces albidoflavus	1886	PRJNA340356	340356	Terrabacteria group	Actinobacteria	6.95208	73.4	-	MNPQ01	50	6086	5866	11/3/16	3/14/17	Scaffold	Hunan University	SAMN05712738	GCA_001865795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/795/GCA_001865795.1_ASM186579v1	-	OsiLf-2
Lechevalieria aerocolonigenes	68170	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.2507	68.5	-	JYJG01	649	9534	9054	3/18/15	4/10/17	Contig	University of Illinois	SAMN03323308	GCA_000955955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/955/955/GCA_000955955.1_ASM95595v1	-	NRRL B-16140
Lentzea albidocapillata	40571	PRJEB20341	382095	Terrabacteria group	Actinobacteria	8.63949	68.7	-	FWYC01	37	8201	7953	4/8/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660733	GCA_900176525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/525/GCA_900176525.1_IMG-taxon_2595698253_annotated_assembly	-	DSM 44073
Streptomyces sclerotialus	1957	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.22991	71.9	-	JOBC01	112	7225	6816	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645383	GCA_000720555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/555/GCA_000720555.1_ASM72055v1	-	NRRL ISP-5269
Herbidospora cretacea	28444	PRJDB3871	309964	Terrabacteria group	Actinobacteria	8.28209	70.7	-	BBXG01	36	7458	7188	1/26/16	4/12/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00029379	GCA_001570605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/605/GCA_001570605.1_ASM157060v1	26452464	NBRC 15474
Streptomyces ruber	83378	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.59409	72.2	-	JODN01	432	8197	7759	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645211	GCA_000719015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/015/GCA_000719015.1_ASM71901v1	-	NRRL B-1661
Kineosporia aurantiaca JCM 3230	1306174	PRJDB984	245285	Terrabacteria group	Actinobacteria	4.28799	66.9	-	BBHM01	3931	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017024	GCA_001315325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/325/GCA_001315325.1_ASM131532v1	-	JCM 3230
Streptomyces puniceus	67351	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.17588	72.5	-	JOFA01	82	7189	6849	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645252	GCA_000719195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/195/GCA_000719195.1_ASM71919v1	-	NRRL B-2895
Streptomyces varsoviensis	67373	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.59509	72.4	-	JOFN01	155	7288	6925	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645265	GCA_000719255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/255/GCA_000719255.1_ASM71925v1	-	NRRL B-3589
Micromonospora chokoriensis	356851	PRJNA238534	238534	Terrabacteria group	Actinobacteria	6.96544	70.7	-	JOAN01	62	6269	6087	7/2/14	4/17/17	Contig	University of Illinois	SAMN02645368	GCA_000718555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/555/GCA_000718555.1_ASM71855v1	-	NRRL B-24750
Microbispora rosea subsp. nonnitritogenes	1464078	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.66127	71.3	-	JNZQ01	199	7935	7621	7/2/14	4/9/17	Contig	University of Illinois	SAMN02645345	GCA_000718475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/475/GCA_000718475.1_ASM71847v1	-	NRRL B-2631
Streptomyces griseofuscus	146922	PRJNA362244	362244	Terrabacteria group	Actinobacteria	8.57757	71.6	-	MTKC01	3	7563	7133	4/28/17	5/3/17	Scaffold	Korea Research Institute of Bioscience & Biotechnology	SAMN06236792	GCA_002114065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/065/GCA_002114065.1_ASM211406v1	-	NG1-7
Mycetocola saprophilus	76636	PRJNA238534	238534	Terrabacteria group	Actinobacteria	3.45341	66.1	-	JOEB01	27	3201	3108	7/2/14	4/9/17	Contig	University of Illinois	SAMN02645225	GCA_000718075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/075/GCA_000718075.1_ASM71807v1	-	-
Kitasatospora purpeofusca	67352	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.43	67.5	-	JOBB01	3450	-	-	7/1/14	7/3/14	Scaffold	University of Illinois	SAMN02645382	GCA_000716225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/225/GCA_000716225.1_ASM71622v1	-	NRRL ISP-5283
Streptomyces purpeochromogenes	1464077	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.99682	72.6	-	JOBG01	107	7023	6682	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645387	GCA_000718615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/615/GCA_000718615.1_ASM71861v1	-	NRRL ISP-5373
Kibdelosporangium aridum subsp. largum	145996	PRJNA238534	238534	Terrabacteria group	Actinobacteria	12.9936	66.1	-	JNYM01	2227	-	-	7/1/14	7/1/14	Contig	University of Illinois	SAMN02645313	GCA_000717205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/205/GCA_000717205.1_ASM71720v1	-	NRRL B-24462
Streptomyces katrae	68223	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.5829	71.8	-	JNZY01	151	7793	7296	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645353	GCA_000717655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/655/GCA_000717655.1_ASM71765v1	-	NRRL B-16271
Streptomyces vinaceus	1960	PRJNA293375	293375	Terrabacteria group	Actinobacteria	7.03413	71.7	-	MUAZ01	867	6624	5855	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06277068	GCA_002154465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/465/GCA_002154465.1_ASM215446v1	-	NRRL B-1733
Catenuloplanes japonicus JCM 9106	1307447	PRJDB996	245295	Terrabacteria group	Actinobacteria	4.92246	68.2	-	BBHW01	4417	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017033	GCA_001315525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/525/GCA_001315525.1_ASM131552v1	-	JCM 9106
Streptomyces capuensis	1464056	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.43988	71.9	-	JOFM01	318	8341	7879	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645264	GCA_000718295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/295/GCA_000718295.1_ASM71829v1	-	NRRL B-3501
Streptomyces virginiae	1961	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.18506	71.7	-	JNYC01	181	8471	8017	7/1/14	3/11/17	Contig	University of Illinois	SAMN02645303	GCA_000716685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/685/GCA_000716685.1_ASM71668v1	-	NRRL B-8091
Streptomyces anulatus	1892	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.40269	71.3	-	JNXS01	178	7727	7109	7/1/14	3/9/17	Contig	University of Illinois	SAMN02645293	GCA_000717105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/105/GCA_000717105.1_ASM71710v1	-	NRRL B-3362
Kitasatospora aureofaciens	1894	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.28528	72.8	-	JNWR01	505	8124	7538	7/1/14	8/21/17	Contig	University of Illinois	SAMN02645196	GCA_000716885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/885/GCA_000716885.1_ASM71688v1	-	NRRL B-1286
Streptomyces olivaceus	47716	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.39765	71.1	-	JNWM01	65	6569	6300	7/1/14	3/9/17	Contig	University of Illinois	SAMN02645191	GCA_000716815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/815/GCA_000716815.1_ASM71681v1	-	NRRL B-1125
Streptomyces alboflavus	67267	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.71738	72.2	-	JNXT01	171	8296	7903	7/1/14	3/9/17	Contig	University of Illinois	SAMN02645294	GCA_000716675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/675/GCA_000716675.1_ASM71667v1	-	NRRL B-2373
Dactylosporangium aurantiacum	35754	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.3225	72	-	JNZX01	7137	-	-	7/1/14	7/1/14	Scaffold	University of Illinois	SAMN02645352	GCA_000716055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/055/GCA_000716055.1_ASM71605v1	-	NRRL B-8111
Saccharothrix sp. ST-888	1427391	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.87503	71.9	-	JYJF01	1195	6622	6099	3/18/15	4/10/17	Contig	University of Illinois	SAMN03323300	GCA_000955975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/955/975/GCA_000955975.1_ASM95597v1	-	ST-888
Kitasatospora phosalacinea	2065	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.61695	74.1	-	JNYE01	340	7594	7159	7/1/14	4/9/17	Contig	University of Illinois	SAMN02645305	GCA_000717185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/185/GCA_000717185.1_ASM71718v1	-	NRRL B-16228
Streptomyces bikiniensis	1896	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.39101	73.1	-	JNXJ01	155	6704	6268	7/1/14	3/9/17	Contig	University of Illinois	SAMN02645284	GCA_000716625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/625/GCA_000716625.1_ASM71662v1	-	NRRL ISP-5580
Streptomyces resistomycificus	67356	PRJNA299235	299235	Terrabacteria group	Actinobacteria	9.17974	71	-	LMWZ01	35	8239	7837	1/13/16	3/12/17	Scaffold	Bielefeld University	SAMN04193356	GCA_001514265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/265/GCA_001514265.1_ASM151426v1	-	DSM 40133
Streptomyces pyridomyceticus	68260	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.80361	70.9	-	JNZN01	201	-	-	7/1/14	5/13/16	Scaffold	University of Illinois	SAMN02645342	GCA_000716015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/015/GCA_000716015.1_ASM71601v1	-	NRRL B-2517
Streptomyces flaveus	66370	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.60038	69	-	JNZB01	82	-	-	7/1/14	7/1/14	Scaffold	University of Illinois	SAMN02645329	GCA_000715945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/945/GCA_000715945.1_ASM71594v1	-	NRRL B-1652
Streptomyces decoyicus	249567	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.02957	68.8	-	JNYG01	231	-	-	7/1/14	5/13/16	Scaffold	University of Illinois	SAMN02645307	GCA_000715775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/775/GCA_000715775.1_ASM71577v1	-	NRRL ISP-5087
Thioclava dalianensis	1185766	PRJEB17124	351324	Proteobacteria	Alphaproteobacteria	4.19759	62.5	-	FOVB01	42	4174	4021	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216224	GCA_900115035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/035/GCA_900115035.1_IMG-taxon_2663762756_annotated_assembly	-	CGMCC 1.12325
Shewanella xiamenensis	332186	PRJNA277867	277867	Proteobacteria	Gammaproteobacteria	5.17039	46.2	-	JZWJ01	212	4728	4415	3/29/17	4/6/17	Contig	Laboratoire de sante publique du Quebec	SAMN03397547	GCA_002074855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/855/GCA_002074855.1_ASM207485v1	27505638	T17
Bacillus indicus LMG 22858	1458122	PRJNA237198	237198	Terrabacteria group	Firmicutes	4.12913	44.4	-	JGVU02	22	4194	4087	6/16/14	4/9/17	Contig	GCAT-SEEK	SAMN02617681	GCA_000708755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/755/GCA_000708755.2_ASM70875v2	"1,528,031,625,142,210"	LMG 22858
Streptomyces californicus	67281	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.78334	72.7	-	JOFG01	64	6805	6508	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645258	GCA_000718245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/245/GCA_000718245.1_ASM71824v1	-	NRRL B-2988
Klebsiella pneumoniae subsp. pneumoniae KPNIH27	1328324	PRJNA198783	198783	Proteobacteria	Gammaproteobacteria	6.13244	56.7058	chromosome:NZ_CP007731.1/CP007731.1; plasmid pKEC-dc3:NZ_CP007732.1/CP007732.1; plasmid pKPN-068:NZ_CP007733.1/CP007733.1; plasmid pKPN-262:NZ_CP007734.1/CP007734.1; plasmid pKPN-a41:NZ_CP007735.1/CP007735.1; plasmid pKPN-b0b:NZ_CP007736.1/CP007736.1	-	6	6318	5932	5/27/14	2/21/17	Complete Genome	NISC	SAMN02713685	GCA_000695935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/935/GCA_000695935.1_ASM69593v1	-	KPNIH27
Weissella hellenica	46256	PRJEB15015	336305	Terrabacteria group	Firmicutes	1.81649	37	-	FMAW01	31	1814	1653	8/3/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487795	GCA_900095015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/015/GCA_900095015.1_IMG-taxon_2615840610_annotated_assembly	-	R-53116
Bacillus gaemokensis	574375	PRJNA313130	313130	Terrabacteria group	Firmicutes	5.61625	35.6	-	LTAQ01	70	5754	5212	3/14/16	4/12/17	Scaffold	KRIBB	SAMN04515759	GCA_001590835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/590/835/GCA_001590835.1_ASM159083v1	27174273	KCTC 13318
Chromobacterium haemolyticum	394935	PRJNA253350	253350	Proteobacteria	Betaproteobacteria	5.0834	62.8	-	JRFR01	72	4611	4431	9/26/14	4/9/17	Contig	"School of Pharmacy, Kitasato University"	SAMN02870191	GCA_000758475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/475/GCA_000758475.1_ASM75847v1	25377696	T124
Synergistes jonesii	2754	PRJNA258244	258244	Synergistetes	Synergistia	2.63641	56.4	-	JPZS01	69	2522	2428	10/11/16	4/13/17	Contig	CSIRO	SAMN02991089	GCA_001757415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/415/GCA_001757415.1_ASM175741v1	-	113-4
Microbulbifer sp. ZGT114	1685377	PRJNA307149	307149	Proteobacteria	Gammaproteobacteria	3.64302	59.9	-	LQBR01	30	3191	3089	1/8/16	4/11/17	Contig	"Red Sea Research Center, Saudi Arabia"	SAMN04376035	GCA_001507605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/605/GCA_001507605.1_ASM150760v1	-	ZGT114
Bifidobacterium indicum LMG 11587 = DSM 20214	1341694	PRJNA237576	237576	Terrabacteria group	Actinobacteria	1.72396	60.5	-	JDUE01	30	1407	1332	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442022	GCA_000771325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/325/GCA_000771325.1_DSM-20214	25658111	DSM 20214
Carnobacterium jeotgali	545534	PRJNA237991	237991	Terrabacteria group	Firmicutes	2.34961	35.2	-	JEMH01	107	2303	2042	6/16/14	4/9/17	Contig	Kyung Hee University	SAMN02640260	GCA_000708655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/655/GCA_000708655.1_MS3	-	MS3
[Clostridium] aminophilum	1526	PRJEB15744	347673	Terrabacteria group	Firmicutes	3.19848	50.7	-	FOIL01	108	2794	2626	10/29/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487771	GCA_900101295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/295/GCA_900101295.1_IMG-taxon_2606217764_annotated_assembly	-	KH1P1
Kitasatospora sp. Root187	1736486	PRJNA297942	297942	Terrabacteria group	Actinobacteria	7.49424	71.4	-	LMHX01	52	6756	6347	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155755	GCA_001429805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/805/GCA_001429805.1_Root187	26633631	Root187
Aeromonas jandaei	650	PRJNA270278	270278	Proteobacteria	Gammaproteobacteria	4.67694	61.7	-	JWJR01	114	4314	4122	1/2/15	4/10/17	Contig	University of Malaya	SAMN03265386	GCA_000813485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/485/GCA_000813485.1_ASM81348v1	-	L14h
Salinivibrio socompensis S10B	868280	PRJNA194041	194041	Proteobacteria	Gammaproteobacteria	3.35202	49.5	-	AQOE01	252	3292	2303	1/7/14	4/9/17	Contig	Universidade Federal do Rio de Janeiro	SAMN02597456	GCA_000565325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/325/GCA_000565325.1_saliniS10B	-	S10B
Persephonella sp. KM09-Lau-8	1158345	PRJNA237259	237259	Aquificae	Aquificae	2.07483	34.4	-	JNLL01	2	2239	2160	6/11/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02841209	GCA_000703085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/085/GCA_000703085.1_ASM70308v1	-	KM09_Lau8
Alcaligenes faecalis	511	PRJNA312705	312705	Proteobacteria	Betaproteobacteria	4.04751	56.7	chromosome:NZ_CP021079.1/CP021079.1	-	1	3736	3610	5/1/17	5/22/17	Complete Genome	Qingdao Agriculture University	SAMN04505616	GCA_001641975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/975/GCA_001641975.2_ASM164197v2	-	P156
Mitsuokella jalaludinii	187979	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.39516	58.2	-	CYYU01	46	2202	2063	10/1/15	4/11/17	Contig	SC	SAMEA3545236	GCA_001404615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/615/GCA_001404615.1_13414_6_12	-	2789STDY5608828
Exiguobacterium oxidotolerans JCM 12280	1397699	PRJNA218048	218048	Terrabacteria group	Firmicutes	3.0894	47	-	JNIS01	3	3109	2954	6/11/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02841151	GCA_000702625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/625/GCA_000702625.1_ASM70262v1	25323723	JCM 12280
Exiguobacterium aurantiacum	33987	PRJNA345439	345439	Terrabacteria group	Firmicutes	2.88054	52.2	-	MKXO01	55	2955	2855	10/14/16	4/13/17	Contig	Universidad Arturo Prat	SAMN05863719	GCA_001766415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/415/GCA_001766415.1_ASM176641v1	-	PN47
Alicyclobacillus macrosporangiidus	392015	PRJEB17602	351965	Terrabacteria group	Firmicutes	3.78942	63.2	-	FPBV01	95	3742	3562	11/2/16	4/14/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421543	GCA_900116805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/805/GCA_900116805.1_IMG-taxon_2675903231_annotated_assembly	-	DSM 17980
Sphingorhabdus sp. M41	1806885	PRJNA306719	306719	Proteobacteria	Alphaproteobacteria	3.33952	56.7	chromosome:NZ_CP014545.1/CP014545.1	-	1	3184	3116	3/10/16	4/12/17	Complete Genome	Chung-Ang University	SAMN04361746	GCA_001586275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/275/GCA_001586275.1_ASM158627v1	-	M41
Sharpea azabuensis	322505	PRJEB16818	350989	Terrabacteria group	Firmicutes	2.40155	37.3	-	FNYK01	140	2520	2291	10/29/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487834	GCA_900108995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/995/GCA_900108995.1_IMG-taxon_2606217806_annotated_assembly	-	DSM 20406
Succinivibrio dextrinosolvens H5	1410676	PRJNA223462	223462	Proteobacteria	Gammaproteobacteria	2.67547	39	-	JNKL01	106	2392	2244	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841189	GCA_000702045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/045/GCA_000702045.1_ASM70204v1	-	H5
Paraoerskovia marina	545619	PRJEB16383	349313	Terrabacteria group	Actinobacteria	2.98694	70.7	chromosome I:NZ_LT629776.1/LT629776.1	-	1	2714	2604	10/21/16	4/13/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489860	GCA_900105445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/445/GCA_900105445.1_IMG-taxon_2634166844_annotated_assembly	-	DSM 22126
Deinococcus marmoris	249408	PRJNA353333	353333	Terrabacteria group	Deinococcus-Thermus	5.28683	64.1	-	MSTI01	187	5214	4878	1/12/17	4/16/17	Contig	Pukyong National University	SAMN06013988	GCA_001949125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/125/GCA_001949125.1_ASM194912v1	-	PAMC 26562
Proteiniclasticum ruminis	398199	PRJEB15955	348233	Terrabacteria group	Firmicutes	3.11938	43.1	-	FNDZ01	25	2935	2822	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421804	GCA_900099635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/635/GCA_900099635.1_IMG-taxon_2675903137_annotated_assembly	-	CGMCC 1.5058
Streptomyces fradiae	1906	PRJNA290327	290327	Terrabacteria group	Actinobacteria	7.6671	72.8	-	LGSP01	208	6556	6084	7/31/15	3/11/17	Contig	Vavilov Institute of General Genetics	SAMN03890301	GCA_001190165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/190/165/GCA_001190165.1_ASM119016v1	26494685	olg1-1
Peptoclostridium litorale DSM 5388	1121324	PRJEB18279	355712	Terrabacteria group	Firmicutes	3.19762	41.2	-	FSRH01	38	2943	2838	12/14/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745945	GCA_900141635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/635/GCA_900141635.1_IMG-taxon_2585428090_annotated_assembly	-	DSM 5388
Aeromonas taiwanensis	633417	PRJEB7041	267812	Proteobacteria	Gammaproteobacteria	4.25089	62.8	-	CDDD01	106	3958	3751	11/24/14	4/10/17	Scaffold	UCONNMISEQ	SAMEA2752407	GCA_000820165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/165/GCA_000820165.1_PRJEB7041	-	LMG 24683
Caballeronia zhejiangensis	871203	PRJNA264584	264584	Proteobacteria	Betaproteobacteria	7.66684	62.8	-	JSBM01	154	7180	6898	11/7/14	4/9/17	Contig	Centro de Investigacion en Biotecnologia - Universidad Autonoma del Estado de Morelos	SAMN03135817	GCA_000773055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/055/GCA_000773055.1_BzhMx1.0	25523778	CEIB S4-3
Pseudomonas simiae	321846	PRJNA261851	261851	Proteobacteria	Gammaproteobacteria	6.39566	60.3	-	JRMC01	20	5893	5721	11/17/14	4/10/17	Scaffold	Agriculture and Agri-Food Canada	SAMN03078485	GCA_000785125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/125/GCA_000785125.1_ASM78512v1	25657286	Feb-36
Peptoclostridium sp. UBA4398	1947069	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.89765	30.4	-	DGRC01	35	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452113	GCA_002390935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/935/GCA_002390935.1_ASM239093v1	28894102	-
Geomicrobium sp. JCM 19038	1460635	PRJDB1613	245973	Terrabacteria group	Firmicutes	3.87262	41.8	-	BAXA01	37	4186	3532	5/21/14	4/9/17	Contig	"Microbe Division/JCM, RIKEN BioResource Center"	SAMD00000375	GCA_000698125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/125/GCA_000698125.1_ASM69812v1	24948772	JCM 19038
Halomonas campaniensis	213554	PRJNA257355	257355	Proteobacteria	Gammaproteobacteria	4.80966	55.1	-	JPUA01	51	4468	4278	6/29/17	7/1/17	Scaffold	Pondicherry University	SAMN02950934	GCA_002211105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/105/GCA_002211105.1_ASM221110v1	-	SK03
Oribacterium parvum ACB8	796945	PRJNA78569	78569	Terrabacteria group	Firmicutes	2.48191	42	-	AJZT01	15	2214	2127	7/10/12	4/7/17	Contig	J. Craig Venter Institute	SAMN00828777	GCA_000277505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/505/GCA_000277505.1_OspACB8v1.0	-	ACB8
Aeropyrum camini SY1 = JCM 12091	1198449	PRJDB107	221786	TACK group	Crenarchaeota	1.59599	56.7	chromosome:AP012489.1	-	1	1695	1645	9/28/13	10/7/16	Complete Genome	"Laboratory of Marine Microbiology, Division of Applied Biosciences, Graduate School of Agriculture, Kyoto University"	SAMD00061006	GCA_000591035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/035/GCA_000591035.1_ASM59103v1	-	SY1
Hydrogenovibrio marinus	28885	PRJNA245483	245483	Proteobacteria	Gammaproteobacteria	2.61806	44.1	-	JMIU01	5	2484	2364	5/29/14	4/9/17	Scaffold	Pohang University of Science and Technology	SAMN02738237	GCA_000696325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/325/GCA_000696325.1_HydMar1.0	-	MH-110
Chloroflexus sp. Y-400-fl	480224	PRJNA21119	21119	Terrabacteria group	Chloroflexi	5.26895	56.7	chromosome:NC_012032.1/CP001364.1	-	1	4319	4056	2/4/09	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598448	GCA_000022185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/185/GCA_000022185.1_ASM2218v1	-	Y-400-fl
Chloroflexus aurantiacus J-10-fl	324602	PRJNA59	59	Terrabacteria group	Chloroflexi	5.25854	56.7	chromosome:NC_010175.1/CP000909.1	-	1	3990	3853	12/20/07	8/3/16	Complete Genome	US DOE Joint Genome Institute	SAMN02598539	GCA_000018865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/865/GCA_000018865.1_ASM1886v1	-	J-10-fl
Gemmatimonas sp. SG8_28	1703357	PRJNA270657	270657	FCB group	Gemmatimonadetes	3.85651	67.2	-	LJNQ01	430	3601	3081	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994167	GCA_001303165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/165/GCA_001303165.1_ASM130316v1	25922666	-
Mycobacterium triplex	47839	PRJNA299467	299467	Terrabacteria group	Actinobacteria	6.36629	66.6	-	LQPY01	48	6007	5834	4/20/17	4/22/17	Contig	University of Trento	SAMN04216955	GCA_002102415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/415/GCA_002102415.1_ASM210241v1	-	DSM 44626
Bifidobacterium ruminantium	78346	PRJNA239861	239861	Terrabacteria group	Actinobacteria	2.24981	59.2	-	JGZL01	23	1911	1735	8/18/14	4/9/17	Contig	University of Parma	SAMN02673449	GCA_000741365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/365/GCA_000741365.1_Bifrum	"2,508,549,325,107,960"	LMG 21811
Mycoplasma hyosynoviae	29559	PRJNA238371	238371	Terrabacteria group	Tenericutes	0.888107	26.9	-	JFKL01	49	707	652	5/15/14	4/2/17	Contig	"Newport Laboratories, A Sanofi Company"	SAMN02673664	GCA_000691265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/265/GCA_000691265.1_MhyoNPL1v1.0_of_Mycoplasma_hyosynoviae_strain_NPL1_genome	24903877	NPL1
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA360094	360094	Proteobacteria	Gammaproteobacteria	5.91867	56.6853	chromosome:NZ_CP019047.1/CP019047.1; plasmid pRJA166a:NZ_CP019048.1/CP019048.1; plasmid pRJA166b:NZ_CP019049.1/CP019049.1; plasmid pRJA166c:NZ_CP019050.1/CP019050.1	-	4	5931	5641	6/2/17	6/5/17	Complete Genome	Shanghai Ruijin Hospital Affiliated with Jiaotong University	SAMN06200334	GCA_002163895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/895/GCA_002163895.1_ASM216389v1	-	RJA166
Lonsdalea quercina subsp. quercina	1082705	PRJNA242888	242888	Proteobacteria	Gammaproteobacteria	3.84837	55.6	-	JIBP01	35	3420	3242	5/9/14	4/9/17	Contig	Colorado State University	SAMN02712572	GCA_000688675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/675/GCA_000688675.1_LonsB83	24926062	NCCB 100489
Bifidobacterium boum DSM 20432	1410645	PRJNA237576	237576	Terrabacteria group	Actinobacteria	2.17144	59.3	-	JDUH01	37	1749	1642	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442025	GCA_000771385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/385/GCA_000771385.1_DSM-20432	25658111	DSM 20432
Aeromonas enteropelogenes	29489	PRJNA277406	277406	Proteobacteria	Gammaproteobacteria	4.67835	62	-	LDWG01	49	4318	4142	6/24/15	4/10/17	Contig	University of Malaya	SAMN03744441	GCA_001038825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/825/GCA_001038825.1_ASM103882v1	-	LK14
Sphingobacterium thalpophilum	259	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.23173	44.2	-	DFTX01	461	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455424	GCA_002381505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/505/GCA_002381505.1_ASM238150v1	28894102	-
Lactobacillus kunkeei	148814	PRJNA270967	270967	Terrabacteria group	Firmicutes	1.60826	36.8	-	JXCU01	8	1463	1385	9/11/15	4/4/17	Scaffold	Uppsala university	SAMN03275711	GCA_001281165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/165/GCA_001281165.1_ASM128116v1	25953738	Fhon2
Robinsoniella sp. RHS	1504536	PRJNA251536	251536	Terrabacteria group	Firmicutes	7.23759	41.2	-	JNGB01	276	6154	6154	6/17/15	6/17/15	Contig	Center for Genome Sciences and Systems Biology	SAMN02800742	GCA_001029355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/355/GCA_001029355.1_ASM102935v1	25284151	-
Mycoplasma pirum MPI25960	1430898	PRJNA230016	230016	Terrabacteria group	Tenericutes	0.850704	24.3	-	AZHZ01	9	724	662	4/23/14	4/9/17	Scaffold	Southeast University	SAMN02768700	GCA_000686245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/245/GCA_000686245.1_mycoplasma_pirum	-	MPI25960
Candidatus Methanoperedens nitroreducens	1392998	PRJNA242803	242803	Euryarchaeota	Methanomicrobia	3.20339	43.2	-	JMIY01	10	3360	3254	5/6/14	4/9/17	Scaffold	University of Queensland	SAMN02713514	GCA_000685155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/155/GCA_000685155.1_ANME2D_V10	23892779	ANME-2d
Peptococcaceae bacterium SCADC1_2_3	1487582	PRJNA243645	243645	Terrabacteria group	Firmicutes	1.85806	43.1	-	JPED01	202	1696	1603	8/17/14	8/17/14	Contig	Hydrocarbon Metagenomic Project	SAMN02887169	GCA_000740805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/805/GCA_000740805.1_ASM74080v1	-	-
Actibacterium sp. UBA681	1945960	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.70858	59.7	-	DBND01	140	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457070	GCA_002298325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/325/GCA_002298325.1_ASM229832v1	28894102	-
Pseudomonas moraviensis R28-S	1395516	PRJNA217803	217803	Proteobacteria	Gammaproteobacteria	6.30832	59.7624	chromosome:NZ_CM002330.1/CM002330.1; plasmid pR28:NZ_CM002331.1/CM002331.1	AYMZ01	2	5775	5593	12/12/13	4/10/17	Chromosome	University of Idaho	SAMN02471806	GCA_000512275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/275/GCA_000512275.1_ASM51227v1	24558233	R28-S
Paenibacillus darwinianus	1380763	PRJNA238415	238415	Terrabacteria group	Firmicutes	3.03846	56.7	-	JFHU01	108	3013	2685	3/19/14	4/9/17	Scaffold	University of Auckland	SAMN02644517	GCA_000598085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/085/GCA_000598085.1_CE1draft	25285990	CE1
Candidatus Protochlamydia sp. W-9	1785087	PRJDB4526	358503	PVC group	Chlamydiae	2.48457	34.5	-	BCPZ01	402	1991	1815	12/21/16	3/22/17	Contig	Hokkaido University	SAMD00046153	GCA_001950615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/615/GCA_001950615.1_ASM195061v1	27978822	W-9
Sporolactobacillus terrae HKM-1	1449983	PRJNA235254	235254	Terrabacteria group	Firmicutes	3.28656	45.2	-	JAQS01	89	3219	3095	4/23/14	4/9/17	Contig	Shanghai Jiao Tong University	SAMN02951932	GCA_000647835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/835/GCA_000647835.1_HKM-1_v1	-	HKM-1
Neochlamydia sp. TUME1	1478174	PRJNA242497	242497	PVC group	Chlamydiae	2.54632	38	-	JRXI01	254	2092	1879	1/2/15	3/29/17	Contig	University of Vienna	SAMN02700579	GCA_000813645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/645/GCA_000813645.1_TUME1_v1	25069652	TUME1
Sodalis-like symbiont of Philaenus spumarius	1189304	PRJNA342845	342845	Proteobacteria	Gammaproteobacteria	2.23801	53.4	-	NKXM01	780	2576	1954	8/21/17	8/21/17	Contig	Cornell University	SAMN07260765	GCA_002261105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/105/GCA_002261105.1_ASM226110v1	-	spu
Sulfitobacter pontiacus 3SOLIMAR09	1406866	PRJNA222424	222424	Proteobacteria	Alphaproteobacteria	3.45317	60.4	-	AXZR01	25	3330	3249	4/23/14	4/9/17	Contig	Microbiology. Departament of Biology. University of Balearic Islands	SAMN02732283	GCA_000647675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/675/GCA_000647675.1_SulPonPM01v1	24855294	3SOLIMAR09
Ehrlichia sp. Wisconsin_h	1423420	PRJNA242629	242629	Proteobacteria	Alphaproteobacteria	1.05627	29.7	-	JHOH01	11	851	799	5/17/17	5/24/17	Contig	Centers for DIsease Control and Prevention	SAMN02699958	GCA_002148345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/345/GCA_002148345.1_ASM214834v1	-	Wisconsin_h
Dyella jiangningensis	1379159	PRJEB16000	348207	Proteobacteria	Gammaproteobacteria	5.10626	65.8	-	FNFA01	41	4601	4455	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487785	GCA_900100425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/425/GCA_900100425.1_IMG-taxon_2623620556_annotated_assembly	-	SBZ3-12
Clostridium scatologenes	1548	PRJNA243991	243991	Terrabacteria group	Firmicutes	7.35383	30.3	-	JIDX01	174	-	-	4/17/14	5/20/14	Contig	Korean Advanced Institute of Science and Technology	SAMN02721231	GCA_000632785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/785/GCA_000632785.1_CloSca1.0	24831152	ATCC 25775
Pseudomonas otitidis	319939	PRJNA241481	241481	Proteobacteria	Gammaproteobacteria	6.29689	66.4	-	JGYF01	69	5995	5834	4/16/14	4/9/17	Scaffold	Liaoning University	SAMN02690695	GCA_000632755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/755/GCA_000632755.1_PseOti1.0	-	LNU-E-001
Acetobacter persici JCM 25330	1236503	PRJDB590	243165	Proteobacteria	Alphaproteobacteria	3.70195	57.2	-	BAJW01	236	3497	2476	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00012185	GCA_000613905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/905/GCA_000613905.1_ASM61390v1	-	JCM 25330
Lactobacillus apodemi DSM 16634 = JCM 16172	1423724	PRJDB651	243232	Terrabacteria group	Firmicutes	2.07329	38.6	-	BAMM01	63	2034	1716	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00011178	GCA_000615885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/885/GCA_000615885.1_ASM61588v1	-	JCM 16172
Pseudomonas bauzanensis	653930	PRJEB17476	351675	Proteobacteria	Gammaproteobacteria	3.54163	60.3	-	FOUA01	16	3301	3202	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487855	GCA_900114735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/735/GCA_900114735.1_IMG-taxon_2619618872_annotated_assembly	-	CGMCC 1.9095
Acetobacter okinawensis	1076594	PRJNA253128	253128	Proteobacteria	Alphaproteobacteria	2.72494	58.1	-	JOPJ01	147	2534	2420	5/19/17	5/24/17	Contig	Cornell University	SAMN02866238	GCA_002153655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/655/GCA_002153655.1_ASM215365v1	-	DsW_060
Novosphingobium resinovorum	158500	PRJNA239214	239214	Proteobacteria	Alphaproteobacteria	6.30449	65.1	-	JFYZ01	115	5802	5507	4/14/14	4/9/17	Contig	Monash University Malaysia	SAMN02676962	GCA_000632105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/105/GCA_000632105.1_NresiKF1_v1	-	KF1
Geobacillus thermocatenulatus GS-1	1444308	PRJNA233553	233553	Terrabacteria group	Firmicutes	3.5196	52.1	-	JFHZ01	155	3607	3359	4/2/14	4/9/17	Contig	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN02592613	GCA_000612265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/265/GCA_000612265.1_GeoThe1.0	-	GS-1
Lactobacillus paralimentarius DSM 19674	1423788	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.88292	35.3	-	AZDY01	42	2809	2701	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369437	GCA_001434855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/855/GCA_001434855.1_ASM143485v1	26415554	DSM 19674
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.09419	42.0644	chromosome I:NZ_LT860207.1/LT860207.1; plasmid II:NZ_LT860208.1/LT860208.1	-	2	973	905	6/2/17	6/12/17	Chromosome	Functional Genomics Genter Zurich	SAMEA103890753	GCA_900169045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/045/GCA_900169045.1_SWA-14	-	-
Draconibacterium orientale	1168034	PRJEB17030	351200	FCB group	Bacteroidetes/Chlorobi group	5.07314	41.3	-	FOHT01	89	4086	3994	10/29/16	4/18/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444285	GCA_900111425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/425/GCA_900111425.1_IMG-taxon_2693429902_annotated_assembly	-	DSM 25947
Lactobacillus fuchuensis DSM 14340 = JCM 11249	1423747	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.12225	41.8	-	AZEX01	76	2024	1972	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369428	GCA_001435065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/065/GCA_001435065.1_ASM143506v1	26415554	DSM 14340
Lactobacillus hamsteri DSM 5661 = JCM 6256	1423754	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.8378	35.1	-	AZGI01	93	1785	1691	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369398	GCA_001434515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/515/GCA_001434515.1_ASM143451v1	26415554	DSM 5661
Prevotella fusca JCM 17724	1236517	PRJDB605	243180	FCB group	Bacteroidetes/Chlorobi group	3.17382	44	-	BAKO01	116	2636	1983	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00011176	GCA_000614245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/245/GCA_000614245.1_ASM61424v1	-	JCM 17724
Bacteroides faecichinchillae	871325	PRJEB18171	355448	FCB group	Bacteroidetes/Chlorobi group	4.80652	38.7	-	FQVD01	88	4049	3786	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444349	GCA_900129065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/065/GCA_900129065.1_IMG-taxon_2695420934_annotated_assembly	-	DSM 26883
Prevotella enoeca JCM 12259	1235815	PRJDB563	243142	FCB group	Bacteroidetes/Chlorobi group	2.78402	46.5	-	BAIX01	117	2484	1949	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00011231	GCA_000613405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/405/GCA_000613405.1_ASM61340v1	-	JCM 12259
Lactobacillus sucicola DSM 21376 = JCM 15457	1423806	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.45951	38.5	-	AYZF01	18	2296	2208	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369475	GCA_001436705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/705/GCA_001436705.1_ASM143670v1	26415554	DSM 21376
Photobacterium phosphoreum	659	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.47568	39.6	-	JZSJ01	164	4055	3672	3/10/15	4/10/17	Contig	FDA/CFSAN	SAMN03295486	GCA_000949955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/955/GCA_000949955.1_CFSAN029438_01.0	-	ATCC 11040
Mycobacterium vulneris	547163	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.77827	66.9	-	MBDY01	97	6481	6315	7/15/16	4/13/17	Contig	JCVI	SAMN04634255	GCA_001686675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/675/GCA_001686675.1_ASM168667v1	-	ACS3670
Oceanobacillus picturae	171693	PRJDB3832	304588	Terrabacteria group	Firmicutes	3.90072	39	-	BBXV01	92	3952	3801	11/28/15	4/11/17	Contig	"NODAI Genome Research Center, Tokyo University of Agriculture"	SAMD00029049	GCA_001485235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/235/GCA_001485235.1_ASM148523v1	26847884	Heshi-B3
Sulfitobacter mediterraneus	83219	PRJNA238000	238000	Proteobacteria	Alphaproteobacteria	3.8617	58.4	-	JEMU01	55	3744	3665	4/23/14	4/9/17	Contig	Univesitat de les Illes Balears (UIB)	SAMN02641242	GCA_000647535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/535/GCA_000647535.1_1FIGIMAR09_01	24855294	1FIGIMAR09
Roseomonas mucosa	207340	PRJNA298945	298945	Proteobacteria	Alphaproteobacteria	4.74125	70.5	-	LLWF02	249	4339	4124	12/15/15	3/15/17	Contig	Griffith University	SAMN04169051	GCA_001466485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/485/GCA_001466485.2_ASM146648v2	-	AU37
Klebsiella pneumoniae	573	PRJNA329409	329409	Proteobacteria	Gammaproteobacteria	5.86916	56.6811	chromosome:NZ_CP017985.1/CP017985.1; plasmid unnamed1:NZ_CP017986.1/CP017986.1; plasmid unnamed2:NZ_CP017987.1/CP017987.1; plasmid unnamed3:NZ_CP017988.1/CP017988.1; plasmid unnamed4:NZ_CP017989.1/CP017989.1	-	5	5882	5604	1/19/17	2/22/17	Complete Genome	University Medical Center Goettingen	SAMN05412796	GCA_001956965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/965/GCA_001956965.1_ASM195696v1	-	825795-1
Paracoccus yeei ATCC BAA-599	1446473	PRJNA234040	234040	Proteobacteria	Alphaproteobacteria	4.42889	67.5	-	JHWH01	70	4282	4007	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02744027	GCA_000622145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/145/GCA_000622145.1_ASM62214v1	-	ATCC BAA-599
Legionella sainthelensi	28087	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	4.10813	37	-	LNYV01	37	3569	3360	12/15/15	4/11/17	Scaffold	Tel Aviv University	SAMN04274792	GCA_001468105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/105/GCA_001468105.1_ASM146810v1	26752266	Mt.St.Helens-4
Legionella cherrii DSM 19213	1122160	PRJNA222237	222237	Proteobacteria	Gammaproteobacteria	3.69676	38.9	-	JHYM01	13	3197	3101	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743988	GCA_000621385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/385/GCA_000621385.1_ASM62138v1	-	DSM 19213
Legionella geestiana DSM 21217	1122161	PRJNA221077	221077	Proteobacteria	Gammaproteobacteria	2.51793	51.1	-	JHYN01	54	2322	2213	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743989	GCA_000621365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/365/GCA_000621365.1_ASM62136v1	-	DSM 21217
Thiothrix lacustris	525917	PRJNA340050	340050	Proteobacteria	Gammaproteobacteria	10.5136	52	-	MTEJ01	809	10902	10086	4/10/17	4/10/17	Scaffold	University of Michigan	SAMN06213943	GCA_002083875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/875/GCA_002083875.1_ASM208387v1	-	-
Lactobacillus hayakitensis DSM 18933 = JCM 14209	1423755	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.68554	34	-	AZGD01	108	1656	1543	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369399	GCA_001434455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/455/GCA_001434455.1_ASM143445v1	26415554	DSM 18933
Halotalea alkalilenta DSM 17697	1403347	PRJNA221047	221047	Proteobacteria	Gammaproteobacteria	4.46583	64.7	-	JHYY01	40	4065	3915	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743977	GCA_000621205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/205/GCA_000621205.1_ASM62120v1	-	DSM 17697
Bacteroides sartorii JCM 17136 = DSM 21941	1236515	PRJDB603	243178	FCB group	Bacteroidetes/Chlorobi group	5.29037	43.8	-	BAKM01	160	-	-	4/1/14	9/16/15	Contig	The University of Tokyo	SAMD00010076	GCA_000614185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/185/GCA_000614185.1_ASM61418v1	-	JCM 17136
Prolixibacter bellariivorans JCM 13498	1236540	PRJDB628	243204	FCB group	Bacteroidetes/Chlorobi group	5.14393	44.2	-	BALJ01	92	4460	3996	4/1/14	4/18/17	Contig	The University of Tokyo	SAMD00006082	GCA_000614865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/865/GCA_000614865.1_ASM61486v1	-	JCM 13498
Mycoplasma gallinarum	29557	PRJNA247551	247551	Terrabacteria group	Tenericutes	0.797712	26.1	-	LVLH01	56	659	602	5/5/16	4/12/17	Contig	Pasteur Institute of Tunis	SAMN04578532	GCA_001637235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/235/GCA_001637235.1_ASM163723v1	27313300	Mgn_IPT
Lactobacillus kitasatonis DSM 16761 = JCM 1039	1423767	PRJDB640	243218	Terrabacteria group	Firmicutes	1.9025	37.5	-	BALU01	35	1929	1579	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00016339	GCA_000615285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/285/GCA_000615285.1_ASM61528v1	-	JCM 1039
Lactobacillus gallinarum DSM 10532 = JCM 2011	1423748	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.93719	36.5	-	AZEL01	86	1962	1737	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369396	GCA_001434975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/975/GCA_001434975.1_ASM143497v1	26415554	DSM 10532
Porphyromonas gingivicanis	266762	PRJNA253605	253605	FCB group	Bacteroidetes/Chlorobi group	1.98348	42.7	-	JQZW01	19	1676	1592	10/27/14	4/9/17	Contig	UC Davis	SAMN03004338	GCA_000769135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/135/GCA_000769135.1_ASM76913v1	25858832	COT-022 OH1391
Asaia platycodi SF2.1	1382230	PRJEB4016	251319	Proteobacteria	Alphaproteobacteria	3.42065	59.9	-	CBLX01	27	3092	2925	5/30/14	4/9/17	Scaffold	UNIMI	SAMEA3139059	GCA_000724025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/025/GCA_000724025.1_ASAP	"2,480,472,224,682,150"	SF2.1
Porphyromonas cangingivalis	36874	PRJNA253603	253603	FCB group	Bacteroidetes/Chlorobi group	2.36476	47.7	-	JQJF01	21	1962	1886	10/10/14	4/9/17	Scaffold	UC Davis	SAMN03004336	GCA_000766005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/766/005/GCA_000766005.1_ASM76600v1	25858832	COT-109 OH1379
Prevotella scopos JCM 17725	1236518	PRJDB606	243181	FCB group	Bacteroidetes/Chlorobi group	3.18443	40.7	-	BAKP01	113	2578	2052	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00009021	GCA_000614285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/285/GCA_000614285.1_ASM61428v1	-	JCM 17725
Bacteroides paurosaccharolyticus	732242	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.19966	34.9	-	DHEE01	120	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453589	GCA_002399725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/725/GCA_002399725.1_ASM239972v1	28894102	-
Bacteroides stercorirosoris	871324	PRJEB18311	355767	FCB group	Bacteroidetes/Chlorobi group	6.26818	44.6	-	FQZN01	91	4969	4768	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444350	GCA_900142015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/015/GCA_900142015.1_IMG-taxon_2700988705_annotated_assembly	-	DSM 26884
Flavobacterium succinicans	29536	PRJNA246164	246164	FCB group	Bacteroidetes/Chlorobi group	3.31452	35.2	-	JMTM01	74	2806	2729	6/13/16	4/12/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02746055	GCA_001662485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/485/GCA_001662485.1_ASM166248v1	-	DD5b
Bacteroides acidifaciens JCM 10556	1235814	PRJDB562	243141	FCB group	Bacteroidetes/Chlorobi group	4.84906	43	-	BAIW01	265	-	-	4/1/14	9/16/15	Contig	The University of Tokyo	SAMD00004211	GCA_000613385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/385/GCA_000613385.1_ASM61338v1	-	JCM 10556
Klebsiella pneumoniae	573	PRJNA376414	376414	Proteobacteria	Gammaproteobacteria	5.96528	56.6651	chromosome:NZ_CP020841.1/CP020841.1; plasmid pKPN1482-1:NZ_CP020842.1/CP020842.1; plasmid pKPN1482-2:NZ_CP020843.1/CP020843.1; plasmid pKPN1482-3:NZ_CP020844.1/CP020844.1; plasmid pKPN1482-4:NZ_CP020846.1/CP020846.1; plasmid pKPN1482-5:NZ_CP020845.1/CP020845.1	-	6	6151	5798	5/23/17	5/25/17	Complete Genome	Houston Methodist Hospital	SAMN06438459	GCA_002156745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/745/GCA_002156745.1_ASM215674v1	-	KPN1482
Lysinibacillus sp. BF-4	1473546	PRJNA240145	240145	Terrabacteria group	Firmicutes	2.63301	40.2	-	JPUW01	105	2671	2539	8/26/14	4/9/17	Contig	Bundeswehr Insitute of Microbiology	SAMN02673297	GCA_000743635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/635/GCA_000743635.1_ASM74363v1	25301643	BF-4
Acinetobacter bohemicus	1435036	PRJEB17536	351986	Proteobacteria	Gammaproteobacteria	3.72836	39.2	-	FOZU01	104	3618	3339	11/2/16	4/6/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444586	GCA_900116265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/265/GCA_900116265.1_IMG-taxon_2675903032_annotated_assembly	-	ANC 5076
Alkalibacterium sp. 20	1798803	PRJNA311284	311284	Terrabacteria group	Firmicutes	2.56039	38.9	-	LSRN01	110	2414	2279	11/23/16	4/14/17	Contig	University of Copenhagen	SAMN04481462	GCA_001885615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/615/GCA_001885615.1_ASM188561v1	-	20
Peptoniphilus grossensis	1465756	PRJNA341691	341691	Terrabacteria group	Firmicutes	2.14341	31.2	-	MJIH01	8	2059	1887	1/9/17	4/16/17	Contig	USDA-ARS	SAMN05726917	GCA_001940285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/285/GCA_001940285.1_ASM194028v1	27613689	35-6-1
Mesotoga infera	1236046	PRJNA278302	278302	Thermotogae	Thermotogae	1.22511	45.6	-	LGGH01	267	1371	1371	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445161	GCA_001508435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/435/GCA_001508435.1_ASM150843v1	26787827	-
Aeromicrobium massiliense JC14	1033730	PRJEA68301	68301	Terrabacteria group	Actinobacteria	6.75926	65.5	-	CAEF01	1274	-	-	10/2/11	10/2/11	Contig	laboratoire URMITE	SAMEA2272569	GCA_000285435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/435/GCA_000285435.1_ASM28543v1	-	-
Halorhodospira halochloris str. A	1354791	PRJNA210423	210423	Proteobacteria	Gammaproteobacteria	3.46013	63	chromosome:CP007268.1	-	1	3142	2984	3/3/14	7/31/14	Chromosome	Northeastern State University	SAMN02644663	GCA_000583815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/815/GCA_000583815.1_ASM58381v1	-	A
Alistipes timonensis JC136	1033731	PRJEA68303	68303	FCB group	Bacteroidetes/Chlorobi group	3.48961	58.8	-	CAEG01	38	2752	2655	3/2/12	4/8/17	Contig	laboratoire URMITE	SAMEA2272181	GCA_000285455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/455/GCA_000285455.1_ASM28545v1	-	P148
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.90164	34	chromosome:NZ_CM004509.1/CM004509.1	LZGG01	1	5104	4916	7/21/16	7/26/16	Chromosome	University of Texas at Austin	SAMN05179591	GCA_001693435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/435/GCA_001693435.1_ASM169343v1	-	wkB7
Candidatus Accumulibacter sp. SK-02	1453999	PRJNA236434	236434	Proteobacteria	Betaproteobacteria	4.35942	61.3	-	JDST02	155	3984	3953	3/3/14	7/28/14	Contig	Australian Centre for Ecogenomics	SAMN00778987	GCA_000584975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/975/GCA_000584975.2_capsk02	-	-
Lactobacillus composti DSM 18527 = JCM 14202	1423734	PRJNA222257	222257	Terrabacteria group	Firmicutes	3.4674	44	-	AZGA01	88	3337	3222	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369442	GCA_001436375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/375/GCA_001436375.1_ASM143637v1	26415554	DSM 18527
Robbsia andropogonis Ba3549	1423893	PRJNA228914	228914	Proteobacteria	Betaproteobacteria	6.17866	58.9	-	AYSW01	301	5421	5068	12/5/13	4/9/17	Contig	Colorado State University	SAMN02404464	GCA_000566705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/705/GCA_000566705.1_Ba3549	-	Ba3549
Lactobacillus farraginis DSM 18382 = JCM 14108	1423743	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.85951	42	-	AZFY01	157	2808	2651	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369501	GCA_001435875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/875/GCA_001435875.1_ASM143587v1	26415554	DSM 18382
Ensifer adhaerens OV14	1416753	PRJNA226081	226081	Proteobacteria	Alphaproteobacteria	7.70901	61.2768	chromosome 1:NZ_CP007236.1/CP007236.1; chromosome 2:NZ_CP007237.1/CP007237.1; plasmid pOV14b:NZ_CP007239.1/CP007239.1; plasmid pOV14c:NZ_CP007238.1/CP007238.1	-	4	7351	7033	2/28/14	4/9/17	Chromosome	Teagasc	SAMN03081535	GCA_000583045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/045/GCA_000583045.1_ASM58304v1	24708309	OV14
Candidatus Hepatoplasma crinochetorum	295596	PRJEB9152	283778	Terrabacteria group	Tenericutes	0.621166	23.4	-	CWGI01	2	595	563	6/25/15	6/25/15	Scaffold	Division of Microbial Ecology	SAMEA3387527	GCA_001179805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/805/GCA_001179805.1_Cand._Hepatoplasma_crinochetorum_Ps	-	Ps
Paenibacillus pini JCM 16418	1236976	PRJDB674	238519	Terrabacteria group	Firmicutes	4.9618	42	-	BAZT01	68	4722	4132	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00000453	GCA_001315125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/125/GCA_001315125.1_ASM131512v1	-	JCM 16418
Sulfolobales archaeon AZ1	1326980	PRJNA273893	273893	TACK group	Crenarchaeota	1.76581	46.5	-	JZWS01	374	2101	1971	3/24/15	3/24/15	Contig	Center for Genomic Sciences	SAMN03323732	GCA_000961135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/135/GCA_000961135.1_ASM96113v1	-	-
Mycobacterium aromaticivorans JS19b1 = JCM 16368	1440774	PRJDB974	245883	Terrabacteria group	Actinobacteria	5.19965	65.6	-	BBHC01	2798	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017017	GCA_001314125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/125/GCA_001314125.1_ASM131412v1	-	JCM 16368
Ochrobactrum rhizosphaerae	571254	PRJNA391102	391102	Proteobacteria	Alphaproteobacteria	4.90401	53	-	NNRK01	36	4648	4481	8/15/17	8/17/17	Contig	Intercollegiate Faculty of Biotechnology UG&MUG	SAMN07258022	GCA_002252475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/475/GCA_002252475.1_ASM225247v1	-	PR17
Methanobrevibacter oralis JMR01	1415626	PRJEB4880	232705	Euryarchaeota	Methanobacteria	2.10783	28	-	CBWS01	14	2069	1642	1/6/14	4/9/17	Scaffold	URMITE	SAMEA3138857	GCA_000529525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/525/GCA_000529525.1_Methanobrevibacter_oralis_JMR01	-	JMR01
Streptococcus oralis subsp. dentisani	1458253	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.83421	41.4	-	NCUZ01	20	1780	1685	4/18/17	4/21/17	Contig	Slagelse Hospital	SAMN06705609	GCA_002096675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/675/GCA_002096675.1_ASM209667v1	27325438	RH_55407_11
Bacillus ginsengihumi	363870	PRJNA263556	263556	Terrabacteria group	Firmicutes	3.72182	36.1	-	JRUN01	140	3668	3111	11/21/14	4/9/17	Contig	Kazan (Volga region) Federal University	SAMN03103727	GCA_000786015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/015/GCA_000786015.1_Bac_ginsengihumi_spades2	26272561	M2.11
Corynebacterium falsenii	108486	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.18363	61.2	-	JVKJ01	5	1923	1834	7/10/15	4/10/17	Contig	University of Washington	SAMN03197545	GCA_001054945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/945/GCA_001054945.1_ASM105494v1	26230489	355_CFAL
Kutzneria albida	43357	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.7585	70.2	-	JNYH01	1732	-	-	7/1/14	5/13/16	Scaffold	University of Illinois	SAMN02645308	GCA_000715805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/805/GCA_000715805.1_ASM71580v1	-	NRRL B-24060
Candidatus Entotheonella sp. TSY2	1429439	PRJNA230051	230051	Nitrospinae/Tectomicrobia group	Candidatus Tectomicrobia	9.94778	54.9	-	AZHX01	1914	9043	8989	1/22/14	1/31/14	Scaffold	Bielefeld University	SAMN02420414	GCA_000522445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/445/GCA_000522445.1_v3	24476823	-
Aminobacter sp. J41	935261	PRJNA202360	202360	Proteobacteria	Alphaproteobacteria	4.23463	63.3	-	JAGL01	113	4046	3803	1/14/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02584954	GCA_000526635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/635/GCA_000526635.1_ASM52663v1	-	J41
Lebetimonas sp. JH292	990068	PRJNA208428	208428	Proteobacteria	delta/epsilon subdivisions	1.641	31.4	-	ATHQ01	5	1851	1650	1/24/14	4/17/17	Contig	Marine Biological Lab	SAMN02203749	GCA_000523275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/275/GCA_000523275.1_LebetimonasJH292	24257443	JH292
Aphanizomenon flos-aquae 2012/KM1/D3	1532906	PRJNA257725	257725	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.74177	38.2	-	JSDP01	325	5717	4558	12/4/14	4/9/17	Contig	Vilnius University	SAMN02954153	GCA_000789435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/435/GCA_000789435.1_ASM78943v1	25593252	2012/KM1/D3
Pseudomonas corrugata	47879	PRJEB16504	349427	Proteobacteria	Gammaproteobacteria	6.15084	60.6	chromosome I:NZ_LT629798.1/LT629798.1	-	1	5411	5203	10/21/16	4/5/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04490183	GCA_900106085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/085/GCA_900106085.1_IMG-taxon_2639763195_annotated_assembly	-	BS3649
Mycobacterium gastri	1777	PRJNA299467	299467	Terrabacteria group	Actinobacteria	5.81666	66.2	-	LQOX01	154	5259	4859	4/20/17	4/22/17	Contig	University of Trento	SAMN04216928	GCA_002102175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/175/GCA_002102175.1_ASM210217v1	-	DSM 43505
Aquimarina megaterium	1443666	PRJEB14417	326356	FCB group	Bacteroidetes/Chlorobi group	6.27071	32.9	-	FLRG01	20	5342	5225	6/21/16	4/13/17	Contig	CENTRE OF MARINE SCIENCES	SAMEA4034450	GCA_900089995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/995/GCA_900089995.1_EL331	-	EL33
Streptomyces exfoliatus DSM 41693	1440059	PRJNA232297	232297	Terrabacteria group	Actinobacteria	8.84759	71.8	-	AZSS01	367	8197	7519	1/13/14	3/9/17	Contig	"Department of Biochemistry and Molecular Biology, Facultad de Biologia, Universidad Complutense de Madrid"	SAMN02597357	GCA_000518045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/045/GCA_000518045.1_StrExf1.0	24504004	DSM 41693
Tenacibaculum sp. 47A_GOM-205m	1380384	PRJNA213772	213772	FCB group	Bacteroidetes/Chlorobi group	2.89786	31.8	-	JADN01	11	2767	2700	1/10/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02584984	GCA_000518405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/405/GCA_000518405.1_ASM51840v1	-	47A_GOM-205m
Sodalis sp. TME1	1912097	PRJNA349489	349489	Proteobacteria	Gammaproteobacteria	3.41987	56.3	-	MNBX01	679	3462	2289	11/15/16	11/15/16	Scaffold	CCG-UNAM	SAMN05931173	GCA_001879235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/235/GCA_001879235.1_ASM187923v1	-	TME1
Bacillus boroniphilus JCM 21738	1294265	PRJDB823	233589	Terrabacteria group	Firmicutes	4.36454	42	-	BBCO01	240	4477	3307	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00000546	GCA_001315165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/165/GCA_001315165.1_ASM131516v1	-	JCM 21738
Pseudomonas cichorii	36746	PRJEB16238	348972	Proteobacteria	Gammaproteobacteria	5.92006	58.1	-	FNIK01	55	5184	4988	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216599	GCA_900104015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/015/GCA_900104015.1_IMG-taxon_2667527209_annotated_assembly	-	ATCC 10857
Klebsiella pneumoniae	573	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	5.80682	56.6527	chromosome:NZ_CP021696.1/CP021696.1; plasmid tig00000161:NZ_CP021697.1/CP021697.1; plasmid tig00000183:NZ_CP021698.1/CP021698.1; plasmid tig00000727:NZ_CP021699.1/CP021699.1; plasmid tig00003569alt:NZ_CP021700.1/CP021700.1	-	5	5887	5512	6/8/17	6/10/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014999	GCA_002180255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/255/GCA_002180255.1_ASM218025v1	-	AR_0158
Bacillus akibai JCM 9157	1236973	PRJDB671	232558	Terrabacteria group	Firmicutes	4.74037	37	-	BAZQ01	142	4707	4253	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00000477	GCA_001315085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/085/GCA_001315085.1_ASM131508v1	-	JCM 9157
Planomicrobium glaciei CHR43	1273538	PRJNA184049	184049	Terrabacteria group	Firmicutes	3.9008	47	-	AUYR01	103	3803	3716	1/6/14	4/9/17	Contig	"CSIR-Institute of Himalayan Bioresource Technology, Palampur"	SAMN02597356	GCA_000513535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/535/GCA_000513535.1_denovo	24503999	CHR43
Methanobrevibacter arboriphilus JCM 9315	1293039	PRJDB785	243697	Euryarchaeota	Methanobacteria	2.27983	26.3	-	BBBD01	629	2137	1681	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00000480	GCA_001315885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/885/GCA_001315885.1_ASM131588v1	-	JCM 9315
Bacillus hemicellulosilyticus JCM 9152	1236971	PRJDB669	232557	Terrabacteria group	Firmicutes	4.53806	38.2	-	BAZO01	102	4270	3875	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00000476	GCA_001315065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/065/GCA_001315065.1_ASM131506v1	-	JCM 9152
Sediminibacillus halophilus NSP9.3	1401260	PRJNA219366	219366	Terrabacteria group	Firmicutes	3.986	44.1	-	AWXX01	10	3915	3791	11/14/13	4/9/17	Scaffold	Directorate of Groundnut Research (Indian Council of Agricultural Research)	SAMN02469734	GCA_000496855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/855/GCA_000496855.1_GS_De_Novo	24407641	NSP9.3
Selenomonas sp. oral taxon 136	713030	PRJNA282954	282954	Terrabacteria group	Firmicutes	2.45807	56.6415	chromosome:NZ_CP014239.1/CP014239.1; plasmid unnamed1:NZ_CP014240.1/CP014240.1	-	2	2456	2259	2/9/16	4/16/17	Complete Genome	The Forsyth Institute	SAMN04435856	GCA_001554015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/015/GCA_001554015.1_ASM155401v1	-	F0591
Bacillus wakoensis JCM 9140	1236970	PRJDB668	232556	Terrabacteria group	Firmicutes	4.53094	38.3	-	BAZN01	187	4493	3975	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00000475	GCA_001315045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/045/GCA_001315045.1_ASM131504v1	-	JCM 9140
Bradyrhizobium liaoningense CCBAU 83689	1128288	PRJNA77219	77219	Proteobacteria	Alphaproteobacteria	8.00982	63.8	-	AJQD01	1133	7966	6843	5/3/12	5/18/17	Contig	China Agricultural University	SAMN02469477	GCA_000261665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/665/GCA_000261665.1_83689	22586130	CCBAU 83689
Lactobacillus namurensis str. Chizuka 01	1302286	PRJDB914	232339	Terrabacteria group	Firmicutes	2.59342	51.9	-	BAOT01	97	2424	2289	12/20/13	4/9/17	Contig	Kyushu University	SAMD00036670	GCA_000511795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/795/GCA_000511795.1_ASM51179v1	24504001	Chizuka 01
Bacillus tequilensis	227866	PRJNA288623	288623	Terrabacteria group	Firmicutes	4.03855	43.7	-	LGRW01	12	4172	4012	9/4/15	4/11/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN03835251	GCA_001278955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/955/GCA_001278955.1_ASM127895v1	-	FJAT-14262a
Rhodanobacter denitrificans	666685	PRJNA89551	89551	Proteobacteria	Gammaproteobacteria	3.97554	67.3	-	AJXV01	340	3589	3443	5/23/12	4/7/17	Contig	NIH	SAMN02472265	GCA_000264355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/355/GCA_000264355.1_Rh24678	22843592	116-2
Thalassobacillus devorans	279813	PRJEB20356	382225	Terrabacteria group	Firmicutes	4.07075	43	-	FXEH01	6	4077	3931	4/25/17	5/1/17	Contig	URMITE	SAMEA103966777	GCA_900176565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/565/GCA_900176565.1_PRJEB20356	-	Marseille-P394
Geoalkalibacter subterraneus	483547	PRJNA263118	263118	Proteobacteria	delta/epsilon subdivisions	3.71765	56.6353	chromosome:NZ_CP010311.1/CP010311.1; plasmid pGSUB1:NZ_CP010312.1/CP010312.1	-	2	3587	3458	1/21/15	4/17/17	Complete Genome	University of Minnesota	SAMN03096814	GCA_000827125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/827/125/GCA_000827125.1_ASM82712v1	25767222	Red1
Parvimonas sp. oral taxon 110 str. F0139	767100	PRJNA49295	49295	Terrabacteria group	Firmicutes	1.55646	28.2	-	AFII01	2	1574	1336	5/23/11	4/17/17	Contig	J. Craig Venter Institute	SAMN00031761	GCA_000214475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/475/GCA_000214475.2_ASM21447v1	-	F0139
Brucella inopinata BO1	470735	PRJNA230241	230241	Proteobacteria	Alphaproteobacteria	3.20768	57.3	-	AZBI02	212	3031	2585	5/1/14	10/21/14	Contig	Smi	SAMN02427355	GCA_000662015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/015/GCA_000662015.2_Binopinata2.0	25278518	BO1
Bradyrhizobium yuanmingense CCBAU 05623	1128326	PRJNA77219	77219	Proteobacteria	Alphaproteobacteria	8.24575	63.8	-	AJQJ01	570	8077	7249	5/3/12	5/18/17	Contig	China Agricultural University	SAMN02469473	GCA_000261785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/785/GCA_000261785.1_05623	22586130	CCBAU 05623
Paraburkholderia sprentiae WSM5005	754502	PRJNA66661	66661	Proteobacteria	Betaproteobacteria	7.76106	63.2	-	AXBN01	8	7105	6589	9/30/13	4/10/17	Scaffold	DOE Joint Genome Institute	SAMN02440780	GCA_000473465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/465/GCA_000473465.1_ASM47346v1	-	WSM5005
Clostridioides mangenotii TR	1408823	PRJNA223331	223331	Terrabacteria group	Firmicutes	3.05244	31.3	-	AXUS01	82	2977	2677	11/25/13	4/9/17	Contig	Gateway Technical College	SAMN02469806	GCA_000498755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/755/GCA_000498755.1_NGEN_DNA_Star_	24407632	TR
Bordetella trematum CCUG 13902	1392839	PRJNA217370	217370	Proteobacteria	Betaproteobacteria	4.46463	65.7	-	AWNL01	83	4148	4017	9/26/13	4/9/17	Contig	University of British Columbia	SAMN02335433	GCA_000471705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/705/GCA_000471705.1_Btrematum1.0	24158552	CCUG 13902
Mycobacterium iranicum	912594	PRJNA317657	317657	Terrabacteria group	Actinobacteria	6.48479	66.1	-	LWCS01	108	6150	5927	5/24/16	4/12/17	Contig	UC Berkeley	SAMN04622670	GCA_001650495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/495/GCA_001650495.1_ASM165049v1	-	H39
Exiguobacterium chiriqhucha	1385984	PRJNA218041	218041	Terrabacteria group	Firmicutes	2.97464	52.1	-	JNIP01	2	3072	2929	6/11/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02841156	GCA_000702565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/565/GCA_000702565.1_ASM70256v1	25323723	GIC31
Klebsiella pneumoniae	573	PRJNA329409	329409	Proteobacteria	Gammaproteobacteria	5.90769	56.635	chromosome:NZ_CP018701.1/CP018701.1; plasmid pKp_Goe_024-1:NZ_CP018702.1/CP018702.1; plasmid pKp_Goe_024-2:NZ_CP018704.1/CP018704.1; plasmid pKp_Goe_024-3:NZ_CP018706.1/CP018706.1; plasmid pKp_Goe_024-4:NZ_CP018705.1/CP018705.1; plasmid pKp_Goe_024-5:NZ_CP018703.1/CP018703.1	-	6	5931	5653	12/19/16	2/22/17	Complete Genome	University Medical Center Goettingen	SAMN05412797	GCA_001908625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/625/GCA_001908625.1_ASM190862v1	-	Kp_Goe_827024
Martelella sp. AD-3	686597	PRJNA222720	222720	Proteobacteria	Alphaproteobacteria	4.75361	62.3	-	AYGY02	197	4518	4277	11/8/13	4/9/17	Contig	Shanghai Jiao Tong University	SAMN02471023	GCA_000496305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/305/GCA_000496305.2_ASM49630v2	24435873	AD-3
Pacificimonas flava	1234595	PRJNA378462	378462	Proteobacteria	Alphaproteobacteria	3.35243	64.2	-	NFZT01	7	3160	3068	6/29/17	7/1/17	Scaffold	Xiamen University	SAMN06480608	GCA_002211145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/145/GCA_002211145.1_ASM221114v1	-	JLT2012
Cronobacter sakazakii	28141	PRJNA276173	276173	Proteobacteria	Gammaproteobacteria	4.66357	56.6285	chromosome:NZ_CP011047.1/CP011047.1; plasmid CSK29544_1p:NZ_CP011048.1/CP011048.1; plasmid CSK29544_2p:NZ_CP011049.1/CP011049.1; plasmid CSK29544_3p:NZ_CP011050.1/CP011050.1	-	4	4646	4270	4/30/15	4/3/17	Complete Genome	Food-borne Pathogen Omics Research Center	SAMN03371468	GCA_000982825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/825/GCA_000982825.1_ASM98282v1	-	ATCC 29544
Klebsiella pneumoniae	573	PRJNA329409	329409	Proteobacteria	Gammaproteobacteria	5.9135	56.6278	chromosome:NZ_CP018707.1/CP018707.1; plasmid pKp_Goe_026-1:NZ_CP018708.1/CP018708.1; plasmid pKp_Goe_026-2:NZ_CP018710.1/CP018710.1; plasmid pKp_Goe_026-3:NZ_CP018712.1/CP018712.1; plasmid pKp_Goe_026-4:NZ_CP018711.1/CP018711.1; plasmid pKp_Goe_026-5:NZ_CP018709.1/CP018709.1	-	6	5932	5658	12/19/16	2/22/17	Complete Genome	University Medical Center Goettingen	SAMN05412802	GCA_001908655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/655/GCA_001908655.1_ASM190865v1	-	Kp_Goe_827026
Luteimonas sp. JM171	1896164	PRJNA340268	340268	Proteobacteria	Gammaproteobacteria	2.99235	69	chromosome:NZ_CP017074.1/CP017074.1	-	1	2795	2693	8/31/16	8/28/17	Chromosome	University of Hawaii at Manoa	SAMN05711034	GCA_001717465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/465/GCA_001717465.1_ASM171746v1	27811107	JM171
Atribacteria bacterium JGI 0000014-F07	1104602	PRJEB8058	282870	unclassified Bacteria	Bacteria candidate phyla	1.04028	35	-	CDPM01	291	1007	878	5/2/15	8/1/17	Contig	CARDIFF	SAMEA3178400	GCA_001006985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/985/GCA_001006985.1_SAG_I22	-	-
Marinimicrobium sp. UBA4209	1946810	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.76019	58.6	-	DFTP01	119	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455426	GCA_002381585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/585/GCA_002381585.1_ASM238158v1	28894102	-
Arenitalea lutea	1178825	PRJEB18282	355698	FCB group	Bacteroidetes/Chlorobi group	3.37793	33.3	-	FQYK01	18	2988	2907	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216261	GCA_900141715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/715/GCA_900141715.1_IMG-taxon_2667528186_annotated_assembly	-	CGMCC 1.12213
Desulfonauticus sp. 38_4375	1635258	PRJNA278302	278302	Proteobacteria	delta/epsilon subdivisions	2.13383	38.2	-	LGER01	107	2189	2189	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445116	GCA_001507915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/915/GCA_001507915.1_ASM150791v1	26787827	-
Chloroflexi bacterium oral taxon 439 isolate Chl2	1311575	PRJNA194442	194442	Terrabacteria group	Chloroflexi	1.16002	53.9	-	APVJ01	113	-	-	6/4/13	7/29/15	Contig	Oak Ridge National Laboratory	SAMN02470748	GCA_000406805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/805/GCA_000406805.1_Chl2	24738594	-
Spongiibacter tropicus	454602	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.48001	57	-	DBGQ01	141	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450329	GCA_002295445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/445/GCA_002295445.1_ASM229544v1	28894102	-
Candidatus Microthrix parvicella Bio17-1	1231054	PRJNA174686	174686	Terrabacteria group	Actinobacteria	4.20285	66.4	-	AMPG01	13	3923	3783	9/27/12	5/18/17	Contig	Luxembourg Centre for Systems Biomedecine	SAMN01730125	GCA_000299415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/415/GCA_000299415.1_ASM29941v1	23144412	Bio17-1
Klebsiella pneumoniae	573	PRJNA329409	329409	Proteobacteria	Gammaproteobacteria	5.92094	56.6265	chromosome:NZ_CP018140.1/CP018140.1; plasmid pKp_Goe_579-1:NZ_CP018313.1/CP018313.1; plasmid pKp_Goe_579-2:NZ_CP018318.1/CP018318.1; plasmid pKp_Goe_579-3:NZ_CP018315.1/CP018315.1; plasmid pKp_Goe_579-4:NZ_CP018316.1/CP018316.1; plasmid pKp_Goe_579-5:NZ_CP018317.1/CP018317.1; plasmid pKp_Goe_579-6:NZ_CP018314.1/CP018314.1	-	7	5946	5666	11/22/16	2/22/17	Complete Genome	University Medical Center Goettingen	SAMN05412444	GCA_001885255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/255/GCA_001885255.2_ASM188525v2	-	Kp_Goe_822579
Zhouia amylolytica AD3	1286632	PRJNA217472	217472	FCB group	Bacteroidetes/Chlorobi group	3.7877	36.7	-	AYXY01	31	3274	3203	12/26/13	4/11/17	Contig	"School of Biological Sciences, Chung-Ang University"	SAMN02597344	GCA_000511935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/935/GCA_000511935.2_CLCbio_CLC_Genomics_Workbench_5.5	27151796	AD3
Klebsiella pneumoniae	573	PRJNA329409	329409	Proteobacteria	Gammaproteobacteria	5.92138	56.6264	chromosome:NZ_CP018713.1/CP018713.1; plasmid pKp_Goe_021-1:NZ_CP018714.1/CP018714.1; plasmid pKp_Goe_021-2:NZ_CP018716.1/CP018716.1; plasmid pKp_Goe_021-3:NZ_CP018717.1/CP018717.1; plasmid pKp_Goe_021-4:NZ_CP018718.1/CP018718.1; plasmid pKp_Goe_021-5:NZ_CP018715.1/CP018715.1	-	6	5935	5654	12/19/16	2/22/17	Complete Genome	University Medical Center Goettingen	SAMN05412803	GCA_001908675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/675/GCA_001908675.1_ASM190867v1	-	Kp_Goe_152021
Staphylococcus cohnii hu-01	1415164	PRJNA225658	225658	Terrabacteria group	Firmicutes	2.7355	32.3	-	AYOS02	100	2654	2476	1/6/14	4/2/17	Contig	Zhejiang University	SAMN02388844	GCA_000513495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/495/GCA_000513495.2_ASM51349v2	-	hu-01
Klebsiella pneumoniae	573	PRJNA329409	329409	Proteobacteria	Gammaproteobacteria	5.91632	56.6259	chromosome:NZ_CP018686.1/CP018686.1; plasmid pKp_Goe_473-1:NZ_CP018687.1/CP018687.1; plasmid pKp_Goe_473-2:NZ_CP018689.1/CP018689.1; plasmid pKp_Goe_473-3:NZ_CP018690.1/CP018690.1; plasmid pKp_Goe_473-4:NZ_CP018691.1/CP018691.1; plasmid pKp_Goe_473-5:NZ_CP018688.1/CP018688.1	-	6	5935	5658	12/19/16	2/22/17	Complete Genome	University Medical Center Goettingen	SAMN05412458	GCA_001908595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/595/GCA_001908595.1_ASM190859v1	-	Kp_Goe_149473
Aeromonas dhakensis AAK1	1156800	PRJDB70	159483	Proteobacteria	Gammaproteobacteria	4.76769	61.7937	plasmid pAAk1:NC_019014.1/AP012343.1	BAFL01	37	4380	4214	4/17/12	5/18/17	Contig	"National Institute of Infectious Diseases and Vaccinology, National Health Research Institutes (NHRI), Taiwan"	SAMD00036618	GCA_000315195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/195/GCA_000315195.1_ASM31519v1	22815437	AAK1
Borrelia parkeri SLO	1313294	PRJNA195597	195597	Spirochaetes	Spirochaetia	1.05329	29.3249	chromosome:NZ_CP005851.2/CP005851.2	-	74	1021	877	1/27/14	4/13/17	Chromosome	Integrated Genomics	SAMN03081465	GCA_000568735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/735/GCA_000568735.2_ASM56873v2	-	SLO
Borrelia anserina BA2	1313293	PRJNA195596	195596	Spirochaetes	Spirochaetia	1.14735	29.3732	chromosome:NZ_CP005829.1/CP005829.1	-	22	1083	981	1/27/14	4/21/17	Chromosome	Integrated Genomics	SAMN03081464	GCA_000568655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/655/GCA_000568655.1_ASM56865v1	-	BA2
Borrelia coriaceae ATCC 43381	1408429	PRJNA223124	223124	Spirochaetes	Spirochaetia	1.5757	29.5	-	JACZ01	55	1467	1329	1/10/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02585009	GCA_000518125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/125/GCA_000518125.1_ASM51812v1	-	ATCC 43381
Candidatus Atelocyanobacterium thalassa isolate SIO64986	1527444	PRJNA256120	256120	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.4855	30.9	-	JPSP01	52	1295	1246	8/5/14	2/10/15	Contig	"University of California, Santa Cruz"	SAMN02940555	GCA_000737945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/945/GCA_000737945.1_ASM73794v1	25226029	-
Pseudoalteromonas lipolytica	570156	PRJNA295758	295758	Proteobacteria	Gammaproteobacteria	4.58695	41.1	-	LJTC01	69	4216	4040	10/5/15	4/11/17	Contig	UC Davis	SAMN04088200	GCA_001306915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/915/GCA_001306915.1_ASM130691v1	26893412	UCD-48B
Klebsiella pneumoniae	573	PRJNA329409	329409	Proteobacteria	Gammaproteobacteria	5.91408	56.6249	chromosome:NZ_CP018719.1/CP018719.1; plasmid pKp_Goe_304-1:NZ_CP018720.1/CP018720.1; plasmid pKp_Goe_304-2:NZ_CP018722.1/CP018722.1; plasmid pKp_Goe_304-3:NZ_CP018723.1/CP018723.1; plasmid pKp_Goe_304-4:NZ_CP018724.1/CP018724.1; plasmid pKp_Goe_304-5:NZ_CP018721.1/CP018721.1	-	6	5938	5662	12/19/16	2/22/17	Complete Genome	University Medical Center Goettingen	SAMN05412804	GCA_001908695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/695/GCA_001908695.1_ASM190869v1	-	KP_Goe_828304
Klebsiella sp. KPN1705	2026240	PRJNA376414	376414	Proteobacteria	Gammaproteobacteria	5.94671	56.6244	chromosome:NZ_CP022823.1/CP022823.1; plasmid pKPN1705-1:NZ_CP022824.1/CP022824.1; plasmid pKPN1705-2:NZ_CP022825.1/CP022825.1; plasmid pKPN1705-3:NZ_CP022826.1/CP022826.1	-	4	6069	5701	8/24/17	8/27/17	Complete Genome	Houston Methodist Hospital	SAMN06438648	GCA_002269255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/255/GCA_002269255.1_ASM226925v1	-	KPN1705
Candidatus Synechococcus spongiarum	431041	PRJEB12597	319515	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.40948	61.9	-	FITM01	179	1505	1338	7/29/16	4/5/17	Contig	GeneWiz	SAMEA3861759	GCA_900047545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/545/GCA_900047545.1_m9	-	-
Ehrlichia cf. muris str. EmCRT	1359167	PRJNA212449	212449	Proteobacteria	Alphaproteobacteria	1.14896	29.8	-	LANU01	3	924	866	3/27/15	4/10/17	Contig	IGS	SAMN02402773	GCA_000964755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/755/GCA_000964755.1_ASM96475v1	-	EmCRT
Porphyromonas crevioricanis JCM 15906	1305617	PRJDB964	231353	FCB group	Bacteroidetes/Chlorobi group	2.04481	45.3	-	BAOU01	118	1774	1672	6/6/13	4/9/17	Contig	"Microbe Division/Japan Collection of Microorganisms, RIKEN BioResource Center"	SAMD00036671	GCA_000509245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/509/245/GCA_000509245.1_ASM50924v1	23887912	JCM 15906
Salinivibrio sp. DV	1892894	PRJNA339955	339955	Proteobacteria	Gammaproteobacteria	3.71086	49.8	-	MEBP01	145	3419	3268	9/8/16	4/17/17	Contig	University of the Western Cape	SAMN05615492	GCA_001722075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/075/GCA_001722075.1_ASM172207v1	-	DV
Legionella oakridgensis	29423	PRJNA281306	281306	Proteobacteria	Gammaproteobacteria	2.71171	40.8	-	LCUA01	49	2541	2452	5/19/16	4/17/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03486967	GCA_001648605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/605/GCA_001648605.1_ASM164860v1	-	ATCC 33761
Methylibium sp. CF468	1500262	PRJNA247582	247582	Proteobacteria	Betaproteobacteria	6.85393	69	-	JUGZ01	72	6212	6030	12/9/14	4/10/17	Scaffold	DOE Joint Genome Institute	SAMN02787116	GCA_000799605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/605/GCA_000799605.1_ASM79960v1	-	CF468
Williamsia sp. Leaf354	1736349	PRJNA297956	297956	Terrabacteria group	Actinobacteria	4.56665	68.9	-	LMPL01	5	4227	4130	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151739	GCA_001424365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/365/GCA_001424365.1_Leaf354	26633631	Leaf354
Lactobacillus equi DSM 15833 = JCM 10991	1423740	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.28421	39	-	AZFH01	205	2211	2074	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369395	GCA_001435735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/735/GCA_001435735.1_ASM143573v1	26415554	DSM 15833
Streptomyces niveus NCIMB 11891	1352941	PRJNA210149	210149	Terrabacteria group	Actinobacteria	8.72688	70.2746	chromosome:NZ_CM002280.1/CM002280.1; plasmid pSniv1:NZ_CM002281.1/CM002281.1; plasmid pSniv2:NZ_CM002282.1/CM002282.1; plasmid pSniv3:NZ_CM002283.1/CM002283.1; plasmid pSniv4:NZ_CM002284.1/CM002284.1	AWQW01	5	7864	7306	11/19/13	3/9/17	Chromosome	GenBioCom	SAMN02469390	GCA_000497425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/425/GCA_000497425.1_S.niveus_v1	24407644	NCIMB 11891
Klebsiella pneumoniae	573	PRJNA329409	329409	Proteobacteria	Gammaproteobacteria	5.92029	56.6244	chromosome:NZ_CP018695.1/CP018695.1; plasmid pKp_Goe_832-1:NZ_CP018696.1/CP018696.1; plasmid pKp_Goe_832-2:NZ_CP018698.1/CP018698.1; plasmid pKp_Goe_832-3:NZ_CP018700.1/CP018700.1; plasmid pKp_Goe_832-4:NZ_CP018699.1/CP018699.1; plasmid pKp_Goe_832-5:NZ_CP018697.1/CP018697.1	-	6	5935	5657	12/19/16	2/22/17	Complete Genome	University Medical Center Goettingen	SAMN05412459	GCA_001908875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/875/GCA_001908875.1_ASM190887v1	-	Kp_Goe_149832
Thermophagus xiamenensis	385682	PRJEB17237	351433	FCB group	Bacteroidetes/Chlorobi group	3.89956	39.1	-	FONA01	58	3021	2930	10/31/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444380	GCA_900112795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/795/GCA_900112795.1_IMG-taxon_2693429893_annotated_assembly	-	DSM 19012
Asticcacaulis sp. AC466	1282362	PRJNA186532	186532	Proteobacteria	Alphaproteobacteria	4.70003	58.8	-	AWGE01	70	4213	4118	11/6/13	4/9/17	Contig	Indiana University	SAMN02469918	GCA_000495815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/815/GCA_000495815.1_AspAC466.1.0	24463524	AC466
Lactobacillus fabifermentans T30PCM01	1400520	PRJNA219157	219157	Terrabacteria group	Firmicutes	3.58041	44.9	-	AWWK01	94	3406	3281	1/24/14	4/9/17	Scaffold	University of Padova	SAMN02356208	GCA_000565485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/485/GCA_000565485.1_Lfabi1.0	24558238	T30PCM01
Klebsiella pneumoniae	573	PRJNA329409	329409	Proteobacteria	Gammaproteobacteria	5.85129	56.6242	chromosome:NZ_CP018337.1/CP018337.1; plasmid pKp_Goe_414-1:NZ_CP018339.1/CP018339.1; plasmid pKp_Goe_414-2:NZ_CP018338.1/CP018338.1; plasmid pKp_Goe_414-3:NZ_CP018340.1/CP018340.1; plasmid pKp_Goe_414-4:NZ_CP018341.1/CP018341.1; plasmid pKp_Goe_414-5:NZ_CP018342.1/CP018342.1; plasmid pKp_Goe_414-6:NZ_CP018343.1/CP018343.1	-	7	5972	5618	12/13/16	2/21/17	Complete Genome	University Medical Center Goettingen	SAMN05412805	GCA_001902335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/335/GCA_001902335.1_ASM190233v1	-	-
Mucispirillum schaedleri ASF457	1379858	PRJEB13534	359546	Deferribacteres	Deferribacteres	2.33698	31.2	-	FTRD01	36	2186	2119	1/20/17	4/17/17	Contig	Division of Microbial Ecology University of Vienna	SAMEA50734918	GCA_900157005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/005/GCA_900157005.1_MCSV2	-	-
Smithella sp. ME-1	1380771	PRJNA213885	213885	Proteobacteria	delta/epsilon subdivisions	2.90764	41.9	-	AWGX01	1037	711	705	11/4/13	11/4/13	Contig	"University of California, San Diego"	SAMN02303524	GCA_000495415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/415/GCA_000495415.1_Smith1.0	24152715	ME-1
Bacillus toyonensis	155322	PRJNA284401	284401	Terrabacteria group	Firmicutes	5.74081	34.9	-	LDKD02	38	6043	5706	8/26/15	4/17/17	Scaffold	Federal University of Vicosa	SAMN03701980	GCA_001275045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/045/GCA_001275045.2_ASM127504v2	24031988	BAC3151
Candidatus Phytoplasma solani	69896	PRJEB1230	238029	Terrabacteria group	Tenericutes	0.545458	29.7	chromosome:FO393428.1	-	1	573	573	10/22/13	11/3/16	Chromosome	MPIMG	SAMEA4532331	GCA_000970395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/395/GCA_000970395.1_ASM97039v1	-	231/09
Prevotella brevis P6B11	1410666	PRJNA223450	223450	FCB group	Bacteroidetes/Chlorobi group	3.21697	49.2	-	JHXG01	22	2520	2435	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02744007	GCA_000621825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/825/GCA_000621825.1_ASM62182v1	-	P6B11
Yersinia sp. n.51	1341639	PRJEB3988	221829	Proteobacteria	Gammaproteobacteria	5.81803	46.9	-	CBLF01	2423	-	-	9/25/13	1/30/15	Scaffold	IP	SAMEA2272679	GCA_000493635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/635/GCA_000493635.1_1_No51	-	No51
Kandleria vitulina WCE2011	1410659	PRJNA223465	223465	Terrabacteria group	Firmicutes	2.03615	35	-	JHXA01	41	2068	1953	4/8/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02744019	GCA_000621925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/925/GCA_000621925.1_ASM62192v1	-	WCE2011
Pseudobutyrivibrio sp. LB2011	1408312	PRJNA223068	223068	Terrabacteria group	Firmicutes	2.8076	39	-	JNJS01	9	2597	2514	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841161	GCA_000701765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/765/GCA_000701765.1_ASM70176v1	-	LB2011
Franconibacter helveticus 1159	1405499	PRJNA221525	221525	Proteobacteria	Gammaproteobacteria	4.63451	55.9	-	AXDL01	161	4519	4278	10/29/13	4/9/17	Contig	"OARSA, CFSAN"	SAMN02364110	GCA_000486005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/005/GCA_000486005.1_Ehel1159.sqn	24336376	1159
Anaerovibrio sp. JC8	1240085	PRJNA176823	176823	Terrabacteria group	Firmicutes	2.68518	45.9	-	ANBM01	34	2490	2394	4/18/17	4/21/17	Contig	CSIRO	SAMN06754794	GCA_002100115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/115/GCA_002100115.1_ASM210011v1	-	JC8
Microbulbifer thermotolerans	252514	PRJNA315367	315367	Proteobacteria	Gammaproteobacteria	3.9384	56.6	chromosome:NZ_CP014864.1/CP014864.1	-	1	3303	3177	4/8/16	4/12/17	Complete Genome	Dong-A University	SAMN04556710	GCA_001617625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/625/GCA_001617625.1_ASM161762v1	-	DAU221
Leifsonia aquatica H1aii	1416759	PRJNA226211	226211	Terrabacteria group	Actinobacteria	4.57845	70.4	-	AYMR01	76	4352	4208	4/18/14	4/9/17	Contig	University of Malaya	SAMN02729857	GCA_000633535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/535/GCA_000633535.1_de_novo	-	H1aii
Alistipes finegoldii DSM 17242	679935	PRJNA40775	40775	FCB group	Bacteroidetes/Chlorobi group	3.73424	56.6	chromosome:NC_018011.1/CP003274.1	-	1	3259	3116	6/8/12	4/7/17	Complete Genome	DOE Joint Genome Institute	SAMN02232007	GCA_000265365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/365/GCA_000265365.1_ASM26536v1	-	DSM 17242
Yersinia similis	367190	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.85379	46.8	-	CGBP01	104	4557	4190	3/15/15	4/10/17	Contig	SC	SAMEA859916	GCA_001053095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/095/GCA_001053095.1_5139_1_3	-	Y228
Acidithiobacillus ferrivorans SS3	743299	PRJNA61509	61509	Proteobacteria	Acidithiobacillia	3.20755	56.6	chromosome:NC_015942.1/CP002985.1	-	1	3206	3016	8/17/11	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713557	GCA_000214095.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/095/GCA_000214095.3_ASM21409v3	21705598	SS3
Pragia fontium DSM 5563 = ATCC 49100	1122977	PRJEB17195	351295	Proteobacteria	Gammaproteobacteria	3.95085	45.3	-	FOLW01	29	3432	3312	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745723	GCA_900112475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/475/GCA_900112475.1_IMG-taxon_2602042030_annotated_assembly	-	DSM 5563
Franconibacter pulveris 1160	1406822	PRJNA222260	222260	Proteobacteria	Gammaproteobacteria	4.8111	56.5	-	AXSZ01	137	4641	4390	10/29/13	4/9/17	Contig	"OARSA, CFSAN"	SAMN02369275	GCA_000485965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/965/GCA_000485965.1_Epul1160	24309737	1160
Pantoea dispersa	59814	PRJNA278245	278245	Proteobacteria	Gammaproteobacteria	4.88722	57.8	-	LDRZ01	42	4555	4409	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401410	GCA_001476295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/295/GCA_001476295.1_ASM147629v1	26793183	NS375
Klebsiella pneumoniae	573	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	6.05428	56.5739	chromosome:NZ_CP021960.1/CP021960.1; plasmid tig00000002_u:NZ_CP021958.1/CP021958.1; plasmid tig00000003:NZ_CP021959.1/CP021959.1; plasmid tig00000006:NZ_CP021961.1/CP021961.1; plasmid tig00000008:NZ_CP021962.1/CP021962.1	-	5	6197	5843	6/20/17	6/22/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014980	GCA_002202195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/195/GCA_002202195.1_ASM220219v1	-	AR_0139
Klebsiella pneumoniae	573	PRJNA253300	253300	Proteobacteria	Gammaproteobacteria	5.99074	56.5508	chromosome:NZ_CP008929.1/CP008929.1; plasmid pPMK1-A:NZ_CP008930.1/CP008930.1; plasmid pPMK1-B:NZ_CP008931.1/CP008931.1; plasmid pPMK1-C:NZ_CP008932.1/CP008932.1; plasmid pPMK1-NDM:NZ_CP008933.1/CP008933.1	-	5	5990	5647	10/8/14	2/21/17	Complete Genome	University of Oxford	SAMN02885365	GCA_000764615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/615/GCA_000764615.1_ASM76461v1	25267672	PMK1
Exiguobacterium undae 190-11	1397695	PRJNA218044	218044	Terrabacteria group	Firmicutes	3.20851	47.8	-	JHZU01	4	3261	3161	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743959	GCA_000620825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/825/GCA_000620825.1_ASM62082v1	25323723	190-11
Planktothrix prolifica NIVA-CYA 540	1255359	PRJNA212884	212884	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.57439	39.6	-	AVFX01	3	4895	4627	9/6/13	4/9/17	Scaffold	University of Oslo	SAMN02261502	GCA_000464805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/805/GCA_000464805.1_NC540_1	23995927	NIVA-CYA 540
Leeuwenhoekiella sp. MAR_2009_132	1392489	PRJNA217203	217203	FCB group	Bacteroidetes/Chlorobi group	4.14076	40.2	-	JPOL01	4	3511	3412	7/24/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02745562	GCA_000733945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/945/GCA_000733945.1_ASM73394v1	-	MAR_2009_132
Vibrio albensis VL426	593585	PRJNA33549	33549	Proteobacteria	Gammaproteobacteria	3.98738	47.6	-	ACHV01	5	3726	3409	5/1/09	4/7/17	Contig	"Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR)"	SAMN02393807	GCA_000174235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/235/GCA_000174235.1_ASM17423v1	-	VL426
Klebsiella pneumoniae	573	PRJEB7538	304694	Proteobacteria	Gammaproteobacteria	5.9802	56.5426	chromosome _Chr_Kpneumoniae_MS6671:NZ_LN824133.1/LN824133.1; plasmid _Phage_Kpneumoniae_MS6671:NZ_LN824139.1/LN824139.1; plasmid _Plasmid_A_Kpneumoniae_MS6671:NZ_LN824134.1/LN824134.1; plasmid _Plasmid_B_Kpneumoniae_MS6671:NZ_LN824135.1/LN824135.1; plasmid _Plasmid_C_Kpneumoniae_MS6671:NZ_LN824136.1/LN824136.1; plasmid _Plasmid_D_Kpneumoniae_MS6671:NZ_LN824137.1/LN824137.1; plasmid _Plasmid_E_Kpneumoniae_MS6671:NZ_LN824138.1/LN824138.1	-	7	6068	5759	12/1/15	2/25/17	Complete Genome	UQ	SAMEA3257677	GCA_001455995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/995/GCA_001455995.1_MS6671.v1	-	MS6671
Lysinibacillus manganicus DSM 26584	1384049	PRJNA214585	214585	Terrabacteria group	Firmicutes	4.0472	34.9	-	AVDA01	81	3870	3798	6/19/17	6/22/17	Contig	Huazhong Agricultural University	SAMN07255462	GCA_002200865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/865/GCA_002200865.1_ASM220086v1	-	DSM 26584
Halonotius sp. J07HN4	1070774	PRJNA70847	70847	Euryarchaeota	Halobacteria	2.88866	60.5	-	AGCX01	2	3283	3226	6/26/13	9/4/13	Scaffold	University of California San Diego	SAMN01940911	GCA_000416065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/065/GCA_000416065.1_HN4_v3_031612	23637883	-
Corynebacterium pseudodiphtheriticum 090104	1381111	PRJNA213995	213995	Terrabacteria group	Actinobacteria	2.32806	55.3	-	AVFF01	48	2145	1829	9/13/13	4/9/17	Contig	Kingston Uniiversity	SAMN02298815	GCA_000466825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/825/GCA_000466825.2_ASM46682v2	24201200	90104
Thermofilum sp. ex4484_79	2012527	PRJNA362212	362212	TACK group	Crenarchaeota	1.60393	38.5	-	NJDK01	142	1781	1716	8/16/17	8/16/17	Contig	The University of Texas at Austin	SAMN06647978	GCA_002254645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/645/GCA_002254645.1_ASM225464v1	-	-
Lysinibacillus sinduriensis BLB-1 = JCM 15800	1384057	PRJNA214582	214582	Terrabacteria group	Firmicutes	4.01705	38.7	-	AVCY01	55	3893	3767	6/19/17	6/22/17	Contig	Huazhong Agricultural University	SAMN07255464	GCA_002200845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/845/GCA_002200845.1_ASM220084v1	-	JCM 15800
Klebsiella pneumoniae	573	PRJNA320133	320133	Proteobacteria	Gammaproteobacteria	6.08846	56.5414	chromosome:NZ_CP015500.1/CP015500.1; plasmid unnamed 1:NZ_CP015501.1/CP015501.1; plasmid unnamed 2:NZ_CP015502.1/CP015502.1; plasmid unnamed 3:NZ_CP015503.1/CP015503.1; plasmid unnamed 4:NZ_CP015504.1/CP015504.1; plasmid unnamed 5:NZ_CP015505.1/CP015505.1	-	6	6162	5797	5/16/16	2/21/17	Complete Genome	Sheikh Khalifa General Hospital(SKGH)	SAMN04917370	GCA_001644765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/765/GCA_001644765.1_ASM164476v1	-	SKGH01
Klebsiella pneumoniae	573	PRJNA378711	378711	Proteobacteria	Gammaproteobacteria	6.08113	56.5004	chromosome:NZ_CP020901.1/CP020901.1; plasmid pK66-45-1:NZ_CP020902.1/CP020902.1; plasmid pK66-45-2:NZ_CP020903.1/CP020903.1; plasmid pK66-45-3:NZ_CP020904.1/CP020904.1; plasmid pK66-45-4:NZ_CP020905.1/CP020905.1	-	5	6222	5890	4/27/17	5/3/17	Complete Genome	University of Oslo	SAMN04158282	GCA_002113865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/865/GCA_002113865.1_ASM211386v1	-	K66-45
Olleya sp. VCSM12	745718	PRJNA210207	210207	FCB group	Bacteroidetes/Chlorobi group	3.49179	31	-	JADT01	50	3209	3099	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02584978	GCA_000518525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/525/GCA_000518525.1_ASM51852v1	-	VCSM12
Microbulbifer agarilyticus S89	1042377	PRJNA67843	67843	Proteobacteria	Gammaproteobacteria	3.86276	56.8	-	AFPJ01	57	3217	3131	7/12/11	4/7/17	Contig	Korea Ocean Research and Development Institute	SAMN02470156	GCA_000220505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/505/GCA_000220505.2_ASM22050v2	21914866	S89
Rhizobium pusense	648995	PRJNA327083	327083	Proteobacteria	Alphaproteobacteria	6.01108	58.7	-	MAPG01	31	6027	5226	12/2/16	4/16/17	Scaffold	"Centro de Ciencias Genomicas, UNAM"	SAMN05301008	GCA_001888225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/225/GCA_001888225.1_ASM188822v1	27833604	CCGM11
Streptomyces aurantiacus JA 4570	1286094	PRJNA186840	186840	Terrabacteria group	Actinobacteria	8.76213	72	-	AOPZ01	568	7716	7082	6/24/13	3/9/17	Contig	University of Freiburg	SAMN01893928	GCA_000414115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/115/GCA_000414115.1_STRAU	-	JA 4570
Tannerella sp. oral taxon HOT-286	712710	PRJNA282954	282954	FCB group	Bacteroidetes/Chlorobi group	2.97353	56.5	chromosome:NZ_CP017038.1/CP017038.1	-	1	2495	2351	8/31/16	4/13/17	Complete Genome	The Forsyth Institute	SAMN05413928	GCA_001717525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/525/GCA_001717525.1_ASM171752v1	-	W11667
Shimwellia blattae DSM 4481 = NBRC 105725	630626	PRJNA36307	36307	Proteobacteria	Gammaproteobacteria	4.15872	56.5	chromosome:NC_017910.1/CP001560.1	-	1	3984	3778	5/10/12	4/7/17	Complete Genome	Georg August University Goettingen	SAMN02603253	GCA_000262305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/305/GCA_000262305.1_ASM26230v1	22843577	DSM 4481
Corynebacterium argentoratense	42817	PRJNA277059	277059	Terrabacteria group	Actinobacteria	2.02091	58.9	-	JZEZ01	121	1892	1663	4/15/15	4/10/17	Contig	AC-Gen Reading Life	SAMN03383977	GCA_000971865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/865/GCA_000971865.1_c.arg_CNM463_05_1.0	26159536	CNM 463/05
Sphingobium baderi LL03	1114964	PRJNA227257	227257	Proteobacteria	Alphaproteobacteria	4.69349	63.6	-	JACV01	11	4603	4391	7/2/15	4/11/17	Scaffold	CSIRO	SAMN02899865	GCA_001046655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/655/GCA_001046655.1_S.badLL03	25850427	LL03
Roseomonas gilardii subsp. rosea ATCC BAA-691	1336208	PRJNA204108	204108	Proteobacteria	Alphaproteobacteria	4.61201	70.7	-	JADY01	51	4238	4068	1/10/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02584973	GCA_000518625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/625/GCA_000518625.1_ASM51862v1	-	ATCC BAA-691
Flavobacterium saliperosum	329186	PRJEB16037	348492	FCB group	Bacteroidetes/Chlorobi group	2.89014	39.6	-	FMTY01	25	2717	2649	10/17/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02927925	GCA_900100625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/625/GCA_900100625.1_IMG-taxon_2596583547_annotated_assembly	-	CGMCC 1.3801
Brevibacillus thermoruber PM1	1382302	PRJNA214302	214302	Terrabacteria group	Firmicutes	4.92847	57.6	-	JQMH01	23	4883	4579	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02744997	GCA_000744635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/635/GCA_000744635.1_ASM74463v1	-	PM1
Catenibacterium sp. UBA627	1946309	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.01961	33.9	-	DBPF01	157	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450717	GCA_002299355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/355/GCA_002299355.1_ASM229935v1	28894102	-
Ignicoccus hospitalis KIN4/I	453591	PRJNA13914	13914	TACK group	Crenarchaeota	1.29754	56.5	chromosome:NC_009776.1/CP000816.1	-	1	1509	1448	8/29/07	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598324	GCA_000017945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/945/GCA_000017945.1_ASM1794v1	19000309	KIN4/I
Streptococcus phocae	119224	PRJNA291822	291822	Terrabacteria group	Firmicutes	1.70008	39.5	-	LHQM01	91	1697	1603	9/28/15	4/11/17	Contig	Universidad Andres Bello	SAMN03955537	GCA_001302265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/265/GCA_001302265.1_ASM130226v1	26586875	ATCC 51973
Odoribacter sp. N15.MGS-14	1637502	PRJNA277012	277012	FCB group	Bacteroidetes/Chlorobi group	3.44156	43.6	-	LARE01	226	-	-	4/24/15	6/10/15	Scaffold	The Mayo Clinic	SAMN03449998	GCA_000980245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/245/GCA_000980245.1_ASM98024v1	26021920	-
Chthonomonas calidirosea	454171	PRJEB4936	300508	Terrabacteria group	Armatimonadetes	3.43809	54.4	-	CDLE01	1	2876	2771	10/29/15	4/11/17	Scaffold	GNS	SAMEA2248199	GCA_001457855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/855/GCA_001457855.1_WRG1.2	-	WRG1.2
Coraliomargarita sp. TMED73	1986604	PRJNA385857	385857	PVC group	Verrucomicrobia	1.6778	50.1	-	NHEA01	41	1578	1517	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971927	GCA_002170475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/475/GCA_002170475.1_ASM217047v1	-	-
Acetobacter sp. DmW_043	1670658	PRJNA253128	253128	Proteobacteria	Alphaproteobacteria	2.63922	50.8	-	JOMN01	121	2385	2269	5/19/17	5/24/17	Contig	Cornell University	SAMN02866223	GCA_002153485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/485/GCA_002153485.1_ASM215348v1	-	DmW_043
Succinatimonas sp. UBA761	1947578	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.26071	36.7	-	DBKB01	180	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452388	GCA_002298455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/455/GCA_002298455.1_ASM229845v1	28894102	-
Brachyspira sp. CAG:484	1262759	PRJEB900	206911	Spirochaetes	Spirochaetia	2.19679	35.6	-	CAXV01	62	2258	2216	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138453	GCA_000431315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/315/GCA_000431315.1_MGS484	-	-
Flavobacterium enshiense DK69	1107311	PRJNA221771	221771	FCB group	Bacteroidetes/Chlorobi group	3.37526	37.7	-	JRLZ01	74	3031	2951	10/28/14	4/10/17	Contig	hzau	SAMN03078693	GCA_000769895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/895/GCA_000769895.1_ASM76989v1	26561515	DK69
Chlorobium tepidum TLS	194439	PRJNA302	302	FCB group	Bacteroidetes/Chlorobi group	2.15495	56.5	chromosome:NC_002932.3/AE006470.1	-	1	2337	2245	4/30/02	8/3/16	Complete Genome	TIGR	SAMN02604006	GCA_000006985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/006/985/GCA_000006985.1_ASM698v1	12093901	TLS
Clostridium paraputrificum	29363	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.59763	29.7	-	CYZW01	25	3516	3368	10/1/15	4/11/17	Contig	SC	SAMEA3545323	GCA_001404795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/795/GCA_001404795.1_13470_2_76	-	2789STDY5834857
Flavobacterium cauense R2A-7	1341154	PRJNA221766	221766	FCB group	Bacteroidetes/Chlorobi group	3.1109	38.2	-	JRLU01	61	2913	2841	10/28/14	4/9/17	Contig	hzau	SAMN03078688	GCA_000769815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/815/GCA_000769815.1_ASM76981v1	-	R2A-7
Sutterella sp. CAG:397	1262976	PRJEB865	206763	Proteobacteria	Betaproteobacteria	1.97767	56.9	-	CBHO01	145	1848	1804	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138630	GCA_000434855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/855/GCA_000434855.1_MGS397	-	-
Dialister sp. CAG:357	1262869	PRJEB849	206695	Terrabacteria group	Firmicutes	1.9714	48.7	-	CBHT01	146	1843	1810	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138644	GCA_000435155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/155/GCA_000435155.1_MGS357	-	-
Methanoculleus sp. MH98A	1495314	PRJNA245503	245503	Euryarchaeota	Methanomicrobia	2.54244	61.4	-	JMIO01	306	2615	2301	5/15/14	4/10/17	Contig	Agharkar Research Institute	SAMN02738432	GCA_000691865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/865/GCA_000691865.1_MethMaris1.0	-	MH98A
Roseburia sp. 499	1261634	PRJNA341691	341691	Terrabacteria group	Firmicutes	3.36066	38.2	-	MJID01	41	3267	3150	1/9/17	4/16/17	Contig	USDA-ARS	SAMN05726914	GCA_001940225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/225/GCA_001940225.1_ASM194022v1	27613689	499
Nitrosomonas cryotolerans	44575	PRJEB17435	351636	Proteobacteria	Betaproteobacteria	2.7834	43.5	-	FOXN01	100	2504	2332	10/31/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216419	GCA_900115725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/725/GCA_900115725.1_IMG-taxon_2671180136_annotated_assembly	-	Nm55
Enhydrobacter sp. UBA1586	1946455	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.06912	43.9	-	DCNW01	155	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455563	GCA_002322135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/135/GCA_002322135.1_ASM232213v1	28894102	-
Lactobacillus otakiensis DSM 19908 = JCM 15040	1423780	PRJDB1128	205903	Terrabacteria group	Firmicutes	2.34713	42.4	-	BASH01	40	2298	2211	6/19/13	4/8/17	Contig	"Institute of Genetic Resources, Faculty of Agriculture, Kyushu University"	SAMD00036749	GCA_000415925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/925/GCA_000415925.1_Lot_1.0	23929467	JCM 15040
Lactobacillus parabrevis	357278	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.66005	49	-	JQCI01	123	2455	2314	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02797792	GCA_001437515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/515/GCA_001437515.1_ASM143751v1	26415554	LMG 11984
Listeria fleischmannii subsp. fleischmannii LU2006-1	1214117	PRJNA171205	171205	Terrabacteria group	Firmicutes	2.84113	38.3	-	ALWW01	102	2908	2505	3/4/13	2/26/17	Contig	Cornell University	SAMN02415229	GCA_000344175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/175/GCA_000344175.1_ASM34417v1	23524352	LU2006-1
Aquitalea magnusonii	332411	PRJNA302577	302577	Proteobacteria	Betaproteobacteria	4.3304	60.4	-	LNQU01	600	4272	3510	1/15/16	4/11/17	Contig	Masaryk University	SAMN04275151	GCA_001515285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/285/GCA_001515285.1_ASM151528v1	26637813	CCM 7607
Shewanella colwelliana	23	PRJNA328548	328548	Proteobacteria	Gammaproteobacteria	4.64254	45.3	-	MCBT01	52	4127	3971	9/19/16	4/13/17	Scaffold	Chonnam National University	SAMN05384437	GCA_001735525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/735/525/GCA_001735525.1_ASM173552v1	-	CSB03KR
Thermococcus celer	2264	PRJNA274230	274230	Euryarchaeota	Thermococci	1.86682	56.4	chromosome:NZ_CP014854.1/CP014854.1	-	1	2024	1911	7/5/17	7/7/17	Complete Genome	Ecole Normale Superieure de Lyon	SAMN03324154	GCA_002214365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/365/GCA_002214365.1_ASM221436v1	-	Vu 13
Thermoanaerobacter thermocopriae JCM 7501	1291048	PRJDB754	243662	Terrabacteria group	Firmicutes	2.45294	34.2	-	BAZY01	78	2517	1642	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00000470	GCA_001310975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/975/GCA_001310975.1_ASM131097v1	-	JCM 7501
Burkholderia contaminans FFH2055	1423419	PRJNA203156	203156	Proteobacteria	Betaproteobacteria	8.21283	66.4	-	LASC01	8	7598	7218	5/1/15	4/10/17	Contig	University of Manitoba	SAMN02402688	GCA_000987055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/987/055/GCA_000987055.1_ASM98705v1	26251482	FFH2055
Chlorobaculum limnaeum	274537	PRJNA343781	343781	FCB group	Bacteroidetes/Chlorobi group	2.79728	56.4	chromosome:NZ_CP017305.1/CP017305.1	-	1	2582	2470	9/28/16	4/17/17	Complete Genome	Pennsylvania State University	SAMN05793943	GCA_001747405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/405/GCA_001747405.1_ASM174740v1	-	DSM 1677
Halarchaeum acidiphilum MH1-52-1	1261545	PRJDB708	203272	Euryarchaeota	Halobacteria	2.43176	66.9	-	BANO01	537	2615	1988	5/16/13	4/8/17	Contig	Japan Agency for Marine-Earth Science and Technology	SAMD00036650	GCA_000400975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/975/GCA_000400975.1_ASM40097v1	-	MH1-52-1
Morganella sp. EGD-HP17	1435146	PRJNA231101	231101	Proteobacteria	Gammaproteobacteria	3.9424	50.8	-	AZRH01	72	3790	3639	12/31/13	4/11/17	Contig	National Environmental Engineering Research Institute-CSIR	SAMN02440123	GCA_000512315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/315/GCA_000512315.2_GS_De_Novo_Assembly	-	EGD-HP17
Paenarthrobacter nicotinovorans 26Cvi1.1E	1292042	PRJNA188835	188835	Terrabacteria group	Actinobacteria	4.6843	62.8	-	AZVJ01	26	4291	4129	1/3/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02597214	GCA_000514155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/155/GCA_000514155.1_ASM51415v1	-	26Cvi1.1E
Bifidobacterium thermacidophilum subsp. porcinum	212365	PRJNA239868	239868	Terrabacteria group	Actinobacteria	2.07937	60.2	-	JGZS01	3	1615	1491	8/18/14	4/9/17	Contig	University of Parma	SAMN02673456	GCA_000741445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/445/GCA_000741445.1_Bifthe_sub.por	"2,508,549,325,107,960"	LMG 21689
Paenibacillus graminis RSA19	1333858	PRJNA202950	202950	Terrabacteria group	Firmicutes	6.98619	50.3	-	ASSG01	795	6447	5732	1/15/14	4/9/17	Contig	China Agricultural University	SAMN02597343	GCA_000520655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/655/GCA_000520655.1_s2	-	RSA19
Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505	547043	PRJDB61	279563	Terrabacteria group	Actinobacteria	2.31375	56.4	chromosome:NZ_AP012330.1/AP012330.1	-	1	1892	1759	3/24/15	4/3/17	Complete Genome	"Graduate School of Frontier Sciences, University of Tokyo"	SAMD00061045	GCA_001025215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/215/GCA_001025215.1_ASM102521v1	-	JCM 1200
Vibrio owensii	696485	PRJDB3039	271954	Proteobacteria	Gammaproteobacteria	6.06628	45.4	-	BBLB01	133	5516	5374	1/7/15	4/3/17	Scaffold	University of Miyazaki	SAMD00019129	GCA_000829635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/635/GCA_000829635.1_ASM82963v1	25527835	051011B
Rubinisphaera brasiliensis DSM 5305	756272	PRJNA47863	47863	PVC group	Planctomycetes	6.0066	56.4	chromosome:NC_015174.1/CP002546.1	-	1	4822	4718	3/1/11	9/3/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00103628	GCA_000165715.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/165/715/GCA_000165715.3_ASM16571v3	-	DSM 5305
Faecalibacterium sp. An122	1965551	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.25671	59.5	-	NFLL01	80	3054	2891	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473595	GCA_002160895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/895/GCA_002160895.1_ASM216089v1	-	An122
Thermoanaerobacterium sp. PSU-2	1930849	PRJNA359358	359358	Terrabacteria group	Firmicutes	2.55631	35.2	-	MSQD01	55	2605	2475	4/20/17	4/22/17	Contig	Thaksin University	SAMN06190135	GCA_002102475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/475/GCA_002102475.1_ASM210247v1	28337413	PSU-2
Microbispora sp. GMKU363	718014	PRJDB4245	298988	Terrabacteria group	Actinobacteria	7.82044	69.6	-	BCBX01	85	6905	6587	10/15/15	4/16/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00041432	GCA_001417795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/795/GCA_001417795.1_ASM141779v1	26659694	GMKU363
Chloroflexus aggregans DSM 9485	326427	PRJNA16708	16708	Terrabacteria group	Chloroflexi	4.68493	56.4	chromosome:NC_011831.1/CP001337.1	-	1	3869	3707	1/5/09	5/18/17	Complete Genome	US DOE Joint Genome Institute	SAMN00623036	GCA_000021945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/945/GCA_000021945.1_ASM2194v1	-	DSM 9485
Chryseobacterium oranimense G311	1300143	PRJEB1544	200915	FCB group	Bacteroidetes/Chlorobi group	4.45705	37.7	-	CDHM01	15	4188	3795	11/21/14	4/10/17	Contig	URMITE	SAMEA3137595	GCA_000820645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/645/GCA_000820645.1_PRJEB1544_assembly_1	-	G311
Pantoea sp. PSNIH2	1484157	PRJNA242850	242850	Proteobacteria	Gammaproteobacteria	4.96734	56.3884	chromosome:NZ_CP009866.1/CP009866.1; plasmid pKPC-56a:NZ_CP009867.1/CP009867.1; plasmid pPSP-100:NZ_CP009868.1/CP009868.1; plasmid pPSP-75c:NZ_CP009869.1/CP009869.1; plasmid pPSP-b98:NZ_CP009870.1/CP009870.1; plasmid pPSP-cd6:NZ_CP009871.1/CP009871.1	-	6	4828	4516	11/17/14	4/9/17	Complete Genome	NIH	SAMN02709585	GCA_000784965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/965/GCA_000784965.1_ASM78496v1	25232178	PSNIH2
Mitsuokella sp. UBA4253	1946959	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.29034	58.5	-	DGWR01	19	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451182	GCA_002395285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/285/GCA_002395285.1_ASM239528v1	28894102	-
Curtobacterium flaccumfaciens	2035	PRJNA270649	270649	Terrabacteria group	Actinobacteria	3.68442	70.9	-	JXQU01	92	3480	3380	2/9/15	4/10/17	Contig	University of Chicago	SAMN03267955	GCA_000834535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/535/GCA_000834535.1_ASM83453v1	-	MEB126
Mycoplasma meleagridis	29561	PRJNA316184	316184	Terrabacteria group	Tenericutes	0.658083	26.3	-	LVWO01	32	572	515	5/6/16	4/12/17	Contig	Pasteur Institute of Tunis	SAMN04577851	GCA_001639665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/665/GCA_001639665.1_ASM163966v1	27313300	MM26B8_IPT
Paenibacillus sp. 32O-W	1695218	PRJNA255120	255120	Terrabacteria group	Firmicutes	5.37586	56.3	chromosome:NZ_CP013653.1/CP013653.1	-	1	4844	4663	12/11/15	4/11/17	Complete Genome	Illinois Institute of Technology	SAMN02910217	GCA_001465275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/465/275/GCA_001465275.1_ASM146527v1	26868401	32O-W
Lactobacillus ingluviei DSM 15946	1423760	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.15157	49.9	-	AZFK01	88	2134	2012	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369402	GCA_001435775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/775/GCA_001435775.1_ASM143577v1	26415554	DSM 15946
Helicobacter sp. MIT 03-1614	1548147	PRJNA261711	261711	Proteobacteria	delta/epsilon subdivisions	1.94688	35.8	-	JRMS01	172	2029	1869	10/2/14	4/9/17	Contig	Massachusetts Institute of Technology	SAMN03075556	GCA_000762925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/925/GCA_000762925.1_ASM76292v1	25428971	MIT 03-1614
Maritimibacter sp. REDSEA-S28_B5	1811547	PRJNA289734	289734	Proteobacteria	Alphaproteobacteria	4.24529	64.3	-	LUOO01	122	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534590	GCA_001626765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/765/GCA_001626765.1_ASM162676v1	27377622	-
Pseudomonas pelagia	553151	PRJNA407263	407263	Proteobacteria	Gammaproteobacteria	4.5333	57.4	-	NWMT01	266	4287	4151	9/24/17	9/24/17	Contig	NCAOR	SAMN07644972	GCA_002351465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/351/465/GCA_002351465.1_ASM235146v1	-	58
Gordonibacter sp. An232A	1965593	PRJNA377666	377666	Terrabacteria group	Actinobacteria	3.49424	65.1	-	NFJO01	113	2838	2668	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473669	GCA_002159935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/935/GCA_002159935.1_ASM215993v1	-	An232A
Clostridium diolis	223919	PRJNA388138	388138	Terrabacteria group	Firmicutes	5.75649	29.7	-	NHZR01	55	5147	4860	6/8/17	6/10/17	Scaffold	Nanjing Tech University	SAMN07171604	GCA_002176895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/895/GCA_002176895.1_ASM217689v1	-	NJP7
Variovorax boronicumulans NBRC 103145	1321609	PRJDB1089	197339	Proteobacteria	Betaproteobacteria	6.72421	68.3	-	BCUS01	287	6333	5968	2/27/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046736	GCA_001591345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/345/GCA_001591345.1_ASM159134v1	-	NBRC 103145
Butyricicoccus sp. K4410.MGS-46	1828554	PRJNA312222	312222	Terrabacteria group	Firmicutes	1.8772	55.6	-	LWLH01	46	-	-	5/13/16	5/13/16	Scaffold	Mayo Clinic	SAMN04859490	GCA_001643385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/385/GCA_001643385.1_ASM164338v1	-	-
Stappia sp. 22II-S9-Z10	1317123	PRJNA196740	196740	Proteobacteria	Alphaproteobacteria	5.34342	68.5	-	AQRB01	37	4775	4667	4/12/17	4/16/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN03082094	GCA_002088295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/295/GCA_002088295.1_ASM208829v1	-	22II-S9-Z10
Phaeospirillum fulvum	1082	PRJEB15691	347446	Proteobacteria	Alphaproteobacteria	3.80506	64.7	-	FNWO01	29	3401	3236	10/27/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04244559	GCA_900108475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/475/GCA_900108475.1_IMG-taxon_2597490343_annotated_assembly	-	DSM 13234
Aurantimonas sp. 22II-16-19i	1317114	PRJNA196731	196731	Proteobacteria	Alphaproteobacteria	5.84167	67.4	-	AQQS01	100	5338	5135	4/12/17	4/16/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN03097527	GCA_002088275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/275/GCA_002088275.1_ASM208827v1	-	22II-16-19i
Bacillus firmus	1399	PRJNA277423	277423	Terrabacteria group	Firmicutes	4.71798	41.9	-	LDWQ01	136	4739	4536	6/24/15	4/10/17	Contig	University of Malaya	SAMN03751788	GCA_001038755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/755/GCA_001038755.1_ASM103875v1	-	LK28
Bacillus drentensis NBRC 102427	1314752	PRJDB1082	196455	Terrabacteria group	Firmicutes	5.15943	38.7	-	BCUX01	151	4992	4851	2/27/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046993	GCA_001591445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/445/GCA_001591445.1_ASM159144v1	-	NBRC 102427
[Clostridium] josui JCM 17888	1291050	PRJDB756	243665	Terrabacteria group	Firmicutes	4.30602	35.9	-	BBAA01	150	3966	3000	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00000459	GCA_001311015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/015/GCA_001311015.1_ASM131101v1	-	JCM 17888
Phaeobacter sp. S60	1569353	PRJNA266107	266107	Proteobacteria	Alphaproteobacteria	4.56946	60.2	-	JSWJ01	55	4439	4316	1/21/15	4/10/17	Scaffold	Technical University of Denmark	SAMN03159525	GCA_000826845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/845/GCA_000826845.1_ASM82684v1	-	S60
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854	1150460	PRJDB60	275715	Terrabacteria group	Actinobacteria	2.33723	56.3	chromosome Unknown:NZ_AP012327.1/AP012327.1	-	1	2005	1840	2/17/15	4/10/17	Complete Genome	"Graduate School of Frontier Sciences, University of Tokyo"	SAMD00061044	GCA_001042615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/615/GCA_001042615.1_ASM104261v1	25883283	JCM 15439
Plesiomonas shigelloides 302-73	1315976	PRJNA196338	196338	Proteobacteria	Gammaproteobacteria	4.08396	51.1	-	AQQO01	296	3424	3227	5/14/13	4/8/17	Scaffold	Centro Nacional de Analisis Genomico	SAMN02044791	GCA_000392595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/595/GCA_000392595.1_PleShi1.0	23814109	302-73
Cupriavidus gilardii	82541	PRJNA313373	313373	Proteobacteria	Betaproteobacteria	5.55992	67.7	-	LVXY01	28	4889	4762	6/3/16	4/12/17	Contig	King Abdullah University of Science and Technology (KAUST)	SAMN04520139	GCA_001658125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/125/GCA_001658125.1_ASM165812v1	-	JZ4
Dickeya dadantii 3937	198628	PRJNA30	30	Proteobacteria	Gammaproteobacteria	4.9228	56.3	chromosome:NC_014500.1/CP002038.1	-	1	4485	4244	9/10/10	4/7/17	Complete Genome	International Erwinia Consortium	SAMN02603422	GCA_000147055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/055/GCA_000147055.1_ASM14705v1	21217001	3937
[Clostridium] sphenoides JCM 1415	1297793	PRJDB859	243751	Terrabacteria group	Firmicutes	5.22208	43.7	-	BBDQ01	84	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000522	GCA_001312385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/385/GCA_001312385.1_ASM131238v1	-	JCM 1415
Veillonella montpellierensis DNF00314	1401067	PRJNA219664	219664	Terrabacteria group	Firmicutes	1.97684	37.1	-	JRNT01	72	1724	1633	9/26/14	4/9/17	Contig	J. Craig Venter Institute	SAMN02850965	GCA_000759285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/285/GCA_000759285.1_04_NF40_HMP872v01	-	DNF00314
Labrys sp. CB10b_03	2014536	PRJNA335650	335650	Proteobacteria	Alphaproteobacteria	3.00717	65.3	-	NJGX01	3632	-	-	7/10/17	7/10/17	Contig	Univ Estadual Paulista UNESP/FCAV	SAMN07197444	GCA_002216255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/255/GCA_002216255.1_ASM221625v1	-	-
Prevotella albensis DSM 11370 = JCM 12258	1122978	PRJDB569	243148	FCB group	Bacteroidetes/Chlorobi group	2.67472	41.3	-	BAJD01	94	2270	1861	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00012690	GCA_000613525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/525/GCA_000613525.1_ASM61352v1	-	JCM 12258
Bifidobacterium choerinum DSM 20434	1121107	PRJNA195779	195779	Terrabacteria group	Actinobacteria	2.03732	65.7	-	AXVO01	20	1655	1544	10/25/13	4/9/17	Contig	DOE Joint Genome Institute	SAMN02441446	GCA_000484675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/675/GCA_000484675.1_ASM48467v1	-	DSM 20434
Sporocytophaga myxococcoides	153721	PRJDB3065	263339	FCB group	Bacteroidetes/Chlorobi group	5.98428	36	-	BBLT01	37	4921	4814	10/7/14	4/9/17	Contig	Shandong University	SAMD00019234	GCA_000775915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/915/GCA_000775915.1_ASM77591v1	-	PG-01
Paucisalibacillus globulus	351095	PRJEB5952	242467	Terrabacteria group	Firmicutes	3.92411	36.6	-	FXXM01	23	-	-	5/27/17	9/23/17	Scaffold	URMITE	SAMEA104095917	GCA_900184735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/184/735/GCA_900184735.1_PRJEB5952	-	PG
Bifidobacterium subtile DSM 20096	1121110	PRJNA195781	195781	Terrabacteria group	Actinobacteria	2.76527	60.9	-	AUFH01	32	2290	2139	7/10/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02440843	GCA_000426405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/405/GCA_000426405.1_ASM42640v1	-	DSM 20096
Arenimonas composti TR7-09 = DSM 18010	1121013	PRJNA219511	219511	Proteobacteria	Gammaproteobacteria	3.16121	70.7	-	AWXU01	95	2888	2776	9/2/14	4/9/17	Contig	Huazhong Agricultural University	SAMN03015222	GCA_000747175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/175/GCA_000747175.1_ASM74717v1	-	TR7-09
Rhizobium leucaenae	29450	PRJNA301008	301008	Proteobacteria	Alphaproteobacteria	6.84208	59.3	-	LMZF01	163	6625	6272	6/22/16	4/13/17	Contig	LNCC	SAMN04231433	GCA_001675175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/175/GCA_001675175.1_ASM167517v1	-	CPAO 29.8
Bacillus flexus 27Col1.1E	1292043	PRJNA188836	188836	Terrabacteria group	Firmicutes	5.46038	37.7	-	AZUJ01	47	5576	5362	1/3/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02597188	GCA_000527015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/015/GCA_000527015.1_ASM52701v1	-	27Col1.1E
Butyricimonas virosa	544645	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.33179	42.3	-	DCJY01	45	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452869	GCA_002320175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/175/GCA_002320175.1_ASM232017v1	28894102	-
Streptomyces mirabilis	68239	PRJNA247517	247517	Terrabacteria group	Actinobacteria	11.4523	70.3	-	JQLE01	155	10622	9727	8/28/14	3/11/17	Scaffold	DOE Joint Genome Institute	SAMN02787054	GCA_000746395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/395/GCA_000746395.1_ASM74639v1	-	YR139
Corynebacterium crenatum	168810	PRJNA252792	252792	Terrabacteria group	Actinobacteria	3.26876	53.9	-	JPDH01	227	3131	2889	7/21/14	4/9/17	Contig	Jiangnan University	SAMN02863060	GCA_000732145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/145/GCA_000732145.1_ASM73214v1	-	SYPA 5-5
Nitrosospira sp. Nsp1	136547	PRJEB16022	348506	Proteobacteria	Betaproteobacteria	3.28197	53.3	-	FMUF01	53	3004	2846	10/17/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05720354	GCA_900100985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/985/GCA_900100985.1_IMG-taxon_2671180077_annotated_assembly	-	Nsp1
Pseudomonas veronii 1YdBTEX2	1295141	PRJNA189715	189715	Proteobacteria	Gammaproteobacteria	6.68004	60.7	-	AOUH01	63	6201	5902	4/3/13	5/19/17	Contig	Bacterial Abiotic Stress and Survival Improvement Network - BACSIN	SAMN02469887	GCA_000350565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/565/GCA_000350565.1_P.ver1YdBTEX2v.1	23682152	1YdBTEX2
Lactobacillus pobuzihii	449659	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.3407	37.7	-	JQCN01	71	2180	2073	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02797797	GCA_001438865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/865/GCA_001438865.1_ASM143886v1	26415554	NBRC 103219
Marinobacter excellens LAMA 842	1306954	PRJNA193450	193450	Proteobacteria	Gammaproteobacteria	4.37763	57.4	-	LOCO01	59	4047	3895	2/25/16	4/12/17	Scaffold	Universidade do Vale do Itajai (UNIVALI)	SAMN04297455	GCA_001574445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/445/GCA_001574445.1_ASM157444v1	-	LAMA 842
Renibacterium salmoninarum ATCC 33209	288705	PRJNA19227	19227	Terrabacteria group	Actinobacteria	3.15525	56.3	chromosome:NC_010168.1/CP000910.1	-	1	3150	2633	12/18/07	3/29/17	Complete Genome	"Northwest Fisheries Science Center, NOAA Fisheries Service"	SAMN02603684	GCA_000018885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/885/GCA_000018885.1_ASM1888v1	-	ATCC 33209
Salinisphaera sp. UBA1666	1947454	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.88876	63.3	-	DCKU01	192	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451689	GCA_002320455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/455/GCA_002320455.1_ASM232045v1	28894102	-
Pseudoalteromonas agarivorans S816	1307437	PRJNA193579	193579	Proteobacteria	Gammaproteobacteria	4.42425	40.9	-	APME01	133	4062	3853	4/11/13	5/19/17	Contig	"Department of Systems Biology, Technical University of Denmark"	SAMN02471034	GCA_000363985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/985/GCA_000363985.1_S816-1_1.0	-	S816
Comamonas sp. E6	364029	PRJDB2892	248804	Proteobacteria	Betaproteobacteria	5.57678	61.1	-	BBXH01	72	5155	4977	5/15/15	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00029743	GCA_001010305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/305/GCA_001010305.1_ASM101030v1	26089421	E6
Sulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565	1300350	PRJNA235146	235146	Proteobacteria	Alphaproteobacteria	3.5132	55.2	-	JAMC01	92	3401	3313	6/25/14	4/9/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02722720	GCA_000712275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/275/GCA_000712275.1_SOAPdenovo_v1.05	-	JCM 14565
Porphyrobacter dokdonensis	328225	PRJNA322640	322640	Proteobacteria	Alphaproteobacteria	2.99645	64.8	-	MUYI01	13	2826	2750	5/22/17	5/24/17	Contig	"Second Institute of Oceanography, State Oceanic Administration"	SAMN06251560	GCA_002155305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/305/GCA_002155305.1_ASM215530v1	-	DSM 17193
Polaribacter dokdonensis DSW-5	1300348	PRJEB16559	349833	FCB group	Bacteroidetes/Chlorobi group	3.07514	30	-	FNUE01	4	2793	2731	10/22/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444353	GCA_900106865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/865/GCA_900106865.1_IMG-taxon_2693430036_annotated_assembly	-	DSW-5
Maribacter dokdonensis	320912	PRJEB16470	349386	FCB group	Bacteroidetes/Chlorobi group	4.62254	36.1	-	FNTB01	2	3952	3853	10/22/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05192540	GCA_900105545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/545/GCA_900105545.1_IMG-taxon_2667527236_annotated_assembly	-	MAR_2009_71
Marmoricola sp. Leaf446	1736379	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.8148	73.4	-	LMRF01	9	3618	3498	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151769	GCA_001424755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/755/GCA_001424755.1_Leaf446	26633631	Leaf446
Gluconobacter thailandicus NBRC 3257	1381097	PRJDB1431	237599	Proteobacteria	Alphaproteobacteria	3.44605	56.2	-	BASM01	107	3220	3055	8/8/13	4/9/17	Contig	Yamaguchi University	SAMD00020942	GCA_000576285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/285/GCA_000576285.1_ASM57628v1	-	NBRC 3257
Caldicellulosiruptor sp. Wai35.B1	1387557	PRJNA215347	215347	Terrabacteria group	Firmicutes	2.83448	35.8	-	LACM01	1	2685	2502	3/17/15	4/10/17	Contig	DOE Joint Genome Institute	SAMN02745017	GCA_000955725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/955/725/GCA_000955725.1_ASM95572v1	25977428	Wai35.B1
Aeropyrum pernix K1	272557	PRJNA211	211	TACK group	Crenarchaeota	1.6697	56.3	chromosome:BA000002.3	-	1	1752	1700	3/28/03	10/7/16	Complete Genome	NITE	SAMD00061092	GCA_000011125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/125/GCA_000011125.1_ASM1112v1	-	K1
Photobacterium gaetbulicola	1295392	PRJNA269560	269560	Proteobacteria	Gammaproteobacteria	5.95012	49.8	-	JWLZ01	230	5230	5094	12/29/14	4/10/17	Contig	University of Malaya	SAMN03254454	GCA_000808615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/615/GCA_000808615.1_ASM80861v1	-	AD005a
Thiolapillus brandeum	1076588	PRJDA72157	72157	Proteobacteria	Gammaproteobacteria	3.15364	56.2651	chromosome:NZ_AP012273.1/AP012273.1; plasmid pTBH10:NZ_AP012274.1/AP012274.1; plasmid pTBH13:NZ_AP012275.1/AP012275.1	-	3	2999	2929	1/17/14	4/10/17	Complete Genome	Japan Agency for Marine-Earth Science and Technology	SAMD00060997	GCA_000828615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/615/GCA_000828615.1_ASM82861v1	25133584	Hiromi 1
Clostridium intestinale DSM 6191	1121320	PRJEB18257	355521	Terrabacteria group	Firmicutes	4.6006	30.1	-	FQXU01	33	4544	4396	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745941	GCA_900130055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/055/GCA_900130055.1_IMG-taxon_2585428084_annotated_assembly	-	DSM 6191
Pseudomonas denitrificans (nomen rejiciendum)	43306	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.64286	66.3	-	JUKO01	306	6423	6161	7/10/15	5/30/17	Contig	University of Washington	SAMN03198216	GCA_001067805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/805/GCA_001067805.1_ASM106780v1	26230489	994_PDEN
Methylomonas sp. DH-1	1727196	PRJNA312260	312260	Proteobacteria	Gammaproteobacteria	5.12741	56.2399	chromosome:NZ_CP014360.1/CP014360.1; plasmid unnamed:NZ_CP014361.1/CP014361.1	-	2	4634	4461	5/16/16	4/12/17	Complete Genome	KRIBB	SAMN04496853	GCA_001644685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/685/GCA_001644685.1_ASM164468v1	-	DH-1
Desulfobulbus sp. oral taxon 041 str. Dsb3	1292048	PRJNA188738	188738	Proteobacteria	delta/epsilon subdivisions	0.736505	57.9	-	APBO01	210	-	-	3/27/13	7/29/15	Contig	Oak Ridge National Laboratory	SAMN02470740	GCA_000349345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/345/GCA_000349345.1_Dsb3	23555659	Dsb3
Kocuria sp. HMSC066H03	1739337	PRJNA299987	299987	Terrabacteria group	Actinobacteria	2.77225	70.5	-	LTEY01	8	2438	2344	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477670	GCA_001812045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/045/GCA_001812045.1_ASM181204v1	-	HMSC066H03
Dietzia sp. HMSC21D01	1581054	PRJNA269823	269823	Terrabacteria group	Actinobacteria	3.5277	70.6	-	LWPP01	598	3488	3007	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436203	GCA_001815995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/995/GCA_001815995.1_ASM181599v1	-	HMSC21D01
Amycolatopsis vancoresmycina	208444	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.83765	72	-	JNYY01	82	8867	8657	7/1/14	4/9/17	Contig	University of Illinois	SAMN02645326	GCA_000716785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/785/GCA_000716785.1_ASM71678v1	-	NRRL B-24208
Pseudomonas taiwanensis SJ9	1388762	PRJNA215705	215705	Proteobacteria	Gammaproteobacteria	6.25305	61.8	-	AXUP01	736	6075	5519	12/2/13	1/8/14	Contig	Kyungpook national university	SAMN02470221	GCA_000500605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/605/GCA_000500605.1_PseudoSJ9	-	SJ9
Lactobacillus psittaci DSM 15354	1122152	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.54141	35.6	-	AZFB01	50	1370	1301	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369382	GCA_001435695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/695/GCA_001435695.1_ASM143569v1	26415554	DSM 15354
Treponema pedis str. T M1	1290998	PRJNA188672	188672	Spirochaetes	Spirochaetia	3.05478	37.1	-	AOTM01	558	2892	2421	9/6/13	4/2/17	Contig	Swedish University of Agricultural Sciences	SAMN02379484	GCA_000465015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/015/GCA_000465015.1_Treponema_pedis_T_M1	23977007	T M1
Lactobacillus harbinensis DSM 16991	1122147	PRJNA222257	222257	Terrabacteria group	Firmicutes	3.13672	53.1	-	AZFW01	164	3082	2928	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369451	GCA_001436325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/325/GCA_001436325.1_ASM143632v1	26415554	DSM 16991
Flavobacterium daejeonense	350893	PRJNA260568	260568	FCB group	Bacteroidetes/Chlorobi group	3.75556	35.1	-	JRLG01	28	3157	3053	10/22/15	4/18/17	Contig	Yonsei University	SAMN03067763	GCA_001404975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/975/GCA_001404975.1_ASM140497v1	-	RCH33
Kosakonia cowanii	208223	PRJNA361054	361054	Proteobacteria	Gammaproteobacteria	4.85732	56.2326	chromosome:NZ_CP019445.1/CP019445.1; plasmid p888-76-1:NZ_CP019446.1/CP019446.1; plasmid p888-76-2:NZ_CP019447.1/CP019447.1	-	3	4585	4332	1/30/17	4/17/17	Complete Genome	the First Affiliated Hospital of Zhejiang Chinese Medical University	SAMN06219867	GCA_001975225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/225/GCA_001975225.1_ASM197522v1	-	888-76
Halorubrum ezzemoulense DSM 17463	1121945	PRJNA383468	383468	Euryarchaeota	Halobacteria	3.60355	66.6	-	NEDJ01	155	3559	3255	4/28/17	5/3/17	Contig	"University of Sevilla, Spain"	SAMN06765717	GCA_002114285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/285/GCA_002114285.1_ASM211428v1	-	DSM 17463
Paenibacillus pinihumi DSM 23905 = JCM 16419	1122924	PRJDB844	243746	Terrabacteria group	Firmicutes	6.74347	48.5	-	BBDI01	106	6926	4781	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00000534	GCA_001312305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/305/GCA_001312305.1_ASM131230v1	-	JCM 16419
Brevundimonas naejangsanensis DSM 23858	1121125	PRJNA188849	188849	Proteobacteria	Alphaproteobacteria	3.16452	66.6	-	ATXN01	10	3061	2961	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441231	GCA_000421705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/705/GCA_000421705.1_ASM42170v1	-	DSM 23858
Bifidobacterium minimum DSM 20102	1121109	PRJNA188848	188848	Terrabacteria group	Actinobacteria	1.86732	62.7	-	ATXM01	29	1560	1447	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02440587	GCA_000421685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/685/GCA_000421685.1_ASM42168v1	-	DSM 20102
Meiothermus taiwanensis	172827	PRJNA316666	316666	Terrabacteria group	Deinococcus-Thermus	2.98802	63.4	-	LWCO01	210	2983	2504	4/18/16	4/12/17	Contig	The University of Burdwan	SAMN04589235	GCA_001623175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/175/GCA_001623175.1_ASM162317v1	-	RP
Aurantimonas coralicida	182270	PRJDB3816	300645	Proteobacteria	Alphaproteobacteria	4.60322	66.7	-	BBWN01	93	4330	4171	11/7/15	4/11/17	Contig	"Graduate School of Life Sciences, Tohoku University"	SAMD00028746	GCA_001463825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/825/GCA_001463825.1_ASM146382v1	26534993	DSM 14790
Tenacibaculum ovolyticum	104270	PRJDB4726	317562	FCB group	Bacteroidetes/Chlorobi group	4.14812	29.5	-	BDCW01	282	3788	3576	4/19/16	4/12/17	Contig	National Institute of Infectious Diseases	SAMD00050834	GCA_001641405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/405/GCA_001641405.1_ASM164140v1	-	da5A-8
Prevotella corporis	28128	PRJNA272118	272118	FCB group	Bacteroidetes/Chlorobi group	2.85951	43.9	-	LRQG01	177	2497	2258	2/2/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN03854413	GCA_001546595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/595/GCA_001546595.1_ASM154659v1	-	MJR7716
Pontibacillus marinus BH030004 = DSM 16465	1385511	PRJNA214570	214570	Terrabacteria group	Firmicutes	4.2222	38.4	-	AVPF01	186	4191	4116	11/12/14	4/9/17	Contig	Huazhong Agricultural University	SAMN03177049	GCA_000775605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/605/GCA_000775605.1_ASM77560v1	-	BH030004
Pontibacillus halophilus JSM 076056 = DSM 19796	1385510	PRJNA214568	214568	Terrabacteria group	Firmicutes	3.53224	42.9	-	AVPE01	68	3562	3487	11/12/14	4/9/17	Contig	Huazhong Agricultural University	SAMN03177050	GCA_000775595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/595/GCA_000775595.1_ASM77559v1	-	JSM 076056
Photobacterium halotolerans	265726	PRJNA260129	260129	Proteobacteria	Gammaproteobacteria	4.75803	50.9	-	JWYV01	57	4387	4227	4/15/15	4/10/17	Scaffold	National Chung Hsing University	SAMN03263086	GCA_000972145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/145/GCA_000972145.1_ASM97214v1	26044418	MELD1
Candidatus Liberibacter americanus PW_SP	1280936	PRJNA185961	185961	Proteobacteria	Alphaproteobacteria	1.17607	31.1	-	AOFG01	22	1006	925	4/2/13	4/17/17	Contig	USDA-ARS	SAMN02472060	GCA_000350385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/385/GCA_000350385.1_Velvet	23704186	PW_SP
Pedobacter glucosidilyticus	1122941	PRJNA246159	246159	FCB group	Bacteroidetes/Chlorobi group	3.87238	34.7	-	JMTN01	93	3339	3239	12/8/14	4/9/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02745950	GCA_000799115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/115/GCA_000799115.1_ASM79911v1	26566425	DD6b
Enterobacter sp. HK169	1868135	PRJNA326573	326573	Proteobacteria	Gammaproteobacteria	4.55119	56.2	chromosome:NZ_CP017087.1/CP017087.1	-	1	4383	4167	9/6/16	4/13/17	Complete Genome	Korea Research Institute of Chemical Technology	SAMN05285327	GCA_001719105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/105/GCA_001719105.1_ASM171910v1	-	HK169
Pseudomonas cannabina	86840	PRJEB15992	348270	Proteobacteria	Gammaproteobacteria	6.38831	58.5	-	FNKU01	9	6128	5451	10/20/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216597	GCA_900100365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/365/GCA_900100365.1_IMG-taxon_2667527432_annotated_assembly	-	ICMP 2823
Pseudomonas poae	200451	PRJEB16234	348976	Proteobacteria	Gammaproteobacteria	5.95024	60.4	chromosome I:NZ_LT629706.1/LT629706.1	-	1	5386	5153	10/20/16	4/13/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04490208	GCA_900103965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/965/GCA_900103965.1_IMG-taxon_2639762637_annotated_assembly	-	BS2776
Deinococcus wulumuqiensis R12	1288484	PRJNA188159	188159	Terrabacteria group	Deinococcus-Thermus	3.39078	66.3	-	APCS01	232	3283	3125	3/22/13	4/8/17	Contig	Nanjing University of Technology	SAMN02470573	GCA_000348665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/665/GCA_000348665.1_R12	23661483	R12
Roseovarius mucosus DSM 17069	1288298	PRJNA188077	188077	Proteobacteria	Alphaproteobacteria	4.24772	61.9	-	AONH01	17	3837	3790	10/24/14	10/24/14	Scaffold	Roseobacter SFB	SAMN02708827	GCA_000768555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/555/GCA_000768555.2_Rosmuc	-	DSM 17069
Aeromonas sobria	646	PRJEB7040	267811	Proteobacteria	Gammaproteobacteria	4.68367	57.6	-	CDBW01	48	4287	4096	11/24/14	4/10/17	Scaffold	UCONNMISEQ	SAMEA2752408	GCA_000820145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/145/GCA_000820145.1_PRJEB7040	-	CECT 4245
Gluconobacter oxydans	442	PRJNA326036	326036	Proteobacteria	Alphaproteobacteria	3.60642	56.2	chromosome:NZ_CP016328.1/CP016328.1	-	1	3345	3174	7/7/16	4/5/17	Complete Genome	Beijing institute of biotechnology	SAMN05257049	GCA_001680825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/825/GCA_001680825.1_ASM168082v1	-	1.637
Leifsonia sp. 466MF	1798221	PRJEB15985	348276	Terrabacteria group	Actinobacteria	4.14145	69.8	chromosome I:NZ_LT629696.1/LT629696.1	-	1	3977	3905	10/20/16	7/28/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04515684	GCA_900100265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/265/GCA_900100265.1_IMG-taxon_2639762589_annotated_assembly	-	466MF
Streptomyces canus	58343	PRJNA299229	299229	Terrabacteria group	Actinobacteria	11.5708	70.2	-	LMWU01	78	10523	9837	1/13/16	3/12/17	Scaffold	Bielefeld University	SAMN04193350	GCA_001514145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/145/GCA_001514145.1_ASM151414v1	-	DSM 40017
Brachyspira hampsonii	1287055	PRJNA324559	324559	Spirochaetes	Spirochaetia	3.18663	27.5	-	MDCO01	16	2928	2733	9/25/16	4/13/17	Contig	University of Minnesota	SAMN05520946	GCA_001746205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/205/GCA_001746205.1_ASM174620v1	-	P280/1
Peptostreptococcus sp. D1	72304	PRJEB17259	351411	Terrabacteria group	Firmicutes	2.27741	32.9	-	FONP01	37	2123	2021	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02910278	GCA_900112955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/955/GCA_900112955.1_IMG-taxon_2593339273_annotated_assembly	-	D1
Pseudonocardia autotrophica	2074	PRJNA341362	341362	Terrabacteria group	Actinobacteria	5.8301	74.2	-	MIFY01	30	5440	5239	11/25/16	4/16/17	Scaffold	Fraunhofer Institute for Interfacial Engineering and Biotechnolgy IGB	SAMN05718038	GCA_001902615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/615/GCA_001902615.1_ASM190261v1	-	DSM 43083
Serratia plymuthica	82996	PRJNA289082	289082	Proteobacteria	Gammaproteobacteria	5.43957	56.2	chromosome:NZ_CP012097.1/CP012097.1	-	1	5113	4898	6/15/16	4/5/17	Complete Genome	Graz University of Technology	SAMN03841798	GCA_001663135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/135/GCA_001663135.1_ASM166313v1	27602183	3Re4-18
Dickeya solani IPO 2222	1225786	PRJNA317288	317288	Proteobacteria	Gammaproteobacteria	4.91983	56.2	chromosome:NZ_CP015137.1/CP015137.1	-	1	4326	4122	5/16/16	4/5/17	Complete Genome	Institute for integrative biology of the cell	SAMN04604869	GCA_001644705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/705/GCA_001644705.1_ASM164470v1	-	IPO 2222
Celeribacter marinus	1397108	PRJNA280136	280136	Proteobacteria	Alphaproteobacteria	3.09671	56.2	chromosome:NZ_CP012023.1/CP012023.1	-	1	3095	2985	10/8/15	4/11/17	Complete Genome	Pukyong National University	SAMN03837864	GCA_001308265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/308/265/GCA_001308265.1_ASM130826v1	-	IMCC 12053
Streptomyces violaceoruber	1935	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.48997	72.3	-	JOCE01	170	7833	7452	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645411	GCA_000717845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/845/GCA_000717845.1_ASM71784v1	-	NRRL S-12
Streptomyces lavendulae subsp. lavendulae	58340	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.46618	72.7	-	JOEW01	357	7699	7214	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645248	GCA_000718155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/155/GCA_000718155.1_ASM71815v1	-	NRRL B-2774
Paracoccus pantotrophus J40	936051	PRJNA202355	202355	Proteobacteria	Alphaproteobacteria	4.24459	67.6	-	JAGK01	119	4173	3892	1/14/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02584949	GCA_000526615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/615/GCA_000526615.1_ASM52661v1	-	J40
Streptomyces natalensis	68242	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.18094	68.7	-	JNYF01	292	-	-	7/1/14	5/13/16	Scaffold	University of Illinois	SAMN02645306	GCA_000715765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/765/GCA_000715765.1_ASM71576v1	-	NRRL B-5314
Marinococcus halophilus	1371	PRJEB19419	374697	Terrabacteria group	Firmicutes	3.26625	47.2	-	FVZD01	6	3293	3199	3/10/17	3/18/17	Contig	URMITE	SAMEA88386418	GCA_900166605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/605/GCA_900166605.1_PRJEB19419	-	Marseille-P3459
Trueperella pyogenes	1661	PRJNA267549	267549	Terrabacteria group	Actinobacteria	1.924	55.8	-	JVLH01	14	1697	1619	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197521	GCA_001070855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/855/GCA_001070855.1_ASM107085v1	26230489	331_TPYO
Staphylococcus pasteuri	45972	PRJNA275684	275684	Terrabacteria group	Firmicutes	2.56246	31.5	-	LAKF01	38	2506	2370	4/27/15	4/10/17	Contig	Institute of Microbial Technology	SAMN03352180	GCA_000981155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/155/GCA_000981155.1_ASM98115v1	-	BAB3
Gordonia westfalica JCM 11757	1305624	PRJDB957	245271	Terrabacteria group	Actinobacteria	4.4427	66.5	-	BBGN01	2693	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016924	GCA_001313785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/785/GCA_001313785.1_ASM131378v1	-	JCM 11757
Mycobacterium celatum	28045	PRJNA299467	299467	Terrabacteria group	Actinobacteria	4.72068	67	-	LQOM01	57	4549	4358	4/20/17	4/22/17	Contig	University of Trento	SAMN04216916	GCA_002101595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/595/GCA_002101595.1_ASM210159v1	-	DSM 44243
Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043	566552	PRJDB58	279562	Terrabacteria group	Actinobacteria	2.07952	56.2	chromosome:NZ_AP012325.1/AP012325.1	-	1	1760	1628	3/24/15	4/10/17	Complete Genome	"Graduate School of Frontier Sciences, University of Tokyo"	SAMD00061042	GCA_001025195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/195/GCA_001025195.1_ASM102519v1	-	JCM 1194
Brevibacillus borstelensis 3096-7	1444309	PRJNA233554	233554	Terrabacteria group	Firmicutes	5.4642	51.4	-	JAQG01	192	5359	5144	4/2/14	4/9/17	Contig	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN02592614	GCA_000612185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/185/GCA_000612185.1_BreBor1.0	-	3096-7
Micrococcus sp. HMSC31B01	1581073	PRJNA269842	269842	Terrabacteria group	Actinobacteria	2.38046	72.4	-	LWPL01	679	2383	1954	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436263	GCA_001816085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/085/GCA_001816085.1_ASM181608v1	-	HMSC31B01
Serratia plymuthica S13	1348660	PRJNA209109	209109	Proteobacteria	Gammaproteobacteria	5.46731	56.2	chromosome:NC_021659.1/CP006566.1	-	1	5144	4936	7/5/13	4/1/17	Complete Genome	Graz University of Technology	SAMN02603297	GCA_000438825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/825/GCA_000438825.1_ASM43882v1	23929484	-
Sulfolobus sp. JCM 16833	1294262	PRJDB820	243729	TACK group	Crenarchaeota	2.51946	42.3	-	BBCL01	74	2684	2149	10/1/15	4/17/17	Contig	The University of Tokyo	SAMD00000537	GCA_001316085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/085/GCA_001316085.1_ASM131608v1	-	JCM 16833
Sphaerotilus natans	34103	PRJEB18891	360758	Proteobacteria	Betaproteobacteria	4.63008	69.9	-	FTMZ01	57	4156	4003	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421778	GCA_900156335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/335/GCA_900156335.1_IMG-taxon_2681812894_annotated_assembly	-	ATCC 13338
Haloarcula sp. CBA1128	1765056	PRJDB4414	305502	Euryarchaeota	Halobacteria	4.18459	61.9	-	BCNA01	6	4102	3947	12/23/15	3/22/17	Contig	Korea Basic Science Institute	SAMD00043970	GCA_001485555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/555/GCA_001485555.1_ASM148555v1	-	CBA1128
Eggerthella sp. YY7918	502558	PRJDA67615	67615	Terrabacteria group	Actinobacteria	3.12367	56.2	chromosome:NC_015738.1/AP012211.1	-	1	2660	2573	7/1/11	4/17/17	Complete Genome	"Gifu University, United Graduate School of Agricultural Science"	SAMD00060993	GCA_000270285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/285/GCA_000270285.1_ASM27028v1	21914883	YY7918
Haloferax larsenii	302484	PRJEB16866	351016	Euryarchaeota	Halobacteria	3.89408	61.6	-	FOAD01	24	3903	3748	10/29/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488691	GCA_900109695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/695/GCA_900109695.1_IMG-taxon_2639762639_annotated_assembly	-	CDM_5
Haloferax gibbonsii ATCC 33959	1227459	PRJNA174903	174903	Euryarchaeota	Halobacteria	4.05732	65.9	-	AOLJ01	30	4003	3848	2/4/13	4/8/17	Contig	"University of California, Davis"	SAMN02471685	GCA_000336775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/775/GCA_000336775.1_ASM33677v1	25393412	ATCC 33959
Lysobacter sp. Root559	1736559	PRJNA297942	297942	Proteobacteria	Gammaproteobacteria	4.42492	68.3	-	LMGE01	18	3934	3816	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155828	GCA_001427065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/065/GCA_001427065.1_Root559	26633631	Root559
Ensifer sp. WSM1721	1041159	PRJNA209495	209495	Proteobacteria	Alphaproteobacteria	6.29218	61.8	-	AZUW01	68	6039	5683	1/3/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02597201	GCA_000513895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/895/GCA_000513895.1_ASM51389v1	-	WSM1721
Halorubrum distributum JCM 10118	1227468	PRJNA174915	174915	Euryarchaeota	Halobacteria	3.30613	68.1	-	AOJN01	68	3215	3083	2/4/13	3/29/17	Contig	"University of California, Davis"	SAMN02471649	GCA_000337335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/335/GCA_000337335.1_ASM33733v1	25393412	JCM 10118
Haloferax alexandrinus JCM 10717	1227458	PRJNA174901	174901	Euryarchaeota	Halobacteria	3.64926	66.3	-	AOLL01	36	3667	3530	2/4/13	4/8/17	Contig	"University of California, Davis"	SAMN02471657	GCA_000336735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/735/GCA_000336735.1_ASM33673v1	25393412	JCM 10717
Halorubrum saccharovorum	2248	PRJNA248778	248778	Euryarchaeota	Halobacteria	3.28237	66.5	-	JNFH02	189	3315	2256	6/10/14	3/29/17	Contig	THE INSTITUTE OF CYTOLOGY AND GENETICS	SAMN02803665	GCA_000700025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/025/GCA_000700025.2_ASM70002v2	26044423	H3
Pseudomonas thermotolerans J53	935867	PRJNA210336	210336	Proteobacteria	Gammaproteobacteria	3.75331	67	-	AZUT01	62	3574	3383	1/3/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02597198	GCA_000513835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/835/GCA_000513835.1_ASM51383v1	-	J53
Pseudomonas extremorientalis	169669	PRJNA338696	338696	Proteobacteria	Gammaproteobacteria	6.34561	60.9	-	MDGK01	63	5776	5611	11/7/16	4/13/17	Contig	Ottawa Research and Development Center	SAMN05561041	GCA_001870465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/465/GCA_001870465.1_ASM187046v1	-	LMG 19695
Anaerovibrio lipolyticus LB2005	1408423	PRJNA223047	223047	Terrabacteria group	Firmicutes	2.68273	43.3	-	JHYA01	31	2535	2424	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02744001	GCA_000621545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/545/GCA_000621545.1_ASM62154v1	-	LB2005
Pannonibacter phragmitetus DSM 14782	1122929	PRJNA187116	187116	Proteobacteria	Alphaproteobacteria	4.78376	63.1	-	ARNQ01	40	4262	4133	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441652	GCA_000382365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/365/GCA_000382365.1_ASM38236v1	-	DSM 14782
Natrinema altunense JCM 12890	1227494	PRJNA174934	174934	Euryarchaeota	Halobacteria	3.77497	64.5	-	AOIK01	52	3753	3562	2/4/13	4/8/17	Contig	"University of California, Davis"	SAMN02471672	GCA_000337155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/155/GCA_000337155.1_ASM33715v1	25393412	JCM 12890
Mycobacterium caprae	115862	PRJEB7271	278028	Terrabacteria group	Actinobacteria	4.28887	65.5	-	CDHG01	59	4251	3951	3/20/15	4/11/17	Scaffold	ERA7	SAMEA2794673	GCA_001369315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/369/315/GCA_001369315.1_Genome_assembly_of_M_bovis_MB2	-	MB2
Saccharopolyspora rectivirgula	28042	PRJNA252549	252549	Terrabacteria group	Actinobacteria	3.96147	68.9	-	JNVU01	50	3684	3539	6/23/14	4/9/17	Contig	University of Franche-Comte	SAMN02851309	GCA_000710755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/755/GCA_000710755.1_ASM71075v1	25523783	DSM 43113
Lachnospira multipara MC2003	1410662	PRJNA223474	223474	Terrabacteria group	Firmicutes	2.60643	33.3	-	JHWY01	26	2357	2253	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02744017	GCA_000621945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/945/GCA_000621945.1_ASM62194v1	-	MC2003
Pseudacidovorax intermedius NH-1	1257078	PRJNA179323	179323	Proteobacteria	Betaproteobacteria	5.52111	68.9	-	ANOY02	1567	5605	4674	1/25/13	4/8/17	Contig	China Agricultural University	SAMN02469492	GCA_000333675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/675/GCA_000333675.2_Pseudacidovorax_intermedius_NH-1	-	NH-1
Rhodopseudomonas sp. B29	95607	PRJDA69969	69969	Proteobacteria	Alphaproteobacteria	5.51681	65	-	BADD01	802	5457	4554	12/26/12	5/19/17	Scaffold	Kazusa DNA Research Institute	SAMD00036574	GCA_000333455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/455/GCA_000333455.1_ASM33345v1	-	B29
Treponema bryantii	163	PRJEB17004	351165	Spirochaetes	Spirochaetia	3.43258	38.4	-	FOFU01	27	3094	2993	10/29/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487977	GCA_900111035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/035/GCA_900111035.1_IMG-taxon_2623620477_annotated_assembly	-	B25
Blautia wexlerae	418240	PRJEB10915	297013	Terrabacteria group	Firmicutes	4.82903	41.2	-	CZAW01	195	4621	4238	10/1/15	4/11/17	Contig	SC	SAMEA3545374	GCA_001404735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/735/GCA_001404735.1_14207_7_34	-	2789STDY5834911
Pseudobutyrivibrio ruminis CF1b	1280688	PRJNA185685	185685	Terrabacteria group	Firmicutes	3.27113	39.5	-	AUJB01	16	2960	2873	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440829	GCA_000424005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/005/GCA_000424005.1_ASM42400v1	-	CF1b
Desulfococcus oleovorans Hxd3	96561	PRJNA18007	18007	Proteobacteria	delta/epsilon subdivisions	3.94417	56.2	chromosome:NC_009943.1/CP000859.1	-	1	3393	3325	10/19/07	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00623035	GCA_000018405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/405/GCA_000018405.1_ASM1840v1	-	Hxd3
Butyrivibrio sp. XPD2002	1280665	PRJNA185680	185680	Terrabacteria group	Firmicutes	4.44296	41.8	-	AUIY01	47	3972	3821	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440664	GCA_000423945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/945/GCA_000423945.1_ASM42394v1	-	XPD2002
Gluconobacter oxydans H24	1224746	PRJNA173388	173388	Proteobacteria	Alphaproteobacteria	3.81623	56.1944	chromosome:NC_019396.1/CP003926.1; plasmid unnamed:NC_019397.1/CP003927.1	-	2	3579	3387	11/8/12	3/31/17	Complete Genome	Beijing institute of biotechnology	SAMN02603014	GCA_000311765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/765/GCA_000311765.1_ASM31176v1	23472221	H24
Lysobacter defluvii IMMIB APB-9 = DSM 18482	1385515	PRJNA214578	214578	Proteobacteria	Gammaproteobacteria	2.69139	70.2	-	AVBH01	472	2677	2370	10/29/14	4/9/17	Contig	State Key Laboratory of Agricultural University	SAMN02665301	GCA_000769985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/985/GCA_000769985.1_ASM76998v1	-	IMMIB APB-9
Legionella moravica	39962	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	3.77377	40.1	-	LNYN01	44	3241	3074	12/15/15	4/11/17	Scaffold	Tel Aviv University	SAMN04274785	GCA_001467865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/865/GCA_001467865.1_ASM146786v1	26752266	ATCC 43877
Sporomusa ovata DSM 2662	1123288	PRJNA185663	185663	Terrabacteria group	Firmicutes	5.22197	43.3	-	AUIL01	108	5079	4748	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441157	GCA_000423685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/685/GCA_000423685.1_ASM42368v1	-	DSM 2662
Lachnobacterium bovis C6A12	1410660	PRJNA223489	223489	Terrabacteria group	Firmicutes	2.60765	30.9	-	JHWP01	45	2426	2277	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02744025	GCA_000622065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/065/GCA_000622065.1_ASM62206v1	-	C6A12
Pseudorhodobacter ferrugineus	77008	PRJNA286976	286976	Proteobacteria	Alphaproteobacteria	3.43318	58.5	-	LGHV01	46	3445	3230	8/4/15	4/10/17	Contig	Korea Polar Research Institute	SAMN03785588	GCA_001202045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/045/GCA_001202045.1_ASM120204v1	-	LMG 22047
Lactobacillus ceti DSM 22408	1122146	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.39781	33.7	-	JQBZ01	26	1324	1251	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02797784	GCA_001438785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/785/GCA_001438785.1_ASM143878v1	26415554	DSM 22408
Nesiotobacter exalbescens	197461	PRJNA316646	316646	Proteobacteria	Alphaproteobacteria	4.17255	55.1	-	LVVZ01	52	3773	3660	12/16/16	4/16/17	Contig	"Agricultural Culture Collection of China (ACCC), Institute of Agricultural Resources and Regional Planning"	SAMN04589125	GCA_001907205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/205/GCA_001907205.1_ASM190720v1	-	WB1-6
Bifidobacterium tsurumiense DSM 17777	1121112	PRJNA185562	185562	Terrabacteria group	Actinobacteria	2.16654	52.9	-	AUCL01	26	1743	1643	7/15/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440869	GCA_000429745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/745/GCA_000429745.1_ASM42974v1	-	DSM 17777
Inquilinus limosus	171674	PRJNA361599	361599	Proteobacteria	Alphaproteobacteria	7.68833	69.9	-	NHON01	233	7213	6952	6/15/17	6/19/17	Scaffold	CONICET-CINDEFI- La Plata	SAMN06235018	GCA_002195995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/995/GCA_002195995.1_ASM219599v1	-	I
Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790	1121898	PRJNA221770	221770	FCB group	Bacteroidetes/Chlorobi group	4.63717	41.6	-	JRLY01	80	4063	3981	10/28/14	4/9/17	Contig	hzau	SAMN03078692	GCA_000769935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/935/GCA_000769935.1_ASM76993v1	-	WB 4.1-42
Flavobacterium suncheonense GH29-5 = DSM 17707	1121899	PRJNA221768	221768	FCB group	Bacteroidetes/Chlorobi group	2.88378	40.5	-	JRLW01	105	2756	2681	10/28/14	4/9/17	Contig	hzau	SAMN03078690	GCA_000769835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/835/GCA_000769835.1_ASM76983v1	-	GH29-5
Bifidobacterium magnum DSM 20222	1121108	PRJNA185561	185561	Terrabacteria group	Actinobacteria	1.82526	58.7	-	ATVE01	22	1569	1476	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441586	GCA_000420565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/565/GCA_000420565.1_ASM42056v1	-	DSM 20222
Azonexus hydrophilus	418702	PRJNA345295	345295	Proteobacteria	Betaproteobacteria	3.59652	61.8	-	MTHD01	17	3465	3373	1/18/17	6/20/17	Contig	University of Huddersfield	SAMN05860622	GCA_001956855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/855/GCA_001956855.1_ASM195685v1	-	ZS02
Arenimonas oryziterrae DSM 21050 = YC6267	1121015	PRJNA214576	214576	Proteobacteria	Gammaproteobacteria	3.09301	65.7	-	AVCI01	45	2915	2848	9/2/14	4/9/17	Contig	Huazhong Agricultural University	SAMN03015265	GCA_000747135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/135/GCA_000747135.1_ASM74713v1	-	YC6267
Alloscardovia omnicolens F0580	1321816	PRJNA198880	198880	Terrabacteria group	Actinobacteria	1.79187	46.6	-	AWSI01	16	1536	1440	9/11/13	4/2/17	Scaffold	Washington University	SAMN02436720	GCA_000466365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/365/GCA_000466365.1_ASM46636v1	-	F0580
Algoriphagus marincola HL-49	1305737	PRJNA195769	195769	FCB group	Bacteroidetes/Chlorobi group	4.18254	42.2	-	JAFX01	1	3792	3674	1/14/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02584932	GCA_000526355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/355/GCA_000526355.1_ASM52635v1	-	HL-49
Desulfovibrio gigas DSM 1382 = ATCC 19364	1121448	PRJNA185533	185533	Proteobacteria	delta/epsilon subdivisions	3.78823	63.7	-	AUBO01	84	3376	3240	7/15/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440613	GCA_000429285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/285/GCA_000429285.1_ASM42928v1	-	DSM 1382
Corynebacterium callunae DSM 20147	1121353	PRJNA185570	185570	Terrabacteria group	Actinobacteria	2.88511	52.5	-	ATVF01	26	2709	2557	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441249	GCA_000420585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/585/GCA_000420585.1_ASM42058v1	-	DSM 20147
Actinoalloteichus cyanogriseus DSM 43889	1120930	PRJNA185526	185526	Terrabacteria group	Actinobacteria	5.96896	72.5	-	AUBJ01	52	4929	4738	7/15/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441196	GCA_000429185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/185/GCA_000429185.1_ASM42918v1	-	DSM 43889
Streptomyces rimosus subsp. rimosus ATCC 10970	1265868	PRJNA182749	182749	Terrabacteria group	Actinobacteria	9.50137	71.9	-	ANSJ01	453	8534	7843	1/8/13	5/19/17	Contig	University of Strathclyde	SAMN02471950	GCA_000331185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/185/GCA_000331185.1_ASM33118v1	-	ATCC 10970
Ochrobactrum anthropi ATCC 49188	439375	PRJNA19485	19485	Proteobacteria	Alphaproteobacteria	5.20578	56.1453	chromosome 1:NC_009667.1/CP000758.1; chromosome 2:NC_009668.1/CP000759.1; plasmid pOANT01:NC_009669.1/CP000760.1; plasmid pOANT02:NC_009670.1/CP000761.1; plasmid pOANT03:NC_009671.1/CP000762.1; plasmid pOANT04:NC_009672.1/CP000763.1	-	6	5087	4870	7/12/07	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598421	GCA_000017405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/405/GCA_000017405.1_ASM1740v1	21685287	ATCC 49188
Weissella halotolerans DSM 20190	1123500	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.36607	43.1	-	JQAX01	12	1364	1290	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02797799	GCA_001436865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/865/GCA_001436865.1_ASM143686v1	26415554	DSM 20190
Rhodococcus qingshengii BKS 20-40	1278077	PRJNA185383	185383	Terrabacteria group	Actinobacteria	6.60162	62.4	-	AODN01	104	6198	6015	2/25/13	5/19/17	Contig	"Institute of Microbial Technology (IMTECH), Chandigarh, India 160036"	SAMN02469985	GCA_000341815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/815/GCA_000341815.1_Whole_genome_assembly	23538906	BKS 20-40
Desulfovibrio hydrothermalis AM13 = DSM 14728	1121451	PRJNA188881	188881	Proteobacteria	delta/epsilon subdivisions	3.65922	45.1	-	AUDB01	31	3283	3171	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440858	GCA_000425245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/245/GCA_000425245.1_ASM42524v1	-	DSM 14728
Sulfuricella denitrificans skB26	1163617	PRJDB82	170011	Proteobacteria	Betaproteobacteria	3.21721	56.1162	chromosome:NC_022357.1/AP013066.1; plasmid pSCD:NC_022358.1/AP013067.1	-	2	3112	3016	6/5/13	4/17/17	Complete Genome	Institute of Low Temperature Science	SAMD00061061	GCA_000297055.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/055/GCA_000297055.2_ASM29705v2	"2,277,364,425,017,290"	skB26
Raoultella terrigena	577	PRJNA369176	369176	Proteobacteria	Gammaproteobacteria	5.81311	57.5	-	MUBF01	41	5599	5350	1/31/17	4/17/17	Contig	Massey University	SAMN06279143	GCA_001975865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/865/GCA_001975865.1_ASM197586v1	-	NZ133
Brachybacterium alimentarium	47845	PRJNA387187	387187	Terrabacteria group	Actinobacteria	3.98272	70.2	-	NRGS01	67	3479	3338	9/21/17	9/23/17	Scaffold	"Dutton Lab, UCSD"	SAMN07141162	GCA_002332425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/425/GCA_002332425.1_ASM233242v1	28644126	908_11
Lactobacillus crustorum	392416	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.2357	35.1	-	JQCK01	87	2152	2054	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02797794	GCA_001438825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/825/GCA_001438825.1_ASM143882v1	26415554	LMG 23699
Serratia plymuthica	82996	PRJNA289082	289082	Proteobacteria	Gammaproteobacteria	5.54604	56.1	chromosome:NZ_CP012096.1/CP012096.1	-	1	5240	5024	6/15/16	4/5/17	Complete Genome	Graz University of Technology	SAMN03841799	GCA_001663115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/115/GCA_001663115.1_ASM166311v1	27602183	3Rp8
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.78766	58.8	-	JXYG01	93	4587	4447	4/1/15	4/3/17	Contig	Technical University of Denmark	SAMN03323961	GCA_000967745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/745/GCA_000967745.1_S1942	25879706	S1942
Pseudomonas lundensis	86185	PRJNA397499	397499	Proteobacteria	Gammaproteobacteria	5.01627	58.7	-	NQKG01	87	4625	4413	8/24/17	8/27/17	Contig	CSIRO Agriculture and Food	SAMN07459816	GCA_002269085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/085/GCA_002269085.1_ASM226908v1	-	L1814
Stenotrophomonas rhizophila	216778	PRJNA244760	244760	Proteobacteria	Gammaproteobacteria	4.64898	67.3	chromosome:NZ_CP007597.1/CP007597.1	-	1	4085	3964	5/1/14	4/9/17	Chromosome	Graz University of Technology	SAMN02727981	GCA_000661955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/955/GCA_000661955.1_ASM66195v1	-	DSM14405
Kocuria varians	1272	PRJEB9946	310449	Terrabacteria group	Actinobacteria	2.90045	70.5	-	CZJX01	95	2563	2380	2/2/16	4/12/17	Contig	Universitetsparken 15	SAMEA3489748	GCA_900014985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/985/GCA_900014985.1_Draft_genome_of_Kocuria_varians_G6	-	G6
Providencia heimbachae ATCC 35613	1354272	PRJNA210924	210924	Proteobacteria	Gammaproteobacteria	4.206	40.2	-	LXEW01	74	3851	3733	6/2/16	4/12/17	Contig	UW-GEL (University of Wisconsin - Genome Evolution Laboratory)	SAMN04875434	GCA_001655055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/055/GCA_001655055.1_Phe35613_DRAFTv1	-	ATCC 35613
Bacillus galactosidilyticus	217031	PRJNA286142	286142	Terrabacteria group	Firmicutes	5.18634	37.5	-	LGPB01	144	5029	2458	11/4/15	11/4/15	Scaffold	University of Guelph	SAMN03771353	GCA_001431185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/185/GCA_001431185.1_ASM143118v1	-	PL133
Hyphomonadaceae bacterium UKL13-1	1690484	PRJNA312233	312233	Proteobacteria	Alphaproteobacteria	3.50151	56.1	chromosome:CP012156.1	-	1	3255	2934	3/30/16	3/30/16	Complete Genome	Oregon State University	SAMN03894414	GCA_001602435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/435/GCA_001602435.1_ASM160243v1	-	-
Microbacterium foliorum	104336	PRJNA361268	361268	Terrabacteria group	Actinobacteria	3.74406	67.9	chromosome:NZ_CP019892.1/CP019892.1	-	1	3624	3533	3/10/17	3/13/17	Chromosome	University of Toronto-Scarborough	SAMN06392749	GCA_002024885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/885/GCA_002024885.1_ASM202488v1	-	122
Marinilactibacillus psychrotolerans 42ea	1255609	PRJEB19173	374432	Terrabacteria group	Firmicutes	2.45004	34.8	-	FUKW01	174	2311	2224	2/11/17	5/31/17	Contig	MICALIS	SAMEA81151168	GCA_900163775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/775/GCA_900163775.1_ASM90016377v1	-	42ea
Proteus hauseri ATCC 700826	1354271	PRJNA210923	210923	Proteobacteria	Gammaproteobacteria	3.78351	37.4	-	LXEV01	56	3435	3262	6/2/16	4/12/17	Contig	UW-GEL (University of Wisconsin - Genome Evolution Laboratory)	SAMN04875433	GCA_001654965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/654/965/GCA_001654965.1_Pha700826_DRAFTv1	-	ATCC 700826
Leucobacter sp. PH1c	1397278	PRJNA226215	226215	Terrabacteria group	Actinobacteria	3.12328	71.3	-	AYMV01	73	2748	2651	4/18/14	4/9/17	Contig	University of Malaya	SAMN02729858	GCA_000633415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/415/GCA_000633415.1_de_novo	-	PH1c
Bifidobacterium kashiwanohense PV20-2	1447716	PRJNA234365	234365	Terrabacteria group	Actinobacteria	2.37098	56.1	chromosome:NZ_CP007456.1/CP007456.1	-	1	2033	1876	12/9/14	4/9/17	Complete Genome	ETH Zurich	SAMN03253090	GCA_000800455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/455/GCA_000800455.1_ASM80045v1	25614572	PV20-2
Enterobacter asburiae L1	1421338	PRJNA243408	243408	Proteobacteria	Gammaproteobacteria	4.56191	56.1	chromosome:NZ_CP007546.1/CP007546.1	-	1	4426	4236	4/15/14	4/2/17	Complete Genome	University of Malaya	SAMN02716203	GCA_000632395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/395/GCA_000632395.1_ASM63239v1	-	L1
Hafnia paralvei	546367	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.74583	48	-	JWBZ01	211	4334	4185	7/10/15	4/10/17	Contig	University of Washington	SAMN03197087	GCA_001061055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/055/GCA_001061055.1_ASM106105v1	26230489	1133_RAQU
Exiguobacterium acetylicum	41170	PRJNA287868	287868	Terrabacteria group	Firmicutes	3.18572	47.2	-	LFQN01	54	3272	3201	8/5/15	4/10/17	Contig	University of Malaya	SAMN03793175	GCA_001238385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/385/GCA_001238385.1_ASM123838v1	-	ZBG2
Morganella psychrotolerans	368603	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.36966	47.9	-	LZEX01	46	4216	3862	6/24/16	4/13/17	Contig	FDA/CFSAN	SAMN04507557	GCA_001676055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/055/GCA_001676055.1_ASM167605v1	-	GCSL-Mp3
Candidatus Sodalis pierantonius str. SOPE	2342	PRJNA34865	34865	Proteobacteria	Gammaproteobacteria	4.51314	56.1	chromosome:NZ_CP006568.1/CP006568.1	-	1	4574	3153	1/10/14	4/9/17	Complete Genome	"University of Utah, Department of Biology"	SAMN02641641	GCA_000517405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/405/GCA_000517405.1_ASM51740v1	24407854	SOPE
Acinetobacter gerneri MTCC 9824	1330037	PRJNA201032	201032	Proteobacteria	Gammaproteobacteria	4.42097	37.7	-	ASYY01	167	4161	4001	7/16/13	4/6/17	Contig	Institute of Microbial Technology	SAMN02470001	GCA_000430245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/245/GCA_000430245.1_Acinetobacter_gerneri	-	MTCC 9824
Mycoplasma sp. HU2014	1664275	PRJNA286079	286079	Terrabacteria group	Tenericutes	1.08493	25.4	-	LFYS01	75	1054	844	8/4/15	4/10/17	Scaffold	University of Missouri - Columbia	SAMN03764574	GCA_001199495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/495/GCA_001199495.1_ASM119949v1	26383655	HU2014
Aeromonas diversa CDC 2478-85	1268237	PRJEB7026	267797	Proteobacteria	Gammaproteobacteria	4.06251	61.6	-	CDCE01	37	3855	3657	11/24/14	4/10/17	Scaffold	UCONNMISEQ	SAMEA2752422	GCA_000819805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/805/GCA_000819805.1_PRJEB7026	-	CECT 4254
Acinetobacter guillouiae CIP 63.46	1217655	PRJNA183319	183319	Proteobacteria	Gammaproteobacteria	4.90228	38.2	-	APOS01	16	4675	4487	4/16/13	5/18/17	Scaffold	Broad Institute	SAMN01828179	GCA_000368145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/145/GCA_000368145.1_Acin_guil_CIP_63_46_V1	-	CIP 63.46
Thermococcus sp. 4557	1042877	PRJNA67883	67883	Euryarchaeota	Thermococci	2.01132	56.1	chromosome:NC_015865.1/CP002920.1	-	1	2151	2085	7/22/11	4/17/17	Complete Genome	"Key Laboratory of Marine Biogenetic Resources, Third Institute of Oceanography, State Oceanic Administration (SOA),PR China"	SAMN02603471	GCA_000221185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/185/GCA_000221185.1_ASM22118v1	21914870	4557
Salinivibrio costicola subsp. alcaliphilus	272773	PRJNA368812	368812	Proteobacteria	Gammaproteobacteria	3.38166	49.3	-	MUFR01	248	3078	2931	2/14/17	5/9/17	Contig	Universidad de Sevilla	SAMN06273039	GCA_001996185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/185/GCA_001996185.1_ASM199618v1	-	DSM 16359
Acinetobacter gyllenbergii	134534	PRJNA263571	263571	Proteobacteria	Gammaproteobacteria	4.28491	41	-	JRVA01	25	4120	3959	7/8/16	4/6/17	Scaffold	Chinese Academy of Tropical Agricultural Science	SAMN03104007	GCA_001682515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/515/GCA_001682515.1_ASM168251v1	-	FMP01
Acinetobacter indicus ANC 4215	1217660	PRJNA183294	183294	Proteobacteria	Gammaproteobacteria	3.18669	45.4	-	ATGH01	11	3060	2856	6/21/13	4/10/17	Scaffold	Broad Institute	SAMN01087855	GCA_000413875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/875/GCA_000413875.1_Acin_indi_ANC_4215_V1	-	ANC 4215
Acinetobacter brisouii ANC 4119	1217652	PRJNA183292	183292	Proteobacteria	Gammaproteobacteria	3.14664	41.8	-	APPR01	8	2989	2866	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01087848	GCA_000368645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/645/GCA_000368645.1_Acin_bris_ANC_4119_V1	-	ANC 4119
Acinetobacter soli CIP 110264	1217676	PRJNA183289	183289	Proteobacteria	Gammaproteobacteria	3.35999	43.2	-	APPU01	9	3174	3050	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01087844	GCA_000368705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/705/GCA_000368705.1_Acin_soli_CIP_110264_V1	-	CIP 110264
Acinetobacter towneri DSM 14962 = CIP 107472	1120929	PRJNA221010	221010	Proteobacteria	Gammaproteobacteria	2.85249	41.2	-	JHZH01	93	2817	2608	4/8/14	4/6/17	Contig	DOE Joint Genome Institute	SAMN02743902	GCA_000688495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/495/GCA_000688495.1_ASM68849v1	-	DSM 14962
Acinetobacter rudis CIP 110305	421052	PRJNA183283	183283	Proteobacteria	Gammaproteobacteria	4.06669	39.2	-	ATGI01	11	3674	3503	6/21/13	4/10/17	Scaffold	Broad Institute	SAMN01087851	GCA_000413895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/895/GCA_000413895.1_Acin_rudi_CIP_110305_V1	-	CIP 110305
Acinetobacter beijerinckii ANC 3835	1217649	PRJNA183272	183272	Proteobacteria	Gammaproteobacteria	3.54768	38.3	-	APQK01	6	3378	3219	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01087843	GCA_000368985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/985/GCA_000368985.1_Acin_beij_ANC_3835_V1	-	ANC 3835
Acinetobacter tandoii DSM 14970 = CIP 107469	1120927	PRJNA221011	221011	Proteobacteria	Gammaproteobacteria	4.04824	40	-	JHZG01	87	3983	3757	4/8/14	4/6/17	Scaffold	DOE Joint Genome Institute	SAMN02743973	GCA_000621065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/065/GCA_000621065.1_ASM62106v1	-	DSM 14970
Lactococcus raffinolactis 4877	1215915	PRJEB218	183094	Terrabacteria group	Firmicutes	2.28076	38.7	-	CALL01	127	2409	2070	7/31/12	4/8/17	Scaffold	INRA-MIG	SAMEA2272463	GCA_000327305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/305/GCA_000327305.1_ASM32730v1	-	4877
Streptococcus oralis subsp. tigurinus	1077464	PRJNA274768	274768	Terrabacteria group	Firmicutes	1.83533	41.2	-	JYGU01	10	1909	1755	3/23/15	4/18/17	Contig	University at Buffalo	SAMN03334904	GCA_000960105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/105/GCA_000960105.1_ASM96010v1	25999552	UC5873
Nitrosospira briensis	35799	PRJEB17140	351390	Proteobacteria	Betaproteobacteria	3.23368	53.7	-	FOVJ01	20	2897	2774	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216386	GCA_900115125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/125/GCA_900115125.1_IMG-taxon_2675903144_annotated_assembly	-	Nsp8
Mycobacterium neoaurum	1795	PRJEB1060	182918	Terrabacteria group	Actinobacteria	5.53603	66.5	-	CCDR01	10	5290	5066	5/16/14	4/9/17	Scaffold	URMITE	SAMEA3139061	GCA_000724065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/065/GCA_000724065.1_PRJEB1060_assembly_1	-	DSM 44074
Mycobacterium asiaticum	1790	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.03512	66.8	-	LZKQ01	337	5767	5336	6/17/16	4/5/17	Contig	JCVI	SAMN05202170	GCA_001668675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/668/675/GCA_001668675.1_ASM166867v1	-	1081914.2
Rhodonellum psychrophilum GCM71 = DSM 17998	1123057	PRJNA219509	219509	FCB group	Bacteroidetes/Chlorobi group	5.13715	41.8	-	AWXR01	199	4349	4258	9/30/13	4/9/17	Contig	University of Copenhagen	SAMN02471707	GCA_000473765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/765/GCA_000473765.1_Rpsyc1.0	24309741	GCM71
Desulfurispirillum indicum S5	653733	PRJNA38575	38575	Chrysiogenetes	Chrysiogenetes	2.92838	56.1	chromosome:NC_014836.1/CP002432.1	-	1	2741	2576	1/4/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02232016	GCA_000177635.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/635/GCA_000177635.2_ASM17763v2	-	S5
Serratia plymuthica 4Rx13	682634	PRJNA41033	41033	Proteobacteria	Gammaproteobacteria	5.40373	56.0879	chromosome:NC_021591.1/CP006250.1; plasmid p75:NC_021594.1/CP006251.1	-	2	5060	4804	6/25/13	4/1/17	Complete Genome	Georg-August Universität Göttingen	SAMN02603255	GCA_000176835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/835/GCA_000176835.2_ASM17683v2	-	4Rx13
Zooshikella ganghwensis	202772	PRJNA383317	383317	Proteobacteria	Gammaproteobacteria	6.60515	41.1	-	NDXW01	12	5964	5705	8/21/17	8/23/17	Contig	King Abdullah University of Science and Technology	SAMN06761330	GCA_002261065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/065/GCA_002261065.1_ASM226106v1	-	JC2044
Streptococcus henryi	439219	PRJEB16178	348941	Terrabacteria group	Firmicutes	2.42928	38.5	-	FMXP01	63	2373	2214	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910293	GCA_900104235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/235/GCA_900104235.1_IMG-taxon_2593339212_annotated_assembly	-	A-4
Varibaculum cambriense	184870	PRJNA246506	246506	Terrabacteria group	Actinobacteria	2.09699	53.1	-	LSDN01	14	1872	1788	2/8/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN03956212	GCA_001553285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/285/GCA_001553285.1_ASM155328v1	-	DNF00696
Selenomonas bovis 8-14-1	1410673	PRJNA223439	223439	Terrabacteria group	Firmicutes	2.61586	59.5	-	JNKB01	115	2416	2261	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841180	GCA_000701885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/885/GCA_000701885.1_ASM70188v1	-	8/14/01
Halomonas anticariensis FP35 = DSM 16096	1121939	PRJNA182406	182406	Proteobacteria	Gammaproteobacteria	5.01954	58.5	-	AUAB01	63	4699	4508	7/15/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441216	GCA_000428505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/505/GCA_000428505.1_ASM42850v1	-	DSM 16096
Proteiniphilum acetatigenes	294710	PRJNA278302	278302	FCB group	Bacteroidetes/Chlorobi group	1.71623	49.6	-	LGGN01	436	1676	1676	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445167	GCA_001508485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/485/GCA_001508485.1_ASM150848v1	26787827	-
Megasphaera cerevisiae	39029	PRJNA355127	355127	Terrabacteria group	Firmicutes	3.01573	45	-	MQNM01	162	2788	2608	12/22/16	4/16/17	Scaffold	University of Saskatchewan	SAMN06062375	GCA_001913815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/815/GCA_001913815.1_ASM191381v1	-	NSB1
Flavobacterium rivuli WB 3.3-2 = DSM 21788	1121895	PRJNA221769	221769	FCB group	Bacteroidetes/Chlorobi group	4.47997	39.6	-	JRLX01	63	3999	3896	10/28/14	4/9/17	Contig	hzau	SAMN03078691	GCA_000769825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/825/GCA_000769825.1_ASM76982v1	-	WB 3.3-2
Nosocomiicoccus sp. HMSC067E10	1739271	PRJNA299921	299921	Terrabacteria group	Firmicutes	1.65255	35.7	-	LTHD01	46	1686	1635	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477606	GCA_001810835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/835/GCA_001810835.1_ASM181083v1	-	HMSC067E10
Endozoicomonas sp. (ex Bugula neritina AB1)	1868284	PRJNA322176	322176	Proteobacteria	Gammaproteobacteria	4.04936	45.3	-	MDLD01	272	3556	3376	9/16/16	9/16/16	Scaffold	University of Wisconsin - Madison	SAMN03766369	GCA_001729985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/985/GCA_001729985.1_AB1_endozoicomonas	27681823	-
Rhodopirellula europaea SH398	1263868	PRJNA182224	182224	PVC group	Planctomycetes	7.44619	55.8	-	ANOF01	208	6119	5775	3/12/13	5/19/17	Contig	Microbial Interactions in MArine Systems (MIMAS)	SAMN02261080	GCA_000346315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/315/GCA_000346315.1_ASM34631v1	23273849	SH398
Ochrobactrum anthropi	529	PRJNA244571	244571	Proteobacteria	Alphaproteobacteria	4.90116	56.0831	chromosome 1:NZ_CP008820.1/CP008820.1; chromosome 2:NZ_CP008819.1/CP008819.1; plasmid p1:NZ_CP008817.1/CP008817.1; plasmid p2:NZ_CP008818.1/CP008818.1	-	4	4705	4499	8/21/14	4/2/17	Complete Genome	Los Alamos National Laboratory	SAMN02873951	GCA_000742955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/955/GCA_000742955.1_ASM74295v1	25291772	OAB
Collimonas arenae	279058	PRJNA261963	261963	Proteobacteria	Betaproteobacteria	5.64497	56.0589	chromosome:NZ_CP009962.1/CP009962.1; plasmid unnamed:NZ_CP009963.1/CP009963.1	-	2	5061	4916	11/25/14	4/9/17	Complete Genome	"University of California, Davis"	SAMN03098357	GCA_000786695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/695/GCA_000786695.1_ASM78669v1	-	Cal35
Pantoea sp. PSNIH1	1484158	PRJNA242843	242843	Proteobacteria	Gammaproteobacteria	4.41068	56.0362	chromosome:NZ_CP009880.1/CP009880.2; plasmid pKPC-1c5:NZ_CP009881.1/CP009881.1; plasmid pPSP-057:NZ_CP010325.1/CP010325.1; plasmid pPSP-26e:NZ_CP009882.1/CP009882.1; plasmid pPSP-3a9:NZ_CP010326.1/CP010326.1; plasmid pPSP-a3e:NZ_CP009883.1/CP009883.1; plasmid pPSP-ee2:NZ_CP009884.1/CP009884.1	-	7	4318	4051	11/17/14	4/10/17	Complete Genome	NIH	SAMN02709496	GCA_000784875.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/875/GCA_000784875.3_ASM78487v3	25232178	PSNIH1
Alcaligenes sp. HPC1271	1069631	PRJNA175407	175407	Proteobacteria	Betaproteobacteria	4.27093	56.6	-	AMXV01	78	3899	3834	11/21/12	1/8/14	Contig	National Environmental Engineering Research Institute	SAMN02470625	GCA_000313875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/875/GCA_000313875.1_ASM31387v1	23469352	HPC1271
Prevotella loescheii DSM 19665 = JCM 12249 = ATCC 15930	1122985	PRJNA198894	198894	FCB group	Bacteroidetes/Chlorobi group	3.47505	46.6	-	JNGW01	54	2725	2580	6/5/14	4/9/17	Scaffold	Washington University	SAMN02840639	GCA_000698925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/925/GCA_000698925.1_ASM69892v1	-	ATCC 15930
Eubacterium ramulus	39490	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.30738	43	-	CYYA01	60	3051	2875	10/1/15	4/11/17	Contig	SC	SAMEA3545299	GCA_001406295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/295/GCA_001406295.1_13414_6_75	-	2789STDY5608891
Desulfotomaculum hydrothermale Lam5 = DSM 18033	1121428	PRJEB18241	355524	Terrabacteria group	Firmicutes	2.62878	49.5	-	FQXF01	59	2694	2537	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745177	GCA_900129895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/895/GCA_900129895.1_IMG-taxon_2585428063_annotated_assembly	-	DSM 18033
Sandarakinorhabdus sp. TH057	1981098	PRJNA395960	395960	Proteobacteria	Alphaproteobacteria	3.53274	66.2	-	NOXT01	130	3401	3262	8/14/17	8/16/17	Scaffold	Nanjing Institute of Geography and Limnology	SAMN07418558	GCA_002251755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/755/GCA_002251755.1_ASM225175v1	-	TH057
Porphyromonas gulae	111105	PRJNA253612	253612	FCB group	Bacteroidetes/Chlorobi group	2.3403	48.6	-	JRAG01	40	2097	1917	10/27/14	4/2/17	Scaffold	UC Davis	SAMN03002891	GCA_000769385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/385/GCA_000769385.1_ASM76938v1	25858832	COT-052 OH1355
Enterobacter cloacae complex 'Hoffmann cluster IV'	1812935	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.9	56.036	chromosome:NZ_CP017184.1/CP017184.1; plasmid pDSMZ16690:NZ_CP017185.1/CP017185.1	-	2	4713	4451	9/16/16	4/20/17	Complete Genome	JCVI	SAMN05581750	GCA_001729805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/805/GCA_001729805.1_ASM172980v1	-	DSM 16690
Marivivens sp. JLT3646	1920883	PRJNA354476	354476	Proteobacteria	Alphaproteobacteria	3.14721	56.0174	chromosome:NZ_CP018572.1/CP018572.1; plasmid unnamed:NZ_CP018573.1/CP018573.1	-	2	3135	3032	12/19/16	4/16/17	Complete Genome	Xiamen University	SAMN06046509	GCA_001908835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/835/GCA_001908835.1_ASM190883v1	-	JLT3646
Proteus sp. HMSC14B05	1581097	PRJNA269866	269866	Proteobacteria	Gammaproteobacteria	3.94988	38.6	-	LUAI01	53	3664	3498	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03287025	GCA_001808035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/035/GCA_001808035.1_ASM180803v1	-	HMSC14B05
Tetragenococcus muriaticus PMC-11-5	1302649	PRJNA192567	192567	Terrabacteria group	Firmicutes	2.10076	36	-	JPVU01	354	2142	1422	9/2/14	4/9/17	Contig	"University of Wisconsin-Madison and Suranaree University of Technology, Thailand"	SAMN02954013	GCA_000747235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/235/GCA_000747235.1_ASM74723v1	-	PMC-11-5
Microbacterium oxydans	82380	PRJEB15265	350632	Terrabacteria group	Actinobacteria	3.98989	68.6	-	FMIR01	21	3824	3725	10/26/16	7/29/17	Contig	"UNIVERSITY OF COPENHAGEN, DEPARTMENT OF BIOLOGY"	SAMEA4402499	GCA_900095745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/745/GCA_900095745.1_ASM90009574v1	-	-
Prosthecochloris sp. GSB1	281093	PRJNA395488	395488	FCB group	Bacteroidetes/Chlorobi group	2.46848	56	chromosome:NZ_CP022571.1/CP022571.1	-	1	2364	2269	8/2/17	8/4/17	Complete Genome	The Pennsylvania State University	SAMN07407602	GCA_002240205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/205/GCA_002240205.1_ASM224020v1	-	TY Vent = GSB1 = Ty-1
Tumebacillus sp. AR23208	1903704	PRJNA387509	387509	Terrabacteria group	Firmicutes	5.24977	56	chromosome:NZ_CP021434.1/CP021434.1	-	1	4792	4380	5/31/17	6/2/17	Complete Genome	Kyung Hee University	SAMN07139044	GCA_002162355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/355/GCA_002162355.1_ASM216235v1	-	AR23208
Blastomonas sp. AAP53	1248760	PRJNA178646	178646	Proteobacteria	Alphaproteobacteria	3.61622	63.6	-	ANFZ01	28	3394	3295	1/9/13	4/8/17	Contig	"Institute of Microbiology, ASCR"	SAMN02470020	GCA_000331245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/245/GCA_000331245.1_BlaAAP53ver1.0	23516202	AAP53
Porphyrobacter sp. CACIAM 03H1	2003315	PRJNA387241	387241	Proteobacteria	Alphaproteobacteria	3.52522	67.6	chromosome:NZ_CP021378.1/CP021378.1	-	1	3330	3240	7/6/17	7/8/17	Chromosome	UFPA	SAMN07142739	GCA_002215495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/495/GCA_002215495.1_ASM221549v1	-	CACIAM 03H1
Lactobacillus equicursoris 66c	872326	PRJEB173	174409	Terrabacteria group	Firmicutes	2.35579	47.8	-	CALZ01	161	2265	2035	9/28/12	4/8/17	Contig	Sycou	SAMEA2272320	GCA_000312625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/625/GCA_000312625.1_ASM31262v1	-	66c
Pseudomonas resinovorans DSM 21078	1123020	PRJNA185651	185651	Proteobacteria	Gammaproteobacteria	6.02768	63.6	-	AUIE01	53	5593	5389	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441499	GCA_000423545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/545/GCA_000423545.1_ASM42354v1	-	DSM 21078
Halobacillus sp. BBL2006	1543706	PRJNA260509	260509	Terrabacteria group	Firmicutes	3.98814	41.6	-	JRNX01	1002	4267	3708	11/25/14	4/9/17	Contig	Indiana University Southeast	SAMN03001965	GCA_000786645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/645/GCA_000786645.1_ASM78664v1	-	BBL2006
Vibrio jasicida	766224	PRJDB3039	271954	Proteobacteria	Gammaproteobacteria	6.21788	44.7	-	BBLA01	115	5784	5536	1/7/15	4/10/17	Scaffold	University of Miyazaki	SAMD00019138	GCA_000829615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/615/GCA_000829615.1_ASM82961v1	25527835	201212A
Brevibacillus agri BAB-2500	1246477	PRJNA178058	178058	Terrabacteria group	Firmicutes	5.38649	53.5	-	AOBR01	382	5330	4851	12/21/12	5/18/17	Contig	Gujarat Genomics Initiative	SAMN02469861	GCA_000328345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/345/GCA_000328345.1_Brevibacillus_agri_BAB-2500_v3.1	23472223	BAB-2500
Arthrobacter crystallopoietes	37928	PRJEB15875	347941	Terrabacteria group	Actinobacteria	5.19847	64.4	-	FNKH01	3	4820	4594	10/20/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04489742	GCA_900100805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/805/GCA_900100805.1_IMG-taxon_2634166276_annotated_assembly	-	DSM 20117
Ochrobactrum sp. CDB2	360313	PRJNA159249	159249	Proteobacteria	Alphaproteobacteria	4.97123	53.6	-	AKVI01	146	4777	4503	3/6/13	5/19/17	Contig	UOW	SAMN02472024	GCA_000344725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/725/GCA_000344725.1_ASM34472v1	23599296	CDB2
Pseudomonas umsongensis 20MFCvi1.1	1151128	PRJNA178050	178050	Proteobacteria	Gammaproteobacteria	6.45866	59.4	-	ARIW01	27	5961	5787	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440461	GCA_000377725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/725/GCA_000377725.1_ASM37772v1	-	20MFCvi1.1
Moorea producens JHB	1454205	PRJNA345361	345361	Terrabacteria group	Cyanobacteria/Melainabacteria group	9.38476	43.6993	chromosome:NZ_CP017708.1/CP017708.1; plasmid unnamed1:NZ_CP017709.1/CP017709.1; plasmid unnamed2:NZ_CP017710.1/CP017710.1	-	3	7399	6690	10/26/16	4/13/17	Chromosome	UCSD	SAMN05826284	GCA_001854205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/205/GCA_001854205.1_ASM185420v1	-	JHB
Staphylococcus pettenkoferi VCU012	904314	PRJNA53711	53711	Terrabacteria group	Firmicutes	2.45496	38.7	-	AGUA01	116	2353	2192	12/22/11	4/7/17	Contig	J. Craig Venter Institute	SAMN00116871	GCA_000260275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/275/GCA_000260275.1_ASM26027v1	-	VCU012
Haloferax sp. ATCC BAA-645	1227463	PRJNA174908	174908	Euryarchaeota	Halobacteria	3.59821	66.6	-	AOLE01	41	3591	3475	2/4/13	4/8/17	Contig	"University of California, Davis"	SAMN02471635	GCA_000336835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/835/GCA_000336835.1_ASM33683v1	25393412	ATCC BAA-645
Klebsiella michiganensis KCTC 1686	1006551	PRJNA65523	65523	Proteobacteria	Gammaproteobacteria	5.97411	56	chromosome:NC_016612.1/CP003218.1	-	1	5708	5441	12/29/11	3/22/17	Complete Genome	Macrogen Inc.	SAMN02603580	GCA_000240325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/325/GCA_000240325.1_ASM24032v1	22493189	KCTC 1686
Leptospira alstonii serovar Pingchang str. 80-412	1218564	PRJNA177154	177154	Spirochaetes	Spirochaetia	4.4373	42.5	-	AOHD02	67	4218	3868	1/18/13	4/8/17	Contig	J. Craig Venter Institute	SAMN02436571	GCA_000332555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/555/GCA_000332555.2_gls454193v02	-	80-412
Butyricimonas sp. An62	1965649	PRJNA377666	377666	FCB group	Bacteroidetes/Chlorobi group	5.21089	42.7	-	NFHW01	15	4127	4004	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473741	GCA_002161485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/485/GCA_002161485.1_ASM216148v1	-	An62
Glaciecola pallidula DSM 14239 = ACAM 615	1121922	PRJDB30	176791	Proteobacteria	Gammaproteobacteria	4.36069	41.2	-	BAEQ01	68	3849	3661	10/6/12	5/18/17	Contig	Shandong University	SAMD00036603	GCA_000315035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/035/GCA_000315035.1_ASM31503v1	25009843	ACAM 615
Serratia sp. AS13	768493	PRJNA60455	60455	Proteobacteria	Gammaproteobacteria	5.44255	56	chromosome:NC_017573.1/CP002775.1	-	1	5153	4973	5/25/11	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713631	GCA_000214805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/805/GCA_000214805.1_ASM21480v1	23450001	AS13
Amycolatopsis azurea DSM 43854	1238180	PRJNA371521	371521	Terrabacteria group	Actinobacteria	9.21791	68.9	-	MUXN01	54	8550	8349	2/11/17	4/17/17	Scaffold	Institute of Microbial Technology	SAMN06309423	GCA_001995215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/215/GCA_001995215.1_ASM199521v1	-	DSM 43854
Streptomyces bottropensis ATCC 25435	1054862	PRJNA104983	104983	Terrabacteria group	Actinobacteria	8.95573	71.2	-	ARTP01	1	7899	7553	4/26/13	3/9/17	Scaffold	JGI	SAMN02261243	GCA_000383595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/595/GCA_000383595.1_ASM38359v1	-	ATCC 25435
Mycobacterium bohemicum	56425	PRJNA299467	299467	Terrabacteria group	Actinobacteria	5.42052	69.2	-	LQOK01	52	5040	4826	4/20/17	4/22/17	Contig	University of Trento	SAMN04216914	GCA_002102025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/025/GCA_002102025.1_ASM210202v1	-	DSM 44277
Mycobacterium simiae ATCC 25275 = DSM 44165	1236483	PRJEB1560	201373	Terrabacteria group	Actinobacteria	5.78297	65.8	-	CBMJ02	1	5516	4924	6/27/13	4/8/17	Scaffold	URMITE	SAMEA2272207	GCA_000455305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/305/GCA_000455305.1_MsimiaeDSM44165	-	ATCC 25275 = DSM 44165
Kocuria palustris PEL	1236550	PRJNA176179	176179	Terrabacteria group	Actinobacteria	2.87211	70.4	-	ANHZ02	55	2561	2431	11/29/12	4/8/17	Contig	IMTECH	SAMN02469979	GCA_000315815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/815/GCA_000315815.2_ASM31581v2	24504000	PEL
Bacillus stratosphericus	293386	PRJNA277429	277429	Terrabacteria group	Firmicutes	3.702	41.3	-	LDWU01	53	3847	3721	6/24/15	4/3/17	Contig	University of Malaya	SAMN03751793	GCA_001038775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/775/GCA_001038775.1_ASM103877v1	-	LK33
Serratia sp. AS12	768490	PRJNA60453	60453	Proteobacteria	Gammaproteobacteria	5.44301	56	chromosome:NC_015566.1/CP002774.1	-	1	5153	4974	5/20/11	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713623	GCA_000214195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/195/GCA_000214195.1_ASM21419v1	22768360	AS12
Chitinophaga sp. YR627	1881041	PRJEB17119	351329	FCB group	Bacteroidetes/Chlorobi group	9.11787	45.5	-	FOUX01	14	7241	7131	10/30/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428949	GCA_900114995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/995/GCA_900114995.1_IMG-taxon_2693429788_annotated_assembly	-	YR627
Lactobacillus murinus DSM 20452 = NBRC 14221	1423772	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.18316	40	-	AYYN01	176	2096	1946	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369407	GCA_001436015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/015/GCA_001436015.1_ASM143601v1	26415554	DSM 20452
Anaerotruncus sp. CAG:528	1262700	PRJEB919	206717	Terrabacteria group	Firmicutes	1.88108	43.9	-	CBBE01	34	1744	1705	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138586	GCA_000433975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/975/GCA_000433975.1_MGS528	-	-
Pelosinus sp. HCF1	1235479	PRJNA175909	175909	Terrabacteria group	Firmicutes	4.97102	39.8	-	AMZI01	208	4638	4466	12/5/12	5/19/17	Contig	LBNL Sustainable Systems Scientific Focus Area	SAMN02470229	GCA_000317005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/005/GCA_000317005.1_Hcf1DRAFT	23064329	HCF1
Bhargavaea cecembensis DSE10	1235279	PRJNA175862	175862	Terrabacteria group	Firmicutes	3.20746	54.8	-	AOFT01	39	3199	3104	3/25/13	4/8/17	Contig	Centre for Cellular and Molecular Biology	SAMN02469443	GCA_000348905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/905/GCA_000348905.1_BhCe1	23766406	DSE10
Gramella sp. MAR_2010_102	1250231	PRJEB16425	349349	FCB group	Bacteroidetes/Chlorobi group	3.54518	37	chromosome I:NZ_LT629745.1/LT629745.1	-	1	3228	3122	10/21/16	7/28/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04488552	GCA_900105035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/035/GCA_900105035.1_IMG-taxon_2634166337_annotated_assembly	-	Mar_2010_102
Paraclostridium bifermentans ATCC 19299	1233170	PRJNA175455	175455	Terrabacteria group	Firmicutes	3.53524	28.1	-	AVNB01	58	3453	3308	8/20/13	4/11/17	Contig	Institute for Genome Sciences	SAMN01978892	GCA_000452225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/225/GCA_000452225.2_ASM45222v2	-	ATCC 19299
Thauera linaloolentis 47Lol = DSM 12138	1123367	PRJNA175415	175415	Proteobacteria	Betaproteobacteria	4.19994	66.6	-	AMXE01	220	3878	3666	11/6/12	6/20/17	Contig	Norwegian University of Life Sciences	SAMN02470716	GCA_000310205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/205/GCA_000310205.1_ASM31020v1	-	47Lol = DSM 12138
Donghicola sp. KarMa	1779855	PRJEB15154	356005	Proteobacteria	Alphaproteobacteria	4.21284	59.1	-	FMJB01	66	4106	3957	12/2/16	4/16/17	Contig	CEBITEC	SAMEA4412807	GCA_900095785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/785/GCA_900095785.1_KARMA	-	-
Desulfuromonas sp. TF	1232410	PRJNA175252	175252	Proteobacteria	delta/epsilon subdivisions	4.40275	58.6	-	ATBO01	17	4058	3873	9/30/13	4/9/17	Scaffold	Chungbuk National University	SAMN02469593	GCA_000472285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/285/GCA_000472285.1_ASM47228v1	24118987	TF
Nitratireductor indicus	721133	PRJEB17443	351628	Proteobacteria	Alphaproteobacteria	5.00593	60.8	-	FOXZ01	36	4883	4749	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216176	GCA_900115835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/835/GCA_900115835.1_IMG-taxon_2663762748_annotated_assembly	-	CGMCC 1.10953
Paraburkholderia phenoliruptrix AC1100	1337996	PRJNA205406	205406	Proteobacteria	Betaproteobacteria	7.81103	63.1	-	ASXI01	286	7319	6928	7/1/13	4/10/17	Contig	"School of Molecular Biosciences, Washington State University"	SAMN02436660	GCA_000416445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/445/GCA_000416445.1_Velvet_for_BPAC1100	23929488	AC1100
Rhizobacter sp. Root1221	1736433	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	6.86502	67.8	-	LMDI01	76	6165	5945	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155702	GCA_001425785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/785/GCA_001425785.1_Root1221	26633631	Root1221
Pelomonas sp. Root1217	1736430	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	6.6499	67.4	-	LMDC01	32	5963	5797	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155699	GCA_001425705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/705/GCA_001425705.1_Root1217	26633631	Root1217
Serratia plymuthica AS9	768492	PRJNA60457	60457	Proteobacteria	Gammaproteobacteria	5.44288	56	chromosome:NC_015567.1/CP002773.1	-	1	5151	4973	5/20/11	3/30/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713621	GCA_000214235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/235/GCA_000214235.1_ASM21423v1	"2,188,685,722,675,590"	AS9
Moraxella sp. VT-16-12	2014877	PRJNA391402	391402	Proteobacteria	Gammaproteobacteria	2.15054	43.1	-	NKHK01	89	2181	2051	7/24/17	7/28/17	Contig	Human Microbiology Institute	SAMN07267518	GCA_002224245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/245/GCA_002224245.1_ASM222424v1	-	VT-16-12
Bacteroides graminisolvens DSM 19988 = JCM 15093	1121097	PRJDB586	243161	FCB group	Bacteroidetes/Chlorobi group	3.6807	41.5	-	BAJS01	63	3141	2634	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00016568	GCA_000613825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/825/GCA_000613825.1_ASM61382v1	25736980	JCM 15093
Bacteroides barnesiae DSM 18169 = JCM 13652	1121094	PRJDB577	243153	FCB group	Bacteroidetes/Chlorobi group	3.62855	46.8	-	BAJJ01	65	3105	2541	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00015967	GCA_000613645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/645/GCA_000613645.1_ASM61364v1	-	JCM 13652
Acinetobacter tjernbergiae DSM 14971 = CIP 107465	1120928	PRJNA183328	183328	Proteobacteria	Gammaproteobacteria	3.65243	38.5	-	AYEV01	76	3531	3319	10/29/13	4/6/17	Contig	Broad Institute	SAMN01828188	GCA_000488175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/175/GCA_000488175.1_Acin_tjer_CIP_107465_V2	-	CIP 107465
Klebsiella oxytoca	571	PRJNA246471	246471	Proteobacteria	Gammaproteobacteria	6.39439	55.9319	chromosome:NZ_CP018362.1/CP018362.1; plasmid pCAV1752-111:NZ_CP018360.1/CP018360.1; plasmid pCAV1752-278:NZ_CP018361.1/CP018361.1; plasmid pCAV1752-3851:NZ_CP018357.1/CP018357.1; plasmid pCAV1752-4374:NZ_CP018358.1/CP018358.1; plasmid pCAV1752-5521:NZ_CP018359.1/CP018359.1	-	6	6263	5949	12/13/16	2/22/17	Complete Genome	University of Oxford	SAMN03733848	GCA_001970835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/970/835/GCA_001970835.1_ASM197083v1	-	CAV1752
Paraglaciecola psychrophila 170	1129794	PRJDB33	176793	Proteobacteria	Gammaproteobacteria	5.3356	40.3	-	BAES01	107	4820	4567	10/6/12	5/18/17	Contig	Shandong University	SAMD00036605	GCA_000315075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/075/GCA_000315075.1_ASM31507v1	25009843	170
Gibbsiella quercinecans	929813	PRJNA308223	308223	Proteobacteria	Gammaproteobacteria	5.54851	55.9	chromosome:NZ_CP014136.1/CP014136.1	-	1	5071	4829	9/12/17	9/18/17	Complete Genome	Bangor University	SAMN04388492	GCA_002291425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/425/GCA_002291425.1_ASM229142v1	-	FRB97
Alcaligenes faecalis	511	PRJNA388257	388257	Proteobacteria	Betaproteobacteria	4.07835	55.9	chromosome:NZ_CP021641.1/CP021641.1	-	1	3721	3611	8/7/17	8/9/17	Complete Genome	Nanjing Agricultural University	SAMN07173706	GCA_002242175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/175/GCA_002242175.1_ASM224217v1	-	JQ135
Brevibacterium casei	33889	PRJNA308058	308058	Terrabacteria group	Actinobacteria	3.76911	68.1	-	LQQR01	88	3406	3293	4/13/16	4/12/17	Contig	University of Malaya	SAMN04386401	GCA_001619685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/685/GCA_001619685.1_ASM161968v1	-	M40
Bacteroides pyogenes DSM 20611 = JCM 6294	1121100	PRJNA174175	174175	FCB group	Bacteroidetes/Chlorobi group	3.42704	45.7	-	ATZH01	73	2919	2728	7/15/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441225	GCA_000428105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/105/GCA_000428105.1_ASM42810v1	-	DSM 20611
Bacteroides gallinarum DSM 18171 = JCM 13658	1121096	PRJDB578	243154	FCB group	Bacteroidetes/Chlorobi group	4.8384	47.8	-	BAJK01	141	4174	3297	4/1/14	4/10/17	Contig	The University of Tokyo	SAMD00012956	GCA_000613665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/665/GCA_000613665.1_ASM61366v1	-	JCM 13658
Klebsiella sp. M5al	1934254	PRJNA361010	361010	Proteobacteria	Gammaproteobacteria	5.80014	55.9	chromosome:NZ_CP020657.1/CP020657.1	-	1	5593	5309	4/13/17	4/17/17	Complete Genome	Zhejiang University	SAMN06219347	GCA_002090195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/195/GCA_002090195.1_ASM209019v1	-	M5al
Actinomyces johnsonii F0510	1227262	PRJNA173933	173933	Terrabacteria group	Actinobacteria	3.38306	67.3	-	AWSD01	324	2943	2589	9/10/13	4/11/17	Scaffold	Washington University	SAMN02436754	GCA_000466205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/205/GCA_000466205.2_ASM46620v2	-	F0510
Sphaerimonospora mesophila NBRC 14179 = JCM 3151	1226285	PRJDB492	173914	Terrabacteria group	Actinobacteria	7.33679	70	-	BCRI01	350	-	-	2/5/16	2/5/16	Contig	National Institute of Technology and Evaluation	SAMD00046509	GCA_001552515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/515/GCA_001552515.1_ASM155251v1	-	NBRC 14179
Lactobacillus saerimneri 30a	1227363	PRJNA177379	177379	Terrabacteria group	Firmicutes	1.63399	42.6	-	ANAG01	22	1586	1491	12/5/12	4/8/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02469940	GCA_000317165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/165/GCA_000317165.1_O1P2RL8	23405290	30a
Viridibacillus arenosi	263476	PRJNA343020	343020	Terrabacteria group	Firmicutes	4.43416	35.3	-	MSPW01	44	4323	4227	1/18/17	4/17/17	Contig	Cornell University	SAMN05929620	GCA_001955655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/655/GCA_001955655.1_ASM195565v1	-	FSL R5-0213
Gordonia sihwensis	173559	PRJNA275795	275795	Terrabacteria group	Actinobacteria	4.15561	68.1	-	JZDP01	348	4074	3677	3/23/15	4/10/17	Contig	UDRI	SAMN03353333	GCA_000960465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/465/GCA_000960465.1_ASM96046v1	-	9
Mycobacterium mucogenicum	56689	PRJNA299404	299404	Terrabacteria group	Actinobacteria	6.36149	66.9	-	LSKA01	564	6298	5678	2/10/16	4/12/17	Contig	Georgia Institute of Technology	SAMN04299477	GCA_001556905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/905/GCA_001556905.1_ASM155690v1	-	CCH10-A2
Thioalkalivibrio versutus	106634	PRJNA371771	371771	Proteobacteria	Gammaproteobacteria	2.83534	66.4	-	MVAR01	58	2731	2584	2/13/17	4/17/17	Scaffold	University of Amsterdam	SAMN06311538	GCA_001999325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/325/GCA_001999325.1_ASM199932v1	-	AL 2
Nocardia rhamnosiphila NBRC 108938	1223547	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.67316	68.5	-	JOEJ01	108	6909	6688	7/2/14	4/9/17	Contig	University of Illinois	SAMN02645234	GCA_000721005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/005/GCA_000721005.1_ASM72100v1	-	NRRL B-24637
Gordonia malaquae	410332	PRJEB16380	349316	Terrabacteria group	Actinobacteria	4.71435	66.2	-	FNRZ01	8	4478	4293	10/22/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488550	GCA_900105435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/435/GCA_900105435.1_IMG-taxon_2639762576_annotated_assembly	-	DSM 45064
Blautia sp. KLE 1732	1226324	PRJNA173639	173639	Terrabacteria group	Firmicutes	3.57377	44.2	-	AWSY01	185	3395	3176	9/12/13	4/17/17	Scaffold	Washington University	SAMN02436722	GCA_000466565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/565/GCA_000466565.1_ASM46656v1	-	KLE 1732
Mycobacterium chlorophenolicum JCM 7439 = NBRC 15527	1303685	PRJDB464	173183	Terrabacteria group	Actinobacteria	7.33022	68.4	-	BCQY01	107	7057	6753	2/3/16	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00046518	GCA_001552315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/315/GCA_001552315.1_ASM155231v1	-	NBRC 15527
Lactobacillus senmaizukei DSM 21775 = NBRC 103853	1423803	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.22296	48.6	-	AYZH01	68	2167	2069	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369473	GCA_001436675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/675/GCA_001436675.1_ASM143667v1	26415554	DSM 21775
Smaragdicoccus niigatensis DSM 44881 = NBRC 103563	1123258	PRJDB460	173179	Terrabacteria group	Actinobacteria	5.3109	64.3	-	BCRU01	73	5152	4998	2/6/16	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00046495	GCA_001552795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/795/GCA_001552795.1_ASM155279v1	-	NBRC 103563
Lactobacillus nodensis DSM 19682 = JCM 14932 = NBRC 107160	1423775	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.6832	37.6	-	AZDZ01	22	2671	2567	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369463	GCA_001435555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/555/GCA_001435555.1_ASM143555v1	26415554	DSM 19682
Fuerstia marisgermanicae	1891926	PRJNA341581	341581	PVC group	Planctomycetes	8.92048	55.9	chromosome:NZ_CP017641.1/CP017641.1	-	1	6739	6558	2/3/17	4/17/17	Complete Genome	Leibniz-Institute DSMZ German Collection of Microorganisms and Cell Cultures	SAMN05726332	GCA_001983935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/935/GCA_001983935.1_ASM198393v1	28066393	NH11
Corynebacterium xerosis	1725	PRJNA280206	280206	Terrabacteria group	Actinobacteria	2.74991	68.7	-	LAYS01	152	2506	2005	5/5/15	4/18/17	Contig	Universidade Federal do Para	SAMN03458390	GCA_000988235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/235/GCA_000988235.1_ASM98823v1	26516374	ATCC 373
Microbacterium paraoxydans 77MFTsu3.2	1151126	PRJNA185292	185292	Terrabacteria group	Actinobacteria	3.47903	69.5	-	AQYI01	7	3549	3446	4/23/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441056	GCA_000380465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/465/GCA_000380465.1_ASM38046v1	-	77MFTsu3.2
Microbacterium oleivorans	273677	PRJNA239285	239285	Terrabacteria group	Actinobacteria	2.89862	69	-	JFYO01	11	2820	2745	4/14/14	4/6/17	Contig	Monash University Malaysia	SAMN02676623	GCA_000632065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/065/GCA_000632065.1_Willow_Endophyte_RIT293	24812212	RIT293
Corynebacterium minutissimum	38301	PRJNA280208	280208	Terrabacteria group	Actinobacteria	2.78006	61.1	-	LAYQ01	42	2619	2261	5/5/15	4/10/17	Contig	Universidade Federal do Para	SAMN03458463	GCA_000988205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/205/GCA_000988205.1_ASM98820v1	26516374	1941
Microbacterium hydrocarbonoxydans NBRC 103074	1223527	PRJDB452	173171	Terrabacteria group	Actinobacteria	3.47699	68.6	-	BCRF01	106	3382	3225	2/5/16	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00046491	GCA_001552455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/455/GCA_001552455.1_ASM155245v1	-	NBRC 103074
Cellulomonas iranensis	76862	PRJNA385833	385833	Terrabacteria group	Actinobacteria	4.21797	74.7	-	NFZP01	543	3823	3545	6/2/17	6/5/17	Contig	UW-Madison	SAMN06917003	GCA_002165145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/145/GCA_002165145.1_ASM216514v1	-	SID13905
Bacillus trypoxylicola NBRC 102646	1223507	PRJDB433	173152	Terrabacteria group	Firmicutes	4.26691	35.6	-	BCWA01	309	4055	3945	2/27/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046989	GCA_001592025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/025/GCA_001592025.1_ASM159202v1	-	NBRC 102646
Moraxella atlantae	34059	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.28898	48.2	-	LZNA01	70	2069	1917	7/5/16	4/13/17	Scaffold	TAILORED-Treatment project	SAMN05213465	GCA_001678995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/995/GCA_001678995.1_ASM167899v1	-	CCUG 59586
Moraxella lacunata	477	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.68358	44.4	-	LZMS01	126	2542	2419	7/5/16	4/13/17	Scaffold	TAILORED-Treatment project	SAMN05217631	GCA_001679225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/225/GCA_001679225.1_ASM167922v1	-	CCUG 57757A
Parageobacillus toebii	153151	PRJNA270597	270597	Terrabacteria group	Firmicutes	3.52751	42.2	-	LQYW01	201	3631	3262	3/11/16	4/12/17	Scaffold	University of Groningen	SAMN03267295	GCA_001587455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/455/GCA_001587455.1_B4110	27151781	B4110
Solibacillus isronensis	412383	PRJEB19810	377947	Terrabacteria group	Firmicutes	4.10346	38.5	-	FVZN01	14	4068	3895	3/11/17	3/18/17	Contig	URMITE	SAMEA103530418	GCA_900168685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/685/GCA_900168685.1_PRJEB19810	-	Marseille-P3605
Corynebacterium vitaeruminis Ga6A13	1410654	PRJNA223486	223486	Terrabacteria group	Actinobacteria	2.90945	65.5	-	JNKV01	69	2671	2526	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841225	GCA_000702185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/185/GCA_000702185.1_ASM70218v1	-	Ga6A13
Nocardia pseudobrasiliensis	45979	PRJDB3975	297084	Terrabacteria group	Actinobacteria	8.8551	68.1	-	BBXO01	2032	-	-	9/25/15	9/25/15	Scaffold	"Medical Mycology Research Center, Chiba University"	SAMD00031899	GCA_001304815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/815/GCA_001304815.1_ASM130481v1	-	IFM 0761
Nocardia jinanensis NBRC 108249	1210082	PRJDB169	173003	Terrabacteria group	Actinobacteria	7.97857	67.4	-	BDBO01	165	-	-	4/1/16	4/1/16	Contig	National Institute of Technology and Evaluation	SAMD00040656	GCA_001613025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/025/GCA_001613025.1_ASM161302v1	-	NBRC 108249
Dickeya sp. NCPPB 3274	568766	PRJNA172949	172949	Proteobacteria	Gammaproteobacteria	5.11502	56.4419	chromosome:NZ_CM001979.1/CM001979.1	AOOH01	15	4582	4362	6/4/13	4/17/17	Chromosome	James Hutton Institute	SAMN02470096	GCA_000406205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/205/GCA_000406205.1_DXX3274_1.0	24265502	NCPPB 3274
Corynebacterium humireducens NBRC 106098 = DSM 45392	1223515	PRJDB440	173159	Terrabacteria group	Actinobacteria	2.62174	68.8	-	BCSU01	51	2553	2449	2/10/16	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00046477	GCA_001571025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/025/GCA_001571025.1_ASM157102v1	-	NBRC 106098
Dickeya dianthicola GBBC 2039	1226343	PRJNA173463	173463	Proteobacteria	Gammaproteobacteria	4.79824	56.2597	chromosome:NZ_CM001838.1/CM001838.1	AOOM01	32	4404	4075	4/3/13	4/10/17	Chromosome	James Hutton Institute	SAMN02470103	GCA_000365365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/365/GCA_000365365.1_DDIGBBC2039_1.0	23887905	GBBC 2039
Moorella thermoacetica	1525	PRJNA330910	330910	Terrabacteria group	Firmicutes	2.56038	55.9	chromosome:NZ_CP017237.1/CP017237.1	-	1	2568	2444	11/10/16	4/5/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05430237	GCA_001874605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/605/GCA_001874605.1_ASM187460v1	-	DSM 103284
Marinobacter salinus	1874317	PRJNA349097	349097	Proteobacteria	Gammaproteobacteria	4.12101	55.9	chromosome:NZ_CP017715.1/CP017715.1	-	1	3820	3712	10/26/16	4/13/17	Complete Genome	Jeju National University	SAMN05920294	GCA_001854125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/125/GCA_001854125.1_ASM185412v1	-	Hb8
Lactobacillus florum 2F	1221537	PRJNA172730	172730	Terrabacteria group	Firmicutes	1.26184	41.5	-	ALXF01	46	1225	1181	10/9/12	4/8/17	Contig	"University of California, Davis"	SAMN02471614	GCA_000304715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/715/GCA_000304715.1_2F_v3c	23405360	2F
Acinetobacter schindleri NIPH 900	1217675	PRJNA183303	183303	Proteobacteria	Gammaproteobacteria	3.4149	42.4	-	APPI01	12	3342	3115	4/16/13	4/10/17	Scaffold	Broad Institute	SAMN01087915	GCA_000368465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/465/GCA_000368465.1_Acin_schi_NIPH_900_V1	-	NIPH 900
Blastococcus sp. DSM 44205	1550233	PRJEB15803	347785	Terrabacteria group	Actinobacteria	4.04426	73.4	-	FNAW01	30	3900	3766	10/20/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05660485	GCA_900102115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/115/GCA_900102115.1_IMG-taxon_2599185193_annotated_assembly	-	DSM 44205
Psychrobacter phenylpyruvicus DSM 7000 = NBRC 102152	1123034	PRJDB411	172610	Proteobacteria	Gammaproteobacteria	3.05537	41.7	-	BCUH01	182	2545	2418	2/23/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046704	GCA_001591185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/185/GCA_001591185.1_ASM159118v1	-	NBRC 102152
Lysinibacillus odysseyi 34hs-1 = NBRC 100172	1220589	PRJDB408	172607	Terrabacteria group	Firmicutes	4.52364	41	-	BCVX01	34	4480	4373	2/27/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046987	GCA_001591965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/965/GCA_001591965.1_ASM159196v1	-	NBRC 100172
Shewanella algae JCM 21037 = NBRC 103173	1236544	PRJDB633	243211	Proteobacteria	Gammaproteobacteria	4.82769	53	-	BALO01	108	4425	3407	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00015726	GCA_000615045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/045/GCA_000615045.1_ASM61504v1	-	JCM 21037
Bacillus sonorensis	119858	PRJEB19417	374696	Terrabacteria group	Firmicutes	4.54609	45.6	-	FUVB01	13	4763	4522	2/16/17	2/23/17	Scaffold	URMITE	SAMEA88385668	GCA_900166645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/645/GCA_900166645.1_PRJEB19417	-	Marseille-P3463
Bacillus krulwichiae NBRC 102362	1220588	PRJDB407	172606	Terrabacteria group	Firmicutes	4.5195	37.9	-	BCVW01	52	4583	4358	2/27/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046986	GCA_001591945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/945/GCA_001591945.1_ASM159194v1	-	NBRC 102362
Agrobacterium rubi	28099	PRJNA319063	319063	Proteobacteria	Alphaproteobacteria	5.51003	57.2	-	LXKU01	31	5233	5034	7/22/16	4/13/17	Scaffold	Oregon State University	SAMN04901300	GCA_001692345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/345/GCA_001692345.1_ASM169234v1	27547538	W2/73
Raoultella ornithinolytica	54291	PRJNA254096	254096	Proteobacteria	Gammaproteobacteria	5.39827	55.9	chromosome:NZ_CP008886.1/CP008886.1	-	1	5143	4904	8/9/16	4/5/17	Complete Genome	The University of Hong Kong	SAMN02900755	GCA_001700855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/855/GCA_001700855.1_ASM170085v1	-	A14
Granulicoccus phenolivorans NBRC 107789	1220580	PRJDB399	172598	Terrabacteria group	Actinobacteria	4.06301	69.3	-	BCQZ01	44	3747	3635	2/5/16	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00046501	GCA_001552335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/335/GCA_001552335.1_ASM155233v1	-	NBRC 107789
Delftia tsuruhatensis	180282	PRJNA252788	252788	Proteobacteria	Betaproteobacteria	6.73215	66.3	-	JNWH01	153	6294	3965	6/18/14	4/10/17	Contig	State Key Laboratory of Pathogen and Biosecurity	SAMN02863025	GCA_000710165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/165/GCA_000710165.1_ASM71016v1	-	391
Gordonia amicalis CCMA-559	1386969	PRJNA215264	215264	Terrabacteria group	Actinobacteria	5.17957	67.4	-	AWTB01	117	4677	4443	9/27/13	4/9/17	Contig	University of Campinas	SAMN02471693	GCA_000472025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/025/GCA_000472025.1_Gordonia_amicalis_CCMA-559	24179120	CCMA-559
Leptolyngbya sp. O-77	1080068	PRJDB4517	309824	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.48026	55.9	chromosome Unknown:NZ_AP017367.1/AP017367.1	-	1	4644	4291	1/29/16	4/17/17	Complete Genome	Kyushu University	SAMD00045841	GCA_001548395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/395/GCA_001548395.1_ASM154839v1	-	O-77
Moorella thermoacetica	1525	PRJNA292082	292082	Terrabacteria group	Firmicutes	2.52756	55.9	chromosome:NZ_CP012369.1/CP012369.1	-	1	2556	2431	8/13/15	4/4/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03964770	GCA_001267405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/405/GCA_001267405.1_ASM126740v1	26450731	DSM 521
Pseudothermotoga elfii DSM 9442 = NBRC 107921	1123383	PRJNA221066	221066	Thermotogae	Thermotogae	2.15623	38.7	-	JHYP01	2	2137	2065	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743994	GCA_000621345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/345/GCA_000621345.1_ASM62134v1	-	DSM 9442
Actinomadura madurae LIID-AJ290	1394178	PRJNA217416	217416	Terrabacteria group	Actinobacteria	10.3089	72	-	AWOO02	149	9490	9047	9/17/13	4/9/17	Contig	Universidad Autonoma de Nuevo Leon	SAMN02640231	GCA_000468475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/475/GCA_000468475.2_Amad2	24675856	LIID-AJ290
Pluralibacter gergoviae	61647	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.5355	59	-	JZYL01	123	5239	5010	3/19/15	4/3/17	Contig	JCVI	SAMN03283660	GCA_000957245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/245/GCA_000957245.1_ASM95724v1	-	40874
Vibrio azureus NBRC 104587	1219077	PRJDB356	172325	Proteobacteria	Gammaproteobacteria	4.71628	42.1	-	BATL01	166	4244	4054	9/12/13	4/9/17	Contig	National Institute of Technology and Evaluation	SAMD00041797	GCA_000467165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/165/GCA_000467165.1_ASM46716v1	-	NBRC 104587
Vibrio mediterranei	689	PRJNA407899	407899	Proteobacteria	Gammaproteobacteria	5.94584	44.1	-	NWTO01	69	5607	5392	9/25/17	9/25/17	Contig	UPMC Observatoire de Banyuls	SAMN07665718	GCA_002358135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/358/135/GCA_002358135.1_ASM235813v1	-	21LN0615E
Vibrio gazogenes ATCC 43941	1269943	PRJNA183874	183874	Proteobacteria	Gammaproteobacteria	6.14966	45.5	-	ASAJ01	50	5481	5279	5/10/13	4/21/17	Contig	Smithsonian Institution	SAMN02470996	GCA_000390165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/165/GCA_000390165.1_Whole_genome_shotgun_assembly	-	ATCC 43941
Vibrio nereis NBRC 15637	1219068	PRJDB347	172316	Proteobacteria	Gammaproteobacteria	4.08558	45.4	-	BCUD01	66	3826	3708	2/23/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046758	GCA_001591105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/105/GCA_001591105.1_ASM159110v1	-	NBRC 15637
Sphingopyxis granuli	267128	PRJNA285384	285384	Proteobacteria	Alphaproteobacteria	4.59072	62.8	chromosome:NZ_CP019153.1/CP019153.1	-	1	3108	2937	1/18/17	4/17/17	Chromosome	OSMANIA UNIVERSITY	SAMN06211262	GCA_001956775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/775/GCA_001956775.1_ASM195677v1	-	ku-sg
Sphingopyxis terrae NBRC 15098	1219058	PRJDB337	172306	Proteobacteria	Alphaproteobacteria	4.08296	64.9	-	BCZQ01	62	3931	3783	3/11/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046747	GCA_001598815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/815/GCA_001598815.1_ASM159881v1	-	NBRC 15098
Novosphingobium subterraneum NBRC 16086	1219057	PRJDB336	172305	Proteobacteria	Alphaproteobacteria	4.70017	63.3	-	BCZF01	111	4496	4320	3/11/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046759	GCA_001598575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/575/GCA_001598575.1_ASM159857v1	-	NBRC 16086
Klebsiella michiganensis HKOPL1	1308980	PRJNA194061	194061	Proteobacteria	Gammaproteobacteria	5.91441	55.9	chromosome:NZ_CP004887.1/CP004887.1	-	1	5696	5273	4/15/14	2/21/17	Complete Genome	"Bioinformatics Center,Nanjing Agricultural University"	SAMN03081460	GCA_000632415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/415/GCA_000632415.1_ASM63241v1	-	HKOPL1
Sphingomonas sanguinis	33051	PRJNA278218	278218	Proteobacteria	Alphaproteobacteria	4.01949	65.9	-	LDTE01	226	3734	3508	12/22/15	4/11/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401383	GCA_001476905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/905/GCA_001476905.1_ASM147690v1	26793183	SB4
Sphingomonas paucimobilis	13689	PRJNA239213	239213	Proteobacteria	Alphaproteobacteria	4.87418	63.9	-	JFYY01	81	4743	4520	4/14/14	4/9/17	Contig	Monash University Malaysia	SAMN02677287	GCA_000632085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/085/GCA_000632085.1_Spau505_v1	-	EPA505
Sphingomonas koreensis NBRC 16723	1219046	PRJDB325	172293	Proteobacteria	Alphaproteobacteria	4.33186	66.2	-	BCYW01	60	4135	4010	3/11/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046761	GCA_001598395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/395/GCA_001598395.1_ASM159839v1	-	NBRC 16723
Rhodococcus zopfii NBRC 100606 = JCM 9919	1219030	PRJDB953	245268	Terrabacteria group	Actinobacteria	4.21803	66.6	-	BBGJ01	2979	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016954	GCA_001313705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/705/GCA_001313705.1_ASM131370v1	-	JCM 9919
Sphingobium herbicidovorans NBRC 16415	1219045	PRJNA239216	239216	Proteobacteria	Alphaproteobacteria	4.03233	62.4	-	JFZA02	62	3967	3794	4/14/14	4/9/17	Contig	Monash University Malaysia	SAMN02677289	GCA_000632125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/125/GCA_000632125.2_Sherbi16415_v2	-	NBRC 16415
Sphingomonas adhaesiva	28212	PRJNA407469	407469	Proteobacteria	Alphaproteobacteria	3.76024	69.1	-	NWVC01	36	3529	3419	9/27/17	9/27/17	Contig	Guangdong Institute of Microbiology	SAMN07655726	GCA_002374855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/374/855/GCA_002374855.1_ASM237485v1	-	DSM 7418
Comamonas aquatica DA1877	1457173	PRJNA236741	236741	Proteobacteria	Betaproteobacteria	3.95606	64.8	-	JBOK01	83	3607	3464	3/14/14	4/9/17	Contig	University of Massachusetts Medical School - Worcester	SAMN02598837	GCA_000590985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/985/GCA_000590985.1_ComamonasDA1877	-	DA1877
Rhodococcus tukisamuensis	168276	PRJEB15763	347736	Terrabacteria group	Actinobacteria	5.48901	69.8	-	FNAB01	40	4976	4759	10/20/16	8/30/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444580	GCA_900101735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/735/GCA_900101735.1_IMG-taxon_2675903015_annotated_assembly	-	JCM 11308
Rhodococcus triatomae	300028	PRJEB15939	348247	Terrabacteria group	Actinobacteria	4.7345	68.7	-	FNDN01	38	4430	4297	10/20/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444695	GCA_900099725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/725/GCA_900099725.1_IMG-taxon_2675903013_annotated_assembly	-	DSM 44892
Rhodococcus rhodnii LMG 5362	1273125	PRJNA183987	183987	Terrabacteria group	Actinobacteria	4.38358	69.7	-	APMY01	134	4227	3993	5/6/13	4/8/17	Contig	Swansea University	SAMN02471027	GCA_000389715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/715/GCA_000389715.1_Rrhod1.0	23788540	LMG 5362
Rhodococcus maanshanensis	183556	PRJEB16835	350974	Terrabacteria group	Actinobacteria	5.66792	69.2	-	FOAW01	61	5143	4972	10/29/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444583	GCA_900109405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/405/GCA_900109405.1_IMG-taxon_2675903023_annotated_assembly	-	DSM 44675
Raoultella ornithinolytica B6	1286170	PRJNA187030	187030	Proteobacteria	Gammaproteobacteria	5.39815	55.9	chromosome:NC_021066.1/CP004142.1	-	1	5131	4923	4/18/13	4/1/17	Complete Genome	Macrogen Inc.	SAMN02603584	GCA_000367425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/425/GCA_000367425.1_ASM36742v1	23814034	B6
Rhodococcus koreensis	99653	PRJEB16386	349310	Terrabacteria group	Actinobacteria	10.3116	67.4	-	FNSV01	9	9491	8902	10/22/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04490239	GCA_900105905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/905/GCA_900105905.1_IMG-taxon_2634166362_annotated_assembly	-	DSM 44498
Rhodococcus corynebacterioides	53972	PRJNA306614	306614	Terrabacteria group	Actinobacteria	3.90044	70.2	-	LPZL01	180	3651	3445	5/18/16	4/12/17	Contig	Northumbria University	SAMN04357305	GCA_001646675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/646/675/GCA_001646675.1_ASM164667v1	-	DSM 20151
Paraburkholderia caledonica	134536	PRJNA385617	385617	Proteobacteria	Betaproteobacteria	7.58141	61.8	-	NGUT01	431	6726	6404	6/8/17	6/10/17	Contig	Washington University in Saint Louis	SAMN06915397	GCA_002179925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/925/GCA_002179925.1_ASM217992v1	-	CA-S3F-1
Kluyvera intermedia	61648	PRJNA377218	377218	Proteobacteria	Gammaproteobacteria	5.42008	52.8	-	MWPR01	124	5369	5074	4/14/17	4/21/17	Scaffold	Copenhagen University Hospital Hvidovre	SAMN06458494	GCA_002092975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/975/GCA_002092975.1_ASM209297v1	-	FOSA7093
Kluyvera cryocrescens	580	PRJNA259409	259409	Proteobacteria	Gammaproteobacteria	4.74267	53.4	-	LGHZ01	62	4534	4387	8/11/15	4/10/17	Contig	University of Malaya	SAMN03008042	GCA_001266615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/615/GCA_001266615.1_ASM126661v1	-	L2
Serratia rubidaea	61652	PRJNA296548	296548	Proteobacteria	Gammaproteobacteria	4.92931	59.3	-	LJZP01	290	4669	4427	9/30/15	4/11/17	Contig	"Faculte de Medecine, Universite Paris-Sud"	SAMN04100244	GCA_001304675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/675/GCA_001304675.1_ASM130467v1	26586886	CIP 103234
Klebsiella michiganensis	1134687	PRJNA393093	393093	Proteobacteria	Gammaproteobacteria	6.41857	55.8754	chromosome:NZ_CP023185.1/CP023185.1; plasmid pK518_KPC:NZ_CP023186.1/CP023186.1; plasmid pK518_NDM1:NZ_CP023187.1/CP023187.1; plasmid pK518_NDM5:NZ_CP023188.1/CP023188.1	-	4	6377	5956	9/12/17	9/14/17	Complete Genome	State Key Laboratory for Diagnosis and Treatment of Infectious Disease	SAMN07551913	GCA_002290285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/285/GCA_002290285.1_ASM229028v1	-	K518
Serratia grimesii NBRC 13537	1218094	PRJDB267	172090	Proteobacteria	Gammaproteobacteria	5.0723	52.8	-	BCTT01	40	4785	4644	2/23/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046909	GCA_001590905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/590/905/GCA_001590905.1_ASM159090v1	-	NBRC 13537
Paraburkholderia kururiensis M130	1268285	PRJNA183622	183622	Proteobacteria	Betaproteobacteria	7.12886	65	-	ANSK01	9	6317	6079	2/19/13	5/18/17	Contig	International Centre for Genetic Engineering and Biotechnology	SAMN02470060	GCA_000341045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/045/GCA_000341045.1_120831_BK	23558537	M130
Paraburkholderia fungorum NBRC 102489	1218077	PRJDB250	172073	Proteobacteria	Betaproteobacteria	8.69621	61.8	-	BAYC01	124	7952	7718	4/29/14	4/9/17	Contig	National Institute of Technology and Evaluation	SAMD00000366	GCA_000685055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/055/GCA_000685055.1_ASM68505v1	-	NBRC 102489
Klebsiella michiganensis	1134687	PRJNA393093	393093	Proteobacteria	Gammaproteobacteria	6.41874	55.8747	chromosome:NZ_CP022348.1/CP022348.1; plasmid pK516_KPC:NZ_CP022349.1/CP022349.1; plasmid pK516_NDM1:NZ_CP022350.1/CP022350.1; plasmid pK516_NDM5:NZ_CP022351.1/CP022351.1	-	4	6367	5978	7/12/17	7/14/17	Complete Genome	State Key Laboratory for Diagnosis and Treatment of Infectious Disease	SAMN07315162	GCA_002216835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/835/GCA_002216835.1_ASM221683v1	-	K516
Arthrobacter woluwensis NBRC 107840	1216974	PRJDB236	171904	Terrabacteria group	Actinobacteria	3.62592	68.5	-	BCQN01	36	3320	3212	2/3/16	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00046502	GCA_001552095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/095/GCA_001552095.1_ASM155209v1	-	NBRC 107840
Dyella sp. OK004	1855292	PRJEB17452	351619	Proteobacteria	Gammaproteobacteria	4.96099	63	-	FOZI01	8	4257	4168	11/1/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216570	GCA_900114495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/495/GCA_900114495.1_IMG-taxon_2609459631_annotated_assembly	-	OK004
Roseomonas sp. TAS13	1926319	PRJDB5363	357590	Proteobacteria	Alphaproteobacteria	5.07894	69.9	-	BDLP01	816	4947	4287	12/27/16	4/17/17	Contig	Utsunomiya University	SAMD00068845	GCA_001950415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/415/GCA_001950415.1_ASM195041v1	28275548	TAS13
Pseudomonas mucidolens NBRC 103159	1215111	PRJDB219	171638	Proteobacteria	Gammaproteobacteria	5.79413	59.1	-	BDAH01	65	5388	5084	4/4/17	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046933	GCA_002091735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/735/GCA_002091735.1_ASM209173v1	-	NBRC 103159
Prevotella dentalis DSM 3688	908937	PRJNA56077	56077	FCB group	Bacteroidetes/Chlorobi group	3.35021	55.86	chromosome 1:NC_019960.1/CP003368.1; chromosome 2:NC_019968.1/CP003369.1; plasmid pPREDE01:NC_019961.1/CP003370.1; plasmid pPREDE02:NC_019969.1/CP003371.1	-	4	2647	2513	12/27/12	8/18/15	Complete Genome	DOE Joint Genome Institute	SAMN02232045	GCA_000242335.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/335/GCA_000242335.3_ASM24233v3	-	DSM 3688
Edwardsiella hoshinae NBRC 105699 = ATCC 33379	1216966	PRJDB228	171896	Proteobacteria	Gammaproteobacteria	3.70661	56.8	-	BAUC01	110	3418	3247	10/11/13	4/9/17	Contig	National Institute of Technology and Evaluation	SAMD00041802	GCA_000474215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/215/GCA_000474215.1_ASM47421v1	-	NBRC 105699
Helicobacter heilmannii	35817	PRJEB7975	293180	Proteobacteria	delta/epsilon subdivisions	1.60682	47.8	-	CDMM01	84	1633	1486	8/17/15	4/11/17	Scaffold	UGENT	SAMEA3174166	GCA_001282965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/965/GCA_001282965.1_Hheil	-	-
Pseudomonas plecoglossicida NB2011	1330531	PRJNA201392	201392	Proteobacteria	Gammaproteobacteria	5.41333	62.8	-	ASJX01	85	4978	4744	6/10/13	4/8/17	Scaffold	Zhejiang Wanli University	SAMN02472181	GCA_000412715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/715/GCA_000412715.1_ASM41271v1	23929479	NB2011
Klebsiella michiganensis	1134687	PRJNA253752	253752	Proteobacteria	Gammaproteobacteria	6.31138	55.85	chromosome:NZ_CP008841.1/CP008841.1; plasmid pKOXM1A:NZ_CP008842.1/CP008842.1; plasmid pKOXM1B:NZ_CP008843.1/CP008843.1; plasmid pKOXM1C:NZ_CP008844.1/CP008844.1; plasmid pKOXM1D:NZ_CP008845.1/CP008845.1	-	5	6136	5767	7/9/14	2/21/17	Complete Genome	Macrogen Inc.	SAMN02887315	GCA_000724525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/525/GCA_000724525.1_ASM72452v1	-	M1
Pseudomonas oryzihabitans NBRC 102199	1215113	PRJDB221	171640	Proteobacteria	Gammaproteobacteria	5.02759	66.2	-	BBIT01	34	4649	4560	7/10/14	4/9/17	Contig	National Institute of Technology and Evaluation	SAMD00018430	GCA_000730625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/625/GCA_000730625.1_ASM73062v1	-	NBRC 102199
Pseudomonas nitroreducens	46680	PRJNA390757	390757	Proteobacteria	Gammaproteobacteria	6.48753	65	-	NJBA01	195	5882	5741	6/21/17	6/24/17	Scaffold	University of Houston	SAMN07249578	GCA_002204635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/635/GCA_002204635.1_ASM220463v1	-	DF05
Pseudomonas migulae	78543	PRJEB16490	349426	Proteobacteria	Gammaproteobacteria	6.78231	59.1	-	FNTY01	2	6239	5990	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04490194	GCA_900106025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/025/GCA_900106025.1_IMG-taxon_2636416188_annotated_assembly	-	BS3662
Pseudomonas jinjuensis NBRC 103047	1215105	PRJDB213	171632	Proteobacteria	Gammaproteobacteria	5.86229	66.4	-	BDAD01	48	5241	5112	4/4/17	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046929	GCA_002091655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/655/GCA_002091655.1_ASM209165v1	-	NBRC 103047
Pseudomonas japonica	256466	PRJEB21413	391655	Proteobacteria	Gammaproteobacteria	6.71861	64.1	-	FZOL01	61	5865	5689	7/13/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444352	GCA_900188455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/455/GCA_900188455.1_IMG-taxon_2700988710_annotated_assembly	-	DSM 22348
Pseudomonas indica	137658	PRJNA369069	369069	Proteobacteria	Gammaproteobacteria	5.80122	64.2	-	MUNN01	149	5249	5045	9/6/17	9/8/17	Contig	Instituto de Agricultura Sostenible	SAMN06276401	GCA_002286725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/725/GCA_002286725.1_ASM228672v1	-	PIC105
Pseudomonas flavescens	29435	PRJEB15929	348256	Proteobacteria	Gammaproteobacteria	5.85566	63.5	-	FNDG01	51	5391	5197	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216588	GCA_900100535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/535/GCA_900100535.1_IMG-taxon_2663762794_annotated_assembly	-	LMG 18387
Pseudomonas cremoricolorata DSM 17059 = NBRC 16634	1215098	PRJNA188911	188911	Proteobacteria	Gammaproteobacteria	4.65508	63.5	-	AUEA01	26	4200	4068	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441180	GCA_000425745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/745/GCA_000425745.1_ASM42574v1	-	DSM 17059
Selenomonas sp. oral taxon 920	1884263	PRJNA282954	282954	Terrabacteria group	Firmicutes	2.44012	55.8004	chromosome:NZ_CP017042.1/CP017042.1; plasmid unnamed1:NZ_CP017043.1/CP017043.1	-	2	2371	2237	8/31/16	4/13/17	Complete Genome	The Forsyth Institute	SAMN05420587	GCA_001717585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/585/GCA_001717585.1_ASM171758v1	-	W5150
Enterobacter cloacae subsp. cloacae	336306	PRJDB5954	396281	Proteobacteria	Gammaproteobacteria	4.92828	55.8	chromosome:AP018340.1	-	1	-	-	7/28/17	7/28/17	Complete Genome	Saitama Medical University	SAMD00084346	GCA_002356475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/475/GCA_002356475.1_E_cloacae_1.0	-	2016_smu953
Pseudomonas alcaligenes OT 69	1333854	PRJNA202928	202928	Proteobacteria	Gammaproteobacteria	7.02968	66	-	ATCP01	223	6429	6246	8/27/13	4/8/17	Contig	University of Illinois at Chicago	SAMN02471815	GCA_000455385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/385/GCA_000455385.1_ASM45538v1	24092793	OT 69
Aeromonas sp. 159	1216961	PRJNA171603	171603	Proteobacteria	Gammaproteobacteria	3.36084	58.2	-	ALOT01	125	3175	3018	8/20/12	4/17/17	Contig	UNIVERSITY OF MALAYA	SAMN02471851	GCA_000292325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/325/GCA_000292325.1_ASM29232v1	23105081	159
Mycobacterium fortuitum subsp. fortuitum DSM 46621 = ATCC 6841	1214102	PRJNA170443	170443	Terrabacteria group	Actinobacteria	6.34974	66	-	ALQB01	82	6271	5843	9/10/12	3/30/17	Scaffold	KAUST	SAMN02470125	GCA_000295855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/855/GCA_000295855.1_ASM29585v1	23105073	DSM 46621
Pseudoalteromonas ruthenica	151081	PRJNA242743	242743	Proteobacteria	Gammaproteobacteria	4.0664	47.4	-	JXXY01	45	3752	3653	4/1/15	4/10/17	Contig	Technical University of Denmark	SAMN03323938	GCA_000967585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/585/GCA_000967585.1_S3258	25879706	S3258
Planococcus halocryophilus Or1	1005941	PRJNA171367	171367	Terrabacteria group	Firmicutes	3.42681	39.9	-	ANBV01	34	3444	2737	2/28/13	4/10/17	Contig	McGill University	SAMN02470529	GCA_000342445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/445/GCA_000342445.1_PlanoHalo1.0	23389107	Or1
Nocardia soli NBRC 100376	1210097	PRJDB184	171045	Terrabacteria group	Actinobacteria	7.55247	67	-	BDCB01	111	7000	6769	4/1/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00018782	GCA_001613285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/285/GCA_001613285.1_ASM161328v1	-	NBRC 100376
Oscillibacter sp. KLE 1728	1226322	PRJNA173637	173637	Terrabacteria group	Firmicutes	3.59071	59.4	-	AWVN01	148	3639	3390	9/18/13	4/17/17	Scaffold	Washington University	SAMN02436878	GCA_000469425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/425/GCA_000469425.1_ASM46942v1	-	KLE 1728
Enterobacter asburiae	61645	PRJNA314550	314550	Proteobacteria	Gammaproteobacteria	4.6487	55.8	chromosome:CP014993.1	-	1	4834	4725	4/8/16	6/21/16	Complete Genome	"Institute of Pathogen Biology,Chinese Academy Medical Sciences & Peking Union Medical College"	SAMN04538166	GCA_001617645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/645/GCA_001617645.1_ASM161764v1	-	ENIPBJ-CG1
Acidocella sp. 20-63-7	1970304	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	1.51244	63.3	-	NCAL01	176	1506	1426	8/16/17	8/16/17	Scaffold	None	SAMN06622452	GCA_002255455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/455/GCA_002255455.1_ASM225545v1	-	-
Nocardia nova NBRC 15556	1210081	PRJDB168	171040	Terrabacteria group	Actinobacteria	7.84977	67.9	-	BDBN01	198	7203	6852	4/1/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00040661	GCA_001613005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/005/GCA_001613005.1_ASM161300v1	-	NBRC 15556
Leclercia adecarboxylata	83655	PRJNA281531	281531	Proteobacteria	Gammaproteobacteria	4.80392	55.8	chromosome:NZ_CP013990.1/CP013990.1	-	1	4594	4360	1/20/16	4/11/17	Complete Genome	USDA-ARS-USMARC	SAMN04158503	GCA_001518835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/835/GCA_001518835.1_ASM151883v1	-	USDA-ARS-USMARC-60222
Burkholderia pyrrocinia CH-67	1212819	PRJNA171013	171013	Proteobacteria	Betaproteobacteria	8.0497	67.4	-	ALWI01	131	7467	6977	9/17/12	5/18/17	Contig	Yonsei University	SAMN02472145	GCA_000297475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/475/GCA_000297475.1_ASM29747v1	23144399	CH-67
Chelatococcus sp. GW1	1211115	PRJNA170823	170823	Proteobacteria	Alphaproteobacteria	5.20705	68.7	-	ALIQ01	247	4961	4742	7/30/12	5/18/17	Contig	Shanghai Jiao Tong University	SAMN02470948	GCA_000283095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/095/GCA_000283095.1_GW1	-	GW1
Clostridium tyrobutyricum DSM 2637 = ATCC 25755 = JCM 11008	1121342	PRJNA185567	185567	Terrabacteria group	Firmicutes	3.0227	30.8	-	AUCO01	44	3028	2872	7/15/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02440870	GCA_000429805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/805/GCA_000429805.1_ASM42980v1	-	DSM 2637
Halorubrum sp. BV1	1498500	PRJNA246208	246208	Euryarchaeota	Halobacteria	2.76746	66	-	JQKV01	42	2738	2617	8/28/14	3/29/17	Scaffold	DOE Joint Genome Institute	SAMN02787129	GCA_000746205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/205/GCA_000746205.1_ASM74620v1	-	BV1
Parageobacillus caldoxylosilyticus CIC9	1234664	PRJNA175758	175758	Terrabacteria group	Firmicutes	3.82655	44.2	-	AMRO01	82	3837	3623	11/19/12	4/8/17	Contig	KRIBB	SAMN02470176	GCA_000313345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/345/GCA_000313345.1_CIC9_01	-	CIC9
Pseudoxanthomonas sp. J35	935852	PRJNA202352	202352	Proteobacteria	Gammaproteobacteria	3.24577	70.7	-	AZVB01	33	2958	2810	1/3/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02597206	GCA_000513995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/995/GCA_000513995.1_ASM51399v1	-	J35
Pseudomonas psychrophila HA-4	1211112	PRJNA170784	170784	Proteobacteria	Gammaproteobacteria	5.2357	56.4	-	ALJC01	145	4796	4642	7/30/12	5/19/17	Contig	Harbin Institute of Technology	SAMN02469873	GCA_000282975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/975/GCA_000282975.1_ASM28297v1	23012293	HA-4
Gordonia hirsuta DSM 44140 = NBRC 16056	1121927	PRJNA185619	185619	Terrabacteria group	Actinobacteria	3.48946	68.4	-	ATVK01	77	3240	3077	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02440575	GCA_000420685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/685/GCA_000420685.1_ASM42068v1	-	DSM 44140
Nocardia terpenica NBRC 100888	1206738	PRJDB134	170642	Terrabacteria group	Actinobacteria	8.63246	68.3	-	BAGI01	4460	-	-	7/13/12	10/21/15	Contig	National Institute of Technology and Evaluation	SAMD00041786	GCA_000320925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/320/925/GCA_000320925.1_ASM32092v1	-	NBRC 100888
Nocardia otitidiscaviarum IFM 11049	1406858	PRJDB1473	251918	Terrabacteria group	Actinobacteria	7.89556	68.9	-	BATZ01	65	7357	7080	6/10/14	4/9/17	Contig	"Medical Mycology Research Center, Chiba University"	SAMD00036770	GCA_000710895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/895/GCA_000710895.1_ASM71089v1	24884595	IFM 11049
Nocardia cerradoensis	85688	PRJNA381133	381133	Terrabacteria group	Actinobacteria	9.19164	67.7	-	NGAF01	908	8281	7978	7/28/17	8/1/17	Contig	Instituto de Salud Carlos III	SAMN06670805	GCA_002236815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/236/815/GCA_002236815.1_ASM223681v1	-	CNM20130759
Cellvibrio mixtus	39650	PRJNA387183	387183	Proteobacteria	Gammaproteobacteria	4.77389	49.3	-	NHNI01	5	4091	3962	8/24/17	8/27/17	Contig	University of Minnesota	SAMN07141653	GCA_002268635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/635/GCA_002268635.1_ASM226863v1	-	PSBB022
Nocardia carnea	37328	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.50379	67.1	-	JNZF01	61	6858	6640	7/1/14	4/9/17	Contig	University of Illinois	SAMN02645334	GCA_000717405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/405/GCA_000717405.1_ASM71740v1	-	NRRL B-1997
Celeribacter baekdonensis B30	1208323	PRJNA170411	170411	Proteobacteria	Alphaproteobacteria	4.3336	58.3	-	AMRK01	44	4254	4136	9/27/12	5/18/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02471168	GCA_000299875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/875/GCA_000299875.1_ASM29987v1	-	B30
Moorella thermoacetica	1525	PRJNA292083	292083	Terrabacteria group	Firmicutes	2.62335	55.8	chromosome:NZ_CP012370.1/CP012370.1	-	1	2657	2565	8/13/15	4/4/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03964771	GCA_001267435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/435/GCA_001267435.1_ASM126743v1	26450730	DSM 2955
Alistipes onderdonkii	328813	PRJNA377666	377666	FCB group	Bacteroidetes/Chlorobi group	3.48334	58.5	-	NFHB01	17	2849	2755	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473769	GCA_002159215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/215/GCA_002159215.1_ASM215921v1	-	An90
Thioclava sp. F28-4	1915315	PRJNA352380	352380	Proteobacteria	Alphaproteobacteria	4.58017	63.6	-	MPZQ01	70	4354	4211	3/6/17	3/9/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05970070	GCA_002020045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/045/GCA_002020045.1_ASM202004v1	-	F28-4
Parabacteroides gordonii MS-1	1203610	PRJNA170354	170354	FCB group	Bacteroidetes/Chlorobi group	6.79335	44.5	-	AQHW01	8	5389	5202	4/7/15	6/12/17	Scaffold	Broad Institute	SAMN03383453	GCA_000969825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/825/GCA_000969825.1_Para_gord_MS-1_V1	-	MS-1
Nocardia asteroides	1824	PRJEB17472	351679	Terrabacteria group	Actinobacteria	6.95484	69.9	-	FOTX01	25	6352	6190	10/31/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444423	GCA_900114685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/685/GCA_900114685.1_IMG-taxon_2693429866_annotated_assembly	-	DSM 43373
Butyricicoccus pullicaecorum	501571	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.99778	54.5	-	NFKK01	59	2895	2785	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473645	GCA_002160355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/355/GCA_002160355.1_ASM216035v1	-	An180
Hyphomonas sp. T16B2	1280941	PRJNA186148	186148	Proteobacteria	Alphaproteobacteria	3.4187	58.5	-	AWFA01	93	3290	3189	5/6/14	4/9/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02746324	GCA_000682675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/675/GCA_000682675.1_SOAPdenovo_v1.05	27255138	T16B2
Aeromonas media	651	PRJNA260228	260228	Proteobacteria	Gammaproteobacteria	4.61236	61	-	JRBF01	180	4270	4051	9/16/14	4/9/17	Contig	Osaka Ohtani University	SAMN03018686	GCA_000754915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/915/GCA_000754915.1_ASM75491v1	25359918	ARB13
Pseudomonas luteola NBRC 103146	1215106	PRJDB214	171633	Proteobacteria	Gammaproteobacteria	5.39528	55.3	-	BDAE01	104	5030	4866	4/4/17	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046930	GCA_002091675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/675/GCA_002091675.1_ASM209167v1	-	NBRC 103146
Methylobacter sp. UBA2091	1946861	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.97093	49.3	-	DCZF01	105	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454939	GCA_002331285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/285/GCA_002331285.1_ASM233128v1	28894102	-
Methanobacterium formicicum DSM 3637	1204725	PRJNA169610	169610	Euryarchaeota	Methanobacteria	2.68427	38	-	AMPO01	28	2562	2487	10/2/12	4/8/17	Contig	"Deparment of Genetics, University of Seville, Spain"	SAMN02471940	GCA_000302455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/455/GCA_000302455.1_ASM30245v1	23209223	DSM 3637
Kordiimonas gwangyangensis DSM 19435 = JCM 12864	1122137	PRJDB656	243240	Proteobacteria	Alphaproteobacteria	4.07214	57.5	-	BAMR01	44	4019	3488	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00016697	GCA_000616065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/065/GCA_000616065.1_ASM61606v1	-	JCM 12864
Yersinia massiliensis	419257	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.96083	47.6	-	CQBH01	45	4543	4326	3/23/15	4/10/17	Scaffold	SC	SAMEA859927	GCA_001142305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/305/GCA_001142305.1_4840_6_3	-	24070
Aureimonas ureilytica DSM 18598 = NBRC 106430	1121028	PRJNA169815	169815	Proteobacteria	Alphaproteobacteria	5.08718	67.3	-	ARQE01	44	4792	4637	4/25/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02440500	GCA_000382705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/705/GCA_000382705.1_ASM38270v1	-	DSM 18598
Corynebacterium propinquum	43769	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.46677	56.5	-	JVVY01	68	2220	2100	7/10/15	4/10/17	Contig	University of Washington	SAMN03197244	GCA_001052555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/555/GCA_001052555.1_ASM105255v1	26230489	1274_CJEI
Wohlfahrtiimonas chitiniclastica SH04	1261130	PRJNA181186	181186	Proteobacteria	Gammaproteobacteria	2.12389	43.5	-	AOBV01	21	2014	1932	1/31/13	4/8/17	Scaffold	hongweitest	SAMN01821864	GCA_000334955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/955/GCA_000334955.1_WohChit1.0	23558531	SH04
Blautia producta ATCC 27340 = DSM 2950	1121114	PRJNA185563	185563	Terrabacteria group	Firmicutes	6.08866	45.7	-	AUUC01	72	5670	5400	7/19/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440793	GCA_000439125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/125/GCA_000439125.1_ASM43912v1	-	DSM 2950
Saccharomonospora sp. CUA-673	1904969	PRJNA344658	344658	Terrabacteria group	Actinobacteria	5.42112	70	-	MKKE01	85	5225	4101	1/11/17	4/17/17	Contig	"Scripps Institution of Oceanography, UCSD"	SAMN05830213	GCA_001942305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/305/GCA_001942305.1_ASM194230v1	27902408	CUA-673
Legionella shakespearei DSM 23087	1122169	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	3.50705	41.7	-	LNYW01	76	3030	2919	12/15/15	4/11/17	Scaffold	Tel Aviv University	SAMN04274794	GCA_001468025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/025/GCA_001468025.1_ASM146802v1	26752266	ATCC 49655
Corynebacterium pilosum	35756	PRJNA284680	284680	Terrabacteria group	Actinobacteria	2.54801	60.7	-	LDYD01	19	2439	1849	7/1/15	4/10/17	Contig	Universidade Federal do Para	SAMN03731012	GCA_001044155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/155/GCA_001044155.1_ASM104415v1	26958092	CIP103422
Bacteroides propionicifaciens DSM 19291 = JCM 14649	1121099	PRJDB582	243157	FCB group	Bacteroidetes/Chlorobi group	2.62541	38	-	BAJO01	80	2253	1968	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00009459	GCA_000613745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/745/GCA_000613745.1_ASM61374v1	-	JCM 14649
Acinetobacter bouvetii DSM 14964 = CIP 107468	1120925	PRJNA169762	169762	Proteobacteria	Gammaproteobacteria	3.35647	45	-	AREL01	19	3213	3078	4/19/13	4/6/17	Scaffold	DOE Joint Genome Institute	SAMN02441705	GCA_000373725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/725/GCA_000373725.1_ASM37372v1	-	DSM 14964
Porphyromonas bennonis DSM 23058 = JCM 16335	1122971	PRJDB625	243201	FCB group	Bacteroidetes/Chlorobi group	7.52843	46.9	-	BAME01	242	-	-	4/1/14	10/21/15	Contig	The University of Tokyo	SAMD00018419	GCA_000615615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/615/GCA_000615615.1_ASM61561v1	-	JCM 16335
Prevotella paludivivens DSM 17968 = JCM 13650	1122990	PRJDB575	243151	FCB group	Bacteroidetes/Chlorobi group	3.44911	37.4	-	BAJH01	97	2720	2427	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00008813	GCA_000613605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/605/GCA_000613605.1_ASM61360v1	-	JCM 13650
Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896	1121022	PRJNA186535	186535	Proteobacteria	Alphaproteobacteria	5.00554	58.4	-	AWGB01	200	4558	4387	11/6/13	4/9/17	Contig	Indiana University	SAMN02469914	GCA_000495775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/775/GCA_000495775.1_AbenevWGS1.0	24463524	DSM 16100
Simiduia agarivorans SA1 = DSM 21679	1117647	PRJNA74637	74637	Proteobacteria	Gammaproteobacteria	4.30023	55.8	chromosome:NC_018868.3/CP003746.2	-	1	3864	3763	10/16/12	4/8/17	Complete Genome	"Biodiversity Research Center, Academia Sinica,"	SAMN02603035	GCA_000305785.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/785/GCA_000305785.2_ASM30578v2	23405302	SA1 = DSM 21679
Martelella mediterranea DSM 17316	1122214	PRJNA169710	169710	Proteobacteria	Alphaproteobacteria	5.64374	62.4	-	AQWH01	75	5301	5068	4/20/13	5/19/17	Contig	DOE Joint Genome Institute	SAMN02441730	GCA_000376125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/125/GCA_000376125.1_ASM37612v1	-	DSM 17316
Thermococcus cleftensis	163003	PRJNA167371	167371	Euryarchaeota	Thermococci	1.95031	55.8	chromosome:NC_018015.1/CP003651.1	-	1	2104	2033	6/11/12	4/17/17	Complete Genome	Kyung Hee University	SAMN02603492	GCA_000265525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/525/GCA_000265525.1_ASM26552v1	22887670	CL1
Nocardiopsis alba DSM 43377	1245473	PRJNA177997	177997	Terrabacteria group	Actinobacteria	5.82041	69.8	-	ANAC01	55	5131	4991	2/19/13	5/19/17	Contig	"Yunnan Institute of Microbiology, Yunnan University"	SAMN02472146	GCA_000341225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/225/GCA_000341225.1_SOAPdenovo1.06	23626695	DSM 43377
Hoeflea sp. 108	1116369	PRJNA169687	169687	Proteobacteria	Alphaproteobacteria	6.11209	63.4	-	ARCZ01	5	5932	5773	4/19/13	5/18/17	Scaffold	DOE Joint Genome Institute	SAMN02441719	GCA_000372965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/965/GCA_000372965.1_ASM37296v1	-	108
Mariprofundus sp. UBA1536	1946828	PRJNA348753	348753	Proteobacteria	Zetaproteobacteria	2.29037	46.4	-	DCPU01	25	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452924	GCA_002323245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/245/GCA_002323245.1_ASM232324v1	28894102	-
Halomonas titanicae	664683	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	5.21614	54.7	-	DCAQ01	57	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06451852	GCA_002311575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/575/GCA_002311575.1_ASM231157v1	28894102	-
Dermabacter sp. HMSC06F07	1581125	PRJNA269894	269894	Terrabacteria group	Actinobacteria	2.25109	63	-	LWOD01	24	2038	1942	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03433967	GCA_001807345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/345/GCA_001807345.1_ASM180734v1	-	HMSC06F07
Terrisporobacter glycolicus ATCC 14880 = DSM 1288	1121315	PRJNA169799	169799	Terrabacteria group	Firmicutes	4.0018	28.4	-	ARES01	30	3814	3718	4/19/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440434	GCA_000373865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/865/GCA_000373865.1_ASM37386v1	-	ATCC 14880
Pandoraea sp. SD6-2	1286093	PRJNA174277	174277	Proteobacteria	Betaproteobacteria	5.77201	62.5	-	AQOU01	37	5247	5038	5/7/13	4/8/17	Scaffold	CSIRO	SAMN02469694	GCA_000389825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/825/GCA_000389825.1_SD6-2_1.0	23833132	SD6-2
Lactobacillus pasteurii DSM 23907 = CRBIP 24.76	1423790	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.86811	38.5	-	AYZN01	44	1810	1690	11/6/15	4/11/17	Contig	Shanghai Majorbio	SAMN02369411	GCA_001433915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/915/GCA_001433915.1_ASM143391v1	26415554	DSM 23907
Lactobacillus gigeriorum DSM 23908 = CRBIP 24.85	1423751	PRJEB102	169212	Terrabacteria group	Firmicutes	1.92718	36.9	-	CAKC01	96	1931	1768	7/4/12	8/27/17	Contig	Sycou	SAMEA2272557	GCA_000296855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/855/GCA_000296855.1_ASM29685v1	-	type strain: CRBIP 24.85
Lactobacillus hominis DSM 23910 = CRBIP 24.179	1423758	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.92633	35.2	-	AYZP01	47	1880	1789	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369400	GCA_001436125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/125/GCA_001436125.1_ASM143612v1	26415554	DSM 23910
Acidaminococcus fermentans DSM 20731	591001	PRJNA33685	33685	Terrabacteria group	Firmicutes	2.32977	55.8	chromosome:NC_013740.1/CP001859.1	-	1	2164	2040	1/15/10	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598507	GCA_000025305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/305/GCA_000025305.1_ASM2530v1	21304687	DSM 20731
Paenibacillus massiliensis T7	1333859	PRJNA202952	202952	Terrabacteria group	Firmicutes	6.29685	48.4	-	ASSE01	292	5486	5212	1/15/14	4/9/17	Contig	China Agricultural University	SAMN02597341	GCA_000520695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/695/GCA_000520695.1_s7	-	T7
Chlorobaculum parvum NCIB 8327	517417	PRJNA29213	29213	FCB group	Bacteroidetes/Chlorobi group	2.28925	55.8	chromosome:NC_011027.1/CP001099.1	-	1	2138	2047	6/27/08	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598460	GCA_000020505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/505/GCA_000020505.1_ASM2050v1	-	NCIB 8327
Corynebacterium timonense	441500	PRJEB16444	349332	Terrabacteria group	Actinobacteria	2.63319	66.6	chromosome I:NZ_LT629765.1/LT629765.1	-	1	2488	2316	10/21/16	4/13/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04488539	GCA_900105305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/305/GCA_900105305.1_IMG-taxon_2636416018_annotated_assembly	-	DSM 45434
Legionella sp. 40-6	1895903	PRJNA279279	279279	Proteobacteria	Gammaproteobacteria	3.14273	40.3	-	MKVI01	656	3075	2421	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660603	GCA_001899505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/505/GCA_001899505.1_ASM189950v1	-	-
Moritella marina ATCC 15381	1202962	PRJNA169241	169241	Proteobacteria	Gammaproteobacteria	4.63618	40.5	-	ALOE01	83	4098	4031	8/17/12	5/19/17	Contig	Iowa State University	SAMN02470074	GCA_000291685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/685/GCA_000291685.1_ASM29168v1	23105048	ATCC 15381
Rhodopirellula sp. SM50	595453	PRJNA400128	400128	PVC group	Planctomycetes	9.79521	59	-	NTFY01	146	6590	6381	9/11/17	9/13/17	Contig	Max Planck Institute for Marine Microbiology	SAMN07557122	GCA_002289565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/565/GCA_002289565.1_ASM228956v1	-	SM50
Methylopila sp. 73B	1120792	PRJNA195701	195701	Proteobacteria	Alphaproteobacteria	4.38277	69.4	-	JAFV01	2	4135	4024	1/14/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02584929	GCA_000526315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/315/GCA_000526315.1_ASM52631v1	-	73B
Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529	1211035	PRJNA214581	214581	Terrabacteria group	Firmicutes	3.99991	34.7	-	AVCZ01	156	3841	3743	6/19/17	6/22/17	Contig	Huazhong Agricultural University	SAMN07255463	GCA_002200855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/855/GCA_002200855.1_ASM220085v1	-	4400831
Methylotenera sp. 73s	1165096	PRJNA179466	179466	Proteobacteria	Betaproteobacteria	2.60859	41.9	-	ARWF01	1	2452	2397	4/26/13	6/20/17	Contig	DOE Joint Genome Institute	SAMN02441295	GCA_000384435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/435/GCA_000384435.1_ASM38443v1	-	73s
Streptomyces vitaminophilus	76728	PRJNA299399	299399	Terrabacteria group	Actinobacteria	6.54981	72	-	LLZU01	39	5581	5288	11/18/15	3/12/17	Contig	Oak Ridge National Laboratory	SAMN04201512	GCA_001445835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/835/GCA_001445835.1_ASM144583v1	26798098	ATCC 31673
Prevotella nanceiensis DSM 19126 = JCM 15639	1122988	PRJDB594	243170	FCB group	Bacteroidetes/Chlorobi group	2.64747	38.4	-	BAKD01	22	2071	1742	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00015843	GCA_000613985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/985/GCA_000613985.1_ASM61398v1	-	JCM 15639
Streptomyces scabrisporus	159449	PRJNA377273	377273	Terrabacteria group	Actinobacteria	10.9584	71.6	-	MWQN01	8	9487	9026	3/8/17	5/5/17	Contig	UNAM/ Institute of Investigations Biomedicas	SAMN06459519	GCA_002024165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/165/GCA_002024165.1_SSNF3.0	-	NF3
Akkermansia muciniphila ATCC BAA-835	349741	PRJNA20089	20089	PVC group	Verrucomicrobia	2.6641	55.8	chromosome:NC_010655.1/CP001071.1	-	1	2319	2246	5/5/08	4/6/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00138213	GCA_000020225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/225/GCA_000020225.1_ASM2022v1	-	ATCC BAA-835
Porphyromonas somerae	322095	PRJNA272077	272077	FCB group	Bacteroidetes/Chlorobi group	2.35538	55.5	-	LSDK01	62	1855	1768	2/8/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN03854412	GCA_001553215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/215/GCA_001553215.1_ASM155321v1	-	KA00683
Butyricimonas synergistica	544644	PRJNA321218	321218	FCB group	Bacteroidetes/Chlorobi group	4.16741	42.8	-	MNQW01	45	3416	3204	12/23/16	12/23/16	Scaffold	None	SAMN05717228	GCA_001915615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/615/GCA_001915615.1_ASM191561v1	27819664	-
Porphyromonas macacae DSM 20710 = JCM 13914	1122974	PRJDB607	243182	FCB group	Bacteroidetes/Chlorobi group	2.19993	43.6	-	BAKQ01	44	1971	1582	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00016732	GCA_000614325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/325/GCA_000614325.1_ASM61432v1	-	JCM 13914
Rodentibacter pneumotropicus	758	PRJDB2951	255148	Proteobacteria	Gammaproteobacteria	2.43455	39.9	-	BBIX01	9	2312	2131	7/11/14	3/2/17	Contig	Juntendo University	SAMD00018573	GCA_000730685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/685/GCA_000730685.1_ASM73068v1	25103762	ATCC 35149
Oligella urethralis DNF00040	1401065	PRJNA219661	219661	Proteobacteria	Betaproteobacteria	2.4922	46.2	-	JRNI01	171	2333	2218	9/26/14	4/9/17	Contig	J. Craig Venter Institute	SAMN02850962	GCA_000759065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/065/GCA_000759065.1_04_NF40_HMP2130v01	-	DNF00040
Mycobacterium hassiacum DSM 44199	1122247	PRJNA175660	175660	Terrabacteria group	Actinobacteria	5.00016	69.5	-	AMRA01	169	4823	4573	10/1/12	5/19/17	Contig	"CNC-Center for Neuroscience and Cell Biology, University of Coimbra, Portugal"	SAMN02471699	GCA_000300375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/375/GCA_000300375.1_ASM30037v1	23209251	DSM 44199
Loktanella hongkongensis DSM 17492	1122180	PRJNA165403	165403	Proteobacteria	Alphaproteobacteria	3.18591	68.4	-	AQOX01	16	3119	3029	4/12/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02256514	GCA_000365005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/005/GCA_000365005.1_ASM36500v1	-	UST950701-009P
Caldibacillus debilis	301148	PRJNA270597	270597	Terrabacteria group	Firmicutes	3.24726	50.9	-	LQYT01	152	3491	3315	3/11/16	4/12/17	Scaffold	University of Groningen	SAMN03267291	GCA_001587535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/535/GCA_001587535.1_B4135	27151781	B4135
Corynebacterium doosanense CAU 212 = DSM 45436	558173	PRJNA165377	165377	Terrabacteria group	Actinobacteria	2.64734	66.9	-	AQUX01	41	2601	2475	4/19/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02256506	GCA_000372245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/245/GCA_000372245.1_ASM37224v1	-	DSM 45436
Paraburkholderia nodosa	392320	PRJNA337952	337952	Proteobacteria	Betaproteobacteria	8.61403	64.2	-	MCNV01	86	7886	7438	9/2/16	4/13/17	Contig	Embrapa	SAMN05514346	GCA_001718195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/195/GCA_001718195.1_ASM171819v1	-	CNPSo 1341
Rhizobium sullae	50338	PRJEB9435	290600	Proteobacteria	Alphaproteobacteria	7.88958	59.9	-	FWER01	317	7914	7241	3/21/17	5/31/17	Scaffold	IASMA RESEARCH CENTRE - FONDAZIONE EDMUND MACH	SAMEA3402876	GCA_900169785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/785/GCA_900169785.1_ASM90016978v1	-	-
Pseudochrobactrum sp. B5	1289478	PRJNA347528	347528	Proteobacteria	Alphaproteobacteria	4.0527	52.1	-	MOYL01	19	3788	3679	1/9/17	4/16/17	Contig	Wenzhou University	SAMN05891804	GCA_001939785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/785/GCA_001939785.1_ASM193978v1	-	B5
Bacteriovorax sp. BSW11_IV	1353529	PRJNA210325	210325	Proteobacteria	Oligoflexia	3.6501	36.9	-	AUNE01	59	3456	3364	8/16/13	4/8/17	Contig	J. Craig Venter Institute	SAMN02436208	GCA_000447755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/755/GCA_000447755.1_Hybrid_Newbler_filtered	-	BSW11_IV
Moorella thermoacetica ATCC 39073	264732	PRJNA10648	10648	Terrabacteria group	Firmicutes	2.62878	55.8	chromosome:NC_007644.1/CP000232.1	-	1	2610	2460	12/12/05	7/27/17	Complete Genome	DOE Joint Genome Institute	SAMN02598257	GCA_000013105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/105/GCA_000013105.1_ASM1310v1	18631365	ATCC 39073
Alicyclobacillus hesperidum URH17-3-68	1200346	PRJNA168602	168602	Terrabacteria group	Firmicutes	2.96716	53.8	-	AKZN01	78	2909	2767	9/5/12	4/8/17	Contig	"Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences"	SAMN02471209	GCA_000294675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/675/GCA_000294675.1_ASM29467v1	23105079	URH17-3-68
Alicycliphilus sp. BQ1	449664	PRJNA391731	391731	Proteobacteria	Betaproteobacteria	4.67626	69	-	NKDB01	15	4365	4251	8/14/17	8/16/17	Contig	"Facultad de Quimica, Universidad Nacional Autonoma de Mexico"	SAMN07274327	GCA_002250385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/385/GCA_002250385.1_ASM225038v1	-	BQ1
Acinetobacter baylyi DSM 14961 = CIP 107474	1120924	PRJNA221007	221007	Proteobacteria	Gammaproteobacteria	3.60396	40.3	-	JHZI01	27	3380	3261	4/8/14	4/6/17	Scaffold	DOE Joint Genome Institute	SAMN02743981	GCA_000621045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/045/GCA_000621045.1_ASM62104v1	-	DSM 14961
Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223	1121098	PRJNA170352	170352	FCB group	Bacteroidetes/Chlorobi group	4.64621	42.8	-	AQHY01	15	3982	3829	4/23/13	4/8/17	Scaffold	Broad Institute	SAMN02596944	GCA_000382445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/445/GCA_000382445.1_Bact_mass_DSM_17679_V1	-	DSM 17679
Thermoanaerobacter thermohydrosulfuricus	1516	PRJEB15844	347795	Terrabacteria group	Firmicutes	2.68359	34.1	-	FNBS01	158	2827	2528	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04244560	GCA_900102395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/395/GCA_900102395.1_IMG-taxon_2597490338_annotated_assembly	-	DSM 569
Marinobacter lipolyticus BF04_CF-4	1046724	PRJNA165567	165567	Proteobacteria	Gammaproteobacteria	3.6338	54.7	-	ARCR01	136	3686	3177	4/19/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02256466	GCA_000372805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/805/GCA_000372805.1_ASM37280v1	-	BF04_CF-4
Pseudomonas marginalis	298	PRJEB16449	349327	Proteobacteria	Gammaproteobacteria	7.27132	60.6	-	FNSU01	4	6791	6497	10/22/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04490193	GCA_900105325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/325/GCA_900105325.1_IMG-taxon_2639762561_annotated_assembly	-	BS2952
Paraburkholderia terrae NBRC 100964	1218084	PRJDB257	172080	Proteobacteria	Betaproteobacteria	9.92578	62	-	BBJK01	247	8970	8686	7/25/14	4/9/17	Contig	National Institute of Technology and Evaluation	SAMD00017344	GCA_000739835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/835/GCA_000739835.1_ASM73983v1	-	NBRC 100964
Enterobacter cloacae	550	PRJNA374469	374469	Proteobacteria	Gammaproteobacteria	4.99301	55.7595	chromosome:NZ_CP019839.1/CP019839.1; plasmid pASM1:NZ_CP019840.1/CP019840.1; plasmid pASM2:NZ_CP019841.1/CP019841.1; plasmid pASM3:NZ_CP019842.1/CP019842.1; plasmid pASM4:NZ_CP019843.1/CP019843.1	-	5	4848	4601	2/28/17	4/20/17	Complete Genome	Shandong Academy of Medical Sciences	SAMN06323809	GCA_002007805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/805/GCA_002007805.1_ASM200780v1	-	R11
Bacillus oceanisediminis	665099	PRJNA328598	328598	Terrabacteria group	Firmicutes	5.88337	40.8	-	MBRJ01	79	5987	5760	10/28/16	4/13/17	Contig	institute of microbial technology	SAMN05363639	GCA_001856025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/025/GCA_001856025.1_ASM185602v1	-	Bhandara28
Bacillus endophyticus 2102	1196029	PRJNA167765	167765	Terrabacteria group	Firmicutes	5.10719	36.4	-	ALIM01	54	5064	4937	7/31/12	6/15/17	Contig	KRIBB	SAMN02470187	GCA_000283255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/255/GCA_000283255.1_BE01	23012284	2102
Virgibacillus halodenitrificans 1806	1196028	PRJNA167764	167764	Terrabacteria group	Firmicutes	3.92055	37.4	-	ALEF01	92	3865	3780	9/6/12	4/8/17	Contig	KRIBB	SAMN02470180	GCA_000294755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/755/GCA_000294755.1_VH01	23105070	1806
Streptococcus massiliensis 4401825	1194208	PRJEB449	177102	Terrabacteria group	Firmicutes	1.83689	41.6	-	CANO01	105	1857	1779	2/5/13	4/8/17	Contig	URMITE	SAMEA2272146	GCA_000341525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/525/GCA_000341525.1_ASM34152v1	-	4401825
Cronobacter condimenti 1330	1073999	PRJNA291037	291037	Proteobacteria	Gammaproteobacteria	4.49948	55.7394	chromosome:NZ_CP012264.1/CP012264.1; plasmid pCCO1:NZ_CP012265.1/CP012265.1	-	2	4302	4052	9/1/15	4/11/17	Complete Genome	Nestle Institute of Health Sciences	SAMN03938712	GCA_001277255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/255/GCA_001277255.1_ASM127725v1	27013041	LMG 26250
Snodgrassella alvi	1196083	PRJNA339423	339423	Proteobacteria	Betaproteobacteria	2.4985	41	-	MVDP01	65	2285	2186	3/6/17	3/9/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603551	GCA_002019415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/415/GCA_002019415.1_ASM201941v1	-	Aw-20
Enterobacter cloacae	550	PRJNA391277	391277	Proteobacteria	Gammaproteobacteria	5.05159	55.7309	chromosome:NZ_CP022148.1/CP022148.1; plasmid p704SK10_1:NZ_CP022149.1/CP022149.1; plasmid p704SK10_2:NZ_CP022150.1/CP022150.1	-	3	4975	4689	6/30/17	7/3/17	Complete Genome	University of Zurich	SAMN07260410	GCA_002211685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/685/GCA_002211685.1_ASM221168v1	-	704SK10
Rhodococcus wratislaviensis NBRC 100605	1219028	PRJDB307	172275	Terrabacteria group	Actinobacteria	10.4033	66.8	-	BAWF01	151	9514	8883	3/1/14	4/9/17	Contig	National Institute of Technology and Evaluation	SAMD00041784	GCA_000583735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/735/GCA_000583735.1_ASM58373v1	-	NBRC 100605
Pseudomonas alcaliphila 34	1248438	PRJNA178463	178463	Proteobacteria	Gammaproteobacteria	5.42896	62.6	-	ANGB01	18	5052	4923	12/12/12	5/19/17	Contig	University of Florence	SAMN02471757	GCA_000319815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/815/GCA_000319815.1_Psalc341.0	23469336	34
Mycobacterium vaccae ATCC 25954	1194972	PRJNA167528	167528	Terrabacteria group	Actinobacteria	6.24537	68.5	-	ALQA01	33	6005	5733	9/10/12	5/19/17	Scaffold	KAUST	SAMN02470132	GCA_000295825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/825/GCA_000295825.1_ASM29582v1	23105074	ATCC 25954
Leptospira sp. Fiocruz LV4135	1193013	PRJNA167241	167241	Spirochaetes	Spirochaetia	4.00239	41.7	-	AOHI01	133	4057	3717	3/14/13	4/17/17	Contig	J. Craig Venter Institute	SAMN01886732	GCA_000346675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/675/GCA_000346675.1_gls454076v02	-	Fiocruz LV4135
Leptospira meyeri serovar Semaranga str. Veldrot Semarang 173	1218585	PRJNA177157	177157	Spirochaetes	Spirochaetia	4.10361	38.1	-	ANIL01	31	3920	3808	3/15/13	4/8/17	Contig	J. Craig Venter Institute	SAMN01801605	GCA_000347075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/075/GCA_000347075.1_gls454196v01	-	Veldrot Semarang 173
Sphingobium xenophagum QYY	1192759	PRJNA167136	167136	Proteobacteria	Alphaproteobacteria	4.22111	63.1	-	AKIB01	129	4058	3923	7/10/12	5/19/17	Contig	"School of Environmental Science and Technology, Dalian University of Technology"	SAMN02470887	GCA_000277525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/525/GCA_000277525.1_ASM27752v1	23405319	QYY
Flammeovirga sp. OC4	1382345	PRJNA267023	267023	FCB group	Bacteroidetes/Chlorobi group	8.0655	34.9	-	JTAM01	214	5966	5807	12/31/14	4/10/17	Contig	85303	SAMN03177400	GCA_000812565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/565/GCA_000812565.1_ASM81256v1	-	OC4
Acinetobacter venetianus RAG-1 = CIP 110063	1191460	PRJNA183297	183297	Proteobacteria	Gammaproteobacteria	3.45826	39.1	-	APPO01	5	3303	3165	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN01087854	GCA_000368585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/585/GCA_000368585.1_Acin_vene_CIP_110063_V1	-	CIP 110063
Aliivibrio logei 5S-186	626086	PRJNA164729	164729	Proteobacteria	Gammaproteobacteria	4.45154	39	-	AJYJ02	145	3984	3898	8/13/12	4/13/17	Scaffold	MIT	SAMN02470497	GCA_000286935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/935/GCA_000286935.2_ASM28693v2	22955834	5S-186
Vibrio tasmaniensis 5F-79	1191325	PRJNA167049	167049	Proteobacteria	Gammaproteobacteria	5.20544	43.9	-	AJZP01	370	4800	4465	6/25/12	5/19/17	Contig	Broad Institute	SAMN02470485	GCA_000272425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/425/GCA_000272425.1_Vib-5F-79	22955834	5F-79
Staphylococcus massiliensis S46	1229783	PRJNA174311	174311	Terrabacteria group	Firmicutes	2.44711	36.3	-	AMSQ01	64	2389	2266	11/26/12	4/8/17	Contig	Institute of Genomics and Integrative Biology	SAMN02469970	GCA_000314555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/555/GCA_000314555.1_ASM31455v1	23929469	S46
Nitratireductor aquibiodomus RA22	1189611	PRJNA165171	165171	Proteobacteria	Alphaproteobacteria	4.59279	61.3	-	AJXZ01	95	4401	3760	6/4/12	5/19/17	Contig	Institute of Genomics and Integrative Biology	SAMN02469968	GCA_000265055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/055/GCA_000265055.1_ASM26505v1	23105054	RA22
Vibrio genomosp. F10 str. 9ZD137	1187846	PRJNA164823	164823	Proteobacteria	Gammaproteobacteria	4.26766	43.5	-	AJYO02	1077	4133	3413	8/13/12	4/13/17	Scaffold	MIT	SAMN02470439	GCA_000287015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/015/GCA_000287015.2_ASM28701v2	22955834	9ZD137
Vibrio crassostreae 9CS106	1191300	PRJNA167005	167005	Proteobacteria	Gammaproteobacteria	5.07119	44.5	-	AJYY01	189	4492	4348	6/25/12	5/19/17	Contig	Broad Institute	SAMN02470456	GCA_000272185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/185/GCA_000272185.1_VibCrassostreae-9CS106	22955834	9CS106
Rhodovulum sulfidophilum	35806	PRJNA345612	345612	Proteobacteria	Alphaproteobacteria	4.38075	67.9	-	MSYQ01	3	4234	4028	1/10/17	4/6/17	Scaffold	"Department of Biology, Washington University in St. Louis"	SAMN05876236	GCA_001941715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/715/GCA_001941715.1_ASM194171v1	-	AB26
Vibrio breoganii 1C10	1205908	PRJNA169653	169653	Proteobacteria	Gammaproteobacteria	4.14624	45.1	-	AKXW02	169	3772	3617	7/23/12	4/13/17	Scaffold	MIT	SAMN02470512	GCA_000280885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/885/GCA_000280885.2_ASM28088v2	-	1C10
Vibrio rumoiensis	76258	PRJDB5783	391150	Proteobacteria	Gammaproteobacteria	3.99941	42.3	-	BDSE01	47	3657	3482	6/16/17	7/15/17	Scaffold	"Laboratory of Microbiology, Division of Marine Life Science, Faculty of Fisheries Sciences, Hokkaido University"	SAMD00080447	GCA_002218045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/045/GCA_002218045.1_ASM221804v1	28662104	FERM P-14531
Ureaplasma diversum	42094	PRJNA257677	257677	Terrabacteria group	Tenericutes	0.973501	28.2	chromosome:CP009770.1	-	1	759	641	3/4/15	6/2/15	Chromosome	ureaplasma diversum USP-UFBA-Purdue University	SAMN03153602	GCA_000941095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/095/GCA_000941095.1_ASM94109v1	-	ATCC 49782
Enterovibrio calviensis FF-85	617126	PRJNA164637	164637	Proteobacteria	Gammaproteobacteria	5.49145	47.7	-	AJYF02	376	4855	4662	8/13/12	4/13/17	Scaffold	MIT	SAMN02470494	GCA_000286875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/875/GCA_000286875.2_ASM28687v2	22955834	FF-85
Eikenella corrodens	539	PRJEB6403	251923	Proteobacteria	Betaproteobacteria	2.19258	55.7	chromosome 1:NZ_LT906482.1/LT906482.1	-	1	2200	2063	8/15/17	8/28/17	Complete Genome	SC	SAMEA4412678	GCA_900187105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/105/GCA_900187105.1_50618_F01	-	NCTC10596
Gluconobacter frateurii M-2	1231354	PRJDB503	174854	Proteobacteria	Alphaproteobacteria	3.24864	56.4	-	BANG01	147	3055	2916	3/20/15	4/10/17	Scaffold	Kinki University	SAMD00036642	GCA_000964445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/445/GCA_000964445.1_ASM96444v1	-	M-2
Mycoplasma arginini ATCC 23838	1266999	PRJNA183039	183039	Terrabacteria group	Tenericutes	0.758854	28	-	AUAH01	28	702	626	7/15/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441558	GCA_000428625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/625/GCA_000428625.1_ASM42862v1	-	ATCC 23838
Haemophilus parahaemolyticus G321	1430896	PRJEB7536	264043	Proteobacteria	Gammaproteobacteria	2.03777	40.1	-	CDBC01	27	1979	1693	11/4/14	4/10/17	Contig	URMITE	SAMEA3105057	GCA_000826045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/045/GCA_000826045.1_Haemophilus_parahaemolyticus_G321	-	G321
Gallionella sp. SCGC AAA018-N21	1131291	PRJNA165243	165243	Proteobacteria	Betaproteobacteria	1.39611	49.9	-	ARAT01	137	-	-	4/22/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02256456	GCA_000379385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/385/GCA_000379385.1_ASM37938v1	-	SCGC AAA018-N21
Thermococcus sp. 5-4	2008440	PRJNA389376	389376	Euryarchaeota	Thermococci	1.85491	55.7	chromosome:NZ_CP021848.1/CP021848.1	-	1	2018	1961	6/16/17	6/21/17	Complete Genome	Institute de Biologie Intégrative de la Cellule	SAMN07196561	GCA_002197185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/185/GCA_002197185.1_ASM219718v1	28628615	4-May
Wenxinia marina DSM 24838	1123501	PRJNA183669	183669	Proteobacteria	Alphaproteobacteria	4.18093	70.5048	plasmid pWENMAR1:NZ_CM003137.1/CM003137.1	AONG01	8	4026	3796	2/12/15	4/10/17	Scaffold	Leibniz Institute DSMZ Braunschweig	SAMN03329042	GCA_000836695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/836/695/GCA_000836695.1_ASM83669v1	-	DSM 24838
Variovorax sp. HW608	1034889	PRJEB14438	325918	Proteobacteria	Betaproteobacteria	7.73367	66.5	chromosome I:NZ_LT607803.1/LT607803.1	-	1	7317	7077	8/16/16	7/11/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN02745862	GCA_900090195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/090/195/GCA_900090195.1_IMG-taxon_2512047091_annotated_assembly	-	HW608
Verrucomicrobium sp. BvORR034	1396418	PRJDB1468	254384	PVC group	Verrucomicrobia	8.57651	60.5	-	BATQ01	200	6898	6589	7/3/14	4/9/17	Contig	"Hokkaido Agricultural Research Center, National Agriculture and Food Research Organization."	SAMD00036767	GCA_000739635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/635/GCA_000739635.1_ASM73963v1	-	-
Austwickia chelonae	100225	PRJEB17050	351179	Terrabacteria group	Actinobacteria	3.54434	66.2	-	FOJD01	9	3071	2997	10/29/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421595	GCA_900111385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/385/GCA_900111385.1_IMG-taxon_2687453746_annotated_assembly	-	DSM 44178
Planococcus antarcticus DSM 14505	1185653	PRJNA163681	163681	Terrabacteria group	Firmicutes	3.77211	43	-	AJYB01	160	3731	3529	5/24/12	4/7/17	Contig	IPLA-CSIC	SAMN02470076	GCA_000264415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/415/GCA_000264415.1_ASM26441v1	22843594	DSM 14505
Propionimicrobium sp. BV2F7	1111131	PRJNA89641	89641	Terrabacteria group	Actinobacteria	2.02797	56.1	-	AZIS01	6	1857	1771	12/18/13	4/9/17	Contig	JCVI	SAMN00829146	GCA_000510445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/510/445/GCA_000510445.1_PspBV2F7v1.0	-	BV2F7
Raoultella ornithinolytica	54291	PRJNA350352	350352	Proteobacteria	Gammaproteobacteria	5.71936	55.7	chromosome:NZ_CP017802.1/CP017802.1	-	1	5511	5225	11/4/16	4/5/17	Complete Genome	YEUNGNAM UNIVERSITY	SAMN05938422	GCA_001866535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/535/GCA_001866535.1_ASM186653v1	-	MG
Thiomicrospira sp. Kp2	1123518	PRJNA165233	165233	Proteobacteria	Gammaproteobacteria	2.72571	39.9	-	ARWI01	1	2502	2435	4/26/13	4/9/17	Contig	DOE Joint Genome Institute	SAMN02256393	GCA_000478585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/585/GCA_000478585.1_ASM47858v1	-	Kp2
Enterovibrio norvegicus FF-454	1185651	PRJNA164629	164629	Proteobacteria	Gammaproteobacteria	5.00181	47.3	-	AJWN02	112	4430	4291	5/24/12	4/13/17	Scaffold	MIT	SAMN02470459	GCA_000264435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/435/GCA_000264435.2_ASM26443v2	22955834	FF-454
Micavibrio sp. TMED27	1986607	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	2.50106	42.4	-	NHCG01	22	2482	2414	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971881	GCA_002167715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/715/GCA_002167715.1_ASM216771v1	-	-
Rickettsia sp. MEAM1 (Bemisia tabaci)	1182263	PRJNA162635	162635	Proteobacteria	Alphaproteobacteria	1.22153	32.2	-	AJWD02	219	1244	1023	6/6/12	4/17/17	Contig	"Zhejiang University, China"	SAMN02709030	GCA_000265225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/225/GCA_000265225.2_ASM26522v2	22887655	MEAM1 (Bemisia tabaci)
Xanthobacter sp. 91	1117244	PRJNA165239	165239	Proteobacteria	Alphaproteobacteria	5.33952	68.1	-	JNIB01	1	4940	4806	6/11/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02583746	GCA_000702385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/385/GCA_000702385.1_ASM70238v1	-	91
Microcystis sp. LSC13-02	1895004	PRJNA340134	340134	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.27668	42.3	-	MTBT01	338	-	-	8/31/17	8/31/17	Scaffold	University of Michigan	SAMN05645814	GCA_002282935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/935/GCA_002282935.1_ASM228293v1	-	-
Pontibacter sp. S10-8	1797110	PRJNA316648	316648	FCB group	Bacteroidetes/Chlorobi group	4.62379	53.6	-	LVWA01	13	3942	3854	12/16/16	4/16/17	Contig	"Agricultural Culture Collection of China (ACCC), Institute of Agricultural Resources and Regional Planning"	SAMN04589127	GCA_001907195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/195/GCA_001907195.1_ASM190719v1	-	S10-8
Bordetella sp. N	1746199	PRJNA300328	300328	Proteobacteria	Betaproteobacteria	6.9897	64.8	chromosome:NZ_CP013111.1/CP013111.1	-	1	6138	5955	11/5/15	4/11/17	Chromosome	BioInformatics Center	SAMN04219331	GCA_001433395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/395/GCA_001433395.1_ASM143339v1	-	N
Akkermansia muciniphila	239935	PRJNA317592	317592	PVC group	Verrucomicrobia	2.74528	55.7	chromosome:NZ_CP015409.2/CP015409.2	-	1	2413	2333	7/20/16	4/17/17	Complete Genome	University of Bern	SAMN04621615	GCA_001688765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/765/GCA_001688765.2_ASM168876v2	-	YL44
Cycloclasticus sp. PY97M	522456	PRJNA200548	200548	Proteobacteria	Gammaproteobacteria	2.35962	41.9	-	ASHL01	28	2280	2224	6/11/13	4/17/17	Scaffold	"First Institute of Oceanography, State Oceanic Administration of China"	SAMN02469787	GCA_000444935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/935/GCA_000444935.1_ASM44493v1	23908283	PY97M
Serratia plymuthica PRI-2C	1154756	PRJNA84283	84283	Proteobacteria	Gammaproteobacteria	5.47469	55.7	chromosome:NZ_CP015613.1/CP015613.1	-	1	5164	4929	7/15/16	4/5/17	Complete Genome	NIOO-KNAW	SAMN02470676	GCA_000261045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/045/GCA_000261045.2_ASM26104v2	22815440	PRI-2c
Oceanicaulis sp. HL-87	1479238	PRJNA243962	243962	Proteobacteria	Alphaproteobacteria	2.74397	63	-	JQMZ01	1	2634	2566	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02745092	GCA_000744995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/995/GCA_000744995.1_ASM74499v1	-	HL-87
Phyllobacterium sp. UNC302MFCol5.2	1449065	PRJNA234912	234912	Proteobacteria	Alphaproteobacteria	4.72925	58.9	-	JMLL01	18	4529	4394	5/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743365	GCA_000686005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/005/GCA_000686005.1_ASM68600v1	-	UNC302MFCol5.2
Brevibacterium sp. HMSC24B04	1581060	PRJNA269829	269829	Terrabacteria group	Actinobacteria	2.40491	62.4	-	LWOU01	63	2193	2093	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436210	GCA_001806835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/835/GCA_001806835.1_ASM180683v1	-	HMSC24B04
Cellulomonas sp. URHD0024	1302620	PRJNA192510	192510	Terrabacteria group	Actinobacteria	4.46755	71.4	-	AUEW01	23	4087	3953	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440638	GCA_000426185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/185/GCA_000426185.1_ASM42618v1	-	URHD0024
Enterobacter sp. E20	1560339	PRJNA263377	263377	Proteobacteria	Gammaproteobacteria	4.76311	55.7	chromosome:NZ_CP012999.1/CP012999.1	-	1	4626	4387	10/26/15	4/11/17	Complete Genome	Chinese Academy of Agricultural Sciences	SAMN03099801	GCA_000801755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/755/GCA_000801755.2_ASM80175v2	-	E20
Methylobacillus flagellatus KT	265072	PRJNA10647	10647	Proteobacteria	Betaproteobacteria	2.97152	55.7	chromosome:NC_007947.1/CP000284.1	-	1	2815	2715	4/10/06	7/25/17	Complete Genome	DOE Joint Genome Institute	SAMN02598256	GCA_000013705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/705/GCA_000013705.1_ASM1370v1	-	KT
Akkermansia sp. KLE1798	1574265	PRJNA268325	268325	PVC group	Verrucomicrobia	3.11373	56.9	-	LTZM01	40	2622	2516	3/4/16	4/12/17	Scaffold	The Genome Institute at Washington University	SAMN03956447	GCA_001580195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/195/GCA_001580195.1_ASM158019v1	-	KLE1798
Corynebacterium casei LMG S-19264	1285583	PRJNA186910	186910	Terrabacteria group	Actinobacteria	3.13221	55.6977	chromosome:NZ_CP004350.1/CP004350.1; plasmid pCASE2:NZ_CP004352.1/CP004352.1; plasmid pCASE1:NZ_CP004351.1/CP004351.1	-	3	2872	2704	2/5/14	4/9/17	Complete Genome	"CeBiTec, Bielefeld University"	SAMN03081454	GCA_000550785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/785/GCA_000550785.1_ASM55078v1	-	LMG S-19264
Sediminibacterium sp. UBA657	1947456	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.92378	35.9	-	DBOB01	31	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455001	GCA_002299885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/885/GCA_002299885.1_ASM229988v1	28894102	-
Spirochaeta sp. EBM-43	1918502	PRJNA315143	315143	Spirochaetes	Spirochaetia	3.25395	50.8	-	MPPB01	160	-	-	12/9/16	12/9/16	Contig	UC Berkeley	SAMN06019039	GCA_001896735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/735/GCA_001896735.1_ASM189673v1	-	-
Atopobium sp. oral taxon 810 str. F0209	1321773	PRJNA198876	198876	Terrabacteria group	Actinobacteria	1.94755	49.1	-	AWSK01	38	1746	1659	9/11/13	4/17/17	Scaffold	Washington University	SAMN02436885	GCA_000466405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/405/GCA_000466405.1_ASM46640v1	-	F0209
Sulfurimonas sp. GWF2_37_8	1802250	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.90629	36.7	-	MIBW01	101	1968	1761	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314140	GCA_001829625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/625/GCA_001829625.1_ASM182962v1	27774985	-
Enterobacter cloacae complex sp. 35734	1870930	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.2769	55.6738	chromosome 1:NZ_CP012162.1/CP012162.1; plasmid p35734-109.753kb:NZ_CP012163.1/CP012163.1; plasmid p35734-141.404kb:NZ_CP010360.2/CP010360.2; plasmid p35734-8.452kb:NZ_CP012164.1/CP012164.1	-	4	5156	4815	8/4/15	4/20/17	Complete Genome	JCVI	SAMN03067419	GCA_000807415.4	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/415/GCA_000807415.4_ASM80741v4	-	35734
Klebsiella oxytoca KONIH1	1333852	PRJNA202895	202895	Proteobacteria	Gammaproteobacteria	6.6849	55.6381	chromosome:NZ_CP008788.1/CP008788.1; plasmid pKOX-137:NZ_CP008789.1/CP008789.1; plasmid pKOX-86d:NZ_CP008790.1/CP008790.1; plasmid pKPC-727:NZ_CP008791.1/CP008791.1	-	4	6667	6306	6/27/14	2/21/17	Complete Genome	NISC	SAMN02786843	GCA_000714655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/655/GCA_000714655.1_ASM71465v1	-	KONIH1
Pyrobaculum sp. OCT_11	1714259	PRJNA295311	295311	TACK group	Crenarchaeota	1.00881	56.7	-	LOBY01	151	1203	809	1/15/16	1/15/16	Scaffold	Montana State University	SAMN04045696	GCA_001515825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/825/GCA_001515825.1_ASM151582v1	-	-
uncultured Sporomusa sp.	307249	PRJEB14295	390584	Terrabacteria group	Firmicutes	5.02065	47.3	chromosome KL86SPO:LT608335.1	FMJE01	1	9584	9164	6/14/17	6/14/17	Chromosome	Genoscope CEA	SAMEA4384535	GCA_900095405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/405/GCA_900095405.1_APW_KL86PLE1_v1	-	-
Mitsuaria sp. HZ7	2008677	PRJNA389471	389471	Proteobacteria	Betaproteobacteria	6.50236	68.5	-	NIOE01	37	5764	5630	6/22/17	6/24/17	Contig	Northwest A&F University	SAMN07200918	GCA_002205125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/125/GCA_002205125.1_ASM220512v1	-	HZ7
Aciduliprofundum sp. JdFR-44	1935017	PRJNA269163	269163	Euryarchaeota	unclassified Euryarchaeota	0.51942	54.7	-	MTNF01	139	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226361	GCA_002010375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/375/GCA_002010375.1_ASM201037v1	28350381	-
Paenisporosarcina sp. TG20	1211706	PRJNA170891	170891	Terrabacteria group	Firmicutes	4.11538	36.6	-	ALJG01	365	3826	3605	8/10/12	6/15/17	Contig	Korea Polar Research Institute	SAMN02470170	GCA_000286315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/315/GCA_000286315.1_ASM28631v1	23144390	TG20
Xanthomonas sp. Leaf131	1736270	PRJNA297956	297956	Proteobacteria	Gammaproteobacteria	5.16909	64	-	LMOG01	22	4472	4213	11/2/15	4/6/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151650	GCA_001423495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/495/GCA_001423495.1_Leaf131	26633631	Leaf131
Alicyclobacillus sp. RIFOXYA1_FULL_53_8	1797236	PRJNA288027	288027	Terrabacteria group	Firmicutes	2.64696	51.3	-	MELW01	363	2754	1936	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314322	GCA_001767765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/765/GCA_001767765.1_ASM176776v1	27774985	-
Sedimentibacter sp. SX930	1955060	PRJNA371679	371679	Terrabacteria group	Firmicutes	3.1317	46.8	-	MUZD01	37	2957	2853	5/22/17	5/24/17	Contig	Chinese Academy of Sciences	SAMN06310876	GCA_002155105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/105/GCA_002155105.1_ASM215510v1	-	SX930
Kurthia sp. Dielmo	1033738	PRJEA70549	70549	Terrabacteria group	Firmicutes	0.921043	39.3	-	CAEP01	1	882	849	7/23/12	4/17/17	Scaffold	laboratoire URMITE CNRS 6236	SAMEA2272405	GCA_000307285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/285/GCA_000307285.1_ASM30728v1	-	type strain: Dielmo
Oceanobacillus sp. E9	1742575	PRJNA299405	299405	Terrabacteria group	Firmicutes	3.84014	35.1	-	LSNA01	12	3861	3735	9/21/16	4/18/17	Contig	BVBGR	SAMN04202318	GCA_001741975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/741/975/GCA_001741975.1_ASM174197v1	-	E9
Anaerococcus sp. HMSC065G05	1739356	PRJNA300006	300006	Terrabacteria group	Firmicutes	1.92525	29.2	-	LTEJ01	55	1890	1728	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477661	GCA_001812365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/365/GCA_001812365.1_ASM181236v1	-	HMSC065G05
Ectothiorhodospira sp. PHS-1	519989	PRJNA68693	68693	Proteobacteria	Gammaproteobacteria	2.94321	63.7	-	AGBG01	114	2773	2616	9/1/11	4/17/17	Contig	UC Santa Cruz	SAMN02471617	GCA_000225005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/005/GCA_000225005.2_PHS-1-454	-	PHS-1
Pseudogulbenkiania sp. MAI-1	990370	PRJNA82805	82805	Proteobacteria	Betaproteobacteria	4.33979	64.2	-	AZUR01	1	4047	3869	1/3/14	4/17/17	Contig	JGI	SAMN02597196	GCA_000527175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/175/GCA_000527175.1_ASM52717v1	-	MAI-1
Aeromicrobium sp. Leaf272	1736317	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.47727	71.6	-	LMMY01	16	3394	3132	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151707	GCA_001422865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/865/GCA_001422865.1_Leaf272	26633631	Leaf272
Chromobacterium sp. LK11	1628212	PRJNA277403	277403	Proteobacteria	Betaproteobacteria	5.06974	65	-	LDUR01	71	4556	4419	6/30/15	4/10/17	Contig	University of Malaya	SAMN03392529	GCA_001043705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/705/GCA_001043705.1_ASM104370v1	-	LK11
Nesterenkonia sp. AN1	652017	PRJNA238302	238302	Terrabacteria group	Actinobacteria	3.04013	67.4	-	JEMO01	42	2834	2546	2/25/14	4/17/17	Contig	University of Pretoria	SAMN02642027	GCA_000582475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/475/GCA_000582475.1_NestAN1.1	24675854	AN1
Acidiphilium sp. JA12-A1	1464546	PRJNA238988	238988	Proteobacteria	Alphaproteobacteria	4.18289	66.9	-	JFHO01	296	3999	3601	5/20/14	4/11/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02666715	GCA_000724705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/705/GCA_000724705.2_ASM72470v2	26380040	JA12-A1
Leuconostoc sp. BM2	1914995	PRJNA352317	352317	Terrabacteria group	Firmicutes	2.04866	39	-	MOWQ01	147	2146	1948	4/18/17	4/21/17	Contig	Norwegian University of Life Sciences	SAMN05969705	GCA_002095565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/565/GCA_002095565.1_ASM209556v1	-	BM2
Oceanicola sp. HL-35	1305735	PRJNA195667	195667	Proteobacteria	Alphaproteobacteria	4.31057	63.9	-	JAFT01	8	4216	4020	1/14/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02584927	GCA_000526275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/275/GCA_000526275.1_ASM52627v1	-	HL-35
Hyphomicrobium sp. 99	1163419	PRJNA185289	185289	Proteobacteria	Alphaproteobacteria	4.10831	59.5	-	ARWG02	3	3920	3814	4/26/13	4/10/17	Scaffold	DOE Joint Genome Institute	SAMN02194552	GCA_000384335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/335/GCA_000384335.2_ASM38433v2	-	99
Idiomarina sp. A28L	1036674	PRJNA67347	67347	Proteobacteria	Gammaproteobacteria	2.59157	45.5	-	AFPO01	28	2343	2274	6/16/11	4/17/17	Contig	Institute of Genomics and Integrative Biology	SAMN02469973	GCA_000218785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/785/GCA_000218785.2_A28LD_1.0	21742887	A28L
Thermococcus radiotolerans	187880	PRJNA274230	274230	Euryarchaeota	Thermococci	1.86899	55.6	chromosome:NZ_CP015106.1/CP015106.1	-	1	2051	1984	7/5/17	7/7/17	Complete Genome	Ecole Normale Superieure de Lyon	SAMN03324164	GCA_002214565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/565/GCA_002214565.1_ASM221456v1	-	EJ2
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.78248	55.6	chromosome:NZ_CP017179.1/CP017179.1	-	1	4622	4412	9/16/16	3/28/17	Complete Genome	JCVI	SAMN05581751	GCA_001729725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/725/GCA_001729725.1_ASM172972v1	-	DSM 16691
Nitrospina sp. AB-629-B06	1131270	PRJNA165595	165595	Nitrospinae/Tectomicrobia group	Nitrospinae	1.62623	39.5	-	AQVU01	361	-	-	4/20/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02256481	GCA_000375745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/745/GCA_000375745.1_ASM37574v1	-	AB-629-B06
Nitrosopumilus sp. SJ	1027374	PRJNA66413	66413	TACK group	Thaumarchaeota	1.65082	34.2	-	AJVI01	15	1963	1853	12/31/12	4/17/17	Contig	Chungbuk National University	SAMN02469589	GCA_000328945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/945/GCA_000328945.1_NSJ	-	SJ
Rheinheimera sp. KL1	1635005	PRJNA279418	279418	Proteobacteria	Gammaproteobacteria	4.29506	46.4	-	LAMX01	49	3957	3702	8/26/15	4/11/17	Contig	University of Regina	SAMN03447206	GCA_001275035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/035/GCA_001275035.1_ASM127503v1	26450742	KL1
Lacinutrix sp. Hel_I_90	1249999	PRJNA251769	251769	FCB group	Bacteroidetes/Chlorobi group	3.81976	34.6	-	JYNQ01	2	3411	3335	2/26/15	4/10/17	Contig	DOE Joint Genome Institute	SAMN03351825	GCA_000934685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/685/GCA_000934685.1_ASM93468v1	-	Hel_I _90
Pusillimonas sp. T2	1548123	PRJNA388232	388232	Proteobacteria	Betaproteobacteria	3.3154	56.2	-	NIQA01	54	3127	3033	7/28/17	8/1/17	Scaffold	Nanjing Agriculture University	SAMN07172007	GCA_002236805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/236/805/GCA_002236805.1_ASM223680v1	-	T2
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.72432	55.6	chromosome:NZ_CP017180.1/CP017180.1	-	1	4634	4390	9/16/16	3/28/17	Complete Genome	JCVI	SAMN05581749	GCA_001729705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/705/GCA_001729705.1_ASM172970v1	-	DSM 16687
Megasphaera sp. UPII 199-6	1000568	PRJNA64689	64689	Terrabacteria group	Firmicutes	1.64079	46.4	-	AFIJ01	45	1516	1408	5/23/11	4/17/17	Contig	J. Craig Venter Institute	SAMN00255229	GCA_000214495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/495/GCA_000214495.2_ASM21449v1	-	UPII 199-6
Citromicrobium sp. JLT1363	517722	PRJNA61393	61393	Proteobacteria	Alphaproteobacteria	3.11732	64.9	-	AEUE01	26	3013	2922	1/25/11	4/17/17	Contig	"State Key Laboratory of Marine Environmental Science, Xiamen University"	SAMN02471021	GCA_000186705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/705/GCA_000186705.2_ASM18670v1	21317332	JLT1363
Desulfosporosinus sp. HMP52	1487923	PRJNA244425	244425	Terrabacteria group	Firmicutes	4.74484	41.3	-	JMGA01	84	4446	4207	10/9/14	4/9/17	Contig	Hydrocarbon Metagenomic Project	SAMN02726041	GCA_000765145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/145/GCA_000765145.1_ASM76514v1	-	HMP52
Turicibacter sp. HGF1	910310	PRJNA59523	59523	Terrabacteria group	Firmicutes	2.94747	34.1	-	AEXQ01	142	2781	2693	3/7/11	4/17/17	Contig	J. Craig Venter Institute	SAMN00116780	GCA_000191865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/865/GCA_000191865.2_ASM19186v1	-	HGF1
Methylovorus sp. MM1	1848038	PRJNA320843	320843	Proteobacteria	Betaproteobacteria	2.42488	46.8	-	LXUF01	22	2337	2282	5/20/16	6/20/17	Contig	University of East Anglia	SAMN04958149	GCA_001648895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/895/GCA_001648895.1_ASM164889v1	-	MM1
Methylocystis sp. ATCC 49242	622637	PRJNA52841	52841	Proteobacteria	Alphaproteobacteria	4.72603	62.8	-	AEVM02	6	4588	4307	2/7/11	4/17/17	Scaffold	US DOE Joint Genome Institute (JGI-PGF)	SAMN02256392	GCA_000188155.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/155/GCA_000188155.3_ASM18815v3	21441518	Rockwell
Tepidanaerobacter sp. EBM-49	1918504	PRJNA315143	315143	Terrabacteria group	Firmicutes	2.26155	38.6	-	MPPE01	59	-	-	12/9/16	12/9/16	Contig	UC Berkeley	SAMN06019132	GCA_001896645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/645/GCA_001896645.1_ASM189664v1	-	-
Methanobacterium sp. SMA-27	1495336	PRJNA243944	243944	Euryarchaeota	Methanobacteria	2.49072	32.6	-	JQLY01	1	2545	2415	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02745846	GCA_000744455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/455/GCA_000744455.1_ASM74445v1	-	SMA-27
Candidatus Methanomethylophilus alvus Mx1201	1236689	PRJNA175948	175948	Euryarchaeota	Thermoplasmata	1.6668	55.6	chromosome:NC_020913.1/CP004049.1	-	1	1649	1589	4/9/13	8/18/15	Complete Genome	Université d'Auvergne	SAMN03081445	GCA_000300255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/255/GCA_000300255.2_ASM30025v2	23209209	Mx1201
Rothia sp. HMSC071B01	1715007	PRJNA296134	296134	Terrabacteria group	Actinobacteria	2.42107	59.4	-	LTKR01	45	1905	1810	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04456732	GCA_001808945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/945/GCA_001808945.1_ASM180894v1	-	HMSC071B01
Rhodanobacter sp. OR92	1076524	PRJNA77815	77815	Proteobacteria	Gammaproteobacteria	3.94302	67.7	-	ATYF01	23	3611	3499	7/15/13	4/8/17	Scaffold	JGI	SAMN02441572	GCA_000427545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/545/GCA_000427545.1_ASM42754v1	-	OR92
Thiomonas sp. B1	223789	PRJEB8794	321284	Proteobacteria	Betaproteobacteria	3.87804	63.7	-	CTRI01	23	3702	3541	5/11/16	4/17/17	Scaffold	Genoscope CEA	SAMEA3305040	GCA_900005065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/005/065/GCA_900005065.1_BBA-A_PRJEB8794_v1	-	CB1
Thermogladius calderae 1633	1184251	PRJNA163135	163135	TACK group	Crenarchaeota	1.35632	55.6	chromosome:NC_017954.1/CP003531.1	-	1	1458	1400	5/25/12	8/7/17	Complete Genome	Centre Bioengineering RAS	SAMN02603096	GCA_000264495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/495/GCA_000264495.1_ASM26449v1	"2,284,358,426,801,580"	1633
Aerococcus sp. HMSC10H05	1581084	PRJNA269853	269853	Terrabacteria group	Firmicutes	1.89243	37.1	-	LTZN01	71	1728	1628	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03604111	GCA_001806975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/975/GCA_001806975.1_ASM180697v1	-	HMSC10H05
Ethanoligenens harbinense YUAN-3	663278	PRJNA39729	39729	Terrabacteria group	Firmicutes	3.00858	55.6	chromosome:NC_014828.1/CP002400.1	-	1	2879	2758	12/27/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00008641	GCA_000178115.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/115/GCA_000178115.2_ASM17811v2	-	YUAN-3
Haemophilus sp. HMSC061E01	1715211	PRJNA296340	296340	Proteobacteria	Gammaproteobacteria	1.94891	39.5	-	LTHY01	34	1912	1819	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477561	GCA_001810345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/345/GCA_001810345.1_ASM181034v1	-	HMSC061E01
Enterobacter cloacae	550	PRJNA263343	263343	Proteobacteria	Gammaproteobacteria	4.8521	55.589	chromosome:CP010512.1; plasmid unnamed:CP010513.1	-	2	4657	4082	4/15/16	4/15/16	Complete Genome	Emory University	SAMN03099688	GCA_001620245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/245/GCA_001620245.1_ASM162024v1	-	colR/S
Afipia sp. 1NLS2	666684	PRJNA47055	47055	Proteobacteria	Alphaproteobacteria	3.97176	61.3	-	ADVZ01	10	3865	3743	6/18/10	4/17/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN02441808	GCA_000178995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/995/GCA_000178995.1_ASM17899v1	-	1NLS2
Klebsiella oxytoca	571	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	6.46133	55.5743	chromosome:NZ_CP020358.1/CP020358.1; plasmid unitig_2:NZ_CP020359.1/CP020359.1	-	2	6291	5963	3/27/17	3/30/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014988	GCA_002072655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/655/GCA_002072655.1_ASM207265v1	-	AR_0147
Loktanella sp. 1ANDIMAR09	1700845	PRJNA292480	292480	Proteobacteria	Alphaproteobacteria	3.71927	57.7	-	LIGP01	18	3724	3654	10/23/15	4/11/17	Contig	Univesitat de les Illes Balears (UIB)	SAMN03978777	GCA_001411945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/945/GCA_001411945.1_ASM141194v1	-	1ANDIMAR09
Raoultella ornithinolytica	54291	PRJNA304259	304259	Proteobacteria	Gammaproteobacteria	5.7855	55.535	chromosome:NZ_CP013338.1/CP013338.1; plasmid pKPYL1:NZ_CP013339.1/CP013339.1; plasmid pKPYL2:NZ_CP013340.1/CP013340.1	-	3	5585	5286	12/2/15	4/4/17	Complete Genome	"Beijing Institute of Genomics,Chinese Academy of Sciences"	SAMN04296987	GCA_001455225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/225/GCA_001455225.1_ASM145522v1	-	Yangling I2
Ahrensia sp. R2A130	744979	PRJNA46493	46493	Proteobacteria	Alphaproteobacteria	3.73105	56.9	-	AEEB01	59	3449	3326	8/16/10	4/17/17	Contig	Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN00010388	GCA_000179775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/775/GCA_000179775.1_ASM17977v1	-	R2A130
Phormidium sp. OSCR	1666905	PRJNA283228	283228	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.69486	51.1	-	LJZT01	187	4212	4158	10/14/15	6/23/16	Scaffold	Pacific Northwest National Laboratroy	SAMN03785507	GCA_001314905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/905/GCA_001314905.1_ASM131490v1	26497460	-
Arthrospira sp. TJSD091	1640536	PRJNA280496	280496	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.97883	44.8	-	LAYT01	359	5790	5032	4/20/15	4/18/17	Contig	Tianjin University of Commerce	SAMN03463612	GCA_000974245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/245/GCA_000974245.1_ASM97424v1	-	TJSD091
Subdoligranulum sp. CAG:314	1262970	PRJEB827	206860	Terrabacteria group	Firmicutes	1.50887	48.8	-	CBJL01	24	1383	1341	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138780	GCA_000437915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/915/GCA_000437915.1_MGS314	-	-
Thalassospira sp. HJ	1616823	PRJNA275638	275638	Proteobacteria	Alphaproteobacteria	4.2694	54.9	-	JYII01	22	3935	3838	3/6/15	4/10/17	Contig	Okinawa Institute of Science and Technology	SAMN03351980	GCA_000948415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/415/GCA_000948415.1_ASM94841v1	25977412	HJ
Collinsella sp. MS5	1499681	PRJEB6470	251845	Terrabacteria group	Actinobacteria	1.97017	58	-	CDJG01	12	1751	1661	11/28/14	4/10/17	Contig	URMITE	SAMEA3141918	GCA_000821265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/265/GCA_000821265.1_Collinsella_massilioamazoniensis_MS5	-	MS5
Klebsiella michiganensis E718	1191061	PRJNA167370	167370	Proteobacteria	Gammaproteobacteria	6.56168	55.5213	chromosome:NC_018106.1/CP003683.1; plasmid pKOX_NDM1:NC_021501.1/JQ314407.1; plasmid pKOX_R1:NC_018107.1/CP003684.1	-	3	6475	6020	7/9/12	2/21/17	Complete Genome	National Chung Hsing University	SAMN02603642	GCA_000276705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/705/GCA_000276705.2_ASM27670v2	22965083	E718
Coprococcus sp. HPP0048	1078091	PRJNA72501	72501	Terrabacteria group	Firmicutes	2.79234	41.9	-	AGEW01	5	2662	2531	6/13/13	4/8/17	Scaffold	Broad Institute	SAMN02596737	GCA_000411355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/355/GCA_000411355.1_Copr_sp_HPP0048_V1	-	HPP0048
Corynebacterium ammoniagenes	1697	PRJNA371386	371386	Terrabacteria group	Actinobacteria	2.80827	55.5	chromosome:NZ_CP019705.1/CP019705.1	-	1	2564	2451	2/21/17	2/23/17	Complete Genome	Kyungpook National University	SAMN06298555	GCA_002005245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/245/GCA_002005245.1_ASM200524v1	-	KCCM 40472
Veillonella sp. 6_1_27	450749	PRJNA41977	41977	Terrabacteria group	Firmicutes	2.17442	38.7	-	ADCW01	10	1973	1896	3/30/10	4/17/17	Scaffold	Broad Institute	SAMN02463831	GCA_000163735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/735/GCA_000163735.1_ASM16373v1	-	6_1_27
Peptoniphilus sp. oral taxon 386 str. F0131	575609	PRJNA41969	41969	Terrabacteria group	Firmicutes	1.56939	31.1	-	ADCS01	11	1529	1413	2/26/10	4/17/17	Scaffold	Broad Institute	SAMN02463827	GCA_000090945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/090/945/GCA_000090945.1_ASM9094v1	-	F0131
Corynebacterium ammoniagenes DSM 20306	649754	PRJNA242361	242361	Terrabacteria group	Actinobacteria	2.79019	55.5	chromosome:NZ_CP009244.1/CP009244.1	-	1	2548	2447	1/10/17	4/16/17	Complete Genome	Bielefeld University	SAMN02996495	GCA_001941425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/425/GCA_001941425.1_ASM194142v1	-	DSM 20306 = 9.6
Synechococcus elongatus PCC 6301	269084	PRJNA13282	13282	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.69625	55.5	chromosome:NC_006576.1/AP008231.1	-	1	2699	2602	12/14/04	4/6/17	Complete Genome	"Nagoya University, Japan"	SAMD00061073	GCA_000010065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/065/GCA_000010065.1_ASM1006v1	"164,072,321,688,272,000,000,000"	PCC 6301
Tannerella sp. 6_1_58FAA_CT1	665949	PRJNA40043	40043	FCB group	Bacteroidetes/Chlorobi group	3.86797	39.7	-	ACWX01	32	3233	3038	12/16/11	6/12/17	Scaffold	Broad Institute	SAMN02463805	GCA_000238695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/695/GCA_000238695.1_Tannerella_sp_6_1_58FAA_CT1_V1	-	6_1_58FAA_CT1
Eggerthella sp. 1_3_56FAA	665943	PRJNA40023	40023	Terrabacteria group	Actinobacteria	3.45327	63.6	-	ACWN01	28	3011	2812	1/4/11	4/17/17	Scaffold	Broad Institute	SAMN02463797	GCA_000185625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/625/GCA_000185625.1_ASM18562v1	-	1_3_56FAA
Anaerostipes sp. 992a	1261637	PRJNA341691	341691	Terrabacteria group	Firmicutes	2.79817	40.1	-	MJIG01	14	2718	2566	1/9/17	4/16/17	Contig	USDA-ARS	SAMN05726911	GCA_001940245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/245/GCA_001940245.1_ASM194024v1	27613689	992a
Synergistes sp. Zagget9	1930003	PRJNA357304	357304	Synergistetes	Synergistia	2.75173	51.2	-	MSHK01	46	-	-	1/10/17	1/10/17	Scaffold	University of Queensland	SAMN06140838	GCA_001941205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/205/GCA_001941205.1_ASM194120v1	-	-
Phascolarctobacterium sp. CAG:207	1262914	PRJEB757	206604	Terrabacteria group	Firmicutes	2.37128	43.5	-	CBDS01	62	2277	2229	5/31/13	1/30/15	Scaffold	DTU	SAMEA2272658	GCA_000436295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/295/GCA_000436295.1_MGS207	-	-
Porphyromonas sp. KLE 1280	997829	PRJNA64723	64723	FCB group	Bacteroidetes/Chlorobi group	2.2042	55.7	-	JNOS01	7	1716	1630	6/10/14	4/17/17	Scaffold	Washington University Genome Center	SAMN02849569	GCA_000700805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/805/GCA_000700805.1_ASM70080v1	-	KLE 1280
Haematospirillum jordaniae	1549855	PRJNA310863	310863	Proteobacteria	Alphaproteobacteria	2.46762	55.474	chromosome:NZ_CP014525.1/CP014525.1; plasmid unnamed 1:NZ_CP014526.1/CP014526.1; plasmid unnamed 2:NZ_CP014527.1/CP014527.1	-	3	2309	2205	4/6/16	4/12/17	Complete Genome	CDC	SAMN04456661	GCA_001611975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/975/GCA_001611975.1_ASM161197v1	-	H5569
Enterobacter asburiae	61645	PRJNA246471	246471	Proteobacteria	Gammaproteobacteria	5.03145	55.4677	chromosome:NZ_CP011591.1/CP011591.1; plasmid pCAV1043-10:NZ_CP011586.1/CP011586.1; plasmid pCAV1043-1919:NZ_CP011585.1/CP011585.1; plasmid pCAV1043-51:NZ_CP011587.1/CP011587.1; plasmid pCAV1043-58:NZ_CP011588.1/CP011588.1; plasmid pCAV1043-97:NZ_CP011590.1/CP011590.1; plasmid pKPC_CAV1043:NZ_CP011589.1/CP011589.1	-	7	5027	4689	6/9/15	4/3/17	Complete Genome	University of Oxford	SAMN03733641	GCA_001022095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/095/GCA_001022095.1_ASM102209v1	-	CAV1043
Alistipes sp. AL-1	1499682	PRJEB6472	251842	FCB group	Bacteroidetes/Chlorobi group	3.61362	58.3	-	CCXE01	7	2967	2835	9/18/14	4/10/17	Scaffold	URMITE	SAMEA2697687	GCA_000821285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/285/GCA_000821285.2_Alistipes_jeddahmassiliense_str._AL-1	-	-
Synechococcus sp. UTEX 2973	1350461	PRJNA209528	209528	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.74463	55.4675	chromosome:NZ_CP006471.1/CP006471.1; plasmid unnamed:NZ_CP006473.1/CP006473.1; plasmid unnamed:NZ_CP006472.1/CP006472.1	-	3	2745	2678	1/9/15	4/10/17	Complete Genome	Washington University in St Louis	SAMN03278348	GCA_000817325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/325/GCA_000817325.1_ASM81732v1	-	UTEX 2973
Propionibacterium sp. 5_U_42AFAA	450748	PRJNA39413	39413	Terrabacteria group	Actinobacteria	2.53281	60.1	-	ACUE01	9	2559	2399	10/21/11	4/17/17	Scaffold	Broad Institute	SAMN02463781	GCA_000233555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/555/GCA_000233555.1_Propionibact_sp_5_U_42AFAA_V1	-	5_U_42AFAA
Ralstonia sp. 5_2_56FAA	658080	PRJNA39391	39391	Proteobacteria	Betaproteobacteria	5.25477	63.6	-	ACTT02	17	4988	4805	10/3/11	5/19/17	Scaffold	Broad Institute	SAMN02463777	GCA_000227255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/255/GCA_000227255.2_Ralstonia_sp_5_2_56FAA_V2	-	5_2_56FAA
Dorea sp. D27	658665	PRJNA39367	39367	Terrabacteria group	Firmicutes	3.90422	48.6	-	ACTH01	21	3704	3530	7/22/15	4/17/17	Scaffold	Broad Institute	SAMN00103276	GCA_001185345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/345/GCA_001185345.2_ASM118534v2	-	D27
Acidaminococcus sp. D21	563191	PRJNA34117	34117	Terrabacteria group	Firmicutes	2.23897	50.2	-	ACGB01	79	2157	2047	3/10/09	4/17/17	Contig	Broad Institute	SAMN02595304	GCA_000174215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/215/GCA_000174215.1_ASM17421v1	-	D21
Dermacoccus sp. CCH2-D9	1768779	PRJNA299404	299404	Terrabacteria group	Actinobacteria	2.78701	69.2	-	LSJT01	149	2553	2377	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299470	GCA_001556795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/795/GCA_001556795.1_ASM155679v1	-	CCH2-D9
Klebsiella oxytoca	571	PRJDB4173	293527	Proteobacteria	Gammaproteobacteria	6.34338	55.4593	chromosome Unknown:NZ_AP014951.1/AP014951.1; plasmid pKO_JKo3_1:NZ_AP014952.1/AP014952.1; plasmid pKO_JKo3_2:NZ_AP014953.1/AP014953.1; plasmid pKO_JKo3_3:NZ_AP014954.1/AP014954.1; plasmid pKO_JKo3_4:NZ_AP014955.1/AP014955.1	-	5	6316	5968	9/15/15	2/21/17	Complete Genome	The Jikei University School of Medicine	SAMD00039250	GCA_001548355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/355/GCA_001548355.1_ASM154835v1	-	JKo3
Synechococcus elongatus PCC 7942	1140	PRJNA10645	10645	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.74227	55.456	chromosome:NC_007604.1/CP000100.1; plasmid 1:NC_007595.1/CP000101.1	-	2	2750	2685	11/8/05	4/6/17	Complete Genome	DOE Joint Genome Institute	SAMN02598254	GCA_000012525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/525/GCA_000012525.1_ASM1252v1	-	PCC 7942
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.30352	55.4399	chromosome:NZ_CP012167.1/CP012167.1; plasmid p34998-106.409kb:NZ_CP010383.2/CP010383.2; plasmid p34998-210.894kb:NZ_CP012169.1/CP012169.1; plasmid p34998-239.973kb:NZ_CP012168.1/CP012168.1; plasmid p34998-4.921kb:NZ_CP010381.1/CP010381.1; plasmid p34998-53.129kb:NZ_CP010382.1/CP010382.1	-	6	5291	5016	8/3/15	3/26/17	Complete Genome	JCVI	SAMN03067417	GCA_000807425.4	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/425/GCA_000807425.4_ASM80742v4	-	34998
Micromonospora sp. ATCC 39149	219305	PRJNA33595	33595	Terrabacteria group	Actinobacteria	6.8199	71.2	-	ACES01	4	6013	5153	2/26/09	5/19/17	Scaffold	Broad Institute	SAMN02595295	GCA_000158815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/815/GCA_000158815.1_ASM15881v1	-	ATCC 39149
Enterobacter asburiae	61645	PRJNA285282	285282	Proteobacteria	Gammaproteobacteria	4.80622	55.4279	chromosome:NZ_CP011863.1/CP011863.1; plasmid unnamed 1:NZ_CP011864.1/CP011864.1; plasmid unnamed 2:NZ_CP011865.1/CP011865.1; plasmid unnamed 3:NZ_CP011866.1/CP011866.1; plasmid unnamed 4:NZ_CP011867.1/CP011867.1	-	5	4879	4436	1/21/16	4/4/17	Complete Genome	Chengdu Military General Hospital	SAMN03742638	GCA_001521715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/715/GCA_001521715.1_ASM152171v1	-	ATCC 35953
Desulfovibrio sp. FW1012B	644968	PRJNA38043	38043	Proteobacteria	delta/epsilon subdivisions	4.22167	66.4619	chromosome:NZ_CM001368.1/CM001368.1; plasmid pFW10101:NZ_CM001369.1/CM001369.1; plasmid pFW10102:NZ_CM001370.1/CM001370.1	ADFE02	3	3773	3682	1/11/10	5/18/17	Chromosome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02256536	GCA_000177215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/215/GCA_000177215.2_ASM17721v2	25767232	FW1012B
Azospirillum sp. RU37A	1907312	PRJEB21411	391657	Proteobacteria	Alphaproteobacteria	6.13041	63.6	-	FZOP01	71	5115	4981	7/13/17	7/21/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05880591	GCA_900188305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/305/GCA_900188305.1_IMG-taxon_2708742415_annotated_assembly	-	RU37A
Fusobacterium sp. oral taxon 370 str. F0437	861452	PRJNA50399	50399	Fusobacteria	Fusobacteriia	2.0933	27.6	-	AGAD01	133	2059	1658	11/15/11	4/17/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN02299438	GCA_000235465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/465/GCA_000235465.1_ASM23546v1	-	F0437
Microbulbifer agarilyticus	260552	PRJNA371746	371746	Proteobacteria	Gammaproteobacteria	4.25563	55.4	chromosome:NZ_CP019650.1/CP019650.1	-	1	3541	3447	2/15/17	4/17/17	Complete Genome	National Marine Biodiversity Institute of Korea	SAMN06311449	GCA_001999945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/945/GCA_001999945.1_ASM199994v1	-	GP101
Shigella sp. FC130	1892896	PRJNA339977	339977	Proteobacteria	Gammaproteobacteria	4.19709	38.4	-	MECU01	90	3960	3743	9/8/16	2/25/17	Scaffold	Christian Medical College	SAMN05616411	GCA_001722135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/135/GCA_001722135.1_ASM172213v1	-	FC130
Coprobacillus sp. 29_1	469596	PRJNA46361	46361	Terrabacteria group	Firmicutes	3.85736	31.3	-	ADKX01	38	3962	3739	1/21/11	4/17/17	Scaffold	Broad Institute	SAMN02463848	GCA_000186525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/525/GCA_000186525.1_Coprobacillus_sp_29_1_V1	-	29_1
Tolypothrix sp. NIES-4075	2005459	PRJDB5665	381306	Terrabacteria group	Cyanobacteria/Melainabacteria group	8.25444	41.8	-	BDUC01	66	7381	6758	6/24/17	7/15/17	Scaffold	Toyohashi University of Technology	SAMD00081171	GCA_002218085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/085/GCA_002218085.1_ASM221808v1	-	NIES-4075
Chloroflexus sp. Y-396-1	867845	PRJNA50741	50741	Terrabacteria group	Chloroflexi	4.89099	53.9	-	AZXV01	1	3800	3646	1/3/14	4/17/17	Scaffold	JGI	SAMN02597278	GCA_000516515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/515/GCA_000516515.1_ASM51651v1	-	Y-396-1
Glaciecola sp. HTCC2999	455436	PRJNA20121	20121	Proteobacteria	Gammaproteobacteria	2.56088	40.8	-	ABST01	11	2264	2153	7/18/08	4/17/17	Scaffold	J. Craig Venter Institute	SAMN02436144	GCA_000155775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/775/GCA_000155775.1_ASM15577v1	-	HTCC2999
Cyanobium sp. PCC 7001	180281	PRJNA19301	19301	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.83425	68.7	-	ABSE01	2	2808	2706	7/15/08	4/17/17	Scaffold	Gordon and Betty Moore Foundation Microbial Genome Sequencing Project	SAMN02436316	GCA_000155635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/635/GCA_000155635.1_ASM15563v1	-	PCC 7001
Actinobacteria bacterium IMCC26256	1650658	PRJNA282858	282858	Terrabacteria group	Actinobacteria	2.46186	55.4	chromosome:NZ_CP011489.1/CP011489.1	-	1	2336	2275	6/10/15	4/10/17	Complete Genome	Inha University	SAMN03481557	GCA_001023575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/575/GCA_001023575.1_ASM102357v1	-	IMCC26256
Methylovorus sp. MP688	887061	PRJNA52541	52541	Proteobacteria	Betaproteobacteria	2.86239	55.4	chromosome:NC_014733.1/CP002252.1	-	1	2730	2653	11/23/10	4/17/17	Complete Genome	Beijing Institute of Biotechnology	SAMN02603013	GCA_000183115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/115/GCA_000183115.1_ASM18311v1	21148725	MP688
Mobiluncus curtisii ATCC 43063	548479	PRJNA31519	31519	Terrabacteria group	Actinobacteria	2.14648	55.4	chromosome:NC_014246.1/CP001992.1	-	1	1906	1832	6/14/10	4/7/17	Complete Genome	Baylor College of Medicine	SAMN00001505	GCA_000196535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/535/GCA_000196535.1_ASM19653v1	-	ATCC 43063
Bacteroides sp. 9_1_42FAA	457395	PRJNA32445	32445	FCB group	Bacteroidetes/Chlorobi group	5.61857	42.3	-	ACAA02	17	4830	4545	1/30/09	4/17/17	Scaffold	Broad Institute	SAMN02463695	GCA_000157075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/075/GCA_000157075.2_Bact_sp_9_1_42FAA_V2	-	9_1_42FAA
Thioalkalivibrio sp. HL-Eb18	1266913	PRJNA183047	183047	Proteobacteria	Gammaproteobacteria	2.76186	65.8	-	AQOW01	35	2735	2565	4/12/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441072	GCA_000364985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/985/GCA_000364985.1_ASM36498v1	-	HL-Eb18
Ruminococcus sp. FC2018	1410617	PRJNA223448	223448	Terrabacteria group	Firmicutes	2.40445	45.9	-	JHXH01	32	2245	2141	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02744013	GCA_000621805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/805/GCA_000621805.1_ASM62180v1	-	FC2018
Methanosphaerula palustris E1-9c	521011	PRJNA29381	29381	Euryarchaeota	Methanomicrobia	2.92292	55.4	chromosome:NC_011832.1/CP001338.1	-	1	2838	2696	1/5/09	8/28/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00001866	GCA_000021965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/965/GCA_000021965.1_ASM2196v1	26543115	E1-9c
Rhodopirellula baltica SH 1	243090	PRJNA413	413	PVC group	Planctomycetes	7.14558	55.4	chromosome:NC_005027.1/BX119912.1	-	1	7405	7325	7/2/03	8/28/16	Complete Genome	Max-Plank-Institute	SAMEA3138332	GCA_000196115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/115/GCA_000196115.1_ASM19611v1	"1,283,541,619,725,960"	1
Rhodoferax sp. TH121	2022803	PRJNA395961	395961	Proteobacteria	Betaproteobacteria	3.98906	61.4	-	NOXW01	22	3781	3709	8/14/17	8/16/17	Contig	Nanjing Institute of Geography and Limnology	SAMN07418559	GCA_002251855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/855/GCA_002251855.1_ASM225185v1	-	TH121
Candidatus Pelagibacter sp. RS40	1977865	PRJNA378857	378857	Proteobacteria	Alphaproteobacteria	1.37891	29.4	chromosome:NZ_CP020778.1/CP020778.1	-	1	1429	1384	4/20/17	4/22/17	Chromosome	King Abdullah University of Science and Technology (KAUST)	SAMN06562975	GCA_002101295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/295/GCA_002101295.1_ASM210129v1	-	RS40
Serratia liquefaciens ATCC 27592	1346614	PRJNA208332	208332	Proteobacteria	Gammaproteobacteria	5.28272	55.3766	chromosome:NC_021741.1/CP006252.1; plasmid unnamed:NC_021742.1/CP006253.1	-	2	5006	4811	7/11/13	4/8/17	Complete Genome	University of Florida	SAMN02604177	GCA_000422085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/085/GCA_000422085.1_ASM42208v1	23950115	ATCC 27592
Pseudovibrio sp. JE062	439495	PRJNA19345	19345	Proteobacteria	Alphaproteobacteria	5.72652	52.5	-	ABXL01	19	5189	4995	9/30/08	5/19/17	Scaffold	Moore Foundation	SAMN02436269	GCA_000156235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/235/GCA_000156235.1_ASM15623v1	-	JE062
Pedobacter sp. Leaf176	1736286	PRJNA297956	297956	FCB group	Bacteroidetes/Chlorobi group	4.75372	38.4	-	LMPD01	9	4169	4072	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151666	GCA_001424305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/305/GCA_001424305.1_Leaf176	-	Leaf176
Limnobacter sp. CACIAM 66H1	1813033	PRJNA314682	314682	Proteobacteria	Betaproteobacteria	3.21751	52.5	-	LUJK01	108	3114	2920	3/29/16	3/29/16	Scaffold	Universidade Federal do Para	SAMN04546251	GCA_001601825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/825/GCA_001601825.1_ASM160182v1	-	-
Algoriphagus sp. A40	1945863	PRJNA369723	369723	FCB group	Bacteroidetes/Chlorobi group	5.20128	44.1	-	MUNY01	94	4514	4416	2/16/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN06293008	GCA_002002735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/735/GCA_002002735.1_ASM200273v1	-	A40
Enterobacter cloacae	550	PRJNA246471	246471	Proteobacteria	Gammaproteobacteria	5.00473	55.3562	chromosome:NZ_CP011584.1/CP011584.1; plasmid pCAV1668-85:NZ_CP011583.1/CP011583.1; plasmid pKPC_CAV1668:NZ_CP011582.1/CP011582.1	-	3	4907	4645	6/9/15	3/26/17	Complete Genome	University of Oxford	SAMN03733827	GCA_001022055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/055/GCA_001022055.1_ASM102205v1	-	CAV1668
Enterobacter cloacae	550	PRJNA246471	246471	Proteobacteria	Gammaproteobacteria	5.00699	55.355	chromosome:NZ_CP011572.1/CP011572.1; plasmid pCAV1311-3223:NZ_CP011569.1/CP011569.1; plasmid pCAV1311-34:NZ_CP011570.1/CP011570.1; plasmid pKPC_CAV1311:NZ_CP011571.1/CP011571.1	-	4	4906	4636	6/9/15	3/26/17	Complete Genome	University of Oxford	SAMN03733748	GCA_001022015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/015/GCA_001022015.1_ASM102201v1	-	CAV1311
Enterobacter cloacae	550	PRJNA246471	246471	Proteobacteria	Gammaproteobacteria	5.00507	55.3544	chromosome:NZ_CP011581.1/CP011581.1; plasmid pCAV1411-34:NZ_CP011579.1/CP011579.1; plasmid pKPC_CAV1411:NZ_CP011580.1/CP011580.1	-	3	4906	4641	6/9/15	3/26/17	Complete Genome	University of Oxford	SAMN03733769	GCA_001022075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/075/GCA_001022075.1_ASM102207v1	-	CAV1411
Enterobacter cloacae	550	PRJNA246471	246471	Proteobacteria	Gammaproteobacteria	4.97353	55.3541	chromosome:NZ_CP011650.1/CP011650.1; plasmid pCAV1669-34:NZ_CP011648.1/CP011648.1; plasmid pKPC_CAV1669:NZ_CP011649.1/CP011649.1	-	3	4875	4611	6/9/15	3/26/17	Complete Genome	University of Oxford	SAMN03733830	GCA_001022255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/255/GCA_001022255.1_ASM102225v1	-	CAV1669
Beggiatoa sp. PS	422289	PRJNA18683	18683	Proteobacteria	Gammaproteobacteria	7.63154	38.2	-	ABBZ01	6769	6676	6644	7/17/07	1/8/14	Contig	Center for Genomic Sciences	SAMN02470514	GCA_000170715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/715/GCA_000170715.1_ASM17071v1	-	-
Alcanivorax sp. N3-7A	2014542	PRJNA391035	391035	Proteobacteria	Gammaproteobacteria	4.74818	63.0094	chromosome:NZ_CP022307.1/CP022307.1; plasmid unnamed1:NZ_CP022308.1/CP022308.1; plasmid unnamed2:NZ_CP022309.1/CP022309.1	-	3	4383	4151	7/10/17	7/12/17	Chromosome	Memorial University of Newfoundland	SAMN07256653	GCA_002216105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/105/GCA_002216105.1_ASM221610v1	-	N3-7A
Eubacterium sp. 14-2	1235790	PRJNA175980	175980	Terrabacteria group	Firmicutes	3.99687	45.1	-	ASSS01	4	3854	3635	5/31/13	4/8/17	Scaffold	Broad Institute	SAMN01730989	GCA_000403845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/845/GCA_000403845.2_Euba_bact_14-2_V1	-	14-2
Enterobacter cloacae	550	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	4.89483	55.353	chromosome:NZ_CP020053.1/CP020053.1; plasmid unitig_1:NZ_CP020054.1/CP020054.1	-	2	4800	4561	3/21/17	3/23/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014906	GCA_002055735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/735/GCA_002055735.1_ASM205573v1	-	AR_0065
Brevibacillus sp. CF112	1144311	PRJNA83045	83045	Terrabacteria group	Firmicutes	5.27182	53.9	-	AKKB01	172	5161	4959	7/27/12	5/18/17	Contig	Oak Ridge National Lab	SAMN00839619	GCA_000282015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/015/GCA_000282015.1_Brevibacillus.strCF112_v1.0	23045501	CF112
Enterobacter cloacae complex sp. ECNIH7	1915310	PRJNA279659	279659	Proteobacteria	Gammaproteobacteria	5.38883	55.3472	chromosome:NZ_CP017990.1/CP017990.1; plasmid pENT-1ac:NZ_CP017991.1/CP017991.1; plasmid pENT-2c5:NZ_CP017992.1/CP017992.1; plasmid pKPC-98f:NZ_CP017993.1/CP017993.1	-	4	5409	5139	6/26/17	7/14/17	Complete Genome	NHGRI	SAMN03455979	GCA_002208095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/095/GCA_002208095.1_ASM220809v1	-	ECNIH7
Enterobacter cloacae complex 'Hoffmann cluster III'	1812934	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.67857	55.3072	chromosome:NZ_CP017186.1/CP017186.1; plasmid pDSMZ14563:NZ_CP017187.1/CP017187.1	-	2	4534	4307	9/16/16	4/5/17	Complete Genome	JCVI	SAMN05581748	GCA_001729745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/745/GCA_001729745.1_ASM172974v1	-	DSM 14563
Caulobacter sp. URHA0033	1298862	PRJNA190819	190819	Proteobacteria	Alphaproteobacteria	5.64222	68.6	-	AUEO01	56	5089	4935	7/10/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441184	GCA_000426025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/025/GCA_000426025.1_ASM42602v1	-	URHA0033
Dehalococcoides sp. JdFR-57	1935050	PRJNA269163	269163	Terrabacteria group	Chloroflexi	0.776292	57.6	-	MTNS01	207	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226374	GCA_002010445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/445/GCA_002010445.1_ASM201044v1	28350381	-
Psychromonas sp. SP041	1365007	PRJEB4247	217874	Proteobacteria	Gammaproteobacteria	3.93207	36.7	-	CBRF01	461	3354	3202	9/1/13	4/9/17	Contig	University of Tromso	SAMEA2272264	GCA_000470315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/315/GCA_000470315.1_PSYCHROMONAS1	-	SP041
Klebsiella sp. LTGPAF-6F	1905288	PRJNA344738	344738	Proteobacteria	Gammaproteobacteria	6.7904	55.3044	chromosome:NZ_CP017450.1/CP017450.1; plasmid unnamed1:NZ_CP017451.1/CP017451.1; plasmid unnamed2:NZ_CP017452.1/CP017452.1	-	3	6689	6246	10/6/16	2/21/17	Complete Genome	Northwest A&F University	SAMN05832682	GCA_001753185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/185/GCA_001753185.1_ASM175318v1	-	LTGPAF-6F
Enterobacter cloacae	550	PRJNA387717	387717	Proteobacteria	Gammaproteobacteria	5.09013	55.3	chromosome:NZ_CP021851.1/CP021851.1	-	1	4990	4716	6/16/17	6/21/17	Complete Genome	Beijing Institute of Microbiology and Epidemiology	SAMN07162522	GCA_002197345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/345/GCA_002197345.1_ASM219734v1	-	A1137
Enterobacter xiangfangensis	1296536	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.66185	55.3	chromosome:NZ_CP017183.1/CP017183.1	-	1	4533	4306	9/16/16	4/5/17	Complete Genome	JCVI	SAMN05581746	GCA_001729785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/785/GCA_001729785.1_ASM172978v1	-	LMG27195
Roseobacter sp. GAI101	391589	PRJNA30723	30723	Proteobacteria	Alphaproteobacteria	4.52795	58.7	-	ABXS01	9	4251	4080	10/1/08	5/19/17	Scaffold	Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436271	GCA_000156335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/335/GCA_000156335.1_ASM15633v1	-	GAI101
Marinomonas sp. MED121	314277	PRJNA13587	13587	Proteobacteria	Gammaproteobacteria	5.15323	40.9	-	AANE01	13	4714	4553	1/30/06	5/19/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436165	GCA_000153025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/025/GCA_000153025.1_ASM15302v1	-	MED121
Roseovarius sp. TM1035	391613	PRJNA19363	19363	Proteobacteria	Alphaproteobacteria	4.20981	61	-	ABCL01	15	4031	3931	6/19/07	5/19/17	Contig	Moore Foundation	SAMN02436094	GCA_000170775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/775/GCA_000170775.1_ASM17077v1	-	TM1035
Photobacterium sp. JCM 19050	1460644	PRJDB1622	243818	Proteobacteria	Gammaproteobacteria	5.44326	50.1	-	BAXG01	116	5284	3625	10/1/15	4/11/17	Contig	"Microbe Division/JCM, RIKEN BioResource Center"	SAMD00000381	GCA_001310455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/455/GCA_001310455.1_ASM131045v1	-	JCM 19050
Janibacter sp. Soil728	1736393	PRJNA298127	298127	Terrabacteria group	Actinobacteria	3.63784	69.9	-	LMRZ01	10	3481	3382	11/2/15	4/11/17	Contig	ETH Zurich	SAMN04155658	GCA_001428305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/305/GCA_001428305.1_Soil728	26633631	Soil728
Nitrobacter sp. 62-13	1895797	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	3.5404	62.1	-	MKRN01	215	3351	3023	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660504	GCA_001896955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/955/GCA_001896955.1_ASM189695v1	-	-
Moritella sp. JT01	756698	PRJNA291594	291594	Proteobacteria	Gammaproteobacteria	4.83642	40	-	LOCN01	42	4392	4193	2/25/16	4/16/17	Scaffold	Universidade do Vale do Itajai (UNIVALI)	SAMN03946173	GCA_001574435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/435/GCA_001574435.1_MoritellaJT01	-	JT01
Serratia liquefaciens	614	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.2846	55.3	chromosome:NZ_CP014017.1/CP014017.1	-	1	5015	4726	2/11/16	4/11/17	Complete Genome	US Food and Drug Administration 	SAMN03996271	GCA_001559135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/135/GCA_001559135.1_ASM155913v1	-	FDAARGOS_125
Robiginitalea biformata HTCC2501	313596	PRJNA13461	13461	FCB group	Bacteroidetes/Chlorobi group	3.53038	55.3	chromosome:NC_013222.1/CP001712.1	-	1	3141	3076	9/11/09	4/17/17	Complete Genome	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02603916	GCA_000024125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/125/GCA_000024125.1_ASM2412v1	19767438	HTCC2501
Corynebacterium deserti GIMN1.010	931089	PRJNA222609	222609	Terrabacteria group	Actinobacteria	3.03389	55.2745	chromosome:NZ_CP009220.1/CP009220.1; plasmid pCdes1:NZ_CP009221.1/CP009221.1; plasmid pCdes2:NZ_CP009222.1/CP009222.1	-	3	2816	2616	9/2/15	4/11/17	Complete Genome	Bielefeld University	SAMN02950576	GCA_001277995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/995/GCA_001277995.1_ASM127799v1	-	GIMN1.010
Jannaschia sp. EhC01	1849359	PRJNA321723	321723	Proteobacteria	Alphaproteobacteria	4.57999	62.7	-	LXYJ01	96	4529	4382	5/24/16	4/12/17	Scaffold	University of Alberta	SAMN04957307	GCA_001650845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/845/GCA_001650845.1_ASM165084v1	-	EhC01
Chelativorans sp. J32	935840	PRJNA202357	202357	Proteobacteria	Alphaproteobacteria	4.70034	61.2	-	JAEQ01	46	4547	4372	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02584951	GCA_000518985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/985/GCA_000518985.1_ASM51898v1	-	J32
Agrobacterium genomosp. 1 str. S56	1183429	PRJEB12181	379249	Proteobacteria	Alphaproteobacteria	5.97907	58.4	-	FBWB01	6	5693	5414	3/16/17	4/3/17	Scaffold	Genoscope CEA	SAMEA3722805	GCA_900014385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/385/GCA_900014385.1_AHY_PRJEB12181_v1	-	S56
Agrobacterium genomosp. 7 str. RV3	1183426	PRJEB12192	379238	Proteobacteria	Alphaproteobacteria	5.28396	59.7	-	FBWD01	3	5062	4818	3/16/17	4/3/17	Scaffold	Genoscope CEA	SAMEA3722815	GCA_900013505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/505/GCA_900013505.1_AHY_PRJEB12192_v1	-	RV3
Sulfitobacter sp. EE-36	52598	PRJNA13501	13501	Proteobacteria	Alphaproteobacteria	3.5485	60.3	-	AALV01	5	3446	3337	12/22/05	4/17/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436163	GCA_000152605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/605/GCA_000152605.1_ASM15260v1	-	EE-36
Erythrobacter sp. NAP1	237727	PRJNA13512	13512	Proteobacteria	Alphaproteobacteria	3.26617	61	-	AAMW01	2	3159	3096	1/24/06	4/17/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436135	GCA_000152865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/865/GCA_000152865.1_ASM15286v1	21952547	NAP1
Epulopiscium sp. SCG-B10WGA-EpuloA2	1712379	PRJNA294498	294498	Terrabacteria group	Firmicutes	0.688492	31.3	-	LJHF01	172	613	488	2/2/17	2/2/17	Contig	King Abdullah University of Science and Technology (KAUST)	SAMN04038461	GCA_001983465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/465/GCA_001983465.1_ASM198346v1	-	-
Paraburkholderia mimosarum STM 3621	1038870	PRJNA163557	163557	Proteobacteria	Betaproteobacteria	8.64028	63.9	-	AXAO01	268	7942	7265	9/30/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440788	GCA_000472845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/845/GCA_000472845.1_ASM47284v1	-	STM 3621
Agrobacterium fabrum str. J-07	1183433	PRJEB12194	379240	Proteobacteria	Alphaproteobacteria	5.63654	59.1	-	FBWI01	4	5472	5238	3/16/17	4/3/17	Scaffold	Genoscope CEA	SAMEA3722817	GCA_900013525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/525/GCA_900013525.1_AHY_PRJEB12194_v1	-	J-07
Citreicella sp. 357	766499	PRJNA49053	49053	Proteobacteria	Alphaproteobacteria	4.59861	64.2	-	AJKJ01	180	4448	4145	4/17/12	5/18/17	Contig	Microbiologia. Universitat de les Illes Balears (UIB).	SAMN02471399	GCA_000259095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/095/GCA_000259095.1_ASM25909v1	22965089	357
Methyloversatilis sp. 12-65-5	1970398	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	1.82933	65.1	-	NCCD01	801	2252	1919	8/16/17	8/16/17	Scaffold	None	SAMN06622407	GCA_002279505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/505/GCA_002279505.1_ASM227950v1	-	-
Nocardioides sp. CF8	110319	PRJNA60007	60007	Terrabacteria group	Actinobacteria	4.21925	69.9499	chromosome:NZ_CM001852.1/CM001852.1	ASEP01	1	8068	7798	5/7/13	4/17/17	Chromosome	Oregon State University	SAMN02470782	GCA_000389985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/985/GCA_000389985.1_1.0	23833136	CF8
Paracoccus sp. J39	935848	PRJNA202362	202362	Proteobacteria	Alphaproteobacteria	4.42837	68.1	-	JAEN01	49	4291	4131	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02584956	GCA_000518925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/925/GCA_000518925.1_ASM51892v1	-	J39
Erwinia gerundensis	1619313	PRJEB11465	308682	Proteobacteria	Gammaproteobacteria	4.48126	55.2684	chromosome 1:NZ_LN907827.1/LN907827.1; plasmid pEM01:NZ_LN907828.1/LN907828.1; plasmid pEM02:NZ_LN907829.1/LN907829.1	-	3	4158	3983	1/7/16	4/11/17	Complete Genome	JLU	SAMEA3650399	GCA_001517405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/405/GCA_001517405.1_EM595	-	-
Amycolatopsis sp. H5	1905142	PRJNA393243	393243	Terrabacteria group	Actinobacteria	10.67	70.8	-	NMUL01	163	9933	9448	7/27/17	8/1/17	Contig	University of Tuebingen	SAMN07326324	GCA_002234595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/234/595/GCA_002234595.1_ASM223459v1	-	H5
Herbaspirillum sp. WT00C	1892903	PRJNA340064	340064	Proteobacteria	Betaproteobacteria	6.07982	62.4	-	MIJG01	4	5410	5233	1/3/17	4/16/17	Scaffold	Hubei university	SAMN05631086	GCA_001929405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/405/GCA_001929405.1_ASM192940v1	-	WT00C
Raoultella ornithinolytica	54291	PRJNA385928	385928	Proteobacteria	Gammaproteobacteria	5.94435	55.2666	chromosome:NZ_CP021329.1/CP021329.1; plasmid pRo24724:NZ_CP021328.1/CP021328.1	-	2	5785	5463	7/5/17	7/7/17	Complete Genome	Zhejiang University	SAMN06909736	GCA_002214825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/825/GCA_002214825.1_ASM221482v1	-	Ro24724
Citrobacter sp. 30_2	469595	PRJNA389368	389368	Proteobacteria	Gammaproteobacteria	4.94524	51.9	chromosome:CP022311.1	-	1	-	-	7/6/17	7/6/17	Chromosome	Rehman Medical Institute	SAMN07196160	GCA_002215605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/605/GCA_002215605.1_ASM221560v1	-	30_2
Gloeocapsa sp. PCC 73106	102232	PRJNA159497	159497	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.02511	41.1	-	ALVY01	228	4036	3727	1/17/13	4/17/17	Contig	JGI	SAMN02261353	GCA_000332035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/035/GCA_000332035.1_ASM33203v1	23277585	PCC 73106
Pleurocapsa sp. PCC 7319	118161	PRJNA158813	158813	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.387	38.7	-	ALVL01	10	6525	6258	1/17/13	4/17/17	Scaffold	JGI	SAMN02261343	GCA_000332195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/195/GCA_000332195.1_ASM33219v1	23277585	PCC 7319
Klebsiella oxytoca	571	PRJNA246471	246471	Proteobacteria	Gammaproteobacteria	7.22729	55.2606	chromosome:NZ_CP011636.1/CP011636.1; plasmid pCAV1374-14:NZ_CP011627.1/CP011627.1; plasmid pCAV1374-150:NZ_CP011633.1/CP011633.1; plasmid pCAV1374-16:NZ_CP011628.1/CP011628.1; plasmid pCAV1374-1919:NZ_CP011625.1/CP011625.1; plasmid pCAV1374-228:NZ_CP011634.1/CP011634.1; plasmid pCAV1374-34:NZ_CP011629.1/CP011629.1; plasmid pCAV1374-49:NZ_CP011630.1/CP011630.1; plasmid pCAV1374-54:NZ_CP011631.1/CP011631.1; plasmid pCAV1374-6538:NZ_CP011626.1/CP011626.1; plasmid pCAV1374-84:NZ_CP011632.1/CP011632.1; plasmid pKPC_CAV1374:NZ_CP011635.1/CP011635.1	-	12	7232	6791	6/9/15	2/21/17	Complete Genome	University of Oxford	SAMN03733738	GCA_001022195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/195/GCA_001022195.1_ASM102219v1	-	CAV1374
Geitlerinema sp. PCC 7105	102127	PRJNA158727	158727	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.15235	51.5	-	ANFQ01	8	5228	4822	1/18/13	4/17/17	Scaffold	JGI	SAMN02261249	GCA_000332355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/355/GCA_000332355.1_ASM33235v1	23277585	PCC 7105
Pseudanabaena sp. PCC 6802	118173	PRJNA158731	158731	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.62188	47.8	-	ALVK01	6	5265	4984	1/17/13	4/17/17	Scaffold	JGI	SAMN02261339	GCA_000332175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/175/GCA_000332175.1_ASM33217v1	23277585	PCC 6802
Candidatus Aquiluna sp. IMCC13023	1081644	PRJNA72843	72843	Terrabacteria group	Actinobacteria	1.35986	51.7	-	AJKR01	6	1386	1323	4/5/12	4/7/17	Contig	Inha University	SAMN02469920	GCA_000257665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/665/GCA_000257665.1_ASM25766v1	22689238	IMCC13023
Rahnella sp. WP5	1500266	PRJNA247595	247595	Proteobacteria	Gammaproteobacteria	5.44411	52.1	-	JQJR01	32	5080	4878	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02787083	GCA_000745615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/615/GCA_000745615.1_ASM74561v1	-	WP5
Enterobacter hormaechei	158836	PRJNA246471	246471	Proteobacteria	Gammaproteobacteria	5.04309	55.2007	chromosome:CP011662.1; chromosome unnamed :CP011660.1; plasmid pCAV1176-3223:CP011658.1; plasmid pCAV1176-34:CP011659.1; plasmid pKPC_CAV1176:CP011661.1	-	5	4846	4649	7/15/16	7/15/16	Complete Genome	University of Oxford	SAMN03733727	GCA_001874505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/505/GCA_001874505.1_ASM187450v1	-	CAV1176
Serratia liquefaciens	614	PRJNA281037	281037	Proteobacteria	Gammaproteobacteria	5.32666	55.2	chromosome:NZ_CP011303.1/CP011303.1	-	1	5044	4863	4/21/15	4/10/17	Complete Genome	"Veterinary Immunology Group and Animal Production, University Institute of Animal Health"	SAMN03481691	GCA_000975245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/975/245/GCA_000975245.1_ASM97524v1	26021922	HUMV-21
Methanoregula formicica SMSP	593750	PRJNA63567	63567	Euryarchaeota	Methanomicrobia	2.82086	55.2	chromosome:NC_019943.1/CP003167.1	-	1	2876	2789	12/21/12	9/4/17	Complete Genome	DOE Joint Genome Institute	SAMN02232038	GCA_000327485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/485/GCA_000327485.1_ASM32748v1	25189582	SMSP
Methylosinus sp. PW1	107636	PRJNA195836	195836	Proteobacteria	Alphaproteobacteria	5.12879	64.7	-	JQNK01	12	4903	4653	8/28/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02746043	GCA_000745215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/215/GCA_000745215.1_ASM74521v1	-	PW1
Treponema sp. C6A8	1410609	PRJNA223484	223484	Spirochaetes	Spirochaetia	2.86949	40.7	-	JHVB01	23	2556	2479	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02952981	GCA_000619925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/925/GCA_000619925.1_ASM61992v1	-	C6A8
Novosphingobium sp. B-7	1298855	PRJNA190714	190714	Proteobacteria	Alphaproteobacteria	4.90916	64.9	-	APCQ01	491	4685	3950	6/6/13	4/10/17	Scaffold	"Environmental engineering institut, Central south university, Hunan Province, China"	SAMN02469431	GCA_000410615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/615/GCA_000410615.1_ASM41061v1	22921251	B-7
Methylophilus sp. 1	1112273	PRJNA171851	171851	Proteobacteria	Betaproteobacteria	2.96915	50.4	-	ARFK01	1	2834	2766	4/19/13	6/20/17	Scaffold	DOE Joint Genome Institute	SAMN02440439	GCA_000374225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/225/GCA_000374225.1_ASM37422v1	-	1
Deinococcus sp. 2009	684949	PRJNA157079	157079	Terrabacteria group	Deinococcus-Thermus	4.01938	69.7	-	ATTJ01	6	3800	3670	7/9/13	4/17/17	Contig	JGI	SAMN02441593	GCA_000419625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/625/GCA_000419625.1_ASM41962v1	-	2009
Methylomonas sp. 11b	1168169	PRJNA157071	157071	Proteobacteria	Gammaproteobacteria	5.41272	51.4	-	AZXK01	1	5037	4856	1/3/14	4/9/17	Scaffold	JGI	SAMN02597267	GCA_000515215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/215/GCA_000515215.1_ASM51521v1	25767239	11b
Octadecabacter arcticus 238	391616	PRJNA19331	19331	Proteobacteria	Alphaproteobacteria	5.47825	55.1917	chromosome:NC_020908.1/CP003742.1; plasmid pOA238_118:NC_020909.1/CP003743.1; plasmid pOA238_160:NC_020910.1/CP003744.1	-	3	5698	5047	4/8/13	5/19/17	Complete Genome	Moore Foundation	SAMN02603620	GCA_000155735.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/735/GCA_000155735.2_ASM15573v2	23671678	238
Enterococcus sp. HMSC29A04	1581068	PRJNA269837	269837	Terrabacteria group	Firmicutes	4.32179	39.2	-	LWOS01	120	4298	4115	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436224	GCA_001806895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/895/GCA_001806895.1_ASM180689v1	-	HMSC29A04
Prevotella sp. oral taxon 317 str. F0108	575615	PRJNA38521	38521	FCB group	Bacteroidetes/Chlorobi group	4.0991	47.1	-	ACQH01	61	3097	2864	1/8/10	4/17/17	Scaffold	Broad Institute	SAMN02595329	GCA_000162415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/415/GCA_000162415.1_ASM16241v1	-	F0108
Moorella thermoacetica	1525	PRJNA329441	329441	Terrabacteria group	Firmicutes	2.97608	55.1	chromosome:NZ_CP017019.1/CP017019.1	-	1	3027	2853	9/16/16	4/5/17	Complete Genome	Technical University of Denmark	SAMN05412808	GCA_001729945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/945/GCA_001729945.1_ASM172994v1	-	DSM 103132
Gillisia sp. JM1	1283286	PRJNA186465	186465	FCB group	Bacteroidetes/Chlorobi group	4.14361	34.9	-	AUKH01	9	3726	3534	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441483	GCA_000424645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/645/GCA_000424645.1_ASM42464v1	-	JM1
Rugosibacter aromaticivorans	1565605	PRJNA264992	264992	Proteobacteria	Betaproteobacteria	2.93461	55.1	chromosome:CP010554.1	-	1	2859	2457	2/25/15	1/13/17	Complete Genome	University of North Carolina - Chapel Hill	SAMN03144834	GCA_000934545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/545/GCA_000934545.1_ASM93454v1	-	Ca6
Cedecea neteri	158822	PRJNA258438	258438	Proteobacteria	Gammaproteobacteria	4.87644	55.1	chromosome:NZ_CP009451.1/CP009451.1	-	1	4617	4417	9/25/14	4/9/17	Complete Genome	University of Malaya	SAMN03003593	GCA_000757825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/825/GCA_000757825.1_ASM75782v1	25523782	SSMD04
Thermus sp. NMX2.A1	570924	PRJNA168338	168338	Terrabacteria group	Deinococcus-Thermus	2.29271	65.3	-	ATNI01	132	2482	2309	12/23/13	4/17/17	Contig	University of the Free State	SAMN02205323	GCA_000511705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/705/GCA_000511705.1_TNMX1.0	-	NMX2.A1
Sulfurovum sp. AR	1165841	PRJDB84	156679	Proteobacteria	delta/epsilon subdivisions	2.12577	39.2	-	AJLE01	11	2161	2091	4/27/12	4/7/17	Contig	Chungbuk National University	SAMN02469595	GCA_000296775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/775/GCA_000296775.1_ASM29677v1	22815446	AR
Polaromonas sp. CF318	1144318	PRJNA83059	83059	Proteobacteria	Betaproteobacteria	5.00882	64.9	-	AKIV01	159	4794	4621	7/27/12	5/19/17	Contig	Oak Ridge National Lab	SAMN00839626	GCA_000282655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/655/GCA_000282655.1_Polaromonas.strCF318_v1.0	23045501	CF318
Enterobacter cloacae subsp. cloacae ENHKU01	1211025	PRJNA170442	170442	Proteobacteria	Gammaproteobacteria	4.72658	55.1	chromosome:NC_018405.1/CP003737.1	-	1	4567	4326	8/10/12	3/23/17	Complete Genome	The University of Hong Kong	SAMN02603959	GCA_000286275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/275/GCA_000286275.1_ASM28627v1	23045485	ENHKU01
Nocardiopsis sp. CNT312	1137268	PRJNA169714	169714	Terrabacteria group	Actinobacteria	4.68147	71.1	-	AZXF01	62	4250	4023	1/3/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02597262	GCA_000515115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/115/GCA_000515115.1_ASM51511v1	-	CNT312
Enterobacter cloacae subsp. dissolvens SDM	1104326	PRJNA74737	74737	Proteobacteria	Gammaproteobacteria	4.96825	55.1	chromosome:NC_018079.1/CP003678.1	-	1	4771	4527	6/20/12	3/23/17	Complete Genome	life science academy	SAMN02603521	GCA_000235765.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/765/GCA_000235765.3_ASM23576v3	22275097	SDM
Thermoproteus tenax Kra 1	768679	PRJEA49419	49419	TACK group	Crenarchaeota	1.84154	55.1	chromosome:NC_016070.1/FN869859.1	-	1	2047	1959	10/6/11	8/21/15	Complete Genome	"University of Duisburg-Essen, Faculty of Chemistry, Molecular Enzyme Technology and Biochemistry"	SAMEA2272453	GCA_000253055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/055/GCA_000253055.1_ASM25305v1	22003381	Kra 1
Bifidobacterium sp. AGR2158	1280675	PRJNA185699	185699	Terrabacteria group	Actinobacteria	2.19008	64.2	-	AUJM01	19	1790	1694	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441493	GCA_000424225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/225/GCA_000424225.1_ASM42422v1	-	AGR2158
Pyrobaculum arsenaticum DSM 13514	340102	PRJNA15582	15582	TACK group	Crenarchaeota	2.12108	55.1	chromosome:CP000660.1	-	1	2407	2298	4/16/07	1/28/14	Complete Genome	DOE Joint Genome Institute	SAMN02598330	GCA_000016385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/385/GCA_000016385.1_ASM1638v1	-	DSM 13514
Pelobacter carbinolicus DSM 2380	338963	PRJNA13337	13337	Proteobacteria	delta/epsilon subdivisions	3.66589	55.1	chromosome:NC_007498.2/CP000142.2	-	1	3293	3197	10/12/05	4/6/17	Complete Genome	DOE Joint Genome Institute	SAMN02598295	GCA_000012885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/885/GCA_000012885.1_ASM1288v1	23227809	DSM 2380
Pantoea vagans C9-1	712898	PRJNA43531	43531	Proteobacteria	Gammaproteobacteria	4.88834	55.0916	chromosome:NC_014562.1/CP002206.1; plasmid pPag1:NC_014561.1/CP001893.1; plasmid pPag2:NC_014563.1/CP001894.1; plasmid pPag3:NC_014258.1/CP001895.1	-	4	4613	4353	10/1/10	4/7/17	Complete Genome	Forschungsanstalt Agroscope Changins-Wädenswil ACW	SAMN02603237	GCA_000148935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/935/GCA_000148935.1_ASM14893v1	20952567	C9-1
Pantoea agglomerans	549	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.80881	55.0907	chromosome:NZ_CP014129.1/CP014129.1; plasmid unnamed1:NZ_CP014126.1/CP014126.1; plasmid unnamed2:NZ_CP014127.1/CP014127.1; plasmid unnamed3:NZ_CP014128.1/CP014128.1	-	4	4596	4283	2/11/16	4/4/17	Complete Genome	US Food and Drug Administration 	SAMN03996307	GCA_001558735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/735/GCA_001558735.1_ASM155873v1	-	FDAARGOS_160
Nocardia sp. 348MFTsu5.1	1172185	PRJNA187945	187945	Terrabacteria group	Actinobacteria	5.71155	63.9	-	ARTM01	35	5333	5175	4/26/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440967	GCA_000383535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/535/GCA_000383535.1_ASM38353v1	-	348MFTsu5.1
Leptospirillum sp. YQP-1	1502095	PRJNA291527	291527	Nitrospirae	Nitrospira	3.10379	58.6	-	LIEB01	85	3166	2947	10/9/15	4/11/17	Scaffold	Heilongjiang Bayi Agricultural University	SAMN03945279	GCA_001308895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/308/895/GCA_001308895.1_ASM130889v1	26697362	YQP-1
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.05615	55.0886	chromosome:NZ_CP010384.1/CP010384.1; plasmid p34399-106.698kb:NZ_CP010385.1/CP010385.1; plasmid p34399-121.660kb:NZ_CP010386.1/CP010386.1; plasmid p34399-43.500kb:NZ_CP010387.1/CP010387.1	-	4	4975	4732	1/5/15	3/25/17	Complete Genome	JCVI	SAMN03067418	GCA_000814225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/225/GCA_000814225.1_ASM81422v1	-	34399
Enterobacter cloacae	550	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	5.13201	55.0746	chromosome:NZ_CP021776.1/CP021776.1; plasmid unitig_2:NZ_CP021777.1/CP021777.1; plasmid unitig_3:NZ_CP021778.1/CP021778.1; plasmid unitig_4:NZ_CP021779.1/CP021779.1	-	4	5135	4847	6/13/17	6/15/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014894	GCA_002192395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/395/GCA_002192395.1_ASM219239v1	-	AR_0053
Escherichia sp. 4_1_40B	457401	PRJNA32467	32467	Proteobacteria	Gammaproteobacteria	4.91121	50.5	-	ACDM02	8	5172	4759	2/18/09	2/22/17	Scaffold	Broad Institute	SAMN02463705	GCA_000158415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/415/GCA_000158415.2_Escherichia_sp_4_1_40B_V2	-	4_1_40B
Enterobacter cloacae	550	PRJNA292901	292901	Proteobacteria	Gammaproteobacteria	5.02198	55.0693	chromosome:NZ_CP018814.1/CP018814.1; plasmid tig00000003:NZ_CP018815.1/CP018815.1	-	2	4967	4686	12/27/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014843	GCA_001922365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/365/GCA_001922365.1_ASM192236v1	-	AR_0002
Pyrobaculum oguniense TE7	698757	PRJNA42375	42375	TACK group	Crenarchaeota	2.45292	55.069	chromosome:CP003316.1; plasmid extrachromosomal element:CP003317.1	-	2	3014	2835	2/10/12	1/31/14	Complete Genome	UCSC-Lowelab	SAMN02604076	GCA_000247545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/545/GCA_000247545.1_ASM24754v1	-	TE7
Staphylococcus sp. HGB0015	1078083	PRJNA72485	72485	Terrabacteria group	Firmicutes	2.47882	36.1	-	AGEO01	4	2330	2154	6/13/13	4/8/17	Scaffold	Broad Institute	SAMN02596732	GCA_000411275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/275/GCA_000411275.1_Stap_sp_HGB0015_V1	-	HGB0015
Klebsiella aerogenes	548	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.29778	55.052	chromosome:NZ_CP014748.1/CP014748.1; plasmid unnamed:NZ_CP014747.1/CP014747.1	-	2	5191	4907	3/17/16	4/5/17	Complete Genome	US Food and Drug Administration 	SAMN03996283	GCA_001593585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/585/GCA_001593585.1_ASM159358v1	-	FDAARGOS_139
Serratia proteamaculans 568	399741	PRJNA17459	17459	Proteobacteria	Gammaproteobacteria	5.49566	55.0498	chromosome:NC_009832.1/CP000826.1; plasmid pSPRO01:NC_009829.1/CP000827.1	-	2	5198	4999	9/18/07	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598393	GCA_000018085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/085/GCA_000018085.1_ASM1808v1	-	568
Enterobacter cloacae	550	PRJNA251385	251385	Proteobacteria	Gammaproteobacteria	4.92744	55.0476	chromosome:NZ_CP009854.1/CP009854.1; plasmid pENT-22e:NZ_CP009855.1/CP009855.1; plasmid pENT-784:NZ_CP009856.1/CP009856.1; plasmid pENT-d0d:NZ_CP009857.1/CP009857.1; plasmid pKPC-47e:NZ_CP009858.1/CP009858.1	-	5	4863	4544	11/17/14	6/28/17	Complete Genome	NIH	SAMN02821151	GCA_000784905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/905/GCA_000784905.1_ASM78490v1	25232178	ECNIH5
Natrinema sp. J7-1	1172566	PRJNA157873	157873	Euryarchaeota	Halobacteria	3.66762	64.4	-	AJVG01	42	3693	3465	6/17/13	4/9/17	Contig	Wuhan University	SAMN02472127	GCA_000493245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/245/GCA_000493245.1_Nat_J71	-	J7-1
Halobacterium sp. CBA1132	1765057	PRJDB4411	305390	Euryarchaeota	Halobacteria	3.01281	66	-	BCMZ01	4	3163	3024	12/19/15	4/11/17	Contig	Korea Basic Science Institute	SAMD00043969	GCA_001485535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/535/GCA_001485535.1_ASM148553v1	-	CBA1132
Erwinia billingiae Eb661	634500	PRJEA34781	34781	Proteobacteria	Gammaproteobacteria	5.37227	55.0417	chromosome:NC_014306.1/FP236843.1; plasmid pEB102:NC_014304.1/FP236826.1; plasmid pEB170:NC_014305.1/FP236830.1	-	3	5010	4828	6/22/10	4/7/17	Complete Genome	Max Planck Society	SAMEA2272131	GCA_000196615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/615/GCA_000196615.1_ASM19661v1	20565991	Eb661
Enterobacter cloacae	550	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	5.04041	55.0185	chromosome:NZ_CP021902.1/CP021902.1; plasmid tig00001437_pilon:NZ_CP021900.1/CP021900.1; plasmid tig00001456_pilon:NZ_CP021901.1/CP021901.1	-	3	5028	4731	6/20/17	6/24/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014977	GCA_002204775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/775/GCA_002204775.1_ASM220477v1	-	AR_0136
Ruegeria sp. R11	439497	PRJNA19365	19365	Proteobacteria	Alphaproteobacteria	3.82184	60	-	ABXM01	2	3589	3473	9/30/08	4/17/17	Scaffold	Gordon and Betty Moore Foundation Microbial Genome Sequencing Project	SAMN02436181	GCA_000156255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/255/GCA_000156255.1_ASM15625v1	-	R11
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.16099	55.0167	chromosome:NZ_CP012165.1/CP012165.1; plasmid p34978-13.828kb:NZ_CP010366.2/CP010366.2; plasmid p34978-139.941kb:NZ_CP010363.1/CP010363.1; plasmid p34978-2.725kb:NZ_CP012166.1/CP012166.1; plasmid p34978-4.938kb:NZ_CP010364.1/CP010364.1; plasmid p34978-5.413kb:NZ_CP010367.1/CP010367.1; plasmid p34978-70.092kb:NZ_CP010365.1/CP010365.1	-	7	5149	4869	7/30/15	3/26/17	Complete Genome	JCVI	SAMN03067415	GCA_000807405.4	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/405/GCA_000807405.4_ASM80740v4	-	34978
Pantoea agglomerans	549	PRJNA335437	335437	Proteobacteria	Gammaproteobacteria	5.11524	55.0152	chromosome:NZ_CP016889.1/CP016889.1; plasmid unnamed1:NZ_CP016890.1/CP016890.1; plasmid unnamed2:NZ_CP016891.1/CP016891.1; plasmid unnamed3:NZ_CP016892.1/CP016892.1	-	4	4847	4422	8/19/16	4/5/17	Complete Genome	Anhui University	SAMN05444153	GCA_001709315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/315/GCA_001709315.1_ASM170931v1	-	C410P1
Thermococcus siculi	72803	PRJNA274230	274230	Euryarchaeota	Thermococci	2.02917	55	chromosome:NZ_CP015103.1/CP015103.1	-	1	2170	2099	7/5/17	7/7/17	Complete Genome	Ecole Normale Superieure de Lyon	SAMN03324165	GCA_002214505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/505/GCA_002214505.1_ASM221450v1	-	RG-20
Kluyvera georgiana	73098	PRJNA391375	391375	Proteobacteria	Gammaproteobacteria	5.00614	55	chromosome:CP022114.1	-	1	5006	2237	6/30/17	6/30/17	Complete Genome	University of Pittsburgh	SAMN07267279	GCA_002211745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/745/GCA_002211745.1_ASM221174v1	-	YDC799
Frankia sp. QA3	710111	PRJNA63325	63325	Terrabacteria group	Actinobacteria	7.59085	72.55	chromosome:NZ_CM001489.1/CM001489.1	AJWA01	1	6366	5837	5/8/12	5/18/17	Chromosome	DOE Joint Genome Institute	SAMN02256510	GCA_000262465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/465/GCA_000262465.1_ASM26246v1	23516220	QA3
Mastigocoleus testarum BC008	371196	PRJNA163055	163055	Terrabacteria group	Cyanobacteria/Melainabacteria group	15.8671	48.2	-	AXAQ01	975	-	-	9/30/13	12/12/13	Scaffold	DOE Joint Genome Institute	SAMN02440714	GCA_000472885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/885/GCA_000472885.1_ASM47288v1	-	BC008
Streptomyces tsukubensis	83656	PRJNA374465	374465	Terrabacteria group	Actinobacteria	8.50413	70.5	-	MVFC01	127	6955	6540	2/27/17	3/2/17	Contig	Shandong Academy of Medical Sciences	SAMN06323803	GCA_002007125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/125/GCA_002007125.1_ASM200712v1	-	F601
Bacillus altitudinis	293387	PRJNA271315	271315	Terrabacteria group	Firmicutes	3.81251	41.1	-	JXAI01	61	3928	3820	3/10/15	4/10/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN03273925	GCA_000949525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/525/GCA_000949525.1_ASM94952v1	-	DSM 26896
Flavobacterium sp. Fl	1506583	PRJNA251770	251770	FCB group	Bacteroidetes/Chlorobi group	5.28406	33.4	-	JQJY01	21	4577	4443	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02850021	GCA_000745775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/775/GCA_000745775.1_ASM74577v1	25700420	Fl
Betaproteobacteria bacterium UKL13-2	1690485	PRJNA312233	312233	Proteobacteria	Betaproteobacteria	3.38709	55	chromosome:CP012157.1	-	1	3087	2772	3/30/16	3/30/16	Complete Genome	Oregon State University	SAMN03894415	GCA_001602455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/455/GCA_001602455.1_ASM160245v1	-	-
Glycomyces tenuis	58116	PRJNA238534	238534	Terrabacteria group	Actinobacteria	6.03269	68.8	-	JNYS01	85	6055	4762	7/1/14	4/9/17	Scaffold	University of Illinois	SAMN02645320	GCA_000715885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/885/GCA_000715885.1_ASM71588v1	-	NRRL B-16895
Klebsiella aerogenes	548	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.31705	55	chromosome:NZ_CP014029.1/CP014029.1	-	1	5249	4920	2/11/16	4/4/17	Complete Genome	US Food and Drug Administration 	SAMN03996296	GCA_001559215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/215/GCA_001559215.1_ASM155921v1	-	FDAARGOS_152
Enterobacter cloacae	550	PRJNA259401	259401	Proteobacteria	Gammaproteobacteria	4.84875	55	chromosome:NZ_CP009756.1/CP009756.1	-	1	4667	4469	10/31/14	3/25/17	Complete Genome	Korea Institute of Science and Technology	SAMN03005138	GCA_000770155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/155/GCA_000770155.1_ASM77015v1	-	GGT036
Lysinibacillus boronitolerans JCM 21713 = 10a = NBRC 103108	1294264	PRJNA214584	214584	Terrabacteria group	Firmicutes	4.56415	37.6	-	AVCW01	81	4528	4387	6/19/17	6/22/17	Contig	Huazhong Agricultural University	SAMN07255466	GCA_002200915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/915/GCA_002200915.1_ASM220091v1	-	NBRC 103108
Staphylococcus lentus	42858	PRJNA311173	311173	Terrabacteria group	Firmicutes	2.64443	31.9	-	LSKY01	98	2586	2490	5/25/16	4/12/17	Contig	Nofima	SAMN04479464	GCA_001651255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/255/GCA_001651255.1_ASM165125v1	27375578	MF1862
Thalassospira lucentensis	168935	PRJNA305768	305768	Proteobacteria	Alphaproteobacteria	4.55459	54.9	-	LPVY01	25	4242	4153	4/7/16	4/12/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN04332629	GCA_001613805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/805/GCA_001613805.1_ASM161380v1	-	MCCC 1A02072
Amycolatopsis alba DSM 44262	1125972	PRJNA392996	392996	Terrabacteria group	Actinobacteria	9.5413	68.7	-	NMQU01	308	8740	8410	7/27/17	8/1/17	Contig	Institute of Microbial Technology	SAMN07313382	GCA_002234385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/234/385/GCA_002234385.1_ASM223438v1	-	DSM 44262
Thalassospira profundimaris	502049	PRJNA161565	161565	Proteobacteria	Alphaproteobacteria	4.66209	54.9	-	JPWE01	34	4315	4232	6/14/16	4/12/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02927980	GCA_001662835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/835/GCA_001662835.1_ASM166283v1	-	PB8B
Thalassospira xiamenensis	220697	PRJNA305770	305770	Proteobacteria	Alphaproteobacteria	4.7541	54.8	-	LPVW01	30	4434	4334	4/7/16	4/12/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN04332631	GCA_001613855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/855/GCA_001613855.1_ASM161385v1	-	MCCC 1A02795
Bacillus siamensis	659243	PRJNA278845	278845	Terrabacteria group	Firmicutes	3.71407	46.3	-	LAGT01	63	3745	3480	3/31/15	4/10/17	Contig	NCAUR-ARS-USDA	SAMN03433697	GCA_000966575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/575/GCA_000966575.1_ASM96657v1	26296875	XY18
Catenovulum agarivorans DS-2	1328313	PRJNA200359	200359	Proteobacteria	Gammaproteobacteria	4.57242	40.7	-	ARZY01	143	3888	3735	2/11/14	4/9/17	Contig	State Oceanic Administration	SAMN02952949	GCA_000568405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/405/GCA_000568405.1_DS-2	24604650	DS-2
Micavibrio aeruginosavorus EPB	349215	PRJNA163341	163341	Proteobacteria	Alphaproteobacteria	2.45861	55	chromosome:NC_020812.1/CP003538.1	-	1	2337	2284	3/25/13	4/8/17	Complete Genome	Weizmann Institute of Science	SAMN02604326	GCA_000348745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/745/GCA_000348745.1_ASM34874v1	23190728	EPB
Oribacterium sp. NK2B42	689781	PRJNA185718	185718	Terrabacteria group	Firmicutes	3.79048	43	-	AUJX01	95	3349	3136	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441162	GCA_000424445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/445/GCA_000424445.1_ASM42444v1	-	NK2B42
Pseudomonas kilonensis	132476	PRJNA290438	290438	Proteobacteria	Gammaproteobacteria	6.38932	60.8	-	LHVG01	44	5791	5573	8/18/15	4/11/17	Contig	JLU	SAMN03891673	GCA_001269725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/725/GCA_001269725.1_ASM126972v1	-	P12
Streptomyces globisporus subsp. globisporus	66858	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.45453	71.7	-	JNZK01	84	6744	6304	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645339	GCA_000718455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/455/GCA_000718455.1_ASM71845v1	-	NRRL B-2709
Dehalogenimonas lykanthroporepellens BL-DC-9	552811	PRJNA40221	40221	Terrabacteria group	Chloroflexi	1.68651	55	chromosome:NC_014314.1/CP002084.1	-	1	1732	1650	6/25/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598529	GCA_000143165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/143/165/GCA_000143165.1_ASM14316v1	22768368	BL-DC-9
Marinilabilia salmonicolor JCM 21150	1168289	PRJDB629	243205	FCB group	Bacteroidetes/Chlorobi group	4.97154	41.9	-	BALK01	105	4044	3340	4/1/14	4/17/17	Contig	The University of Tokyo	SAMD00012206	GCA_000614895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/895/GCA_000614895.1_ASM61489v1	-	JCM 21150
Dickeya paradisiaca Ech703	579405	PRJNA33069	33069	Proteobacteria	Gammaproteobacteria	4.67945	55	chromosome:CP001654.1	-	1	4137	3970	6/26/09	3/10/15	Complete Genome	US DOE Joint Genome Institute	SAMN02598494	GCA_000023545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/545/GCA_000023545.1_ASM2354v1	-	Ech703
Paeniclostridium sordellii VPI 9048	1292035	PRJNA188694	188694	Terrabacteria group	Firmicutes	3.57199	27.3	-	AQGJ01	166	3429	3335	8/5/13	4/1/17	Contig	Kansas State University	SAMN02470118	GCA_000444095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/095/GCA_000444095.1_ASM44409v1	23873908	VPI 9048
Klebsiella aerogenes	548	PRJNA246471	246471	Proteobacteria	Gammaproteobacteria	5.13897	54.9992	chromosome:NZ_CP011574.1/CP011574.1; plasmid pKPC_CAV1320:NZ_CP011573.1/CP011573.1	-	2	5059	4805	6/9/15	9/25/17	Complete Genome	University of Oxford	SAMN03733745	GCA_001021995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/995/GCA_001021995.1_ASM102199v1	-	CAV1320
Sulfuriferula sp. AH1	1985873	PRJNA385486	385486	Proteobacteria	Betaproteobacteria	2.91615	54.9792	chromosome:NZ_CP021138.1/CP021138.1; plasmid unnamed:NZ_CP021139.1/CP021139.1	-	2	2941	2818	5/31/17	6/2/17	Complete Genome	University of Minnesota	SAMN06891141	GCA_002162035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/035/GCA_002162035.1_ASM216203v1	-	AH1
Desulfovibrio alaskensis DSM 16109	1121436	PRJNA188879	188879	Proteobacteria	delta/epsilon subdivisions	3.55396	58	-	AXWQ01	26	3307	3202	10/25/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441442	GCA_000482745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/745/GCA_000482745.1_ASM48274v1	-	DSM 16109
Mycobacterium phlei RIVM601174	1150599	PRJNA84347	84347	Terrabacteria group	Actinobacteria	5.68195	69.2	-	AJFJ01	102	5644	5404	4/5/12	5/19/17	Contig	KAUST	SAMN02470133	GCA_000257725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/725/GCA_000257725.1_ASM25772v1	22628511	RIVM601174
Mycobacterium xenopi RIVM700367	1150591	PRJNA84345	84345	Terrabacteria group	Actinobacteria	4.43484	66.1	-	AJFI01	117	4300	4029	4/5/12	5/19/17	Contig	KAUST	SAMN02470128	GCA_000257745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/745/GCA_000257745.1_ASM25774v1	22628510	RIVM700367
Lactococcus piscium	1364	PRJEB11218	329060	Terrabacteria group	Firmicutes	2.25707	38.6817	chromosome I:NZ_LT603685.1/LT603685.1; plasmid II:NZ_LT603686.1/LT603686.1	FLZT01	2	4518	4258	7/28/16	3/18/17	Chromosome	INRA ONIRIS	SAMEA4356845	GCA_900094145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/145/GCA_900094145.1_CNCM_I-4031	-	CNCM I-4031
Rhodococcus imtechensis RKJ300 = JCM 13270	1165867	PRJDB929	245953	Terrabacteria group	Actinobacteria	8.21067	66.5	-	BBFO01	3487	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016929	GCA_001313285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/285/GCA_001313285.1_ASM131328v1	-	JCM 13270
Richelia intracellularis HM01	1165095	PRJEA104981	104981	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.21291	33.8	-	CAIS01	941	1372	1108	2/12/13	4/8/17	Contig	UC-Santa Cruz	SAMEA2272302	GCA_000350125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/125/GCA_000350125.1_ASM35012v1	-	HM01
Pseudoalteromonas flavipulchra NCIMB 2033 = ATCC BAA-314	1315273	PRJNA266989	266989	Proteobacteria	Gammaproteobacteria	4.50153	39.2	-	JTDZ01	40	4071	3886	12/17/14	4/10/17	Scaffold	University of Missouri	SAMN03176941	GCA_000803085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/085/GCA_000803085.1_PS0106	25953181	ATCC BAA-314
Fischerella muscicola SAG 1427-1 = PCC 73103	372781	PRJNA104965	104965	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.36026	40.3	-	AJLJ01	524	6293	5794	12/5/12	5/18/17	Contig	Heinrich-Heine-University Duesseldorf	SAMN02469881	GCA_000317245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/245/GCA_000317245.1_FisPCC73103_1.0	23221676	SAG 1427-1 = PCC 73103
Actinosynnema pretiosum subsp. auranticum	42198	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.96532	73.9	-	JNYA01	3514	-	-	7/1/14	7/1/14	Contig	University of Illinois	SAMN02645301	GCA_000716705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/705/GCA_000716705.1_ASM71670v1	-	NRRL B-16078
Chlorogloeopsis fritschii PCC 9212	184925	PRJNA104963	104963	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.64985	41.5	-	AJLM01	188	6620	6414	12/5/12	5/18/17	Contig	Heinrich-Heine-University Duesseldorf	SAMN02469882	GCA_000317265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/265/GCA_000317265.1_ChlPCC9212_1.0	23221676	PCC 9212
Enterobacter cloacae	550	PRJNA251384	251384	Proteobacteria	Gammaproteobacteria	4.94644	54.9683	chromosome:NZ_CP009850.1/CP009850.1; plasmid pENT-c88:NZ_CP009851.1/CP009851.1; plasmid pENT-e56:NZ_CP009852.1/CP009852.1; plasmid pKPC-860:NZ_CP009853.1/CP009853.1	-	4	4842	4560	11/17/14	3/25/17	Complete Genome	NIH	SAMN02821150	GCA_000784865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/865/GCA_000784865.1_ASM78486v1	25232178	ECNIH4
Cronobacter condimenti 1330	1073999	PRJEB164	181121	Proteobacteria	Gammaproteobacteria	4.48062	55.8	-	CAKW01	155	4335	3704	11/15/12	5/18/17	Contig	LifeTech	SAMEA2272515	GCA_000319285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/285/GCA_000319285.1_ASM31928v1	23166675	1330
Enterobacter kobei	208224	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.92748	54.9521	chromosome:NZ_CP017181.1/CP017181.1; plasmid pDSMZ13645:NZ_CP017182.1/CP017182.1	-	2	4876	4506	9/16/16	4/5/17	Complete Genome	JCVI	SAMN05581747	GCA_001729765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/765/GCA_001729765.1_ASM172976v1	-	DSM 13645
Cronobacter muytjensii ATCC 51329	1159613	PRJNA89111	89111	Proteobacteria	Gammaproteobacteria	4.32261	57.7	-	AJKU01	72	4133	3919	6/7/13	4/8/17	Contig	Cronobacter Genus Genome Sequencing Consortium	SAMN02952928	GCA_000409285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/285/GCA_000409285.1_Cmuy_final_contigs	23724777	ATCC 51329
Rhodanobacter thiooxydans	416169	PRJNA255808	255808	Proteobacteria	Gammaproteobacteria	4.1317	67.2	-	LVJS01	147	3698	3526	4/8/16	4/12/17	Contig	ENIGMA	SAMN02929138	GCA_001617355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/355/GCA_001617355.1_Rhodanobacter_sp._FW104-T7	27048805	FW104-T7
Haemophilus sputorum HK 2154	1078483	PRJNA89619	89619	Proteobacteria	Gammaproteobacteria	2.08011	39.5	-	ALJP01	25	2030	1946	8/13/12	4/7/17	Contig	JCVI	SAMN00829138	GCA_000287615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/615/GCA_000287615.1_HsputHK2154v1.0	-	HK 2154
Enterobacter cloacae	550	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	4.98955	54.9483	chromosome:NZ_CP021896.1/CP021896.1; plasmid unitig_2_pilon:NZ_CP021897.1/CP021897.1; plasmid unitig_3_pilon:NZ_CP021898.1/CP021898.1; plasmid unitig_4_pilon:NZ_CP021899.1/CP021899.1	-	4	4912	4632	6/20/17	6/22/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014891	GCA_002201815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/815/GCA_002201815.1_ASM220181v1	-	AR_0050
Microbacterium laevaniformans	36807	PRJNA306496	306496	Terrabacteria group	Actinobacteria	2.99996	69.4	-	LRAD01	59	2929	2721	3/9/16	4/12/17	Contig	Public Health Agency of Canada	SAMN04351314	GCA_001584605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/605/GCA_001584605.1_ASM158460v1	-	LCDC 91-0039
Enterobacter cloacae	550	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	5.21582	54.944	chromosome:NZ_CP021749.1/CP021749.1; plasmid tig00000258:NZ_CP021750.1/CP021750.1	-	2	5124	4847	6/13/17	6/15/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04015004	GCA_002192355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/355/GCA_002192355.1_ASM219235v1	-	AR_0163
Mycobacterium haemophilum	29311	PRJNA284995	284995	Terrabacteria group	Actinobacteria	4.36399	63.9	-	LDPR01	60	4140	3844	6/8/15	4/10/17	Contig	UCSF	SAMN03734844	GCA_001021405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/405/GCA_001021405.1_ASM102140v1	-	UC3
Klebsiella aerogenes EA1509E	935296	PRJNA61107	61107	Proteobacteria	Gammaproteobacteria	5.5911	54.9278	chromosome:NC_020181.1/FO203355.1; plasmid pEA1509_A:NC_020182.1/FO203353.1; plasmid pEA1509_B:NC_020180.1/FO203354.1	-	3	5604	5280	1/25/13	4/1/17	Complete Genome	Unité de Recherche sur les Maladies Infectieuses et Tropicales Emergents (URMITE)	SAMEA3138432	GCA_000334515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/515/GCA_000334515.1_ASM33451v1	23071100	EA1509E
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.20925	54.914	chromosome:NZ_CP010376.2/CP010376.2; plasmid p34977-263.138kb:NZ_CP012170.1/CP012170.1; plasmid p34977-43.621kb:NZ_CP010374.1/CP010374.1; plasmid p34977-5.006kb:NZ_CP010375.2/CP010375.2	-	4	5094	4857	1/5/15	3/26/17	Complete Genome	JCVI	SAMN03067414	GCA_000814125.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/125/GCA_000814125.3_ASM81412v3	-	34977
Cronobacter universalis NCTC 9529	1074000	PRJNA89107	89107	Proteobacteria	Gammaproteobacteria	4.334	57.8	-	AJKW01	35	4174	3990	6/7/13	4/8/17	Contig	Cronobacter Genus Genome Sequencing Consortium	SAMN02952930	GCA_000409325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/325/GCA_000409325.1_Cuni9529_final_contigs	23724777	NCTC 9529
Cronobacter dublinensis 1210	1208656	PRJEB161	181119	Proteobacteria	Gammaproteobacteria	4.60063	57.8	-	CAKZ01	221	4508	3718	11/15/12	5/18/17	Contig	LifeTech	SAMEA2272335	GCA_000319345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/345/GCA_000319345.1_ASM31934v1	23166675	1210
Enterococcus gilvus ATCC BAA-350	1158614	PRJNA89013	89013	Terrabacteria group	Firmicutes	4.16214	41.4	-	AJDQ01	25	4118	3939	5/3/13	4/8/17	Scaffold	Broad Institute	SAMN00809202	GCA_000394615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/615/GCA_000394615.1_Ente_gilf_BAA-350_PQ1_CCUG_45553_V1	-	ATCC BAA-350
Enterococcus caccae ATCC BAA-1240	1158612	PRJNA191898	191898	Terrabacteria group	Firmicutes	3.55191	35.8	-	ASVV01	7	3302	3183	5/31/13	4/8/17	Scaffold	Broad Institute	SAMN02596947	GCA_000407145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/145/GCA_000407145.1_Ente_cocc_BAA-1240_V2	-	ATCC BAA-1240
Enterococcus phoeniculicola ATCC BAA-412	1158610	PRJNA88857	88857	Terrabacteria group	Firmicutes	3.93129	36.5	-	AJAT01	9	3579	3454	5/3/13	4/8/17	Scaffold	Broad Institute	SAMN00809120	GCA_000394035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/035/GCA_000394035.1_Ente_phoe_BAA-412_V1	-	ATCC BAA-412
Enterococcus moraviensis ATCC BAA-383	1158609	PRJNA191905	191905	Terrabacteria group	Firmicutes	3.58611	36	-	ASWB01	6	3393	3296	5/31/13	4/8/17	Contig	Broad Institute	SAMN02596953	GCA_000407445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/445/GCA_000407445.1_Ente_mora_BAA-383_V2	-	ATCC BAA-383
Enterococcus haemoperoxidus ATCC BAA-382	1158608	PRJNA88853	88853	Terrabacteria group	Firmicutes	3.58092	35.8	-	AJAR01	3	3277	3146	5/3/13	4/8/17	Scaffold	Broad Institute	SAMN00809117	GCA_000393995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/995/GCA_000393995.1_Ente_haem_BAA-382_V1	-	ATCC BAA-382
Enterococcus pallens ATCC BAA-351	1158607	PRJNA88851	88851	Terrabacteria group	Firmicutes	5.49061	40.1	-	AJAQ01	14	5277	5106	5/3/13	4/8/17	Scaffold	Broad Institute	SAMN00809116	GCA_000393975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/975/GCA_000393975.1_Ente_pall_BAA-351_V1	-	ATCC BAA-351
Enterococcus asini ATCC 700915	1158606	PRJNA88849	88849	Terrabacteria group	Firmicutes	2.59872	44.8	-	AJAP01	11	2460	2350	5/3/13	4/10/17	Scaffold	Broad Institute	SAMN00809115	GCA_000393955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/955/GCA_000393955.1_Ente_asin_ATCC700915_V1	-	ATCC 700915
Enterococcus villorum ATCC 700913	1158604	PRJNA191912	191912	Terrabacteria group	Firmicutes	3.06072	35	-	ASWG01	4	2868	2638	5/31/13	4/8/17	Scaffold	Broad Institute	SAMN02596958	GCA_000407205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/205/GCA_000407205.1_Ente_vill_ATCC700913_V2	-	ATCC 700913
Enterococcus raffinosus ATCC 49464	1158602	PRJNA191911	191911	Terrabacteria group	Firmicutes	4.31037	39.4	-	ASWF01	9	4257	4029	5/31/13	4/8/17	Contig	Broad Institute	SAMN02596957	GCA_000407525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/525/GCA_000407525.1_Ente_raff_ATCC49464_V2	-	ATCC 49464
Enterococcus malodoratus ATCC 43197	1158601	PRJNA88839	88839	Terrabacteria group	Firmicutes	4.65424	40	-	AJAK01	10	4515	4327	5/3/13	4/8/17	Scaffold	Broad Institute	SAMN00809110	GCA_000393875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/875/GCA_000393875.1_Ente_malo_ATCC43197_V1	-	ATCC 43197
Thermococcus sp. P6	122420	PRJNA274230	274230	Euryarchaeota	Thermococci	1.52282	54.9	chromosome:NZ_CP015104.1/CP015104.1	-	1	1649	1568	7/5/17	7/7/17	Complete Genome	Ecole Normale Superieure de Lyon	SAMN03324166	GCA_002214525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/525/GCA_002214525.1_ASM221452v1	-	P6
Methylacidiphilum fumariolicum SolV	1156937	PRJEA85607	85607	PVC group	Verrucomicrobia	2.36542	40.9	-	CAHT01	109	2223	2099	4/5/12	3/15/17	Contig	"Radbaoud University Nijmegen, Department of Microbiology"	SAMEA2272587	GCA_000297415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/415/GCA_000297415.1_ASM29741v1	-	SolV
Bradyrhizobium elkanii USDA 76	398525	PRJNA162247	162247	Proteobacteria	Alphaproteobacteria	9.48477	63.7	-	ARAG01	2	8969	8534	4/22/13	5/18/17	Scaffold	JGI	SAMN02261261	GCA_000379145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/145/GCA_000379145.1_ASM37914v1	-	USDA 76
Anaerolineaceae bacterium oral taxon 439	1889813	PRJNA282954	282954	Terrabacteria group	Chloroflexi	2.94549	54.9	chromosome:NZ_CP017039.1/CP017039.1	-	1	2632	2550	8/31/16	4/13/17	Complete Genome	The Forsyth Institute	SAMN05505093	GCA_001717545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/545/GCA_001717545.1_ASM171754v1	-	W11661
Halomonas sp. R57-5	1610576	PRJEB8412	280072	Proteobacteria	Gammaproteobacteria	5.03157	54.9	chromosome I:NZ_LN813019.1/LN813019.1	-	1	4597	4440	4/2/15	7/29/17	Complete Genome	University of Tromso	SAMEA3245995	GCA_900070345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/070/345/GCA_900070345.1_HalomonasR57-5	-	-
Borrelia crocidurae DOU	1293575	PRJNA189057	189057	Spirochaetes	Spirochaetia	1.767	28.2224	chromosome:NZ_CP004267.1/CP004267.1	-	78	1708	1438	1/27/14	4/9/17	Chromosome	"Rocky Mountain Labs, NIAID, NIH"	SAMN03081453	GCA_000568715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/715/GCA_000568715.1_ASM56871v1	-	DOU
Pseudomonas avellanae CRAFRUec1	1349821	PRJNA209401	209401	Proteobacteria	Gammaproteobacteria	5.73609	59	-	ATLL01	547	5390	4936	7/26/13	4/8/17	Contig	CRA	SAMN02469667	GCA_000441975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/975/GCA_000441975.1_CLC6_0_3	24086635	CRAFRUec1
Klebsiella michiganensis	1134687	PRJNA278789	278789	Proteobacteria	Gammaproteobacteria	5.10763	54.9	chromosome:NZ_CP011077.1/CP011077.1	-	1	4832	4598	3/26/15	2/21/17	Complete Genome	China National Rice Research Institute	SAMN03431443	GCA_000963575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/575/GCA_000963575.1_ASM96357v1	-	RC10
Pyrolobus fumarii 1A	694429	PRJNA48579	48579	TACK group	Crenarchaeota	1.84327	54.9	chromosome:NC_015931.1/CP002838.1	-	1	1969	1906	8/12/11	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02232047	GCA_000223395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/223/395/GCA_000223395.1_ASM22339v1	21886865	1A
Natronorubrum tibetense GA33	1114856	PRJNA174945	174945	Euryarchaeota	Halobacteria	4.92684	62.3	-	AOHW01	59	4739	4519	2/4/13	5/19/17	Contig	"University of California, Davis"	SAMN02471668	GCA_000337235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/235/GCA_000337235.1_ASM33723v1	25393412	GA33
Pseudomonas fuscovaginae UPB0736	1150862	PRJNA84441	84441	Proteobacteria	Gammaproteobacteria	6.70843	60.8	-	AIEU01	102	5714	5454	3/7/12	5/19/17	Scaffold	University of Exeter	SAMN02471737	GCA_000251185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/185/GCA_000251185.1_ASM25118v1	22535942	UPB0736
Glaciecola punicea	56804	PRJNA325684	325684	Proteobacteria	Gammaproteobacteria	3.20174	43.1	-	LZXY01	28	2862	2745	10/11/16	4/13/17	Contig	University of Tasmania	SAMN05250369	GCA_001756615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/615/GCA_001756615.1_ASM175661v1	-	IC056
Sphingomonas phyllosphaerae FA2	1090319	PRJNA84357	84357	Proteobacteria	Alphaproteobacteria	3.9203	67.2	-	ATYK01	2	3584	3466	7/15/13	4/8/17	Scaffold	JGI	SAMN02441573	GCA_000427645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/645/GCA_000427645.1_ASM42764v1	-	FA2
Pseudomonas mandelii	75612	PRJEB16502	349429	Proteobacteria	Gammaproteobacteria	7.04176	59.2	chromosome I:NZ_LT629796.1/LT629796.1	-	1	6527	6236	10/21/16	4/13/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489801	GCA_900106065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/065/GCA_900106065.1_IMG-taxon_2636416004_annotated_assembly	-	LMG 21607
Pelosinus fermentans DSM 17108	1122947	PRJNA84221	84221	Terrabacteria group	Firmicutes	5.02712	39.8	-	AKVN02	2	4670	4485	6/20/12	4/12/17	Contig	ENIGMA 	SAMN01057329	GCA_000271485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/485/GCA_000271485.2_Pelosinus_fermentans_DSM_17108_v1.1	22933770	R7
Sporolactobacillus vineae DSM 21990 = SL153	1123284	PRJDB41	82703	Terrabacteria group	Firmicutes	2.87398	49.5	-	BAEY01	92	2809	2708	2/4/12	4/7/17	Contig	Korea Research Institute of Bioscience and Biotechnology	SAMD00036611	GCA_000246965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/965/GCA_000246965.2_ASM24696v2	22582374	SL153
Bifidobacterium asteroides	1684	PRJNA257133	257133	Terrabacteria group	Actinobacteria	2.09478	60.6	-	JWME01	9	1670	1590	3/31/15	4/10/17	Scaffold	Uppsala university	SAMN03269133	GCA_000967185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/185/GCA_000967185.1_ASM96718v1	-	Bin2
Desulfotomaculum kuznetsovii DSM 6115	760568	PRJNA48313	48313	Terrabacteria group	Firmicutes	3.60139	54.9	chromosome:CP002770.1	-	1	3630	3398	5/24/11	1/8/15	Complete Genome	US DOE Joint Genome Institute	SAMN00713629	GCA_000214705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/705/GCA_000214705.1_ASM21470v1	-	DSM 6115
Prochlorothrix hollandica PCC 9006 = CALU 1027	317619	PRJNA63021	63021	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.52547	54.5	-	AJTX02	10	4294	3737	2/20/13	11/1/16	Contig	"Department of Microbiology, Saint-Petersrurg State University"	SAMN02470873	GCA_000341585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/585/GCA_000341585.2_ASM34158v2	-	-
Acinetobacter parvus NIPH 1103	1217671	PRJNA183327	183327	Proteobacteria	Gammaproteobacteria	3.01896	41.7	-	APOL01	12	2962	2690	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01828187	GCA_000368005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/005/GCA_000368005.1_Acin_parv_NIPH_1103_V1	-	NIPH 1103
Acinetobacter bereziniae LMG 1003 = CIP 70.12	981324	PRJNA183276	183276	Proteobacteria	Gammaproteobacteria	5.02653	38.3	-	APQG01	3	4760	4552	4/16/13	4/10/17	Scaffold	Broad Institute	SAMN01087834	GCA_000368925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/925/GCA_000368925.1_Acin_bere_CIP_70_12_V1	-	CIP 70.12
Saccharomonospora azurea SZMC 14600	1114959	PRJNA76787	76787	Terrabacteria group	Actinobacteria	4.97373	70.3	-	AHBX01	216	4609	4231	12/8/11	5/19/17	Contig	BAYGEN	SAMN02469318	GCA_000236985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/985/GCA_000236985.2_ASM23698v2	-	SZMC 14600
Barnesiella viscericola	397865	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.63606	53.1	-	DCET01	58	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452973	GCA_002314965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/965/GCA_002314965.1_ASM231496v1	28894102	-
Sulfurimonas gotlandica GD1	929558	PRJNA19295	19295	Proteobacteria	delta/epsilon subdivisions	2.94631	33.6	-	ABXD01	12	2887	2801	9/24/08	4/7/17	Scaffold	Moore Foundation	SAMN02436272	GCA_000156095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/095/GCA_000156095.1_ASM15609v1	-	GD 1
Propionimicrobium lymphophilum ACS-093-V-SCH5	883161	PRJNA52123	52123	Terrabacteria group	Actinobacteria	2.26677	55.9	-	AGZR01	1	2098	2000	6/13/13	4/8/17	Scaffold	Broad Institute	SAMN02596778	GCA_000411175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/175/GCA_000411175.1_Prop_lymp_ACS-093-V-SCH5_V1	-	ACS-093-V-SCH5
Facklamia hominis ACS-120-V-Sch10	883110	PRJNA52113	52113	Terrabacteria group	Firmicutes	1.95107	38.9	-	AGZC01	4	1813	1703	6/21/13	4/8/17	Scaffold	Broad Institute	SAMN02596775	GCA_000413455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/455/GCA_000413455.1_Fack_homi_ACS-120-V-SCH10_V1	-	ACS-120-V-Sch10
Photorhabdus temperata J3	1389415	PRJNA215811	215811	Proteobacteria	Gammaproteobacteria	5.6618	43.7	-	AXDT01	783	4917	4213	10/22/13	4/9/17	Contig	Kyungpook National University	SAMN02470225	GCA_000478765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/765/GCA_000478765.1_PtemJ3_1.0	-	J3
Campylobacter ureolyticus DSM 20703	1121102	PRJNA174981	174981	Proteobacteria	delta/epsilon subdivisions	1.74059	28.9	-	ARGD01	35	1784	1685	4/19/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440444	GCA_000374605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/605/GCA_000374605.1_ASM37460v1	-	DSM 20703
Methanocella paludicola SANAE	304371	PRJDA20361	20361	Euryarchaeota	Methanomicrobia	2.95763	54.9	chromosome:AP011532.1	-	1	3062	3004	12/26/09	10/7/16	Complete Genome	NITE	SAMD00060931	GCA_000011005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/005/GCA_000011005.1_ASM1100v1	-	SANAE
Corynebacterium stationis	1705	PRJNA242207	242207	Terrabacteria group	Actinobacteria	2.86223	54.8785	chromosome:NZ_CP009251.1/CP009251.1; plasmid pCstat1:NZ_CP009252.1/CP009252.1	-	2	2640	2491	1/10/17	4/16/17	Complete Genome	Bielefeld University	SAMN02996501	GCA_001941345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/345/GCA_001941345.1_ASM194134v1	-	622=DSM 20302
Anaerotignum propionicum DSM 1682	991789	PRJEB18154	355463	Terrabacteria group	Firmicutes	3.07669	38.9	-	FQUA01	28	2944	2827	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745151	GCA_900129165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/165/GCA_900129165.1_IMG-taxon_2582581271_annotated_assembly	-	DSM 1682
Clostridium colicanis 209318	999411	PRJNA64873	64873	Terrabacteria group	Firmicutes	3.50562	26.5	-	AGYT01	10	3271	3146	4/19/13	4/8/17	Scaffold	Broad Institute	SAMN02596770	GCA_000371465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/465/GCA_000371465.1_Clos_coli_209318_V1	-	209318
Burkholderia seminalis	488731	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.55022	67.4	-	LOWU01	55	7006	6684	1/21/16	4/11/17	Contig	Northern Arizona University	SAMN03449244	GCA_001524085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/085/GCA_001524085.1_ASM152408v1	-	FL-5-5-10-S1-D0
Vibrio ordalii FF-167	617131	PRJNA164835	164835	Proteobacteria	Gammaproteobacteria	3.78066	44.8	-	AJYR02	285	3423	3158	8/13/12	4/13/17	Scaffold	MIT	SAMN02470476	GCA_000287075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/075/GCA_000287075.2_ASM28707v2	22955834	FF-167
Rhizobium mesoamericanum STM6155	796891	PRJNA163057	163057	Proteobacteria	Alphaproteobacteria	6.92791	58.9	-	ATYY01	147	6831	6279	7/15/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440600	GCA_000427925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/925/GCA_000427925.1_ASM42792v1	-	STM 6155
Streptomyces viridosporus	67581	PRJNA293375	293375	Terrabacteria group	Actinobacteria	8.09722	72.3	-	MSGP01	986	7577	6581	4/3/17	4/5/17	Scaffold	USDA/ARS/NCAUR	SAMN06173285	GCA_002078235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/235/GCA_002078235.1_ASM207823v1	-	NRRL 2414
Thermus oshimai DSM 12092	1123390	PRJNA169715	169715	Terrabacteria group	Deinococcus-Thermus	2.26095	68.7	-	ARDI01	24	2406	2298	4/19/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441370	GCA_000373145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/145/GCA_000373145.1_ASM37314v1	-	DSM 12092
Lactobacillus gastricus PS3	1144300	PRJNA82791	82791	Terrabacteria group	Firmicutes	1.90487	41.8	-	AICN01	80	1964	1839	2/16/12	4/7/17	Contig	Era7 Bioinformatics	SAMN02471359	GCA_000247775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/775/GCA_000247775.2_ASM24777v2	23846278	PS3
Marinovum algicola	42444	PRJEB19725	384761	Proteobacteria	Alphaproteobacteria	5.30459	65	-	FWFM01	63	5113	4967	4/28/17	5/6/17	Contig	UVEG	SAMEA102060418	GCA_900172245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/245/GCA_900172245.1_M.algicola_CECT5396_Spades_Prokka	-	CECT 5396
Amycolatopsis methanolica 239	1068978	PRJNA82743	82743	Terrabacteria group	Actinobacteria	7.19686	71.5	-	AQUL01	2	7142	6486	4/19/13	5/18/17	Contig	JGI	SAMN02261309	GCA_000371885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/885/GCA_000371885.1_ASM37188v1	-	239
Enterobacter cloacae	550	PRJNA383436	383436	Proteobacteria	Gammaproteobacteria	5.26712	54.8685	chromosome:NZ_CP022532.1/CP022532.1; plasmid pMS7884A:NZ_CP022533.1/CP022533.1; plasmid pMS7884B:NZ_CP022534.1/CP022534.1	-	3	5243	4971	7/31/17	8/3/17	Complete Genome	University of Queensland	SAMN06765483	GCA_002237465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/465/GCA_002237465.1_ASM223746v1	-	MS7884A
Methanocaldococcus villosus KIN24-T80	1069083	PRJNA194097	194097	Euryarchaeota	Methanococci	1.20736	29.4	-	APMM01	81	1371	1213	4/11/13	4/8/17	Contig	King Abdullah University of Science and Technology	SAMN02470129	GCA_000363885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/885/GCA_000363885.1_MethanoVillo1.0	23846275	KIN24-T80
Enterococcus sulfureus ATCC 49903	1140003	PRJNA82543	82543	Terrabacteria group	Firmicutes	2.30646	38	-	AHYX01	9	2254	2157	5/31/13	4/8/17	Scaffold	Broad Institute	SAMN02596964	GCA_000407025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/025/GCA_000407025.1_Ente_sulf_ATCC49903_V1	-	ATCC 49903
Bacillus azotoformans MEV2011	1348973	PRJNA209301	209301	Terrabacteria group	Firmicutes	4.70389	37.5	-	JJRY01	56	4796	4423	6/16/14	4/9/17	Contig	Aarhus University	SAMN02726830	GCA_000708505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/505/GCA_000708505.1_BacMEV2011_1.0	25685261	MEV2011
Enterococcus columbae DSM 7374 = ATCC 51263	1121865	PRJNA169706	169706	Terrabacteria group	Firmicutes	2.50673	36.3	-	ARDE01	40	2389	2281	4/19/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441041	GCA_000373065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/065/GCA_000373065.1_ASM37306v1	-	DSM 7374
Enterococcus avium ATCC 14025	1140002	PRJNA191888	191888	Terrabacteria group	Firmicutes	4.61428	39	-	ASWL01	12	4534	4414	5/31/13	4/10/17	Scaffold	Broad Institute	SAMN02596897	GCA_000407245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/245/GCA_000407245.1_Ente_aviu_ATCC14025_V2	-	ATCC 14025
Sphingomonas melonis DAPP-PG 224	1090320	PRJNA86073	86073	Proteobacteria	Alphaproteobacteria	4.09621	67	-	AQZT01	4	3887	3770	4/22/13	4/8/17	Scaffold	JGI	SAMN02261316	GCA_000379045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/045/GCA_000379045.1_ASM37904v1	-	DAPP-PG 224
Enterococcus cecorum DSM 20682 = ATCC 43198	1121864	PRJNA165387	165387	Terrabacteria group	Firmicutes	2.34085	36.4	-	ARBO01	47	2422	2271	4/22/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02256445	GCA_000379745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/745/GCA_000379745.1_ASM37974v1	-	DSM 20682
Enterococcus dispar ATCC 51266	1139219	PRJNA191887	191887	Terrabacteria group	Firmicutes	2.81292	37.2	-	ASWK01	4	2706	2601	5/31/13	4/8/17	Contig	Broad Institute	SAMN02596962	GCA_000407585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/585/GCA_000407585.1_Ente_disp_ATCC51266_V2	-	ATCC 51266
Klebsiella aerogenes	548	PRJNA279469	279469	Proteobacteria	Gammaproteobacteria	5.62643	54.8443	chromosome:NZ_CP011539.1/CP011539.1; plasmid pGPN1:NZ_CP011540.1/CP011540.1	-	2	5681	5388	2/24/16	9/25/17	Complete Genome	IMI Translocation	SAMN03448049	GCA_001571545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/545/GCA_001571545.2_ASM157154v2	26398358	G7
Lactobacillus kisonensis DSM 19906 = JCM 15041	1423766	PRJNA222257	222257	Terrabacteria group	Firmicutes	3.00622	41.7	-	AZEB01	122	2817	2689	11/6/15	4/11/17	Contig	Shanghai Majorbio	SAMN02369458	GCA_001434135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/135/GCA_001434135.1_ASM143413v1	26415554	DSM 19906
Rubrivivax gelatinosus CBS	1154769	PRJNA85569	85569	Proteobacteria	Betaproteobacteria	5.01088	70.7	-	AJFF01	1219	5020	4048	3/30/12	5/19/17	Contig	Michigan State University	SAMN02470550	GCA_000257145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/145/GCA_000257145.1_ASM25714v1	22628496	CBS
Thermococcus litoralis	2265	PRJEB12806	343370	Euryarchaeota	Thermococci	2.16848	43.2	-	FJMQ01	207	2346	2170	9/18/16	5/31/17	Contig	NTNU	SAMEA3878241	GCA_900064395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/395/GCA_900064395.1_ASM90006439v1	-	-
Vibrio cyclitrophicus ZF255	1136174	PRJNA81893	81893	Proteobacteria	Gammaproteobacteria	4.96859	43.6	-	AIDP01	126	4426	4273	3/26/12	5/19/17	Scaffold	Massachusetts Institute of Technology	SAMN02470483	GCA_000256425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/425/GCA_000256425.1_Vibcyclo-ZF-255_1.0	22491847	ZF255
Enterobacter hormaechei subsp. hormaechei	301105	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.06373	54.8409	chromosome:NZ_CP010377.1/CP010377.1; plasmid p34983-328.905kb:NZ_CP010380.1/CP010380.1; plasmid p34983-43.621kb:NZ_CP010379.1/CP010379.1; plasmid p34983-59.134kb:NZ_CP010378.1/CP010378.1	-	4	4989	4713	1/5/15	3/25/17	Complete Genome	JCVI	SAMN03067416	GCA_000814205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/205/GCA_000814205.1_ASM81420v1	-	34983
Enterobacter cloacae	550	PRJNA341281	341281	Proteobacteria	Gammaproteobacteria	5.0875	54.827	chromosome complete genome:NZ_CP017475.1/CP017475.1; plasmid pM12X01451:NZ_CP017473.1/CP017473.1	-	2	4950	4667	8/1/17	9/16/17	Complete Genome	USDA	SAMN05831100	GCA_002303275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/275/GCA_002303275.1_ASM230327v1	-	M12X01451
Lactobacillus vini DSM 20605	1133569	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.23803	37.5	-	AYYX01	269	2184	2049	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369481	GCA_001435395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/395/GCA_001435395.1_ASM143539v1	26415554	DSM 20605
Streptococcus macedonicus	59310	PRJNA248124	248124	Terrabacteria group	Firmicutes	2.22386	37.4	-	JNCV01	74	2296	1938	6/19/14	4/9/17	Scaffold	University of Padova	SAMN02786859	GCA_000710665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/665/GCA_000710665.1_ASM71066v1	25103758	33MO
Basilea psittacipulmonis DSM 24701	1072685	PRJNA71177	71177	Proteobacteria	Betaproteobacteria	1.86761	40.2	-	AFWK01	118	1665	1568	2/17/17	4/17/17	Contig	"Genomic Research Lab, Hopital Universitaire Geneve"	SAMN06345902	GCA_002003525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/003/525/GCA_002003525.1_ASM200352v1	24581117	DSM 24701
Gordonia terrae NBRC 100016	1089454	PRJDA73365	73365	Terrabacteria group	Actinobacteria	5.66915	67.8	-	BAFD01	130	5132	4909	2/17/12	5/18/17	Contig	National Institute of Technology and Evaluation	SAMD00041763	GCA_000248035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/035/GCA_000248035.2_ASM24803v2	-	NBRC 100016
Megasphaera elsdenii DSM 20460	1064535	PRJEA70535	70535	Terrabacteria group	Firmicutes	2.47472	52.8	chromosome:NC_015873.1/HE576794.1	-	1	2314	2177	7/26/11	3/30/17	Chromosome	University of Natural Resources and Life Sciences	SAMEA2272734	GCA_000283495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/495/GCA_000283495.2_ASM28349v2	21914887	DSM 20460
Paenibacillus terrae	159743	PRJNA267726	267726	Terrabacteria group	Firmicutes	6.51486	45.7	-	JTHP01	234	6039	5538	3/4/15	4/10/17	Contig	University of Alberta	SAMN03199809	GCA_000943545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/545/GCA_000943545.1_ASM94354v1	25908148	NRRL B-30644
Thermacetogenium phaeum DSM 12270	1089553	PRJNA80949	80949	Terrabacteria group	Firmicutes	2.92313	53.8	-	JAFF01	3	2888	2736	1/10/14	4/9/17	Scaffold	JGI	SAMN02584910	GCA_000519285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/285/GCA_000519285.1_ASM51928v1	-	DSM 12270
Halococcus hamelinensis 100A6	1132509	PRJNA80845	80845	Euryarchaeota	Halobacteria	3.38368	65.5	-	AJRK01	453	3495	3211	4/18/12	3/15/17	Contig	School of Biotechnology and Biomolecular Sciences 	SAMN02470884	GCA_000259215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/215/GCA_000259215.1_ASM25921v1	22461544	100A6
Bacillus vireti LMG 21834	1131730	PRJNA80825	80825	Terrabacteria group	Firmicutes	5.28373	39.7	-	ALAN01	226	5110	4950	12/16/13	4/11/17	Contig	University of Ghent	SAMN02471784	GCA_000508325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/325/GCA_000508325.2_BAVI_1	24708037	LMG 21834
Candidatus Photodesmus katoptron	28176	PRJNA239710	239710	Proteobacteria	Gammaproteobacteria	1.00016	30.8	-	JGVJ01	18	918	864	7/18/14	4/9/17	Contig	University of Michigan	SAMN02666846	GCA_000731785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/785/GCA_000731785.1_ASM73178v1	-	Akat8
Advenella kashmirensis W13003	1424334	PRJNA228954	228954	Proteobacteria	Betaproteobacteria	4.84603	55.1	-	AYXT01	12	4478	4405	12/12/13	4/9/17	Scaffold	Tianjin University	SAMN02404614	GCA_000506985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/985/GCA_000506985.1_Advkasv1.0	24482505	W13003
Enterobacter cloacae ECNIH2	1333850	PRJNA202893	202893	Proteobacteria	Gammaproteobacteria	5.50268	54.8216	chromosome:NZ_CP008823.1/CP008823.1; plasmid pKEC-39c:NZ_CP008824.1/CP008824.1; plasmid pKPC-272:NZ_CP008825.1/CP008825.1; plasmid pKPC-f91:NZ_CP008826.1/CP008826.1	-	4	5494	5171	7/9/14	3/24/17	Complete Genome	NISC	SAMN02713682	GCA_000724505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/505/GCA_000724505.1_ASM72450v1	-	ECNIH2
Lactobacillus parafarraginis F0439	797515	PRJNA49691	49691	Terrabacteria group	Firmicutes	2.85491	45.6	-	AGEY01	165	2811	2486	12/16/11	4/7/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN02299435	GCA_000238835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/835/GCA_000238835.1_ASM23883v1	-	F0439
Lactobacillus mucosae	97478	PRJNA262170	262170	Terrabacteria group	Firmicutes	2.2577	46.6	-	JROC01	38	2368	1699	10/14/14	4/2/17	Contig	Centro de Referencia para Lactobacilos (CERELA-CONICET)	SAMN03081593	GCA_000766905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/766/905/GCA_000766905.1_ASM76690v1	25502678	CRL573
Corynebacterium stationis	1705	PRJNA374529	374529	Terrabacteria group	Actinobacteria	2.87116	54.8	chromosome:NZ_CP019963.1/CP019963.1	-	1	2671	2501	3/9/17	3/11/17	Complete Genome	Kyungpook National University	SAMN06327123	GCA_002024345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/345/GCA_002024345.1_ASM202434v1	-	LMG 21670
Candidatus Desulfovibrio trichonymphae	1725232	PRJDB4249	353269	Proteobacteria	delta/epsilon subdivisions	1.41006	54.8	chromosome:AP017368.1	-	1	1327	1082	11/9/16	6/15/17	Complete Genome	Department of Biological Sciences Graduate School of Bioscience and Biotechnology Tokyo Institute of Technology	SAMD00046548	GCA_002355955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/955/GCA_002355955.1_ASM235595v1	-	Rs-N31
Prevotella saccharolytica F0055	1127699	PRJNA80251	80251	FCB group	Bacteroidetes/Chlorobi group	2.85349	43.1	-	AMEP01	71	2242	2117	12/10/12	4/11/17	Scaffold	Washington University	SAMN02436685	GCA_000318195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/195/GCA_000318195.2_ASM31819v2	-	F0055
Cupriavidus basilensis OR16	1127483	PRJNA79047	79047	Proteobacteria	Betaproteobacteria	8.54622	65.4	-	AHJE01	416	7889	6571	1/19/12	5/18/17	Contig	BAYGEN	SAMN02469316	GCA_000243095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/095/GCA_000243095.2_ASM24309v2	22461549	OR16
Cloacibacillus porcorum	1197717	PRJNA335387	335387	Synergistetes	Synergistia	3.58519	54.8	chromosome:NZ_CP016757.1/CP016757.1	-	1	3226	3123	8/9/16	4/17/17	Complete Genome	USDA	SAMN05441363	GCA_001701045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/045/GCA_001701045.1_ASM170104v1	-	CL-84
Nocardia cyriacigeorgica NBRC 100375	1206728	PRJDB124	170631	Terrabacteria group	Actinobacteria	6.31131	68.2	-	BAFY01	328	5840	5405	7/13/12	5/19/17	Contig	National Institute of Technology and Evaluation	SAMD00041775	GCA_000308555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/555/GCA_000308555.1_ASM30855v1	-	NBRC 100375
Weissella confusa LBAE C39-2	1127131	PRJEA78999	78999	Terrabacteria group	Firmicutes	2.28402	44.8	-	CAGH01	71	2186	2052	12/21/11	4/7/17	Contig	LISBP	SAMEA2272020	GCA_000239955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/955/GCA_000239955.2_ASM23995v2	-	LBAE C39-2
Pseudomonas oleovorans	301	PRJNA251508	251508	Proteobacteria	Gammaproteobacteria	5.20159	64.9	-	JNHE01	105	4907	4766	7/21/14	4/9/17	Contig	85303	SAMN02834833	GCA_000732445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/445/GCA_000732445.1_ASM73244v1	-	MGY01
Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536	1125725	PRJNA78911	78911	Spirochaetes	Spirochaetia	2.80463	49.4	-	AUZJ01	74	2628	2484	9/4/13	4/8/17	Contig	J. Craig Venter Institute	SAMN00792340	GCA_000464455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/455/GCA_000464455.1_TrepsocrDR56BR1116v1.0	-	VPI DR56BR1116
Rothia aeria F0184	888019	PRJNA52997	52997	Terrabacteria group	Actinobacteria	2.60319	56.6	-	AXZG01	32	2293	2155	10/23/13	4/9/17	Scaffold	Washington University	SAMN02436738	GCA_000479025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/025/GCA_000479025.1_ASM47902v1	-	F0184
Actinomyces massiliensis F0489	1125718	PRJNA78897	78897	Terrabacteria group	Actinobacteria	3.41644	67.7	-	AKFT01	233	2956	2766	7/10/12	4/7/17	Contig	J. Craig Venter Institute	SAMN00792233	GCA_000296275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/275/GCA_000296275.1_AmassiliensisF0489v1.0	-	F0489
Actinomyces georgiae F0490	1125717	PRJNA78895	78895	Terrabacteria group	Actinobacteria	2.47736	69.8	-	AKFS01	306	2245	2046	7/10/12	4/7/17	Contig	J. Craig Venter Institute	SAMN00792232	GCA_000277685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/685/GCA_000277685.1_AgeorgiaeF0490v1.0	-	F0490
Arthrobacter globiformis	1665	PRJNA377936	377936	Terrabacteria group	Actinobacteria	4.629	66.1	-	MYFE01	776	4638	3870	6/9/17	6/12/17	Contig	Qingdao Agriculture University	SAMN06477806	GCA_002189495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/495/GCA_002189495.1_ASM218949v1	-	2PR
Prevotella baroniae F0067	1115809	PRJNA78601	78601	FCB group	Bacteroidetes/Chlorobi group	3.02434	53.3	-	AWEY01	44	2433	2322	9/18/13	4/9/17	Contig	J. Craig Venter Institute	SAMN00828753	GCA_000468635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/635/GCA_000468635.1_PbaroF0067v1.0	-	F0067
Novosphingobium pentaromativorans US6-1	1088721	PRJNA73345	73345	Proteobacteria	Alphaproteobacteria	5.34497	63.0498	plasmid pLA1:NZ_AGFM01000122.1/AGFM01000122.1; plasmid pLA2:NZ_AGFM01000123.1/AGFM01000123.1	AGFM01	123	5061	4839	11/21/11	5/19/17	Contig	Korea Ocean Research & Development Institute	SAMN02470157	GCA_000235975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/975/GCA_000235975.2_ASM23597v1	22275104	US6-1
Sedimentitalea nanhaiensis	999627	PRJEB17570	352003	Proteobacteria	Alphaproteobacteria	4.89015	60.8	-	FPAW01	90	4807	4557	11/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216236	GCA_900116455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/455/GCA_900116455.1_IMG-taxon_2667527411_annotated_assembly	-	CGMCC 1.10959
Planktothrix agardhii NIVA-CYA 15	329553	PRJNA212885	212885	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.48589	39.6	-	AVFS01	3	4830	4520	9/6/13	4/9/17	Scaffold	University of Oslo	SAMN02261499	GCA_000464665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/665/GCA_000464665.1_NC15_1	23995927	NIVA-CYA 15
Enterobacter sp. ODB01	1827481	PRJNA317796	317796	Proteobacteria	Gammaproteobacteria	4.53404	54.8	chromosome:NZ_CP015227.1/CP015227.1	-	1	4381	4151	4/19/16	4/12/17	Complete Genome	Hunan Agricultural University	SAMN04624399	GCA_001623605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/605/GCA_001623605.1_ASM162360v1	-	ODB01
Citrobacter farmeri GTC 1319	1114922	PRJDB12	77959	Proteobacteria	Gammaproteobacteria	4.9295	53.4	-	BBMX01	31	4802	4597	9/25/14	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00018686	GCA_000764735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/735/GCA_000764735.1_ASM76473v1	-	GTC 1319
Corynebacterium stationis	1705	PRJNA310025	310025	Terrabacteria group	Actinobacteria	2.85367	54.8	chromosome:NZ_CP014279.1/CP014279.1	-	1	2655	2491	2/16/16	4/11/17	Complete Genome	Shanghai Institutes for Biological Sciences (SIBS) of Chinese Academy of Sciences (CAS)	SAMN04445726	GCA_001561975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/975/GCA_001561975.1_ASM156197v1	-	ATCC 6872
Pseudomonas extremaustralis 14-3 substr. 14-3b	1117958	PRJNA77729	77729	Proteobacteria	Gammaproteobacteria	6.58624	60.7	-	AHIP01	135	6140	5919	1/10/12	5/19/17	Contig	INDEAR	SAMN02469910	GCA_000242115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/115/GCA_000242115.2_Pext14-3B_1.0	22493195	14-3 substr. 14-3b
Pseudoalteromonas rubra DSM 6842	1117318	PRJNA77685	77685	Proteobacteria	Gammaproteobacteria	5.9545	47.8	-	AHCD02	194	5038	4837	12/15/11	4/9/17	Contig	Shandong University	SAMN02470921	GCA_000238295.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/295/GCA_000238295.3_Prub_2.0	22374963	ATCC 29570
Pseudoalteromonas piscicida	43662	PRJNA77683	77683	Proteobacteria	Gammaproteobacteria	5.48828	43.2975	chromosome I:NZ_CP011924.1/CP011924.1; chromosome II:NZ_CP011925.1/CP011925.1	-	2	4945	4575	9/18/17	9/20/17	Chromosome	Shandong University	SAMN02470929	GCA_000238315.4	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/315/GCA_000238315.4_ASM23831v4	-	JCM 20779
Candidatus Parvarchaeum acidophilus ARMAN-5_'5-way FS'	994838	PRJNA63557	63557	DPANN group	Candidatus Parvarchaeota	0.100212	33.5	-	AEYO01	5	124	124	3/10/11	8/12/14	Scaffold	University of California Berkeley	SAMN02954274	GCA_000192615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/615/GCA_000192615.1_ASM19261v1	-	-
Cedecea neteri	158822	PRJNA260882	260882	Proteobacteria	Gammaproteobacteria	4.65931	54.8	chromosome:NZ_CP009459.1/CP009459.1	-	1	4418	4222	9/26/14	4/9/17	Complete Genome	University of Malaya	SAMN03066974	GCA_000758325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/325/GCA_000758325.1_ASM75832v1	-	ND14a
Simiduia agarivorans SA1 = DSM 21679	1117647	PRJNA185368	185368	Proteobacteria	Gammaproteobacteria	4.27443	55.9	-	ATUQ01	29	3834	3758	7/9/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440904	GCA_000420285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/285/GCA_000420285.1_ASM42028v1	-	DSM 21679
Streptomyces acidiscabies	42234	PRJNA255692	255692	Terrabacteria group	Actinobacteria	9.97836	70.7	-	JPPY01	47	8902	8379	7/30/15	3/11/17	Scaffold	University of Exeter	SAMN02927998	GCA_001189015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/015/GCA_001189015.1_ASM118901v1	-	NCPPB 4445
Thermococcus nautili	195522	PRJNA237737	237737	Euryarchaeota	Thermococci	1.97636	54.8	chromosome:NZ_CP007264.1/CP007264.1	-	1	2206	2132	3/5/14	4/17/17	Complete Genome	Institute de Genetique et Microbiologie	SAMN03081537	GCA_000585495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/495/GCA_000585495.1_ASM58549v1	-	30-1
Wolbachia pipientis wAlbB	1116230	PRJEA76855	76855	Proteobacteria	Alphaproteobacteria	1.16243	33.8	-	CAGB01	156	1110	955	12/14/11	3/30/17	Contig	CEA/IG-Genoscope	SAMEA2272221	GCA_000242415.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/415/GCA_000242415.3_ASM24241v3	-	wAlbB
Lactobacillus rossiae DSM 15814	1114972	PRJNA165045	165045	Terrabacteria group	Firmicutes	2.95846	43.6	-	AKZK01	233	2744	2646	7/16/12	4/7/17	Scaffold	Department of Biologia e Università di Bari-Dipartimenti Chimica Agro-Forestale ed Ambientale	SAMN02471396	GCA_000277855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/855/GCA_000277855.1_LactoDSM15814_V1	22965087	DSM 15814
Janthinobacterium lividum PAMC 25724	1112211	PRJNA76625	76625	Proteobacteria	Betaproteobacteria	4.98496	60.6	-	AHHB01	48	4428	4152	1/17/12	5/18/17	Contig	korea Polar Research Institute	SAMN02470164	GCA_000242815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/815/GCA_000242815.2_ASM24281v2	22461541	PAMC 25724
Gordonia polyisoprenivorans NBRC 16320 = JCM 10675	1077976	PRJDA71853	71853	Terrabacteria group	Actinobacteria	6.28548	66.9	-	BAEI01	113	5600	5410	12/2/11	5/18/17	Contig	National Institute of Technology and Evaluation	SAMD00041829	GCA_000241325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/325/GCA_000241325.2_ASM24132v2	-	NBRC 16320
Rhodoferax antarcticus ANT.BR	1111071	PRJNA350831	350831	Proteobacteria	Betaproteobacteria	4.00723	58.6	-	MSYM01	20	3922	3669	1/6/17	4/16/17	Contig	Indiana Wesleyan University	SAMN05907728	GCA_001938565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/565/GCA_001938565.1_ASM193856v1	28230808	ANT.BR
Tistrella mobilis	171437	PRJNA305774	305774	Proteobacteria	Alphaproteobacteria	6.23778	68.4	-	LPZR01	233	5569	5313	3/28/16	4/12/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN04332635	GCA_001601315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/315/GCA_001601315.1_ASM160131v1	-	MCCC 1A02139
Rhodococcus rhodochrous BKS6-46	1114961	PRJNA76791	76791	Terrabacteria group	Actinobacteria	6.21364	67.4	-	AGVW02	609	5655	5361	12/20/11	5/19/17	Contig	"Institute of Microbial Technology(IMTECH),Chandigarh,India"	SAMN02470012	GCA_000239135.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/135/GCA_000239135.3_ASM23913v3	-	BKS6-46
Pseudomonas psychrotolerans L19	1112217	PRJNA76561	76561	Proteobacteria	Gammaproteobacteria	5.10024	65.7	-	AHBD01	53	4756	4633	12/5/11	5/19/17	Contig	"Soil, Water and Environmental Science, University of Arizona"	SAMN02471562	GCA_000236825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/825/GCA_000236825.2_ASM23682v2	22374955	L19
Methanosaeta harundinacea	301375	PRJNA278302	278302	Euryarchaeota	Methanomicrobia	2.25909	56.7	-	LGHB01	67	2265	2265	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445182	GCA_001508615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/615/GCA_001508615.1_ASM150861v1	26787827	-
Thermoanaerobacterium saccharolyticum	28896	PRJDB2968	259442	Terrabacteria group	Firmicutes	2.83321	34.8	-	BBKT01	101	2905	2386	8/23/14	4/10/17	Contig	Lab. of Aqua. Mol. Biol. and Biotech.	SAMD00018622	GCA_000747665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/665/GCA_000747665.1_ASM74766v1	-	NTOU1
Corynebacterium casei UCMA 3821	1110505	PRJEA76363	76363	Terrabacteria group	Actinobacteria	3.11274	55.3	-	CAFW01	106	2931	2701	11/8/11	4/7/17	Contig	Institut National de la Recherche Agronomique (INRA)	SAMEA2272663	GCA_000234765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/765/GCA_000234765.2_ASM23476v1	-	UCMA 3821
Bartonella bovis m02	1094492	PRJNA73947	73947	Proteobacteria	Alphaproteobacteria	1.62394	37.4	-	AGWB01	3	1441	1288	4/10/13	4/8/17	Scaffold	Uppsala University	SAMN02472034	GCA_000385395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/395/GCA_000385395.1_m02McIrM01	23555299	m02
Bartonella taylorii	33046	PRJNA360985	360985	Proteobacteria	Alphaproteobacteria	1.67773	38.8	-	MUYW01	194	1461	1326	3/7/17	4/26/17	Scaffold	University of Basel	SAMN06213877	GCA_002022465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/465/GCA_002022465.1_ASM202246v1	28338931	IBS325
Bartonella tamiae Th239	1094558	PRJNA75195	75195	Proteobacteria	Alphaproteobacteria	2.26079	38	-	AIMB01	3	2047	1981	7/13/12	4/7/17	Scaffold	Broad Institute	SAMN02596906	GCA_000278275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/275/GCA_000278275.1_Bart_tami_Th239_V1	-	Th239
Bartonella birtlesii LL-WM9	1094552	PRJNA75197	75197	Proteobacteria	Alphaproteobacteria	1.92293	38.1	-	AIMC01	5	1678	1532	7/13/12	4/7/17	Scaffold	Broad Institute	SAMN02596907	GCA_000278095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/095/GCA_000278095.1_Bart_birt_LL-WM9_V1	-	LL-WM9
Bartonella vinsonii subsp. arupensis OK-94-513	1094562	PRJNA75191	75191	Proteobacteria	Alphaproteobacteria	1.78651	38.8	-	AILZ01	6	1550	1444	7/13/12	4/7/17	Scaffold	Broad Institute	SAMN02596904	GCA_000278235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/235/GCA_000278235.1_Bart_vins_OK-94-513_V1	-	OK-94-513
Bartonella rattimassiliensis 15908	1094556	PRJEB365	172833	Proteobacteria	Alphaproteobacteria	2.00819	36.8	-	CALY02	93	1756	1547	8/24/12	4/8/17	Contig	URMITE	SAMEA2271918	GCA_000312605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/605/GCA_000312605.2_ASM31260v2	23209253	15908
Bartonella doshiae NCTC 12862 = ATCC 700133	1094553	PRJNA223081	223081	Proteobacteria	Alphaproteobacteria	1.76505	37.9	-	JAGY01	39	1590	1456	1/14/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02585002	GCA_000526895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/895/GCA_000526895.1_ASM52689v1	-	ATCC 700133
Bartonella elizabethae F9251 = ATCC 49927	1094555	PRJNA75203	75203	Proteobacteria	Alphaproteobacteria	1.97856	38.5	-	AIMF01	4	1752	1625	7/13/12	4/7/17	Scaffold	Broad Institute	SAMN02596910	GCA_000278315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/315/GCA_000278315.1_Bart_eliz_F9251_V1	-	F9251
Bartonella washoensis 085-0475	1094564	PRJNA75187	75187	Proteobacteria	Alphaproteobacteria	1.95656	39	-	AILX01	13	1765	1564	7/13/12	4/7/17	Scaffold	Broad Institute	SAMN02596902	GCA_000278195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/195/GCA_000278195.1_Bart_wash_085-0475_V1	-	085-0475
Haemophilus paraphrohaemolyticus	736	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.05759	40.8	-	MUXX01	29	2063	1941	3/3/17	3/6/17	Scaffold	TAILORED-Treatment project	SAMN06308708	GCA_002015045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/045/GCA_002015045.1_ASM201504v1	-	CCUG 3718
Thermococcus sp. AM4	246969	PRJNA19381	19381	Euryarchaeota	Thermococci	2.08643	54.8	chromosome:NC_016051.1/CP002952.1	-	1	2302	2231	9/8/11	4/17/17	Complete Genome	Moore Foundation	SAMN02603626	GCA_000151205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/151/205/GCA_000151205.2_ASM15120v2	22123768	AM4
Rickettsia australis str. Phillips	1196662	PRJNA167984	167984	Proteobacteria	Alphaproteobacteria	1.32057	32.2302	plasmid pRau01:NZ_AKVZ01000059.1/AKVZ01000059.1	AKVZ01	59	1487	1158	6/27/12	4/7/17	Contig	"CNRS UMR 6236, Faculté de médecine, Université de la Méditerranée"	SAMN02469769	GCA_000273745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/745/GCA_000273745.1_Rau1.0	22933759	Phillips
Rickettsia parkeri str. AT#24	1359202	PRJNA212479	212479	Proteobacteria	Alphaproteobacteria	1.30053	32.4	-	LAOL01	1	1550	1270	3/27/15	4/10/17	Contig	IGS	SAMN02666644	GCA_000965075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/075/GCA_000965075.1_ASM96507v1	-	AT#24
Leptospira inadai serovar Lyme	293084	PRJNA336349	336349	Spirochaetes	Spirochaetia	4.46443	44.6	-	MCRM01	55	4224	4039	8/12/16	4/13/17	Contig	School of Veterinary Medicine and Animal Science / University of Sao Paulo	SAMN05509393	GCA_001704175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/175/GCA_001704175.1_ASM170417v1	-	M34/99
Endozoicomonas elysicola DSM 22380	1121862	PRJNA169813	169813	Proteobacteria	Gammaproteobacteria	5.54567	46.7	-	AREW01	31	4710	4562	4/19/13	5/18/17	Scaffold	DOE Joint Genome Institute	SAMN02440436	GCA_000373945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/945/GCA_000373945.1_ASM37394v1	-	DSM 22380
Xanthomonas arboricola pv. celebensis	454957	PRJNA252657	252657	Proteobacteria	Gammaproteobacteria	4.98021	65.5	-	JPHE01	7	4301	4045	7/11/14	4/2/17	Scaffold	University of Exeter	SAMN02854337	GCA_000724915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/915/GCA_000724915.1_NCPPB1630V1	-	NCPPB 1630
Salinispora pacifica CNS055	1169182	PRJNA175150	175150	Terrabacteria group	Actinobacteria	5.2633	70.1	-	ARGH01	62	4885	4552	4/19/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441701	GCA_000374685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/685/GCA_000374685.1_ASM37468v1	-	CNS055
Leptospira alexanderi	100053	PRJNA257144	257144	Spirochaetes	Spirochaetia	4.0404	40.3	-	JQGS01	341	4035	3588	3/2/17	3/4/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947771	GCA_002009775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/775/GCA_002009775.1_ASM200977v1	-	56650
Fluoribacter dumoffii Tex-KL	1094714	PRJNA73347	73347	Proteobacteria	Gammaproteobacteria	3.76189	39.6198	chromosome:NZ_CM001371.1/CM001371.1; plasmid pLDTK:NZ_CM001372.1/CM001372.1	AGVT01	2	3344	3261	11/23/11	4/7/17	Chromosome	Beijing Genomics Institute	SAMN02469351	GCA_000236145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/145/GCA_000236145.1_ASM23614v1	-	Tex-KL
Leptospira kirschneri serovar Grippotyphosa str. RM52	1049946	PRJNA74049	74049	Spirochaetes	Spirochaetia	4.36501	35.9	-	AHMJ02	28	3952	3602	1/24/12	5/18/17	Contig	J. Craig Venter Institute	SAMN02436368	GCA_000243615.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/615/GCA_000243615.3_gls454044v1.0	-	RM52
Xanthomonas vasicola pv. vasculorum NCPPB 1326	1094174	PRJNA73853	73853	Proteobacteria	Gammaproteobacteria	4.95157	63.2	-	AKBK01	253	4616	3914	7/17/12	6/19/17	Scaffold	University of Exeter	SAMN02471728	GCA_000277995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/995/GCA_000277995.1_Xvv1326v1	24704974	NCPPB 1326
Klebsiella aerogenes KCTC 2190	1028307	PRJNA66537	66537	Proteobacteria	Gammaproteobacteria	5.28035	54.8	chromosome:NC_015663.1/CP002824.1	-	1	5021	4912	6/3/11	8/28/16	Complete Genome	Macrogen Inc.	SAMN02603581	GCA_000215745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/745/GCA_000215745.1_ASM21574v1	22493190	KCTC 2190
Francisella hispaniensis FSC454	1088883	PRJNA257008	257008	Proteobacteria	Gammaproteobacteria	1.89514	32.2	-	LUFR01	95	1870	1725	4/4/16	4/12/17	Contig	µFORGE	SAMN04328139	GCA_001608445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/445/GCA_001608445.1_FHIS001-SEQ-1-ASM-1	-	CCUG 58020
Commensalibacter intestini	479936	PRJNA253128	253128	Proteobacteria	Alphaproteobacteria	2.43498	36.8	-	JOPB01	50	2232	2144	5/19/17	5/24/17	Contig	Cornell University	SAMN02866230	GCA_002153535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/535/GCA_002153535.1_ASM215353v1	-	DmL_052
Paenibacillus peoriae KCTC 3763	1087481	PRJNA73251	73251	Terrabacteria group	Firmicutes	5.77199	46.4	-	AGFX01	49	5179	4905	12/5/11	5/19/17	Scaffold	Korea Research Institute of Bioscience & Biotechnology	SAMN02470185	GCA_000236805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/805/GCA_000236805.2_PPe03	-	KCTC 3763
Advenella kashmirensis WT001	1036672	PRJNA67337	67337	Proteobacteria	Betaproteobacteria	4.42388	54.7927	chromosome:NC_017964.1/CP003555.1; plasmid pWTk445:NC_017965.1/CP003556.1	-	2	4318	3312	5/25/12	5/18/17	Complete Genome	Bose Institute	SAMN01940915	GCA_000219915.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/915/GCA_000219915.3_ASM21991v3	21914874	WT001
Carnobacterium maltaromaticum	2751	PRJNA222257	222257	Terrabacteria group	Firmicutes	3.57615	34.3	-	JQBU01	35	3338	3199	11/6/15	4/4/17	Scaffold	Shanghai Majorbio	SAMN02797806	GCA_001437035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/035/GCA_001437035.1_ASM143703v1	26415554	DSM 20722
Exiguobacterium antarcticum DSM 14480	1397700	PRJNA218049	218049	Terrabacteria group	Firmicutes	3.21948	47.1	-	JMKS01	7	3306	3125	5/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743349	GCA_000685865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/865/GCA_000685865.1_ASM68586v1	25323723	DSM 14480
Geobacter lovleyi SZ	398767	PRJNA17423	17423	Proteobacteria	delta/epsilon subdivisions	3.99487	54.7653	chromosome:NC_010814.1/CP001089.1; plasmid pGLOV01:NC_010815.1/CP001090.1	-	2	3718	3627	6/5/08	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN00623044	GCA_000020385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/385/GCA_000020385.1_ASM2038v1	-	SZ
Mycobacterium mageritense JR2009	1087053	PRJNA73031	73031	Terrabacteria group	Actinobacteria	6.49968	66.4	-	AGSZ01	1031	6667	5842	11/4/11	5/19/17	Contig	University of Oxford	SAMN02471927	GCA_000233935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/935/GCA_000233935.2_Mfort_1.0	-	JR2009
Flavobacterium frigoris PS1	1086011	PRJNA73123	73123	FCB group	Bacteroidetes/Chlorobi group	3.9341	34.4	-	AHKF01	52	3413	3313	3/8/12	4/7/17	Contig	University of Nevada Las Vegas	SAMN02471905	GCA_000252125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/125/GCA_000252125.2_ASM25212v2	24699650	PS1
[Clostridium] clariflavum 4-2a	1045012	PRJNA89155	89155	Terrabacteria group	Firmicutes	4.8724	35.7	-	ASAA01	4	4168	3833	1/10/14	4/9/17	Scaffold	JGI	SAMN02584913	GCA_000519985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/985/GCA_000519985.1_ASM51998v1	26205857	4-2a
Mesorhizobium amorphae CCNWGS0123	1082933	PRJNA72951	72951	Proteobacteria	Alphaproteobacteria	7.29357	62.9	-	AGSN01	274	6982	6547	11/4/11	5/19/17	Contig	Northwest A&F University	SAMN02471575	GCA_000233995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/995/GCA_000233995.2_ASM23399v1	22247533	CCNWGS0123
Prevotella pleuritidis JCM 14110	1236494	PRJDB581	243156	FCB group	Bacteroidetes/Chlorobi group	2.56011	45	-	BAJN01	49	2139	1779	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00012129	GCA_000613725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/725/GCA_000613725.1_ASM61372v1	-	JCM 14110
Leucobacter chromiiresistens	1079994	PRJNA278179	278179	Terrabacteria group	Actinobacteria	2.79422	70.8	-	LDRK01	194	2576	2415	12/22/15	4/11/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401343	GCA_001477055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/055/GCA_001477055.1_ASM147705v1	26793183	NS354
Herbaspirillum rubrisubalbicans Os45	1234777	PRJNA175812	175812	Proteobacteria	Betaproteobacteria	5.63315	61.6	-	AMSA01	144	5117	4973	10/1/12	5/18/17	Contig	Zhejiang University	SAMN02472176	GCA_000300415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/415/GCA_000300415.1_ASM30041v1	23209242	Os45
Enterobacter cloacae ECR091	1333849	PRJNA202892	202892	Proteobacteria	Gammaproteobacteria	4.95989	54.7421	chromosome:NZ_CP008905.1/CP008905.1; plasmid pENT-08e:NZ_CP008906.1/CP008906.1; plasmid pENT-4bd:NZ_CP008907.1/CP008907.1; plasmid pKPC-47e:NZ_CP008908.1/CP008908.1	-	4	4843	4546	9/9/14	4/2/17	Complete Genome	NISC	SAMN02713646	GCA_000750275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/275/GCA_000750275.1_ASM75027v1	-	ECR091
Streptococcus lutetiensis	150055	PRJNA304333	304333	Terrabacteria group	Firmicutes	1.80111	37.7	-	LQOI01	41	1739	1519	3/2/16	4/12/17	Scaffold	University of Kaiserslautern	SAMN04324325	GCA_001578785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/785/GCA_001578785.1_ASM157878v1	27303717	DD06
Bacillus mojavensis RRC 101	1329377	PRJNA200690	200690	Terrabacteria group	Firmicutes	4.03487	43.7	-	ASJT01	116	4227	3884	6/3/13	4/8/17	Contig	USDA-ARS	SAMN02472061	GCA_000404285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/285/GCA_000404285.1_ASM40428v1	-	RRC 101
Bacillus horikoshii	79883	PRJNA318161	318161	Terrabacteria group	Firmicutes	4.26362	41.9	-	LWJI01	3	4313	4156	5/3/16	4/12/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04633521	GCA_001636495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/495/GCA_001636495.1_ASM163649v1	-	FJAT-14233
Paenibacillus barengoltzii J12	935846	PRJEB20431	382938	Terrabacteria group	Firmicutes	4.70261	51.9	-	FXAE01	100	4329	4123	4/19/17	4/22/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02744124	GCA_900177265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/265/GCA_900177265.1_IMG-taxon_2528768208_annotated_assembly	-	J12
Clostridium cadaveris	1529	PRJEB17278	351472	Terrabacteria group	Firmicutes	3.53219	31.1	-	FOOE01	52	3385	3197	11/1/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487885	GCA_900113105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/105/GCA_900113105.1_IMG-taxon_2623620513_annotated_assembly	-	NLAE-zl-G419
Legionella anisa str. Linanisette	1230343	PRJNA174470	174470	Proteobacteria	Gammaproteobacteria	4.31973	38.2	-	CANP01	56	3871	3623	1/15/13	5/18/17	Contig	URMITE	SAMEA3138431	GCA_000333755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/755/GCA_000333755.1_ASM33375v1	"1,113,680,224,503,980"	Linanisette
Halomonas boliviensis LC1	1072583	PRJNA391828	391828	Proteobacteria	Gammaproteobacteria	4.1334	54.7	-	NPEY01	48	3818	3685	8/22/17	8/24/17	Contig	UC Davis	SAMN07276656	GCA_002265845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/845/GCA_002265845.1_ASM226584v1	-	LC1
Bacillus aquimaris	189382	PRJEB6484	251840	Terrabacteria group	Firmicutes	4.42347	44.6	-	CCMN01	51	4459	4268	8/15/14	4/9/17	Contig	URMITE	SAMEA2663724	GCA_000751975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/975/GCA_000751975.1_Bacillus_aquimaris	-	-
Candidatus Paraburkholderia kirkii	198822	PRJNA253356	253356	Proteobacteria	Betaproteobacteria	3.91471	64	-	LFKV01	48	4856	2325	7/30/15	7/30/15	Contig	University of Zurich	SAMN03777306	GCA_001189345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/345/GCA_001189345.1_ASM118934v1	-	UZHbot2
Dolichospermum circinale AWQC131C	398007	PRJNA179122	179122	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.44565	37.4	-	APIY01	121	4124	3779	7/12/13	4/8/17	Scaffold	University of Western Sydney	SAMN02471998	GCA_000426905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/905/GCA_000426905.1_Dcir131C	-	AWQC131C
Janibacter terrae NBRC 107854 = JCM 12887	1053688	PRJNA69541	69541	Terrabacteria group	Actinobacteria	3.29732	71.9	-	BDAR01	25	3246	3132	3/12/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046505	GCA_001598955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/955/GCA_001598955.1_ASM159895v1	-	NBRC 107854
Klebsiella oxytoca	571	PRJNA246471	246471	Proteobacteria	Gammaproteobacteria	6.67312	54.7103	chromosome:NZ_CP011618.1/CP011618.1; plasmid pCAV1335-115:NZ_CP011617.1/CP011617.1; plasmid pCAV1335-118:NZ_CP011616.1/CP011616.1; plasmid pCAV1335-5410:NZ_CP011613.1/CP011613.1; plasmid pCAV1335-92:NZ_CP011614.1/CP011614.1; plasmid pKPC_CAV1335:NZ_CP011615.1/CP011615.1	-	6	6572	6281	6/9/15	2/21/17	Complete Genome	University of Oxford	SAMN03733750	GCA_001022115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/115/GCA_001022115.1_ASM102211v1	-	CAV1335
Klebsiella oxytoca	571	PRJNA246471	246471	Proteobacteria	Gammaproteobacteria	6.58239	54.7077	chromosome:NZ_CP017928.1/CP017928.1; plasmid pCAV1015-111:NZ_CP017931.1/CP017931.1; plasmid pCAV1015-114:NZ_CP017930.1/CP017930.1; plasmid pCAV1015-12:NZ_CP017933.1/CP017933.1; plasmid pCAV1015-76:NZ_CP017932.1/CP017932.1; plasmid pKPC_UVA02:NZ_CP017929.1/CP017929.1	-	6	6466	6185	11/7/16	2/21/17	Complete Genome	University of Oxford	SAMN03733631	GCA_001870185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/185/GCA_001870185.1_ASM187018v1	25561339	CAV1015
Lactobacillus versmoldensis DSM 14857 = KCTC 3814	1423815	PRJDA68089	68089	Terrabacteria group	Firmicutes	2.39805	38.2	-	BACR01	102	2358	2236	6/21/11	4/7/17	Contig	Korea Research Institute of Bioscience and Biotechnology	SAMD00036562	GCA_000260455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/455/GCA_000260455.1_ASM26045v1	21914893	KCTC 3814
Lactobacillus zeae DSM 20178 = KCTC 3804	1423816	PRJDA68087	68087	Terrabacteria group	Firmicutes	3.11033	47.8	-	BACQ01	113	3119	2846	6/21/11	4/7/17	Contig	Korea Research Institute of Bioscience and Biotechnology	SAMD00036561	GCA_000260435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/435/GCA_000260435.1_ASM26043v1	21868802	KCTC 3804
Lactobacillus mali	1618	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.43705	36.5	-	JQAR01	78	2380	2248	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02797767	GCA_001437155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/155/GCA_001437155.1_ASM143715v1	26415554	ATCC 27304
Lactobacillus suebicus DSM 5007 = KCTC 3549	1423807	PRJDA68083	68083	Terrabacteria group	Firmicutes	2.65694	39	-	BACO01	143	2507	2374	6/21/11	4/7/17	Contig	Korea Research Institute of Bioscience and Biotechnology	SAMD00036559	GCA_000260395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/395/GCA_000260395.1_ASM26039v1	21914862	KCTC 3549
Lactobacillus malefermentans DSM 5705 = KCTC 3548	1122149	PRJDA68081	68081	Terrabacteria group	Firmicutes	2.00392	41.1	-	BACN01	172	1982	1893	6/22/11	4/7/17	Contig	Korea Research Institute of Bioscience and Biotechnology	SAMD00036558	GCA_000260775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/775/GCA_000260775.1_ASM26077v1	21914865	KCTC 3548
Leuconostoc carnosum KCTC 3525	1046593	PRJDA68079	68079	Terrabacteria group	Firmicutes	3.23441	40.9	-	BACM01	2407	-	-	6/21/11	9/16/15	Contig	Korea Research Institute of Bioscience and Biotechnology	SAMD00036557	GCA_000260375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/375/GCA_000260375.1_ASM26037v1	21994929	KCTC 3525
Thalassospira xiamenensis M-5 = DSM 17429	1123366	PRJNA161549	161549	Proteobacteria	Alphaproteobacteria	4.76895	54.7023	chromosome:NZ_CP004388.1/CP004388.1; plasmid unnamed:NZ_CP004389.1/CP004389.1	-	2	4440	4327	1/9/15	4/10/17	Complete Genome	The Third Institute of State Oceanic Administration (SOA)	SAMN02471162	GCA_000300235.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/235/GCA_000300235.2_ASM30023v2	23209216	M-5
Erwinia tracheiphila	65700	PRJNA272881	272881	Proteobacteria	Gammaproteobacteria	5.01596	50.6	-	JXNU01	7	5243	4216	4/21/15	4/10/17	Contig	Harvard University	SAMN03287578	GCA_000975275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/975/275/GCA_000975275.1_ASM97527v1	26044415	BuffGH
Oenococcus kitaharae DSM 17330	1045004	PRJNA165467	165467	Terrabacteria group	Firmicutes	1.84387	42.7	-	ATZG01	5	1874	1790	7/15/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441565	GCA_000428085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/085/GCA_000428085.1_ASM42808v1	-	DSM 17330
Rhodococcus ruber	1830	PRJEB6917	268807	Terrabacteria group	Actinobacteria	5.99067	70.2	-	CCSD01	115	5541	5305	10/16/14	4/10/17	Contig	Genoscope CEA	SAMEA2708319	GCA_000824945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/945/GCA_000824945.1_BDK_PRJEB6917_v1	25502680	-
Thermococcus barossii	54077	PRJNA274230	274230	Euryarchaeota	Thermococci	1.92242	54.7	chromosome:NZ_CP015101.1/CP015101.1	-	1	2071	1996	7/5/17	7/7/17	Complete Genome	Ecole Normale Superieure de Lyon	SAMN03324153	GCA_002214465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/465/GCA_002214465.1_ASM221446v1	-	SHCK-94
Alcanivorax sp. NBRC 101098	1113728	PRJDB2892	248804	Proteobacteria	Gammaproteobacteria	3.09542	54.7	chromosome:NZ_AP014613.1/AP014613.1	-	1	2816	2731	7/3/14	4/10/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00018424	GCA_001010505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/505/GCA_001010505.1_ASM101050v1	25125640	NBRC 101098
Campylobacter cuniculorum DSM 23162 = LMG 24588	1121267	PRJNA221001	221001	Proteobacteria	delta/epsilon subdivisions	1.87141	31.3	-	JHZL01	44	1891	1757	4/8/14	6/21/17	Scaffold	DOE Joint Genome Institute	SAMN02743970	GCA_000621005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/005/GCA_000621005.1_ASM62100v1	-	DSM 23162
Pseudomonas synxantha BG33R	96901	PRJNA67541	67541	Proteobacteria	Gammaproteobacteria	6.29749	59.7	chromosome:NZ_CM001514.1/CM001514.1	AHPP01	1	14283	13861	5/21/12	6/15/17	Chromosome	"USDA - Agricultural Research Service, USA"	SAMN02436586	GCA_000263715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/715/GCA_000263715.2_ASM26371v2	22792073	BG33R
Corynebacterium durum	61592	PRJNA299404	299404	Terrabacteria group	Actinobacteria	3.99363	48.8	-	LSKR01	4274	-	-	2/10/16	2/10/16	Contig	Georgia Institute of Technology	SAMN04299494	GCA_001557475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/475/GCA_001557475.1_ASM155747v1	-	CCH6-D9
Arcobacter thereius	544718	PRJNA283161	283161	Proteobacteria	delta/epsilon subdivisions	1.97404	26.7	-	LCUK01	17	2030	1971	7/26/16	4/13/17	Contig	Ghent University	SAMN03609673	GCA_001695345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/345/GCA_001695345.1_ASM169534v1	-	452
Arcobacter skirrowii	28200	PRJNA307998	307998	Proteobacteria	delta/epsilon subdivisions	1.86748	27.8	-	LRUW01	51	1950	1880	2/25/16	4/12/17	Contig	Agriculture and Agri-Food Canada	SAMN04386097	GCA_001572935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/935/GCA_001572935.1_ASM157293v1	-	L402
Micavibrio aeruginosavorus ARL-13	856793	PRJNA49751	49751	Proteobacteria	Alphaproteobacteria	2.48198	54.7	chromosome:NC_016026.1/CP002382.1	-	1	2370	2314	9/23/11	4/7/17	Complete Genome	"University of Virginia, Department of Biology"	SAMN02604252	GCA_000226315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/315/GCA_000226315.1_ASM22631v1	21936919	ARL-13
Arcobacter cryaerophilus	28198	PRJNA307600	307600	Proteobacteria	delta/epsilon subdivisions	2.31304	27	-	LRUQ01	96	2355	2246	2/25/16	4/12/17	Contig	Agriculture and Agri-Food Canada	SAMN04386092	GCA_001572865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/865/GCA_001572865.1_ASM157286v1	-	L397
Halothiobacillus neapolitanus c2	555778	PRJNA31049	31049	Proteobacteria	Gammaproteobacteria	2.58289	54.7	chromosome:NC_013422.1/CP001801.1	-	1	2412	2326	10/21/09	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598477	GCA_000024765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/765/GCA_000024765.1_ASM2476v1	-	c2
Campylobacter helveticus	28898	PRJEB20319	382117	Proteobacteria	delta/epsilon subdivisions	1.82463	34.4	-	FWXG01	60	1969	1836	4/8/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745125	GCA_900176295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/295/GCA_900176295.1_IMG-taxon_2585428144_annotated_assembly	-	ATCC 51209
Campylobacter avium	522485	PRJNA381435	381435	Proteobacteria	delta/epsilon subdivisions	1.73548	34.2	-	NKYN01	6	1758	1680	8/11/17	8/15/17	Contig	"USDA, ARS, WRRC"	SAMN06677396	GCA_002245935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/935/GCA_002245935.1_ASM224593v1	-	87/06
Campylobacter lanienae	75658	PRJNA341008	341008	Proteobacteria	delta/epsilon subdivisions	1.65542	34.5	-	MJBG01	84	1690	1591	5/15/17	9/19/17	Contig	USDA	SAMN05687028	GCA_002138595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/595/GCA_002138595.1_ASM213859v1	28854596	RM6140
Alcanivorax borkumensis SK2	393595	PRJNA13005	13005	Proteobacteria	Gammaproteobacteria	3.12014	54.7	chromosome:NC_008260.1/AM286690.1	-	1	2832	2750	7/23/06	4/6/17	Complete Genome	German Research Centre for Biotechnology	SAMEA3138202	GCA_000009365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/365/GCA_000009365.1_ASM936v1	16878126	SK2
Klebsiella oxytoca	571	PRJNA246471	246471	Proteobacteria	Gammaproteobacteria	6.63054	54.6975	chromosome:NZ_CP011597.1/CP011597.1; plasmid pCAV1099-111:NZ_CP011594.1/CP011594.1; plasmid pCAV1099-114:NZ_CP011596.1/CP011596.1; plasmid pCAV1099-5410:NZ_CP011592.1/CP011592.1; plasmid pCAV1099-69:NZ_CP011593.1/CP011593.1; plasmid pKPC_CAV1099:NZ_CP011595.1/CP011595.1	-	6	6522	6232	6/9/15	2/21/17	Complete Genome	University of Oxford	SAMN03733663	GCA_001022295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/295/GCA_001022295.1_ASM102229v1	-	CAV1099
Endozoicomonas montiporae	1027273	PRJNA252578	252578	Proteobacteria	Gammaproteobacteria	5.6023	48.5	-	JOKG01	20	5083	4725	7/7/14	4/10/17	Scaffold	Woods Hole Oceanographic Institution	SAMN02851611	GCA_000722565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/565/GCA_000722565.1_ASM72256v1	25125646	LMG 24815
Kluyvera ascorbata	51288	PRJNA275512	275512	Proteobacteria	Gammaproteobacteria	4.98655	54.8	-	LSME01	90	4752	4561	7/10/16	2/21/17	Contig	"West China Hospital, Sichuan University"	SAMN04482606	GCA_001682915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/915/GCA_001682915.1_ASM168291v1	-	WCH1410
Buttiauxella agrestis	82977	PRJNA255777	255777	Proteobacteria	Gammaproteobacteria	4.76674	49.3	-	JPRU01	12	4500	4277	8/5/14	4/9/17	Contig	CDC	SAMN02928654	GCA_000737905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/905/GCA_000737905.1_ASM73790v1	25323724	MCE
Leminorella grimontii ATCC 33999 = DSM 5078	1005999	PRJNA65515	65515	Proteobacteria	Gammaproteobacteria	4.23561	53.9	-	JMPN01	57	3834	3728	7/28/14	4/9/17	Contig	UW-GEL	SAMN02743266	GCA_000735425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/425/GCA_000735425.1_GLGR_DRAFTv1	-	ATCC 33999
Tatumella ptyseos ATCC 33301	1005995	PRJNA65509	65509	Proteobacteria	Gammaproteobacteria	3.53241	51.6	-	JMPR01	89	3355	3202	7/28/14	4/9/17	Contig	UW-GEL	SAMN02743387	GCA_000735525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/525/GCA_000735525.1_GTPT_DRAFTv1	-	ATCC 33301
Raoultella planticola	575	PRJNA256278	256278	Proteobacteria	Gammaproteobacteria	5.78088	55.4	-	JPRG01	18	5613	5291	8/5/14	4/2/17	Contig	CDC	SAMN02934454	GCA_000737915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/915/GCA_000737915.1_ASM73791v1	25323725	CHB
Octadecabacter temperatus	1458307	PRJNA290421	290421	Proteobacteria	Alphaproteobacteria	3.26463	54.6662	chromosome:NZ_CP012160.1/CP012160.1; plasmid OSB_p1:NZ_CP012161.1/CP012161.1	-	2	3291	3218	7/28/15	4/10/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03891579	GCA_001187845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/845/GCA_001187845.1_ASM118784v1	26358607	SB1
Bartonella schoenbuchensis m07a	1094496	PRJNA73949	73949	Proteobacteria	Alphaproteobacteria	1.68047	37.7054	plasmid pML:NZ_CM001845.1/CM001845.1; plasmid pMS:NZ_CM001846.1/CM001846.1	AGWC01	5	1537	1426	4/10/13	4/8/17	Scaffold	Uppsala University	SAMN02472035	GCA_000385435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/435/GCA_000385435.1_m07aNrPeIrM01	23555299	m07a
Myroides odoratus CIP 103059	883155	PRJNA52197	52197	FCB group	Bacteroidetes/Chlorobi group	4.22764	35.9	-	AGZJ01	14	3819	3658	9/17/12	5/19/17	Scaffold	Broad Institute	SAMN02463912	GCA_000297875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/875/GCA_000297875.1_Myro_odor_CIP103059_G12587_V1	-	CIP 103059
Methylovorus glucosetrophus SIP3-4	582744	PRJNA33241	33241	Proteobacteria	Betaproteobacteria	3.08201	54.6472	chromosome:NC_012969.1/CP001674.1; plasmid pMsip01:NC_012970.1/CP001675.1; plasmid pMsip02:NC_012972.1/CP001676.1	-	3	2956	2884	7/15/09	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598498	GCA_000023745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/745/GCA_000023745.1_ASM2374v1	21622745	SIP3-4
Acinetobacter ursingii ANC 3649	1257043	PRJNA183280	183280	Proteobacteria	Gammaproteobacteria	3.82548	39.9	-	APQC01	5	3621	3384	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN01087839	GCA_000368845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/845/GCA_000368845.1_Acin_ursi_NIPH_ANC_3649_V1	-	ANC 3649
Sulfobacillus thermosulfidooxidans str. Cutipay	1214914	PRJNA171285	171285	Terrabacteria group	Firmicutes	3.86201	49.3	-	ALWJ01	35	3878	3645	8/27/12	4/7/17	Scaffold	Mathomics	SAMN02471698	GCA_000294425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/425/GCA_000294425.1_ASM29442v1	23105067	Cutipay
Alcanivorax dieselolei	285091	PRJEB10232	299385	Proteobacteria	Gammaproteobacteria	4.79066	61.4	-	CZHF01	57	4428	4305	10/21/15	4/11/17	Contig	UNIMI	SAMEA3500511	GCA_001411415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/415/GCA_001411415.1_Alcanivorax_dieselolei_strain_KS-293	-	KS-293
Leptonema illini	183	PRJNA257152	257152	Spirochaetes	Spirochaetia	4.42775	54.3	-	JQDG01	121	4198	4098	3/2/17	3/4/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947961	GCA_002009735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/735/GCA_002009735.1_ASM200973v1	-	56270
Natronobacterium gregoryi	44930	PRJEB17391	351580	Euryarchaeota	Halobacteria	3.72347	62.3	-	FORO01	86	3760	3524	10/30/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443661	GCA_900114025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/025/GCA_900114025.1_IMG-taxon_2693429900_annotated_assembly	-	SP2
Emticicia oligotrophica	312279	PRJEB19501	380479	FCB group	Bacteroidetes/Chlorobi group	4.10109	36.4	-	FXVD01	121	-	-	5/12/17	5/12/17	Scaffold	UNIVERSITY OF DELHI	SAMEA103894553	GCA_900177565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/565/GCA_900177565.1_Emticicia_sp._MM	-	-
Kitasatospora setae	2066	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.56095	74.3	-	JNWY01	298	7508	7132	7/1/14	4/9/17	Contig	University of Illinois	SAMN02645203	GCA_000716965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/965/GCA_000716965.1_ASM71696v1	-	NRRL B-16185
Mycobacterium rhodesiae JS60	931627	PRJNA60639	60639	Terrabacteria group	Actinobacteria	7.2816	66.1	-	AGIQ01	31	7036	6811	10/18/11	5/18/17	Contig	DOE Joint Genome Institute	SAMN02256528	GCA_000230935.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/935/GCA_000230935.2_ASM23093v2	-	JS60
Enterobacter ludwigii	299767	PRJNA343411	343411	Proteobacteria	Gammaproteobacteria	4.95277	54.6038	chromosome:NZ_CP017279.1/CP017279.1; plasmid pEN-119:NZ_CP017280.1/CP017280.1	-	2	4751	4530	10/3/16	4/5/17	Complete Genome	Zhejiang Sci-Tech University	SAMN05787341	GCA_001750725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/725/GCA_001750725.1_ASM175072v1	-	EN-119
Yokenella regensburgei ATCC 43003	1002368	PRJNA65133	65133	Proteobacteria	Gammaproteobacteria	4.68122	54.8	-	AGCL01	16	4544	4393	12/21/11	6/15/17	Scaffold	Washington University Genome Center	SAMN02299454	GCA_000239335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/335/GCA_000239335.1_ASM23933v1	-	ATCC 43003
Eubacterium sulci ATCC 35585	888727	PRJNA53047	53047	Terrabacteria group	Firmicutes	1.72867	39.9	-	JATQ01	18	1657	1578	1/31/14	4/9/17	Contig	JCVI	SAMN02641587	GCA_000526055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/055/GCA_000526055.1_EsuATCC35585v1.0	-	ATCC 35585
Caballeronia glathei	60547	PRJEB6934	260436	Proteobacteria	Betaproteobacteria	7.53157	64.7	-	CCNS01	138	-	-	9/5/14	5/14/15	Contig	UZH	SAMEA2691382	GCA_000751215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/215/GCA_000751215.1_Bglat_v1	-	-
Mycobacterium chubuense	1800	PRJNA354248	354248	Terrabacteria group	Actinobacteria	5.94644	69.2	-	MVHO01	105	5655	5501	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064237	GCA_002086595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/595/GCA_002086595.1_ASM208659v1	-	DSM 44219
Leptotrichia wadei F0279	888055	PRJNA53015	53015	Fusobacteria	Fusobacteriia	2.35345	29.2	-	AWVM01	74	2197	2078	9/18/13	4/9/17	Scaffold	Washington University	SAMN02436884	GCA_000469405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/405/GCA_000469405.1_ASM46940v1	-	F0279
Leclercia adecarboxylata ATCC 23216 = NBRC 102595	911008	PRJNA59559	59559	Proteobacteria	Gammaproteobacteria	4.99116	55.6	-	JMPM01	169	4840	4578	7/28/14	4/9/17	Contig	UW-GEL (University of Wisconsin - Genome Evolution Laboratory)	SAMN02743265	GCA_000735515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/515/GCA_000735515.1_GLAD_DRAFTv1	-	ATCC 23216
Porphyromonas catoniae F0037	1127696	PRJNA80249	80249	FCB group	Bacteroidetes/Chlorobi group	2.10148	51	-	AMEQ01	18	1671	1591	12/10/12	4/11/17	Scaffold	Washington University	SAMN02436931	GCA_000318215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/215/GCA_000318215.2_ASM31821v2	-	F0037
Mycobacterium tusciae JS617	710687	PRJNA52639	52639	Terrabacteria group	Actinobacteria	7.30641	65.4	-	AGJJ02	4	7013	6659	1/23/12	2/12/16	Scaffold	DOE Joint Genome Institute	SAMN02256521	GCA_000243415.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/415/GCA_000243415.3_ASM24341v3	-	JS617
Natrinema pellirubrum DSM 15624	797303	PRJNA174937	174937	Euryarchaeota	Halobacteria	4.26445	64.1	-	AOIE01	134	4248	3964	2/4/13	5/19/17	Contig	"University of California, Davis"	SAMN02471626	GCA_000337635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/635/GCA_000337635.1_ASM33763v1	25393412	DSM 15624
Caldithrix abyssi DSM 13497	880073	PRJNA51779	51779	Calditrichaeota	Calditrichae	4.95544	45.1	chromosome:NZ_CM001402.1/CM001402.1	AGCQ01	1	3916	3821	1/9/12	4/7/17	Chromosome	JGI	SAMN02261371	GCA_000241815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/815/GCA_000241815.1_ASM24181v1	-	DSM 13497
Turicella otitidis ATCC 51513	883169	PRJEB96	170046	Terrabacteria group	Actinobacteria	2.15486	70.5	-	CAJZ01	32	1863	1686	7/4/12	4/8/17	Scaffold	Center for Biotechnology	SAMEA2272804	GCA_000297795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/795/GCA_000297795.2_ASM29779v2	-	ATCC 51513
Massilia timonae CCUG 45783	883126	PRJNA52185	52185	Proteobacteria	Betaproteobacteria	6.1365	65.2	-	AGZI01	14	5308	5095	11/27/12	5/19/17	Scaffold	Broad Institute	SAMN02463908	GCA_000315425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/425/GCA_000315425.1_Mass_timo_CCUG_45783_V1	-	CCUG 45783
Bergeyella zoohelcum CCUG 30536	883098	PRJNA52165	52165	FCB group	Bacteroidetes/Chlorobi group	2.49918	36.5	-	AGYB01	5	2361	2258	9/18/12	4/8/17	Scaffold	Broad Institute	SAMN02463903	GCA_000301095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/095/GCA_000301095.1_Berg_zooh_CCUG_30536_V1	-	CCUG 30536
Actinotignum schaalii FB123-CNA-2	883067	PRJNA52093	52093	Terrabacteria group	Actinobacteria	2.09236	60.9	-	AGWM01	4	1754	1678	6/13/13	4/8/17	Scaffold	Broad Institute	SAMN02596751	GCA_000411135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/135/GCA_000411135.1_Acti_scha_FB123-CNA2_V1	-	FB123-CNA-2
Actinobaculum massiliense ACS-171-V-Col2	883066	PRJNA52091	52091	Terrabacteria group	Actinobacteria	2.03202	60.2	-	AGWL01	2	1745	1662	11/27/12	4/8/17	Scaffold	Broad Institute	SAMN02463883	GCA_000315465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/465/GCA_000315465.1_Acti_mass_ACS-171-V-COL2_V1	-	ACS-171-V-COL2
Saccharicrinis fermentans DSM 9555 = JCM 21142	869213	PRJDB624	238386	FCB group	Bacteroidetes/Chlorobi group	5.64952	37.4	-	BAMD01	299	4515	4011	2/27/14	4/17/17	Contig	The University of Tokyo	SAMD00008733	GCA_000583675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/675/GCA_000583675.1_ASM58367v1	24675859	JCM 21142
Halomicronema hongdechloris C2206	1641165	PRJNA280640	280640	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.57408	54.6	chromosome:NZ_CP021983.1/CP021983.1	-	1	5091	4682	6/16/17	6/24/17	Complete Genome	Macquarie University	SAMN03466112	GCA_002075285.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/285/GCA_002075285.2_ASM207528v2	26514405	C2206
[Clostridium] ultunense Esp	1288971	PRJEB1378	189739	Terrabacteria group	Firmicutes	6.15977	40.9	-	CARA01	1	6744	5711	2/21/13	1/30/15	Scaffold	SLU-GBC	SAMEA2272450	GCA_000344075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/075/GCA_000344075.2_CULT	23538905	Esp
Xanthomonas hortorum pv. carotae str. M081	863365	PRJNA50443	50443	Proteobacteria	Gammaproteobacteria	5.0524	63.7499	chromosome:NZ_CM002307.1/CM002307.1	AEEU01	1	8797	8435	12/10/13	4/17/17	Chromosome	Oregon State University	SAMN02470773	GCA_000505565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/565/GCA_000505565.1_XHC_1.0	21722296	M081
Herbaspirillum frisingense GSF30	864073	PRJNA50373	50373	Proteobacteria	Betaproteobacteria	5.40833	63	-	AEEC02	93	4919	4780	10/2/12	4/8/17	Contig	TU Darmstadt	SAMN02471292	GCA_000300975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/975/GCA_000300975.2_HFRIS_v2	23825472	GSF30
Enterobacter cloacae	550	PRJNA357031	357031	Proteobacteria	Gammaproteobacteria	4.79926	54.6	chromosome:NZ_CP018785.1/CP018785.1	-	1	4623	4409	3/13/17	3/15/17	Complete Genome	Harvard University	SAMN06130962	GCA_002025685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/685/GCA_002025685.1_ASM202568v1	28275097	AA4
Ruminiclostridium sp. KB18	1834198	PRJNA317592	317592	Terrabacteria group	Firmicutes	3.80284	54.6	chromosome:NZ_CP015400.2/CP015400.2	-	1	3908	3657	7/20/16	4/17/17	Complete Genome	University of Bern	SAMN04621621	GCA_001688705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/705/GCA_001688705.2_ASM168870v2	-	KB18
Burkholderia plantarii	41899	PRJNA323430	323430	Proteobacteria	Betaproteobacteria	8.02083	68.5	-	MKGK01	27	6920	6495	10/9/16	4/13/17	Scaffold	Zhejiang University	SAMN05178893	GCA_001755835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/755/835/GCA_001755835.1_ASM175583v1	-	ZJ171
Leptospirillum sp. Group II 'CF-1'	1660083	PRJNA284934	284934	Nitrospirae	Nitrospira	2.70932	54.6	chromosome:NZ_CP012147.1/CP012147.1	-	1	2731	2645	7/24/15	4/10/17	Complete Genome	Universidad de Santiago de Chile	SAMN03734635	GCA_001186405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/405/GCA_001186405.1_ASM118640v1	-	CF-1
Leptospirillum ferriphilum ML-04	1048260	PRJNA68175	68175	Nitrospirae	Nitrospira	2.40616	54.6	chromosome:NC_018649.1/CP002919.1	-	1	2475	2378	9/25/12	4/8/17	Complete Genome	"State Key Lab of Microbial Technology, Shandong University, Jinan, China"	SAMN02603870	GCA_000299235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/235/GCA_000299235.1_ASM29923v1	22203551	ML-04
Mycoplasma flocculare ATCC 27716	1004152	PRJNA65295	65295	Terrabacteria group	Tenericutes	0.763948	28.9	-	AFCG01	14	634	561	4/17/13	4/8/17	Contig	LNCC	SAMN02470252	GCA_000367185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/185/GCA_000367185.1_Mycoplasma_flocculare_genome	-	ATCC 27716
Methanocella arvoryzae MRE50	351160	PRJNA19641	19641	Euryarchaeota	Methanomicrobia	3.17992	54.6	chromosome:NC_009464.1/AM114193.2	-	1	3164	3058	7/21/06	4/7/17	Complete Genome	Max Planck Institute	SAMEA3138262	GCA_000063445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/063/445/GCA_000063445.1_ASM6344v1	16857943	MRE50
Pseudomonas viridiflava TA043	1357291	PRJNA211421	211421	Proteobacteria	Gammaproteobacteria	5.97921	59.2	-	AVDV01	218	5359	5203	8/20/13	4/2/17	Scaffold	University of Arizona	SAMN02471557	GCA_000452485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/485/GCA_000452485.1_TA043_042011_1.0	24459267	TA043
Wolbachia endosymbiont of Wuchereria bancrofti	96496	PRJNA43539	43539	Proteobacteria	Alphaproteobacteria	1.05233	34	-	ADHD01	763	-	-	2/7/13	2/7/14	Contig	Broad Institute	SAMN02595378	GCA_000338395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/338/395/GCA_000338395.1_ASM33839v1	23525074	-
Vibrio navarrensis	29495	PRJNA242769	242769	Proteobacteria	Gammaproteobacteria	4.16562	48.6	-	JMCI01	236	3955	3706	10/7/14	4/9/17	Contig	CDC	SAMN02708868	GCA_000764335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/335/GCA_000764335.1_08-2462v1.0	25414502	Aug-62
Streptomyces turgidiscabies	85558	PRJDB4008	287593	Terrabacteria group	Actinobacteria	10.5793	69.9	-	BCMN01	100	9331	8908	12/23/15	3/12/17	Scaffold	"Plant Pathology and Entomology, Kagoshima Institute for Agricultural Development"	SAMD00034891	GCA_001485145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/145/GCA_001485145.1_ASM148514v1	26941144	T45
Enterobacter cloacae subsp. cloacae ATCC 13047	716541	PRJNA45793	45793	Proteobacteria	Gammaproteobacteria	5.5988	54.5971	chromosome:NC_014121.1/CP001918.1; plasmid pECL_A:NC_014107.1/CP001919.1; plasmid pECL_B:NC_014108.1/CP001920.1	-	3	5639	5518	4/23/10	3/22/17	Complete Genome	"TEDA School of Biological Sciences and Biotechnology, Nankai University"	SAMN02603901	GCA_000025565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/565/GCA_000025565.1_ASM2556v1	20207761	ATCC 13047
Streptococcus ratti FA-1 = DSM 20564	699248	PRJNA179258	179258	Terrabacteria group	Firmicutes	2.03718	40.8	-	AOCD01	182	1970	1903	3/21/13	4/8/17	Contig	Institute of Bioprocess and Biosystems Engineering 	SAMN02469961	GCA_000347915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/915/GCA_000347915.1_DSM20564_V1	23805886	DSM 20564
Enterobacter cloacae ECNIH3	1333851	PRJNA202894	202894	Proteobacteria	Gammaproteobacteria	5.06139	54.5891	chromosome:NZ_CP008897.1/CP008897.1; plasmid pENT-576:NZ_CP008898.1/CP008898.1; plasmid pENT-8a4:NZ_CP008899.1/CP008899.1; plasmid pENT-d4a:NZ_CP008900.1/CP008900.1; plasmid pKPC-47e:NZ_CP008901.1/CP008901.1	-	5	4999	4691	9/9/14	4/2/17	Complete Genome	NISC	SAMN02713683	GCA_000750225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/225/GCA_000750225.1_ASM75022v1	-	ECNIH3
Paenibacillus alvei A6-6i-x	1117109	PRJNA77741	77741	Terrabacteria group	Firmicutes	6.47818	46.6	-	ATMS01	90	5709	5429	7/31/13	4/8/17	Contig	FDA	SAMN01816162	GCA_000442535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/535/GCA_000442535.1_CFSAN001085_1.0	23990585	A6-6i-x
Octadecabacter antarcticus 307	391626	PRJNA19333	19333	Proteobacteria	Alphaproteobacteria	4.87548	54.5768	chromosome:NC_020911.1/CP003740.1; plasmid pOA307_63:NC_020907.1/CP003741.1	-	2	5041	4488	4/8/13	5/19/17	Complete Genome	Moore Foundation	SAMN02603621	GCA_000155675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/675/GCA_000155675.2_ASM15567v2	23671678	307
Pseudomonas agarici NCPPB 2289	690598	PRJNA41633	41633	Proteobacteria	Gammaproteobacteria	5.51139	58.9	-	AKBQ01	119	4958	4414	7/23/12	5/19/17	Scaffold	The Sainsbury Laboratory	SAMN02471740	GCA_000280785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/785/GCA_000280785.1_ASM28078v1	-	NCPPB 2289
Enterobacter cloacae EcWSU1	1045856	PRJNA67983	67983	Proteobacteria	Gammaproteobacteria	4.79809	54.5297	chromosome:NC_016514.1/CP002886.1; plasmid pEcWSU1_A:NC_016515.1/CP002887.1	-	2	4695	4465	12/23/11	3/22/17	Complete Genome	Washington State University	SAMN02604307	GCA_000239975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/975/GCA_000239975.1_ASM23997v1	22675579	EcWSU1
Rubrobacter radiotolerans DSM 5868	643560	PRJEB20238	381577	Terrabacteria group	Actinobacteria	3.39807	66.5	-	FWWX01	4	3282	3183	4/6/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN00767673	GCA_900175965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/175/965/GCA_900175965.1_IMG-taxon_2505679031_annotated_assembly	-	DSM 5868
Alistipes finegoldii	214856	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	3.37209	57.8	-	CYYQ01	42	2867	2672	10/1/15	4/11/17	Contig	SC	SAMEA3545298	GCA_001405655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/655/GCA_001405655.1_13414_6_74	-	2789STDY5608890
Haloferax mediterranei ATCC 33500	523841	PRJNA238908	238908	Euryarchaeota	Halobacteria	3.9067	60.2417	chromosome:NZ_CP007551.1/CP007551.1; plasmid HMPLAS1:NZ_CP007554.1/CP007554.1; plasmid HMPLAS2:NZ_CP007553.1/CP007553.1; plasmid HMPLAS3:NZ_CP007552.1/CP007552.1	-	4	3882	3618	5/8/14	4/9/17	Chromosome	University of Alicante	SAMN02724739	GCA_000685635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/635/GCA_000685635.1_ASM68563v1	-	ATCC 33500
Haloarcula vallismortis	28442	PRJEB16558	349834	Euryarchaeota	Halobacteria	3.89664	61.8	-	FNOF01	55	3927	3784	10/22/16	3/22/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05443574	GCA_900106715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/715/GCA_900106715.1_IMG-taxon_2693429892_annotated_assembly	-	DSM 3756
Flavonifractor plautii ATCC 29863	411475	PRJNA18189	18189	Terrabacteria group	Firmicutes	3.82012	61	-	AGCK01	242	3797	3603	12/21/11	3/30/17	Scaffold	Washington University Genome Sequencing Center	SAMN00627089	GCA_000239295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/295/GCA_000239295.1_ASM23929v1	-	ATCC 29863
Anaerostipes hadrus DSM 3319	649757	PRJNA38323	38323	Terrabacteria group	Firmicutes	2.77223	37.1	-	AMEY01	73	2702	2585	12/10/12	4/4/17	Scaffold	WUGSC	SAMN02436796	GCA_000332875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/875/GCA_000332875.2_ASM33287v2	-	DSM 3319
Aerococcus christensenii	87541	PRJNA272079	272079	Terrabacteria group	Firmicutes	1.71061	38.8	-	LSCQ01	60	1653	1535	2/8/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN03842031	GCA_001552755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/755/GCA_001552755.1_ASM155275v1	-	KA00635
Citrobacter rodentium ICC168	637910	PRJEA34685	34685	Proteobacteria	Gammaproteobacteria	5.44428	54.5286	chromosome:NC_013716.1/FN543502.1; plasmid pCROD1:NC_013717.1/FN543503.1; plasmid pCROD2:NC_013718.1/FN543504.1; plasmid pCROD3:NC_013719.1/FN543505.1	-	4	5351	4930	1/5/10	4/7/17	Complete Genome	Wellcome Trust Sanger Institute	SAMEA2272524	GCA_000027085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/027/085/GCA_000027085.1_ASM2708v1	19897651	ICC168
Shimwellia blattae DSM 4481 = NBRC 105725	630626	PRJDB16	77967	Proteobacteria	Gammaproteobacteria	4.0329	56.6	-	BAHA01	74	3877	3736	8/30/12	4/8/17	Contig	National Institute of Technology and Evaluation (NITE)	SAMD00041804	GCA_000327265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/265/GCA_000327265.1_ASM32726v1	-	NBRC 105725
Thermovirga lienii	336261	PRJNA278302	278302	Synergistetes	Synergistia	1.00228	47	-	LGFS01	291	1232	1232	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445145	GCA_001508955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/955/GCA_001508955.1_ASM150895v1	26787827	-
Planktothrix rubescens	59512	PRJEB10990	355100	Terrabacteria group	Cyanobacteria/Melainabacteria group	11.3941	44.8	-	CZCZ01	10	5047	4745	11/28/16	6/14/17	Scaffold	Genoscope CEA	SAMEA3590993	GCA_900009275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/275/GCA_900009275.1_AAI_PRJEB10990	-	7821
Nonlabens dokdonensis	328515	PRJNA320927	320927	FCB group	Bacteroidetes/Chlorobi group	3.03815	35.2	-	MAAX01	214	2822	2765	5/31/17	5/31/17	Scaffold	Lawrence Berkeley National Lab	SAMN05179571	GCA_002162835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/835/GCA_002162835.1_ASM216283v1	28652349	-
Spiroplasma melliferum IPMB4A	1129368	PRJNA80357	80357	Terrabacteria group	Tenericutes	1.09885	27.5	-	AMGI01	24	1007	944	12/31/12	4/8/17	Contig	Academia Sinica	SAMN02393725	GCA_000328865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/865/GCA_000328865.1_SMIPMB4A_v3	23324436	IPMB4A
Acidaminococcus intestini DSM 21505	1120921	PRJNA188796	188796	Terrabacteria group	Firmicutes	2.28247	50	-	AULA01	55	2242	2063	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441487	GCA_000425045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/045/GCA_000425045.1_ASM42504v1	-	DSM 21505
Pseudomonas tolaasii PMS117	1030145	PRJNA66663	66663	Proteobacteria	Gammaproteobacteria	7.00782	60.2	-	AJXG01	357	6393	6011	7/9/12	5/19/17	Contig	University of Exeter	SAMN02471724	GCA_000276565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/565/GCA_000276565.1_ASM27656v1	-	PMS117
Candidatus Kuenenia stuttgartiensis enrichment culture clone RU1	1230345	PRJNA168041	168041	PVC group	Planctomycetes	3.76466	41.1	-	AMCG01	2717	-	-	11/26/12	8/11/14	Contig	Radboud University Nijmegen	SAMN02981448	GCA_000315115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/115/GCA_000315115.1_RU1_contigs	-	-
Streptococcus canis	1329	PRJNA394100	394100	Terrabacteria group	Firmicutes	2.04593	39.6	-	NMRV01	62	1987	1834	7/28/17	8/7/17	Contig	"Institute for Microbiology and Epizootics, Freie University Berlin"	SAMN07348474	GCA_002234935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/234/935/GCA_002234935.1_ASM223493v1	-	G361
Sodalis glossinidius str. 'morsitans'	343509	PRJNA16309	16309	Proteobacteria	Gammaproteobacteria	4.2925	54.5066	chromosome:NC_007712.1/AP008232.1; plasmid pSG1:NC_007713.1/AP008233.1; plasmid pSG2:NC_007714.1/AP008234.1; plasmid pSG3:NC_007715.1/AP008235.1	-	4	4736	3259	1/11/06	4/17/17	Complete Genome	"Kitasato Institute for Life Sciences, Japan"	SAMD00061079	GCA_000010085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/085/GCA_000010085.1_ASM1008v1	16365377	morsitans
Prochloron didemni P3-Solomon	910458	PRJNA82335	82335	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.86255	41.9	-	AFSK01	1964	-	-	12/29/11	8/12/14	Scaffold	Institute for Genome Sciences	SAMN02954251	GCA_000252465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/465/GCA_000252465.1_ASM25246v1	22123943	-
Enterobacter cloacae	550	PRJNA285312	285312	Proteobacteria	Gammaproteobacteria	4.90498	54.5	chromosome:NZ_CP011798.1/CP011798.1	-	1	4730	4528	6/19/15	3/26/17	Complete Genome	University of New Brunswick	SAMN03743787	GCA_001029645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/645/GCA_001029645.1_ASM102964v1	26251488	UW5
Leptospirillum ferriphilum YSK	1441628	PRJNA232614	232614	Nitrospirae	Nitrospira	2.33059	54.5	chromosome:NZ_CP007243.1/CP007243.1	-	1	2361	2273	5/27/14	4/9/17	Complete Genome	Central South University	SAMN03081536	GCA_000695975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/975/GCA_000695975.1_ASM69597v1	26064886	YSK
Dickeya chrysanthemi Ech1591	561229	PRJNA31295	31295	Proteobacteria	Gammaproteobacteria	4.81385	54.5	chromosome:CP001655.1	-	1	4367	4163	7/2/09	3/10/15	Complete Genome	US DOE Joint Genome Institute	SAMN02598480	GCA_000023565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/565/GCA_000023565.1_ASM2356v1	-	Ech1591
Mycobacterium chelonae	1774	PRJNA251569	251569	Terrabacteria group	Actinobacteria	4.89803	63.9	chromosome:NZ_CP010946.1/CP010946.1	-	1	4804	4672	4/14/15	4/10/17	Chromosome	National Jewish Health	SAMN02837161	GCA_000971805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/805/GCA_000971805.1_ASM97180v1	26021923	ATCC 35752
Rhizobium tropici	398	PRJNA247574	247574	Proteobacteria	Alphaproteobacteria	6.99287	60	-	JUHP01	37	6622	6434	12/9/14	4/10/17	Scaffold	DOE Joint Genome Institute	SAMN02787119	GCA_000799905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/905/GCA_000799905.1_ASM79990v1	-	YR530
Legionella hackeliae	449	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	3.58373	38.9	-	LNYF01	27	3241	3095	12/15/15	4/11/17	Scaffold	Tel Aviv University	SAMN04274777	GCA_001467705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/705/GCA_001467705.1_ASM146770v1	26752266	798-PA-H
Desulfatibacillum alkenivorans AK-01	439235	PRJNA19449	19449	Proteobacteria	delta/epsilon subdivisions	6.51707	54.5	chromosome:NC_011768.1/CP001322.1	-	1	5442	5340	12/24/08	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000039	GCA_000021905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/905/GCA_000021905.1_ASM2190v1	21651686	AK-01
Atopobium minutum 10063974	997872	PRJNA64799	64799	Terrabacteria group	Actinobacteria	1.70697	48.9	-	AGXC01	2	1583	1511	4/8/13	4/8/17	Scaffold	Broad Institute	SAMN02596754	GCA_000364325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/325/GCA_000364325.1_Atop_minu_V1	-	10063974
Wolbachia endosymbiont of Onchocerca volvulus	77551	PRJNA43537	43537	Proteobacteria	Alphaproteobacteria	0.444344	32.8	-	ADHE01	341	-	-	2/7/13	2/7/14	Contig	Broad Institute	SAMN02595379	GCA_000338375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/338/375/GCA_000338375.1_ASM33837v1	23525074	-
Methanoregula boonei 6A8	456442	PRJNA18505	18505	Euryarchaeota	Methanomicrobia	2.54294	54.5	chromosome:NC_009712.1/CP000780.1	-	1	2588	2513	7/26/07	8/28/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598409	GCA_000017625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/625/GCA_000017625.1_ASM1762v1	-	6A8
Thermodesulfobacterium commune DSM 2178	289377	PRJNA239504	239504	Thermodesulfobacteria	Thermodesulfobacteria	1.72699	36.9	-	JQLF01	29	1765	1657	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02744091	GCA_000746435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/435/GCA_000746435.1_ASM74643v1	-	DSM 2178
Acetobacter senegalensis	446692	PRJEB7128	307324	Proteobacteria	Alphaproteobacteria	3.96991	54.4792	chromosome I:NZ_LN606600.1/LN606600.1; plasmid 1P:NZ_LN606601.1/LN606601.1	-	2	3687	3410	1/3/16	4/11/17	Complete Genome	Vrije Universiteit Brussel	SAMEA2738517	GCA_001499615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/615/GCA_001499615.1_Acetobacter_senegalensis_108B	-	108B
Actinomyces naeslundii str. Howell 279	1115803	PRJNA78549	78549	Terrabacteria group	Actinobacteria	3.11434	67.9	-	ALJK01	243	2765	2307	8/8/12	4/10/17	Contig	J. Craig Venter Institute	SAMN00828754	GCA_000285995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/995/GCA_000285995.1_AneasH279v1.0	-	Howell 279
Corynebacterium ulcerans	65058	PRJNA386599	386599	Terrabacteria group	Actinobacteria	2.57241	54.4	chromosome:NZ_CP021417.1/CP021417.1	-	1	2395	2035	5/31/17	6/2/17	Complete Genome	UFMG	SAMN07109093	GCA_002162115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/115/GCA_002162115.1_ASM216211v1	25240511	PO100/5
Spirosoma rigui	564064	PRJNA378889	378889	FCB group	Bacteroidetes/Chlorobi group	5.8284	54.4	chromosome:NZ_CP020105.1/CP020105.1	-	1	4774	4647	3/21/17	3/24/17	Complete Genome	Seoul Women's University	SAMN06554015	GCA_002067135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/067/135/GCA_002067135.1_ASM206713v1	-	KCTC 12531
Dickeya chrysanthemi NCPPB 402	1223569	PRJNA172902	172902	Proteobacteria	Gammaproteobacteria	4.70035	54.1876	chromosome:NZ_CM001974.1/CM001974.1	AOOA01	21	4267	3988	6/4/13	4/8/17	Chromosome	James Hutton Institute	SAMN02470094	GCA_000406105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/105/GCA_000406105.1_DCH402_1.0	24265502	NCPPB 402
Cedecea neteri	158822	PRJNA260769	260769	Proteobacteria	Gammaproteobacteria	4.96544	54.4	chromosome:NZ_CP009458.1/CP009458.1	-	1	4699	4521	9/26/14	4/9/17	Complete Genome	University of Malaya	SAMN03031216	GCA_000758305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/305/GCA_000758305.1_ASM75830v1	-	M006
Mycoplasma iowae DK-CPA	1394179	PRJNA217423	217423	Terrabacteria group	Tenericutes	1.18412	24.5	-	AWQU01	89	961	888	7/25/14	4/9/17	Contig	University of Alabama at Birmingham	SAMN02335083	GCA_000733685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/685/GCA_000733685.1_MycoIowaeDkcpa1.0	25127127	DK-CPA
Candidatus Glomeribacter gigasporarum BEG34	1070319	PRJEA69997	69997	Proteobacteria	Betaproteobacteria	1.72695	54.8	-	CAFB01	124	1912	1658	9/20/11	4/7/17	Scaffold	Consiglio Nazionale delle Ricerche (CNR)	SAMEA2272654	GCA_000227585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/585/GCA_000227585.1_ASM22758v1	-	BEG34
Komagataeibacter europaeus	33995	PRJNA292110	292110	Proteobacteria	Alphaproteobacteria	4.11377	61.3	-	LHUQ01	116	3941	3593	8/21/15	4/10/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03964925	GCA_001273645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/645/GCA_001273645.1_ASM127364v1	26494678	CECT 8546
Enterobacter cloacae P101	1354030	PRJNA210654	210654	Proteobacteria	Gammaproteobacteria	5.36993	54.4	chromosome:NZ_CP006580.1/CP006580.1	-	1	5303	5037	12/31/13	3/24/17	Complete Genome	Washington State University	SAMN02641647	GCA_000512375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/375/GCA_000512375.1_ASM51237v1	25197457	P101
Streptococcus sobrinus W1703	1227275	PRJNA173941	173941	Terrabacteria group	Firmicutes	2.11248	43.4	-	AWVA01	83	2043	1899	9/16/13	4/4/17	Scaffold	Washington University	SAMN02436725	GCA_000467915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/915/GCA_000467915.2_ASM46791v2	-	W1703
Pantoea sp. At-9b	592316	PRJNA33803	33803	Proteobacteria	Gammaproteobacteria	6.31278	54.3247	chromosome:NC_014837.1/CP002433.1; plasmid pPAT9B01:NC_014838.1/CP002434.1; plasmid pPAT9B02:NC_014839.1/CP002435.1; plasmid pPAT9B03:NC_014840.1/CP002436.1; plasmid pPAT9B04:NC_014841.1/CP002437.1; plasmid pPAT9B05:NC_014842.1/CP002438.1	-	6	5968	5753	1/4/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002769	GCA_000175935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/935/GCA_000175935.2_ASM17593v2	-	At-9b
Streptomyces chartreusis NRRL 3882	1079985	PRJNA72671	72671	Terrabacteria group	Actinobacteria	9.30061	69.6	-	AGDD01	3246	-	-	9/26/11	1/8/14	Scaffold	"US Dept of Agriculture, NCAUR-USDA"	SAMN02471830	GCA_000226435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/435/GCA_000226435.1_ASM22643v1	22123769	NRRL 3882
Halobiforma lacisalsi AJ5	358396	PRJNA174894	174894	Euryarchaeota	Halobacteria	4.33858	65.3	-	AOLZ01	79	4206	4046	2/4/13	5/18/17	Contig	"University of California, Davis"	SAMN02471659	GCA_000336655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/655/GCA_000336655.1_ASM33665v1	25393412	AJ5
Acidithiobacillus thiooxidans A01	1432062	PRJNA230432	230432	Proteobacteria	Acidithiobacillia	3.82016	53.1	-	AZMO01	213	4131	3719	2/5/14	4/2/17	Contig	Central South University	SAMN02952958	GCA_000559045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/045/GCA_000559045.1_AcidThiA01	24699951	A01
Taylorella asinigenitalis ATCC 700933	1408475	PRJNA223125	223125	Proteobacteria	Betaproteobacteria	1.61786	39.1	-	JHXN01	51	1536	1440	4/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743890	GCA_000687755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/755/GCA_000687755.1_ASM68775v1	-	ATCC 700933
Afipia felis	1035	PRJEB5526	244985	Proteobacteria	Alphaproteobacteria	3.98965	61.1	-	CCAZ02	11	3958	3388	5/8/14	4/10/17	Scaffold	URMITE	SAMEA3146256	GCA_001051035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/035/GCA_001051035.2_ASM105103v2	25540358	76713
Corynebacterium glutamicum	1718	PRJNA350501	350501	Terrabacteria group	Actinobacteria	2.84337	54.3	chromosome:CP017995.1	-	1	2712	2606	8/30/17	8/30/17	Complete Genome	Bielefeld University	SAMN05908976	GCA_002277975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/975/GCA_002277975.1_ASM227797v1	-	C1
Singulisphaera acidiphila DSM 18658	886293	PRJNA82973	82973	PVC group	Planctomycetes	9.728	61.8	-	AHZQ01	81	7736	7068	3/21/12	5/19/17	Scaffold	Building No.11|Beishan Industial Zone|Yantian District|Shenzhen 518083|China 	SAMN02469378	GCA_000255675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/675/GCA_000255675.1_ASM25567v1	22740668	DSM 18658
Flavobacterium branchiophilum	55197	PRJNA354433	354433	FCB group	Bacteroidetes/Chlorobi group	3.5804	32.8	-	MUGT01	241	3194	3024	7/12/17	7/14/17	Scaffold	FDA	SAMN06049065	GCA_002217205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/205/GCA_002217205.1_ASM221720v1	-	ATCC 35035
Chloracidobacterium thermophilum	458033	PRJNA301138	301138	Acidobacteria	Blastocatellia	3.60036	62.4	-	LMXM01	8	2981	2893	12/28/15	4/11/17	Contig	USAFA	SAMN04238703	GCA_001482755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/755/GCA_001482755.1_ASM148275v1	26893414	OC1
Corynebacterium glutamicum	1718	PRJNA393604	393604	Terrabacteria group	Actinobacteria	3.31993	54.3	chromosome:NZ_CP022394.1/CP022394.1	-	1	3125	2875	7/17/17	7/19/17	Complete Genome	"State key lab of food science and technology, Jiangnan University"	SAMN07337837	GCA_002220135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/135/GCA_002220135.1_ASM222013v1	-	WM001
Pseudomonas sp. M30-35	1981174	PRJNA383617	383617	Proteobacteria	Gammaproteobacteria	4.92695	54.3	chromosome:NZ_CP020892.1/CP020892.1	-	1	4504	4361	6/2/17	6/5/17	Complete Genome	Lanzhou University	SAMN06768091	GCA_002163625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/625/GCA_002163625.1_ASM216362v1	-	M30-35
Dietzia alimentaria	665550	PRJNA338198	338198	Terrabacteria group	Actinobacteria	3.71392	69.8	-	MDCG01	419	3664	2937	9/9/16	4/13/17	Contig	Thompson Rivers University	SAMN05526183	GCA_001722515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/515/GCA_001722515.1_ASM172251v1	-	BP 27/1
Saprospira grandis DSM 2844	694433	PRJNA61003	61003	FCB group	Bacteroidetes/Chlorobi group	4.49525	46	-	AGRT01	5	4080	3785	6/29/12	4/7/17	Scaffold	JGI	SAMN02261388	GCA_000275825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/825/GCA_000275825.1_ASM27582v1	22768364	DSM 2844
Proteus vulgaris	585	PRJNA244574	244574	Proteobacteria	Gammaproteobacteria	3.97358	37.9	-	JPIX01	2	3676	3520	9/16/14	4/10/17	Scaffold	Los Alamos National Laboratory	SAMN02905115	GCA_000754995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/995/GCA_000754995.1_PVA	25342681	ATCC 49132
Agrobacterium rhizogenes	359	PRJNA247555	247555	Proteobacteria	Alphaproteobacteria	7.77453	59.8	-	JQJX01	36	7449	7175	8/28/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02787063	GCA_000745735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/735/GCA_000745735.1_ASM74573v1	-	OK036
Staphylococcus sciuri subsp. sciuri Z8	1232666	PRJNA175350	175350	Terrabacteria group	Firmicutes	2.62087	32.4	-	JANE01	107	2616	2529	4/2/14	4/2/17	Contig	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN02592623	GCA_000612145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/145/GCA_000612145.1_Z8	26205872	Z8
Rhodococcus aetherivorans	191292	PRJNA213668	213668	Terrabacteria group	Actinobacteria	6.23182	70.3431	chromosome:NZ_CM002177.1/CM002177.1; plasmid pBMC1:NZ_CM002178.1/CM002178.1; plasmid pBMC2:NZ_CM002179.1/CM002179.1	AVAE01	3	11353	11016	9/24/13	4/9/17	Chromosome	Consiglio Nazionale delle Ricerche	SAMN02470652	GCA_000470885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/885/GCA_000470885.1_RhoBCP1_1.0	24158549	BCP1
Lactobacillus acidipiscis DSM 15836	1423716	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.32608	39.1	-	AZFI01	457	2212	1992	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369424	GCA_001435755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/755/GCA_001435755.1_ASM143575v1	26415554	DSM 15836
Corynebacterium glutamicum ZL-6	1232384	PRJNA175239	175239	Terrabacteria group	Actinobacteria	3.33246	54.3	chromosome:NZ_CP004062.1/CP004062.1	-	1	3160	2896	7/11/16	4/5/17	Complete Genome	"Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences"	SAMN05366915	GCA_001683115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/115/GCA_001683115.1_ASM168311v1	-	ZL-6
Lactobacillus pentosus KCA1	1136177	PRJNA81575	81575	Terrabacteria group	Firmicutes	3.42632	46.4	chromosome:NZ_CM001538.1/CM001538.1	AKAO01	1	6176	5925	6/20/12	4/7/17	Chromosome	CMBI	SAMN02469614	GCA_000271445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/445/GCA_000271445.1_KCA1_v9	23527145	KCA1
Corynebacterium glutamicum	1718	PRJDB4751	327353	Terrabacteria group	Actinobacteria	3.29799	54.3	chromosome:AP017557.2	-	1	3093	3015	6/29/16	6/17/17	Complete Genome	"AJINOMOTO Co., Inc."	SAMD00051291	GCA_002355675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/675/GCA_002355675.1_ASM235567v1	-	AJ1511
Lelliottia amnigena	61646	PRJNA321610	321610	Proteobacteria	Gammaproteobacteria	4.61612	54.3	chromosome:NZ_CP015774.2/CP015774.2	-	1	4413	4207	5/26/16	6/14/17	Complete Genome	HZAU	SAMN05000913	GCA_001652505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/505/GCA_001652505.2_ASM165250v2	-	ZB04
Neisseria elongata subsp. glycolytica ATCC 29315	546263	PRJNA247711	247711	Proteobacteria	Betaproteobacteria	2.25665	54.3	chromosome:NZ_CP007726.1/CP007726.1	-	1	2307	2123	1/14/15	4/10/17	Complete Genome	INRS-Institut Armand Frappier	SAMN02797820	GCA_000818035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/035/GCA_000818035.1_ASM81803v1	26162030	ATCC 29315
Herminiimonas arsenicoxydans	204773	PRJNA13467	13467	Proteobacteria	Betaproteobacteria	3.42431	54.3	chromosome:NC_009138.1/CU207211.1	-	1	3274	3186	3/13/07	4/17/17	Complete Genome	Genoscope	SAMEA3138226	GCA_000026125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/125/GCA_000026125.1_ASM2612v1	17432936	-
Bacillus methanolicus MGA3	796606	PRJNA49595	49595	Terrabacteria group	Firmicutes	3.39899	38.5324	plasmid pBM19:NZ_ADWW01000011.1/ADWW01000011.1; plasmid pBM69:NZ_ADWW01000012.1/ADWW01000012.1	ADWW01	12	3437	3151	5/14/12	4/7/17	Contig	SINTEF Materials and Chemistry	SAMN02470993	GCA_000262735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/735/GCA_000262735.1_ASM26273v1	22610424	MGA3
Mycoplasma yeatsii 13926	1188240	PRJNA164763	164763	Terrabacteria group	Tenericutes	0.896612	25.8	-	AORK01	57	773	701	4/23/13	4/8/17	Contig	EVOLMYCO	SAMN02471343	GCA_000380285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/285/GCA_000380285.1_version_1.0	23766401	13926
Corynebacterium glutamicum	1718	PRJNA305665	305665	Terrabacteria group	Actinobacteria	3.30095	54.2988	chromosome:NZ_CP016335.1/CP016335.1; plasmid unnamed:NZ_CP016336.1/CP016336.1	-	2	3111	2886	7/20/16	5/1/17	Complete Genome	Shanghai Institutes for Biological Sciences (SIBS) of Chinese Academy of Sciences (CAS)	SAMN04331495	GCA_001687645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/645/GCA_001687645.1_ASM168764v1	28198668	ATCC 13869
Corynebacterium glutamicum	1718	PRJNA288848	288848	Terrabacteria group	Actinobacteria	3.34734	54.2987	chromosome:NZ_CP012194.1/CP012194.1; plasmid unnamed:NZ_CP012412.2/CP012412.2	-	2	3159	2907	11/24/15	4/6/17	Complete Genome	"Tianjin university of science and technology, Metabolic Engineering Laboratory, College of Biotechnology"	SAMN03839052	GCA_001447865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/447/865/GCA_001447865.2_ASM144786v2	-	CP
Xanthomonas sacchari NCPPB 4393	1084662	PRJNA73027	73027	Proteobacteria	Gammaproteobacteria	4.89838	69	-	AGDB01	470	4274	3971	9/15/11	6/15/17	Contig	The University of Exeter	SAMN02471171	GCA_000225975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/975/GCA_000225975.2_ASM22597v2	24710305	NCPPB 4393
Bacteroides faecis MAJ27	1077285	PRJEB16568	349824	FCB group	Bacteroidetes/Chlorobi group	5.95937	42.4	-	FNNN01	76	4730	4500	10/22/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444400	GCA_900106755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/755/GCA_900106755.1_IMG-taxon_2693429916_annotated_assembly	-	MAJ27
Nitrospirillum amazonense Y2	1003237	PRJNA65263	65263	Proteobacteria	Alphaproteobacteria	6.31841	66.6	-	AFBX01	1014	5921	5063	9/15/11	5/19/17	Contig	LNCC	SAMN02470253	GCA_000225995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/995/GCA_000225995.2_ASM22599v1	21838888	Y2
Xanthomonas alfalfae subsp. alfalfae CFBP 3836	1365647	PRJNA212245	212245	Proteobacteria	Gammaproteobacteria	5.07943	64.7565	chromosome:NZ_CM002261.1/CM002261.1; plasmid unnamed1:NZ_CM002262.1/CM002262.1; plasmid unnamed2:NZ_CM002263.1/CM002263.1	AUWN01	6	4523	4193	10/30/13	4/9/17	Chromosome	INRA	SAMN02469938	GCA_000488955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/955/GCA_000488955.1_Xaf-CFBP3836-G1	24336373	CFBP 3836
Corynebacterium glutamicum	1718	PRJNA354848	354848	Terrabacteria group	Actinobacteria	3.33809	54.2985	chromosome:NZ_CP018175.1/CP018175.1; plasmid unnamed:NZ_CP018174.1/CP018174.1	-	2	3161	2891	1/5/17	4/6/17	Complete Genome	Tianjin university of science and technology	SAMN06052514	GCA_001936195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/195/GCA_001936195.1_ASM193619v1	-	XV
Acetobacter tropicalis NBRC 101654	749388	PRJDA46891	46891	Proteobacteria	Alphaproteobacteria	3.71854	55.5	-	BABS01	773	3316	3083	6/28/11	4/7/17	Contig	Yamaguchi University	SAMD00015735	GCA_000225485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/485/GCA_000225485.1_ASM22548v1	21554859	NBRC 101654
Gordonia alkanivorans s104	1095773	PRJEB4720	232834	Terrabacteria group	Actinobacteria	5.18058	67.4	-	CBVP01	124	4752	4289	1/7/14	4/9/17	Scaffold	DLUT	SAMEA3138862	GCA_000529675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/675/GCA_000529675.1_Gordonia_alkanivorans_S104	-	s104
Corynebacterium glutamicum	1718	PRJNA271130	271130	Terrabacteria group	Actinobacteria	3.22931	54.2777	chromosome:NZ_CP010451.1/CP010451.1; plasmid unnamed:NZ_CP010452.1/CP010452.1	-	2	3029	2813	1/20/15	4/3/17	Complete Genome	"Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences"	SAMN03273898	GCA_000828015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/015/GCA_000828015.1_ASM82801v1	25953304	B253
Vibrio nigripulchritudo MADA3029	1238444	PRJEB557	182602	Proteobacteria	Gammaproteobacteria	6.30293	45.7	-	CANZ01	2	5708	5607	10/1/13	4/2/17	Scaffold	Genoscope CEA	SAMEA3139032	GCA_000723485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/485/GCA_000723485.1_ASP_PRJEB557_v1	23739050	MADA3029
Mycobacterium canettii CIPT 140070010	1205674	PRJEB92	184389	Terrabacteria group	Actinobacteria	4.52595	65.5	chromosome:NC_019951.1/FO203509.1	-	1	4321	3957	12/19/12	5/19/17	Chromosome	Genoscope CEA	SAMEA2271950	GCA_000328785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/785/GCA_000328785.1_ASM32878v1	23291586	CIPT 140070010
Borreliella bissettii	64897	PRJNA246615	246615	Spirochaetes	Spirochaetia	1.82951	28.5	-	JNBW01	736	1905	1400	11/28/16	4/16/17	Scaffold	Louisiana State University	SAMN02768837	GCA_001887175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/175/GCA_001887175.1_ASM188717v1	26419825	CO275
Paenibacillus riograndensis SBR5	1073571	PRJNA71317	71317	Terrabacteria group	Firmicutes	7.40722	51.4	-	AGBD01	1976	6651	5792	8/31/11	5/19/17	Contig	UFRGS	SAMN02471384	GCA_000224945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/945/GCA_000224945.2_PR_1	-	SBR5
Advenella mimigardefordensis DPN7	1247726	PRJNA178261	178261	Proteobacteria	Betaproteobacteria	4.76413	54.2574	chromosome:NZ_CP003915.1/CP003915.1; plasmid 24p:NZ_CP003916.1/CP003916.1	-	2	4414	4276	1/22/14	4/17/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02641504	GCA_000521505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/505/GCA_000521505.1_ASM52150v1	24739217	DPN7
Mycobacterium africanum	33894	PRJNA311193	311193	Terrabacteria group	Actinobacteria	4.4935	65.1	chromosome:NZ_CP014617.1/CP014617.1	-	1	4233	4009	3/16/16	4/5/17	Chromosome	Alianza científico - tecnológica Nucleosensor-TB	SAMN04479830	GCA_001593225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/225/GCA_001593225.1_ASM159322v1	27257203	UT307
Neisseria weaveri LMG 5135	1051985	PRJNA68581	68581	Proteobacteria	Betaproteobacteria	2.18337	49	-	AFWQ01	46	2077	1999	8/22/11	4/7/17	Contig	Seoul National University	SAMN02470907	GCA_000224255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/255/GCA_000224255.2_ASM22425v1	22188430	LMG 5135
Weissella koreensis KCTC 3621	1123721	PRJNA77667	77667	Terrabacteria group	Firmicutes	1.72894	35.5	-	AKGG01	17	1723	1623	7/10/12	4/7/17	Contig	Chunlab Inc	SAMN02469598	GCA_000277645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/645/GCA_000277645.1_ASM27764v1	23012287	KCTC 3621
Helicobacter bizzozeronii CCUG 35545	1002805	PRJEA65021	65021	Proteobacteria	delta/epsilon subdivisions	1.77563	45.8	-	CAGP01	147	1896	1204	2/10/12	8/8/17	Contig	"University of Helsinki, Faculty of Veterinary Medicine"	SAMEA2272226	GCA_000263275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/275/GCA_000263275.1_Helicobacter_bizzozeronii_CCUG_35545	-	CCUG 35545
Marinobacterium stanieri S30	1042375	PRJNA67839	67839	Proteobacteria	Gammaproteobacteria	4.37069	55.9	-	AFPL01	58	4092	3984	7/12/11	5/19/17	Contig	Korea Ocean Research & Development Institute	SAMN02470153	GCA_000220545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/545/GCA_000220545.2_ASM22054v2	22328757	S30
Mesoflavibacter zeaxanthinifaciens S86	1004149	PRJNA65289	65289	FCB group	Bacteroidetes/Chlorobi group	3.70466	37.1	-	AFOE01	61	3239	3144	7/13/11	4/7/17	Contig	Korea Ocean Research and Development Institute	SAMN02470158	GCA_000220585.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/585/GCA_000220585.2_ASM22058v2	21914876	S86
Brevibacillus laterosporus DSM 25	1121121	PRJNA174177	174177	Terrabacteria group	Firmicutes	5.27801	40.5	-	ARFS01	69	4886	4527	4/19/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440440	GCA_000374385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/385/GCA_000374385.1_ASM37438v1	-	DSM 25
Mycobacterium colombiense	339268	PRJEB19244	369368	Terrabacteria group	Actinobacteria	5.85375	67.5	-	FUEH01	14	5752	5119	2/1/17	4/6/17	Scaffold	URMITE	SAMEA59602168	GCA_900161855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/161/855/GCA_900161855.1_PRJEB19244	-	CSURP297
Streptococcus pasteurianus	197614	PRJNA272097	272097	Terrabacteria group	Firmicutes	2.21057	37.4	-	LSRA01	76	2233	2018	2/18/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN03956210	GCA_001563585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/585/GCA_001563585.1_ASM156358v1	-	GED7275A
Haemophilus pittmaniae HK 85	1035188	PRJNA67189	67189	Proteobacteria	Gammaproteobacteria	2.18261	42.5	-	AFUV01	26	2119	1589	8/10/11	8/8/17	Contig	J. Craig Venter Institute	SAMN00621708	GCA_000223275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/223/275/GCA_000223275.2_ASM22327v1	-	HK 85
[Propionibacterium] humerusii HL044PA1	765109	PRJNA49253	49253	Terrabacteria group	Actinobacteria	2.64386	60	-	ADZU01	27	2683	2496	7/28/10	4/6/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189218	GCA_000144085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/085/GCA_000144085.1_ASM14408v1	-	HL044PA1
Mycoplasma columbinum SF7	1037410	PRJNA67465	67465	Terrabacteria group	Tenericutes	0.74821	26.9	-	AFXA01	15	640	587	8/8/11	4/7/17	Contig	Huazhong Agricultural University	SAMN02469897	GCA_000222995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/995/GCA_000222995.2_ASM22299v1	23599295	SF7
Lactobacillus kefiranofaciens subsp. kefirgranum DSM 10550 = JCM 8572	1423828	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.08578	37.5	-	AZEM01	138	2078	1812	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369454	GCA_001434195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/195/GCA_001434195.1_ASM143419v1	26415554	DSM 10550
Halorhabdus tiamatea SARL4B	1033806	PRJNA66979	66979	Euryarchaeota	Halobacteria	3.14656	62.5	-	AFNT02	72	3187	2990	6/7/11	3/29/17	Contig	King Abdullah University of Science and Technology (KAUS)	SAMN02472187	GCA_000215915.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/915/GCA_000215915.3_HLRTI_V2	"2,170,559,324,324,760"	SARL4B
Cedecea neteri	158822	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.4693	54.2162	chromosome:CP023525.1; plasmid unnamed:CP023526.1	-	2	5208	4970	9/28/17	9/28/17	Complete Genome	US Food and Drug Administration 	SAMN07312436	GCA_002393445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/445/GCA_002393445.1_ASM239344v1	-	FDAARGOS_392
Haemophilus haemolyticus M21127	1028804	PRJNA66575	66575	Proteobacteria	Gammaproteobacteria	1.94562	38.6	-	AFQP01	38	1933	1754	7/29/11	3/30/17	Contig	"Meningitis and Vaccine Preventable Diseases Branch, Centers for Disease Control and Prevention"	SAMN02952885	GCA_000222045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/045/GCA_000222045.2_ASM22204v2	21952546	M21127
Halomonas sp. KO116	1504981	PRJNA251422	251422	Proteobacteria	Gammaproteobacteria	5.16836	54.2034	chromosome:NZ_CP011052.1/CP011052.1; plasmid unnamed1:NZ_CP011053.1/CP011053.1; plasmid unnamed2:NZ_CP011054.1/CP011054.1	-	3	4860	4584	3/24/15	4/10/17	Complete Genome	Oak Ridge National Lab	SAMN02821277	GCA_000734975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/734/975/GCA_000734975.2_ASM73497v2	25953187	KO116
Paenibacillus elgii	189691	PRJNA308267	308267	Terrabacteria group	Firmicutes	7.77403	53.5	-	LQRA01	131	7050	6832	4/13/16	4/12/17	Contig	University of Malaya	SAMN04390166	GCA_001619725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/725/GCA_001619725.1_ASM161972v1	-	M63
Prevotella maculosa OT 289	999422	PRJNA64895	64895	FCB group	Bacteroidetes/Chlorobi group	3.15121	47.7	-	AGEK01	21	2535	2421	1/12/12	4/7/17	Scaffold	Broad Institute	SAMN02463943	GCA_000243015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/015/GCA_000243015.1_Prev_macu_OT_289_V1	-	OT 289
Gallibacterium anatis DSM 16844 = F 149	1121910	PRJNA165393	165393	Proteobacteria	Gammaproteobacteria	2.43627	40	-	ARBQ01	103	2393	2225	4/22/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02256443	GCA_000379785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/785/GCA_000379785.1_ASM37978v1	-	DSM 16844
Photobacterium leiognathi subsp. mandapamensis svers.1.1.	1001530	PRJDA64795	64795	Proteobacteria	Gammaproteobacteria	4.59892	41.1	-	BACE01	11	4084	3966	3/30/11	5/19/17	Scaffold	University of Miyazaki	SAMD00036551	GCA_000211495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/211/495/GCA_000211495.1_ASM21149v1	21478348	svers.1.1.
Leptospira licerasiae serovar Varillal str. MMD0835	996808	PRJNA63823	63823	Spirochaetes	Spirochaetia	4.19881	41.1	-	AFLO01	48	3930	3867	6/7/11	5/18/17	Contig	J. Craig Venter Institute	SAMN00254368	GCA_000216455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/455/GCA_000216455.2_CLC_glsol186	-	MMD0835
Lelliottia sp. PFL01	1907578	PRJNA347521	347521	Proteobacteria	Gammaproteobacteria	4.60333	54.2	chromosome:NZ_CP018628.1/CP018628.1	-	1	4449	4243	8/28/17	8/30/17	Complete Genome	Kyung Hee university	SAMN05891786	GCA_002271215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/215/GCA_002271215.1_ASM227121v1	-	PFL01
Leptospira noguchii str. 2006001870	1001593	PRJNA65053	65053	Spirochaetes	Spirochaetia	4.81397	35.5	-	AFLY02	84	4394	3896	6/7/11	5/19/17	Contig	J. Craig Venter Institute	SAMN02436466	GCA_000216255.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/255/GCA_000216255.3_gls454041v02	-	2006001870
Leptospira weilii str. 2006001853	1001589	PRJNA65047	65047	Spirochaetes	Spirochaetia	4.37003	40.9	-	AFLV02	84	4400	4018	6/7/11	5/19/17	Contig	J. Craig Venter Institute	SAMN02436335	GCA_000216315.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/315/GCA_000216315.3_gls454036v02	-	2006001853
Parabacteroides goldsteinii CL02T12C30	999418	PRJNA64887	64887	FCB group	Bacteroidetes/Chlorobi group	6.70821	43.5	-	AGZO01	14	5431	5219	10/19/12	6/12/17	Scaffold	Broad Institute	SAMN02463939	GCA_000307395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/395/GCA_000307395.1_Para_gold_CL02T12C30_V1	-	CL02T12C30
Eggerthia catenaformis OT 569 = DSM 20559	999415	PRJNA185584	185584	Terrabacteria group	Firmicutes	1.92101	32.1	-	AUGJ01	37	1944	1801	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440847	GCA_000422605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/605/GCA_000422605.1_ASM42260v1	-	DSM 20559
Bacteroides nordii WAL 11050 = JCM 12987	1203608	PRJDB566	243145	FCB group	Bacteroidetes/Chlorobi group	5.59155	40.6	-	BAJA01	118	4433	3416	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00003702	GCA_000613465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/465/GCA_000613465.1_ASM61346v1	-	JCM 12987
Bacteroides salyersiae CL02T12C01	997887	PRJNA64829	64829	FCB group	Bacteroidetes/Chlorobi group	5.81576	42.1	-	AGXV01	7	4665	4443	6/25/12	5/18/17	Scaffold	Broad Institute	SAMN02463930	GCA_000273235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/235/GCA_000273235.1_Bact_saly_CL02T12C01_V1	-	CL02T12C01
Sporosarcina newyorkensis	759851	PRJEB19596	376341	Terrabacteria group	Firmicutes	3.60222	42	-	FUYJ01	16	3588	3475	3/4/17	3/11/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04244570	GCA_900167515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/515/GCA_900167515.1_IMG-taxon_2596583703_annotated_assembly	-	DSM 23966
Thermococcus pacificus	71998	PRJNA274230	274230	Euryarchaeota	Thermococci	1.78567	54.2	chromosome:NZ_CP015102.1/CP015102.1	-	1	1968	1868	7/5/17	7/7/17	Complete Genome	Ecole Normale Superieure de Lyon	SAMN03324161	GCA_002214485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/485/GCA_002214485.1_ASM221448v1	-	P-4
Methyloversatilis universalis EHg5	999628	PRJNA78015	78015	Proteobacteria	Betaproteobacteria	4.08857	66.5	-	AQZM01	2	3748	3646	4/22/13	6/20/17	Scaffold	JGI	SAMN02261291	GCA_000378945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/945/GCA_000378945.1_ASM37894v1	-	EHg5
Acidovorax radicis N35v	999394	PRJNA64471	64471	Proteobacteria	Betaproteobacteria	5.53009	64.9	-	AFBH01	33	5063	4910	4/13/11	5/18/17	Contig	"Helmholtz Zentrum Muenchen, Department Microbe-Plant Interactions"	SAMN02469889	GCA_000204215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/215/GCA_000204215.2_ASM20421v2	-	N35v
[Brevibacterium] flavum ZL-1	1232385	PRJNA175240	175240	Terrabacteria group	Actinobacteria	3.34094	54.2	chromosome:NZ_CP004046.1/CP004046.1	-	1	3171	2879	7/11/16	4/13/17	Complete Genome	"Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences"	SAMN05366914	GCA_001683055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/055/GCA_001683055.1_ASM168305v1	-	ZL-1
Pirellula sp. SH-Sr6A	1632865	PRJNA277747	277747	PVC group	Planctomycetes	6.53414	54.2	chromosome:CP011272.1	-	1	5420	5328	4/5/16	4/5/16	Complete Genome	NIOO-KNAW	SAMN03417851	GCA_001610875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/875/GCA_001610875.1_ASM161087v1	-	SH-Sr6A
Acidiphilium multivorum AIU301	926570	PRJDB503	174854	Proteobacteria	Alphaproteobacteria	3.97809	66.9	-	BANA01	1044	3835	3442	3/20/15	4/10/17	Scaffold	Kinki University	SAMD00036636	GCA_000964345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/345/GCA_000964345.1_ASM96434v1	-	AIU301
Novosphingobium nitrogenifigens DSM 19370	983920	PRJNA169729	169729	Proteobacteria	Alphaproteobacteria	4.14897	64	-	AQWK01	48	3766	3652	4/20/13	5/19/17	Contig	DOE Joint Genome Institute	SAMN02441732	GCA_000375445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/445/GCA_000375445.1_ASM37544v1	-	DSM 19370
Terriglobus roseus	392734	PRJEB15813	347776	Acidobacteria	Acidobacteriia	4.85207	56.5	chromosome I:NZ_LT629690.1/LT629690.1	-	1	4079	3986	10/20/16	4/13/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05444167	GCA_900102185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/185/GCA_900102185.1_IMG-taxon_2690315654_annotated_assembly	-	GAS232
Vibrio rotiferianus	190895	PRJDB3039	271954	Proteobacteria	Gammaproteobacteria	5.61227	44.7	-	BBLC01	964	5281	5075	1/7/15	4/10/17	Scaffold	University of Miyazaki	SAMD00019143	GCA_000818415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/415/GCA_000818415.1_ASM81841v1	25527835	Oz08
Corynebacterium glutamicum MB001	1310161	PRJNA194154	194154	Terrabacteria group	Actinobacteria	3.07925	54.2	chromosome:NC_022040.1/CP005959.1	-	1	2905	2781	8/8/13	4/1/17	Complete Genome	"CeBiTec, Bielefeld University"	SAMN02603059	GCA_000445015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/015/GCA_000445015.1_ASM44501v1	23892752	MB001
Rubrivivax benzoatilyticus JA2 = ATCC BAA-35	987059	PRJNA183033	183033	Proteobacteria	Betaproteobacteria	4.16007	71.6	-	ATUI01	58	3836	3726	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02440917	GCA_000420125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/125/GCA_000420125.1_ASM42012v1	-	JA2
Janthinobacterium sp. Marseille	375286	PRJNA16549	16549	Proteobacteria	Betaproteobacteria	4.11025	54.2	chromosome:NC_009659.1/CP000269.1	-	1	3870	3785	7/6/07	5/18/17	Complete Genome	"Information Genomique et Structurale, CNRS UPR2589"	SAMN02603336	GCA_000013625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/625/GCA_000013625.1_ASM1362v1	17722982	Marseille
Microbacterium testaceum	2033	PRJNA278182	278182	Terrabacteria group	Actinobacteria	3.94217	69.9	-	LDRR01	305	3672	3494	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401346	GCA_001476275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/275/GCA_001476275.1_ASM147627v1	26793183	NS183
Vibrio sinaloensis	379097	PRJNA264124	264124	Proteobacteria	Gammaproteobacteria	4.56509	46.2	-	JRWP01	100	4183	4072	11/13/14	4/9/17	Contig	University of Malaya	SAMN03113151	GCA_000775725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/725/GCA_000775725.1_ASM77572v1	-	T08
Verrucosispora maris	1003110	PRJNA238534	238534	Terrabacteria group	Actinobacteria	6.67395	70.9	-	LMWI01	2	5979	5778	1/7/16	4/11/17	Contig	University of Illinois	SAMN03327480	GCA_001507315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/315/GCA_001507315.1_ASM150731v1	-	NRRL B-24793
Bartonella clarridgeiae ATCC 51734	1408425	PRJNA223113	223113	Proteobacteria	Alphaproteobacteria	1.49259	35.7	-	JADC01	17	1275	1170	1/10/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02585005	GCA_000518185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/185/GCA_000518185.1_ASM51818v1	-	ATCC 51734
Enterobacter mori	539813	PRJNA386094	386094	Proteobacteria	Gammaproteobacteria	4.96013	55.2	-	NFZM01	159	4829	4585	7/24/17	7/28/17	Scaffold	"Austrian Agency for Health and Food Safety, Vienna, Austria"	SAMN06925306	GCA_002224165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/165/GCA_002224165.1_ASM222416v1	-	800721-17
Avibacterium paragallinarum 72	948565	PRJNA64665	64665	Proteobacteria	Gammaproteobacteria	2.45349	40.8	-	AFFP02	75	2394	2244	7/28/11	4/8/17	Contig	"Laboratory FARVET, Peru"	SAMN02470228	GCA_000221945.4	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/945/GCA_000221945.4_ASM22194v4	23861570	72
Geobacter uraniireducens Rf4	351605	PRJNA15768	15768	Proteobacteria	delta/epsilon subdivisions	5.13636	54.2	chromosome:NC_009483.1/CP000698.1	-	1	4592	4420	5/11/07	5/18/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598352	GCA_000016745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/745/GCA_000016745.1_ASM1674v1	-	Rf4
Magnetococcus marinus MC-1	156889	PRJNA262	262	Proteobacteria	Alphaproteobacteria	4.71958	54.2	chromosome:NC_008576.1/CP000471.1	-	1	3917	3766	11/8/06	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598452	GCA_000014865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/865/GCA_000014865.1_ASM1486v1	22581902	MC-1
Lactobacillus fructivorans KCTC 3543 = DSM 20203	941770	PRJNA61453	61453	Terrabacteria group	Firmicutes	1.37333	38.9	-	AEQY01	5	1366	1293	1/5/11	4/7/17	Scaffold	Korea Research Institute of Bioscience and Biotechnology (KRIBB)	SAMN02470196	GCA_000185465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/465/GCA_000185465.1_ASM18546v1	22461550	KCTC 3543
Acidithiobacillus ferrivorans	160808	PRJEB5721	248814	Proteobacteria	Acidithiobacillia	3.45611	56.5108	chromosome AFERRI:NZ_LT841305.1/LT841305.1; plasmid AFERRIp:NZ_LT841306.1/LT841306.1	-	2	3555	3296	4/22/17	5/1/17	Chromosome	Genoscope CEA	SAMEA100981168	GCA_900174455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/455/GCA_900174455.1_NEW_PRJEB5721	-	-
Planococcus donghaensis MPA1U2	933115	PRJNA60823	60823	Terrabacteria group	Firmicutes	3.30346	39.7	-	AEPB01	65	3253	3159	2/14/11	4/7/17	Contig	UCSC	SAMN02471613	GCA_000189395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/395/GCA_000189395.2_ASM18939v1	21994932	MPA1U2
Kytococcus sedentarius	1276	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.37164	66.4	-	JWDO01	104	2059	1934	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197046	GCA_001061885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/885/GCA_001061885.1_ASM106188v1	26230489	1083_KSED
Acetobacter pomorum	65959	PRJNA252093	252093	Proteobacteria	Alphaproteobacteria	2.84388	52.4	-	JOKL01	127	2688	2544	9/18/14	4/9/17	Contig	Cornell University	SAMN02849413	GCA_000755675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/675/GCA_000755675.1_ASM75567v1	-	DmCS_004
Lactobacillus farciminis KCTC 3681 = DSM 20184	936140	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.48084	36.4	-	AZDR01	76	2427	2352	11/6/15	4/11/17	Contig	Shanghai Majorbio	SAMN02369427	GCA_001434775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/775/GCA_001434775.1_ASM143477v1	26415554	DSM 20184
Pedobacter heparinus DSM 2366	485917	PRJNA196344	196344	FCB group	Bacteroidetes/Chlorobi group	5.17153	42.1	-	AQGK01	3	4307	4206	6/13/13	4/8/17	Contig	Pacific Biosciences	SAMN01909281	GCA_000410815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/815/GCA_000410815.1_Pedobacter_heparinus_DSM_2366_HGAP_Assembly	-	DSM 2366
Synechococcus sp. CC9902	316279	PRJNA13655	13655	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.23483	54.2	chromosome:NC_007513.1/CP000097.1	-	1	2401	2337	10/26/05	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02598312	GCA_000012505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/505/GCA_000012505.1_ASM1250v1	-	CC9902
Saccharomonospora viridis	1852	PRJNA260873	260873	Terrabacteria group	Actinobacteria	4.30435	67.4	-	JRZE01	13	3938	3831	11/26/14	4/10/17	Contig	Korea University	SAMN03049695	GCA_000787535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/535/GCA_000787535.1_ASM78753v1	-	JCM 3315
Geodermatophilus obscurus	1861	PRJEB17187	351300	Terrabacteria group	Actinobacteria	4.95992	75.3	-	FOWE01	22	4731	4528	10/30/16	4/14/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660359	GCA_900115395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/395/GCA_900115395.1_IMG-taxon_2599185183_annotated_assembly	-	DSM 43161
Halogeometricum borinquense DSM 11551	469382	PRJNA174948	174948	Euryarchaeota	Halobacteria	3.92851	59.9	-	AOHT01	56	3889	3752	2/4/13	4/10/17	Contig	"University of California, Davis"	SAMN02471667	GCA_000337855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/855/GCA_000337855.1_ASM33785v1	25393412	DSM 11551
Corynebacterium glutamicum	1718	PRJNA246675	246675	Terrabacteria group	Actinobacteria	3.19289	54.1853	chromosome:NZ_CP007722.1/CP007722.1; plasmid unnamed:NZ_CP007723.1/CP007723.1	-	2	3027	2822	8/21/14	4/2/17	Complete Genome	KAIST	SAMN02786782	GCA_000742715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/715/GCA_000742715.1_ASM74271v1	-	ATCC 21831
Leuconostoc pseudomesenteroides 4882	1154757	PRJNA84285	84285	Terrabacteria group	Firmicutes	2.00859	39.1	-	CAKV01	106	2124	1844	7/24/12	4/8/17	Contig	INRA Jouy-en-Josas	SAMEA3138421	GCA_000297375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/375/GCA_000297375.1_ASM29737v1	-	4882
Corynebacterium glutamicum ATCC 14067	1079988	PRJNA391564	391564	Terrabacteria group	Actinobacteria	3.3299	54.1	chromosome:NZ_CP022614.1/CP022614.1	-	1	3222	2998	8/8/17	8/14/17	Complete Genome	South China University of Technology	SAMN07270561	GCA_002243555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/555/GCA_002243555.1_ASM224355v1	-	ATCC 14067
Cellulomonas flavigena	1711	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.35432	66.5	-	JVEY01	58	2040	1923	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197686	GCA_001057055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/055/GCA_001057055.1_ASM105705v1	26230489	493_CFLA
Meiothermus ruber DSM 1279	504728	PRJNA196343	196343	Terrabacteria group	Deinococcus-Thermus	3.09888	63.4	chromosome:NC_021081.1/CP005385.1	-	1	3099	3015	4/22/13	5/19/17	Chromosome	Pacific Biosciences	SAMN01909280	GCA_000376665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/665/GCA_000376665.1_ASM37666v1	-	DSM 1279
Corynebacterium glutamicum	1718	PRJNA316484	316484	Terrabacteria group	Actinobacteria	3.3421	54.1	chromosome:NZ_CP014984.1/CP014984.1	-	1	3230	3003	5/13/16	4/5/17	Complete Genome	Tianjin university of science and technology	SAMN04581265	GCA_001643035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/035/GCA_001643035.1_ASM164303v1	-	YI
Streptosporangium roseum	2001	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.1686	70.6	-	JOEP01	307	9241	8678	7/15/14	4/9/17	Scaffold	University of Illinois	SAMN02645241	GCA_000725815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/815/GCA_000725815.1_Doro.v1.0	-	NRRL B-2638
Xylanimonas cellulosilytica	186189	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.45721	65.5	-	JVKM01	64	2147	2029	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197542	GCA_001072465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/465/GCA_001072465.1_ASM107246v1	26230489	352_XCEL
Sanguibacter keddieii	60920	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.35761	65.4	-	JVOJ01	61	2039	1890	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197441	GCA_001064145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/145/GCA_001064145.1_ASM106414v1	26230489	250_SKED
Fructobacillus fructosus KCTC 3544	930946	PRJNA60495	60495	Terrabacteria group	Firmicutes	1.47491	44.6	-	AEOP01	57	1523	1447	1/5/11	4/7/17	Contig	Korea Research Institute of Bioscience and Biotechnology	SAMN02470190	GCA_000185045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/045/GCA_000185045.2_ASM18504v1	-	KCTC 3544
[Brevibacterium] flavum	92706	PRJNA279429	279429	Terrabacteria group	Actinobacteria	3.3387	54.1	chromosome:NZ_CP011309.1/CP011309.1	-	1	3226	3025	5/4/15	4/10/17	Complete Genome	KRIBB	SAMN03494310	GCA_000987865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/987/865/GCA_000987865.1_ASM98786v1	-	ATCC 15168
Marinobacter sp. BSs20148	490759	PRJNA170720	170720	Proteobacteria	Gammaproteobacteria	4.06386	54.1	chromosome:NC_018268.1/CP003735.1	-	1	3782	3593	8/2/12	4/17/17	Complete Genome	"CAS Key Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences"	SAMN02603049	GCA_000283275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/275/GCA_000283275.1_ASM28327v1	23682144	BSs20148
Streptobacillus moniliformis	34105	PRJNA319313	319313	Fusobacteria	Fusobacteriia	1.63672	26.2	-	LWQW01	172	1510	1398	6/3/16	4/5/17	Contig	Robert Koch Institute	SAMN04884929	GCA_001655815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/815/GCA_001655815.1_ASM165581v1	-	ATCC 27747
Aeromonas caviae Ae398	878320	PRJEA51677	51677	Proteobacteria	Gammaproteobacteria	4.43922	61.4	-	CACP01	149	4138	3960	11/23/10	5/18/17	Contig	The University of Queensland	SAMEA2272404	GCA_000208825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/208/825/GCA_000208825.1_ASM20882v1	21183677	Ae398
Lactobacillus animalis KCTC 3501 = DSM 20602	930942	PRJNA60479	60479	Terrabacteria group	Firmicutes	1.88279	41.1	-	AEOF01	7	1819	1696	12/9/10	4/7/17	Scaffold	Korea Research Institute of Bioscience and Biotechnology (KRIBB)	SAMN02470201	GCA_000183825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/825/GCA_000183825.1_ASM18382v1	21183665	KCTC 3501
Anaerolinea thermophila	167964	PRJNA278302	278302	Terrabacteria group	Chloroflexi	1.52473	45.9	-	LGFU01	213	1503	1503	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445148	GCA_001508255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/255/GCA_001508255.1_ASM150825v1	26787827	-
Lactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001	913848	PRJNA59837	59837	Terrabacteria group	Firmicutes	2.96475	43.2	-	AELK01	55	2721	2508	11/17/10	4/7/17	Scaffold	Korea Research Institute of Bioscience and Biotechnology (KRIBB)	SAMN02470193	GCA_000166795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/795/GCA_000166795.1_ASM16679v1	21148735	KCTC 3167
Corynebacterium glutamicum R	340322	PRJDA19193	19193	Terrabacteria group	Actinobacteria	3.3633	54.0971	chromosome:NC_009342.1/AP009044.1; plasmid pCGR1:NC_009343.1/AP009045.1	-	2	3192	3005	4/5/07	3/29/17	Complete Genome	"Research Institute of Innovative Technology for the Earth (RITE), Microbiology research group"	SAMD00060924	GCA_000010225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/225/GCA_000010225.1_ASM1022v1	17379713	R
Dietzia cinnamea NBRC 102147	1223524	PRJDB449	173168	Terrabacteria group	Actinobacteria	3.59883	70.8	-	BCSW01	160	3337	3158	2/10/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046472	GCA_001571065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/065/GCA_001571065.1_ASM157106v1	-	NBRC 102147
Corynebacterium glutamicum	1718	PRJNA281531	281531	Terrabacteria group	Actinobacteria	3.29373	54.0927	chromosome:NZ_CP013991.1/CP013991.1; plasmid p48A:NZ_CP014329.1/CP014329.1	-	2	3096	2912	1/20/16	4/5/17	Complete Genome	USDA-ARS-USMARC	SAMN04158500	GCA_001518935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/935/GCA_001518935.2_ASM151893v2	-	USDA-ARS-USMARC-56828
Corynebacterium glutamicum	1718	PRJNA246675	246675	Terrabacteria group	Actinobacteria	3.16249	54.0856	chromosome:NZ_CP007724.1/CP007724.1; plasmid unnamed:NZ_CP007725.1/CP007725.1	-	2	3003	2803	8/21/14	4/2/17	Complete Genome	KAIST	SAMN02786783	GCA_000742735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/735/GCA_000742735.1_ASM74273v1	25091334	AR1
Plautia stali symbiont	891974	PRJDB3128	302136	Proteobacteria	Gammaproteobacteria	3.86954	57	-	BBNZ01	135	3890	2647	11/11/15	4/11/17	Contig	The Open University of Japan	SAMD00020668	GCA_001485275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/275/GCA_001485275.1_ASM148527v1	27571756	-
Neisseria sp. 10023	1853278	PRJNA341560	341560	Proteobacteria	Betaproteobacteria	2.49644	54	chromosome:NZ_CP022278.1/CP022278.1	-	1	2408	2242	7/10/17	7/12/17	Complete Genome	China disease prevention and control center	SAMN05726023	GCA_002216145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/145/GCA_002216145.1_ASM221614v1	-	10023
Lactobacillus oris F0423	944562	PRJNA61831	61831	Terrabacteria group	Firmicutes	2.17494	49.7	-	AFTL01	20	2109	1943	7/25/11	4/7/17	Contig	J. Craig Venter Institute	SAMN00195308	GCA_000221505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/505/GCA_000221505.2_ASM22150v2	-	F0423
Peptoniphilus harei	54005	PRJNA272121	272121	Terrabacteria group	Firmicutes	1.87437	34.3	-	LRQE01	22	1837	1753	2/2/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN03854408	GCA_001546555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/555/GCA_001546555.1_ASM154655v1	-	CMW7756A
Eremococcus coleocola ACS-139-V-Col8	908337	PRJNA54021	54021	Terrabacteria group	Firmicutes	1.77374	39	-	AENN01	21	1743	1648	11/24/10	4/7/17	Contig	J. Craig Venter Institute	SAMN00116774	GCA_000183205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/205/GCA_000183205.2_ASM18320v1	-	ACS-139-V-Col8
Methylomonas methanica	421	PRJNA315271	315271	Proteobacteria	Gammaproteobacteria	5.40723	51.3	-	LUUG01	139	4968	4766	5/16/16	4/12/17	Contig	Ghent University	SAMN04555162	GCA_001644035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/035/GCA_001644035.1_ASM164403v1	-	R-45363
Dehalogenimonas formicexedens	1839801	PRJNA319195	319195	Terrabacteria group	Chloroflexi	2.09279	54	chromosome:NZ_CP018258.1/CP018258.1	-	1	2174	2084	1/17/17	4/16/17	Complete Genome	Louisiana State University	SAMN04881314	GCA_001953175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/175/GCA_001953175.1_ASM195317v1	-	NSZ-14
Streptococcus vestibularis F0396	904306	PRJNA53573	53573	Terrabacteria group	Firmicutes	2.02229	39.6	-	AEKO01	11	2034	1769	11/4/10	4/11/17	Contig	J. Craig Venter Institute	SAMN00115117	GCA_000180075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/180/075/GCA_000180075.1_ASM18007v1	-	F0396
Kosakonia radicincitans	283686	PRJNA316511	316511	Proteobacteria	Gammaproteobacteria	5.68768	54	chromosome:NZ_CP015113.1/CP015113.1	-	1	5413	5174	11/30/16	4/16/17	Complete Genome	Shanghai Jiao Tong University	SAMN04584361	GCA_001887675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/675/GCA_001887675.1_ASM188767v1	-	GXGL-4A
Streptococcus cristatus ATCC 51100	889201	PRJNA53203	53203	Terrabacteria group	Firmicutes	1.98249	42.6	-	AEVC01	5	1958	1872	2/3/11	3/30/17	Scaffold	Baylor College of Medicine	SAMN00216974	GCA_000187855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/855/GCA_000187855.1_ASM18785v1	-	ATCC 51100
Streptococcus australis ATCC 700641	888833	PRJNA67183	67183	Terrabacteria group	Firmicutes	2.13136	42	-	AFUD01	49	2089	1900	8/4/11	4/7/17	Contig	J. Craig Venter Institute	SAMN00621699	GCA_000222745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/745/GCA_000222745.2_ASM22274v2	-	ATCC 700641
Prevotella salivae F0493	1395125	PRJNA217512	217512	FCB group	Bacteroidetes/Chlorobi group	3.09991	41.7	-	AWGW01	32	2598	2451	9/16/13	4/9/17	Contig	The J. Craig Venter Institute	SAMN02339451	GCA_000477535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/535/GCA_000477535.1_PsaliF0493v1.0	-	F0493
Streptococcus pseudopneumoniae ATCC BAA-960 = CCUG 49455	889205	PRJNA75131	75131	Terrabacteria group	Firmicutes	2.08575	39.9	-	AICS01	253	2206	2007	4/5/12	5/31/17	Contig	J. Craig Venter Institute	SAMN00761794	GCA_000257825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/825/GCA_000257825.1_ASM25782v1	-	ATCC BAA-960
Neisseria bacilliformis	267212	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	2.36094	59.8	-	JUOC01	174	2249	2137	7/10/15	4/10/17	Contig	University of Washington	SAMN03198124	GCA_001067635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/635/GCA_001067635.1_ASM106763v1	26230489	914_NLAC
Kingella denitrificans	502	PRJEB19887	379252	Proteobacteria	Betaproteobacteria	2.03083	54.6	-	FZRL01	80	2103	2002	8/4/17	8/17/17	Contig	LSHTM	SAMEA103894054	GCA_900169325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/325/GCA_900169325.1_GC77_g1	-	-
Haemophilus aegyptius	197575	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	1.85641	37.9	-	LZPG01	21	1876	1726	7/5/16	4/13/17	Scaffold	TAILORED-Treatment project	SAMN05219235	GCA_001679305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/305/GCA_001679305.1_ASM167930v1	-	CCUG 628
Enterococcus italicus DSM 15952	888064	PRJNA270385	270385	Terrabacteria group	Firmicutes	2.32221	39	-	JXKT01	120	2273	2154	11/25/16	4/14/17	Contig	Inner Mongolia Agricultural University	SAMN03267176	GCA_001885995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/995/GCA_001885995.1_ASM188599v1	-	DSM 15952
Aggregatibacter segnis	739	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.9349	42.7	-	JUNA01	38	1834	1757	7/10/15	4/10/17	Contig	University of Washington	SAMN03198152	GCA_001059425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/425/GCA_001059425.1_ASM105942v1	26230489	933_AAPH
Lachnoanaerobaculum saburreum	467210	PRJNA246510	246510	Terrabacteria group	Firmicutes	2.91922	37.6	-	LSDA01	82	2800	2611	2/8/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN04108634	GCA_001552975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/975/GCA_001552975.1_ASM155297v1	-	DNF00896
Actinomyces neuii BVS029A5	888439	PRJNA52975	52975	Terrabacteria group	Actinobacteria	2.14371	56.6	-	AGWP01	7	1965	1870	9/13/12	4/7/17	Scaffold	Broad Institute	SAMN02463915	GCA_000296485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/485/GCA_000296485.1_Acti_neui_BVS029A5_V1	-	BVS029A5
Hylemonella gracilis str. Niagara R	1458275	PRJNA237115	237115	Proteobacteria	Betaproteobacteria	3.82161	64.9	-	JEMG01	2	3514	3430	3/26/14	4/9/17	Scaffold	CUBRC	SAMN02614613	GCA_000600295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/295/GCA_000600295.1_HgNR1.0	-	Niagara R
Kosakonia oryzae	497725	PRJNA309028	309028	Proteobacteria	Gammaproteobacteria	5.30334	54	chromosome:NZ_CP014007.1/CP014007.1	-	1	5038	4829	6/6/16	4/12/17	Complete Genome	Zhejiang university	SAMN04419549	GCA_001658025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/025/GCA_001658025.1_ASM165802v1	-	Ola 51
Desulfovibrio africanus subsp. africanus DSM 2603	1121435	PRJNA188878	188878	Proteobacteria	delta/epsilon subdivisions	4.40252	61.1	-	AULZ01	41	4035	3904	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441475	GCA_000422545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/545/GCA_000422545.1_ASM42254v1	-	DSM 2603
Acetobacter aceti ATCC 23746	663932	PRJNA165291	165291	Proteobacteria	Alphaproteobacteria	3.69077	57.1	-	ARBD01	3	3401	3230	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02256453	GCA_000379545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/545/GCA_000379545.1_ASM37954v1	-	ATCC 23746
Kingella kingae ATCC 23330	887327	PRJNA52985	52985	Proteobacteria	Betaproteobacteria	1.97535	46.8	-	AFHS01	20	1986	1833	5/13/11	3/30/17	Scaffold	Baylor College of Medicine	SAMN00259690	GCA_000213535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/535/GCA_000213535.1_ASM21353v1	-	ATCC 23330
Leuconostoc lactis KCTC 3773	886872	PRJNA52539	52539	Terrabacteria group	Firmicutes	1.72068	42.9	-	AEGQ01	98	1766	1634	9/23/10	4/7/17	Contig	Korea Research Institute of Bioscience and Biotechnology (KRIBB)	SAMN02470199	GCA_000179875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/875/GCA_000179875.1_ASM17987v1	20952569	KCTC 3773
Streptococcus porcinus	1340	PRJEB16023	371377	Terrabacteria group	Firmicutes	1.93013	36.5	-	FZQN01	7	1900	1818	7/21/17	8/1/17	Contig	UNIVERSITY OF CAMBRDGE	SAMEA4506882	GCA_900108385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/385/GCA_900108385.1_SS-841	-	-
Faecalibaculum rodentium	1702221	PRJNA282363	282363	Terrabacteria group	Firmicutes	2.54249	54	chromosome:NZ_CP011391.1/CP011391.1	-	1	2470	2352	2/22/16	4/11/17	Complete Genome	Korea Research Institute Bioscience and Biotechnology	SAMN03568900	GCA_001564455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/455/GCA_001564455.1_ASM156445v1	26877770	Alo17
methanogenic archaeon ISO4-H5	1495144	PRJNA292473	292473	Euryarchaeota	Thermoplasmata	1.93788	54	chromosome:NZ_CP014214.1/CP014214.1	-	1	1866	1794	2/12/16	4/11/17	Complete Genome	AgResearch Ltd.	SAMN03976563	GCA_001560915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/915/GCA_001560915.1_ASM156091v1	-	ISO4-H5
Streptococcus parauberis NCFD 2020	873447	PRJNA51457	51457	Terrabacteria group	Firmicutes	2.16448	35.5	chromosome:NZ_AEUT02000001.1/AEUT02000001.1	AEUT02	1	2186	2056	2/4/11	3/30/17	Chromosome	JCVI	SAMN02436555	GCA_000187935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/935/GCA_000187935.2_ASM18793v2	-	NCFD 2020
Desulfotomaculum kuznetsovii	58135	PRJNA278302	278302	Terrabacteria group	Firmicutes	0.707156	45.4	-	LGGU01	51	762	762	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445175	GCA_001509075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/075/GCA_001509075.1_ASM150907v1	26787827	-
Candidatus Nitrosoarchaeum limnia SFB1	886738	PRJNA52465	52465	TACK group	Thaumarchaeota	1.77272	32.6008	chromosome:CM001158.1	AEGP01	1	4315	4076	4/18/11	3/13/15	Chromosome	Stanford University	SAMN02471010	GCA_000204585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/585/GCA_000204585.1_ASM20458v1	21364937	SFB1
Anaerophaga thermohalophila str. Valhall	1144273	PRJNA82775	82775	FCB group	Bacteroidetes/Chlorobi group	4.54321	41.4	-	AHZV01	371	3598	3272	2/28/12	5/18/17	Contig	University of Bergen	SAMN02471584	GCA_000250735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/735/GCA_000250735.2_ASM25073v2	-	Valhall
Pseudohongiella spirulinae	1249552	PRJNA301918	301918	Proteobacteria	Gammaproteobacteria	3.34512	54	chromosome:NZ_CP013189.1/CP013189.1	-	1	3089	3027	11/17/15	4/11/17	Complete Genome	Korea Research Institute of Bioscience and Biotechnology	SAMN04260401	GCA_001444425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/425/GCA_001444425.1_ASM144442v1	-	KCTC 32221
Dolosigranulum pigrum	29394	PRJNA362210	362210	Terrabacteria group	Firmicutes	2.12103	39.6	-	MUYF01	3	2054	1729	2/23/17	2/25/17	Contig	California Department of Public Health	SAMN06236401	GCA_002005795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/795/GCA_002005795.1_ASM200579v1	-	15S00348
Anaerococcus prevotii ACS-065-V-Col13	879305	PRJNA52025	52025	Terrabacteria group	Firmicutes	1.6971	33	-	AEXM01	35	1664	1569	3/7/11	4/7/17	Contig	J. Craig Venter Institute	SAMN00138207	GCA_000191725.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/725/GCA_000191725.2_ASM19172v2	-	ACS-065-V-Col13
Sphingobium yanoikuyae	13690	PRJNA255061	255061	Proteobacteria	Alphaproteobacteria	5.15786	64.6	-	JPOU01	64	4893	4673	7/28/14	4/2/17	Scaffold	Shanghai Jiao Tong University	SAMN02919261	GCA_000735675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/675/GCA_000735675.1_ASM73567v1	25657282	B1
Myroides odoratimimus CCUG 10230	883150	PRJNA52189	52189	FCB group	Bacteroidetes/Chlorobi group	4.02661	34.1	-	AGEC02	7	3608	3458	1/10/12	4/1/17	Scaffold	Broad Institute	SAMN02463909	GCA_000242075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/075/GCA_000242075.2_Myro_odor_CCUG_10230_V2	-	CCUG 10230
Enterobacteriaceae bacterium strain FGI 57	693444	PRJNA200605	200605	Proteobacteria	Gammaproteobacteria	4.76218	54	chromosome:NC_020063.1/CP003938.1	-	1	4541	4314	1/3/13	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02744036	GCA_000330845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/845/GCA_000330845.1_ASM33084v1	23469353	FGI 57
Prevotella micans F0438	883158	PRJNA52087	52087	FCB group	Bacteroidetes/Chlorobi group	2.48795	45.5	-	AGWK01	12	2042	1909	1/12/12	4/7/17	Scaffold	Broad Institute	SAMN02463881	GCA_000243035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/035/GCA_000243035.1_Prev_mica_F0438_V1	-	F0438
Enterobacter sp. R4-368	1166130	PRJNA189171	189171	Proteobacteria	Gammaproteobacteria	5.15503	53.973	chromosome:NC_021500.1/CP005991.1; plasmid unnamed:NC_021492.1/CP005992.1	-	2	4955	4739	6/11/13	12/3/16	Complete Genome	Temasek Lifesciences Laboratory	SAMN02603907	GCA_000410515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/515/GCA_000410515.1_ASM41051v1	23908287	R4-368
Sinorhizobium fredii HH103	1117943	PRJEA77863	77863	Proteobacteria	Alphaproteobacteria	7.22119	62.1695	chromosome:NC_016812.1/HE616890.1; plasmid pSfHH103a:NC_016813.1/HE616891.1; plasmid pSfHH103b:NC_016836.1/HE616892.1; plasmid pSfHH103c:NC_016814.1/HE616893.1; plasmid pSfHH103e:NC_016815.1/HE616899.1	-	10	7050	6573	12/21/11	5/19/17	Chromosome	"Center for Biotechnology, Bielefeld University, Germany"	SAMEA2272089	GCA_000283895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/895/GCA_000283895.1_ASM28389v1	22374952	HH103
Streptococcus pseudoporcinus SPIN 20026	910313	PRJNA59517	59517	Terrabacteria group	Firmicutes	2.11137	37	-	AENS01	35	2038	1937	12/1/10	4/7/17	Contig	J. Craig Venter Institute	SAMN00116778	GCA_000183465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/465/GCA_000183465.2_ASM18346v1	-	SPIN 20026
Citrobacter koseri	545	PRJNA327106	327106	Proteobacteria	Gammaproteobacteria	4.75249	53.9	chromosome:CP017665.1	-	1	-	-	1/4/17	1/4/17	Complete Genome	None	SAMN05509313	GCA_001931885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/885/GCA_001931885.1_ASM193188v1	-	-
Pantoea vagans	470934	PRJNA261094	261094	Proteobacteria	Gammaproteobacteria	4.31326	53.9	chromosome:NZ_CP011427.1/CP011427.1	-	1	4053	3884	1/7/16	5/4/17	Complete Genome	UNIVERSITY OF MALAYA	SAMN03068907	GCA_001506165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/165/GCA_001506165.1_ASM150616v1	-	ND02
Actinomyces oris K20	871541	PRJDA51265	51265	Terrabacteria group	Actinobacteria	2.87243	67.8	-	BABV01	771	2638	2118	8/10/10	3/30/17	Contig	Osaka Dental University	SAMD00036544	GCA_000180155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/180/155/GCA_000180155.1_ASM18015v1	22900599	K20
Porphyromonas asaccharolytica PR426713P-I	910312	PRJNA59515	59515	FCB group	Bacteroidetes/Chlorobi group	2.19912	52.3	-	AENO01	58	1800	1704	11/30/10	4/7/17	Contig	J. Craig Venter Institute	SAMN00116777	GCA_000183605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/605/GCA_000183605.2_ASM18360v1	-	PR426713P-I
Prevotella oralis HGA0225	1203550	PRJNA169459	169459	FCB group	Bacteroidetes/Chlorobi group	2.85737	44.5	-	ATFN01	7	2356	2255	6/21/13	4/8/17	Scaffold	Broad Institute	SAMN02596991	GCA_000413355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/355/GCA_000413355.1_Prev_oral_HGA0225_V1	-	HGA0225
Capnocytophaga ochracea F0287	873517	PRJNA51493	51493	FCB group	Bacteroidetes/Chlorobi group	2.66355	39.5	-	AEOH01	9	2309	2195	12/13/10	4/7/17	Scaffold	Baylor College of Medicine	SAMN00215988	GCA_000183985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/985/GCA_000183985.1_ASM18398v1	-	F0287
Pyrodictium delaneyi	1273541	PRJNA268702	268702	TACK group	Crenarchaeota	2.02384	53.9	chromosome:NZ_CP013011.1/CP013011.1	-	1	2082	2013	10/26/15	4/11/17	Complete Genome	Kyung Hee University	SAMN03223811	GCA_001412615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/615/GCA_001412615.1_ASM141261v1	-	Su06
Streptococcus infantis	68892	PRJNA304333	304333	Terrabacteria group	Firmicutes	2.11172	39.5966	plasmid unnamed:NZ_CM003841.1/CM003841.1	LQZF01	56	2026	1843	3/2/16	4/5/17	Scaffold	University of Kaiserslautern	SAMN04325030	GCA_001579645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/645/GCA_001579645.1_ASM157964v1	27303717	DD18
Veillonella atypica KON	1128111	PRJNA80237	80237	Terrabacteria group	Firmicutes	1.99716	39	-	AMEX01	40	1887	1804	12/10/12	4/11/17	Scaffold	Washington University	SAMN02436795	GCA_000318355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/355/GCA_000318355.2_ASM31835v2	-	KON
Pantoea rwandensis	1076550	PRJNA260768	260768	Proteobacteria	Gammaproteobacteria	4.32761	53.9	chromosome:NZ_CP009454.1/CP009454.1	-	1	4049	3886	9/29/14	4/9/17	Complete Genome	UNIVERSITY OF MALAYA	SAMN03031199	GCA_000759475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/475/GCA_000759475.1_ASM75947v1	-	ND04
Dialister microaerophilus UPII 345-E	910314	PRJNA59521	59521	Terrabacteria group	Firmicutes	1.39583	35.7	-	AENT01	32	1352	1272	12/1/10	4/7/17	Contig	J. Craig Venter Institute	SAMN00116779	GCA_000183445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/445/GCA_000183445.2_ASM18344v1	-	UPII 345-E
Prevotella marshii DSM 16973 = JCM 13450	862515	PRJDB576	243152	FCB group	Bacteroidetes/Chlorobi group	2.51816	47.4	-	BAJI01	80	2211	1829	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00009951	GCA_000613625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/625/GCA_000613625.1_ASM61362v1	-	JCM 13450
Prevotella disiens JCM 6334 = ATCC 29426	1235811	PRJNA181042	181042	FCB group	Bacteroidetes/Chlorobi group	2.69854	39.6	-	AWUY01	261	2396	2123	9/16/13	4/9/17	Scaffold	Washington University	SAMN02436748	GCA_000467875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/875/GCA_000467875.1_ASM46787v1	-	ATCC 29426
Corynebacterium glutamicum SCgG1	1232381	PRJNA175236	175236	Terrabacteria group	Actinobacteria	3.35062	53.9	chromosome:NC_021351.1/CP004047.1	-	1	3130	2983	6/3/13	4/1/17	Complete Genome	"Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences"	SAMN02603963	GCA_000404145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/145/GCA_000404145.1_ASM40414v1	-	SCgG1
Vibrio tubiashii ATCC 19109	1051646	PRJNA68625	68625	Proteobacteria	Gammaproteobacteria	5.46746	44.9	-	AFWI01	226	5191	4879	8/4/11	5/19/17	Contig	Food and Drug Administration	SAMN02951905	GCA_000222665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/665/GCA_000222665.2_ASM22266v1	21930677	ATCC 19109
Rahnella aquatilis CIP 78.65 = ATCC 33071	745277	PRJNA60227	60227	Proteobacteria	Gammaproteobacteria	5.4489	52.0762	chromosome:NC_016818.1/CP003244.1; plasmid pRahaq201:NC_016835.1/CP003245.1; plasmid pRahaq202:NC_016819.1/CP003246.1; plasmid pRahaq203:NC_017092.1/CP003247.1	-	4	5031	4831	1/10/12	5/28/17	Chromosome	JGI	SAMN02261385	GCA_000241955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/955/GCA_000241955.1_ASM24195v1	22582378	CIP 78.65
[Eubacterium] yurii	39498	PRJEB19559	376318	Terrabacteria group	Firmicutes	2.554	32.1	-	FUZS01	41	2186	2071	3/9/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745115	GCA_900167215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/215/GCA_900167215.1_IMG-taxon_2585428116_annotated_assembly	-	ATCC 43714
Haladaptatus paucihalophilus DX253	797209	PRJNA50445	50445	Euryarchaeota	Halobacteria	4.28481	61.8	-	AEMG01	32	4294	4191	1/31/11	5/18/17	Contig	Oklahoma State University	SAMN02470763	GCA_000187225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/225/GCA_000187225.2_ASM18722v1	24048226	DX253
Prevotella histicola F0411	857291	PRJNA49883	49883	FCB group	Bacteroidetes/Chlorobi group	2.99243	41.2	-	AFXP01	17	2444	2277	11/2/11	4/7/17	Scaffold	Broad Institute	SAMN02463875	GCA_000234055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/055/GCA_000234055.1_Prev_hist_F0411_V1	-	F0411
Haemophilus parainfluenzae ATCC 33392	888828	PRJNA53197	53197	Proteobacteria	Gammaproteobacteria	2.12476	39.2	-	AEWU01	10	2036	1939	3/3/11	3/30/17	Scaffold	Baylor College of Medicine	SAMN00253308	GCA_000191405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/405/GCA_000191405.1_ASM19140v1	-	ATCC 33392
Corynebacterium glutamicum SCgG2	1232383	PRJNA175241	175241	Terrabacteria group	Actinobacteria	3.35062	53.9	chromosome:NC_021352.1/CP004048.1	-	1	3129	2980	6/3/13	4/1/17	Complete Genome	"Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences"	SAMN02603964	GCA_000404185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/185/GCA_000404185.1_ASM40418v1	-	SCgG2
Thermacetogenium phaeum DSM 12270	1089553	PRJNA168373	168373	Terrabacteria group	Firmicutes	2.93906	53.9	chromosome:NC_018870.1/CP003732.1	-	1	2923	2773	10/17/12	4/8/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02603274	GCA_000305935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/935/GCA_000305935.1_ASM30593v1	23259483	DSM 12270
Nitratifractor salsuginis DSM 16511	749222	PRJNA46883	46883	Proteobacteria	delta/epsilon subdivisions	2.10128	53.9	chromosome:NC_014935.1/CP002452.1	-	1	2161	2089	1/18/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713578	GCA_000186245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/245/GCA_000186245.1_ASM18624v1	21886859	DSM 16511
Sphingobium chlorophenolicum	46429	PRJNA239212	239212	Proteobacteria	Alphaproteobacteria	4.79612	64.3	-	JFHR01	129	4549	4350	7/7/14	4/9/17	Contig	Monash University Malaysia	SAMN02670753	GCA_000722875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/875/GCA_000722875.1_Schl_MUMv1	-	NBRC 16172
Peptoanaerobacter stomatis	796937	PRJNA49887	49887	Terrabacteria group	Firmicutes	2.54363	30.4	-	AFZE01	50	2240	2051	12/14/11	4/7/17	Scaffold	Broad Institute	SAMN02463877	GCA_000238115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/115/GCA_000238115.1_Euba_bact_ACC19a_V1	-	ACC19a
Scardovia wiggsiae F0424	857290	PRJNA49881	49881	Terrabacteria group	Actinobacteria	1.5555	52.9	-	AGZS01	2	1295	1222	7/3/12	4/7/17	Scaffold	Broad Institute	SAMN02463874	GCA_000275805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/805/GCA_000275805.1_Scar_wigg_F0424_V1	-	F0424
Pseudomonas fulva NBRC 16637 = DSM 17717	1215102	PRJNA221053	221053	Proteobacteria	Gammaproteobacteria	4.77064	61.8	-	JHYU01	48	4348	4166	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743980	GCA_000621265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/265/GCA_000621265.1_ASM62126v1	-	DSM 17717
Isoptericola variabilis	139208	PRJNA313375	313375	Terrabacteria group	Actinobacteria	3.47693	74.6	-	LWGM01	439	3420	2943	9/30/16	4/18/17	Contig	King Abdullah University of Science and Technology (KAUST)	SAMN04520141	GCA_001750215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/215/GCA_001750215.1_ASM175021v1	-	JZ7
Halalkalicoccus jeotgali B3	795797	PRJNA174946	174946	Euryarchaeota	Halobacteria	3.61412	62.6	-	AOHV01	52	3751	3560	2/4/13	4/8/17	Contig	"University of California, Davis"	SAMN02471620	GCA_000337255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/255/GCA_000337255.1_ASM33725v1	25393412	B3
Prevotella denticola CRIS 18C-A	944557	PRJNA61825	61825	FCB group	Bacteroidetes/Chlorobi group	3.17778	49.9	-	AEXO01	121	2632	2481	3/7/11	4/7/17	Contig	J. Craig Venter Institute	SAMN00195201	GCA_000191765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/765/GCA_000191765.2_ASM19176v1	-	CRIS 18C-A
Propionibacterium propionicum NBRC 14587	1218109	PRJDB282	172105	Terrabacteria group	Actinobacteria	3.38521	66.1	-	BCWS01	26	3027	2916	3/4/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00047213	GCA_001592325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/325/GCA_001592325.1_ASM159232v1	-	NBRC 14587
Mesotoga prima	1184387	PRJNA278302	278302	Thermotogae	Thermotogae	1.71261	45.7	-	LGGP01	440	1903	1903	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445169	GCA_001508515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/515/GCA_001508515.1_ASM150851v1	26787827	-
Desulfurococcus mucosus DSM 2161	675631	PRJNA163045	163045	TACK group	Crenarchaeota	1.19814	53	-	AUQX01	58	1307	1206	5/11/15	5/31/17	Scaffold	DOE Joint Genome Institute	SAMN03649618	GCA_001006085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/085/GCA_001006085.1_ASM100608v1	26767090	DSM 2161
Streptococcus urinalis FB127-CNA-2	883168	PRJNA52133	52133	Terrabacteria group	Firmicutes	2.13978	34.1	-	AHAA01	4	2222	2096	11/6/12	4/8/17	Scaffold	Broad Institute	SAMN02463892	GCA_000314815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/815/GCA_000314815.2_Stre_urin_FB127-CNA2_V1	-	FB127-CNA-2
Achromobacter piechaudii	72556	PRJNA291334	291334	Proteobacteria	Betaproteobacteria	6.18013	64.8	-	LGYD01	17	5651	5500	8/6/15	4/11/17	Scaffold	University of Exeter	SAMN03941583	GCA_001262515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/515/GCA_001262515.1_GCS2v1	26769927	GCS2
Bacteroides clarus	626929	PRJNA377666	377666	FCB group	Bacteroidetes/Chlorobi group	4.15646	45.4	-	NFKE01	35	3484	3354	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473652	GCA_002160225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/225/GCA_002160225.1_ASM216022v1	-	An189
Phascolarctobacterium succinatutens CAG:287	1263101	PRJEB811	206793	Terrabacteria group	Firmicutes	2.39518	46.7	-	CBGL01	96	2262	2225	5/31/13	1/30/15	Scaffold	DTU	SAMEA2272651	GCA_000434895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/895/GCA_000434895.1_MGS287	-	-
Hahella chejuensis KCTC 2396	349521	PRJNA16064	16064	Proteobacteria	Gammaproteobacteria	7.21527	53.9	chromosome:NC_007645.1/CP000155.1	-	1	6424	6274	12/14/05	5/18/17	Complete Genome	Korea Research Institute of Bioscience and Biotechnology (KRIBB)	SAMN02603483	GCA_000012985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/985/GCA_000012985.1_ASM1298v1	16352867	KCTC 2396
Dysgonomonas mossii DSM 22836	742767	PRJNA169721	169721	FCB group	Bacteroidetes/Chlorobi group	3.9238	37.5	-	AQWJ01	32	3354	3280	4/20/13	6/12/17	Contig	DOE Joint Genome Institute	SAMN02441731	GCA_000376405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/405/GCA_000376405.1_ASM37640v1	-	DSM 22836
Thermosynechococcus elongatus BP-1	197221	PRJNA308	308	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.59386	53.9	chromosome:NC_004113.1/BA000039.2	-	1	2525	2476	8/17/02	10/7/16	Complete Genome	Kazusa	SAMD00061106	GCA_000011345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/345/GCA_000011345.1_ASM1134v1	12240834	BP-1
Enterobacter asburiae LF7a	640513	PRJNA41509	41509	Proteobacteria	Gammaproteobacteria	5.01213	53.8376	chromosome:NC_015968.1/CP003026.1; plasmid pENTAS01:NC_015963.1/CP003027.1; plasmid pENTAS02:NC_015969.1/CP003028.1	-	3	4877	4657	8/30/11	3/30/17	Complete Genome	DOE Joint Genome Institute	SAMN02232020	GCA_000224675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/675/GCA_000224675.1_ASM22467v1	-	LF7a
Methylobacter tundripaludum 21/22	1408450	PRJNA223144	223144	Proteobacteria	Gammaproteobacteria	4.66521	49.5	-	JMLA01	1	4155	3970	5/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743378	GCA_000685925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/925/GCA_000685925.1_ASM68592v1	25767239	21/22
Enterococcus saccharolyticus 30_1	742813	PRJNA46415	46415	Terrabacteria group	Firmicutes	3.13766	40.7	-	ADLY01	16	3025	2812	11/2/11	4/7/17	Scaffold	Broad Institute	SAMN02463864	GCA_000234175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/175/GCA_000234175.1_Ente_sacc_30_1_V1	-	30_1
Sutterella wadsworthensis HGA0223	1203554	PRJNA169488	169488	Proteobacteria	Betaproteobacteria	2.98833	54.9	-	ATCF01	3	2474	2347	6/14/13	4/8/17	Scaffold	Broad Institute	SAMN02596980	GCA_000411515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/515/GCA_000411515.1_Sutt_wads_HGA0223_V1	-	HGA0223
Bacteroides oleiciplenus	626931	PRJNA321218	321218	FCB group	Bacteroidetes/Chlorobi group	6.01255	44.3	-	MNQQ01	59	4577	4398	12/23/16	12/23/16	Scaffold	None	SAMN05717222	GCA_001915515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/515/GCA_001915515.1_ASM191551v1	27819664	-
[Clostridium] citroniae WAL-19142	742734	PRJNA46387	46387	Terrabacteria group	Firmicutes	6.25282	49.4	-	ADLK01	38	5788	5493	7/16/15	4/10/17	Scaffold	Broad Institute	SAMN00103560	GCA_001078435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/435/GCA_001078435.1_Clos_citr_WAL_19142_V1	-	WAL-19142
Treponema phagedenis F0421	754027	PRJNA47285	47285	Spirochaetes	Spirochaetia	2.83042	40.1	-	AEFH01	172	2489	2326	1/27/11	6/15/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189161	GCA_000187105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/105/GCA_000187105.1_ASM18710v1	-	F0421
Selenomonas artemidis F0399	749551	PRJNA47277	47277	Terrabacteria group	Firmicutes	2.21031	57.2	-	AECV01	34	2116	2015	1/27/11	4/7/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189154	GCA_000187125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/125/GCA_000187125.1_ASM18712v1	-	F0399
Sphingobium japonicum BiD32	1301087	PRJEB1562	198654	Proteobacteria	Alphaproteobacteria	4.78801	62.7	-	CAVK01	262	4644	4397	4/22/13	4/8/17	Scaffold	MDA	SAMEA2272001	GCA_000382885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/885/GCA_000382885.1_ASM38288v1	-	BiD32
Fusobacterium necrophorum HUN048	1410656	PRJNA223481	223481	Fusobacteria	Fusobacteriia	2.03398	35.1	-	JHWT01	17	1952	1837	4/8/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02744026	GCA_000622045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/045/GCA_000622045.1_ASM62204v1	-	HUN048
[Clostridium] clostridioforme CM201	999410	PRJNA64871	64871	Terrabacteria group	Firmicutes	5.65592	49.2	-	AGYS01	7	5574	5217	4/19/13	5/19/17	Scaffold	Broad Institute	SAMN02596769	GCA_000371405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/405/GCA_000371405.1_Clos_clos_CM201_V1	-	CM201
Nitrosospira multiformis ATCC 25196	323848	PRJNA13912	13912	Proteobacteria	Betaproteobacteria	3.23431	53.835	chromosome:NC_007614.1/CP000103.1; plasmid 1:NC_007615.1/CP000104.1; plasmid 2:NC_007616.1/CP000105.1; plasmid 3:NC_007617.1/CP000106.1	-	4	2939	2817	11/15/05	3/30/17	Complete Genome	DOE Joint Genome Institute	SAMN02598322	GCA_000196355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/355/GCA_000196355.1_ASM19635v1	18390676	ATCC 25196
Brevundimonas diminuta ATCC 11568	751586	PRJNA46229	46229	Proteobacteria	Alphaproteobacteria	3.36932	66.3	-	ADUI01	8	3353	3046	4/11/11	4/7/17	Scaffold	Indiana University	SAMN02469913	GCA_000204035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/035/GCA_000204035.1_ASM20403v1	-	ATCC 11568
Citrobacter koseri	545	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.88445	53.8024	chromosome:CP023527.1; plasmid unnamed:CP023528.1	-	2	4779	4533	9/28/17	9/28/17	Complete Genome	US Food and Drug Administration 	SAMN07312437	GCA_002393245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/245/GCA_002393245.1_ASM239324v1	-	FDAARGOS_393
Leptospira santarosai	28183	PRJNA376503	376503	Spirochaetes	Spirochaetia	3.85894	41.9163	chromosome I:CP022887.1; chromosome II:CP022888.1	-	2	3826	3205	8/24/17	9/8/17	Chromosome	Universidade Federal de Pelotas	SAMN06434274	GCA_002287705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/705/GCA_002287705.1_ASM228770v1	-	DU92
Prevotella bryantii C21a	1280705	PRJNA185731	185731	FCB group	Bacteroidetes/Chlorobi group	3.24928	38.6	-	AUKF01	22	2632	2497	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441482	GCA_000424605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/605/GCA_000424605.1_ASM42460v1	-	C21a
Desulfotomaculum nigrificans DSM 574	696369	PRJNA46699	46699	Terrabacteria group	Firmicutes	3.05279	46.3	-	AEVP02	1	3055	2873	2/17/11	4/9/17	Scaffold	US DOE Joint Genome Institute (JGI-PGF)	SAMN02441786	GCA_000189755.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/755/GCA_000189755.3_ASM18975v3	-	DSM 574
Citrobacter koseri	545	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.93609	53.8005	chromosome:CP022073.1; plasmid unnamed1:CP022074.1; plasmid unnamed2:CP022075.1	-	3	4863	4389	6/27/17	6/27/17	Complete Genome	US Food and Drug Administration 	SAMN06173300	GCA_002208985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/985/GCA_002208985.1_ASM220898v1	-	FDAARGOS_287
Corynebacterium glutamicum	1718	PRJNA381819	381819	Terrabacteria group	Actinobacteria	3.30663	53.8	chromosome:NZ_CP020658.1/CP020658.1	-	1	3120	2951	6/2/17	6/5/17	Complete Genome	Tianjin university of science and technology	SAMN06689708	GCA_002163915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/915/GCA_002163915.1_ASM216391v1	-	TQ2223
Mycoplasma ovipneumoniae	29562	PRJNA253502	253502	Terrabacteria group	Tenericutes	1.01226	29	-	JOTF01	76	772	687	8/26/16	4/5/17	Scaffold	Southwest University for Nationalities	SAMN02870872	GCA_001715025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/025/GCA_001715025.1_ASM171502v1	-	TC2
Thermus scotoductus DSM 8553	1123391	PRJNA182443	182443	Terrabacteria group	Deinococcus-Thermus	2.0707	64.8	-	ARLD01	84	2277	2062	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441334	GCA_000381045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/045/GCA_000381045.1_ASM38104v1	-	DSM 8553
Marinobacter adhaerens	1033846	PRJNA320140	320140	Proteobacteria	Gammaproteobacteria	4.24651	57.2	-	LXRF01	21	3908	3805	8/31/16	4/13/17	Contig	Biotechnology Research Institute	SAMN04917425	GCA_001717765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/765/GCA_001717765.1_ASM171776v1	-	PBVC038
[Eubacterium] cellulosolvens LD2006	1408436	PRJNA223050	223050	Terrabacteria group	Firmicutes	3.33194	49.2	-	JHXY01	77	2886	2683	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02744000	GCA_000621585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/585/GCA_000621585.1_ASM62158v1	-	LD2006
Acinetobacter oleivorans CIP 110421	1391912	PRJNA217358	217358	Proteobacteria	Gammaproteobacteria	4.14252	38.7	-	AYES01	4	3989	3840	10/29/13	4/6/17	Scaffold	Broad Institute	SAMN02335353	GCA_000488235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/235/GCA_000488235.1_Acin_olei_CIP110421_V2	-	CIP 110421
Waddlia chondrophila WSU 86-1044	716544	PRJNA315386	315386	PVC group	Chlamydiae	2.11172	43.8	-	LVEB01	195	1911	1792	4/11/16	3/29/17	Contig	Moredun Research Institute	SAMN04558133	GCA_001618265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/265/GCA_001618265.1_ASM161826v1	-	WSU 86-1044
Roseburia hominis	301301	PRJEB10915	297013	Terrabacteria group	Firmicutes	6.05657	42.8	-	CYZJ01	299	5523	5430	10/1/15	5/19/16	Contig	SC	SAMEA3545242	GCA_001405875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/875/GCA_001405875.1_13414_6_18	-	2789STDY5608834
Marinobacter psychrophilus	330734	PRJNA284323	284323	Proteobacteria	Gammaproteobacteria	3.9986	53.8	chromosome:NZ_CP011494.1/CP011494.1	-	1	3690	3503	6/30/15	4/17/17	Complete Genome	"Beijing Institute of Genomics, Chinese Academy of Sciences"	SAMN03701403	GCA_001043175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/175/GCA_001043175.1_ASM104317v1	-	20041
Komagataeibacter hansenii JCM 7643	1231352	PRJDB503	174854	Proteobacteria	Alphaproteobacteria	3.71096	59.3	-	BANE01	467	3318	3136	3/20/15	4/3/17	Scaffold	Kinki University	SAMD00036640	GCA_000964405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/405/GCA_000964405.1_ASM96440v1	-	JCM 7643
Lactobacillus sanfranciscensis DSM 20451	1423800	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.23175	34.7	-	AYYM01	68	1296	1181	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369496	GCA_001436035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/035/GCA_001436035.1_ASM143603v1	26415554	DSM 20451
Lysinibacillus fusiformis	28031	PRJNA340959	340959	Terrabacteria group	Firmicutes	4.89247	37.3	-	MECQ01	3	4819	4592	9/14/16	4/13/17	Scaffold	Seqomics Ltd	SAMN05715906	GCA_001726065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/065/GCA_001726065.1_ASM172606v1	-	M5
Corynebacterium glutamicum K051	1204414	PRJNA157367	157367	Terrabacteria group	Actinobacteria	3.3094	53.8	chromosome:NC_020519.1/HE802067.1	-	1	3132	3007	4/20/12	4/1/17	Complete Genome	Forschungszentrum Juelich GmbH	SAMEA3138433	GCA_000382905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/905/GCA_000382905.1_ASM38290v1	22640862	ATCC 13032 substr. K051
Anaerolinea thermophila UNI-1	926569	PRJNA60099	60099	Terrabacteria group	Chloroflexi	3.53238	53.8	chromosome:NC_014960.1/AP012029.1	-	1	3184	3105	1/25/11	4/7/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00061114	GCA_000199675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/199/675/GCA_000199675.1_ASM19967v1	-	UNI-1
Corynebacterium glutamicum ATCC 13032	196627	PRJNA13760	13760	Terrabacteria group	Actinobacteria	3.28271	53.8	chromosome:NC_006958.1/BX927147.1	-	1	3098	2969	1/23/04	3/30/17	Complete Genome	Universitaet Bielefeld	SAMEA3138338	GCA_000196335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/335/GCA_000196335.1_ASM19633v1	12948626	DSM 20300 = ATCC 13032
Helicobacter suis HS5	710394	PRJNA43417	43417	Proteobacteria	delta/epsilon subdivisions	1.66996	39.9	-	ADHO01	319	1698	1481	2/1/11	3/30/17	Contig	"Ghent University, Faculty of Veterinary Medicine, Department of Pathology, Bacteriology and Avian Diseases"	SAMN02469775	GCA_000187605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/605/GCA_000187605.2_ASM18760v1	21414191	HS5
Corynebacterium glutamicum ATCC 13032	196627	PRJNA307	307	Terrabacteria group	Actinobacteria	3.3094	53.8	chromosome:NC_003450.3/BA000036.3	-	1	3057	2959	3/12/01	10/7/16	Complete Genome	Kitasato Univ.	SAMD00061105	GCA_000011325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/325/GCA_000011325.1_ASM1132v1	"1,274,375,315,870,320"	ATCC 13032
Solobacterium moorei F0204	706433	PRJNA43121	43121	Terrabacteria group	Firmicutes	2.00807	36.8	-	AECQ01	33	1997	1909	1/27/11	6/15/17	Scaffold	Washington University Genome Sequencing Center	SAMN00189155	GCA_000186945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/945/GCA_000186945.2_ASM18694v2	-	F0204
Prevotella nigrescens CC14M	1073366	PRJNA71565	71565	FCB group	Bacteroidetes/Chlorobi group	2.98673	42.8	-	AZJH01	35	2631	2438	12/10/13	4/9/17	Scaffold	Broad Institute	SAMN01162077	GCA_000507825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/507/825/GCA_000507825.1_Prev_nigr_CC14M_V1	-	CC14M
Acinetobacter haemolyticus ATCC 19194	707232	PRJNA43187	43187	Proteobacteria	Gammaproteobacteria	3.7152	40.4	-	ADMT01	61	3305	3031	4/1/10	3/30/17	Scaffold	Baylor College of Medicine	SAMN00113594	GCA_000164055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/055/GCA_000164055.1_ASM16405v1	-	ATCC 19194
Citrobacter koseri ATCC BAA-895	290338	PRJNA12716	12716	Proteobacteria	Gammaproteobacteria	4.73536	53.7998	chromosome:NC_009792.1/CP000822.1; plasmid pCKO2:NC_009794.1/CP000824.1; plasmid pCKO3:NC_009793.1/CP000823.1	-	3	4538	4321	9/11/07	3/30/17	Complete Genome	The Citrobacter koseri Genome Sequencing Project	SAMN02603912	GCA_000018045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/045/GCA_000018045.1_ASM1804v1	-	ATCC BAA-895
Pantoea stewartii subsp. stewartii DC283	660596	PRJNA342501	342501	Proteobacteria	Gammaproteobacteria	5.31409	53.7776	chromosome:NZ_CP017581.1/CP017581.1; plasmid pDSJ01:NZ_CP017582.1/CP017582.1; plasmid pDSJ02:NZ_CP017583.1/CP017583.1; plasmid pDSJ03:NZ_CP017584.1/CP017584.1; plasmid pDSJ04:NZ_CP017585.1/CP017585.1; plasmid pDSJ05:NZ_CP017586.1/CP017586.1; plasmid pDSJ06:NZ_CP017587.1/CP017587.1; plasmid pDSJ07:NZ_CP017588.1/CP017588.1; plasmid pDSJ08:NZ_CP017589.1/CP017589.1; plasmid pDSJ09:NZ_CP017590.1/CP017590.1; plasmid pDSJ10:NZ_CP017591.1/CP017591.1; plasmid ppDSJ01:NZ_CP017592.1/CP017592.1	-	12	5453	4942	4/10/17	4/13/17	Complete Genome	Virginia Polytechnic Institute and State University 	SAMN05761485	GCA_002082215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/215/GCA_002082215.1_ASM208221v1	-	DC283
Planctopirus limnophila DSM 3776	521674	PRJNA29411	29411	PVC group	Planctomycetes	5.46009	53.7224	chromosome:NC_014148.1/CP001744.1; plasmid pPLIM01:NC_014149.1/CP001745.1	-	2	4392	4294	5/13/10	9/3/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598463	GCA_000092105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/105/GCA_000092105.1_ASM9210v1	21304691	DSM 3776
Prevotella oulorum F0390	702438	PRJNA43117	43117	FCB group	Bacteroidetes/Chlorobi group	2.80589	46.8	-	ADGI01	16	2458	2259	8/19/11	4/7/17	Scaffold	Broad Institute	SAMN02463847	GCA_000224615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/615/GCA_000224615.1_Prev_oulo_F0390_V1	-	F0390
Streptomyces violaceusniger	68280	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.4602	71	-	LLZJ01	439	9020	8155	1/8/16	3/12/17	Contig	University of Illinois	SAMN03327491	GCA_001509775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/775/GCA_001509775.1_ASM150977v1	-	NRRL F-8817
Turicibacter sanguinis	154288	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.61202	34.3	-	CYZQ01	59	2422	2306	10/1/15	4/11/17	Contig	SC	SAMEA3545317	GCA_001406595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/595/GCA_001406595.1_13470_2_70	-	2789STDY5834851
Niastella koreensis	354356	PRJNA316905	316905	FCB group	Bacteroidetes/Chlorobi group	8.98616	44.9	-	LWBO01	84	7264	7120	4/3/17	4/5/17	Contig	Huzhong Agricultural University	SAMN04592475	GCA_002077985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/985/GCA_002077985.1_ASM207798v1	-	GR20
Parascardovia denticolens DSM 10105 = JCM 12538	864564	PRJNA50509	50509	Terrabacteria group	Actinobacteria	1.89145	58.3	chromosome:NZ_CM001148.1/CM001148.1	AEON01	1	3329	3189	12/16/10	4/7/17	Chromosome	Baylor College of Medicine	SAMN02299441	GCA_000191785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/785/GCA_000191785.1_ASM19178v1	-	DSM 10105
Serratia fonticola	47917	PRJNA308245	308245	Proteobacteria	Gammaproteobacteria	6.3258	53.7171	chromosome:NZ_CP013913.1/CP013913.1; plasmid pSF001:NZ_CP013914.1/CP013914.1; plasmid pSF002:NZ_CP013915.1/CP013915.1	-	3	5915	5580	1/14/16	4/4/17	Complete Genome	"Shin's Lab., Kyungpook National University"	SAMN04390144	GCA_001514455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/455/GCA_001514455.1_ASM151445v1	-	GS2
Kosakonia radicincitans DSM 16656	1177180	PRJNA161109	161109	Proteobacteria	Gammaproteobacteria	6.12245	53.717	chromosome:NZ_CP018016.1/CP018016.1; plasmid pKrDSM16656L:NZ_CP018017.1/CP018017.1; plasmid pKrDSM16656S:NZ_CP018018.1/CP018018.1	-	3	5970	5712	4/3/17	4/5/17	Complete Genome	Leibniz-Institute of Vegetable and Ornamental Crpos	SAMN02470245	GCA_000280495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/495/GCA_000280495.2_ASM28049v2	22965092	DSM 16656
[Clostridium] saccharolyticum	84030	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.49162	50.3	-	NFKU01	77	3285	3089	5/30/17	6/30/17	Contig	Veterinary Research Institute	SAMN06473634	GCA_002160535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/535/GCA_002160535.1_ASM216053v1	-	An168
Bilophila wadsworthia 3_1_6	563192	PRJNA41963	41963	Proteobacteria	delta/epsilon subdivisions	4.39119	59.3	-	ADCP02	4	3860	3728	1/4/11	4/8/17	Scaffold	Broad Institute	SAMN02463824	GCA_000185705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/705/GCA_000185705.2_Bilo_wads_3_1_6_V2	-	3_1_6
Ochrobactrum pseudogrignonense	419475	PRJNA321461	321461	Proteobacteria	Alphaproteobacteria	4.9928	53.7131	chromosome 1:NZ_CP015775.1/CP015775.1; chromosome 2:NZ_CP015776.1/CP015776.1	-	2	4751	4577	5/26/16	4/17/17	Complete Genome	University of Malaya	SAMN04994838	GCA_001652485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/485/GCA_001652485.1_ASM165248v1	-	K8
Capnocytophaga granulosa	45242	PRJEB16575	349885	FCB group	Bacteroidetes/Chlorobi group	2.72345	41.5	-	FNND01	44	2497	2373	10/22/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444420	GCA_900106575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/575/GCA_900106575.1_IMG-taxon_2693429885_annotated_assembly	-	DSM 11449
Scardovia inopinata F0304	641146	PRJNA41979	41979	Terrabacteria group	Actinobacteria	1.80401	48.6	-	ADCX01	9	1524	1397	3/30/10	4/7/17	Scaffold	Broad Institute	SAMN02463832	GCA_000163755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/755/GCA_000163755.1_ASM16375v1	-	F0304
Kosakonia sacchari	1158459	PRJNA327605	327605	Proteobacteria	Gammaproteobacteria	4.90211	53.7	chromosome:NZ_CP016337.1/CP016337.1	-	1	4723	4510	7/11/16	4/13/17	Complete Genome	Nagoya University	SAMN05349011	GCA_001683395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/395/GCA_001683395.1_ASM168339v1	-	BO-1
Haloterrigena turkmenica	62320	PRJNA297157	297157	Euryarchaeota	Halobacteria	2.9509	64	-	LKCV01	574	3043	2532	12/29/15	4/11/17	Contig	Aljouf university	SAMN04115933	GCA_001483125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/483/125/GCA_001483125.1_ASM148312v1	26981365	WANU15
Citrobacter amalonaticus	35703	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.90461	53.7	chromosome:NZ_CP014015.1/CP014015.1	-	1	4724	4412	2/11/16	4/4/17	Complete Genome	US Food and Drug Administration 	SAMN03996265	GCA_001559075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/075/GCA_001559075.1_ASM155907v1	-	FDAARGOS_122
Bacillus cytotoxicus	580165	PRJNA394959	394959	Terrabacteria group	Firmicutes	4.35262	35.8	-	NOKC01	3	4545	4065	8/14/17	8/16/17	Contig	University of Zurich	SAMN07367963	GCA_002250885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/885/GCA_002250885.1_ASM225088v1	-	CH_38
Kosakonia sacchari SP1	1235834	PRJNA175988	175988	Proteobacteria	Gammaproteobacteria	4.90203	53.7	chromosome:NZ_CP007215.2/CP007215.3	-	1	4751	4545	2/20/14	9/24/17	Complete Genome	Zhejiang University	SAMN02472168	GCA_000300455.4	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/455/GCA_000300455.4_ASM30045v4	23209221	SP1
Corynebacterium diphtheriae HC02	698968	PRJNA42411	42411	Terrabacteria group	Actinobacteria	2.46861	53.7	chromosome:NC_016802.1/CP003213.1	-	1	2380	2201	1/13/12	3/30/17	Complete Genome	"Center for Biotechnology, Bielefeld University"	SAMN02603072	GCA_000255155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/155/GCA_000255155.1_ASM25515v1	22505676	HC02
Corynebacterium diphtheriae PW8	698964	PRJNA42403	42403	Terrabacteria group	Actinobacteria	2.53068	53.7	chromosome:NC_016789.1/CP003216.1	-	1	2451	2214	1/13/12	3/30/17	Complete Genome	"Center for Biotechnology, Bielefeld University"	SAMN02603068	GCA_000255275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/275/GCA_000255275.1_ASM25527v1	22505676	PW8
Corynebacterium diphtheriae INCA 402	698972	PRJNA42419	42419	Terrabacteria group	Actinobacteria	2.44907	53.7	chromosome:NC_016783.1/CP003208.1	-	1	2347	2155	1/10/12	3/30/17	Complete Genome	"Center for Biotechnology, Bielefeld University"	SAMN02603075	GCA_000241915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/915/GCA_000241915.1_ASM24191v1	22505676	INCA 402
Rothia dentocariosa ATCC 17931	762948	PRJNA48447	48447	Terrabacteria group	Actinobacteria	2.50603	53.7	chromosome:NC_014643.1/CP002280.1	-	1	2164	2074	11/3/10	3/30/17	Complete Genome	Baylor College of Medicine	SAMN00120582	GCA_000164695.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/695/GCA_000164695.2_ASM16469v2	-	ATCC 17931
Pseudomonas amygdali pv. aesculi str. 0893_23	629258	PRJNA33201	33201	Proteobacteria	Gammaproteobacteria	6.00567	58.1	-	AEAD01	463	5597	5031	7/8/10	5/19/17	Scaffold	University of North Carolina at Chapel Hill	SAMN02471319	GCA_000145685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/685/GCA_000145685.1_ASM14568v1	21799664	0893_23
Pantoea ananatis LMG 20103	706191	PRJNA43085	43085	Proteobacteria	Gammaproteobacteria	4.70337	53.7	chromosome:NC_013956.2/CP001875.2	-	1	4388	4126	3/16/10	3/30/17	Complete Genome	Forestry and Agricultural Biotechnology Institute	SAMN02603236	GCA_000025405.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/405/GCA_000025405.2_ASM2540v1	20348253	LMG 20103
Shewanella loihica PV-4	323850	PRJNA13906	13906	Proteobacteria	Gammaproteobacteria	4.60259	53.7	chromosome:NC_009092.1/CP000606.1	-	1	4063	3902	3/7/07	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN00623064	GCA_000016065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/065/GCA_000016065.1_ASM1606v1	-	PV-4
Hyperthermus butylicus DSM 5456	415426	PRJNA208	208	TACK group	Crenarchaeota	1.66716	53.7	chromosome:NC_008818.1/CP000493.1	-	1	1765	1676	1/22/07	4/17/17	Complete Genome	Univ. Copenhagen	SAMN02604082	GCA_000015145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/145/GCA_000015145.1_ASM1514v1	17350933	DSM 5456
Pantoea ananatis AJ13355	932677	PRJDA60793	60793	Proteobacteria	Gammaproteobacteria	4.87728	53.6813	chromosome:NC_017531.2/AP012032.2; plasmid pEA320:NC_017533.1/AP012033.1	-	2	4546	4262	4/2/11	4/4/17	Complete Genome	"Ajinomoto Co.,Inc"	SAMD00060978	GCA_000270125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/125/GCA_000270125.2_ASM27012v2	-	AJ13355
Prevotella amnii	419005	PRJNA246504	246504	FCB group	Bacteroidetes/Chlorobi group	2.37856	36.5	-	LSDL01	112	2098	1933	2/8/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN04324898	GCA_001553225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/225/GCA_001553225.1_ASM155322v1	-	DNF00307
Prevotella buccalis DNF00853	1401074	PRJNA219672	219672	FCB group	Bacteroidetes/Chlorobi group	2.95421	45.6	-	JRNN01	97	2461	2321	9/26/14	4/9/17	Contig	J. Craig Venter Institute	SAMN02850973	GCA_000759185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/185/GCA_000759185.1_04_NF40_HMP2137v01	-	DNF00853
Grimontia hollisae CIP 101886	675812	PRJNA40495	40495	Proteobacteria	Gammaproteobacteria	4.00279	49.5	-	ADAQ01	13	3691	3508	10/29/09	4/7/17	Contig	"Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR)"	SAMN02393821	GCA_000176515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/515/GCA_000176515.1_ASM17651v1	-	CIP 101886
Prevotella timonensis 4401737 = DSM 22865 = JCM 15640	1122992	PRJNA188813	188813	FCB group	Bacteroidetes/Chlorobi group	3.15606	42.4	-	AUMG01	124	2675	2473	7/15/13	4/6/17	Scaffold	DOE Joint Genome Institute	SAMN02440805	GCA_000430565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/565/GCA_000430565.1_ASM43056v1	-	DSM 22865
Vibrio furnissii ZOR0035	1339240	PRJNA205593	205593	Proteobacteria	Gammaproteobacteria	4.62076	50.1	-	JTLJ01	104	4349	4177	12/8/14	4/9/17	Scaffold	University of Oregon	SAMN03021533	GCA_000799015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/015/GCA_000799015.1_ZOR0035.1	-	ZOR0035
Pantoea ananatis	553	PRJNA382605	382605	Proteobacteria	Gammaproteobacteria	5.14833	53.6369	chromosome:NZ_CP022427.1/CP022427.1; plasmid p_unamed1:NZ_CP022429.1/CP022429.1; plasmid p_unamed2:NZ_CP022431.1/CP022431.1; plasmid p_unamed3:NZ_CP022428.1/CP022428.1; plasmid p_unamed4:NZ_CP022430.1/CP022430.1	-	5	4875	4602	7/24/17	7/28/17	Complete Genome	Beijing Institute of Technology	SAMN06711086	GCA_002224585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/585/GCA_002224585.1_ASM222458v1	26923129	YJ76
Vibrio orientalis CIP 102891 = ATCC 33934	675816	PRJNA68623	68623	Proteobacteria	Gammaproteobacteria	4.65301	44.7	-	AFWH01	105	4308	4181	8/4/11	5/19/17	Contig	Food and Drug Administration	SAMN02951904	GCA_000222645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/645/GCA_000222645.2_ASM22264v2	21930677	CIP 102891
Serratia odorifera	618	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.52651	56.1	-	NJFR01	6	5336	4638	6/23/17	6/26/17	Contig	US Food and Drug Administration 	SAMN06173366	GCA_002206385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/385/GCA_002206385.1_ASM220638v1	-	FDAARGOS_353
Komagataeibacter xylinus NBRC 13693	1234668	PRJDB503	174854	Proteobacteria	Alphaproteobacteria	3.336	61.9	-	BANJ01	211	3060	2891	3/20/15	4/10/17	Contig	Kinki University	SAMD00036645	GCA_000964505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/505/GCA_000964505.1_ASM96450v1	-	NBRC 13693
Pantoea ananatis PA13	1095774	PRJNA74285	74285	Proteobacteria	Gammaproteobacteria	4.86713	53.6192	chromosome:NC_017554.1/CP003085.1; plasmid PAGR_p:NC_017553.1/CP003086.1	-	2	4643	4442	11/1/11	3/30/17	Complete Genome	Gyeongsang National University	SAMN02603299	GCA_000233595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/595/GCA_000233595.1_ASM23359v1	22207741	PA13
Erwinia amylovora ATCC 49946	716540	PRJEA43757	43757	Proteobacteria	Gammaproteobacteria	3.9056	53.6139	chromosome:NC_013971.1/FN666575.1; plasmid 1:NC_013972.1/FN666576.1; plasmid 2:NC_013973.1/FN666577.1	-	3	3686	3488	3/19/10	3/30/17	Complete Genome	Wellcome Trust Sanger Institute	SAMEA2272701	GCA_000027205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/027/205/GCA_000027205.1_ASM2720v1	20118253	ATCC 49946
Erwinia sp. Ejp617	215689	PRJNA51141	51141	Proteobacteria	Gammaproteobacteria	3.95768	53.6055	chromosome:NC_017445.1/CP002124.1; plasmid pJE01:NC_017442.1/CP002125.1; plasmid pJE02:NC_017446.1/CP002126.1; plasmid pJE03:NC_017443.1/CP002127.1; plasmid pJE04:NC_017447.1/CP002128.1; plasmid pJE05:NC_017444.1/CP002129.1	-	6	3751	3429	10/29/10	4/17/17	Complete Genome	Kangwon National University	SAMN02603467	GCA_000165815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/165/815/GCA_000165815.1_ASM16581v1	21075933	Ejp617
Vibrio alginolyticus	663	PRJNA288141	288141	Proteobacteria	Gammaproteobacteria	4.46823	42.8	-	LFWL01	200	4043	3849	8/17/15	4/4/17	Scaffold	Health Canada	SAMN03795183	GCA_001267945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/945/GCA_001267945.1_ASM126794v1	-	RM-24-2
Cylindrospermopsis raciborskii CS-505	533240	PRJNA40109	40109	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.87903	40.2	-	ACYA01	93	3523	3222	12/15/09	4/7/17	Contig	FLI Jena	SAMN02470243	GCA_000175835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/835/GCA_000175835.1_ASM17583v1	20169071	CS-505
Pasteurella dagmatis ATCC 43325	667128	PRJNA40085	40085	Proteobacteria	Gammaproteobacteria	2.26325	37.5	-	ACZR01	14	2060	1983	10/6/09	4/7/17	Scaffold	Baylor College of Medicine	SAMN00120578	GCA_000163475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/475/GCA_000163475.1_ASM16347v1	-	ATCC 43325
Bacillus smithii 7_3_47FAA	665952	PRJNA40007	40007	Terrabacteria group	Firmicutes	3.2389	40.7	-	ACWF01	28	3403	2912	12/16/11	4/7/17	Scaffold	Broad Institute	SAMN02463789	GCA_000238675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/675/GCA_000238675.1_Baci_smit_7_3_47FAA_V1	-	7_3_47FAA
Methylotenera versatilis 79	1115835	PRJNA157083	157083	Proteobacteria	Betaproteobacteria	2.60428	41.9	-	ARVX01	1	2448	2397	4/26/13	6/20/17	Contig	JGI	SAMN02261245	GCA_000384375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/375/GCA_000384375.1_ASM38437v1	-	79
Cronobacter turicensis z508	1390075	PRJNA215839	215839	Proteobacteria	Gammaproteobacteria	4.18371	58	-	AVPP01	291	4120	3787	10/29/13	4/9/17	Contig	"OARSA, CFSAN"	SAMN02319256	GCA_000485925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/925/GCA_000485925.1_Etur508	-	z508
Enterobacter sp. FY-07	1692238	PRJNA291313	291313	Proteobacteria	Gammaproteobacteria	5.1387	53.6005	chromosome:NZ_CP012487.1/CP012487.1; plasmid pAKI40A:NZ_CP012488.1/CP012488.1; plasmid pAKI40B:NZ_CP012489.1/CP012489.1; plasmid pAKI40C:NZ_CP012490.1/CP012490.1	-	4	4995	4791	3/8/16	4/12/17	Complete Genome	Nankai University	SAMN03941339	GCA_001582075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/075/GCA_001582075.1_ASM158207v1	26911736	FY-07
[Clostridium] innocuum	1522	PRJNA289613	289613	Terrabacteria group	Firmicutes	4.46908	43.3	chromosome:NZ_CP022722.1/CP022722.1	-	1	4411	4098	8/10/17	8/17/17	Chromosome	Max von Pettenkofer-Institut	SAMN03854114	GCA_002221705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/705/GCA_002221705.2_ASM222170v2	-	I46
Pantoea stewartii subsp. indologenes	66270	PRJNA252992	252992	Proteobacteria	Gammaproteobacteria	4.68124	53.7	-	JPKO01	35	4266	3936	9/23/14	9/23/14	Scaffold	University of Pretoria	SAMN02905159	GCA_000757405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/405/GCA_000757405.1_LMG2632assem4	-	LMG 2632
Nitrosospira lacus	1288494	PRJEB1373	195525	Proteobacteria	Betaproteobacteria	3.26109	53.6	chromosome:NZ_CP021106.3/CP021106.3	-	1	2967	2875	5/3/17	7/22/17	Complete Genome	MDA	SAMEA2272307	GCA_000355765.4	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/765/GCA_000355765.4_ASM35576v4	25336720	APG3
Candidatus Regiella insecticola 5.15	1005043	PRJNA65437	65437	Proteobacteria	Gammaproteobacteria	2.01307	42.6	-	AGCA01	562	1983	1577	9/23/11	4/7/17	Contig	Yale University	SAMN02472138	GCA_000284655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/655/GCA_000284655.1_ASM28465v1	21948522	5.15
Methylotenera mobilis 13	1132855	PRJNA165261	165261	Proteobacteria	Betaproteobacteria	2.80379	42.6	-	ARBA01	1	2676	2592	4/22/13	6/20/17	Scaffold	DOE Joint Genome Institute	SAMN02256405	GCA_000384255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/255/GCA_000384255.1_ASM38425v1	-	13
Prevotella veroralis F0319	649761	PRJNA38331	38331	FCB group	Bacteroidetes/Chlorobi group	2.99394	41.9	-	ACVA01	26	2640	2378	8/11/09	4/10/17	Scaffold	WUGSC	SAMN00008850	GCA_000162935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/935/GCA_000162935.1_ASM16293v1	-	F0319
Acinetobacter lwoffii WJ10621	1046625	PRJNA68097	68097	Proteobacteria	Gammaproteobacteria	3.18432	41.6	chromosome:NZ_CM001194.1/CM001194.1	AFQY01	1	3126	2886	6/23/11	4/10/17	Chromosome	"Department of Laboratory Medicine, General Hospital Of Chinese People's Armed Police Forces"	SAMN02471142	GCA_000219275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/275/GCA_000219275.1_ASM21927v1	21742884	WJ10621
Corynebacterium diphtheriae	1717	PRJNA355958	355958	Terrabacteria group	Actinobacteria	2.47415	53.6	chromosome:NZ_CP018331.1/CP018331.1	-	1	2376	2178	12/13/16	4/6/17	Complete Genome	University of Malaya	SAMN06099113	GCA_001902275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/275/GCA_001902275.1_ASM190227v1	-	B-D-16-78
Acinetobacter junii SH205	575587	PRJNA38341	38341	Proteobacteria	Gammaproteobacteria	3.46306	39	-	ACPM01	44	3289	3069	10/21/09	3/30/17	Scaffold	Broad Institute	SAMN02463730	GCA_000162075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/075/GCA_000162075.1_ASM16207v1	23144699	SH205
Acinetobacter johnsonii SH046	575586	PRJNA38339	38339	Proteobacteria	Gammaproteobacteria	3.69001	41.3	-	ACPL01	47	3504	3251	10/21/09	3/30/17	Scaffold	Broad Institute	SAMN02463729	GCA_000162055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/055/GCA_000162055.1_ASM16205v1	23144699	SH046
Serratia fonticola	47917	PRJNA279822	279822	Proteobacteria	Gammaproteobacteria	6.00051	53.6	chromosome:NZ_CP011254.1/CP011254.1	-	1	5453	5257	5/11/15	4/3/17	Complete Genome	University of Malaya	SAMN03450772	GCA_001006005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/005/GCA_001006005.1_ASM100600v1	-	DSM 4576
Prevotella oris C735	563008	PRJNA42537	42537	FCB group	Bacteroidetes/Chlorobi group	3.34623	43.9	-	ADDV01	57	2908	2637	2/26/10	4/7/17	Scaffold	Broad Institute	SAMN02463839	GCA_000142965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/142/965/GCA_000142965.1_ASM14296v1	-	C735
Planktomarina temperata RCA23	666509	PRJNA42833	42833	Proteobacteria	Alphaproteobacteria	3.28812	53.6	chromosome:NZ_CP003984.1/CP003984.1	-	1	3191	3101	8/7/14	4/9/17	Complete Genome	Georg-August-University	SAMN02953969	GCA_000738435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/435/GCA_000738435.1_ASM73843v1	25083934	RCA23
Zunongwangia profunda	398743	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.55261	36	-	DBAH01	352	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450470	GCA_002291575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/575/GCA_002291575.1_ASM229157v1	28894102	-
Pseudomonas coronafaciens pv. atropurpurea	129135	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.79303	57.8	-	LJPS01	167	5444	5055	10/20/15	4/4/17	Scaffold	University of Toronto	SAMN03976276	GCA_001400695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/695/GCA_001400695.1_ParICMP4457	-	ICMP4457
Corynebacterium diphtheriae CDCE 8392	698965	PRJNA42405	42405	Terrabacteria group	Actinobacteria	2.43333	53.6	chromosome:NC_016785.1/CP003211.1	-	1	2340	2141	1/13/12	3/30/17	Complete Genome	"Center for Biotechnology, Bielefeld University"	SAMN02603069	GCA_000255215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/215/GCA_000255215.1_ASM25521v1	22505676	CDCE 8392
Pseudomonas syringae pv. maculicola str. ES4326	629265	PRJNA33215	33215	Proteobacteria	Gammaproteobacteria	6.27905	58.3	-	AEAK01	305	5955	5338	7/8/10	5/19/17	Scaffold	University of North Carolina at Chapel Hill	SAMN02471321	GCA_000145845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/845/GCA_000145845.1_ASM14584v1	21799664	ES4326
Corynebacterium diphtheriae 31A	698962	PRJNA42399	42399	Terrabacteria group	Actinobacteria	2.53535	53.6	chromosome:NC_016799.1/CP003206.1	-	1	2478	2270	1/10/12	3/30/17	Complete Genome	"Center for Biotechnology, Bielefeld University"	SAMN02603066	GCA_000241875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/875/GCA_000241875.1_ASM24187v1	22505676	31A
Acidovorax citrulli	80869	PRJNA270710	270710	Proteobacteria	Betaproteobacteria	5.07516	68.6	-	JXDJ01	24	4627	4281	2/26/15	4/10/17	Scaffold	"Institute of Plant Protection, Chinese Academy of Agricultural Sciences"	SAMN03268415	GCA_000968215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/215/GCA_000968215.1_ASM96821v1	25908132	tw6
Candidatus Liberibacter solanacearum	556287	PRJNA251993	251993	Proteobacteria	Alphaproteobacteria	1.20426	35.3	-	JNVH01	99	1112	936	9/18/14	4/17/17	Contig	"Crop Diseases, Pests, Genetics Research Unit, San Joaquin Valley Agricultural Sciences Center, USDA"	SAMN02847832	GCA_000756225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/225/GCA_000756225.1_ASM75622v1	25540355	R1
Bacteroides xylanisolvens SD CC 1b	702447	PRJNA42773	42773	FCB group	Bacteroidetes/Chlorobi group	6.05981	42	-	ADKP01	236	4982	4633	4/8/10	5/18/17	Contig	J. Craig Venter Institute	SAMN00007489	GCA_000178215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/215/GCA_000178215.1_ASM17821v1	-	SD CC 1b
Faecalitalea cylindroides ATCC 27803	649755	PRJNA38321	38321	Terrabacteria group	Firmicutes	1.94643	34.7	-	AWVI01	126	1980	1855	9/18/13	4/9/17	Scaffold	WUGSC	SAMN02436728	GCA_000469305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/305/GCA_000469305.1_ASM46930v1	-	ATCC 27803
Ruminococcus champanellensis 18P13 = JCM 17042	213810	PRJDB896	243773	Terrabacteria group	Firmicutes	2.51174	53.4	-	BBEP01	57	2571	1860	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00016815	GCA_001312825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/825/GCA_001312825.1_ASM131282v1	-	JCM 17042
Ruminococcus bromii L2-63	657321	PRJNA39153	39153	Terrabacteria group	Firmicutes	2.24909	41.4	chromosome:FP929051.1	-	1	1852	1811	3/25/10	2/27/15	Chromosome	MetaHIT	SAMEA3138353	GCA_000209875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/209/875/GCA_000209875.1_ASM20987v1	-	L2-63
Corynebacterium diphtheriae BH8	698973	PRJNA42423	42423	Terrabacteria group	Actinobacteria	2.48552	53.6	chromosome:NC_016800.1/CP003209.1	-	1	2469	2262	1/10/12	3/30/17	Complete Genome	"Center for Biotechnology, Bielefeld University"	SAMN02603077	GCA_000241935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/935/GCA_000241935.1_ASM24193v1	22505676	BH8
Atopobium parvulum DNF00906	1287474	PRJNA187519	187519	Terrabacteria group	Actinobacteria	1.52787	48.4	-	JRND01	43	1353	1282	9/26/14	4/9/17	Contig	JCVI	SAMN02850943	GCA_000758945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/945/GCA_000758945.1_04_NF40_HMP1647v01	-	DNF00906
Prevotella buccae D17	575611	PRJNA38737	38737	FCB group	Bacteroidetes/Chlorobi group	3.35795	50.9	-	ACRB01	84	2819	2571	1/7/10	4/10/17	Scaffold	Broad Institute	SAMN02463748	GCA_000162455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/455/GCA_000162455.1_ASM16245v1	-	D17
Butyrivibrio fibrisolvens YRB2005	1280687	PRJNA185684	185684	Terrabacteria group	Firmicutes	4.6518	39.8	-	AUJA01	81	3936	3764	7/10/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02440828	GCA_000423985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/985/GCA_000423985.1_ASM42398v1	-	YRB2005
Actinomyces graevenitzii F0530	1321817	PRJNA198881	198881	Terrabacteria group	Actinobacteria	2.09095	57.7	-	AWSC01	29	1790	1658	9/10/13	4/9/17	Scaffold	Washington University	SAMN02436719	GCA_000466185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/185/GCA_000466185.1_ASM46618v1	-	F0530
Aerococcus viridans ATCC 11563 = CCUG 4311	655812	PRJNA38729	38729	Terrabacteria group	Firmicutes	2.00585	39.5	-	ADNT01	150	1892	1783	4/20/10	4/7/17	Contig	Baylor College of Medicine	SAMN00139312	GCA_000178435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/435/GCA_000178435.1_ASM17843v1	-	ATCC 11563
Anaerococcus vaginalis ATCC 51170	655811	PRJNA38727	38727	Terrabacteria group	Firmicutes	1.89177	29	-	ACXU01	6	1779	1692	8/21/09	4/7/17	Scaffold	Baylor College of Medicine	SAMN00120584	GCA_000163295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/295/GCA_000163295.1_ASM16329v1	-	ATCC 51170
Rhodomicrobium vannielii	1069	PRJNA317721	317721	Proteobacteria	Alphaproteobacteria	5.77863	65	-	MWLJ01	52	5189	5047	6/19/17	6/22/17	Scaffold	TU Berlin	SAMN06335527	GCA_002198685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/685/GCA_002198685.1_ASM219868v1	-	R_RK_2
Coraliomargarita akajimensis DSM 45221	583355	PRJNA33365	33365	PVC group	Verrucomicrobia	3.75077	53.6	chromosome:NC_014008.1/CP001998.1	-	1	3126	3054	4/5/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598501	GCA_000025905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/905/GCA_000025905.1_ASM2590v1	21304713	DSM 45221
Dickeya zeae Ech586	590409	PRJNA33667	33667	Proteobacteria	Gammaproteobacteria	4.81839	53.6	chromosome:NC_013592.1/CP001836.1	-	1	4310	4113	12/9/09	9/3/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598506	GCA_000025065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/065/GCA_000025065.1_ASM2506v1	-	Ech586
Lactobacillus coleohominis DSM 14060	887896	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.71624	40.8	-	AZEW01	964	1715	1715	11/6/15	11/6/15	Scaffold	Shanghai Majorbio	SAMN02369394	GCA_001435055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/055/GCA_001435055.1_ASM143505v1	26415554	DSM 14060
Parachlamydia acanthamoebae str. Hall's coccus	159254	PRJNA38363	38363	PVC group	Chlamydiae	2.97126	39	-	ACZE01	95	2603	2477	12/23/09	3/29/17	Contig	University of Lausanne	SAMN02471471	GCA_000176075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/075/GCA_000176075.1_ASM17607v1	20037647	Hall's coccus
Ochrobactrum intermedium M86	1234597	PRJNA178498	178498	Proteobacteria	Alphaproteobacteria	5.18869	57.9	-	AOGE01	148	5182	4791	1/23/13	5/19/17	Contig	National Centre for Cell Science	SAMN02470612	GCA_000332835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/835/GCA_000332835.1_ASM33283v1	23557353	M86
Streptomyces griseus subsp. griseus	67263	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.2026	73.3	-	JNZI01	135	6375	6079	7/1/14	3/11/17	Contig	University of Illinois	SAMN02645337	GCA_000717375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/375/GCA_000717375.1_ASM71737v1	-	NRRL B-2307
Thermococcus gammatolerans EJ3	593117	PRJNA33671	33671	Euryarchaeota	Thermococci	2.04544	53.6	chromosome:NC_012804.1/CP001398.1	-	1	2200	2117	6/12/09	8/21/17	Complete Genome	"IGM/ Universit Paris-Sud, France"	SAMN02603333	GCA_000022365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/365/GCA_000022365.1_ASM2236v1	19558674	EJ3; DSM 15229
Corynebacterium kroppenstedtii	161879	PRJNA246505	246505	Terrabacteria group	Actinobacteria	2.53574	56.8	-	LSCY01	9	2149	2065	2/8/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN03842619	GCA_001552955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/955/GCA_001552955.1_ASM155295v1	-	DNF00591
Silicibacter lacuscaerulensis ITI-1157	644107	PRJEB18277	355710	Proteobacteria	Alphaproteobacteria	3.50341	63	-	FQYJ01	19	3493	3382	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444404	GCA_900141625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/625/GCA_900141625.1_IMG-taxon_2698536695_annotated_assembly	-	ITI-1157
Ruminococcus flavefaciens MC2020	1410671	PRJNA223444	223444	Terrabacteria group	Firmicutes	3.12516	51.9	-	JNKE01	16	2758	2615	6/11/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02841181	GCA_000701945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/945/GCA_000701945.1_ASM70194v1	-	MC2020
Micromonospora aurantiaca	47850	PRJEB14465	326087	Terrabacteria group	Actinobacteria	7.37272	72.8	-	FMHX01	4	6675	6453	8/18/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488386	GCA_900090255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/090/255/GCA_900090255.1_IMG-taxon_2619619011_annotated_assembly	-	DSM 45487
Selenomonas noxia F0398	702437	PRJNA43115	43115	Terrabacteria group	Firmicutes	2.1134	55.7	-	ADGH01	13	2044	1931	11/2/11	4/7/17	Scaffold	Broad Institute	SAMN02463846	GCA_000234135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/135/GCA_000234135.1_Sele_noxi_F0398_V1	-	F0398
Arcanobacterium haemolyticum	28264	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.26628	56.5	-	JUZA01	26	2102	2009	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197840	GCA_001055535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/535/GCA_001055535.1_ASM105553v1	26230489	64_AHAE
Shewanella amazonensis SB2B	326297	PRJNA13385	13385	Proteobacteria	Gammaproteobacteria	4.30614	53.6	chromosome:NC_008700.1/CP000507.1	-	1	3828	3684	12/21/06	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02598298	GCA_000015245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/245/GCA_000015245.1_ASM1524v1	-	SB2B
Ochrobactrum pituitosum	571256	PRJNA357031	357031	Proteobacteria	Alphaproteobacteria	5.46737	53.5989	chromosome 1:NZ_CP018779.1/CP018779.1; chromosome 2:NZ_CP018782.1/CP018782.1; chromosome 3:NZ_CP018780.1/CP018780.1; plasmid pOAAA2:NZ_CP018781.1/CP018781.1	-	4	5105	4864	3/13/17	3/15/17	Complete Genome	Harvard University	SAMN06130960	GCA_002025625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/625/GCA_002025625.1_ASM202562v1	28275097	AA2
Cardiobacterium hominis	2718	PRJEB13157	335335	Proteobacteria	Gammaproteobacteria	2.64602	59	-	FKLO01	88	2525	2344	7/26/16	3/18/17	Contig	CHUV-UNIL	SAMEA3920025	GCA_900079085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/085/GCA_900079085.1_c_hominis_CHUV0807	-	CHUV0807
Lactobacillus amylolyticus DSM 11664	585524	PRJNA34615	34615	Terrabacteria group	Firmicutes	1.54081	38.3	-	ADNY01	73	1607	1403	4/23/10	4/7/17	Contig	Baylor College of Medicine	SAMN00262700	GCA_000178475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/475/GCA_000178475.1_ASM17847v1	-	DSM 11664
Pantoea ananatis	553	PRJNA310041	310041	Proteobacteria	Gammaproteobacteria	4.85786	53.5978	chromosome:NZ_CP014207.1/CP014207.1; plasmid unnamed:NZ_CP014208.1/CP014208.1	-	2	4541	4313	2/1/16	4/4/17	Complete Genome	"State Key Lab for Rice Biology, China National Rice Research Institute"	SAMN04445753	GCA_001543055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/055/GCA_001543055.1_ASM154305v1	-	R100
Lactobacillus vaginalis DSM 5837 = ATCC 49540	1423814	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.78747	40.5	-	AZGL01	149	1759	1653	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369417	GCA_001435915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/915/GCA_001435915.1_ASM143591v1	26415554	DSM 5837
Sphingobacterium spiritivorum ATCC 33300	525372	PRJNA31529	31529	FCB group	Bacteroidetes/Chlorobi group	5.23295	39.9	-	ACHB01	40	4628	4322	2/20/09	5/19/17	Scaffold	BCM	SAMN00002244	GCA_000159515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/515/GCA_000159515.1_ASM15951v1	-	ATCC 33300
Lactobacillus iners ATCC 55195	888801	PRJNA53061	53061	Terrabacteria group	Firmicutes	1.23899	32.8	-	AEPX01	7	1163	1075	12/27/10	3/30/17	Scaffold	Baylor College of Medicine	SAMN00216799	GCA_000185405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/405/GCA_000185405.1_ASM18540v1	-	ATCC 55195
Fusobacterium varium ATCC 27725	469618	PRJNA32423	32423	Fusobacteria	Fusobacteriia	3.2998	29.2	-	ACIE02	11	3096	2914	4/2/09	4/7/17	Scaffold	Broad Institute	SAMN02463688	GCA_000159915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/915/GCA_000159915.2_Fuso_varium_ATCC_27725_V2	-	ATCC 27725
Fusobacterium gonidiaformans ATCC 25563	469615	PRJNA32419	32419	Fusobacteria	Fusobacteriia	1.69833	32.4	-	ACET02	6	1707	1583	3/2/09	4/10/17	Scaffold	Broad Institute	SAMN02463686	GCA_000158835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/835/GCA_000158835.2_Fuso_gon_ATCC25563_V2	-	ATCC 25563
Fusobacterium ulcerans 12-1B	457404	PRJNA32471	32471	Fusobacteria	Fusobacteriia	3.72694	30.6	-	AGWJ02	8	3551	3414	1/12/12	4/8/17	Scaffold	Broad Institute	SAMN02596750	GCA_000242995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/995/GCA_000242995.2_Fusobacterium_sp_12_1B_V2	-	12_1B
Butyrivibrio crossotus	45851	PRJNA321218	321218	Terrabacteria group	Firmicutes	2.13059	37.4	-	MNRB01	44	2132	2009	12/23/16	12/23/16	Scaffold	None	SAMN05717233	GCA_001915735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/735/GCA_001915735.1_ASM191573v1	27819664	-
Helicobacter bilis ATCC 43879	613026	PRJNA32489	32489	Proteobacteria	delta/epsilon subdivisions	2.53052	34.8	-	ACDN02	9	2392	2160	3/9/09	4/2/17	Scaffold	Broad Institute	SAMN02463714	GCA_000158435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/435/GCA_000158435.2_Heli_bilis_ATCC43879_V2	25212613	ATCC 43879
Rhodococcus hoagii ATCC 33707	525370	PRJNA31525	31525	Terrabacteria group	Actinobacteria	5.25906	68.75	chromosome:NZ_CM001149.1/CM001149.1	ADNW02	1	10004	9805	5/5/10	6/5/17	Chromosome	BCM	SAMN00001487	GCA_000164155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/155/GCA_000164155.2_ASM16415v2	-	ATCC 33707
Turneriella parva DSM 21527	869212	PRJNA50821	50821	Spirochaetes	Spirochaetia	4.4093	53.5971	chromosome:NC_018020.1/CP002959.1; plasmid pTURPA.01:NC_018021.1/CP002960.1	-	2	4264	4134	6/12/12	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02232065	GCA_000266885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/885/GCA_000266885.1_ASM26688v1	-	DSM 21527
Anaerococcus hydrogenalis DSM 7454	561177	PRJNA30747	30747	Terrabacteria group	Firmicutes	1.88937	29.6	-	ABXA01	52	1884	1503	10/1/08	4/7/17	Contig	Washington University Genome Sequencing Center	SAMN00008758	GCA_000173355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/355/GCA_000173355.1_ASM17335v1	-	DSM 7454
Bifidobacterium gallicum DSM 20093 = LMG 11596	561180	PRJNA30751	30751	Terrabacteria group	Actinobacteria	2.0198	57.5	-	ABXB03	27	1589	1491	10/1/08	4/7/17	Contig	Washington University Genome Sequencing Center	SAMN02299421	GCA_000173375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/375/GCA_000173375.1_ASM17337v1	-	DSM 20093
Roseburia inulinivorans	360807	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.82709	41.6	-	CYXX01	93	3651	3403	10/1/15	4/11/17	Contig	SC	SAMEA3545295	GCA_001405535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/535/GCA_001405535.1_13414_6_71	-	2789STDY5608887
Hungatella hathewayi WAL-18680	742737	PRJNA46393	46393	Terrabacteria group	Firmicutes	5.69778	50	-	ADLN01	18	5197	4938	11/10/11	5/18/17	Scaffold	Broad Institute	SAMN02463855	GCA_000235505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/505/GCA_000235505.1_Clos_hath_WAL_18680_V1	-	WAL-18680
Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043	566552	PRJNA30749	30749	Terrabacteria group	Actinobacteria	2.05843	56.1	-	ABXY01	31	1745	1619	10/23/08	4/7/17	Contig	Washington University Genome Sequencing Center	SAMN00008795	GCA_000173455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/455/GCA_000173455.1_ASM17345v1	-	DSM 16992
Corynebacterium aurimucosum	169292	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.3556	58.9	-	JVXO01	48	2250	2152	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197202	GCA_001054195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/195/GCA_001054195.1_ASM105419v1	26230489	1237_CAUR
Corynebacterium striatum ATCC 6940	525268	PRJNA31449	31449	Terrabacteria group	Actinobacteria	2.82899	59	-	ACGE01	85	2570	2401	2/12/09	3/30/17	Scaffold	Baylor College of Medicine	SAMN00001507	GCA_000159135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/135/GCA_000159135.1_ASM15913v1	-	ATCC 6940
Corynebacterium accolens ATCC 49726	862512	PRJNA50523	50523	Terrabacteria group	Actinobacteria	2.46564	59.1	-	AEED01	35	2309	2079	8/26/10	4/7/17	Scaffold	Baylor College of Medicine	SAMN00139429	GCA_000146485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/146/485/GCA_000146485.1_ASM14648v1	-	ATCC 49726
Veillonella dispar	39778	PRJNA246511	246511	Terrabacteria group	Firmicutes	2.04549	38.6	-	LSDO01	58	1913	1803	2/8/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN04324900	GCA_001553315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/315/GCA_001553315.1_ASM155331v1	-	DNF00926
Selenomonas sputigena ATCC 35185	546271	PRJNA30489	30489	Terrabacteria group	Firmicutes	2.55945	57.1	-	ACKP02	6	2390	2264	4/24/09	4/7/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008859	GCA_000160495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/495/GCA_000160495.1_ASM16049v1	-	ATCC 35185
Anaerococcus lactolyticus S7-1-13	1284686	PRJNA187461	187461	Terrabacteria group	Firmicutes	1.93687	34.8	-	JRMW01	44	1838	1750	9/26/14	4/9/17	Contig	JCVI	SAMN02850926	GCA_000758765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/765/GCA_000758765.1_04_NF40_HMP1630v01	-	S7-1-13
Erwinia amylovora CFBP1430	665029	PRJNA46805	46805	Proteobacteria	Gammaproteobacteria	3.83383	53.5749	chromosome:NC_013961.1/FN434113.1; plasmid pEA29:NC_013957.1/FN434114.1	-	2	3605	3412	3/25/10	3/30/17	Complete Genome	Bielefeld Univ	SAMEA3138297	GCA_000091565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/091/565/GCA_000091565.1_ASM9156v1	20192826	CFPB1430
Staphylococcus warneri L37603	596319	PRJNA34083	34083	Terrabacteria group	Firmicutes	2.42565	32.8	-	ACPZ01	77	2356	2235	6/9/09	3/30/17	Contig	J. Craig Venter Institute	SAMN00002361	GCA_000175175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/175/GCA_000175175.1_ASM17517v1	-	L37603
Acinetobacter radioresistens SH164	575589	PRJNA38345	38345	Proteobacteria	Gammaproteobacteria	3.15801	41.6	-	ACPO01	18	3009	2895	10/23/09	3/30/17	Scaffold	Broad Institute	SAMN02463732	GCA_000162115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/115/GCA_000162115.1_ASM16211v1	23144699	SH164
Dorea formicigenerans 4_6_53AFAA	742765	PRJNA46407	46407	Terrabacteria group	Firmicutes	3.84358	40.4	-	ADLU01	75	3889	3477	9/9/11	4/7/17	Scaffold	Broad Institute	SAMN02463861	GCA_000225745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/745/GCA_000225745.1_Dorea_form_4_6_53AFAA_V1	-	4_6_53AFAA
Campylobacter gracilis RM3268	553220	PRJNA31021	31021	Proteobacteria	delta/epsilon subdivisions	2.25557	46.6	-	ACYG01	33	2248	2146	9/8/09	4/7/17	Contig	J. Craig Venter Institute	SAMN00000715	GCA_000175875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/875/GCA_000175875.1_ASM17587v1	-	RM3268
Gemella haemolysans M341	562981	PRJNA38763	38763	Terrabacteria group	Firmicutes	2.05344	30.8	-	ACRO01	27	1943	1788	4/13/11	4/7/17	Scaffold	Broad Institute	SAMN02595331	GCA_000204355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/355/GCA_000204355.1_Geme_haem_M341_V1	-	M341
Campylobacter showae RM3277	553219	PRJNA31019	31019	Proteobacteria	delta/epsilon subdivisions	2.07201	45.7	-	ACVQ01	33	2063	1981	8/5/09	4/7/17	Contig	J. Craig Venter Institute	SAMN00000722	GCA_000175655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/655/GCA_000175655.1_ASM17565v1	-	RM3277
Pantoea alhagi	1891675	PRJNA374633	374633	Proteobacteria	Gammaproteobacteria	4.3163	53.5399	chromosome:NZ_CP019706.1/CP019706.1; plasmid pPALTYR11Z:NZ_CP019707.1/CP019707.1	-	2	4103	3880	4/20/17	4/22/17	Complete Genome	Northwest A&F University	SAMN06329872	GCA_002101395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/395/GCA_002101395.1_ASM210139v1	-	LTYR-11Z
Thermobaculum terrenum ATCC BAA-798	525904	PRJNA29523	29523	Terrabacteria group	unclassified Terrabacteria group	3.10158	53.5397	chromosome 1:NC_013525.1/CP001825.1; chromosome 2:NC_013526.1/CP001826.1	-	2	2911	2826	11/23/09	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00017581	GCA_000025005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/005/GCA_000025005.1_ASM2500v1	21304745	ATCC BAA-798
Bacteroides cellulosilyticus DSM 14838	537012	PRJNA30027	30027	FCB group	Bacteroidetes/Chlorobi group	6.87014	42.7	-	ACCH01	66	5148	4653	1/22/09	5/18/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008759	GCA_000158035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/035/GCA_000158035.1_ASM15803v1	-	DSM 14838
Prevotella copri	165179	PRJNA393007	393007	FCB group	Bacteroidetes/Chlorobi group	3.92056	45.4	-	NMPZ01	88	3271	3084	7/24/17	7/28/17	Contig	Translational Health Science and Technology Institute	SAMN07313576	GCA_002224675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/675/GCA_002224675.1_ASM222467v1	-	Indica
Thermococcus thioreducens	277988	PRJNA274230	274230	Euryarchaeota	Thermococci	2.06593	53.5	chromosome:NZ_CP015105.1/CP015105.1	-	1	2320	2215	7/5/17	7/7/17	Complete Genome	Ecole Normale Superieure de Lyon	SAMN03324168	GCA_002214545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/545/GCA_002214545.1_ASM221454v1	-	OGL-20P
Parabacteroides johnsonii DSM 18315	537006	PRJNA30007	30007	FCB group	Bacteroidetes/Chlorobi group	4.7871	45.2	-	ABYH01	106	4015	3505	10/23/08	6/12/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008846	GCA_000156495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/495/GCA_000156495.1_ASM15649v1	-	DSM 18315
Gemella sanguinis M325	562983	PRJNA38783	38783	Terrabacteria group	Firmicutes	1.75611	29.8	-	ACRY02	5	1705	1550	4/13/11	4/8/17	Contig	Broad Institute	SAMN02595333	GCA_000204335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/335/GCA_000204335.2_Geme_sang_M325_V2	-	M325
Anaerococcus tetradius	33036	PRJNA272092	272092	Terrabacteria group	Firmicutes	2.01554	34.4	-	LRPM01	70	1887	1787	2/2/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN03842091	GCA_001546165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/165/GCA_001546165.1_ASM154616v1	-	MJR8151
Lactobacillus hilgardii DSM 20176 = ATCC 8290	1423757	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.60311	39.6	-	AZDF01	125	2565	2379	11/6/15	4/11/17	Contig	Shanghai Majorbio	SAMN02369502	GCA_001434655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/655/GCA_001434655.1_ASM143465v1	26415554	DSM 20176
Roseburia intestinalis	166486	PRJEB10915	297013	Terrabacteria group	Firmicutes	4.32243	42.4	-	CYXZ01	101	4045	3774	10/1/15	4/11/17	Contig	SC	SAMEA3545423	GCA_001406435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/435/GCA_001406435.1_14207_7_83	-	2789STDY5834960
Enterobacter cancerogenus YZ1	1260277	PRJNA180988	180988	Proteobacteria	Gammaproteobacteria	4.80881	55.5	-	ANIC01	11	4660	4459	12/31/12	4/2/17	Contig	BGI Research Institution	SAMN02469365	GCA_000478345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/345/GCA_000478345.1_ASM47834v1	23469334	YZ1
Actinomyces urogenitalis S6-C4	1284679	PRJNA187457	187457	Terrabacteria group	Actinobacteria	2.71344	68.9	-	JRMT01	65	2256	2139	9/26/14	4/9/17	Contig	JCVI	SAMN02850922	GCA_000758745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/745/GCA_000758745.1_04_NF40v01	-	S6-C4
Corynebacterium glucuronolyticum ATCC 51867	548477	PRJNA30957	30957	Terrabacteria group	Actinobacteria	2.80915	59.1	-	ABYP01	64	2503	2387	10/23/08	4/7/17	Scaffold	Baylor College of Medicine	SAMN00000629	GCA_000156595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/595/GCA_000156595.1_ASM15659v1	-	ATCC 51867
Mobiluncus curtisii subsp. curtisii ATCC 35241	585198	PRJNA34631	34631	Terrabacteria group	Actinobacteria	2.15297	55.6	-	AEEE01	8	1895	1813	8/20/10	4/7/17	Scaffold	Baylor College of Medicine	SAMN00117214	GCA_000146285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/146/285/GCA_000146285.1_ASM14628v1	-	ATCC 35241
Lactobacillus antri DSM 16041	525309	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.24184	51.1	-	AZDK01	92	2148	2023	11/6/15	4/11/17	Contig	Shanghai Majorbio	SAMN02369390	GCA_001435475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/475/GCA_001435475.1_ASM143547v1	26415554	DSM 16041
Corynebacterium amycolatum	43765	PRJNA339674	339674	Terrabacteria group	Actinobacteria	2.46026	59	-	MIFV01	41	2175	2082	9/8/16	4/13/17	Contig	Institute of Cellular and Intracellular Symbiosis Russian Academy of Sciences	SAMN05601680	GCA_001722255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/255/GCA_001722255.1_ASM172225v1	-	ICIS 53
Propionibacterium acidifaciens F0233	553198	PRJNA31003	31003	Terrabacteria group	Actinobacteria	3.01761	70.4	-	ACVN02	334	2657	2330	8/5/09	4/9/17	Contig	J. Craig Venter Institute	SAMN02436184	GCA_000478805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/805/GCA_000478805.1_PacidF0233v2.0	-	F0233
Atopobium rimae	1383	PRJNA222257	222257	Terrabacteria group	Actinobacteria	1.62994	49.3	-	JQCP01	9	1524	1458	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02797791	GCA_001438885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/885/GCA_001438885.1_ASM143888v1	26415554	DSM 7090
Corynebacterium diphtheriae	1717	PRJNA231221	231221	Terrabacteria group	Actinobacteria	2.489	53.5	chromosome:NZ_CP020410.1/CP020410.1	-	1	2375	2178	3/29/17	4/1/17	Complete Genome	US Food and Drug Administration 	SAMN04875534	GCA_002073375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/375/GCA_002073375.1_ASM207337v1	-	FDAARGOS_197
Corynebacterium matruchotii ATCC 33806	566549	PRJNA30771	30771	Terrabacteria group	Actinobacteria	2.99226	56.9	-	ACEB01	10	2703	2582	2/4/09	4/7/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008817	GCA_000158635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/635/GCA_000158635.1_ASM15863v1	-	ATCC 33806
Treponema vincentii ATCC 35580	596324	PRJNA34095	34095	Spirochaetes	Spirochaetia	2.51459	45.7	-	ACYH01	79	2306	2038	9/8/09	4/10/17	Contig	J. Craig Venter Institute	SAMN00001903	GCA_000175895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/895/GCA_000175895.1_ASM17589v1	-	ATCC 35580
Leptotrichia goodfellowii F0264	596323	PRJNA34093	34093	Fusobacteria	Fusobacteriia	2.28728	31.5	-	ADAD01	208	2255	2077	10/20/09	4/7/17	Contig	J. Craig Venter Institute	SAMN00004572	GCA_000176335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/335/GCA_000176335.1_ASM17633v1	-	F0264
Neisseria polysaccharea NS342	933269	PRJNA60865	60865	Proteobacteria	Betaproteobacteria	2.16953	51.4	-	AEPH01	288	2267	1936	12/29/10	4/7/17	Scaffold	"University of Maryland, College Park"	SAMN02471878	GCA_000193775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/775/GCA_000193775.2_ASM19377v1	-	NS342
Staphylococcus hominis	1290	PRJNA304219	304219	Terrabacteria group	Firmicutes	2.20822	31.3	-	LNTW01	74	2216	2087	3/14/17	3/16/17	Scaffold	Karolinska Institutet	SAMN04296816	GCA_002026385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/385/GCA_002026385.1_ASM202638v1	-	MMP2
Candidatus Tokpelaia hoelldoblerii	1902579	PRJNA343069	343069	Proteobacteria	Alphaproteobacteria	1.86828	53.5	chromosome:CP017315.1	-	1	1743	1685	2/21/17	2/21/17	Complete Genome	Uppsala University	SAMN05773104	GCA_002005325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/325/GCA_002005325.1_ASM200532v1	-	-
Corynebacterium diphtheriae	1717	PRJEB6403	251923	Terrabacteria group	Actinobacteria	2.46367	53.5	chromosome 1:NZ_LN831026.1/LN831026.1	-	1	2398	2196	3/22/15	4/4/17	Complete Genome	SC	SAMEA2517360	GCA_001457455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/455/GCA_001457455.1_NCTC11397	-	NCTC11397
Neisseria sicca ATCC 29256	547045	PRJNA30481	30481	Proteobacteria	Betaproteobacteria	2.83077	50.9	-	ACKO02	61	2886	2565	4/24/09	8/4/17	Contig	Washington University Genome Sequencing Center	SAMN00008842	GCA_000174655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/655/GCA_000174655.1_ASM17465v1	-	ATCC 29256
Neisseria mucosa ATCC 25996	546266	PRJNA30477	30477	Proteobacteria	Betaproteobacteria	2.57875	51.1	-	ACDX02	67	2606	2328	2/4/09	4/7/17	Contig	Washington University Genome Sequencing Center	SAMN00008841	GCA_000173875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/875/GCA_000173875.1_ASM17387v1	-	ATCC 25996
Staphylococcus caprae	29380	PRJNA273366	273366	Terrabacteria group	Firmicutes	2.74765	33.3	-	JXXP01	85	2670	2543	2/23/15	4/10/17	Contig	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN03290999	GCA_000931485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/485/GCA_000931485.1_ASM93148v1	26139720	9557
Neisseria flavescens SK114	596320	PRJNA34085	34085	Proteobacteria	Betaproteobacteria	2.20411	49.3	-	ACQV01	31	2185	1986	6/22/09	4/7/17	Contig	J. Craig Venter Institute	SAMN00001913	GCA_000175275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/275/GCA_000175275.1_ASM17527v1	-	SK114
Neisseria elongata subsp. glycolytica ATCC 29315	546263	PRJNA30471	30471	Proteobacteria	Betaproteobacteria	2.27595	54	-	ADBF01	153	2342	1845	11/9/09	4/7/17	Contig	Washington University Genome Sequencing Center	SAMN00008838	GCA_000176755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/755/GCA_000176755.2_ASM17675v1	-	ATCC 29315
Bacteroides coprophilus JCM 13816	1342725	PRJDB1136	245970	FCB group	Bacteroidetes/Chlorobi group	3.85266	45.7	-	BBIH01	158	3427	2650	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00017008	GCA_001315745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/745/GCA_001315745.1_ASM131574v1	-	JCM 13816
Providencia rettgeri Dmel1	1141663	PRJNA82575	82575	Proteobacteria	Gammaproteobacteria	4.34865	40.5004	chromosome:NZ_CM001774.1/CM001774.1; plasmid pPRET1:NZ_CM001856.1/CM001856.1	AJSB01	2	3947	3642	11/13/12	4/1/17	Chromosome	Cornell University	SAMN02429043	GCA_000314835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/835/GCA_000314835.2_ASM31483v2	23145767	Dmel1
Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505	547043	PRJNA30373	30373	Terrabacteria group	Actinobacteria	2.30481	56.3	-	ABXX02	36	1917	1750	10/23/08	3/30/17	Contig	Washington University Genome Sequencing Center	SAMN00008796	GCA_000173435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/435/GCA_000173435.1_ASM17343v1	-	DSM 20438
Paenibacillus stellifer	169760	PRJNA258354	258354	Terrabacteria group	Firmicutes	5.6588	53.5	chromosome:NZ_CP009286.1/CP009286.1	-	1	5232	4942	9/22/14	4/17/17	Complete Genome	Cornell University	SAMN02996608	GCA_000758685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/685/GCA_000758685.1_ASM75868v1	-	DSM 14472
Corynebacterium diphtheriae HC03	698969	PRJNA42415	42415	Terrabacteria group	Actinobacteria	2.47836	53.5	chromosome:NC_016787.1/CP003214.1	-	1	2351	2186	1/13/12	3/30/17	Complete Genome	"Center for Biotechnology, Bielefeld University"	SAMN02603073	GCA_000242775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/775/GCA_000242775.1_ASM24277v1	22505676	HC03
Enhydrobacter aerosaccus SK60	553217	PRJNA31335	31335	Proteobacteria	Alphaproteobacteria	2.70263	43.5	-	ACYI01	88	2616	2573	9/8/09	9/20/13	Contig	J. Craig Venter Institute	SAMN00001413	GCA_000175915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/915/GCA_000175915.1_ASM17591v1	-	SK60
Rothia dentocariosa M567	563032	PRJNA42539	42539	Terrabacteria group	Actinobacteria	2.53279	53.7	-	ADDW01	6	2217	2109	2/26/10	3/30/17	Scaffold	Broad Institute	SAMN02463840	GCA_000143585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/143/585/GCA_000143585.1_ASM14358v1	-	M567
Atopobium vaginae DSM 15829	525256	PRJNA31435	31435	Terrabacteria group	Actinobacteria	1.43053	42.7	-	ACGK02	6	1221	1158	2/18/09	4/7/17	Contig	Baylor College of Medecine	SAMN00001474	GCA_000159235.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/235/GCA_000159235.2_ASM15923v2	-	DSM 15829
Corynebacterium diphtheriae C7 (beta)	698963	PRJNA42401	42401	Terrabacteria group	Actinobacteria	2.49919	53.5	chromosome:NC_016801.1/CP003210.1	-	1	2444	2239	1/13/12	3/30/17	Complete Genome	"Center for Biotechnology, Bielefeld University"	SAMN02603067	GCA_000255175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/175/GCA_000255175.1_ASM25517v1	22505676	C7 (beta)
Peptoniphilus lacrimalis 315-B	596330	PRJNA34107	34107	Terrabacteria group	Firmicutes	1.69921	29.9	-	ADDO01	71	1596	1503	12/15/09	4/7/17	Contig	J. Craig Venter Institute	SAMN00008345	GCA_000176955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/955/GCA_000176955.1_ASM17695v1	-	315-B
Corynebacterium diphtheriae HC04	698970	PRJNA42417	42417	Terrabacteria group	Actinobacteria	2.48433	53.5	chromosome:NC_016788.1/CP003215.1	-	1	2367	2200	1/13/12	3/30/17	Complete Genome	"Center for Biotechnology, Bielefeld University"	SAMN02603074	GCA_000255195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/195/GCA_000255195.1_ASM25519v1	22505676	HC04
Peptostreptococcus anaerobius VPI 4330 = DSM 2949	1035196	PRJNA67203	67203	Terrabacteria group	Firmicutes	1.98845	36	-	AMEL01	91	1815	1679	12/10/12	4/1/17	Scaffold	Washington University Genome Center	SAMN02436860	GCA_000318115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/115/GCA_000318115.1_ASM31811v1	-	VPI 4330
Prevotella bivia	28125	PRJNA272110	272110	FCB group	Bacteroidetes/Chlorobi group	2.4593	39.6	-	LRQF02	127	2147	1998	2/2/16	4/5/17	Scaffold	The Genome Institute at Washington University	SAMN03854476	GCA_001546565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/565/GCA_001546565.2_ASM154656v2	-	GED7760C
Geobacter daltonii FRC-32	316067	PRJNA16263	16263	Proteobacteria	delta/epsilon subdivisions	4.3045	53.5	chromosome:NC_011979.1/CP001390.1	-	1	3879	3774	1/27/09	5/18/17	Complete Genome	US DOE Joint Genome Institute	SAMN00623045	GCA_000022265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/265/GCA_000022265.1_ASM2226v1	-	FRC-32
Mobiluncus mulieris ATCC 35239	871571	PRJNA51375	51375	Terrabacteria group	Actinobacteria	2.53363	54.9	-	AEET01	24	2296	2174	8/27/10	6/15/17	Scaffold	Baylor College of Medicine	SAMN00216800	GCA_000146895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/146/895/GCA_000146895.1_ASM14689v1	-	ATCC 35239
Porphyromonas uenonis 60-3	596327	PRJNA34101	34101	FCB group	Bacteroidetes/Chlorobi group	2.24288	52.5	-	ACLR01	250	1842	1686	4/29/09	4/7/17	Contig	J. Craig Venter Institute	SAMN00002220	GCA_000174775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/775/GCA_000174775.1_ASM17477v1	-	60-3
Lactobacillus ultunensis DSM 16047	525365	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.16177	35.9	-	AZFO01	105	2098	1960	11/6/15	4/11/17	Contig	Shanghai Majorbio	SAMN02369416	GCA_001436305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/305/GCA_001436305.1_ASM143630v1	26415554	DSM 16047
Bacteroides dorei DSM 17855	483217	PRJNA27831	27831	FCB group	Bacteroidetes/Chlorobi group	5.56622	42.1	-	ABWZ01	40	4662	4422	10/2/08	5/18/17	Scaffold	Washington University Genome Sequencing Center	SAMN00000029	GCA_000156075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/075/GCA_000156075.1_ASM15607v1	-	DSM 17855
Lactobacillus ruminis ATCC 25644	525362	PRJNA31499	31499	Terrabacteria group	Firmicutes	2.10874	43.7	-	ACGS02	7	2166	2015	2/19/09	3/30/17	Scaffold	BCM	SAMN00001480	GCA_000159375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/375/GCA_000159375.2_ASM15937v2	-	ATCC 25644
Lactobacillus jensenii JV-V16	525329	PRJNA31493	31493	Terrabacteria group	Firmicutes	1.60463	34.4	chromosome:NZ_CM000953.1/CM000953.1	ACGQ02	1	3015	2823	2/19/09	3/30/17	Chromosome	Baylor College of Medicine	SAMN00001502	GCA_000159335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/335/GCA_000159335.1_ASM15933v1	-	JV-V16
Bacteroides plebeius	310297	PRJNA321218	321218	FCB group	Bacteroidetes/Chlorobi group	3.01811	44.7	-	MNQR01	57	2471	2333	12/23/16	12/23/16	Scaffold	None	SAMN05717223	GCA_001915535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/535/GCA_001915535.1_ASM191553v1	27819664	-
Brevundimonas subvibrioides	74313	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	3.31227	67.7	-	NCEQ01	36	3265	3167	8/16/17	8/16/17	Contig	None	SAMN06622342	GCA_002280785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/785/GCA_002280785.1_ASM228078v1	-	-
Bacteroides eggerthii 1_2_48FAA	665953	PRJNA40009	40009	FCB group	Bacteroidetes/Chlorobi group	4.58648	44.7	-	ACWG01	41	3981	3698	1/4/11	5/18/17	Scaffold	Broad Institute	SAMN02463790	GCA_000185605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/605/GCA_000185605.1_ASM18560v1	-	1_2_48FAA
Bacteroides finegoldii CL09T03C10	997888	PRJNA64831	64831	FCB group	Bacteroidetes/Chlorobi group	5.11563	42.5	-	AGXW01	6	4287	4059	10/9/12	5/18/17	Scaffold	Broad Institute	SAMN02463931	GCA_000304195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/195/GCA_000304195.1_Bact_thet_CL09T03C10_V1	-	CL09T03C10
Olsenella uli DSM 7084	633147	PRJNA222257	222257	Terrabacteria group	Actinobacteria	2.05713	64.6	-	JQCO01	13	1821	1727	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02797808	GCA_001437585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/585/GCA_001437585.1_ASM143758v1	26415554	DSM 7084
Methanosaeta thermophila PT	349307	PRJNA15765	15765	Euryarchaeota	Methanomicrobia	1.87947	53.5	chromosome:CP000477.1	-	1	1781	1696	10/25/06	1/28/14	Complete Genome	US DOE Joint Genome Institute	SAMN02598350	GCA_000014945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/945/GCA_000014945.1_ASM1494v1	-	PT
Corynebacterium diphtheriae NCTC 13129	257309	PRJNA87	87	Terrabacteria group	Actinobacteria	2.48863	53.5	chromosome:NC_002935.2/BX248353.1	-	1	2380	2214	11/6/01	5/28/17	Complete Genome	Sanger Institute	SAMEA1705951	GCA_000195815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/815/GCA_000195815.1_ASM19581v1	14602910	NCTC 13129
Thermococcus eurythermalis	1505907	PRJNA251677	251677	Euryarchaeota	Thermococci	2.12616	53.4884	chromosome:NZ_CP008887.1/CP008887.1; plasmid unnamed:NZ_CP008888.1/CP008888.1	-	2	2297	2180	10/28/14	4/9/17	Complete Genome	Laboratory of Marine Oceanography	SAMN02838508	GCA_000769655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/655/GCA_000769655.1_ASM76965v1	25288278	A501
Bartonella grahamii ATCC 700132	1415777	PRJNA225844	225844	Proteobacteria	Alphaproteobacteria	2.19849	38	-	JACX01	66	1933	1698	1/10/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02585012	GCA_000518085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/085/GCA_000518085.1_ASM51808v1	-	ATCC 700132
Erwinia billingiae	182337	PRJNA290664	290664	Proteobacteria	Gammaproteobacteria	5.60168	55.1	-	LHXI01	30	5204	4774	8/18/15	4/10/17	Scaffold	Oregon State University	SAMN03894437	GCA_001269445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/445/GCA_001269445.1_ASM126944v1	26430039	OSU19-1
Bacterioplanes sanyensis	1249553	PRJNA394988	394988	Proteobacteria	Gammaproteobacteria	4.29373	53.4	chromosome:NZ_CP022530.1/CP022530.1	-	1	3952	3844	7/31/17	8/3/17	Complete Genome	King Abdullah University of Science and Technology	SAMN07372106	GCA_002237535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/535/GCA_002237535.1_ASM223753v1	-	NV9
Erwinia pyrifoliae DSM 12163	644651	PRJEA37877	37877	Proteobacteria	Gammaproteobacteria	4.07283	53.36	chromosome:NC_017390.1/FN392235.1; plasmid pEP2.6:NC_017391.1/FN392236.1; plasmid pEP3:NC_017388.1/FN392237.1; plasmid pEP36:NC_017392.1/FN392238.1; plasmid pEp5:NC_017389.1/FN392239.1	-	5	3896	3561	1/7/10	4/7/17	Chromosome	Agroscope Changins-Waedenswil ACW	SAMEA2272353	GCA_000026985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/985/GCA_000026985.1_ASM2698v1	20047678	DSM 12163
Pelobacter sp. SFB93	1842532	PRJNA319824	319824	Proteobacteria	delta/epsilon subdivisions	3.21847	53.4	chromosome:NZ_CP015519.1/CP015519.1	-	1	2924	2784	11/30/16	9/8/17	Complete Genome	US Geological Survey	SAMN04909703	GCA_001887775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/775/GCA_001887775.1_ASM188777v1	-	SFB93
Fusobacterium periodonticum ATCC 33693	546275	PRJNA30495	30495	Fusobacteria	Fusobacteriia	2.615	27.7	-	ACJY01	53	2568	2352	4/24/09	4/7/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008828	GCA_000160475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/475/GCA_000160475.1_ASM16047v1	-	ATCC 33693
Thermococcus sibiricus	172049	PRJNA278302	278302	Euryarchaeota	Thermococci	1.89036	40.2	-	LGFD01	107	2135	2135	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445129	GCA_001508065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/065/GCA_001508065.1_ASM150806v1	26787827	-
Thermotoga naphthophila	93930	PRJNA278302	278302	Thermotogae	Thermotogae	1.65441	45.9	-	LGFG01	269	1817	1817	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445132	GCA_001508125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/125/GCA_001508125.1_ASM150812v1	26787827	-
Corynebacterium ulcerans	65058	PRJNA278475	278475	Terrabacteria group	Actinobacteria	2.43457	53.4	chromosome:NZ_CP011095.1/CP011095.1	-	1	2204	2105	4/3/15	4/3/17	Complete Genome	Federal University of Minas Gerais	SAMN03418694	GCA_000968945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/945/GCA_000968945.1_ASM96894v1	-	131002
Acidaminococcus fermentans	905	PRJEB16602	349916	Terrabacteria group	Firmicutes	2.28055	56.1	-	FNOP01	40	2138	1994	10/22/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216495	GCA_900107075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/075/GCA_900107075.1_IMG-taxon_2654588173_annotated_assembly	-	WCC6
Dickeya zeae EC1	1427366	PRJNA229184	229184	Proteobacteria	Gammaproteobacteria	4.53236	53.4	chromosome:NZ_CP006929.1/CP006929.1	-	1	4053	3837	1/7/15	4/2/17	Complete Genome	"Department of Plant Pathology, South China Agricultural University"	SAMN03275446	GCA_000816045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/045/GCA_000816045.1_ASM81604v1	-	EC1
Streptomyces griseoflavus	35619	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.06879	72.1	-	LGUW01	382	7862	7404	8/19/15	3/11/17	Contig	University of Illinois	SAMN02900591	GCA_001270585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/585/GCA_001270585.1_ASM127058v1	-	NRRL B-1830
Streptomyces lividans 1326	1200984	PRJNA168962	168962	Terrabacteria group	Actinobacteria	8.49676	72.0492	chromosome:NZ_CM001889.1/CM001889.1	APVM01	1	7862	7297	5/30/13	3/12/17	Chromosome	CINVESTAV	SAMN02469606	GCA_000403665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/665/GCA_000403665.1_Streptomyces_lividans_1326	23709624	1326
Streptomyces viridochromogenes Tue57	1160705	PRJNA89157	89157	Terrabacteria group	Actinobacteria	9.68743	71	-	AMLP01	379	8781	8074	1/22/13	5/19/17	Contig	University of Freiburg	SAMN00811239	GCA_000332625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/625/GCA_000332625.1_STVIR_1.0	23788550	Tue57
Corynebacterium ulcerans 0102	996634	PRJDA63647	63647	Terrabacteria group	Actinobacteria	2.57919	53.4	chromosome:NC_018101.1/AP012284.1	-	1	2368	2261	7/3/12	3/30/17	Complete Genome	National Institute of Infectious Diseases	SAMD00012381	GCA_000306825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/825/GCA_000306825.1_ASM30682v1	22583953	102
[Clostridium] papyrosolvens C7	1330534	PRJNA201398	201398	Terrabacteria group	Firmicutes	4.40093	37.1	-	ATAY01	104	3902	3731	7/10/13	4/8/17	Contig	Weizmann Institute of Science	SAMN02469732	GCA_000421965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/965/GCA_000421965.1_CpC7	24029755	C7
Brucella neotomae 5K33	520456	PRJNA243897	243897	Proteobacteria	Alphaproteobacteria	3.32946	57.2	-	JMSC01	1	3370	3020	8/19/14	4/9/17	Scaffold	Los Alamos National Laboratory	SAMN02768006	GCA_000742255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/255/GCA_000742255.1_ASM74225v1	25237024	5K33
Corynebacterium diphtheriae HC01	698967	PRJNA42409	42409	Terrabacteria group	Actinobacteria	2.42715	53.4	chromosome:NC_016786.1/CP003212.1	-	1	2327	2150	1/13/12	3/30/17	Complete Genome	"Center for Biotechnology, Bielefeld University"	SAMN02603071	GCA_000255235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/235/GCA_000255235.1_ASM25523v1	22505676	HC01
Escherichia fergusonii ECD227	981367	PRJNA62485	62485	Proteobacteria	Gammaproteobacteria	4.86611	49.9466	chromosome:NZ_CM001142.1/CM001142.1; plasmid pECD227_112:NZ_CM001143.1/CM001143.1; plasmid pECD227_113:NZ_CM001144.1/CM001144.1; plasmid pECD227_46:NZ_CM001145.1/CM001145.1; plasmid pECD227_5:NZ_CM001146.1/CM001146.1; plasmid pECD227_80:NZ_CM001147.1/CM001147.1	AEVY01	6	4948	4648	3/4/11	2/22/17	Chromosome	"McGill University, Canada"	SAMN02470542	GCA_000191665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/665/GCA_000191665.1_ecmda7	-	ECD227
Corynebacterium diphtheriae VA01	698971	PRJNA42421	42421	Terrabacteria group	Actinobacteria	2.39544	53.4	chromosome:NC_016790.1/CP003217.1	-	1	2278	2111	1/13/12	3/30/17	Complete Genome	"Center for Biotechnology, Bielefeld University"	SAMN02603076	GCA_000255255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/255/GCA_000255255.1_ASM25525v1	22505676	VA01
Corynebacterium diphtheriae 241	698966	PRJNA42407	42407	Terrabacteria group	Actinobacteria	2.42655	53.4	chromosome:NC_016782.1/CP003207.1	-	1	2324	2142	1/10/12	3/30/17	Complete Genome	"Center for Biotechnology, Bielefeld University"	SAMN02603070	GCA_000241895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/895/GCA_000241895.1_ASM24189v1	22505676	241
Leptotrichia hofstadii DSM 21651	1122171	PRJNA185361	185361	Fusobacteria	Fusobacteriia	2.56074	30.5	-	AUAY01	18	2429	2320	7/15/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440610	GCA_000428965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/965/GCA_000428965.1_ASM42896v1	-	DSM 21651
Clostridium cellulovorans 743B	573061	PRJNA37295	37295	Terrabacteria group	Firmicutes	5.12304	31.1	-	BABR01	546	-	-	3/16/10	9/16/15	Contig	Mie University	SAMN00008864	GCA_000180115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/180/115/GCA_000180115.1_ASM18011v1	19948806	743B
Actinobacillus minor NM305	637911	PRJNA36657	36657	Proteobacteria	Gammaproteobacteria	2.42526	39.3	-	ACQL01	197	2346	2221	6/19/09	4/7/17	Contig	McGill University	SAMN02470284	GCA_000175195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/195/GCA_000175195.1_ASM17519v1	19819087	NM305
Streptomyces roseosporus NRRL 11379	457430	PRJNA32281	32281	Terrabacteria group	Actinobacteria	7.85194	71.3	-	ABYX02	1	7071	6534	12/12/08	3/9/17	Scaffold	Broad Institute	SAMN02595236	GCA_000156695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/695/GCA_000156695.2_ASM15669v2	-	NRRL 11379
Jonquetella anthropi E3_33 E1	645512	PRJNA33111	33111	Synergistetes	Synergistia	1.79006	58.9	-	ACOO02	2	1728	1632	6/4/09	4/10/17	Scaffold	WUGSC	SAMN00008831	GCA_000161995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/995/GCA_000161995.1_ASM16199v1	-	E3_33 E1
Acidovorax delafieldii 2AN	573060	PRJNA32605	32605	Proteobacteria	Betaproteobacteria	4.84209	65	-	ACQT01	638	4649	4062	6/22/09	5/18/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN02441799	GCA_000175235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/235/GCA_000175235.1_ASM17523v1	-	2AN
Vulcanisaeta distributa JCM 11216	1293043	PRJDB790	243702	TACK group	Crenarchaeota	2.42282	46	-	BBBI01	65	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000415	GCA_001315985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/985/GCA_001315985.1_ASM131598v1	-	JCM 11216
Serratia symbiotica str. Tucson	914128	PRJNA59889	59889	Proteobacteria	Gammaproteobacteria	2.78922	51.7	-	AENX01	388	2488	1715	1/20/11	4/7/17	Scaffold	The University of Arizona	SAMN02471170	GCA_000186485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/485/GCA_000186485.2_ASM18648v1	21266540	Tucson
Corynebacterium ulcerans BR-AD22	945712	PRJNA61803	61803	Terrabacteria group	Actinobacteria	2.60637	53.4	chromosome:NC_015683.1/CP002791.1	-	1	2407	2291	6/2/11	3/30/17	Complete Genome	"Center for Biotechnology, Bielefeld University"	SAMN02603080	GCA_000215665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/665/GCA_000215665.1_ASM21566v1	21801446	BR-AD22
Streptomyces albus subsp. albus	67257	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.63334	72.7	-	JODR01	104	6481	6134	7/15/14	3/11/17	Contig	University of Illinois	SAMN02645215	GCA_000725885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/885/GCA_000725885.1_ASM72588v1	-	NRRL B-1811
Erwinia pyrifoliae Ep1/96	634499	PRJEA34779	34779	Proteobacteria	Gammaproteobacteria	4.07285	53.3602	chromosome:NC_012214.1/FP236842.1; plasmid pEP03:NC_013264.1/FP236827.1; plasmid pEP05:NC_013265.1/FP236828.1; plasmid pEP2.6:NC_013954.1/FP928999.1; plasmid pEP36:NC_013263.1/FP236829.1	-	5	3895	3578	3/12/09	4/7/17	Complete Genome	Max Planck Society	SAMEA2272200	GCA_000027265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/027/265/GCA_000027265.1_ASM2726v1	20565991	Ep1/96
Erwinia tasmaniensis Et1/99	465817	PRJEA20585	20585	Proteobacteria	Gammaproteobacteria	4.06786	53.3601	chromosome:NC_010694.1/CU468135.1; plasmid pET09:NC_010695.1/CU468128.1; plasmid pET35:NC_010696.1/CU468130.1; plasmid pET45:NC_010699.1/CU468132.1; plasmid pET46:NC_010693.1/CU468133.1; plasmid pET49:NC_010697.1/CU468131.1	-	6	3818	3595	5/13/08	4/17/17	Complete Genome	Max Planck Institute for Molecular Genetics (MPIMG)	SAMEA2272215	GCA_000026185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/185/GCA_000026185.1_ASM2618v1	18462403	Et1/99
Lactobacillus crispatus JV-V01	491076	PRJNA30641	30641	Terrabacteria group	Firmicutes	2.22172	37.7	-	ACKR01	86	2125	1979	4/27/09	3/30/17	Scaffold	Baylor College of Medicine	SAMN00002229	GCA_000160515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/515/GCA_000160515.1_ASM16051v1	-	JV-V01
Bacillus vallismortis DV1-F-3	1051502	PRJNA68565	68565	Terrabacteria group	Firmicutes	3.87621	43.8	-	AFSH01	80	4093	3659	1/25/12	4/10/17	Scaffold	Institute for Genome Sciences	SAMN02435815	GCA_000245315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/315/GCA_000245315.1_ASM24531v1	22493193	DV1-F-3
Natrialba magadii ATCC 43099	547559	PRJNA174949	174949	Euryarchaeota	Halobacteria	4.4163	61.1	-	AOHS01	66	4215	4025	2/4/13	5/19/17	Contig	"University of California, Davis"	SAMN02471679	GCA_000337875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/875/GCA_000337875.1_ASM33787v1	25393412	MS-3
Pectobacterium wasabiae CFBP 3304	1175631	PRJNA159625	159625	Proteobacteria	Gammaproteobacteria	5.1493	50.6	-	AKVS01	73	4792	4560	8/17/12	5/19/17	Contig	University of Helsinki	SAMN02471791	GCA_000291725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/725/GCA_000291725.1_PecWas1.0	23133391	CFBP 3304
Acetobacter pasteurianus subsp. paradoxus	940260	PRJNA317328	317328	Proteobacteria	Alphaproteobacteria	3.21603	53.3405	chromosome:NZ_CP015168.1/CP015168.1; plasmid unnamed1:NZ_CP015169.1/CP015169.1; plasmid unnamed2:NZ_CP015170.1/CP015170.1; plasmid unnamed3:NZ_CP015171.1/CP015171.1	-	4	3163	2722	10/14/16	4/10/17	Complete Genome	Chung-Ang University	SAMN04605655	GCA_001766255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/255/GCA_001766255.1_ASM176625v1	-	LMG 1591
Acetobacter pasteurianus subsp. pasteurianus	481145	PRJNA389952	389952	Proteobacteria	Alphaproteobacteria	3.40882	53.3084	chromosome:NZ_CP021922.1/CP021922.1; plasmid pAP1468-1:NZ_CP021923.1/CP021923.1; plasmid pAP1468-2:NZ_CP021924.1/CP021924.1; plasmid pAP1468-3:NZ_CP021925.1/CP021925.1	-	4	3267	2981	6/20/17	6/22/17	Complete Genome	Microbial Institute for Fermentation Industry	SAMN07211335	GCA_002202135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/135/GCA_002202135.1_ASM220213v1	-	SRCM101468
Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)	572265	PRJNA31259	31259	Proteobacteria	Gammaproteobacteria	2.16936	40.4361	chromosome:NC_012751.1/CP001277.1; plasmid pHD5AT:NC_012752.1/CP001278.1	-	2	2180	1915	5/5/09	5/28/17	Chromosome	University of Arizona	SAMN02604135	GCA_000021705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/705/GCA_000021705.1_ASM2170v1	19451630	T5A
Corynebacterium ulcerans	65058	PRJEB6403	251923	Terrabacteria group	Actinobacteria	2.45376	53.3	chromosome 1:NZ_LT906443.1/LT906443.1	-	1	2233	2137	8/15/17	8/28/17	Complete Genome	SC	SAMEA4504038	GCA_900187135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/135/GCA_900187135.1_51485_C02	-	NCTC7910
Teredinibacter turnerae T0609	1206095	PRJNA169685	169685	Proteobacteria	Gammaproteobacteria	5.06906	51.2	-	ARCX01	49	4258	4099	4/19/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02441039	GCA_000372925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/925/GCA_000372925.1_ASM37292v1	-	T0609
Limnohabitans sp. 103DPR2	1678129	PRJNA282432	282432	Proteobacteria	Betaproteobacteria	2.9488	53.3	chromosome:NZ_CP011834.1/CP011834.1	-	1	2838	2778	10/26/15	4/11/17	Complete Genome	Chungnam National University	SAMN03569612	GCA_001412575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/575/GCA_001412575.1_ASM141257v1	-	103DPR2
Corynebacterium ulcerans	65058	PRJNA273964	273964	Terrabacteria group	Actinobacteria	2.48332	53.3	chromosome:NZ_CP010818.1/CP010818.1	-	1	2262	2151	9/14/15	4/4/17	Complete Genome	Federal University of Minas Gerais	SAMN03316967	GCA_001281445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/445/GCA_001281445.1_ASM128144v1	-	131001
Pseudogulbenkiania ferrooxidans EGD-HP2	1388764	PRJNA215707	215707	Proteobacteria	Betaproteobacteria	4.80141	64.2	-	AVPH01	301	4607	4170	8/29/13	4/8/17	Scaffold	National Environmental Engineering Research Institute-CSIR	SAMN02469687	GCA_000462205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/205/GCA_000462205.1_GS_De_Novo_Assembly	24371207	EGD-HP2
Photorhabdus asymbiotica subsp. australis DSM 17609	1122960	PRJNA235133	235133	Proteobacteria	Gammaproteobacteria	4.80031	42.1	-	JONO01	132	4364	3963	6/24/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02787039	GCA_000711895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/895/GCA_000711895.1_ASM71189v1	-	DSM 17609
Bacillus pseudomycoides	64104	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.84966	35.4	-	MUAQ01	261	6167	5633	3/3/17	3/6/17	Contig	Cornell University	SAMN05953540	GCA_002014615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/615/GCA_002014615.1_ASM201461v1	-	FSL H8-0534
Nitrosospira briensis C-128	1266925	PRJNA183056	183056	Proteobacteria	Betaproteobacteria	3.21011	53.3	chromosome:NZ_CP012371.1/CP012371.1	-	1	2958	2826	8/14/15	4/10/17	Complete Genome	DOE Joint Genome Institute	SAMN02744081	GCA_000619905.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/905/GCA_000619905.2_ASM61990v2	-	C-128
Variovorax paradoxus 110B	1157708	PRJNA185299	185299	Proteobacteria	Betaproteobacteria	7.51589	67.7	-	ARNA01	48	6975	6797	4/23/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02440495	GCA_000382045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/045/GCA_000382045.1_ASM38204v1	-	110B
Streptococcus equinus ATCC 700338	864569	PRJNA50519	50519	Terrabacteria group	Firmicutes	2.08308	37.4	-	AEEL01	10	2055	1866	8/24/10	4/6/17	Scaffold	Baylor College of Medicine	SAMN00117534	GCA_000146405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/146/405/GCA_000146405.1_ASM14640v1	-	ATCC 700338
Acetobacter pasteurianus	438	PRJNA242487	242487	Proteobacteria	Alphaproteobacteria	2.80615	53.3	chromosome:NZ_CP012111.1/CP012111.1	-	1	2706	2508	7/21/15	4/3/17	Complete Genome	Zhejiang Gongshang University	SAMN02709032	GCA_001183745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/745/GCA_001183745.1_ASM118374v1	-	Ab3
Treponema primitia ZAS-1	717227	PRJNA45801	45801	Spirochaetes	Spirochaetia	3.79029	50.8	-	AEEA01	192	3409	3258	8/3/11	4/8/17	Contig	California Institute of Technology	SAMN02469408	GCA_000297095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/095/GCA_000297095.1_ASM29709v1	-	ZAS-1
Yersinia rohdei ATCC 43380	527004	PRJNA29767	29767	Proteobacteria	Gammaproteobacteria	4.31748	47	-	ACCD01	141	3879	3703	6/1/09	5/19/17	Contig	Naval Medical Research Center	SAMN00005360	GCA_000173775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/775/GCA_000173775.1_ASM17377v1	-	ATCC 43380
Yersinia aldovae ATCC 35236	527002	PRJNA29741	29741	Proteobacteria	Gammaproteobacteria	4.30493	47.7	-	ACCB01	210	3965	3571	6/1/09	5/19/17	Contig	Naval Medical Research Center	SAMN00005136	GCA_000173735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/735/GCA_000173735.1_ASM17373v1	-	ATCC 35236
Clostridium carboxidivorans P7	536227	PRJNA29495	29495	Terrabacteria group	Firmicutes	4.40797	29.7	-	ADEK01	33	4068	3845	5/10/10	6/15/17	Scaffold	Mississippi State University	SAMN02469315	GCA_000163855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/855/GCA_000163855.1_ASM16385v1	20729368	P7
Corynebacterium ulcerans FRC58	1408268	PRJNA222503	222503	Terrabacteria group	Actinobacteria	2.5426	53.3	chromosome:NZ_CP011913.1/CP011913.1	-	1	2331	2227	6/26/15	4/3/17	Complete Genome	Federal University of Para	SAMN02471303	GCA_000499805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/805/GCA_000499805.2_ASM49980v2	24407640	FRC58
Corynebacterium ulcerans	65058	PRJNA263610	263610	Terrabacteria group	Actinobacteria	2.46644	53.3	chromosome:NZ_CP009716.1/CP009716.1	-	1	2233	2130	10/28/14	4/2/17	Complete Genome	Federal University of Minas Gerais	SAMN03104569	GCA_000769635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/635/GCA_000769635.1_ASM76963v1	-	5146
Corynebacterium ulcerans FRC11	1006579	PRJNA263376	263376	Terrabacteria group	Actinobacteria	2.44283	53.3	chromosome:NZ_CP009622.1/CP009622.1	-	1	2208	2112	10/22/14	4/2/17	Complete Genome	Federal University of Minas Gerais	SAMN03099770	GCA_000767685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/685/GCA_000767685.1_ASM76768v1	25767241	FRC11
Corynebacterium ulcerans	65058	PRJNA260630	260630	Terrabacteria group	Actinobacteria	2.48434	53.3	chromosome:NZ_CP009500.1/CP009500.1	-	1	2256	2149	10/20/14	4/2/17	Complete Genome	Federal University of Minas Gerais	SAMN03025288	GCA_000767415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/415/GCA_000767415.1_ASM76741v1	25428977	210932
Candidatus Accumulibacter phosphatis	327160	PRJNA245054	245054	Proteobacteria	Betaproteobacteria	4.26267	61.1	-	LBIV01	369	-	-	5/1/15	5/1/15	Contig	The University of Hong Kong	SAMN02731376	GCA_000987395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/987/395/GCA_000987395.1_ASM98739v1	-	-
Corynebacterium ulcerans 809	945711	PRJNA61801	61801	Terrabacteria group	Actinobacteria	2.5021	53.3	chromosome:NC_017317.1/CP002790.1	-	1	2275	2176	6/2/11	3/30/17	Complete Genome	"Center for Biotechnology, Bielefeld University"	SAMN02603079	GCA_000215645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/645/GCA_000215645.1_ASM21564v1	21801446	809
Caldicellulosiruptor bescii	31899	PRJNA371179	371179	Terrabacteria group	Firmicutes	2.93497	35.1	-	NPJY01	3	2857	2607	8/10/17	8/12/17	Contig	DOE Joint Genome Institute	SAMN06296433	GCA_002245875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/875/GCA_002245875.1_ASM224587v1	-	RKCB122
Thioalkalivibrio sulfidiphilus	1033854	PRJNA178487	178487	Proteobacteria	Gammaproteobacteria	3.05302	65.2	-	ARJH01	69	2995	2834	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441672	GCA_000377945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/945/GCA_000377945.1_ASM37794v1	-	ALJ17
gamma proteobacterium HdN1	83406	PRJEA46849	46849	Proteobacteria	Gammaproteobacteria	4.58746	53.3	chromosome:NC_014366.1/FP929140.1	-	1	3892	3771	7/29/10	5/19/17	Complete Genome	Max Planck Society	SAMEA2272402	GCA_000198515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/198/515/GCA_000198515.1_ASM19851v1	-	-
Pantoea ananatis LMG 5342	1123863	PRJEA78277	78277	Proteobacteria	Gammaproteobacteria	4.90814	53.2829	chromosome:NC_016816.1/HE617160.1; plasmid pPANA10:NC_016817.1/HE617161.1	-	2	4619	4406	12/21/11	3/30/17	Complete Genome	Center for Biotechnology	SAMEA2272583	GCA_000283875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/875/GCA_000283875.1_ASM28387v1	22374951	LMG 5342
Brevibacillus brevis X23	1200792	PRJNA168657	168657	Terrabacteria group	Firmicutes	6.58949	46.7925	plasmid pLS30:NZ_AKYF01000029.1/AKYF01000029.1	AKYF01	29	6396	6134	9/14/12	5/18/17	Contig	Hunan Agricultural University	SAMN02469906	GCA_000296715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/715/GCA_000296715.1_bgi_v1	23144389	X23
[Eubacterium] rectale	39491	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.27506	41	-	CYYW01	89	3178	2973	10/1/15	4/4/17	Contig	SC	SAMEA3545268	GCA_001404855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/855/GCA_001404855.1_13414_6_44	-	2789STDY5608860
Candidatus Riesia pediculicola	401619	PRJNA295781	295781	Proteobacteria	Gammaproteobacteria	0.582126	28.5904	chromosome:NZ_CP012841.1/CP012841.1; plasmid unnamed:NZ_CP012840.1/CP012840.1	-	2	536	492	3/29/17	4/1/17	Chromosome	University of Illinois Urbana-Champaign	SAMN04088561	GCA_002073915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/915/GCA_002073915.1_ASM207391v1	-	HHAC
Corynebacterium ulcerans	65058	PRJNA260628	260628	Terrabacteria group	Actinobacteria	2.50943	53.2536	chromosome:NZ_CP009583.1/CP009583.1; plasmid pCul210931:NZ_CP009584.1/CP009584.1	-	2	2310	2203	10/22/14	4/2/17	Complete Genome	Federal University of Minas Gerais	SAMN03025287	GCA_000767645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/645/GCA_000767645.1_ASM76764v1	-	210931
Bacillus pseudofirmus	79885	PRJNA357290	357290	Terrabacteria group	Firmicutes	5.28087	36.7	-	MSLR01	83	5111	4792	1/5/17	4/16/17	Contig	"California State University, Fresno"	SAMN06140725	GCA_001937355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/355/GCA_001937355.1_ASM193735v1	-	MRML5
Streptomyces pristinaespiralis ATCC 25486	457429	PRJNA28553	28553	Terrabacteria group	Actinobacteria	8.13338	70.4262	chromosome:NZ_CM000950.1/CM000950.1	ABJI02	1	7176	6207	2/28/08	5/19/17	Chromosome	Broad Institute	SAMN02595222	GCA_000154945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/945/GCA_000154945.1_ASM15494v1	-	ATCC 25486
Acetobacter pasteurianus subsp. ascendens	481146	PRJNA317327	317327	Proteobacteria	Alphaproteobacteria	2.99922	53.2047	chromosome:NZ_CP015164.1/CP015164.1; plasmid unnamed1:NZ_CP015165.1/CP015165.1; plasmid unnamed2:NZ_CP015166.1/CP015166.1; plasmid unnamed3:NZ_CP015167.1/CP015167.1	-	4	2940	2561	10/14/16	4/10/17	Complete Genome	Chung-Ang University	SAMN04605654	GCA_001766235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/235/GCA_001766235.1_ASM176623v1	-	LMG 1590
Ochrobactrum sp. A44	271865	PRJNA391243	391243	Proteobacteria	Alphaproteobacteria	5.64529	53.1734	chromosome 1:NZ_CP022604.1/CP022604.1; chromosome 2:NZ_CP022603.1/CP022603.1; plasmid unnamed1:NZ_CP022605.1/CP022605.1; plasmid unnamed2:NZ_CP022602.1/CP022602.1	-	4	5398	5137	8/30/17	9/1/17	Complete Genome	Intercollegiate Faculty of Biotechnology UG&MUG	SAMN07259827	GCA_002278035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/035/GCA_002278035.1_ASM227803v1	-	A44
Thermus aquaticus Y51MC23	498848	PRJNA28589	28589	Terrabacteria group	Deinococcus-Thermus	2.33819	68	-	ABVK02	22	2542	2325	8/15/08	4/7/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN02441811	GCA_000173055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/055/GCA_000173055.1_ASM17305v1	-	Y51MC23
Oscillibacter valericigenes Sjm18-20	693746	PRJNA41823	41823	Terrabacteria group	Firmicutes	4.47062	53.1645	chromosome:NC_016048.1/AP012044.1; plasmid pOBV01:NC_016046.1/AP012045.1	-	2	4473	4205	10/1/11	4/17/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00061111	GCA_000283575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/575/GCA_000283575.1_ASM28357v1	23408234	Sjm18-20
Acetobacter pasteurianus IFO 3283-01-42C	634458	PRJDA31141	31141	Proteobacteria	Alphaproteobacteria	3.24799	53.1587	chromosome:NC_017150.1/AP011163.1; plasmid pAPA42C_011:NC_017104.1/AP011164.1; plasmid pAPA42C_020:NC_017105.1/AP011165.1; plasmid pAPA42C_030:NC_017151.1/AP011166.1; plasmid pAPA42C_040:NC_017106.1/AP011167.1; plasmid pAPA42C_050:NC_017107.1/AP011168.1; plasmid pAPA42C_060:NC_017152.1/AP011169.1	-	7	3081	2859	8/27/09	4/10/17	Complete Genome	Acetobacter pasteurianus genome sequencing consortium	SAMD00060949	GCA_000010945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/945/GCA_000010945.1_ASM1094v1	19638423	IFO 3283 substr. IFO 3283-01-42C
Bordetella petrii J49	935860	PRJNA202366	202366	Proteobacteria	Betaproteobacteria	4.20772	65.4	-	JAEJ01	52	3971	3866	1/10/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02584960	GCA_000518845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/845/GCA_000518845.1_ASM51884v1	-	J49
Halocynthiibacter arcticus	1579316	PRJNA269208	269208	Proteobacteria	Alphaproteobacteria	4.37612	53.1521	chromosome:NZ_CP014327.1/CP014327.1; plasmid unnamed:NZ_CP014328.1/CP014328.1	-	2	4282	3908	2/25/16	4/12/17	Complete Genome	Korea Polar Research Institute	SAMN03252591	GCA_000812665.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/665/GCA_000812665.2_ASM81266v2	-	PAMC 20958
Citrobacter amalonaticus	35703	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.08387	53.1318	chromosome:NZ_CP014070.1/CP014070.1; plasmid unnamed:NZ_CP014069.1/CP014069.1	-	2	5018	4627	2/11/16	4/4/17	Complete Genome	US Food and Drug Administration 	SAMN03996309	GCA_001558935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/935/GCA_001558935.1_ASM155893v1	-	FDAARGOS_165
Thermococcus profundus	49899	PRJNA274230	274230	Euryarchaeota	Thermococci	2.04314	53.125	chromosome:NZ_CP014862.1/CP014862.1; plasmid unnamed:NZ_CP014863.1/CP014863.1	-	2	2158	2075	7/5/17	7/7/17	Complete Genome	Ecole Normale Superieure de Lyon	SAMN03324163	GCA_002214585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/585/GCA_002214585.1_ASM221458v1	-	DT 5432
Thermosipho africanus H17ap60334	1161912	PRJNA89449	89449	Thermotogae	Thermotogae	2.08355	30.6	-	AJIP01	49	2133	1852	10/1/12	4/8/17	Contig	University of Alberta	SAMN02471523	GCA_000300715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/715/GCA_000300715.1_ASM30071v1	-	H17ap60334
Methanoculleus marisnigri	2198	PRJNA278302	278302	Euryarchaeota	Methanomicrobia	1.59282	62.3	-	LGGD01	304	1863	1863	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445157	GCA_001509255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/255/GCA_001509255.1_ASM150925v1	26787827	-
Mycoplasma leachii 99/014/6	866629	PRJEA50599	50599	Terrabacteria group	Tenericutes	1.01723	23.7	chromosome:NC_017521.1/FR668087.1	-	1	915	829	7/4/11	4/7/17	Chromosome	Swiss Institute of Bioinformatics (Vital-IT)	SAMEA2272153	GCA_000253095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/095/GCA_000253095.1_ASM25309v1	-	99/014/6
Citrobacter amalonaticus Y19	1261127	PRJNA181160	181160	Proteobacteria	Gammaproteobacteria	5.87535	53.1177	chromosome:NZ_CP011132.1/CP011132.1; plasmid unnamed:NZ_CP011133.1/CP011133.1	-	2	5779	5455	4/29/15	4/3/17	Complete Genome	Pusan National University	SAMN03447475	GCA_000981805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/805/GCA_000981805.1_ASM98180v1	23377788	Y19
Xanthomonas albilineans	29447	PRJNA270013	270013	Proteobacteria	Gammaproteobacteria	3.63602	63	-	JZIC01	1	3088	2833	3/25/15	4/3/17	Contig	CIRAD	SAMN03262511	GCA_000962915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/915/GCA_000962915.1_Xal-HVO_082-G1	-	HVO082
Brenneria goodwinii	1109412	PRJNA308225	308225	Proteobacteria	Gammaproteobacteria	5.36073	53.1	chromosome:NZ_CP014137.1/CP014137.1	-	1	4786	4599	9/12/17	9/18/17	Complete Genome	Bangor University	SAMN04388496	GCA_002291445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/445/GCA_002291445.1_ASM229144v1	-	FRB141
Yersinia bercovieri	634	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.46067	49.1	-	CQBU01	32	4175	4009	3/22/15	4/10/17	Scaffold	SC	SAMEA859906	GCA_001131685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/685/GCA_001131685.1_5139_5_11	-	127/84
Pseudoalteromonas haloplanktis ANT/505	722419	PRJNA46103	46103	Proteobacteria	Gammaproteobacteria	4.49471	39.3	-	ADOP01	142	4101	3869	5/3/11	4/3/17	Contig	Institute of Marine Biotechnology	SAMN02469823	GCA_000212655.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/212/655/GCA_000212655.3_ASM21265v3	-	ANT/505
Acidovorax avenae subsp. avenae RS-1	995087	PRJNA63523	63523	Proteobacteria	Betaproteobacteria	5.52228	68.7	-	AFPT01	156	5108	4554	6/16/11	5/18/17	Contig	"Institute of Biotechnology, Zhejiang University"	SAMN02472164	GCA_000218805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/805/GCA_000218805.2_ASM21880v2	21742879	RS-1
Dokdonia donghaensis DSW-1	1300343	PRJNA264465	264465	FCB group	Bacteroidetes/Chlorobi group	3.21959	38.1	-	JSAQ01	9	2885	2819	10/27/14	4/9/17	Contig	University of La Laguna	SAMN03135132	GCA_000769435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/435/GCA_000769435.1_ASM76943v1	26574687	DSW-1
Fulvimarina pelagi	217511	PRJDB3816	300645	Proteobacteria	Alphaproteobacteria	3.77008	61.3	-	BBWO01	61	3523	3419	11/7/15	4/11/17	Contig	"Graduate School of Life Sciences, Tohoku University"	SAMD00028750	GCA_001463845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/845/GCA_001463845.1_ASM146384v1	26534993	DSM 15513
Loktanella vestfoldensis SKA53	314232	PRJNA13444	13444	Proteobacteria	Alphaproteobacteria	3.06685	59.9	-	AAMS01	3	3008	2923	1/6/06	4/7/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436109	GCA_000152785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/785/GCA_000152785.1_ASM15278v1	-	SKA53
Listeria grayi FSL F6-1183	1265827	PRJNA182530	182530	Terrabacteria group	Firmicutes	2.71911	41.4	-	AODG01	35	2791	2398	1/31/14	2/26/17	Contig	Cornell University	SAMN02671260	GCA_000525895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/895/GCA_000525895.1_Lgrayisubspmurrayi	-	FSL F6-1183
Geoglobus ahangari	113653	PRJNA258102	258102	Euryarchaeota	Archaeoglobi	1.77009	53.1	chromosome:NZ_CP011267.1/CP011267.1	-	1	2058	1985	5/11/15	4/17/17	Complete Genome	Michigan State University	SAMN02988852	GCA_001006045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/045/GCA_001006045.1_ASM100604v1	-	234
Desulfurococcus mucosus DSM 2162	765177	PRJNA48641	48641	TACK group	Crenarchaeota	1.31464	53.1	chromosome:NC_014961.1/CP002363.1	-	1	1404	1345	1/20/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00103627	GCA_000186365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/365/GCA_000186365.1_ASM18636v1	21677854	DSM 2162
Arcanobacterium haemolyticum DSM 20595	644284	PRJNA37925	37925	Terrabacteria group	Actinobacteria	1.98615	53.1	chromosome:NC_014218.1/CP002045.1	-	1	1858	1750	5/27/10	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598519	GCA_000092365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/365/GCA_000092365.1_ASM9236v1	21304742	DSM 20595
Geobacillus kaustophilus GBlys	1337888	PRJDB1127	205902	Terrabacteria group	Firmicutes	3.54148	52.1	-	BASG01	216	3648	3422	6/19/13	4/8/17	Contig	"Institute of Genetic Resources, Faculty of Agriculture, Kyushu University"	SAMD00036748	GCA_000415905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/905/GCA_000415905.1_Gbl_1.0	23950135	GBlys
Paracoccus denitrificans	266	PRJEB15959	348229	Proteobacteria	Alphaproteobacteria	5.19021	66.8	-	FNEA01	95	5152	4925	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04244581	GCA_900100045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/045/GCA_900100045.1_IMG-taxon_2597490357_annotated_assembly	-	DSM 413
Pelodictyon luteolum	1100	PRJNA315879	315879	FCB group	Bacteroidetes/Chlorobi group	2.15423	56.7	-	LVWG01	40	2019	1922	4/18/16	4/18/16	Scaffold	J. Craig Venter Institute	SAMN04571766	GCA_001622165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/165/GCA_001622165.1_ASM162216v1	-	-
Alcanivorax borkumensis	59754	PRJNA296541	296541	Proteobacteria	Gammaproteobacteria	3.06997	54.8	-	LKAP01	77	2797	2659	11/28/16	11/28/16	Contig	Sanya Institute of Deep Sea Science and Engineering	SAMN04100213	GCA_001887115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/115/GCA_001887115.1_ASM188711v1	-	-
Symbiobacterium thermophilum	2734	PRJNA317502	317502	Terrabacteria group	Firmicutes	3.45861	69.2	-	LWLV01	3221	3267	2295	5/11/17	5/11/17	Contig	Instituto de Quimica	SAMN04867920	GCA_002128215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/215/GCA_002128215.1_ASM212821v1	-	-
Citrobacter farmeri	67824	PRJNA397262	397262	Proteobacteria	Gammaproteobacteria	5.71563	53.0908	chromosome:NZ_CP022695.1/CP022695.1; plasmid pAUSMDU8141-1:NZ_CP022696.1/CP022696.1; plasmid pAUSMDU8141-2:NZ_CP022697.1/CP022697.1; plasmid pAUSMDU8141-3:NZ_CP022698.1/CP022698.1	-	4	5746	5425	8/14/17	8/16/17	Complete Genome	Doherty Applied Microbial Genomics	SAMN07452765	GCA_002249995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/995/GCA_002249995.1_ASM224999v1	-	AUSMDU00008141
Acetobacter pasteurianus IFO 3283-01	634452	PRJDA31129	31129	Proteobacteria	Alphaproteobacteria	3.34025	53.0701	chromosome:NC_013209.1/AP011121.1; plasmid pAPA01-011:NC_013210.1/AP011122.1; plasmid pAPA01-020:NC_013211.1/AP011123.1; plasmid pAPA01-030:NC_013212.1/AP011124.1; plasmid pAPA01-040:NC_013213.1/AP011125.1; plasmid pAPA01-050:NC_013214.1/AP011126.1; plasmid pAPA01-060:NC_013215.1/AP011127.1	-	7	3154	2917	8/27/09	4/10/17	Complete Genome	Acetobacter pasteurianus genome sequencing consortium	SAMD00060943	GCA_000010825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/825/GCA_000010825.1_ASM1082v1	19638423	IFO 3283 substr. IFO 3283-01
Verrucomicrobium spinosum DSM 4136 = JCM 18804	240016	PRJDB920	243784	PVC group	Verrucomicrobia	7.99181	60.2	-	BBFG01	482	8139	6503	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00016819	GCA_001313125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/125/GCA_001313125.1_ASM131312v1	-	JCM 18804
Acetobacter pasteurianus IFO 3283-07	634454	PRJDA31133	31133	Proteobacteria	Alphaproteobacteria	3.33843	53.0701	chromosome:NC_017121.1/AP011135.1; plasmid pAPA07-010:NC_017143.1/AP011136.1; plasmid pAPA07-020:NC_017122.1/AP011137.1; plasmid pAPA07-030:NC_017110.1/AP011138.1; plasmid pAPA07-040:NC_017123.1/AP011139.1; plasmid pAPA07-050:NC_017144.1/AP011140.1; plasmid pAPA07-060:NC_017124.1/AP011141.1	-	7	3150	2913	8/27/09	4/10/17	Complete Genome	Acetobacter pasteurianus genome sequencing consortium	SAMD00060945	GCA_000010865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/865/GCA_000010865.1_ASM1086v1	19638423	IFO 3283 substr. IFO 3283-07
Prevotella ruminicola Ga6B6	1410667	PRJNA223454	223454	FCB group	Bacteroidetes/Chlorobi group	3.47368	48.1	-	JHXD01	52	2869	2766	4/8/14	4/2/17	Contig	DOE Joint Genome Institute	SAMN02743888	GCA_000687715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/715/GCA_000687715.1_ASM68771v1	-	Ga6B6
Acetobacter pasteurianus IFO 3283-32	634457	PRJDA31139	31139	Proteobacteria	Alphaproteobacteria	3.33704	53.0701	chromosome:NC_017111.1/AP011156.1; plasmid pAPA32-012:NC_017134.1/AP011157.1; plasmid pAPA32-020:NC_017149.1/AP011158.1; plasmid pAPA32-030:NC_017135.1/AP011159.1; plasmid pAPA32-040:NC_017102.1/AP011160.1; plasmid pAPA32-050:NC_017103.1/AP011161.1; plasmid pAPA32-060:NC_017112.1/AP011162.1	-	7	3149	2911	8/27/09	4/10/17	Complete Genome	Acetobacter pasteurianus genome sequencing consortium	SAMD00060948	GCA_000010925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/925/GCA_000010925.1_ASM1092v1	19638423	IFO 3283 substr. IFO 3283-32
Acetobacter pasteurianus IFO 3283-12	634459	PRJNA32203	32203	Proteobacteria	Alphaproteobacteria	3.33699	53.0701	chromosome:NC_017108.1/AP011170.1; plasmid pAPA12-014:NC_017136.1/AP011171.1; plasmid pAPA12-020:NC_017113.1/AP011172.1; plasmid pAPA12-030:NC_017114.1/AP011173.1; plasmid pAPA12-040:NC_017115.1/AP011174.1; plasmid pAPA12-050:NC_017116.1/AP011175.1; plasmid pAPA12-060:NC_017137.1/AP011176.1	-	7	3150	2912	8/27/09	4/10/17	Complete Genome	Acetobacter pasteurianus genome sequencing consortium	SAMD00061107	GCA_000010965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/965/GCA_000010965.1_ASM1096v1	19638423	IFO 3283 substr. IFO 3283-12
Acetobacter pasteurianus IFO 3283-03	634453	PRJDA31131	31131	Proteobacteria	Alphaproteobacteria	3.33967	53.07	chromosome:NC_017100.1/AP011128.1; plasmid pAPA03-010:NC_017101.1/AP011129.1; plasmid pAPA03-020:NC_017118.1/AP011130.1; plasmid pAPA03-030:NC_017119.1/AP011131.1; plasmid pAPA03-040:NC_017142.1/AP011132.1; plasmid pAPA03-050:NC_017120.1/AP011133.1; plasmid pAPA03-060:NC_017109.1/AP011134.1	-	7	3150	2912	8/27/09	4/10/17	Complete Genome	Acetobacter pasteurianus genome sequencing consortium	SAMD00060944	GCA_000010845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/845/GCA_000010845.1_ASM1084v1	19638423	IFO 3283 substr. IFO 3283-03
Pseudarthrobacter phenanthrenivorans	361575	PRJNA269640	269640	Terrabacteria group	Actinobacteria	4.32805	66.6	-	JWTB01	83	4032	3912	1/2/15	4/10/17	Contig	University of Malaya	SAMN03256210	GCA_000813845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/845/GCA_000813845.1_ASM81384v1	-	SWC37
Pseudarthrobacter chlorophenolicus	85085	PRJNA275364	275364	Terrabacteria group	Actinobacteria	4.39368	66	-	JZTW01	41	4018	3892	3/25/15	4/10/17	Contig	"Center for Genomic Sciences, UNAM"	SAMN03342416	GCA_000962805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/805/GCA_000962805.1_ASM96280v1	25953176	Mor30.16
Acetobacter pasteurianus IFO 3283-22	634455	PRJDA31135	31135	Proteobacteria	Alphaproteobacteria	3.33965	53.07	chromosome:NC_017125.1/AP011142.1; plasmid pAPA22-010:NC_017117.1/AP011143.1; plasmid pAPA22-020:NC_017126.1/AP011144.1; plasmid pAPA22-030:NC_017127.1/AP011145.1; plasmid pAPA22-040:NC_017145.1/AP011146.1; plasmid pAPA22-050:NC_017128.1/AP011147.1; plasmid pAPA22-060:NC_017129.1/AP011148.1	-	7	3151	2914	8/27/09	4/10/17	Complete Genome	Acetobacter pasteurianus genome sequencing consortium	SAMD00060946	GCA_000010885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/885/GCA_000010885.1_ASM1088v1	19638423	IFO 3283 substr. IFO 3283-22
Acetobacter pasteurianus IFO 3283-26	634456	PRJDA31137	31137	Proteobacteria	Alphaproteobacteria	3.33968	53.07	chromosome:NC_017146.1/AP011149.1; plasmid pAPA26-013:NC_017130.1/AP011150.1; plasmid pAPA26-020:NC_017131.1/AP011151.1; plasmid pAPA26-030:NC_017147.1/AP011152.1; plasmid pAPA26-040:NC_017132.1/AP011153.1; plasmid pAPA26-050:NC_017148.1/AP011154.1; plasmid pAPA26-060:NC_017133.1/AP011155.1	-	7	3151	2914	8/27/09	4/10/17	Complete Genome	Acetobacter pasteurianus genome sequencing consortium	SAMD00060947	GCA_000010905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/905/GCA_000010905.1_ASM1090v1	19638423	IFO 3283 substr. IFO 3283-26
Tumebacillus algifaecis	1214604	PRJNA396806	396806	Terrabacteria group	Firmicutes	4.51696	53	chromosome:NZ_CP022657.1/CP022657.1	-	1	4096	3774	8/8/17	8/10/17	Complete Genome	Kyung Hee University	SAMN07420938	GCA_002243515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/515/GCA_002243515.1_ASM224351v1	25858243	THMBR28
Pelotomaculum thermopropionicum SI	370438	PRJDA19023	19023	Terrabacteria group	Firmicutes	3.02537	53	chromosome:AP009389.1	-	1	2977	2920	5/8/07	10/7/16	Complete Genome	"Marine Biotechnology Institute Co., Ltd"	SAMD00060921	GCA_000010565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/565/GCA_000010565.1_ASM1056v1	-	SI
Phenylobacterium zucineum	284016	PRJNA394136	394136	Proteobacteria	Alphaproteobacteria	3.29359	59.5	-	NMUI01	453	3424	2817	7/19/17	7/19/17	Contig	"Sao Paulo State University (UNESP), School of Agricultural and Veterinarian Sciences"	SAMN07352315	GCA_002221445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/445/GCA_002221445.1_ASM222144v1	-	-
Chlorobium phaeovibrioides DSM 265	290318	PRJNA12607	12607	FCB group	Bacteroidetes/Chlorobi group	1.96686	53	chromosome:NC_009337.1/CP000607.1	-	1	1858	1774	4/12/07	4/6/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598271	GCA_000016085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/085/GCA_000016085.1_ASM1608v1	-	DSM 265
Borreliella valaisiana VS116	445987	PRJNA19843	19843	Spirochaetes	Spirochaetia	1.25886	27.4768	chromosome:NZ_ABCY02000001.1/ABCY02000001.1; plasmid VS116_cp26:NC_012129.1/CP001432.1; plasmid VS116_cp32-10:NC_012133.1/CP001435.1; plasmid VS116_cp32-2-7:NC_012131.1/CP001434.1; plasmid VS116_cp32-5:NC_012128.1/CP001441.1; plasmid VS116_cp9:NC_012130.1/CP001438.1; plasmid VS116_lp17:NC_012180.1/CP001439.1; plasmid VS116_lp25:NC_012166.1/CP001437.1; plasmid VS116_lp28-3:NC_012185.1/CP001440.1; plasmid VS116_lp28-8:NC_012169.1/CP001442.1; plasmid VS116_lp36:NC_012204.1/CP001436.1; plasmid VS116_lp54:NC_012177.1/CP001433.1	ABCY02	12	1254	1105	6/26/07	9/1/17	Chromosome	J. Craig Venter Institute	SAMN02436326	GCA_000170955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/955/GCA_000170955.2_ASM17095v2	-	VS116
Bacillus coahuilensis m2-6	1150624	PRJNA84423	84423	Terrabacteria group	Firmicutes	3.2152	38	-	LDYF01	71	3418	3093	1/15/16	4/11/17	Contig	CINVESTAV-Irapuato	SAMN03614210	GCA_001516885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/885/GCA_001516885.1_ASM151688v1	26903955	m2-6
Enterobacter sp. 638	399742	PRJNA17461	17461	Proteobacteria	Gammaproteobacteria	4.67646	52.919	chromosome:NC_009436.1/CP000653.1; plasmid pENTE01:NC_009425.1/CP000654.1	-	2	4581	4361	4/18/07	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598394	GCA_000016325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/325/GCA_000016325.1_ASM1632v1	-	638
Desulfatibacillum alkenivorans DSM 16219	1121393	PRJEB18323	355759	Proteobacteria	delta/epsilon subdivisions	6.4677	54.9	-	FQZU01	102	5396	5215	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745216	GCA_900142135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/135/GCA_900142135.1_IMG-taxon_2585428156_annotated_assembly	-	DSM 16219
Lelliottia amnigena	61646	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.46961	52.9	chromosome:CP023529.1	-	1	4339	4106	9/28/17	9/28/17	Complete Genome	US Food and Drug Administration 	SAMN07312439	GCA_002393405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/405/GCA_002393405.1_ASM239340v1	-	FDAARGOS_395
Vibrio shilonii AK1	391591	PRJNA19397	19397	Proteobacteria	Gammaproteobacteria	5.70183	44	-	ABCH01	158	5341	5039	6/14/07	5/19/17	Contig	The Gordon and Betty Moore Foundation Microbial Genome Sequencing project	SAMN02436099	GCA_000181535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/181/535/GCA_000181535.1_ASM18153v1	-	AK1
Labrenzia alexandrii	388408	PRJEB10063	297539	Proteobacteria	Alphaproteobacteria	5.35186	56.3	-	CXWD01	47	5007	4893	10/1/15	4/11/17	Contig	UVEG	SAMEA3495742	GCA_001405815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/815/GCA_001405815.1_L.alexandriiCECT5112_Spades_Prokka	-	CECT 5112
Methylophaga thiooxydans	392484	PRJNA261236	261236	Proteobacteria	Gammaproteobacteria	2.58965	45.7	-	JRQD01	8	2563	2521	10/16/14	10/16/14	Contig	University of East Anglia	SAMN03093204	GCA_000767155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/155/GCA_000767155.1_ASM76715v1	-	-
Caldanaerobacter subterraneus subsp. pacificus DSM 12653	391606	PRJNA19289	19289	Terrabacteria group	Firmicutes	2.39142	37.5	-	ABXP02	135	2428	2089	10/1/08	4/10/17	Contig	The Gordon and Betty Moore Foundation Microbial Genome Sequencing project	SAMN02436270	GCA_000156275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/275/GCA_000156275.2_ASM15627v2	26446804	DSM 12653
Aciduliprofundum boonei T469	439481	PRJNA19277	19277	Euryarchaeota	unclassified Euryarchaeota	2.98181	39.2	-	ABSD01	41	3177	2993	7/15/08	4/7/17	Scaffold	The Gordon and Betty Moore Foundation Microbial Genome Sequencing Project	SAMN02436315	GCA_000151085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/151/085/GCA_000151085.1_ASM15108v1	18445019	T469
Acholeplasma laidlawii	2148	PRJNA315625	315625	Terrabacteria group	Tenericutes	1.48912	31.8	-	LVCP01	21	1461	1368	5/24/16	4/12/17	Contig	Kazan Institute of Biochemistry and Biophysics of the Kazan Scientific Center of the Russian Academy of Sciences	SAMN04566713	GCA_001650335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/335/GCA_001650335.1_ASM165033v1	-	PG8B
Pelotomaculum thermopropionicum	110500	PRJNA278302	278302	Terrabacteria group	Firmicutes	0.600788	48.4	-	LGGS01	191	773	773	1/8/16	1/8/16	Scaffold	Lawrence Berkeley National Lab	SAMN03445172	GCA_001508555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/555/GCA_001508555.1_ASM150855v1	26787827	-
Serratia proteamaculans	28151	PRJEB20089	382901	Proteobacteria	Gammaproteobacteria	5.36889	54.8	-	FWWG01	80	5140	4860	4/14/17	4/22/17	Contig	INRA	SAMEA103936875	GCA_900175135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/175/135/GCA_900175135.1_MFPA44A14-05.10	-	-
Labrenzia aggregata	187304	PRJEB10003	297169	Proteobacteria	Alphaproteobacteria	6.69613	58.9	-	CXST01	39	6181	6090	9/27/15	4/11/17	Scaffold	UVEG	SAMEA3492688	GCA_001403915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/403/915/GCA_001403915.1_L.aggregataCECT4801_Spades_Prokka	-	CECT 4801
Granulosicoccus antarcticus IMCC3135	1192854	PRJNA167143	167143	Proteobacteria	Gammaproteobacteria	7.78386	52.9	chromosome:NZ_CP018632.1/CP018632.1	-	1	6765	6595	7/6/17	7/8/17	Complete Genome	Inha University	SAMN06112367	GCA_002215215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/215/GCA_002215215.1_ASM221521v1	-	IMCC3135
Finegoldia magna ATCC 53516	525282	PRJNA31469	31469	Terrabacteria group	Firmicutes	1.9163	32.3	chromosome:NZ_CM000955.1/CM000955.1	ACHM02	1	3737	3596	3/10/09	3/30/17	Chromosome	Baylor College of Medicine	SAMN00001509	GCA_000159695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/695/GCA_000159695.1_ASM15969v1	-	ATCC 53516
Rickettsia massiliae str. AZT80	1105112	PRJNA75039	75039	Proteobacteria	Alphaproteobacteria	1.27872	32.5941	chromosome:NC_016931.1/CP003319.1; plasmid pRMB:NC_016939.1/CP003320.1	-	2	1520	1125	2/17/12	4/7/17	Chromosome	Los Alamos National Laboratory	SAMN02603559	GCA_000283855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/855/GCA_000283855.1_ASM28385v1	-	AZT80
Borrelia duttonii CR2A	1432657	PRJNA230496	230496	Spirochaetes	Spirochaetia	1.64095	27.9	-	AZIT01	136	1595	1046	1/27/14	4/9/17	Contig	Igenbio Inc	SAMN02641560	GCA_000523535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/535/GCA_000523535.1_BOR_261	-	CR2A
Lactobacillus zymae	267363	PRJEB20750	387144	Terrabacteria group	Firmicutes	2.73413	52.9	chromosome I:NZ_LT854705.1/LT854705.1	-	1	2617	2469	5/25/17	6/10/17	Complete Genome	Agricultural University of Athens	SAMEA104054545	GCA_900183405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/405/GCA_900183405.1_ASM90018340v1	-	ACA-DC 3411
Petrotoga mobilis	69499	PRJNA278302	278302	Thermotogae	Thermotogae	1.80417	33.8	-	LGFC01	267	1856	1856	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445128	GCA_001508055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/055/GCA_001508055.1_ASM150805v1	26787827	-
Thermococcus guaymasensis DSM 11113	1432656	PRJNA230529	230529	Euryarchaeota	Thermococci	1.92091	52.9	chromosome:NZ_CP007140.1/CP007140.1	-	1	2128	2029	1/7/15	4/17/17	Complete Genome	University of Waterloo	SAMN02429659	GCA_000816105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/105/GCA_000816105.1_ASM81610v1	-	DSM 11113
Desulfobacca acetoxidans DSM 11109	880072	PRJNA51777	51777	Proteobacteria	delta/epsilon subdivisions	3.28254	52.9	chromosome:NC_015388.1/CP002629.1	-	1	2988	2888	4/7/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713603	GCA_000195295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/295/GCA_000195295.1_ASM19529v1	21886866	DSM 11109
Sphingomonas wittichii	160791	PRJNA247568	247568	Proteobacteria	Alphaproteobacteria	4.89557	62.9	-	JQMC01	78	4659	4437	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02787159	GCA_000744515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/515/GCA_000744515.1_ASM74451v1	-	YR128
Acetobacter pasteurianus subsp. pasteurianus	481145	PRJNA386747	386747	Proteobacteria	Alphaproteobacteria	3.28798	52.8727	chromosome:NZ_CP021509.1/CP021509.1; plasmid pAP1342-1:NZ_CP021510.1/CP021510.1; plasmid pAP1342-2:NZ_CP021511.1/CP021511.1; plasmid pAP1342-3:NZ_CP021512.1/CP021512.1; plasmid pAP1342-4:NZ_CP021513.1/CP021513.1; plasmid pAP1342-5:NZ_CP021514.1/CP021514.1	-	6	3202	2959	6/6/17	6/8/17	Complete Genome	Microbial Institiue for Fermentation Industry	SAMN07125916	GCA_002173735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/735/GCA_002173735.1_ASM217373v1	-	SRCM101342
Acetobacter pasteurianus 386B	1266844	PRJEB1172	214045	Proteobacteria	Alphaproteobacteria	3.07865	52.8532	chromosome:NC_021991.1/HF677570.1; plasmid Apa386Bp1:NC_021976.1/HF677571.1; plasmid Apa386Bp2:NZ_HF677572.1/HF677572.1; plasmid Apa386Bp3:NC_021992.1/HF677573.1; plasmid Apa386Bp4:NC_021977.1/HF677574.1; plasmid Apa386Bp5:NC_021993.1/HF677575.1; plasmid Apa386Bp6:NC_021978.1/HF677576.1; plasmid Apa386Bp7:NC_021979.1/HF677577.1	-	8	2892	2725	8/1/13	4/2/17	Complete Genome	Vrije Universiteit Brussel	SAMEA3139047	GCA_000723785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/785/GCA_000723785.1_AP1	23902333	386B
Campylobacter curvus DSM 6644	1121268	PRJNA174983	174983	Proteobacteria	delta/epsilon subdivisions	1.9549	44.3	-	AQXN01	8	1980	1865	4/20/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441382	GCA_000376325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/325/GCA_000376325.1_ASM37632v1	-	DSM 6644
Candidatus Ruthia magnifica UCD-CM	1453289	PRJNA236124	236124	Proteobacteria	Gammaproteobacteria	1.16025	34	-	JARW01	18	1110	1034	1/27/14	4/9/17	Contig	UC Davis	SAMN02641591	GCA_000523495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/495/GCA_000523495.1_Ruthia_magnifica_Draft_Genome	25035337	UCD-CM
Rickettsiella grylli	59196	PRJNA336565	336565	Proteobacteria	Gammaproteobacteria	1.32561	38.2	-	MCRF01	470	1305	1080	11/17/16	4/14/17	Contig	SUNY Oswego	SAMN05513358	GCA_001881485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/485/GCA_001881485.1_ASM188148v1	-	TrM1
Geobacillus genomosp. 3	1921421	PRJNA208285	208285	Terrabacteria group	Firmicutes	3.48631	52.8226	chromosome:NC_022080.4/CP006254.2; plasmid pBt40:NC_022092.1/CP006255.1	-	2	3537	3306	8/13/13	4/9/17	Complete Genome	Shizuoka University	SAMN02603868	GCA_000445995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/995/GCA_000445995.2_ASM44599v2	24459274	JF8
Xylella fastidiosa	2371	PRJNA236207	236207	Proteobacteria	Gammaproteobacteria	2.86724	52.8078	chromosome:NZ_CP009823.1/CP009823.1; plasmid pXF27-J1:NZ_CP009824.1/CP009824.1; plasmid pXF51-J1:NZ_CP009825.1/CP009825.1	-	3	2841	2465	12/3/15	6/28/17	Complete Genome	University of Sao Paulo	SAMN03166204	GCA_001456235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/235/GCA_001456235.1_ASM145623v1	-	J1a12
Acetobacter pasteurianus	438	PRJNA384998	384998	Proteobacteria	Alphaproteobacteria	3.12745	52.8	chromosome:NZ_CP022374.1/CP022374.1	-	1	2995	2795	7/17/17	7/19/17	Complete Genome	Boston University	SAMN06855882	GCA_002220195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/195/GCA_002220195.1_ASM222019v1	-	dm
Fibrella sp. ES10-3-2-2	1834519	PRJNA318434	318434	FCB group	Bacteroidetes/Chlorobi group	6.40803	52.8	chromosome:NZ_CP015317.1/CP015317.1	-	1	5179	5071	4/24/17	4/26/17	Complete Genome	Seoul Women's University	SAMN04851281	GCA_002108455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/455/GCA_002108455.1_ASM210845v1	-	ES10-3-2-2
Clostridium novyi B str. ATCC 27606	1443123	PRJNA233467	233467	Terrabacteria group	Firmicutes	2.61309	27.5694	plasmid p2Cn27606:NZ_CM003350.1/CM003350.1; plasmid p4Cn27606:NZ_CM003351.1/CM003351.1	JENW01	168	2597	2381	6/20/14	4/3/17	Contig	National Veterinary Institute (SVA)	SAMN02593756	GCA_000724245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/245/GCA_000724245.2_ATCC27606_1.0	25254374	ATCC 27606
Polynucleobacter necessarius	576610	PRJNA323729	323729	Proteobacteria	Betaproteobacteria	1.41421	45.6	-	MAIK01	729	-	-	7/1/16	7/1/16	Contig	University of KwaZulu-Natal	SAMN05210897	GCA_001678065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/065/GCA_001678065.1_PT2	-	-
Sinorhizobium medicae WSM1115	935558	PRJNA74391	74391	Proteobacteria	Alphaproteobacteria	6.86106	61.2	-	AQZC01	7	6914	6398	4/22/13	5/19/17	Scaffold	JGI	SAMN02261275	GCA_000378785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/785/GCA_000378785.1_ASM37878v1	-	WSM1115
Aurantimicrobium minutum	708131	PRJDB4581	321500	Terrabacteria group	Actinobacteria	1.62239	52.8	chromosome sequence1:AP017457.1	-	1	2044	1574	5/12/16	7/5/16	Complete Genome	National Institute of Genetics	SAMD00047652	GCA_002355535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/535/GCA_002355535.1_ASM235553v1	-	KNC
Megasphaera elsdenii 14-14	1458465	PRJNA237235	237235	Terrabacteria group	Firmicutes	2.50435	52.8	chromosome:NZ_CP009240.1/CP009240.1	-	1	2366	2207	10/1/15	4/4/17	Complete Genome	National Animal Disease Center	SAMN02953477	GCA_001304715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/715/GCA_001304715.1_ASM130471v1	-	14-14
Treponema pallidum subsp. pallidum str. Sea 81-4	1095955	PRJNA74337	74337	Spirochaetes	Spirochaetia	1.1392	52.8	chromosome:NZ_CP003679.1/CP003679.1	-	1	1067	963	3/28/14	4/2/17	Complete Genome	University of Washington	SAMN03081438	GCA_000604125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/125/GCA_000604125.1_ASM60412v1	24744342	Sea 81-4
Gallionella capsiferriformans ES-2	395494	PRJNA32827	32827	Proteobacteria	Betaproteobacteria	3.16247	52.8	chromosome:NC_014394.1/CP002159.1	-	1	2954	2864	8/11/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002572	GCA_000145255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/255/GCA_000145255.1_ASM14525v1	-	ES-2
Lachnoclostridium phytofermentans KNHs2132	1458468	PRJNA237254	237254	Terrabacteria group	Firmicutes	4.71171	35.6	-	JNLG01	1	4044	3886	6/11/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02841202	GCA_000702985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/985/GCA_000702985.1_ASM70298v1	-	KNHs2132
Burkholderia dolosa PC543	1385930	PRJNA214965	214965	Proteobacteria	Betaproteobacteria	6.29797	67.0751	chromosome 1:NZ_CM002277.1/CM002277.1; chromosome 2:NZ_CM002278.1/CM002278.1; chromosome 3:NZ_CM002279.1/CM002279.1	AWRY01	3	5817	5448	11/18/13	4/9/17	Chromosome	McMaster University	SAMN02470544	GCA_000497165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/165/GCA_000497165.1_Bdolosa1.0	24526633	PC543
Treponema pallidum subsp. pallidum str. Nichols	243276	PRJNA5	5	Spirochaetes	Spirochaetia	1.13801	52.8	chromosome:AE000520.1	-	1	1091	1031	3/6/98	1/31/14	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02604348	GCA_000008605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/605/GCA_000008605.1_ASM860v1	-	Nichols
Acetobacter pasteurianus NBRC 101655	1006554	PRJDA65545	65545	Proteobacteria	Alphaproteobacteria	3.10099	52.7589	chromosome Unknown:NZ_AP014881.1/AP014881.1; plasmid plasmid1:NZ_AP014882.1/AP014882.1; plasmid plasmid2:NZ_AP014883.1/AP014883.1; plasmid plasmid3:NZ_AP014884.1/AP014884.1; plasmid plasmid4:NZ_AP014885.1/AP014885.1	-	5	2891	2742	1/28/16	4/10/17	Complete Genome	Yamaguchi University	SAMD00010881	GCA_000241585.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/585/GCA_000241585.3_ASM24158v3	27667143	NBRC 101655
Yersinia intermedia ATCC 29909	349965	PRJNA16107	16107	Proteobacteria	Gammaproteobacteria	4.71132	47.4	-	AALF02	123	4288	4067	10/19/05	5/19/17	Contig	Naval Medical Research Center	SAMN00005354	GCA_000168035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/035/GCA_000168035.1_ASM16803v1	-	ATCC 29909
Yersinia mollaretii	33060	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.65196	48.9	-	CPYJ01	30	4260	4045	3/23/15	4/3/17	Scaffold	SC	SAMEA859854	GCA_001108385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/385/GCA_001108385.1_4840_7_3	-	IP22404
Halomonas sp. 'Soap Lake #7'	1962264	PRJNA360432	360432	Proteobacteria	Gammaproteobacteria	4.80369	52.7	chromosome:NZ_CP019915.1/CP019915.1	-	1	4350	4187	3/2/17	3/8/17	Complete Genome	NSF International	SAMN06210484	GCA_002009255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/255/GCA_002009255.1_ASM200925v1	-	Soap Lake #7
Spirosoma montaniterrae	1178516	PRJNA308406	308406	FCB group	Bacteroidetes/Chlorobi group	5.79768	52.7	chromosome:NZ_CP014263.1/CP014263.1	-	1	4988	4845	2/6/17	4/17/17	Complete Genome	Seoul Women's University	SAMN04395154	GCA_001988955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/955/GCA_001988955.1_ASM198895v1	-	DY10
Nitrososphaera viennensis EN76	926571	PRJEA60103	60103	TACK group	Thaumarchaeota	2.52794	52.7	chromosome:NZ_CP007536.1/CP007536.1	-	1	2882	2801	6/6/14	4/17/17	Complete Genome	University of Vienna	SAMN02721150	GCA_000698785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/785/GCA_000698785.1_ASM69878v1	24907263	EN76
Leuconostoc citreum LBAE C10	1108974	PRJEA78993	78993	Terrabacteria group	Firmicutes	1.93443	38.8	-	CAGE01	76	1939	1826	12/21/11	3/30/17	Contig	LISBP	SAMEA2272656	GCA_000239895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/895/GCA_000239895.2_ASM23989v2	-	LBAE C10
Cupriavidus taiwanensis STM 6070	1040979	PRJNA165313	165313	Proteobacteria	Betaproteobacteria	6.77177	67.2	-	AQUR01	107	6244	5962	4/19/13	5/18/17	Contig	DOE Joint Genome Institute	SAMN02256497	GCA_000372525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/525/GCA_000372525.1_ASM37252v1	-	STM6070
Leuconostoc gelidum subsp. gasicomitatum	115778	PRJEB12227	324801	Terrabacteria group	Firmicutes	2.00836	36.6	-	FBSY01	22	2020	1901	6/8/16	7/29/17	Scaffold	UNIVERSITY OF HELSINKI	SAMEA3718675	GCA_900016145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/145/GCA_900016145.1_ASM90001614v1	-	C122c
Methanocella conradii HZ254	1041930	PRJNA73221	73221	Euryarchaeota	Methanomicrobia	2.37844	52.7	chromosome:NC_017034.1/CP003243.1	-	1	2518	2436	3/7/12	4/7/17	Complete Genome	China Agricultural University	SAMN02603117	GCA_000251105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/105/GCA_000251105.1_ASM25110v1	"225,300,022,249,320,000,000,000"	HZ254
Desulfovibrio cf. magneticus IFRC170	1304872	PRJNA195833	195833	Proteobacteria	delta/epsilon subdivisions	4.84465	64.7	-	JAGC01	10	4266	4097	1/14/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02584937	GCA_000526455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/455/GCA_000526455.1_ASM52645v1	-	IFRC170
Pseudothermotoga lettingae	177758	PRJNA278302	278302	Thermotogae	Thermotogae	2.02563	38.7	-	LGFF01	203	2145	2145	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445131	GCA_001508115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/115/GCA_001508115.1_ASM150811v1	26787827	-
Stigmatella aurantiaca DW4/3-1	378806	PRJNA15671	15671	Proteobacteria	delta/epsilon subdivisions	10.2654	67.4	-	AAMD01	579	8643	7850	9/28/06	5/19/17	Contig	TIGR	SAMN02435837	GCA_000168055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/055/GCA_000168055.1_ASM16805v1	-	DW4/3-1
Treponema paraluiscuniculi Cuniculi A	545776	PRJNA30657	30657	Spirochaetes	Spirochaetia	1.13339	52.7	chromosome:NC_015714.1/CP002103.1	-	1	1062	976	6/9/11	4/17/17	Complete Genome	Baylor College of Medicine	SAMN02603006	GCA_000217655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/655/GCA_000217655.1_ASM21765v1	21655244	Cuniculi A
Croceibacter atlanticus	313588	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.86328	33.5	-	DELP01	13	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451360	GCA_002354475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/475/GCA_002354475.1_ASM235447v1	28894102	-
Nitrosomonas eutropha	916	PRJEB15888	347956	Proteobacteria	Betaproteobacteria	2.53454	48	-	FMTW01	74	2391	2197	10/17/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216379	GCA_900100815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/815/GCA_900100815.1_IMG-taxon_2671180129_annotated_assembly	-	Nm14
Neisseria gonorrhoeae FA 1090	242231	PRJNA23	23	Proteobacteria	Betaproteobacteria	2.15392	52.7	chromosome:NC_002946.2/AE004969.1	-	1	1989	1886	9/28/00	4/20/16	Complete Genome	Univ. Oklahoma	SAMN02604088	GCA_000006845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/006/845/GCA_000006845.1_ASM684v1	-	FA 1090
Xylella fastidiosa	2371	PRJNA266708	266708	Proteobacteria	Gammaproteobacteria	2.87755	52.6911	chromosome:NZ_CP009885.1/CP009885.1; plasmid pXF64-HB:NZ_CP009886.1/CP009886.1	-	2	2816	2507	12/3/15	6/28/17	Complete Genome	Universidade de Sao Paulo	SAMN03173341	GCA_001456315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/315/GCA_001456315.1_ASM145631v1	-	Hib4
Staphylococcus saprophyticus	29385	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.41958	33.1	-	JUTO01	76	2366	2298	7/10/15	4/3/17	Contig	University of Washington	SAMN03197982	GCA_001074355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/355/GCA_001074355.1_ASM107435v1	26230489	772_SSAP
Streptococcus sanguinis VMC66	888825	PRJNA53191	53191	Terrabacteria group	Firmicutes	2.31945	43.3	-	AEVH01	5	2301	2194	2/4/11	3/30/17	Scaffold	Baylor College of Medicine	SAMN00253296	GCA_000188275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/275/GCA_000188275.1_ASM18827v1	-	VMC66
Nitrosospira multiformis	1231	PRJEB16165	348913	Proteobacteria	Betaproteobacteria	3.51592	52.9	-	FNKY01	2	3174	3064	10/20/16	4/5/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216402	GCA_900103165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/165/GCA_900103165.1_IMG-taxon_2667527227_annotated_assembly	-	Nl1
Rhodoferax ferrireducens	192843	PRJNA340050	340050	Proteobacteria	Betaproteobacteria	4.4725	60	-	MTEI01	44	4192	4048	4/10/17	4/10/17	Scaffold	University of Michigan	SAMN06213942	GCA_002083775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/775/GCA_002083775.1_ASM208377v1	-	-
Rickettsia felis	42862	PRJNA258188	258188	Proteobacteria	Alphaproteobacteria	1.5791	32.4	-	JSEL01	43	1753	1263	12/18/14	4/9/17	Contig	Western Carolina University	SAMN02989771	GCA_000804505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/505/GCA_000804505.1_ASM80450v1	25477419	LSU-Lb
Rhodococcus jostii NBRC 16295	1219017	PRJDB296	172264	Terrabacteria group	Actinobacteria	9.72711	66.9	-	BCWY01	286	8983	8358	12/6/16	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00046778	GCA_001894825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/825/GCA_001894825.1_ASM189482v1	-	NBRC 16295
Xylella fastidiosa 9a5c	160492	PRJNA271	271	Proteobacteria	Gammaproteobacteria	2.73175	52.6433	chromosome:NC_002488.3/AE003849.1; plasmid pXF1.3:NC_002489.3/AE003850.3; plasmid pXF51:NC_002490.1/AE003851.1	-	3	2658	2379	6/2/00	3/29/17	Complete Genome	Sao Paulo state (Brazil) Consortium	SAMN02603773	GCA_000006725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/006/725/GCA_000006725.1_ASM672v1	10910347	9a5c
Xylella fastidiosa	2371	PRJNA266001	266001	Proteobacteria	Gammaproteobacteria	2.73249	52.642	chromosome:NZ_CP009790.1/CP009790.1; plasmid pXF51ud:NZ_CP009791.1/CP009791.1	-	2	2655	2345	12/3/15	6/28/17	Complete Genome	Universidade de Sao Paulo	SAMN03154423	GCA_001456275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/275/GCA_001456275.1_ASM145627v1	-	U24D
Mariprofundus ferrooxydans M34	1188231	PRJNA165245	165245	Proteobacteria	Zetaproteobacteria	2.73618	53.9	-	ARAU01	36	2691	2586	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02256458	GCA_000379405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/405/GCA_000379405.1_ASM37940v1	-	M34
Aurantimonas manganoxydans SI85-9A1	287752	PRJDB3816	300645	Proteobacteria	Alphaproteobacteria	4.24825	66.8	-	BBWP01	94	3944	3821	11/7/15	4/11/17	Contig	"Graduate School of Life Sciences, Tohoku University"	SAMD00028747	GCA_001463865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/865/GCA_001463865.1_ASM146386v1	26534993	DSM 21871
Leeuwenhoekiella blandensis	360293	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.3977	39.1	-	DBNC01	397	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457067	GCA_002297705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/705/GCA_002297705.1_ASM229770v1	28894102	-
Clostridium ljungdahlii	1538	PRJNA280340	280340	Terrabacteria group	Firmicutes	4.36392	31.1	-	LITT01	65	4094	3808	5/4/16	4/12/17	Contig	Cornell University	SAMN03459580	GCA_001636845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/845/GCA_001636845.1_ASM163684v1	26331212	ERI-2
Photobacterium angustum	661	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.93535	39.5	-	JZSO01	166	4391	3984	3/10/15	4/3/17	Contig	FDA/CFSAN	SAMN03295481	GCA_000950005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/005/GCA_000950005.1_CFSAN029433_01.0	-	ATCC 25915
Parabacteroides distasonis CL09T03C24	999417	PRJNA64885	64885	FCB group	Bacteroidetes/Chlorobi group	5.33854	45	-	AGZN01	10	4566	4349	10/19/12	6/12/17	Scaffold	Broad Institute	SAMN02463938	GCA_000307435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/435/GCA_000307435.1_Para_dist_CL09T03C24_V1	-	CL09T03C24
Geobacillus stearothermophilus 10	272567	PRJNA252389	252389	Terrabacteria group	Firmicutes	3.67649	52.6118	chromosome:NZ_CP008934.1/CP008934.1; plasmid unnamed:NZ_CP008935.1/CP008935.1	-	2	3737	3396	8/26/15	4/4/17	Complete Genome	The University of Oklahoma	SAMN04012428	GCA_001274575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/274/575/GCA_001274575.1_ASM127457v1	-	10
Neisseria gonorrhoeae	485	PRJEB6403	251923	Proteobacteria	Betaproteobacteria	2.17222	52.6	chromosome 1:NZ_LT906437.1/LT906437.1	-	1	2592	2195	8/15/17	8/28/17	Complete Genome	SC	SAMEA4076765	GCA_900186935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/935/GCA_900186935.1_49677_G01	-	NCTC13799
Xylella fastidiosa	2371	PRJNA266562	266562	Proteobacteria	Gammaproteobacteria	2.74859	52.6	chromosome:NZ_CP009829.1/CP009829.1	-	1	2660	2354	12/3/15	6/28/17	Complete Genome	Universidade de Sao Paulo	SAMN03166214	GCA_001456195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/195/GCA_001456195.1_ASM145619v1	-	3124
Neisseria gonorrhoeae	485	PRJNA278367	278367	Proteobacteria	Betaproteobacteria	2.1687	52.6	chromosome:NZ_CP012027.1/CP012027.1	-	1	2555	2217	7/7/15	4/11/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03459416	GCA_001047255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/255/GCA_001047255.1_ASM104725v1	26358608	FA6140
Neisseria gonorrhoeae	485	PRJNA278367	278367	Proteobacteria	Betaproteobacteria	2.17324	52.6	chromosome:NZ_CP012028.1/CP012028.1	-	1	2556	2222	7/7/15	4/11/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03459417	GCA_001047275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/275/GCA_001047275.1_ASM104727v1	26358608	35/02
Arthrospira platensis YZ	1738638	PRJNA299041	299041	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.52077	44.2	chromosome:NZ_CP013008.1/CP013008.1	-	1	6535	5551	4/6/16	4/12/17	Chromosome	Wenzhou Medical University	SAMN04192332	GCA_001611905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/905/GCA_001611905.1_ASM161190v1	-	YZ
Halomonas campaniensis	213554	PRJNA248383	248383	Proteobacteria	Gammaproteobacteria	4.07405	52.6	chromosome:NZ_CP007757.1/CP007757.1	-	1	3725	3572	5/30/14	4/17/17	Complete Genome	Tsinghua University	SAMN02798098	GCA_000696485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/485/GCA_000696485.1_ASM69648v1	-	LS21
Nodularia spumigena CCY9414	313624	PRJNA13447	13447	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.31626	41.3	-	AAVW01	204	4783	4420	12/15/06	5/19/17	Contig	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436091	GCA_000169135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/135/GCA_000169135.1_ASM16913v1	-	CCY9414
Paenibacillus sabinae T27	1268072	PRJNA183187	183187	Terrabacteria group	Firmicutes	5.27057	52.6	chromosome:NZ_CP004078.1/CP004078.1	-	1	4904	4689	4/4/14	4/17/17	Complete Genome	China Agricultural University	SAMN03081446	GCA_000612505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/505/GCA_000612505.1_ASM61250v1	24651173	T27
Xylella fastidiosa	2371	PRJNA266022	266022	Proteobacteria	Gammaproteobacteria	2.77337	52.5616	chromosome:NZ_CP010051.1/CP010051.1; plasmid unnamed:NZ_CP014330.1/CP014330.1	-	2	2694	2341	12/3/15	6/24/17	Complete Genome	Universidade de Sao Paulo	SAMN03154693	GCA_001456335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/335/GCA_001456335.2_ASM145633v2	-	Fb7
Deinococcus geothermalis	68909	PRJNA348753	348753	Terrabacteria group	Deinococcus-Thermus	3.01973	66.7	-	DGBJ01	95	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457827	GCA_002384255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/255/GCA_002384255.1_ASM238425v1	28894102	-
Listeria seeligeri FSL N1-067	702453	PRJNA42859	42859	Terrabacteria group	Firmicutes	3.14016	37.3	chromosome:NZ_CM001051.1/CM001051.1	ADXJ01	1	6687	5871	12/6/10	2/26/17	Chromosome	Life Technologies Corporation	SAMN01909078	GCA_000183945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/945/GCA_000183945.1_ASM18394v1	21126366	FSL N1-067
Citrobacter rodentium NBRC 105723	1218085	PRJDB258	172081	Proteobacteria	Gammaproteobacteria	5.18678	54.6	-	BBNA01	139	5095	4712	9/26/14	4/9/17	Contig	National Institute of Technology and Evaluation	SAMD00019864	GCA_000759815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/815/GCA_000759815.1_ASM75981v1	-	NBRC 105723
Xylella fastidiosa	2371	PRJNA266561	266561	Proteobacteria	Gammaproteobacteria	2.70582	52.5547	chromosome:NZ_CP009826.1/CP009826.1; plasmid pXF39:NZ_CP009827.1/CP009827.1	-	2	2625	2328	12/3/15	6/28/17	Complete Genome	Universidade de Sao Paulo	SAMN03166213	GCA_001456295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/295/GCA_001456295.1_ASM145629v1	-	Pr8x
Corynebacterium mustelae	571915	PRJNA282348	282348	Terrabacteria group	Actinobacteria	3.47423	52.5343	chromosome:NZ_CP011542.1/CP011542.1; plasmid pCmus45274:NZ_CP011543.1/CP011543.1; plasmid phiCmus45274:NZ_CP011544.1/CP011544.1	-	3	3148	3042	6/5/15	4/17/17	Complete Genome	Bielefeld University	SAMN03568800	GCA_001020985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/985/GCA_001020985.1_ASM102098v1	26358597	DSM 45274
Idiomarina baltica	190892	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.39872	46.8	-	DBGH01	137	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455557	GCA_002295405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/405/GCA_002295405.1_ASM229540v1	28894102	-
Halorubrum lacusprofundi	2247	PRJNA343348	343348	Euryarchaeota	Halobacteria	3.27855	65.4	-	MJCD01	277	3259	3077	7/6/17	7/8/17	Scaffold	University of NSW	SAMN05786778	GCA_002215285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/285/GCA_002215285.1_ASM221528v1	-	HLS1
Xenorhabdus nematophila ATCC 19061	406817	PRJNA13400	13400	Proteobacteria	Gammaproteobacteria	4.58792	44.2609	chromosome:NC_014228.1/FN667742.1; plasmid XNC1_p:NC_014170.1/FN667743.1	-	2	4223	3754	2/19/10	4/7/17	Chromosome	Danforth Science Center	SAMEA3138407	GCA_000252955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/955/GCA_000252955.1_ASM25295v1	22125637	ATCC 19061
Shewanella frigidimarina	56812	PRJNA308795	308795	Proteobacteria	Gammaproteobacteria	4.79663	41.2	-	LRDC01	100	4175	3999	1/22/16	4/11/17	Contig	Instituto de Investigaciones en Microbiologia y Parasitologia Medica (UBA/CONICET)-Facultad de Medicina-Universidad de Buenos Aires	SAMN04413751	GCA_001529365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/365/GCA_001529365.1_ASM152936v1	27151790	Ag06-30
Citrobacter werkmanii	67827	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.8851	52.5	chromosome:CP023504.1	-	1	4836	4530	9/28/17	9/28/17	Complete Genome	US Food and Drug Administration 	SAMN07312408	GCA_002386385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/385/GCA_002386385.1_ASM238638v1	-	FDAARGOS_364
Neisseria gonorrhoeae	485	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	2.21242	52.5	chromosome:NZ_CP020415.1/CP020415.1	-	1	2596	2245	3/29/17	4/10/17	Complete Genome	US Food and Drug Administration 	SAMN04875541	GCA_002073535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/535/GCA_002073535.1_ASM207353v1	-	FDAARGOS_204
Agrobacterium vitis	373	PRJNA300487	300487	Proteobacteria	Alphaproteobacteria	5.74143	57.6	-	LMVL01	42	5170	4955	1/26/16	4/4/17	Contig	Monash University Malaysia	SAMN04223557	GCA_001541345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/345/GCA_001541345.1_ASM154134v1	-	NCPPB 3554
Bacteroides vulgatus	821	PRJNA295507	295507	FCB group	Bacteroidetes/Chlorobi group	5.16589	42.2	chromosome:NZ_CP013020.1/CP013020.1	-	1	4407	3511	10/26/15	4/18/17	Chromosome	Universitaet Tuebingen	SAMN04074912	GCA_001412315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/315/GCA_001412315.1_ASM141231v1	27071651	mpk
Paenibacillus beijingensis	1126833	PRJNA277798	277798	Terrabacteria group	Firmicutes	5.74997	52.5	chromosome:NZ_CP011058.1/CP011058.1	-	1	5255	4988	3/24/15	4/10/17	Complete Genome	Kyungpook National University	SAMN03396708	GCA_000961095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/095/GCA_000961095.1_ASM96109v1	25937453	DSM 24997
Porphyromonas asaccharolytica DSM 20707	879243	PRJNA51745	51745	FCB group	Bacteroidetes/Chlorobi group	2.18637	52.5	chromosome:NC_015501.1/CP002689.1	-	1	1785	1688	5/5/11	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713611	GCA_000212375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/212/375/GCA_000212375.1_ASM21237v1	-	DSM 20707
Geobacillus sp. C56-T3	691437	PRJNA41701	41701	Terrabacteria group	Firmicutes	3.65081	52.5	chromosome:NC_014206.1/CP002050.1	-	1	3750	3439	6/1/10	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598534	GCA_000092445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/445/GCA_000092445.1_ASM9244v1	-	C56-T3
Corynebacterium callunae DSM 20147	1121353	PRJNA190670	190670	Terrabacteria group	Actinobacteria	2.92868	52.4609	chromosome:NC_020506.1/CP004354.1; plasmid pCC1:NC_020523.1/CP004355.1; plasmid pCC2:NC_020553.1/CP004356.1	-	3	2730	2568	3/6/13	4/8/17	Complete Genome	"CeBiTec, Bielefeld University"	SAMN02603058	GCA_000344785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/785/GCA_000344785.1_ASM34478v1	-	DSM 20147
[Eubacterium] eligens	39485	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.22216	37.7	-	CZBU01	21	3124	2980	10/1/15	4/11/17	Contig	SC	SAMEA3545341	GCA_001404435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/435/GCA_001404435.1_13470_2_94	-	2789STDY5834875
Photobacterium profundum 3TCK	314280	PRJNA13563	13563	Proteobacteria	Gammaproteobacteria	6.18633	41.4	-	AAPH01	11	5533	5251	3/23/06	5/19/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436087	GCA_000153425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/425/GCA_000153425.1_ASM15342v1	-	3TCK
Wolbachia endosymbiont of Culex quinquefasciatus JHB	569881	PRJNA32209	32209	Proteobacteria	Alphaproteobacteria	1.54366	34.2	-	ABZA01	16	1484	1286	11/14/08	4/7/17	Scaffold	University of Maryland Center for Bioinformatics and Computational Biology	SAMN02471874	GCA_000156735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/735/GCA_000156735.1_ASM15673v1	19114486	-
Kluyvera intermedia	61648	PRJNA246471	246471	Proteobacteria	Gammaproteobacteria	6.16645	52.4326	chromosome:NZ_CP011602.1/CP011602.1; plasmid pCAV1151-215:NZ_CP011600.1/CP011600.1; plasmid pCAV1151-296:NZ_CP011601.1/CP011601.1; plasmid pCAV1151-83:NZ_CP011599.1/CP011599.1; plasmid pKPC_CAV1151:NZ_CP011598.1/CP011598.1	-	5	6119	5789	6/9/15	4/10/17	Complete Genome	University of Oxford	SAMN03733692	GCA_001022135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/135/GCA_001022135.1_ASM102213v1	-	CAV1151
Thiobacillus denitrificans	36861	PRJNA284683	284683	Proteobacteria	Betaproteobacteria	3.29365	62.8	-	LDUG01	86	3313	3100	1/22/16	6/20/17	Scaffold	University of Cincinnati	SAMN03731048	GCA_001530125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/125/GCA_001530125.1_ASM153012v1	26712544	RG
Syntrophomonas wolfei subsp. methylbutyratica	378794	PRJDB3315	308294	Terrabacteria group	Firmicutes	3.19147	45.6	-	BBQT01	92	3027	2878	1/7/16	4/11/17	Contig	National Institute of Advanced Industrial Science and Technology (AIST)	SAMD00023186	GCA_001570625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/625/GCA_001570625.1_ASM157062v1	26941138	JCM14075
Neisseria gonorrhoeae	485	PRJEB6403	251923	Proteobacteria	Betaproteobacteria	2.22664	52.4	chromosome 1:NZ_LT906472.1/LT906472.1	-	1	2644	2249	8/15/17	8/28/17	Complete Genome	SC	SAMEA4076768	GCA_900186915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/915/GCA_900186915.1_49699_A01	-	NCTC13800
Neisseria gonorrhoeae	485	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	2.18934	52.4	chromosome:NZ_CP020419.1/CP020419.1	-	1	2572	2220	3/29/17	4/11/17	Complete Genome	US Food and Drug Administration 	SAMN04875544	GCA_002073655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/655/GCA_002073655.1_ASM207365v1	-	FDAARGOS_207
Neisseria gonorrhoeae	485	PRJNA301053	301053	Proteobacteria	Betaproteobacteria	2.21882	52.4	chromosome:NZ_CP016015.1/CP016015.1	-	1	2615	2262	6/10/16	4/10/17	Complete Genome	Public Health Agency of Canada	SAMN04233132	GCA_001661085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/661/085/GCA_001661085.1_ASM166108v1	-	32867
Streptomyces scabiei	1930	PRJNA255691	255691	Terrabacteria group	Actinobacteria	10.4767	70.6	-	JPPX01	89	9137	8477	8/8/14	3/12/17	Scaffold	University of Exeter	SAMN02927997	GCA_000738695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/695/GCA_000738695.1_ASM73869v1	-	NCPPB 4086
Neisseria gonorrhoeae	485	PRJNA301053	301053	Proteobacteria	Betaproteobacteria	2.22837	52.4	chromosome:NZ_CP016016.1/CP016016.1	-	1	2621	2275	6/10/16	4/10/17	Complete Genome	Public Health Agency of Canada	SAMN05210135	GCA_001661115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/661/115/GCA_001661115.1_ASM166111v1	-	34530
Halobacteriovorax marinus	97084	PRJNA320927	320927	Proteobacteria	Oligoflexia	4.54726	35.7	-	MAAO01	16	4370	4321	5/31/17	5/31/17	Scaffold	Lawrence Berkeley National Lab	SAMN05179562	GCA_002163155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/155/GCA_002163155.1_ASM216315v1	28652349	-
Haloferax volcanii DS2	309800	PRJNA174947	174947	Euryarchaeota	Halobacteria	3.86675	65.8	-	AOHU01	119	3899	3697	2/4/13	4/8/17	Contig	"University of California, Davis"	SAMN02471619	GCA_000337315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/315/GCA_000337315.1_ASM33731v1	25393412	DS2
Chlorobium limicola	1092	PRJNA300282	300282	FCB group	Bacteroidetes/Chlorobi group	2.08745	50.7	-	LMBR01	259	2068	1860	1/8/16	4/11/17	Contig	Pennsylvania State University	SAMN04217978	GCA_001509575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/575/GCA_001509575.1_ASM150957v1	27174272	Frasassi
Campylobacter upsaliensis RM3195	306264	PRJNA12518	12518	Proteobacteria	delta/epsilon subdivisions	1.77383	34.3	-	AAFJ01	20	1891	1763	1/4/05	4/7/17	Scaffold	TIGR	SAMN02435831	GCA_000167395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/395/GCA_000167395.1_ASM16739v1	15660156	RM3195
Neisseria gonorrhoeae	485	PRJNA301053	301053	Proteobacteria	Betaproteobacteria	2.22034	52.4	chromosome:NZ_CP016017.1/CP016017.1	-	1	2618	2276	6/10/16	4/10/17	Complete Genome	Public Health Agency of Canada	SAMN05210257	GCA_001661135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/661/135/GCA_001661135.1_ASM166113v1	-	34769
Candidatus Protochlamydia amoebophila	362787	PRJNA242500	242500	PVC group	Chlamydiae	2.39768	34.8	-	JSAN01	178	2040	1775	1/2/15	3/29/17	Contig	University of Vienna	SAMN03083510	GCA_000813625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/625/GCA_000813625.1_EI2_v1	25069652	EI2
Neisseria gonorrhoeae	485	PRJNA278367	278367	Proteobacteria	Betaproteobacteria	2.23237	52.4	chromosome:NZ_CP012026.1/CP012026.1	-	1	2633	2291	7/7/15	4/11/17	Complete Genome	Centers for Disease Control and Prevention	SAMN03459415	GCA_001047225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/225/GCA_001047225.1_ASM104722v1	26358608	FA19
Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1921	1454606	PRJNA236676	236676	Proteobacteria	Gammaproteobacteria	4.48837	52.4	chromosome:NZ_CP007540.2/CP007540.2	-	1	4510	4256	4/20/15	4/26/17	Complete Genome	USDA-ARS-USMARC	SAMN02716891	GCA_000973665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/665/GCA_000973665.2_ASM97366v2	-	USDA-ARS-USMARC-1921
Synechococcus sp. CC9311	64471	PRJNA12530	12530	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.60675	52.4	chromosome:NC_008319.1/CP000435.1	-	1	2734	2663	9/1/06	4/17/17	Complete Genome	TIGR	SAMN02604031	GCA_000014585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/585/GCA_000014585.1_ASM1458v1	16938853	CC9311
Neisseria gonorrhoeae MS11	528354	PRJNA32795	32795	Proteobacteria	Betaproteobacteria	2.23779	52.3983	chromosome:NC_022240.1/CP003909.1; plasmid unnamed:NC_022243.1/CP003910.1	-	2	2656	2291	9/3/13	3/24/17	Complete Genome	Broad Institute	SAMN02596923	GCA_000156855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/855/GCA_000156855.2_ASM15685v2	-	MS11
Neisseria gonorrhoeae NCCP11945	521006	PRJNA29335	29335	Proteobacteria	Betaproteobacteria	2.23618	52.3983	chromosome:NC_011035.1/CP001050.1; plasmid pNGK:NC_011034.1/CP001051.1	-	2	2646	2291	7/9/08	4/11/17	Complete Genome	Korea Centers for Disease Control and Prevention	SAMN02603475	GCA_000020105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/105/GCA_000020105.1_ASM2010v1	18586945	NCCP11945
Acetobacter sp. SLV-7	1633874	PRJNA279108	279108	Proteobacteria	Alphaproteobacteria	3.1064	52.3948	chromosome:NZ_CP011120.1/CP011120.1; plasmid unnamed1:NZ_CP011121.1/CP011121.1; plasmid unnamed2:NZ_CP011122.1/CP011122.1; plasmid unnamed3:NZ_CP011123.1/CP011123.1	-	4	3009	2787	4/22/16	4/12/17	Complete Genome	Chung-Ang University	SAMN03437041	GCA_001628715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/715/GCA_001628715.1_ASM162871v1	-	SLV-7
Geobacillus sp. Y412MC52	550542	PRJNA30797	30797	Terrabacteria group	Firmicutes	3.67394	52.3129	chromosome:NC_014915.1/CP002442.1; plasmid pGYMC5201:NC_014916.1/CP002443.1	-	2	3757	3473	1/7/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713574	GCA_000174795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/795/GCA_000174795.2_ASM17479v2	26819654	Y412MC52
Geobacillus sp. Y412MC61	544556	PRJNA30537	30537	Terrabacteria group	Firmicutes	3.6679	52.3128	chromosome:NC_013411.1/CP001794.1; plasmid pGYMC6101:NC_013412.1/CP001795.1	-	2	3750	3458	10/15/09	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00017500	GCA_000024705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/705/GCA_000024705.1_ASM2470v1	-	Y412MC61
Crocosphaera watsonii WH 0003	423471	PRJNA61839	61839	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.8905	37.7	-	AESD01	1126	5706	4933	11/16/11	5/18/17	Contig	University of California at Santa Cruz	SAMN02471692	GCA_000235665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/665/GCA_000235665.2_ASM23566v2	22232617	WH 0003
Exiguobacterium sibiricum 7-3	1397698	PRJNA218047	218047	Terrabacteria group	Firmicutes	3.08428	46.9	-	JHZS01	7	3153	3078	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743965	GCA_000620865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/865/GCA_000620865.1_ASM62086v1	25323723	3-Jul
Rickettsia sibirica subsp. sibirica BJ-90	1130827	PRJNA80725	80725	Proteobacteria	Alphaproteobacteria	1.25473	32.4	-	AHIZ01	8	1515	1260	2/3/12	4/8/17	Contig	Unite des Rickettsies	SAMN02471340	GCA_000246715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/715/GCA_000246715.2_ASM24671v2	22493192	BJ-90
Brucella ovis 63/96	1169230	PRJNA173529	173529	Proteobacteria	Alphaproteobacteria	3.27902	57.2	-	AQKN01	3	3380	3022	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN00839726	GCA_000370885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/885/GCA_000370885.1_Bruc_ovis_63_96_V1	-	63/96
Neisseria gonorrhoeae	485	PRJEB6403	251923	Proteobacteria	Betaproteobacteria	2.23024	52.3	chromosome 1:NZ_LT906440.1/LT906440.1	-	1	2650	2248	8/15/17	8/28/17	Complete Genome	SC	SAMEA4076741	GCA_900186875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/875/GCA_900186875.1_49677_F01	-	NCTC13798
Photorhabdus luminescens	29488	PRJNA259697	259697	Proteobacteria	Gammaproteobacteria	5.59672	42.9	-	JQOC01	85	4878	4443	10/22/14	4/11/17	Scaffold	Guangdong Entomological Institute	SAMN03010541	GCA_000767775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/775/GCA_000767775.1_ASM76777v1	25502667	LN2
Salmonella enterica	28901	PRJNA354244	354244	Proteobacteria	Gammaproteobacteria	4.73488	52.3	chromosome:NZ_CP022490.1/CP022490.1	-	1	4796	4534	7/27/17	8/1/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN06044997	GCA_002234775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/234/775/GCA_002234775.1_ASM223477v1	-	SA20026289
Neisseria lactamica	486	PRJNA331097	331097	Proteobacteria	Betaproteobacteria	2.14672	52.3	chromosome:NZ_CP019894.1/CP019894.1	-	1	2292	2062	3/7/17	4/6/17	Complete Genome	University of Southampton	SAMN05437355	GCA_002022745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/745/GCA_002022745.1_ASM202274v1	-	Y92-1009
Salmonella enterica subsp. enterica serovar Blegdam str. S-1824	1240694	PRJNA177073	177073	Proteobacteria	Gammaproteobacteria	4.69398	52.3	chromosome:NZ_CP019406.1/CP019406.1	-	1	4774	4490	1/30/17	4/29/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN04160822	GCA_001975265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/265/GCA_001975265.1_ASM197526v1	-	S-1824
Myxococcus xanthus DZ2	1198133	PRJNA168264	168264	Proteobacteria	delta/epsilon subdivisions	9.27118	68.9	-	AKYI02	87	7550	7292	7/13/12	5/19/17	Contig	University of Iowa	SAMN02471831	GCA_000278585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/585/GCA_000278585.2_ASM27858v2	23661486	DZ2
Leifsonia xyli	1575	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.65316	60.8	-	JVKI01	27	2434	2349	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197546	GCA_001063195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/195/GCA_001063195.1_ASM106319v1	26230489	356_LXYL
Salmonella enterica subsp. enterica serovar Bergen str. ST350	1240708	PRJNA177119	177119	Proteobacteria	Gammaproteobacteria	4.80183	52.3	chromosome:NZ_CP019405.1/CP019405.1	-	1	4886	4604	1/30/17	3/2/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN04160814	GCA_001975325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/325/GCA_001975325.1_ASM197532v1	-	ST350
Chromobacterium violaceum	536	PRJNA269999	269999	Proteobacteria	Betaproteobacteria	4.87067	64.7	-	JWPW01	89	4569	4408	12/31/14	4/2/17	Contig	University of Malaya	SAMN03261527	GCA_000812485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/485/GCA_000812485.1_ASM81248v1	-	GN5
Salmonella enterica subsp. enterica serovar Djakarta str. S-1087	1242091	PRJNA177208	177208	Proteobacteria	Gammaproteobacteria	4.66886	52.3	chromosome:NZ_CP019409.1/CP019409.1	-	1	4696	4362	1/30/17	3/2/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN04160823	GCA_001975365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/365/GCA_001975365.1_ASM197536v1	-	S-1087
Salmonella enterica subsp. enterica serovar Johannesburg str. ST203	1242101	PRJNA177234	177234	Proteobacteria	Gammaproteobacteria	4.65179	52.3	chromosome:NZ_CP019411.1/CP019411.1	-	1	4743	4473	1/30/17	3/2/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN04160815	GCA_001975405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/405/GCA_001975405.1_ASM197540v1	-	ST203
Salmonella enterica subsp. enterica serovar Koessen str. S-1501	1242105	PRJNA177317	177317	Proteobacteria	Gammaproteobacteria	4.56617	52.3	chromosome:NZ_CP019412.1/CP019412.1	-	1	4620	4341	1/30/17	3/2/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN04160824	GCA_001975425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/425/GCA_001975425.1_ASM197542v1	-	S-1501
Salmonella enterica subsp. enterica serovar Manchester str. ST278	1242108	PRJNA177327	177327	Proteobacteria	Gammaproteobacteria	4.53275	52.3	chromosome:NZ_CP019414.1/CP019414.1	-	1	4584	4324	1/30/17	3/2/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN04160817	GCA_001975515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/515/GCA_001975515.1_ASM197551v1	-	ST278
Salmonella enterica subsp. enterica serovar Moscow str. S-1843	1243579	PRJNA177578	177578	Proteobacteria	Gammaproteobacteria	4.6904	52.3	chromosome:NZ_CP019415.1/CP019415.1	-	1	4784	4453	1/30/17	3/2/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN04160826	GCA_001975555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/555/GCA_001975555.1_ASM197555v1	-	S-1843
Bordetella avium	521	PRJNA270177	270177	Proteobacteria	Betaproteobacteria	3.69464	61.6	-	JWMK01	68	3414	3241	1/2/15	4/10/17	Scaffold	University of Sao Paulo	SAMN03264049	GCA_000813405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/405/GCA_000813405.1_ASM81340v1	25767244	Nh1210
Rhodopirellula baltica WH47	991778	PRJNA63253	63253	PVC group	Planctomycetes	7.03332	55.5	-	AFAR01	332	5858	5416	4/6/11	5/19/17	Contig	MIMAS	SAMN00713600	GCA_000195185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/185/GCA_000195185.2_ASM19518v2	23273849	WH47
Salmonella enterica subsp. enterica serovar Antsalova str. S01-0511	1242087	PRJNA177204	177204	Proteobacteria	Gammaproteobacteria	4.64809	52.3	chromosome:NZ_CP019116.1/CP019116.1	-	1	4709	4460	1/18/17	3/2/17	Complete Genome	Laboratory for Foodnorne Zoonoses	SAMN04160831	GCA_001956735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/735/GCA_001956735.1_ASM195673v1	-	S01-0511
Salmonella enterica subsp. enterica serovar Cerro	340188	PRJNA252640	252640	Proteobacteria	Gammaproteobacteria	4.60244	52.3	chromosome:NZ_CP008925.1/CP008925.1	-	1	4662	4383	1/10/17	3/2/17	Complete Genome	Wuhan University	SAMN02910521	GCA_001941405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/405/GCA_001941405.1_ASM194140v1	-	87
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA288835	288835	Proteobacteria	Gammaproteobacteria	4.79979	52.3	chromosome:NZ_CP012144.1/CP012144.1	-	1	4871	4630	11/30/15	3/1/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN03839051	GCA_001454965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/965/GCA_001454965.1_ASM145496v1	-	FORC_020
Salmonella enterica subsp. enterica serovar Panama str. ATCC 7378	1124961	PRJNA78385	78385	Proteobacteria	Gammaproteobacteria	4.55558	52.3	chromosome:NZ_CP012346.1/CP012346.1	-	1	4611	4319	8/12/15	2/28/17	Complete Genome	FDA	SAMN01805327	GCA_000486765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/765/GCA_000486765.2_ASM48676v2	26988049	ATCC 7378
Salmonella enterica subsp. enterica serovar Thompson str. ATCC 8391	935705	PRJNA61153	61153	Proteobacteria	Gammaproteobacteria	4.69043	52.3	chromosome:NZ_CP011396.1/CP011396.1	-	1	4720	4478	5/11/15	2/27/17	Complete Genome	FDA	SAMN01823736	GCA_000486365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/365/GCA_000486365.2_ASM48636v2	24158624	ATCC 8391
Salmonella enterica subsp. enterica serovar Newport str. CDC 2010K-2159	1454627	PRJNA236696	236696	Proteobacteria	Gammaproteobacteria	4.79039	52.3	chromosome:NZ_CP007559.1/CP007559.1	-	1	4867	4625	4/20/15	2/27/17	Complete Genome	USDA-ARS-USMARC	SAMN02716903	GCA_000973685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/685/GCA_000973685.1_ASM97368v1	-	CDC 2010K-2159
Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1903	1454603	PRJNA236673	236673	Proteobacteria	Gammaproteobacteria	4.56546	52.3	chromosome:NZ_CP007222.1/CP007222.1	-	1	4613	4361	3/4/15	2/27/17	Complete Genome	USDA-ARS-USMARC	SAMN02712197	GCA_000940975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/975/GCA_000940975.1_ASM94097v1	-	USDA-ARS-USMARC-1903
Rhodobacter capsulatus	1061	PRJNA298686	298686	Proteobacteria	Alphaproteobacteria	3.67574	66.5	-	LLVU01	64	3480	3331	10/22/15	4/4/17	Scaffold	"Istanbul Technical University, Institute of Science"	SAMN04166217	GCA_001402715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/715/GCA_001402715.1_ASM140271v1	27284151	B41
Bartonella quintana BQ2-D70	1402978	PRJNA221536	221536	Proteobacteria	Alphaproteobacteria	1.57195	38.8	-	AZZV01	3	1390	1218	1/8/14	4/10/17	Scaffold	Broad Institute	SAMN02364137	GCA_000516755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/755/GCA_000516755.1_Bart_quin_BQ2-D70_V1	-	BQ2-D70
Streptococcus uberis	1349	PRJNA263023	263023	Terrabacteria group	Firmicutes	2.14944	36.1	-	JRQN01	96	2093	1666	11/21/14	4/2/17	Contig	"CIAD, A.C."	SAMN03093229	GCA_000785785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/785/GCA_000785785.1_CAIM1894t_spades_scaffold	-	CAIM 1894
Salmonella enterica subsp. enterica serovar Infantis	595	PRJEB7580	270481	Proteobacteria	Gammaproteobacteria	4.71068	52.3	chromosome 1:NZ_LN649235.1/LN649235.1	-	1	4764	4520	12/16/14	2/27/17	Complete Genome	WTSI	SAMEA3106395	GCA_000953495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/495/GCA_000953495.1_SINFA	25676749	1326/28
Salmonella enterica subsp. enterica serovar Newport str. CVM 21554	858308	PRJNA49977	49977	Proteobacteria	Gammaproteobacteria	4.72669	52.3	chromosome:CP009565.1	-	1	4427	2783	10/14/14	4/20/15	Complete Genome	FDA	SAMN01813483	GCA_000272795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/795/GCA_000272795.2_ASM27279v2	-	CVM 21554
Salmonella enterica subsp. enterica serovar Bredeney str. CFSAN001080	1194154	PRJNA167391	167391	Proteobacteria	Gammaproteobacteria	4.60385	52.3	chromosome:NZ_CP007533.1/CP007533.1	-	1	4621	4377	4/4/14	2/26/17	Complete Genome	FDA	SAMN01813431	GCA_000487775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/775/GCA_000487775.2_ASM48777v2	24158624	CFSAN001080
Salmonella enterica subsp. enterica serovar Abaetetuba str. ATCC 35640	1208611	PRJNA170546	170546	Proteobacteria	Gammaproteobacteria	4.5476	52.3	chromosome:NZ_CP007532.1/CP007532.1	-	1	4588	4306	4/4/14	2/26/17	Complete Genome	FDA	SAMN01813419	GCA_000487915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/915/GCA_000487915.2_ASM48791v2	24158624	ATCC 35640
Geobacillus sp. GHH01	1233873	PRJNA180997	180997	Terrabacteria group	Firmicutes	3.58313	52.3	chromosome:NC_020210.1/CP004008.1	-	1	3668	3368	2/4/13	4/8/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02603276	GCA_000336445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/445/GCA_000336445.1_ASM33644v1	23618712	GHH01
Trichodesmium erythraeum 21-75	1045866	PRJNA278651	278651	Terrabacteria group	Cyanobacteria/Melainabacteria group	10.7236	37.3	-	LADK01	8951	-	-	3/26/15	3/26/15	Contig	University of Southern California	SAMN03421191	GCA_000963755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/755/GCA_000963755.2_ASM96375v2	25831533	-
Corynebacterium efficiens YS-314	196164	PRJNA34585	34585	Terrabacteria group	Actinobacteria	3.19016	62.8	-	ACLI01	40	2908	2744	4/27/09	4/7/17	Scaffold	Baylor College of Medicine	SAMN00139182	GCA_000160795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/795/GCA_000160795.1_ASM16079v1	-	YS-314
Geobacillus thermoleovorans CCB_US3_UF5	1111068	PRJNA76489	76489	Terrabacteria group	Firmicutes	3.59662	52.3	chromosome:NC_016593.1/CP003125.1	-	1	3709	3437	12/2/11	4/7/17	Complete Genome	Centre for Chemical Biology (CCB@USM)	SAMN02603099	GCA_000236605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/605/GCA_000236605.1_ASM23660v1	-	CCB_US3_UF5
Oceanobacillus iheyensis	182710	PRJEB19319	371340	Terrabacteria group	Firmicutes	3.90453	35.1	-	FUFO01	11	3875	3748	2/6/17	4/17/17	Scaffold	URMITE	SAMEA78895168	GCA_900162625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/625/GCA_900162625.1_PRJEB19319	-	Marseille-P19319
Colwellia psychrerythraea	28229	PRJNA258170	258170	Proteobacteria	Gammaproteobacteria	5.72351	38	-	JQEC01	77	4724	4546	10/6/14	4/9/17	Contig	Oak Ridge National Lab	SAMN02989436	GCA_000764185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/185/GCA_000764185.1_ASM76418v1	-	GAB14E
Neisseria lactamica 020-06	489653	PRJNA13472	13472	Proteobacteria	Betaproteobacteria	2.22061	52.3	chromosome:NC_014752.1/FN995097.1	-	1	2355	2085	11/30/10	3/30/17	Complete Genome	Sanger Institute	SAMEA3138337	GCA_000196295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/295/GCA_000196295.1_ASM19629v1	21092259	020-06
Wolbachia pipientis wMelPop	1317678	PRJNA196671	196671	Proteobacteria	Alphaproteobacteria	1.23916	35.6	-	AQQE01	25	1165	1029	10/17/13	4/9/17	Scaffold	Monash University	SAMN02296948	GCA_000475015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/015/GCA_000475015.1_wMelPop	-	wMelPop
Salmonella enterica subsp. enterica serovar Anatum	58712	PRJNA302481	302481	Proteobacteria	Gammaproteobacteria	4.99536	52.2996	chromosome:NZ_CP013222.1/CP013222.1; plasmid PDM02:NZ_CP013221.1/CP013221.1; plasmid PDM03:NZ_CP013223.1/CP013223.1	-	3	5121	4839	11/20/15	3/1/17	Complete Genome	University of Tulsa	SAMN04274533	GCA_001447115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/447/115/GCA_001447115.1_ASM144711v1	26798111	GT-01
Neisseria gonorrhoeae	485	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	2.27889	52.2905	chromosome:NZ_CP020418.1/CP020418.1; plasmid unnamed1:NZ_CP020416.1/CP020416.1; plasmid unnamed2:NZ_CP020417.1/CP020417.1	-	3	2680	2313	3/29/17	4/11/17	Complete Genome	US Food and Drug Administration 	SAMN04875542	GCA_002073615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/615/GCA_002073615.1_ASM207361v1	-	FDAARGOS_205
Geobacillus thermoleovorans	33941	PRJNA310809	310809	Terrabacteria group	Firmicutes	3.49932	52.2886	chromosome:NZ_CP014335.1/CP014335.1; plasmid pLDW-1:NZ_CP014336.1/CP014336.1	-	2	3638	3345	4/5/16	4/12/17	Complete Genome	Kyungpook National University	SAMN04455789	GCA_001610955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/955/GCA_001610955.1_ASM161095v1	-	KCTC 3570
Salmonella enterica subsp. enterica serovar Minnesota	70803	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.00483	52.2846	chromosome:NZ_CP017720.1/CP017720.1; plasmid pCFSAN017963_01:NZ_CP017721.1/CP017721.1; plasmid pCFSAN017963_02:NZ_CP017722.1/CP017722.1	-	3	5137	4805	6/15/17	6/19/17	Complete Genome	Center for Food Safety and Applied Nutrition	SAMN02800603	GCA_002196535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/535/GCA_002196535.1_ASM219653v1	-	CFSAN017963
Salmonella enterica subsp. enterica serovar Rubislaw str. ATCC 10717	938143	PRJNA61359	61359	Proteobacteria	Gammaproteobacteria	4.7698	52.2835	chromosome:NZ_CP019192.1/CP019192.1; plasmid pATCC10717:NZ_CP019193.1/CP019193.1	-	2	4807	4522	1/17/17	8/21/17	Complete Genome	FDA	SAMN01823732	GCA_000486585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/585/GCA_000486585.2_ASM48658v2	24158624	ATCC 10717
Cupriavidus metallidurans H1130	1395123	PRJNA217716	217716	Proteobacteria	Betaproteobacteria	7.22316	63.5	-	AXBU01	102	6700	6416	11/13/13	4/2/17	Contig	Belgian Nuclear Research Center (SCK-CEN)	SAMN02339886	GCA_000496715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/715/GCA_000496715.1_H1130_v1	24336383	H1130
Salmonella enterica	28901	PRJNA354244	354244	Proteobacteria	Gammaproteobacteria	4.8026	52.2823	chromosome:NZ_CP022497.1/CP022497.1; plasmid unnamed1:NZ_CP022498.1/CP022498.1; plasmid unnamed2:NZ_CP022499.1/CP022499.1	-	3	4893	4596	7/27/17	8/1/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN06045126	GCA_002234795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/234/795/GCA_002234795.1_ASM223479v1	-	SA20084699
Acetobacter pasteurianus subsp. ascendens	481146	PRJNA386748	386748	Proteobacteria	Alphaproteobacteria	3.28583	52.2771	chromosome:NZ_CP021524.1/CP021524.1; plasmid pAP1447-1:NZ_CP021525.1/CP021525.1; plasmid pAP1447-2:NZ_CP021526.1/CP021526.1; plasmid pAP1447-3:NZ_CP021527.1/CP021527.1	-	4	3118	2918	6/6/17	6/8/17	Complete Genome	Microbial Institiue for Fermentation Industry	SAMN07125917	GCA_002173775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/775/GCA_002173775.1_ASM217377v1	-	SRCM101447
Streptomyces avermitilis MA-4680 = NBRC 14893	227882	PRJDB1604	237143	Terrabacteria group	Actinobacteria	10.4268	70.6	-	BAVY01	92	9226	8520	10/1/14	3/11/17	Scaffold	National Institute of Technology and Evaluation	SAMD00041820	GCA_000764715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/715/GCA_000764715.1_ASM76471v1	-	NBRC 14893
Geobacter metallireducens RCH3	691164	PRJNA46815	46815	Proteobacteria	delta/epsilon subdivisions	3.7788	59.8	-	AGJM01	89	3453	3325	1/23/12	4/7/17	Contig	JGI	SAMN02261361	GCA_000243475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/475/GCA_000243475.2_ASM24347v2	-	RCH3
Salmonella enterica	28901	PRJNA354244	354244	Proteobacteria	Gammaproteobacteria	4.90872	52.2768	chromosome:NZ_CP022491.1/CP022491.1; plasmid unnamed1:NZ_CP022492.1/CP022492.1; plasmid unnamed2:NZ_CP022493.1/CP022493.1	-	3	5000	4734	7/27/17	8/1/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN06045033	GCA_002234735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/234/735/GCA_002234735.1_ASM223473v1	-	SA20031783
Salmonella enterica subsp. enterica serovar Typhimurium str. U288	1171376	PRJNA157919	157919	Proteobacteria	Gammaproteobacteria	5.01706	52.2438	chromosome:NC_021151.1/CP003836.1; plasmid pSTU288-1:NC_021155.1/CP004058.1; plasmid pSTU288-2:NC_021156.1/CP004059.1; plasmid pSTU288-3:NC_021157.1/CP004060.1	-	4	5165	4898	4/23/13	2/26/17	Complete Genome	University of Nottingham	SAMN02604233	GCA_000380325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/325/GCA_000380325.1_ASM38032v1	-	U288
Salmonella enterica subsp. enterica serovar Typhimurium str. T000240	718274	PRJNA45951	45951	Proteobacteria	Gammaproteobacteria	5.06999	52.2422	chromosome:NC_016860.1/AP011957.1; plasmid pSTMDT12_L:NC_016861.1/AP011958.1; plasmid pSTMDT12_S:NC_016862.1/AP011959.1	-	3	5239	4958	11/30/10	2/26/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00000683	GCA_000283735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/735/GCA_000283735.1_ASM28373v1	21098248	T000240
Thermobifida fusca TM51	1169414	PRJNA157355	157355	Terrabacteria group	Actinobacteria	3.59927	67.6	-	AOSG01	88	3148	3006	5/28/13	4/8/17	Contig	BAYGEN	SAMN02471029	GCA_000401915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/915/GCA_000401915.1_ASM40191v1	23846276	TM51
Listeria innocua FSL J1-023	702455	PRJNA42853	42853	Terrabacteria group	Firmicutes	2.91401	37.4	chromosome:NZ_CM001049.1/CM001049.1	ADXH01	1	6262	5523	12/6/10	2/26/17	Chromosome	Life Technologies Corporation	SAMN01909077	GCA_000183905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/905/GCA_000183905.1_ASM18390v1	21126366	FSL J1-023
Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633	439843	PRJNA19459	19459	Proteobacteria	Gammaproteobacteria	4.82389	52.2367	chromosome:NC_011094.1/CP001127.1; plasmid pCVM19633_110:NC_011092.1/CP001125.1; plasmid pCVM19633_4:NC_011093.1/CP001126.1	-	3	4925	4655	7/30/08	2/26/17	Complete Genome	TIGR	SAMN02604064	GCA_000020745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/745/GCA_000020745.1_ASM2074v1	21602358	CVM19633
Salmonella enterica subsp. enterica serovar Typhimurium str. L-3553	996633	PRJDA63645	63645	Proteobacteria	Gammaproteobacteria	5.18445	52.2307	chromosome:NZ_AP014565.1/AP014565.1; plasmid pST3553:NZ_AP014566.1/AP014566.1	-	2	5378	5106	6/27/14	5/10/17	Complete Genome	National Institute of Infectious Diseases	SAMD00002684	GCA_000828595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/595/GCA_000828595.1_ASM82859v1	-	L-3553
Citrobacter freundii CFNIH1	1333848	PRJNA202883	202883	Proteobacteria	Gammaproteobacteria	5.37133	52.2253	chromosome:NZ_CP007557.1/CP007557.1; plasmid pKEC-a3c:NZ_CP007558.1/CP007558.1	-	2	5420	5068	4/28/14	4/2/17	Complete Genome	NISC	SAMN02713684	GCA_000648515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/515/GCA_000648515.1_ASM64851v1	-	CFNIH1
Salmonella enterica subsp. enterica serovar Pullorum str. ATCC 9120	1029979	PRJNA66671	66671	Proteobacteria	Gammaproteobacteria	4.78149	52.2199	chromosome:NZ_CP012347.1/CP012347.1; plasmid pCFSAN000725_01:NZ_CP012348.1/CP012348.1	-	2	4875	4413	8/12/15	2/28/17	Complete Genome	FDA	SAMN01805317	GCA_000330485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/485/GCA_000330485.2_ASM33048v2	26798102	ATCC 9120
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA242737	242737	Proteobacteria	Gammaproteobacteria	4.85739	52.2174	chromosome:NZ_CP007804.1/CP007804.2; plasmid pSLT_VNP20009:NZ_CP008745.1/CP008745.1	-	2	4987	4737	6/27/14	2/26/17	Complete Genome	Virginia Tech	SAMN02798502	GCA_000715155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/155/GCA_000715155.2_ASM71515v2	-	VNP20009
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJEB20926	387257	Proteobacteria	Gammaproteobacteria	4.90526	52.2172	chromosome 1:NZ_LT855376.1/LT855376.1; plasmid 2:NZ_LT855377.1/LT855377.1	-	2	5020	4757	5/24/17	6/4/17	Complete Genome	UNIVERSITY OF LIVERPOOL	SAMEA104087369	GCA_900184385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/184/385/GCA_900184385.1_STMU2UK	-	-
Salmonella enterica subsp. enterica serovar Typhimurium str. SARA13	1029978	PRJNA66667	66667	Proteobacteria	Gammaproteobacteria	4.91363	52.2172	chromosome:NZ_CP017728.1/CP017728.1; plasmid pSARA13:NZ_CP017729.1/CP017729.1	-	2	5019	4737	10/27/16	3/3/17	Complete Genome	FDA	SAMN01823705	GCA_000486345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/345/GCA_000486345.2_ASM48634v2	24158624	SARA13
Salmonella enterica subsp. enterica serovar Typhimurium str. DT2	568709	PRJEB4149	222244	Proteobacteria	Gammaproteobacteria	4.90864	52.2172	chromosome I:NC_022544.1/HG326213.1; plasmid pSLT:NZ_LN999012.1/LN999012.1	-	2	5019	4751	9/30/13	3/1/17	Complete Genome	WTSI	SAMEA2272227	GCA_000493535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/535/GCA_000493535.2_DT2	-	DT2
Cytophaga hutchinsonii ATCC 33406	269798	PRJEB17912	353819	FCB group	Bacteroidetes/Chlorobi group	4.37578	38.7	-	FPJX01	36	3744	3645	11/17/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487930	GCA_900119565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/565/GCA_900119565.1_IMG-taxon_2616644809_annotated_assembly	-	DSM 1761
Ruminococcus albus 7 = DSM 20455	697329	PRJNA221059	221059	Terrabacteria group	Firmicutes	4.3323	43.6	-	JHYT01	120	3973	3720	4/8/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02743985	GCA_000621285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/285/GCA_000621285.1_ASM62128v1	-	DSM 20455
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA317167	317167	Proteobacteria	Gammaproteobacteria	4.94013	52.2171	chromosome:NZ_CP015157.1/CP015157.1; plasmid unnamed:NZ_CP015158.1/CP015158.1	-	2	5075	4796	8/16/16	3/1/17	Complete Genome	North Carolina State University	SAMN04600271	GCA_001705365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/365/GCA_001705365.1_ASM170536v1	-	NC983
Nitrosomonas europaea	915	PRJEB16577	349883	Proteobacteria	Betaproteobacteria	2.76028	50.7	-	FNNX01	91	2659	2499	10/22/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216310	GCA_900106625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/625/GCA_900106625.1_IMG-taxon_2671180134_annotated_assembly	-	Nm50
Dichelobacter nodosus	870	PRJNA290423	290423	Proteobacteria	Gammaproteobacteria	1.45242	44.1	-	LGVW01	36	1428	1342	8/7/15	4/10/17	Contig	University of Southampton	SAMN03891581	GCA_001263335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/335/GCA_001263335.1_ASM126333v1	26404593	VPI 2340
Methylococcus capsulatus str. Texas = ATCC 19069	1224744	PRJNA187109	187109	Proteobacteria	Gammaproteobacteria	3.26626	63.5	-	AUKJ01	20	3035	2904	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441148	GCA_000424685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/685/GCA_000424685.1_ASM42468v1	-	ATCC 19069
Rickettsia conorii subsp. indica ITTR	1162281	PRJNA89511	89511	Proteobacteria	Alphaproteobacteria	1.24948	32.4	-	AJHC01	10	1530	1189	4/2/12	4/11/17	Contig	URMITE CNRS UMR 6236 IRD 198	SAMN02471339	GCA_000257435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/435/GCA_000257435.1_RcoIn1.0	22628514	ITTR
Salmonella enterica	28901	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.95139	52.2171	chromosome:NZ_CP014051.1/CP014051.1; plasmid unnamed:NZ_CP014050.1/CP014050.1	-	2	5058	4787	2/11/16	3/1/17	Complete Genome	US Food and Drug Administration 	SAMN03996249	GCA_001558355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/355/GCA_001558355.1_ASM155835v1	-	LT2
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2	99287	PRJNA241	241	Proteobacteria	Gammaproteobacteria	4.95138	52.2171	chromosome:NC_003197.2/AE006468.2; plasmid pSLT:NC_003277.2/AE006471.2	-	2	4716	4552	10/26/01	7/26/17	Complete Genome	Washington University Genome Sequencing Center	SAMN02604315	GCA_000006945.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/006/945/GCA_000006945.2_ASM694v2	11677609	LT2; SGSC 1412; ATCC 700720
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA294303	294303	Proteobacteria	Gammaproteobacteria	4.98363	52.217	chromosome:NZ_CP013720.1/CP013720.1; plasmid pRM10607:NZ_CP013721.1/CP013721.1	-	2	5135	4842	3/2/17	3/9/17	Complete Genome	USDA ARS	SAMN04125827	GCA_002009155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/155/GCA_002009155.1_ASM200915v1	-	RM10607
Salmonella enterica subsp. enterica serovar Typhimurium str. 798	1008297	PRJNA66023	66023	Proteobacteria	Gammaproteobacteria	4.9701	52.217	chromosome:NC_017046.1/CP003386.1; plasmid p798_93:NC_017054.1/CP003387.1	-	2	5095	4812	3/15/12	2/26/17	Complete Genome	University of Minnesota	SAMN02604223	GCA_000252875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/875/GCA_000252875.1_ASM25287v1	22937065	798
Bacteroides stercoris CC31F	1073351	PRJNA71531	71531	FCB group	Bacteroidetes/Chlorobi group	4.10266	46	-	ATFP01	10	3504	3315	6/21/13	4/8/17	Scaffold	Broad Institute	SAMN02596993	GCA_000413395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/395/GCA_000413395.1_Bact_ster_CC31F_V1	-	CC31F
Coprococcus eutactus	33043	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.17511	43.8	-	CYYZ01	21	2835	2707	10/1/15	4/11/17	Contig	SC	SAMEA3545237	GCA_001404315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/315/GCA_001404315.1_13414_6_13	-	2789STDY5608829
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S	588858	PRJNA33067	33067	Proteobacteria	Gammaproteobacteria	4.9641	52.217	chromosome:NC_016856.1/CP001363.1; plasmid unnamed:NC_016855.1/CP001362.1	-	2	5095	4843	11/13/09	3/22/17	Complete Genome	University of Arizona	SAMN02604137	GCA_000022165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/165/GCA_000022165.1_ASM2216v1	19897643	14028S
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA288330	288330	Proteobacteria	Gammaproteobacteria	5.01001	52.2169	chromosome:NZ_CP014356.1/CP014356.1; plasmid pSO2_STV:NZ_CP014357.1/CP014357.1	-	2	5151	4867	2/26/16	3/1/17	Complete Genome	"Instituto de Biotecnologia, UNAM"	SAMN03798428	GCA_001576275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/275/GCA_001576275.1_ASM157627v1	27081133	SO2
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA304181	304181	Proteobacteria	Gammaproteobacteria	5.0068	52.2169	chromosome:NZ_CP014536.1/CP014536.1; plasmid pSO3_STV:NZ_CP014537.1/CP014537.1	-	2	5143	4887	2/26/16	3/1/17	Complete Genome	"Instituto de Biotecnologia, UNAM"	SAMN04296382	GCA_001577505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/505/GCA_001577505.1_ASM157750v1	27103717	SO3
Treponema denticola H1-T	999431	PRJNA64913	64913	Spirochaetes	Spirochaetia	2.9297	37.9501	chromosome:NZ_CM001794.1/CM001794.1	AGDW01	1	5570	5377	2/7/13	4/1/17	Chromosome	Broad Institute	SAMN02596722	GCA_000340605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/605/GCA_000340605.1_Trep_dent_H1-T_V1	-	H1-T
Bacteroides uniformis CL03T12C37	997890	PRJNA64835	64835	FCB group	Bacteroidetes/Chlorobi group	4.9228	46.2	-	AGXY01	14	4219	4035	6/25/12	5/18/17	Scaffold	Broad Institute	SAMN02463933	GCA_000273275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/275/GCA_000273275.1_Bact_unif_CL03T12C37_V1	-	CL03T12C37
Parabacteroides merdae CL03T12C32	999420	PRJNA64891	64891	FCB group	Bacteroidetes/Chlorobi group	4.93062	45.3	-	AGZQ01	13	4211	3950	10/19/12	6/12/17	Scaffold	Broad Institute	SAMN02463941	GCA_000307345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/345/GCA_000307345.1_Para_merd_CL03T12C32_V1	-	CL03T12C32
Collinsella aerofaciens	74426	PRJEB10915	297013	Terrabacteria group	Actinobacteria	2.18792	60.1	-	CZAQ01	76	1905	1807	10/1/15	4/11/17	Contig	SC	SAMEA3545365	GCA_001404695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/695/GCA_001404695.1_14207_7_25	-	2789STDY5834902
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA344760	344760	Proteobacteria	Gammaproteobacteria	4.91257	52.2166	chromosome:NZ_CP017617.1/CP017617.1; plasmid unnamed1:NZ_CP017618.1/CP017618.1; plasmid unnamed2:NZ_CP017619.1/CP017619.1	-	3	5065	4619	11/28/16	3/5/17	Complete Genome	Canadian Food Inspection Agency	SAMN05832834	GCA_001886995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/995/GCA_001886995.1_ASM188699v1	-	22495
Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1	990282	PRJNA63211	63211	Proteobacteria	Gammaproteobacteria	4.91115	52.2152	chromosome:NC_016863.1/CP002614.1; plasmid pSTUK-100:NC_016864.1/CP002615.1	-	2	5018	4773	5/13/11	2/26/17	Complete Genome	Arizona State University	SAMN02602986	GCA_000213635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/635/GCA_000213635.1_ASM21363v1	21622747	UK-1
Bacteroides caccae CL03T12C61	997873	PRJNA64801	64801	FCB group	Bacteroidetes/Chlorobi group	5.49312	42.8	-	AGXF01	6	4684	4432	6/25/12	5/18/17	Scaffold	Broad Institute	SAMN02463916	GCA_000273725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/725/GCA_000273725.1_Bact_cacc_CL03T12C61_V1	-	CL03T12C61
Desulfovibrio piger ATCC 29098	411464	PRJNA18161	18161	Proteobacteria	delta/epsilon subdivisions	2.86722	62.8	-	ABXU01	47	2535	2388	10/23/08	4/7/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008819	GCA_000156375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/375/GCA_000156375.1_ASM15637v1	-	ATCC 29098
Dorea longicatena AGR2136	1280698	PRJNA185710	185710	Terrabacteria group	Firmicutes	3.59508	41	-	AUJS01	137	3605	3244	7/10/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02440672	GCA_000424345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/345/GCA_000424345.1_ASM42434v1	-	AGR2136
[Clostridium] symbiosum WAL-14673	742741	PRJNA46401	46401	Terrabacteria group	Firmicutes	4.91696	48.2	-	ADLR01	55	4542	4038	2/16/11	5/18/17	Scaffold	Broad Institute	SAMN02463858	GCA_000189615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/615/GCA_000189615.1_Clos_symb_WAL_14673_V2	-	WAL-14673
Ruminococcus gnavus CC55_001C	1073375	PRJNA71557	71557	Terrabacteria group	Firmicutes	3.18186	43.1	-	AZJF01	5	3041	2896	12/10/13	4/10/17	Scaffold	Broad Institute	SAMN01162086	GCA_000507805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/507/805/GCA_000507805.1_Rumi_gnav_CC55_001C_V1	-	CC55_001C
Salmonella enterica subsp. enterica serovar Newport str. SL254	423368	PRJNA18747	18747	Proteobacteria	Gammaproteobacteria	5.00772	52.2145	chromosome:NC_011080.1/CP001113.1; plasmid pSL254_3:NC_011079.1/CP001112.1; plasmid pSN254:NC_009140.1/CP000604.1	-	3	5141	4898	7/24/08	2/26/17	Complete Genome	TIGR	SAMN02604062	GCA_000016045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/045/GCA_000016045.1_ASM1604v1	21602358	SL254
[Clostridium] scindens VE202-05	1232441	PRJDB524	219218	Terrabacteria group	Firmicutes	3.91239	47.5	-	BAHS01	102	3903	2897	9/14/13	4/9/17	Contig	The University of Tokyo	SAMD00004073	GCA_000471845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/845/GCA_000471845.1_ASM47184v1	-	VE202-05
Actinomyces odontolyticus F0309	649742	PRJNA38309	38309	Terrabacteria group	Actinobacteria	2.432	65.1	-	ACYT02	6	2162	1999	9/29/09	4/7/17	Scaffold	WUGSC	SAMN00008754	GCA_000163415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/415/GCA_000163415.1_ASM16341v1	-	F0309
Parvimonas micra ATCC 33270	411465	PRJNA18169	18169	Terrabacteria group	Firmicutes	1.70387	28.7	-	ABEE02	16	1652	1557	7/20/07	4/7/17	Scaffold	Washington University Genome Sequencing Center	SAMN00627099	GCA_000154405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/405/GCA_000154405.1_ASM15440v1	-	ATCC 33270
Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1736	1454586	PRJNA236657	236657	Proteobacteria	Gammaproteobacteria	4.8646	52.2099	chromosome:NZ_CP014657.1/CP014657.1; plasmid pSAN1-1736:NZ_CP014658.1/CP014658.1	-	2	4959	4716	4/15/16	3/1/17	Complete Genome	USDA-ARS-USMARC	SAMN02716853	GCA_001620115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/115/GCA_001620115.1_ASM162011v1	27257192	USDA-ARS-USMARC-1736
Blautia obeum	40520	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.7317	41.2	-	CYZA01	58	3499	3306	10/1/15	4/4/17	Contig	SC	SAMEA3545246	GCA_001404455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/455/GCA_001404455.1_13414_6_22	-	2789STDY5608838
[Ruminococcus] torques	33039	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.75687	41.2	-	CZBS01	21	2607	2460	10/1/15	4/4/17	Contig	SC	SAMEA3545275	GCA_001405235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/235/GCA_001405235.1_13414_6_51	-	2789STDY5608867
Salmonella enterica subsp. enterica serovar Quebec str. S-1267	1243591	PRJNA177594	177594	Proteobacteria	Gammaproteobacteria	4.64531	52.208	chromosome punamed2:NZ_CP022017.1/CP022017.1; plasmid punamed1:NZ_CP022018.1/CP022018.1; plasmid punamed2:NZ_CP022019.1/CP022019.1	-	3	4684	4391	6/26/17	8/7/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN04160828	GCA_002208315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/315/GCA_002208315.1_ASM220831v1	-	S-1267
Coprococcus comes	410072	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.22115	42.2	-	CYYN01	50	3157	2969	10/1/15	4/11/17	Contig	SC	SAMEA3545240	GCA_001404595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/595/GCA_001404595.1_13414_6_16	-	2789STDY5608832
Bacteroides intestinalis DSM 17393	471870	PRJNA20523	20523	FCB group	Bacteroidetes/Chlorobi group	6.0526	42.8	-	ABJL02	8	4730	4529	1/30/08	5/18/17	Contig	Washington University Genome Sequencing Center	SAMN00000015	GCA_000172175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/175/GCA_000172175.1_ASM17217v1	-	DSM 17393
Salmonella enterica subsp. enterica serovar Paratyphi C str. RKS4594	476213	PRJNA20993	20993	Proteobacteria	Gammaproteobacteria	4.88849	52.2068	chromosome:NC_012125.1/CP000857.1; plasmid pSPCV:NC_012124.1/CP000858.1	-	2	4999	4598	3/3/09	2/26/17	Complete Genome	Genomics Research Center of Harbin Medical	SAMN02603245	GCA_000018385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/385/GCA_000018385.1_ASM1838v1	19229335	RKS4594
Salmonella enterica subsp. enterica serovar Anatum	58712	PRJNA302481	302481	Proteobacteria	Gammaproteobacteria	4.94615	52.202	chromosome:NZ_CP013226.1/CP013226.1; plasmid PDM04:NZ_CP013224.1/CP013224.1; plasmid PDM05:NZ_CP013225.1/CP013225.1	-	3	5057	4779	11/20/15	3/1/17	Complete Genome	University of Tulsa	SAMN04274532	GCA_001447095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/447/095/GCA_001447095.1_ASM144709v1	26798111	GT-38
Ruminococcus lactaris CC59_002D	1073376	PRJNA71573	71573	Terrabacteria group	Firmicutes	3.0869	42.5	-	AZJE01	7	2929	2724	12/10/13	4/9/17	Scaffold	Broad Institute	SAMN01162081	GCA_000507785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/507/785/GCA_000507785.1_Rumi_lact_CC59_002D_V1	-	CC59_002D
Intestinibacter bartlettii	261299	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.00681	28.6	-	CZAH01	23	2710	2624	10/1/15	4/11/17	Contig	SC	SAMEA3545344	GCA_001406775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/775/GCA_001406775.1_14207_7_2	-	2789STDY5834879
Anaerotruncus colihominis	169435	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.78677	54.2	-	CZBE01	83	3875	3686	10/1/15	4/11/17	Contig	SC	SAMEA3545402	GCA_001404495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/495/GCA_001404495.1_14207_7_62	-	2789STDY5834939
Alistipes putredinis	28117	PRJNA321218	321218	FCB group	Bacteroidetes/Chlorobi group	2.37226	54.3	-	MNQH01	55	2144	2038	12/23/16	12/23/16	Scaffold	None	SAMN05717213	GCA_001915335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/335/GCA_001915335.1_ASM191533v1	27819664	-
Marvinbryantia formatexigens	168384	PRJEB15852	347791	Terrabacteria group	Firmicutes	4.52182	49.6	-	FNBY01	54	4253	4063	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660368	GCA_900102475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/475/GCA_900102475.1_IMG-taxon_2599185228_annotated_assembly	-	I-52
Blautia hydrogenotrophica	53443	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.53172	44.9	-	CYXL01	15	3387	3242	10/1/15	4/11/17	Contig	SC	SAMEA3545265	GCA_001404935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/935/GCA_001404935.1_13414_6_41	-	2789STDY5608857
Roseburia faecis	301302	PRJEB9321	298150	Terrabacteria group	Firmicutes	3.33469	43	-	CVRR01	101	3232	3041	10/8/15	4/11/17	Contig	WTSI	SAMEA1710514	GCA_001406815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/815/GCA_001406815.1_M72	-	M72
Catenibacterium mitsuokai	100886	PRJEB10915	297013	Terrabacteria group	Firmicutes	6.92066	42.1	-	CYZB01	177	6117	5664	10/1/15	10/12/16	Contig	SC	SAMEA3545234	GCA_001405495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/495/GCA_001405495.1_13414_6_9	-	2789STDY5608825
[Eubacterium] siraeum DSM 15702	428128	PRJNA18921	18921	Terrabacteria group	Firmicutes	2.69703	45	-	ABCA03	44	2467	2358	7/13/07	4/7/17	Scaffold	Washington University Genome Sequencing Center	SAMN00627090	GCA_000154325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/325/GCA_000154325.1_ASM15432v1	-	DSM 15702
[Clostridium] spiroforme	29348	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.63236	28.5	-	NFJI01	126	2472	2320	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473692	GCA_002159775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/775/GCA_002159775.1_ASM215977v1	-	An26
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA274686	274686	Proteobacteria	Gammaproteobacteria	4.74433	52.2011	chromosome:NZ_CP011942.1/CP011942.1; plasmid intermediate:NZ_CP011944.1/CP011944.1; plasmid small:NZ_CP011945.1/CP011945.1; plasmid virulence:NZ_CP011943.1/CP011943.1	-	4	4838	4568	5/18/16	3/1/17	Complete Genome	Canadian Food Inspection Agency	SAMN03328998	GCA_001647045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/045/GCA_001647045.1_ASM164704v1	-	OLF-00D989 87-1
Dickeya dadantii NCPPB 898	1223572	PRJNA172906	172906	Proteobacteria	Gammaproteobacteria	4.93764	56.3	chromosome:NZ_CM001976.1/CM001976.1	AOOE01	12	4453	4217	6/4/13	4/8/17	Chromosome	James Hutton Institute	SAMN02470086	GCA_000406145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/145/GCA_000406145.1_DDA898_1.0	24265502	NCPPB 898
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.588	52.2	chromosome:CP023508.1	-	1	4700	4301	9/28/17	9/28/17	Complete Genome	US Food and Drug Administration 	SAMN07312412	GCA_002386165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/165/GCA_002386165.1_ASM238616v1	-	FDAARGOS_368
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.8381	52.2	chromosome:CP023512.1	-	1	4941	4631	9/28/17	9/28/17	Complete Genome	US Food and Drug Administration 	SAMN07312417	GCA_002386325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/325/GCA_002386325.1_ASM238632v1	-	FDAARGOS_373
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.65363	52.2	chromosome 1:NZ_LT904877.1/LT904877.1	-	1	4835	4434	8/4/17	8/17/17	Complete Genome	SC	SAMEA2072936	GCA_001121865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/865/GCA_001121865.2_404Ty	-	SGB92
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB5919	258621	Proteobacteria	Gammaproteobacteria	4.67659	52.2	chromosome 1:NZ_LT905062.1/LT905062.1	-	1	4878	4409	8/4/17	8/17/17	Complete Genome	SC	SAMEA2564027	GCA_900205275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/205/275/GCA_900205275.1_403Ty	-	-
Enterococcus casseliflavus EC30	565652	PRJNA32921	32921	Terrabacteria group	Firmicutes	3.45298	42.6	-	ACAH01	19	3359	3212	5/28/09	3/30/17	Scaffold	Broad Institute	SAMN02595253	GCA_000157215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/215/GCA_000157215.1_ASM15721v1	-	EC30
Brucella ceti M644/93/1	520459	PRJNA33041	33041	Proteobacteria	Alphaproteobacteria	3.33469	57.1	-	ACBO01	17	3353	3114	1/23/09	3/30/17	Scaffold	Broad Institute	SAMN02595283	GCA_000157835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/835/GCA_000157835.1_ASM15783v1	-	M644/93/1
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB5919	258621	Proteobacteria	Gammaproteobacteria	4.61875	52.2	chromosome 1:NZ_LT905143.1/LT905143.1	-	1	4786	4349	8/4/17	8/17/17	Complete Genome	SC	SAMEA2467787	GCA_900205295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/205/295/GCA_900205295.1_E98-3139	-	-
Salmonella enterica	28901	PRJNA354244	354244	Proteobacteria	Gammaproteobacteria	4.79629	52.2	chromosome:NZ_CP022489.1/CP022489.1	-	1	4903	4605	7/27/17	8/1/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN06044996	GCA_002234515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/234/515/GCA_002234515.1_ASM223451v1	-	SA20026234
Vibrio splendidus ATCC 33789	1051645	PRJNA68619	68619	Proteobacteria	Gammaproteobacteria	4.95874	44.1	-	AFWG01	91	4601	4346	8/4/11	5/19/17	Contig	Food and Drug Administration	SAMN02951903	GCA_000222625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/625/GCA_000222625.2_ASM22262v2	21930677	ATCC 33789
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA328055	328055	Proteobacteria	Gammaproteobacteria	4.68625	52.2	chromosome:NZ_CP016754.1/CP016754.1	-	1	4770	4486	7/17/17	7/19/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN05363482	GCA_002220345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/345/GCA_002220345.1_ASM222034v1	-	FORC_052
Salmonella enterica subsp. enterica serovar Ouakam str. SA20034636	1243586	PRJNA177587	177587	Proteobacteria	Gammaproteobacteria	4.87491	52.2	chromosome:NZ_CP022116.1/CP022116.1	-	1	4947	4662	6/30/17	7/3/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN04160801	GCA_002211565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/565/GCA_002211565.1_ASM221156v1	-	SA20034636
Citrobacter braakii	57706	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.83461	52.2	chromosome:NZ_CP022049.1/CP022049.1	-	1	4743	4389	6/27/17	6/29/17	Complete Genome	US Food and Drug Administration 	SAMN06173303	GCA_002208845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/845/GCA_002208845.1_ASM220884v1	-	FDAARGOS_290
Corynebacterium pseudotuberculosis	1719	PRJNA382169	382169	Terrabacteria group	Actinobacteria	2.33776	52.2	chromosome:NZ_CP021251.1/CP021251.1	-	1	2148	2026	5/22/17	5/24/17	Complete Genome	UFMG	SAMN06701041	GCA_002155265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/265/GCA_002155265.1_ASM215526v1	-	ATCC 19410
Corynebacterium pseudotuberculosis	1719	PRJNA379440	379440	Terrabacteria group	Actinobacteria	2.33926	52.2	chromosome:NZ_CP020356.1/CP020356.1	-	1	2146	2021	3/27/17	3/30/17	Complete Genome	UFMG	SAMN06607723	GCA_002072715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/715/GCA_002072715.1_ASM207271v1	22514549	SigmaE
Pectobacterium carotovorum subsp. brasiliense	180957	PRJNA379343	379343	Proteobacteria	Gammaproteobacteria	4.9663	52.2	chromosome:NZ_CP020350.1/CP020350.1	-	1	4455	4252	3/22/17	3/24/17	Complete Genome	Chinese Academy of Agricultural Sciences	SAMN06605957	GCA_002068115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/068/115/GCA_002068115.1_ASM206811v1	-	SX309
Corynebacterium pseudotuberculosis	1719	PRJNA371559	371559	Terrabacteria group	Actinobacteria	2.3393	52.2	chromosome:NZ_CP019768.1/CP019768.1	-	1	2151	2032	3/2/17	3/4/17	Complete Genome	UFMG	SAMN06309613	GCA_002009385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/385/GCA_002009385.1_ASM200938v1	25212181	phoP
Corynebacterium pseudotuberculosis	1719	PRJNA354849	354849	Terrabacteria group	Actinobacteria	2.33715	52.2	chromosome:NZ_CP019769.1/CP019769.1	-	1	2143	2026	3/2/17	3/4/17	Complete Genome	UFMG	SAMN06052515	GCA_002009415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/415/GCA_002009415.1_ASM200941v1	-	MIC6
Helicobacter canadensis MIT 98-5491	537970	PRJNA30071	30071	Proteobacteria	delta/epsilon subdivisions	1.63349	33.8	-	ABQS01	23	1641	1507	8/26/08	4/7/17	Scaffold	Broad Institute	SAMN02463679	GCA_000155455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/455/GCA_000155455.1_ASM15545v1	25212613	MIT 98-5491
Corynebacterium pseudotuberculosis	1719	PRJNA360811	360811	Terrabacteria group	Actinobacteria	2.33809	52.2	chromosome:NZ_CP019587.1/CP019587.1	-	1	2142	1987	2/7/17	4/6/17	Complete Genome	Universidade Federal do Para	SAMN06214720	GCA_001989595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/595/GCA_001989595.1_ASM198959v1	-	PA04
Helicobacter pullorum	35818	PRJNA251882	251882	Proteobacteria	delta/epsilon subdivisions	1.81478	34.1901	plasmid plasmid_B_229254_12:NZ_CM003497.1/CM003497.1	JNOA01	138	1823	1730	9/24/15	4/10/17	Scaffold	"National Institute of Health, Portugal"	SAMN02840986	GCA_001299515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/515/GCA_001299515.1_ASM129951v1	-	229254/12
Corynebacterium pseudotuberculosis	1719	PRJNA348354	348354	Terrabacteria group	Actinobacteria	2.33709	52.2	chromosome:NZ_CP017711.1/CP017711.1	-	1	2145	2021	1/30/17	4/6/17	Complete Genome	UFMG	SAMN05907792	GCA_001975165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/165/GCA_001975165.1_ASM197516v1	-	MEX1
Micrococcus luteus	1270	PRJNA238160	238160	Terrabacteria group	Actinobacteria	2.5013	72.9	chromosome:NZ_CP007437.1/CP007437.1	-	1	2329	2172	2/19/15	4/10/17	Chromosome	Technical University Munich	SAMN02666701	GCA_000877795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/795/GCA_000877795.1_ASM87779v1	25713572	trpE16
Salmonella enterica subsp. enterica serovar Crossness str. 1422-74	1242090	PRJNA177207	177207	Proteobacteria	Gammaproteobacteria	4.84747	52.2	chromosome:NZ_CP019408.1/CP019408.1	-	1	4924	4649	1/30/17	3/2/17	Complete Genome	Laboratory for Foodnorne Zoonoses	SAMN04160812	GCA_001975245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/245/GCA_001975245.1_ASM197524v1	-	1422-74
Salmonella enterica subsp. enterica serovar Apapa str. SA20060561	1242088	PRJNA177205	177205	Proteobacteria	Gammaproteobacteria	4.80166	52.2	chromosome:NZ_CP019403.1/CP019403.1	-	1	4851	4550	1/30/17	3/2/17	Complete Genome	Laboratory for Foodnorne Zoonoses	SAMN04160810	GCA_001975285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/285/GCA_001975285.1_ASM197528v1	-	SA20060561
Yersinia kristensenii	28152	PRJNA243532	243532	Proteobacteria	Gammaproteobacteria	4.44433	47.4	chromosome:NZ_CP008955.1/CP008955.1	-	1	4115	3861	9/9/14	4/2/17	Chromosome	Los Alamos National Laboratory	SAMN02918303	GCA_000750355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/355/GCA_000750355.1_ASM75035v1	25342679	ATCC 33639
Yersinia frederiksenii ATCC 33641	349966	PRJNA243534	243534	Proteobacteria	Gammaproteobacteria	4.94187	47	-	JPPS01	2	4520	4290	9/15/14	4/2/17	Scaffold	Los Alamos National Laboratory	SAMN02940921	GCA_000754805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/805/GCA_000754805.1_YFB	25342679	ATCC 33641
Salmonella enterica subsp. enterica serovar Bardo	932733	PRJNA242810	242810	Proteobacteria	Gammaproteobacteria	4.84914	52.2	chromosome:NZ_CP019404.1/CP019404.1	-	1	4956	4692	1/30/17	3/2/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN04160803	GCA_001975305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/305/GCA_001975305.1_ASM197530v1	-	SA20113257
Salmonella enterica subsp. enterica serovar Hillingdon str. N1529-D3	1242096	PRJNA177215	177215	Proteobacteria	Gammaproteobacteria	4.61806	52.2	chromosome:NZ_CP019410.1/CP019410.1	-	1	4619	4354	1/30/17	3/2/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN04160821	GCA_001975385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/385/GCA_001975385.1_ASM197538v1	-	N1529-D3
Salmonella enterica subsp. enterica serovar Nitra	1129117	PRJNA294451	294451	Proteobacteria	Gammaproteobacteria	4.69181	52.2	chromosome:NZ_CP019416.1/CP019416.1	-	1	4765	4494	1/30/17	3/2/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN04160827	GCA_001975605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/605/GCA_001975605.1_ASM197560v1	-	S-1687
Streptomyces clavuligerus ATCC 27064	443255	PRJNA19249	19249	Terrabacteria group	Actinobacteria	9.14338	72.3901	chromosome:NZ_CM001015.1/CM001015.1; plasmid pSCL1:NZ_CM001016.1/CM001016.1; plasmid pSCL2:NZ_CM001017.1/CM001017.1; plasmid pSCL3:NZ_CM001018.1/CM001018.1; plasmid pSCL4:NZ_CM001019.1/CM001019.1	ADWJ01	5	7774	7491	9/17/10	5/19/17	Chromosome	Korea Research Institute of Bioscience and Biotechnology (KRIBB)	SAMN02470183	GCA_000148465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/465/GCA_000148465.1_Scla_1.0	20889745	ATCC 27064
Salmonella enterica subsp. enterica serovar Wandsworth str. SA20092095	1243595	PRJNA177599	177599	Proteobacteria	Gammaproteobacteria	4.91604	52.2	chromosome:NZ_CP019417.1/CP019417.1	-	1	5013	4748	1/30/17	3/2/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN04160802	GCA_001975625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/625/GCA_001975625.1_ASM197562v1	-	SA20092095
Salmonella enterica subsp. enterica serovar Yovokome str. S-1850	1243600	PRJNA177608	177608	Proteobacteria	Gammaproteobacteria	4.64093	52.2	chromosome:NZ_CP019418.1/CP019418.1	-	1	4664	4421	1/30/17	3/2/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN04160829	GCA_001975645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/645/GCA_001975645.1_ASM197564v1	-	S-1850
Salmonella enterica subsp. enterica serovar Gallinarum str. 9184	685040	PRJNA41263	41263	Proteobacteria	Gammaproteobacteria	4.60991	52.2	chromosome:NZ_CP019035.1/CP019035.1	-	1	4661	4213	1/17/17	3/2/17	Complete Genome	FDA	SAMN00811241	GCA_000335995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/995/GCA_000335995.2_ASM33599v2	23383127	9184
Salmonella enterica subsp. enterica serovar Heidelberg str. SARA35	1029997	PRJNA66675	66675	Proteobacteria	Gammaproteobacteria	4.75121	52.2	chromosome:NZ_CP019176.1/CP019176.1	-	1	4827	4553	1/17/17	3/2/17	Complete Genome	FDA	SAMN01087969	GCA_000486045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/045/GCA_000486045.2_ASM48604v2	24158624	SARA35
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 11511	941189	PRJNA61433	61433	Proteobacteria	Gammaproteobacteria	4.58069	52.2	chromosome:NZ_CP019185.1/CP019185.1	-	1	4667	4310	1/17/17	3/2/17	Complete Genome	FDA	SAMN01823726	GCA_000486725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/725/GCA_000486725.2_ASM48672v2	24158624	ATCC 11511
Salmonella enterica subsp. enterica serovar Minnesota str. ATCC 49284	1124956	PRJNA78459	78459	Proteobacteria	Gammaproteobacteria	4.59239	52.2	chromosome:NZ_CP019184.1/CP019184.1	-	1	4632	4362	1/17/17	3/2/17	Complete Genome	FDA	SAMN01823721	GCA_000486855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/855/GCA_000486855.2_ASM48685v2	24158624	ATCC 49284
Salmonella enterica subsp. enterica serovar Mbandaka str. ATCC 51958	984237	PRJNA62843	62843	Proteobacteria	Gammaproteobacteria	4.90518	52.2	chromosome:NZ_CP019183.1/CP019183.1	-	1	4972	4676	1/17/17	3/2/17	Complete Genome	FDA	SAMN01823720	GCA_000486915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/915/GCA_000486915.2_ASM48691v2	24158624	ATCC 51958
Salmonella enterica subsp. enterica serovar Chester str. ATCC 11997	941190	PRJNA61435	61435	Proteobacteria	Gammaproteobacteria	4.66092	52.2	chromosome:NZ_CP019178.1/CP019178.1	-	1	4730	4444	1/17/17	3/2/17	Complete Genome	FDA	SAMN01823711	GCA_000487255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/255/GCA_000487255.2_ASM48725v2	24158624	ATCC 11997
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.7107	52.2	chromosome:NZ_CP019196.1/CP019196.1	-	1	4748	4488	1/17/17	3/2/17	Complete Genome	Center for Food Safety and Applied Nutrition	SAMN06192066	GCA_001953015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/015/GCA_001953015.1_ASM195301v1	-	CFSAN000738
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA285350	285350	Proteobacteria	Gammaproteobacteria	4.84674	52.2	chromosome:NZ_CP013685.1/CP013685.1	-	1	4941	4687	12/27/16	3/2/17	Complete Genome	university of pennyslvania	SAMN03744300	GCA_001922165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/165/GCA_001922165.1_ASM192216v1	-	0007-33
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA245322	245322	Proteobacteria	Gammaproteobacteria	4.85646	52.2	chromosome:NZ_CP013702.1/CP013702.1	-	1	4962	4688	12/27/16	3/2/17	Complete Genome	USDA ARS	SAMN04125698	GCA_001922185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/185/GCA_001922185.1_ASM192218v1	-	RM10961
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74697	52.2	chromosome:NZ_CP016014.1/CP016014.1	-	1	4763	4487	12/7/16	3/2/17	Complete Genome	Center for Food Safety and Applied Nutrition	SAMN05172401	GCA_001890445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/445/GCA_001890445.1_ASM189044v1	-	CFSAN003387
Salmonella enterica subsp. enterica serovar Newport str. Levine 15	930779	PRJNA60531	60531	Proteobacteria	Gammaproteobacteria	4.88371	52.2	chromosome:NZ_CP015924.1/CP015924.1	-	1	4988	4696	12/6/16	3/2/17	Complete Genome	FDA	SAMN05172398	GCA_000271905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/905/GCA_000271905.2_ASM27190v2	-	Levine 15
Methanobrevibacter smithii DSM 2374	521002	PRJNA29303	29303	Euryarchaeota	Methanobacteria	1.72927	31.3	-	ABYV02	10	1700	1611	10/30/08	3/30/17	Scaffold	WUGSC	SAMN00008834	GCA_000151225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/151/225/GCA_000151225.1_ASM15122v1	-	DSM 2374
Salmonella enterica subsp. enterica serovar Newport str. WA_14882	997339	PRJNA63695	63695	Proteobacteria	Gammaproteobacteria	4.71254	52.2	chromosome:NZ_CP016357.1/CP016357.1	-	1	4768	4521	12/5/16	3/2/17	Complete Genome	FDA	SAMN02415193	GCA_000483715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/715/GCA_000483715.2_ASM48371v2	-	WA_14882
Corynebacterium pseudotuberculosis	1719	PRJNA335634	335634	Terrabacteria group	Actinobacteria	2.33787	52.2	chromosome:NZ_CP016826.1/CP016826.1	-	1	2145	2032	11/3/16	4/5/17	Complete Genome	UFMG	SAMN05449619	GCA_001865765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/765/GCA_001865765.1_ASM186576v1	-	MEX29
Lactobacillus fermentum	1613	PRJNA336464	336464	Terrabacteria group	Firmicutes	1.94987	52.2	chromosome:NZ_CP017151.1/CP017151.1	-	1	1946	1770	9/22/16	4/10/17	Complete Genome	Nestle Research Center	SAMN05510874	GCA_001742205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/205/GCA_001742205.1_ASM174220v1	-	NCC2970
Enterococcus faecalis 13-SD-W-01	1260356	PRJNA179531	179531	Terrabacteria group	Firmicutes	2.93304	38.5	-	ATIO01	95	2863	2732	6/25/13	3/24/17	Scaffold	The Genome Institute	SAMN02436837	GCA_000415185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/185/GCA_000415185.1_ASM41518v1	-	13-SD-W-01
Geobacillus thermoleovorans	33941	PRJNA340206	340206	Terrabacteria group	Firmicutes	3.54433	52.2	chromosome:NZ_CP017071.1/CP017071.1	-	1	3647	3353	9/6/16	4/13/17	Complete Genome	Fujian Academy of Agricultural Sciences	SAMN04631815	GCA_001719205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/205/GCA_001719205.1_ASM171920v1	-	FJAT-2391
Corynebacterium pseudotuberculosis	1719	PRJNA314128	314128	Terrabacteria group	Actinobacteria	2.3372	52.2	chromosome:NZ_CP015100.1/CP015100.1	-	1	2143	2019	7/8/16	4/5/17	Complete Genome	Federal University of Minas Gerais	SAMN04529096	GCA_001682255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/255/GCA_001682255.1_ASM168225v1	-	T1
Corynebacterium pseudotuberculosis	1719	PRJNA315157	315157	Terrabacteria group	Actinobacteria	2.34224	52.2	chromosome:NZ_CP014998.1/CP014998.1	-	1	2149	2020	7/8/16	4/5/17	Complete Genome	Federal University of Minas Gerais	SAMN04550073	GCA_001682275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/275/GCA_001682275.1_ASM168227v1	-	Cp13
Corynebacterium pseudotuberculosis	1719	PRJNA318798	318798	Terrabacteria group	Actinobacteria	2.32843	52.2	chromosome:NZ_CP015309.1/CP015309.1	-	1	2130	2027	6/16/16	4/5/17	Complete Genome	Federal University of Para	SAMN04867886	GCA_001663495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/495/GCA_001663495.1_ASM166349v1	-	PA02
Corynebacterium pseudotuberculosis	1719	PRJNA311038	311038	Terrabacteria group	Actinobacteria	2.33538	52.2	chromosome:NZ_CP014341.1/CP014341.1	-	1	2140	1994	5/27/16	4/5/17	Complete Genome	UFMG	SAMN04458014	GCA_001653295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/295/GCA_001653295.1_ASM165329v1	-	E55
Corynebacterium pseudotuberculosis	1719	PRJNA312392	312392	Terrabacteria group	Actinobacteria	2.33758	52.2	chromosome:NZ_CP014543.1/CP014543.1	-	1	2146	2025	5/27/16	4/5/17	Complete Genome	UFMG	SAMN04497724	GCA_001653315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/315/GCA_001653315.1_ASM165331v1	-	MEX9
Salmonella enterica subsp. enterica serovar Java	224729	PRJEB6403	251923	Proteobacteria	Gammaproteobacteria	4.75678	52.2	chromosome 1:NZ_LT571437.1/LT571437.1	-	1	4861	4583	5/19/16	3/1/17	Complete Genome	SC	SAMEA3468845	GCA_900086565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/565/GCA_900086565.1_39641_H02	-	NCTC5706
Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1677	1454588	PRJNA236659	236659	Proteobacteria	Gammaproteobacteria	4.83639	52.2	chromosome:NZ_CP014663.2/CP014663.2	-	1	4956	4714	4/19/16	3/6/17	Complete Genome	USDA-ARS-USMARC	SAMN02716849	GCA_001623545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/545/GCA_001623545.2_ASM162354v2	27257192	USDA-ARS-USMARC-1677
Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1728	1454589	PRJNA236660	236660	Proteobacteria	Gammaproteobacteria	4.78349	52.2	chromosome:NZ_CP014664.1/CP014664.1	-	1	4862	4627	4/19/16	3/1/17	Complete Genome	USDA-ARS-USMARC	SAMN02716851	GCA_001623585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/585/GCA_001623585.1_ASM162358v1	27257192	USDA-ARS-USMARC-1728
Treponema pallidum subsp. pallidum str. Chicago	666714	PRJNA39981	39981	Spirochaetes	Spirochaetia	1.13928	52.8	chromosome:NC_017268.1/CP001752.1	-	1	1067	1004	3/15/10	3/29/17	Chromosome	University of Washington	SAMN02604256	GCA_000024485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/485/GCA_000024485.1_ASM2448v1	20348263	Chicago
Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1766	1454594	PRJNA236665	236665	Proteobacteria	Gammaproteobacteria	4.75103	52.2	chromosome:NZ_CP014665.1/CP014665.1	-	1	4824	4577	4/19/16	3/1/17	Complete Genome	USDA-ARS-USMARC	SAMN02716856	GCA_001623625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/625/GCA_001623625.1_ASM162362v1	27257192	USDA-ARS-USMARC-1766
Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1781	1454596	PRJNA236667	236667	Proteobacteria	Gammaproteobacteria	4.6357	52.2	chromosome:NZ_CP014666.2/CP014666.2	-	1	4669	4430	4/19/16	3/28/17	Complete Genome	USDA-ARS-USMARC	SAMN02716858	GCA_001623665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/665/GCA_001623665.2_ASM162366v2	27257192	USDA-ARS-USMARC-1781
Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1880	1454634	PRJNA236703	236703	Proteobacteria	Gammaproteobacteria	4.81521	52.2	chromosome:NZ_CP014981.1/CP014981.1	-	1	4885	4655	4/19/16	3/1/17	Complete Genome	USDA-ARS-USMARC	SAMN02716867	GCA_001623705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/705/GCA_001623705.1_ASM162370v1	-	USDA-ARS-USMARC-1880
Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1810	1454647	PRJNA236651	236651	Proteobacteria	Gammaproteobacteria	4.92715	52.2	chromosome:NZ_CP014982.2/CP014982.2	-	1	5045	4766	4/19/16	3/16/17	Complete Genome	USDA-ARS-USMARC	SAMN02716863	GCA_001623745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/745/GCA_001623745.2_ASM162374v2	-	USDA-ARS-USMARC-1810
Salmonella enterica subsp. enterica serovar Typhimurium str. CDC 2009K-2059	1454645	PRJNA236714	236714	Proteobacteria	Gammaproteobacteria	4.82379	52.2	chromosome:NZ_CP014983.1/CP014983.1	-	1	4904	4663	4/19/16	3/1/17	Complete Genome	USDA-ARS-USMARC	SAMN02716878	GCA_001623775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/775/GCA_001623775.1_ASM162377v1	-	CDC 2009K-2059
Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1676	1454587	PRJNA236658	236658	Proteobacteria	Gammaproteobacteria	4.67696	52.2	chromosome:NZ_CP014620.1/CP014620.1	-	1	4724	4486	4/15/16	3/1/17	Complete Genome	USDA-ARS-USMARC	SAMN02716848	GCA_001620225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/225/GCA_001620225.1_ASM162022v1	27257192	USDA-ARS-USMARC-1676
Geobacillus subterraneus	129338	PRJNA310054	310054	Terrabacteria group	Firmicutes	3.47443	52.2	chromosome:NZ_CP014342.1/CP014342.1	-	1	3467	3182	4/12/16	4/12/17	Complete Genome	Kyungpook National University	SAMN04445793	GCA_001618685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/685/GCA_001618685.1_ASM161868v1	-	KCTC 3922
Vibrio fischeri MJ11	388396	PRJNA19393	19393	Proteobacteria	Gammaproteobacteria	4.50334	38.201	chromosome I:NC_011184.1/CP001139.1; chromosome II:NC_011186.1/CP001133.1; plasmid pMJ100:NC_011185.1/CP001134.1	-	3	4166	3948	8/28/08	5/19/17	Chromosome	Moore Foundation	SAMN02603627	GCA_000020845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/845/GCA_000020845.1_ASM2084v1	19182778	MJ11
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJEB10340	299069	Proteobacteria	Gammaproteobacteria	5.03724	52.2	chromosome I:NZ_LN999997.1/LN999997.1	-	1	5200	4950	1/22/16	3/1/17	Complete Genome	INSTITUTE OF FOOD RESEARCH	SAMEA3506109	GCA_001540845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/845/GCA_001540845.1_SO4698_09	-	-
Ureaplasma urealyticum serovar 8 str. ATCC 27618	626095	PRJNA19089	19089	Terrabacteria group	Tenericutes	0.881828	25.8	-	AAYN02	2	704	653	3/21/07	3/30/17	Contig	TIGR	SAMN02435844	GCA_000169535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/535/GCA_000169535.1_ASM16953v1	-	ATCC 27618
Corynebacterium pseudotuberculosis	1719	PRJNA294672	294672	Terrabacteria group	Actinobacteria	2.33753	52.2	chromosome:NZ_CP013697.1/CP013697.1	-	1	2143	2016	12/23/15	4/4/17	Complete Genome	Federal University of Minas Gerais	SAMN04028217	GCA_001481675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/675/GCA_001481675.1_ASM148167v1	-	MEX25
Corynebacterium pseudotuberculosis	1719	PRJNA292562	292562	Terrabacteria group	Actinobacteria	2.33751	52.2	chromosome:NZ_CP013698.1/CP013698.1	-	1	2145	2026	12/23/15	4/4/17	Complete Genome	Federal University of Minas Gerais	SAMN03981486	GCA_001481715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/715/GCA_001481715.1_ASM148171v1	-	PO222/4-1
Corynebacterium pseudotuberculosis	1719	PRJNA294677	294677	Terrabacteria group	Actinobacteria	2.33577	52.2	chromosome:NZ_CP013699.1/CP013699.1	-	1	2141	1994	12/23/15	4/4/17	Complete Genome	Federal University of Minas Gerais	SAMN04028218	GCA_001481755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/755/GCA_001481755.1_ASM148175v1	-	E56
Corynebacterium pseudotuberculosis	1719	PRJNA302777	302777	Terrabacteria group	Actinobacteria	2.33792	52.2	chromosome:NZ_CP013327.1/CP013327.1	-	1	2141	2032	12/3/15	4/4/17	Complete Genome	Universidade Federal do Para	SAMN04276898	GCA_001456175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/175/GCA_001456175.1_ASM145617v1	26823595	PA01
Corynebacterium pseudotuberculosis	1719	PRJNA301685	301685	Terrabacteria group	Actinobacteria	2.33785	52.2	chromosome:NZ_CP013146.1/CP013146.1	-	1	2142	2018	11/23/15	4/4/17	Complete Genome	  Federal Universityof Minas Gerais	SAMN04254308	GCA_001447295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/447/295/GCA_001447295.1_ASM144729v1	26823597	N1
Methylobacterium radiotolerans	31998	PRJNA278124	278124	Proteobacteria	Alphaproteobacteria	6.2984	71.3	-	LACA01	226	5939	5678	2/1/17	4/17/17	Contig	CSIR-Institute of Microbial Technology	SAMN03406712	GCA_001981325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/325/GCA_001981325.1_ASM198132v1	-	RE1.2
Corynebacterium pseudotuberculosis	1719	PRJNA295559	295559	Terrabacteria group	Actinobacteria	2.33511	52.2	chromosome:NZ_CP012837.1/CP012837.1	-	1	2141	2019	11/5/15	4/4/17	Complete Genome	  Federal Universityof Minas Gerais	SAMN04075758	GCA_001433475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/475/GCA_001433475.1_ASM143347v1	27129708	1002B
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA292003	292003	Proteobacteria	Gammaproteobacteria	4.70871	52.2	chromosome:NZ_CP012513.1/CP012513.1	-	1	4740	4511	10/2/15	2/28/17	Complete Genome	USDA ARS	SAMN03959817	GCA_001305815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/305/815/GCA_001305815.1_ASM130581v1	26586897	RM1984
Thermoanaerobacter ethanolicus JW 200	509192	PRJNA51151	51151	Terrabacteria group	Firmicutes	3.09165	34.1	-	AEYS01	376	2948	2600	3/14/11	8/13/15	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713592	GCA_000192295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/295/GCA_000192295.2_ASM19229v1	-	JW 200
Saccharopolyspora erythraea NRRL 2338	405948	PRJNA17885	17885	Terrabacteria group	Actinobacteria	8.07908	71.2	-	ABFV01	241	7197	6784	9/4/09	5/19/17	Contig	Istituto Tecnologie Biomediche -National Research Council	SAMN02470651	GCA_000171635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/635/GCA_000171635.1_ASM17163v1	-	NRRL 2338
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA292007	292007	Proteobacteria	Gammaproteobacteria	4.70136	52.2	chromosome:NZ_CP012514.1/CP012514.1	-	1	4737	4512	10/2/15	2/28/17	Complete Genome	USDA ARS	SAMN03959818	GCA_001305835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/305/835/GCA_001305835.1_ASM130583v1	26586897	RM1986
Corynebacterium pseudotuberculosis	1719	PRJNA292562	292562	Terrabacteria group	Actinobacteria	2.33712	52.2	chromosome:NZ_CP012695.1/CP012695.1	-	1	2145	2017	9/24/15	4/4/17	Complete Genome	Federal University of Minas Gerais	SAMN04038596	GCA_001298505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/505/GCA_001298505.1_ASM129850v1	-	PO269-5
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA285350	285350	Proteobacteria	Gammaproteobacteria	4.53892	52.2	chromosome:CP012597.1	-	1	4361	3722	9/2/15	9/3/16	Complete Genome	university of pennyslvania	SAMN03744301	GCA_001278275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/275/GCA_001278275.1_ASM127827v1	-	0112-791
Faecalibacterium prausnitzii M21/2	411485	PRJNA18203	18203	Terrabacteria group	Firmicutes	3.12738	56.2	-	ABED02	25	3037	2868	7/20/07	3/30/17	Scaffold	Washington University Genome Sequencing Center	SAMN02299416	GCA_000154385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/385/GCA_000154385.1_ASM15438v1	-	M21/2
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA285350	285350	Proteobacteria	Gammaproteobacteria	4.96215	52.2	chromosome:CP012598.1	-	1	4818	4465	9/2/15	9/3/16	Complete Genome	university of pennyslvania	SAMN03744302	GCA_001278295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/295/GCA_001278295.1_ASM127829v1	-	0211-109
Salmonella enterica subsp. enterica serovar Sloterdijk str. ATCC 15791	938141	PRJNA61353	61353	Proteobacteria	Gammaproteobacteria	4.81779	52.2	chromosome:NZ_CP012349.1/CP012349.1	-	1	4846	4547	8/12/15	2/28/17	Complete Genome	FDA	SAMN01805326	GCA_000486445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/445/GCA_000486445.2_ASM48644v2	26988049	ATCC 15791
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA280705	280705	Proteobacteria	Gammaproteobacteria	4.67837	52.2	chromosome:NZ_CP011790.1/CP011790.1	-	1	4752	4419	7/22/15	2/27/17	Complete Genome	Pennsylvania State University	SAMN03465493	GCA_001185215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/215/GCA_001185215.1_ASM118521v1	26358589	SEE1
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA280707	280707	Proteobacteria	Gammaproteobacteria	4.67783	52.2	chromosome:NZ_CP011791.1/CP011791.1	-	1	4750	4378	7/22/15	2/27/17	Complete Genome	Pennsylvania State University	SAMN03468068	GCA_001185245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/245/GCA_001185245.1_ASM118524v1	26358589	SEE2
Corynebacterium pseudotuberculosis	1719	PRJNA273364	273364	Terrabacteria group	Actinobacteria	2.33865	52.2	chromosome:NZ_CP010795.1/CP010795.1	-	1	2147	2026	6/3/15	4/3/17	Complete Genome	Federal University of Minas Gerais	SAMN03290960	GCA_001026945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/945/GCA_001026945.1_ASM102694v1	-	29156
Corynebacterium pseudotuberculosis	1719	PRJNA282769	282769	Terrabacteria group	Actinobacteria	2.33745	52.2	chromosome:NZ_CP011474.1/CP011474.1	-	1	2143	2012	6/2/15	4/3/17	Complete Genome	  Federal Universityof Minas Gerais	SAMN03577816	GCA_001017615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/615/GCA_001017615.1_ASM101761v1	26184935	12C
Salmonella enterica subsp. enterica serovar Typhimurium str. CDC 2011K-0870	1454642	PRJNA236711	236711	Proteobacteria	Gammaproteobacteria	4.76947	52.2	chromosome:NZ_CP007523.1/CP007523.1	-	1	4829	4602	4/20/15	2/27/17	Complete Genome	USDA-ARS-USMARC	SAMN02712200	GCA_000973645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/645/GCA_000973645.1_ASM97364v1	-	CDC 2011K-0870
Corynebacterium pseudotuberculosis	1719	PRJNA259231	259231	Terrabacteria group	Actinobacteria	2.33782	52.2	chromosome:NZ_CP010889.1/CP010889.1	-	1	2143	1961	4/16/15	4/3/17	Complete Genome	Rede Paraense de genômica e proteômica	SAMN03002797	GCA_000972805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/805/GCA_000972805.1_ASM97280v1	-	226
Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1175	1454590	PRJNA236661	236661	Proteobacteria	Gammaproteobacteria	4.7316	52.2	chromosome:NZ_CP007483.2/CP007483.2	-	1	4789	4549	3/26/15	3/11/17	Complete Genome	USDA-ARS-USMARC	SAMN02712199	GCA_000963535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/535/GCA_000963535.2_ASM96353v2	-	USDA-ARS-USMARC-1175
Delftia acidovorans CCUG 274B	883101	PRJNA52167	52167	Proteobacteria	Betaproteobacteria	6.95318	66.6	-	AGYX01	79	6419	6196	6/13/13	4/1/17	Scaffold	Broad Institute	SAMN02596773	GCA_000411195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/195/GCA_000411195.1_Delf_acid_CCUG_274B_V1	-	CCUG 274B
Salinispora arenicola CNT849	1137264	PRJNA169783	169783	Terrabacteria group	Actinobacteria	5.72044	69.5	-	AREQ01	51	5218	4906	4/19/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02441023	GCA_000373825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/825/GCA_000373825.1_ASM37382v1	-	CNT849
Salmonella enterica subsp. enterica serovar Newport str. CVM 21550	796733	PRJNA49631	49631	Proteobacteria	Gammaproteobacteria	4.85818	52.2	chromosome:NZ_CP010283.1/CP010283.1	-	1	4967	4727	3/12/15	2/27/17	Complete Genome	FDA	SAMN01765627	GCA_000272715.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/715/GCA_000272715.3_ASM27271v3	-	CVM 21550
Salmonella enterica subsp. enterica serovar Newport str. CVM 22513	796732	PRJNA49635	49635	Proteobacteria	Gammaproteobacteria	4.83077	52.2	chromosome:NZ_CP010281.1/CP010281.1	-	1	4931	4653	3/12/15	2/27/17	Complete Genome	FDA	SAMN01805325	GCA_000272735.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/735/GCA_000272735.3_ASM27273v3	-	CVM 22513
Salmonella enterica subsp. enterica serovar Newport str. CVM 21538	796731	PRJNA49637	49637	Proteobacteria	Gammaproteobacteria	4.79584	52.2	chromosome:NZ_CP010282.1/CP010282.1	-	1	4887	4556	3/12/15	2/27/17	Complete Genome	FDA	SAMN01765628	GCA_000272755.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/755/GCA_000272755.3_ASM27275v3	-	CVM 21538
Salmonella enterica subsp. enterica serovar Newport str. CVM 22425	796730	PRJNA49639	49639	Proteobacteria	Gammaproteobacteria	4.83294	52.2	chromosome:NZ_CP010279.1/CP010279.1	-	1	4954	4672	3/12/15	2/27/17	Complete Genome	FDA	SAMN01813481	GCA_000272775.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/775/GCA_000272775.3_ASM27277v3	-	CVM 22425
Roseobacter denitrificans OCh 114	375451	PRJEB17293	351457	Proteobacteria	Alphaproteobacteria	4.31761	58.9	-	FOOO01	39	4078	3986	10/31/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443635	GCA_900113215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/215/GCA_900113215.1_IMG-taxon_2693429868_annotated_assembly	-	DSM 7001
Thermotoga neapolitana LA10	1288483	PRJNA188152	188152	Thermotogae	Thermotogae	1.87809	46.9	-	ASGQ01	25	1945	1658	9/9/14	4/9/17	Contig	University of Alberta	SAMN03019722	GCA_000750655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/655/GCA_000750655.1_TnapLA10N1	-	LA10
Salmonella enterica subsp. enterica serovar Anatum str. CDC 06-0532	1454592	PRJNA236663	236663	Proteobacteria	Gammaproteobacteria	4.66771	52.2	chromosome:NZ_CP007211.2/CP007211.2	-	1	4719	4476	3/4/15	3/6/17	Complete Genome	USDA-ARS-USMARC	SAMN02712195	GCA_000940895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/895/GCA_000940895.2_ASM94089v2	27257192	CDC 06-0532
Salinispora tropica CNR699	1169198	PRJNA175190	175190	Terrabacteria group	Actinobacteria	5.6088	69.2	-	ARHP01	124	5236	4884	4/22/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441011	GCA_000377065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/065/GCA_000377065.1_ASM37706v1	-	CNR699
Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1927	1454620	PRJNA236689	236689	Proteobacteria	Gammaproteobacteria	4.69559	52.2	chromosome:NZ_CP007216.1/CP007216.1	-	1	4738	4436	3/4/15	2/27/17	Complete Genome	USDA-ARS-USMARC	SAMN02712196	GCA_000940935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/935/GCA_000940935.1_ASM94093v1	-	USDA-ARS-USMARC-1927
Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1899	1454639	PRJNA236708	236708	Proteobacteria	Gammaproteobacteria	4.85644	52.2	chromosome:NZ_CP007235.2/CP007235.2	-	1	4946	4699	3/4/15	3/6/17	Complete Genome	USDA-ARS-USMARC	SAMN02712198	GCA_000941015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/015/GCA_000941015.2_ASM94101v2	-	USDA-ARS-USMARC-1899
Oenococcus oeni	1247	PRJNA288925	288925	Terrabacteria group	Firmicutes	1.76883	37.9	-	LOBV01	13	1814	1638	4/11/16	3/28/17	Scaffold	university of milan	SAMN03839971	GCA_001618285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/285/GCA_001618285.1_ooeni_v2	-	DSPZS12
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJNA255737	255737	Proteobacteria	Gammaproteobacteria	4.59902	52.2	chromosome:NZ_CP009049.1/CP009049.1	-	1	4716	4288	1/14/15	2/27/17	Complete Genome	Beijing Institute of Biotechnology	SAMN02909989	GCA_000818075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/075/GCA_000818075.1_ASM81807v1	-	CMCC 50973
Campylobacter fetus subsp. fetus	32019	PRJEB12566	312809	Proteobacteria	delta/epsilon subdivisions	2.04109	33.7	-	FIZO01	24	1912	1837	2/20/16	4/10/17	Scaffold	WTSI	SAMEA3293000	GCA_900065885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/885/GCA_900065885.1_16473_4_70	-	RC11
Corynebacterium pseudotuberculosis	1719	PRJNA267107	267107	Terrabacteria group	Actinobacteria	2.33718	52.2	chromosome:NZ_CP009927.1/CP009927.1	-	1	2141	2015	1/6/15	4/2/17	Complete Genome	Federal University of Minas Gerais	SAMN03177795	GCA_000814865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/865/GCA_000814865.1_ASM81486v1	27066196	VD57
Bartonella bacilliformis Ver097	1293911	PRJNA189520	189520	Proteobacteria	Alphaproteobacteria	1.39471	37.6	-	ASIV01	6	1212	1108	6/17/14	4/3/17	Scaffold	Broad Institute	SAMN01921144	GCA_000709795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/795/GCA_000709795.1_Bart_baci_Ver097_V1	-	Ver097
Salmonella enterica subsp. enterica serovar Newport str. CVM N18486	858306	PRJNA49973	49973	Proteobacteria	Gammaproteobacteria	4.75584	52.2	chromosome:NZ_CP009561.1/CP009561.1	-	1	4821	4585	10/14/14	2/27/17	Complete Genome	FDA	SAMN01816117	GCA_000272815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/815/GCA_000272815.2_ASM27281v2	25720681	CVM N18486
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA256209	256209	Proteobacteria	Gammaproteobacteria	4.71094	52.2	chromosome:NZ_CP009089.1/CP009089.1	-	1	4798	4512	9/9/14	2/26/17	Complete Genome	Canadian Food Inspection Agency	SAMN02941163	GCA_000750215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/215/GCA_000750215.1_ASM75021v1	25156331	OLF-SE7-100819
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA256209	256209	Proteobacteria	Gammaproteobacteria	4.66728	52.2	chromosome:NZ_CP009090.1/CP009090.1	-	1	4747	4471	9/9/14	2/26/17	Complete Genome	Canadian Food Inspection Agency	SAMN02941164	GCA_000750255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/255/GCA_000750255.1_ASM75025v1	-	OLF-SE8-1021710
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA256209	256209	Proteobacteria	Gammaproteobacteria	4.70989	52.2	chromosome:NZ_CP009092.1/CP009092.1	-	1	4796	4520	9/9/14	2/27/17	Complete Genome	Canadian Food Inspection Agency	SAMN02941166	GCA_000750335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/335/GCA_000750335.1_ASM75033v1	25156331	OLF-SE10-10052
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA256209	256209	Proteobacteria	Gammaproteobacteria	4.70274	52.2	chromosome:NZ_CP009093.1/CP009093.1	-	1	4790	4501	9/9/14	2/27/17	Complete Genome	Canadian Food Inspection Agency	SAMN02941167	GCA_000750375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/375/GCA_000750375.1_ASM75037v1	-	OLF-SE11-10058
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA256209	256209	Proteobacteria	Gammaproteobacteria	4.67913	52.2	chromosome:NZ_CP009085.2/CP009085.2	-	1	4750	4485	9/9/14	2/27/17	Complete Genome	Canadian Food Inspection Agency	SAMN02937349	GCA_000750395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/395/GCA_000750395.2_ASM75039v2	-	OLF-SE3-98983-4
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA256209	256209	Proteobacteria	Gammaproteobacteria	4.67913	52.2	chromosome:NZ_CP009084.2/CP009084.2	-	1	4751	4488	9/9/14	2/27/17	Complete Genome	Canadian Food Inspection Agency	SAMN02937348	GCA_000750415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/415/GCA_000750415.2_ASM75041v2	-	OLF-SE2-98984-6
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA256209	256209	Proteobacteria	Gammaproteobacteria	4.67838	52.2	chromosome:NZ_CP009086.1/CP009086.1	-	1	4752	4487	9/9/14	2/26/17	Complete Genome	Canadian Food Inspection Agency	SAMN02937350	GCA_000750435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/435/GCA_000750435.1_ASM75043v1	25156331	OLF-SE4-0317-8
Rhodobacter sphaeroides 2.4.1	272943	PRJNA56	56	Proteobacteria	Alphaproteobacteria	4.60298	68.7841	chromosome 1:NC_007493.2/CP000143.2; chromosome 2:NC_007494.2/CP000144.2; plasmid A:NC_009007.1/DQ232586.1; plasmid B:NC_007488.2/CP000145.2; plasmid C:NC_007489.1/CP000146.1; plasmid D:NC_007490.2/CP000147.2; plasmid E:NC_009008.1/DQ232587.1	-	7	4474	4280	10/7/05	8/28/16	Chromosome	DOE Joint Genome Institute	SAMN02598537	GCA_000012905.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/905/GCA_000012905.2_ASM1290v2	-	-
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA256209	256209	Proteobacteria	Gammaproteobacteria	4.67857	52.2	chromosome:NZ_CP009087.1/CP009087.1	-	1	4751	4486	9/9/14	2/26/17	Complete Genome	Canadian Food Inspection Agency	SAMN02937351	GCA_000750455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/455/GCA_000750455.1_ASM75045v1	25156331	OLF-SE5-1104-2
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA256209	256209	Proteobacteria	Gammaproteobacteria	4.67891	52.2	chromosome:NZ_CP009083.1/CP009083.1	-	1	4754	4492	9/9/14	2/26/17	Complete Genome	Canadian Food Inspection Agency	SAMN02937347	GCA_000750475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/475/GCA_000750475.1_ASM75047v1	25156331	OLF-SE1-1019-1
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA256209	256209	Proteobacteria	Gammaproteobacteria	4.67762	52.2	chromosome:NZ_CP009088.1/CP009088.1	-	1	4768	4451	9/9/14	2/26/17	Complete Genome	Canadian Food Inspection Agency	SAMN02937352	GCA_000750495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/495/GCA_000750495.1_ASM75049v1	25156331	OLF-SE6-00219-16
Salmonella enterica subsp. enterica serovar Choleraesuis	119912	PRJNA245852	245852	Proteobacteria	Gammaproteobacteria	4.75159	52.2	chromosome:NZ_CP007639.1/CP007639.1	-	1	4860	4475	8/21/14	2/26/17	Complete Genome	Yangzhou University	SAMN02741042	GCA_000742815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/815/GCA_000742815.1_ASM74281v1	25301657	C500
Corynebacterium pseudotuberculosis	1719	PRJNA254108	254108	Terrabacteria group	Actinobacteria	2.33814	52.2	chromosome:NZ_CP008922.1/CP008922.1	-	1	2145	2011	7/17/14	4/2/17	Complete Genome	"Oslo University Hospital, Rikshopitalet"	SAMN02899720	GCA_000730365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/365/GCA_000730365.1_ASM73036v1	25189581	48252
Candidatus Pelagibacter ubique HTCC1002	314261	PRJNA13577	13577	Proteobacteria	Alphaproteobacteria	1.32862	29.8	-	AAPV01	4	1404	1345	4/10/06	3/30/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436088	GCA_000153525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/525/GCA_000153525.1_ASM15352v1	-	HTCC1002
Nitrosococcus oceani AFC27	473788	PRJNA13547	13547	Proteobacteria	Gammaproteobacteria	3.48006	50.3	-	ABSG01	12	3307	3092	7/15/08	4/7/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436179	GCA_000155655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/655/GCA_000155655.1_ASM15565v1	-	AFC27
Corynebacterium pseudotuberculosis	1719	PRJNA254109	254109	Terrabacteria group	Actinobacteria	2.33814	52.2	chromosome:NZ_CP008923.1/CP008923.1	-	1	2146	2012	7/17/14	4/2/17	Complete Genome	"Oslo University Hospital, Rikshopitalet"	SAMN02899788	GCA_000730405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/405/GCA_000730405.1_ASM73040v1	25189581	CS_10
Corynebacterium pseudotuberculosis	1719	PRJNA254110	254110	Terrabacteria group	Actinobacteria	2.3383	52.2	chromosome:NZ_CP008924.1/CP008924.1	-	1	2145	2020	7/17/14	4/2/17	Complete Genome	"Oslo University Hospital, Rikshopitalet"	SAMN02899789	GCA_000730445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/445/GCA_000730445.1_ASM73044v1	25189581	Ft_2193/67
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20100325	1412600	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007360.2/CP007360.2	-	1	4762	4496	4/11/14	3/1/17	Complete Genome	LFZ	SAMN02384321	GCA_000626695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/695/GCA_000626695.2_ASM62669v2	24786953	EC20100325
Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20	859199	PRJNA50023	50023	Proteobacteria	Gammaproteobacteria	4.69437	52.2	chromosome:NZ_CP007530.1/CP007530.1	-	1	4738	4481	4/4/14	2/26/17	Complete Genome	FDA	SAMN00710608	GCA_000188955.5	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/955/GCA_000188955.5_ASM18895v5	21345093	507440-20
Salmonella enterica subsp. enterica serovar Anatum str. ATCC BAA-1592	984211	PRJNA62791	62791	Proteobacteria	Gammaproteobacteria	4.7061	52.2	chromosome:NZ_CP007531.1/CP007531.1	-	1	4754	4510	4/4/14	2/26/17	Complete Genome	FDA	SAMN01813417	GCA_000487575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/575/GCA_000487575.2_ASM48757v2	24158624	ATCC BAA-1592
Salmonella enterica subsp. enterica serovar Abony str. 0014	1029983	PRJNA66687	66687	Proteobacteria	Gammaproteobacteria	4.73745	52.2	chromosome:NZ_CP007534.1/CP007534.1	-	1	4800	4541	4/4/14	2/26/17	Complete Genome	FDA	SAMN01823751	GCA_000487615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/615/GCA_000487615.2_ASM48761v2	24158624	14
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110354	1243619	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.71116	52.2	chromosome:NZ_CP007175.1/CP007175.1	-	1	4790	4527	4/2/14	2/26/17	Complete Genome	LFZ	SAMN02384160	GCA_000626175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/175/GCA_000626175.1_ASM62617v1	24762938	EC20110354
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120008	1412470	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.71192	52.2	chromosome:NZ_CP007245.1/CP007245.1	-	1	4795	4501	4/2/14	2/26/17	Complete Genome	LFZ	SAMN02384191	GCA_000626195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/195/GCA_000626195.1_ASM62619v1	24762938	EC20120008
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20100101	1412457	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.65416	52.2	chromosome:NZ_CP007246.1/CP007246.1	-	1	4728	4463	4/2/14	2/26/17	Complete Genome	LFZ	SAMN02384178	GCA_000626215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/215/GCA_000626215.1_ASM62621v1	24762938	EC20100101
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110221	1412455	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.70903	52.2	chromosome:NZ_CP007247.1/CP007247.1	-	1	4787	4526	4/2/14	2/26/17	Complete Genome	LFZ	SAMN02384174	GCA_000626235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/235/GCA_000626235.1_ASM62623v1	24762938	EC20110221
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20090698	1412454	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.681	52.2	chromosome:NZ_CP007248.1/CP007248.1	-	1	4745	4491	4/2/14	2/26/17	Complete Genome	LFZ	SAMN02384173	GCA_000626255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/255/GCA_000626255.1_ASM62625v1	24762938	EC20090698
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20090641	1412453	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.71231	52.2	chromosome:NZ_CP007249.2/CP007249.2	-	1	4800	4532	4/2/14	2/27/17	Complete Genome	LFZ	SAMN02384172	GCA_000626275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/275/GCA_000626275.2_ASM62627v2	26404595	EC20090641
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110355	1243620	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68184	52.2	chromosome:NZ_CP007250.1/CP007250.1	-	1	4756	4493	4/2/14	2/26/17	Complete Genome	LFZ	SAMN02384171	GCA_000626295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/295/GCA_000626295.1_ASM62629v1	24762938	EC20110355
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20111175	1244121	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.67981	52.2	chromosome:NZ_CP007252.1/CP007252.1	-	1	4755	4487	4/2/14	2/26/17	Complete Genome	LFZ	SAMN02384176	GCA_000626335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/335/GCA_000626335.1_ASM62633v1	24762938	EC20111175
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20111174	1244122	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.6838	52.2	chromosome:NZ_CP007253.1/CP007253.1	-	1	4758	4485	4/2/14	2/26/17	Complete Genome	LFZ	SAMN02384177	GCA_000626355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/355/GCA_000626355.1_ASM62635v1	24762938	EC20111174
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20111095	1244120	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.67995	52.2	chromosome:NZ_CP007254.1/CP007254.1	-	1	4756	4488	4/2/14	2/26/17	Complete Genome	LFZ	SAMN02384168	GCA_000626375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/375/GCA_000626375.1_ASM62637v1	24762938	EC20111095
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121175	1412592	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.67995	52.2	chromosome:NZ_CP007269.1/CP007269.2	-	1	4756	4488	4/1/14	2/26/17	Complete Genome	LFZ	SAMN02384313	GCA_000623055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/055/GCA_000623055.2_ASM62305v2	24786953	EC20121175
Shigella dysenteriae CDC 74-1112	941429	PRJEA60771	60771	Proteobacteria	Gammaproteobacteria	4.59614	51.1	-	AERM01	242	5152	4174	1/27/11	8/4/17	Contig	Virginia Bioinformatics Institute	SAMN02472086	GCA_000193895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/895/GCA_000193895.2_ASM19389v2	-	CDC 74-1112
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121178	1412595	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007271.1/CP007271.2	-	1	4763	4501	4/1/14	3/1/17	Complete Genome	LFZ	SAMN02384316	GCA_000623095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/095/GCA_000623095.2_ASM62309v2	24786953	EC20121178
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121179	1412596	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007272.2/CP007272.2	-	1	4761	4500	4/1/14	3/1/17	Complete Genome	LFZ	SAMN02384317	GCA_000623115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/115/GCA_000623115.2_ASM62311v2	24786953	EC20121179
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121180	1412597	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007273.1/CP007273.2	-	1	4761	4499	4/1/14	3/1/17	Complete Genome	LFZ	SAMN02384318	GCA_000623135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/135/GCA_000623135.2_ASM62313v2	24786953	EC20121180
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120005	1412468	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.67929	52.2	chromosome:NZ_CP007267.2/CP007267.2	-	1	4756	4491	4/1/14	2/27/17	Complete Genome	LFZ	SAMN02384189	GCA_000623195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/195/GCA_000623195.2_ASM62319v2	26404595	EC20120005
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110361	1244119	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68291	52.2	chromosome:NZ_CP007263.1/CP007263.1	-	1	4753	4481	4/1/14	2/26/17	Complete Genome	LFZ	SAMN02384167	GCA_000623275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/275/GCA_000623275.1_ASM62327v1	24762938	EC20110361
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110360	1244118	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.67862	52.2	chromosome:NZ_CP007258.1/CP007258.1	-	1	4750	4483	4/1/14	2/26/17	Complete Genome	LFZ	SAMN02384166	GCA_000623295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/295/GCA_000623295.1_ASM62329v1	24762938	EC20110360
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110359	1244113	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.71147	52.2	chromosome:NZ_CP007259.1/CP007259.1	-	1	4791	4526	4/1/14	2/26/17	Complete Genome	LFZ	SAMN02384164	GCA_000623315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/315/GCA_000623315.1_ASM62331v1	24762938	EC20110359
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110358	1244112	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.67869	52.2	chromosome:NZ_CP007260.1/CP007260.1	-	1	4745	4487	4/1/14	2/26/17	Complete Genome	LFZ	SAMN02384163	GCA_000623335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/335/GCA_000623335.1_ASM62333v1	24762938	EC20110358
Xanthomonas axonopodis pv. bauhiniae	487824	PRJNA298611	298611	Proteobacteria	Gammaproteobacteria	5.19113	64.6	-	LOKR01	192	4746	4243	3/6/17	3/9/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN04145204	GCA_002019095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/095/GCA_002019095.1_ASM201909v1	-	LMG548
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110357	1244111	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.67842	52.2	chromosome:NZ_CP007261.1/CP007261.1	-	1	4748	4488	4/1/14	2/26/17	Complete Genome	LFZ	SAMN02384162	GCA_000623355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/355/GCA_000623355.1_ASM62335v1	24762938	EC20110357
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110356	1243621	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68281	52.2	chromosome:NZ_CP007262.1/CP007262.1	-	1	4758	4496	4/1/14	2/26/17	Complete Genome	LFZ	SAMN02384161	GCA_000623375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/375/GCA_000623375.1_ASM62337v1	24762938	EC20110356
Salmonella enterica subsp. enterica serovar Enteritidis str. SA19981857	1412486	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007288.2/CP007288.2	-	1	4762	4499	4/1/14	3/1/17	Complete Genome	LFZ	SAMN02384207	GCA_000623395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/395/GCA_000623395.2_ASM62339v2	24786953	SA19981857
Salmonella enterica subsp. enterica serovar Enteritidis str. SA19992322	1412452	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007291.2/CP007291.2	-	1	4762	4498	4/1/14	3/1/17	Complete Genome	LFZ	SAMN02384169	GCA_000623455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/455/GCA_000623455.2_ASM62345v2	24786953	SA19992322
Salmonella enterica subsp. enterica serovar Enteritidis str. SA19994216	1412499	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007292.1/CP007292.2	-	1	4764	4503	4/1/14	3/1/17	Complete Genome	LFZ	SAMN02384220	GCA_000623475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/475/GCA_000623475.2_ASM62347v2	24786953	SA19994216
Salmonella enterica subsp. enterica serovar Enteritidis str. SA19960848	1412487	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007280.2/CP007280.2	-	1	4762	4498	4/1/14	3/1/17	Complete Genome	LFZ	SAMN02384208	GCA_000623615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/615/GCA_000623615.2_ASM62361v2	24786953	SA19960848
Salmonella enterica subsp. enterica serovar Enteritidis str. SA19970510	1412473	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007282.2/CP007282.2	-	1	4765	4501	4/1/14	3/1/17	Complete Genome	LFZ	SAMN02384194	GCA_000623655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/655/GCA_000623655.2_ASM62365v2	24786953	SA19970510
Salmonella enterica subsp. enterica serovar Enteritidis str. SA19970769	1412474	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007283.2/CP007283.2	-	1	4763	4500	4/1/14	3/1/17	Complete Genome	LFZ	SAMN02384195	GCA_000623675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/675/GCA_000623675.2_ASM62367v2	24786953	SA19970769
Salmonella enterica subsp. enterica serovar Enteritidis str. SA19980677	1412472	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007285.2/CP007285.2	-	1	4764	4497	4/1/14	3/1/17	Complete Genome	LFZ	SAMN02384193	GCA_000623715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/715/GCA_000623715.2_ASM62371v2	24786953	SA19980677
Salmonella enterica subsp. enterica serovar Enteritidis str. SA19981522	1412485	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007286.2/CP007286.2	-	1	4765	4501	4/1/14	3/1/17	Complete Genome	LFZ	SAMN02384206	GCA_000623735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/735/GCA_000623735.2_ASM62373v2	24786953	SA19981522
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20094352	1412491	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007312.2/CP007312.2	-	1	4762	4499	4/1/14	3/1/17	Complete Genome	LFZ	SAMN02384212	GCA_000624055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/055/GCA_000624055.2_ASM62405v2	24786953	SA20094352
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121177	1412594	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007333.1/CP007333.2	-	1	4763	4499	4/1/14	3/2/17	Complete Genome	LFZ	SAMN02384315	GCA_000624175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/175/GCA_000624175.2_ASM62417v2	24786953	EC20121177
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120002	1412466	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.67942	52.2	chromosome:NZ_CP007329.2/CP007329.2	-	1	4756	4492	4/1/14	2/27/17	Complete Genome	LFZ	SAMN02384187	GCA_000624395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/395/GCA_000624395.2_ASM62439v2	26404595	EC20120002
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20082034	1412488	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68566	52.2	chromosome:NZ_CP007425.1/CP007425.2	-	1	4762	4501	4/1/14	3/2/17	Complete Genome	LFZ	SAMN02384209	GCA_000625855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/855/GCA_000625855.2_ASM62585v2	24786953	SA20082034
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120200	1412529	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007434.2/CP007434.2	-	1	4764	4498	4/1/14	3/1/17	Complete Genome	LFZ	SAMN02384250	GCA_000626095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/095/GCA_000626095.2_ASM62609v2	24786953	EC20120200
Salmonella enterica subsp. enterica serovar Tennessee str. TXSC_TXSC08-19	1003191	PRJNA65249	65249	Proteobacteria	Gammaproteobacteria	4.86441	52.2	chromosome:NZ_CP007505.1/CP007505.1	-	1	4912	4645	3/28/14	2/26/17	Complete Genome	FDA	SAMN01813424	GCA_000486405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/405/GCA_000486405.2_ASM48640v2	24158624	TXSC_TXSC08-19
Salmonella enterica subsp. enterica serovar Thompson str. RM6836	1064551	PRJNA70669	70669	Proteobacteria	Gammaproteobacteria	4.70765	52.2	chromosome:NC_022525.1/CP006717.1	-	1	4736	4504	9/30/13	2/26/17	Complete Genome	USDA-ARS-WRRC-PSM	SAMN02604282	GCA_000473275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/275/GCA_000473275.1_ASM47327v1	24233585	RM6836
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67	1225522	PRJNA173203	173203	Proteobacteria	Gammaproteobacteria	4.62309	52.2	chromosome:NC_022221.1/CP003786.1	-	1	4685	4247	8/30/13	2/26/17	Complete Genome	"Genomics Research Center, Harbin Medical University"	SAMN01884234	GCA_000462995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/995/GCA_000462995.1_ASM46299v1	-	CDC1983-67
"Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736"	866913	PRJNA50689	50689	Proteobacteria	Gammaproteobacteria	4.82219	52.2	chromosome:NC_021820.1/CP006602.1	-	1	4919	4680	7/16/13	2/26/17	Complete Genome	FDA	SAMN02212496	GCA_000430165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/165/GCA_000430165.1_ASM43016v1	-	08-1736
Pectobacterium carotovorum subsp. carotovorum PCC21	1218933	PRJNA171960	171960	Proteobacteria	Gammaproteobacteria	4.84277	52.2	chromosome:NC_018525.1/CP003776.1	-	1	4340	4115	9/4/12	3/30/17	Complete Genome	Daegu University	SAMN02603169	GCA_000294535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/535/GCA_000294535.1_ASM29453v1	23105077	PCC21
Corynebacterium pseudotuberculosis 267	1089446	PRJNA73515	73515	Terrabacteria group	Actinobacteria	2.33763	52.2	chromosome:NC_017462.1/CP003407.1	-	1	2141	2034	4/10/12	3/30/17	Complete Genome	Rede Paraense de Genomica e Proteomica	SAMN02603753	GCA_000258385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/385/GCA_000258385.1_ASM25838v1	22689248	267
Corynebacterium pseudotuberculosis P54B96	1117942	PRJNA77871	77871	Terrabacteria group	Actinobacteria	2.33766	52.2	chromosome:NC_017031.1/CP003385.1	-	1	2143	1953	3/23/12	3/30/17	Complete Genome	Rede Paraense de Genômica e Proteômica	SAMN02603743	GCA_000255935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/935/GCA_000255935.1_ASM25593v1	-	P54B96
Corynebacterium pseudotuberculosis 3/99-5	1087452	PRJNA73231	73231	Terrabacteria group	Actinobacteria	2.33794	52.2	chromosome:NC_016781.1/CP003152.1	-	1	2144	2020	1/10/12	3/30/17	Complete Genome	Rede Paraense de Genomica e Proteomica	SAMN02603750	GCA_000241855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/855/GCA_000241855.1_ASM24185v1	22887652	3/99-5
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078	1081093	PRJNA72821	72821	Proteobacteria	Gammaproteobacteria	4.63796	52.2	chromosome:NC_016831.1/CP003047.1	-	1	4694	4200	11/16/11	3/5/17	Complete Genome	Genomics Research Center of Harbin Medical University	SAMN02603246	GCA_000235545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/545/GCA_000235545.1_ASM23554v1	22247537	RKS5078
Corynebacterium pseudotuberculosis 1/06-A	1087454	PRJNA73235	73235	Terrabacteria group	Actinobacteria	2.27912	52.2	chromosome:NC_017308.1/CP003082.1	-	1	2101	1860	11/3/11	4/10/17	Complete Genome	Rede Paraense de Genomica e Proteomica	SAMN02603752	GCA_000233735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/735/GCA_000233735.1_ASM23373v1	22843601	1/06-A
Corynebacterium pseudotuberculosis 42/02-A	1087453	PRJNA73233	73233	Terrabacteria group	Actinobacteria	2.33761	52.2	chromosome:NC_017306.1/CP003062.1	-	1	2143	2018	10/3/11	3/30/17	Complete Genome	Rede Paraense de Genomica e Proteomica	SAMN02603751	GCA_000227175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/175/GCA_000227175.1_ASM22717v1	22887652	42/02-A
Corynebacterium pseudotuberculosis PAT10	935298	PRJNA61115	61115	Terrabacteria group	Actinobacteria	2.33532	52.2	chromosome:NC_017305.1/CP002924.1	-	1	2140	1986	7/27/11	3/30/17	Complete Genome	Rede Paraense de Genômica e Proteômica	SAMN02603741	GCA_000221625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/625/GCA_000221625.1_ASM22162v1	22038974	PAT10
Corynebacterium pseudotuberculosis I19	889513	PRJNA52845	52845	Terrabacteria group	Actinobacteria	2.33759	52.2	chromosome:NC_017303.2/CP002251.2	-	1	2143	2024	10/12/10	5/6/17	Complete Genome	Rede Paraense de Genômica e Proteômica	SAMN02603739	GCA_000152065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/065/GCA_000152065.2_ASM15206v2	21037006	I19
Mycobacterium avium subsp. avium Env 77	1078013	PRJNA72223	72223	Terrabacteria group	Actinobacteria	4.58367	68.2	-	AGAQ01	772	4766	4047	12/29/11	5/19/17	Contig	University of Wisconsin- Madison	SAMN02472016	GCA_000240505.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/505/GCA_000240505.2_ASM24050v2	22163226	Env 77
Corynebacterium pseudotuberculosis 1002	679896	PRJNA40687	40687	Terrabacteria group	Actinobacteria	2.33511	52.2	chromosome:NC_017300.1/CP001809.2	-	1	2141	2016	8/6/10	3/30/17	Complete Genome	Minas Gerais Genome Network	SAMN02603609	GCA_000144935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/935/GCA_000144935.2_ASM14493v2	"2,103,700,621,533,160"	1002
Corynebacterium pseudotuberculosis C231	681645	PRJNA40875	40875	Terrabacteria group	Actinobacteria	2.32821	52.2	chromosome:NC_017301.1/CP001829.1	-	1	2133	1996	8/5/10	3/30/17	Complete Genome	University Federal of Minas Gerais	SAMN02604117	GCA_000144675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/675/GCA_000144675.1_ASM14467v1	"2,103,700,621,533,160"	C231
Corynebacterium pseudotuberculosis FRC41	765874	PRJNA48979	48979	Terrabacteria group	Actinobacteria	2.33791	52.2	chromosome:NC_014329.1/CP002097.1	-	1	2144	2021	7/16/10	3/30/17	Complete Genome	"Center for Biotechnology, Bielefeld University"	SAMN02603078	GCA_000143705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/143/705/GCA_000143705.1_ASM14370v1	21192786	FRC41
Salmonella enterica subsp. enterica serovar Typhimurium str. D23580	568708	PRJEA40625	40625	Proteobacteria	Gammaproteobacteria	4.8794	52.2	chromosome:NC_016854.1/FN424405.1	-	1	4998	4737	10/10/09	5/28/17	Complete Genome	Wellcome Trust Sanger Institute	SAMEA2272777	GCA_000027025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/027/025/GCA_000027025.1_ASM2702v1	"1,990,103,623,023,330"	D23580
Salmonella enterica subsp. enterica serovar Enteritidis str. P125109	550537	PRJEA30687	30687	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NC_011294.1/AM933172.1	-	1	4762	4502	9/18/08	2/26/17	Complete Genome	Wellcome Trust Sanger Institute	SAMEA1705941	GCA_000009505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/505/GCA_000009505.1_ASM950v1	18583645	P125109
Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91	550538	PRJEA30689	30689	Proteobacteria	Gammaproteobacteria	4.6587	52.2	chromosome:NC_011274.1/AM933173.1	-	1	4717	4271	9/18/08	2/26/17	Complete Genome	Wellcome Trust Sanger Institute	SAMEA1705927	GCA_000009525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/525/GCA_000009525.1_ASM952v1	18583645	287/91
Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601	554290	PRJEA30943	30943	Proteobacteria	Gammaproteobacteria	4.5818	52.2	chromosome:NC_011147.1/FM200053.1	-	1	4675	4318	8/18/08	2/26/17	Complete Genome	Wellcome Trust Sanger Institute	SAMEA1705953	GCA_000026565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/565/GCA_000026565.1_ASM2656v1	19159446	AKU12601
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150	295319	PRJNA13086	13086	Proteobacteria	Gammaproteobacteria	4.58523	52.2	chromosome:NC_006511.1/CP000026.1	-	1	4678	4319	11/30/04	2/26/17	Complete Genome	Washington University Genome Sequencing Center	SAMN02604316	GCA_000011885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/885/GCA_000011885.1_ASM1188v1	15531882	ATCC 9150
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.84722	30.1	-	NFNY01	150	1902	1771	6/8/17	6/10/17	Contig	Swansea University	SAMN06888323	GCA_002179165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/165/GCA_002179165.1_ASM217916v1	28493321	isolate_W1
Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1765	1454593	PRJNA236664	236664	Proteobacteria	Gammaproteobacteria	4.95472	52.1981	chromosome:NZ_CP014659.2/CP014659.2; plasmid pSAN1-06-0624:NZ_CP014660.1/CP014660.1	-	2	5101	4851	4/15/16	3/22/17	Complete Genome	USDA-ARS-USMARC	SAMN02716855	GCA_001620135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/135/GCA_001620135.2_ASM162013v2	27257192	USDA-ARS-USMARC-1765
Salmonella enterica subsp. enterica serovar Newport str. CVM N1543	858307	PRJNA49975	49975	Proteobacteria	Gammaproteobacteria	4.94654	52.1976	chromosome:NZ_CP010284.1/CP010284.1; plasmid pCVMN1543:NZ_CP009570.1/CP009570.1	-	2	5072	4824	3/12/15	6/15/17	Complete Genome	FDA	SAMN01816118	GCA_000272835.4	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/835/GCA_000272835.4_ASM27283v4	-	CVM N1543
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73849	52.1975	chromosome:NZ_CP022003.1/CP022003.1; plasmid pCFSAN051873:NZ_CP022004.1/CP022004.1	-	2	4841	4565	6/26/17	7/15/17	Complete Genome	Center for Food Safety and Applied Nutrition	SAMN05414452	GCA_001973275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/275/GCA_001973275.2_ASM197327v2	-	CFSAN051873
Salmonella enterica subsp. enterica	59201	PRJNA242847	242847	Proteobacteria	Gammaproteobacteria	4.73876	52.1975	chromosome:NZ_CP020825.1/CP020825.1; plasmid pCFSAN033543:NZ_CP020826.1/CP020826.1	-	2	4841	4563	5/11/17	5/22/17	Complete Genome	FDA	SAMN03702839	GCA_002128365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/365/GCA_002128365.1_ASM212836v1	-	CFSAN033543
Salmonella enterica subsp. enterica	59201	PRJNA242847	242847	Proteobacteria	Gammaproteobacteria	4.73844	52.1975	chromosome:NZ_CP020823.1/CP020823.1; plasmid pCFSAN033541:NZ_CP020824.1/CP020824.1	-	2	4843	4566	5/11/17	5/22/17	Complete Genome	FDA	SAMN03702837	GCA_002128385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/385/GCA_002128385.1_ASM212838v1	-	CFSAN033541
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA288744	288744	Proteobacteria	Gammaproteobacteria	4.7357	52.1975	chromosome:NZ_CP013097.1/CP013097.1; plasmid pCMCC50041:NZ_CP013098.1/CP013098.1	-	2	4833	4557	1/4/16	3/1/17	Complete Genome	Yangzhou University	SAMN03837761	GCA_001484025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/025/GCA_001484025.1_ASM148402v1	-	CMCC50041
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA244356	244356	Proteobacteria	Gammaproteobacteria	4.7383	52.1975	chromosome:NZ_CP008928.1/CP008928.1; plasmid unnamed:NZ_CP008927.1/CP008927.1	-	2	4829	4562	9/12/14	2/27/17	Complete Genome	Los Alamos National Laboratory	SAMN02904629	GCA_000754375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/375/GCA_000754375.1_ASM75437v1	25342692	SEJ
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_0968	886715	PRJNA52491	52491	Proteobacteria	Gammaproteobacteria	4.73903	52.1975	chromosome:NZ_CP007528.1/CP007528.1; plasmid plasmid00:NZ_CP007529.1/CP007529.1	-	2	4828	4554	4/4/14	2/27/17	Complete Genome	FDA	SAMN01041170	GCA_000329365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/365/GCA_000329365.2_ASM32936v2	23383127	CDC_2010K-0968
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA241513	241513	Proteobacteria	Gammaproteobacteria	4.7383	52.1975	chromosome:NZ_CP007507.1/CP007507.1; plasmid unnamed:NZ_CP007508.1/CP007508.1	-	2	4833	4555	4/4/14	2/26/17	Complete Genome	University of Pittsburgh	SAMN02712059	GCA_000612325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/325/GCA_000612325.1_ASM61232v1	-	Durban
Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74	909946	PRJNA56087	56087	Proteobacteria	Gammaproteobacteria	5.06745	52.1975	chromosome:NC_016857.1/CP002487.1; plasmid TY474p1:NC_016858.1/CP002488.1; plasmid TY474p2:NC_017675.1/CP002489.1; plasmid TY474p3:NC_016859.1/CP002490.1	-	4	5227	4971	2/10/11	3/22/17	Complete Genome	Ark Genomics	SAMN02602988	GCA_000188735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/735/GCA_000188735.1_ASM18873v1	21478351	ST4/74
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344	216597	PRJNA50407	50407	Proteobacteria	Gammaproteobacteria	5.06745	52.1975	chromosome:NC_016810.1/FQ312003.1; plasmid pCol1B9_SL1344:NC_017718.1/HE654725.1; plasmid pRSF1010_SL1344:NC_017719.1/HE654726.1; plasmid pSLT_SL1344:NC_017720.1/HE654724.1	-	4	5227	4970	7/23/10	2/26/17	Complete Genome	The Wellcome Trust Sanger Institute	SAMEA3138382	GCA_000210855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/855/GCA_000210855.2_ASM21085v2	22538806	SL1344
Salmonella enterica	28901	PRJNA340047	340047	Proteobacteria	Gammaproteobacteria	4.7456	52.1962	chromosome:NZ_CP017177.1/CP017177.1; plasmid unnamed1:NZ_CP017178.1/CP017178.1	-	2	4852	4549	9/19/17	9/21/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN05631013	GCA_002313105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/105/GCA_002313105.1_ASM231310v1	-	FORC_056
Salmonella enterica subsp. enterica serovar Enteritidis str. 18569	696867	PRJNA41929	41929	Proteobacteria	Gammaproteobacteria	4.74533	52.1962	chromosome:NZ_CP011394.1/CP011394.1; plasmid pCFSAN000006:NZ_CP011395.1/CP011395.1	-	2	4845	4558	5/11/15	2/27/17	Complete Genome	FDA	SAMN01041085	GCA_000335875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/875/GCA_000335875.2_ASM33587v2	23383127	18569
Salmonella enterica	28901	PRJNA290698	290698	Proteobacteria	Gammaproteobacteria	4.79769	52.1951	chromosome:NZ_CP012396.1/CP012396.1; plasmid pFORC19:NZ_CP012397.1/CP012397.1	-	2	4927	4640	8/16/16	3/1/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN03896006	GCA_001705055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/055/GCA_001705055.1_ASM170505v1	-	FORC_019
Salmonella enterica subsp. enterica	59201	PRJNA387390	387390	Proteobacteria	Gammaproteobacteria	4.86186	52.1912	chromosome:NZ_CP021909.1/CP021909.1; plasmid pST1120:NZ_CP021910.1/CP021910.1	-	2	4966	4725	6/20/17	6/22/17	Complete Genome	Ajou University	SAMN06622672	GCA_002201855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/855/GCA_002201855.1_ASM220185v1	-	ST1120
Tropheryma whipplei str. Neuro1	1293500	PRJEB1430	189522	Terrabacteria group	Actinobacteria	0.927567	46.3	-	CAUD02	1	866	783	3/5/13	4/2/17	Scaffold	URMITE	SAMEA2272050	GCA_000346085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/085/GCA_000346085.2_ASM34608v2	-	Neuro1
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.0281	52.1897	chromosome:NZ_CP016012.1/CP016012.1; plasmid pCFSAN003890:NZ_CP016013.1/CP016013.1	-	2	5189	4900	12/7/16	3/2/17	Complete Genome	Center for Food Safety and Applied Nutrition	SAMN05172402	GCA_001890185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/185/GCA_001890185.1_ASM189018v1	-	CFSAN003890
Rahnella sp. Y9602	741091	PRJNA50601	50601	Proteobacteria	Gammaproteobacteria	5.61425	52.1829	chromosome:NC_015061.1/CP002505.1; plasmid pRAHAQ01:NC_015062.1/CP002506.1; plasmid pRAHAQ02:NC_015063.1/CP002507.1	-	3	5245	5084	2/2/11	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713582	GCA_000187705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/705/GCA_000187705.1_ASM18770v1	22461551	Y9602
Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1783	1454583	PRJNA236652	236652	Proteobacteria	Gammaproteobacteria	4.8047	52.1827	chromosome:NZ_CP014661.1/CP014661.1; plasmid pSAN1-2010K-2577:NZ_CP014662.1/CP014662.1	-	2	4877	4626	4/15/16	3/1/17	Complete Genome	USDA-ARS-USMARC	SAMN02716860	GCA_001620155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/155/GCA_001620155.1_ASM162015v1	27257192	USDA-ARS-USMARC-1783
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.04324	52.1809	chromosome:NZ_CP016412.1/CP016412.1; plasmid pCVM44454:NZ_CP016413.1/CP016413.1	-	2	5144	4817	1/4/17	3/2/17	Complete Genome	FDA	SAMN05255999	GCA_001931615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/615/GCA_001931615.1_ASM193161v1	-	CVM44454
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA292666	292666	Proteobacteria	Gammaproteobacteria	5.05063	52.1787	chromosome 1:NZ_CP016408.1/CP016408.1; plasmid pFSIS1502916:NZ_CP016409.1/CP016409.1	-	2	5155	4825	1/4/17	3/2/17	Complete Genome	FDA	SAMN04364590	GCA_001931575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/575/GCA_001931575.1_ASM193157v1	-	FSIS1502916
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA292666	292666	Proteobacteria	Gammaproteobacteria	5.05025	52.1784	chromosome:NZ_CP016406.1/CP016406.1; plasmid pFSIS1502169:NZ_CP016407.1/CP016407.1	-	2	5158	4817	1/4/17	3/2/17	Complete Genome	FDA	SAMN04285042	GCA_001931555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/555/GCA_001931555.1_ASM193155v1	-	FSIS1502169
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA292661	292661	Proteobacteria	Gammaproteobacteria	5.04393	52.1744	chromosome:NZ_CP016410.1/CP016410.1; plasmid pN55391:NZ_CP016411.1/CP016411.1	-	2	5144	4817	1/4/17	3/2/17	Complete Genome	FDA	SAMN03988471	GCA_001931595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/595/GCA_001931595.1_ASM193159v1	-	N55391
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA288148	288148	Proteobacteria	Gammaproteobacteria	5.08819	52.1742	chromosome:NZ_CP012681.1/CP012681.1; plasmid p33673_IncF:NZ_CP012683.1/CP012683.1; plasmid p33676_4.5:NZ_CP012684.1/CP012684.1; plasmid p33676_IncA/C:NZ_CP012682.1/CP012682.1	-	4	5263	4886	9/17/15	2/28/17	Complete Genome	"Instituto de Biotecnologia, UNAM"	SAMN03795193	GCA_001293505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/505/GCA_001293505.1_ASM129350v1	-	33676
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189	1173427	PRJNA159279	159279	Proteobacteria	Gammaproteobacteria	4.80881	52.174	chromosome:NC_021844.1/CP006053.1; plasmid unnamed:NC_021817.1/CP006054.1	-	2	4857	4606	7/16/13	2/26/17	Complete Genome	FDA	SAMN01823701	GCA_000439415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/415/GCA_000439415.1_ASM43941v1	"2,415,862,425,995,190"	CFSAN000189
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67	321314	PRJNA9618	9618	Proteobacteria	Gammaproteobacteria	4.944	52.1737	chromosome:NC_006905.1/AE017220.1; plasmid pSC138:NC_006856.1/AY509004.1; plasmid pSCV50:NC_006855.1/AY509003.1	-	3	5131	4667	4/1/05	2/26/17	Complete Genome	"Chang Gung Genomic Medical Center, Chang Gung Memorial Hospital"	SAMN02603109	GCA_000008105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/105/GCA_000008105.1_ASM810v1	15781495	SC-B67
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921	1271862	PRJNA184140	184140	Proteobacteria	Gammaproteobacteria	5.08922	52.1726	chromosome:NC_021814.1/CP006048.1; plasmid unnamed:NC_021815.1/CP006050.1; plasmid unnamed2:NC_021843.1/CP006051.1; plasmid unnamed3:NC_021816.1/CP006052.1	-	4	5225	4939	7/16/13	2/27/17	Complete Genome	FDA	SAMN01832087	GCA_000430145.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/145/GCA_000430145.3_ASM43014v3	24356834	CFSAN001921
Geobacillus lituanicus	169283	PRJNA347631	347631	Terrabacteria group	Firmicutes	3.49951	52.1704	chromosome:NZ_CP017692.1/CP017692.1; plasmid pLDW-3:NZ_CP017693.1/CP017693.1	-	2	3603	3198	8/8/17	8/10/17	Complete Genome	Kyungpook National University	SAMN05894097	GCA_002243605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/605/GCA_002243605.1_ASM224360v1	-	N-3
Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001588	1410916	PRJNA224206	224206	Proteobacteria	Gammaproteobacteria	4.76824	52.169	chromosome:NZ_CP012833.1/CP012833.1; plasmid pCFSAN001588_001:NZ_CP012834.1/CP012834.1; plasmid pCFSAN001588_002:NZ_CP012835.1/CP012835.1	-	3	4880	4564	10/6/15	2/28/17	Complete Genome	FDA	SAMN02383555	GCA_000505365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/365/GCA_000505365.2_ASM50536v2	26823571	CFSAN001588
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.94397	52.1667	chromosome:NZ_CP014994.1/CP014994.1; plasmid unnamed:NZ_CP014995.1/CP014995.1	-	2	5008	4722	4/6/16	3/1/17	Complete Genome	New York State Dept. of Health - Wadsworth Center	SAMN02261218	GCA_001535315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/315/GCA_001535315.2_ASM153531v2	-	CFSAN001387
Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992	1267753	PRJNA183458	183458	Proteobacteria	Gammaproteobacteria	4.67527	52.1662	chromosome:NC_020307.1/CP004027.1; plasmid pCFSAN001992_1:NC_020306.1/CP004026.1; plasmid pCFSAN001992_2:NC_020308.1/CP004028.1	-	3	4762	4454	2/20/13	2/26/17	Complete Genome	FDA	SAMN01832085	GCA_000341425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/425/GCA_000341425.1_ASM34142v1	23516208	CFSAN001992
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.859	52.1648	chromosome:NZ_CP019204.1/CP019204.1; plasmid pCFSAN004173:NZ_CP019205.1/CP019205.1	-	2	4928	4685	1/18/17	3/2/17	Complete Genome	Center for Food Safety and Applied Nutrition	SAMN05915913	GCA_001953675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/675/GCA_001953675.1_ASM195367v1	-	CFSAN004173
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.859	52.1648	chromosome:NZ_CP019206.1/CP019206.1; plasmid pCFSAN004174:NZ_CP019207.1/CP019207.1	-	2	4928	4685	1/18/17	3/2/17	Complete Genome	Center for Food Safety and Applied Nutrition	SAMN05915912	GCA_001953695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/695/GCA_001953695.1_ASM195369v1	-	CFSAN004174
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.859	52.1648	chromosome:NZ_CP019172.1/CP019172.1; plasmid pCFSAN004175:NZ_CP019173.1/CP019173.1	-	2	4928	4686	1/17/17	3/3/17	Complete Genome	Center for Food Safety and Applied Nutrition	SAMN05915911	GCA_001952995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/995/GCA_001952995.1_ASM195299v1	-	CFSAN004175
Rahnella aquatilis HX2	1151116	PRJNA85539	85539	Proteobacteria	Gammaproteobacteria	5.6568	52.1505	chromosome:NC_017047.1/CP003403.1; plasmid PRA1:NC_017060.1/CP003404.1; plasmid PRA2:NC_017807.1/CP003405.1; plasmid PRA22:NC_017773.1/CP003406.1	-	4	5235	5017	3/21/12	4/7/17	Complete Genome	CHINA AGRICULTURAL UNIVERSITY	SAMN02603118	GCA_000255535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/535/GCA_000255535.1_ASM25553v1	23144397	HX2
Salmonella enterica subsp. enterica serovar Weltevreden str. 1655	1173939	PRJNA161807	161807	Proteobacteria	Gammaproteobacteria	5.12906	52.1457	chromosome:NZ_CP014996.1/CP014996.1; plasmid unnamed:NZ_CP014997.1/CP014997.1	-	2	5261	4937	4/6/16	3/1/17	Complete Genome	FDA	SAMN02568587	GCA_001612515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/515/GCA_001612515.1_ASM161251v1	-	1655
Salmonella enterica subsp. enterica serovar Dublin str. ATCC 39184	687860	PRJNA41463	41463	Proteobacteria	Gammaproteobacteria	4.91714	52.1454	chromosome:NZ_CP019179.1/CP019179.1; plasmid pATCC39184:NZ_CP019180.1/CP019180.1	-	2	5047	4702	1/17/17	3/2/17	Complete Genome	FDA	SAMN01041081	GCA_001953035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/035/GCA_001953035.1_ASM195303v1	-	ATCC 39184
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853	439851	PRJNA19467	19467	Proteobacteria	Gammaproteobacteria	4.91746	52.1454	chromosome:NC_011205.1/CP001144.1; plasmid pCT02021853_74:NC_011204.1/CP001143.1	-	2	5050	4731	9/4/08	2/26/17	Complete Genome	TIGR	SAMN02604065	GCA_000020925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/925/GCA_000020925.1_ASM2092v1	21602358	CT_02021853
Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1727	1454584	PRJNA236655	236655	Proteobacteria	Gammaproteobacteria	4.98054	52.1435	chromosome:NZ_CP014621.2/CP014621.2; plasmid pSAN1-1727:NZ_CP014622.1/CP014622.1	-	2	5150	4885	4/15/16	3/11/17	Complete Genome	USDA-ARS-USMARC	SAMN02716850	GCA_001620205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/205/GCA_001620205.2_ASM162020v2	27257192	USDA-ARS-USMARC-1727
Salmonella enterica subsp. enterica serovar Newport str. CVM 22462	858305	PRJNA49971	49971	Proteobacteria	Gammaproteobacteria	5.1212	52.1435	chromosome:NZ_CP010280.1/CP010280.1; plasmid pCFSAN000934_02:NZ_CP009567.1/CP009567.1; plasmid pCFSAN000934_03:NZ_CP009568.1/CP009568.1; plasmid pCVM22462:NZ_CP009566.1/CP009566.1	-	4	5318	5053	1/7/15	2/27/17	Complete Genome	FDA	SAMN01813482	GCA_000272895.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/895/GCA_000272895.3_ASM27289v3	-	CVM 22462
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.95753	52.142	chromosome 1:NZ_LN890522.1/LN890522.1; plasmid 2:NZ_LN890523.1/LN890523.1	-	2	5026	4697	10/20/15	2/28/17	Complete Genome	SC	SAMEA2336231	GCA_001409155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/155/GCA_001409155.1_98_11262	-	2511STDY5712384
Salmonella enterica subsp. enterica serovar Typhimurium str. CDC 2010K-1587	1454641	PRJNA236710	236710	Proteobacteria	Gammaproteobacteria	5.0083	52.1416	chromosome:NZ_CP014965.1/CP014965.1; plasmid pSTY1-2010K-1587:NZ_CP014966.1/CP014966.1	-	2	5150	4894	4/19/16	3/1/17	Complete Genome	USDA-ARS-USMARC	SAMN02716879	GCA_001623645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/645/GCA_001623645.1_ASM162364v1	-	CDC 2010K-1587
Xanthomonas axonopodis pv. cajani	487827	PRJNA298612	298612	Proteobacteria	Gammaproteobacteria	5.41058	64.5	-	LOKQ01	312	4947	4415	3/6/17	3/9/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN04145205	GCA_002019105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/105/GCA_002019105.1_ASM201910v1	-	LMG558
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.22862	52.1414	chromosome 1:NZ_LN890520.1/LN890520.1; plasmid 2:NZ_LN890521.1/LN890521.1	-	2	5359	5028	10/20/15	2/28/17	Complete Genome	SC	SAMEA1904401	GCA_001409195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/195/GCA_001409195.1_C2346	-	2511STDY5462413
Geobacillus sp. LC300	1519377	PRJNA254417	254417	Terrabacteria group	Firmicutes	3.53258	52.1414	chromosome:CP008903.1; plasmid pGt35:CP008904.1	-	2	3330	2847	8/3/15	8/3/15	Complete Genome	University of Delaware	SAMN02903857	GCA_001191625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/625/GCA_001191625.1_ASM119162v1	-	LC300
Salmonella enterica	28901	PRJNA342395	342395	Proteobacteria	Gammaproteobacteria	4.77664	52.1411	chromosome:NZ_CP017232.1/CP017232.1; plasmid pFORC51:NZ_CP017233.1/CP017233.1	-	2	4900	4586	9/19/17	9/21/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN05756207	GCA_002313085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/085/GCA_002313085.1_ASM231308v1	-	FORC_051
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.16169	52.1407	chromosome 1:NZ_LN890518.1/LN890518.1; plasmid 2:NZ_LN890519.1/LN890519.1	-	2	5295	4977	10/20/15	3/1/17	Complete Genome	SC	SAMEA1904377	GCA_001409135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/135/GCA_001409135.1_10259	-	2511STDY5462388
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.84722	52.1256	chromosome 1:NZ_LT904888.1/LT904888.1; plasmid 2:NZ_LT904889.1/LT904889.1	-	2	5050	4618	8/4/17	8/17/17	Complete Genome	SC	SAMEA2055444	GCA_001359015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/015/GCA_001359015.2_129_0238	-	129-0238-M
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.09911	52.1216	chromosome 1:NZ_LN890524.1/LN890524.1; plasmid 2:NZ_LN890525.1/LN890525.1; plasmid 3:NZ_LN890526.1/LN890526.1	-	3	5255	4929	10/20/15	2/28/17	Complete Genome	SC	SAMEA2336232	GCA_001409175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/175/GCA_001409175.1_99_3134	-	2511STDY5712385
Anaplasma marginale str. Gypsy Plains	1412840	PRJNA224303	224303	Proteobacteria	Alphaproteobacteria	1.19862	49.7	chromosome:NC_022784.1/CP006846.1	-	1	1039	848	11/5/13	4/2/17	Chromosome	inmegen	SAMN02383579	GCA_000495495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/495/GCA_000495495.1_ASM49549v1	25364572	Gypsy Plains
Shigella dysenteriae 155-74	766142	PRJNA49063	49063	Proteobacteria	Gammaproteobacteria	5.1626	50.8	-	AFFZ01	113	5670	4649	5/4/11	8/8/17	Contig	Institute for Genome Sciences	SAMN00792439	GCA_000211935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/211/935/GCA_000211935.2_ASM21193v2	-	155-74
Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002069	1271864	PRJNA184142	184142	Proteobacteria	Gammaproteobacteria	4.93199	52.1204	chromosome:NC_021812.2/CP005390.2; plasmid pCFSAN002069_01:NC_021813.2/CP005389.2; plasmid pCFSAN002069_02:NC_021842.2/CP005391.2	-	3	5046	4784	7/16/13	2/26/17	Complete Genome	FDA	SAMN01832089	GCA_000430085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/085/GCA_000430085.2_ASM43008v2	24903882	CFSAN002069
Shewanella putrefaciens HRCR-6	1305841	PRJNA195875	195875	Proteobacteria	Gammaproteobacteria	3.63135	45.4	-	JAEU01	250	3110	2783	1/10/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02584939	GCA_000519065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/065/GCA_000519065.1_ASM51906v1	-	HRCR-6
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA344760	344760	Proteobacteria	Gammaproteobacteria	4.90056	52.1191	chromosome:NZ_CP017621.1/CP017621.1; plasmid unnamed1:NZ_CP017620.1/CP017620.1	-	2	4999	4646	11/28/16	3/2/17	Complete Genome	Canadian Food Inspection Agency	SAMN05832872	GCA_001887015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/015/GCA_001887015.1_ASM188701v1	-	22792
Salmonella enterica subsp. enterica serovar Typhimurium str. CDC H2662	1454640	PRJNA236709	236709	Proteobacteria	Gammaproteobacteria	4.97843	52.1189	chromosome:NZ_CP014979.2/CP014979.2; plasmid pSTY1-H2662:NZ_CP014980.1/CP014980.1	-	2	5123	4856	4/19/16	3/2/17	Complete Genome	USDA-ARS-USMARC	SAMN02716865	GCA_001623825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/825/GCA_001623825.2_ASM162382v2	-	CDC H2662
Salmonella enterica subsp. enterica serovar Typhimurium str. CDC 2011K-1702	1454643	PRJNA236712	236712	Proteobacteria	Gammaproteobacteria	5.00034	52.1188	chromosome:NZ_CP014967.1/CP014967.1; plasmid pSTY1-2011K-1702:NZ_CP014968.1/CP014968.1	-	2	5133	4860	4/19/16	3/1/17	Complete Genome	USDA-ARS-USMARC	SAMN02716880	GCA_001623685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/685/GCA_001623685.1_ASM162368v1	-	CDC 2011K-1702
Salmonella enterica	28901	PRJNA315190	315190	Proteobacteria	Gammaproteobacteria	5.03752	52.1187	chromosome:CP015598.1; plasmid pFORC_030:CP015599.1	-	2	5083	4976	4/5/17	4/5/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN04550937	GCA_002079245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/245/GCA_002079245.1_ASM207924v1	-	FORC_030
Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1808	1454630	PRJNA236699	236699	Proteobacteria	Gammaproteobacteria	5.03091	52.1187	chromosome:NZ_CP014969.1/CP014969.1; plasmid pSTY1-1808:NZ_CP014970.1/CP014970.1	-	2	5185	4913	4/19/16	3/1/17	Complete Genome	USDA-ARS-USMARC	SAMN02716861	GCA_001623725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/725/GCA_001623725.1_ASM162372v1	-	USDA-ARS-USMARC-1808
Salmonella enterica subsp. enterica serovar Typhimurium str. CDC 2009K-1640	1454644	PRJNA236713	236713	Proteobacteria	Gammaproteobacteria	5.02773	52.1187	chromosome:NZ_CP014975.1/CP014975.1; plasmid pSTY1-2009K-1640:NZ_CP014976.1/CP014976.1	-	2	5186	4919	4/19/16	3/1/17	Complete Genome	USDA-ARS-USMARC	SAMN02716877	GCA_001623805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/805/GCA_001623805.1_ASM162380v1	-	CDC 2009K-1640
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA288151	288151	Proteobacteria	Gammaproteobacteria	5.02765	52.1187	chromosome:NZ_CP014358.1/CP014358.1; plasmid pYU15_94:NZ_CP014359.1/CP014359.1	-	2	5188	4913	2/26/16	3/1/17	Complete Genome	"Instituto de Biotecnologia, UNAM"	SAMN03795199	GCA_001576255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/255/GCA_001576255.1_ASM157625v1	27081132	YU15
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB1666	221834	Proteobacteria	Gammaproteobacteria	5.02766	52.1187	chromosome I:NC_022569.1/HF937208.1; plasmid II:NC_022570.1/HF937209.1	-	2	5192	4921	9/21/13	2/26/17	Complete Genome	WTSI	SAMEA2272504	GCA_000493675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/675/GCA_000493675.1_DT104	24030491	DT104
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA245324	245324	Proteobacteria	Gammaproteobacteria	5.05218	52.1186	chromosome:NZ_CP012985.1/CP012985.1; plasmid pRM9437:NZ_CP014577.1/CP014577.1	-	2	5219	4949	4/8/16	3/5/17	Complete Genome	USDA ARS	SAMN04038553	GCA_001617585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/585/GCA_001617585.1_ASM161758v1	-	RM9437
Thermovibrio ammonificans HB-1	648996	PRJNA49403	49403	Aquificae	Aquificae	1.75953	52.1174	chromosome:NC_014926.1/CP002444.1; plasmid pTHEAM01:NC_014917.1/CP002445.1	-	2	1863	1801	1/7/11	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713575	GCA_000185805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/805/GCA_000185805.1_ASM18580v1	-	HB-1
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA262006	262006	Proteobacteria	Gammaproteobacteria	4.78191	52.1173	chromosome:NZ_CP009768.1/CP009768.1; plasmid pFORC7:NZ_CP009767.1/CP009767.1	-	2	4889	4607	10/1/15	2/28/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN03140319	GCA_001305235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/305/235/GCA_001305235.1_ASM130523v1	-	FORC_007
Corynebacterium jeikeium ATCC 43734	525262	PRJNA31445	31445	Terrabacteria group	Actinobacteria	2.49282	61.3	-	ACYW01	21	2210	2077	9/16/09	3/30/17	Scaffold	BCM	SAMN00001506	GCA_000163435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/435/GCA_000163435.1_ASM16343v1	-	ATCC 43734
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA242139	242139	Proteobacteria	Gammaproteobacteria	5.02536	52.1164	chromosome:NZ_CP007581.1/CP007581.1; plasmid unnamed:NZ_CP007582.1/CP007582.1	-	2	5186	4862	4/23/14	2/26/17	Complete Genome	University of California	SAMN02692256	GCA_000636135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/135/GCA_000636135.1_ASM63613v1	-	138736
Salmonella enterica subsp. enterica serovar Heidelberg str. 41578	1124936	PRJNA78477	78477	Proteobacteria	Gammaproteobacteria	4.95148	52.1153	chromosome:NC_021810.1/CP004086.1; plasmid pSEEH1578_01:NC_021811.1/CP004087.1; plasmid pSEEH1578_02:NC_021841.1/CP004088.1; plasmid pSEEH1578_03:NC_021869.1/CP004857.1	-	4	5095	4827	7/16/13	2/26/17	Complete Genome	FDA	SAMN01088008	GCA_000430105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/105/GCA_000430105.1_ASM43010v1	24732280	41578
Nitrosococcus oceani C-27	314279	PRJNA252958	252958	Proteobacteria	Gammaproteobacteria	3.57992	50	-	JPGN01	541	3301	3099	8/15/14	4/10/17	Scaffold	Nitrification Network	SAMN02864944	GCA_000740745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/745/GCA_000740745.1_ASM74074v1	-	C-27
Candidatus Pelagibacter ubique HTCC1016	1115650	PRJNA165601	165601	Proteobacteria	Alphaproteobacteria	1.2971	29.6	-	ARCW01	4	1377	1331	4/19/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02256429	GCA_000372905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/905/GCA_000372905.1_ASM37290v1	-	HTCC1016
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA305824	305824	Proteobacteria	Gammaproteobacteria	4.79124	52.1149	chromosome:NZ_CP016504.1/CP016504.1; plasmid pSH12-007_2:NZ_CP016505.1/CP016505.1; plasmid pSH12-007_37:NZ_CP016506.1/CP016506.1	-	3	4872	4626	7/21/16	3/1/17	Complete Genome	Laboratoire de sante publique du Quebec	SAMN04334633	GCA_001689935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/935/GCA_001689935.1_ASM168993v1	-	SH12-007
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA305824	305824	Proteobacteria	Gammaproteobacteria	4.79124	52.1149	chromosome:NZ_CP016507.1/CP016507.1; plasmid pSH12-003_2:NZ_CP016508.1/CP016508.1; plasmid pSH12-003_37:NZ_CP016509.1/CP016509.1	-	3	4872	4626	7/21/16	3/1/17	Complete Genome	Laboratoire de sante publique du Quebec	SAMN04334629	GCA_001690005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/005/GCA_001690005.1_ASM169000v1	-	SH12-003
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA298211	298211	Proteobacteria	Gammaproteobacteria	4.7914	52.1145	chromosome:NZ_CP016573.1/CP016573.1; plasmid pAMR588-04-00435_2:NZ_CP016574.1/CP016574.1; plasmid pAMR588-04-00435_37:NZ_CP016575.1/CP016575.1	-	3	4874	4623	7/22/16	3/1/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN05263516	GCA_001692515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/515/GCA_001692515.1_ASM169251v1	-	AMR588-04-00435
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA298211	298211	Proteobacteria	Gammaproteobacteria	4.7914	52.1145	chromosome:NZ_CP016576.1/CP016576.1; plasmid pAMR588-04-00437_2:NZ_CP016577.1/CP016577.1; plasmid pAMR588-04-00437_37:NZ_CP016578.1/CP016578.1	-	3	4877	4627	7/22/16	3/1/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN05263517	GCA_001692615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/615/GCA_001692615.1_ASM169261v1	-	AMR588-04-00437
Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002064	1299044	PRJNA191769	191769	Proteobacteria	Gammaproteobacteria	4.82156	52.114	chromosome:NZ_CP005995.1/CP005995.1; plasmid unnamed:NZ_CP005994.1/CP005994.1	-	2	4901	4639	12/11/13	2/26/17	Complete Genome	FDA	SAMN01933202	GCA_000505705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/705/GCA_000505705.1_ASM50570v1	24903882	CFSAN002064
Salmonella enterica subsp. enterica serovar Heidelberg str. B182	1160717	PRJNA88529	88529	Proteobacteria	Gammaproteobacteria	4.78805	52.1137	chromosome:NC_017623.1/CP003416.1; plasmid pB182_37:NC_017624.1/CP003417.1	-	2	4888	4555	4/10/12	2/26/17	Complete Genome	CNRS-UMR6290	SAMN02603149	GCA_000258365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/365/GCA_000258365.1_ASM25836v1	22689230	B182
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA298211	298211	Proteobacteria	Gammaproteobacteria	4.78892	52.1134	chromosome:NZ_CP016563.1/CP016563.1; plasmid pA3EZ223_37:NZ_CP016564.1/CP016564.1	-	2	4875	4626	7/22/16	3/1/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN05277890	GCA_001692495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/495/GCA_001692495.1_ASM169249v1	-	A3EZ223
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA305824	305824	Proteobacteria	Gammaproteobacteria	4.78803	52.1134	chromosome:NZ_CP016579.1/CP016579.1; plasmid pSH13-006_37:NZ_CP016580.1/CP016580.1	-	2	4873	4623	7/22/16	3/1/17	Complete Genome	Laboratoire de sante publique du Quebec	SAMN04334642	GCA_001692535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/535/GCA_001692535.1_ASM169253v1	-	SH13-006
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA298211	298211	Proteobacteria	Gammaproteobacteria	4.78892	52.1134	chromosome:NZ_CP016561.1/CP016561.1; plasmid pA3ES40_37:NZ_CP016562.1/CP016562.1	-	2	4874	4626	7/22/16	3/1/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN05277889	GCA_001692555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/555/GCA_001692555.1_ASM169255v1	-	A3ES40
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA305824	305824	Proteobacteria	Gammaproteobacteria	4.78803	52.1134	chromosome:NZ_CP016586.1/CP016586.1; plasmid pSH13-004_37:NZ_CP016587.1/CP016587.1	-	2	4876	4626	7/22/16	3/1/17	Complete Genome	Laboratoire de sante publique du Quebec	SAMN04334640	GCA_001692635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/635/GCA_001692635.1_ASM169263v1	-	SH13-004
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA305824	305824	Proteobacteria	Gammaproteobacteria	4.79396	52.1099	chromosome:NZ_CP016510.1/CP016510.1; plasmid pSH14-028_2:NZ_CP016511.1/CP016511.1; plasmid pSH14-028_37:NZ_CP016512.1/CP016512.1; plasmid pSH14-028_6:NZ_CP016513.1/CP016513.1	-	4	4889	4642	7/21/16	3/1/17	Complete Genome	Laboratoire de sante publique du Quebec	SAMN04334672	GCA_001690035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/035/GCA_001690035.1_ASM169003v1	-	SH14-028
Mycobacterium ulcerans subsp. shinshuense	1124626	PRJDB5111	339613	Terrabacteria group	Actinobacteria	5.91459	64.8	chromosome:AP017635.1	-	1	-	-	8/27/16	8/27/16	Chromosome	National Institute of Infectious Diseases	SAMD00057810	GCA_002356495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/495/GCA_002356495.1_ASM235649v1	-	ATCC 33728
Mycoplasma agalactiae 14628	1110504	PRJNA76359	76359	Terrabacteria group	Tenericutes	0.919593	29.9	-	AJPR01	22	814	742	6/11/12	4/7/17	Contig	EVOLMYCO	SAMN02471344	GCA_000266865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/865/GCA_000266865.1_ASM26686v1	22522685	14628
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.90172	52.1088	chromosome:NZ_CP016010.1/CP016010.1; plasmid pCFSAN001660:NZ_CP016011.1/CP016011.1	-	2	5002	4734	12/7/16	3/2/17	Complete Genome	Center for Food Safety and Applied Nutrition	SAMN05172400	GCA_001890165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/165/GCA_001890165.1_ASM189016v1	-	CFSAN001660
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA256479	256479	Proteobacteria	Gammaproteobacteria	4.83176	52.1085	chromosome:NZ_CP009102.1/CP009102.1; plasmid pSTY1:NZ_CP009103.1/CP009103.1	-	2	4917	4661	8/22/14	2/26/17	Complete Genome	Okinawa Institute of Advanced Sciences	SAMN02943517	GCA_000743055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/055/GCA_000743055.1_ASM74305v1	25278532	ATCC 13311
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.99472	52.1077	chromosome 1:NZ_LT904891.1/LT904891.1; plasmid 2:NZ_LT904892.1/LT904892.1	-	2	5263	4827	8/4/17	8/17/17	Complete Genome	SC	SAMEA1930249	GCA_001357935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/935/GCA_001357935.2_80_2002	-	80-2002
Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1896	1454636	PRJNA236705	236705	Proteobacteria	Gammaproteobacteria	5.00374	52.1029	chromosome:NZ_CP014977.1/CP014977.1; plasmid pSTY1-1896:NZ_CP014978.1/CP014978.1	-	2	5149	4875	4/19/16	3/1/17	Complete Genome	USDA-ARS-USMARC	SAMN02716869	GCA_001623845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/845/GCA_001623845.1_ASM162384v1	-	USDA-ARS-USMARC-1896
Corynebacterium pseudotuberculosis	1719	PRJNA256958	256958	Terrabacteria group	Actinobacteria	2.3699	52.1	chromosome:NZ_CP023395.1/CP023395.1	-	1	2192	2054	9/18/17	9/20/17	Complete Genome	Federal University of Para	SAMN05509268	GCA_001969145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/145/GCA_001969145.2_ASM196914v2	-	MB278
Oenococcus oeni AWRIB429	655225	PRJNA38663	38663	Terrabacteria group	Firmicutes	1.9277	37.9	-	ACSE01	58	2022	1843	3/3/10	3/22/17	Contig	The Australian Wine Research Institute (AWRI)	SAMN02471125	GCA_000175355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/355/GCA_000175355.1_ASM17535v1	20111862	AWRIB429
Geobacillus stearothermophilus	1422	PRJNA327158	327158	Terrabacteria group	Firmicutes	3.46682	52.1	chromosome:NZ_CP016552.1/CP016552.1	-	1	3674	3179	9/13/17	9/15/17	Complete Genome	University College Cork	SAMN05300636	GCA_002300135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/135/GCA_002300135.1_ASM230013v1	-	DSM 458
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.75845	52.1	chromosome 1:NZ_LT904883.1/LT904883.1	-	1	4954	4534	8/4/17	8/17/17	Complete Genome	SC	SAMEA2072815	GCA_001048035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/035/GCA_001048035.2_ERL103914	-	ERL103914
Salinispora tropica CNS416	1169195	PRJNA175191	175191	Terrabacteria group	Actinobacteria	5.18064	69.5	-	ARHQ01	95	4857	4540	4/22/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441360	GCA_000377085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/085/GCA_000377085.1_ASM37708v1	-	CNS416
Desulfitobacterium hafniense DP7	537010	PRJNA30023	30023	Terrabacteria group	Firmicutes	5.20342	47.6	-	AFZX01	63	4945	4763	12/14/11	5/18/17	Scaffold	Washington University Genome Sequencing Center	SAMN02299420	GCA_000238035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/035/GCA_000238035.1_ASM23803v1	-	DP7
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7577	52.1	chromosome 1:NZ_LT904876.1/LT904876.1	-	1	4946	4536	8/4/17	8/17/17	Complete Genome	SC	SAMEA2072817	GCA_001095585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/585/GCA_001095585.2_ERL114000	-	ERL114000
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.77771	52.1	chromosome 1:NZ_LT904882.1/LT904882.1	-	1	4965	4539	8/4/17	8/17/17	Complete Genome	SC	SAMEA2072798	GCA_001104165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/165/GCA_001104165.2_E00-7866	-	SGB89
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.78404	52.1	chromosome 1:NZ_LT904870.1/LT904870.2	-	1	4963	4532	8/4/17	8/28/17	Complete Genome	SC	SAMEA2072799	GCA_001104885.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/885/GCA_001104885.3_10349_1_89_2	-	SGB90
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.78147	52.1	chromosome 1:NZ_LT904890.1/LT904890.1	-	1	4974	4551	8/4/17	8/17/17	Complete Genome	SC	SAMEA2150110	GCA_001118185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/185/GCA_001118185.2_H12ESR00394-001A	-	H12ESR00394-001A
Salinispora arenicola CNS673	1144930	PRJNA169796	169796	Terrabacteria group	Actinobacteria	5.8757	69.5	-	ARER01	83	5367	5046	4/19/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02441707	GCA_000373845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/845/GCA_000373845.1_ASM37384v1	-	CNS673
Delftia acidovorans CCUG 15835	883100	PRJNA52169	52169	Proteobacteria	Betaproteobacteria	6.82317	66.5	-	AGYY01	55	6285	6084	6/14/13	4/1/17	Scaffold	Broad Institute	SAMN02596774	GCA_000411215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/215/GCA_000411215.1_Delf_acid_CCUG_15835_V1	-	CCUG 15835
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.76174	52.1	chromosome 1:NZ_LT904887.1/LT904887.1	-	1	4953	4535	8/4/17	8/17/17	Complete Genome	SC	SAMEA1930246	GCA_001119245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/245/GCA_001119245.2_76_1292	-	76-1292
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.80084	52.1	chromosome 1:NZ_LT904884.1/LT904884.1	-	1	5007	4590	8/4/17	8/17/17	Complete Genome	SC	SAMEA2072498	GCA_001127485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/485/GCA_001127485.2_ERL041834	-	ERL041834
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7821	52.1	chromosome 1:NZ_LT904777.1/LT904777.1	-	1	4966	4552	8/4/17	8/17/17	Complete Genome	SC	SAMEA2072503	GCA_001135805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/805/GCA_001135805.2_ERL072973	-	ERL072973
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.63614	52.1	chromosome 1:NZ_LT905088.1/LT905088.1	-	1	4830	4427	8/4/17	8/17/17	Complete Genome	SC	SAMEA2072494	GCA_001148125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/125/GCA_001148125.2_ERL024120	-	ERL024120
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.84307	52.1	chromosome 1:NZ_LT904868.1/LT904868.1	-	1	5064	4645	8/4/17	8/17/17	Complete Genome	SC	SAMEA2072794	GCA_001163025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/025/GCA_001163025.2_H12ESR04734-001A	-	H12ESR04734-001A
Geobacillus stearothermophilus	1422	PRJNA282772	282772	Terrabacteria group	Firmicutes	2.97096	52.2	-	LDNU01	398	3308	2683	7/21/15	4/3/17	Scaffold	Massey University	SAMN03651170	GCA_001183885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/885/GCA_001183885.1_ASM118388v1	26472822	D1
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.78102	52.1	chromosome 1:NZ_LT904875.1/LT904875.1	-	1	4970	4555	8/4/17	8/17/17	Complete Genome	SC	SAMEA2072495	GCA_001165785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/785/GCA_001165785.2_ERL024919	-	ERL024919
Photobacterium damselae subsp. piscicida DI21	1200302	PRJNA168653	168653	Proteobacteria	Gammaproteobacteria	4.83827	42.1516	plasmid pPHDP60:NC_020277.1/KC344732.1; plasmid pPHDP70:NZ_KP100338.1/KP100338.1	AKYG01	56	3807	3204	10/1/12	8/16/17	Scaffold	University of Santiago de Compostela	SAMN02471934	GCA_000300355.4	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/355/GCA_000300355.4_ASM30035v4	-	DI21
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.80779	52.1	chromosome 1:NZ_LT904893.1/LT904893.1	-	1	5012	4586	8/4/17	8/17/17	Complete Genome	SC	SAMEA1903846	GCA_001356455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/455/GCA_001356455.2_1016889	-	1016889
Faecalibacterium cf. prausnitzii KLE1255	748224	PRJNA46809	46809	Terrabacteria group	Firmicutes	2.92873	56.3	-	AECU01	139	2907	2699	10/26/10	4/10/17	Scaffold	Washington University Genome Center	SAMN00189147	GCA_000166035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/035/GCA_000166035.1_ASM16603v1	-	KLE1255
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.78344	52.1	chromosome 1:NZ_LT905139.1/LT905139.1	-	1	4972	4549	8/4/17	8/17/17	Complete Genome	SC	SAMEA2058419	GCA_001360555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/555/GCA_001360555.2_2010_7898	-	2010-007898
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.83568	52.1	chromosome 1:NZ_LT904867.1/LT904867.1	-	1	5032	4603	8/4/17	8/17/17	Complete Genome	SC	SAMEA2072676	GCA_001362095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/095/GCA_001362095.2_034151_4	-	ERL034151
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.78772	52.1	chromosome 1:NZ_LT905142.1/LT905142.1	-	1	4989	4563	8/4/17	8/17/17	Complete Genome	SC	SAMEA2072793	GCA_001362195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/195/GCA_001362195.2_H12ESR00755-001A	-	H12ESR00755-001A
Saccharopolyspora erythraea D	1382595	PRJNA214030	214030	Terrabacteria group	Actinobacteria	7.96992	71.2	-	AVCN01	384	7243	6588	8/20/13	4/8/17	Contig	East China University Of Science And Technology	SAMN02299070	GCA_000448385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/385/GCA_000448385.1_454Scaffolds.fna	24051314	D
Corynebacterium pseudotuberculosis	1719	PRJNA256958	256958	Terrabacteria group	Actinobacteria	2.36881	52.1	chromosome:NZ_CP021982.1/CP021982.1	-	1	2189	2060	6/20/17	6/24/17	Complete Genome	Federal University of Para	SAMN05509285	GCA_001969165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/165/GCA_001969165.2_ASM196916v2	28125655	MB302
Halomonas sp. GT	1971364	PRJNA380028	380028	Proteobacteria	Gammaproteobacteria	4.15846	52.1	chromosome:NZ_CP020562.1/CP020562.1	-	1	3770	3643	4/10/17	4/13/17	Complete Genome	Nanjing Institute of Technology 	SAMN06626686	GCA_002082565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/565/GCA_002082565.1_ASM208256v1	-	GT
Methylobacterium radiotolerans	31998	PRJNA388148	388148	Proteobacteria	Alphaproteobacteria	7.38928	70.7	-	NKQS01	1724	6478	6135	7/19/17	7/21/17	Scaffold	University of Johannesburg	SAMN07171768	GCA_002221455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/455/GCA_002221455.1_ASM222145v1	-	MAMP 4754
Orientia tsutsugamushi str. Karp	1359185	PRJNA212440	212440	Proteobacteria	Alphaproteobacteria	1.45435	29.9	-	LANM01	145	1491	957	3/27/15	4/3/17	Contig	IGS	SAMN02692923	GCA_000964585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/585/GCA_000964585.1_ASM96458v1	-	Karp
Salmonella enterica subsp. enterica serovar Borreze str. SA20041063	1242089	PRJNA177206	177206	Proteobacteria	Gammaproteobacteria	4.77756	52.1	chromosome:NZ_CP019407.1/CP019407.1	-	1	4809	4553	1/30/17	3/2/17	Complete Genome	Laboratory for Foodnorne Zoonoses	SAMN04160805	GCA_001975345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/345/GCA_001975345.1_ASM197534v1	-	SA20041063
Salmonella enterica subsp. enterica serovar Albany str. ATCC 51960	1173798	PRJNA161323	161323	Proteobacteria	Gammaproteobacteria	4.80545	52.1	chromosome:NZ_CP019177.1/CP019177.1	-	1	4844	4553	1/17/17	3/2/17	Complete Genome	FDA	SAMN01823708	GCA_000487515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/515/GCA_000487515.2_ASM48751v2	24158624	ATCC 51960
Corynebacterium pseudotuberculosis	1719	PRJNA343017	343017	Terrabacteria group	Actinobacteria	2.36814	52.1	chromosome:NZ_CP017291.1/CP017291.1	-	1	2188	2008	12/27/16	4/6/17	Complete Genome	UFMG	SAMN05771874	GCA_001922265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/265/GCA_001922265.1_ASM192226v1	-	MEX30
Corynebacterium pseudotuberculosis	1719	PRJNA341961	341961	Terrabacteria group	Actinobacteria	2.36788	52.1	chromosome:NZ_CP017292.1/CP017292.1	-	1	2182	2058	12/27/16	4/6/17	Complete Genome	UFMG	SAMN05729795	GCA_001922285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/285/GCA_001922285.1_ASM192228v1	-	MEX31
Ureaplasma urealyticum serovar 4 str. ATCC 27816	550748	PRJNA19091	19091	Terrabacteria group	Tenericutes	0.835413	25.8	-	AAYO02	4	686	631	3/21/07	3/30/17	Contig	TIGR	SAMN02435864	GCA_000169555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/555/GCA_000169555.1_ASM16955v1	-	ATCC 27816
Salmonella enterica subsp. enterica serovar Newport str. Levine 1	930778	PRJNA60529	60529	Proteobacteria	Gammaproteobacteria	4.84192	52.1	chromosome:NZ_CP015923.1/CP015923.1	-	1	4935	4622	12/6/16	3/2/17	Complete Genome	FDA	SAMN05172397	GCA_000271885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/885/GCA_000271885.2_ASM27188v2	-	Levine 1
Vibrio fischeri SR5	1088719	PRJNA73351	73351	Proteobacteria	Gammaproteobacteria	4.27361	38.3996	chromosome I:NZ_CM001400.1/CM001400.1; chromosome II:NZ_CM001401.1/CM001401.1	AHIH01	63	3893	3736	1/6/12	5/19/17	Chromosome	Northwestern University	SAMN02470712	GCA_000241785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/785/GCA_000241785.1_ASM24178v1	22374964	SR5
Corynebacterium pseudotuberculosis	1719	PRJNA340871	340871	Terrabacteria group	Actinobacteria	2.37028	52.1	chromosome:NZ_CP017384.1/CP017384.1	-	1	2172	2026	12/5/16	4/6/17	Complete Genome	UFMG	SAMN05714673	GCA_001889145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/145/GCA_001889145.1_ASM188914v1	-	I37
Corynebacterium pseudotuberculosis	1719	PRJNA317381	317381	Terrabacteria group	Actinobacteria	2.40345	52.1	chromosome:NZ_CP015192.1/CP015192.1	-	1	2226	2076	11/7/16	4/5/17	Complete Genome	Federal University of Minas Gerais	SAMN04606555	GCA_001866985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/985/GCA_001866985.1_ASM186698v1	-	34
Corynebacterium pseudotuberculosis	1719	PRJNA317378	317378	Terrabacteria group	Actinobacteria	2.40353	52.1	chromosome:NZ_CP015183.1/CP015183.1	-	1	2226	2071	11/7/16	4/5/17	Complete Genome	Federal University of Minas Gerais	SAMN04606552	GCA_001867005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/005/GCA_001867005.1_ASM186700v1	-	32
Burkholderia oklahomensis EO147	441163	PRJNA19537	19537	Proteobacteria	Betaproteobacteria	7.04716	66.9	-	ABBF01	886	6917	5940	6/6/07	5/18/17	Contig	NMRC	SAMN02470667	GCA_000170355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/355/GCA_000170355.1_ASM17035v1	-	EO147
Corynebacterium pseudotuberculosis	1719	PRJNA317379	317379	Terrabacteria group	Actinobacteria	2.40355	52.1	chromosome:NZ_CP015184.1/CP015184.1	-	1	2227	2068	11/7/16	4/5/17	Complete Genome	Federal University of Minas Gerais	SAMN04606554	GCA_001867025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/025/GCA_001867025.1_ASM186702v1	-	33
Corynebacterium pseudotuberculosis	1719	PRJNA317382	317382	Terrabacteria group	Actinobacteria	2.4035	52.1	chromosome:NZ_CP015185.1/CP015185.1	-	1	2229	2073	11/7/16	4/5/17	Complete Genome	Federal University of Minas Gerais	SAMN04606556	GCA_001867045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/045/GCA_001867045.1_ASM186704v1	-	35
Corynebacterium pseudotuberculosis	1719	PRJNA317383	317383	Terrabacteria group	Actinobacteria	2.40341	52.1	chromosome:NZ_CP015186.1/CP015186.1	-	1	2223	2065	11/7/16	4/5/17	Complete Genome	Federal University of Minas Gerais	SAMN04606557	GCA_001867065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/065/GCA_001867065.1_ASM186706v1	-	36
Treponema pallidum subsp. pertenue str. SamoaD	491078	PRJNA30671	30671	Spirochaetes	Spirochaetia	1.13933	52.8	chromosome:NC_016842.1/CP002374.1	-	1	1064	1005	2/6/12	3/30/17	Chromosome	Baylor College of Medecine	SAMN00000317	GCA_000246755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/755/GCA_000246755.1_ASM24675v1	22292095	SamoaD
Rhizobium leguminosarum	384	PRJNA247566	247566	Proteobacteria	Alphaproteobacteria	6.51806	60.2	-	JQJS01	80	6461	6008	8/28/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02787143	GCA_000745655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/655/GCA_000745655.1_ASM74565v1	-	OV483
Ochrobactrum anthropi CTS-325	1151114	PRJNA85133	85133	Proteobacteria	Alphaproteobacteria	4.72698	56	-	AIII01	15	4515	4350	3/7/12	5/19/17	Scaffold	"Fujian Institute of Research on the Structure of Matter, CAS"	SAMN02469799	GCA_000251205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/205/GCA_000251205.1_ASM25120v1	20131597	CTS-325
Corynebacterium pseudotuberculosis	1719	PRJNA317384	317384	Terrabacteria group	Actinobacteria	2.40352	52.1	chromosome:NZ_CP015187.1/CP015187.1	-	1	2225	2065	11/7/16	4/5/17	Complete Genome	Federal University of Minas Gerais	SAMN04606559	GCA_001867085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/085/GCA_001867085.1_ASM186708v1	-	38
Corynebacterium pseudotuberculosis	1719	PRJNA317385	317385	Terrabacteria group	Actinobacteria	2.40358	52.1	chromosome:NZ_CP015188.1/CP015188.1	-	1	2223	2069	11/7/16	4/5/17	Complete Genome	Federal University of Minas Gerais	SAMN04606560	GCA_001867105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/105/GCA_001867105.1_ASM186710v1	-	39
Corynebacterium pseudotuberculosis	1719	PRJNA317386	317386	Terrabacteria group	Actinobacteria	2.36508	52.1	chromosome:NZ_CP015189.1/CP015189.1	-	1	2181	2033	11/7/16	4/5/17	Complete Genome	Federal University of Minas Gerais	SAMN04606561	GCA_001867125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/125/GCA_001867125.1_ASM186712v1	-	43
Mycobacterium marinum	1781	PRJNA323684	323684	Terrabacteria group	Actinobacteria	6.25453	65.7	-	LYXC01	127	5481	5218	8/11/17	8/16/17	Scaffold	Chinese Academy of Fishery Sciences	SAMN05185376	GCA_002249865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/865/GCA_002249865.1_ASM224986v1	-	HL1506
Corynebacterium pseudotuberculosis	1719	PRJNA317387	317387	Terrabacteria group	Actinobacteria	2.36657	52.1	chromosome:NZ_CP015190.1/CP015190.1	-	1	2178	2030	11/7/16	4/5/17	Complete Genome	Federal University of Minas Gerais	SAMN04606562	GCA_001867145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/145/GCA_001867145.1_ASM186714v1	-	46
Corynebacterium pseudotuberculosis	1719	PRJNA317388	317388	Terrabacteria group	Actinobacteria	2.4033	52.1	chromosome:NZ_CP015191.1/CP015191.1	-	1	2224	2069	11/7/16	4/5/17	Complete Genome	Federal University of Minas Gerais	SAMN04606603	GCA_001867165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/165/GCA_001867165.1_ASM186716v1	-	48
Corynebacterium pseudotuberculosis	1719	PRJNA256958	256958	Terrabacteria group	Actinobacteria	2.3709	52.1	chromosome:NZ_CP016829.1/CP016829.1	-	1	2194	1903	8/11/16	4/21/17	Complete Genome	Federal University of Para	SAMN02944861	GCA_000764045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/045/GCA_000764045.2_ASM76404v2	25395628	MB20
Prosthecochloris sp. CIB 2401	1868325	PRJNA326504	326504	FCB group	Bacteroidetes/Chlorobi group	2.39985	52.1	chromosome:NZ_CP016432.1/CP016432.1	-	1	2241	2133	7/18/16	4/13/17	Complete Genome	Leibniz Institute DSMZ	SAMN05282066	GCA_001687065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/065/GCA_001687065.1_ASM168706v1	-	CIB 2401
Salmonella enterica subsp. enterica serovar Agona str. 392869-2	1072590	PRJNA71289	71289	Proteobacteria	Gammaproteobacteria	4.79853	52.1	chromosome:NZ_CP015024.1/CP015024.1	-	1	4838	4574	4/6/16	3/1/17	Complete Genome	FDA	SAMN02415169	GCA_000494385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/385/GCA_000494385.2_ASM49438v2	-	392869-2
Methanobrevibacter smithii DSM 2375	483214	PRJNA27821	27821	Euryarchaeota	Methanobacteria	1.71325	31.4	-	ABYW01	9	1693	1607	10/30/08	3/30/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008835	GCA_000151245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/151/245/GCA_000151245.1_ASM15124v1	-	DSM 2375
Bifidobacterium dentium ATCC 27679	871562	PRJNA51373	51373	Terrabacteria group	Actinobacteria	2.64578	58.4	-	AEEQ01	10	2289	2210	8/25/10	3/30/17	Scaffold	Baylor College of Medicine	SAMN00210789	GCA_000146775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/146/775/GCA_000146775.1_ASM14677v1	-	ATCC 27679
Corynebacterium pseudotuberculosis	1719	PRJNA256958	256958	Terrabacteria group	Actinobacteria	2.36342	52.1	chromosome:NZ_CP013260.1/CP013260.1	-	1	2188	1928	3/3/16	4/10/17	Complete Genome	Federal University of Para	SAMN04260963	GCA_001579825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/825/GCA_001579825.1_ASM157982v1	-	MB11
Corynebacterium pseudotuberculosis	1719	PRJNA256958	256958	Terrabacteria group	Actinobacteria	2.37076	52.1	chromosome:NZ_CP013261.1/CP013261.1	-	1	2193	1967	3/3/16	4/5/17	Complete Genome	Federal University of Para	SAMN04260964	GCA_001579865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/865/GCA_001579865.1_ASM157986v1	-	MB14
Corynebacterium pseudotuberculosis	1719	PRJNA256958	256958	Terrabacteria group	Actinobacteria	2.3681	52.1	-	-	1	2188	2027	3/3/16	9/19/17	Complete Genome	Federal University of Para	SAMN04260965	GCA_001579885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/885/GCA_001579885.2_ASM157988v2	-	MB30
Corynebacterium pseudotuberculosis	1719	PRJNA256958	256958	Terrabacteria group	Actinobacteria	2.3722	52.1	chromosome:NZ_CP013263.1/CP013263.1	-	1	2193	1963	3/3/16	4/5/17	Complete Genome	Federal University of Para	SAMN04260966	GCA_001579925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/925/GCA_001579925.1_ASM157992v1	-	MB66
Corynebacterium pseudotuberculosis	1719	PRJNA271886	271886	Terrabacteria group	Actinobacteria	2.36796	52.1	chromosome:NZ_CP012136.1/CP012136.1	-	1	2183	2037	7/24/15	4/3/17	Complete Genome	Universidade Federal do Para	SAMN03278402	GCA_001186445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/445/GCA_001186445.1_ASM118644v1	26607893	E19
Corynebacterium pseudotuberculosis	1719	PRJNA271872	271872	Terrabacteria group	Actinobacteria	2.36112	52.1	chromosome:NZ_CP012022.2/CP012022.2	-	1	2162	2034	7/7/15	6/14/17	Complete Genome	Universidade Federal do Para	SAMN03278295	GCA_001047215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/215/GCA_001047215.2_ASM104721v2	27013052	262
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA282346	282346	Proteobacteria	Gammaproteobacteria	4.75937	52.1	chromosome:NZ_CP011365.1/CP011365.1	-	1	4831	4520	5/7/15	2/27/17	Complete Genome	Korea Research Institute of Bioscience and Biotechnology	SAMN03568791	GCA_000993725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/725/GCA_000993725.1_ASM99372v1	-	FORC_015
Salmonella enterica subsp. enterica serovar Agona str. 460004 2-1	1124917	PRJNA78433	78433	Proteobacteria	Gammaproteobacteria	4.79717	52.1	chromosome:NZ_CP011259.1/CP011259.1	-	1	4838	4580	4/15/15	2/27/17	Complete Genome	FDA	SAMN02415150	GCA_000484195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/195/GCA_000484195.2_ASM48419v2	26139714	460004 2-1
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJNA261865	261865	Proteobacteria	Gammaproteobacteria	4.61237	52.1	chromosome:NZ_CP009559.1/CP009559.1	-	1	4731	4326	1/14/15	2/27/17	Complete Genome	Beijing Institute of Biotechnology	SAMN03076563	GCA_000818115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/115/GCA_000818115.1_ASM81811v1	-	CMCC 50503
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA256209	256209	Proteobacteria	Gammaproteobacteria	4.67126	52.1	chromosome:NZ_CP009091.1/CP009091.1	-	1	4762	4456	9/9/14	2/27/17	Complete Genome	Canadian Food Inspection Agency	SAMN02941165	GCA_000750295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/295/GCA_000750295.1_ASM75029v1	25156331	OLF-SE9-10012
Streptomyces clavuligerus ATCC 27064	443255	PRJNA42475	42475	Terrabacteria group	Actinobacteria	8.55689	72.4264	chromosome:NZ_CM000913.1/CM000913.1; plasmid pSCL4:NZ_CM000914.1/CM000914.1	ADGD01	2	7233	6938	4/1/10	5/19/17	Chromosome	University of Groningen	SAMN02471788	GCA_000163875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/875/GCA_000163875.1_Strep_clav_ATCC27064	20624727	ATCC 27064
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110353	1243618	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.71045	52.1	chromosome:CP007251.1	-	1	4572	3934	4/2/14	4/28/14	Complete Genome	LFZ	SAMN02384170	GCA_000626315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/315/GCA_000626315.1_ASM62631v1	-	EC20110353
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120916	1412570	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.80799	52.1	chromosome:NZ_CP007332.1/CP007332.1	-	1	5022	4566	4/1/14	2/26/17	Complete Genome	LFZ	SAMN02384291	GCA_000624155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/155/GCA_000624155.1_ASM62415v1	24786953	EC20120916
Salmonella enterica subsp. enterica serovar Agona str. 24249	1406860	PRJNA222376	222376	Proteobacteria	Gammaproteobacteria	4.76284	52.1	chromosome:NC_022991.1/CP006876.1	-	1	4793	4539	12/4/13	2/26/17	Complete Genome	University College Dublin	SAMN02641385	GCA_000503845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/845/GCA_000503845.1_ASM50384v1	24459278	24249
Yersinia frederiksenii ATCC 33641	349966	PRJNA16106	16106	Proteobacteria	Gammaproteobacteria	4.88534	46.9	-	AALE02	161	4490	4214	10/19/05	5/19/17	Contig	Naval Medical Research Center	SAMN00005353	GCA_000168015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/015/GCA_000168015.1_ASM16801v1	-	ATCC 33641
Yersinia kristensenii ATCC 33638	527012	PRJNA29757	29757	Proteobacteria	Gammaproteobacteria	5.04239	47.4	-	ACCA01	153	4662	4300	6/1/09	5/19/17	Contig	Naval Medical Research Center	SAMN00005357	GCA_000173715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/715/GCA_000173715.1_ASM17371v1	-	ATCC 33638
Salmonella enterica subsp. enterica serovar Pullorum str. S06004	1298917	PRJNA191133	191133	Proteobacteria	Gammaproteobacteria	4.6826	52.1	chromosome:CP006575.1	-	1	4465	4052	8/6/13	1/31/14	Complete Genome	"Jiangsu Key Laboratory of Zoonosis, Yangzhou University"	SAMN02603462	GCA_000444445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/445/GCA_000444445.1_ASM44444v1	-	S06004
Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1	877468	PRJNA51643	51643	Proteobacteria	Gammaproteobacteria	4.91596	52.1	chromosome:NC_021902.1/CP006631.1	-	1	5058	4806	7/31/13	2/26/17	Complete Genome	USMARC-ARS-USDA	SAMN02297856	GCA_000442415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/415/GCA_000442415.1_ASM44241v1	-	USMARC-S3124.1
Micrococcus luteus SK58	596312	PRJNA34071	34071	Terrabacteria group	Actinobacteria	2.62269	72.7	-	ADCD01	112	2487	2290	2/24/10	3/30/17	Contig	J. Craig Venter Institute	SAMN00008343	GCA_000176875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/875/GCA_000176875.1_ASM17687v1	-	SK58
Corynebacterium pseudotuberculosis 258	1168865	PRJNA157069	157069	Terrabacteria group	Actinobacteria	2.36982	52.1	chromosome:NC_017945.2/CP003540.2	-	1	2189	2034	5/22/12	4/3/17	Complete Genome	Rede Paraense de Genômica e Proteômica	SAMN02603745	GCA_000263755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/755/GCA_000263755.2_ASM26375v2	23201561	258
Helicobacter pullorum	35818	PRJNA326805	326805	Proteobacteria	delta/epsilon subdivisions	1.85651	34.1	-	MANJ01	123	1864	1735	8/4/16	4/5/17	Contig	University of Hyderabad	SAMN05292897	GCA_001698595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/595/GCA_001698595.1_ASM169859v1	-	NAP13B35
Corynebacterium pseudotuberculosis 31	1087451	PRJNA73223	73223	Terrabacteria group	Actinobacteria	2.40296	52.1	chromosome:NC_017730.3/CP003421.3	-	1	2221	2097	4/18/12	4/5/17	Complete Genome	Rede Paraense de Genomica e Proteomica	SAMN02603749	GCA_000259155.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/155/GCA_000259155.3_ASM25915v3	23144408	31
Corynebacterium pseudotuberculosis 316	1074485	PRJNA71591	71591	Terrabacteria group	Actinobacteria	2.31041	52.1	chromosome:NC_016932.1/CP003077.1	-	1	2121	1919	2/22/12	3/30/17	Complete Genome	Rede Paraense de Genomica e Proteomica	SAMN02603747	GCA_000248375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/375/GCA_000248375.1_ASM24837v1	23144380	316
Corynebacterium pseudotuberculosis CIP 52.97	935697	PRJNA61117	61117	Terrabacteria group	Actinobacteria	2.36939	52.1	chromosome:NC_017307.2/CP003061.2	-	1	2190	2045	10/6/11	5/31/17	Complete Genome	Rede Paraense de Genômica e Proteômica	SAMN02603742	GCA_000227605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/605/GCA_000227605.2_ASM22760v2	22123771	CIP 52.97
Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7	1016998	PRJNA27803	27803	Proteobacteria	Gammaproteobacteria	4.85889	52.1	chromosome:NC_010102.1/CP000886.1	-	1	4960	4694	11/30/07	2/26/17	Complete Genome	The Salmonella enterica serovar Paratyphi B Genome Sequencing Project	SAMN02603951	GCA_000018705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/705/GCA_000018705.1_ASM1870v1	-	SGSC4150; SPB7
Salmonella enterica subsp. enterica serovar Typhi str. Ty2	209261	PRJNA371	371	Proteobacteria	Gammaproteobacteria	4.79196	52.1	chromosome:NC_004631.1/AE014613.1	-	1	4969	4604	3/21/03	2/26/17	Complete Genome	Univ. Wisconsin	SAMN02604095	GCA_000007545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/545/GCA_000007545.1_ASM754v1	12644504	Ty2
Salmonella enterica subsp. enterica serovar Choleraesuis str. ATCC 10708	938142	PRJNA61355	61355	Proteobacteria	Gammaproteobacteria	4.94344	52.0988	chromosome:NZ_CP012344.1/CP012344.1; plasmid pCFSAN000679_01:NZ_CP012345.1/CP012345.1	-	2	5054	4735	8/12/15	2/28/17	Complete Genome	FDA	SAMN01823712	GCA_000487295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/295/GCA_000487295.2_ASM48729v2	26798102	ATCC 10708
Mycobacterium leprae 7935681	1297124	PRJNA316192	316192	Terrabacteria group	Actinobacteria	3.26656	57.8	-	LVXE01	107	2982	2124	5/18/16	4/12/17	Scaffold	Eurofins Genomics India Pvt ltd 	SAMN04578110	GCA_001648835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/835/GCA_001648835.1_ASM164883v1	-	7935681
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.02012	52.0985	chromosome:CP022070.1; plasmid unnamed1:CP022071.1; plasmid unnamed2:CP022072.1	-	3	5201	4664	6/27/17	6/27/17	Complete Genome	US Food and Drug Administration 	SAMN06173334	GCA_002209225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/225/GCA_002209225.1_ASM220922v1	-	FDAARGOS_321
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA305824	305824	Proteobacteria	Gammaproteobacteria	4.89344	52.0975	chromosome:NZ_CP016581.1/CP016581.1; plasmid pSH14-009_2:NZ_CP016582.1/CP016582.1; plasmid pSH14-009_37:NZ_CP016583.1/CP016583.1; plasmid pSH14-009_6:NZ_CP016584.1/CP016584.1; plasmid pSH14-009_99:NZ_CP016585.1/CP016585.1	-	5	5021	4769	7/22/16	3/1/17	Complete Genome	Laboratoire de sante publique du Quebec	SAMN04334653	GCA_001692655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/655/GCA_001692655.1_ASM169265v1	-	SH14-009
Vibrio splendidus 12F01	530557	PRJNA81899	81899	Proteobacteria	Gammaproteobacteria	5.8107	44.1	-	AIDS01	87	5138	4937	3/26/12	5/19/17	Contig	Massachusetts Institute of Technology	SAMN02470437	GCA_000256485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/485/GCA_000256485.1_Vsplend_12F01_1.0	22491847	12F01
Salmonella enterica subsp. enterica serovar Enteritidis str. 77-1427	926034	PRJNA60069	60069	Proteobacteria	Gammaproteobacteria	4.71868	52.0968	chromosome:NZ_CP007598.1/CP007598.1; plasmid pCFSAN000111_01:NZ_CP007599.1/CP007599.1	-	2	4813	4546	5/6/14	2/26/17	Complete Genome	FDA	SAMN01041143	GCA_000280315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/315/GCA_000280315.2_ASM28031v2	23045502	77-1427
Brucella ceti M13/05/1	520460	PRJNA33043	33043	Proteobacteria	Alphaproteobacteria	3.33723	57.1	-	ACBP01	22	3352	3110	1/23/09	3/30/17	Scaffold	Broad Institute	SAMN02595284	GCA_000157855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/855/GCA_000157855.1_ASM15785v1	-	M13/05/1
Enterococcus casseliflavus EC10	565654	PRJNA32931	32931	Terrabacteria group	Firmicutes	3.45163	42.6	-	ACAL01	18	3385	3256	6/12/09	3/30/17	Scaffold	Broad Institute	SAMN02595257	GCA_000157295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/295/GCA_000157295.1_ASM15729v1	-	EC10
Enterococcus gallinarum EG2	565653	PRJNA32927	32927	Terrabacteria group	Firmicutes	3.16232	40.7	-	ACAJ01	14	3025	2913	5/20/09	4/7/17	Scaffold	Broad Institute	SAMN02595255	GCA_000157255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/255/GCA_000157255.1_ASM15725v1	-	EG2
Caulobacter vibrioides	155892	PRJNA302274	302274	Proteobacteria	Alphaproteobacteria	5.32218	69.4	-	LNIY01	160	4794	4663	11/30/15	4/11/17	Contig	University of Copenhagen	SAMN04271141	GCA_001449105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/105/GCA_001449105.1_ASM144910v1	26868402	T5M6
Salmonella enterica	28901	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.94405	52.0877	chromosome:NZ_CP022069.1/CP022069.1; plasmid unnamed1:NZ_CP022066.1/CP022066.1; plasmid unnamed2:NZ_CP022067.1/CP022067.1; plasmid unnamed3:NZ_CP022068.1/CP022068.1	-	4	5090	4700	6/27/17	6/29/17	Complete Genome	US Food and Drug Administration 	SAMN06173326	GCA_002209205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/205/GCA_002209205.1_ASM220920v1	-	FDAARGOS_313
Brucella pinnipedialis M163/99/10	520463	PRJNA33037	33037	Proteobacteria	Alphaproteobacteria	3.40405	56.8	-	ACBM01	89	3422	2995	1/23/09	4/10/17	Scaffold	Broad Institute	SAMN02595281	GCA_000157795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/795/GCA_000157795.1_ASM15779v1	-	M163/99/10
Dickeya dadantii subsp. dieffenbachiae NCPPB 2976	1223574	PRJNA172911	172911	Proteobacteria	Gammaproteobacteria	4.81753	56.4055	chromosome:NZ_CM001978.1/CM001978.1	AOOG01	14	4369	4111	6/4/13	4/8/17	Chromosome	James Hutton Institute	SAMN02470106	GCA_000406185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/185/GCA_000406185.1_DDA2976_1.0	24265502	NCPPB 2976
Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898	1454638	PRJNA236707	236707	Proteobacteria	Gammaproteobacteria	5.01008	52.0825	chromosome:NZ_CP014971.2/CP014971.2; plasmid pSTY1-1898:NZ_CP014972.2/CP014972.2; plasmid pSTY2-1898:NZ_CP014973.1/CP014973.1; plasmid pSTY3-1898:NZ_CP014974.1/CP014974.1	-	4	5127	4876	4/19/16	3/6/17	Complete Genome	USDA-ARS-USMARC	SAMN02716871	GCA_001623765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/765/GCA_001623765.2_ASM162376v2	-	USDA-ARS-USMARC-1898
[Clostridium] spiroforme	29348	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.70304	28.9	-	NFKY01	141	2532	2366	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473626	GCA_002160645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/645/GCA_002160645.1_ASM216064v1	-	An158
[Eubacterium] siraeum	39492	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.86357	45.4	-	CZBY01	47	2688	2533	10/1/15	4/11/17	Contig	SC	SAMEA3545391	GCA_001404415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/415/GCA_001404415.1_14207_7_51	-	2789STDY5834928
Anaerotruncus colihominis	169435	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.44073	54.6	-	NFJJ01	24	3412	3283	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473683	GCA_002159815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/815/GCA_002159815.1_ASM215981v1	-	An251
Intestinibacter bartlettii DSM 16795	445973	PRJEB19575	376358	Terrabacteria group	Firmicutes	2.93863	28.6	-	FUXV01	19	2689	2617	3/4/17	3/10/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745147	GCA_900167285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/285/GCA_900167285.1_IMG-taxon_2585428074_annotated_assembly	-	DSM 16795
Clostridium sporogenes ATCC 15579	471871	PRJNA20549	20549	Terrabacteria group	Firmicutes	4.10233	28	-	ABKW02	2	3849	3630	3/7/08	3/30/17	Scaffold	Washington University Genome Sequencing Center	SAMN00000018	GCA_000155085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/085/GCA_000155085.1_ASM15508v1	-	ATCC 15579
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB21155	388909	Proteobacteria	Gammaproteobacteria	4.81294	52.0817	chromosome 1:NZ_LT882486.1/LT882486.1; plasmid 2:NZ_LT882487.1/LT882487.1	-	2	5016	4568	6/3/17	8/21/17	Complete Genome	WTSI	SAMEA104109193	GCA_900185485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/485/GCA_900185485.1_BL60006	-	BL60006
Bacteroides intestinalis	329854	PRJEB8298	276428	FCB group	Bacteroidetes/Chlorobi group	5.84997	43.4	-	CDQQ01	1778	4722	3682	2/24/15	4/10/17	Contig	CGS-GL	SAMEA3217993	GCA_000940235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/235/GCA_000940235.1_2e7A_assembly	-	2e7A
Coprococcus comes	410072	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.3395	42.5	-	CYXR01	68	3264	3070	10/1/15	4/11/17	Contig	SC	SAMEA3545425	GCA_001404815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/815/GCA_001404815.1_14207_7_85	-	2789STDY5834962
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA298211	298211	Proteobacteria	Gammaproteobacteria	4.88537	52.0784	chromosome:NZ_CP016530.1/CP016530.1; plasmid pSA01AB09084001_37:NZ_CP016531.1/CP016531.1; plasmid pSA01AB09084001_4:NZ_CP016532.1/CP016532.1; plasmid pSA01AB09084001_92:NZ_CP016533.1/CP016533.1	-	4	5006	4746	7/21/16	3/1/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN05263504	GCA_001690095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/095/GCA_001690095.1_ASM169009v1	-	SA01AB09084001
[Ruminococcus] torques	33039	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.00415	42	-	CYZO01	82	2781	2622	10/1/15	4/4/17	Contig	SC	SAMEA3545307	GCA_001405315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/315/GCA_001405315.1_13470_2_60	-	2789STDY5834841
Blautia obeum	40520	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.35701	41.6	-	CYZD01	46	3167	3013	10/1/15	4/4/17	Contig	SC	SAMEA3545245	GCA_001404535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/535/GCA_001404535.1_13414_6_21	-	2789STDY5608837
Streptococcus infantarius subsp. infantarius ATCC BAA-102	471872	PRJNA20527	20527	Terrabacteria group	Firmicutes	1.92519	37.6	-	ABJK02	21	1967	1765	1/30/08	4/7/17	Scaffold	Washington University Genome Sequencing Center	SAMN00000017	GCA_000154985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/985/GCA_000154985.1_ASM15498v1	-	ATCC BAA-102
Parvimonas micra A293	1408286	PRJNA222594	222594	Terrabacteria group	Firmicutes	1.68079	28.4	-	AXUQ01	49	1592	1498	10/28/13	4/9/17	Scaffold	University of Malaya	SAMN02471847	GCA_000493795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/795/GCA_000493795.1_PM_A293	24309744	A293
Actinomyces odontolyticus	1660	PRJNA298751	298751	Terrabacteria group	Actinobacteria	2.33612	65.9	-	LLVT01	5	2048	1958	12/8/15	4/11/17	Scaffold	University of Washington	SAMN04166493	GCA_001462375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/375/GCA_001462375.1_ASM146237v1	26847892	XH001
Salmonella enterica subsp. enterica serovar Stanleyville str. CFSAN000624	1194159	PRJNA167396	167396	Proteobacteria	Gammaproteobacteria	5.10298	52.0761	chromosome:NZ_CP017723.1/CP017723.1; plasmid pSARB26_01:NZ_CP017724.1/CP017724.1; plasmid pSARB26_02:NZ_CP017725.1/CP017725.1; plasmid pSARB26_03:NZ_CP017726.1/CP017726.1	-	4	5249	4810	10/27/16	3/2/17	Complete Genome	FDA	SAMN01823707	GCA_000487935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/935/GCA_000487935.2_ASM48793v2	24158624	SARB61
Ruminococcus gnavus ATCC 29149	411470	PRJNA18179	18179	Terrabacteria group	Firmicutes	3.50191	42.9	-	AAYG02	43	3498	3309	3/21/07	4/7/17	Contig	Washington University Genome Sequencing Center	SAMN00627102	GCA_000169475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/475/GCA_000169475.1_ASM16947v1	-	ATCC 29149
[Clostridium] symbiosum ATCC 14940	411472	PRJNA18183	18183	Terrabacteria group	Firmicutes	4.82367	47.6	-	AWSU01	270	4430	4183	9/12/13	4/9/17	Scaffold	Washington University Genome Sequencing Center	SAMN00627068	GCA_000466485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/485/GCA_000466485.1_ASM46648v1	-	ATCC 14940
Dorea longicatena	88431	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.03315	41.5	-	CYYM01	51	2929	2769	10/1/15	4/4/17	Contig	SC	SAMEA3545259	GCA_001404635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/635/GCA_001404635.1_13414_6_35	-	2789STDY5608851
Desulfovibrio piger	901	PRJNA321218	321218	Proteobacteria	delta/epsilon subdivisions	2.5636	63.7	-	MNTW01	62	2213	2064	12/23/16	12/23/16	Scaffold	None	SAMN05717306	GCA_001917195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/195/GCA_001917195.1_ASM191719v1	27819664	-
Bacteroides caccae ATCC 43185	411901	PRJNA18163	18163	FCB group	Bacteroidetes/Chlorobi group	4.56481	41.9	-	AAVM02	21	3743	3525	1/3/07	5/18/17	Contig	Washington University Genome Sequencing Center	SAMN00627055	GCA_000169015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/015/GCA_000169015.1_ASM16901v1	-	ATCC 43185
Bacteroides ovatus ATCC 8483	411476	PRJNA18191	18191	FCB group	Bacteroidetes/Chlorobi group	6.46537	41.9	-	AAXF02	32	5010	4769	3/2/07	5/18/17	Scaffold	Washington University Genome Sequencing Center	SAMN00627058	GCA_000154125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/125/GCA_000154125.1_ASM15412v1	-	ATCC 8483
[Clostridium] bolteae ATCC BAA-613	411902	PRJNA18165	18165	Terrabacteria group	Firmicutes	6.55799	49.1	-	ABCC02	68	6134	5888	7/13/07	5/18/17	Scaffold	Washington University Genome Sequencing Center	SAMN00627070	GCA_000154365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/365/GCA_000154365.1_ASM15436v1	-	ATCC BAA-613
Collinsella aerofaciens	74426	PRJEB10915	297013	Terrabacteria group	Actinobacteria	2.2348	59.6	-	CYYP01	43	1938	1827	10/1/15	4/11/17	Contig	SC	SAMEA3545232	GCA_001405375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/375/GCA_001405375.1_13414_6_7	-	2789STDY5608823
Parabacteroides merdae CL09T00C40	999421	PRJNA64893	64893	FCB group	Bacteroidetes/Chlorobi group	4.45874	45.3	-	AJPU01	11	3770	3535	10/19/12	6/12/17	Scaffold	Broad Institute	SAMN02463942	GCA_000307495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/495/GCA_000307495.1_Para_merd_CL09T00C40_V1	-	CL09T00C40
Bacteroides uniformis CL03T00C23	997889	PRJNA64833	64833	FCB group	Bacteroidetes/Chlorobi group	4.95894	46.3	-	AGXX01	8	4252	4070	6/25/12	5/18/17	Scaffold	Broad Institute	SAMN02463932	GCA_000273785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/785/GCA_000273785.1_Bact_unif_CL03T00C23_V1	-	CL03T00C23
Treponema denticola H-22	999432	PRJNA64915	64915	Spirochaetes	Spirochaetia	2.75786	37.9501	chromosome:NZ_CM001795.1/CM001795.1	AGDV01	1	5206	5023	2/7/13	4/1/17	Chromosome	Broad Institute	SAMN02596721	GCA_000340645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/645/GCA_000340645.1_Trep_dent_H-22_V1	-	H-22
Xylella fastidiosa subsp. sandyi Ann-1	155920	PRJNA179546	179546	Proteobacteria	Gammaproteobacteria	2.78091	52.0717	chromosome:NZ_CP006696.1/CP006696.1; plasmid unnamed1:NZ_CP006697.1/CP006697.1	-	2	2734	2442	6/6/14	4/2/17	Complete Genome	University of California	SAMN03081476	GCA_000698805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/805/GCA_000698805.1_ASM69880v1	-	Ann-1
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA298211	298211	Proteobacteria	Gammaproteobacteria	4.89199	52.0709	chromosome:NZ_CP016521.1/CP016521.1; plasmid pSA02DT09004001_101:NZ_CP016522.1/CP016522.1; plasmid pSA02DT09004001_2:NZ_CP016523.1/CP016523.1; plasmid pSA02DT09004001_37:NZ_CP016524.1/CP016524.1	-	4	5008	4744	7/21/16	3/1/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN05263513	GCA_001690115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/115/GCA_001690115.1_ASM169011v1	-	SA02DT09004001
Mesorhizobium loti	381	PRJDB4891	338439	Proteobacteria	Alphaproteobacteria	8.45215	62.5602	chromosome:AP017605.1; plasmid plasmid_1:AP017606.1; plasmid plasmid_2:AP017607.1; plasmid plasmid_3:AP017608.1	-	4	8212	8148	8/9/16	8/9/16	Chromosome	"Division of Plant and Microbial Sciences, National Agriculture and Food Research Organization"	SAMD00055564	GCA_002356515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/515/GCA_002356515.1_MlotiTONO_1.0	-	TONO
Coprococcus eutactus	33043	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.08829	43.8	-	CYXU01	15	2719	2615	10/1/15	4/11/17	Contig	SC	SAMEA3545426	GCA_001404675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/675/GCA_001404675.1_14207_7_86	-	2789STDY5834963
Bacteroides stercoris	46506	PRJEB16546	349845	FCB group	Bacteroidetes/Chlorobi group	3.90789	45.9	-	FNOD01	71	3333	3184	10/22/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444283	GCA_900106605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/605/GCA_900106605.1_IMG-taxon_2693429855_annotated_assembly	-	DSM 19555
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA298211	298211	Proteobacteria	Gammaproteobacteria	4.99246	52.0698	chromosome:NZ_CP012924.1/CP012924.1; plasmid p12-4374_2:NZ_CP012925.1/CP012925.1; plasmid p12-4374_3:NZ_CP012927.1/CP012927.1; plasmid p12-4374_37:NZ_CP012926.1/CP012926.1; plasmid p12-4374_62:NZ_CP012928.1/CP012928.1; plasmid p12-4374_96:NZ_CP012929.1/CP012929.1	-	6	5143	4882	11/9/15	3/1/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN04156727	GCA_001441225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/225/GCA_001441225.1_ASM144122v1	26769926	Dec-74
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA298211	298211	Proteobacteria	Gammaproteobacteria	4.89069	52.0697	chromosome:NZ_CP016569.1/CP016569.1; plasmid pAMR588-04-00320_2:NZ_CP016570.1/CP016570.1; plasmid pAMR588-04-00320_37:NZ_CP016571.1/CP016571.1; plasmid pAMR588-04-00320_99:NZ_CP016572.1/CP016572.1	-	4	5008	4750	7/22/16	3/1/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN05263515	GCA_001692575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/575/GCA_001692575.1_ASM169257v1	-	AMR588-04-00320
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA298211	298211	Proteobacteria	Gammaproteobacteria	4.8904	52.0697	chromosome:NZ_CP016565.1/CP016565.1; plasmid pAMR588-04-00318_2:NZ_CP016566.1/CP016566.1; plasmid pAMR588-04-00318_37:NZ_CP016567.1/CP016567.1; plasmid pAMR588-04-00318_99:NZ_CP016568.1/CP016568.1	-	4	5010	4752	7/22/16	3/1/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN05263514	GCA_001692595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/595/GCA_001692595.1_ASM169259v1	-	AMR588-04-00318
Salmonella enterica subsp. enterica serovar Heidelberg str. SL476	454169	PRJNA20045	20045	Proteobacteria	Gammaproteobacteria	4.98351	52.069	chromosome:NC_011083.1/CP001120.1; plasmid pSL476_3:NC_011082.1/CP001119.1; plasmid pSL476_91:NC_011081.1/CP001118.1	-	3	5114	4848	7/24/08	2/26/17	Complete Genome	TIGR/J. Craig Venter Institute	SAMN02604067	GCA_000020705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/705/GCA_000020705.1_ASM2070v1	21602358	SL476
Rickettsia conorii subsp. caspia A-167	140892	PRJNA156941	156941	Proteobacteria	Alphaproteobacteria	1.26033	32.5	-	AJUR01	25	1555	1189	5/4/12	4/11/17	Contig	URMITE CNRS UMR 6236 IRD 198	SAMN02471338	GCA_000261325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/325/GCA_000261325.1_RcoCa1.0	22887666	A-167
Methylococcus capsulatus str. Texas = ATCC 19069	1224744	PRJNA173038	173038	Proteobacteria	Gammaproteobacteria	3.25971	63.4	-	AMCE01	114	3029	2912	9/17/12	4/8/17	Contig	Norwegian University of Life Sciences	SAMN02470718	GCA_000297615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/615/GCA_000297615.1_ASM29761v1	23144383	Texas
Nitrosomonas europaea	915	PRJEB17031	351199	Proteobacteria	Betaproteobacteria	2.70096	50.7	-	FOID01	89	2594	2448	10/29/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216309	GCA_900111725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/725/GCA_900111725.1_IMG-taxon_2671180133_annotated_assembly	-	Nm35
Acidithiobacillus ferrooxidans	920	PRJNA294114	294114	Proteobacteria	Acidithiobacillia	3.11122	58.6	-	LJBT01	96	3189	2956	10/28/15	7/3/17	Scaffold	Heilongjiang Bayi Agricultural University	SAMN04015057	GCA_001418795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/795/GCA_001418795.1_ASM141879v1	26697394	YQH-1
Ruminococcus albus 8	246199	PRJNA62	62	Terrabacteria group	Firmicutes	4.05216	46.6	-	ADKM02	136	3703	3504	3/25/10	3/30/17	Contig	TIGR	SAMN02436640	GCA_000178155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/155/GCA_000178155.2_ASM17815v2	-	8
Deinococcus radiodurans DSM 20539	1121384	PRJNA234829	234829	Terrabacteria group	Deinococcus-Thermus	3.24181	66.8	-	JMLF01	63	3287	3028	5/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743363	GCA_000685985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/985/GCA_000685985.1_ASM68598v1	-	DSM 20539
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA298211	298211	Proteobacteria	Gammaproteobacteria	4.88814	52.0686	chromosome:NZ_CP016514.1/CP016514.1; plasmid p11-004736-1-7_37:NZ_CP016515.1/CP016515.1; plasmid p11-004736-1-7_99:NZ_CP016516.1/CP016516.1	-	3	5004	4749	7/21/16	3/1/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN05263553	GCA_001690055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/055/GCA_001690055.1_ASM169005v1	-	11-004736-1-7
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA298211	298211	Proteobacteria	Gammaproteobacteria	4.888	52.0686	chromosome:NZ_CP016517.1/CP016517.1; plasmid pCE-R2-11-0435_37:NZ_CP016518.1/CP016518.1; plasmid pCE-R2-11-0435_6:NZ_CP016519.1/CP016519.1; plasmid pCE-R2-11-0435_92:NZ_CP016520.1/CP016520.1	-	4	5009	4754	7/21/16	3/1/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN05263538	GCA_001690075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/075/GCA_001690075.1_ASM169007v1	-	CE-R2-11-0435
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA298211	298211	Proteobacteria	Gammaproteobacteria	4.88816	52.0686	chromosome:NZ_CP012921.1/CP012921.1; plasmid pSA02DT10168701_37:NZ_CP012922.1/CP012922.1; plasmid pSA02DT10168701_99:NZ_CP012923.1/CP012923.1	-	3	5003	4745	11/9/15	3/1/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN04156749	GCA_001441205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/205/GCA_001441205.1_ASM144120v1	26769926	SA02DT10168701
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.90255	52.0674	chromosome 1:NZ_LT904852.1/LT904852.1; plasmid 2:NZ_LT904853.1/LT904853.1	-	2	5137	4701	8/4/17	8/17/17	Complete Genome	SC	SAMEA2059020	GCA_001361075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/075/GCA_001361075.2_Ty585	-	TY585
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.91435	52.0674	chromosome 1:NZ_LT904894.1/LT904894.1; plasmid 2:NZ_LT904895.1/LT904895.1	-	2	5148	4703	8/4/17	8/17/17	Complete Genome	SC	SAMEA2072792	GCA_001362175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/175/GCA_001362175.2_ERL12960	-	ERL12960
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.91541	52.0674	chromosome 1:NZ_LT883153.1/LT883153.1; plasmid 2:NZ_LT883154.1/LT883154.1	-	2	5163	4735	6/9/17	6/21/17	Complete Genome	SC	SAMEA2072789	GCA_001157245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/245/GCA_001157245.2_ERL12148	-	ERL12148
Listeria innocua ATCC 33091	1002366	PRJNA65129	65129	Terrabacteria group	Firmicutes	2.89212	37.4	-	AGCN01	17	2942	2844	1/5/12	6/15/17	Scaffold	Washington University Genome Center	SAMN02299452	GCA_000241405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/405/GCA_000241405.1_ASM24140v1	-	ATCC 33091
Thermobifida fusca NBRC 14071 = JCM 3263	1223522	PRJDB447	173166	Terrabacteria group	Actinobacteria	3.6439	67.5	-	BCWB01	82	3186	3043	2/27/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046774	GCA_001592045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/045/GCA_001592045.1_ASM159204v1	-	NBRC 14071
Salmonella enterica subsp. enterica serovar Inverness str. ATCC 10720	941187	PRJNA61429	61429	Proteobacteria	Gammaproteobacteria	4.98988	52.0652	chromosome:NZ_CP019181.1/CP019181.1; plasmid pATCC10720:NZ_CP019182.1/CP019182.1	-	2	5128	4808	1/17/17	3/2/17	Complete Genome	FDA	SAMN01823716	GCA_000487155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/155/GCA_000487155.2_ASM48715v2	24158624	ATCC 10720
Archaeoglobus fulgidus	2234	PRJEB12806	343370	Euryarchaeota	Archaeoglobi	2.03682	48.7	-	FJNF01	206	2372	2213	9/21/16	5/31/17	Contig	NTNU	SAMEA3879005	GCA_900069765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/069/765/GCA_900069765.1_ASM90006976v1	-	-
Salmonella enterica subsp. enterica	59201	PRJNA380521	380521	Proteobacteria	Gammaproteobacteria	5.0647	52.0611	chromosome:NZ_CP020922.1/CP020922.1; plasmid unnamed1:NZ_CP020923.1/CP020923.1; plasmid unnamed2:NZ_CP020924.1/CP020924.1	-	3	5245	4865	6/2/17	6/5/17	Complete Genome	National Institute of Environmental Research	SAMN06646159	GCA_002163995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/995/GCA_002163995.1_ASM216399v1	-	16A242
Streptomyces avermitilis MA-4680 = NBRC 14893	227882	PRJNA277389	277389	Terrabacteria group	Actinobacteria	10.4683	70.6	-	JZJK01	90	9245	8560	4/2/15	3/11/17	Scaffold	"National Institute of Advanced Industrial Science and Technology, AIST"	SAMN03390037	GCA_000968255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/255/GCA_000968255.1_ASM96825v1	-	MA-4680
Salmonella enterica subsp. enterica serovar Senftenberg	28150	PRJEB6403	251923	Proteobacteria	Gammaproteobacteria	4.76309	52.0542	chromosome 1:NZ_LN868943.1/LN868943.1; plasmid 2:NZ_LN868944.1/LN868944.1; plasmid 3:NZ_LN868945.1/LN868945.1; plasmid 4:NZ_LN868946.1/LN868946.1	-	4	4790	4536	7/8/15	3/1/17	Complete Genome	SC	SAMEA2517359	GCA_001457675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/675/GCA_001457675.1_NCTC10384	-	NCTC10384
Geobacillus sp. 12AMOR1	1629723	PRJNA277925	277925	Terrabacteria group	Firmicutes	3.44272	52.0525	chromosome:CP011832.1; plasmid pGARCT:CP011833.1	-	2	3511	3357	6/15/15	3/2/16	Complete Genome	Centre for Geobiology	SAMN03400067	GCA_001028085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/085/GCA_001028085.1_ASM102808v1	-	12AMOR1
Cupriavidus metallidurans	119219	PRJNA217716	217716	Proteobacteria	Betaproteobacteria	6.51462	63.7	-	JFZD01	238	6092	5885	6/16/14	4/2/17	Contig	Belgian Nuclear Research Center (SCK-CEN)	SAMN02644837	GCA_000709025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/025/GCA_000709025.1_assembly_v1_of_C._metallidurans_NA1	25059868	NA1
Geobacter sulfurreducens	35554	PRJNA270810	270810	Proteobacteria	delta/epsilon subdivisions	4.56614	60.2	chromosome:NZ_CP010430.1/CP010430.1	-	1	4204	4039	3/24/15	4/10/17	Chromosome	Centre for Genomic Regulation	SAMN03268940	GCA_000961035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/035/GCA_000961035.1_ASM96103v1	-	AM-1
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.75992	52.0495	chromosome 1:NZ_LT904872.1/LT904872.1; plasmid 2:NZ_LT904873.1/LT904873.1; plasmid 3:NZ_LT904874.1/LT904874.1	-	3	4950	4503	8/4/17	8/17/17	Complete Genome	SC	SAMEA2072788	GCA_001362135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/135/GCA_001362135.2_11909_3	-	ERL11909
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA327740	327740	Proteobacteria	Gammaproteobacteria	5.17249	52.0451	chromosome:NZ_CP016385.1/CP016385.1; plasmid p931-3904:NZ_CP016386.1/CP016386.1; plasmid p931IncI1:NZ_CP016387.1/CP016387.1; plasmid p931IncI2:NZ_CP016388.1/CP016388.1; plasmid pESBL931:NZ_CP016389.1/CP016389.1; plasmid pSLT931:NZ_CP016390.1/CP016390.1	-	6	5382	5114	9/16/16	3/1/17	Complete Genome	University of Colroado Anschutz Medical Campus	SAMN05356919	GCA_001729225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/225/GCA_001729225.1_ASM172922v1	-	ST931R
Colwellia psychrerythraea	28229	PRJNA258173	258173	Proteobacteria	Gammaproteobacteria	5.15485	38.1	-	JQED01	57	4441	4274	10/6/14	4/9/17	Contig	Oak Ridge National Lab	SAMN02989439	GCA_000764225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/225/GCA_000764225.1_ASM76422v1	-	ND2E
Salmonella enterica	28901	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.21325	52.0398	chromosome:CP022062.1; plasmid unnamed1:CP022060.1; plasmid unnamed2:CP022061.1; plasmid unnamed3:CP022063.1; plasmid unnamed4:CP022064.1; plasmid unnamed5:CP022065.1	-	6	5430	4839	6/27/17	6/27/17	Complete Genome	US Food and Drug Administration 	SAMN06173325	GCA_002208965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/965/GCA_002208965.1_ASM220896v1	-	FDAARGOS_312
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.87935	52.0162	chromosome 2:NZ_LT905090.1/LT905090.1; plasmid 1:NZ_LT905089.1/LT905089.1	-	2	5095	4668	8/4/17	8/17/17	Complete Genome	SC	SAMEA2149950	GCA_001364695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/695/GCA_001364695.2_Ty3_243	-	ty3-243
Salmonella enterica subsp. enterica serovar Agona str. SL483	454166	PRJNA20063	20063	Proteobacteria	Gammaproteobacteria	4.83664	52.0105	chromosome:NC_011149.1/CP001138.1; plasmid unnamed:NC_011148.1/CP001137.1	-	2	4895	4634	8/22/08	2/26/17	Complete Genome	TIGR/J. Craig Venter Institute	SAMN02604068	GCA_000020885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/885/GCA_000020885.1_ASM2088v1	21602358	SL483
Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643	1242107	PRJNA177326	177326	Proteobacteria	Gammaproteobacteria	5.26861	52.001	chromosome:NZ_CP022117.1/CP022117.1; plasmid unnamed1:NZ_CP022118.1/CP022118.1; plasmid unnamed2:NZ_CP022119.1/CP022119.1	-	3	5363	4921	6/30/17	7/3/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN04160825	GCA_002211585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/585/GCA_002211585.1_ASM221158v1	-	S-1643
Bacteroides thetaiotaomicron dnLKV9	1235785	PRJNA175974	175974	FCB group	Bacteroidetes/Chlorobi group	6.23288	42.9	-	ASSM01	6	4839	4637	5/29/13	4/2/17	Scaffold	Broad Institute	SAMN01730983	GCA_000403155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/155/GCA_000403155.2_Bact_thet_dnLKV9_V1	-	dnLKV9
Streptococcus uberis S6261	1450183	PRJNA234018	234018	Terrabacteria group	Firmicutes	1.86825	36.5	-	JATH01	26	1898	1800	4/22/15	4/3/17	Contig	University of Nottingham	SAMN02570391	GCA_000975325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/975/325/GCA_000975325.1_ASM97532v1	25898893	S6261
Bartonella quintana JK 73rel	1402977	PRJNA221535	221535	Proteobacteria	Alphaproteobacteria	1.60031	38.9	-	AZZW01	2	1397	1202	1/8/14	4/10/17	Scaffold	Broad Institute	SAMN02364136	GCA_000516775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/775/GCA_000516775.1_Bart_quin_JK_73rel_V1	-	JK 73rel
Rhodobacter capsulatus	1061	PRJNA298689	298689	Proteobacteria	Alphaproteobacteria	3.60757	66.5	-	LLVV01	70	3411	3257	10/22/15	4/4/17	Scaffold	"Istanbul Technical University, Institute of Science"	SAMN04166236	GCA_001402725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/725/GCA_001402725.1_ASM140272v1	27284151	A52
Clostridium tetani ATCC 9441	1172203	PRJNA260193	260193	Terrabacteria group	Firmicutes	2.80014	28.5	-	JRGH01	28	2723	2627	10/2/14	4/2/17	Scaffold	"FDA, Center for Biologics Evaluation and Research"	SAMN03018574	GCA_000762315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/315/GCA_000762315.1_ASM76231v1	-	ATCC 9441
Pectobacterium carotovorum	554	PRJNA345001	345001	Proteobacteria	Gammaproteobacteria	5.00842	52	chromosome:NZ_CP017482.1/CP017482.1	-	1	4508	4300	9/8/17	9/11/17	Complete Genome	NIBIO	SAMN05853907	GCA_002288545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/545/GCA_002288545.1_ASM228854v1	-	SK-992-20-13
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.79605	52	chromosome 1:NZ_LT904854.1/LT904854.1	-	1	4994	4580	8/4/17	8/17/17	Complete Genome	SC	SAMEA2156512	GCA_001048375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/375/GCA_001048375.2_M223	-	M223
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.77149	52	chromosome 1:NZ_LT904871.1/LT904871.1	-	1	4955	4534	8/4/17	8/17/17	Complete Genome	SC	SAMEA2056951	GCA_001079465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/465/GCA_001079465.2_STyphi_1553_1	-	1553
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.78615	52	chromosome 1:NZ_LT904869.1/LT904869.1	-	1	4986	4555	8/4/17	8/17/17	Complete Genome	SC	SAMEA2072679	GCA_001088345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/345/GCA_001088345.2_052042_2	-	ERL052042
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.76555	52	chromosome 1:NZ_LT904881.1/LT904881.1	-	1	4954	4542	8/4/17	8/17/17	Complete Genome	SC	SAMEA2067822	GCA_001106745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/745/GCA_001106745.2_UI_2120	-	UI2120
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7934	52	chromosome 1:NZ_LT905140.1/LT905140.1	-	1	4992	4582	8/4/17	8/17/17	Complete Genome	SC	SAMEA2072647	GCA_001148305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/305/GCA_001148305.2_ERL082356	-	ERL082356
Rhodopirellula baltica SH28	993517	PRJNA174069	174069	PVC group	Planctomycetes	7.14969	55.5	-	AMCW01	178	5862	5600	10/9/12	5/19/17	Contig	Microbial Interactions in MArine Systems (MIMAS)	SAMN02261078	GCA_000304635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/635/GCA_000304635.1_ASM30463v1	23273849	SH28
Lawsonia intracellularis	29546	PRJNA362671	362671	Proteobacteria	delta/epsilon subdivisions	1.69297	32.9	-	MTPJ01	33	1455	1378	1/31/17	4/17/17	Contig	University of Minnesota	SAMN06244899	GCA_001975945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/945/GCA_001975945.1_ASM197594v1	-	E40504
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.77228	52	chromosome 1:NZ_LT904886.1/LT904886.1	-	1	4963	4560	8/4/17	8/17/17	Complete Genome	SC	SAMEA2072934	GCA_001362335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/335/GCA_001362335.2_Ty2	-	SGB82
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB5919	258621	Proteobacteria	Gammaproteobacteria	4.76564	52	chromosome 1:NZ_LT905064.1/LT905064.1	-	1	4956	4495	8/4/17	8/17/17	Complete Genome	SC	SAMEA3109638	GCA_900205255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/205/255/GCA_900205255.1_1554	-	-
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB5919	258621	Proteobacteria	Gammaproteobacteria	4.7952	52	chromosome 1:NZ_LT905063.1/LT905063.1	-	1	4988	4526	8/4/17	8/17/17	Complete Genome	SC	SAMEA2564024	GCA_900205265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/205/265/GCA_900205265.1_lupe_GEN0059_5	-	-
Salmonella enterica subsp. salamae serovar 57:z29:z42	1710356	PRJNA294448	294448	Proteobacteria	Gammaproteobacteria	4.71938	52	chromosome:NZ_CP022467.1/CP022467.1	-	1	4697	4394	7/27/17	8/12/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN04160816	GCA_002234475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/234/475/GCA_002234475.1_ASM223447v1	-	ST114
Chromobacterium violaceum	536	PRJNA275561	275561	Proteobacteria	Betaproteobacteria	4.8596	64.6	-	JYGI01	98	4403	4244	3/13/15	4/3/17	Contig	University of Malaya	SAMN03349749	GCA_000952105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/105/GCA_000952105.1_ASM95210v1	-	L_1B5_1
Brevibacterium linens	1703	PRJNA268212	268212	Terrabacteria group	Actinobacteria	3.84645	64.2	-	JTJZ01	29	3452	3351	12/29/14	4/10/17	Contig	Oak Ridge National Lab	SAMN03216776	GCA_000807915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/915/GCA_000807915.1_Brevibacterium_linens_AE038-8_v1.0	25883298	AE038-8
Salmonella enterica subsp. enterica serovar Waycross	58101	PRJNA316728	316728	Proteobacteria	Gammaproteobacteria	4.81289	52	chromosome:NZ_CP022138.1/CP022138.1	-	1	4897	4629	6/30/17	7/3/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN04160804	GCA_002211845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/845/GCA_002211845.1_ASM221184v1	-	SA20041608
Myxococcus xanthus DZF1	1198538	PRJNA168421	168421	Proteobacteria	delta/epsilon subdivisions	9.2806	68.9	-	AOBT01	75	7545	7315	2/13/13	5/19/17	Contig	University of Iowa	SAMN02471832	GCA_000340515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/515/GCA_000340515.1_Myxococcus_xanthus_DZF1	23788552	DZF1
Prosthecochloris sp. HL-130-GSB	1974213	PRJNA383462	383462	FCB group	Bacteroidetes/Chlorobi group	2.41473	52	chromosome:NZ_CP020873.1/CP020873.1	-	1	2302	2005	4/27/17	5/3/17	Complete Genome	The Pennsylvania State University	SAMN06619775	GCA_002113825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/825/GCA_002113825.1_ASM211382v1	-	HL-130-GSB
Citrobacter braakii	57706	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.24406	52	chromosome:NZ_CP020448.1/CP020448.1	-	1	5032	4696	3/29/17	4/1/17	Complete Genome	US Food and Drug Administration 	SAMN04875579	GCA_002073755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/755/GCA_002073755.1_ASM207375v1	-	FDAARGOS_253
Staphylococcus haemolyticus R1P1	1134914	PRJNA81443	81443	Terrabacteria group	Firmicutes	2.3954	32.7	-	AJVA01	77	2349	2223	5/7/12	3/23/17	Contig	University of Arizona	SAMN02471548	GCA_000261465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/465/GCA_000261465.1_ASM26146v1	-	R1P1
Photorhabdus luminescens BA1	1393736	PRJNA217861	217861	Proteobacteria	Gammaproteobacteria	5.00459	42.5	-	JFGV01	114	4323	4006	4/2/14	4/11/17	Contig	University of New Hampshire	SAMN02338763	GCA_000612035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/035/GCA_000612035.1_P_lum_BA1_v1	24786955	BA1
Phycisphaerae bacterium ST-NAGAB-D1	1936003	PRJNA369385	369385	PVC group	Planctomycetes	4.25097	52	chromosome:CP019791.1	-	1	3555	3493	2/28/17	2/28/17	Complete Genome	Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures	SAMN06284947	GCA_002007645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/645/GCA_002007645.1_ASM200764v1	-	ST-NAGAB-D1
Brucella ovis 81/8	1169232	PRJNA173539	173539	Proteobacteria	Alphaproteobacteria	3.30045	57.2	-	AQKO01	24	3419	3035	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN00839736	GCA_000370905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/905/GCA_000370905.1_Bruc_ovis_81_8_V1	-	81/8
Rickettsia sibirica subsp. mongolitimonae HA-91	1144280	PRJNA82787	82787	Proteobacteria	Alphaproteobacteria	1.25234	32.4	-	AHZB01	21	1521	1201	2/14/12	4/11/17	Contig	URMITE CNRS UMR 6236 IRD 198	SAMN02471337	GCA_000247625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/625/GCA_000247625.2_ASM24762v2	22493199	HA-91
Crocosphaera watsonii WH 8502	423474	PRJEB1314	218983	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.68305	37.6	-	CAQK01	869	4734	3862	9/11/13	4/10/17	Contig	UCSC	SAMEA3146263	GCA_001039555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/555/GCA_001039555.1_WH8502_v1	-	WH 8502
Salmonella enterica subsp. enterica serovar Krefeld str. SA20030536	1242106	PRJNA177321	177321	Proteobacteria	Gammaproteobacteria	4.94227	52	chromosome:NZ_CP019413.1/CP019413.1	-	1	5006	4726	1/30/17	3/2/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN04160800	GCA_001975445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/445/GCA_001975445.1_ASM197544v1	-	SA20030536
Pectobacterium carotovorum	554	PRJNA344960	344960	Proteobacteria	Gammaproteobacteria	4.82682	52	chromosome:NZ_CP017481.1/CP017481.1	-	1	4357	4115	12/15/16	9/18/17	Complete Genome	NIBIO	SAMN05853691	GCA_002307355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/355/GCA_002307355.1_ASM230735v1	-	Polaris
Salmonella enterica subsp. enterica serovar Saintpaul str. SARA26	702982	PRJNA42913	42913	Proteobacteria	Gammaproteobacteria	4.68679	52	chromosome:NZ_CP017727.1/CP017727.1	-	1	4697	4424	10/27/16	3/2/17	Complete Genome	FDA	SAMN01805318	GCA_000486165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/165/GCA_000486165.2_ASM48616v2	24158624	SARA26
Candidatus Rhodoluna planktonica	535712	PRJNA317698	317698	Terrabacteria group	Actinobacteria	1.42451	52	chromosome:NZ_CP015208.1/CP015208.1	-	1	1390	1334	10/26/16	4/17/17	Complete Genome	Nagoya University	SAMN04623515	GCA_001854225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/225/GCA_001854225.1_ASM185422v1	27659506	MWH-Dar1
Plesiomonas shigelloides	703	PRJEB6403	251923	Proteobacteria	Gammaproteobacteria	3.40598	52	chromosome 1:NZ_LT575468.1/LT575468.1	-	1	3038	2871	6/16/16	4/12/17	Complete Genome	SC	SAMEA2665130	GCA_900087055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/055/GCA_900087055.1_31289_E01	-	NCTC10360
Geobacillus sp. JS12	1813182	PRJNA314835	314835	Terrabacteria group	Firmicutes	3.72149	52	chromosome:CP014749.1	-	1	3671	3070	3/15/16	3/15/16	Complete Genome	Korea Polar Research Institute	SAMN04544377	GCA_001592395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/395/GCA_001592395.1_ASM159239v1	-	JS12
Erwinia amylovora LA637	1407064	PRJEB4666	231574	Proteobacteria	Gammaproteobacteria	3.86955	53.6923	chromosome I:NZ_CBVU010000001.1/CBVU010000001.1; chromosome II:NZ_CBVU010000002.1/CBVU010000002.1; chromosome III:NZ_CBVU010000003.1/CBVU010000003.1; chromosome IV:NZ_CBVU010000004.1/CBVU010000004.1; chromosome V:NZ_CBVU010000005.1/CBVU010000005.1; chromosome VI:NZ_CBVU010000006.1/CBVU010000006.1; chromosome VII:NZ_CBVU010000007.1/CBVU010000007.1; chromosome VIII:NZ_CBVU010000008.1/CBVU010000008.1; plasmid IX:NC_023056.1/HG793098.1; plasmid X:NC_023072.1/HG793099.1	CBVU01	10	3653	3499	12/12/13	4/2/17	Chromosome	CeBiTec	SAMEA3138841	GCA_000513355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/355/GCA_000513355.1_EA_LA637	-	LA637
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJNA286155	286155	Proteobacteria	Gammaproteobacteria	4.79355	52	chromosome:NZ_CP012091.1/CP012091.1	-	1	4979	4610	9/29/15	2/28/17	Complete Genome	Universiti Sains Malaysia	SAMN03765654	GCA_001302605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/605/GCA_001302605.1_ASM130260v1	26564032	PM016/13
Campylobacter upsaliensis JV21	888826	PRJNA53193	53193	Proteobacteria	delta/epsilon subdivisions	1.64915	35	-	AEPU01	14	1704	1601	12/27/10	4/7/17	Scaffold	Baylor College of Medicine	SAMN00216973	GCA_000185345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/345/GCA_000185345.1_ASM18534v1	-	JV21
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJNA286162	286162	Proteobacteria	Gammaproteobacteria	4.79899	52	chromosome:CP012151.1	-	1	4745	4352	9/29/15	11/24/15	Complete Genome	Universiti Sains Malaysia	SAMN03765689	GCA_001302625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/625/GCA_001302625.1_ASM130262v1	-	B/SF/13/03/195
Streptomyces scabiei	1930	PRJNA255690	255690	Terrabacteria group	Actinobacteria	10.0103	71.5	-	JPPW01	74	8780	8261	8/8/14	3/11/17	Scaffold	University of Exeter	SAMN02927996	GCA_000738715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/715/GCA_000738715.1_ASM73871v1	-	NCPPB 4066
Salmonella enterica subsp. enterica serovar Typhi str. Ty21a	527001	PRJNA34855	34855	Proteobacteria	Gammaproteobacteria	4.79196	52	chromosome:NC_021176.1/CP002099.1	-	1	4970	4593	5/1/13	2/26/17	Complete Genome	"Division of Bacterial, Parasitic and Allergenic Products, LESTD, FDA-CBER, USA"	SAMN02603210	GCA_000385905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/905/GCA_000385905.1_ASM38590v1	23969054	Ty21a
Citrobacter koseri	545	PRJNA272112	272112	Proteobacteria	Gammaproteobacteria	4.81217	53.8	-	LRPS01	63	4688	4484	2/2/16	4/4/17	Scaffold	The Genome Institute at Washington University	SAMN03842474	GCA_001546305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/305/GCA_001546305.1_ASM154630v1	-	GED7778C
Thiobacillus denitrificans DSM 12475	1123392	PRJNA169731	169731	Proteobacteria	Betaproteobacteria	3.60995	62.7	-	AQWL01	38	3628	3450	4/20/13	6/20/17	Contig	DOE Joint Genome Institute	SAMN02441059	GCA_000376425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/425/GCA_000376425.1_ASM37642v1	-	DSM 12475
Nocardia farcinica NBRC 15532	1210076	PRJDB163	171038	Terrabacteria group	Actinobacteria	6.37825	70.7	-	BDBJ01	194	6103	5779	4/1/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00018768	GCA_001612925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/925/GCA_001612925.1_ASM161292v1	-	NBRC 15532
[Eubacterium] eligens	39485	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.23742	38	-	CZBV01	47	3149	2974	10/1/15	4/11/17	Contig	SC	SAMEA3545343	GCA_001405395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/395/GCA_001405395.1_14207_7_1	-	2789STDY5834878
Corynebacterium pseudotuberculosis Cp162	1161911	PRJNA89445	89445	Terrabacteria group	Actinobacteria	2.36587	52	chromosome:NC_018019.2/CP003652.2	-	1	2176	2032	6/11/12	6/21/17	Complete Genome	Rede Paraense de Genômica e Proteômica	SAMN02603744	GCA_000265545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/545/GCA_000265545.2_ASM26554v2	23012291	Cp162
Cellvibrio japonicus Ueda107	498211	PRJNA28329	28329	Proteobacteria	Gammaproteobacteria	4.57657	52	chromosome:NC_010995.1/CP000934.1	-	1	3701	3604	6/19/08	5/18/17	Complete Genome	J. Craig Venter Institute	SAMN02603448	GCA_000019225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/225/GCA_000019225.1_ASM1922v1	18556790	Ueda107
Marinobacter hydrocarbonoclasticus	2743	PRJNA335531	335531	Proteobacteria	Gammaproteobacteria	4.21927	57	-	MPKY01	21	3886	3657	12/8/16	4/16/17	Scaffold	"South China Sea Institute of Oceanology, Chinese Academy of Sciences"	SAMN05447431	GCA_001895225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/225/GCA_001895225.1_ASM189522v1	-	STW2
Thermococcus kodakarensis KOD1	69014	PRJNA13213	13213	Euryarchaeota	Thermococci	2.08874	52	chromosome:NC_006624.1/AP006878.1	-	1	2328	2237	1/6/05	4/17/17	Complete Genome	"Kyoto University, Japan"	SAMD00061071	GCA_000009965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/965/GCA_000009965.1_ASM996v1	15710748	KOD1
Bacteroides vulgatus CL09T03C04	997891	PRJNA64837	64837	FCB group	Bacteroidetes/Chlorobi group	4.9165	41.9	-	AGXZ01	12	4185	3912	6/25/12	5/18/17	Scaffold	Broad Institute	SAMN02463934	GCA_000273295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/295/GCA_000273295.1_Bact_vulg_CL09T03C04_V1	-	CL09T03C04
Agrobacterium vitis	373	PRJNA328200	328200	Proteobacteria	Alphaproteobacteria	5.75646	57.6	-	MBEV01	40	5254	5063	10/12/16	4/5/17	Contig	Monash University Malaysia	SAMN05366360	GCA_001758275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/275/GCA_001758275.1_ASM175827v1	-	AB4
Xenorhabdus bovienii str. oregonense	1398202	PRJEB4323	255481	Proteobacteria	Gammaproteobacteria	4.1069	44.9	-	CBSX01	236	3866	3505	7/17/14	4/2/17	Scaffold	UWM	SAMEA3139088	GCA_000736535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/535/GCA_000736535.1_XBO_3527_PRJEB4323	-	oregonense
Geobacillus kaustophilus HTA426	235909	PRJNA13233	13233	Terrabacteria group	Firmicutes	3.59267	51.9947	chromosome:NC_006510.1/BA000043.1; plasmid pHTA426:NC_006509.1/AP006520.1	-	2	3700	3420	12/4/04	4/6/17	Complete Genome	JAMSTEC	SAMD00061072	GCA_000009785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/785/GCA_000009785.1_ASM978v1	15576355	HTA426
Xenorhabdus nematophila F1	1306162	PRJEB1529	200363	Proteobacteria	Gammaproteobacteria	4.24468	43.6	-	CAVM01	61	3917	3567	4/26/13	4/8/17	Scaffold	"INRA MONTPELLIER,FRANCE"	SAMEA2272801	GCA_000389595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/595/GCA_000389595.1_XENF1_2627_PRJEB1529	23788541	F1
Halorubrum lacusprofundi	2247	PRJNA343348	343348	Euryarchaeota	Halobacteria	3.63375	64.4	-	MKFG01	193	3563	3370	7/6/17	7/8/17	Contig	University of NSW	SAMN05822533	GCA_002215305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/305/GCA_002215305.1_ASM221530v1	-	DL18
Mycoplasma fermentans PG18	496833	PRJDA28473	28473	Terrabacteria group	Tenericutes	1.00401	26.9	chromosome:NC_021002.1/AP009608.1	-	1	919	820	6/3/09	4/7/17	Chromosome	M Bio Technology Incorporation	SAMD00060938	GCA_000209735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/209/735/GCA_000209735.1_ASM20973v1	19219498	PG18
Salmonella enterica subsp. enterica	59201	PRJNA271539	271539	Proteobacteria	Gammaproteobacteria	5.19037	51.9931	chromosome:NZ_CP011428.1/CP011428.1; plasmid pYU39_2.7:NZ_CP011435.1/CP011435.1; plasmid pYU39_4.2:NZ_CP011434.1/CP011434.1; plasmid pYU39_4.8:NZ_CP011433.1/CP011433.1; plasmid pYU39_5.1:NZ_CP011432.1/CP011432.1; plasmid pYU39_89:NZ_CP011430.1/CP011430.1; plasmid pYU39_IncA/C:NZ_CP011429.1/CP011429.1; plasmid pYU39_IncX:NZ_CP011431.1/CP011431.1	-	8	5386	5108	5/14/15	2/27/17	Complete Genome	Centro de Ciencias Genomicas - UNAM	SAMN03653812	GCA_001006525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/525/GCA_001006525.1_ASM100652v1	26089426	YU39
Citrobacter rodentium	67825	PRJNA261533	261533	Proteobacteria	Gammaproteobacteria	5.38581	54.5	-	JXUN01	361	5515	4859	2/10/15	4/10/17	Contig	Liberty University	SAMN03115005	GCA_000835925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/835/925/GCA_000835925.1_ASM83592v1	25953159	ATCC 51459
Listeria seeligeri	1640	PRJNA276413	276413	Terrabacteria group	Firmicutes	2.90063	37.3	-	JYOM01	19	2900	2803	4/17/15	2/27/17	Contig	University of Veterinary Medicine Vienna	SAMN03372569	GCA_000972985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/985/GCA_000972985.1_ASM97298v1	-	7KSM
Nodularia spumigena CENA596	1819295	PRJNA315832	315832	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.18968	41.2	-	LWAJ01	291	4565	4254	4/19/16	4/12/17	Contig	Center for Nuclear Energy in Agriculture - University of Sao Paulo	SAMN04570624	GCA_001623485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/485/GCA_001623485.1_ASM162348v1	27284148	CENA596
Arthrospira platensis C1	459495	PRJNA67617	67617	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.08921	44.7506	chromosome:NZ_CM001632.1/CM001632.1	AFXD01	1	11893	11091	9/24/12	4/8/17	Chromosome	"King Mongkut's University of Technology Thonburi, Thailand"	SAMN02470135	GCA_000307915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/915/GCA_000307915.1_ASM30791v1	22675597	C1
Neisseria lactamica ATCC 23970	546265	PRJNA244570	244570	Proteobacteria	Betaproteobacteria	2.18203	52.2	-	JOVI01	1	2290	2024	8/19/14	4/2/17	Scaffold	Los Alamos National Laboratory	SAMN02870721	GCA_000741965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/965/GCA_000741965.1_ASM74196v1	25291770	ATCC 23970
Edwardsiella ictaluri ATCC 33202	1027360	PRJNA66365	66365	Proteobacteria	Gammaproteobacteria	3.70369	57.6	-	AFJI01	117	3484	3162	5/31/12	4/7/17	Contig	"East China University of Science and Technology, China"	SAMN02469763	GCA_000264785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/785/GCA_000264785.1_ASM26478v1	22590641	ATCC 33202
Erythrobacter litoralis	39960	PRJNA245372	245372	Proteobacteria	Alphaproteobacteria	3.21387	65.2	-	JMIX01	22	3070	2970	6/27/14	4/9/17	Contig	Xiamen University	SAMN02737002	GCA_000714795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/795/GCA_000714795.1_Ery_DSM_8509_v1	25059862	DSM 8509
Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1735	1454585	PRJNA236656	236656	Proteobacteria	Gammaproteobacteria	4.94553	51.9794	chromosome:NZ_CP007584.2/CP007584.2; plasmid pSAN1-1735:NZ_CP014707.1/CP014707.1	-	2	5087	4821	5/6/15	3/3/17	Complete Genome	USDA-ARS-USMARC	SAMN02716852	GCA_000988525.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/525/GCA_000988525.3_ASM98852v3	-	USDA-ARS-USMARC-1735
Xylella fastidiosa MUL0034	1401256	PRJNA217686	217686	Proteobacteria	Gammaproteobacteria	2.66658	51.9726	chromosome:NZ_CP006740.1/CP006740.1; plasmid unnamed2:NZ_CP006739.1/CP006739.1	-	2	2575	2313	6/6/14	4/2/17	Complete Genome	LANL Genome Science Group	SAMN03081485	GCA_000698825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/825/GCA_000698825.1_ASM69882v1	-	MUL0034
Parabacteroides distasonis CL03T12C09	999416	PRJNA64883	64883	FCB group	Bacteroidetes/Chlorobi group	5.06328	45.1	-	AGZM01	5	4310	4097	10/19/12	6/12/17	Scaffold	Broad Institute	SAMN02463937	GCA_000307455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/455/GCA_000307455.1_Para_dist_CL03T12C09_V1	-	CL03T12C09
Photobacterium angustum	661	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.77209	39.7	-	JZSN01	105	4285	3935	3/10/15	4/3/17	Contig	FDA/CFSAN	SAMN03295482	GCA_000950015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/015/GCA_000950015.1_CFSAN029434_01.0	-	ATCC 33977
Clostridium ljungdahlii DSM 13528	748727	PRJNA280340	280340	Terrabacteria group	Firmicutes	4.57262	31	-	LITS01	56	4274	4066	5/4/16	4/12/17	Scaffold	Cornell University	SAMN03459581	GCA_001636855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/855/GCA_001636855.1_ASM163685v1	26331212	PETC
Leeuwenhoekiella blandensis	360293	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.78227	39.2	-	DCSP01	116	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454079	GCA_002325685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/685/GCA_002325685.1_ASM232568v1	28894102	-
Mariprofundus ferrooxydans	314344	PRJNA292582	292582	Proteobacteria	Zetaproteobacteria	2.85286	54	-	LIGC01	47	2785	2693	8/21/15	4/10/17	Contig	Western Washington University	SAMN03981821	GCA_001273615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/615/GCA_001273615.1_ASM127361v1	26450720	JV-1
Bacillus weihenstephanensis NBRC 101238 = DSM 11821	1220585	PRJDB404	172603	Terrabacteria group	Firmicutes	5.57163	35.2	-	BAUY01	100	5779	5369	12/28/13	4/2/17	Contig	National Institute of Technology and Evaluation	SAMD00041791	GCA_000513155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/155/GCA_000513155.1_ASM51315v1	-	NBRC 101238
Xylella fastidiosa subsp. pauca	698414	PRJNA383475	383475	Proteobacteria	Gammaproteobacteria	2.54374	51.9667	chromosome:NZ_CP020870.1/CP020870.1; plasmid pXF-De_Donno:NZ_CP020871.1/CP020871.1	-	2	2420	2136	5/4/17	5/10/17	Complete Genome	POnTE (Pest Organisms Threatening Europe)	SAMN06765826	GCA_002117875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/875/GCA_002117875.1_ASM211787v1	-	De Donno
Rhodococcus jostii	132919	PRJEB16364	349279	Terrabacteria group	Actinobacteria	9.91298	66.9	-	FNTL01	6	9052	8473	10/22/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04490220	GCA_900105375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/375/GCA_900105375.1_IMG-taxon_2642422554_annotated_assembly	-	DSM 44719
Rickettsia felis str. Pedreira	1359196	PRJNA212445	212445	Proteobacteria	Alphaproteobacteria	1.48519	32.5	-	LANQ01	1	1594	1270	3/27/15	4/10/17	Contig	IGS	SAMN02666435	GCA_000964665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/665/GCA_000964665.1_ASM96466v1	-	Pedreira
Nitrosospira multiformis	1231	PRJEB16654	349909	Proteobacteria	Betaproteobacteria	3.2134	54	-	FNQL01	38	2976	2820	10/22/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216411	GCA_900107715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/715/GCA_900107715.1_IMG-taxon_2671180074_annotated_assembly	-	Nl4
Streptococcus sanguinis SK353	888815	PRJNA53171	53171	Terrabacteria group	Firmicutes	2.30108	43.4	-	AEWY01	3	2296	2195	3/1/11	3/30/17	Scaffold	Baylor College of Medicine	SAMN00253310	GCA_000191085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/085/GCA_000191085.1_ASM19108v1	-	SK353
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA401082	401082	Proteobacteria	Gammaproteobacteria	5.04643	51.9634	chromosome:NZ_CP023166.1/CP023166.1; plasmid pSGB23:NZ_CP023167.1/CP023167.1	-	2	5161	4848	9/12/17	9/14/17	Complete Genome	Nanyang Technological University	SAMN07594151	GCA_002290205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/205/GCA_002290205.1_ASM229020v1	-	SGB23
Salmonella enterica subsp. enterica serovar Muenster str. 0315	1124958	PRJNA78397	78397	Proteobacteria	Gammaproteobacteria	4.97282	51.9579	chromosome:NZ_CP019198.1/CP019198.1; plasmid pCFSAN001297_01:NZ_CP019200.1/CP019200.1; plasmid pCFSAN001297_02:NZ_CP019199.1/CP019199.1	-	3	5142	4872	1/17/17	3/2/17	Complete Genome	FDA	SAMN01805332	GCA_000487035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/035/GCA_000487035.2_ASM48703v2	24158624	315
Salmonella enterica	28901	PRJNA320977	320977	Proteobacteria	Gammaproteobacteria	5.00183	51.953	chromosome:NZ_CP015724.1/CP015724.1; plasmid unnamed1:NZ_CP015725.1/CP015725.1	-	2	5129	4773	5/19/16	3/1/17	Complete Genome	China National Center for Food Safety Risk Assessment	SAMN04961653	GCA_001647755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/755/GCA_001647755.1_ASM164775v1	-	C629
Nitrosomonas eutropha	916	PRJEB16565	349827	Proteobacteria	Betaproteobacteria	2.41861	48.1	-	FNNM01	66	2309	2119	10/22/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216317	GCA_900106875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/875/GCA_900106875.1_IMG-taxon_2671180081_annotated_assembly	-	Nm38
Croceibacter atlanticus	313588	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.90541	32.8	-	DGCL01	184	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452009	GCA_002384605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/605/GCA_002384605.1_ASM238460v1	28894102	-
Stigmatella aurantiaca	41	PRJEB16838	350971	Proteobacteria	delta/epsilon subdivisions	9.36577	69.1	-	FOAP01	61	7483	7187	10/29/16	4/14/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444354	GCA_900109545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/545/GCA_900109545.1_IMG-taxon_2693429895_annotated_assembly	-	DSM 17044
Desulfovibrio magneticus str. Maddingley MBC34	1206767	PRJNA169936	169936	Proteobacteria	delta/epsilon subdivisions	4.39152	65.7	-	ALAO01	489	3990	3940	10/24/12	9/26/13	Contig	Commonwealth Scientific and Industrial Research Organisation	SAMN01813472	GCA_000307955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/955/GCA_000307955.1_ASM30795v1	-	-
Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 43845	930772	PRJNA60517	60517	Proteobacteria	Gammaproteobacteria	5.26061	51.934	chromosome:CP019194.1; plasmid pATCC43845:CP019195.1	-	2	5398	4511	1/17/17	1/17/17	Complete Genome	FDA	SAMN01823733	GCA_000486525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/525/GCA_000486525.2_ASM48652v2	-	ATCC 43845
Leuconostoc gelidum subsp. gasicomitatum	115778	PRJEB12228	324804	Terrabacteria group	Firmicutes	2.08949	36.6	-	FBTB01	23	2103	1979	6/8/16	7/28/17	Scaffold	UNIVERSITY OF HELSINKI	SAMEA3718676	GCA_900016165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/165/GCA_900016165.1_ASM90001616v1	-	KSL4-2
Cupriavidus taiwanensis STM 6018	1040978	PRJNA165307	165307	Proteobacteria	Betaproteobacteria	6.55364	66.9	-	AXAK01	80	5977	5774	9/30/13	4/9/17	Contig	DOE Joint Genome Institute	SAMN02440787	GCA_000472465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/465/GCA_000472465.1_ASM47246v1	-	STM 6018
Leuconostoc citreum LBAE C11	1127128	PRJEA78995	78995	Terrabacteria group	Firmicutes	1.96996	38.7	-	CAGF01	83	1976	1827	12/21/11	3/30/17	Contig	LISBP	SAMEA2272136	GCA_000239915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/915/GCA_000239915.2_ASM23991v2	-	LBAE C11
Flavobacterium johnsoniae	986	PRJNA348616	348616	FCB group	Bacteroidetes/Chlorobi group	5.49218	34.7	-	MLFK01	13	4683	4539	11/15/16	4/16/17	Contig	Yale University	SAMN05912871	GCA_001879205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/205/GCA_001879205.1_ASM187920v1	-	CI04
Salmonella enterica subsp. enterica	59201	PRJNA380613	380613	Proteobacteria	Gammaproteobacteria	5.07091	51.9292	chromosome:NZ_CP020492.1/CP020492.1; plasmid pSE08-00436-1:NZ_CP020493.1/CP020493.1; plasmid pSE08-00436-2:NZ_CP020494.1/CP020494.1	-	3	5201	4893	8/1/17	8/3/17	Complete Genome	Federal Institute for Risk Assessment	SAMN06645218	GCA_002238275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/275/GCA_002238275.1_ASM223827v1	-	08-00436
Yersinia mollaretii	33060	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.66325	49.1	-	CQBM01	43	4280	4105	3/23/15	4/3/17	Scaffold	SC	SAMEA859902	GCA_001127065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/065/GCA_001127065.1_5139_5_7	-	FE82747
Yersinia intermedia	631	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.75608	47.4	-	CWJI01	36	4265	4122	7/8/15	4/4/17	Contig	SC	SAMEA859919	GCA_001244565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/565/GCA_001244565.1_5139_2_5	-	R148
Salmonella enterica subsp. enterica serovar Senftenberg	28150	PRJNA337942	337942	Proteobacteria	Gammaproteobacteria	5.26203	51.9275	chromosome:NZ_CP016837.1/CP016837.1; plasmid pSSE-ATCC-43845:NZ_CP016838.1/CP016838.1	-	2	5349	5021	1/23/17	7/7/17	Complete Genome	USDA-ARS-USMARC	SAMN05514141	GCA_001969425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/425/GCA_001969425.1_ASM196942v1	-	775W
Salinibacter ruber	146919	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.15669	66.4	-	DBCC01	332	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456962	GCA_002292885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/885/GCA_002292885.1_ASM229288v1	28894102	-
Burkholderia dolosa AU0158	350701	PRJNA16168	16168	Proteobacteria	Betaproteobacteria	6.4204	66.3	-	AAKY01	3	5917	5125	1/4/06	8/8/17	Scaffold	Broad Institute	SAMN02595213	GCA_000152585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/585/GCA_000152585.1_ASM15258v1	-	AU0158
Lachnoclostridium phytofermentans KNHs212	1458471	PRJNA237260	237260	Terrabacteria group	Firmicutes	4.71147	35.6	-	JNLM01	2	4039	3886	6/11/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02841206	GCA_000703105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/105/GCA_000703105.1_ASM70310v1	-	KNHs212
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA371529	371529	Proteobacteria	Gammaproteobacteria	5.27975	51.9162	chromosome:NZ_CP019649.1/CP019649.1; plasmid p275_TW-Stm6:NZ_CP019647.1/CP019647.1; plasmid p4_TW-Stm6:NZ_CP019648.1/CP019648.1	-	3	5469	5174	6/28/17	9/8/17	Complete Genome	University of Melbourne	SAMN06309456	GCA_002210025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/210/025/GCA_002210025.1_ASM221002v1	28818900	TW-Stm6
Geobacillus thermocatenulatus	33938	PRJNA353561	353561	Terrabacteria group	Firmicutes	3.74226	51.9	chromosome:NZ_CP018058.1/CP018058.1	-	1	3795	3419	8/8/17	8/10/17	Complete Genome	Kyungpook National University	SAMN06016323	GCA_002243665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/665/GCA_002243665.1_ASM224366v1	-	KCTC 3921
Salmonella enterica	28901	PRJNA320341	320341	Proteobacteria	Gammaproteobacteria	4.93808	51.9	chromosome:NZ_CP015574.1/CP015574.1	-	1	5038	4747	5/9/17	5/22/17	Complete Genome	Food-borne Pathogen Omics Research	SAMN04932651	GCA_002119485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/485/GCA_002119485.1_ASM211948v1	-	FORC_038
Sinorhizobium medicae WSM1369	1041149	PRJNA165337	165337	Proteobacteria	Alphaproteobacteria	6.40256	61.1	-	AQUS01	307	6608	5595	4/19/13	5/19/17	Contig	DOE Joint Genome Institute	SAMN02256492	GCA_000372345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/345/GCA_000372345.1_ASM37234v1	-	WSM1369
Clostridium novyi B str. NCTC 9691	1443122	PRJNA233466	233466	Terrabacteria group	Firmicutes	2.6389	27.5745	plasmid p2Cn9691:NZ_CM003341.1/CM003341.1; plasmid p4Cn9691:NZ_CM003342.1/CM003342.1; plasmid p5Cn9691:NZ_CM003343.1/CM003343.1	JENV01	131	2675	2399	6/20/14	4/3/17	Contig	National Veterinary Institute (SVA)	SAMN02593755	GCA_000724265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/265/GCA_000724265.2_NCTC9691_1.0	25254374	NCTC 9691
Neisseria meningitidis	487	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	2.18123	51.9	chromosome:NZ_CP020420.1/CP020420.1	-	1	2516	2120	3/29/17	4/11/17	Complete Genome	US Food and Drug Administration 	SAMN04875546	GCA_002073575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/575/GCA_002073575.1_ASM207357v1	-	FDAARGOS_209
Actinomyces sp. VUL4_3	1912795	PRJNA350350	350350	Terrabacteria group	Actinobacteria	2.20783	51.9	chromosome:NZ_CP017812.1/CP017812.1	-	1	1818	1740	10/31/16	4/13/17	Complete Genome	China CDC	SAMN05938308	GCA_001856685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/685/GCA_001856685.1_ASM185668v1	-	VUL4_3
Neisseria meningitidis	487	PRJNA294349	294349	Proteobacteria	Betaproteobacteria	2.19112	51.9	chromosome:NZ_CP012694.1/CP012694.1	-	1	2529	2187	10/3/16	3/21/17	Complete Genome	"National Institute for Communicable Disease Control and Prevention, Chinese CDC"	SAMN04023208	GCA_001750825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/825/GCA_001750825.1_ASM175082v1	-	331401
Campylobacter concisus UNSWCD	929793	PRJNA60429	60429	Proteobacteria	delta/epsilon subdivisions	1.77891	39.8	-	AENQ01	86	1818	1734	4/19/12	3/30/17	Contig	University of New South Wales	SAMN02471189	GCA_000259315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/315/GCA_000259315.1_ASM25931v1	21829448	UNSWCD
Thermosipho melanesiensis	46541	PRJNA231770	231770	Thermotogae	Thermotogae	1.8898	31.2	-	JYCY01	21	1961	1867	2/13/17	4/6/17	Contig	University of Oslo	SAMN03284848	GCA_001999545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/545/GCA_001999545.1_ASM199954v1	-	432
Haloquadratum walsbyi J07HQW1	1238424	PRJNA176224	176224	Euryarchaeota	Halobacteria	3.4755	49.4	-	ARPX01	1	3632	3581	6/26/13	9/10/13	Scaffold	"University of California, San Diego, Scripps Institution of Oceanography"	SAMN01940911	GCA_000415965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/965/GCA_000415965.1_J07B_scf56329a_trim	23637883	-
Sphingomonas wittichii DP58	400971	PRJNA78275	78275	Proteobacteria	Alphaproteobacteria	5.62889	67.8	-	AHKO01	739	5497	4941	2/9/12	5/19/17	Contig	"State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University"	SAMN02471022	GCA_000259955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/955/GCA_000259955.1_ASM25995v1	22689229	DP58
Citrobacter sp. FDAARGOS_156	1702170	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.72743	51.9	chromosome:NZ_CP014030.1/CP014030.1	-	1	4648	4327	2/11/16	4/11/17	Complete Genome	US Food and Drug Administration 	SAMN03996300	GCA_001559235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/235/GCA_001559235.1_ASM155923v1	-	FDAARGOS_155
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA285350	285350	Proteobacteria	Gammaproteobacteria	4.51284	51.9	chromosome:NZ_CP012599.1/CP012599.1	-	1	4723	4473	9/2/15	6/24/17	Complete Genome	university of pennyslvania	SAMN03744303	GCA_001278315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/315/GCA_001278315.1_ASM127831v1	-	0307-213
Petrotoga mobilis	69499	PRJNA278302	278302	Thermotogae	Thermotogae	1.60143	33.9	-	LGGR01	316	1738	1738	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445171	GCA_001509385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/385/GCA_001509385.1_ASM150938v1	26787827	-
Paenibacillus sp. FSL R7-0273	1536772	PRJNA258350	258350	Terrabacteria group	Firmicutes	7.28892	51.9	chromosome:NZ_CP009283.1/CP009283.1	-	1	6296	6112	9/22/14	4/9/17	Complete Genome	Cornell University	SAMN02996605	GCA_000758625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/625/GCA_000758625.1_ASM75862v1	-	FSL R7-0273
Finegoldia magna	1260	PRJNA272109	272109	Terrabacteria group	Firmicutes	1.82969	32.1	-	LRPW01	45	1775	1669	2/2/16	4/4/17	Scaffold	The Genome Institute at Washington University	SAMN03850950	GCA_001546385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/385/GCA_001546385.1_ASM154638v1	-	GED7760A
Salinispira pacifica	1307761	PRJNA227794	227794	Spirochaetes	Spirochaetia	3.7828	51.9	chromosome:NC_023035.1/CP006939.1	-	1	3330	3200	12/13/13	4/9/17	Complete Genome	Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures	SAMN02641517	GCA_000507245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/507/245/GCA_000507245.1_ASM50724v1	26203324	L21-RPul-D2
Labrenzia aggregata IAM 12614	384765	PRJNA18315	18315	Proteobacteria	Alphaproteobacteria	6.56139	59.4	-	AAUW01	48	6108	5847	11/28/06	5/18/17	Contig	J. Craig Venter Institute	SAMN02436089	GCA_000168975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/975/GCA_000168975.1_ASM16897v1	-	IAM 12614
Acholeplasma laidlawii	2148	PRJNA325217	325217	Terrabacteria group	Tenericutes	1.48087	31.9	-	LZGF01	38	1441	1367	9/16/16	4/13/17	Contig	Kazan Institute of Biochemistry and Biophysics KazSC RAS	SAMN05225430	GCA_001729645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/645/GCA_001729645.1_ASM172964v1	-	PG8R
Caldanaerobacter subterraneus subsp. yonseiensis KB-1	1388761	PRJNA215704	215704	Terrabacteria group	Firmicutes	2.70055	37.5	-	AXDC01	102	2777	2448	9/30/13	4/9/17	Contig	Kyungpook National University	SAMN02470224	GCA_000473865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/865/GCA_000473865.1_TyKB-1	24201201	KB-1
Vibrio shiloi A203	1224139	PRJNA172942	172942	Proteobacteria	Gammaproteobacteria	4.88972	44.3	-	ASHJ01	946	5023	3064	5/23/14	4/9/17	Contig	UFRJ	SAMN02798709	GCA_000695725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/725/GCA_000695725.1_Vshiloi203	24824949	A203
Neisseria meningitidis alpha14	662598	PRJNA39689	39689	Proteobacteria	Betaproteobacteria	2.14529	51.9	chromosome:NC_013016.1/AM889136.1	-	1	2469	2108	7/23/09	3/21/17	Complete Genome	Bielefeld University	SAMEA3138289	GCA_000083565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/083/565/GCA_000083565.1_ASM8356v1	18305155	alpha14
Bacillus coahuilensis p1.1.43	1150625	PRJNA84425	84425	Terrabacteria group	Firmicutes	3.40744	38	-	LDYG01	59	3528	3296	1/15/16	4/11/17	Contig	CINVESTAV-Irapuato	SAMN03614211	GCA_001516895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/895/GCA_001516895.1_ASM151689v1	26903955	p1.1.43
Methylobacterium populi	223967	PRJNA311626	311626	Proteobacteria	Alphaproteobacteria	7.02056	69.1	-	LSNC01	124	6630	6311	5/13/16	4/12/17	Scaffold	Institute of Microbial Technology	SAMN04486789	GCA_001643095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/095/GCA_001643095.1_ASM164309v1	-	CD11_7
Pectobacterium carotovorum subsp. carotovorum PC1	561230	PRJNA31289	31289	Proteobacteria	Gammaproteobacteria	4.86291	51.9	chromosome:NC_012917.1/CP001657.1	-	1	4393	4232	7/7/09	3/30/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598478	GCA_000023605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/605/GCA_000023605.1_ASM2360v1	-	PC1
Xylella fastidiosa M12	405440	PRJNA17823	17823	Proteobacteria	Gammaproteobacteria	2.47513	51.9	chromosome:NC_010513.1/CP000941.1	-	1	2312	2112	2/19/08	3/30/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598402	GCA_000019325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/325/GCA_000019325.1_ASM1932v1	20601474	M12
Akkermansia muciniphila	239935	PRJNA289613	289613	PVC group	Verrucomicrobia	2.73736	55.7	chromosome:NZ_CP021420.1/CP021420.1	-	1	2407	2325	6/20/17	7/21/17	Chromosome	Max von Pettenkofer-Institut	SAMN03854119	GCA_002201495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/495/GCA_002201495.1_ASM220149v1	-	YL44
Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12	1132507	PRJNA80939	80939	Proteobacteria	Gammaproteobacteria	4.94978	51.8911	chromosome:NC_016832.1/CP003278.1; plasmid unnamed:NC_016825.1/CP003279.1	-	2	5160	4774	2/1/12	2/26/17	Complete Genome	Centre for Chemical Biology (CCB@USM)	SAMN02603101	GCA_000245535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/535/GCA_000245535.1_ASM24553v1	22461552	P-stx-12
Pseudarthrobacter chlorophenolicus	85085	PRJEB16297	348889	Terrabacteria group	Actinobacteria	5.02097	65.9	-	FNLE01	3	4727	4560	10/20/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04489738	GCA_900104315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/315/GCA_900104315.1_IMG-taxon_2634166551_annotated_assembly	-	A6
Bdellovibrio bacteriovorus	959	PRJNA313393	313393	Proteobacteria	Oligoflexia	3.75523	45.4	-	LUKD01	12	3600	3533	3/15/16	4/5/17	Scaffold	Hebrew University of Jerusalem	SAMN04521036	GCA_001592745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/745/GCA_001592745.1_ASM159274v1	-	EC13
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA391357	391357	Proteobacteria	Gammaproteobacteria	5.14278	51.8907	chromosome:NZ_CP022168.1/CP022168.1; plasmid pWW012:NZ_CP022169.1/CP022169.1	-	2	5307	5009	9/19/17	9/21/17	Complete Genome	China National Center for Food Safety Risk Assessment	SAMN07267217	GCA_002313125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/125/GCA_002313125.1_ASM231312v1	-	WW012
Prevotella ruminicola	839	PRJEB18395	355731	FCB group	Bacteroidetes/Chlorobi group	3.65829	47.7	-	FRCJ01	20	3085	2978	12/2/16	4/6/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488494	GCA_900142855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/855/GCA_900142855.1_IMG-taxon_2623621019_annotated_assembly	-	BPI-34
Mycoplasma synoviae ATCC 25204	1267001	PRJNA183042	183042	Terrabacteria group	Tenericutes	0.736709	27.8	-	ARQH01	42	694	612	4/26/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02440502	GCA_000385095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/095/GCA_000385095.1_ASM38509v1	-	WVU 1853
Salmonella enterica subsp. enterica serovar Cubana str. CFSAN002050	1271863	PRJNA184141	184141	Proteobacteria	Gammaproteobacteria	5.26701	51.8899	chromosome:NC_021818.1/CP006055.1; plasmid unnamed:NC_021845.1/CP006056.1; plasmid unnamed2:NC_021819.1/CP006057.1	-	3	5378	5081	7/16/13	2/26/17	Complete Genome	FDA	SAMN01832088	GCA_000430125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/125/GCA_000430125.1_ASM43012v1	25359917	CFSAN002050
Paracoccus denitrificans	266	PRJEB17228	351442	Proteobacteria	Alphaproteobacteria	5.19296	66.8	-	FOYK01	90	5159	4937	11/1/16	4/14/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04244569	GCA_900115985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/985/GCA_900115985.1_IMG-taxon_2597490358_annotated_assembly	-	DSM 415
Geobacillus kaustophilus NBRC 102445	1220595	PRJDB414	172613	Terrabacteria group	Firmicutes	3.44638	52	-	BBJV01	118	3579	3284	8/2/14	4/9/17	Contig	National Institute of Technology and Evaluation	SAMD00000360	GCA_000739955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/955/GCA_000739955.1_ASM73995v1	-	NBRC 102445
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA298211	298211	Proteobacteria	Gammaproteobacteria	5.15749	51.887	chromosome:NZ_CP012930.1/CP012930.1; plasmid pN13-01290_2:NZ_CP012932.1/CP012932.1; plasmid pN13-01290_23:NZ_CP012931.1/CP012931.1; plasmid pN13-01290_3-1:NZ_CP012933.1/CP012933.1; plasmid pN13-01290_3-2:NZ_CP012934.1/CP012934.1; plasmid pN13-01290_3-3:NZ_CP012935.1/CP012935.1; plasmid pN13-01290_98:NZ_CP012936.1/CP012936.1	-	7	5312	5044	11/9/15	3/1/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN04156715	GCA_001441245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/245/GCA_001441245.1_ASM144124v1	26769926	N13-01290
Citrobacter freundii	546	PRJNA338780	338780	Proteobacteria	Gammaproteobacteria	5.49723	51.8833	chromosome:NZ_CP016952.1/CP016952.1; plasmid unnamed1:NZ_CP017058.1/CP017058.1; plasmid unnamed2:NZ_CP017059.1/CP017059.1	-	3	5540	5171	9/2/16	4/5/17	Complete Genome	Naval Research Laboratory	SAMN05570461	GCA_001718055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/055/GCA_001718055.1_ASM171805v1	-	SL151
Loktanella vestfoldensis DSM 16212	1122181	PRJNA187100	187100	Proteobacteria	Alphaproteobacteria	3.7216	61.8	-	ARNL01	45	3740	3600	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440979	GCA_000382265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/265/GCA_000382265.1_ASM38226v1	-	DSM 16212
Acidovorax avenae	80867	PRJNA293796	293796	Proteobacteria	Betaproteobacteria	5.63425	68.6	-	LJGO01	130	5016	4820	9/14/15	4/11/17	Contig	INTA	SAMN04009978	GCA_001282395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/395/GCA_001282395.1_ASM128239v1	26847889	T10_61
Pseudoalteromonas haloplanktis ATCC 14393	1117315	PRJNA77679	77679	Proteobacteria	Gammaproteobacteria	5.02147	40.8	-	AHCA01	56	4429	4239	12/15/11	5/19/17	Contig	Shandong University	SAMN02470924	GCA_000238355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/355/GCA_000238355.2_Phal_1.0	22535931	ATCC 14393
Yersinia bercovieri	634	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.33972	49.1	-	CHYZ01	41	4007	3828	4/21/15	4/11/17	Scaffold	SC	SAMEA859867	GCA_001319545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/545/GCA_001319545.1_4821_6_4	-	3016/84
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.09192	51.8824	chromosome 1:NZ_LT904878.1/LT904878.1; plasmid 2:NZ_LT904879.1/LT904879.1; plasmid 3:NZ_LT904880.1/LT904880.1	-	3	5345	4893	8/4/17	8/17/17	Complete Genome	SC	SAMEA2155565	GCA_001240865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/865/GCA_001240865.2_Ty3_193	-	ty3-193
Xanthomonas albilineans	29447	PRJNA270008	270008	Proteobacteria	Gammaproteobacteria	3.54265	63.3	-	JZIG01	4	3079	2815	3/25/15	4/3/17	Contig	CIRAD	SAMN03262494	GCA_000962925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/925/GCA_000962925.1_Xal-PNG_130-G1	-	PNG130
Salmonella enterica subsp. enterica serovar Typhi str. CT18	220341	PRJNA236	236	Proteobacteria	Gammaproteobacteria	5.13371	51.8776	chromosome:NC_003198.1/AL513382.1; plasmid pHCM1:NC_003384.1/AL513383.1; plasmid pHCM2:NC_003385.1/AL513384.1	-	3	4829	4473	11/7/01	4/14/17	Complete Genome	Sanger Institute	SAMEA1705914	GCA_000195995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/995/GCA_000195995.1_ASM19599v1	11677608	CT18
Methanoculleus marisnigri	2198	PRJNA278302	278302	Euryarchaeota	Methanomicrobia	1.82596	62.1	-	LGHE01	342	2106	2106	1/8/16	1/8/16	Scaffold	Lawrence Berkeley National Lab	SAMN03445185	GCA_001508665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/665/GCA_001508665.1_ASM150866v1	26787827	-
Sorangium cellulosum	56	PRJNA237842	237842	Proteobacteria	delta/epsilon subdivisions	11.8616	71.9	-	JEMA01	1271	9523	8254	3/11/16	4/6/17	Scaffold	Shandong University	SAMN02639847	GCA_001589285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/589/285/GCA_001589285.1_sce8312.1	-	So0008-312
Kocuria rhizophila P7-4	1029824	PRJNA66631	66631	Terrabacteria group	Actinobacteria	2.82033	70.5	-	AFID01	54	2464	2388	5/19/11	4/7/17	Contig	Genome Resource Center	SAMN02470195	GCA_000214115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/115/GCA_000214115.2_ASM21411v2	21685281	P7-4
Myxococcus fulvus	33	PRJEB17047	351183	Proteobacteria	delta/epsilon subdivisions	10.8247	70	-	FOIB01	42	8541	8307	10/29/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05443572	GCA_900111765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/765/GCA_900111765.1_IMG-taxon_2693429886_annotated_assembly	-	DSM 16525
Bordetella petrii J51	935861	PRJNA202358	202358	Proteobacteria	Betaproteobacteria	5.04356	68.5	-	JAEP01	30	4829	4718	1/10/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02584952	GCA_000518965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/965/GCA_000518965.1_ASM51896v1	-	J51
Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086	1243584	PRJNA177585	177585	Proteobacteria	Gammaproteobacteria	5.00542	51.8669	chromosome:NZ_CP022034.1/CP022034.1; plasmid punamed1:NZ_CP022036.1/CP022036.1; plasmid punamed2:NZ_CP022035.1/CP022035.1	-	3	5162	4837	6/26/17	6/28/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN04160808	GCA_002208255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/255/GCA_002208255.1_ASM220825v1	-	SA20060086
Citrobacter werkmanii	67827	PRJNA376618	376618	Proteobacteria	Gammaproteobacteria	5.14234	51.8429	chromosome:NZ_CP019986.1/CP019986.1; plasmid unnamed:NZ_CP019987.1/CP019987.1	-	2	5109	4820	3/13/17	3/15/17	Complete Genome	BGI	SAMN06444903	GCA_002025225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/225/GCA_002025225.1_ASM202522v1	-	BF-6
Thermus aquaticus	271	PRJNA291648	291648	Terrabacteria group	Deinococcus-Thermus	2.24879	67.8	-	LHCI01	108	2422	2189	9/8/15	4/11/17	Scaffold	University of Gdansk	SAMN03951125	GCA_001280255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/255/GCA_001280255.1_ASM128025v1	-	YT-1
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA358799	358799	Proteobacteria	Gammaproteobacteria	5.29322	51.8333	chromosome:NZ_CP019442.1/CP019442.1; plasmid unnamed1:NZ_CP019443.1/CP019443.1; plasmid unnamed2:NZ_CP019444.1/CP019444.1	-	3	5496	5194	2/7/17	3/2/17	Complete Genome	The forth affiliated hospital of Guangzhou medical university	SAMN06185755	GCA_001989635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/635/GCA_001989635.1_ASM198963v1	-	81741
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA298211	298211	Proteobacteria	Gammaproteobacteria	5.06248	51.8292	chromosome:NZ_CP016525.1/CP016525.1; plasmid p09-036813-1A_261:NZ_CP016526.1/CP016526.1; plasmid p09-036813-1A_3:NZ_CP016527.1/CP016527.1; plasmid p09-036813-1A_4:NZ_CP016528.1/CP016528.1; plasmid p09-036813-1A_42:NZ_CP016529.1/CP016529.1	-	5	5177	4905	7/21/16	3/1/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN05263546	GCA_001690135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/135/GCA_001690135.1_ASM169013v1	-	09-036813-1A
Bacillus pseudofirmus	79885	PRJNA357289	357289	Terrabacteria group	Firmicutes	3.91256	40.2	-	MSLQ01	47	4004	3845	1/10/17	4/16/17	Contig	"California State University, Fresno"	SAMN06140701	GCA_001940735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/735/GCA_001940735.1_ASM194073v1	-	MRWL7
Lactobacillus buchneri ATCC 11577	525318	PRJNA31483	31483	Terrabacteria group	Firmicutes	2.90603	39.7	-	ACGH01	104	2807	2615	2/12/09	4/7/17	Scaffold	Baylor College of Medicine	SAMN00001469	GCA_000159195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/195/GCA_000159195.1_ASM15919v1	-	ATCC 11577
Candidatus Riesia pediculicola	401619	PRJNA295781	295781	Proteobacteria	Gammaproteobacteria	0.582123	28.697	chromosome:NZ_CP012843.1/CP012843.1; plasmid ppan:NZ_CP012842.1/CP012842.1	-	2	539	495	3/29/17	4/10/17	Chromosome	University of Illinois Urbana-Champaign	SAMN04088563	GCA_002074015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/015/GCA_002074015.1_ASM207401v1	-	HHBH
[Eubacterium] rectale	39491	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.05697	41.6	-	CZAJ01	78	2931	2747	10/1/15	4/4/17	Contig	SC	SAMEA3545348	GCA_001405295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/295/GCA_001405295.1_14207_7_7	-	2789STDY5834884
Brevibacillus brevis FJAT-0809-GLX	1129895	PRJNA80571	80571	Terrabacteria group	Firmicutes	6.02045	47.3	-	AHKL01	72	5731	5467	3/12/13	5/18/17	Contig	"FJAT, Fujian Academy of Agriculture Sciences"	SAMN02469798	GCA_000346255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/255/GCA_000346255.1_FJAT-GLX-0809	23618715	FJAT-0809-GLX
Butyrivibrio proteoclasticus	43305	PRJEB17436	351635	Terrabacteria group	Firmicutes	4.16892	39.1	-	FOXO01	76	3771	3594	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487928	GCA_900115735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/735/GCA_900115735.1_IMG-taxon_2623620519_annotated_assembly	-	P18
Caldicellulosiruptor bescii	31899	PRJNA371180	371180	Terrabacteria group	Firmicutes	2.90675	35.1	-	NSHA01	2	2836	2593	9/13/17	9/15/17	Contig	DOE Joint Genome Institute	SAMN06296392	GCA_002300335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/335/GCA_002300335.1_ASM230033v1	-	RKCB123
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB5919	258621	Proteobacteria	Gammaproteobacteria	5.00889	51.8148	chromosome 1:LT905060.1; plasmid 2:LT905061.1	-	2	-	-	8/4/17	8/4/17	Complete Genome	SC	SAMEA2564026	GCA_900205245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/205/245/GCA_900205245.1_ISP_03_07467_98	-	-
Candidatus Accumulibacter phosphatis	327160	PRJNA238420	238420	Proteobacteria	Betaproteobacteria	3.62526	63.9	-	LBIU01	824	-	-	5/1/15	5/1/15	Contig	The University of Hong Kong	SAMN02644617	GCA_000987445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/987/445/GCA_000987445.1_ASM98744v1	25089581	-
Xylella fastidiosa Temecula1	183190	PRJNA285	285	Proteobacteria	Gammaproteobacteria	2.52115	51.8011	chromosome:NC_004556.1/AE009442.1; plasmid pXFPD1.3:NC_004554.1/AE009443.1	-	2	2355	2202	1/29/03	3/29/17	Complete Genome	Sao Paulo state (Brazil) Consortium	SAMN02603844	GCA_000007245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/245/GCA_000007245.1_ASM724v1	12533478	Temecula1
Lactobacillus fermentum	1613	PRJNA389240	389240	Terrabacteria group	Firmicutes	2.06361	51.8	chromosome:NZ_CP021790.1/CP021790.1	-	1	2137	1821	6/13/17	6/15/17	Complete Genome	Universita' degli Studi di Catania	SAMN07192734	GCA_002192435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/435/GCA_002192435.1_ASM219243v1	-	LAC FRN-92
Borrelia hermsii	140	PRJNA314817	314817	Spirochaetes	Spirochaetia	1.39902	30.2876	chromosome:NZ_CP014808.1/CP014808.1; plasmid lp200:NZ_CP014809.1/CP014809.1; plasmid lp28-1:NZ_CP014816.1/CP014816.1; plasmid lp28-2:NZ_CP014813.1/CP014813.1; plasmid lp28-3:NZ_CP014815.1/CP014815.1; plasmid lp28-4:NZ_CP014811.1/CP014811.1; plasmid lp32-1:NZ_CP014812.1/CP014812.1; plasmid lp53:NZ_CP014810.1/CP014810.1; plasmid unnamed:NZ_CP014826.1/CP014826.1; plasmid unnamed:NZ_CP014825.1/CP014825.1; plasmid unnamed:NZ_CP014822.1/CP014822.1; plasmid unnamed:NZ_CP014823.1/CP014823.1; plasmid unnamed:NZ_CP014824.1/CP014824.1; plasmid unnamed:NZ_CP014830.1/CP014830.1; plasmid unnamed:NZ_CP014828.1/CP014828.1; plasmid unnamed:NZ_CP014821.1/CP014821.1; plasmid unnamed:NZ_CP014819.1/CP014819.1; plasmid unnamed:NZ_CP014817.1/CP014817.1; plasmid unnamed:NZ_CP014829.1/CP014829.1; plasmid unnamed:NZ_CP014833.1/CP014833.1; plasmid unnamed:NZ_CP014818.1/CP014818.1; plasmid unnamed:NZ_CP014827.1/CP014827.1; plasmid unnamed:NZ_CP014831.1/CP014831.1; plasmid unnamed:NZ_CP014820.1/CP014820.1; plasmid unnamed:NZ_CP014832.1/CP014832.1; plasmid unnamed:NZ_CP014814.1/CP014814.1	-	26	1344	1239	3/28/16	4/5/17	Chromosome	"National Institute for Allergy and Infectious Diseases, National Institutes of Health"	SAMN04544264	GCA_001598195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/195/GCA_001598195.1_ASM159819v1	-	DAH-2E7
Clostridium carboxidivorans P7	536227	PRJNA33115	33115	Terrabacteria group	Firmicutes	5.59285	29.7	-	ACVI01	252	5222	4807	8/5/09	5/18/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN02441784	GCA_000175595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/595/GCA_000175595.1_ASM17559v1	-	P7
Yersinia aldovae	29483	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	4.30948	47.7	-	CQEJ01	67	3966	3699	3/22/15	4/10/17	Contig	SC	SAMEA1486457	GCA_001091225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/225/GCA_001091225.1_8016_2_89	-	IP06005
Yersinia rohdei	29485	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.48133	47	-	CQCB01	44	4170	3975	3/23/15	4/10/17	Contig	SC	SAMEA859904	GCA_001152185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/185/GCA_001152185.1_5139_5_9	-	82589
Pectobacterium carotovorum subsp. brasiliense	180957	PRJNA263220	263220	Proteobacteria	Gammaproteobacteria	4.92035	51.8	chromosome:NZ_CP009769.1/CP009769.1	-	1	4472	4267	1/4/17	4/6/17	Complete Genome	"Institute of Crop Sciences, Chinese Academy of Agricultural Science"	SAMN03104805	GCA_001932635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/635/GCA_001932635.1_ASM193263v1	-	BC1
Streptococcus equinus ATCC 9812	525379	PRJNA52999	52999	Terrabacteria group	Firmicutes	1.74173	37.4	-	AEVB01	20	1717	1544	1/28/11	3/30/17	Scaffold	Baylor College of Medicine	SAMN00217012	GCA_000187265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/265/GCA_000187265.1_ASM18726v1	-	ATCC 9812
Neisseria meningitidis	487	PRJNA291331	291331	Proteobacteria	Betaproteobacteria	2.20793	51.8	chromosome:NZ_CP012393.1/CP012393.1	-	1	2545	2219	8/2/16	3/21/17	Complete Genome	JLU	SAMN03944750	GCA_001697165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/165/GCA_001697165.1_ASM169716v1	-	DE8555
Alicyclobacillus acidocaldarius LAA1	543302	PRJNA30381	30381	Terrabacteria group	Firmicutes	2.94328	61.7	-	ACCS01	58	3023	2740	12/17/08	4/7/17	Scaffold	US DOE Joint Genome Institute (JGI-PGF)	SAMN02441801	GCA_000173835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/835/GCA_000173835.1_ASM17383v1	-	LAA1
Bacillus pseudomycoides	64104	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.30442	35.4	-	MWPX01	174	5580	5138	5/26/17	6/16/17	Contig	Cornell University	SAMN06238887	GCA_002158195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/158/195/GCA_002158195.1_ASM215819v1	-	FSL K6-0042
Photorhabdus asymbiotica subsp. australis	286156	PRJNA296853	296853	Proteobacteria	Gammaproteobacteria	4.91253	42.1	-	LOMY01	208	4459	4076	8/1/16	4/13/17	Scaffold	Goethe University	SAMN04110119	GCA_001696805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/805/GCA_001696805.1_ASM169680v1	-	PB68.1
Neisseria meningitidis	487	PRJNA291332	291332	Proteobacteria	Betaproteobacteria	2.20685	51.8	chromosome:NZ_CP012394.1/CP012394.1	-	1	2540	2209	8/2/16	3/21/17	Complete Genome	JLU	SAMN03944751	GCA_001697205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/205/GCA_001697205.1_ASM169720v1	-	WUE2121
Mycobacterium kansasii	1768	PRJNA374853	374853	Terrabacteria group	Actinobacteria	6.42127	66.1	chromosome:NZ_CP019883.1/CP019883.1	-	1	5753	5337	4/11/17	4/13/17	Chromosome	University of Lodz	SAMN06339040	GCA_002085625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/625/GCA_002085625.1_ASM208562v1	-	1MK
Teredinibacter turnerae T7902	1056820	PRJNA163003	163003	Proteobacteria	Gammaproteobacteria	5.38782	50.8	-	ARAH01	72	4456	4294	4/22/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02256427	GCA_000379165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/165/GCA_000379165.1_ASM37916v1	-	T7902
Laribacter hongkongensis DSM 14985	1122157	PRJNA185634	185634	Proteobacteria	Betaproteobacteria	3.11031	62.4	-	AUHR01	40	3003	2833	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441509	GCA_000423285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/285/GCA_000423285.1_ASM42328v1	-	DSM 14985
Candidatus Hamiltonella defensa MED (Bemisia tabaci)	1163751	PRJNA80993	80993	Proteobacteria	Gammaproteobacteria	1.80079	40.5	-	AJLH02	92	1771	1555	4/10/12	4/11/17	Contig	Zhejiang University	SAMN02712577	GCA_000258345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/345/GCA_000258345.2_ASM25834v2	"2,268,924,325,887,810"	MED (Bemisia tabaci)
Brachyspira hyodysenteriae ATCC 27164	1266923	PRJNA183036	183036	Spirochaetes	Spirochaetia	3.05049	27.1	-	ARSY01	46	2689	2586	4/26/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441635	GCA_000383255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/255/GCA_000383255.1_ASM38325v1	-	B78
Dickeya zeae NCPPB 3532	1224147	PRJNA172951	172951	Proteobacteria	Gammaproteobacteria	4.55706	53.6	chromosome:NZ_CM001858.1/CM001858.1	AONW01	1	4132	3948	4/3/13	4/1/17	Chromosome	James Hutton Institute	SAMN02470083	GCA_000400525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/525/GCA_000400525.1_DZE3532_1.0	24265502	NCPPB 3532
Pectobacterium wasabiae	55208	PRJNA258525	258525	Proteobacteria	Gammaproteobacteria	5.00919	50.5	-	JQHP01	89	4687	4466	9/8/14	4/9/17	Contig	Food and Environment Research Agency	SAMN02999477	GCA_000749865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/865/GCA_000749865.1_ASM74986v1	-	NCPPB 3701
Bacillus vallismortis	72361	PRJNA270602	270602	Terrabacteria group	Firmicutes	4.15531	43	-	LQYR01	22	4186	3938	3/11/16	4/12/17	Scaffold	University of Groningen	SAMN03267289	GCA_001587405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/405/GCA_001587405.1_B4144	27174261	B4144_201601
Lactobacillus crispatus MV-1A-US	575596	PRJNA37951	37951	Terrabacteria group	Firmicutes	2.2525	36.8	-	ACOG02	7	2472	2154	8/24/09	4/2/17	Scaffold	Broad Institute	SAMN02463726	GCA_000161915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/915/GCA_000161915.2_Lacto_cris_MV-1A-US_V2	-	MV-1A-US
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.16151	51.8	chromosome:NZ_CP016648.1/CP016648.1	-	1	2500	2169	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883371	GCA_001697385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/385/GCA_001697385.1_ASM169738v1	-	M09293
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.1622	51.8	chromosome:NZ_CP016652.1/CP016652.1	-	1	2502	2171	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883369	GCA_001697465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/465/GCA_001697465.1_ASM169746v1	-	M08001
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.1575	51.8	chromosome:NZ_CP016653.1/CP016653.1	-	1	2494	2163	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883381	GCA_001697485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/485/GCA_001697485.1_ASM169748v1	-	M22748
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.1634	51.8	chromosome:NZ_CP016657.1/CP016657.1	-	1	2505	2172	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883379	GCA_001697565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/565/GCA_001697565.1_ASM169756v1	-	M22745
Serratia symbiotica SCt-VLC	1347341	PRJEB4172	253258	Proteobacteria	Gammaproteobacteria	2.50033	52.1	-	-	22	2587	1695	-	-	Scaffold	Centre de Biologie pour la Gestion des Populations (CBGP - UMR1062)	SAMEA3293443	GCA_900002265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/002/265/GCA_900002265.1_SsymSCtVLC_01	-	SCt-VLC
Vulcanisaeta distributa JCM 11217	1293044	PRJDB791	243703	TACK group	Crenarchaeota	2.07605	45.7	-	BBBJ01	19	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000416	GCA_001316005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/005/GCA_001316005.1_ASM131600v1	-	JCM 11217
Acidovorax delafieldii	47920	PRJNA299404	299404	Proteobacteria	Betaproteobacteria	5.72102	64.8	-	LSIH01	680	5497	4987	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299431	GCA_001556145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/145/GCA_001556145.1_ASM155614v1	-	CCH3-G3
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.15434	51.8	chromosome:NZ_CP016665.1/CP016665.1	-	1	2479	2147	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883370	GCA_001697725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/725/GCA_001697725.1_ASM169772v1	-	M09261
Escherichia fergusonii B253	550694	PRJNA38067	38067	Proteobacteria	Gammaproteobacteria	4.77596	49.8	-	AEIA01	20	4833	4548	2/25/11	2/22/17	Scaffold	Broad Institute	SAMN02596695	GCA_000190495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/495/GCA_000190495.1_ASM19049v1	-	B253
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.16238	51.8	chromosome:NZ_CP016681.1/CP016681.1	-	1	2497	2165	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883368	GCA_001698065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/065/GCA_001698065.1_ASM169806v1	-	M08000
Brucella neotomae 5K33	520456	PRJNA230241	230241	Proteobacteria	Alphaproteobacteria	3.28968	57.2	-	AZBJ02	177	3094	2654	5/9/14	10/21/14	Contig	Smi	SAMN02427357	GCA_000712255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/255/GCA_000712255.2_Bneotomae2.0	25278518	5K33
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.15549	51.8	chromosome:NZ_CP016683.1/CP016683.1	-	1	2489	2164	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883375	GCA_001698105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/105/GCA_001698105.1_ASM169810v1	-	M22191
Streptomyces viridochromogenes	1938	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.6263	70.4	-	LFNT01	329	9484	8818	7/7/15	3/11/17	Contig	University of Illinois	SAMN02900581	GCA_001047325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/325/GCA_001047325.1_ASM104732v1	-	NRRL 3414
Streptomyces lividans TK24	457428	PRJNA33603	33603	Terrabacteria group	Actinobacteria	8.31801	71.8	-	ACEY01	1	7745	7109	2/26/09	5/19/17	Scaffold	Broad Institute	SAMN02595300	GCA_000158935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/935/GCA_000158935.1_ASM15893v1	-	TK24
Acidaminococcus fermentans	905	PRJEB17225	351445	Terrabacteria group	Firmicutes	2.34489	55.7	-	FOWJ01	57	2224	2083	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910455	GCA_900115425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/425/GCA_900115425.1_IMG-taxon_2593339211_annotated_assembly	-	pGA-4
Fusobacterium periodonticum 1_1_41FAA	469621	PRJNA32469	32469	Fusobacteria	Fusobacteriia	2.47946	28.1	-	ADGG01	31	2469	2264	3/30/10	4/7/17	Scaffold	Broad Institute	SAMN02463706	GCA_000163935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/935/GCA_000163935.1_ASM16393v1	-	1_1_41FAA
Staphylococcus carnosus subsp. utilis	147449	PRJNA278706	278706	Terrabacteria group	Firmicutes	2.63244	34.4	-	LAIU01	34	2596	2390	4/6/15	4/10/17	Contig	University of Hohenheim	SAMN03428885	GCA_000969565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/565/GCA_000969565.1_ASM96956v1	25977432	LTH7013
Corynebacterium glutamicum	1718	PRJDB1734	319916	Terrabacteria group	Actinobacteria	3.53751	51.8	chromosome:AP017369.1	-	1	3278	3197	5/3/16	5/3/16	Complete Genome	Yamaguchi University	SAMD00000552	GCA_002355155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/155/GCA_002355155.1_ASM235515v1	-	N24
candidate division Kazan bacterium GW2011_GWA1_50_15	1620412	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.602646	51.8	chromosome:CP011216.1	-	1	595	591	6/19/15	9/21/17	Complete Genome	"Banfield Lab, University of California, Berkeley"	SAMN03319988	GCA_001029795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/795/GCA_001029795.1_ASM102979v1	-	-
Acidithiobacillus caldus	33059	PRJNA318365	318365	Proteobacteria	Acidithiobacillia	2.87339	61.3	-	LXQG01	220	2881	2680	5/23/16	4/5/17	Contig	Shandong University	SAMN04849265	GCA_001650235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/235/GCA_001650235.1_ASM165023v1	-	MTH-04
Olsenella uli MSTE5	1190621	PRJNA165915	165915	Terrabacteria group	Actinobacteria	2.15324	64.5	-	JANC01	14	1940	1859	1/28/14	4/9/17	Contig	JCVI	SAMN02641569	GCA_000524335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/335/GCA_000524335.1_OulMSTE5v1.0	-	MSTE5
Bacteroides finegoldii CL09T03C10	997888	PRJNA64831	64831	FCB group	Bacteroidetes/Chlorobi group	5.12411	42.5	-	AKBZ01	16	4279	4075	6/15/12	5/18/17	Contig	Broad Institute	SAMN02463931	GCA_000269545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/545/GCA_000269545.1_PB_Bact_thet_CL09T03C10_V1	22829535	CL09T03C10
Bacteroides eggerthii 1_2_48FAA	665953	PRJNA40009	40009	FCB group	Bacteroidetes/Chlorobi group	4.61153	44.7	-	AKBX01	28	4003	3841	6/15/12	5/18/17	Contig	Broad Institute	SAMN02463790	GCA_000273465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/465/GCA_000273465.1_PB_Bact_egge_1_2_48FAA_V1	22829535	1_2_48FAA
Brevundimonas subvibrioides	74313	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	3.13039	68.5	-	NCEB01	75	3153	3018	8/16/17	8/16/17	Scaffold	None	SAMN06622357	GCA_002280475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/475/GCA_002280475.1_ASM228047v1	-	-
Lactobacillus jensenii 1153	440497	PRJNA31205	31205	Terrabacteria group	Firmicutes	1.74622	34.6	-	ABWG02	1	1657	1202	10/14/08	4/10/17	Scaffold	Broad Institute	SAMN02463685	GCA_000155915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/915/GCA_000155915.2_Lacto_jensenii_1153_V2	-	1153
Lactobacillus ruminis SPM0211	1040964	PRJNA67675	67675	Terrabacteria group	Firmicutes	2.17223	43.7	-	AFOJ01	12	2228	2032	6/9/11	3/30/17	Contig	"Center for Human and Environmental Microbiome, Korea"	SAMN02470898	GCA_000217755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/755/GCA_000217755.2_ASM21775v1	21742873	SPM0211
Bacteroides dorei 5_1_36/D4	556260	PRJNA32451	32451	FCB group	Bacteroidetes/Chlorobi group	5.53825	41.7	-	ACDI02	10	4652	4390	2/18/09	5/18/17	Scaffold	Broad Institute	SAMN02463698	GCA_000158335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/335/GCA_000158335.2_Bact_dorei_5_1_36_D4_V2	-	5_1_36/D4
Porphyromonas uenonis DSM 23387 = JCM 13868	1122976	PRJDB580	243155	FCB group	Bacteroidetes/Chlorobi group	2.2601	52.7	-	BAJM01	112	1839	1414	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00011592	GCA_000613705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/705/GCA_000613705.1_ASM61370v1	-	JCM 13868
Mobiluncus mulieris FB024-16	866770	PRJNA51063	51063	Terrabacteria group	Actinobacteria	2.38488	55.1	-	AEGV01	46	2171	2032	9/24/10	4/7/17	Contig	J. Craig Venter Institute	SAMN00100748	GCA_000148485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/485/GCA_000148485.2_ASM14848v1	-	FB024-16
Neisseria meningitidis LNP21362	1386087	PRJNA215160	215160	Proteobacteria	Betaproteobacteria	2.13996	51.8	chromosome:NZ_CP006869.1/CP006869.1	-	1	2441	2114	1/7/15	3/21/17	Complete Genome	Institut Pasteur	SAMN03201679	GCA_000816165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/165/GCA_000816165.1_ASM81616v1	-	LNP21362
Prevotella bivia	28125	PRJNA272094	272094	FCB group	Bacteroidetes/Chlorobi group	2.57917	39.9	-	LTAG01	114	2286	2136	2/25/16	4/5/17	Scaffold	The Genome Institute at Washington University	SAMN03854509	GCA_001574405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/405/GCA_001574405.1_ASM157440v1	-	GED7880
Peptostreptococcus anaerobius	1261	PRJNA272075	272075	Terrabacteria group	Firmicutes	2.00268	35.9	-	LSDI01	88	1809	1724	2/8/16	4/4/17	Scaffold	The Genome Institute at Washington University	SAMN03854409	GCA_001553145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/145/GCA_001553145.1_ASM155314v1	-	KA00810
Prevotella melaninogenica D18	575612	PRJNA40045	40045	FCB group	Bacteroidetes/Chlorobi group	3.29234	41	-	ACWY01	46	2588	2391	1/8/10	4/7/17	Scaffold	Broad Institute	SAMN02463806	GCA_000163035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/035/GCA_000163035.1_ASM16303v1	-	D18
Peptoniphilus lacrimalis DNF00528	1401070	PRJNA219668	219668	Terrabacteria group	Firmicutes	3.50325	34.7	-	JRNL01	126	3334	3237	9/26/14	9/26/14	Contig	J. Craig Venter Institute	SAMN02850969	GCA_000759145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/145/GCA_000759145.1_04_NF40_HMP2134v01	-	DNF00528
Atopobium vaginae	82135	PRJNA272124	272124	Terrabacteria group	Actinobacteria	1.50416	42.6	-	LSOA01	24	1310	1208	2/17/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN03842164	GCA_001562845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/845/GCA_001562845.1_ASM156284v1	-	CMW7778A
Rothia dentocariosa	2047	PRJNA246623	246623	Terrabacteria group	Actinobacteria	2.64434	56.5	-	JQHE01	38	2334	2222	10/6/14	4/2/17	Contig	University of Malaya	SAMN02996612	GCA_000763685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/685/GCA_000763685.1_ASM76368v1	-	C6B
Enhydrobacter aerosaccus	225324	PRJNA290969	290969	Proteobacteria	Alphaproteobacteria	2.85582	43.4	-	LGSW01	33	2585	2380	7/29/15	7/29/15	Contig	Tianjin University	SAMN03938333	GCA_001188545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/545/GCA_001188545.1_ASM118854v1	-	CGMCC9176
Bifidobacterium angulatum DSM 20098 = JCM 7096	518635	PRJNA29261	29261	Terrabacteria group	Actinobacteria	2.00821	59.4	-	ABYS02	6	1633	1526	10/30/08	4/7/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008777	GCA_000156635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/635/GCA_000156635.1_ASM15663v1	-	DSM 20098
Providencia alcalifaciens DSM 30120	520999	PRJNA29297	29297	Proteobacteria	Gammaproteobacteria	4.02935	41.8	-	ABXW01	79	3832	3691	10/23/08	3/30/17	Contig	Washington University Genome Sequencing Center	SAMN00008853	GCA_000173415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/415/GCA_000173415.1_ASM17341v1	-	DSM 30120
Bifidobacterium pseudocatenulatum IPLA36007	1454376	PRJNA236475	236475	Terrabacteria group	Actinobacteria	2.32818	56.3	-	JEOD01	23	1939	1814	6/13/14	4/2/17	Contig	Insituto de Productos Lacteos de Asturias (IPLA-CSIC)	SAMN02649570	GCA_000708005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/005/GCA_000708005.1_B.p.IPLA36007	25097668	IPLA36007
Providencia rettgeri DSM 1131	521000	PRJNA29299	29299	Proteobacteria	Gammaproteobacteria	4.76407	40.1	-	ACCI02	32	4466	4211	1/22/09	3/30/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008854	GCA_000158055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/055/GCA_000158055.1_ASM15805v1	-	DSM 1131
Bacteroides coprophilus JCM 13817	1342726	PRJDB1137	245971	FCB group	Bacteroidetes/Chlorobi group	3.8551	45.7	-	BBII01	161	3444	2658	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00017009	GCA_001315765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/765/GCA_001315765.1_ASM131576v1	-	JCM 13817
Neisseria elongata subsp. glycolytica	88719	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	2.36578	54.2	-	JVVT01	114	2406	2244	7/10/15	4/10/17	Contig	University of Washington	SAMN03197249	GCA_001061435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/435/GCA_001061435.1_ASM106143v1	26230489	1279_NMEN
Neisseria flavescens	484	PRJNA274665	274665	Proteobacteria	Betaproteobacteria	2.25393	49.3	-	LAEH01	38	2241	2036	4/8/16	4/12/17	Contig	university of milan	SAMN03329000	GCA_001618015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/015/GCA_001618015.1_ASM161801v1	-	CD-NF1
Neisseria mucosa	488	PRJNA246622	246622	Proteobacteria	Betaproteobacteria	2.13895	49.7	-	JQHF01	34	2083	1963	10/6/14	4/9/17	Contig	University of Malaya	SAMN02996611	GCA_000763635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/635/GCA_000763635.1_ASM76363v1	-	C6A
Neisseria sicca 4320	933266	PRJNA60861	60861	Proteobacteria	Betaproteobacteria	2.5194	50.8	-	AEPF01	169	2497	2253	12/29/10	4/7/17	Contig	"University of Maryland, College Park"	SAMN02471879	GCA_000193735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/735/GCA_000193735.2_ASM19373v2	-	4320
Pectobacterium carotovorum subsp. odoriferum	78398	PRJNA263297	263297	Proteobacteria	Gammaproteobacteria	4.93358	51.8	chromosome:CP009678.1	-	1	4340	3855	10/28/14	10/28/14	Complete Genome	Beijing Agro-Biotechnology Research Center	SAMN03098274	GCA_000769535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/535/GCA_000769535.1_ASM76953v1	-	BC S7
Staphylococcus hominis SK119	629742	PRJNA34087	34087	Terrabacteria group	Firmicutes	2.22624	31.3	-	ACLP01	37	2197	2087	4/29/09	3/30/17	Contig	J. Craig Venter Institute	SAMN00001902	GCA_000174735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/735/GCA_000174735.1_ASM17473v1	-	SK119
Neisseria meningitidis	487	PRJNA239655	239655	Proteobacteria	Betaproteobacteria	2.18802	51.8	chromosome:NZ_CP007524.1/CP007524.1	-	1	2523	2183	4/11/14	3/21/17	Complete Genome	"Institute of Pathogen Biology, CAMS"	SAMN02709031	GCA_000626595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/595/GCA_000626595.1_ASM62659v1	24812217	510612
Corynebacterium amycolatum	43765	PRJNA339674	339674	Terrabacteria group	Actinobacteria	2.58783	58.6	-	MTPT01	181	2285	2144	1/31/17	4/17/17	Contig	Institute of Cellular and Intracellular Symbiosis Russian Academy of Sciences	SAMN06233788	GCA_001975925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/925/GCA_001975925.1_ASM197592v1	-	ICIS 9
Mobiluncus curtisii ATCC 51333	887326	PRJNA52983	52983	Terrabacteria group	Actinobacteria	2.12213	55.5	-	AEPY01	6	1859	1769	12/27/10	4/7/17	Scaffold	Baylor College of Medicine	SAMN00217011	GCA_000185425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/425/GCA_000185425.1_ASM18542v1	-	ATCC 51333
Corynebacterium glucuronolyticum ATCC 51866	548478	PRJNA31549	31549	Terrabacteria group	Actinobacteria	2.87526	58.9	-	ACHF01	96	2555	2421	3/11/09	4/7/17	Scaffold	Baylor College of Medicine	SAMN00001463	GCA_000159595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/595/GCA_000159595.1_ASM15959v1	-	ATCC 51866
Actinomyces urogenitalis	103621	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.59837	68.8	-	JUUL01	136	2164	2055	7/10/15	4/10/17	Contig	University of Washington	SAMN03197959	GCA_001067145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/145/GCA_001067145.1_ASM106714v1	26230489	752_PACI
Enterobacter cancerogenus	69218	PRJNA263657	263657	Proteobacteria	Gammaproteobacteria	5.67025	53.8	-	JRUP01	101	5340	5113	11/10/14	4/2/17	Contig	University of Malaya	SAMN03105171	GCA_000773965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/965/GCA_000773965.1_ASM77396v1	-	M004
Roseburia intestinalis M50/1	657315	PRJNA39165	39165	Terrabacteria group	Firmicutes	4.14355	42.5	chromosome:FP929049.1	-	1	3534	3478	3/25/10	2/27/15	Chromosome	MetaHIT	SAMEA3138359	GCA_000209995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/209/995/GCA_000209995.1_ASM20999v1	-	M50/1
Gemella sanguinis	84135	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.90548	29.7	-	JWDE01	118	1801	1743	7/10/15	4/10/17	Contig	University of Washington	SAMN03197056	GCA_001052115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/115/GCA_001052115.1_ASM105211v1	26230489	1094_BTHU
Parabacteroides johnsonii	387661	PRJNA377666	377666	FCB group	Bacteroidetes/Chlorobi group	4.44894	45	-	NFIJ01	72	3611	3436	5/30/17	6/12/17	Contig	Veterinary Research Institute	SAMN06473724	GCA_002161725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/725/GCA_002161725.1_ASM216172v1	-	An42
Prevotella copri	165179	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	3.22147	44.1	-	CZAM01	2159	4875	4835	10/1/15	5/19/16	Contig	SC	SAMEA3545346	GCA_001405915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/915/GCA_001405915.1_14207_7_4	-	2789STDY5834881
Bacteroides cellulosilyticus CL02T12C19	997874	PRJNA64803	64803	FCB group	Bacteroidetes/Chlorobi group	7.6942	43	-	AGXG01	25	6303	6006	6/25/12	5/18/17	Scaffold	Broad Institute	SAMN02463917	GCA_000273015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/015/GCA_000273015.1_Bact_cell_CL02T12C19_V1	-	CL02T12C19
Staphylococcus capitis C87	435838	PRJNA38749	38749	Terrabacteria group	Firmicutes	2.47361	32.9	-	ACRH01	14	2452	2239	11/30/10	3/30/17	Scaffold	Broad Institute	SAMN02463752	GCA_000183705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/705/GCA_000183705.1_ASM18370v1	-	C87
Helicobacter cinaedi CCUG 18818 = ATCC BAA-847	537971	PRJNA30073	30073	Proteobacteria	delta/epsilon subdivisions	2.21447	38.6	-	ABQT01	50	2298	2181	8/26/08	4/7/17	Scaffold	Broad Institute	SAMN02463680	GCA_000155475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/475/GCA_000155475.1_ASM15547v1	25212613	CCUG 18818
Campylobacter showae CC57C	1073353	PRJNA189774	189774	Proteobacteria	delta/epsilon subdivisions	2.18735	45.4	-	AOTD01	273	2246	1994	3/5/13	4/11/17	Contig	BC Cancer Agency	SAMN02469328	GCA_000344295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/295/GCA_000344295.2_velvet	-	CC57C
Gemella haemolysans	1379	PRJNA272078	272078	Terrabacteria group	Firmicutes	1.89252	30.7	-	LSDC01	83	1752	1651	2/8/16	4/17/17	Scaffold	The Genome Institute at Washington University	SAMN03851017	GCA_001553035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/035/GCA_001553035.1_ASM155303v1	-	DNF01167
Acinetobacter radioresistens NIPH 2130	1217674	PRJNA183278	183278	Proteobacteria	Gammaproteobacteria	3.16492	41.7	-	APQE01	6	3014	2888	4/16/13	4/10/17	Scaffold	Broad Institute	SAMN01087836	GCA_000368885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/885/GCA_000368885.1_Acin_radi_NIPH_2130_V1	-	NIPH 2130
Staphylococcus warneri VCU121	904338	PRJNA53759	53759	Terrabacteria group	Firmicutes	2.45939	32.5	-	AFEC01	183	2427	2214	4/26/11	3/30/17	Contig	J. Craig Venter Institute	SAMN00116865	GCA_000211215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/211/215/GCA_000211215.2_ASM21121v2	-	VCU121
Eikenella corrodens CC92I	1073362	PRJNA71555	71555	Proteobacteria	Betaproteobacteria	2.21491	55.6	-	AZGQ01	9	2196	2085	12/9/13	4/2/17	Scaffold	Broad Institute	SAMN00103446	GCA_000504685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/685/GCA_000504685.1_Eike_corr_CC92I_V1	-	CC92I
Veillonella dispar DORA_11	1403949	PRJNA221498	221498	Terrabacteria group	Firmicutes	2.43261	38.5	-	AZMJ01	605	2680	2680	12/16/13	12/16/13	Contig	"University of California, Berkeley"	SAMN02316559	GCA_000508585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/585/GCA_000508585.1_Vll_DORA_11_velvet_1.1	-	-
Corynebacterium striatum	43770	PRJNA280207	280207	Terrabacteria group	Actinobacteria	2.61198	59.4	-	LAYR01	28	2468	2089	5/5/15	4/10/17	Contig	Universidade Federal do Para	SAMN03458462	GCA_000988225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/225/GCA_000988225.1_ASM98822v1	26251495	1961
Corynebacterium aurimucosum ATCC 700975	548476	PRJNA31451	31451	Terrabacteria group	Actinobacteria	2.73033	60.7	-	ACLH01	101	2606	2467	4/27/09	3/30/17	Contig	Baylor College of Medecine	SAMN00138950	GCA_000174695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/695/GCA_000174695.1_ASM17469v1	-	ATCC 700975
Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043	566552	PRJNA237576	237576	Terrabacteria group	Actinobacteria	2.10636	56.4	-	JDTP01	164	1807	1638	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442007	GCA_000771025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/025/GCA_000771025.1_DSM-16992	25658111	DSM 16992
Hungatella hathewayi 12489931	999412	PRJNA64875	64875	Terrabacteria group	Firmicutes	6.87302	49.3	-	AGYU01	6	6073	5829	4/19/13	5/19/17	Scaffold	Broad Institute	SAMN02596771	GCA_000371445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/445/GCA_000371445.1_Clos_hath_12489931_V1	-	12489931
Roseburia inulinivorans	360807	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.70262	41.2	-	CYYR01	60	3528	3298	10/1/15	4/11/17	Contig	SC	SAMEA3545243	GCA_001406675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/675/GCA_001406675.1_13414_6_19	-	2789STDY5608835
Bifidobacterium gallicum DSM 20093 = LMG 11596	561180	PRJNA237576	237576	Terrabacteria group	Actinobacteria	1.98985	57.6	-	JDTW01	56	1561	1476	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442014	GCA_000771165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/165/GCA_000771165.1_DSM-20093	25658111	DSM 20093
Anaerococcus hydrogenalis ACS-025-V-Sch4	879306	PRJNA52027	52027	Terrabacteria group	Firmicutes	1.98153	29.8	-	AEXN01	53	1932	1737	3/7/11	4/7/17	Contig	J. Craig Venter Institute	SAMN00138209	GCA_000191745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/745/GCA_000191745.2_ASM19174v1	-	ACS-025-V-Sch4
Neisseria meningitidis WUE 2594	942513	PRJEA61527	61527	Proteobacteria	Betaproteobacteria	2.22725	51.8	chromosome:NC_017512.1/FR774048.1	-	1	2564	2205	1/17/11	3/21/17	Complete Genome	Bielefeld Univeristy - Center for Biotechnology (CeBiTec)	SAMEA2272690	GCA_000253215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/215/GCA_000253215.1_ASM25321v1	21296965	WUE 2594
Rhodococcus hoagii NBRC 101255 = C 7	1219013	PRJNA190104	190104	Terrabacteria group	Actinobacteria	5.19666	68.8	-	APJC01	48	4864	4702	10/9/13	6/5/17	Contig	University of Strathclyde	SAMN02471952	GCA_000473915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/915/GCA_000473915.1_Prescottia_equi_Genome_sequencing	"2,316,126,224,376,240"	C 7
Helicobacter bilis WiWa	1235804	PRJNA176005	176005	Proteobacteria	delta/epsilon subdivisions	2.55966	34.9	-	AQFW01	17	2400	2209	4/8/13	4/1/17	Scaffold	Broad Institute	SAMN01731009	GCA_000364285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/285/GCA_000364285.1_Heli_bili_WiWa_V1	-	WiWa
Lactobacillus iners LactinV 11V1-d	879300	PRJNA52039	52039	Terrabacteria group	Firmicutes	1.31025	32.6	-	AEHN01	27	1311	1128	10/5/10	3/30/17	Contig	J. Craig Venter Institute	SAMN00115040	GCA_000149065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/149/065/GCA_000149065.2_ASM14906v1	-	LactinV 11V1-d
Neisseria meningitidis Z2491	122587	PRJNA252	252	Proteobacteria	Betaproteobacteria	2.18441	51.8	chromosome:NC_003116.1/AL157959.1	-	1	2513	2186	9/27/01	3/21/17	Complete Genome	Sanger Institute	SAMEA1705949	GCA_000009105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/105/GCA_000009105.1_ASM910v1	10761919	Z2491
Lactobacillus amylolyticus DSM 11664	585524	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.53739	38.2	-	AZEP01	98	1572	1404	11/6/15	4/11/17	Contig	Shanghai Majorbio	SAMN02369499	GCA_001435665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/665/GCA_001435665.1_ASM143566v1	26415554	DSM 11664
Cardiobacterium hominis	2718	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	2.56149	59.4	-	JVAR01	178	2482	2310	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197797	GCA_001057485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/485/GCA_001057485.1_ASM105748v1	26230489	598_FBAL
Xylella fastidiosa subsp. fastidiosa GB514	788929	PRJNA49399	49399	Proteobacteria	Gammaproteobacteria	2.51738	51.774	chromosome:NC_017562.1/CP002165.1; plasmid unnamed:NC_017561.1/CP002166.1	-	2	2365	2074	9/23/10	4/11/17	Complete Genome	Research and Testing Laboratory	SAMN02603754	GCA_000148405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/405/GCA_000148405.1_ASM14840v1	-	GB514
Citrobacter freundii	546	PRJNA391280	391280	Proteobacteria	Gammaproteobacteria	5.60247	51.7689	chromosome:NZ_CP022151.1/CP022151.1; plasmid p705SK3_1:NZ_CP022152.1/CP022152.1; plasmid p705SK3_2:NZ_CP022153.1/CP022153.1	-	3	5717	5365	6/30/17	7/3/17	Complete Genome	University of Zurich	SAMN07260758	GCA_002211705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/705/GCA_002211705.1_ASM221170v1	-	705SK3
Ruminococcus flavefaciens FD-1	641112	PRJNA37767	37767	Terrabacteria group	Firmicutes	4.57361	45	-	ACOK01	119	4127	3854	5/14/09	5/19/17	Scaffold	The North American Consortium for Genomics of Fibrolytic Ruminal Bacteria	SAMN02471821	GCA_000174895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/895/GCA_000174895.1_ASM17489v1	19680555	FD-1
Corynebacterium kroppenstedtii	161879	PRJNA274824	274824	Terrabacteria group	Actinobacteria	2.57461	56.8	-	JYCR01	33	2231	2065	4/15/15	4/10/17	Contig	ITACYL	SAMN03333058	GCA_000971845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/845/GCA_000971845.1_Corkro_ITA105.1.0	25999560	ITA105
Acinetobacter nosocomialis Ab22222	1183155	PRJNA164597	164597	Proteobacteria	Gammaproteobacteria	4.01581	38.8	-	AKAR01	25	3976	3723	10/1/12	3/30/17	Scaffold	Broad Institute	SAMN02596916	GCA_000300635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/635/GCA_000300635.1_Acin_baum_Ab22222_V1	-	Ab22222
Streptomyces griseus subsp. griseus	67263	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.32969	72.2	-	JOBR01	166	7142	6857	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645398	GCA_000717795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/795/GCA_000717795.1_ASM71779v1	-	NRRL WC-3480
Ochrobactrum intermedium 2745-2	1444311	PRJNA233556	233556	Proteobacteria	Alphaproteobacteria	4.80018	57.6	-	JFHY01	95	4676	4430	4/2/14	4/2/17	Contig	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN02592615	GCA_000612245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/245/GCA_000612245.1_OchInt1.0	26465134	2745-2
Parachlamydia acanthamoebae	83552	PRJNA242499	242499	PVC group	Chlamydiae	3.00888	39	-	JSAM01	162	2666	2309	12/31/14	3/29/17	Contig	University of Vienna	SAMN03083484	GCA_000812225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/225/GCA_000812225.1_OEW1_v1	25069652	OEW1
Xylella fastidiosa M23	405441	PRJNA18457	18457	Proteobacteria	Gammaproteobacteria	2.57399	51.7613	chromosome:NC_010577.1/CP001011.1; plasmid pXFAS01:NC_010579.1/CP001012.1	-	2	2415	2254	4/11/08	3/30/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598408	GCA_000019765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/765/GCA_000019765.1_ASM1976v1	20601474	M23
Corynebacterium crudilactis	1652495	PRJNA321311	321311	Terrabacteria group	Actinobacteria	3.21729	51.76	chromosome:NZ_CP015622.1/CP015622.1; plasmid pCRULAC1:NZ_CP015623.1/CP015623.1; plasmid pCRULAC2:NZ_CP015624.1/CP015624.1	-	3	2985	2833	5/13/16	4/12/17	Complete Genome	Bielefeld University	SAMN04990137	GCA_001643015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/015/GCA_001643015.1_ASM164301v1	-	JZ16
Aerococcus viridans LL1	1175629	PRJNA159617	159617	Terrabacteria group	Firmicutes	1.99404	39.4	-	AJTG01	31	1849	1787	5/8/12	4/7/17	Contig	Zhejiang University	SAMN02471140	GCA_000262085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/085/GCA_000262085.1_AeroviriLL11.0	22815455	LL1
Butyrivibrio fibrisolvens WTE3004	1280699	PRJNA185716	185716	Terrabacteria group	Firmicutes	4.66543	39.9	-	AUJV01	87	3939	3761	7/10/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02440674	GCA_000424405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/405/GCA_000424405.1_ASM42440v1	-	WTE3004
Prevotella buccae	28126	PRJNA267549	267549	FCB group	Bacteroidetes/Chlorobi group	3.10903	51.2	-	JVYX01	970	2791	2195	7/10/15	4/10/17	Contig	University of Washington	SAMN03197167	GCA_001062315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/315/GCA_001062315.1_ASM106231v1	26230489	1205_PDEN
Megamonas hypermegale	158847	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.14366	33.6	-	NFIW01	54	2072	1963	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473710	GCA_002159575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/575/GCA_002159575.1_ASM215957v1	-	An288
Faecalitalea cylindroides	39483	PRJNA377666	377666	Terrabacteria group	Firmicutes	1.97179	34.7	-	NFKM01	49	2041	1948	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473642	GCA_002160375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/375/GCA_002160375.1_ASM216037v1	-	An178
Bacteroides xylanisolvens SD CC 2a	702444	PRJNA42771	42771	FCB group	Bacteroidetes/Chlorobi group	6.0502	42	-	ADMP01	305	5015	4566	3/30/10	5/18/17	Contig	J. Craig Venter Institute	SAMN00007492	GCA_000178295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/295/GCA_000178295.1_ASM17829v1	-	SD CC 2a
Candidatus Liberibacter solanacearum	556287	PRJNA259360	259360	Proteobacteria	Alphaproteobacteria	1.21136	34.9	-	JQIG01	7	1104	887	4/1/15	4/17/17	Contig	North Dakota State University	SAMN03004265	GCA_000968075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/075/GCA_000968075.1_ASM96807v1	25822188	HenneA
Acidovorax citrulli	80869	PRJNA298286	298286	Proteobacteria	Betaproteobacteria	4.82187	68.9	-	LKUW01	139	4321	4105	3/17/16	4/12/17	Contig	"Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem"	SAMN04157986	GCA_001593665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/665/GCA_001593665.1_ASM159366v1	27092114	M6
Thermococcus peptonophilus	53952	PRJNA274230	274230	Euryarchaeota	Thermococci	1.89611	51.7078	chromosome:NZ_CP014750.1/CP014750.1; plasmid unnamed:NZ_CP014751.1/CP014751.1	-	2	2078	1974	3/15/16	4/12/17	Complete Genome	Ecole Normale Superieure de Lyon	SAMN03324162	GCA_001592435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/435/GCA_001592435.1_ASM159243v1	-	OG-1
Pseudomonas syringae pv. tomato	323	PRJNA263089	263089	Proteobacteria	Gammaproteobacteria	6.25994	58.6	-	JRRA01	84	6013	5690	10/9/14	4/2/17	Scaffold	Cornell University	SAMN03093524	GCA_000765305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/305/GCA_000765305.1_ASM76530v1	-	NYS-T1
Pseudomonas savastanoi pv. phaseolicola 1644R	1079060	PRJNA72523	72523	Proteobacteria	Gammaproteobacteria	5.88868	57.9	-	AGAS01	970	5660	4948	9/9/11	5/19/17	Scaffold	University of North Carolina	SAMN02471563	GCA_000225805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/805/GCA_000225805.1_ASM22580v1	22414441	1644R
Pseudomonas coronafaciens pv. oryzae	235277	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.50266	57.9	-	LJQX01	86	5129	4848	10/20/15	4/4/17	Scaffold	University of Toronto	SAMN03976267	GCA_001400895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/895/GCA_001400895.1_PorICMP9088	-	ICMP9088
Corynebacterium ammoniagenes DSM 20306	649754	PRJNA38319	38319	Terrabacteria group	Actinobacteria	2.76417	55.6	-	ADNS01	26	2529	2432	5/11/10	4/7/17	Scaffold	WUGSC	SAMN00189098	GCA_000164115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/115/GCA_000164115.1_ASM16411v1	-	DSM 20306
Prevotella oris F0302	649760	PRJNA38329	38329	FCB group	Bacteroidetes/Chlorobi group	3.25164	43.8	-	ACUZ02	18	2843	2575	8/11/09	4/7/17	Scaffold	WUGSC	SAMN00008848	GCA_000162915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/915/GCA_000162915.1_ASM16291v1	-	F0302
Acinetobacter calcoaceticus RUH2202	575585	PRJNA38337	38337	Proteobacteria	Gammaproteobacteria	3.88179	38.7	-	ACPK01	15	3720	3559	10/21/09	3/30/17	Scaffold	Broad Institute	SAMN02463728	GCA_000162035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/035/GCA_000162035.1_ASM16203v1	23144699	RUH2202
Acinetobacter johnsonii CIP 64.6	1217663	PRJNA183324	183324	Proteobacteria	Gammaproteobacteria	3.6084	41.5	-	APON01	11	3548	3294	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN01828184	GCA_000368045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/045/GCA_000368045.1_Acin_john_CIP_64_6_V1	-	CIP 64.6
Acinetobacter junii CIP 107470	1217666	PRJNA183291	183291	Proteobacteria	Gammaproteobacteria	3.78235	38.6	-	APPS01	25	3619	3280	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN01087850	GCA_000368665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/665/GCA_000368665.1_Acin_grim_CIP_107470_V1	-	CIP 107470
Thermococcus gorgonarius	71997	PRJNA274230	274230	Euryarchaeota	Thermococci	1.67412	51.7	chromosome:NZ_CP014855.1/CP014855.1	-	1	1869	1774	7/5/17	7/7/17	Complete Genome	Ecole Normale Superieure de Lyon	SAMN03324159	GCA_002214385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/385/GCA_002214385.1_ASM221438v1	-	W-12
Acinetobacter lwoffii SH145	575588	PRJNA38343	38343	Proteobacteria	Gammaproteobacteria	3.481	42.8	-	ACPN01	76	3246	3017	10/23/09	3/30/17	Scaffold	Broad Institute	SAMN02463731	GCA_000162095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/095/GCA_000162095.1_ASM16209v1	23144699	SH145
Prevotella veroralis DSM 19559 = JCM 6290	1122993	PRJDB555	243138	FCB group	Bacteroidetes/Chlorobi group	2.83445	41.8	-	BAIP01	65	2441	1887	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00011136	GCA_000613325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/325/GCA_000613325.1_ASM61332v1	-	JCM 6290
Vibrio fluvialis PG41	1336752	PRJNA205118	205118	Proteobacteria	Gammaproteobacteria	5.34355	48.1	-	ASXS01	49	5211	5024	7/2/13	4/1/17	Contig	Institute of Microbial Technology	SAMN02469998	GCA_000417625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/625/GCA_000417625.1_Vibrio_fluvalis_PG41	23895343	PG41
Pantoea stewartii	66269	PRJNA292332	292332	Proteobacteria	Gammaproteobacteria	4.48641	53.9	-	LIIU01	27	4201	4037	10/13/15	4/4/17	Scaffold	Agriculture and Agri-Food Canada	SAMN03968918	GCA_001310295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/295/GCA_001310295.1_Pantoea_stewartii_S301_1.0	-	S301
[Clostridium] innocuum	1522	PRJNA259312	259312	Terrabacteria group	Firmicutes	4.51388	44	-	JQIF01	483	4364	4107	10/6/14	4/9/17	Contig	Chang Gung Memorial Hospital	SAMN03003651	GCA_000763955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/955/GCA_000763955.1_ASM76395v1	-	AN88
Cronobacter turicensis z610	1390380	PRJNA215839	215839	Proteobacteria	Gammaproteobacteria	4.18291	58	-	AXDM01	270	4094	3798	10/29/13	4/9/17	Contig	"OARSA, CFSAN"	SAMN02319257	GCA_000486025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/025/GCA_000486025.1_Etur610	24309739	z610
Methylotenera versatilis 7	1101193	PRJNA195837	195837	Proteobacteria	Betaproteobacteria	2.50317	43	-	JUGF01	3	2386	2303	12/9/14	6/20/17	Contig	DOE Joint Genome Institute	SAMN02746044	GCA_000799165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/165/GCA_000799165.1_ASM79916v1	25657279	7
Bacillus smithii NBRC 15311	1220590	PRJDB409	172608	Terrabacteria group	Firmicutes	3.24475	40.4	-	BCVY01	142	3189	2996	2/27/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046984	GCA_001591985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/985/GCA_001591985.1_ASM159198v1	-	NBRC 15311
Cylindrospermopsis raciborskii ITEP-A1	1810942	PRJNA314253	314253	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.60584	40.1	-	LUBZ01	195	3289	3058	3/10/16	4/12/17	Contig	University of Sao Paulo	SAMN04530926	GCA_001586755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/755/GCA_001586755.1_ASM158675v1	27151783	ITEP-A1
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.19557	51.7	chromosome:NZ_CP017257.1/CP017257.1	-	1	2535	2176	3/31/17	4/6/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05560575	GCA_002075815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/815/GCA_002075815.1_ASM207581v1	-	COL-201504-11
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.17341	51.7	chromosome:NZ_CP016627.1/CP016627.1	-	1	2517	2179	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883376	GCA_001697305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/305/GCA_001697305.1_ASM169730v1	-	M22718
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.17388	51.7	chromosome:NZ_CP016645.1/CP016645.1	-	1	2516	2179	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883372	GCA_001697325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/325/GCA_001697325.1_ASM169732v1	-	M12752
Vibrio mimicus SX-4	756012	PRJNA47421	47421	Proteobacteria	Gammaproteobacteria	4.27361	46.3	-	ADOO01	31	4028	3799	7/18/11	5/19/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02470633	GCA_000222145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/145/GCA_000222145.1_ASM22214v1	21731695	SX-4
Komagataeibacter xylinus NBRC 15237	1220579	PRJDB398	172597	Proteobacteria	Alphaproteobacteria	3.62598	57	-	BCTP01	156	65	52	2/18/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046750	GCA_001571345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/345/GCA_001571345.1_ASM157134v1	-	NBRC 15237
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.1727	51.7	chromosome:NZ_CP016649.1/CP016649.1	-	1	2504	2166	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883374	GCA_001697405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/405/GCA_001697405.1_ASM169740v1	-	M22189
Vibrio furnissii CIP 102972	675811	PRJNA40497	40497	Proteobacteria	Gammaproteobacteria	4.95866	50.6	-	ACZP01	24	4692	4492	10/6/09	5/19/17	Contig	"Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR)"	SAMN02393822	GCA_000176175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/175/GCA_000176175.1_ASM17617v1	-	CIP 102972
Prevotella timonensis CRIS 5C-B1	679189	PRJNA40667	40667	FCB group	Bacteroidetes/Chlorobi group	2.79607	42.2	-	ADEF01	72	2291	2166	12/15/09	4/7/17	Contig	JCVI	SAMN00003362	GCA_000177055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/055/GCA_000177055.1_ASM17705v1	-	CRIS 5C-B1
Prevotella buccalis DNF00985	1401078	PRJNA219677	219677	FCB group	Bacteroidetes/Chlorobi group	2.75648	45.7	-	JRNP01	102	2262	2132	9/26/14	4/9/17	Contig	J. Craig Venter Institute	SAMN02850977	GCA_000759265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/265/GCA_000759265.1_04_NF40_HMP2140v01	-	DNF00985
Prevotella amnii CRIS 21A-A	679191	PRJNA40671	40671	FCB group	Bacteroidetes/Chlorobi group	2.41556	36.5	-	ADFQ01	117	2110	1957	9/21/10	4/7/17	Contig	JCVI	SAMN00003364	GCA_000177355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/355/GCA_000177355.1_ASM17735v1	-	CRIS 21A-A
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.17351	51.7	chromosome:NZ_CP016650.1/CP016650.1	-	1	2520	2177	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883361	GCA_001697425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/425/GCA_001697425.1_ASM169742v1	-	M07149
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.17258	51.7	chromosome:NZ_CP016651.1/CP016651.1	-	1	2517	2181	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883450	GCA_001697445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/445/GCA_001697445.1_ASM169744v1	-	M25474
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.17361	51.7	chromosome:NZ_CP016655.1/CP016655.1	-	1	2517	2179	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883385	GCA_001697525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/525/GCA_001697525.1_ASM169752v1	-	M22772
Pseudomonas amygdali pv. morsprunorum str. M302280	629259	PRJNA33203	33203	Proteobacteria	Gammaproteobacteria	6.0917	58.5	-	AEAE01	445	5739	5215	7/8/10	5/19/17	Scaffold	University of North Carolina at Chapel Hill	SAMN02471318	GCA_000145745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/745/GCA_000145745.1_ASM14574v1	21799664	M302280
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.1685	51.7	chromosome:NZ_CP016656.1/CP016656.1	-	1	2508	2178	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883384	GCA_001697545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/545/GCA_001697545.1_ASM169754v1	-	M22769
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.17536	51.7	chromosome:NZ_CP016658.1/CP016658.1	-	1	2514	2178	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883405	GCA_001697585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/585/GCA_001697585.1_ASM169758v1	-	M24730
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.17243	51.7	chromosome:NZ_CP016659.1/CP016659.1	-	1	2512	2174	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883389	GCA_001697605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/605/GCA_001697605.1_ASM169760v1	-	M22801
Cupriavidus necator A5-1	1304882	PRJNA195774	195774	Proteobacteria	Betaproteobacteria	9.74138	65	-	JQLI01	9	9068	8333	8/28/14	4/2/17	Contig	DOE Joint Genome Institute	SAMN02745774	GCA_000744095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/095/GCA_000744095.1_ASM74409v1	-	17-Jan
Bacillus cytotoxicus	580165	PRJNA394959	394959	Terrabacteria group	Firmicutes	4.34572	35.9	-	NOKD01	3	4549	4048	8/14/17	8/14/17	Contig	University of Zurich	SAMN07367962	GCA_002250905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/905/GCA_002250905.1_ASM225090v1	-	CH_25
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.17198	51.7	chromosome:NZ_CP016661.1/CP016661.1	-	1	2511	2172	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883437	GCA_001697645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/645/GCA_001697645.1_ASM169764v1	-	M25438
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.17372	51.7	chromosome:NZ_CP016662.1/CP016662.1	-	1	2511	2172	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883396	GCA_001697665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/665/GCA_001697665.1_ASM169766v1	-	M23413
Lactobacillus amylovorus GRL 1112	695560	PRJNA42073	42073	Terrabacteria group	Firmicutes	2.12667	38.076	chromosome:NC_014724.1/CP002338.1; plasmid plasmid1:NC_015319.1/CP002612.1; plasmid plasmid2:NC_015322.1/CP002613.1	-	3	2175	1985	11/19/10	4/10/17	Chromosome	"Helsinki University, Finland"	SAMN02603306	GCA_000182855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/182/855/GCA_000182855.2_ASM18285v1	21131492	GRL 1112
[Clostridium] cf. saccharolyticum K10	717608	PRJEA45855	45855	Terrabacteria group	Firmicutes	3.76978	50.2	chromosome:FP929037.1	-	1	3124	3073	3/25/10	2/27/15	Chromosome	metaHIT	SAMEA2272117	GCA_000210535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/535/GCA_000210535.1_ASM21053v1	-	K10
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.17289	51.7	chromosome:NZ_CP016663.1/CP016663.1	-	1	2517	2176	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883377	GCA_001697685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/685/GCA_001697685.1_ASM169768v1	-	M22722
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.168	51.7	chromosome:NZ_CP016664.1/CP016664.1	-	1	2497	2159	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883408	GCA_001697705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/705/GCA_001697705.1_ASM169770v1	-	M25070
Parascardovia denticolens F0305	641144	PRJNA42549	42549	Terrabacteria group	Actinobacteria	1.89712	58.3	-	ADEB01	9	1611	1510	3/30/10	4/7/17	Scaffold	Broad Institute	SAMN02463844	GCA_000163835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/835/GCA_000163835.1_Paras_denticolens_F0305	-	F0305
Turicibacter sanguinis	154288	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.12229	34.2	-	CYXW01	43	2993	2875	10/1/15	4/11/17	Contig	SC	SAMEA3545230	GCA_001404715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/715/GCA_001404715.1_13414_6_5	-	2789STDY5608821
Prevotella oulorum	28136	PRJEB19556	376315	FCB group	Bacteroidetes/Chlorobi group	2.84094	46.8	-	FUXK01	63	2565	2350	3/4/17	3/11/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745202	GCA_900167385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/385/GCA_900167385.1_IMG-taxon_2585428083_annotated_assembly	-	ATCC 43324
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.17404	51.7	chromosome:NZ_CP016666.1/CP016666.1	-	1	2514	2174	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883441	GCA_001697745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/745/GCA_001697745.1_ASM169774v1	-	M25462
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.17374	51.7	chromosome:NZ_CP016667.1/CP016667.1	-	1	2510	2171	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883452	GCA_001697765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/765/GCA_001697765.1_ASM169776v1	-	M27559
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.17015	51.7	chromosome:NZ_CP016668.1/CP016668.1	-	1	2497	2165	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883448	GCA_001697785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/785/GCA_001697785.1_ASM169778v1	-	M25472
Acinetobacter haemolyticus CIP 64.3	1217659	PRJNA183265	183265	Proteobacteria	Gammaproteobacteria	3.51308	39.7	-	APQQ01	15	3347	3159	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN01828153	GCA_000369065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/065/GCA_000369065.1_Acin_haem_CIP_64_3_V1	-	CIP 64.3
Prevotella nigrescens F0103	702439	PRJNA43119	43119	FCB group	Bacteroidetes/Chlorobi group	3.02174	42.7	-	ADGJ01	131	2730	2474	2/1/13	4/8/17	Contig	Broad Institute	SAMN02595377	GCA_000336235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/235/GCA_000336235.1_Prev_nigr_F0103_V1	-	F0103
Helicobacter suis	104628	PRJDB4570	315251	Proteobacteria	delta/epsilon subdivisions	1.6348	40	-	BDAO01	42	1695	1536	3/12/16	4/5/17	Scaffold	"Kitasato Institute for Life Sciences, Kitasato University"	SAMD00047008	GCA_001653055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/055/GCA_001653055.1_ASM165305v1	-	SNTW101
Odoribacter splanchnicus	28118	PRJNA377666	377666	FCB group	Bacteroidetes/Chlorobi group	4.69679	43.5	-	NFIM01	76	4014	3847	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473721	GCA_002159415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/415/GCA_002159415.1_ASM215941v1	-	An39
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.16831	51.7	chromosome:NZ_CP016669.1/CP016669.1	-	1	2499	2162	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883382	GCA_001697805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/805/GCA_001697805.1_ASM169780v1	-	M22759
Pantoea vagans	470934	PRJNA254769	254769	Proteobacteria	Gammaproteobacteria	4.5987	55.3	-	JPKP01	8	4229	4074	9/23/14	4/9/17	Scaffold	Forestry and Agricultural Biotechnology Institute	SAMN02905155	GCA_000757435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/435/GCA_000757435.1_MP7assem4	26937267	MP7
Lysinibacillus fusiformis ZC1	714961	PRJNA43687	43687	Terrabacteria group	Firmicutes	4.64942	37.3	-	ADJR01	113	4602	4406	6/21/10	5/19/17	Contig	University of Arizona	SAMN02472185	GCA_000178135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/135/GCA_000178135.1_ASM17813v1	20952126	ZC1
Komagataeibacter hansenii	436	PRJNA313935	313935	Proteobacteria	Alphaproteobacteria	3.34343	59.9	-	LUCI01	108	3015	2863	5/17/16	4/5/17	Scaffold	University of Texas at Austin	SAMN04526068	GCA_001645805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/805/GCA_001645805.1_ASM164580v1	-	AY201
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.16799	51.7	chromosome:NZ_CP016670.1/CP016670.1	-	1	2508	2167	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883421	GCA_001697825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/825/GCA_001697825.1_ASM169782v1	-	M25087
Acinetobacter oleivorans	1148157	PRJNA243021	243021	Proteobacteria	Gammaproteobacteria	3.76647	38.6	-	JHQK01	32	3555	3093	12/17/14	4/21/17	Contig	Hasselt University	SAMN02712087	GCA_000803285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/285/GCA_000803285.1_AciOleGF1_1.0	25657268	PF1
Thermus scotoductus KI2	1382313	PRJNA214298	214298	Terrabacteria group	Deinococcus-Thermus	2.47568	65.5	-	JQLJ01	2	2650	2401	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02744999	GCA_000744155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/155/GCA_000744155.1_ASM74415v1	-	KI2
Mycoplasma ovipneumoniae	29562	PRJNA253501	253501	Terrabacteria group	Tenericutes	1.01812	28.8	-	JOTE01	70	765	674	8/26/16	4/5/17	Scaffold	Southwest University for Nationalities	SAMN02870871	GCA_001715035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/035/GCA_001715035.1_ASM171503v1	-	TC1
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.17293	51.7	chromosome:NZ_CP016672.1/CP016672.1	-	1	2494	2114	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883395	GCA_001697865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/865/GCA_001697865.1_ASM169786v1	-	M22828
Prevotella bryantii	77095	PRJNA396820	396820	FCB group	Bacteroidetes/Chlorobi group	3.44329	38.8	-	NPJF01	74	2769	2632	8/14/17	8/16/17	Contig	University of Ljubljana	SAMN07431222	GCA_002251425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/425/GCA_002251425.1_ASM225142v1	-	TC1-1
Leptospira santarosai str. 2000027870	1001592	PRJNA65051	65051	Spirochaetes	Spirochaetia	3.91434	41.7	-	AFLX02	35	3883	3551	6/7/11	4/11/17	Contig	J. Craig Venter Institute	SAMN02436545	GCA_000216275.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/275/GCA_000216275.3_gls454039v2.0	-	2000027870
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.17312	51.7	chromosome:NZ_CP016673.1/CP016673.1	-	1	2500	2170	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883440	GCA_001697885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/885/GCA_001697885.1_ASM169788v1	-	M25459
Brevundimonas diminuta 470-4	1035191	PRJNA67195	67195	Proteobacteria	Alphaproteobacteria	3.33768	66.9	-	AMFA01	80	3296	3130	12/10/12	4/8/17	Scaffold	Washington University Genome Center	SAMN02436690	GCA_000318405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/405/GCA_000318405.1_ASM31840v1	-	470-4
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.17734	51.7	chromosome:NZ_CP016674.1/CP016674.1	-	1	2507	2168	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883373	GCA_001697905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/905/GCA_001697905.1_ASM169790v1	-	M22160
[Clostridium] clostridioforme 90B1	999409	PRJNA64869	64869	Terrabacteria group	Firmicutes	5.60215	49.1	-	AGYO01	10	5462	5133	4/19/13	5/19/17	Scaffold	Broad Institute	SAMN02596765	GCA_000371485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/485/GCA_000371485.1_Clos_clos_90B1_V1	-	90B1
Fusobacterium necrophorum subsp. funduliforme Fnf 1007	1161424	PRJNA89621	89621	Fusobacteria	Fusobacteriia	2.16682	35.1	-	ALKK01	87	2136	2051	8/27/12	3/30/17	Contig	JCVI	SAMN00829140	GCA_000292975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/975/GCA_000292975.1_FnecroFnf1007v1.0	-	Fnf 1007
Treponema phagedenis	162	PRJEB5300	240647	Spirochaetes	Spirochaetia	3.12961	39.9	-	CDNC01	51	2879	2635	1/18/15	4/10/17	Contig	SLU-GBC	SAMEA3178919	GCA_000944995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/995/GCA_000944995.1_TphV1	-	V1
[Clostridium] citroniae	358743	PRJEB17345	351566	Terrabacteria group	Firmicutes	6.04373	49.7	-	FOZH01	25	5478	5300	11/1/16	4/14/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216568	GCA_900115855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/855/GCA_900115855.1_IMG-taxon_2623620476_annotated_assembly	-	NLAE-zl-G70
Sutterella wadsworthensis 3_1_45B	742821	PRJNA46429	46429	Proteobacteria	Betaproteobacteria	2.96544	55.1	-	ADMF01	37	2550	2390	1/21/11	4/7/17	Scaffold	Broad Institute	SAMN02463869	GCA_000186505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/505/GCA_000186505.1_Sutt_wads_3_1_45B_V1	-	3_1_45B
Enterococcus saccharolyticus subsp. saccharolyticus ATCC 43076	1139996	PRJNA82535	82535	Terrabacteria group	Firmicutes	2.6385	37.1	-	AHYT01	4	2659	2542	5/31/13	4/10/17	Scaffold	Broad Institute	SAMN02596896	GCA_000407005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/005/GCA_000407005.1_Ente_sacc_ATCC43076_V1	-	ATCC 43076
Methylobacter tundripaludum 31/32	1408451	PRJNA223142	223142	Proteobacteria	Gammaproteobacteria	5.04755	49.2	-	JPOH01	2	4574	4355	7/24/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02745464	GCA_000733835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/835/GCA_000733835.1_ASM73383v1	25767239	31/32
Streptococcus parasanguinis ATCC 903	888048	PRJNA53003	53003	Terrabacteria group	Firmicutes	2.13153	41.8	-	AEVE01	14	2058	1960	2/1/11	3/30/17	Scaffold	Baylor College of Medicine	SAMN00253299	GCA_000187505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/505/GCA_000187505.1_ASM18750v1	-	ATCC 903
Eggerthella lenta 1_1_60AFAA	742768	PRJNA46413	46413	Terrabacteria group	Actinobacteria	3.74829	63.9	-	ADLX01	42	3284	3030	10/3/14	4/9/17	Scaffold	Broad Institute	SAMN00103544	GCA_000763035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/035/GCA_000763035.1_Egge_lent_1_1_60AFAA_V1	-	1_1_60AFAA
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.16979	51.7	chromosome:NZ_CP016675.1/CP016675.1	-	1	2502	2164	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883364	GCA_001697925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/925/GCA_001697925.1_ASM169792v1	-	M07161
Phascolarctobacterium succinatutens	626940	PRJNA321218	321218	Terrabacteria group	Firmicutes	2.40681	47	-	MNTG01	48	2251	2150	12/23/16	12/23/16	Scaffold	None	SAMN05717290	GCA_001916865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/865/GCA_001916865.1_ASM191686v1	27819664	-
Bacteroides clarus	626929	PRJNA377666	377666	FCB group	Bacteroidetes/Chlorobi group	4.21757	45.2	-	NFII01	44	3568	3419	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473725	GCA_002161685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/685/GCA_002161685.1_ASM216168v1	-	An43
Achromobacter piechaudii HLE	1156919	PRJNA86071	86071	Proteobacteria	Betaproteobacteria	6.8922	65.1	-	ALJE01	183	6371	6189	8/10/12	5/18/17	Contig	University of Illinois at Chicago	SAMN01083790	GCA_000286415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/415/GCA_000286415.1_ASM28641v1	23105084	HLE
Prevotella denticola DSM 20614 = JCM 13449	1122982	PRJDB574	243150	FCB group	Bacteroidetes/Chlorobi group	3.11175	50	-	BAJG01	82	2577	2059	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00003335	GCA_000613585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/585/GCA_000613585.1_ASM61358v1	-	JCM 13449
Halalkalicoccus jeotgali B3	795797	PRJNA64955	64955	Euryarchaeota	Halobacteria	3.6375	62.6	-	AXZD01	35	3774	3622	10/25/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440736	GCA_000485535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/535/GCA_000485535.1_ASM48553v1	-	B3
Isoptericola variabilis	139208	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.43947	65.1	-	JUPW01	193	2050	1958	7/10/15	4/10/17	Contig	University of Washington	SAMN03198078	GCA_001059235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/235/GCA_001059235.1_ASM105923v1	26230489	871_IVAR
Pseudomonas fulva NBRC 16637 = DSM 17717	1215102	PRJDB210	171629	Proteobacteria	Gammaproteobacteria	4.76823	61.8	-	BBIQ01	46	4331	4170	7/10/14	4/9/17	Contig	National Institute of Technology and Evaluation	SAMD00018425	GCA_000730565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/565/GCA_000730565.1_ASM73056v1	-	NBRC 16637
Peptoanaerobacter stomatis	796937	PRJNA49891	49891	Terrabacteria group	Firmicutes	2.59672	30.5	-	AFZG01	92	2320	2139	12/14/11	4/7/17	Scaffold	Broad Institute	SAMN02463879	GCA_000238135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/135/GCA_000238135.1_Eubact_bact_CM5_V1	-	CM5
Sphingobium chlorophenolicum NBRC 16172	1219044	PRJDB323	172291	Proteobacteria	Alphaproteobacteria	4.74695	64.3	-	BCZC01	334	4502	4343	3/11/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046714	GCA_001598515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/515/GCA_001598515.1_ASM159851v1	-	NBRC 16172
Corynebacterium variabile	1727	PRJEB11834	312629	Terrabacteria group	Actinobacteria	3.18555	67.3	-	FAUH01	66	2938	2734	2/19/16	4/12/17	Contig	INRA GRIGNON	SAMEA3672201	GCA_900015285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/285/GCA_900015285.1_Genome_sequence_of_Corynebacterium_variabile_Mu292	-	Mu292
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.16819	51.7	chromosome:NZ_CP016676.1/CP016676.1	-	1	2510	2165	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883451	GCA_001697945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/945/GCA_001697945.1_ASM169794v1	-	M25476
Agrobacterium sp. 10MFCol1.1	1150775	PRJNA182456	182456	Proteobacteria	Alphaproteobacteria	5.4392	58.6	-	ARLJ01	28	5240	5082	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440986	GCA_000381165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/165/GCA_000381165.1_ASM38116v1	-	10MFCol1.1
Haemophilus parainfluenzae HK262	1095745	PRJNA75173	75173	Proteobacteria	Gammaproteobacteria	2.10781	39.2	-	AJMW01	68	2036	1954	4/23/12	3/30/17	Contig	J. Craig Venter Institute	SAMN00761858	GCA_000259485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/485/GCA_000259485.1_HparainfluenzaeHK262v1.0	-	HK262
Prevotella histicola JCM 15637 = DNF00424	1236504	PRJNA219666	219666	FCB group	Bacteroidetes/Chlorobi group	3.05996	41.2	-	JRNJ01	109	2543	2400	9/26/14	4/9/17	Contig	J. Craig Venter Institute	SAMN02850967	GCA_000759075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/075/GCA_000759075.1_04_NF40_HMP2132v01	-	DNF00424
Haladaptatus paucihalophilus DX253	797209	PRJEB18343	355739	Euryarchaeota	Halobacteria	4.2837	61.8	-	FRAN01	14	4282	4190	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444342	GCA_900142335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/335/GCA_900142335.1_IMG-taxon_2698536698_annotated_assembly	-	DX253
Rahnella aquatilis	34038	PRJNA247588	247588	Proteobacteria	Gammaproteobacteria	5.37089	52.2	-	JUHL01	45	4923	4723	12/9/14	4/10/17	Scaffold	DOE Joint Genome Institute	SAMN02787061	GCA_000799815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/815/GCA_000799815.1_ASM79981v1	-	OV588
Vibrio tubiashii NCIMB 1337 = ATCC 19106	866909	PRJNA50651	50651	Proteobacteria	Gammaproteobacteria	5.32829	44.8	-	AHHF01	125	4933	4808	4/19/12	5/19/17	Contig	Plymouth Marine Laboratory	SAMN02470815	GCA_000259295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/295/GCA_000259295.1_ASM25929v1	21677855	NCIMB 1337
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.17311	51.7	chromosome:NZ_CP016677.1/CP016677.1	-	1	2499	2164	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883439	GCA_001697965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/965/GCA_001697965.1_ASM169796v1	-	M25456
Prevotella disiens FB035-09AN	866771	PRJNA51065	51065	FCB group	Bacteroidetes/Chlorobi group	3.00383	40.2	-	AEDO01	78	2681	2419	8/10/10	4/7/17	Contig	J. Craig Venter Institute	SAMN00100749	GCA_000179675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/675/GCA_000179675.1_ASM17967v1	-	FB035-09AN
Aerococcus urinae NBRC 15544 = CCUG 36881	1216979	PRJDB241	171909	Terrabacteria group	Firmicutes	1.9469	42.6	-	BCQH01	26	1787	1707	1/29/16	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00046316	GCA_001544335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/335/GCA_001544335.1_ASM154433v1	-	NBRC 15544
Veillonella atypica	39777	PRJNA272125	272125	Terrabacteria group	Firmicutes	2.09885	38.9	-	LRQT01	94	1938	1840	2/2/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN03956213	GCA_001546845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/845/GCA_001546845.1_ASM154684v1	-	CMW7756B
Streptococcus infantis SK1076	1005705	PRJNA65583	65583	Terrabacteria group	Firmicutes	1.74406	39.5	-	AFNN01	30	1811	1635	5/27/11	3/30/17	Contig	J. Craig Venter Institute	SAMN00621697	GCA_000215385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/385/GCA_000215385.2_ASM21538v1	-	SK1076
Vibrio scophthalmi LMG 19158	870967	PRJNA51215	51215	Proteobacteria	Gammaproteobacteria	4.85429	44.6	-	AFWE01	230	4541	4330	8/4/11	5/19/17	Contig	FDA	SAMN02951901	GCA_000222585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/585/GCA_000222585.2_ASM22258v1	21930677	LMG 19158
Capnocytophaga ochracea str. Holt 25	1125719	PRJNA78899	78899	FCB group	Bacteroidetes/Chlorobi group	2.65376	39.5	-	AKFV01	42	2335	2208	7/10/12	4/7/17	Contig	J. Craig Venter Institute	SAMN00792203	GCA_000277585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/585/GCA_000277585.1_CochraceaHolt25v1.0	-	Holt 25
Prevotella oralis CC98A	1073367	PRJNA71567	71567	FCB group	Bacteroidetes/Chlorobi group	2.99016	44.7	-	AZJG01	6	2474	2324	12/10/13	4/9/17	Scaffold	Broad Institute	SAMN01162055	GCA_000507905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/507/905/GCA_000507905.1_Prev_oral_CC98A_V1	-	CC98A
Actinomyces oris	544580	PRJNA327886	327886	Terrabacteria group	Actinobacteria	2.93032	68.2	-	MAUB01	485	2648	2209	7/9/16	4/5/17	Contig	the National Laboratory of Genomics for Biodiversity	SAMN05361159	GCA_001682715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/715/GCA_001682715.1_ASM168271v1	-	MG-1
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.18956	51.7	chromosome:NZ_CP016678.1/CP016678.1	-	1	2532	2195	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883430	GCA_001697985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/985/GCA_001697985.1_ASM169798v1	-	M25419
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.1729	51.7	chromosome:NZ_CP016679.1/CP016679.1	-	1	2518	2178	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883378	GCA_001698005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/005/GCA_001698005.1_ASM169800v1	-	M22740
Streptococcus pseudoporcinus	361101	PRJEB16023	371377	Terrabacteria group	Firmicutes	2.04084	37.4	-	FMWC01	44	1998	1846	2/6/17	4/17/17	Contig	UNIVERSITY OF CAMBRDGE	SAMEA4506883	GCA_900102825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/825/GCA_900102825.1_SS-607	-	-
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.1739	51.7	chromosome:NZ_CP016680.1/CP016680.1	-	1	2501	2108	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883394	GCA_001698025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/025/GCA_001698025.1_ASM169802v1	-	M22822
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.19374	51.7	chromosome:NZ_CP016644.1/CP016644.1	-	1	2544	2202	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883365	GCA_001698045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/045/GCA_001698045.1_ASM169804v1	-	M07162
Prevotella micans DSM 21469 = JCM 16134	1122987	PRJNA169761	169761	FCB group	Bacteroidetes/Chlorobi group	2.43529	45.5	-	AREK01	50	2023	1897	4/19/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441704	GCA_000373705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/705/GCA_000373705.1_ASM37370v1	-	DSM 21469
Staphylococcus simulans ACS-120-V-Sch1	883166	PRJNA52131	52131	Terrabacteria group	Firmicutes	2.6696	36.2	-	AGZX01	9	2544	2409	11/6/12	4/8/17	Scaffold	Broad Institute	SAMN02463891	GCA_000314755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/755/GCA_000314755.2_Stap_simu_ACS-120-V-SCH1_V1	-	ACS-120-V-Sch1
Myroides odoratimimus CCUG 12901	883152	PRJNA52193	52193	FCB group	Bacteroidetes/Chlorobi group	4.07099	34.2	-	AGED01	3	3653	3505	1/10/12	4/10/17	Scaffold	Broad Institute	SAMN02463910	GCA_000242095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/095/GCA_000242095.1_Myro_odor_CCUG_12901_V1	-	CCUG 12901
Sphingobium yanoikuyae	13690	PRJNA239177	239177	Proteobacteria	Alphaproteobacteria	5.49984	64.3	-	JFFT01	109	5299	5078	7/16/15	4/3/17	Scaffold	China University of Geosciences	SAMN02666059	GCA_001078495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/495/GCA_001078495.1_SHJ1.0	-	SHJ
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.17583	51.7	chromosome:NZ_CP016682.1/CP016682.1	-	1	2513	2122	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883402	GCA_001698085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/085/GCA_001698085.1_ASM169808v1	-	M24705
Streptococcus parauberis KCTC 11980BP	1260132	PRJDB705	181973	Terrabacteria group	Firmicutes	2.13949	35.6	-	BANN01	38	2144	1882	11/29/12	4/5/17	Scaffold	Korea Research Institute of Bioscience and Biotechnology	SAMD00036649	GCA_000320985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/320/985/GCA_000320985.2_ASM32098v2	24092782	KCTC 11980BP
Neisseria meningitidis	487	PRJNA268105	268105	Proteobacteria	Betaproteobacteria	2.17319	51.7	chromosome:NZ_CP016684.1/CP016684.1	-	1	2500	2131	7/29/16	3/21/17	Complete Genome	NA	SAMN03203069	GCA_000787195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/195/GCA_000787195.2_ASM78719v2	-	L91543
Halomonas elongata	2746	PRJNA313376	313376	Proteobacteria	Gammaproteobacteria	3.46378	63.5	-	LWGO01	35	3265	3129	9/9/16	4/13/17	Contig	King Abdullah University of Science and Technology (KAUST)	SAMN04520142	GCA_001722495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/495/GCA_001722495.1_ASM172249v1	-	K4
Leuconostoc lactis	1246	PRJNA244961	244961	Terrabacteria group	Firmicutes	1.68817	43.4	-	JMEA01	35	1680	1606	6/17/14	4/9/17	Contig	Chungbuk National University	SAMN02730106	GCA_000709265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/265/GCA_000709265.1_CLCbio_CLC_Genomics_Workbench_6.5_of_Leuconostoc_lactis_genome	-	KACC 91922
Kingella kingae PYKK081	1150867	PRJNA85111	85111	Proteobacteria	Betaproteobacteria	2.09755	46.4	-	AJGB01	94	2142	1937	3/21/12	3/30/17	Scaffold	Los Alamos National Laboratory	SAMN02470276	GCA_000255635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/635/GCA_000255635.1_ASM25563v1	22582375	PYKK081
Acetobacter aceti NBRC 14818	887700	PRJDA52649	52649	Proteobacteria	Alphaproteobacteria	3.57769	57.3	-	BABW01	1488	3291	2929	1/19/11	4/7/17	Contig	The University of Tokyo	SAMD00036545	GCA_000193495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/495/GCA_000193495.1_ASM19349v1	21081762	NBRC 14818
Desulfovibrio africanus PCS	1262666	PRJNA182155	182155	Proteobacteria	delta/epsilon subdivisions	3.92949	61.2	-	AOSV01	45	3577	3481	3/5/13	4/8/17	Contig	Oak Ridge National Lab	SAMN01923204	GCA_000344315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/315/GCA_000344315.1_ASM34431v1	23580709	PCS
Rhodothermus marinus SG0.5JP17-171	762569	PRJNA52953	52953	FCB group	Bacteroidetes/Chlorobi group	3.32972	64.3	-	AGIV01	2	2961	2862	1/8/14	4/9/17	Contig	JGI	SAMN02597157	GCA_000565305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/305/GCA_000565305.1_ASM56530v1	-	SG0.5JP17-171
Actinomyces neuii	33007	PRJNA272090	272090	Terrabacteria group	Actinobacteria	2.34491	56.3	-	LRPJ01	30	2113	2020	2/2/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN03842029	GCA_001546135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/135/GCA_001546135.1_ASM154613v1	-	MJR8396A
Lachnoanaerobaculum saburreum F0468	1095750	PRJNA75151	75151	Terrabacteria group	Firmicutes	3.07409	36.4	-	AJGH01	143	3030	2728	4/5/12	4/7/17	Contig	J. Craig Venter Institute	SAMN00761826	GCA_000257705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/705/GCA_000257705.1_EsaburreumF0468v1.0	-	F0468
Haemophilus aegyptius	197575	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	1.92618	38.1	-	LZPH01	32	1976	1808	7/5/16	4/13/17	Scaffold	TAILORED-Treatment project	SAMN05219236	GCA_001679335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/335/GCA_001679335.1_ASM167933v1	-	CCUG 26840
Neisseria bacilliformis	267212	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	2.4	59.2	-	JVQC01	72	2327	2119	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197396	GCA_001063965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/965/GCA_001063965.1_ASM106396v1	26230489	203_NMEN
Streptococcus pseudopneumoniae SK674	1095734	PRJNA75159	75159	Terrabacteria group	Firmicutes	2.07811	39.8	-	AJKE01	109	2271	1953	4/9/12	3/30/17	Contig	J. Craig Venter Institute	SAMN00761851	GCA_000258265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/265/GCA_000258265.1_SpseudopneumoniaeSK674v1.0	-	SK674
Streptococcus cristatus	45634	PRJNA304333	304333	Terrabacteria group	Firmicutes	2.20654	42.5	-	LQRD01	44	2176	1998	3/2/16	4/5/17	Scaffold	University of Kaiserslautern	SAMN04324327	GCA_001578775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/775/GCA_001578775.1_ASM157877v1	27303717	DD08
Methylomonas denitrificans	1538553	PRJNA258394	258394	Proteobacteria	Gammaproteobacteria	5.1721	51.7	chromosome:NZ_CP014476.1/CP014476.1	-	1	4789	4559	2/22/16	4/12/17	Complete Genome	University of Alberta	SAMN02997349	GCA_000785705.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/705/GCA_000785705.2_ASM78570v2	25580993	FJG1
Streptococcus vestibularis	1343	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.01252	39.2	-	JWGP01	137	1977	1798	7/10/15	4/10/17	Contig	University of Washington	SAMN03196967	GCA_001068405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/405/GCA_001068405.1_ASM106840v1	26230489	1005_STHE
Methylomonas methanica	421	PRJNA315270	315270	Proteobacteria	Gammaproteobacteria	5.02327	51.7	-	LUUF01	115	4639	4432	5/16/16	4/12/17	Contig	Ghent University	SAMN04555161	GCA_001644045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/045/GCA_001644045.1_ASM164404v1	-	NCIMB 11130
Lactobacillus oris DSM 4864	1423779	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.03177	50	-	AZGE01	75	1941	1837	11/6/15	4/11/17	Contig	Shanghai Majorbio	SAMN02369408	GCA_001434465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/465/GCA_001434465.1_ASM143446v1	26415554	DSM 4864
Citrobacter freundii	546	PRJNA293024	293024	Proteobacteria	Gammaproteobacteria	5.08032	51.7	chromosome:NZ_CP012554.1/CP012554.1	-	1	5065	4664	9/11/15	4/4/17	Complete Genome	Beijing Institute of Microbiology and Epidemiology	SAMN03996567	GCA_001281005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/005/GCA_001281005.1_ASM128100v1	-	P10159
Xanthomonas perforans	442694	PRJNA276609	276609	Proteobacteria	Gammaproteobacteria	5.30419	64.6	-	JZVA01	70	4776	4463	5/18/15	4/3/17	Contig	Universidade de Sao Paulo	SAMN03378974	GCA_001009365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/365/GCA_001009365.1_v1	26089818	Xp5-6
Dietzia cinnamea	321318	PRJNA312284	312284	Terrabacteria group	Actinobacteria	4.13997	67.6	-	LSTT01	407	3864	3595	5/13/16	4/12/17	Scaffold	Institute of Microbial Technology	SAMN04496896	GCA_001643175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/175/GCA_001643175.1_ASM164317v1	-	CD11_5
Xanthomonas vesicatoria ATCC 35937	925775	PRJNA60019	60019	Proteobacteria	Gammaproteobacteria	5.53109	64.1	-	AEQV01	296	5027	4484	3/9/11	6/15/17	Contig	University of Florida	SAMN02471773	GCA_000192025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/025/GCA_000192025.2_ASM19202v1	21396108	ATCC 35937
Lactobacillus coryniformis subsp. torquens DSM 20004 = KCTC 3535	1423822	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.78328	42.9	-	AZDC01	410	2681	2561	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369375	GCA_001435425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/425/GCA_001435425.1_ASM143542v1	26415554	DSM 20004
Lactobacillus animalis	1605	PRJNA337943	337943	Terrabacteria group	Firmicutes	1.94066	41.1	-	MCNR01	87	1893	1740	8/16/16	4/13/17	Contig	RTI International	SAMN05514149	GCA_001705475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/475/GCA_001705475.1_ASM170547v1	-	P38
Aeromonas caviae	648	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.55501	61.7	-	JTBH01	1	4143	3687	11/14/14	7/6/17	Contig	US Food and Drug Administration 	SAMN02934527	GCA_000783715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/715/GCA_000783715.1_ASM78371v1	-	FDAARGOS_75
Streptobacillus moniliformis	34105	PRJNA319313	319313	Fusobacteria	Fusobacteriia	1.62011	26.1	-	LWQY01	173	1502	1402	6/3/16	4/5/17	Contig	Robert Koch Institute	SAMN04885468	GCA_001655875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/875/GCA_001655875.1_ASM165587v1	-	IPDH 144/80
Neisseria meningitidis	487	PRJNA235933	235933	Proteobacteria	Betaproteobacteria	2.18767	51.7	chromosome:NZ_CP007667.1/CP007667.1	-	1	2516	2178	6/19/15	3/21/17	Complete Genome	Griffith University	SAMN02595590	GCA_001029815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/815/GCA_001029815.1_ASM102981v1	25845594	B6116/77
Neisseria meningitidis	487	PRJNA260345	260345	Proteobacteria	Betaproteobacteria	2.19527	51.7	chromosome:NZ_CP009418.1/CP009418.1	-	1	2565	2217	12/9/14	3/21/17	Complete Genome	University of Pittsburgh	SAMN03020302	GCA_000800235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/235/GCA_000800235.1_ASM80023v1	-	NM3686
Fructobacillus fructosus	1631	PRJDB3977	288288	Terrabacteria group	Firmicutes	1.48594	44.6	-	BBXR01	87	1551	1437	6/25/15	4/10/17	Contig	"Faculty of Bioindustry, Tokyo University of Agriculture"	SAMD00031992	GCA_001047095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/095/GCA_001047095.1_ASM104709v1	26715526	NRIC 1058
Xylanimonas cellulosilytica	186189	PRJNA267549	267549	Terrabacteria group	Actinobacteria	4.83872	51.5	-	JWEC01	985	-	-	7/10/15	7/13/16	Scaffold	University of Washington	SAMN03197032	GCA_001068625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/625/GCA_001068625.1_ASM106862v1	26230489	107_XCEL
Meiothermus ruber H328	1297799	PRJDB858	191157	Terrabacteria group	Deinococcus-Thermus	3.02929	63.5	-	BAOR01	1	3017	2857	3/6/13	4/10/17	Scaffold	"Division of Applied Life Sciences, Graduate School of Life and Environmental Sciences, Kyoto Prefectural University"	SAMD00036668	GCA_000346125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/125/GCA_000346125.2_ASM34612v2	23640376	H328
Neisseria meningitidis M7124	1095685	PRJNA260327	260327	Proteobacteria	Betaproteobacteria	2.17948	51.7	chromosome:NZ_CP009419.1/CP009419.1	-	1	2519	2176	12/9/14	3/21/17	Complete Genome	University of Pittsburgh	SAMN03020254	GCA_000800275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/275/GCA_000800275.1_ASM80027v1	-	M7124
Leuconostoc pseudomesenteroides	33968	PRJNA352459	352459	Terrabacteria group	Firmicutes	2.05883	39.1	-	MPHO01	201	2226	1847	3/27/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981484	GCA_002072475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/475/GCA_002072475.1_ASM207247v1	28217118	LMGH83
Geodermatophilus obscurus	1861	PRJEB18446	356026	Terrabacteria group	Actinobacteria	5.23858	74.3	-	FRDM01	112	5036	4725	12/3/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660350	GCA_900143215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/215/GCA_900143215.1_IMG-taxon_2599185272_annotated_assembly	-	DSM 43162
Saccharomonospora viridis	1852	PRJEB17277	351473	Terrabacteria group	Actinobacteria	4.30821	67.4	-	FOWS01	12	3943	3822	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02982918	GCA_900115515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/515/GCA_900115515.1_IMG-taxon_2606217201_annotated_assembly	-	ATCC 33517
Neisseria meningitidis	487	PRJNA260446	260446	Proteobacteria	Betaproteobacteria	2.18323	51.7	chromosome:NZ_CP009422.1/CP009422.1	-	1	2526	2119	12/9/14	4/11/17	Complete Genome	University of Pittsburgh	SAMN03022902	GCA_000800415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/415/GCA_000800415.1_ASM80041v1	-	M10208
Lactobacillus farciminis	1612	PRJDB4091	301427	Terrabacteria group	Firmicutes	2.36421	35.7	-	BCLJ01	58	2344	2057	11/5/15	4/11/17	Contig	"ARSOA Research & Development center, AOB Keioh Group Corporation"	SAMD00035848	GCA_001485255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/255/GCA_001485255.1_ASM148525v1	26769925	NBRC 111452
Kytococcus sedentarius	1276	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.45281	66.4	-	JVNV01	76	2142	2021	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197455	GCA_001064185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/185/GCA_001064185.1_ASM106418v1	26230489	262_KSED
Acidithiobacillus ferrivorans	160808	PRJEB5721	248814	Proteobacteria	Acidithiobacillia	3.43367	56.4	-	CCCS02	82	3557	3236	6/25/14	4/9/17	Contig	Genoscope CEA	SAMEA3139097	GCA_000750615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/615/GCA_000750615.1_ATN_AFERRI_PRJEB5721	-	CF27
Lactobacillus fructivorans	1614	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.38073	38.9	-	JQBI01	47	1380	1281	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02797779	GCA_001436935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/935/GCA_001436935.1_ASM143693v1	26415554	DSM 20350
Xanthomonas gardneri ATCC 19865	925777	PRJNA60023	60023	Proteobacteria	Gammaproteobacteria	5.52812	63.7	-	AEQX01	552	5131	4364	3/9/11	4/27/17	Contig	University of Florida	SAMN02471772	GCA_000192065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/065/GCA_000192065.2_ASM19206v1	21396108	ATCC 19865
Barnesiella viscericola DSM 18177	880074	PRJNA51771	51771	FCB group	Bacteroidetes/Chlorobi group	3.07686	51.7	chromosome:NZ_CP007034.1/CP007034.1	-	1	2588	2465	1/3/14	4/17/17	Complete Genome	JGI	SAMN02769649	GCA_000512915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/915/GCA_000512915.1_ASM51291v1	-	"C46, DSM 18177"
Avibacterium paragallinarum 221	1278971	PRJNA185330	185330	Proteobacteria	Gammaproteobacteria	2.66838	41	-	AOGF01	135	2786	2423	3/22/13	4/8/17	Contig	The Institute of Animal Husbandry and Veterinary Medicine of Beijing Academy of Agriculture and Forestry Sciences	SAMN02471146	GCA_000348525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/525/GCA_000348525.1_Avibacterium_paragallinarum_221	23704189	221
Vibrio sinaloensis	379097	PRJNA269560	269560	Proteobacteria	Gammaproteobacteria	4.53792	46.2	-	JWLV01	50	4171	4054	12/29/14	4/10/17	Contig	University of Malaya	SAMN03254457	GCA_000808535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/535/GCA_000808535.1_ASM80853v1	-	AD048
Microbacterium testaceum	2033	PRJNA278180	278180	Terrabacteria group	Actinobacteria	3.90292	70	-	LDRU01	177	3625	3474	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401344	GCA_001476285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/285/GCA_001476285.1_ASM147628v1	26793183	NS283
Lactobacillus fermentum F-6	767453	PRJNA49143	49143	Terrabacteria group	Firmicutes	2.06462	51.7	chromosome:NC_021235.1/CP005958.1	-	1	2074	1874	5/16/13	4/6/17	Complete Genome	"The Key Laboratory of Dairy Biotechnology and Bioengineering, Education Ministry of P. R. China, Department of Food Science and Engineering, Inner Mongolia Agricultural University, China"	SAMN02603935	GCA_000397165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/165/GCA_000397165.1_ASM39716v1	-	F-6
Neisseria meningitidis G2136	935599	PRJNA61085	61085	Proteobacteria	Betaproteobacteria	2.18486	51.7	chromosome:NC_017513.1/CP002419.1	-	1	2510	2150	3/4/11	3/21/17	Complete Genome	University of Maryland School of Medicine	SAMN02604201	GCA_000191425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/425/GCA_000191425.1_ASM19142v1	21368196	G2136
Vibrio rotiferianus	190895	PRJNA344531	344531	Proteobacteria	Gammaproteobacteria	5.30529	44.7	-	MKFT01	47	4935	4762	11/1/16	4/13/17	Scaffold	Fisheries Research Institute of Fujian Province	SAMN05828178	GCA_001858245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/245/GCA_001858245.1_ASM185824v1	-	HM-10
Terriglobus roseus	392734	PRJEB16469	349387	Acidobacteria	Acidobacteriia	4.80917	59.9	-	FNSD01	2	3995	3901	10/22/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443244	GCA_900105625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/625/GCA_900105625.1_IMG-taxon_2690315679_annotated_assembly	-	AB35.6
Neisseria meningitidis alpha710	630588	PRJNA36319	36319	Proteobacteria	Betaproteobacteria	2.24295	51.7	chromosome:NC_017505.1/CP001561.1	-	1	2570	2210	10/13/10	3/21/17	Complete Genome	"Institute for Hygiene and Microbiology, Wuerzburg University, Germany"	SAMN02603384	GCA_000152165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/165/GCA_000152165.1_ASM15216v1	20709895	alpha710
Neisseria meningitidis 053442	374833	PRJNA16393	16393	Proteobacteria	Betaproteobacteria	2.15342	51.7	chromosome:NC_010120.1/CP000381.1	-	1	2487	2114	12/3/07	3/21/17	Complete Genome	Microbial Genome Center of ChMPH	SAMN02603605	GCA_000014105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/105/GCA_000014105.1_ASM1410v1	18031983	53442
Methyloversatilis universalis Fam500	983952	PRJNA81137	81137	Proteobacteria	Betaproteobacteria	4.22016	67	-	ARWH01	1	3885	3790	4/26/13	6/20/17	Contig	JGI	SAMN02261295	GCA_000478565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/565/GCA_000478565.1_ASM47856v1	-	Fam500
Salmonella enterica	28901	PRJNA354244	354244	Proteobacteria	Gammaproteobacteria	5.08879	51.6916	chromosome:NZ_CP022494.1/CP022494.1; plasmid unnamed1:NZ_CP022495.1/CP022495.1; plasmid unnamed2:NZ_CP022496.1/CP022496.1	-	3	5190	4864	7/27/17	8/1/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN06045055	GCA_002234755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/234/755/GCA_002234755.1_ASM223475v1	-	SA20035215
Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988	1121101	PRJDB579	243831	FCB group	Bacteroidetes/Chlorobi group	5.26055	41.9	-	BAJL01	80	4169	3383	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00011624	GCA_000613685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/685/GCA_000613685.1_ASM61368v1	-	JCM 12988
Eggerthia catenaformis	31973	PRJNA382630	382630	Terrabacteria group	Firmicutes	2.35892	36.1	-	NCVR01	621	2240	2098	5/18/17	5/24/17	Contig	University College London	SAMN06711194	GCA_002148845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/845/GCA_002148845.1_ASM214884v1	-	1-Mar
Parabacteroides goldsteinii dnLKV18	1235789	PRJNA175978	175978	FCB group	Bacteroidetes/Chlorobi group	7.08675	43.5	-	ASSQ01	14	5665	5414	5/31/13	6/12/17	Scaffold	Broad Institute	SAMN01730987	GCA_000403825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/825/GCA_000403825.2_Para_gold_dnLKV18_V1	-	dnLKV18
Leptospira weilii str. 2006001855	996804	PRJNA63713	63713	Spirochaetes	Spirochaetia	4.27794	40.8	-	AFJM02	76	4246	3646	6/7/11	5/19/17	Contig	J. Craig Venter Institute	SAMN00255257	GCA_000217475.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/475/GCA_000217475.3_gls454038v02	-	2006001855
Leptospira noguchii str. 1993005606	1049973	PRJNA74041	74041	Spirochaetes	Spirochaetia	4.97064	35.8	-	AHMF02	141	4689	4032	1/24/12	4/11/17	Contig	J. Craig Venter Institute	SAMN02436432	GCA_000243535.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/535/GCA_000243535.3_gls454021v02	-	1993005606
Citrobacter freundii	546	PRJNA246471	246471	Proteobacteria	Gammaproteobacteria	5.39065	51.6671	chromosome:NZ_CP011657.1/CP011657.1; plasmid pCAV1741-101:NZ_CP011654.1/CP011654.1; plasmid pCAV1741-110:NZ_CP011655.1/CP011655.1; plasmid pCAV1741-16:NZ_CP011653.1/CP011653.1; plasmid pCAV1741-1916:NZ_CP011651.1/CP011651.1; plasmid pCAV1741-3223:NZ_CP011652.1/CP011652.1; plasmid pKPC_CAV1741:NZ_CP011656.1/CP011656.1	-	7	5431	5095	6/9/15	4/3/17	Complete Genome	University of Oxford	SAMN03733754	GCA_001022275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/275/GCA_001022275.1_ASM102227v1	-	CAV1741
Leptospira licerasiae str. MMD4847	1049971	PRJNA74163	74163	Spirochaetes	Spirochaetia	4.20134	41.1	-	AHOM02	10	3922	3860	1/24/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436419	GCA_000244715.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/715/GCA_000244715.3_gls454178v1.0	-	MMD4847
Photobacterium leiognathi lrivu.4.1	1248232	PRJDB701	231351	Proteobacteria	Gammaproteobacteria	5.26821	41.5	-	BANQ01	20	4354	4089	8/20/13	4/10/17	Scaffold	University of Miyazaki	SAMD00036651	GCA_000509205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/509/205/GCA_000509205.1_ASM50920v1	-	lrivu.4.1
Gallibacterium anatis 12656/12	1195244	PRJNA213810	213810	Proteobacteria	Gammaproteobacteria	2.56621	39.5	-	AVOX01	87	2427	2277	9/6/13	4/4/17	Contig	University of Copenhagen	SAMN02298051	GCA_000464615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/615/GCA_000464615.2_Ga_12656_12_1.0	24115542	12656/12
Prevotella maculosa DSM 19339 = JCM 15638	1122986	PRJDB593	243168	FCB group	Bacteroidetes/Chlorobi group	3.29642	47.4	-	BAJZ01	133	2732	2087	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00006259	GCA_000613965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/965/GCA_000613965.1_ASM61396v1	-	JCM 15638
Paenibacillus elgii B69	1007103	PRJEB21373	391622	Terrabacteria group	Firmicutes	8.04139	53.1	-	FYEP01	107	7366	6992	6/25/17	7/5/17	Contig	UNIVERSITI KEBANGSAAN MALAYSIA	SAMEA104136515	GCA_900188505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/505/GCA_900188505.1_SUK123	-	-
Salmonella enterica subsp. enterica serovar Indiana	286783	PRJNA393900	393900	Proteobacteria	Gammaproteobacteria	5.11939	51.6458	chromosome:NZ_CP022450.1/CP022450.1; plasmid pD90-1:NZ_CP022451.1/CP022451.1; plasmid pD90-2:NZ_CP022452.1/CP022452.1; plasmid pD90-3:NZ_CP022453.1/CP022453.1; plasmid pD90-4:NZ_CP022454.1/CP022454.1	-	5	5282	4917	7/24/17	7/28/17	Complete Genome	China National Center For Food Safety and Risk Assessment	SAMN07344413	GCA_002224405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/405/GCA_002224405.1_ASM222440v1	-	D90
Haemophilus haemolyticus M21639	1028806	PRJNA66579	66579	Proteobacteria	Gammaproteobacteria	2.32816	38.6	-	AFQR01	53	2485	2218	7/29/11	3/30/17	Contig	"Meningitis and Vaccine Preventable Diseases Branch, Centers for Disease Control and Prevention"	SAMN02952887	GCA_000222085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/085/GCA_000222085.2_ASM22208v2	21952546	M21639
Melissococcus plutonius ATCC 35311	940190	PRJDA61383	61383	Terrabacteria group	Firmicutes	2.06873	31.211	chromosome:NC_015516.1/AP012200.1; plasmid pMP1:NC_015517.1/AP012201.1	-	2	1833	1585	5/10/11	3/30/17	Chromosome	National Center for Global Health and Medicine	SAMD00060979	GCA_000270185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/185/GCA_000270185.1_ASM27018v1	21622755	ATCC 35311
Lactobacillus kefiranofaciens subsp. kefiranofaciens DSM 5016 = JCM 6985	1423827	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.25722	37.2	-	AZGG01	133	2224	1961	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369453	GCA_001435275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/275/GCA_001435275.1_ASM143527v1	26415554	DSM 5016
[Propionibacterium] humerusii HL037PA2	765123	PRJNA49281	49281	Terrabacteria group	Actinobacteria	2.61413	59.9	-	ADYH01	43	2646	2466	8/4/10	4/6/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189212	GCA_000145075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/075/GCA_000145075.1_ASM14507v1	-	HL037PA2
Streptococcus pasteurianus	197614	PRJEB7685	271670	Terrabacteria group	Firmicutes	2.12862	37.2	-	CDEY01	62	2177	1973	1/5/15	4/10/17	Contig	INSTITUT PASTEUR	SAMEA3111506	GCA_000826225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/225/GCA_000826225.1_HC-2909-2	-	HC-2909-2
Mycobacterium colombiense CECT 3035	1041522	PRJNA67689	67689	Terrabacteria group	Actinobacteria	5.57956	68.1	-	AFVW02	17	5290	5163	7/29/11	5/19/17	Contig	Universidad Nacional de Colombia	SAMN00622208	GCA_000222105.4	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/105/GCA_000222105.4_ASM22210v4	21952541	CECT 3035
Brevibacillus laterosporus GI-9	1118154	PRJEA77883	77883	Terrabacteria group	Firmicutes	5.1847	40.8	-	CAGD01	61	4625	4372	12/5/11	5/18/17	Contig	"Institute of Microbial Technology (CSIR), Sector 39A, Chandigarh-160036, India"	SAMEA2272710	GCA_000237005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/005/GCA_000237005.2_ASM23700v2	22328768	GI-9
Neisseria weaveri ATCC 51223	1051972	PRJNA68583	68583	Proteobacteria	Betaproteobacteria	2.12558	49	-	AFWR01	40	1987	1905	8/22/11	4/7/17	Contig	Seoul National University	SAMN02470917	GCA_000224275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/275/GCA_000224275.2_ASM22427v2	22188430	ATCC 51223
Mycobacterium africanum K85	611304	PRJNA34555	34555	Terrabacteria group	Actinobacteria	4.43295	65.3	-	ACHQ01	1	4368	4017	3/31/09	5/19/17	Scaffold	Broad Institute	SAMN02595307	GCA_000159775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/775/GCA_000159775.1_ASM15977v1	-	K85
Pantoea agglomerans Tx10	1332072	PRJNA202241	202241	Proteobacteria	Gammaproteobacteria	4.85699	55.1	-	ASJI01	22	4561	4391	9/30/13	4/2/17	Scaffold	University of Regina	SAMN02471931	GCA_000475055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/055/GCA_000475055.1_ASM47505v1	24179115	Tx10
Paenibacillus riograndensis	483937	PRJNA293543	293543	Terrabacteria group	Firmicutes	7.3815	50.8	-	LIRB01	149	6415	6178	2/2/16	4/11/17	Contig	UFRGS	SAMN04005682	GCA_001546065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/065/GCA_001546065.1_ASM154606v1	-	CAS34
Mycobacterium canettii CIPT 140060008	1205676	PRJEB94	184390	Terrabacteria group	Actinobacteria	4.43243	65.6	chromosome:NC_019950.1/FO203507.1	-	1	4270	4038	12/19/12	5/19/17	Chromosome	Genoscope CEA	SAMEA2272709	GCA_000328805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/805/GCA_000328805.1_ASM32880v1	23291586	CIPT 140060008
Vibrio nigripulchritudo Wn13	1238451	PRJEB564	222442	Proteobacteria	Gammaproteobacteria	6.44447	45.8	-	CAOG01	2	5769	5672	10/1/13	4/10/17	Scaffold	Genoscope CEA	SAMEA3139038	GCA_000723605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/605/GCA_000723605.1_ASP_PRJEB564_v1	23739050	Wn13
Nitrosococcus halophilus Nc 4	472759	PRJNA36589	36589	Proteobacteria	Gammaproteobacteria	4.14526	51.6222	chromosome:NC_013960.1/CP001798.1; plasmid pNHAL01:NC_013958.1/CP001799.1	-	2	3975	3766	3/26/10	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598510	GCA_000024725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/725/GCA_000024725.1_ASM2472v1	-	Nc 4
Gordonia alkanivorans NBRC 16433	1027371	PRJNA66367	66367	Terrabacteria group	Actinobacteria	5.07155	67.4	-	BACI01	132	4622	4375	8/12/11	5/18/17	Contig	National Institute of Technology and Evaluation	SAMD00041830	GCA_000225505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/505/GCA_000225505.1_ASM22550v1	-	NBRC 16433
Acetobacter tropicalis	104102	PRJNA252098	252098	Proteobacteria	Alphaproteobacteria	3.74669	55.5	-	JOKM01	124	3384	3201	9/18/14	4/9/17	Contig	Cornell University	SAMN02849419	GCA_000755665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/665/GCA_000755665.1_ASM75566v1	-	DmCS_006
Xanthomonas alfalfae subsp. alfalfae	359387	PRJNA254238	254238	Proteobacteria	Gammaproteobacteria	4.99858	64.8	-	JPYG01	945	4580	3926	10/21/15	4/11/17	Contig	Institute for Agricultural and Fisheries Research (ILVO)	SAMN02903171	GCA_001401625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/625/GCA_001401625.1_Xaa_LMG495	-	LMG 495
Xanthomonas sacchari	56458	PRJNA270308	270308	Proteobacteria	Gammaproteobacteria	4.92737	68.9	-	JXQE01	75	4286	3953	2/3/15	4/10/17	Scaffold	CIRAD	SAMN03265443	GCA_000831625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/625/GCA_000831625.1_Xsac-LMG_476-G1	-	LMG 476
Citrobacter freundii	546	PRJNA392034	392034	Proteobacteria	Gammaproteobacteria	5.61013	51.6189	chromosome:NZ_CP022273.1/CP022273.1; plasmid pA18-1:NZ_CP022274.1/CP022274.1; plasmid pBKPC18-1:NZ_CP022275.1/CP022275.1; plasmid pCKPC18-1:NZ_CP022276.1/CP022276.1; plasmid pD18-1:NZ_CP022277.1/CP022277.1	-	5	5790	5215	7/6/17	7/8/17	Complete Genome	State Key Laboratory for Diagnosis and Treatment of Infectious Disease	SAMN07280739	GCA_002215385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/385/GCA_002215385.1_ASM221538v1	-	18-1
Neisseria meningitidis	487	PRJNA291329	291329	Proteobacteria	Betaproteobacteria	2.17062	51.6	chromosome:NZ_CP012392.1/CP012392.1	-	1	2488	2141	8/2/16	3/21/17	Complete Genome	JLU	SAMN03944748	GCA_001697125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/125/GCA_001697125.1_ASM169712v1	-	DE10444
Bacillus methanolicus PB1	997296	PRJNA63653	63653	Terrabacteria group	Firmicutes	3.42651	39.0853	plasmid pBM20:NZ_AFEU01000007.1/AFEU01000007.1	AFEU01	7	3357	3141	5/14/12	4/7/17	Contig	SINTEF Materials and Chemistry	SAMN00261231	GCA_000262755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/755/GCA_000262755.1_ASM26275v1	22610424	PB1
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.17369	51.6	chromosome:NZ_CP016646.1/CP016646.1	-	1	2491	2104	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883393	GCA_001697345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/345/GCA_001697345.1_ASM169734v1	-	M22819
Selenomonas ruminantium	971	PRJEB15897	347948	Terrabacteria group	Firmicutes	2.74828	50	-	FNCM01	34	2627	2502	10/20/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216584	GCA_900100835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/835/GCA_900100835.1_IMG-taxon_2654588117_annotated_assembly	-	WCT3
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.18217	51.6	chromosome:NZ_CP016647.1/CP016647.1	-	1	2518	2121	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883391	GCA_001697365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/365/GCA_001697365.1_ASM169736v1	-	M22809
Ornithobacterium rhinotracheale H06-030791	1401326	PRJNA219465	219465	FCB group	Bacteroidetes/Chlorobi group	2.31903	37.2	-	AXDE01	8	2208	2111	9/22/14	4/10/17	Contig	National Animal Disease Center	SAMN02358230	GCA_000764515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/515/GCA_000764515.1_ASM76451v1	-	H06-030791
Lactobacillus pentosus DSM 20314	1423791	PRJNA222257	222257	Terrabacteria group	Firmicutes	3.64771	46.3	-	AZCU01	60	3416	3122	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369484	GCA_001433755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/755/GCA_001433755.1_ASM143375v1	26415554	DSM 20314
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.1857	51.6	chromosome:NZ_CP016654.1/CP016654.1	-	1	2522	2123	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883392	GCA_001697505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/505/GCA_001697505.1_ASM169750v1	-	M22811
Lactobacillus acidipiscis	89059	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.31809	39.1	-	JQBK01	297	2199	2040	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02797774	GCA_001436945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/945/GCA_001436945.1_ASM143694v1	26415554	DSM 15353
Staphylococcus sciuri subsp. sciuri	147467	PRJNA283171	283171	Terrabacteria group	Firmicutes	2.78959	32.5	-	LEOS01	66	2738	2666	7/6/15	4/3/17	Contig	Interv Neuroradiol	SAMN03609693	GCA_001046995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/995/GCA_001046995.1_ASM104699v1	-	DSM 20345
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.17479	51.6	chromosome:NZ_CP016660.1/CP016660.1	-	1	2501	2118	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883390	GCA_001697625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/625/GCA_001697625.1_ASM169762v1	-	M22804
Proteus vulgaris	585	PRJEB9438	285658	Proteobacteria	Gammaproteobacteria	3.87244	38.1	-	CVRY01	13	3641	3462	6/5/15	4/10/17	Contig	URMITE	SAMEA3444917	GCA_001049955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/955/GCA_001049955.1_PRJEB9438_assembly_1	-	CSUR P1867
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.18057	51.6	chromosome:NZ_CP016671.1/CP016671.1	-	1	2517	2116	8/2/16	3/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04883386	GCA_001697845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/845/GCA_001697845.1_ASM169784v1	-	M22783
Taylorella asinigenitalis 14/45	1091495	PRJNA73733	73733	Proteobacteria	Betaproteobacteria	1.54027	38.4	-	-	1	1457	1415	-	-	Scaffold	University of Bristol	SAMEA4532338	GCA_000367225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/225/GCA_000367225.1_ASM36722v1	-	14/45
Acidithiobacillus thiooxidans	930	PRJNA245008	245008	Proteobacteria	Acidithiobacillia	3.9379	52.8	-	JMEB01	345	4359	3774	6/17/14	4/2/17	Contig	CRG-Mathomics	SAMN02730187	GCA_000709715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/715/GCA_000709715.1_ATLIC3.0	25148779	Licanantay
Neisseria meningitidis	487	PRJNA260393	260393	Proteobacteria	Betaproteobacteria	2.19667	51.6	chromosome:NZ_CP009420.1/CP009420.1	-	1	2539	2184	12/9/14	3/21/17	Complete Genome	University of Pittsburgh	SAMN03020600	GCA_000800315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/315/GCA_000800315.1_ASM80031v1	-	NM3682
Streptococcus sobrinus TCI-9	1074052	PRJNA71871	71871	Terrabacteria group	Firmicutes	2.10494	43.5	-	AGGB01	455	2157	1840	10/6/11	3/30/17	Contig	JCVI	SAMN02436626	GCA_000227785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/785/GCA_000227785.2_SMUT1-NEX_1-9	-	TCI-9
Cutibacterium avidum ATCC 25577	997355	PRJNA64741	64741	Terrabacteria group	Actinobacteria	2.55396	63.3	-	AGBA01	7	2342	2209	10/3/11	3/30/17	Scaffold	Baylor College of Medicine	SAMN02299449	GCA_000227295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/295/GCA_000227295.1_ASM22729v1	-	ATCC 25577
Komagataeibacter europaeus LMG 18494	940284	PRJEA61325	61325	Proteobacteria	Alphaproteobacteria	3.99128	61.2	-	CADR01	216	3870	3412	2/21/11	4/7/17	Scaffold	Vital-IT - Swiss Institute of Bioinformatics	SAMEA2272340	GCA_000227545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/545/GCA_000227545.1_ASM22754v1	-	LMG 18494
Candidatus Glomeribacter gigasporarum	132144	PRJNA276133	276133	Proteobacteria	Betaproteobacteria	1.62137	50.5	-	LXRH01	1172	-	-	7/12/16	7/12/16	Scaffold	Cornell University	SAMN03366746	GCA_001684155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/684/155/GCA_001684155.1_ASM168415v1	-	JA201A
Neisseria meningitidis	487	PRJNA260444	260444	Proteobacteria	Betaproteobacteria	2.19922	51.6	chromosome:NZ_CP009421.1/CP009421.1	-	1	2533	2197	12/9/14	3/21/17	Complete Genome	University of Pittsburgh	SAMN03022885	GCA_000800355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/355/GCA_000800355.1_ASM80035v1	-	NM3683
Dickeya chrysanthemi NCPPB 3533	1224148	PRJNA172952	172952	Proteobacteria	Gammaproteobacteria	4.73071	54.5052	chromosome:NZ_CM001981.1/CM001981.1	AOOJ01	23	4331	4100	6/4/13	4/8/17	Chromosome	James Hutton Institute	SAMN02470090	GCA_000406245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/245/GCA_000406245.1_DCH3533_1.0	24265502	NCPPB 3533
Pyrococcus yayanosii CH1	529709	PRJNA66055	66055	Euryarchaeota	Thermococci	1.71682	51.6	chromosome:NC_015680.1/CP002779.1	-	1	1906	1786	6/7/11	4/17/17	Complete Genome	Shanghai JiaoTong University	SAMN02603867	GCA_000215995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/995/GCA_000215995.1_ASM21599v1	21705594	CH1
Candidatus Caldiarchaeum subterraneum	311458	PRJDA49157	49157	TACK group	Thaumarchaeota	1.68094	51.6	chromosome:BA000048.1	-	1	1790	1730	12/25/10	10/7/16	Complete Genome	Japan Agency for Maine-Earth Science and Technology	SAMD00016619	GCA_000270325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/325/GCA_000270325.1_ASM27032v1	-	-
Actinomyces naeslundii	1655	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.06822	68	-	MSRM01	104	2615	2465	1/18/17	4/6/17	Contig	King's College London	SAMN05898706	GCA_001956475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/475/GCA_001956475.1_ASM195647v1	-	T23P-1
Clostridium pasteurianum	1501	PRJNA335535	335535	Terrabacteria group	Firmicutes	4.67718	30.3	-	MCGV01	2	4231	4067	8/15/16	4/5/17	Contig	Nanjing University of Technology	SAMN05447592	GCA_001705235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/235/GCA_001705235.1_ASM170523v1	-	GL11
Thermodesulfobacterium commune	1741	PRJNA278302	278302	Thermodesulfobacteria	Thermodesulfobacteria	1.13488	36.9	-	LGFE01	157	1230	1230	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445130	GCA_001508095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/095/GCA_001508095.1_ASM150809v1	26787827	-
Atopobium minutum	1381	PRJEB16473	349383	Terrabacteria group	Actinobacteria	1.77956	48.7	-	FNSH01	3	1682	1566	10/22/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04489746	GCA_900105895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/895/GCA_900105895.1_IMG-taxon_2634166360_annotated_assembly	-	DSM 20586
Azospirillum brasilense Sp245	1064539	PRJEA70627	70627	Proteobacteria	Alphaproteobacteria	7.53024	68.468	chromosome:NC_016617.1/HE577327.1; plasmid AZOBR_p1:NC_016594.1/HE577328.1; plasmid AZOBR_p2:NC_016618.1/HE577329.1; plasmid AZOBR_p3:NC_016595.1/HE577330.1; plasmid AZOBR_p4:NC_016596.1/HE577331.1; plasmid AZOBR_p5:NC_016619.1/HE577332.1; plasmid AZOBR_p6:NC_016597.1/HE577333.1	-	7	6982	6507	11/11/11	6/19/17	Chromosome	Georgia Institute of Technology	SAMEA2272384	GCA_000237365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/365/GCA_000237365.1_ASM23736v1	22216014	Sp245
Rhizobium tropici	398	PRJNA247580	247580	Proteobacteria	Alphaproteobacteria	7.38388	59.9	-	JUHQ01	49	7005	6702	12/9/14	4/10/17	Scaffold	DOE Joint Genome Institute	SAMN02787128	GCA_000799925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/925/GCA_000799925.1_ASM79992v1	-	YR635
Mycobacterium chelonae	1774	PRJNA347845	347845	Terrabacteria group	Actinobacteria	5.09202	64.1	-	MLHZ01	17	4973	4850	10/26/16	4/5/17	Contig	University of Georgia	SAMN05897981	GCA_001853535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/535/GCA_001853535.1_ASM185353v1	-	24998
Neisseria meningitidis FAM18	272831	PRJNA255	255	Proteobacteria	Betaproteobacteria	2.19496	51.6	chromosome:NC_008767.1/AM421808.1	-	1	2537	2202	1/4/07	3/21/17	Complete Genome	Sanger Institute	SAMEA1705939	GCA_000009465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/465/GCA_000009465.1_ASM946v1	17305430	FAM18
Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K	1243602	PRJNA177609	177609	Proteobacteria	Gammaproteobacteria	5.05144	51.5675	chromosome:NZ_CP022139.1/CP022139.1; plasmid unnamed1:NZ_CP022140.1/CP022140.1; plasmid unnamed2:NZ_CP022141.1/CP022141.1	-	3	5043	4669	6/30/17	7/3/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN04160813	GCA_002211865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/865/GCA_002211865.1_ASM221186v1	-	1315K
Citrobacter freundii	546	PRJNA246471	246471	Proteobacteria	Gammaproteobacteria	5.4894	51.5557	chromosome:NZ_CP011612.1/CP011612.1; plasmid pCAV1321-135:NZ_CP011610.1/CP011610.1; plasmid pCAV1321-1916:NZ_CP011603.1/CP011603.1; plasmid pCAV1321-3223:NZ_CP011604.1/CP011604.1; plasmid pCAV1321-3820:NZ_CP011605.1/CP011605.1; plasmid pCAV1321-4310:NZ_CP011606.1/CP011606.1; plasmid pCAV1321-4938:NZ_CP011607.1/CP011607.1; plasmid pCAV1321-71:NZ_CP011609.1/CP011609.1; plasmid pKPC_CAV1321-244:NZ_CP011611.1/CP011611.1; plasmid pKPC_CAV1321-45:NZ_CP011608.1/CP011608.1	-	10	5563	5226	6/9/15	4/3/17	Complete Genome	University of Oxford	SAMN03733741	GCA_001022155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/155/GCA_001022155.1_ASM102215v1	-	CAV1321
Prochloron didemni P4-Papua_New_Guinea	1094894	PRJNA82337	82337	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.68656	41.9	-	AGGA01	690	-	-	12/29/11	8/12/14	Scaffold	Institute for Genome Sciences	SAMN02954252	GCA_000252485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/485/GCA_000252485.1_ASM25248v1	22123943	-
Pseudomonas tolaasii 6264	1161101	PRJNA89427	89427	Proteobacteria	Gammaproteobacteria	6.23381	61	-	AKYY01	688	5959	5265	12/3/12	5/19/17	Contig	Chungbuk National University	SAMN02469594	GCA_000316215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/215/GCA_000316215.1_Pseudomonas_tollassii	-	6264
Salmonella enterica subsp. enterica serovar India str. SA20085604	1242098	PRJNA177230	177230	Proteobacteria	Gammaproteobacteria	5.86874	51.5064	chromosome:CP022015.1; plasmid unnamed1:CP022016.1	-	2	6116	5695	6/26/17	6/26/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN04160811	GCA_002208195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/195/GCA_002208195.1_ASM220819v1	-	SA20085604
Aerococcus christensenii DSM 15819 = CCUG 28831	525247	PRJNA175732	175732	Terrabacteria group	Firmicutes	1.58938	39	-	AMZK01	46	1520	1421	12/15/15	4/11/17	Contig	Zhejiang University	SAMN03018620	GCA_001466745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/745/GCA_001466745.1_DSM15819v1.0	-	DSM 15819
Anaerostipes hadrus	649756	PRJNA275049	275049	Terrabacteria group	Firmicutes	3.54256	36.6	-	JYFK01	117	3525	3337	2/17/15	4/3/17	Contig	Helsinki University	SAMN03338996	GCA_000876135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/135/GCA_000876135.1_ASM87613v1	25838483	PEL 85
Clostridium orbiscindens 1_3_50AFAA	742738	PRJNA46395	46395	Terrabacteria group	Firmicutes	4.38364	60.3	-	ADLO01	61	4280	3865	9/26/14	4/2/17	Scaffold	Broad Institute	SAMN00103468	GCA_000760655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/655/GCA_000760655.1_Clos_orbi_1_3_50AFAA_V1	-	1_3_50AFAA
Haloferax mediterranei ATCC 33500	523841	PRJNA174886	174886	Euryarchaeota	Halobacteria	3.89454	60.3	-	AOLO01	16	3882	3758	2/4/13	4/8/17	Contig	"University of California, Davis"	SAMN02471643	GCA_000337295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/295/GCA_000337295.1_ASM33729v1	25393412	ATCC 33500
Alistipes finegoldii	214856	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	3.21555	58.2	-	CZBZ01	8	2703	2584	10/1/15	4/11/17	Contig	SC	SAMEA3545410	GCA_001405855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/855/GCA_001405855.1_14207_7_70	-	2789STDY5834947
Bacillus simplex BA2H3	1403313	PRJNA219716	219716	Terrabacteria group	Firmicutes	5.54255	40.3	-	AXBR01	11	5368	4989	11/18/14	4/10/17	Scaffold	CNRS - UPR2355	SAMN03196956	GCA_000785385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/385/GCA_000785385.1_BacSimBA2H3_1.0	25635020	BA2H3
Pseudomonas agarici	46677	PRJEB16836	350973	Proteobacteria	Gammaproteobacteria	5.5081	59	-	FOAR01	77	4998	4738	10/29/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216604	GCA_900109755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/755/GCA_900109755.1_IMG-taxon_2667527210_annotated_assembly	-	LMG 2112
Paenibacillus alvei TS-15	1117108	PRJNA77739	77739	Terrabacteria group	Firmicutes	6.70978	46.6	-	ATMT01	108	5884	5600	7/31/13	4/8/17	Contig	FDA	SAMN01816161	GCA_000442555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/555/GCA_000442555.1_CFSAN001086_1.0	23990585	TS-15
Actinobacillus suis H91-0380	696748	PRJNA42159	42159	Proteobacteria	Gammaproteobacteria	2.48494	40.2	chromosome:NC_018690.1/CP003875.1	-	1	2334	2219	10/1/12	5/18/17	Chromosome	University of Guelph	SAMN02604182	GCA_000307145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/145/GCA_000307145.1_ASM30714v1	23144422	H91-0380
Salmonella enterica subsp. enterica	59201	PRJNA177613	177613	Proteobacteria	Gammaproteobacteria	4.58633	51.5	chromosome:CP022504.1	-	1	4657	4104	7/27/17	7/27/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN04160807	GCA_002234855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/234/855/GCA_002234855.1_ASM223485v1	-	SA20100345
Vibrio navarrensis	29495	PRJNA242769	242769	Proteobacteria	Gammaproteobacteria	4.16531	48.5	-	JMCF01	119	3897	3688	10/7/14	4/9/17	Contig	CDC	SAMN02708869	GCA_000764345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/345/GCA_000764345.1_0053-83v1.0	25414502	0053-83
Pseudomonas viridiflava CC1582	1357290	PRJNA211420	211420	Proteobacteria	Gammaproteobacteria	6.0196	59.2	-	AVDW01	211	5430	5266	8/20/13	4/2/17	Scaffold	University of Arizona	SAMN02471565	GCA_000452505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/505/GCA_000452505.1_CC1582_042011_1.0	24459267	CC1582
Salmonella enterica subsp. diarizonae serovar 50:k:z str. MZ0080	1243612	PRJNA177617	177617	Proteobacteria	Gammaproteobacteria	5.07695	51.5	chromosome:NZ_CP022142.1/CP022142.1	-	1	5035	4633	6/30/17	7/3/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN04160830	GCA_002211965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/965/GCA_002211965.1_ASM221196v1	-	MZ0080
Actinotignum schaalii DSM 15541	1120932	PRJNA185527	185527	Terrabacteria group	Actinobacteria	2.13099	62.3	-	AUBK01	27	1802	1695	7/15/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441197	GCA_000429205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/205/GCA_000429205.1_ASM42920v1	-	DSM 15541
Turicella otitidis	29321	PRJNA282675	282675	Terrabacteria group	Actinobacteria	2.14443	71.3	-	LBNF01	148	1934	1748	5/5/15	4/10/17	Contig	CDPH	SAMN03573806	GCA_000988215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/215/GCA_000988215.1_ASM98821v1	26383669	TD1
Leclercia adecarboxylata	83655	PRJNA270287	270287	Proteobacteria	Gammaproteobacteria	4.98157	56.6	-	JWJV01	61	4767	4584	1/2/15	4/10/17	Contig	University of Malaya	SAMN03265390	GCA_000813585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/585/GCA_000813585.1_ASM81358v1	-	KY2
Leptotrichia wadei	157687	PRJNA272072	272072	Fusobacteria	Fusobacteriia	2.37759	29.5	-	LSDD01	126	2244	2066	2/8/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN03854666	GCA_001553045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/045/GCA_001553045.1_ASM155304v1	-	KA00185
Mycobacterium chubuense	1800	PRJNA276400	276400	Terrabacteria group	Actinobacteria	5.94501	69.2	-	JYNX01	96	5717	5432	7/1/15	4/10/17	Scaffold	Uppsala University	SAMN03375743	GCA_001044255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/255/GCA_001044255.1_ASM104425v1	26079817	DSM 44219
Mycobacterium rhodesiae	36814	PRJNA354248	354248	Terrabacteria group	Actinobacteria	6.009	66.6	-	MVIH01	52	5769	5635	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064257	GCA_002086695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/695/GCA_002086695.1_ASM208669v1	-	DSM 44223
Emticicia oligotrophica	312279	PRJEB19501	380479	FCB group	Bacteroidetes/Chlorobi group	2.41566	35.9	-	FXVF01	78	-	-	5/12/17	5/12/17	Scaffold	UNIVERSITY OF DELHI	SAMEA103916781	GCA_900177575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/575/GCA_900177575.1_Emticicia_sp._MM	-	-
Natronobacterium gregoryi SP2	797304	PRJNA174939	174939	Euryarchaeota	Halobacteria	3.69403	62.3	-	AOIC01	128	3735	3469	2/4/13	4/8/17	Contig	"University of California, Davis"	SAMN02471625	GCA_000337655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/337/655/GCA_000337655.1_ASM33765v1	25393412	SP2
Sulfobacillus thermosulfidooxidans ST	1366420	PRJNA203261	203261	Terrabacteria group	Firmicutes	3.33355	48.3	-	AWEW01	53	3244	3122	11/20/13	4/9/17	Scaffold	Central South University	SAMN02251434	GCA_000497695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/695/GCA_000497695.1_SulTherST	-	ST
Acinetobacter ursingii NIPH 706	1217716	PRJNA183281	183281	Proteobacteria	Gammaproteobacteria	3.51004	40	-	APQB01	20	3381	3193	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN01087838	GCA_000369885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/885/GCA_000369885.1_Acin_ursi_NIPH_706_V1	-	NIPH 706
Clostridium saccharoperbutylacetonicum N1-4(HMT)	931276	PRJNA186901	186901	Terrabacteria group	Firmicutes	6.56963	29.4	-	AOIF01	210	5843	5554	1/30/13	5/18/17	Contig	CIB-CSIC	SAMN02469458	GCA_000334435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/435/GCA_000334435.1_CloSac1.0	-	ATCC 27021
Myroides odoratus	256	PRJNA309621	309621	FCB group	Bacteroidetes/Chlorobi group	4.09819	35.8	-	LROZ01	82	3665	3491	2/5/16	4/11/17	Contig	Huashan Hospital affiliated to Fudan University	SAMN04437153	GCA_001549985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/985/GCA_001549985.1_ASM154998v1	-	XSfan
Streptomyces cattleya	29303	PRJNA267549	267549	Terrabacteria group	Actinobacteria	1.91625	55.9	-	JWDF01	27	-	-	7/10/15	7/13/16	Contig	University of Washington	SAMN03197055	GCA_001070095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/095/GCA_001070095.1_ASM107009v1	26230489	1093_SCAT
Raoultella planticola	575	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.82373	55.6	-	JTBS01	3	5641	5202	11/14/14	7/6/17	Contig	US Food and Drug Administration 	SAMN02934513	GCA_000783935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/935/GCA_000783935.1_ASM78393v1	-	FDAARGOS_64
Neorhizobium galegae bv. officinalis	323656	PRJEB6976	282473	Proteobacteria	Alphaproteobacteria	6.40922	61.6	-	CCRI01	54	6159	5942	4/29/15	4/3/17	Contig	UH	SAMEA2698475	GCA_000985875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/875/GCA_000985875.1_NgalHAMBI1146Draft	-	-
Neisseria meningitidis	487	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	2.27368	51.5	chromosome:NZ_CP020421.1/CP020421.1	-	1	2579	2263	3/29/17	4/1/17	Complete Genome	US Food and Drug Administration 	SAMN04875547	GCA_002073595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/595/GCA_002073595.1_ASM207359v1	-	FDAARGOS_210
Campylobacter lanienae	75658	PRJNA341009	341009	Proteobacteria	delta/epsilon subdivisions	1.68723	34.1	-	MJJT01	88	1734	1642	5/15/17	9/19/17	Contig	USDA	SAMN05687029	GCA_002138605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/605/GCA_002138605.1_ASM213860v1	28854596	RM6987
Campylobacter hyointestinalis	198	PRJEB17580	351949	Proteobacteria	delta/epsilon subdivisions	1.74221	34	-	FPBB01	14	1789	1691	11/2/16	4/14/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421691	GCA_900116585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/585/GCA_900116585.1_IMG-taxon_2687453784_annotated_assembly	-	ATCC 35217
Arcobacter cryaerophilus	28198	PRJNA307600	307600	Proteobacteria	delta/epsilon subdivisions	2.17528	27.1	-	LRUU01	83	2190	2117	2/25/16	4/12/17	Scaffold	Agriculture and Agri-Food Canada	SAMN04386094	GCA_001572845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/845/GCA_001572845.1_ASM157284v1	-	L401
Neisseria meningitidis	487	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	2.24486	51.5	chromosome:NZ_CP020423.1/CP020423.1	-	1	2594	2232	3/29/17	4/1/17	Complete Genome	US Food and Drug Administration 	SAMN04875549	GCA_002073675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/675/GCA_002073675.1_ASM207367v1	-	FDAARGOS_212
Arcobacter skirrowii	28200	PRJNA307998	307998	Proteobacteria	delta/epsilon subdivisions	1.87022	27.9	-	LRUY01	83	1959	1865	2/25/16	4/12/17	Contig	Agriculture and Agri-Food Canada	SAMN04386096	GCA_001572945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/945/GCA_001572945.1_ASM157294v1	-	L404
Arcobacter thereius	544718	PRJNA283164	283164	Proteobacteria	delta/epsilon subdivisions	2.1443	27	-	LCUH01	62	2224	2112	7/26/16	4/13/17	Scaffold	Ghent University	SAMN03609674	GCA_001695255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/255/GCA_001695255.1_ASM169525v1	-	LMG24487
Pseudomonas synxantha	47883	PRJNA274345	274345	Proteobacteria	Gammaproteobacteria	6.79298	59.7	-	JYLJ01	64	6271	6034	11/6/15	4/11/17	Contig	"Zentralinstitut fuer Ernaehrungs- und Lebensmittelforschung (ZIEL), WZW, TUM"	SAMN03328797	GCA_001439725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/725/GCA_001439725.1_G8689	-	DSM 18928
Rhodococcus pyridinivorans AK37	1114960	PRJNA76789	76789	Terrabacteria group	Actinobacteria	5.24461	67.9	-	AHBW01	98	4927	4506	12/8/11	5/19/17	Contig	BAYGEN	SAMN02469321	GCA_000236965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/965/GCA_000236965.2_ASM23696v2	-	AK37
Salmonella enterica subsp. diarizonae	59204	PRJNA276399	276399	Proteobacteria	Gammaproteobacteria	4.77935	51.5	chromosome:NZ_CP011288.1/CP011288.1	-	1	4673	4317	4/22/16	3/1/17	Complete Genome	Robert Koch-Institut	SAMN03371466	GCA_001628755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/755/GCA_001628755.1_ASM162875v1	-	11-01855
Rhodococcus ruber	1830	PRJNA285434	285434	Terrabacteria group	Actinobacteria	5.727	70.5	-	LDUF01	65	5248	5088	7/9/15	4/10/17	Contig	"INSTITUTE OF ECOLOGY AND GENETICS OF MICROORGANISMS, URAL BRANCH OF THE RUSSIAN ACADEMY OF SCIENCES"	SAMN03753826	GCA_001051275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/275/GCA_001051275.1_ASM105127v1	26337885	P25
Oenococcus kitaharae	336988	PRJNA264405	264405	Terrabacteria group	Firmicutes	1.78529	42.8	-	JSAI01	16	1811	1731	10/5/16	4/13/17	Scaffold	Institut des Sciences de la Vigne et du Vin	SAMN03121844	GCA_001752505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/505/GCA_001752505.1_ASM175250v1	-	NRIC_0650
Leptospirillum ferriphilum	178606	PRJNA248540	248540	Nitrospirae	Nitrospira	2.40588	54.1	-	JPGK01	18	2458	2366	9/16/14	4/9/17	Contig	Fundacion Ciencia & Vida	SAMN02894305	GCA_000755505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/505/GCA_000755505.1_ASM75550v1	25377718	DSM 14647
Lactobacillus mali KCTC 3596 = DSM 20444	1046596	PRJDA68085	68085	Terrabacteria group	Firmicutes	2.65297	36	-	BACP01	122	2632	2503	6/21/11	4/7/17	Contig	Korea Research Institute of Bioscience and Biotechnology	SAMD00036560	GCA_000260415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/415/GCA_000260415.1_ASM26041v1	21742889	KCTC 3596
Rhodococcus fascians A73a	1443896	PRJNA233522	233522	Terrabacteria group	Actinobacteria	5.93175	64.4	-	JMEW01	23	5489	5333	9/30/14	4/2/17	Scaffold	Oregon State University	SAMN02569994	GCA_000760755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/755/GCA_000760755.1_R_fas_A73a	-	A73a
Enterococcus mundtii ATCC 882	1158598	PRJNA88833	88833	Terrabacteria group	Firmicutes	3.07886	38.5	-	AJAH01	14	2962	2727	5/3/13	4/1/17	Scaffold	Broad Institute	SAMN00809106	GCA_000393815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/815/GCA_000393815.1_Ente_mund_ATCC882_V1	-	ATCC 882
Janibacter terrae NBRC 107854 = JCM 12887	1053688	PRJDB961	243797	Terrabacteria group	Actinobacteria	1.78218	69.3	-	BBGR01	1403	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016928	GCA_001313905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/905/GCA_001313905.1_ASM131390v1	-	JCM 12887
Bacillus aquimaris	189382	PRJNA274730	274730	Terrabacteria group	Firmicutes	4.30545	42	-	JXZC01	45	4224	4160	3/2/15	4/10/17	Contig	85303	SAMN03332000	GCA_000935355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/355/GCA_000935355.1_ASM93535v1	-	JM7
Legionella anisa	28082	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	4.39886	38.2	-	LNXS01	55	3949	3758	12/15/15	4/11/17	Scaffold	Tel Aviv University	SAMN04274764	GCA_001467525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/525/GCA_001467525.1_ASM146752v1	26752266	WA-316-C3
Bacillus horikoshii DSM 8719	1076414	PRJNA72395	72395	Terrabacteria group	Firmicutes	4.67789	41.3	-	LQXN01	67	4745	4557	5/19/16	4/12/17	Contig	Cinvestav-Irapuato	SAMN04407485	GCA_001648575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/575/GCA_001648575.1_ASM164857v1	-	DSM 8719
Bacillus mojavensis RO-H-1 = KCTC 3706	1051501	PRJNA227789	227789	Terrabacteria group	Firmicutes	3.93558	43.7	-	AYTL01	38	4089	3880	12/12/13	4/9/17	Contig	KRIBB	SAMN02414602	GCA_000507105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/507/105/GCA_000507105.1_KCTC_3706_01	-	RO-H-1 = KCTC 3706
Mycobacterium thermoresistibile	1797	PRJDB4227	295926	Terrabacteria group	Actinobacteria	4.89314	69	-	BCTB01	85	4632	4468	2/10/16	4/12/17	Scaffold	"Microbiology, Graduate School of Medical Sciences, Kyushu University"	SAMD00041176	GCA_001570505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/505/GCA_001570505.1_ASM157050v1	27231354	JCM6362
Herbaspirillum rubrisubalbicans Os34	1235827	PRJNA175951	175951	Proteobacteria	Betaproteobacteria	6.15299	61.2	-	AMSB01	252	5524	5373	10/1/12	5/18/17	Contig	Zhejiang University	SAMN02469493	GCA_000300435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/435/GCA_000300435.1_ASM30043v1	23209241	Os34
Leucobacter chromiiresistens	1079994	PRJEB15841	347798	Terrabacteria group	Actinobacteria	3.215	70.3	-	FNKB01	2	2954	2846	10/20/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488565	GCA_900102345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/345/GCA_900102345.1_IMG-taxon_2639762569_annotated_assembly	-	DSM 22788
Mesorhizobium amorphae CCBAU 01583	1449348	PRJNA235165	235165	Proteobacteria	Alphaproteobacteria	7.68639	62.5	-	JHUP01	90	8747	4295	6/16/17	6/20/17	Scaffold	China Agricultural University	SAMN02584783	GCA_002200945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/945/GCA_002200945.1_ASM220094v1	-	CCBAU 01583
Carnobacterium maltaromaticum DSM 20342	1449341	PRJNA222257	222257	Terrabacteria group	Firmicutes	3.75457	34.3	-	JQBG01	111	3567	3409	11/6/15	4/4/17	Scaffold	Shanghai Majorbio	SAMN02797801	GCA_001437315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/315/GCA_001437315.1_ASM143731v1	26415554	DSM 20342
Salmonella enterica subsp. arizonae serovar 62:z36:- str. RKS2983	1386967	PRJNA215272	215272	Proteobacteria	Gammaproteobacteria	4.57485	51.5	chromosome:NZ_CP006693.1/CP006693.1	-	1	4577	4080	9/22/14	2/26/17	Complete Genome	Harbin Medical University	SAMN03072812	GCA_000756465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/465/GCA_000756465.1_ASM75646v1	-	RKS2983
Paenibacillus peoriae	59893	PRJNA343020	343020	Terrabacteria group	Firmicutes	5.9962	45.6	-	MRTC01	74	5283	5083	1/18/17	4/6/17	Contig	Cornell University	SAMN05929602	GCA_001955935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/935/GCA_001955935.1_ASM195593v1	-	FSL A5-0030
Rhodoluna lacicola	529884	PRJNA237851	237851	Terrabacteria group	Actinobacteria	1.43043	51.5	chromosome:NZ_CP007490.1/CP007490.1	-	1	1404	1351	6/9/14	9/25/17	Complete Genome	University of Innsbruck	SAMN02848463	GCA_000699505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/505/GCA_000699505.1_ASM69950v1	24984700	MWH-Ta8
Xanthomonas vasicola pv. vasculorum NCPPB 1381	1094180	PRJNA73869	73869	Proteobacteria	Gammaproteobacteria	4.9581	63.2	-	AKBL01	337	4583	3933	7/17/12	5/19/17	Scaffold	University of Exeter	SAMN00991255	GCA_000278015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/015/GCA_000278015.1_Xvv1381v1	24704974	NCPPB 1381
Leptospira kirschneri serovar Bim str. 1051	1049941	PRJNA74053	74053	Spirochaetes	Spirochaetia	4.39918	35.9	-	AHML02	36	3959	3627	1/24/12	5/18/17	Contig	J. Craig Venter Institute	SAMN02436369	GCA_000243655.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/655/GCA_000243655.3_gls454046v2.0	-	1051
Fluoribacter dumoffii NY 23	1094715	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	3.818	39.6	-	LNXZ01	12	3422	3298	12/15/15	4/11/17	Scaffold	Tel Aviv University	SAMN04274771	GCA_001467605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/605/GCA_001467605.1_ASM146760v1	26752266	NY 23
Leptospira alexanderi	100053	PRJNA257144	257144	Spirochaetes	Spirochaetia	4.04435	40.3	-	JQGU01	335	3973	3524	3/2/17	3/4/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947770	GCA_002009805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/805/GCA_002009805.1_ASM200980v1	-	56643
Salinispora pacifica CNS860	1169186	PRJNA175151	175151	Terrabacteria group	Actinobacteria	5.35747	69.6	-	ARGI01	62	5039	4695	4/19/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441020	GCA_000374705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/705/GCA_000374705.1_ASM37470v1	-	CNS860
Xanthomonas arboricola pv. celebensis	454957	PRJNA254393	254393	Proteobacteria	Gammaproteobacteria	4.90802	65.6	-	JPHC01	3	4278	4036	7/11/14	4/2/17	Scaffold	University of Exeter	SAMN02903333	GCA_000724925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/925/GCA_000724925.1_ASM72492v1	26868395	NCPPB 1832
Rickettsia parkeri str. Grand Bay	1359203	PRJNA212478	212478	Proteobacteria	Alphaproteobacteria	1.30969	32.4	-	LAOK01	1	1561	1271	3/27/15	4/10/17	Contig	IGS	SAMN02585089	GCA_000965085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/085/GCA_000965085.1_ASM96508v1	-	Grand Bay
Rickettsia rhipicephali str. Ect	1359199	PRJNA212462	212462	Proteobacteria	Alphaproteobacteria	1.26692	32.6	-	LAOC01	1	1504	1109	3/27/15	4/10/17	Contig	IGS	SAMN02585079	GCA_000964905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/905/GCA_000964905.1_ASM96490v1	-	Ect
Bartonella elizabethae F9251 = ATCC 49927	1094555	PRJNA223122	223122	Proteobacteria	Alphaproteobacteria	1.96397	38.3	-	JADB01	39	1770	1621	1/10/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02585007	GCA_000518165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/165/GCA_000518165.1_ASM51816v1	-	ATCC 49927
Bartonella doshiae	33044	PRJEB6000	242927	Proteobacteria	Alphaproteobacteria	1.91726	37.9	-	CCBL01	13	1705	1550	4/3/14	4/12/17	Contig	URMITE	SAMEA3146312	GCA_900005695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/005/695/GCA_900005695.1_PRJEB6000_assembly_1	-	BM1374167
Bartonella vinsonii subsp. arupensis Pm136co	1094561	PRJNA75207	75207	Proteobacteria	Alphaproteobacteria	1.85719	38.9	-	AIMH01	7	1576	1467	7/13/12	4/7/17	Scaffold	Broad Institute	SAMN02596912	GCA_000278335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/335/GCA_000278335.1_Bart_vins_Pm136co_V1	-	Pm136co
Bartonella birtlesii E7	1201034	PRJNA168999	168999	Proteobacteria	Alphaproteobacteria	1.83096	37.9	-	ALVF01	11	1624	1280	5/17/13	4/8/17	Scaffold	URMITE	SAMN02472050	GCA_000400145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/145/GCA_000400145.1_ASM40014v1	23611908	E7
Methanosaeta harundinacea	301375	PRJNA278302	278302	Euryarchaeota	Methanomicrobia	2.38296	56.5	-	LGFT01	118	2441	2441	1/8/16	1/8/16	Scaffold	Lawrence Berkeley National Lab	SAMN03445147	GCA_001509375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/375/GCA_001509375.1_ASM150937v1	26787827	-
Pseudomonas psychrotolerans	237610	PRJNA278436	278436	Proteobacteria	Gammaproteobacteria	5.2709	64.8	-	LDSO01	130	4715	4554	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401428	GCA_001476385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/385/GCA_001476385.1_ASM147638v1	26793183	NS2
Rhodococcus rhodochrous ATCC 17895	1330040	PRJNA201088	201088	Terrabacteria group	Actinobacteria	6.86723	62.3	-	ASJJ01	423	6396	6122	9/23/13	4/2/17	Contig	"Delft University of Technology, Department of Biotechnology, Biocatalysis and Organic Chemistry, Julianalaan 136, 2628 BL Delft, the Netherlands"	SAMN02469312	GCA_000469645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/645/GCA_000469645.1_ASM46964v1	-	ATCC 17895
Gordonia polyisoprenivorans HW436	1034768	PRJNA165561	165561	Terrabacteria group	Actinobacteria	6.32872	66.9	-	ARVZ01	1	5671	5483	4/26/13	4/10/17	Contig	DOE Joint Genome Institute	SAMN02256401	GCA_000385355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/355/GCA_000385355.1_ASM38535v1	-	HW436
Janthinobacterium lividum	29581	PRJNA239288	239288	Proteobacteria	Betaproteobacteria	6.21274	62.8	-	JFYR01	44	5554	5412	4/14/14	4/2/17	Contig	Monash University Malaysia	SAMN02676626	GCA_000632025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/025/GCA_000632025.1_Willow_Endophyte_RIT308	24812212	RIT308
Lactobacillus rossiae DSM 15814	1114972	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.86529	43.3	-	AZFF01	61	2712	2624	11/6/15	4/11/17	Contig	Shanghai Majorbio	SAMN02369495	GCA_001435135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/135/GCA_001435135.1_ASM143513v1	26415554	DSM 15814
Wolbachia pipientis wBol1-b	1238452	PRJEB566	182721	Proteobacteria	Alphaproteobacteria	1.37793	33.9	-	CAOH01	144	1293	1139	1/7/13	3/31/17	Contig	UQ	SAMEA2272394	GCA_000333775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/775/GCA_000333775.1_ASM33377v1	-	wBol1-b
Treponema brennaborense DSM 12168	906968	PRJNA53887	53887	Spirochaetes	Spirochaetia	3.05558	51.5	chromosome:NC_015500.1/CP002696.1	-	1	2686	2609	5/5/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713613	GCA_000212415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/212/415/GCA_000212415.1_ASM21241v1	-	DSM 12168
Streptomyces acidiscabies	42234	PRJNA322218	322218	Terrabacteria group	Actinobacteria	10.1995	70.5	-	LYDT01	1211	9599	8330	1/10/17	3/15/17	Contig	University of Florida	SAMN05102460	GCA_001941265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/265/GCA_001941265.1_ASM194126v1	-	98-49
Mycoplasma canis PG 14	1117644	PRJNA77819	77819	Terrabacteria group	Tenericutes	0.867208	27	-	AJFQ01	6	692	631	4/17/12	3/30/17	Contig	University of Florida	SAMN02471767	GCA_000258925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/925/GCA_000258925.1_ASM25892v1	22815452	PG 14
Pseudoalteromonas piscicida ATCC 15057	1279016	PRJNA185296	185296	Proteobacteria	Gammaproteobacteria	5.27711	43.2	-	ARMY01	58	4702	4479	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440494	GCA_000382005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/005/GCA_000382005.1_ASM38200v1	-	ATCC 15057
Pseudoalteromonas rubra	43658	PRJNA242743	242743	Proteobacteria	Gammaproteobacteria	5.76071	48.9	-	JXYA01	165	4821	4654	4/1/15	4/10/17	Contig	Technical University of Denmark	SAMN03323945	GCA_000967655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/655/GCA_000967655.1_S2471	25879706	S2471
Pseudomonas extremaustralis	359110	PRJEB19589	376352	Proteobacteria	Gammaproteobacteria	6.14364	60.9	-	FUYI01	69	5655	5429	3/4/17	3/11/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421862	GCA_900167635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/635/GCA_900167635.1_IMG-taxon_2671180025_annotated_assembly	-	USBA 515
Citrobacter werkmanii NBRC 105721	1114921	PRJDB11	77957	Proteobacteria	Gammaproteobacteria	4.948	52.1	-	BBMW01	30	4856	4642	9/25/14	4/9/17	Contig	National Institute of Technology and Evaluation	SAMD00018685	GCA_000759755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/755/GCA_000759755.1_ASM75975v1	-	NBRC 105721
Neisseria meningitidis M01-240355	935588	PRJNA61063	61063	Proteobacteria	Betaproteobacteria	2.28778	51.5	chromosome:NC_017517.1/CP002422.1	-	1	2617	2221	3/4/11	3/21/17	Complete Genome	University of Maryland School of Medicine	SAMN02604196	GCA_000191485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/485/GCA_000191485.1_ASM19148v1	21368196	M01-240355
Planktothrix agardhii NIVA-CYA 34	213631	PRJNA212881	212881	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.51645	39.5	-	AVFT01	213	4966	4644	9/6/13	4/9/17	Scaffold	University of Oslo	SAMN02261500	GCA_000464725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/725/GCA_000464725.1_NC34_1	23995927	NIVA-CYA 34
Prevotella baroniae DSM 16972 = JCM 13447	1122980	PRJDB571	243149	FCB group	Bacteroidetes/Chlorobi group	3.11615	53	-	BAJF01	94	2630	1916	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00009302	GCA_000613565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/565/GCA_000613565.1_ASM61356v1	-	JCM 13447
Rothia aeria F0474	1125724	PRJNA78909	78909	Terrabacteria group	Actinobacteria	2.58429	56.7	-	AJJQ01	50	2255	2148	4/6/12	4/7/17	Contig	J. Craig Venter Institute	SAMN00792226	GCA_000258205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/205/GCA_000258205.1_RaeriaF0474v1.0	-	F0474
Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536	1125725	PRJNA216958	216958	Spirochaetes	Spirochaetia	2.82669	49.2	-	AVQI01	84	2611	2512	9/16/13	4/9/17	Contig	The J. Craig Venter Institute	SAMN02344580	GCA_000468115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/115/GCA_000468115.1_TsocrATCC35536v1.0	-	ATCC 35536
Pseudomonas oleovorans subsp. oleovorans NBRC 13583 = DSM 1045	1218072	PRJDB245	172068	Proteobacteria	Gammaproteobacteria	4.87077	62.1	-	BDAL01	123	4720	4280	4/4/17	8/15/17	Contig	National Institute of Technology and Evaluation	SAMD00046935	GCA_002091815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/815/GCA_002091815.1_ASM209181v1	-	NBRC 13583
Weissella confusa	1583	PRJNA349218	349218	Terrabacteria group	Firmicutes	2.18164	44.7	-	MNBZ01	44	2206	1875	11/18/16	4/17/17	Contig	University of Otago	SAMN05928586	GCA_001884305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/305/GCA_001884305.1_ASM188430v1	-	MBF8-1
Lactobacillus fermentum CECT 5716	712938	PRJNA43533	43533	Terrabacteria group	Firmicutes	2.10045	51.5	chromosome:NC_017465.1/CP002033.1	-	1	2137	1637	6/29/10	3/30/17	Complete Genome	Universidad Complutense de Madrid	SAMN02604100	GCA_000210515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/515/GCA_000210515.1_ASM21051v1	20639335	CECT 5716
Cupriavidus basilensis	68895	PRJDB3353	274629	Proteobacteria	Betaproteobacteria	7.82608	68.8	-	BBQM01	62	6973	6821	2/4/15	4/10/17	Contig	National Institute of Advanced Industrial Science and Technology (AIST)	SAMD00023459	GCA_000876015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/015/GCA_000876015.1_ASM87601v1	-	KF708
Dyadobacter fermentans DSM 18053	471854	PRJNA20829	20829	FCB group	Bacteroidetes/Chlorobi group	6.96779	51.5	chromosome:NC_013037.1/CP001619.1	-	1	5826	5713	7/31/09	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598437	GCA_000023125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/125/GCA_000023125.1_ASM2312v1	21304649	DSM 18053
Cronobacter malonaticus	413503	PRJNA287482	287482	Proteobacteria	Gammaproteobacteria	4.90242	55.8	-	LGRM01	67	4822	4589	4/17/17	4/21/17	Scaffold	" National Institute for Communicable Disease Control and Prevention,China CDC"	SAMN03782455	GCA_002093915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/915/GCA_002093915.1_ASM209391v1	-	HB03
Lactobacillus mucosae	97478	PRJNA265168	265168	Terrabacteria group	Firmicutes	2.0791	46.7	-	JSWI01	72	2027	1802	12/3/14	4/2/17	Contig	Teagasc	SAMN03145820	GCA_000789175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/175/GCA_000789175.1_ASM78917v1	25593248	DPC 6426
Lactobacillus parafarraginis DSM 18390 = JCM 14109	1423786	PRJNA222257	222257	Terrabacteria group	Firmicutes	3.08167	45.2	-	AZFZ01	254	2973	2791	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369507	GCA_001435895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/895/GCA_001435895.1_ASM143589v1	26415554	DSM 18390
Lactobacillus fermentum IFO 3956	334390	PRJDA18979	18979	Terrabacteria group	Firmicutes	2.09869	51.5	chromosome:NC_010610.1/AP008937.1	-	1	2134	1916	4/16/08	5/10/17	Complete Genome	Kitasato Institute for Life Sciences	SAMD00060917	GCA_000010145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/145/GCA_000010145.1_ASM1014v1	18487258	IFO 3956
Advenella kashmirensis	310575	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	3.24357	55.5	-	DGBK01	340	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456267	GCA_002384805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/805/GCA_002384805.1_ASM238480v1	28894102	-
Thermacetogenium phaeum	85874	PRJNA278302	278302	Terrabacteria group	Firmicutes	1.49764	55	-	LGFO01	301	1627	1627	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445141	GCA_001508215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/215/GCA_001508215.1_ASM150821v1	26787827	-
Megasphaera elsdenii T81	1410663	PRJNA223459	223459	Terrabacteria group	Firmicutes	2.50462	52.8	-	JHXC01	36	2400	2252	4/8/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02744015	GCA_000621885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/885/GCA_000621885.1_ASM62188v1	-	T81
Gordonia terrae C-6	1316928	PRJNA196464	196464	Terrabacteria group	Actinobacteria	5.17024	67.9	-	AQPW01	130	4667	4536	5/8/13	4/8/17	Contig	Nankai University	SAMN02470574	GCA_000390025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/025/GCA_000390025.1_C-6	23788548	C-6
Streptococcus macedonicus	59310	PRJEB14906	331033	Terrabacteria group	Firmicutes	2.10742	37.5	-	FLZS01	3	2179	1821	7/29/16	7/29/17	Contig	Agricultural University of Athens	SAMEA4354708	GCA_900094105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/105/GCA_900094105.1_ASM90009410v1	-	679
Lactobacillus vini JP7.8.9	1133851	PRJNA81093	81093	Terrabacteria group	Firmicutes	2.27507	37.7	-	AHZA01	837	2376	1745	3/20/12	4/8/17	Contig	Universidade Federal do Rio de Janeiro	SAMN02471381	GCA_000255515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/515/GCA_000255515.2_ASM25551v2	22582376	JP7.8.9
Pseudomonas fragi	296	PRJNA388845	388845	Proteobacteria	Gammaproteobacteria	5.0723	59	chromosome:NZ_CP021986.1/CP021986.1	-	1	4252	3942	6/22/17	6/24/17	Chromosome	"Assam University, Silchar"	SAMN07187748	GCA_002205455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/455/GCA_002205455.1_ASM220545v1	-	DBC
Nocardia brasiliensis NBRC 14402	1206724	PRJDB120	170627	Terrabacteria group	Actinobacteria	8.89509	68.2	-	BAFT02	115	8090	7795	7/13/12	4/9/17	Contig	National Institute of Technology and Evaluation	SAMD00016800	GCA_000308475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/475/GCA_000308475.2_ASM30847v2	24884595	NBRC 14402
Vibrio cyclitrophicus FF75	1136163	PRJNA208628	208628	Proteobacteria	Gammaproteobacteria	5.09002	43.7	-	ATLT01	5	4553	4284	9/30/13	4/2/17	Contig	Wuhan University	SAMN02472128	GCA_000473545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/545/GCA_000473545.1_HGAP	-	FF75
Lactobacillus kisonensis DSM 19906 = JCM 15041	1423766	PRJDB776	243688	Terrabacteria group	Firmicutes	3.00942	41.7	-	BBAU01	108	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000447	GCA_001311425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/425/GCA_001311425.1_ASM131142v1	-	JCM 15041
Moraxella osloensis	34062	PRJNA375758	375758	Proteobacteria	Gammaproteobacteria	2.59601	43.7	-	NCXF01	112	2294	2195	8/29/17	8/30/17	Contig	SysMilk	SAMN06718506	GCA_002276465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/465/GCA_002276465.1_ASM227646v1	-	OG2
Enterococcus dispar	44009	PRJNA270385	270385	Terrabacteria group	Firmicutes	2.75548	37	-	JXKN01	75	2621	2559	11/25/16	4/14/17	Contig	Inner Mongolia Agricultural University	SAMN03267170	GCA_001886105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/105/GCA_001886105.1_ASM188610v1	-	DSM 6630
Enterococcus cecorum DSM 20682 = ATCC 43198	1121864	PRJNA82533	82533	Terrabacteria group	Firmicutes	2.42007	36.6	-	AHYS01	5	2455	2293	10/29/13	4/2/17	Scaffold	Broad Institute	SAMN00779860	GCA_000492155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/155/GCA_000492155.1_Ente_ceco_ATCC43198_V2	-	ATCC 43198
Sphingomonas melonis C3	1090316	PRJNA82285	82285	Proteobacteria	Alphaproteobacteria	3.92964	67.2	-	AQUJ01	4	3726	3621	4/19/13	4/8/17	Contig	JGI	SAMN02261306	GCA_000371765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/765/GCA_000371765.1_ASM37176v1	-	C3
Enterococcus avium	33945	PRJNA267549	267549	Terrabacteria group	Firmicutes	4.27522	38.9	-	JUZB01	369	4227	3988	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197839	GCA_001057755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/755/GCA_001057755.1_ASM105775v1	26230489	639_EFCM
Enterococcus columbae DSM 7374 = ATCC 51263	1121865	PRJNA191886	191886	Terrabacteria group	Firmicutes	2.5451	36.4	-	ASWJ01	9	2400	2307	5/31/13	4/8/17	Scaffold	Broad Institute	SAMN02596961	GCA_000407225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/225/GCA_000407225.1_Ente_colu_ATCC51263_V2	-	ATCC 51263
Syntrophus aciditrophicus SB	56780	PRJNA16258	16258	Proteobacteria	delta/epsilon subdivisions	3.1793	51.5	chromosome:NC_007759.1/CP000252.1	-	1	2989	2897	1/26/06	4/17/17	Complete Genome	Integrated Genomics	SAMN02603418	GCA_000013405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/405/GCA_000013405.1_ASM1340v1	17442750	SB
Marinovum algicola	42444	PRJEB16814	350993	Proteobacteria	Alphaproteobacteria	5.39676	65	-	FNYY01	62	5198	5023	10/29/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487940	GCA_900109145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/145/GCA_900109145.1_IMG-taxon_2615840718_annotated_assembly	-	FF3
Vibrio ordalii FF-93	617132	PRJNA164841	164841	Proteobacteria	Gammaproteobacteria	3.8447	44.6	-	AJYT02	249	3502	3359	8/13/12	4/13/17	Scaffold	MIT	SAMN02470440	GCA_000287095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/095/GCA_000287095.2_ASM28709v2	22955834	FF-93
Burkholderia seminalis	488731	PRJNA278463	278463	Proteobacteria	Betaproteobacteria	7.67429	67.2	-	LAEU01	84	7164	6799	9/22/16	4/13/17	Contig	Universidade de Sao Paulo	SAMN03418615	GCA_001742345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/345/GCA_001742345.1_ASM174234v1	26959838	TC3.4.2R3
Solibacillus silvestris	76853	PRJNA323940	323940	Terrabacteria group	Firmicutes	4.17944	38.5	-	LZRJ01	132	4132	3956	7/1/16	4/13/17	Contig	California State University Fresno	SAMN05194550	GCA_001677985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/985/GCA_001677985.1_ASM167798v1	-	MROC3
Neisseria meningitidis MC58	122586	PRJNA251	251	Proteobacteria	Betaproteobacteria	2.27236	51.5	chromosome:NC_003112.2/AE002098.2	-	1	2104	1943	2/25/00	8/3/16	Complete Genome	TIGR	SAMN02603997	GCA_000008805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/805/GCA_000008805.1_ASM880v1	10710307	MC58
Campylobacter ureolyticus ACS-301-V-Sch3b	883165	PRJNA52129	52129	Proteobacteria	delta/epsilon subdivisions	1.69846	29.4	-	AGYD01	7	1748	1665	6/21/13	4/8/17	Scaffold	Broad Institute	SAMN02596755	GCA_000413435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/435/GCA_000413435.1_Camp_ureo_ACS-301-V-SCH3B_V1	-	ACS-301-V-Sch3b
Photorhabdus temperata subsp. temperata Meg1	1393735	PRJNA217865	217865	Proteobacteria	Gammaproteobacteria	4.93145	43.2	-	JGVH01	127	4414	4037	7/8/14	4/9/17	Contig	University of New Hampshire	SAMN02338775	GCA_000722995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/995/GCA_000722995.1_Meg1v1	25502670	Meg1
Acinetobacter bereziniae LMG 1003 = CIP 70.12	981324	PRJNA62411	62411	Proteobacteria	Gammaproteobacteria	4.976	38.1	-	AIEI01	372	4933	4304	2/21/12	8/8/17	Contig	University of Birmingham	SAMN02471592	GCA_000248295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/295/GCA_000248295.2_ASM24829v2	23259572	LMG 1003
Acinetobacter parvus DSM 16617 = CIP 108168	981333	PRJNA62427	62427	Proteobacteria	Gammaproteobacteria	2.87804	41.6	-	AIEB01	225	2951	2527	2/21/12	4/10/17	Contig	University of Birmingham	SAMN02471588	GCA_000248155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/155/GCA_000248155.2_ASM24815v2	23259572	DSM 16617
Bifidobacterium asteroides	1684	PRJNA257134	257134	Terrabacteria group	Actinobacteria	2.13239	60.7	-	JWMF01	6	1680	1610	3/31/15	4/10/17	Scaffold	Uppsala university	SAMN03269159	GCA_000967265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/265/GCA_000967265.1_ASM96726v1	-	Bin7
Pelosinus fermentans B4	1149862	PRJNA84241	84241	Terrabacteria group	Firmicutes	5.04011	39.8	-	AKVJ01	76	4668	4530	6/20/12	5/19/17	Contig	ENIGMA	SAMN01057330	GCA_000271505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/505/GCA_000271505.1_Pelosinus.strB4_v1.0	22933770	B4
Pseudomonas mandelii 36MFCvi1.1	1151127	PRJNA182465	182465	Proteobacteria	Gammaproteobacteria	6.55399	59.2	-	ARLP01	29	6044	5853	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440483	GCA_000381285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/285/GCA_000381285.1_ASM38128v1	-	36MFCvi1.1
Pseudomonas fuscovaginae CB98818	1176490	PRJNA160237	160237	Proteobacteria	Gammaproteobacteria	6.54108	61.4	-	ALAQ01	261	6047	4827	7/20/12	5/19/17	Contig	Zhejiang University	SAMN02472171	GCA_000280575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/575/GCA_000280575.1_ASM28057v1	22965098	CB98818
Citrobacter freundii	546	PRJNA335847	335847	Proteobacteria	Gammaproteobacteria	5.55756	51.4847	chromosome:NZ_CP016762.1/CP016762.1; plasmid pOZ172:NZ_CP016763.1/CP016763.1; plasmid pOZ181:NZ_CP016764.1/CP016764.1; plasmid pOZ182:NZ_CP016765.1/CP016765.1	-	4	5609	5254	8/10/16	4/18/17	Complete Genome	Universite Laval	SAMN05464624	GCA_001702455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/702/455/GCA_001702455.1_ASM170245v1	-	B38
Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251	1243616	PRJNA177620	177620	Proteobacteria	Gammaproteobacteria	5.06609	51.4584	chromosome:NZ_CP022135.1/CP022135.1; plasmid unnamed1:NZ_CP022136.1/CP022136.1; plasmid unnamed2:NZ_CP022137.1/CP022137.1	-	3	5005	4630	6/30/17	7/3/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN04160806	GCA_002211825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/825/GCA_002211825.1_ASM221182v1	-	SA20044251
Pseudomonas avellanae BPIC 631	1154758	PRJNA207988	207988	Proteobacteria	Gammaproteobacteria	5.96274	58.5	-	ATDK01	611	5622	5120	8/5/13	4/8/17	Contig	CRA	SAMN02469669	GCA_000444135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/135/GCA_000444135.1_CLC6_0_3	24086635	BPIC 631
Borrelia crocidurae	29520	PRJEB7269	261150	Spirochaetes	Spirochaetia	0.912803	27.7	-	CCXD01	137	886	722	9/18/14	4/10/17	Contig	URMITE	SAMEA2768622	GCA_000825665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/665/GCA_000825665.1_Borrelia_crocidurae_str._03-02	-	2-Mar
Amycolatopsis orientalis DSM 43388	1337957	PRJNA205409	205409	Terrabacteria group	Actinobacteria	8.92038	70	-	ASXG01	197	8397	8126	6/17/13	4/8/17	Contig	KRIBB	SAMN02205103	GCA_000411975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/975/GCA_000411975.1_AO43388_01	23908288	DSM 43388
Neisseria meningitidis	487	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	2.30581	51.4	chromosome:NZ_CP020402.1/CP020402.1	-	1	2649	2257	3/29/17	4/6/17	Complete Genome	US Food and Drug Administration 	SAMN04875552	GCA_002073275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/275/GCA_002073275.1_ASM207327v1	-	FDAARGOS_215
Bradyrhizobium elkanii USDA 3254	1079479	PRJNA165319	165319	Proteobacteria	Alphaproteobacteria	8.97972	63.8	-	AXAH01	85	8497	7977	9/30/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02441448	GCA_000472765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/765/GCA_000472765.1_ASM47276v1	-	USDA 3254
Neisseria meningitidis	487	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	2.30579	51.4	chromosome:NZ_CP020422.1/CP020422.1	-	1	2650	2253	3/29/17	4/1/17	Complete Genome	US Food and Drug Administration 	SAMN04875548	GCA_002073555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/555/GCA_002073555.1_ASM207355v1	-	FDAARGOS_211
Enterococcus malodoratus	71451	PRJNA270385	270385	Terrabacteria group	Firmicutes	4.50883	39.9	-	JXKU01	123	4408	4257	11/25/16	4/16/17	Scaffold	Inner Mongolia Agricultural University	SAMN03267177	GCA_001886025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/025/GCA_001886025.1_ASM188602v1	-	DSM 20681
Enterococcus raffinosus NBRC 100492	1218093	PRJDB266	172089	Terrabacteria group	Firmicutes	4.21036	39.4	-	BCPU01	144	4125	3933	1/26/16	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00045732	GCA_001544115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/115/GCA_001544115.1_ASM154411v1	-	NBRC 100492
Enterococcus villorum	112904	PRJNA342049	342049	Terrabacteria group	Firmicutes	2.99416	34.9	-	MJEA01	42	2817	2609	4/3/17	4/5/17	Contig	Lethbridge Research Centre	SAMN05735024	GCA_002077435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/435/GCA_002077435.1_ASM207743v1	28270110	F1129D 143
Enterococcus asini	57732	PRJNA270385	270385	Terrabacteria group	Firmicutes	2.52472	44.8	-	JXKE01	55	2430	2350	11/25/16	4/14/17	Scaffold	Inner Mongolia Agricultural University	SAMN03267161	GCA_001885725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/725/GCA_001885725.1_ASM188572v1	-	DSM 11492
Enterococcus pallens	160454	PRJNA270385	270385	Terrabacteria group	Firmicutes	5.27015	40	-	JXKX01	195	5095	4948	11/25/16	4/16/17	Scaffold	Inner Mongolia Agricultural University	SAMN03267180	GCA_001886075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/075/GCA_001886075.1_ASM188607v1	-	DSM 15690
Enterococcus haemoperoxidus	155618	PRJNA270385	270385	Terrabacteria group	Firmicutes	3.51911	35.6	-	JXKS01	77	3210	3116	11/25/16	4/14/17	Scaffold	Inner Mongolia Agricultural University	SAMN03267175	GCA_001885985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/985/GCA_001885985.1_ASM188598v1	-	DSM 15920
Enterococcus moraviensis	155617	PRJNA270385	270385	Terrabacteria group	Firmicutes	3.57145	35.9	-	JXKW01	43	3341	3282	11/25/16	4/16/17	Contig	Inner Mongolia Agricultural University	SAMN03267179	GCA_001886065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/065/GCA_001886065.1_ASM188606v1	-	DSM 15919
Enterococcus phoeniculicola	154621	PRJNA270385	270385	Terrabacteria group	Firmicutes	3.86229	36.3	-	JXKY01	78	3511	3435	11/25/16	4/16/17	Scaffold	Inner Mongolia Agricultural University	SAMN03267181	GCA_001886115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/115/GCA_001886115.1_ASM188611v1	-	DSM 14726
Enterococcus caccae	317735	PRJNA270385	270385	Terrabacteria group	Firmicutes	3.53149	35.8	-	JXKJ01	57	3262	3160	11/25/16	4/14/17	Scaffold	Inner Mongolia Agricultural University	SAMN03267166	GCA_001885825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/825/GCA_001885825.1_ASM188582v1	-	DSM 19114
Enterococcus gilvus	160453	PRJNA270385	270385	Terrabacteria group	Firmicutes	4.11153	41.4	-	JXKO01	99	4048	3913	11/25/16	4/14/17	Contig	Inner Mongolia Agricultural University	SAMN03267171	GCA_001885915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/915/GCA_001885915.1_ASM188591v1	-	DSM 15689
Cronobacter dublinensis subsp. dublinensis LMG 23823	1159554	PRJNA89103	89103	Proteobacteria	Gammaproteobacteria	4.57761	57.8	-	AJKZ01	82	4393	4188	6/7/13	4/8/17	Contig	Cronobacter Genus Genome Sequencing Consortium	SAMN02952933	GCA_000409225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/225/GCA_000409225.1_cddub187_final_contigs	23724777	LMG 23823
Cronobacter universalis NCTC 9529	1074000	PRJEB163	181120	Proteobacteria	Gammaproteobacteria	4.52463	57.3	-	CAKX01	231	4773	3632	11/15/12	5/18/17	Scaffold	LifeTech	SAMEA2271931	GCA_000319325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/325/GCA_000319325.1_ASM31932v1	23166675	NCTC 9529
Cutibacterium granulosum TM11	1292373	PRJNA189037	189037	Terrabacteria group	Actinobacteria	2.14036	64.2	-	AOST01	98	1843	1700	9/4/13	4/8/17	Contig	Aarhus University	SAMN02393704	GCA_000464495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/495/GCA_000464495.1_TM11_assembly2012	24053623	TM11
Neisseria meningitidis	487	PRJNA305279	305279	Proteobacteria	Betaproteobacteria	2.26428	51.4	chromosome:NZ_CP015886.1/CP015886.1	-	1	2610	2225	1/30/17	3/21/17	Complete Genome	Public Health Agency of Canada	SAMN04321475	GCA_001974965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/974/965/GCA_001974965.1_ASM197496v1	-	38277
Mycobacterium haemophilum	29311	PRJNA284995	284995	Terrabacteria group	Actinobacteria	4.36943	63.9	-	LDPT01	74	4152	3848	6/8/15	4/10/17	Contig	UCSF	SAMN03734842	GCA_001021415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/415/GCA_001021415.1_ASM102141v1	-	UC1
Neisseria meningitidis	487	PRJNA291330	291330	Proteobacteria	Betaproteobacteria	2.2301	51.4	chromosome:NZ_CP012391.1/CP012391.1	-	1	2563	2197	8/2/16	3/21/17	Complete Genome	JLU	SAMN03944749	GCA_001697105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/105/GCA_001697105.1_ASM169710v1	-	DE8669
Neisseria meningitidis M0579	935590	PRJNA235933	235933	Proteobacteria	Betaproteobacteria	2.32482	51.4	chromosome:NZ_CP007668.1/CP007668.1	-	1	2663	2285	6/19/15	3/21/17	Complete Genome	Griffith University	SAMN02595591	GCA_001029835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/835/GCA_001029835.1_ASM102983v1	25845594	M0579
Cronobacter muytjensii	413501	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.35449	57.6	-	MSAE01	78	4146	3930	12/28/16	4/16/17	Contig	FDA/CFSAN	SAMN04329654	GCA_001922855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/855/GCA_001922855.1_ASM192285v1	-	MOD1-Md1s
Paenibacillus borealis	160799	PRJNA258353	258353	Terrabacteria group	Firmicutes	8.15681	51.4	chromosome:NZ_CP009285.1/CP009285.1	-	1	6999	6776	9/22/14	4/9/17	Complete Genome	Cornell University	SAMN02996607	GCA_000758665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/665/GCA_000758665.1_ASM75866v1	-	DSM 13188
Richelia intracellularis	1164990	PRJEB5207	243336	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.48838	39.2	-	CBZS01	857	7804	7768	4/1/14	10/27/15	Contig	UCSC	SAMEA3138990	GCA_000613065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/065/GCA_000613065.1_RintRC_1	-	RC01
Mycobacterium xenopi 4042	1299334	PRJNA191798	191798	Terrabacteria group	Actinobacteria	5.47737	66	-	JAOB01	93	10826	10769	1/27/14	2/22/14	Contig	Institute for Genome Sciences	SAMN02641614	GCA_000523695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/695/GCA_000523695.1_ASM52369v1	-	4042
Mycobacterium phlei DSM 43072	1335621	PRJNA203528	203528	Terrabacteria group	Actinobacteria	5.31137	69.5	-	ATDR01	84	5115	4938	3/8/16	4/12/17	Contig	Uppasala Univeristy & Jawaharlal Nehru University	SAMN04537321	GCA_001581995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/995/GCA_001581995.1_ASM158199v1	26941228	DSM 43072
Salmonella bongori serovar 48:z41:-- str. RKS3044	1382510	PRJNA214181	214181	Proteobacteria	Gammaproteobacteria	4.3945	51.4	chromosome:NZ_CP006692.1/CP006692.1	-	1	4274	3915	6/17/14	2/26/17	Complete Genome	Harbin Medical University	SAMN03081475	GCA_000709535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/535/GCA_000709535.1_ASM70953v1	24928416	RKS3044
Neisseria meningitidis H44/76	909420	PRJNA61079	61079	Proteobacteria	Betaproteobacteria	2.24088	51.4	chromosome:NC_017516.1/CP002420.1	-	1	2555	2246	3/4/11	3/15/17	Complete Genome	University of Maryland School of Medicine	SAMN02604200	GCA_000191445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/445/GCA_000191445.1_ASM19144v1	21368196	H44/76
Paeniclostridium sordellii	1505	PRJEB8118	277644	Terrabacteria group	Firmicutes	3.45256	27.4	-	CELC01	28	3375	3267	3/10/15	4/4/17	Contig	WTSI	SAMEA1572105	GCA_001372275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/275/GCA_001372275.1_R32977	-	R32977
Neisseria meningitidis M01-240149	935591	PRJNA61069	61069	Proteobacteria	Betaproteobacteria	2.22352	51.4	chromosome:NC_017514.1/CP002421.1	-	1	2577	2220	3/4/11	3/21/17	Complete Genome	University of Maryland School of Medicine	SAMN02604198	GCA_000191465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/465/GCA_000191465.1_ASM19146v1	21368196	M01-240149
Streptomyces globisporus subsp. globisporus	66858	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.63274	72.4	-	JODW01	271	7856	7343	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645220	GCA_000720875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/875/GCA_000720875.1_ASM72087v1	-	NRRL B-2293
Pseudomonas kilonensis	132476	PRJNA290438	290438	Proteobacteria	Gammaproteobacteria	6.38581	60.9	-	LHVH01	44	5758	5559	8/18/15	4/11/17	Contig	JLU	SAMN03891674	GCA_001269885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/885/GCA_001269885.1_ASM126988v1	-	DSM 13647
Oribacterium sp. oral taxon 078 str. F0263	1321782	PRJNA198889	198889	Terrabacteria group	Firmicutes	2.69476	54.8	-	AWVU01	69	2483	2348	9/19/13	4/9/17	Scaffold	Washington University	SAMN02436879	GCA_000469565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/565/GCA_000469565.1_ASM46956v1	-	F0263
Kosakonia radicincitans UMEnt01/12	1455607	PRJNA236629	236629	Proteobacteria	Gammaproteobacteria	5.78377	53.9	-	JDYJ01	71	5562	5325	5/15/14	4/9/17	Contig	Institute of Biological Science	SAMN02641225	GCA_000691205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/205/GCA_000691205.1_UMEnt01_12.1	25047976	UMEnt01/12
Alcanivorax jadensis	64988	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.64075	57.6	-	DELQ01	121	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451359	GCA_002354495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/495/GCA_002354495.1_ASM235449v1	28894102	-
Bacillus siamensis	659243	PRJNA321938	321938	Terrabacteria group	Firmicutes	3.97059	45.8	-	LYUE01	45	3961	3762	6/15/16	4/12/17	Contig	Microbial Institue for Fermentation Industry	SAMN05162508	GCA_001662915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/915/GCA_001662915.1_ASM166291v1	-	SRCM100169
Thalassospira xiamenensis	220697	PRJNA305772	305772	Proteobacteria	Alphaproteobacteria	4.79083	54.7	-	LPXL01	62	4495	4366	4/8/16	4/12/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN04332633	GCA_001618165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/165/GCA_001618165.1_ASM161816v1	-	MCCC 1A03005
Staphylococcus lentus	42858	PRJNA311173	311173	Terrabacteria group	Firmicutes	2.69719	31.8	-	LSKV01	86	2654	2556	5/25/16	4/12/17	Contig	Nofima	SAMN04479461	GCA_001651345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/345/GCA_001651345.1_ASM165134v1	27375578	MF1767
Lysinibacillus boronitolerans F1182	1179224	PRJNA162449	162449	Terrabacteria group	Firmicutes	4.46136	37.5	-	AJXM01	309	-	-	8/10/12	1/8/14	Contig	Korea Food Research Institute	SAMN02470144	GCA_000286375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/375/GCA_000286375.1_LysBor1.0	23045499	F1182
Neisseria meningitidis M04-240196	935593	PRJNA61073	61073	Proteobacteria	Betaproteobacteria	2.25045	51.4	chromosome:NC_017515.1/CP002423.1	-	1	2562	2221	3/4/11	3/21/17	Complete Genome	University of Maryland School of Medicine	SAMN02604199	GCA_000191505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/505/GCA_000191505.1_ASM19150v1	21368196	M04-240196
Neisseria meningitidis 8013	604162	PRJEA34687	34687	Proteobacteria	Betaproteobacteria	2.27755	51.4	chromosome:NC_017501.1/FM999788.1	-	1	2605	2226	10/15/09	3/21/17	Complete Genome	INSERM	SAMEA2272745	GCA_000026965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/965/GCA_000026965.1_ASM2696v1	19818133	8013
"Salmonella enterica subsp. arizonae serovar 62:z4,z23:-"	41514	PRJNA13030	13030	Proteobacteria	Gammaproteobacteria	4.6008	51.4	chromosome:NC_010067.1/CP000880.1	-	1	4612	4136	11/21/07	2/26/17	Complete Genome	The Salmonella enterica serovar Arizonae Genome Sequencing Project	SAMN02604141	GCA_000018625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/625/GCA_000018625.1_ASM1862v1	-	RSK2980
Flavobacterium sp. 316	1603293	PRJNA272836	272836	FCB group	Bacteroidetes/Chlorobi group	3.97175	29.5	-	JYGZ01	17	3624	3492	2/24/15	4/10/17	Scaffold	University of Gdansk	SAMN03287308	GCA_000967805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/805/GCA_000967805.1_ASM96780v1	27034490	316
Bacillus altitudinis	293387	PRJNA285407	285407	Terrabacteria group	Firmicutes	3.97216	41	-	LDPI01	85	4211	4031	6/19/15	4/10/17	Contig	Rochester Institute of Technology	SAMN03753582	GCA_001029865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/865/GCA_001029865.1_RIT380_V1	26227604	RIT380
Frankia sp. CN3	298655	PRJNA61207	61207	Terrabacteria group	Actinobacteria	9.97859	71.8	-	AGJN02	2	8183	7749	11/15/11	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02256511	GCA_000235425.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/425/GCA_000235425.3_ASM23542v3	23516212	CN3
Pyrobaculum aerophilum str. IM2	178306	PRJNA172	172	TACK group	Crenarchaeota	2.22243	51.4	chromosome:AE009441.1	-	1	2706	2605	1/24/02	1/31/14	Complete Genome	UCLA/CalTech	SAMN02604075	GCA_000007225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/225/GCA_000007225.1_ASM722v1	-	IM2
Clostridium sp. DL-VIII	641107	PRJNA42093	42093	Terrabacteria group	Firmicutes	6.47736	30.1	chromosome:NZ_CM001240.1/CM001240.1	AFWX01	1	5929	5613	9/29/11	5/18/17	Chromosome	DOE Joint Genome Institute	SAMN02256530	GCA_000230835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/835/GCA_000230835.1_ASM23083v1	23929491	DL-VIII
Lactobacillus oris	1632	PRJNA312001	312001	Terrabacteria group	Firmicutes	3.236	51.3594	chromosome:CP014787.1; plasmid unnamed1:CP014788.1; plasmid unnamed2:CP014789.1	-	3	3207	2868	3/30/16	3/30/16	Complete Genome	Xintai People Hospital	SAMN04491455	GCA_001602195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/195/GCA_001602195.1_ASM160219v1	-	J-1
Salmonella enterica subsp. diarizonae	59204	PRJNA276399	276399	Proteobacteria	Gammaproteobacteria	4.86945	51.3215	chromosome:NZ_CP011289.1/CP011289.1; plasmid unnamed1:NZ_CP011290.1/CP011290.1; plasmid unnamed2:NZ_CP011291.1/CP011291.1	-	3	4803	4442	4/22/16	3/1/17	Complete Genome	Robert Koch-Institut	SAMN03371464	GCA_001629755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/629/755/GCA_001629755.1_ASM162975v1	-	11-01853
Ruegeria sp. ANG-S4	1577904	PRJNA269051	269051	Proteobacteria	Alphaproteobacteria	4.5382	57.3	-	JWLK01	20	4422	4355	1/2/15	4/10/17	Contig	University of Connecticut	SAMN03246067	GCA_000814005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/005/GCA_000814005.1_ASM81400v1	25755651	ANG-S4
Nitrosomonas sp. Nm132	1881053	PRJEB15933	348253	Proteobacteria	Betaproteobacteria	3.20504	46.6	-	FNDH01	135	2984	2736	10/20/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428952	GCA_900100485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/485/GCA_900100485.1_IMG-taxon_2675903038_annotated_assembly	-	Nm132
Salmonella enterica subsp. diarizonae	59204	PRJNA276399	276399	Proteobacteria	Gammaproteobacteria	4.8694	51.3215	chromosome:NZ_CP011292.1/CP011292.1; plasmid unnamed1:NZ_CP011293.1/CP011293.1; plasmid unnamed2:NZ_CP011294.1/CP011294.1	-	3	4804	4443	4/22/16	3/1/17	Complete Genome	Robert Koch-Institut	SAMN03371465	GCA_001629775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/629/775/GCA_001629775.1_ASM162977v1	-	11-01854
Salmonella bongori serovar 66:z41:- str. SA19983605	1243617	PRJNA177621	177621	Proteobacteria	Gammaproteobacteria	4.46896	51.3	chromosome:NZ_CP022120.1/CP022120.1	-	1	4393	4075	6/30/17	7/3/17	Complete Genome	Laboratory for Foodborne Zoonoses	SAMN04160809	GCA_002211925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/925/GCA_002211925.1_ASM221192v1	-	SA19983605
Actinobacteria bacterium IMCC26077	1848755	PRJNA321007	321007	Terrabacteria group	Actinobacteria	1.55161	51.3	chromosome:NZ_CP015606.1/CP015606.1	-	1	1574	1508	2/16/17	9/4/17	Complete Genome	Inha University	SAMN04961846	GCA_002284915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/915/GCA_002284915.1_ASM228491v1	28186143	IMCC26077
Staphylococcus sp. M0480	1388318	PRJNA216488	216488	Terrabacteria group	Firmicutes	2.28699	31.5	-	JCGQ01	48	2272	2188	2/4/14	4/9/17	Scaffold	Broad Institute	SAMN02325442	GCA_000556525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/525/GCA_000556525.1_Stap_sp_M0480_V1	-	M0480
Corynebacterium sp. HFH0082	1078764	PRJNA72477	72477	Terrabacteria group	Actinobacteria	2.49322	58.8	-	AGEM01	1	2162	2069	6/13/13	4/8/17	Scaffold	Broad Institute	SAMN02596730	GCA_000411235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/235/GCA_000411235.1_Cory_sp_HFH0082_V1	-	HFH0082
Herminiimonas arsenitoxidans	1809410	PRJEB17872	361349	Proteobacteria	Betaproteobacteria	3.78432	51.3	chromosome I:NZ_LT671418.1/LT671418.1	-	1	3565	3481	1/14/17	4/17/17	Complete Genome	JEJU NATIONAL UNIVERSITY	SAMEA4545685	GCA_900130075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/075/GCA_900130075.1_Herminiimonas_arsenitoxidans	-	AS8
Escherichia sp. 1_1_43	457400	PRJNA32463	32463	Proteobacteria	Gammaproteobacteria	4.83642	50.2	-	ACID02	47	4928	4611	4/2/09	2/22/17	Scaffold	Broad Institute	SAMN02463703	GCA_000159895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/895/GCA_000159895.2_Escherichia_sp_1_1_43_V2	-	1_1_43
Rufibacter sp. DG31D	1379910	PRJNA273395	273395	FCB group	Bacteroidetes/Chlorobi group	4.82079	51.3	chromosome:NZ_CP010777.1/CP010777.1	-	1	3967	3875	7/15/15	4/10/17	Complete Genome	Seoul Women's University	SAMN03291399	GCA_001078055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/055/GCA_001078055.1_ASM107805v1	-	DG31D
Erwinia sp. Leaf53	1736225	PRJNA297956	297956	Proteobacteria	Gammaproteobacteria	5.11552	59.1	-	LMLK01	27	4728	4529	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151605	GCA_001422605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/605/GCA_001422605.1_Leaf53	26633631	Leaf53
Leptospirillum sp. Group II 'C75'	1159328	PRJNA158725	158725	Nitrospirae	Nitrospira	2.60531	54.4	-	AIJM01	86	2528	2528	5/11/12	8/12/14	Scaffold	University of California Berkeley	SAMN02954275	GCA_000262365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/365/GCA_000262365.1_Leptospirillum_GroupII_C75	22539719	-
Nocardia sp. CNY236	1169152	PRJNA198541	198541	Terrabacteria group	Actinobacteria	5.30467	65.1	-	AXVD01	75	4930	4660	10/25/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441444	GCA_000482385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/385/GCA_000482385.1_ASM48238v1	-	CNY236
Thermotoga caldifontis AZM44c09	1408159	PRJDB1508	242319	Thermotogae	Thermotogae	2.01491	51.3	chromosome:NZ_AP014509.1/AP014509.1	-	1	2000	1937	3/20/14	4/10/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00061022	GCA_000828655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/655/GCA_000828655.1_ASM82865v1	24676729	AZM44c09
Salmonella bongori NCTC 12419	218493	PRJNA351	351	Proteobacteria	Gammaproteobacteria	4.46011	51.3	chromosome:NC_015761.1/FR877557.1	-	1	4382	4068	7/6/11	5/28/17	Complete Genome	Sanger Institute	SAMEA3138409	GCA_000252995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/995/GCA_000252995.1_ASM25299v1	21876672	NCTC 12419
Methylomonas methanica MC09	857087	PRJNA53917	53917	Proteobacteria	Gammaproteobacteria	5.05168	51.3	chromosome:NC_015572.1/CP002738.1	-	1	4617	4467	5/24/11	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713628	GCA_000214665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/665/GCA_000214665.1_ASM21466v1	22123758	MC09
Neisseria meningitidis NZ-05/33	935589	PRJNA61065	61065	Proteobacteria	Betaproteobacteria	2.24897	51.3	chromosome:NC_017518.1/CP002424.1	-	1	2595	2222	3/4/11	3/21/17	Complete Genome	University of Maryland School of Medicine	SAMN02604197	GCA_000191525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/525/GCA_000191525.1_ASM19152v1	21368196	NZ-05/33
Bifidobacterium sp. A11	1394176	PRJNA217457	217457	Terrabacteria group	Actinobacteria	2.17929	60.3	-	AWUO01	38	1783	1709	11/25/13	4/9/17	Contig	University of Arizona	SAMN02338864	GCA_000499185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/185/GCA_000499185.1_Bifidobacterium_strain_A11	-	A11
Thermococcus onnurineus NA1	523850	PRJNA20773	20773	Euryarchaeota	Thermococci	1.84761	51.3	chromosome:NC_011529.1/CP000855.1	-	1	2024	1934	11/6/08	4/17/17	Complete Genome	Korea Ocean Research & Development Institute	SAMN02603476	GCA_000018365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/365/GCA_000018365.1_ASM1836v1	18790866	NA1
Chlorobium limicola DSM 245	290315	PRJNA12606	12606	FCB group	Bacteroidetes/Chlorobi group	2.76318	51.3	chromosome:NC_010803.1/CP001097.1	-	1	2570	2432	6/4/08	4/6/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598270	GCA_000020465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/465/GCA_000020465.1_ASM2046v1	-	DSM 245
Nocardiopsis sp. TP-A0876	614215	PRJDB2904	251828	Terrabacteria group	Actinobacteria	5.86111	69.7	-	BAZE01	25	5170	5011	6/14/14	4/17/17	Scaffold	National Institute of Technology and Evaluation	SAMD00017647	GCA_000710955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/955/GCA_000710955.1_ASM71095v1	-	NBRC 110039
Salmonella bongori N268-08	1197719	PRJNA168043	168043	Proteobacteria	Gammaproteobacteria	4.77354	51.2793	chromosome:NC_021870.1/CP006608.1; plasmid RM1:NC_021871.1/CP006609.1	-	2	4778	4412	7/23/13	2/26/17	Complete Genome	"Institute of Food, Nutrition and Health, ETH Zurich"	SAMN02603391	GCA_000439255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/255/GCA_000439255.1_ASM43925v1	-	N268-08
Polaromonas sp. EUR3 1.2.1	1305734	PRJNA195644	195644	Proteobacteria	Betaproteobacteria	4.4025	59.9	-	JIBH01	3	4206	3950	4/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743915	GCA_000688115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/115/GCA_000688115.1_ASM68811v1	-	EUR3 1.2.1
Thermus sp. 2.9	1577051	PRJNA268471	268471	Terrabacteria group	Deinococcus-Thermus	2.40418	67.3	-	JTJB01	62	2623	2324	12/4/14	4/9/17	Contig	INTA	SAMN03220282	GCA_000794385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/385/GCA_000794385.1_ASM79438v1	25593256	2.9
Thermoanaerobacter sp. X561	588857	PRJNA33613	33613	Terrabacteria group	Firmicutes	2.45064	34.5	-	ACXP02	8	2482	2320	8/21/09	4/17/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN02441785	GCA_000175775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/775/GCA_000175775.1_ASM17577v1	-	X561
Shigella boydii	621	PRJNA284097	284097	Proteobacteria	Gammaproteobacteria	4.57425	51.2	chromosome:NZ_CP011511.1/CP011511.1	-	1	4961	4142	6/3/15	8/8/17	Complete Genome	KRIBB	SAMN03699691	GCA_001027225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/225/GCA_001027225.1_ASM102722v1	-	ATCC 9210
Gillisia sp. CAL575	985255	PRJNA191085	191085	FCB group	Bacteroidetes/Chlorobi group	3.64672	33.9	-	APHJ01	54	3244	3138	5/31/13	4/17/17	Contig	University of Florence	SAMN02471749	GCA_000403785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/785/GCA_000403785.1_ASM40378v1	-	CAL575
Paenibacillus sp. FSL R7-0331	1536773	PRJNA258352	258352	Terrabacteria group	Firmicutes	6.93197	51.2	chromosome:NZ_CP009284.1/CP009284.1	-	1	6066	5860	9/22/14	4/9/17	Complete Genome	Cornell University	SAMN02996606	GCA_000758645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/645/GCA_000758645.1_ASM75864v1	-	FSL R7-0331
Prevotella sp. oral taxon 472 str. F0295	619693	PRJNA38731	38731	FCB group	Bacteroidetes/Chlorobi group	3.6355	46.8	-	ACZS01	39	2838	2619	10/6/09	4/17/17	Scaffold	Baylor College of Medicine	SAMN00216890	GCA_000163495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/495/GCA_000163495.1_ASM16349v1	-	F0295
Enterococcus sp. HMSC14A10	1581096	PRJNA269865	269865	Terrabacteria group	Firmicutes	4.44215	39.2	-	LTZR01	153	4412	4217	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03433343	GCA_001807055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/055/GCA_001807055.1_ASM180705v1	-	HMSC14A10
Lactobacillus sp. 7_1_47FAA	665945	PRJNA40031	40031	Terrabacteria group	Firmicutes	1.27472	32.8	-	ACWR01	12	1241	1132	10/3/11	4/17/17	Scaffold	Broad Institute	SAMN02463801	GCA_000227195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/195/GCA_000227195.1_Lactobacillus_sp_7_1_47FAA_V1	-	7_1_47FAA
Methylomonas sp. MK1	1131552	PRJNA183356	183356	Proteobacteria	Gammaproteobacteria	5.23359	51.5	-	AQOV01	5	4790	4625	4/12/13	5/19/17	Contig	"Joint Genome Institute, U.S. Department of Energy"	SAMN02441753	GCA_000365425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/425/GCA_000365425.1_ASM36542v1	25767239	MK1
Deinococcus sp. RL	1489678	PRJNA244453	244453	Terrabacteria group	Deinococcus-Thermus	2.79207	69.4	-	JMQF01	62	2736	2605	6/16/14	4/9/17	Contig	University of Delhi	SAMN02746165	GCA_000708185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/185/GCA_000708185.1_ASM70818v1	25035332	RL
Methylophilus sp. 42	1115834	PRJNA157219	157219	Proteobacteria	Betaproteobacteria	2.96834	50.4	-	ARAC01	1	2827	2771	4/22/13	6/20/17	Scaffold	JGI	SAMN02261247	GCA_000384155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/155/GCA_000384155.1_ASM38415v1	-	42
Novosphingobium sp. MBES04	1206458	PRJDB3093	268640	Proteobacteria	Alphaproteobacteria	5.36145	64.8	-	BBNP01	33	4769	4287	11/26/14	4/17/17	Scaffold	Japan Agency for Marine-Earth Science and Technology	SAMD00019870	GCA_000813185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/185/GCA_000813185.1_ASM81318v1	25593249	MBES04
Treponema sp. JC4	1124982	PRJNA78303	78303	Spirochaetes	Spirochaetia	3.03205	40.3	-	AJGU01	147	2733	2574	4/10/12	4/7/17	Contig	Commonwealth Scientific and Industrial Research Organisation	SAMN00828826	GCA_000260795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/795/GCA_000260795.1_ASM26079v1	22815447	JC4
Methylosinus sp. R-45379	980563	PRJNA315280	315280	Proteobacteria	Alphaproteobacteria	4.97422	64.4	-	LUUM01	319	4681	4393	5/16/16	4/17/17	Contig	Ghent University	SAMN04555172	GCA_001644125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/125/GCA_001644125.1_ASM164412v1	-	R-45379
Methanobrevibacter sp. A27	1860099	PRJNA324744	324744	Euryarchaeota	Methanobacteria	1.80987	30.1	-	LZPL01	58	1824	1744	9/16/16	4/13/17	Contig	"Australian Centre for Ecogenomics, The University of Queensland"	SAMN05224565	GCA_001729385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/385/GCA_001729385.1_ASM172938v1	-	A27
Arcobacter sp. AF1028	1355368	PRJNA235195	235195	Proteobacteria	delta/epsilon subdivisions	2.41479	27.2	-	JART01	46	2394	2285	3/3/14	4/9/17	Scaffold	Agriculture and Agri-Food Canada	SAMN02951873	GCA_000585175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/175/GCA_000585175.1_Arcobacter_septicus_AF1028	24699950	AF1028
Paenibacillus sp. Y412MC10	481743	PRJNA27777	27777	Terrabacteria group	Firmicutes	7.12167	51.2	chromosome:NC_013406.1/CP001793.1	-	1	6348	6156	10/14/09	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00191238	GCA_000024685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/685/GCA_000024685.1_ASM2468v1	23408395	Y412MC10
Pseudanabaena sp. 'Roaring Creek'	1681830	PRJNA289505	289505	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.47781	43.3	-	LIRE01	770	4884	4632	10/22/15	4/11/17	Contig	Bucknell University	SAMN03854406	GCA_001402795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/795/GCA_001402795.1_ASM140279v1	-	Roaring Creek
Geitlerinema sp. PCC 9228	111611	PRJNA302164	302164	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.79598	48.8	-	LNDC01	223	4095	3883	11/8/16	4/17/17	Scaffold	University of Michigan	SAMN04267304	GCA_001870905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/905/GCA_001870905.1_ASM187090v1	27790189	PCC 9228
Anabaena sp. PCC 7108	163908	PRJNA158737	158737	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.88674	38.8	-	AJWF01	3	5180	4930	1/17/13	5/18/17	Scaffold	JGI	SAMN02261341	GCA_000332135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/135/GCA_000332135.1_ASM33213v1	23277585	PCC 7108
Fischerella sp. PCC 9339	1174528	PRJNA159505	159505	Terrabacteria group	Cyanobacteria/Melainabacteria group	8.00826	40.2	-	ALVS01	13	6736	6288	11/27/12	4/8/17	Scaffold	JGI	SAMN02261257	GCA_000315585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/585/GCA_000315585.1_ASM31558v1	23277585	PCC 9339
Citrobacter sp. 30_2	469595	PRJNA32453	32453	Proteobacteria	Gammaproteobacteria	5.02321	51.8	-	ACDJ02	9	4944	4686	2/18/09	4/17/17	Scaffold	Broad Institute	SAMN02463699	GCA_000158355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/355/GCA_000158355.2_Citrobacter_sp_30_2_V2	-	30_2
Lactobacillus fermentum	1613	PRJDB5494	369650	Terrabacteria group	Firmicutes	2.01242	51.1759	chromosome:AP017973.1; plasmid pLF25067:AP017974.1	-	2	2094	2020	1/28/17	4/1/17	Complete Genome	Obihiro University of Agriculture and Veterinary Medicine	SAMD00073748	GCA_002356135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/135/GCA_002356135.1_ASM235613v1	-	MTCC 25067
Herbaspirillum sp. GW103	1175306	PRJNA158921	158921	Proteobacteria	Betaproteobacteria	5.04765	62.5	-	AJVC01	6	4561	4435	5/4/12	5/18/17	Contig	Chonbuk National University	SAMN02469572	GCA_000261365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/365/GCA_000261365.1_ASM26136v1	22815460	GW103
Amycolatopsis sp. KNN50.9b	2018303	PRJNA393245	393245	Terrabacteria group	Actinobacteria	7.31098	71.9	-	NMUK01	244	7085	6733	7/27/17	8/1/17	Contig	University of Tuebingen	SAMN07326614	GCA_002234605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/234/605/GCA_002234605.1_ASM223460v1	-	KNN50.9b
Neisseria meningitidis	487	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	2.39744	51.1	chromosome:NZ_CP020401.1/CP020401.1	-	1	2760	2318	3/29/17	4/11/17	Complete Genome	US Food and Drug Administration 	SAMN04875551	GCA_002073235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/235/GCA_002073235.1_ASM207323v1	-	FDAARGOS_214
Paracoccus sp. TRP	412597	PRJNA60841	60841	Proteobacteria	Alphaproteobacteria	3.91519	62.9	-	AEPN01	119	3912	3740	1/10/11	4/17/17	Contig	"Graduate School, Chinese Academy of Agricultural Sciences (CAAS)"	SAMN02469497	GCA_000185925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/925/GCA_000185925.2_ASM18592v1	21257769	TRP
Nocardioides sp. Iso805N	1283287	PRJNA186468	186468	Terrabacteria group	Actinobacteria	4.43413	70	-	AQOZ01	24	4174	4062	4/15/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02441410	GCA_000364605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/605/GCA_000364605.1_ASM36460v1	-	Iso805N
Paraburkholderia mimosarum LMG 23256 = NBRC 106338	1038869	PRJDB255	172078	Proteobacteria	Betaproteobacteria	8.49122	63.9	-	BBJJ01	381	7711	7113	7/25/14	4/9/17	Contig	National Institute of Technology and Evaluation	SAMD00000357	GCA_000739815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/815/GCA_000739815.1_ASM73981v1	-	NBRC 106338
Epulopiscium sp. SCG-C06WGA-EpuloA1	1712381	PRJNA294498	294498	Terrabacteria group	Firmicutes	1.1228	31.4	-	LJHH01	160	1061	948	2/2/17	2/2/17	Contig	King Abdullah University of Science and Technology (KAUST)	SAMN04038471	GCA_001983515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/515/GCA_001983515.1_ASM198351v1	-	-
Erythrobacter sp. SG61-1L	1603897	PRJNA273170	273170	Proteobacteria	Alphaproteobacteria	3.77191	63	-	JXQC01	3	3630	3545	10/2/15	4/11/17	Scaffold	CSIRO	SAMN03288803	GCA_001305965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/305/965/GCA_001305965.1_ASM130596v1	26386069	SG61-1L
Sulfitobacter sp. NAS-14.1	314267	PRJNA13591	13591	Proteobacteria	Alphaproteobacteria	4.01052	60	-	AALZ01	11	3937	3757	12/22/05	4/17/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436108	GCA_000152645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/645/GCA_000152645.1_ASM15264v1	-	NAS-14.1
Agrobacterium genomosp. 7 str. Zutra 3/1	1183427	PRJEB12193	379237	Proteobacteria	Alphaproteobacteria	5.75396	59.8	-	FBWG01	4	5553	5289	3/16/17	4/3/17	Scaffold	Genoscope CEA	SAMEA3722816	GCA_900013515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/515/GCA_900013515.1_AHY_PRJEB12193_v1	-	Zutra 3-1
Polaribacter sp. SA4-12	1312072	PRJNA357130	357130	FCB group	Bacteroidetes/Chlorobi group	3.99026	29.7	chromosome:NZ_CP019334.1/CP019334.1	-	1	3446	3355	6/2/17	6/5/17	Chromosome	"Atmosphere and Ocean Research Institute, The University of Tokyo"	SAMN06133351	GCA_002163675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/675/GCA_002163675.1_ASM216367v1	-	SA4-12
Negativicoccus massiliensis	1702287	PRJEB18760	360088	Terrabacteria group	Firmicutes	1.36059	51.1	chromosome contig00001:NZ_LT700188.1/LT700188.1	-	1	1350	1274	1/5/17	4/16/17	Complete Genome	URMITE	SAMEA37238668	GCA_900155405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/405/GCA_900155405.1_PRJEB18760	-	AT7
Thermococcus piezophilus	1712654	PRJNA320084	320084	Euryarchaeota	Thermococci	1.9288	51.1	chromosome:NZ_CP015520.1/CP015520.1	-	1	2151	1856	5/18/16	4/12/17	Complete Genome	Institut National des Sciences Appliquees de Lyon	SAMN04915575	GCA_001647085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/085/GCA_001647085.1_ASM164708v1	27417831	CDGS
Nitrobacter sp. 62-23	1895798	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	3.79403	62	-	MKSM01	142	3525	3304	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660529	GCA_001897285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/285/GCA_001897285.1_ASM189728v1	-	-
Photobacterium sp. J15	265901	PRJNA311139	311139	Proteobacteria	Gammaproteobacteria	5.68454	46.4	-	LSNH01	3	5068	4779	6/3/16	4/17/17	Contig	"Enzyme and Microbial Technology Research Centre (EMTech), Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia"	SAMN04479200	GCA_001655635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/635/GCA_001655635.1_ASM165563v1	-	J15
Roseovarius sp. MCTG156(2b)	1354722	PRJNA225847	225847	Proteobacteria	Alphaproteobacteria	5.11378	60.7	-	JQLS01	8	5043	4840	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02744769	GCA_000744325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/325/GCA_000744325.1_ASM74432v1	-	MCTG156(2b)
Marinomonas sp. S3726	579484	PRJNA242743	242743	Proteobacteria	Gammaproteobacteria	5.41218	40.3	-	JXYC01	100	5043	4906	4/1/15	4/17/17	Contig	Technical University of Denmark	SAMN03323953	GCA_000967665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/665/GCA_000967665.1_S3726	25879706	S3726
Roseobacter sp. CCS2	391593	PRJNA18995	18995	Proteobacteria	Alphaproteobacteria	3.49733	55.5	-	AAYB01	11	3564	3479	3/7/07	4/17/17	Contig	Gordon and Betty Moore Foundation Microbial Genome Sequencing Project	SAMN02436102	GCA_000169435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/435/GCA_000169435.1_ASM16943v1	-	CCS2
Paenibacillus sp. FSL P4-0081	1536769	PRJNA258346	258346	Terrabacteria group	Firmicutes	8.42305	51.1	chromosome:NZ_CP009280.1/CP009280.1	-	1	7302	7001	9/22/14	4/9/17	Complete Genome	Cornell University	SAMN02996513	GCA_000758565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/565/GCA_000758565.1_ASM75856v1	-	FSL P4-0081
Paenibacillus sp. FSL R5-0912	1536771	PRJNA258348	258348	Terrabacteria group	Firmicutes	7.71852	51.1	chromosome:NZ_CP009282.1/CP009282.1	-	1	6662	6401	9/22/14	4/9/17	Complete Genome	Cornell University	SAMN02996515	GCA_000758605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/605/GCA_000758605.1_ASM75860v1	-	FSL R5-0912
Pectobacterium atrosepticum	29471	PRJNA247436	247436	Proteobacteria	Gammaproteobacteria	5.00493	51.1	chromosome:NZ_CP007744.1/CP007744.1	-	1	4514	4283	5/30/14	4/2/17	Complete Genome	Agricultural University of Hebei	SAMN02797737	GCA_000696465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/465/GCA_000696465.1_ASM69646v1	-	JG10-08
Psychromonas sp. CD1	1979839	PRJNA382855	382855	Proteobacteria	Gammaproteobacteria	1.68823	36.9	-	NDFH01	3	1591	1489	8/1/17	8/21/17	Scaffold	Hong Kong University of Science and Technology	SAMN06754900	GCA_002239585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/585/GCA_002239585.1_ASM223958v1	-	CD1
Dehalococcoides sp. JdFR-58	1935051	PRJNA269163	269163	Terrabacteria group	Chloroflexi	0.9082	54.8	-	MTNT01	203	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226375	GCA_002010455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/455/GCA_002010455.1_ASM201045v1	28350381	-
Caulobacter sp. Root342	1736519	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	5.25882	68.1	-	LMDD01	13	4793	4661	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155788	GCA_001425725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/725/GCA_001425725.1_Root342	26633631	Root342
Escherichia coli	562	PRJNA238952	238952	Proteobacteria	Gammaproteobacteria	4.75863	51.1	chromosome:NZ_CP007265.1/CP007265.1	-	1	4948	4524	3/19/14	2/23/17	Complete Genome	University of Antwerpen	SAMN02647163	GCA_000597845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/845/GCA_000597845.1_ASM59784v1	24723707	ST540
Geobacter sp. DSM 9736	1277350	PRJEB21363	391116	Proteobacteria	delta/epsilon subdivisions	3.95778	56.1	chromosome I:NZ_LT896716.1/LT896716.1	-	1	3545	3436	6/23/17	6/28/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN06269301	GCA_900187405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/405/GCA_900187405.1_IMG-taxon_2728369264_annotated_assembly	-	DSM 9736
Brevibacillus sp. BC25	1144308	PRJNA83039	83039	Terrabacteria group	Firmicutes	6.27908	47.2	-	AKIX01	140	5992	5713	7/27/12	5/18/17	Contig	Oak Ridge National Lab	SAMN00839616	GCA_000282075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/075/GCA_000282075.1_Brevibacillus.strBC25_v1.0	23045501	BC25
Anaeromyxobacter sp. PSR-1	1300915	PRJDB2902	279059	Proteobacteria	delta/epsilon subdivisions	4.86375	74.4	-	BAZG01	344	4670	4225	3/20/15	4/10/17	Contig	Chiba University	SAMD00017487	GCA_000964525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/525/GCA_000964525.1_ASM96452v1	"2,370,951,125,977,440"	PSR-1
Eubacterium sp. SB2	1658112	PRJEB9583	286755	Terrabacteria group	Firmicutes	5.15619	46	-	CVTZ01	9	4591	4450	6/17/15	4/10/17	Scaffold	URMITE	SAMEA3449147	GCA_001244405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/405/GCA_001244405.1_Eubacterium_massiliense	-	SB2
Alcanivorax sp. DG881	236097	PRJNA19279	19279	Proteobacteria	Gammaproteobacteria	3.80473	58.2	-	ABRW01	4	3429	3340	7/8/08	4/17/17	Scaffold	The Gordon and Betty Moore Foundation Microbial Genome Sequencing Project	SAMN02436178	GCA_000155615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/615/GCA_000155615.1_ASM15561v1	-	DG881
Beggiatoa sp. IS2	1934247	PRJNA340050	340050	Proteobacteria	Gammaproteobacteria	4.41852	42.5	-	MTEL01	699	4051	3824	4/10/17	4/10/17	Scaffold	University of Michigan	SAMN06213970	GCA_002083935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/935/GCA_002083935.1_ASM208393v1	-	-
Morganella morganii subsp. morganii KT	1124991	PRJNA78681	78681	Proteobacteria	Gammaproteobacteria	3.79954	51.1	chromosome:NC_020418.1/CP004345.1	-	1	3632	3489	2/28/13	4/1/17	Complete Genome	Changhua Christian Hospital	SAMN02603113	GCA_000286435.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/435/GCA_000286435.2_ASM28643v2	23282187	-
Escherichia coli str. K-12 substr. MDS42	1110693	PRJDB5	78215	Proteobacteria	Gammaproteobacteria	3.9762	51.1	chromosome:NC_020518.1/AP012306.1	-	1	4017	3780	12/3/11	2/22/17	Complete Genome	Osaka University	SAMD00006056	GCA_000350185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/185/GCA_000350185.1_ASM35018v1	-	K-12 substr. MDS42
Shigella boydii Sb227	300268	PRJNA13146	13146	Proteobacteria	Gammaproteobacteria	4.64652	51.0964	chromosome:NC_007613.1/CP000036.1; plasmid pSB4_227:NC_007608.1/CP000037.1	-	2	5074	4167	11/9/05	8/4/17	Complete Genome	Microbial Genome Center of ChMPH	SAMN02603601	GCA_000012025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/025/GCA_000012025.1_ASM1202v1	16275786	Sb227
Carnobacterium sp. ZWU0011	1339243	PRJNA205596	205596	Terrabacteria group	Firmicutes	2.2362	38.8	-	JTLM01	89	2025	1941	12/8/14	4/9/17	Scaffold	University of Oregon	SAMN03021536	GCA_000798825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/825/GCA_000798825.1_ZWU0011.1	-	ZWU0011
Algoriphagus sp. 32-45-6	1970314	PRJNA379596	379596	FCB group	Bacteroidetes/Chlorobi group	3.71671	45	-	NCDM01	1114	3843	3527	8/16/17	8/16/17	Scaffold	None	SAMN06622372	GCA_002280175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/175/GCA_002280175.1_ASM228017v1	-	-
Limnobacter sp. UBA882	1946764	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	2.96911	51.8	-	DBFK01	344	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457647	GCA_002294265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/265/GCA_002294265.1_ASM229426v1	28894102	-
Pedobacter sp. BAL39	391596	PRJNA19337	19337	FCB group	Bacteroidetes/Chlorobi group	5.78805	44.9	-	ABCM01	47	4904	4760	6/20/07	5/19/17	Contig	Moore Foundation	SAMN02436100	GCA_000170795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/795/GCA_000170795.1_ASM17079v1	-	BAL39
Pseudovibrio sp. POLY-S9	1576596	PRJNA268231	268231	Proteobacteria	Alphaproteobacteria	6.60362	51.3	-	LCWX01	271	6188	5551	11/4/15	4/11/17	Scaffold	Interdisciplinary Centre of Marine and Environmental Research	SAMN03217285	GCA_001431305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/305/GCA_001431305.1_ASM143130v1	26519859	POLY-S9
Pectobacterium atrosepticum	29471	PRJNA252906	252906	Proteobacteria	Gammaproteobacteria	5.02425	51.0735	chromosome:NZ_CP009125.1/CP009125.1; plasmid pPA21A:NZ_CP009126.1/CP009126.1	-	2	4592	4370	8/18/14	4/2/17	Complete Genome	Belarus State University	SAMN02983234	GCA_000740965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/965/GCA_000740965.1_ASM74096v1	"2,523,702,827,257,540"	21A
Candidatus Pelagibacter sp. RS39	1977864	PRJNA378857	378857	Proteobacteria	Alphaproteobacteria	1.20009	29.2	chromosome:NZ_CP020777.1/CP020777.1	-	1	1281	1243	4/20/17	4/22/17	Chromosome	King Abdullah University of Science and Technology (KAUST)	SAMN06562974	GCA_002101315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/315/GCA_002101315.1_ASM210131v1	-	RS39
Lactobacillus fermentum	1613	PRJNA358449	358449	Terrabacteria group	Firmicutes	2.27233	51.0589	chromosome:NZ_CP019030.1/CP019030.1; plasmid pSNU175-2:NZ_CP019031.1/CP019031.1; plasmid pSNU175-3:NZ_CP019032.1/CP019032.1; plasmid pSNU175-4:NZ_CP019033.1/CP019033.1	-	4	2304	2108	1/10/17	4/6/17	Complete Genome	"KoBioLabs, Inc."	SAMN06174220	GCA_001941785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/785/GCA_001941785.1_ASM194178v1	-	SNUV175
Shigella sonnei	624	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	4.94923	51.0282	chromosome:NZ_CP022457.1/CP022457.1; plasmid unnamed1:NZ_CP022458.1/CP022458.1	-	2	5439	4438	7/24/17	8/4/17	Complete Genome	CDC	SAMN06843644	GCA_002224625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/625/GCA_002224625.1_ASM222462v1	-	2015C-3566
Ruminococcus sp. AT10	1720300	PRJEB11878	304241	Terrabacteria group	Firmicutes	3.06989	42.4	-	FAVJ01	5	2927	2800	11/29/15	4/11/17	Scaffold	URMITE	SAMEA3674418	GCA_001487105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/105/GCA_001487105.1_Ruminococcus_phoceensis	-	AT10
Thioalkalivibrio sp. ALJ3	1240557	PRJNA176446	176446	Proteobacteria	Gammaproteobacteria	2.62959	65.3	-	ARHW01	12	2567	2455	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441679	GCA_000377205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/205/GCA_000377205.1_ASM37720v1	-	ALJ3
Bacteroides sp. D1	556258	PRJNA32447	32447	FCB group	Bacteroidetes/Chlorobi group	5.97456	41.9	-	ACAB02	22	4881	4612	1/30/09	5/18/17	Scaffold	Broad Institute	SAMN02463696	GCA_000157095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/095/GCA_000157095.2_Bacteroides_sp_D1_V2	-	D1
Pontibacter akesuensis	388950	PRJNA314846	314846	FCB group	Bacteroidetes/Chlorobi group	4.82956	51.0168	chromosome:NZ_CP014766.1/CP014766.1; plasmid Paks1:NZ_CP014767.1/CP014767.1	-	2	4131	4047	4/6/16	4/12/17	Complete Genome	Hubei provincial center for disease control and prevention	SAMN04544428	GCA_001611675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/675/GCA_001611675.1_ASM161167v1	-	AKS 1T
Thauera sp. 27	305700	PRJNA171225	171225	Proteobacteria	Betaproteobacteria	4.70326	65.8	-	AMXB01	127	4331	4191	11/6/12	6/20/17	Contig	Norwegian University of Life Sciences	SAMN02470722	GCA_000310125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/125/GCA_000310125.2_ASM31012v2	-	27
Shigella sonnei	624	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.98824	51.0021	chromosome:NZ_CP014099.1/CP014099.1; plasmid unnamed1:NZ_CP014096.1/CP014096.1; plasmid unnamed2:NZ_CP014097.1/CP014097.1; plasmid unnamed3:NZ_CP014098.1/CP014098.1; plasmid unnamed4:NZ_CP014100.1/CP014100.1; plasmid unnamed5:NZ_CP014101.1/CP014101.1	-	6	5538	4524	2/11/16	8/8/17	Complete Genome	US Food and Drug Administration 	SAMN03996263	GCA_001558295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/295/GCA_001558295.1_ASM155829v1	-	FDAARGOS_90
Cyanobium sp. CACIAM 14	1496688	PRJNA246088	246088	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.21249	68.6	-	JMRP01	71	3067	2935	6/16/14	6/16/14	Contig	Universidade Federal do Para	SAMN02767986	GCA_000708525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/525/GCA_000708525.1_ASM70852v1	-	-
Glaciecola sp. UBA983	1946573	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.68459	41.6	-	DBBN01	129	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457238	GCA_002292215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/215/GCA_002292215.1_ASM229221v1	28894102	-
Chloroflexus sp. MS-G	1521187	PRJNA236114	236114	Terrabacteria group	Chloroflexi	4.77027	54.3	-	JPIM01	251	3929	3660	7/28/14	4/9/17	Contig	The Pennsylvania State University	SAMN02905655	GCA_000735195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/195/GCA_000735195.1_ASM73519v1	25189583	MS-G
Coprobacillus sp. 3_3_56FAA	665941	PRJNA40019	40019	Terrabacteria group	Firmicutes	3.97177	31.4	-	ACWL01	31	3952	3632	12/22/11	4/17/17	Scaffold	Broad Institute	SAMN02463795	GCA_000239735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/735/GCA_000239735.1_Coprobacillus_sp_3_3_56FAA_V1	-	3_3_56FAA
Shigella sp. FC1544	1892895	PRJNA339975	339975	Proteobacteria	Gammaproteobacteria	4.45846	50.8	-	MECT01	593	5218	3936	9/8/16	8/8/17	Scaffold	Christian Medical College	SAMN05616374	GCA_001722145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/145/GCA_001722145.1_ASM172214v1	-	FC1544
Prochlorococcus sp. RS50	1924285	PRJNA355059	355059	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.65613	31.4	chromosome:NZ_CP018344.1/CP018344.1	-	1	1842	1794	2/7/17	4/17/17	Chromosome	King Abdullah University of Science and Technology (KAUST)	SAMN06061931	GCA_001989415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/415/GCA_001989415.1_ASM198941v1	-	RS50
Fusobacterium sp. HMSC073F01	1739251	PRJNA299901	299901	Fusobacteria	Fusobacteriia	3.50167	29.3	-	LTHT01	221	3216	3037	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477566	GCA_001810475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/475/GCA_001810475.1_ASM181047v1	-	HMSC073F01
Azospirillum sp. RU38E	1907313	PRJEB21410	391662	Proteobacteria	Alphaproteobacteria	6.12876	63.6	-	FZOI01	70	5119	4985	7/13/17	7/21/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05880556	GCA_900188385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/385/GCA_900188385.1_IMG-taxon_2708742412_annotated_assembly	-	RU38E
Desulfovibrio sp. 6_1_46AFAA	665942	PRJNA40021	40021	Proteobacteria	delta/epsilon subdivisions	3.84718	61	-	ACWM01	20	3392	3236	8/29/11	4/17/17	Scaffold	Broad Institute	SAMN02463796	GCA_000224635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/635/GCA_000224635.1_Desulfovibrio_sp_6_1_46AFAA_V1	-	6_1_46AFAA
Escherichia coli	562	PRJEB6403	251923	Proteobacteria	Gammaproteobacteria	4.62597	51	chromosome 1:NZ_LT906474.1/LT906474.1	-	1	4690	4345	8/15/17	8/28/17	Complete Genome	SC	SAMEA4364219	GCA_900186905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/905/GCA_900186905.1_49923_G01	-	NCTC122
Micromonospora sp. CNB394	1169151	PRJNA175170	175170	Terrabacteria group	Actinobacteria	6.3448	72.7	-	ARGW01	85	5793	5402	4/19/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441007	GCA_000374985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/985/GCA_000374985.1_ASM37498v1	-	CNB394
Rhodobacter sp. SW2	371731	PRJNA33855	33855	Proteobacteria	Alphaproteobacteria	3.51434	65.1	-	ACYY01	59	3408	3270	9/22/09	4/17/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN00017479	GCA_000176015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/015/GCA_000176015.1_ASM17601v1	-	SW2
Parabacteroides sp. 2_1_7	457388	PRJNA32437	32437	FCB group	Bacteroidetes/Chlorobi group	5.1663	45.1	-	ABZY02	10	4471	4241	1/30/09	6/12/17	Scaffold	Broad Institute	SAMN02463691	GCA_000157035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/035/GCA_000157035.2_Bacteroides_sp_2_1_7_V2	-	2_1_7
Shigella sonnei	624	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	4.93557	51	chromosome:NZ_CP021144.1/CP021144.1	-	1	5440	4464	5/16/17	8/4/17	Complete Genome	CDC	SAMN06843643	GCA_002142635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/635/GCA_002142635.1_ASM214263v1	-	2015AM-1099
Dermacoccus sp. Ellin185	188626	PRJNA34079	34079	Terrabacteria group	Actinobacteria	3.11536	69	-	AEIQ01	131	2893	2691	10/13/10	4/17/17	Scaffold	J. Craig Venter Institute	SAMN00115033	GCA_000152185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/185/GCA_000152185.2_ASM15218v1	-	Ellin185
Acidaminococcus sp. BV3L6	1111120	PRJNA89623	89623	Terrabacteria group	Firmicutes	2.17126	49.6	-	AWUR01	55	2029	1894	9/19/13	4/9/17	Contig	JCVI	SAMN00829141	GCA_000468835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/835/GCA_000468835.1_AspBV3L6v1.0	-	BV3L6
Dorea sp. AGR2135	1280669	PRJNA185686	185686	Terrabacteria group	Firmicutes	3.5095	40.6	-	ATVU01	73	3559	3257	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441590	GCA_000420885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/885/GCA_000420885.1_ASM42088v1	-	AGR2135
Ralstonia sp. GA3-3	1229514	PRJNA174276	174276	Proteobacteria	Betaproteobacteria	6.76618	66.7	-	AQPZ01	47	6280	6004	5/7/13	4/8/17	Scaffold	CSIRO	SAMN02469696	GCA_000389805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/805/GCA_000389805.1_GA3-3_1.0	23833131	GA3-3
Propionibacterium sp. oral taxon 192 str. F0372	1203605	PRJNA170349	170349	Terrabacteria group	Actinobacteria	2.71106	61.3	-	ATFL01	2	2520	2419	6/21/13	4/17/17	Scaffold	Broad Institute	SAMN02596989	GCA_000413315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/315/GCA_000413315.1_Prop_sp_oral_taxon_192_F0372_V1	-	F0372
Olsenella sp. oral taxon 809 str. F0356	661087	PRJNA39743	39743	Terrabacteria group	Actinobacteria	2.16386	66.4	-	ACVE01	3	1934	1829	10/31/11	4/17/17	Scaffold	Broad Institute	SAMN02463784	GCA_000233535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/535/GCA_000233535.1_Olsenella_sp_F0356_V1	-	F0356
Alistipes sp. Marseille-P2431	1816676	PRJEB13794	320151	FCB group	Bacteroidetes/Chlorobi group	3.8052	58.3	-	FKYL01	5	2971	2837	5/4/16	4/12/17	Scaffold	URMITE	SAMEA3949864	GCA_900083545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/545/GCA_900083545.1_PRJEB13794	-	Marseille-P2431
Lactobacillus fermentum	1613	PRJNA382300	382300	Terrabacteria group	Firmicutes	2.23992	51	chromosome:NZ_CP021104.1/CP021104.1	-	1	2270	2040	5/9/17	5/22/17	Complete Genome	Universiti Sains Malaysia	SAMN06703219	GCA_002119645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/645/GCA_002119645.1_ASM211964v1	-	FTDC 8312
Escherichia coli C	498388	PRJNA380607	380607	Proteobacteria	Gammaproteobacteria	4.61702	51	chromosome:NZ_CP020543.1/CP020543.1	-	1	4703	4372	4/5/17	4/8/17	Complete Genome	Drexel University College of Medicine	SAMN06645125	GCA_002079225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/225/GCA_002079225.1_ASM207922v1	-	C
Porphyromonas sp. HMSC065F10	1739394	PRJNA300044	300044	FCB group	Bacteroidetes/Chlorobi group	2.12316	55.5	-	LTXH01	103	1725	1619	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480057	GCA_001808555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/555/GCA_001808555.1_ASM180855v1	-	HMSC065F10
Anaerostipes sp. 494a	1261636	PRJNA341691	341691	Terrabacteria group	Firmicutes	2.44798	36.7	-	MJIF01	2	2438	2282	1/9/17	4/16/17	Contig	USDA-ARS	SAMN05726913	GCA_001940315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/315/GCA_001940315.1_ASM194031v1	27613689	494a
Eggerthella sp. HGA1	910311	PRJNA59527	59527	Terrabacteria group	Actinobacteria	3.36293	64	-	AEXR01	42	2900	2805	3/7/11	4/17/17	Contig	J. Craig Venter Institute	SAMN00116781	GCA_000191845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/845/GCA_000191845.2_ASM19184v1	-	HGA1
Tannerella sp. CAG:118	1262978	PRJEB696	206678	FCB group	Bacteroidetes/Chlorobi group	3.79749	37.7	-	CAYC01	94	2964	2920	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138681	GCA_000435895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/895/GCA_000435895.1_MGS118	-	-
Labrenzia sp. DG1229	681847	PRJNA40879	40879	Proteobacteria	Alphaproteobacteria	7.6297	56.2	-	AYYG01	61	7244	6772	1/17/14	4/17/17	Scaffold	Scottish Association for Marine Science	SAMN02589594	GCA_000521215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/215/GCA_000521215.1_DG1229v1	-	DG1229
Escherichia coli	562	PRJNA312438	312438	Proteobacteria	Gammaproteobacteria	4.16559	51	chromosome:NZ_CP014641.1/CP014641.1	-	1	4226	3930	4/4/17	4/5/17	Complete Genome	Seqomics Ltd.	SAMN04497926	GCA_002078275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/275/GCA_002078275.1_ASM207827v1	-	BLK9
Peptoniphilus sp. DNF00840	1477000	PRJNA246508	246508	Terrabacteria group	Firmicutes	1.77793	34.3	-	LSDH01	72	1671	1595	2/8/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN04324901	GCA_001553125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/125/GCA_001553125.1_ASM155312v1	-	DNF00840
Veillonella sp. HPA0037	1203593	PRJNA169494	169494	Terrabacteria group	Firmicutes	2.07161	39	-	ATCG01	3	1904	1813	6/13/13	4/17/17	Scaffold	Broad Institute	SAMN02596981	GCA_000411535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/535/GCA_000411535.1_Veil_sp_HPA0037_V1	-	HPA0037
Escherichia coli	562	PRJNA312746	312746	Proteobacteria	Gammaproteobacteria	4.16578	51	chromosome:NZ_CP014642.1/CP014642.1	-	1	4229	3925	4/4/17	4/5/17	Complete Genome	Seqomics Ltd.	SAMN04505873	GCA_002078295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/295/GCA_002078295.1_ASM207829v1	-	BLK16
Coprococcus sp. ART55/1	751585	PRJNA45915	45915	Terrabacteria group	Firmicutes	3.12301	44.6	chromosome:FP929039.1	-	1	2162	2128	3/25/10	2/27/15	Chromosome	metaHIT	SAMEA3138371	GCA_000210595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/595/GCA_000210595.1_ASM21059v1	-	ART55/1
Delftia sp. ZNC0008	1339242	PRJNA205595	205595	Proteobacteria	Betaproteobacteria	6.32592	66.5	-	JTKZ01	975	6103	5271	12/8/14	4/10/17	Scaffold	University of Oregon	SAMN03021516	GCA_000799035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/035/GCA_000799035.1_ZNC0008.1	-	ZNC0008
Collinsella sp. An7	1965651	PRJNA377666	377666	Terrabacteria group	Actinobacteria	2.36736	65.3	-	NFHP01	18	2008	1906	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473748	GCA_002159335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/335/GCA_002159335.1_ASM215933v1	-	An7
Thalassospira sp. MCCC 1A02491	1769751	PRJNA305769	305769	Proteobacteria	Alphaproteobacteria	3.3883	54.9	-	LPVX01	33	3123	3048	4/7/16	4/12/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN04332630	GCA_001613785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/785/GCA_001613785.1_ASM161378v1	-	MCCC 1A02491
Subdoligranulum sp. 60_17	1897022	PRJNA321218	321218	Terrabacteria group	Firmicutes	2.09185	60.4	-	MNTR01	31	1892	1786	12/23/16	12/23/16	Scaffold	None	SAMN05717301	GCA_001917095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/095/GCA_001917095.1_ASM191709v1	27819664	-
Arthrospira sp. PCC 8005	376219	PRJNA40633	40633	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.16636	44.6	-	CAFN01	692	5916	5168	1/19/12	5/18/17	Scaffold	"SCK-CEN, Belgian Nuclear Research Center/Genoscope"	SAMEA3138303	GCA_000176895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/895/GCA_000176895.2_ASM17689v2	-	PCC 8005
Paenibacillus yonginensis	1462996	PRJNA306396	306396	Terrabacteria group	Firmicutes	4.9859	51	chromosome:NZ_CP014167.1/CP014167.1	-	1	4550	4272	7/15/16	6/13/17	Complete Genome	Kyung Hee University	SAMN04419545	GCA_001685395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/395/GCA_001685395.1_ASM168539v1	-	DCY84
Loktanella sp. 5RATIMAR09	1225655	PRJNA292750	292750	Proteobacteria	Alphaproteobacteria	3.69926	57.8	-	LJAL01	43	3692	3582	10/29/15	4/16/17	Contig	Univesitat de les Illes Balears (UIB)	SAMN03988207	GCA_001419985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/985/GCA_001419985.1_ASM141998v1	-	5RATIMAR09
Morganella morganii	582	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	3.90804	51	chromosome:NZ_CP014026.1/CP014026.1	-	1	3786	3594	2/11/16	4/4/17	Complete Genome	US Food and Drug Administration 	SAMN03996316	GCA_001558895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/895/GCA_001558895.1_ASM155889v1	-	FDAARGOS_172
Afipia sp. OHSU_II-uncloned	1293051	PRJNA189271	189271	Proteobacteria	Alphaproteobacteria	5.08129	61.1	-	APHQ01	48	4918	4769	11/20/13	4/9/17	Contig	"CBER, FDA"	SAMN02951922	GCA_000497555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/555/GCA_000497555.1_OHSU_uncloned	-	OHSU_II-uncloned
Paenibacillus durus ATCC 35681	1333534	PRJNA277386	277386	Terrabacteria group	Firmicutes	5.57548	51	chromosome:NZ_CP011114.1/CP011114.1	-	1	5308	5029	5/7/15	4/10/17	Complete Genome	Universiti Sains Malaysia	SAMN03389917	GCA_000993825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/825/GCA_000993825.1_ASM99382v1	26893411	ATCC 35681
Haemophilus sp. HMSC066D02	1739254	PRJNA299904	299904	Proteobacteria	Gammaproteobacteria	1.97602	39.4	-	LWQP01	30	1956	1864	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477568	GCA_001810545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/545/GCA_001810545.1_ASM181054v1	-	HMSC066D02
Paenibacillus riograndensis SBR5	1073571	PRJEB8797	280881	Terrabacteria group	Firmicutes	7.91958	51	chromosome I:NZ_LN831776.1/LN831776.1	-	1	6793	6506	4/10/15	4/10/17	Complete Genome	CEBITEC	SAMEA3303989	GCA_000981585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/585/GCA_000981585.1_SBR5_T_	-	-
Aerococcus sp. HMSC06H08	1581129	PRJNA269898	269898	Terrabacteria group	Firmicutes	2.17921	47	-	LWNZ01	52	1990	1902	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03434236	GCA_001807425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/425/GCA_001807425.1_ASM180742v1	-	HMSC06H08
Escherichia coli	562	PRJNA238952	238952	Proteobacteria	Gammaproteobacteria	4.80798	51	chromosome:NZ_CP007390.1/CP007390.1	-	1	5005	4557	3/19/14	2/23/17	Complete Genome	University of Antwerpen	SAMN02666434	GCA_000599625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/625/GCA_000599625.1_ASM59962v1	24723707	ST540
Thiomonas sp. FB-Cd	1158292	PRJNA239509	239509	Proteobacteria	Betaproteobacteria	4.38846	62.5	-	JPOE01	6	4061	3801	7/24/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02787089	GCA_000733775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/775/GCA_000733775.1_ASM73377v1	-	FB-Cd
Rhodanobacter sp. OR87	1076523	PRJNA76951	76951	Proteobacteria	Gammaproteobacteria	4.09639	67.4	-	AXBJ01	48	3756	3579	9/30/13	4/9/17	Scaffold	JGI	SAMN02441119	GCA_000473345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/345/GCA_000473345.1_ASM47334v1	-	OR87
Rothia sp. HMSC078H08	1715008	PRJNA296135	296135	Terrabacteria group	Actinobacteria	2.31238	59.6	-	LTKQ01	23	1803	1726	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04456733	GCA_001808955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/955/GCA_001808955.1_ASM180895v1	-	HMSC078H08
Escherichia coli	562	PRJNA238952	238952	Proteobacteria	Gammaproteobacteria	4.87568	51	chromosome:NZ_CP007391.1/CP007391.1	-	1	5096	4582	3/19/14	2/23/17	Complete Genome	University of Antwerpen	SAMN02666695	GCA_000599645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/645/GCA_000599645.1_ASM59964v1	24723707	ST540
Methanobacterium sp. A39	1860100	PRJNA324744	324744	Euryarchaeota	Methanobacteria	3.32952	33.2	-	LZPM01	70	3191	3082	9/16/16	4/13/17	Contig	"Australian Centre for Ecogenomics, The University of Queensland"	SAMN05224566	GCA_001729285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/285/GCA_001729285.1_ASM172928v1	-	A39
Tepidanaerobacter sp. DTU063	1671632	PRJNA283298	283298	Terrabacteria group	Firmicutes	2.34502	42.5	-	LFSJ01	231	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03778995	GCA_001512695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/695/GCA_001512695.1_ASM151269v1	26839589	-
Methylocystis sp. LW5	107633	PRJNA195700	195700	Proteobacteria	Alphaproteobacteria	4.76098	64.8	-	JMKQ01	6	4432	4198	5/8/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02743345	GCA_000685825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/825/GCA_000685825.1_ASM68582v1	-	LW5
Turicibacter sp. UBA1159	1947763	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.96785	36.4	-	DBZN01	208	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06454952	GCA_002311155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/155/GCA_002311155.1_ASM231115v1	28894102	-
Desulfosporosinus sp. I2	1617025	PRJNA275692	275692	Terrabacteria group	Firmicutes	5.31173	42.4	-	JYNH01	350	5300	4692	3/23/15	4/10/17	Contig	Centre Bioengineering RAS	SAMN03352178	GCA_000960765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/765/GCA_000960765.1_ASM96076v1	-	I2
Citromicrobium sp. JL1351	1629596	PRJNA277903	277903	Proteobacteria	Alphaproteobacteria	3.16396	65.1	-	LAPR01	17	3104	3026	10/2/15	4/11/17	Contig	Xiamen University	SAMN03398462	GCA_001306275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/275/GCA_001306275.1_ASM130627v1	-	JL1351
Megasphaera sp. UPII 135-E	1000569	PRJNA64691	64691	Terrabacteria group	Firmicutes	1.65055	38.9	-	AFUG01	49	1537	1403	7/25/11	4/17/17	Contig	J. Craig Venter Institute	SAMN00255226	GCA_000221545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/545/GCA_000221545.2_ASM22154v1	-	UPII 135-E
Syntrophothermus lipocalidus DSM 12680	643648	PRJNA37873	37873	Terrabacteria group	Firmicutes	2.40556	51	chromosome:NC_014220.1/CP002048.1	-	1	2394	2314	5/28/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598518	GCA_000092405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/405/GCA_000092405.1_ASM9240v1	21304731	DSM 12680
Lacinutrix sp. MedPE-SW	1860087	PRJNA318731	318731	FCB group	Bacteroidetes/Chlorobi group	3.03594	30.6	-	MPCX01	22	2782	2741	11/10/16	11/10/16	Contig	University Miguel Hernandez	SAMN05219213	GCA_001874145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/145/GCA_001874145.1_ASM187414v1	27446036	-
Rheinheimera sp. EpRS3	1712383	PRJNA299357	299357	Proteobacteria	Gammaproteobacteria	4.39621	49.3	-	LNQS01	14	3990	3886	1/13/16	4/11/17	Contig	University of Florence	SAMN04038493	GCA_001513785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/785/GCA_001513785.1_ASM151378v1	-	EpRS3
Nitrosopumilus sp. Nsub	1776294	PRJNA308059	308059	TACK group	Thaumarchaeota	1.38362	31.4	-	LQMW01	26	1685	1604	1/27/16	4/11/17	Contig	Hong Kong University of Science and Technology	SAMN04386402	GCA_001541925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/925/GCA_001541925.1_ASM154192v1	-	Nsub
Nitrospina sp. AB-629-B18	1131269	PRJNA165597	165597	Nitrospinae/Tectomicrobia group	Nitrospinae	2.54386	39.6	-	AQVV01	219	-	-	4/20/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02256471	GCA_000375765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/765/GCA_000375765.1_ASM37576v1	-	AB-629-B18
Pectobacterium atrosepticum SCRI1043	218491	PRJNA350	350	Proteobacteria	Gammaproteobacteria	5.06402	51	chromosome:NC_004547.2/BX950851.1	-	1	4615	4381	3/5/03	5/28/17	Complete Genome	Sanger Institute	SAMEA1705920	GCA_000011605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/605/GCA_000011605.1_ASM1160v1	-	SCRI1043
Morganella morganii	582	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.07573	50.9997	chromosome:CP023505.1; plasmid unnamed:CP023506.1	-	2	3922	3732	9/28/17	9/28/17	Complete Genome	US Food and Drug Administration 	SAMN07312409	GCA_002386305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/305/GCA_002386305.1_ASM238630v1	-	FDAARGOS_365
Idiomarina sp. MD25a	1889913	PRJNA293564	293564	Proteobacteria	Gammaproteobacteria	2.68025	47.5	-	MDGT01	7	2551	2469	11/7/16	4/13/17	Contig	UPR- Mayaguez	SAMN05567310	GCA_001870515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/515/GCA_001870515.1_ASM187051v1	-	MD25a
Hyphomicrobium sp. 802	1112272	PRJNA84365	84365	Proteobacteria	Alphaproteobacteria	4.33358	59.5	-	JAFM01	1	4182	4098	1/14/14	4/9/17	Contig	JGI	SAMN02584912	GCA_000526135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/135/GCA_000526135.1_ASM52613v1	-	802
Oceanicola sp. MCTG156(1a)	1415756	PRJNA225853	225853	Proteobacteria	Alphaproteobacteria	3.88112	62.7	-	JQMY01	5	3875	3723	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02744758	GCA_000744955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/955/GCA_000744955.1_ASM74495v1	-	MCTG156(1a)
Leuconostoc sp. DORA_2	1403934	PRJNA221490	221490	Terrabacteria group	Firmicutes	0.544607	37.5	-	AZMB01	414	844	844	12/16/13	12/16/13	Scaffold	"University of California, Berkeley"	SAMN02316559	GCA_000508505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/505/GCA_000508505.1_LS_DORA_2_velvet_1.1	-	-
Acidiphilium sp. CAG:727	1262689	PRJEB991	206757	Proteobacteria	Alphaproteobacteria	1.73468	45.4	-	CBIM01	116	1509	1479	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138760	GCA_000437515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/515/GCA_000437515.1_MGS727	-	-
Nesterenkonia sp. PF2B19	1881858	PRJNA330914	330914	Terrabacteria group	Actinobacteria	3.69692	69.5	-	MDSS02	134	3443	2796	10/12/16	4/27/17	Contig	Agharkar Research Institute	SAMN05430127	GCA_001758425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/425/GCA_001758425.2_ASM175842v2	28408669	PF2B19
Chromobacterium sp. F49	1777131	PRJNA308367	308367	Proteobacteria	Betaproteobacteria	4.69697	64.8	-	LQNP01	87	4412	4255	4/13/16	4/12/17	Contig	University of Malaya	SAMN04387808	GCA_001619865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/865/GCA_001619865.1_ASM161986v1	-	F49
Aeromicrobium sp. Root344	1736521	PRJNA297942	297942	Terrabacteria group	Actinobacteria	3.87425	68.8	-	LMDH01	1	3861	3770	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155790	GCA_001425755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/755/GCA_001425755.1_Root344	26633631	Root344
Anaerococcus sp. HMSC075B03	1739537	PRJNA300188	300188	Terrabacteria group	Firmicutes	1.88118	29	-	LTSR01	57	1799	1694	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480451	GCA_001815585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/585/GCA_001815585.1_ASM181558v1	-	HMSC075B03
Oceanobacillus sp. JCM 19060	1481930	PRJDB1712	252075	Terrabacteria group	Firmicutes	4.89924	37.5	-	BAXT01	87	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000391	GCA_001310675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/675/GCA_001310675.1_ASM131067v1	-	JCM 19060
Xanthomonas sp. SHU308	1248412	PRJNA178517	178517	Proteobacteria	Gammaproteobacteria	4.85538	68.9	-	AQOK01	915	4381	3790	4/15/13	6/15/17	Contig	Colorado State University	SAMN02469648	GCA_000364645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/645/GCA_000364645.1_SHU308	-	SHU308
Paenisporosarcina sp. TG-14	1231057	PRJNA174754	174754	Terrabacteria group	Firmicutes	3.82595	36.9	-	AMGD01	134	3646	3535	9/17/12	4/8/17	Contig	Korea Polar Research Institute	SAMN02470166	GCA_000297555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/555/GCA_000297555.1_ASM29755v1	23144403	TG-14
Aciduliprofundum sp. JdFR-45	1935018	PRJNA269163	269163	Euryarchaeota	unclassified Euryarchaeota	1.24976	57.6	-	MTNG01	161	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226362	GCA_002011395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/395/GCA_002011395.1_ASM201139v1	28350381	-
Mitsuaria sp. PDC51	1881035	PRJEB17294	351456	Proteobacteria	Betaproteobacteria	5.85211	70	-	FOZE01	6	4990	4874	11/1/16	8/3/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428960	GCA_900113225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/225/GCA_900113225.1_IMG-taxon_2690315655_annotated_assembly	-	PDC51
Pyrobaculum sp. JCHS_4	1714260	PRJNA295311	295311	TACK group	Crenarchaeota	1.02443	57.8	-	LOBX01	145	1228	842	1/15/16	1/15/16	Scaffold	Montana State University	SAMN04045697	GCA_001515835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/835/GCA_001515835.1_ASM151583v1	-	-
Shigella boydii CDC 3083-94	344609	PRJNA15637	15637	Proteobacteria	Gammaproteobacteria	4.87466	50.9975	chromosome:NC_010658.1/CP001063.1; plasmid pBS512_2:NC_010656.1/CP001058.1; plasmid pBS512_211:NC_010660.1/CP001062.1; plasmid pBS512_33:NC_010657.1/CP001059.1; plasmid pBS512_5:NC_010659.1/CP001060.1; plasmid pBS512_7:NC_010672.1/CP001061.1	-	6	5505	4380	5/5/08	8/4/17	Complete Genome	TIGR	SAMN02604039	GCA_000020185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/185/GCA_000020185.1_ASM2018v1	-	BS512; CDC 3083-94
Escherichia coli	562	PRJNA391287	391287	Proteobacteria	Gammaproteobacteria	5.46632	50.9935	chromosome:NZ_CP022154.1/CP022154.1; plasmid pABWA45_1:NZ_CP022155.1/CP022155.1; plasmid pABWA45_2:NZ_CP022156.1/CP022156.1; plasmid pABWA45_3:NZ_CP022157.1/CP022157.1; plasmid pABWA45_4:NZ_CP022158.1/CP022158.1; plasmid pABWA45_5:NZ_CP022159.1/CP022159.1	-	6	5818	5292	6/30/17	7/3/17	Complete Genome	University of Zurich	SAMN07260764	GCA_002211725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/725/GCA_002211725.1_ASM221172v1	-	ABWA45
Sulfurimonas sp. RIFCSPLOWO2_02_FULL_36_28	1802252	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.69868	36	-	MIBY01	146	1793	1636	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316114	GCA_001829655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/655/GCA_001829655.1_ASM182965v1	27774985	-
Atopobium sp. HMSC064B08	1739402	PRJNA300052	300052	Terrabacteria group	Actinobacteria	1.59214	49.1	-	LTXB01	18	1476	1405	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480062	GCA_001813205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/205/GCA_001813205.1_ASM181320v1	-	HMSC064B08
Spirochaeta sp. LUC14_002_19_P3	1940821	PRJNA368737	368737	Spirochaetes	Spirochaetia	1.94597	50	-	MUIB01	177	1759	1687	4/10/17	4/10/17	Contig	Clemson University	SAMN06271652	GCA_002084135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/135/GCA_002084135.1_ASM208413v1	-	-
Dehalobacter sp. E1	304767	PRJEB386	177096	Terrabacteria group	Firmicutes	2.95026	43.8	-	CANE01	102	2866	2719	9/19/12	4/17/17	Contig	WUR	SAMEA2272490	GCA_000309295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/295/GCA_000309295.1_ASM30929v1	-	E1
Akkermansia sp. KLE1605	1131336	PRJNA80821	80821	PVC group	Verrucomicrobia	3.10822	56.9	-	AMCH01	54	2614	2511	4/6/16	4/12/17	Scaffold	Washington University Genome Center	SAMN04606485	GCA_001647615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/615/GCA_001647615.1_ASM164761v1	-	KLE1605
Cellvibrio sp. BR	1134474	PRJNA81229	81229	Proteobacteria	Gammaproteobacteria	4.85068	48.8	-	AICM01	23	4183	4084	5/18/12	5/18/17	Scaffold	Animal Science  and Technology of southwest University 	SAMN02471006	GCA_000263355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/355/GCA_000263355.1_ASM26335v1	-	BR
Shigella sonnei	624	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	4.90657	50.9785	chromosome:NZ_CP022455.1/CP022455.1; plasmid unnamed1:NZ_CP022456.1/CP022456.1	-	2	5395	4370	7/24/17	8/4/17	Complete Genome	CDC	SAMN06843645	GCA_002224605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/605/GCA_002224605.1_ASM222460v1	-	2015C-3794
Cellulomonas sp. Leaf395	1736362	PRJNA297956	297956	Terrabacteria group	Actinobacteria	4.16665	71.8	-	LMQI01	7	3881	3770	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151752	GCA_001424125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/125/GCA_001424125.1_Leaf395	26633631	Leaf395
Brevibacterium sp. HMSC08F02	1581140	PRJNA269909	269909	Terrabacteria group	Actinobacteria	2.26556	62.4	-	LWNS01	35	2045	1959	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03434385	GCA_001807555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/555/GCA_001807555.1_ASM180755v1	-	HMSC08F02
Phyllobacterium sp. YR620	1881066	PRJEB16296	348890	Proteobacteria	Alphaproteobacteria	4.59175	59	-	FNJP01	12	4425	4328	10/20/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428967	GCA_900104165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/165/GCA_900104165.1_IMG-taxon_2690315616_annotated_assembly	-	YR620
Oceanicaulis sp. HLUCCA04	1666904	PRJNA283228	283228	Proteobacteria	Alphaproteobacteria	2.75855	62.8	-	LJSH01	9	2678	2627	10/14/15	6/23/16	Scaffold	Pacific Northwest National Laboratroy	SAMN03785494	GCA_001314625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/625/GCA_001314625.1_ASM131462v1	26497460	-
Hydrogenophaga sp. Root209	1736490	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	5.30774	65.1	-	LMIE01	34	5068	4905	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155759	GCA_001428625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/625/GCA_001428625.1_Root209	26633631	Root209
Cycloclasticus sp. DSM 27168	1884353	PRJEB18315	355771	Proteobacteria	Gammaproteobacteria	2.54045	41.6	-	FQZJ01	18	2444	2356	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05519226	GCA_900142045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/045/GCA_900142045.1_IMG-taxon_2695421048_annotated_assembly	-	DSM 27168
Mesorhizobium sp. URHA0056	1298858	PRJNA190815	190815	Proteobacteria	Alphaproteobacteria	6.30695	62.8	-	AUEL01	36	6241	5981	7/10/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441183	GCA_000425965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/965/GCA_000425965.1_ASM42596v1	-	URHA0056
Bordetella sp. FB-8	1159870	PRJNA187096	187096	Proteobacteria	Betaproteobacteria	4.07972	63.4	-	ARNH01	2	3839	3693	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440498	GCA_000382185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/185/GCA_000382185.1_ASM38218v1	-	FB-8
Xanthobacter sp. 17-67-6	1971593	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	0.904488	66.4	-	NCHX01	434	1124	1054	8/16/17	8/16/17	Scaffold	None	SAMN06622257	GCA_002257305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/305/GCA_002257305.1_ASM225730v1	-	-
Rickettsia sp. Tenjiku01	1736693	PRJDB4357	313288	Proteobacteria	Alphaproteobacteria	1.25621	32.5	-	BCMR01	32	1510	1149	2/25/16	4/12/17	Contig	"Laboratory of Bacterial Genomics, Pathogen Genomics Center, National Institute of Infectious Diseases"	SAMD00043251	GCA_001653015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/015/GCA_001653015.1_ASM165301v1	27192498	Tenjiku01
Micavibrio sp. UBA851	1946940	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.95315	57.8	-	DBGP01	364	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455553	GCA_002295485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/485/GCA_002295485.1_ASM229548v1	28894102	-
Enterovibrio norvegicus FF-33	1190603	PRJNA164633	164633	Proteobacteria	Gammaproteobacteria	5.1818	47.4	-	AJYD02	56	4579	4418	8/13/12	4/13/17	Scaffold	MIT	SAMN02470474	GCA_000286835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/835/GCA_000286835.2_ASM28683v2	22955834	FF-33
Thiomicrospira sp. MA2-6	1449087	PRJNA234785	234785	Proteobacteria	Gammaproteobacteria	2.67672	50.1	-	JOMK01	1	2538	2455	6/24/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02745443	GCA_000711305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/305/GCA_000711305.1_ASM71130v1	-	MA2-6
Rhodovulum sp. PH10	1187851	PRJNA165169	165169	Proteobacteria	Alphaproteobacteria	4.83143	69.3	-	AKZI01	273	4358	4174	8/28/12	5/19/17	Contig	Institute of Microbial Technology	SAMN02469994	GCA_000293785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/785/GCA_000293785.1_ASM29378v1	23105089	PH10
Verrucomicrobium sp. BvORR106	1403819	PRJDB1469	254385	PVC group	Verrucomicrobia	8.69393	60.8	-	BATR01	209	6985	6695	7/3/14	4/9/17	Contig	"Hokkaido Agricultural Research Center, National Agriculture and Food Research Organization."	SAMD00036768	GCA_000739655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/655/GCA_000739655.1_ASM73965v1	-	-
Variovorax sp. URHB0020	1380385	PRJNA213773	213773	Proteobacteria	Betaproteobacteria	6.63234	64.6	-	JHVQ01	41	6321	6050	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02952996	GCA_000620225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/225/GCA_000620225.1_ASM62022v1	-	URHB0020
Gallionella sp. UBA4121	1946562	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	2.95968	54	-	DFWZ01	63	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453219	GCA_002381565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/565/GCA_002381565.1_ASM238156v1	28894102	-
Haemophilus parahaemolyticus	735	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.03901	40.1	-	MUXY01	26	2008	1883	3/3/17	3/6/17	Scaffold	TAILORED-Treatment project	SAMN06308710	GCA_002015035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/035/GCA_002015035.1_ASM201503v1	-	CCUG 3716
Mycoplasma arginini 7264	1188236	PRJNA164753	164753	Terrabacteria group	Tenericutes	0.61562	26.2	-	AORG01	18	562	518	4/19/13	4/8/17	Contig	EVOLMYCO	SAMN02471341	GCA_000367785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/785/GCA_000367785.1_version_1.0	23766408	7264
Gluconobacter frateurii NBRC 103465	1307834	PRJDB1009	231355	Proteobacteria	Alphaproteobacteria	3.39609	55.6	-	BARL01	2	3268	3199	6/6/13	11/8/16	Scaffold	National Institute of Advanced Industrial Science and Technology (AIST)	SAMD00036732	GCA_000509445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/509/445/GCA_000509445.1_ASM50944v1	23887908	-
Capnocytophaga cynodegmi	28189	PRJEB8050	270929	FCB group	Bacteroidetes/Chlorobi group	2.677	34.4	-	CDOD01	67	2393	2288	1/20/15	4/10/17	Contig	"BIOZENTRUM, UNIVERSITY OF BASEL"	SAMEA3180123	GCA_000827615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/827/615/GCA_000827615.1_Ccyn2B.1	-	Ccyn2B
Enterovibrio calviensis 1F-211	1190606	PRJNA164639	164639	Proteobacteria	Gammaproteobacteria	5.6291	47.7	-	AJYG02	118	4942	4745	8/13/12	4/13/17	Scaffold	MIT	SAMN02470452	GCA_000286895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/895/GCA_000286895.2_ASM28689v2	22955834	1F-211
Vibrio breoganii ZF-55	1188253	PRJNA164807	164807	Proteobacteria	Gammaproteobacteria	4.04963	45.2	-	AJYL02	176	3632	3504	8/13/12	4/13/17	Scaffold	MIT	SAMN02470465	GCA_000286975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/975/GCA_000286975.2_ASM28697v2	22955834	ZF-55
Methanosaeta concilii GP6	990316	PRJNA63185	63185	Euryarchaeota	Methanomicrobia	3.02664	50.9577	chromosome:NC_015416.1/CP002565.1; plasmid pGP6:NC_015430.1/CP002566.1	-	2	3030	2899	4/15/11	4/17/17	Complete Genome	University of Wisconsin-Parkside	SAMN02604263	GCA_000204415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/415/GCA_000204415.1_ASM20441v1	21571998	GP6
Vibrio crassostreae	246167	PRJEB5879	284686	Proteobacteria	Gammaproteobacteria	5.6455	44.2	-	CCKD01	92	5055	4843	5/20/15	4/3/17	Contig	STATION BIOLOGIQUE DE ROSCOFF	SAMEA2591293	GCA_001048475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/475/GCA_001048475.1_VRSK37_PRJEB5879	-	J5-15
Vibrio genomosp. F10 str. 9ZC157	1187847	PRJNA164825	164825	Proteobacteria	Gammaproteobacteria	4.12295	43.6	-	AJYP02	285	3751	3556	8/13/12	4/13/17	Scaffold	MIT	SAMN02470486	GCA_000287035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/035/GCA_000287035.2_ASM28703v2	22955834	9ZC157
Nitratireductor aquibiodomus	204799	PRJNA327597	327597	Proteobacteria	Alphaproteobacteria	4.49016	61.5	-	MAYB01	47	4290	4196	7/29/16	7/11/17	Contig	National University of Colombia	SAMN05348542	GCA_001696575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/575/GCA_001696575.1_ASM169657v1	-	EBB 35.1
Vibrio tasmaniensis	212663	PRJNA322703	322703	Proteobacteria	Gammaproteobacteria	5.5508	44	-	LZFS01	38	4927	4731	6/23/16	4/5/17	Contig	UC Davis	SAMN05172612	GCA_001675865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/865/GCA_001675865.1_ASM167586v1	-	UCD-FRSSP16_25
Aliivibrio logei	688	PRJNA318805	318805	Proteobacteria	Gammaproteobacteria	4.638	39	-	MAJU01	76	4170	4044	7/21/16	4/13/17	Scaffold	Massachusetts Institute of Technology	SAMN04867931	GCA_001691055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/055/GCA_001691055.1_ASM169105v1	-	1S159
Acinetobacter venetianus	52133	PRJNA312388	312388	Proteobacteria	Gammaproteobacteria	3.475	39	-	LSVC01	87	3317	3165	2/26/16	4/5/17	Scaffold	University of Houston	SAMN04497621	GCA_001577485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/485/GCA_001577485.1_ASM157748v1	-	JKSF02
Flammeovirga sp. SJP92	1775430	PRJNA306821	306821	FCB group	Bacteroidetes/Chlorobi group	8.49164	34.8	-	LQAQ01	123	6496	6305	3/8/16	4/12/17	Contig	Third Institute of Oceanography	SAMN04364338	GCA_001583495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/495/GCA_001583495.1_ASM158349v1	-	SJP92
Leptospira sp. P2653	1218600	PRJNA177133	177133	Spirochaetes	Spirochaetia	4.17507	40.9	-	ANMY01	178	4159	3808	3/15/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01801598	GCA_000346955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/955/GCA_000346955.1_gls454051v01	-	P2653
Mycobacterium vaccae NBRC 14118 = CIP 105934	1223499	PRJDB425	173144	Terrabacteria group	Actinobacteria	6.16882	68.6	-	BCRS01	370	6045	5605	2/6/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046508	GCA_001552715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/715/GCA_001552715.1_ASM155271v1	-	NBRC 14118
Pseudomonas alcaliphila	101564	PRJNA292972	292972	Proteobacteria	Gammaproteobacteria	5.23954	62.6	-	LLXP01	19	4873	4752	6/1/16	4/12/17	Contig	IBR-CONICET	SAMN04196538	GCA_001653895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/895/GCA_001653895.1_ASM165389v1	27270463	ED1
Xanthomonas translucens pv. cerealis	152263	PRJNA268946	268946	Proteobacteria	Gammaproteobacteria	4.51814	67.3404	chromosome:NZ_CM003052.1/CM003052.1; plasmid Xtc-CFBP2541-G1-Mol002:NZ_CM003053.1/CM003053.1	JWHD01	10	3905	3569	12/22/14	4/2/17	Chromosome	FNX	SAMN03246830	GCA_000807145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/145/GCA_000807145.1_Xtc-CFBP2541-G1	25676771	CFBP 2541
Snodgrassella alvi	1196083	PRJNA339423	339423	Proteobacteria	Betaproteobacteria	2.42519	41.2	-	NAHC01	84	2187	2085	4/13/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603558	GCA_002088395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/395/GCA_002088395.1_ASM208839v1	-	A2
Escherichia coli	562	PRJNA312475	312475	Proteobacteria	Gammaproteobacteria	4.92614	50.9515	chromosome:NZ_CP020835.1/CP020835.1; plasmid pCFSAN051542:NZ_CP020836.1/CP020836.1	-	2	5153	4732	4/24/17	4/26/17	Complete Genome	FDA	SAMN05414625	GCA_002105735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/735/GCA_002105735.1_ASM210573v1	-	CFSAN051542
Virgibacillus halodenitrificans JCM 12304	1236975	PRJDB673	243657	Terrabacteria group	Firmicutes	3.8747	37.3	-	BAZS01	76	3795	3447	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00000428	GCA_001310895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/895/GCA_001310895.1_ASM131089v1	-	JCM 12304
Bacillus endophyticus	135735	PRJNA313129	313129	Terrabacteria group	Firmicutes	5.12148	36.5	-	LTAP01	42	5132	4922	3/14/16	4/12/17	Scaffold	KRIBB	SAMN04515758	GCA_001590825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/590/825/GCA_001590825.1_ASM159082v1	27174273	KCTC 13922
Aeribacillus pallidus	33936	PRJNA260734	260734	Terrabacteria group	Firmicutes	4.98586	57.4	-	JYCD01	185	5087	4812	3/5/15	4/10/17	Contig	Los Alamos National Laboratory	SAMN03025774	GCA_000948185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/185/GCA_000948185.1_BFA_1_A	26316637	GS3372
Paraburkholderia terrae	311230	PRJNA385388	385388	Proteobacteria	Betaproteobacteria	11.1727	61.8	-	NFVD01	657	10410	9759	5/24/17	5/26/17	Contig	University of Groningen	SAMN06888377	GCA_002157285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/285/GCA_002157285.1_ASM215728v1	-	BS110
Pseudomonas marginalis ICMP 9505	1198317	PRJNA296726	296726	Proteobacteria	Gammaproteobacteria	5.89355	59.6	-	LKGY01	144	5389	5133	12/15/15	4/11/17	Scaffold	New Zealand Institute for Plant & Food research	SAMN04102814	GCA_001467265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/265/GCA_001467265.1_ASM146726v1	27056212	ICMP 9505
Thermoanaerobacter thermohydrosulfuricus	1516	PRJEB17253	351417	Terrabacteria group	Firmicutes	2.72873	34.3	-	FONI01	130	2820	2498	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04324257	GCA_900112905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/905/GCA_900112905.1_IMG-taxon_2597490336_annotated_assembly	-	DSM 7021
Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223	1121098	PRJDB570	243830	FCB group	Bacteroidetes/Chlorobi group	4.443	42.7	-	BAJE01	166	3879	3052	4/1/14	4/10/17	Contig	The University of Tokyo	SAMD00003711	GCA_000613545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/545/GCA_000613545.1_ASM61354v1	-	JCM 13223
Acinetobacter baylyi TG19579	1221291	PRJNA172684	172684	Proteobacteria	Gammaproteobacteria	3.7469	40.2	-	AMIC01	95	3480	3357	10/2/12	4/6/17	Contig	Translational Genomics Research Institute	SAMN02471283	GCA_000302115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/115/GCA_000302115.1_ASM30211v1	-	TG19579
Alicycliphilus sp. 69-12	1895703	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	4.63312	68.5	-	MKUK01	96	4289	3956	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660579	GCA_001897775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/775/GCA_001897775.1_ASM189777v1	-	-
Shigella dysenteriae 1617	754093	PRJNA218020	218020	Proteobacteria	Gammaproteobacteria	4.4802	50.9501	chromosome:CP006736.1; plasmid pSLG231:CP006737.1	-	2	6503	6409	11/19/13	1/30/17	Complete Genome	Armed Forces Research Institute of Medical Sciences U.S. Army Medical Component Department of Enteric Diseases	SAMN05771127	GCA_000497505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/505/GCA_000497505.1_ASM49750v1	-	1617
Bacteriovorax sp. DB6_IX	1353530	PRJNA210327	210327	Proteobacteria	Oligoflexia	3.00097	37.6	-	AUNJ01	508	3120	2773	8/16/13	8/21/17	Contig	J. Craig Venter Institute	SAMN02436195	GCA_000447775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/775/GCA_000447775.1_Celera_Hybrid_Filtered	-	DB6_IX
Caldibacillus debilis	301148	PRJNA324718	324718	Terrabacteria group	Firmicutes	2.86332	52.2	-	LZRR01	244	3214	2949	5/30/17	5/30/17	Contig	Instituto de Quimica	SAMN05223359	GCA_002159135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/135/GCA_002159135.1_ASM215913v1	-	-
Oligella urethralis	90245	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	2.51152	46.2	-	JVMH01	140	2380	2214	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197495	GCA_001056285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/285/GCA_001056285.1_ASM105628v1	26230489	303_AMIM
Rodentibacter pneumotropicus	758	PRJDB3930	285402	Proteobacteria	Gammaproteobacteria	2.72024	40.2	-	BBXJ01	2	2659	2493	5/29/15	3/2/17	Contig	Juntendo Univ.	SAMD00031325	GCA_001019715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/715/GCA_001019715.1_ASM101971v1	-	ATCC 12555
Porphyromonas macacae JCM 15984	1236521	PRJDB609	243184	FCB group	Bacteroidetes/Chlorobi group	2.32457	43	-	BAKS01	69	2137	1725	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00016764	GCA_000614385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/385/GCA_000614385.1_ASM61438v1	-	JCM 15984
Methylotenera sp. L2L1	1502770	PRJNA248517	248517	Proteobacteria	Betaproteobacteria	2.64199	43.3	-	JQMG01	1	2488	2409	8/28/14	6/20/17	Contig	DOE Joint Genome Institute	SAMN02800689	GCA_000744605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/605/GCA_000744605.1_ASM74460v1	25657279	L2L1
Rhodopirellula sp. MGV	2023130	PRJNA394679	394679	PVC group	Planctomycetes	7.16444	55.3	-	NPDI01	77	5492	5271	8/14/17	8/16/17	Scaffold	University of Sao Paulo	SAMN07357232	GCA_002251265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/265/GCA_002251265.1_ASM225126v1	-	MGV
Legionella sp. 21-45-4	1970394	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	0.338398	45.4	-	NCAV01	205	436	414	8/16/17	8/16/17	Scaffold	None	SAMN06622442	GCA_002255255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/255/GCA_002255255.1_ASM225525v1	-	-
Corynebacterium halotolerans YIM 70093 = DSM 44683	1121362	PRJNA215338	215338	Terrabacteria group	Actinobacteria	3.2025	68.4	-	JIAJ01	26	2942	2821	4/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743911	GCA_000688435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/435/GCA_000688435.1_ASM68843v1	-	DSM 44683
Pandoraea sp. E26	1427365	PRJNA229202	229202	Proteobacteria	Betaproteobacteria	5.47695	64.7	-	AYXJ01	96	4904	4728	5/5/14	4/9/17	Contig	UNIVERSITY OF MALAYA	SAMN02744440	GCA_000681415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/415/GCA_000681415.1_De_novo	26021935	E26
Terrisporobacter glycolicus	36841	PRJEB17398	351573	Terrabacteria group	Firmicutes	3.98543	28.6	-	FORW01	18	3825	3726	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910355	GCA_900114105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/105/GCA_900114105.1_IMG-taxon_2595698217_annotated_assembly	-	KPPR-9
Dermabacter sp. HMSC08H10	1581144	PRJNA269913	269913	Terrabacteria group	Actinobacteria	2.24104	62.9	-	LWNQ01	18	1998	1907	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436136	GCA_001807585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/585/GCA_001807585.1_ASM180758v1	-	HMSC08H10
Mariprofundus sp. UBA1538	1946829	PRJNA348753	348753	Proteobacteria	Zetaproteobacteria	2.03089	59.1	-	DCPS01	30	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450536	GCA_002323725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/725/GCA_002323725.1_ASM232372v1	28894102	-
Hoeflea sp. BAL378	1547437	PRJNA261244	261244	Proteobacteria	Alphaproteobacteria	5.48354	65.4	-	JRJG01	281	5211	4985	9/29/14	4/9/17	Contig	Technical University of Denmark	SAMN03069733	GCA_000759435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/435/GCA_000759435.1_ASM75943v1	25414510	BAL378
Rhizobium gallicum bv. gallicum R602sp	1041138	PRJNA169700	169700	Proteobacteria	Alphaproteobacteria	7.22024	60.8	-	ARDC01	38	7085	6759	4/19/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02441721	GCA_000373025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/025/GCA_000373025.1_ASM37302v1	-	R602sp
Sinorhizobium sp. CCBAU 05631	794846	PRJNA77219	77219	Proteobacteria	Alphaproteobacteria	6.29776	62.4	-	AJQU01	242	6147	5563	5/3/12	5/19/17	Contig	China Agricultural University	SAMN02469491	GCA_000261005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/005/GCA_000261005.1_05631	22586130	CCBAU 05631
Acinetobacter bouvetii	202951	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.34707	45	-	BCMB01	25	3188	3075	12/2/15	4/6/17	Contig	National Institute of Technology and Evaluation	SAMD00019873	GCA_001485025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/025/GCA_001485025.1_ASM148502v1	-	GTC 3697
Saccharomonospora sp. LRS4.154	1962155	PRJNA376256	376256	Terrabacteria group	Actinobacteria	4.86011	71	-	MWIH01	13	4604	4457	4/3/17	4/5/17	Scaffold	University of Seville	SAMN06368464	GCA_002077655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/655/GCA_002077655.1_ASM207765v1	-	LRS4.154
Blautia producta	33035	PRJNA253252	253252	Terrabacteria group	Firmicutes	6.04683	46.7	-	JPJF01	174	5501	5258	10/9/14	4/9/17	Scaffold	Technical University of Denmark	SAMN02903323	GCA_000765245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/245/GCA_000765245.1_ASM76524v1	25163406	ER3
Wohlfahrtiimonas chitiniclastica DSM 18708	1123502	PRJNA169812	169812	Proteobacteria	Gammaproteobacteria	1.99102	44.1	-	AQXD01	7	1891	1833	4/20/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441394	GCA_000375345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/345/GCA_000375345.1_ASM37534v1	-	DSM 18708
Corynebacterium propinquum	43769	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.52139	56.5	-	JVSN01	82	2278	2160	7/10/15	4/10/17	Contig	University of Washington	SAMN03197333	GCA_001053555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/555/GCA_001053555.1_ASM105355v1	26230489	143_CAUR
Aureimonas ureilytica DSM 18598 = NBRC 106430	1121028	PRJDB3816	300645	Proteobacteria	Alphaproteobacteria	5.0973	67.3	-	BBWT01	106	4795	4629	11/7/15	4/11/17	Contig	"Graduate School of Life Sciences, Tohoku University"	SAMD00028749	GCA_001463945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/945/GCA_001463945.1_ASM146394v1	26534993	NBRC 106430
Shigella sonnei	624	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	4.92915	50.9384	chromosome:CP022459.1; plasmid unnamed1:CP022460.1; plasmid unnamed2:CP022461.1	-	3	5476	4273	7/24/17	7/24/17	Complete Genome	CDC	SAMN06843646	GCA_002224465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/465/GCA_002224465.1_ASM222446v1	-	2015C-3807
Aeromonas media	651	PRJNA260227	260227	Proteobacteria	Gammaproteobacteria	4.6201	61	-	JRBG01	185	4284	4064	9/16/14	4/9/17	Contig	Osaka Ohtani University	SAMN03018687	GCA_000754925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/925/GCA_000754925.1_ASM75492v1	25359918	ARB20
Hyphomonas sp. CY54-11-8	1280944	PRJNA186154	186154	Proteobacteria	Alphaproteobacteria	3.89745	60.7	-	AWFD01	38	3810	3708	5/6/14	4/9/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02746325	GCA_000682735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/735/GCA_000682735.1_SOAPdenovo_v1.05	-	CY54-11-8
Butyricicoccus pullicaecorum	501571	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.45595	53.6	-	NFKL01	77	3323	3152	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473643	GCA_002160385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/385/GCA_002160385.1_ASM216038v1	-	An179
Thioclava sp. F36-7	1915317	PRJNA352384	352384	Proteobacteria	Alphaproteobacteria	4.30153	63.9	-	MPZR01	34	4098	4009	3/6/17	3/9/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05970467	GCA_002020075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/075/GCA_002020075.1_ASM202007v1	-	F36-7
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	4.91085	50.9244	chromosome:NZ_CP010148.1/CP010148.1; plasmid A:NZ_CP010149.1/CP010149.1	-	2	5031	4726	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252424	GCA_001900695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/695/GCA_001900695.1_ASM190069v1	-	D6
Pseudomonas psychrophila	122355	PRJNA278112	278112	Proteobacteria	Gammaproteobacteria	5.26917	57.5	-	LBHT01	150	4948	4651	5/11/15	4/10/17	Contig	RAJIV GANDHI CENTRE FOR BIOTECHNOLOGY	SAMN03406680	GCA_001005765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/765/GCA_001005765.1_ASM100576v1	26067953	RGCB 166
Pseudoxanthomonas sp. Root630	1736574	PRJNA297942	297942	Proteobacteria	Gammaproteobacteria	4.44341	66.9	-	LMGY01	21	4103	3994	11/2/15	4/6/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155843	GCA_001427585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/585/GCA_001427585.1_Root630	26633631	Root630
Parageobacillus caldoxylosilyticus	81408	PRJNA270597	270597	Terrabacteria group	Firmicutes	3.94959	44	-	LQYS01	144	4041	3712	3/11/16	4/12/17	Scaffold	University of Groningen	SAMN03267290	GCA_001587505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/505/GCA_001587505.1_ASM158750v1	27151781	B4119
Halorubrum sp. SAH-A6	1758255	PRJNA302707	302707	Euryarchaeota	Halobacteria	3.32577	68	-	LOAJ01	3	3240	3086	1/29/16	3/29/17	Contig	Silla university	SAMN04278861	GCA_001542905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/905/GCA_001542905.1_ASM154290v1	-	SAH-A6
Clostridium tyrobutyricum UC7086	1212547	PRJNA170963	170963	Terrabacteria group	Firmicutes	3.06421	30.8	-	ANOE01	110	2994	2869	1/17/13	3/31/17	Contig	Universita Cattolica del Sacro Cuore	SAMN02471393	GCA_000332015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/015/GCA_000332015.1_1st_assembly	23950123	UC7086
Burkholderia pyrrocinia	60550	PRJNA257834	257834	Proteobacteria	Betaproteobacteria	7.79272	66.7	-	JPWP01	73	7223	6878	8/26/14	4/9/17	Contig	Mississippi State University	SAMN02979295	GCA_000743695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/695/GCA_000743695.1_LYC2_genome1.0	25278535	Lyc2
Nocardia seriolae	37332	PRJNA248611	248611	Terrabacteria group	Actinobacteria	7.70809	68.3	-	JNCT01	315	7191	6731	10/3/14	4/9/17	Scaffold	Guangdong Ocean University	SAMN02800874	GCA_000763165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/165/GCA_000763165.1_ASM76316v1	25555736	ZJ0503
Acidocella sp. 20-57-95	1970301	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	3.04275	57.1	-	NCAT01	102	2985	2883	8/16/17	8/16/17	Scaffold	None	SAMN06622444	GCA_002255575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/575/GCA_002255575.1_ASM225557v1	-	-
Limnohabitans sp. Rim47	1100721	PRJNA171294	171294	Proteobacteria	Betaproteobacteria	3.02587	58.5	-	ALKO01	230	2866	2786	8/24/12	4/7/17	Contig	"Institute of Microbiology, Academy of Sciences, Czech Republic"	SAMN02470022	GCA_000292865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/865/GCA_000292865.1_ASM29286v1	23105051	Rim47
Oscillibacter sp. KLE 1745	1226323	PRJNA173638	173638	Terrabacteria group	Firmicutes	3.59423	59.4	-	AWVO01	143	3629	3381	9/18/13	4/16/17	Scaffold	Washington University	SAMN02436751	GCA_000469445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/445/GCA_000469445.2_ASM46944v2	-	KLE 1745
Pseudoalteromonas ruthenica	151081	PRJNA242743	242743	Proteobacteria	Gammaproteobacteria	4.06663	47.4	-	JXXZ01	37	3760	3656	4/1/15	4/10/17	Contig	Technical University of Denmark	SAMN03323942	GCA_000967625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/625/GCA_000967625.1_S3137	25879706	S3137
Mycobacterium fortuitum Z58	1451190	PRJNA235937	235937	Terrabacteria group	Actinobacteria	4.84107	64.1	-	JASW01	92	4850	4672	4/1/14	4/2/17	Contig	zhejiang university	SAMN02592736	GCA_000611915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/915/GCA_000611915.1_Mycobacterium_fortuitum_Z58	-	Z58
Aeromonas sp. HZM	1454008	PRJNA236450	236450	Proteobacteria	Gammaproteobacteria	4.45136	61.7	-	JEMQ01	120	4145	3894	6/11/14	4/9/17	Contig	Monash University Sunway Campus	SAMN02596469	GCA_000701085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/085/GCA_000701085.1_AeroHZM_1.0	26484220	HZM
Pseudomonas alcaligenes NBRC 14159	1215092	PRJDB200	171619	Proteobacteria	Gammaproteobacteria	4.82339	64.8	-	BATI01	122	4526	4357	9/12/13	4/9/17	Contig	National Institute of Technology and Evaluation	SAMD00041817	GCA_000467105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/105/GCA_000467105.1_ASM46710v1	-	NBRC 14159
Pseudomonas azotoformans	47878	PRJEB16206	348952	Proteobacteria	Gammaproteobacteria	6.72739	61	chromosome I:NZ_LT629702.1/LT629702.1	-	1	6128	5935	10/20/16	4/13/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489799	GCA_900103345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/345/GCA_900103345.1_IMG-taxon_2636416017_annotated_assembly	-	LMG 21611
Pseudomonas citronellolis	53408	PRJNA296464	296464	Proteobacteria	Gammaproteobacteria	6.64323	67.4	-	LKJO01	162	5922	5731	11/19/15	4/11/17	Contig	Texas Tech University	SAMN04099647	GCA_001446495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/495/GCA_001446495.1_ASM144649v1	26824353	TTU2014-008ASC
Pseudomonas indica	137658	PRJEB16003	348204	Proteobacteria	Gammaproteobacteria	5.78692	64.1	-	FNFD01	64	5253	5070	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216186	GCA_900100285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/285/GCA_900100285.1_IMG-taxon_2663762782_annotated_assembly	-	JCM 21544
Pseudomonas nitroreducens TX1	1226994	PRJNA173805	173805	Proteobacteria	Gammaproteobacteria	6.69441	64.5	-	AMZB01	138	6281	6108	11/21/12	5/19/17	Contig	National Central University	SAMN02470611	GCA_000313755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/755/GCA_000313755.1_Pseudomonas_sp.TX1_v1.0	24482523	TX1
Pseudomonas oryzihabitans	47885	PRJNA276061	276061	Proteobacteria	Gammaproteobacteria	5.09297	66	-	JYKV01	47	4701	4582	3/2/15	4/10/17	Contig	Monash University Malaysia	SAMN03365871	GCA_000935305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/305/GCA_000935305.1_Pseu_ory_RIT370_v1	25883290	RIT370
Pseudomonas parafulva NBRC 16636 = DSM 17004	1215114	PRJNA188912	188912	Proteobacteria	Gammaproteobacteria	4.95662	62.5	-	AUEB01	32	4536	4381	7/10/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02441530	GCA_000425765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/765/GCA_000425765.1_ASM42576v1	-	DSM 17004
Pseudomonas plecoglossicida NBRC 103162 = DSM 15088	1215115	PRJDB223	171642	Proteobacteria	Gammaproteobacteria	5.3418	63	-	BBIV01	97	4901	4678	7/10/14	4/9/17	Contig	National Institute of Technology and Evaluation	SAMD00018427	GCA_000730665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/665/GCA_000730665.1_ASM73066v1	-	NBRC 103162
Helicobacter heilmannii	35817	PRJEB7975	293180	Proteobacteria	delta/epsilon subdivisions	1.67121	47.5	-	CDMJ01	136	1745	1543	8/17/15	4/11/17	Scaffold	UGENT	SAMEA3174165	GCA_001283005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/005/GCA_001283005.1_Hheil	-	-
Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535	1216967	PRJDB229	171897	FCB group	Bacteroidetes/Chlorobi group	3.84029	36.4	-	BARD01	34	3454	3396	4/10/13	4/1/17	Contig	National Institute of Technology and Evaluation	SAMD00041814	GCA_000367325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/325/GCA_000367325.1_ASM36732v1	23846266	NBRC 12535
Roseomonas sp. M3	1817963	PRJNA347882	347882	Proteobacteria	Alphaproteobacteria	6.24986	71.1	-	MLCO01	597	5903	5446	2/1/17	4/17/17	Contig	Kyonggi University	SAMN05898134	GCA_001982615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/615/GCA_001982615.1_ASM198261v1	-	M3
Shigella dysenteriae Sd197	300267	PRJNA13145	13145	Proteobacteria	Gammaproteobacteria	4.56091	50.921	chromosome:NC_007606.1/CP000034.1; plasmid pSD197_spA:NC_009344.1/CP000640.1; plasmid pSD1_197:NC_007607.1/CP000035.1	-	3	4834	4294	11/9/05	8/3/16	Complete Genome	Microbial Genome Center of ChMPH	SAMN02603600	GCA_000012005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/005/GCA_000012005.1_ASM1200v1	16275786	Sd197
Paraburkholderia fungorum	134537	PRJEB15932	348244	Proteobacteria	Betaproteobacteria	8.58117	61.2	-	FNKP01	4	7571	7337	10/20/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443245	GCA_900099835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/835/GCA_900099835.1_IMG-taxon_2690315676_annotated_assembly	-	GAS106B
Paraburkholderia kururiensis JCM 10599	1236956	PRJDB655	243239	Proteobacteria	Betaproteobacteria	6.8384	64.2	-	BAMQ01	2352	-	-	4/1/14	9/16/15	Contig	The University of Tokyo	SAMD00003591	GCA_000616025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/025/GCA_000616025.1_ASM61602v1	-	JCM 10599
Escherichia coli	562	PRJNA316786	316786	Proteobacteria	Gammaproteobacteria	5.25275	50.9192	chromosome:NZ_CP019000.1/CP019000.1; plasmid pECAZ153_2:NZ_CP018998.1/CP018998.1; plasmid pECAZ153_3:NZ_CP018997.1/CP018997.1; plasmid pECAZ153_4:NZ_CP018996.1/CP018996.1; plasmid pECAZ153_KPC:NZ_CP018999.1/CP018999.1	-	5	5527	5153	3/3/17	3/6/17	Complete Genome	University of Oxford	SAMN05511160	GCA_002012245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/245/GCA_002012245.1_ASM201224v1	-	Ecol_AZ153
Serratia rubidaea NBRC 103169	1218096	PRJDB269	172092	Proteobacteria	Gammaproteobacteria	4.95751	59.3	-	BCZJ01	29	4645	4505	3/11/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046903	GCA_001598675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/675/GCA_001598675.1_ASM159867v1	-	NBRC 103169
Kluyvera intermedia NBRC 102594 = ATCC 33110	1218113	PRJDB286	172109	Proteobacteria	Gammaproteobacteria	4.64018	52.6	-	BCYS01	109	4473	4249	3/11/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046734	GCA_001598315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/315/GCA_001598315.1_ASM159831v1	-	NBRC 102594
Rhodococcus koreensis JCM 10743 = NBRC 100607	1303689	PRJDB947	245965	Terrabacteria group	Actinobacteria	8.29186	66.3	-	BBGF01	4096	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016919	GCA_001313625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/625/GCA_001313625.1_ASM131362v1	-	JCM 10743
Escherichia coli	562	PRJNA316786	316786	Proteobacteria	Gammaproteobacteria	5.41829	50.9191	chromosome:NZ_CP015138.1/CP015138.1; plasmid pEC732_2:NZ_CP015140.1/CP015140.1; plasmid pEC732_3:NZ_CP015141.1/CP015141.1; plasmid pEC732_4:NZ_CP015142.1/CP015142.1; plasmid pEC732_5:NZ_CP015143.1/CP015143.1; plasmid pEC732_6:NZ_CP015144.1/CP015144.1; plasmid pEC732_IMP14:NZ_CP015139.1/CP015139.1	-	7	5712	5322	4/8/16	2/25/17	Complete Genome	University of Oxford	SAMN04621897	GCA_001617565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/565/GCA_001617565.1_ASM161756v1	-	Ecol_732
Rhodococcus rhodnii	38312	PRJNA238534	238534	Terrabacteria group	Actinobacteria	12.4183	66.3	-	JOAA01	182	-	-	7/2/14	7/2/14	Contig	University of Illinois	SAMN02645355	GCA_000720375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/375/GCA_000720375.1_ASM72037v1	-	NRRL B-16535
Rhodococcus triatomae NBRC 103116	1219026	PRJDB305	172273	Terrabacteria group	Actinobacteria	4.73601	68.7	-	BCXF01	57	4437	4297	12/6/16	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00046771	GCA_001894965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/965/GCA_001894965.1_ASM189496v1	-	NBRC 103116
Comamonas aquatica NBRC 14918	1219031	PRJDB310	172278	Proteobacteria	Betaproteobacteria	3.73235	65.2	-	BBJR01	103	3440	3260	8/2/14	4/9/17	Contig	National Institute of Technology and Evaluation	SAMD00018639	GCA_000739875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/875/GCA_000739875.1_ASM73987v1	-	NBRC 14918
Sphingobium herbicidovorans NBRC 16415	1219045	PRJDB324	172292	Proteobacteria	Alphaproteobacteria	4.08313	62.4	-	BCZD01	86	4010	3841	3/11/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046715	GCA_001598535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/535/GCA_001598535.1_ASM159853v1	-	NBRC 16415
Sphingomonas paucimobilis	13689	PRJNA282437	282437	Proteobacteria	Alphaproteobacteria	4.29594	65.7	-	LDUA01	77	4006	3846	6/18/15	4/10/17	Contig	Chinese PLA General Hospital	SAMN03570042	GCA_001029575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/575/GCA_001029575.1_ASM102957v1	26918090	LCT-SP1
Sphingomonas sanguinis	33051	PRJNA278219	278219	Proteobacteria	Alphaproteobacteria	3.86818	66	-	LDTC01	346	3608	3378	12/22/15	4/11/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401384	GCA_001477315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/315/GCA_001477315.1_ASM147731v1	26793183	NS258
Escherichia coli	562	PRJNA270222	270222	Proteobacteria	Gammaproteobacteria	5.1065	50.9086	chromosome:NZ_CP010371.1/CP010371.1; plasmid p6409-151.583kb:NZ_CP010372.1/CP010372.1; plasmid p6409-202.186kb:NZ_CP010373.2/CP010373.2	-	3	5332	4945	1/5/15	2/23/17	Complete Genome	JCVI	SAMN03263950	GCA_000814145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/145/GCA_000814145.2_ASM81414v2	-	6409
Sphingopyxis granuli NBRC 100800	1219060	PRJDB339	172308	Proteobacteria	Alphaproteobacteria	4.25505	66.4	-	BCUA01	181	3893	3739	2/23/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046718	GCA_001591045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/045/GCA_001591045.1_ASM159104v1	-	NBRC 100800
Vibrio gazogenes	687	PRJEB17713	357221	Proteobacteria	Gammaproteobacteria	4.01811	45.4	-	FULF01	216	3676	3381	2/11/17	4/17/17	Contig	UVEG	SAMEA78796918	GCA_900163915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/915/GCA_900163915.1_V_gazogenes_CECT5068T_Velvet_Prokka_EMBL	-	type strain: CECT 5068
Vibrio mediterranei	689	PRJEB14144	327045	Proteobacteria	Gammaproteobacteria	5.66861	44.1	-	FLLQ01	43	5251	5052	6/24/16	4/13/17	Contig	UVEG	SAMEA2343670	GCA_900088415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/415/GCA_900088415.1_VmediterraneiCECT0621_SPAdes_Prokka	-	-
Pluralibacter gergoviae	61647	PRJNA285085	285085	Proteobacteria	Gammaproteobacteria	5.64252	58.9	-	LDZF01	144	5446	5110	6/23/15	4/3/17	Contig	UCSF	SAMN03737704	GCA_001038225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/225/GCA_001038225.1_ASM103822v1	-	JS81F13
Actinomadura madurae	1993	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.62822	71	-	JNZC01	5896	-	-	7/1/14	7/1/14	Scaffold	University of Illinois	SAMN02645330	GCA_000715965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/965/GCA_000715965.1_ASM71596v1	-	NRRL B-2203
Pseudothermotoga hypogea DSM 11164 = NBRC 106472	1123384	PRJNA234847	234847	Thermotogae	Thermotogae	2.14965	49.5	-	JONI01	12	2134	2058	6/24/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02745783	GCA_000711815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/815/GCA_000711815.1_ASM71181v1	-	DSM 11164
Lelliottia amnigena CHS 78	1439331	PRJNA234247	234247	Proteobacteria	Gammaproteobacteria	4.85232	55	-	JMZV01	9	4749	4462	5/19/14	4/10/17	Scaffold	Broad Institute	SAMN02581380	GCA_000694955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/955/GCA_000694955.1_Lell_amni_CHS_78_V1	-	CHS 78
Gordonia amicalis NBRC 100051 = JCM 11271	1220574	PRJDB954	245269	Terrabacteria group	Actinobacteria	3.97166	66.6	-	BBGK01	2337	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016921	GCA_001313725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/725/GCA_001313725.1_ASM131372v1	-	JCM 11271
Delftia tsuruhatensis	180282	PRJNA283558	283558	Proteobacteria	Betaproteobacteria	5.73718	66.9	-	LCZH01	62	5163	5016	6/8/15	4/10/17	Contig	Shandong Agricultural University	SAMN03651235	GCA_001021565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/565/GCA_001021565.1_ASM102156v1	26251486	MTQ3
Granulicoccus phenolivorans JCM 15570	1303682	PRJDB939	245960	Terrabacteria group	Actinobacteria	3.32036	68.5	-	BBFX01	1755	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016941	GCA_001313465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/465/GCA_001313465.1_ASM131346v1	-	JCM 15570
Bacillus sonorensis L12	1274524	PRJNA184376	184376	Terrabacteria group	Firmicutes	4.64775	45.2	-	AOFM01	34	4808	4511	2/26/13	6/15/17	Contig	University of Copenhagen	SAMN02471705	GCA_000342105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/105/GCA_000342105.1_Draft_Genome_Sequence_of_Bacillus_sonorensis_L12	23538904	L12
Shewanella algae	38313	PRJNA255462	255462	Proteobacteria	Gammaproteobacteria	4.87943	53.1	-	JPMA01	43	4596	3153	3/19/15	4/10/17	Contig	Aix marseille university	SAMN02921234	GCA_000956365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/365/GCA_000956365.1_ASM95636v1	26380631	C6G3
Lysinibacillus odysseyi 34hs-1 = NBRC 100172	1220589	PRJNA214583	214583	Terrabacteria group	Firmicutes	4.51282	41	-	AVCX01	60	4502	4358	6/19/17	6/22/17	Contig	Huazhong Agricultural University	SAMN07255465	GCA_002200835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/835/GCA_002200835.1_ASM220083v1	-	NBRC 100172
Blastococcus sp. DSM 44268	1550231	PRJEB15846	347803	Terrabacteria group	Actinobacteria	4.16305	73.6	-	FNBT01	18	4070	3939	10/20/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05660662	GCA_900102425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/425/GCA_900102425.1_IMG-taxon_2599185358_annotated_assembly	-	DSM 44268
Acinetobacter schindleri CIP 107287	1217988	PRJNA183293	183293	Proteobacteria	Gammaproteobacteria	3.39456	42.3	-	APPQ01	18	3272	3097	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01828163	GCA_000368625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/625/GCA_000368625.1_Acin_schi_CIP107287_V1	-	CIP 107287
Lactobacillus florum 8D	1221538	PRJNA172731	172731	Terrabacteria group	Firmicutes	1.28263	41.5	-	ALXG01	49	1270	1218	12/31/13	4/9/17	Contig	"University of California, Davis"	SAMN02597458	GCA_000512295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/295/GCA_000512295.1_8D_v3c	-	8D
Dickeya solani MK10	1224151	PRJNA172957	172957	Proteobacteria	Gammaproteobacteria	4.93524	56.2024	chromosome:NZ_CM001839.1/CM001839.1	AOOP01	3	4345	4101	4/3/13	4/1/17	Chromosome	James Hutton Institute	SAMN02470099	GCA_000365285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/285/GCA_000365285.1_DSOMK10_1.0	23887905	MK10
Dickeya dianthicola NCPPB 3534	1223570	PRJNA172903	172903	Proteobacteria	Gammaproteobacteria	4.86739	55.6436	chromosome:NZ_CM001840.1/CM001840.1	AOOK01	100	4435	4152	4/3/13	4/11/17	Chromosome	James Hutton Institute	SAMN02470097	GCA_000365405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/405/GCA_000365405.2_DDI3534_1.0	23887905	NCPPB 3534
Dickeya sp. DW 0440	1225785	PRJNA173398	173398	Proteobacteria	Gammaproteobacteria	4.34194	53.3482	chromosome:NZ_CM001983.1/CM001983.1	AOON01	47	3910	3642	6/4/13	4/17/17	Chromosome	James Hutton Institute	SAMN02470098	GCA_000406285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/285/GCA_000406285.1_DXXDW0440_1.0	24265502	DW 0440
Corynebacterium vitaeruminis	38305	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.48818	58.6	-	JVVM01	35	2172	2082	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197256	GCA_001054325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/325/GCA_001054325.1_ASM105432v1	26230489	1285_CVIT
Moraxella lacunata	477	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.68624	44.4	-	LZDR01	125	2546	2424	7/5/16	4/13/17	Scaffold	TAILORED-Treatment project	SAMN05214411	GCA_001679265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/265/GCA_001679265.1_ASM167926v1	-	CCUG 65142
Moraxella atlantae	34059	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.2108	48.4	-	LZMZ01	54	2012	1882	7/5/16	4/13/17	Scaffold	TAILORED-Treatment project	SAMN05213942	GCA_001679065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/065/GCA_001679065.1_ASM167906v1	-	CCUG 66109
Cellulomonas iranensis NBRC 101100 = JCM 18110	1223509	PRJDB979	243803	Terrabacteria group	Actinobacteria	0.565365	69.1	-	BBHH01	584	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017021	GCA_001315225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/225/GCA_001315225.1_ASM131522v1	-	JCM 18110
Microbacterium hydrocarbonoxydans	273678	PRJEB16437	349338	Terrabacteria group	Actinobacteria	3.59479	68.6	-	FNSQ01	8	3456	3291	10/22/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04489807	GCA_900105205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/205/GCA_900105205.1_IMG-taxon_2634166363_annotated_assembly	-	DSM 16089
Corynebacterium minutissimum NBRC 15361	1223512	PRJDB438	173157	Terrabacteria group	Actinobacteria	2.66345	60	-	BCRC01	42	2481	2356	2/5/16	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00046517	GCA_001552395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/395/GCA_001552395.1_ASM155239v1	-	NBRC 15361
Microbacterium oleivorans	273677	PRJNA312426	312426	Terrabacteria group	Actinobacteria	2.97401	70.7	-	LSTV01	6	2874	2795	5/13/16	4/12/17	Contig	Institute of Microbial Technology	SAMN04497890	GCA_001644225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/225/GCA_001644225.1_ASM164422v1	-	CD11_3
Microbacterium paraoxydans DH1b	1416752	PRJNA226198	226198	Terrabacteria group	Actinobacteria	3.61777	70.2	-	AYME01	47	3547	3437	4/18/14	4/9/17	Contig	University of Malaya	SAMN02729844	GCA_000633215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/215/GCA_000633215.1_de_novo	-	DH1b
Corynebacterium xerosis	1725	PRJEB19160	384541	Terrabacteria group	Actinobacteria	4.49946	69.9	-	FWFI01	95	4091	4041	4/28/17	4/28/17	Contig	MICALIS	SAMEA80390668	GCA_900163615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/615/GCA_900163615.1_ASM90016361v1	-	B Mi 98.15
Lactobacillus nodensis DSM 19682 = JCM 14932 = NBRC 107160	1423775	PRJDB458	173177	Terrabacteria group	Firmicutes	2.68245	37.6	-	BCWC01	24	2669	2561	2/27/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046912	GCA_001592065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/065/GCA_001592065.1_ASM159206v1	-	NBRC 107160
Mycobacterium chlorophenolicum JCM 7439 = NBRC 15527	1303685	PRJDB943	245964	Terrabacteria group	Actinobacteria	4.29678	65.9	-	BBGB01	3027	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016952	GCA_001313545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/545/GCA_001313545.1_ASM131354v1	-	JCM 7439
Blautia sp. Marseille-P3087	1917876	PRJEB18016	354771	Terrabacteria group	Firmicutes	3.30891	42.5	-	FQLI01	3	3152	2940	11/24/16	4/16/17	Scaffold	URMITE	SAMEA4554919	GCA_900120195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/195/GCA_900120195.1_PRJEB18016	-	Marseille-P3087
Nocardia rhamnosiphila NBRC 108938	1223547	PRJDB473	173192	Terrabacteria group	Actinobacteria	7.74927	68.4	-	BDCL01	120	7040	6804	4/1/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00040664	GCA_001613485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/485/GCA_001613485.1_ASM161348v1	-	NBRC 108938
Mycobacterium mucogenicum	56689	PRJNA299404	299404	Terrabacteria group	Actinobacteria	6.47057	66.9	-	LSKL01	534	6273	5865	2/10/16	4/12/17	Contig	Georgia Institute of Technology	SAMN04299488	GCA_001557045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/045/GCA_001557045.1_ASM155704v1	-	CCH12-A2
Lactobacillus saerimneri DSM 16049	1122153	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.69296	42.6	-	AZFP01	92	1684	1609	11/6/15	4/11/17	Contig	Shanghai Majorbio	SAMN02369413	GCA_001435165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/165/GCA_001435165.1_ASM143516v1	26415554	DSM 16049
Escherichia coli	562	PRJNA307507	307507	Proteobacteria	Gammaproteobacteria	5.25638	50.9077	chromosome:NZ_CP014497.1/CP014497.1; plasmid pZH193:NZ_CP014498.1/CP014498.1	-	2	5521	5111	2/23/16	2/25/17	Complete Genome	University of Minnesota	SAMN04381846	GCA_001566675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/675/GCA_001566675.1_ASM156667v1	-	ZH193
Bacteroides pyogenes F0041	1321819	PRJNA198884	198884	FCB group	Bacteroidetes/Chlorobi group	3.56817	46.4	-	AWSV01	120	3041	2827	9/12/13	4/9/17	Scaffold	Washington University	SAMN02436886	GCA_000466505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/505/GCA_000466505.1_ASM46650v1	-	F0041
Brevibacterium casei	33889	PRJNA375758	375758	Terrabacteria group	Actinobacteria	3.88566	67.5	-	NCWY01	315	3446	3327	8/29/17	8/30/17	Contig	SysMilk	SAMN06718493	GCA_002276605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/605/GCA_002276605.1_ASM227660v1	-	OG2
Gordonia sp. 1D	1737359	PRJNA406861	406861	Terrabacteria group	Actinobacteria	5.15162	67.4	chromosome:CP023405.1	-	1	4682	4408	9/21/17	9/21/17	Chromosome	IBPM RAS	SAMN07629044	GCA_002327125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/125/GCA_002327125.1_ASM232712v1	-	1D
Anoxybacillus sp. DT3-1	690871	PRJNA182115	182115	Terrabacteria group	Firmicutes	2.59664	41.5	-	ANMT01	52	2740	2649	3/12/13	4/17/17	Contig	Universiti Teknologi Malaysia	SAMN02471428	GCA_000346275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/275/GCA_000346275.1_DT3-1dn	24603481	DT3-1
Acinetobacter tjernbergiae	202955	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.66676	38.5	-	BBND01	57	3509	3332	9/26/14	4/6/17	Contig	National Institute of Technology and Evaluation	SAMD00019899	GCA_000759995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/995/GCA_000759995.1_ASM75999v1	-	DSM 14971
Bacteroides graminisolvens	477666	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.03675	41.8	-	DFUS01	178	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450892	GCA_002379765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/765/GCA_002379765.1_ASM237976v1	28894102	-
Mucilaginibacter sp. L294	1643920	PRJNA289306	289306	FCB group	Bacteroidetes/Chlorobi group	5.25074	43.5	-	LGEK01	285	4635	4531	4/29/16	4/12/17	Contig	Institute of Microbiology of the ASCR	SAMN03852563	GCA_001636615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/615/GCA_001636615.1_ASM163661v1	-	L294
Pelomonas sp. Root1444	1736464	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	5.88728	69	-	LMFP01	33	5293	5146	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155733	GCA_001426885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/885/GCA_001426885.1_Root1444	26633631	Root1444
Rhizobacter sp. Root1238	1736435	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	6.52147	69.1	-	LMDM01	50	5873	5716	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155704	GCA_001425825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/825/GCA_001425825.1_Root1238	26633631	Root1238
Desulfuromonas sp. SDB	1735325	PRJNA293354	293354	Proteobacteria	delta/epsilon subdivisions	3.13969	37.9	-	LKUE01	433	2986	2729	10/26/15	10/26/15	Contig	University of Oklahoma	SAMN04125646	GCA_001412365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/365/GCA_001412365.1_ASM141236v1	-	-
Donghicola sp. S598	1232674	PRJNA175352	175352	Proteobacteria	Alphaproteobacteria	3.22122	65.7	-	AMWC01	2046	-	-	10/26/12	1/8/14	Contig	Korea Institute of Ocean Science & Technology	SAMN02470145	GCA_000308135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/135/GCA_000308135.1_ASM30813v1	-	S598
Paraclostridium bifermentans WYM	1391646	PRJNA216125	216125	Terrabacteria group	Firmicutes	3.476	28	-	AVSU01	180	3322	3246	11/22/13	4/9/17	Contig	Monash University	SAMN02324641	GCA_000498455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/455/GCA_000498455.1_WYM_1.0	24604639	WYM
Gramella sp. MAR_2010_147	1250205	PRJEB16428	349356	FCB group	Bacteroidetes/Chlorobi group	3.15858	37.1	chromosome I:NZ_LT629741.1/LT629741.1	-	1	2857	2766	10/21/16	7/28/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04488553	GCA_900105135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/135/GCA_900105135.1_IMG-taxon_2634166336_annotated_assembly	-	MAR_2010_147
Bhargavaea cecembensis	394098	PRJNA308276	308276	Terrabacteria group	Firmicutes	3.21169	53.7	-	LQNT01	16	3216	3132	4/13/16	4/12/17	Contig	University of Malaya	SAMN04390195	GCA_001619585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/585/GCA_001619585.1_ASM161958v1	-	T14
Anaerotruncus sp. CAG:390	1262703	PRJEB864	206762	Terrabacteria group	Firmicutes	2.44333	54	-	CBID01	217	2269	2237	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138735	GCA_000437015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/015/GCA_000437015.1_MGS390	-	-
Lactobacillus murinus DSM 20452 = NBRC 14221	1423772	PRJDB1320	231377	Terrabacteria group	Firmicutes	2.12318	40	-	BCVJ01	139	2031	1936	2/27/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046917	GCA_001591685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/685/GCA_001591685.1_ASM159168v1	-	NBRC 14221
[Flexibacter] sp. ATCC 35208	1936242	PRJNA360555	360555	FCB group	Bacteroidetes/Chlorobi group	8.63054	43.4	-	MTKN01	385	7023	6833	1/30/17	4/17/17	Scaffold	McMaster University	SAMN06212349	GCA_001975825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/825/GCA_001975825.1_ASM197582v1	-	ATCC 35208
Massilia sp. Root351	1736522	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	7.20733	65.8	-	LMDJ01	36	6337	6152	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155791	GCA_001425045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/045/GCA_001425045.1_Root351	26633631	Root351
Bacillus stratosphericus	293386	PRJNA277412	277412	Terrabacteria group	Firmicutes	3.73311	41.2	-	LDWI01	47	3856	3738	6/24/15	4/3/17	Contig	University of Malaya	SAMN03744445	GCA_001038845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/845/GCA_001038845.1_ASM103884v1	-	LK18
Kocuria palustris	71999	PRJNA307136	307136	Terrabacteria group	Actinobacteria	2.83343	70.4	-	LQBJ01	18	2513	2378	12/31/15	4/11/17	Contig	Institute of Microbial Technology	SAMN04376006	GCA_001483775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/483/775/GCA_001483775.1_ASM148377v1	27125478	CD07_3
Mycobacterium simiae	1784	PRJNA378996	378996	Terrabacteria group	Actinobacteria	6.68682	66.1	-	MZZM01	50	6294	6054	4/17/17	4/21/17	Contig	"Laboratorio Nacional de Genomica para la Biodiversidad, Unidad de Genomica Avanzada"	SAMN06564598	GCA_002093075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/075/GCA_002093075.1_ASM209307v1	-	MsiGto
Dokdonia sp. PRO95	1239415	PRJNA176625	176625	FCB group	Bacteroidetes/Chlorobi group	3.30519	37.4	chromosome:NZ_CM001837.1/CM001837.1	ANPJ01	1	2990	2900	4/5/13	4/9/17	Chromosome	Helmholtz-Centre for Infection Research	SAMN02469890	GCA_000355805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/805/GCA_000355805.1_ASM35580v1	23526944	PRO95
Leptospira alstonii serovar Sichuan str. 79601	1218565	PRJNA177155	177155	Spirochaetes	Spirochaetia	4.43641	42.5	-	ANIK01	125	4262	3932	3/15/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01801604	GCA_000347175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/175/GCA_000347175.1_gls454194v01	-	79601
Neisseria zoodegmatis	326523	PRJEB6403	251923	Proteobacteria	Betaproteobacteria	2.55252	50.9	chromosome 1:NZ_LT906434.1/LT906434.1	-	1	2413	2280	8/15/17	8/28/17	Complete Genome	SC	SAMEA4504057	GCA_900187305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/305/GCA_900187305.1_51470_F02	-	NCTC12230
Haloferax sp. ATCC BAA-646	1227464	PRJNA174909	174909	Euryarchaeota	Halobacteria	3.60953	66.6	-	AOLD01	48	3607	3477	2/4/13	4/10/17	Contig	"University of California, Davis"	SAMN02471676	GCA_000336855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/855/GCA_000336855.1_ASM33685v1	25393412	ATCC BAA-646
Staphylococcus pettenkoferi	170573	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.5035	38.9	-	JVVL01	67	2351	2280	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197257	GCA_001076095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/095/GCA_001076095.1_ASM107609v1	26230489	1286_SHAE
Moorea producens 3L	489825	PRJNA60895	60895	Terrabacteria group	Cyanobacteria/Melainabacteria group	8.47861	43.7	-	AEPQ01	161	6962	6246	5/9/11	4/7/17	Scaffold	"University of California, San Diego, Scripps Institution of Oceanography"	SAMN02471690	GCA_000211815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/211/815/GCA_000211815.1_ASM21181v1	21555588	3L
Pseudomonas umsongensis UNC430CL58Col	1380369	PRJNA213757	213757	Proteobacteria	Gammaproteobacteria	6.45617	59.3	-	JHVT01	28	5963	5781	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02952999	GCA_000620285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/285/GCA_000620285.1_ASM62028v1	-	UNC430CL58Col
Ochrobactrum sp. EGD-AQ16	1390361	PRJNA215965	215965	Proteobacteria	Alphaproteobacteria	4.83434	57.6	-	AWEU01	53	4659	4465	9/11/13	4/11/17	Contig	National Environmental Engineering Research Institute-CSIR	SAMN02469689	GCA_000465835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/835/GCA_000465835.2_GS_De_Novo_Assembly	-	EGD-AQ16
Vibrio jasicida	766224	PRJDB4409	317453	Proteobacteria	Gammaproteobacteria	5.94513	45.1	-	BCNC01	442	5505	5276	4/8/16	9/19/17	Scaffold	"Department of Bacteriology, Faculty of Medical Sciences, Kyushu university"	SAMD00043915	GCA_001625175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/625/175/GCA_001625175.1_ViCECT7692_1.0	-	BFLP-10
Halobacillus sp. KGW1	1793726	PRJNA310423	310423	Terrabacteria group	Firmicutes	3.68382	47	-	LSOC01	11	3831	3741	3/16/16	4/12/17	Scaffold	"KIIT School of Biotechnology, KIIT University"	SAMN04452730	GCA_001592845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/845/GCA_001592845.1_ASM159284v1	27365341	KGW1
Pseudomonas resinovorans	53412	PRJDB5445	369068	Proteobacteria	Gammaproteobacteria	6.25294	63.4	-	BDMA01	122	5676	5522	1/27/17	4/17/17	Scaffold	"Department of Civil and Environmental Engineering, Graduate School of Engineering, Hiroshima University"	SAMD00071031	GCA_002003485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/003/485/GCA_002003485.1_ASM200348v1	-	MO-1
Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162	1293597	PRJEB174	177236	Terrabacteria group	Firmicutes	2.15477	47.8	-	CAMA01	232	2167	1912	9/24/12	4/8/17	Contig	Sycou	SAMEA2272084	GCA_000312645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/645/GCA_000312645.1_ASM31264v1	-	type strain:CIP 110162
Porphyrobacter sp. HL-46	1479239	PRJNA245555	245555	Proteobacteria	Alphaproteobacteria	3.17497	64.2	-	JQMU01	2	3015	2928	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02745545	GCA_000744895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/895/GCA_000744895.1_ASM74489v1	-	HL-46
Blastomonas sp. AAP25	1523416	PRJNA255548	255548	Proteobacteria	Alphaproteobacteria	4.14501	64.2	-	LJHP01	51	3963	3847	9/22/15	4/11/17	Contig	"Institute of Microbiology, ASCR"	SAMN02925438	GCA_001295965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/965/GCA_001295965.1_ASM129596v1	-	AAP25
Achromobacter denitrificans NBRC 15125	1255278	PRJDB698	179351	Proteobacteria	Betaproteobacteria	6.70025	67.6	-	BCTQ01	98	6238	6079	2/18/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046748	GCA_001571365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/365/GCA_001571365.1_ASM157136v1	-	NBRC 15125
Methylovulum psychrotolerans	1704499	PRJNA391059	391059	Proteobacteria	Gammaproteobacteria	4.9234	50.9	chromosome:NZ_CP022129.1/CP022129.1	-	1	4465	4301	6/27/17	6/29/17	Complete Genome	University of Bergen	SAMN07256813	GCA_002209385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/385/GCA_002209385.1_ASM220938v1	-	HV10_M2
Microbacterium oxydans	82380	PRJNA269724	269724	Terrabacteria group	Actinobacteria	3.69208	68	-	JYIV01	30	3568	3485	3/19/15	4/10/17	Contig	Austrian Institute of Technology	SAMN03256326	GCA_000956405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/405/GCA_000956405.1_ASM95640v1	-	BEL163
Tetragenococcus muriaticus 3MR10-3	1302648	PRJNA192565	192565	Terrabacteria group	Firmicutes	2.07755	36	-	JPVT01	302	2052	1612	9/2/14	4/9/17	Contig	"University of Wisconsin-Madison and Suranaree University of Technology, Thailand"	SAMN02954011	GCA_000747245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/245/GCA_000747245.1_ASM74724v1	-	3MR10-3
Proteus sp. H24	1289477	PRJNA347880	347880	Proteobacteria	Gammaproteobacteria	3.86415	37.8	-	MOSG01	121	3538	3398	1/9/17	4/16/17	Contig	Wenzhou University	SAMN05898120	GCA_001939795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/795/GCA_001939795.1_ASM193979v1	-	H24
Formosa sp. Hel1_31_208	1798225	PRJEB16413	349360	FCB group	Bacteroidetes/Chlorobi group	3.09877	34.9	chromosome I:NZ_LT629733.1/LT629733.1	-	1	2799	2734	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04515667	GCA_900104785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/785/GCA_900104785.1_IMG-taxon_2634166173_annotated_assembly	-	Hel1_31_208
Neisseria sicca	490	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	2.78391	50.9	chromosome:NZ_CP020452.1/CP020452.1	-	1	2751	2406	3/29/17	4/1/17	Complete Genome	US Food and Drug Administration 	SAMN04875586	GCA_002073715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/715/GCA_002073715.1_ASM207371v1	-	FDAARGOS_260
Porphyromonas gulae	111105	PRJNA253709	253709	FCB group	Bacteroidetes/Chlorobi group	2.25288	48.8	-	JRAF01	71	1952	1806	10/27/14	4/2/17	Scaffold	UC Davis	SAMN03002873	GCA_000769475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/475/GCA_000769475.1_ASM76947v1	25858832	COT-052 OH3498
Prevotella loescheii DSM 19665 = JCM 12249 = ATCC 15930	1122985	PRJDB567	243146	FCB group	Bacteroidetes/Chlorobi group	3.47526	46.6	-	BAJB01	47	2764	1978	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00006080	GCA_000613485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/485/GCA_000613485.1_ASM61348v1	-	JCM 12249
Cellulosimicrobium cellulans F16	1350482	PRJNA209578	209578	Terrabacteria group	Actinobacteria	4.60272	74.2	-	ATNL01	14	4078	3940	8/25/15	4/11/17	Scaffold	"Dalian Institute of Chemical Physics, CAS"	SAMN04010567	GCA_001274015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/274/015/GCA_001274015.1_ASM127401v1	26347949	F16
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	4.82778	50.9	chromosome:NZ_CP010150.1/CP010150.1	-	1	4910	4623	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252425	GCA_001900375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/375/GCA_001900375.1_ASM190037v1	-	D7
Nosocomiicoccus sp. HMSC059G07	1739531	PRJNA300182	300182	Terrabacteria group	Firmicutes	1.70326	35.7	-	LTSV01	120	1757	1678	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480446	GCA_001815515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/515/GCA_001815515.1_ASM181551v1	-	HMSC059G07
Megasphaera cerevisiae DSM 20462	1122219	PRJEB19539	376333	Terrabacteria group	Firmicutes	3.1527	44.8	-	FUXD01	110	3053	2861	3/4/17	3/11/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660900	GCA_900167325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/325/GCA_900167325.1_IMG-taxon_2518645616_annotated_assembly	-	DSM 20462
Varibaculum cambriense DORA_20	1403948	PRJNA221497	221497	Terrabacteria group	Actinobacteria	2.28031	52.7	-	AZMI01	4	2025	2025	12/16/13	12/16/13	Contig	"University of California, Berkeley"	SAMN02316559	GCA_000508625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/625/GCA_000508625.1_Vbc_DORA_20_velvet_1.1	-	-
Desulfovibrio desulfuricans	876	PRJEB17767	353205	Proteobacteria	delta/epsilon subdivisions	3.23038	57.3	-	FPIW01	142	2991	2721	11/12/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910291	GCA_900119095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/095/GCA_900119095.1_IMG-taxon_2593339148_annotated_assembly	-	DSM 7057
Mycobacterium asiaticum	1790	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.20848	66.3	-	LZLM01	115	5776	5518	6/17/16	4/5/17	Contig	JCVI	SAMN04634178	GCA_001669345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/345/GCA_001669345.1_ASM166934v1	-	1276495.2
Mycobacterium neoaurum ATCC 25795	1265312	PRJNA244824	244824	Terrabacteria group	Actinobacteria	5.46838	66.7	-	JMDW01	42	5207	5097	5/15/14	4/9/17	Contig	East China University of Science and Technology	SAMN02729281	GCA_000691525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/525/GCA_000691525.1_ATCC25795_good_1_paired_assembly	-	ATCC 25795
Nitrosospira briensis	35799	PRJEB17164	351365	Proteobacteria	Betaproteobacteria	3.0595	53.7	-	FOVY01	31	2781	2659	10/31/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216332	GCA_900115325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/325/GCA_900115325.1_IMG-taxon_2671180070_annotated_assembly	-	Nsp10
Streptococcus oralis subsp. tigurinus	1077464	PRJNA280674	280674	Terrabacteria group	Firmicutes	1.79285	41.2	-	LAWI01	37	1828	1708	3/11/16	4/5/17	Contig	University of Malaya	SAMN03480682	GCA_001588695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/695/GCA_001588695.1_ASM158869v1	-	JPIBVI
Lactococcus raffinolactis NBRC 100932	1348633	PRJDB1324	231381	Terrabacteria group	Firmicutes	2.17919	39.8	-	BCVN01	114	2141	2030	2/27/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046920	GCA_001591765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/765/GCA_001591765.1_ASM159176v1	-	NBRC 100932
Acinetobacter tandoii	202954	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	4.01257	40	-	BBNK01	95	3922	3723	9/26/14	4/6/17	Contig	National Institute of Technology and Evaluation	SAMD00019897	GCA_000760555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/555/GCA_000760555.1_ASM76055v1	-	KCTC 12417
Acinetobacter beijerinckii	262668	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.59494	38.1	-	BBTL01	31	3459	3325	2/17/15	4/6/17	Contig	National Institute of Technology and Evaluation	SAMD00019872	GCA_000931715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/715/GCA_000931715.1_ASM93171v1	-	GTC 14628
Acinetobacter towneri	202956	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	2.83868	41.2	-	BBNL01	107	2761	2610	9/26/14	4/6/17	Contig	National Institute of Technology and Evaluation	SAMD00019901	GCA_000760575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/575/GCA_000760575.1_ASM76057v1	-	KCTC 12419
Acinetobacter soli NIPH 2899	1217677	PRJNA183288	183288	Proteobacteria	Gammaproteobacteria	3.46351	42.9	-	APPV01	3	3244	3097	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01087845	GCA_000368725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/725/GCA_000368725.1_Acin_soli_NIPH_2899_V1	-	NIPH 2899
Acinetobacter brisouii CIP 110357	1341683	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.08941	41.6	-	BBTI01	41	2973	2847	2/17/15	4/6/17	Contig	National Institute of Technology and Evaluation	SAMD00019874	GCA_000931655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/655/GCA_000931655.1_ASM93165v1	-	DSM 18516
Acinetobacter indicus CIP 110367	1341679	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.07897	45.5	-	BBSF01	115	2949	2783	1/23/15	4/6/17	Contig	National Institute of Technology and Evaluation	SAMD00019880	GCA_000830155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/155/GCA_000830155.1_ASM83015v1	-	DSM 25388
Acinetobacter gyllenbergii CIP 110306	1217657	PRJNA183295	183295	Proteobacteria	Gammaproteobacteria	4.30585	40.9	-	ATGG01	65	4214	4025	6/21/13	4/6/17	Contig	Broad Institute	SAMN01087841	GCA_000413855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/855/GCA_000413855.1_Acin_gyll_CIP_110306_V1	-	CIP 110306
Salinivibrio costicola subsp. vallismortis	81407	PRJNA368811	368811	Proteobacteria	Gammaproteobacteria	3.49888	49.9	-	MUFQ01	95	3213	3094	2/14/17	5/9/17	Contig	Universidad de Sevilla	SAMN06273038	GCA_001996225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/225/GCA_001996225.1_ASM199622v1	-	DSM 8285
Mycoplasma sp. CAG:877	1262907	PRJEB1025	206904	Terrabacteria group	Tenericutes	1.40883	28.4	-	CAYV01	29	1429	1408	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138560	GCA_000433455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/455/GCA_000433455.1_MGS877	-	-
Acinetobacter gerneri	202952	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	4.38411	37.7	-	BBLI01	185	4173	3944	8/28/14	4/6/17	Contig	National Institute of Technology and Evaluation	SAMD00018637	GCA_000747725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/725/GCA_000747725.1_ASM74772v1	-	KCTC 12415
Morganella psychrotolerans	368603	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.19951	48.1	-	LZEY01	61	4079	3811	6/24/16	4/13/17	Contig	FDA/CFSAN	SAMN04507558	GCA_001676225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/225/GCA_001676225.1_ASM167622v1	-	GCSL-Mp20
Hafnia paralvei ATCC 29927	1354263	PRJNA210914	210914	Proteobacteria	Gammaproteobacteria	4.82612	48.1	-	LXET01	86	4494	4338	6/2/16	4/12/17	Contig	UW-GEL (University of Wisconsin - Genome Evolution Laboratory)	SAMN04875429	GCA_001655005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/005/GCA_001655005.1_Hpa29927_DRAFTv1	-	ATCC 29927
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	5.39918	50.9	chromosome:NZ_CP010235.1/CP010235.1	-	1	5529	5216	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252454	GCA_001900945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/945/GCA_001900945.1_ASM190094v1	-	S40
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	4.83881	50.9	chromosome:NZ_CP010236.1/CP010236.1	-	1	4937	4646	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252455	GCA_001900965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/965/GCA_001900965.1_ASM190096v1	-	S42
Leucobacter sp. Ag1	1642040	PRJNA280972	280972	Terrabacteria group	Actinobacteria	3.5367	70.3	-	LAYO01	111	3341	3166	4/24/15	4/18/17	Contig	New Mexico State University	SAMN03481186	GCA_000980875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/875/GCA_000980875.1_ASM98087v1	-	Ag1
Brochothrix thermosphacta	2756	PRJNA338887	338887	Terrabacteria group	Firmicutes	2.48245	36.4	-	MDLN01	31	2394	2302	8/29/16	4/5/17	Contig	CSIRO Agriculture and Food; Food Safety and Stability Group	SAMN05567452	GCA_001715635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/635/GCA_001715635.1_ASM171563v1	-	Bth-7807
Stenotrophomonas rhizophila	216778	PRJNA375758	375758	Proteobacteria	Gammaproteobacteria	4.13478	66.9	-	NCWX01	46	3681	3585	8/29/17	8/30/17	Contig	SysMilk	SAMN06718490	GCA_002276905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/905/GCA_002276905.1_ASM227690v1	-	OG2
Pseudomonas lundensis	86185	PRJNA397499	397499	Proteobacteria	Gammaproteobacteria	4.96616	58.6	-	NQKD01	71	4638	4449	8/24/17	8/27/17	Contig	CSIRO Agriculture and Food	SAMN07459819	GCA_002269115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/115/GCA_002269115.1_ASM226911v1	-	L1822
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.8973	58.9	-	LNVY01	81	4682	4537	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339836	GCA_001681205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/205/GCA_001681205.1_ASM168120v1	-	270-3
Shigella flexneri	623	PRJEB6778	266882	Proteobacteria	Gammaproteobacteria	4.52658	50.9	chromosome 1:NZ_LM651928.1/LM651928.1	-	1	4878	4133	11/10/14	8/8/17	Complete Genome	WTSI	SAMEA2434358	GCA_000953035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/035/GCA_000953035.1_NCTC1	-	-
Lactobacillus crustorum JCM 15951	1423737	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.21951	35	-	AZDB01	101	2167	2057	11/6/15	4/11/17	Contig	Shanghai Majorbio	SAMN02369486	GCA_001434585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/585/GCA_001434585.1_ASM143458v1	26415554	JCM 15951
Shigella flexneri 2003036	1282357	PRJNA186498	186498	Proteobacteria	Gammaproteobacteria	4.59581	50.9	chromosome:NZ_CP004056.1/CP004056.1	-	1	4982	4183	8/27/14	8/4/17	Complete Genome	Institute for Communicable Disease Control and Prevention	SAMN02999960	GCA_000743955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/955/GCA_000743955.1_ASM74395v1	-	2003036
Rhodococcus qingshengii	334542	PRJNA316739	316739	Terrabacteria group	Actinobacteria	6.39951	62.5	-	LVXC01	10	6022	5876	4/19/16	4/12/17	Contig	Illinois Institute of Technology	SAMN04589880	GCA_001623435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/435/GCA_001623435.1_ASM162343v1	-	CW25
Weissella halotolerans	1615	PRJNA316556	316556	Terrabacteria group	Firmicutes	2.03469	41.3	-	LVVN01	50	-	-	4/8/16	4/8/16	Contig	Kyunghee University	SAMN04585486	GCA_001614305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/305/GCA_001614305.1_ASM161430v1	-	FBL4
Curtobacterium sp. UNCCL17	1449051	PRJNA234890	234890	Terrabacteria group	Actinobacteria	3.90829	70.8	-	JMLI01	18	3664	3563	5/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743360	GCA_000686685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/685/GCA_000686685.1_ASM68668v1	-	UNCCL17
Streptomyces rimosus subsp. rimosus	132474	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.38654	72	-	JNWX01	140	8136	7719	7/1/14	3/9/17	Contig	University of Illinois	SAMN02645202	GCA_000716515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/515/GCA_000716515.1_ASM71651v1	-	NRRL B-16073
Actinoalloteichus cyanogriseus	65497	PRJNA238534	238534	Terrabacteria group	Actinobacteria	6.3196	70.8	-	JOAL01	121	5682	4432	7/1/14	4/9/17	Scaffold	University of Illinois	SAMN02645366	GCA_000716095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/095/GCA_000716095.1_ASM71609v1	-	NRRL ISP-5103
Algoriphagus marincola HL-49	1305737	PRJNA283228	283228	FCB group	Bacteroidetes/Chlorobi group	3.80066	42.2	-	LJXT01	190	3592	3514	10/14/15	6/23/16	Scaffold	Pacific Northwest National Laboratroy	SAMN03785510	GCA_001314815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/815/GCA_001314815.1_ASM131481v1	26497460	-
Alloscardovia omnicolens	419015	PRJNA272106	272106	Terrabacteria group	Actinobacteria	1.74889	46.8	-	LRPK01	34	1497	1393	2/2/16	4/4/17	Scaffold	The Genome Institute at Washington University	SAMN03842032	GCA_001546145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/145/GCA_001546145.1_ASM154614v1	-	CMW7705A
Bifidobacterium magnum DSM 20222	1121108	PRJNA237576	237576	Terrabacteria group	Actinobacteria	1.81923	58.7	-	JDUG01	49	1560	1473	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442024	GCA_000771365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/365/GCA_000771365.1_DSM-20222	25658111	DSM 20222
Inquilinus limosus MP06	1398085	PRJNA218087	218087	Proteobacteria	Alphaproteobacteria	6.93454	69.6	-	JANX01	1186	7094	6142	10/22/14	4/9/17	Contig	"Pino M, Di Conza J, Gutkind G - Catedra de Microbiologia -Facultad de Farmacia y Bioquimica - Universidad de Buenos Aires (FFyB-UBA)"	SAMN02347468	GCA_000767795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/795/GCA_000767795.1_Ilimosus_MP06_1.0	26691451	MP06
Bifidobacterium tsurumiense DSM 17777	1121112	PRJNA237576	237576	Terrabacteria group	Actinobacteria	2.15769	52.8	-	JDTR01	45	1719	1631	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442009	GCA_000771065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/065/GCA_000771065.1_DSM-17777	25658111	DSM 17777
Lachnobacterium bovis NK4B19	877445	PRJNA185713	185713	Terrabacteria group	Firmicutes	2.5148	30.8	-	ATWB01	130	2306	2151	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02440897	GCA_000421025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/025/GCA_000421025.1_ASM42102v1	-	NK4B19
Butyrivibrio hungatei	185008	PRJEB15734	347682	Terrabacteria group	Firmicutes	3.40037	40.8	-	FMUR01	36	3123	3018	10/17/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910451	GCA_900101605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/605/GCA_900101605.1_IMG-taxon_2595698227_annotated_assembly	-	XBD2006
Butyrivibrio sp. VCB2001	1280667	PRJNA185682	185682	Terrabacteria group	Firmicutes	4.01664	43.6	-	AUIZ01	43	3584	3477	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440665	GCA_000423965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/423/965/GCA_000423965.1_ASM42396v1	-	VCB2001
Bifidobacterium pseudolongum AGR2145	1280701	PRJNA185720	185720	Terrabacteria group	Actinobacteria	1.9922	63.3	-	ATWW01	30	1681	1566	7/9/13	4/1/17	Contig	DOE Joint Genome Institute	SAMN02440890	GCA_000421365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/365/GCA_000421365.1_ASM42136v1	-	AGR2145
Pseudobutyrivibrio ruminis AD2017	1280694	PRJNA185704	185704	Terrabacteria group	Firmicutes	2.9121	38.5	-	AUJQ01	21	2620	2519	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441495	GCA_000424305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/305/GCA_000424305.1_ASM42430v1	-	AD2017
Blautia wexlerae	418240	PRJEB10915	297013	Terrabacteria group	Firmicutes	4.11144	41.6	-	CYZN01	67	3887	3634	10/1/15	4/11/17	Contig	SC	SAMEA3545329	GCA_001404755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/755/GCA_001404755.1_13470_2_82	-	2789STDY5834863
Treponema bryantii	163	PRJEB17384	351586	Spirochaetes	Spirochaetia	3.19147	40	-	FORI01	24	2822	2712	10/30/16	4/14/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487775	GCA_900113965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/965/GCA_900113965.1_IMG-taxon_2606217736_annotated_assembly	-	XBD1002
Lachnospira multipara LB2003	1410661	PRJNA223491	223491	Terrabacteria group	Firmicutes	2.5797	33.5	-	JNKW01	21	2305	2221	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841197	GCA_000702205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/205/GCA_000702205.1_ASM70220v1	-	LB2003
Natrinema altunense	222984	PRJNA271196	271196	Euryarchaeota	Halobacteria	3.7183	64.8	-	JXAN01	215	-	-	1/6/15	1/6/15	Contig	Directorate of Groundnut Research (Indian Council of Agricultural Research)	SAMN03273287	GCA_000815265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/265/GCA_000815265.1_ASM81526v1	-	1A4-DGR
Pannonibacter phragmitetus BB	1402210	PRJNA219512	219512	Proteobacteria	Alphaproteobacteria	5.07427	63.4	-	LDOP01	25	4638	4411	8/1/17	8/16/17	Scaffold	Central South University	SAMN03733601	GCA_002249885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/885/GCA_002249885.1_ASM224988v1	-	BB
Anaerovibrio lipolyticus	82374	PRJNA187036	187036	Terrabacteria group	Firmicutes	2.82853	43.3	-	JSCE01	269	2810	2551	12/17/14	4/10/17	Contig	Aberystwyth University	SAMN03142498	GCA_000803025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/025/GCA_000803025.1_Alipo1.0	23950883	5S
Halorubrum distributum	29283	PRJNA232799	232799	Euryarchaeota	Halobacteria	2.25364	66.4	-	NHPH01	1277	2812	2492	8/15/17	8/15/17	Scaffold	University of Conn.	SAMN02716037	GCA_002252935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/935/GCA_002252935.1_ASM225293v1	24782836	E8
Ensifer sp. ZNC0028	1339236	PRJNA205580	205580	Proteobacteria	Alphaproteobacteria	6.94626	62.8	-	JTLA01	307	6572	6314	12/8/14	4/10/17	Scaffold	University of Oregon	SAMN03021517	GCA_000799055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/055/GCA_000799055.1_ZNC0028.1	-	ZNC0028
Lysobacter sp. Root604	1736568	PRJNA297942	297942	Proteobacteria	Gammaproteobacteria	4.78412	68.4	-	LMGS01	16	4263	4116	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155837	GCA_001427505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/505/GCA_001427505.1_Root604	26633631	Root604
Lysobacter antibioticus HS124	1286308	PRJEB1345	187422	Proteobacteria	Gammaproteobacteria	5.14403	69	-	CAQP01	183	4450	4251	1/31/13	8/28/17	Scaffold	OSU/OARDC	SAMEA2272122	GCA_000336385.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/385/GCA_000336385.3_HS124_Split10plusN	-	HS124
Haloarcula sp. CBA1127	1765055	PRJDB4415	305503	Euryarchaeota	Halobacteria	4.35926	61	-	BCNB01	9	4319	4130	12/19/15	3/22/17	Contig	Korea Basic Science Institute	SAMD00043971	GCA_001485575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/575/GCA_001485575.1_ASM148557v1	-	CBA1127
Streptomyces albulus CCRC 11814	1316445	PRJNA196135	196135	Terrabacteria group	Actinobacteria	9.30437	72.2	-	AROY02	242	8185	7747	5/31/13	3/9/17	Contig	University of the Witwatersrand	SAMN02471960	GCA_000403765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/765/GCA_000403765.2_SAlb2	24009124	CCRC 11814
Micrococcus sp. MS-ASIII-49	1593237	PRJNA271945	271945	Terrabacteria group	Actinobacteria	2.44073	73.1	-	JXSP01	185	2285	2098	3/4/15	4/10/17	Contig	UFMG	SAMN03280120	GCA_000946635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/635/GCA_000946635.1_ASM94663v1	25883272	MS-AsIII-49
Brevibacillus borstelensis cifa_chp40	1429889	PRJNA229942	229942	Terrabacteria group	Firmicutes	5.19658	51.9	-	JPRB01	38	5142	4961	8/8/14	4/9/17	Contig	CIFA	SAMN02420592	GCA_000738785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/785/GCA_000738785.1_ASM73878v1	26958091	cifa_chp40
Shigella flexneri Shi06HN006	1282358	PRJNA186503	186503	Proteobacteria	Gammaproteobacteria	4.6209	50.9	chromosome:NZ_CP004057.1/CP004057.1	-	1	5020	4214	8/27/14	8/4/17	Complete Genome	Institute for Communicable Disease Control and Prevention	SAMN02999961	GCA_000743995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/995/GCA_000743995.1_ASM74399v1	-	Shi06HN006
Staphylococcus pasteuri	45972	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.00265	30.6	-	JUOB01	141	1766	1689	7/10/15	4/10/17	Contig	University of Washington	SAMN03198126	GCA_001075645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/645/GCA_001075645.1_ASM107564v1	26230489	915_SPAS
Chania multitudinisentens RB-25	1441930	PRJNA232738	232738	Proteobacteria	Gammaproteobacteria	5.48818	50.9	chromosome:NZ_CP007044.2/CP007044.2	-	1	4982	4746	1/14/14	4/10/17	Complete Genome	UNIVERSITY OF MALAYA	SAMN02569064	GCA_000520015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/015/GCA_000520015.2_ASM52001v2	-	RB-25
Paracoccus pantotrophus	82367	PRJEB17165	351364	Proteobacteria	Alphaproteobacteria	4.21799	67.7	-	FOWA01	127	4172	3896	11/1/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04244567	GCA_900115335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/335/GCA_900115335.1_IMG-taxon_2597490335_annotated_assembly	-	DSM 11073
Streptomyces lavendulae subsp. lavendulae	58340	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.35418	72.4	-	JOBU01	119	7583	7296	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645401	GCA_000718705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/705/GCA_000718705.1_ASM71870v1	-	NRRL WC-3542
Streptomyces violaceoruber	1935	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.5304	70.5	-	JODI01	351	9570	8731	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645441	GCA_000720805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/805/GCA_000720805.1_ASM72080v1	-	NRRL S-981
Escherichia coli LY180	1335916	PRJNA203308	203308	Proteobacteria	Gammaproteobacteria	4.8356	50.9	chromosome:NC_022364.1/CP006584.1	-	1	4974	4657	9/18/13	2/22/17	Complete Genome	University of Florida	SAMN02604176	GCA_000468515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/515/GCA_000468515.1_ASM46851v1	25063650	LY180
Magnetospirillum sp. 15-1	1979370	PRJEB20642	390604	Proteobacteria	Alphaproteobacteria	5.42252	65.6	-	FXXN01	28	-	-	6/15/17	6/15/17	Contig	HELMHOLTZ CENTRE FOR ENVIRONMENTAL RESEARCH - UFZ	SAMEA104035115	GCA_900184795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/184/795/GCA_900184795.1_Meyer_15_1	-	15-1
Planococcus sp. CAU13	1541197	PRJNA260010	260010	Terrabacteria group	Firmicutes	3.31089	46.3	-	JRGN01	355	3329	3240	11/12/14	4/9/17	Contig	Indiana University Southeast	SAMN03014939	GCA_000775575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/575/GCA_000775575.1_ASM77557v1	25540335	CAU13
Pseudonocardia autotrophica	2074	PRJNA341445	341445	Terrabacteria group	Actinobacteria	7.35166	73	-	MIGB01	117	6903	6616	5/8/17	5/10/17	Contig	Fraunhofer Institute for Interfacial Engineering and Biotechnolgy IGB	SAMN05722966	GCA_002119215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/215/GCA_002119215.1_ASM211921v1	-	DSM 535
Brachyspira hampsonii	1287055	PRJNA324559	324559	Spirochaetes	Spirochaetia	2.969	27.5	-	LZOG01	178	2601	2446	9/25/16	4/13/17	Contig	University of Minnesota	SAMN05209829	GCA_001746215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/215/GCA_001746215.1_ASM174621v1	-	NSH-24
Streptomyces canus	58343	PRJNA306875	306875	Terrabacteria group	Actinobacteria	7.79507	72	-	LQCG01	64	7198	6831	1/19/16	3/12/17	Contig	McMaster University	SAMN04365298	GCA_001517125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/125/GCA_001517125.1_ASM151712v1	27013049	C-509
Leifsonia sp. 157MF	1798222	PRJEB15999	348273	Terrabacteria group	Actinobacteria	4.14165	69.8	chromosome I:NZ_LT629698.1/LT629698.1	-	1	3981	3906	10/20/16	7/28/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04515683	GCA_900100405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/405/GCA_900100405.1_IMG-taxon_2642422515_annotated_assembly	-	157MF
Escherichia coli P12b	910348	PRJNA59455	59455	Proteobacteria	Gammaproteobacteria	4.93529	50.9	chromosome:NC_017663.1/CP002291.1	-	1	5186	4584	4/2/12	3/5/17	Complete Genome	"TEDA School of Biological Sciences and Biotechnology, Nankai University"	SAMN02603904	GCA_000257275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/275/GCA_000257275.1_ASM25727v1	22287625	P12b
Pseudomonas poae	200451	PRJNA389237	389237	Proteobacteria	Gammaproteobacteria	6.15438	60.2	-	NIFJ01	119	5694	5459	6/22/17	8/21/17	Scaffold	University Of Reading	SAMN07192729	GCA_002238255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/255/GCA_002238255.1_ASM223825v1	-	PpR24
Pseudomonas cannabina pv. alisalensis str. PSa866	1290997	PRJNA188667	188667	Proteobacteria	Gammaproteobacteria	5.30538	59	-	AOSY01	66	-	-	6/15/17	6/15/17	Contig	"department of Crop Science, Technological Educational Institute of Crete"	SAMN07248206	GCA_002208585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/585/GCA_002208585.1_ASM220858v1	-	PSa866
Aerococcus urinaeequi DSM 20341 = CCUG 28094	1120952	PRJNA188799	188799	Terrabacteria group	Firmicutes	1.99213	39.3	-	AULC01	9	1850	1769	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440813	GCA_000425085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/085/GCA_000425085.1_ASM42508v1	-	DSM 20341
Prevotella corporis DSM 18810 = JCM 8529	1122981	PRJDB559	243140	FCB group	Bacteroidetes/Chlorobi group	2.77843	44.2	-	BAIT01	159	2456	1889	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00015865	GCA_000613365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/365/GCA_000613365.1_ASM61336v1	-	JCM 8529
Bifidobacterium minimum DSM 20102	1121109	PRJNA237576	237576	Terrabacteria group	Actinobacteria	1.86381	62.7	-	JDUA01	76	1537	1435	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442018	GCA_000771245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/245/GCA_000771245.1_DSM-20102	25658111	DSM 20102
Brevundimonas naejangsanensis	588932	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.04685	67	-	DELH01	65	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06454559	GCA_002354315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/315/GCA_002354315.1_ASM235431v1	28894102	-
Halorubrum ezzemoulense	337243	PRJNA232799	232799	Euryarchaeota	Halobacteria	3.34623	67.8	-	NHPA01	83	3425	2886	8/15/17	8/17/17	Contig	University of Conn.	SAMN02716044	GCA_002252815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/815/GCA_002252815.1_ASM225281v1	24782836	Ga2p
Rathayibacter toxicus DSM 7488	1123052	PRJNA188887	188887	Terrabacteria group	Actinobacteria	2.29969	61.5	-	AUDF01	29	2122	2021	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440627	GCA_000425325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/325/GCA_000425325.1_ASM42532v1	-	DSM 7488
Lactobacillus harbinensis	304207	PRJNA296754	296754	Terrabacteria group	Firmicutes	2.83358	53.6	-	LTDZ01	295	2759	2532	5/2/16	4/12/17	Scaffold	South China University of Technology	SAMN04103126	GCA_001636165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/165/GCA_001636165.1_ASM163616v1	-	BM-LH14723
Treponema pedis isoE1186	1291001	PRJNA188677	188677	Spirochaetes	Spirochaetia	3.18716	37	-	AOTP01	771	2974	2563	9/6/13	4/2/17	Contig	Swedish University of Agricultural Sciences	SAMN02379487	GCA_000465035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/035/GCA_000465035.1_Treponema_pedis_isoE1186	23977007	isoE1186
Dietzia sp. 111N12-1	1785156	PRJNA309628	309628	Terrabacteria group	Actinobacteria	3.77672	70.2	-	LSSV01	114	3526	3356	6/6/16	4/12/17	Contig	"Third Institute of Oceanography, State Oceanic Administration"	SAMN04437166	GCA_001658045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/045/GCA_001658045.1_ASM165804v1	-	111N12-1
Kocuria sp. Marseille-P3598	1926282	PRJEB20004	379407	Terrabacteria group	Actinobacteria	2.42837	61	-	FWFC01	4	2189	2105	3/24/17	5/1/17	Scaffold	URMITE	SAMEA103911225	GCA_900169715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/715/GCA_900169715.1_PRJEB20004	-	Marseille-P3598
Desulfobulbus sp. oral taxon 041 str. Dsb2	1292047	PRJNA188737	188737	Proteobacteria	delta/epsilon subdivisions	0.676885	57.6	-	APBP01	162	-	-	3/27/13	7/29/15	Contig	Oak Ridge National Laboratory	SAMN02470751	GCA_000349365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/365/GCA_000349365.1_Dsb2	23555659	Dsb2
Borrelia miyamotoi	47466	PRJNA310783	310783	Spirochaetes	Spirochaetia	1.2779	28.6598	chromosome:NZ_CP017126.1/CP017126.1; plasmid cp1:NZ_CP017127.1/CP017127.1; plasmid cp2:NZ_CP017128.1/CP017128.1; plasmid cp3:NZ_CP017129.1/CP017129.1; plasmid cp4:NZ_CP017130.1/CP017130.1; plasmid cp5:NZ_CP017131.1/CP017131.1; plasmid lp19:NZ_CP017132.1/CP017132.1; plasmid lp20-1:NZ_CP017133.1/CP017133.1; plasmid lp20-2:NZ_CP017134.1/CP017134.1; plasmid lp23:NZ_CP017135.1/CP017135.1; plasmid lp26:NZ_CP017136.1/CP017136.1; plasmid lp30:NZ_CP017137.1/CP017137.1; plasmid lp41:NZ_CP017138.1/CP017138.1; plasmid lp6:NZ_CP017139.1/CP017139.1; plasmid lp72:NZ_CP017140.1/CP017140.1	-	15	1219	1096	10/18/16	4/17/17	Chromosome	Centers for Disease Control and Prevention	SAMN04455594	GCA_001767415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/415/GCA_001767415.1_ASM176741v1	-	CT13-2396
Pseudomonas denitrificans (nomen rejiciendum)	43306	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.37812	66.4	-	JWEK01	269	6174	5847	7/10/15	5/24/17	Scaffold	University of Washington	SAMN03197024	GCA_001060205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/205/GCA_001060205.1_ASM106020v1	26230489	106_PDEN
Cryptobacterium curtum DSM 15641	469378	PRJNA20739	20739	Terrabacteria group	Actinobacteria	1.6178	50.9	chromosome:NC_013170.1/CP001682.1	-	1	1405	1337	8/26/09	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598434	GCA_000023845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/845/GCA_000023845.1_ASM2384v1	21304644	DSM 15641
Caldicellulosiruptor sp. Rt8.B8	1387555	PRJNA215342	215342	Terrabacteria group	Firmicutes	2.48848	36.5	-	LACO01	2	2373	2160	3/17/15	4/10/17	Contig	DOE Joint Genome Institute	SAMN02745018	GCA_000955745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/955/745/GCA_000955745.1_ASM95574v1	25977428	Rt8.B8
Gluconobacter thailandicus F149-1 = NBRC 100600	1231357	PRJDB503	174854	Proteobacteria	Alphaproteobacteria	3.4376	56.2	-	BANH01	191	3194	3040	3/20/15	4/10/17	Contig	Kinki University	SAMD00036643	GCA_000964465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/465/GCA_000964465.1_ASM96446v1	-	F149-1
Comamonas sp. SCN 65-56	1660095	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	3.59825	65.2	-	MEDS01	51	3453	3297	9/13/16	9/13/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03652438	GCA_001724135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/135/GCA_001724135.1_ASM172413v1	26031303	-
Bifidobacterium thermophilum DSM 20212	1410648	PRJNA223494	223494	Terrabacteria group	Actinobacteria	2.25235	60.1	-	JHWM01	50	1738	1626	4/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743878	GCA_000687575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/575/GCA_000687575.1_ASM68757v1	-	DSM 20212
Marinobacter excellens HL-55	1305731	PRJNA283228	283228	Proteobacteria	Gammaproteobacteria	3.78266	56.3	-	LJZQ01	55	3547	3499	10/14/15	6/23/16	Scaffold	Pacific Northwest National Laboratroy	SAMN03785511	GCA_001314845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/845/GCA_001314845.1_ASM131484v1	26497460	-
Lactobacillus pobuzihii E100301 = KCTC 13174	1242253	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.32362	37.7	-	AZCL01	91	2167	2065	11/6/15	4/11/17	Contig	Shanghai Majorbio	SAMN02369471	GCA_001433815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/815/GCA_001433815.1_ASM143381v1	26415554	KCTC 13174
Pseudomonas veronii 1YB2	1436001	PRJNA231563	231563	Proteobacteria	Gammaproteobacteria	7.64907	60.3	-	JGYI01	115	7159	6794	4/30/15	4/10/17	Contig	Bacterial Abiotic Stress and Survival Improvement Network	SAMN02692653	GCA_000982395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/395/GCA_000982395.1_P.veronii1YB2v1.0	26475106	1YB2
Nitrosospira sp. Nl5	200120	PRJEB15853	347790	Proteobacteria	Betaproteobacteria	3.03208	53.7	-	FMVQ01	34	2842	2733	10/17/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216420	GCA_900102495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/495/GCA_900102495.1_IMG-taxon_2671180042_annotated_assembly	-	Nl5
Streptomyces mirabilis	68239	PRJEB17260	351491	Terrabacteria group	Actinobacteria	11.5553	70.2	-	FONR01	91	10592	9625	10/31/16	3/14/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02787118	GCA_900112965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/965/GCA_900112965.1_IMG-taxon_2616644814_annotated_assembly	-	OK461
Bacillus flexus T6186-2	1444310	PRJNA233555	233555	Terrabacteria group	Firmicutes	4.25425	37.5	-	JANV01	206	4428	4239	4/2/14	4/9/17	Contig	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN02585215	GCA_000612165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/165/GCA_000612165.1_BacFle1.0	25301038	T6186-2
Bifidobacterium subtile DSM 20096	1121110	PRJNA237576	237576	Terrabacteria group	Actinobacteria	2.762	60.9	-	JDTX01	75	2264	2129	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442015	GCA_000771185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/185/GCA_000771185.1_DSM-20096	25658111	DSM 20096
Bifidobacterium choerinum DSM 20434	1121107	PRJNA237576	237576	Terrabacteria group	Actinobacteria	2.04994	65.7	-	JDUJ01	143	1675	1536	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442027	GCA_000771425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/425/GCA_000771425.1_DSM-20434	25658111	DSM 20434
Sporosarcina sp. EUR3 2.2.2	1305836	PRJNA195884	195884	Terrabacteria group	Firmicutes	3.47965	37.6	-	AXVE01	19	3408	3302	10/25/13	4/9/17	Contig	DOE Joint Genome Institute	SAMN02441110	GCA_000484595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/595/GCA_000484595.1_ASM48459v1	-	EUR3 2.2.2
Plesiomonas shigelloides	703	PRJNA371299	371299	Proteobacteria	Gammaproteobacteria	3.86606	51.6	-	MUNJ01	51	3444	3286	4/17/17	4/21/17	Scaffold	Hubei University	SAMN06297742	GCA_002093895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/895/GCA_002093895.1_ASM209389v1	-	LS1
Phaeobacter sp. 11ANDIMAR09	1225647	PRJNA293018	293018	Proteobacteria	Alphaproteobacteria	4.70983	58.2	-	LIKT01	101	4469	4339	9/18/15	4/16/17	Contig	Univesitat de les Illes Balears (UIB)	SAMN03996103	GCA_001294455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/455/GCA_001294455.1_Phaeobacter_sp._11ANDIMAR09	-	11ANDIMAR09
Bacillus firmus NBRC 15306	1314753	PRJDB1083	196456	Terrabacteria group	Firmicutes	4.421	41.7	-	BCUY01	254	4486	4170	2/27/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046995	GCA_001591465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/465/GCA_001591465.1_ASM159146v1	-	NBRC 15306
Aurantimonas sp. USBA 369	1881059	PRJEB19570	376353	Proteobacteria	Alphaproteobacteria	4.65208	64.4	-	FUXL01	33	4352	4196	3/4/17	3/10/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05428963	GCA_900167365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/365/GCA_900167365.1_IMG-taxon_2657245368_annotated_assembly	-	USBA 369
Stappia sp. TSB10P1A	2003585	PRJEB20985	395444	Proteobacteria	Alphaproteobacteria	5.1355	67.7	-	FYAU01	65	-	-	7/22/17	7/22/17	Contig	Griffith University	SAMEA104113277	GCA_900185725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/725/GCA_900185725.1_TSB10P1A_Assembly_1	-	-
Butyricicoccus sp. N54.MGS-46	1828556	PRJNA312222	312222	Terrabacteria group	Firmicutes	1.45227	55	-	LWLJ01	15	-	-	5/13/16	5/13/16	Scaffold	Mayo Clinic	SAMN04859492	GCA_001643435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/435/GCA_001643435.1_ASM164343v1	-	-
Variovorax boronicumulans	436515	PRJNA297619	297619	Proteobacteria	Betaproteobacteria	6.7752	68.3	-	LUJJ01	46	6256	6112	10/4/16	4/13/17	Contig	Nagaoka University of Technology	SAMN04126843	GCA_001752345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/345/GCA_001752345.1_ASM175234v1	-	PHE5-1
Maritimibacter sp. REDSEA-S40_B3	1811548	PRJNA289734	289734	Proteobacteria	Alphaproteobacteria	3.86819	64.3	-	LUOP01	28	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534591	GCA_001626915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/915/GCA_001626915.1_ASM162691v1	27377622	-
Helicobacter sp. MIT 03-1616	1548148	PRJNA261711	261711	Proteobacteria	delta/epsilon subdivisions	1.91033	38.8	-	JROY01	176	1927	1745	10/10/14	4/9/17	Contig	Massachusetts Institute of Technology	SAMN03075557	GCA_000765685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/685/GCA_000765685.1_ASM76568v1	25428971	MIT 03-1616
Lactobacillus ingluviei	148604	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.12643	50	-	JQBA01	111	2058	1907	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02797772	GCA_001437235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/235/GCA_001437235.1_ASM143723v1	26415554	DSM 14792
Dyella japonica A8	1217721	PRJNA171725	171725	Proteobacteria	Gammaproteobacteria	4.76924	65	-	ALOY01	184	4164	4047	8/20/12	5/18/17	Contig	University of Malaya	SAMN02471866	GCA_000292265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/265/GCA_000292265.1_ASM29226v1	23105069	A8
Mycoplasma meleagridis	29561	PRJNA299872	299872	Terrabacteria group	Tenericutes	0.647259	25.9	-	LOHQ01	9	572	510	1/5/16	4/11/17	Scaffold	University of Turin (UNITO)	SAMN04216960	GCA_001484825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/825/GCA_001484825.1_Mmel2011	26941131	IZSVE/2944/9/2011
Mitsuokella sp. UBA4225	1946958	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.79131	58.5	-	DGXT01	15	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455666	GCA_002395685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/685/GCA_002395685.1_ASM239568v1	28894102	-
Chryseobacterium oranimense	421058	PRJEB18227	355491	FCB group	Bacteroidetes/Chlorobi group	4.59834	37.9	-	FQWT01	16	4299	4187	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421866	GCA_900129755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/755/GCA_900129755.1_IMG-taxon_2684623028_annotated_assembly	-	DSM 19055
Teredinibacter turnerae T7901	377629	PRJNA30839	30839	Proteobacteria	Gammaproteobacteria	5.19316	50.9	chromosome:NC_012997.1/CP001614.2	-	1	4274	4149	5/18/09	5/19/17	Complete Genome	J. Craig Venter Institute	SAMN02603454	GCA_000023025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/025/GCA_000023025.1_ASM2302v1	19568419	T7901
Microbispora sp. NRRL B-24597	1463823	PRJNA238534	238534	Terrabacteria group	Actinobacteria	5.74884	64.5	-	JOAF01	44	5326	5170	7/2/14	4/9/17	Contig	University of Illinois	SAMN02645360	GCA_000718545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/545/GCA_000718545.1_ASM71854v1	-	NRRL B-24597
Faecalibacterium sp. An121	1965550	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.71315	61.1	-	NFLM01	62	2535	2394	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473594	GCA_002160915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/915/GCA_002160915.1_ASM216091v1	-	An121
Serratia fonticola AU-P3(3)	1332070	PRJNA202229	202229	Proteobacteria	Gammaproteobacteria	5.02313	53.8	-	ASZB01	44	4745	4552	9/16/13	4/2/17	Contig	Institute of Microbial Technology	SAMN02469999	GCA_000468075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/075/GCA_000468075.1_Serratia_fanticola_AU-P3_3_	24233592	AU-P3(3)
Vibrio owensii	696485	PRJDB3254	269697	Proteobacteria	Gammaproteobacteria	6.0065	45.5	-	BBPJ01	51	5562	5349	12/6/14	4/3/17	Scaffold	"Dept. of Microbiology, Tzu-Chi University"	SAMD00022561	GCA_000829735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/735/GCA_000829735.1_ASM82973v1	25593265	GRA50-12
Paenibacillus durus ATCC 35681	1333534	PRJNA202846	202846	Terrabacteria group	Firmicutes	5.36091	50.8	-	ASQQ01	821	5349	4735	1/15/14	4/9/17	Contig	China Agricultural University	SAMN02597334	GCA_000520635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/635/GCA_000520635.1_s1	-	ATCC 35681
Bifidobacterium thermacidophilum subsp. thermacidophilum	79262	PRJNA239869	239869	Terrabacteria group	Actinobacteria	2.23307	60.4	-	JGZT01	8	1752	1614	8/18/14	4/9/17	Contig	University of Parma	SAMN02673457	GCA_000741455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/455/GCA_000741455.1_Bifthe_sub.the	"2,508,549,325,107,960"	LMG 21395
Paenarthrobacter nicotinovorans	29320	PRJDB4758	321405	Terrabacteria group	Actinobacteria	4.81217	62.5	-	BDDW01	101	4478	4298	5/11/16	4/12/17	Scaffold	"Shandong University,  HaoLiang"	SAMD00051130	GCA_001662445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/445/GCA_001662445.1_ASM166244v1	-	Hce-1
Morganella sp. GLFB	1326758	PRJNA196462	196462	Proteobacteria	Gammaproteobacteria	3.94031	51	-	ARZC01	3772	-	-	5/14/13	11/6/13	Contig	Altogen Labs	SAMN02393804	GCA_000392395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/395/GCA_000392395.1_Cofactor	-	GLFB
Burkholderia contaminans LMG 23361	1334628	PRJNA203156	203156	Proteobacteria	Betaproteobacteria	9.26324	65.9	-	LASD01	18	8591	8136	5/1/15	4/10/17	Contig	University of Manitoba	SAMN02402687	GCA_000987075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/987/075/GCA_000987075.1_ASM98707v1	26251482	LMG 23361
Thermoanaerobacter thermocopriae	29350	PRJNA278302	278302	Terrabacteria group	Firmicutes	2.11131	34.1	-	LGEO01	105	2217	2217	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445112	GCA_001508735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/735/GCA_001508735.1_ASM150873v1	26787827	-
Aquitalea magnusonii	332411	PRJDB5811	391586	Proteobacteria	Betaproteobacteria	4.7506	59.4	-	BDST01	73	4503	4349	6/22/17	7/24/17	Scaffold	"Bio-Environmental Engineering Lab, Department of Sustainable Energy and environmental Engineering, Graduate School of Engineering, Osaka university"	SAMD00080950	GCA_002217795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/795/GCA_002217795.1_ASM221779v1	28293292	H3
Listeria fleischmannii FSL S10-1203	1265822	PRJNA182531	182531	Terrabacteria group	Firmicutes	3.18779	38.4	-	AODM01	126	3395	2250	1/31/14	2/26/17	Contig	Cornell University	SAMN02671261	GCA_000526015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/015/GCA_000526015.1_LfleischmanniiFL	-	FSL S10-1203
Lactobacillus parabrevis ATCC 53295	1267003	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.61421	49	-	AZCZ01	133	2415	2300	11/6/15	4/11/17	Contig	Shanghai Majorbio	SAMN02369467	GCA_001434055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/055/GCA_001434055.1_ASM143405v1	26415554	ATCC 53295
Lactobacillus otakiensis DSM 19908 = JCM 15040	1423780	PRJDB775	243687	Terrabacteria group	Firmicutes	2.34214	42.3	-	BBAT01	20	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000446	GCA_001311395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/395/GCA_001311395.1_ASM131139v1	-	JCM 15040
Roseburia sp. CAG:50	1262949	PRJEB907	206930	Terrabacteria group	Firmicutes	2.85502	43.4	-	CBAK01	136	2508	2482	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138521	GCA_000432675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/675/GCA_000432675.1_MGS50	-	-
Methanoculleus sp. CAG:1088	1262903	PRJEB687	206656	Euryarchaeota	Methanomicrobia	1.633	55.8	-	CBKQ01	32	1673	1625	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138776	GCA_000437835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/835/GCA_000437835.1_MGS1088	-	-
Dialister sp. CAG:588	1262871	PRJEB946	206833	Terrabacteria group	Firmicutes	1.24562	35.2	-	CBKO01	70	1207	1171	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138801	GCA_000438335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/335/GCA_000438335.1_MGS588	-	-
Sutterella sp. CAG:521	1262977	PRJEB916	206714	Proteobacteria	Betaproteobacteria	1.8298	46.9	-	CBJP01	76	1679	1632	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138766	GCA_000437635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/635/GCA_000437635.1_MGS521	-	-
Clostridium paraputrificum	29363	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.67143	29.8	-	CZBQ01	580	3358	3225	10/1/15	4/11/17	Contig	SC	SAMEA3545418	GCA_001406515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/515/GCA_001406515.1_14207_7_78	-	2789STDY5834955
Clostridium autoethanogenum DSM 10061	1341692	PRJNA206564	206564	Terrabacteria group	Firmicutes	4.32331	31	-	ASZX01	100	4026	3821	7/15/13	4/8/17	Contig	North Carolina State University	SAMN02470703	GCA_000427255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/255/GCA_000427255.1_ASM42725v1	23950130	DSM 10061
Brachyspira sp. CAG:700	1262760	PRJEB982	206720	Spirochaetes	Spirochaetia	2.4584	28.2	-	CAYT01	214	2316	2280	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138467	GCA_000431595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/595/GCA_000431595.1_MGS700	-	-
Succinatimonas sp. UBA1264	1947567	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	1.22424	40.1	-	DBVM01	111	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457614	GCA_002308175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/175/GCA_002308175.1_ASM230817v1	28894102	-
Acetobacter sp. DsW_54	1670660	PRJNA253128	253128	Proteobacteria	Alphaproteobacteria	2.71565	58.3	-	JOPD01	76	2527	2411	5/19/17	5/24/17	Contig	Cornell University	SAMN02866232	GCA_002153575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/575/GCA_002153575.1_ASM215357v1	-	DsW_54
Chthonomonas calidirosea	454171	PRJEB4907	300970	Terrabacteria group	Armatimonadetes	3.43828	54.6	-	CDLF01	1	2885	2776	11/3/15	4/11/17	Scaffold	GNS	SAMEA2248198	GCA_001457975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/975/GCA_001457975.1_P488	-	P488
Odoribacter sp. N54.MGS-14	1637510	PRJNA277012	277012	FCB group	Bacteroidetes/Chlorobi group	3.45695	43.5	-	LARL01	209	-	-	4/24/15	6/10/15	Scaffold	The Mayo Clinic	SAMN03450006	GCA_000980295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/295/GCA_000980295.1_ASM98029v1	26021920	-
Escherichia coli ATCC 8739	481805	PRJNA18083	18083	Proteobacteria	Gammaproteobacteria	4.74622	50.9	chromosome:NC_010468.1/CP000946.1	-	1	4827	4494	3/11/08	2/22/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598405	GCA_000019385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/385/GCA_000019385.1_ASM1938v1	-	ATCC 8739
Sphingobium baderi LL03	1114964	PRJNA202090	202090	Proteobacteria	Alphaproteobacteria	4.84829	63.6	-	ATIB01	92	4814	4530	8/9/13	4/8/17	Contig	University of Delhi	SAMN02471716	GCA_000445145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/145/GCA_000445145.1_ASM44514v1	24051322	LL03
Corynebacterium argentoratense	42817	PRJNA277060	277060	Terrabacteria group	Actinobacteria	2.01482	58.9	-	JZFA01	112	1890	1678	4/15/15	4/10/17	Contig	AC-Gen Reading Life	SAMN03383978	GCA_000971875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/875/GCA_000971875.1_c.arg_CNM601_08_1.0	26159536	CNM 601/08
Shigella flexneri 5 str. 8401	373384	PRJNA16375	16375	Proteobacteria	Gammaproteobacteria	4.57428	50.9	chromosome:NC_008258.1/CP000266.1	-	1	4916	4166	7/21/06	8/4/17	Complete Genome	Microbial Genome Center of ChMPH	SAMN02603604	GCA_000013585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/585/GCA_000013585.1_ASM1358v1	16822325	8401
Cellulophaga baltica 4	1348582	PRJNA208989	208989	FCB group	Bacteroidetes/Chlorobi group	4.6136	34.6	-	ATLG01	42	3982	3771	9/18/13	4/9/17	Contig	University of Arizona	SAMN02208947	GCA_000468575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/575/GCA_000468575.1_Cbal4_1.0	24428166	4
Rhizobium pusense	648995	PRJNA355338	355338	Proteobacteria	Alphaproteobacteria	5.27132	59.2	-	MRDJ01	29	5129	4937	2/28/17	3/2/17	Scaffold	"Northeast institute of Geography and Agroecology, Chinese Academy of Sciences"	SAMN06074345	GCA_002008275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/008/275/GCA_002008275.1_ASM200827v1	-	NRCPB10
Olleya sp. ITB9	1715648	PRJDB4233	297421	FCB group	Bacteroidetes/Chlorobi group	3.38472	31.2	-	BCBW01	58	3060	2980	9/29/15	4/11/17	Contig	Tokyo University of Marine Science and Technology	SAMD00041295	GCA_001315805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/805/GCA_001315805.1_ASM131580v1	-	ITB9
Shigella flexneri 2a str. 2457T	198215	PRJNA408	408	Proteobacteria	Gammaproteobacteria	4.59935	50.9	chromosome:NC_004741.1/AE014073.1	-	1	4958	4165	4/22/03	8/4/17	Complete Genome	Univ. Wisconsin	SAMN02604096	GCA_000007405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/405/GCA_000007405.1_ASM740v1	12704152	2457T
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	4.82658	50.8905	chromosome:NZ_CP010160.1/CP010160.1; plasmid A:NZ_CP010161.1/CP010161.1; plasmid B:NZ_CP010162.1/CP010162.1	-	3	4994	4557	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252429	GCA_001900775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/775/GCA_001900775.1_ASM190077v1	-	H1
Thermofilum sp. ex4484_82	2012528	PRJNA362212	362212	TACK group	Crenarchaeota	1.75067	37.1	-	NJDJ01	157	2011	1911	8/16/17	8/16/17	Contig	The University of Texas at Austin	SAMN06647979	GCA_002254905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/905/GCA_002254905.1_ASM225490v1	-	-
Vibrio albensis	140100	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.03603	47.6	-	LOSL01	2	3776	3431	12/21/15	4/11/17	Contig	US Food and Drug Administration 	SAMN03996320	GCA_001471585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/585/GCA_001471585.1_ASM147158v1	-	ATCC 14547
Leeuwenhoekiella sp. UBA1003	1946744	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.45441	40.5	-	DBAT01	84	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455467	GCA_002291795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/795/GCA_002291795.1_ASM229179v1	28894102	-
Planktothrix prolifica NIVA-CYA 98	329562	PRJNA213369	213369	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.73737	39.7	-	AVFZ01	4	5093	4768	9/6/13	4/9/17	Scaffold	University of Oslo	SAMN00001876	GCA_000464845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/845/GCA_000464845.1_NC98_2	23995927	NIVA-CYA 98
Exiguobacterium undae	169177	PRJNA316179	316179	Terrabacteria group	Firmicutes	3.26186	47.7	-	LVVL01	21	3333	3251	5/24/16	4/12/17	Contig	Korea Research Institute Bioscience and Biotechnology	SAMN04577803	GCA_001650325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/325/GCA_001650325.1_ASM165032v1	-	KCTC 3810
Desulfococcus multivorans DSM 2059	1121405	PRJNA208569	208569	Proteobacteria	delta/epsilon subdivisions	4.40301	56.9	-	ATHJ01	149	3883	3750	7/11/13	4/8/17	Contig	Oak Ridge National Lab	SAMN02207450	GCA_000422185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/185/GCA_000422185.1_D_multivorans_DSM2059_v1.0	23950126	DSM 2059
Herpetosiphon aurantiacus DSM 785	316274	PRJNA16523	16523	Terrabacteria group	Chloroflexi	6.78543	50.8853	chromosome:CP000875.1; plasmid pHAU01:CP000876.1; plasmid pHAU02:CP000877.1	-	3	5363	5278	11/13/07	12/11/13	Complete Genome	US DOE Joint Genome Institute	SAMN00623048	GCA_000018565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/565/GCA_000018565.1_ASM1856v1	-	-
Pantoea dispersa	59814	PRJNA278432	278432	Proteobacteria	Gammaproteobacteria	4.90522	57.6	-	LDSE01	83	4565	4395	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401407	GCA_001476325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/325/GCA_001476325.1_ASM147632v1	26793183	SA3
Franconibacter pulveris 601	1406823	PRJNA222260	222260	Proteobacteria	Gammaproteobacteria	4.70862	56.6	-	AXSY01	252	4582	4260	10/29/13	4/9/17	Contig	"OARSA, CFSAN"	SAMN02369274	GCA_000485985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/985/GCA_000485985.1_Epul601	24309737	601
Pseudomonas mosselii DSM 17497	1403339	PRJNA221051	221051	Proteobacteria	Gammaproteobacteria	6.26084	64	-	JHYW01	55	5916	5679	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743979	GCA_000621225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/225/GCA_000621225.1_ASM62122v1	-	DSM 17497
Yersinia similis	367190	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.86771	46.9	-	CQBK01	149	4565	4171	3/23/15	4/10/17	Scaffold	SC	SAMEA859913	GCA_001114105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/105/GCA_001114105.1_5139_1_4	-	Y233
Escherichia coli	562	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	4.98958	50.8849	chromosome:NZ_CP015240.1/CP015240.1; plasmid unnamed1:NZ_CP015239.1/CP015239.1	-	2	5154	4834	5/16/16	2/25/17	Complete Genome	CDC	SAMN04851092	GCA_001644725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/725/GCA_001644725.1_ASM164472v1	-	2011C-3911
Franconibacter helveticus LMG 23732	1387568	PRJNA215373	215373	Proteobacteria	Gammaproteobacteria	4.52116	56	-	AWFX01	56	4327	4140	8/30/13	4/11/17	Scaffold	"Nottingham Trent University, UK"	SAMN02318523	GCA_000463115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/115/GCA_000463115.2_CroHelLMG23732_1.0	24072872	LMG 23732
Pseudobutyrivibrio sp. C4	1520803	PRJEB17054	351175	Terrabacteria group	Firmicutes	2.91965	38.9	-	FOHF01	13	2721	2641	10/29/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02910413	GCA_900111635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/635/GCA_900111635.1_IMG-taxon_2593339268_annotated_assembly	-	C4
Kandleria vitulina MC3001	1410658	PRJNA223501	223501	Terrabacteria group	Firmicutes	2.04203	35.1	-	JHWI01	54	2120	1991	4/8/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02744031	GCA_000622125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/125/GCA_000622125.1_ASM62212v1	-	MC3001
Bacillus toyonensis	155322	PRJNA374700	374700	Terrabacteria group	Firmicutes	5.45202	35.1	-	MWMG01	40	5808	5361	3/23/17	3/25/17	Scaffold	VU University Amsterdam	SAMN06330328	GCA_002071845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/071/845/GCA_002071845.1_ASM207184v1	-	VU-DES13
Smithella sp. SCADC	1499107	PRJNA246614	246614	Proteobacteria	delta/epsilon subdivisions	3.19353	44	-	JQDQ01	244	2746	2631	9/4/14	10/10/14	Contig	Hydrocarbon Metagenomic Project	SAMN02768836	GCA_000747625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/625/GCA_000747625.2_ASM74762v2	25342693	-
Capnocytophaga haemolytica	45243	PRJEB17163	351366	FCB group	Bacteroidetes/Chlorobi group	2.65567	44.3	-	FOVX01	39	2356	2231	10/31/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444369	GCA_900115315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/315/GCA_900115315.1_IMG-taxon_2693429878_annotated_assembly	-	DSM 11385
Asticcacaulis sp. AC402	1282361	PRJNA186530	186530	Proteobacteria	Alphaproteobacteria	4.32397	60.4	-	AWGC01	96	3751	3635	11/6/13	4/10/17	Contig	Indiana University	SAMN02469917	GCA_000495835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/835/GCA_000495835.1_AspAC402.1.0	24463524	AC402
Escherichia coli	562	PRJNA316786	316786	Proteobacteria	Gammaproteobacteria	5.09022	50.8845	chromosome:NZ_CP019005.1/CP019005.1; plasmid pECAZ155_2:NZ_CP019002.1/CP019002.1; plasmid pECAZ155_3:NZ_CP019003.1/CP019003.1; plasmid pECAZ155_4:NZ_CP019004.1/CP019004.1; plasmid pECAZ155_KPC:NZ_CP019001.1/CP019001.1	-	5	5343	4934	3/3/17	3/6/17	Complete Genome	University of Oxford	SAMN05511168	GCA_002012125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/125/GCA_002012125.1_ASM201212v1	-	Ecol_AZ155
Streptomyces niveus	193462	PRJNA293375	293375	Terrabacteria group	Actinobacteria	8.27559	70.8	-	MDCR01	608	7585	6944	9/11/16	3/13/17	Scaffold	USDA/ARS/NCAUR	SAMN05557883	GCA_001723055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/055/GCA_001723055.1_ASM172305v1	-	NRRL 2466
Lactobacillus equi DPC 6820	1392007	PRJNA216979	216979	Terrabacteria group	Firmicutes	2.17559	39.2	-	AWWH01	203	2119	1991	12/9/13	4/9/17	Contig	Teagasc Food Research Centre	SAMN02404457	GCA_000504525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/525/GCA_000504525.1_Lactobacillus_equi_DPC_6820	24435863	DPC 6820
Williamsia sp. 1135	1889262	PRJNA338513	338513	Terrabacteria group	Actinobacteria	5.98178	64.7	-	MJEI01	107	5635	5357	4/18/17	4/21/17	Scaffold	University of Tasmania	SAMN05567311	GCA_002095395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/395/GCA_002095395.1_ASM209539v1	-	1135
Methylibium sp. T29	1430884	PRJNA229978	229978	Proteobacteria	Betaproteobacteria	4.44942	68.7	-	AZND01	608	4539	3443	2/20/14	4/9/17	Contig	MiOxyFun	SAMN02422539	GCA_000576205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/205/GCA_000576205.1_Methylibium_sp._T29-A_2.0	26221420	T29
Legionella oakridgensis RV-2-2007	1274403	PRJNA184190	184190	Proteobacteria	Gammaproteobacteria	2.89069	40.8	-	AZYK01	150	2682	2566	1/3/14	4/9/17	Contig	"Georg-August-University of Goettingen, Genomics and Applied Microbiology, Göttinger Genomics Laboratory"	SAMN02597363	GCA_000512715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/715/GCA_000512715.1_lor.0	23932911	RV-2-2007
Salinivibrio sp. BNH	1895021	PRJNA339955	339955	Proteobacteria	Gammaproteobacteria	3.48213	50.5	-	MEBQ01	45	3192	3073	9/8/16	4/13/17	Contig	University of the Western Cape	SAMN05615530	GCA_001722105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/105/GCA_001722105.1_ASM172210v1	-	BNH
Porphyromonas crevioricanis JCM 13913	1305618	PRJDB965	231354	FCB group	Bacteroidetes/Chlorobi group	2.10844	45.4	-	BAOV01	89	1840	1742	6/6/13	4/9/17	Contig	"Microbe Division/Japan Collection of Microorganisms, RIKEN BioResource Center"	SAMD00036672	GCA_000509265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/509/265/GCA_000509265.1_ASM50926v1	23887912	JCM 13913
Candidatus Synechococcus spongiarum LMB bulk15N	1943583	PRJNA239118	239118	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.47274	60.2	-	MWLE01	107	1506	1343	3/3/17	3/6/17	Scaffold	DOE Joint Genome Institute	SAMN02745640	GCA_002018015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/015/GCA_002018015.1_ASM201801v1	-	-
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854	1150460	PRJNA237576	237576	Terrabacteria group	Actinobacteria	2.32346	56.3	-	JDUP01	68	1986	1825	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442033	GCA_000771545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/545/GCA_000771545.1_DSM-21854	25658111	DSM 21854
Kosakonia sacchari	1158459	PRJEB16027	348502	Proteobacteria	Gammaproteobacteria	4.86115	53.7	-	FMUI01	31	4703	4508	10/17/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02927897	GCA_900100995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/995/GCA_900100995.1_IMG-taxon_2596583580_annotated_assembly	-	CGMCC 1.12102
Pseudoalteromonas lipolytica	570156	PRJNA328511	328511	Proteobacteria	Gammaproteobacteria	4.38786	41.5	-	MBSZ01	49	3902	3786	8/14/16	4/13/17	Scaffold	Chonnam National University	SAMN05374560	GCA_001704875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/875/GCA_001704875.1_ASM170487v1	-	CSB02KR
Candidatus Atelocyanobacterium thalassa UBA4158	2028569	PRJNA348753	348753	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.44731	30.6	-	DFVO01	13	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454008	GCA_002380595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/595/GCA_002380595.1_ASM238059v1	28894102	-
Aeromonas dhakensis	196024	PRJNA237907	237907	Proteobacteria	Gammaproteobacteria	4.87787	61.6	-	JDWD01	271	4669	4202	6/16/14	4/9/17	Contig	USFDA	SAMN02597481	GCA_000708085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/085/GCA_000708085.1_A_dhakensis_SSU	-	SSU
Staphylococcus cohnii subsp. cohnii	74704	PRJNA279286	279286	Terrabacteria group	Firmicutes	2.85317	32.5	-	LATU01	20	2779	2635	4/15/15	4/3/17	Contig	Universidad Autonoma de Nuevo Leon	SAMN03449103	GCA_000972565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/565/GCA_000972565.1_ASM97256v1	-	57
Chloroflexi bacterium oral taxon 439 isolate Chl1	1311574	PRJNA194441	194441	Terrabacteria group	Chloroflexi	1.09701	53.9	-	APVI01	168	-	-	6/4/13	7/29/15	Contig	Oak Ridge National Laboratory	SAMN02470742	GCA_000406905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/905/GCA_000406905.1_Chl1	24738594	-
Marinimicrobium sp. UBA4509	1946811	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.78573	58.3	-	DGMV01	92	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455767	GCA_002388575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/575/GCA_002388575.1_ASM238857v1	28894102	-
Atribacteria bacterium JGI 0000014-F07	1104602	PRJNA192473	192473	unclassified Bacteria	Bacteria candidate phyla	0.321674	35.4	-	ASOZ01	28	-	-	6/3/13	7/28/15	Contig	DOE Joint Genome Institute	SAMN02440934	GCA_000405565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/405/565/GCA_000405565.1_ASM40556v1	23851394	JGI 0000014-F07
Luteimonas sp. J29	935863	PRJNA184586	184586	Proteobacteria	Gammaproteobacteria	3.40161	71.9	-	AWZR01	16	3071	2988	9/30/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441455	GCA_000472505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/505/GCA_000472505.1_ASM47250v1	-	J29
Escherichia coli	562	PRJNA316786	316786	Proteobacteria	Gammaproteobacteria	5.09048	50.8824	chromosome:NZ_CP018995.1/CP018995.1; plasmid pECAZ147_1:NZ_CP018994.1/CP018994.1; plasmid pECAZ147_2:NZ_CP018993.1/CP018993.1; plasmid pECAZ147_KPC:NZ_CP018992.1/CP018992.1	-	4	5322	4898	3/3/17	3/6/17	Complete Genome	University of Oxford	SAMN05511182	GCA_002012105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/105/GCA_002012105.1_ASM201210v1	-	Ecol_AZ147
Burkholderia lata	482957	PRJNA277422	277422	Proteobacteria	Betaproteobacteria	7.11989	66.8	-	LDWP01	166	6639	6298	6/24/15	4/10/17	Contig	University of Malaya	SAMN03751786	GCA_001038745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/745/GCA_001038745.1_ASM103874v1	-	LK27
Exiguobacterium chiriqhucha	1385984	PRJNA245187	245187	Terrabacteria group	Firmicutes	2.95249	52	-	JMEH01	23	3075	2965	12/22/15	4/11/17	Contig	Institut Cavanilles de Biodiversitat i Biologia Evolutiva	SAMN02732272	GCA_001482445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/445/GCA_001482445.1_ExiN39	-	N139
Mycobacterium iranicum UM_TJL	1370125	PRJNA213255	213255	Terrabacteria group	Actinobacteria	6.13728	66.1	-	AUWT01	119	5885	5663	8/26/13	4/8/17	Scaffold	"Universiti Malaya, Kuala Lumpur"	SAMN02471859	GCA_000455165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/165/GCA_000455165.1_Mycobacterium_iranicum_UM_TJL	24072861	UM_TJL
Bordetella trematum	123899	PRJNA252638	252638	Proteobacteria	Betaproteobacteria	4.20476	65.8	-	JPQP01	23	3846	3737	11/10/14	4/9/17	Contig	KRIBB	SAMN02866031	GCA_000773675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/675/GCA_000773675.1_ASM77367v1	25573930	HR18
Bradyrhizobium yuanmingense CCBAU 25021	1128327	PRJNA77219	77219	Proteobacteria	Alphaproteobacteria	7.99095	63.8	-	AJQK01	490	7810	7021	5/3/12	5/18/17	Contig	China Agricultural University	SAMN02469474	GCA_000261805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/805/GCA_000261805.1_25021	22586130	CCBAU 25021
Parvimonas sp. oral taxon 393 str. F0440	944565	PRJNA61837	61837	Terrabacteria group	Firmicutes	1.48317	28.2	-	AFUS01	5	1491	1185	8/10/11	4/17/17	Contig	J. Craig Venter Institute	SAMN00195327	GCA_000223315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/223/315/GCA_000223315.2_ASM22331v1	-	F0440
Rhodanobacter denitrificans	666685	PRJNA255803	255803	Proteobacteria	Gammaproteobacteria	5.14516	67.8	-	LVJP01	4419	3928	3496	4/8/16	4/8/16	Contig	ENIGMA	SAMN02929088	GCA_001617385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/385/GCA_001617385.1_ASM161738v1	27048805	FW104-R3
Bradyrhizobium liaoningense	43992	PRJNA315066	315066	Proteobacteria	Alphaproteobacteria	8.59056	63.7	-	LUKO01	242	8155	7651	3/22/16	4/12/17	Contig	"State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Northwest A&F University"	SAMN04549276	GCA_001595995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/995/GCA_001595995.1_ASM159599v1	-	CCNWSX0360
Shigella flexneri 1a	374923	PRJNA356334	356334	Proteobacteria	Gammaproteobacteria	4.90408	50.8666	chromosome:NZ_CP020342.1/CP020342.1; plasmid unnamed1:NZ_CP020343.1/CP020343.1; plasmid unnamed2:NZ_CP020344.1/CP020344.1	-	3	5376	4460	8/2/17	8/4/17	Complete Genome	Hangzhou Normal University	SAMN06111927	GCA_002240115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/115/GCA_002240115.1_ASM224011v1	-	439
Methanobrevibacter arboriphilus JCM 13429 = DSM 1125	1300164	PRJNA270577	270577	Euryarchaeota	Methanobacteria	2.44503	25.4	-	JXMW01	40	1982	1887	3/24/17	3/28/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03267482	GCA_002072215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/215/GCA_002072215.1_ASM207221v1	-	DH1
Planomicrobium glaciei	459472	PRJNA288610	288610	Terrabacteria group	Firmicutes	3.92196	46.8	-	LGAF01	106	3866	3760	8/18/15	4/11/17	Contig	UC Davis	SAMN03817206	GCA_001270075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/075/GCA_001270075.1_ASM127007v1	26472846	UCD-HAM
Desulfurococcus amylolyticus Z-533	1150674	PRJNA210335	210335	TACK group	Crenarchaeota	1.3071	45.2	-	AZUU01	1	1425	1330	1/3/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02597199	GCA_000513855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/855/GCA_000513855.1_ASM51385v1	-	Z-533
Tenacibaculum sp. HZ1	1908389	PRJNA359153	359153	FCB group	Bacteroidetes/Chlorobi group	5.63842	30.9	-	MSMP01	102	4574	4452	1/5/17	4/16/17	Contig	Shandong University at Weihai	SAMN06187576	GCA_001936575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/575/GCA_001936575.1_ASM193657v1	-	HZ1
Streptomyces exfoliatus	1905	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.61821	71.7	-	JOFB01	1601	7436	7029	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645253	GCA_000718175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/175/GCA_000718175.1_ASM71817v1	-	NRRL B-2924
Pseudomonas corrugata	47879	PRJNA290284	290284	Proteobacteria	Gammaproteobacteria	6.08394	60.6	-	LIGR01	104	5371	5186	10/23/15	4/4/17	Scaffold	Technological Educational Institute of Crete	SAMN03879927	GCA_001411965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/965/GCA_001411965.1_ASM141196v1	26300874	NCPPB2445
Aphanizomenon flos-aquae UKL13-PB	1803587	PRJNA312233	312233	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.25072	37.1	-	LTEC01	67	-	-	3/18/16	3/23/16	Contig	Oregon State University	SAMN04495916	GCA_001593825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/825/GCA_001593825.1_AFA_UKL13PB_8cells	-	-
Lebetimonas sp. JS085	931222	PRJNA208428	208428	Proteobacteria	delta/epsilon subdivisions	1.74033	31.3	-	ATHR01	5	1876	1775	1/24/14	4/17/17	Contig	Marine Biological Lab	SAMN02203836	GCA_000523295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/295/GCA_000523295.1_LebetimonasJS085	24257443	JS085
Streptococcus oralis subsp. dentisani	1458253	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.88796	41.3	-	NCVA01	41	1883	1766	4/18/17	4/21/17	Contig	Slagelse Hospital	SAMN06705608	GCA_002096685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/685/GCA_002096685.1_ASM209668v1	27325438	RH_13585_10
Ensifer adhaerens	106592	PRJNA288791	288791	Proteobacteria	Alphaproteobacteria	7.45954	61.5	-	LGAP01	99	7090	6718	8/18/15	4/11/17	Contig	Rochester Institute of Technology	SAMN03838273	GCA_001270265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/265/GCA_001270265.1_SD006_V1	-	SD006
Candidatus Accumulibacter sp. SK-11	1454000	PRJNA236435	236435	Proteobacteria	Betaproteobacteria	4.70018	63.4	-	JFAW01	94	4804	4768	3/3/14	3/3/14	Contig	Australian Centre for Ecogenomics	SAMN02445069	GCA_000584995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/995/GCA_000584995.1_capsk11	-	-
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.49402	34.8	-	LZGH01	28	2253	2160	7/21/16	4/10/17	Contig	University of Texas at Austin	SAMN05179590	GCA_001690175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/175/GCA_001690175.1_ASM169017v1	-	P83G
Mesotoga infera	1236046	PRJNA278302	278302	Thermotogae	Thermotogae	1.62226	45.4	-	LGGW01	264	1713	1713	1/8/16	1/8/16	Scaffold	Lawrence Berkeley National Lab	SAMN03445177	GCA_001509115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/115/GCA_001509115.1_ASM150911v1	26787827	-
Lysinibacillus sp. A1	1571920	PRJNA266742	266742	Terrabacteria group	Firmicutes	4.75222	37.4	-	JSZM01	57	4727	4549	12/16/14	4/10/17	Contig	University of Malaya	SAMN03174114	GCA_000801965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/965/GCA_000801965.1_ASM80196v1	25814592	A1
Lysobacter capsici	435897	PRJNA279823	279823	Proteobacteria	Gammaproteobacteria	6.12636	66.8	-	LBMI01	3	4998	4878	5/5/15	4/10/17	Scaffold	Shandong Agricultural University	SAMN03571556	GCA_000987985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/987/985/GCA_000987985.1_ASM98798v1	26044432	X2-3
Bacteroides acidifaciens	85831	PRJEB8296	276426	FCB group	Bacteroidetes/Chlorobi group	6.73196	44.1	-	CDPQ01	4357	-	-	2/24/15	2/24/15	Contig	CGS-GL	SAMEA3217986	GCA_000936065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/065/GCA_000936065.1_1a3B_assembly	-	1a3B
Flavobacterium succinicans	29536	PRJEB17114	351334	FCB group	Bacteroidetes/Chlorobi group	3.6649	35.5	-	FOUT01	52	3181	3100	10/31/16	4/14/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444143	GCA_900114945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/945/GCA_900114945.1_IMG-taxon_2693429891_annotated_assembly	-	DSM 4002
Prevotella scopos JCM 17725	1236518	PRJEB18205	355509	FCB group	Bacteroidetes/Chlorobi group	3.20989	40.7	-	FQWA01	82	2599	2411	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444364	GCA_900129535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/535/GCA_900129535.1_IMG-taxon_2695420955_annotated_assembly	-	DSM 22613
Porphyromonas cangingivalis	36874	PRJNA253604	253604	FCB group	Bacteroidetes/Chlorobi group	2.44184	47.5	-	JQJD01	65	2058	1935	10/27/14	4/9/17	Contig	UC Davis	SAMN03004337	GCA_000768995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/995/GCA_000768995.1_ASM76899v1	25858832	COT-109 OH1386
Lactobacillus gallinarum DSM 10532 = JCM 2011	1423748	PRJDB621	243199	Terrabacteria group	Firmicutes	1.91877	36.5	-	BALB01	74	1943	1563	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00003603	GCA_000614735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/735/GCA_000614735.1_ASM61473v1	-	JCM 2011
Bacteroides sartorii JCM 16497	1236538	PRJDB626	243202	FCB group	Bacteroidetes/Chlorobi group	5.90791	44.3	-	BAMF01	694	-	-	4/1/14	9/16/15	Contig	The University of Tokyo	SAMD00006042	GCA_000615645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/645/GCA_000615645.1_ASM61564v1	-	JCM 16497
Paracoccus yeei	147645	PRJNA302807	302807	Proteobacteria	Alphaproteobacteria	4.39978	67.4	-	NIPZ01	199	4257	3978	6/16/17	6/21/17	Contig	CDC	SAMN04280276	GCA_002196965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/965/GCA_002196965.1_ASM219696v1	-	G1212
Legionella lansingensis	45067	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	2.90859	40.7	-	LNYI01	77	2670	2565	12/15/15	4/11/17	Scaffold	Tel Aviv University	SAMN04274781	GCA_001467795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/795/GCA_001467795.1_ASM146779v1	26752266	ATCC 49751
Mycobacterium vulneris	547163	PRJNA305922	305922	Terrabacteria group	Actinobacteria	7.08698	66.8	-	MBEF01	108	6886	6692	7/15/16	4/13/17	Contig	JCVI	SAMN04634259	GCA_001686755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/755/GCA_001686755.1_ASM168675v1	-	ACS5020
Photobacterium phosphoreum	659	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.59711	39.4	-	LZFE01	89	4153	3915	6/24/16	4/13/17	Contig	FDA/CFSAN	SAMN04507564	GCA_001676135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/135/GCA_001676135.1_ASM167613v1	-	GCSL-P60
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.09291	42.0637	chromosome I:NZ_LT860209.1/LT860209.1; plasmid II:NZ_LT860210.1/LT860210.1	-	2	976	910	6/2/17	6/12/17	Chromosome	Functional Genomics Genter Zurich	SAMEA103890754	GCA_900169125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/125/GCA_900169125.1_SWA-86	-	-
Lactobacillus paralimentarius DSM 13238 = JCM 10415	1122151	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.54827	35.1	-	AZES01	166	2448	2363	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369493	GCA_001434985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/985/GCA_001434985.1_ASM143498v1	26415554	DSM 13238
Geobacillus thermocatenulatus	33938	PRJNA354604	354604	Terrabacteria group	Firmicutes	3.43148	52.4	-	NAGE01	153	3568	3278	4/3/17	4/5/17	Contig	"Jet Propulsion Laboratory, California Institute of Technology"	SAMN06347033	GCA_002077855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/855/GCA_002077855.1_ASM207785v1	-	SURF-114
Pseudomonas bauzanensis	653930	PRJNA239744	239744	Proteobacteria	Gammaproteobacteria	8.60877	61.8	-	JFHS01	69	8086	7839	4/15/14	10/30/14	Contig	Tianjin University	SAMN02670752	GCA_000632535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/535/GCA_000632535.1_Psebau_v14	25323719	W13Z2
Acetobacter persici	1076596	PRJNA253128	253128	Proteobacteria	Alphaproteobacteria	3.35359	58	-	JOPC01	174	3030	2892	5/19/17	5/24/17	Contig	Cornell University	SAMN02866231	GCA_002153675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/675/GCA_002153675.1_ASM215367v1	-	DmL_053
Sulfitobacter pontiacus	60137	PRJNA321723	321723	Proteobacteria	Alphaproteobacteria	3.46611	60.5	-	LXYK01	44	3367	3276	5/24/16	4/12/17	Scaffold	University of Alberta	SAMN04965931	GCA_001650835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/835/GCA_001650835.1_ASM165083v1	-	EhN02
Neochlamydia sp. EPS4	1478175	PRJNA242498	242498	PVC group	Chlamydiae	2.53068	38.1	-	JSDQ01	112	2040	1882	1/2/15	3/29/17	Contig	University of Vienna	SAMN02697210	GCA_000813665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/665/GCA_000813665.1_EPS4_v1	25069652	EPS4
Paenibacillus darwinianus	1380763	PRJNA238416	238416	Terrabacteria group	Firmicutes	3.03127	56.7	-	JFHV01	107	3051	2671	3/19/14	4/9/17	Scaffold	University of Auckland	SAMN02644518	GCA_000598105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/105/GCA_000598105.1_MB1draft	25285990	MB1
Pseudomonas moraviensis	321662	PRJNA355592	355592	Proteobacteria	Gammaproteobacteria	6.10046	59.9	-	MQUK01	24	5565	5407	12/9/16	4/16/17	Contig	UC Davis	SAMN06090297	GCA_001896125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/125/GCA_001896125.1_ASM189612v1	-	UCD-KL30
Peptococcaceae bacterium SCADC1_2_3	1487582	PRJNA243645	243645	Terrabacteria group	Firmicutes	1.1696	42.9	-	JPEE01	184	1079	1007	8/17/14	8/17/14	Contig	Hydrocarbon Metagenomic Project	SAMN02887170	GCA_000740855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/855/GCA_000740855.1_ASM74085v1	-	-
Lactobacillus kunkeei	148814	PRJNA270961	270961	Terrabacteria group	Firmicutes	1.554	37.1	-	JXCV01	24	1468	1388	9/11/15	4/4/17	Scaffold	Uppsala university	SAMN03275713	GCA_001281225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/225/GCA_001281225.1_ASM128122v1	25953738	LAan
Aeromonas enteropelogenes	29489	PRJEB7028	267799	Proteobacteria	Gammaproteobacteria	4.47474	59.7	-	CDCG01	46	4153	3958	11/24/14	4/10/17	Scaffold	UCONNMISEQ	SAMEA2752420	GCA_000819845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/845/GCA_000819845.1_PRJEB7028	-	CECT 4487
Bifidobacterium boum DSM 20432	1410645	PRJNA223490	223490	Terrabacteria group	Actinobacteria	2.16119	59.3	-	JHWO01	26	1755	1642	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743876	GCA_000687615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/615/GCA_000687615.1_ASM68761v1	-	DSM 20432
Lonsdalea quercina subsp. quercina	1082705	PRJNA242889	242889	Proteobacteria	Gammaproteobacteria	3.84784	55.6	-	JIBQ01	35	3417	3240	5/9/14	4/9/17	Contig	Colorado State University	SAMN02712573	GCA_000688695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/695/GCA_000688695.1_LonsB102	24926062	NCCB 100490
Devosia sp. 17-2-E-8	1535287	PRJNA258071	258071	Proteobacteria	Alphaproteobacteria	4.68426	64	-	JQGB01	124	4581	4403	8/25/14	4/9/17	Scaffold	Agriculture and Agri-Food Canada	SAMN02983205	GCA_000743515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/515/GCA_000743515.1_ASM74351v1	25278537	17-2-E-8
Mycoplasma hyosynoviae	29559	PRJNA238377	238377	Terrabacteria group	Tenericutes	0.864738	27.1	-	JFKM01	48	696	628	5/15/14	4/2/17	Contig	"Newport Laboratories, A Sanofi Company"	SAMN02674104	GCA_000691285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/285/GCA_000691285.1_MhyoNPL5v1.0_of_Mycoplasma_hyosynoviae_strain_NPL5_genome	24903877	NPL5
Bifidobacterium ruminantium DSM 6489	1410647	PRJNA237576	237576	Terrabacteria group	Actinobacteria	2.23033	59.2	-	JDTK01	67	1868	1727	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442041	GCA_000770925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/925/GCA_000770925.1_DSM-6489	25658111	DSM 6489
Gemmatimonas sp. SG8_17	1703355	PRJNA270657	270657	FCB group	Gemmatimonadetes	3.69185	60	-	LJNM01	456	3559	3100	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994163	GCA_001303265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/265/GCA_001303265.1_ASM130326v1	25922666	-
Edwardsiella piscicida	1263550	PRJNA362758	362758	Proteobacteria	Gammaproteobacteria	3.96904	59.48	chromosome:NZ_CP019440.1/CP019440.1; plasmid pETW41:NZ_CP019441.1/CP019441.1	-	2	3722	3500	3/31/17	4/6/17	Chromosome	Pukyong National University	SAMN06246977	GCA_002075835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/835/GCA_002075835.1_ASM207583v1	-	ETW41
Kozakia baliensis	153496	PRJNA246778	246778	Proteobacteria	Alphaproteobacteria	3.17252	57.5	-	JNAB01	106	3051	2896	6/2/14	4/9/17	Scaffold	Technische Universitaet Muenchen	SAMN02776923	GCA_000697575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/697/575/GCA_000697575.1_ASM69757v1	24970826	SR-745
Geomicrobium sp. JCM 19039	1460636	PRJDB1614	243814	Terrabacteria group	Firmicutes	4.17037	44.2	-	BAXB01	57	4407	3560	5/21/14	4/9/17	Contig	"Microbe Division/JCM, RIKEN BioResource Center"	SAMD00000376	GCA_000698145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/145/GCA_000698145.1_ASM69814v1	24948772	JCM 19039
Pseudomonas simiae	321846	PRJNA270647	270647	Proteobacteria	Gammaproteobacteria	6.10549	60.4	-	JXQT01	44	5665	5517	2/9/15	4/10/17	Contig	University of Chicago	SAMN03267954	GCA_000834615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/615/GCA_000834615.1_ASM83461v1	-	MEB105
Streptomyces fradiae	1906	PRJNA335933	335933	Terrabacteria group	Actinobacteria	7.63293	72.8	-	MCNU01	320	6574	6022	10/11/16	3/13/17	Contig	Vavilov Institute of General Genetics	SAMN05366695	GCA_001756925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/925/GCA_001756925.1_ASM175692v1	-	Olg4R
Proteiniclasticum ruminis	398199	PRJEB17147	351383	Terrabacteria group	Firmicutes	3.17307	43.6	-	FOVK01	36	2986	2874	10/31/16	4/14/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488695	GCA_900115135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/135/GCA_900115135.1_IMG-taxon_2642422541_annotated_assembly	-	ML2
Succinivibrio dextrinosolvens	83771	PRJEB17533	351989	Proteobacteria	Gammaproteobacteria	2.96174	39.7	-	FPAH01	94	2624	2484	11/2/16	4/14/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02910357	GCA_900116345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/345/GCA_900116345.1_IMG-taxon_2595698228_annotated_assembly	-	ACV-10
Sharpea azabuensis	322505	PRJEB17232	351438	Terrabacteria group	Firmicutes	2.32975	37.1	-	FOMV01	72	2400	2216	10/30/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487836	GCA_900112735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/735/GCA_900112735.1_IMG-taxon_2606217759_annotated_assembly	-	KH2P10
Escherichia coli	562	PRJNA307507	307507	Proteobacteria	Gammaproteobacteria	5.21904	50.8584	chromosome:NZ_CP013831.1/CP013831.1; plasmid pCD306:NZ_CP013832.1/CP013832.1	-	2	5457	5089	1/12/16	2/25/17	Complete Genome	University of Minnesota	SAMN04381845	GCA_001513615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/615/GCA_001513615.1_ASM151361v1	-	CD306
Sinorhizobium americanum	194963	PRJNA302539	302539	Proteobacteria	Alphaproteobacteria	6.65355	62.3	-	LNQC01	82	6279	5947	5/25/16	4/12/17	Contig	Ensifer americanum CFNEI 156T	SAMN04274562	GCA_001651855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/855/GCA_001651855.1_ASM165185v1	27125987	CFNEI 156
Salinivibrio socompensis S34	856846	PRJNA193600	193600	Proteobacteria	Gammaproteobacteria	3.33223	49.4	-	APMS01	334	-	-	1/7/14	2/7/14	Contig	Universidade Federal do Rio de Janeiro	SAMN02597454	GCA_000513735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/735/GCA_000513735.1_SaliniS341.0	-	S34
Aeromonas jandaei	650	PRJEB7031	267802	Proteobacteria	Gammaproteobacteria	4.50035	59	-	CDBV01	58	4243	3993	11/24/14	4/10/17	Scaffold	UCONNMISEQ	SAMEA2752417	GCA_000819955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/955/GCA_000819955.1_PRJEB7031	-	CECT 4228
Kitasatospora sp. NRRL B-11411	1463822	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.64318	73.9	-	JOGH01	368	7829	7389	7/2/14	4/9/17	Contig	University of Illinois	SAMN02645450	GCA_000721345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/345/GCA_000721345.1_ASM72134v1	-	NRRL B-11411
[Clostridium] aminophilum	1526	PRJEB17251	351419	Terrabacteria group	Firmicutes	3.11382	50.8	-	FOZC01	31	2697	2563	11/1/16	4/14/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910262	GCA_900112885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/885/GCA_900112885.1_IMG-taxon_2593339256_annotated_assembly	-	F
Microbulbifer sp. Q7	1785091	PRJNA294922	294922	Proteobacteria	Gammaproteobacteria	3.95317	58.4	-	LROY01	2	3245	3164	5/1/16	5/1/17	Contig	Ocean University  of China	SAMN04349613	GCA_001639145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/145/GCA_001639145.1_ASM163914v1	-	Q7
Synergistes jonesii	2754	PRJNA258234	258234	Synergistetes	Synergistia	2.63653	56.4	-	JQEK01	67	2515	2420	10/11/16	4/13/17	Contig	CSIRO	SAMN02991080	GCA_001757465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/465/GCA_001757465.1_ASM175746v1	-	78-1
Chromobacterium haemolyticum	394935	PRJNA369804	369804	Proteobacteria	Betaproteobacteria	5.33427	62.7	-	MUKT01	101	4989	4771	4/6/17	4/8/17	Contig	Centers for Disease Control and Prevention	SAMN06294329	GCA_002081815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/815/GCA_002081815.1_ASM208181v1	-	H3973
Escherichia coli	562	PRJNA297860	297860	Proteobacteria	Gammaproteobacteria	5.25041	50.8548	chromosome:NZ_CP013658.1/CP013658.1; plasmid unnamed:NZ_CP013657.1/CP013657.1	-	2	5480	5093	12/18/15	2/25/17	Complete Genome	University of Oxford	SAMN04159541	GCA_001469815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/815/GCA_001469815.1_ASM146981v1	27006459	uk_P46212
Streptomyces californicus	67281	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.3997	69.7	-	JNXW01	173	-	-	7/1/14	7/1/14	Scaffold	University of Illinois	SAMN02645297	GCA_000715715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/715/GCA_000715715.1_ASM71571v1	-	NRRL B-1221
Shewanella xiamenensis	332186	PRJNA238517	238517	Proteobacteria	Gammaproteobacteria	4.67259	46.2	-	JGVI01	110	4125	3947	6/26/14	4/11/17	Scaffold	Xiamen University	SAMN02678192	GCA_000712635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/635/GCA_000712635.2_SXM1.0_for_version_1_of_the_Shewanella_xiamenensis_genome	25103755	BC01
Streptomyces flaveus	66370	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.36274	71.5	-	JOAO01	3943	-	-	7/1/14	7/1/14	Scaffold	University of Illinois	SAMN02645369	GCA_000716155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/155/GCA_000716155.1_ASM71615v1	-	NRRL ISP-5371
Streptomyces resistomycificus	67356	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.18274	71	-	LGUS01	244	8278	7788	8/19/15	3/12/17	Contig	University of Illinois	SAMN02900586	GCA_001270505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/505/GCA_001270505.1_ASM127050v1	-	NRRL 2290
Streptomyces bikiniensis	1896	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.38994	73.1	-	JOAU01	126	6701	6268	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645375	GCA_000718595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/595/GCA_000718595.1_ASM71859v1	-	NRRL ISP-5582
Saccharothrix sp. NRRL B-16348	1415542	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.8965	71.4	-	LGED01	279	9692	9234	9/4/15	4/11/17	Contig	University of Illinois	SAMN02900649	GCA_001280085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/085/GCA_001280085.1_ASM128008v1	-	NRRL B-16348
Kitasatospora aureofaciens	1894	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.19203	72.8	-	JOER01	279	8165	7547	7/2/14	8/21/17	Contig	University of Illinois	SAMN02645243	GCA_000719175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/175/GCA_000719175.1_ASM71917v1	-	NRRL B-2657
Streptomyces anulatus	1892	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.40235	71.3	-	JOEZ01	167	7724	7109	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645251	GCA_000721175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/175/GCA_000721175.1_ASM72117v1	-	NRRL B-2873
Streptomyces virginiae	1961	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.61407	71.6	-	LGUV01	403	7760	7231	8/19/15	3/11/17	Contig	University of Illinois	SAMN02900589	GCA_001270565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/565/GCA_001270565.1_ASM127056v1	-	NRRL B-1447
Streptomyces katrae	68223	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.04942	72.8	-	JZWV01	1874	7679	6369	3/31/15	8/8/17	Contig	University of Illinois	SAMN03323304	GCA_000966975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/975/GCA_000966975.1_ASM96697v1	-	NRRL ISP-5550
Microbispora rosea subsp. rosea	58118	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.52529	70.8	-	JNZM01	11539	-	-	7/2/14	7/2/14	Contig	University of Illinois	SAMN02645341	GCA_000718465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/465/GCA_000718465.2_ASM71846v2	-	NRRL B-2630
Streptomyces varsoviensis	67373	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.26319	72.1	-	LGUT01	4864	9390	8644	8/19/15	8/19/15	Contig	University of Illinois	SAMN02900587	GCA_001270595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/595/GCA_001270595.1_ASM127059v1	-	NRRL B-3589
Lechevalieria aerocolonigenes	68170	PRJDB3170	275081	Terrabacteria group	Actinobacteria	10.6982	68.9	-	BBOJ01	55	9849	9525	2/7/15	4/10/17	Scaffold	National Institute of Technology and Evaluation	SAMD00020842	GCA_000974445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/445/GCA_000974445.1_ASM97444v1	25603349	NBRC 13195
Streptomyces albidoflavus	1886	PRJNA398273	398273	Terrabacteria group	Actinobacteria	6.79744	73	-	NTFT01	1053	6465	5142	9/11/17	9/13/17	Contig	The University of Queensland 	SAMN07505022	GCA_002289335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/335/GCA_002289335.1_CMB-CS132	-	132
Pedobacter antarcticus	34086	PRJEB17264	351487	FCB group	Bacteroidetes/Chlorobi group	4.57012	40.4	-	FONS01	25	4112	3978	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03003324	GCA_900112985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/985/GCA_900112985.1_IMG-taxon_2597490344_annotated_assembly	-	ATCC 51969
Saccharibacter sp. 3.A.1	1970094	PRJNA350232	350232	Proteobacteria	Alphaproteobacteria	2.01321	59.4	-	MNPT01	24	1812	1736	5/19/17	5/24/17	Contig	NARIC	SAMN05935507	GCA_002150125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/125/GCA_002150125.1_ASM215012v1	-	3.A.1
Bacillus vietnamensis	218284	PRJNA294026	294026	Terrabacteria group	Firmicutes	4.31625	43.5	-	LIXZ01	98	4365	4185	10/2/15	4/11/17	Contig	UC Davis	SAMN04013460	GCA_001305855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/305/855/GCA_001305855.1_ASM130585v1	26586901	UCD-SED5
Clostridium haemolyticum	84025	PRJNA310665	310665	Terrabacteria group	Firmicutes	2.87452	27.8	-	LSZB01	771	2678	1879	2/10/17	2/10/17	Contig	King Faisal Specialist Hospital & Research Centre	SAMN04451925	GCA_001994015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/015/GCA_001994015.1_ASM199401v1	28469373	KFSHRC_CH1
Shinella sp. GWS1	1692240	PRJNA291348	291348	Proteobacteria	Alphaproteobacteria	6.98972	63.7	-	LGYF01	127	6756	6494	8/14/15	6/15/17	Scaffold	University of Exeter	SAMN03943229	GCA_001267455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/455/GCA_001267455.1_GWS1v1	26769927	GWS1
Dermacoccus nishinomiyaensis	1274	PRJNA355848	355848	Terrabacteria group	Actinobacteria	3.16238	69.1	-	MQVU01	100	2889	2714	12/19/16	4/16/17	Contig	Forsyth Institute	SAMN06093813	GCA_001908945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/945/GCA_001908945.1_ASM190894v1	-	UCD-KPL2528
Alteromonas australica	589873	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.46376	44	-	DBGY01	324	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450579	GCA_002296005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/005/GCA_002296005.1_ASM229600v1	28894102	-
Vibrio metoecus	1481663	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	4.04566	46.9	-	LBGP01	50	3811	3633	10/22/15	4/4/17	Scaffold	University of Alberta	SAMN03488025	GCA_001402675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/675/GCA_001402675.1_ASM140267v1	26454015	YB5B04
Caballeronia sordidicola	196367	PRJNA355370	355370	Proteobacteria	Betaproteobacteria	7.76525	59.8	-	MSRG01	95	7208	6856	1/5/17	4/16/17	Contig	Pukyong National University	SAMN06075479	GCA_001935975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/935/975/GCA_001935975.1_ASM193597v1	-	PAMC 26592
Nonlabens ulvanivorans	906888	PRJDB1694	260427	FCB group	Bacteroidetes/Chlorobi group	3.26052	35.1	-	BBMJ01	43	3042	2309	9/5/14	4/9/17	Contig	The University of Tokyo	SAMD00017327	GCA_000755265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/265/GCA_000755265.1_ASM75526v1	25395639	JCM 19297
Desulfobacula sp. RIFOXYA12_FULL_46_16	1797911	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.69177	46.9	-	MGTL01	126	1632	1542	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316173	GCA_001799425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/425/GCA_001799425.1_ASM179942v1	27774985	-
Cellulosimicrobium sp. I38E	1393139	PRJNA313966	313966	Terrabacteria group	Actinobacteria	4.70911	74.2	-	LUAZ01	104	4208	4035	4/20/16	4/12/17	Contig	UEZO	SAMN04526759	GCA_001647255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/255/GCA_001647255.1_ASM164725v1	-	I38E
Staphylococcus agnetis	985762	PRJNA383665	383665	Terrabacteria group	Firmicutes	2.53034	35.4	-	NDYM01	69	2506	2401	4/28/17	5/3/17	Contig	University of Copenhagen	SAMN06770041	GCA_002114335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/335/GCA_002114335.1_ASM211433v1	-	722_260714_1_8_heart
Bifidobacterium coryneforme DSM 20216	1437599	PRJNA237576	237576	Terrabacteria group	Actinobacteria	1.741	60.5	-	JDUF01	67	1423	1343	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442023	GCA_000771345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/345/GCA_000771345.1_DSM-20216	25658111	DSM 20216
Serratia nematodiphila	458197	PRJNA360556	360556	Proteobacteria	Gammaproteobacteria	5.17235	59.7	-	MTBJ01	31	4894	4730	4/10/17	4/13/17	Contig	Fatima Jinnah Women University	SAMN06212348	GCA_002082115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/115/GCA_002082115.1_ASM208211v1	-	MB307
Haematobacter massiliensis	195105	PRJNA302795	302795	Proteobacteria	Alphaproteobacteria	4.12204	64.6	-	NIPY01	121	3960	3809	6/16/17	6/21/17	Contig	CDC	SAMN04279644	GCA_002196955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/955/GCA_002196955.1_ASM219695v1	-	KC2145
Haematobacter missouriensis	366616	PRJNA302795	302795	Proteobacteria	Alphaproteobacteria	4.32348	64.2	-	NIPX01	97	4200	3993	6/16/17	6/21/17	Contig	CDC	SAMN04279643	GCA_002196905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/905/GCA_002196905.1_ASM219690v1	-	H2381
Bifidobacterium actinocoloniiforme DSM 22766	1437605	PRJNA237576	237576	Terrabacteria group	Actinobacteria	1.81848	62.7	-	JDUR01	63	1510	1407	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442035	GCA_000771585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/585/GCA_000771585.1_DSM-22766	25658111	DSM 22766
Bifidobacterium gallinarum	78344	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.63265	63.4	-	DCFB01	198	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453770	GCA_002314335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/335/GCA_002314335.1_ASM231433v1	28894102	-
Bifidobacterium scardovii JCM 12489 = DSM 13734	1150461	PRJNA237576	237576	Terrabacteria group	Actinobacteria	3.14662	64.7	-	JDTN01	136	2562	2375	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442005	GCA_000770985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/985/GCA_000770985.1_DSM-13734	25658111	DSM 13734
Bifidobacterium bohemicum	638617	PRJEB15018	336302	Terrabacteria group	Actinobacteria	2.04645	57.4	-	FMAM01	18	1631	1526	8/3/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487797	GCA_900094965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/965/GCA_900094965.1_IMG-taxon_2616644833_annotated_assembly	-	R-53250
Bifidobacterium merycicum DSM 6492	1410646	PRJEB18142	355476	Terrabacteria group	Actinobacteria	2.27468	60.4	-	FQTX01	15	1881	1745	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02745589	GCA_900129045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/045/GCA_900129045.1_IMG-taxon_2563366502_annotated_assembly	-	DSM 6492
Acetobacter malorum	178901	PRJNA288385	288385	Proteobacteria	Alphaproteobacteria	3.4629	57.8	-	LHZF01	176	3170	2949	3/7/16	4/12/17	Contig	Ghent University	SAMN03799276	GCA_001580695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/695/GCA_001580695.1_ASM158069v1	-	LMG 1552
Carnobacterium divergens	2748	PRJEB14108	326231	Terrabacteria group	Firmicutes	2.74081	35.4	-	FLLU01	32	2591	2535	6/20/16	4/13/17	Contig	ANSES	SAMEA4010215	GCA_900088465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/465/GCA_900088465.1_CDIV41	-	-
Caulobacter henricii	69395	PRJNA247577	247577	Proteobacteria	Alphaproteobacteria	5.9074	69	-	JQJP01	57	5343	5188	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02787139	GCA_000745595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/595/GCA_000745595.1_ASM74559v1	-	YR570
Porticoccus hydrocarbonoclasticus	1073414	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.31208	52.5	-	DFTW01	100	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455423	GCA_002380295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/295/GCA_002380295.1_ASM238029v1	28894102	-
Luteibacter sp. 9143	1500890	PRJNA247907	247907	Proteobacteria	Gammaproteobacteria	4.62527	64.8	-	JQNL01	1	4159	4052	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02786996	GCA_000745235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/235/GCA_000745235.1_ASM74523v1	-	9143
Muricauda sp. TMED12	1986608	PRJNA385857	385857	FCB group	Bacteroidetes/Chlorobi group	4.55275	41.4	-	NHBR01	165	4204	4126	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971866	GCA_002167435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/435/GCA_002167435.1_ASM216743v1	-	-
Salegentibacter sp. K5023	1930251	PRJNA358458	358458	FCB group	Bacteroidetes/Chlorobi group	3.26425	40.1	-	MSJR01	22	2961	2892	4/4/17	4/5/17	Contig	Shandong University at Weihai	SAMN06174326	GCA_002078605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/605/GCA_002078605.1_ASM207860v1	-	K5023
Geobacillus subterraneus	129338	PRJNA318163	318163	Terrabacteria group	Firmicutes	3.30361	52.3	-	LWHE01	158	3305	3073	4/26/16	4/12/17	Contig	Research Center of Biotechnology RAS	SAMN04633529	GCA_001632595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/595/GCA_001632595.1_ASM163259v1	-	K
Sulfuricurvum sp. GWF2_44_89	1802241	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.49605	43.9	-	MIBN01	143	1611	1464	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314144	GCA_001829555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/555/GCA_001829555.1_ASM182955v1	27774985	-
Bacillus thermoamylovorans	35841	PRJNA270599	270599	Terrabacteria group	Firmicutes	3.82207	37.3	-	JXLT01	157	3626	3390	2/4/15	4/10/17	Scaffold	University of Groningen	SAMN03267284	GCA_000832175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/175/GCA_000832175.1_ASM83217v1	25814599	B4166
Thermoactinomyces sp. AS95	1811386	PRJNA312744	312744	Terrabacteria group	Firmicutes	2.55869	47.9	-	LSVF01	11	2660	2566	4/4/16	4/12/17	Contig	University of Pretoria	SAMN04505869	GCA_001606065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/065/GCA_001606065.1_ASM160606v1	-	AS95
Streptomyces leeuwenhoekii	1437453	PRJNA286686	286686	Terrabacteria group	Actinobacteria	6.87696	72.8	-	LFEH01	502	6085	5600	7/7/15	3/12/17	Contig	Wuhan University	SAMN03769433	GCA_001047315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/315/GCA_001047315.1_ASM104731v1	-	C58
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	4.9548	50.8518	chromosome:NZ_CP010200.1/CP010200.1; plasmid A:NZ_CP010201.1/CP010201.1; plasmid B:NZ_CP010202.1/CP010202.1; plasmid C:NZ_CP010203.1/CP010203.1; plasmid D:NZ_CP010204.1/CP010204.1; plasmid E:NZ_CP010205.1/CP010205.1	-	6	5109	4815	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252444	GCA_001901125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/125/GCA_001901125.1_ASM190112v1	-	M10
Escherichia coli	562	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	5.50608	50.8506	chromosome:NZ_CP021935.1/CP021935.1; plasmid unitig_2:NZ_CP021936.1/CP021936.1; plasmid unitig_3j3rc_linear:NZ_CP021937.1/CP021937.1; plasmid unitig_4:NZ_CP021938.1/CP021938.1	-	4	5855	5474	6/20/17	6/22/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014896	GCA_002202175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/175/GCA_002202175.1_ASM220217v1	-	AR_0055
Achromobacter sp. Root170	1736480	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	5.81139	66	-	LMHN01	21	5333	5201	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155749	GCA_001428165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/165/GCA_001428165.1_Root170	26633631	Root170
Lactobacillus paraplantarum DSM 10667	1423789	PRJNA222257	222257	Terrabacteria group	Firmicutes	3.39575	43.7	-	AZEO01	252	3302	3096	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369508	GCA_001435655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/655/GCA_001435655.1_ASM143565v1	26415554	DSM 10667
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	6.95894	44.1	-	MKQN01	105	6132	5985	1/18/17	4/6/17	Contig	Cornell University	SAMN05772516	GCA_001954295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/295/GCA_001954295.1_ASM195429v1	-	FSL J3-0159
Halomonas salina	42565	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.81073	63.5	-	DBAS01	160	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457499	GCA_002291785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/785/GCA_002291785.1_ASM229178v1	28894102	-
Bacillus niacini	86668	PRJNA263626	263626	Terrabacteria group	Firmicutes	2.20125	38.3	-	JRYQ01	143	2111	1922	10/23/14	2/3/15	Scaffold	The College of Wooster	SAMN03107071	GCA_000768265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/265/GCA_000768265.1_ASM76826v1	25477409	DSM 2923
Mycobacterium kyorinense	487514	PRJNA299270	299270	Terrabacteria group	Actinobacteria	5.35564	66.9	-	LLXQ01	126	5243	4977	11/6/15	4/11/17	Contig	FIOCRUZ	SAMN04196478	GCA_001439515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/515/GCA_001439515.1_ASM143951v1	22518856	HF1629
Modestobacter sp. VKM Ac-2676	1678130	PRJNA320833	320833	Terrabacteria group	Actinobacteria	3.77066	73.4	-	MBFF02	1297	4243	3187	7/21/16	1/31/17	Contig	G.K.Skryabin IBPM PAS	SAMN03783377	GCA_001691715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/715/GCA_001691715.2_ASM169171v2	-	VKM Ac-2676
Thalassotalea sp. 42_200_T64	1856287	PRJNA320927	320927	Proteobacteria	Gammaproteobacteria	3.61819	41.6	-	MABC01	94	3227	3079	5/31/17	5/31/17	Scaffold	Lawrence Berkeley National Lab	SAMN05179576	GCA_002162925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/925/GCA_002162925.1_ASM216292v1	28652349	-
Cellulophaga sp. W5C	1888890	PRJNA338344	338344	FCB group	Bacteroidetes/Chlorobi group	3.80358	32	-	MDDP01	51	3342	3274	2/13/17	4/17/17	Contig	Myongji University	SAMN05554149	GCA_001999725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/725/GCA_001999725.1_CellW5C1.0	-	W5C
Algibacter lectus	221126	PRJDB1690	262979	FCB group	Bacteroidetes/Chlorobi group	4.81598	33.3	-	BBNU01	72	4416	3149	10/2/14	4/9/17	Contig	The University of Tokyo	SAMD00017319	GCA_000764835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/835/GCA_000764835.1_ASM76483v1	25395640	JCM 19274
Jejuia pallidilutea	504487	PRJDB3152	261495	FCB group	Bacteroidetes/Chlorobi group	3.80535	33.9	-	BBNY01	98	3264	3184	10/16/14	4/9/17	Contig	Hokkaido University	SAMD00020220	GCA_000775755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/755/GCA_000775755.1_ASM77575v1	25477402	JCM 19538
Thalassobacter stenotrophicus DSM 16310	1123361	PRJEB18303	355722	Proteobacteria	Alphaproteobacteria	3.59882	58.6	-	FQYZ01	39	3618	3501	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02744035	GCA_900141945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/945/GCA_900141945.1_IMG-taxon_2585427601_annotated_assembly	-	DSM 16310
Intestinimonas butyriciproducens	1297617	PRJNA253252	253252	Terrabacteria group	Firmicutes	3.56865	58.4	-	JPJD01	108	3584	3386	10/9/14	4/9/17	Scaffold	Technical University of Denmark	SAMN02903320	GCA_000765135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/135/GCA_000765135.1_ASM76513v1	25163406	ER1
Helicobacter typhlonius	76936	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	1.83057	38.7	-	DBMB01	95	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453160	GCA_002297585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/585/GCA_002297585.1_ASM229758v1	28894102	-
Aquabacterium sp. UBA2148	1946042	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	3.53105	65.4	-	DCXA01	330	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451097	GCA_002328915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/915/GCA_002328915.1_ASM232891v1	28894102	-
Elizabethkingia miricola	172045	PRJNA293155	293155	FCB group	Bacteroidetes/Chlorobi group	4.28605	36.0726	plasmid pEM-CHUV:NZ_CM003640.1/CM003640.1	LIQC01	24	3902	3806	12/29/15	4/5/17	Contig	"Institute of Microbiology, University Hospital of Lausanne, Lausanne, Switzerland"	SAMN03998138	GCA_001483145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/483/145/GCA_001483145.1_ASM148314v1	-	EM_CHUV
Gallibacterium genomosp. 1	155515	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.37575	38.3	-	JTJQ01	55	2272	2118	7/2/16	4/13/17	Contig	University of Copenhagen	SAMN03220404	GCA_001678625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/625/GCA_001678625.1_Gal29	-	Gerl. 2740/89
Pseudomonas mediterranea	183795	PRJNA290284	290284	Proteobacteria	Gammaproteobacteria	6.28154	61.3	-	LIGZ01	150	5558	5397	10/23/15	4/11/17	Scaffold	Technological Educational Institute of Crete	SAMN03879929	GCA_001411985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/985/GCA_001411985.1_ASM141198v1	26300874	CFBP5404
Bacillus aryabhattai	412384	PRJNA273363	273363	Terrabacteria group	Firmicutes	5.54312	37.6952	plasmid pBa1:NZ_CM003163.1/CM003163.1	JXRC01	49	5726	5501	2/3/15	4/3/17	Contig	Instituto Gulbenkian de Ciencia	SAMN03291005	GCA_000876465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/465/GCA_000876465.1_ASM87646v1	25858824	C765
Bdellovibrio sp. SCN 50-8	1660090	PRJNA279279	279279	Proteobacteria	Oligoflexia	0.12077	50.3	-	MEDP01	19	109	91	9/13/16	9/13/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03652435	GCA_001724075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/075/GCA_001724075.1_ASM172407v1	26031303	-
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.62918	51	-	MPQG01	45	2565	2476	3/6/17	3/9/17	Contig	Harvard University	SAMN06016253	GCA_002020255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/255/GCA_002020255.1_ASM202025v1	-	-
Citrobacter braakii	57706	PRJNA254477	254477	Proteobacteria	Gammaproteobacteria	5.24283	51.9	-	JRHK01	64	5245	4938	11/23/14	4/2/17	Contig	Canadian Food Inspection Agency	SAMN03025290	GCA_000786265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/265/GCA_000786265.1_ASM78626v1	25573940	GTA-CB01
Clostridium baratii	1561	PRJNA290832	290832	Terrabacteria group	Firmicutes	3.08774	28.1	-	LGRR01	28	2957	2836	9/24/15	4/4/17	Contig	Shanghai Jiao Tong University	SAMN03921826	GCA_001298225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/225/GCA_001298225.1_ASM129822v1	-	XCM
Escherichia coli	562	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	4.82675	50.8492	chromosome:NZ_CP020055.1/CP020055.1; plasmid unitig_2:NZ_CP020056.1/CP020056.1; plasmid unitig_3:NZ_CP020057.1/CP020057.1	-	3	4998	4644	3/21/17	3/23/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014910	GCA_002056145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/145/GCA_002056145.1_ASM205614v1	-	AR_0069
Aureimonas altamirensis DSM 21988	1121026	PRJEB18307	355726	Proteobacteria	Alphaproteobacteria	4.19097	64.8	-	FQZC01	11	3983	3894	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745911	GCA_900141975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/975/GCA_900141975.1_IMG-taxon_2585427611_annotated_assembly	-	DSM 21988
Leisingera sp. ANG-M1	1577895	PRJNA269051	269051	Proteobacteria	Alphaproteobacteria	5.37512	62.3	-	JWLC01	92	5074	4911	1/2/15	4/10/17	Scaffold	University of Connecticut	SAMN03246058	GCA_000813745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/745/GCA_000813745.1_ASM81374v1	25755651	ANG-M1
Escherichia coli	562	PRJNA316786	316786	Proteobacteria	Gammaproteobacteria	5.17304	50.8489	chromosome:NZ_CP019012.1/CP019012.1; plasmid pECAZ161_1:NZ_CP019011.1/CP019011.1; plasmid pECAZ161_3:NZ_CP019009.1/CP019009.1; plasmid pECAZ161_KPC:NZ_CP019010.1/CP019010.1	-	4	5399	5047	3/3/17	3/6/17	Complete Genome	University of Oxford	SAMN05511166	GCA_002012265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/265/GCA_002012265.1_ASM201226v1	-	Ecol_AZ161
Desulfotomaculum sp. 46_80	1641375	PRJNA278302	278302	Terrabacteria group	Firmicutes	2.25138	45.8	-	LGGF01	107	2206	2206	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445159	GCA_001508995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/995/GCA_001508995.1_ASM150899v1	26787827	-
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	4.67746	50.8447	chromosome:NZ_CP010129.1/CP010129.1; plasmid A:NZ_CP010130.1/CP010130.1; plasmid B:NZ_CP010131.1/CP010131.1	-	3	4879	4420	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252416	GCA_001900575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/575/GCA_001900575.1_ASM190057v1	-	C9
Pseudomonas flexibilis	706570	PRJEB15725	347700	Proteobacteria	Gammaproteobacteria	3.74372	65.8	-	FMUP01	21	3521	3417	10/17/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02927929	GCA_900101515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/515/GCA_900101515.1_IMG-taxon_2596583557_annotated_assembly	-	CGMCC 1.1365
Myroides sp. N17-2	2030799	PRJNA393408	393408	FCB group	Bacteroidetes/Chlorobi group	4.29318	34.3	-	NSGJ01	142	-	-	9/6/17	9/6/17	Contig	Nanjing Tech University	SAMN07332338	GCA_002286775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/775/GCA_002286775.1_ASM228677v1	-	N17-2
Chromobacterium subtsugae	251747	PRJNA280634	280634	Proteobacteria	Betaproteobacteria	4.69104	64.9	-	LCWO01	63	4377	4226	6/5/15	4/3/17	Contig	Midwestern University	SAMN03649649	GCA_001020505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/505/GCA_001020505.1_ASM102050v1	26358592	MWU3525
Mycobacterium setense	431269	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.32709	66.3	-	LZSL01	100	6076	5912	6/17/16	4/12/17	Contig	JCVI	SAMN04691993	GCA_001665445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/445/GCA_001665445.1_ASM166544v1	-	852014-10208_SCH5295773
Morococcus cerebrosus	1056807	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	2.44448	51	-	JVFL01	145	2415	2125	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197673	GCA_001063455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/455/GCA_001063455.1_ASM106345v1	26230489	480_NMEN
Microbacterium hominis	162426	PRJNA306491	306491	Terrabacteria group	Actinobacteria	3.50624	70.9	-	LRYC01	73	3287	3002	2/9/16	4/11/17	Contig	Public Health Agency of Canada	SAMN04350845	GCA_001553805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/805/GCA_001553805.1_ASM155380v1	-	LCDC 84-0209
Halomonas caseinilytica	438744	PRJNA271216	271216	Proteobacteria	Gammaproteobacteria	3.46398	63.5	-	JXAS01	63	-	-	1/6/15	1/6/15	Contig	Directorate of Groundnut Research (Indian Council of Agricultural Research)	SAMN03273309	GCA_000815425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/425/GCA_000815425.1_ASM81542v1	-	WD26
Pseudomonas balearica	74829	PRJNA305687	305687	Proteobacteria	Gammaproteobacteria	4.29368	65	-	LONE02	60	4062	3914	2/25/16	4/17/17	Scaffold	University of Gothenburg - CCUG	SAMN04331779	GCA_001575035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/035/GCA_001575035.2_ASM157503v2	-	LS401
Enterobacter ludwigii	299767	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.58563	55.7	-	LEDX02	30	4387	4223	6/9/15	4/5/17	Contig	JCVI	SAMN03732706	GCA_001022435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/435/GCA_001022435.2_ASM102243v2	-	GN02450
Aeromonas allosaccharophila	656	PRJEB7045	267816	Proteobacteria	Gammaproteobacteria	4.70859	58.6	-	CDCB01	131	4378	4138	11/24/14	4/10/17	Scaffold	UCONNMISEQ	SAMEA2752403	GCA_000820245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/245/GCA_000820245.1_PRJEB7045	-	BVH88
Aeromonas schubertii	652	PRJNA304368	304368	Proteobacteria	Gammaproteobacteria	4.14023	61.7	-	LPUO01	57	3940	3762	12/22/15	4/11/17	Scaffold	"Pearl River Fishery Research Institute, Chinese Academy of Fishery Sciences"	SAMN04299626	GCA_001481395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/395/GCA_001481395.1_ASM148139v1	26893413	ATCC 43700
Mesorhizobium plurifarium	69974	PRJEB6722	261145	Proteobacteria	Alphaproteobacteria	7.23424	63.7	-	CCNE01	67	6998	6765	9/15/14	4/10/17	Scaffold	IRD	SAMEA2677840	GCA_000824765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/765/GCA_000824765.1_Draft_Genome_Assembly_ORS3365-1	-	-
Pseudomonas xanthomarina	271420	PRJNA328204	328204	Proteobacteria	Gammaproteobacteria	4.60776	63	-	MDEM01	40	4301	4160	8/15/16	4/13/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN05366370	GCA_001705225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/225/GCA_001705225.1_ASM170522v1	-	UASWS0955
Tessaracoccus sp. ZS01	1906324	PRJNA345292	345292	Terrabacteria group	Actinobacteria	3.1843	68.4	-	MTHC01	41	2864	2751	1/18/17	4/17/17	Contig	University of Huddersfield	SAMN05860611	GCA_001956895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/895/GCA_001956895.1_ASM195689v1	-	ZS01
Sporosarcina koreensis	334735	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.03455	41.1	-	DFVE01	31	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451751	GCA_002380485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/485/GCA_002380485.1_ASM238048v1	28894102	-
Escherichia coli	562	PRJNA402083	402083	Proteobacteria	Gammaproteobacteria	4.98704	50.8432	chromosome:NZ_CP023386.1/CP023386.1; plasmid p86:NZ_CP023387.1/CP023387.1	-	2	5113	4817	9/18/17	9/20/17	Complete Genome	The Roslin Institute	SAMN07618121	GCA_002310615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/615/GCA_002310615.1_ASM231061v1	-	1190
Winogradskyella sp. PC-19	754417	PRJNA357128	357128	FCB group	Bacteroidetes/Chlorobi group	2.97752	33	chromosome:NZ_CP019332.1/CP019332.1	-	1	2777	2712	6/2/17	6/5/17	Chromosome	"Atmosphere and Ocean Research Institute, The University of Tokyo"	SAMN06133349	GCA_002163855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/855/GCA_002163855.1_ASM216385v1	-	PC-19
Lactobacillus hokkaidonensis JCM 18461	1291742	PRJDB780	243692	Terrabacteria group	Firmicutes	2.33581	38.1	-	BBAY01	67	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000460	GCA_001311505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/505/GCA_001311505.1_ASM131150v1	-	JCM 18461
Cohnella sp. OV330	1855288	PRJEB17086	351704	Terrabacteria group	Firmicutes	7.46684	59.3	-	FOKE01	29	6305	6131	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216312	GCA_900112065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/065/GCA_900112065.1_IMG-taxon_2615840604_annotated_assembly	-	OV330
Marinobacter salarius	1420917	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.35293	57.1	-	DCAM01	85	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06456913	GCA_002311495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/495/GCA_002311495.1_ASM231149v1	28894102	-
Bacillus badius NBRC 15713	1348627	PRJDB1315	231372	Terrabacteria group	Firmicutes	3.99636	43.9	-	BCVF01	117	4042	3938	2/27/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046990	GCA_001591605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/605/GCA_001591605.1_ASM159160v1	-	NBRC 15713
Wolbachia endosymbiont of Dactylopius coccus	1605993	PRJNA244295	244295	Proteobacteria	Alphaproteobacteria	1.12497	34.3	-	JMCJ01	1064	-	-	2/5/15	2/5/15	Contig	Harvard University	SAMN02725058	GCA_000832695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/695/GCA_000832695.1_ASM83269v1	25691985	wCoc1
Pseudomonas abietaniphila	89065	PRJEB15899	347946	Proteobacteria	Gammaproteobacteria	7.22245	59.4	-	FNCO01	54	6653	6479	10/20/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216605	GCA_900100795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/795/GCA_900100795.1_IMG-taxon_2667527211_annotated_assembly	-	ATCC 700689
Frigoribacterium sp. Leaf254	1736308	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.42397	71.3	-	LMMF01	4	3204	3116	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151698	GCA_001422145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/145/GCA_001422145.1_Leaf254	26633631	Leaf254
Mycobacterium immunogenum	83262	PRJNA294421	294421	Terrabacteria group	Actinobacteria	5.64992	64.1	-	LJFQ01	45	5653	5470	9/22/15	4/4/17	Contig	US EPA	SAMN04025494	GCA_001296245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/245/GCA_001296245.1_ASM129624v1	26744376	H068
Escherichia coli O25b:H4-ST131	941322	PRJEA61443	61443	Proteobacteria	Gammaproteobacteria	5.24945	50.8431	chromosome I:NZ_HG941718.1/HG941718.1; plasmid pEC958:NZ_HG941719.1/HG941719.1; plasmid pEC958B:NZ_HG941720.1/HG941720.1	-	3	5472	5109	3/11/14	2/23/17	Complete Genome	The University of Queensland	SAMEA2272019	GCA_000285655.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/655/GCA_000285655.3_EC958.v1	25126841	EC958
Aneurinibacillus migulanus	47500	PRJNA274576	274576	Terrabacteria group	Firmicutes	5.97346	43.2	-	JYBN01	128	5965	5681	2/20/15	4/3/17	Scaffold	University of Neuchatel	SAMN03329519	GCA_000878885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/885/GCA_000878885.1_ASM87888v1	25838487	nagano
Sulfitobacter pseudonitzschiae	1402135	PRJEB18191	355426	Proteobacteria	Alphaproteobacteria	4.95164	61.7	-	FQVP01	35	4801	4714	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444149	GCA_900129395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/395/GCA_900129395.1_IMG-taxon_2695420945_annotated_assembly	-	DSM 26824
Halomonas meridiana	29570	PRJEB18176	355443	Proteobacteria	Gammaproteobacteria	3.86408	57	-	FSQY01	2	3740	3517	12/14/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05878249	GCA_900129255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/255/GCA_900129255.1_IMG-taxon_2698536813_annotated_assembly	-	ACAM 246
Photobacterium kishitanii	318456	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	5.12388	38.7	-	JZTD01	107	4610	4213	3/10/15	4/3/17	Contig	FDA/CFSAN	SAMN03295466	GCA_000950075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/075/GCA_000950075.1_CFSAN029418_01.0	25931609	GCSL-A1-2
Escherichia coli	562	PRJNA316786	316786	Proteobacteria	Gammaproteobacteria	5.39532	50.8423	chromosome:NZ_CP018970.1/CP018970.1; plasmid pEC542_1:NZ_CP018969.1/CP018969.1; plasmid pEC542_3:NZ_CP018967.1/CP018967.1; plasmid pEC542_4:NZ_CP018966.1/CP018966.1; plasmid pEC542_KPC:NZ_CP018968.1/CP018968.1	-	5	5717	5321	3/3/17	3/6/17	Complete Genome	University of Oxford	SAMN05511186	GCA_002012025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/025/GCA_002012025.1_ASM201202v1	-	Ecol_542
Moritella viscosa	80854	PRJEB16014	348508	Proteobacteria	Gammaproteobacteria	4.9572	39.3	-	FPLE01	179	4442	4182	11/24/16	4/11/17	Contig	UNIVERSITY OF TROMSO	SAMEA4520416	GCA_900119985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/985/GCA_900119985.1_clc.v6.5.NVI5482.01	-	-
Aliivibrio wodanis	80852	PRJNA302718	302718	Proteobacteria	Gammaproteobacteria	4.56722	38.3	-	LNRJ01	57	4096	3934	2/10/16	4/4/17	Contig	University of Cambridge	SAMN04279304	GCA_001557835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/835/GCA_001557835.1_ASM155783v1	-	CL3
Ralstonia mannitolilytica	105219	PRJDB3529	276533	Proteobacteria	Betaproteobacteria	4.66923	65.8	-	BBUP01	48	4387	4236	3/3/15	4/10/17	Contig	National Institute of Infectious Diseases	SAMD00026327	GCA_000953875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/875/GCA_000953875.1_ASM95387v1	25953190	MRY14-0246
Elizabethkingia sp. F8124	1873418	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	4.24699	35.6	-	MBDR01	36	3858	3761	3/8/17	3/11/17	Contig	CDC	SAMN05334989	GCA_002023385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/385/GCA_002023385.1_ASM202338v1	-	F8124
Terrabacter sp. Soil811	1736419	PRJNA298127	298127	Terrabacteria group	Actinobacteria	4.90026	71.5	-	LMSX01	14	4488	4369	11/2/15	4/11/17	Scaffold	ETH Zurich	SAMN04155684	GCA_001429655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/655/GCA_001429655.1_Soil811	26633631	Soil811
Kosakonia oryzae	497725	PRJNA275839	275839	Proteobacteria	Gammaproteobacteria	5.01063	53.9	-	JZLI01	69	4849	4637	3/20/15	4/10/17	Contig	International Centre for Genetic Engineering and Biotechnology	SAMN03354161	GCA_000958895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/895/GCA_000958895.1_ASM95889v1	26044436	KO348
Vulcanisaeta sp. JCM 14467	1295370	PRJDB849	252062	TACK group	Crenarchaeota	2.44388	46.7	-	BBDM01	25	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000523	GCA_001316245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/245/GCA_001316245.1_ASM131624v1	-	JCM 14467
Thermoproteus sp. JCHS_4	1714258	PRJNA295311	295311	TACK group	Crenarchaeota	1.76008	61.2	-	LOBZ01	32	1994	1724	1/15/16	1/15/16	Scaffold	Montana State University	SAMN04045695	GCA_001516655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/655/GCA_001516655.1_ASM151665v1	-	-
Acetobacter indonesiensis	104101	PRJNA253128	253128	Proteobacteria	Alphaproteobacteria	3.32586	53.9	-	JOPA01	125	3037	2884	5/19/17	5/24/17	Contig	Cornell University	SAMN02866229	GCA_002153545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/545/GCA_002153545.1_ASM215354v1	-	DmL_051
Acetobacter orientalis	146474	PRJNA253128	253128	Proteobacteria	Alphaproteobacteria	2.74517	53.7	-	JOOY01	210	2573	2425	5/19/17	8/21/17	Contig	Cornell University	SAMN02866227	GCA_002153685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/685/GCA_002153685.1_ASM215368v1	-	DmW_048
Acetobacter orleanensis	104099	PRJNA407878	407878	Proteobacteria	Alphaproteobacteria	3.01267	56.4	-	NWTP01	49	2728	2556	9/25/17	10/2/17	Scaffold	Comenius University in Bratislava	SAMN07665553	GCA_002358055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/358/055/GCA_002358055.1_ASM235805v1	-	CCM 3610
Acetobacter syzygii 9H-2	1231343	PRJDB503	174854	Proteobacteria	Alphaproteobacteria	2.68737	55.5	-	BAMZ01	94	2496	2402	3/20/15	4/17/17	Scaffold	Kinki University	SAMD00036635	GCA_000964225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/225/GCA_000964225.1_ASM96422v1	-	9H-2
Comamonas thiooxydans	363952	PRJNA296943	296943	Proteobacteria	Betaproteobacteria	5.30658	61.5	-	LKFB01	48	4920	4755	5/9/16	4/12/17	Contig	Nagaoka University of Technology	SAMN04112248	GCA_001640845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/845/GCA_001640845.1_ASM164084v1	-	PHE2-6
Domibacillus enclensis	1017273	PRJNA373956	373956	Terrabacteria group	Firmicutes	3.83573	46.5	-	MWSK01	24	3807	3684	8/1/17	8/3/17	Contig	CSIR- National Chemical Laboratory	SAMN06319218	GCA_002237775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/775/GCA_002237775.1_ASM223777v1	-	DSM 25145
Escherichia coli	562	PRJNA307507	307507	Proteobacteria	Gammaproteobacteria	5.3171	50.8416	chromosome:NZ_CP013835.1/CP013835.1; plasmid pJJ2434_1:NZ_CP013833.1/CP013833.1; plasmid pJJ2434_2:NZ_CP013834.1/CP013834.1	-	3	5590	5196	1/12/16	2/25/17	Complete Genome	University of Minnesota	SAMN04381854	GCA_001513635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/635/GCA_001513635.1_ASM151363v1	-	JJ2434
Mycobacterium nebraskense	244292	PRJNA284996	284996	Terrabacteria group	Actinobacteria	6.53999	66.6	-	LDPP01	175	6159	5824	6/8/15	4/10/17	Scaffold	UCSF	SAMN03734848	GCA_001021495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/495/GCA_001021495.1_ASM102149v1	-	AKUC2
Chromobacterium vaccinii	1108595	PRJNA277484	277484	Proteobacteria	Betaproteobacteria	4.95897	64.3	-	JZJJ01	123	4588	4371	4/9/15	4/10/17	Contig	Midwestern University	SAMN03393288	GCA_000971355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/355/GCA_000971355.1_ASM97135v1	25999572	MWU328
Yersinia wautersii	1341643	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.85885	47.3	-	CVMG01	103	4522	4170	4/10/15	4/11/17	Scaffold	SC	SAMEA859925	GCA_001319825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/825/GCA_001319825.1_5139_1_1	-	WP-931201
Staphylococcus argenteus	985002	PRJNA227695	227695	Terrabacteria group	Firmicutes	2.80652	32.3	-	JGMK01	38	2810	2619	3/27/14	7/24/17	Scaffold	Broad Institute	SAMN02402619	GCA_000606605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/605/GCA_000606605.1_Stap_aure_M21126_V1	-	M21126
Streptomyces europaeiscabiei	146819	PRJNA309848	309848	Terrabacteria group	Actinobacteria	10.5156	70.5	-	LRTQ01	1080	9679	8268	2/5/16	3/12/17	Contig	University of Florida	SAMN04441019	GCA_001550325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/550/325/GCA_001550325.1_ASM155032v1	-	89-04
Staphylococcus succinus	61015	PRJNA309523	309523	Terrabacteria group	Firmicutes	2.80264	33	-	LUJH01	11	2702	2595	4/25/16	4/12/17	Contig	Queen's University Belfast	SAMN04546332	GCA_001630745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/630/745/GCA_001630745.1_ASM163074v1	27284152	CSM-77
Nitrosomonas communis	44574	PRJEB17477	351674	Proteobacteria	Betaproteobacteria	4.42103	44.3	-	FOUB01	195	4216	3727	10/31/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421863	GCA_900114745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/745/GCA_900114745.1_IMG-taxon_2675903043_annotated_assembly	-	Nm44
Escherichia coli	562	PRJNA316786	316786	Proteobacteria	Gammaproteobacteria	5.0658	50.8406	chromosome:NZ_CP018983.1/CP018983.1; plasmid pEC867_1:NZ_CP018982.1/CP018982.1; plasmid pEC867_3:NZ_CP018980.1/CP018980.1; plasmid pEC867_KPC:NZ_CP018981.1/CP018981.1	-	4	5260	4904	3/3/17	3/6/17	Complete Genome	University of Oxford	SAMN05511148	GCA_002012205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/205/GCA_002012205.1_ASM201220v1	-	Ecol_867
Vibrio antiquarius	150340	PRJNA186633	186633	Proteobacteria	Gammaproteobacteria	5.43066	44.6	-	AOJB01	46	5206	5000	12/20/16	4/16/17	Contig	NOAA	SAMN02212510	GCA_001909305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/305/GCA_001909305.1_ASM190930v1	-	Ex25_939
Methyloversatilis discipulorum	1119528	PRJNA77977	77977	Proteobacteria	Betaproteobacteria	4.25101	66.6	-	ARVV01	1	3969	3888	4/26/13	6/20/17	Contig	JGI	SAMN02261290	GCA_000385375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/375/GCA_000385375.1_ASM38537v1	-	RZ18-153
Staphylococcus condimenti	70255	PRJNA279821	279821	Terrabacteria group	Firmicutes	2.61617	34.6	-	LAQN01	80	2508	2412	5/28/15	4/10/17	Contig	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN03450771	GCA_001014685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/014/685/GCA_001014685.1_ASM101468v1	27257207	DSM 11674
Shigella flexneri 4c	1617964	PRJNA356348	356348	Proteobacteria	Gammaproteobacteria	4.76766	50.8342	chromosome:NZ_CP020339.1/CP020339.1; plasmid unnamed1:NZ_CP020340.1/CP020340.1; plasmid unnamed2:NZ_CP020341.1/CP020341.1	-	3	5203	4324	8/2/17	8/4/17	Complete Genome	Hangzhou Normal University	SAMN06112243	GCA_002240095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/095/GCA_002240095.1_ASM224009v1	-	702
Marinitoga sp. 1155	1428448	PRJNA229502	229502	Thermotogae	Thermotogae	2.4354	27.3	-	AZAX01	56	2270	2171	6/7/15	4/18/17	Contig	University of Alberta	SAMN03764407	GCA_001021175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/175/GCA_001021175.1_ASM102117v1	-	1155
Mycobacterium heraklionense	512402	PRJNA305922	305922	Terrabacteria group	Actinobacteria	4.79952	67.5	-	LZLB01	96	4529	4316	6/17/16	4/13/17	Contig	JCVI	SAMN04634164	GCA_001673105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/105/GCA_001673105.1_ASM167310v1	-	1245976.6
Bacillus circulans	1397	PRJNA395369	395369	Terrabacteria group	Firmicutes	5.01172	35.5	-	NPBT01	117	4756	4615	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372694	GCA_002271635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/635/GCA_002271635.1_assembly-7524_v1	-	7524
Mycobacterium sinense	875328	PRJNA305922	305922	Terrabacteria group	Actinobacteria	4.66239	68.6	-	LZJK01	168	4482	4191	6/17/16	4/12/17	Contig	JCVI	SAMN04634232	GCA_001667945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/945/GCA_001667945.1_ASM166794v1	-	E1572
Lactobacillus acetotolerans	1600	PRJNA283920	283920	Terrabacteria group	Firmicutes	1.5351	36.5	-	LTDX01	96	1492	1350	5/2/16	4/12/17	Scaffold	South China University of Technology	SAMN03657283	GCA_001636155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/155/GCA_001636155.1_ASM163615v1	-	BM-LA14527
Bacillus marisflavi	189381	PRJNA277413	277413	Terrabacteria group	Firmicutes	4.36028	48.6	-	LDWJ01	44	4451	4301	6/24/15	4/10/17	Contig	University of Malaya	SAMN03747901	GCA_001038855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/855/GCA_001038855.1_ASM103885v1	-	LK19
Pseudomonas lini	163011	PRJNA287868	287868	Proteobacteria	Gammaproteobacteria	6.54508	58.7	-	LFQO01	327	6008	5800	8/5/15	4/10/17	Contig	University of Malaya	SAMN03793174	GCA_001238395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/395/GCA_001238395.1_ASM123839v1	-	ZBG1
Leclercia sp. UBA1284	1946737	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.34945	55.1	-	DBUS01	9	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06455758	GCA_002308415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/415/GCA_002308415.1_ASM230841v1	28894102	-
Methylobacterium platani JCM 14648	1295136	PRJDB842	245939	Proteobacteria	Alphaproteobacteria	2.48835	66	-	BBDG01	2268	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000524	GCA_001312265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/265/GCA_001312265.1_ASM131226v1	-	JCM 14648
Methylobacterium aquaticum	270351	PRJNA278212	278212	Proteobacteria	Alphaproteobacteria	6.35393	71	-	LDRM01	443	5897	5540	12/22/15	4/11/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401377	GCA_001476215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/215/GCA_001476215.1_ASM147621v1	26793183	NS229
Nereida ignava DSM 16309	1122600	PRJEB17400	351608	Proteobacteria	Alphaproteobacteria	2.83794	54.1	-	FORZ01	36	2829	2700	10/31/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02745667	GCA_900114125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/125/GCA_900114125.1_IMG-taxon_2599185238_annotated_assembly	-	DSM 16309
Mycobacterium conceptionense	451644	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.3866	66.5	-	LZIA01	92	6173	6002	6/17/16	4/5/17	Contig	JCVI	SAMN04634258	GCA_001667225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/225/GCA_001667225.1_ASM166722v1	-	ACS2995
bacteria symbiont BFo1 of Frankliniella occidentalis	1628855	PRJNA234511	234511	unclassified Bacteria	unclassified Bacteria (miscellaneous)	5.1724	56.3	-	LAGP01	130	4910	4574	3/30/16	3/30/16	Scaffold	Swansea University	SAMN03389132	GCA_001602545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/545/GCA_001602545.1_ASM160254v1	-	SwAb130
bacteria symbiont BFo2 of Frankliniella occidentalis	1628856	PRJNA234511	234511	unclassified Bacteria	unclassified Bacteria (miscellaneous)	3.24396	47.5	-	LAGS01	68	3160	2913	3/30/16	3/30/16	Scaffold	Swansea University	SAMN03389135	GCA_001602605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/605/GCA_001602605.1_ASM160260v1	-	Swan69
Nonomuraea sp. SBT364	1580530	PRJNA280805	280805	Terrabacteria group	Actinobacteria	9.98614	71.7	-	LAVL01	361	9526	9012	7/17/15	4/11/17	Scaffold	University of Wuerzburg	SAMN03470206	GCA_001083785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/785/GCA_001083785.1_Nonomuraea_sp_SBT364_SPAdes_SSPACE	-	SBT364
Actinobaculum suis	1657	PRJNA287444	287444	Terrabacteria group	Actinobacteria	2.22511	57.8	-	MASX01	51	1797	1681	7/14/16	4/13/17	Contig	School of Veterinary Medicine and Animal Science / University of Sao Paulo	SAMN03783261	GCA_001685165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/165/GCA_001685165.1_ASM168516v1	-	C1-22-1
Pseudomonas trivialis	200450	PRJNA274345	274345	Proteobacteria	Gammaproteobacteria	5.58791	61	-	JYLK01	46	5129	4873	11/6/15	4/11/17	Contig	"Zentralinstitut fuer Ernaehrungs- und Lebensmittelforschung (ZIEL), WZW, TUM"	SAMN03328799	GCA_001439805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/805/GCA_001439805.1_G8691	-	DSM 14937
Paracoccus sanguinis	1545044	PRJNA254739	254739	Proteobacteria	Alphaproteobacteria	3.42204	70.7	-	JRKR01	309	3323	3062	10/6/14	4/9/17	Contig	Wadsworth Center / NYSDOH	SAMN02927205	GCA_000763825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/825/GCA_000763825.1_ASM76382v1	-	10990
uncultured Acidilobus sp. OSP8	1410575	PRJNA221622	221622	TACK group	Crenarchaeota	1.43082	59	-	AYMC01	42	1744	1693	11/5/13	11/5/13	Contig	Montana State University	SAMN02364257	GCA_000495715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/715/GCA_000495715.1_Acidilobus_sp._CIS	-	-
Trabulsiella odontotermitis	379893	PRJNA251524	251524	Proteobacteria	Gammaproteobacteria	4.81735	55.1	-	JNGI01	192	4697	4455	7/29/15	4/4/17	Contig	University of Copenhagen	SAMN02836822	GCA_001188495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/495/GCA_001188495.1_ASM118849v1	26162887	12
Escherichia coli	562	PRJNA387731	387731	Proteobacteria	Gammaproteobacteria	5.11324	50.829	chromosome:NZ_CP021454.1/CP021454.1; plasmid pH105:NZ_CP021871.1/CP021871.1	-	2	5325	4951	6/14/17	6/19/17	Complete Genome	"Institute of Medical Microbiology , Justus Liebig University Giessen "	SAMN07162922	GCA_002193095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/095/GCA_002193095.1_ASM219309v1	-	H105
Virgibacillus pantothenticus	1473	PRJEB18840	360739	Terrabacteria group	Firmicutes	4.69881	37.2	-	FTOS01	47	4283	4046	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421787	GCA_900156795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/795/GCA_900156795.1_IMG-taxon_2681813560_annotated_assembly	-	DSM 26
Jeotgalibaca dankookensis	708126	PRJDB4066	290873	Terrabacteria group	Firmicutes	2.03457	37.1	-	BBYO01	45	2074	1936	7/23/15	4/10/17	Scaffold	Korea Polar Research Institute	SAMD00035447	GCA_001263715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/715/GCA_001263715.1_ASM126371v1	-	CL-AS1
Lactobacillus agilis DSM 20509	1423718	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.05806	41.7	-	AYYP01	72	2057	1897	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369373	GCA_001436215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/215/GCA_001436215.1_ASM143621v1	26415554	DSM 20509
Vibrio lentus	136468	PRJNA328102	328102	Proteobacteria	Gammaproteobacteria	5.53213	44.1	-	MKKO01	40	4898	4744	1/28/17	4/17/17	Scaffold	Massachusetts Institute of Technology	SAMN05768151	GCA_001974605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/974/605/GCA_001974605.1_ASM197460v1	-	10N.222.54.E4
Nautella italica	481446	PRJEB9394	290268	Proteobacteria	Alphaproteobacteria	4.04957	59.9	-	CVQZ01	37	3827	3723	7/19/15	4/11/17	Contig	UVEG	SAMEA3393043	GCA_001404195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/195/GCA_001404195.1_N.italicaCECT7645_SPADES	-	CECT 7645
Escherichia coli	562	PRJNA383781	383781	Proteobacteria	Gammaproteobacteria	5.1478	50.829	chromosome:NZ_CP021179.1/CP021179.1; plasmid pEC-81009:NZ_CP021180.1/CP021180.1	-	2	5368	5006	5/24/17	5/30/17	Complete Genome	Arsanis Biosciences GmbH	SAMN06808253	GCA_002157245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/245/GCA_002157245.1_ASM215724v1	-	81009
Pseudomonas thivervalensis	86265	PRJNA290438	290438	Proteobacteria	Gammaproteobacteria	6.77176	61	-	LHVF01	26	6079	5880	8/18/15	4/11/17	Contig	JLU	SAMN03891672	GCA_001269685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/685/GCA_001269685.1_ASM126968v1	-	PITR2
Streptomyces antibioticus	1890	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.97886	71.9	-	LGUX01	343	9106	8387	8/19/15	3/11/17	Contig	University of Illinois	SAMN02900593	GCA_001270635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/635/GCA_001270635.1_ASM127063v1	-	NRRL B-2032
Achromatium sp. WMS1	1604834	PRJNA273490	273490	Proteobacteria	Gammaproteobacteria	1.31364	39.1	-	JXSM01	669	1396	1174	8/31/15	9/1/15	Contig	Pennsylvania State University	SAMN03292483	GCA_001276625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/625/GCA_001276625.1_ASM127662v1	26322031	-
Mangrovimonas sp. ST2L15	1645916	PRJNA281691	281691	FCB group	Bacteroidetes/Chlorobi group	3.55654	36.2	-	LBIQ01	56	3141	3060	9/9/15	4/11/17	Contig	UNIVERSITI SAINS MALAYSIA	SAMN03494315	GCA_001280515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/515/GCA_001280515.1_ASM128051v1	-	ST2L15
Pantoea septica	472695	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.8387	59.2	-	DCLK01	243	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451778	GCA_002321015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/015/GCA_002321015.1_ASM232101v1	28894102	-
Helicobacter ailurogastricus	1578720	PRJEB7933	293179	Proteobacteria	delta/epsilon subdivisions	1.57874	47.6	-	CDML01	56	1594	1472	8/17/15	4/11/17	Scaffold	UGENT	SAMEA3172285	GCA_001283025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/025/GCA_001283025.1_gastric_feline_helicobacters	-	-
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	5.01909	50.8288	chromosome:NZ_CP010145.1/CP010145.1; plasmid A:NZ_CP010146.1/CP010146.1; plasmid B:NZ_CP010147.1/CP010147.1	-	3	5198	4820	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252423	GCA_001900675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/675/GCA_001900675.1_ASM190067v1	-	D5
Arthrobacter alpinus	656366	PRJEB16484	349372	Terrabacteria group	Actinobacteria	4.62264	60.6	-	FNTV01	2	4245	4056	10/22/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04489740	GCA_900105965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/965/GCA_900105965.1_IMG-taxon_2634166197_annotated_assembly	-	DSM 22274
Pseudomonas libanensis	75588	PRJNA274345	274345	Proteobacteria	Gammaproteobacteria	6.21423	60.2	-	JYLH01	43	5710	5493	11/6/15	4/11/17	Contig	"Zentralinstitut fuer Ernaehrungs- und Lebensmittelforschung (ZIEL), WZW, TUM"	SAMN03328793	GCA_001439685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/685/GCA_001439685.1_G8685	-	DSM 17149
Coxiella sp. RIFCSPHIGHO2_12_FULL_42_15	1797696	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	1.63824	42.1	-	MGOZ01	53	1537	1460	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315662	GCA_001797285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/285/GCA_001797285.1_ASM179728v1	27774985	-
Pseudoalteromonas tetraodonis	43659	PRJNA328511	328511	Proteobacteria	Gammaproteobacteria	3.67539	40.3	-	MBMS01	49	3402	3143	9/12/16	4/13/17	Scaffold	Chonnam National University	SAMN05374559	GCA_001723425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/425/GCA_001723425.1_ASM172342v1	-	CSB01KR
Granulicatella sp. 572.rep2_STHE	1725362	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.03028	37.5	-	JVBN01	47	1997	1915	7/10/15	4/10/17	Contig	University of Washington	SAMN03197775	GCA_001071365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/365/GCA_001071365.1_ASM107136v1	26230489	572.rep2_STHE
Staphylococcus schweitzeri	1654388	PRJEB6395	256292	Terrabacteria group	Firmicutes	2.72583	32.3	-	CCEO01	54	2696	2542	9/6/14	4/9/17	Contig	WTSI	SAMEA2008096	GCA_000752075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/075/GCA_000752075.1_Sa_FSA090	-	-
Escherichia coli	562	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.51434	50.8264	chromosome:NZ_CP013025.1/CP013025.1; plasmid unnamed1:NZ_CP013024.1/CP013024.1; plasmid unnamed2:NZ_CP013026.1/CP013026.1; plasmid unnamed3:NZ_CP013027.1/CP013027.1	-	4	5845	5388	10/30/15	2/25/17	Complete Genome	CDC	SAMN02991226	GCA_001420955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/955/GCA_001420955.1_ASM142095v1	26679598	2009C-3133
Cobetia sp. MM1IDA2H-1	1268241	PRJEB17997	371760	Proteobacteria	Gammaproteobacteria	4.15518	62.2	-	FPLA01	105	3499	3374	2/8/17	4/17/17	Contig	Unversidad de Valparaiso	SAMEA4553727	GCA_900119965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/965/GCA_900119965.1_ADCOB	-	-
Lactobacillus lindneri DSM 20690 = JCM 11027	1122148	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.44261	34.1	-	JQBT01	36	1481	1362	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02797783	GCA_001438685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/685/GCA_001438685.1_ASM143868v1	26415554	DSM 20690
Escherichia coli	562	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	5.08516	50.8251	chromosome:NZ_CP021879.1/CP021879.1; plasmid tig00001069_pilon:NZ_CP021880.1/CP021880.1; plasmid tig00001145_pilon:NZ_CP021881.1/CP021881.1; plasmid tig00001287_pilon:NZ_CP021882.1/CP021882.1	-	4	5310	4864	6/20/17	6/22/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014978	GCA_002201835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/835/GCA_002201835.1_ASM220183v1	-	AR_0137
Lactobacillus pantheris DSM 15945 = JCM 12539 = NBRC 106106	1423783	PRJDB1354	231411	Terrabacteria group	Firmicutes	2.47866	52.8	-	BCVS01	197	2286	2220	2/27/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046915	GCA_001591865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/865/GCA_001591865.1_ASM159186v1	-	NBRC 106106
Lactobacillus equigenerosi	417373	PRJDB4330	305499	Terrabacteria group	Firmicutes	1.59446	42.7	-	BCMX01	84	1604	1493	12/8/15	4/11/17	Contig	Kyushu University	SAMD00042710	GCA_001570685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/685/GCA_001570685.1_ASM157068v1	26847890	NRIC 0697
Lactobacillus amylophilus DSM 20533 = JCM 1125	1423721	PRJDB799	243710	Terrabacteria group	Firmicutes	1.55261	43.5	-	BBBR01	31	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000418	GCA_001311665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/665/GCA_001311665.1_ASM131166v1	-	JCM 1125
Lactobacillus kefiri	33962	PRJNA375758	375758	Terrabacteria group	Firmicutes	2.55173	41.6	-	NDFJ01	251	2452	2292	8/29/17	8/30/17	Contig	SysMilk	SAMN06718476	GCA_002276775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/775/GCA_002276775.1_ASM227677v1	-	Olga
Methylomonas koyamae	702114	PRJNA315278	315278	Proteobacteria	Gammaproteobacteria	5.17924	55.9	-	LUUL01	147	4695	4497	5/16/16	4/12/17	Contig	Ghent University	SAMN04555168	GCA_001644095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/095/GCA_001644095.1_ASM164409v1	-	R-49807
Lactobacillus collinoides DSM 20515 = JCM 1123	1423733	PRJDB897	243774	Terrabacteria group	Firmicutes	3.56224	46.1	-	BBEQ01	114	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016806	GCA_001312845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/845/GCA_001312845.1_ASM131284v1	-	JCM 1123
Methylobacterium phyllosphaerae JCM 16408	1295137	PRJDB843	245940	Proteobacteria	Alphaproteobacteria	3.30011	66.2	-	BBDH01	2607	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000533	GCA_001312285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/285/GCA_001312285.1_ASM131228v1	-	JCM 16408
Kosakonia cowanii JCM 10956 = DSM 18146	1300165	PRJDB901	243778	Proteobacteria	Gammaproteobacteria	4.81003	56.2	-	BBEU01	108	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016805	GCA_001312885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/885/GCA_001312885.1_ASM131288v1	-	JCM 10956
Stenotrophomonas acidaminiphila	128780	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.50723	69	-	DBIQ01	43	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455917	GCA_002296645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/645/GCA_002296645.1_ASM229664v1	28894102	-
Phormidesmis priestleyi Ana	1666911	PRJNA283228	283228	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.92836	49.3	-	LJZR01	136	4905	4863	10/14/15	6/23/16	Scaffold	Pacific Northwest National Laboratroy	SAMN03785498	GCA_001314865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/865/GCA_001314865.1_ASM131486v1	26497460	-
Pseudomonas congelans	200452	PRJNA387592	387592	Proteobacteria	Gammaproteobacteria	5.56585	59.3	-	NQXZ01	167	5110	4542	9/20/17	9/22/17	Contig	Max Planck Institute 	SAMN07158963	GCA_002318645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/645/GCA_002318645.1_ASM231864v1	28880925	RMX815.1a
Vibrio hyugaensis	1534743	PRJDB3039	271954	Proteobacteria	Gammaproteobacteria	5.95033	45	-	BBLF01	214	5508	5193	1/7/15	4/10/17	Scaffold	University of Miyazaki	SAMD00019135	GCA_000818475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/475/GCA_000818475.1_ASM81847v1	25527835	151112A
Mycobacterium peregrinum	43304	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.79518	66.4	-	LZSO01	51	6514	6340	6/17/16	4/12/17	Contig	JCVI	SAMN04696154	GCA_001665785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/785/GCA_001665785.1_ASM166578v1	-	852002-51209_SCH5440388
Escherichia coli	562	PRJNA355857	355857	Proteobacteria	Gammaproteobacteria	4.85554	50.8245	chromosome:NZ_CP019560.1/CP019560.1; plasmid unnamed:NZ_CP019561.1/CP019561.1	-	2	5001	4663	6/2/17	6/5/17	Complete Genome	University of Guelph	SAMN06166007	GCA_002163935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/935/GCA_002163935.1_ASM216393v1	-	1031
Labrenzia alba	311410	PRJEB10040	297418	Proteobacteria	Alphaproteobacteria	6.89456	56.4	-	CXWA01	35	6371	6230	9/30/15	4/11/17	Contig	UVEG	SAMEA3495628	GCA_001404295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/295/GCA_001404295.1_L.albaCECT5094_Spades_Prokka	-	CECT 5094
Clostridium disporicum	84024	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.73975	27.9	-	CYYT01	110	3545	3366	10/1/15	4/11/17	Contig	SC	SAMEA3545235	GCA_001405575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/575/GCA_001405575.1_13414_6_11	-	2789STDY5608827
Fusicatenibacter saccharivorans	1150298	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.87867	47	-	CZAL01	75	3627	3410	10/1/15	4/11/17	Contig	SC	SAMEA3545349	GCA_001406335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/335/GCA_001406335.1_14207_7_8	-	2789STDY5834885
Clostridium ventriculi	1267	PRJDB4385	305500	Terrabacteria group	Firmicutes	2.47967	27.2	-	BCMW01	32	2346	2236	12/8/15	4/11/17	Contig	"Animal Science, Graduate School of Life and Environmental Sciences, Kyoto Prefectural University"	SAMD00043589	GCA_001485185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/185/GCA_001485185.1_ASM148518v1	26847899	17
Flavobacterium aquidurense	362413	PRJEB16573	349887	FCB group	Bacteroidetes/Chlorobi group	5.44043	34	-	FNPS01	29	4607	4493	10/22/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444397	GCA_900107365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/365/GCA_900107365.1_IMG-taxon_2693429908_annotated_assembly	-	DSM 18293
Candidatus Cloacimonas sp. 4484_143	1956164	PRJNA362212	362212	FCB group	Candidatus Cloacimonetes	1.4843	35.7	-	MVCU01	193	1456	1382	3/20/17	3/20/17	Scaffold	The University of Texas at Austin	SAMN06288066	GCA_002049835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/835/GCA_002049835.1_ASM204983v1	-	-
Methanosaeta sp. ASP1-2	1917476	PRJNA338276	338276	Euryarchaeota	Methanomicrobia	0.208261	55.4	-	NOLG01	68	276	276	8/16/17	8/16/17	Contig	The Ohio State University	SAMN05908753	GCA_002256645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/645/GCA_002256645.1_ASM225664v1	-	-
Lachnospira pectinoschiza	28052	PRJEB16225	348985	Terrabacteria group	Firmicutes	2.70431	36	-	FNHZ01	12	2331	2241	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216544	GCA_900103815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/815/GCA_900103815.1_IMG-taxon_2657245269_annotated_assembly	-	M83
Streptomyces pactum	68249	PRJNA293399	293399	Terrabacteria group	Actinobacteria	8.46636	72	-	LIQD01	43	7335	6803	10/27/15	3/14/17	Scaffold	Northwest A&F Unversity	SAMN04002534	GCA_001414545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/545/GCA_001414545.1_ASM141454v1	-	ACT12
Candidatus Symbiothrix dinenymphae	467085	PRJDB3425	293966	FCB group	Bacteroidetes/Chlorobi group	1.87807	45.6	-	BBRV01	1092	-	-	8/25/15	4/14/16	Contig	"Microbe Division (RIKEN BRC JCM), RIKEN BioResource Center"	SAMD00024444	GCA_001431105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/105/GCA_001431105.1_ASM143110v1	26079531	C9-6h
Mycobacterium gordonae	1778	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.92693	66.9	-	LZLK01	290	6312	5945	6/17/16	4/13/17	Contig	JCVI	SAMN05202166	GCA_001673255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/255/GCA_001673255.1_ASM167325v1	-	1245695.6
Nonlabens sp. YIK11	1453349	PRJNA282569	282569	FCB group	Bacteroidetes/Chlorobi group	3.26068	40.9	-	LBMJ01	2	2977	2896	10/26/15	4/11/17	Contig	Korea Institute of Ocean Science and Technology	SAMN03571528	GCA_001413925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/925/GCA_001413925.1_ASM141392v1	-	YIK11
Streptomyces diastatochromogenes	42236	PRJNA335797	335797	Terrabacteria group	Actinobacteria	10.5201	71	-	MCGQ01	242	9451	8906	8/7/17	8/9/17	Scaffold	University of Copenhagen	SAMN05462163	GCA_002242805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/805/GCA_002242805.1_ASM224280v1	-	DSM 40608
Duganella sp. Root198D2	1736489	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	6.54268	62.3	-	LMIC01	51	5980	5791	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155758	GCA_001428585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/585/GCA_001428585.1_Root198D2	26633631	Root198D2
Thermococcus thioreducens	277988	PRJEB16840	350961	Euryarchaeota	Thermococci	2.06711	53.5	-	FOIW01	3	2323	2218	10/29/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216170	GCA_900109425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/425/GCA_900109425.1_IMG-taxon_2654588132_annotated_assembly	-	OGL-20
Kocuria kristinae	37923	PRJNA278411	278411	Terrabacteria group	Actinobacteria	2.2159	71.8	-	LDRG01	249	2025	1836	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401335	GCA_001475915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/915/GCA_001475915.1_ASM147591v1	26793183	SA12
Streptomyces prasinopilosus	67344	PRJEB15726	347699	Terrabacteria group	Actinobacteria	7.12533	72.9	-	FMZK01	28	6325	5885	10/20/16	9/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216505	GCA_900101585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/585/GCA_900101585.1_IMG-taxon_2663762722_annotated_assembly	-	CGMCC 4.3504
Psychrobacillus sp. OK032	1884358	PRJEB16999	351105	Terrabacteria group	Firmicutes	4.38725	37	-	FOGY01	41	4352	4166	10/29/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05518872	GCA_900111345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/345/GCA_900111345.1_IMG-taxon_2690315620_annotated_assembly	-	OK032
Bordetella pseudohinzii	1331258	PRJNA310226	310226	Proteobacteria	Betaproteobacteria	4.52975	66.6	-	LRSP01	92	4270	4118	2/3/16	4/11/17	Contig	Pennsylvania State University	SAMN04448480	GCA_001548485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/485/GCA_001548485.1_ASM154848v1	-	228/11
Plantibacter sp. Leaf314	1736333	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.96176	69.7	-	LMOB01	3	3693	3603	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151723	GCA_001423185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/185/GCA_001423185.1_Leaf314	26633631	Leaf314
Agreia sp. Leaf244	1736305	PRJNA297956	297956	Terrabacteria group	Actinobacteria	4.02239	67.4	-	LMLX01	9	3798	3707	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151695	GCA_001422695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/695/GCA_001422695.1_Leaf244	26633631	Leaf244
Agromyces sp. Root1464	1736467	PRJNA297942	297942	Terrabacteria group	Actinobacteria	4.04282	70.1	-	LMFU01	3	3690	3597	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04155736	GCA_001427265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/265/GCA_001427265.1_Root1464	26633631	Root1464
Pseudorhodoferax sp. Leaf267	1736316	PRJNA297956	297956	Proteobacteria	Betaproteobacteria	6.53033	68.7	-	LMMV01	27	5965	5768	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151706	GCA_001422405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/405/GCA_001422405.1_Leaf267	26633631	Leaf267
Rathayibacter sp. Leaf299	1736328	PRJNA297956	297956	Terrabacteria group	Actinobacteria	4.01752	71.6	-	LMNT01	8	3772	3684	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151718	GCA_001423055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/055/GCA_001423055.1_Leaf299	26633631	Leaf299
Aureimonas sp. Leaf324	1736336	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.41525	68.1	-	LMOH01	30	4165	4034	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151726	GCA_001423245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/245/GCA_001423245.1_Leaf324	26633631	Leaf324
Phenylobacterium sp. Root700	1736591	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	4.57835	67.4	-	LMHT01	35	4389	4282	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155860	GCA_001429025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/025/GCA_001429025.1_Root700	26633631	Root700
Dyadobacter sp. 50-39	1895756	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	7.71906	50.2	-	MKSR01	48	6457	6335	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660534	GCA_001898145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/145/GCA_001898145.1_ASM189814v1	-	-
Geodermatophilus sp. DSM 44208	1550232	PRJEB17275	351475	Terrabacteria group	Actinobacteria	4.69005	75.5	-	FOWQ01	16	4495	4321	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660464	GCA_900115505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/505/GCA_900115505.1_IMG-taxon_2600255293_annotated_assembly	-	DSM 44208
Phycicoccus sp. Soil803	1736415	PRJNA298127	298127	Terrabacteria group	Actinobacteria	4.46972	70.5	-	LMST01	6	4143	4018	11/2/15	4/11/17	Scaffold	ETH Zurich	SAMN04155680	GCA_001429685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/685/GCA_001429685.1_Soil803	26633631	Soil803
Altererythrobacter sp. MH-B5	1172626	PRJNA262607	262607	Proteobacteria	Alphaproteobacteria	3.66844	60	-	JRQQ01	25	3475	3397	4/21/16	4/12/17	Contig	institue of urban environment	SAMN03084318	GCA_001625325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/625/325/GCA_001625325.1_ASM162532v1	26858132	MH-B5
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	4.99252	50.8244	chromosome:NZ_CP010242.1/CP010242.1; plasmid A:NZ_CP010243.1/CP010243.1; plasmid B:NZ_CP010244.1/CP010244.1; plasmid C:NZ_CP010245.1/CP010245.1	-	4	5171	4808	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252458	GCA_001901445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/445/GCA_001901445.1_ASM190144v1	-	S56
Stenotrophomonas pavanii	487698	PRJEB16042	348488	Proteobacteria	Gammaproteobacteria	4.424	67.2	-	FNFQ01	17	4064	3935	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487784	GCA_900101175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/175/GCA_900101175.1_IMG-taxon_2623620583_annotated_assembly	-	LMG 25348
Curvibacter sp. GWA2_64_110	1797747	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	3.39855	64.2	-	MGPC01	41	3285	3178	10/20/16	10/21/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN04314114	GCA_001797315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/797/315/GCA_001797315.1_ASM179731v1	27774985	-
Ferrovum sp. PN-J185	1356306	PRJNA305480	305480	Proteobacteria	Betaproteobacteria	1.88924	39.9	-	LQZA01	6	1885	1795	3/8/16	4/12/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04325952	GCA_001581925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/925/GCA_001581925.1_ASM158192v1	-	PN-J185
Lactobacillus parabuchneri	152331	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.59514	43.5	-	JQBJ01	174	2442	2310	11/6/15	4/4/17	Scaffold	Shanghai Majorbio	SAMN02797773	GCA_001437335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/335/GCA_001437335.1_ASM143733v1	26415554	DSM 15352
Lactobacillus taiwanensis	508451	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.23288	34.1	-	NGNW01	152	2320	2058	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848434	GCA_002253045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/045/GCA_002253045.1_ASM225304v1	-	609r
Lactobacillus aviarius	1606	PRJNA316009	316009	Terrabacteria group	Firmicutes	1.61487	40.1	-	LVKG01	63	1563	1472	5/25/16	4/5/17	Contig	University of Minnesota	SAMN04573025	GCA_001652025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/025/GCA_001652025.1_ASM165202v1	-	UMNLAv5
Lactobacillus parakefiri	152332	PRJDB4955	386281	Terrabacteria group	Firmicutes	2.49341	43.6	-	BDGB01	161	2446	2175	5/9/17	8/8/17	Scaffold	"National Agriculture and Food Research Organization, Institute of Livestock and Grassland Science"	SAMD00054186	GCA_002157585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/585/GCA_002157585.1_ASM215758v1	28748134	JCM 8573
Acidimicrobium sp. BACL17 MAG-120823-bin42	1655575	PRJNA273799	273799	Terrabacteria group	Actinobacteria	1.35243	52.2	-	LIAZ01	255	1530	1284	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741960	GCA_001438985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/985/GCA_001438985.1_ASM143898v1	-	-
Escherichia coli JJ1887	1355101	PRJNA311313	311313	Proteobacteria	Gammaproteobacteria	5.33152	50.8177	chromosome:NZ_CP014316.1/CP014316.1; plasmid pJJ1887-1:NZ_CP014317.1/CP014317.1; plasmid pJJ1887-2:NZ_CP014318.1/CP014318.1; plasmid pJJ1887-3:NZ_CP014319.1/CP014319.1; plasmid pJJ1887-4:NZ_CP014321.1/CP014321.1; plasmid pJJ1887-5:NZ_CP014320.1/CP014320.1	-	6	5615	5220	3/17/16	2/25/17	Complete Genome	Translational Genomics Research Institute	SAMN04481707	GCA_001593565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/565/GCA_001593565.1_ASM159356v1	27174264	JJ1887
Bradyrhizobium lablabi	722472	PRJEB18281	355707	Proteobacteria	Alphaproteobacteria	7.9101	61.8	chromosome I:NZ_LT670844.1/LT670844.1	-	1	7440	7241	12/2/16	3/18/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05444159	GCA_900141755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/755/GCA_900141755.1_IMG-taxon_2698536816_annotated_assembly	-	GAS499
Roseovarius indicus	540747	PRJEB17230	351440	Proteobacteria	Alphaproteobacteria	6.09933	64.4	-	FOMY01	56	5949	5758	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488031	GCA_900112725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/725/GCA_900112725.1_IMG-taxon_2619618997_annotated_assembly	-	DSM 26383
Alishewanella sp. 34-51-39	1970316	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	2.88207	50.9	-	NCJW01	398	2950	2580	8/16/17	8/16/17	Scaffold	None	SAMN06622206	GCA_002278995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/995/GCA_002278995.1_ASM227899v1	-	-
Candidatus Kryptobacter tengchongensis	1643429	PRJEB11719	301868	FCB group	Candidatus Kryptonia	1.69728	36.4	-	CZVH01	109	1641	1471	11/11/15	4/4/17	Scaffold	DOE - Joint Genome Institute	SAMN03436132	GCA_001458555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/555/GCA_001458555.1_JGI_assembly	-	JGI-20
Lysobacter enzymogenes	69	PRJNA360559	360559	Proteobacteria	Gammaproteobacteria	6.35534	69.9	-	MTAY01	192	5093	4918	3/9/17	5/8/17	Scaffold	Futureco Bioscience	SAMN06212355	GCA_002024615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/615/GCA_002024615.1_ASM202461v1	-	B25
Bacillus glycinifermentans	1664069	PRJNA285749	285749	Terrabacteria group	Firmicutes	4.50587	46	-	LECV01	203	4752	3937	6/29/15	4/10/17	Contig	NCAUR-ARS-USDA	SAMN03759629	GCA_001042465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/465/GCA_001042465.1_ASM104246v1	-	KJ-17
Nitrosomonas ureae	44577	PRJEB16496	349420	Proteobacteria	Betaproteobacteria	3.23835	44.4	-	FNLN01	94	3051	2835	10/21/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216406	GCA_900105875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/875/GCA_900105875.1_IMG-taxon_2671180029_annotated_assembly	-	Nm10
Mycobacterium saopaulense	1578165	PRJNA347845	347845	Terrabacteria group	Actinobacteria	4.99726	64.5	-	MLIH01	38	5047	4855	10/26/16	4/13/17	Contig	University of Georgia	SAMN05897989	GCA_001853765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/765/GCA_001853765.1_ASM185376v1	-	8528
Escherichia coli	562	PRJEB18462	383693	Proteobacteria	Gammaproteobacteria	5.00889	50.8149	chromosome WI1:NZ_LT838196.1/LT838196.1; plasmid pWI1-KPC3:NZ_LT838197.1/LT838197.1; plasmid pWI1-incFII:NZ_LT838198.1/LT838198.1; plasmid pWI1-incI1:NZ_LT838199.1/LT838199.1	-	4	5214	4888	4/20/17	5/1/17	Complete Genome	CHU Clermont-ferrand	SAMEA19195168	GCA_900174625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/625/GCA_900174625.1_WI1-reUpload	-	-
Thalassobius mediterraneus	340021	PRJEB10711	301520	Proteobacteria	Alphaproteobacteria	4.42612	59.8	-	CYSC01	47	4287	4120	11/8/15	4/11/17	Contig	UVEG	SAMEA3531501	GCA_001458275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/275/GCA_001458275.1_T.mediterraneus_CECT5120_Seqman_Prokka	-	CECT 5120
Nitrospira sp. SCGC AG-212-E16	1799664	PRJNA311679	311679	Nitrospirae	Nitrospira	2.31462	56	-	LSTC01	162	2293	2094	5/16/16	5/16/16	Contig	Iowa State University	SAMN04490952	GCA_001644405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/405/GCA_001644405.1_ASM164440v1	-	SCGC AG-212-E16
Enterobacter kobei	208224	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.39448	54.3	-	JZYS01	128	5393	5164	3/19/15	4/3/17	Contig	JCVI	SAMN03283662	GCA_000957175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/175/GCA_000957175.1_ASM95717v1	-	35730
Fluoribacter gormanii	464	PRJEB18894	360761	Proteobacteria	Gammaproteobacteria	3.81312	38.1	-	FTNL01	54	3354	3213	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421777	GCA_900156395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/395/GCA_900156395.1_IMG-taxon_2681812897_annotated_assembly	-	ATCC 33342
Legionella jamestowniensis DSM 19215	1122163	PRJEB17475	351676	Proteobacteria	Gammaproteobacteria	3.40971	39.4	-	FOTZ01	15	3031	2940	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02746073	GCA_900114725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/725/GCA_900114725.1_IMG-taxon_2600255316_annotated_assembly	-	DSM 19215
Escherichia coli	562	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	5.07825	50.8127	chromosome:NZ_CP021736.1/CP021736.1; plasmid tig00000255:NZ_CP021737.1/CP021737.1; plasmid tig00000260:NZ_CP021738.1/CP021738.1; plasmid tig00002897alt:NZ_CP021739.1/CP021739.1	-	4	5284	4877	6/13/17	6/15/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014991	GCA_002192295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/295/GCA_002192295.1_ASM219229v1	-	AR_0150
Enterobacter xiangfangensis	1296536	PRJNA278428	278428	Proteobacteria	Gammaproteobacteria	4.71212	55.4	-	LDQN01	129	4545	4312	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401400	GCA_001475635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/635/GCA_001475635.1_ASM147563v1	26793183	NS29
Halothiobacillus sp. WRN-7	1781069	PRJNA309017	309017	Proteobacteria	Gammaproteobacteria	2.29285	66.2	-	LRFH01	18	2112	2050	5/10/16	4/12/17	Contig	"Agricultural Culture Collection of China (ACCC), Institute of Agricultural Resources and Regional Planning"	SAMN04419354	GCA_001641825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/825/GCA_001641825.1_WRN-7	-	WRN-7
Exiguobacterium indicum HHS 31	1358421	PRJNA211970	211970	Terrabacteria group	Firmicutes	3.24497	46.6	-	MPSZ01	23	3337	3249	1/6/17	4/16/17	Contig	Centre for Cellular and Molecular Biology	SAMN03159272	GCA_001939065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/065/GCA_001939065.1_ASM193906v1	-	HHS 31
Acinetobacter seifertii	1530123	PRJNA79045	79045	Proteobacteria	Gammaproteobacteria	3.90066	38.5	-	APCT01	203	3828	3473	5/18/17	5/24/17	Contig	National Taiwan University Hospital	SAMN06921013	GCA_002148925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/925/GCA_002148925.1_AP_C917_1.0	-	C917
Myroides marinus	703342	PRJEB16806	350940	FCB group	Bacteroidetes/Chlorobi group	4.15831	33.6	-	FNYS01	54	3764	3602	10/29/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488018	GCA_900109075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/075/GCA_900109075.1_IMG-taxon_2615840711_annotated_assembly	-	DSM 23048
Shigella boydii 5216-82	766141	PRJNA49061	49061	Proteobacteria	Gammaproteobacteria	4.88245	50.8	-	AFGE01	75	5256	4384	5/4/11	7/7/17	Contig	Institute for Genome Sciences	SAMN00792438	GCA_000211975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/211/975/GCA_000211975.2_ASM21197v2	-	5216-82
Acetobacter senegalensis	446692	PRJNA253128	253128	Proteobacteria	Alphaproteobacteria	4.04783	55.7	-	JOOZ01	235	3720	3507	5/24/17	5/26/17	Contig	Cornell University	SAMN02866228	GCA_002156945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/945/GCA_002156945.1_ASM215694v1	-	DmL_050
Pelotomaculum sp. UBA1371	1947063	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.43482	49.7	-	DBRJ01	70	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452617	GCA_002305915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/915/GCA_002305915.1_ASM230591v1	28894102	-
Syntrophothermus sp. UBA1445	1947645	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.27989	50.7	-	DCTH01	259	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451867	GCA_002329495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/495/GCA_002329495.1_ASM232949v1	28894102	-
Caldivirga sp. JCHS_4	1714254	PRJNA295311	295311	TACK group	Crenarchaeota	1.35471	48.2	-	LOCD01	165	1519	1091	1/15/16	1/15/16	Scaffold	Montana State University	SAMN04045691	GCA_001515815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/815/GCA_001515815.1_ASM151581v1	-	-
Lutibacter sp. UBA4458	1946768	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.47369	28.9	-	DGOU01	263	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457462	GCA_002390165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/165/GCA_002390165.1_ASM239016v1	28894102	-
Halobacterium hubeiense	1407499	PRJEB8631	319516	Euryarchaeota	Halobacteria	3.23748	66.4	-	CEMO01	10	3383	3177	4/24/16	7/28/17	Scaffold	UH	SAMEA3268805	GCA_900003515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/003/515/GCA_900003515.1_ASM90000351v1	-	JI20-2
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.02396	66.7	-	LOTI01	87	6527	6245	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449144	GCA_001521925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/925/GCA_001521925.1_ASM152192v1	-	RF23-BP82
Acidibacillus ferrooxidans	1765683	PRJNA304017	304017	Terrabacteria group	Firmicutes	3.20219	52	-	LVKL01	162	3273	3053	3/30/16	4/12/17	Contig	Redox	SAMN04493492	GCA_001602485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/485/GCA_001602485.1_ASM160248v1	-	SLC66
Bacillus halotolerans	260554	PRJNA306582	306582	Terrabacteria group	Firmicutes	4.09146	43.8	-	LPVD01	25	4125	3903	1/19/16	9/5/17	Contig	NCAUR-ARS-USDA	SAMN04357113	GCA_001517115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/115/GCA_001517115.1_ASM151711v1	27030978	NRRL B-41617
Elizabethkingia genomosp. 3	1756149	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	4.21084	35.8	-	MAHG01	28	3838	3750	3/8/17	3/10/17	Contig	CDC	SAMN05256516	GCA_002023545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/545/GCA_002023545.1_ASM202354v1	-	CSID_3000516589
Burkholderia diffusa	488732	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.80902	66.7	-	LOUS01	68	6246	5959	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449181	GCA_001523065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/065/GCA_001523065.1_ASM152306v1	-	INT4-BP16
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.79982	67.4	-	LOVT01	111	7118	6728	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449210	GCA_001523845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/845/GCA_001523845.1_ASM152384v1	-	ABCPW-33
Burkholderia pseudomultivorans	1207504	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.80053	67.5	-	LOUU01	130	7134	6830	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449183	GCA_001523165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/165/GCA_001523165.1_ASM152316v1	-	SUB-INT22-BP1
Burkholderia anthina	179879	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.3901	67.2	-	LOXV01	64	6862	6495	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449278	GCA_001524815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/815/GCA_001524815.1_ASM152481v1	-	MSMB0849
Candidatus Kryptonium thompsoni	1633631	PRJEB11711	301860	FCB group	Candidatus Kryptonia	2.3487	37.4	-	CZVI01	91	2195	2029	11/11/15	4/11/17	Scaffold	DOE - Joint Genome Institute	SAMN03435926	GCA_001535965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/965/GCA_001535965.1_JGI_assembly	-	JGI-8
Elizabethkingia genomosp. 4	1756150	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	4.13409	35.7	-	MAHB01	13	3752	3675	3/8/17	3/10/17	Contig	CDC	SAMN05255125	GCA_002023405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/405/GCA_002023405.1_ASM202340v1	-	CSID_3000516135
Vibrio toranzoniae	1194427	PRJNA356504	356504	Proteobacteria	Gammaproteobacteria	4.58489	43.8	-	MRTB01	139	4103	3963	2/13/17	2/22/17	Contig	Universidad de Santiago de Compostela	SAMN06115650	GCA_001995825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/825/GCA_001995825.1_ASM199582v1	-	R17
Streptomyces thermoautotrophicus	1469144	PRJNA274408	274408	Terrabacteria group	Actinobacteria	4.72654	70.5	-	JYIK01	1124	4704	3877	2/1/16	3/12/17	Contig	Harvard Medical School	SAMN03328325	GCA_001543915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/915/GCA_001543915.1_ASM154391v1	-	UBT1
Paracoccus aminovorans	34004	PRJEB17339	351492	Proteobacteria	Alphaproteobacteria	3.9462	67.5	-	FOPU01	93	3839	3572	10/31/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04488021	GCA_900113565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/565/GCA_900113565.1_IMG-taxon_2615840720_annotated_assembly	-	DSM 8537
Porphyrobacter donghaensis	267135	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	3.93091	64.3	-	LSIP01	1261	4098	3365	2/10/16	4/4/17	Contig	Georgia Institute of Technology	SAMN04299440	GCA_001556315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/315/GCA_001556315.1_ASM155631v1	-	CCH19-E1
Photobacterium aquimaris	512643	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.38218	39.8	-	LZEZ01	84	3934	3636	6/24/16	4/13/17	Contig	FDA/CFSAN	SAMN04507559	GCA_001676075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/075/GCA_001676075.1_ASM167607v1	-	GCSL-P86
Amycolatopsis regifaucium	546365	PRJNA307072	307072	Terrabacteria group	Actinobacteria	8.27302	68.5	-	LQCI01	52	7668	7375	4/7/16	4/12/17	Scaffold	Institute of Microbial Technology	SAMN04371273	GCA_001613935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/935/GCA_001613935.1_ASM161393v1	-	GY080
Lysinimicrobium aestuarii	1638982	PRJDB3045	262019	Terrabacteria group	Actinobacteria	2.96686	72.3	-	BBLX01	22	2799	2727	4/1/15	4/10/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00019181	GCA_000971155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/155/GCA_000971155.1_ASM97115v1	26354549	NBRC 109392
Lysinimicrobium rhizosphaerae	1638985	PRJDB3045	262019	Terrabacteria group	Actinobacteria	3.05429	72.4	-	BBMH01	19	2854	2764	4/1/15	4/10/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00019191	GCA_000971455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/455/GCA_000971455.1_ASM97145v1	26354549	NBRC 110050
Paenibacillus amylolyticus	1451	PRJNA343020	343020	Terrabacteria group	Firmicutes	7.03036	45.8	-	MRTI01	36	6156	6040	1/18/17	4/17/17	Contig	Cornell University	SAMN05929612	GCA_001956035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/035/GCA_001956035.1_ASM195603v1	-	FSL H7-0692
Christensenella minuta	626937	PRJNA326054	326054	Terrabacteria group	Firmicutes	2.94023	51.5	-	MAIR01	41	2833	2732	7/4/16	4/13/17	Scaffold	BGI-shenzhen	SAMN05257106	GCA_001678855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/855/GCA_001678855.1_ASM167885v1	-	DSM 22607
uncultured Clostridia bacterium	244328	PRJEB10932	303149	Terrabacteria group	Firmicutes	2.16785	53.8	-	FIZJ01	71	-	-	2/12/16	2/12/16	Scaffold	Center for Microbial Communities	SAMEA3730007	GCA_900019385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/385/GCA_900019385.1_Clostridia_bin_genome_4	-	-
Enterobacter cloacae 'Hoffmann cluster IV' MGH 34	1329832	PRJNA201949	201949	Proteobacteria	Gammaproteobacteria	5.07889	55.9	-	AYJA01	3	4928	4684	10/30/13	4/20/17	Scaffold	Broad Institute	SAMN02138574	GCA_000492895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/895/GCA_000492895.1_Ente_cloa_complex_MGH_34_V1	-	MGH 34
Tsukamurella tyrosinosolvens	57704	PRJNA311104	311104	Terrabacteria group	Actinobacteria	4.9461	71	-	LSRG01	28	4806	4688	2/26/16	4/12/17	Contig	The University of Hong Kong	SAMN04457857	GCA_001575225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/225/GCA_001575225.1_ASM157522v1	-	JCM 15482
Tsukamurella pulmonis	47312	PRJNA311102	311102	Terrabacteria group	Actinobacteria	4.5926	71	-	LSRI01	48	4439	4310	2/26/16	4/12/17	Contig	The University of Hong Kong	SAMN04457855	GCA_001575215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/215/GCA_001575215.1_ASM157521v1	-	DSM 44990
Methanohalophilus sp. 2-GBenrich	1884871	PRJNA308326	308326	Euryarchaeota	Methanomicrobia	1.88578	42.2	-	MCNQ01	23	1980	1980	9/14/16	9/14/16	Contig	The Ohio State University	SAMN05172267	GCA_001726015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/015/GCA_001726015.1_ASM172601v1	-	-
Corynebacterium simulans	146827	PRJNA279605	279605	Terrabacteria group	Actinobacteria	2.65323	59.2	-	LTEB01	66	2523	2373	3/2/16	4/12/17	Contig	NHGRI	SAMN03455924	GCA_001579275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/275/GCA_001579275.1_ASM157927v1	26861018	1B08
Escherichia coli	562	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	5.10349	50.8096	chromosome:NZ_CP021689.1/CP021689.1; plasmid tig00007555j7554:NZ_CP021690.1/CP021690.1	-	2	5352	4986	6/8/17	6/10/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014899	GCA_002180195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/195/GCA_002180195.1_ASM218019v1	-	AR_0058
Acetobacter cerevisiae	178900	PRJNA288385	288385	Proteobacteria	Alphaproteobacteria	3.32358	57.7	-	LIAA01	108	2954	2764	3/7/16	4/12/17	Contig	Ghent University	SAMN03799303	GCA_001581105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/105/GCA_001581105.1_ASM158110v1	-	LMG 1545
Gluconobacter japonicus	376620	PRJNA288385	288385	Proteobacteria	Alphaproteobacteria	3.13986	56.1	-	LHZK01	128	2985	2822	3/7/16	4/12/17	Contig	Ghent University	SAMN03799281	GCA_001580785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/785/GCA_001580785.1_ASM158078v1	-	LMG 1373
Halanaerobium sp. MDAL1	1898548	PRJNA341965	341965	Terrabacteria group	Firmicutes	2.32569	34.3	-	MIJU01	129	2197	2102	9/19/16	9/19/16	Contig	University of Pittsburgh	SAMN05730905	GCA_001730715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/715/GCA_001730715.1_ASM173071v1	-	-
Gluconobacter albidus	318683	PRJNA288385	288385	Proteobacteria	Alphaproteobacteria	3.6612	59.7	-	LHZR01	114	3526	3344	3/7/16	4/12/17	Contig	Ghent University	SAMN03799289	GCA_001580925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/925/GCA_001580925.1_ASM158092v1	-	LMG 1768
Brevibacterium ravenspurgense 5401308 = CCUG 53855	1176165	PRJNA305115	305115	Terrabacteria group	Actinobacteria	2.36555	62.3	-	LPXX01	22	2171	2074	3/9/16	4/12/17	Contig	Public Health Agency of Canada	SAMN04317116	GCA_001584405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/405/GCA_001584405.1_ASM158440v1	-	CCUG 53855
Polynucleobacter sp. MWH-Adler-W8	1819727	PRJNA295639	295639	Proteobacteria	Betaproteobacteria	2.20739	45.5	-	LZFI01	24	2245	2175	12/6/16	4/16/17	Contig	University of Innsbruck	SAMN04086674	GCA_001889925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/925/GCA_001889925.1_ASM188992v1	27836842	MWH-Adler-W8
Planococcus maritimus	192421	PRJNA313006	313006	Terrabacteria group	Firmicutes	3.25164	47.3	-	LTZG01	69	3217	3127	3/15/16	4/12/17	Contig	Madurai Kamaraj University	SAMN04511041	GCA_001592825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/825/GCA_001592825.1_ASM159282v1	-	MKU009
Edwardsiella anguillarum ET070829	1436301	PRJNA231705	231705	Proteobacteria	Gammaproteobacteria	4.28636	58.4	-	JABY01	121	4015	3729	12/18/14	4/10/17	Contig	East China University of Science and Technology	SAMN02568608	GCA_000804595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/595/GCA_000804595.1_ASM80459v1	25466920	ET070829
Pseudomonas koreensis	198620	PRJEB15748	347679	Proteobacteria	Gammaproteobacteria	6.12391	60.5	chromosome I:NZ_LT629687.1/LT629687.1	-	1	5614	5439	10/20/16	4/13/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04490189	GCA_900101415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/415/GCA_900101415.1_IMG-taxon_2636416187_annotated_assembly	-	BS3658
Planctomyces sp. SCGC AG-212-M04	1799657	PRJNA311679	311679	PVC group	Planctomycetes	2.3142	62.1	-	LSTH01	237	1993	1774	5/16/16	5/16/16	Contig	Iowa State University	SAMN04490957	GCA_001644265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/265/GCA_001644265.1_ASM164426v1	-	SCGC AG-212-M04
Arcobacter lanthieri	1355374	PRJNA235327	235327	Proteobacteria	delta/epsilon subdivisions	2.23621	26.4	-	JATO01	27	2240	2170	4/23/14	4/9/17	Scaffold	Agriculture and Agri-Food Canada	SAMN02732399	GCA_000648635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/635/GCA_000648635.1_Arcobacter_lanthierii_AF1430	"2,483,114,325,977,280"	AF1430
Streptobacillus notomytis	1712031	PRJNA294926	294926	Fusobacteria	Fusobacteriia	1.73266	27.9	-	LJRV01	823	1507	1368	4/7/16	4/12/17	Scaffold	Robert Koch Institute	SAMN04038436	GCA_001612575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/575/GCA_001612575.1_ASM161257v1	26438009	AHL 370-1
Amycolatopsis keratiniphila subsp. nogabecina	208442	PRJNA307631	307631	Terrabacteria group	Actinobacteria	9.39978	68.9	-	MQUP01	68	8708	8484	1/18/17	4/17/17	Scaffold	Institute of Microbial Technology	SAMN04384053	GCA_001953855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/855/GCA_001953855.1_ASM195385v1	-	FH 1893
Candidatus Thioglobus sp. REDSEA-S12_B1	1811594	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	1.60648	38.3	-	LURN01	77	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534668	GCA_001628405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/405/GCA_001628405.1_ASM162840v1	27377622	-
Nitrosopelagicus sp. REDSEA-S43_B1	1811589	PRJNA289734	289734	TACK group	Thaumarchaeota	0.980468	33.9	-	LUPE01	115	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534606	GCA_001627015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/015/GCA_001627015.1_ASM162701v1	27377622	-
Bacillus encimensis	1414647	PRJNA373948	373948	Terrabacteria group	Firmicutes	3.9632	44	-	MWMM01	60	3991	3829	6/8/17	6/14/17	Scaffold	CSIR- National Chemical Laboratory	SAMN06319182	GCA_002189605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/605/GCA_002189605.1_ASM218960v1	25678682	DSM 28241
Hydrotalea flava	714549	PRJEB14091	329620	FCB group	Bacteroidetes/Chlorobi group	1.75213	36.8	-	FLNQ01	125	1628	1484	7/19/16	4/5/17	Contig	FIOCRUZ-MG	SAMEA4028673	GCA_900089545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/545/GCA_900089545.1_B16	-	-
Paenibacillus glucanolyticus	59843	PRJNA343020	343020	Terrabacteria group	Firmicutes	7.12818	48	-	MRTT01	118	6527	6324	1/18/17	4/17/17	Contig	Cornell University	SAMN05929625	GCA_001955865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/865/GCA_001955865.1_ASM195586v1	-	FSL R5-0817
bacterium 2013Ark19i	1561004	PRJEB7439	304961	unclassified Bacteria	unclassified Bacteria (miscellaneous)	2.44375	38.4	-	FKIH01	110	1601	1481	4/7/16	8/1/17	Scaffold	Functional Genomics Genter Zurich	SAMEA2826841	GCA_900078755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/755/GCA_900078755.1_2013Arg22	-	2013Arg22
Oleiphilus sp. HI0080	1822255	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	3.938	47.5	-	LWFU01	1249	3812	3258	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580794	GCA_001635135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/135/GCA_001635135.1_ASM163513v1	-	HI0080
Thalassolituus sp. UBA883	1947670	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.86824	51.7	-	DBFJ01	395	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457648	GCA_002294295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/295/GCA_002294295.1_ASM229429v1	28894102	-
Trichococcus sp. UBA802	1947762	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.81883	47.2	-	DBIM01	183	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451077	GCA_002296925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/925/GCA_002296925.1_ASM229692v1	28894102	-
Achromobacter ruhlandii	72557	PRJNA295291	295291	Proteobacteria	Betaproteobacteria	6.2895	67.9	-	LVKP01	90	5762	5544	5/4/16	4/12/17	Contig	Universidade do Estado do Rio de Janeiro	SAMN04045431	GCA_001637095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/095/GCA_001637095.1_ASM163709v1	-	8173
Paenibacillus macquariensis	948756	PRJEB18892	360759	Terrabacteria group	Firmicutes	6.26323	40.7	-	FTNK01	72	5862	5528	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421578	GCA_900156375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/375/GCA_900156375.1_IMG-taxon_2681812895_annotated_assembly	-	ATCC 23464
Capnocytophaga canis	1848903	PRJEB8047	270926	FCB group	Bacteroidetes/Chlorobi group	2.71155	35.5	-	CDOL01	293	2378	2197	1/20/15	4/10/17	Contig	"BIOZENTRUM, UNIVERSITY OF BASEL"	SAMEA3180120	GCA_000827715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/827/715/GCA_000827715.1_CcanD93.1	-	CcD93
Marinomonas gallaica	1806667	PRJEB14356	329205	Proteobacteria	Gammaproteobacteria	3.82604	45.3	-	FLRB01	36	3635	3479	7/16/16	4/13/17	Scaffold	UVEG	SAMEA4029001	GCA_900089985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/985/GCA_900089985.1_MgallaicaCECT5116_Velvet_Prokka	-	CECT 5116
Escherichia coli	562	PRJNA308372	308372	Proteobacteria	Gammaproteobacteria	4.9808	50.8073	chromosome:NZ_CP014197.1/CP014197.1; plasmid pColE1-MRE600:NZ_CP014198.2/CP014198.2; plasmid pMRE600-1:NZ_CP014199.1/CP014199.1; plasmid pMRE600-2:NZ_CP014200.1/CP014200.1	-	4	5415	4583	1/29/16	8/8/17	Complete Genome	Weill Cornell Medical College	SAMN04395032	GCA_001542675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/675/GCA_001542675.2_ASM154267v2	26802429	MRE600
Eikenella sp. HMSC073A11	1739535	PRJNA300186	300186	Proteobacteria	Betaproteobacteria	2.19983	55.6	-	LTST01	39	2150	2029	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480449	GCA_001815545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/545/GCA_001815545.1_ASM181554v1	-	HMSC073A11
Vibrio ishigakensis	1481914	PRJDB1678	251705	Proteobacteria	Gammaproteobacteria	4.78364	46.1	-	BBSC01	33	6208	6153	1/22/15	6/16/16	Contig	The University of Tokyo	SAMD00017313	GCA_000830475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/475/GCA_000830475.1_ASM83047v1	-	JCM19241
Enterococcus thailandicus	417368	PRJNA270385	270385	Terrabacteria group	Firmicutes	2.77386	36.6	-	JXLE01	58	2591	2502	11/25/16	4/16/17	Contig	Inner Mongolia Agricultural University	SAMN03267187	GCA_001886265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/265/GCA_001886265.1_ASM188626v1	-	DSM 21767
Rhizobium bangladeshense	1138189	PRJNA321136	321136	Proteobacteria	Alphaproteobacteria	6.61008	60.9	-	LYPN01	51	6423	6082	6/13/16	4/12/17	Contig	University of Minnesota	SAMN04966277	GCA_001662125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/125/GCA_001662125.1_ASM166212v1	-	1024
Escherichia coli	562	PRJNA316786	316786	Proteobacteria	Gammaproteobacteria	5.04091	50.805	chromosome:NZ_CP015074.2/CP015074.2; plasmid pEC745_OXA48:NZ_CP015075.2/CP015075.2	-	2	5207	4866	4/11/16	2/25/17	Complete Genome	University of Oxford	SAMN04590095	GCA_001618345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/345/GCA_001618345.2_ASM161834v2	-	Ecol_745
Romboutsia sp. MT17	1720299	PRJEB12936	314377	Terrabacteria group	Firmicutes	2.95367	28	-	FJTZ01	12	2880	2733	3/6/16	8/1/17	Contig	URMITE	SAMEA3888368	GCA_900074625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/625/GCA_900074625.1_PRJEB12936	-	MT17
Paraburkholderia tropica	92647	PRJEB16812	350985	Proteobacteria	Betaproteobacteria	8.58017	64.8	-	FNZM01	61	7584	7357	10/29/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216550	GCA_900109265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/265/GCA_900109265.1_IMG-taxon_2654587898_annotated_assembly	-	LMG 22274
Gallibacterium genomosp. 3	505345	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.26125	37.1	-	JTJS01	160	2118	1996	7/2/16	4/13/17	Contig	University of Copenhagen	SAMN03220406	GCA_001678635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/635/GCA_001678635.1_Gal31	-	F298
Mycobacterium szulgai	1787	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.53434	66.1	-	LZLW01	244	5345	4959	6/17/16	4/13/17	Contig	JCVI	SAMN04634195	GCA_001673455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/455/GCA_001673455.1_ASM167345v1	-	1146974.2
Mycobacterium scrofulaceum	1783	PRJNA354248	354248	Terrabacteria group	Actinobacteria	6.17027	68.4	-	MVIJ01	184	5840	5541	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064259	GCA_002086735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/735/GCA_002086735.1_ASM208673v1	-	DSM 43992
Gallibacterium salpingitidis	505341	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.64559	37.3	-	JTJU01	110	2501	2358	7/2/16	4/13/17	Contig	University of Copenhagen	SAMN03220413	GCA_001678555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/555/GCA_001678555.1_Gal33	-	18469/18
Moraxella nonliquefaciens	478	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.19456	42.2	-	LZDN01	43	2074	1946	7/5/16	4/13/17	Scaffold	TAILORED-Treatment project	SAMN05214262	GCA_001679155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/155/GCA_001679155.1_ASM167915v1	-	CCUG 60284
Thermosipho sp. 1074	1643331	PRJNA231770	231770	Thermotogae	Thermotogae	1.78831	31.4	-	LBEX01	20	1847	1777	2/13/17	4/17/17	Contig	University of Oslo	SAMN03483419	GCA_001999655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/655/GCA_001999655.1_ASM199965v1	-	1074
Serinicoccus sp. CNJ-927	1904970	PRJNA344658	344658	Terrabacteria group	Actinobacteria	3.43806	72.1	-	MKKF01	52	3308	2939	1/11/17	4/16/17	Scaffold	"Scripps Institution of Oceanography, UCSD"	SAMN05830214	GCA_001942435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/435/GCA_001942435.1_ASM194243v1	27902408	CNJ-927
Burkholderia stabilis	95485	PRJDB4654	325620	Proteobacteria	Betaproteobacteria	7.96894	66.4	-	BDCP01	4	7279	6907	6/9/16	4/13/17	Scaffold	National Institute of Advanced Industrial Science and Technology (AIST)	SAMD00048841	GCA_001685505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/505/GCA_001685505.1_ASM168550v1	-	LA20W
Mycobacterium malmoense	1780	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.87249	68.7	-	MBEB01	621	5790	5072	7/15/16	4/13/17	Contig	JCVI	SAMN05202171	GCA_001686725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/725/GCA_001686725.1_ASM168672v1	-	E826
Lachnoclostridium sp. An196	1965583	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.25262	50	-	NFJZ01	31	3235	3063	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473657	GCA_002160135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/135/GCA_002160135.1_ASM216013v1	-	An196
Ruminiclostridium sp. UBA3577	1947400	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.89303	41.9	-	DFNC01	104	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455822	GCA_002375885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/885/GCA_002375885.1_ASM237588v1	28894102	-
Aliivibrio sp. 1S128	1840085	PRJNA318805	318805	Proteobacteria	Gammaproteobacteria	4.32026	38.6	-	MAJV01	189	3910	3750	7/21/16	4/13/17	Scaffold	Massachusetts Institute of Technology	SAMN04867930	GCA_001691065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/065/GCA_001691065.1_ASM169106v1	-	1S128
Vibrio cidicii	1763883	PRJNA304180	304180	Proteobacteria	Gammaproteobacteria	4.67961	47.9	-	LOBP01	216	4440	4180	3/25/16	4/12/17	Contig	University of Alberta	SAMN04296642	GCA_001597955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/955/GCA_001597955.1_ASM159795v1	-	1048-83
Xanthomonas cannabis pv. cannabis	1885894	PRJNA266587	266587	Proteobacteria	Gammaproteobacteria	4.83747	65.6	-	JSZF01	260	4259	3927	12/16/14	4/10/17	Contig	Institut de Recherche pour le Developpement	SAMN03164132	GCA_000802405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/405/GCA_000802405.1_NCPPB3753_E1.0	26136759	NCPPB 3753
Gilliamella sp. NO15	1970461	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.52072	34.7	-	NASJ01	50	2285	2203	5/16/17	5/24/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603530	GCA_002141935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/935/GCA_002141935.1_ASM214193v1	-	NO15
Haemophilus quentini	123834	PRJNA338791	338791	Proteobacteria	Gammaproteobacteria	2.12319	38.5	-	MDJC01	71	2188	1980	10/4/16	4/13/17	Contig	Public Health Ontario laborato	SAMN05570529	GCA_001752475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/475/GCA_001752475.1_ASM175247v1	-	C860
Bacillus wiedmannii	1890302	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.6161	35.1	-	LXFM01	72	5977	5651	5/17/16	4/5/17	Contig	Cornell University	SAMN04909724	GCA_001645395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/395/GCA_001645395.1_ASM164539v1	-	FSL H8-0032
Flavonifractor sp. An82	1965660	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.66866	58.9	-	NFHG01	59	3628	3414	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473762	GCA_002159265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/265/GCA_002159265.1_ASM215926v1	-	An82
Thermodesulfovibrio sp. RBG_19FT_COMBO_42_12	1802373	PRJNA288027	288027	Nitrospirae	Nitrospira	3.14422	40.7	-	MIDI01	260	3270	2599	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314068	GCA_001830985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/985/GCA_001830985.1_ASM183098v1	27774985	-
Desulfobacca sp. 4484_104	1940691	PRJNA362212	362212	Proteobacteria	delta/epsilon subdivisions	2.65346	53.6	-	MUKC01	181	2702	2518	3/20/17	3/20/17	Scaffold	The University of Texas at Austin	SAMN06282502	GCA_002049795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/795/GCA_002049795.1_ASM204979v1	-	-
Pseudomonas graminis	158627	PRJEB17037	351193	Proteobacteria	Gammaproteobacteria	5.85205	60.2	-	FOHW01	98	5300	5117	10/29/16	4/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216197	GCA_900111735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/735/GCA_900111735.1_IMG-taxon_2671180035_annotated_assembly	-	DSM 11363
Candidatus Thiodiazotropha endoloripes	1818881	PRJNA314435	314435	Proteobacteria	Gammaproteobacteria	4.46267	52.1	-	LVJW01	12	4013	3919	8/23/16	4/13/17	Scaffold	University of Vienna	SAMN04574141	GCA_001708965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/965/GCA_001708965.1_ASM170896v1	27775707	-
Eisenbergiella tayi	1432052	PRJNA335591	335591	Terrabacteria group	Firmicutes	7.44375	46.5	-	MEHB01	48	6467	6279	9/9/16	4/5/17	Contig	Public Health Agency of Canada	SAMN05449645	GCA_001722575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/575/GCA_001722575.1_ASM172257v1	-	NML110678
Mycobacterium intermedium	28445	PRJNA338014	338014	Terrabacteria group	Actinobacteria	6.85564	65.8	-	MIHB01	213	6028	5706	9/9/16	4/13/17	Scaffold	UW	SAMN05729961	GCA_001722345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/345/GCA_001722345.1_ASM172234v1	-	HMC2_M5
Mycobacterium porcinum	39693	PRJNA338014	338014	Terrabacteria group	Actinobacteria	6.24014	66.8	-	MSTD01	110	6027	5791	1/6/17	4/17/17	Scaffold	UW	SAMN06199452	GCA_001942045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/045/GCA_001942045.1_ASM194204v1	-	HMC1
Candidatus Marithrix sp. Canyon 246	1827136	PRJNA322859	322859	Proteobacteria	Gammaproteobacteria	3.23883	34	-	MCBX01	44	3287	3119	9/13/16	4/13/17	Contig	Max Planck Institute for Marine Microbiology	SAMN05176314	GCA_001723685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/685/GCA_001723685.1_ASM172368v1	27536274	-
Lautropia sp. SCN 66-9	1660106	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	1.6576	66.4	-	MEFX01	225	1728	1395	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652500	GCA_001725315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/315/GCA_001725315.1_ASM172531v1	26031303	-
Pelagibacterium sp. SCN 63-23	1660124	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	7.07427	62.8	-	MEEU01	110	6865	6654	9/13/16	9/13/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03652470	GCA_001724575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/575/GCA_001724575.1_ASM172457v1	26031303	-
Thiobacillus sp. SCN 62-729	1660148	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	0.887785	61.9	-	MEFL01	83	914	752	9/13/16	9/13/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03652488	GCA_001725615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/615/GCA_001725615.1_ASM172561v1	26031303	-
Paludibacter sp. SCN 51-9	1660122	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	0.391599	51.2	-	MEGE01	52	319	243	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652508	GCA_001725755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/755/GCA_001725755.1_ASM172575v1	26031303	-
Enterococcus termitis	332950	PRJNA313452	313452	Terrabacteria group	Firmicutes	4.35961	37.4	-	NGNA01	43	3950	3715	5/16/17	5/24/17	Scaffold	Broad Institute	SAMN04634080	GCA_002140675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/675/GCA_002140675.1_ASM214067v1	-	4C2_DIV0658
Pectobacterium parmentieri	1905730	PRJNA243029	243029	Proteobacteria	Gammaproteobacteria	5.01536	50.4	-	JMDL01	8	4656	4407	9/24/14	4/10/17	Scaffold	CNRS - UPR2355	SAMN02729843	GCA_000757625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/625/GCA_000757625.1_PecWasRNS_1.0	-	RNS08.42.1A
Streptomyces nanshensis	518642	PRJNA242488	242488	Terrabacteria group	Actinobacteria	6.49148	72.7	-	JHEJ01	67	5451	5169	10/6/16	3/14/17	Scaffold	"Beijing Institute of Genomics, Chinese Academy of Sciences"	SAMN02697031	GCA_001753705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/705/GCA_001753705.1_ASM175370v1	27446038	10374
Streptomyces agglomeratus	285458	PRJNA299865	299865	Terrabacteria group	Actinobacteria	9.51432	70.4	plasmid pAMP1:NZ_CM007205.1/CM007205.1	MEHI01	10	8649	7880	9/26/16	3/13/17	Contig	Chinese Academy of Sciences	SAMN04216912	GCA_001746465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/465/GCA_001746465.1_ASM174646v1	-	5/1/03
Fluviicola sp. RIFCSPHIGHO2_12_FULL_43_24	1798019	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.527	42.8	-	MGWN01	18	3890	3818	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315582	GCA_001801015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/801/015/GCA_001801015.1_ASM180101v1	27774985	-
Turicella sp. HMSC074A09	1739311	PRJNA299961	299961	Terrabacteria group	Actinobacteria	2.85593	61	-	LTFW01	88	2662	2502	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477623	GCA_001811545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/545/GCA_001811545.1_ASM181154v1	-	HMSC074A09
Sideroxydans sp. RIFOXYD2_FULL_59_7	1802156	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	1.03291	56.9	-	MIAF01	530	1202	694	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316187	GCA_001830535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/535/GCA_001830535.1_ASM183053v1	27774985	-
Mycobacterium franklinii	948102	PRJNA323571	323571	Terrabacteria group	Actinobacteria	5.11501	64.2	-	MAEP01	18	5050	4917	3/3/17	3/6/17	Contig	LNCC	SAMN05186775	GCA_002013295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/295/GCA_002013295.1_ASM201329v1	-	D16R27
Eubacterium ruminantium	42322	PRJEB16207	348951	Terrabacteria group	Firmicutes	2.87637	37.3	-	FNHR01	34	2582	2476	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04490370	GCA_900103685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/685/GCA_900103685.1_IMG-taxon_2623620481_annotated_assembly	-	2388
Paraburkholderia phenazinium	60549	PRJEB15886	347958	Proteobacteria	Betaproteobacteria	8.59789	62.3	-	FNCJ01	52	7817	7512	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216466	GCA_900100735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/735/GCA_900100735.1_IMG-taxon_2651870170_annotated_assembly	-	LMG 2247
Eubacterium pyruvativorans	155865	PRJEB17186	351301	Terrabacteria group	Firmicutes	2.27569	54.4	-	FOWF01	75	2063	1911	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216515	GCA_900115385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/385/GCA_900115385.1_IMG-taxon_2654588172_annotated_assembly	-	KHPC4
Halanaerobium congolense	54121	PRJEB15928	348257	Terrabacteria group	Firmicutes	2.65227	33.4	-	FNDF01	63	2573	2396	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04515651	GCA_900100575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/575/GCA_900100575.1_IMG-taxon_2642422558_annotated_assembly	-	101314
Bradyrhizobium canariense	255045	PRJNA355289	355289	Proteobacteria	Alphaproteobacteria	8.27338	63	-	NAEY01	173	7853	7333	4/24/17	8/7/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN06067988	GCA_002108695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/695/GCA_002108695.1_ASM210869v1	28729275	UBMA051
Olsenella umbonata	604330	PRJEB15755	347663	Terrabacteria group	Actinobacteria	2.21484	65	-	FMZL01	49	1999	1871	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487824	GCA_900101655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/655/GCA_900101655.1_IMG-taxon_2606217797_annotated_assembly	-	DSM 22619
Clostridium cochlearium	1494	PRJEB16770	352166	Terrabacteria group	Firmicutes	2.67701	28.7	-	OAOH01	19	-	-	9/6/17	9/6/17	Scaffold	TEAGASC	SAMEA104228768	GCA_900205945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/205/945/GCA_900205945.1_Clostridium_cochlearium_DPC7174	-	-
Bradyrhizobium erythrophlei	1437360	PRJEB18219	355503	Proteobacteria	Alphaproteobacteria	11.7386	61.4	-	FSRD01	4	11398	10570	12/14/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443247	GCA_900129675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/675/GCA_900129675.1_IMG-taxon_2698537050_annotated_assembly	-	GAS478
Collimonas sp. OK412	1801619	PRJEB17118	351330	Proteobacteria	Betaproteobacteria	5.45716	59.7	-	FOLC01	61	4968	4798	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04515619	GCA_900112135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/135/GCA_900112135.1_IMG-taxon_2609459736_annotated_assembly	-	OK412
Tyzzerella sp. UBA649	1947767	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.76119	38.9	-	DBOJ01	248	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457565	GCA_002299545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/545/GCA_002299545.1_ASM229954v1	28894102	-
Azotobacter beijerinckii	170623	PRJEB16980	351123	Proteobacteria	Gammaproteobacteria	4.94016	65.6	-	FOFJ01	182	4684	4250	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04244573	GCA_900110885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/885/GCA_900110885.1_IMG-taxon_2597490340_annotated_assembly	-	DSM 378
Terribacillus saccharophilus	361277	PRJNA395369	395369	Terrabacteria group	Firmicutes	3.7432	42.9	-	NPBL01	80	3807	3731	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372683	GCA_002272065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/065/GCA_002272065.1_assembly-7518_v1	-	7518
Megamonas sp. UBA1792	1946840	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.26564	40.8	-	DCFY01	167	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06454585	GCA_002315155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/155/GCA_002315155.1_ASM231515v1	28894102	-
Rhizobium oryzae	464029	PRJNA344729	344729	Proteobacteria	Alphaproteobacteria	5.39147	62.8	-	MKIP01	59	4791	4653	1/6/17	4/16/17	Scaffold	Chinese Academy of Agricultural Sciences	SAMN05832484	GCA_001938935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/935/GCA_001938935.1_ASM193893v1	-	1.7048
Trichococcus flocculiformis	82803	PRJEB18193	355428	Terrabacteria group	Firmicutes	3.063	45.7	-	FQVR01	82	2899	2745	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488048	GCA_900129415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/415/GCA_900129415.1_IMG-taxon_2619618835_annotated_assembly	-	DSM 23957
Bacillus andreraoultii	1499685	PRJEB6477	251837	Terrabacteria group	Firmicutes	4.0501	35.4	-	CCNM01	58	3808	3570	8/22/14	4/10/17	Contig	URMITE	SAMEA2697685	GCA_000753495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/495/GCA_000753495.1_Bacillus_andreraoultii	-	-
Fibrobacter sp. UWB1	1964355	PRJNA376435	376435	FCB group	Fibrobacteres	3.6016	50.2	-	MWQL01	46	2951	2814	6/28/17	6/30/17	Contig	University of Wisconsin - Madison	SAMN06392816	GCA_002210325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/210/325/GCA_002210325.1_ASM221032v1	-	UWB1
Actinomyces denticolens	52767	PRJEB18284	355700	Terrabacteria group	Actinobacteria	2.76077	71.6	-	FQYL01	33	2328	2188	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216246	GCA_900141725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/725/GCA_900141725.1_IMG-taxon_2651870314_annotated_assembly	-	PA
Glutamicibacter sp. BW77	2024402	PRJNA387187	387187	Terrabacteria group	Actinobacteria	3.90203	56.6	-	NRGT01	90	3674	3538	9/21/17	9/23/17	Scaffold	"Dutton Lab, UCSD"	SAMN07141165	GCA_002332285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/285/GCA_002332285.1_ASM233228v1	28644126	BW77
Scytonema sp. HK-05	1137095	PRJNA347433	347433	Terrabacteria group	Cyanobacteria/Melainabacteria group	9.56423	43.7	-	MRCF01	179	7925	7320	12/14/16	4/16/17	Scaffold	"Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences"	SAMN05890690	GCA_001904675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/675/GCA_001904675.1_ASM190467v1	-	HK-05
Ktedonobacter sp. 13_2_20CM_2_56_8	1805232	PRJNA297196	297196	Terrabacteria group	Chloroflexi	2.88693	53.5	-	MNDS01	223	2551	2316	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327908	GCA_001915055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/055/GCA_001915055.1_ASM191505v1	27843720	-
Sphaerochaeta sp. UBA1365	1947469	PRJNA348753	348753	Spirochaetes	Spirochaetia	2.44987	55	-	DBRP01	107	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06456413	GCA_002306015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/015/GCA_002306015.1_ASM230601v1	28894102	-
Escherichia coli	562	PRJNA307507	307507	Proteobacteria	Gammaproteobacteria	5.01424	50.8033	chromosome:NZ_CP014492.1/CP014492.1; plasmid pMVAST0167_1:NZ_CP014493.1/CP014493.1; plasmid pMVAST0167_2:NZ_CP014494.1/CP014494.1	-	3	5210	4626	2/23/16	8/8/17	Complete Genome	University of Minnesota	SAMN04381852	GCA_001566655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/655/GCA_001566655.1_ASM156665v1	-	MVAST0167
Arcobacter porcinus	1935204	PRJNA283165	283165	Proteobacteria	delta/epsilon subdivisions	1.96772	27	-	LDIR01	9	2042	1978	7/26/16	4/13/17	Contig	Ghent University	SAMN03609681	GCA_001695265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/265/GCA_001695265.1_ASM169526v1	-	117434
Streptococcus azizii	1579424	PRJNA358417	358417	Terrabacteria group	Firmicutes	2.33779	42.7	-	MSPS01	49	2085	1914	2/4/17	4/17/17	Contig	Centers for Disease Control and Prevention	SAMN06174761	GCA_001984745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/745/GCA_001984745.1_ASM198474v1	-	13-1151-1
Ensifer aridi	1708715	PRJNA312299	312299	Proteobacteria	Alphaproteobacteria	6.63628	61.8	-	LUFV01	119	6393	5974	4/14/17	4/21/17	Scaffold	IRD	SAMN04492863	GCA_002093415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/415/GCA_002093415.1_ASM209341v1	28088165	LEM451
Rodentibacter heylii	1906744	PRJNA343597	343597	Proteobacteria	Gammaproteobacteria	2.51414	40.1	-	MLAB01	97	2461	2294	2/15/17	2/22/17	Contig	University of Copenhagen	SAMN05858756	GCA_001998625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/625/GCA_001998625.1_ASM199862v1	-	199137021
Acinetobacter genomosp. 33YU	1675530	PRJNA287473	287473	Proteobacteria	Gammaproteobacteria	3.94816	38.5	-	LFZR01	128	3888	3629	2/9/17	4/6/17	Scaffold	"Sir Run Run Shaw hospital, School of Medicine, Zhejiang University"	SAMN03784701	GCA_001990765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/765/GCA_001990765.1_ASM199076v1	-	A360
Nocardia donostiensis	1538463	PRJNA304984	304984	Terrabacteria group	Actinobacteria	5.79592	66.6	-	MUKP01	120	5207	4869	4/6/17	4/8/17	Contig	CDC	SAMN06246728	GCA_002081715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/715/GCA_002081715.1_ASM208171v1	26914251	X1654
Rodentibacter ratti	1906745	PRJNA343597	343597	Proteobacteria	Gammaproteobacteria	2.05876	40.3	-	MLAI01	31	2032	1939	2/15/17	4/17/17	Contig	University of Copenhagen	SAMN05860630	GCA_002000465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/465/GCA_002000465.1_ASM200046v1	-	Ppn158
Methylocaldum sp. 175	1528100	PRJEB18516	356533	Proteobacteria	Gammaproteobacteria	5.4801	63	-	FXAM01	8	4866	4631	4/19/17	4/22/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02949497	GCA_900155475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/475/GCA_900155475.1_IMG-taxon_2593339134_annotated_assembly	-	175
Archaeoglobus sp. JdFR-23	1934980	PRJNA269163	269163	Euryarchaeota	Archaeoglobi	1.62914	39.9	-	MTMK01	101	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226340	GCA_002010125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/125/GCA_002010125.1_ASM201012v1	28350381	-
Escherichia coli	562	PRJNA292047	292047	Proteobacteria	Gammaproteobacteria	4.84748	50.8	chromosome:NZ_CP012380.1/CP012380.1	-	1	5032	4718	7/31/17	8/3/17	Complete Genome	Nankai University	SAMN03963241	GCA_002237325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/325/GCA_002237325.1_ASM223732v1	-	WAT
Elizabethkingia endophytica	1606016	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	4.13677	35.4	-	MAGY01	135	3771	3633	3/7/17	3/10/17	Contig	CDC	SAMN05255122	GCA_002023135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/135/GCA_002023135.1_ASM202313v1	-	JM-87
Pseudoflavonifractor sp. An184	1965576	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.59098	59.9	-	NFKI01	162	3362	3179	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473647	GCA_002160305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/305/GCA_002160305.1_ASM216030v1	-	An184
Mycoplasma agassizii	33922	PRJNA398096	398096	Terrabacteria group	Tenericutes	1.21121	28.4	-	NQNY01	40	981	918	8/29/17	8/30/17	Scaffold	"University of Nevada, Reno"	SAMN07501646	GCA_002276225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/225/GCA_002276225.1_ASM227622v1	-	723
Demequina sp. NBRC 110054	1570343	PRJDB3263	276645	Terrabacteria group	Actinobacteria	3.35447	70	-	BBRK01	6	3066	2983	4/1/17	4/17/17	Contig	National Institute of Technology and Evaluation Biological Resource Center	SAMD00022844	GCA_002090115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/115/GCA_002090115.1_ASM209011v1	-	NBRC 110054
Pseudomonas versuta	1788301	PRJNA353165	353165	Proteobacteria	Gammaproteobacteria	5.21988	58.2	-	MPJC01	79	4811	4625	12/12/16	4/26/17	Contig	University of Malaya	SAMN06011243	GCA_001901355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/355/GCA_001901355.1_ASM190135v1	-	A4R1.5
Mycobacterium paraense	767916	PRJNA308282	308282	Terrabacteria group	Actinobacteria	5.80538	69	-	LQPK01	46	5535	5370	4/20/17	4/22/17	Contig	University of Trento	SAMN04216944	GCA_002102295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/295/GCA_002102295.1_ASM210229v1	25487637	FI-07156
Xanthomonas axonopodis pv. manihotis str. UA226	1185661	PRJNA163717	163717	Proteobacteria	Gammaproteobacteria	4.95186	65	-	AKEL01	129	4449	4086	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090342	GCA_000265585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/585/GCA_000265585.1_UA226	22699502	UA226
Anaeromassilibacillus sp. An200	1965587	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.72114	54.3	-	NFJU01	151	3644	3407	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473663	GCA_002160025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/025/GCA_002160025.1_ASM216002v1	-	An200
Kiloniella majae	1938558	PRJNA347280	347280	Proteobacteria	Alphaproteobacteria	4.3879	45.5	-	MTSZ01	56	4092	4022	5/5/17	6/21/17	Contig	Universidad de Santiago de Compostela	SAMN05878523	GCA_002118315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/118/315/GCA_002118315.1_ASM211831v1	-	M56.1
Alloscardovia macacae	1160091	PRJNA376375	376375	Terrabacteria group	Actinobacteria	1.89158	55.8	-	MWWT01	20	1592	1504	8/18/17	8/21/17	Contig	University of Parma	SAMN06341153	GCA_002259705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/705/GCA_002259705.1_ASM225970v1	28764658	DSM 24762
Bordetella genomosp. 9	1416803	PRJNA385118	385118	Proteobacteria	Betaproteobacteria	6.1613	66.6	-	NEVJ01	3	5594	5451	8/21/17	8/23/17	Contig	University of Michigan	SAMN06767143	GCA_002261425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/425/GCA_002261425.1_ASM226142v1	-	AU21707
Gemmiger sp. An120	1965549	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.39499	60.2	-	NFLN01	51	3176	3023	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473593	GCA_002160955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/955/GCA_002160955.1_ASM216095v1	-	An120
Massiliomicrobiota sp. An134	1965557	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.55886	31.5	-	NFLH01	94	2646	2508	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473607	GCA_002160815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/815/GCA_002160815.1_ASM216081v1	-	An134
Drancourtella sp. An12	1965548	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.6321	46.2	-	NFLO01	55	3532	3361	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473592	GCA_002160935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/935/GCA_002160935.1_ASM216093v1	-	An12
Listeria sp. ILCC801	1649188	PRJEB9225	390501	Terrabacteria group	Firmicutes	2.58295	40.6	-	FYBU01	26	2569	2483	6/15/17	7/5/17	Contig	JUSTUS LIEBIG UNIVERSITY	SAMEA104121267	GCA_900186145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/145/GCA_900186145.1_ILCC806.fasta	-	-
Candidatus Frackibacter sp. WG13	2017978	PRJEB17469	351683	Terrabacteria group	Firmicutes	2.76704	33.5	-	FOTT01	48	2710	2567	10/31/16	8/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488699	GCA_900114655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/655/GCA_900114655.1_IMG-taxon_2642422548_annotated_assembly	-	WG13
Staphylococcus saccharolyticus	33028	PRJNA375758	375758	Terrabacteria group	Firmicutes	2.54255	33	-	NDFK01	140	2462	2354	8/29/17	8/30/17	Contig	SysMilk	SAMN06718483	GCA_002276735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/735/GCA_002276735.1_ASM227673v1	-	OG2-1
Pannonibacter sp. CS1GBFMT1	2003581	PRJEB20971	395450	Proteobacteria	Alphaproteobacteria	5.16477	63.3	-	FYAP01	31	-	-	7/22/17	7/22/17	Contig	Griffith University	SAMEA104113269	GCA_900185695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/695/GCA_900185695.1_CS1GBFMT1_Assembly_1	-	-
Azorhizobium sp. 35-67-5	1970321	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	1.22405	67.4	-	NCFB01	631	1446	1349	8/16/17	8/16/17	Scaffold	None	SAMN06622331	GCA_002280945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/945/GCA_002280945.1_ASM228094v1	-	-
Candidatus Dactylopiibacterium carminicum	857335	PRJNA291435	291435	Proteobacteria	Betaproteobacteria	3.57864	62.7	-	NMRN01	120	3476	3203	9/1/17	9/4/17	Scaffold	Centro de Ciencias Genomicas-UNAM	SAMN07349605	GCA_002284975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/975/GCA_002284975.1_ASM228497v1	-	NFDCM
Candidatus Microthrix sp. UBA881	1946223	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.79088	41.3	-	DBFL01	95	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457646	GCA_002294285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/285/GCA_002294285.1_ASM229428v1	28894102	-
Hydrogenovibrio sp. UBA654	1946608	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	1.59662	34	-	DBOE01	91	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455000	GCA_002299585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/585/GCA_002299585.1_ASM229958v1	28894102	-
Leptolinea sp. UBA1387	1946749	PRJNA348753	348753	Terrabacteria group	Chloroflexi	2.78679	41.2	-	DBQT01	173	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06456170	GCA_002305345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/345/GCA_002305345.1_ASM230534v1	28894102	-
Empedobacter sp. UBA909	1946454	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.16004	32.1	-	DBEJ01	348	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453948	GCA_002293985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/985/GCA_002293985.1_ASM229398v1	28894102	-
Oblitimonas sp. UBA1679	1946999	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.90096	48.6	-	DCKH01	18	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454211	GCA_002320655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/655/GCA_002320655.1_ASM232065v1	28894102	-
Candidatus Peribacter sp. UBA2144	1961372	PRJNA348753	348753	unclassified Bacteria	Bacteria candidate phyla	1.05801	42	-	DCXE01	93	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451095	GCA_002328295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/295/GCA_002328295.1_ASM232829v1	28894102	-
Richelia sp. UBA3957	1947384	PRJNA348753	348753	Terrabacteria group	Cyanobacteria/Melainabacteria group	8.05826	37	-	DGDH01	418	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452260	GCA_002385345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/345/GCA_002385345.1_ASM238534v1	28894102	-
Mageeibacillus sp. UBA1243	1946781	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.81874	51.1	-	DBWH01	68	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06455239	GCA_002308595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/595/GCA_002308595.1_ASM230859v1	28894102	-
Dechloromonas sp. UBA5016	1946400	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	3.30434	60.6	-	DGYC01	297	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455738	GCA_002396545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/545/GCA_002396545.1_ASM239654v1	28894102	-
Alphaproteobacteria bacterium	1913988	PRJNA391950	391950	Proteobacteria	Alphaproteobacteria	2.08137	52	-	NVTE01	17	1904	1862	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568937	GCA_002401455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/455/GCA_002401455.1_ASM240145v1	-	-
Solobacterium sp. UBA1789	1947458	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.27018	36.1	-	DCGB01	137	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456004	GCA_002314515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/515/GCA_002314515.1_ASM231451v1	28894102	-
Neisseria dumasiana	1931275	PRJNA359492	359492	Proteobacteria	Betaproteobacteria	2.69166	50.5	-	MTAB01	138	2566	2410	4/24/17	4/26/17	Contig	Wadsworth Center / NYSDOH	SAMN06192248	GCA_002108545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/545/GCA_002108545.1_ASM210854v1	-	124861
Escherichia coli	562	PRJNA298687	298687	Proteobacteria	Gammaproteobacteria	4.56724	50.8	chromosome:NZ_CP013952.1/CP013952.1	-	1	4716	4370	4/28/17	5/9/17	Complete Genome	Wuhan University	SAMN04396805	GCA_002118095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/118/095/GCA_002118095.1_ASM211809v1	28400512	HST04
Escherichia coli	562	PRJNA379778	379778	Proteobacteria	Gammaproteobacteria	4.55081	50.8	chromosome:NZ_CP020368.1/CP020368.1	-	1	4687	4320	4/13/17	4/17/17	Complete Genome	GlaxoSmithKline Vaccines	SAMN06619924	GCA_002090355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/355/GCA_002090355.1_ASM209035v1	-	BLR(DE3)
Escherichia coli	562	PRJNA273553	273553	Proteobacteria	Gammaproteobacteria	4.50276	50.8	chromosome:NZ_CP011124.1/CP011124.1	-	1	4614	4290	3/17/17	3/20/17	Complete Genome	UNIVERSITI SAINS MALAYSIA	SAMN03294311	GCA_000833635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/635/GCA_000833635.2_ASM83363v2	-	USML2
Neorhizobium sp. UBA4388	1946973	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	5.08648	58.8	-	DGRM01	61	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457228	GCA_002391045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/045/GCA_002391045.1_ASM239104v1	28894102	-
Rhizobiales bacterium	1909294	PRJNA391950	391950	Proteobacteria	Alphaproteobacteria	2.22483	41.4	-	NVRK01	58	2125	2024	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568983	GCA_002400845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/845/GCA_002400845.1_ASM240084v1	-	-
Flavobacteriaceae bacterium	1871037	PRJNA391950	391950	FCB group	Bacteroidetes/Chlorobi group	2.72349	34.3	-	NVSD01	160	2317	2136	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568964	GCA_002401105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/105/GCA_002401105.1_ASM240110v1	-	-
SAR86 cluster bacterium	2030880	PRJNA391950	391950	Proteobacteria	Gammaproteobacteria	3.86365	45.3	-	NVVJ01	120	3685	3616	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568880	GCA_002402175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/402/175/GCA_002402175.1_ASM240217v1	-	-
Gammaproteobacteria bacterium	1913989	PRJNA391950	391950	Proteobacteria	Gammaproteobacteria	1.2511	42.1	-	NVRG01	150	1309	1250	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568987	GCA_002400805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/805/GCA_002400805.1_ASM240080v1	-	-
Rhodobacteraceae bacterium	1904441	PRJNA391950	391950	Proteobacteria	Alphaproteobacteria	4.0713	57	-	NVUP01	50	3966	3426	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568900	GCA_002401945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/945/GCA_002401945.1_ASM240194v1	-	-
Piscirickettsiaceae bacterium	2030828	PRJNA391950	391950	Proteobacteria	Gammaproteobacteria	2.53756	42.9	-	NVUF01	47	2607	2482	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568910	GCA_002401815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/815/GCA_002401815.1_ASM240181v1	-	-
Candidatus Wolfebacteria bacterium	2030812	PRJNA391950	391950	unclassified Bacteria	Bacteria candidate phyla	1.12231	39.8	-	NVTD01	62	1219	1174	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568938	GCA_002401445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/445/GCA_002401445.1_ASM240144v1	-	-
Flavobacteriales bacterium	2021391	PRJNA391950	391950	FCB group	Bacteroidetes/Chlorobi group	3.05769	32	-	NVVI01	65	2691	2534	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568881	GCA_002402165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/402/165/GCA_002402165.1_ASM240216v1	-	-
Candidatus Kaiserbacteria bacterium	2030810	PRJNA391950	391950	unclassified Bacteria	Bacteria candidate phyla	0.733271	41.1	-	NVUN01	8	807	714	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568902	GCA_002401925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/925/GCA_002401925.1_ASM240192v1	-	-
Thiotrichales bacterium	2026796	PRJNA391950	391950	Proteobacteria	Gammaproteobacteria	1.23369	36.8	-	NVTI01	126	1132	1097	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568933	GCA_002401535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/535/GCA_002401535.1_ASM240153v1	-	-
Rhodobacteraceae bacterium	1904441	PRJNA391950	391950	Proteobacteria	Alphaproteobacteria	3.22559	54.4	-	NVUX01	84	3319	3213	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568892	GCA_002402045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/402/045/GCA_002402045.1_ASM240204v1	-	-
Gammaproteobacteria bacterium	1913989	PRJNA391950	391950	Proteobacteria	Gammaproteobacteria	2.95909	37.5	-	NVSB01	80	2730	2493	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568966	GCA_002401065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/065/GCA_002401065.1_ASM240106v1	-	-
Flavobacteriaceae bacterium	1871037	PRJNA391950	391950	FCB group	Bacteroidetes/Chlorobi group	2.10081	33.4	-	NVSL01	114	1989	1740	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568956	GCA_002401215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/215/GCA_002401215.1_ASM240121v1	-	-
Rhizobiales bacterium	1909294	PRJNA391950	391950	Proteobacteria	Alphaproteobacteria	2.23484	47.3	-	NVRU01	38	2139	2061	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568973	GCA_002400925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/925/GCA_002400925.1_ASM240092v1	-	-
Escherichia coli	562	PRJNA361209	361209	Proteobacteria	Gammaproteobacteria	4.64328	50.8	chromosome:NZ_CP019629.1/CP019629.1	-	1	4786	4471	2/14/17	2/26/17	Complete Genome	Hebrew University of Jerusalem	SAMN06227049	GCA_001999185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/185/GCA_001999185.1_ASM199918v1	25530806	MGY
Solobacterium sp. UBA1761	1947457	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.6316	37.3	-	DCHD01	59	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452460	GCA_002315565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/565/GCA_002315565.1_ASM231556v1	28894102	-
Alphaproteobacteria bacterium	1913988	PRJNA391950	391950	Proteobacteria	Alphaproteobacteria	2.6773	49.4	-	NVTJ01	176	2630	2552	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568932	GCA_002401545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/545/GCA_002401545.1_ASM240154v1	-	-
Dechloromonas sp. UBA5021	1946402	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	3.65019	61	-	DGXX01	244	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450720	GCA_002396725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/725/GCA_002396725.1_ASM239672v1	28894102	-
Mageeibacillus sp. UBA1257	1946783	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.63553	47	-	DBVT01	133	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06456139	GCA_002308775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/775/GCA_002308775.1_ASM230877v1	28894102	-
Empedobacter sp. UBA811	1946453	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.46706	31.2	-	DBID01	301	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456106	GCA_002296555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/555/GCA_002296555.1_ASM229655v1	28894102	-
Leptolinea sp. UBA2195	1946751	PRJNA348753	348753	Terrabacteria group	Chloroflexi	2.20386	52.5	-	DCVF01	78	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456381	GCA_002328635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/635/GCA_002328635.1_ASM232863v1	28894102	-
Hydrogenovibrio sp. UBA1537	1946604	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.16732	43.6	-	DCPT01	85	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454587	GCA_002323235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/235/GCA_002323235.1_ASM232323v1	28894102	-
Candidatus Microthrix sp. UBA867	1946222	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.40208	50.3	-	DBFZ01	87	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450322	GCA_002295295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/295/GCA_002295295.1_ASM229529v1	28894102	-
Catabacter sp. UBA941	1946308	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.19654	52.1	-	DBDD01	358	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06454455	GCA_002293365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/365/GCA_002293365.1_ASM229336v1	28894102	-
Azorhizobium sp. 35-67-15	1970320	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	0.849782	67.3	-	NCFL01	463	967	935	8/16/17	8/16/17	Scaffold	None	SAMN06622321	GCA_002281175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/175/GCA_002281175.1_ASM228117v1	-	-
Pannonibacter sp. TSB10GB1	2003583	PRJEB20967	395410	Proteobacteria	Alphaproteobacteria	5.16258	63.3	-	FYAQ01	30	-	-	7/21/17	7/21/17	Contig	Griffith University	SAMEA104113272	GCA_900185705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/705/GCA_900185705.1_TSB10GB1_Assembly_1	-	-
Listeria sp. ILCC801	1649188	PRJEB9225	390501	Terrabacteria group	Firmicutes	2.815	40.4	-	FYBR01	25	2847	2741	6/15/17	7/5/17	Contig	JUSTUS LIEBIG UNIVERSITY	SAMEA104121266	GCA_900186155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/155/GCA_900186155.1_ILCC804.fasta	-	-
Drancourtella sp. An57	1965647	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.29078	45.7	-	NFHY01	46	3206	3052	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473739	GCA_002161525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/525/GCA_002161525.1_ASM216152v1	-	An57
Massiliomicrobiota sp. An105	1965540	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.61843	31.7	-	NFLY01	122	2681	2557	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473576	GCA_002161155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/155/GCA_002161155.1_ASM216115v1	-	An105
Gemmiger sp. An50	1965639	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.58251	58.7	-	NFID01	49	3374	3230	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473731	GCA_002161595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/595/GCA_002161595.1_ASM216159v1	-	An50
Anaeromassilibacillus sp. An172	1965570	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.81428	41.4	-	NFKS01	63	2601	2490	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473636	GCA_002160515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/515/GCA_002160515.1_ASM216051v1	-	An172
Xanthomonas axonopodis pv. manihotis str. ORST17	1185702	PRJNA163799	163799	Proteobacteria	Gammaproteobacteria	5.1281	64.9	-	AKEH01	177	4617	4270	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090338	GCA_000265605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/605/GCA_000265605.1_ORST17	22699502	ORST17
Mycobacterium paraense	767916	PRJNA308282	308282	Terrabacteria group	Actinobacteria	5.80613	69	-	LQPL01	51	5547	5373	4/20/17	4/22/17	Contig	University of Trento	SAMN04216941	GCA_002102305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/305/GCA_002102305.1_ASM210230v1	25487637	FI-10043
Demequina sp. NBRC 110057	1570346	PRJDB3263	276645	Terrabacteria group	Actinobacteria	2.73126	70.4	-	BBRN01	7	2549	2478	4/1/17	4/17/17	Contig	National Institute of Technology and Evaluation Biological Resource Center	SAMD00022847	GCA_002090175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/175/GCA_002090175.1_ASM209017v1	-	NBRC 110057
Pseudoflavonifractor sp. An176	1965572	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.56194	58.2	-	NFKO01	71	2313	2188	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473640	GCA_002160435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/435/GCA_002160435.1_ASM216043v1	-	An176
Elizabethkingia endophytica	1606016	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	4.23335	35.4	-	MAHU01	55	3868	3756	3/7/17	3/10/17	Contig	CDC	SAMN05277779	GCA_002023195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/195/GCA_002023195.1_ASM202319v1	-	F3201
Escherichia coli	562	PRJEB15352	359653	Proteobacteria	Gammaproteobacteria	4.63813	50.8	chromosome I:NZ_LT615378.1/LT615378.1	-	1	4772	4458	1/2/17	2/26/17	Complete Genome	UNIVERSITY OF EXETER	SAMEA4444104	GCA_900096795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/096/795/GCA_900096795.1_Ecoli_AG100_Sample3_Doxycycline_Assembly	-	-
Archaeoglobus sp. JdFR-31	1934988	PRJNA269163	269163	Euryarchaeota	Archaeoglobi	2.35134	42.3	-	MTMS01	103	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226348	GCA_002010155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/155/GCA_002010155.1_ASM201015v1	28350381	-
Rodentibacter ratti	1906745	PRJNA343597	343597	Proteobacteria	Gammaproteobacteria	2.03354	40.2	-	MLAJ01	25	1976	1894	2/15/17	4/17/17	Contig	University of Copenhagen	SAMN05860832	GCA_002000485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/485/GCA_002000485.1_ASM200048v1	-	F75
Ensifer aridi	1708715	PRJNA312299	312299	Proteobacteria	Alphaproteobacteria	6.78949	61.6	-	LUFU01	185	6481	6022	4/14/17	4/21/17	Scaffold	IRD	SAMN04457464	GCA_002093435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/435/GCA_002093435.1_ASM209343v1	28088165	LMR013
Arcobacter porcinus	1935204	PRJNA283166	283166	Proteobacteria	delta/epsilon subdivisions	1.88344	27	-	LCUI01	21	1946	1881	7/26/16	4/13/17	Contig	Ghent University	SAMN03609682	GCA_001695315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/315/GCA_001695315.1_ASM169531v1	-	DU19
Bartonella apis	1686310	PRJNA312667	312667	Proteobacteria	Alphaproteobacteria	2.58214	45.5	-	LXYS01	12	2323	2259	1/13/17	4/16/17	Contig	University of Lausanne	SAMN04505060	GCA_001952045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/045/GCA_001952045.1_ASM195204v1	-	PEB0150
Ktedonobacter sp. 13_1_40CM_4_52_4	1805230	PRJNA297196	297196	Terrabacteria group	Chloroflexi	1.38139	51.8	-	MNFP01	124	1314	1075	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327896	GCA_001918255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/255/GCA_001918255.1_ASM191825v1	27843720	-
Glutamicibacter sp. BW80	2024404	PRJNA387187	387187	Terrabacteria group	Actinobacteria	4.04957	60.4	-	NRGV01	78	3791	3639	9/21/17	9/23/17	Scaffold	"Dutton Lab, UCSD"	SAMN07141167	GCA_002332385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/385/GCA_002332385.1_ASM233238v1	28644126	BW80
Fibrobacter sp. UWB4	1964356	PRJNA376435	376435	FCB group	Fibrobacteres	3.58629	48.2	-	MWQI01	18	2953	2823	6/28/17	6/30/17	Contig	University of Wisconsin - Madison	SAMN06392819	GCA_002210345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/210/345/GCA_002210345.1_ASM221034v1	-	UWB4
Megamonas sp. UBA1796	1946841	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.50851	44.7	-	DCFU01	53	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454554	GCA_002319795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/795/GCA_002319795.1_ASM231979v1	28894102	-
Terribacillus saccharophilus	361277	PRJNA395369	395369	Terrabacteria group	Firmicutes	3.7447	42.9	-	NPBJ01	67	3810	3729	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372681	GCA_002272075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/075/GCA_002272075.1_assembly-7517-1_v1	-	7517-1
Azotobacter beijerinckii	170623	PRJEB17088	351702	Proteobacteria	Gammaproteobacteria	4.91451	65.9	-	FOKJ01	240	4796	4291	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04244571	GCA_900112015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/015/GCA_900112015.1_IMG-taxon_2597490353_annotated_assembly	-	DSM 282
Tyzzerella sp. UBA1042	1947765	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.55198	43.2	-	DCDZ01	69	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452054	GCA_002316675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/675/GCA_002316675.1_ASM231667v1	28894102	-
Collimonas sp. OK307	1801620	PRJEB17356	351555	Proteobacteria	Betaproteobacteria	5.18462	56	-	FOQI01	44	4776	4619	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04515618	GCA_900113705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/705/GCA_900113705.1_IMG-taxon_2609459734_annotated_assembly	-	OK307
Bradyrhizobium erythrophlei	1437360	PRJEB18202	355506	Proteobacteria	Alphaproteobacteria	9.18475	61.9	chromosome I:NZ_LT670818.1/LT670818.1	-	1	8690	8302	12/2/16	3/18/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05444169	GCA_900129505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/505/GCA_900129505.1_IMG-taxon_2695420948_annotated_assembly	-	GAS242
Olsenella umbonata	604330	PRJEB15778	347722	Terrabacteria group	Actinobacteria	2.03088	63.1	-	FNWT01	25	1704	1617	10/27/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216447	GCA_900108495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/495/GCA_900108495.1_IMG-taxon_2657244903_annotated_assembly	-	WCP15
Bradyrhizobium canariense	255045	PRJNA355291	355291	Proteobacteria	Alphaproteobacteria	8.29123	63	-	NAFA01	204	7849	7331	4/24/17	8/7/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN06068090	GCA_002108725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/725/GCA_002108725.1_ASM210872v1	28729275	UBMA060
Halanaerobium congolense	54121	PRJEB15829	347761	Terrabacteria group	Firmicutes	2.93322	33	-	FNBJ01	89	2885	2698	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488598	GCA_900102255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/255/GCA_900102255.1_IMG-taxon_2642422547_annotated_assembly	-	WG2
Mycobacterium franklinii	948102	PRJNA323571	323571	Terrabacteria group	Actinobacteria	5.11017	64.2	-	MAFS01	38	5059	4912	3/3/17	3/6/17	Contig	LNCC	SAMN05186779	GCA_002013715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/715/GCA_002013715.1_ASM201371v1	-	D16Q19
Turicella sp. HMSC062E11	1739326	PRJNA299976	299976	Terrabacteria group	Actinobacteria	2.71765	61	-	LTFH01	66	2581	2455	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477635	GCA_001811845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/845/GCA_001811845.1_ASM181184v1	-	HMSC062E11
Fluviicola sp. RIFCSPHIGHO2_01_FULL_43_53	1798017	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.53213	42.8	-	MGWL01	12	3880	3818	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314877	GCA_001802265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/265/GCA_001802265.1_ASM180226v1	27774985	-
Streptomyces agglomeratus	285458	PRJNA340193	340193	Terrabacteria group	Actinobacteria	9.01847	70.4	-	MEHN01	5	8123	7420	9/26/16	3/13/17	Contig	Chinese Academy of Sciences	SAMN05687608	GCA_001746475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/475/GCA_001746475.1_ASM174647v1	-	5/2/06
Streptomyces nanshensis	518642	PRJNA242488	242488	Terrabacteria group	Actinobacteria	8.5754	58.4	-	LJGY01	1285	7112	6296	10/4/16	10/4/16	Scaffold	"Beijing Institute of Genomics, Chinese Academy of Sciences"	SAMN04026267	GCA_001751265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/265/GCA_001751265.1_ASM175126v1	27446038	SCSIO M10399
Pectobacterium parmentieri CFIA1002	1458466	PRJNA237238	237238	Proteobacteria	Gammaproteobacteria	5.00854	50.6	-	JENG01	42	4653	4387	4/15/14	4/9/17	Scaffold	Canadian Food Inspection Agency	SAMN02630743	GCA_000632375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/375/GCA_000632375.1_Pectobacterium_wasabiae_CFIA1002	24831134	CFIA1002
Paludibacter sp. UBA4071	1947024	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.31937	38.5	-	DFYX01	286	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452284	GCA_002383435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/435/GCA_002383435.1_ASM238343v1	28894102	-
Thiobacillus sp. SCN 63-1177	1660147	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	1.81426	63.3	-	MEFI01	190	1862	1486	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652484	GCA_001724735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/735/GCA_001724735.1_ASM172473v1	26031303	-
Pelagibacterium sp. SCN 64-44	1660125	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	8.14918	64.4	-	MEEV01	111	7826	7592	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652471	GCA_001724955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/955/GCA_001724955.1_ASM172495v1	26031303	-
Candidatus Marithrix sp. Canyon 246	1827136	PRJNA322859	322859	Proteobacteria	Gammaproteobacteria	3.11589	34	-	MCBY01	71	3164	2990	9/13/16	4/13/17	Contig	Max Planck Institute for Marine Microbiology	SAMN05176315	GCA_001723695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/695/GCA_001723695.1_ASM172369v1	27536274	-
Eisenbergiella tayi	1432052	PRJNA335591	335591	Terrabacteria group	Firmicutes	7.5673	46.7	-	MEHC01	48	6633	6426	9/9/16	4/5/17	Contig	Public Health Agency of Canada	SAMN05449647	GCA_001722585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/585/GCA_001722585.1_ASM172258v1	-	NML140904
Candidatus Thiodiazotropha endoloripes	1818881	PRJNA314435	314435	Proteobacteria	Gammaproteobacteria	4.61075	51.9	-	LVJX01	15	4164	4057	8/23/16	4/13/17	Scaffold	University of Vienna	SAMN04574142	GCA_001708985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/985/GCA_001708985.1_ASM170898v1	27775707	-
Flavonifractor sp. An52	1965642	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.83409	59.2	-	NFIB01	77	2744	2596	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473734	GCA_002159385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/385/GCA_002159385.1_ASM215938v1	-	An52
Bacillus wiedmannii	1890302	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.61505	35.1	-	LXFL01	71	5972	5645	5/17/16	4/5/17	Contig	Cornell University	SAMN04909723	GCA_001645405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/405/GCA_001645405.1_ASM164540v1	-	FSL H7-0353
Gilliamella sp. NO1	1970460	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.51623	34.7	-	NASI01	156	2287	2179	5/16/17	5/24/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603531	GCA_002141945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/945/GCA_002141945.1_ASM214194v1	-	NO1
Vibrio cidicii	1763883	PRJNA304180	304180	Proteobacteria	Gammaproteobacteria	4.61945	48	-	LOBR01	137	4354	4086	3/25/16	4/12/17	Scaffold	University of Alberta	SAMN04296647	GCA_001597935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/935/GCA_001597935.1_ASM159793v1	-	2538-88
Ruminiclostridium sp. UBA3548	1947399	PRJNA348753	348753	Terrabacteria group	Firmicutes	5.50524	41.1	-	DFOF01	234	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451064	GCA_002376665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/665/GCA_002376665.1_ASM237666v1	28894102	-
Lachnoclostridium sp. An181	1965575	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.77149	43.2	-	NFKJ01	53	2467	2345	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473646	GCA_002160325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/325/GCA_002160325.1_ASM216032v1	-	An181
Mycobacterium malmoense	1780	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.59637	69.1	-	MBED01	224	5363	5045	7/15/16	4/13/17	Contig	JCVI	SAMN04634214	GCA_001686735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/735/GCA_001686735.1_ASM168673v1	-	E1298
Thermosipho sp. 1223	1643332	PRJNA231770	231770	Thermotogae	Thermotogae	1.76755	31.3	-	LBEY01	39	1821	1742	2/13/17	4/17/17	Contig	University of Oslo	SAMN03483420	GCA_001999705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/705/GCA_001999705.1_ASM199970v1	-	1223
Escherichia coli	562	PRJEB15352	359653	Proteobacteria	Gammaproteobacteria	4.63813	50.8	chromosome I:NZ_LT615377.1/LT615377.1	-	1	4772	4452	1/2/17	2/26/17	Complete Genome	UNIVERSITY OF EXETER	SAMEA4444107	GCA_900096845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/096/845/GCA_900096845.1_Ecoli_AG100_Sample3_M9_Assembly	-	-
Eikenella sp. NML01-A-086	1795826	PRJNA310649	310649	Proteobacteria	Betaproteobacteria	1.94062	55.3	-	LXSK01	20	1953	1777	5/19/16	4/12/17	Contig	Public Health Agency of Canada	SAMN04931635	GCA_001648345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/345/GCA_001648345.1_ASM164834v1	-	NML01-A-086
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	5.02169	50.8	chromosome:NZ_CP010132.1/CP010132.1	-	1	5116	4793	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252417	GCA_001900335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/335/GCA_001900335.1_ASM190033v1	-	C10
Achromobacter ruhlandii	72557	PRJNA295291	295291	Proteobacteria	Betaproteobacteria	6.44829	67.8	-	LVKO01	108	5905	5723	5/4/16	4/12/17	Contig	Universidade do Estado do Rio de Janeiro	SAMN04045719	GCA_001637105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/105/GCA_001637105.1_ASM163710v1	-	7863
Thalassolituus sp. UBA824	1947669	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.5139	53.2	-	DBHQ01	376	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450818	GCA_002296235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/235/GCA_002296235.1_ASM229623v1	28894102	-
Oleiphilus sp. HI0086	1822260	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	4.75375	44.4	-	LWFZ01	1534	4458	3861	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580799	GCA_001635225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/225/GCA_001635225.1_ASM163522v1	-	HI0086
bacterium 2013Ark19i	1561004	PRJEB7439	304961	unclassified Bacteria	unclassified Bacteria (miscellaneous)	2.29939	38.3	-	FKIK01	244	1531	1392	4/7/16	8/1/17	Scaffold	Functional Genomics Genter Zurich	SAMEA2826840	GCA_900078765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/765/GCA_900078765.1_2013Arg12A	-	2013Arg12
Hydrotalea flava	714549	PRJEB14091	329620	FCB group	Bacteroidetes/Chlorobi group	1.57967	36.8	-	FLNR01	116	1495	1347	7/19/16	4/5/17	Contig	FIOCRUZ-MG	SAMEA4028671	GCA_900089555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/555/GCA_900089555.1_J04	-	-
Nitrosopelagicus sp. REDSEA-S27_B13N2	1811585	PRJNA289734	289734	TACK group	Thaumarchaeota	1.50782	37.2	-	LUPA01	273	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534602	GCA_001627055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/055/GCA_001627055.1_ASM162705v1	27377622	-
Pseudomonas koreensis	198620	PRJNA345290	345290	Proteobacteria	Gammaproteobacteria	6.10061	59.9	-	MKQJ01	36	5548	5369	10/16/16	4/13/17	Contig	University of the Witwatersrand	SAMN05860607	GCA_001856885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/885/GCA_001856885.1_ASM185688v1	-	IMBL1
Edwardsiella anguillarum ET081126R	1436302	PRJNA231706	231706	Proteobacteria	Gammaproteobacteria	4.23812	58.5	-	JACP01	102	3915	3657	12/18/14	4/10/17	Contig	East China University of Science and Technology	SAMN02568609	GCA_000804615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/615/GCA_000804615.1_ASM80461v1	25466920	ET081126R
Planococcus maritimus	192421	PRJNA341789	341789	Terrabacteria group	Firmicutes	3.21641	47.2	-	MINM01	43	3217	3118	9/16/16	4/13/17	Contig	National Centre for Cell Science Pune	SAMN05728460	GCA_001730005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/005/GCA_001730005.1_ASM173000v1	-	SAMP
Polynucleobacter sp. MWH-EgelM1-30-B4	1743166	PRJNA295639	295639	Proteobacteria	Betaproteobacteria	2.00824	45.3	-	NAIA01	5	2036	1955	6/13/17	6/15/17	Contig	University of Innsbruck	SAMN06620493	GCA_002192535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/535/GCA_002192535.1_ASM219253v1	-	MWH-EgelM1-30-B4
Brevibacterium ravenspurgense	479117	PRJNA305115	305115	Terrabacteria group	Actinobacteria	2.2974	62.4	-	LQQC01	14	2064	1969	3/9/16	4/12/17	Contig	Public Health Agency of Canada	SAMN04317114	GCA_001584615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/615/GCA_001584615.1_ASM158461v1	-	CCUG56047
Gluconobacter japonicus	376620	PRJNA288385	288385	Proteobacteria	Alphaproteobacteria	3.16293	55.8	-	LHZO01	64	2974	2823	3/7/16	4/12/17	Contig	Ghent University	SAMN03799285	GCA_001580865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/865/GCA_001580865.1_ASM158086v1	-	LMG 26773
Enterobacter cloacae UCICRE 9	1329854	PRJNA201992	201992	Proteobacteria	Gammaproteobacteria	4.65038	55.3	-	AYIG01	1	4517	4294	10/30/13	4/2/17	Scaffold	Broad Institute	SAMN02138614	GCA_000492495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/495/GCA_000492495.1_Ente_cloa_UCI_9_V1	-	UCICRE 9
Tsukamurella tyrosinosolvens	57704	PRJNA311144	311144	Terrabacteria group	Actinobacteria	4.8406	71.3	-	LSFR01	9	4731	4632	4/19/16	4/12/17	Contig	Kazan Federal University	SAMN04479211	GCA_001623895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/895/GCA_001623895.1_ASM162389v1	-	PS2
Enterobacter cloacae UCI 39	1400152	PRJNA219291	219291	Proteobacteria	Gammaproteobacteria	4.80637	56	-	JCKQ01	2	4656	4409	2/3/14	4/20/17	Scaffold	Broad Institute	SAMN02356619	GCA_000534155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/155/GCA_000534155.1_Ente_cloa_UCI_39_V1	-	UCI 39
uncultured Clostridia bacterium	244328	PRJEB10932	303149	Terrabacteria group	Firmicutes	1.83313	49.5	-	FIZM01	306	-	-	2/12/16	2/12/16	Scaffold	Center for Microbial Communities	SAMEA3730005	GCA_900019985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/985/GCA_900019985.1_Clostridia_bin_genome_2	-	-
Paenibacillus amylolyticus	1451	PRJNA343020	343020	Terrabacteria group	Firmicutes	6.69223	46.1	-	MRTJ01	57	5947	5833	1/18/17	4/17/17	Contig	Cornell University	SAMN05929614	GCA_001956055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/055/GCA_001956055.1_ASM195605v1	-	FSL H8-0246
Photobacterium aquimaris	512643	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.47099	39.3	-	LZFB01	113	4051	3841	6/24/16	4/13/17	Contig	FDA/CFSAN	SAMN04507561	GCA_001676085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/085/GCA_001676085.1_ASM167608v1	-	GCSL-P109
Porphyrobacter donghaensis	267135	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	2.49265	51.2	-	LSIR01	455	2355	2147	2/10/16	4/4/17	Contig	Georgia Institute of Technology	SAMN04299442	GCA_001556335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/335/GCA_001556335.1_ASM155633v1	-	CCH7-A10
Elizabethkingia genomosp. 4	1756150	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	4.3397	35.6	-	LNOK01	49	3984	3859	1/21/16	4/11/17	Scaffold	CDC	SAMN04254563	GCA_001521765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/765/GCA_001521765.1_ASM152176v1	26966213	G4122
Candidatus Kryptonium thompsoni	1633631	PRJEB11726	301875	FCB group	Candidatus Kryptonia	2.19934	37.4	-	CZVS01	86	2050	1900	11/11/15	4/11/17	Scaffold	DOE - Joint Genome Institute	SAMN03435901	GCA_001535985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/985/GCA_001535985.1_JGI_assembly	-	JGI-5
Burkholderia anthina	179879	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.5323	67.1	-	LOXU01	63	7028	6655	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449277	GCA_001524825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/825/GCA_001524825.1_ASM152482v1	-	MSMB0848
Burkholderia pseudomultivorans	1207504	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.53723	67.5	-	LOXO01	56	6083	5795	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449270	GCA_001524505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/505/GCA_001524505.1_ASM152450v1	-	MSMB0607
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.52534	67.6	-	LPAW01	81	6845	6496	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449359	GCA_001526815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/815/GCA_001526815.1_ASM152681v1	-	MSMB1638WGS
Burkholderia diffusa	488732	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.76772	66.7	-	LOUX01	58	6243	5972	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449187	GCA_001523145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/145/GCA_001523145.1_ASM152314v1	-	MSMB866
Elizabethkingia genomosp. 3	1756149	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	4.3224	35.8	-	MAHQ01	16	3973	3882	3/8/17	3/10/17	Contig	CDC	SAMN05277593	GCA_002023765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/765/GCA_002023765.1_ASM202376v1	-	CSID_3015183685
Bacillus halotolerans	260554	PRJNA324435	324435	Terrabacteria group	Firmicutes	4.13992	43.8	-	MBQV01	36	4199	3942	9/15/16	9/5/17	Contig	University of Neuchatel	SAMN05203409	GCA_001729105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/105/GCA_001729105.1_ASM172910v1	-	III-1
Acidibacillus ferrooxidans	1765683	PRJNA377213	377213	Terrabacteria group	Firmicutes	2.99049	52.2	-	MWPS01	50	2975	2872	3/14/17	3/16/17	Contig	TU Bergakademie Freiberg	SAMN06458487	GCA_002027205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/205/GCA_002027205.1_ASM202720v1	-	Huett2
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.94394	66.5	-	LOTB01	82	6417	6109	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449135	GCA_001522095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/095/GCA_001522095.1_ASM152209v1	-	RF7-non_BP5
Halobacterium hubeiense	1407499	PRJEB8631	319516	Euryarchaeota	Halobacteria	3.23531	66.4	-	CEMQ01	12	3385	3186	4/24/16	7/28/17	Scaffold	UH	SAMEA3268810	GCA_900003525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/003/525/GCA_900003525.1_ASM90000352v1	-	JI20-7
Caldivirga sp. MG_3	1714256	PRJNA295311	295311	TACK group	Crenarchaeota	1.5974	48.7	-	LOCB01	140	1720	1487	1/15/16	1/15/16	Scaffold	Montana State University	SAMN04045693	GCA_001516725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/725/GCA_001516725.1_ASM151672v1	-	-
Syntrophothermus sp. UBA3927	1947646	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.16252	50.5	-	DGEL01	146	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457317	GCA_002385935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/935/GCA_002385935.1_ASM238593v1	28894102	-
Shigella dysenteriae S6205	1212563	PRJNA171070	171070	Proteobacteria	Gammaproteobacteria	5.0697	50.7	-	AMJQ01	582	5584	4651	1/6/15	7/7/17	Contig	Institute for Genome Sciences	SAMN03276472	GCA_000815495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/495/GCA_000815495.1_ASM81549v1	-	S6205
Acinetobacter seifertii	1530123	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.14312	38.6	-	JVTF01	680	4137	3735	7/10/15	4/6/17	Scaffold	University of Washington	SAMN03197315	GCA_001054375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/375/GCA_001054375.1_ASM105437v1	26230489	1334_ABAU
Halothiobacillus sp. 20-53-49	1970383	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	2.10989	53.5	-	NCAR01	287	2187	2065	8/16/17	8/16/17	Scaffold	None	SAMN06622446	GCA_002255225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/225/GCA_002255225.1_ASM225522v1	-	-
Enterobacter xiangfangensis	1296536	PRJNA278423	278423	Proteobacteria	Gammaproteobacteria	4.72397	55.4	-	LDQR01	76	4553	4354	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401394	GCA_001475645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/645/GCA_001475645.1_ASM147564v1	26793183	NS64
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	5.41457	50.8	chromosome:NZ_CP010133.1/CP010133.1	-	1	5507	5156	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252418	GCA_001900355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/355/GCA_001900355.1_ASM190035v1	-	C11
Enterobacter kobei	208224	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.08803	54.8	-	JZXR01	77	5000	4766	3/19/15	4/3/17	Contig	JCVI	SAMN03283676	GCA_000957385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/385/GCA_000957385.1_ASM95738v1	-	44593
Nitrospira sp. bin75	1916149	PRJNA326328	326328	Nitrospirae	Nitrospira	3.03831	56.2	-	MPMZ01	115	-	-	8/1/17	8/1/17	Contig	GEOMAR Helmholtz Centre for Ocean Research Kiel	SAMN05959520	GCA_002238765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/765/GCA_002238765.1_ASM223876v1	28696422	-
Thalassobius mediterraneus	340021	PRJEB18818	360799	Proteobacteria	Alphaproteobacteria	3.40555	58.7	-	FTNX01	25	3270	3180	1/14/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421685	GCA_900156595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/595/GCA_900156595.1_IMG-taxon_2681813506_annotated_assembly	-	DSM 16398
Pseudoalteromonas issachenkonii	152297	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.67453	39.9	-	DBNI01	132	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455245	GCA_002297745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/745/GCA_002297745.1_ASM229774v1	28894102	-
Mycobacterium saopaulense	1578165	PRJNA354248	354248	Terrabacteria group	Actinobacteria	5.20032	64.6	-	MVII01	103	5314	5077	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064258	GCA_002086715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/715/GCA_002086715.1_ASM208671v1	-	CCUG 66554
Nitrosomonas ureae	44577	PRJEB17008	351161	Proteobacteria	Betaproteobacteria	3.33718	44.4	-	FOFX01	143	3086	2868	10/29/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421510	GCA_900111055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/055/GCA_900111055.1_IMG-taxon_2675903039_annotated_assembly	-	Nm9
Lysobacter enzymogenes	69	PRJEB16544	349847	Proteobacteria	Gammaproteobacteria	6.26395	69.3	-	FNOG01	23	5086	4887	10/22/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421681	GCA_900106525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/525/GCA_900106525.1_IMG-taxon_2675903697_annotated_assembly	-	ATCC 29487
Candidatus Kryptobacter tengchongensis	1643429	PRJEB11721	301870	FCB group	Candidatus Kryptonia	1.66664	36.4	-	CZVV01	198	1639	1412	11/11/15	4/4/17	Scaffold	DOE - Joint Genome Institute	SAMN03436196	GCA_001536105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/105/GCA_001536105.1_JGI_assembly	-	JGI-25
Alishewanella sp. 32-51-5	1970315	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	2.17725	51	-	NCDK01	838	2576	2251	8/16/17	8/16/17	Scaffold	None	SAMN06622374	GCA_002280155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/155/GCA_002280155.1_ASM228015v1	-	-
Bradyrhizobium lablabi	722472	PRJEB18344	355740	Proteobacteria	Alphaproteobacteria	8.15097	62.3	chromosome I:NZ_LT670845.1/LT670845.1	-	1	7687	7396	12/2/16	3/18/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05444321	GCA_900142345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/345/GCA_900142345.1_IMG-taxon_2698536699_annotated_assembly	-	MT34
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	4.80716	50.8	chromosome:NZ_CP010171.1/CP010171.1	-	1	4907	4560	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252434	GCA_001900455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/455/GCA_001900455.1_ASM190045v1	-	H7
Acidimicrobium sp. BACL17 MAG-120924-bin0	1655565	PRJNA273799	273799	Terrabacteria group	Actinobacteria	1.54341	52.4	-	LIAP01	451	1769	1409	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741950	GCA_001439005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/005/GCA_001439005.1_ASM143900v1	-	-
Lactobacillus parakefiri DSM 10551	1423787	PRJNA222257	222257	Terrabacteria group	Firmicutes	4.87232	42.6	-	AZEN01	421	4565	4565	11/6/15	11/6/15	Scaffold	Shanghai Majorbio	SAMN02369468	GCA_001434215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/215/GCA_001434215.1_ASM143421v1	26415554	DSM 10551
Lactobacillus aviarius	1606	PRJNA316009	316009	Terrabacteria group	Firmicutes	1.614	40.2	-	LVKF01	66	1563	1469	5/25/16	5/24/17	Contig	University of Minnesota	SAMN04573024	GCA_001652115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/115/GCA_001652115.2_ASM165211v2	-	UMNLAv4
Lactobacillus taiwanensis	508451	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.24711	34.1	-	NGNX01	64	2334	2088	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848433	GCA_002253065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/065/GCA_002253065.1_ASM225306v1	-	609q
Lactobacillus parabuchneri DSM 5707 = NBRC 107865	1423784	PRJDB1355	231412	Terrabacteria group	Firmicutes	2.55447	43.4	-	BCVT01	98	2389	2299	2/27/16	4/5/17	Contig	National Institute of Technology and Evaluation	SAMD00046916	GCA_001591885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/885/GCA_001591885.1_ASM159188v1	-	NBRC 107865
Ferrovum sp. 21-44-67	1970375	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	1.9223	44	-	NCBL01	40	1943	1851	8/16/17	8/16/17	Contig	None	SAMN06622425	GCA_002255765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/765/GCA_002255765.1_ASM225576v1	-	-
Curvibacter sp. GWA2_63_95	1797746	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	3.88003	62.3	-	MGPB01	40	3656	3568	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314158	GCA_001795455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/455/GCA_001795455.1_ASM179545v1	27774985	-
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	4.80516	50.8	chromosome:NZ_CP010176.1/CP010176.1	-	1	4900	4619	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252436	GCA_001900475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/475/GCA_001900475.1_ASM190047v1	-	H10
Altererythrobacter sp. 66-12	1895714	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	2.64305	66.2	-	MKSE01	23	2601	2418	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660521	GCA_001897135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/135/GCA_001897135.1_ASM189713v1	-	-
Phycicoccus sp. Root101	1736421	PRJNA297942	297942	Terrabacteria group	Actinobacteria	4.38488	71.1	-	LMCM01	12	4090	3977	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04155690	GCA_001426245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/245/GCA_001426245.1_Root101	26633631	Root101
Phenylobacterium sp. Root1277	1736442	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	4.2676	68	-	LMDZ01	11	4157	4059	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04155711	GCA_001425915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/915/GCA_001425915.1_Root1277	26633631	Root1277
Aureimonas sp. Leaf454	1736381	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.79718	67.1	-	LMQT01	25	4411	4291	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151771	GCA_001424685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/685/GCA_001424685.1_Leaf454	26633631	Leaf454
Rathayibacter sp. Leaf185	1736292	PRJNA297956	297956	Terrabacteria group	Actinobacteria	4.10552	71.2	-	LMPP01	9	3885	3780	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151672	GCA_001423885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/885/GCA_001423885.1_Leaf185	-	Leaf185
Agromyces sp. Soil535	1736390	PRJNA298127	298127	Terrabacteria group	Actinobacteria	4.8273	70	-	LMRW01	29	4565	4390	11/2/15	4/11/17	Contig	ETH Zurich	SAMN04155655	GCA_001428255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/255/GCA_001428255.1_Soil535	26633631	Soil535
Agreia sp. Leaf335	1736340	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.55053	66.3	-	LMOQ01	5	3402	3313	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151730	GCA_001423605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/605/GCA_001423605.1_Leaf335	26633631	Leaf335
Plantibacter sp. H53	1827323	PRJNA317656	317656	Terrabacteria group	Actinobacteria	4.01278	69.4	-	LWCT01	51	3766	3659	5/24/16	4/12/17	Contig	UC Berkeley	SAMN04622669	GCA_001650455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/455/GCA_001650455.1_ASM165045v1	-	H53
Bordetella pseudohinzii	1331258	PRJNA310226	310226	Proteobacteria	Betaproteobacteria	4.53113	66.6	-	LRSQ01	92	4275	4118	2/3/16	4/11/17	Contig	Pennsylvania State University	SAMN04448472	GCA_001548495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/495/GCA_001548495.1_ASM154849v1	-	CWR-1
Kocuria kristinae	37923	PRJNA278175	278175	Terrabacteria group	Actinobacteria	2.28077	71.8	-	LDRE01	204	2064	1905	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401339	GCA_001476145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/145/GCA_001476145.1_ASM147614v1	26793183	RSA5
Duganella sp. Leaf61	1736227	PRJNA297956	297956	Proteobacteria	Betaproteobacteria	6.23126	63.5	-	LMLM01	33	5384	5142	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151607	GCA_001421905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/905/GCA_001421905.1_Leaf61	26633631	Leaf61
Mycobacterium gordonae	1778	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.74619	67	-	LZLX01	353	6316	5848	6/17/16	4/13/17	Contig	JCVI	SAMN04634194	GCA_001673475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/475/GCA_001673475.1_ASM167347v1	-	1275229.4
Candidatus Symbiothrix dinenymphae	467085	PRJDB3425	293966	FCB group	Bacteroidetes/Chlorobi group	1.77775	45.3	-	BBRW01	1255	-	-	8/25/15	4/14/16	Contig	"Microbe Division (RIKEN BRC JCM), RIKEN BioResource Center"	SAMD00024445	GCA_001431125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/125/GCA_001431125.1_ASM143112v1	26079531	D9-6h
Methanosaeta sp. ASM2	1917477	PRJNA338276	338276	Euryarchaeota	Methanomicrobia	1.17114	54.9	-	NOLH01	249	1350	1350	8/16/17	8/16/17	Contig	The Ohio State University	SAMN05908754	GCA_002256665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/665/GCA_002256665.1_ASM225666v1	-	-
Candidatus Cloacimonas sp. 4484_209	1968525	PRJNA362212	362212	FCB group	Candidatus Cloacimonetes	2.42135	36.1	-	MZGI01	272	2550	2441	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06560460	GCA_002084915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/915/GCA_002084915.1_ASM208491v1	-	-
Labrenzia alba	311410	PRJEB10059	297538	Proteobacteria	Alphaproteobacteria	6.86734	56.4	-	CXWC01	21	6343	6208	10/1/15	4/11/17	Contig	UVEG	SAMEA3495743	GCA_001406035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/035/GCA_001406035.1_L.albaCECT5096_Spades_Prokka	-	CECT 5096
Mycobacterium peregrinum	43304	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.53699	66.4	-	LZIB01	72	6280	6126	6/17/16	4/13/17	Contig	JCVI	SAMN04634257	GCA_001667205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/205/GCA_001667205.1_ASM166720v1	-	ACS819
Pseudomonas congelans	200452	PRJNA387592	387592	Proteobacteria	Gammaproteobacteria	5.85567	59.2	-	NQYA01	220	5401	5112	9/20/17	9/22/17	Contig	Max Planck Institute 	SAMN07158955	GCA_002318745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/745/GCA_002318745.1_ASM231874v1	28880925	NL.P123
Methylomonas koyamae	702114	PRJNA315276	315276	Proteobacteria	Gammaproteobacteria	5.11524	56.1	-	LUUJ01	145	4709	4476	5/16/16	4/12/17	Contig	Ghent University	SAMN04555166	GCA_001644135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/135/GCA_001644135.1_ASM164413v1	-	R-45378
Lactobacillus kefiri	33962	PRJNA375758	375758	Terrabacteria group	Firmicutes	2.58779	41.6	-	NCWS01	388	2446	2296	8/29/17	8/30/17	Contig	SysMilk	SAMN06718481	GCA_002276955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/955/GCA_002276955.1_ASM227695v1	-	OG2
Lactobacillus paracollinoides DSM 15502 = JCM 11969	1423785	PRJNA222257	222257	Terrabacteria group	Firmicutes	3.47664	46.9	-	AZFD01	202	3149	2947	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369376	GCA_001435115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/115/GCA_001435115.1_ASM143511v1	26415554	DSM 15502
Lactobacillus lindneri DSM 20690 = JCM 11027	1122148	PRJDB761	243673	Terrabacteria group	Firmicutes	1.43685	34.1	-	BBAF01	28	1489	1188	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00000414	GCA_001311115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/115/GCA_001311115.1_ASM131111v1	-	JCM 11027
Cobetia sp. UBA4515	1946381	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.78024	62	-	DGMP01	177	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450766	GCA_002388455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/455/GCA_002388455.1_ASM238845v1	28894102	-
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	4.73549	50.8	chromosome:NZ_CP010177.1/CP010177.1	-	1	4810	4539	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252437	GCA_001900885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/885/GCA_001900885.1_ASM190088v1	-	H14
Granulicatella sp. 572.rep1_STHE	1725361	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.03157	37.5	-	JVBO01	46	1991	1908	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197774	GCA_001073445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/445/GCA_001073445.1_ASM107344v1	26230489	572.rep1_STHE
Brachybacterium sp. HMSC06H03	1581127	PRJNA269896	269896	Terrabacteria group	Actinobacteria	3.499	72.2	-	LWOB01	337	3299	2950	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03434234	GCA_001807385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/385/GCA_001807385.1_ASM180738v1	-	HMSC06H03
Helicobacter ailurogastricus	1578720	PRJEB7933	293179	Proteobacteria	delta/epsilon subdivisions	1.58446	47.6	-	CDMN01	71	1605	1473	8/17/15	4/11/17	Scaffold	UGENT	SAMEA3172284	GCA_001283105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/105/GCA_001283105.1_gastric_feline_helicobacters	-	-
Pantoea septica	472695	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.17082	59.4	-	DDAR01	313	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452159	GCA_002332665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/665/GCA_002332665.1_ASM233266v1	28894102	-
Mangrovimonas sp. DI 80	1779330	PRJNA348568	348568	FCB group	Bacteroidetes/Chlorobi group	3.73028	38.3	-	MSDT01	17	3249	3187	1/30/17	4/17/17	Contig	institute of microbial technology	SAMN05912834	GCA_001975575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/575/GCA_001975575.1_ASM197557v1	-	DI 80
Streptomyces antibioticus JCM 4620	1306178	PRJDB988	245289	Terrabacteria group	Actinobacteria	4.10932	68.9	-	BBHQ01	3466	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00017028	GCA_001315405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/405/GCA_001315405.1_ASM131540v1	-	JCM 4620
Pseudomonas thivervalensis	86265	PRJNA298287	298287	Proteobacteria	Gammaproteobacteria	6.55138	61.2	-	LRSO01	23	5864	5706	5/5/16	4/12/17	Contig	Institut de Recherches Microbiologiques - Wiame	SAMN04017594	GCA_001637285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/285/GCA_001637285.1_ASM163728v1	27007713	LMG 21626
Roseivirga sp. UBA4591	1947388	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.9891	40.6	-	DGJR01	290	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452773	GCA_002387525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/525/GCA_002387525.1_ASM238752v1	28894102	-
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	4.73362	50.8	chromosome:NZ_CP010230.1/CP010230.1	-	1	4809	4541	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252452	GCA_001900925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/925/GCA_001900925.1_ASM190092v1	-	S21
Nautella italica	481446	PRJEB17312	351518	Proteobacteria	Alphaproteobacteria	4.0569	60	-	FOOZ01	35	3858	3718	10/30/16	4/14/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488019	GCA_900113345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/345/GCA_900113345.1_IMG-taxon_2622736589_annotated_assembly	-	DSM 26436
uncultured Dysgonomonas sp.	206096	PRJEB13527	390595	FCB group	Bacteroidetes/Chlorobi group	5.21947	39.4	-	FLUM01	1	4559	4485	6/15/17	6/15/17	Scaffold	Genoscope CEA	SAMEA3931511	GCA_900079725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/725/GCA_900079725.1_APW_PRJEB13527_v1	-	-
Lactobacillus agilis	1601	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.18782	41.3	-	LYQP01	116	2215	2007	7/14/17	7/17/17	Scaffold	University of Minnesota	SAMN04498971	GCA_002218575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/575/GCA_002218575.1_ASM221857v1	-	UMNLA7
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	4.88621	50.8	chromosome:NZ_CP010229.1/CP010229.1	-	1	4991	4709	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252451	GCA_001901465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/465/GCA_001901465.1_ASM190146v1	-	S10
Trabulsiella odontotermitis	379893	PRJNA291074	291074	Proteobacteria	Gammaproteobacteria	4.5901	54.7	-	LIFX01	42	4390	4165	9/23/15	4/4/17	Scaffold	IBT-UNAM	SAMN03943323	GCA_001297775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/775/GCA_001297775.1_ASM129777v1	26543120	TbOT1.10
uncultured Acidilobus sp. JCHS	1410576	PRJNA221622	221622	TACK group	Crenarchaeota	1.47666	59.2	-	AYMD01	13	1683	1634	11/5/13	11/5/13	Contig	Montana State University	SAMN02364256	GCA_000495735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/735/GCA_000495735.1_Acidilobus_sp._JCHS	-	-
Paracoccus sanguinis	1545044	PRJNA254739	254739	Proteobacteria	Alphaproteobacteria	3.65302	70.1	-	JRKQ01	265	3570	3323	10/6/14	4/9/17	Contig	Wadsworth Center / NYSDOH	SAMN02927206	GCA_000763845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/845/GCA_000763845.1_ASM76384v1	-	5503
Pseudomonas trivialis	200450	PRJNA338684	338684	Proteobacteria	Gammaproteobacteria	5.77127	60.9	-	MDFJ01	60	5275	4971	9/18/16	4/13/17	Contig	Ottawa Research and Development Center	SAMN05560640	GCA_001730655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/655/GCA_001730655.1_ASM173065v1	-	LMG 21464
Actinobaculum suis	1657	PRJNA287444	287444	Terrabacteria group	Actinobacteria	2.35866	57.8	-	LFUS01	59	1952	1819	7/21/15	4/10/17	Scaffold	School of Veterinary Medicine and Animal Science / University of Sao Paulo	SAMN03783260	GCA_001183565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/565/GCA_001183565.1_ASM118356v1	-	U311
Mycobacterium conceptionense	451644	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.39262	66.5	-	LZHX01	103	6176	5991	6/17/16	4/5/17	Contig	JCVI	SAMN04634264	GCA_001667235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/235/GCA_001667235.1_ASM166723v1	-	ACS1953
Methylobacterium aquaticum	270351	PRJNA278211	278211	Proteobacteria	Alphaproteobacteria	6.32208	70.9	-	LDRL01	487	5845	5479	12/22/15	4/11/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401376	GCA_001476615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/615/GCA_001476615.1_ASM147661v1	26793183	NS228
Bacillus marisflavi	189381	PRJNA277419	277419	Terrabacteria group	Firmicutes	4.37484	48.6	-	LDWO01	68	4508	4312	6/24/15	4/10/17	Contig	University of Malaya	SAMN03751787	GCA_001038985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/985/GCA_001038985.1_ASM103898v1	-	LK26
Mycobacterium sinense	875328	PRJNA305922	305922	Terrabacteria group	Actinobacteria	4.57338	68.4	-	LZIM01	116	4372	4159	6/17/16	4/13/17	Contig	JCVI	SAMN04692039	GCA_001667395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/395/GCA_001667395.1_ASM166739v1	-	852014-51077_SCH5608930-b
Bacillus circulans	1397	PRJNA395369	395369	Terrabacteria group	Firmicutes	5.09634	35.3	-	NPBQ01	180	4868	4748	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372690	GCA_002271985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/985/GCA_002271985.1_assembly-7521-2_v1	-	7521-2
Mycobacterium heraklionense	512402	PRJNA305922	305922	Terrabacteria group	Actinobacteria	4.71897	67.6	-	LZME01	161	4522	4223	6/17/16	4/13/17	Contig	JCVI	SAMN04634187	GCA_001673575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/575/GCA_001673575.1_ASM167357v1	-	1211594.5
Marinitoga sp. 4572_148	1971619	PRJNA362212	362212	Thermotogae	Thermotogae	1.03165	28.5	-	NBLQ01	104	1133	1019	4/10/17	9/7/17	Scaffold	The University of Texas at Austin	SAMN06628314	GCA_002084615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/615/GCA_002084615.1_ASM208461v1	-	-
Escherichia coli	562	PRJNA304360	304360	Proteobacteria	Gammaproteobacteria	4.83927	50.8	chromosome:NZ_CP013483.1/CP013483.1	-	1	4930	4589	11/1/16	2/25/17	Complete Genome	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University, Hangzhou, Zhejiang, China"	SAMN04299569	GCA_001860505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/505/GCA_001860505.1_ASM186050v1	-	Y5
Staphylococcus succinus	61015	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.74277	33	-	LNPF01	31	2569	2519	9/28/16	4/13/17	Contig	Tufts University	SAMN04244265	GCA_001747705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/705/GCA_001747705.1_ASM174770v1	-	BC15
Streptomyces europaeiscabiei	146819	PRJNA309850	309850	Terrabacteria group	Actinobacteria	10.5	70.6	-	LRTR01	931	9512	8176	2/5/16	3/13/17	Contig	University of Florida	SAMN04441027	GCA_001550375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/550/375/GCA_001550375.1_ASM155037v1	-	96-14
Staphylococcus argenteus	985002	PRJNA227677	227677	Terrabacteria group	Firmicutes	2.79539	32.3	-	JGHK01	64	2802	2604	3/27/14	7/24/17	Contig	Broad Institute	SAMN02402601	GCA_000602805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/805/GCA_000602805.1_Stap_aure_F87619_V1	-	F87619
Yersinia wautersii	1341643	PRJEB3992	221822	Proteobacteria	Gammaproteobacteria	3.06794	48.4	-	CBLJ01	3382	-	-	9/25/13	1/30/15	Scaffold	IP	SAMEA2271993	GCA_000493435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/435/GCA_000493435.1_1_12-219N1	-	12-219N1
Comamonas thiooxydans	363952	PRJNA377849	377849	Proteobacteria	Betaproteobacteria	5.98077	60.8	-	MZNW01	1035	6085	5156	6/9/17	6/12/17	Contig	Qingdao Agriculture University	SAMN06473338	GCA_002189475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/475/GCA_002189475.1_ASM218947v1	-	QT12
Acetobacter orientalis	146474	PRJNA253128	253128	Proteobacteria	Alphaproteobacteria	2.95783	52.4	-	JOPK01	122	2642	2514	5/19/17	5/24/17	Contig	Cornell University	SAMN02866239	GCA_002153735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/735/GCA_002153735.1_ASM215373v1	-	DsW_061
Thermoproteus sp. CIS_19	1714257	PRJNA295311	295311	TACK group	Crenarchaeota	1.47162	60.5	-	LOCA01	78	1702	1286	1/15/16	1/15/16	Scaffold	Montana State University	SAMN04045694	GCA_001516665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/665/GCA_001516665.1_ASM151666v1	-	-
Vulcanisaeta sp. JCM 16159	1295371	PRJDB850	243750	TACK group	Crenarchaeota	2.24904	45.3	-	BBDN01	28	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000531	GCA_001316265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/265/GCA_001316265.1_ASM131626v1	-	JCM 16159
Kosakonia oryzae	497725	PRJEB17153	351377	Proteobacteria	Gammaproteobacteria	5.38046	54	-	FOKO01	15	5154	4963	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216286	GCA_900112145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/145/GCA_900112145.1_IMG-taxon_2675902965_annotated_assembly	-	CGMCC 1.7012
Terrabacter sp. Root181	1736484	PRJNA297942	297942	Terrabacteria group	Actinobacteria	4.93921	71.4	-	LMHU01	12	4568	4419	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04155753	GCA_001428505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/505/GCA_001428505.1_Root181	26633631	Root181
Elizabethkingia sp. G4070	1867263	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	4.15401	35.6	-	MAHX01	21	3751	3645	3/8/17	3/11/17	Contig	CDC	SAMN05277871	GCA_002023715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/715/GCA_002023715.1_ASM202371v1	-	G4070
Aliivibrio wodanis	80852	PRJNA302718	302718	Proteobacteria	Gammaproteobacteria	4.66079	38.2	-	LNRK01	83	4279	4103	2/10/16	4/4/17	Contig	University of Cambridge	SAMN04279305	GCA_001557865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/865/GCA_001557865.1_ASM155786v1	-	CL4
Moritella viscosa	80854	PRJEB16014	348508	Proteobacteria	Gammaproteobacteria	5.0104	39.3	-	FPLF01	170	4554	4274	11/24/16	4/11/17	Contig	UNIVERSITY OF TROMSO	SAMEA4520417	GCA_900120015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/015/GCA_900120015.1_clc.v6.5.F57.01	-	-
Tatlockia micdadei	451	PRJNA281303	281303	Proteobacteria	Gammaproteobacteria	3.27901	40.4	-	LCUB01	27	2942	2853	5/19/16	4/12/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03486958	GCA_001648625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/625/GCA_001648625.1_ASM164862v1	-	ATCC 33218
Photobacterium kishitanii	318456	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	5.12587	38.7	-	JZTE01	109	4597	4134	3/10/15	4/3/17	Contig	FDA/CFSAN	SAMN03295465	GCA_000950135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/135/GCA_000950135.1_CFSAN029417_01.0	25931609	GCSL-A1-1
Halomonas meridiana	29570	PRJEB18396	355732	Proteobacteria	Gammaproteobacteria	3.86361	57	-	FSRR01	2	3744	3524	12/14/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05878442	GCA_900142865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/865/GCA_900142865.1_IMG-taxon_2698536817_annotated_assembly	-	ACAM 255
Aneurinibacillus migulanus	47500	PRJNA274583	274583	Terrabacteria group	Firmicutes	6.28459	43.1	-	JYBO01	134	6358	5991	2/20/15	4/3/17	Scaffold	University of Neuchatel	SAMN03329520	GCA_000878905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/905/GCA_000878905.1_Amig1.0	25838489	NCTC 7096
Mycobacterium immunogenum	83262	PRJNA294421	294421	Terrabacteria group	Actinobacteria	5.72355	64	-	LJFR01	37	5750	5571	9/22/15	4/4/17	Contig	US EPA	SAMN04025495	GCA_001296255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/255/GCA_001296255.1_ASM129625v1	-	H074
Frigoribacterium sp. Leaf164	1736282	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.28758	73.3	-	LMOX01	6	3020	2898	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151662	GCA_001423665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/665/GCA_001423665.1_Leaf164	26633631	Leaf164
Bacillus badius	1455	PRJNA312128	312128	Terrabacteria group	Firmicutes	4.05976	43.6	-	LVTO01	74	4192	3994	4/25/16	4/12/17	Contig	CSIR-Institute of Mircrobial Technology	SAMN04494516	GCA_001632185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/185/GCA_001632185.1_ASM163218v1	-	DSM 5610
Winogradskyella sp. RHA_55	1249933	PRJEB16378	349318	FCB group	Bacteroidetes/Chlorobi group	3.68845	33.6	chromosome I:NZ_LT629774.1/LT629774.1	-	1	3222	3142	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489797	GCA_900105425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/425/GCA_900105425.1_IMG-taxon_2630968293_annotated_assembly	-	RHA_55
Escherichia coli	562	PRJNA341475	341475	Proteobacteria	Gammaproteobacteria	4.58364	50.8	chromosome:NZ_CP017100.1/CP017100.1	-	1	4719	4390	9/13/16	2/25/17	Complete Genome	New England Biolabs	SAMN05725120	GCA_001723505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/505/GCA_001723505.1_ASM172350v1	-	K-12 NEB 5-alpha
Pseudomonas xanthomarina DSM 18231	1403346	PRJEB18235	355538	Proteobacteria	Gammaproteobacteria	4.30885	60.3	-	FQXA01	17	3986	3854	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02744645	GCA_900129835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/835/GCA_900129835.1_IMG-taxon_2687453778_annotated_assembly	-	DSM 18231
Mesorhizobium plurifarium	69974	PRJEB6720	295826	Proteobacteria	Alphaproteobacteria	7.10372	64.1	-	CCND01	52	6816	6638	9/16/15	4/11/17	Scaffold	IRD	SAMEA2677842	GCA_001298755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/755/GCA_001298755.1_Mesorhizobium_plurifarium_ORS1032T_genome_assembly	-	-
Aeromonas allosaccharophila	656	PRJNA345312	345312	Proteobacteria	Gammaproteobacteria	4.72182	58.3	-	MRZP01	199	4401	3943	12/19/16	12/19/16	Contig	Masaryk University	SAMN05860754	GCA_001908545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/545/GCA_001908545.1_ASM190854v1	-	CCM 4363
Enterobacter ludwigii	299767	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.2045	54.4	-	LEER01	75	5110	4886	6/9/15	4/3/17	Contig	JCVI	SAMN03732724	GCA_001022805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/805/GCA_001022805.1_ASM102280v1	-	GN02730
Pseudomonas balearica DSM 6083	1123016	PRJEB16203	348955	Proteobacteria	Gammaproteobacteria	4.36512	64.7	-	FNHO01	26	4109	3951	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660875	GCA_900103375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/375/GCA_900103375.1_IMG-taxon_2602042028_annotated_assembly	-	DSM 6083
Morococcus cerebrosus	1056807	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	2.50984	51.3	-	JVLZ01	610	2457	2199	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197503	GCA_001064475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/475/GCA_001064475.1_ASM106447v1	26230489	313_NMEN
Chromobacterium subtsugae	251747	PRJNA280629	280629	Proteobacteria	Betaproteobacteria	4.80358	64.8	-	LCWQ01	61	4495	4355	6/5/15	4/3/17	Contig	Midwestern University	SAMN03649651	GCA_001020515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/515/GCA_001020515.1_ASM102051v1	26358592	MWU2576
Pseudomonas flexibilis	706570	PRJEB18874	360781	Proteobacteria	Gammaproteobacteria	3.76085	65.8	-	FTMC01	42	3577	3445	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421672	GCA_900155995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/995/GCA_900155995.1_IMG-taxon_2681812811_annotated_assembly	-	ATCC 29606
Pseudomonas frederiksbergensis	104087	PRJNA258657	258657	Proteobacteria	Gammaproteobacteria	6.56927	60.5	-	JQGJ02	65	6024	5771	12/16/14	4/10/17	Contig	UDRI	SAMN03001946	GCA_000802155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/155/GCA_000802155.2_ASM80215v2	26184950	SI8
Fusobacterium hwasookii ChDC F128	1216362	PRJNA171181	171181	Fusobacteria	Fusobacteriia	2.36168	27	-	ALVD01	30	2274	2150	8/27/12	3/30/17	Contig	Chosun University	SAMN02469578	GCA_000292935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/935/GCA_000292935.1_ASM29293v1	23105064	ChDC F128
Leisingera sp. ANG-DT	1577897	PRJNA269051	269051	Proteobacteria	Alphaproteobacteria	4.59599	62.6	-	JWLE01	91	4367	4243	1/2/15	4/10/17	Scaffold	University of Connecticut	SAMN03246060	GCA_000813785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/785/GCA_000813785.1_ASM81378v1	25755651	ANG-DT
Clostridium baratii	1561	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.0862	28	-	CZBO01	30	2953	2847	10/1/15	4/10/17	Contig	SC	SAMEA3545419	GCA_001405755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/755/GCA_001405755.1_14207_7_79	-	2789STDY5834956
Citrobacter braakii	57706	PRJNA254477	254477	Proteobacteria	Gammaproteobacteria	5.04079	52	-	JRHL01	17	4936	4691	11/23/14	4/2/17	Contig	Canadian Food Inspection Agency	SAMN03025291	GCA_000786275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/275/GCA_000786275.1_ASM78627v1	25573940	GTA-CB04
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.55623	50.8	-	MPQB01	49	2478	2393	3/6/17	3/9/17	Contig	Harvard University	SAMN06016246	GCA_002020395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/395/GCA_002020395.1_ASM202039v1	-	-
Bdellovibrio sp. 28-41-41	1970323	PRJNA379596	379596	Proteobacteria	Oligoflexia	4.01527	41.1	-	NCGL01	153	4006	3907	8/16/17	8/16/17	Scaffold	None	SAMN06622295	GCA_002256935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/935/GCA_002256935.1_ASM225693v1	-	-
Bacillus aryabhattai B8W22	1358420	PRJNA211969	211969	Terrabacteria group	Firmicutes	5.09548	38	-	JYOO01	72	5240	4923	3/19/15	4/3/17	Contig	Centre for Cellular and Molecular Biology	SAMN03159255	GCA_000956595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/595/GCA_000956595.1_ASM95659v1	19643890	B8W22
Pseudomonas mediterranea	183795	PRJNA290284	290284	Proteobacteria	Gammaproteobacteria	6.23124	61.3	-	LJWU01	101	5546	5337	10/23/15	4/11/17	Scaffold	Technological Educational Institute of Crete	SAMN03879932	GCA_001412005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/005/GCA_001412005.1_ASM141200v1	26300874	TEIC1022
Elizabethkingia miricola	172045	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	4.29381	35.8	-	LSGQ01	33	4003	3899	6/22/16	4/5/17	Contig	CDC	SAMD00016624	GCA_001675285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/285/GCA_001675285.1_ASM167528v1	-	GTC_862
Mycobacterium kyorinense	487514	PRJNA299467	299467	Terrabacteria group	Actinobacteria	5.60667	66.8	-	LQPE01	180	5543	5252	4/20/17	4/22/17	Contig	University of Trento	SAMN04216935	GCA_002101735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/735/GCA_002101735.1_ASM210173v1	-	DSM 45166
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	7.10417	44.1	-	MKQO01	142	6410	6219	1/18/17	4/6/17	Contig	Cornell University	SAMN05772517	GCA_001954335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/335/GCA_001954335.1_ASM195433v1	-	FSL H3-0280
Lactobacillus paraplantarum	60520	PRJNA314459	314459	Terrabacteria group	Firmicutes	1.80977	44.7	-	LUHM01	5	1725	1642	6/9/16	4/12/17	Contig	CERELA-CONICET	SAMN04535183	GCA_001660655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/655/GCA_001660655.1_ASM166065v1	-	CRL 1905
Achromobacter sp. Root83	1736602	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	6.21279	65.9	-	LMIU01	28	5697	5540	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155871	GCA_001428845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/845/GCA_001428845.1_Root83	26633631	Root83
Escherichia coli	562	PRJNA325730	325730	Proteobacteria	Gammaproteobacteria	4.6177	50.8	chromosome:NZ_CP016182.2/CP016182.2	-	1	4762	4353	7/8/16	4/5/17	Complete Genome	UNIVERSITY OF MALAYA	SAMN05252777	GCA_001682305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/305/GCA_001682305.2_ASM168230v2	-	EC590
Thermoactinomyces sp. DSM 45892	1882753	PRJEB16549	349852	Terrabacteria group	Firmicutes	3.19306	41.7	-	FNPL01	53	3179	3062	10/22/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444416	GCA_900107305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/305/GCA_900107305.1_IMG-taxon_2693429913_annotated_assembly	-	DSM 45892
Bacillus thermoamylovorans	35841	PRJNA270599	270599	Terrabacteria group	Firmicutes	3.82603	37.3	-	JXLU01	151	3644	3395	2/4/15	4/10/17	Scaffold	University of Groningen	SAMN03267285	GCA_000832185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/185/GCA_000832185.1_ASM83218v1	25814599	B4167
Sulfuricurvum sp. RIFCSPHIGHO2_02_FULL_43_9	1802242	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.99978	42.6	-	MIBO01	451	2225	1463	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315543	GCA_001829575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/575/GCA_001829575.1_ASM182957v1	27774985	-
Salegentibacter sp. UBA1130	1947451	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.054	36.7	-	DCAP01	42	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06457045	GCA_002311535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/535/GCA_002311535.1_ASM231153v1	28894102	-
Muricauda sp. UBA4497	1946967	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.93092	42.7	-	DGNH01	383	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450408	GCA_002388855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/855/GCA_002388855.1_ASM238885v1	28894102	-
Luteibacter sp. 9133	1500891	PRJNA247909	247909	Proteobacteria	Gammaproteobacteria	4.50116	64.9	-	JUHO01	1	3956	3840	12/9/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02786969	GCA_000800155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/155/GCA_000800155.1_ASM80015v1	-	9133
Caulobacter henricii	69395	PRJNA247561	247561	Proteobacteria	Alphaproteobacteria	4.98072	67.1	-	JQLZ01	21	4552	4437	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02787155	GCA_000744465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/465/GCA_000744465.1_ASM74446v1	-	OK261
Acetobacter malorum	178901	PRJNA288385	288385	Proteobacteria	Alphaproteobacteria	3.6413	57.4	-	LHZX01	319	3421	3156	3/7/16	4/12/17	Contig	Ghent University	SAMN03799298	GCA_001581035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/035/GCA_001581035.1_ASM158103v1	-	LMG 1699
Bifidobacterium scardovii JCM 12489 = DSM 13734	1150461	PRJNA279230	279230	Terrabacteria group	Actinobacteria	3.14395	64.6	-	LBIB01	57	2541	2374	5/7/15	4/10/17	Contig	"The First Affiliated Hospital, College of Medicine, Zhejiang University"	SAMN03443793	GCA_001005065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/065/GCA_001005065.1_ASM100506v1	-	DSM 13734
Serratia nematodiphila	458197	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.20398	59.7	-	NEYQ01	37	4926	4769	6/9/17	6/12/17	Contig	JCVI	SAMN06812671	GCA_002185265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/265/GCA_002185265.1_ASM218526v1	-	ARLG-2977
Staphylococcus agnetis	985762	PRJNA383665	383665	Terrabacteria group	Firmicutes	2.5277	35.4	-	NEDS01	73	2507	2400	4/28/17	5/3/17	Contig	University of Copenhagen	SAMN06771149	GCA_002114365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/365/GCA_002114365.1_ASM211436v1	-	722_230714_2_5_spleen
Cellulosimicrobium sp. CUA-896	1517881	PRJNA344658	344658	Terrabacteria group	Actinobacteria	3.72709	74.6	-	MKKH01	79	3502	2486	1/11/17	4/16/17	Contig	"Scripps Institution of Oceanography, UCSD"	SAMN05830216	GCA_001942335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/335/GCA_001942335.1_ASM194233v1	27902408	CUA-896
Desulfobacula sp. RIFOXYB2_FULL_45_6	1797912	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.37559	44.5	-	MGTM01	707	2537	1718	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316168	GCA_001799455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/799/455/GCA_001799455.1_ASM179945v1	27774985	-
Clostridium sulfidigenes	318464	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.59915	29.9	-	DFWI01	41	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453738	GCA_002380815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/815/GCA_002380815.1_ASM238081v1	28894102	-
Nonlabens ulvanivorans	906888	PRJDB1695	260428	FCB group	Bacteroidetes/Chlorobi group	3.09181	35.2	-	BBMK01	25	2895	2183	9/5/14	4/9/17	Contig	The University of Tokyo	SAMD00017328	GCA_000755285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/285/GCA_000755285.1_ASM75528v1	25395639	JCM 19298
Caballeronia sordidicola	196367	PRJNA355373	355373	Proteobacteria	Betaproteobacteria	7.87214	59.7	-	NBTY01	224	7352	6802	5/16/17	5/24/17	Contig	Pukyong National University	SAMN06075481	GCA_002141475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/475/GCA_002141475.1_ASM214147v1	-	PAMC 26510
Vibrio metoecus	1481663	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.90918	46.8	-	LCUE01	40	3678	3504	10/22/15	4/4/17	Contig	University of Alberta	SAMN03610459	GCA_001402165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/165/GCA_001402165.1_ASM140216v1	26454015	Jul-35
Alteromonas australica	589873	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.57258	44.1	-	DBHG01	252	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455831	GCA_002296105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/105/GCA_002296105.1_ASM229610v1	28894102	-
Shinella sp. DD12	1410620	PRJNA223517	223517	Proteobacteria	Alphaproteobacteria	7.68325	63.4	-	AYLZ02	236	7493	7211	11/14/13	4/9/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02469827	GCA_000496935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/935/GCA_000496935.2_SPAdes3	-	DD12
Streptomyces albidoflavus	1886	PRJNA398273	398273	Terrabacteria group	Actinobacteria	6.98555	73	-	NVPZ01	1114	6718	5703	9/20/17	9/22/17	Contig	The University of Queensland 	SAMN07505020	GCA_002317005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/005/GCA_002317005.1_CMB-CS038	-	38
Lechevalieria aerocolonigenes	68170	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.6372	67.1	-	JOHE01	139	-	-	7/1/14	7/3/14	Scaffold	University of Illinois	SAMN02645473	GCA_000722255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/255/GCA_000722255.1_ASM72225v1	-	NRRL B-16138
Kitasatospora aureofaciens	1894	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.39292	72	-	JODU01	167	7652	7367	7/2/14	8/20/15	Contig	University of Illinois	SAMN02645218	GCA_000720845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/845/GCA_000720845.1_ASM72084v1	-	NRRL B-2183
Saccharothrix sp. ALI-22-I	1933778	PRJNA360629	360629	Terrabacteria group	Actinobacteria	10.3001	70.1	-	MTQP01	69	9350	8674	2/3/17	4/17/17	Contig	Los Alamos National Laboratory	SAMN06213933	GCA_001984175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/175/GCA_001984175.1_ASM198417v1	28087533	ALI-22-I
Streptomyces bikiniensis	1896	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.85886	70.9	-	JOBI01	223	-	-	7/1/14	7/3/14	Scaffold	University of Illinois	SAMN02645389	GCA_000716245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/245/GCA_000716245.1_ASM71624v1	-	NRRL ISP-5581
Streptomyces californicus	67281	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.02305	71.2	-	JNYB01	130	-	-	7/1/14	5/13/16	Scaffold	University of Illinois	SAMN02645302	GCA_000715745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/745/GCA_000715745.1_ASM71574v1	-	NRRL B-3320
Escherichia coli	562	PRJNA286318	286318	Proteobacteria	Gammaproteobacteria	4.73149	50.8	chromosome:NZ_CP013031.1/CP013031.1	-	1	4921	4549	7/5/16	2/25/17	Complete Genome	Universidade Estadual de Campinas	SAMN03768474	GCA_001678925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/925/GCA_001678925.1_ASM167892v1	-	H1827/12
Chromobacterium haemolyticum	394935	PRJNA369804	369804	Proteobacteria	Betaproteobacteria	5.29536	62.6	-	MUKU01	89	4927	4718	4/6/17	4/8/17	Contig	Centers for Disease Control and Prevention	SAMN06294330	GCA_002081825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/825/GCA_002081825.1_ASM208182v1	-	H4137
Synergistes jonesii	2754	PRJNA258235	258235	Synergistetes	Synergistia	2.63595	56.4	-	JQEL01	71	2522	2426	10/11/16	4/13/17	Contig	CSIRO	SAMN02991081	GCA_001757485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/485/GCA_001757485.1_ASM175748v1	-	ATCC 49833
Kitasatospora sp. MY 5-36	1678027	PRJNA288521	288521	Terrabacteria group	Actinobacteria	9.13646	73.5	-	LFVW01	1461	8260	7208	7/20/15	4/11/17	Contig	College	SAMN03801506	GCA_001182915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/915/GCA_001182915.1_ASM118291v1	-	MY 5-36
Bosea sp. 117	1125973	PRJNA225850	225850	Proteobacteria	Alphaproteobacteria	4.63576	68.2	-	JNLC01	17	4299	4200	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841203	GCA_000702305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/305/GCA_000702305.1_ASM70230v1	-	117
Sharpea azabuensis	322505	PRJEB17445	351626	Terrabacteria group	Firmicutes	2.32946	37.1	-	FOTA01	71	2394	2222	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487835	GCA_900114425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/425/GCA_900114425.1_IMG-taxon_2606217758_annotated_assembly	-	KH1P5
Succinivibrio dextrinosolvens	83771	PRJEB17408	351610	Proteobacteria	Gammaproteobacteria	3.12695	38.8	-	FOSF01	178	2819	2604	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487865	GCA_900114195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/195/GCA_900114195.1_IMG-taxon_2626541589_annotated_assembly	-	22B
Streptomyces fradiae ATCC 10745 = DSM 40063	1319510	PRJNA341445	341445	Terrabacteria group	Actinobacteria	6.71631	74.5	-	MIFZ01	352	5938	5420	5/8/17	5/10/17	Scaffold	Fraunhofer Institute for Interfacial Engineering and Biotechnolgy IGB	SAMN05722967	GCA_002119225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/225/GCA_002119225.1_ASM211922v1	-	DSM 40063
Pseudomonas simiae	321846	PRJNA338691	338691	Proteobacteria	Gammaproteobacteria	6.2895	60.3	-	MDFH01	34	5798	5629	9/18/16	4/13/17	Contig	Ottawa Research and Development Center	SAMN05560726	GCA_001730615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/615/GCA_001730615.1_ASM173061v1	-	CCUG 50988
Geomicrobium sp. JCM 19055	1460649	PRJDB1627	243823	Terrabacteria group	Firmicutes	4.09685	41.5	-	BAXL01	48	4735	3524	5/20/14	4/9/17	Contig	"Microbe Division/JCM, RIKEN BioResource Center"	SAMD00000386	GCA_000698185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/185/GCA_000698185.1_ASM69818v1	24948772	JCM 19055
Edwardsiella piscicida	1263550	PRJDB1727	252568	Proteobacteria	Gammaproteobacteria	3.71682	59.8	-	BAYT01	72	3425	3215	5/14/14	4/9/17	Contig	Kochi University	SAMD00000403	GCA_000711155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/155/GCA_000711155.1_ASM71115v1	24926054	JF1305
Gemmatimonas sp. SM23_52	1703359	PRJNA270657	270657	FCB group	Gemmatimonadetes	4.29688	65.5	-	LJUM01	263	3865	3324	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994206	GCA_001303825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/825/GCA_001303825.1_ASM130382v1	25922666	-
Mycoplasma hyosynoviae	29559	PRJNA238374	238374	Terrabacteria group	Tenericutes	0.879068	27	-	JFKK01	57	699	636	5/15/14	4/2/17	Contig	"Newport Laboratories, A Sanofi Company"	SAMN02673694	GCA_000691305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/305/GCA_000691305.1_MhyoNPL2v1.0_of_Mycoplasma_hyosynoviae_strain_NPL2_genome	24903877	NPL2
Devosia sp. Root105	1736423	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	5.85026	65.4	-	LMCR01	21	5646	5557	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155692	GCA_001424865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/865/GCA_001424865.1_Root105	-	Root105
Lonsdalea quercina	71657	PRJEB16653	349910	Proteobacteria	Gammaproteobacteria	3.77926	55.1	-	FNQS01	35	3371	3205	10/22/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02982996	GCA_900107885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/885/GCA_900107885.1_IMG-taxon_2597490349_annotated_assembly	-	ATCC 29281
Aeromonas enteropelogenes	29489	PRJEB7043	267814	Proteobacteria	Gammaproteobacteria	4.33725	60.1	-	CDDE01	27	3964	3805	11/24/14	4/10/17	Scaffold	UCONNMISEQ	SAMEA2752405	GCA_000820205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/205/GCA_000820205.1_PRJEB7043	-	CECT 4255T
Lactobacillus kunkeei	148814	PRJNA270962	270962	Terrabacteria group	Firmicutes	1.52585	37.2	-	JXCW01	8	1435	1358	9/11/15	4/4/17	Scaffold	Uppsala university	SAMN03275714	GCA_001421115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/115/GCA_001421115.1_ASM142111v1	25953738	LAce
Peptococcaceae bacterium SCADC1_2_3	1487582	PRJNA243645	243645	Terrabacteria group	Firmicutes	1.70302	42.7	-	JPEC01	222	1546	1461	8/17/14	8/17/14	Contig	Hydrocarbon Metagenomic Project	SAMN02887155	GCA_000740865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/865/GCA_000740865.1_ASM74086v1	-	-
Pseudomonas moraviensis	321662	PRJNA397522	397522	Proteobacteria	Gammaproteobacteria	6.12458	60.3	-	NRST01	1	5602	5396	9/8/17	9/11/17	Contig	Yeungnam University	SAMN07550341	GCA_002287825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/825/GCA_002287825.1_ASM228782v1	-	TYU6
Sulfitobacter pontiacus	60137	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.27685	60.4	-	DFLR01	27	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454022	GCA_002375285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/285/GCA_002375285.1_ASM237528v1	28894102	-
Geobacillus thermocatenulatus	33938	PRJNA383645	383645	Terrabacteria group	Firmicutes	3.5638	51.8	-	NEWK01	2	3693	3350	7/13/17	7/15/17	Contig	University of Pretoria	SAMN06768585	GCA_002217655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/655/GCA_002217655.1_ASM221765v1	-	BGSC 93A1
Lactobacillus paralimentarius DSM 13238 = JCM 10415	1122151	PRJDB646	243225	Terrabacteria group	Firmicutes	2.52359	35.1	-	BAMH01	210	2488	2164	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00012331	GCA_000615725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/725/GCA_000615725.1_ASM61572v1	-	JCM 10415
Chlamydia suis MD56	1405296	PRJNA221336	221336	PVC group	Chlamydiae	1.07968	41.9718	plasmid pMD56:NZ_CM002267.1/CM002267.1	AYKJ01	13	980	892	10/31/13	4/2/17	Scaffold	Institute for Genome Sciences	SAMN02388129	GCA_000493885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/885/GCA_000493885.1_suis	24812227	MD56
Photobacterium phosphoreum	659	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.57977	39.5	-	LZFF01	86	4130	3818	6/24/16	4/13/17	Contig	FDA/CFSAN	SAMN04507565	GCA_001676195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/195/GCA_001676195.1_ASM167619v1	-	GCSL-P64
Mycobacterium vulneris	547163	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.99555	66.9	-	MBEG01	100	6744	6565	7/15/16	4/13/17	Contig	JCVI	SAMN04634260	GCA_001686835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/835/GCA_001686835.1_ASM168683v1	-	ICS2043
Lactobacillus gallinarum	52242	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.02009	36.4	-	NFKZ01	79	2064	1852	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473623	GCA_002160635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/635/GCA_002160635.1_ASM216063v1	-	An153
Porphyromonas cangingivalis	36874	PRJEB19555	376314	FCB group	Bacteroidetes/Chlorobi group	2.36814	47.6	-	FUWL01	34	2021	1916	3/4/17	3/10/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745205	GCA_900167355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/355/GCA_900167355.1_IMG-taxon_2585428082_annotated_assembly	-	ATCC 700135
Lysobacter capsici AZ78	1444315	PRJNA233588	233588	Proteobacteria	Gammaproteobacteria	6.27012	66.7	-	JAJA02	3	5082	4940	3/28/14	4/11/17	Contig	Fondazione Edmund Mach	SAMN02952970	GCA_000604005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/005/GCA_000604005.2_ASM60400v2	24762937	AZ78
Lysinibacillus sp. LK3	1628207	PRJNA277396	277396	Terrabacteria group	Firmicutes	4.53894	37.4	-	LDUJ01	59	4455	4317	6/30/15	4/10/17	Contig	University of Malaya	SAMN03390109	GCA_001043675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/675/GCA_001043675.1_ASM104367v1	-	LK3
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.73711	35.6	-	LZGN01	46	2481	2362	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179584	GCA_001690185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/185/GCA_001690185.1_ASM169018v1	-	wkB308
Candidatus Accumulibacter sp. SK-12	1454001	PRJNA236436	236436	Proteobacteria	Betaproteobacteria	4.41272	65.8	-	JFAX01	61	3943	3906	3/3/14	3/3/14	Contig	Australian Centre for Ecogenomics	SAMN02445085	GCA_000585015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/015/GCA_000585015.1_capsk12	-	-
Ensifer adhaerens	106592	PRJNA327181	327181	Proteobacteria	Alphaproteobacteria	6.93749	62.2	-	MAUG01	65	6492	6279	7/11/16	4/13/17	Contig	Nanjing Agricultural University	SAMN05323829	GCA_001683495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/495/GCA_001683495.1_ASM168349v1	-	M78
Streptococcus oralis subsp. dentisani	1458253	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.92917	41.1	-	NCVB01	22	1881	1780	4/18/17	4/21/17	Contig	Slagelse Hospital	SAMN06705607	GCA_002096695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/695/GCA_002096695.1_ASM209669v1	27325438	Y_052157_08
Lebetimonas sp. JS032	990070	PRJNA208428	208428	Proteobacteria	delta/epsilon subdivisions	1.70913	31.5	-	ATHS01	5	1861	1753	1/24/14	4/17/17	Contig	Marine Biological Lab	SAMN02203751	GCA_000523315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/315/GCA_000523315.1_LebetimonasJS032	24257443	JS032
Aphanizomenon flos-aquae MDT14a	1710895	PRJNA294801	294801	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.63259	37.1	-	LJOX01	193	4191	3936	6/20/16	6/20/16	Contig	Oregon State University	SAMN04028820	GCA_001672095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/095/GCA_001672095.1_ASM167209v1	-	-
Pseudomonas corrugata	47879	PRJNA290284	290284	Proteobacteria	Gammaproteobacteria	6.26658	60.3	-	LIHH01	431	5636	5336	10/23/15	4/4/17	Scaffold	Technological Educational Institute of Crete	SAMN03879928	GCA_001412065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/065/GCA_001412065.1_ASM141206v1	26300874	TEIC1148
Tenacibaculum sp. MAR_2009_124	1250059	PRJEB16389	349307	FCB group	Bacteroidetes/Chlorobi group	5.52449	32.4	-	FNSF01	8	4599	4451	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04489761	GCA_900105455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/455/GCA_900105455.1_IMG-taxon_2634166274_annotated_assembly	-	Mar_2009_124
Methanobrevibacter arboriphilus JCM 13429 = DSM 1125	1300164	PRJDB900	243777	Euryarchaeota	Methanobacteria	2.33148	25.4	-	BBET01	431	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016809	GCA_001316345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/345/GCA_001316345.1_ASM131634v1	-	JCM 13429
Escherichia coli	562	PRJNA324607	324607	Proteobacteria	Gammaproteobacteria	4.59558	50.8	chromosome:NZ_CP016018.1/CP016018.1	-	1	4730	4403	6/15/16	2/25/17	Complete Genome	University of Colroado Anschutz Medical Campus	SAMN05210771	GCA_001663075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/075/GCA_001663075.1_ASM166307v1	-	ER1821R
Bradyrhizobium yuanmingense CCBAU 35157	1128328	PRJNA77219	77219	Proteobacteria	Alphaproteobacteria	7.85413	63.9	-	AJQL01	457	7612	6906	5/3/12	5/18/17	Contig	China Agricultural University	SAMN02469469	GCA_000261825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/825/GCA_000261825.1_35157	22586130	CCBAU 35157
Bordetella trematum	123899	PRJEB2850	204590	Proteobacteria	Betaproteobacteria	4.35613	65.7	-	FKBT01	45	4028	3891	4/6/16	4/12/17	Scaffold	SC	SAMEA1982602	GCA_900078325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/325/GCA_900078325.1_7642_7_32	-	H064000408
Burkholderia lata	482957	PRJNA277405	277405	Proteobacteria	Betaproteobacteria	8.67269	66.5	-	LDWF01	185	8015	7599	6/24/15	4/10/17	Contig	University of Malaya	SAMN03744440	GCA_001038835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/835/GCA_001038835.1_ASM103883v1	-	LK13
Luteimonas sp. FCS-9	1547516	PRJNA280025	280025	Proteobacteria	Gammaproteobacteria	3.94517	71	-	LASZ01	55	3503	3360	5/28/15	4/10/17	Contig	Institute of Microbial Technology	SAMN03453604	GCA_001014645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/014/645/GCA_001014645.1_ASM101464v1	-	FCS-9
Candidatus Microthrix parvicella	41950	PRJNA348753	348753	Terrabacteria group	Actinobacteria	3.67076	66.7	-	DFWU01	131	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453212	GCA_002381065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/065/GCA_002381065.1_ASM238106v1	28894102	-
Staphylococcus cohnii subsp. cohnii	74704	PRJNA275680	275680	Terrabacteria group	Firmicutes	2.77647	32.3	-	LAKJ01	101	2741	2534	4/27/15	4/3/17	Contig	Institute of Microbial Technology	SAMN03352186	GCA_000981215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/215/GCA_000981215.1_ASM98121v1	-	G22B2
Aeromonas dhakensis	196024	PRJNA312130	312130	Proteobacteria	Gammaproteobacteria	4.75084	61.8	-	LZFM01	64	4333	4166	6/21/16	4/13/17	Contig	Syngene International Ltd	SAMN04494559	GCA_001673685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/685/GCA_001673685.1_ASM167368v1	-	F2S2-1
Kosakonia sacchari	1158459	PRJEB16854	351027	Proteobacteria	Gammaproteobacteria	5.53821	54.3	-	FOAY01	36	5352	5112	10/29/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487787	GCA_900109485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/485/GCA_900109485.1_IMG-taxon_2623620455_annotated_assembly	-	SP1
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854	1150460	PRJNA239848	239848	Terrabacteria group	Actinobacteria	2.30796	56.2	-	JGYY01	30	2024	1948	8/18/14	12/4/14	Contig	University of Parma	SAMN02673436	GCA_000741605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/605/GCA_000741605.1_Bifkas	"2,508,549,325,107,960"	DSM 21854
Candidatus Synechococcus spongiarum 15L	1608419	PRJNA274222	274222	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.2091	59.1	-	JYFQ01	229	2139	1878	5/14/15	7/8/15	Contig	University of Wuerzburg	SAMN03323802	GCA_001007635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/635/GCA_001007635.1_ASM100763v1	26037118	-
Porphyromonas crevioricanis	393921	PRJNA253615	253615	FCB group	Bacteroidetes/Chlorobi group	2.10529	45.4	-	JQJB01	14	1851	1753	10/27/14	4/9/17	Contig	UC Davis	SAMN03004341	GCA_000768955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/955/GCA_000768955.1_ASM76895v1	25858832	COT-253 OH2125
Salinivibrio sp. PR919	1909491	PRJNA368804	368804	Proteobacteria	Gammaproteobacteria	3.48965	49.9	-	MUFL01	176	3292	3076	2/14/17	4/17/17	Contig	Universidad de Sevilla	SAMN06273023	GCA_001995355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/355/GCA_001995355.1_ASM199535v1	-	PR919
Legionella oakridgensis	29423	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	2.66821	40.8	-	LNYP01	31	2513	2414	12/15/15	4/11/17	Scaffold	Tel Aviv University	SAMN04274787	GCA_001467925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/925/GCA_001467925.1_ASM146792v1	26752266	Oak Ridge-10
Methylibium sp. T29-B	1437443	PRJNA231927	231927	Proteobacteria	Betaproteobacteria	4.4304	68.9	-	AZSN01	409	4445	3439	2/20/14	4/9/17	Contig	MiOxyFun	SAMN02462923	GCA_000576225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/225/GCA_000576225.1_T29-B	-	T29-B
Williamsia sp. 1138	1903117	PRJNA343346	343346	Terrabacteria group	Actinobacteria	6.08094	64.8	-	MJEJ02	54	5658	5491	4/18/17	8/21/17	Scaffold	University of Tasmania	SAMN05786344	GCA_002095435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/435/GCA_002095435.2_ASM209543v2	-	1138
Streptomyces niveus	193462	PRJNA293375	293375	Terrabacteria group	Actinobacteria	8.13926	70.6	-	MDCS01	1229	7745	6686	9/11/16	3/13/17	Scaffold	USDA/ARS/NCAUR	SAMN05557884	GCA_001723075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/075/GCA_001723075.1_ASM172307v1	-	NRRL 2449
Shigella sp. PAMC 28760	1813821	PRJNA315032	315032	Proteobacteria	Gammaproteobacteria	4.55829	50.8	chromosome:NZ_CP014768.1/CP014768.1	-	1	4700	4335	3/22/16	2/25/17	Complete Genome	Korea Polar Research Institute	SAMN04548868	GCA_001596115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/115/GCA_001596115.1_ASM159611v1	-	PAMC 28760
Asticcacaulis sp. YBE204	1282363	PRJNA186533	186533	Proteobacteria	Alphaproteobacteria	4.15743	60.7	-	AWGF01	59	3836	3730	11/6/13	4/9/17	Contig	Indiana University	SAMN02469916	GCA_000495855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/855/GCA_000495855.1_AspACYBE204.1.0	24463524	YBE204
Smithella sp. D17	1538639	PRJNA259152	259152	Proteobacteria	delta/epsilon subdivisions	1.63556	43.2	-	JQOA01	271	1402	1343	9/10/14	10/9/14	Contig	Hydrocarbon Metagenomic Project	SAMN03002178	GCA_000753945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/945/GCA_000753945.1_ASM75394v1	25342693	-
Bacillus toyonensis	155322	PRJNA397090	397090	Terrabacteria group	Firmicutes	5.90806	35.3	-	NRSQ01	7	6305	5828	9/8/17	9/11/17	Contig	Yeungnam University	SAMN07448224	GCA_002287765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/765/GCA_002287765.1_ASM228776v1	-	TYU3
Kandleria vitulina DSM 20405	1410657	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.14343	35.1	-	JQBL01	138	2138	2052	11/6/15	4/10/17	Scaffold	Shanghai Majorbio	SAMN02797780	GCA_001436965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/965/GCA_001436965.1_ASM143696v1	26415554	DSM 20405
Pseudobutyrivibrio sp. UC1225	1798185	PRJEB17131	351317	Terrabacteria group	Firmicutes	3.37187	38.8	-	FOVQ01	32	3080	2965	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487831	GCA_900115215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/215/GCA_900115215.1_IMG-taxon_2606217737_annotated_assembly	-	UC1225
Franconibacter helveticus	357240	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.62289	56.3	-	JVIC01	85	4344	4182	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197604	GCA_001063355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/355/GCA_001063355.1_ASM106335v1	26230489	413_SENT
Streptomyces lydicus	47763	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.18144	72.1	-	JNZA01	131	7317	6967	7/1/14	3/9/17	Contig	University of Illinois	SAMN02645328	GCA_000717345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/345/GCA_000717345.1_ASM71734v1	-	NRRL ISP-5461
Yersinia similis	367190	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	5.00403	47	-	CHJS01	168	4683	4276	4/21/15	4/11/17	Scaffold	SC	SAMEA859915	GCA_001319745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/745/GCA_001319745.1_5139_1_5	-	Y252
Pseudomonas mosselii	78327	PRJNA323933	323933	Proteobacteria	Gammaproteobacteria	5.8123	64.2	-	LZCV01	101	5368	5194	8/23/16	4/13/17	Contig	U.S. Department of Agriculture	SAMN05192121	GCA_001709215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/215/GCA_001709215.1_ASM170921v1	-	Gil3
Franconibacter pulveris	435910	PRJNA284217	284217	Proteobacteria	Gammaproteobacteria	4.8561	56.7	-	LFEJ01	30	4596	4398	7/14/15	4/10/17	Contig	National Institute of Technology Durgapur	SAMN03733603	GCA_001077855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/855/GCA_001077855.1_ASM107785v1	-	DJ34
Pantoea dispersa	59814	PRJNA278251	278251	Proteobacteria	Gammaproteobacteria	4.84387	57.6	-	LDRY01	35	4488	4350	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401416	GCA_001476715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/715/GCA_001476715.1_ASM147671v1	26793183	NS215
Virgibacillus sp. CM-4	1354277	PRJNA210731	210731	Terrabacteria group	Firmicutes	4.18218	37.1	-	AUQA01	20	4116	3964	8/13/13	4/8/17	Contig	The University of Hong Kong	SAMN02471178	GCA_000445495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/495/GCA_000445495.1_Version_1_of_the_Virgibacillus_hongkongensis_CM-4_genome	-	CM-4
Desulfococcus multivorans DSM 2059	1121405	PRJEB19543	376322	Proteobacteria	delta/epsilon subdivisions	4.3845	56.9	-	FUWN01	54	3899	3756	3/4/17	3/10/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745446	GCA_900167235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/235/GCA_900167235.1_IMG-taxon_2568526001_annotated_assembly	-	DSM 2059
Escherichia coli str. K-12 substr. MG1655	511145	PRJNA306781	306781	Proteobacteria	Gammaproteobacteria	4.65754	50.8	chromosome:NZ_CP014348.1/CP014348.1	-	1	4817	4482	2/23/16	2/25/17	Complete Genome	University of Idaho	SAMN04393382	GCA_001566335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/335/GCA_001566335.1_ASM156633v1	-	JW5437-1 substr. MG1655
Olleya sp. UBA1516	1947013	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.33624	31.8	-	DCQO01	23	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452628	GCA_002323495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/495/GCA_002323495.1_ASM232349v1	28894102	-
Rhizobium pusense	648995	PRJEB15811	347768	Proteobacteria	Alphaproteobacteria	5.28362	59.2	-	FNBB01	28	5152	4962	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421750	GCA_900102105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/105/GCA_900102105.1_IMG-taxon_2671180227_annotated_assembly	-	LMG 25623
Cellulophaga baltica 13	1348583	PRJNA209291	209291	FCB group	Bacteroidetes/Chlorobi group	4.48648	34.6	-	ATLH01	41	3950	3832	9/18/13	4/9/17	Contig	University of Arizona	SAMN02208948	GCA_000468595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/595/GCA_000468595.1_Cbal13_1.0	24428166	13
Escherichia coli B	37762	PRJNA309539	309539	Proteobacteria	Gammaproteobacteria	4.47896	50.8	chromosome:NZ_CP014268.2/CP014268.2	-	1	4622	4258	2/11/16	2/25/17	Complete Genome	New England Biolabs	SAMN04435507	GCA_001559615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/615/GCA_001559615.2_ASM155961v2	-	C2566
Odoribacter sp. UNK.MGS-12	1638778	PRJNA277012	277012	FCB group	Bacteroidetes/Chlorobi group	5.87234	43.5	-	LBCD01	253	-	-	4/24/15	6/10/15	Scaffold	The Mayo Clinic	SAMN03456680	GCA_000980585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/585/GCA_000980585.1_ASM98058v1	26021920	-
Chthonomonas calidirosea	454171	PRJEB4937	300971	Terrabacteria group	Armatimonadetes	3.43786	54.6	-	CDLG01	1	2918	2840	11/3/15	4/11/17	Scaffold	GNS	SAMEA2248200	GCA_001458035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/035/GCA_001458035.1_TKA4.10	-	TKA4.10
Acetobacter sp. DsW_059	1670661	PRJNA253128	253128	Proteobacteria	Alphaproteobacteria	2.70018	50.6	-	JOPI01	179	2478	2355	5/19/17	5/24/17	Contig	Cornell University	SAMN02866237	GCA_002153695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/695/GCA_002153695.1_ASM215369v1	-	DsW_059
Clostridium autoethanogenum	84023	PRJNA280340	280340	Terrabacteria group	Firmicutes	4.32202	30.9	-	LITR01	31	4041	3849	6/9/17	6/12/17	Scaffold	Cornell University	SAMN03459582	GCA_002189005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/005/GCA_002189005.1_ASM218900v1	26331212	JA1-1
Clostridium paraputrificum	29363	PRJNA320951	320951	Terrabacteria group	Firmicutes	3.4886	29.7	-	MAPZ01	41	3359	3226	7/5/16	4/13/17	Contig	Gut Microbiota and Clostridia Research Group	SAMN04961143	GCA_001679805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/805/GCA_001679805.1_ASM167980v1	-	373-A1
Sutterella sp. CAG:351	1262975	PRJEB844	206939	Proteobacteria	Betaproteobacteria	2.38805	56.9	-	CBJA01	172	2249	2202	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138796	GCA_000438235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/235/GCA_000438235.1_MGS351	-	-
Dialister sp. UBA734	1946420	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.61081	46.2	-	DBLC01	180	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453418	GCA_002297935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/935/GCA_002297935.1_ASM229793v1	28894102	-
Methanoculleus sp. SDB	1735326	PRJNA293354	293354	Euryarchaeota	Methanomicrobia	2.08572	56.6	-	LKUD01	109	2183	2051	10/26/15	10/26/15	Contig	University of Oklahoma	SAMN04125645	GCA_001412355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/355/GCA_001412355.1_ASM141235v1	-	-
Roseburia sp. CAG:380	1262946	PRJEB859	206731	Terrabacteria group	Firmicutes	2.85574	46.3	-	CBGD01	123	2517	2486	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138525	GCA_000432755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/755/GCA_000432755.1_MGS380	-	-
Burkholderia contaminans	488447	PRJNA203156	203156	Proteobacteria	Betaproteobacteria	8.36923	66.3	-	MDUI01	239	7826	7311	9/2/16	4/13/17	Contig	University of Manitoba	SAMN05605435	GCA_001720405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/405/GCA_001720405.1_ASM172040v1	-	FFI-28
Bifidobacterium thermacidophilum subsp. thermacidophilum DSM 15837	1121111	PRJNA237576	237576	Terrabacteria group	Actinobacteria	2.22099	60.4	-	JDTO01	40	1739	1634	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442006	GCA_000771005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/005/GCA_000771005.1_DSM-15837	25658111	DSM 15837
Vibrio owensii	696485	PRJNA297683	297683	Proteobacteria	Gammaproteobacteria	6.14136	45.6	-	LKMC01	147	5678	5459	10/13/15	4/4/17	Scaffold	ShangHai Ocean University	SAMN04128477	GCA_001310575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/575/GCA_001310575.1_ASM131057v1	-	SH14
Serratia fonticola LMG 7882	1378072	PRJNA213314	213314	Proteobacteria	Gammaproteobacteria	5.89586	53.6	-	AVAH01	363	5535	5041	9/18/13	4/2/17	Contig	Rede Paraense de genômica e proteômica	SAMN02471347	GCA_000469035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/035/GCA_000469035.1_sf7882_v1	24265499	LMG 7882
Faecalibacterium sp. An77	1965655	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.05139	59.6	-	NFHK01	124	2848	2692	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473756	GCA_002161315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/315/GCA_002161315.1_ASM216131v1	-	An77
Microbispora sp. NBRC 110460	1566628	PRJDB3264	266393	Terrabacteria group	Actinobacteria	0.304005	70	-	BBOZ01	1	295	284	11/12/14	4/9/17	Contig	National Institute of Technology and Evaluation Biological Resource Center	SAMD00022570	GCA_000784475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/475/GCA_000784475.1_ASM78447v1	-	NBRC 110460
Bordetella hinzii ATCC 51730	1392838	PRJNA217369	217369	Proteobacteria	Betaproteobacteria	4.896	67.1	-	AWNM01	98	4650	4480	9/26/13	4/2/17	Contig	University of British Columbia	SAMN02335432	GCA_000471685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/685/GCA_000471685.1_Bhinzii1.0	24158552	ATCC 51730
Dyella japonica DSM 16301	1440762	PRJNA232368	232368	Proteobacteria	Gammaproteobacteria	4.23771	64.1	-	JPLA01	217	3720	3590	5/19/15	4/10/17	Contig	McMaster University	SAMN02894429	GCA_001010355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/355/GCA_001010355.1_ASM101035v1	25481407	DSM 16301
Helicobacter sp. CLO-3	211	PRJNA338014	338014	Proteobacteria	delta/epsilon subdivisions	2.25555	45.2	-	MLQN01	87	2017	1909	10/26/16	4/13/17	Contig	UW	SAMN05912802	GCA_001854545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/545/GCA_001854545.1_ASM185454v1	-	CLO-3
Maritimibacter sp. UBA3975	1946833	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	4.10446	64.6	-	DGCP01	19	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452011	GCA_002384975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/975/GCA_002384975.1_ASM238497v1	28894102	-
Variovorax boronicumulans	436515	PRJNA297065	297065	Proteobacteria	Betaproteobacteria	6.76826	68.4	-	LKDZ01	75	6245	6092	10/7/16	4/13/17	Contig	Nagaoka University of Technology	SAMN04114355	GCA_001753775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/775/GCA_001753775.1_ASM175377v1	-	PHE5-4
Butyricicoccus sp. N15.MGS-46	1828555	PRJNA312222	312222	Terrabacteria group	Firmicutes	1.60454	55	-	LWLI01	13	-	-	5/13/16	5/13/16	Scaffold	Mayo Clinic	SAMN04859491	GCA_001643455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/455/GCA_001643455.1_ASM164345v1	-	-
Stappia sp. P2PMeth1	2003586	PRJEB20986	395447	Proteobacteria	Alphaproteobacteria	5.49392	67.1	-	FYAW01	61	-	-	7/22/17	7/22/17	Contig	Griffith University	SAMEA104113276	GCA_900185735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/735/GCA_900185735.1_P2PMeth1_Assembly_1	-	-
Phaeobacter sp. CECT 5382	1712645	PRJEB10673	299785	Proteobacteria	Alphaproteobacteria	4.11294	58	-	CYSG01	56	3883	3750	10/26/15	4/11/17	Contig	UVEG	SAMEA3535146	GCA_001457775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/775/GCA_001457775.1_Phaeobacter_sp._CECT5382_Spades_Prokka	-	CECT 5382
Plesiomonas shigelloides	703	PRJNA270150	270150	Proteobacteria	Gammaproteobacteria	3.91623	51.6	-	JWHQ01	83	3508	3349	1/2/15	4/10/17	Contig	University of Malaya	SAMN03263584	GCA_000813415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/415/GCA_000813415.1_ASM81341v1	-	GN7
Sporosarcina sp. D27	1382305	PRJNA214315	214315	Terrabacteria group	Firmicutes	3.63387	41.6	-	AZUC01	65	3583	3467	3/10/14	4/9/17	Contig	"Department of Life Science, National Taitung University"	SAMN02302522	GCA_000586555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/555/GCA_000586555.1_SspNovD27	-	D27
Bacillus flexus	86664	PRJNA287868	287868	Terrabacteria group	Firmicutes	5.66913	37.7	-	LFQJ01	194	5768	5534	8/5/15	4/10/17	Contig	University of Malaya	SAMN03793180	GCA_001238505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/505/GCA_001238505.1_ASM123850v1	-	Riq5
Nitrosospira sp. Nsp13	1855332	PRJEB15791	347710	Proteobacteria	Betaproteobacteria	3.62116	52.8	-	FMVD01	48	3245	3096	10/17/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216308	GCA_900101945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/945/GCA_900101945.1_IMG-taxon_2671180075_annotated_assembly	-	Nsp13
Pseudomonas veronii	76761	PRJNA274345	274345	Proteobacteria	Gammaproteobacteria	6.99787	60.7	-	JYLL01	95	6406	6147	11/6/15	4/11/17	Contig	"Zentralinstitut fuer Ernaehrungs- und Lebensmittelforschung (ZIEL), WZW, TUM"	SAMN03328800	GCA_001439695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/695/GCA_001439695.1_G8123	-	DSM 11331
Bifidobacterium thermophilum DSM 20210	1437596	PRJNA237576	237576	Terrabacteria group	Actinobacteria	2.22484	59.7	-	JDUB01	48	1714	1622	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442019	GCA_000771265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/265/GCA_000771265.1_DSM-20210	25658111	DSM 20210
Comamonas sp. SCN 67-35	1660096	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	3.35919	66.6	-	MEFV01	38	3132	3037	9/13/16	9/13/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03652498	GCA_001725255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/255/GCA_001725255.1_ASM172525v1	26031303	-
Gluconobacter thailandicus	257438	PRJNA288385	288385	Proteobacteria	Alphaproteobacteria	3.67773	56.3	-	LHZM01	90	3391	3215	3/7/16	4/12/17	Contig	Ghent University	SAMN03799283	GCA_001580835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/835/GCA_001580835.1_ASM158083v1	-	LMG 1741
Mycobacterium yongonense	1203599	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.84219	67.9	-	MBDZ01	326	5678	5264	7/15/16	4/13/17	Contig	JCVI	SAMN04634227	GCA_001686645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/645/GCA_001686645.1_ASM168664v1	-	E3170
Pseudomonas denitrificans (nomen rejiciendum)	43306	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.95426	65.9	-	JWBF01	535	6777	6348	7/10/15	5/30/17	Scaffold	University of Washington	SAMN03197107	GCA_001060395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/395/GCA_001060395.1_ASM106039v1	26230489	1151_PDEN
Borrelia miyamotoi FR64b	1292392	PRJNA189055	189055	Spirochaetes	Spirochaetia	1.37999	28.6934	chromosome:NZ_CP004217.2/CP004217.2	-	50	1386	1172	1/27/14	4/18/17	Chromosome	"Rocky Mountain Labs, NIAID, NIH"	SAMN03081452	GCA_000568695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/695/GCA_000568695.2_ASM56869v2	-	FR64b
Desulfobulbus sp. oral taxon 041 str. Dsb1-5	1292046	PRJNA188735	188735	Proteobacteria	delta/epsilon subdivisions	1.87613	58.8	-	APCF01	384	-	-	5/31/13	7/29/15	Contig	Oak Ridge National Laboratory	SAMN02470741	GCA_000403865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/865/GCA_000403865.1_Dsb1-5	23555659	Dsb1-5
Kocuria sp. ZOR0020	1339234	PRJNA205578	205578	Terrabacteria group	Actinobacteria	3.01309	63.8	-	JROX01	469	2782	2495	12/11/14	4/9/17	Contig	University of Oregon	SAMN03021531	GCA_000800955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/955/GCA_000800955.1_ZOR0020.1	-	ZOR0020
Treponema pedis isoM1220	1291002	PRJNA188678	188678	Spirochaetes	Spirochaetia	3.10134	37.3	-	AOTQ01	761	2858	2442	9/6/13	4/2/17	Contig	Swedish University of Agricultural Sciences	SAMN02379488	GCA_000465055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/055/GCA_000465055.1_Treponema_pedis_isoM1220	23977007	isoM1220
Rathayibacter toxicus	145458	PRJNA257008	257008	Terrabacteria group	Actinobacteria	2.32224	61.6	-	LBFI01	61	2128	2039	5/1/15	4/10/17	Contig	µFORGE	SAMN03418623	GCA_000986985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/986/985/GCA_000986985.1_RTOX002-SEQ-2-ASM-1	-	FH142
Halorubrum ezzemoulense	337243	PRJNA232799	232799	Euryarchaeota	Halobacteria	2.1124	69.3	-	NHPC01	28	2123	1934	8/15/17	8/15/17	Contig	University of Conn.	SAMN02716042	GCA_002252865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/865/GCA_002252865.1_ASM225286v1	24782836	Fb21
Aerococcus urinaeequi	51665	PRJNA339485	339485	Terrabacteria group	Firmicutes	2.22764	39.1	-	MDRY01	94	2070	1952	9/6/16	4/13/17	Contig	Nanjing University	SAMN05591982	GCA_001719605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/605/GCA_001719605.1_ASM171960v1	-	AV208
Pseudomonas poae	200451	PRJNA274345	274345	Proteobacteria	Gammaproteobacteria	5.88389	60.5	-	JYLI01	56	5387	5144	11/6/15	4/11/17	Contig	"Zentralinstitut fuer Ernaehrungs- und Lebensmittelforschung (ZIEL), WZW, TUM"	SAMN03328795	GCA_001439785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/785/GCA_001439785.1_G8687	-	DSM 14936
Sphingopyxis sp. Root1497	1736474	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	4.80118	65.8	-	LMGF01	7	4526	4416	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155743	GCA_001427085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/085/GCA_001427085.1_Root1497	26633631	Root1497
Leifsonia sp. 509MF	1798219	PRJEB16236	348974	Terrabacteria group	Actinobacteria	4.14149	69.8	chromosome I:NZ_LT629707.1/LT629707.1	-	1	3979	3906	10/20/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04515686	GCA_900103945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/945/GCA_900103945.1_IMG-taxon_2639763200_annotated_assembly	-	509MF
Brachyspira hampsonii	1287055	PRJNA324559	324559	Spirochaetes	Spirochaetia	3.16127	27.4	-	LZOF01	77	2821	2696	9/25/16	4/13/17	Contig	University of Minnesota	SAMN05209828	GCA_001746225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/225/GCA_001746225.1_ASM174622v1	-	NSH-16
Magnetospirillum sp. 64-120	1895778	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	4.27353	64	-	MKVK01	58	4105	4009	12/9/16	12/9/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN05660605	GCA_001898825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/825/GCA_001898825.1_ASM189882v1	-	-
Escherichia coli B	37762	PRJNA309540	309540	Proteobacteria	Gammaproteobacteria	4.56919	50.8	chromosome:NZ_CP014269.1/CP014269.1	-	1	4774	4383	2/11/16	2/25/17	Complete Genome	New England Biolabs	SAMN04435508	GCA_001559635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/635/GCA_001559635.1_ASM155963v1	-	C3029
Streptomyces lavendulae subsp. lavendulae	58340	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.94801	72	-	JOCN01	140	7883	7500	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645420	GCA_000718855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/855/GCA_000718855.1_ASM71885v1	-	NRRL WC-3532
Paracoccus pantotrophus	82367	PRJEB17911	353818	Proteobacteria	Alphaproteobacteria	5.43108	67.8	-	FPKI01	109	5393	5049	11/17/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04244548	GCA_900119475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/475/GCA_900119475.1_IMG-taxon_2597490334_annotated_assembly	-	DSM 1403
Escherichia coli str. K-12 substr. MG1655	511145	PRJNA308372	308372	Proteobacteria	Gammaproteobacteria	4.65963	50.8	chromosome:NZ_CP014225.1/CP014225.1	-	1	4807	4481	2/2/16	2/25/17	Complete Genome	Weill Cornell Medical College	SAMN04403366	GCA_001544635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/635/GCA_001544635.1_ASM154463v1	26802429	K-12 substr. MG1655
Staphylococcus pasteuri	45972	PRJNA375758	375758	Terrabacteria group	Firmicutes	2.73108	34.1	-	NCXJ01	604	2579	2454	8/29/17	8/30/17	Contig	SysMilk	SAMN06718495	GCA_002276895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/895/GCA_002276895.1_ASM227689v1	-	KR
Brevibacillus borstelensis	45462	PRJNA348753	348753	Terrabacteria group	Firmicutes	4.45306	52.1	-	DFNA01	87	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455814	GCA_002376405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/405/GCA_002376405.1_ASM237640v1	28894102	-
Micrococcus sp. FDAARGOS_333	1930558	PRJNA231221	231221	Terrabacteria group	Actinobacteria	2.8374	71.1	-	NJFJ01	1	2521	2345	6/23/17	6/26/17	Contig	US Food and Drug Administration 	SAMN06173346	GCA_002206575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/575/GCA_002206575.1_ASM220657v1	-	FDAARGOS_333
Streptomyces albulus PD-1	1395572	PRJNA217850	217850	Terrabacteria group	Actinobacteria	9.42704	72.3	-	AXDB02	244	8316	7816	12/5/13	3/9/17	Contig	"State Key Laboratory of Materials-Oriented Chemical Engineering, College of Food Science and Light Industry, Nanjing University of Technology"	SAMN02470570	GCA_000504065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/065/GCA_000504065.2_Velvet_for_version_02_of_Streptomyces_albulus_PD-1	24744334	PD-1
Haloarcula sp. K1	1622207	PRJNA308270	308270	Euryarchaeota	Halobacteria	4.3318	61.7	-	LRHL01	46	4283	4131	4/30/16	3/29/17	Scaffold	Institute of Microbial Technology	SAMN04390187	GCA_001647155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/155/GCA_001647155.1_ASM164715v1	-	K1
Lysobacter antibioticus	84531	PRJNA247708	247708	Proteobacteria	Gammaproteobacteria	5.52731	67.1	-	JMTZ01	168	4521	4374	7/18/14	4/9/17	Contig	Key Laboratory of Agricultural Biodiversity for Plant Disease Management under the Ministry of Education	SAMN02777950	GCA_000731095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/095/GCA_000731095.1_ASM73109v1	25301638	13-6
Lysobacter sp. Root667	1736581	PRJNA297942	297942	Proteobacteria	Gammaproteobacteria	4.44653	68.3	-	LMHF01	16	4009	3867	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155850	GCA_001427715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/715/GCA_001427715.1_Root667	26633631	Root667
Ensifer sp. Root31	1736512	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	8.06965	61	-	LMCO01	67	7759	7322	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155781	GCA_001424825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/825/GCA_001424825.1_Root31	26633631	Root31
Pannonibacter phragmitetus	121719	PRJNA290328	290328	Proteobacteria	Alphaproteobacteria	5.58335	63.6	-	LGSQ01	40	5099	4964	7/29/15	4/10/17	Contig	Tianjin University	SAMN03890376	GCA_001188555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/555/GCA_001188555.1_ASM118855v1	26823598	CGMCC9175
Blautia wexlerae DSM 19850	1121115	PRJNA195783	195783	Terrabacteria group	Firmicutes	4.50847	41.4	-	AXVN01	210	4296	3983	10/25/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440722	GCA_000484655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/655/GCA_000484655.1_ASM48465v1	-	DSM 19850
Pseudobutyrivibrio ruminis	46206	PRJEB16865	351017	Terrabacteria group	Firmicutes	2.76427	39	-	FNZX01	26	2581	2488	10/29/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910377	GCA_900109715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/715/GCA_900109715.1_IMG-taxon_2595698239_annotated_assembly	-	ACV-9
Bifidobacterium pseudolongum subsp. globosum DSM 20092	1410605	PRJNA223493	223493	Terrabacteria group	Actinobacteria	1.91305	63.4	-	JHWN01	40	1623	1504	4/8/14	4/2/17	Contig	DOE Joint Genome Institute	SAMN02743881	GCA_000687595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/595/GCA_000687595.1_ASM68759v1	-	DSM 20092
Butyrivibrio sp. FC2001	1280671	PRJNA185694	185694	Terrabacteria group	Firmicutes	4.57558	41.7	-	AUJH01	39	4082	3940	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440832	GCA_000424125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/125/GCA_000424125.1_ASM42412v1	-	FC2001
Butyrivibrio hungatei DSM 14810	1121132	PRJEB18445	356025	Terrabacteria group	Firmicutes	3.39495	39.9	-	FRDH01	22	3090	3001	12/3/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745247	GCA_900143205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/205/GCA_900143205.1_IMG-taxon_2582580726_annotated_assembly	-	DSM 14810
Lachnobacterium bovis	140626	PRJNA239496	239496	Terrabacteria group	Firmicutes	2.84445	31.3	-	JHWB01	22	2630	2375	4/8/14	4/10/17	Contig	DOE Joint Genome Institute	SAMN02743877	GCA_000687515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/515/GCA_000687515.1_ASM68751v1	-	AE2004
Alloscardovia omnicolens	419015	PRJNA267549	267549	Terrabacteria group	Actinobacteria	1.72502	46.8	-	JWFH01	54	1482	1387	7/10/15	4/3/17	Contig	University of Washington	SAMN03197001	GCA_001053655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/655/GCA_001053655.1_ASM105365v1	26230489	1036_GVAG
Streptomyces rimosus subsp. rimosus	132474	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.41561	72	-	JNYK01	134	7399	7050	7/1/14	3/9/17	Contig	University of Illinois	SAMN02645311	GCA_000716745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/745/GCA_000716745.1_ASM71674v1	-	NRRL B-8076
Curtobacterium sp. S6	1479623	PRJNA242794	242794	Terrabacteria group	Actinobacteria	2.75402	65.1	-	JHEL01	12	2457	2384	6/19/14	4/11/17	Scaffold	Universita di Verona	SAMN02709057	GCA_000710345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/345/GCA_000710345.2_CURSPS6	25035321	S6
Rhodococcus qingshengii	334542	PRJNA306614	306614	Terrabacteria group	Actinobacteria	7.26118	62.4	-	LRRJ01	131	6820	6574	5/18/16	4/12/17	Contig	Northumbria University	SAMN04357315	GCA_001646745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/646/745/GCA_001646745.1_ASM164674v1	-	JCM 15477
Weissella ceti NC36	1238674	PRJNA176505	176505	Terrabacteria group	Firmicutes	1.35264	40.8	-	ANCA01	7	1345	1256	12/13/12	4/8/17	Contig	USAMRIID	SAMN02472059	GCA_000320345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/320/345/GCA_000320345.1_ASM32034v1	23409274	NC36
Corynebacterium stationis	1705	PRJNA326997	326997	Terrabacteria group	Actinobacteria	2.84718	54.8	chromosome:NZ_CP016326.1/CP016326.1	-	1	2661	2489	7/5/17	7/7/17	Chromosome	Shanghai Institutes for Biological Sciences (SIBS) of Chinese Academy of Sciences (CAS)	SAMN05300205	GCA_002214685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/685/GCA_002214685.1_ASM221468v1	-	ATCC 21170
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.79116	58.8	-	LNWA01	71	4596	4448	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339837	GCA_001681235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/235/GCA_001681235.1_ASM168123v1	-	F2158
Pseudomonas lundensis	86185	PRJNA397499	397499	Proteobacteria	Gammaproteobacteria	4.80049	57.7	-	NQKI01	111	4517	4314	8/24/17	8/27/17	Contig	CSIRO Agriculture and Food	SAMN07459814	GCA_002269125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/125/GCA_002269125.1_ASM226912v1	-	L1802
Stenotrophomonas rhizophila	216778	PRJEB15263	350633	Proteobacteria	Gammaproteobacteria	4.2169	66.8	-	FMIT01	36	3774	3668	10/26/16	7/29/17	Contig	"UNIVERSITY OF COPENHAGEN, DEPARTMENT OF BIOLOGY"	SAMEA4402498	GCA_900095765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/765/GCA_900095765.1_ASM90009576v1	-	-
Brochothrix thermosphacta	2756	PRJNA338887	338887	Terrabacteria group	Firmicutes	2.5754	36.3	-	MDLL01	61	2464	2363	8/29/16	4/5/17	Contig	CSIRO Agriculture and Food; Food Safety and Stability Group	SAMN05567449	GCA_001715645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/645/GCA_001715645.1_ASM171564v1	-	Bth-7803
Leucobacter sp. 4J7B1	861268	PRJEB8447	279065	Terrabacteria group	Actinobacteria	3.25465	67.4	-	CDWJ01	432	2901	2795	3/21/15	8/1/17	Contig	University of Granada	SAMEA3249416	GCA_001373475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/475/GCA_001373475.1_Leucobacter_sp._4J7B1	-	4J7B1
Escherichia coli	562	PRJNA303642	303642	Proteobacteria	Gammaproteobacteria	4.57907	50.8	chromosome:NZ_CP013253.1/CP013253.1	-	1	4718	4222	12/2/15	2/25/17	Complete Genome	Third Military Medical University	SAMN04288058	GCA_001455385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/385/GCA_001455385.1_ASM145538v1	-	CQSW20
Serratia liquefaciens FK01	1460083	PRJDB1632	248732	Proteobacteria	Gammaproteobacteria	5.28011	55.7	-	BAZB01	28	4954	4800	5/27/14	4/9/17	Scaffold	Kyushu University	SAMD00016897	GCA_000699165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/165/GCA_000699165.1_ASM69916v1	24970828	FK01
Hafnia paralvei	546367	PRJNA397827	397827	Proteobacteria	Gammaproteobacteria	4.93867	48.1	-	NQMS01	65	4650	4425	9/7/17	9/9/17	Contig	Cork Institute of Technology	SAMN07488722	GCA_002287565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/565/GCA_002287565.1_ASM228756v1	-	CITHA-6
Mycoplasma sp. CAG:956	1262908	PRJEB1041	206707	Terrabacteria group	Tenericutes	1.44227	27.1	-	CAZA01	44	1398	1369	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138561	GCA_000433475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/475/GCA_000433475.1_MGS956	-	-
Acinetobacter guillouiae MSP4-18	1330038	PRJNA201034	201034	Proteobacteria	Gammaproteobacteria	4.84896	38.1	-	ASQG01	94	4642	4486	6/24/13	4/6/17	Contig	Institute of Microbial Technology	SAMN02469989	GCA_000414055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/055/GCA_000414055.1_Acinetobacter_guillouiae	-	MSP4-18
Salinivibrio costicola subsp. costicola ATCC 33508 = LMG 11651	1269942	PRJNA183873	183873	Proteobacteria	Gammaproteobacteria	4.78167	49.1	-	ASAI01	86	-	-	5/10/13	1/8/14	Contig	Smithsonian Institution	SAMN02470998	GCA_000390145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/145/GCA_000390145.1_Whole_genome_shotgun_assembly	-	ATCC 33508
Acinetobacter gyllenbergii MTCC 11365	1330039	PRJNA201036	201036	Proteobacteria	Gammaproteobacteria	4.31899	41	-	ASQH01	48	4184	4032	6/24/13	4/6/17	Contig	Institute of Microbial Technology	SAMN02469997	GCA_000414075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/075/GCA_000414075.1_Acinetobacter_gyllenbergii	-	MTCC 11365
Acinetobacter indicus	756892	PRJNA277265	277265	Proteobacteria	Gammaproteobacteria	3.01571	45.7	-	JZRF01	129	2934	2734	3/27/15	4/6/17	Contig	University of Malaya	SAMN03389077	GCA_000964095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/095/GCA_000964095.1_ASM96409v1	-	KM7
Acinetobacter brisouii	396323	PRJNA277267	277267	Proteobacteria	Gammaproteobacteria	2.99562	41.8	-	JZRE01	65	2849	2733	3/27/15	4/6/17	Contig	University of Malaya	SAMN03389080	GCA_000964015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/015/GCA_000964015.1_ASM96401v1	-	SM1
Acinetobacter soli TCM341	1451233	PRJNA231561	231561	Proteobacteria	Gammaproteobacteria	3.49815	42.7	-	JAPY01	74	3303	3155	4/17/14	4/6/17	Contig	The First Affiliated Hospital of Zhejiang Chinese Medical University	SAMN02443713	GCA_000633005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/005/GCA_000633005.1_AciSoi1.0	25320449	TCM341
Acinetobacter towneri	202956	PRJNA345289	345289	Proteobacteria	Gammaproteobacteria	2.95145	40.9	-	MKQS01	67	2918	2569	10/12/16	4/6/17	Contig	CHU A Coruna	SAMN05860603	GCA_001758345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/345/GCA_001758345.1_ASM175834v1	27932646	5-2Ac02
Streptococcus oralis subsp. tigurinus	1077464	PRJNA280661	280661	Terrabacteria group	Firmicutes	1.88577	41.1	-	LAWC01	44	1855	1743	3/11/16	4/5/17	Contig	University of Malaya	SAMN03480631	GCA_001588825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/825/GCA_001588825.1_ASM158882v1	-	DGIIBVI
Mycobacterium neoaurum	1795	PRJNA274592	274592	Terrabacteria group	Actinobacteria	5.39053	66.9	-	JXYZ01	33	5094	4961	3/20/15	4/10/17	Contig	Jiangxi Normal University	SAMN03329538	GCA_000959045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/045/GCA_000959045.1_ASM95904v1	-	MN4
Mycobacterium asiaticum	1790	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.11607	66.4	-	LZKS01	194	5760	5409	6/17/16	4/5/17	Contig	JCVI	SAMN04634199	GCA_001672925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/925/GCA_001672925.1_ASM167292v1	-	1137369.8
Desulfovibrio desulfuricans	876	PRJEB18321	355757	Proteobacteria	delta/epsilon subdivisions	3.54481	45.1	-	FQZR01	27	3199	3071	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660830	GCA_900142115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/115/GCA_900142115.1_IMG-taxon_2585428154_annotated_assembly	-	DSM 17919
Escherichia coli str. K-12 substr. MG1655	511145	PRJNA268139	268139	Proteobacteria	Gammaproteobacteria	4.64166	50.8	chromosome:NZ_CP012868.1/CP012868.1	-	1	4786	4478	10/8/15	2/24/17	Complete Genome	Indian Institute of Science	SAMN03203487	GCA_001308065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/308/065/GCA_001308065.1_ASM130806v1	26659679	K-12 substr. MG1655
Cellulosimicrobium cellulans LMG 16121	1242247	PRJEB571	181978	Terrabacteria group	Actinobacteria	4.27604	74.3	-	CAOI01	428	4093	3673	11/19/12	5/18/17	Contig	VIB-UGENT	SAMEA2272518	GCA_000321105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/105/GCA_000321105.1_ASM32110v1	-	LMG 16121
Porphyromonas gulae	111105	PRJNA253704	253704	FCB group	Bacteroidetes/Chlorobi group	2.3738	48.6	-	JRAE01	92	2129	1946	4/10/15	4/3/17	Scaffold	UC Davis	SAMN03002871	GCA_000971515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/515/GCA_000971515.1_ASM97151v1	-	COT-052_OH2199
Citrobacter amalonaticus	35703	PRJNA244491	244491	Proteobacteria	Gammaproteobacteria	5.27315	53.1	-	JMQQ01	110	5208	4939	7/18/14	4/2/17	Contig	University of Malaya	SAMN02726357	GCA_000731055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/055/GCA_000731055.1_ASM73105v1	26860259	L8A
Microbacterium oxydans	82380	PRJNA278185	278185	Terrabacteria group	Actinobacteria	4.01321	68.2	-	LDRQ01	136	3939	3815	12/22/15	4/11/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401349	GCA_001476635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/635/GCA_001476635.1_ASM147663v1	26793183	NS234
Escherichia coli	562	PRJNA268139	268139	Proteobacteria	Gammaproteobacteria	4.64168	50.8	chromosome:NZ_CP012869.1/CP012869.1	-	1	4786	4478	10/8/15	2/24/17	Complete Genome	Indian Institute of Science	SAMN03203488	GCA_001308125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/308/125/GCA_001308125.1_ASM130812v1	26659679	K-12 substr. MG1655_TMP32XR1
Achromobacter denitrificans	32002	PRJNA184698	184698	Proteobacteria	Betaproteobacteria	6.54264	67.6	-	MTLH01	222	6166	5929	6/14/17	6/19/17	Contig	Georgia Institute of Technology	SAMN06009452	GCA_002192685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/685/GCA_002192685.1_ASM219268v1	-	DP_1
Blastomonas sp. CCH3-A3	1768733	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	4.25176	64.3	-	LSHH01	148	4150	3984	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299404	GCA_001555695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/695/GCA_001555695.1_ASM155569v1	-	CCH3-A3
Porphyrobacter sp. AAP60	1523423	PRJNA255560	255560	Proteobacteria	Alphaproteobacteria	3.25374	62.7	-	LJHV01	30	3041	2951	9/22/15	4/11/17	Contig	"Institute of Microbiology, ASCR"	SAMN02927140	GCA_001296025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/025/GCA_001296025.1_ASM129602v1	-	AAP60
Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162	1293597	PRJDB804	243715	Terrabacteria group	Firmicutes	2.02593	47.8	-	BBBW01	114	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000443	GCA_001311765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/765/GCA_001311765.1_ASM131176v1	-	JCM 14600
Vibrio jasicida MWB 21	1280001	PRJDB721	202998	Proteobacteria	Gammaproteobacteria	5.96756	45.2	-	BAOA01	282	5504	5263	5/14/13	4/8/17	Contig	University of Miyazaki	SAMD00036654	GCA_000400245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/245/GCA_000400245.1_ASM40024v1	23710045	MWB 21
Ochrobactrum sp. UNC390CL2Tsu3S39	1449061	PRJNA234825	234825	Proteobacteria	Alphaproteobacteria	4.62463	56	-	JOOD01	16	4443	4315	6/25/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02744640	GCA_000712085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/085/GCA_000712085.1_ASM71208v1	-	UNC390CL2Tsu3S39
Pseudomonas umsongensis	198618	PRJNA390488	390488	Proteobacteria	Gammaproteobacteria	6.7014	59.7	-	NIWU01	14	6153	5930	7/28/17	8/1/17	Contig	Institute of Biochemistry and Biophysics Polish Academy of Sciences	SAMN07236649	GCA_002236105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/236/105/GCA_002236105.1_ASM223610v1	-	DSM 16611
Moorea producens PAL	1905009	PRJNA344491	344491	Terrabacteria group	Cyanobacteria/Melainabacteria group	8.37139	43.7	-	MKZR01	79	6889	6242	1/11/17	4/6/17	Scaffold	UCSD	SAMN02471690	GCA_001942475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/475/GCA_001942475.1_ASM194247v1	-	NAK12DEC93-3La
Staphylococcus pettenkoferi	170573	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.45732	39.1	-	JVAY01	33	2282	2191	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197790	GCA_001076995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/995/GCA_001076995.1_ASM107699v1	26230489	589_SHAE
Haloferax sp. ATCC BAA-644	1227462	PRJNA174907	174907	Euryarchaeota	Halobacteria	3.58703	66.7	-	AOLF01	38	3574	3437	2/4/13	4/10/17	Contig	"University of California, Davis"	SAMN02471677	GCA_000336975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/975/GCA_000336975.1_ASM33697v1	25393412	ATCC BAA-644
Escherichia coli	562	PRJNA268139	268139	Proteobacteria	Gammaproteobacteria	4.64169	50.8	chromosome:NZ_CP012870.1/CP012870.1	-	1	4786	4478	10/8/15	2/24/17	Complete Genome	Indian Institute of Science	SAMN03203489	GCA_001308165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/308/165/GCA_001308165.1_ASM130816v1	26659679	K-12 substr. MG1655_TMP32XR2
Leptospira alstonii	28452	PRJNA257125	257125	Spirochaetes	Spirochaetia	4.43013	42.5	-	JQRU01	217	4219	3933	2/24/16	4/11/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947767	GCA_001568455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/455/GCA_001568455.1_ASM156845v1	26833181	56667
Kocuria palustris	71999	PRJEB9961	310453	Terrabacteria group	Actinobacteria	3.08591	69.9	-	CZJR01	95	2761	2593	2/2/16	4/12/17	Contig	Universitetsparken 15	SAMEA3490271	GCA_900008265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/265/GCA_900008265.1_Draft_genome_of_Staphylococcus_pasteuri_strain_W5	-	W4
Bacillus stratosphericus	293386	PRJNA277416	277416	Terrabacteria group	Firmicutes	3.70042	41.3	-	LDWL01	57	3842	3723	6/24/15	4/3/17	Contig	University of Malaya	SAMN03751783	GCA_001038915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/915/GCA_001038915.1_ASM103891v1	-	LK23
Massilia sp. Root418	1736532	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	7.27294	65.9	-	LMEC01	26	6340	6150	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155801	GCA_001425265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/265/GCA_001425265.1_Root418	26633631	Root418
Chitinophaga sp. YR573	1881040	PRJEB17000	351169	FCB group	Bacteroidetes/Chlorobi group	8.06669	42.4	-	FOJF01	8	6477	6378	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05428988	GCA_900110995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/995/GCA_900110995.1_IMG-taxon_2690315653_annotated_assembly	-	YR573
Lactobacillus murinus	1622	PRJDB4897	393108	Terrabacteria group	Firmicutes	2.31725	40	-	BDFM01	358	2376	2093	7/4/17	7/15/17	Contig	"MIYARISAN Pharmaceutical Co., Ltd."	SAMD00053359	GCA_002217775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/775/GCA_002217775.1_ASM221777v1	-	KM-1
uncultured Anaerotruncus sp.	905011	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.26055	57.6	-	FMHG01	217	2897	2842	8/16/16	8/16/16	Scaffold	SC	SAMEA3545359	GCA_900066655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/655/GCA_900066655.1_14207_7_19	-	-
Paraclostridium bifermentans	1490	PRJNA353866	353866	Terrabacteria group	Firmicutes	3.52292	28.1	-	MWJI01	40	3371	3308	4/21/17	7/29/17	Contig	Northern Arizona University	SAMN06022750	GCA_002104065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/065/GCA_002104065.1_ASM210406v1	28733282	SU1074NT
Rhizobacter sp. Root404	1736528	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	5.2746	68.6	-	LMDS01	11	4922	4802	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155797	GCA_001425865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/865/GCA_001425865.1_Root404	26633631	Root404
Pelomonas sp. Root662	1736580	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	5.81256	67.8	-	LMHE01	18	5290	5161	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155849	GCA_001427705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/705/GCA_001427705.1_Root662	26633631	Root662
Mucilaginibacter sp. PPCGB 2223	1886027	PRJNA335830	335830	FCB group	Bacteroidetes/Chlorobi group	5.47859	45.7	-	MDJS01	8	4757	4681	8/16/16	4/13/17	Contig	Universidade Catolica de Brasilia	SAMN05463471	GCA_001705515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/515/GCA_001705515.1_ASM170551v1	-	PPCGB 2223
Bacteroides graminisolvens	477666	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.99322	41.9	-	DFUJ01	166	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450897	GCA_002380355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/355/GCA_002380355.1_ASM238035v1	28894102	-
Anoxybacillus sp. SK3-4	654421	PRJNA174378	174378	Terrabacteria group	Firmicutes	2.67159	41.9	-	ANOC01	148	2830	2665	8/5/13	4/17/17	Contig	Universiti Teknologi Malaysia	SAMN02471430	GCA_000443775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/775/GCA_000443775.1_SK3-4dn	23759984	SK3-4
Gordonia sp. HS-NH1	1435068	PRJNA293396	293396	Terrabacteria group	Actinobacteria	5.42926	67.8	-	LIYC01	145	4908	4727	10/28/15	4/18/17	Scaffold	Central China Normal University	SAMN04002531	GCA_001418765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/765/GCA_001418765.1_ASM141876v1	-	HS-NH1
Bacteroides pyogenes JCM 6292	1235809	PRJDB556	231995	FCB group	Bacteroidetes/Chlorobi group	3.40522	45.7	-	BAIQ01	112	2910	2283	12/18/13	4/9/17	Contig	The University of Tokyo	SAMD00013505	GCA_000511735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/735/GCA_000511735.1_ASM51173v1	24482517	JCM 6292
Leptotrichia sp. oral taxon 879 str. F0557	1227268	PRJNA173936	173936	Fusobacteria	Fusobacteriia	2.41575	29.7	-	AWVL01	79	2322	2173	9/18/13	4/9/17	Scaffold	Washington University	SAMN02436883	GCA_000469385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/385/GCA_000469385.1_ASM46938v1	-	F0557
Mycobacterium mucogenicum	56689	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.04978	66.9	-	LZSF01	315	5875	5481	6/17/16	4/12/17	Contig	JCVI	SAMN04634180	GCA_001665375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/375/GCA_001665375.1_ASM166537v1	-	1199456.5
Blautia sp. Marseille-P3201T	1907659	PRJEB18018	354772	Terrabacteria group	Firmicutes	2.9443	38	-	FPLC01	10	2833	2675	11/23/16	4/14/17	Scaffold	URMITE	SAMEA4555082	GCA_900120295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/295/GCA_900120295.1_PRJEB18018	-	Marseille-P3201
Microbacterium paraoxydans NBRC 103076	1223529	PRJDB454	173173	Terrabacteria group	Actinobacteria	3.46728	70	-	BCRH01	265	3509	3187	2/5/16	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00046493	GCA_001552495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/495/GCA_001552495.1_ASM155249v1	-	NBRC 103076
Microbacterium oleivorans	273677	PRJNA361212	361212	Terrabacteria group	Actinobacteria	2.95433	69	-	MTIO01	22	2879	2797	1/31/17	9/18/17	Contig	CEA	SAMN06227058	GCA_001975955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/955/GCA_001975955.1_ASM197595v1	28385837	A9
Moraxella atlantae	34059	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.34901	48.1	-	MXAO01	109	2146	2001	3/14/17	3/16/17	Scaffold	TAILORED-Treatment project	SAMN06556518	GCA_002027585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/585/GCA_002027585.1_ASM202758v1	-	CCUG 6415
Moraxella lacunata	477	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.83257	44	-	MXAN01	138	2745	2579	3/14/17	3/16/17	Scaffold	TAILORED-Treatment project	SAMN06556471	GCA_002027545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/545/GCA_002027545.1_ASM202754v1	-	CCUG 4441
Dickeya sp. MK7	1224145	PRJNA172956	172956	Proteobacteria	Gammaproteobacteria	4.9314	56.5926	chromosome:NZ_CM001984.1/CM001984.1	AOOO01	21	4381	4208	6/4/13	4/17/17	Chromosome	James Hutton Institute	SAMN02470104	GCA_000406305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/305/GCA_000406305.1_DXXMK7_1.0	24265502	MK7
Dickeya dianthicola IPO 980	1225780	PRJNA173395	173395	Proteobacteria	Gammaproteobacteria	4.84093	55.7044	chromosome:NZ_CM002023.1/CM002023.1	AOOS01	27	4381	4113	4/25/13	4/8/17	Chromosome	James Hutton Institute	SAMN02470087	GCA_000430955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/955/GCA_000430955.1_DDIIPO980_1.0	23887905	IPO 980
Dickeya solani MK16	1224152	PRJNA172958	172958	Proteobacteria	Gammaproteobacteria	4.87038	56.2159	chromosome:NZ_CM001842.1/CM001842.1	AOOQ01	3	4283	4097	4/3/13	4/1/17	Chromosome	James Hutton Institute	SAMN02470107	GCA_000365345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/345/GCA_000365345.1_DSOMK16_1.0	23887905	MK16
Lactobacillus florum DSM 22689 = JCM 16035	1423745	PRJDB766	243678	Terrabacteria group	Firmicutes	1.35514	41.1	-	BBAK01	25	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000451	GCA_001311215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/215/GCA_001311215.1_ASM131121v1	-	JCM 16035
Acinetobacter schindleri TG19614	1221311	PRJNA172718	172718	Proteobacteria	Gammaproteobacteria	3.19703	42.4	-	AMJK01	159	3050	2900	10/2/12	4/6/17	Contig	Translational Genomics Research Institute	SAMN02471245	GCA_000301815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/815/GCA_000301815.1_ASM30181v1	-	TG19614
Blastococcus sp. DSM 44272	1938746	PRJEB21394	391602	Terrabacteria group	Actinobacteria	5.09463	72.5	-	FZNO01	88	4867	4584	7/13/17	7/21/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06272737	GCA_900188025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/025/GCA_900188025.1_IMG-taxon_2724679778_annotated_assembly	-	DSM 44272
Shewanella algae JCM 21037 = NBRC 103173	1236544	PRJDB416	172615	Proteobacteria	Gammaproteobacteria	4.81725	53.1	-	BCZT01	143	4302	4178	3/11/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046904	GCA_001598875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/875/GCA_001598875.1_ASM159887v1	-	NBRC 103173
Bacillus sonorensis NBRC 101234 = KCTC 13918	1220591	PRJNA227788	227788	Terrabacteria group	Firmicutes	4.42896	45.5	-	AYTN01	63	4442	4150	12/12/13	4/9/17	Contig	KRIBB	SAMN02414601	GCA_000507125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/507/125/GCA_000507125.1_KCTC_13918_01	-	NBRC 101234 = KCTC 13918
Delftia tsuruhatensis NBRC 16741	1220577	PRJDB396	172595	Proteobacteria	Betaproteobacteria	6.60793	66.6	-	BCTO01	136	5960	5769	2/18/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046762	GCA_001571325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/325/GCA_001571325.1_ASM157132v1	-	NBRC 16741
Lelliottia amnigena NBRC 105700	1219085	PRJDB363	172332	Proteobacteria	Gammaproteobacteria	4.43188	52.9	-	BCNN01	20	4283	4087	1/6/16	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00034176	GCA_001514515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/515/GCA_001514515.1_ASM151451v1	-	NBRC 105700
Pluralibacter gergoviae	61647	PRJNA285085	285085	Proteobacteria	Gammaproteobacteria	5.29017	59.1	-	LDZG01	99	5031	4754	6/23/15	4/3/17	Contig	UCSF	SAMN03737705	GCA_001038235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/235/GCA_001038235.1_ASM103823v1	-	DS82E24
Vibrio gazogenes DSM 21264	1123492	PRJEB18157	355466	Proteobacteria	Gammaproteobacteria	4.63584	45.2	-	FQUH01	45	4155	3983	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745781	GCA_900129185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/185/GCA_900129185.1_IMG-taxon_2582581274_annotated_assembly	-	DSM 21264
Escherichia coli	562	PRJNA272568	272568	Proteobacteria	Gammaproteobacteria	4.58729	50.8	chromosome:NZ_CP011113.2/CP011113.2	-	1	4715	4389	8/31/15	2/26/17	Complete Genome	KRIBB	SAMN03384316	GCA_001276585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/585/GCA_001276585.2_ASM127658v2	-	RR1
Sphingomonas sanguinis NBRC 13937	1219054	PRJDB333	172302	Proteobacteria	Alphaproteobacteria	4.05309	66.1	-	BCTY01	134	3808	3682	2/23/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046745	GCA_001591005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/005/GCA_001591005.1_ASM159100v1	-	NBRC 13937
Sphingomonas paucimobilis	13689	PRJNA322169	322169	Proteobacteria	Alphaproteobacteria	5.40971	64.3	-	LYMJ01	144	5077	4882	5/25/16	4/12/17	Contig	CONICET-CINDEFI- La Plata	SAMN05049676	GCA_001651765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/765/GCA_001651765.1_ASM165176v1	-	20006FA
Comamonas aquatica	225991	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	3.2952	64.4	-	DBUP01	246	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06455761	GCA_002308395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/395/GCA_002308395.1_ASM230839v1	28894102	-
Chryseobacterium indologenes NBRC 14944	1218103	PRJDB276	172099	FCB group	Bacteroidetes/Chlorobi group	4.75394	37.2	-	BAVL01	33	4287	4173	1/11/14	4/9/17	Contig	National Institute of Technology and Evaluation	SAMD00041821	GCA_000520835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/835/GCA_000520835.1_ASM52083v1	-	NBRC 14944
Escherichia coli	562	PRJNA290012	290012	Proteobacteria	Gammaproteobacteria	4.61422	50.8	chromosome:NZ_CP012125.1/CP012125.1	-	1	4733	4414	7/21/15	2/24/17	Complete Genome	Joint Genome Institute	SAMN03861948	GCA_001183645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/645/GCA_001183645.1_ASM118364v1	-	DH1Ec095
Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535	1216967	PRJNA198814	198814	FCB group	Bacteroidetes/Chlorobi group	3.79693	36.6	-	ASAN01	115	3442	3279	5/24/13	4/1/17	Contig	Oklahoma State University	SAMN02470766	GCA_000401415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/415/GCA_000401415.1_ASM40141v1	23846266	ATCC 13253
Helicobacter heilmannii	35817	PRJEB7975	293180	Proteobacteria	delta/epsilon subdivisions	1.57083	47.9	-	CDMP01	93	1643	1466	8/17/15	4/11/17	Scaffold	UGENT	SAMEA3174164	GCA_001283045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/045/GCA_001283045.1_Hheil	-	-
Pseudomonas plecoglossicida	70775	PRJNA404002	404002	Proteobacteria	Gammaproteobacteria	6.2262	62.3	-	NTME01	133	6014	5719	9/17/17	9/19/17	Contig	"Sichuan Agricultural University,Sichuan, P.R. China"	SAMN07628851	GCA_002307455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/455/GCA_002307455.1_ASM230745v1	-	DJ-1
Pseudomonas parafulva NBRC 16636 = DSM 17004	1215114	PRJDB222	171641	Proteobacteria	Gammaproteobacteria	4.95436	62.5	-	BBIU01	55	4524	4382	7/10/14	4/2/17	Contig	National Institute of Technology and Evaluation	SAMD00018428	GCA_000730645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/645/GCA_000730645.1_ASM73064v1	-	NBRC 16636
Pseudomonas oryzihabitans	47885	PRJNA317602	317602	Proteobacteria	Gammaproteobacteria	5.32424	65.1	-	LWCR01	88	4962	4786	5/24/16	4/12/17	Contig	UC Berkeley	SAMN04621683	GCA_001650425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/425/GCA_001650425.1_ASM165042v1	-	H72
Pseudomonas nitroreducens HBP1	1437882	PRJNA232110	232110	Proteobacteria	Gammaproteobacteria	7.4082	64.2	-	AZRU01	212	7139	6245	1/13/14	4/9/17	Contig	CIB-CSIC	SAMN02597333	GCA_000518065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/065/GCA_000518065.1_PseAze1.0	24526653	HBP1
Pseudomonas citronellolis NBRC 103043	1215097	PRJDB205	171624	Proteobacteria	Gammaproteobacteria	7.19231	67.5	-	BCZY01	104	6341	6181	4/4/17	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046902	GCA_002091555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/555/GCA_002091555.1_ASM209155v1	-	NBRC 103043
Pseudomonas azotoformans	47878	PRJNA338491	338491	Proteobacteria	Gammaproteobacteria	6.71906	61	-	MDDQ01	36	6128	5934	11/7/16	4/13/17	Contig	Ottawa Research and Development Center	SAMN05559686	GCA_001870415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/415/GCA_001870415.1_ASM187041v1	-	LMG 21611
Pseudomonas alcaligenes MRY13-0052	1405803	PRJDB1470	222425	Proteobacteria	Gammaproteobacteria	6.87694	65.8	-	BATO01	237	6302	6022	10/1/13	4/9/17	Contig	"National Institute of Infectious Diseases, Japan"	SAMD00036765	GCA_000474255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/255/GCA_000474255.1_ASM47425v1	24179116	MRY13-0052
Aeromonas sp. L_1B5_3	1588629	PRJNA270791	270791	Proteobacteria	Gammaproteobacteria	4.84067	58.7	-	JXIR01	182	4517	4326	2/12/15	4/10/17	Contig	University of Malaya	SAMN03273301	GCA_000836735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/836/735/GCA_000836735.1_ASM83673v1	-	L_1B5_3
Mycobacterium fortuitum	1766	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.13493	66.3	-	LZSI01	237	6007	5716	6/17/16	4/5/17	Contig	JCVI	SAMN04634203	GCA_001665315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/315/GCA_001665315.1_ASM166531v1	-	E3377
Oscillibacter sp. ER4	1519439	PRJNA253252	253252	Terrabacteria group	Firmicutes	2.7297	57.2	-	JPJG01	131	2784	2608	10/9/14	4/9/17	Contig	Technical University of Denmark	SAMN02903324	GCA_000765235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/235/GCA_000765235.1_ASM76523v1	25163406	ER4
Limnohabitans sp. Rim28	1100720	PRJNA171293	171293	Proteobacteria	Betaproteobacteria	3.41171	58.5	-	ALKN01	73	3350	3264	8/28/12	4/8/17	Contig	"Institute of Microbiology, Academy of Sciences, Czech Republic"	SAMN02470021	GCA_000293865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/865/GCA_000293865.1_ASM29386v1	23105051	Rim28
Acidocella sp. 20-61-6	1970303	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.75441	61.3	-	NCAK01	1108	3214	3026	8/16/17	8/16/17	Scaffold	None	SAMN06622453	GCA_002255625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/625/GCA_002255625.1_ASM225562v1	-	-
Nocardia seriolae	37332	PRJNA373810	373810	Terrabacteria group	Actinobacteria	7.89197	68.2	-	MVAC01	347	7381	6905	4/17/17	4/21/17	Scaffold	Chinese Academy of Fishery Sciences 	SAMN06315324	GCA_002093935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/935/GCA_002093935.1_ASM209393v1	-	SY-24
Burkholderia pyrrocinia	60550	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.25686	67.3	-	LOZU01	132	7647	7277	1/22/16	4/11/17	Contig	Northern Arizona University	SAMN03449330	GCA_001527685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/685/GCA_001527685.1_ASM152768v1	-	MSMB1755
Clostridium tyrobutyricum DSM 2637 = ATCC 25755 = JCM 11008	1121342	PRJNA194074	194074	Terrabacteria group	Firmicutes	3.0107	30.8	-	APMH01	76	2981	2866	4/9/13	4/1/17	Contig	Nanjing university of technology	SAMN02470572	GCA_000359585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/585/GCA_000359585.1_ATCC25755	23723404	ATCC 25755
Halorubrum sp. Ib24	1383850	PRJNA232799	232799	Euryarchaeota	Halobacteria	2.97057	67.5	-	NHOX01	45	2853	2574	8/15/17	8/17/17	Contig	University of Conn.	SAMN02716047	GCA_002252745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/745/GCA_002252745.1_ASM225274v1	24782836	Ib24
Pseudoxanthomonas sp. Root65	1736576	PRJNA297942	297942	Proteobacteria	Gammaproteobacteria	3.8936	67.6	-	LMHA01	6	3559	3469	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155845	GCA_001427635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/635/GCA_001427635.1_Root65	26633631	Root65
Pseudomonas psychrophila	122355	PRJNA274345	274345	Proteobacteria	Gammaproteobacteria	5.33401	57.5	-	JYKZ01	126	4891	4710	6/30/15	6/26/17	Contig	"Zentralinstitut fuer Ernaehrungs- und Lebensmittelforschung (ZIEL), WZW, TUM"	SAMN03328796	GCA_001043005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/005/GCA_001043005.1_G8688	26675012	DSM 17535
Thioclava sp. DLFJ5-1	1915314	PRJNA352379	352379	Proteobacteria	Alphaproteobacteria	4.331	63.9	-	MPZU01	14	4150	4052	3/6/17	3/9/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05970069	GCA_002020115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/115/GCA_002020115.1_ASM202011v1	-	DLFJ5-1
Butyricicoccus pullicaecorum	501571	PRJEB17865	353807	Terrabacteria group	Firmicutes	3.28449	54.1	-	FRDE01	17	3170	3043	12/3/16	4/17/17	Scaffold	Ghent University-Faculty of Veterinary medicine	SAMEA4545681	GCA_900143195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/195/GCA_900143195.1_501571.5	-	-
Hyphomonas sp. L-53-1-40	1207058	PRJNA170405	170405	Proteobacteria	Alphaproteobacteria	3.31097	58.3	-	AWFI01	21	3215	3086	5/6/14	4/17/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02746326	GCA_000682775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/775/GCA_000682775.1_SOAPdenovo_v1.05	-	L-53-1-40
Aeromonas media	651	PRJEB7032	267803	Proteobacteria	Gammaproteobacteria	4.48434	61.1	-	CDBZ01	233	4263	3891	11/24/14	4/10/17	Scaffold	UCONNMISEQ	SAMEA2752416	GCA_000819985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/985/GCA_000819985.1_PRJEB7032	-	CECT 4232
Escherichia coli	562	PRJNA290012	290012	Proteobacteria	Gammaproteobacteria	4.61236	50.8	chromosome:NZ_CP012126.1/CP012126.1	-	1	4734	4413	7/21/15	2/24/17	Complete Genome	Joint Genome Institute	SAMN03863255	GCA_001183665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/665/GCA_001183665.1_ASM118366v1	-	DH1Ec104
Aureimonas ureilytica	401562	PRJNA278210	278210	Proteobacteria	Alphaproteobacteria	5.11955	65	-	LDPZ01	287	4737	4488	12/22/15	4/11/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401375	GCA_001475555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/555/GCA_001475555.1_ASM147555v1	26793183	NS226
Corynebacterium propinquum	43769	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.55312	56.4	-	JVSI01	67	2301	2168	7/10/15	4/10/17	Contig	University of Washington	SAMN03197338	GCA_001054395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/395/GCA_001054395.1_ASM105439v1	26230489	149_CJEI
Wohlfahrtiimonas chitiniclastica	400946	PRJNA319640	319640	Proteobacteria	Gammaproteobacteria	2.18052	43.7	-	LWST01	12	2088	1992	4/30/16	4/12/17	Contig	Universidade do Estado do Rio de Janeiro	SAMN04902032	GCA_001634425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/425/GCA_001634425.1_ASM163442v1	-	20
Sinorhizobium sp. PC2	760136	PRJNA169749	169749	Proteobacteria	Alphaproteobacteria	8.45896	61.3	-	LATE01	171	8261	7099	4/6/15	4/17/17	Contig	DOE Joint Genome Institute	SAMN02744092	GCA_000969585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/585/GCA_000969585.1_ASM96958v1	27340511	PC2
Hoeflea sp. BRH_c9	1629712	PRJNA257561	257561	Proteobacteria	Alphaproteobacteria	3.86364	61.2	-	LADQ01	279	3888	3670	3/24/15	3/24/15	Contig	EPFL	SAMN03400156	GCA_000961635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/635/GCA_000961635.1_41k	-	-
Mariprofundus sp. UBA1543	1946830	PRJNA348753	348753	Proteobacteria	Zetaproteobacteria	2.3495	55.4	-	DCPN01	65	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455902	GCA_002323755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/755/GCA_002323755.1_ASM232375v1	28894102	-
Pandoraea sp. ISTKB	1586708	PRJNA325244	325244	Proteobacteria	Betaproteobacteria	6.36797	63.2	-	MAOS01	115	5592	5423	9/7/16	4/13/17	Contig	National Institute of Plant Genome Research	SAMN05226146	GCA_001721285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/285/GCA_001721285.1_PanISTKB1.0	-	ISTKB
Rhodopirellula sp. TMED11	1986614	PRJNA385857	385857	PVC group	Planctomycetes	6.56603	55.4	-	NHBQ01	131	4761	4648	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971865	GCA_002167455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/455/GCA_002167455.1_ASM216745v1	-	-
Methylotenera sp. N17	1502761	PRJNA248504	248504	Proteobacteria	Betaproteobacteria	2.75367	45.7	-	JUGE01	1	2645	2578	12/9/14	6/20/17	Contig	DOE Joint Genome Institute	SAMN02800695	GCA_000799155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/155/GCA_000799155.1_ASM79915v1	25657279	N17
Porphyromonas macacae	28115	PRJNA253617	253617	FCB group	Bacteroidetes/Chlorobi group	2.36332	43.2	-	JRFA01	32	2072	1973	10/27/14	4/9/17	Contig	UC Davis	SAMN03004342	GCA_000769035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/035/GCA_000769035.1_ASM76903v1	25858832	COT-192 OH2859
Rodentibacter pneumotropicus	758	PRJNA343597	343597	Proteobacteria	Gammaproteobacteria	2.307	39.8	-	MJMB01	48	2203	2071	2/15/17	2/22/17	Contig	University of Copenhagen	SAMN05791174	GCA_001998505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/505/GCA_001998505.1_ASM199850v1	-	Ln316_4
Oligella urethralis	90245	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	2.50142	46.1	-	JVJW01	142	2383	2210	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197558	GCA_001076415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/415/GCA_001076415.1_ASM107641v1	26230489	368_TASI
Bacteriovorax sp. Seq25_V	1201288	PRJNA210326	210326	Proteobacteria	Oligoflexia	3.45079	36	-	AUNI01	21	3350	3289	8/16/13	8/21/17	Contig	J. Craig Venter Institute	SAMN02436250	GCA_000447795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/795/GCA_000447795.1_CLC_Hybrid_Filtered	-	Seq25_V
Escherichia coli	562	PRJNA290012	290012	Proteobacteria	Gammaproteobacteria	4.60952	50.8	chromosome:NZ_CP012127.1/CP012127.1	-	1	4732	4411	7/21/15	2/24/17	Complete Genome	Joint Genome Institute	SAMN03863378	GCA_001183685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/685/GCA_001183685.1_ASM118368v1	-	DH1Ec169
Alicycliphilus sp. UBA880	1946006	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	3.03471	66.7	-	DBFM01	141	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457645	GCA_002294305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/305/GCA_002294305.1_ASM229430v1	28894102	-
Acinetobacter baylyi	202950	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.60242	40.3	-	BCMA01	34	3358	3261	12/2/15	4/6/17	Contig	National Institute of Technology and Evaluation	SAMD00019871	GCA_001485005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/005/GCA_001485005.1_ASM148500v1	-	GTC 3695
Pseudomonas marginalis	298	PRJNA296744	296744	Proteobacteria	Gammaproteobacteria	6.6148	60.4	-	LKEG01	62	6071	5835	5/16/16	4/12/17	Scaffold	New Zealand Institute for Plant & Food research	SAMN04102829	GCA_001645105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/105/GCA_001645105.1_ASM164510v1	-	ICMP 3553
Paraburkholderia terrae	311230	PRJNA385388	385388	Proteobacteria	Betaproteobacteria	11.0199	61.9	-	NFVE01	787	10256	9529	5/24/17	5/26/17	Contig	University of Groningen	SAMN06888376	GCA_002157295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/295/GCA_002157295.1_ASM215729v1	-	BS007
Bacillus endophyticus DSM 13796	1121089	PRJEB17440	351631	Terrabacteria group	Firmicutes	5.11842	36.5	-	FOXX01	38	5147	4926	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745910	GCA_900115845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/845/GCA_900115845.1_IMG-taxon_2599185264_annotated_assembly	-	DSM 13796
Virgibacillus halodenitrificans	1482	PRJEB19297	369768	Terrabacteria group	Firmicutes	3.81652	37.3	-	FUHR01	8	3790	3676	2/8/17	4/17/17	Contig	URMITE	SAMEA78475168	GCA_900162105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/105/GCA_900162105.1_PRJEB19297	-	Marseille-P736
Escherichia coli	562	PRJNA275043	275043	Proteobacteria	Gammaproteobacteria	4.50145	50.8	chromosome:NZ_CP011938.1/CP011938.1	-	1	4649	4293	6/25/15	2/23/17	Complete Genome	Yonsei University	SAMN03761398	GCA_001039415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/415/GCA_001039415.1_ASM103941v1	26531007	C43(DE3)
Snodgrassella alvi	1196083	PRJNA339423	339423	Proteobacteria	Betaproteobacteria	2.50165	41.2	-	NAGY01	63	2310	2192	4/13/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603554	GCA_002088405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/405/GCA_002088405.1_ASM208840v1	-	A-10-12
Xanthomonas translucens DAR61454	1205753	PRJNA169523	169523	Proteobacteria	Gammaproteobacteria	4.46718	68.1	-	AMXY01	215	3861	3438	1/4/13	6/15/17	Scaffold	CSIRO	SAMN02402357	GCA_000334075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/075/GCA_000334075.1_X61454_v2	24416331	DAR61454
Pseudomonas alcaliphila NBRC 102411	1215093	PRJDB201	171620	Proteobacteria	Gammaproteobacteria	5.32727	62.9	-	BCZV01	29	4997	4896	4/4/17	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046923	GCA_002091495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/495/GCA_002091495.1_ASM209149v1	-	NBRC 102411
Leptospira sp. B5-022	1242992	PRJNA178174	178174	Spirochaetes	Spirochaetia	4.18004	41.7	-	ANIJ01	49	3890	3772	3/15/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01801603	GCA_000347035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/035/GCA_000347035.1_gls454192v01	-	B5-022
Acinetobacter venetianus	52133	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.39909	39	-	BCLZ01	46	3278	3158	12/2/15	4/4/17	Contig	National Institute of Technology and Evaluation	SAMD00019904	GCA_001484985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/985/GCA_001484985.1_ASM148498v1	-	GTC 14626
Vibrio tasmaniensis	212663	PRJNA322704	322704	Proteobacteria	Gammaproteobacteria	5.65463	44	-	LZFY01	72	5108	4857	6/23/16	4/5/17	Contig	UC Davis	SAMN05172615	GCA_001675955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/955/GCA_001675955.1_ASM167595v1	-	UCD-FRSSP16_35
Vibrio genomosp. F10 str. 9ZB36	1187845	PRJNA164821	164821	Proteobacteria	Gammaproteobacteria	4.26471	43.4	-	AJYN02	174	3786	3672	8/13/12	4/18/17	Scaffold	MIT	SAMN02470498	GCA_000287195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/195/GCA_000287195.2_ASM28719v2	22955834	9ZB36
Vibrio crassostreae	246167	PRJEB5880	284687	Proteobacteria	Gammaproteobacteria	5.59782	44.2	-	CCJU01	145	4975	4738	5/20/15	4/3/17	Contig	STATION BIOLOGIQUE DE ROSCOFF	SAMEA2591294	GCA_001048495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/495/GCA_001048495.1_VRSK38_PRJEB5880	-	J5-19
Escherichia coli K-12	83333	PRJNA224130	224130	Proteobacteria	Gammaproteobacteria	4.62234	50.8	chromosome:NZ_CP011342.2/CP011342.2	-	1	4752	4430	6/5/15	2/25/17	Complete Genome	"College of Life Sciences, Beijing Normal University"	SAMN02404591	GCA_001020945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/945/GCA_001020945.2_ASM102094v2	26664654	K-12 substr. GM4792
Vibrio breoganii ZF-29	1188257	PRJNA164811	164811	Proteobacteria	Gammaproteobacteria	4.27931	45.2	-	AJYM02	74	3850	3616	8/13/12	4/13/17	Scaffold	MIT	SAMN02470438	GCA_000286995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/995/GCA_000286995.2_ASM28699v2	22955834	ZF-29
Enterovibrio calviensis 1F-230	1190607	PRJNA164641	164641	Proteobacteria	Gammaproteobacteria	5.45763	47.7	-	AJYH02	288	4888	4657	8/13/12	4/13/17	Scaffold	MIT	SAMN02470495	GCA_000286915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/915/GCA_000286915.2_ASM28691v2	22955834	1F-230
Capnocytophaga cynodegmi	28189	PRJEB8053	270930	FCB group	Bacteroidetes/Chlorobi group	2.66757	34.4	-	CDOF01	111	2368	2248	1/20/15	4/10/17	Contig	"BIOZENTRUM, UNIVERSITY OF BASEL"	SAMEA3180124	GCA_000827655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/827/655/GCA_000827655.1_Ccyn49044.1	-	Ccyn_ATCC49044
Variovorax sp. Root318D1	1736513	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	5.74583	65.8	-	LMCQ01	25	5415	5252	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155782	GCA_001424835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/835/GCA_001424835.1_Root318D1	26633631	Root318D1
Rhodovulum sp. NI22	1469613	PRJNA258472	258472	Proteobacteria	Alphaproteobacteria	3.8199	64.4	-	JQFU01	120	3803	3611	9/22/14	4/9/17	Contig	UDRI	SAMN02998080	GCA_000756565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/565/GCA_000756565.1_ASM75656v1	25614575	NI22
Thiomicrospira sp. Milos-T1	90813	PRJNA204054	204054	Proteobacteria	Gammaproteobacteria	2.34443	43.9	-	JQMT01	1	2244	2153	8/28/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02745860	GCA_000744875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/875/GCA_000744875.1_ASM74487v1	-	Milos-T1
Enterovibrio norvegicus FF-162	1190605	PRJNA164635	164635	Proteobacteria	Gammaproteobacteria	5.05166	47.3	-	AJYE02	472	4630	4237	8/13/12	4/13/17	Scaffold	MIT	SAMN02470493	GCA_000286855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/855/GCA_000286855.2_ASM28685v2	22955834	FF-162
Micavibrio sp. UBA671	1946933	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.26237	47.1	-	DBNN01	209	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455250	GCA_002299145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/145/GCA_002299145.1_ASM229914v1	28894102	-
Rickettsia sp. wq	1851203	PRJNA322113	322113	Proteobacteria	Alphaproteobacteria	1.19596	32.2	-	LYMW01	284	1207	1008	8/18/16	4/13/17	Contig	Agricultural Research Organisation - volcani center - Israel	SAMN05017604	GCA_001707805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/805/GCA_001707805.1_ASM170780v1	-	wq
Xanthobacter sp. 35-67-6	1971594	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	0.343889	66.7	-	NCFF01	161	408	386	8/16/17	8/16/17	Scaffold	None	SAMN06622327	GCA_002281045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/045/GCA_002281045.1_ASM228104v1	-	-
Bordetella sp. SCN 67-23	1660091	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	6.72533	67.2	-	MEDQ01	187	6405	6144	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652436	GCA_001724095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/095/GCA_001724095.1_ASM172409v1	26031303	-
Mesorhizobium sp. WSM3224	1040986	PRJNA162985	162985	Proteobacteria	Alphaproteobacteria	7.0968	63.1	-	ATYO01	72	6986	6637	7/15/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440597	GCA_000427725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/725/GCA_000427725.1_ASM42772v1	-	WSM3224
Cycloclasticus sp. Phe_18	1795870	PRJNA301966	301966	Proteobacteria	Gammaproteobacteria	1.33325	42.4	-	LSMQ01	126	1345	1236	2/23/16	2/23/16	Contig	The University of Texas at Austin	SAMN04458025	GCA_001566825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/825/GCA_001566825.1_ASM156682v1	-	-
Hydrogenophaga sp. A37	1945864	PRJNA369723	369723	Proteobacteria	Betaproteobacteria	5.55038	65.5	-	MUNZ01	195	5255	5062	2/16/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN06292983	GCA_002001205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/205/GCA_002001205.1_ASM200120v1	-	A37
Oceanicaulis sp. BBD 1991-10	1852617	PRJNA281489	281489	Proteobacteria	Alphaproteobacteria	3.22351	65.4	-	LYSW01	89	-	-	6/3/16	6/3/16	Scaffold	University of Michigan	SAMN04939357	GCA_001657295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/295/GCA_001657295.1_ASM165729v1	-	-
Phyllobacterium sp. OV277	1882772	PRJEB16258	348878	Proteobacteria	Alphaproteobacteria	5.33933	55.1	-	FNIY01	27	5157	5039	10/20/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443582	GCA_900104355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/355/GCA_900104355.1_IMG-taxon_2687453676_annotated_assembly	-	OV277
Brevibacterium sp. HMSC063G07	1739261	PRJNA299911	299911	Terrabacteria group	Actinobacteria	2.48855	62.4	-	LTHM01	55	2261	2157	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477574	GCA_001810665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/665/GCA_001810665.1_ASM181066v1	-	HMSC063G07
Cellulomonas sp. Root137	1736459	PRJNA297942	297942	Terrabacteria group	Actinobacteria	4.39297	72.5	-	LMFG01	8	4138	4030	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155728	GCA_001426725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/725/GCA_001426725.1_Root137	26633631	Root137
Escherichia coli K-12	83333	PRJNA224131	224131	Proteobacteria	Gammaproteobacteria	4.62166	50.8	chromosome:NZ_CP011343.2/CP011343.2	-	1	4757	4429	6/5/15	2/25/17	Complete Genome	"College of Life Sciences, Beijing Normal University"	SAMN02404590	GCA_001021005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/005/GCA_001021005.2_ASM102100v2	26664654	K-12 substr. GM4792
Cellvibrio sp. pealriver	1622269	PRJNA276784	276784	Proteobacteria	Gammaproteobacteria	4.42792	47.6	-	JZSC01	2	3840	3725	7/20/15	4/10/17	Scaffold	SCUT	SAMN03380777	GCA_001183545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/545/GCA_001183545.1_ASM118354v1	-	pealriver
Dehalobacter sp. FTH1	1035308	PRJNA165241	165241	Terrabacteria group	Firmicutes	6.32936	58.9	-	AQYY01	33	5934	5727	4/19/13	5/18/17	Contig	DOE Joint Genome Institute	SAMN02256502	GCA_000372005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/005/GCA_000372005.1_ASM37200v1	-	FTH1
Spirochaeta sp. UBA1101	1947540	PRJNA348753	348753	Spirochaetes	Spirochaetia	3.81347	63.3	-	DCBS01	273	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06455521	GCA_002313505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/505/GCA_002313505.1_ASM231350v1	28894102	-
Atopobium sp. BV3Ac4	1111121	PRJNA89625	89625	Terrabacteria group	Actinobacteria	1.71763	48.7	-	AWUQ01	8	1608	1540	9/19/13	4/9/17	Contig	JCVI	SAMN00829142	GCA_000468815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/815/GCA_000468815.1_AspBV3AC4v1.0	-	BV3Ac4
Sulfurimonas sp. RIFCSPLOWO2_12_36_12	1802253	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.18286	36.2	-	MIBZ01	69	2261	2139	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313803	GCA_001829675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/675/GCA_001829675.1_ASM182967v1	27774985	-
Escherichia coli	562	PRJNA241498	241498	Proteobacteria	Gammaproteobacteria	4.63346	50.8	chromosome:NZ_CP011320.1/CP011320.1	-	1	4772	4470	5/6/15	2/23/17	Complete Genome	AstraZeneca	SAMN03276545	GCA_000988355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/355/GCA_000988355.1_ASM98835v1	26438293	SQ37
Actinoplanes sp. TFC3	1710355	PRJNA294424	294424	Terrabacteria group	Actinobacteria	7.75228	69	-	LOJP01	24	7168	6729	2/9/16	4/12/17	Scaffold	"INSTITUTO DE INVESTIGACIONES BIOMEDICAS, UNIVERSIDAD NACIONAL AUTONOMA DE MEXICO"	SAMN03981066	GCA_001553785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/785/GCA_001553785.1_ASM155378v1	27013046	TFC3
Mitsuaria sp. H24L5A	557855	PRJEA73045	73045	Proteobacteria	Betaproteobacteria	6.65505	67.8	-	CAFG01	607	-	-	10/11/11	12/15/11	Contig	The Ohio State Univeristy	SAMEA2272077	GCA_000285635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/635/GCA_000285635.1_ASM28563v1	-	H24L5A
Xanthomonas sp. SHU199	1240783	PRJNA177167	177167	Proteobacteria	Gammaproteobacteria	4.83722	68.9	-	AQOI01	880	4387	3779	4/15/13	6/15/17	Contig	Colorado State University	SAMN02469647	GCA_000364665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/665/GCA_000364665.1_SHU199	-	SHU199
Anaerococcus sp. Marseille-P2143	1745712	PRJEB18044	354749	Terrabacteria group	Firmicutes	2.19011	33.5	-	FQRX01	10	2069	1937	11/25/16	4/10/17	Scaffold	URMITE	SAMEA4555798	GCA_900128425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/425/GCA_900128425.1_PRJEB18044	-	Marseille-P2143
Aeromicrobium sp. Root472D3	1736540	PRJNA297942	297942	Terrabacteria group	Actinobacteria	3.70787	71.3	-	LMET01	4	3641	3552	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155809	GCA_001426485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/485/GCA_001426485.1_Root472D3	26633631	Root472D3
Chromobacterium sp. C-61	238241	PRJEA68181	68181	Proteobacteria	Betaproteobacteria	5.11574	62.7	-	CAEE01	1118	4893	4281	8/19/11	5/18/17	Scaffold	Chonnam National University	SAMEA2272075	GCA_000285415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/415/GCA_000285415.1_ASM28541v1	-	C-61
Nesterenkonia sp. JCM 19054	1460646	PRJDB1624	243820	Terrabacteria group	Actinobacteria	2.50043	67.1	-	BAXI01	1086	-	-	10/1/15	10/1/15	Contig	"Microbe Division/JCM, RIKEN BioResource Center"	SAMD00000385	GCA_001310495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/495/GCA_001310495.1_ASM131049v1	-	JCM 19054
Acidiphilium sp. 20-67-58	1970291	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	3.4052	66.6	-	NCAS01	119	3194	3073	8/16/17	8/16/17	Contig	None	SAMN06622445	GCA_002255515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/515/GCA_002255515.1_ASM225551v1	-	-
Leuconostoc sp. UBA4400	1946756	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.50828	38.9	-	DGRA01	133	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451891	GCA_002389835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/835/GCA_002389835.1_ASM238983v1	28894102	-
Oceanicola sp. 22II-s10i	1317116	PRJNA196733	196733	Proteobacteria	Alphaproteobacteria	5.11456	66.3	-	AQQU01	39	4941	4823	6/28/17	6/30/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN07274259	GCA_002210105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/210/105/GCA_002210105.1_ASM221010v1	-	22II-s10i
Hyphomicrobium sp. CS1BSMeth3	1892844	PRJEB17662	353788	Proteobacteria	Alphaproteobacteria	6.02081	64.4	-	FPEI01	6	5516	5411	11/16/16	4/16/17	Contig	Griffith University	SAMEA4534594	GCA_900117415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/415/GCA_900117415.1_CS1BSMeth3_assembly_1	-	-
Idiomarina sp. 5.13	1929465	PRJNA357535	357535	Proteobacteria	Gammaproteobacteria	4.5799	46.1	-	MSEI01	87	4053	3877	1/6/17	4/16/17	Scaffold	NCAOR	SAMN06142981	GCA_001938545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/545/GCA_001938545.1_ASM193854v1	-	5.13
Escherichia coli	562	PRJNA241498	241498	Proteobacteria	Gammaproteobacteria	4.61088	50.8	chromosome:NZ_CP011321.1/CP011321.1	-	1	4752	4472	5/6/15	2/23/17	Complete Genome	AstraZeneca	SAMN03276546	GCA_000988385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/385/GCA_000988385.1_ASM98838v1	26438293	SQ88
Escherichia coli	562	PRJNA241498	241498	Proteobacteria	Gammaproteobacteria	4.6053	50.8	chromosome:NZ_CP011324.1/CP011324.1	-	1	4747	4471	5/6/15	2/23/17	Complete Genome	AstraZeneca	SAMN03276542	GCA_000988465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/465/GCA_000988465.1_ASM98846v1	26438293	SQ2203
Nitrospina sp. SCGC_AAA799_C22	1628279	PRJNA276499	276499	Nitrospinae/Tectomicrobia group	Nitrospinae	1.67817	50.5	-	JZKJ01	88	1616	1353	7/1/15	7/1/15	Contig	King Abdullah University of Science and Technology (KAUST)	SAMN03376160	GCA_001044495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/495/GCA_001044495.1_ASM104449v1	-	-
Candidatus Nitrosopumilus sp. DDS1	1679446	PRJNA289040	289040	TACK group	Thaumarchaeota	1.75395	33	-	LGTD01	5	-	-	6/21/16	6/21/16	Scaffold	Chungbuk National University	SAMN03840809	GCA_001674955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/955/GCA_001674955.1_ASM167495v1	-	DDS1
Rheinheimera sp. SA_1	1827365	PRJNA317721	317721	Proteobacteria	Gammaproteobacteria	5.1637	49.3	-	LXWK01	22	4323	4211	6/18/16	4/13/17	Contig	TU Berlin	SAMN04623585	GCA_001669775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/775/GCA_001669775.1_ASM166977v1	-	SA_1
Escherichia coli	562	PRJNA241498	241498	Proteobacteria	Gammaproteobacteria	4.60513	50.8	chromosome:CP011322.1	-	1	4457	4139	5/6/15	12/22/15	Complete Genome	AstraZeneca	SAMN03276543	GCA_000988425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/425/GCA_000988425.1_ASM98842v1	-	SQ110
Megasphaera sp. NM10	1273103	PRJNA192806	192806	Terrabacteria group	Firmicutes	2.61528	53.2	-	APHY01	175	2603	2224	7/2/13	4/8/17	Contig	National Centre for Cell Science	SAMN02470673	GCA_000417505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/505/GCA_000417505.1_NM10version1	24260205	NM10
Citromicrobium sp. JL31	1628321	PRJNA277576	277576	Proteobacteria	Alphaproteobacteria	3.16598	65.1	-	LAIH01	22	3111	3029	10/2/15	4/11/17	Contig	Xiamen University	SAMN03393653	GCA_001306285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/285/GCA_001306285.1_ASM130628v1	-	JL31
Desulfosporosinus sp. BG	1633135	PRJNA327476	327476	Terrabacteria group	Firmicutes	4.52325	42.4	-	MASS01	135	4379	4061	8/18/16	4/13/17	Contig	"Institute of Bioengineering, Research Center of Biotechnology of RAS"	SAMN05356743	GCA_001707885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/885/GCA_001707885.1_ASM170788v1	-	BG
Methylocystis sp. SB2	743836	PRJNA219752	219752	Proteobacteria	Alphaproteobacteria	3.64463	62.7	-	AYNA01	149	3586	3433	11/26/13	4/16/17	Scaffold	University of Michigan	SAMN02471884	GCA_000499825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/825/GCA_000499825.2_Methylocystis_strain_SB2	24610846	SB2
Tepidanaerobacter sp. UBA3921	1947649	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.77529	40.9	-	DGER01	134	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457315	GCA_002386075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/075/GCA_002386075.1_ASM238607v1	28894102	-
Methanobacterium sp. Maddingley MBC34	1220534	PRJNA172217	172217	Euryarchaeota	Methanobacteria	2.42015	38.6	-	AMGN01	104	2453	2411	11/2/12	9/26/13	Contig	Commonwealth Scientific and Industrial Research Organisation	SAMN01813472	GCA_000309865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/865/GCA_000309865.1_MMad_1.0	23405289	-
Escherichia coli	562	PRJNA241498	241498	Proteobacteria	Gammaproteobacteria	4.5997	50.8	chromosome:CP011323.1	-	1	4453	4140	5/6/15	12/22/15	Complete Genome	AstraZeneca	SAMN03276544	GCA_000988445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/445/GCA_000988445.1_ASM98844v1	-	SQ171
Rothia sp. HMSC071F11	1715034	PRJNA296161	296161	Terrabacteria group	Actinobacteria	2.54786	53.6	-	LTKI01	51	2237	2056	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04495786	GCA_001809115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/115/GCA_001809115.1_ASM180911v1	-	HMSC071F11
Rhodanobacter sp. Root561	1736560	PRJNA297942	297942	Proteobacteria	Gammaproteobacteria	4.04863	66.4	-	LMGH01	17	3614	3510	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155829	GCA_001427365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/365/GCA_001427365.1_Root561	26633631	Root561
Thiomonas sp. ACO7	1629664	PRJEB8792	321285	Proteobacteria	Betaproteobacteria	3.66362	63.8	-	CTRL01	68	3514	3355	5/11/16	3/18/17	Contig	Genoscope CEA	SAMEA3305447	GCA_900004405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/004/405/GCA_900004405.1_BBA-G_PRJEB8792_v1	-	AC07
Selenomonas sp. oral taxon 126	712528	PRJNA282954	282954	Terrabacteria group	Firmicutes	2.88604	57	chromosome:NZ_CP016201.1/CP016201.1	-	1	2789	2473	7/11/16	4/17/17	Chromosome	The Forsyth Institute	SAMN03897727	GCA_001683335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/335/GCA_001683335.1_ASM168333v1	-	W7667
Aerococcus sp. HMSC062A02	1715105	PRJNA296233	296233	Terrabacteria group	Firmicutes	2.13536	47.3	-	LTJN01	49	1962	1887	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477515	GCA_001809535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/535/GCA_001809535.1_ASM180953v1	-	HMSC062A02
Escherichia coli	562	PRJNA244370	244370	Proteobacteria	Gammaproteobacteria	5.15343	50.8	chromosome:NZ_CP007594.1/CP007594.1	-	1	5405	4978	5/4/15	2/23/17	Complete Genome	"Institute of Subtropical Agriculture, Chinese Academy of Sciences"	SAMN03576594	GCA_000987875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/987/875/GCA_000987875.1_ASM98787v1	-	SEC470
Haemophilus sp. HMSC066D03	1739280	PRJNA299930	299930	Proteobacteria	Gammaproteobacteria	1.97402	39.4	-	LWQN01	35	1962	1861	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477593	GCA_001811025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/025/GCA_001811025.1_ASM181102v1	-	HMSC066D03
Escherichia coli K-12	83333	PRJNA271807	271807	Proteobacteria	Gammaproteobacteria	4.61973	50.8	chromosome:NZ_CP010438.1/CP010438.1	-	1	4768	4431	4/21/15	2/23/17	Complete Genome	New England Biolabs	SAMN03277616	GCA_000974405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/405/GCA_000974405.1_ASM97440v1	-	ER3454
Afipia sp. OHSU_II-C1	1297860	PRJNA191806	191806	Proteobacteria	Alphaproteobacteria	5.08469	61.1	-	APJI01	42	4933	4788	11/20/13	4/9/17	Contig	FDA	SAMN02952945	GCA_000497575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/575/GCA_000497575.1_OHSU_S-C1	24155888	OHSU_II-C1
Alteromonas sp. ALT199	1298865	PRJNA190838	190838	Proteobacteria	Gammaproteobacteria	4.63567	43.7	-	JFBK01	1	4004	3861	2/27/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02849407	GCA_000597705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/705/GCA_000597705.1_ASM59770v1	-	ALT199
Loktanella sp. 3ANDIMAR09	1225657	PRJNA292749	292749	Proteobacteria	Alphaproteobacteria	3.67829	62	-	LJAK01	34	3752	3658	10/29/15	4/16/17	Contig	Univesitat de les Illes Balears (UIB)	SAMN03988185	GCA_001420005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/005/GCA_001420005.1_ASM142000v1	-	3ANDIMAR09
Sulfurospirillum sp. SL2-2	2013514	PRJNA388856	388856	Proteobacteria	delta/epsilon subdivisions	2.87661	38.7	chromosome:NZ_CP021979.1/CP021979.1	-	1	2924	2699	6/22/17	6/24/17	Chromosome	Friedrich Schiller University Jena	SAMN07187793	GCA_002205395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/395/GCA_002205395.1_ASM220539v1	-	SL2-2
Thalassospira sp. MCCC 1A01148	501834	PRJNA305767	305767	Proteobacteria	Alphaproteobacteria	4.31016	54.7	-	LPVZ01	24	4013	3928	4/7/16	4/17/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN04332628	GCA_001613795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/795/GCA_001613795.1_ASM161379v1	-	MCCC 1A01148
Collinsella sp. An271	1965616	PRJNA377666	377666	Terrabacteria group	Actinobacteria	2.78234	64.3	-	NFJE01	39	2429	2319	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473702	GCA_002159695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/695/GCA_002159695.1_ASM215969v1	-	An271
Delftia sp. RIT313	1468410	PRJNA239290	239290	Proteobacteria	Betaproteobacteria	6.69836	66.9	-	JFYT01	122	6023	5826	4/14/14	4/9/17	Contig	Monash University Malaysia	SAMN02676628	GCA_000632165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/165/GCA_000632165.1_Willow_Endophyte_RIT313	24812212	RIT313
Coprococcus sp. CAG:782	1262863	PRJEB1005	206820	Terrabacteria group	Firmicutes	2.32672	41.9	-	CAYJ01	60	1975	1959	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138541	GCA_000433075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/075/GCA_000433075.1_MGS782	-	-
Escherichia coli K-12	83333	PRJNA271807	271807	Proteobacteria	Gammaproteobacteria	4.60454	50.8	chromosome:NZ_CP010439.1/CP010439.1	-	1	4761	4423	4/21/15	2/23/17	Complete Genome	New England Biolabs	SAMN03277613	GCA_000974465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/465/GCA_000974465.1_ASM97446v1	-	ER3440
Veillonella sp. DNF00869	1384081	PRJNA257378	257378	Terrabacteria group	Firmicutes	1.66429	39.3	-	LSDQ01	27	1488	1431	2/8/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN04324904	GCA_001553345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/345/GCA_001553345.1_ASM155334v1	-	DNF00869
Peptoniphilus sp. HMSC062D09	1739305	PRJNA299955	299955	Terrabacteria group	Firmicutes	1.883	34	-	LTGC01	70	1783	1675	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477619	GCA_001811425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/425/GCA_001811425.1_ASM181142v1	-	HMSC062D09
Escherichia coli K-12	83333	PRJNA271807	271807	Proteobacteria	Gammaproteobacteria	4.62116	50.8	chromosome:NZ_CP010440.1/CP010440.1	-	1	4771	4410	4/21/15	2/23/17	Complete Genome	New England Biolabs	SAMN03277619	GCA_000974505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/505/GCA_000974505.1_ASM97450v1	-	ER3476
Labrenzia sp. C1B10	1397530	PRJNA217943	217943	Proteobacteria	Alphaproteobacteria	6.83141	58.8	-	AXBY01	70	6277	6151	10/21/13	4/9/17	Contig	University of Illinois at Chicago	SAMN02345634	GCA_000475275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/275/GCA_000475275.1_De_Novo_assembly	24356826	C1B10
Tannerella sp. CAG:51	1262979	PRJEB910	206945	FCB group	Bacteroidetes/Chlorobi group	3.31885	38.5	-	CBHX01	133	2625	2586	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138758	GCA_000437475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/475/GCA_000437475.1_MGS51	-	-
Eggerthella sp. CAG:1427	1262874	PRJEB718	206628	Terrabacteria group	Actinobacteria	2.23077	45.4	-	CAXM01	46	1978	1937	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138471	GCA_000431675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/675/GCA_000431675.1_MGS1427	-	-
Anaerostipes sp. BG01	2025494	PRJNA397540	397540	Terrabacteria group	Firmicutes	3.3268	43.5	-	NQOG01	86	3506	3130	8/25/17	8/28/17	Contig	Kyung Hee University 	SAMN07460465	GCA_002270485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/270/485/GCA_002270485.1_ASM227048v1	-	BG01
Porphyromonas sp. HMSC077F02	1739529	PRJNA300180	300180	FCB group	Bacteroidetes/Chlorobi group	2.26626	47.3	-	LTSX01	85	1861	1783	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480444	GCA_001815465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/465/GCA_001815465.1_ASM181546v1	-	HMSC077F02
Neisseria sp. oral taxon 014 str. F0314	641149	PRJNA42547	42547	Proteobacteria	Betaproteobacteria	2.51576	52.8	-	ADEA01	11	2421	2264	2/26/10	4/17/17	Scaffold	Broad Institute	SAMN02463843	GCA_000090875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/090/875/GCA_000090875.1_ASM9087v1	-	F0314
Escherichia coli K-12	83333	PRJNA271807	271807	Proteobacteria	Gammaproteobacteria	4.60763	50.8	chromosome:NZ_CP010441.1/CP010441.1	-	1	4747	4414	4/21/15	2/23/17	Complete Genome	New England Biolabs	SAMN03277614	GCA_000974535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/535/GCA_000974535.1_ASM97453v1	-	ER3445
Alistipes sp. HGB5	908612	PRJNA54031	54031	FCB group	Bacteroidetes/Chlorobi group	3.46461	57.5	-	AENZ01	86	2987	2852	12/2/10	4/17/17	Contig	J. Craig Venter Institute	SAMN00116786	GCA_000183485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/485/GCA_000183485.2_ASM18348v1	-	HGB5
Olsenella sp. SIT9	1622075	PRJEB11504	300214	Terrabacteria group	Actinobacteria	1.81871	66.2	-	CZPU01	13	1626	1544	10/28/15	4/11/17	Scaffold	URMITE	SAMEA3635088	GCA_001457795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/795/GCA_001457795.1_Olsenella_massiliensis	-	SIT9
Propionibacterium sp. HGH0353	1203571	PRJNA169460	169460	Terrabacteria group	Actinobacteria	2.74129	63.3	-	ATFM01	2	2562	2384	6/21/13	4/17/17	Scaffold	Broad Institute	SAMN02596990	GCA_000413335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/335/GCA_000413335.1_Prop_sp_HGH0353_V1	-	HGH0353
Ralstonia sp. UNC404CL21Col	1380362	PRJNA213749	213749	Proteobacteria	Betaproteobacteria	5.08745	64.6	-	JIBE01	11	4724	4599	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743945	GCA_000620465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/465/GCA_000620465.1_ASM62046v1	-	UNC404CL21Col
Dorea sp. CAG:105	1262872	PRJEB681	206633	Terrabacteria group	Firmicutes	2.41287	41.5	-	CAWY01	86	2184	2159	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138548	GCA_000433215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/215/GCA_000433215.1_MGS105	-	-
Acidaminococcus sp. CAG:917	1262688	PRJEB1034	206937	Terrabacteria group	Firmicutes	1.53362	42.5	-	CBJM01	28	1315	1276	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138762	GCA_000437555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/555/GCA_000437555.1_MGS917	-	-
Dermacoccus sp. UBA1591	1946405	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.97742	68.1	-	DCNR01	126	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451710	GCA_002322065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/065/GCA_002322065.1_ASM232206v1	28894102	-
Escherichia coli K-12	83333	PRJNA271807	271807	Proteobacteria	Gammaproteobacteria	4.66043	50.8	chromosome:NZ_CP010442.1/CP010442.1	-	1	4806	4467	4/21/15	2/23/17	Complete Genome	New England Biolabs	SAMN03277617	GCA_000974575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/575/GCA_000974575.1_ASM97457v1	-	ER3466
Parabacteroides sp. D13	563193	PRJNA38359	38359	FCB group	Bacteroidetes/Chlorobi group	5.37071	45.2	-	ACPW01	22	4617	4397	8/24/09	6/12/17	Scaffold	Broad Institute	SAMN02463739	GCA_000162275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/275/GCA_000162275.1_ASM16227v1	-	D13
Rhodobacter sp. AKP1	1247725	PRJNA178258	178258	Proteobacteria	Alphaproteobacteria	4.67577	68.9	-	ANFS01	102	4490	4335	12/5/12	5/19/17	Contig	Institute of Microbial Technology	SAMN02470005	GCA_000327525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/525/GCA_000327525.1_Rhodobacter_sp._AKP1	-	AKP1
Micromonospora sp. M42	457406	PRJNA38049	38049	Terrabacteria group	Actinobacteria	6.78064	72	-	ACQO01	14	6255	5376	2/12/14	4/17/17	Scaffold	Broad Institute	SAMN00013038	GCA_000568915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/915/GCA_000568915.1_ASM56891v1	-	M42
Escherichia coli K-12	83333	PRJNA271807	271807	Proteobacteria	Gammaproteobacteria	4.60686	50.8	chromosome:NZ_CP010443.1/CP010443.1	-	1	4745	4414	4/21/15	2/23/17	Complete Genome	New England Biolabs	SAMN03277615	GCA_000974825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/825/GCA_000974825.1_ASM97482v1	-	ER3446
Desulfovibrio sp. U5L	596152	PRJNA48323	48323	Proteobacteria	delta/epsilon subdivisions	4.59052	65.3	-	AHMC01	2	4050	3921	1/24/12	5/18/17	Scaffold	JGI	SAMN02261362	GCA_000245055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/055/GCA_000245055.1_ASM24505v1	-	U5L
Azospirillum sp. B4	95605	PRJDA69951	69951	Proteobacteria	Alphaproteobacteria	7.34536	67.5	-	BACU01	744	6506	5719	12/26/12	5/18/17	Scaffold	Kazusa DNA Research Institute	SAMD00036565	GCA_000333275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/275/GCA_000333275.1_ASM33327v1	-	B4
Fusobacterium sp. HMSC064B12	1739279	PRJNA299929	299929	Fusobacteria	Fusobacteriia	2.12174	26.9	-	LTGW01	56	2027	1910	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477591	GCA_001810995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/995/GCA_001810995.1_ASM181099v1	-	HMSC064B12
Prochlorococcus sp. RS01	1924286	PRJNA355059	355059	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.6577	31.4	chromosome:NZ_CP018345.1/CP018345.1	-	1	1842	1793	2/7/17	4/17/17	Chromosome	King Abdullah University of Science and Technology (KAUST)	SAMN06061932	GCA_001989435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/435/GCA_001989435.1_ASM198943v1	-	RS01
Shigella sp. FC569	1892897	PRJNA339982	339982	Proteobacteria	Gammaproteobacteria	4.64204	50.7	-	MECV01	422	5082	4154	9/8/16	3/5/17	Scaffold	Christian Medical College	SAMN05616423	GCA_001722155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/155/GCA_001722155.1_ASM172215v1	-	FC569
Coprobacillus sp. 8_2_54BFAA	469597	PRJNA39365	39365	Terrabacteria group	Firmicutes	3.79322	31.8	-	ACTG01	9	3671	3518	1/24/12	4/17/17	Scaffold	Broad Institute	SAMN02463766	GCA_000244855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/855/GCA_000244855.1_Coprob_sp_8_2_54BFAA_V1	-	8_2_54BFAA
Escherichia coli K-12	83333	PRJNA271807	271807	Proteobacteria	Gammaproteobacteria	4.60963	50.8	chromosome:NZ_CP010444.1/CP010444.1	-	1	4747	4415	4/21/15	2/23/17	Complete Genome	New England Biolabs	SAMN03277618	GCA_000974865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/865/GCA_000974865.1_ASM97486v1	-	ER3475
Thauera sp. 28	303682	PRJNA175409	175409	Proteobacteria	Betaproteobacteria	4.31426	65.9	-	AMXA01	118	3923	3777	11/6/12	6/20/17	Contig	Norwegian University of Life Sciences	SAMN02470719	GCA_000310145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/145/GCA_000310145.2_ASM31014v2	-	28
Escherichia coli K-12	83333	PRJNA271807	271807	Proteobacteria	Gammaproteobacteria	4.68209	50.8	chromosome:NZ_CP010445.1/CP010445.1	-	1	4823	4499	4/21/15	2/23/17	Complete Genome	New England Biolabs	SAMN03277612	GCA_000974885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/885/GCA_000974885.1_ASM97488v1	-	ER3435
Bacteroides sp. 4_3_47FAA	457394	PRJNA32443	32443	FCB group	Bacteroidetes/Chlorobi group	5.44292	42.7	-	ACDR02	39	4897	4491	2/18/09	5/18/17	Scaffold	Broad Institute	SAMN02463694	GCA_000158515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/515/GCA_000158515.2_Bacteroides_sp_4_3_47FAA_V2	-	4_3_47FAA
Thioalkalivibrio sp. ALJ4	1240558	PRJNA176447	176447	Proteobacteria	Gammaproteobacteria	2.98236	65.7	-	ARHX01	8	2863	2756	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441346	GCA_000377225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/225/GCA_000377225.1_ASM37722v1	-	ALJ4
Ruminococcus sp. Marseille-P328	1816688	PRJEB13958	321277	Terrabacteria group	Firmicutes	4.45331	42.9	-	FLKC01	19	-	-	5/12/16	5/12/16	Scaffold	URMITE	SAMEA3982511	GCA_900086605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/605/GCA_900086605.1_PRJEB13958	-	Marseille-P328
Escherichia coli K-12	83333	PRJEB7832	273542	Proteobacteria	Gammaproteobacteria	4.63813	50.8	chromosome I:NZ_LN832404.1/LN832404.1	-	1	4773	4454	4/2/15	2/23/17	Complete Genome	UNIVERSITY OF EXETER	SAMEA3143339	GCA_000981485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/485/GCA_000981485.1_EcoliK12AG100	-	K-12 substr. AG100
Escherichia coli	562	PRJNA272570	272570	Proteobacteria	Gammaproteobacteria	4.52812	50.8	chromosome:NZ_CP010816.1/CP010816.1	-	1	4656	4300	2/5/15	2/25/17	Complete Genome	KRIBB	SAMN03301757	GCA_000833145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/145/GCA_000833145.1_ASM83314v1	-	BL21 (TaKaRa)
Candidatus Pelagibacter sp. HIMB1321	1388755	PRJEB20426	382912	Proteobacteria	Alphaproteobacteria	1.32075	29	chromosome I:NZ_LT840186.1/LT840186.1	-	1	1411	1370	4/19/17	4/22/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN02744631	GCA_900177485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/485/GCA_900177485.1_IMG-taxon_2547132513_annotated_assembly	-	HIMB1321
Albidiferax sp. OV413	1855285	PRJEB16268	348868	Proteobacteria	Betaproteobacteria	5.73627	63.3	-	FNJA01	23	5263	5151	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216303	GCA_900104385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/385/GCA_900104385.1_IMG-taxon_2615840603_annotated_assembly	-	OV413
Stenotrophomonas sp. SKA14	391601	PRJNA19369	19369	Proteobacteria	Gammaproteobacteria	5.02045	66.3	-	ACDV01	3	4636	4507	12/31/08	6/15/17	Scaffold	Moore Foundation	SAMN02436221	GCA_000158575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/575/GCA_000158575.1_ASM15857v1	-	SKA14
Pseudovibrio sp. Ad46	989432	PRJNA298121	298121	Proteobacteria	Alphaproteobacteria	6.12406	51.3	-	LMCG01	85	5510	5341	4/19/16	4/17/17	Contig	University College Cork	SAMN04147121	GCA_001623065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/065/GCA_001623065.1_ASM162306v1	27065959	Ad46
Pedobacter sp. R20-19	1270196	PRJNA235622	235622	FCB group	Bacteroidetes/Chlorobi group	5.00652	37.1	-	JCKI01	15	4280	4182	6/16/14	4/11/17	Contig	GCAT Seek	SAMN02594495	GCA_000708265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/265/GCA_000708265.2_Genome_assembly_for_Pedobacter_sp._R20-19	-	R20-19
Limnobacter sp. UBA1615	1946757	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	3.06598	52.2	-	DCMT01	299	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454489	GCA_002321545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/545/GCA_002321545.1_ASM232154v1	28894102	-
Algoriphagus sp. UBA3586	1945999	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.33779	39.4	-	DFMT01	50	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452545	GCA_002376385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/385/GCA_002376385.1_ASM237638v1	28894102	-
Carnobacterium sp. AT7	333990	PRJNA19299	19299	Terrabacteria group	Firmicutes	2.44212	35.3	-	ABHH01	69	2410	2226	11/9/07	4/17/17	Contig	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436145	GCA_000171855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/855/GCA_000171855.1_ASM17185v1	-	AT7
Brevundimonas sp. BAL3	391600	PRJNA19287	19287	Proteobacteria	Alphaproteobacteria	3.64607	67.3	-	ABRU01	6	3553	3427	7/8/08	4/17/17	Scaffold	The Gordon and Betty Moore Foundation Microbial Genome Sequencing project	SAMN02436274	GCA_000155575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/575/GCA_000155575.1_ASM15557v1	-	BAL3
Escherichia coli	562	PRJNA273434	273434	Proteobacteria	Gammaproteobacteria	4.55751	50.8	chromosome:NZ_CP010585.1/CP010585.1	-	1	4697	4339	1/29/15	2/25/17	Complete Genome	Stockholm University	SAMN03292179	GCA_000830035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/035/GCA_000830035.1_ASM83003v1	-	C41(DE3)
Escherichia coli str. K-12 substr. MG1655	511145	PRJNA237120	237120	Proteobacteria	Gammaproteobacteria	4.63683	50.8	chromosome:NZ_CP009685.1/CP009685.1	-	1	4782	4454	12/15/14	2/23/17	Complete Genome	Pacific Biosciences	SAMN02743420	GCA_000801205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/205/GCA_000801205.1_ASM80120v1	-	K-12 substr. MG1655
Beggiatoa sp. 4572_84	1972449	PRJNA362212	362212	Proteobacteria	Gammaproteobacteria	8.45174	42.8	-	NBMI01	406	6389	6041	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06638407	GCA_002085445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/445/GCA_002085445.1_ASM208544v1	-	-
Alcanivorax sp. 43B_GOM-46m	1380387	PRJNA213775	213775	Proteobacteria	Gammaproteobacteria	4.74386	61.4	-	JADM01	49	4383	4251	1/10/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02584985	GCA_000518385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/385/GCA_000518385.1_ASM51838v1	-	43B_GOM-46m
Eubacterium sp. 3_1_31	457402	PRJNA39375	39375	Terrabacteria group	Firmicutes	3.57145	37.9	-	AKCD01	6	3347	3219	6/15/12	4/7/17	Contig	Broad Institute	SAMN02463770	GCA_000273585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/585/GCA_000273585.1_PB_Euba_sp_3_1_31_V1	22829535	3_1_31
Anaeromyxobacter sp. RBG_16_69_14	1797238	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	5.63848	68.9	-	MEMX01	157	5037	4291	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313698	GCA_001768075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/075/GCA_001768075.1_ASM176807v1	27774985	-
Brevibacillus sp. SKDU10	1247872	PRJNA312057	312057	Terrabacteria group	Firmicutes	5.04704	41.4	-	LSSO01	218	4548	4221	5/16/16	4/12/17	Contig	CSIR-Institute of Microbial Technology	SAMN04492862	GCA_001645205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/205/GCA_001645205.1_ASM164520v1	-	SKDU10
Geobacter sp. OR-1	1266765	PRJDB2901	269521	Proteobacteria	delta/epsilon subdivisions	4.55427	54.2	-	BAZF01	63	4156	3921	12/5/14	4/10/17	Contig	Chiba University	SAMD00017486	GCA_000813145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/145/GCA_000813145.1_ASM81314v1	"2,366,862,125,635,010"	OR-1
Escherichia coli K-12	83333	PRJNA263793	263793	Proteobacteria	Gammaproteobacteria	4.55866	50.8	chromosome:NZ_CP009789.1/CP009789.1	-	1	4701	4361	12/11/14	2/23/17	Complete Genome	New England Biolabs	SAMN03107000	GCA_000800765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/765/GCA_000800765.1_ASM80076v1	26010885	ER3413
Caulobacter sp. Root343	1736520	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	5.35787	68.1	-	LMDF01	12	4913	4789	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155789	GCA_001425745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/745/GCA_001425745.1_Root343	26633631	Root343
Dehalococcoides sp. JdFR-54	1935047	PRJNA269163	269163	Terrabacteria group	Chloroflexi	1.6913	59.7	-	MTNP01	67	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226371	GCA_002011475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/475/GCA_002011475.1_ASM201147v1	28350381	-
Psychromonas sp. PRT-SC03	1527299	PRJNA257345	257345	Proteobacteria	Gammaproteobacteria	0.906655	37.1	-	JPUQ01	210	882	817	10/16/15	10/16/15	Contig	"Scripps Institution of Oceanography, UC San Diego"	SAMN02941852	GCA_001321825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/825/GCA_001321825.1_ASM132182v1	-	-
Escherichia coli ER2796	1245474	PRJNA263007	263007	Proteobacteria	Gammaproteobacteria	4.55866	50.8	chromosome:NZ_CP009644.1/CP009644.1	-	1	4702	4363	12/9/14	2/23/17	Complete Genome	New England Biolabs	SAMN03093203	GCA_000800215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/215/GCA_000800215.1_ASM80021v1	26010885	ER2796
Escherichia coli	562	PRJEB6354	262882	Proteobacteria	Gammaproteobacteria	4.58562	50.8	chromosome 1:NZ_LM995446.1/LM995446.1	-	1	4721	4401	9/23/14	2/23/17	Complete Genome	Austrian Centre of Industrial Biotechnology	SAMEA2547783	GCA_000952955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/955/GCA_000952955.1_EcRV308Chr	-	K-12 substr. RV308
Escherichia coli	562	PRJEB6353	262881	Proteobacteria	Gammaproteobacteria	4.58486	50.8	chromosome 1:NZ_LM993812.1/LM993812.1	-	1	4721	4398	9/23/14	2/23/17	Complete Genome	Austrian Centre of Industrial Biotechnology	SAMEA2547782	GCA_000953515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/515/GCA_000953515.1_EcHMS174Chr	-	K-12 substr. HMS174
Roseobacter sp. SK209-2-6	388739	PRJNA18997	18997	Proteobacteria	Alphaproteobacteria	4.55583	57	-	AAYC01	29	4384	4215	3/7/07	5/19/17	Contig	J. Craig Venter Institute	SAMN02436125	GCA_000169455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/455/GCA_000169455.1_ASM16945v1	-	SK209-2-6
Marinomonas sp. QM202	1902503	PRJNA386639	386639	Proteobacteria	Gammaproteobacteria	3.17002	41.3	-	NHNK01	68	2968	2874	6/6/17	6/8/17	Contig	Shandong University at Weihai	SAMN07125512	GCA_002173415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/415/GCA_002173415.1_ASM217341v1	-	QM202
Roseovarius sp. A-2	1570360	PRJDB5044	335882	Proteobacteria	Alphaproteobacteria	4.58458	62.8	-	BDIY01	126	4550	4312	2/28/17	3/28/17	Contig	Chiba University	SAMD00059317	GCA_002072155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/155/GCA_002072155.1_ASM207215v1	-	A-2
Photobacterium sp. CECT 9190	2006084	PRJEB19609	381187	Proteobacteria	Gammaproteobacteria	4.38054	39.8	-	FYAK01	55	3944	3741	6/6/17	6/12/17	Scaffold	UVEG	SAMEA104113108	GCA_900185615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/615/GCA_900185615.1_P.malacitana_CECT9190T_SPAdes_Prokka_EMBL	-	CECT 9190
Marinobacter sp. es.042	1761794	PRJEB21432	391640	Proteobacteria	Gammaproteobacteria	3.93624	57.2	chromosome I:NZ_LT897781.1/LT897781.1	-	1	3611	3524	6/23/17	6/28/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04487880	GCA_900188315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/315/GCA_900188315.1_IMG-taxon_2609459767_annotated_assembly	-	ES.042
Polaribacter sp. SA4-10	754397	PRJNA357126	357126	FCB group	Bacteroidetes/Chlorobi group	3.43586	30.2	chromosome:NZ_CP019331.1/CP019331.1	-	1	3021	2926	6/2/17	6/5/17	Chromosome	"Atmosphere and Ocean Research Institute, The University of Tokyo"	SAMN06133347	GCA_002163835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/835/GCA_002163835.1_ASM216383v1	-	SA4-10
Sulfitobacter sp. 20_GPM-1509m	1380367	PRJNA213755	213755	Proteobacteria	Alphaproteobacteria	4.74041	61.7	-	JIBC01	23	4585	4475	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743952	GCA_000620505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/505/GCA_000620505.1_ASM62050v1	-	20_GPM-1509m
Erythrobacter sp. SD-21	161528	PRJNA19305	19305	Proteobacteria	Alphaproteobacteria	2.97087	62.9	-	ABCG01	19	2922	2832	6/14/07	4/17/17	Contig	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436098	GCA_000181515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/181/515/GCA_000181515.1_ASM18151v1	-	SD-21
Epulopiscium sp. SCG-C07WGA-EpuloA2	1712378	PRJNA294498	294498	Terrabacteria group	Firmicutes	2.48425	30.4	-	LJHE01	89	2078	1973	2/2/17	2/2/17	Contig	King Abdullah University of Science and Technology (KAUST)	SAMN04038460	GCA_001983555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/555/GCA_001983555.1_ASM198355v1	-	-
Nocardioides sp. J54	935866	PRJNA202356	202356	Terrabacteria group	Actinobacteria	4.75465	72.3	-	JAER01	80	4514	4356	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02584950	GCA_000519005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/005/GCA_000519005.1_ASM51900v1	-	J54
Paracoccus sp. N5	1101189	PRJNA160043	160043	Proteobacteria	Alphaproteobacteria	4.35454	67.7	-	AQUO01	3	4202	4031	4/19/13	5/19/17	Contig	JGI	SAMN02261258	GCA_000371965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/965/GCA_000371965.1_ASM37196v1	-	N5
Escherichia coli BW25113	679895	PRJNA257976	257976	Proteobacteria	Gammaproteobacteria	4.63147	50.8	chromosome:NZ_CP009273.1/CP009273.1	-	1	4774	4463	9/9/14	2/23/17	Complete Genome	Universite de Sherbrooke	SAMN03013572	GCA_000750555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/555/GCA_000750555.1_ASM75055v1	25323716	K-12 substr. BW25113
Amycolatopsis sp. AU-G6	1854586	PRJNA392858	392858	Terrabacteria group	Actinobacteria	6.34275	70.3	-	NKYE01	64	5671	5458	8/22/17	8/24/17	Contig	"Institute of Microbiology, CAS"	SAMN07313103	GCA_002262875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/875/GCA_002262875.1_ASM226287v1	-	AU-G6
Herbaspirillum sp. CF444	1144319	PRJNA83061	83061	Proteobacteria	Betaproteobacteria	5.59473	59.7	-	AKJW01	125	4997	4846	7/27/12	5/18/17	Contig	Oak Ridge National Lab	SAMN00839627	GCA_000282135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/135/GCA_000282135.1_Herbaspirillum.strCF444_v1.0	23045501	CF444
Methylobacterium sp. MB200	648885	PRJNA176267	176267	Proteobacteria	Alphaproteobacteria	5.7664	68.9	-	AMXU01	30	5367	5075	1/25/13	5/19/17	Scaffold	"College of Life Science and Technology; State Key Laboratory for Conservation and Utilization of Agricultural Bioresources in the Subtropics, Guangxi University"	SAMN02471138	GCA_000333655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/655/GCA_000333655.1_Methylobacterium_sp._MB200_genome_sequence_1.0	-	MB200
Citrobacter sp. KTE30	1169319	PRJNA157557	157557	Proteobacteria	Gammaproteobacteria	4.90267	51.9	-	ASQJ01	4	4827	4590	5/16/13	4/8/17	Scaffold	Broad Institute	SAMN00847637	GCA_000398825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/825/GCA_000398825.1_Esch_coli_KTE30_V1	-	KTE30
Fischerella sp. PCC 9431	1173023	PRJNA158821	158821	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.16743	40.2	-	ALVX01	8	6083	5757	8/15/13	4/8/17	Scaffold	JGI	SAMN02441755	GCA_000447295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/295/GCA_000447295.1_ASM44729v1	-	PCC 9431
Anabaena sp. 4-3	1811979	PRJNA314519	314519	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.60377	41.4	-	LUHJ01	76	4730	4513	3/25/16	4/12/17	Scaffold	University of Texas at Austin	SAMN04536954	GCA_001597745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/745/GCA_001597745.1_ASM159774v1	-	3-Apr
Geitlerinema sp. FC II	2028210	PRJNA399071	399071	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.78815	51.4	-	NRIU01	2805	-	-	9/6/17	9/6/17	Scaffold	Reliance Industries Limited	SAMN07522602	GCA_002286845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/845/GCA_002286845.1_ASM228684v1	-	FC II
Pseudanabaena sp. SR411	1980935	PRJNA383344	383344	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.78003	42.2	-	NDHW01	266	5287	4905	8/15/17	8/17/17	Contig	Bucknell University	SAMN06761459	GCA_002251945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/945/GCA_002251945.1_ASM225194v1	-	SR411
Arcobacter sp. LA11	1898176	PRJDB5254	352959	Proteobacteria	delta/epsilon subdivisions	3.09898	27.9	-	BDIR01	53	3044	2961	11/8/16	4/16/17	Contig	"Graduate School of Bioresources, Mie University"	SAMD00065689	GCA_001895145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/145/GCA_001895145.1_ASM189514v1	-	LA11
Methanobrevibacter sp. A54	1860156	PRJNA324744	324744	Euryarchaeota	Methanobacteria	1.71224	31.3	-	MAIE01	112	1710	1616	9/16/16	4/13/17	Contig	"Australian Centre for Ecogenomics, The University of Queensland"	SAMN05231871	GCA_001729455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/455/GCA_001729455.1_ASM172945v1	-	A54
Methylosinus sp. 3S-1	1849840	PRJNA321671	321671	Proteobacteria	Alphaproteobacteria	4.76246	66	-	LXWX01	159	4457	4198	6/22/16	4/13/17	Contig	Tohoku University	SAMN05001384	GCA_001675455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/455/GCA_001675455.1_ASM167545v1	-	3S-1
Treponema endosymbiont of Eucomonympha sp.	1580831	PRJDB3365	286024	Spirochaetes	Spirochaetia	2.42206	55.1	-	BBPY01	946	2271	1939	6/5/15	5/22/17	Contig	"Microbe Division (RIKEN BRC JCM), RIKEN BioResource Center"	SAMD00023472	GCA_001028585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/585/GCA_001028585.1_ASM102858v1	25979941	E12
Novosphingobium sp. Fuku2-ISO-50	1739114	PRJNA299316	299316	Proteobacteria	Alphaproteobacteria	4.42286	63.9	-	LLZR01	42	3996	3871	1/20/16	4/11/17	Scaffold	Bielefeld University	SAMN04193359	GCA_001519055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/055/GCA_001519055.1_ASM151905v1	-	Fuku2-ISO-50
Methylophilus sp. 5	1112274	PRJNA83645	83645	Proteobacteria	Betaproteobacteria	3.03302	50.2	-	AZXN01	1	2886	2789	1/3/14	6/20/17	Scaffold	JGI	SAMN02597270	GCA_000515275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/275/GCA_000515275.1_ASM51527v1	-	5
Deinococcus sp. YIM 77859	1540221	PRJNA245593	245593	Terrabacteria group	Deinococcus-Thermus	3.16952	67.5	-	JQNI01	4	3103	2966	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02745160	GCA_000745175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/175/GCA_000745175.1_ASM74517v1	-	YIM 77859
Methylomonas sp. LW13	107637	PRJNA225845	225845	Proteobacteria	Gammaproteobacteria	5.2008	51.8	-	JNLB01	42	4803	4624	6/11/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02841227	GCA_000702925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/925/GCA_000702925.1_ASM70292v1	25767239	LW13
Lactobacillus sp. ASF360	97137	PRJNA176000	176000	Terrabacteria group	Firmicutes	2.01272	36.7	-	AQFR01	28	1922	1662	4/8/13	4/17/17	Scaffold	Broad Institute	SAMN01731004	GCA_000364185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/185/GCA_000364185.1_Lact_bact_ASF360_V1	24723722	ASF360
Enterococcus sp. HMSC05C03	1581114	PRJNA269883	269883	Terrabacteria group	Firmicutes	4.42701	39	-	LWOL01	178	4375	4223	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03433346	GCA_001807185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/185/GCA_001807185.1_ASM180718v1	-	HMSC05C03
Prevotella sp. C561	563031	PRJNA41971	41971	FCB group	Bacteroidetes/Chlorobi group	4.03115	41.9	-	ADCT01	76	3278	2887	8/29/11	4/17/17	Scaffold	Broad Institute	SAMN02463828	GCA_000224595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/595/GCA_000224595.1_Prevotella_sp_C561_V1	-	C561
Pantoea sp. aB	517433	PRJNA42823	42823	Proteobacteria	Gammaproteobacteria	4.80531	54.3	-	AEDL01	33	4543	4371	8/20/10	5/19/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN00016812	GCA_000179655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/655/GCA_000179655.1_ASM17965v1	-	aB
Gillisia sp. Hel_I_29	1249975	PRJNA217202	217202	FCB group	Bacteroidetes/Chlorobi group	3.9593	34.3	-	JQLP01	9	3554	3436	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02745561	GCA_000744275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/275/GCA_000744275.1_ASM74427v1	-	Hel_I_29
Azoarcus sp. PA01	1637998	PRJNA279928	279928	Proteobacteria	Betaproteobacteria	3.90824	66.1	-	LARU01	4	3674	3456	8/26/15	4/11/17	Contig	University of Konstanz	SAMN03452271	GCA_001274695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/274/695/GCA_001274695.1_ASM127469v1	26516406	PA01
Thermoanaerobacter sp. YS13	1511746	PRJNA253061	253061	Terrabacteria group	Firmicutes	2.70876	34	-	JOOI01	4	2777	2565	12/22/14	4/13/17	Contig	University of Manitoba	SAMN02866349	GCA_000806225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/225/GCA_000806225.2_ASM80622v2	26044430	YS13
Thermus sp. JCM 17653	1293589	PRJDB795	243707	Terrabacteria group	Deinococcus-Thermus	2.22036	68	-	BBBN01	616	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000458	GCA_001311585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/585/GCA_001311585.1_ASM131158v1	-	JCM 17653
Sulfurovum sp. SCGC AAA036-F05	1218800	PRJNA169696	169696	Proteobacteria	delta/epsilon subdivisions	0.611024	33.6	-	AQWF01	107	-	-	4/20/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441057	GCA_000375865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/865/GCA_000375865.1_ASM37586v1	-	SCGC AAA036-F5
Polaromonas sp. CG9_12	1504672	PRJEB6335	254135	Proteobacteria	Betaproteobacteria	4.90454	61.4	-	CCJP01	7	4579	4170	7/31/14	4/9/17	Contig	NATIONALCENTERFORGENOMERESOURCES	SAMEA2591371	GCA_000751355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/355/GCA_000751355.1_Polaromonas_sp_strain_CG9_12	25477404	-
Escherichia coli	562	PRJNA238952	238952	Proteobacteria	Gammaproteobacteria	5.09044	50.8	chromosome:NZ_CP007394.1/CP007394.1	-	1	5175	4640	3/19/14	2/23/17	Complete Genome	University of Antwerpen	SAMN02666698	GCA_000599705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/705/GCA_000599705.1_ASM59970v1	24723707	ST2747
Nocardiopsis sp. RV163	1661388	PRJNA284660	284660	Terrabacteria group	Actinobacteria	6.11053	72.4	-	LEKI01	348	5408	5006	6/18/15	4/10/17	Scaffold	University of Wuerzburg	SAMN03729480	GCA_001029525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/525/GCA_001029525.1_ASM102952v1	26430030	RV163
Escherichia coli str. K-12 substr. MC4100	1403831	PRJEB4621	222619	Proteobacteria	Gammaproteobacteria	4.52725	50.8	chromosome I:NZ_HG738867.1/HG738867.1	-	1	4654	4341	11/5/13	2/22/17	Complete Genome	EVOECOGENKIEL	SAMEA3138816	GCA_000499485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/485/GCA_000499485.1_MYMC4100	24850796	K-12 substr. MC4100
synthetic Escherichia coli C321.deltaA	1385755	PRJNA215084	215084	Proteobacteria	Gammaproteobacteria	4.64355	50.8	chromosome:CP006698.1	-	1	4508	4103	10/18/13	1/21/15	Complete Genome	"Church Lab, Department of Genetics, Harvard Medical School"	SAMN02603139	GCA_000474035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/035/GCA_000474035.1_ASM47403v1	-	C321.deltaA
Bifidobacterium sp. 7101	1394175	PRJNA217456	217456	Terrabacteria group	Actinobacteria	2.11708	60.1	-	AWUN01	16	1674	1607	11/25/13	4/9/17	Contig	University of Arizona	SAMN02338863	GCA_000499285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/285/GCA_000499285.1_bifidobacterium_strain7101	-	7101
Treponema primitia ZAS-2	545694	PRJNA30189	30189	Spirochaetes	Spirochaetia	4.05987	50.8	chromosome:NC_015578.1/CP001843.1	-	1	3558	3450	5/23/11	4/7/17	Complete Genome	J. Craig Venter Institute	SAMN02603452	GCA_000214375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/375/GCA_000214375.1_ASM21437v1	21326336	ZAS-2
Escherichia coli DH1	536056	PRJDA52077	52077	Proteobacteria	Gammaproteobacteria	4.62143	50.8	chromosome:NC_017638.1/AP012030.1	-	1	4749	4425	12/17/10	2/22/17	Complete Genome	"Symbiotic Network Design Laboratory, Graduate School of Information Science and Technology, Osaka University"	SAMD00060976	GCA_000270105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/105/GCA_000270105.1_ASM27010v1	21611185	DH1
Escherichia coli DH1	536056	PRJNA30031	30031	Proteobacteria	Gammaproteobacteria	4.63071	50.8	chromosome:NC_017625.1/CP001637.1	-	1	4764	4441	10/5/09	2/22/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598470	GCA_000023365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/365/GCA_000023365.1_ASM2336v1	-	DH1
Escherichia coli B str. REL606	413997	PRJNA18281	18281	Proteobacteria	Gammaproteobacteria	4.62981	50.8	chromosome:NC_012967.1/CP000819.1	-	1	4753	4401	7/15/09	2/22/17	Complete Genome	International E. coli B Consortium	SAMN02603421	GCA_000017985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/985/GCA_000017985.1_ASM1798v1	-	REL606
Nocardia sp. Root136	1736458	PRJNA297942	297942	Terrabacteria group	Actinobacteria	7.28286	67.3	-	LMFE01	14	6694	6521	11/2/15	4/17/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155727	GCA_001427185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/185/GCA_001427185.1_Root136	26633631	Root136
Leptospirillum sp. Group IV 'UBA BS'	1260983	PRJNA176861	176861	Nitrospirae	Nitrospira	1.52216	58.5	-	AURA01	296	1903	1879	8/19/13	1/8/14	Scaffold	University of California Berkeley	SAMN02471615	GCA_000496115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/115/GCA_000496115.1_Leptospirillum_group_IV_UBA_BS	23645189	-
Erwinia sp. 9145	1500895	PRJNA247913	247913	Proteobacteria	Gammaproteobacteria	4.2543	55.2	-	JQNE01	1	4053	3880	8/28/14	4/10/17	Contig	DOE Joint Genome Institute	SAMN02787015	GCA_000745075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/075/GCA_000745075.1_ASM74507v1	-	9145
Escherichia coli BL21(DE3)	469008	PRJNA20713	20713	Proteobacteria	Gammaproteobacteria	4.55895	50.8	chromosome:NC_012971.2/CP001509.3	-	1	4700	4339	7/15/09	2/22/17	Complete Genome	Korea Research Institute of Bioscience and Biotechnology	SAMN02603478	GCA_000022665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/665/GCA_000022665.2_ASM2266v1	19786035	BL21(DE3)
Escherichia sp. KTE11	1169331	PRJNA157581	157581	Proteobacteria	Gammaproteobacteria	4.52715	50.5	-	ANSR01	7	4494	4206	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00847649	GCA_000350705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/705/GCA_000350705.1_Esch_coli_KTE11_V1	-	KTE11
Escherichia coli 'BL21-Gold(DE3)pLysS AG'	866768	PRJNA30681	30681	Proteobacteria	Gammaproteobacteria	4.57094	50.8	chromosome:NC_012947.1/CP001665.1	-	1	4738	4368	7/9/09	2/22/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002656	GCA_000023665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/665/GCA_000023665.1_ASM2366v1	-	BL21-Gold(DE3)pLysS AG
Corynebacterium sp. KPL2004	1203632	PRJNA170372	170372	Terrabacteria group	Actinobacteria	2.57595	59.3	-	AXLN01	6	2432	2282	10/21/13	4/17/17	Scaffold	Broad Institute	SAMN02596994	GCA_000477875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/875/GCA_000477875.1_Cory_sp_KPL2004_V1	-	KPL2004
Staphylococcus sp. URHA0057	1380374	PRJNA213762	213762	Terrabacteria group	Firmicutes	2.54968	31.5	-	JHVS01	28	2496	2364	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02952998	GCA_000620265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/265/GCA_000620265.1_ASM62026v1	-	URHA0057
Escherichia coli BL21(DE3)	469008	PRJEA28965	28965	Proteobacteria	Gammaproteobacteria	4.55895	50.8	chromosome:NC_012892.2/AM946981.2	-	1	4700	4339	6/30/09	2/22/17	Complete Genome	Austrian Center for Biopharmaceutical Technology	SAMEA2272558	GCA_000009565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/565/GCA_000009565.2_ASM956v1	-	BL21(DE3)
Escherichia coli BW2952	595496	PRJNA33775	33775	Proteobacteria	Gammaproteobacteria	4.57816	50.8	chromosome:NC_012759.1/CP001396.1	-	1	4732	4409	6/4/09	2/22/17	Complete Genome	"TEDA School of Biological Sciences and Biotechnology, Nankai University"	SAMN02603900	GCA_000022345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/345/GCA_000022345.1_ASM2234v1	19376874	K-12 substr. BW2952
Leptolyngbya sp. PCC 7375	102129	PRJNA43137	43137	Terrabacteria group	Cyanobacteria/Melainabacteria group	9.42297	47.6	-	ALVN01	5	8176	7728	11/27/12	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02256520	GCA_000316115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/115/GCA_000316115.1_ASM31611v1	23277585	PCC 7375
Nitrosomonas sp. Nm33	133724	PRJEB16537	349853	Proteobacteria	Betaproteobacteria	3.23393	44.5	-	FNPJ01	171	3061	2758	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421755	GCA_900107265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/265/GCA_900107265.1_IMG-taxon_2675903042_annotated_assembly	-	Nm33
Ruegeria sp. 6PALISEP08	1225660	PRJNA290424	290424	Proteobacteria	Alphaproteobacteria	4.46321	56.8	-	LGXZ01	42	4360	4247	8/5/15	4/16/17	Contig	Univesitat de les Illes Balears (UIB)	SAMN03891582	GCA_001238295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/295/GCA_001238295.1_ASM123829v1	-	6PALISEP08
Escherichia coli IAI1	585034	PRJNA33373	33373	Proteobacteria	Gammaproteobacteria	4.70056	50.8	chromosome:NC_011741.1/CU928160.2	-	1	4786	4513	12/16/08	2/22/17	Complete Genome	Genoscope	SAMEA3138230	GCA_000026265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/265/GCA_000026265.1_ASM2626v1	-	IAI1
Escherichia coli str. K-12 substr. DH10B	316385	PRJNA20079	20079	Proteobacteria	Gammaproteobacteria	4.68614	50.8	chromosome:NC_010473.1/CP000948.1	-	1	4861	4504	3/14/08	4/20/17	Complete Genome	University of Wisconsin-Madison	SAMN02604262	GCA_000019425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/425/GCA_000019425.1_ASM1942v1	18245285	K-12 substr. DH10B
Clostridium sp. L2-50	411489	PRJNA18211	18211	Terrabacteria group	Firmicutes	2.95462	41.4	-	AAYW02	20	2658	2538	5/24/07	4/17/17	Scaffold	Washington University Genome Sequencing Center	SAMN02299417	GCA_000154245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/245/GCA_000154245.1_ASM15424v1	-	L2-50
Escherichia coli HS	331112	PRJNA13959	13959	Proteobacteria	Gammaproteobacteria	4.64354	50.8	chromosome:NC_009800.1/CP000802.1	-	1	4757	4407	9/10/07	2/22/17	Complete Genome	TIGR	SAMN02604037	GCA_000017765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/765/GCA_000017765.1_ASM1776v1	18676672	HS
Frankia sp. Thr	981426	PRJNA209994	209994	Terrabacteria group	Actinobacteria	5.30629	70	-	JENI01	169	4698	4286	3/31/14	4/16/17	Scaffold	University of New Hampshire	SAMN02639461	GCA_000611815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/815/GCA_000611815.2_ASM61181v2	24855310	Thr
Bacillus altitudinis	293387	PRJNA338659	338659	Terrabacteria group	Firmicutes	3.74726	41.1	-	MEDE01	54	3889	3740	12/9/16	4/16/17	Contig	Tennessee State University	SAMN05560546	GCA_001896335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/335/GCA_001896335.1_ASM189633v1	-	YNP4-TSU
Flavobacterium sp. Leaf359	1736351	PRJNA297956	297956	FCB group	Bacteroidetes/Chlorobi group	3.80138	38	-	LMPW01	16	3479	3327	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151741	GCA_001423985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/985/GCA_001423985.1_Leaf359	26633631	Leaf359
Klebsiella sp. 1_1_55	469608	PRJNA40049	40049	Proteobacteria	Gammaproteobacteria	5.45974	57.4	-	ACXA01	19	5380	5122	11/23/09	2/21/17	Scaffold	Broad Institute	SAMN02463808	GCA_000163075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/075/GCA_000163075.1_ASM16307v1	-	1_1_55
Escherichia coli str. K-12 substr. W3110	316407	PRJNA16351	16351	Proteobacteria	Gammaproteobacteria	4.64633	50.8	chromosome:NC_007779.1/AP009048.1	-	1	4793	4471	1/21/06	2/22/17	Complete Genome	Nara Institute of Science and Technology	SAMD00061081	GCA_000010245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/245/GCA_000010245.1_ASM1024v1	"319,453,273,224,358,000"	K-12 substr. W3110
Escherichia coli str. K-12 substr. MG1655	511145	PRJNA225	225	Proteobacteria	Gammaproteobacteria	4.64165	50.8	chromosome:NC_000913.3/U00096.3	-	1	4498	4140	10/13/98	8/8/16	Complete Genome	Univ. Wisconsin	SAMN02604091	GCA_000005845.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/005/845/GCA_000005845.2_ASM584v2	"92,785,031,639,729,300,000,000"	K-12 substr. MG1655
Lysinibacillus boronitolerans JCM 21713 = 10a = NBRC 103108	1294264	PRJDB822	243730	Terrabacteria group	Firmicutes	4.56376	37.7	-	BBCN01	108	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000545	GCA_001312025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/025/GCA_001312025.1_ASM131202v1	-	JCM 21713
Staphylococcus lentus	42858	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.71951	31.7	-	FMRW01	37	2679	2554	9/30/16	4/18/17	Contig	SC	SAMEA3109314	GCA_900098655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/655/GCA_900098655.1_15056_7_48	-	050AP
Thalassospira xiamenensis	220697	PRJNA305773	305773	Proteobacteria	Alphaproteobacteria	4.78621	54.7	-	LPXM01	72	4494	4361	4/8/16	4/12/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN04332634	GCA_001618195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/195/GCA_001618195.1_ASM161819v1	-	MCCC 1A03042
Bacillus siamensis	659243	PRJNA395369	395369	Terrabacteria group	Firmicutes	3.71832	46.4	-	NPCI01	67	3773	3631	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372710	GCA_002271775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/775/GCA_002271775.1_assembly-7551_v1	-	7551
Kosakonia radicincitans YD4	1544796	PRJNA260749	260749	Proteobacteria	Gammaproteobacteria	5.22686	54.3	-	JSFC01	1	4972	4758	2/18/15	4/10/17	Contig	Los Alamos National Laboratory	SAMN03025786	GCA_000877295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/295/GCA_000877295.1_GFC_25	25838492	YD4
Oribacterium sp. FC2011	1408311	PRJNA223049	223049	Terrabacteria group	Firmicutes	4.16676	42.2	-	JNJM01	67	3611	3408	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841158	GCA_000701645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/645/GCA_000701645.1_ASM70164v1	-	FC2011
Pseudomonas kilonensis	132476	PRJNA341585	341585	Proteobacteria	Gammaproteobacteria	6.48557	61	-	MRCR01	200	5897	5646	9/15/17	9/18/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN06014514	GCA_002303915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/915/GCA_002303915.1_ASM230391v1	-	ACN7
Leptolyngbya boryana PCC 6306	272134	PRJNA158729	158729	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.26245	47	-	ALVM01	5	6795	6529	4/3/13	4/8/17	Scaffold	JGI	SAMN02261250	GCA_000353285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/285/GCA_000353285.1_ASM35328v1	23277585	PCC 6306
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	4.70721	50.7999	chromosome:NZ_CP010226.1/CP010226.1; plasmid A:NZ_CP010227.1/CP010227.1	-	2	4917	4509	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252449	GCA_001901315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/315/GCA_001901315.1_ASM190131v1	-	S1
Paeniclostridium sordellii	1505	PRJEB8119	277645	Terrabacteria group	Firmicutes	3.44464	27.3	-	CEKV01	24	3350	3251	3/11/15	4/4/17	Contig	WTSI	SAMEA1572092	GCA_001372295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/295/GCA_001372295.1_R32921	-	R32921
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	4.85797	50.7976	chromosome:NZ_CP010178.1/CP010178.1; plasmid A:NZ_CP010179.1/CP010179.1	-	2	4959	4653	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252438	GCA_001901005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/005/GCA_001901005.1_ASM190100v1	-	H15
Paenibacillus durus	44251	PRJNA259665	259665	Terrabacteria group	Firmicutes	6.0535	50.7957	chromosome:NZ_CP009288.1/CP009288.1; plasmid unnamed:NZ_CP009289.1/CP009289.1	-	2	5453	5154	9/22/14	4/9/17	Complete Genome	Cornell University	SAMN03010338	GCA_000756615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/615/GCA_000756615.1_ASM75661v1	-	DSM 1735
Mycobacterium phlei DSM 43070	1335620	PRJNA203527	203527	Terrabacteria group	Actinobacteria	5.30406	69.4	-	ATHW01	117	5148	4917	3/8/16	4/12/17	Contig	Uppasala Univeristy & Jawaharlal Nehru University	SAMN04537320	GCA_001582005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/005/GCA_001582005.1_ASM158200v1	26941228	DSM 43070
Mycobacterium xenopi 3993	1299333	PRJNA191797	191797	Terrabacteria group	Actinobacteria	5.28768	65.8	-	JAOC01	37	10249	10192	1/27/14	2/22/14	Contig	Institute for Genome Sciences	SAMN02641613	GCA_000523715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/715/GCA_000523715.1_ASM52371v1	-	3993
Richelia intracellularis UBA3481	1962724	PRJNA348753	348753	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.21125	33.5	-	DFQU01	100	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452290	GCA_002377925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/925/GCA_002377925.1_ASM237792v1	28894102	-
Escherichia coli KO11FL	595495	PRJNA62299	62299	Proteobacteria	Gammaproteobacteria	5.02717	50.7949	chromosome:NC_017660.1/CP002970.1; plasmid pRK2:NC_017661.1/CP002971.1	-	2	5259	4811	4/6/12	2/22/17	Complete Genome	University of Florida	SAMN02604168	GCA_000258025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/025/GCA_000258025.1_ASM25802v1	22075923	KO11FL
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	4.67916	50.7938	chromosome:NZ_CP010167.1/CP010167.1; plasmid A:NZ_CP010168.1/CP010168.1	-	2	4797	4502	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252431	GCA_001900815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/815/GCA_001900815.1_ASM190081v1	-	H3
Mycobacterium haemophilum	29311	PRJNA284995	284995	Terrabacteria group	Actinobacteria	4.36907	63.9	-	LDPS01	69	4149	3844	6/8/15	4/10/17	Contig	UCSF	SAMN03734843	GCA_001021435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/435/GCA_001021435.1_ASM102143v1	-	UC2
Staphylococcus equorum subsp. equorum Mu2	1159488	PRJEA88899	88899	Terrabacteria group	Firmicutes	2.92717	32.8	-	CAJL01	30	2882	2741	6/19/12	3/30/17	Contig	Institut National de la Recherche Agronomique (INRA)	SAMEA2272469	GCA_000297455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/455/GCA_000297455.1_ASM29745v1	-	Mu2
Cutibacterium granulosum DSM 20700	1160719	PRJNA203685	203685	Terrabacteria group	Actinobacteria	3.52	64.2	-	JNBU01	172	2472	2367	8/8/16	8/8/16	Contig	Umea University	SAMN02798018	GCA_001700755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/755/GCA_001700755.1_ASM170075v1	-	DSM 20700
Cronobacter dublinensis subsp. lactaridi LMG 23825	1159496	PRJNA89101	89101	Proteobacteria	Gammaproteobacteria	4.45359	58.3	-	AJKX01	95	4255	3847	6/7/13	4/8/17	Contig	Cronobacter Genus Genome Sequencing Consortium	SAMN02952931	GCA_000409345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/345/GCA_000409345.1_Cdlac464_final_contigs	23724777	LMG 23825
Enterococcus villorum	112904	PRJNA342049	342049	Terrabacteria group	Firmicutes	3.05516	34.9	-	MJEB01	159	2904	2659	4/3/17	4/5/17	Contig	Lethbridge Research Centre	SAMN05735025	GCA_002077725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/725/GCA_002077725.1_ASM207772v1	28270110	F0321E 149
Enterococcus raffinosus	71452	PRJNA270385	270385	Terrabacteria group	Firmicutes	4.19358	39.4	-	JXLA01	137	4071	3909	11/25/16	4/16/17	Contig	Inner Mongolia Agricultural University	SAMN03267183	GCA_001886185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/185/GCA_001886185.1_ASM188618v1	-	DSM 5633
Phaeobacter inhibens DSM 16374	999548	PRJNA88111	88111	Proteobacteria	Alphaproteobacteria	4.1309	60	-	AXBB01	6	3916	3820	9/30/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440777	GCA_000473105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/105/GCA_000473105.1_ASM47310v1	-	DSM 16374
Bradyrhizobium elkanii WSM1741	1038859	PRJNA163007	163007	Proteobacteria	Alphaproteobacteria	7.95235	62.1	-	AXAU01	69	7520	7116	9/30/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441128	GCA_000472965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/965/GCA_000472965.1_ASM47296v1	-	WSM1741
Alcaligenes faecalis	511	PRJNA388846	388846	Proteobacteria	Betaproteobacteria	4.23698	55.9958	chromosome:NZ_CP021883.1/CP021883.1; plasmid pZD02:NZ_CP021884.1/CP021884.1	-	2	3582	3073	6/22/17	6/24/17	Chromosome	"Assam University, Silchar"	SAMN07187750	GCA_002205415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/415/GCA_002205415.1_ASM220541v1	-	BDB4
Amycolatopsis orientalis DSM 46075	1337958	PRJNA205410	205410	Terrabacteria group	Actinobacteria	9.44531	69.4	-	ASXH01	183	8884	8614	6/17/13	4/9/17	Contig	KRIBB	SAMN02204660	GCA_000411995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/995/GCA_000411995.1_AO46075_01	23908288	DSM 46075
Pseudomonas avellanae	46257	PRJNA274687	274687	Proteobacteria	Gammaproteobacteria	5.90179	58.8	-	JYHC01	455	5663	5051	3/2/15	4/10/17	Contig	INRA	SAMN03328959	GCA_000935825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/825/GCA_000935825.1_PAVEPAVT10-G1	25931602	PaVt10
Escherichia coli	562	PRJNA316786	316786	Proteobacteria	Gammaproteobacteria	5.14009	50.7938	chromosome:NZ_CP015069.1/CP015069.1; plasmid pEC743_1:NZ_CP015070.1/CP015070.1; plasmid pEC745_3:NZ_CP015072.1/CP015072.1; plasmid pEC745_4:NZ_CP015073.1/CP015073.1; plasmid pEC745_OXA48:NZ_CP015071.1/CP015071.1	-	5	5320	4931	4/11/16	2/25/17	Complete Genome	University of Oxford	SAMN04590096	GCA_001618325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/325/GCA_001618325.1_ASM161832v1	-	Ecol_743
Escherichia coli PCN061	1358422	PRJNA211971	211971	Proteobacteria	Gammaproteobacteria	4.90182	50.7931	chromosome:NZ_CP006636.1/CP006636.1; plasmid PCN061p1:NZ_CP006637.1/CP006637.1; plasmid PCN061p2:NZ_CP006638.1/CP006638.1; plasmid PCN061p3:NZ_CP006639.1/CP006639.1; plasmid PCN061p4:NZ_CP006640.1/CP006640.1; plasmid PCN061p5:NZ_CP006641.1/CP006641.1; plasmid PCN061p6:NZ_CP006642.1/CP006642.1	-	7	5178	4685	6/17/15	3/22/17	Complete Genome	Huazhong Agricultural University	SAMN03765122	GCA_001029125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/125/GCA_001029125.1_ASM102912v1	26391348	PCN061
Pseudomonas fuscovaginae SE-1	1316934	PRJNA196532	196532	Proteobacteria	Gammaproteobacteria	6.5258	63.1	-	AQOH01	407	5866	5508	4/15/13	5/19/17	Contig	Colorado State University	SAMN02469640	GCA_000364705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/705/GCA_000364705.1_Pseudomonas_fuscovaginae_SE-1	-	SE-1
Pseudomonas mandelii PD30	1419583	PRJNA227201	227201	Proteobacteria	Gammaproteobacteria	6.68584	59	-	AZQQ01	109	6180	5989	5/12/14	4/11/17	Contig	University of Guelph SES	SAMN02770242	GCA_000690555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/555/GCA_000690555.2_Pmandelii1.0	-	PD30
Pelosinus fermentans A11	1149860	PRJNA84237	84237	Terrabacteria group	Firmicutes	5.06349	39.8	-	AKVM01	134	4675	4527	6/20/12	5/19/17	Contig	ENIGMA	SAMN01057331	GCA_000271545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/545/GCA_000271545.1_Pelosinus.strA11_v1.0	22933770	A11
Bifidobacterium asteroides	1684	PRJNA257136	257136	Terrabacteria group	Actinobacteria	2.24522	59.5	-	JXJS01	7	1774	1699	3/31/15	4/10/17	Scaffold	Uppsala university	SAMN03271968	GCA_000970835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/835/GCA_000970835.1_ASM97083v1	-	Hma3
Acinetobacter parvus	134533	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	2.78104	41.7	-	BCME01	100	2784	2573	12/2/15	4/6/17	Contig	National Institute of Technology and Evaluation	SAMD00019890	GCA_001485085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/085/GCA_001485085.1_ASM148508v1	-	GTC 3704
Acinetobacter bereziniae	106648	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	4.86949	38	-	BBLJ01	132	4667	4494	8/28/14	4/2/17	Contig	National Institute of Technology and Evaluation	SAMD00018636	GCA_000753985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/985/GCA_000753985.1_ASM75398v1	-	KCTC 23199
Photorhabdus temperata	574560	PRJNA282823	282823	Proteobacteria	Gammaproteobacteria	5.00348	43.4	-	MBJU01	151	4413	3967	10/26/16	4/13/17	Contig	University of New Hampshire	SAMN03579668	GCA_001854735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/735/GCA_001854735.1_ASM185473v1	-	Hm
Campylobacter ureolyticus	827	PRJNA240200	240200	Proteobacteria	delta/epsilon subdivisions	1.6657	29	-	JFJK01	25	1706	1601	3/18/14	4/9/17	Contig	Cork Institute Of Technology	SAMN02673348	GCA_000597825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/825/GCA_000597825.1_CIT007v1	24723712	CIT007
Escherichia coli	562	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	5.06417	50.7925	chromosome:NZ_CP021683.1/CP021683.1; plasmid tig00002623:NZ_CP021680.1/CP021680.1; plasmid tig00003056:NZ_CP021681.1/CP021681.1; plasmid tig00003144:NZ_CP021682.1/CP021682.1; plasmid tig00008015:NZ_CP021684.1/CP021684.1	-	5	5257	4840	6/8/17	6/10/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04015003	GCA_002180135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/135/GCA_002180135.1_ASM218013v1	-	AR_0162
Vibrio ordalii FS-144	617134	PRJNA164843	164843	Proteobacteria	Gammaproteobacteria	4.02006	44.4	-	AJYU02	279	3645	3490	8/13/12	4/13/17	Scaffold	MIT	SAMN02470466	GCA_000287115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/115/GCA_000287115.2_ASM28711v2	22955834	FS-144
Geobacillus thermoleovorans B23	1406857	PRJDB1475	222505	Terrabacteria group	Firmicutes	3.35305	52.3	-	BATY01	209	3465	3220	10/9/13	4/9/17	Contig	Hokkaido University	SAMD00036769	GCA_000474195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/195/GCA_000474195.1_ASM47419v1	24233591	B23
Enterococcus columbae DSM 7374 = ATCC 51263	1121865	PRJNA270385	270385	Terrabacteria group	Firmicutes	2.49082	36.3	-	JXKI01	75	2331	2263	11/25/16	4/14/17	Contig	Inner Mongolia Agricultural University	SAMN03267165	GCA_001885835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/835/GCA_001885835.1_ASM188583v1	-	DSM 7374
Enterococcus avium	33945	PRJNA270385	270385	Terrabacteria group	Firmicutes	4.46605	38.9	-	JXKF01	181	4386	4289	11/25/16	4/16/17	Scaffold	Inner Mongolia Agricultural University	SAMN03267162	GCA_001885775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/775/GCA_001885775.1_ASM188577v1	-	DSM 20679
Sphingomonas melonis FR1	1090317	PRJNA84361	84361	Proteobacteria	Alphaproteobacteria	4.04797	67.1	-	ATTG01	5	3871	3753	7/9/13	4/8/17	Contig	JGI	SAMN02441600	GCA_000419565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/565/GCA_000419565.1_ASM41956v1	-	FR1
Enterococcus cecorum DSM 20682 = ATCC 43198	1121864	PRJNA191885	191885	Terrabacteria group	Firmicutes	2.40848	36.5	-	ASWI01	6	2441	2295	5/31/13	4/1/17	Contig	Broad Institute	SAMN02596960	GCA_000407565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/565/GCA_000407565.1_Ente_ceco_ATCC43198_V1	-	ATCC 43198
Moraxella osloensis	34062	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.59495	43.5	-	LZDO01	76	2350	2198	7/5/16	4/13/17	Scaffold	TAILORED-Treatment project	SAMN05214315	GCA_001679175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/175/GCA_001679175.1_ASM167917v1	-	CCUG 350
Vibrio cyclitrophicus	47951	PRJNA322702	322702	Proteobacteria	Gammaproteobacteria	5.04045	43.6	-	LZFT01	49	4490	4285	6/23/16	4/5/17	Contig	UC Davis	SAMN05172613	GCA_001675855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/855/GCA_001675855.1_ASM167585v1	-	UCD-FRSP16_18
Nocardia brasiliensis IFM 10847	1406859	PRJDB1474	251919	Terrabacteria group	Actinobacteria	9.15242	68.1	-	BAUA01	223	8397	7997	6/10/14	4/9/17	Contig	"Medical Mycology Research Center, Chiba University"	SAMD00036771	GCA_000710915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/915/GCA_000710915.1_ASM71091v1	24884595	IFM 10847
Pseudomonas fragi	296	PRJEB16494	349422	Proteobacteria	Gammaproteobacteria	5.0723	59.3	chromosome I:NZ_LT629783.1/LT629783.1	-	1	4666	4484	10/21/16	4/13/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216594	GCA_900105835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/835/GCA_900105835.1_IMG-taxon_2667527431_annotated_assembly	-	NRRL B-727
Gordonia terrae	2055	PRJNA238534	238534	Terrabacteria group	Actinobacteria	5.6733	67.8	-	JNXA01	108	5082	4936	7/1/14	4/9/17	Contig	University of Illinois	SAMN02645205	GCA_000716975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/975/GCA_000716975.1_ASM71697v1	-	NRRL B-16283
Megasphaera elsdenii	907	PRJNA246277	246277	Terrabacteria group	Firmicutes	2.41227	53.2	-	JRPS01	35	2206	2061	10/3/14	4/2/17	Contig	National Animal Disease Center	SAMN02999437	GCA_000763195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/195/GCA_000763195.1_ASM76319v1	-	24-50
Escherichia coli	562	PRJNA328481	328481	Proteobacteria	Gammaproteobacteria	4.73195	50.7889	chromosome:NZ_CP016404.1/CP016404.1; plasmid pSLy21:NZ_CP016405.1/CP016405.1	-	2	4880	4501	9/20/16	2/25/17	Complete Genome	Agricultural Research Service	SAMN05346848	GCA_001735705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/735/705/GCA_001735705.1_ASM173570v1	-	210221272
Lactobacillus mucosae LM1	1130798	PRJEB9398	284479	Terrabacteria group	Firmicutes	2.36967	46.2	-	CVQW01	12	2225	2074	5/21/15	4/3/17	Contig	URMITE	SAMEA3393057	GCA_001040725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/040/725/GCA_001040725.1_Lactobacillus_mucosae	-	Marseille
Cronobacter malonaticus LMG 23826	1159491	PRJNA89099	89099	Proteobacteria	Gammaproteobacteria	4.43404	56.8	-	AJKV01	127	4357	4081	6/7/13	4/1/17	Contig	Cronobacter Genus Genome Sequencing Consortium	SAMN02952929	GCA_000409305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/305/GCA_000409305.1_Cmal825_final_contigs	23724777	LMG 23826
Pseudoalteromonas luteoviolacea 2ta16	1353533	PRJNA210324	210324	Proteobacteria	Gammaproteobacteria	6.3644	42.3	-	AUSV01	137	5283	5132	11/5/13	4/2/17	Contig	"University of California, San Diego"	SAMN02232142	GCA_000495575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/575/GCA_000495575.1_Pl_2TA16.110909	-	2ta16
Cupriavidus basilensis B-8	1200775	PRJNA168985	168985	Proteobacteria	Betaproteobacteria	8.54679	64.9	-	AKXR01	1418	-	-	7/30/12	5/12/16	Scaffold	Central South university	SAMN02469429	GCA_000282815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/815/GCA_000282815.1_ASM28281v1	23298573	B-8
Escherichia coli	562	PRJNA262513	262513	Proteobacteria	Gammaproteobacteria	5.27307	50.7866	chromosome:NZ_CP010315.1/CP010315.1; plasmid pAPEC-O78-2:NZ_CP010317.1/CP010317.1; plasmid pAPEC-O78-3:NZ_CP010318.1/CP010318.1; plasmid pAPEC-O78-ColV:NZ_CP010316.1/CP010316.1	-	4	5470	5066	1/16/15	3/22/17	Complete Genome	Georg-August University of Goettingen	SAMN03083542	GCA_000819645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/645/GCA_000819645.1_ASM81964v1	25587010	789
Weissella confusa	1583	PRJEB19512	376306	Terrabacteria group	Firmicutes	2.25848	44.9	-	FUWE01	54	2113	1996	2/22/17	5/31/17	Contig	MICALIS	SAMEA95324668	GCA_900166935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/935/GCA_900166935.1_ASM90016693v1	-	AB3E41
Pseudomonas oleovorans subsp. oleovorans	1218129	PRJNA390074	390074	Proteobacteria	Gammaproteobacteria	4.85286	62.1	-	NIUB01	109	4676	4253	6/19/17	6/22/17	Contig	Georg-August-University Goettingen	SAMN07213127	GCA_002197815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/815/GCA_002197815.1_ASM219781v1	-	DSM 1045
Planktothrix agardhii NIVA-CYA 56/3	329545	PRJNA212883	212883	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.50778	39.5	-	AVFY01	20	4883	4604	9/6/13	4/9/17	Scaffold	University of Oslo	SAMN02261503	GCA_000464825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/825/GCA_000464825.1_NC56_3_1	23995927	NIVA-CYA 56/3
Pseudomonas monteilii NBRC 103158 = DSM 14164	1215110	PRJNA221052	221052	Proteobacteria	Gammaproteobacteria	6.30871	61.5	-	JHYV01	85	6062	5735	4/8/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02743984	GCA_000621245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/245/GCA_000621245.1_ASM62124v1	-	DSM 14164
Citrobacter werkmanii	67827	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.09202	52	-	NEYS01	39	4974	4720	6/9/17	6/12/17	Contig	JCVI	SAMN06812673	GCA_002185305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/305/GCA_002185305.1_ASM218530v1	-	ARLG-2975
Pseudoalteromonas rubra	43658	PRJNA288887	288887	Proteobacteria	Gammaproteobacteria	5.82415	47.8	-	LFZX01	460	5240	4180	7/29/15	4/10/17	Contig	University of Hawaii at Manoa	SAMN03839337	GCA_001188445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/445/GCA_001188445.1_ASM118844v1	-	OCN096
Pseudoalteromonas piscicida	43662	PRJNA242743	242743	Proteobacteria	Gammaproteobacteria	5.00021	43.4	-	JXXW01	126	4290	4153	4/1/15	4/10/17	Contig	Technical University of Denmark	SAMN03323931	GCA_000967555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/555/GCA_000967555.1_S2040	25879706	S2040
Mycoplasma canis UF31	1131452	PRJNA80795	80795	Terrabacteria group	Tenericutes	0.862059	27	-	AJFR01	5	685	614	4/17/12	3/30/17	Contig	University of Florida	SAMN02471766	GCA_000258945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/945/GCA_000258945.1_ASM25894v1	22815452	UF31
Streptomyces acidiscabies	42234	PRJNA322217	322217	Terrabacteria group	Actinobacteria	10.5502	70.6	-	LYDS01	983	9814	8650	1/10/17	3/15/17	Contig	University of Florida	SAMN05094139	GCA_001941275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/275/GCA_001941275.1_ASM194127v1	-	98-48
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	4.57786	50.7865	chromosome:NZ_CP010163.1/CP010163.1; plasmid A:NZ_CP010164.1/CP010164.1; plasmid B:NZ_CP010165.1/CP010165.1; plasmid C:NZ_CP010166.1/CP010166.1	-	4	4793	4299	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252430	GCA_001900795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/795/GCA_001900795.1_ASM190079v1	-	H2
Wolbachia pipientis	955	PRJNA254527	254527	Proteobacteria	Alphaproteobacteria	1.12666	35.2	-	JQAM01	43	1132	965	8/20/14	4/2/17	Contig	Vanderbilt University	SAMN02904630	GCA_000742435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/435/GCA_000742435.1_ASM74243v1	25165636	wRec
Janthinobacterium lividum	29581	PRJNA263254	263254	Proteobacteria	Betaproteobacteria	6.53561	62.4	-	JRRH01	114	5874	5683	11/14/14	4/2/17	Contig	Universidad de Santiago de Chile	SAMN03098031	GCA_000783415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/415/GCA_000783415.1_JanthLiv	26605004	MTR
Gordonia polyisoprenivorans	84595	PRJNA398074	398074	Terrabacteria group	Actinobacteria	6.18051	67	-	NQOE01	3	5529	5333	8/17/17	8/19/17	Contig	National Center for Genome Resources	SAMN07500910	GCA_002257745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/745/GCA_002257745.1_ASM225774v1	-	herm_1
Rhodococcus rhodochrous ATCC 21198	1429046	PRJNA229768	229768	Terrabacteria group	Actinobacteria	6.47755	70.2	-	AZHI01	161	5957	5692	1/13/14	4/2/17	Contig	Oak Ridge National Laboratory	SAMN02597428	GCA_000517665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/665/GCA_000517665.1_Rhodococcus_rhodochrous.strain_ATCC_21198_v1.0	24526639	ATCC 21198
Pseudomonas psychrotolerans	237610	PRJNA278254	278254	Proteobacteria	Gammaproteobacteria	5.41733	64.7	-	LDSQ01	103	4898	4745	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401419	GCA_001476415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/415/GCA_001476415.1_ASM147641v1	26793183	NS274
Bartonella birtlesii E11	1201035	PRJNA169001	169001	Proteobacteria	Alphaproteobacteria	1.84092	37.9	-	ALVG01	9	1632	1258	5/17/13	4/8/17	Scaffold	URMITE	SAMN02472047	GCA_000400165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/165/GCA_000400165.1_ASM40016v1	23611908	E11
Bartonella vinsonii subsp. berkhoffii str. Tweed	1094502	PRJNA73953	73953	Proteobacteria	Alphaproteobacteria	2.02413	39.6	-	AGWD01	9	1944	1639	4/10/13	4/8/17	Scaffold	Uppsala University	SAMN02472036	GCA_000385415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/415/GCA_000385415.1_BVtwMcIrM01	23555299	Tweed
Bartonella elizabethae	807	PRJNA287721	287721	Proteobacteria	Alphaproteobacteria	1.95742	38.3	-	LFMF01	76	1741	1607	3/7/17	3/10/17	Contig	University of Malaya	SAMN03784690	GCA_002022705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/705/GCA_002022705.1_ASM202270v1	26658020	BeUM
Rickettsia parkeri str. Tate's Hell	1359189	PRJNA212515	212515	Proteobacteria	Alphaproteobacteria	1.30038	32.4	-	LAOO01	1	1553	1275	3/27/15	4/10/17	Contig	IGS	SAMN02585092	GCA_000965145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/145/GCA_000965145.1_ASM96514v1	-	Tate's Hell
Xanthomonas arboricola pv. juglandis str. NCPPB 1447	1169848	PRJNA84273	84273	Proteobacteria	Gammaproteobacteria	5.02168	65.4	-	AJTL01	371	4532	3976	10/17/12	6/15/17	Contig	Chungbuk National University	SAMN02469596	GCA_000306055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/055/GCA_000306055.1_ASM30605v1	-	NCPPB 1447
Salinispora pacifica CNS863	1169194	PRJNA175152	175152	Terrabacteria group	Actinobacteria	5.43861	69.6	-	ARGJ01	70	5122	4783	4/19/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441365	GCA_000374725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/725/GCA_000374725.1_ASM37472v1	-	CNS863
Leptospira alexanderi	100053	PRJNA257144	257144	Spirochaetes	Spirochaetia	4.06269	40.3	-	JQGV01	368	4018	3563	3/2/17	3/4/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947769	GCA_002009825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/825/GCA_002009825.1_ASM200982v1	-	56640
Leptospira kirschneri serovar Grippotyphosa str. Moskva	1049945	PRJNA74073	74073	Spirochaetes	Spirochaetia	4.3358	35.9	-	AHMV02	31	3918	3575	1/24/12	5/18/17	Contig	J. Craig Venter Institute	SAMN02436371	GCA_000243855.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/855/GCA_000243855.3_LkirsMoskvav2.0	-	Moskva
Xanthomonas vasicola pv. vasculorum NCPPB 206	1094181	PRJNA73871	73871	Proteobacteria	Gammaproteobacteria	4.82594	63.3	-	AKBM01	177	4442	3900	7/17/12	5/19/17	Scaffold	University of Exeter	SAMN00991256	GCA_000278035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/035/GCA_000278035.1_Xvv206v1	24704974	NCPPB 206
Escherichia coli	562	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	5.29227	50.786	chromosome:NZ_CP010876.1/CP010876.1; plasmid pMNCRE44_1:NZ_CP010877.1/CP010877.1; plasmid pMNCRE44_2:NZ_CP010878.1/CP010878.1; plasmid pMNCRE44_3:NZ_CP010879.1/CP010879.1; plasmid pMNCRE44_4:NZ_CP010880.1/CP010880.1; plasmid pMNCRE44_5:NZ_CP010881.1/CP010881.1; plasmid pMNCRE44_6:NZ_CP010882.1/CP010882.1	-	7	5587	5168	2/23/15	2/23/17	Complete Genome	University of Minnesota	SAMN03287565	GCA_000931565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/565/GCA_000931565.1_ASM93156v1	"2,585,884,426,438,490"	MNCRE44
Paenibacillus peoriae	59893	PRJNA343020	343020	Terrabacteria group	Firmicutes	6.09319	45.5	-	MRTM01	72	5409	5172	1/18/17	4/6/17	Contig	Cornell University	SAMN05929617	GCA_001956115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/115/GCA_001956115.1_ASM195611v1	-	FSL H8-0551
Escherichia coli VR50	941323	PRJEA61445	61445	Proteobacteria	Gammaproteobacteria	5.19607	50.785	chromosome:NZ_CP011134.1/CP011134.1; plasmid pVR50A:NZ_CP011135.1/CP011135.1; plasmid pVR50B:NZ_CP011136.1/CP011136.1; plasmid pVR50C:NZ_CP011137.1/CP011137.1; plasmid pVR50D:NZ_CP011138.1/CP011138.1; plasmid pVR50E:NZ_CP011139.1/CP011139.1; plasmid pVR50F:NZ_CP011140.1/CP011140.1; plasmid pVR50G:NZ_CP011141.1/CP011141.1; plasmid pVR50H:NZ_CP011142.1/CP011142.1; plasmid pVR50I:NZ_CP011143.1/CP011143.1	-	10	5400	4966	4/2/15	2/23/17	Complete Genome	The University of Queensland	SAMN03371467	GCA_000968515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/515/GCA_000968515.1_ASM96851v1	25667270	VR50
Carnobacterium maltaromaticum	2751	PRJNA222257	222257	Terrabacteria group	Firmicutes	3.53566	34.5	-	JQBV01	56	3302	3191	11/6/15	4/4/17	Scaffold	Shanghai Majorbio	SAMN02797807	GCA_001438765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/765/GCA_001438765.1_ASM143876v1	26415554	DSM 20730
Herbaspirillum rubrisubalbicans NBRC 102523	1223495	PRJDB421	173140	Proteobacteria	Betaproteobacteria	5.52019	61.6	-	BCUJ01	101	4927	4763	2/23/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046708	GCA_001591225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/225/GCA_001591225.1_ASM159122v1	-	NBRC 102523
Bacillus aquimaris	189382	PRJNA341790	341790	Terrabacteria group	Firmicutes	4.41493	44.8	-	MINN01	161	4403	4247	11/14/16	4/16/17	Contig	National Centre for Cell Science Pune	SAMN05728461	GCA_001877785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/785/GCA_001877785.1_PlanoSAMM	-	SAMM
Enterococcus mundtii crl1656	1072576	PRJNA71221	71221	Terrabacteria group	Firmicutes	3.06451	38.4	-	AFWZ01	643	2925	2511	10/27/11	3/30/17	Contig	IBR-UNR	SAMN02469907	GCA_000233395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/395/GCA_000233395.2_ASM23339v2	22207752	crl1656
Rhodococcus fascians A78	1443898	PRJNA233522	233522	Terrabacteria group	Actinobacteria	5.9995	64.4	-	JMEU01	41	5659	5503	9/30/14	4/2/17	Scaffold	Oregon State University	SAMN02569996	GCA_000760775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/775/GCA_000760775.1_R_fas_A78	-	A78
Lactobacillus mali KCTC 3596 = DSM 20444	1046596	PRJNA84435	84435	Terrabacteria group	Firmicutes	2.14936	36.2	-	AKKT01	196	2147	1991	7/9/12	4/7/17	Contig	"Microbiology Dept, University College Cork"	SAMN02471469	GCA_000276905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/905/GCA_000276905.1_LmaliDSM20444T	-	DSM 20444
Leptospirillum ferriphilum	178606	PRJNA290892	290892	Nitrospirae	Nitrospira	2.47567	54.4	-	LGSH01	74	2552	2419	9/9/15	4/11/17	Contig	Fundacion Ciencia & Vida	SAMN03922415	GCA_001280545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/545/GCA_001280545.1_ASM128054v1	26925196	Sp-Cl
Oenococcus kitaharae	336988	PRJNA264402	264402	Terrabacteria group	Firmicutes	1.82556	42.7	-	JSAH01	16	1859	1776	10/5/16	4/13/17	Scaffold	Institut des Sciences de la Vigne et du Vin	SAMN03121843	GCA_001752515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/515/GCA_001752515.1_ASM175251v1	-	NRIC_0649
Rhodococcus ruber	1830	PRJNA306614	306614	Terrabacteria group	Actinobacteria	5.3031	70.7	-	LRRL01	164	4930	4677	5/18/16	4/12/17	Contig	Northumbria University	SAMN04357318	GCA_001646835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/646/835/GCA_001646835.1_ASM164683v1	-	DSM 43338
Escherichia coli	562	PRJNA316786	316786	Proteobacteria	Gammaproteobacteria	5.47114	50.7822	chromosome:NZ_CP018957.1/CP018957.1; plasmid pEC316_2:NZ_CP018955.1/CP018955.1; plasmid pEC316_3:NZ_CP018954.1/CP018954.1; plasmid pEC316_KPC:NZ_CP018956.1/CP018956.1	-	4	5663	5294	3/3/17	3/6/17	Complete Genome	University of Oxford	SAMN05511183	GCA_002011985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/985/GCA_002011985.1_ASM201198v1	-	Ecol_316
Rhodococcus pyridinivorans KG-16	1441730	PRJNA232743	232743	Terrabacteria group	Actinobacteria	5.82883	67.7	-	AZXY01	87	5286	5074	12/11/15	4/5/17	Contig	Centre for Cellular and Molecular Biology (CSIR-CCMB)	SAMN02486559	GCA_001465325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/465/325/GCA_001465325.1_ASM146532v1	26868394	KG-16
Pseudomonas synxantha NBRC 3913	1215118	PRJDB226	171645	Proteobacteria	Gammaproteobacteria	6.76849	59.7	-	BDAK01	76	6281	6024	4/4/17	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046938	GCA_002091795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/795/GCA_002091795.1_ASM209179v1	-	NBRC 3913
Arcobacter thereius	544718	PRJNA283162	283162	Proteobacteria	delta/epsilon subdivisions	1.93011	26.9	-	LDIS01	8	1969	1916	7/26/16	4/13/17	Scaffold	Ghent University	SAMN03609672	GCA_001695275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/275/GCA_001695275.1_ASM169527v1	-	440
Arcobacter skirrowii	28200	PRJNA307998	307998	Proteobacteria	delta/epsilon subdivisions	1.72856	28	-	LRUZ01	41	1810	1746	2/25/16	4/12/17	Scaffold	Agriculture and Agri-Food Canada	SAMN04386099	GCA_001572955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/955/GCA_001572955.1_ASM157295v1	-	L405
Escherichia coli	562	PRJNA375745	375745	Proteobacteria	Gammaproteobacteria	5.46531	50.7798	chromosome:NZ_CP019903.1/CP019903.1; plasmid pMCR1-NY:NZ_CP019908.1/CP019908.1; plasmid unnamed1:NZ_CP019904.1/CP019904.1; plasmid unnamed2:NZ_CP019907.1/CP019907.1; plasmid unnamed3:NZ_CP019909.1/CP019909.1; plasmid unnamed4:NZ_CP019910.1/CP019910.1; plasmid unnamed5:NZ_CP019906.1/CP019906.1; plasmid unnamed6:NZ_CP019905.1/CP019905.1	-	8	5849	5327	3/2/17	3/8/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06344815	GCA_002009315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/315/GCA_002009315.1_ASM200931v1	-	MDR_56
Arcobacter cryaerophilus	28198	PRJNA307600	307600	Proteobacteria	delta/epsilon subdivisions	2.03488	27.2	-	LRUR01	67	2083	2002	2/25/16	4/12/17	Scaffold	Agriculture and Agri-Food Canada	SAMN04386091	GCA_001572855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/855/GCA_001572855.1_ASM157285v1	-	L398
Campylobacter hyointestinalis subsp. hyointestinalis	91352	PRJNA241485	241485	Proteobacteria	delta/epsilon subdivisions	1.73327	33.9	-	JHQP01	26	1708	1533	6/12/14	6/12/14	Contig	National Center for Biotechnology	SAMN02690717	GCA_000705275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/275/GCA_000705275.1_Campylobacter_8_barcode	-	DSM 19053
Campylobacter lanienae	75658	PRJNA341010	341010	Proteobacteria	delta/epsilon subdivisions	1.70933	34.1	-	MJJU01	85	1772	1670	5/15/17	9/19/17	Contig	USDA	SAMN05687030	GCA_002138615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/615/GCA_002138615.1_ASM213861v1	28854596	RM6995
Enterococcus durans ATCC 6056	1140001	PRJNA82537	82537	Terrabacteria group	Firmicutes	3.15375	38.1	-	AHYU01	19	3055	2821	5/31/13	4/8/17	Scaffold	Broad Institute	SAMN02596963	GCA_000406985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/985/GCA_000406985.1_Ente_dura_ATCC6056_V1	-	ATCC 6056
Neorhizobium galegae bv. orientalis	323655	PRJEB6976	282473	Proteobacteria	Alphaproteobacteria	6.07362	61.6	-	CCRN01	59	5845	5649	4/29/15	4/3/17	Contig	UH	SAMEA2698480	GCA_000985895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/895/GCA_000985895.1_NgalHAMBI2610Draft	-	-
Raoultella planticola	575	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.75279	55.7	-	MPYJ03	55	5563	5321	12/14/16	5/6/17	Contig	JCVI	SAMN05956092	GCA_001903595.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/595/GCA_001903595.3_ASM190359v3	-	1175_2058
Acinetobacter ursingii DSM 16037 = CIP 107286	981336	PRJNA62431	62431	Proteobacteria	Gammaproteobacteria	3.56842	40	-	AIEA01	145	3420	3079	2/21/12	4/10/17	Contig	University of Birmingham	SAMN02471602	GCA_000248135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/135/GCA_000248135.2_ASM24813v2	23259572	DSM 16037
Sulfobacillus thermosulfidooxidans	28034	PRJNA290653	290653	Terrabacteria group	Firmicutes	3.82802	48.9	-	LGRO01	3	3774	3654	9/9/15	4/11/17	Scaffold	Fundacion Ciencia & Vida	SAMN03894429	GCA_001280565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/565/GCA_001280565.1_ASS.CBAR13.1	-	CBAR-13
Emticicia oligotrophica	312279	PRJEB19501	380479	FCB group	Bacteroidetes/Chlorobi group	0.397601	37.7	-	FXVE01	20	-	-	5/12/17	5/12/17	Scaffold	UNIVERSITY OF DELHI	SAMEA103916782	GCA_900177585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/585/GCA_900177585.1_Emticicia_sp._MM	-	-
Leclercia adecarboxylata	83655	PRJNA277417	277417	Proteobacteria	Gammaproteobacteria	5.21175	55.4	-	LDWM01	66	5087	4845	6/24/15	4/10/17	Contig	University of Malaya	SAMN03751784	GCA_001038925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/925/GCA_001038925.1_ASM103892v1	-	LK24
Escherichia coli KO11FL	595495	PRJNA33875	33875	Proteobacteria	Gammaproteobacteria	5.02932	50.7784	chromosome:NC_016902.1/CP002516.1; plasmid pEKO1101:NC_016904.1/CP002517.1; plasmid pEKO1102:NC_016903.1/CP002518.1	-	3	5217	4919	2/14/11	2/22/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00016779	GCA_000147855.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/855/GCA_000147855.3_ASM14785v3	-	KO11
Pseudomonas viridiflava	33069	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.90203	59.4	-	LJRS01	254	5353	5172	10/20/15	4/4/17	Scaffold	University of Toronto	SAMN03976266	GCA_001401215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/215/GCA_001401215.1_PvrICMP2848	-	ICMP2848
Vibrio navarrensis	29495	PRJNA242769	242769	Proteobacteria	Gammaproteobacteria	4.33152	48.5	-	JMCH01	176	4040	3826	10/7/14	4/9/17	Contig	CDC	SAMN02708867	GCA_000764355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/355/GCA_000764355.1_2541-90v1.0	-	2232
Pediococcus claussenii	187452	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.87935	36.7	-	JQBB01	44	1848	1765	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02797810	GCA_001436905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/905/GCA_001436905.1_ASM143690v1	26415554	DSM 14800
Actinobacillus suis	716	PRJNA288598	288598	Proteobacteria	Gammaproteobacteria	2.4235	40.3	-	MTBX01	116	2302	2182	4/6/17	4/8/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN03817197	GCA_002081635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/635/GCA_002081635.1_ASM208163v1	-	H91-0406
Bacillus simplex	1478	PRJNA318162	318162	Terrabacteria group	Firmicutes	6.49494	40.2	-	LWJJ01	23	6249	5868	5/3/16	4/10/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04633524	GCA_001636475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/475/GCA_001636475.1_ASM163647v1	-	FJAT-2295
Flavonifractor plautii	292800	PRJEB10915	297013	Terrabacteria group	Firmicutes	4.98885	59.2	-	CZAS01	128	5071	4795	10/1/15	4/4/17	Contig	SC	SAMEA3545355	GCA_001405195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/195/GCA_001405195.1_14207_7_15	-	2789STDY5834892
Anaerostipes hadrus	649756	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.45973	36.7	-	CYYH01	20	2426	2248	10/1/15	4/4/17	Contig	SC	SAMEA3545238	GCA_001404655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/655/GCA_001404655.1_13414_6_14	-	2789STDY5608830
Escherichia coli W	566546	PRJNA62301	62301	Proteobacteria	Gammaproteobacteria	5.00535	50.7764	chromosome:NC_017664.1/CP002967.1; plasmid pRK1:NC_017665.1/CP002968.1; plasmid pRK2:NC_017662.1/CP002969.1	-	3	5186	4907	4/6/12	2/22/17	Complete Genome	University of Florida	SAMN02604169	GCA_000258145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/145/GCA_000258145.1_ASM25814v1	22075923	W
Pseudomonas pseudoalcaligenes	330	PRJNA264940	264940	Proteobacteria	Gammaproteobacteria	6.88999	62.4	-	JTFL01	131	6548	6042	3/25/15	4/21/17	Scaffold	BGI-SZ	SAMN03144565	GCA_000962895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/895/GCA_000962895.1_ASM96289v1	-	S1
Escherichia coli W	566546	PRJNA48011	48011	Proteobacteria	Gammaproteobacteria	5.00886	50.7764	chromosome:NC_017635.1/CP002185.1; plasmid pRK1:NC_017637.1/CP002186.1; plasmid pRK2:NC_017636.1/CP002187.1	-	3	5195	4901	12/14/10	3/16/17	Complete Genome	AIBN/KRIBB	SAMN02602978	GCA_000184185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/184/185/GCA_000184185.1_ASM18418v1	21208457	W
Escherichia coli	562	PRJNA316786	316786	Proteobacteria	Gammaproteobacteria	5.40514	50.775	chromosome:NZ_CP018979.1/CP018979.1; plasmid pEC656_1:NZ_CP018978.1/CP018978.1; plasmid pEC656_KPC:NZ_CP018977.1/CP018977.1	-	3	5681	5324	3/3/17	3/6/17	Complete Genome	University of Oxford	SAMN05511161	GCA_002012065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/065/GCA_002012065.1_ASM201206v1	-	Ecol_656
Mycobacterium chelonae	1774	PRJNA347845	347845	Terrabacteria group	Actinobacteria	5.11552	64	-	MLHW01	21	5004	4880	10/26/16	4/5/17	Contig	University of Georgia	SAMN05897978	GCA_001853545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/545/GCA_001853545.1_ASM185354v1	-	42895
Rhizobium tropici	398	PRJNA247570	247570	Proteobacteria	Alphaproteobacteria	8.05499	60	-	JUHI01	74	7719	7482	12/9/14	4/10/17	Contig	DOE Joint Genome Institute	SAMN02787158	GCA_000799755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/755/GCA_000799755.1_ASM79975v1	-	PTD1
Azospirillum brasilense	192	PRJNA395865	395865	Proteobacteria	Alphaproteobacteria	7.25781	68.5	-	NOWT01	137	6656	6350	8/11/17	8/15/17	Scaffold	Instituto Nacional de Tecnologia Agropecuaria INTA-EEA Famailla	SAMN07415657	GCA_002245955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/955/GCA_002245955.1_ASM224595v1	-	2A1
Thermodesulfobacterium commune	1741	PRJNA278302	278302	Thermodesulfobacteria	Thermodesulfobacteria	1.39193	36.9	-	LGFP01	89	1416	1416	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445142	GCA_001508915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/915/GCA_001508915.1_ASM150891v1	26787827	-
Shigella flexneri 1a	374923	PRJNA288250	288250	Proteobacteria	Gammaproteobacteria	4.85334	50.7747	chromosome:NZ_CP012735.1/CP012735.1; plasmid unnamed:NZ_CP012736.1/CP012736.1; plasmid unnamed:NZ_CP012733.1/CP012733.1; plasmid unnamed:NZ_CP012734.1/CP012734.1; plasmid unnamed:NZ_CP012732.1/CP012732.1	-	5	5345	4460	3/1/16	8/8/17	Complete Genome	Hangzhou Centrer for Disease Control amd Prevention	SAMN03797406	GCA_001578125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/125/GCA_001578125.1_ASM157812v1	-	228
Actinomyces naeslundii	1655	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.19793	67.5	-	MSKZ01	56	2720	2548	1/5/17	4/6/17	Scaffold	King's College London	SAMN05898714	GCA_001937475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/475/GCA_001937475.1_ASM193747v1	-	R19039
Tannerella forsythia	28112	PRJNA266975	266975	FCB group	Bacteroidetes/Chlorobi group	3.28175	47.1	-	JUET01	141	2731	2579	5/13/15	6/12/17	Contig	BOKU Vienna	SAMN03176940	GCA_001006485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/485/GCA_001006485.1_ASM100648v1	26067981	ATCC 43037
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	5.24768	50.7729	chromosome:NZ_CP010157.1/CP010157.1; plasmid A:NZ_CP010158.1/CP010158.1; plasmid B:NZ_CP010159.1/CP010159.1	-	3	5452	5020	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252428	GCA_001900735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/735/GCA_001900735.1_ASM190073v1	-	D10
Dickeya chrysanthemi	556	PRJNA264127	264127	Proteobacteria	Gammaproteobacteria	4.95236	56.8	-	JRWY01	145	4451	4243	11/10/14	4/9/17	Contig	University of Malaya	SAMN03113152	GCA_000774065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/065/GCA_000774065.1_ASM77406v1	-	M074
Escherichia coli	562	PRJNA307507	307507	Proteobacteria	Gammaproteobacteria	5.31504	50.7687	chromosome:CP013837.1; plasmid pJJ1897_1:CP013836.1	-	2	5336	4695	1/12/16	1/12/16	Complete Genome	University of Minnesota	SAMN04381850	GCA_001513655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/655/GCA_001513655.1_ASM151365v1	-	JJ1897
Candidatus Glomeribacter gigasporarum	132144	PRJNA276133	276133	Proteobacteria	Betaproteobacteria	1.3397	49.9	-	LXRI01	607	-	-	7/12/16	7/12/16	Scaffold	Cornell University	SAMN03421200	GCA_001684175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/684/175/GCA_001684175.1_ASM168417v1	-	IN211
Komagataeibacter europaeus LMG 18890	940283	PRJEA61321	61321	Proteobacteria	Alphaproteobacteria	4.2274	61.3	-	CADP01	321	4229	3622	2/21/11	5/18/17	Scaffold	Vital-IT - Swiss Institute of Bioinformatics	SAMEA2272631	GCA_000285295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/295/GCA_000285295.1_ASM28529v1	-	type strain:LMG 18890
Cutibacterium avidum	33010	PRJNA272115	272115	Terrabacteria group	Actinobacteria	2.46715	63.4	-	LRVD01	16	2292	2136	2/2/16	4/6/17	Scaffold	The Genome Institute at Washington University	SAMN03948577	GCA_001546875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/875/GCA_001546875.1_ASM154687v1	-	MJR7694
Streptococcus sobrinus TCI-13	1074053	PRJNA71875	71875	Terrabacteria group	Firmicutes	2.05348	43.5	-	AGGC01	292	2049	1828	10/6/11	3/30/17	Contig	JCVI	SAMN02436627	GCA_000227805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/805/GCA_000227805.2_SMUT1-NEX_2-13	-	TCI-13
Morganella morganii	582	PRJNA261723	261723	Proteobacteria	Gammaproteobacteria	4.23824	50.7	-	JRKW01	57	4167	3961	10/31/14	4/2/17	Scaffold	Walter Reed Army Institute of Research	SAMN03075590	GCA_000770295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/295/GCA_000770295.1_ASM77029v1	25870058	MRSN22709
Acidithiobacillus thiooxidans	930	PRJNA319320	319320	Proteobacteria	Acidithiobacillia	3.85414	53.1	-	LWSB01	270	4196	3772	8/16/16	4/5/17	Contig	Central South University	SAMN04884930	GCA_001705625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/625/GCA_001705625.1_ASM170562v1	27548157	DMC
Escherichia coli JJ1886	1355100	PRJNA218163	218163	Proteobacteria	Gammaproteobacteria	5.30828	50.7667	chromosome:NC_022648.1/CP006784.1; plasmid pJJ1886_1:NC_022661.1/CP006785.1; plasmid pJJ1886_2:NC_022649.1/CP006786.1; plasmid pJJ1886_3:NC_022662.1/CP006787.1; plasmid pJJ1886_4:NC_022650.1/CP006788.1; plasmid pJJ1886_5:NC_022651.1/CP006789.1	-	6	5589	5238	10/29/13	2/22/17	Complete Genome	Statens Serum Institut	SAMN02603887	GCA_000493755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/755/GCA_000493755.1_ASM49375v1	24309736	JJ1886
Proteus vulgaris	585	PRJEB9439	285659	Proteobacteria	Gammaproteobacteria	4.28473	37.8	-	CVRZ01	60	4031	3682	6/5/15	4/10/17	Contig	URMITE	SAMEA3444916	GCA_001049975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/975/GCA_001049975.1_PRJEB9439_assembly_1	-	CSUR P1868
Agrobacterium rhizogenes	359	PRJNA321916	321916	Proteobacteria	Alphaproteobacteria	5.27735	59.7862	chromosome:NZ_CM004386.1/CM004386.1	LYBK01	18	5037	4873	5/22/16	4/5/17	Chromosome	WRRC-USDA-ARS	SAMN05006657	GCA_001649535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/535/GCA_001649535.1_ASM164953v1	27469966	NCPPB2659
Staphylococcus sciuri	1296	PRJNA278195	278195	Terrabacteria group	Firmicutes	2.7437	32.4	-	LDTM01	56	2778	2677	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401359	GCA_001476555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/555/GCA_001476555.1_ASM147655v1	26793183	NS202
Lactobacillus acidipiscis KCTC 13900	1046599	PRJDA68091	68091	Terrabacteria group	Firmicutes	2.28644	39.1	-	BACS01	487	2221	1969	6/21/11	4/7/17	Contig	Korea Research Institute of Bioscience and Biotechnology	SAMD00036563	GCA_000260635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/635/GCA_000260635.1_ASM26063v1	21742864	KCTC 13900
Escherichia coli	562	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	4.95934	50.7608	chromosome:NZ_CP021691.1/CP021691.1; plasmid tig00001251:NZ_CP021692.1/CP021692.1; plasmid tig00001252:NZ_CP021693.1/CP021693.1	-	3	5131	4750	6/8/17	6/10/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014992	GCA_002180215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/215/GCA_002180215.1_ASM218021v1	-	AR_0151
Lactobacillus pentosus MP-10	1028490	PRJEB14340	327326	Terrabacteria group	Firmicutes	3.89122	46	-	FLYG01	6	3662	3378	7/20/16	4/13/17	Contig	University of Jaén	SAMEA4028762	GCA_900092635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/635/GCA_900092635.1_017747.polished.fixstart	-	-
Streptomyces venezuelae ATCC 10712	953739	PRJNA62209	62209	Terrabacteria group	Actinobacteria	8.22645	72.4	chromosome:NC_018750.1/FR845719.1	-	1	7464	7135	4/7/11	5/19/17	Chromosome	John Innes Centre	SAMEA3138410	GCA_000253235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/235/GCA_000253235.1_ASM25323v1	21463507	ATCC 10712
Selenomonas ruminantium subsp. ruminantium ATCC 12561	1280706	PRJNA185691	185691	Terrabacteria group	Firmicutes	3.38707	48.1	-	AUJE01	67	3208	3018	7/10/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441491	GCA_000424065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/065/GCA_000424065.1_ASM42406v1	-	ATCC 12561
Hafnia alvei ATCC 51873	1002364	PRJNA65123	65123	Proteobacteria	Gammaproteobacteria	4.88388	48.2	-	AGCI01	79	4591	4416	12/21/11	6/15/17	Scaffold	Washington University Genome Center	SAMN02299450	GCA_000239255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/255/GCA_000239255.1_ASM23925v1	-	ATCC 51873
Tetragenococcus halophilus	51669	PRJNA310993	310993	Terrabacteria group	Firmicutes	2.4209	35.8	-	LSFG01	87	2393	2147	3/16/16	4/12/17	Contig	Kyunghee University	SAMN04457852	GCA_001593045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/045/GCA_001593045.1_ASM159304v1	-	FBL3
Enterococcus hirae EnGen0127	1157417	PRJNA88261	88261	Terrabacteria group	Firmicutes	2.97114	36.8	-	AISM01	10	2760	2545	5/3/13	4/1/17	Scaffold	Broad Institute	SAMN00808944	GCA_000391765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/765/GCA_000391765.1_Ente_faec_2006-70-121_V1	-	EnGen0127
Xanthomonas alfalfae	366650	PRJNA342189	342189	Proteobacteria	Gammaproteobacteria	4.97086	64.9	-	MIKD01	499	4596	4005	10/27/16	4/13/17	Contig	University of Florida	SAMN05750688	GCA_001855615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/615/GCA_001855615.1_ASM185561v1	-	GEV-Rose-07
Acetobacter tropicalis	104102	PRJNA288385	288385	Proteobacteria	Alphaproteobacteria	3.55745	55.8	-	LHZQ01	222	3194	2962	3/7/16	4/12/17	Contig	Ghent University	SAMN03799288	GCA_001580915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/915/GCA_001580915.1_ASM158091v1	-	LMG 19825
Escherichia coli	562	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	4.73422	50.7589	chromosome:NZ_CP020058.1/CP020058.1; plasmid unitig_1:NZ_CP020059.1/CP020059.1; plasmid unitig_2:NZ_CP020060.1/CP020060.1	-	3	4890	4510	3/21/17	3/23/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014902	GCA_002056065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/065/GCA_002056065.1_ASM205606v1	-	AR_0061
Vibrio nigripulchritudo SOn1	1238450	PRJEB563	222444	Proteobacteria	Gammaproteobacteria	6.63284	45.5	-	CAOF01	2	6053	5902	10/1/13	4/2/17	Scaffold	Genoscope CEA	SAMEA3139046	GCA_000723765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/765/GCA_000723765.1_ASP_PRJEB563_v1	23739050	SOn1
Mycobacterium canettii CIPT 140070017	1205677	PRJEB95	184391	Terrabacteria group	Actinobacteria	4.52447	65.5	chromosome:NC_019952.1/FO203510.1	-	1	4320	3979	12/19/12	5/19/17	Chromosome	Genoscope CEA	SAMEA2272217	GCA_000328825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/825/GCA_000328825.1_ASM32882v1	23291586	CIPT 140070017
Paenibacillus riograndensis	483937	PRJNA293528	293528	Terrabacteria group	Firmicutes	7.34959	51	-	LIRA01	2107	7115	6098	2/2/16	2/2/16	Contig	UFRGS	SAMN04005667	GCA_001546095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/095/GCA_001546095.1_ASM154609v1	-	CAR114
Pantoea agglomerans Eh318	1408177	PRJNA222832	222832	Proteobacteria	Gammaproteobacteria	5.03584	54.8	-	AXOF01	34	4741	4511	5/8/14	9/3/17	Scaffold	University of Regina	SAMN02768228	GCA_000687245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/245/GCA_000687245.1_Eh318v1.0	24796857	Eh318
Mycobacterium africanum K85	611304	PRJNA238922	238922	Terrabacteria group	Actinobacteria	4.40341	65.5	-	JLCY01	6	4228	4028	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02595307	GCA_000665865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/865/GCA_000665865.1_Myco_afri_K85_V1	-	K85
Brevibacillus laterosporus	1465	PRJNA247694	247694	Terrabacteria group	Firmicutes	5.27243	41.3	-	JNFS01	3	4683	4304	7/25/14	4/9/17	Contig	Zhejiang University	SAMN02777949	GCA_000733515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/515/GCA_000733515.1_ASM73351v1	-	B9
Mycobacterium colombiense	339268	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.54751	67.2	-	LZSX01	110	5238	5023	6/17/16	4/10/17	Contig	JCVI	SAMN04691980	GCA_001665835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/835/GCA_001665835.1_ASM166583v1	-	852002-51834_SCH5396731
Streptococcus pasteurianus	197614	PRJNA295460	295460	Terrabacteria group	Firmicutes	1.99389	37.2	-	LJPL01	23	2030	1828	9/27/16	4/13/17	Contig	Huazhong Agricultural University	SAMN04074746	GCA_001746975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/975/GCA_001746975.1_ASM174697v1	27669217	AL101002
[Propionibacterium] humerusii HL037PA3	765124	PRJNA49283	49283	Terrabacteria group	Actinobacteria	2.62167	59.9	-	ADXV01	24	2648	2469	8/5/10	4/6/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189213	GCA_000145415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/415/GCA_000145415.1_ASM14541v1	-	HL037PA3
Lactobacillus kefiranofaciens subsp. kefiranofaciens DSM 5016 = JCM 6985	1423827	PRJDB645	243224	Terrabacteria group	Firmicutes	2.25409	37.2	-	BAMG01	123	2237	1810	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00008926	GCA_000615685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/685/GCA_000615685.1_ASM61568v1	-	JCM 6985
Melissococcus plutonius	33970	PRJNA263542	263542	Terrabacteria group	Firmicutes	2.07593	31.1047	plasmid pMP19:NZ_CM003360.1/CM003360.1	JSBA01	9	1819	1617	7/7/15	4/3/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03103709	GCA_001047395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/395/GCA_001047395.1_ASM104739v1	-	49.3
Haemophilus haemolyticus HK386	1095742	PRJNA75145	75145	Proteobacteria	Gammaproteobacteria	1.82273	38.5	-	AJSV01	30	1752	1667	5/10/12	3/30/17	Contig	J. Craig Venter Institute	SAMN00761814	GCA_000262285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/285/GCA_000262285.1_ASM26228v1	-	HK386
Rickettsia amblyommatis str. Ac/Pa	1359164	PRJNA212446	212446	Proteobacteria	Alphaproteobacteria	1.43983	32.4	-	LANR01	1	1659	1179	3/27/15	4/10/17	Contig	IGS	SAMN02402762	GCA_000964675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/675/GCA_000964675.1_ASM96467v1	-	Ac/Pa
Gallibacterium anatis	750	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.61115	39.6	-	JPXO01	108	2504	2341	11/4/14	4/2/17	Contig	University of Copenhagen	SAMN02900751	GCA_000771775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/775/GCA_000771775.1_ASM77177v1	-	21T2
Photobacterium leiognathi	553611	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.83981	41.4	-	JZSL01	275	4139	3758	3/10/15	4/3/17	Contig	FDA/CFSAN	SAMN03295484	GCA_000950435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/435/GCA_000950435.1_CFSAN029436_01.0	-	ATCC 33979
Leptospira licerasiae ATCC BAA-1110	1408446	PRJNA223035	223035	Spirochaetes	Spirochaetia	4.21	41.1	-	JAGX01	25	3925	3861	1/14/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02585001	GCA_000526875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/875/GCA_000526875.1_ASM52687v1	-	ATCC BAA-1110
Shigella sonnei Ss046	300269	PRJNA13151	13151	Proteobacteria	Gammaproteobacteria	5.05532	50.7587	chromosome:NC_007384.1/CP000038.1; plasmid pSS046_spA:NC_009345.1/CP000641.1; plasmid pSS046_spB:NC_009346.1/CP000642.1; plasmid pSS046_spC:NC_009347.1/CP000643.1; plasmid pSS_046:NC_007385.1/CP000039.1	-	5	5601	4587	8/29/05	8/4/17	Complete Genome	Microbial Genome Center of ChMPH	SAMN02603602	GCA_000092525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/525/GCA_000092525.1_ASM9252v1	16275786	Ss046
Leptospira noguchii str. 2007001578	1049974	PRJNA74045	74045	Spirochaetes	Spirochaetia	4.96542	35.7	-	AHMH02	162	4658	3986	1/24/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436594	GCA_000243575.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/575/GCA_000243575.3_gls454035v02	-	2007001578
Leptospira weilii str. Ecochallenge	1049986	PRJNA74047	74047	Spirochaetes	Spirochaetia	4.03653	40.9	-	AHMI02	345	4071	3038	1/24/12	4/11/17	Contig	J. Craig Venter Institute	SAMN00739246	GCA_000243595.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/595/GCA_000243595.3_gls454043v02	-	Ecochallenge
Parabacteroides goldsteinii	328812	PRJNA287498	287498	FCB group	Bacteroidetes/Chlorobi group	6.85187	43.5	-	LFJV01	282	5563	5258	6/25/15	6/12/17	Contig	Odense University Hospital	SAMN03782530	GCA_001039445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/445/GCA_001039445.1_ASM103944v1	26294633	910340
Bacteroides salyersiae	291644	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	5.45525	41.9	-	CYXS01	19	4246	4095	10/1/15	4/11/17	Contig	SC	SAMEA3545279	GCA_001405695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/695/GCA_001405695.1_13414_6_55	-	2789STDY5608871
Mycobacterium abscessus subsp. bolletii	319705	PRJNA261046	261046	Terrabacteria group	Actinobacteria	4.98298	64.1	-	JRMF01	76	4979	4803	10/19/16	3/20/17	Contig	Institut Pasteur	SAMN03068289	GCA_001792615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/615/GCA_001792615.1_ASM179261v1	26884275	CIP 108541
Escherichia coli O25b:H4	941280	PRJNA316859	316859	Proteobacteria	Gammaproteobacteria	5.48309	50.757	chromosome:CP015085.1; chromosome unnamed1:CP015087.1; chromosome unnamed2:CP015088.1; plasmid unnamed:CP015086.1	-	4	6107	6000	6/15/16	6/15/16	Complete Genome	"Igenbio, Inc"	SAMN04605558	GCA_001874485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/485/GCA_001874485.1_ASM187448v1	-	O25b:H4
Vibrio rotiferianus DAT722	987060	PRJNA63143	63143	Proteobacteria	Gammaproteobacteria	5.32952	44.7	-	AFAJ01	79	5062	4850	4/6/11	5/19/17	Contig	"The i3 Institute, University of Technology Sydney, Australia"	SAMN02471144	GCA_000195225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/225/GCA_000195225.2_ASM19522v1	21551292	DAT722
Aeromonas veronii AER39	1073382	PRJNA71513	71513	Proteobacteria	Gammaproteobacteria	4.42059	58.8	-	AGWT01	4	4064	3880	9/17/12	5/18/17	Scaffold	Broad Institute	SAMN02463948	GCA_000297975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/975/GCA_000297975.1_Aero_vero_AER39_V1	-	AER39
Escherichia coli	562	PRJNA402083	402083	Proteobacteria	Gammaproteobacteria	4.92005	50.7569	chromosome:NZ_CP023371.1/CP023371.1; plasmid p109:NZ_CP023372.1/CP023372.1; plasmid p3:NZ_CP023374.1/CP023374.1; plasmid p31:NZ_CP023373.1/CP023373.1; plasmid p7:NZ_CP023375.1/CP023375.1; plasmid p92:NZ_CP023376.1/CP023376.1	-	6	5154	4701	9/18/17	9/20/17	Complete Genome	The Roslin Institute	SAMN07618124	GCA_002310735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/735/GCA_002310735.1_ASM231073v1	-	1283
Microbacterium testaceum	2033	PRJNA278184	278184	Terrabacteria group	Actinobacteria	4.0224	69.9	-	LDRT01	291	3786	3551	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401348	GCA_001476655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/655/GCA_001476655.1_ASM147665v1	26793183	NS220
Vibrio sinaloensis	379097	PRJNA269560	269560	Proteobacteria	Gammaproteobacteria	4.51625	46.2	-	JWLU01	81	4201	4064	12/29/14	4/10/17	Contig	University of Malaya	SAMN03254456	GCA_000808555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/555/GCA_000808555.1_ASM80855v1	-	AD032
Avibacterium paragallinarum	728	PRJNA232651	232651	Proteobacteria	Gammaproteobacteria	2.41084	41.3	-	LAEN01	154	2509	2142	4/6/15	4/10/17	Contig	BUAP-UNAM-CINVESTAV	SAMN03417480	GCA_000969305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/305/GCA_000969305.1_ASM96930v1	-	CL
Escherichia coli K-12	83333	PRJNA309537	309537	Proteobacteria	Gammaproteobacteria	4.95918	50.7569	chromosome:NZ_CP014272.1/CP014272.1; plasmid F128-(C3026):NZ_CP014273.1/CP014273.1	-	2	5218	4828	2/11/16	2/25/17	Complete Genome	New England Biolabs	SAMN04435499	GCA_001559675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/675/GCA_001559675.1_ASM155967v1	-	C3026
Xanthomonas gardneri	90270	PRJNA276593	276593	Proteobacteria	Gammaproteobacteria	5.25876	63.5	-	JZJW01	455	4684	4227	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03378956	GCA_001009285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/285/GCA_001009285.1_ASM100928v1	26089818	SM406-11
Lactobacillus fructivorans	1614	PRJNA252104	252104	Terrabacteria group	Firmicutes	1.33223	39.2	-	JOJZ01	25	1308	1241	1/5/15	4/10/17	Contig	Cornell University	SAMN02849426	GCA_000814735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/735/GCA_000814735.1_ASM81473v1	-	DmCS_002
Acidithiobacillus ferrivorans	160808	PRJNA327612	327612	Proteobacteria	Acidithiobacillia	2.99658	56.6	-	MASQ01	190	3087	2778	7/14/16	4/13/17	Contig	Central South University	SAMN05353865	GCA_001685225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/225/GCA_001685225.1_ASM168522v1	-	YL15
Lactobacillus farciminis	1612	PRJNA284512	284512	Terrabacteria group	Firmicutes	2.46532	35.6845	chromosome:CP011952.1; plasmid unnamed 1:CP011953.1; plasmid unnamed 2:CP011954.1	-	3	2371	2217	7/6/15	9/23/15	Chromosome	university of caen lower normandy	SAMN03703113	GCA_001046795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/795/GCA_001046795.1_ASM104679v1	-	CNCM-I-3699-S
Escherichia coli	562	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	5.26203	50.756	chromosome:NZ_CP020116.1/CP020116.1; plasmid unitig_5:NZ_CP020117.1/CP020117.1; plasmid unitig_6:NZ_CP020118.1/CP020118.1; plasmid unitig_7:NZ_CP020119.1/CP020119.1	-	4	5502	5127	3/21/17	3/23/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014945	GCA_002056635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/635/GCA_002056635.1_ASM205663v1	-	AR_0104
Leuconostoc pseudomesenteroides	33968	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.9401	39.1	-	MPHS01	106	1976	1803	3/27/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981488	GCA_002072495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/495/GCA_002072495.1_ASM207249v1	28217118	LMGH278
Nocardiopsis dassonvillei subsp. albirubida NBRC 13392	1223496	PRJDB422	173141	Terrabacteria group	Actinobacteria	7.17722	72	-	BCRR01	190	6314	6022	2/6/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046506	GCA_001552695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/695/GCA_001552695.1_ASM155269v1	-	NBRC 13392
Meiothermus ruber	277	PRJNA236114	236114	Terrabacteria group	Deinococcus-Thermus	2.9681	63.5	-	JXOP01	170	2959	2757	2/12/15	4/10/17	Contig	The Pennsylvania State University	SAMN03287223	GCA_000836395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/836/395/GCA_000836395.1_ASM83639v1	25814606	A
Leuconostoc gelidum subsp. gelidum KCTC 3527	927691	PRJNA60229	60229	Terrabacteria group	Firmicutes	1.95728	36.6	-	AEMI01	43	1922	1838	11/17/10	4/7/17	Contig	Korea Research Institute of Bioscience and Biotechnology (KRIBB)	SAMN02470198	GCA_000166715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/715/GCA_000166715.2_ASM16671v1	21131494	KCTC 3527
Shigella sonnei	624	PRJNA272666	272666	Proteobacteria	Gammaproteobacteria	5.13271	50.7531	chromosome:NZ_CP010829.1/CP010829.1; plasmid pFORC11.1:NZ_CP010830.1/CP010830.1; plasmid pFORC11.2:NZ_CP010831.1/CP010831.1; plasmid pFORC11.3:NZ_CP010832.1/CP010832.1	-	4	5707	4680	1/20/16	8/8/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN03284775	GCA_001518855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/855/GCA_001518855.1_ASM151885v1	-	FORC_011
Streptobacillus moniliformis	34105	PRJNA319313	319313	Fusobacteria	Fusobacteriia	1.69719	26.3	-	LXKG01	166	1581	1464	6/3/16	4/5/17	Contig	Robert Koch Institute	SAMN04892889	GCA_001655985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/985/GCA_001655985.1_ASM165598v1	-	IKC5
Aeromonas caviae	648	PRJNA270276	270276	Proteobacteria	Gammaproteobacteria	4.37672	61.7	-	JWJP01	91	4045	3900	1/2/15	4/3/17	Contig	University of Malaya	SAMN03265383	GCA_000813475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/475/GCA_000813475.1_ASM81347v1	25745006	L12
Lactobacillus animalis	1605	PRJNA244367	244367	Terrabacteria group	Firmicutes	1.852	41.1	-	JMHU01	30	1870	1729	5/8/14	4/9/17	Scaffold	Texas A&M University	SAMN02725516	GCA_000685785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/785/GCA_000685785.1_Lb_animalis_381-IL-28_version_1	24874675	381-IL-28
Lactobacillus coryniformis subsp. torquens DSM 20004 = KCTC 3535	1423822	PRJNA60401	60401	Terrabacteria group	Firmicutes	2.81578	42.9	-	AEOS01	433	2803	2477	12/17/10	4/7/17	Contig	Korea Research Institute of Bioscience and Biotechnology (KRIBB)	SAMN02470831	GCA_000184285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/184/285/GCA_000184285.2_ASM18428v1	-	KCTC 3535
Xanthomonas vesicatoria	56460	PRJNA266386	266386	Proteobacteria	Gammaproteobacteria	5.28682	64	-	JSYJ01	344	4734	4222	12/17/14	4/2/17	Contig	Institut de Recherche pour le Developpement	SAMN03164127	GCA_000803145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/145/GCA_000803145.1_XV_53M_E1.0	25676765	53M
Xanthomonas perforans	442694	PRJNA276610	276610	Proteobacteria	Gammaproteobacteria	5.12225	64.9	-	JZVB01	65	4647	4321	5/18/15	4/3/17	Contig	Universidade de Sao Paulo	SAMN03378975	GCA_001009385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/385/GCA_001009385.1_ASM100938v1	26089818	Xp7-12
Escherichia coli	562	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	4.92486	50.7528	chromosome:NZ_CP021532.1/CP021532.1; plasmid tig00000220:NZ_CP021533.1/CP021533.1; plasmid tig00000221:NZ_CP021534.1/CP021534.1	-	3	5073	4690	6/8/17	6/10/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014990	GCA_002180055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/055/GCA_002180055.1_ASM218005v1	-	AR_0149
Escherichia coli	562	PRJNA253935	253935	Proteobacteria	Gammaproteobacteria	4.99595	50.7528	chromosome:NZ_CP009104.1/CP009104.1; plasmid pO104_H7:NZ_CP009105.1/CP009105.1	-	2	5187	4860	12/15/14	2/23/17	Complete Genome	USDA-ARS	SAMN03264844	GCA_000801165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/165/GCA_000801165.1_ASM80116v1	25887577	RM9387
Methylomonas methanica	421	PRJNA315272	315272	Proteobacteria	Gammaproteobacteria	5.48288	51.3	-	LUUH01	120	5030	4841	5/16/16	4/12/17	Contig	Ghent University	SAMN04555163	GCA_001644115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/115/GCA_001644115.1_ASM164411v1	-	R-45371
Streptococcus vestibularis	1343	PRJNA320256	320256	Terrabacteria group	Firmicutes	1.8638	39.5	-	LXZW01	74	1889	1723	6/4/16	4/12/17	Contig	State University of Campinas	SAMN04931587	GCA_001657905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/905/GCA_001657905.1_ASM165790v1	-	22-04 S5
Escherichia coli SE11	409438	PRJNA18057	18057	Proteobacteria	Gammaproteobacteria	5.15563	50.7481	chromosome:NC_011415.1/AP009240.1; plasmid pSE11-1:NC_011419.1/AP009241.1; plasmid pSE11-2:NC_011413.1/AP009242.1; plasmid pSE11-3:NC_011416.1/AP009243.1; plasmid pSE11-4:NC_011407.1/AP009244.1; plasmid pSE11-5:NC_011408.1/AP009245.1; plasmid pSE11-6:NC_011411.1/AP009246.1	-	7	5398	5059	10/23/08	2/22/17	Complete Genome	Kitasato Institute for Life Sciences	SAMD00061087	GCA_000010385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/385/GCA_000010385.1_ASM1038v1	18931093	SE11
Streptococcus cristatus ATCC 51100	889201	PRJNA67185	67185	Terrabacteria group	Firmicutes	1.99442	42.6	-	AFUE01	10	1995	1848	8/4/11	3/30/17	Contig	J. Craig Venter Institute	SAMN00621700	GCA_000222765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/765/GCA_000222765.2_ASM22276v2	-	ATCC 51100
Streptococcus pseudopneumoniae 22725	1415759	PRJNA225867	225867	Terrabacteria group	Firmicutes	2.23098	39.8	-	AYRO01	117	2419	2106	12/11/13	4/2/17	Contig	"Research Institute of Physical-Chemical Medicine, Moscow, Russia"	SAMN02470838	GCA_000506685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/685/GCA_000506685.1_Spspn.str22725_v1.0	-	22725
Rhodothermus marinus JCM 9785	1295135	PRJDB841	243745	FCB group	Bacteroidetes/Chlorobi group	3.20609	63.8	-	BBDF01	873	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000547	GCA_001312245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/245/GCA_001312245.1_ASM131224v1	-	JCM 9785
Acetobacter aceti NBRC 14818	887700	PRJDB503	174854	Proteobacteria	Alphaproteobacteria	3.55319	57.1	-	BAMU01	209	3221	3059	3/20/15	4/10/17	Contig	Kinki University	SAMD00036630	GCA_000963905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/905/GCA_000963905.1_ASM96390v1	-	NBRC 14818
Kingella kingae 11220434	1188007	PRJNA88539	88539	Proteobacteria	Betaproteobacteria	2.01659	46.7	-	ALIJ01	65	2051	1855	8/6/12	3/30/17	Scaffold	Université Aix-Marseille	SAMN02472055	GCA_000283375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/375/GCA_000283375.1_ASM28337v1	23045489	11220434
Leuconostoc lactis	1246	PRJNA260124	260124	Terrabacteria group	Firmicutes	1.76143	43.1	-	LJIV01	22	1787	1705	10/23/15	4/11/17	Contig	WIKIM	SAMN04026255	GCA_001411775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/775/GCA_001411775.1_ASM141177v1	-	WIKIM21
Pseudoxanthomonas suwonensis J43	935567	PRJNA202350	202350	Proteobacteria	Gammaproteobacteria	3.34374	70.6	-	JAES01	64	3035	2915	1/10/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02584948	GCA_000519025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/025/GCA_000519025.1_ASM51902v1	-	J43
Streptococcus parauberis KRS-02109	1207544	PRJNA170161	170161	Terrabacteria group	Firmicutes	2.04654	35.4	-	ALWR01	5	2046	1947	3/1/13	4/1/17	Contig	Gyeongsang National University	SAMN02469869	GCA_000342505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/505/GCA_000342505.1_type2	24260382	KRS-02109
Eubacterium limosum	1736	PRJEB16275	348861	Terrabacteria group	Firmicutes	4.08795	47.5	-	FNJF01	87	3884	3736	10/20/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04515624	GCA_900103155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/155/GCA_900103155.1_IMG-taxon_2642422557_annotated_assembly	-	32_A2
Sphingobium yanoikuyae XLDN2-5	1074493	PRJNA71691	71691	Proteobacteria	Alphaproteobacteria	5.35784	64.3	-	AFXE01	173	5140	4937	8/30/11	5/19/17	Contig	Shanghai Jiao Tong University	SAMN02470954	GCA_000224695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/695/GCA_000224695.2_ASM22469v2	-	XLDN2-5
Myroides odoratimimus CIP 101113	883154	PRJNA52195	52195	FCB group	Bacteroidetes/Chlorobi group	4.13866	34.1	-	AGEE01	3	3673	3516	1/10/12	5/19/17	Scaffold	Broad Institute	SAMN02463911	GCA_000242135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/135/GCA_000242135.1_Myro_odor_CIP_101113_V1	-	CIP 101113
Staphylococcus simulans	1286	PRJNA272107	272107	Terrabacteria group	Firmicutes	2.73012	35.7	-	LRQJ01	50	2663	2544	2/2/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN03948581	GCA_001546635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/635/GCA_001546635.1_ASM154663v1	-	MJR7712
Escherichia coli ECC-1470	758831	PRJNA257276	257276	Proteobacteria	Gammaproteobacteria	4.90381	50.7469	chromosome:NZ_CP010344.1/CP010344.1; plasmid pECC-1470_100:NZ_CP010345.1/CP010345.1	-	2	5032	4718	2/3/15	2/23/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02949644	GCA_000831565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/565/GCA_000831565.1_ASM83156v1	25814601	ECC-1470
Sinorhizobium fredii USDA 257	1185652	PRJNA163675	163675	Proteobacteria	Alphaproteobacteria	7.03232	61.8945	chromosome:NC_018000.1/CP003563.1	-	20	6820	6292	6/6/12	5/19/17	Chromosome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02641503	GCA_000265205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/205/GCA_000265205.2_ASM26520v2	22843606	USDA 257
Streptococcus pseudoporcinus	361101	PRJEB16023	371377	Terrabacteria group	Firmicutes	2.04994	37.3	-	FMWH01	47	2004	1855	2/6/17	4/17/17	Contig	UNIVERSITY OF CAMBRDGE	SAMEA4506884	GCA_900102955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/955/GCA_900102955.1_SS-662	-	-
Escherichia coli	562	PRJNA316786	316786	Proteobacteria	Gammaproteobacteria	5.2123	50.7445	chromosome:NZ_CP015076.1/CP015076.1; plasmid pEC448_1:NZ_CP015077.1/CP015077.1; plasmid pEC448_OXA163:NZ_CP015078.1/CP015078.1	-	3	5446	5021	4/11/16	2/25/17	Complete Genome	University of Oxford	SAMN04590097	GCA_001618365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/365/GCA_001618365.1_ASM161836v1	-	Ecol_448
Shigella flexneri 4c	1617964	PRJNA356350	356350	Proteobacteria	Gammaproteobacteria	4.98084	50.743	chromosome:NZ_CP020336.1/CP020336.1; plasmid unnamed1:NZ_CP020337.1/CP020337.1; plasmid unnamed2:NZ_CP020338.1/CP020338.1	-	3	5479	4553	8/2/17	8/4/17	Complete Genome	Hangzhou Normal University	SAMN06112245	GCA_002240075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/075/GCA_002240075.1_ASM224007v1	-	1602
Actinomyces oris	544580	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.02539	68.6	-	MSQE01	65	2563	2435	1/3/17	4/6/17	Scaffold	King's College London	SAMN05898719	GCA_001929365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/365/GCA_001929365.1_ASM192936v1	-	F4D1
Prevotella oralis	28134	PRJEB18195	355470	FCB group	Bacteroidetes/Chlorobi group	2.81261	44.5	-	FQVS01	17	2317	2232	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444288	GCA_900129435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/435/GCA_900129435.1_IMG-taxon_2695421016_annotated_assembly	-	DSM 20702
Capnocytophaga ochracea	1018	PRJNA267549	267549	FCB group	Bacteroidetes/Chlorobi group	2.51612	39.6	-	JVFB01	72	2211	2103	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197683	GCA_001057035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/035/GCA_001057035.1_ASM105703v1	26230489	490_CAPN
Vibrio scophthalmi	45658	PRJNA325703	325703	Proteobacteria	Gammaproteobacteria	5.07311	44.5	-	MDCJ01	7	4762	4491	9/12/16	4/13/17	Contig	National Institute of Fisheries Science	SAMN05225367	GCA_001723385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/385/GCA_001723385.1_ASM172338v1	-	FP3289
Streptococcus infantis X	997830	PRJNA64693	64693	Terrabacteria group	Firmicutes	1.8695	39.6	-	AFUQ01	16	1905	1625	8/10/11	3/30/17	Contig	J. Craig Venter Institute	SAMN00255230	GCA_000223335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/223/335/GCA_000223335.2_ASM22333v2	-	X
Veillonella atypica ACS-049-V-Sch6	866776	PRJNA51075	51075	Terrabacteria group	Firmicutes	2.05387	39	-	AEDR01	63	1884	1808	8/10/10	4/7/17	Contig	J. Craig Venter Institute	SAMN00100757	GCA_000179735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/735/GCA_000179735.1_ASM17973v1	-	ACS-049-V-Sch6
Aerococcus urinae	1376	PRJNA315093	315093	Terrabacteria group	Firmicutes	1.93503	42.5	-	LUKP01	72	1739	1678	5/23/16	4/12/17	Contig	Lund University	SAMN04549379	GCA_001649715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/715/GCA_001649715.1_ASM164971v1	-	AU3
Prevotella disiens DNF00882	1401075	PRJNA219674	219674	FCB group	Bacteroidetes/Chlorobi group	2.83221	39.8	-	JRNR01	298	2504	2324	9/26/14	4/9/17	Contig	J. Craig Venter Institute	SAMN02850974	GCA_000759225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/225/GCA_000759225.1_04_NF40_HMP654v01	-	DNF00882
Cellulophaga lytica	979	PRJEB21323	392884	FCB group	Bacteroidetes/Chlorobi group	3.76482	32	-	FZLT01	87	3367	3290	7/7/17	7/15/17	Contig	UNIVERSITY OF LA ROCHELLE - UMR 7266 CNRS LIENSS	SAMEA104144448	GCA_900197635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/197/635/GCA_900197635.1_CL8139	-	-
Vibrio tubiashii	29498	PRJNA264132	264132	Proteobacteria	Gammaproteobacteria	4.14465	45.1	-	JRWQ01	46	3837	3733	11/13/14	4/9/17	Contig	University of Malaya	SAMN03113154	GCA_000775715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/715/GCA_000775715.1_ASM77571v1	25555738	T33
Rahnella aquatilis	34038	PRJNA247593	247593	Proteobacteria	Gammaproteobacteria	5.48298	52.1	-	JUHM01	58	5090	4847	12/9/14	4/10/17	Scaffold	DOE Joint Genome Institute	SAMN02787062	GCA_000799835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/835/GCA_000799835.1_ASM79983v1	-	OV744
Haemophilus parainfluenzae HK2019	1095746	PRJNA75175	75175	Proteobacteria	Gammaproteobacteria	2.10143	39.2	-	AJTC01	42	2051	1972	5/4/12	3/30/17	Contig	J. Craig Venter Institute	SAMN00761859	GCA_000261285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/285/GCA_000261285.1_HparainfluenzaeHK2019v1.0	-	HK2019
Agrobacterium sp. UNC420CL41Cvi	1340437	PRJNA205977	205977	Proteobacteria	Alphaproteobacteria	4.96611	59.7	-	AXUY01	18	4722	4582	10/25/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441443	GCA_000482285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/285/GCA_000482285.1_ASM48228v1	-	UNC420CL41Cvi
Escherichia coli	562	PRJNA353939	353939	Proteobacteria	Gammaproteobacteria	5.1165	50.7406	chromosome:NZ_CP018115.1/CP018115.1; plasmid pMRSN346638_119.3:NZ_CP018116.1/CP018116.1; plasmid pMRSN346638_5.3:NZ_CP018120.1/CP018120.1; plasmid pMRSN346638_61.1:NZ_CP018119.1/CP018119.1; plasmid pMRSN346638_64.5:NZ_CP018118.1/CP018118.1; plasmid pMRSN346638_67.9:NZ_CP018117.1/CP018117.1	-	6	5334	4929	11/28/16	2/25/17	Complete Genome	Walter Reed Army Institute of Research	SAMN06029895	GCA_001886555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/555/GCA_001886555.1_ASM188655v1	-	MRSN346638
Peptoanaerobacter stomatis	796937	PRJNA78565	78565	Terrabacteria group	Firmicutes	2.55328	30.7	-	ALNK01	40	2280	2180	8/27/12	4/7/17	Contig	J. Craig Venter Institute	SAMN00828788	GCA_000293035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/035/GCA_000293035.1_EbactAS15v1.0	-	OBRC8
Pseudomonas fulva	47880	PRJNA270651	270651	Proteobacteria	Gammaproteobacteria	5.89142	62.4	-	JXQW01	125	5314	5117	2/9/15	4/10/17	Contig	University of Chicago	SAMN03267958	GCA_000834555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/555/GCA_000834555.1_ASM83455v1	-	MEJ086
Isoptericola variabilis JCM 11754	1305623	PRJDB956	243796	Terrabacteria group	Actinobacteria	0.884819	69	-	BBGM01	942	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016923	GCA_001313765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/765/GCA_001313765.1_ASM131376v1	-	JCM 11754
Prevotella denticola DNF00960	1401077	PRJNA219676	219676	FCB group	Bacteroidetes/Chlorobi group	3.05021	49.9	-	JRNO01	126	2530	2372	9/26/14	4/9/17	Contig	J. Craig Venter Institute	SAMN02850976	GCA_000759205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/205/GCA_000759205.1_04_NF40_HMP2139v01	-	DNF00960
Achromobacter piechaudii NBRC 102461	1216977	PRJDB239	171907	Proteobacteria	Betaproteobacteria	6.32219	64.8	-	BCTK01	32	5772	5660	2/18/16	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046723	GCA_001571245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/245/GCA_001571245.1_ASM157124v1	-	NBRC 102461
Bacteroides clarus YIT 12056	762984	PRJEB18217	355501	FCB group	Bacteroidetes/Chlorobi group	3.74881	45.4	-	FQWK01	18	3082	2976	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444376	GCA_900129655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/655/GCA_900129655.1_IMG-taxon_2695420967_annotated_assembly	-	YIT 12056
Phascolarctobacterium succinatutens	626940	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.53322	47.5	-	DBOX01	109	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455725	GCA_002299345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/345/GCA_002299345.1_ASM229934v1	28894102	-
Brachyspira pilosicoli WesB	1161918	PRJEA89437	89437	Spirochaetes	Spirochaetia	2.88952	27.9	chromosome:NC_018604.1/HE793032.1	-	1	2671	2525	9/13/12	4/8/17	Chromosome	Wellcome Trust Sanger Insititute	SAMEA2272783	GCA_000319185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/185/GCA_000319185.1_ASM31918v1	22947175	WesB
Streptococcus parasanguinis CC87K	1073372	PRJNA71579	71579	Terrabacteria group	Firmicutes	2.18956	41.7	-	AZJD01	6	2141	2030	12/10/13	4/2/17	Scaffold	Broad Institute	SAMN01162070	GCA_000507765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/507/765/GCA_000507765.1_Stre_para_CC87K_V1	-	CC87K
Enterococcus saccharolyticus	41997	PRJNA270385	270385	Terrabacteria group	Firmicutes	2.55729	36.9	-	JXLD01	50	2573	2507	11/25/16	4/14/17	Scaffold	Inner Mongolia Agricultural University	SAMN03267186	GCA_001886235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/235/GCA_001886235.1_ASM188623v1	-	DSM 20726
Fusobacterium necrophorum subsp. funduliforme B35	1226633	PRJNA186622	186622	Fusobacteria	Fusobacteriia	2.0885	35	-	AOJP01	40	1984	1846	3/26/14	4/2/17	Contig	University of Missouri-Columbia	SAMN02700144	GCA_000600355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/355/GCA_000600355.1_FNF_B35	24786958	B35
[Clostridium] clostridioforme 90A8	999408	PRJNA64867	64867	Terrabacteria group	Firmicutes	5.97428	48.9	-	AGYR01	47	5978	5548	4/19/13	5/19/17	Scaffold	Broad Institute	SAMN02596768	GCA_000371505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/505/GCA_000371505.1_Clos_clos_90A8_V1	-	90A8
Escherichia coli UMNK88	696406	PRJNA42137	42137	Proteobacteria	Gammaproteobacteria	5.66676	50.7397	chromosome:NC_017641.1/CP002729.1; plasmid pUMNK88:NC_017645.1/HQ023862.1; plasmid pUMNK88_91:NC_017642.1/CP002731.1; plasmid pUMNK88_Ent:NC_017640.1/CP002732.1; plasmid pUMNK88_Hly:NC_017643.1/CP002733.1; plasmid pUMNK88_K88:NC_017639.1/CP002730.1	-	6	6108	5629	5/9/11	2/22/17	Complete Genome	University of Minnesota	SAMN02604221	GCA_000212715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/212/715/GCA_000212715.2_ASM21271v2	-	UMNK88
Brevundimonas diminuta	293	PRJNA390480	390480	Proteobacteria	Alphaproteobacteria	3.40299	67.3	-	NIVP01	57	3369	3266	6/22/17	6/26/17	Contig	CAAS	SAMN07236627	GCA_002205925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/925/GCA_002205925.1_ASM220592v1	-	ACCC10507
Escherichia coli	562	PRJNA353939	353939	Proteobacteria	Gammaproteobacteria	5.11663	50.7375	chromosome:NZ_CP018109.1/CP018109.1; plasmid pMRSN346595_120.3:NZ_CP018110.1/CP018110.1; plasmid pMRSN346595_5.3:NZ_CP018114.1/CP018114.1; plasmid pMRSN346595_62.2:NZ_CP018113.1/CP018113.1; plasmid pMRSN346595_64.5:NZ_CP018112.1/CP018112.1; plasmid pMRSN346595_67.9:NZ_CP018111.1/CP018111.1	-	6	5333	4927	11/28/16	2/25/17	Complete Genome	Walter Reed Army Institute of Research	SAMN06029894	GCA_001886755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/755/GCA_001886755.1_ASM188675v1	-	MRSN346595
Leptospira santarosai str. 2000030832	996805	PRJNA63715	63715	Spirochaetes	Spirochaetia	3.99616	41.8	-	AFJN02	45	3979	3630	6/7/11	4/11/17	Contig	J. Craig Venter Institute	SAMN02436630	GCA_000217455.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/455/GCA_000217455.3_gls454040v2.0	-	2000030832
Prevotella bryantii B14	752555	PRJEB16985	351118	FCB group	Bacteroidetes/Chlorobi group	3.55891	38.9	-	FOEM01	38	2889	2754	10/29/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444375	GCA_900110745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/745/GCA_900110745.1_IMG-taxon_2693429877_annotated_assembly	-	B14
Escherichia coli	562	PRJNA353939	353939	Proteobacteria	Gammaproteobacteria	5.11435	50.7366	chromosome:NZ_CP018121.1/CP018121.1; plasmid pMRSN346355_120.3:NZ_CP018122.1/CP018122.1; plasmid pMRSN346355_5.3:NZ_CP018126.1/CP018126.1; plasmid pMRSN346355_61.1:NZ_CP018125.1/CP018125.1; plasmid pMRSN346355_65.5:NZ_CP018124.1/CP018124.1; plasmid pMRSN346355_67.9:NZ_CP018123.1/CP018123.1	-	6	5332	4928	11/28/16	2/25/17	Complete Genome	Walter Reed Army Institute of Research	SAMN06029896	GCA_001886575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/575/GCA_001886575.1_ASM188657v1	-	MRSN346355
Mycoplasma ovipneumoniae	29562	PRJNA253503	253503	Terrabacteria group	Tenericutes	1.03886	28.8	-	JOTG01	81	791	693	8/26/16	4/5/17	Scaffold	Southwest University for Nationalities	SAMN02870873	GCA_001715045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/045/GCA_001715045.1_ASM171504v1	-	TC3
Thermus scotoductus	37636	PRJNA295197	295197	Terrabacteria group	Deinococcus-Thermus	2.37964	65.2	-	LJJR01	55	2542	2096	9/18/15	4/11/17	Contig	University of Bergen	SAMN04040897	GCA_001294665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/665/GCA_001294665.1_ASM129466v1	-	K1
Acinetobacter oleivorans	1148157	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	4.10846	38.6	-	BBSS01	29	3977	3830	2/3/15	4/6/17	Contig	National Institute of Technology and Evaluation	SAMD00019889	GCA_000836035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/836/035/GCA_000836035.1_ASM83603v1	-	KCTC 23045
Shigella sonnei 53G	216599	PRJEA78129	78129	Proteobacteria	Gammaproteobacteria	5.22047	50.7341	chromosome:NC_016822.1/HE616528.1; plasmid A:NC_016833.1/HE616529.1; plasmid B:NC_016823.1/HE616530.1; plasmid C:NC_016824.1/HE616531.1; plasmid E:NC_016834.1/HE616532.1	-	5	5812	4832	1/30/12	8/4/17	Complete Genome	Wellcome Trust Sanger Insititute	SAMEA2272161	GCA_000283715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/715/GCA_000283715.1_ASM28371v1	22863732	53G
Komagataeibacter hansenii	436	PRJNA313937	313937	Proteobacteria	Alphaproteobacteria	3.37452	59.5	-	LUCJ01	37	2979	2836	5/17/16	4/5/17	Scaffold	University of Texas at Austin	SAMN04526078	GCA_001645815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/815/GCA_001645815.1_ASM164581v1	-	NQ5
Lysinibacillus fusiformis ZB2	1231627	PRJNA174998	174998	Terrabacteria group	Firmicutes	4.54953	37.3	-	AMQZ01	58	4487	4374	11/21/12	4/11/17	Contig	Universiti Teknologi Malaysia	SAMN02471427	GCA_000313955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/955/GCA_000313955.2_Lfzb2dn	-	ZB2
Pantoea vagans	470934	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.99032	58.6	-	JUQR01	407	4834	4576	7/10/15	4/10/17	Contig	University of Washington	SAMN03198057	GCA_001067555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/555/GCA_001067555.1_ASM106755v1	26230489	848_PVAG
Escherichia coli	562	PRJNA402083	402083	Proteobacteria	Gammaproteobacteria	5.00072	50.7302	chromosome:NZ_CP023359.1/CP023359.1; plasmid p54:NZ_CP023360.1/CP023360.1; plasmid p80:NZ_CP023361.1/CP023361.1; plasmid p85:NZ_CP023362.1/CP023362.1	-	4	5163	4823	9/18/17	9/20/17	Complete Genome	The Roslin Institute	SAMN07618127	GCA_002310555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/555/GCA_002310555.1_ASM231055v1	-	1943
Odoribacter splanchnicus	28118	PRJNA377666	377666	FCB group	Bacteroidetes/Chlorobi group	4.59523	43.8	-	NFIG01	68	3855	3708	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473727	GCA_002161635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/635/GCA_002161635.1_ASM216163v1	-	An45
Helicobacter suis HS1	710393	PRJEB15616	356154	Proteobacteria	delta/epsilon subdivisions	1.62599	39.9	-	FMSQ01	78	1675	1535	12/4/16	4/6/17	Scaffold	GHENT UNIVERSITY	SAMEA4476651	GCA_900099065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/065/GCA_900099065.1_HS1_output_strain1	-	-
Prevotella nigrescens	28133	PRJNA386731	386731	FCB group	Bacteroidetes/Chlorobi group	2.83797	42.5	-	NHRW01	8	2433	2267	6/21/17	6/24/17	Scaffold	Chosun University	SAMN07125733	GCA_002204475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/475/GCA_002204475.1_ASM220447v1	-	KCOM 1102
Acinetobacter haemolyticus NIPH 261	1217986	PRJNA183264	183264	Proteobacteria	Gammaproteobacteria	3.53126	39.6	-	APQR01	7	3425	3213	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN01828152	GCA_000369085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/085/GCA_000369085.1_Acin_haem_NIPH_261_V1	-	NIPH 261
Shigella flexneri 2a	42897	PRJNA288243	288243	Proteobacteria	Gammaproteobacteria	4.89175	50.7298	chromosome:NZ_CP012137.1/CP012137.1; plasmid 981p1:NZ_CP012138.1/CP012138.1; plasmid 981p2:NZ_CP012139.1/CP012139.1	-	3	5387	4471	3/3/16	8/8/17	Complete Genome	Hangzhou Centrer for Disease Control amd Prevention	SAMN03796074	GCA_001580175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/175/GCA_001580175.1_ASM158017v1	-	981
Escherichia coli ETEC H10407	316401	PRJEA42749	42749	Proteobacteria	Gammaproteobacteria	5.32589	50.7287	chromosome:NC_017633.1/FN649414.1; plasmid p52:NC_017721.1/FN649415.1; plasmid p58:NC_017723.1/FN649416.1; plasmid p666:NC_017722.1/FN649417.1; plasmid p948:NC_017724.1/FN649418.1	-	5	5636	5148	10/21/10	2/22/17	Complete Genome	Wellcome Trust Sanger Institute	SAMEA2272237	GCA_000210475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/475/GCA_000210475.1_ASM21047v1	20802035	ETEC H10407
Escherichia coli	562	PRJNA316786	316786	Proteobacteria	Gammaproteobacteria	5.2231	50.7285	chromosome:NZ_CP018948.1/CP018948.1; plasmid pEC224_1:NZ_CP018947.1/CP018947.1; plasmid pEC224_2:NZ_CP018946.1/CP018946.1; plasmid pEC224_4:NZ_CP018944.1/CP018944.1; plasmid pEC224_5:NZ_CP018943.1/CP018943.1; plasmid pEC224_6:NZ_CP018942.1/CP018942.1; plasmid pEC224_7:NZ_CP018941.1/CP018941.1; plasmid pEC224_8:NZ_CP018940.1/CP018940.1; plasmid pEC224_KPC:NZ_CP018945.1/CP018945.1	-	9	5551	5154	3/3/17	3/6/17	Complete Genome	University of Oxford	SAMN05511177	GCA_002011945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/945/GCA_002011945.1_ASM201194v1	-	Ecol_224
Turicibacter sanguinis	154288	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.73296	34.2	-	CYYS01	103	2571	2439	10/1/15	4/11/17	Contig	SC	SAMEA3545273	GCA_001405075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/075/GCA_001405075.1_13414_6_49	-	2789STDY5608865
Parascardovia denticolens IPLA 20019	1193128	PRJNA167218	167218	Terrabacteria group	Actinobacteria	2.00331	58.5	-	AKII01	38	1724	1566	6/18/12	4/7/17	Contig	IPLA-CSIC	SAMN02470079	GCA_000269845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/845/GCA_000269845.1_ASM26984v1	22887674	IPLA 20019
Streptococcus constellatus subsp. constellatus SK53	1095730	PRJNA75127	75127	Terrabacteria group	Firmicutes	1.84006	37.9	-	AICQ01	54	1804	1700	4/5/12	3/30/17	Contig	J. Craig Venter Institute	SAMN00761792	GCA_000257785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/785/GCA_000257785.1_ASM25778v1	-	SK53
Escherichia coli	562	PRJNA316786	316786	Proteobacteria	Gammaproteobacteria	5.12631	50.7236	chromosome:NZ_CP018953.1/CP018953.1; plasmid pEC276_1:NZ_CP018952.1/CP018952.1; plasmid pEC276_2:NZ_CP018951.1/CP018951.1; plasmid pEC276_3:NZ_CP018950.1/CP018950.1; plasmid pEC276_KPC:NZ_CP018949.1/CP018949.1	-	5	5390	5045	3/3/17	3/6/17	Complete Genome	University of Oxford	SAMN05511184	GCA_002011965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/965/GCA_002011965.1_ASM201196v1	-	Ecol_276
Lactobacillus amylovorus DSM 20531	1423723	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.01738	37.8	-	AZCM01	116	2066	1813	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02369422	GCA_001433985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/985/GCA_001433985.1_ASM143398v1	26415554	DSM 20531
Escherichia coli B7A	340184	PRJNA205485	205485	Proteobacteria	Gammaproteobacteria	5.23044	50.7206	chromosome:NZ_CP005998.1/CP005998.1; plasmid pEB1:NZ_CP005999.1/CP005999.1; plasmid pEB2:NZ_CP006000.1/CP006000.1; plasmid pEB3:NZ_CP006001.1/CP006001.1; plasmid pEB4:NZ_CP006002.1/CP006002.1	-	5	5547	4880	7/14/14	8/8/17	Complete Genome	Shanghai Jiao Tong University	SAMN02918008	GCA_000725265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/265/GCA_000725265.1_ASM72526v1	-	B7A
Escherichia coli	562	PRJNA353939	353939	Proteobacteria	Gammaproteobacteria	5.20092	50.7198	chromosome:NZ_CP018103.1/CP018103.1; plasmid pMR0716_ColRNAI:NZ_CP018108.1/CP018108.1; plasmid pMR0716_IncFII:NZ_CP018107.1/CP018107.1; plasmid pMR0716_PSE:NZ_CP018105.1/CP018105.1; plasmid pMR0716_mcr1:NZ_CP018106.1/CP018106.1; plasmid pMR0716_tem1:NZ_CP018104.1/CP018104.1	-	6	5499	5028	11/28/16	2/26/17	Complete Genome	Walter Reed Army Institute of Research	SAMN06029893	GCA_001886535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/535/GCA_001886535.1_ASM188653v1	-	MRSN352231
Bacillus cytotoxicus	580165	PRJNA394959	394959	Terrabacteria group	Firmicutes	4.31721	35.8	-	NOKE01	3	4519	4021	8/14/17	8/14/17	Contig	University of Zurich	SAMN07367961	GCA_002250925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/925/GCA_002250925.1_ASM225092v1	-	CH_23
Cupriavidus necator	106590	PRJNA297621	297621	Proteobacteria	Betaproteobacteria	7.26781	66.3	-	LMVF01	118	6751	6456	12/23/15	4/4/17	Contig	Nagaoka University of Technology	SAMN04126913	GCA_001481455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/455/GCA_001481455.1_ASM148145v1	26941158	PHE3-6
Veillonella parvula	29466	PRJNA246509	246509	Terrabacteria group	Firmicutes	2.05044	38.6	-	LSDP01	41	1871	1780	2/8/16	4/4/17	Scaffold	The Genome Institute at Washington University	SAMN04324899	GCA_001553335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/335/GCA_001553335.1_ASM155333v1	-	DNF00876
Escherichia coli	562	PRJNA307507	307507	Proteobacteria	Gammaproteobacteria	5.19705	50.718	chromosome:NZ_CP014522.1/CP014522.1; plasmid pZH063_1:NZ_CP014523.1/CP014523.1; plasmid pZH063_2:NZ_CP014524.1/CP014524.1	-	3	5415	5046	2/29/16	2/25/17	Complete Genome	University of Minnesota	SAMN04381853	GCA_001577325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/325/GCA_001577325.1_ASM157732v1	-	ZH063
Xanthomonas euvesicatoria pv. allii CFBP 6369	1437449	PRJNA231977	231977	Proteobacteria	Gammaproteobacteria	5.42724	64.3738	chromosome:NZ_CM002866.1/CM002866.1; plasmid unnamed1:NZ_CM002867.1/CM002867.1; plasmid unnamed2:NZ_CM002868.1/CM002868.1	JOJQ01	3	4889	4532	7/16/14	4/2/17	Chromosome	CIRAD	SAMN02646549	GCA_000730305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/305/GCA_000730305.1_G1	25081256	CFBP 6369
Pseudomonas amygdali pv. lachrymans str. M302278	629267	PRJNA33219	33219	Proteobacteria	Gammaproteobacteria	5.94478	58.4	-	AEAM01	302	5570	5103	7/8/10	5/19/17	Scaffold	University of North Carolina at Chapel Hill	SAMN02471324	GCA_000145885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/885/GCA_000145885.1_ASM14588v1	21799664	M302278
Escherichia coli	562	PRJNA279654	279654	Proteobacteria	Gammaproteobacteria	5.31246	50.717	chromosome:NZ_CP015159.1/CP015159.1; plasmid pECO-93a:NZ_CP015161.1/CP015161.1; plasmid pECO-fce:NZ_CP015160.1/CP015160.1	-	3	5596	5217	6/16/16	2/25/17	Complete Genome	NHGRI	SAMN03455974	GCA_001663475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/475/GCA_001663475.1_ASM166347v1	-	Eco889
Escherichia coli	562	PRJNA402083	402083	Proteobacteria	Gammaproteobacteria	5.31928	50.7143	chromosome:NZ_CP023353.1/CP023353.1; plasmid p62:NZ_CP023354.1/CP023354.1; plasmid p72:NZ_CP023355.1/CP023355.1; plasmid p95:NZ_CP023356.1/CP023356.1	-	4	5508	5073	9/18/17	9/20/17	Complete Genome	The Roslin Institute	SAMN07618129	GCA_002310655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/655/GCA_002310655.1_ASM231065v1	-	746
Escherichia coli	562	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	5.01734	50.7142	chromosome:NZ_CP021732.1/CP021732.1; plasmid unitig_1:NZ_CP021733.1/CP021733.1; plasmid unitig_2:NZ_CP021734.1/CP021734.1; plasmid unitig_4:NZ_CP021735.1/CP021735.1	-	4	5221	4815	6/13/17	6/15/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014955	GCA_002192275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/275/GCA_002192275.1_ASM219227v1	-	AR_0114
Prevotella amnii DSM 23384 = JCM 14753	1122979	PRJDB583	243158	FCB group	Bacteroidetes/Chlorobi group	2.37275	36.6	-	BAJP01	159	2039	1735	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00008982	GCA_000613765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/765/GCA_000613765.1_ASM61376v1	-	JCM 14753
Prevotella timonensis 4401737 = DSM 22865 = JCM 15640	1122992	PRJDB595	243171	FCB group	Bacteroidetes/Chlorobi group	3.1164	42.5	-	BAKE01	179	2632	2063	4/1/14	4/9/17	Contig	The University of Tokyo	SAMD00009486	GCA_000614005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/005/GCA_000614005.1_ASM61400v1	-	JCM 15640
Vibrio furnissii	29494	PRJNA293803	293803	Proteobacteria	Gammaproteobacteria	4.97674	50.4	-	LKHS01	91	4589	4470	10/28/15	4/11/17	Contig	Technical University of Denmark	SAMN04009995	GCA_001418695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/695/GCA_001418695.1_ASM141869v1	-	S0821
Escherichia coli	562	PRJNA284094	284094	Proteobacteria	Gammaproteobacteria	4.74559	50.7142	chromosome:NZ_CP011495.1/CP011495.1; plasmid F:NZ_CP011496.1/CP011496.1	-	2	4933	4603	6/30/15	2/23/17	Complete Genome	University of California - San Diego	SAMN03659038	GCA_001043215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/215/GCA_001043215.1_ASM104321v1	26251500	NCM3722
Komagataeibacter xylinus	28448	PRJEB10804	316384	Proteobacteria	Alphaproteobacteria	3.3785	59.5	-	FBVP01	4	2981	2842	3/25/16	4/12/17	Scaffold	ICL-CFB	SAMEA3539690	GCA_900016225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/225/GCA_900016225.1_ATCC53582.1	-	-
Vibrio mimicus VM603	671074	PRJNA40241	40241	Proteobacteria	Gammaproteobacteria	4.35071	46.4	-	ACYU01	195	4116	3855	9/15/09	5/19/17	Contig	LNCC / UFRJ	SAMN02470247	GCA_000175975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/975/GCA_000175975.1_ASM17597v1	19860885	VM603
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	4.87428	50.7113	chromosome:NZ_CP010152.1/CP010152.1; plasmid A:NZ_CP010153.1/CP010153.1; plasmid B:NZ_CP010154.1/CP010154.1; plasmid C:NZ_CP010155.1/CP010155.1; plasmid D:NZ_CP010156.1/CP010156.1	-	5	5006	4648	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252427	GCA_001900715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/715/GCA_001900715.1_ASM190071v1	-	D9
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	4.81824	50.7082	chromosome:NZ_CP010117.1/CP010117.1; plasmid A:NZ_CP010118.1/CP010118.1	-	2	4924	4653	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252410	GCA_001900495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/495/GCA_001900495.1_ASM190049v1	-	C2
Escherichia coli SE15	431946	PRJDA19053	19053	Proteobacteria	Gammaproteobacteria	4.83968	50.7076	chromosome:NC_013654.1/AP009378.1; plasmid pECSF1:NC_013655.1/AP009379.1	-	2	4941	4651	12/15/09	2/22/17	Complete Genome	Kitasato University	SAMD00060923	GCA_000010485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/485/GCA_000010485.1_ASM1048v1	20008064	SE15
Cylindrospermopsis raciborskii CS-508	533243	PRJNA327084	327084	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.5566	40.2	-	MBQX01	162	3210	3010	11/1/16	4/13/17	Contig	Pontificia Universidad Catolica de Chile	SAMN05301155	GCA_001858115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/115/GCA_001858115.1_ASM185811v1	-	CS-508
Cronobacter turicensis	413502	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.63523	57.3	-	MSAG01	75	4487	4250	12/28/16	4/16/17	Contig	FDA/CFSAN	SAMN06100261	GCA_001922905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/905/GCA_001922905.1_ASM192290v1	-	MOD1-Sh41s
[Clostridium] innocuum	1522	PRJEB10915	297013	Terrabacteria group	Firmicutes	4.28327	44	-	CZBW01	45	4219	4033	10/1/15	4/11/17	Contig	SC	SAMEA3545319	GCA_001406695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/695/GCA_001406695.1_13470_2_72	-	2789STDY5834853
Pantoea stewartii subsp. stewartii DC283	660596	PRJNA39561	39561	Proteobacteria	Gammaproteobacteria	5.23321	53.8	-	AHIE01	65	5430	4864	2/22/12	5/19/17	Contig	"University of Wisconsin, Madison"	SAMN02472011	GCA_000248395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/395/GCA_000248395.2_ASM24839v2	22111898	DC283
Vibrio fluvialis I21563	1336753	PRJNA205119	205119	Proteobacteria	Gammaproteobacteria	4.37131	50.1	-	ASXT01	84	4110	3951	7/2/13	4/1/17	Contig	Institute of Microbial Technology	SAMN02469992	GCA_000418995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/995/GCA_000418995.1_ASM41899v1	23895343	I21563
Acinetobacter lwoffii NIPH 715	1217669	PRJNA183318	183318	Proteobacteria	Gammaproteobacteria	3.45456	42.9	-	APOT01	26	3369	3086	4/16/13	4/10/17	Scaffold	Broad Institute	SAMN01828178	GCA_000368165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/165/GCA_000368165.1_Acin_lwof_NIPH_715_V1	-	NIPH 715
Pseudoalteromonas sp. 23_GOM-1509m	1380373	PRJNA213761	213761	Proteobacteria	Gammaproteobacteria	4.06724	40.2	-	JADO01	25	3693	3570	1/10/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02584983	GCA_000518425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/425/GCA_000518425.1_ASM51842v1	-	23_GOM-1509m
Acinetobacter junii NIPH 182	1217665	PRJNA183287	183287	Proteobacteria	Gammaproteobacteria	3.31017	38.5	-	APPW01	9	3179	3047	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN01828162	GCA_000368745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/745/GCA_000368745.1_Acin_juni_NIPH_182_V1	-	NIPH 182
Acinetobacter johnsonii ANC 3681	1217662	PRJNA183284	183284	Proteobacteria	Gammaproteobacteria	3.5405	41.5	-	APPZ01	8	3394	3220	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN01087830	GCA_000368805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/805/GCA_000368805.1_Acin_john_ANC_3681_V1	-	ANC 3681
Acinetobacter calcoaceticus subsp. anitratus XM1570	1235833	PRJNA173032	173032	Proteobacteria	Gammaproteobacteria	4.10541	38.8944	plasmid pXM1:NZ_CM001802.1/CM001802.1; plasmid pXM2:NZ_CM001803.1/CM001803.1	AMXH01	27	4074	3775	2/22/13	4/1/17	Scaffold	"Beijing Institute of Genomics, Chinese Academy of Sciences"	SAMN02469349	GCA_000341835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/835/GCA_000341835.1_ASM34183v1	23599286	XM1570
Prevotella oris DSM 18711 = JCM 12252	1122989	PRJNA178048	178048	FCB group	Bacteroidetes/Chlorobi group	3.06322	43.8	-	ARIU01	46	2616	2429	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440460	GCA_000377685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/685/GCA_000377685.1_ASM37768v1	-	DSM 18711
Pseudomonas coronafaciens pv. porri	83964	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.82791	57.8	-	LJRA01	320	5547	5106	10/20/15	4/4/17	Scaffold	University of Toronto	SAMN03976299	GCA_001400915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/915/GCA_001400915.1_PpoICMP8961	-	ICMP8961
Pseudomonas savastanoi pv. glycinea	318	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.98352	57.9	-	LJQL01	430	5640	5124	10/20/15	4/4/17	Scaffold	University of Toronto	SAMN03976247	GCA_001400375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/375/GCA_001400375.1_PgyICMP2189	-	ICMP2189
Pseudomonas syringae pv. coriandricola	264453	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.84104	58.6	-	LJPZ01	425	5569	5069	10/20/15	4/4/17	Scaffold	University of Toronto	SAMN03976286	GCA_001400185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/185/GCA_001400185.1_PcdICMP12471	-	ICMP12471
Escherichia coli O83:H1 str. NRG 857C	685038	PRJNA41221	41221	Proteobacteria	Gammaproteobacteria	4.89488	50.706	chromosome:NC_017634.1/CP001855.1; plasmid pO83_CORR:NC_017659.1/CP001856.1	-	2	4686	4578	11/30/10	3/16/17	Complete Genome	Public Health Agency of Canada Laboratory for Foodborne Zoonoses	SAMN02603727	GCA_000183345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/345/GCA_000183345.1_ASM18334v1	"183,123,961,790,098,000,000,000"	NRG 857C
Acidovorax citrulli	80869	PRJNA274889	274889	Proteobacteria	Betaproteobacteria	4.90344	68.8	-	JYHM01	24	4435	4171	3/5/15	4/10/17	Scaffold	"Institute of Plant Protection, Chinese Academy of Agricultural Sciences"	SAMN03333326	GCA_000948135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/135/GCA_000948135.1_ASM94813v1	25908136	pslb65
Candidatus Liberibacter solanacearum	556287	PRJNA243548	243548	Proteobacteria	Alphaproteobacteria	1.31242	35.3	-	JMTK01	5	1199	1093	4/1/15	4/17/17	Contig	The New Zealand Institute for Plant and Food Research Ltd	SAMN02743496	GCA_000968085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/085/GCA_000968085.1_ASM96808v1	25822188	LsoNZ1
Bacteroides xylanisolvens SD CC 1b	702447	PRJEB4576	237285	FCB group	Bacteroidetes/Chlorobi group	6.48404	42	-	CBXG01	60	5289	4941	2/11/14	4/2/17	Contig	NATIONALCENTERFORGENOMERESOURCES	SAMEA3138926	GCA_000577295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/295/GCA_000577295.1_SD_CC_1b	-	-
Faecalitalea cylindroides	39483	PRJNA377666	377666	Terrabacteria group	Firmicutes	1.81199	34.7	-	NFHU01	41	1823	1742	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473743	GCA_002161475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/475/GCA_002161475.1_ASM216147v1	-	An64
Megamonas hypermegale ART12/1	657316	PRJNA39163	39163	Terrabacteria group	Firmicutes	2.20994	32.2	chromosome:FP929048.1	-	1	2173	2118	3/25/10	2/27/15	Chromosome	MetaHIT	SAMEA3138358	GCA_000209975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/209/975/GCA_000209975.1_ASM20997v1	-	ART12/1
Butyrivibrio fibrisolvens FE2007	1280700	PRJNA185717	185717	Terrabacteria group	Firmicutes	4.31544	39.7	-	AUJW01	65	3687	3541	7/10/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02440818	GCA_000424425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/425/GCA_000424425.1_ASM42442v1	-	FE2007
Aerococcus viridans	1377	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.00374	39.6	-	NBTM01	1	1850	1717	4/10/17	4/13/17	Contig	US Food and Drug Administration 	SAMN04875575	GCA_002083135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/135/GCA_002083135.1_ASM208313v1	-	FDAARGOS_249
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	4.87691	50.7008	chromosome:NZ_CP010137.1/CP010137.1; plasmid A:NZ_CP010138.1/CP010138.1; plasmid B:NZ_CP010139.1/CP010139.1	-	3	5034	4684	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252420	GCA_001900615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/615/GCA_001900615.1_ASM190061v1	-	D2
Streptococcus oralis ATCC 35037	655813	PRJNA38733	38733	Terrabacteria group	Firmicutes	1.91384	41.4	-	ADMV01	10	1867	1796	3/22/10	3/30/17	Scaffold	Baylor College of Medicine	SAMN00120580	GCA_000164095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/095/GCA_000164095.1_ASM16409v1	-	ATCC 35037
Parachlamydia acanthamoebae	83552	PRJDB1670	274624	PVC group	Chlamydiae	2.99936	38.9	-	BAWW01	72	2555	2409	2/4/15	3/22/17	Contig	Hokkaido University	SAMD00000358	GCA_000875975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/875/975/GCA_000875975.1_ASM87597v1	25643359	Bn9
Ochrobactrum intermedium	94625	PRJNA316513	316513	Proteobacteria	Alphaproteobacteria	3.9389	57.8	-	LXEK01	48	3779	3645	5/5/16	4/5/17	Contig	"Guangzhou Institute of Geochemistry, Chinese Academy of Sciences,"	SAMN04584778	GCA_001637305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/305/GCA_001637305.1_ASM163730v1	-	T
Streptomyces griseus subsp. rhodochrous	285575	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.03072	72.6	-	JOFE01	67	7071	6763	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645256	GCA_000718205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/205/GCA_000718205.1_ASM71820v1	-	NRRL B-2931
Acinetobacter nosocomialis NIPH 2119	1217670	PRJNA183322	183322	Proteobacteria	Gammaproteobacteria	3.90688	38.8	-	APOP01	1	3730	3540	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN01828182	GCA_000368085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/085/GCA_000368085.1_Acin_noso_NIPH_2119_V1	-	NIPH 2119
Corynebacterium kroppenstedtii	161879	PRJNA274886	274886	Terrabacteria group	Actinobacteria	2.51438	56.9	-	JYDD01	14	2136	2010	4/15/15	4/10/17	Contig	AC-Gen Reading Life	SAMN03333293	GCA_000971855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/855/GCA_000971855.1_Corkro_ITA205.1.0	25999560	ITA205
Ruminococcus flavefaciens	1265	PRJEB17907	353825	Terrabacteria group	Firmicutes	3.64279	44.7	-	FPJT01	41	3220	3052	11/17/16	4/11/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487832	GCA_900119535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/535/GCA_900119535.1_IMG-taxon_2606217757_annotated_assembly	-	XPD3002
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	4.93546	50.7005	chromosome:NZ_CP010143.1/CP010143.1; plasmid A:NZ_CP010144.1/CP010144.1	-	2	5078	4714	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252422	GCA_001900655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/655/GCA_001900655.1_ASM190065v1	-	D4
Escherichia coli	562	PRJNA292040	292040	Proteobacteria	Gammaproteobacteria	4.92808	50.7	chromosome:CP012378.1	-	1	4919	4824	7/31/17	7/31/17	Complete Genome	Nankai University	SAMN03960341	GCA_002237285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/285/GCA_002237285.1_ASM223728v1	-	MEM
Cardiobacterium hominis	2718	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	2.54198	59.5	-	JVAB01	192	2448	2300	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197813	GCA_001057555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/555/GCA_001057555.1_ASM105755v1	26230489	612_ETAR
Escherichia coli	562	PRJNA389489	389489	Proteobacteria	Gammaproteobacteria	4.91477	50.7	chromosome:NZ_CP022393.1/CP022393.1	-	1	5021	4712	7/17/17	7/19/17	Complete Genome	Polyu	SAMN07251590	GCA_002220215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/215/GCA_002220215.1_ASM222021v1	-	E62
Lactobacillus iners LactinV 09V1-c	879299	PRJNA52037	52037	Terrabacteria group	Firmicutes	1.31233	32.7	-	AEHO01	35	1306	1098	10/5/10	3/30/17	Contig	J. Craig Venter Institute	SAMN00115038	GCA_000149085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/149/085/GCA_000149085.2_ASM14908v1	-	LactinV 09V1-c
Helicobacter bilis ATCC 51630	1408441	PRJNA223061	223061	Proteobacteria	delta/epsilon subdivisions	2.47517	34.9	-	JMKW01	129	2341	2112	5/8/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02743350	GCA_000686565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/565/GCA_000686565.1_ASM68656v1	-	ATCC 51630
Rhodococcus hoagii NBRC 101255 = C 7	1219013	PRJDB292	172260	Terrabacteria group	Actinobacteria	5.19659	68.8	-	BCRL01	48	4879	4725	2/6/16	6/6/17	Contig	National Institute of Technology and Evaluation	SAMD00046489	GCA_001552575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/575/GCA_001552575.1_ASM155257v1	-	NBRC 101255
Oxalobacter formigenes OXCC13	556269	PRJNA32499	32499	Proteobacteria	Betaproteobacteria	2.43677	49.6	-	ACDQ01	9	2258	2170	3/2/09	4/7/17	Scaffold	Broad Institute	SAMN02463717	GCA_000158495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/495/GCA_000158495.1_ASM15849v1	-	OXCC13
Roseburia inulinivorans	360807	PRJEB9322	298151	Terrabacteria group	Firmicutes	3.78113	41	-	CVRS01	151	3534	3329	10/8/15	4/11/17	Contig	WTSI	SAMEA1710343	GCA_001406855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/855/GCA_001406855.1_RIL183	-	L1-83
Hungatella hathewayi VE202-11	1232451	PRJDB530	219220	Terrabacteria group	Firmicutes	7.23494	49	-	BAHY01	207	6757	4910	9/14/13	4/2/17	Contig	The University of Tokyo	SAMD00003121	GCA_000471805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/805/GCA_000471805.1_ASM47180v1	-	VE202-11
Bifidobacterium catenulatum	1686	PRJNA379831	379831	Terrabacteria group	Actinobacteria	2.1246	56.3	-	NAQA01	14	1814	1669	3/31/17	4/6/17	Contig	University of Parma	SAMN06621717	GCA_002075855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/855/GCA_002075855.1_Bbif1899B	-	1899B
Corynebacterium aurimucosum	169292	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.4377	59.4	-	JUOH01	115	2335	2230	7/10/15	4/3/17	Contig	University of Washington	SAMN03198119	GCA_001059565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/565/GCA_001059565.1_ASM105956v1	26230489	911_CAUR
Corynebacterium striatum	43770	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.78499	59.4	-	JVBA01	184	2564	2395	7/10/15	4/3/17	Contig	University of Washington	SAMN03197788	GCA_001055405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/405/GCA_001055405.1_ASM105540v1	26230489	587_CAUR
Eikenella corrodens	539	PRJNA310649	310649	Proteobacteria	Betaproteobacteria	2.20305	55.9	-	LXSF01	12	2241	2147	5/19/16	4/5/17	Contig	Public Health Agency of Canada	SAMN04931630	GCA_001648235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/235/GCA_001648235.1_ASM164823v1	-	NML01-0328
Staphylococcus warneri A487	904143	PRJEA53353	53353	Terrabacteria group	Firmicutes	2.52325	32.5	-	CANQ01	71	2475	2362	11/19/12	3/31/17	Contig	University of Manchester School of Medicine	SAMEA2272129	GCA_000321085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/085/GCA_000321085.1_ASM32108v1	21539624	A487
Acinetobacter radioresistens SK82	596318	PRJNA34081	34081	Proteobacteria	Gammaproteobacteria	3.2837	41.5	-	ACVR01	82	3178	3041	8/5/09	3/30/17	Contig	J. Craig Venter Institute	SAMN00001943	GCA_000175675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/675/GCA_000175675.1_ASM17567v1	-	SK82
Staphylococcus capitis CR01	1296619	PRJEB1494	198457	Terrabacteria group	Firmicutes	2.50377	32.8	-	CBUB01	8	2419	2298	10/30/13	4/2/17	Scaffold	HOSPICES CIVILS DE LYON	SAMEA3138827	GCA_000499705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/705/GCA_000499705.1_ScapHOJ_3778_PRJEB1494	-	CR01
Bacteroides cellulosilyticus	246787	PRJNA257716	257716	FCB group	Bacteroidetes/Chlorobi group	5.20646	43.1	-	LTZL01	52	4623	4355	3/3/16	4/12/17	Scaffold	The Genome Institute at Washington University	SAMN04024977	GCA_001580105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/105/GCA_001580105.1_ASM158010v1	-	KLE1257
Roseburia intestinalis XB6B4	718255	PRJNA45953	45953	Terrabacteria group	Firmicutes	4.28629	42.8	chromosome:FP929050.1	-	1	3699	3630	3/25/10	2/27/15	Chromosome	metaHIT	SAMEA3138374	GCA_000210655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/655/GCA_000210655.1_ASM21065v1	-	XB6B4
Enterobacter cancerogenus	69218	PRJNA278227	278227	Proteobacteria	Gammaproteobacteria	4.88413	55.6	-	LDQG01	52	4728	4521	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401392	GCA_001475535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/535/GCA_001475535.1_ASM147553v1	26793183	NS104
Actinomyces urogenitalis DORA_12	1403939	PRJNA221484	221484	Terrabacteria group	Actinobacteria	2.60442	68.4	-	AZLV01	1167	3034	3034	12/16/13	12/16/13	Contig	"University of California, Berkeley"	SAMN02316559	GCA_000508425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/425/GCA_000508425.1_ActUrg_DORA_12_velvet_1.1	-	-
Mobiluncus curtisii subsp. holmesii ATCC 35242	887899	PRJNA52991	52991	Terrabacteria group	Actinobacteria	2.09878	55.6	-	AEPZ01	5	1821	1742	12/27/10	4/7/17	Scaffold	Baylor College of Medicine	SAMN00253295	GCA_000185445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/445/GCA_000185445.1_ASM18544v1	-	ATCC 35242
Capnocytophaga sputigena ATCC 33612	553177	PRJNA30997	30997	FCB group	Bacteroidetes/Chlorobi group	2.99784	38.4	-	ABZV01	65	2742	2621	11/21/08	4/7/17	Contig	J. Craig Venter Institute	SAMN00000681	GCA_000173675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/675/GCA_000173675.1_ASM17367v1	-	Capno
Staphylococcus hominis VCU122	904339	PRJNA53761	53761	Terrabacteria group	Firmicutes	2.23217	31.6	-	AHLD01	70	2220	2087	2/7/12	3/30/17	Contig	J. Craig Venter Institute	SAMN00116834	GCA_000247085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/085/GCA_000247085.2_ASM24708v2	-	VCU122
Escherichia coli	562	PRJNA338095	338095	Proteobacteria	Gammaproteobacteria	5.24444	50.7	chromosome:NZ_CP016828.1/CP016828.1	-	1	5493	5102	7/5/17	8/31/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN05520965	GCA_002214745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/745/GCA_002214745.1_ASM221474v1	-	FORC_043
Neisseria sicca VK64	1095748	PRJNA75141	75141	Proteobacteria	Betaproteobacteria	2.63845	51.2	-	AJMT01	210	2723	2465	4/30/12	8/4/17	Contig	J. Craig Venter Institute	SAMN00761806	GCA_000260655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/655/GCA_000260655.1_NsiccaVK64v1.0	-	VK64
Neisseria flavescens	484	PRJNA274665	274665	Proteobacteria	Betaproteobacteria	2.33302	48.8	-	LAEJ01	37	2361	2144	4/8/16	8/8/17	Contig	university of milan	SAMN03329002	GCA_001618075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/075/GCA_001618075.1_ASM161807v1	-	CD-NF3
Neisseria elongata subsp. glycolytica	88719	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	2.40428	53.8	-	JVIM01	78	2415	2202	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197594	GCA_001064875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/875/GCA_001064875.1_ASM106487v1	26230489	404_NMEN
Bacteroides coprophilus DSM 18228 = JCM 13818	547042	PRJDB1138	245972	FCB group	Bacteroidetes/Chlorobi group	3.87632	45.7	-	BBIJ01	164	3467	2670	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00017010	GCA_001315785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/785/GCA_001315785.1_ASM131578v1	-	JCM 13818
Providencia rettgeri	587	PRJNA395387	395387	Proteobacteria	Gammaproteobacteria	5.25708	40.6	-	NOWC01	95	5064	4852	8/22/17	8/24/17	Scaffold	Washington University	SAMN07376394	GCA_002265395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/395/GCA_002265395.1_ASM226539v1	-	PR1
Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505	547043	PRJNA239855	239855	Terrabacteria group	Actinobacteria	2.28377	56.4	-	JGZF01	10	1876	1700	8/18/14	4/2/17	Contig	University of Parma	SAMN02673443	GCA_000741685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/685/GCA_000741685.1_Bifpsetum	"2,508,549,325,107,960"	LMG 10505
Providencia alcalifaciens PAL-3	1256993	PRJNA181049	181049	Proteobacteria	Gammaproteobacteria	4.0878	42.4	-	AZYZ01	50	3850	3719	1/13/14	4/2/17	Contig	JCVI	SAMN02597446	GCA_000517745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/745/GCA_000517745.1_PalPAL3v1.0	-	PAL-3
Bifidobacterium angulatum	1683	PRJNA239835	239835	Terrabacteria group	Actinobacteria	2.00381	59.4	-	JGYL01	6	1615	1498	8/18/14	4/9/17	Contig	University of Parma	SAMN02673423	GCA_000741065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/065/GCA_000741065.1_Bifang	"2,508,549,325,107,960"	LMG 11039
Rothia dentocariosa	2047	PRJNA246626	246626	Terrabacteria group	Actinobacteria	2.63944	56.5	-	JPVS01	31	2338	2224	10/6/14	4/2/17	Contig	University of Malaya	SAMN02954007	GCA_000763765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/765/GCA_000763765.1_ASM76376v1	-	C6D
Atopobium vaginae	82135	PRJNA288564	288564	Terrabacteria group	Actinobacteria	1.4833	42.7	-	LFWE01	41	1268	1110	7/8/15	4/10/17	Contig	Medical Diagnostic Laboratories	SAMN03801594	GCA_001049775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/775/GCA_001049775.1_ASM104977v1	26337886	44061
Prevotella melaninogenica DNF00666	1401073	PRJNA219671	219671	FCB group	Bacteroidetes/Chlorobi group	2.97625	41.4	-	JRNS01	553	2399	2172	9/26/14	4/9/17	Contig	J. Craig Venter Institute	SAMN02850972	GCA_000759305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/305/GCA_000759305.1_04_NF40_HMP661v01	-	DNF00666
Peptostreptococcus anaerobius	1261	PRJNA272087	272087	Terrabacteria group	Firmicutes	2.02334	35.8	-	LSQZ01	65	1860	1771	2/18/16	4/4/17	Scaffold	The Genome Institute at Washington University	SAMN03854410	GCA_001563595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/595/GCA_001563595.1_ASM156359v1	-	MJR8628A
Prevotella bivia JCVIHMP010	553171	PRJNA31377	31377	FCB group	Bacteroidetes/Chlorobi group	2.42443	39.8	-	ADFO01	121	2112	1980	12/30/09	3/30/17	Contig	J. Craig Venter Institute	SAMN00008342	GCA_000177315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/315/GCA_000177315.1_ASM17731v1	-	JCVIHMP010
Escherichia coli	562	PRJNA355857	355857	Proteobacteria	Gammaproteobacteria	4.85546	50.7	chromosome:NZ_CP018323.1/CP018323.1	-	1	5020	4675	6/2/17	6/5/17	Complete Genome	University of Guelph	SAMN06093946	GCA_002163655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/655/GCA_002163655.1_ASM216365v1	-	9
Mobiluncus mulieris 28-1	596328	PRJNA34103	34103	Terrabacteria group	Actinobacteria	2.45238	55.1	-	ADBR01	55	2281	2135	11/25/09	4/7/17	Contig	J. Craig Venter Institute	SAMN00002501	GCA_000176775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/775/GCA_000176775.1_ASM17677v1	-	28-1
Bacteroides dorei CL02T00C15	997875	PRJNA64805	64805	FCB group	Bacteroidetes/Chlorobi group	6.07958	42.2	-	AGXH01	22	5381	5050	6/25/12	5/18/17	Scaffold	Broad Institute	SAMN02463918	GCA_000273035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/035/GCA_000273035.1_Bact_dore_CL02T00C15_V1	-	CL02T00C15
Lactobacillus ruminis ATCC 25644	525362	PRJNA71361	71361	Terrabacteria group	Firmicutes	2.06908	43.7	-	AFYE01	100	2111	1977	9/12/11	3/30/17	Contig	"Microbiology Dept, University College Cork"	SAMN02471467	GCA_000225845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/845/GCA_000225845.2_ASM22584v2	21995554	ATCC 25644
Lactobacillus jensenii 27-2-CHN	575606	PRJNA37953	37953	Terrabacteria group	Firmicutes	1.63946	34.1	-	ACOF02	4	1597	1472	8/24/09	4/2/17	Scaffold	Broad Institute	SAMN02463727	GCA_000161895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/895/GCA_000161895.2_Lacto_jen_27-2-CHN_V2	-	27-2-CHN
Bacteroides finegoldii	338188	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	4.41847	42.2	-	CYZH01	40	3553	3335	10/1/15	4/11/17	Contig	SC	SAMEA3545248	GCA_001404475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/475/GCA_001404475.1_13414_6_24	-	2789STDY5608840
Acidithiobacillus caldus	33059	PRJNA325706	325706	Proteobacteria	Acidithiobacillia	3.12221	61	-	LZYE01	390	3179	2861	10/11/16	4/5/17	Contig	Central South University	SAMN05250856	GCA_001756675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/675/GCA_001756675.1_ASM175667v1	27999570	DX
Aggregatibacter aphrophilus F0387	679198	PRJNA40689	40689	Proteobacteria	Gammaproteobacteria	2.26269	42.2	-	ACZJ01	12	2176	2056	10/19/11	3/30/17	Scaffold	Broad Institute	SAMN02463811	GCA_000231255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/255/GCA_000231255.1_Aggr_aphr_F0387_V1	-	F0387
Escherichia coli	562	PRJNA373816	373816	Proteobacteria	Gammaproteobacteria	5.11192	50.7	chromosome:NZ_CP019778.1/CP019778.1	-	1	5251	4813	2/28/17	3/2/17	Complete Genome	National University of Singapore and Genome Institute of Singapore	SAMN06314933	GCA_002007705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/705/GCA_002007705.1_ASM200770v1	-	NCTC86
Staphylococcus carnosus	1281	PRJNA254477	254477	Terrabacteria group	Firmicutes	2.6699	34.4	-	LISV01	24	2635	2464	8/31/15	4/11/17	Contig	Canadian Food Inspection Agency	SAMN03998523	GCA_001276205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/205/GCA_001276205.1_ASM127620v1	-	336
Fusobacterium periodonticum D10	620833	PRJNA34699	34699	Fusobacteria	Fusobacteriia	2.57402	28.8	-	ACIF01	150	2488	2102	9/17/12	4/8/17	Scaffold	Broad Institute	SAMN02463721	GCA_000297655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/655/GCA_000297655.1_Fuso_PO_Taxon_201_D10_V1	-	D10
Acidaminococcus fermentans	905	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.06813	56.7	-	DCJM01	62	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451237	GCA_002320055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/055/GCA_002320055.1_ASM232005v1	28894102	-
Streptomyces viridochromogenes	1938	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.2813	70.4	-	LGUQ01	307	9109	8477	8/19/15	3/11/17	Contig	University of Illinois	SAMN02900583	GCA_001270485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/485/GCA_001270485.1_P006IDBA	-	NRRL 3416
Escherichia coli	562	PRJNA356505	356505	Proteobacteria	Gammaproteobacteria	4.7922	50.7	chromosome:NZ_CP018801.1/CP018801.1	-	1	4980	4637	1/3/17	2/26/17	Complete Genome	Helmholtz-Centre for Infection Research	SAMN06115651	GCA_001932515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/515/GCA_001932515.1_ASM193251v1	-	tolC-
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	4.83323	50.7	chromosome:NZ_CP010169.1/CP010169.1	-	1	4935	4616	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252432	GCA_001900415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/415/GCA_001900415.1_ASM190041v1	-	H5
Escherichia fergusonii	564	PRJNA277436	277436	Proteobacteria	Gammaproteobacteria	4.64475	49.9	-	JZWP02	39	4694	4445	4/3/15	2/25/17	Contig	Canadian Food Inspection Agency	SAMN03400068	GCA_000968885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/885/GCA_000968885.2_ASM96888v2	27081122	GTA-EF04
Thermoanaerobacterium thermosaccharolyticum	1517	PRJNA392005	392005	Terrabacteria group	Firmicutes	2.63585	33.9	-	NKHD01	77	2622	2439	8/1/17	8/3/17	Contig	Nanjing Tech University	SAMN07280108	GCA_002238085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/085/GCA_002238085.1_ASM223808v1	-	M5
Acidovorax delafieldii	47920	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	2.40355	63.8	-	DCVY01	265	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455575	GCA_002327945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/945/GCA_002327945.1_ASM232794v1	28894102	-
Vulcanisaeta distributa JCM 11213	1295123	PRJDB828	243734	TACK group	Crenarchaeota	2.42431	45.4	-	BBCS01	28	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000514	GCA_001316125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/125/GCA_001316125.1_ASM131612v1	-	JCM 11213
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	4.83257	50.7	chromosome:NZ_CP010170.1/CP010170.1	-	1	4929	4615	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252433	GCA_001900435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/435/GCA_001900435.1_ASM190043v1	-	H6
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	4.63237	50.7	chromosome:NZ_CP010228.1/CP010228.1	-	1	4773	4480	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252450	GCA_001900905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/905/GCA_001900905.1_ASM190090v1	-	S3
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	4.98172	50.7	chromosome:NZ_CP010238.1/CP010238.1; plasmid A:NZ_CP010239.1/CP010239.1	-	2	5239	4873	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252457	GCA_001901405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/405/GCA_001901405.1_ASM190140v1	-	S50
Rothia mucilaginosa M508	563033	PRJNA38789	38789	Terrabacteria group	Actinobacteria	2.31327	59.4	-	ACSB01	8	1834	1756	10/19/11	3/30/17	Scaffold	Broad Institute	SAMN02463763	GCA_000231235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/235/GCA_000231235.1_Roth_muci_M508_V1	-	M508
Escherichia coli	562	PRJNA321067	321067	Proteobacteria	Gammaproteobacteria	4.86715	50.7	chromosome:NZ_CP016628.1/CP016628.1	-	1	5006	4643	11/28/16	2/25/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN04965119	GCA_001886935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/935/GCA_001886935.1_ASM188693v1	-	FORC_041
Lactobacillus crispatus 125-2-CHN	575595	PRJNA38361	38361	Terrabacteria group	Firmicutes	2.30525	37.5	-	ACPV01	30	2166	2024	8/24/09	3/30/17	Scaffold	Broad Institute	SAMN02463740	GCA_000162255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/255/GCA_000162255.1_ASM16225v1	-	125-2-CHN
Pectobacterium wasabiae	55208	PRJNA258525	258525	Proteobacteria	Gammaproteobacteria	5.01062	50.5	-	JQOH01	94	4688	4468	9/15/14	4/9/17	Contig	Food and Environment Research Agency	SAMN03010635	GCA_000754685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/685/GCA_000754685.1_ASM75468v1	-	NCPPB3702
Dickeya zeae CSL RW192	1223567	PRJNA172883	172883	Proteobacteria	Gammaproteobacteria	4.70177	53.3925	chromosome:NZ_CM001972.1/CM001972.1	AONY01	4	4259	4078	6/4/13	4/1/17	Chromosome	James Hutton Institute	SAMN02470093	GCA_000406045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/045/GCA_000406045.1_DZERW192_1.0	24265502	CSL RW192
Brachyspira hyodysenteriae	159	PRJNA272555	272555	Spirochaetes	Spirochaetia	2.99363	27	-	JXNJ01	118	2603	2472	5/26/15	4/3/17	Contig	Murdoch University	SAMN03285451	GCA_001013165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/013/165/GCA_001013165.1_ASM101316v1	26098837	FM88.90
Candidatus Hamiltonella defensa (Bemisia tabaci)	672795	PRJEB7127	281188	Proteobacteria	Gammaproteobacteria	1.72632	40.1	-	CCVN01	183	1674	1451	4/15/15	4/10/17	Contig	Genoscope CEA	SAMEA2738363	GCA_000983015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/015/GCA_000983015.1_AQE_PRJEB7127_v1	25714744	-
Teredinibacter turnerae T8402	1073969	PRJNA183358	183358	Proteobacteria	Gammaproteobacteria	5.16613	50.9	-	ARMG01	27	4282	4148	4/23/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02440489	GCA_000381645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/645/GCA_000381645.1_ASM38164v1	-	T8402
Mycobacterium kansasii	1768	PRJNA374853	374853	Terrabacteria group	Actinobacteria	6.44078	66.1	chromosome:NZ_CP019884.1/CP019884.1	-	1	5778	5342	4/11/17	4/13/17	Chromosome	University of Lodz	SAMN06339042	GCA_002085645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/645/GCA_002085645.1_ASM208564v1	-	4MK
Escherichia coli	562	PRJEB14041	329059	Proteobacteria	Gammaproteobacteria	5.14425	50.7	chromosome I:NZ_LT601384.1/LT601384.1	-	1	5289	4756	7/21/16	2/25/17	Complete Genome	kxd419	SAMEA3988096	GCA_900092615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/615/GCA_900092615.1_PRJEB14041	-	-
Zhongshania aliphaticivorans	1470434	PRJNA306719	306719	Proteobacteria	Gammaproteobacteria	4.20436	50.7	chromosome:NZ_CP014544.1/CP014544.1	-	1	3812	3688	3/10/16	4/12/17	Complete Genome	Chung-Ang University	SAMN04361929	GCA_001586255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/255/GCA_001586255.1_ASM158625v1	-	SM2
Streptococcus equinus B315	1280690	PRJNA185690	185690	Terrabacteria group	Firmicutes	1.78667	37.2	-	AUJD01	9	1730	1677	7/10/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02440831	GCA_000424045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/045/GCA_000424045.1_ASM42404v1	-	B315
Rhodococcus opacus PD630	543736	PRJNA30413	30413	Terrabacteria group	Actinobacteria	9.26733	66.8	-	AGVD01	282	8448	7910	11/4/11	5/19/17	Scaffold	Broad Institute	SAMN02596738	GCA_000234335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/335/GCA_000234335.1_ASM23433v1	21931557	PD630
Yersinia rohdei	29485	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.3912	46.9	-	CTKE01	46	4013	3812	3/26/15	4/10/17	Scaffold	SC	SAMEA859954	GCA_001217805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/805/GCA_001217805.1_4840_8_6	-	68/02
Yersinia aldovae	29483	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	4.55387	47.6	-	CQEH01	98	4290	4004	3/23/15	4/10/17	Contig	SC	SAMEA1486450	GCA_001139945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/945/GCA_001139945.1_8016_2_90	-	IP08791
Borrelia hermsii DAH	314723	PRJNA29637	29637	Spirochaetes	Spirochaetia	1.06622	30.1914	chromosome:NC_010673.1/CP000048.1	-	11	1016	925	12/22/06	3/30/17	Chromosome	"Rocky Mountain Laboratories, NIAID, NIH"	SAMN02641559	GCA_000012065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/065/GCA_000012065.2_ASM1206v2	-	DAH
Yersinia ruckeri ATCC 29473	527005	PRJNA243513	243513	Proteobacteria	Gammaproteobacteria	3.77281	47.4	-	JPPT01	2	3462	3273	9/15/14	4/2/17	Scaffold	Los Alamos National Laboratory	SAMN02940942	GCA_000754815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/815/GCA_000754815.1_YRC	25342679	ATCC 29473
Escherichia coli	562	PRJNA239653	239653	Proteobacteria	Gammaproteobacteria	4.87993	50.7	chromosome:NZ_CP007491.1/CP007491.1	-	1	5010	4653	1/15/16	2/25/17	Complete Genome	Huazhong Agricultural University	SAMN04385793	GCA_001515725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/725/GCA_001515725.1_ASM151572v1	-	ACN002
Corynebacterium urealyticum	43771	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.62504	58.8	-	JWEP01	81	2307	2216	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197019	GCA_001053765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/765/GCA_001053765.1_ASM105376v1	26230489	1055_CURE
Caldicellulosiruptor bescii	31899	PRJNA371182	371182	Terrabacteria group	Firmicutes	2.91097	35.2	-	NSHB01	1	2827	2580	9/13/17	9/15/17	Contig	DOE Joint Genome Institute	SAMN06296428	GCA_002300375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/375/GCA_002300375.1_ASM230037v1	-	RKCB125
Butyrivibrio proteoclasticus FD2007	1408431	PRJNA223016	223016	Terrabacteria group	Firmicutes	3.88004	40.3	-	JHYH01	43	3312	3180	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743991	GCA_000621465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/465/GCA_000621465.1_ASM62146v1	-	FD2007
Brevibacillus brevis	1393	PRJNA284861	284861	Terrabacteria group	Firmicutes	6.42633	47.4	-	LDZV01	3	6078	5747	6/24/15	4/10/17	Contig	Shandong Agricultural University	SAMN03733595	GCA_001039275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/275/GCA_001039275.1_ASM103927v1	26294619	DZQ7
[Eubacterium] rectale	39491	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.70887	41.4	-	CYXM01	69	3614	3372	10/1/15	4/4/17	Contig	SC	SAMEA3545431	GCA_001406375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/375/GCA_001406375.1_14207_7_91	-	2789STDY5834968
Candidatus Riesia pediculicola	401619	PRJNA295781	295781	Proteobacteria	Gammaproteobacteria	0.58185	32.1558	chromosome:CP012845.1; plasmid ppan:CP012844.1	-	2	609	80	3/29/17	3/29/17	Chromosome	University of Illinois Urbana-Champaign	SAMN04088562	GCA_002073935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/935/GCA_002073935.1_ASM207393v1	-	HHAN
Lactobacillus buchneri DSM 20057	1423728	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.44666	44.4	-	AZDM01	90	2357	2228	11/6/15	4/11/17	Contig	Shanghai Majorbio	SAMN02369438	GCA_001434735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/735/GCA_001434735.1_ASM143473v1	26415554	DSM 20057
Escherichia coli ACN001	1311757	PRJNA194515	194515	Proteobacteria	Gammaproteobacteria	4.93658	50.7	chromosome:NZ_CP007442.1/CP007442.1	-	1	5066	4703	7/9/15	2/23/17	Complete Genome	Huazhong Agricultural University	SAMN03852615	GCA_001051135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/135/GCA_001051135.1_ASM105113v1	26823959	ACN001
Edwardsiella tarda ATCC 23685	500638	PRJNA28661	28661	Proteobacteria	Gammaproteobacteria	3.74457	56.8	-	ADGK01	87	3554	3184	1/27/10	3/30/17	Scaffold	Washington University Genome Sequencing Center	SAMN00000732	GCA_000163955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/955/GCA_000163955.1_ASM16395v1	-	ATCC 23685
Anoxybacillus flavithermus TNO-09.006	1267580	PRJNA169174	169174	Terrabacteria group	Firmicutes	2.65842	41.8	-	AMCM01	1	2879	2504	12/20/12	3/31/17	Scaffold	CMBI	SAMN02471214	GCA_000327465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/465/GCA_000327465.1_Anoxybacillus_flavithermus_TNO-09.006_v1	23469333	TNO-09.006
Kocuria rhizophila	72000	PRJNA269640	269640	Terrabacteria group	Actinobacteria	2.7017	70.6	-	JWTC01	46	2342	2254	1/2/15	4/10/17	Contig	University of Malaya	SAMN03256206	GCA_000813865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/865/GCA_000813865.1_ASM81386v1	27326264	TPW45
Sorangium cellulosum	56	PRJNA237846	237846	Proteobacteria	delta/epsilon subdivisions	14.1395	71.1	-	JEME01	3428	10886	9324	3/11/16	3/11/16	Contig	Shandong University	SAMN02639851	GCA_001589215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/589/215/GCA_001589215.1_sce703.1	-	So0007-03
Escherichia coli	562	PRJNA239361	239361	Proteobacteria	Gammaproteobacteria	5.00278	50.7	chromosome:NZ_CP007275.1/CP007275.1	-	1	5147	4832	6/8/15	6/24/17	Complete Genome	Iowa State University	SAMN02666437	GCA_001021595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/595/GCA_001021595.1_ASM102159v1	-	NMEC O18
Xanthomonas albilineans	29447	PRJNA270058	270058	Proteobacteria	Gammaproteobacteria	3.81135	62.8	-	JZIA01	4	3304	3031	3/25/15	4/3/17	Contig	CIRAD	SAMN03262650	GCA_000962935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/935/GCA_000962935.1_Xal-GPE_PC17-G1	-	GPE PC17
Escherichia coli APEC O18	1401688	PRJNA219414	219414	Proteobacteria	Gammaproteobacteria	5.00657	50.7	chromosome:NZ_CP006830.1/CP006830.1	-	1	5149	4850	6/8/15	6/24/17	Complete Genome	Iowa State University	SAMN03761813	GCA_001021615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/615/GCA_001021615.1_APECO18	-	APEC O18
Pseudoalteromonas haloplanktis	228	PRJNA306252	306252	Proteobacteria	Gammaproteobacteria	3.97463	40	-	LQXI01	16	3637	3494	12/29/16	4/6/17	Contig	Duke University Marine Lab	SAMN04348898	GCA_001924935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/924/935/GCA_001924935.1_ASM192493v1	-	ATCC 700530
Escherichia coli KLY	1435461	PRJNA229104	229104	Proteobacteria	Gammaproteobacteria	4.71854	50.7	chromosome:NZ_CP008801.1/CP008801.1	-	1	4864	4539	7/14/14	2/23/17	Complete Genome	Hebrew University - Balaban's Lab	SAMN02440167	GCA_000725305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/305/GCA_000725305.1_ASM72530v1	25043002	KLY
Geobacillus kaustophilus	1462	PRJNA260741	260741	Terrabacteria group	Firmicutes	3.51357	51.8	-	JYCF01	142	3715	3431	3/5/15	4/10/17	Contig	Los Alamos National Laboratory	SAMN03025779	GCA_000948165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/165/GCA_000948165.1_BFA_3_A	-	Et2/3
Paracoccus denitrificans JCM 21484	1302247	PRJDB921	245951	Proteobacteria	Alphaproteobacteria	4.07985	65.4	-	BBFH01	2047	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016947	GCA_001313145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/145/GCA_001313145.1_ASM131314v1	-	JCM 21484
Prevotella ruminicola	839	PRJEB16647	349925	FCB group	Bacteroidetes/Chlorobi group	3.77386	47.6	-	FNRF01	10	3105	3009	10/22/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216462	GCA_900107775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/775/GCA_900107775.1_IMG-taxon_2654588193_annotated_assembly	-	D31d
Bdellovibrio bacteriovorus	959	PRJNA246120	246120	Proteobacteria	Oligoflexia	3.83043	50.7	chromosome:NZ_CP007656.1/CP007656.1	-	1	3662	3605	5/15/14	4/2/17	Complete Genome	Hebrew University of Jerusalem	SAMN02743506	GCA_000691605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/605/GCA_000691605.1_ASM69160v1	21209874	109J
Bdellovibrio bacteriovorus	959	PRJNA313393	313393	Proteobacteria	Oligoflexia	3.92627	45.4	-	LUKE01	9	3794	3725	3/15/16	9/18/17	Scaffold	Hebrew University of Jerusalem	SAMN04521035	GCA_001592735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/735/GCA_001592735.1_ASM159273v1	-	R0
Escherichia coli	562	PRJNA238952	238952	Proteobacteria	Gammaproteobacteria	5.05451	50.7	chromosome:NZ_CP007392.1/CP007392.1	-	1	5101	4751	3/19/14	2/23/17	Complete Genome	University of Antwerpen	SAMN02666696	GCA_000599665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/665/GCA_000599665.1_ASM59966v1	24723707	ST2747
Akkermansia muciniphila	239935	PRJEB6027	243579	PVC group	Verrucomicrobia	2.55761	56	-	CCDQ01	58	2291	2118	5/16/14	4/9/17	Contig	URMITE	SAMEA3139045	GCA_000723745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/745/GCA_000723745.1_PRJEB6027_Urmite	-	-
Escherichia coli	562	PRJNA238952	238952	Proteobacteria	Gammaproteobacteria	4.99891	50.7	chromosome:NZ_CP007393.1/CP007393.1	-	1	5075	4710	3/19/14	11/27/16	Complete Genome	University of Antwerpen	SAMN02666697	GCA_000599685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/685/GCA_000599685.1_ASM59968v1	24723707	ST2747
Escherichia coli APEC O78	1274814	PRJNA184588	184588	Proteobacteria	Gammaproteobacteria	4.79843	50.7	chromosome:NC_020163.1/CP004009.1	-	1	4975	4641	1/23/13	2/22/17	Complete Genome	Iowa State University	SAMN02603426	GCA_000332755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/755/GCA_000332755.1_ASM33275v1	23516182	APEC O78
Clostridium sp. SY8519	1042156	PRJDA67799	67799	Terrabacteria group	Firmicutes	2.83574	50.7	chromosome:NC_015737.1/AP012212.1	-	1	2643	2525	7/1/11	4/17/17	Complete Genome	"Gifu University, United Graduate School of Agricultural Science"	SAMD00060994	GCA_000270305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/305/GCA_000270305.1_ASM27030v1	21914882	SY8519
Caldanaerobacter subterraneus	911092	PRJNA278302	278302	Terrabacteria group	Firmicutes	2.06092	37.9	-	LGEY01	168	2190	2190	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445124	GCA_001507995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/995/GCA_001507995.1_ASM150799v1	26787827	-
Acholeplasma laidlawii	2148	PRJNA325216	325216	Terrabacteria group	Tenericutes	1.48846	31.8	-	LZGE01	19	1465	1384	9/16/16	4/13/17	Contig	Kazan Institute of Biochemistry and Biophysics KazSC RAS	SAMN05225429	GCA_001729655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/655/GCA_001729655.1_ASM172965v1	-	PG8S
Labrenzia aggregata	187304	PRJNA272652	272652	Proteobacteria	Alphaproteobacteria	6.43107	59.1	-	JXMT01	181	5910	5775	1/4/17	4/17/17	Contig	Ocean University of China	SAMN03284751	GCA_001932055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/055/GCA_001932055.1_ASM193205v1	-	LZB033
Geobacillus thermodenitrificans subsp. thermodenitrificans DSM 465	1413215	PRJNA224955	224955	Terrabacteria group	Firmicutes	3.40055	49	-	AYKT01	76	3437	3263	11/12/13	4/9/17	Contig	Nankai university	SAMN02386948	GCA_000496575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/575/GCA_000496575.1_DSM465V1.0	24336381	DSM 465
Finegoldia magna ACS-171-V-Col3	768713	PRJNA49435	49435	Terrabacteria group	Firmicutes	1.82875	32	-	AECM01	30	1758	1682	8/5/10	3/30/17	Contig	J. Craig Venter Institute	SAMN00100752	GCA_000179495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/495/GCA_000179495.1_ASM17949v1	-	ACS-171-V-Col3
Escherichia coli IHE3034	714962	PRJNA43693	43693	Proteobacteria	Gammaproteobacteria	5.10838	50.7	chromosome:NC_017628.1/CP001969.1	-	1	5304	4988	4/12/10	2/22/17	Complete Genome	IGS	SAMN02603334	GCA_000025745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/745/GCA_000025745.1_ASM2574v1	20439758	IHE3034
Pseudomonas mendocina ZWU0006	1339237	PRJNA205583	205583	Proteobacteria	Gammaproteobacteria	5.35375	64.9	-	JTLK01	460	5382	4659	12/8/14	4/2/17	Scaffold	University of Oregon	SAMN03021534	GCA_000798915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/915/GCA_000798915.1_ZWU0006.1	-	ZWU0006
Escherichia coli LF82	591946	PRJNA33825	33825	Proteobacteria	Gammaproteobacteria	4.77311	50.7	chromosome:NC_011993.1/CU651637.1	-	1	4855	4586	1/23/09	2/22/17	Complete Genome	Genoscope	SAMEA3138414	GCA_000284495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/495/GCA_000284495.1_ASM28449v1	-	LF82
Haloquadratum walsbyi J07HQW2	1238425	PRJNA176225	176225	Euryarchaeota	Halobacteria	3.59454	48	-	ARPY01	1	3905	3853	6/26/13	9/4/13	Scaffold	"University of California, San Diego, Scripps Institution of Oceanography"	SAMN01940911	GCA_000415985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/985/GCA_000415985.1_HQW2_08err_032412a	23637883	-
Thermosipho melanesiensis	46541	PRJNA231770	231770	Thermotogae	Thermotogae	1.90605	31.3	-	JYCX01	4	1976	1877	2/13/17	4/6/17	Contig	University of Oslo	SAMN03284847	GCA_001999555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/555/GCA_001999555.1_ASM199955v1	-	430
Campylobacter concisus UNSW3	1242966	PRJNA177553	177553	Proteobacteria	delta/epsilon subdivisions	1.90702	39.6	-	ANNE01	61	1963	1853	9/13/13	4/1/17	Contig	The University of New South Wales	SAMN02471187	GCA_000466645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/645/GCA_000466645.1_UNSW3	23984967	UNSW3
Escherichia coli 55989	585055	PRJNA33413	33413	Proteobacteria	Gammaproteobacteria	5.15486	50.7	chromosome:NC_011748.1/CU928145.2	-	1	5363	5004	12/16/08	2/22/17	Complete Genome	Institut Pasteur and Genoscope	SAMEA3138229	GCA_000026245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/245/GCA_000026245.1_ASM2624v1	-	55989
Streptococcus iniae 9117	386894	PRJNA16831	16831	Terrabacteria group	Firmicutes	2.07836	36.8	-	AMOO01	1	2025	1889	9/18/12	4/10/17	Scaffold	Baylor College of Medicine	SAMN00000311	GCA_000300915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/915/GCA_000300915.1_ASM30091v1	24625962	9117
Prochlorococcus marinus str. MIT 9313	74547	PRJNA220	220	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.41087	50.7	chromosome:NC_005071.1/BX548175.1	-	1	2464	2369	8/14/03	3/29/17	Complete Genome	DOE Joint Genome Institute	SAMEA3138210	GCA_000011485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/485/GCA_000011485.1_ASM1148v1	12917642	MIT9313
Clostridium novyi A str. GD211209	1443118	PRJNA233473	233473	Terrabacteria group	Firmicutes	2.45931	28.5764	plasmid p1CnGD211209:NZ_CM003331.1/CM003331.1	JENN01	104	2364	2174	6/20/14	4/3/17	Contig	National Veterinary Institute (SVA)	SAMN02593759	GCA_000724405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/405/GCA_000724405.2_GD211209_1.0	25254374	GD211209
Sinorhizobium medicae DI28	1041148	PRJNA162987	162987	Proteobacteria	Alphaproteobacteria	6.55362	61.1	-	ATTL01	104	6519	6032	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441594	GCA_000419665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/665/GCA_000419665.1_ASM41966v1	-	DI28
Nitrosomonas europaea ATCC 19718	228410	PRJNA52	52	Proteobacteria	Betaproteobacteria	2.81209	50.7	chromosome:NC_004757.1/AL954747.1	-	1	2694	2544	4/24/03	5/28/17	Complete Genome	DOE Joint Genome Institute	SAMEA3138193	GCA_000009145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/145/GCA_000009145.1_ASM914v1	12700255	ATCC 19718
Spongiibacter sp. IMCC21906	1620392	PRJNA276161	276161	Proteobacteria	Gammaproteobacteria	3.48167	50.6971	chromosome:NZ_CP011477.1/CP011477.1; plasmid unnamed:NZ_CP011478.1/CP011478.1	-	2	3235	3145	5/20/15	4/10/17	Complete Genome	Inha University	SAMN03372475	GCA_001010805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/805/GCA_001010805.1_ASM101080v1	-	IMCC21906
Escherichia coli	562	PRJNA316786	316786	Proteobacteria	Gammaproteobacteria	5.72741	50.6901	chromosome:NZ_CP018991.1/CP018991.1; plasmid pECAZ146_1:NZ_CP018990.1/CP018990.1; plasmid pECAZ146_3:NZ_CP018988.1/CP018988.1; plasmid pECAZ146_4:NZ_CP018987.1/CP018987.1; plasmid pECAZ146_5:NZ_CP018986.1/CP018986.1; plasmid pECAZ146_6:NZ_CP018985.1/CP018985.1; plasmid pECAZ146_7:NZ_CP018984.1/CP018984.1; plasmid pECAZ146_KPC:NZ_CP018989.1/CP018989.1	-	8	6101	5676	3/3/17	3/6/17	Complete Genome	University of Oxford	SAMN05511152	GCA_002012085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/085/GCA_002012085.1_ASM201208v1	-	Ecol_AZ146
Lachnoclostridium phytofermentans	66219	PRJNA239497	239497	Terrabacteria group	Firmicutes	4.61483	35.7	-	JPOF01	9	3969	3799	7/24/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02744595	GCA_000733755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/755/GCA_000733755.1_ASM73375v1	-	KNHs2131
Legionella longbeachae D-4968	638315	PRJNA36681	36681	Proteobacteria	Gammaproteobacteria	4.08621	37.1	-	ACZG01	13	3593	3409	11/30/09	4/7/17	Contig	Centers for Disease Control and Prevention	SAMN02951933	GCA_000176095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/095/GCA_000176095.1_ASM17609v1	20008069	D-4968
Yersinia intermedia	631	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	5.12761	47.6	-	CPZJ01	55	4771	4516	3/23/15	4/3/17	Scaffold	SC	SAMEA859852	GCA_001088505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/505/GCA_001088505.1_4840_7_1	-	BR165/97
Yersinia mollaretii	33060	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.66345	49.4	-	CQDS01	62	4303	4130	3/23/15	4/3/17	Scaffold	SC	SAMEA859879	GCA_001149645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/645/GCA_001149645.1_4821_8_10	-	IP25089
Flavobacterium johnsoniae	986	PRJEB18212	355496	FCB group	Bacteroidetes/Chlorobi group	5.45751	33.9	-	FQWH01	35	4819	4680	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444388	GCA_900129605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/605/GCA_900129605.1_IMG-taxon_2695420961_annotated_assembly	-	DSM 6792
Leuconostoc citreum LBAE E16	1127129	PRJEA78997	78997	Terrabacteria group	Firmicutes	1.8016	38.9	-	CAGG01	45	1806	1718	12/21/11	3/30/17	Contig	LISBP	SAMEA2272523	GCA_000239935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/935/GCA_000239935.2_ASM23993v2	-	LBAE E16
Leuconostoc gelidum subsp. gasicomitatum	115778	PRJEB12230	324799	Terrabacteria group	Firmicutes	2.08518	36.5	-	FBTD01	22	2122	1997	6/8/16	7/29/17	Scaffold	UNIVERSITY OF HELSINKI	SAMEA3718678	GCA_900016175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/175/GCA_900016175.1_ASM90001617v1	-	PB1e
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	5.13721	50.6887	chromosome:NZ_CP010172.1/CP010172.1; plasmid A:NZ_CP010173.1/CP010173.1; plasmid B:NZ_CP010174.1/CP010174.1; plasmid C:NZ_CP010175.1/CP010175.1	-	4	5318	4918	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252435	GCA_001900835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/835/GCA_001900835.1_ASM190083v1	-	H8
Nitrosomonas eutropha	916	PRJEB16773	350932	Proteobacteria	Betaproteobacteria	2.51995	48	-	FNYF01	72	2412	2217	10/29/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216318	GCA_900108975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/975/GCA_900108975.1_IMG-taxon_2671180128_annotated_assembly	-	Nm56
Escherichia coli	562	PRJNA316786	316786	Proteobacteria	Gammaproteobacteria	5.35187	50.6865	chromosome:NZ_CP019015.1/CP019015.1; plasmid pECAZ162_2:NZ_CP019013.1/CP019013.1; plasmid pECAZ162_KPC:NZ_CP019014.1/CP019014.1	-	3	5599	5254	3/3/17	3/6/17	Complete Genome	University of Oxford	SAMN05511185	GCA_002012165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/165/GCA_002012165.1_ASM201216v1	-	Ecol_AZ162
Vibrio sp. MED222	314290	PRJNA13616	13616	Proteobacteria	Gammaproteobacteria	4.98403	44	-	AAND01	21	4384	4144	1/27/06	5/19/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436138	GCA_000153005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/005/GCA_000153005.1_ASM15300v1	-	MED222
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	5.37241	50.6861	chromosome:NZ_CP010240.1/CP010240.1; plasmid A:NZ_CP010241.1/CP010241.1	-	2	5698	5321	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252414	GCA_001901425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/425/GCA_001901425.1_ASM190142v1	-	C7
Streptococcus sanguinis SK405	888817	PRJNA53175	53175	Terrabacteria group	Firmicutes	2.29829	43.3	-	AEWZ01	9	2295	2207	3/1/11	3/30/17	Scaffold	Baylor College of Medicine	SAMN00253311	GCA_000191105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/105/GCA_000191105.1_ASM19110v1	-	SK405
Nitrosospira multiformis	1231	PRJEB16916	351049	Proteobacteria	Betaproteobacteria	3.5724	53.1	-	FOCT01	49	3371	3178	10/29/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216404	GCA_900110185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/185/GCA_900110185.1_IMG-taxon_2671180076_annotated_assembly	-	Nl18
Rickettsia felis str. LSU	1359195	PRJNA258182	258182	Proteobacteria	Alphaproteobacteria	1.54697	32.4	-	JSEM01	22	1658	887	12/18/14	12/20/14	Contig	Western Carolina University	SAMN02989760	GCA_000804525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/525/GCA_000804525.1_ASM80452v1	25477419	LSU
Rhodococcus jostii	132919	PRJNA289318	289318	Terrabacteria group	Actinobacteria	8.50508	67.2	-	LGSV01	507	8203	7355	9/16/15	4/11/17	Scaffold	University of East Anglia	SAMN03852607	GCA_001292845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/845/GCA_001292845.1_ASM129284v1	-	8
Escherichia coli K-12	83333	PRJNA309536	309536	Proteobacteria	Gammaproteobacteria	4.7798	50.6854	chromosome:NZ_CP014270.1/CP014270.1; plasmid F128-(DHB4):NZ_CP014271.1/CP014271.1	-	2	4957	4597	2/11/16	2/25/17	Complete Genome	New England Biolabs	SAMN04435497	GCA_001559655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/655/GCA_001559655.1_ASM155965v1	-	DHB4
Bacillus weihenstephanensis FSL H7-687	1227358	PRJNA173844	173844	Terrabacteria group	Firmicutes	5.67354	35.2	-	ASPY01	112	5863	5523	1/13/14	4/2/17	Contig	Cornell University	SAMN02597353	GCA_000517985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/985/GCA_000517985.1_ASM51798v1	24422886	FSL H7-687
Leeuwenhoekiella blandensis	360293	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.88852	39.8	-	DEMA01	32	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06453895	GCA_002354685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/685/GCA_002354685.1_ASM235468v1	28894102	-
Photobacterium angustum	661	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.76912	39.6	-	JZSU01	70	4272	4029	3/10/15	4/3/17	Contig	FDA/CFSAN	SAMN03295475	GCA_000950025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/025/GCA_000950025.1_CFSAN029427_01.0	25931609	GCSL-A10-1
Parabacteroides distasonis str. 3776 Po2 i	1339341	PRJNA206125	206125	FCB group	Bacteroidetes/Chlorobi group	5.28823	44.9	-	JNHL01	172	4607	4287	6/9/14	6/12/17	Contig	IGS	SAMN02370936	GCA_000699745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/745/GCA_000699745.1_ASM69974v1	-	3776 Po2 i
Escherichia coli PCN033	1001989	PRJNA64999	64999	Proteobacteria	Gammaproteobacteria	5.15687	50.6848	chromosome:NZ_CP006632.1/CP006632.1; plasmid PCN033p1:NZ_CP006633.1/CP006633.1; plasmid PCN033p2:NZ_CP006634.1/CP006634.1; plasmid PCN033p3:NZ_CP006635.1/CP006635.1	-	4	5310	4971	6/8/15	3/22/17	Complete Genome	Huazhong Agricultural University	SAMN02469619	GCA_000219515.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/515/GCA_000219515.3_ASM21951v3	26391348	PCN033
Escherichia coli	562	PRJNA316786	316786	Proteobacteria	Gammaproteobacteria	5.10193	50.6811	chromosome:NZ_CP019008.1/CP019008.1; plasmid pECAZ159_1:NZ_CP019007.1/CP019007.1; plasmid pECAZ159_2:NZ_CP019006.1/CP019006.1	-	3	5251	4912	3/3/17	3/6/17	Complete Genome	University of Oxford	SAMN05511159	GCA_002012145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/145/GCA_002012145.1_ASM201214v1	-	Ecol_AZ159
Edwardsiella ictaluri	67780	PRJNA285663	285663	Proteobacteria	Gammaproteobacteria	3.70126	57.4	-	LDWX01	127	3434	2668	7/2/15	12/24/15	Scaffold	Louisiana state university	SAMN03755268	GCA_001078645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/645/GCA_001078645.1_ASM107864v1	26679579	LADL11-100
Neisseria lactamica ATCC 23970	546265	PRJNA30475	30475	Proteobacteria	Betaproteobacteria	2.17199	52.2	-	ACEQ02	101	2322	1947	2/3/09	3/30/17	Contig	Washington University Genome Sequencing Center	SAMN00008840	GCA_000173995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/995/GCA_000173995.1_ASM17399v1	-	ATCC 23970
Arthrospira platensis str. Paraca	634502	PRJNA34793	34793	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.50189	44.3	-	ACSK03	268	6582	5707	7/17/09	4/9/17	Contig	University of Applied Sciences of Western Switzerland	SAMN02344446	GCA_000175415.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/415/GCA_000175415.3_ASM17541v3	25103760	Paraca
Listeria seeligeri	1640	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.89781	37.3	-	MJUD01	19	2903	2817	1/9/17	3/2/17	Scaffold	University of California at Davis	SAMN03358298	GCA_001939275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/275/GCA_001939275.1_ASM193927v1	-	BCW_4759
Escherichia coli O103:H2 str. 12009	585395	PRJDA32511	32511	Proteobacteria	Gammaproteobacteria	5.52486	50.6781	chromosome:NC_013353.1/AP010958.1; plasmid pO103:NC_013354.1/AP010959.1	-	2	5911	5441	9/10/09	2/22/17	Complete Genome	"University of Tokyo, Graduate School of Frontier Sciences"	SAMD00060956	GCA_000010745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/745/GCA_000010745.1_ASM1074v1	19815525	12009
Xenorhabdus nematophila	628	PRJNA260874	260874	Proteobacteria	Gammaproteobacteria	4.38638	43.7	-	JRJV01	284	4204	2805	11/20/14	4/9/17	Contig	Kyungpook National University	SAMN03070056	GCA_000785665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/665/GCA_000785665.1_ASM78566v1	25676754	C2-3
Escherichia coli	562	PRJNA314794	314794	Proteobacteria	Gammaproteobacteria	5.52265	50.6762	chromosome:CP014752.1; plasmid unnamed:CP014753.1	-	2	5690	4987	7/6/17	7/6/17	Complete Genome	Pennsylvania State University	SAMN04543670	GCA_002215155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/155/GCA_002215155.1_ASM221515v1	-	PSUO103
Xenorhabdus bovienii str. kraussei Quebec	1398203	PRJEB4324	255626	Proteobacteria	Gammaproteobacteria	4.1791	44.2	-	CBSY01	274	3756	3430	7/17/14	4/2/17	Scaffold	UWM	SAMEA3139089	GCA_000736555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/555/GCA_000736555.1_XBKQ_3535_PRJEB4324	-	kraussei Quebec
Agrobacterium vitis	373	PRJNA328208	328208	Proteobacteria	Alphaproteobacteria	6.14271	57.6	-	MAVS01	75	5560	5347	10/12/16	4/5/17	Contig	Monash University Malaysia	SAMN05366381	GCA_001758305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/305/GCA_001758305.1_ASM175830v1	-	AB3
Bacteroides vulgatus dnLKV7	1235786	PRJNA175975	175975	FCB group	Bacteroidetes/Chlorobi group	5.12873	42.4	-	ASSN01	17	4370	4105	5/29/13	4/1/17	Scaffold	Broad Institute	SAMN01730984	GCA_000403235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/235/GCA_000403235.2_Bact_vulg_dnLKV7_V1	-	dnLKV7
Wolbachia endosymbiont of Drosophila simulans	77038	PRJNA13364	13364	Proteobacteria	Alphaproteobacteria	1.0631	35.4	-	AAGC01	629	761	760	2/3/05	12/5/13	Contig	TIGR	SAMN02435892	GCA_000167495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/495/GCA_000167495.1_ASM16749v1	15774024	-
Marinobacter hydrocarbonoclasticus	2743	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.11212	57.2	-	DCES01	72	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06457799	GCA_002312005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/005/GCA_002312005.1_ASM231200v1	28894102	-
Escherichia coli	562	PRJNA383767	383767	Proteobacteria	Gammaproteobacteria	5.07818	50.6762	chromosome:NZ_CP020933.1/CP020933.1; plasmid unnamed1:NZ_CP020934.1/CP020934.1; plasmid unnamed2:NZ_CP020935.1/CP020935.1; plasmid unnamed3:NZ_CP020936.1/CP020936.1	-	4	5270	4895	5/1/17	5/3/17	Complete Genome	Agricultural University of Hebei Province	SAMN06819205	GCA_002116715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/116/715/GCA_002116715.1_ASM211671v1	-	HB-Coli0
Bacillus clausii	79880	PRJNA280495	280495	Terrabacteria group	Firmicutes	4.19732	44.6	-	LATY01	61	4200	4068	4/28/15	4/10/17	Contig	CSIR-Institute of Microbial Technology	SAMN03463611	GCA_000981315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/315/GCA_000981315.1_ASM98131v1	27103711	UBBC-07
[Eubacterium] eligens	39485	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.74386	37.3	-	MNSM01	15	1584	1542	12/23/16	12/23/16	Scaffold	None	SAMN05717270	GCA_001916465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/465/GCA_001916465.1_ASM191646v1	27819664	-
Nocardia farcinica	37329	PRJNA322144	322144	Terrabacteria group	Actinobacteria	5.23001	68	-	LYCQ01	321	4775	4326	8/12/16	4/13/17	Contig	UFV	SAMN05017772	GCA_001704135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/135/GCA_001704135.1_ASM170413v1	-	TRH1
Thiobacillus denitrificans	36861	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	3.18934	67.5	-	DCWD01	7	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455572	GCA_002328085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/085/GCA_002328085.1_ASM232808v1	28894102	-
Citrobacter koseri	545	PRJNA272099	272099	Proteobacteria	Gammaproteobacteria	4.81195	53.8	-	LRPT01	55	4688	4489	2/2/16	4/4/17	Scaffold	The Genome Institute at Washington University	SAMN03842475	GCA_001546325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/325/GCA_001546325.1_ASM154632v1	-	PSS_7778B
Syntrophomonas wolfei	863	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.50459	44.3	-	DCDX01	188	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452062	GCA_002316655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/655/GCA_002316655.1_ASM231665v1	28894102	-
Escherichia coli O145:H28 str. RM12581	1248823	PRJNA178647	178647	Proteobacteria	Gammaproteobacteria	5.73729	50.6743	chromosome:NZ_CP007136.1/CP007136.1; plasmid pO145-12581:NZ_CP007138.1/CP007138.1; plasmid pRM12581:NZ_CP007137.1/CP007137.1	-	3	6104	5550	5/1/14	2/23/17	Complete Genome	USDA-ARS-WRRC-PSM	SAMN03081527	GCA_000671295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/295/GCA_000671295.1_ASM67129v1	24855308	RM12581
Streptomyces scabiei	1930	PRJNA282688	282688	Terrabacteria group	Actinobacteria	9.83934	71.5	-	LBNJ01	1091	8865	8036	5/8/15	3/11/17	Contig	USDA/ARS/NCAUR	SAMN03573919	GCA_001005405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/405/GCA_001005405.1_ASM100540v1	-	NRRL B-16523
Escherichia coli O145:H28 str. RM13514	1248902	PRJNA178648	178648	Proteobacteria	Gammaproteobacteria	5.73729	50.6743	chromosome:NZ_CP006027.1/CP006027.1; plasmid pO145-13514:NZ_CP006028.1/CP006028.1; plasmid pRM13514:NZ_CP006029.1/CP006029.1	-	3	6106	5554	1/14/14	2/23/17	Complete Genome	"USDA, ARS, WRRC, PSM"	SAMN02641383	GCA_000520035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/035/GCA_000520035.1_ASM52003v1	24410921	RM13514
Erwinia amylovora LA636	1407063	PRJEB4665	231575	Proteobacteria	Gammaproteobacteria	3.78987	53.5629	chromosome I:NZ_CBVT010000001.1/CBVT010000001.1; chromosome II:NZ_CBVT010000002.1/CBVT010000002.1; chromosome III:NZ_CBVT010000003.1/CBVT010000003.1; chromosome IV:NZ_CBVT010000004.1/CBVT010000004.1; chromosome V:NZ_CBVT010000005.1/CBVT010000005.1; chromosome VI:NZ_CBVT010000006.1/CBVT010000006.1; chromosome VII:NZ_CBVT010000007.1/CBVT010000007.1; chromosome VIII:NZ_CBVT010000008.1/CBVT010000008.1; plasmid IX:NC_023071.1/HG793097.1	CBVT01	9	3561	3407	12/4/13	4/2/17	Chromosome	CeBiTec	SAMEA3138843	GCA_000513395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/395/GCA_000513395.1_EA_LA636	-	LA636
Shigella flexneri G1663	1435046	PRJNA231092	231092	Proteobacteria	Gammaproteobacteria	4.81731	50.669	chromosome:NZ_CP007037.1/CP007037.1; plasmid pG1663:NZ_CP007038.1/CP007038.1	-	2	5246	4374	6/8/15	8/8/17	Complete Genome	TEDA Institute of Biological and Biotechnology	SAMN02440121	GCA_001021855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/855/GCA_001021855.1_ASM102185v1	-	G1663
Escherichia coli	562	PRJNA287566	287566	Proteobacteria	Gammaproteobacteria	5.23057	50.6686	chromosome:NZ_CP012112.1/CP012112.1; plasmid pPSUO78_1:NZ_CP012113.1/CP012113.1; plasmid pPSUO78_2:NZ_CP012114.1/CP012114.1	-	3	5461	4686	7/6/17	8/4/17	Complete Genome	Pennsylvania State University	SAMN03783370	GCA_002215115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/115/GCA_002215115.1_ASM221511v1	-	PSUO78
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	5.20733	50.6672	chromosome:NZ_CP010134.1/CP010134.1; plasmid A:NZ_CP010135.1/CP010135.1; plasmid B:NZ_CP010136.1/CP010136.1	-	3	5449	5043	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252419	GCA_001900595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/595/GCA_001900595.1_ASM190059v1	-	D1
Shigella flexneri 2a str. 301	198214	PRJNA310	310	Proteobacteria	Gammaproteobacteria	4.82882	50.6659	chromosome:NC_004337.2/AE005674.2; plasmid pCP301:NC_004851.1/AF386526.1	-	2	4788	4313	10/16/02	8/24/16	Complete Genome	Microbial Genome Center of ChMPH	SAMN02603599	GCA_000006925.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/006/925/GCA_000006925.2_ASM692v2	12384590	301
Escherichia coli O26:H11 str. 11368	573235	PRJDA32509	32509	Proteobacteria	Gammaproteobacteria	5.85553	50.664	chromosome:NC_013361.1/AP010953.1; plasmid pO26_1:NC_013369.1/AP010954.1; plasmid pO26_2:NC_013362.1/AP010955.1; plasmid pO26_3:NC_013363.1/AP010956.1; plasmid pO26_4:NC_014543.1/AP010957.1	-	5	6377	5906	9/10/09	2/22/17	Complete Genome	"University of Tokyo, Graduate School of Frontier Sciences"	SAMD00060955	GCA_000091005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/091/005/GCA_000091005.1_ASM9100v1	19815525	11368
Escherichia coli S88	585035	PRJNA33375	33375	Proteobacteria	Gammaproteobacteria	5.16612	50.6637	chromosome:NC_011742.1/CU928161.2; plasmid pECOS88:NC_011747.1/CU928146.1	-	2	5427	5040	12/16/08	8/30/17	Complete Genome	Genoscope	SAMEA3138231	GCA_000026285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/285/GCA_000026285.2_ASM2628v2	-	S88
Crocosphaera watsonii WH 0401	555881	PRJEB1316	219028	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.54972	37.7	-	CAQM01	918	4538	3640	9/10/13	4/10/17	Contig	UCSC	SAMEA3146324	GCA_001039615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/615/GCA_001039615.1_WH0401_v1	-	WH 0401
Brucella ovis IntaBari-2010-47-268	1293914	PRJNA189526	189526	Proteobacteria	Alphaproteobacteria	3.29142	57.2	-	AQIH01	23	3412	3032	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN01921147	GCA_000371345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/345/GCA_000371345.1_Bruc_ovis_IntaBari-2010-47-268_V1	-	IntaBari-2010-47-268
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	5.23617	50.6627	chromosome:NZ_CP010140.1/CP010140.1; plasmid A:NZ_CP010141.1/CP010141.1; plasmid B:NZ_CP010142.1/CP010142.1	-	3	5484	5119	12/12/16	3/2/17	Complete Genome	Nanjing Agricultural University	SAMN03252421	GCA_001900635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/635/GCA_001900635.1_ASM190063v1	-	D3
Photorhabdus luminescens NBAII HiPL101	1429884	PRJNA229914	229914	Proteobacteria	Gammaproteobacteria	5.36665	42.5	-	JTHJ02	720	4688	4258	12/8/14	7/3/17	Contig	Washington State University	SAMN03198696	GCA_000798635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/635/GCA_000798635.2_ASM79863v2	26697329	NBAII HiPL101
Staphylococcus haemolyticus	1283	PRJNA239283	239283	Terrabacteria group	Firmicutes	2.52792	32.7	-	JFOJ01	81	2501	2344	4/11/14	3/24/17	Contig	Monash University Malaysia	SAMN02676621	GCA_000627275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/275/GCA_000627275.1_Willow_Endophyte_RIT283	24812212	RIT283
Shigella flexneri 2002017	591020	PRJNA33639	33639	Proteobacteria	Gammaproteobacteria	4.89449	50.6619	chromosome:NC_017328.1/CP001383.1; plasmid pSFxv_1:NC_017319.1/CP001384.1; plasmid pSFxv_2:NC_017320.1/CP001385.1; plasmid pSFxv_3:NC_017329.1/CP001386.1; plasmid pSFxv_4:NC_017321.1/CP001387.1; plasmid pSFxv_5:NC_017330.1/CP001388.1	-	6	5366	4435	12/24/09	8/4/17	Complete Genome	Chinese Center for Disease Control and Prevention	SAMN02603122	GCA_000022245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/245/GCA_000022245.1_ASM2224v1	19955273	2002017
Escherichia coli O104:H21 str. CFSAN002236	1335303	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.04592	50.6616	chromosome:CP023541.1; plasmid pO104_H21:CP023542.1	-	2	5211	4866	9/21/17	10/2/17	Complete Genome	FDA/CFSAN	SAMN02147037	GCA_000464955.2	-	-	-	CFSAN002236
Myxococcus xanthus	34	PRJEB16561	349831	Proteobacteria	delta/epsilon subdivisions	9.26397	68.9	-	FNOH01	91	7526	7317	10/22/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444383	GCA_900106535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/535/GCA_900106535.1_IMG-taxon_2693429903_annotated_assembly	-	DSM 16526
Escherichia coli	562	PRJNA253936	253936	Proteobacteria	Gammaproteobacteria	5.04591	50.6616	chromosome:NZ_CP009106.2/CP009106.2; plasmid pO104_H21:NZ_CP009107.1/CP009107.1	-	2	5188	4865	12/15/14	2/23/17	Complete Genome	USDA-ARS	SAMN03262652	GCA_000801185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/185/GCA_000801185.2_ASM80118v2	25887577	94-3024
Brevibacterium linens	1703	PRJNA387187	387187	Terrabacteria group	Actinobacteria	4.31061	62.8	-	NRGX01	1	3923	3761	9/21/17	9/23/17	Contig	"Dutton Lab, UCSD"	SAMN07141170	GCA_002332225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/225/GCA_002332225.1_ASM233222v1	28644126	JB5
Chromobacterium violaceum	536	PRJNA277398	277398	Proteobacteria	Betaproteobacteria	4.75571	65	-	LDUM01	94	4425	4278	6/30/15	4/3/17	Contig	University of Malaya	SAMN03390111	GCA_001043595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/595/GCA_001043595.1_ASM104359v1	-	LK6
Escherichia coli	562	PRJNA316786	316786	Proteobacteria	Gammaproteobacteria	4.9681	50.6611	chromosome:NZ_CP018965.1/CP018965.1; plasmid pEC517_1:NZ_CP018964.1/CP018964.1; plasmid pEC517_KPC:NZ_CP018963.1/CP018963.1	-	3	5165	4753	3/3/17	3/6/17	Complete Genome	University of Oxford	SAMN05511179	GCA_002012005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/005/GCA_002012005.1_ASM201200v1	-	Ecol_517
Cyanothece sp. PCC 7425	395961	PRJNA28337	28337	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.78611	50.6603	chromosome:NC_011884.1/CP001344.1; plasmid pP742501:NC_011880.1/CP001345.1; plasmid pP742502:NC_011885.1/CP001346.1; plasmid pP742503:NC_011882.1/CP001347.1	-	4	5411	5202	1/9/09	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000655	GCA_000022045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/045/GCA_000022045.1_ASM2204v1	-	PCC 7425
Escherichia coli	562	PRJNA277394	277394	Proteobacteria	Gammaproteobacteria	5.09264	50.6576	chromosome:NZ_CP011018.1/CP011018.1; plasmid unnamed:NZ_CP011019.1/CP011019.1	-	2	5280	4962	4/13/15	2/23/17	Complete Genome	National University of Singapore and Genome Institute of Singapore	SAMN03390066	GCA_000971615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/615/GCA_000971615.1_ASM97161v1	26021932	CI5
Escherichia coli	562	PRJNA398221	398221	Proteobacteria	Gammaproteobacteria	5.208	50.6549	chromosome:NZ_CP023349.1/CP023349.1; plasmid unnamed1:NZ_CP023350.1/CP023350.1; plasmid unnamed2:NZ_CP023351.1/CP023351.1; plasmid unnamed3:NZ_CP023352.1/CP023352.1	-	4	5477	5087	9/14/17	9/16/17	Complete Genome	Karolinska Institutet	SAMN07503733	GCA_002302335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/335/GCA_002302335.1_ASM230233v1	-	ETEC-2264
Rhodopirellula baltica SWK14	993516	PRJNA63491	63491	PVC group	Planctomycetes	7.48893	55.4	-	AMWG01	189	6240	5971	1/2/13	5/19/17	Contig	MIMAS	SAMN02261084	GCA_000330745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/745/GCA_000330745.1_ASM33074v1	23273849	SWK14
Shigella sonnei	624	PRJNA369464	369464	Proteobacteria	Gammaproteobacteria	5.22405	50.6512	chromosome:NZ_CP019689.1/CP019689.1; plasmid p75-02_2:NZ_CP019690.1/CP019690.1; plasmid p75-02_3:NZ_CP019691.1/CP019691.1; plasmid p75-02_4:NZ_CP019692.1/CP019692.1; plasmid p75-02_5:NZ_CP019693.1/CP019693.1; plasmid p75-02_6:NZ_CP019694.1/CP019694.1; plasmid p75-02_7:NZ_CP019695.1/CP019695.1; plasmid pInv_75_02_1:NZ_CP019696.1/CP019696.1	-	8	5806	4772	5/19/17	8/4/17	Complete Genome	Seqomics Ltd.	SAMN06286561	GCA_002150905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/905/GCA_002150905.1_ASM215090v1	-	75/02
Escherichia coli O104:H4 str. 2009EL-2071	1133853	PRJNA81099	81099	Proteobacteria	Gammaproteobacteria	5.38971	50.651	chromosome:NC_018661.1/CP003301.1; plasmid pAA-09EL71:NC_018662.1/CP003302.1; plasmid pG-09EL71:NC_018663.1/CP003303.1	-	3	5715	5283	9/27/12	2/22/17	Complete Genome	Los Alamos National Laboratory	SAMN01831190	GCA_000299475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/475/GCA_000299475.1_ASM29947v1	23133618	2009EL-2071
Escherichia coli	562	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.38737	50.6509	chromosome:CP023531.1; plasmid unnamed:CP023530.1	-	2	5703	5236	9/28/17	9/28/17	Complete Genome	US Food and Drug Administration 	SAMN07312445	GCA_002393465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/465/GCA_002393465.1_ASM239346v1	-	FDAARGOS_401
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	5.14634	50.6503	chromosome:NZ_CP010183.1/CP010183.1; plasmid A:NZ_CP010184.1/CP010184.1; plasmid B:NZ_CP010185.1/CP010185.1	-	3	5331	4975	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252440	GCA_001901045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/045/GCA_001901045.1_ASM190104v1	-	M3
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	5.14807	50.6496	chromosome:NZ_CP010180.1/CP010180.1; plasmid A:NZ_CP010181.1/CP010181.1; plasmid B:NZ_CP010182.1/CP010182.1	-	3	5335	4977	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252439	GCA_001901025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/025/GCA_001901025.1_ASM190102v1	-	M1
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.15281	50.6434	chromosome:NZ_CP012631.1/CP012631.1; plasmid pSF-173-1:NZ_CP012632.1/CP012632.1	-	2	5334	5011	9/9/15	2/24/17	Complete Genome	Santa Clara University	SAMN04026227	GCA_001280405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/405/GCA_001280405.1_ASM128040v1	26543109	SF-173
Clostridium tetani	1513	PRJNA260198	260198	Terrabacteria group	Firmicutes	2.89053	28.4	-	JRGI01	40	2818	2708	10/2/14	4/2/17	Scaffold	"FDA, Center for Biologics Evaluation and Research"	SAMN03018576	GCA_000762325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/325/GCA_000762325.1_ASM76232v1	-	ATCC 453
Rhodobacter capsulatus	1061	PRJEB15810	347769	Proteobacteria	Alphaproteobacteria	3.86476	66.3	-	FNAY01	68	3742	3583	10/20/16	4/5/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04244550	GCA_900102155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/155/GCA_900102155.1_IMG-taxon_2597490355_annotated_assembly	-	DSM 938
Bartonella quintana JK 73	1402976	PRJNA221534	221534	Proteobacteria	Alphaproteobacteria	1.59492	38.9	-	AZZX01	3	1400	1214	1/8/14	4/10/17	Scaffold	Broad Institute	SAMN02364135	GCA_000516795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/795/GCA_000516795.1_Bart_quin_JK_73_V1	-	JK 73
Streptococcus uberis C9359	1450187	PRJNA234018	234018	Terrabacteria group	Firmicutes	1.83771	36.5	-	JATJ01	11	1859	1774	4/22/15	4/3/17	Contig	University of Nottingham	SAMN02570395	GCA_000975335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/975/335/GCA_000975335.1_ASM97533v1	25898893	C9359
Bacteroides thetaiotaomicron	818	PRJNA257720	257720	FCB group	Bacteroidetes/Chlorobi group	6.08978	43	-	LTDD01	108	4824	4581	3/2/16	4/5/17	Scaffold	The Genome Institute at Washington University	SAMN04324905	GCA_001578565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/565/GCA_001578565.1_ASM157856v1	-	KLE1254
Escherichia coli	562	PRJNA301212	301212	Proteobacteria	Gammaproteobacteria	5.26728	50.6413	chromosome:CP013185.1; plasmid FORC_029p:CP013186.1	-	2	5117	4999	11/28/16	11/28/16	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN04243989	GCA_001886895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/895/GCA_001886895.1_ASM188689v1	-	FORC_029
Pectobacterium atrosepticum CFBP 6276	1289594	PRJNA188399	188399	Proteobacteria	Gammaproteobacteria	4.86943	51.0935	plasmid pL1Pa6276:NZ_CM001850.1/CM001850.1; plasmid pL2Pa6276:NZ_CM001851.1/CM001851.1	ASAB01	4	4386	4170	5/7/13	4/1/17	Scaffold	Institut des Sciences du vegetal	SAMN02469608	GCA_000389755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/755/GCA_000389755.1_Pa6276v1.0	23788545	CFBP 6276
Escherichia coli	562	PRJNA398221	398221	Proteobacteria	Gammaproteobacteria	5.31946	50.6354	chromosome:NZ_CP023346.1/CP023346.1; plasmid unnamed1:NZ_CP023347.1/CP023347.1; plasmid unnamed2:NZ_CP023348.1/CP023348.1	-	3	5637	5229	9/14/17	9/16/17	Complete Genome	Karolinska Institutet	SAMN07503734	GCA_002302315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/315/GCA_002302315.1_ASM230231v1	-	ETEC-2265
Escherichia coli	562	PRJNA384104	384104	Proteobacteria	Gammaproteobacteria	5.25643	50.6352	chromosome:NZ_CP021175.1/CP021175.1; plasmid p5CRE51-MCR-1:NZ_CP021176.1/CP021176.1; plasmid p5CRE51-NDM-9:NZ_CP021177.1/CP021177.1	-	3	5511	5100	5/16/17	5/24/17	Complete Genome	"Centers for Disease Control, Tawian"	SAMN06828737	GCA_002142695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/695/GCA_002142695.1_ASM214269v1	-	5CRE51
Colwellia psychrerythraea	28229	PRJNA320927	320927	Proteobacteria	Gammaproteobacteria	4.61423	38.1	-	MAAF01	121	3937	3830	5/31/17	5/31/17	Scaffold	Lawrence Berkeley National Lab	SAMN05179553	GCA_002163005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/005/GCA_002163005.1_ASM216300v1	28652349	-
Escherichia coli	562	PRJEA76335	76335	Proteobacteria	Gammaproteobacteria	5.44334	50.6352	chromosome I:NZ_HF572917.1/HF572917.2; plasmid II:NC_022742.1/HE610900.2; plasmid III:NC_022743.1/HE610901.2; plasmid IV:NC_022741.1/HE610902.1	-	4	5766	5322	1/7/15	9/20/17	Complete Genome	Justus-Liebig-University Giessen	SAMEA3865278	GCA_000967155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/155/GCA_000967155.1_HUSEC2011CHR1	-	HUSEC2011
Escherichia coli O104:H4 str. 2011C-3493	1133852	PRJNA81095	81095	Proteobacteria	Gammaproteobacteria	5.43741	50.6346	chromosome:NC_018658.1/CP003289.1; plasmid pAA-EA11:NC_018666.1/CP003291.1; plasmid pESBL-EA11:NC_018659.1/CP003290.1; plasmid pG-EA11:NC_018660.1/CP003292.1	-	4	5258	5138	9/27/12	3/22/17	Complete Genome	Los Alamos National Laboratory	SAMN01831188	GCA_000299455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/455/GCA_000299455.1_ASM29945v1	-	2011C-3493
Cupriavidus metallidurans	119219	PRJNA217716	217716	Proteobacteria	Betaproteobacteria	7.29187	63.3	-	JFZE01	109	6964	6750	6/16/14	4/2/17	Contig	Belgian Nuclear Research Center (SCK-CEN)	SAMN02644838	GCA_000709045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/045/GCA_000709045.1_assembly_v1_of_C._metallidurans_NA4	25059868	NA4
Vibrio furnissii NCTC 11218	903510	PRJNA53247	53247	Proteobacteria	Gammaproteobacteria	4.91641	50.634	chromosome 1:NC_016602.1/CP002377.1; chromosome 2:NC_016628.1/CP002378.1	-	2	4649	4412	12/17/10	5/19/17	Complete Genome	The University of Exeter	SAMN02603955	GCA_000184325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/184/325/GCA_000184325.1_ASM18432v1	21217006	NCTC 11218
Escherichia coli	562	PRJNA353939	353939	Proteobacteria	Gammaproteobacteria	5.15861	50.6323	chromosome:NZ_CP018206.1/CP018206.1; plasmid pMRSN346647_113.1:NZ_CP018207.1/CP018207.1; plasmid pMRSN346647_4.1:NZ_CP018208.1/CP018208.1	-	3	5269	4918	12/7/16	2/26/17	Complete Genome	Walter Reed Army Institute of Research	SAMN06067968	GCA_001890365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/365/GCA_001890365.1_ASM189036v1	-	MRSN346647
Streptomyces avermitilis	33903	PRJNA299228	299228	Terrabacteria group	Actinobacteria	8.95023	70.7	-	LMWT01	75	7900	7404	1/13/16	3/12/17	Scaffold	Bielefeld University	SAMN04193349	GCA_001514135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/135/GCA_001514135.1_ASM151413v1	-	DSM 46492
Escherichia coli	562	PRJNA402083	402083	Proteobacteria	Gammaproteobacteria	4.95157	50.6316	chromosome:NZ_CP023383.1/CP023383.1; plasmid p147:NZ_CP023384.1/CP023384.1; plasmid p87:NZ_CP023385.1/CP023385.1	-	3	5178	4747	9/18/17	9/20/17	Complete Genome	The Roslin Institute	SAMN07618122	GCA_002310715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/715/GCA_002310715.1_ASM231071v1	-	1223
Archaeoglobus fulgidus	2234	PRJNA278302	278302	Euryarchaeota	Archaeoglobi	2.03757	48.8	-	LGEQ01	99	2413	2413	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445115	GCA_001508745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/745/GCA_001508745.1_ASM150874v1	26787827	-
Escherichia coli	562	PRJNA241122	241122	Proteobacteria	Gammaproteobacteria	5.45618	50.6313	chromosome:NZ_CP013662.1/CP013662.1; plasmid pCFSAN004179G:NZ_CP012501.1/CP012501.1	-	2	5777	5301	7/1/16	2/25/17	Complete Genome	FDA	SAMN02688213	GCA_001677515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/515/GCA_001677515.1_ASM167751v1	-	08-00022
Thermobifida fusca NBRC 14071 = JCM 3263	1223522	PRJDB963	243798	Terrabacteria group	Actinobacteria	3.35158	66.9	-	BBGT01	1163	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016950	GCA_001313945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/945/GCA_001313945.1_ASM131394v1	-	JCM 3263
Listeria innocua	1642	PRJNA276829	276829	Terrabacteria group	Firmicutes	2.91116	37.4	-	JZCS01	21	2987	2861	3/23/15	2/27/17	Scaffold	University of Veterinary Medicine Vienna	SAMN03381197	GCA_000960585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/585/GCA_000960585.1_ASM96058v1	-	9KSM
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	5.09612	50.6302	chromosome:NZ_CP010125.1/CP010125.1; plasmid A:NZ_CP010126.1/CP010126.1; plasmid B:NZ_CP010127.1/CP010127.1; plasmid C:NZ_CP010128.1/CP010128.1	-	4	5233	4883	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252415	GCA_001900555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/555/GCA_001900555.1_ASM190055v1	-	C8
Clostridium acetobutylicum	1488	PRJNA322794	322794	Terrabacteria group	Firmicutes	4.09873	30.7	-	LZYX01	20	4025	3888	2/23/17	2/25/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05170515	GCA_002006385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/385/GCA_002006385.1_ASM200638v1	-	NCCB 24020
Lactobacillus gasseri JV-V03	525326	PRJNA31487	31487	Terrabacteria group	Firmicutes	2.01186	34.6	-	ACGO02	8	1985	1857	2/19/09	3/30/17	Scaffold	Baylor College of Medecine	SAMN00001501	GCA_000143645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/143/645/GCA_000143645.1_ASM14364v1	-	JV-V03
Escherichia coli	562	PRJNA323827	323827	Proteobacteria	Gammaproteobacteria	5.18616	50.6301	chromosome:NZ_CP015995.1/CP015995.1; plasmid pS51_1:NZ_CP015996.1/CP015996.1; plasmid pS51_2:NZ_CP015997.1/CP015997.1	-	3	5480	5079	6/9/16	2/25/17	Complete Genome	University of Zurich	SAMN05190012	GCA_001660565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/565/GCA_001660565.1_ASM166056v1	-	S51
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	5.07285	50.6299	chromosome:NZ_CP010231.1/CP010231.1; plasmid A:NZ_CP010232.1/CP010232.1; plasmid B:NZ_CP010233.1/CP010233.1; plasmid C:NZ_CP010234.1/CP010234.1	-	4	5272	4833	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252453	GCA_001901365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/365/GCA_001901365.1_ASM190136v1	-	S30
Escherichia coli	562	PRJNA402083	402083	Proteobacteria	Gammaproteobacteria	5.09128	50.6288	chromosome:NZ_CP023377.1/CP023377.1; plasmid p123:NZ_CP023378.1/CP023378.1; plasmid p39:NZ_CP023379.1/CP023379.1; plasmid p43:NZ_CP023380.1/CP023380.1; plasmid p91:NZ_CP023381.1/CP023381.1; plasmid p95:NZ_CP023382.1/CP023382.1	-	6	5528	4927	9/18/17	9/20/17	Complete Genome	The Roslin Institute	SAMN07618123	GCA_002310675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/675/GCA_002310675.1_ASM231067v1	-	127
Deinococcus radiodurans ATCC 13939	1408434	PRJNA223003	223003	Terrabacteria group	Deinococcus-Thermus	3.24071	66.8	-	JHYL01	51	3282	3030	4/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743895	GCA_000687895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/895/GCA_000687895.1_ASM68789v1	-	ATCC 13939
Ruminococcus albus AD2013	1384065	PRJNA214529	214529	Terrabacteria group	Firmicutes	4.23499	44.1	-	JAGS01	6	3752	3537	1/14/14	4/2/17	Contig	DOE Joint Genome Institute	SAMN02584992	GCA_000526775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/775/GCA_000526775.1_ASM52677v1	-	AD2013
Acidithiobacillus ferrooxidans	920	PRJNA308169	308169	Proteobacteria	Acidithiobacillia	3.10916	58.6	-	LQRJ01	123	3179	2955	2/11/16	4/4/17	Contig	TU Bergaakademie Freiberg	SAMN04387837	GCA_001559335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/335/GCA_001559335.1_ASM155933v1	-	Hel18
Nitrosomonas europaea	915	PRJEB19552	376311	Proteobacteria	Betaproteobacteria	2.73621	50.7	-	FUWK01	85	2696	2479	3/4/17	3/10/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745113	GCA_900167395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/395/GCA_900167395.1_IMG-taxon_2582581324_annotated_assembly	-	ATCC 25978
Rickettsia conorii subsp. israelensis ISTT CDC1	1168286	PRJNA156943	156943	Proteobacteria	Alphaproteobacteria	1.25282	32.5	-	AJVP01	33	-	-	5/22/12	1/8/14	Contig	URMITE CNRS UMR 6236 IRD 198	SAMN02471336	GCA_000263815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/815/GCA_000263815.1_RcoIs1.0	22933760	ISTT CDC1
Escherichia coli	562	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	5.36507	50.6278	chromosome:NZ_CP020048.1/CP020048.1; plasmid unitig_1:NZ_CP020049.1/CP020049.1; plasmid unitig_2:NZ_CP020050.1/CP020050.1; plasmid unitig_3:NZ_CP020051.1/CP020051.1	-	4	5654	5240	3/21/17	3/23/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014959	GCA_002055635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/635/GCA_002055635.1_ASM205563v1	-	AR_0118
Escherichia coli	562	PRJNA275512	275512	Proteobacteria	Gammaproteobacteria	5.12349	50.622	chromosome:NZ_CP019213.1/CP019213.1; plasmid pI1_WCHEC1613:NZ_CP019215.1/CP019215.1; plasmid pMCR_WCHEC1613:NZ_CP019214.1/CP019214.1; plasmid pP_WCHEC1613:NZ_CP019216.1/CP019216.1	-	4	5353	4856	1/23/17	2/26/17	Complete Genome	"West China Hospital, Sichuan University"	SAMN06197014	GCA_001969285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/285/GCA_001969285.1_ASM196928v1	-	WCHEC1613
Bordetella parapertussis	519	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	4.80012	68.1	-	LRII01	1	4493	3810	1/22/16	1/22/16	Contig	US Food and Drug Administration 	SAMN03996248	GCA_001525545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/545/GCA_001525545.1_ASM152554v1	-	NCTC 5952
Azotobacter vinelandii NBRC 13581	1314750	PRJDB1080	196453	Proteobacteria	Gammaproteobacteria	5.16941	65.7	-	BCTD01	313	4894	4649	2/18/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046744	GCA_001571105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/105/GCA_001571105.1_ASM157110v1	-	NBRC 13581
Bacteroides stercoris	46506	PRJNA283624	283624	FCB group	Bacteroidetes/Chlorobi group	3.85868	45.6	-	LRGC01	117	3256	3058	1/25/16	4/11/17	Scaffold	Brigham & Women's Hospital	SAMN03653591	GCA_001535605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/605/GCA_001535605.1_ASM153560v1	26768901	CL09T03C01
Coprococcus eutactus	33043	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.14959	43.9	-	CYYE01	24	2850	2740	10/1/15	4/11/17	Contig	SC	SAMEA3545296	GCA_001405115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/115/GCA_001405115.1_13414_6_72	-	2789STDY5608888
Mesorhizobium loti NZP2037	935546	PRJNA81803	81803	Proteobacteria	Alphaproteobacteria	7.46279	62.8	-	AQZP01	1	7349	6997	4/22/13	4/1/17	Scaffold	JGI	SAMN02261298	GCA_000384055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/055/GCA_000384055.1_ASM38405v1	-	NZP2037
Escherichia coli	562	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	5.32127	50.6211	chromosome:NZ_CP021722.1/CP021722.1; plasmid tig00000792:NZ_CP021719.1/CP021719.1; plasmid tig00000793:NZ_CP021720.1/CP021720.1; plasmid tig00000856:NZ_CP021721.1/CP021721.1	-	4	5577	5164	6/8/17	6/10/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014969	GCA_002180275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/275/GCA_002180275.1_ASM218027v1	-	AR_0128
Escherichia coli	562	PRJNA324008	324008	Proteobacteria	Gammaproteobacteria	5.07482	50.6194	chromosome:NZ_CP016007.1/CP016007.1; plasmid pNGF1_pCROD2_like:NZ_CP016008.1/CP016008.1; plasmid pNGF1_pCol_let_like:NZ_CP016009.1/CP016009.1	-	3	5156	4837	6/9/16	2/25/17	Complete Genome	Harvard University	SAMN05194365	GCA_001660585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/585/GCA_001660585.1_ASM166058v1	-	NGF1
Treponema denticola ATCC 35404	999430	PRJNA64911	64911	Spirochaetes	Spirochaetia	2.77151	38.0502	chromosome:NZ_CM001796.1/CM001796.1	AGDU01	1	5211	5000	2/7/13	4/1/17	Chromosome	Broad Institute	SAMN02596720	GCA_000340685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/685/GCA_000340685.1_Trep_dent_ATCC_35404_V1	-	ATCC 35404
Bacteroides uniformis dnLKV2	1235787	PRJNA175976	175976	FCB group	Bacteroidetes/Chlorobi group	4.83551	46.5	-	ASSO01	11	4086	3882	5/29/13	4/1/17	Scaffold	Broad Institute	SAMN01730985	GCA_000403175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/175/GCA_000403175.2_Bact_unif_dnLKV2_V1	-	dnLKV2
Parabacteroides merdae	46503	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	4.30581	45.3	-	CZAG01	20	3619	3399	10/1/15	6/12/17	Contig	SC	SAMEA3545314	GCA_001404575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/575/GCA_001404575.1_13470_2_67	-	2789STDY5834848
Collinsella aerofaciens	74426	PRJEB10915	297013	Terrabacteria group	Actinobacteria	2.1372	60	-	CYYF01	44	1873	1775	10/1/15	4/11/17	Contig	SC	SAMEA3545250	GCA_001406575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/575/GCA_001406575.1_13414_6_26	-	2789STDY5608842
[Clostridium] bolteae 90B8	997897	PRJNA64853	64853	Terrabacteria group	Firmicutes	6.48269	48.6	-	AGYG01	21	6075	5810	4/19/13	5/19/17	Scaffold	Broad Institute	SAMN02596757	GCA_000371645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/645/GCA_000371645.1_Clos_bolt_90B8_V1	-	90B8
Bacteroides ovatus 3_8_47FAA	665954	PRJNA40011	40011	FCB group	Bacteroidetes/Chlorobi group	6.54948	42	-	ACWH01	25	5134	4933	6/13/11	5/18/17	Scaffold	Broad Institute	SAMN02463791	GCA_000218325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/325/GCA_000218325.1_Bact_ovat_3_8_47FAA_V1	-	3_8_47FAA
Bacteroides caccae	47678	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	5.29186	42.6	-	CZBL01	44	4557	4312	10/1/15	4/11/17	Contig	SC	SAMEA3545409	GCA_001405515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/515/GCA_001405515.1_14207_7_69	-	2789STDY5834946
Dorea longicatena	88431	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.41105	41.3	-	CZAY01	48	3263	3091	10/1/15	4/4/17	Contig	SC	SAMEA3545377	GCA_001404875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/875/GCA_001404875.1_14207_7_37	-	2789STDY5834914
[Clostridium] symbiosum	1512	PRJEB10915	297013	Terrabacteria group	Firmicutes	4.72713	47.9	-	CYZY01	186	4361	4056	10/1/15	4/11/17	Contig	SC	SAMEA3545330	GCA_001406475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/475/GCA_001406475.1_13470_2_83	-	2789STDY5834864
[Ruminococcus] gnavus	33038	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.10981	42.9	-	CYZG01	50	3030	2860	10/1/15	4/11/17	Contig	SC	SAMEA3545260	GCA_001406655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/655/GCA_001406655.1_13414_6_36	-	2789STDY5608852
[Eubacterium] hallii	39488	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.70516	38.2	-	CYZL01	72	3354	3155	10/1/15	4/11/17	Contig	SC	SAMEA3545301	GCA_001405175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/175/GCA_001405175.1_13470_2_54	-	2789STDY5834835
Blautia obeum	40520	PRJEB10915	297013	Terrabacteria group	Firmicutes	4.29504	41.5	-	CZBP01	86	4020	3742	10/1/15	4/4/17	Contig	SC	SAMEA3545420	GCA_001404775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/775/GCA_001404775.1_14207_7_80	-	2789STDY5834957
[Ruminococcus] torques	33039	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.32653	40.9	-	CZBR01	26	3149	2975	10/1/15	4/4/17	Contig	SC	SAMEA3545241	GCA_001405415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/415/GCA_001405415.1_13414_6_17	-	2789STDY5608833
Escherichia coli	562	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.47541	50.6154	chromosome:CP023535.1; plasmid unnamed1:CP023534.1; plasmid unnamed2:CP023533.1; plasmid unnamed3:CP023532.1	-	4	5810	5343	9/28/17	9/28/17	Complete Genome	US Food and Drug Administration 	SAMN07312447	GCA_002393365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/365/GCA_002393365.1_ASM239336v1	-	FDAARGOS_403
Coprococcus comes	410072	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.42403	42	-	CZAX01	43	3351	3144	10/1/15	4/11/17	Contig	SC	SAMEA3545376	GCA_001405795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/795/GCA_001405795.1_14207_7_36	-	2789STDY5834913
Bacteroides intestinalis	329854	PRJEB8298	276428	FCB group	Bacteroidetes/Chlorobi group	5.82766	43.5	-	CDQR01	2844	-	-	2/24/15	3/15/15	Contig	CGS-GL	SAMEA3217994	GCA_001373115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/115/GCA_001373115.1_4d10B_assembly	-	4d10B
Escherichia coli	562	PRJNA241122	241122	Proteobacteria	Gammaproteobacteria	5.45741	50.6153	chromosome:NZ_CP013663.1/CP013663.1; plasmid pCFSAN004181P:NZ_CP012499.1/CP012499.1	-	2	5790	5404	7/5/16	2/25/17	Complete Genome	FDA	SAMN02688215	GCA_001678965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/965/GCA_001678965.1_ASM167896v1	-	GB089
Clostridium sporogenes PA 3679	1075091	PRJNA71727	71727	Terrabacteria group	Firmicutes	4.18027	27.9	-	AGAH01	107	4044	3780	12/21/11	6/15/17	Scaffold	CSIRO Food and Nutritional Sciences	SAMN02469693	GCA_000240115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/115/GCA_000240115.1_ASM24011v1	22374960	PA 3679
Intestinibacter bartlettii DORA_8_9	1403940	PRJNA221485	221485	Terrabacteria group	Firmicutes	2.17653	28.8	-	AZLW01	405	2139	2139	12/16/13	12/16/13	Contig	"University of California, Berkeley"	SAMN02316559	GCA_000508445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/445/GCA_000508445.1_CloBart_DORA_8_9_velvet_1.1	-	-
Anaerotruncus colihominis	169435	PRJNA377666	377666	Terrabacteria group	Firmicutes	4.07935	53.5	-	NFKP01	98	4157	3950	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473639	GCA_002160445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/445/GCA_002160445.1_ASM216044v1	-	An175
[Eubacterium] siraeum 70/3	657319	PRJNA39157	39157	Terrabacteria group	Firmicutes	2.94341	45	chromosome:FP929044.1	-	1	2398	2347	3/25/10	2/27/15	Chromosome	MetaHIT	SAMEA3138355	GCA_000209915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/209/915/GCA_000209915.1_ASM20991v1	-	70/3
[Clostridium] spiroforme	29348	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.82313	28.9	-	NFLB01	36	2673	2506	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473619	GCA_002160695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/695/GCA_002160695.1_ASM216069v1	-	An149
Burkholderia glumae 3252-8	1248414	PRJNA178518	178518	Proteobacteria	Betaproteobacteria	6.11578	67.7	-	AQOM01	1730	5647	4787	4/15/13	5/18/17	Contig	Colorado State University	SAMN02469649	GCA_000365245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/245/GCA_000365245.1_Burkholderia_glumae_3252-8	24261408	3252-8
Dickeya dadantii NCPPB 3537	1224149	PRJNA172953	172953	Proteobacteria	Gammaproteobacteria	4.80845	56.484	chromosome:NZ_CM001982.1/CM001982.1	AOOL01	12	4292	4090	6/4/13	4/8/17	Chromosome	James Hutton Institute	SAMN02470102	GCA_000406265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/265/GCA_000406265.1_DDA3537_1.0	24265502	NCPPB 3537
Brucella pinnipedialis B2/94	520461	PRJNA33039	33039	Proteobacteria	Alphaproteobacteria	3.39867	57.1	-	ACBN01	19	3392	3204	1/23/09	4/7/17	Scaffold	Broad Institute	SAMN02595282	GCA_000157815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/815/GCA_000157815.1_ASM15781v1	-	B2/94
Escherichia coli O104:H4 str. C227-11	1048254	PRJNA281410	281410	Proteobacteria	Gammaproteobacteria	5.44601	50.6146	chromosome:NZ_CP011331.1/CP011331.1; plasmid unnamed:NZ_CP011337.1/CP011337.1; plasmid unnamed:NZ_CP011335.1/CP011335.1; plasmid unnamed:NZ_CP011338.1/CP011338.1; plasmid unnamed:NZ_CP011336.1/CP011336.1; plasmid unnamed:NZ_CP011332.1/CP011332.1; plasmid unnamed:NZ_CP011334.1/CP011334.1; plasmid unnamed:NZ_CP011333.1/CP011333.1	-	8	5783	5335	4/30/15	2/23/17	Complete Genome	Icahn School of Medicine at Mount Sinai	SAMN03856947	GCA_000986765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/986/765/GCA_000986765.1_ASM98676v1	26074426	C227-11
Escherichia coli	562	PRJNA248607	248607	Proteobacteria	Gammaproteobacteria	5.19583	50.6142	chromosome:NZ_CP008697.1/CP008697.1; plasmid pEC648_1:NZ_CP008715.1/CP008715.1; plasmid pEC648_2:NZ_CP008716.1/CP008716.1; plasmid pEC648_3:NZ_CP008717.1/CP008717.1; plasmid pEC648_4:NZ_CP008718.1/CP008718.1; plasmid pEC648_5:NZ_CP008719.1/CP008719.1; plasmid pEC648_6:NZ_CP008720.1/CP008720.1; plasmid pEC648_7:NZ_CP008721.1/CP008721.1	-	8	5335	4888	1/5/16	2/25/17	Complete Genome	Peking University People's hospital	SAMN02800875	GCA_001485455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/455/GCA_001485455.1_ASM148545v1	-	ST648
Enterococcus gallinarum	1353	PRJNA239493	239493	Terrabacteria group	Firmicutes	3.4751	40.2	-	JNLR01	6	3385	3149	6/11/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02841216	GCA_000703185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/185/GCA_000703185.1_ASM70318v1	-	SKF1
Enterococcus casseliflavus ATCC 12755	888066	PRJNA53041	53041	Terrabacteria group	Firmicutes	3.6008	42.5	-	AEWT01	16	3431	3243	3/3/11	3/30/17	Scaffold	Baylor College of Medicine	SAMN00253302	GCA_000191365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/365/GCA_000191365.1_ASM19136v1	-	ATCC 12755
Brucella ceti M490/95/1	520458	PRJNA33571	33571	Proteobacteria	Alphaproteobacteria	3.34547	57.1	-	ACEJ01	17	3329	3109	2/18/09	4/10/17	Scaffold	Broad Institute	SAMN02595291	GCA_000158755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/755/GCA_000158755.1_ASM15875v1	-	M490/95/1
Escherichia coli	562	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.37521	50.6135	chromosome:NZ_CP013029.1/CP013029.1; plasmid unnamed1:NZ_CP013028.1/CP013028.1; plasmid unnamed2:NZ_CP013030.1/CP013030.1	-	3	5778	5105	10/30/15	3/5/17	Complete Genome	CDC	SAMN03952643	GCA_001420935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/935/GCA_001420935.1_ASM142093v1	26679598	2012C-4227
Vibrio splendidus 0407ZC148	1191312	PRJNA167017	167017	Proteobacteria	Gammaproteobacteria	5.49772	44.2	-	AJZK01	282	4898	4729	6/25/12	5/19/17	Contig	Broad Institute	SAMN02470445	GCA_000272285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/285/GCA_000272285.1_Vib-0407ZC148	22955834	0407ZC148
Escherichia coli	562	PRJNA316786	316786	Proteobacteria	Gammaproteobacteria	5.27603	50.6119	chromosome:NZ_CP018976.1/CP018976.1; plasmid pEC545_1:NZ_CP018975.1/CP018975.1; plasmid pEC545_3:NZ_CP018973.1/CP018973.1; plasmid pEC545_4:NZ_CP018972.1/CP018972.1; plasmid pEC545_5:NZ_CP018971.1/CP018971.1; plasmid pEC545_KPC:NZ_CP018974.1/CP018974.1	-	6	5461	5119	3/3/17	3/6/17	Complete Genome	University of Oxford	SAMN05511169	GCA_002012045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/045/GCA_002012045.1_ASM201204v1	-	Ecol_545
Francisella tularensis subsp. novicida	264	PRJNA244559	244559	Proteobacteria	Gammaproteobacteria	1.97234	32.3	-	JOOT01	4	1934	1780	8/19/14	4/2/17	Scaffold	Los Alamos National Laboratory	SAMN02870033	GCA_000742085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/085/GCA_000742085.1_ASM74208v1	25291764	FAI
Mycobacterium leprae 3125609	1297123	PRJNA322730	322730	Terrabacteria group	Actinobacteria	3.26642	57.7	-	LYPH01	107	2979	2139	5/30/16	4/12/17	Scaffold	Eurofins Genomics India Pvt Ltd.	SAMN05172957	GCA_001653495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/495/GCA_001653495.1_ASM165349v1	-	3125609
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.207	50.6116	chromosome:NZ_CP012635.1/CP012635.1; plasmid pSF-088-1:NZ_CP012636.1/CP012636.1; plasmid pSF-088-2:NZ_CP012637.1/CP012637.1; plasmid pSF-088-3:NZ_CP012638.1/CP012638.1	-	4	5451	5085	9/9/15	2/24/17	Complete Genome	Santa Clara University	SAMN04026225	GCA_001280325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/325/GCA_001280325.1_ASM128032v1	26543109	SF-088
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.02518	50.6091	chromosome:NZ_CP012633.1/CP012633.1; plasmid pSF-166-1:NZ_CP012634.1/CP012634.1	-	2	5179	4861	9/9/15	2/24/17	Complete Genome	Santa Clara University	SAMN04026226	GCA_001280385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/385/GCA_001280385.1_ASM128038v1	26543109	SF-166
Escherichia coli UM146	869729	PRJNA50883	50883	Proteobacteria	Gammaproteobacteria	5.10756	50.609	chromosome:NC_017632.1/CP002167.1; plasmid pUM146:NC_017630.1/CP002168.1	-	2	5286	4862	9/24/10	2/22/17	Complete Genome	MBRI	SAMN00017915	GCA_000148605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/605/GCA_000148605.1_ASM14860v1	21075930	UM146
Escherichia coli	562	PRJNA307507	307507	Proteobacteria	Gammaproteobacteria	5.17604	50.6088	chromosome:NZ_CP014495.1/CP014495.1; plasmid pSaT040:NZ_CP014496.1/CP014496.1	-	2	5384	5027	2/23/16	2/25/17	Complete Genome	University of Minnesota	SAMN04381849	GCA_001566615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/615/GCA_001566615.1_ASM156661v1	-	SaT040
Escherichia coli RS218	439184	PRJNA228944	228944	Proteobacteria	Gammaproteobacteria	5.20187	50.6088	chromosome:NZ_CP007149.1/CP007149.1; plasmid pRS218:NZ_CP007150.1/CP007150.1	-	2	5415	4877	2/13/15	3/5/17	Complete Genome	Penn State University	SAMN03339595	GCA_000800845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/845/GCA_000800845.2_ASM80084v2	26205862	RS218
Escherichia coli UTI89	364106	PRJNA16259	16259	Proteobacteria	Gammaproteobacteria	5.17997	50.6088	chromosome:NC_007946.1/CP000243.1; plasmid pUTI89:NC_007941.1/CP000244.1	-	2	5363	5038	4/5/06	2/22/17	Complete Genome	Washington University (WashU)	SAMN00000110	GCA_000013265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/265/GCA_000013265.1_ASM1326v1	16585510	UTI89
Helicobacter pullorum	35818	PRJNA321246	321246	Proteobacteria	delta/epsilon subdivisions	1.88908	34.2	-	LXWI01	162	1941	1801	8/4/16	4/5/17	Contig	University of Hyderabad	SAMN04978444	GCA_001698605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/605/GCA_001698605.1_ASM169860v1	-	NAP1W4
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.35864	50.6061	chromosome:NZ_CP012625.1/CP012625.1; plasmid pSF-468-1:NZ_CP012626.1/CP012626.1; plasmid pSF-468-2:NZ_CP012627.1/CP012627.1; plasmid pSF-468-3:NZ_CP012628.1/CP012628.1; plasmid pSF-468-4:NZ_CP012629.1/CP012629.1; plasmid pSF-468-5:NZ_CP012630.1/CP012630.1	-	6	5683	5311	9/9/15	2/24/17	Complete Genome	Santa Clara University	SAMN04026228	GCA_001280345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/345/GCA_001280345.1_ASM128034v1	26543109	SF-468
Micrococcus luteus NCTC 2665	465515	PRJEA30571	30571	Terrabacteria group	Actinobacteria	2.32059	73	-	CABC01	134	2259	1976	11/5/08	3/30/17	Contig	IG/CEA	SAMEA2272752	GCA_000180435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/180/435/GCA_000180435.1_ASM18043v1	-	type strain: DSM 20030 = NCTC 2665
Escherichia coli	562	PRJNA323357	323357	Proteobacteria	Gammaproteobacteria	5.42419	50.6015	chromosome:NZ_CP015912.1/CP015912.1; plasmid pSLy1:NZ_CP015913.1/CP015913.1; plasmid pSLy2:NZ_CP015914.1/CP015914.1; plasmid pSLy3:NZ_CP015915.1/CP015915.1; plasmid pSLy4:NZ_CP015916.1/CP015916.1; plasmid pSLy5:NZ_CP015917.1/CP015917.1	-	6	5691	5294	7/6/16	2/25/17	Complete Genome	Agricultural Research Service	SAMN05177221	GCA_001679985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/985/GCA_001679985.1_ASM167998v1	-	210205630
Escherichia coli ABU 83972	655817	PRJNA38725	38725	Proteobacteria	Gammaproteobacteria	5.13296	50.6001	chromosome:NC_017631.1/CP001671.1; plasmid pABU:NC_017629.1/CP001833.1	-	2	5282	4942	9/22/10	2/22/17	Complete Genome	Georg-August-University Goettingen	SAMN02603258	GCA_000148365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/365/GCA_000148365.1_ASM14836v1	20865122	ABU 83972
Yersinia kristensenii	28152	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.42033	47.4	-	CQAW01	56	4095	3879	3/23/15	4/3/17	Contig	SC	SAMEA859923	GCA_001123825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/825/GCA_001123825.1_5139_2_1	-	IP6945
Yersinia frederiksenii	29484	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.86092	47.5	-	MWTI01	49	4461	3765	6/14/17	6/14/17	Contig	SRCAMB	SAMN06344229	GCA_002192815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/815/GCA_002192815.1_ASM219281v1	-	SCPM-O-B-7604
Escherichia coli	562	PRJNA355857	355857	Proteobacteria	Gammaproteobacteria	4.75972	50.6	chromosome:NZ_CP018840.1/CP018840.1	-	1	4852	4482	6/2/17	6/5/17	Complete Genome	University of Guelph	SAMN06165994	GCA_002163695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/695/GCA_002163695.1_ASM216369v1	-	-
Comamonas testosteroni KF-1	399795	PRJNA17465	17465	Proteobacteria	Betaproteobacteria	6.02653	61.8	-	AAUJ02	1	5555	5328	11/15/06	5/18/17	Contig	DOE Joint Genome Institute	SAMN02441780	GCA_000168855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/855/GCA_000168855.1_ASM16885v1	15240283	KF-1
Ruminococcaceae bacterium CPB6	1572656	PRJNA381117	381117	Terrabacteria group	Firmicutes	2.06999	50.6	chromosome:NZ_CP020705.1/CP020705.1	-	1	2045	1932	5/9/17	5/22/17	Complete Genome	Chengdu Institute of Biology	SAMN06670444	GCA_002119605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/605/GCA_002119605.1_ASM211960v1	-	CPB6
Streptomyces clavuligerus ATCC 27064	443255	PRJNA28551	28551	Terrabacteria group	Actinobacteria	6.94174	70.3	-	ABJH01	158	6157	5397	2/28/08	5/19/17	Scaffold	Broad Institute	SAMN02595221	GCA_000154925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/925/GCA_000154925.1_ASM15492v1	-	ATCC 27064
Escherichia coli	562	PRJNA378593	378593	Proteobacteria	Gammaproteobacteria	5.11248	50.6	chromosome:NZ_CP020092.1/CP020092.1	-	1	5401	4975	3/21/17	3/23/17	Complete Genome	Friedrich-Loeffler-Institut	SAMN06554468	GCA_002055605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/605/GCA_002055605.1_ASM205560v1	-	13E0725
Escherichia coli	562	PRJNA378906	378906	Proteobacteria	Gammaproteobacteria	5.37129	50.6	chromosome:NZ_CP020106.1/CP020106.1	-	1	5786	5346	3/21/17	3/23/17	Complete Genome	Friedrich-Loeffler-Institut	SAMN06563569	GCA_002057245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/245/GCA_002057245.1_ASM205724v1	-	13E0780
Escherichia coli	562	PRJNA378908	378908	Proteobacteria	Gammaproteobacteria	4.94225	50.6	chromosome:NZ_CP020107.1/CP020107.1	-	1	5142	4813	3/21/17	3/23/17	Complete Genome	Friedrich-Loeffler-Institut	SAMN06563579	GCA_002057355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/355/GCA_002057355.1_ASM205735v1	-	13E0767
Escherichia coli NU14	569579	PRJNA373796	373796	Proteobacteria	Gammaproteobacteria	5.07662	50.6	chromosome:NZ_CP019777.1/CP019777.1	-	1	5219	4908	3/10/17	3/13/17	Complete Genome	National University of Singapore and Genome Institute of Singapore	SAMN06314223	GCA_002024865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/865/GCA_002024865.1_ASM202486v1	-	NU14
Propionimicrobium sp. Marseille-P3275	1871034	PRJEB18935	361099	Terrabacteria group	Actinobacteria	2.01068	50.6	chromosome contig00001:NZ_LT706985.1/LT706985.1	-	1	1867	1762	1/14/17	4/16/17	Complete Genome	URMITE	SAMEA48205918	GCA_900155645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/645/GCA_900155645.1_Propionibacterium_massiliense	-	Marseille-P3275
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	4.99048	50.6	chromosome:NZ_CP010121.1/CP010121.1	-	1	5050	4779	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252412	GCA_001900315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/315/GCA_001900315.1_ASM190031v1	-	C4
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	5.04371	50.6	chromosome:NZ_CP010237.1/CP010237.1	-	1	5145	4768	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252456	GCA_001900985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/985/GCA_001900985.1_ASM190098v1	-	S43
Lachnoclostridium phocaeense	1871021	PRJEB18024	354765	Terrabacteria group	Firmicutes	3.50075	50.6	chromosome contig00001:NZ_LT635479.1/LT635479.1	-	1	3410	3258	11/23/16	4/16/17	Complete Genome	URMITE	SAMEA4555314	GCA_900120345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/345/GCA_900120345.1_PRJEB18024	-	Marseille-P3177
Pectobacterium wasabiae CFBP 3304	1175631	PRJNA320083	320083	Proteobacteria	Gammaproteobacteria	5.04323	50.6	chromosome:NZ_CP015750.1/CP015750.1	-	1	4707	4416	9/22/16	4/13/17	Complete Genome	Institute for integrative biology of the cell	SAMN04915576	GCA_001742185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/185/GCA_001742185.1_ASM174218v1	-	CFBP 3304
Escherichia coli	562	PRJNA294502	294502	Proteobacteria	Gammaproteobacteria	5.7044	50.6	chromosome:NZ_CP012693.1/CP012693.1	-	1	6174	5740	9/7/16	2/25/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN04026657	GCA_001721125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/125/GCA_001721125.1_ASM172112v1	-	FORC_028
Bifidobacterium dentium ATCC 27678	473819	PRJNA20555	20555	Terrabacteria group	Actinobacteria	2.64208	58.5	-	ABIX02	2	2245	2149	1/2/08	3/30/17	Contig	Washington University Genome Sequencing Center	SAMN00000021	GCA_000172135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/135/GCA_000172135.1_ASM17213v1	-	ATCC 27678
Methanobrevibacter smithii TS145A	911116	PRJNA59547	59547	Euryarchaeota	Methanobacteria	1.78257	31.1	-	AEKU01	44	1744	1588	2/17/11	3/30/17	Contig	Washington University in St.Louis	SAMN02436678	GCA_000189795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/795/GCA_000189795.2_ASM18979v2	21317366	TS145A
Lacimicrobium alkaliphilum	1526571	PRJNA305323	305323	Proteobacteria	Gammaproteobacteria	4.37883	50.6	chromosome:NZ_CP013650.1/CP013650.1	-	1	3928	3785	12/15/15	4/11/17	Complete Genome	Korean Research Institute of BioSicence and BioTechnology	SAMN04324273	GCA_001466725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/725/GCA_001466725.1_ASM146672v1	-	YelD216
Bradyrhizobium japonicum SEMIA 5079	476282	PRJNA20963	20963	Proteobacteria	Alphaproteobacteria	9.58303	63.5	chromosome:NZ_CP007569.1/CP007569.1	-	1	9143	8675	5/1/14	4/2/17	Chromosome	LNCC - National Laboratory of Scientfic Computation	SAMN02726028	GCA_000661935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/935/GCA_000661935.1_ASM66193v1	24888481	SEMIA 5079
Burkholderia ambifaria	152480	PRJNA296767	296767	Proteobacteria	Betaproteobacteria	8.0959	65.7	-	LKPJ01	82	7551	7000	11/12/15	4/11/17	Scaffold	ESALQ/USP	SAMN04103537	GCA_001443045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/443/045/GCA_001443045.1_ASM144304v1	26988044	RZ2MS16
Escherichia coli	562	PRJNA300553	300553	Proteobacteria	Gammaproteobacteria	4.8635	50.6	chromosome:NZ_CP013112.1/CP013112.1	-	1	5018	4636	11/10/15	2/25/17	Complete Genome	"Huashan Hospital, Fudan University"	SAMN04227566	GCA_001442495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/495/GCA_001442495.1_ASM144249v1	-	YD786
Escherichia coli APEC O2-211	1954351	PRJNA219410	219410	Proteobacteria	Gammaproteobacteria	5.11251	50.6	chromosome:NZ_CP006834.1/CP006834.1	-	1	5318	4925	6/8/15	5/9/17	Complete Genome	Iowa State University	SAMN03761814	GCA_001021635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/635/GCA_001021635.1_ASM102163v1	-	APEC O2-211
Mycobacterium marinum str. Europe	1229516	PRJNA174279	174279	Terrabacteria group	Actinobacteria	6.02934	65.6	-	ANPL01	4	5305	4967	7/8/13	4/8/17	Contig	Gyeongsang National University	SAMN02469865	GCA_000419315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/315/GCA_000419315.1_Europe	-	Europe
Escherichia coli O157:H16	930406	PRJNA240262	240262	Proteobacteria	Gammaproteobacteria	5.10456	50.6	chromosome:NZ_CP007592.1/CP007592.1	-	1	5199	4838	1/21/15	2/23/17	Complete Genome	BGI	SAMN02673556	GCA_000827105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/827/105/GCA_000827105.1_ASM82710v1	-	Santai
Paenibacillus graminis	189425	PRJNA258365	258365	Terrabacteria group	Firmicutes	7.16646	50.6	chromosome:NZ_CP009287.1/CP009287.1	-	1	6291	6005	9/22/14	4/9/17	Complete Genome	Cornell University	SAMN02996720	GCA_000758705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/705/GCA_000758705.1_ASM75870v1	-	DSM 15220
Escherichia coli Nissle 1917	316435	PRJNA248167	248167	Proteobacteria	Gammaproteobacteria	5.4412	50.6	chromosome:NZ_CP007799.1/CP007799.1	-	1	5720	5084	6/27/14	2/23/17	Complete Genome	"Bioifnormatik, Biozentrum, Uni Wuerzburg"	SAMN02794012	GCA_000714595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/595/GCA_000714595.1_ASM71459v1	25093936	Nissle 1917
Ochrobactrum anthropi	529	PRJNA238403	238403	Proteobacteria	Alphaproteobacteria	5.27782	56.3	-	JENZ01	43	5158	4947	3/5/14	4/2/17	Scaffold	Tianjin University	SAMN02644454	GCA_000585655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/655/GCA_000585655.1_Ochant_v5	26227610	W13P3
Escherichia coli str. 'clone D i2'	885276	PRJNA52021	52021	Proteobacteria	Gammaproteobacteria	5.03839	50.6	chromosome:NC_017651.1/CP002211.1	-	1	5143	4822	11/3/11	2/22/17	Complete Genome	"TEDA School of Biological Sciences and Biotechnology, Nankai University"	SAMN02603902	GCA_000233875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/875/GCA_000233875.1_ASM23387v1	22046404	clone D i2
Treponema pallidum subsp. pertenue str. CDC2	491079	PRJNA30651	30651	Spirochaetes	Spirochaetia	1.13974	52.8	chromosome:NC_016848.1/CP002375.1	-	1	1066	1006	2/6/12	3/30/17	Chromosome	Baylor College of Medicine	SAMN02603003	GCA_000246775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/775/GCA_000246775.1_ASM24677v1	-	CDC2
Escherichia coli str. 'clone D i14'	885275	PRJNA52023	52023	Proteobacteria	Gammaproteobacteria	5.03839	50.6	chromosome:NC_017652.1/CP002212.1	-	1	5142	4821	11/3/11	2/22/17	Complete Genome	"TEDA School of Biological Sciences and Biotechnology, Nankai University"	SAMN02603903	GCA_000233895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/895/GCA_000233895.1_ASM23389v1	22046404	clone D i14
Sphaerochaeta coccoides DSM 17374	760011	PRJNA48121	48121	Spirochaetes	Spirochaetia	2.2273	50.6	chromosome:NC_015436.1/CP002659.1	-	1	1918	1846	4/21/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713608	GCA_000208385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/208/385/GCA_000208385.1_ASM20838v1	22768363	DSM 17374
Escherichia coli IAI39	585057	PRJNA33411	33411	Proteobacteria	Gammaproteobacteria	5.13207	50.6	chromosome:NC_011750.1/CU928164.2	-	1	5092	4725	12/16/08	8/28/16	Complete Genome	Genoscope	SAMEA3138234	GCA_000026345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/345/GCA_000026345.1_ASM2634v1	19165319	IAI39
Burkholderia oklahomensis C6786	441162	PRJNA19535	19535	Proteobacteria	Betaproteobacteria	6.98761	67.1	-	ABBG01	633	6753	5929	6/6/07	5/18/17	Contig	NMRC	SAMN02470663	GCA_000170375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/375/GCA_000170375.1_ASM17037v1	-	C6786
Bdellovibrio bacteriovorus HD100	264462	PRJNA9637	9637	Proteobacteria	Oligoflexia	3.78295	50.6	chromosome:NC_005363.1/BX842601.2	-	1	3597	3548	1/31/04	8/14/17	Complete Genome	Max-Planck-Institute	SAMEA3138335	GCA_000196175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/175/GCA_000196175.1_ASM19617v1	14752164	HD100
Shigella flexneri 1a	374923	PRJNA377966	377966	Proteobacteria	Gammaproteobacteria	4.89977	50.5999	chromosome:NZ_CP020086.1/CP020086.1; plasmid unnamed1:NZ_CP020087.1/CP020087.1; plasmid unnamed2:NZ_CP020088.1/CP020088.1	-	3	5382	4466	8/2/17	8/4/17	Complete Genome	Hangzhou Normal University	SAMN06478366	GCA_002240135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/135/GCA_002240135.1_ASM224013v1	-	670
Aliivibrio fischeri	668	PRJEB9149	282338	Proteobacteria	Gammaproteobacteria	4.2505	38.3	-	CVOI01	54	3911	3776	4/25/15	4/3/17	Contig	CENTRE OF MARINE SCIENCES	SAMEA3355991	GCA_000985635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/635/GCA_000985635.1_5LC	-	5LC
Escherichia coli O145:H28 str. RM12761	1248903	PRJNA178649	178649	Proteobacteria	Gammaproteobacteria	5.55901	50.5948	chromosome:NZ_CP007133.1/CP007133.1; plasmid pO145-12761:NZ_CP007135.1/CP007135.1; plasmid pRM12761:NZ_CP007134.1/CP007134.1	-	3	5901	5419	5/1/14	2/23/17	Complete Genome	"USDA, ARS, WRRC, PSM"	SAMN03081526	GCA_000662395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/395/GCA_000662395.1_ASM66239v1	24855308	RM12761
Ureaplasma urealyticum serovar 7 str. ATCC 27819	519849	PRJNA19093	19093	Terrabacteria group	Tenericutes	0.894015	26	-	AAYP01	12	706	643	3/21/07	3/30/17	Contig	TIGR	SAMN02435845	GCA_000169575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/575/GCA_000169575.2_ASM16957v2	-	ATCC 27819
Escherichia coli O145:H28 str. RM13516	1248915	PRJNA178650	178650	Proteobacteria	Gammaproteobacteria	5.55901	50.5948	chromosome:NZ_CP006262.1/CP006262.1; plasmid pO145-13516:NZ_CP006263.1/CP006263.1; plasmid pRM13516:NZ_CP006264.1/CP006264.1	-	3	5899	5418	1/14/14	2/23/17	Complete Genome	"USDA, ARS, WRRC, PSM"	SAMN02641384	GCA_000520055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/055/GCA_000520055.1_ASM52005v1	24410921	RM13516
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	5.41327	50.5871	chromosome:NZ_CP010119.1/CP010119.1; plasmid A:NZ_CP010120.1/CP010120.1	-	2	5753	5368	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252411	GCA_001900515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/515/GCA_001900515.1_ASM190051v1	-	C3
Escherichia coli	562	PRJNA287563	287563	Proteobacteria	Gammaproteobacteria	5.03526	50.5868	chromosome:NZ_CP011915.1/CP011915.1; plasmid pPSUO2:NZ_CP011916.1/CP011916.1	-	2	5181	4795	7/6/17	7/8/17	Complete Genome	Pennsylvania State University	SAMN03783363	GCA_002215095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/095/GCA_002215095.1_ASM221509v1	-	PSUO2
Escherichia coli 1303	745156	PRJNA46529	46529	Proteobacteria	Gammaproteobacteria	5.15693	50.5867	chromosome:NZ_CP009166.1/CP009166.1; plasmid p1303_109:NZ_CP009167.1/CP009167.1; plasmid p1303_5:NZ_CP009169.1/CP009169.1; plasmid p1303_95:NZ_CP009168.1/CP009168.1	-	4	5284	4917	1/29/15	3/22/17	Complete Genome	Georg-August-University Goettingen	SAMN02949643	GCA_000829985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/985/GCA_000829985.1_ASM82998v1	-	1303
Orientia tsutsugamushi str. Kato PP	1359186	PRJNA212441	212441	Proteobacteria	Alphaproteobacteria	1.47844	30	-	LANN01	137	1549	1016	3/27/15	4/3/17	Contig	IGS	SAMN02692924	GCA_000964605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/605/GCA_000964605.1_ASM96460v1	-	Kato PP
Methylobacterium radiotolerans	31998	PRJNA272573	272573	Proteobacteria	Alphaproteobacteria	6.78865	71.2	-	JXTO01	271	6344	4835	2/20/15	5/27/15	Contig	Hasselt University	SAMN03283902	GCA_000878385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/385/GCA_000878385.1_ASM87838v1	25977414	78c
Escherichia coli	562	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	5.43596	50.5811	chromosome:NZ_CP021535.1/CP021535.1; plasmid unitig_2:NZ_CP021536.1/CP021536.1; plasmid unitig_3:NZ_CP021537.1/CP021537.1; plasmid unitig_4:NZ_CP021538.1/CP021538.1	-	4	5792	5346	6/8/17	6/10/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014960	GCA_002180095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/095/GCA_002180095.1_ASM218009v1	-	AR_0149
Escherichia coli 042	216592	PRJEA40647	40647	Proteobacteria	Gammaproteobacteria	5.35532	50.5767	chromosome:NC_017626.1/FN554766.1; plasmid pAA:NC_017627.1/FN554767.1	-	2	5580	5216	1/28/10	2/22/17	Complete Genome	Wellcome Trust Sanger Institute	SAMEA2272277	GCA_000027125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/027/125/GCA_000027125.1_ASM2712v1	20098708	42
Lactococcus garvieae ATCC 49156	420889	PRJNA82563	82563	Terrabacteria group	Firmicutes	1.95065	38.9	-	AHYM01	5	1981	1854	5/31/13	4/1/17	Scaffold	Broad Institute	SAMN02596969	GCA_000407125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/125/GCA_000407125.1_Lact_garv_ATCC49156_V1	-	ATCC 49156
Bifidobacterium adolescentis L2-32	411481	PRJNA18197	18197	Terrabacteria group	Actinobacteria	2.38911	59.3	-	AAXD02	40	2060	1906	3/8/07	3/30/17	Scaffold	Washington University Genome Sequencing Center	SAMN00627056	GCA_000154085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/085/GCA_000154085.1_ASM15408v1	-	L2-32
Vibrio harveyi ZJ0603	1191522	PRJNA165825	165825	Proteobacteria	Gammaproteobacteria	6.69798	44.6	-	AKIH01	65	6491	6089	7/2/12	5/19/17	Scaffold	"Fisheries College, Guangdong Ocean University"	SAMN02469854	GCA_000275705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/705/GCA_000275705.1_VibHar1.0	23144396	ZJ0603
Faecalibacterium prausnitzii	853	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.0542	56	-	CYXN01	86	2956	2759	10/1/15	4/4/17	Contig	SC	SAMEA3545433	GCA_001406255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/255/GCA_001406255.1_14207_7_93	-	2789STDY5834970
Escherichia coli O7:K1 str. CE10	1072459	PRJNA63597	63597	Proteobacteria	Gammaproteobacteria	5.37873	50.5766	chromosome:NC_017646.1/CP003034.1; plasmid pCE10A:NC_017647.1/CP003035.1; plasmid pCE10B:NC_017648.1/CP003036.1; plasmid pCE10C:NC_017649.1/CP003037.1; plasmid pCE10D:NC_017650.1/CP003038.1	-	5	5575	5139	10/6/11	3/22/17	Complete Genome	"Institute of Pathogen Biology, CAMS&PUMC"	SAMN02603406	GCA_000227625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/625/GCA_000227625.1_ASM22762v1	22123760	CE10
Photobacterium damselae subsp. damselae	85581	PRJNA314299	314299	Proteobacteria	Gammaproteobacteria	4.48506	40.6	-	LYBT01	127	3965	3808	8/18/16	4/5/17	Scaffold	Universidade de Santiago de Compostela	SAMN04531896	GCA_001708035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/035/GCA_001708035.1_ASM170803v1	-	RM-71
Escherichia coli	562	PRJNA307507	307507	Proteobacteria	Gammaproteobacteria	5.21997	50.575	chromosome:NZ_CP014488.1/CP014488.1; plasmid pG749_1:NZ_CP014489.1/CP014489.1; plasmid pG749_2:NZ_CP014490.1/CP014490.1; plasmid pG749_3:NZ_CP014491.1/CP014491.1	-	4	5428	5073	2/23/16	2/25/17	Complete Genome	University of Minnesota	SAMN04381851	GCA_001566635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/635/GCA_001566635.1_ASM156663v1	-	G749
Geobacillus stearothermophilus	1422	PRJNA282772	282772	Terrabacteria group	Firmicutes	3.01193	52	-	LDNS01	435	3303	2660	7/21/15	4/3/17	Scaffold	Massey University	SAMN03651168	GCA_001183895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/895/GCA_001183895.1_ASM118389v1	26472822	A1
Ralstonia pickettii	329	PRJNA244358	244358	Proteobacteria	Betaproteobacteria	4.7656	63.9	-	JOVL01	1	4494	4308	8/25/14	4/2/17	Scaffold	Los Alamos National Laboratory	SAMN02870864	GCA_000743455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/455/GCA_000743455.1_RPT	25258272	ATCC 27511
Escherichia coli O6:H16	1446746	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	4.96556	50.5734	chromosome:NZ_CP022912.1/CP022912.1; plasmid unnamed1:NZ_CP022913.1/CP022913.1; plasmid unnamed2:NZ_CP022914.1/CP022914.1	-	3	5279	4627	8/24/17	8/27/17	Complete Genome	CDC	SAMN02951658	GCA_002269325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/325/GCA_002269325.1_ASM226932v1	-	2011EL-1370-2
Escherichia coli APEC IMT5155	1329907	PRJNA200980	200980	Proteobacteria	Gammaproteobacteria	5.12606	50.565	chromosome:NZ_CP005930.1/CP005930.1; plasmid p1ColV5155:NZ_CP005931.1/CP005931.1; plasmid p25155:NZ_CP005932.1/CP005932.1	-	3	5360	4895	1/2/15	2/23/17	Complete Genome	Nanjing Agricultural University	SAMN03274236	GCA_000813165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/165/GCA_000813165.1_ASM81316v1	25397580	APEC IMT5155
Rickettsia bellii str. RML An4	1359193	PRJNA212473	212473	Proteobacteria	Alphaproteobacteria	1.54388	31.6	-	LAOI01	1	1553	1365	3/27/15	4/10/17	Contig	IGS	SAMN02665819	GCA_000965005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/005/GCA_000965005.1_ASM96500v1	-	RML An4
Escherichia coli	562	PRJNA299666	299666	Proteobacteria	Gammaproteobacteria	5.6431	50.5639	chromosome:NZ_CP015020.1/CP015020.1; plasmid p28RC1:NZ_CP015021.1/CP015021.1	-	2	6020	5567	4/6/16	2/25/17	Complete Genome	USDA	SAMN04202540	GCA_001612475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/475/GCA_001612475.1_ASM161247v1	-	28RC1
Delftia acidovorans	80866	PRJNA244541	244541	Proteobacteria	Betaproteobacteria	6.77796	66.6	-	JOUB01	1	6073	5897	8/18/14	4/2/17	Scaffold	Los Alamos National Laboratory	SAMN02867546	GCA_000741825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/825/GCA_000741825.1_ASM74182v1	25237026	2167
Salinispora arenicola CNS051	1169178	PRJNA175171	175171	Terrabacteria group	Actinobacteria	5.85304	69.5	-	ARGX01	93	5287	4964	4/19/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441369	GCA_000375005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/005/GCA_000375005.1_ASM37500v1	-	CNS051
Escherichia coli	562	PRJNA402083	402083	Proteobacteria	Gammaproteobacteria	5.13591	50.5611	chromosome:NZ_CP023357.1/CP023357.1; plasmid p100:NZ_CP023358.1/CP023358.1	-	2	5244	4855	9/18/17	9/20/17	Complete Genome	The Roslin Institute	SAMN07618128	GCA_002310575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/575/GCA_002310575.1_ASM231057v1	-	317
Lactobacillus fermentum 3872	1381124	PRJNA213970	213970	Terrabacteria group	Firmicutes	2.33049	50.5599	chromosome:NZ_CP011536.1/CP011536.1; plasmid pLF3872:NZ_CP011537.1/CP011537.1	-	2	2367	2126	6/17/15	4/3/17	Complete Genome	Kingston University	SAMN02314197	GCA_000466785.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/785/GCA_000466785.3_ASM46678v3	"2,428,565,225,908,870"	3872
Escherichia coli O157:H7	83334	PRJNA322195	322195	Proteobacteria	Gammaproteobacteria	5.8662	50.5576	chromosome:NZ_CP016625.1/CP016625.1; plasmid p0157:NZ_CP016626.1/CP016626.1	-	2	6355	5873	7/27/16	2/25/17	Complete Genome	University of Florida	SAMN04510563	GCA_001695515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/515/GCA_001695515.1_ASM169551v1	-	FRIK944
Escherichia coli	562	PRJDB5007	382127	Proteobacteria	Gammaproteobacteria	5.3797	50.5573	chromosome:AP017610.1; plasmid pMRY16-002_1:AP017611.1; plasmid pMRY16-002_2:AP017612.1; plasmid pMRY16-002_3:AP017613.1; plasmid pMRY16-002_4:AP017614.1; plasmid pMRY16-002_5:AP017615.1; plasmid pMRY16-002_6:AP017616.1	-	7	5197	5076	4/7/17	4/7/17	Complete Genome	"Laboratory of Bacterial Genomics, Pathogen Genomics Center, National Institute of Infectious Diseases"	SAMD00056130	GCA_002357915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/915/GCA_002357915.1_ASM235791v1	-	20Ec-P-124
Desulfitobacterium hafniense TCP-A	872024	PRJNA74469	74469	Terrabacteria group	Firmicutes	4.96723	47.3	-	AQZD01	2	4839	4556	4/22/13	5/18/17	Scaffold	JGI	SAMN02261276	GCA_000378805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/805/GCA_000378805.1_ASM37880v1	-	TCP-A
Salinispora tropica CNT261	1288084	PRJNA187956	187956	Terrabacteria group	Actinobacteria	5.51033	69.4	-	AUKS01	96	5161	4801	7/10/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02440679	GCA_000424865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/865/GCA_000424865.1_ASM42486v1	-	CNT261
Escherichia coli	562	PRJNA383942	383942	Proteobacteria	Gammaproteobacteria	5.63676	50.5525	chromosome:NZ_CP021339.1/CP021339.1; plasmid p95NR1A:NZ_CP021340.1/CP021340.1; plasmid p95NR1B:NZ_CP021341.1/CP021341.1	-	3	6087	5562	5/23/17	5/25/17	Complete Genome	University of Queensland	SAMN06947002	GCA_002156845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/845/GCA_002156845.1_ASM215684v1	-	95NR1
Streptococcus mitis ATCC 6249	864567	PRJNA50515	50515	Terrabacteria group	Firmicutes	1.91589	41.3	-	AEEN01	8	1795	1738	8/24/10	3/30/17	Scaffold	Baylor College of Medicine	SAMN00116813	GCA_000146585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/146/585/GCA_000146585.1_ASM14658v1	-	ATCC 6249
Oenococcus oeni AWRIB304	1160702	PRJNA89139	89139	Terrabacteria group	Firmicutes	1.85224	37.9	-	AJIJ01	36	1897	1750	8/8/12	3/23/17	Contig	The Australian Wine Research Institute	SAMN02471120	GCA_000286015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/015/GCA_000286015.1_AWRIB304_v1	22863143	AWRIB304
Escherichia coli	562	PRJNA299765	299765	Proteobacteria	Gammaproteobacteria	5.60197	50.5524	chromosome:NZ_CP015023.1/CP015023.1; plasmid pSRCC 1675:NZ_CP015022.1/CP015022.1	-	2	5999	5576	4/6/16	2/25/17	Complete Genome	USDA	SAMN04202539	GCA_001612495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/495/GCA_001612495.1_ASM161249v1	-	SRCC 1675
Escherichia coli O127:H6 str. E2348/69	574521	PRJEA32571	32571	Proteobacteria	Gammaproteobacteria	5.06968	50.5524	chromosome:NC_011601.1/FM180568.1; plasmid pE2348-2:NC_011602.1/FM180570.1; plasmid pMAR2:NC_011603.1/FM180569.1	-	3	5388	4986	11/26/08	5/28/17	Complete Genome	Sanger Institute	SAMEA1705959	GCA_000026545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/545/GCA_000026545.1_ASM2654v1	18952797	E2348/69
Escherichia coli	562	PRJNA383943	383943	Proteobacteria	Gammaproteobacteria	5.51797	50.5514	chromosome:NZ_CP021335.1/CP021335.1; plasmid p95JB1A:NZ_CP021336.1/CP021336.1; plasmid p95JB1B:NZ_CP021337.1/CP021337.1	-	3	5919	5404	5/23/17	5/25/17	Complete Genome	University of Queensland	SAMN06924970	GCA_002156825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/825/GCA_002156825.1_ASM215682v1	-	95JB1
Bartonella bacilliformis San Pedro600-02	1427333	PRJNA229742	229742	Proteobacteria	Alphaproteobacteria	1.40382	38.2	-	JHPP01	5	1236	1153	3/28/14	4/2/17	Scaffold	Broad Institute	SAMN02419803	GCA_000607205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/205/GCA_000607205.1_Bart_baci_San_Pedro600-02_V1	-	San Pedro600-02
Escherichia coli	562	PRJNA294158	294158	Proteobacteria	Gammaproteobacteria	5.6186	50.5505	chromosome:NZ_CP017669.1/CP017669.1; plasmid pO157:NZ_CP017670.1/CP017670.1	-	2	6011	5586	11/3/16	2/25/17	Complete Genome	USDA/ARS/Eastern Regional Research Center	SAMN04040761	GCA_001865295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/295/GCA_001865295.1_ASM186529v1	-	PA20
Mycobacterium ulcerans	1809	PRJNA316376	316376	Terrabacteria group	Actinobacteria	5.39922	65.6	-	MDUB01	503	4935	3853	11/7/16	4/13/17	Scaffold	Alliance de Recherche sur les Maladies Infectieuses   Nantes-Angers (ARMINA)	SAMN04579668	GCA_001870585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/585/GCA_001870585.1_ASM187058v1	-	S4018
Leptospira borgpetersenii serovar Hardjo	328971	PRJNA296679	296679	Spirochaetes	Spirochaetia	3.94707	40.4919	chromosome 1:NZ_CP015048.1/CP015048.1; chromosome 2:NZ_CP015049.1/CP015049.1	-	2	3841	3206	4/11/16	4/5/17	Chromosome	INDICASAT-AIP	SAMN04102097	GCA_001618445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/445/GCA_001618445.1_ASM161844v1	26770734	BK-30
Escherichia coli	562	PRJNA316786	316786	Proteobacteria	Gammaproteobacteria	5.2158	50.5447	chromosome:NZ_CP018962.1/CP018962.1; plasmid pEC422_1:NZ_CP018961.1/CP018961.1; plasmid pEC422_2:NZ_CP018960.1/CP018960.1; plasmid pEC422_4:NZ_CP018958.1/CP018958.1; plasmid pEC422_KPC:NZ_CP018959.1/CP018959.1	-	5	5436	4978	3/3/17	3/6/17	Complete Genome	University of Oxford	SAMN05511153	GCA_002012185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/185/GCA_002012185.1_ASM201218v1	-	Ecol_422
Escherichia coli O104:H4 str. 2009EL-2050	1134782	PRJNA81097	81097	Proteobacteria	Gammaproteobacteria	5.43817	50.5424	chromosome:NC_018650.1/CP003297.1; plasmid p09EL50:NC_018651.1/CP003298.1; plasmid pAA-09EL50:NC_018654.1/CP003299.1; plasmid pG-09EL50:NC_018652.1/CP003300.1	-	4	5769	5349	9/25/12	2/22/17	Complete Genome	Los Alamos National Laboratory	SAMN01831189	GCA_000299255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/255/GCA_000299255.1_ASM29925v1	23133618	2009EL-2050
Escherichia coli O104:H4	1038927	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.44218	50.5423	chromosome:NZ_CP022086.1/CP022086.1; plasmid unnamed1:NZ_CP022085.1/CP022085.1; plasmid unnamed2:NZ_CP022087.1/CP022087.1	-	3	5793	5190	6/27/17	6/29/17	Complete Genome	US Food and Drug Administration 	SAMN06173361	GCA_002209105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/105/GCA_002209105.1_ASM220910v1	-	FDAARGOS_348
Escherichia coli	562	PRJNA299539	299539	Proteobacteria	Gammaproteobacteria	5.10085	50.5419	chromosome:NZ_CP013190.1/CP013190.1; plasmid pFORC31.1:NZ_CP013191.1/CP013191.1; plasmid pFORC31.2:NZ_CP013192.1/CP013192.1; plasmid pFORC31.3:NZ_CP013193.1/CP013193.1; plasmid pFORC31.4:NZ_CP013194.1/CP013194.1	-	5	5420	4850	10/3/16	2/25/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN04209666	GCA_001750845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/845/GCA_001750845.1_ASM175084v1	-	FORC_031
Escherichia coli O139:H28 str. E24377A	331111	PRJNA13960	13960	Proteobacteria	Gammaproteobacteria	5.24929	50.5414	chromosome:NC_009801.1/CP000800.1; plasmid pETEC_35:NC_009787.1/CP000796.1; plasmid pETEC_5:NC_009791.1/CP000801.1; plasmid pETEC_6:NC_009789.1/CP000798.1; plasmid pETEC_73:NC_009788.1/CP000797.1; plasmid pETEC_74:NC_009790.1/CP000799.1; plasmid pETEC_80:NC_009786.1/CP000795.1	-	7	5530	5092	9/11/07	2/22/17	Complete Genome	TIGR	SAMN02604038	GCA_000017745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/745/GCA_000017745.1_ASM1774v1	-	E24377A
Rhodopseudomonas palustris JSC-3b	1421013	PRJNA227388	227388	Proteobacteria	Alphaproteobacteria	4.06847	64.2	-	AYSU01	8	3726	3618	12/5/13	4/2/17	Scaffold	Hunan Plant Protection Institute	SAMN02401939	GCA_000504425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/425/GCA_000504425.1_Rhodopseudomonas_palustris_JSC-3b	24459280	JSC-3b
Escherichia coli	562	PRJNA329167	329167	Proteobacteria	Gammaproteobacteria	5.32975	50.5312	chromosome:NZ_CP016497.1/CP016497.1; plasmid unnamed1:NZ_CP016498.1/CP016498.1	-	2	5545	5159	7/25/16	2/25/17	Complete Genome	"Chungnam National University, College of medicine"	SAMN05392487	GCA_001693315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/315/GCA_001693315.1_ASM169331v1	-	UPEC 26-1
Shigella boydii 965-58	766138	PRJNA49055	49055	Proteobacteria	Gammaproteobacteria	5.1846	50.6	-	AKNA01	96	5735	4586	6/14/12	8/8/17	Contig	Institute for Genome Sciences	SAMN00016948	GCA_000268145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/145/GCA_000268145.1_ASM26814v1	-	965-58
Escherichia coli	562	PRJNA385892	385892	Proteobacteria	Gammaproteobacteria	5.22193	50.531	chromosome:NZ_CP021288.1/CP021288.1; plasmid pPA45B:NZ_CP021289.1/CP021289.1	-	2	5450	5065	9/5/17	9/7/17	Complete Genome	University of Queensland	SAMN06920354	GCA_002285755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/755/GCA_002285755.1_ASM228575v1	-	PA45B
Escherichia coli	562	PRJNA402083	402083	Proteobacteria	Gammaproteobacteria	5.36125	50.5299	chromosome:NZ_CP023364.1/CP023364.1; plasmid 134q:NZ_CP023363.1/CP023363.1; plasmid p92:NZ_CP023365.1/CP023365.1	-	3	5479	5086	9/18/17	9/20/17	Complete Genome	The Roslin Institute	SAMN07618126	GCA_002310595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/595/GCA_002310595.1_ASM231059v1	-	144
Candidatus Pelagibacter ubique HTCC9022	1265756	PRJNA182740	182740	Proteobacteria	Alphaproteobacteria	1.36096	29.6	-	AWZW01	10	1423	1374	9/30/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02440781	GCA_000472565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/565/GCA_000472565.1_ASM47256v1	-	HTCC9022
Nitrosococcus oceani	1229	PRJNA253938	253938	Proteobacteria	Gammaproteobacteria	3.5451	49.8	-	JPFN01	630	3213	2962	8/15/14	4/9/17	Contig	"University of North Carolina, Charlotte"	SAMN02898118	GCA_000740735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/735/GCA_000740735.1_ASM74073v1	-	AFC132
Escherichia coli	562	PRJNA386069	386069	Proteobacteria	Gammaproteobacteria	5.62852	50.5236	chromosome:NZ_CP021202.1/CP021202.1; plasmid p1002-1:NZ_CP021203.1/CP021203.1; plasmid p1002-4:NZ_CP021204.1/CP021204.1; plasmid p1002-MCR1:NZ_CP021205.1/CP021205.1; plasmid p1002-NDM1:NZ_CP021206.1/CP021206.1	-	5	5949	5451	5/16/17	5/24/17	Complete Genome	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN06924979	GCA_002142675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/675/GCA_002142675.1_ASM214267v1	27506685	Z1002
Escherichia coli	562	PRJNA241122	241122	Proteobacteria	Gammaproteobacteria	5.51185	50.5202	chromosome:NZ_CP015228.1/CP015228.1; plasmid pCFSAN004180G:NZ_CP012500.1/CP012500.1	-	2	5865	5465	7/1/16	2/25/17	Complete Genome	FDA	SAMN02808333	GCA_001677495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/495/GCA_001677495.1_ASM167749v1	-	09-00049
Corynebacterium jeikeium	38289	PRJNA238244	238244	Terrabacteria group	Actinobacteria	2.35673	61.8	-	JFCI01	44	2073	1938	8/6/14	4/2/17	Contig	University of Washington	SAMN02641052	GCA_000738165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/165/GCA_000738165.1_Cj19409	-	Cj19409
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	5.30613	50.5126	chromosome:NZ_CP010206.1/CP010206.1; plasmid A:NZ_CP010207.1/CP010207.1; plasmid B:NZ_CP010208.1/CP010208.1; plasmid C:NZ_CP010209.1/CP010209.1; plasmid D:NZ_CP010210.1/CP010210.1; plasmid E:NZ_CP010211.1/CP010211.1; plasmid F:NZ_CP010212.1/CP010212.1	-	7	5481	5077	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252445	GCA_001901145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/145/GCA_001901145.1_ASM190114v1	-	M11
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	5.04558	50.5123	chromosome:NZ_CP010191.1/CP010191.1; plasmid A:NZ_CP010192.1/CP010192.1; plasmid B:NZ_CP010193.1/CP010193.1; plasmid C:NZ_CP010194.1/CP010194.1; plasmid D:NZ_CP010195.1/CP010195.1	-	5	5232	4936	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252442	GCA_001901085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/085/GCA_001901085.1_ASM190108v1	-	M8
Escherichia coli	562	PRJNA402083	402083	Proteobacteria	Gammaproteobacteria	5.13375	50.5101	chromosome:NZ_CP023388.1/CP023388.1; plasmid p74:NZ_CP023389.1/CP023389.1	-	2	5280	4901	9/18/17	9/20/17	Complete Genome	The Roslin Institute	SAMN07618120	GCA_002310635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/635/GCA_002310635.1_ASM231063v1	-	1105
Escherichia coli	562	PRJNA389338	389338	Proteobacteria	Gammaproteobacteria	5.4689	50.5099	chromosome:NZ_CP021844.1/CP021844.1; plasmid pEC1515-1:NZ_CP021845.1/CP021845.1; plasmid pEC1515-2:NZ_CP021846.1/CP021846.1; plasmid pEC1515-3:NZ_CP021847.1/CP021847.1	-	4	5614	5199	6/15/17	6/19/17	Complete Genome	National Yang Ming University	SAMN07192704	GCA_002196495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/495/GCA_002196495.1_ASM219649v1	-	EC1515
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	5.16014	50.5051	chromosome:NZ_CP010219.1/CP010219.1; plasmid A:NZ_CP010220.1/CP010220.1	-	2	5345	4994	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252447	GCA_001901185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/185/GCA_001901185.1_ASM190118v1	-	M18
Escherichia coli	562	PRJNA402083	402083	Proteobacteria	Gammaproteobacteria	5.30974	50.5025	chromosome:NZ_CP023366.1/CP023366.1; plasmid p111:NZ_CP023367.1/CP023367.1; plasmid p48:NZ_CP023368.1/CP023368.1; plasmid p66:NZ_CP023369.1/CP023369.1; plasmid p96:NZ_CP023370.1/CP023370.1	-	5	5517	5142	9/18/17	9/20/17	Complete Genome	The Roslin Institute	SAMN07618125	GCA_002310695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/695/GCA_002310695.1_ASM231069v1	-	1428
Bdellovibrio bacteriovorus	959	PRJNA383405	383405	Proteobacteria	Oligoflexia	3.76954	50.5	chromosome:NZ_CP020946.1/CP020946.1	-	1	3620	3534	6/26/17	6/28/17	Complete Genome	"CENTRO DE BIOTECNOLOGIA GENOMICA, INSTITUTO POLITECNICO NACIONAL"	SAMN06764627	GCA_002208115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/115/GCA_002208115.1_ASM220811v1	-	SSB218315
Cellvibrio sp. PSBB006	1987723	PRJNA369694	369694	Proteobacteria	Gammaproteobacteria	5.25707	50.5	chromosome:NZ_CP021382.1/CP021382.1	-	1	4389	4288	5/31/17	6/2/17	Complete Genome	University of Minnesota	SAMN06842957	GCA_002162135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/135/GCA_002162135.1_ASM216213v1	-	PSBB006
Escherichia coli	562	PRJNA376490	376490	Proteobacteria	Gammaproteobacteria	5.44583	50.5	chromosome:NZ_CP019944.1/CP019944.1	-	1	5577	5138	3/21/17	3/23/17	Complete Genome	Leibniz Institute DSMZ	SAMN06434185	GCA_002058765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/058/765/GCA_002058765.1_ASM205876v1	-	DSM 103246
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	4.84302	50.5	chromosome:NZ_CP010116.1/CP010116.1	-	1	4900	4597	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252409	GCA_001900295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/295/GCA_001900295.1_ASM190029v1	-	C1
Ehrlichia ruminantium	779	PRJNA355590	355590	Proteobacteria	Alphaproteobacteria	1.45538	27.5	-	MQUJ01	1	972	867	2/13/17	3/8/17	Scaffold	CIRAD	SAMN06090168	GCA_002019755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/755/GCA_002019755.1_ASM201975v1	-	Senegal virulent
Shewanella putrefaciens JCM 20190 = NBRC 3908	1236543	PRJDB463	173182	Proteobacteria	Gammaproteobacteria	4.33612	44.3	-	BCUO01	84	3951	3696	2/23/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046716	GCA_001591325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/325/GCA_001591325.1_ASM159132v1	-	NBRC 3908
Escherichia coli O157:H7	83334	PRJNA322195	322195	Proteobacteria	Gammaproteobacteria	5.64522	50.5	chromosome:NZ_CP015842.1/CP015842.1	-	1	6080	5621	5/25/16	8/17/17	Complete Genome	University of Florida	SAMN04191553	GCA_001651945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/945/GCA_001651945.1_ASM165194v1	-	FRIK2533
Shigella dysenteriae 225-75	766143	PRJNA49065	49065	Proteobacteria	Gammaproteobacteria	4.81317	51.2	-	AKNG01	111	5483	4246	6/14/12	8/4/17	Contig	Institute for Genome Sciences	SAMN00752563	GCA_000268105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/105/GCA_000268105.1_ASM26810v1	-	225-75
Anaplasma marginale str. Dawn	1412841	PRJNA224564	224564	Proteobacteria	Alphaproteobacteria	1.19676	49.7	chromosome:NC_022760.1/CP006847.1	-	1	1016	783	11/5/13	4/2/17	Chromosome	inmegen	SAMN02603338	GCA_000495535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/535/GCA_000495535.1_ASM49553v1	25364572	Dawn
Escherichia coli O157	1045010	PRJNA321984	321984	Proteobacteria	Gammaproteobacteria	5.83121	50.5	chromosome:NZ_CP015831.1/CP015831.1	-	1	6284	5745	5/24/16	2/25/17	Complete Genome	Public Health England	SAMN05007045	GCA_001650295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/295/GCA_001650295.1_ASM165029v1	-	644-PT8
Pectobacterium parmentieri WPP163	561231	PRJNA31293	31293	Proteobacteria	Gammaproteobacteria	5.06389	50.5	chromosome:NC_013421.1/CP001790.1	-	1	4690	4423	10/20/09	9/3/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598479	GCA_000024645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/645/GCA_000024645.1_ASM2464v1	-	WPP163
Escherichia coli 536	362663	PRJNA16235	16235	Proteobacteria	Gammaproteobacteria	4.93892	50.5	chromosome:NC_008253.1/CP000247.1	-	1	5014	4623	7/13/06	2/22/17	Complete Genome	University of Goettingen	SAMN02604181	GCA_000013305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/305/GCA_000013305.1_ASM1330v1	16879640	536
Escherichia coli CFT073	199310	PRJNA313	313	Proteobacteria	Gammaproteobacteria	5.23143	50.5	chromosome:NC_004431.1/AE014075.1	-	1	5421	4989	12/6/02	2/22/17	Complete Genome	Univ. Wisconsin	SAMN02604094	GCA_000007445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/445/GCA_000007445.1_ASM744v1	12471157	CFT073
Escherichia coli SMS-3-5	439855	PRJNA19469	19469	Proteobacteria	Gammaproteobacteria	5.21538	50.4954	chromosome:NC_010498.1/CP000970.1; plasmid pSMS35_130:NC_010488.1/CP000971.1; plasmid pSMS35_3:NC_010487.1/CP000974.1; plasmid pSMS35_4:NC_010486.1/CP000973.1; plasmid pSMS35_8:NC_010485.1/CP000972.1	-	5	5332	4917	3/20/08	2/22/17	Complete Genome	TIGR	SAMN02604066	GCA_000019645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/645/GCA_000019645.1_ASM1964v1	18708504	SMS-3-5
Escherichia coli	562	PRJNA389338	389338	Proteobacteria	Gammaproteobacteria	5.45769	50.4946	chromosome:NZ_CP021840.1/CP021840.1; plasmid pEC974-1:NZ_CP021841.1/CP021841.1; plasmid pEC974-2:NZ_CP021842.1/CP021842.1; plasmid pEC974-3:NZ_CP021843.1/CP021843.1	-	4	5602	5187	6/15/17	6/19/17	Complete Genome	National Yang Ming University	SAMN07192703	GCA_002196475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/475/GCA_002196475.1_ASM219647v1	-	EC974
Xanthomonas axonopodis pv. khayae	487831	PRJNA298599	298599	Proteobacteria	Gammaproteobacteria	4.97896	64.7	-	LOKN01	354	4538	3986	3/6/17	3/9/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN04145192	GCA_002019155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/155/GCA_002019155.1_ASM201915v1	-	LMG753
Escherichia coli	562	PRJNA355857	355857	Proteobacteria	Gammaproteobacteria	4.9845	50.4935	chromosome:NZ_CP019558.1/CP019558.1; plasmid unnamed:NZ_CP019559.1/CP019559.1	-	2	5112	4821	6/2/17	6/5/17	Complete Genome	University of Guelph	SAMN06165999	GCA_002163955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/955/GCA_002163955.1_ASM216395v1	-	207
Escherichia coli O157	1045010	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.6865	50.4905	chromosome:NZ_CP022050.1/CP022050.1; plasmid unnamed1:NZ_CP022051.1/CP022051.1; plasmid unnamed2:NZ_CP022052.1/CP022052.1	-	3	6112	5586	6/27/17	6/29/17	Complete Genome	US Food and Drug Administration 	SAMN06173306	GCA_002208865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/865/GCA_002208865.1_ASM220886v1	-	FDAARGOS_293
Escherichia coli	562	PRJNA279612	279612	Proteobacteria	Gammaproteobacteria	5.33188	50.4894	chromosome:NZ_CP014667.1/CP014667.1; plasmid pECO-bc6:NZ_CP014668.1/CP014668.1; plasmid pKpQIL-571:NZ_CP014669.1/CP014669.1	-	3	5505	5149	6/22/16	2/25/17	Complete Genome	NHGRI	SAMN03455931	GCA_001675145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/145/GCA_001675145.1_ASM167514v1	-	ECONIH2
Escherichia coli	562	PRJNA350704	350704	Proteobacteria	Gammaproteobacteria	5.02283	50.4827	chromosome:NZ_CP017844.1/CP017844.1; plasmid pEcoFMU07332d:NZ_CP017848.1/CP017848.1; plasmid pEcoFMU073332a:NZ_CP017845.1/CP017845.1; plasmid pEcoFMU073332b:NZ_CP017846.1/CP017846.1; plasmid pEcoFMU073332c:NZ_CP017847.1/CP017847.1	-	5	5349	4805	12/2/16	2/25/17	Complete Genome	Centro de Ciencias Genomicas	SAMN05945146	GCA_001888075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/075/GCA_001888075.1_ASM188807v1	-	FMU073332
Escherichia coli	562	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	5.28895	50.4821	chromosome:NZ_CP011416.1/CP011416.1; plasmid pCFSAN029787_01:NZ_CP011417.1/CP011417.1; plasmid pCFSAN029787_02:NZ_CP011418.1/CP011418.1	-	3	5601	5114	5/15/15	2/23/17	Complete Genome	FDA/CFSAN	SAMN03612246	GCA_001007915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/915/GCA_001007915.1_ASM100791v1	26251502	CFSAN029787
Escherichia coli O55:H7 str. CB9615	701177	PRJNA42729	42729	Proteobacteria	Gammaproteobacteria	5.45235	50.4806	chromosome:NC_013941.1/CP001846.1; plasmid pO55:NC_013942.1/CP001847.1	-	2	5714	5310	3/8/10	2/22/17	Complete Genome	Nankai University	SAMN02603636	GCA_000025165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/165/GCA_000025165.1_ASM2516v1	20090843	CB9615
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	5.63396	50.4797	chromosome:NZ_CP010122.1/CP010122.1; plasmid A:NZ_CP010123.1/CP010123.1; plasmid B:NZ_CP010124.1/CP010124.1	-	3	5922	5485	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252413	GCA_001900535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/535/GCA_001900535.1_ASM190053v1	-	C5
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.71165	50.4727	chromosome:NZ_CP023142.1/CP023142.1; plasmid pEGY1-MCR-1:NZ_CP023143.1/CP023143.1; plasmid pEGY2:NZ_CP023144.1/CP023144.1; plasmid pEGY3:NZ_CP023145.1/CP023145.1	-	4	6021	5599	8/31/17	9/7/17	Complete Genome	FDA/CFSAN	SAMN06928086	GCA_002278115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/115/GCA_002278115.2_ASM227811v2	-	CFSAN061770
Escherichia coli	562	PRJNA301656	301656	Proteobacteria	Gammaproteobacteria	5.59978	50.4726	chromosome:NZ_CP015834.1/CP015834.1; plasmid pMS6198A:NZ_CP015835.1/CP015835.1; plasmid pMS6198B:NZ_CP015836.1/CP015836.1; plasmid pMS6198C:NZ_CP015837.1/CP015837.1; plasmid pMS6198D:NZ_CP015838.1/CP015838.1	-	5	5832	5425	9/8/16	2/25/17	Complete Genome	University of Queensland	SAMN04939501	GCA_001721525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/525/GCA_001721525.1_ASM172152v1	-	MS6198
Escherichia coli str. Sanji	1441627	PRJNA232611	232611	Proteobacteria	Gammaproteobacteria	5.42859	50.4704	chromosome:NZ_CP011061.1/CP011061.1; plasmid pSJ_2:NZ_CP011067.1/CP011067.1; plasmid pSJ_255:NZ_CP011062.1/CP011062.1; plasmid pSJ_3:NZ_CP011066.1/CP011066.1; plasmid pSJ_82:NZ_CP011065.1/CP011065.1; plasmid pSJ_94:NZ_CP011064.1/CP011064.1; plasmid pSJ_98:NZ_CP011063.1/CP011063.1	-	7	5690	5254	4/5/16	2/25/17	Complete Genome	Fujian Agriculture and Forestry University	SAMN02580208	GCA_001610755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/755/GCA_001610755.1_ASM161075v1	-	Sanji
Agrobacterium tumefaciens LBA4213 (Ach5)	1435057	PRJNA231114	231114	Proteobacteria	Alphaproteobacteria	5.63069	58.5172	chromosome circular:NZ_CP007225.1/CP007225.1; chromosome linear:NZ_CP007226.1/CP007226.1; plasmid pAt:NZ_CP007227.1/CP007227.1; plasmid pTi:NZ_CP007228.1/CP007228.1	-	4	5368	5138	2/24/14	4/18/17	Chromosome	"Institute of Biology, Leiden University"	SAMN03081534	GCA_000576515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/515/GCA_000576515.1_ASM57651v1	24675863	LBA4213 (Ach5)
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	5.3285	50.4668	chromosome:NZ_CP010213.1/CP010213.1; plasmid A:NZ_CP010214.1/CP010214.1; plasmid B:NZ_CP010215.1/CP010215.1; plasmid C:NZ_CP010216.1/CP010216.1; plasmid D:NZ_CP010217.1/CP010217.1; plasmid E:NZ_CP010218.1/CP010218.1	-	6	5486	5077	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252446	GCA_001901165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/165/GCA_001901165.1_ASM190116v1	-	M15
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	5.32715	50.4664	chromosome:NZ_CP010221.1/CP010221.1; plasmid A:NZ_CP010222.1/CP010222.1; plasmid B:NZ_CP010223.1/CP010223.1; plasmid C:NZ_CP010224.1/CP010224.1; plasmid D:NZ_CP010225.1/CP010225.1	-	5	5483	5078	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252448	GCA_001901215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/215/GCA_001901215.1_ASM190121v1	-	M19
Escherichia coli	562	PRJNA316786	316786	Proteobacteria	Gammaproteobacteria	5.38306	50.4656	chromosome:NZ_CP019020.1/CP019020.1; plasmid pEC244_1:NZ_CP019019.1/CP019019.1; plasmid pEC244_2:NZ_CP019018.1/CP019018.1; plasmid pEC244_4:NZ_CP019016.1/CP019016.1; plasmid pEC244_KPC:NZ_CP019017.1/CP019017.1	-	5	5593	5226	3/3/17	3/6/17	Complete Genome	University of Oxford	SAMN05511157	GCA_002012305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/305/GCA_002012305.1_ASM201230v1	-	Ecol_244
Escherichia coli	562	PRJNA336330	336330	Proteobacteria	Gammaproteobacteria	5.61173	50.4593	chromosome:NZ_CP018252.1/CP018252.1; plasmid pO157:NZ_CP018253.1/CP018253.1	-	2	6009	5568	12/7/16	2/26/17	Complete Genome	United State Department of Agriculture	SAMN05544760	GCA_001890285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/285/GCA_001890285.1_ASM189028v1	-	9000
Escherichia coli O157:H7	83334	PRJNA322195	322195	Proteobacteria	Gammaproteobacteria	5.74083	50.4584	chromosome:NZ_CP015846.1/CP015846.1; plasmid p0157:NZ_CP015847.2/CP015847.2	-	2	6200	5728	5/25/16	8/17/17	Complete Genome	University of Florida	SAMN04191551	GCA_001651925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/925/GCA_001651925.2_ASM165192v2	-	FRIK2069
Escherichia coli	562	PRJNA336330	336330	Proteobacteria	Gammaproteobacteria	5.60887	50.4575	chromosome:NZ_CP018245.1/CP018245.1; plasmid pO157:NZ_CP018246.1/CP018246.1	-	2	5996	5526	12/7/16	2/25/17	Complete Genome	United State Department of Agriculture	SAMN05544767	GCA_001890245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/245/GCA_001890245.1_ASM189024v1	-	472
Escherichia coli	562	PRJNA330605	330605	Proteobacteria	Gammaproteobacteria	5.70317	50.457	chromosome:NZ_CP016755.1/CP016755.1; plasmid pFORC44_1:NZ_CP018625.1/CP018625.1; plasmid pFORC44_2:NZ_CP018626.1/CP018626.1	-	3	6158	5564	7/17/17	7/19/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN05417814	GCA_002220265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/265/GCA_002220265.1_ASM222026v1	-	FORC_044
Escherichia coli O157:H7	83334	PRJNA322195	322195	Proteobacteria	Gammaproteobacteria	5.57459	50.457	chromosome complete:NZ_CP014314.1/CP014314.1; plasmid p0157:NZ_CP015816.1/CP015816.1	-	2	5952	5515	2/11/16	2/25/17	Complete Genome	University of Florida	SAMN04191546	GCA_001558995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/995/GCA_001558995.2_ASM155899v2	27056233	JEONG-1266
Escherichia coli	562	PRJNA336330	336330	Proteobacteria	Gammaproteobacteria	5.52054	50.4568	chromosome:NZ_CP018250.1/CP018250.1; plasmid pO157:NZ_CP018251.1/CP018251.1	-	2	5868	5443	12/7/16	2/25/17	Complete Genome	United State Department of Agriculture	SAMN05544761	GCA_001890345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/345/GCA_001890345.1_ASM189034v1	-	10671
Escherichia coli O157:H7 str. TW14359	544404	PRJNA30045	30045	Proteobacteria	Gammaproteobacteria	5.62274	50.4563	chromosome:NC_013008.1/CP001368.1; plasmid pO157:NC_013010.1/CP001369.1	-	2	6021	5590	7/23/09	2/22/17	Complete Genome	University of Washington	SAMN02604255	GCA_000022225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/225/GCA_000022225.1_ASM2222v1	19564389	TW14359
Escherichia coli	562	PRJNA336330	336330	Proteobacteria	Gammaproteobacteria	5.56836	50.456	chromosome:NZ_CP018239.1/CP018239.1; plasmid pO157:NZ_CP018240.1/CP018240.1	-	2	5926	5488	12/7/16	2/25/17	Complete Genome	United State Department of Agriculture	SAMN05544766	GCA_001890225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/225/GCA_001890225.1_ASM189022v1	-	272
Escherichia coli O157:H7 str. SS52	1330457	PRJNA201344	201344	Proteobacteria	Gammaproteobacteria	5.58343	50.4559	chromosome:NZ_CP010304.1/CP010304.1; plasmid p0157:NZ_CP010305.1/CP010305.1	-	2	5968	5541	12/18/14	2/23/17	Complete Genome	Penn State	SAMN03265100	GCA_000803705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/705/GCA_000803705.1_ASM80370v1	-	SS52
Escherichia coli	562	PRJNA336330	336330	Proteobacteria	Gammaproteobacteria	5.56738	50.4551	chromosome:NZ_CP018241.1/CP018241.1; plasmid pO157:NZ_CP018242.1/CP018242.1	-	2	5896	5455	12/7/16	2/25/17	Complete Genome	United State Department of Agriculture	SAMN05544768	GCA_001890325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/325/GCA_001890325.1_ASM189032v1	-	319
Escherichia coli	562	PRJNA336330	336330	Proteobacteria	Gammaproteobacteria	5.50434	50.4546	chromosome:NZ_CP018243.1/CP018243.1; plasmid pO157:NZ_CP018244.1/CP018244.1	-	2	5817	5407	12/7/16	2/25/17	Complete Genome	United State Department of Agriculture	SAMN05544765	GCA_001890265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/265/GCA_001890265.1_ASM189026v1	-	350
Escherichia coli O157:H7	83334	PRJNA291880	291880	Proteobacteria	Gammaproteobacteria	5.50901	50.4546	chromosome:NZ_CP017434.1/CP017434.1; plasmid pO157:NZ_CP017435.1/CP017435.1	-	2	5834	5364	10/6/16	2/25/17	Complete Genome	United State Department of Agriculture	SAMN04447635	GCA_001753445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/445/GCA_001753445.1_ASM175344v1	-	1130
Tropheryma whipplei str. Art1	1293895	PRJEB1441	189644	Terrabacteria group	Actinobacteria	0.927575	46.3	-	CAUF02	1	869	782	3/5/13	4/2/17	Scaffold	URMITE	SAMEA2272702	GCA_000346105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/105/GCA_000346105.2_ASM34610v2	-	Art1
Escherichia coli O157:H7	83334	PRJNA291880	291880	Proteobacteria	Gammaproteobacteria	5.50077	50.4546	chromosome:NZ_CP017436.1/CP017436.1; plasmid pO157:NZ_CP017437.1/CP017437.1	-	2	5824	5360	10/6/16	2/25/17	Complete Genome	United State Department of Agriculture	SAMN04447629	GCA_001753465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/465/GCA_001753465.1_ASM175346v1	-	2149
Escherichia coli O157:H7	83334	PRJNA291880	291880	Proteobacteria	Gammaproteobacteria	5.50923	50.4546	chromosome:NZ_CP017438.1/CP017438.1; plasmid pO157:NZ_CP017439.1/CP017439.1	-	2	5831	5365	10/6/16	2/25/17	Complete Genome	United State Department of Agriculture	SAMN04447630	GCA_001753505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/505/GCA_001753505.1_ASM175350v1	-	2159
Escherichia coli O157:H7	83334	PRJNA291880	291880	Proteobacteria	Gammaproteobacteria	5.50318	50.4546	chromosome:NZ_CP017446.1/CP017446.1; plasmid pO157:NZ_CP017447.1/CP017447.1	-	2	5823	5354	10/6/16	2/25/17	Complete Genome	United State Department of Agriculture	SAMN04447632	GCA_001753525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/525/GCA_001753525.1_ASM175352v1	-	9234
Escherichia coli O157:H7	83334	PRJNA291880	291880	Proteobacteria	Gammaproteobacteria	5.49714	50.4545	chromosome:NZ_CP017442.1/CP017442.1; plasmid pO157:NZ_CP017443.1/CP017443.1	-	2	5822	5363	10/6/16	2/25/17	Complete Genome	United State Department of Agriculture	SAMN04447636	GCA_001753565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/565/GCA_001753565.1_ASM175356v1	-	4276
Escherichia coli	562	PRJNA336330	336330	Proteobacteria	Gammaproteobacteria	5.60443	50.4543	chromosome:NZ_CP018237.1/CP018237.1; plasmid pO157:NZ_CP018238.1/CP018238.1	-	2	5985	5499	12/7/16	2/25/17	Complete Genome	United State Department of Agriculture	SAMN05544764	GCA_001890205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/205/GCA_001890205.1_ASM189020v1	-	155
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	5.30435	50.4537	chromosome:NZ_CP010196.1/CP010196.1; plasmid A:NZ_CP010197.1/CP010197.1; plasmid B:NZ_CP010198.1/CP010198.1; plasmid C:NZ_CP010199.1/CP010199.1	-	4	5452	5049	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252443	GCA_001901105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/105/GCA_001901105.1_ASM190110v1	-	M9
Escherichia coli	562	PRJNA336330	336330	Proteobacteria	Gammaproteobacteria	5.46206	50.4532	chromosome:NZ_CP018247.1/CP018247.1; plasmid pO157:NZ_CP018248.1/CP018248.1	-	2	5798	5363	12/7/16	2/25/17	Complete Genome	United State Department of Agriculture	SAMN05544762	GCA_001890305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/305/GCA_001890305.1_ASM189030v1	-	7784
Escherichia coli O157:H7 str. EDL933	155864	PRJNA253471	253471	Proteobacteria	Gammaproteobacteria	5.6394	50.4527	chromosome:NZ_CP008957.1/CP008957.1; plasmid unnamed:NZ_CP008958.1/CP008958.1	-	2	6035	5593	7/24/14	2/23/17	Complete Genome	University of California San Diego	SAMN02905113	GCA_000732965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/965/GCA_000732965.1_ASM73296v1	25125650	EDL933
Escherichia coli	562	PRJNA341860	341860	Proteobacteria	Gammaproteobacteria	5.5598	50.4517	chromosome:NZ_CP017249.1/CP017249.1; plasmid pO157:NZ_CP017250.1/CP017250.1	-	2	5921	5457	10/21/16	2/25/17	Complete Genome	USDA/ARS/National Animal Disease Center	SAMN05729957	GCA_001806265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/265/GCA_001806265.1_ASM180626v1	-	NADC 5570/86-24/6565
Escherichia coli	562	PRJNA341860	341860	Proteobacteria	Gammaproteobacteria	5.55946	50.4516	chromosome:NZ_CP017251.1/CP017251.1; plasmid pO157:NZ_CP017252.1/CP017252.1	-	2	5914	5448	10/21/16	2/25/17	Complete Genome	USDA/ARS/National Animal Disease Center	SAMN05729956	GCA_001806285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/285/GCA_001806285.1_ASM180628v1	-	NADC 5570/86-24/6564
Escherichia coli O157:H7	83334	PRJNA291880	291880	Proteobacteria	Gammaproteobacteria	5.53026	50.4514	chromosome:NZ_CP017444.1/CP017444.1; plasmid pO157:NZ_CP017445.1/CP017445.1	-	2	5885	5463	10/6/16	2/25/17	Complete Genome	United State Department of Agriculture	SAMN04447624	GCA_001753485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/485/GCA_001753485.1_ASM175348v1	-	8368
Escherichia coli O157:H7	83334	PRJNA291880	291880	Proteobacteria	Gammaproteobacteria	5.53132	50.4514	chromosome:NZ_CP017440.1/CP017440.1; plasmid pO157:NZ_CP017441.1/CP017441.1	-	2	5889	5471	10/6/16	2/25/17	Complete Genome	United State Department of Agriculture	SAMN04447623	GCA_001753545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/545/GCA_001753545.1_ASM175354v1	-	3384
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	5.31016	50.4502	chromosome:NZ_CP010186.1/CP010186.1; plasmid A:NZ_CP010187.1/CP010187.1; plasmid B:NZ_CP010188.1/CP010188.1; plasmid C:NZ_CP010189.1/CP010189.1; plasmid D:NZ_CP010190.1/CP010190.1	-	5	5462	5047	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252441	GCA_001901065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/065/GCA_001901065.1_ASM190106v1	-	M6
Escherichia coli	562	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.4981	50.4498	chromosome:NZ_CP022689.1/CP022689.1; plasmid p0157:NZ_CP022688.1/CP022688.1	-	2	5851	5402	8/14/17	8/16/17	Complete Genome	CDC	SAMN03256350	GCA_002249955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/955/GCA_002249955.1_ASM224995v1	-	CDC#03-98
Escherichia coli O157:H7 str. Sakai	386585	PRJNA226	226	Proteobacteria	Gammaproteobacteria	5.59448	50.4477	chromosome:NC_002695.1/BA000007.2; plasmid pO157:NC_002128.1/AB011549.2; plasmid pOSAK1:NC_002127.1/AB011548.2	-	3	5446	5288	3/7/01	7/27/17	Complete Genome	GIRC	SAMN01911278	GCA_000008865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/865/GCA_000008865.1_ASM886v1	"107,346,051,110,800,000,000,000"	Sakai substr. RIMD 0509952
Escherichia coli O157:H7	83334	PRJNA296759	296759	Proteobacteria	Gammaproteobacteria	5.42811	50.4461	chromosome:NZ_CP012802.1/CP012802.1; plasmid pO157-WS4202:NZ_CP012803.1/CP012803.1; plasmid pOSAK1-WS4202:NZ_CP012804.1/CP012804.1	-	3	5760	5354	10/6/15	2/25/17	Complete Genome	Technische Universitaet Muenchen	SAMN04103124	GCA_001307215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/215/GCA_001307215.1_ASM130721v1	27056239	WS4202
Escherichia coli	562	PRJNA316786	316786	Proteobacteria	Gammaproteobacteria	5.59755	50.4424	chromosome:NZ_CP019029.1/CP019029.1; plasmid pEC881_1:NZ_CP019028.1/CP019028.1; plasmid pEC881_2:NZ_CP019027.1/CP019027.1; plasmid pEC881_4:NZ_CP019025.1/CP019025.1; plasmid pEC881_5:NZ_CP019024.1/CP019024.1; plasmid pEC881_6:NZ_CP019023.1/CP019023.1; plasmid pEC881_7:NZ_CP019022.1/CP019022.1; plasmid pEC881_8:NZ_CP019021.1/CP019021.1; plasmid pEC881_KPC:NZ_CP019026.1/CP019026.1	-	9	5837	5421	3/3/17	3/6/17	Complete Genome	University of Oxford	SAMN05511150	GCA_002012225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/225/GCA_002012225.1_ASM201222v1	-	Ecol_881
Escherichia coli	562	PRJNA344951	344951	Proteobacteria	Gammaproteobacteria	5.77366	50.4392	chromosome:NZ_CP017631.1/CP017631.1; plasmid pSLK172-1:NZ_CP017632.1/CP017632.1; plasmid pSLK172-2:NZ_CP017633.1/CP017633.1	-	3	6155	5609	1/5/17	2/26/17	Complete Genome	China National Center For Food Safety and Risk Assessment	SAMN05853574	GCA_001936315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/315/GCA_001936315.1_ASM193631v1	-	SLK172
Escherichia coli	562	PRJNA242851	242851	Proteobacteria	Gammaproteobacteria	5.55964	50.4351	chromosome:NZ_CP009859.1/CP009859.1; plasmid pECO-824:NZ_CP009860.1/CP009860.1; plasmid pECO-b75:NZ_CP009861.1/CP009861.1; plasmid pKPC-629:NZ_CP009862.1/CP009862.1	-	4	5794	5364	11/17/14	2/23/17	Complete Genome	NIH	SAMN02709589	GCA_000784925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/925/GCA_000784925.1_ASM78492v1	25232178	ECONIH1
Escherichia coli O55:H7 str. RM12579	1048689	PRJNA68245	68245	Proteobacteria	Gammaproteobacteria	5.44831	50.4328	chromosome:NC_017656.1/CP003109.1; plasmid p12579_1:NC_017653.1/CP003110.1; plasmid p12579_2:NC_017657.1/CP003111.1; plasmid p12579_3:NC_017654.1/CP003112.1; plasmid p12579_4:NC_017658.1/CP003113.1; plasmid p12579_5:NC_017655.1/CP003114.1	-	6	5701	5278	2/1/12	2/22/17	Complete Genome	USDA/ARS	SAMN02604278	GCA_000245515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/515/GCA_000245515.1_ASM24551v1	22328665	RM12579
Escherichia coli O157	1045010	PRJNA321984	321984	Proteobacteria	Gammaproteobacteria	5.75019	50.4326	chromosome:NZ_CP015832.1/CP015832.1; plasmid unnamed:NZ_CP015833.1/CP015833.1	-	2	6133	5654	5/24/16	2/25/17	Complete Genome	Public Health England	SAMN05007044	GCA_001650275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/275/GCA_001650275.1_ASM165027v1	-	180-PT54
Escherichia coli O111:H- str. 11128	585396	PRJDA32513	32513	Proteobacteria	Gammaproteobacteria	5.76608	50.4216	chromosome:NC_013364.1/AP010960.1; plasmid pO111_1:NC_013365.1/AP010961.1; plasmid pO111_2:NC_013370.1/AP010962.1; plasmid pO111_3:NC_013366.1/AP010963.1; plasmid pO111_4:NC_013367.1/AP010964.1; plasmid pO111_5:NC_013368.1/AP010965.1	-	6	6211	5672	9/10/09	2/22/17	Complete Genome	"University of Tokyo, Graduate School of Frontier Sciences"	SAMD00060957	GCA_000010765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/765/GCA_000010765.1_ASM1076v1	19815525	11128
Escherichia coli	562	PRJNA241122	241122	Proteobacteria	Gammaproteobacteria	5.7123	50.4203	chromosome:NZ_CP015229.1/CP015229.1; plasmid pCFSAN004178P_02:NZ_CP012498.1/CP012498.1	-	2	5982	5524	7/1/16	2/25/17	Complete Genome	FDA	SAMN02808332	GCA_001677475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/475/GCA_001677475.1_ASM167747v1	-	06-00048
Escherichia coli	562	PRJNA241122	241122	Proteobacteria	Gammaproteobacteria	5.37647	50.4098	chromosome:NZ_CP014583.1/CP014583.1; plasmid pCFSAN004176G_02:NZ_CP012493.1/CP012493.1; plasmid pCFSAN004176P_01:NZ_CP012492.1/CP012492.1; plasmid pCFSAN004176P_03:NZ_CP012491.1/CP012491.1	-	4	5738	5147	9/7/16	2/25/17	Complete Genome	FDA	SAMN02688212	GCA_001721225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/225/GCA_001721225.1_ASM172122v1	-	CFSAN004176
Escherichia coli	562	PRJNA241122	241122	Proteobacteria	Gammaproteobacteria	5.37457	50.4077	chromosome:NZ_CP014670.1/CP014670.1; plasmid pCFSAN004177G_03:NZ_CP012494.1/CP012494.1; plasmid pCFSAN004177P_01:NZ_CP012496.1/CP012496.1; plasmid pCFSAN004177P_02:NZ_CP012495.1/CP012495.1	-	4	5737	4966	9/7/16	8/8/17	Complete Genome	FDA	SAMN02688214	GCA_001721205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/205/GCA_001721205.1_ASM172120v1	-	CFSAN004177
Escherichia coli	562	PRJNA292046	292046	Proteobacteria	Gammaproteobacteria	4.85974	50.4	chromosome:NZ_CP012379.1/CP012379.1	-	1	4945	4642	7/31/17	8/3/17	Complete Genome	Nankai University	SAMN03963238	GCA_002237305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/305/GCA_002237305.1_ASM223730v1	-	PAR
Tropheryma whipplei str. Dig15	1293896	PRJEB1442	189635	Terrabacteria group	Actinobacteria	0.927582	46.3	-	CAAG02	1	868	786	3/26/13	4/2/17	Scaffold	URMITE	SAMEA2272116	GCA_000359145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/145/GCA_000359145.2_G158	-	Dig15
Novibacillus thermophilus	1471761	PRJNA371390	371390	Terrabacteria group	Firmicutes	3.62922	50.4	chromosome:NZ_CP019699.1/CP019699.1	-	1	3532	3254	2/21/17	2/23/17	Complete Genome	Guangdong Institute of Eco-Environmental Science & Technology	SAMN06310877	GCA_002005165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/165/GCA_002005165.1_ASM200516v1	25951858	SG-1
Christensenella massiliensis	1805714	PRJEB13909	321139	Terrabacteria group	Firmicutes	2.56019	50.4	chromosome contig00001:NZ_LT700187.1/LT700187.1	-	1	2515	2428	1/5/17	3/18/17	Complete Genome	URMITE	SAMEA4475147	GCA_900155415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/415/GCA_900155415.1_PRJEB13909b	-	Marseille-P2438
Escherichia coli	562	PRJNA269191	269191	Proteobacteria	Gammaproteobacteria	5.13065	50.4	chromosome:NZ_CP010151.1/CP010151.1	-	1	5249	4904	12/12/16	2/26/17	Complete Genome	Nanjing Agricultural University	SAMN03252426	GCA_001900395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/395/GCA_001900395.1_ASM190039v1	-	D8
Pectobacterium parmentieri	1905730	PRJNA321811	321811	Proteobacteria	Gammaproteobacteria	5.03084	50.4	chromosome:NZ_CP015749.1/CP015749.1	-	1	4701	4454	9/22/16	4/13/17	Complete Genome	Institute for integrative biology of the cell	SAMN02729843	GCA_001742145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/145/GCA_001742145.1_ASM174214v1	25297844	RNS08.42.1A
Escherichia coli	562	PRJNA326753	326753	Proteobacteria	Gammaproteobacteria	5.15464	50.4	chromosome:NZ_CP016358.1/CP016358.1	-	1	5271	4928	7/11/16	2/25/17	Complete Genome	University of Zurich	SAMN05291917	GCA_001683435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/435/GCA_001683435.1_ASM168343v1	-	K-15KW01
Pectobacterium sp. SCC3193	1166016	PRJNA122637	122637	Proteobacteria	Gammaproteobacteria	5.16441	50.4	chromosome:NC_017845.1/CP003415.1	-	1	4821	4449	5/2/12	4/7/17	Complete Genome	University of Helsinki	SAMN02604188	GCA_000260925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/925/GCA_000260925.1_ASM26092v1	23045508	SCC3193
Prevotella denticola F0289	767031	PRJNA49293	49293	FCB group	Bacteroidetes/Chlorobi group	2.93759	50.4	chromosome:NC_015311.1/CP002589.1	-	1	2398	2268	3/28/11	4/7/17	Complete Genome	J. Craig Venter Institute	SAMN00031760	GCA_000193395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/395/GCA_000193395.1_ASM19339v1	-	F0289
Escherichia coli O157:H7	83334	PRJNA322195	322195	Proteobacteria	Gammaproteobacteria	5.77552	50.3956	chromosome:NZ_CP015843.2/CP015843.2; plasmid p35K:NZ_CP015845.2/CP015845.2; plasmid pO157:NZ_CP015844.2/CP015844.2	-	3	6241	5761	5/25/16	8/12/17	Complete Genome	University of Florida	SAMN04531998	GCA_001651965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/965/GCA_001651965.2_ASM165196v2	-	FRIK2455
Escherichia coli ATCC 25922	1322345	PRJNA244551	244551	Proteobacteria	Gammaproteobacteria	5.20344	50.3906	chromosome:NZ_CP009072.1/CP009072.1; plasmid unnamed_1:NZ_CP009073.1/CP009073.1; plasmid unnamed_2:NZ_CP009074.1/CP009074.1	-	3	5374	5035	8/22/14	2/23/17	Complete Genome	Los Alamos National Laboratory	SAMN02929659	GCA_000743255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/255/GCA_000743255.1_ASM74325v1	25291776	ATCC 25922
Actinobacillus pleuropneumoniae serovar 1 str. 4074	228399	PRJNA47291	47291	Proteobacteria	Gammaproteobacteria	2.26245	41.2	-	ADOD01	44	2185	2074	9/13/10	3/30/17	Contig	Huazhong Agricultural University	SAMN02469615	GCA_000178495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/495/GCA_000178495.1_ASM17849v1	20802045	4074
Escherichia coli	562	PRJNA386074	386074	Proteobacteria	Gammaproteobacteria	5.40007	50.386	chromosome:NZ_CP021207.1/CP021207.1; plasmid p2474-3:NZ_CP021208.1/CP021208.1; plasmid p2474-MCR1:NZ_CP021209.1/CP021209.1; plasmid p2474-NDM1:NZ_CP021210.1/CP021210.1	-	4	5633	5245	5/16/17	5/24/17	Complete Genome	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN06925129	GCA_002142715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/715/GCA_002142715.1_ASM214271v1	27506685	strain Z247
Escherichia coli O157:H7 str. EC4115	444450	PRJNA27739	27739	Proteobacteria	Gammaproteobacteria	5.70417	50.386	chromosome:NC_011353.1/CP001164.1; plasmid pEC4115:NC_011351.1/CP001165.1; plasmid pO157:NC_011350.1/CP001163.1	-	3	6135	5697	10/8/08	2/22/17	Complete Genome	J. Craig Venter Institute	SAMN02603441	GCA_000021125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/125/GCA_000021125.1_ASM2112v1	22135463	EC4115
Escherichia coli O157:H7 str. SS17	1328859	PRJNA200626	200626	Proteobacteria	Gammaproteobacteria	5.65594	50.385	chromosome:NZ_CP008805.1/CP008805.1; plasmid p0157:NZ_CP008806.1/CP008806.1; plasmid pSS17:NZ_CP008807.1/CP008807.1	-	3	6061	5599	7/17/14	2/23/17	Complete Genome	Penn State	SAMN02872945	GCA_000730345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/345/GCA_000730345.1_ASM73034v1	25664460	SS17
Escherichia coli Xuzhou21	741093	PRJNA45823	45823	Proteobacteria	Gammaproteobacteria	5.51674	50.3828	chromosome:NC_017906.1/CP001925.1; plasmid pO157:NC_017907.1/CP001926.1; plasmid pO157_Sal:NC_017903.1/CP001927.1	-	3	5854	5457	5/9/12	3/22/17	Complete Genome	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02603645	GCA_000262125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/125/GCA_000262125.1_ASM26212v1	22558360	Xuzhou21
Escherichia coli	562	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.49497	50.382	chromosome:NZ_CP015241.1/CP015241.1; plasmid unnamed1:NZ_CP015242.1/CP015242.1	-	2	5756	5333	5/16/16	2/25/17	Complete Genome	CDC	SAMN04851091	GCA_001644745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/745/GCA_001644745.1_ASM164474v1	-	2013C-4465
Agrobacterium tumefaciens WRT31	1300225	PRJNA191529	191529	Proteobacteria	Alphaproteobacteria	5.87875	58.368	chromosome 1:NZ_CM002024.1/CM002024.1; chromosome 2:NZ_CM002025.1/CM002025.1	APLP01	4	5678	5435	7/22/13	4/2/17	Chromosome	Institut des Sciences du vegetal	SAMN02472045	GCA_000439225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/225/GCA_000439225.1_AtWRT31V1.0	23969055	WRT31
Shigella flexneri 4c	1617964	PRJNA288251	288251	Proteobacteria	Gammaproteobacteria	5.19607	50.3803	chromosome:CP012140.1; plasmid 1205p1:CP012141.1; plasmid 1205p2:CP012142.1; plasmid 1205p3:CP012143.1	-	4	5689	5122	3/3/16	3/3/16	Complete Genome	Hangzhou Centrer for Disease Control amd Prevention	SAMN03797408	GCA_001579965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/965/GCA_001579965.1_ASM157996v1	-	1205
Escherichia coli	562	PRJNA329265	329265	Proteobacteria	Gammaproteobacteria	5.49488	50.3712	chromosome:NZ_CP016546.1/CP016546.1; plasmid unnamed1:NZ_CP016547.1/CP016547.1; plasmid unnamed2:NZ_CP016548.1/CP016548.1; plasmid unnamed3:NZ_CP016549.1/CP016549.1; plasmid unnamed4:NZ_CP016550.1/CP016550.1; plasmid unnamed5:NZ_CP016551.1/CP016551.1	-	6	5882	5300	7/26/16	2/25/17	Complete Genome	Leiden University Medical Center	SAMN05407982	GCA_001693635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/635/GCA_001693635.1_ASM169363v1	-	O177:H21
Nitrosococcus oceani ATCC 19707	323261	PRJNA13993	13993	Proteobacteria	Gammaproteobacteria	3.52211	50.3241	chromosome:NC_007484.1/CP000127.1; plasmid A:NC_007483.1/CP000126.1	-	2	3348	3166	10/4/05	4/6/17	Complete Genome	DOE Joint Genome Institute	SAMN02598329	GCA_000012805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/805/GCA_000012805.1_ASM1280v1	-	ATCC 19707
Escherichia coli	562	PRJDB5007	382127	Proteobacteria	Gammaproteobacteria	5.21995	50.3136	chromosome:AP017620.1; plasmid pMRY15-131_1:AP017621.1; plasmid pMRY15-131_2:AP017622.1	-	3	4996	4877	4/7/17	4/7/17	Complete Genome	"Laboratory of Bacterial Genomics, Pathogen Genomics Center, National Institute of Infectious Diseases"	SAMD00056132	GCA_002357875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/875/GCA_002357875.1_ASM235787v1	-	MRY15-131
Paenibacillus sp. JDR-2	324057	PRJNA20399	20399	Terrabacteria group	Firmicutes	7.18493	50.3	chromosome:NC_012914.1/CP001656.1	-	1	6367	6170	7/2/09	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000047	GCA_000023585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/585/GCA_000023585.1_ASM2358v1	-	JDR-2
Escherichia coli	562	PRJNA391721	391721	Proteobacteria	Gammaproteobacteria	5.4773	50.2981	chromosome:NZ_CP022164.1/CP022164.1; plasmid pM160133_p1:NZ_CP022165.1/CP022165.1; plasmid pM160133_p2:NZ_CP022166.1/CP022166.1; plasmid pM160133_p3:NZ_CP022167.1/CP022167.1	-	4	5594	5219	7/3/17	7/5/17	Complete Genome	New York Medical College	SAMN07273977	GCA_002214205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/205/GCA_002214205.1_ASM221420v1	-	M160133
Escherichia coli APEC O1	405955	PRJNA16718	16718	Proteobacteria	Gammaproteobacteria	5.49765	50.2915	chromosome:NC_008563.1/CP000468.1; plasmid pAPEC-O1-ColBM:NC_009837.1/DQ381420.1; plasmid pAPEC-O1-R:NC_009838.1/DQ517526.1	-	3	5772	5382	10/4/06	3/22/17	Complete Genome	Iowa State University	SAMN02603424	GCA_000014845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/845/GCA_000014845.1_ASM1484v1	17293413	APEC O1
Escherichia coli	562	PRJDB5007	382127	Proteobacteria	Gammaproteobacteria	5.29507	50.2175	chromosome:AP017617.1; plasmid pMRY15-117_1:AP017618.1; plasmid pMRY15-117_2:AP017619.1	-	3	5051	4932	4/7/17	4/7/17	Complete Genome	"Laboratory of Bacterial Genomics, Pathogen Genomics Center, National Institute of Infectious Diseases"	SAMD00056131	GCA_002357895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/895/GCA_002357895.1_ASM235789v1	-	MRY15-117
Selenomonas ruminantium subsp. lactilytica TAM6421	927704	PRJNA60235	60235	Terrabacteria group	Firmicutes	3.63193	50.1648	chromosome:NC_017068.1/AP012292.1; plasmid pSRC1:NC_017078.1/AP012299.1; plasmid pSRC2:NC_017076.1/AP012293.1; plasmid pSRC3:NC_017073.1/AP012300.1; plasmid pSRC4:NC_017069.1/AP012294.1; plasmid pSRC5:NC_017074.1/AP012301.1; plasmid pSRC6:NC_017070.1/AP012295.1; plasmid pSRC7:NC_017077.1/AP012296.1; plasmid pSRC8:NC_017071.1/AP012297.1; plasmid pSRC9:NC_017072.1/AP012298.1	-	10	3533	3392	3/29/12	3/30/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00061115	GCA_000284095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/095/GCA_000284095.1_ASM28409v1	-	TAM6421
Spirosoma linguale DSM 74	504472	PRJNA28817	28817	FCB group	Bacteroidetes/Chlorobi group	8.49126	50.1563	chromosome:CP001769.1; plasmid pSLIN01:CP001770.1; plasmid pSLIN02:CP001771.1; plasmid pSLIN03:CP001772.1; plasmid pSLIN04:CP001773.1; plasmid pSLIN05:CP001774.1; plasmid pSLIN06:CP001775.1; plasmid pSLIN07:CP001776.1; plasmid pSLIN08:CP001777.1	-	9	7132	6938	1/13/10	12/24/13	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002598	GCA_000024525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/525/GCA_000024525.1_ASM2452v1	-	DSM 74
Xanthomonas axonopodis pv. melhusii	487834	PRJNA298616	298616	Proteobacteria	Gammaproteobacteria	5.08084	64.7	-	LOJW01	101	4592	4207	3/6/17	3/9/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN04145209	GCA_002019215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/215/GCA_002019215.1_ASM201921v1	-	LMG9050
Nitrosococcus watsonii C-113	105559	PRJNA40331	40331	Proteobacteria	Gammaproteobacteria	3.37329	50.1211	chromosome:NC_014315.1/CP002086.1; plasmid pNWAT01:NC_014316.1/CP002087.1; plasmid pNWAT02:NC_014317.1/CP002088.1	-	3	3165	2925	6/25/10	9/3/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598531	GCA_000143085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/143/085/GCA_000143085.1_ASM14308v1	-	C-113
Desulfomonile tiedjei DSM 6799	706587	PRJNA43133	43133	Proteobacteria	delta/epsilon subdivisions	6.52703	50.1107	chromosome:NC_018025.1/CP003360.1; plasmid pDESTI.01:NC_018026.1/CP003361.1	-	2	5679	5551	6/12/12	5/18/17	Complete Genome	DOE Joint Genome Institute	SAMN02232013	GCA_000266945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/945/GCA_000266945.1_ASM26694v1	-	DSM 6799
Prosthecochloris aestuarii DSM 271	290512	PRJNA12749	12749	FCB group	Bacteroidetes/Chlorobi group	2.5797	50.1104	chromosome:NC_011059.1/CP001108.1; plasmid pPAES01:NC_011061.1/CP001109.1	-	2	2425	2325	7/18/08	4/6/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598281	GCA_000020625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/625/GCA_000020625.1_ASM2062v1	-	DSM 271
Vibrio fluvialis	676	PRJNA360363	360363	Proteobacteria	Gammaproteobacteria	4.85166	50.1039	chromosome 1:NZ_CP019118.1/CP019118.1; chromosome 2:NZ_CP019119.1/CP019119.1	-	2	4542	4322	1/17/17	4/6/17	Complete Genome	Zhejiang University	SAMN06209376	GCA_001952955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/955/GCA_001952955.1_ASM195295v1	-	12605
Lactobacillus delbrueckii subsp. jakobsenii ZN7a-9 = DSM 26046	1217420	PRJNA355248	355248	Terrabacteria group	Firmicutes	1.8918	50.1	chromosome:NZ_CP018218.1/CP018218.1	-	1	1957	1645	12/5/16	4/6/17	Complete Genome	Korea University	SAMN06066887	GCA_001888925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/925/GCA_001888925.1_ASM188892v1	-	DSM 26046
Lactobacillus delbrueckii subsp. sunkii	1050107	PRJNA355244	355244	Terrabacteria group	Firmicutes	2.00434	50.1	chromosome:NZ_CP018217.1/CP018217.1	-	1	1987	1736	12/5/16	4/6/17	Complete Genome	Korea University	SAMN06066454	GCA_001888965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/965/GCA_001888965.1_ASM188896v1	-	JCM 17838
Anaplasma marginale str. Mississippi	517436	PRJNA29205	29205	Proteobacteria	Alphaproteobacteria	1.14152	49.8	-	ABOP01	82	1027	721	1/30/09	3/30/17	Contig	Washington State University	SAMN02436658	GCA_000172475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/475/GCA_000172475.1_ASM17247v1	19134224	Mississippi
Shigella dysenteriae S6554	1212565	PRJNA171072	171072	Proteobacteria	Gammaproteobacteria	4.79015	51.1	-	AMJS01	274	5407	4250	1/6/15	8/4/17	Contig	Institute for Genome Sciences	SAMN03276471	GCA_000815515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/515/GCA_000815515.1_ASM81551v1	-	S6554
Parabacteroides sp. YL27	1834200	PRJNA317592	317592	FCB group	Bacteroidetes/Chlorobi group	3.30646	50.1	chromosome:NZ_CP015402.2/CP015402.2	-	1	2752	2641	7/20/16	4/17/17	Complete Genome	University of Bern	SAMN04621612	GCA_001688845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/845/GCA_001688845.2_ASM168884v2	-	YL27
Shewanella putrefaciens	24	PRJNA381311	381311	Proteobacteria	Gammaproteobacteria	5.11056	47.8	-	NGZL01	199	4604	4369	5/24/17	5/30/17	Contig	Washington University	SAMN06673971	GCA_002157365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/365/GCA_002157365.1_ASM215736v1	-	SA70
Ehrlichia ruminantium	779	PRJNA356062	356062	Proteobacteria	Alphaproteobacteria	1.45538	27.5	-	MRDC01	1	973	867	6/12/17	6/14/17	Scaffold	CIRAD	SAMN06102416	GCA_002189655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/655/GCA_002189655.1_ASM218965v1	-	Senegalp63
Candidatus Nitrososphaera evergladensis SR1	1459636	PRJNA235208	235208	TACK group	Thaumarchaeota	2.95437	50.1	chromosome:CP007174.1	-	1	3548	3499	7/17/14	10/1/14	Complete Genome	University of Florida	SAMN03081530	GCA_000730285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/285/GCA_000730285.1_ASM73028v1	-	-
Shewanella marisflavi	260364	PRJNA392357	392357	Proteobacteria	Gammaproteobacteria	4.32145	50	chromosome:NZ_CP022272.1/CP022272.1	-	1	3814	3661	7/6/17	7/8/17	Complete Genome	Hubei Polytechnic University	SAMN07296262	GCA_002215585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/585/GCA_002215585.1_ASM221558v1	-	EP1
Lactobacillus delbrueckii subsp. delbrueckii	83684	PRJNA355324	355324	Terrabacteria group	Firmicutes	1.91051	50	chromosome:NZ_CP018216.1/CP018216.1	-	1	1921	1617	12/5/16	4/6/17	Complete Genome	Korea University	SAMN06074289	GCA_001888945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/945/GCA_001888945.1_ASM188894v1	-	KCTC 13731
Lactobacillus delbrueckii subsp. lactis	29397	PRJNA350761	350761	Terrabacteria group	Firmicutes	1.97273	50	chromosome:NZ_CP018156.1/CP018156.1	-	1	1999	1716	12/5/16	4/6/17	Complete Genome	Korea University	SAMN05945927	GCA_001888985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/985/GCA_001888985.1_ASM188898v1	-	KCTC 3035
Planococcus plakortidis	1038856	PRJNA328210	328210	Terrabacteria group	Firmicutes	3.26182	50	chromosome:NZ_CP016539.2/CP016539.2	-	1	3260	3081	7/20/16	4/17/17	Complete Genome	University of Malaya	SAMN05366384	GCA_001687605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/605/GCA_001687605.2_ASM168760v2	-	DSM 23997
Leptospirillum ferrooxidans C2-3	1162668	PRJDB73	157333	Nitrospirae	Nitrospira	2.55954	50	chromosome:NC_017094.1/AP012342.1	-	1	2587	2485	3/31/12	4/7/17	Complete Genome	"Ibaraki University, college of agriculture"	SAMD00061058	GCA_000284315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/315/GCA_000284315.1_ASM28431v1	22815442	C2-3
Acidaminococcus intestini RyC-MR95	568816	PRJNA32215	32215	Terrabacteria group	Firmicutes	2.48777	50	chromosome:NC_016077.1/CP003058.1	-	1	2417	2305	10/7/11	4/7/17	Complete Genome	"Ramon y Cajal University Hospital  of Madrid, Valencia University and Public Health Research Superior Center (CSISP) of Valencia's Goverment, Spain"	SAMN02603738	GCA_000230275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/275/GCA_000230275.1_ASM23027v1	22123762	RyC-MR95
Anaplasma centrale str. Israel	574556	PRJNA32765	32765	Proteobacteria	Alphaproteobacteria	1.20681	50	chromosome:NC_013532.1/CP001759.1	-	1	1026	943	11/24/09	4/7/17	Complete Genome	USDA-ARS	SAMN02604279	GCA_000024505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/505/GCA_000024505.1_ASM2450v1	19854912	Israel
Methanocorpusculum labreanum Z	410358	PRJNA18109	18109	Euryarchaeota	Methanomicrobia	1.80496	50	chromosome:NC_008942.1/CP000559.1	-	1	1876	1799	2/1/07	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN00623052	GCA_000015765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/765/GCA_000015765.1_ASM1576v1	21304657	Z
Prochlorococcus marinus str. MIT 9303	59922	PRJNA13496	13496	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.68268	50	chromosome:CP000554.1	-	1	3136	2997	1/22/07	1/31/14	Complete Genome	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02603917	GCA_000015705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/705/GCA_000015705.1_ASM1570v1	-	MIT 9303
Corynebacterium jeikeium	38289	PRJNA238244	238244	Terrabacteria group	Actinobacteria	2.42381	62.4	-	JFCH01	63	2153	2021	8/6/14	4/2/17	Contig	University of Washington	SAMN02641058	GCA_000738175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/175/GCA_000738175.1_Cj47444	25116839	Cj47444
Lactobacillus delbrueckii subsp. delbrueckii	83684	PRJNA383854	383854	Terrabacteria group	Firmicutes	2.01244	49.9	chromosome:NZ_CP021136.1/CP021136.1	-	1	2029	1755	5/16/17	5/24/17	Complete Genome	CERELA-CONICET	SAMN06812572	GCA_002142575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/575/GCA_002142575.1_ASM214257v1	-	TUA4408L
Bdellovibrio bacteriovorus str. Tiberius	1069642	PRJNA70801	70801	Proteobacteria	Oligoflexia	3.98859	49.9	chromosome:NC_019567.1/CP002930.1	-	1	3792	3740	11/28/12	3/31/17	Complete Genome	University of Nottingham	SAMN02604232	GCA_000317895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/895/GCA_000317895.1_ASM31789v1	23181807	Tiberius
Candidatus Pelagibacter ubique HTCC1013	1265757	PRJNA182739	182739	Proteobacteria	Alphaproteobacteria	1.30112	29.7	-	AWZX01	5	1372	1317	9/30/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02441456	GCA_000472585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/585/GCA_000472585.1_ASM47258v1	-	HTCC1013
Vibrio fluvialis	676	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.82772	49.8961	chromosome 1:NZ_CP014034.1/CP014034.1; chromosome 2:NZ_CP014035.1/CP014035.1	-	2	4526	4338	2/11/16	4/4/17	Complete Genome	US Food and Drug Administration 	SAMN03996321	GCA_001558415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/415/GCA_001558415.1_ASM155841v1	-	ATCC 33809
Escherichia fergusonii ATCC 35469	585054	PRJNA33369	33369	Proteobacteria	Gammaproteobacteria	4.64386	49.8834	chromosome:NC_011740.1/CU928158.2; plasmid pEFER:NC_011743.1/CU928144.1	-	2	4618	4349	12/16/08	2/22/17	Complete Genome	Genoscope	SAMEA3138228	GCA_000026225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/225/GCA_000026225.1_ASM2622v1	-	ATCC 35469T
Shigella boydii 4444-74	766140	PRJNA49059	49059	Proteobacteria	Gammaproteobacteria	4.97641	51	-	AKNB01	313	5541	4391	6/14/12	8/4/17	Contig	Institute for Genome Sciences	SAMN00752565	GCA_000268185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/185/GCA_000268185.1_ASM26818v1	-	4444-74
Lactobacillus delbrueckii subsp. bulgaricus	1585	PRJEB21527	393418	Terrabacteria group	Firmicutes	1.856	49.8	chromosome I:NZ_LT899687.1/LT899687.1	-	1	1958	1620	7/7/17	7/15/17	Complete Genome	Agricultural University of Athens	SAMEA104141261	GCA_900196735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/735/GCA_900196735.1_Lactobacillus_bulgaricus_ACA-DC_87	-	-
Oceanisphaera profunda	1416627	PRJNA387128	387128	Proteobacteria	Gammaproteobacteria	3.50886	49.8	chromosome:NZ_CP021377.1/CP021377.1	-	1	3095	2906	5/25/17	5/31/17	Complete Genome	Kyung Hee University	SAMN07139042	GCA_002157895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/895/GCA_002157895.1_ASM215789v1	24425742	SM1222
Lactobacillus delbrueckii subsp. bulgaricus	1585	PRJNA354491	354491	Terrabacteria group	Firmicutes	1.86818	49.8	chromosome:NZ_CP019120.1/CP019120.1	-	1	1970	1617	1/17/17	4/6/17	Complete Genome	Korea University	SAMN06046524	GCA_001953135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/135/GCA_001953135.1_ASM195313v1	-	DSM 20080
Escherichia albertii	208962	PRJDB3047	301492	Proteobacteria	Gammaproteobacteria	4.65717	49.8	chromosome Unknown:NZ_AP014857.1/AP014857.1	-	1	4693	4380	11/19/15	2/25/17	Complete Genome	University of Miyazaki	SAMD00026637	GCA_001549955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/955/GCA_001549955.1_ASM154995v1	26537224	EC06-170
Escherichia albertii	208962	PRJDB3047	301492	Proteobacteria	Gammaproteobacteria	4.56058	49.8	chromosome:NZ_AP014855.1/AP014855.1	-	1	4528	4232	11/6/15	9/7/17	Complete Genome	University of Miyazaki	SAMD00026650	GCA_002285455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/455/GCA_002285455.1_ASM228545v1	26537224	NIAH_Bird_3
Escherichia albertii	208962	PRJDB3047	301492	Proteobacteria	Gammaproteobacteria	4.59898	49.8	chromosome:NZ_AP014856.1/AP014856.1	-	1	4676	4365	11/6/15	9/7/17	Complete Genome	University of Miyazaki	SAMD00026629	GCA_002285475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/475/GCA_002285475.1_ASM228547v1	26537224	CB9786
Treponema azotonutricium ZAS-9	545695	PRJNA30191	30191	Spirochaetes	Spirochaetia	3.85567	49.8	chromosome:NC_015577.1/CP001841.1	-	1	3468	3345	5/23/11	4/17/17	Complete Genome	J. Craig Venter Institute	SAMN02603453	GCA_000214355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/355/GCA_000214355.1_ASM21435v1	21326336	ZAS-9
Leptospira borgpetersenii serovar Hardjo	328971	PRJNA296694	296694	Spirochaetes	Spirochaetia	3.8847	40.4155	chromosome 1:NZ_CP015052.1/CP015052.1; chromosome 2:NZ_CP015053.1/CP015053.1	-	2	3801	3145	4/11/16	4/5/17	Chromosome	INDICASAT-AIP	SAMN04102143	GCA_001618485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/485/GCA_001618485.1_ASM161848v1	-	NVSL S 818
Mycobacterium ulcerans str. Harvey	1299332	PRJNA191796	191796	Terrabacteria group	Actinobacteria	6.24743	65.2	-	JAOL01	209	9227	9177	1/27/14	2/22/14	Contig	Institute for Genome Sciences	SAMN02641612	GCA_000524035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/035/GCA_000524035.1_ASM52403v1	-	Harvey
Anaplasma marginale str. Florida	320483	PRJNA16369	16369	Proteobacteria	Alphaproteobacteria	1.20243	49.8	chromosome:NC_012026.1/CP001079.1	-	1	1038	959	2/3/09	3/29/17	Complete Genome	Washington State University	SAMN02604306	GCA_000020305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/305/GCA_000020305.1_ASM2030v1	"128,062,476,935,968,000,000"	Florida
Bartonella bacilliformis str. Heidi Mejia	1427332	PRJNA229741	229741	Proteobacteria	Alphaproteobacteria	1.40654	38.2	-	JHPQ01	4	1244	1142	3/28/14	4/2/17	Scaffold	Broad Institute	SAMN02419802	GCA_000607225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/225/GCA_000607225.1_Bart_baci_Heidi_Mejia_V1	-	Heidi Mejia
Anaplasma marginale str. St. Maries	234826	PRJNA40	40	Proteobacteria	Alphaproteobacteria	1.19769	49.8	chromosome:NC_004842.2/CP000030.1	-	1	1045	956	6/17/03	3/29/17	Complete Genome	Washington State University	SAMN02604305	GCA_000011945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/945/GCA_000011945.1_ASM1194v1	15618402	St. Maries
Photobacterium gaetbulicola Gung47	658445	PRJNA189839	189839	Proteobacteria	Gammaproteobacteria	5.90941	49.7275	chromosome 1:NZ_CP005973.1/CP005973.1; chromosome 2:NZ_CP005974.1/CP005974.1	-	2	5285	5037	3/4/15	4/10/17	Complete Genome	National Fisheries Research and Development Institute	SAMN03379852	GCA_000940995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/995/GCA_000940995.1_ASM94099v1	-	Gung47
Paenibacillus donghaensis	414771	PRJNA384283	384283	Terrabacteria group	Firmicutes	8.54233	49.7	chromosome:NZ_CP021780.1/CP021780.1	-	1	7703	7273	6/13/17	6/15/17	Complete Genome	"Shin's Lab., Kyungpook National University"	SAMN06833332	GCA_002192415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/415/GCA_002192415.1_ASM219241v1	-	KCTC 13049
Oenococcus oeni AWRIB318	1167631	PRJNA133377	133377	Terrabacteria group	Firmicutes	1.80845	38	-	ALAD01	26	1846	1701	8/9/12	3/23/17	Contig	The Australian Wine Research Institute	SAMN02471121	GCA_000286115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/115/GCA_000286115.1_AWRIB318_v1	22863143	AWRIB318
Streptococcus mitis	28037	PRJNA272120	272120	Terrabacteria group	Firmicutes	1.90283	40	-	LRQR01	55	1933	1775	2/2/16	4/4/17	Scaffold	The Genome Institute at Washington University	SAMN03956209	GCA_001546795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/795/GCA_001546795.1_ASM154679v1	-	CMW7705B
Ndongobacter massiliensis	1871025	PRJEB18029	354770	Terrabacteria group	Firmicutes	1.86488	49.7	chromosome contig00001:NZ_LT635480.1/LT635480.1	-	1	1758	1658	11/23/16	4/14/17	Complete Genome	URMITE	SAMEA4555317	GCA_900120375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/375/GCA_900120375.1_PRJEB18029	-	Marseille-P3170
Salinispora tropica CNS197	1137249	PRJNA169792	169792	Terrabacteria group	Actinobacteria	5.23672	69.4	-	AZWK01	75	4887	4593	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597241	GCA_000514695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/695/GCA_000514695.1_ASM51469v1	-	CNS197
Desulfitobacterium hafniense PCP-1	1090321	PRJNA165259	165259	Terrabacteria group	Firmicutes	5.56321	47.5	-	ARAZ01	45	5327	5095	4/22/13	5/18/17	Scaffold	DOE Joint Genome Institute	SAMN02256454	GCA_000379505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/505/GCA_000379505.1_ASM37950v1	-	PCP-1
Lactobacillus delbrueckii subsp. bulgaricus	1585	PRJNA304935	304935	Terrabacteria group	Firmicutes	1.87507	49.7	chromosome:NZ_CP013610.1/CP013610.1	-	1	1964	1630	12/18/15	4/4/17	Complete Genome	"Inner Mongolia Mengniu Dairy (Group) CO., LTD"	SAMN04309302	GCA_001469775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/775/GCA_001469775.1_ASM146977v1	26868391	MN-BM-F01
Paenibacillus naphthalenovorans	162209	PRJNA255122	255122	Terrabacteria group	Firmicutes	5.20014	49.7	chromosome:NZ_CP013652.1/CP013652.1	-	1	5135	4916	12/11/15	4/11/17	Complete Genome	Illinois Institute of Technology	SAMN02910228	GCA_001465255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/465/255/GCA_001465255.1_ASM146525v1	26868401	32O-Y
Escherichia albertii KF1	1440052	PRJNA232181	232181	Proteobacteria	Gammaproteobacteria	4.70188	49.7	chromosome:NZ_CP007025.1/CP007025.1	-	1	4823	4312	12/30/13	2/22/17	Complete Genome	"Department of Microbiology, Medical University of Bialystok"	SAMN02641387	GCA_000512125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/125/GCA_000512125.1_ASM51212v1	24482506	KF1
Lactobacillus delbrueckii subsp. bulgaricus 2038	353496	PRJNA16120	16120	Terrabacteria group	Firmicutes	1.87292	49.7	chromosome:NC_017469.1/CP000156.1	-	1	1959	1618	3/3/11	3/30/17	Complete Genome	Chinese National HGC	SAMN02603124	GCA_000191165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/165/GCA_000191165.1_ASM19116v1	-	2038
Salinispora arenicola CNP193	1169170	PRJNA175172	175172	Terrabacteria group	Actinobacteria	5.76635	69.4	-	ARGY01	79	5303	4929	4/19/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02440449	GCA_000375025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/025/GCA_000375025.1_ASM37502v1	-	CNP193
Delftia acidovorans NBRC 14950	1218107	PRJDB280	172103	Proteobacteria	Betaproteobacteria	6.63039	66.8	-	BCZP01	91	5960	5782	3/11/16	4/5/17	Contig	National Institute of Technology and Evaluation	SAMD00046897	GCA_001598795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/795/GCA_001598795.1_ASM159879v1	-	NBRC 14950
Rickettsia bellii str. RML Mogi	1359194	PRJNA212474	212474	Proteobacteria	Alphaproteobacteria	1.61807	31.5	-	LAOJ01	4	1609	1368	3/27/15	4/10/17	Contig	IGS	SAMN02666639	GCA_000965045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/045/GCA_000965045.1_ASM96504v1	-	RML Mogi
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	321956	PRJNA403	403	Terrabacteria group	Firmicutes	1.85695	49.7	chromosome:NC_008529.1/CP000412.1	-	1	1964	1625	10/13/06	3/29/17	Complete Genome	"US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc."	SAMN02598530	GCA_000014405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/405/GCA_000014405.1_ASM1440v1	17030793	ATCC BAA-365
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002	390333	PRJNA16871	16871	Terrabacteria group	Firmicutes	1.865	49.7	chromosome:NC_008054.1/CR954253.1	-	1	1961	1626	5/26/06	3/30/17	Complete Genome	Genoscope	SAMEA3138258	GCA_000056065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/056/065/GCA_000056065.1_ASM5606v1	16754859	ATCC 11842
Ralstonia pickettii OR214	1264675	PRJNA189031	189031	Proteobacteria	Betaproteobacteria	5.48059	63.4	-	APMQ01	46	5306	5081	4/19/13	5/19/17	Contig	Oak Ridge National Lab	SAMN01821533	GCA_000372665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/665/GCA_000372665.1_RalstonoaPickettii.strain_OR214_v1.0	23792748	OR214
Geobacillus stearothermophilus	1422	PRJNA282772	282772	Terrabacteria group	Firmicutes	3.02265	52	-	LDNT01	449	3328	2669	7/21/15	4/3/17	Scaffold	Massey University	SAMN03651169	GCA_001183915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/915/GCA_001183915.1_ASM118391v1	26472822	P3
Tatumella citrea	53336	PRJNA319878	319878	Proteobacteria	Gammaproteobacteria	4.49125	49.6856	chromosome:NZ_CP015579.1/CP015579.1; plasmid unnamed:NZ_CP015580.1/CP015580.1	-	2	4242	4070	6/2/17	6/5/17	Complete Genome	Chinese Academy of Sciences	SAMN04910067	GCA_002163585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/585/GCA_002163585.1_ASM216358v1	-	DSM 13699
Photobacterium damselae subsp. piscicida	38294	PRJNA335703	335703	Proteobacteria	Gammaproteobacteria	4.32484	41.3	-	MCFX02	16	4210	3195	8/28/16	4/10/17	Scaffold	Universidad de Santiago de Compostela	SAMN05450422	GCA_001715165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/165/GCA_001715165.2_ASM171516v2	-	L091106-03H
Borrelia afzelii PKo	390236	PRJNA17057	17057	Spirochaetes	Spirochaetia	1.2325	27.6984	chromosome:NC_008277.1/CP000395.1; plasmid cp27:NC_008274.1/CP000402.1; plasmid cp30:NC_008273.1/CP000400.1; plasmid lp25:NC_008569.1/CP000403.1; plasmid lp28:NC_008568.1/CP000401.1; plasmid lp32:NC_008567.1/CP000399.1; plasmid lp34:NC_008566.1/CP000398.1; plasmid lp60:NC_008564.1/CP000396.1; plasmid lp60-2:NC_008565.1/CP000397.1	-	12	1222	1126	7/31/06	3/30/17	Chromosome	"Fritz Lipmann Institute (former Institute of Molecular Biotechnology, IMB)"	SAMN02641500	GCA_000165595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/165/595/GCA_000165595.2_ASM16559v2	-	PKo
Faecalibacterium prausnitzii	853	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.85253	57.7	-	CYYL01	49	2773	2599	10/1/15	4/4/17	Contig	SC	SAMEA3545277	GCA_001406355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/355/GCA_001406355.1_13414_6_53	-	2789STDY5608869
Vibrio harveyi AOD131	1287887	PRJNA187546	187546	Proteobacteria	Gammaproteobacteria	6.12507	44.8	-	AOMR01	61	5788	5492	3/19/13	5/19/17	Scaffold	Food Industry Research and Development Institute	SAMN02470649	GCA_000347555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/555/GCA_000347555.1_VHAOD131.1	-	AOD131
Bifidobacterium adolescentis DSM 20087	1410644	PRJNA223463	223463	Terrabacteria group	Actinobacteria	2.05115	59.4	-	JNKM01	10	1698	1586	6/11/14	4/2/17	Contig	DOE Joint Genome Institute	SAMN02841222	GCA_000702865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/865/GCA_000702865.1_ASM70286v1	-	DSM 20087
Lactococcus garvieae 21881	998087	PRJNA63669	63669	Terrabacteria group	Firmicutes	2.1643	37.9	-	AFCC01	91	2235	2071	4/20/11	3/30/17	Contig	"Animal Health Department, Complutense University of Madrid"	SAMN02469656	GCA_000205485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/205/485/GCA_000205485.2_ASM20548v2	21622739	21881
Tatumella citrea	53336	PRJNA319871	319871	Proteobacteria	Gammaproteobacteria	4.49098	49.6856	chromosome:NZ_CP015581.1/CP015581.1; plasmid unnamed:NZ_CP015582.1/CP015582.1	-	2	4237	4066	6/2/17	6/5/17	Complete Genome	Chinese Academy of Sciences	SAMN04910026	GCA_002163605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/605/GCA_002163605.1_ASM216360v1	-	ATCC 39140
Methanothermobacter sp. EMTCatA1	2017966	PRJDB5909	393802	Euryarchaeota	Methanobacteria	1.71998	49.6	chromosome:AP018336.1	-	1	1856	1814	7/8/17	7/8/17	Complete Genome	"Department of System Innovation, Graduate School of Engineering, the University of Tokyo, Tokyo, Japan"	SAMD00084331	GCA_002356395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/395/GCA_002356395.1_ASM235639v1	-	-
Methylobacterium radiotolerans	31998	PRJNA278214	278214	Proteobacteria	Alphaproteobacteria	6.58909	70.9	-	LDRO01	334	6239	6034	12/22/15	12/22/15	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401379	GCA_001476225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/225/GCA_001476225.1_ASM147622v1	26793183	SB2
Orientia tsutsugamushi str. Gilliam	1359184	PRJNA212442	212442	Proteobacteria	Alphaproteobacteria	1.9977	30.5	-	LANO01	76	2192	931	3/27/15	4/11/17	Contig	IGS	SAMN02666744	GCA_000964615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/615/GCA_000964615.1_ASM96461v1	-	Gilliam
Oxalobacter formigenes	847	PRJNA353993	353993	Proteobacteria	Betaproteobacteria	2.46887	49.6	chromosome:NZ_CP018787.1/CP018787.1	-	1	2325	2232	5/11/17	5/22/17	Complete Genome	UNIVERSITY OF FLORIDA	SAMN06036219	GCA_002127965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/965/GCA_002127965.1_ASM212796v1	-	HC-1
Oxalobacter formigenes OXCC13	556269	PRJNA353994	353994	Proteobacteria	Betaproteobacteria	2.43365	49.6	chromosome:NZ_CP019430.1/CP019430.1	-	1	2271	2177	5/11/17	5/22/17	Complete Genome	UNIVERSITY OF FLORIDA	SAMN06036220	GCA_002128345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/345/GCA_002128345.1_ASM212834v1	-	OXCC13
Lactobacillus delbrueckii subsp. bulgaricus	1585	PRJNA327771	327771	Terrabacteria group	Firmicutes	1.86175	49.6	chromosome:NZ_CP016393.1/CP016393.1	-	1	1934	1547	2/16/17	4/6/17	Complete Genome	Inner Mongolia Agricultural University	SAMN05357477	GCA_002000885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/885/GCA_002000885.1_ASM200088v1	-	ND04
Pyrobaculum islandicum DSM 4184	384616	PRJNA16743	16743	TACK group	Crenarchaeota	1.8264	49.6	chromosome:NC_008701.1/CP000504.1	-	1	2075	1966	12/20/06	8/22/15	Complete Genome	DOE Joint Genome Institute	SAMN02598374	GCA_000015205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/205/GCA_000015205.1_ASM1520v1	-	DSM 4184
Ureaplasma urealyticum serovar 9 str. ATCC 33175	550773	PRJNA19095	19095	Terrabacteria group	Tenericutes	0.947165	26.2	-	AAYQ02	10	767	698	3/21/07	3/30/17	Contig	TIGR	SAMN02435846	GCA_000169595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/595/GCA_000169595.1_ASM16959v1	-	ATCC 33175
Lactobacillus delbrueckii subsp. bulgaricus ND02	767455	PRJNA49147	49147	Terrabacteria group	Firmicutes	2.13198	49.5857	chromosome:NC_014727.1/CP002341.1; plasmid unnamed:NC_014728.1/CP002342.1	-	2	2153	1871	11/19/10	3/30/17	Complete Genome	"The Key Laboratory of Dairy Biotechnology and Bioengineering, Education Ministry of P. R. China, Department of Food Science and Engineering, Inner Mongolia Agricultural University, China"	SAMN02603937	GCA_000182835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/182/835/GCA_000182835.1_ASM18283v1	21515763	ND02
Aliivibrio fischeri	668	PRJNA311605	311605	Proteobacteria	Gammaproteobacteria	4.3715	38.2	-	LTYW01	61	4037	3896	5/9/16	4/5/17	Contig	MIT	SAMN04486009	GCA_001640305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/305/GCA_001640305.1_ASM164030v1	27128997	KB2B1
Murdochiella vaginalis	1852373	PRJEB14245	324388	Terrabacteria group	Firmicutes	1.67149	49.5	chromosome contig00001:NZ_LT632322.1/LT632322.1	-	1	1512	1432	11/17/16	4/14/17	Complete Genome	URMITE	SAMEA4021839	GCA_900119705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/705/GCA_900119705.1_PRJEB14245	-	Marseille-P2341
Methylophilus sp. TWE2	1662285	PRJNA285521	285521	Proteobacteria	Betaproteobacteria	3.07904	49.5	chromosome:NZ_CP012020.1/CP012020.1	-	1	2929	2859	7/21/15	4/10/17	Complete Genome	fudan university	SAMN03754658	GCA_001183865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/865/GCA_001183865.1_ASM118386v1	-	TWE2
Burkholderia oklahomensis EO147	441163	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.26375	67	-	LOSS01	126	6862	6325	1/21/16	4/11/17	Contig	Northern Arizona University	SAMN03449124	GCA_001522105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/105/GCA_001522105.1_ASM152210v1	-	E0147
Spirosoma radiotolerans	1379870	PRJNA271221	271221	FCB group	Bacteroidetes/Chlorobi group	7.02935	49.5	chromosome:NZ_CP010429.1/CP010429.1	-	1	5725	5602	4/21/15	4/10/17	Complete Genome	Kyungpook National University	SAMN03273316	GCA_000974425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/425/GCA_000974425.1_ASM97442v1	24748440	DG5A
Pseudothermotoga hypogea DSM 11164 = NBRC 106472	1123384	PRJNA234771	234771	Thermotogae	Thermotogae	2.16542	49.5	chromosome:NZ_CP007141.1/CP007141.1	-	1	2141	2069	1/7/15	9/19/17	Complete Genome	University of Waterloo	SAMN02584724	GCA_000816145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/145/GCA_000816145.1_ASM81614v1	-	DSM 11164 = NBRC 106472
Pseudothermotoga hypogea DSM 11164 = NBRC 106472	1123384	PRJDB362	172331	Thermotogae	Thermotogae	2.16517	49.5	chromosome:NC_022795.1/AP014508.1	-	1	2137	2067	10/24/13	4/9/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00061031	GCA_000504105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/105/GCA_000504105.1_ASM50410v1	24676729	NBRC 106472
Treponema pallidum subsp. pertenue str. Gauthier	491080	PRJNA30653	30653	Spirochaetes	Spirochaetia	1.13942	52.8	chromosome:NC_016843.1/CP002376.1	-	1	1065	1004	2/6/12	3/30/17	Chromosome	Baylor College of Medicine	SAMN02603004	GCA_000246795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/795/GCA_000246795.1_ASM24679v1	-	Gauthier
Methanothermobacter thermautotrophicus str. Delta H	187420	PRJNA289	289	Euryarchaeota	Methanobacteria	1.75138	49.5	chromosome:NC_000916.1/AE000666.1	-	1	1870	1756	11/17/97	4/17/17	Complete Genome	Genome Therapeutics Corporation	SAMN02603244	GCA_000008645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/645/GCA_000008645.1_ASM864v1	9371463	Delta H
Ochrobactrum anthropi 60a	1201037	PRJNA169004	169004	Proteobacteria	Alphaproteobacteria	4.59002	56.1	-	AMCC01	1004	4607	4062	6/10/13	4/1/17	Contig	University of Georgia	SAMN02471780	GCA_000409625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/625/GCA_000409625.1_60a	-	60a
Grimontia hollisae	673	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	3.99827	49.4846	chromosome 1:NZ_CP014056.1/CP014056.1; chromosome 2:NZ_CP014055.1/CP014055.1	-	2	3675	3368	2/11/16	4/12/17	Complete Genome	US Food and Drug Administration 	SAMN03996327	GCA_001558255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/255/GCA_001558255.1_ASM155825v1	-	ATCC 33564
Synechococcus sp. NIES-970	1827144	PRJDB4740	374013	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.12386	49.4284	chromosome:AP017959.1; plasmid plasmid1:AP017960.1; plasmid plasmid2:AP017961.1; plasmid plasmid3:AP017962.1; plasmid plasmid4:AP017963.1	-	5	2994	2943	2/9/17	2/9/17	Complete Genome	National Institute for Environmental Studies	SAMD00051107	GCA_002356215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/215/GCA_002356215.1_ASM235621v1	-	NIES-970
Cellvibrio sp. PSBB023	1945512	PRJNA369694	369694	Proteobacteria	Gammaproteobacteria	4.7053	49.4	chromosome:NZ_CP019799.1/CP019799.1	-	1	4062	3910	2/28/17	3/2/17	Complete Genome	University of Minnesota	SAMN06291465	GCA_002007605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/605/GCA_002007605.1_ASM200760v1	-	PSBB023
Mycobacterium marinum MB2	1288036	PRJNA174278	174278	Terrabacteria group	Actinobacteria	6.13439	65.7	-	ANPM01	3	5359	5127	7/8/13	4/8/17	Contig	Gyeongsang National University	SAMN02469867	GCA_000419335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/335/GCA_000419335.1_MB2	-	MB2
Candidatus Saccharibacteria bacterium RAAC3_TM7_1	1394711	PRJNA217186	217186	unclassified Bacteria	Bacteria candidate phyla	0.845464	49.4	chromosome:CP006915.1	-	1	961	920	12/4/13	12/4/13	Complete Genome	"University of California, Berkeley"	SAMN00998488	GCA_000503915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/915/GCA_000503915.1_ASM50391v1	-	RAAC3_TM7_1
Synechococcus sp. PCC 8807	195248	PRJNA308952	308952	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.30409	49.3702	chromosome:NZ_CP016483.1/CP016483.1; plasmid unnamed1:NZ_CP016484.1/CP016484.1; plasmid unnamed2:NZ_CP016485.1/CP016485.1; plasmid unnamed3:NZ_CP016486.1/CP016486.1; plasmid unnamed4:NZ_CP016487.1/CP016487.1; plasmid unnamed5:NZ_CP016488.1/CP016488.1; plasmid unnamed6:NZ_CP016489.1/CP016489.1	-	7	3179	3083	7/25/16	4/17/17	Complete Genome	Pennsylvania State University	SAMN04422305	GCA_001693295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/295/GCA_001693295.1_ASM169329v1	-	PCC 8807
Burkholderia ambifaria IOP40-10	396596	PRJNA20669	20669	Proteobacteria	Betaproteobacteria	7.68999	66.3	-	ABLC01	629	7250	6554	3/17/08	5/18/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000046	GCA_000181975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/181/975/GCA_000181975.1_ASM18197v1	-	IOP40-10
Bradyrhizobium japonicum USDA 124	1038862	PRJNA170887	170887	Proteobacteria	Alphaproteobacteria	9.00227	64	-	ARFJ01	123	8593	8182	4/19/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441026	GCA_000374205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/205/GCA_000374205.1_ASM37420v1	-	USDA 124
Microcystis aeruginosa PCC 9432	1160280	PRJEA88171	88171	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.99494	42.5	-	CAIH01	132	5023	4543	5/28/12	3/31/17	Scaffold	Genoscope CEA	SAMEA2272688	GCA_000307995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/995/GCA_000307995.2_ASM30799v2	-	PCC 9432
Methanobrevibacter smithii TS145B	911117	PRJNA59641	59641	Euryarchaeota	Methanobacteria	1.79737	31.1	-	AELL01	54	1756	1496	2/17/11	3/30/17	Contig	Washington University in St.Louis	SAMN02436664	GCA_000189815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/815/GCA_000189815.2_ASM18981v2	21317366	TS145B
Bifidobacterium dentium JCM 1195 = DSM 20436	1150423	PRJNA237576	237576	Terrabacteria group	Actinobacteria	2.61478	58.5	-	JDUY01	32	2224	2128	11/4/14	4/2/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442045	GCA_000771725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/725/GCA_000771725.1_DSM-20436	25658111	DSM 20436
Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957	663952	PRJNA39781	39781	Terrabacteria group	Firmicutes	2.14184	39.4	chromosome:NZ_CM001076.1/CM001076.1	AEGO01	1	4320	3977	2/7/11	3/30/17	Chromosome	Cornell University	SAMN02428924	GCA_000188315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/315/GCA_000188315.1_ASM18831v1	21282711	ATCC 27957
Borrelia garinii PBr	498743	PRJNA28625	28625	Spirochaetes	Spirochaetia	1.26559	27.9002	plasmid PBr_cp26:NC_011840.1/CP001305.1; plasmid PBr_cp32-10:NC_011842.1/CP001306.1; plasmid PBr_cp32-5:NC_011848.1/CP001303.1; plasmid PBr_lp17:NC_011861.1/CP001309.1; plasmid PBr_lp25:NC_011856.1/CP001301.1; plasmid PBr_lp28-1:NC_011854.1/CP001310.1; plasmid PBr_lp28-3:NC_011858.1/CP001307.1; plasmid PBr_lp28-4:NC_011860.1/CP001304.1; plasmid PBr_lp28-7:NC_011855.1/CP001311.1; plasmid PBr_lp36:NC_011857.1/CP001302.1; plasmid PBr_lp54:NC_011859.1/CP001308.1	ABJV02	16	1238	1119	2/6/08	3/6/17	Contig	J. Craig Venter Institute	SAMN02436232	GCA_000172275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/275/GCA_000172275.2_ASM17227v2	22123755	PBr
Lactobacillus delbrueckii subsp. indicus	249265	PRJNA355325	355325	Terrabacteria group	Firmicutes	2.02186	49.3681	chromosome:NZ_CP018614.1/CP018614.1; plasmid pLD01:NZ_CP018612.1/CP018612.1; plasmid pLD02:NZ_CP018613.1/CP018613.1	-	3	2070	1707	12/19/16	4/6/17	Complete Genome	Korea University	SAMN06074288	GCA_001908415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/415/GCA_001908415.1_ASM190841v1	-	JCM 15610
Methanothermobacter sp. CaT2	866790	PRJDA50633	50633	Euryarchaeota	Methanobacteria	1.73102	49.3561	chromosome:NZ_AP011952.1/AP011952.1; plasmid pCaT2:NZ_AP011953.1/AP011953.1	-	2	1810	1739	12/4/12	4/17/17	Complete Genome	National Institute of Genetics	SAMD00060975	GCA_000828575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/575/GCA_000828575.1_ASM82857v1	"2,399,057,724,983,530"	CaT2
Synechococcus sp. PCC 73109	374982	PRJNA308952	308952	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.29868	49.3382	chromosome:NZ_CP013998.1/CP013998.1; plasmid unnamed1:NZ_CP013999.1/CP013999.1; plasmid unnamed2:NZ_CP014000.1/CP014000.1; plasmid unnamed3:NZ_CP014001.1/CP014001.1; plasmid unnamed4:NZ_CP014002.1/CP014002.1; plasmid unnamed5:NZ_CP014003.1/CP014003.1	-	6	3139	3037	1/21/16	4/16/17	Complete Genome	Pennsylvania State University	SAMN04422304	GCA_001521855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/855/GCA_001521855.1_ASM152185v1	-	PCC 73109
Synechococcus sp. PCC 7003	374981	PRJNA308952	308952	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.34509	49.3031	chromosome:NZ_CP016474.1/CP016474.1; plasmid unnamed1:NZ_CP016475.1/CP016475.1; plasmid unnamed2:NZ_CP016476.1/CP016476.1	-	3	3177	3073	7/25/16	4/17/17	Complete Genome	Pennsylvania State University	SAMN04422302	GCA_001693255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/255/GCA_001693255.1_ASM169325v1	-	PCC 7003
Dehalococcoides mccartyi	61435	PRJNA376155	376155	Terrabacteria group	Chloroflexi	1.2716	49.3	chromosome:NZ_CP019866.1/CP019866.1	-	1	1361	1295	2/28/17	3/2/17	Complete Genome	University of Toronto	SAMN06350848	GCA_002007905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/905/GCA_002007905.1_ASM200790v1	-	KBTCE3
Neisseria sp. 10022	1853276	PRJNA394640	394640	Proteobacteria	Betaproteobacteria	2.5119	49.2	chromosome:CP023429.1	-	1	2516	1927	9/21/17	9/21/17	Complete Genome	China disease prevention and control center	SAMN07357044	GCA_002327085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/085/GCA_002327085.1_ASM232708v1	-	10022
Rufibacter sp. DG15C	1379909	PRJNA273388	273388	FCB group	Bacteroidetes/Chlorobi group	4.14374	49.2	chromosome:NZ_CP010776.1/CP010776.1	-	1	3574	3483	2/29/16	4/12/17	Complete Genome	Seoul Women's University	SAMN03291351	GCA_001577755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/755/GCA_001577755.1_ASM157775v1	-	DG15C
Ruminiclostridium thermocellum JW20	492476	PRJNA28257	28257	Terrabacteria group	Firmicutes	3.76755	39.1	-	ABVG02	21	3289	3048	8/15/08	3/30/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN02441805	GCA_000173015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/015/GCA_000173015.1_ASM17301v1	-	JW20
Lactobacillus koreensis	637971	PRJNA285019	285019	Terrabacteria group	Firmicutes	3.00681	49.2	chromosome:NZ_CP012033.1/CP012033.1	-	1	2728	2613	7/9/15	4/10/17	Complete Genome	Seoul Women's University	SAMN03734960	GCA_001050435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/435/GCA_001050435.1_ASM105043v1	-	26-25
Comamonas testosteroni S44	563045	PRJNA47053	47053	Proteobacteria	Betaproteobacteria	5.53416	61.4	-	ADVQ01	112	5134	4940	6/21/10	5/18/17	Contig	Huazhong Agricultural University	SAMN02471018	GCA_000178915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/915/GCA_000178915.1_ASM17891v1	21704702	S44
Bacillus mycoides DSM 2048	526997	PRJNA29701	29701	Terrabacteria group	Firmicutes	5.56191	35.2	chromosome:NZ_CM000742.1/CM000742.1	ACMU01	1	11715	11151	4/30/09	6/15/17	Chromosome	Naval Medical Research Center	SAMN00727646	GCA_000003925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/003/925/GCA_000003925.1_ASM392v1	22645259	DSM 2048
Yersinia frederiksenii	29484	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.83725	47.5	-	MWTK01	77	4434	4065	6/14/17	6/19/17	Contig	SRCAMB	SAMN06344230	GCA_002192925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/925/GCA_002192925.1_ASM219292v1	-	SCPM-O-B-3986
Yersinia kristensenii	28152	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.32469	47.3	-	CQAQ01	27	4020	3809	3/22/15	4/3/17	Contig	SC	SAMEA859900	GCA_001158505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/505/GCA_001158505.1_5139_5_5	-	FE80982
Dehalogenimonas sp. WBC-2	943347	PRJNA269960	269960	Terrabacteria group	Chloroflexi	1.72573	49.2	chromosome:CP011392.1	-	1	1800	1721	5/8/15	10/4/16	Complete Genome	University of Toronto	SAMN03565657	GCA_001005265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/265/GCA_001005265.1_ASM100526v1	-	-
Candidatus Methanoplasma termitum	1577791	PRJNA268719	268719	Euryarchaeota	Thermoplasmata	1.48867	49.2	chromosome:NZ_CP010070.1/CP010070.1	-	1	1449	1383	12/11/14	4/10/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03224143	GCA_000800805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/805/GCA_000800805.1_ASM80080v1	25501486	MpT1
Micrococcus luteus	1270	PRJNA239286	239286	Terrabacteria group	Actinobacteria	2.50683	73	-	JFYP01	183	2362	2124	4/14/14	4/2/17	Contig	Monash University Malaysia	SAMN02676624	GCA_000632005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/005/GCA_000632005.1_Willow_Endophyte_RIT304	24812212	RIT304
Synechococcus sp. PCC 7002	32049	PRJNA28247	28247	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.40993	49.1616	chromosome:NC_010475.1/CP000951.1; plasmid pAQ1:NC_010476.1/CP000952.1; plasmid pAQ3:NC_010477.1/CP000953.1; plasmid pAQ4:NC_010478.1/CP000954.1; plasmid pAQ5:NC_010479.1/CP000955.1; plasmid pAQ6:NC_010480.1/CP000956.1; plasmid pAQ7:NC_010474.1/CP000957.1	-	7	3223	3148	3/14/08	4/17/17	Complete Genome	Penn State University	SAMN01081740	GCA_000019485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/485/GCA_000019485.1_ASM1948v1	-	PCC 7002; ATCC 27264
Helicobacter pullorum	35818	PRJNA326807	326807	Proteobacteria	delta/epsilon subdivisions	1.85537	34.1	-	MANK01	101	1856	1738	8/4/16	4/5/17	Contig	University of Hyderabad	SAMN05292905	GCA_001698615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/615/GCA_001698615.1_ASM169861v1	-	NAP14B36
Synechococcus sp. PCC 7117	195498	PRJNA308952	308952	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.4321	49.1233	chromosome:NZ_CP016477.1/CP016477.1; plasmid unnamed1:NZ_CP016478.1/CP016478.1; plasmid unnamed2:NZ_CP016479.1/CP016479.1; plasmid unnamed3:NZ_CP016480.1/CP016480.1; plasmid unnamed4:NZ_CP016481.1/CP016481.1; plasmid unnamed5:NZ_CP016482.1/CP016482.1	-	6	3273	3162	7/25/16	4/17/17	Complete Genome	Pennsylvania State University	SAMN04422303	GCA_001693275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/275/GCA_001693275.1_ASM169327v1	-	PCC 7117
Salinicoccus sp. BAB 3246	1437774	PRJNA342322	342322	Terrabacteria group	Firmicutes	0.713204	49.1	chromosome:CP020916.1	-	1	-	-	7/6/17	7/6/17	Complete Genome	Hem. North Gujarat Unviersity	SAMN06324084	GCA_002215465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/465/GCA_002215465.1_ASM221546v1	-	BAB3246
Brevefilum fermentans	1986204	PRJEB19949	379094	Terrabacteria group	Chloroflexi	2.57443	49.1	chromosome I:NZ_LT859958.1/LT859958.1	-	1	2253	2188	6/2/17	6/12/17	Complete Genome	AALBORG UNIVERSITY	SAMEA104092011	GCA_900184705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/184/705/GCA_900184705.1_CAMBI-1	-	-
Geobacillus thermodenitrificans	33940	PRJNA347632	347632	Terrabacteria group	Firmicutes	3.50528	49.1	chromosome:NZ_CP017694.1/CP017694.1	-	1	3561	3324	3/23/17	3/25/17	Complete Genome	Kyungpook National University	SAMN05894115	GCA_002072065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/065/GCA_002072065.1_ASM207206v1	-	KCTC3902
Dehalococcoides mccartyi	61435	PRJNA376155	376155	Terrabacteria group	Chloroflexi	1.3292	49.1	chromosome:NZ_CP019865.1/CP019865.1	-	1	1431	1364	2/28/17	3/2/17	Complete Genome	University of Toronto	SAMN06350847	GCA_002007825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/825/GCA_002007825.1_ASM200782v1	-	KBTCE2
Actinobacteria bacterium IMCC25003	1848255	PRJNA321001	321001	Terrabacteria group	Actinobacteria	1.35395	49.1	chromosome:NZ_CP015603.1/CP015603.1	-	1	1397	1348	2/16/17	9/4/17	Complete Genome	Inha University	SAMN04961843	GCA_002284855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/855/GCA_002284855.1_ASM228485v1	28186143	IMCC25003
Lactobacillus delbrueckii subsp. lactis	29397	PRJNA355327	355327	Terrabacteria group	Firmicutes	2.26338	49.1	chromosome:NZ_CP018215.1/CP018215.1	-	1	2296	1950	12/5/16	4/6/17	Complete Genome	Korea University	SAMN06074287	GCA_001888905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/905/GCA_001888905.1_ASM188890v1	-	KCCM 34717
Vibrio splendidus	29497	PRJNA294194	294194	Proteobacteria	Gammaproteobacteria	5.33038	44.1	-	LIZK01	54	4729	4525	10/2/15	4/4/17	Contig	UC Davis	SAMN04017837	GCA_001306195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/195/GCA_001306195.1_ASM130619v1	26893436	UCD-SED7
Obesumbacterium proteus	82983	PRJNA311640	311640	Proteobacteria	Gammaproteobacteria	5.0118	49.1	chromosome:NZ_CP014608.1/CP014608.1	-	1	4789	4467	3/10/16	4/12/17	Complete Genome	Charles River	SAMN04487151	GCA_001586165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/165/GCA_001586165.1_ASM158616v1	-	DSM 2777
Brucella ceti B1/94	520457	PRJNA33573	33573	Proteobacteria	Alphaproteobacteria	3.33716	57.1	-	ACEK01	14	3323	3115	2/18/09	3/30/17	Scaffold	Broad Institute	SAMN02595292	GCA_000158775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/775/GCA_000158775.1_ASM15877v1	-	B1/94
Enterococcus flavescens ATCC 49996	1158603	PRJNA88843	88843	Terrabacteria group	Firmicutes	3.59016	42.5	-	AJAM01	10	3575	3371	5/3/13	4/1/17	Scaffold	Broad Institute	SAMN00809112	GCA_000393915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/915/GCA_000393915.1_Ente_flav_ATCC49996_V1	-	ATCC 49996
Enterococcus gallinarum	1353	PRJNA245438	245438	Terrabacteria group	Firmicutes	2.98152	40.8343	plasmid pA6981:NZ_CM003134.1/CM003134.1	JMGP01	20	2924	2788	1/27/15	4/10/17	Contig	OAHPP	SAMN02737380	GCA_000829545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/545/GCA_000829545.2_ASM82954v2	25948610	A6981
Paenibacillus sp. FSL H7-0357	1536774	PRJNA258344	258344	Terrabacteria group	Firmicutes	7.69275	49.1	chromosome:NZ_CP009241.1/CP009241.1	-	1	6857	6581	9/26/14	4/9/17	Complete Genome	Cornell University	SAMN02996504	GCA_000758525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/525/GCA_000758525.1_ASM75852v1	-	FSL H7-0357
[Clostridium] bolteae	208479	PRJNA393727	393727	Terrabacteria group	Firmicutes	6.61404	49.0503	chromosome:NZ_CP022464.2/CP022464.2; plasmid unnamed:NZ_CP022465.2/CP022465.2	-	2	6165	5937	7/27/17	9/20/17	Complete Genome	University of North Carolina at Chapel Hill	SAMN07340702	GCA_002234575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/234/575/GCA_002234575.2_ASM223457v2	-	ATCC BAA-613
Brucella pinnipedialis M292/94/1	520462	PRJNA33563	33563	Proteobacteria	Alphaproteobacteria	3.37352	57.1	-	ACEF01	15	3347	3170	2/18/09	4/7/17	Scaffold	Broad Institute	SAMN02595287	GCA_000158675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/675/GCA_000158675.1_ASM15867v1	-	M292/94/1
Dickeya dadantii	204038	PRJNA352897	352897	Proteobacteria	Gammaproteobacteria	4.69447	56.5	-	MPDL01	324	4215	4055	2/12/17	4/17/17	Contig	Institution of biotechnology	SAMN06006680	GCA_001995275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/275/GCA_001995275.1_ASM199527v1	-	CZ1501
Burkholderia glumae	337	PRJNA267193	267193	Proteobacteria	Betaproteobacteria	6.66399	68.3	-	JTDQ01	1121	6151	5310	12/11/14	4/2/17	Contig	Institut de Recherche pour le Developpement	SAMN03178256	GCA_000801065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/065/GCA_000801065.1_BG_NCPPB3923_E1.0	-	NCPPB 3923
[Eubacterium] siraeum V10Sc8a	717961	PRJNA45919	45919	Terrabacteria group	Firmicutes	2.83612	45.2	chromosome:FP929059.1	-	1	2254	2211	3/25/10	2/27/15	Chromosome	metaHIT	SAMEA3138373	GCA_000210635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/635/GCA_000210635.1_ASM21063v1	-	V10Sc8a
Anaerotruncus colihominis	169435	PRJNA377666	377666	Terrabacteria group	Firmicutes	4.0876	53.5	-	NFKQ01	105	4158	3953	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473638	GCA_002160465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/465/GCA_002160465.1_ASM216046v1	-	An174
Clostridium sporogenes	1509	PRJNA239205	239205	Terrabacteria group	Firmicutes	4.10665	27.8	-	JFBQ01	16	3879	3623	5/6/14	4/2/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02650407	GCA_000685115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/115/GCA_000685115.1_CSO1	26221421	DSM 795
Lactobacillus delbrueckii subsp. lactis	29397	PRJNA398581	398581	Terrabacteria group	Firmicutes	2.23761	49	chromosome:NZ_CP023139.1/CP023139.1	-	1	2272	1914	9/5/17	9/7/17	Complete Genome	Korea University	SAMN07513435	GCA_002285775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/775/GCA_002285775.1_ASM228577v1	-	KCTC 3034
Coprococcus comes	410072	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.28434	42.4	-	CYZK01	55	3191	3017	10/1/15	4/11/17	Contig	SC	SAMEA3545332	GCA_001406395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/395/GCA_001406395.1_13470_2_85	-	2789STDY5834866
Providencia stuartii ATCC 25827	471874	PRJNA20553	20553	Proteobacteria	Gammaproteobacteria	4.61036	41.3	-	ABJD02	52	4381	4059	1/22/08	4/10/17	Scaffold	Washington University Genome Sequencing Center	SAMN00000020	GCA_000154865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/865/GCA_000154865.1_ASM15486v1	-	ATCC 25827
[Ruminococcus] torques	33039	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.01787	40.9	-	CZBX01	38	2855	2672	10/1/15	4/4/17	Contig	SC	SAMEA3545353	GCA_001406755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/755/GCA_001406755.1_14207_7_12	-	2789STDY5834889
Blautia obeum	40520	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.90408	41.7	-	CZBA01	60	3760	3519	10/1/15	4/4/17	Contig	SC	SAMEA3545384	GCA_001405215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/215/GCA_001405215.1_14207_7_44	-	2789STDY5834921
[Eubacterium] hallii	39488	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.3362	38.5	-	CYYC01	90	3078	2877	10/1/15	4/11/17	Contig	SC	SAMEA3545429	GCA_001406155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/155/GCA_001406155.1_14207_7_89	-	2789STDY5834966
[Ruminococcus] gnavus	33038	PRJEB12317	324793	Terrabacteria group	Firmicutes	3.73807	42.9	-	FCFA01	241	3709	3246	6/8/16	4/12/17	Contig	IFR	SAMEA3727092	GCA_900036035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/035/GCA_900036035.1_RGNV35913	-	-
[Clostridium] symbiosum	1512	PRJEB9853	312810	Terrabacteria group	Firmicutes	5.3559	47.8	-	FIZZ01	52	5122	4383	2/20/16	4/12/17	Scaffold	WASHINGTON UNIVERSITY CENTER FOR GENOME SCIENCES	SAMEA3873034	GCA_900049235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/235/GCA_900049235.1_C.symbiosum_MappedAssembly	-	-
Dorea longicatena	88431	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.12661	41.5	-	CYYY01	42	3038	2857	10/1/15	4/4/17	Contig	SC	SAMEA3545274	GCA_001405135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/135/GCA_001405135.1_13414_6_50	-	2789STDY5608866
Bacteroides caccae	47678	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	5.33758	42.4	-	CZAI01	31	4472	4218	10/1/15	4/11/17	Contig	SC	SAMEA3545345	GCA_001405955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/955/GCA_001405955.1_14207_7_3	-	2789STDY5834880
Bacteroides ovatus CL02T12C04	997885	PRJNA64825	64825	FCB group	Bacteroidetes/Chlorobi group	7.90058	42.3	-	AGXT01	15	6453	6179	6/25/12	5/18/17	Scaffold	Broad Institute	SAMN02463928	GCA_000273195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/195/GCA_000273195.1_Bact_ovat_CL02T12C04_V1	-	CL02T12C04
[Clostridium] bolteae 90B7	997896	PRJNA64851	64851	Terrabacteria group	Firmicutes	6.43924	49.1	-	AGYF01	19	5933	5734	4/19/13	5/19/17	Scaffold	Broad Institute	SAMN02596756	GCA_000371665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/665/GCA_000371665.1_Clos_bolt_90B7_V1	-	90B7
Parabacteroides merdae	46503	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.99858	45.4	-	DCJU01	48	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453405	GCA_002319995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/995/GCA_002319995.1_ASM231999v1	28894102	-
Bacteroides uniformis	820	PRJNA243490	243490	FCB group	Bacteroidetes/Chlorobi group	4.65696	46.4	-	LTDC01	86	3999	3779	3/2/16	4/5/17	Scaffold	Washington University Genome Center	SAMN03842219	GCA_001578555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/555/GCA_001578555.1_ASM157855v1	-	KLE1607
Treponema denticola OTK	999434	PRJNA64919	64919	Spirochaetes	Spirochaetia	2.85753	37.7	chromosome:NZ_CM001797.1/CM001797.1	AGDY01	1	5443	5247	2/7/13	4/1/17	Chromosome	Broad Institute	SAMN02596724	GCA_000340705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/705/GCA_000340705.1_Trep_dent_OTK_V1	-	OTK
Lactobacillus delbrueckii subsp. lactis DSM 20072	888027	PRJNA398701	398701	Terrabacteria group	Firmicutes	2.16598	49	chromosome:NZ_CP022988.1/CP022988.1	-	1	2170	1821	8/30/17	9/1/17	Complete Genome	Korea University	SAMN07515627	GCA_002278095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/095/GCA_002278095.1_ASM227809v1	-	DSM 20072
Neisseria weaveri	28091	PRJEB6403	251923	Proteobacteria	Betaproteobacteria	2.1885	49	chromosome 1:NZ_LT571436.1/LT571436.1	-	1	2073	1970	5/17/16	4/12/17	Complete Genome	SC	SAMEA3174300	GCA_900086555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/555/GCA_900086555.1_34903_D01	-	NCTC13585
Mesorhizobium loti CJ3sym	1040982	PRJNA165305	165305	Proteobacteria	Alphaproteobacteria	7.56372	62.2	-	AXAL01	70	7413	6963	9/30/13	4/10/17	Scaffold	DOE Joint Genome Institute	SAMN02441449	GCA_000472785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/785/GCA_000472785.1_ASM47278v1	26380641	CJ3sym
Coprococcus eutactus	33043	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.23556	43.7	-	CYYJ01	24	2892	2761	10/1/15	4/11/17	Contig	SC	SAMEA3545251	GCA_001406175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/175/GCA_001406175.1_13414_6_27	-	2789STDY5608843
Azotobacter vinelandii	354	PRJEB17910	353817	Proteobacteria	Gammaproteobacteria	5.48453	65.5	-	FPKM01	171	5316	4967	11/17/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04244547	GCA_900119555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/555/GCA_900119555.1_IMG-taxon_2597490339_annotated_assembly	-	DSM 279
Yersinia aleksiciae	263819	PRJNA288628	288628	Proteobacteria	Gammaproteobacteria	4.00031	49	chromosome:NZ_CP011975.1/CP011975.1	-	1	3694	3490	7/8/15	4/10/17	Complete Genome	Friedrich-Loeffler-Institut	SAMN03801505	GCA_001047675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/675/GCA_001047675.1_ASM104767v1	26383649	159
Hafnia alvei FB1	1453496	PRJNA236111	236111	Proteobacteria	Gammaproteobacteria	4.71272	49	chromosome:NZ_CP009706.1/CP009706.1	-	1	4387	4170	10/28/14	4/2/17	Complete Genome	University of Malaya	SAMN02951885	GCA_000597785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/785/GCA_000597785.2_ASM59778v2	25075225	FB1
Nitrosomonas europaea	915	PRJNA274364	274364	Proteobacteria	Betaproteobacteria	2.61012	50.5	-	JZQZ01	343	2649	2614	2/24/16	4/19/16	Contig	Radboud University Nijmegen	SAMN03372522	GCA_001567435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/435/GCA_001567435.1_ASM156743v1	27029554	-
Acidithiobacillus ferrooxidans	920	PRJNA317193	317193	Proteobacteria	Acidithiobacillia	2.97667	56.8	-	LVXZ01	295	3186	2821	5/25/16	4/5/17	Contig	Central South University	SAMN04601195	GCA_001652185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/185/GCA_001652185.1_ASM165218v1	-	BY0502
Ruminococcus albus SY3	1341156	PRJNA206423	206423	Terrabacteria group	Firmicutes	4.28648	44.7	-	JEOB01	4	3844	3661	3/11/14	4/2/17	Scaffold	Weizmann Institute of Science	SAMN02951913	GCA_000586615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/615/GCA_000586615.1_RaSY3	-	SY3
Sediminispirochaeta smaragdinae DSM 11293	573413	PRJNA32637	32637	Spirochaetes	Spirochaetia	4.65397	49	chromosome:NC_014364.1/CP002116.1	-	1	4356	4273	7/29/10	9/3/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00017394	GCA_000143985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/143/985/GCA_000143985.1_ASM14398v1	21304743	DSM 11293
Tolumonas auensis DSM 9187	595494	PRJNA33873	33873	Proteobacteria	Gammaproteobacteria	3.47129	49	chromosome:NC_012691.1/CP001616.1	-	1	3275	3141	5/13/09	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598508	GCA_000023065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/065/GCA_000023065.1_ASM2306v1	22180815	DSM 9187
Candidatus Korarchaeum cryptofilum OPF8	374847	PRJNA16525	16525	TACK group	Candidatus Korarchaeota	1.59076	49	chromosome:NC_010482.1/CP000968.1	-	1	1706	1645	3/18/08	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598368	GCA_000019605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/605/GCA_000019605.1_ASM1960v1	18535141	-
Lactobacillus gasseri SJ-9E-US	575603	PRJNA42535	42535	Terrabacteria group	Firmicutes	1.78446	34.9	-	ADDU01	8	1743	1645	7/8/10	4/2/17	Scaffold	Broad Institute	SAMN02463838	GCA_000176995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/995/GCA_000176995.2_ASM17699v2	-	SJ-9E-US
Clostridium acetobutylicum	1488	PRJNA322795	322795	Terrabacteria group	Firmicutes	4.09122	30.7	-	LZYY01	55	3996	3877	2/23/17	2/25/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05170516	GCA_002006425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/425/GCA_002006425.1_ASM200642v1	-	DSM 1732
Methanothermobacter wolfeii	145261	PRJEB15255	357891	Euryarchaeota	Methanobacteria	1.68689	48.9	chromosome I:NZ_LT608329.1/LT608329.1	-	1	1778	1655	12/16/16	4/17/17	Complete Genome	CEBITEC	SAMEA4408318	GCA_900095815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/815/GCA_900095815.1_SIV6	-	-
Listeria innocua	1642	PRJNA276836	276836	Terrabacteria group	Firmicutes	2.91057	37.3	-	JZCU01	22	3003	2891	3/23/15	2/27/17	Scaffold	University of Veterinary Medicine Vienna	SAMN03381211	GCA_000960735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/735/GCA_000960735.1_ASM96073v1	-	12KSM
Paenibacillus swuensis	1178515	PRJNA272872	272872	Terrabacteria group	Firmicutes	5.0126	48.9	chromosome:NZ_CP011388.1/CP011388.1	-	1	4551	4363	5/16/16	4/12/17	Complete Genome	Seoul Women's University	SAMN03287568	GCA_001644605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/605/GCA_001644605.1_ASM164460v1	-	DY6
Archaeoglobus fulgidus	2234	PRJNA278302	278302	Euryarchaeota	Archaeoglobi	2.01782	48.6	-	LGEX01	153	2489	2489	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445123	GCA_001508815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/815/GCA_001508815.1_ASM150881v1	26787827	-
Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16	1618372	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.04989	48.9	chromosome:CP011210.1	-	1	1160	1113	6/19/15	9/21/17	Complete Genome	"Banfield Lab, University of California, Berkeley"	SAMN03319974	GCA_001029675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/675/GCA_001029675.1_ASM102967v1	-	-
Streptomyces avermitilis	33903	PRJNA361196	361196	Terrabacteria group	Actinobacteria	9.44687	70.7	-	MTJO01	79	8396	7458	3/3/17	3/6/17	Contig	Korea University	SAMN06209693	GCA_002017835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/835/GCA_002017835.1_ASM201783v1	-	MJM 7007
Sphaerochaeta globosa str. Buddy	158189	PRJNA47953	47953	Spirochaetes	Spirochaetia	3.31647	48.9	chromosome:NC_015152.1/CP002541.1	-	1	3107	3028	2/24/11	4/7/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713587	GCA_000190435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/435/GCA_000190435.1_ASM19043v1	-	Buddy
Candidatus Puniceispirillum marinum IMCC1322	488538	PRJNA28081	28081	Proteobacteria	Alphaproteobacteria	2.75353	48.9	chromosome:NC_014010.1/CP001751.1	-	1	2614	2568	3/31/10	4/17/17	Complete Genome	KORDI/Inha Univ	SAMN02603472	GCA_000024465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/465/GCA_000024465.1_ASM2446v1	20382761	IMCC1322
Cupriavidus metallidurans	119219	PRJNA217716	217716	Proteobacteria	Betaproteobacteria	7.13298	63.6	-	JFZF01	87	6659	6443	6/16/14	4/2/17	Contig	Belgian Nuclear Research Center (SCK-CEN)	SAMN02644839	GCA_000709065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/065/GCA_000709065.1_assembly_v1_of_C._metallidurans_NE12	25059868	NE12
Chlorobium phaeobacteroides BS1	331678	PRJNA12608	12608	FCB group	Bacteroidetes/Chlorobi group	2.7364	48.9	chromosome:NC_010831.1/CP001101.1	-	1	2586	2448	6/9/08	4/7/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598272	GCA_000020545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/545/GCA_000020545.1_ASM2054v1	-	BS1
Dehalococcoides mccartyi 195	243164	PRJNA214	214	Terrabacteria group	Chloroflexi	1.46972	48.9	chromosome:NC_002936.3/CP000027.1	-	1	1582	1497	10/3/01	8/28/17	Complete Genome	TIGR	SAMN02603990	GCA_000011905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/905/GCA_000011905.1_ASM1190v1	15637277	195
Anaplasma phagocytophilum str. Dog2	1184254	PRJNA163169	163169	Proteobacteria	Alphaproteobacteria	1.4733	41.6	chromosome:NC_021881.1/CP006618.1	-	1	1179	1069	7/24/13	4/1/17	Chromosome	University of Florida	SAMN02604173	GCA_000439795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/795/GCA_000439795.1_ASM43979v1	-	Dog2
Geobacillus thermodenitrificans NG80-2	420246	PRJNA18655	18655	Terrabacteria group	Firmicutes	3.60801	48.8513	chromosome:NC_009328.1/CP000557.1; plasmid pLW1071:NC_009329.1/CP000558.1	-	2	3649	3396	3/29/07	4/6/17	Complete Genome	"TEDA School of Biological Sciences and Biotechnology, Nankai University"	SAMN02603899	GCA_000015745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/745/GCA_000015745.1_ASM1574v1	17372208	NG80-2
Pectobacterium atrosepticum	29471	PRJNA258504	258504	Proteobacteria	Gammaproteobacteria	5.10459	50.9	-	JQHK01	60	4664	4454	9/8/14	4/2/17	Contig	Food and Environment Research Agency	SAMN02999423	GCA_000749905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/905/GCA_000749905.1_ASM74990v1	-	NCPPB 549
Salmonella bongori serovar 48:a:-	1967587	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.53686	51.1	-	MXLD01	47	4478	4171	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367832	GCA_002033765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/765/GCA_002033765.1_ASM203376v1	-	1308-83
Bacteroides thetaiotaomicron	818	PRJEB8679	282634	FCB group	Bacteroidetes/Chlorobi group	7.07646	43	-	CVOY01	175	5820	5432	5/6/15	4/3/17	Contig	WASHINGTON UNIVERSITY CENTER FOR GENOME SCIENCES	SAMEA3334961	GCA_001049535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/535/GCA_001049535.1_3731	-	-
Streptococcus uberis Ab71	1450186	PRJNA234018	234018	Terrabacteria group	Firmicutes	1.83805	36.4	-	JATK01	12	1829	1753	4/22/15	4/3/17	Contig	University of Nottingham	SAMN02570394	GCA_000975345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/975/345/GCA_000975345.1_ASM97534v1	25898893	Ab71
Bartonella quintana JK 12	1402975	PRJNA221533	221533	Proteobacteria	Alphaproteobacteria	1.58241	38.8	-	AZZY01	3	1385	1204	1/8/14	4/10/17	Scaffold	Broad Institute	SAMN02364134	GCA_000516815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/815/GCA_000516815.1_Bart_quin_JK_12_V1	-	JK 12
Rhodobacter capsulatus DE442	1415160	PRJNA225629	225629	Proteobacteria	Alphaproteobacteria	3.7605	66.6	-	AYPR01	40	3577	3443	12/10/13	4/2/17	Scaffold	University of British Columbia	SAMN02471349	GCA_000505785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/785/GCA_000505785.1_denovokmer150	24526637	DE442
Clostridium tetani	1513	PRJNA260192	260192	Terrabacteria group	Firmicutes	2.82902	28.5	-	JRGG01	35	2780	2682	10/2/14	4/2/17	Scaffold	"FDA, Center for Biologics Evaluation and Research"	SAMN03018573	GCA_000762335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/335/GCA_000762335.1_ASM76233v1	-	C2
Dehalococcoides mccartyi	61435	PRJDB4491	393801	Terrabacteria group	Chloroflexi	1.38778	48.8	chromosome:AP017649.1	-	1	1498	1448	7/8/17	7/8/17	Complete Genome	Tokyo university of agriculture and technology	SAMD00045709	GCA_002356375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/375/GCA_002356375.1_ASM235637v1	-	UCH-ATV1
Bartonella henselae JK 51	1402982	PRJNA221540	221540	Proteobacteria	Alphaproteobacteria	1.92686	38.3	-	AZZR01	7	1731	1511	1/8/14	4/10/17	Scaffold	Broad Institute	SAMN02364141	GCA_000516675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/675/GCA_000516675.1_Bart_hens_JK_51_V1	-	JK 51
Hafnia sp. CBA7124	1848580	PRJDB4840	321501	Proteobacteria	Gammaproteobacteria	4.5853	48.8	chromosome:AP017469.1	-	1	-	-	6/1/16	6/1/16	Complete Genome	Korea Basic Science Institute	SAMD00051861	GCA_002355555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/555/GCA_002355555.1_ASM235555v1	-	CBA7124
Geobacillus thermodenitrificans	33940	PRJNA377291	377291	Terrabacteria group	Firmicutes	3.75649	48.7932	chromosome:NZ_CP020030.1/CP020030.1; plasmid pGeo12a:NZ_CP020031.1/CP020031.1; plasmid pGeo12b:NZ_CP020032.1/CP020032.1	-	3	3788	3508	5/9/17	6/15/17	Complete Genome	Wageningen University & Research	SAMN06459234	GCA_002119625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/625/GCA_002119625.1_ASM211962v1	-	T12
Desulfobacterium autotrophicum HRM2	177437	PRJNA20931	20931	Proteobacteria	delta/epsilon subdivisions	5.65778	48.7174	chromosome:NC_012108.1/CP001087.1; plasmid pHRM2a:NC_012109.1/CP001088.1	-	2	4992	4835	2/18/09	5/18/17	Complete Genome	Goettingen Genomics Laboratory	SAMN02603282	GCA_000020365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/365/GCA_000020365.1_ASM2036v1	19187283	HRM2
Hafnia alvei	569	PRJNA319587	319587	Proteobacteria	Gammaproteobacteria	4.63044	48.7017	chromosome:NZ_CP015379.1/CP015379.1; plasmid unnamed:NZ_CP015380.1/CP015380.1	-	2	4277	4066	5/3/16	4/5/17	Complete Genome	IDIVAL Research Institute	SAMN04886742	GCA_001636255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/255/GCA_001636255.1_ASM163625v1	27313299	HUMV-5920
Janthinobacterium sp. B9-8	1236179	PRJNA277796	277796	Proteobacteria	Betaproteobacteria	4.72685	48.7	chromosome:NZ_CP014222.1/CP014222.1	-	1	4295	4116	2/2/16	4/11/17	Complete Genome	Nanjing Tech University	SAMN03396709	GCA_000969645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/645/GCA_000969645.2_ASM96964v2	-	B9-8
Dehalococcoides mccartyi CG4	1432060	PRJNA230429	230429	Terrabacteria group	Chloroflexi	1.38231	48.7	chromosome:NZ_CP006950.1/CP006950.1	-	1	1470	1401	8/4/14	4/3/17	Complete Genome	GIS/NUS	SAMN02444486	GCA_000830905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/905/GCA_000830905.1_ASM83090v1	25028492	CG4
Methylomicrobium alcaliphilum 20Z	1091494	PRJEA73721	73721	Proteobacteria	Gammaproteobacteria	4.79671	48.7	chromosome:NC_016112.1/FO082060.1; plasmid MEALZ_p:NC_016108.1/FO082061.1	-	2	4254	4022	10/14/11	4/17/17	Complete Genome	CEA/DSV/IG/Genoscope	SAMEA3283107	GCA_000968535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/535/GCA_000968535.1_ASM96853v1	22207753	20Z
[Bacillus] selenitireducens MLS10	439292	PRJNA13376	13376	Terrabacteria group	Firmicutes	3.59249	48.7	chromosome:NC_014219.1/CP001791.1	-	1	3386	3235	5/28/10	9/3/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000036	GCA_000093085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/093/085/GCA_000093085.1_ASM9308v1	-	MLS10
Chromobacterium violaceum	536	PRJNA277410	277410	Proteobacteria	Betaproteobacteria	4.76388	65	-	LDUU01	76	4440	4295	6/30/15	4/3/17	Contig	University of Malaya	SAMN03744444	GCA_001043735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/735/GCA_001043735.1_ASM104373v1	-	LK17
Brevibacterium linens BL2	321955	PRJNA405	405	Terrabacteria group	Actinobacteria	4.36697	62.8	-	AAGP01	76	4021	3796	4/7/05	5/18/17	Scaffold	DOE Joint Genome Institute	SAMN02441412	GCA_000167575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/575/GCA_000167575.1_ASM16757v1	-	BL2
Leifsonia xyli subsp. xyli	59736	PRJNA304278	304278	Terrabacteria group	Actinobacteria	2.54808	67.7	-	LNZG01	48	2521	2164	8/22/16	4/13/17	Contig	Guangdong Academy of Agricultural Sciences	SAMN04297299	GCA_001708285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/285/GCA_001708285.1_ASM170828v1	-	gdw1
Candidatus Planktophila sulfonica	1884904	PRJNA327031	327031	Terrabacteria group	Actinobacteria	1.34461	48.6	chromosome:NZ_CP016773.1/CP016773.1	-	1	1383	1335	9/8/17	10/2/17	Complete Genome	University of Zurich	SAMN05296523	GCA_002288065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/065/GCA_002288065.1_ASM228806v1	-	-
Porphyromonas gingivalis A7A1-28	1403338	PRJNA276132	276132	FCB group	Bacteroidetes/Chlorobi group	2.24902	48.6	chromosome:CP013131.1	-	1	1945	1841	11/17/15	11/17/15	Complete Genome	University of Florida	SAMN03653671	GCA_001444325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/325/GCA_001444325.1_ASM144432v1	-	A7A1-28
Staphylococcus haemolyticus DNF00585	1401071	PRJNA219669	219669	Terrabacteria group	Firmicutes	2.35741	32.5	-	JRNK01	49	2306	2181	9/26/14	3/24/17	Contig	J. Craig Venter Institute	SAMN02850970	GCA_000759125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/125/GCA_000759125.1_04_NF40_HMP2135v01	-	DNF00585
Photorhabdus luminescens NBAII H75HRPL105	1429883	PRJNA229907	229907	Proteobacteria	Gammaproteobacteria	5.24328	42.5	-	AZAB02	622	4451	4139	1/20/15	4/11/17	Contig	Washington State University	SAMN03288309	GCA_000826725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/725/GCA_000826725.2_ASM82672v2	26697329	NBAII H75HRPL105
Scardovia inopinata JCM 12537	1150468	PRJDB65	279565	Terrabacteria group	Actinobacteria	1.79786	48.6	chromosome Unknown:NZ_AP012334.1/AP012334.1	-	1	1510	1396	3/24/15	4/10/17	Complete Genome	"Graduate School of Frontier Sciences, University of Tokyo"	SAMD00061049	GCA_001042695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/695/GCA_001042695.1_ASM104269v1	25977411	JCM 12537
Brucella ovis IntaBari-2006-46-332	1293922	PRJNA189534	189534	Proteobacteria	Alphaproteobacteria	3.28939	57.2	-	AQII01	30	3410	3023	4/16/13	4/1/17	Contig	Broad Institute	SAMN01921155	GCA_000365885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/885/GCA_000365885.1_Bruc_ovis_IntaBari-2006-46-332_V1	-	IntaBari-2006-46-332
Crocosphaera watsonii WH 0402	1284629	PRJEB1317	252441	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.88036	37.7	-	CAQN01	1343	5670	4358	9/11/13	4/10/17	Contig	UCSC	SAMEA3146264	GCA_001039635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/635/GCA_001039635.1_WH0402_v1	-	WH 0402
Gynuella sunshinyii YC6258	1445510	PRJNA233633	233633	Proteobacteria	Gammaproteobacteria	6.47596	48.6	chromosome:NZ_CP007142.1/CP007142.1	-	1	5595	5253	3/4/15	4/10/17	Complete Genome	Gyeongsang National University	SAMN03379849	GCA_000940805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/805/GCA_000940805.1_ASM94080v1	-	YC6258
Archaeoglobus fulgidus DSM 4304	224325	PRJNA104	104	Euryarchaeota	Archaeoglobi	2.1784	48.6	chromosome:NC_000917.1/AE000782.1	-	1	2482	2369	12/17/97	4/6/17	Complete Genome	TIGR	SAMN02603985	GCA_000008665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/665/GCA_000008665.1_ASM866v1	9389475	DSM 4304
Methanothermobacter marburgensis str. Marburg	79929	PRJNA40103	40103	Euryarchaeota	Methanobacteria	1.63914	48.5913	chromosome:NC_014408.1/CP001710.1; plasmid pMTBMA4:NC_014409.1/CP001711.1	-	2	1771	1701	8/11/10	4/17/17	Complete Genome	Georg-August-University Goettingen	SAMN02603260	GCA_000145295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/295/GCA_000145295.1_ASM14529v1	20802048	Marburg
Nitrosomonas eutropha C91	335283	PRJNA13913	13913	Proteobacteria	Betaproteobacteria	2.78182	48.5544	chromosome:NC_008344.1/CP000450.1; plasmid Plasmid1:NC_008341.1/CP000451.1; plasmid Plasmid2:NC_008342.1/CP000452.1	-	3	2688	2484	9/13/06	4/10/17	Complete Genome	DOE Joint Genome Institute	SAMN02598323	GCA_000014765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/765/GCA_000014765.1_ASM1476v1	17991028	C91
Planococcus rifietoensis	200991	PRJNA305456	305456	Terrabacteria group	Firmicutes	3.50501	48.5	chromosome:NZ_CP013659.2/CP013659.2	-	1	3513	3400	12/14/15	4/16/17	Complete Genome	University of Malaya	SAMN04325379	GCA_001465795.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/465/795/GCA_001465795.2_ASM146579v2	-	M8
Candidatus Saccharimonas aalborgensis	1332188	PRJNA201542	201542	unclassified Bacteria	Bacteria candidate phyla	1.01378	48.5	chromosome:CP005957.1	-	1	1086	1034	5/14/13	1/30/14	Complete Genome	Aalborg University	SAMN02602963	GCA_000392435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/435/GCA_000392435.1_ASM39243v1	-	-
Erwinia amylovora LA635	1407062	PRJEB4664	231579	Proteobacteria	Gammaproteobacteria	3.79102	53.5592	chromosome I:NZ_CBVS010000001.1/CBVS010000001.1; chromosome II:NZ_CBVS010000002.1/CBVS010000002.1; chromosome III:NZ_CBVS010000003.1/CBVS010000003.1; chromosome IV:NZ_CBVS010000004.1/CBVS010000004.1; chromosome V:NZ_CBVS010000005.1/CBVS010000005.1; chromosome VI:NZ_CBVS010000006.1/CBVS010000006.1; chromosome VII:NZ_CBVS010000007.1/CBVS010000007.1; chromosome VIII:NZ_CBVS010000008.1/CBVS010000008.1; plasmid IX:NC_023055.1/HG793096.1	CBVS01	9	3561	3404	12/4/13	4/2/17	Chromosome	CeBiTec	SAMEA3138844	GCA_000513415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/415/GCA_000513415.1_EA_LA635	-	LA635
Roseburia hominis A2-183	585394	PRJNA33399	33399	Terrabacteria group	Firmicutes	3.59212	48.5	chromosome:NC_015977.1/CP003040.1	-	1	3362	3198	9/6/11	4/7/17	Complete Genome	University of Aberdeen	SAMN02604129	GCA_000225345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/345/GCA_000225345.1_ASM22534v1	26543119	A2-183
Streptomyces scabiei	1930	PRJNA309593	309593	Terrabacteria group	Actinobacteria	9.97875	71.3	-	LRQW01	1383	9341	8049	2/5/16	3/13/17	Contig	University of Florida	SAMN04437011	GCA_001550215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/550/215/GCA_001550215.1_ASM155021v1	-	85-08
Exiguobacterium sp. AT1b	360911	PRJNA27759	27759	Terrabacteria group	Firmicutes	2.99989	48.5	chromosome:NC_012673.1/CP001615.1	-	1	3107	3000	5/5/09	4/6/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598453	GCA_000023045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/045/GCA_000023045.1_ASM2304v1	21460088	AT1b
Syntrophomonas wolfei	863	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.18117	44.8	-	DHCR01	158	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456230	GCA_002398275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/275/GCA_002398275.1_ASM239827v1	28894102	-
Citrobacter koseri	545	PRJNA257374	257374	Proteobacteria	Gammaproteobacteria	4.88238	53.7	-	LSCU01	45	4779	4556	2/8/16	4/4/17	Scaffold	The Genome Institute at Washington University	SAMN03842473	GCA_001552875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/875/GCA_001552875.1_ASM155287v1	-	DNF00568
Nocardia farcinica	37329	PRJEB18836	360756	Terrabacteria group	Actinobacteria	6.40689	70.7	-	FTOW01	43	6042	5836	1/14/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421776	GCA_900156775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/775/GCA_900156775.1_IMG-taxon_2681813555_annotated_assembly	-	DSM 43257
[Eubacterium] eligens	39485	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.04716	37.2	-	MNSN01	24	1018	966	12/23/16	12/23/16	Scaffold	None	SAMN05717271	GCA_001916475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/475/GCA_001916475.1_ASM191647v1	27819664	-
Bacillus clausii	79880	PRJDB4609	314970	Terrabacteria group	Firmicutes	4.65934	44.3	-	BCXJ01	16	4595	4430	3/10/16	4/12/17	Contig	"Applied Microbiology, Faculty of Agriculture, Bioscience and Biotechnology, Kyushu University"	SAMD00048428	GCA_001598215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/215/GCA_001598215.1_ASM159821v1	27151792	AKU0647
Gluconobacter oxydans WSH-003	1131253	PRJNA80785	80785	Proteobacteria	Alphaproteobacteria	3.74903	56	-	AHKI01	50	3537	3266	5/17/12	3/30/17	Scaffold	Gluconobacter oxydans WSH-003	SAMN02470108	GCA_000263255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/255/GCA_000263255.1_GluOxy-1.0	22843589	WSH-003
Bacteroides vulgatus PC510	702446	PRJNA42763	42763	FCB group	Bacteroidetes/Chlorobi group	4.7817	42.4	-	ADKO01	117	4073	3860	4/8/10	5/18/17	Contig	J. Craig Venter Institute	SAMN00007490	GCA_000178195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/195/GCA_000178195.1_ASM17819v1	21622758	PC510
Agrobacterium vitis	373	PRJNA328315	328315	Proteobacteria	Alphaproteobacteria	5.95307	57.6	-	MBFB01	71	5447	5227	11/1/16	4/5/17	Contig	Monash University Malaysia	SAMN05369607	GCA_001860085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/085/GCA_001860085.1_ASM186008v1	-	Rr4
Xenorhabdus bovienii str. Jollieti	1379676	PRJEB4326	255483	Proteobacteria	Gammaproteobacteria	3.90998	44.5	-	CBTA01	239	3624	3285	7/17/14	4/2/17	Scaffold	UWM	SAMEA3139090	GCA_000736575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/575/GCA_000736575.1_XBJ2_3531_PRJEB4326	-	Jollieti
Wolinella succinogenes DSM 1740	273121	PRJNA445	445	Proteobacteria	delta/epsilon subdivisions	2.11036	48.5	chromosome:NC_005090.1/BX571656.1	-	1	2109	2040	9/4/03	4/7/17	Complete Genome	Max-Plank-Institute	SAMEA3138333	GCA_000196135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/135/GCA_000196135.1_ASM19613v1	14500908	DSMZ 1740
Xenorhabdus nematophila str. Anatoliense	1437825	PRJEB5089	270267	Proteobacteria	Gammaproteobacteria	6.70369	43.5	-	CCWM01	518	6348	6063	12/13/14	8/18/15	Contig	UW MADISON	SAMEA2267079	GCA_000820905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/905/GCA_000820905.1_XNA1	-	Anatoliense
Synechococcus sp. PCC 6312	195253	PRJNA158717	158717	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.7205	48.4881	chromosome:NC_019680.1/CP003558.1; plasmid pSYN6312.01:NC_019681.1/CP003559.1	-	2	3683	3528	12/4/12	4/17/17	Complete Genome	JGI	SAMN02261337	GCA_000316685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/685/GCA_000316685.1_ASM31668v1	-	PCC 6312
Listeria seeligeri FSL S4-171	702452	PRJNA42861	42861	Terrabacteria group	Firmicutes	2.97234	37.2514	chromosome:CM001052.1	ADXK01	1	6017	6008	12/6/10	11/19/13	Chromosome	Life Technologies Corporation	SAMN01909079	GCA_000183965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/965/GCA_000183965.1_ASM18396v1	21126366	FSL S4-171
Neisseria lactamica Y92-1009	869214	PRJEA50739	50739	Proteobacteria	Betaproteobacteria	2.02396	52.4	-	CACL01	44	2187	1927	9/20/10	3/30/17	Contig	"Health Protection Agency, Porton Down"	SAMEA2272069	GCA_000180595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/180/595/GCA_000180595.1_ASM18059v1	-	Y92-1009
Edwardsiella ictaluri	67780	PRJNA285852	285852	Proteobacteria	Gammaproteobacteria	3.70614	57.4	-	LEAL01	130	3457	2637	8/26/15	12/24/15	Scaffold	Louisiana state university	SAMN03761503	GCA_001277155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/155/GCA_001277155.1_ASM127715v1	26679579	LADL11-194
Paenalcaligenes hominis	643674	PRJNA362208	362208	Proteobacteria	Betaproteobacteria	2.6885	48.4	chromosome:NZ_CP019697.1/CP019697.1	-	1	2656	2115	2/21/17	2/23/17	Complete Genome	California Department of Public Health	SAMN06236385	GCA_002005365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/365/GCA_002005365.1_ASM200536v1	-	15S00501
Porphyromonas gingivalis 381	1403335	PRJNA276132	276132	FCB group	Bacteroidetes/Chlorobi group	2.37887	48.4	chromosome:NZ_CP012889.1/CP012889.1	-	1	2137	1968	10/14/15	4/4/17	Complete Genome	University of Florida	SAMN03656156	GCA_001314265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/265/GCA_001314265.1_ASM131426v1	-	381
Parabacteroides distasonis str. 3999B T(B) 6	1339345	PRJNA206131	206131	FCB group	Bacteroidetes/Chlorobi group	5.41709	45	-	JNHQ01	199	4849	4422	6/9/14	6/12/17	Contig	IGS	SAMN02370945	GCA_000699765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/765/GCA_000699765.1_ASM69976v1	-	3999B T(B) 6
Photobacterium angustum	661	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.85527	39.5	-	JZSZ01	57	4363	4041	3/10/15	4/3/17	Contig	FDA/CFSAN	SAMN03295470	GCA_000950085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/085/GCA_000950085.1_CFSAN029422_01.0	25931609	GCSL-A2-2
Bacillus weihenstephanensis FSL R5-860	1227359	PRJNA173846	173846	Terrabacteria group	Firmicutes	5.63305	35	-	ASPZ01	106	5966	5722	1/13/14	4/2/17	Contig	Cornell University	SAMN02597354	GCA_000518025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/025/GCA_000518025.1_ASM51802v1	24422886	FSL R5-860
Porphyromonas gingivalis ATCC 33277	431947	PRJDA19051	19051	FCB group	Bacteroidetes/Chlorobi group	2.35489	48.4	chromosome:NC_010729.1/AP009380.1	-	1	2118	1955	5/21/08	3/29/17	Complete Genome	Kitasato University	SAMD00060922	GCA_000010505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/505/GCA_000010505.1_ASM1050v1	18524787	ATCC 33277
Nitrosospira multiformis	1231	PRJEB17071	351148	Proteobacteria	Betaproteobacteria	3.1954	53.3	-	FOHI01	21	2957	2824	10/29/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216412	GCA_900111585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/585/GCA_900111585.1_IMG-taxon_2671180069_annotated_assembly	-	Nl7
Streptococcus sanguinis SK678	888819	PRJNA53179	53179	Terrabacteria group	Firmicutes	2.29872	43.3	-	AEXA01	4	2254	2182	3/1/11	3/30/17	Scaffold	Baylor College of Medicine	SAMN00253312	GCA_000191125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/125/GCA_000191125.1_ASM19112v1	-	SK678
Staphylococcus saprophyticus subsp. saprophyticus KACC 16562	1131257	PRJNA80651	80651	Terrabacteria group	Firmicutes	2.61994	33.1	-	AHKB01	58	2600	2404	3/7/12	3/30/17	Contig	Chunlab Inc.	SAMN02469603	GCA_000251125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/125/GCA_000251125.2_ASM25112v2	22843581	KACC 16562
Vibrio sp. 16	391586	PRJNA19395	19395	Proteobacteria	Gammaproteobacteria	4.53583	46.3	-	ACCV01	80	4196	3900	12/22/08	5/19/17	Scaffold	Gordon and Betty Moore Foundation Microbial Genome Sequencing Project	SAMN02436182	GCA_000158115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/115/GCA_000158115.1_ASM15811v1	-	16
Chlorobium phaeobacteroides DSM 266	290317	PRJNA12609	12609	FCB group	Bacteroidetes/Chlorobi group	3.1339	48.4	chromosome:NC_008639.1/CP000492.1	-	1	2902	2744	12/11/06	4/6/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598273	GCA_000015125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/125/GCA_000015125.1_ASM1512v1	-	DSM 266
Nitrosomonas eutropha	916	PRJEB17588	351957	Proteobacteria	Betaproteobacteria	2.34443	48.1	-	FPBL01	31	2250	2102	11/2/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216339	GCA_900116685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/685/GCA_900116685.1_IMG-taxon_2671180072_annotated_assembly	-	Nm24
Planococcus maritimus	192421	PRJNA371518	371518	Terrabacteria group	Firmicutes	4.14973	48.3595	chromosome:NZ_CP019640.1/CP019640.1; plasmid unnamed1:NZ_CP019641.1/CP019641.1; plasmid unnamed2:NZ_CP019642.1/CP019642.1; plasmid unnamed3:NZ_CP019643.1/CP019643.1	-	4	4155	3947	2/15/17	4/17/17	Complete Genome	"Northwest Institute of Eco-Environment and Resources,CAS"	SAMN06309415	GCA_001999905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/905/GCA_001999905.1_ASM199990v1	-	Y42
Leuconostoc gelidum subsp. gasicomitatum	115778	PRJEB12229	324803	Terrabacteria group	Firmicutes	2.08363	36.6	-	FBSX01	29	2073	1969	6/8/16	7/29/17	Scaffold	UNIVERSITY OF HELSINKI	SAMEA3718677	GCA_900016185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/185/GCA_900016185.1_ASM90001618v1	-	PB1a
Leuconostoc citreum	33964	PRJEB5535	262995	Terrabacteria group	Firmicutes	1.70622	39.2	-	CCNG01	17	1717	1598	10/8/14	4/2/17	Contig	LISBP	SAMEA2668125	GCA_000820965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/965/GCA_000820965.1_Assembly_1	-	-
Flavobacterium johnsoniae UW101	376686	PRJNA354433	354433	FCB group	Bacteroidetes/Chlorobi group	6.04181	34	-	MUGZ01	60	5213	5086	7/20/17	7/22/17	Scaffold	FDA	SAMN06049048	GCA_002221975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/975/GCA_002221975.1_ASM222197v1	-	ATCC 17061
Yersinia mollaretii	33060	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.65944	48.9	-	CTKJ01	49	4273	4076	3/26/15	4/3/17	Scaffold	SC	SAMEA859850	GCA_001218645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/645/GCA_001218645.1_4821_7_4	-	61/02
Yersinia intermedia	631	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.96506	47.5	-	CQCT01	55	4640	4406	3/23/15	4/3/17	Scaffold	SC	SAMEA859961	GCA_001104645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/645/GCA_001104645.1_4821_5_8	-	FCF335
Candidatus Planktophila versatilis	1884905	PRJNA327031	327031	Terrabacteria group	Actinobacteria	1.33101	48.3	chromosome:NZ_CP016774.1/CP016774.1	-	1	1380	1332	9/8/17	10/2/17	Complete Genome	University of Zurich	SAMN05296531	GCA_002288105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/105/GCA_002288105.1_ASM228810v1	-	-
Candidatus Planktophila versatilis	1884905	PRJNA327031	327031	Terrabacteria group	Actinobacteria	1.26698	48.3	chromosome:NZ_CP016781.1/CP016781.1	-	1	1310	1263	9/8/17	10/2/17	Complete Genome	University of Zurich	SAMN05296528	GCA_002288345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/345/GCA_002288345.1_ASM228834v1	-	-
Propionibacterium freudenreichii subsp. freudenreichii	66712	PRJEB4826	251921	Terrabacteria group	Actinobacteria	2.59131	67.3	-	CCBE01	59	2298	2176	6/18/14	4/2/17	Scaffold	INRA-MIG	SAMEA3139035	GCA_000723545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/545/GCA_000723545.1_CIRM129V1	-	ITG P20
Sinorhizobium medicae WSM244	1041150	PRJNA165339	165339	Proteobacteria	Alphaproteobacteria	6.65028	61.2	-	ATTR01	91	6572	6138	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02440912	GCA_000419785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/785/GCA_000419785.1_ASM41978v1	26664655	WSM244
Clostridium novyi A str. BKT29909	1443119	PRJNA233474	233474	Terrabacteria group	Firmicutes	2.46393	28.578	plasmid p1CnBKT29909:NZ_CM003328.1/CM003328.1	JENM01	95	2395	1925	6/20/14	4/3/17	Contig	National Veterinary Institute (SVA)	SAMN02593760	GCA_000724425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/425/GCA_000724425.2_BKT29909_1.0	25254374	BKT29909
Spirosoma aerolatum	1211326	PRJNA378888	378888	FCB group	Bacteroidetes/Chlorobi group	7.9596	48.3	chromosome:NZ_CP020104.1/CP020104.1	-	1	6640	6471	3/21/17	3/23/17	Complete Genome	Seoul Women's University	SAMN06554014	GCA_002056795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/795/GCA_002056795.1_ASM205679v1	-	KACC 17939
Streptococcus iniae KCTC 11634BP	1260129	PRJDB704	181972	Terrabacteria group	Firmicutes	2.06454	37	-	BANM01	113	1907	1814	11/29/12	4/5/17	Scaffold	Korea Research Institute of Bioscience and Biotechnology	SAMD00036648	GCA_000320965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/320/965/GCA_000320965.2_ASM32096v2	24201192	KCTC 11634BP
Porphyromonas gingivalis AJW4	1403336	PRJNA276132	276132	FCB group	Bacteroidetes/Chlorobi group	2.37249	48.3	chromosome:NZ_CP011996.1/CP011996.1	-	1	2108	1941	8/26/15	4/4/17	Complete Genome	University of Florida	SAMN03372093	GCA_001274615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/274/615/GCA_001274615.1_ASM127461v1	26543127	AJW4
Campylobacter concisus UNSW1	1242967	PRJNA177554	177554	Proteobacteria	delta/epsilon subdivisions	1.93713	39.5	-	ANNF01	72	1943	1859	9/13/13	4/1/17	Contig	The University of New South Wales	SAMN02471188	GCA_000466665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/665/GCA_000466665.1_UNSW1	23984967	UNSW1
Thermosipho melanesiensis	46541	PRJNA231770	231770	Thermotogae	Thermotogae	1.89007	31.2	-	JYCZ01	21	1962	1864	2/13/17	4/6/17	Scaffold	University of Oslo	SAMN03284849	GCA_001999585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/585/GCA_001999585.1_ASM199958v1	-	433
Porphyromonas gingivalis	837	PRJNA276132	276132	FCB group	Bacteroidetes/Chlorobi group	2.36703	48.3	chromosome:NZ_CP011995.1/CP011995.1	-	1	2114	1939	8/11/15	4/3/17	Complete Genome	University of Florida	SAMN03366764	GCA_001263815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/815/GCA_001263815.1_ASM126381v1	26404590	A7436
Pseudomonas mendocina DLHK	1197721	PRJNA168061	168061	Proteobacteria	Gammaproteobacteria	5.07209	64.7	-	ALKM01	33	4713	4531	8/13/12	5/19/17	Contig	The University of Hong Kong	SAMN02471181	GCA_000287395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/395/GCA_000287395.1_Pmen01	23105066	DLHK
Candidatus Nitrososphaera gargensis Ga9.2	1237085	PRJNA60505	60505	TACK group	Thaumarchaeota	2.83387	48.3	chromosome:CP002408.1	-	1	3602	3565	10/5/12	1/30/14	Complete Genome	Georg-August-University Goettingen	SAMN02603264	GCA_000303155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/155/GCA_000303155.1_ASM30315v1	-	-
Finegoldia magna BVS033A4	866773	PRJNA51069	51069	Terrabacteria group	Firmicutes	1.9952	31.7	-	AEDP01	50	1914	1830	8/10/10	3/30/17	Contig	J. Craig Venter Institute	SAMN00100737	GCA_000179695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/695/GCA_000179695.1_ASM17969v1	-	BVS033A4
Acholeplasma laidlawii	2148	PRJNA321821	321821	Terrabacteria group	Tenericutes	1.48614	31.9	-	LXYB01	15	1444	1379	6/28/17	6/30/17	Contig	Kazan Institute of Biochemistry and Biophysics KazSC RAS	SAMN05004555	GCA_002210205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/210/205/GCA_002210205.1_ASM221020v1	-	PG8R10
Caldanaerobacter subterraneus	911092	PRJNA278302	278302	Terrabacteria group	Firmicutes	1.27504	34	-	LGFN01	284	1492	1492	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445140	GCA_001508895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/895/GCA_001508895.1_ASM150889v1	26787827	-
Lysinibacillus sphaericus CBAM5	1400869	PRJNA219242	219242	Terrabacteria group	Firmicutes	5.15646	37.2	-	AYKQ01	58	5097	4793	2/13/14	4/2/17	Scaffold	Universidad de los Andes	SAMN02356577	GCA_000568835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/835/GCA_000568835.1_LsCBAM5	25685257	CBAM5
Porphyromonas gingivalis TDC60	1030843	PRJDA66755	66755	FCB group	Bacteroidetes/Chlorobi group	2.3399	48.3	chromosome:NC_015571.1/AP012203.1	-	1	2098	1942	5/24/11	3/30/17	Complete Genome	Tokyo Medical and Dental University	SAMD00060990	GCA_000270225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/225/GCA_000270225.1_ASM27022v1	21705612	TDC60
Porphyromonas gingivalis W83	242619	PRJNA48	48	FCB group	Bacteroidetes/Chlorobi group	2.34348	48.3	chromosome:NC_002950.2/AE015924.1	-	1	2094	1915	12/7/01	3/29/17	Complete Genome	Porphyromonas gingivalis Genome Project	SAMN02603720	GCA_000007585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/585/GCA_000007585.1_ASM758v1	12949112	W83
Akkermansia muciniphila	239935	PRJNA377666	377666	PVC group	Verrucomicrobia	2.73697	55.7	-	NFHJ01	10	2383	2316	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473757	GCA_002161325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/325/GCA_002161325.1_ASM216132v1	-	An78
Rhodococcus erythropolis	1833	PRJDB3086	259846	Terrabacteria group	Actinobacteria	7.02361	62.3	-	BBLL01	198	6608	6372	8/28/14	4/2/17	Scaffold	National Institute of Advanced Industrial Science and Technology	SAMD00019512	GCA_000747745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/745/GCA_000747745.1_ASM74774v1	25301659	JCM 6824
Candidatus Planktophila versatilis	1884905	PRJNA327031	327031	Terrabacteria group	Actinobacteria	1.32659	48.2	chromosome:NZ_CP016775.1/CP016775.1	-	1	1384	1335	9/8/17	10/2/17	Complete Genome	University of Zurich	SAMN05296521	GCA_002288145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/145/GCA_002288145.1_ASM228814v1	-	-
Candidatus Planktophila versatilis	1884905	PRJNA327031	327031	Terrabacteria group	Actinobacteria	1.32542	48.2	chromosome:NZ_CP016778.1/CP016778.1	-	1	1372	1322	9/8/17	10/2/17	Complete Genome	University of Zurich	SAMN05296525	GCA_002288265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/265/GCA_002288265.1_ASM228826v1	-	-
Prevotella ruminicola	839	PRJEB16110	348601	FCB group	Bacteroidetes/Chlorobi group	3.55574	47.8	-	FNXC01	11	2986	2878	10/27/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745192	GCA_900108375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/375/GCA_900108375.1_IMG-taxon_2596583684_annotated_assembly	-	ATCC 19189
Paracoccus denitrificans SD1	1051075	PRJNA68425	68425	Proteobacteria	Alphaproteobacteria	2.55727	64.6	-	AJFB01	4041	-	-	3/8/12	1/8/14	Contig	University of Hyderabad	SAMN02471795	GCA_000219825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/825/GCA_000219825.2_ParDenSD1_1.0	21914898	SD1
Geobacillus kaustophilus	1462	PRJNA260742	260742	Terrabacteria group	Firmicutes	3.68432	51.7	-	JYBP01	3	3798	3409	3/5/15	4/10/17	Contig	Los Alamos National Laboratory	SAMN03025780	GCA_000948285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/285/GCA_000948285.1_BFA_4_A	-	Et7/4
Hafnia alvei	569	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.51343	48.2	chromosome:NZ_CP014031.1/CP014031.1	-	1	4167	3778	2/11/16	8/8/17	Complete Genome	US Food and Drug Administration 	SAMN03996303	GCA_001559255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/255/GCA_001559255.1_ASM155925v1	-	FDAARGOS_158
Pseudoalteromonas haloplanktis	228	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.45237	39	-	DELW01	38	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06453899	GCA_002354595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/595/GCA_002354595.1_ASM235459v1	28894102	-
Arcobacter butzleri L352	1447260	PRJNA233527	233527	Proteobacteria	delta/epsilon subdivisions	2.23366	27	-	JAIT01	62	2261	2177	5/19/15	4/3/17	Contig	Agriculture and Agri-Foods Canada	SAMN02581420	GCA_001010675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/675/GCA_001010675.1_A.butzleri_L352_1.0	25947176	L352
Xanthomonas albilineans	29447	PRJNA270011	270011	Proteobacteria	Gammaproteobacteria	3.66795	63.1	-	JZIE01	2	3125	2877	3/25/15	4/3/17	Contig	CIRAD	SAMN03262508	GCA_000962945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/945/GCA_000962945.1_Xal-LKA070-G1	-	LKA070
Shewanella bicestrii	2018305	PRJNA393250	393250	Proteobacteria	Gammaproteobacteria	5.00441	48.1317	chromosome:NZ_CP022358.1/CP022358.1; plasmid pSHE-2:NZ_CP022360.1/CP022360.1; plasmid pSHE-CTX-M:NZ_CP022359.1/CP022359.1	-	3	4452	4244	7/12/17	7/14/17	Complete Genome	"Faculte de Medecine, Universite Paris-Sud"	SAMN07326684	GCA_002216875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/875/GCA_002216875.1_ASM221687v1	-	JAB-1
Sorangium cellulosum	56	PRJNA237845	237845	Proteobacteria	delta/epsilon subdivisions	13.7401	72.1	-	JEMD01	2566	10939	9169	3/11/16	3/11/16	Contig	Shandong University	SAMN02639850	GCA_001589295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/589/295/GCA_001589295.1_sce163.1	-	So0163
Kocuria rhizophila	72000	PRJNA286912	286912	Terrabacteria group	Actinobacteria	2.6981	70.8	-	LFIY01	183	2438	1852	6/23/15	4/10/17	Contig	Thompson Rivers University	SAMN03771694	GCA_001038535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/535/GCA_001038535.1_ASM103853v1	-	14ASP
Anoxybacillus flavithermus subsp. yunnanensis str. E13	1380408	PRJNA213809	213809	Terrabacteria group	Firmicutes	2.83839	41.6	-	AVGH01	24	2958	2515	9/10/14	4/2/17	Scaffold	Anhui University	SAMN02298030	GCA_000753835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/835/GCA_000753835.1_ASM75383v1	25197458	E13
Edwardsiella tarda	636	PRJNA329181	329181	Proteobacteria	Gammaproteobacteria	3.68479	57.1	-	MBLV01	35	3431	3265	8/5/16	4/5/17	Scaffold	Huazhong Agricultural University	SAMN05415001	GCA_001700615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/615/GCA_001700615.1_ASM170061v1	-	ASE201307
Escherichia albertii TW07627	502347	PRJNA28851	28851	Proteobacteria	Gammaproteobacteria	4.74659	49.9	-	ABKX01	43	4958	4305	3/3/08	3/5/17	Scaffold	J Craig Venter Institute	SAMN02436276	GCA_000155105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/105/GCA_000155105.1_ASM15510v1	-	TW07627
[Eubacterium] rectale	39491	PRJEB9320	298149	Terrabacteria group	Firmicutes	3.04514	41.8	-	CVRQ01	90	2955	2766	10/8/15	4/4/17	Contig	WTSI	SAMEA1710508	GCA_001406835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/835/GCA_001406835.1_T1815	-	T1-815
Brevibacillus brevis	1393	PRJNA378690	378690	Terrabacteria group	Firmicutes	6.12987	47.3	-	MXAR01	97	5878	5425	5/30/17	6/1/17	Contig	McMaster University	SAMN06556602	GCA_002161835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/835/GCA_002161835.1_ASM216183v1	-	ATCC 35690
Caldicellulosiruptor bescii	31899	PRJNA371183	371183	Terrabacteria group	Firmicutes	2.93757	35.2	-	NSHC01	2	2862	2605	9/13/17	9/15/17	Contig	DOE Joint Genome Institute	SAMN06297213	GCA_002300395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/395/GCA_002300395.1_ASM230039v1	-	RKCB126
Lachnoclostridium sp. YL32	1834196	PRJNA317592	317592	Terrabacteria group	Firmicutes	7.22534	48.1	chromosome:NZ_CP015399.2/CP015399.2	-	1	7190	6247	7/20/16	4/17/17	Complete Genome	University of Bern	SAMN04621618	GCA_001688665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/665/GCA_001688665.2_ASM168866v2	-	YL32
Yersinia ruckeri ATCC 29473	527005	PRJNA29769	29769	Proteobacteria	Gammaproteobacteria	3.73999	47.4	-	ACCC01	174	3378	3237	6/1/09	3/30/17	Contig	Naval Medical Research Center	SAMN00005359	GCA_000173755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/755/GCA_000173755.1_ASM17375v1	-	ATCC 29473
Borrelia hermsii YOR	1293576	PRJNA189058	189058	Spirochaetes	Spirochaetia	1.39461	29.9408	chromosome:NZ_CP004146.1/CP004146.1	-	71	1363	1120	1/27/14	4/2/17	Chromosome	"Rocky Mountain Labs, NIAID, NIH"	SAMN03081451	GCA_000568675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/675/GCA_000568675.1_ASM56867v1	-	YOR
Yersinia aldovae	29483	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	4.21586	47.7	-	CQAX01	60	3893	3647	3/23/15	4/10/17	Scaffold	SC	SAMEA1486374	GCA_001122605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/605/GCA_001122605.1_8016_2_88	-	IP07632
Yersinia rohdei	29485	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.29144	47	-	CTKU01	61	3904	3732	3/26/15	4/10/17	Scaffold	SC	SAMEA859848	GCA_001223385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/385/GCA_001223385.1_4821_7_2	-	56/02
Rhodococcus opacus M213	1129896	PRJNA158507	158507	Terrabacteria group	Actinobacteria	9.19416	67	-	AJYC02	483	8670	8010	5/30/12	5/19/17	Contig	University of Illinois at Chicago	SAMN02469789	GCA_000264745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/745/GCA_000264745.2_ASM26474v2	23409266	M213
Streptococcus equinus 2B	1410675	PRJNA223471	223471	Terrabacteria group	Firmicutes	1.91982	37.1	-	JNKQ01	9	1878	1805	6/11/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02841195	GCA_000702105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/105/GCA_000702105.1_ASM70210v1	-	2B
Variovorax paradoxus 4MFCol3.1	1150395	PRJNA178041	178041	Proteobacteria	Betaproteobacteria	7.01173	67.5	-	ARIP01	67	6589	6418	4/22/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02440458	GCA_000377585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/585/GCA_000377585.1_ASM37758v1	-	4MFCol3.1
Archaeoglobus fulgidus DSM 8774	1344584	PRJNA208006	208006	Euryarchaeota	Archaeoglobi	2.31629	48.1	chromosome:NZ_CP006577.1/CP006577.1	-	1	2616	2495	7/28/14	4/9/17	Complete Genome	University Bergen	SAMN03081472	GCA_000734035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/734/035/GCA_000734035.1_ASM73403v1	-	DSM 8774
Mycobacterium kansasii	1768	PRJNA374853	374853	Terrabacteria group	Actinobacteria	6.46245	66.1	chromosome:NZ_CP019885.1/CP019885.1	-	1	5827	5393	4/11/17	4/13/17	Chromosome	University of Lodz	SAMN06339044	GCA_002085775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/775/GCA_002085775.1_ASM208577v1	-	6MK
Teredinibacter turnerae T8412	1056819	PRJNA183359	183359	Proteobacteria	Gammaproteobacteria	5.14736	51.1	-	ARMH01	58	4272	4116	4/23/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02440988	GCA_000381665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/665/GCA_000381665.1_ASM38166v1	-	T8412
Brachyspira hyodysenteriae	159	PRJNA326554	326554	Spirochaetes	Spirochaetia	3.15862	27.7	-	MKXF01	446	2707	2561	4/14/17	4/22/17	Contig	Murdoch University	SAMN05284668	GCA_002100745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/745/GCA_002100745.1_ASM210074v1	27489956	JR3
Dickeya zeae NCPPB 2538	1223573	PRJNA172907	172907	Proteobacteria	Gammaproteobacteria	4.56379	53.6005	chromosome:NZ_CM001977.1/CM001977.1	AOOF01	7	4085	3919	6/4/13	4/1/17	Chromosome	James Hutton Institute	SAMN02470089	GCA_000406165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/165/GCA_000406165.1_DZE2538_1.0	24265502	NCPPB 2538
Lactobacillus crispatus MV-3A-US	575597	PRJNA38513	38513	Terrabacteria group	Firmicutes	2.43708	37.4	-	ACQC01	76	2388	2232	10/1/09	3/30/17	Scaffold	Broad Institute	SAMN02463743	GCA_000162315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/315/GCA_000162315.1_ASM16231v1	-	MV-3A-US
Fibrobacter succinogenes subsp. succinogenes S85	59374	PRJNA32617	32617	FCB group	Fibrobacteres	3.84264	48.1	chromosome:NC_013410.1/CP001792.1	-	1	3148	3069	10/15/09	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598491	GCA_000024665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/665/GCA_000024665.1_ASM2466v1	-	S85
Rothia mucilaginosa ATCC 25296	553201	PRJNA31405	31405	Terrabacteria group	Actinobacteria	2.25516	59.5	-	ACVO01	25	1782	1715	8/5/09	3/30/17	Contig	J. Craig Venter Institute	SAMN00001919	GCA_000175615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/615/GCA_000175615.1_ASM17561v1	-	ATCC 25296
Pelodictyon phaeoclathratiforme BU-1	324925	PRJNA13011	13011	FCB group	Bacteroidetes/Chlorobi group	3.01824	48.1	chromosome:NC_011060.1/CP001110.1	-	1	2929	2738	7/18/08	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598283	GCA_000020645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/645/GCA_000020645.1_ASM2064v1	-	BU-1
Candidatus Hodgkinia cicadicola	573658	PRJNA271702	271702	Proteobacteria	Alphaproteobacteria	1.11271	28.4058	chromosome variant1:CM003440.1; chromosome variant10:CM003449.1; chromosome variant11:CM003450.1; chromosome variant12:CM003451.1; chromosome variant13:CM003452.1; chromosome variant14:CM003453.1; chromosome variant15:CM003454.1; chromosome variant16:CM003455.1; chromosome variant17:CM003456.1; chromosome variant18:CM003457.1; chromosome variant19:CM003458.1; chromosome variant2:CM003441.1; chromosome variant20:CM003459.1; chromosome variant21:CM003460.1; chromosome variant22:CM003461.1; chromosome variant23:CM003462.1; chromosome variant24:CM003463.1; chromosome variant25:CM003464.1; chromosome variant26:CM003465.1; chromosome variant27:CM003466.1; chromosome variant3:CM003442.1; chromosome variant4:CM003443.1; chromosome variant5:CM003444.1; chromosome variant6:CM003445.1; chromosome variant7:CM003446.1; chromosome variant8:CM003447.1; chromosome variant9:CM003448.1	JYFR01	231	188	165	8/25/15	9/11/15	Chromosome	University of Montana	SAMN03327422	GCA_001273995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/995/GCA_001273995.1_ASM127399v1	26286984	-
Candidatus Planktophila dulcis	1884914	PRJNA327031	327031	Terrabacteria group	Actinobacteria	1.36593	48	chromosome:NZ_CP016772.1/CP016772.1	-	1	1405	1351	9/8/17	10/2/17	Complete Genome	University of Zurich	SAMN05296522	GCA_002288045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/045/GCA_002288045.1_ASM228804v1	-	-
Vulcanisaeta distributa JCM 11215	1295124	PRJDB829	243735	TACK group	Crenarchaeota	2.41589	45.8	-	BBCT01	29	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000515	GCA_001316145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/145/GCA_001316145.1_ASM131614v1	-	JCM 11215
Acidovorax delafieldii	47920	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	3.96384	63.1	-	DFQQ01	44	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452294	GCA_002377855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/855/GCA_002377855.1_ASM237785v1	28894102	-
Escherichia fergusonii	564	PRJNA254477	254477	Proteobacteria	Gammaproteobacteria	4.49466	50	-	JZWN02	29	4508	4265	4/3/15	2/25/17	Contig	Canadian Food Inspection Agency	SAMN03389646	GCA_000968895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/895/GCA_000968895.2_ASM96889v2	27081122	GTA-EF03
Candidatus Planktophila dulcis	1884914	PRJNA327031	327031	Terrabacteria group	Actinobacteria	1.34802	48	chromosome:NZ_CP016777.1/CP016777.1	-	1	1394	1341	9/8/17	10/2/17	Complete Genome	University of Zurich	SAMN05296532	GCA_002288225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/225/GCA_002288225.1_ASM228822v1	-	-
Streptomyces hygroscopicus subsp. hygroscopicus	68042	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.91923	72.1	-	JOIK01	369	8203	7505	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645505	GCA_000721535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/535/GCA_000721535.1_ASM72153v1	-	NRRL B-1477
Streptomyces viridochromogenes	1938	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.292	70.4	-	LGUR01	277	9200	8587	8/19/15	3/11/17	Contig	University of Illinois	SAMN02900584	GCA_001270495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/495/GCA_001270495.1_P009IDBA	-	NRRL 3413
Petrimonas mucosa	1642646	PRJEB15232	350442	FCB group	Bacteroidetes/Chlorobi group	3.71763	48	chromosome I:NZ_LT608328.1/LT608328.1	-	1	3000	2868	10/21/16	4/13/17	Complete Genome	CEBITEC	SAMEA4408017	GCA_900095795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/795/GCA_900095795.1_E5A	-	-
Aggregatibacter aphrophilus ATCC 33389	985008	PRJNA62995	62995	Proteobacteria	Gammaproteobacteria	2.26721	42.2	-	AEWB02	48	2196	2056	9/27/11	4/3/17	Contig	University of Southern California School of Dentistry	SAMN02471993	GCA_000226495.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/495/GCA_000226495.3_ASM22649v3	-	ATCC 33389
Acidithiobacillus caldus	33059	PRJNA325708	325708	Proteobacteria	Acidithiobacillia	3.16007	61	-	LZYF01	414	3210	2902	10/11/16	4/5/17	Contig	Central South University	SAMN05250859	GCA_001756725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/725/GCA_001756725.1_ASM175672v1	27999570	ZBY
Bacteroides finegoldii	338188	PRJNA321218	321218	FCB group	Bacteroidetes/Chlorobi group	2.99228	42.4	-	MNQP01	81	2299	2035	12/23/16	12/23/16	Scaffold	None	SAMN05717221	GCA_001915495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/495/GCA_001915495.1_ASM191549v1	27819664	-
Lactobacillus jensenii SJ-7A-US	575607	PRJNA38515	38515	Terrabacteria group	Firmicutes	1.72275	34.6	-	ACQD01	17	1662	1574	10/1/09	3/30/17	Scaffold	Broad Institute	SAMN02463744	GCA_000162335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/335/GCA_000162335.1_ASM16233v1	-	SJ-7A-US
Lactobacillus ruminis DPC 6832	1402208	PRJNA219505	219505	Terrabacteria group	Firmicutes	1.94393	43.1	-	AWYA01	128	1973	1735	12/31/14	4/2/17	Contig	Teagasc Food Research Centre	SAMN02358827	GCA_000813025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/025/GCA_000813025.1_ASM81302v1	25879663	DPC 6832
Bacteroides dorei CL02T12C06	997876	PRJNA64807	64807	FCB group	Bacteroidetes/Chlorobi group	6.06093	42.3	-	AGXJ01	21	5389	5034	6/25/12	5/18/17	Scaffold	Broad Institute	SAMN02463919	GCA_000273055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/055/GCA_000273055.1_Bact_dore_CL02T12C06_V1	-	CL02T12C06
Mobiluncus mulieris	2052	PRJNA231221	231221	Terrabacteria group	Actinobacteria	2.66115	55.1	-	NJFD01	5	2462	1407	6/23/17	6/23/17	Contig	US Food and Drug Administration 	SAMN06173316	GCA_002206485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/485/GCA_002206485.1_ASM220648v1	-	FDAARGOS_303
Acetomicrobium mobile DSM 13181	891968	PRJNA53351	53351	Synergistetes	Synergistia	2.1607	48	chromosome:NC_018024.1/CP003198.1	-	1	2087	2010	6/12/12	9/4/17	Complete Genome	JGI	SAMN02261375	GCA_000266925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/925/GCA_000266925.1_ASM26692v1	-	DSM 13181
Prevotella bivia DNF00188	1287476	PRJNA187523	187523	FCB group	Bacteroidetes/Chlorobi group	2.52702	39.9	-	JRNF01	158	2219	2077	9/26/14	4/2/17	Contig	JCVI	SAMN02850947	GCA_000759045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/045/GCA_000759045.1_04_NF_x40_HMP1651v01	-	DNF00188
Peptostreptococcus anaerobius 653-L	596329	PRJNA34105	34105	Terrabacteria group	Firmicutes	2.08309	35.9	-	ADJN01	73	1886	1790	2/18/10	3/30/17	Contig	J. Craig Venter Institute	SAMN00002160	GCA_000178095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/095/GCA_000178095.1_ASM17809v1	-	653-L
Atopobium vaginae DSM 15829	525256	PRJNA46677	46677	Terrabacteria group	Actinobacteria	1.4186	42.7	-	ADNA01	52	1217	1137	4/7/10	4/7/17	Scaffold	Stanford Genome Technology Center	SAMN02471011	GCA_000178335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/335/GCA_000178335.1_ASM17833v1	20418427	DSM 15829
Rothia dentocariosa	2047	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.47624	53.8	-	JVXS01	121	2150	2019	7/10/15	4/3/17	Contig	University of Washington	SAMN03197198	GCA_001062425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/425/GCA_001062425.1_ASM106242v1	26230489	1233_RDEN
Bifidobacterium angulatum DSM 20098 = JCM 7096	518635	PRJNA237576	237576	Terrabacteria group	Actinobacteria	1.99378	59.4	-	JDTY01	35	1623	1516	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442016	GCA_000771205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/205/GCA_000771205.1_DSM-20098	25658111	DSM 20098
Providencia alcalifaciens F90-2004	1256987	PRJNA181043	181043	Proteobacteria	Gammaproteobacteria	4.32682	41.8	-	JACS01	80	4171	3965	1/13/14	4/2/17	Contig	JCVI	SAMN02597449	GCA_000517805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/805/GCA_000517805.1_PalF902004v1.0	-	F90-2004
Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505	547043	PRJNA237576	237576	Terrabacteria group	Actinobacteria	2.28449	56.4	-	JDUK01	72	1877	1746	11/4/14	4/2/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442029	GCA_000771445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/445/GCA_000771445.1_DSM-20438	25658111	DSM 20438
Providencia rettgeri	587	PRJNA264579	264579	Proteobacteria	Gammaproteobacteria	4.99802	41	-	JSEQ01	80	4756	4528	12/19/14	4/2/17	Contig	IOC- FIOCRUZ	SAMN03135814	GCA_000805715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/715/GCA_000805715.1_Providencia_rettgeri_CCBH11880_NDM-1	-	CCBH11880
Bacteroides coprophilus	387090	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.19439	46.1	-	DBLY01	221	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453699	GCA_002298865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/865/GCA_002298865.1_ASM229886v1	28894102	-
Neisseria elongata subsp. glycolytica	88719	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	2.39841	53.8	-	JVHH01	77	2402	2193	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197625	GCA_001064935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/935/GCA_001064935.1_ASM106493v1	26230489	431_NMEN
Neisseria flavescens	484	PRJNA274665	274665	Proteobacteria	Betaproteobacteria	2.34502	48.8	-	LAEI01	73	2043	1994	4/8/16	4/8/16	Contig	university of milan	SAMN03329001	GCA_001618065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/065/GCA_001618065.1_ASM161806v1	-	CD-NF2
Neisseria sicca DS1	933267	PRJNA60863	60863	Proteobacteria	Betaproteobacteria	2.52135	51.5	-	AEPG01	455	-	-	12/29/10	1/7/15	Contig	"University of Maryland, College Park"	SAMN02471880	GCA_000193755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/755/GCA_000193755.2_ASM19375v2	-	DS1
Fibrobacter succinogenes subsp. succinogenes S85	59374	PRJNA47	47	FCB group	Fibrobacteres	3.843	48	chromosome:NC_017448.1/CP002158.1	-	1	3174	3086	8/6/10	4/7/17	Complete Genome	TIGR	SAMN02603971	GCA_000146505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/146/505/GCA_000146505.1_ASM14650v1	-	S85
Staphylococcus hominis subsp. hominis ZBW5	1185421	PRJNA163345	163345	Terrabacteria group	Firmicutes	2.3357	31.4	-	AKGC01	47	2338	2244	6/17/12	3/30/17	Contig	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN02471141	GCA_000269685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/685/GCA_000269685.1_Stahom1.0	22887665	ZBW5
Capnocytophaga sputigena	1019	PRJNA369395	369395	FCB group	Bacteroidetes/Chlorobi group	2.96395	38.6	-	NIBW01	2	2672	2547	9/19/17	9/21/17	Contig	Centers for Disease Control and Prevention	SAMN06289151	GCA_002312885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/885/GCA_002312885.1_ASM231288v1	-	H6490
Enterobacter cancerogenus	69218	PRJNA278239	278239	Proteobacteria	Gammaproteobacteria	4.88975	55.6	-	LDQI01	62	4737	4529	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401404	GCA_001475565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/565/GCA_001475565.1_ASM147556v1	26793183	NS188
Roseburia intestinalis	166486	PRJNA321218	321218	Terrabacteria group	Firmicutes	3.26683	42.7	-	MNTJ01	80	2884	2688	12/23/16	12/23/16	Scaffold	None	SAMN05717293	GCA_001916935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/935/GCA_001916935.1_ASM191693v1	27819664	-
Bacteroides cellulosilyticus WH2	1268240	PRJNA183545	183545	FCB group	Bacteroidetes/Chlorobi group	7.08213	42.7014	plasmid pBWH2A:NZ_ATFI01000024.1/ATFI01000024.1; plasmid pBWH2B:NZ_ATFI01000025.1/ATFI01000025.1	ATFI01	25	5453	5251	8/30/13	4/8/17	Contig	"Center for Genome Sciences and Systems Biology, Washington University in St. Louis"	SAMN02436915	GCA_000463315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/315/GCA_000463315.1_B_cell_WH2_1.0	23976882	WH2
Staphylococcus capitis SK14	553212	PRJNA31013	31013	Terrabacteria group	Firmicutes	2.43583	32.8	-	ACFR01	32	2371	2249	2/3/09	3/30/17	Contig	J. Craig Venter Institute	SAMN00000713	GCA_000174135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/135/GCA_000174135.1_ASM17413v1	-	SK14
Acinetobacter radioresistens WC-A-157	903900	PRJNA53399	53399	Proteobacteria	Gammaproteobacteria	3.2096	41.6745	plasmid pWCA157-53:NZ_ALIR01000021.1/ALIR01000021.1; plasmid pWCA157-6.5:NZ_ALIR01000020.1/ALIR01000020.1; plasmid pWCA157-7.5:NZ_ALIR01000018.1/ALIR01000018.1; plasmid pWCA157-71:NZ_ALIR01000019.1/ALIR01000019.1	ALIR01	21	3073	2880	8/10/12	3/30/17	Contig	Walter Reed Army Institute of Research	SAMN02436573	GCA_000286595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/595/GCA_000286595.1_gacin12v1.0	-	WC-A-157
Staphylococcus warneri Lyso 1 2011	1448849	PRJNA235867	235867	Terrabacteria group	Firmicutes	2.48959	32.7	-	JOPU01	52	2416	2318	6/27/14	4/2/17	Contig	IGS	SAMN02666775	GCA_000712915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/915/GCA_000712915.1_psalyso111	-	Lyso 1 2011
Eikenella corrodens	539	PRJNA310649	310649	Proteobacteria	Betaproteobacteria	2.42304	55.5	-	LXSG01	50	2452	2321	5/19/16	4/5/17	Contig	Public Health Agency of Canada	SAMN04931631	GCA_001648245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/245/GCA_001648245.1_ASM164824v1	-	NML04-0072
Corynebacterium striatum	43770	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.83018	59.3	-	JULV01	151	2638	2460	7/10/15	4/3/17	Contig	University of Washington	SAMN03198183	GCA_001059955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/955/GCA_001059955.1_ASM105995v1	26230489	963_CAUR
Corynebacterium aurimucosum	169292	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.41307	59.4	-	JUZU01	119	2315	2205	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197820	GCA_001057615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/615/GCA_001057615.1_ASM105761v1	26230489	620_CAUR
Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043	566552	PRJNA239843	239843	Terrabacteria group	Actinobacteria	2.08276	56.1	-	JGYT01	11	1755	1664	8/18/14	12/4/14	Contig	University of Parma	SAMN02673431	GCA_000741565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/565/GCA_000741565.1_Bifcat	"2,508,549,325,107,960"	LMG 11043
Hungatella hathewayi	154046	PRJEB10915	297013	Terrabacteria group	Firmicutes	6.9795	48.9	-	CYZE01	58	6186	5960	10/1/15	4/4/17	Contig	SC	SAMEA3545258	GCA_001405675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/675/GCA_001405675.1_13414_6_34	-	2789STDY5608850
Roseburia inulinivorans	360807	PRJNA321218	321218	Terrabacteria group	Firmicutes	2.31108	41.4	-	MNTK01	72	2110	1928	12/23/16	12/23/16	Scaffold	None	SAMN05717294	GCA_001916945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/945/GCA_001916945.1_ASM191694v1	27819664	-
Rhodococcus hoagii	43767	PRJNA306614	306614	Terrabacteria group	Actinobacteria	4.96893	68.8	-	LRRF01	279	4757	4427	5/18/16	6/6/17	Contig	Northumbria University	SAMN04357304	GCA_001646645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/646/645/GCA_001646645.1_ASM164664v1	-	DSM 20295
Helicobacter bilis	37372	PRJNA261711	261711	Proteobacteria	delta/epsilon subdivisions	2.40571	34.9	-	JRPH01	467	2298	1917	10/10/14	4/10/17	Scaffold	Massachusetts Institute of Technology	SAMN03075567	GCA_000765845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/845/GCA_000765845.1_ASM76584v1	-	Missouri
Lactobacillus iners LactinV 03V1-b	879298	PRJNA52035	52035	Terrabacteria group	Firmicutes	1.30396	32.7	-	AEHP01	67	1328	1024	10/5/10	3/30/17	Contig	J. Craig Venter Institute	SAMN00115037	GCA_000149105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/149/105/GCA_000149105.2_ASM14910v1	-	LactinV 03V1-b
Erysipelothrix rhusiopathiae ATCC 19414	525280	PRJNA31465	31465	Terrabacteria group	Firmicutes	1.74647	36.5	-	ACLK02	4	1700	1612	4/27/09	4/8/17	Contig	BCM	SAMN00189531	GCA_000160815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/815/GCA_000160815.2_ASM16081v2	-	ATCC 19414
Cardiobacterium hominis	2718	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	2.5651	59.4	-	JVAQ01	151	2481	2313	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197798	GCA_001063785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/785/GCA_001063785.1_ASM106378v1	26230489	599_SSED
Bacillus atrophaeus UCMB-5137	1239783	PRJNA176685	176685	Terrabacteria group	Firmicutes	4.06432	43.4	chromosome:NZ_CP011802.1/CP011802.1	-	1	4046	3815	6/11/15	4/3/17	Chromosome	University of Pretoria	SAMN02471930	GCA_000385965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/965/GCA_000385965.2_ASM38596v2	23788535	UCMB-5137
Vibrio cholerae LMA3984-4	935297	PRJNA61113	61113	Proteobacteria	Gammaproteobacteria	3.73872	47.9734	chromosome I:NC_017270.1/CP002555.1; chromosome II:NC_017269.1/CP002556.1	-	2	3529	3106	4/5/11	3/22/17	Complete Genome	Rede Paraense de Genômica e Proteômica	SAMN02603740	GCA_000195065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/065/GCA_000195065.1_ASM19506v1	21871929	LMA3984-4
Ruminococcus flavefaciens ND2009	1410672	PRJNA223442	223442	Terrabacteria group	Firmicutes	3.63669	48.1	-	JHXI01	33	3207	3077	4/8/14	4/11/17	Scaffold	DOE Joint Genome Institute	SAMN02744011	GCA_000621785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/785/GCA_000621785.1_ASM62178v1	-	ND2009
Acinetobacter nosocomialis NIPH 386	1217985	PRJNA183296	183296	Proteobacteria	Gammaproteobacteria	4.0467	38.8	-	APPP01	10	3962	3723	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN01828164	GCA_000368605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/605/GCA_000368605.1_Acin_noso_NIPH_386_V1	-	NIPH 386
Streptomyces griseus subsp. rhodochrous	285575	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.83695	72.7	-	JOFF01	142	6758	6462	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645257	GCA_000718235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/235/GCA_000718235.1_ASM71823v1	-	NRRL B-2932
Ochrobactrum intermedium	94625	PRJNA319130	319130	Proteobacteria	Alphaproteobacteria	4.70359	57.7	-	LXPU01	47	4565	4393	5/10/16	4/5/17	Contig	University of Florida	SAMN04943269	GCA_001641495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/495/GCA_001641495.1_ASM164149v1	-	KCJK1738
Streptococcus oralis ATCC 49296	888049	PRJNA53005	53005	Terrabacteria group	Firmicutes	2.06834	41.2	-	AEPO01	5	2026	1960	12/21/10	3/30/17	Scaffold	Baylor College of Medicine	SAMN00260261	GCA_000185265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/265/GCA_000185265.1_ASM18526v1	-	ATCC 49296
Shewanella sp. ANA-3	94122	PRJNA13905	13905	Proteobacteria	Gammaproteobacteria	5.25115	47.9725	chromosome 1:NC_008577.1/CP000469.1; plasmid Plasmid1:NC_008573.1/CP000470.1	-	2	4630	4421	11/8/06	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02598318	GCA_000203935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/203/935/GCA_000203935.1_ASM20393v1	-	ANA-3
Aerococcus viridans	1377	PRJNA379596	379596	Terrabacteria group	Firmicutes	1.30183	40.8	-	NCDD01	636	1481	1333	8/16/17	8/16/17	Scaffold	None	SAMN06622381	GCA_002280005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/005/GCA_002280005.1_ASM228000v1	-	-
Butyrivibrio fibrisolvens MD2001	1280703	PRJNA185728	185728	Terrabacteria group	Firmicutes	4.73896	39.7	-	AUKD01	66	3970	3791	7/10/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02440823	GCA_000424565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/565/GCA_000424565.1_ASM42456v1	-	MD2001
Megamonas hypermegale	158847	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.37301	43.2	-	DCFC01	55	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453771	GCA_002314325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/325/GCA_002314325.1_ASM231432v1	28894102	-
Bacteroides xylanisolvens	371601	PRJNA377666	377666	FCB group	Bacteroidetes/Chlorobi group	5.6928	41.6	-	NFLW01	105	4472	4299	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473580	GCA_002161115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/115/GCA_002161115.1_ASM216111v1	-	An109
Candidatus Liberibacter solanacearum	556287	PRJNA298929	298929	Proteobacteria	Alphaproteobacteria	1.28679	35.1	-	LLVZ01	26	1182	1083	10/26/15	4/17/17	Contig	USDA-ARS	SAMN04169026	GCA_001414235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/235/GCA_001414235.1_ASM141423v1	26679599	RSTM
Acidovorax citrulli	80869	PRJEB15996	348266	Proteobacteria	Betaproteobacteria	4.84827	68.9	-	FNEY01	71	4413	4167	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04489709	GCA_900100305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/305/GCA_900100305.1_IMG-taxon_2634166347_annotated_assembly	-	DSM 17060
Xanthomonas fuscans subsp. fuscans	366649	PRJNA400313	400313	Proteobacteria	Gammaproteobacteria	5.27908	64.8219	chromosome:NZ_CP023294.1/CP023294.1; plasmid pla:NZ_CP023295.1/CP023295.1; plasmid plc:NZ_CP023296.1/CP023296.1; plasmid plx:NZ_CP023297.1/CP023297.1	-	4	4817	4122	9/18/17	9/20/17	Chromosome	Universidade Federal de Pelotas	SAMN07563171	GCA_002309515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/515/GCA_002309515.1_ASM230951v1	-	Xap49
Pseudomonas syringae pv. delphinii	192088	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	6.14386	58.7	-	LJQH01	411	5767	5304	10/20/15	4/4/17	Scaffold	University of Toronto	SAMN03976282	GCA_001400335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/335/GCA_001400335.1_PdpICMP529	-	ICMP529
Pseudomonas savastanoi pv. nerii	360921	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.71546	58.3	-	LJQW01	341	5403	4874	10/20/15	4/4/17	Scaffold	University of Toronto	SAMN03976271	GCA_001400575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/575/GCA_001400575.1_PneICMP16943	-	ICMP16943
Pseudomonas coronafaciens pv. zizaniae	251700	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.72917	57.8	-	LJRT01	152	5320	5001	10/20/15	4/4/17	Scaffold	University of Toronto	SAMN03976248	GCA_001401235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/235/GCA_001401235.1_PziICMP8921	-	ICMP8921
Acinetobacter calcoaceticus NIPH 13	1217654	PRJNA183335	183335	Proteobacteria	Gammaproteobacteria	3.9285	38.7	-	APOE01	3	3806	3625	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN01828193	GCA_000367865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/865/GCA_000367865.1_Acin_calc_NIPH_13_V1	-	NIPH 13
Acinetobacter johnsonii TG19605	1221300	PRJNA172711	172711	Proteobacteria	Gammaproteobacteria	3.53249	41.3	-	AMJD01	186	3463	3293	10/2/12	3/30/17	Contig	Translational Genomics Research Institute	SAMN02471272	GCA_000301735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/735/GCA_000301735.1_ASM30173v1	-	TG19605
Acinetobacter junii CIP 64.5	1217664	PRJNA183286	183286	Proteobacteria	Gammaproteobacteria	3.35774	38.9	-	APPX01	7	3192	2939	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN01828161	GCA_000368765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/765/GCA_000368765.1_Acin_juni_CIP_64_5_V1	-	CIP 64.5
Pseudoalteromonas sp. SCSIO_11900	1461766	PRJNA238177	238177	Proteobacteria	Gammaproteobacteria	3.72843	40.5	-	JEMJ01	10	3467	3158	2/21/14	4/9/17	Scaffold	South China Sea Institute of Oceanology	SAMN02641977	GCA_000576475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/475/GCA_000576475.1_SOAPdenovo2.04	24744335	SCSIO_11900
Acinetobacter lwoffii NCTC 5866 = CIP 64.10 = NIPH 512	981327	PRJNA183263	183263	Proteobacteria	Gammaproteobacteria	3.21841	43.1	-	APQS01	16	3090	2894	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN01087831	GCA_000369105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/105/GCA_000369105.1_Acin_lwof_CIP_64_10_V1	-	CIP 64.10
Vibrio fluvialis 560	1315312	PRJNA196252	196252	Proteobacteria	Gammaproteobacteria	4.66293	50.1	-	JQHW01	152	4395	4041	9/15/14	4/2/17	Contig	Rede Paraense de genômica e proteômica	SAMN03002114	GCA_000754645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/645/GCA_000754645.1_VF560_1	25573928	560
Pantoea stewartii	66269	PRJNA263996	263996	Proteobacteria	Gammaproteobacteria	4.8217	53.9	-	JRWI01	56	4527	4352	11/23/14	4/2/17	Contig	University of Malaya	SAMN03112721	GCA_000786255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/255/GCA_000786255.1_ASM78625v1	25635007	M009
[Clostridium] innocuum	1522	PRJEB17461	351691	Terrabacteria group	Firmicutes	4.23207	43.6	-	FOTN01	56	4184	3987	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216507	GCA_900114575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/575/GCA_900114575.1_IMG-taxon_2654588128_annotated_assembly	-	NLAE-zl-C381
Cronobacter turicensis	413502	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.63632	57.3	-	MRZS01	140	4514	4245	2/13/17	4/17/17	Contig	FDA/CFSAN	SAMN06100262	GCA_001999505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/505/GCA_001999505.1_ASM199950v1	-	MOD1-Sh41g
Cylindrospermopsis raciborskii MVCC14	940191	PRJNA327088	327088	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.59452	40.1	-	MBQY01	99	3293	3062	11/1/16	4/13/17	Contig	Pontificia Universidad Catolica de Chile	SAMN05301168	GCA_001858125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/125/GCA_001858125.1_ASM185812v1	-	MVCC14
Methylophaga frappieri	754477	PRJNA84459	84459	Proteobacteria	Gammaproteobacteria	2.74529	47.9185	chromosome:NC_017856.1/CP003380.1; plasmid unnamed:NC_017858.1/CP003381.1	-	2	2658	2571	5/3/12	4/17/17	Complete Genome	INRS-Institut Armand-Frappier	SAMN02603343	GCA_000260965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/965/GCA_000260965.1_ASM26096v1	22815445	JAM7
Candidatus Planktophila dulcis	1884914	PRJNA327031	327031	Terrabacteria group	Actinobacteria	1.36178	47.9	chromosome:NZ_CP016770.1/CP016770.1	-	1	1410	1356	9/8/17	10/2/17	Complete Genome	University of Zurich	SAMN05296530	GCA_002287965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/965/GCA_002287965.1_ASM228796v1	-	-
Lactobacillus casei	1582	PRJNA340077	340077	Terrabacteria group	Firmicutes	3.13287	47.9	chromosome:NZ_CP017065.1/CP017065.1	-	1	3093	2893	6/13/17	6/15/17	Complete Genome	Korea Food Research Institute	SAMN05631198	GCA_002192215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/215/GCA_002192215.1_ASM219221v1	28439274	LC5
Vibrio mimicus VM573	671076	PRJNA40243	40243	Proteobacteria	Gammaproteobacteria	4.36655	46.1	-	ACYV01	74	4237	3813	9/15/09	5/19/17	Contig	LNCC / UFRJ	SAMN02470248	GCA_000175995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/995/GCA_000175995.1_ASM17599v1	19860885	VM573
Vibrio coralliilyticus	190893	PRJNA290178	290178	Proteobacteria	Gammaproteobacteria	5.68477	45.751	chromosome 2:NZ_CM004383.1/CM004383.1; plasmid unnamed:NZ_CM004384.1/CM004384.1	LGLS01	5	5207	5039	9/23/15	4/5/17	Chromosome	University of Rhode Island	SAMN03857122	GCA_001297935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/935/GCA_001297935.1_ASM129793v1	26634766	RE22
Prevotella timonensis S9-PR14	1401062	PRJNA219657	219657	FCB group	Bacteroidetes/Chlorobi group	3.2919	42.5	-	JRPQ01	279	2758	2542	10/2/14	4/9/17	Contig	J. Craig Venter Institute	SAMN02850958	GCA_000762405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/405/GCA_000762405.1_04_NF40_HMP9304v01	-	S9-PR14
Prevotella amnii DNF00058	1401066	PRJNA219662	219662	FCB group	Bacteroidetes/Chlorobi group	2.45025	36.4	-	JRNU01	179	2140	1984	9/26/14	4/9/17	Contig	J. Craig Venter Institute	SAMN02850963	GCA_000759315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/315/GCA_000759315.1_04_NF40_HMP9302v01	-	DNF00058
Parageobacillus thermoglucosidasius TNO-09.020	1136178	PRJNA81577	81577	Terrabacteria group	Firmicutes	3.74024	43.9	chromosome:NZ_CM001483.1/CM001483.1	AJJN01	1	7407	7004	4/5/12	4/10/17	Chromosome	CMBI	SAMN02471215	GCA_000258725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/725/GCA_000258725.1_ASM25872v1	22815439	TNO-09.020
Enterobacter asburiae	61645	PRJNA247592	247592	Proteobacteria	Gammaproteobacteria	4.62517	55.9	-	JUGH01	14	4523	4352	12/9/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02787124	GCA_000799205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/205/GCA_000799205.1_ASM79920v1	-	PDN3
Brucella sp. 83/13	520449	PRJNA33045	33045	Proteobacteria	Alphaproteobacteria	3.15385	57.1	-	ACBQ01	20	3112	2843	1/23/09	4/17/17	Scaffold	Broad Institute	SAMN02595285	GCA_000157875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/875/GCA_000157875.1_ASM15787v1	-	83/13
Pseudomonas amygdali pv. tabaci str. ATCC 11528	573066	PRJNA38647	38647	Proteobacteria	Gammaproteobacteria	6.21374	57.9	-	AEAP01	1064	5651	5022	7/8/10	5/19/17	Scaffold	University of North Carolina at Chapel Hill	SAMN02471315	GCA_000145945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/945/GCA_000145945.1_ASM14594v1	21799664	ATCC 11528
Xanthomonas euvesicatoria	456327	PRJNA275500	275500	Proteobacteria	Gammaproteobacteria	5.32061	64.5	-	JZRP01	103	4812	4395	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03349334	GCA_001009095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/095/GCA_001009095.1_ASM100909v1	-	683
Thermofilum uzonense	1550241	PRJNA262459	262459	TACK group	Crenarchaeota	1.61199	47.9	chromosome:NZ_CP009961.1/CP009961.1	-	1	1697	1641	5/7/15	2/21/17	Complete Genome	Immanuel Kant Baltic Federal University	SAMN03083278	GCA_000993805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/805/GCA_000993805.1_ASM99380v1	-	1807-2
Veillonella parvula ATCC 17745	686660	PRJNA41557	41557	Terrabacteria group	Firmicutes	2.16347	38.6	-	ADFU01	19	1998	1912	12/30/09	3/30/17	Contig	JCVI	SAMN00009759	GCA_000177435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/435/GCA_000177435.1_ASM17743v1	-	ATCC 17745
Cupriavidus necator NBRC 102504	1218105	PRJDB278	172101	Proteobacteria	Betaproteobacteria	6.91493	66.6	-	BCZN01	124	6419	6108	3/11/16	4/5/17	Contig	National Institute of Technology and Evaluation	SAMD00046896	GCA_001598755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/755/GCA_001598755.1_ASM159875v1	-	NBRC 102504
Bacillus cytotoxicus	580165	PRJNA394959	394959	Terrabacteria group	Firmicutes	4.1624	35.8	-	NOKG01	2	4340	3916	8/14/17	8/16/17	Contig	University of Zurich	SAMN07367959	GCA_002250945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/945/GCA_002250945.1_ASM225094v1	-	CH_13
Mesorhizobium ciceri WSM4083	1040981	PRJNA78191	78191	Proteobacteria	Alphaproteobacteria	6.84788	62.6	-	JAFG01	42	6735	6426	1/10/14	4/9/17	Scaffold	JGI	SAMN02584909	GCA_000519305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/305/GCA_000519305.1_ASM51930v1	-	WSM4083
Shewanella sp. MR-4	60480	PRJNA13904	13904	Proteobacteria	Gammaproteobacteria	4.70629	47.9	chromosome:NC_008321.1/CP000446.1	-	1	4128	3955	9/1/06	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02598317	GCA_000014685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/685/GCA_000014685.1_ASM1468v1	-	MR-4
Lactobacillus amylovorus DSM 16698	695563	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.00163	37.9	-	JQBQ01	162	1967	1786	11/6/15	4/11/17	Scaffold	Shanghai Majorbio	SAMN02797775	GCA_001437365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/365/GCA_001437365.1_ASM143736v1	26415554	DSM 16698
Haloquadratum walsbyi DSM 16790	362976	PRJNA17185	17185	Euryarchaeota	Halobacteria	3.17936	47.8971	chromosome:NC_008212.1/AM180088.1; plasmid PL47:NC_008213.1/AM180089.1	-	2	2875	2669	6/22/06	4/19/17	Complete Genome	Max Planck Institute	SAMEA3138195	GCA_000009185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/185/GCA_000009185.1_ASM918v1	16820047	DSM 16790 = HBSQ001
Streptococcus constellatus subsp. constellatus SK53	1095730	PRJDB76	219076	Terrabacteria group	Firmicutes	1.85562	37.9	-	BASU01	89	1842	1685	9/7/13	4/2/17	Contig	"Pediatric Dentistry, Tokyo Dental College"	SAMD00036759	GCA_000474075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/075/GCA_000474075.1_ASM47407v1	-	SK53
Turicibacter sanguinis	154288	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.66093	34.2	-	CZBN01	132	2500	2375	10/1/15	4/11/17	Contig	SC	SAMEA3545412	GCA_001406535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/535/GCA_001406535.1_14207_7_72	-	2789STDY5834949
Shewanella sp. MR-7	60481	PRJNA13903	13903	Proteobacteria	Gammaproteobacteria	4.79911	47.8935	chromosome:NC_008322.1/CP000444.1; plasmid Plasmid1:NC_008320.1/CP000445.1	-	2	4251	4069	9/1/06	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02598316	GCA_000014665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/665/GCA_000014665.1_ASM1466v1	-	MR-7
Lactobacillus casei subsp. casei ATCC 393	219334	PRJDB480	231330	Terrabacteria group	Firmicutes	2.95296	47.8636	chromosome:NZ_AP012544.1/AP012544.1; plasmid pLBCZ-1:NZ_AP012545.1/AP012545.1; plasmid pLBCZ-2:NZ_AP012546.1/AP012546.1	-	3	2979	2636	8/15/13	4/3/17	Complete Genome	Kyushu University	SAMD00061035	GCA_000829055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/055/GCA_000829055.1_ASM82905v1	24116025	ATCC 393
Candidatus Sulcia muelleri	336810	PRJNA341855	341855	FCB group	Bacteroidetes/Chlorobi group	0.235734	22.2	-	MIEN01	41	287	204	11/20/16	4/5/17	Contig	Cornell University	SAMN05729794	GCA_001884725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/725/GCA_001884725.1_ASM188472v1	-	Gra
Acinetobacter haemolyticus TG21157	1221299	PRJNA172710	172710	Proteobacteria	Gammaproteobacteria	3.32436	39.4	-	AMJC01	175	3219	2991	10/2/12	3/30/17	Contig	Translational Genomics Research Institute	SAMN02471289	GCA_000301715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/715/GCA_000301715.1_ASM30171v1	-	TG21157
Helicobacter suis HS1	710393	PRJEB15615	356155	Proteobacteria	delta/epsilon subdivisions	1.59032	40	-	FMSU01	93	1642	1499	12/4/16	4/6/17	Scaffold	GHENT UNIVERSITY	SAMEA4483168	GCA_900099075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/075/GCA_900099075.1_HS1_input_strain	-	-
Amycolatopsis mediterranei	33910	PRJNA244721	244721	Terrabacteria group	Actinobacteria	10.0128	71.3	-	JMQJ01	108	9359	9129	5/29/14	4/2/17	Contig	University of Delhi	SAMN02745598	GCA_000696405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/405/GCA_000696405.1_ASM69640v1	25081263	DSM 40773
Pantoea vagans	470934	PRJNA287868	287868	Proteobacteria	Gammaproteobacteria	4.729	55	-	LFQL01	92	4420	4239	8/5/15	4/10/17	Contig	University of Malaya	SAMN03793177	GCA_001238615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/615/GCA_001238615.1_ASM123861v1	-	ZBG6
Lysinibacillus fusiformis H1k	1416755	PRJNA226204	226204	Terrabacteria group	Firmicutes	4.81783	37.3	-	AYMK01	60	4742	4557	4/18/14	4/9/17	Contig	University of Malaya	SAMN02729845	GCA_000633275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/275/GCA_000633275.1_de_novo	-	H1k
Komagataeibacter hansenii	436	PRJNA343819	343819	Proteobacteria	Alphaproteobacteria	3.63267	59.6	-	MJMF01	124	3274	3051	1/6/17	4/6/17	Scaffold	University of Texas at Austin	SAMN05803662	GCA_001938745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/745/GCA_001938745.1_ASM193874v1	-	SC-3B
Candidatus Planktophila lacus	1884913	PRJNA327031	327031	Terrabacteria group	Actinobacteria	1.38481	47.8	chromosome:NZ_CP016780.1/CP016780.1	-	1	1418	1366	9/8/17	10/2/17	Complete Genome	University of Zurich	SAMN05296526	GCA_002288325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/325/GCA_002288325.1_ASM228832v1	-	-
Mycoplasma ovipneumoniae ATCC 29419	743968	PRJNA253514	253514	Terrabacteria group	Tenericutes	1.03848	29.5	-	JOTL01	100	775	673	8/26/16	4/5/17	Scaffold	Southwest University for Nationalities	SAMN02870894	GCA_001715085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/085/GCA_001715085.1_ASM171508v1	-	Y98
Candidatus Planktophila lacus	1884913	PRJNA327031	327031	Terrabacteria group	Actinobacteria	1.41011	47.8	chromosome:NZ_CP016783.1/CP016783.1	-	1	1442	1389	9/8/17	10/2/17	Complete Genome	University of Zurich	SAMN05296524	GCA_002288385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/385/GCA_002288385.1_ASM228838v1	-	-
Prevotella bryantii	77095	PRJEB16184	348934	FCB group	Bacteroidetes/Chlorobi group	3.29658	38.8	-	FNHC01	23	2696	2573	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487899	GCA_900103315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/315/GCA_900103315.1_IMG-taxon_2623620459_annotated_assembly	-	FB3001
Leptospira santarosai serovar Arenal str. MAVJ 401	1049976	PRJNA74071	74071	Spirochaetes	Spirochaetia	4.24566	41.6	-	AHMU02	87	4337	3852	1/24/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436499	GCA_000243835.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/835/GCA_000243835.3_gls454063v02	-	MAVJ 401
Oleiphilus messinensis	141451	PRJNA362330	362330	Proteobacteria	Gammaproteobacteria	6.37928	47.8	chromosome:NZ_CP021425.1/CP021425.1	-	1	5569	5418	5/31/17	6/2/17	Complete Genome	Immanuel Kant Baltic Federal University	SAMN06234459	GCA_002162375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/375/GCA_002162375.1_ASM216237v1	-	ME102
Brevundimonas diminuta 3F5N	1255603	PRJEB19169	374442	Proteobacteria	Alphaproteobacteria	3.2501	67	-	FUIE01	89	3208	3111	2/11/17	5/31/17	Contig	MICALIS	SAMEA80388418	GCA_900163625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/625/GCA_900163625.1_ASM90016362v1	-	3F5N
Vibrio cholerae	666	PRJNA188525	188525	Proteobacteria	Gammaproteobacteria	3.92836	47.8	chromosome:NZ_CP010811.1/CP010811.1	-	1	3724	3491	4/6/15	3/26/17	Complete Genome	Los Alamos National Laboratory	SAMN03248305	GCA_000969235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/235/GCA_000969235.1_ASM96923v1	25977434	1154-74
[Clostridium] clostridioforme 90A7	999407	PRJNA64865	64865	Terrabacteria group	Firmicutes	6.18037	49.2	-	AGYN01	8	5743	5520	4/19/13	5/19/17	Scaffold	Broad Institute	SAMN02596764	GCA_000371525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/525/GCA_000371525.1_Clos_clos_90A7_V1	-	90A7
Fusobacterium necrophorum BL	1441732	PRJNA232676	232676	Fusobacteria	Fusobacteriia	2.45842	34.1	-	JAAC01	235	2273	2085	5/15/14	4/2/17	Contig	"Newport Laboratories, A Sanofi Company"	SAMN02781279	GCA_000691645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/645/GCA_000691645.1_FnecBLv1.0	-	BL
Streptococcus parasanguinis	1318	PRJNA246621	246621	Terrabacteria group	Firmicutes	2.03966	42	-	JMRV01	79	1993	1907	7/8/14	4/2/17	Scaffold	University of Malaya	SAMN02768894	GCA_000724645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/645/GCA_000724645.1_ASM72464v1	26021924	C1A
Prevotella denticola DSM 20614 = JCM 13449	1122982	PRJNA195802	195802	FCB group	Bacteroidetes/Chlorobi group	3.05681	50.1	-	ATWK01	57	2570	2409	7/9/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440901	GCA_000421205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/205/GCA_000421205.1_ASM42120v1	-	DSM 20614
Pseudomonas fulva	47880	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.8526	61.5	-	DGLS01	54	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451053	GCA_002388605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/605/GCA_002388605.1_ASM238860v1	28894102	-
Capnocytophaga canimorsus	28188	PRJEB8039	270922	FCB group	Bacteroidetes/Chlorobi group	2.44482	36.2	-	CDOK01	249	2295	1694	1/20/15	4/10/17	Contig	"BIOZENTRUM, UNIVERSITY OF BASEL"	SAMEA3180108	GCA_000827575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/827/575/GCA_000827575.1_Cc11.1	-	Cc11
Agrobacterium sp. SUL3	1701910	PRJNA291341	291341	Proteobacteria	Alphaproteobacteria	6.01386	59.2	-	LGZB01	68	5895	5635	8/6/15	4/10/17	Scaffold	University of Exeter	SAMN03941713	GCA_001263295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/295/GCA_001263295.1_SUL3v1	26769927	SUL3
Haemophilus parainfluenzae ATCC 33392	888828	PRJNA66117	66117	Proteobacteria	Gammaproteobacteria	2.13608	39.3	-	AFQS01	19	2075	1908	8/28/14	4/2/17	Contig	J. Craig Venter Institute	SAMN00621707	GCA_000746485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/485/GCA_000746485.1_ASM74648v1	-	ATCC 33392
Rahnella aquatilis CIP 78.65 = ATCC 33071	745277	PRJNA65513	65513	Proteobacteria	Gammaproteobacteria	5.3846	52.1	-	JMPO01	190	5005	4725	7/28/14	4/9/17	Contig	UW-GEL	SAMN02743267	GCA_000735505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/505/GCA_000735505.1_GRAQ_DRAFTv1	-	ATCC 33071
Aerococcus urinae	1376	PRJNA379934	379934	Terrabacteria group	Firmicutes	1.94928	42.6	-	NARE01	20	1787	1704	4/12/17	4/16/17	Scaffold	Loyola University Chicago	SAMN06624124	GCA_002087935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/935/GCA_002087935.1_ASM208793v1	-	ATCC 51268
Veillonella atypica ACS-134-V-Col7a	866778	PRJNA51079	51079	Terrabacteria group	Firmicutes	2.15191	39	-	AEDS01	70	1950	1873	8/10/10	4/7/17	Contig	J. Craig Venter Institute	SAMN00100747	GCA_000179755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/755/GCA_000179755.1_ASM17975v1	-	ACS-134-V-Col7a
Streptococcus infantis ATCC 700779	889204	PRJNA158721	158721	Terrabacteria group	Firmicutes	1.85723	39	-	AJTA01	53	1962	1826	4/30/12	3/30/17	Contig	J. Craig Venter Institute	SAMN00761850	GCA_000260755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/755/GCA_000260755.1_SinfantisSK959v1.0	-	ATCC 700779
Actinomyces oris	544580	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.1137	68.5	-	MSGO01	95	2622	2414	1/3/17	4/6/17	Scaffold	King's College London	SAMN05898733	GCA_001929375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/375/GCA_001929375.1_ASM192937v1	-	S64C
Bacillus sp. OxB-1	98228	PRJDB1395	271740	Terrabacteria group	Firmicutes	3.59462	47.8	chromosome:NZ_AP013294.1/AP013294.1	-	1	3604	3438	1/6/15	4/17/17	Complete Genome	"Asano Active Enzyme Molecule Project, ERATO, JST, 5180 Kurokawa, Imizu, Toyama 939-0398, Japan"	SAMD00061012	GCA_000829195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/195/GCA_000829195.1_ASM82919v1	25720679	OxB-1
Vibrio cholerae	666	PRJNA338714	338714	Proteobacteria	Gammaproteobacteria	4.09573	47.7612	chromosome 1:NZ_CP016987.1/CP016987.1; chromosome 2:NZ_CP016988.1/CP016988.1	-	2	3927	3664	9/19/17	9/21/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN05567318	GCA_002313025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/025/GCA_002313025.1_ASM231302v1	-	FORC_055
Sinorhizobium fredii GR64	882101	PRJNA51881	51881	Proteobacteria	Alphaproteobacteria	7.143	62.0203	plasmid p64a:NC_015742.1/CP002245.1	AMCX01	217	6827	6309	9/18/12	5/19/17	Contig	Centro de Ciencias Genomicas. U.N.A.M.	SAMN02469447	GCA_000219415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/415/GCA_000219415.2_SfreGR64-1.0	23209231	GR64
Mycoplasma hominis ATCC 27545	1267000	PRJNA183041	183041	Terrabacteria group	Tenericutes	0.684158	26.8	-	ARQG01	22	616	553	4/26/13	4/1/17	Contig	DOE Joint Genome Institute	SAMN02440501	GCA_000385075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/075/GCA_000385075.1_ASM38507v1	-	LBD-4
Staphylococcus simulans UMC-CNS-990	1405498	PRJNA221573	221573	Terrabacteria group	Firmicutes	2.75518	35.8	-	AXDY01	40	2689	2542	10/21/13	4/9/17	Contig	University of Missouri - Columbia	SAMN02471901	GCA_000477455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/455/GCA_000477455.1_SSIM990	24336375	UMC-CNS-990
Myroides odoratimimus CCUG 3837	883153	PRJNA52187	52187	FCB group	Bacteroidetes/Chlorobi group	4.13654	34.4	-	AGZK01	4	3611	3459	9/17/12	5/19/17	Scaffold	Broad Institute	SAMN02596776	GCA_000297855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/855/GCA_000297855.1_Myro_odor_CCUG_3837_V1	-	CCUG 3837
Sphingobium yanoikuyae	13690	PRJNA241283	241283	Proteobacteria	Alphaproteobacteria	5.68379	63.9	-	JGVR01	116	5385	5160	7/21/14	4/2/17	Contig	Monash University Malaysia	SAMN02689080	GCA_000731935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/935/GCA_000731935.1_ASM73193v1	-	B1
Streptococcus parauberis KRS-02083	1207545	PRJNA170160	170160	Terrabacteria group	Firmicutes	2.17624	35.4	-	ALYM01	12	2234	2105	3/1/13	4/1/17	Contig	Gyeongsang National University	SAMN02469868	GCA_000343855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/855/GCA_000343855.1_Type1	24260382	KRS-02083
Pseudoxanthomonas suwonensis J42	935566	PRJNA202351	202351	Proteobacteria	Gammaproteobacteria	3.53077	70.5	-	AZUH01	60	3173	3063	1/3/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02597186	GCA_000526975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/975/GCA_000526975.1_ASM52697v1	-	J42
Leuconostoc lactis	1246	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.72439	42.9	-	MPLL01	47	1775	1601	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981500	GCA_002092595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/595/GCA_002092595.1_ASM209259v1	28217118	LN19
Kingella kingae BB114	1305780	PRJEB1632	194421	Proteobacteria	Betaproteobacteria	1.99202	46.7	-	CBRD01	1	1998	1729	8/15/13	4/1/17	Scaffold	URMITE	SAMEA2272120	GCA_000455465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/465/GCA_000455465.1_BB114	-	BB114
Acetobacter aceti 1023	1457393	PRJNA237021	237021	Proteobacteria	Alphaproteobacteria	3.0145	52.5	-	JEOA01	33	2890	2628	5/15/14	8/27/17	Scaffold	Purdue University	SAMN02614495	GCA_000691125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/125/GCA_000691125.1_Aaceti1023_1.0	24903876	1023
Streptococcus pseudopneumoniae 1321	1415760	PRJNA225870	225870	Terrabacteria group	Firmicutes	2.14656	39.9	-	AYRP01	103	2305	2005	12/11/13	4/2/17	Contig	"Research Institute of Physical-Chemical Medicine, Moscow, Russia"	SAMN02470847	GCA_000506705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/705/GCA_000506705.1_Spspn.str1321_v1.0	-	1321
Streptococcus cristatus	45634	PRJNA274768	274768	Terrabacteria group	Firmicutes	2.02654	42.7	-	JYGJ01	7	2027	1881	3/23/15	4/3/17	Contig	University at Buffalo	SAMN03334893	GCA_000959885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/885/GCA_000959885.1_ASM95988v1	25999552	CC5A
Yersinia pestis biovar Microtus str. 91001	229193	PRJNA10638	10638	Proteobacteria	Gammaproteobacteria	4.80322	47.7169	chromosome:NC_005810.1/AE017042.1; plasmid pCD1:NC_005813.1/AE017043.1; plasmid pCRY:NC_005814.1/AE017044.1; plasmid pMT1:NC_005815.1/AE017045.1; plasmid pPCP1:NC_005816.1/AE017046.1	-	5	4561	4318	3/15/04	4/10/17	Complete Genome	"Academy of Military Medical Sciences, The Institute of Microbiology and Epidemiology, China"	SAMN02602970	GCA_000007885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/885/GCA_000007885.1_ASM788v1	-	91001
Streptococcus vestibularis	1343	PRJNA320256	320256	Terrabacteria group	Firmicutes	1.88267	39.5	-	LXZX01	7	1925	1734	6/4/16	4/12/17	Scaffold	State University of Campinas	SAMN04931594	GCA_001657915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/915/GCA_001657915.1_ASM165791v1	-	22-06 S6
Vibrio cholerae	666	PRJNA245985	245985	Proteobacteria	Gammaproteobacteria	4.25802	47.7124	chromosome 1:NZ_CP007634.1/CP007634.1; chromosome 2:NZ_CP007635.1/CP007635.1; plasmid unnamed:NZ_CP007636.1/CP007636.1	-	3	4108	3907	10/10/14	3/24/17	Complete Genome	Centers for Disease Control and Prevention	SAMN02741837	GCA_000765415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/415/GCA_000765415.1_ASM76541v1	-	2012EL-2176
Xanthomonas perforans	442694	PRJNA276612	276612	Proteobacteria	Gammaproteobacteria	5.37987	64.6	-	JZVD01	113	4903	4547	5/18/15	4/3/17	Contig	Universidade de Sao Paulo	SAMN03378977	GCA_001009395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/395/GCA_001009395.1_v1	26089818	Xp9-5
Xanthomonas vesicatoria	56460	PRJNA266384	266384	Proteobacteria	Gammaproteobacteria	5.29752	64	-	JSXZ01	338	4720	4254	12/17/14	4/2/17	Contig	Institut de Recherche pour le Developpement	SAMN03164108	GCA_000803155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/155/GCA_000803155.1_XV_15b_E1.0	25676765	15b
Lactobacillus coryniformis subsp. coryniformis CECT 5711	1185325	PRJNA163365	163365	Terrabacteria group	Firmicutes	2.84294	42.8	-	AKFP01	203	2839	2639	7/30/12	4/7/17	Contig	Era7 Bioinformatics	SAMN02471360	GCA_000283115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/115/GCA_000283115.1_ASM28311v1	-	CECT 5711
Aeromonas caviae	648	PRJNA277314	277314	Proteobacteria	Gammaproteobacteria	4.47748	61.8	-	LAFH01	34	4154	3997	3/23/15	4/3/17	Contig	Universidade Federal do Parana 	SAMN03389335	GCA_000959705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/705/GCA_000959705.1_ASM95970v1	25999559	8LM
Streptobacillus moniliformis	34105	PRJNA319313	319313	Fusobacteria	Fusobacteriia	1.63183	26.3	-	LWTC01	210	1497	1389	6/4/16	4/5/17	Contig	Robert Koch Institute	SAMN04892742	GCA_001657815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/815/GCA_001657815.1_ASM165781v1	-	ATCC 49567
Yersinia pestis Antiqua	360102	PRJNA240103	240103	Proteobacteria	Gammaproteobacteria	4.8844	47.7029	chromosome:NZ_CP009906.1/CP009906.1; plasmid pCD:NZ_CP009905.1/CP009905.1; plasmid pMT:NZ_CP009904.1/CP009904.1; plasmid pPCP:NZ_CP009903.1/CP009903.1	-	4	4708	4355	2/9/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03174669	GCA_000834825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/825/GCA_000834825.1_ASM83482v1	25931590	Antiqua
Meiothermus ruber	277	PRJNA260561	260561	Terrabacteria group	Deinococcus-Thermus	3.02346	63.2	-	JRGA01	18	2993	2850	11/20/14	4/9/17	Scaffold	Jiangsu University	SAMN03024156	GCA_000785645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/645/GCA_000785645.1_LoxAfr3.0	-	TC-1
Leuconostoc pseudomesenteroides	33968	PRJNA352459	352459	Terrabacteria group	Firmicutes	2.06006	39.1	-	MPHR01	238	2221	1828	3/27/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981487	GCA_002072505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/505/GCA_002072505.1_ASM207250v1	28217118	LMGH100
Yersinia pestis Antiqua	360102	PRJNA16645	16645	Proteobacteria	Gammaproteobacteria	4.87984	47.7026	chromosome:NC_008150.1/CP000308.1; plasmid pCD:NC_008122.1/CP000311.1; plasmid pMT:NC_008120.1/CP000309.1; plasmid pPCP:NC_008121.1/CP000310.1	-	4	4696	4422	6/9/06	3/22/17	Complete Genome	DOE Joint Genome Institute	SAMN02598369	GCA_000013825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/825/GCA_000013825.1_ASM1382v1	16740952	Antiqua
Lactobacillus farciminis	1612	PRJNA284511	284511	Terrabacteria group	Firmicutes	2.43058	35.6981	chromosome:CP012177.1; plasmid unnamed:CP012178.1	-	2	2334	2196	7/30/15	9/23/15	Chromosome	university of caen lower normandy	SAMN03703094	GCA_001188635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/635/GCA_001188635.1_ASM118863v1	-	CNCM-I-3699-R
Acidithiobacillus ferrivorans	160808	PRJNA317458	317458	Proteobacteria	Acidithiobacillia	3.32048	56.6128	plasmid pAfPQ33_1:NZ_CP021414.1/CP021414.1; plasmid pAfPQ33_2:NZ_CP021415.1/CP021415.1	LVZL01	103	3382	3077	10/11/16	6/2/17	Contig	Universidad Nacional Mayor de San Marcos	SAMN04613415	GCA_001857665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/665/GCA_001857665.2_ASM185766v2	-	PQ33
Lactobacillus fructivorans KCTC 3543 = DSM 20203	941770	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.37237	38.9	-	AZDS01	16	1372	1303	11/6/15	4/11/17	Contig	Shanghai Majorbio	SAMN02369432	GCA_001434095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/095/GCA_001434095.1_ASM143409v1	26415554	DSM 20203
Xanthomonas gardneri	90270	PRJNA276592	276592	Proteobacteria	Gammaproteobacteria	5.33049	63.5	-	JZJV01	179	4671	4323	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03378955	GCA_001009295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/295/GCA_001009295.1_ASM100929v1	26089818	SM234-10
Yersinia pestis Z176003	637386	PRJNA36547	36547	Proteobacteria	Gammaproteobacteria	4.72579	47.7001	chromosome:NC_014029.1/CP001593.1; plasmid pCD1:NC_014017.1/CP001594.1; plasmid pMT1:NC_014022.1/CP001595.1; plasmid pPCP1:NC_014027.1/CP001596.1	-	4	4534	4324	4/8/10	3/22/17	Complete Genome	"State Key Laboratory for Infectious Disease Prevention and Control, Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02603873	GCA_000022845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/845/GCA_000022845.1_ASM2284v1	20453098	Z176003
Avibacterium paragallinarum	728	PRJNA232651	232651	Proteobacteria	Gammaproteobacteria	2.51445	40.9	-	LAEO01	24	2450	2306	4/6/15	4/10/17	Contig	BUAP-UNAM-CINVESTAV	SAMN03417482	GCA_000969315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/315/GCA_000969315.1_ASM96931v1	-	AVPG2015
Vibrio sinaloensis	379097	PRJNA271552	271552	Proteobacteria	Gammaproteobacteria	4.5995	46.1	-	JXBJ01	80	4266	4114	1/8/15	4/10/17	Contig	University of Malaya	SAMN03274905	GCA_000816475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/475/GCA_000816475.1_ASM81647v1	-	T47
Microbacterium testaceum	2033	PRJNA278181	278181	Terrabacteria group	Actinobacteria	3.91387	70	-	LDRV01	222	3664	3498	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401345	GCA_001476665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/665/GCA_001476665.1_ASM147666v1	26793183	RSA3
Chlamydia pecorum DBDeUG	1427370	PRJNA229199	229199	PVC group	Chlamydiae	1.1051	41.1503	chromosome:NZ_CM002308.1/CM002308.1	AZBB01	1	1992	1891	12/12/13	4/2/17	Chromosome	Queensland University of Technology	SAMN02470821	GCA_000508005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/005/GCA_000508005.1_CpecDBDeUG1.0	25106440	DBDeUG
Aeromonas veronii AER397	1073384	PRJNA71517	71517	Proteobacteria	Gammaproteobacteria	4.49666	58.8	-	AGWV01	5	4094	3941	9/17/12	5/18/17	Scaffold	Broad Institute	SAMN02463950	GCA_000297995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/995/GCA_000297995.1_Aero_vero_AER397_V1	-	AER397
Vibrio rotiferianus CAIM 577 = LMG 21460	1224743	PRJDB729	203006	Proteobacteria	Gammaproteobacteria	5.31623	44.7	-	BAOI01	318	4984	4717	5/14/13	4/8/17	Contig	University of Miyazaki	SAMD00036662	GCA_000400405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/405/GCA_000400405.1_ASM40040v1	23710045	CAIM 577 = LMG 21460
Burkholderia gladioli	28095	PRJNA244034	244034	Proteobacteria	Betaproteobacteria	9.31283	67.3	-	JPGG01	4	8217	7824	9/23/14	4/2/17	Scaffold	Los Alamos National Laboratory	SAMN02797591	GCA_000756855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/855/GCA_000756855.1_BGC	25414490	ATCC 25417
Mycobacterium abscessus subsp. bolletii	319705	PRJNA261046	261046	Terrabacteria group	Actinobacteria	4.92548	64.2	-	JRME01	214	5036	4757	10/19/16	3/20/17	Contig	Institut Pasteur	SAMN03068288	GCA_001792645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/645/GCA_001792645.1_ASM179264v1	26884275	137
Parabacteroides goldsteinii	328812	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.40349	44	-	DCJN01	66	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453402	GCA_002320525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/525/GCA_002320525.1_ASM232052v1	28894102	-
Leptospira weilii str. LNT 1234	1088541	PRJNA74087	74087	Spirochaetes	Spirochaetia	4.26362	40.8	-	AHNC02	83	4259	3897	1/24/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436426	GCA_000243995.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/995/GCA_000243995.3_gls454086v02	-	LNT 1234
Leptospira noguchii serovar Autumnalis str. ZUN142	1085540	PRJNA74169	74169	Spirochaetes	Spirochaetia	4.84409	35.5	-	AHOP02	68	4425	3924	1/24/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436382	GCA_000244775.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/775/GCA_000244775.3_gls454186v02	-	ZUN142
Pseudomonas brassicacearum	930166	PRJEB16280	348855	Proteobacteria	Gammaproteobacteria	6.77666	60.8	chromosome I:NZ_LT629713.1/LT629713.1	-	1	6129	5944	10/20/16	4/5/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04490180	GCA_900103245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/245/GCA_900103245.1_IMG-taxon_2639762602_annotated_assembly	-	BS3663
Leptospira licerasiae	447106	PRJNA374022	374022	Spirochaetes	Spirochaetia	4.25029	39.2	-	NFUQ01	29	4036	3943	5/19/17	5/24/17	Contig	Venezuelan Scientific Research Institute	SAMN06893648	GCA_002150045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/045/GCA_002150045.1_ASM215004v1	-	Bov1
Photobacterium leiognathi subsp. mandapamensis	48408	PRJNA278443	278443	Proteobacteria	Gammaproteobacteria	4.55278	41.2	-	LAFZ01	34	4115	3927	9/17/15	4/4/17	Contig	University of Oklahoma	SAMN03421179	GCA_001293185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/185/GCA_001293185.1_ASM129318v1	26350139	KNH6
Gallibacterium anatis	750	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.41875	40.1	-	JPXS01	89	2364	2233	11/4/14	4/2/17	Contig	University of Copenhagen	SAMN02900758	GCA_000771785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/785/GCA_000771785.1_ASM77178v1	-	20558/3kl.
Rickettsia amblyommatis str. Darkwater	1359166	PRJNA212472	212472	Proteobacteria	Alphaproteobacteria	1.43837	32.8	-	LAOH01	68	1711	1115	3/27/15	4/10/17	Contig	IGS	SAMN02666080	GCA_000964995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/995/GCA_000964995.1_ASM96499v1	-	Darkwater
Haemophilus haemolyticus	726	PRJNA282951	282951	Proteobacteria	Gammaproteobacteria	1.78581	38.4	-	LCTK01	40	1738	1618	5/15/15	4/3/17	Contig	University of Iowa	SAMN03580969	GCA_001008205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/205/GCA_001008205.1_ASM100820v1	-	11P18
Melissococcus plutonius	33970	PRJNA263538	263538	Terrabacteria group	Firmicutes	2.10114	31.1488	plasmid pMP43:NZ_CM003359.1/CM003359.1	JSAW01	6	1868	1664	7/7/15	4/3/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03103705	GCA_001047405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/405/GCA_001047405.1_ASM104740v1	-	B5
Lactobacillus kefiranofaciens	267818	PRJNA375758	375758	Terrabacteria group	Firmicutes	2.13384	37.4	-	NCWZ01	97	2133	1856	8/29/17	8/30/17	Contig	SysMilk	SAMN06718494	GCA_002276565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/565/GCA_002276565.1_ASM227656v1	-	KR
Streptococcus pasteurianus	197614	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.14013	37.3	-	JUYN01	86	2188	1986	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197853	GCA_001073755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/755/GCA_001073755.1_ASM107375v1	26230489	651_SPAS
Mycobacterium colombiense	339268	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.81302	67.3	-	LZJS01	185	5513	5244	6/17/16	4/10/17	Contig	JCVI	SAMN04634223	GCA_001667905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/905/GCA_001667905.1_ASM166790v1	-	E2464
Brevibacillus laterosporus	1465	PRJNA395357	395357	Terrabacteria group	Firmicutes	5.17274	40.3	-	NOLX01	150	4709	4351	8/18/17	8/21/17	Contig	The Ohio State University	SAMN07375960	GCA_002259955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/955/GCA_002259955.1_ASM225995v1	-	OSY-I1
Mycobacterium africanum	33894	PRJNA240158	240158	Terrabacteria group	Actinobacteria	4.3943	65.6	-	JKXR01	4	4253	4050	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02673325	GCA_000666065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/065/GCA_000666065.1_Myco_afri_MAL010084_V1	-	MAL010084
Pantoea agglomerans	549	PRJNA248051	248051	Proteobacteria	Gammaproteobacteria	5.00257	55.1	-	JNGC01	5	4719	4498	7/18/14	4/2/17	Scaffold	National Academy of Agricultural Science	SAMN02786245	GCA_000731125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/125/GCA_000731125.1_ASM73112v1	-	190
Mycobacterium canettii CIPT 140070008	1205675	PRJEB93	184401	Terrabacteria group	Actinobacteria	4.4202	65.5	chromosome:NC_019965.1/FO203508.1	-	1	4254	4002	12/19/12	5/19/17	Chromosome	Genoscope CEA	SAMEA2272599	GCA_000328845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/845/GCA_000328845.1_ASM32884v1	23291586	CIPT 140070008
Vibrio nigripulchritudo SO65	1238449	PRJEB562	222445	Proteobacteria	Gammaproteobacteria	6.36402	45.8	-	CAOE01	2	5726	5628	10/1/13	4/2/17	Scaffold	Genoscope CEA	SAMEA3139048	GCA_000723805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/805/GCA_000723805.1_ASP_PRJEB562_v1	23739050	SO65
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.85663	47.7	chromosome:NZ_CP017236.1/CP017236.1	-	1	3609	3404	6/13/17	6/15/17	Complete Genome	The University of Queensland	SAMN03287980	GCA_002192595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/595/GCA_002192595.1_ASM219259v1	28348835	QMA0440
Acetobacter tropicalis	104102	PRJNA288385	288385	Proteobacteria	Alphaproteobacteria	3.76963	55.6	-	LHZT01	132	3386	3180	3/7/16	4/12/17	Contig	Ghent University	SAMN03799291	GCA_001580945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/945/GCA_001580945.1_ASM158094v1	-	LMG 1663
Enterococcus hirae ATCC 9790	768486	PRJNA88835	88835	Terrabacteria group	Firmicutes	2.92351	36.9	-	AJAI01	14	2779	2595	5/3/13	4/1/17	Scaffold	Broad Institute	SAMN00809107	GCA_000393835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/835/GCA_000393835.1_Ente_hira_ATCC8043_V1	-	ATCC 9790
Hafnia alvei ATCC 13337	910996	PRJNA59557	59557	Proteobacteria	Gammaproteobacteria	4.82002	48.7	-	JMPK01	161	4480	4287	7/28/14	4/2/17	Contig	UW-GEL (University of Wisconsin - Genome Evolution Laboratory)	SAMN02743263	GCA_000735375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/375/GCA_000735375.1_GHAL_DRAFTv1	-	ATCC 13337
Selenomonas ruminantium AC2024	1392501	PRJNA217195	217195	Terrabacteria group	Firmicutes	2.83171	49.9	-	JIAC01	1	2619	2487	4/8/14	4/2/17	Contig	DOE Joint Genome Institute	SAMN02743908	GCA_000687995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/995/GCA_000687995.1_ASM68799v1	-	AC2024
Lactobacillus pentosus	1589	PRJNA287739	287739	Terrabacteria group	Firmicutes	3.71655	46.2	-	LFLY01	19	3444	3228	7/30/15	4/10/17	Scaffold	Huazhong Agriculture University	SAMN03785590	GCA_001188985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/985/GCA_001188985.1_ASM118898v1	-	FL0421
Oceanicoccus sagamiensis	716816	PRJNA355353	355353	Proteobacteria	Gammaproteobacteria	4.47208	47.7	chromosome:NZ_CP019343.1/CP019343.1	-	1	4052	3900	5/2/17	5/6/17	Complete Genome	"Atmosphere and Ocean Research Institute, The University of Tokyo"	SAMN06075352	GCA_002117105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/105/GCA_002117105.1_ASM211710v1	-	NBRC 107125
Lactobacillus acidipiscis	89059	PRJDB5682	384567	Terrabacteria group	Firmicutes	2.59455	39.3	-	BDQH01	327	2543	2126	4/26/17	5/6/17	Scaffold	"Institute of Livestock and Grassland Science, National Agriculture and Food Research Organization"	SAMD00078754	GCA_002117995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/995/GCA_002117995.1_ASM211799v1	-	JCM 10692
Staphylococcus sciuri	1296	PRJNA278418	278418	Terrabacteria group	Firmicutes	2.89678	32.5	-	LDTP01	155	2935	2814	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401358	GCA_001476575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/575/GCA_001476575.1_ASM147657v1	26793183	NS53
Agrobacterium rhizogenes	359	PRJNA247569	247569	Proteobacteria	Alphaproteobacteria	7.31892	59.9	-	JQJW01	44	7013	6786	8/28/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02787132	GCA_000745725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/725/GCA_000745725.1_ASM74572v1	-	YR147
Candidatus Xiphinematobacter sp. Idaho Grape	1704307	PRJNA293360	293360	PVC group	Verrucomicrobia	0.915884	47.7	chromosome:NZ_CP012665.1/CP012665.1	-	1	861	809	10/16/15	4/11/17	Complete Genome	Oregon State University	SAMN04001717	GCA_001318295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/295/GCA_001318295.1_ASM131829v1	26362082	Idaho Grape
Acidithiobacillus thiooxidans	930	PRJNA319312	319312	Proteobacteria	Acidithiobacillia	3.72088	53	-	LWSA01	351	4034	3639	8/16/16	4/5/17	Contig	Central South University	SAMN04884747	GCA_001705645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/645/GCA_001705645.1_ASM170564v1	27548157	A02
Morganella morganii	582	PRJNA291471	291471	Proteobacteria	Gammaproteobacteria	4.26782	50.5	-	LGYC01	74	4167	3990	8/10/15	4/3/17	Scaffold	National Institute of Health Dr Ricardo Jorge	SAMN03944814	GCA_001263435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/435/GCA_001263435.1_ASM126343v1	-	INSRALV892
Streptococcus sobrinus TCI-16	1074054	PRJNA71877	71877	Terrabacteria group	Firmicutes	2.06415	43.5	-	AGGD01	455	2148	1836	10/6/11	3/30/17	Contig	JCVI	SAMN02436615	GCA_000227825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/825/GCA_000227825.2_SMUT1-NEX_3-16	-	TCI-16
Cutibacterium avidum TM16	1292372	PRJNA189036	189036	Terrabacteria group	Actinobacteria	2.53972	63.4	-	AOUA01	420	2493	2129	9/3/13	4/1/17	Contig	Aarhus University	SAMN02393703	GCA_000463645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/645/GCA_000463645.1_TM16_assembly2012	24053623	TM16
Komagataeibacter europaeus 5P3	940285	PRJEA61329	61329	Proteobacteria	Alphaproteobacteria	3.98931	61.5	-	CADS01	256	3906	3436	2/21/11	4/7/17	Scaffold	Vital-IT - Swiss Institute of Bioinformatics	SAMEA2272389	GCA_000285335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/335/GCA_000285335.1_ASM28533v1	-	5P3
Synechocystis sp. PCC 6803	1148	PRJNA296927	296927	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.5692	47.7	chromosome:NZ_CP012832.1/CP012832.1	-	1	3320	3204	10/16/15	4/4/17	Complete Genome	South China University of Technology	SAMN04111259	GCA_001318385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/385/GCA_001318385.1_ASM131838v1	26473841	PCC 6803 substr. GT-G
Dickeya chrysanthemi	556	PRJNA265154	265154	Proteobacteria	Gammaproteobacteria	4.76788	54.3	-	JSYH01	144	4313	4103	11/17/14	4/9/17	Contig	University of Malaya	SAMN03145752	GCA_000784725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/725/GCA_000784725.1_ASM78472v1	-	L11
Vibrio cholerae	666	PRJNA188527	188527	Proteobacteria	Gammaproteobacteria	4.07746	47.7	chromosome:NZ_CP010812.1/CP010812.1	-	1	3892	3629	4/6/15	3/26/17	Complete Genome	Los Alamos National Laboratory	SAMN03248306	GCA_000969265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/265/GCA_000969265.1_ASM96926v1	25977434	10432-62
Tannerella forsythia	28112	PRJNA340021	340021	FCB group	Bacteroidetes/Chlorobi group	3.20194	47.3	-	MEHX01	79	2682	2530	1/6/17	6/12/17	Scaffold	University of Washington	SAMN05629351	GCA_001938785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/785/GCA_001938785.1_ASM193878v1	-	9610
Actinomyces naeslundii	1655	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.21894	67.6	-	MSKY01	49	2746	2564	1/5/17	4/6/17	Scaffold	King's College London	SAMN05898715	GCA_001937595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/595/GCA_001937595.1_ASM193759v1	-	W8-2-3
Yersinia aldovae 670-83	1453495	PRJNA236105	236105	Proteobacteria	Gammaproteobacteria	4.47109	47.7	chromosome:NZ_CP009781.1/CP009781.1	-	1	4145	3846	2/9/15	4/10/17	Complete Genome	Los Alamos National Laboratory	SAMN03144720	GCA_000834395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/395/GCA_000834395.1_ASM83439v1	25931590	670-83
Azospirillum brasilense FP2	1262469	PRJNA182105	182105	Proteobacteria	Alphaproteobacteria	6.88511	68.1	-	APHV01	413	6728	5755	5/31/13	4/8/17	Contig	Universidade Federal do Parana	SAMN02471304	GCA_000404045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/045/GCA_000404045.1_ASM40404v1	-	FP2
Rhizobium tropici	398	PRJNA247549	247549	Proteobacteria	Alphaproteobacteria	7.14155	61.1	-	JUHK01	30	6907	6649	12/9/14	4/10/17	Scaffold	DOE Joint Genome Institute	SAMN02787130	GCA_000800135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/135/GCA_000800135.1_ASM80013v1	-	CF286
Mycobacterium chelonae	1774	PRJNA347845	347845	Terrabacteria group	Actinobacteria	5.26768	64.1	-	MLII01	61	5179	4991	10/26/16	4/5/17	Contig	University of Georgia	SAMN05897990	GCA_001853585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/585/GCA_001853585.1_ASM185358v1	-	1557
Synechocystis sp. PCC 6803 substr. GT-I	1080228	PRJDA72559	72559	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.57	47.7	chromosome:NC_017038.1/AP012276.1	-	1	3315	3200	12/2/11	3/30/17	Complete Genome	"University of Tokyo, Department of Agriculture"	SAMD00061000	GCA_000284135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/135/GCA_000284135.1_ASM28413v1	22193367	-
Staphylococcus xylosus NJ	1262650	PRJNA182119	182119	Terrabacteria group	Firmicutes	2.93926	32.4	-	ANMR01	45	2773	2686	2/7/13	4/1/17	Contig	Zhejiang University	SAMN02472169	GCA_000338275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/338/275/GCA_000338275.1_StaXyl1.0	-	NJ
Pseudomonas pseudoalcaligenes AD6	1453503	PRJNA236303	236303	Proteobacteria	Gammaproteobacteria	5.39226	62.5	-	JFJN01	198	4987	4814	4/11/14	4/9/17	Contig	University of Minnesota	SAMN02673383	GCA_000626735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/735/GCA_000626735.1_Pseudomonas_mendocina_AD6	25035334	AD6
Synechocystis sp. PCC 6803 substr. PCC-N	1080229	PRJDA72561	72561	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.5701	47.7	chromosome:NC_017052.1/AP012277.1	-	1	3319	3202	12/2/11	3/30/17	Complete Genome	"University of Tokyo,  Department of Agriculture"	SAMD00061001	GCA_000284215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/215/GCA_000284215.1_ASM28421v1	22193367	-
Anaerostipes hadrus	649756	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.56265	36.8	-	CZAU01	80	3512	3316	10/1/15	4/4/17	Contig	SC	SAMEA3545371	GCA_001404835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/835/GCA_001404835.1_14207_7_31	-	2789STDY5834908
Flavonifractor plautii	292800	PRJEB10915	297013	Terrabacteria group	Firmicutes	4.11505	60.3	-	CZBD01	42	4048	3870	10/1/15	4/4/17	Contig	SC	SAMEA3545395	GCA_001406055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/055/GCA_001406055.1_14207_7_55	-	2789STDY5834932
Bacillus simplex NBRC 15720 = DSM 1321	1349754	PRJDB1338	231394	Terrabacteria group	Firmicutes	5.49008	39.8	-	BCVO01	106	5286	5089	2/27/16	4/5/17	Contig	National Institute of Technology and Evaluation	SAMD00046890	GCA_001591785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/785/GCA_001591785.1_ASM159178v1	-	NBRC 15720
Actinobacillus suis	716	PRJNA288596	288596	Proteobacteria	Gammaproteobacteria	2.4509	40.2	-	MTBW01	74	2331	2202	4/6/17	4/8/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN03817196	GCA_002081645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/645/GCA_002081645.1_ASM208164v1	-	H89-1173
Pseudomonas viridiflava	33069	PRJNA329466	329466	Proteobacteria	Gammaproteobacteria	5.96347	59.3	-	MBPF01	38	5403	5245	8/29/16	4/5/17	Scaffold	AIT Austrian Institute of Technology GmbH	SAMN05413107	GCA_001716855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/855/GCA_001716855.1_ASM171685v1	27795282	CDRTc14
Synechocystis sp. PCC 6803 substr. PCC-P	1080230	PRJDA72557	72557	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.57011	47.7	chromosome:NC_017039.1/AP012278.1	-	1	3320	3204	12/2/11	3/30/17	Complete Genome	"University of Tokyo , Department of Agriculture,"	SAMD00060999	GCA_000284455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/455/GCA_000284455.1_ASM28445v1	22193367	-
Leclercia adecarboxylata ATCC 23216 = NBRC 102595	911008	PRJDB15	77965	Proteobacteria	Gammaproteobacteria	4.97086	55.6	-	BCNP01	71	4817	4594	1/13/16	4/11/17	Contig	National Institute of Technology and Evaluation (NITE)	SAMD00018688	GCA_001515505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/505/GCA_001515505.1_ASM151550v1	-	NBRC 102595
Emticicia oligotrophica	312279	PRJEB19501	380479	FCB group	Bacteroidetes/Chlorobi group	0.335261	36.7	-	FXVG01	7	-	-	5/12/17	5/12/17	Scaffold	UNIVERSITY OF DELHI	SAMEA103916784	GCA_900177595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/595/GCA_900177595.1_Emticicia_sp._MM	-	-
Sulfobacillus thermosulfidooxidans	28034	PRJNA339394	339394	Terrabacteria group	Firmicutes	3.18048	48.5	-	MDZE01	24	3088	2982	1/17/17	5/8/17	Contig	Central South University	SAMN05590342	GCA_001953275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/275/GCA_001953275.1_ASM195327v1	-	ZBY
Acinetobacter ursingii	108980	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.16486	40.2	-	BBTT01	26	2965	2857	2/17/15	4/3/17	Contig	National Institute of Technology and Evaluation	SAMD00020356	GCA_000934145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/145/GCA_000934145.1_ASM93414v1	-	NBRC 110511
Raoultella planticola	575	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	6.1381	55.2	-	NPGL01	63	6087	5746	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07345014	GCA_002264145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/145/GCA_002264145.1_ASM226414v1	-	R3467
Neorhizobium galegae bv. officinalis	323656	PRJEB6976	282473	Proteobacteria	Alphaproteobacteria	6.28075	61.5	-	CCRH01	66	6054	5853	4/29/15	4/3/17	Contig	UH	SAMEA2698474	GCA_000985915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/915/GCA_000985915.1_NgalHAMBI1145Draft	-	-
Enterococcus durans ATCC 6056	1140001	PRJNA191889	191889	Terrabacteria group	Firmicutes	3.17057	37.8	-	ASWM01	10	3125	2898	5/31/13	4/8/17	Scaffold	Broad Institute	SAMN02596963	GCA_000407265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/265/GCA_000407265.1_Ente_dura_ATCC6056_V2	-	ATCC 6056
Campylobacter lanienae	75658	PRJNA341011	341011	Proteobacteria	delta/epsilon subdivisions	1.62518	34.4	-	MJJV01	67	1684	1592	5/15/17	9/19/17	Contig	USDA	SAMN05687031	GCA_002138635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/635/GCA_002138635.1_ASM213863v1	28854596	RM6997
Arcobacter cryaerophilus	28198	PRJNA307600	307600	Proteobacteria	delta/epsilon subdivisions	2.20916	27.3	-	LRUT01	88	2245	2138	2/25/16	4/11/17	Scaffold	Agriculture and Agri-Food Canada	SAMN04386090	GCA_001573005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/005/GCA_001573005.1_ASM157300v1	-	L400
Campylobacter sputorum biovar sputorum	32024	PRJNA247374	247374	Proteobacteria	delta/epsilon subdivisions	1.78058	29.1	-	JMTI01	51	1857	1743	12/2/14	4/9/17	Contig	Institut Pasteur Montevideo	SAMN02777050	GCA_000788295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/295/GCA_000788295.1_ASM78829v1	25193310	INTA08/209
Arcobacter thereius	544718	PRJNA283167	283167	Proteobacteria	delta/epsilon subdivisions	2.01222	26.8	-	LCUJ01	17	2048	1983	7/26/16	4/13/17	Scaffold	Ghent University	SAMN03609683	GCA_001695335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/335/GCA_001695335.1_ASM169533v1	-	DU22
Pseudomonas synxantha	47883	PRJNA339171	339171	Proteobacteria	Gammaproteobacteria	6.1174	59.8	-	MSDH01	45	5505	5312	3/7/17	3/11/17	Scaffold	USDA	SAMN05589719	GCA_002022245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/245/GCA_002022245.1_ASM202224v1	-	A342
Rhodococcus pyridinivorans JCM 10940 = NBRC 100608	1303690	PRJDB301	172269	Terrabacteria group	Actinobacteria	5.20591	67.9	-	BCXC01	41	4814	4566	12/6/16	4/6/17	Contig	National Institute of Technology and Evaluation	SAMD00046767	GCA_001894905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/905/GCA_001894905.1_ASM189490v1	-	NBRC 100608
Synechocystis sp. PCC 6803	1148	PRJDA67081	67081	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.5711	47.7	chromosome:NC_017277.1/AP012205.1	-	1	3315	3200	7/2/11	3/30/17	Complete Genome	"Graduate School of Arts and Sciences, University of Tokyo"	SAMD00060991	GCA_000270265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/265/GCA_000270265.1_ASM27026v1	"890,523,121,803,841"	GT-S
Rhodococcus ruber NBRC 15591	1219025	PRJDB304	172272	Terrabacteria group	Actinobacteria	5.33339	70.7	-	BCXE01	56	4879	4740	12/6/16	4/16/17	Contig	National Institute of Technology and Evaluation	SAMD00046777	GCA_001894945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/945/GCA_001894945.1_ASM189494v1	-	NBRC 15591
Oenococcus kitaharae	336988	PRJNA264401	264401	Terrabacteria group	Firmicutes	1.83904	42.8	-	JSAG01	27	1875	1781	10/5/16	4/13/17	Scaffold	Institut des Sciences de la Vigne et du Vin	SAMN03121841	GCA_001752545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/545/GCA_001752545.1_ASM175254v1	-	NRIC_0647
Leptospirillum ferriphilum	178606	PRJNA353739	353739	Nitrospirae	Nitrospira	2.3611	54.5	-	MPOJ01	30	2426	2324	2/16/17	5/8/17	Contig	Central South University	SAMN06019545	GCA_002002505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/505/GCA_002002505.1_ASM200250v1	-	DX
Rhodococcus fascians GIC26	1443899	PRJNA233522	233522	Terrabacteria group	Actinobacteria	5.33485	64.5	-	JMES01	49	4991	4831	9/30/14	4/2/17	Scaffold	Oregon State University	SAMN02569998	GCA_000760795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/795/GCA_000760795.1_R_fas_GIC26	-	GIC26
Enterococcus mundtii ATCC 882	1158598	PRJNA191908	191908	Terrabacteria group	Firmicutes	3.06559	38.4	-	ASWC01	2	2956	2743	5/31/13	4/1/17	Contig	Broad Institute	SAMN02596954	GCA_000407465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/465/GCA_000407465.1_Ente_mund_ATCC882_V2	-	ATCC 882
Carnobacterium maltaromaticum ATCC 35586	1087479	PRJNA73249	73249	Terrabacteria group	Firmicutes	3.54235	34.5	-	AGNS01	74	3433	3295	12/15/11	3/30/17	Contig	University of Copenhagen	SAMN02471708	GCA_000238575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/575/GCA_000238575.2_ASM23857v2	21704418	ATCC 35586
Prevotella ruminicola 23	264731	PRJNA10619	10619	FCB group	Bacteroidetes/Chlorobi group	3.61956	47.7	chromosome:NC_014033.1/CP002006.1	-	1	3037	2924	4/9/10	3/30/17	Complete Genome	TIGR	SAMN02604020	GCA_000025925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/925/GCA_000025925.1_ASM2592v1	20585943	Bryant 23
Paenibacillus peoriae	59893	PRJNA343020	343020	Terrabacteria group	Firmicutes	5.98681	45.6	-	MRTN01	90	5311	5112	1/18/17	4/6/17	Contig	Cornell University	SAMN05929618	GCA_001956155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/155/GCA_001956155.1_ASM195615v1	-	FSL J3-0120
Haloquadratum walsbyi C23	768065	PRJEA49335	49335	Euryarchaeota	Halobacteria	3.26048	47.6941	chromosome:NC_017459.1/FR746099.1; plasmid PL100:NC_017457.1/FR746100.1; plasmid PL6A:NC_017460.1/FR746101.1; plasmid PL6B:NC_017458.1/FR746102.1	-	4	2977	2771	5/31/11	4/10/17	Complete Genome	Max-Planck-Institute of Biochemistry	SAMEA2272799	GCA_000237865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/865/GCA_000237865.1_ASM23786v1	21701686	DSM 16854 = C23
Xanthomonas vasicola pv. vasculorum NCPPB 895	1184266	PRJNA163307	163307	Proteobacteria	Gammaproteobacteria	4.80381	63.2	-	AKBO01	1229	4565	3618	7/17/12	5/19/17	Scaffold	University of Exeter	SAMN02439007	GCA_000278075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/075/GCA_000278075.1_Xvv895v1	-	NCPPB 895
Leptospira kirschneri serovar Sokoine str. RM1	1049964	PRJNA74075	74075	Spirochaetes	Spirochaetia	4.4301	35.9	-	AHMW02	58	4001	3649	1/24/12	5/18/17	Contig	J. Craig Venter Institute	SAMN02436423	GCA_000243875.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/875/GCA_000243875.3_LkirsRM1v0.2	-	RM1
Leptospira alexanderi	100053	PRJNA257144	257144	Spirochaetes	Spirochaetia	4.06756	40.3	-	JQGT01	337	4001	3561	3/2/17	3/4/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947886	GCA_002009835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/835/GCA_002009835.1_ASM200983v1	-	56159
Salinispora pacifica CNS996	1169189	PRJNA175153	175153	Terrabacteria group	Actinobacteria	5.66128	69.6	-	ARGK01	113	5356	4917	4/19/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441021	GCA_000374745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/745/GCA_000374745.1_ASM37474v1	-	CNS996
Xanthomonas arboricola pv. corylina str. NCCB 100457	1306948	PRJNA193452	193452	Proteobacteria	Gammaproteobacteria	5.22658	65.5	-	APMC02	281	4596	4185	4/8/13	4/1/17	Contig	Colorado State University	SAMN02469645	GCA_000355635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/635/GCA_000355635.2_XanArbCorV02	23704178	NCCB 100457
Bartonella vinsonii subsp. berkhoffii ATCC 51672	1408318	PRJNA223130	223130	Proteobacteria	Alphaproteobacteria	1.78793	38.9	-	JACY01	64	1676	1457	1/10/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02585010	GCA_000518105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/105/GCA_000518105.1_ASM51810v1	-	ATCC 51672
Bartonella birtlesii E4	1202451	PRJNA169101	169101	Proteobacteria	Alphaproteobacteria	1.83708	37.9	-	ALVH01	9	1629	1460	5/17/13	4/8/17	Scaffold	URMITE	SAMN02472048	GCA_000400185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/185/GCA_000400185.1_ASM40018v1	23611908	E4
Pseudomonas psychrotolerans	237610	PRJNA278258	278258	Proteobacteria	Gammaproteobacteria	5.45537	64.7	-	LDSU01	197	4892	4723	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401423	GCA_001476435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/435/GCA_001476435.1_ASM147643v1	26793183	RSA46
Rhodococcus rhodochrous	1829	PRJNA238534	238534	Terrabacteria group	Actinobacteria	6.77732	61.7	-	JNWS01	85	6293	6074	7/1/14	4/2/17	Contig	University of Illinois	SAMN02645197	GCA_000716895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/895/GCA_000716895.1_ASM71689v1	-	NRRL B-1306
Gordonia polyisoprenivorans NBRC 16320 = JCM 10675	1077976	PRJDB945	254546	Terrabacteria group	Actinobacteria	4.97403	65.6	-	BBGD01	2876	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016917	GCA_001313585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/585/GCA_001313585.1_ASM131358v1	-	JCM 10675
Janthinobacterium lividum	29581	PRJNA327173	327173	Proteobacteria	Betaproteobacteria	5.16893	60.5	-	MAQB02	16	4715	3951	7/3/16	4/10/17	Contig	CSIR-Institute of Himalayan Bioresource Technology	SAMN05323684	GCA_001678745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/745/GCA_001678745.2_ASM167874v2	-	ERGS5:01
Wolbachia pipientis wVitA	1379786	PRJNA213627	213627	Proteobacteria	Alphaproteobacteria	1.21193	34.9	-	MUJM01	142	1150	1042	2/2/17	4/10/17	Contig	Indiana University	SAMN02263904	GCA_001983615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/615/GCA_001983615.1_ASM198361v1	27189996	wVitA
Yersinia pestis 3770	1345707	PRJNA208257	208257	Proteobacteria	Gammaproteobacteria	4.73567	47.6902	chromosome:NZ_CP006751.1/CP006751.1; plasmid pCD1:NZ_CP006750.1/CP006750.1; plasmid pMT1:NZ_CP006749.1/CP006749.1	-	3	4519	4240	7/30/15	3/26/17	Complete Genome	Los Alamos National Laboratory	SAMN03943654	GCA_001188775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/775/GCA_001188775.1_ASM118877v1	26383663	3770
Streptomyces acidiscabies	42234	PRJNA322221	322221	Terrabacteria group	Actinobacteria	10.9784	70.5	-	LYDU01	1073	10264	8994	1/10/17	3/14/17	Contig	University of Florida	SAMN05107165	GCA_001941285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/285/GCA_001941285.1_ASM194128v1	-	85-06
Mycoplasma canis UF33	1131453	PRJNA80797	80797	Terrabacteria group	Tenericutes	0.869506	27	-	AJFS01	5	681	623	4/17/12	3/30/17	Contig	University of Florida	SAMN02471771	GCA_000258965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/965/GCA_000258965.1_ASM25896v1	22815452	UF33
Pseudoalteromonas piscicida	43662	PRJNA242743	242743	Proteobacteria	Gammaproteobacteria	5.20336	43.3	-	JXXX01	205	4553	4405	4/1/15	4/10/17	Contig	Technical University of Denmark	SAMN03323934	GCA_000967575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/575/GCA_000967575.1_S2724	25879706	S2724
Citrobacter werkmanii	67827	PRJNA353891	353891	Proteobacteria	Gammaproteobacteria	5.22484	52	-	MRVL01	72	5149	4889	4/18/17	4/21/17	Scaffold	Aligarh Muslim University	SAMN06027862	GCA_002099305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/305/GCA_002099305.1_ASM209930v1	-	AK8
Pseudomonas monteilii	76759	PRJNA238164	238164	Proteobacteria	Gammaproteobacteria	5.72519	61.3	-	JENF01	126	5417	4950	4/21/14	4/2/17	Scaffold	85303	SAMN02641227	GCA_000633915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/915/GCA_000633915.1_SOAPdenovo_for_version_1.05_of_Pseudomonas_monteilii_genome	-	IOFA19
Pseudomonas oleovorans	301	PRJEB16811	350986	Proteobacteria	Gammaproteobacteria	4.78456	62.1	-	FNZC01	118	4663	4199	10/29/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216280	GCA_900109155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/155/GCA_900109155.1_IMG-taxon_2671180034_annotated_assembly	-	RS1
Yersinia pestis Pestoides G	649716	PRJNA240082	240082	Proteobacteria	Gammaproteobacteria	4.73814	47.6893	chromosome:NZ_CP010247.1/CP010247.1; plasmid pCD:NZ_CP010246.1/CP010246.1; plasmid pMT:NZ_CP010248.1/CP010248.1	-	3	4525	4247	2/9/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03202985	GCA_000834985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/985/GCA_000834985.1_ASM83498v1	25931590	Pestoides G
Pseudoalteromonas luteoviolacea S4054	1129367	PRJNA213496	213496	Proteobacteria	Gammaproteobacteria	6.05986	41.6	-	AUXW01	219	5036	4868	4/21/15	4/3/17	Contig	Technical University of Denmark	SAMN02250941	GCA_000974945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/945/GCA_000974945.1_S4054_1.0	25879706	S4054
Cronobacter malonaticus ENBT0334	1128983	PRJNA80545	80545	Proteobacteria	Gammaproteobacteria	4.47411	57	-	JXTD01	128	4297	3951	2/20/15	4/3/17	Contig	FDA	SAMN01814043	GCA_000878475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/475/GCA_000878475.1_CFSAN001453_01.0	-	ENBT0334
Lactobacillus mucosae DSM 13345	1423771	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.25429	46.4	-	AZEQ01	91	2040	1948	11/6/15	4/4/17	Contig	Shanghai Majorbio	SAMN02369406	GCA_001436025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/025/GCA_001436025.1_ASM143602v1	26415554	DSM 13345
Yersinia pestis 8787	1345708	PRJNA208258	208258	Proteobacteria	Gammaproteobacteria	4.67599	47.6876	chromosome:NZ_CP006748.1/CP006748.1; plasmid pCD1:NZ_CP006747.1/CP006747.1; plasmid pMT1:NZ_CP006746.1/CP006746.1	-	3	4463	4170	7/30/15	3/26/17	Complete Genome	Los Alamos National Laboratory	SAMN03943569	GCA_001188755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/755/GCA_001188755.1_ASM118875v1	26383663	8787
Megasphaera elsdenii	907	PRJNA398182	398182	Terrabacteria group	Firmicutes	2.42903	53.2	-	NQMW01	26	2276	2133	8/29/17	8/30/17	Contig	Translational Health Science and Technology Institute	SAMN07503204	GCA_002276195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/195/GCA_002276195.1_ASM227619v1	-	indica
Pseudomonas fragi A22	1134475	PRJNA81421	81421	Proteobacteria	Gammaproteobacteria	5.07089	58.6	-	AHZY01	48	4636	4478	2/24/12	5/19/17	Scaffold	BGI	SAMN02470565	GCA_000250595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/595/GCA_000250595.1_ASM25059v1	22628506	A22
Nocardia brasiliensis	37326	PRJNA309852	309852	Terrabacteria group	Actinobacteria	9.19294	68	-	LRRM01	66	8304	8121	7/20/16	4/13/17	Contig	Universidad Autonoma de Nuevo Leon	SAMN04441029	GCA_001689765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/765/GCA_001689765.1_ASM168976v1	-	HUJEG-1
Vibrio cyclitrophicus	47951	PRJNA322700	322700	Proteobacteria	Gammaproteobacteria	4.95777	43.6	-	LZFU01	93	4452	4230	6/23/16	4/5/17	Contig	UC Davis	SAMN05172610	GCA_001675875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/875/GCA_001675875.1_ASM167587v1	-	FRS31
Moraxella osloensis	34062	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.69218	43.4	-	LZDQ01	32	2447	2343	7/5/16	4/13/17	Scaffold	TAILORED-Treatment project	SAMN05214362	GCA_001679205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/205/GCA_001679205.1_ASM167920v1	-	CCUG 57516
Enterococcus cecorum	44008	PRJNA284446	284446	Terrabacteria group	Firmicutes	2.25895	36.3	-	LDOW01	28	2258	2109	6/5/15	4/3/17	Contig	Warsaw University of Life Sciences (SGGW)	SAMN03702599	GCA_001020435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/435/GCA_001020435.1_ASM102043v1	26404586	1710s23
Sphingomonas melonis TY	621456	PRJNA307127	307127	Proteobacteria	Alphaproteobacteria	4.10078	67.1	-	LQCK02	68	3828	3696	3/10/16	4/12/17	Contig	Zhejiang University	SAMN04375932	GCA_001586395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/395/GCA_001586395.2_ASM158639v2	-	TY
Geobacillus thermoleovorans	33941	PRJNA318151	318151	Terrabacteria group	Firmicutes	3.40089	52.4	-	MDCP01	226	3563	3098	8/18/16	4/13/17	Contig	The University of Burdwan	SAMN04633480	GCA_001707765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/765/GCA_001707765.1_ASM170776v1	-	N7
Vibrio ordalii 12B09	314865	PRJNA164847	164847	Proteobacteria	Gammaproteobacteria	4.09773	44.6	-	AJYV02	54	3700	3492	8/13/12	4/13/17	Scaffold	MIT	SAMN02470510	GCA_000287135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/135/GCA_000287135.2_ASM28713v2	22955834	12B09
Yersinia pestis 3067	1345706	PRJNA208254	208254	Proteobacteria	Gammaproteobacteria	4.73609	47.6872	chromosome:NZ_CP006754.1/CP006754.1; plasmid pCD1:NZ_CP006753.1/CP006753.1; plasmid pMT1:NZ_CP006752.1/CP006752.1	-	3	4527	4262	7/30/15	3/26/17	Complete Genome	Los Alamos National Laboratory	SAMN03943655	GCA_001188795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/795/GCA_001188795.1_ASM118879v1	26383663	3067
Photorhabdus temperata subsp. khanii NC19	1004151	PRJNA65291	65291	Proteobacteria	Gammaproteobacteria	5.23234	43.6	-	AYSJ01	17	4602	4159	1/8/14	4/9/17	Scaffold	University of New Hampshire	SAMN02597464	GCA_000517265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/265/GCA_000517265.1_Photorhabdus_temperata_NC19	-	NC19
Acinetobacter bereziniae	106648	PRJNA297113	297113	Proteobacteria	Gammaproteobacteria	4.63993	38.0269	plasmid pNDM229:NZ_KT072713.1/KT072713.1	LKDJ01	122	4429	4129	1/6/16	4/10/17	Contig	INDEAR	SAMN04115377	GCA_001500155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/500/155/GCA_001500155.2_AbHPC229_1.0	26966220	HPC229
Acinetobacter parvus	134533	PRJNA278502	278502	Proteobacteria	Gammaproteobacteria	3.60557	39.5	-	LACJ01	117	3504	3259	3/25/15	4/6/17	Scaffold	Institut Pasteur de Paris	SAMN03420853	GCA_000962795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/795/GCA_000962795.1_ASM96279v1	26472823	CM11
Bifidobacterium asteroides DSM 20089	1437594	PRJNA237576	237576	Terrabacteria group	Actinobacteria	2.13859	60	-	JDTU01	115	1729	1615	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442012	GCA_000771125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/125/GCA_000771125.1_DSM-20089	25658111	DSM 20089
Pelosinus fermentans	365349	PRJEB15943	348234	Terrabacteria group	Firmicutes	5.02712	39.8	-	FNKF01	2	4672	4487	10/20/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04515679	GCA_900100555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/555/GCA_900100555.1_IMG-taxon_2642422525_annotated_assembly	-	"R7, DSM 17108"
Pseudomonas mandelii NBRC 103147	1215107	PRJDB215	171634	Proteobacteria	Gammaproteobacteria	6.92367	59.3	-	BDAF01	106	6441	6197	4/4/17	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046931	GCA_002091695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/695/GCA_002091695.1_ASM209169v1	-	NBRC 103147
Pseudomonas fuscovaginae DAR 77795	1246628	PRJDB1417	219083	Proteobacteria	Gammaproteobacteria	6.2523	61.3	-	BATD01	482	5783	3915	9/12/13	4/2/17	Contig	Charles Sturt University	SAMD00000760	GCA_000467005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/005/GCA_000467005.1_ASM46700v1	-	DAR77795
Yersinia pestis Pestoides F	386656	PRJNA16700	16700	Proteobacteria	Gammaproteobacteria	4.72586	47.6867	chromosome:NC_009381.1/CP000668.1; plasmid CD:NC_009377.1/CP000669.1; plasmid MT:NC_009378.1/CP000670.1	-	3	4509	4243	4/13/07	3/22/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598373	GCA_000016445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/445/GCA_000016445.1_ASM1644v1	-	Pestoides F
Yersinia pestis 1412	1345703	PRJNA208250	208250	Proteobacteria	Gammaproteobacteria	4.73348	47.6866	chromosome:NZ_CP006783.1/CP006783.1; plasmid pCD:NZ_CP006780.1/CP006780.1; plasmid pMT:NZ_CP006779.1/CP006779.1	-	3	4520	4249	7/30/15	3/26/17	Complete Genome	Los Alamos National Laboratory	SAMN03782999	GCA_001188695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/695/GCA_001188695.1_ASM118869v1	26383663	1412
Pseudomonas avellanae CRAFRUed2	1420589	PRJNA227271	227271	Proteobacteria	Gammaproteobacteria	5.64637	59	-	AYRI01	508	5317	4885	4/23/15	4/11/17	Contig	CRA	SAMN03497682	GCA_000978625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/978/625/GCA_000978625.2_ASM97862v2	-	CRAFRUed2
Amycolatopsis orientalis DSM 40040 = KCTC 9412	1125971	PRJNA201399	201399	Terrabacteria group	Actinobacteria	9.06245	69	-	ASJB01	99	8192	8002	5/13/13	4/9/17	Contig	KRIBB	SAMN02142155	GCA_000478275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/275/GCA_000478275.1_AO9412_01	23814036	KCTC 9412
Alcaligenes faecalis subsp. phenolicus DSM 16503	1120962	PRJNA185539	185539	Proteobacteria	Betaproteobacteria	4.24831	56.4	-	AUBT01	27	3945	3809	7/15/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441201	GCA_000429385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/429/385/GCA_000429385.1_ASM42938v1	-	DSM 16503
Bradyrhizobium elkanii USDA 3259	1079466	PRJNA162999	162999	Proteobacteria	Alphaproteobacteria	8.72246	63.9	-	AXAW01	101	8264	7782	9/30/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02440775	GCA_000473005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/005/GCA_000473005.1_ASM47300v1	-	USDA 3259
Phaeobacter inhibens	221822	PRJNA304642	304642	Proteobacteria	Alphaproteobacteria	4.40349	59.8	-	LOHU01	80	4221	3972	2/11/16	4/11/17	Scaffold	University of Rhode Island	SAMN04305441	GCA_001559785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/785/GCA_001559785.1_ASM155978v1	-	S4Sm
Enterococcus raffinosus cftri2200	1330525	PRJNA201080	201080	Terrabacteria group	Firmicutes	4.20769	39.4	-	ATKJ02	172	-	-	7/18/13	7/29/15	Scaffold	csir-cftri microbe	SAMN02299317	GCA_000438515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/515/GCA_000438515.2_3SKRG	24201206	cftri2200
Cronobacter dublinensis subsp. lausannensis LMG 23824	1159560	PRJNA89105	89105	Proteobacteria	Gammaproteobacteria	4.61334	57.9	-	AJKY01	105	4450	4118	6/7/13	4/8/17	Contig	Cronobacter Genus Genome Sequencing Consortium	SAMN02952932	GCA_000409365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/365/GCA_000409365.1_cdlau515_final_contigs	23724777	LMG 23824
Staphylococcus equorum UMC-CNS-924	1357294	PRJNA211360	211360	Terrabacteria group	Firmicutes	2.70086	33	-	AVBD01	39	2620	2494	9/11/13	4/1/17	Contig	University of Missouri - Columbia	SAMN02471902	GCA_000467635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/635/GCA_000467635.1_SEQU924	24136848	UMC-CNS-924
Mycobacterium haemophilum	29311	PRJNA284995	284995	Terrabacteria group	Actinobacteria	4.36649	63.9	-	LDPQ01	82	4146	3844	6/8/15	4/10/17	Contig	UCSF	SAMN03734845	GCA_001021485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/485/GCA_001021485.1_ASM102148v1	-	UC4
Yersinia pestis Pestoides F	386656	PRJNA239345	239345	Proteobacteria	Gammaproteobacteria	4.72832	47.6866	chromosome:NZ_CP009715.1/CP009715.1; plasmid pCD:NZ_CP009713.1/CP009713.1; plasmid pMT:NZ_CP009714.1/CP009714.1	-	3	4512	4240	2/9/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03121016	GCA_000834315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/315/GCA_000834315.1_ASM83431v1	25931590	Pestoides F
Mycobacterium phlei DSM 43239 = CCUG 21000	1226750	PRJNA173675	173675	Terrabacteria group	Actinobacteria	5.32233	69.4	-	ANBO01	45	5131	4949	3/8/16	4/12/17	Contig	Uppasala Univeristy & Jawaharlal Nehru University	SAMN04537322	GCA_001582015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/015/GCA_001582015.1_ASM158201v1	26941228	DSM 43239 = CCUG 21000
Yersinia pestis 1522	1345705	PRJNA208252	208252	Proteobacteria	Gammaproteobacteria	4.73864	47.6865	chromosome:NZ_CP006758.1/CP006758.1; plasmid pCD:NZ_CP006757.1/CP006757.1; plasmid pMT:NZ_CP006756.1/CP006756.1	-	3	4526	4252	7/30/15	3/26/17	Complete Genome	Los Alamos National Laboratory	SAMN03783057	GCA_001188715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/715/GCA_001188715.1_ASM118871v1	26383663	1522
Yersinia pestis 1413	1345704	PRJNA208251	208251	Proteobacteria	Gammaproteobacteria	4.73692	47.6865	chromosome:NZ_CP006762.1/CP006762.1; plasmid pCD:NZ_CP006761.1/CP006761.1; plasmid pMT:NZ_CP006760.1/CP006760.1	-	3	4521	4238	7/30/15	3/26/17	Complete Genome	Los Alamos National Laboratory	SAMN03783058	GCA_001188935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/935/GCA_001188935.1_ASM118893v1	26383663	1413
Paeniclostridium sordellii	1505	PRJEB8120	277646	Terrabacteria group	Firmicutes	3.56989	27.3	-	CEKY01	28	3484	3327	3/13/15	4/4/17	Contig	WTSI	SAMEA1572073	GCA_001372315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/315/GCA_001372315.1_R32668	-	R32668
Exiguobacterium sibiricum 255-15	262543	PRJNA10649	10649	Terrabacteria group	Firmicutes	3.04079	47.6793	chromosome:NC_010556.1/CP001022.1; plasmid pEXIG01:NC_010549.1/CP001023.1; plasmid pEXIG02:NC_010550.1/CP001024.1	-	3	3121	2988	4/3/08	4/6/17	Complete Genome	US DOE Joint Genome Institute	SAMN00120225	GCA_000019905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/905/GCA_000019905.1_ASM1990v1	"1,648,941,219,019,200"	255-15
Pseudomonas kilonensis	132476	PRJNA341585	341585	Proteobacteria	Gammaproteobacteria	6.55145	60.8	-	MRCO01	91	5956	5730	9/15/17	9/18/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05967355	GCA_002303965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/965/GCA_002303965.1_ASM230396v1	-	ACN4
Oribacterium sp. oral taxon 108 str. F0425	904296	PRJNA53571	53571	Terrabacteria group	Firmicutes	2.51836	43.3	-	AFIH01	1	2291	2065	5/23/11	4/17/17	Contig	J. Craig Venter Institute	SAMN00115116	GCA_000214455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/455/GCA_000214455.2_ASM21445v1	-	F0425
Thalassospira xiamenensis M-5 = DSM 17429	1123366	PRJEB18829	360790	Proteobacteria	Alphaproteobacteria	4.68795	54.7	-	FTON01	33	4361	4282	1/14/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02744133	GCA_900156715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/715/GCA_900156715.1_IMG-taxon_2681813519_annotated_assembly	-	DSM 17429
Acinetobacter sp. ATCC 27244	525244	PRJNA30949	30949	Proteobacteria	Gammaproteobacteria	3.43401	39.7	-	ABYN01	95	3221	3005	10/23/08	4/6/17	Scaffold	Baylor College of Medicine	SAMN00000625	GCA_000156555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/555/GCA_000156555.1_ASM15655v1	-	ATCC 27244
Pseudoalteromonas rubra	43658	PRJNA305221	305221	Proteobacteria	Gammaproteobacteria	5.91378	47.6619	chromosome 1:NZ_CP013611.1/CP013611.1; chromosome 2:NZ_CP013612.1/CP013612.1; plasmid pMBL6842:NZ_CP013613.1/CP013613.1	-	3	4988	4743	12/24/15	4/11/17	Complete Genome	South China Sea Institute of Oceanology	SAMN04320552	GCA_001482385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/385/GCA_001482385.1_ASM148238v1	-	SCSIO 6842
Klebsiella sp. MS 92-3	749535	PRJNA47223	47223	Proteobacteria	Gammaproteobacteria	5.64651	57.1	-	AFBO01	180	5756	5327	4/7/11	2/21/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189148	GCA_000195655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/655/GCA_000195655.1_ASM19565v1	-	MS 92-3
Flavobacterium sp. Root420	1736533	PRJNA297942	297942	FCB group	Bacteroidetes/Chlorobi group	5.62747	34.1	-	LMEF01	34	4735	4579	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155802	GCA_001427905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/905/GCA_001427905.1_Root420	26633631	Root420
Bacillus altitudinis	293387	PRJNA341563	341563	Terrabacteria group	Firmicutes	3.69244	41.2	-	MEHW01	113	3767	3692	3/20/17	3/22/17	Contig	The University of Burdwan	SAMN05726035	GCA_002042895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/895/GCA_002042895.1_ASM204289v1	-	SORB11
Frankia sp. DC12	683315	PRJNA157399	157399	Terrabacteria group	Actinobacteria	6.88434	71.9	-	LANG01	1	5743	5262	3/30/15	4/17/17	Scaffold	JGI	SAMN00114978	GCA_000966285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/285/GCA_000966285.1_ASM96628v1	26251504	DC12
Yersinia pestis KIM10+	187410	PRJNA288	288	Proteobacteria	Gammaproteobacteria	4.70174	47.6558	chromosome:NC_004088.1/AE009952.1; plasmid pMT-1:NC_004838.1/AF074611.1	-	2	4444	4231	7/29/02	3/22/17	Complete Genome	Univ. Wisconsin	SAMN02604093	GCA_000006645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/006/645/GCA_000006645.1_ASM664v1	12142430	KIM
Clostridium sp. SS2/1	411484	PRJNA18201	18201	Terrabacteria group	Firmicutes	3.14218	37.2	-	ABGC03	34	3085	2934	10/10/07	4/17/17	Scaffold	Washington University Genome Sequencing Center	SAMN00627071	GCA_000154545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/545/GCA_000154545.1_ASM15454v1	-	SS2/1
Yersinia pestis Nepal516	377628	PRJNA16646	16646	Proteobacteria	Gammaproteobacteria	4.64629	47.6514	chromosome:NC_008149.1/CP000305.1; plasmid pMT:NC_008118.1/CP000306.1; plasmid pPCP:NC_008119.1/CP000307.1	-	3	4409	4197	6/9/06	3/22/17	Complete Genome	DOE Joint Genome Institute	SAMN02598370	GCA_000013805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/805/GCA_000013805.1_ASM1380v1	16740952	Nepal516
Yersinia pestis A1122	1035377	PRJNA240102	240102	Proteobacteria	Gammaproteobacteria	4.67457	47.6483	chromosome 1:NZ_CP009840.1/CP009840.1; plasmid pMT:NZ_CP009841.1/CP009841.1; plasmid pPCP:NZ_CP009839.1/CP009839.1	-	3	4472	4239	2/9/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03074123	GCA_000834755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/755/GCA_000834755.1_ASM83475v1	25931590	A1122
Ruegeria sp. CECT 5091	1715692	PRJEB10702	301515	Proteobacteria	Alphaproteobacteria	4.62012	56.7	-	CYUD01	42	4516	4402	11/8/15	4/11/17	Contig	UVEG	SAMEA3542132	GCA_001458295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/295/GCA_001458295.1_Ruegeria_sp._CECT5091_Spades_Prokka	-	CECT 5091
Nitrosomonas sp. Nm58	200126	PRJEB16562	349830	Proteobacteria	Betaproteobacteria	3.31775	46.5	-	FNPQ01	126	3061	2798	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421754	GCA_900107335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/335/GCA_900107335.1_IMG-taxon_2675903036_annotated_assembly	-	Nm58
Leptolyngbya sp. PCC 6406	1173264	PRJNA159511	159511	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.77696	55.2	-	ALVV02	3	5134	4905	1/17/13	4/9/17	Scaffold	JGI	SAMN02261357	GCA_000332095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/095/GCA_000332095.2_ASM33209v2	23277585	PCC 6406
Yersinia pestis A1122	1035377	PRJNA67155	67155	Proteobacteria	Gammaproteobacteria	4.65841	47.6472	chromosome:NC_017168.1/CP002956.1; plasmid unnamed:NC_017169.1/CP002957.1; plasmid unnamed2:NC_017170.1/CP002958.1	-	3	4444	4257	8/5/11	3/22/17	Complete Genome	Los Alamos National Lab	SAMN02603531	GCA_000222975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/975/GCA_000222975.1_ASM22297v1	-	A1122
Yersinia pestis Angola	349746	PRJNA240101	240101	Proteobacteria	Gammaproteobacteria	4.67461	47.6186	chromosome:NZ_CP009935.1/CP009935.1; plasmid pCD:NZ_CP009937.1/CP009937.1; plasmid pMT:NZ_CP009934.1/CP009934.1; plasmid pPCP:NZ_CP009936.1/CP009936.1	-	4	4553	4133	2/9/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03177051	GCA_000834845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/845/GCA_000834845.1_ASM83484v1	25931590	Angola
Staphylococcus sp. ZWU0021	1339238	PRJNA205586	205586	Terrabacteria group	Firmicutes	2.68881	33	-	JTLN01	36	2657	2480	12/8/14	4/9/17	Scaffold	University of Oregon	SAMN03021538	GCA_000798895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/895/GCA_000798895.1_ZWU0021.1	-	ZWU0021
Corynebacterium sp. KPL1998	1203627	PRJNA170367	170367	Terrabacteria group	Actinobacteria	2.56813	59.3	-	AXLO01	4	2433	2286	10/21/13	4/17/17	Scaffold	Broad Institute	SAMN02596995	GCA_000477895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/895/GCA_000477895.1_Cory_sp_KPL1998_V1	-	KPL1998
Yersinia pestis str. Pestoides B	748678	PRJNA240105	240105	Proteobacteria	Gammaproteobacteria	4.79443	47.6161	chromosome:NZ_CP010023.1/CP010023.1; plasmid pCD:NZ_CP010022.1/CP010022.1; plasmid pMT:NZ_CP010021.1/CP010021.1; plasmid pPCP:NZ_CP010020.1/CP010020.1	-	4	4538	4248	2/9/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03218157	GCA_000834925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/925/GCA_000834925.1_ASM83492v1	25931590	Pestoides B
Escherichia sp. KTE114	1169321	PRJNA157561	157561	Proteobacteria	Gammaproteobacteria	4.75409	50.5	-	ASTS01	12	4755	4447	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00847639	GCA_000407765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/765/GCA_000407765.1_Esch_coli_KTE114_V1	-	KTE114
Erwinia sp. ErVv1	1603299	PRJEB8284	278834	Proteobacteria	Gammaproteobacteria	4.71902	54.6	-	CDPK01	72	4295	3979	3/20/15	4/12/17	Scaffold	FONDAZIONE EDMUND MACH	SAMEA3216243	GCA_900068895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/068/895/GCA_900068895.1_Ervv1.fasta	-	ErVv1
Nocardia sp. BMG51109	1056816	PRJNA179462	179462	Terrabacteria group	Actinobacteria	8.788	68.9	-	JAFQ01	4	7720	7393	1/14/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02584923	GCA_000526215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/215/GCA_000526215.1_ASM52621v1	-	BMG51109
Yersinia pestis Angola	349746	PRJNA16067	16067	Proteobacteria	Gammaproteobacteria	4.68701	47.615	chromosome:NC_010159.1/CP000901.1; plasmid new_pCD:NC_010157.1/CP000902.1; plasmid pMT-pPCP:NC_010158.1/CP000900.1	-	3	4566	4189	12/12/07	3/22/17	Complete Genome	TIGR	SAMN02604042	GCA_000018805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/805/GCA_000018805.1_ASM1880v1	20061468	Angola
Yersinia pestis CO92	214092	PRJNA235224	235224	Proteobacteria	Gammaproteobacteria	4.72285	47.6113	chromosome:NZ_CP009973.1/CP009973.1; plasmid unnamed_1:NZ_CP009972.1/CP009972.1; plasmid unnamed_2:NZ_CP009971.1/CP009971.1	-	3	4546	4312	2/9/15	3/26/17	Complete Genome	Los Alamos National Laboratory	SAMN03160774	GCA_001293415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/415/GCA_001293415.1_ASM129341v1	25931590	CO92
Yersinia pestis	632	PRJNA357858	357858	Proteobacteria	Gammaproteobacteria	4.8312	47.6111	chromosome:CP019708.1; plasmid pCD1:CP019710.1; plasmid pMT1:CP019709.1; plasmid pPCP1:CP019711.1	-	4	-	-	2/21/17	2/21/17	Complete Genome	NHGRI/NIH	SAMN06161235	GCA_002005285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/285/GCA_002005285.1_ASM200528v1	-	195/P
Oscillatoria acuminata PCC 6304	56110	PRJNA158709	158709	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.80427	47.611	chromosome:NC_019693.1/CP003607.1; plasmid pOSCIL6304.01:NC_019700.1/CP003608.1; plasmid pOSCIL6304.02:NC_019694.1/CP003609.1	-	3	6128	5879	12/5/12	4/17/17	Complete Genome	JGI	SAMN02261334	GCA_000317105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/105/GCA_000317105.1_ASM31710v1	-	PCC 6304
Bifidobacterium sp. MSTE12	1161409	PRJNA165897	165897	Terrabacteria group	Actinobacteria	2.59527	58.5	-	AZYA01	48	2234	2107	1/3/14	4/9/17	Contig	JCVI	SAMN02597441	GCA_000513015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/015/GCA_000513015.1_BspMSTE12v1.0	-	MSTE12
Yersinia pestis 2944	1345702	PRJNA208249	208249	Proteobacteria	Gammaproteobacteria	4.67274	47.6092	chromosome:NZ_CP006792.1/CP006792.1; plasmid pCD:NZ_CP006791.1/CP006791.1; plasmid pMT:NZ_CP006790.1/CP006790.1; plasmid pPCP:NZ_CP006793.1/CP006793.1	-	4	4476	4207	7/30/15	3/26/17	Complete Genome	Los Alamos National Laboratory	SAMN03941711	GCA_001188815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/815/GCA_001188815.1_ASM118881v1	26383663	2944
Yersinia pestis	632	PRJNA326509	326509	Proteobacteria	Gammaproteobacteria	4.77855	47.6065	chromosome:NZ_CP016273.1/CP016273.1; plasmid pCD1:NZ_CP016274.1/CP016274.1; plasmid pMT1:NZ_CP016275.1/CP016275.1; plasmid pPCP1:NZ_CP016276.1/CP016276.1	-	4	4612	4324	7/26/16	3/28/17	Complete Genome	USAMRIID	SAMN05282282	GCA_001693595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/595/GCA_001693595.1_ASM169359v1	-	Cadman
Nocardiopsis sp. NRRL B-16309	1519494	PRJNA238534	238534	Terrabacteria group	Actinobacteria	6.70617	72	-	LGEC01	158	5867	5613	9/4/15	4/11/17	Contig	University of Illinois	SAMN02900648	GCA_001279585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/585/GCA_001279585.1_ASM127958v1	-	NRRL B-16309
Yersinia pestis	632	PRJNA240100	240100	Proteobacteria	Gammaproteobacteria	4.70925	47.6065	chromosome:NZ_CP009704.1/CP009704.1; plasmid unnamed1:NZ_CP009702.1/CP009702.1; plasmid unnamed2:NZ_CP009703.1/CP009703.1; plasmid unnamed3:NZ_CP009701.1/CP009701.1	-	4	4505	4160	2/9/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN02769655	GCA_000834275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/275/GCA_000834275.1_ASM83427v1	25931590	Harbin35
Polaromonas sp. A23	1944133	PRJNA369603	369603	Proteobacteria	Betaproteobacteria	4.57883	61.1	-	MUNO01	51	4387	4275	2/16/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN06289802	GCA_002001015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/015/GCA_002001015.1_ASM200101v1	-	A23
Sulfurovum sp. FS08-3	1539065	PRJNA259227	259227	Proteobacteria	delta/epsilon subdivisions	2.54398	39.7	-	JQIS01	68	2285	2230	1/29/15	1/29/15	Contig	Penn State	SAMN03002795	GCA_000830175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/175/GCA_000830175.1_ASM83017v1	25620962	-
Thermoanaerobacter sp. A7A	1350366	PRJNA209289	209289	Terrabacteria group	Firmicutes	2.61461	34	-	AVAF01	178	-	-	8/9/13	9/20/13	Contig	"CSIRO Animal, Food and Health Sciences"	SAMN02212367	GCA_000445185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/185/GCA_000445185.1_Thermoanaerobacter	24029756	-
Pantoea sp. SL1_M5	697871	PRJNA49341	49341	Proteobacteria	Gammaproteobacteria	4.91973	55.1	-	ADWZ01	37	4706	4531	7/13/11	5/19/17	Contig	JGI	SAMN02441788	GCA_000220605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/605/GCA_000220605.2_ASM22060v2	-	Sl1_M5
Prevotella sp. AGR2160	1280674	PRJNA185697	185697	FCB group	Bacteroidetes/Chlorobi group	2.90838	51.5	-	AUJK01	49	2530	2409	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440817	GCA_000424185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/185/GCA_000424185.1_ASM42418v1	-	AGR2160
Enterococcus sp. HMSC064A12	1715019	PRJNA296146	296146	Terrabacteria group	Firmicutes	4.33033	39.1	-	LTKO01	153	4273	4138	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04495795	GCA_001808965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/965/GCA_001808965.1_ASM180896v1	-	HMSC064A12
Lactobacillus sp. FMNP02	1590063	PRJNA271220	271220	Terrabacteria group	Firmicutes	2.99002	47.8	-	JWZV01	15	3017	2654	1/2/15	4/10/17	Scaffold	South China Agricultural University	SAMN03273315	GCA_000814185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/185/GCA_000814185.1_ASM81418v1	-	FMNP02
Methylomonas sp. LWB	1905845	PRJNA345156	345156	Proteobacteria	Gammaproteobacteria	5.36538	55.9	-	MKMC01	100	4772	4538	10/28/16	4/13/17	Scaffold	University of Western Australia	SAMN05858748	GCA_001856095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/095/GCA_001856095.1_ASM185609v1	-	LWB
Deinococcus sp. LM3	1938608	PRJNA363096	363096	Terrabacteria group	Deinococcus-Thermus	4.36801	69.1	-	MUFV01	8	4002	3829	3/3/17	3/6/17	Contig	The University of Chicago	SAMN06263771	GCA_002017875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/875/GCA_002017875.1_ASM201787v1	-	LM3
Methylophilus sp. Leaf459	1736383	PRJNA297956	297956	Proteobacteria	Betaproteobacteria	2.94801	48.3	-	LMQX01	16	2763	2689	11/2/15	6/20/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151773	GCA_001425495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/495/GCA_001425495.1_Leaf459	26633631	Leaf459
Novosphingobium sp. FSW06-99	1739113	PRJNA299315	299315	Proteobacteria	Alphaproteobacteria	4.78703	64.6	-	LLZQ01	34	4348	4245	1/20/16	4/11/17	Scaffold	Bielefeld University	SAMN04193358	GCA_001519065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/065/GCA_001519065.1_ASM151906v1	-	FSW06-99
Treponema endosymbiont of Eucomonympha sp.	1580831	PRJDB3365	286024	Spirochaetes	Spirochaetia	1.41269	55.6	-	BBPV01	798	-	-	6/5/15	10/6/15	Contig	"Microbe Division (RIKEN BRC JCM), RIKEN BioResource Center"	SAMD00023469	GCA_001028525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/525/GCA_001028525.1_ASM102852v1	25979941	C1
Methylosinus sp. LW3	107635	PRJNA161487	161487	Proteobacteria	Alphaproteobacteria	5.09047	64.7	-	AZUO01	5	4726	4532	1/3/14	4/17/17	Scaffold	JGI	SAMN02597193	GCA_000527115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/115/GCA_000527115.1_ASM52711v1	-	LW3
Methanobrevibacter sp. 87.7	387957	PRJNA339853	339853	Euryarchaeota	Methanobacteria	1.92067	24.4	-	MRCT01	300	1645	1569	6/26/17	6/28/17	Contig	University of Illinois at Urbana Champaign	SAMN05608120	GCA_002208625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/625/GCA_002208625.1_ASM220862v1	-	87.7
Arcobacter sp. EP1	1665555	PRJNA277740	277740	Proteobacteria	delta/epsilon subdivisions	3.00587	31.9	-	LPNY01	229	-	-	6/3/16	6/3/16	Scaffold	University of Calgary	SAMN03763493	GCA_001655195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/195/GCA_001655195.1_ASM165519v1	27279223	-
Pseudanabaena sp. UBA1465	1947290	PRJNA348753	348753	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.51981	42.5	-	DCSN01	259	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454073	GCA_002325645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/645/GCA_002325645.1_ASM232564v1	28894102	-
Geitlerinema sp. BBD 1991-9	1643526	PRJNA281489	281489	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.98297	50.3	-	LWRO01	113	-	-	6/3/16	6/3/16	Scaffold	University of Michigan	SAMN04892670	GCA_001657325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/325/GCA_001657325.1_ASM165732v1	-	-
Anabaena sp. CA = ATCC 33047	52271	PRJNA314517	314517	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.55791	41.4	-	LUHI01	91	4693	4463	3/25/16	4/17/17	Scaffold	University of Texas at Austin	SAMN04536551	GCA_001597855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/855/GCA_001597855.1_ASM159785v1	-	ATCC 33047
Fischerella sp. PCC 9605	1173024	PRJNA158819	158819	Terrabacteria group	Cyanobacteria/Melainabacteria group	8.07918	42.6	-	ALVT01	12	6890	6443	1/8/14	4/10/17	Scaffold	JGI	SAMN02597161	GCA_000517105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/105/GCA_000517105.1_ASM51710v1	-	PCC 9605
Citrobacter sp. KTE151	1169322	PRJNA157563	157563	Proteobacteria	Gammaproteobacteria	5.26656	52.2	-	ASQK01	12	5163	4875	5/16/13	4/8/17	Scaffold	Broad Institute	SAMN00847640	GCA_000398845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/845/GCA_000398845.1_Esch_coli_KTE151_V1	-	KTE151
Methylobacterium sp. 77	1101192	PRJNA165569	165569	Proteobacteria	Alphaproteobacteria	4.66496	66.7	-	ARCS01	1	4281	4157	4/19/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02256406	GCA_000372825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/825/GCA_000372825.1_ASM37282v1	-	77
Herbaspirillum sp. YR522	1144342	PRJNA83109	83109	Proteobacteria	Betaproteobacteria	5.11304	63.8	-	AKJA01	168	4597	4391	7/27/12	5/18/17	Contig	Oak Ridge National Lab	SAMN00839653	GCA_000282575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/575/GCA_000282575.1_Herbaspirillum.strYR522_v1.0	23045501	YR522
Amycolatopsis sp. MJM2582	1427749	PRJNA245052	245052	Terrabacteria group	Actinobacteria	8.93298	68.9	-	JPLW01	13	8290	8079	9/11/14	4/9/17	Scaffold	The university of Cambridge	SAMN02731374	GCA_000754115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/115/GCA_000754115.1_ASM75411v1	25359910	MJM2582
Candidatus Arthromitus sp. SFB-mouse-NYU	1073972	PRJNA71495	71495	Terrabacteria group	Firmicutes	1.56987	27.9	-	AGAG01	5	1511	1447	9/6/11	4/7/17	Contig	NYU School of Medicine	SAMN02470737	GCA_000225365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/365/GCA_000225365.2_ASM22536v2	21925113	SFB-mouse-NYU
Paracoccus sp. PAMC 22219	1569209	PRJDB3271	266589	Proteobacteria	Alphaproteobacteria	4.01049	66.1	-	BBPH01	265	4040	3324	11/18/14	4/9/17	Contig	Incheon National University	SAMD00022858	GCA_000787695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/695/GCA_000787695.1_ASM78769v1	-	PAMC 22219
Nocardioides sp. URHA0032	1380388	PRJNA213776	213776	Terrabacteria group	Actinobacteria	4.56084	71.7	-	JIAV01	17	4480	4367	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743955	GCA_000620645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/645/GCA_000620645.1_ASM62064v1	-	URHA0032
Epulopiscium sp. AS2M-Bin002	1764959	PRJNA294498	294498	Terrabacteria group	Firmicutes	2.42888	29.3	-	LNZN01	403	2128	1779	2/27/17	2/27/17	Contig	King Abdullah University of Science and Technology (KAUST)	SAMN04288907	GCA_002007285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/285/GCA_002007285.1_AS2M	-	-
Erythrobacter sp. JL475	383381	PRJNA245370	245370	Proteobacteria	Alphaproteobacteria	3.26332	61.8	-	JMIV01	7	3132	3054	6/27/14	4/17/17	Contig	Xiamen University	SAMN02737000	GCA_000714765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/765/GCA_000714765.1_Ery_JL475_v1	-	JL475
Sulfitobacter sp. CB2047	1525218	PRJNA255862	255862	Proteobacteria	Alphaproteobacteria	3.76779	60.3	-	JPOY01	12	3689	3604	7/28/14	4/9/17	Contig	The University of Tennessee	SAMN02929411	GCA_000735125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/125/GCA_000735125.1_ASM73512v1	25377705	CB2047
Polaribacter sp. KT25b	1855336	PRJEB16430	349345	FCB group	Bacteroidetes/Chlorobi group	3.95156	29	chromosome I:NZ_LT629752.1/LT629752.1	-	1	3417	3323	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216503	GCA_900105145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/145/GCA_900105145.1_IMG-taxon_2667527435_annotated_assembly	-	KT25b
Marinobacter sp. LV10R510-11A	1415568	PRJEB22403	401623	Proteobacteria	Gammaproteobacteria	4.43659	53.7	chromosome I:LT907980.1	-	1	4384	3968	9/19/17	9/19/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04488490	GCA_900215155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/215/155/GCA_900215155.1_IMG-taxon_2617270900_annotated_assembly	-	LV10R510-11A
Photobacterium sp. CECT 9192	2006083	PRJEB19608	381186	Proteobacteria	Gammaproteobacteria	4.45568	39.4	-	FYAJ01	68	4010	3823	6/6/17	6/12/17	Scaffold	UVEG	SAMEA104113107	GCA_900185625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/625/GCA_900185625.1_P.andalusiensis_CECT9192T_SPAdes_Prokka_EMBL	-	CECT 9192
Roseovarius sp. 22II1-1F6A	1317112	PRJNA196729	196729	Proteobacteria	Alphaproteobacteria	4.13142	64.7	-	AQQQ01	46	3843	3697	6/28/17	6/30/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN07274262	GCA_002210085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/210/085/GCA_002210085.1_ASM221008v1	-	22II1-1F6A
Marinomonas sp. SBI22	1561206	PRJNA263854	263854	Proteobacteria	Gammaproteobacteria	5.19157	40.4	-	JSEN01	68	4781	4631	4/20/16	4/12/17	Scaffold	Scripps Institution of Oceanography	SAMN03107778	GCA_001624595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/624/595/GCA_001624595.1_ASM162459v1	-	SBI22
Roseobacter sp. AzwK-3b	351016	PRJNA19361	19361	Proteobacteria	Alphaproteobacteria	4.1787	61.8	-	ABCR01	31	4028	3865	6/26/07	5/19/17	Contig	Moore Foundation	SAMN02436151	GCA_000170875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/875/GCA_000170875.1_ASM17087v1	-	AzwK-3b
Yersinia pestis	632	PRJNA240108	240108	Proteobacteria	Gammaproteobacteria	4.70048	47.6065	chromosome:NZ_CP009991.1/CP009991.1; plasmid 1:NZ_CP009989.1/CP009989.1; plasmid 2:NZ_CP009990.1/CP009990.1; plasmid 3:NZ_CP009988.1/CP009988.1	-	4	4493	4180	2/9/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03216612	GCA_000834885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/885/GCA_000834885.1_ASM83488v1	25931590	Nicholisk 41
Yersinia pestis biovar Medievalis str. Harbin 35	547048	PRJNA30505	30505	Proteobacteria	Gammaproteobacteria	4.7095	47.6065	chromosome:NC_017265.1/CP001608.1; plasmid pCD:NC_017263.1/CP001609.1; plasmid pMT:NC_017266.1/CP001610.1; plasmid pPCP:NC_017264.1/CP001611.1	-	4	4503	4195	1/25/11	4/10/17	Complete Genome	ERIC (Enteropathogen Resource Integration Center)	SAMN02603222	GCA_000186725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/725/GCA_000186725.1_ASM18672v1	-	Harbin 35
Maribacter sp. MAR_2009_60	1250153	PRJEB16422	349352	FCB group	Bacteroidetes/Chlorobi group	4.5058	36.1	chromosome I:NZ_LT629754.1/LT629754.1	-	1	3897	3825	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05192545	GCA_900105105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/105/GCA_900105105.1_IMG-taxon_2675903128_annotated_assembly	-	MAR_2009_60
Dehalococcoides sp. JdFR-55	1935048	PRJNA269163	269163	Terrabacteria group	Chloroflexi	0.545773	62.8	-	MTNQ01	132	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226372	GCA_002011485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/485/GCA_002011485.1_ASM201148v1	28350381	-
Caulobacter sp. Root1472	1736470	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	5.7098	68.5	-	LMFX01	52	5236	5066	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155739	GCA_001426985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/985/GCA_001426985.1_Root1472	26633631	Root1472
Janthinobacterium sp. CG3	1075768	PRJNA82851	82851	Proteobacteria	Betaproteobacteria	6.26522	65.5	-	APFF01	7	5460	5213	3/6/13	5/18/17	Scaffold	JGI	SAMN02261310	GCA_000344615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/615/GCA_000344615.1_ASM34461v1	24265494	CG3
Geobacter sp. UBA698	1961402	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	4.33367	55.9	-	DBMM01	152	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452249	GCA_002298925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/925/GCA_002298925.1_ASM229892v1	28894102	-
Brevibacillus sp. WF146	319501	PRJNA319752	319752	Terrabacteria group	Firmicutes	4.28144	58.3	-	LXGJ01	358	4412	3963	6/21/16	4/17/17	Contig	Wuhan University	SAMN04904108	GCA_001673705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/705/GCA_001673705.1_ASM167370v1	-	WF146
Eubacterium sp. AB3007	1392487	PRJNA217194	217194	Terrabacteria group	Firmicutes	2.30175	53	-	JIAD01	1	2125	2031	4/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743913	GCA_000688015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/015/GCA_000688015.1_ASM68801v1	-	AB3007
Alcanivorax sp. 97CO-5	1435973	PRJNA231302	231302	Proteobacteria	Gammaproteobacteria	3.25156	54.5	-	AZYR01	32	2968	2872	1/30/14	4/9/17	Scaffold	"First Institute of Oceanography, State Oceanic Administration of China"	SAMN02641499	GCA_000524665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/665/GCA_000524665.1_97_5_for_version_1_of_the_Alcanivorax_sp._97CO-5_genome	25502673	97CO-5
Yersinia pestis CO92	214092	PRJNA34	34	Proteobacteria	Gammaproteobacteria	4.82986	47.6065	chromosome:NC_003143.1/AL590842.1; plasmid pCD1:NC_003131.1/AL117189.1; plasmid pMT1:NC_003134.1/AL117211.1; plasmid pPCP1:NC_003132.1/AL109969.1	-	4	4230	3979	10/15/01	8/1/16	Complete Genome	Sanger Institute	SAMEA1705942	GCA_000009065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/065/GCA_000009065.1_ASM906v1	"115,863,601,283,453,000,000,000"	CO92
Yersinia pestis	632	PRJNA240104	240104	Proteobacteria	Gammaproteobacteria	4.86152	47.6064	chromosome:NZ_CP009492.1/CP009492.1; plasmid pCD1:NZ_CP009491.1/CP009491.1; plasmid pMT1:NZ_CP009490.1/CP009490.1; plasmid pPCP1:NZ_CP009489.1/CP009489.1	-	4	4680	4378	2/9/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03074081	GCA_000834235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/235/GCA_000834235.1_ASM83423v1	25931590	PBM19
Brevundimonas sp. Leaf168	1736283	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	2.97364	66.4	-	LMOY01	14	2957	2863	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151663	GCA_001423685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/685/GCA_001423685.1_Leaf168	26633631	Leaf168
Carnobacterium sp. WN1374	1266850	PRJNA235090	235090	Terrabacteria group	Firmicutes	2.55299	35.3	-	JQNG01	5	2459	2291	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02745434	GCA_000745115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/115/GCA_000745115.1_ASM74511v1	-	WN1374
Pedobacter sp. BMA	1663685	PRJNA285889	285889	FCB group	Bacteroidetes/Chlorobi group	5.04063	40.5	-	LECU01	20	4272	4182	6/14/15	4/10/17	Contig	GCAT-SEEK	SAMN03761836	GCA_001027745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/745/GCA_001027745.1_ASM102774v1	-	BMA
Pseudovibrio sp. Ad37	989422	PRJNA298121	298121	Proteobacteria	Alphaproteobacteria	5.87506	51.1	-	LMCF01	224	5461	5151	4/19/16	4/17/17	Contig	University College Cork	SAMN04147120	GCA_001623075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/075/GCA_001623075.1_ASM162307v1	27065959	Ad37
Stenotrophomonas sp. Leaf70	1736233	PRJNA297956	297956	Proteobacteria	Gammaproteobacteria	4.03266	68.6	-	LMLT01	11	3559	3447	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151613	GCA_001422025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/025/GCA_001422025.1_Leaf70	26633631	Leaf70
Rhodoferax sp. RIFCSPLOWO2_12_FULL_60_11	1802019	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	2.98118	59.5	-	MHZY01	246	2944	2339	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315912	GCA_001828975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/975/GCA_001828975.1_ASM182897v1	27774985	-
Candidatus Pelagibacter sp. HTCC7211	439493	PRJNA19339	19339	Proteobacteria	Alphaproteobacteria	1.45689	29	-	ABVS01	1	1556	1511	9/24/08	4/17/17	Scaffold	The Gordon and Betty Moore Foundation Microbial Genome Sequencing Project	SAMN02436224	GCA_000155895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/895/GCA_000155895.1_ASM15589v1	-	HTCC7211
Thermotoga sp. EMP	1157949	PRJNA87045	87045	Thermotogae	Thermotogae	1.83507	46.2	-	AJII01	13	1904	1799	9/4/12	4/7/17	Contig	University of Alberta	SAMN02471522	GCA_000294555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/555/GCA_000294555.1_ASM29455v1	25500512	EMP
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.06181	47.6062	chromosome 1:NZ_CP012997.1/CP012997.1; chromosome 2:NZ_CP012998.1/CP012998.1	-	2	3907	3646	10/26/16	3/28/17	Complete Genome	University of Florida	SAMN03104885	GCA_000788715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/715/GCA_000788715.2_ASM78871v2	25538191	2012Env-9
Ruminococcus sp. 5_1_39BFAA	457412	PRJNA32503	32503	Terrabacteria group	Firmicutes	3.9307	41.4	-	ACII02	3	3613	3385	4/2/09	4/17/17	Contig	Broad Institute	SAMN02463719	GCA_000159975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/975/GCA_000159975.2_Ruminococus_sp_5_1_39B_FAA_V2	-	5_1_39BFAA
Thioalkalivibrio sp. ALJ5	1237929	PRJNA176448	176448	Proteobacteria	Gammaproteobacteria	2.98303	65.7	-	ARHY01	10	2867	2759	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441012	GCA_000377245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/245/GCA_000377245.1_ASM37724v1	-	ALJ5
Bacteroides sp. D2	556259	PRJNA32449	32449	FCB group	Bacteroidetes/Chlorobi group	6.92046	41.7	-	ACGA02	12	5313	5073	3/31/09	5/18/17	Scaffold	Broad Institute	SAMN02463697	GCA_000159075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/075/GCA_000159075.2_Bact_sp_D2_V2	-	D2
Exiguobacterium sp. ZOR0005	1339226	PRJNA205567	205567	Terrabacteria group	Firmicutes	2.83766	53.1	-	JTLB01	50	2926	2848	12/8/14	4/9/17	Scaffold	University of Oregon	SAMN03021521	GCA_000798975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/975/GCA_000798975.1_ZOR0005.1	-	ZOR0005
Thauera sp. 63	497321	PRJNA175412	175412	Proteobacteria	Betaproteobacteria	4.27582	66.3	-	AMXC01	102	4035	3871	11/6/12	6/20/17	Contig	Norwegian University of Life Sciences	SAMN02470720	GCA_000310165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/165/GCA_000310165.2_ASM31016v2	-	63
Colwellia sp. 8_GOM-1096m	1380381	PRJNA213769	213769	Proteobacteria	Gammaproteobacteria	4.13081	40.3	-	JONX01	62	3788	3574	6/25/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02744692	GCA_000712155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/155/GCA_000712155.1_ASM71215v1	-	8_GOM-1096m
Coprobacillus sp. 8_1_38FAA	450746	PRJNA39363	39363	Terrabacteria group	Firmicutes	2.50391	30.2	-	ACTF01	19	2665	2337	7/15/15	4/17/17	Scaffold	Broad Institute	SAMN00103304	GCA_001078315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/315/GCA_001078315.1_ASM107831v1	-	8_1_38FAA
Shigella sp. FC1655	1898038	PRJNA341904	341904	Proteobacteria	Gammaproteobacteria	4.05127	38	-	MIIW01	117	3767	3540	9/23/16	2/25/17	Scaffold	Christian Medical College	SAMN05730134	GCA_001742985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/985/GCA_001742985.1_ASM174298v1	-	FC1655
Prochlorococcus sp. RS04	1924287	PRJNA355059	355059	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.65632	31.4	chromosome:NZ_CP018346.1/CP018346.1	-	1	1840	1792	2/7/17	4/17/17	Chromosome	King Abdullah University of Science and Technology (KAUST)	SAMN06061933	GCA_001989455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/455/GCA_001989455.1_ASM198945v1	-	RS04
Fusobacterium sp. HMSC065F01	1739435	PRJNA300085	300085	Fusobacteria	Fusobacteriia	2.12718	26.8	-	LTWB01	56	2038	1920	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480360	GCA_001813745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/745/GCA_001813745.1_ASM181374v1	-	HMSC065F01
Azospirillum sp. B506	137721	PRJDA69983	69983	Proteobacteria	Alphaproteobacteria	7.2381	67.1	-	BADK01	1143	6826	5509	12/26/12	5/18/17	Scaffold	Kazusa DNA Research Institute	SAMD00036581	GCA_000333595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/595/GCA_000333595.1_ASM33359v1	-	B506
Desulfovibrio sp. 3_1_syn3	457398	PRJNA42529	42529	Proteobacteria	delta/epsilon subdivisions	3.66393	60.8	-	ADDR02	3	3182	3074	7/27/10	4/17/17	Contig	Broad Institute	SAMN02463836	GCA_000145315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/315/GCA_000145315.2_Desulfovibrio_sp3_1_syn3_V2	-	3_1_syn3
Actinomyces sp. oral taxon 848 str. F0332	649743	PRJNA38311	38311	Terrabacteria group	Actinobacteria	2.52042	64.4	-	ACUY02	4	2137	2032	8/11/09	4/17/17	Scaffold	WUGSC	SAMN00008757	GCA_000162895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/895/GCA_000162895.1_ASM16289v1	-	F0332
Micromonospora sp. HK10	1538294	PRJNA261561	261561	Terrabacteria group	Actinobacteria	6.91692	73.4	-	JTGL01	256	6221	5912	4/30/15	4/10/17	Scaffold	"CSIR-North East Institute of Science and Technology, Jorhat-785006, Assam,India"	SAMN03074852	GCA_000982955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/955/GCA_000982955.1_ASM98295v1	-	HK10
Rhodobacter sp. CCB-MM2	1786003	PRJNA309737	309737	Proteobacteria	Alphaproteobacteria	5.14912	66	-	LRRR01	136	4894	4756	7/21/16	4/13/17	Contig	Universiti Sains Malaysia	SAMN04440486	GCA_001691415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/415/GCA_001691415.1_ASM169141v1	-	CCB-MM2
Parabacteroides sp. 20_3	469591	PRJNA38767	38767	FCB group	Bacteroidetes/Chlorobi group	5.7499	45.2	-	ACRQ01	61	5050	4757	4/28/10	6/12/17	Scaffold	Broad Institute	SAMN02463760	GCA_000162535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/535/GCA_000162535.1_ASM16253v1	-	20_3
Yersinia pestis	632	PRJNA239341	239341	Proteobacteria	Gammaproteobacteria	4.83541	47.6058	chromosome:NZ_CP009723.1/CP009723.1; plasmid pCD:NZ_CP009721.1/CP009721.1; plasmid pMT:NZ_CP009722.1/CP009722.1; plasmid pPCP:NZ_CP009724.1/CP009724.1	-	4	4627	4388	2/9/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03120838	GCA_000834335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/335/GCA_000834335.1_ASM83433v1	25931590	Shasta
Acidaminococcus sp. CAG:542	1262687	PRJEB925	206751	Terrabacteria group	Firmicutes	2.04471	56.6	-	CBJX01	119	1894	1850	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138775	GCA_000437815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/815/GCA_000437815.1_MGS542	-	-
Dorea sp. CAG:317	1262873	PRJEB829	206874	Terrabacteria group	Firmicutes	2.33237	41.7	-	CBGJ01	42	2231	2206	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138564	GCA_000433535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/535/GCA_000433535.1_MGS317	-	-
Ralstonia sp. PBA	795666	PRJNA78957	78957	Proteobacteria	Betaproteobacteria	3.82911	63.7	-	AKCV01	48	3528	3440	6/25/12	4/17/17	Contig	Universiti Teknologi Malaysia	SAMN02471424	GCA_000272025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/025/GCA_000272025.1_ASM27202v1	-	PBA
Propionibacterium sp. KPL2009	1203635	PRJNA170375	170375	Terrabacteria group	Actinobacteria	2.49111	60.1	-	AXMD01	4	2518	2384	10/21/13	4/17/17	Scaffold	Broad Institute	SAMN02597010	GCA_000477655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/655/GCA_000477655.1_Prop_sp_KPL2009_V1	-	KPL2009
Olsenella sp. DNF00959	1476999	PRJNA246512	246512	Terrabacteria group	Actinobacteria	2.13402	66.6	-	LSDE01	13	1887	1803	2/8/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN03855786	GCA_001553055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/055/GCA_001553055.1_ASM155305v1	-	DNF00959
Alistipes sp. AL-1	1499682	PRJEB6472	251842	FCB group	Bacteroidetes/Chlorobi group	3.61109	58.3	-	CCIZ01	24	2969	2835	9/6/14	4/9/17	Contig	URMITE	SAMEA2603029	GCA_000751455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/455/GCA_000751455.1_Alistipes_jeddahmassiliense	-	-
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.05093	47.6054	chromosome 1:NZ_CP013013.1/CP013013.1; chromosome 2:NZ_CP013014.1/CP013014.1	-	2	3898	3660	10/26/16	3/28/17	Complete Genome	University of Florida	SAMN04168691	GCA_001854425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/425/GCA_001854425.1_ASM185442v1	-	Env-390
Neisseria sp. GT4A_CT1	665946	PRJNA40033	40033	Proteobacteria	Betaproteobacteria	2.73914	50.9	-	ACWS01	37	2794	2480	10/3/11	8/4/17	Scaffold	Broad Institute	SAMN02463802	GCA_000227275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/275/GCA_000227275.1_Neisseria_sp_GT4A_CT1_V1	-	GT4A_CT1
Porphyromonas sp. oral taxon 279 str. F0450	1125723	PRJNA78907	78907	FCB group	Bacteroidetes/Chlorobi group	2.2652	55.5	-	ALKJ01	51	1782	1690	8/27/12	4/17/17	Contig	J. Craig Venter Institute	SAMN00792234	GCA_000292995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/995/GCA_000292995.1_Psp279F0450v1.0	-	F0450
Anaerostipes sp. CAG:276	1262699	PRJEB807	206777	Terrabacteria group	Firmicutes	3.20378	44.4	-	CBFE01	46	3178	3143	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138498	GCA_000432215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/215/GCA_000432215.1_MGS276	-	-
Eggerthella sp. CAG:368	1262877	PRJEB853	206711	Terrabacteria group	Actinobacteria	1.60257	44.8	-	CBHM01	39	1422	1381	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138626	GCA_000434775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/775/GCA_000434775.1_MGS368	-	-
Tannerella sp. oral taxon BU063 isolate Cell 2	1411148	PRJNA213303	213303	FCB group	Bacteroidetes/Chlorobi group	3.03831	56.2	-	AYUF01	501	2610	2551	12/18/13	12/18/13	Contig	The Ohio State University	SAMN02264653	GCA_000510385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/510/385/GCA_000510385.1_BU063sc2	-	-
Labrenzia sp. C1B70	1397531	PRJNA217943	217943	Proteobacteria	Alphaproteobacteria	6.83146	58.8	-	AXCE01	63	6273	6142	10/21/13	4/9/17	Contig	University of Illinois at Chicago	SAMN02345641	GCA_000475395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/395/GCA_000475395.1_De_Novo_assembly	24356826	C1B70
Yersinia pestis	632	PRJNA240085	240085	Proteobacteria	Gammaproteobacteria	4.83826	47.6053	chromosome:NZ_CP009785.1/CP009785.1; plasmid pCD:NZ_CP009783.1/CP009783.1; plasmid pMT:NZ_CP009784.1/CP009784.1; plasmid pPCP:NZ_CP009782.1/CP009782.1	-	4	4637	4392	2/9/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03145064	GCA_000834495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/495/GCA_000834495.1_ASM83449v1	25931590	El Dorado
Peptoniphilus sp. HMSC075B08	1739525	PRJNA300176	300176	Terrabacteria group	Firmicutes	1.89602	34.2	-	LTTA01	37	1827	1734	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480441	GCA_001815405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/405/GCA_001815405.1_ASM181540v1	-	HMSC075B08
Veillonella sp. oral taxon 780 str. F0422	944564	PRJNA61835	61835	Terrabacteria group	Firmicutes	1.73101	39.4	-	AFUJ01	75	1597	1423	7/25/11	4/17/17	Contig	J. Craig Venter Institute	SAMN00195310	GCA_000221605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/605/GCA_000221605.2_ASM22160v1	-	F0422
Capnocytophaga sp. oral taxon 338 str. F0234	888059	PRJNA53023	53023	FCB group	Bacteroidetes/Chlorobi group	2.54842	37	-	AEXX01	29	2370	2214	3/10/11	4/17/17	Scaffold	Baylor College of Medicine	SAMN00253971	GCA_000192225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/225/GCA_000192225.1_ASM19222v1	-	F0234
Coprococcus sp. CAG:131	1262862	PRJEB709	206596	Terrabacteria group	Firmicutes	2.83607	44.2	-	CBEE01	73	2425	2396	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138716	GCA_000436635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/635/GCA_000436635.1_MGS131	-	-
Delftia sp. 670	1537702	PRJNA252789	252789	Proteobacteria	Betaproteobacteria	6.75271	66.4	-	JNWI01	159	6296	4074	6/18/14	4/10/17	Contig	State Key Laboratory of Pathogen and Biosecurity	SAMN02863026	GCA_000710145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/145/GCA_000710145.1_ASM71014v1	-	670
Collinsella sp. An268	1965612	PRJNA377666	377666	Terrabacteria group	Actinobacteria	2.37094	65.3	-	NFJH01	26	2083	1987	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473698	GCA_002159765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/765/GCA_002159765.1_ASM215976v1	-	An268
Thalassospira sp. MCCC 1A02898	501868	PRJNA305771	305771	Proteobacteria	Alphaproteobacteria	4.42544	54.8	-	LPXK01	14	4104	4022	4/8/16	4/17/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN04332632	GCA_001618185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/185/GCA_001618185.1_ASM161818v1	-	MCCC 1A02898
Sulfurospirillum sp. SCADC	1537915	PRJNA258483	258483	Proteobacteria	delta/epsilon subdivisions	2.66174	41.6	-	JQGK01	38	2565	2496	8/25/14	10/30/14	Contig	Hydrocarbon Metagenomic Project	SAMN02998125	GCA_000743525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/525/GCA_000743525.1_ASM74352v1	25323712	-
Loktanella sp. 22II-4b	1317115	PRJNA196732	196732	Proteobacteria	Alphaproteobacteria	3.41836	66.6	-	AQQT01	30	3204	2799	6/28/17	6/28/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN07274260	GCA_002210125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/210/125/GCA_002210125.1_ASM221012v1	-	22II-4b
Alteromonas sp. V450	1912139	PRJNA349745	349745	Proteobacteria	Gammaproteobacteria	4.3949	44	-	MODU01	5	3861	3750	11/21/16	4/16/17	Contig	Florida Atlantic University	SAMN05931236	GCA_001885075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/075/GCA_001885075.1_ASM188507v1	-	V450
Afipia sp. OHSU_II-C2	1297861	PRJNA191807	191807	Proteobacteria	Alphaproteobacteria	5.083	61.1	-	APJH01	69	4920	4773	11/20/13	4/9/17	Contig	FDA	SAMN02952944	GCA_000497595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/595/GCA_000497595.1_OHSU_S-C2	24155888	OHSU_II-C2
Yersinia pestis D182038	637385	PRJNA36545	36545	Proteobacteria	Gammaproteobacteria	4.80226	47.6053	chromosome:NC_017160.1/CP001589.1; plasmid pCD1:NC_017157.1/CP001590.1; plasmid pMT1:NC_017158.1/CP001591.1; plasmid pPCP1:NC_017159.1/CP001592.1	-	4	4589	4182	11/4/09	3/22/17	Complete Genome	"State Key Laboratory for Infectious Disease Prevention and Control, Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02603872	GCA_000022825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/825/GCA_000022825.1_ASM2282v1	19815893	D182038
Haemophilus sp. HMSC066A11	1739317	PRJNA299967	299967	Proteobacteria	Gammaproteobacteria	1.88824	38	-	LTFQ01	66	1899	1758	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477628	GCA_001811665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/665/GCA_001811665.1_ASM181166v1	-	HMSC066A11
Methanosarcina sp. 1.H.T.1A.1	1483602	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	3.84214	43.1	-	JJQY01	160	3335	3085	4/23/15	4/10/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708994	GCA_000979295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/295/GCA_000979295.1_gtlEnvA5udCFS	25756680	1.H.T.1A.1
Aerococcus sp. HMSC062B07	1715159	PRJNA296287	296287	Terrabacteria group	Firmicutes	2.15017	41.7	-	LTIV01	29	1956	1865	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477533	GCA_001809895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/895/GCA_001809895.1_ASM180989v1	-	HMSC062B07
Selenomonas sp. oral taxon 149 str. 67H29BP	864563	PRJNA50535	50535	Terrabacteria group	Firmicutes	2.47112	56.7	-	AEEJ01	16	2402	2258	8/23/10	4/17/17	Scaffold	Baylor College of Medicine	SAMN02299442	GCA_000146365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/146/365/GCA_000146365.1_ASM14636v1	-	67H29BP
Thiomonas sp. ACO3	1629663	PRJEB8791	321398	Proteobacteria	Betaproteobacteria	3.60942	63.8	-	CTRK01	65	3464	3311	5/12/16	4/12/17	Contig	Genoscope CEA	SAMEA3305446	GCA_900004955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/004/955/GCA_900004955.1_BBA-H_PRJEB8791_v1	-	ACO3
Rhodanobacter sp. Root627	1736572	PRJNA297942	297942	Proteobacteria	Gammaproteobacteria	3.71084	65.5	-	LMGW01	6	3311	3227	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155841	GCA_001427835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/835/GCA_001427835.1_Root627	26633631	Root627
Rothia sp. HMSC058E10	1715088	PRJNA296216	296216	Terrabacteria group	Actinobacteria	2.43922	53.7	-	LTJT01	47	2101	1978	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477506	GCA_001809415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/415/GCA_001809415.1_ASM180941v1	-	HMSC058E10
Sphingobacterium sp. PM2-P1-29	403776	PRJEB6531	258268	FCB group	Bacteroidetes/Chlorobi group	5.36602	36.8	-	-	188	4717	4370	-	-	Scaffold	UNIVERSITY OF MINNESOTA	SAMEA2604507	GCA_000938735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/735/GCA_000938735.2_ASM93873v2	-	-
Methanobacterium sp. 42_16	1641383	PRJNA278302	278302	Euryarchaeota	Methanobacteria	2.17329	41.8	-	LGGL01	219	2267	2267	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445165	GCA_001509005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/005/GCA_001509005.1_ASM150900v1	26787827	-
Tepidanaerobacter sp. UBA3909	1947648	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.78279	41.6	-	DGFD01	167	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457575	GCA_002391505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/505/GCA_002391505.1_ASM239150v1	28894102	-
Desulfosporosinus sp. OL	1888891	PRJNA338386	338386	Terrabacteria group	Firmicutes	5.29288	43.6	-	MLBF01	271	5202	4829	1/5/17	4/16/17	Contig	"Institute of Bioengineering, Research Center of Biotechnology of RAS"	SAMN05892169	GCA_001936615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/615/GCA_001936615.1_ASM193661v1	-	OL
Citromicrobium sp. WPS32	1634517	PRJNA279211	279211	Proteobacteria	Alphaproteobacteria	3.16111	64.9	-	LAPS01	16	3084	2996	10/2/15	4/11/17	Contig	Xiamen University	SAMN03438112	GCA_001306295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/295/GCA_001306295.1_ASM130629v1	-	WPS32
Megasphaera sp. BL7	1285585	PRJNA183981	183981	Terrabacteria group	Firmicutes	2.65648	53.2	-	APHX01	246	2627	2292	7/2/13	4/8/17	Contig	National Centre for Cell Science	SAMN02470615	GCA_000417525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/525/GCA_000417525.1_BL7version1	24260205	BL7
Yersinia pestis D106004	637382	PRJNA36507	36507	Proteobacteria	Gammaproteobacteria	4.81292	47.6037	chromosome:NC_017154.1/CP001585.1; plasmid pCD1:NC_017153.1/CP001586.1; plasmid pMT1:NC_017155.1/CP001587.1; plasmid pPCY1:NC_017156.1/CP001588.1	-	4	4590	4253	11/4/09	3/22/17	Complete Genome	"State Key Laboratory for Infectious Disease Prevention and Control, Institute for Communicable Disease Control and Prevention"	SAMN02603871	GCA_000022805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/805/GCA_000022805.1_ASM2280v1	19815893	D106004
Rheinheimera sp. F8	1763998	PRJNA304367	304367	Proteobacteria	Gammaproteobacteria	4.46461	51.8	chromosome:CP013656.1	-	1	3936	3781	1/20/16	4/5/16	Chromosome	TU Berlin	SAMN04299634	GCA_001518915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/915/GCA_001518915.1_ASM151891v1	-	F8
Nitrosopumilus sp. PRT-SC01	1527301	PRJNA257342	257342	TACK group	Thaumarchaeota	0.609612	33.1	-	JPUE01	140	780	738	10/16/15	10/16/15	Contig	"Scripps Institution of Oceanography, UC San Diego"	SAMN02941850	GCA_001321845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/845/GCA_001321845.1_ASM132184v1	-	-
Nitrospina sp. SCGC_AAA799_A02	1628278	PRJNA276499	276499	Nitrospinae/Tectomicrobia group	Nitrospinae	1.40427	49.4	-	JZKI01	97	1370	1140	7/1/15	7/1/15	Contig	King Abdullah University of Science and Technology (KAUST)	SAMN03375752	GCA_001044505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/505/GCA_001044505.1_ASM104450v1	-	-
Vibrio cholerae	666	PRJNA301765	301765	Proteobacteria	Gammaproteobacteria	4.06673	47.6011	chromosome 1:NZ_CP013313.1/CP013313.1; chromosome 2:NZ_CP013314.1/CP013314.1	-	2	3951	3743	11/30/16	3/28/17	Complete Genome	Nankai University	SAMN04256431	GCA_001887655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/655/GCA_001887655.1_ASM188765v1	27849586	E9120
Dehalococcoides mccartyi	61435	PRJNA376155	376155	Terrabacteria group	Chloroflexi	1.33749	47.6	chromosome:NZ_CP019946.1/CP019946.1	-	1	1441	1372	3/6/17	3/8/17	Complete Genome	University of Toronto	SAMN06350860	GCA_002021775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/775/GCA_002021775.1_ASM202177v1	-	KBDCA3
Hyphomicrobium sp. NDB2Meth4	1892846	PRJEB17664	353790	Proteobacteria	Alphaproteobacteria	4.08056	62.8	-	FPEJ01	17	3934	3838	11/16/16	4/16/17	Contig	Griffith University	SAMEA4534596	GCA_900117445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/445/GCA_900117445.1_NDB2Meth4_draft_genome_assembly	-	-
Acidiphilium sp. 21-62-4	1970293	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	0.686432	61.7	-	NCAW01	433	910	832	8/16/17	8/16/17	Contig	None	SAMN06622441	GCA_002255545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/545/GCA_002255545.1_ASM225554v1	-	-
Aeromicrobium sp. Root495	1736550	PRJNA297942	297942	Terrabacteria group	Actinobacteria	3.57569	70.4	-	LMFJ01	4	3543	3456	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155819	GCA_001426755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/755/GCA_001426755.1_Root495	26633631	Root495
Anaerococcus sp. SB3	1673719	PRJEB9754	288674	Terrabacteria group	Firmicutes	1.90353	29.7	-	CWHU01	5	1815	1709	7/1/15	4/10/17	Contig	URMITE	SAMEA3470890	GCA_001182725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/725/GCA_001182725.1_Anaerococcus_jeddahense	-	SB3
Xanthomonas sp. SHU166	1240726	PRJNA177122	177122	Proteobacteria	Gammaproteobacteria	4.7051	68.9	-	AQOJ01	1024	4278	3598	4/15/13	6/15/17	Contig	Colorado State University	SAMN02469642	GCA_000364685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/685/GCA_000364685.1_SHU166	-	SHU166
Kurthia sp. UBA4137	1946678	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.47916	35.7	-	DFWJ01	233	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453746	GCA_002380835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/835/GCA_002380835.1_ASM238083v1	28894102	-
Aerococcus sanguinicola	119206	PRJNA308559	308559	Terrabacteria group	Firmicutes	2.03385	47.6	chromosome:NZ_CP014160.1/CP014160.1	-	1	1838	1745	2/1/16	4/16/17	Complete Genome	"Department of Clinical Microbiology, Slagelse Hospital, Denmark"	SAMN04419112	GCA_001543145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/145/GCA_001543145.1_ASM154314v1	27103727	CCUG43001
Sulfurimonas sp. RIFCSPLOWO2_12_FULL_34_6	1802254	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.72371	34.4	-	MICA01	367	1929	1548	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315862	GCA_001829695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/695/GCA_001829695.1_ASM182969v1	27774985	-
Atopobium sp. ICM42b	1190620	PRJNA165895	165895	Terrabacteria group	Actinobacteria	1.55708	48.3	-	JDFH01	36	1361	1294	2/6/14	4/17/17	Contig	JCVI	SAMN02344600	GCA_000564995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/995/GCA_000564995.1_AspICM42bv1.0	-	ICM42b
Spirochaeta sp. UBA2779	1947541	PRJNA348753	348753	Spirochaetes	Spirochaetia	3.09366	46.6	-	DEIH01	278	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451509	GCA_002352375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/375/GCA_002352375.1_ASM235237v1	28894102	-
Dehalobacter sp. UNSWDHB	1339256	PRJNA205884	205884	Terrabacteria group	Firmicutes	3.20156	44.9	-	AUUR01	185	3105	2944	8/9/13	4/8/17	Scaffold	The University of New South Wales	SAMN02471907	GCA_000445165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/165/GCA_000445165.1_UNSWDHB	24051315	UNSWDHB
Cellvibrio sp. OA-2007	529823	PRJDB3489	276736	Proteobacteria	Gammaproteobacteria	4.59538	47.7	-	BBUL01	97	3984	3872	2/27/15	4/17/17	Contig	Kochi University of Technology	SAMD00025187	GCA_000953825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/825/GCA_000953825.1_ASM95382v1	25977437	OA-2007
Akkermansia sp. CAG:344	1262691	PRJEB840	206923	PVC group	Verrucomicrobia	3.02425	58.1	-	CBIA01	78	2575	2528	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138738	GCA_000437075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/075/GCA_000437075.1_MGS344	-	-
Chryseobacterium sp. UNC8MFCol	1340435	PRJNA205975	205975	FCB group	Bacteroidetes/Chlorobi group	4.98658	37.2	-	AXUZ01	29	4484	4351	10/25/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440767	GCA_000482305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/305/GCA_000482305.1_ASM48230v1	-	UNC8MFCol
Cellulomonas sp. Root930	1736609	PRJNA297942	297942	Terrabacteria group	Actinobacteria	4.24761	72.5	-	LMJI01	4	3967	3880	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155878	GCA_001429255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/255/GCA_001429255.1_Root930	26633631	Root930
Brevibacterium sp. HMSC07C04	1581130	PRJNA269899	269899	Terrabacteria group	Actinobacteria	2.46506	62.4	-	LWPT01	63	2255	2150	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436260	GCA_001815905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/905/GCA_001815905.1_ASM181590v1	-	HMSC07C04
Phyllobacterium sp. CL33Tsu	1798191	PRJEB17386	351584	Proteobacteria	Alphaproteobacteria	4.68833	58.9	-	FORJ01	12	4520	4399	10/31/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04515648	GCA_900113985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/985/GCA_900113985.1_IMG-taxon_2639762575_annotated_assembly	-	CL33Tsu
Oceanicaulis sp. UBA2681	1947007	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.99582	62.1	-	DEMB01	16	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06453892	GCA_002354675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/675/GCA_002354675.1_ASM235467v1	28894102	-
Hydrogenophaga sp. H7	1882399	PRJNA331085	331085	Proteobacteria	Betaproteobacteria	4.49932	67.1	-	MCIC01	20	4336	4207	3/14/17	3/16/17	Contig	Huazhong Agricultural University	SAMN05437237	GCA_002025745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/745/GCA_002025745.1_ASM202574v1	-	H7
Cycloclasticus sp. symbiont of Bathymodiolus heckerae	1284675	PRJNA318571	318571	Proteobacteria	Gammaproteobacteria	2.13043	42.2	-	LWTL01	123	2139	2011	4/19/17	4/19/17	Contig	Max Planck Institute for Marine Microbiology	SAMN04858324	GCA_002101235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/235/GCA_002101235.1_ASM210123v1	-	-
Mesorhizobium sp. WSM1293	1040984	PRJNA209496	209496	Proteobacteria	Alphaproteobacteria	6.93861	62.5	-	AZUV01	51	6815	6479	1/3/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02597200	GCA_000513875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/875/GCA_000513875.1_ASM51387v1	-	WSM1293
Bordetella sp. SCN 68-11	1660092	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	4.79918	67.6	-	MEFS01	486	4761	4072	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652495	GCA_001725665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/665/GCA_001725665.1_ASM172566v1	26031303	-
Rickettsia sp. wb	1851512	PRJNA322110	322110	Proteobacteria	Alphaproteobacteria	1.19668	32.2	-	LYMV01	244	1211	1008	8/18/16	4/13/17	Contig	Agricultural Research Organisation - volcani center - Israel	SAMN05017603	GCA_001707925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/925/GCA_001707925.1_ASM170792v1	-	wb
Micavibrio sp. UBA1664	1946907	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	1.61289	44	-	DCKW01	129	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451691	GCA_002320485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/485/GCA_002320485.1_ASM232048v1	28894102	-
Thiomicrospira sp. WB1	1685380	PRJNA307138	307138	Proteobacteria	Gammaproteobacteria	2.27945	53.7	-	LQBN01	6	2108	2050	1/8/16	4/11/17	Contig	"Red Sea Research Center, Saudi Arabia"	SAMN04376010	GCA_001507535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/535/GCA_001507535.1_ASM150753v1	26966216	WB1
Rhodovulum sp. ES.010	1882821	PRJEB18403	355838	Proteobacteria	Alphaproteobacteria	3.83294	68.1	-	FSRS01	2	3724	3567	12/14/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444722	GCA_900142935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/935/GCA_900142935.1_IMG-taxon_2703719235_annotated_assembly	-	ES.010
Variovorax sp. Root411	1736530	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	6.06454	66.6	-	LMDW01	21	5633	5418	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155799	GCA_001425205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/205/GCA_001425205.1_Root411	26633631	Root411
Capnocytophaga cynodegmi	28189	PRJEB8049	270928	FCB group	Bacteroidetes/Chlorobi group	2.69822	34.4	-	CDOG01	90	2407	2298	1/20/15	4/10/17	Contig	"BIOZENTRUM, UNIVERSITY OF BASEL"	SAMEA3180122	GCA_000827735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/827/735/GCA_000827735.1_Ccyn74.1	-	Ccy74
Vibrio breoganii	553239	PRJNA318805	318805	Proteobacteria	Gammaproteobacteria	3.92576	45.5	-	MAKG01	621	3581	3367	7/21/16	4/13/17	Scaffold	Massachusetts Institute of Technology	SAMN04867922	GCA_001691285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/285/GCA_001691285.1_ASM169128v1	-	1A06
Rhodovulum sulfidophilum DSM 1374	1188256	PRJDB1308	231366	Proteobacteria	Alphaproteobacteria	4.3463	66.8234	chromosome:NZ_DF260912.1/DF260912.1; plasmid Plasmid1:NZ_DF260913.1/DF260913.1; plasmid Plasmid2:NZ_DF260914.1/DF260914.1	BASI01	3	4048	3863	6/22/13	4/10/17	Chromosome	Tokyo Institute of Technology	SAMD00036750	GCA_000520135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/135/GCA_000520135.2_ASM52013v2	23929476	DSM 1374
Vibrio crassostreae	246167	PRJEB5882	284688	Proteobacteria	Gammaproteobacteria	5.72114	44.1	-	CCKB01	145	5168	4942	5/20/15	4/3/17	Contig	STATION BIOLOGIQUE DE ROSCOFF	SAMEA2591295	GCA_001048515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/515/GCA_001048515.1_VRSK39_PRJEB5882	-	J5-20
Vibrio genomosp. F10	723171	PRJNA318805	318805	Proteobacteria	Gammaproteobacteria	3.82301	44.1	-	MAJZ01	1041	3474	3193	7/21/16	4/13/17	Scaffold	Massachusetts Institute of Technology	SAMN04867941	GCA_001691155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/155/GCA_001691155.1_ASM169115v1	-	9CSC122
Vibrio tasmaniensis 1F-267	1191324	PRJNA167048	167048	Proteobacteria	Gammaproteobacteria	5.12752	43.8	-	AJZO02	275	4612	4371	6/25/12	4/5/17	Scaffold	Broad Institute	SAMN02470458	GCA_000272365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/365/GCA_000272365.2_ASM27236v2	22955834	1F-267
Acinetobacter venetianus	52133	PRJNA260597	260597	Proteobacteria	Gammaproteobacteria	3.76338	39.2	-	JRUE01	264	3687	3491	3/9/16	4/5/17	Contig	University of Florence	SAMN03070124	GCA_001584645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/645/GCA_001584645.1_ASM158464v1	26902269	LUH5627
Leptospira sp. serovar Kenya str. Sh9	1242991	PRJNA178173	178173	Spirochaetes	Spirochaetia	3.99513	40.1	-	ANIG01	95	3879	3565	3/15/13	4/8/17	Contig	J. Craig Venter Institute	SAMN01801601	GCA_000347195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/195/GCA_000347195.1_gls454066v01	-	Sh9
Pseudomonas alcaliphila	101564	PRJEB15768	347741	Proteobacteria	Gammaproteobacteria	5.28371	62.9	-	FNAE01	26	4947	4841	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216575	GCA_900101755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/755/GCA_900101755.1_IMG-taxon_2663762780_annotated_assembly	-	JCM 10630
Xanthomonas translucens pv. graminis ART-Xtg29	1195885	PRJNA167705	167705	Proteobacteria	Gammaproteobacteria	4.10086	68.6	-	ANGG01	788	3672	3166	11/21/12	3/31/17	Contig	Agroscope Reckenholz-Tänikon Research Station ART	SAMN02469394	GCA_000313775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/775/GCA_000313775.1_XTG29	23578314	ART-Xtg29
Snodgrassella alvi	1196083	PRJNA339423	339423	Proteobacteria	Betaproteobacteria	2.49711	41	-	NAGW01	88	2285	2181	4/13/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603552	GCA_002088415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/415/GCA_002088415.1_ASM208841v1	-	Aw-18
Yersinia ruckeri	29486	PRJNA278621	278621	Proteobacteria	Gammaproteobacteria	3.69972	47.6	chromosome:NZ_CP011078.1/CP011078.1	-	1	3384	3190	3/27/15	4/3/17	Complete Genome	"College of Biological Science, University of Guelph"	SAMN03421018	GCA_000964565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/565/GCA_000964565.1_ASM96456v1	-	Big Creek 74
Virgibacillus halodenitrificans	1482	PRJEB5861	241305	Terrabacteria group	Firmicutes	7.39914	48.7	-	CCDO01	19	7296	7088	5/16/14	1/30/15	Contig	URMITE	SAMEA3139051	GCA_000723865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/865/GCA_000723865.1_PRJEB5861_assembly_1	-	S2
Paraburkholderia terrae	311230	PRJNA385388	385388	Proteobacteria	Betaproteobacteria	11.2977	61.8	-	NFVC01	842	10577	9802	5/24/17	5/26/17	Contig	University of Groningen	SAMN06888378	GCA_002157305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/305/GCA_002157305.1_ASM215730v1	-	BS437
Acinetobacter baylyi	202950	PRJNA381126	381126	Proteobacteria	Gammaproteobacteria	3.38838	42.9	-	NBNP01	410	3441	3015	6/21/17	6/24/17	Contig	Qingdao Agriculture University	SAMN06670746	GCA_002204165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/165/GCA_002204165.1_ASM220416v1	-	L7
Alicycliphilus sp. UBA2076	1946000	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	2.2715	67.3	-	DCZU01	267	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454684	GCA_002331945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/945/GCA_002331945.1_ASM233194v1	28894102	-
Cupriavidus sp. UYPR2.512	1080187	PRJNA165301	165301	Proteobacteria	Betaproteobacteria	7.85895	65.3	-	ARBE01	365	7411	6787	4/22/13	5/18/17	Scaffold	DOE Joint Genome Institute	SAMN02256448	GCA_000379565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/565/GCA_000379565.1_ASM37956v1	-	UYPR2.512
Bacteriovorax sp. MedPE-SWde	1860085	PRJNA318731	318731	Proteobacteria	Oligoflexia	3.75551	35.7	-	MPCU01	15	3657	3614	11/10/16	11/10/16	Contig	University Miguel Hernandez	SAMN05219210	GCA_001874305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/305/GCA_001874305.1_ASM187430v1	27446036	-
Rodentibacter pneumotropicus	758	PRJNA343597	343597	Proteobacteria	Gammaproteobacteria	2.40318	39.8	-	MKZZ01	37	2335	2198	2/15/17	2/22/17	Contig	University of Copenhagen	SAMN05858750	GCA_001998565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/565/GCA_001998565.1_de_novo_assembly	-	P441
Porphyromonas macacae	28115	PRJNA253705	253705	FCB group	Bacteroidetes/Chlorobi group	2.31387	43.3	-	JRFB01	48	2002	1895	10/27/14	4/9/17	Contig	UC Davis	SAMN03004274	GCA_000769055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/055/GCA_000769055.1_ASM76905v1	25858832	COT-192 OH2631
Methylotenera sp. G11	1506585	PRJNA251774	251774	Proteobacteria	Betaproteobacteria	2.5451	50.7	-	JUHH01	1	2413	2334	12/9/14	6/20/17	Contig	DOE Joint Genome Institute	SAMN02850020	GCA_000799735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/735/GCA_000799735.1_ASM79973v1	25657279	G11
Pandoraea sp. PE-S2R-1	1986994	PRJNA385617	385617	Proteobacteria	Betaproteobacteria	6.2273	63.1	-	NGUR01	189	5386	5247	6/8/17	6/10/17	Contig	Washington University in Saint Louis	SAMN06915399	GCA_002179865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/865/GCA_002179865.1_ASM217986v1	-	PE-S2R-1
Sinorhizobium sp. GL28	1358418	PRJNA211976	211976	Proteobacteria	Alphaproteobacteria	7.61211	61.5	-	AUSZ01	345	7247	6759	12/7/15	4/11/17	Contig	Huazhong Agricultural University	SAMN04301587	GCA_001461685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/461/685/GCA_001461685.1_ASM146168v1	-	GL28
Wohlfahrtiimonas chitiniclastica	400946	PRJNA382997	382997	Proteobacteria	Gammaproteobacteria	2.18299	43.5	-	NEFC01	16	2079	2003	8/15/17	8/17/17	Contig	Centers for Disease Control and Prevention	SAMN06758454	GCA_002252145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/145/GCA_002252145.1_ASM225214v1	-	G9145
Methanobacterium formicicum JCM 10132	1300163	PRJDB899	243776	Euryarchaeota	Methanobacteria	2.45173	41.2	-	BBES01	89	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016804	GCA_001316325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/325/GCA_001316325.1_ASM131632v1	-	JCM 10132
Hyphomonas sp. ND6WE1B	1848191	PRJNA244670	244670	Proteobacteria	Alphaproteobacteria	3.82676	60.8	-	LXTV01	234	3838	3582	7/12/16	4/13/17	Contig	US Naval Research laboratory	SAMN04933612	GCA_001683975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/975/GCA_001683975.1_ASM168397v1	-	ND6WE1B
Butyricicoccus pullicaecorum DSM 23266	1121128	PRJEB19577	376360	Terrabacteria group	Firmicutes	3.27084	54.1	-	FUXW01	35	3161	3042	3/4/17	3/10/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745978	GCA_900167005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/005/GCA_900167005.1_IMG-taxon_2585428076_annotated_assembly	-	DSM 23266
Thioclava sp. DLFJ4-1	1915313	PRJNA352378	352378	Proteobacteria	Alphaproteobacteria	4.36161	63.8	-	MPZT01	14	4185	4089	3/6/17	3/9/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05969903	GCA_002020145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/145/GCA_002020145.1_ASM202014v1	-	DLFJ4-1
Pseudoxanthomonas sp. GW2	1211114	PRJNA170822	170822	Proteobacteria	Gammaproteobacteria	3.34943	71.4	-	ALIP01	167	3130	2937	7/30/12	4/17/17	Contig	Shanghai Jiao Tong University	SAMN02470942	GCA_000283075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/075/GCA_000283075.1_GW2	-	GW2
Halorubrum sp. WN019	2032630	PRJNA400731	400731	Euryarchaeota	Halobacteria	3.50665	67.4	-	NSKC01	27	3329	3200	9/6/17	9/8/17	Contig	"Institute of Agricultural c and Regional Planning, Chinese Academy of Agricultural Sciences"	SAMN07573028	GCA_002286985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/985/GCA_002286985.1_ASM228698v1	-	WN019
Clostridium tyrobutyricum DSM 2637 = ATCC 25755 = JCM 11008	1121342	PRJNA198486	198486	Terrabacteria group	Firmicutes	3.00193	30.8	-	ARYO01	174	2962	2758	5/14/13	4/4/17	Contig	Universita Cattolica' del Sacro Cuore	SAMN02471386	GCA_000392375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/375/GCA_000392375.2_ASM39237v2	23950123	DSM 2637
Nocardia seriolae	37332	PRJDB1598	238991	Terrabacteria group	Actinobacteria	7.75829	68.3	-	BAWD02	339	7278	6762	2/20/14	4/10/17	Contig	Kochi University	SAMD00023549	GCA_000583715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/715/GCA_000583715.2_ASM58371v2	25767227	N-2927
Acidocella sp. 21-58-7	1970305	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.6091	57.8	-	NCBB01	436	2770	2617	8/16/17	8/16/17	Scaffold	None	SAMN06622435	GCA_002255715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/715/GCA_002255715.1_ASM225571v1	-	-
Limnohabitans sp. 2KL-27	1100705	PRJEB9573	292362	Proteobacteria	Betaproteobacteria	2.97038	60.3	-	CXOP01	2	2912	2839	8/8/15	8/1/17	Contig	Biology Centre of CAS	SAMEA3448420	GCA_001269345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/345/GCA_001269345.1_2KL-27.a1	-	2KL-27
Oscillibacter sp. PC13	1855299	PRJEB17348	351563	Terrabacteria group	Firmicutes	2.793	54.6	-	FOXE01	42	2759	2628	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216343	GCA_900115635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/635/GCA_900115635.1_IMG-taxon_2623620509_annotated_assembly	-	PC13
Mycobacterium fortuitum	1766	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.50556	66.1	-	LZSJ01	253	6384	6008	6/17/16	4/5/17	Contig	JCVI	SAMN04634206	GCA_001665415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/415/GCA_001665415.1_ASM166541v1	-	E1336
Aeromonas sp. DNP9	1535548	PRJNA322689	322689	Proteobacteria	Gammaproteobacteria	4.66293	58.5	-	LYSQ01	75	4311	4133	9/15/16	4/13/17	Contig	Instituto de Ecologia	SAMN05172505	GCA_001728955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/955/GCA_001728955.1_ASM172895v1	-	DNP9
Pseudomonas alcaligenes	43263	PRJEB18861	360718	Proteobacteria	Gammaproteobacteria	4.6293	64.1	-	FTMP01	23	4349	4210	1/14/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05878282	GCA_900156135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/135/GCA_900156135.1_IMG-taxon_2708742420_annotated_assembly	-	RU36E
Pseudomonas azotoformans	47878	PRJNA350775	350775	Proteobacteria	Gammaproteobacteria	7.16875	61	-	MNPV01	47	6548	6366	2/1/17	4/17/17	Contig	Technische Universitaet Muenchen	SAMN05945971	GCA_001983205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/205/GCA_001983205.1_ASM198320v1	-	DSM 18862
Pseudomonas citronellolis	53408	PRJNA296464	296464	Proteobacteria	Gammaproteobacteria	6.6393	67.4	-	LKKN01	137	5897	5739	11/19/15	4/11/17	Scaffold	Texas Tech University	SAMN04099648	GCA_001446995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/995/GCA_001446995.1_ASM144699v1	26824353	TTU2014-011ASC
Pseudomonas nitroreducens	46680	PRJNA268774	268774	Proteobacteria	Gammaproteobacteria	7.33368	64.2	-	JUEH01	91	7005	6738	12/24/14	4/10/17	Contig	CIB-CSIC	SAMN03224186	GCA_000807755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/755/GCA_000807755.1_ASM80775v1	25744991	Aramco J
Pseudomonas oryzihabitans	47885	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.10114	64.5	-	DDAS01	277	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452158	GCA_002332965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/965/GCA_002332965.1_ASM233296v1	28894102	-
Pseudomonas parafulva	157782	PRJNA280850	280850	Proteobacteria	Gammaproteobacteria	5.11984	61.5	-	LAWW01	23	4736	4555	7/22/15	4/3/17	Contig	Jishou University	SAMN03470078	GCA_001186195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/195/GCA_001186195.1_ASM118619v1	26337877	YAB-1
Pseudomonas plecoglossicida NBRC 103162 = DSM 15088	1215115	PRJNA221049	221049	Proteobacteria	Gammaproteobacteria	5.34757	63	-	JHYX01	58	4946	4668	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743900	GCA_000688275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/275/GCA_000688275.1_ASM68827v1	-	DSM 15088
Helicobacter heilmannii	35817	PRJEB7975	293180	Proteobacteria	delta/epsilon subdivisions	1.57471	47.9	-	CDMI01	73	1629	1477	8/17/15	4/11/17	Scaffold	UGENT	SAMEA3174167	GCA_001283085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/085/GCA_001283085.1_Hheil	-	-
Elizabethkingia meningoseptica	238	PRJNA336273	336273	FCB group	Bacteroidetes/Chlorobi group	4.03847	36.4	-	MCJH01	10	3667	3560	9/1/16	4/5/17	Contig	Michigan State University	SAMN05507161	GCA_001718075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/075/GCA_001718075.1_ASM171807v1	-	EM1
Cedecea neteri NBRC 105707 = ATCC 33855	1216978	PRJDB240	171908	Proteobacteria	Gammaproteobacteria	5.20327	54.1	-	BCTL01	139	4932	4733	2/18/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046737	GCA_001571265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/265/GCA_001571265.1_ASM157126v1	-	NBRC 105707
Chryseobacterium indologenes	253	PRJNA281304	281304	FCB group	Bacteroidetes/Chlorobi group	5.8308	36.9	-	LAZY01	171	5373	5216	5/26/15	4/10/17	Contig	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN03486965	GCA_001013295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/013/295/GCA_001013295.1_ASM101329v1	-	J31
Sphingomonas sanguinis	33051	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.92733	65.9	-	DGDF01	131	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452268	GCA_002385305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/305/GCA_002385305.1_ASM238530v1	28894102	-
Yersinia pseudotuberculosis	633	PRJNA239355	239355	Proteobacteria	Gammaproteobacteria	4.72834	47.6	chromosome:NZ_CP009786.1/CP009786.1	-	1	4376	4117	2/9/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03144835	GCA_000834435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/435/GCA_000834435.1_ASM83443v1	25931590	1
Pluralibacter gergoviae	61647	PRJNA285085	285085	Proteobacteria	Gammaproteobacteria	5.4007	59.1	-	LDZK01	84	5192	4902	6/23/15	4/3/17	Contig	UCSF	SAMN03737823	GCA_001038295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/295/GCA_001038295.1_ASM103829v1	-	JP84E9
Delftia tsuruhatensis	180282	PRJEB17084	351706	Proteobacteria	Betaproteobacteria	6.63923	66.6	-	FOKN01	49	5985	5789	10/31/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444579	GCA_900111975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/975/GCA_900111975.1_IMG-taxon_2675903019_annotated_assembly	-	LMG 29104
Bacillus sonorensis NBRC 101234 = KCTC 13918	1220591	PRJDB410	172609	Terrabacteria group	Firmicutes	4.40996	45.5	-	BCVZ01	64	4394	4144	2/27/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046988	GCA_001592005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/005/GCA_001592005.1_ASM159200v1	-	NBRC 101234
Shewanella algae	38313	PRJNA339142	339142	Proteobacteria	Gammaproteobacteria	4.54712	52.4	-	MDKA01	121	4086	3957	11/7/16	4/13/17	Contig	Georgia Institute of Technology	SAMN05580110	GCA_001870495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/495/GCA_001870495.1_ASM187049v1	-	BrY
Blastococcus sp. DSM 46786	1798227	PRJEB16849	350962	Terrabacteria group	Actinobacteria	4.58824	74.2	-	FOAO01	48	4397	4201	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04515665	GCA_900109665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/665/GCA_900109665.1_IMG-taxon_2634166326_annotated_assembly	-	DSM 46786
Acinetobacter schindleri	108981	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.24409	42.4	-	BCMD01	98	3082	2963	12/2/15	4/6/17	Contig	National Institute of Technology and Evaluation	SAMD00019892	GCA_001485065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/065/GCA_001485065.1_ASM148506v1	-	GTC 3703
Dickeya solani GBBC 2040	1226344	PRJNA173464	173464	Proteobacteria	Gammaproteobacteria	4.86005	56.2499	chromosome:NZ_CM001860.1/CM001860.1	AONX01	1	4310	3978	4/25/13	4/1/17	Chromosome	James Hutton Institute	SAMN02470092	GCA_000400565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/565/GCA_000400565.1_DSOGBBC2040_1.0	23887905	GBBC 2040
Dickeya dianthicola RNS04.9	1306405	PRJNA193390	193390	Proteobacteria	Gammaproteobacteria	4.72151	55.9	-	APVF01	1	4273	4003	4/21/15	4/18/17	Scaffold	Institut des Sciences du vegetal	SAMN03486531	GCA_000975305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/975/305/GCA_000975305.1_DdRNS04.9V1.0	26044429	RNS04.9
Dickeya sp. 2B12	1577887	PRJNA265153	265153	Proteobacteria	Gammaproteobacteria	4.34979	54.5	-	JSYG01	77	3974	3799	11/17/14	4/9/17	Contig	University of Malaya	SAMN03145754	GCA_000784735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/735/GCA_000784735.1_ASM78473v1	25657288	2B12
Microbacterium oleivorans	273677	PRJNA327390	327390	Terrabacteria group	Actinobacteria	2.91685	69.6	-	MAYO01	3	2855	2776	7/21/16	4/13/17	Scaffold	Oklahoma State University	SAMN05332987	GCA_001691565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/565/GCA_001691565.1_ASM169156v1	-	Wellendorf
Microbacterium paraoxydans	199592	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.94267	70.2	-	DELB01	214	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06454565	GCA_002354175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/175/GCA_002354175.1_ASM235417v1	28894102	-
Blautia sp. An249	1965603	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.93898	45	-	NFJL01	69	3896	3710	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473681	GCA_002159835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/835/GCA_002159835.1_ASM215983v1	-	An249
Mycobacterium mucogenicum	56689	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.24273	67	-	LZLC01	280	6083	5754	6/17/16	4/13/17	Contig	JCVI	SAMN04634163	GCA_001668705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/668/705/GCA_001668705.1_ASM166870v1	-	1127319.6
Leptotrichia sp. oral taxon 215 str. W9775	1321779	PRJNA198887	198887	Fusobacteria	Fusobacteriia	2.30849	31.4	-	AWVR01	54	2176	2065	9/18/13	4/17/17	Scaffold	Washington University	SAMN02436816	GCA_000469505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/505/GCA_000469505.1_ASM46950v1	-	W9775
Bacteroides pyogenes DSM 20611 = JCM 6294	1121100	PRJDB557	231996	FCB group	Bacteroidetes/Chlorobi group	3.40484	45.7	-	BAIR01	107	2919	2246	12/18/13	4/9/17	Contig	The University of Tokyo	SAMD00016376	GCA_000511755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/755/GCA_000511755.1_ASM51175v1	24482517	JCM 6294
Gordonia sp. QH-12	1437876	PRJNA232095	232095	Terrabacteria group	Actinobacteria	3.90146	68.4	-	JPYZ01	55	3683	3551	3/2/16	4/12/17	Scaffold	"Research Centre for Eco-Environmental Sciences, Chinese Academy of Sciences"	SAMN02464606	GCA_001578675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/675/GCA_001578675.1_ASM157867v1	27347943	QH-12
Anoxybacillus sp. KU2-6(11)	1535751	PRJNA258246	258246	Terrabacteria group	Firmicutes	2.8835	41.7	-	JPZN01	260	2999	2353	9/10/14	4/10/17	Contig	THE INSTITUTE OF CYTOLOGY AND GENETICS	SAMN02991088	GCA_000753875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/875/GCA_000753875.1_ASM75387v1	-	KU2-6(11)
Mucilaginibacter sp. OK268	1881048	PRJEB16303	348899	FCB group	Bacteroidetes/Chlorobi group	7.16084	42.4	-	FNJV01	19	5909	5798	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428975	GCA_900103125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/125/GCA_900103125.1_IMG-taxon_2690315638_annotated_assembly	-	OK268
Pelomonas sp. Root405	1736529	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	5.80996	67.8	-	LMDU01	18	5287	5151	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04155798	GCA_001425165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/165/GCA_001425165.1_Root405	26633631	Root405
Rhizobacter sp. Root16D2	1736479	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	6.60879	69	-	LMHL01	50	5962	5801	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155748	GCA_001428145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/145/GCA_001428145.1_Root16D2	26633631	Root16D2
Lactobacillus murinus	1622	PRJNA354437	354437	Terrabacteria group	Firmicutes	2.30802	40.2	-	MPSN01	18	2228	2095	1/18/17	4/16/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN06045933	GCA_001953785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/785/GCA_001953785.1_ASM195378v1	-	EF-1
Chitinophaga sp. CF118	1884367	PRJEB17215	351395	FCB group	Bacteroidetes/Chlorobi group	8.14399	41.4	-	FOMK01	34	6400	6280	10/30/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05518672	GCA_900112615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/615/GCA_900112615.1_IMG-taxon_2687453677_annotated_assembly	-	CF118
Massilia sp. Root335	1736517	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	7.11084	66.3	-	LMCY01	71	5925	5697	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155786	GCA_001425685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/685/GCA_001425685.1_Root335	26633631	Root335
Bacillus stratosphericus	293386	PRJNA277427	277427	Terrabacteria group	Firmicutes	3.68999	41.3	-	LDWS01	70	3808	3684	6/24/15	4/3/17	Contig	University of Malaya	SAMN03751791	GCA_001039015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/015/GCA_001039015.1_ASM103901v1	-	LK31
Leptospira alstonii	28452	PRJNA257125	257125	Spirochaetes	Spirochaetia	4.24783	42.6	-	JQRS01	224	3983	3740	2/24/16	4/11/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947766	GCA_001569395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/395/GCA_001569395.1_ASM156939v1	26833181	56661
Pseudomonas protegens	380021	PRJNA290438	290438	Proteobacteria	Gammaproteobacteria	7.06878	63.3	-	LHUX01	14	6401	6245	8/18/15	4/4/17	Contig	JLU	SAMN03891661	GCA_001269465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/465/GCA_001269465.1_ASM126946v1	-	PF
Haloferax sp. ATB1	1508454	PRJNA252523	252523	Euryarchaeota	Halobacteria	4.2237	61.8	-	JPES01	120	4050	3331	7/17/14	4/10/17	Contig	Rede Paraense de Genômica e Proteômica	SAMN02850979	GCA_000730175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/175/GCA_000730175.1_ASM73017v1	25125649	ATB1
Ochrobactrum sp. P6BS-III	1920636	PRJNA354074	354074	Proteobacteria	Alphaproteobacteria	5.25313	56.6	-	MPPJ01	65	4969	4652	2/17/17	3/6/17	Contig	Hasselt University	SAMN06041133	GCA_002016635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/635/GCA_002016635.1_ASM201663v1	-	P6BS-III
Vibrio jasicida 090810c	1280002	PRJDB723	203000	Proteobacteria	Gammaproteobacteria	5.95445	45.1	-	BAOC01	168	5414	5220	5/14/13	4/8/17	Contig	University of Miyazaki	SAMD00036656	GCA_000400285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/285/GCA_000400285.1_ASM40028v1	23710045	090810c
Porphyrobacter sp. CCH7-A1	1768773	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	4.30729	64.2	-	LSJG01	250	4209	4009	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299457	GCA_001556645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/645/GCA_001556645.1_ASM155664v1	-	CCH7-A1
Blastomonas sp. CCH13-E1	1768739	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	3.97903	64.3	-	LSHN01	113	3872	3743	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299410	GCA_001555705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/705/GCA_001555705.1_ASM155570v1	-	CCH13-E1
[Clostridium] stercorarium subsp. thermolacticum JCM 9324	1291049	PRJDB755	243664	Terrabacteria group	Firmicutes	2.91895	42.3	-	BAZZ01	49	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000481	GCA_001310995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/995/GCA_001310995.1_ASM131099v1	-	JCM 9324
Citrobacter amalonaticus	35703	PRJEB8301	276431	Proteobacteria	Gammaproteobacteria	4.87564	53.8	-	CDQV01	751	5058	4387	2/24/15	4/3/17	Contig	CGS-GL	SAMEA3217999	GCA_000936345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/345/GCA_000936345.1_3e8A_assembly	-	3e8A
Porphyromonas gulae	111105	PRJNA253619	253619	FCB group	Bacteroidetes/Chlorobi group	2.38856	48.5	-	JRAT01	31	2128	1966	10/10/14	4/2/17	Contig	UC Davis	SAMN03004272	GCA_000765945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/945/GCA_000765945.1_ASM76594v1	25858832	COT-052 OH3856
Cellulosimicrobium cellulans J36	935839	PRJNA202341	202341	Terrabacteria group	Actinobacteria	4.25218	74.7	-	JAGJ01	50	3788	3622	1/14/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02584947	GCA_000526595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/595/GCA_000526595.1_ASM52659v1	-	J36
Bibersteinia trehalosi Y31	1261658	PRJNA181952	181952	Proteobacteria	Gammaproteobacteria	2.33473	41	-	JACI01	2	2202	2089	5/26/16	4/12/17	Contig	Washington State University	SAMN02744543	GCA_001652405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/405/GCA_001652405.1_Bt_Y31_v1	-	Y31
Mycobacterium asiaticum	1790	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.13837	66.4	-	LZLF01	442	5915	5404	6/17/16	4/5/17	Contig	JCVI	SAMN05202163	GCA_001673165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/165/GCA_001673165.1_ASM167316v1	-	1337463.1
Mycobacterium neoaurum	1795	PRJNA308070	308070	Terrabacteria group	Actinobacteria	5.38301	66.9	-	LQMX01	43	5090	4941	1/11/16	4/11/17	Contig	Jiangxi Normal University	SAMN04386425	GCA_001510785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/785/GCA_001510785.1_ASM151078v1	-	MN2
Streptococcus oralis subsp. tigurinus	1077464	PRJNA302886	302886	Terrabacteria group	Firmicutes	1.96427	40.9	-	LNVG01	29	1978	1833	4/14/17	4/21/17	Contig	Genomic Research Laboratory (GRL)	SAMN04283922	GCA_002093515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/515/GCA_002093515.1_ASM209351v1	27505001	AZ_14
Acinetobacter soli	487316	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.33045	43.1	-	BBNM01	33	3163	3050	9/26/14	4/6/17	Contig	National Institute of Technology and Evaluation	SAMD00019893	GCA_000760595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/595/GCA_000760595.1_ASM76059v1	-	KCTC 22184
Acinetobacter indicus	756892	PRJNA356369	356369	Proteobacteria	Gammaproteobacteria	3.45884	45.5	-	MRUT01	441	3437	3089	12/28/16	4/6/17	Contig	Robert Koch Institute	SAMN06112606	GCA_001922625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/625/GCA_001922625.1_ASM192262v1	-	IHIT27630
Acinetobacter gyllenbergii	134534	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	4.30865	40.9	-	BBTK01	46	4189	4028	2/17/15	4/6/17	Contig	National Institute of Technology and Evaluation	SAMD00019877	GCA_000931695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/695/GCA_000931695.1_ASM93169v1	-	GTC 14627
Acinetobacter guillouiae	106649	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	4.84278	38.1	-	BBRY01	72	4644	4481	1/21/15	4/6/17	Contig	National Institute of Technology and Evaluation	SAMD00018638	GCA_000829655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/655/GCA_000829655.1_ASM82965v1	-	KCTC 23200
Mycoplasma sp. CAG:611	1262905	PRJEB959	206884	Terrabacteria group	Tenericutes	0.927925	24.2	-	CBBK01	56	976	943	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138596	GCA_000434175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/175/GCA_000434175.1_MGS611	-	-
Hafnia paralvei	546367	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.91437	48	-	NWFL01	7	4606	4299	9/19/17	9/21/17	Contig	US Food and Drug Administration 	SAMN04875567	GCA_002313145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/145/GCA_002313145.1_ASM231314v1	-	FDAARGOS_230
Serratia liquefaciens	614	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.1645	55.4	-	JVQG01	40	4847	4694	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197392	GCA_001062925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/925/GCA_001062925.1_ASM106292v1	26230489	20_SPLY
Yersinia pseudotuberculosis	633	PRJNA243514	243514	Proteobacteria	Gammaproteobacteria	4.80659	47.6	chromosome:NZ_CP008943.1/CP008943.1	-	1	4433	4150	9/9/14	4/2/17	Complete Genome	Los Alamos National Laboratory	SAMN02906921	GCA_000750315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/315/GCA_000750315.1_ASM75031v1	25342679	ATCC 6904
Leucobacter sp. G161	663704	PRJNA305548	305548	Terrabacteria group	Actinobacteria	3.55419	65.3	-	LOHP01	109	3328	3161	12/24/15	4/16/17	Contig	"College of Life Science and Technology, Huazhong Agricultural University"	SAMN04328317	GCA_001482305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/305/GCA_001482305.1_ASM148230v1	26893433	G161
Brochothrix thermosphacta	2756	PRJNA338887	338887	Terrabacteria group	Firmicutes	2.55762	36.3	-	MDLO01	68	2446	2346	8/29/16	4/5/17	Contig	CSIRO Agriculture and Food; Food Safety and Stability Group	SAMN05567453	GCA_001715715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/715/GCA_001715715.1_ASM171571v1	-	Bth-7808
Stenotrophomonas rhizophila	216778	PRJNA302550	302550	Proteobacteria	Gammaproteobacteria	6.5266	61.8	-	LNNI01	30	5898	5712	1/29/16	1/29/16	Scaffold	Oklahoma State Universtiy	SAMN04274762	GCA_001542955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/955/GCA_001542955.1_ASM154295v1	-	Simmons01
Pseudomonas lundensis	86185	PRJEB16161	348917	Proteobacteria	Gammaproteobacteria	5.00834	58.7	-	FNLA01	2	4672	4411	10/20/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04490192	GCA_900103705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/705/GCA_900103705.1_IMG-taxon_2639762560_annotated_assembly	-	BS3654
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.8551	58.9	-	LNWB01	49	4639	4515	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339838	GCA_001681255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/255/GCA_001681255.1_ASM168125v1	-	F2368
Corynebacterium stationis	1705	PRJNA312049	312049	Terrabacteria group	Actinobacteria	2.73842	54.7	-	LSTQ01	28	2560	2430	5/13/16	4/12/17	Contig	Institute of Microbial Technology	SAMN04492849	GCA_001643075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/075/GCA_001643075.1_ASM164307v1	-	GA-15
Rhodococcus qingshengii	334542	PRJNA323519	323519	Terrabacteria group	Actinobacteria	6.71226	62.4	-	LYXB01	25	6278	6096	6/13/16	4/12/17	Contig	RMIT University	SAMN05180531	GCA_001662505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/505/GCA_001662505.1_ASM166250v1	-	CS98
Curtobacterium sp. Leaf183	1736291	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.58078	71.3	-	LMPO01	12	3389	3286	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151671	GCA_001424385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/385/GCA_001424385.1_Leaf183	26633631	Leaf183
Streptomyces rimosus subsp. rimosus	132474	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.59331	71.9	-	JOBW01	190	8317	7917	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645403	GCA_000717815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/815/GCA_000717815.1_ASM71781v1	-	NRRL WC-3924
Alloscardovia omnicolens	419015	PRJNA267549	267549	Terrabacteria group	Actinobacteria	1.79297	46.9	-	JWAI01	30	1549	1448	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197130	GCA_001053985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/985/GCA_001053985.1_ASM105398v1	26230489	1173_BLON
Lachnobacterium bovis	140626	PRJEB16988	351115	Terrabacteria group	Firmicutes	2.53571	30.9	-	FOGW01	66	2346	2178	10/29/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910429	GCA_900111325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/325/GCA_900111325.1_IMG-taxon_2593339159_annotated_assembly	-	S1b
Butyrivibrio sp. AC2005	1280672	PRJNA185695	185695	Terrabacteria group	Firmicutes	5.12637	40.1	-	AUJI01	74	4667	4463	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440667	GCA_000424145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/145/GCA_000424145.1_ASM42414v1	-	AC2005
Bifidobacterium pseudolongum subsp. globosum	1690	PRJNA239856	239856	Terrabacteria group	Actinobacteria	1.93525	63.4	-	JGZG01	26	1644	1512	8/18/14	4/2/17	Contig	University of Parma	SAMN02673444	GCA_000741295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/295/GCA_000741295.1_Bifpse_sub.glo	"2,508,549,325,107,960"	LMG 11569
Ensifer sp. Root127	1736440	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	7.89072	61	-	LMDX01	54	7578	7172	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155709	GCA_001425225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/225/GCA_001425225.1_Root127	26633631	Root127
Lysobacter sp. Root690	1736588	PRJNA297942	297942	Proteobacteria	Gammaproteobacteria	6.29605	66.1	-	LMHM01	18	5161	5033	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155857	GCA_001427785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/785/GCA_001427785.1_Root690	26633631	Root690
Streptomyces albulus	68570	PRJNA317587	317587	Terrabacteria group	Actinobacteria	7.64204	73.2	-	LWBU01	413	6828	6518	5/18/16	3/13/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN04621598	GCA_001646665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/646/665/GCA_001646665.1_ASM164666v1	-	B-3066
Micrococcus sp. CH7	1770210	PRJNA305943	305943	Terrabacteria group	Actinobacteria	2.51046	73	-	LOSQ01	46	2341	2223	3/21/16	4/17/17	Scaffold	CINVESTAV-Langebio	SAMN04335744	GCA_001595485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/485/GCA_001595485.1_ASM159548v1	-	CH7
Staphylococcus pasteuri	45972	PRJEB17901	353829	Terrabacteria group	Firmicutes	2.61389	31.5	-	FPKT01	25	2599	2455	11/18/16	4/14/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03097721	GCA_900119855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/855/GCA_900119855.1_IMG-taxon_2600254943_annotated_assembly	-	NFIX07
Trueperella pyogenes MS249	1448141	PRJNA234486	234486	Terrabacteria group	Actinobacteria	2.21662	59.8	-	JALQ01	142	2017	1879	3/21/14	4/2/17	Contig	iPUD	SAMN02951934	GCA_000599565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/565/GCA_000599565.1_TruePyoMS2391.0	24762932	MS249
Streptomyces lavendulae subsp. lavendulae	58340	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.58856	71.9	-	JOEX01	158	8436	8028	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645249	GCA_000721155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/155/GCA_000721155.1_ASM72115v1	-	NRRL B-2775
Sporosarcina ureae DSM 2281	1123290	PRJNA188898	188898	Terrabacteria group	Firmicutes	3.31865	41.4	-	AUDQ01	35	3319	3172	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441542	GCA_000425545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/545/GCA_000425545.1_ASM42554v1	-	DSM 2281
Brachyspira hampsonii 30599	1287056	PRJNA187424	187424	Spirochaetes	Spirochaetia	2.94316	27.8	-	AOMM01	612	2770	2736	1/31/13	1/8/14	Contig	University of Saskatchewan	SAMN02471936	GCA_000334935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/935/GCA_000334935.1_brachy30599_1.0	-	30599
Leifsonia sp. 21MFCrub1.1	1798223	PRJEB16667	349897	Terrabacteria group	Actinobacteria	3.93788	70.3	chromosome I:NZ_LT629867.1/LT629867.1	-	1	3755	3658	10/21/16	7/28/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04515680	GCA_900107895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/895/GCA_900107895.1_IMG-taxon_2639762661_annotated_assembly	-	21MFCrub1.1
Sphingopyxis sp. Root154	1736476	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	4.72694	64.5	-	LMGI01	5	4469	4338	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155745	GCA_001427105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/105/GCA_001427105.1_Root154	26633631	Root154
Pseudomonas poae	200451	PRJNA338673	338673	Proteobacteria	Gammaproteobacteria	5.99636	60.4	-	MDFK01	84	5507	5189	9/18/16	4/13/17	Contig	Ottawa Research and Development Center	SAMN05560560	GCA_001730605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/605/GCA_001730605.1_ASM173060v1	-	LMG 21465
Halorubrum ezzemoulense	337243	PRJNA232799	232799	Euryarchaeota	Halobacteria	3.70247	66.4	-	NHOW01	238	3750	3376	8/15/17	8/17/17	Scaffold	University of Conn.	SAMN02716048	GCA_002252725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/725/GCA_002252725.1_ASM225272v1	24782836	LD3
Treponema pedis isoM1224	1290995	PRJNA188679	188679	Spirochaetes	Spirochaetia	3.46652	37	-	AOTR01	889	3234	2793	9/6/13	4/1/17	Contig	Swedish University of Agricultural Sciences	SAMN02379489	GCA_000465075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/075/GCA_000465075.1_Treponema_pedis_isoM1224	23977007	isoM1224
Kocuria sp. SM24M-10	1660349	PRJNA285175	285175	Terrabacteria group	Actinobacteria	4.34699	72.3	-	LDNX01	177	4123	3859	6/15/15	4/10/17	Contig	Lab. Biologia Molecular Ambiental	SAMN03732514	GCA_001027955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/955/GCA_001027955.1_ASM102795v1	26981384	SM24M-10
Desulfobulbus sp. Dsb5	1292025	PRJNA188739	188739	Proteobacteria	delta/epsilon subdivisions	0.956973	59.7	-	APCO01	182	-	-	5/31/13	7/29/15	Contig	Oak Ridge National Laboratory	SAMN02470755	GCA_000403885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/885/GCA_000403885.1_Dsb5	23555659	Dsb5
Pseudomonas denitrificans (nomen rejiciendum)	43306	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.80051	66.2	-	JVWF01	244	6573	6263	7/10/15	5/30/17	Scaffold	University of Washington	SAMN03197237	GCA_001060745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/745/GCA_001060745.1_ASM106074v1	26230489	1269_PDEN
Mycobacterium yongonense	1203599	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.58616	68	-	MBDX01	300	5413	5008	7/15/16	4/13/17	Contig	JCVI	SAMN04634182	GCA_001686655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/655/GCA_001686655.1_ASM168665v1	-	1099801.4
Gluconobacter thailandicus	257438	PRJNA288385	288385	Proteobacteria	Alphaproteobacteria	3.43131	56.2	-	LHZS01	107	3207	3033	3/7/16	4/12/17	Contig	Ghent University	SAMN03799290	GCA_001580935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/935/GCA_001580935.1_ASM158093v1	-	LMG 23137
Comamonas sp. UBA2122	1946390	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	2.92286	58.7	-	DCYA01	37	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450347	GCA_002331725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/725/GCA_002331725.1_ASM233172v1	28894102	-
Pseudomonas veronii	76761	PRJNA272785	272785	Proteobacteria	Gammaproteobacteria	6.64982	61.1	-	JXWQ02	2	6088	5889	2/12/15	4/10/17	Scaffold	Instituto de Investigaciones Agropecuarias - Chile	SAMN03286965	GCA_000836475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/836/475/GCA_000836475.2_R4V2	-	R4
Nitrosospira sp. Nsp18	1855334	PRJEB16264	348872	Proteobacteria	Betaproteobacteria	3.13424	52.6	-	FMWY01	62	2882	2739	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216315	GCA_900103145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/145/GCA_900103145.1_IMG-taxon_2671180080_annotated_assembly	-	Nsp18
Bacillus flexus NBRC 15715	1348625	PRJDB1313	231370	Terrabacteria group	Firmicutes	3.90616	37.6	-	BCVD01	259	4007	3842	2/27/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00046996	GCA_001591565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/565/GCA_001591565.1_ASM159156v1	-	NBRC 15715
Sporosarcina sp. ZBG7A	1582223	PRJNA269689	269689	Terrabacteria group	Firmicutes	3.53458	41.9	-	JWIB01	78	3444	3370	1/2/15	4/10/17	Contig	University of Malaya	SAMN03265391	GCA_000813425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/425/GCA_000813425.1_ASM81342v1	-	ZBG7A
Phaeobacter sp. CECT 7735	1715693	PRJEB10701	301514	Proteobacteria	Alphaproteobacteria	4.35832	55.7	-	CYTW01	12	4064	3983	11/8/15	4/11/17	Contig	UVEG	SAMEA3542137	GCA_001458215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/215/GCA_001458215.1_Phaeobacter_sp._CECT7735_Spades_Prokka	-	CECT 7735
Stappia sp. TSB10GB4	2003584	PRJEB20987	395448	Proteobacteria	Alphaproteobacteria	5.18289	67.5	-	FYAV01	91	-	-	7/22/17	7/22/17	Contig	Griffith University	SAMEA104113275	GCA_900185745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/745/GCA_900185745.1_TSB10GB4_Assembly_1	-	-
uncultured Butyricicoccus sp.	1193532	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.95201	53.7	-	FMGD01	60	2751	2693	8/16/16	8/16/16	Scaffold	SC	SAMEA3545389	GCA_900066795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/795/GCA_900066795.1_14207_7_49	-	-
Variovorax boronicumulans	436515	PRJNA341585	341585	Proteobacteria	Betaproteobacteria	7.1381	68	-	MRCN01	52	6567	6407	9/15/17	9/18/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05914512	GCA_002303955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/955/GCA_002303955.1_ASM230395v1	-	ACN3
Helicobacter sp. 11S02596-1	1476194	PRJNA344861	344861	Proteobacteria	delta/epsilon subdivisions	1.97077	41.4	-	MLAM01	49	1838	1767	8/28/17	8/30/17	Contig	Utrecht University	SAMN05846499	GCA_002272825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/825/GCA_002272825.1_ASM227282v1	28827684	11S02596-1
Bordetella hinzii 1277	1331255	PRJNA202158	202158	Proteobacteria	Betaproteobacteria	4.87311	66.9	-	JHES01	110	4672	4466	4/30/14	4/2/17	Contig	JCVI	SAMN02263902	GCA_000657695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/695/GCA_000657695.1_gbhv01	-	1277
Microbispora sp. GKU 823	1652100	PRJNA374786	374786	Terrabacteria group	Actinobacteria	9.4301	71.3	-	MWJN01	262	8902	7503	3/14/17	3/16/17	Contig	Actinobacterial Research Unit	SAMN06335521	GCA_002027145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/145/GCA_002027145.1_ASM202714v1	-	GKU 823
Faecalibacterium sp. An58	1965648	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.93166	60.7	-	NFHX01	85	2831	2654	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473740	GCA_002161515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/515/GCA_002161515.1_ASM216151v1	-	An58
Serratia fonticola UTAD54	1379259	PRJNA213447	213447	Proteobacteria	Gammaproteobacteria	5.95342	53.5	-	AUZV01	133	5546	5311	9/18/13	4/2/17	Contig	Rede Paraense de genômica e proteômica	SAMN02471348	GCA_000476315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/315/GCA_000476315.1_UTAD54_1	24285645	UTAD54
Vibrio owensii ATCC 25919	1280000	PRJDB720	202997	Proteobacteria	Gammaproteobacteria	5.80452	45.6	-	BANZ01	174	5294	5112	5/14/13	4/1/17	Contig	University of Miyazaki	SAMD00036653	GCA_000400225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/225/GCA_000400225.1_ASM40022v1	23710045	ATCC 25919
Bifidobacterium thermacidophilum subsp. porcinum DSM 17755	1435463	PRJNA237576	237576	Terrabacteria group	Actinobacteria	2.06257	60.2	-	JDTQ01	35	1607	1504	11/4/14	4/9/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442008	GCA_000771045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/045/GCA_000771045.1_DSM-17755	25658111	DSM 17755
Burkholderia contaminans	488447	PRJNA335409	335409	Proteobacteria	Betaproteobacteria	10.3526	65.7	-	MCAU02	4	9624	9173	10/12/16	4/17/17	Contig	National Center for Toxicological Research (NCTR)/US FDA	SAMN05441496	GCA_001758385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/385/GCA_001758385.2_ASM175838v2	-	LMG 23361
Roseburia sp. CAG:45	1262947	PRJEB886	206845	Terrabacteria group	Firmicutes	2.53726	41.1	-	CBET01	72	2339	2315	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138528	GCA_000432815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/815/GCA_000432815.1_MGS45	-	-
Methanoculleus sp. EBM-46	1918499	PRJNA315143	315143	Euryarchaeota	Methanomicrobia	2.68778	60.3	-	MPOY01	657	-	-	12/9/16	12/9/16	Contig	UC Berkeley	SAMN06018915	GCA_001896715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/715/GCA_001896715.1_ASM189671v1	-	-
Dialister sp. UBA1703	1946415	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.06939	52.1	-	DCJJ01	179	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451238	GCA_002320515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/515/GCA_002320515.1_ASM232051v1	28894102	-
Sutterella sp. 54_7	1897023	PRJNA321218	321218	Proteobacteria	Betaproteobacteria	1.82279	54.1	-	MNTX01	345	1736	925	12/23/16	12/23/16	Scaffold	None	SAMN05717307	GCA_001917205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/205/GCA_001917205.1_ASM191720v1	27819664	-
Acetobacter sp. DsW_063	1514894	PRJNA253128	253128	Proteobacteria	Alphaproteobacteria	3.03347	60.1	-	JOPL01	176	2685	2566	5/19/17	5/24/17	Contig	Cornell University	SAMN02866240	GCA_002153745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/745/GCA_002153745.1_ASM215374v1	-	DsW_063
Odoribacter sp. 43_10	1897010	PRJNA321218	321218	FCB group	Bacteroidetes/Chlorobi group	3.97026	43.3	-	MNQX01	119	3473	2992	12/23/16	12/23/16	Scaffold	None	SAMN05717229	GCA_001915655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/655/GCA_001915655.1_ASM191565v1	27819664	-
Vibrio cholerae M66-2	579112	PRJNA32851	32851	Proteobacteria	Gammaproteobacteria	3.93891	47.5875	chromosome I:NC_012578.1/CP001233.1; chromosome II:NC_012580.1/CP001234.1	-	2	3754	3549	4/20/09	3/22/17	Complete Genome	TEDA School of Biological Sciences and Biotechnology	SAMN02603897	GCA_000021605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/605/GCA_000021605.1_ASM2160v1	19115014	M66-2
Cellulophaga baltica	76594	PRJEB15816	347773	FCB group	Bacteroidetes/Chlorobi group	4.71857	34.5	-	FNBD01	59	4168	4043	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487992	GCA_900102165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/165/GCA_900102165.1_IMG-taxon_2622736528_annotated_assembly	-	DSM 24729
Bradyrhizobium diazoefficiens SEMIA 5080	754504	PRJNA47329	47329	Proteobacteria	Alphaproteobacteria	9.08553	64	-	ADOU02	13	8726	8252	4/28/14	4/9/17	Contig	LNCC-Embrapa Soja	SAMN02739028	GCA_000648595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/595/GCA_000648595.2_ASM64859v2	24888481	SEMIA 5080
Leeuwenhoekiella sp. UBA4164	1946746	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.19323	40.7	-	DFVI01	46	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451759	GCA_002380515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/515/GCA_002380515.1_ASM238051v1	28894102	-
Virgibacillus sp. IO3-P2-C2	2024554	PRJNA396975	396975	Terrabacteria group	Firmicutes	3.91616	38.3	-	NPMS01	77	3856	3722	8/22/17	8/24/17	Contig	"Institute of Microbiology, CAS"	SAMN07444817	GCA_002266285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/285/GCA_002266285.1_ASM226628v1	-	IO3-P2-C2
Pantoea dispersa	59814	PRJNA278248	278248	Proteobacteria	Gammaproteobacteria	4.81979	57.7	-	LDSB01	54	4468	4320	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401413	GCA_001476735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/735/GCA_001476735.1_ASM147673v1	26793183	NS389
Franconibacter pulveris LMG 24059	1388747	PRJNA215377	215377	Proteobacteria	Gammaproteobacteria	4.88927	56.6	-	AWFY01	89	4657	4457	8/30/13	4/11/17	Scaffold	"Nottingham Trent University, UK"	SAMN02318530	GCA_000463135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/135/GCA_000463135.2_CroPulLMG24059_1.0	24072872	LMG 24059
Pseudomonas mosselii	78327	PRJNA356481	356481	Proteobacteria	Gammaproteobacteria	5.53645	64.7	-	MRVJ01	67	5018	4871	4/18/17	4/21/17	Contig	institute of microbial technology	SAMN06114602	GCA_002099255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/255/GCA_002099255.1_ASM209925v1	-	WS2-TSB-10
Pseudobutyrivibrio sp. 49	1855344	PRJEB15941	348236	Terrabacteria group	Firmicutes	3.39847	38.9	-	FNDP01	45	3109	2982	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421493	GCA_900100545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/545/GCA_900100545.1_IMG-taxon_2651870321_annotated_assembly	-	49
Kandleria vitulina	1630	PRJEB16170	348949	Terrabacteria group	Firmicutes	2.10412	35	-	FNGT01	49	2150	2028	10/20/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216520	GCA_900103115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/115/GCA_900103115.1_IMG-taxon_2654588126_annotated_assembly	-	WCC7
Bacillus toyonensis	155322	PRJNA397516	397516	Terrabacteria group	Firmicutes	5.95028	35.3	-	NRSR01	21	6336	5335	9/8/17	9/8/17	Contig	Yeungnam University	SAMN07550340	GCA_002287835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/835/GCA_002287835.1_ASM228783v1	-	TYU4
Smithella sp. SC_K08D17	1487949	PRJNA244598	244598	Proteobacteria	delta/epsilon subdivisions	2.26738	43.2	-	JMED01	591	1929	1858	1/8/15	5/5/15	Contig	University of Alberta	SAMN02730064	GCA_000816445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/445/GCA_000816445.2_ASM81644v2	-	-
Asticcacaulis sp. 32-58-5	1970317	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	1.92026	57.6	-	NCDC01	984	2374	2169	8/16/17	8/16/17	Scaffold	None	SAMN06622382	GCA_002279985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/985/GCA_002279985.1_ASM227998v1	-	-
Yersinia pestis	632	PRJNA240106	240106	Proteobacteria	Gammaproteobacteria	4.77797	47.5655	chromosome 1:NZ_CP009844.1/CP009844.1; plasmid pCD:NZ_CP009842.1/CP009842.1; plasmid pMT:NZ_CP009843.1/CP009843.1	-	3	4568	4317	2/9/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03161124	GCA_000834775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/775/GCA_000834775.1_ASM83477v1	25931590	Dodson
Methylibium sp. Root1272	1736441	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	4.20826	69	-	LMDY01	19	4047	3933	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04155710	GCA_001425905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/905/GCA_001425905.1_Root1272	26633631	Root1272
Salinivibrio sp. AR647	1909438	PRJNA368796	368796	Proteobacteria	Gammaproteobacteria	3.28104	49.3	-	MUFE01	22	3041	2907	2/14/17	4/17/17	Contig	Universidad de Sevilla	SAMN06272991	GCA_001995415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/415/GCA_001995415.1_ASM199541v1	-	AR647
Porphyromonas crevioricanis	393921	PRJNA253607	253607	FCB group	Bacteroidetes/Chlorobi group	2.16109	45.5	-	JQJC01	30	1875	1766	10/27/14	4/9/17	Contig	UC Davis	SAMN03004339	GCA_000768975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/975/GCA_000768975.1_ASM76897v1	25858832	COT-253 OH1447
Candidatus Synechococcus spongiarum SP3	1604020	PRJNA255756	255756	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.12996	60.9	-	JXQG01	117	2146	1694	5/14/15	7/8/15	Contig	Haifa University- The Leon H. Charney School of Marine Sciences	SAMN03003633	GCA_001007665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/665/GCA_001007665.1_ASM100766v1	26037118	-
Pseudoalteromonas lipolytica	570156	PRJEB17578	351995	Proteobacteria	Gammaproteobacteria	4.53902	41.5	-	FPAZ01	52	4044	3908	11/2/16	4/14/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487854	GCA_900116435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/435/GCA_900116435.1_IMG-taxon_2617270886_annotated_assembly	-	CGMCC 1.8499
Aeromonas dhakensis	196024	PRJEB7020	267792	Proteobacteria	Gammaproteobacteria	4.69234	61.9	-	CDBP01	78	4384	4157	11/24/14	4/10/17	Scaffold	UCONNMISEQ	SAMEA2752427	GCA_000819705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/705/GCA_000819705.1_PRJEB7020	-	CECT 7289
Staphylococcus cohnii	29382	PRJNA316869	316869	Terrabacteria group	Firmicutes	2.67226	32.3	-	LWAC01	282	2669	2413	5/24/16	4/5/17	Contig	UC Berkeley	SAMN04591361	GCA_001650645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/645/GCA_001650645.1_ASM165064v1	-	H62
Candidatus Microthrix parvicella	41950	PRJNA348753	348753	Terrabacteria group	Actinobacteria	3.70406	66.7	-	DFWV01	137	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453215	GCA_002381105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/105/GCA_002381105.1_ASM238110v1	28894102	-
Luteimonas sp. ANT-B3E	1844759	PRJNA319586	319586	Proteobacteria	Gammaproteobacteria	2.81442	70	-	LXQJ01	57	-	-	7/12/16	7/12/16	Scaffold	CMEG University of Pretoria	SAMN04932543	GCA_001683895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/895/GCA_001683895.1_ANT-B3E	-	-
Bordetella trematum	123899	PRJEB2850	204590	Proteobacteria	Betaproteobacteria	4.4447	65.6	-	FKBR01	50	4137	4006	4/6/16	4/12/17	Scaffold	SC	SAMEA1982609	GCA_900078335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/335/GCA_900078335.1_7642_7_39	-	NCTC12995
Bradyrhizobium yuanmingense	108015	PRJEB14983	336135	Proteobacteria	Alphaproteobacteria	8.20152	63.8	-	FMAE01	108	7826	7334	8/3/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487810	GCA_900094575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/575/GCA_900094575.1_IMG-taxon_2617270741_annotated_assembly	-	CCBAU 10071
Vibrio cholerae	666	PRJNA301765	301765	Proteobacteria	Gammaproteobacteria	4.01486	47.5589	chromosome 1:NZ_CP013315.1/CP013315.1; chromosome 2:NZ_CP013316.1/CP013316.1	-	2	3851	3645	11/30/16	3/28/17	Complete Genome	Nankai University	SAMN04256435	GCA_001887635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/635/GCA_001887635.1_ASM188763v1	27849586	M2140
Tenacibaculum sp. MAR_2010_89	1250198	PRJEB16495	349421	FCB group	Bacteroidetes/Chlorobi group	4.17291	29.3	-	FNUB01	5	3672	3535	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487765	GCA_900105985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/985/GCA_900105985.1_IMG-taxon_2634166900_annotated_assembly	-	Mar_2010_89
Pseudomonas corrugata	47879	PRJNA290284	290284	Proteobacteria	Gammaproteobacteria	6.16658	60.4	-	LIGO01	442	5589	5090	10/23/15	4/4/17	Scaffold	Technological Educational Institute of Crete	SAMN03879925	GCA_001412195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/195/GCA_001412195.1_ASM141219v1	26300874	CFBP5403
Aphanizomenon flos-aquae WA102	1710896	PRJNA294801	294801	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.94604	39.1	-	LJOW01	1160	5747	5296	6/20/16	6/20/16	Contig	Oregon State University	SAMN04028821	GCA_001672105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/105/GCA_001672105.1_ASM167210v1	-	-
Lebetimonas sp. JS138	990072	PRJNA208428	208428	Proteobacteria	delta/epsilon subdivisions	1.68867	31.5	-	ATHT01	5	1837	1734	1/24/14	4/17/17	Contig	Marine Biological Lab	SAMN02203849	GCA_000523335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/335/GCA_000523335.1_LebetimonasJS138	24257443	JS138
Streptococcus oralis subsp. dentisani	1458253	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.97755	40.8	-	NCUW01	30	1966	1823	4/18/17	4/21/17	Scaffold	Slagelse Hospital	SAMN06705612	GCA_002096335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/335/GCA_002096335.1_ASM209633v1	27325438	Y_5914_11
Ensifer adhaerens	106592	PRJNA280851	280851	Proteobacteria	Alphaproteobacteria	6.8741	62.8	-	LAZS01	22	6467	6321	2/27/17	3/2/17	Contig	Jishou University	SAMN03470198	GCA_002007205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/205/GCA_002007205.1_ASM200720v1	-	L18
Candidatus Accumulibacter sp. BA-91	1454002	PRJNA236437	236437	Proteobacteria	Betaproteobacteria	4.32282	61.7	-	JDVG02	737	4468	4451	3/3/14	7/28/14	Contig	Australian Centre for Ecogenomics	SAMN02445066	GCA_000585035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/035/GCA_000585035.2_AW09v2	-	-
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	3.07617	34.6	-	LZGM01	129	2774	2629	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179585	GCA_001690195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/195/GCA_001690195.1_ASM169019v1	-	wkB108
Lysinibacillus sp. F5	1700846	PRJNA292439	292439	Terrabacteria group	Firmicutes	4.57364	37.7	-	LKIE01	117	4430	4229	12/24/15	4/11/17	Contig	University of Malaya	SAMN03976055	GCA_001482485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/485/GCA_001482485.1_ASM148248v1	-	F5
Lactobacillus gallinarum	52242	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.03934	36.5	-	NFLP01	93	2089	1867	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473591	GCA_002160975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/975/GCA_002160975.1_ASM216097v1	-	An119
Mycobacterium vulneris	547163	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.99756	66.9	-	MBEH01	106	6739	6568	7/15/16	4/13/17	Contig	JCVI	SAMN04634267	GCA_001686845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/845/GCA_001686845.1_ASM168684v1	-	ACS4093
Photobacterium phosphoreum	659	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.88227	39.2	-	LZFG01	121	4398	4006	6/24/16	4/13/17	Contig	FDA/CFSAN	SAMN04507566	GCA_001676275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/275/GCA_001676275.1_ASM167627v1	-	GCSL-P69
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.09606	41.7	-	FTPY01	2	993	927	3/18/17	3/24/17	Contig	Functional Genomics Genter Zurich	SAMEA4555947	GCA_900149365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/365/GCA_900149365.1_3-29b	-	-
Lactobacillus paralimentarius DSM 13961 = JCM 10707	1423765	PRJDB760	243672	Terrabacteria group	Firmicutes	2.74229	35.1	-	BBAE01	30	2702	2357	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00000409	GCA_001311095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/095/GCA_001311095.1_ASM131109v1	-	JCM 10707
Geobacillus thermocatenulatus	33938	PRJNA354604	354604	Terrabacteria group	Firmicutes	3.3864	52.6	-	NAGD01	230	3561	3287	4/3/17	4/5/17	Scaffold	"Jet Propulsion Laboratory, California Institute of Technology"	SAMN06347032	GCA_002077815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/815/GCA_002077815.1_ASM207781v1	-	SURF-48B
Pseudomonas moraviensis	321662	PRJNA397091	397091	Proteobacteria	Gammaproteobacteria	6.13446	60.3	-	NRSS01	4	5619	5399	9/8/17	9/11/17	Contig	Yeungnam University	SAMN07448239	GCA_002287865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/865/GCA_002287865.1_ASM228786v1	-	TYU5
Lactobacillus kunkeei	148814	PRJNA270964	270964	Terrabacteria group	Firmicutes	1.56713	37	-	JXCX01	14	1510	1421	9/11/15	4/4/17	Scaffold	Uppsala university	SAMN03275715	GCA_001421135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/135/GCA_001421135.1_ASM142113v1	25953738	LAfl
Devosia sp. Root413D1	1736531	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	5.85149	65.4	-	LMEA01	14	5622	5533	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155800	GCA_001425235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/235/GCA_001425235.1_Root413D1	26633631	Root413D1
Mycoplasma hyosynoviae	29559	PRJNA238375	238375	Terrabacteria group	Tenericutes	0.866715	27.1	-	JFKJ01	51	697	629	5/15/14	4/2/17	Contig	"Newport Laboratories, A Sanofi Company"	SAMN02673696	GCA_000691325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/325/GCA_000691325.1_MhyoNPL3v1.0_of_Mycoplasma_hyosynoviae_strain_NPL3_genome	24903877	NPL3
Gemmatimonas sp. SG8_38_2	1703358	PRJNA270657	270657	FCB group	Gemmatimonadetes	2.81454	61.7	-	LJTP01	307	2744	2377	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994177	GCA_001304415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/415/GCA_001304415.1_ASM130441v1	25922666	-
Edwardsiella piscicida	1263550	PRJDB1727	252568	Proteobacteria	Gammaproteobacteria	3.83865	59.3	-	BAYU01	38	3490	3234	5/14/14	4/9/17	Contig	Kochi University	SAMD00000404	GCA_000711175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/175/GCA_000711175.1_ASM71117v1	24926054	RSB1309
Pseudomonas simiae	321846	PRJEB17091	351709	Proteobacteria	Gammaproteobacteria	6.23985	60.3	-	FOKB01	23	5775	5618	10/31/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216248	GCA_900111895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/895/GCA_900111895.1_IMG-taxon_2663762772_annotated_assembly	-	CCUG 50988
Streptomyces fradiae	1906	PRJNA293375	293375	Terrabacteria group	Actinobacteria	6.09049	74.2	-	MUNC01	1555	5501	4662	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06282440	GCA_002154445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/445/GCA_002154445.1_ASM215444v1	-	NRRL B-1195
Bosea sp. UNC402CLCol	1510531	PRJNA252874	252874	Proteobacteria	Alphaproteobacteria	5.61334	66.5	-	JQJJ01	16	5294	5171	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02865415	GCA_000745475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/475/GCA_000745475.1_ASM74547v1	-	UNC402CLCol
Kitasatospora sp. MBT66	1444769	PRJNA233559	233559	Terrabacteria group	Actinobacteria	10.382	72.7	-	JAIY01	44	9181	8377	6/19/14	4/11/17	Scaffold	"Institute of Biology, Leiden University"	SAMN02570147	GCA_000710405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/405/GCA_000710405.2_KspMBT66_1.0	24958203	MBT66
Synergistes jonesii	2754	PRJNA258243	258243	Synergistetes	Synergistia	2.63614	56.4	-	JPZQ01	77	2530	2425	10/11/16	4/13/17	Contig	CSIRO	SAMN02991087	GCA_001757495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/495/GCA_001757495.1_ASM175749v1	-	100-6
Chromobacterium haemolyticum	394935	PRJNA369804	369804	Proteobacteria	Betaproteobacteria	4.98579	62.3	-	MUKV01	84	4636	4449	4/6/17	4/8/17	Contig	Centers for Disease Control and Prevention	SAMN06294331	GCA_002081855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/855/GCA_002081855.1_ASM208185v1	-	H5244
Vibrio cholerae O395	345073	PRJNA15667	15667	Proteobacteria	Gammaproteobacteria	4.13232	47.5586	chromosome 1:NC_009456.1/CP000626.1; chromosome 2:NC_009457.1/CP000627.1	-	2	4023	3814	5/8/07	5/19/17	Complete Genome	TIGR	SAMN02604040	GCA_000016245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/245/GCA_000016245.1_ASM1624v1	-	O395
Streptomyces californicus	67281	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.38147	70.8	-	JOAD01	103	-	-	7/1/14	5/13/16	Scaffold	University of Illinois	SAMN02645358	GCA_000716065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/065/GCA_000716065.1_ASM71606v1	-	NRRL ISP-5058
Saccharothrix sp. CB00851	1835005	PRJNA293172	293172	Terrabacteria group	Actinobacteria	9.304	71.3	-	LWLC01	66	8367	8032	12/15/16	4/17/17	Scaffold	The Scripps Research Institute	SAMN04857094	GCA_001905065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/065/GCA_001905065.1_ASM190506v1	27999165	CB00851
Kitasatospora aureofaciens	1894	PRJNA281502	281502	Terrabacteria group	Actinobacteria	9.07869	72.7	-	LBHA01	989	8263	7376	4/22/15	8/22/17	Contig	USDA/ARS/NCAUR	SAMN03491044	GCA_000978515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/978/515/GCA_000978515.1_ASM97851v1	-	NRRL 2209
Streptomyces albidoflavus	1886	PRJNA398273	398273	Terrabacteria group	Actinobacteria	6.97804	73	-	NVPX01	1028	6703	5631	9/20/17	9/22/17	Contig	The University of Queensland 	SAMN07505024	GCA_002317025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/025/GCA_002317025.1_CMB-CS138	-	138
Shinella sp. 65-6	1895831	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	5.12187	63.4	-	MKSC01	885	5259	3393	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660519	GCA_001898065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/065/GCA_001898065.1_ASM189806v1	-	-
Alteromonas australica	589873	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.14316	44.9	-	DCBZ01	83	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06457032	GCA_002314095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/095/GCA_002314095.1_ASM231409v1	28894102	-
Vibrio metoecus	1481663	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.98248	46.9	-	LBGO01	64	3775	3583	10/22/15	4/4/17	Contig	University of Alberta	SAMN03488024	GCA_001402495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/495/GCA_001402495.1_ASM140249v1	26454015	YB4D01
Caballeronia sordidicola	196367	PRJNA355627	355627	Proteobacteria	Betaproteobacteria	8.33421	59.4	-	NBTZ01	182	7868	7293	5/16/17	5/24/17	Contig	Pukyong National University	SAMN06092826	GCA_002141485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/485/GCA_002141485.1_ASM214148v1	-	PAMC 26577
Nonlabens ulvanivorans	906888	PRJDB1692	252065	FCB group	Bacteroidetes/Chlorobi group	3.21696	35.1	-	BBMM01	34	3034	2278	9/11/14	4/9/17	Contig	The University of Tokyo	SAMD00017335	GCA_000755325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/325/GCA_000755325.1_ASM75532v1	25395639	JCM 19314
Cellulosimicrobium sp. KWT-B	1981152	PRJNA383651	383651	Terrabacteria group	Actinobacteria	4.41209	74.6	-	NEDO01	16	3898	3774	5/10/17	5/22/17	Contig	Osaka Ohtani University	SAMN06768624	GCA_002127155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/155/GCA_002127155.1_ASM212715v1	-	KWT-B
Staphylococcus agnetis	985762	PRJNA383665	383665	Terrabacteria group	Firmicutes	2.52798	35.4	-	NEFX01	68	2511	2400	5/16/17	5/24/17	Contig	University of Copenhagen	SAMN06771150	GCA_002145465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/145/465/GCA_002145465.1_ASM214546v1	-	723_310714_2_2_spleen
Serratia nematodiphila	458197	PRJEB15730	347686	Proteobacteria	Gammaproteobacteria	5.17907	59.6	-	FMUT01	27	4923	4757	10/17/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02927935	GCA_900101535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/535/GCA_900101535.1_IMG-taxon_2596583578_annotated_assembly	-	CGMCC 1.6853
Bifidobacterium scardovii	158787	PRJNA267549	267549	Terrabacteria group	Actinobacteria	3.12129	64.8	-	JULC01	150	2535	2354	7/10/15	4/10/17	Contig	University of Washington	SAMN03198202	GCA_001059475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/475/GCA_001059475.1_ASM105947v1	26230489	981_BLON
Acetobacter malorum	178901	PRJNA288385	288385	Proteobacteria	Alphaproteobacteria	3.2815	58	-	LHZZ01	654	3222	2785	3/7/16	4/12/17	Contig	Ghent University	SAMN03799302	GCA_001581085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/085/GCA_001581085.1_ASM158108v1	-	LMG 1604
Luteibacter sp. UNCMF331Sha3.1	1502760	PRJEB16884	351000	Proteobacteria	Gammaproteobacteria	4.12467	66.9	-	FOBU01	10	3665	3582	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02800694	GCA_900109915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/915/GCA_900109915.1_IMG-taxon_2593339239_annotated_assembly	-	UNCMF331Sha3.1
Sulfuricurvum sp. RIFCSPLOWO2_02_43_6	1802244	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.82112	43.1	-	MIBQ01	548	2078	1602	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313973	GCA_001829595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/595/GCA_001829595.1_ASM182959v1	27774985	-
Bacillus thermoamylovorans	35841	PRJNA270599	270599	Terrabacteria group	Firmicutes	3.81627	37.3	-	JXLR01	162	3664	3415	2/4/15	4/10/17	Scaffold	University of Groningen	SAMN03267282	GCA_000832245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/245/GCA_000832245.1_ASM83224v1	25814599	B4064
Thermoactinomyces sp. DSM 45891	1761907	PRJEB17913	353815	Terrabacteria group	Firmicutes	2.98519	41.5	-	FPJZ01	47	2968	2798	11/17/16	4/14/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487866	GCA_900119485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/485/GCA_900119485.1_IMG-taxon_2619618957_annotated_assembly	-	DSM 45891
Vibrio cholerae O395	345073	PRJNA32853	32853	Proteobacteria	Gammaproteobacteria	4.1353	47.5582	chromosome I:NC_012582.1/CP001235.1; chromosome II:NC_012583.1/CP001236.1	-	2	4027	3818	4/20/09	5/19/17	Complete Genome	TEDA School of Biological Sciences and Biotechnology	SAMN02603898	GCA_000021625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/625/GCA_000021625.1_ASM2162v1	19115014	O395
Achromobacter sp. HMSC15D03	1581105	PRJNA269874	269874	Proteobacteria	Betaproteobacteria	6.6338	67.5	-	LTZT01	356	6176	5765	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03604112	GCA_001807115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/115/GCA_001807115.1_ASM180711v1	-	HMSC15D03
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	7.08888	44.2	-	MKQK01	130	6321	6155	1/18/17	4/6/17	Contig	Cornell University	SAMN05772513	GCA_001954345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/345/GCA_001954345.1_ASM195434v1	-	FSL F4-0152
Elizabethkingia miricola	172045	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	4.4291	35.9	-	MAGX01	9	4042	3947	3/8/17	3/11/17	Contig	CDC	SAMN05254999	GCA_002023335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/335/GCA_002023335.1_ASM202333v1	-	CSID_3000517120
Pseudomonas mediterranea	183795	PRJNA290284	290284	Proteobacteria	Gammaproteobacteria	6.29886	61.2	-	LIHG01	89	5577	5424	10/23/15	4/11/17	Scaffold	Technological Educational Institute of Crete	SAMN03879930	GCA_001412045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/045/GCA_001412045.1_ASM141204v1	26300874	CFBP5444
Bacillus aryabhattai	412384	PRJNA277418	277418	Terrabacteria group	Firmicutes	5.42136	37.8	-	LDWN01	48	5606	5435	6/24/15	4/3/17	Contig	University of Malaya	SAMN03751785	GCA_001038965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/965/GCA_001038965.1_ASM103896v1	-	LK25
Bdellovibrio sp. UBA4095	1961378	PRJNA348753	348753	Proteobacteria	Oligoflexia	3.33164	45.3	-	DFXZ01	14	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06456331	GCA_002381805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/805/GCA_002381805.1_ASM238180v1	28894102	-
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.68832	50.9	-	MPQF01	50	2606	2513	3/6/17	3/9/17	Contig	Harvard University	SAMN06016252	GCA_002020415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/415/GCA_002020415.1_ASM202041v1	-	-
Citrobacter braakii	57706	PRJNA360855	360855	Proteobacteria	Gammaproteobacteria	5.44678	51.7595	plasmid pSCC4:NZ_CP021078.1/CP021078.1	MTCP01	125	5553	5209	1/15/17	5/31/17	Contig	Sichuan University	SAMN06215934	GCA_001952715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/715/GCA_001952715.2_ASM195271v2	-	SCC4
Clostridium baratii	1561	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.1417	28.1	-	CZAV01	50	3044	2938	10/1/15	4/4/17	Contig	SC	SAMEA3545370	GCA_001406275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/275/GCA_001406275.1_14207_7_30	-	2789STDY5834907
Leisingera sp. ANG-S	1577898	PRJNA269051	269051	Proteobacteria	Alphaproteobacteria	4.5721	62.8	-	JWLM01	68	4369	4247	1/2/15	4/10/17	Scaffold	University of Connecticut	SAMN03246061	GCA_000813885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/885/GCA_000813885.1_ASM81388v1	25755651	ANG-S
Fusobacterium hwasookii ChDC F145	1307441	PRJNA193582	193582	Fusobacteria	Fusobacteriia	2.28026	27	-	ATKE01	164	2200	2041	8/29/13	4/1/17	Contig	Dental School of Chosun University	SAMN02469579	GCA_000455865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/865/GCA_000455865.1_de_novo	24459284	ChDC F145
Pseudomonas frederiksbergensis	104087	PRJEB15108	347745	Proteobacteria	Gammaproteobacteria	6.4533	59.4	-	FMHS01	21	6006	5772	10/10/16	5/31/17	Contig	OAK RIDGE NATIONAL LABORATORY	SAMEA4382858	GCA_900095355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/355/GCA_900095355.1_ASM90009535v1	-	-
Pseudomonas flexibilis JCM 14085	1295129	PRJDB834	243740	Proteobacteria	Gammaproteobacteria	3.35397	65.1	-	BBCY01	1196	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000521	GCA_001312105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/105/GCA_001312105.1_ASM131210v1	-	JCM 14085
Chromobacterium subtsugae	251747	PRJNA280628	280628	Proteobacteria	Betaproteobacteria	5.23268	64.3	-	LCWR01	628	5013	4562	6/5/15	4/3/17	Contig	Midwestern University	SAMN03649652	GCA_001020525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/525/GCA_001020525.1_ASM102052v1	-	MWU2387
Morococcus cerebrosus	1056807	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	2.51926	51.3	-	JVJL01	408	2433	2233	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197569	GCA_001064745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/745/GCA_001064745.1_ASM106474v1	26230489	378_NMEN
Enterobacter ludwigii	299767	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.83692	54.6	-	LEEO01	36	4714	4517	6/9/15	4/3/17	Contig	JCVI	SAMN03732688	GCA_001023245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/245/GCA_001023245.1_ASM102324v1	-	GN02226
Pandoraea apista	93218	PRJEB8563	285634	Proteobacteria	Betaproteobacteria	5.5374	62.7	-	CEWL01	44	5015	4851	6/1/15	4/10/17	Contig	UNIVERSITY OF WARWICK	SAMEA3271083	GCA_001049515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/515/GCA_001049515.1_Pandoraea_assembly_1	-	LMG16407
Winogradskyella sp. WNB302	1915063	PRJNA386414	386414	FCB group	Bacteroidetes/Chlorobi group	3.20395	37	-	NGJN01	20	2901	2845	8/23/17	8/25/17	Contig	Shandong University at Weihai	SAMN06947015	GCA_002266855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/855/GCA_002266855.1_ASM226685v1	-	WNB302
Frigoribacterium sp. Leaf186	1736293	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.43901	71.4	-	LMPQ01	17	3141	3032	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151673	GCA_001423905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/905/GCA_001423905.1_Leaf186	26633631	Leaf186
Mycobacterium immunogenum	83262	PRJNA294421	294421	Terrabacteria group	Actinobacteria	5.64413	64.1	-	LJFP01	43	5647	5477	9/22/15	4/4/17	Contig	US EPA	SAMN04025493	GCA_001296265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/265/GCA_001296265.1_ASM129626v1	-	H060
Aneurinibacillus migulanus	47500	PRJEB6538	292984	Terrabacteria group	Firmicutes	5.98223	43.2	-	CCMJ01	175	5965	5681	8/15/15	4/4/17	Scaffold	ERA7	SAMEA2602737	GCA_001282905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/905/GCA_001282905.1_Assembly_of_Aneurinibacillus_migulanus_Nagano	-	-
Photobacterium kishitanii	318456	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	5.12463	38.7	-	JZTB01	118	4546	4258	3/10/15	4/3/17	Contig	FDA/CFSAN	SAMN03295468	GCA_000950335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/335/GCA_000950335.1_CFSAN029420_01.0	25931609	GCSL-A1-4
Tatlockia micdadei	451	PRJNA285910	285910	Proteobacteria	Gammaproteobacteria	3.27982	40.4	-	LNYM01	19	2946	2849	12/15/15	4/11/17	Scaffold	Tel Aviv University	SAMN04274784	GCA_001467875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/875/GCA_001467875.1_ASM146787v1	26752266	TATLOCK
Moritella viscosa	80854	PRJEB16014	348508	Proteobacteria	Gammaproteobacteria	5.20774	39.3	-	FRDW01	124	4720	4452	12/6/16	4/11/17	Contig	UNIVERSITY OF TROMSO	SAMEA4520407	GCA_900120025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/025/GCA_900120025.1_clc.v6.5.NVI3632.01	-	-
Aliivibrio wodanis	80852	PRJNA302718	302718	Proteobacteria	Gammaproteobacteria	4.66323	38.2	-	LNRL01	90	4284	4106	2/10/16	4/4/17	Contig	University of Cambridge	SAMN04279306	GCA_001557915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/915/GCA_001557915.1_ASM155791v1	-	CL5
Terrabacter sp. 28	1619947	PRJNA275245	275245	Terrabacteria group	Actinobacteria	4.87674	71.4	-	JYOE01	94	4445	4283	3/18/15	4/10/17	Scaffold	Cornell University	SAMN03340297	GCA_000955875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/955/875/GCA_000955875.1_ASM95587v1	-	28
Vulcanisaeta sp. JCM 16161	1295372	PRJDB851	252063	TACK group	Crenarchaeota	2.2866	45.9	-	BBDO01	20	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000532	GCA_001316285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/285/GCA_001316285.1_ASM131628v1	-	JCM 16161
Comamonas thiooxydans	363952	PRJEB10553	293956	Proteobacteria	Betaproteobacteria	5.26863	61.6	-	CYHD01	40	4839	4674	8/27/15	4/11/17	Scaffold	DOE - Joint Genome Institute	SAMN03840638	GCA_001517325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/325/GCA_001517325.1_JGI_assembly	-	DSM 17888
Staphylococcus argenteus	985002	PRJEB6394	256291	Terrabacteria group	Firmicutes	2.70769	32.2	-	CCEN01	11	2660	2505	9/6/14	4/2/17	Contig	WTSI	SAMEA2007998	GCA_000751495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/495/GCA_000751495.1_Sa_M051_MSHR	-	-
Arsukibacterium sp. UBA4203	1946060	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.87588	48.4	-	DFTV01	21	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455422	GCA_002381445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/445/GCA_002381445.1_ASM238144v1	28894102	-
Klebsiella quasipneumoniae subsp. quasipneumoniae	1667327	PRJNA202000	202000	Proteobacteria	Gammaproteobacteria	5.53913	57.8	-	AYIC01	10	5475	5159	10/30/13	7/24/17	Scaffold	Broad Institute	SAMN02138619	GCA_000492415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/415/GCA_000492415.1_Kleb_pneu_UCI_14_V1	-	UCICRE 14
Mycobacterium heraklionense	512402	PRJNA305922	305922	Terrabacteria group	Actinobacteria	4.40146	67.9	-	MBEL01	252	4139	3876	1/18/17	4/16/17	Contig	JCVI	SAMN04634273	GCA_001953995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/995/GCA_001953995.1_ASM195399v1	-	NS-7503
Bacillus circulans	1397	PRJNA395369	395369	Terrabacteria group	Firmicutes	5.03287	35.5	-	NPBO01	122	4790	4646	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372688	GCA_002271995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/995/GCA_002271995.1_assembly-7520-T_v1	-	7520-T
Mycobacterium sinense	875328	PRJNA305922	305922	Terrabacteria group	Actinobacteria	4.74776	68.5	-	LZKG01	183	4603	4299	6/17/16	4/13/17	Contig	JCVI	SAMN04634248	GCA_001672735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/735/GCA_001672735.1_ASM167273v1	-	E1876
Bacillus marisflavi	189381	PRJNA308248	308248	Terrabacteria group	Firmicutes	4.31265	48.7	-	LQQY01	47	4421	4265	4/13/16	4/12/17	Contig	University of Malaya	SAMN04390146	GCA_001619805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/805/GCA_001619805.1_ASM161980v1	-	M19
Methylobacterium aquaticum	270351	PRJNA278213	278213	Proteobacteria	Alphaproteobacteria	6.35234	70.9	-	LDRN01	384	5852	5516	12/22/15	4/11/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401378	GCA_001477085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/085/GCA_001477085.1_ASM147708v1	26793183	NS230
Leclercia sp. UBA4406	1946739	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.36571	54.9	-	DGQU01	128	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451897	GCA_002390855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/855/GCA_002390855.1_ASM239085v1	28894102	-
Mycobacterium conceptionense	451644	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.4525	66.4	-	LZHU01	98	6211	6033	6/17/16	4/5/17	Contig	JCVI	SAMN04634269	GCA_001667305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/305/GCA_001667305.1_ASM166730v1	-	ACS4694
Paracoccus sanguinis	1545044	PRJNA254739	254739	Proteobacteria	Alphaproteobacteria	3.56488	70.7	-	JRKP01	273	3448	3230	10/6/14	4/9/17	Contig	Wadsworth Center / NYSDOH	SAMN02927207	GCA_000763865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/865/GCA_000763865.1_ASM76386v1	-	39524
Trabulsiella odontotermitis	379893	PRJNA291074	291074	Proteobacteria	Gammaproteobacteria	4.61813	54.8	-	LIFY01	45	4399	4179	9/23/15	4/4/17	Scaffold	IBT-UNAM	SAMN03943322	GCA_001297785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/785/GCA_001297785.1_ASM129778v1	26543120	TbOT1.3
Yersinia pseudotuberculosis	633	PRJEB14046	359654	Proteobacteria	Gammaproteobacteria	4.79409	47.5578	chromosome 1:NZ_LT596221.1/LT596221.1; plasmid 2:NZ_LT596222.1/LT596222.1	-	2	4459	4204	1/2/17	4/6/17	Complete Genome	UNIVERSITY OF MELBOURNE	SAMEA3988158	GCA_900092345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/345/GCA_900092345.1_YP4713	-	-
Lactobacillus agilis	1601	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.18849	41.3	-	LYQO01	113	2218	2020	7/14/17	7/17/17	Scaffold	University of Minnesota	SAMN04498970	GCA_002218605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/605/GCA_002218605.1_ASM221860v1	-	UMNLA6
uncultured Dysgonomonas sp.	206096	PRJEB13528	390592	FCB group	Bacteroidetes/Chlorobi group	4.00396	37.5	-	FLUL01	1	3745	3679	6/15/17	6/15/17	Scaffold	Genoscope CEA	SAMEA3931515	GCA_900079735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/735/GCA_900079735.1_APW_PRJEB13528_v1	-	-
Yersinia pseudotuberculosis str. PA3606	748672	PRJNA239349	239349	Proteobacteria	Gammaproteobacteria	4.8303	47.5517	chromosome:NZ_CP010067.1/CP010067.1; plasmid unnamed1:NZ_CP010069.1/CP010069.1; plasmid unnamed2:NZ_CP010068.1/CP010068.1	-	3	4445	4155	2/9/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03223176	GCA_000834945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/945/GCA_000834945.1_ASM83494v1	25931590	Pa3606
Pantoea septica	472695	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.19715	59.3	-	DDAV01	40	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456964	GCA_002333025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/025/GCA_002333025.1_ASM233302v1	28894102	-
Brachybacterium sp. SW0106-09	1704590	PRJDB4174	293820	Terrabacteria group	Actinobacteria	3.71086	72.2	-	BCAK01	62	3362	3199	9/9/15	4/11/17	Contig	Shandong University	SAMD00039994	GCA_001293905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/905/GCA_001293905.1_ASM129390v1	-	SW0106-09
Idiomarina abyssalis	86102	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.80493	46.8	-	DCSR01	25	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454077	GCA_002325725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/725/GCA_002325725.1_ASM232572v1	28894102	-
Yersinia pseudotuberculosis IP 32953	273123	PRJNA239344	239344	Proteobacteria	Gammaproteobacteria	4.83943	47.5408	chromosome:NZ_CP009712.1/CP009712.1; plasmid pYAC_1:NZ_CP009711.1/CP009711.1; plasmid pYAC_2:NZ_CP009710.1/CP009710.1	-	3	4497	4245	2/9/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03121000	GCA_000834295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/295/GCA_000834295.1_ASM83429v1	25931590	IP32953
Lactobacillus lindneri DSM 20690 = JCM 11027	1122148	PRJEB19573	376356	Terrabacteria group	Firmicutes	1.42637	34.1	-	FUXS01	31	1480	1341	3/4/17	3/11/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02746042	GCA_900167245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/245/GCA_900167245.1_IMG-taxon_2568526012_annotated_assembly	-	DSM 20690
Lactobacillus paracollinoides DSM 15502 = JCM 11969	1423785	PRJDB762	243674	Terrabacteria group	Firmicutes	3.51048	46.8	-	BBAG01	170	3357	2450	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00000423	GCA_001311135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/135/GCA_001311135.1_ASM131113v1	-	JCM 11969
Lactobacillus kefiri DSM 20587 = JCM 5818	1423764	PRJDB803	243714	Terrabacteria group	Firmicutes	2.50198	41.6	-	BBBV01	141	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000469	GCA_001311745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/745/GCA_001311745.1_ASM131174v1	-	JCM 5818
Pseudomonas congelans	200452	PRJNA387592	387592	Proteobacteria	Gammaproteobacteria	5.91411	59.3	-	NQYB01	157	5408	4894	9/20/17	9/22/17	Contig	Max Planck Institute 	SAMN07158948	GCA_002318885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/885/GCA_002318885.1_ASM231888v1	28880925	DM2.1.12.02A
Mycobacterium peregrinum	43304	PRJNA299467	299467	Terrabacteria group	Actinobacteria	7.05015	66.3	-	LQPP01	78	6770	6591	4/20/17	4/22/17	Contig	University of Trento	SAMN04216946	GCA_002102345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/345/GCA_002102345.1_ASM210234v1	-	DSM 43271
Candidatus Cloacimonas sp. 4484_275	1970770	PRJNA362212	362212	FCB group	Candidatus Cloacimonetes	0.972117	37.4	-	NATF01	113	1028	947	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06624597	GCA_002085205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/205/GCA_002085205.1_ASM208520v1	-	-
Methanosaeta sp. ASO1	1917474	PRJNA338276	338276	Euryarchaeota	Methanomicrobia	1.1703	55	-	NOLE01	263	1353	1353	8/16/17	8/16/17	Contig	The Ohio State University	SAMN05908755	GCA_002256715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/715/GCA_002256715.1_ASM225671v1	-	-
Mycobacterium gordonae	1778	PRJNA305922	305922	Terrabacteria group	Actinobacteria	7.76416	66.6	-	MAEM01	574	7218	6466	6/22/16	4/13/17	Contig	JCVI	SAMN05202167	GCA_001675225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/225/GCA_001675225.1_ASM167522v1	-	1245752.6
Duganella sp. Leaf126	1736266	PRJNA297956	297956	Proteobacteria	Betaproteobacteria	5.31501	65.1	-	LMNW01	36	4560	4363	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151646	GCA_001423125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/125/GCA_001423125.1_Leaf126	26633631	Leaf126
Kocuria kristinae	37923	PRJNA278410	278410	Terrabacteria group	Actinobacteria	2.24275	71.8	-	LDRF01	202	2032	1867	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401334	GCA_001476175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/175/GCA_001476175.1_ASM147617v1	26793183	SA11
Bordetella pseudohinzii	1331258	PRJEB17775	374813	Proteobacteria	Betaproteobacteria	4.47326	66.4	-	FPJN01	390	-	-	2/16/17	2/16/17	Contig	Tropical Infectious Diseases Research and Education Centre	SAMEA4546733	GCA_900119415.1	-	-	-	-
Plantibacter sp. MMLR14_011	1898746	PRJNA342146	342146	Terrabacteria group	Actinobacteria	4.08928	69.3	-	MJGW01	104	3797	3702	11/2/16	4/13/17	Scaffold	Massachusetts Institute of Technology	SAMN05736488	GCA_001865025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/025/GCA_001865025.1_ASM186502v1	-	MMLR14_011
Agreia sp. VKM Ac-2052	123316	PRJEB19592	376337	Terrabacteria group	Actinobacteria	3.87621	65.2	-	FUYG01	19	3669	3584	3/4/17	3/10/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06295879	GCA_900167545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/545/GCA_900167545.1_IMG-taxon_2708742401_annotated_assembly	-	VKM Ac-2052
Agromyces sp. NDB4Y10	1775951	PRJNA305084	305084	Terrabacteria group	Actinobacteria	3.33662	72.1	-	LQGY01	69	3228	3090	4/13/16	4/12/17	Contig	Griffith University	SAMN04378109	GCA_001620055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/055/GCA_001620055.1_ASM162005v1	-	NDB4Y10
Rathayibacter sp. VKM Ac-2630	1938617	PRJNA287312	287312	Terrabacteria group	Actinobacteria	3.88215	72	-	MUKN01	136	3780	3216	2/10/17	8/21/17	Contig	G.K.Skryabin IBPM RAS	SAMN06250922	GCA_001995175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/175/GCA_001995175.1_ASM199517v1	28751392	VKM Ac-2630
Aureimonas sp. Leaf427	1736375	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	5.43823	67	-	LMQW01	53	5107	4926	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151765	GCA_001425485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/485/GCA_001425485.1_Leaf427	26633631	Leaf427
Phenylobacterium sp. CCH9-H3	1768774	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	5.42335	69.5	-	LSJI01	303	5318	5039	2/10/16	4/12/17	Contig	Georgia Institute of Technology	SAMN04299459	GCA_001557235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/235/GCA_001557235.1_ASM155723v1	-	CCH9-H3
Phycicoccus sp. Soil802	1736414	PRJNA298127	298127	Terrabacteria group	Actinobacteria	4.2946	70.7	-	LMSS01	9	4015	3901	11/2/15	4/11/17	Contig	ETH Zurich	SAMN04155679	GCA_001429605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/605/GCA_001429605.1_Soil802	26633631	Soil802
Yersinia pseudotuberculosis IP 32953	273123	PRJNA12950	12950	Proteobacteria	Gammaproteobacteria	4.8409	47.5404	chromosome:NC_006155.1/BX936398.1; plasmid pYV:NC_006153.2/BX936399.2; plasmid pYptb32953:NC_006154.1/BX936400.1	-	3	4495	4249	8/27/04	5/19/17	Complete Genome	Lawrence Livermore National Laboratory	SAMEA3138251	GCA_000047365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/047/365/GCA_000047365.1_ASM4736v1	15358858	IP 32953
Curvibacter sp. RIFCSPHIGHO2_12_FULL_63_18	1797748	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	3.84639	62.3	-	MGPD01	43	3639	3502	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315553	GCA_001795465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/795/465/GCA_001795465.1_ASM179546v1	27774985	-
Ferrovum sp. 37-45-19	1970377	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	1.99967	44.4	-	NCBS01	70	2036	1940	8/16/17	8/16/17	Contig	None	SAMN06622418	GCA_002279305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/305/GCA_002279305.1_ASM227930v1	-	-
Lactobacillus parabuchneri	152331	PRJNA320351	320351	Terrabacteria group	Firmicutes	2.5616	43.5	-	LXIA01	24	2428	2319	6/28/16	4/5/17	Contig	Instituto de Productos Lacteos de Asturias (IPLA-CSIC)	SAMN04932665	GCA_001677035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/035/GCA_001677035.1_Lpb2E51	-	IPLA 11122
Lactobacillus taiwanensis	508451	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.22214	34.2	-	NGNY01	113	2266	2019	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848432	GCA_002253075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/075/GCA_002253075.1_ASM225307v1	-	609h
Lactobacillus aviarius	1606	PRJNA316009	316009	Terrabacteria group	Firmicutes	1.61227	40.3	-	LWUD01	53	1551	1449	6/2/16	4/5/17	Contig	University of Minnesota	SAMN04573031	GCA_001654615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/654/615/GCA_001654615.1_ASM165461v1	-	UMNLAv11
Bacillus paralicheniformis	1648923	PRJNA243587	243587	Terrabacteria group	Firmicutes	4.38921	45.8	-	JMPZ01	1	4425	4172	9/2/14	4/2/17	Scaffold	Los Alamos National Laboratory	SAMN02739298	GCA_000746885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/885/GCA_000746885.1_BLA	25301645	ATCC 12759
Candidatus Kryptobacter tengchongensis	1643429	PRJNA279032	279032	FCB group	Candidatus Kryptonia	1.60224	36.6	-	LDXV01	175	-	-	11/12/15	11/12/15	Contig	DOE Joint Genome Institute	SAMN03436304	GCA_001442845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/845/GCA_001442845.1_ASM144284v1	-	-
Nitrospira sp. SCN 59-13	1660252	PRJNA279279	279279	Nitrospirae	Nitrospira	1.82245	59.1	-	MEEP01	212	1750	1559	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652464	GCA_001724505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/505/GCA_001724505.1_ASM172450v1	26031303	-
Enterobacter kobei	208224	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.0159	54.6	-	JZYH01	81	4958	4730	3/19/15	4/3/17	Contig	JCVI	SAMN03283656	GCA_000958445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/445/GCA_000958445.1_ASM95844v1	-	42202
Synechocystis sp. PCC 6714	1147	PRJNA176824	176824	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.73889	47.5391	chromosome:NZ_CP007542.1/CP007542.1; plasmid pSYLA:NZ_CP007543.1/CP007543.1; plasmid pSYLB:NZ_CP007544.1/CP007544.1; plasmid pSYLC:NZ_CP007545.1/CP007545.1	-	4	3504	3321	7/9/14	4/9/17	Complete Genome	University of Freiburg	SAMN02471775	GCA_000478825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/825/GCA_000478825.2_ASM47882v2	"2,440,887,625,081,260"	PCC 6714
Enterobacter xiangfangensis	1296536	PRJNA278422	278422	Proteobacteria	Gammaproteobacteria	4.70538	55.5	-	LDQL01	187	4538	4311	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401393	GCA_001475835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/835/GCA_001475835.1_ASM147583v1	26793183	NS24
Halothiobacillus sp. 20-54-6	1970384	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	1.70004	54	-	NCAJ01	568	1876	1802	8/16/17	8/16/17	Scaffold	None	SAMN06622454	GCA_002255445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/445/GCA_002255445.1_ASM225544v1	-	-
Halobacterium hubeiense	1407499	PRJEB8631	319516	Euryarchaeota	Halobacteria	3.23517	66.4	-	CEMP01	10	3377	3183	4/24/16	7/28/17	Scaffold	UH	SAMEA3268809	GCA_900003565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/003/565/GCA_900003565.1_ASM90000356v1	-	JI20-6
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.93969	66.5	-	LOSY01	105	6423	6092	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449132	GCA_001522355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/355/GCA_001522355.1_ASM152235v1	-	RF6-non_BP1
Bacillus halotolerans	260554	PRJNA306582	306582	Terrabacteria group	Firmicutes	4.20528	43.5	-	LPVE01	27	4275	4046	1/19/16	9/5/17	Scaffold	NCAUR-ARS-USDA	SAMN04358092	GCA_001517135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/135/GCA_001517135.1_ASM151713v1	27030978	NRRL B-41618
Elizabethkingia genomosp. 3	1756149	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	4.37908	35.8	-	MAHW01	20	4073	3965	3/8/17	3/10/17	Contig	CDC	SAMN05277862	GCA_002023775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/775/GCA_002023775.1_ASM202377v1	-	G0153
Burkholderia diffusa	488732	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.7937	66.5	-	LOXI01	71	6316	5996	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449263	GCA_001524385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/385/GCA_001524385.1_ASM152438v1	-	MSMB0010
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.91856	67.5	-	LPAM01	110	7122	6752	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449349	GCA_001526825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/825/GCA_001526825.1_ASM152682v1	-	MSMB1602WGS
Burkholderia pseudomultivorans	1207504	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.9091	67.4	-	LOUW01	123	7244	6939	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449186	GCA_001525825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/825/GCA_001525825.1_ASM152582v1	-	SUB-INT24-BP10
Burkholderia anthina	179879	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.4073	67.1	-	LOZO01	80	6861	6501	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449324	GCA_001527555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/555/GCA_001527555.1_ASM152755v1	-	MSMB1497
Candidatus Kryptonium thompsoni	1633631	PRJEB11712	301861	FCB group	Candidatus Kryptonia	2.24423	37.3	-	CZVN01	159	2178	1956	11/11/15	4/11/17	Scaffold	DOE - Joint Genome Institute	SAMN03436067	GCA_001536005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/005/GCA_001536005.1_JGI_assembly	-	JGI-13
Porphyrobacter donghaensis	267135	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	3.99664	66.8	-	LSJB01	347	3949	3681	2/10/16	4/4/17	Contig	Georgia Institute of Technology	SAMN04299452	GCA_001556555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/555/GCA_001556555.1_ASM155655v1	-	CCH3-A4
Photobacterium aquimaris	512643	PRJEB19610	381185	Proteobacteria	Gammaproteobacteria	4.3061	39.5	-	FYAH01	53	3907	3698	6/3/17	6/12/17	Scaffold	UVEG	SAMEA104106936	GCA_900185565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/565/GCA_900185565.1_P.aquimaris_CECT9191_Spades_Prokka_EMBL	-	type strain: CECT 9192
Paenibacillus amylolyticus	1451	PRJNA343020	343020	Terrabacteria group	Firmicutes	6.97875	45.8	-	MRTO01	55	6081	5940	1/18/17	4/17/17	Contig	Cornell University	SAMN05929619	GCA_001956175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/175/GCA_001956175.1_ASM195617v1	-	FSL J3-0122
Enterobacter cloacae CHS 79	1439326	PRJNA234248	234248	Proteobacteria	Gammaproteobacteria	5.18931	55.6	-	JMUS01	13	5074	4771	5/19/14	4/20/17	Scaffold	Broad Institute	SAMN02581381	GCA_000692295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/295/GCA_000692295.1_Ente_cloa_CHS_79_V1	-	CHS 79
Enterobacter cloacae UCICRE 3	1329852	PRJNA201986	201986	Proteobacteria	Gammaproteobacteria	4.97359	55.1	-	AYIM01	5	4902	4622	10/30/13	4/2/17	Scaffold	Broad Institute	SAMN02138608	GCA_000492615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/615/GCA_000492615.1_Ente_cloa_UCI_3_V1	-	UCICRE 3
Gluconobacter japonicus	376620	PRJNA313261	313261	Proteobacteria	Alphaproteobacteria	3.49536	56.3	-	LVHE01	50	3313	3132	5/12/16	4/12/17	Contig	Universitat Rovira i Virgili	SAMN04528818	GCA_001642615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/615/GCA_001642615.1_ASM164261v1	-	CECT 8443
Polynucleobacter sp. MWH-Feld-100	1743163	PRJNA295639	295639	Proteobacteria	Betaproteobacteria	1.97581	45.2	-	NGUP01	9	2048	1959	6/23/17	6/28/17	Contig	University of Innsbruck	SAMN07121064	GCA_002206625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/625/GCA_002206625.1_ASM220662v1	-	MWH-Feld-100
Pseudomonas koreensis	198620	PRJNA353628	353628	Proteobacteria	Gammaproteobacteria	6.62203	59.2	-	MPLD01	16	5962	5791	2/16/17	4/17/17	Contig	Yale University	SAMN06018396	GCA_002003425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/003/425/GCA_002003425.1_ASM200342v1	-	CI12
Nitrosopelagicus sp. REDSEA-S25_B3	1811584	PRJNA289734	289734	TACK group	Thaumarchaeota	0.892063	34.1	-	LUOZ01	116	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534601	GCA_001627075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/075/GCA_001627075.1_ASM162707v1	27377622	-
Hydrotalea flava	714549	PRJEB14091	329620	FCB group	Bacteroidetes/Chlorobi group	2.08245	36.8	-	FLNT01	131	1931	1777	7/19/16	4/5/17	Contig	FIOCRUZ-MG	SAMEA4028672	GCA_900089575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/575/GCA_900089575.1_P17	-	-
bacterium 2013Ark19i	1561004	PRJEB7439	304961	unclassified Bacteria	unclassified Bacteria (miscellaneous)	2.45712	38.4	-	FKIL01	203	1615	1466	4/7/16	8/1/17	Scaffold	Functional Genomics Genter Zurich	SAMEA2826834	GCA_900078785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/785/GCA_900078785.1_2013Ark19	-	2013Ark19
Oleiphilus sp. HI0117	1822261	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	4.62057	44.2	-	LWGA01	1521	4425	3741	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580800	GCA_001635235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/235/GCA_001635235.1_ASM163523v1	-	HI0117
Thalassolituus sp. UBA675	1947667	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.35156	51.7	-	DBNJ01	33	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455246	GCA_002297765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/765/GCA_002297765.1_ASM229776v1	28894102	-
Achromobacter ruhlandii	72557	PRJNA295291	295291	Proteobacteria	Betaproteobacteria	6.49881	67.6	-	LVKN01	89	5975	5779	5/4/16	4/12/17	Contig	Universidade do Estado do Rio de Janeiro	SAMN04045711	GCA_001637115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/115/GCA_001637115.1_ASM163711v1	-	7022
Polynucleobacter asymbioticus	576611	PRJNA266917	266917	Proteobacteria	Betaproteobacteria	2.27081	44.8	-	LVLG01	9	2276	2213	11/7/16	4/5/17	Contig	University of Innsbruck	SAMN04575158	GCA_001870285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/285/GCA_001870285.1_ASM187028v1	-	MWH-Tro8-2-9
Eikenella sp. NML02-A-017	1795827	PRJNA310649	310649	Proteobacteria	Betaproteobacteria	2.2359	58.5	-	LXSL01	34	2234	2086	5/19/16	4/12/17	Contig	Public Health Agency of Canada	SAMN04931636	GCA_001648355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/355/GCA_001648355.1_ASM164835v1	-	NML02-A-017
Vibrio cholerae	666	PRJNA301765	301765	Proteobacteria	Gammaproteobacteria	4.06251	47.5311	chromosome 1:NZ_CP013307.1/CP013307.1; chromosome 2:NZ_CP013308.1/CP013308.1	-	2	3947	3718	11/30/16	3/28/17	Complete Genome	Nankai University	SAMN04256436	GCA_001887475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/475/GCA_001887475.1_ASM188747v1	27849586	E506
Mycobacterium malmoense	1780	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.572	69.1	-	MBEE01	295	5392	5028	7/15/16	4/13/17	Contig	JCVI	SAMN04634215	GCA_001686745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/745/GCA_001686745.1_ASM168674v1	-	E3012
Lachnoclostridium sp. An169	1965569	PRJNA377666	377666	Terrabacteria group	Firmicutes	4.85326	49.4	-	NFKT01	91	4438	4245	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473635	GCA_002160525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/525/GCA_002160525.1_ASM216052v1	-	An169
Ruminiclostridium sp. UBA3934	1947402	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.35383	46.5	-	DGEE01	167	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454780	GCA_002385815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/815/GCA_002385815.1_ASM238581v1	28894102	-
Gilliamella sp. NO13	1970458	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.53311	34.7	-	NASG01	60	2294	2212	5/16/17	5/24/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603533	GCA_002141975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/975/GCA_002141975.1_ASM214197v1	-	NO13
Bacillus wiedmannii	1890302	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.39993	35.2	-	LXFO01	66	5792	5493	5/17/16	4/5/17	Contig	Cornell University	SAMN04909726	GCA_001645445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/445/GCA_001645445.1_ASM164544v1	-	FSL M7-0044
Flavonifractor sp. An306	1965629	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.90289	59.1	-	NFIQ01	280	3960	3632	5/30/17	6/15/17	Contig	Veterinary Research Institute	SAMN06473716	GCA_002159455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/455/GCA_002159455.1_ASM215945v1	-	An306
Candidatus Thiodiazotropha endoloripes	1818881	PRJNA314435	314435	Proteobacteria	Gammaproteobacteria	4.88142	51.7	-	LVKA01	27	4380	4271	8/23/16	4/13/17	Scaffold	University of Vienna	SAMN04574145	GCA_001709035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/035/GCA_001709035.1_ASM170903v1	27775707	-
Eisenbergiella tayi	1432052	PRJNA335591	335591	Terrabacteria group	Firmicutes	7.49869	46.8	-	MEHD01	57	6581	6379	9/9/16	4/5/17	Contig	Public Health Agency of Canada	SAMN05449648	GCA_001722635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/635/GCA_001722635.1_ASM172263v1	-	NML120146
Candidatus Marithrix sp. Canyon 246	1827136	PRJNA322859	322859	Proteobacteria	Gammaproteobacteria	2.54411	34.1	-	MCBZ01	213	2645	2438	9/13/16	4/13/17	Contig	Max Planck Institute for Marine Microbiology	SAMN05176327	GCA_001723735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/735/GCA_001723735.1_ASM172373v1	27536274	-
Pelagibacterium sp. SCN 68-10	1660127	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	0.330916	68	-	MEGF01	43	343	292	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652509	GCA_001725395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/395/GCA_001725395.1_ASM172539v1	26031303	-
Thiobacillus sp. SCN 65-179	1660144	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	3.05237	64.8	-	MEGN01	30	3041	2935	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652517	GCA_001725525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/525/GCA_001725525.1_ASM172552v1	26031303	-
Streptomyces nanshensis	518642	PRJNA242488	242488	Terrabacteria group	Actinobacteria	7.42961	70.3	-	LJGX01	2310	7365	6737	10/4/16	10/4/16	Scaffold	"Beijing Institute of Genomics, Chinese Academy of Sciences"	SAMN04026266	GCA_001751275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/275/GCA_001751275.1_ASM175127v1	27446038	SCSIO 01066
Streptomyces agglomeratus	285458	PRJNA340066	340066	Terrabacteria group	Actinobacteria	7.08799	70.8	-	MEHL01	3	6397	6005	9/26/16	3/13/17	Contig	Chinese Academy of Sciences	SAMN05631093	GCA_001746485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/485/GCA_001746485.1_ASM174648v1	-	5/1/08
Turicella sp. HMSC059E07	1739471	PRJNA300121	300121	Terrabacteria group	Actinobacteria	2.73107	60.9	-	LTUY01	78	2539	2403	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480401	GCA_001814395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/395/GCA_001814395.1_ASM181439v1	-	HMSC059E07
Mycobacterium franklinii	948102	PRJNA354248	354248	Terrabacteria group	Actinobacteria	5.44209	64.1	-	MVHQ01	61	5431	5235	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064239	GCA_002086225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/225/GCA_002086225.1_ASM208622v1	-	DSM 45524
Halanaerobium congolense	54121	PRJEB16102	348608	Terrabacteria group	Firmicutes	2.67835	32.9	-	FNGB01	80	2580	2399	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04515655	GCA_900102975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/975/GCA_900102975.1_IMG-taxon_2642422587_annotated_assembly	-	WG8
Bradyrhizobium canariense	255045	PRJNA355580	355580	Proteobacteria	Alphaproteobacteria	8.29449	62.9	-	NAEZ01	182	7891	7344	4/24/17	8/7/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN06077199	GCA_002108745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/745/GCA_002108745.1_ASM210874v1	28729275	UBMA052
Bradyrhizobium erythrophlei	1437360	PRJEB18194	355469	Proteobacteria	Alphaproteobacteria	9.09214	61.4	chromosome I:NZ_LT670817.1/LT670817.1	-	1	8638	8280	12/2/16	3/18/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05443248	GCA_900129425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/425/GCA_900129425.1_IMG-taxon_2695421015_annotated_assembly	-	GAS138
Collimonas sp. UBA1456	1946382	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	1.65824	52.5	-	DCSW01	131	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451564	GCA_002325825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/825/GCA_002325825.1_ASM232582v1	28894102	-
Azotobacter beijerinckii	170623	PRJEB17433	351638	Proteobacteria	Gammaproteobacteria	4.92302	65.7	-	FOSX01	249	4785	4259	10/30/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04244574	GCA_900114395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/395/GCA_900114395.1_IMG-taxon_2597490352_annotated_assembly	-	DSM 381
Terribacillus saccharophilus	361277	PRJNA395369	395369	Terrabacteria group	Firmicutes	3.62328	42.9	-	NPBH01	102	3668	3578	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372678	GCA_002272165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/165/GCA_002272165.1_assembly-7509_v1	-	7509
Megamonas sp. UBA1799	1946842	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.44191	49.4	-	DCFR01	88	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455217	GCA_002319815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/815/GCA_002319815.1_ASM231981v1	28894102	-
Fibrobacter sp. UWH3	1964353	PRJNA376435	376435	FCB group	Fibrobacteres	3.86894	48.8	-	MWQF01	62	3237	3083	6/28/17	6/30/17	Contig	University of Wisconsin - Madison	SAMN06392822	GCA_002210355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/210/355/GCA_002210355.1_ASM221035v1	-	UWH3
Ktedonobacter sp. 13_1_20CM_4_53_7	1805226	PRJNA297196	297196	Terrabacteria group	Chloroflexi	1.37956	52.7	-	MNIQ01	440	1326	1040	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327761	GCA_001919845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/845/GCA_001919845.1_ASM191984v1	27843720	-
Bartonella apis	1686310	PRJNA312666	312666	Proteobacteria	Alphaproteobacteria	2.52526	45.5	-	LXYT01	7	2251	2176	1/13/17	4/16/17	Contig	University of Lausanne	SAMN04505059	GCA_001952065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/065/GCA_001952065.1_ASM195206v1	-	PEB0149
Ensifer aridi	1708715	PRJNA312299	312299	Proteobacteria	Alphaproteobacteria	6.42502	61.8	-	LUFW01	193	6179	5789	4/14/17	4/21/17	Scaffold	IRD	SAMN04492864	GCA_002093495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/495/GCA_002093495.1_ASM209349v1	28088165	LEM457
Rodentibacter ratti	1906745	PRJNA343597	343597	Proteobacteria	Gammaproteobacteria	2.40459	40.3	-	MLAH01	144	2438	2281	2/15/17	4/17/17	Contig	University of Copenhagen	SAMN05860626	GCA_002000525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/525/GCA_002000525.1_ASM200052v1	-	Ppn157
Archaeoglobus sp. JdFR-30	1934987	PRJNA269163	269163	Euryarchaeota	Archaeoglobi	1.10041	39.8	-	MTMR01	55	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226347	GCA_002010165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/165/GCA_002010165.1_ASM201016v1	28350381	-
Vibrio cholerae 2740-80	412614	PRJNA256339	256339	Proteobacteria	Gammaproteobacteria	4.08896	47.5305	chromosome 1:NZ_CP016324.1/CP016324.1; chromosome 2:NZ_CP016325.1/CP016325.1	-	2	3961	3723	7/11/16	3/28/17	Complete Genome	Indiana University	SAMN02943003	GCA_001683415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/415/GCA_001683415.1_ASM168341v1	-	2740-80
Elizabethkingia endophytica	1606016	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	3.98662	35.5	-	MAHJ01	16	3627	3526	3/8/17	3/10/17	Contig	CDC	SAMN05256551	GCA_002023565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/565/GCA_002023565.1_ASM202356v1	-	CSID_3000516978
Pseudoflavonifractor sp. An85	1965661	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.98447	56.2	-	NFHE01	146	2923	2734	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473765	GCA_002161235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/235/GCA_002161235.1_ASM216123v1	-	An85
Demequina sp. NBRC 110053	1570342	PRJDB3263	276645	Terrabacteria group	Actinobacteria	2.50027	70.5	-	BBRJ01	3	2347	2271	4/1/17	4/17/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00022843	GCA_002090095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/095/GCA_002090095.1_ASM209009v1	-	NBRC 110053
Xanthomonas axonopodis pv. manihotis str. IBSBF 2666	1185678	PRJNA163751	163751	Proteobacteria	Gammaproteobacteria	4.84228	65.1	-	AKDJ01	311	4403	3869	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090314	GCA_000265625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/625/GCA_000265625.1_IBSBF2666	22699502	IBSBF 2666
Listeria sp. ILCC801	1649188	PRJEB9225	390501	Terrabacteria group	Firmicutes	2.69184	40.4	-	FYBT01	18	2694	2593	6/15/17	7/5/17	Contig	JUSTUS LIEBIG UNIVERSITY	SAMEA104121262	GCA_900186165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/165/GCA_900186165.1_ILCC793.fasta	-	-
Chloracidobacterium sp. UBA4013	1946318	PRJNA348753	348753	Acidobacteria	Blastocatellia	4.90458	53.1	-	DGBD01	372	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455270	GCA_002384175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/175/GCA_002384175.1_ASM238417v1	28894102	-
Azorhizobium sp. 39-67-5	1970322	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	1.81174	66.7	-	NCIW01	1063	2261	2125	8/16/17	8/16/17	Scaffold	None	SAMN06622232	GCA_002282175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/175/GCA_002282175.1_ASM228217v1	-	-
Catabacter sp. UBA779	1946303	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.00121	30.2	-	DBJJ01	93	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456207	GCA_002296745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/745/GCA_002296745.1_ASM229674v1	28894102	-
Candidatus Microthrix sp. UBA825	1946219	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.8076	43.1	-	DBHP01	123	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450819	GCA_002295705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/705/GCA_002295705.1_ASM229570v1	28894102	-
Leptolinea sp. UBA1437	1946750	PRJNA348753	348753	Terrabacteria group	Chloroflexi	2.00374	43.1	-	DCTP01	151	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451860	GCA_002329625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/625/GCA_002329625.1_ASM232962v1	28894102	-
Empedobacter sp. UBA1806	1946430	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.89082	31.5	-	DCFK01	149	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453204	GCA_002315095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/095/GCA_002315095.1_ASM231509v1	28894102	-
Mageeibacillus sp. UBA1255	1946782	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.54909	50.6	-	DBVV01	161	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457806	GCA_002308795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/795/GCA_002308795.1_ASM230879v1	28894102	-
Alphaproteobacteria bacterium	1913988	PRJNA391950	391950	Proteobacteria	Alphaproteobacteria	3.05955	44.9	-	NVTV01	34	3010	2934	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568920	GCA_002401695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/695/GCA_002401695.1_ASM240169v1	-	-
Rhizobiales bacterium	1909294	PRJNA391950	391950	Proteobacteria	Alphaproteobacteria	2.81807	49.4	-	NVSG01	10	2718	2654	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568961	GCA_002401155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/155/GCA_002401155.1_ASM240115v1	-	-
Flavobacteriaceae bacterium	1871037	PRJNA391950	391950	FCB group	Bacteroidetes/Chlorobi group	3.15357	34	-	NVSY01	60	2604	2490	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568943	GCA_002401385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/385/GCA_002401385.1_ASM240138v1	-	-
Gammaproteobacteria bacterium	1913989	PRJNA391950	391950	Proteobacteria	Gammaproteobacteria	1.53887	42.3	-	NVSH01	113	1524	1394	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568960	GCA_002401185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/185/GCA_002401185.1_ASM240118v1	-	-
Gammaproteobacteria bacterium	1913989	PRJNA391950	391950	Proteobacteria	Gammaproteobacteria	3.22974	36.7	-	NVTM01	70	2888	2635	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568929	GCA_002401605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/605/GCA_002401605.1_ASM240160v1	-	-
Rhizobiales bacterium	1909294	PRJNA391950	391950	Proteobacteria	Alphaproteobacteria	3.08365	44	-	NVUH01	50	3035	2973	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568908	GCA_002401855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/855/GCA_002401855.1_ASM240185v1	-	-
Alphaproteobacteria bacterium	1913988	PRJNA391950	391950	Proteobacteria	Alphaproteobacteria	2.09303	43.9	-	NVUR01	54	2008	1953	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568898	GCA_002401965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/965/GCA_002401965.1_ASM240196v1	-	-
Mageeibacillus sp. UBA1212	1946780	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.79774	54.8	-	DBXM01	54	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457300	GCA_002309655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/655/GCA_002309655.1_ASM230965v1	28894102	-
Empedobacter sp. UBA1574	1946429	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.01909	31.5	-	DCOI01	44	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455825	GCA_002322895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/895/GCA_002322895.1_ASM232289v1	28894102	-
Faecalitalea sp. UBA4349	1946519	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.76858	38.2	-	DGSZ01	111	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454399	GCA_002393645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/645/GCA_002393645.1_ASM239364v1	28894102	-
Candidatus Microthrix sp. UBA857	1946221	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.84916	43.9	-	DBGJ01	180	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455547	GCA_002295815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/815/GCA_002295815.1_ASM229581v1	28894102	-
Catabacter sp. UBA767	1946299	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.39432	46	-	DBJV01	121	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452386	GCA_002297185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/185/GCA_002297185.1_ASM229718v1	28894102	-
Listeria sp. ILCC801	1649188	PRJEB9225	390501	Terrabacteria group	Firmicutes	2.59883	40.6	-	FYBV01	22	2579	2482	6/15/17	7/5/17	Contig	JUSTUS LIEBIG UNIVERSITY	SAMEA104121263	GCA_900186175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/175/GCA_900186175.1_ILCC796.fasta	-	-
Xanthomonas axonopodis pv. manihotis str. IBSBF 2665	1185677	PRJNA163749	163749	Proteobacteria	Gammaproteobacteria	4.8368	65.1	-	AKDI01	434	4456	3908	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090313	GCA_000265645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/645/GCA_000265645.1_IBSBF2665	22699502	IBSBF 2665
Demequina sp. NBRC 110055	1570344	PRJDB3263	276645	Terrabacteria group	Actinobacteria	2.82166	68.9	-	BBRL01	14	2629	2554	4/1/17	4/17/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00022845	GCA_002090135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/135/GCA_002090135.1_ASM209013v1	-	NBRC 110055
Pseudoflavonifractor sp. An44	1965635	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.7523	57.4	-	NFIH01	52	2499	2354	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473726	GCA_002161675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/675/GCA_002161675.1_ASM216167v1	-	An44
Elizabethkingia endophytica	1606016	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	3.96427	35.6	-	MAHL01	18	3610	3524	3/8/17	3/10/17	Contig	CDC	SAMN05256625	GCA_002023625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/625/GCA_002023625.1_ASM202362v1	-	CSID_3000517066
Campylobacter pinnipediorum subsp. pinnipediorum	1660067	PRJNA338064	338064	Proteobacteria	delta/epsilon subdivisions	1.68298	30.4	-	MDCV01	45	1695	1607	9/18/16	5/30/17	Contig	"USDA, ARS, WRRC"	SAMN05514160	GCA_001730535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/535/GCA_001730535.1_ASM173053v1	-	RM18906
Archaeoglobus sp. JdFR-32	1934989	PRJNA269163	269163	Euryarchaeota	Archaeoglobi	1.96656	42.2	-	MTMT01	120	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226349	GCA_002010195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/195/GCA_002010195.1_ASM201019v1	28350381	-
Ensifer aridi	1708715	PRJNA312299	312299	Proteobacteria	Alphaproteobacteria	6.84828	61.6	-	LUFX01	161	6571	6096	4/14/17	4/21/17	Scaffold	IRD	SAMN04493264	GCA_002093525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/525/GCA_002093525.1_ASM209352v1	28088165	JNVU TP6
Bartonella apis	1686310	PRJNA312665	312665	Proteobacteria	Alphaproteobacteria	2.60312	45.5	-	LXYU01	16	2301	2209	1/13/17	4/16/17	Contig	University of Lausanne	SAMN04505058	GCA_001952075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/075/GCA_001952075.1_ASM195207v1	-	PEB0122
Sphaerochaeta sp. UBA4273	1947472	PRJNA348753	348753	Spirochaetes	Spirochaetia	2.78122	56.5	-	DGVX01	53	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452397	GCA_002396025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/025/GCA_002396025.1_ASM239602v1	28894102	-
Ktedonobacter sp. 13_1_20CM_4_53_11	1805225	PRJNA297196	297196	Terrabacteria group	Chloroflexi	2.577	53.4	-	MNIY01	212	2259	2034	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327789	GCA_001919995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/995/GCA_001919995.1_ASM191999v1	27843720	-
Fibrobacter sp. UWH1	1964354	PRJNA376435	376435	FCB group	Fibrobacteres	3.83082	48.9	-	MWQG01	96	3238	3068	6/28/17	6/30/17	Contig	University of Wisconsin - Madison	SAMN06392821	GCA_002210365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/210/365/GCA_002210365.1_ASM221036v1	-	UWH1
Aminobacterium sp. EBM-42	1918503	PRJNA315143	315143	Synergistetes	Synergistia	1.93066	45.3	-	MPPC01	30	-	-	12/9/16	12/9/16	Contig	UC Berkeley	SAMN06019043	GCA_001896635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/635/GCA_001896635.1_ASM189663v1	-	-
Terribacillus saccharophilus	361277	PRJNA395369	395369	Terrabacteria group	Firmicutes	3.62453	42.9	-	NPBM01	112	3687	3603	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372684	GCA_002272675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/675/GCA_002272675.1_assembly-7520-1_v1	-	7520-1
Bradyrhizobium canariense	255045	PRJNA355572	355572	Proteobacteria	Alphaproteobacteria	8.26702	63	-	NAFB01	196	7872	7295	4/24/17	8/7/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN06077193	GCA_002108755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/755/GCA_002108755.1_ASM210875v1	28729275	UBMA061
Halanaerobium congolense	54121	PRJEB16197	348923	Terrabacteria group	Firmicutes	2.67462	32.9	-	FNHK01	85	2587	2398	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488599	GCA_900103745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/745/GCA_900103745.1_IMG-taxon_2642422542_annotated_assembly	-	WG9
Turicella sp. HMSC034H07	1739512	PRJNA300162	300162	Terrabacteria group	Actinobacteria	2.74723	61.2	-	LTTL01	76	2585	2413	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480429	GCA_001815175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/175/GCA_001815175.1_ASM181517v1	-	HMSC034H07
Thiobacillus sp. SCN 64-317	1660143	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	2.6289	63.7	-	MEGO01	111	2675	2476	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652518	GCA_001725535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/535/GCA_001725535.1_ASM172553v1	26031303	-
Pelagibacterium sp. SCN 63-17	1660126	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	3.95584	62.8	-	MEGG01	79	3836	3671	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652510	GCA_001725405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/405/GCA_001725405.1_ASM172540v1	26031303	-
Candidatus Marithrix sp. Canyon 246	1827136	PRJNA322859	322859	Proteobacteria	Gammaproteobacteria	2.39783	34.1	-	MCCA01	252	2484	2304	9/13/16	4/13/17	Contig	Max Planck Institute for Marine Microbiology	SAMN05176426	GCA_001723755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/755/GCA_001723755.1_ASM172375v1	27536274	-
Eisenbergiella tayi	1432052	PRJNA335591	335591	Terrabacteria group	Firmicutes	7.49847	46.8	-	MEHE01	61	6582	6373	9/9/16	4/5/17	Contig	Public Health Agency of Canada	SAMN05449649	GCA_001722655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/655/GCA_001722655.1_ASM172265v1	-	NML120147
Flavonifractor sp. An135	1965558	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.88995	61.5	-	NFLG01	87	3827	3640	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473608	GCA_002160795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/795/GCA_002160795.1_ASM216079v1	-	An135
Bacillus wiedmannii	1890302	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.36488	35.2	-	LXFP01	58	5748	5455	5/17/16	4/5/17	Contig	Cornell University	SAMN04909727	GCA_001645455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/455/GCA_001645455.1_ASM164545v1	-	FSL M7-0938
Gilliamella sp. NO16	1970456	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.52624	34.7	-	NASE01	57	2288	2204	5/16/17	5/24/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603535	GCA_002141985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/985/GCA_002141985.1_ASM214198v1	-	NO16
Ruminiclostridium sp. UBA3922	1947401	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.0905	51.3	-	DGEQ01	157	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457314	GCA_002386045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/045/GCA_002386045.1_ASM238604v1	28894102	-
Lachnoclostridium sp. An14	1965562	PRJNA377666	377666	Terrabacteria group	Firmicutes	4.28815	54.5	-	NFLE01	93	4038	3876	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473612	GCA_002160755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/755/GCA_002160755.1_ASM216075v1	-	An14
Mycobacterium malmoense	1780	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.68609	69	-	MBEC01	298	5486	5121	7/15/16	4/13/17	Contig	JCVI	SAMN04634213	GCA_001686825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/825/GCA_001686825.1_ASM168682v1	-	E896
Lactobacillus backii	375175	PRJNA288600	288600	Terrabacteria group	Firmicutes	2.63947	40.6	-	LGIZ01	115	2574	2340	12/28/16	4/16/17	Contig	University of Saskatchewan	SAMN03813857	GCA_001923055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/923/055/GCA_001923055.1_ASM192305v1	-	L101
Eikenella sp. NML03-A-027	1795828	PRJNA310649	310649	Proteobacteria	Betaproteobacteria	2.00833	55.7	-	LXSM01	17	2048	1887	5/19/16	4/12/17	Contig	Public Health Agency of Canada	SAMN04931637	GCA_001648395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/395/GCA_001648395.1_ASM164839v1	-	NML03-A-027
Polynucleobacter asymbioticus	576611	PRJNA266917	266917	Proteobacteria	Betaproteobacteria	2.16139	44.8	-	LVJO01	26	2169	2115	11/7/16	4/5/17	Contig	University of Innsbruck	SAMN03175434	GCA_001870305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/305/GCA_001870305.1_ASM187030v1	-	P1-4-10KL
Thalassolituus sp. UBA674	1947666	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.48849	54.9	-	DBNK01	39	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455247	GCA_002298335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/335/GCA_002298335.1_ASM229833v1	28894102	-
Oleiphilus sp. HI0123	1822265	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	4.46813	44.3	-	LWGE01	1909	4281	3515	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580804	GCA_001635315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/315/GCA_001635315.1_ASM163531v1	-	HI0123
bacterium 2013Ark19i	1561004	PRJEB7439	304961	unclassified Bacteria	unclassified Bacteria (miscellaneous)	2.60301	38.3	-	FKIM01	703	1732	1501	4/7/16	8/1/17	Scaffold	Functional Genomics Genter Zurich	SAMEA3903146	GCA_900078795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/795/GCA_900078795.1_2013Arg12B	-	-
Hydrotalea flava	714549	PRJNA302607	302607	FCB group	Bacteroidetes/Chlorobi group	3.4138	37.2	-	LUHG01	116	-	-	4/19/16	6/21/16	Contig	Rene Rachou Research Center / Oswaldo Cruz Foundation	SAMN04528878	GCA_001623405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/405/GCA_001623405.1_ASM162340v1	27284140	CCUG 51397
Nitrosopelagicus sp. REDSEA-S19_B12N3	1811583	PRJNA289734	289734	TACK group	Thaumarchaeota	1.50737	36.3	-	LUOY01	307	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534600	GCA_001627105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/105/GCA_001627105.1_ASM162710v1	27377622	-
Pseudomonas koreensis	198620	PRJNA328580	328580	Proteobacteria	Gammaproteobacteria	6.43625	59.8	-	NIGO01	37	5958	5742	6/8/17	6/10/17	Scaffold	NBAIM	SAMN06445250	GCA_002177125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/125/GCA_002177125.1_ASM217712v1	-	P2
Polynucleobacter sp. MWH-K35W1	1743164	PRJNA295639	295639	Proteobacteria	Betaproteobacteria	2.13508	46	-	NGUO01	37	2195	2072	6/23/17	6/28/17	Contig	University of Innsbruck	SAMN07116277	GCA_002206635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/635/GCA_002206635.1_ASM220663v1	-	MWH-K35W1
Gluconobacter japonicus	376620	PRJNA288385	288385	Proteobacteria	Alphaproteobacteria	3.88996	55.7	-	LHZI01	1753	4572	4403	3/7/16	10/12/16	Scaffold	Ghent University	SAMN03799279	GCA_001580745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/745/GCA_001580745.1_ASM158074v1	-	NBRC103476
Enterobacter cloacae UCI 50	1400155	PRJNA219302	219302	Proteobacteria	Gammaproteobacteria	4.85922	55.1	-	JCKK01	8	4745	4459	2/3/14	4/2/17	Scaffold	Broad Institute	SAMN02356630	GCA_000534035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/035/GCA_000534035.1_Ente_cloa_UCI_50_V1	-	UCI 50
Enterobacter cloacae MGH 54	1439330	PRJNA234253	234253	Proteobacteria	Gammaproteobacteria	4.85859	56	-	JMUU01	10	4717	4485	5/19/14	4/20/17	Scaffold	Broad Institute	SAMN02581386	GCA_000692335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/335/GCA_000692335.1_Ente_cloa_MGH_54_V1	-	MGH 54
Paenibacillus amylolyticus	1451	PRJEB15262	350634	Terrabacteria group	Firmicutes	7.27372	45.6	-	FMIS01	54	6491	6269	10/26/16	7/29/17	Contig	"UNIVERSITY OF COPENHAGEN, DEPARTMENT OF BIOLOGY"	SAMEA4402497	GCA_900095775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/775/GCA_900095775.1_ASM90009577v1	-	-
Porphyrobacter donghaensis	267135	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	3.67169	66.9	-	LSJK01	301	3566	3349	2/10/16	4/4/17	Contig	Georgia Institute of Technology	SAMN04299461	GCA_001556715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/715/GCA_001556715.1_ASM155671v1	-	CCH6-E1
Candidatus Kryptonium thompsoni	1633631	PRJEB11715	301864	FCB group	Candidatus Kryptonia	2.08499	37.4	-	CZVJ01	142	2073	1851	11/11/15	4/11/17	Scaffold	DOE - Joint Genome Institute	SAMN03436041	GCA_001536085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/085/GCA_001536085.1_JGI_assembly	-	JGI-12
Burkholderia anthina	179879	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.5134	67	-	LOZY01	59	6974	6595	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449334	GCA_001527785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/785/GCA_001527785.1_ASM152778v1	-	MSMB1496
Burkholderia pseudomultivorans	1207504	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.74115	66.9	-	LPJR01	99	7162	6793	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449596	GCA_001532035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/035/GCA_001532035.1_ASM153203v1	-	MSMB368WGS
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.52636	67.6	-	LPAO01	74	6846	6500	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449351	GCA_001526995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/995/GCA_001526995.1_ASM152699v1	-	MSMB1604WGS
Burkholderia diffusa	488732	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.81107	66.5	-	LOYB01	58	6282	5978	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449284	GCA_001524705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/705/GCA_001524705.1_ASM152470v1	-	MSMB1060
Elizabethkingia genomosp. 3	1756149	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	4.22977	35.8	-	LNOJ01	27	3914	3817	1/21/16	4/11/17	Scaffold	CDC	SAMN04254558	GCA_001521735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/735/GCA_001521735.1_ASM152173v1	26966213	G4075
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.02629	66.7	-	LOTG01	99	6536	6238	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449142	GCA_001522365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/365/GCA_001522365.1_ASM152236v1	-	RF23-BP69
Halobacterium hubeiense	1407499	PRJEB8631	319516	Euryarchaeota	Halobacteria	3.23341	66.4	-	CEML01	18	3388	3200	4/24/16	7/28/17	Scaffold	UH	SAMEA3268807	GCA_900003575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/003/575/GCA_900003575.1_ASM90000357v1	-	JI20-4
Pelotomaculum sp. UBA3955	1947066	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.06607	49.6	-	DGDJ01	181	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452262	GCA_002385385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/385/GCA_002385385.1_ASM238538v1	28894102	-
Halothiobacillus sp. 24-54-40	1970385	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	2.52856	53.5	-	NCHR01	109	2456	2353	8/16/17	8/16/17	Scaffold	None	SAMN06622263	GCA_002257325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/325/GCA_002257325.1_ASM225732v1	-	-
Enterobacter xiangfangensis	1296536	PRJNA278431	278431	Proteobacteria	Gammaproteobacteria	4.71985	55.4	-	LDQP01	33	4522	4344	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401403	GCA_001475855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/855/GCA_001475855.1_ASM147585v1	26793183	NS49
Vibrio cholerae O1 biovar El Tor	686	PRJNA255708	255708	Proteobacteria	Gammaproteobacteria	4.09194	47.521	chromosome I:NZ_CP009042.1/CP009042.1; chromosome II:NZ_CP009041.1/CP009041.1	-	2	3899	3671	3/26/15	3/25/17	Complete Genome	ICDC	SAMN02928187	GCA_000963555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/555/GCA_000963555.1_ASM96355v1	25768799	FJ147
Enterobacter kobei	208224	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.91528	54.8	-	LDCJ01	107	4899	4597	5/21/15	4/3/17	Contig	JCVI	SAMN03495973	GCA_001011785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/785/GCA_001011785.1_ASM101178v1	-	GN02186
Nitrospira sp. HN-bin3	1827378	PRJNA315256	315256	Nitrospirae	Nitrospira	2.90983	55.8	-	LVWU01	357	3028	2398	4/10/17	4/24/17	Scaffold	The University Hong Kong	SAMN04592456	GCA_002083355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/355/GCA_002083355.1_ASM208335v1	28390307	-
Candidatus Kryptobacter tengchongensis	1643429	PRJNA279030	279030	FCB group	Candidatus Kryptonia	2.68069	36.4	-	LDXW01	16	-	-	11/12/15	11/12/15	Contig	DOE Joint Genome Institute	SAMN03436305	GCA_001442865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/865/GCA_001442865.1_ASM144286v1	-	-
Bacillus paralicheniformis	1648923	PRJNA282685	282685	Terrabacteria group	Firmicutes	4.52066	45.8	-	LBMN02	39	4616	4375	6/29/15	4/4/17	Contig	NCAUR-ARS-USDA	SAMN03573918	GCA_001042485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/485/GCA_001042485.2_ASM104248v2	26296568	KJ-16
Lactobacillus aviarius	1606	PRJNA316009	316009	Terrabacteria group	Firmicutes	1.61176	40.1	-	LWUE01	72	1565	1472	6/2/16	4/5/17	Contig	University of Minnesota	SAMN04573032	GCA_001654625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/654/625/GCA_001654625.1_ASM165462v1	-	UMNLAv12
Lactobacillus taiwanensis	508451	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.14383	33.9	-	NGNZ01	74	2130	1905	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848431	GCA_002253095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/095/GCA_002253095.1_ASM225309v1	-	601y
Lactobacillus parabuchneri	152331	PRJNA320351	320351	Terrabacteria group	Firmicutes	2.68934	43.3	-	LXUG01	74	2578	2424	7/18/16	4/5/17	Contig	Instituto de Productos Lacteos de Asturias (IPLA-CSIC)	SAMN04992858	GCA_001687145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/145/GCA_001687145.1_LpbC10	-	IPLA 11150
Ferrovum sp. 34-44-207	1970376	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	1.99344	44.2	-	NCJZ01	58	2060	1802	8/16/17	8/16/17	Scaffold	None	SAMN06622203	GCA_002279055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/055/GCA_002279055.1_ASM227905v1	-	-
Phenylobacterium sp. CCH12-B4	1768784	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	5.38778	69.5	-	LSKE01	251	5282	5012	2/10/16	4/12/17	Contig	Georgia Institute of Technology	SAMN04299481	GCA_001557375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/375/GCA_001557375.1_ASM155737v1	-	CCH12-B4
Aureimonas sp. AU12	1638161	PRJDB3816	300645	Proteobacteria	Alphaproteobacteria	4.66765	67.7	-	BBWH01	94	4279	4131	11/7/15	4/11/17	Contig	"Graduate School of Life Sciences, Tohoku University"	SAMD00028755	GCA_001463705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/705/GCA_001463705.1_ASM146370v1	26534993	AU12
Rathayibacter sp. VKM Ac-2121	1891671	PRJEB20440	382928	Terrabacteria group	Actinobacteria	3.94646	71.6	-	FXBM01	5	3673	3576	4/21/17	5/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06295885	GCA_900177245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/245/GCA_900177245.1_IMG-taxon_2708742461_annotated_assembly	-	VKM Ac-2121
Agromyces sp. CF514	1881031	PRJEB17290	351469	Terrabacteria group	Actinobacteria	4.29847	70.8	-	FOZD01	4	3868	3756	11/1/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428970	GCA_900113185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/185/GCA_900113185.1_IMG-taxon_2690315658_annotated_assembly	-	CF514
Agreia sp. VKM Ac-1783	1938889	PRJEB20277	381736	Terrabacteria group	Actinobacteria	3.76243	65.8	-	FXWI01	7	3588	3500	5/13/17	5/24/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06295943	GCA_900177765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/765/GCA_900177765.1_IMG-taxon_2708742470_annotated_assembly	-	VKM Ac-1783
Kocuria kristinae	37923	PRJNA278176	278176	Terrabacteria group	Actinobacteria	2.29674	71.8	-	LDRD01	159	2058	1909	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401340	GCA_001476195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/195/GCA_001476195.1_ASM147619v1	26793183	RSA28
Duganella sp. HH105	1781067	PRJNA309033	309033	Proteobacteria	Betaproteobacteria	7.41622	64.1	-	LRHV01	89	6384	6141	10/11/16	4/17/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04320694	GCA_001758545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/545/GCA_001758545.1_ASM175854v1	27833590	HH105
Mycobacterium gordonae	1778	PRJNA338014	338014	Terrabacteria group	Actinobacteria	7.29353	66.6	-	MIHG01	446	6841	6150	9/9/16	4/13/17	Scaffold	UW	SAMN05730078	GCA_001722405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/405/GCA_001722405.1_ASM172240v1	-	HMC_M15
Methanosaeta sp. NSM2	1917473	PRJNA338276	338276	Euryarchaeota	Methanomicrobia	1.7516	54.7	-	NOLD01	238	1920	1920	8/16/17	8/16/17	Scaffold	The Ohio State University	SAMN05908749	GCA_002256575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/575/GCA_002256575.1_ASM225657v1	-	-
Mycobacterium peregrinum	43304	PRJNA382269	382269	Terrabacteria group	Actinobacteria	6.93185	66.2	-	NCSV01	216	6791	6473	6/19/17	8/24/17	Scaffold	National Institute for Communicable Diseases	SAMN06702994	GCA_002198105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/105/GCA_002198105.1_ASM219810v1	28774988	TRL0025866
Pseudomonas congelans	200452	PRJNA387592	387592	Proteobacteria	Gammaproteobacteria	5.63666	59.3	-	NQXY01	334	5221	5014	9/20/17	9/23/17	Contig	Max Planck Institute 	SAMN07158964	GCA_002323035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/035/GCA_002323035.1_ASM232303v1	28880925	ME812.2b
Vibrio cholerae O1 str. KW3	1433144	PRJNA215281	215281	Proteobacteria	Gammaproteobacteria	4.08902	47.5207	chromosome I:NZ_CP006947.1/CP006947.1; chromosome II:NZ_CP006948.1/CP006948.1	-	2	3889	3702	10/16/15	3/26/17	Complete Genome	Harvard Medical School	SAMN04191514	GCA_001318185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/185/GCA_001318185.1_ASM131818v1	22750883	KW3
Idiomarina abyssalis	86102	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.54894	45.7	-	DELL01	117	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451356	GCA_002354395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/395/GCA_002354395.1_ASM235439v1	28894102	-
Brachybacterium sp. sponge	1775432	PRJNA306808	306808	Terrabacteria group	Actinobacteria	3.9225	72.3	-	LRMP01	10	3486	3374	4/7/16	4/12/17	Contig	SJTU	SAMN04364303	GCA_001613775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/775/GCA_001613775.1_ASM161377v1	-	sponge
Vibrio cholerae O1 str. 2010EL-1786	914149	PRJNA59943	59943	Proteobacteria	Gammaproteobacteria	4.07774	47.5204	chromosome 1:NC_016445.1/CP003069.1; chromosome 2:NC_016446.1/CP003070.1	-	2	3872	3705	11/10/11	3/22/17	Complete Genome	Centers for Disease Control and Prevention	SAMN00765529	GCA_000166455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/455/GCA_000166455.2_ASM16645v2	22099115	2010EL-1786
Dysgonomonas sp. 37-18	1895907	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	4.41079	37.3	-	MKVC01	50	3700	3581	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660597	GCA_001899125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/125/GCA_001899125.1_ASM189912v1	-	-
Lactobacillus agilis	1601	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.18906	41.3	-	LYQQ01	103	2216	2021	7/14/17	7/17/17	Scaffold	University of Minnesota	SAMN04498972	GCA_002218725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/725/GCA_002218725.1_ASM221872v1	-	UMNLA8
Trabulsiella odontotermitis	379893	PRJNA291074	291074	Proteobacteria	Gammaproteobacteria	4.62143	54.8	-	LIFU01	51	4396	4175	9/23/15	4/4/17	Scaffold	IBT-UNAM	SAMN03943319	GCA_001297845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/845/GCA_001297845.1_ASM129784v1	26543120	TbO1.1
Mycobacterium conceptionense	451644	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.3861	66.5	-	LZKA01	96	6171	5995	6/17/16	4/5/17	Contig	JCVI	SAMN04634254	GCA_001667965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/965/GCA_001667965.1_ASM166796v1	-	ACS2998
Bacillus marisflavi	189381	PRJEB19431	374830	Terrabacteria group	Firmicutes	4.33193	48.3	-	FVYY01	9	4408	4261	3/10/17	3/18/17	Contig	URMITE	SAMEA89868418	GCA_900166615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/615/GCA_900166615.1_PRJEB19431	-	Marseille-P794
Mycobacterium sinense	875328	PRJNA305922	305922	Terrabacteria group	Actinobacteria	4.69522	68.4	-	LZMF01	152	4490	4229	6/17/16	4/13/17	Contig	JCVI	SAMN04634186	GCA_001673565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/565/GCA_001673565.1_ASM167356v1	-	1274684.2
Bacillus circulans	1397	PRJNA395369	395369	Terrabacteria group	Firmicutes	5.03451	35.5	-	NPBG01	266	4757	4611	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372677	GCA_002272125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/125/GCA_002272125.1_assembly-7506_v1	-	7506
Mycobacterium heraklionense	512402	PRJNA285002	285002	Terrabacteria group	Actinobacteria	5.10975	67.9	-	LDPO01	75	4839	4594	6/8/15	4/10/17	Scaffold	UCSF	SAMN03734870	GCA_001021505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/505/GCA_001021505.1_ASM102150v1	26205863	Davo
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJNA201959	201959	Proteobacteria	Gammaproteobacteria	5.24182	57.7	-	AYIV01	2	5200	4943	10/30/13	7/24/17	Scaffold	Broad Institute	SAMN02138584	GCA_000492795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/795/GCA_000492795.1_Kleb_pneu_MGH_44_V1	-	MGH 44
Arsukibacterium sp. UBA4212	1946061	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.83258	48.4	-	DFTM01	17	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450689	GCA_002381465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/465/GCA_002381465.1_ASM238146v1	28894102	-
Staphylococcus argenteus	985002	PRJEB6386	256284	Terrabacteria group	Firmicutes	2.71533	32.3	-	CCEF01	19	2689	2512	9/6/14	4/2/17	Contig	WTSI	SAMEA2039165	GCA_000751995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/995/GCA_000751995.1_SaM260_MSHR	-	-
Vulcanisaeta sp. OSP_8	1714252	PRJNA295311	295311	TACK group	Crenarchaeota	1.4535	45.5	-	LOCF01	128	1642	1228	1/15/16	1/15/16	Scaffold	Montana State University	SAMN04045678	GCA_001515905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/905/GCA_001515905.1_ASM151590v1	-	-
Aliivibrio wodanis	80852	PRJNA302718	302718	Proteobacteria	Gammaproteobacteria	4.66034	38.2	-	LNRM01	79	4247	4070	2/10/16	4/4/17	Contig	University of Cambridge	SAMN04279307	GCA_001557935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/935/GCA_001557935.1_ASM155793v1	-	CL6
Moritella viscosa	80854	PRJEB16014	348508	Proteobacteria	Gammaproteobacteria	5.31114	39.1	-	FPLD01	178	4805	4493	11/24/16	4/11/17	Contig	UNIVERSITY OF TROMSO	SAMEA4520415	GCA_900120035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/035/GCA_900120035.1_clc.v6.5.NVI5450.01	-	-
Tatlockia micdadei	451	PRJEB15837	347754	Proteobacteria	Gammaproteobacteria	3.2894	40.4	-	FMVN01	27	2968	2848	10/17/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02982997	GCA_900102325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/325/GCA_900102325.1_IMG-taxon_2596583693_annotated_assembly	-	ATCC 33218
Photobacterium kishitanii	318456	PRJNA302718	302718	Proteobacteria	Gammaproteobacteria	5.00036	38.8	-	LNTE01	115	4476	4266	12/3/15	4/4/17	Contig	University of Cambridge	SAMN04277301	GCA_001455895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/895/GCA_001455895.1_ASM145589v1	-	201212X
Aneurinibacillus migulanus	47500	PRJEB6534	292983	Terrabacteria group	Firmicutes	6.297	43.1	-	CCMI01	200	6345	5980	8/15/15	4/21/17	Scaffold	ERA7	SAMEA2602669	GCA_001282925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/925/GCA_001282925.1_A1	-	-
Mycobacterium immunogenum	83262	PRJNA294421	294421	Terrabacteria group	Actinobacteria	5.71913	64	-	LJFO01	46	5751	5576	9/22/15	4/4/17	Contig	US EPA	SAMN04025492	GCA_001296275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/275/GCA_001296275.1_ASM129627v1	26744376	H008
Frigoribacterium sp. Leaf415	1736372	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.42318	71.3	-	LMQR01	4	3205	3113	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151762	GCA_001424645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/645/GCA_001424645.1_Leaf415	26633631	Leaf415
Pandoraea apista	93218	PRJNA381452	381452	Proteobacteria	Betaproteobacteria	5.72449	62.7	-	NBTA01	23	5185	4980	8/1/17	8/3/17	Contig	Public Health England	SAMN06677536	GCA_002238015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/015/GCA_002238015.1_ASM223801v1	-	Pa16226
Enterobacter ludwigii	299767	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.80419	54.5	-	JVAG01	222	4712	4454	7/10/15	4/3/17	Contig	University of Washington	SAMN03197808	GCA_001057535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/535/GCA_001057535.1_ASM105753v1	26230489	608_ECLO
Chromobacterium subtsugae	251747	PRJNA280633	280633	Proteobacteria	Betaproteobacteria	4.66527	64.9	-	LCWP01	50	4301	4152	6/5/15	4/3/17	Contig	Midwestern University	SAMN03649650	GCA_001020585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/585/GCA_001020585.1_ASM102058v1	26358592	MWU2920
Pseudomonas frederiksbergensis	104087	PRJEB15108	347745	Proteobacteria	Gammaproteobacteria	6.45859	59.4	-	FMHR01	29	6018	5777	10/10/16	5/31/17	Contig	OAK RIDGE NATIONAL LABORATORY	SAMEA4383249	GCA_900095375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/375/GCA_900095375.1_ASM90009537v1	-	-
Fusobacterium hwasookii ChDC F174	1307442	PRJNA193583	193583	Fusobacteria	Fusobacteriia	2.46577	26.9	-	ATKF01	118	2357	2214	8/29/13	4/1/17	Contig	Dental School of Chosun University	SAMN02469580	GCA_000455885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/885/GCA_000455885.1_de_novo	24459284	ChDC F174
Leisingera sp. ANG-M6	1577900	PRJNA269051	269051	Proteobacteria	Alphaproteobacteria	4.54251	62.7	-	JWLG01	54	4321	4216	1/2/15	4/10/17	Scaffold	University of Connecticut	SAMN03246063	GCA_000813905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/905/GCA_000813905.1_ASM81390v1	25755651	ANG-M6
Clostridium baratii	1561	PRJNA275411	275411	Terrabacteria group	Firmicutes	3.17317	28	-	JZTY01	39	3019	2926	3/25/15	4/3/17	Scaffold	Institut Pasteur	SAMN03344100	GCA_000962755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/755/GCA_000962755.1_ASM96275v1	-	771-14
Citrobacter braakii	57706	PRJNA369027	369027	Proteobacteria	Gammaproteobacteria	5.57558	51.9	-	NAEW01	107	5598	5251	3/30/17	4/3/17	Contig	"Faculty of Pharmacy, University of Porto"	SAMN06219870	GCA_002075345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/345/GCA_002075345.1_ASM207534v1	-	ATCC 51113
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.71054	50.9	-	MPQH01	48	2633	2544	3/6/17	3/9/17	Contig	Harvard University	SAMN06016254	GCA_002020455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/455/GCA_002020455.1_ASM202045v1	-	-
Bacillus aryabhattai	412384	PRJNA285382	285382	Terrabacteria group	Firmicutes	5.49922	37.8	-	LDUV01	109	5653	5486	6/30/15	4/3/17	Contig	University of Malaya	SAMN03751011	GCA_001043825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/825/GCA_001043825.1_ASM104382v1	-	LK20
Pseudomonas mediterranea	183795	PRJNA290284	290284	Proteobacteria	Gammaproteobacteria	6.29933	61.2	-	LIGN01	91	5574	5426	10/23/15	4/11/17	Scaffold	Technological Educational Institute of Crete	SAMN03879933	GCA_001412185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/185/GCA_001412185.1_ASM141218v1	26300874	TEIC1105
Elizabethkingia miricola	172045	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	4.42197	35.9	-	MAIB01	21	4104	4010	3/8/17	3/10/17	Contig	CDC	SAMN05281843	GCA_002023475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/475/GCA_002023475.1_ASM202347v1	-	G4121
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	7.29434	43.9	-	MKQP01	111	6509	6343	1/18/17	4/6/17	Contig	Cornell University	SAMN05772518	GCA_001954365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/365/GCA_001954365.1_ASM195436v1	-	FSL H7-0604
Achromobacter sp. HMSC070F04	1739276	PRJNA299926	299926	Proteobacteria	Betaproteobacteria	6.74142	67.5	-	LTGY01	98	6222	6010	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477589	GCA_001810925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/925/GCA_001810925.1_ASM181092v1	-	HMSC070F04
Vibrio cholerae	666	PRJNA301765	301765	Proteobacteria	Gammaproteobacteria	4.11044	47.518	chromosome:NZ_CP013311.1/CP013311.1; chromosome 2:NZ_CP013312.1/CP013312.1	-	2	3994	3756	11/30/16	3/28/17	Complete Genome	Nankai University	SAMN04256440	GCA_001887415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/415/GCA_001887415.1_ASM188741v1	27849586	E1320
Sulfuricurvum sp. RIFCSPLOWO2_12_FULL_43_24	1802247	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.30504	43.4	-	MIBT01	128	2379	2254	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315807	GCA_001829605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/605/GCA_001829605.1_ASM182960v1	27774985	-
Luteibacter sp. UNC138MFCol5.1	1502774	PRJEB16862	351020	Proteobacteria	Gammaproteobacteria	4.21951	67.6	-	FODZ01	16	3832	3720	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02800692	GCA_900110505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/505/GCA_900110505.1_IMG-taxon_2593339266_annotated_assembly	-	UNC138MFCol5.1
Acetobacter malorum	178901	PRJNA253128	253128	Proteobacteria	Alphaproteobacteria	3.08888	57.7	-	JOPG01	111	2782	2631	5/19/17	5/24/17	Contig	Cornell University	SAMN02866235	GCA_002153605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/605/GCA_002153605.1_DsW_057	-	DsW_057
Serratia nematodiphila DZ0503SBS1	1449981	PRJNA235241	235241	Proteobacteria	Gammaproteobacteria	5.53894	58.5	-	JELU01	2516	5082	2717	4/10/17	4/10/17	Contig	"kyungpook National University, Daegu, South Korea"	SAMN02641978	GCA_002082525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/525/GCA_002082525.1_SeNem1.0	-	DZ0503SBS1
Nonlabens ulvanivorans	906888	PRJDB1693	252066	FCB group	Bacteroidetes/Chlorobi group	3.25886	35.1	-	BBNT01	50	3093	2416	10/2/14	4/9/17	Contig	The University of Tokyo	SAMD00017320	GCA_000764815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/815/GCA_000764815.1_ASM76481v1	25395639	JCM 19275
Caballeronia sordidicola	196367	PRJNA355372	355372	Proteobacteria	Betaproteobacteria	9.74657	59.5	-	MTHB01	307	8971	8276	7/17/17	7/19/17	Contig	Pukyong National University	SAMN06075480	GCA_002220365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/365/GCA_002220365.1_ASM222036v1	-	PAMC 26633
Vibrio metoecus	1481663	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	4.01664	46.8	-	NMSM01	77	3926	3706	8/31/17	9/2/17	Contig	University of Alberta	SAMN07350496	GCA_002283905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/905/GCA_002283905.1_ASM228390v1	-	OYP9B03
Alteromonas australica	589873	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.85773	44.2	-	DCMY01	370	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454486	GCA_002321865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/865/GCA_002321865.1_ASM232186v1	28894102	-
Streptomyces albidoflavus	1886	PRJNA398273	398273	Terrabacteria group	Actinobacteria	7.02924	73	-	NVPY01	957	6719	5735	9/20/17	9/22/17	Contig	The University of Queensland 	SAMN07505023	GCA_002317035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/035/GCA_002317035.1_CMB-CS143	-	143
Kitasatospora aureofaciens	1894	PRJNA253814	253814	Terrabacteria group	Actinobacteria	9.22816	72.7	-	JPRF03	107	8191	7651	7/29/15	3/13/17	Contig	University of Nebraska - Lincoln	SAMN02893937	GCA_001188955.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/955/GCA_001188955.3_ASM118895v3	-	ATCC 10762
Hymenobacter sp. IS2118	1505605	PRJNA251571	251571	FCB group	Bacteroidetes/Chlorobi group	5.26242	60.7	-	JNLX01	198	4528	4328	6/30/14	4/9/17	Contig	University of Alabama at Birmingham	SAMN02837163	GCA_000715495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/495/GCA_000715495.1_ASM71549v1	25103756	IS2118
Synergistes jonesii	2754	PRJNA258245	258245	Synergistetes	Synergistia	2.57572	56.5	-	JPZR01	64	2437	2352	10/11/16	4/13/17	Contig	CSIRO	SAMN02991090	GCA_001757565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/565/GCA_001757565.1_ASM175756v1	-	147-1
Kitasatospora sp. MBT63	1444768	PRJNA233559	233559	Terrabacteria group	Actinobacteria	9.8517	72.9	-	JAIZ01	846	8919	7981	6/19/14	4/11/17	Scaffold	"Institute of Biology, Leiden University"	SAMN02570253	GCA_000710465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/465/GCA_000710465.2_KspMBT63_1.0	24958203	MBT63
Bosea sp. Leaf344	1736346	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.35092	68.2	-	LMRT01	16	4047	3944	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151736	GCA_001426225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/225/GCA_001426225.1_Leaf344	26633631	Leaf344
Pseudomonas simiae	321846	PRJNA307220	307220	Proteobacteria	Gammaproteobacteria	6.26547	59.7	-	LUXZ01	124	5615	3974	5/10/16	5/10/16	Contig	RAJIV GANDHI CENTRE FOR BIOTECHNOLOGY	SAMN04517449	GCA_001641325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/325/GCA_001641325.1_ASM164132v1	-	RGCB 73
Edwardsiella piscicida	1263550	PRJNA353909	353909	Proteobacteria	Gammaproteobacteria	3.84163	59.7	-	MPNU01	2	3532	3341	12/9/16	3/2/17	Scaffold	Universidade de Santiago de Compostela	SAMN06028227	GCA_001896205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/205/GCA_001896205.1_ASM189620v1	28209828	ACC35.1
Gemmatimonas sp. 13_1_20CM_3_60_15	1805208	PRJNA297196	297196	FCB group	Gemmatimonadetes	0.791431	60.4	-	MNJI01	287	832	621	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327727	GCA_001920195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/195/GCA_001920195.1_ASM192019v1	27843720	-
Mycoplasma hyosynoviae	29559	PRJNA238376	238376	Terrabacteria group	Tenericutes	0.892195	27	-	JFKI01	48	721	647	5/15/14	4/2/17	Contig	"Newport Laboratories, A Sanofi Company"	SAMN02673698	GCA_000691345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/345/GCA_000691345.1_MhyoNPL4v1.0_of_Mycoplasma_hyosynoviae_strain_NPL4_genome	24903877	NPL4
Devosia sp. Root436	1736537	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	3.91913	63.8	-	LMEM01	16	3821	3730	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155806	GCA_001426345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/345/GCA_001426345.1_Root436	26633631	Root436
Lactobacillus kunkeei DSM 12361 = ATCC 700308	1423768	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.5139	36.4	-	AZCK01	23	1395	1339	11/6/15	4/4/17	Scaffold	Shanghai Majorbio	SAMN02369503	GCA_001433825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/825/GCA_001433825.1_ASM143382v1	26415554	DSM 12361
Pseudomonas moraviensis	321662	PRJNA327387	327387	Proteobacteria	Gammaproteobacteria	6.01649	60	-	MAYQ01	7	5367	5201	7/21/16	4/13/17	Scaffold	Oklahoma State University	SAMN05332130	GCA_001691585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/585/GCA_001691585.1_ASM169158v1	-	Devor
Geobacillus thermocatenulatus	33938	PRJNA354604	354604	Terrabacteria group	Firmicutes	3.55358	52.4	-	NAGF01	363	3795	3260	4/3/17	4/5/17	Scaffold	"Jet Propulsion Laboratory, California Institute of Technology"	SAMN06347034	GCA_002077835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/835/GCA_002077835.1_ASM207783v1	-	SURF-189
Lactobacillus paralimentarius	83526	PRJNA376482	376482	Terrabacteria group	Firmicutes	2.88589	35.3	-	MYFM01	29	2820	2717	6/8/17	6/10/17	Contig	"ChunLab, Inc."	SAMN06434170	GCA_002179915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/915/GCA_002179915.1_ASM217991v1	-	KACC 16343
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.094	42.2	-	FTQC01	1	990	914	3/18/17	3/24/17	Contig	Functional Genomics Genter Zurich	SAMEA4555948	GCA_900149385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/385/GCA_900149385.1_4-29b	-	-
Mycobacterium vulneris	547163	PRJNA354248	354248	Terrabacteria group	Actinobacteria	6.26672	66.8	-	NCXM01	133	5889	5547	4/21/17	4/24/17	Contig	San Raffaele Scientific Institute	SAMN06651660	GCA_002104765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/765/GCA_002104765.1_ASM210476v1	-	DSM 45247
Lactobacillus gallinarum	52242	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.02052	36.5	-	NFLS01	88	2066	1840	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473587	GCA_002161035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/035/GCA_002161035.1_ASM216103v1	-	An115
Lysinibacillus sp. FJAT-14745	1704289	PRJNA293395	293395	Terrabacteria group	Firmicutes	5.15715	37.2	-	LITM01	29	4891	4627	8/31/15	4/11/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04002530	GCA_001275675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/675/GCA_001275675.1_ASM127567v1	-	FJAT-14745
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.74118	35.1	-	LZGO01	85	2492	2372	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179583	GCA_001690235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/235/GCA_001690235.1_ASM169023v1	-	wkB292
Candidatus Accumulibacter sp. BA-92	1454003	PRJNA236438	236438	Proteobacteria	Betaproteobacteria	4.94794	62.7	-	JEMX01	218	4298	4267	3/3/14	3/3/14	Contig	Australian Centre for Ecogenomics	SAMN02445066	GCA_000585055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/055/GCA_000585055.1_capba92	-	-
Ensifer adhaerens	106592	PRJNA356665	356665	Proteobacteria	Alphaproteobacteria	7.33099	62.2	-	MRVD01	204	7192	6316	12/19/16	12/19/16	Scaffold	Zhejiang University	SAMN06118451	GCA_001938465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/465/GCA_001938465.1_ASM193846v1	-	X097
Streptococcus oralis subsp. dentisani	1458253	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.94124	41.2	-	NCUX01	33	1906	1793	4/18/17	4/21/17	Scaffold	Slagelse Hospital	SAMN06705611	GCA_002096615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/615/GCA_002096615.1_ASM209661v1	27325438	RH_9883_08
Lebetimonas sp. JS170	990073	PRJNA208428	208428	Proteobacteria	delta/epsilon subdivisions	1.74047	31.3	-	ATHU01	5	1872	1787	1/24/14	4/17/17	Contig	Marine Biological Lab	SAMN02203850	GCA_000523355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/355/GCA_000523355.1_LebetimonasJS170	24257443	JS170
Aphanizomenon flos-aquae LD13	1710894	PRJNA294801	294801	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.43945	37.1	-	LJOY01	307	4006	3787	6/20/16	6/20/16	Contig	Oregon State University	SAMN04028819	GCA_001672165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/165/GCA_001672165.1_ASM167216v1	-	-
Pseudomonas corrugata CFBP 5454	1316927	PRJNA196427	196427	Proteobacteria	Gammaproteobacteria	6.19389	60.5	-	ATKI01	157	5521	5342	1/23/14	4/2/17	Contig	Parco Scientifico e tecnologico della Sicilia s.c.p.a.	SAMN02641555	GCA_000522485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/485/GCA_000522485.1_Pco1	24548462	CFBP 5454
Vibrio cholerae	666	PRJNA301765	301765	Proteobacteria	Gammaproteobacteria	4.05752	47.5164	chromosome 1:NZ_CP013303.1/CP013303.1; chromosome 2:NZ_CP013304.1/CP013304.1	-	2	3893	3705	11/30/16	3/28/17	Complete Genome	Nankai University	SAMN04256434	GCA_001887435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/435/GCA_001887435.1_ASM188743v1	27849586	CRC711
Staphylococcus cohnii	29382	PRJNA311173	311173	Terrabacteria group	Firmicutes	2.58419	32.5	-	LSKX01	75	2468	2369	5/25/16	4/5/17	Contig	Nofima	SAMN04479463	GCA_001651275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/275/GCA_001651275.1_ASM165127v1	27375578	MF1844
Aeromonas dhakensis	196024	PRJEB7048	267819	Proteobacteria	Gammaproteobacteria	4.71188	61.8	-	CDBH01	73	4365	4180	11/24/14	4/10/17	Scaffold	UCONNMISEQ	SAMEA2752400	GCA_000820305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/305/GCA_000820305.1_PRJEB7048	-	CIP 107500
Pseudoalteromonas lipolytica	570156	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.75394	40.8	-	DBGW01	156	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450581	GCA_002295535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/535/GCA_002295535.1_ASM229553v1	28894102	-
Candidatus Synechococcus spongiarum 142	1608213	PRJNA273429	273429	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.27141	58.4	-	JXUO01	326	2225	2010	5/14/15	7/8/15	Scaffold	Haifa University- The Leon H. Charney School of Marine Sciences	SAMN03291887	GCA_001007625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/625/GCA_001007625.1_ASM100762v1	26037118	-
Salinivibrio sp. MA421	1909454	PRJNA368691	368691	Proteobacteria	Gammaproteobacteria	3.5359	50.4	-	MUER01	70	3279	3105	2/14/17	4/17/17	Contig	Universidad de Sevilla	SAMN06270081	GCA_001995635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/635/GCA_001995635.1_ASM199563v1	-	MA421
Methylibium sp. YR605	1500265	PRJNA247590	247590	Proteobacteria	Betaproteobacteria	6.73741	69.2	-	JUHA01	58	6178	6010	12/9/14	4/10/17	Scaffold	DOE Joint Genome Institute	SAMN02787082	GCA_000800095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/095/GCA_000800095.1_ASM80009v1	-	YR605
Pandoraea pnomenusa	93220	PRJNA213899	213899	Proteobacteria	Betaproteobacteria	5.3457	64.9	-	AUZF01	113	4820	4642	1/24/14	4/2/17	Contig	UNIVERSITY OF MALAYA	SAMN02641598	GCA_000523065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/065/GCA_000523065.1_De_Novo_Assembly	-	RB-44
Smithella sp. SDB	1735324	PRJNA293354	293354	Proteobacteria	delta/epsilon subdivisions	2.9719	41.4	-	LKUC01	398	2833	2594	10/26/15	10/26/15	Contig	University of Oklahoma	SAMN04125644	GCA_001412345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/345/GCA_001412345.1_ASM141234v1	-	-
Bacillus toyonensis	155322	PRJNA356695	356695	Terrabacteria group	Firmicutes	5.87519	34.9	-	MSAB01	46	6244	5822	4/25/17	4/27/17	Scaffold	Oswaldo Cruz Foundation	SAMN06119668	GCA_002109455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/455/GCA_002109455.1_ASM210945v1	-	BacAer
Kandleria vitulina	1630	PRJEB16586	349874	Terrabacteria group	Firmicutes	2.1334	35	-	FNNF01	61	2182	2047	10/22/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487759	GCA_900106815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/815/GCA_900106815.1_IMG-taxon_2606217761_annotated_assembly	-	S3b
Pseudobutyrivibrio sp. AR14	1520804	PRJEB15745	347672	Terrabacteria group	Firmicutes	3.05326	38.8	-	FMUY01	46	2834	2732	10/17/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660668	GCA_900101325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/325/GCA_900101325.1_IMG-taxon_2596583543_annotated_assembly	-	AR14
Pseudomonas mosselii	78327	PRJNA311277	311277	Proteobacteria	Gammaproteobacteria	5.45688	64.6	-	LSLE01	65	4991	4855	2/17/16	4/11/17	Scaffold	University of Leuven	SAMN04481375	GCA_001562525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/525/GCA_001562525.1_ASM156252v1	27081131	BW11M1
Pantoea dispersa	59814	PRJNA278241	278241	Proteobacteria	Gammaproteobacteria	4.90615	57.6	-	LDSD01	52	4560	4399	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401406	GCA_001476745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/745/GCA_001476745.1_ASM147674v1	26793183	SA2
Virgibacillus sp. 7505	2022548	PRJNA395369	395369	Terrabacteria group	Firmicutes	3.65657	43.9	-	NPBF01	578	3572	3494	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372676	GCA_002272135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/135/GCA_002272135.1_assembly-7505_v1	-	7505
Clostridium saccharobutylicum DSM 13864	1345695	PRJNA210726	210726	Terrabacteria group	Firmicutes	4.9652	28.4	-	AYXL01	340	4341	4024	6/3/16	4/5/17	Contig	jiangnanuniversity	SAMN02251455	GCA_001657435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/435/GCA_001657435.1_ASM165743v1	26915224	DSM 13864
Odoribacter sp. UBA944	1947012	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.47643	50.7	-	DBDA01	51	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06454460	GCA_002293375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/375/GCA_002293375.1_ASM229337v1	28894102	-
Acetobacter sp. DsW_47	1670659	PRJNA253128	253128	Proteobacteria	Alphaproteobacteria	3.24272	54.3	-	JOMQ01	174	2973	2810	5/19/17	5/24/17	Contig	Cornell University	SAMN02866226	GCA_002153775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/775/GCA_002153775.1_ASM215377v1	-	DsW_47
Sutterella sp. 63_29	1897024	PRJNA321218	321218	Proteobacteria	Betaproteobacteria	2.42375	62.3	-	MNTY01	123	2141	2007	12/23/16	12/23/16	Scaffold	None	SAMN05717308	GCA_001917215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/215/GCA_001917215.1_ASM191721v1	27819664	-
Methanoculleus sp. DTU007	1671626	PRJNA283298	283298	Euryarchaeota	Methanomicrobia	2.04817	59.5	-	LFRO01	106	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03776756	GCA_001512385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/385/GCA_001512385.1_ASM151238v1	26839589	-
Roseburia sp. CAG:18	1262941	PRJEB742	206591	Terrabacteria group	Firmicutes	2.60152	44	-	CBAP01	148	2405	2378	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138568	GCA_000433615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/615/GCA_000433615.1_MGS18	-	-
Enhydrobacter sp. UBA4101	1946460	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.52514	43.8	-	DFXT01	32	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452943	GCA_002383255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/255/GCA_002383255.1_ASM238325v1	28894102	-
Burkholderia contaminans	488447	PRJNA303169	303169	Proteobacteria	Betaproteobacteria	7.99863	66.5	-	MLFG01	7	7394	7075	11/3/16	4/13/17	Contig	Universidade Federal do Parana (UFPR)	SAMN04287748	GCA_001865715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/715/GCA_001865715.1_ASM186571v1	-	LTEB
Vibrio owensii LMG 25430	1280004	PRJDB725	203002	Proteobacteria	Gammaproteobacteria	5.82496	45.5	-	BAOE01	341	5200	5046	5/14/13	4/1/17	Contig	University of Miyazaki	SAMD00036658	GCA_000400325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/325/GCA_000400325.1_ASM40032v1	23710045	LMG 25430
Serratia fonticola AU-AP2C	1332071	PRJNA202230	202230	Proteobacteria	Gammaproteobacteria	4.99982	53.8	-	ASZA01	34	4677	4507	9/17/13	4/2/17	Contig	Institute of Microbial Technology	SAMN02470002	GCA_000477615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/615/GCA_000477615.1_Serratia_fanticola	24309742	AU-AP2C
Faecalibacterium sp. CAG:82	1262898	PRJEB1016	206869	Terrabacteria group	Firmicutes	2.06751	59.1	-	CBFB01	110	1893	1856	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138617	GCA_000434595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/595/GCA_000434595.1_MGS82	-	-
Bordetella hinzii L60	1331261	PRJNA202164	202164	Proteobacteria	Betaproteobacteria	4.89672	67.1	-	JHEN01	252	4735	4445	4/30/14	4/2/17	Contig	JCVI	SAMN02231447	GCA_000657715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/715/GCA_000657715.1_gbh06v01	-	L60
Helicobacter sp. 11S03491-1	1476196	PRJNA344861	344861	Proteobacteria	delta/epsilon subdivisions	1.82785	33.8	-	MLAO01	33	1731	1660	8/28/17	8/30/17	Contig	Utrecht University	SAMN05846504	GCA_002272835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/835/GCA_002272835.1_ASM227283v1	28827684	11S03491-1
uncultured Butyricicoccus sp.	1193532	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.99908	57	-	FMGF01	52	3044	2990	8/16/16	8/16/16	Scaffold	SC	SAMEA3545390	GCA_900066805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/805/GCA_900066805.1_14207_7_50	-	-
Phaeobacter sp. 22II1-1F12B	1317111	PRJNA196728	196728	Proteobacteria	Alphaproteobacteria	5.53362	60.3	-	AQQP01	109	5262	5084	6/28/17	6/30/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN07274263	GCA_002210165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/210/165/GCA_002210165.1_ASM221016v1	-	22II1-1F12B
Sporosarcina sp. HYO08	1759557	PRJNA305448	305448	Terrabacteria group	Firmicutes	3.0517	41.8	-	LPUT01	32	3002	2901	2/18/16	4/11/17	Contig	Korea University	SAMN04325320	GCA_001563475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/475/GCA_001563475.1_ASM156347v1	-	HYO08
Nitrosospira sp. Nsp14	1855333	PRJEB17340	351571	Proteobacteria	Betaproteobacteria	3.35623	54.8	-	FOPV01	54	2997	2838	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216299	GCA_900113575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/575/GCA_900113575.1_IMG-taxon_2671180078_annotated_assembly	-	Nsp14
Pseudomonas veronii	76761	PRJNA369437	369437	Proteobacteria	Gammaproteobacteria	7.12931	60.5	-	MULN01	211	6671	5744	3/15/17	3/15/17	Contig	Hasselt University	SAMN06286308	GCA_002029325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/325/GCA_002029325.1_ASM202932v1	-	VI4T1
Pseudomonas denitrificans (nomen rejiciendum)	43306	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.95641	65.9	-	JVUY01	492	6784	6367	7/10/15	5/30/17	Scaffold	University of Washington	SAMN03197270	GCA_001061455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/455/GCA_001061455.1_ASM106145v1	26230489	1298_PDEN
Desulfobulbus sp. Dsb1	1292026	PRJNA188740	188740	Proteobacteria	delta/epsilon subdivisions	0.452719	56.6	-	AOSN01	64	-	-	5/31/13	7/29/15	Contig	Oak Ridge National Laboratory	SAMN02470752	GCA_000403905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/905/GCA_000403905.1_Dsb1	23555659	Dsb1
Kocuria sp. ICS0012	1834155	PRJNA305922	305922	Terrabacteria group	Actinobacteria	2.95343	68.6	-	LZMM01	86	2687	2506	6/17/16	4/12/17	Contig	JCVI	SAMN04634266	GCA_001665945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/945/GCA_001665945.1_ASM166594v1	-	ICS0012
Treponema pedis str. B 683	1290999	PRJNA188674	188674	Spirochaetes	Spirochaetia	2.98337	36.9	-	AOTN01	573	2815	2440	9/6/13	4/2/17	Contig	Swedish University of Agricultural Sciences	SAMN02379485	GCA_000465095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/095/GCA_000465095.1_Treponema_pedis_B_683	23977007	B 683
Halorubrum ezzemoulense	337243	PRJNA232799	232799	Euryarchaeota	Halobacteria	4.64804	66.1	-	NHOV01	1033	4568	3947	8/15/17	8/17/17	Scaffold	University of Conn.	SAMN02716049	GCA_002252735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/735/GCA_002252735.1_ASM225273v1	24782836	LG1
Brevundimonas naejangsanensis	588932	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.88331	66.9	-	DFOI01	162	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451054	GCA_002376705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/705/GCA_002376705.1_ASM237670v1	28894102	-
Sphingopyxis sp. Root214	1736491	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	4.72483	64.5	-	LMIG01	7	4464	4326	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155760	GCA_001429105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/105/GCA_001429105.1_Root214	26633631	Root214
Leifsonia sp. 467MF	1798220	PRJEB16907	351057	Terrabacteria group	Actinobacteria	4.14151	69.8	chromosome I:NZ_LT630002.1/LT630002.1	-	1	3982	3910	10/29/16	7/28/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04515685	GCA_900110095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/095/GCA_900110095.1_IMG-taxon_2639763199_annotated_assembly	-	467MF
Streptomyces lavendulae subsp. lavendulae	58340	PRJNA255388	255388	Terrabacteria group	Actinobacteria	7.84663	71.5	-	JPNY01	650	-	-	5/30/17	5/30/17	Contig	Complutense University of Madrid	SAMN02918289	GCA_002158965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/158/965/GCA_002158965.1_ASM215896v1	-	ATCC 13664
Trueperella pyogenes	1661	PRJNA374883	374883	Terrabacteria group	Actinobacteria	2.40751	59.8	-	MVGS01	104	2191	2077	3/23/17	4/6/17	Contig	Laboratorio de Imunovirologia Molecular (LIVM)	SAMN06339409	GCA_002071825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/071/825/GCA_002071825.1_ASM207182v1	-	UFV1
Micrococcus sp. CH3	1770209	PRJNA305941	305941	Terrabacteria group	Actinobacteria	2.50632	73	-	LOSP01	48	2344	2179	3/21/16	4/17/17	Scaffold	CINVESTAV-Langebio	SAMN04335742	GCA_001595505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/505/GCA_001595505.1_ASM159550v1	-	CH3
Lysobacter sp. Root76	1736598	PRJNA297942	297942	Proteobacteria	Gammaproteobacteria	4.36198	68.5	-	LMIK01	11	3901	3785	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155867	GCA_001428685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/685/GCA_001428685.1_Root76	26633631	Root76
Ensifer sp. Root1252	1736438	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	7.72207	61.1	-	LMDT01	59	7428	7033	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155707	GCA_001425885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/885/GCA_001425885.1_Root1252	26633631	Root1252
Bifidobacterium pseudolongum subsp. pseudolongum	31954	PRJNA239857	239857	Terrabacteria group	Actinobacteria	1.89868	63.1	-	JGZH01	11	1616	1475	8/18/14	4/2/17	Contig	University of Parma	SAMN02673445	GCA_000741325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/325/GCA_000741325.1_Bifpse_sub.pse	"2,508,549,325,107,960"	LMG 11571
Butyrivibrio sp. AE3006	1280673	PRJNA185696	185696	Terrabacteria group	Firmicutes	4.14777	41.5	-	AUJJ01	41	3595	3461	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440668	GCA_000424165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/165/GCA_000424165.1_ASM42416v1	-	AE3006
Alloscardovia omnicolens	419015	PRJNA267549	267549	Terrabacteria group	Actinobacteria	1.875	46.9	-	JVKN01	21	1624	1507	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197541	GCA_001056455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/455/GCA_001056455.1_ASM105645v1	26230489	350_GVAG
Streptomyces rimosus subsp. rimosus	132474	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.52013	71.9	-	JOBP01	138	8292	7867	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645396	GCA_000718675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/675/GCA_000718675.1_ASM71867v1	-	NRRL WC-3930
Curtobacterium sp. Leaf261	1736311	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.92643	70.5	-	LMMJ01	14	3555	3453	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151701	GCA_001422205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/205/GCA_001422205.1_Leaf261	26633631	Leaf261
Rhodococcus qingshengii	334542	PRJNA246036	246036	Terrabacteria group	Actinobacteria	7.43081	61.7	-	JNCU01	349	6903	5415	6/5/14	4/15/15	Contig	Pennsylvania State University	SAMN02742160	GCA_000698455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/455/GCA_000698455.1_ASM69845v1	25858843	TUHH-12
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.65938	58.9	-	LNWC01	75	4414	4291	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339839	GCA_001681265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/265/GCA_001681265.1_ASM168126v1	-	F2459
Pseudomonas lundensis	86185	PRJNA397499	397499	Proteobacteria	Gammaproteobacteria	5.03579	58.7	-	NQKE01	98	4664	4451	8/24/17	8/27/17	Scaffold	CSIRO Agriculture and Food	SAMN07459818	GCA_002268995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/995/GCA_002268995.1_ASM226899v1	-	L1819
Brochothrix thermosphacta	2756	PRJNA338887	338887	Terrabacteria group	Firmicutes	2.47199	36.4	-	MDLP01	22	2356	2264	8/29/16	4/5/17	Contig	CSIRO Agriculture and Food; Food Safety and Stability Group	SAMN05567455	GCA_001715725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/725/GCA_001715725.1_ASM171572v1	-	Bth-7810
Leucobacter sp. 7(1)	1255613	PRJEB19171	374438	Terrabacteria group	Actinobacteria	3.92333	65.8	-	FUID01	106	3559	3437	2/11/17	5/31/17	Contig	MICALIS	SAMEA80404168	GCA_900163635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/635/GCA_900163635.1_ASM90016363v1	-	7(1)
Vibrio cholerae	666	PRJNA301765	301765	Proteobacteria	Gammaproteobacteria	4.17025	47.5149	chromosome 1:NZ_CP013317.1/CP013317.1; chromosome 2:NZ_CP013318.1/CP013318.1	-	2	4030	3834	11/30/16	3/28/17	Complete Genome	Nankai University	SAMN04256437	GCA_001887515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/515/GCA_001887515.1_ASM188751v1	27849586	NCTC5395
Serratia liquefaciens	614	PRJNA354878	354878	Proteobacteria	Gammaproteobacteria	5.32635	55.5	-	MQRG01	35	4990	4610	12/19/16	12/19/16	Contig	Institute of Experimental Medicine	SAMN06053761	GCA_001908115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/115/GCA_001908115.1_ASM190811v1	-	72
Mycoplasma sp. CAG:472	1262904	PRJEB896	206895	Terrabacteria group	Tenericutes	1.25042	25.3	-	CBIV01	48	1314	1281	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138750	GCA_000437315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/315/GCA_000437315.1_MGS472	-	-
Acinetobacter indicus	756892	PRJNA385491	385491	Proteobacteria	Gammaproteobacteria	3.01288	45.6	-	NEXW01	33	2927	2714	6/6/17	6/8/17	Contig	National Institute of Public Health	SAMN06891202	GCA_002174105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/105/GCA_002174105.1_ASM217410v1	-	KCTC 42012
Acinetobacter soli	487316	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.43948	42.7	-	LLEZ01	127	3360	3093	10/27/15	4/6/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145665	GCA_001414585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/585/GCA_001414585.1_ASM141458v1	-	ABBL054
Streptococcus oralis subsp. tigurinus	1077464	PRJNA302885	302885	Terrabacteria group	Firmicutes	2.12677	40.9	-	LNVF01	30	2173	2028	4/14/17	4/21/17	Contig	Genomic Research Laboratory (GRL)	SAMN04283921	GCA_002093545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/545/GCA_002093545.1_ASM209354v1	27505001	AZ_8
Mycobacterium asiaticum	1790	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.43226	65.5	-	LZLQ01	154	5052	4796	6/17/16	4/5/17	Contig	JCVI	SAMN04634169	GCA_001673315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/315/GCA_001673315.1_ASM167331v1	-	1245139.5
Cellulosimicrobium cellulans	1710	PRJEB15849	347800	Terrabacteria group	Actinobacteria	4.47796	74.5	-	FNBV01	20	4021	3892	10/20/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487781	GCA_900102445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/445/GCA_900102445.1_IMG-taxon_2623620579_annotated_assembly	-	DSM 43879
Porphyromonas gulae	111105	PRJNA253702	253702	FCB group	Bacteroidetes/Chlorobi group	2.44228	48.4	-	JRAJ01	26	2201	2033	10/27/14	4/2/17	Contig	UC Davis	SAMN03002870	GCA_000768765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/765/GCA_000768765.1_ASM76876v1	25858832	COT-052 OH2179
Citrobacter amalonaticus	35703	PRJNA254477	254477	Proteobacteria	Gammaproteobacteria	5.00502	52.2	-	LAMY01	137	4977	4671	4/13/15	4/3/17	Contig	Canadian Food Inspection Agency	SAMN03437259	GCA_000972645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/645/GCA_000972645.1_ASM97264v1	-	GTA-817-RBA-P2
Blastomonas sp. CCH6-A6	1768735	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	4.10791	64.3	-	LSHJ01	143	3979	3817	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299406	GCA_001555715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/715/GCA_001555715.1_ASM155571v1	-	CCH6-A6
Porphyrobacter sp. AAP82	1248917	PRJNA178652	178652	Proteobacteria	Alphaproteobacteria	2.89907	67.3	-	ANFX01	52	2795	2689	1/9/13	4/8/17	Scaffold	"Institute of Microbiology, ASCR"	SAMN02470019	GCA_000331285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/285/GCA_000331285.1_PorAAP82ver1.0	-	AAP82
Vibrio jasicida CAIM 1864 = LMG 25398	1229494	PRJDB727	203004	Proteobacteria	Gammaproteobacteria	6.0523	45	-	BAOG01	278	5552	5328	5/14/13	4/8/17	Contig	University of Miyazaki	SAMD00036660	GCA_000400365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/365/GCA_000400365.1_ASM40036v1	23710045	CAIM 1864 = LMG 25398
Haloferax sp. SB29	1544718	PRJNA305176	305176	Euryarchaeota	Halobacteria	3.83076	60.9	-	LOPV01	716	3857	3477	12/18/15	4/11/17	Contig	"Red Sea Research Center, Saudi Arabia"	SAMN04318427	GCA_001469865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/865/GCA_001469865.1_ASM146986v1	-	SB29
Pseudomonas protegens	380021	PRJNA290438	290438	Proteobacteria	Gammaproteobacteria	6.85402	63.4	-	LHUV01	15	6233	6115	8/18/15	4/4/17	Contig	JLU	SAMN03891657	GCA_001269475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/475/GCA_001269475.1_ASM126947v1	-	PGNR1
Leptospira alstonii	28452	PRJNA257125	257125	Spirochaetes	Spirochaetia	4.43758	42.5	-	JQRT01	216	4225	3941	2/24/16	4/11/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947768	GCA_001569445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/445/GCA_001569445.1_ASM156944v1	26833181	56668
Bacillus stratosphericus	293386	PRJNA285381	285381	Terrabacteria group	Firmicutes	3.69692	41.3	-	LDUH01	65	3852	3716	6/30/15	4/3/17	Contig	University of Malaya	SAMN03744439	GCA_001043535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/535/GCA_001043535.1_ASM104353v1	-	LK5
Massilia sp. Root133	1736455	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	7.14518	66.1	-	LMEW01	36	6232	6039	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155724	GCA_001426525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/525/GCA_001426525.1_Root133	26633631	Root133
Chitinophaga sp. JGI 0001002-D04	1235985	PRJNA176042	176042	FCB group	Bacteroidetes/Chlorobi group	1.82996	47.7	-	AUNO01	290	-	-	7/16/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441138	GCA_000463735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/735/GCA_000463735.1_ASM46373v1	-	JGI 0001002-D04
Rhizobacter sp. OV335	1500264	PRJEB18406	355841	Proteobacteria	Betaproteobacteria	6.90181	68.7	-	FRCQ01	72	6234	6013	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02787076	GCA_900142965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/965/GCA_900142965.1_IMG-taxon_2588253510_annotated_assembly	-	OV335
Pelomonas sp. KK5	1855730	PRJNA214105	214105	Proteobacteria	Betaproteobacteria	6.8755	69	-	LYVQ01	619	6366	5896	2/3/17	4/17/17	Contig	Georgia Institute of Technology	SAMN05162226	GCA_001984095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/095/GCA_001984095.1_ASM198409v1	-	KK5
Mucilaginibacter sp. OK283	1881049	PRJEB16941	351087	FCB group	Bacteroidetes/Chlorobi group	7.1853	43.1	-	FODR01	36	5950	5847	10/29/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428947	GCA_900110415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/415/GCA_900110415.1_IMG-taxon_2684623006_annotated_assembly	-	OK283
Anoxybacillus sp. BCO1	1548750	PRJNA261743	261743	Terrabacteria group	Firmicutes	2.8087	41.7	-	JRLC01	102	3083	1433	11/26/14	4/9/17	Contig	Microbial Gene Research and Resources Facility	SAMN03075636	GCA_000787435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/435/GCA_000787435.1_Anoxy_BCO1	25676761	BCO1
Gordonia sp. NB4-1Y	1241906	PRJNA177342	177342	Terrabacteria group	Actinobacteria	5.62605	68	-	APHK02	153	4999	4448	3/18/13	4/11/17	Contig	Thompson Rivers University	SAMN01942134	GCA_000347295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/295/GCA_000347295.2_ASM34729v2	23744905	NB4-1Y
Leptotrichia sp. oral taxon 225 str. F0581	1321774	PRJNA198878	198878	Fusobacteria	Fusobacteriia	2.40008	29.6	-	AWVS01	174	2251	2149	9/19/13	4/17/17	Scaffold	Washington University	SAMN02436812	GCA_000469525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/525/GCA_000469525.1_ASM46952v1	-	F0581
Blautia sp. An81	1965659	PRJNA377666	377666	Terrabacteria group	Firmicutes	4.31642	44.5	-	NFHH01	83	4170	3934	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473761	GCA_002161285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/285/GCA_002161285.1_ASM216128v1	-	An81
Dickeya sp. S1	1576604	PRJNA268270	268270	Proteobacteria	Gammaproteobacteria	4.89297	56.8	-	JXBO01	59	4368	4115	7/28/15	4/10/17	Contig	National Institute of Biology	SAMN03203481	GCA_001187965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/965/GCA_001187965.1_ASM118796v1	26358590	S1
Dickeya solani IPO 2222	1225786	PRJNA173396	173396	Proteobacteria	Gammaproteobacteria	4.86726	56.2	chromosome:NZ_CM001859.1/CM001859.1	AONU01	1	4305	4017	4/25/13	4/1/17	Chromosome	James Hutton Institute	SAMN02470091	GCA_000400795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/795/GCA_000400795.1_DSOIPO2222_1.0	23887905	IPO 2222
Blastococcus sp. DSM 46838	1798228	PRJEB17242	351428	Terrabacteria group	Actinobacteria	5.03678	73.6	-	FOND01	43	4808	4596	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216574	GCA_900112815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/815/GCA_900112815.1_IMG-taxon_2634166321_annotated_assembly	-	DSM 46838
Shewanella algae	38313	PRJNA328548	328548	Proteobacteria	Gammaproteobacteria	4.80336	53	-	MBFW01	64	4330	4149	11/1/16	4/13/17	Scaffold	Chonnam National University	SAMN05384438	GCA_001858195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/195/GCA_001858195.1_ASM185819v1	-	CSB04KR
Bacillus sonorensis	119858	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.75259	45.1	-	NPCS01	165	4915	4639	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372721	GCA_002271755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/755/GCA_002271755.1_assembly-7710_v1	-	7710
Pluralibacter gergoviae	61647	PRJNA285085	285085	Proteobacteria	Gammaproteobacteria	5.40783	59.1	-	LDZN01	96	5202	4893	6/23/15	4/3/17	Contig	UCSF	SAMN03737937	GCA_001038345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/345/GCA_001038345.1_ASM103834v1	-	SN86A38
Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759	1219067	PRJNA207547	207547	Proteobacteria	Gammaproteobacteria	5.13003	45	-	ATFJ01	45	4729	4513	7/2/13	4/1/17	Contig	"Center for Bio/Molecular Science & Engineering, Naval Research Laboratory"	SAMN02472057	GCA_000417905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/905/GCA_000417905.1_ASM41790v1	23929482	ATCC 14048
Chryseobacterium indologenes	253	PRJEB12508	309817	FCB group	Bacteroidetes/Chlorobi group	4.97257	37.4	-	FCNN01	381	4534	4292	1/27/16	4/11/17	Contig	URMITE	SAMEA3855907	GCA_001544435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/435/GCA_001544435.1_Chryseobacterium_indologenes	-	mars15
Elizabethkingia meningoseptica	238	PRJNA339645	339645	FCB group	Bacteroidetes/Chlorobi group	3.88673	36.4	-	MDTZ01	14	3495	3405	10/25/16	4/5/17	Contig	Michigan State University	SAMN05601445	GCA_001853405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/405/GCA_001853405.1_ASM185340v1	-	EM2
Helicobacter heilmannii ASB1.4	1216962	PRJEB367	178269	Proteobacteria	delta/epsilon subdivisions	1.8046	47.8	chromosome:HE984298.2	-	1	1983	1915	10/15/12	2/4/16	Chromosome	ansmet	SAMEA2272416	GCA_000319205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/205/GCA_000319205.1_ASM31920v1	-	type strain:ASB1.4
Pseudomonas plecoglossicida	70775	PRJNA252420	252420	Proteobacteria	Gammaproteobacteria	6.20923	62.1	-	JOJY01	22	5800	5536	10/7/14	4/9/17	Scaffold	Yeungnam University	SAMN02850755	GCA_000764405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/405/GCA_000764405.1_ASM76440v1	26184952	TND35
Pseudomonas parafulva	157782	PRJNA278266	278266	Proteobacteria	Gammaproteobacteria	4.82353	61.8	-	LDSM01	147	4360	4189	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401431	GCA_001477225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/225/GCA_001477225.1_ASM147722v1	26793183	NS212
Pseudomonas nitroreducens	46680	PRJEB21417	391659	Proteobacteria	Gammaproteobacteria	6.13314	65	-	FZOM01	16	5643	5521	7/13/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216209	GCA_900188285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/285/GCA_900188285.1_IMG-taxon_2671180175_annotated_assembly	-	LMG 21614
Pseudomonas citronellolis	53408	PRJEB17188	351299	Proteobacteria	Gammaproteobacteria	7.1985	67.5	-	FOLS01	76	6369	6181	10/31/16	4/14/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216577	GCA_900112375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/375/GCA_900112375.1_IMG-taxon_2663762793_annotated_assembly	-	LMG 18378
Pseudomonas azotoformans NBRC 12693	1215094	PRJDB202	171621	Proteobacteria	Gammaproteobacteria	6.68374	61	-	BCZW01	50	6098	5917	4/4/17	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046924	GCA_002091515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/515/GCA_002091515.1_ASM209151v1	-	NBRC 12693
Pseudomonas alcaligenes	43263	PRJEB18909	360702	Proteobacteria	Gammaproteobacteria	4.24673	65.1	-	FTNW01	10	3965	3883	1/14/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05878276	GCA_900156545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/545/GCA_900156545.1_IMG-taxon_2708743161_annotated_assembly	-	RU38D
Aeromonas sp. ANNP30	1535536	PRJNA322714	322714	Proteobacteria	Gammaproteobacteria	4.78181	58.3	-	LYSR01	105	4430	4251	9/15/16	4/13/17	Contig	Instituto de Ecologia	SAMN05172925	GCA_001729005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/005/GCA_001729005.1_ASM172900v1	-	ANNP30
Mycobacterium fortuitum	1766	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.35842	66.2	-	LZSN01	121	6195	5929	6/17/16	4/5/17	Contig	JCVI	SAMN04692001	GCA_001665455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/455/GCA_001665455.1_ASM166545v1	-	852014-51789_SCH5646012
Oscillibacter sp. CAG:241	1262911	PRJEB781	206674	Terrabacteria group	Firmicutes	1.97048	60.6	-	CBDI01	89	1858	1823	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138685	GCA_000435975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/975/GCA_000435975.1_MGS241	-	-
Limnohabitans sp. Rim11	1100719	PRJEB9573	292362	Proteobacteria	Betaproteobacteria	2.85944	52.1	-	CXOM01	7	2813	2734	8/8/15	8/1/17	Contig	Biology Centre of CAS	SAMEA3448423	GCA_001269365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/365/GCA_001269365.1_Rim11.a1	-	Rim11
Acidocella sp. 20-58-15	1970302	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.24961	57.6	-	NCAQ01	323	2350	2239	8/16/17	8/16/17	Scaffold	None	SAMN06622447	GCA_002255785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/785/GCA_002255785.1_ASM225578v1	-	-
Nocardia seriolae	37332	PRJDB4032	289861	Terrabacteria group	Actinobacteria	7.76602	68.3	-	BBYQ01	346	7278	6759	7/28/15	4/11/17	Contig	Kochi University	SAMD00034930	GCA_001192935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/935/GCA_001192935.1_ASM119293v1	26798107	U-1
Clostridium tyrobutyricum DIVETGP	1408889	PRJEB4824	231576	Terrabacteria group	Firmicutes	3.019	30.8	-	CBXI01	45	2993	2878	2/24/14	4/2/17	Contig	UNIMIDIVET	SAMEA3138940	GCA_000577845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/845/GCA_000577845.1_CTDIVETGP	25814611	DIVETGP
Halorubrum sp. AJ67	1173487	PRJEB4754	230342	Euryarchaeota	Halobacteria	4.22501	59	-	CBVY01	50	3110	2289	12/16/13	3/22/17	Scaffold	FCEN-UBA	SAMEA3138845	GCA_000513435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/435/GCA_000513435.1_HRSP_AJ67	-	AJ67
Pseudoxanthomonas sp. CF385	1881042	PRJEB16295	348891	Proteobacteria	Gammaproteobacteria	3.87545	67.9	-	FNKZ01	7	3600	3504	10/20/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428982	GCA_900104255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/255/GCA_900104255.1_IMG-taxon_2690315626_annotated_assembly	-	CF385
Thioclava sp. L04-15	1915318	PRJNA352385	352385	Proteobacteria	Alphaproteobacteria	3.85809	63.9	-	MPZW01	30	3683	3598	3/6/17	3/9/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05972084	GCA_002020275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/275/GCA_002020275.1_ASM202027v1	-	L04-15
Wohlfahrtiimonas chitiniclastica	400946	PRJNA382997	382997	Proteobacteria	Gammaproteobacteria	2.12726	43.7	-	NEFE01	8	2039	1971	8/15/17	8/17/17	Contig	Centers for Disease Control and Prevention	SAMN06758452	GCA_002252195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/195/GCA_002252195.1_ASM225219v1	-	F9188
Sinorhizobium sp. Sb3	1358417	PRJNA211975	211975	Proteobacteria	Alphaproteobacteria	7.84584	61.5	-	AUTA01	162	7481	6877	12/7/15	4/11/17	Contig	Huazhong Agricultural University	SAMN04301588	GCA_001461705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/461/705/GCA_001461705.1_ASM146170v1	-	Sb3
Pandoraea sp. PE-S2T-3	1986993	PRJNA385617	385617	Proteobacteria	Betaproteobacteria	6.17616	63.2	-	NGUQ01	37	5327	5188	6/8/17	6/10/17	Contig	Washington University in Saint Louis	SAMN06915400	GCA_002179965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/965/GCA_002179965.1_ASM217996v1	-	PE-S2T-3
Methylotenera sp. RIFCSPLOWO2_02_FULL_45_14	1801615	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	2.12505	44.6	-	MHBU01	35	2074	1949	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316071	GCA_001803395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/803/395/GCA_001803395.1_ASM180339v1	27774985	-
Rodentibacter pneumotropicus	758	PRJNA343597	343597	Proteobacteria	Gammaproteobacteria	2.49331	40.2	-	MLAD01	156	2442	2251	2/15/17	2/22/17	Contig	University of Copenhagen	SAMN05860602	GCA_001998665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/665/GCA_001998665.1_ASM199866v1	-	2002178011
Cupriavidus sp. amp6	388051	PRJNA195776	195776	Proteobacteria	Betaproteobacteria	7.57956	65.5	-	AUFE01	260	7051	6442	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441535	GCA_000426345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/345/GCA_000426345.1_ASM42634v1	-	amp6
Alicycliphilus sp. UBA3448	1946001	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	2.38326	65.8	-	DFSB01	108	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452676	GCA_002378445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/445/GCA_002378445.1_ASM237844v1	28894102	-
Candidatus Planktophila lacus	1884913	PRJNA327031	327031	Terrabacteria group	Actinobacteria	1.46006	47.5	chromosome:NZ_CP016769.1/CP016769.1	-	1	1490	1434	9/8/17	10/2/17	Complete Genome	University of Zurich	SAMN05296529	GCA_002287925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/925/GCA_002287925.1_ASM228792v1	-	-
Snodgrassella alvi	1196083	PRJNA339423	339423	Proteobacteria	Betaproteobacteria	2.42873	41.2	-	NAHE01	109	2180	2077	4/13/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603560	GCA_002088455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/455/GCA_002088455.1_ASM208845v1	-	A3
Xanthomonas translucens pv. translucens DSM 18974	1261556	PRJEB647	182302	Proteobacteria	Gammaproteobacteria	4.46358	67.7	-	CAPJ01	551	4046	3504	12/17/12	6/15/17	Contig	"CeBiTec, Bielefeld University"	SAMEA2271958	GCA_000331775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/775/GCA_000331775.1_ASM33177v1	-	DSM 18974
Leptospira sp. ZV016	1799529	PRJNA311750	311750	Spirochaetes	Spirochaetia	4.41686	36	-	LSSS01	117	4001	3637	3/9/16	4/12/17	Contig	Northern Arizona University	SAMN04488389	GCA_001584255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/255/GCA_001584255.1_ASM158425v1	27151788	ZV016
Acinetobacter venetianus	52133	PRJNA260593	260593	Proteobacteria	Gammaproteobacteria	3.53777	39.2	-	JRHX01	93	3414	3242	3/9/16	4/5/17	Contig	University of Florence	SAMN03025284	GCA_001584655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/655/GCA_001584655.1_ASM158465v1	26902269	LUH13518
Vibrio tasmaniensis 1F-155	1191323	PRJNA167047	167047	Proteobacteria	Gammaproteobacteria	5.19388	43.7	-	AJZN02	743	4712	4413	6/25/12	4/5/17	Scaffold	Broad Institute	SAMN02470479	GCA_000272385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/385/GCA_000272385.2_ASM27238v2	22955834	1F-155
Vibrio crassostreae	246167	PRJEB5883	284689	Proteobacteria	Gammaproteobacteria	5.63036	44.2	-	CCJW01	122	5059	4834	5/20/15	4/3/17	Contig	STATION BIOLOGIQUE DE ROSCOFF	SAMEA2591296	GCA_001048535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/535/GCA_001048535.1_VLGP7_PRJEB5883	-	LGP7
Rhodovulum sulfidophilum	35806	PRJNA345612	345612	Proteobacteria	Alphaproteobacteria	4.3516	66.9	-	MSYP01	9	4112	3924	1/10/17	4/6/17	Scaffold	"Department of Biology, Washington University in St. Louis"	SAMN05876041	GCA_001941695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/695/GCA_001941695.1_ASM194169v1	-	AB14
Variovorax sp. Root473	1736541	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	5.7492	67.8	-	LMEV01	20	5413	5253	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155810	GCA_001426505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/505/GCA_001426505.1_Root473	26633631	Root473
Thiomicrospira sp. XS5	1775636	PRJNA307140	307140	Proteobacteria	Gammaproteobacteria	2.63283	50.1	-	LQBO01	23	2463	2405	1/8/16	4/11/17	Contig	"Red Sea Research Center, Saudi Arabia"	SAMN04376021	GCA_001507555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/555/GCA_001507555.1_ASM150755v1	26966216	XS5
Micavibrio sp. UBA1672	1946908	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.79349	43.1	-	DCKO01	125	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454216	GCA_002320665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/665/GCA_002320665.1_ASM232066v1	28894102	-
Mesorhizobium sp. WSM2561	1040985	PRJNA209494	209494	Proteobacteria	Alphaproteobacteria	7.03754	62.2	-	AZUX01	111	6825	6276	1/3/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02597202	GCA_000513915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/915/GCA_000513915.1_ASM51391v1	-	WSM2561
Cycloclasticus sp. 46_83_sub15_T18	1856280	PRJNA320927	320927	Proteobacteria	Gammaproteobacteria	1.59157	46.4	-	MAAK01	123	1602	1565	5/31/17	5/31/17	Contig	Lawrence Berkeley National Lab	SAMN05179558	GCA_002163215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/215/GCA_002163215.1_ASM216321v1	28652349	-
Hydrogenophaga sp. PML113	1899350	PRJNA342778	342778	Proteobacteria	Betaproteobacteria	4.70036	69.9	-	MIYM01	44	4425	4320	10/18/16	4/13/17	Scaffold	Plymouth Marine Laboratory	SAMN05767953	GCA_001777155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/155/GCA_001777155.1_ASM177715v1	-	PML113
Brevibacterium sp. VCM10	1381751	PRJNA234061	234061	Terrabacteria group	Actinobacteria	3.86361	65	-	JAJB01	141	3439	3300	2/28/14	4/9/17	Contig	UNIVERSITY MALAYA	SAMN02951899	GCA_000583215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/215/GCA_000583215.1_V6.0.2	-	VCM10
Cellulomonas sp. KRMCY2	1304865	PRJNA195883	195883	Terrabacteria group	Actinobacteria	4.49523	71.7	-	JAGF01	1	4132	3990	1/14/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02584942	GCA_000526515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/515/GCA_000526515.1_ASM52651v1	-	KRMCY2
Chryseobacterium sp. CF365	1500282	PRJNA247524	247524	FCB group	Bacteroidetes/Chlorobi group	5.29688	35.9	-	JQJM01	56	4747	4612	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02787106	GCA_000745535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/535/GCA_000745535.1_ASM74553v1	-	CF365
Akkermansia sp. UNK.MGS-1	1638783	PRJNA277012	277012	PVC group	Verrucomicrobia	2.77081	55	-	LBCB01	40	-	-	4/24/15	6/10/15	Scaffold	The Mayo Clinic	SAMN03456685	GCA_000980515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/515/GCA_000980515.1_ASM98051v1	26021920	-
Dehalobacter sp. TeCB1	1843715	PRJNA320344	320344	Terrabacteria group	Firmicutes	3.13322	44	-	MCHF01	67	3106	2961	8/18/16	4/13/17	Scaffold	UNIVERSITY OF NEW SOUTH WALES	SAMN04932652	GCA_001707455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/455/GCA_001707455.1_ASM170745v1	-	TeCB1
Atopobium sp. BS2	936550	PRJNA165893	165893	Terrabacteria group	Actinobacteria	1.60454	48.5	-	JDFG01	49	1428	1338	2/6/14	4/17/17	Contig	JCVI	SAMN02344604	GCA_000565075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/075/GCA_000565075.1_AspBS2v1.0	-	BS2
Sulfurimonas sp. RIFCSPLOWO2_12_FULL_36_74	1802255	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.86583	36.3	-	MICB01	444	2106	1722	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316202	GCA_001829705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/705/GCA_001829705.1_ASM182970v1	27774985	-
Yersinia sp. FDAARGOS_228	1839800	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.96287	47.5	chromosome:NZ_CP020409.1/CP020409.1	-	1	4591	4221	3/29/17	4/1/17	Complete Genome	US Food and Drug Administration 	SAMN04875565	GCA_002073315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/315/GCA_002073315.1_ASM207331v1	-	FDAARGOS_228
Xanthomonas sp. MUS 060	1588031	PRJNA270312	270312	Proteobacteria	Gammaproteobacteria	3.85735	62.9	-	JZIM01	126	3505	3088	3/25/15	4/10/17	Contig	CIRAD	SAMN03265457	GCA_000963215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/215/GCA_000963215.1_Xal-MUS060-G1	26213974	MUS 060
Aeromicrobium sp. Leaf289	1736324	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.46215	71.8	-	LMNK01	8	3353	3280	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151714	GCA_001423335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/335/GCA_001423335.1_Leaf289	26633631	Leaf289
Acidiphilium sp. 21-60-14	1970292	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	3.05739	60.2	-	NCBH01	132	2936	2828	8/16/17	8/16/17	Contig	None	SAMN06622429	GCA_002255745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/745/GCA_002255745.1_ASM225574v1	-	-
Hyphomicrobium sp. CS1GBMeth3	1892845	PRJEB17663	353789	Proteobacteria	Alphaproteobacteria	4.02937	63.6	-	FPHO01	3	3831	3740	11/16/16	4/16/17	Contig	Griffith University	SAMEA4534595	GCA_900117455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/455/GCA_900117455.1_CS1GBMeth3	-	-
Idiomarina sp. H105	1766622	PRJNA305181	305181	Proteobacteria	Gammaproteobacteria	6.15203	52.8	-	LOPZ01	225	5881	5667	12/18/15	12/18/15	Contig	"Red Sea Research Center, Saudi Arabia"	SAMN04318432	GCA_001469885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/885/GCA_001469885.1_ASM146988v1	-	H105
Halomonas sp. N3-2A	2014541	PRJNA391029	391029	Proteobacteria	Gammaproteobacteria	4.72383	52.9	chromosome:NZ_CP022286.1/CP022286.1	-	1	4383	4181	7/10/17	7/12/17	Chromosome	Memorial University of Newfoundland	SAMN07256639	GCA_002216165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/165/GCA_002216165.1_ASM221616v1	-	N3-2A
Francisella sp. W12-1067	1385420	PRJNA214898	214898	Proteobacteria	Gammaproteobacteria	1.70234	32.1	-	AWHF01	57	1556	1479	6/23/14	4/9/17	Contig	Robert Koch-Institut	SAMN02315612	GCA_000710735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/735/GCA_000710735.1_GEN130326_H	24961323	W12-1067
Nitrospina sp. LS_NOB	1671875	PRJNA287175	287175	Nitrospinae/Tectomicrobia group	Nitrospinae	2.64775	46.9	-	LFLA01	26	-	-	2/1/16	2/1/16	Contig	Hong Kong University of Science and Technology	SAMN03777284	GCA_001542995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/995/GCA_001542995.1_ASM154299v1	26637128	-
Nitrosopumilus sp. BACL13 MAG-121220-bin23	1655561	PRJNA273799	273799	TACK group	Thaumarchaeota	1.27039	31	-	LIAL01	183	1602	1471	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741946	GCA_001437625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/625/GCA_001437625.1_ASM143762v1	-	-
Rheinheimera sp. UBA4099	1947374	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.39399	49.4	-	DFXV01	344	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06456323	GCA_002381885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/885/GCA_002381885.1_ASM238188v1	28894102	-
Dehalococcoides mccartyi	61435	PRJNA376155	376155	Terrabacteria group	Chloroflexi	1.39432	47.5	chromosome:NZ_CP019868.1/CP019868.1	-	1	1523	1443	2/28/17	3/2/17	Complete Genome	University of Toronto	SAMN06350859	GCA_002007865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/865/GCA_002007865.1_ASM200786v1	-	KBDCA2
Megasphaera sp. BV3C16-1	1111454	PRJNA89631	89631	Terrabacteria group	Firmicutes	2.21443	49.8	-	AWXA01	62	2174	2028	10/23/13	4/9/17	Contig	JCVI	SAMN02436562	GCA_000478965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/965/GCA_000478965.1_MspBV3C16-1v1.0	-	BV3C16-1
Citromicrobium sp. JL2201	1629595	PRJNA277902	277902	Proteobacteria	Alphaproteobacteria	3.27365	65.1	-	LARQ01	22	3260	3177	10/2/15	4/11/17	Contig	Xiamen University	SAMN03398463	GCA_001306305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/305/GCA_001306305.1_ASM130630v1	-	JL2201
Desulfosporosinus sp. FKB	1969835	PRJNA379504	379504	Terrabacteria group	Firmicutes	5.12157	41.8	-	NADJ01	40	4953	4694	6/16/17	6/21/17	Contig	Sun Yat-sen University	SAMN06610402	GCA_002196705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/705/GCA_002196705.1_ASM219670v1	-	FKB
Sphingobacterium sp. HMSC13C05	1581095	PRJNA269864	269864	FCB group	Bacteroidetes/Chlorobi group	5.83683	39.9	-	LUAH01	64	5043	4852	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03433342	GCA_001808025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/025/GCA_001808025.1_ASM180802v1	-	HMSC13C05
Rothia sp. HMSC064D08	1715104	PRJNA296232	296232	Terrabacteria group	Actinobacteria	2.45966	53.9	-	LTJO01	17	2146	2049	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477514	GCA_001809525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/525/GCA_001809525.1_ASM180952v1	-	HMSC064D08
Rhodanobacter sp. Soil772	1736406	PRJNA298127	298127	Proteobacteria	Gammaproteobacteria	3.57151	66.7	-	LMSK01	5	3197	3108	11/2/15	4/11/17	Scaffold	ETH Zurich	SAMN04155671	GCA_001428385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/385/GCA_001428385.1_Soil772	26633631	Soil772
Thiomonas sp. CB3	554132	PRJEB8795	321287	Proteobacteria	Betaproteobacteria	25.1426	52.4	-	CTRM01	46	4570	4498	5/11/16	5/11/16	Scaffold	Genoscope CEA	SAMEA3305045	GCA_900004415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/004/415/GCA_900004415.1_BBA-B_PRJEB8795_v1	-	CB3
Selenomonas sp. F0473	999423	PRJNA64897	64897	Terrabacteria group	Firmicutes	2.06754	58.4	-	AGZT01	2	1946	1859	11/27/12	4/17/17	Scaffold	Broad Institute	SAMN02463944	GCA_000315545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/545/GCA_000315545.1_Seleno_sp_F0473_V1	-	F0473
Aerococcus sp. HMSC075D05	1739288	PRJNA299938	299938	Terrabacteria group	Firmicutes	1.89349	42.4	-	LTGP01	63	1724	1647	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477609	GCA_001811135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/135/GCA_001811135.1_ASM181113v1	-	HMSC075D05
Methanosarcina sp. 2.H.A.1B.4	1483600	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	3.90715	42.9	-	JJOV01	94	3340	3141	4/23/15	4/10/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708992	GCA_000979385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/385/GCA_000979385.1_gtlEnvA5udCFS	25756680	2.H.A.1B.4
Haemophilus sp. HMSC073C03	1739452	PRJNA300102	300102	Proteobacteria	Gammaproteobacteria	2.00773	39.3	-	LTVN01	39	1993	1874	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480373	GCA_001814055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/055/GCA_001814055.1_ASM181405v1	-	HMSC073C03
Oblitimonas alkaliphila	1697053	PRJNA291610	291610	Proteobacteria	Gammaproteobacteria	2.27214	47.5	chromosome:NZ_CP012359.1/CP012359.1	-	1	2193	2103	8/13/15	4/4/17	Complete Genome	CDC	SAMN03946314	GCA_001267195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/195/GCA_001267195.1_ASM126719v1	26679585	C6819
Afipia sp. OHSU_I-uncloned	1297862	PRJNA191808	191808	Proteobacteria	Alphaproteobacteria	5.0837	61.1	-	APJG01	47	4921	4782	11/20/13	4/9/17	Contig	FDA	SAMN02952943	GCA_000497615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/615/GCA_000497615.1_OHSU_J_uncloned	24155888	OHSU_I-uncloned
Alteromonas sp. W12	1772289	PRJNA306252	306252	Proteobacteria	Gammaproteobacteria	4.60422	44.7	-	LQXH01	14	3986	3878	12/29/16	4/16/17	Contig	Duke University Marine Lab	SAMN04348724	GCA_001924945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/924/945/GCA_001924945.1_ASM192494v1	-	W12
Loktanella sp. DSM 29012	1881056	PRJEB16974	351128	Proteobacteria	Alphaproteobacteria	3.41748	61.8	-	FOEJ01	21	3333	3246	10/29/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428995	GCA_900110705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/705/GCA_900110705.1_IMG-taxon_2675903145_annotated_assembly	-	DSM 29012
Sulfurospirillum sp. MES	1565314	PRJNA245339	245339	Proteobacteria	delta/epsilon subdivisions	2.6526	43.8	-	JSEC01	61	2679	2485	12/4/14	1/28/15	Contig	Argonne National Laboratory	SAMN03140276	GCA_000789415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/415/GCA_000789415.1_ASM78941v1	25593246	-
Thalassospira sp. KO164	1798192	PRJNA321222	321222	Proteobacteria	Alphaproteobacteria	4.81489	54.8	-	MAJC01	2	4519	4395	7/22/16	4/13/17	Contig	Oak Ridge National Lab	SAMN04978194	GCA_001692855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/855/GCA_001692855.1_Thalassospira_sp_KO164_v1.1	-	KO164
Collinsella sp. An2	1965585	PRJNA377666	377666	Terrabacteria group	Actinobacteria	2.53674	62.4	-	NFJW01	46	2149	2073	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473661	GCA_002160065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/065/GCA_002160065.1_ASM216006v1	-	An2
Delftia sp. GW456-R20	1827145	PRJNA316744	316744	Proteobacteria	Betaproteobacteria	6.65991	66.6	-	LWCN01	5	5947	5774	4/18/16	4/12/17	Contig	Lawrence Berkeley National Laboratory	SAMN04589916	GCA_001622915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/915/GCA_001622915.1_ASM162291v1	-	GW456-R20
Coprococcus sp. 43_8	1896996	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.48788	42.6	-	MNSD01	197	1536	1031	12/23/16	12/23/16	Scaffold	None	SAMN05717261	GCA_001916295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/295/GCA_001916295.1_ASM191629v1	27819664	-
Capnocytophaga sp. oral taxon 329 str. F0087	706436	PRJNA43127	43127	FCB group	Bacteroidetes/Chlorobi group	2.53678	40.3	-	AFHP02	141	2343	2070	5/11/11	4/17/17	Scaffold	Washington University Genome Center	SAMN00189097	GCA_000213295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/295/GCA_000213295.2_ASM21329v2	-	F0087
Veillonella sp. ACP1	936588	PRJNA78581	78581	Terrabacteria group	Firmicutes	2.04259	38.8	-	ALKL01	26	1916	1824	8/10/12	4/17/17	Contig	J. Craig Venter Institute	SAMN00828793	GCA_000286635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/635/GCA_000286635.1_VspACP1v1.0	-	ACP1
Peptoniphilus sp. oral taxon 836 str. F0141	768724	PRJNA49437	49437	Terrabacteria group	Firmicutes	1.62516	30.3	-	AEAA01	145	1579	1408	7/14/10	4/17/17	Contig	J. Craig Venter Institute	SAMN00031762	GCA_000179335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/335/GCA_000179335.1_ASM17933v1	-	F0141
Bartonella sp. CDC_skunk	1933905	PRJNA360985	360985	Proteobacteria	Alphaproteobacteria	1.61532	36.1	chromosome:NZ_CP019782.1/CP019782.1	-	1	1416	1282	3/7/17	3/10/17	Chromosome	University of Basel	SAMN06213867	GCA_002022545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/545/GCA_002022545.1_ASM202254v1	-	CDC_skunk
Labrenzia sp. OB1	1561204	PRJNA263857	263857	Proteobacteria	Alphaproteobacteria	6.00235	59.4	-	JSEP01	100	5571	5309	4/20/16	4/12/17	Contig	Scripps Institution of Oceanography	SAMN03107784	GCA_001624695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/624/695/GCA_001624695.1_ASM162469v1	-	OB1
Tannerella sp. oral taxon BU063 isolate Cell 5	1410950	PRJNA222524	222524	FCB group	Bacteroidetes/Chlorobi group	3.21491	55.8	-	AYYC01	742	2794	2724	12/18/13	12/18/13	Contig	The Ohio State University	SAMN02419806	GCA_000510505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/510/505/GCA_000510505.1_BU063sc5	-	-
Eggerthella sp. CAG:298	1262876	PRJEB816	206823	Terrabacteria group	Actinobacteria	1.78846	54	-	CBHI01	31	1626	1581	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138670	GCA_000435675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/675/GCA_000435675.1_MGS298	-	-
Porphyromonas sp. COT-052 OH4946	1515618	PRJNA253620	253620	FCB group	Bacteroidetes/Chlorobi group	2.38488	48.5	-	JQZY01	34	2119	1952	10/10/14	4/9/17	Contig	UC Davis	SAMN03004273	GCA_000765965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/965/GCA_000765965.1_ASM76596v1	25858832	COT-052 OH4946
Neisseria sp. oral taxon 020 str. F0370	1127694	PRJNA80247	80247	Proteobacteria	Betaproteobacteria	2.3589	58.6	-	AMER01	118	2326	2181	12/10/12	4/16/17	Scaffold	Washington University	SAMN02436686	GCA_000318235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/235/GCA_000318235.2_ASM31823v2	-	F0370
Campylobacter sp. 10_1_50	665939	PRJNA40015	40015	Proteobacteria	delta/epsilon subdivisions	1.89563	39.6	-	ACWJ01	13	1937	1796	12/16/11	4/17/17	Scaffold	Broad Institute	SAMN02463793	GCA_000238755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/755/GCA_000238755.1_Campylobacter_sp_10_1_50_V1	-	10_1_50
Alistipes sp. An54	1965645	PRJNA377666	377666	FCB group	Bacteroidetes/Chlorobi group	3.26831	58.4	-	NFIA01	35	2749	2614	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473737	GCA_002159375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/375/GCA_002159375.1_ASM215937v1	-	An54
Olsenella sp. HMSC062G07	1739330	PRJNA299980	299980	Terrabacteria group	Actinobacteria	2.01695	65.5	-	LTFF01	30	1800	1693	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477638	GCA_001811895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/895/GCA_001811895.1_ASM181189v1	-	HMSC062G07
Propionibacterium sp. KPL2005	1203633	PRJNA170373	170373	Terrabacteria group	Actinobacteria	2.56925	63.3	-	AXMF01	6	2388	2234	10/21/13	4/17/17	Scaffold	Broad Institute	SAMN02597012	GCA_000477675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/675/GCA_000477675.1_Prop_sp_KPL2005_V1	-	KPL2005
Ralstonia sp. AU12-08	1235457	PRJNA174751	174751	Proteobacteria	Betaproteobacteria	6.22915	63.5	-	ASZV01	78	5859	5652	7/31/13	4/8/17	Contig	Griffith University	SAMN02469851	GCA_000442475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/475/GCA_000442475.1_ASM44247v1	24503988	AU12-08
Dorea sp. 42_8	1896999	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.98244	42	-	MNSG01	226	2061	1409	12/23/16	12/23/16	Scaffold	None	SAMN05717264	GCA_001916345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/345/GCA_001916345.1_ASM191634v1	27819664	-
Oblitimonas alkaliphila	1697053	PRJNA291610	291610	Proteobacteria	Gammaproteobacteria	2.31203	47.5	chromosome:NZ_CP012360.1/CP012360.1	-	1	2222	2120	8/13/15	4/4/17	Complete Genome	CDC	SAMN03946326	GCA_001267215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/215/GCA_001267215.1_ASM126721v1	26679585	C6918
Parabacteroides sp. D25	658661	PRJNA39405	39405	FCB group	Bacteroidetes/Chlorobi group	5.16057	45.1	-	ACUA01	24	4433	4238	10/19/12	6/12/17	Scaffold	Broad Institute	SAMN02595347	GCA_000307475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/475/GCA_000307475.1_Paraba_sp_D25_V1	-	D25
Rhodobacter sp. 24-YEA-8	1884310	PRJEB16431	349344	Proteobacteria	Alphaproteobacteria	5.01174	62.7	-	FNSK01	7	4765	4547	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05519105	GCA_900105075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/075/GCA_900105075.1_IMG-taxon_2693429821_annotated_assembly	-	24-YEA-8
Micromonospora sp. RV43	1661387	PRJNA284660	284660	Terrabacteria group	Actinobacteria	8.06923	72.5	-	LEKG01	376	7480	6987	6/18/15	4/10/17	Scaffold	University of Wuerzburg	SAMN03729478	GCA_001029515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/515/GCA_001029515.1_ASM102951v1	26430030	RV43
Actinomyces sp. oral taxon 180 str. F0310	888052	PRJNA53011	53011	Terrabacteria group	Actinobacteria	2.37266	66.1	-	AEPP01	6	2049	1946	12/21/10	4/17/17	Scaffold	Baylor College of Medicine	SAMN00260256	GCA_000185285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/285/GCA_000185285.1_ASM18528v1	-	F0310
Desulfovibrio sp. A2	298701	PRJNA61255	61255	Proteobacteria	delta/epsilon subdivisions	4.15069	67.2	-	AGFG01	84	3463	3324	9/21/11	5/18/17	Contig	Asbach	SAMN02471586	GCA_000226255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/255/GCA_000226255.2_ASM22625v1	22072648	A2
Azospirillum sp. CAG:260	1262706	PRJEB794	206724	Proteobacteria	Alphaproteobacteria	1.81059	47	-	CBDP01	83	1812	1762	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138695	GCA_000436195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/195/GCA_000436195.1_MGS260	-	-
Fusobacterium sp. HMSC064B11	1739543	PRJNA300194	300194	Fusobacteria	Fusobacteriia	2.40163	26.8	-	LTSL01	119	2357	2177	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480459	GCA_001815715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/715/GCA_001815715.1_ASM181571v1	-	HMSC064B11
Prochlorococcus sp. MIT 0601	1499498	PRJNA246696	246696	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.70734	37	-	JNAU01	6	1842	1778	9/29/14	4/9/17	Contig	MIT	SAMN02769566	GCA_000760175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/175/GCA_000760175.1_ASM76017v1	25977791	MIT 0601
Shigella sp. FC2045	1886516	PRJNA338025	338025	Proteobacteria	Gammaproteobacteria	5.41532	50.6	-	MDES01	382	5842	5048	8/24/16	8/8/17	Contig	Christian Medical College	SAMN05520397	GCA_001712535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/535/GCA_001712535.1_ASM171253v1	-	FC2045
Coprobacillus sp. D6	556262	PRJNA32461	32461	Terrabacteria group	Firmicutes	3.86129	31.3	-	AKCB01	9	3906	3764	6/15/12	4/17/17	Contig	Broad Institute	SAMN02463702	GCA_000269565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/565/GCA_000269565.1_PB_Copr_sp_D6_V1	22829535	D6
Colwellia sp. MT2012	1718921	PRJNA295895	295895	Proteobacteria	Gammaproteobacteria	4.3555	39.3	-	LJVG01	163	3773	3549	11/5/15	4/11/17	Contig	University of California San Diego	SAMN04092639	GCA_001432325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/325/GCA_001432325.1_ASM143232v1	-	MT2012
Thauera sp. SWB20	1572758	PRJNA267225	267225	Proteobacteria	Betaproteobacteria	4.9274	67.9	-	JTDM01	21	4450	4258	2/2/15	4/10/17	Contig	Los Alamos National Laboratory	SAMN03195666	GCA_000831325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/325/GCA_000831325.1_SWB_20a	-	SWB20
Exiguobacterium sp. Leaf187	1736294	PRJNA297956	297956	Terrabacteria group	Firmicutes	3.30956	46.7	-	LMPR01	16	3406	3347	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151674	GCA_001423925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/925/GCA_001423925.1_Leaf187	26633631	Leaf187
Bacteroides sp. 3_2_5	457392	PRJNA32441	32441	FCB group	Bacteroidetes/Chlorobi group	5.11628	43.2	-	ACIB02	5	4504	4275	4/2/09	5/18/17	Scaffold	Broad Institute	SAMN02463693	GCA_000159855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/855/GCA_000159855.2_Bact_sp_3_2_5_V2	-	3_2_5
Thioalkalivibrio sp. ARh3	1158148	PRJNA176568	176568	Proteobacteria	Gammaproteobacteria	2.7882	66.2	-	ARHZ01	15	2731	2626	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441013	GCA_000377265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/265/GCA_000377265.1_ASM37726v1	-	ARh3
Ruminococcus sp. NK3A76	877411	PRJNA239510	239510	Terrabacteria group	Firmicutes	3.56112	46.9	-	JMMA01	2	3211	3095	5/8/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02743361	GCA_000686125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/125/GCA_000686125.1_ASM68612v1	-	NK3A76
Yersinia intermedia	631	PRJNA240097	240097	Proteobacteria	Gammaproteobacteria	4.85975	47.5	chromosome:NZ_CP009801.1/CP009801.1	-	1	4502	4244	2/9/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03160554	GCA_000834515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/515/GCA_000834515.1_ASM83451v1	25931590	Y228
Thermotoga sp. Xyl54	1235863	PRJNA176019	176019	Thermotogae	Thermotogae	1.73777	46.4	-	JSFJ01	17	1812	1695	11/17/14	4/9/17	Contig	University of Alberta	SAMN03143095	GCA_000784785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/785/GCA_000784785.1_ASM78478v1	25500512	Xyl54
Candidatus Pelagibacter sp. UBA2154	1946225	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	1.07676	28.6	-	DCWU01	126	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455852	GCA_002327625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/625/GCA_002327625.1_ASM232762v1	28894102	-
Rhodoferax sp. UBA4127	1947377	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	3.62704	57.2	-	DFWT01	302	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453213	GCA_002381045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/045/GCA_002381045.1_ASM238104v1	28894102	-
Stenotrophomonas sp. HMSC10F06	1581081	PRJNA269850	269850	Proteobacteria	Gammaproteobacteria	4.11491	66.8	-	LWNH01	63	3667	3523	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03287020	GCA_001807865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/865/GCA_001807865.1_ASM180786v1	-	HMSC10F06
Pseudovibrio sp. Ad5	989436	PRJNA298121	298121	Proteobacteria	Alphaproteobacteria	6.06101	51.3	-	LMCH01	66	5506	5347	4/19/16	4/17/17	Contig	University College Cork	SAMN04147122	GCA_001623095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/095/GCA_001623095.1_ASM162309v1	27065959	Ad5
Pedobacter sp. Hv1	1740090	PRJNA299189	299189	FCB group	Bacteroidetes/Chlorobi group	4.89527	37.2	-	LLWP01	23	4369	4283	10/23/15	4/11/17	Contig	West Virginia University	SAMN04195057	GCA_001412215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/215/GCA_001412215.1_ASM141221v1	26679583	Hv1
Carnobacterium sp. 1290_CSPC	1579347	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.04768	39.3	-	JVVG01	124	1876	1807	7/10/15	4/10/17	Contig	University of Washington	SAMN03197262	GCA_001053265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/265/GCA_001053265.1_ASM105326v1	26230489	1290_CSPC
Limnobacter sp. UBA3528	1946760	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	3.23984	52.2	-	DFOZ01	57	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457872	GCA_002377005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/005/GCA_002377005.1_ASM237700v1	28894102	-
Brevundimonas sp. Root1423	1736462	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	5.7315	68.4	-	LMFL01	95	5910	5328	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155731	GCA_001426805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/805/GCA_001426805.1_Root1423	26633631	Root1423
Yersinia ruckeri	29486	PRJNA237812	237812	Proteobacteria	Gammaproteobacteria	3.60522	47.5	chromosome:NZ_CP009539.1/CP009539.1	-	1	3284	3085	2/9/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03010447	GCA_000834255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/255/GCA_000834255.1_ASM83425v1	25931590	YRB
Alcanivorax sp. PN-3	1397526	PRJNA217943	217943	Proteobacteria	Gammaproteobacteria	4.69733	61.5	-	AXBX01	104	4318	4197	10/21/13	4/9/17	Contig	University of Illinois at Chicago	SAMN02345633	GCA_000475175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/175/GCA_000475175.1_De_Novo_assembly	24356826	PN-3
Eubacterium sp. ER2	1519438	PRJNA253252	253252	Terrabacteria group	Firmicutes	3.26743	52.9	-	JPJE01	75	3181	3037	10/9/14	4/9/17	Contig	Technical University of Denmark	SAMN02903322	GCA_000765215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/215/GCA_000765215.1_ASM76521v1	25163406	ER2
Brevibacillus sp. OK042	1884381	PRJEB17395	351576	Terrabacteria group	Firmicutes	5.8007	50	-	FORT01	43	5775	5464	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05518846	GCA_900114075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/075/GCA_900114075.1_IMG-taxon_2687453682_annotated_assembly	-	OK042
Geobacter sp. UBA1606	1961388	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.19074	54.3	-	DCNC01	135	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451979	GCA_002321915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/915/GCA_002321915.1_ASM232191v1	28894102	-
Janthinobacterium sp. KBS0711	1649647	PRJNA277721	277721	Proteobacteria	Betaproteobacteria	6.07257	62.7	-	LBCO01	35	5438	5233	5/5/15	4/10/17	Scaffold	Indiana University	SAMN03394979	GCA_000988085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/085/GCA_000988085.1_ASM98808v1	26089434	KBS0711
Caulobacter sp. Root487D2Y	1736547	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	5.0931	68.7	-	LMFD01	16	4674	4541	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155816	GCA_001427165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/165/GCA_001427165.1_Root487D2Y	26633631	Root487D2Y
Dehalococcoides sp. JdFR-56	1935049	PRJNA269163	269163	Terrabacteria group	Chloroflexi	1.79815	56.9	-	MTNR01	95	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226373	GCA_002011495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/495/GCA_002011495.1_ASM201149v1	28350381	-
Maribacter sp. Hel_I_7	1249997	PRJNA217216	217216	FCB group	Bacteroidetes/Chlorobi group	4.77504	34.8	-	JHZW01	3	4171	4054	4/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743898	GCA_000688315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/315/GCA_000688315.1_ASM68831v1	-	Hel_I_7
Yersinia pseudotuberculosis	633	PRJNA239351	239351	Proteobacteria	Gammaproteobacteria	4.72975	47.5	chromosome:NZ_CP009757.1/CP009757.1	-	1	4355	4119	2/9/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03140242	GCA_000834355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/355/GCA_000834355.1_ASM83435v1	25931590	MD67
Yersinia pseudotuberculosis YPIII	502800	PRJNA239354	239354	Proteobacteria	Gammaproteobacteria	4.68944	47.5	chromosome:NZ_CP009792.1/CP009792.1	-	1	4370	4107	2/9/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03144706	GCA_000834375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/375/GCA_000834375.1_ASM83437v1	25931590	YPIII
Roseobacter sp. MedPE-SWde	1860090	PRJNA318731	318731	Proteobacteria	Alphaproteobacteria	4.30987	57.2	-	MPDA01	19	4062	3999	11/10/16	11/10/16	Contig	University Miguel Hernandez	SAMN05219217	GCA_001874205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/205/GCA_001874205.1_ASM187420v1	27446036	-
Marinomonas sp. SBI8L	1561205	PRJNA263856	263856	Proteobacteria	Gammaproteobacteria	5.19123	40.4	-	JSEO01	69	4774	4628	4/20/16	4/12/17	Scaffold	Scripps Institution of Oceanography	SAMN03107782	GCA_001624705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/624/705/GCA_001624705.1_ASM162470v1	-	SBI8L
Roseovarius sp. BRH_c41	1629709	PRJNA257561	257561	Proteobacteria	Alphaproteobacteria	5.00916	61.1	-	LADY01	71	4874	4671	3/24/15	3/24/15	Contig	EPFL	SAMN03400149	GCA_000961715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/715/GCA_000961715.1_41k	-	-
Marinobacter sp. ELB17	270374	PRJNA18955	18955	Proteobacteria	Gammaproteobacteria	4.89474	54.3	-	AAXY01	75	4709	4389	3/6/07	5/19/17	Contig	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436124	GCA_000169375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/375/GCA_000169375.1_ASM16937v1	-	ELB17
Polaribacter sp. Hel1_33_78	1336804	PRJEB16501	349430	FCB group	Bacteroidetes/Chlorobi group	3.22792	30.9	chromosome I:NZ_LT629794.1/LT629794.1	-	1	2819	2734	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04487762	GCA_900106075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/075/GCA_900106075.1_IMG-taxon_2634166548_annotated_assembly	-	Hel1_33_78
Sulfitobacter sp. HI0021	1822224	PRJNA305749	305749	Proteobacteria	Alphaproteobacteria	4.46205	60.8	-	LWEP01	717	4565	3962	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580763	GCA_001634725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/725/GCA_001634725.1_ASM163472v1	-	HI0021
Erythrobacter sp. AP23	499656	PRJNA298412	298412	Proteobacteria	Alphaproteobacteria	3.4021	63.1	-	LNBY01	20	3265	3167	1/29/16	4/16/17	Contig	Xiamen University	SAMN04241768	GCA_001542855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/855/GCA_001542855.1_ASM154285v1	-	AP23
Epulopiscium sp. Nele67-Bin002	1764961	PRJNA294498	294498	Terrabacteria group	Firmicutes	1.1756	34.3	-	LNZP01	128	1116	961	2/27/17	2/27/17	Contig	King Abdullah University of Science and Technology (KAUST)	SAMN04288925	GCA_002007305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/305/GCA_002007305.1_Nele67	-	-
Nocardioides sp. URHA0020	1380392	PRJNA213780	213780	Terrabacteria group	Actinobacteria	4.68462	71.6	-	JIAR01	13	4420	4313	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743956	GCA_000620705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/705/GCA_000620705.1_ASM62070v1	-	URHA0020
Paracoccus sp. S4493	579490	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	3.66011	66.3	-	JXYF01	586	3576	3344	4/1/15	4/17/17	Contig	Technical University of Denmark	SAMN03323959	GCA_000967735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/735/GCA_000967735.1_S4493	25879706	S4493
Candidatus Arthromitus sp. SFB-turkey	1840217	PRJNA319431	319431	Terrabacteria group	Firmicutes	1.63133	26.1	-	LXFF01	41	1586	1490	6/3/16	4/12/17	Scaffold	University of Minnesota	SAMN04889864	GCA_001655775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/775/GCA_001655775.1_ASM165577v1	-	-
Amycolatopsis sp. M39	1825094	PRJNA317178	317178	Terrabacteria group	Actinobacteria	9.90997	69.7	-	LWSF01	63	9223	8409	5/25/16	8/28/17	Scaffold	Hans Knoell Institute	SAMN04600898	GCA_001651785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/785/GCA_001651785.1_ASM165178v1	-	M39
Herbaspirillum sp. B39	95609	PRJDA69973	69973	Proteobacteria	Betaproteobacteria	5.30962	62.7	-	BADF01	1174	5122	4074	12/26/12	5/18/17	Contig	Kazusa DNA Research Institute	SAMD00036576	GCA_000333495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/495/GCA_000333495.1_ASM33349v1	-	B39
Methylobacterium sp. WSM2598	398261	PRJNA88639	88639	Proteobacteria	Alphaproteobacteria	7.66976	71.2	-	ARAA01	5	7071	6621	4/22/13	5/19/17	Scaffold	JGI	SAMN02261324	GCA_000379105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/105/GCA_000379105.1_ASM37910v1	-	WSM2598
Citrobacter sp. KTE32	1169350	PRJNA157619	157619	Proteobacteria	Gammaproteobacteria	4.93394	52.2	-	ASQL01	5	4799	4550	5/16/13	4/10/17	Scaffold	Broad Institute	SAMN00847668	GCA_000398865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/865/GCA_000398865.1_Esch_coli_KTE32_V1	-	KTE32
Fischerella sp. JSC-11	741277	PRJNA61093	61093	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.38	41	-	AGIZ01	34	4606	4339	10/21/11	5/18/17	Contig	DOE Joint Genome Institute	SAMN02256526	GCA_000231365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/365/GCA_000231365.2_ASM23136v1	-	JSC-11
Anabaena sp. CRKS33	1710888	PRJNA294801	294801	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.95001	37.6	-	LJOT01	1109	4868	4638	6/20/16	6/20/16	Contig	Oregon State University	SAMN04028824	GCA_001672075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/075/GCA_001672075.1_ASM167207v1	-	-
Arcobacter sp. 31_11_sub10_T18	1856277	PRJNA320927	320927	Proteobacteria	delta/epsilon subdivisions	1.95552	30.5	-	MAAG01	198	2021	1938	5/31/17	5/31/17	Scaffold	Lawrence Berkeley National Lab	SAMN05179554	GCA_002163065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/065/GCA_002163065.1_ASM216306v1	28652349	-
Treponema endosymbiont of Eucomonympha sp.	1580831	PRJDB3365	286024	Spirochaetes	Spirochaetia	1.61442	55.2	-	BBPW01	757	-	-	6/5/15	10/6/15	Contig	"Microbe Division (RIKEN BRC JCM), RIKEN BioResource Center"	SAMD00023470	GCA_001028545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/545/GCA_001028545.1_ASM102854v1	25979941	D11
Novosphingobium sp. Rr 2-17	555793	PRJNA158437	158437	Proteobacteria	Alphaproteobacteria	4.53903	62.7	-	AKFJ01	166	4251	4019	6/25/12	5/19/17	Contig	Rochester Institute of Technology	SAMN02470867	GCA_000272475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/475/GCA_000272475.1_ASM27247v1	22933764	Rr 2-17
Methylophilus sp. OH31	1387312	PRJDB1444	238883	Proteobacteria	Betaproteobacteria	2.9327	50.6	-	BAUS01	16	2815	2744	2/20/14	6/20/17	Contig	National Institute of Advanced Industrial Science and Technology	SAMD00036779	GCA_000576615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/615/GCA_000576615.1_ASM57661v1	24723716	OH31
Deinococcus sp. UR1	1704277	PRJNA293368	293368	Terrabacteria group	Deinococcus-Thermus	3.89481	68.9	-	LIYN01	606	3856	2387	10/26/15	10/26/15	Contig	University of Regina	SAMN04002371	GCA_001413985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/985/GCA_001413985.1_ASM141398v1	-	UR1
Lactobacillus sp. HMSC17G08	1581051	PRJNA269805	269805	Terrabacteria group	Firmicutes	2.83723	46.7	-	LWNO01	46	2831	2662	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436201	GCA_001807635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/635/GCA_001807635.1_ASM180763v1	-	HMSC17G08
Enterococcus sp. HMSC063D12	1715016	PRJNA296143	296143	Terrabacteria group	Firmicutes	2.7112	38.2	-	LTKP01	129	2733	2551	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04455639	GCA_001808975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/975/GCA_001808975.1_ASM180897v1	-	HMSC063D12
Prevotella sp. F0091	1227276	PRJNA173942	173942	FCB group	Bacteroidetes/Chlorobi group	3.19373	41.1	-	AWUZ01	132	2674	2419	9/16/13	4/9/17	Scaffold	Washington University	SAMN02436813	GCA_000467895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/895/GCA_000467895.1_ASM46789v1	-	F0091
Pantoea sp. Sc1	593105	PRJNA86999	86999	Proteobacteria	Gammaproteobacteria	4.44721	57	-	AJFP01	4	4170	4030	3/20/12	4/17/17	Contig	USDA-ARS	SAMN02472063	GCA_000255315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/315/GCA_000255315.2_ASM25531v2	22582377	Sc1
Sulfurovum sp. FS06-10	1539064	PRJNA259227	259227	Proteobacteria	delta/epsilon subdivisions	2.64379	35.3	-	JQIR01	122	2416	2327	1/29/15	1/29/15	Contig	Penn State	SAMN03002794	GCA_000830185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/185/GCA_000830185.1_ASM83018v1	25620962	-
Polaromonas sp. C04	1945857	PRJNA369723	369723	Proteobacteria	Betaproteobacteria	4.17287	64.3	-	MUNS01	45	3979	3833	2/16/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN06293015	GCA_002002705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/705/GCA_002002705.1_ASM200270v1	-	C04
Exiguobacterium antarcticum B7	1087448	PRJNA73211	73211	Terrabacteria group	Firmicutes	2.81586	47.5	chromosome:NC_018665.1/CP003063.1	-	1	2928	2746	9/27/12	4/8/17	Complete Genome	Rede Paraense de Genomica e Proteomica	SAMN02603748	GCA_000299435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/435/GCA_000299435.1_ASM29943v1	23144424	Eab7
Nocardiopsis sp. JB363	1434837	PRJEB18482	371439	Terrabacteria group	Actinobacteria	7.06799	68.8	-	FRFF01	210	6220	5902	2/6/17	5/31/17	Contig	MICALIS	SAMEA21225418	GCA_900143625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/625/GCA_900143625.1_ASM90014362v1	-	JB363
Serratia sp. JKS000199	1938820	PRJEB22439	401572	Proteobacteria	Gammaproteobacteria	5.12495	59.7	chromosome I:LT907843.1	-	1	4871	4700	9/6/17	9/6/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN06272785	GCA_900215455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/215/455/GCA_900215455.1_IMG-taxon_2703719189_annotated_assembly	-	JKS000199
Thermococcus sp. PK	913025	PRJNA62219	62219	Euryarchaeota	Thermococci	2.17657	44	-	AKID01	7	2459	2175	7/15/13	4/17/17	Scaffold	JGI	SAMN00203929	GCA_000430485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/485/GCA_000430485.1_ASM43048v1	-	PK
Bifidobacterium sp. 70	1960968	PRJNA375083	375083	Terrabacteria group	Actinobacteria	2.27635	65.4	-	MVOG01	72	1862	1703	9/6/17	9/8/17	Contig	University of Parma	SAMN06342336	GCA_002286915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/915/GCA_002286915.1_ASM228691v1	28837128	70
Eubacterium limosum KIST612	903814	PRJNA52281	52281	Terrabacteria group	Firmicutes	4.31671	47.5	chromosome:NC_014624.2/CP002273.2	-	1	4109	4005	10/15/10	5/18/17	Complete Genome	Computational and Synthetic Biology Laboratory	SAMN02603161	GCA_000152245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/245/GCA_000152245.2_ASM15224v2	21036996	KIST612
Desulfitobacterium hafniense DCB-2	272564	PRJNA205	205	Terrabacteria group	Firmicutes	5.27913	47.5	chromosome:NC_011830.1/CP001336.1	-	1	5038	4821	1/5/09	5/18/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598433	GCA_000021925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/925/GCA_000021925.1_ASM2192v1	22316246	DCB-2
Yersinia pseudotuberculosis YPIII	502800	PRJNA28743	28743	Proteobacteria	Gammaproteobacteria	4.68944	47.5	chromosome:NC_010465.1/CP000950.1	-	1	4372	4109	3/11/08	3/30/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598457	GCA_000019465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/465/GCA_000019465.1_ASM1946v1	-	YPIII
Shewanella sp. 38A_GOM-205m	1380363	PRJNA213750	213750	Proteobacteria	Gammaproteobacteria	4.73935	53.1	-	JADP01	57	4284	4097	1/10/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02584982	GCA_000518445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/445/GCA_000518445.1_ASM51844v1	-	38A_GOM-205m
Nocardia sp. NRRL WC-3656	1463824	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.2818	67.9	-	JOJF01	152	6576	6336	7/2/14	4/9/17	Contig	University of Illinois	SAMN02645526	GCA_000720265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/265/GCA_000720265.1_ASM72026v1	-	NRRL WC-3656
Escherichia sp. KTE31	1169349	PRJNA157617	157617	Proteobacteria	Gammaproteobacteria	4.55698	50.6	-	ASTZ01	9	4545	4258	5/31/13	2/22/17	Scaffold	Broad Institute	SAMN00847667	GCA_000407925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/925/GCA_000407925.1_Esch_coli_KTE31_V1	-	KTE31
Vibrio cholerae	666	PRJNA301765	301765	Proteobacteria	Gammaproteobacteria	4.07658	47.4904	chromosome 1:NZ_CP013319.1/CP013319.1; chromosome 2:NZ_CP013320.1/CP013320.1	-	2	3929	3683	11/30/16	3/28/17	Complete Genome	Nankai University	SAMN04256438	GCA_001887615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/615/GCA_001887615.1_ASM188761v1	27849586	NCTC9420
Corynebacterium sp. KPL1996	1203625	PRJNA170365	170365	Terrabacteria group	Actinobacteria	2.57602	59.3	-	AXLP01	3	2432	2282	10/21/13	4/17/17	Scaffold	Broad Institute	SAMN02596996	GCA_000477915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/915/GCA_000477915.1_Cory_sp_KPL1996_V1	-	KPL1996
Staphylococcus sp. NAM3COL9	1667172	PRJNA286142	286142	Terrabacteria group	Firmicutes	2.73087	33.1	-	LGPC01	16	2612	2510	11/4/15	4/11/17	Scaffold	University of Guelph	SAMN03771355	GCA_001431205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/205/GCA_001431205.1_ASM143120v1	-	NA309
Vibrio cholerae IEC224	1134456	PRJNA81153	81153	Proteobacteria	Gammaproteobacteria	4.07959	47.4898	chromosome I:NC_016944.1/CP003330.1; chromosome II:NC_016945.1/CP003331.1	-	2	3915	3722	2/29/12	3/23/17	Complete Genome	Instituto Evandro Chagas	SAMN02603415	GCA_000250855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/855/GCA_000250855.1_ASM25085v1	"2,266,214,022,535,940"	IEC224
Vibrio cholerae	666	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.04214	47.4878	chromosome 1:NZ_CP020408.1/CP020408.1; chromosome 2:NZ_CP020407.1/CP020407.1	-	2	3878	3606	3/29/17	4/1/17	Complete Genome	US Food and Drug Administration 	SAMN04875560	GCA_002073335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/335/GCA_002073335.1_ASM207333v1	-	FDAARGOS_223
Leptolyngbya sp. JSC-1	1487953	PRJNA62993	62993	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.86682	50.7	-	JMKF01	2	6491	6119	7/25/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743038	GCA_000733415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/415/GCA_000733415.1_ASM73341v1	25214622	JSC-1
Nitrosomonas sp. Nm51	133720	PRJEB17019	351150	Proteobacteria	Betaproteobacteria	3.24487	47.4	-	FOGH01	131	3035	2813	10/29/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421690	GCA_900111165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/165/GCA_900111165.1_IMG-taxon_2675903037_annotated_assembly	-	Nm51
Ruegeria sp. ZGT108	1685378	PRJNA307147	307147	Proteobacteria	Alphaproteobacteria	4.25805	56.7	-	LQBP01	33	4111	4004	1/8/16	4/11/17	Contig	"Red Sea Research Center, Saudi Arabia"	SAMN04376033	GCA_001507545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/545/GCA_001507545.1_ASM150754v1	-	ZGT108
Vibrio cholerae O1 biovar El Tor str. N16961	243277	PRJNA36	36	Proteobacteria	Gammaproteobacteria	4.03346	47.4873	chromosome I:NC_002505.1/AE003852.1; chromosome II:NC_002506.1/AE003853.1	-	2	3693	3504	6/14/00	8/3/16	Complete Genome	TIGR	SAMN02603969	GCA_000006745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/006/745/GCA_000006745.1_ASM674v1	10952301	N16961
Yersinia pseudotuberculosis	633	PRJNA239350	239350	Proteobacteria	Gammaproteobacteria	4.77456	47.4599	chromosome:NZ_CP009759.1/CP009759.1; plasmid pCD:NZ_CP009758.1/CP009758.1	-	2	4426	4144	2/9/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03140184	GCA_000834415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/415/GCA_000834415.1_ASM83441v1	25931590	EP2/+
Clostridium sp. 7_2_43FAA	457396	PRJNA32457	32457	Terrabacteria group	Firmicutes	3.81312	27.8	-	ACDK02	5	3552	3363	2/18/09	4/17/17	Scaffold	Broad Institute	SAMN02463700	GCA_000158375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/375/GCA_000158375.2_Clostridium_sp_7_2_43FAA_V2	-	7_2_43FAA
Yersinia pseudotuberculosis PB1/+	502801	PRJNA239343	239343	Proteobacteria	Gammaproteobacteria	4.76539	47.459	chromosome:NZ_CP009780.1/CP009780.1; plasmid pYAB:NZ_CP009779.1/CP009779.1	-	2	4420	4167	2/9/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03144729	GCA_000834475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/475/GCA_000834475.1_ASM83447v1	25931590	PB1/+
Frankia sp. ACN1ag	102891	PRJNA275977	275977	Terrabacteria group	Actinobacteria	7.52105	72.5	-	LJPA01	90	6287	5848	10/26/15	4/16/17	Scaffold	University of New Hampshire	SAMN03353435	GCA_001414035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/035/GCA_001414035.1_ACN1AG	26679592	ACN1ag
Bacillus altitudinis	293387	PRJNA253622	253622	Terrabacteria group	Firmicutes	3.7437	41.3	-	JOVS02	8	3862	3704	12/4/14	4/11/17	Scaffold	Kazan Federal University	SAMN02873991	GCA_000789425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/425/GCA_000789425.2_ASM78942v2	25635022	B-388
Flavobacterium sp. Root186	1736485	PRJNA297942	297942	FCB group	Bacteroidetes/Chlorobi group	5.53014	33.7	-	LMHW01	17	4744	4615	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155754	GCA_001428525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/525/GCA_001428525.1_Root186	26633631	Root186
Klebsiella sp. 4_1_44FAA	665944	PRJNA40025	40025	Proteobacteria	Gammaproteobacteria	5.52504	57	-	ACWO01	78	5667	5121	12/16/11	2/21/17	Scaffold	Broad Institute	SAMN02463798	GCA_000238715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/715/GCA_000238715.1_Klebsiella_sp_4_1_44FAA_V1	-	4_1_44FAA
Bacillus safensis FO-36b	1178541	PRJNA162775	162775	Terrabacteria group	Firmicutes	3.73174	41.6	-	ASJD01	37	3856	3741	5/15/14	4/2/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02746691	GCA_000691165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/165/GCA_000691165.1_ASM69116v1	-	FO-36b
Acinetobacter sp. RUH2624	575564	PRJNA38511	38511	Proteobacteria	Gammaproteobacteria	3.95263	38.8	-	ACQF02	8	3814	3579	9/30/09	4/10/17	Scaffold	Broad Institute	SAMN02463742	GCA_000162375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/375/GCA_000162375.2_Acin_sp_RUH2624_V1	23144699	RUH2624
Oribacterium sp. P6A1	1410612	PRJNA223469	223469	Terrabacteria group	Firmicutes	3.69711	42.5	-	JNKO01	95	3231	3058	6/11/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02841191	GCA_000702885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/885/GCA_000702885.1_ASM70288v1	-	P6A1
Pseudomonas kilonensis	132476	PRJEB16478	349378	Proteobacteria	Gammaproteobacteria	6.41538	60.8	-	FNTT01	2	5775	5555	10/22/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04490188	GCA_900105635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/635/GCA_900105635.1_IMG-taxon_2639762655_annotated_assembly	-	BS3780
Bordetella holmesii 44057	1172205	PRJNA158371	158371	Proteobacteria	Betaproteobacteria	3.43167	62.8	-	ANGE01	298	3303	2608	12/5/12	3/31/17	Contig	Columbia University	SAMN00857838	GCA_000317335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/335/GCA_000317335.1_44057_CLC_assembly	23620158	44057
Paeniclostridium sordellii	1505	PRJEB8121	277647	Terrabacteria group	Firmicutes	3.44077	27.4	-	CEMX01	22	3354	3231	3/13/15	4/10/17	Contig	WTSI	SAMEA1572099	GCA_001372335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/335/GCA_001372335.1_R32462	-	R32462
Yersinia pseudotuberculosis PB1/+	502801	PRJNA28745	28745	Proteobacteria	Gammaproteobacteria	4.76543	47.459	chromosome:NC_010634.1/CP001048.1; plasmid pYPTS01:NC_010635.1/CP001049.1	-	2	4418	4166	4/25/08	3/30/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598458	GCA_000020085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/085/GCA_000020085.1_ASM2008v1	-	PB1/+
Acidipropionibacterium acidipropionici DSM 4900	1111734	PRJNA163043	163043	Terrabacteria group	Actinobacteria	3.58936	68.8	-	ATYU01	52	3328	3141	7/15/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441222	GCA_000427845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/845/GCA_000427845.1_ASM42784v1	-	DSM 4900
Mycobacterium phlei DSM 43071	1384515	PRJNA214718	214718	Terrabacteria group	Actinobacteria	5.30682	69.5	-	JPUH01	271	5220	4887	3/8/16	4/12/17	Contig	Uppasala University & Jawaharlal Nehru University	SAMN02951394	GCA_001582025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/025/GCA_001582025.1_ASM158202v1	26941228	DSM 43071
Vibrio cholerae	666	PRJNA301765	301765	Proteobacteria	Gammaproteobacteria	4.09912	47.4585	chromosome 1:NZ_CP013305.1/CP013305.1; chromosome 2:NZ_CP013306.1/CP013306.1	-	2	3964	3769	11/30/16	3/28/17	Complete Genome	Nankai University	SAMN04256433	GCA_001887455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/455/GCA_001887455.1_ASM188745v1	27849586	CRC1106
Staphylococcus equorum subsp. equorum	29383	PRJNA275686	275686	Terrabacteria group	Firmicutes	2.79987	33.1	-	LAKE01	22	2729	2618	4/27/15	4/3/17	Contig	Institute of Microbial Technology	SAMN03352179	GCA_000981135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/135/GCA_000981135.1_ASM98113v1	-	G8HB1
Cronobacter dublinensis 582	1208661	PRJEB160	181123	Proteobacteria	Gammaproteobacteria	4.76479	57.3	-	CALA01	427	4979	3653	11/15/12	5/18/17	Scaffold	LifeTech	SAMEA2272594	GCA_000319495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/495/GCA_000319495.1_ASM31949v1	23166675	582
Bradyrhizobium elkanii USDA 94	398524	PRJNA165317	165317	Proteobacteria	Alphaproteobacteria	9.55889	63.7	-	JAFC01	164	9038	8504	1/10/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02584917	GCA_000519225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/225/GCA_000519225.1_ASM51922v1	-	USDA 94
Alcaligenes faecalis	511	PRJNA300936	300936	Proteobacteria	Betaproteobacteria	4.16548	56.4	-	LNOL01	17	3823	3740	1/22/16	4/4/17	Scaffold	Hubei Academy of Agricultural Sciences	SAMN04230916	GCA_001530325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/325/GCA_001530325.1_ASM153032v1	27056227	NBIB-017
Pseudomonas avellanae CRAFRUee3	1420590	PRJNA227272	227272	Proteobacteria	Gammaproteobacteria	5.6493	59	-	AYRJ01	514	5331	4888	4/23/15	4/11/17	Contig	CRA	SAMN03497683	GCA_000978635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/978/635/GCA_000978635.2_ASM97863v2	-	CRAFRUee3
Vibrio cholerae	666	PRJNA301765	301765	Proteobacteria	Gammaproteobacteria	4.10204	47.4574	chromosome 1:NZ_CP013301.1/CP013301.1; chromosome 2:NZ_CP013302.1/CP013302.1	-	2	3964	3769	11/30/16	3/28/17	Complete Genome	Nankai University	SAMN04256432	GCA_001887395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/395/GCA_001887395.1_ASM188739v1	27849586	C5
Vibrio cholerae	666	PRJNA301765	301765	Proteobacteria	Gammaproteobacteria	4.11087	47.456	chromosome 1:NZ_CP013309.1/CP013309.1; chromosome 2:NZ_CP013310.1/CP013310.1	-	2	3993	3784	11/30/16	3/28/17	Complete Genome	Nankai University	SAMN04256439	GCA_001887495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/495/GCA_001887495.1_ASM188749v1	27849586	E1162
Pseudomonas fuscovaginae ICMP 5940	1367451	PRJDB1420	219087	Proteobacteria	Gammaproteobacteria	6.37897	61.2	-	BATG01	459	5904	3988	9/12/13	4/2/17	Contig	Charles Sturt University	SAMD00000756	GCA_000467065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/065/GCA_000467065.1_ASM46706v1	-	ICMP5940
Pseudomonas mandelii	75612	PRJNA381535	381535	Proteobacteria	Gammaproteobacteria	6.66883	59.3	-	NMOJ01	251	6211	5872	8/14/17	8/16/17	Contig	Spanish National Centre for Biotechnology	SAMN06679994	GCA_002251635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/635/GCA_002251635.1_ASM225163v1	-	6A1
Acinetobacter bereziniae	106648	PRJEB7120	271436	Proteobacteria	Gammaproteobacteria	4.77615	38	-	CDEL01	324	4542	4306	12/31/14	4/3/17	Scaffold	CARDIFF UNIVERSITY	SAMEA2779767	GCA_000825165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/165/GCA_000825165.1_AberCHI-40-1	-	CHI-40-1
Photorhabdus temperata subsp. temperata M1021	1221520	PRJNA172645	172645	Proteobacteria	Gammaproteobacteria	5.59825	43.8	-	AUXQ01	298	4523	4439	8/15/13	1/8/14	Contig	Kyungpook National University	SAMN02470223	GCA_000447415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/415/GCA_000447415.1_PhoTem1.0	24029767	M1021
Vibrio cholerae MS6	1420885	PRJDB1528	253010	Proteobacteria	Gammaproteobacteria	4.03094	47.4557	chromosome 1:NZ_AP014524.1/AP014524.1; chromosome 2:NZ_AP014525.1/AP014525.1	-	2	3903	3701	6/17/14	3/25/17	Complete Genome	"Research Institute for Microbial Diseases, Osaka University"	SAMD00061025	GCA_000829215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/215/GCA_000829215.1_ASM82921v1	24887199	MS6
Vibrio ordalii FS-238	617133	PRJNA164837	164837	Proteobacteria	Gammaproteobacteria	3.89485	44.5	-	AJYS02	281	3569	3426	8/13/12	4/13/17	Scaffold	MIT	SAMN02470454	GCA_000287155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/155/GCA_000287155.2_ASM28715v2	22955834	FS-238
Enterococcus cecorum	44008	PRJNA284445	284445	Terrabacteria group	Firmicutes	2.3044	36.2	-	LDOX01	28	2304	2156	6/5/15	4/3/17	Contig	Warsaw University of Life Sciences (SGGW)	SAMN03702600	GCA_001020445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/445/GCA_001020445.1_ASM102044v1	26404586	1711s24
Moraxella osloensis	34062	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.63724	43.3	-	LZMT01	60	2386	2277	7/5/16	4/13/17	Scaffold	TAILORED-Treatment project	SAMN05219448	GCA_001679275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/275/GCA_001679275.1_ASM167927v1	-	CCUG 67237
Vibrio cyclitrophicus	47951	PRJNA322701	322701	Proteobacteria	Gammaproteobacteria	5.04547	43.5	-	LZFR01	65	4471	4258	6/23/16	4/5/17	Contig	UC Davis	SAMN05172611	GCA_001675885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/885/GCA_001675885.1_ASM167588v1	-	UCD-FRSP16_1
Pseudomonas fragi B25	1136138	PRJNA81403	81403	Proteobacteria	Gammaproteobacteria	5.02039	59.3	-	AHZX01	11	4633	4340	2/24/12	5/19/17	Scaffold	Nanjing Normal University	SAMN02470566	GCA_000250615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/615/GCA_000250615.1_ASM25061v1	22628506	B25
Megasphaera elsdenii	907	PRJEB17368	351543	Terrabacteria group	Firmicutes	2.42191	53	-	FOQP01	34	2292	2144	10/31/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910401	GCA_900113775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/775/GCA_900113775.1_IMG-taxon_2593339209_annotated_assembly	-	YE34
Xanthomonas fragariae LMG 25863	1131451	PRJNA80793	80793	Proteobacteria	Gammaproteobacteria	4.18255	62.2	-	AJRZ01	96	3978	3152	4/22/13	6/15/17	Contig	Institute of Agricultural and Fisheries Research	SAMN01048198	GCA_000376745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/745/GCA_000376745.1_ASM37674v1	24274055	LMG 25863
Lactobacillus mucosae	97478	PRJEB16233	348977	Terrabacteria group	Firmicutes	1.88067	46.7	-	FNIH01	39	1846	1698	10/20/16	4/5/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216430	GCA_900103925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/925/GCA_900103925.1_IMG-taxon_2654588121_annotated_assembly	-	WCC8
Cronobacter malonaticus	413503	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.61475	56.6	-	MSAC01	110	4527	4274	12/28/16	4/6/17	Contig	FDA/CFSAN	SAMN04329586	GCA_001922805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/805/GCA_001922805.1_ASM192280v1	-	MOD1-Md25g
Pseudoalteromonas luteoviolacea NCIMB 1944	1365254	PRJNA213500	213500	Proteobacteria	Gammaproteobacteria	6.36011	42.3	-	AUXS01	107	5310	5134	4/22/16	4/5/17	Contig	Technical University of Denmark	SAMN02250938	GCA_001625565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/625/565/GCA_001625565.1_NCIMB1944_1.0	-	NCIMB 1944
Rufibacter tibetensis	512763	PRJNA242661	242661	FCB group	Bacteroidetes/Chlorobi group	5.41347	47.4097	chromosome:NZ_CP012643.1/CP012643.1; plasmid 1:NZ_CP012644.1/CP012644.1; plasmid 2:NZ_CP012645.1/CP012645.1	-	3	4471	4341	10/9/15	4/16/17	Complete Genome	Hubei University of Technology	SAMN02711851	GCA_001310085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/085/GCA_001310085.1_ASM131008v1	-	1351
Pseudomonas monteilii QM	1123524	PRJNA78179	78179	Proteobacteria	Gammaproteobacteria	5.76314	61.8	-	AHGZ01	278	5465	5180	5/8/12	5/19/17	Contig	"School of Environmental Science and Technology, Dalian University of Technology"	SAMN02470886	GCA_000262005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/005/GCA_000262005.1_ASM26200v1	22843591	QM
Citrobacter werkmanii	67827	PRJNA380863	380863	Proteobacteria	Gammaproteobacteria	5.21558	51.9	-	NDXY01	43	5149	4894	4/28/17	5/3/17	Scaffold	Institute of Microbial Technology	SAMN06660612	GCA_002114305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/305/GCA_002114305.1_ASM211430v1	-	AK-8
Mycoplasma canis UFG1	1131454	PRJNA80799	80799	Terrabacteria group	Tenericutes	0.868614	27	-	AJFT01	5	682	625	4/17/12	3/30/17	Contig	University of Florida	SAMN02471765	GCA_000258985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/985/GCA_000258985.1_ASM25898v1	22815452	UFG1
Streptomyces acidiscabies	42234	PRJNA322224	322224	Terrabacteria group	Actinobacteria	10.5562	70.6	-	LYDV01	993	9777	8652	1/10/17	3/15/17	Contig	University of Florida	SAMN05111124	GCA_001941325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/325/GCA_001941325.1_ASM194132v1	-	FL01
Idiomarina piscisalsi	1096243	PRJNA391387	391387	Proteobacteria	Gammaproteobacteria	2.5875	47.4	chromosome:NZ_CP022133.1/CP022133.1	-	1	2454	2346	6/30/17	10/2/17	Complete Genome	"Shin's Lab., Kyungpook National University"	SAMN07267296	GCA_002211765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/765/GCA_002211765.1_ASM221176v1	-	10PY1A
Wolbachia pipientis wUni	1379787	PRJNA213628	213628	Proteobacteria	Alphaproteobacteria	1.04917	35.2	-	MUJL01	130	1050	856	2/2/17	4/10/17	Contig	Indiana University	SAMN02263889	GCA_001983635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/635/GCA_001983635.1_ASM198363v1	27189996	wUni
Janthinobacterium lividum	29581	PRJNA309034	309034	Proteobacteria	Betaproteobacteria	6.70965	62.4	-	LRHW01	125	5916	5708	10/11/16	4/5/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04320695	GCA_001758635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/635/GCA_001758635.1_ASM175863v1	27833590	H-24
Rhodococcus rhodochrous NBRC 16069	1219024	PRJDB303	172271	Terrabacteria group	Actinobacteria	5.20172	68.2	-	BBXP01	83	4788	4607	6/24/15	4/3/17	Contig	National Institute of Technology and Evaluation	SAMD00034188	GCA_001047055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/055/GCA_001047055.1_ASM104705v1	-	NBRC 16069
Pseudomonas psychrotolerans	237610	PRJNA278439	278439	Proteobacteria	Gammaproteobacteria	5.33948	64.9	-	LDSX01	173	4833	4682	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401433	GCA_001476445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/445/GCA_001476445.1_ASM147644v1	26793183	SB18
Bartonella birtlesii H12	1201033	PRJNA168998	168998	Proteobacteria	Alphaproteobacteria	1.87187	39	-	ALWY01	15	-	-	9/11/12	1/8/14	Scaffold	URMITE	SAMN02472054	GCA_000296235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/235/GCA_000296235.1_ASM29623v1	23611908	H12
Xanthomonas arboricola pv. pruni MAFF 301420	1418095	PRJDB1524	235282	Proteobacteria	Gammaproteobacteria	5.00276	65.3	-	BAVC01	396	4513	3675	1/11/14	8/8/17	Contig	"NARO Institute of Fruit Tree Science (NIFTS), National Agriculture and Food Research Organization (NARO)"	SAMD00036782	GCA_000521365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/365/GCA_000521365.1_ASM52136v1	-	MAFF301420
Salinispora pacifica CNT045	1169190	PRJNA175155	175155	Terrabacteria group	Actinobacteria	5.77197	69.6	-	ARGL01	80	5427	4996	4/19/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441366	GCA_000374765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/765/GCA_000374765.1_ASM37476v1	-	CNT045
Leptospira alexanderi	100053	PRJNA257144	257144	Spirochaetes	Spirochaetia	4.06096	40.3	-	JQGW01	238	4004	3566	3/2/17	3/4/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947772	GCA_002009845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/845/GCA_002009845.1_ASM200984v1	-	56659
Leptospira kirschneri str. H1	1049966	PRJNA74079	74079	Spirochaetes	Spirochaetia	4.59473	36.1	-	AHMY02	75	4261	3725	1/24/12	5/18/17	Contig	J. Craig Venter Institute	SAMN02436372	GCA_000243915.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/915/GCA_000243915.3_gls454081v2.0	-	H1
Xanthomonas vasicola	56459	PRJNA264614	264614	Proteobacteria	Gammaproteobacteria	4.85107	63.3	-	JSBV01	90	4482	3918	11/6/14	4/2/17	Scaffold	University of Exeter	SAMN03140147	GCA_000772695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/695/GCA_000772695.1_NCPPB1241v1	-	NCPPB 1241
Dehalococcoides mccartyi	61435	PRJNA376155	376155	Terrabacteria group	Chloroflexi	1.42846	47.4	chromosome:NZ_CP019867.1/CP019867.1	-	1	1563	1483	2/28/17	3/2/17	Complete Genome	University of Toronto	SAMN06350858	GCA_002007845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/845/GCA_002007845.1_ASM200784v1	-	KBDCA1
Paenibacillus peoriae	59893	PRJNA343020	343020	Terrabacteria group	Firmicutes	6.14096	45.5	-	MRTU01	71	5355	5112	1/18/17	4/6/17	Contig	Cornell University	SAMN05929626	GCA_001956225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/225/GCA_001956225.1_ASM195622v1	-	FSL R7-0131
Dehalococcoides mccartyi	61435	PRJNA269960	269960	Terrabacteria group	Chloroflexi	1.37458	47.4	chromosome:CP017572.1	-	1	1466	1386	10/12/16	10/12/16	Complete Genome	University of Toronto	SAMN05859286	GCA_001761445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/445/GCA_001761445.1_ASM176144v1	-	-
Carnobacterium maltaromaticum DSM 20342	1449341	PRJNA234883	234883	Terrabacteria group	Firmicutes	3.87669	34.4	-	JQMX01	5	3677	3471	8/28/14	4/2/17	Contig	DOE Joint Genome Institute	SAMN02786975	GCA_000744945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/945/GCA_000744945.1_ASM74494v1	-	MX5
Enterococcus mundtii CRL35	1450511	PRJNA235315	235315	Terrabacteria group	Firmicutes	2.86632	38.3	-	JDFT01	69	2757	2570	4/1/14	4/2/17	Contig	Centro de Referencia para Lactobacilos (CERELA)	SAMN02952976	GCA_000611895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/895/GCA_000611895.1_E.mundtiiCRL35_1.0	24855298	CRL35
Rhodococcus fascians GIC36	1443900	PRJNA233522	233522	Terrabacteria group	Actinobacteria	5.55817	64.5	-	JMER01	46	5232	5060	9/30/14	4/2/17	Scaffold	Oregon State University	SAMN02569999	GCA_000760815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/815/GCA_000760815.1_R_fas_GIC36	-	GIC36
Leptospirillum ferriphilum	178606	PRJNA353751	353751	Nitrospirae	Nitrospira	2.34068	54.7	-	MPOK01	104	2449	2308	2/16/17	7/3/17	Contig	Central South University	SAMN06019636	GCA_002002665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/665/GCA_002002665.1_ASM200266v1	28529505	ZJ
Rhodococcus ruber Chol-4	1240349	PRJNA176883	176883	Terrabacteria group	Actinobacteria	5.46471	70.7	-	ANGC02	44	5001	4861	3/21/13	4/11/17	Scaffold	UCM	SAMN01804522	GCA_000347955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/955/GCA_000347955.2_ASM34795v2	23682139	Chol-4
Flavobacterium columnare	996	PRJNA369093	369093	FCB group	Bacteroidetes/Chlorobi group	3.28458	31.5	-	MUAW01	13	2903	2771	2/10/17	4/6/17	Contig	University of Connecticut Graf Lab	SAMN06277069	GCA_001995115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/115/GCA_001995115.1_ASM199511v1	-	CSF-298-10
Rhodococcus pyridinivorans	103816	PRJEB16436	349339	Terrabacteria group	Actinobacteria	5.26248	67.8	-	FNRX01	3	4864	4604	10/22/16	4/5/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04490240	GCA_900105195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/195/GCA_900105195.1_IMG-taxon_2630969012_annotated_assembly	-	DSM 44555
Arcobacter cryaerophilus	28198	PRJNA307600	307600	Proteobacteria	delta/epsilon subdivisions	2.10178	27.4	-	LRUS01	91	2195	2100	2/25/16	4/11/17	Scaffold	Agriculture and Agri-Food Canada	SAMN04386093	GCA_001573015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/015/GCA_001573015.1_ASM157301v1	-	L399
Campylobacter lanienae	75658	PRJNA341007	341007	Proteobacteria	delta/epsilon subdivisions	1.64359	34.2	-	MJJY01	102	1699	1593	5/15/17	9/19/17	Contig	USDA	SAMN05687027	GCA_002138675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/675/GCA_002138675.1_ASM213867v1	28854596	RM10695
Enterococcus durans IPLA 655	1288492	PRJNA188163	188163	Terrabacteria group	Firmicutes	3.05905	37.7	-	AOSM01	145	2970	2737	4/3/13	4/8/17	Contig	Instituto de Productos Lacteos de Asturias (IPLA-CSIC)	SAMN02470053	GCA_000350465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/465/GCA_000350465.1_Edurans6552.0	23682153	IPLA 655
Neorhizobium galegae bv. orientalis	323655	PRJEB6976	282473	Proteobacteria	Alphaproteobacteria	6.54642	61.5	-	CCRL01	99	6336	6081	4/28/15	4/3/17	Contig	UH	SAMEA2698478	GCA_000985955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/955/GCA_000985955.1_NgalHAMBI2566Draft	-	-
Raoultella planticola	575	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.73575	55.5	-	JUZO01	181	5540	5311	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197826	GCA_001065685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/685/GCA_001065685.1_ASM106568v1	26230489	626_SENT
Acinetobacter ursingii	108980	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.16492	40.2	-	BBUB01	31	2957	2859	2/20/15	4/3/17	Contig	National Institute of Technology and Evaluation	SAMD00020358	GCA_000949815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/815/GCA_000949815.1_ASM94981v1	-	NBRC 110512
Sulfobacillus thermosulfidooxidans	28034	PRJNA339389	339389	Terrabacteria group	Firmicutes	3.18007	48.5	-	MDZD01	33	3088	2979	1/17/17	5/8/17	Contig	Central South University	SAMN05590279	GCA_001953285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/285/GCA_001953285.1_ASM195328v1	-	DX
Emticicia oligotrophica	312279	PRJEB19501	380479	FCB group	Bacteroidetes/Chlorobi group	0.16933	35.8	-	FXVC01	14	-	-	5/12/17	5/12/17	Scaffold	UNIVERSITY OF DELHI	SAMEA103916783	GCA_900177605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/605/GCA_900177605.1_Emticicia_sp._MM	-	-
Leclercia adecarboxylata	83655	PRJNA369235	369235	Proteobacteria	Gammaproteobacteria	5.13802	55.2	-	MUFS01	214	4954	4648	2/10/17	4/17/17	Scaffold	hopital bicetre	SAMN06281932	GCA_001995135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/135/GCA_001995135.1_ASM199513v1	-	I1
Eubacterium limosum	1736	PRJNA280903	280903	Terrabacteria group	Firmicutes	4.15033	47.4	chromosome:NZ_CP011914.1/CP011914.1	-	1	3895	3747	12/23/15	4/11/17	Complete Genome	"AgResearch, Grasslands Research Institute"	SAMN03480621	GCA_001481725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/725/GCA_001481725.1_ASM148172v1	26981167	SA11
Pseudomonas viridiflava UASWS0038	450396	PRJNA19911	19911	Proteobacteria	Gammaproteobacteria	5.91081	59.4	-	AMQP01	201	5355	5175	10/22/12	5/19/17	Contig	University of Applied Science of Western Switzerland//Geneva	SAMN02471545	GCA_000307715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/715/GCA_000307715.1_PseVir1.0	23405356	UASWS0038
Actinobacillus suis	716	PRJNA288594	288594	Proteobacteria	Gammaproteobacteria	2.40958	40.2	-	MTBV01	80	2268	2150	4/6/17	4/8/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN03817046	GCA_002081685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/685/GCA_002081685.1_ASM208168v1	-	ATCC 15557
Bacillus simplex	1478	PRJNA395369	395369	Terrabacteria group	Firmicutes	5.46042	40.3	-	NQLS01	354	5239	5021	8/29/17	8/30/17	Contig	Bielefeld University	SAMN07372736	GCA_002276345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/345/GCA_002276345.1_ASM227634v1	-	7894
Flavonifractor plautii	292800	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.76152	61	-	NFJM01	40	3680	3527	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473680	GCA_002159865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/865/GCA_002159865.1_ASM215986v1	-	An248
Anaerostipes hadrus	649756	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.95618	37.1	-	CYZM01	90	2873	2706	10/1/15	4/4/17	Contig	SC	SAMEA3545326	GCA_001404955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/955/GCA_001404955.1_13470_2_79	-	2789STDY5834860
Oblitimonas alkaliphila	1697053	PRJNA291610	291610	Proteobacteria	Gammaproteobacteria	2.49403	47.4	chromosome:NZ_CP012358.1/CP012358.1	-	1	2414	2310	8/13/15	4/4/17	Complete Genome	CDC	SAMN03946311	GCA_001267175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/175/GCA_001267175.1_ASM126717v1	26679585	B4199
Pseudomonas pseudoalcaligenes NBRC 14167	1215116	PRJDB224	171643	Proteobacteria	Gammaproteobacteria	4.70241	62.2	-	BDAJ01	204	4595	4168	4/4/17	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046936	GCA_002091775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/775/GCA_002091775.1_ASM209177v1	-	NBRC 14167
Staphylococcus xylosus	1288	PRJNA271205	271205	Terrabacteria group	Firmicutes	3.06455	32.5	-	JXAU01	65	2924	2792	1/6/15	4/2/17	Contig	National Bureau of Agricultrally Important Microorganisms	SAMN03273298	GCA_000815285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/285/GCA_000815285.1_StaXyl1.0	-	LSR_02N
Oblitimonas alkaliphila	1697053	PRJNA291610	291610	Proteobacteria	Gammaproteobacteria	2.2944	47.4	chromosome:NZ_CP012362.1/CP012362.1	-	1	2200	2106	8/13/15	4/4/17	Complete Genome	CDC	SAMN03946922	GCA_001267255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/255/GCA_001267255.1_ASM126725v1	26679585	D3318
Mycobacterium chelonae	1774	PRJNA347845	347845	Terrabacteria group	Actinobacteria	5.17159	64	-	MLHX01	33	5136	5013	10/26/16	4/5/17	Contig	University of Georgia	SAMN05897979	GCA_001853605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/605/GCA_001853605.1_ASM185360v1	-	35599
Azospirillum brasilense	192	PRJNA248254	248254	Proteobacteria	Alphaproteobacteria	7.08277	68.4	-	JPIR01	591	6367	6125	3/14/17	3/16/17	Contig	Hebrew University of Jerusalem	SAMN02796066	GCA_002027385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/385/GCA_002027385.1_ASM202738v1	-	Sp 7
Oblitimonas alkaliphila	1697053	PRJNA291610	291610	Proteobacteria	Gammaproteobacteria	2.39199	47.4	chromosome:NZ_CP012363.1/CP012363.1	-	1	2282	2183	8/13/15	4/4/17	Complete Genome	CDC	SAMN03948284	GCA_001267275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/275/GCA_001267275.1_ASM126727v1	26679585	E1086
Actinomyces naeslundii	1655	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.22692	67.5	-	MSLA01	32	2737	2575	1/5/17	4/6/17	Scaffold	King's College London	SAMN05898713	GCA_001937605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/605/GCA_001937605.1_ASM193760v1	-	R13240
Tannerella forsythia	28112	PRJEB15383	345086	FCB group	Bacteroidetes/Chlorobi group	3.27237	47.1	-	FMML01	98	2740	2585	10/1/16	6/12/17	Scaffold	UNIVERSITY OF SHEFFIELD	SAMEA4441424	GCA_900096715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/096/715/GCA_900096715.1_TFUB22	-	UB22
Prevotella intermedia ATCC 25611 = DSM 20706	1122984	PRJNA185645	185645	FCB group	Bacteroidetes/Chlorobi group	2.56453	43.3	-	AUTZ01	21	2276	2141	7/19/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02440707	GCA_000439065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/065/GCA_000439065.1_ASM43906v1	-	DSM 20706
Oblitimonas alkaliphila	1697053	PRJNA291610	291610	Proteobacteria	Gammaproteobacteria	2.37726	47.4	chromosome:NZ_CP012364.1/CP012364.1	-	1	2286	2173	8/13/15	4/4/17	Complete Genome	CDC	SAMN03948285	GCA_001267295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/295/GCA_001267295.1_ASM126729v1	26679585	E1148
Yersinia kristensenii	28152	PRJNA240099	240099	Proteobacteria	Gammaproteobacteria	4.49657	47.4	chromosome:NZ_CP009997.1/CP009997.1	-	1	4180	3928	2/9/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03202900	GCA_000834865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/865/GCA_000834865.1_ASM83486v1	25931590	Y231
Komagataeibacter europaeus NBRC 3261	1234669	PRJDB503	174854	Proteobacteria	Alphaproteobacteria	3.63139	61.5	-	BANI01	596	3470	3161	3/20/15	4/10/17	Scaffold	Kinki University	SAMD00036644	GCA_000964485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/485/GCA_000964485.1_ASM96448v1	-	NBRC 3261
Cutibacterium avidum	33010	PRJNA323590	323590	Terrabacteria group	Actinobacteria	2.66729	63.4	-	LYSN01	51	2503	2304	7/22/16	4/5/17	Contig	UC Davis	SAMN05181546	GCA_001692965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/965/GCA_001692965.1_ASM169296v1	-	UCD-PD2
Streptococcus sobrinus TCI-28	1074055	PRJNA71879	71879	Terrabacteria group	Firmicutes	2.12935	43.5	-	AGGE01	684	2108	1849	10/6/11	3/30/17	Contig	JCVI	SAMN02436616	GCA_000227845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/845/GCA_000227845.2_SMUT1-NEX_4-28	-	TCI-28
Morganella morganii SC01	1239989	PRJNA175933	175933	Proteobacteria	Gammaproteobacteria	4.15041	50.8	-	AMWL02	63	4047	3898	10/22/12	5/19/17	Contig	IMTECH	SAMN01822804	GCA_000307755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/755/GCA_000307755.2_ASM30775v2	23405333	SC01
Acidithiobacillus thiooxidans	930	PRJNA319324	319324	Proteobacteria	Acidithiobacillia	3.94694	52.9	-	LWSC01	335	4225	3824	8/16/16	4/5/17	Contig	Central South University	SAMN04884947	GCA_001705695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/695/GCA_001705695.1_ASM170569v1	27548157	GD1-3
Pediococcus damnosus LMG 28219	1448143	PRJNA234374	234374	Terrabacteria group	Firmicutes	2.23122	38.2	-	JANK01	183	2143	2023	3/25/15	4/3/17	Contig	Ghent University	SAMN02592738	GCA_000962875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/875/GCA_000962875.1_ASM96287v1	25880122	LMG 28219
Agrobacterium rhizogenes	359	PRJNA240998	240998	Proteobacteria	Alphaproteobacteria	7.06462	60	-	JFZP01	42	6743	6536	6/12/14	4/4/17	Contig	UC Davis	SAMN02687897	GCA_000705135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/135/GCA_000705135.2_Draft_genome_assembly_of_Agrobacterium_rhizogenes_ATCC15834	25359916	ATCC 15834
Staphylococcus sciuri	1296	PRJNA278197	278197	Terrabacteria group	Firmicutes	2.89042	32.4	-	LDTQ01	72	2914	2814	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401361	GCA_001476585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/585/GCA_001476585.1_ASM147658v1	26793183	RSA37
Lactobacillus curvatus	28038	PRJEB20186	384337	Terrabacteria group	Firmicutes	1.90168	41.7018	chromosome LCUFL03:NZ_LT841333.1/LT841333.1; plasmid pLCUFL03:NZ_LT841332.1/LT841332.1	FXDK01	2	3930	3719	4/28/17	5/6/17	Chromosome	INRA	SAMEA103975583	GCA_900178545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/545/GCA_900178545.1_AS-FLEC03-V1	-	-
Selenomonas ruminantium	971	PRJEB16298	348888	Terrabacteria group	Firmicutes	3.21142	50.9	-	FNJQ01	71	3091	2910	10/20/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216366	GCA_900104055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/055/GCA_900104055.1_IMG-taxon_2623620517_annotated_assembly	-	S137
Hafnia alvei	569	PRJNA236111	236111	Proteobacteria	Gammaproteobacteria	4.47394	48.6	-	JTET01	61	4118	3939	1/5/15	4/2/17	Contig	University of Malaya	SAMN03178186	GCA_000818795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/795/GCA_000818795.1_ASM81879v1	-	DSM 30098
Enterococcus hirae	1354	PRJNA245485	245485	Terrabacteria group	Firmicutes	2.80231	36.8	-	JMIG01	22	2562	2424	6/9/14	4/2/17	Scaffold	Norwegian University of Life Sciences	SAMN02738239	GCA_000699565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/565/GCA_000699565.1_INF_E1_1.0	25035319	INF E1
Acetobacter tropicalis	104102	PRJNA253128	253128	Proteobacteria	Alphaproteobacteria	3.8387	55.3	-	JOMM01	183	3424	3195	5/19/17	5/24/17	Contig	Cornell University	SAMN02866222	GCA_002153795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/795/GCA_002153795.1_ASM215379v1	-	DmW_042
Methanolacinia petrolearia DSM 11571	679926	PRJNA40773	40773	Euryarchaeota	Methanomicrobia	2.84329	47.4	chromosome:NC_014507.1/CP002117.1	-	1	2870	2777	9/17/10	9/3/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00017400	GCA_000147875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/875/GCA_000147875.1_ASM14787v1	21304750	-
Vibrio nigripulchritudo ATCC 27043	1051649	PRJNA68627	68627	Proteobacteria	Gammaproteobacteria	6.11358	45.8	-	AFWJ01	332	5737	5368	8/4/11	5/19/17	Contig	Food and Drug Administration	SAMN02951906	GCA_000222685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/685/GCA_000222685.2_ASM22268v1	21930677	ATCC 27043
Mycobacterium canettii CIPT 140070002	1246119	PRJEB584	184398	Terrabacteria group	Actinobacteria	4.30898	65.4	-	CAOL01	587	4297	3906	12/19/12	5/19/17	Contig	Institut Pasteur	SAMEA2271920	GCA_000343875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/875/GCA_000343875.1_ASM34387v1	23291586	CIPT 140070002
Pantoea agglomerans	549	PRJNA254768	254768	Proteobacteria	Gammaproteobacteria	4.73383	55.2	-	JPKQ01	16	4468	4274	9/23/14	4/2/17	Scaffold	Forestry and Agricultural Biotechnology Institute	SAMN02905153	GCA_000757415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/415/GCA_000757415.1_MP2assem4	26937267	MP2
Mycobacterium africanum	33894	PRJNA240161	240161	Terrabacteria group	Actinobacteria	4.3897	65.6	-	JKXO01	3	4247	4041	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02673328	GCA_000666125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/125/GCA_000666125.1_Myco_afri_MAL020148_V1	-	MAL020148
Mycobacterium colombiense	339268	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.54578	67.5	-	LZKI01	197	5231	4927	6/17/16	4/5/17	Contig	JCVI	SAMN04634246	GCA_001672755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/755/GCA_001672755.1_ASM167275v1	-	E1334
Lactobacillus kefiranofaciens	267818	PRJEB16188	348930	Terrabacteria group	Firmicutes	2.28195	37.2	-	FMXC01	84	2329	1973	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02983011	GCA_900103655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/655/GCA_900103655.1_IMG-taxon_2597490363_annotated_assembly	-	ATCC 43761
Melissococcus plutonius	33970	PRJNA263539	263539	Terrabacteria group	Firmicutes	2.02134	31.1	-	JSAX01	10	1773	1561	7/7/15	4/3/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03103706	GCA_001047435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/435/GCA_001047435.1_ASM104743v1	-	765-6B
Haemophilus haemolyticus	726	PRJNA282677	282677	Proteobacteria	Gammaproteobacteria	1.8697	38.5	-	LCTI01	63	1886	1740	5/15/15	4/3/17	Contig	University of Iowa	SAMN03573808	GCA_001008215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/215/GCA_001008215.1_ASM100821v1	-	1P26
Gallibacterium anatis	750	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.35941	40.1	-	JPXR01	78	2253	2121	11/4/14	4/2/17	Contig	University of Copenhagen	SAMN02900756	GCA_000771795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/795/GCA_000771795.1_ASM77179v1	-	Gerl.3348/80
Photobacterium leiognathi	553611	PRJNA302718	302718	Proteobacteria	Gammaproteobacteria	4.62922	41	-	LNRC01	90	4184	3998	2/10/16	4/4/17	Contig	University of Cambridge	SAMN04279315	GCA_001557755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/755/GCA_001557755.1_ASM155775v1	-	CUB1
Leptospira licerasiae	447106	PRJNA374022	374022	Spirochaetes	Spirochaetia	4.306	39.2	-	NFUP01	29	4086	3992	5/19/17	5/24/17	Contig	Venezuelan Scientific Research Institute	SAMN06892343	GCA_002150055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/055/GCA_002150055.1_ASM215005v1	-	CLM-R50
Pseudomonas brassicacearum 51MFCVI2.1	1050347	PRJNA79071	79071	Proteobacteria	Gammaproteobacteria	6.56887	61	-	AZOC01	49	5980	5807	12/17/13	4/2/17	Scaffold	JGI	SAMN02597182	GCA_000510785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/510/785/GCA_000510785.1_ASM51078v1	-	51MFCVI2.1
Leptospira noguchii str. 2001034031	1193053	PRJNA167228	167228	Spirochaetes	Spirochaetia	4.9388	35.7	-	AKXB02	175	4651	3947	10/17/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436392	GCA_000306195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/195/GCA_000306195.2_gls454024v02	-	2001034031
Leptospira weilii str. UI 13098	1088542	PRJNA74123	74123	Spirochaetes	Spirochaetia	4.55408	40.7	-	AHNU02	89	4602	4204	1/24/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436583	GCA_000244355.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/355/GCA_000244355.3_LweiUI13098v0.2	-	UI 13098
Mycobacterium abscessus subsp. bolletii	319705	PRJNA323571	323571	Terrabacteria group	Actinobacteria	5.04355	64.1	-	MAFO01	45	5015	4854	3/3/17	3/6/17	Contig	LNCC	SAMN05186795	GCA_002013835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/835/GCA_002013835.1_ASM201383v1	-	BD
Burkholderia gladioli	28095	PRJNA260296	260296	Proteobacteria	Betaproteobacteria	8.52713	67.8	-	JRGO01	109	7566	7244	9/24/14	4/2/17	Scaffold	UC Davis	SAMN03019910	GCA_000757585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/585/GCA_000757585.1_ASM75758v1	25614570	UCD-UG_CHAPALOTE
Aeromonas veronii AMC34	1073383	PRJNA71515	71515	Proteobacteria	Gammaproteobacteria	4.57873	58.4	-	AGWU01	1	4194	4055	9/17/12	5/18/17	Scaffold	Broad Institute	SAMN02463949	GCA_000298015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/015/GCA_000298015.1_Aero_vero_AMC34_V1	-	AMC34
Chlamydia pecorum IPTaLE	1427368	PRJNA229197	229197	PVC group	Chlamydiae	1.10603	41.1504	chromosome:NZ_CM002309.1/CM002309.1	AZBE01	1	1996	1892	12/12/13	4/2/17	Chromosome	Queensland University of Technology	SAMN02470824	GCA_000508025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/025/GCA_000508025.1_CpecIPTaLE1.0	25106440	IPTaLE
Microbacterium testaceum	2033	PRJNA278183	278183	Terrabacteria group	Actinobacteria	3.8811	69.9	-	LDRS01	300	3585	3388	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401347	GCA_001477115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/115/GCA_001477115.1_ASM147711v1	26793183	NS206
Desulfitobacterium hafniense Y51	138119	PRJNA16639	16639	Terrabacteria group	Firmicutes	5.72753	47.4	chromosome:NC_007907.1/AP008230.1	-	1	5484	5227	3/10/06	3/29/17	Complete Genome	Research Institute of Innovative Technology for the Earth (RITE)	SAMD00061082	GCA_000010045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/045/GCA_000010045.1_ASM1004v1	16513756	Y51
Xanthomonas gardneri	90270	PRJNA276594	276594	Proteobacteria	Gammaproteobacteria	5.30862	63.5	-	JZJX01	300	4670	4316	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03378957	GCA_001009315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/315/GCA_001009315.1_ASM100931v1	26089818	SM413-11
Acidithiobacillus ferrivorans	160808	PRJNA379596	379596	Proteobacteria	Acidithiobacillia	2.6988	59	-	NCBC01	1021	3208	2909	8/16/17	8/16/17	Scaffold	None	SAMN06622434	GCA_002255305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/305/GCA_002255305.1_ASM225530v1	-	-
Staphylococcus pseudintermedius E140	1266717	PRJNA182979	182979	Terrabacteria group	Firmicutes	2.76946	37.4	chromosome:NZ_ANOI01000001.1/ANOI01000001.1	ANOI01	1	2750	2580	1/9/13	4/10/17	Chromosome	University of Copenhagen	SAMN02471704	GCA_000478385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/385/GCA_000478385.1_MRSP_E140_v1.0	23516230	E140
Leuconostoc pseudomesenteroides	33968	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.98015	39.1	-	MPHT01	85	2066	1824	3/27/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981489	GCA_002072555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/555/GCA_002072555.1_ASM207255v1	28217118	LMGH280
Synechocystis sp. PCC 6803	1148	PRJNA60	60	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.94702	47.3493	chromosome:NC_000911.1/BA000022.2; plasmid pSYSA:NC_005230.1/AP004311.1; plasmid pSYSG:NC_005231.1/AP004312.1; plasmid pSYSM:NC_005229.1/AP004310.1; plasmid pSYSX:NC_005232.1/AP006585.1	-	5	3719	3584	7/27/01	3/29/17	Complete Genome	Kazusa	SAMD00061113	GCA_000009725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/725/GCA_000009725.1_ASM972v1	"85,902,798,905,231"	PCC 6803
Streptobacillus moniliformis	34105	PRJNA319313	319313	Fusobacteria	Fusobacteriia	1.60428	26.2	-	LWTI01	151	1472	1361	6/4/16	4/5/17	Contig	Robert Koch Institute	SAMN04892875	GCA_001657855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/855/GCA_001657855.1_ASM165785v1	-	VA11257/2007
Aeromonas caviae	648	PRJNA292995	292995	Proteobacteria	Gammaproteobacteria	4.70059	61	-	LIIX01	4	4404	4102	8/19/15	4/4/17	Contig	Centro de Biotecnologia Genomica	SAMN03995874	GCA_001270765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/765/GCA_001270765.1_ASM127076v1	26494682	429865
Lactobacillus coryniformis subsp. coryniformis	115541	PRJNA304089	304089	Terrabacteria group	Firmicutes	2.82918	42.9	-	LNUL01	133	2862	1980	9/22/16	4/13/17	Contig	Centro de Referencia para Lactobacilos (CERELA-CONICET)	SAMN04295023	GCA_001742375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/375/GCA_001742375.1_ASM174237v1	-	CRL 1001
Xanthomonas vesicatoria	56460	PRJNA266916	266916	Proteobacteria	Gammaproteobacteria	5.12151	64.3	-	JTEF01	420	4661	4116	12/18/15	4/5/17	Contig	Institut de Recherche pour le Developpement	SAMN03175433	GCA_001469445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/445/GCA_001469445.1_XV_LMG919_E1.0	-	LMG 919
Xanthomonas perforans	442694	PRJNA276613	276613	Proteobacteria	Gammaproteobacteria	5.17117	64.8	-	JZVE01	78	4685	4357	5/18/15	4/3/17	Contig	Universidade de Sao Paulo	SAMN03378978	GCA_001009405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/405/GCA_001009405.1_v1	26089818	Xp10-13
Weissella cibaria KACC 11862	911104	PRJNA59737	59737	Terrabacteria group	Firmicutes	2.31786	45.1	-	AEKT01	72	2154	2047	11/5/10	3/30/17	Contig	Korea Research Institute of Bioscience and Biotechnology	SAMN02470197	GCA_000193635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/635/GCA_000193635.2_ASM19363v1	21097615	KACC 11862
Streptococcus vestibularis	1343	PRJNA320256	320256	Terrabacteria group	Firmicutes	1.62448	39.5	-	LXZV01	563	-	-	6/4/16	6/4/16	Contig	State University of Campinas	SAMN04931571	GCA_001657925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/925/GCA_001657925.1_ASM165792v1	-	22-03 S4
Synechocystis sp. PCC 6803	1148	PRJNA80481	80481	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.94931	47.3461	chromosome:NC_020286.1/CP003265.1; plasmid pCA2.4_M:NC_020289.1/CP003270.1; plasmid pCB2.4_M:NC_020298.1/CP003271.1; plasmid pCC5.2_M:NC_020290.1/CP003272.1; plasmid pSYSA_M:NC_020287.1/CP003267.1; plasmid pSYSG_M:NC_020288.1/CP003268.1; plasmid pSYSM_M:NC_020296.1/CP003266.1; plasmid pSYSX_M:NC_020297.1/CP003269.1	-	8	3726	3594	2/19/13	4/1/17	Complete Genome	"Institute of Biology 3, Faculty of Biology, Albert-Ludwigs-University Freiburg"	SAMN02603388	GCA_000340785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/785/GCA_000340785.1_ASM34078v1	23069868	PCC 6803
Streptococcus cristatus	45634	PRJNA274768	274768	Terrabacteria group	Firmicutes	1.9985	42.6	-	JYGK01	5	1988	1872	3/23/15	4/3/17	Contig	University at Buffalo	SAMN03334894	GCA_000959895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/895/GCA_000959895.1_ASM95989v1	25999552	CR3
Streptococcus pseudopneumoniae 5247	1415761	PRJNA225872	225872	Terrabacteria group	Firmicutes	2.12233	39.8	-	AYRQ01	122	2268	1957	12/11/13	4/2/17	Contig	"Research Institute of Physical-Chemical Medicine, Moscow, Russia"	SAMN02470842	GCA_000506745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/745/GCA_000506745.1_Spspn.str5247_v1.0	-	5247
Kingella kingae AA255	1305788	PRJEB1640	194488	Proteobacteria	Betaproteobacteria	1.99256	46.7	-	CBQX01	1	2009	1701	8/14/13	4/2/17	Scaffold	URMITE	SAMEA2272731	GCA_000469825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/825/GCA_000469825.1_AA255	-	AA255
Leuconostoc lactis	1246	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.72466	42.9	-	MPLN01	48	1785	1599	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981502	GCA_002092695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/695/GCA_002092695.1_ASM209269v1	28217118	LN24
Streptococcus parauberis	1348	PRJDB1720	245402	Terrabacteria group	Firmicutes	1.95884	35.4	-	BAWT01	33	1957	1845	4/24/14	4/2/17	Contig	Kochi University	SAMD00000349	GCA_000691825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/825/GCA_000691825.1_ASM69182v1	24855302	SK-417
Sphingobium yanoikuyae	13690	PRJNA316001	316001	Proteobacteria	Alphaproteobacteria	5.90169	64	-	LVJD01	444	5713	5342	9/7/16	4/5/17	Contig	CSIRO	SAMN04572948	GCA_001721245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/245/GCA_001721245.1_ASM172124v1	27590809	B2
Myroides odoratimimus CCUG 12700	883151	PRJNA52191	52191	FCB group	Bacteroidetes/Chlorobi group	4.04095	34.3	-	AGZL01	7	3581	3423	6/21/13	4/10/17	Scaffold	Broad Institute	SAMN02596777	GCA_000413415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/415/GCA_000413415.1_Myro_odor_CCUG_12700_V1	-	CCUG 12700
Staphylococcus simulans	1286	PRJNA294936	294936	Terrabacteria group	Firmicutes	2.67111	36.1	-	LJSL01	112	2625	2491	11/6/15	4/11/17	Contig	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN04038441	GCA_001439855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/855/GCA_001439855.1_ASM143985v1	27313298	CJ16
Mycoplasma hominis	2098	PRJNA258573	258573	Terrabacteria group	Tenericutes	0.72983	27	-	JRHF01	20	631	575	9/29/14	4/2/17	Contig	Federal Budget Institution of Science Central Research Institute for Epidemiology	SAMN03000724	GCA_000759375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/375/GCA_000759375.1_ASM75937v1	-	TOA
Sinorhizobium fredii CCBAU 05557	1128329	PRJNA77219	77219	Proteobacteria	Alphaproteobacteria	6.5877	62.3	-	AJQM01	382	6557	5989	5/3/12	5/19/17	Contig	China Agricultural University	SAMN02469489	GCA_000261845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/845/GCA_000261845.1_05557	22586130	CCBAU 05557
Dehalococcoides mccartyi	61435	PRJNA376155	376155	Terrabacteria group	Chloroflexi	1.38891	47.3	chromosome:NZ_CP019999.1/CP019999.1	-	1	1502	1441	3/15/17	3/17/17	Complete Genome	University of Toronto	SAMN06350838	GCA_002028285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/285/GCA_002028285.1_ASM202828v1	-	KBTCE1
Dehalococcoides mccartyi	61435	PRJNA376155	376155	Terrabacteria group	Chloroflexi	1.3599	47.3	chromosome:NZ_CP019968.1/CP019968.1	-	1	1456	1393	3/9/17	3/11/17	Complete Genome	University of Toronto	SAMN06350849	GCA_002024225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/225/GCA_002024225.1_ASM202422v1	-	KBVC1
Actinomyces oris	544580	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.04644	68.7	-	MSKK01	87	2569	2376	1/5/17	4/6/17	Scaffold	King's College London	SAMN05898732	GCA_001937365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/365/GCA_001937365.1_ASM193736v1	-	R21091
Streptococcus infantis	68892	PRJNA274768	274768	Terrabacteria group	Firmicutes	1.79199	39.2	-	JYGT01	11	1877	1745	3/23/15	4/3/17	Contig	University at Buffalo	SAMN03334903	GCA_000960085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/085/GCA_000960085.1_ASM96008v1	25999552	UC921A
Haemophilus parainfluenzae	729	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.96852	39.4	-	JVSB01	61	1920	1821	7/10/15	4/3/17	Contig	University of Washington	SAMN03197345	GCA_001054475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/475/GCA_001054475.1_ASM105447v1	26230489	155_HPAR
Agrobacterium sp. R89-1	1763560	PRJNA304336	304336	Proteobacteria	Alphaproteobacteria	4.75041	56.2	-	LNUW01	30	4496	4340	2/17/16	4/11/17	Scaffold	Institute of Biotechnology CAS	SAMN04299201	GCA_001562555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/555/GCA_001562555.1_ASM156255v1	27056219	R89-1
Capnocytophaga canimorsus	28188	PRJEB8040	270923	FCB group	Bacteroidetes/Chlorobi group	2.38363	36.2	-	CDOE01	81	2196	1655	1/20/15	4/10/17	Contig	"BIOZENTRUM, UNIVERSITY OF BASEL"	SAMEA3180119	GCA_000827635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/827/635/GCA_000827635.1_Cc12.1	-	Cc12
Prevotella denticola	28129	PRJNA267549	267549	FCB group	Bacteroidetes/Chlorobi group	2.59905	50.1	-	JVYU01	3171	-	-	7/10/15	7/13/16	Scaffold	University of Washington	SAMN03197170	GCA_001062325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/325/GCA_001062325.1_ASM106232v1	26230489	1208_PDEN
Streptococcus parasanguinis SK236	1035185	PRJNA67179	67179	Terrabacteria group	Firmicutes	1.98869	42.1	-	AFUC01	18	1970	1815	8/4/11	3/30/17	Contig	J. Craig Venter Institute	SAMN00621706	GCA_000222725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/725/GCA_000222725.2_ASM22272v2	-	SK236
Fusobacterium necrophorum DJ-1	1441733	PRJNA232678	232678	Fusobacteria	Fusobacteriia	2.45994	34	-	JAAD01	370	2336	2078	5/15/14	4/2/17	Contig	"Newport Laboratories, A Sanofi company"	SAMN02781281	GCA_000691665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/665/GCA_000691665.1_FnecDJ-1v1.0	-	DJ-1
[Clostridium] clostridioforme 90A6	999406	PRJNA64863	64863	Terrabacteria group	Firmicutes	6.03391	48.7	-	AGYL01	22	6006	5639	4/19/13	5/19/17	Scaffold	Broad Institute	SAMN02596762	GCA_000371545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/545/GCA_000371545.1_Clos_clos_90A6_V1	-	90A6
Brevundimonas diminuta	293	PRJNA280891	280891	Proteobacteria	Alphaproteobacteria	3.18032	67.4	-	LBNT01	31	3129	3028	5/5/15	8/27/17	Scaffold	Xcelris labs Ltd	SAMN03480409	GCA_000988015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/015/GCA_000988015.1_ASM98801v1	26112790	XGC1
Oblitimonas alkaliphila	1697053	PRJNA291610	291610	Proteobacteria	Gammaproteobacteria	2.40055	47.3	chromosome:CP012361.1	-	1	2321	2173	8/13/15	12/24/15	Complete Genome	CDC	SAMN03946327	GCA_001267235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/235/GCA_001267235.1_ASM126723v1	-	D2441
Leptospira santarosai str. 200702252	1049977	PRJNA74137	74137	Spirochaetes	Spirochaetia	4.03163	41.9	-	AHOA02	39	4030	3704	1/24/12	4/1/17	Contig	J. Craig Venter Institute	SAMN02436584	GCA_000244475.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/475/GCA_000244475.3_gls454120v02	-	200702252
Prevotella bryantii	77095	PRJEB16644	349928	FCB group	Bacteroidetes/Chlorobi group	3.33497	38.7	-	FNQQ01	21	2724	2588	10/22/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216455	GCA_900107655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/655/GCA_900107655.1_IMG-taxon_2654588113_annotated_assembly	-	KHPX14
Pontibacter korlensis	400092	PRJNA263316	263316	FCB group	Bacteroidetes/Chlorobi group	5.46254	47.3	chromosome:NZ_CP009621.1/CP009621.1	-	1	4677	4494	4/20/15	4/17/17	Complete Genome	BGI	SAMN03098875	GCA_000973725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/725/GCA_000973725.1_ASM97372v1	26057562	X14-1T
Mycoplasma ovipneumoniae	29562	PRJNA253509	253509	Terrabacteria group	Tenericutes	1.00792	29.2	-	JOTJ01	78	762	659	8/26/16	4/5/17	Scaffold	Southwest University for Nationalities	SAMN02870887	GCA_001715095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/095/GCA_001715095.1_ASM171509v1	-	TC7
Streptococcus gallolyticus subsp. gallolyticus TX20005	545774	PRJNA30645	30645	Terrabacteria group	Firmicutes	2.24697	37.7	-	AEEM01	6	2195	2130	8/24/10	3/30/17	Scaffold	Baylor College of Medicine	SAMN00000310	GCA_000146525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/146/525/GCA_000146525.1_ASM14652v1	-	TX20005
Komagataeibacter hansenii	436	PRJNA343805	343805	Proteobacteria	Alphaproteobacteria	3.59242	59.4	-	MJMD01	153	3254	3092	1/6/17	4/6/17	Scaffold	University of Texas at Austin	SAMN05801622	GCA_001938755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/755/GCA_001938755.1_ASM193875v1	-	LMG 23726
Lysinibacillus fusiformis	28031	PRJNA259505	259505	Terrabacteria group	Firmicutes	4.70921	37.4	-	JRBA01	22	4681	4507	9/16/14	4/9/17	Contig	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN03014286	GCA_000755455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/455/GCA_000755455.1_ASM75545v1	25883291	SW-B9
Pantoea vagans	470934	PRJNA369420	369420	Proteobacteria	Gammaproteobacteria	4.79516	55	-	MUJJ01	45	4522	4316	4/10/17	4/13/17	Contig	University of Neuchatel	SAMN06285540	GCA_002082355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/355/GCA_002082355.1_ASM208235v1	-	Pa
Amycolatopsis mediterranei	33910	PRJNA244722	244722	Terrabacteria group	Actinobacteria	10.2862	71.3	-	JMQG01	104	9651	9408	6/10/14	4/2/17	Contig	University of Delhi	SAMN02746080	GCA_000700945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/945/GCA_000700945.1_ASM70094v1	25125653	DSM 46096
Helicobacter suis HS1	710393	PRJEB15618	356152	Proteobacteria	delta/epsilon subdivisions	1.61635	40	-	FMST01	78	1674	1527	12/4/16	4/6/17	Scaffold	GHENT UNIVERSITY	SAMEA4476653	GCA_900099085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/085/GCA_900099085.1_HS1_output_strain3	-	-
Acinetobacter haemolyticus TG19599	1221297	PRJNA172708	172708	Proteobacteria	Gammaproteobacteria	3.38644	39.5	-	AMJA01	261	3182	3064	10/2/12	3/30/17	Contig	Translational Genomics Research Institute	SAMN02471267	GCA_000302315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/315/GCA_000302315.1_ASM30231v1	-	TG19599
Yersinia enterocolitica (type O:5) str. YE53/03	1262462	PRJEB661	194499	Proteobacteria	Gammaproteobacteria	4.9402	47.3	chromosome:NZ_HF571988.1/HF571988.1	-	1	4676	4442	1/6/14	3/26/17	Complete Genome	WTSI	SAMEA4532339	GCA_000968115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/115/GCA_000968115.1_ASM96811v1	-	YE53/03
Dehalococcoides mccartyi BTF08	1193806	PRJNA167310	167310	Terrabacteria group	Chloroflexi	1.45233	47.3	chromosome:NC_020387.1/CP004080.1	-	1	1556	1485	2/22/13	4/1/17	Complete Genome	Friedrich-Schiller-University of Jena	SAMN02603238	GCA_000341695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/695/GCA_000341695.1_ASM34169v1	23600617	BTF08
Bacillus coagulans 2-6	941639	PRJNA61501	61501	Terrabacteria group	Firmicutes	3.07308	47.3	chromosome:NC_015634.1/CP002472.1	-	1	3109	2862	6/10/11	4/10/17	Complete Genome	Shanghai Jiao Tonny University	SAMN02603866	GCA_000217835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/835/GCA_000217835.1_ASM21783v1	21705584	6-Feb
Streptococcus constellatus subsp. pharyngis SK1060 = CCUG 46377	1035184	PRJDB79	219079	Terrabacteria group	Firmicutes	1.95057	37.9	-	BASX01	66	1979	1774	9/7/13	4/11/17	Contig	"Pediatric Dentistry, Tokyo Dental College"	SAMD00036762	GCA_000474135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/135/GCA_000474135.1_ASM47413v1	-	CCUG 46377
Dehalococcoides mccartyi GT	633145	PRJNA36645	36645	Terrabacteria group	Chloroflexi	1.36015	47.3	chromosome:NC_013890.1/CP001924.1	-	1	1468	1399	2/17/10	9/3/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598511	GCA_000025585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/585/GCA_000025585.1_ASM2558v1	-	GT
Lactobacillus amylovorus	1604	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.3564	37.8	-	DBPI01	122	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450714	GCA_002300105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/105/GCA_002300105.1_ASM230010v1	28894102	-
Dehalococcoides mccartyi VS	311424	PRJNA18811	18811	Terrabacteria group	Chloroflexi	1.41346	47.3	chromosome:NC_013552.1/CP001827.1	-	1	1505	1432	12/3/09	9/4/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598415	GCA_000025025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/025/GCA_000025025.1_ASM2502v1	19893622	VS
Mesorhizobium ciceri CMG6	1040980	PRJNA182744	182744	Proteobacteria	Alphaproteobacteria	6.91019	62.5	-	AWZS01	90	6771	6406	9/30/13	4/9/17	Contig	DOE Joint Genome Institute	SAMN02440789	GCA_000472365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/365/GCA_000472365.1_ASM47236v1	-	CMG6
Bacillus cytotoxicus	580165	PRJNA394959	394959	Terrabacteria group	Firmicutes	4.30355	35.9	-	NOKH01	2	4489	4024	8/14/17	8/16/17	Contig	University of Zurich	SAMN07367958	GCA_002250965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/965/GCA_002250965.1_ASM225096v1	-	CH_4
Cupriavidus necator	106590	PRJNA316636	316636	Proteobacteria	Betaproteobacteria	7.26781	66.3	-	LVWN01	118	6751	6456	10/25/16	4/5/17	Contig	Nagaoka University of Technology	SAMN04112262	GCA_001853325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/325/GCA_001853325.1_ASM185332v1	-	PHE3-6
Veillonella parvula ACS-068-V-Sch12	768727	PRJNA49441	49441	Terrabacteria group	Firmicutes	2.15214	38.5	-	AEXI01	23	1971	1896	5/25/11	3/30/17	Contig	J. Craig Venter Institute	SAMN00138208	GCA_000215025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/025/GCA_000215025.2_ASM21502v2	-	ACS-068-V-Sch12
Acinetobacter pittii ANC 3678	1217673	PRJNA183268	183268	Proteobacteria	Gammaproteobacteria	3.95983	38.9	-	APQN01	10	3838	3652	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN01828156	GCA_000369025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/025/GCA_000369025.1_Acin_pitt_ANC_3678_V1	-	ANC 3678
Xanthomonas euvesicatoria	456327	PRJNA275501	275501	Proteobacteria	Gammaproteobacteria	5.37719	64.5	-	JZRQ01	148	4856	4438	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03349339	GCA_001009125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/125/GCA_001009125.1_ASM100912v1	-	684
Pseudomonas amygdali pv. lachrymans str. M301315	629260	PRJNA33205	33205	Proteobacteria	Gammaproteobacteria	6.80185	57.432	plasmid pMPPla107:NZ_CM000959.1/CM000959.1	AEAF01	372	6569	6139	7/8/10	5/19/17	Scaffold	University of North Carolina at Chapel Hill	SAMN02471323	GCA_000146005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/146/005/GCA_000146005.1_ASM14600v1	21799664	M301315
Brucella sp. F5/99	437701	PRJNA33767	33767	Proteobacteria	Alphaproteobacteria	3.33672	57.1	-	ACFF01	18	3311	3118	3/31/09	4/17/17	Scaffold	Broad Institute	SAMN02595303	GCA_000158995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/995/GCA_000158995.1_ASM15899v1	-	F5/99
Enterobacter asburiae	61645	PRJNA324524	324524	Proteobacteria	Gammaproteobacteria	4.65046	55.7	-	LYYC01	29	4509	4342	6/16/16	4/5/17	Scaffold	CSIR-National Environmental Engineering Research Institute (NEERI)	SAMN05207407	GCA_001663525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/525/GCA_001663525.1_ASM166352v1	-	EGD_AQ_BF12
Parageobacillus thermoglucosidasius NBRC 107763	1223501	PRJDB427	173146	Terrabacteria group	Firmicutes	3.87116	43.7	-	BAWP01	68	3956	3674	4/12/14	4/2/17	Contig	National Institute of Technology and Evaluation	SAMD00000343	GCA_000648295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/295/GCA_000648295.1_ASM64829v1	-	NBRC 107763
Vibrio coralliilyticus ATCC BAA-450	675814	PRJNA40491	40491	Proteobacteria	Gammaproteobacteria	5.68063	45.7	-	ACZN01	20	5250	5035	10/6/09	5/19/17	Contig	"Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR)"	SAMN02393819	GCA_000176135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/135/GCA_000176135.1_ASM17613v1	22158392	ATCC BAA-450
Vibrio mimicus MB451	675806	PRJNA40509	40509	Proteobacteria	Gammaproteobacteria	4.31345	46.4	-	ADAF01	3	4116	3902	10/23/09	5/19/17	Contig	"Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR)"	SAMN02393827	GCA_000176375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/375/GCA_000176375.1_ASM17637v1	21078967	MB-451
Brevibacillus brevis NBRC 100599	358681	PRJDA29147	29147	Terrabacteria group	Firmicutes	6.29644	47.3	chromosome:NC_012491.1/AP008955.1	-	1	6055	5760	4/1/09	4/7/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00060942	GCA_000010165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/165/GCA_000010165.1_ASM1016v1	-	NBRC 100599 (= 47)
Pediococcus acidilactici DSM 20284	862514	PRJNA50527	50527	Terrabacteria group	Firmicutes	1.94283	42.2	-	AEEG01	4	1883	1789	8/20/10	3/30/17	Scaffold	Baylor College of Medicine	SAMN00116807	GCA_000146325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/146/325/GCA_000146325.1_ASM14632v1	-	DSM 20284
Vibrio cholerae MJ-1236	593588	PRJNA33555	33555	Proteobacteria	Gammaproteobacteria	4.23637	47.2948	chromosome 1:NC_012668.1/CP001485.1; chromosome 2:NC_012667.1/CP001486.1	-	2	4063	3877	5/4/09	5/19/17	Complete Genome	"Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR)"	SAMN02603569	GCA_000022585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/585/GCA_000022585.1_ASM2258v1	-	MJ-1236
Cylindrospermopsis raciborskii CENA302	1170768	PRJNA323576	323576	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.47642	40.1	-	MTPU01	58	3183	3008	3/14/17	3/16/17	Contig	CENA/USP	SAMN05181448	GCA_002027345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/345/GCA_002027345.1_ASM202734v1	-	CENA302
Cronobacter turicensis 564	1208590	PRJEB159	181118	Proteobacteria	Gammaproteobacteria	4.56776	57.2	-	CALB01	114	4639	3724	11/15/12	5/18/17	Scaffold	LifeTech	SAMEA2272584	GCA_000319515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/515/GCA_000319515.1_ASM31951v1	23166675	564
Pantoea stewartii	66269	PRJNA265925	265925	Proteobacteria	Gammaproteobacteria	4.81761	53.9	-	JSXF01	39	4516	4347	12/17/14	4/2/17	Contig	University of Malaya	SAMN03154073	GCA_000803205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/205/GCA_000803205.1_ASM80320v1	25700398	M073a
Vibrio fluvialis	676	PRJNA273365	273365	Proteobacteria	Gammaproteobacteria	4.84996	49.9	-	JXXQ01	207	4600	4363	2/23/15	4/3/17	Contig	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN03290994	GCA_000931495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/495/GCA_000931495.1_ASM93149v1	-	3663
Acinetobacter lwoffii ATCC 9957 = CIP 70.31	1311804	PRJNA183262	183262	Proteobacteria	Gammaproteobacteria	3.67768	43	-	APQT01	12	3533	3203	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN01087832	GCA_000369125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/125/GCA_000369125.1_Acin_lwof_CIP_70_31_V1	-	CIP 70.31
Pseudoalteromonas sp. 6BO_GOM-1096m	1380359	PRJNA213796	213796	Proteobacteria	Gammaproteobacteria	4.06565	40.2	-	JIAM01	27	3687	3574	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743961	GCA_000620745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/745/GCA_000620745.1_ASM62074v1	-	6BO_GOM-1096m
Acinetobacter junii TG19608	1221306	PRJNA172713	172713	Proteobacteria	Gammaproteobacteria	3.2575	38.7	-	AMJF01	136	3103	2919	10/2/12	3/30/17	Contig	Translational Genomics Research Institute	SAMN02471273	GCA_000302355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/355/GCA_000302355.1_ASM30235v1	-	TG19608
Acinetobacter johnsonii TG19625	1221301	PRJNA172712	172712	Proteobacteria	Gammaproteobacteria	3.59947	41.3	-	AMJE01	111	3580	3360	10/2/12	3/30/17	Contig	Translational Genomics Research Institute	SAMN02471255	GCA_000302335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/335/GCA_000302335.1_ASM30233v1	-	TG19625
Acinetobacter calcoaceticus ANC 3680	1217653	PRJNA183275	183275	Proteobacteria	Gammaproteobacteria	4.07494	38.8	-	APQH01	4	3959	3770	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN01828160	GCA_000368945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/945/GCA_000368945.1_Acin_calc_ANC_3680_V1	-	ANC 3680
Pseudomonas coronafaciens pv. porri	83964	PRJNA266479	266479	Proteobacteria	Gammaproteobacteria	6.00653	57.5	-	JTHM01	274	5667	5295	8/31/15	4/4/17	Contig	Institute for Agricultural and Fisheries Research (ILVO)	SAMN03165364	GCA_001275725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/725/GCA_001275725.1_ASM127572v1	-	LMG 28495
Pseudomonas savastanoi pv. phaseolicola	319	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.96739	57.9	-	LJQZ01	287	5615	5107	10/20/15	4/4/17	Scaffold	University of Toronto	SAMN03976265	GCA_001400605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/605/GCA_001400605.1_PphICMP2740	-	ICMP2740
Pseudomonas syringae pv. philadelphi	251706	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	6.15027	58.5	-	LJQY01	479	5846	5307	10/20/15	4/4/17	Scaffold	University of Toronto	SAMN03976264	GCA_001400595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/595/GCA_001400595.1_PpdICMP8903	-	ICMP8903
Xanthomonas fuscans subsp. fuscans	366649	PRJNA254240	254240	Proteobacteria	Gammaproteobacteria	5.00312	64.8	-	JPHG01	203	4467	4008	8/19/14	4/2/17	Contig	INRA	SAMN02902416	GCA_000741885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/885/GCA_000741885.1_ASM74188v1	25291773	CFBP4884
Acidovorax citrulli ZJU1106	1154764	PRJNA175738	175738	Proteobacteria	Betaproteobacteria	4.62731	67.8	-	AMRP01	2303	-	-	11/29/12	1/8/14	Contig	Institute of Biotechnology	SAMN02472173	GCA_000316055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/055/GCA_000316055.1_Acidovorax_avenae_subsp._citrulli	-	ZJU1106
Candidatus Liberibacter solanacearum	556287	PRJNA312579	312579	Proteobacteria	Alphaproteobacteria	1.2024	34.9	-	LVWB01	15	1099	991	2/2/17	4/6/17	Contig	University of Helsinki	SAMN04500800	GCA_001983655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/655/GCA_001983655.1_ASM198365v1	28158295	FIN111
Bacteroides xylanisolvens	371601	PRJNA377666	377666	FCB group	Bacteroidetes/Chlorobi group	5.72769	41.9	-	NFLX01	87	4520	4328	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473578	GCA_002161135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/135/GCA_002161135.1_ASM216113v1	-	An107
Butyrivibrio fibrisolvens ND3005	1280696	PRJNA185708	185708	Terrabacteria group	Firmicutes	4.46174	39.4	-	ATVY01	160	3788	3584	7/9/13	4/1/17	Contig	DOE Joint Genome Institute	SAMN02441576	GCA_000420965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/965/GCA_000420965.1_ASM42096v1	-	ND3005
Achromobacter xylosoxidans NH44784-1996	1167634	PRJNA40627	40627	Proteobacteria	Betaproteobacteria	6.91667	67.4	chromosome I:NC_021285.1/HE798385.1	-	1	6408	6251	5/22/13	4/3/17	Chromosome	"Department of Clinical Microbiology, University Hospital of Copenhagen, Denmark"	SAMEA3283131	GCA_000967095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/095/GCA_000967095.1_A.x.NH44784-1996	23894309	NH44784-1996
Streptococcus oralis	1303	PRJNA297767	297767	Terrabacteria group	Firmicutes	1.92894	41.3	-	LKPC01	21	1916	1789	10/22/15	4/4/17	Scaffold	The University of Queensland	SAMN04123206	GCA_001411485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/485/GCA_001411485.1_ASM141148v1	26769934	89a
Ochrobactrum intermedium	94625	PRJNA313372	313372	Proteobacteria	Alphaproteobacteria	4.9132	57.6	-	LWEA01	38	4696	4502	12/23/16	4/6/17	Contig	King Abdullah University of Science and Technology (KAUST)	SAMN04520138	GCA_001917355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/355/GCA_001917355.1_ASM191735v1	-	SA148
Streptomyces griseus subsp. griseus	67263	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.42904	73.9	-	JNZT01	239	6691	6361	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645348	GCA_000718525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/525/GCA_000718525.1_ASM71852v1	-	NRRL B-2621
Acinetobacter nosocomialis TG19596	1221296	PRJNA172707	172707	Proteobacteria	Gammaproteobacteria	3.79032	38.7	-	AMIZ01	86	3665	3486	10/2/12	3/30/17	Contig	Translational Genomics Research Institute	SAMN02471287	GCA_000301695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/695/GCA_000301695.1_ASM30169v1	-	TG19596
Ruminococcus flavefaciens MA2007	1410670	PRJNA223451	223451	Terrabacteria group	Firmicutes	3.39532	45.9	-	JHXF01	29	2991	2833	4/8/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02744016	GCA_000621845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/845/GCA_000621845.1_ASM62184v1	-	MA2007
Yersinia frederiksenii Y225	1454377	PRJNA236482	236482	Proteobacteria	Gammaproteobacteria	4.55089	47.282	chromosome:NZ_CP009364.1/CP009364.1; plasmid unnsmrf:NZ_CP009363.1/CP009363.1	-	2	4239	3988	2/9/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03010446	GCA_000834215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/215/GCA_000834215.1_ASM83421v1	25931590	Y225
Bacillus atrophaeus subsp. globigii	1529886	PRJNA243596	243596	Terrabacteria group	Firmicutes	4.17506	43.2	chromosome:NZ_CP007640.1/CP007640.1	-	1	4202	3993	8/21/14	4/2/17	Chromosome	Los Alamos National Laboratory	SAMN02740987	GCA_000742675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/675/GCA_000742675.1_ASM74267v1	25301645	BSS
Lactobacillus iners LactinV 01V1-a	879297	PRJNA52033	52033	Terrabacteria group	Firmicutes	1.29417	32.7	-	AEHQ01	92	1315	907	10/5/10	4/10/17	Contig	J. Craig Venter Institute	SAMN00115036	GCA_000149125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/149/125/GCA_000149125.2_ASM14912v1	-	LactinV 01V1-a
Helicobacter bilis	37372	PRJNA261711	261711	Proteobacteria	delta/epsilon subdivisions	2.50811	34.8	-	JRPI01	97	2341	1980	10/10/14	4/2/17	Scaffold	Massachusetts Institute of Technology	SAMN03075568	GCA_000765865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/865/GCA_000765865.1_ASM76586v1	-	ATCC 49314
Rhodococcus hoagii	43767	PRJNA306614	306614	Terrabacteria group	Actinobacteria	5.17058	68.8	-	LRQY01	47	4845	4685	5/18/16	6/6/17	Contig	Northumbria University	SAMN04357306	GCA_001646885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/646/885/GCA_001646885.1_re11	-	N1288
Hungatella hathewayi	154046	PRJEB10915	297013	Terrabacteria group	Firmicutes	6.75958	48	-	CZAZ01	94	6166	5954	10/1/15	4/4/17	Contig	SC	SAMEA3545379	GCA_001405995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/995/GCA_001405995.1_14207_7_39	-	2789STDY5834916
Corynebacterium aurimucosum	169292	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.80705	61.1	-	JUMN01	138	2606	2471	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03198165	GCA_001059615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/615/GCA_001059615.1_ASM105961v1	26230489	945_CAUR
Corynebacterium striatum	43770	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.91415	59.2	-	JVTN01	94	2766	2576	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197307	GCA_001053405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/405/GCA_001053405.1_ASM105340v1	26230489	1327_CAUR
Eikenella corrodens	539	PRJNA310649	310649	Proteobacteria	Betaproteobacteria	2.25848	55.7	-	LXSE01	35	2284	2175	5/19/16	4/5/17	Contig	Public Health Agency of Canada	SAMN04931629	GCA_001648255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/255/GCA_001648255.1_ASM164825v1	-	NML01-0040
Staphylococcus warneri Lyso 2 2011	1448850	PRJNA235868	235868	Terrabacteria group	Firmicutes	2.50896	32.7	-	JOPV01	49	2441	2329	6/27/14	4/2/17	Contig	IGS	SAMN02666777	GCA_000712925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/925/GCA_000712925.1_psaLyso211	-	Lyso 2 2011
Acinetobacter radioresistens TG02010	1221310	PRJNA172717	172717	Proteobacteria	Gammaproteobacteria	3.06385	41.5	-	AMJJ01	38	2878	2764	10/2/12	3/30/17	Contig	Translational Genomics Research Institute	SAMN02471290	GCA_000301795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/795/GCA_000301795.1_ASM30179v1	-	TG02010
Staphylococcus capitis VCU116	904334	PRJNA53751	53751	Terrabacteria group	Firmicutes	2.45257	32.9	-	AFTX01	38	2377	2273	7/25/11	3/30/17	Contig	J. Craig Venter Institute	SAMN00116853	GCA_000221525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/525/GCA_000221525.2_ASM22152v2	-	VCU116
Bacteroides cellulosilyticus	246787	PRJNA283626	283626	FCB group	Bacteroidetes/Chlorobi group	6.97533	42.9	-	LRGD01	122	5313	5082	1/25/16	4/11/17	Scaffold	Brigham & Women's Hospital	SAMN03653598	GCA_001535595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/595/GCA_001535595.1_ASM153559v1	26768901	CL09T06C25
Enterobacter cancerogenus	69218	PRJNA278225	278225	Proteobacteria	Gammaproteobacteria	4.8747	55.6	-	LDQH01	49	4719	4511	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401390	GCA_001475965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/965/GCA_001475965.1_ASM147596v1	26793183	NS111
Staphylococcus hominis	1290	PRJNA272632	272632	Terrabacteria group	Firmicutes	1.98363	31.5	-	LFKS01	15	1941	1829	7/10/15	4/3/17	Contig	The Pennsylvania State University	SAMN03490874	GCA_001051895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/895/GCA_001051895.1_ASM105189v1	26966197	As3
Yersinia enterocolitica subsp. enterocolitica 8081	393305	PRJNA190	190	Proteobacteria	Gammaproteobacteria	4.68362	47.2508	chromosome:NC_008800.1/AM286415.1; plasmid pYVe8081:NC_008791.1/AM286416.1	-	2	4259	4023	12/20/06	8/28/16	Complete Genome	Sanger Institute	SAMEA1705958	GCA_000009345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/345/GCA_000009345.1_ASM934v1	"1,283,453,917,173,480"	8081
Neisseria flavescens	484	PRJNA274665	274665	Proteobacteria	Betaproteobacteria	2.31662	48.9	-	LAEK01	67	2043	1996	4/8/16	4/8/16	Contig	university of milan	SAMN03329021	GCA_001618085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/085/GCA_001618085.1_ASM161808v1	-	CNF
Neisseria elongata subsp. elongata	214482	PRJEB17337	351494	Proteobacteria	Betaproteobacteria	2.36073	53.8	-	FOPS01	23	2381	2193	10/31/16	4/14/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421815	GCA_900113545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/545/GCA_900113545.1_IMG-taxon_2675903696_annotated_assembly	-	ATCC 25295
Providencia rettgeri	587	PRJEB9054	283376	Proteobacteria	Gammaproteobacteria	4.76794	40.3	-	CVLT01	99	4527	4315	5/9/15	4/3/17	Contig	URMITE	SAMEA3334667	GCA_001049815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/815/GCA_001049815.1_Providencia_rettgeri_H1736	-	H1736
Bifidobacterium pseudocatenulatum	28026	PRJEB6926	266500	Terrabacteria group	Actinobacteria	2.25434	56.4	-	CDPW01	6	1865	1735	1/29/15	4/3/17	Contig	IATA-CSIC	SAMEA2743237	GCA_000940535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/535/GCA_000940535.1_BPSEU7765_v1	-	CECT 7765
Providencia alcalifaciens PAL-2	1256992	PRJNA181048	181048	Proteobacteria	Gammaproteobacteria	4.11312	41.7	-	JAKZ01	87	3898	3708	1/31/14	4/2/17	Contig	JCVI	SAMN02641583	GCA_000527255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/255/GCA_000527255.1_PalPAL2v1.0	-	PAL-2
Rothia dentocariosa	2047	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.42558	53.8	-	JUWU01	85	2105	1991	7/10/15	4/3/17	Contig	University of Washington	SAMN03197898	GCA_001066935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/935/GCA_001066935.1_ASM106693v1	26230489	694_RDEN
Peptostreptococcus anaerobius	1261	PRJEB17122	351326	Terrabacteria group	Firmicutes	2.11681	35.7	-	FOVA01	60	2064	1901	10/31/16	4/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660467	GCA_900115025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/025/GCA_900115025.1_IMG-taxon_2593339272_annotated_assembly	-	C
Prevotella bivia DNF00650	1401072	PRJNA219670	219670	FCB group	Bacteroidetes/Chlorobi group	2.40818	39.7	-	JRNM01	173	2117	1986	9/26/14	4/2/17	Contig	J. Craig Venter Institute	SAMN02850971	GCA_000759165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/165/GCA_000759165.1_04_NF40_HMP2136v01	-	DNF00650
Gardnerella vaginalis	2702	PRJEB16365	349278	Terrabacteria group	Actinobacteria	1.68441	41.3	chromosome I:NZ_LT629773.1/LT629773.1	-	1	1447	1330	10/21/16	4/5/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04488545	GCA_900105405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/405/GCA_900105405.1_IMG-taxon_2630968301_annotated_assembly	-	DSM 4944
Bacteroides dorei CL03T12C01	997877	PRJNA64809	64809	FCB group	Bacteroidetes/Chlorobi group	5.40938	41.6	-	AGXI01	20	4557	4293	6/25/12	5/18/17	Scaffold	Broad Institute	SAMN02463920	GCA_000273075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/075/GCA_000273075.1_Bact_dore_CL03T12C01_V1	-	CL03T12C01
Lactobacillus ruminis S23	1402207	PRJNA219503	219503	Terrabacteria group	Firmicutes	1.90708	43.7	-	AWYB01	422	1894	1702	5/18/15	4/3/17	Contig	Teagasc Food Research Centre	SAMN02358826	GCA_001008745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/745/GCA_001008745.1_Lactobacillus_ruminis_S23	25879663	S23
Lactobacillus jensenii 115-3-CHN	575605	PRJNA38645	38645	Terrabacteria group	Firmicutes	1.64866	34.3	-	ACQN01	18	1544	1458	10/1/09	3/30/17	Scaffold	Broad Institute	SAMN02463747	GCA_000162435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/435/GCA_000162435.1_ASM16243v1	-	115-3-CHN
Acidithiobacillus caldus	33059	PRJNA325709	325709	Proteobacteria	Acidithiobacillia	3.14308	61	-	LZYG01	386	3223	2884	10/11/16	4/5/17	Contig	Central South University	SAMN05250860	GCA_001756745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/745/GCA_001756745.1_ASM175674v1	27999570	ZJ
Aggregatibacter aphrophilus	732	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	2.4065	42.2	-	NBTN01	5	2331	2023	4/10/17	4/13/17	Contig	US Food and Drug Administration 	SAMN04875574	GCA_002083125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/125/GCA_002083125.1_ASM208312v1	-	FDAARGOS_248
Yersinia enterocolitica	630	PRJNA240087	240087	Proteobacteria	Gammaproteobacteria	4.61541	47.2466	chromosome:NZ_CP009367.1/CP009367.1; plasmid unnamed:NZ_CP009366.1/CP009366.1	-	2	4349	4065	2/9/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03010445	GCA_000834195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/195/GCA_000834195.1_ASM83419v1	25931590	WA
Streptomyces viridochromogenes	1938	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.39398	72.1	-	LGUP01	424	8343	7777	8/19/15	3/11/17	Contig	University of Illinois	SAMN02900582	GCA_001270515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/515/GCA_001270515.1_P002IDBA1	-	NRRL 3427
Streptomyces hygroscopicus subsp. hygroscopicus	68042	PRJDB3201	311021	Terrabacteria group	Actinobacteria	9.4646	72	-	BBOX01	680	8065	7206	2/2/16	3/13/17	Contig	National Institute of Technology and Evaluation Biological Resource Center	SAMD00022817	GCA_001553455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/455/GCA_001553455.1_ASM155345v1	-	NBRC 13472
Streptococcus intermedius F0395	857292	PRJNA49885	49885	Terrabacteria group	Firmicutes	1.93405	38	-	AFXN01	11	1947	1756	11/2/11	3/30/17	Scaffold	Broad Institute	SAMN02463876	GCA_000234015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/015/GCA_000234015.1_Stre_inte_F0395_V1	-	F0395
Escherichia fergusonii	564	PRJNA254477	254477	Proteobacteria	Gammaproteobacteria	4.76407	49.9	-	JZWQ02	22	4795	4525	4/3/15	2/25/17	Contig	Canadian Food Inspection Agency	SAMN03400083	GCA_000968905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/905/GCA_000968905.2_ASM96890v2	27081122	GTA-EF02
Paenibacillus bovis	1616788	PRJNA299093	299093	Terrabacteria group	Firmicutes	5.5172	47.2203	chromosome:NZ_CP013023.1/CP013023.1; plasmid unnamed1:NZ_CP021170.1/CP021170.1	-	2	4795	4604	10/30/15	8/4/17	Complete Genome	State Key Laboratory of Dairy Biotechnology	SAMN04193493	GCA_001421015.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/015/GCA_001421015.2_ASM142101v2	-	BD3526
Rothia mucilaginosa	43675	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.35991	59.5	-	JVLK01	102	1867	1790	7/10/15	4/3/17	Contig	University of Washington	SAMN03197518	GCA_001064585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/585/GCA_001064585.1_ASM106458v1	26230489	329_RMUC
Vibrio sp. 2521-89	2014742	PRJNA391152	391152	Proteobacteria	Gammaproteobacteria	4.12386	47.2122	chromosome 1:NZ_CP022353.1/CP022353.1; chromosome 2:NZ_CP022352.1/CP022352.1	-	2	3953	3607	7/12/17	7/14/17	Complete Genome	University of Alberta	SAMN07258286	GCA_002216685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/685/GCA_002216685.1_ASM221668v1	-	2521-89
Lactobacillus crispatus SJ-3C-US	575598	PRJNA42533	42533	Terrabacteria group	Firmicutes	2.16503	37.1	-	ADDT01	70	2283	1952	7/8/10	4/2/17	Scaffold	Broad Institute	SAMN02463837	GCA_000176975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/975/GCA_000176975.2_ASM17697v2	-	SJ-3C-US
Dickeya zeae NCPPB 3531	1224146	PRJNA172950	172950	Proteobacteria	Gammaproteobacteria	4.62586	53.6997	chromosome:NZ_CM001980.1/CM001980.1	AOOI01	2	4120	3972	6/4/13	4/1/17	Chromosome	James Hutton Institute	SAMN02470101	GCA_000406225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/225/GCA_000406225.1_DZE3531_1.0	24265502	NCPPB 3531
Brachyspira hyodysenteriae	159	PRJNA326554	326554	Spirochaetes	Spirochaetia	3.17393	27.5	-	MAOY01	427	2684	2570	4/14/17	5/6/17	Contig	Murdoch University	SAMN05284665	GCA_002117505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/505/GCA_002117505.1_ASM211750v1	27489956	JR1
Teredinibacter turnerae T8513	1070977	PRJNA195849	195849	Proteobacteria	Gammaproteobacteria	5.26828	51	-	AUGB01	84	4312	4153	7/10/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02441515	GCA_000426805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/805/GCA_000426805.1_ASM42680v1	-	T8513
Mycobacterium kansasii	1768	PRJNA374853	374853	Terrabacteria group	Actinobacteria	6.42136	66.1	chromosome:NZ_CP019886.1/CP019886.1	-	1	5743	5363	4/11/17	4/13/17	Chromosome	University of Lodz	SAMN06339048	GCA_002085795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/795/GCA_002085795.1_ASM208579v1	-	10MK
Brevibacillus formosus	54913	PRJNA353906	353906	Terrabacteria group	Firmicutes	6.43701	47.2	chromosome:NZ_CP018145.1/CP018145.1	-	1	6175	5646	7/6/17	7/8/17	Complete Genome	Shaanxi Academy of Sciences	SAMN06028204	GCA_002215075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/075/GCA_002215075.1_ASM221507v1	-	NF2
Variovorax paradoxus	34073	PRJNA270638	270638	Proteobacteria	Betaproteobacteria	6.90651	67.1	-	JXQQ01	138	6428	6215	2/9/15	4/3/17	Contig	University of Chicago	SAMN03267909	GCA_000834655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/655/GCA_000834655.1_ASM83465v1	-	MEDvA23
Streptococcus equinus SN033	1280704	PRJNA185730	185730	Terrabacteria group	Firmicutes	1.84342	37	-	ATWZ01	13	1792	1739	7/9/13	4/1/17	Contig	DOE Joint Genome Institute	SAMN02440584	GCA_000421425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/425/GCA_000421425.1_ASM42142v1	-	SN033
Rhodococcus opacus	37919	PRJNA238534	238534	Terrabacteria group	Actinobacteria	6.37949	62.4	-	JOIM01	334	5835	5672	7/2/14	4/2/17	Contig	University of Illinois	SAMN02645507	GCA_000719995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/995/GCA_000719995.1_ASM71999v1	-	NRRL B-24011
Yersinia rohdei	29485	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.37257	47	-	CIFE01	46	4053	3869	4/21/15	4/11/17	Scaffold	SC	SAMEA859969	GCA_001320025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/025/GCA_001320025.1_4840_6_1	-	3343
Yersinia aldovae	29483	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	4.60572	47.6	-	CQCP01	72	4333	4060	3/23/15	4/10/17	Scaffold	SC	SAMEA1486379	GCA_001164505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/505/GCA_001164505.1_8016_2_87	-	IP23238
Borrelia hermsii YBT	1313295	PRJNA195598	195598	Spirochaetes	Spirochaetia	1.37793	30.0326	chromosome:NZ_CP005706.1/CP005706.1	-	39	1333	1184	1/27/14	4/2/17	Chromosome	Integrated Genomics	SAMN03081462	GCA_000568775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/775/GCA_000568775.1_ASM56877v1	-	YBT
Yersinia ruckeri	29486	PRJNA253851	253851	Proteobacteria	Gammaproteobacteria	3.77549	47.6	-	JPFO01	75	3497	3319	8/1/14	4/2/17	Contig	ADL Diagnostic Chile Ltda	SAMN02894447	GCA_000737165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/165/GCA_000737165.1_ASM73716v1	25169862	37551
Candidatus Liberibacter asiaticus	34021	PRJNA244958	244958	Proteobacteria	Alphaproteobacteria	1.15062	36.5	-	JMIL02	239	1131	827	7/10/14	4/17/17	Contig	"Crop Diseases, Pests, Genetics Research Unit San Joaquin Valley Agricultural Sciences Center"	SAMN02730100	GCA_000724755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/755/GCA_000724755.2_HHCA-assembly	25278540	HHCA
Candidatus Accumulibacter phosphatis	327160	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	5.26677	63	-	DEID01	170	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06457876	GCA_002352265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/265/GCA_002352265.1_ASM235226v1	28894102	-
Caldicellulosiruptor bescii	31899	PRJNA371178	371178	Terrabacteria group	Firmicutes	2.89167	35.2	-	NSHD01	2	2814	2575	9/13/17	9/15/17	Contig	DOE Joint Genome Institute	SAMN06296580	GCA_002300425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/425/GCA_002300425.1_ASM230042v1	-	RKCB121
Brevibacillus brevis	1393	PRJNA317405	317405	Terrabacteria group	Firmicutes	6.43466	46.8	-	LVYG01	64	6143	5809	5/22/16	4/12/17	Scaffold	Brevibacillus brevis GZDF3	SAMN04606799	GCA_001649505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/505/GCA_001649505.1_ASM164950v1	-	GZDF3.1
[Eubacterium] rectale DSM 17629	657318	PRJNA39159	39159	Terrabacteria group	Firmicutes	3.34495	41.6	chromosome:FP929042.1	-	1	2946	2898	3/25/10	2/27/15	Chromosome	MetaHIT	SAMEA3138356	GCA_000209935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/209/935/GCA_000209935.1_ASM20993v1	-	DSM 17629
Escherichia albertii TW08933	909209	PRJNA56117	56117	Proteobacteria	Gammaproteobacteria	4.51349	49.7	-	AEJU01	370	4633	4167	4/21/11	5/18/17	Contig	"Georgia Institute of Technology, School of Civil and Environmental Engineering"	SAMN02469843	GCA_000208425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/208/425/GCA_000208425.2_ASM20842v2	21482770	TW08933
Edwardsiella tarda ATCC 15947 = NBRC 105688	667121	PRJNA39897	39897	Proteobacteria	Gammaproteobacteria	3.69469	57.1	-	AFJG01	247	3446	3245	5/31/12	3/30/17	Contig	"State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology"	SAMN02469762	GCA_000264805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/805/GCA_000264805.1_ASM26480v1	22590641	ATCC 15947
Anoxybacillus flavithermus AK1	1297581	PRJNA190633	190633	Terrabacteria group	Firmicutes	2.63066	42.7	-	APCD01	50	2794	2596	4/4/13	4/1/17	Contig	King Abdullah University of Science and Technology	SAMN02470127	GCA_000353425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/425/GCA_000353425.1_Anoxybacillus_flavithermus_AK1	26044438	AK1
Kocuria rhizophila	72000	PRJNA256070	256070	Terrabacteria group	Actinobacteria	2.77851	70.6	-	JPWX02	90	2468	2349	8/3/15	4/11/17	Contig	Malek-Ashtar University of Technology	SAMN02937302	GCA_001190985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/190/985/GCA_001190985.2_ASM119098v2	26966202	RF
Sorangium cellulosum	56	PRJNA237843	237843	Proteobacteria	delta/epsilon subdivisions	11.9902	70.6	-	JEMB01	3600	9556	7869	3/11/16	3/11/16	Scaffold	Shandong University	SAMN02639848	GCA_001589185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/589/185/GCA_001589185.1_sce1107.1	-	So0011-07
Mycobacterium intracellulare ATCC 13950	487521	PRJNA27955	27955	Terrabacteria group	Actinobacteria	5.32856	68	-	ABIN01	353	5231	4826	12/10/07	5/19/17	Contig	McGill University	SAMN02470538	GCA_000172115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/115/GCA_000172115.1_ASM17211v1	-	ATCC 13950
Xanthomonas albilineans	29447	PRJNA269792	269792	Proteobacteria	Gammaproteobacteria	3.68125	63	-	JZHX01	1	3142	2879	3/25/15	4/3/17	Contig	CIRAD	SAMN03257616	GCA_000962995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/995/GCA_000962995.1_Xal-FIJ080-G1	-	FIJ080
Arcobacter butzleri L348	1447256	PRJNA233527	233527	Proteobacteria	delta/epsilon subdivisions	2.47136	27.1	-	JAIQ01	176	2570	2411	5/19/15	4/3/17	Scaffold	Agriculture and Agri-Foods Canada	SAMN02581416	GCA_001010585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/585/GCA_001010585.1_A.butzleri_L348_1.0	25947176	L348
Paenibacillus larvae subsp. larvae BRL-230010	392917	PRJNA13476	13476	Terrabacteria group	Firmicutes	4.03319	44.1	-	AARF01	362	4362	3662	7/13/06	3/30/17	Scaffold	Baylor College of Medicine	SAMN00253843	GCA_000153605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/605/GCA_000153605.1_ASM15360v1	17069642	-
Lactobacillus sakei	1599	PRJNA382621	382621	Terrabacteria group	Firmicutes	2.07996	41.1843	chromosome:NZ_CP020806.1/CP020806.1; plasmid pLS01:NZ_CP020807.1/CP020807.1; plasmid pLS02:NZ_CP020808.1/CP020808.1	-	3	2095	1961	4/24/17	4/26/17	Chromosome	Korea University	SAMN06718010	GCA_002105575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/575/GCA_002105575.1_ASM210557v1	-	Probio65
Prevotella ruminicola	839	PRJEB17171	351357	FCB group	Bacteroidetes/Chlorobi group	3.5594	47.8	-	FOLF01	38	2985	2892	10/31/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488493	GCA_900112275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/275/GCA_900112275.1_IMG-taxon_2623620485_annotated_assembly	-	BPI-162
Dehalococcoides mccartyi	61435	PRJNA376155	376155	Terrabacteria group	Chloroflexi	1.33773	47.2	chromosome:NZ_CP019969.1/CP019969.1	-	1	1440	1378	3/9/17	3/11/17	Complete Genome	University of Toronto	SAMN06350850	GCA_002024205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/205/GCA_002024205.1_ASM202420v1	-	KBVC2
Eubacterium limosum	1736	PRJNA270275	270275	Terrabacteria group	Firmicutes	4.42284	47.2	chromosome:NZ_CP019962.1/CP019962.1	-	1	4168	4023	3/1/17	4/8/17	Complete Genome	Korean Advanced Institute of Science and Technology	SAMN03265381	GCA_000807675.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/675/GCA_000807675.2_ASM80767v2	25676768	ATCC 8486
Rhodococcus erythropolis SK121	596309	PRJNA34067	34067	Terrabacteria group	Actinobacteria	6.7854	62.5	-	ACNO01	124	6363	6171	5/1/09	5/19/17	Contig	J. Craig Venter Institute	SAMN00002168	GCA_000174835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/835/GCA_000174835.1_ASM17483v1	-	SK121
Akkermansia muciniphila	239935	PRJEB21068	396410	PVC group	Verrucomicrobia	2.77449	55.7	-	FXXU01	90	2425	2341	7/29/17	8/7/17	Contig	"WAGENINGEN UNIVERSITY, LABORATORY OF SYSTEMS AND SYNTHETIC BIOLOGY."	SAMEA104102605	GCA_900184855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/184/855/GCA_900184855.1_Horse.fasta	-	-
Clostridium butyricum E4 str. BoNT E BL5262	632245	PRJNA34907	34907	Terrabacteria group	Firmicutes	4.75842	28.7	-	ACOM01	13	4284	4105	5/15/09	5/18/17	Scaffold	J. Craig Venter Institute	SAMN02470281	GCA_000182605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/182/605/GCA_000182605.1_ASM18260v1	-	BoNT E BL5262
Planococcus maritimus	192421	PRJNA328207	328207	Terrabacteria group	Firmicutes	3.28072	47.2	chromosome:NZ_CP016538.2/CP016538.2	-	1	3246	3107	7/20/16	4/13/17	Complete Genome	University of Malaya	SAMN05366382	GCA_001687625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/625/GCA_001687625.2_ASM168762v2	-	DSM 17275
Lysinibacillus sphaericus OT4b.31	1285586	PRJNA186959	186959	Terrabacteria group	Firmicutes	4.8585	37.5	-	AQPX01	72	4653	4441	5/10/13	4/1/17	Scaffold	Centro de Investigaciones Microbiológicas - Universidad de los Andes	SAMN02471364	GCA_000392615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/615/GCA_000392615.1_L.sphaericusOT4b.31_v01	-	OT4b.31
Acholeplasma laidlawii	2148	PRJNA342499	342499	Terrabacteria group	Tenericutes	1.30794	32	-	MIPS01	29	1251	1193	9/16/16	4/13/17	Scaffold	Universidade Federal do Rio Grande do Sul	SAMN05761484	GCA_001730135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/135/GCA_001730135.1_ASM173013v1	-	MDBK/IPV
Finegoldia magna SY403409CC001050417	866779	PRJNA51081	51081	Terrabacteria group	Firmicutes	2.03272	32	-	AFUI01	39	1970	1794	7/25/11	3/30/17	Contig	J. Craig Venter Institute	SAMN00031758	GCA_000221585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/585/GCA_000221585.2_ASM22158v2	-	SY403409CC001050417
Tannerella forsythia KS16	1307833	PRJDB1008	194417	FCB group	Bacteroidetes/Chlorobi group	3.393	47.2	chromosome Unknown:NZ_AP013045.1/AP013045.1	-	1	2877	2710	4/11/15	4/4/17	Complete Genome	"Tokyo Medical and Dental University, Graduate School of Medical and Dental Sciences, Section of Bacterial Phathogenesis"	SAMD00061005	GCA_001547855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/855/GCA_001547855.1_ASM154785v1	-	KS16
Pseudomonas mendocina EGD-AQ5	1390370	PRJNA215962	215962	Proteobacteria	Gammaproteobacteria	5.22557	62.7	-	AVQF01	19	4837	4730	9/11/13	4/2/17	Contig	National Environmental Engineering Research Institute-CSIR	SAMN02469681	GCA_000465575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/575/GCA_000465575.1_GS_De_Novo_Assembly	-	EGD-AQ5
Dehalococcoides mccartyi CG5	1432061	PRJNA230430	230430	Terrabacteria group	Chloroflexi	1.36215	47.2	chromosome:NZ_CP006951.1/CP006951.1	-	1	1459	1395	8/4/14	4/3/17	Complete Genome	GIS/NUS	SAMN02444489	GCA_000830885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/885/GCA_000830885.1_ASM83088v1	25028492	CG5
Thermosipho melanesiensis	46541	PRJNA231770	231770	Thermotogae	Thermotogae	1.89058	31.2	-	JYDA01	22	1959	1866	2/13/17	4/6/17	Scaffold	University of Oslo	SAMN03284850	GCA_001999595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/595/GCA_001999595.1_ASM199959v1	-	434
Campylobacter concisus UNSWCS	1242968	PRJNA177555	177555	Proteobacteria	delta/epsilon subdivisions	2.10873	39.2	-	ANNG01	177	2206	2081	9/13/13	4/1/17	Contig	The University of New South Wales	SAMN02471190	GCA_000466685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/685/GCA_000466685.1_UNSWCS	23984967	UNSWCS
Exiguobacterium sp. MH3	1399115	PRJNA225654	225654	Terrabacteria group	Firmicutes	3.16419	47.2	chromosome:NC_022794.1/CP006866.1	-	1	3286	3177	11/12/13	4/9/17	Complete Genome	"School of Environment and Energy, Shenzhen Graduate School of Peking University"	SAMN02351601	GCA_000496635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/635/GCA_000496635.1_ASM49663v1	24356831	MH3
Streptococcus iniae IUSA1	1273539	PRJNA184067	184067	Terrabacteria group	Firmicutes	2.22495	36.3	-	AOCT02	296	2167	1992	1/16/13	4/1/17	Contig	Veterinary Faculty:University Institute of Animal Health	SAMN02471473	GCA_000331915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/915/GCA_000331915.2_ASM33191v2	23516181	IUSA1
Desulfotomaculum ruminis DSM 2154	696281	PRJNA47605	47605	Terrabacteria group	Firmicutes	3.96901	47.2	chromosome:NC_015589.1/CP002780.1	-	1	3942	3753	5/26/11	4/7/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713633	GCA_000215085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/085/GCA_000215085.1_ASM21508v1	23408247	DSM 2154
Clostridium novyi A str. 4540	1443121	PRJNA233476	233476	Terrabacteria group	Firmicutes	2.5	28.5707	plasmid p1Cn4540:NZ_CM003326.1/CM003326.1	JENL01	81	2435	2235	6/20/14	4/3/17	Contig	National Veterinary Institute (SVA)	SAMN02593762	GCA_000724445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/445/GCA_000724445.2_4540_1.0	25254374	4540
Propionibacterium freudenreichii subsp. freudenreichii	66712	PRJEB6433	270197	Terrabacteria group	Actinobacteria	2.57358	67.3	-	-	72	2275	2141	-	-	Scaffold	INRA STLO	SAMEA2687133	GCA_000945235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/235/GCA_000945235.1_SURFING-batch1	-	-
Dehalococcoides mccartyi BAV1	216389	PRJNA15770	15770	Terrabacteria group	Chloroflexi	1.34189	47.2	chromosome:NC_009455.1/CP000688.1	-	1	1444	1374	5/7/07	8/28/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598353	GCA_000016705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/705/GCA_000016705.1_ASM1670v1	-	BAV1
Yersinia pseudotuberculosis IP 31758	349747	PRJNA16070	16070	Proteobacteria	Gammaproteobacteria	4.93513	47.1929	chromosome:NC_009708.1/CP000720.1; plasmid plasmid_153kb:NC_009705.1/CP000719.1; plasmid plasmid_59kb:NC_009704.1/CP000718.1	-	3	4534	4261	7/23/07	4/10/17	Complete Genome	TIGR	SAMN02604043	GCA_000016945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/945/GCA_000016945.1_ASM1694v1	17784789	IP 31758
Yersinia intermedia	631	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.64715	46.9	-	CQER01	51	4254	4024	3/23/15	4/3/17	Scaffold	SC	SAMEA859972	GCA_001116865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/865/GCA_001116865.1_4840_6_5	-	58735
Yersinia mollaretii	33060	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.54262	49	-	CTIO01	80	4112	3968	3/26/15	4/3/17	Scaffold	SC	SAMEA859865	GCA_001220765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/765/GCA_001220765.1_4821_7_10	-	107/02
Flavobacterium johnsoniae	986	PRJEB18345	355741	FCB group	Bacteroidetes/Chlorobi group	6.05248	34	-	FRAO01	16	5207	5102	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444146	GCA_900142355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/355/GCA_900142355.1_IMG-taxon_2698536700_annotated_assembly	-	DSM 2064
Leuconostoc citreum	33964	PRJEB5537	266700	Terrabacteria group	Firmicutes	1.75121	39	-	CCNH01	10	1749	1645	12/4/14	4/2/17	Contig	LISBP	SAMEA2668124	GCA_000820985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/985/GCA_000820985.1_assembly_1	-	-
Leuconostoc gelidum subsp. gasicomitatum	115778	PRJEB12231	324800	Terrabacteria group	Firmicutes	2.0581	36.5	-	FBTU01	29	2072	1956	6/8/16	7/28/17	Scaffold	UNIVERSITY OF HELSINKI	SAMEA3718679	GCA_900016205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/205/GCA_900016205.1_ASM90001620v1	-	PL111
Thermovirga lienii DSM 17291	580340	PRJNA33163	33163	Synergistetes	Synergistia	1.99965	47.1032	chromosome:NC_016148.1/CP003096.1; plasmid pTLIE01:NC_016149.1/CP003097.1	-	2	1965	1880	11/3/11	4/7/17	Complete Genome	DOE Joint Genome Institute	SAMN02232060	GCA_000233775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/775/GCA_000233775.1_ASM23377v1	22768366	DSM 17291
Oceanisphaera sp. AMac2203	1903694	PRJNA387127	387127	Proteobacteria	Gammaproteobacteria	2.9029	47.1	chromosome:NZ_CP021376.1/CP021376.1	-	1	2683	2486	5/25/17	5/31/17	Complete Genome	Kyung Hee University	SAMN07139035	GCA_002157875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/875/GCA_002157875.1_ASM215787v1	-	AMac2203
Vibrio sp. HENC-01	992010	PRJNA64027	64027	Proteobacteria	Gammaproteobacteria	5.67589	45	-	AJSQ01	138	5291	5123	10/15/12	4/16/17	Scaffold	Institute for Genome Sciences	SAMN00752546	GCA_000305715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/715/GCA_000305715.2_ASM30571v2	-	HENC-01
Staphylococcus saprophyticus	29385	PRJNA271512	271512	Terrabacteria group	Firmicutes	2.70842	33	-	JXBG01	44	2676	2515	1/26/15	4/3/17	Contig	University of Malaya	SAMN03274764	GCA_000828115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/115/GCA_000828115.1_ASM82811v1	26404582	SU8
Streptococcus sanguinis SK72	888809	PRJNA53159	53159	Terrabacteria group	Firmicutes	2.37601	43.3	-	AEXV01	6	2356	2265	3/10/11	3/30/17	Scaffold	Baylor College of Medicine	SAMN00253313	GCA_000192185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/185/GCA_000192185.1_ASM19218v1	-	SK72
Nitrosospira multiformis	1231	PRJEB17586	351955	Proteobacteria	Betaproteobacteria	3.44206	53.3	-	FPBZ01	55	3250	3054	11/2/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216417	GCA_900116835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/835/GCA_900116835.1_IMG-taxon_2671180079_annotated_assembly	-	Nl14
Exiguobacterium sp. ZWU0009	1224749	PRJNA205584	205584	Terrabacteria group	Firmicutes	3.2502	47.1	chromosome:NZ_CP018057.1/CP018057.1	-	1	3339	3196	11/29/16	4/17/17	Complete Genome	University of Oregon	SAMN03021535	GCA_000798935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/935/GCA_000798935.2_ASM79893v2	22980325	ZWU0009
Bacillus weihenstephanensis	86662	PRJNA318323	318323	Terrabacteria group	Firmicutes	5.61353	35.2	-	LXLM01	113	5901	5456	10/12/16	4/5/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04817074	GCA_001757785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/785/GCA_001757785.1_ASM175778v1	-	GOE1
Leeuwenhoekiella blandensis	360293	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.49168	39.1	-	DFLO01	254	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454528	GCA_002375245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/245/GCA_002375245.1_ASM237524v1	28894102	-
Photobacterium angustum	661	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.93039	39.4	-	JZSW01	50	4462	4150	3/10/15	4/3/17	Contig	FDA/CFSAN	SAMN03295473	GCA_000950155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/155/GCA_000950155.1_CFSAN029425_01.0	25931609	GCSL-A6
Parabacteroides distasonis str. 3776 D15 i	1339342	PRJNA206126	206126	FCB group	Bacteroidetes/Chlorobi group	5.78852	44.8	-	JNHK01	100	4998	4664	6/9/14	6/12/17	Contig	IGS	SAMN02370938	GCA_000699785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/785/GCA_000699785.1_ASM69978v1	-	3776 D15 i
Exiguobacterium sp. U13-1	1849031	PRJNA320863	320863	Terrabacteria group	Firmicutes	3.20863	47.1	chromosome:NZ_CP015731.1/CP015731.1	-	1	3292	3166	9/30/16	4/13/17	Complete Genome	New England Biolabs	SAMN04958524	GCA_001750115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/115/GCA_001750115.1_ASM175011v1	-	U13-1
Tannerella forsythia 3313	1307832	PRJDB1007	194416	FCB group	Bacteroidetes/Chlorobi group	3.35094	47.1	chromosome Unknown:NZ_AP013044.1/AP013044.1	-	1	2846	2674	4/11/15	4/4/17	Complete Genome	"Tokyo Medical and Dental University, Graduate School of Medical and Dental Sciences, Section of Bacterial Phathogenesis"	SAMD00061004	GCA_001547875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/875/GCA_001547875.1_ASM154787v1	-	3313
Neisseria lactamica NS19	933280	PRJNA60867	60867	Proteobacteria	Betaproteobacteria	2.13839	52.3	-	AEPI01	132	2285	1986	12/29/10	3/30/17	Contig	"University of Maryland, College Park"	SAMN02471876	GCA_000193795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/795/GCA_000193795.2_ASM19379v2	-	NS19
Thermotoga sp. RQ7	126738	PRJNA246218	246218	Thermotogae	Thermotogae	1.85162	47.1	chromosome:NZ_CP007633.1/CP007633.1	-	1	1899	1817	2/4/15	4/17/17	Complete Genome	Bowling Green State University	SAMN02744159	GCA_000832145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/145/GCA_000832145.1_ASM83214v1	25708162	RQ7
Xenorhabdus nematophila str. Websteri	1437826	PRJEB5090	270268	Proteobacteria	Gammaproteobacteria	6.38947	43.5	-	CCWW01	492	6077	5839	12/13/14	12/13/14	Contig	UW MADISON	SAMEA2501487	GCA_000820925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/925/GCA_000820925.1_XNW1	-	Websteri
Moraxella catarrhalis 7169	857581	PRJNA49907	49907	Proteobacteria	Gammaproteobacteria	1.9039	41.7	-	AERC01	35	1801	1700	3/22/11	3/30/17	Contig	Center for Genomic Sciences	SAMN02393785	GCA_000192905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/905/GCA_000192905.2_ASM19290v2	21269504	7169
Xenorhabdus bovienii str. feltiae Moldova	1398200	PRJEB4321	255479	Proteobacteria	Gammaproteobacteria	4.64055	44.4	-	CBSV01	234	4248	3881	7/17/14	4/2/17	Scaffold	UWM	SAMEA3139091	GCA_000736595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/595/GCA_000736595.1_XBFM_3523_PRJEB4321	-	feltiae Moldova
Agrobacterium vitis	373	PRJNA328318	328318	Proteobacteria	Alphaproteobacteria	5.97981	57.6	-	MBFD01	90	5402	5160	11/1/16	4/5/17	Contig	Monash University Malaysia	SAMN05369609	GCA_001860105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/105/GCA_001860105.1_ASM186010v1	-	Sz1
Bacteroides vulgatus str. 3775 SL(B) 10 (iv)	1339350	PRJNA206132	206132	FCB group	Bacteroidetes/Chlorobi group	5.44392	42.3	-	JNHI01	134	4761	4425	6/9/14	4/2/17	Contig	IGS	SAMN02370946	GCA_000699705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/705/GCA_000699705.1_ASM69970v1	-	3775 SL(B) 10 (iv)
Gluconobacter oxydans DSM 2003	1435296	PRJNA228961	228961	Proteobacteria	Alphaproteobacteria	2.93818	60.9	-	AYTY01	147	2773	2626	12/13/13	4/2/17	Contig	"State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University"	SAMN02404647	GCA_000507285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/507/285/GCA_000507285.1_DSM_2003	24786959	DSM 2003
Bacillus clausii	79880	PRJNA385749	385749	Terrabacteria group	Firmicutes	4.25313	44.6	-	NFZO01	45	4316	3843	8/23/17	8/25/17	Contig	Agharkar Research Institute	SAMN06909311	GCA_002266625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/625/GCA_002266625.1_ASM226662v1	-	B106
Citrobacter koseri	545	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.72726	53.8	-	JTAV01	1	4605	4290	11/14/14	7/6/17	Contig	US Food and Drug Administration 	SAMN02934540	GCA_000783445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/445/GCA_000783445.1_ASM78344v1	-	FDAARGOS_86
Dehalococcoides mccartyi DCMB5	1193807	PRJNA167311	167311	Terrabacteria group	Chloroflexi	1.4319	47.1	chromosome:NC_020386.1/CP004079.1	-	1	1524	1461	2/22/13	4/1/17	Complete Genome	Friedrich-Schiller-University of Jena	SAMN02603239	GCA_000341655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/655/GCA_000341655.1_ASM34165v1	23600617	DCMB5
Streptomyces scabiei	1930	PRJNA309594	309594	Terrabacteria group	Actinobacteria	10.4891	71.2	-	LRQX01	1798	9987	8466	2/5/16	3/12/17	Contig	University of Florida	SAMN04437012	GCA_001550225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/550/225/GCA_001550225.1_ASM155022v1	-	95-18
Clostridium beijerinckii G117	1200349	PRJNA168606	168606	Terrabacteria group	Firmicutes	5.81182	29.7	-	AKWA01	89	5110	4910	7/19/12	5/18/17	Scaffold	National University of Singapore	SAMN02470653	GCA_000280535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/535/GCA_000280535.1_CloBeiG117_1.0	22965093	G117
Erwinia amylovora ACW56400	1027397	PRJNA66419	66419	Proteobacteria	Gammaproteobacteria	3.86083	53.5512	plasmid EaACW_pEI70:NC_018999.1/CP002951.1; plasmid pEA29:NZ_AFHN01000023.1/AFHN01000023.1	AFHN01	24	3652	3472	12/3/12	3/31/17	Contig	Center for Biotechnology - CeBiTec	SAMN02469387	GCA_000240705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/705/GCA_000240705.2_ASM24070v2	-	ACW56400
Desulfovibrio salexigens DSM 2638	526222	PRJNA29541	29541	Proteobacteria	delta/epsilon subdivisions	4.28985	47.1	chromosome:NC_012881.1/CP001649.1	-	1	3911	3787	6/26/09	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00001870	GCA_000023445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/445/GCA_000023445.1_ASM2344v1	-	DSM 2638
Cronobacter sakazakii	28141	PRJNA251689	251689	Proteobacteria	Gammaproteobacteria	4.56418	56.8	-	JOLF01	233	4432	4183	10/9/15	4/4/17	Scaffold	"Nottingham Trent University, UK"	SAMN02839386	GCA_001308935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/308/935/GCA_001308935.1_ASM130893v1	26438044	702
Haliscomenobacter hydrossis DSM 1100	760192	PRJNA48289	48289	FCB group	Bacteroidetes/Chlorobi group	8.77165	47.0706	chromosome:NC_015510.1/CP002691.1; plasmid pHALHY01:NC_015511.1/CP002692.1; plasmid pHALHY02:NC_015512.1/CP002693.1; plasmid pHALHY03:NC_015513.1/CP002694.1	-	4	6927	6750	5/9/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713614	GCA_000212735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/212/735/GCA_000212735.1_ASM21273v1	21886862	DSM 1100
Lactobacillus paracollinoides	240427	PRJNA290141	290141	Terrabacteria group	Firmicutes	3.32136	47.0185	chromosome:NZ_CP014912.1/CP014912.1; plasmid pL11979-1:NZ_CP014913.1/CP014913.1; plasmid pL11979-2:NZ_CP014914.1/CP014914.1	-	3	2980	2773	8/10/16	4/13/17	Complete Genome	Technische Universitaet Muenchen	SAMN04505735	GCA_001702155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/702/155/GCA_001702155.1_ASM170215v1	-	TMW 1.1979
Leptolyngbya boryana dg5	1260963	PRJDB706	275585	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.80347	47.013	chromosome:NZ_AP014642.1/AP014642.1; plasmid pLBA:NZ_AP014643.1/AP014643.1; plasmid pLBX:NZ_AP014644.1/AP014644.1; plasmid pLBY:NZ_AP014645.1/AP014645.1	-	4	6375	6144	2/14/15	5/24/17	Complete Genome	"Graduate School of Bioagricultural Sciences, Nagoya University"	SAMD00019989	GCA_002142495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/495/GCA_002142495.1_ASM214249v1	25416288	dg5
Leptolyngbya boryana IAM M-101	411966	PRJDB706	275585	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.80347	47.013	chromosome:NZ_AP014638.1/AP014638.1; plasmid pLBA:NZ_AP014639.1/AP014639.1; plasmid pLBX:NZ_AP014640.1/AP014640.1; plasmid pLBY:NZ_AP014641.1/AP014641.1	-	4	6376	6146	2/14/15	5/24/17	Complete Genome	"Graduate School of Bioagricultural Sciences, Nagoya University"	SAMD00019988	GCA_002142475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/475/GCA_002142475.1_ASM214247v1	25416288	IAM M-101
Crocosphaera watsonii WH 0005	423472	PRJEB1315	218985	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.96112	37.7	-	CAQL01	1266	5796	4712	9/11/13	4/10/17	Contig	UCSC	SAMEA3146296	GCA_001050835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/835/GCA_001050835.1_ASM105083v1	-	WH 0005
Brucella ovis IntaBari-2010-47-871	1293915	PRJNA189527	189527	Proteobacteria	Alphaproteobacteria	3.29084	57.2	-	AQIJ01	22	3410	3033	4/16/13	4/1/17	Contig	Broad Institute	SAMN01921148	GCA_000365905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/905/GCA_000365905.1_Bruc_ovis_IntaBari-2010-47-871_V1	-	IntaBari-2010-47-871
Moorella thermoacetica Y72	1325331	PRJDB1097	238520	Terrabacteria group	Firmicutes	2.68642	55.7	-	BARR01	51	2636	2479	2/18/14	4/5/17	Scaffold	National Institute of Advanced Industrial Science and Technology	SAMD00036734	GCA_000576385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/385/GCA_000576385.2_ASM57638v2	24316126	Y72
Photorhabdus luminescens	29488	PRJNA274142	274142	Proteobacteria	Gammaproteobacteria	5.36169	42.5	-	JXUR02	802	4727	4269	2/24/15	4/11/17	Contig	Washington State University	SAMN03323289	GCA_000931955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/955/GCA_000931955.2_ASM93195v2	26697329	NBAII Hb105
Staphylococcus haemolyticus	1283	PRJNA246629	246629	Terrabacteria group	Firmicutes	2.44025	32.6	-	JQHB01	42	2419	2298	10/6/14	3/24/17	Contig	Universiti of Malaya	SAMN02996615	GCA_000763705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/705/GCA_000763705.1_ASM76370v1	-	C10D
Yersinia similis	367190	PRJNA238010	238010	Proteobacteria	Gammaproteobacteria	4.96441	47.0098	chromosome:NZ_CP007230.1/CP007230.1; plasmid unnamed:NZ_CP007231.1/CP007231.1	-	2	4636	4235	2/26/14	4/9/17	Complete Genome	Friedrich-Loeffler-Institut	SAMN02640350	GCA_000582515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/515/GCA_000582515.1_ASM58251v1	24675860	228
Burkholderia vietnamiensis	60552	PRJNA277272	277272	Proteobacteria	Betaproteobacteria	7.09577	66.9	-	JZUR01	207	6495	6162	4/24/15	4/3/17	Contig	University of Malaya	SAMN03389084	GCA_000980955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/955/GCA_000980955.1_ASM98095v1	-	CBMB40
Leifsonia xyli subsp. xyli	59736	PRJNA281030	281030	Terrabacteria group	Actinobacteria	2.24329	67.9	-	LFYU01	2724	-	-	9/4/15	9/4/15	Contig	"Guangxi University, Nanning, China"	SAMN03734875	GCA_001278935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/935/GCA_001278935.1_ASM127893v1	-	GXBZ01
Brevibacterium linens	1703	PRJNA387187	387187	Terrabacteria group	Actinobacteria	4.18227	62.7	-	NRGQ01	68	3840	3696	9/21/17	9/23/17	Scaffold	"Dutton Lab, UCSD"	SAMN07141156	GCA_002332325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/325/GCA_002332325.1_ASM233232v1	28644126	962_8
Chromobacterium violaceum	536	PRJNA277407	277407	Proteobacteria	Betaproteobacteria	4.75452	65	-	LDUT01	151	4425	4264	6/30/15	4/3/17	Contig	University of Malaya	SAMN03744442	GCA_001043755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/755/GCA_001043755.1_ASM104375v1	-	LK15
Yersinia enterocolitica	630	PRJNA260989	260989	Proteobacteria	Gammaproteobacteria	4.83732	47.0053	chromosome:NZ_CP009456.1/CP009456.1; plasmid unnamed:NZ_CP009457.1/CP009457.1	-	2	4498	4275	10/1/15	4/10/17	Complete Genome	Seoul National Univerisity	SAMN03078687	GCA_001304755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/755/GCA_001304755.1_ASM130475v1	-	FORC-002
Yersinia enterocolitica	630	PRJNA279015	279015	Proteobacteria	Gammaproteobacteria	4.83732	47.0053	chromosome:NZ_CP011118.1/CP011118.1; plasmid pFORC2:NZ_CP011119.1/CP011119.1	-	2	4497	4276	5/5/15	3/26/17	Complete Genome	Seoul National University	SAMN03434891	GCA_000987925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/987/925/GCA_000987925.1_ASM98792v1	-	FORC_002
Actinobacteria bacterium IMCC26103	1848756	PRJNA321003	321003	Terrabacteria group	Actinobacteria	1.45652	47	chromosome:NZ_CP015604.1/CP015604.1	-	1	1473	1426	2/16/17	9/4/17	Complete Genome	Inha University	SAMN04961844	GCA_002284875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/875/GCA_002284875.1_ASM228487v1	28186143	IMCC26103
Pediococcus pentosaceus	1255	PRJDB4140	338436	Terrabacteria group	Firmicutes	1.77486	37.2	-	BBZC01	1	1760	1666	8/9/16	4/5/17	Scaffold	"Department of Molecular Biology and Biotechnology, Graduate School of Biomedical and Health Sciences, Hiroshima University"	SAMD00036446	GCA_001748065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/065/GCA_001748065.1_ASM174806v1	-	LP28
Phycisphaerae bacterium SM-Chi-D1	1851148	PRJNA369380	369380	PVC group	Planctomycetes	3.86836	47	chromosome:CP019646.1	-	1	2992	2931	2/15/17	2/15/17	Complete Genome	Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures	SAMN06284589	GCA_001999965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/965/GCA_001999965.1_ASM199996v1	-	SM-Chi-D1
Dehalococcoides mccartyi IBARAKI	1407653	PRJDB1489	295273	Terrabacteria group	Chloroflexi	1.45106	47	chromosome Unknown:NZ_AP014563.1/AP014563.1	-	1	1556	1471	9/9/15	4/4/17	Complete Genome	Tokyo University of Agriculture and Technology	SAMD00061021	GCA_001547795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/795/GCA_001547795.1_ASM154779v1	-	IBARAKI
Yersinia rohdei	29485	PRJNA240109	240109	Proteobacteria	Gammaproteobacteria	4.37225	47	chromosome:NZ_CP009787.1/CP009787.1	-	1	3935	3726	2/9/15	4/10/17	Complete Genome	Los Alamos National Laboratory	SAMN03144976	GCA_000834455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/455/GCA_000834455.1_ASM83445v1	25931590	YRA
Dehalococcoides mccartyi GY50	1388758	PRJNA215679	215679	Terrabacteria group	Chloroflexi	1.40742	47	chromosome:NC_022964.1/CP006730.1	-	1	1499	1427	11/26/13	4/2/17	Complete Genome	National University of Singapore	SAMN02641533	GCA_000499365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/365/GCA_000499365.1_ASM49936v1	-	GY50
Bartonella henselae JK 50	1402981	PRJNA221539	221539	Proteobacteria	Alphaproteobacteria	1.92145	38.2	-	AZZS01	5	1728	1505	1/8/14	4/10/17	Scaffold	Broad Institute	SAMN02364140	GCA_000516695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/695/GCA_000516695.1_Bart_hens_JK_50_V1	-	JK 50
Lactobacillus acidophilus ATCC 4796	525306	PRJNA31477	31477	Terrabacteria group	Firmicutes	2.0205	34.7	-	ACHN01	38	1975	1799	3/10/09	3/30/17	Scaffold	Baylor College of Medicine	SAMN00001471	GCA_000159715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/715/GCA_000159715.1_ASM15971v1	-	ATCC 4796
Clostridium tetani	1513	PRJNA265068	265068	Terrabacteria group	Firmicutes	2.8243	28.5	-	JWIX01	93	2775	2673	1/15/15	4/2/17	Scaffold	Aarhus University	SAMN03262537	GCA_000818755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/755/GCA_000818755.1_ASM81875v1	25638019	A
Rhodobacter capsulatus B6	1415162	PRJNA225631	225631	Proteobacteria	Alphaproteobacteria	3.80577	66.4	-	AYQA01	113	3580	3392	12/11/13	4/4/17	Scaffold	University of British Columbia	SAMN02471353	GCA_000506425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/425/GCA_000506425.2_denovokmer200	24526637	B6
Bartonella quintana JK 7	1402974	PRJNA221532	221532	Proteobacteria	Alphaproteobacteria	1.59383	38.9	-	AZZZ01	3	1397	1204	1/8/14	4/10/17	Scaffold	Broad Institute	SAMN02364133	GCA_000516835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/835/GCA_000516835.1_Bart_quin_JK_7_V1	-	JK 7
Streptococcus uberis EF20/0145	1450184	PRJNA234018	234018	Terrabacteria group	Firmicutes	1.93304	36.3	-	JANW01	17	1932	1861	4/22/15	4/3/17	Contig	University of Nottingham	SAMN02570392	GCA_000975355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/975/355/GCA_000975355.1_ASM97535v1	25898893	EF20/0145
Bacteroides thetaiotaomicron	818	PRJEB8299	276429	FCB group	Bacteroidetes/Chlorobi group	5.99592	43.5	-	CDQO01	1730	4938	3961	2/24/15	4/4/17	Contig	CGS-GL	SAMEA3217995	GCA_001373135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/135/GCA_001373135.1_2e6A_assembly	-	2e6A
Salmonella bongori serovar 48:z35:-	1160722	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.44486	51.3	-	MXOC01	36	4363	4079	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367601	GCA_002035265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/265/GCA_002035265.1_ASM203526v1	-	BCW_1557
Pectobacterium atrosepticum	29471	PRJNA258504	258504	Proteobacteria	Gammaproteobacteria	4.89874	51	-	JQHO01	53	4417	4199	9/8/14	4/2/17	Contig	Food and Environment Research Agency	SAMN02999476	GCA_000749965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/965/GCA_000749965.1_ASM74996v1	-	NCPPB 3404
Chlamydia abortus LLG	1003238	PRJNA65241	65241	PVC group	Chlamydiae	1.14369	39.9	chromosome:NZ_CP018296.1/CP018296.1	-	1	1027	946	1/26/17	3/24/17	Chromosome	Moredun Research Institute	SAMN02470555	GCA_000213905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/905/GCA_000213905.2_ASM21390v2	-	LLG
Anaplasma phagocytophilum str. HGE1	1217107	PRJNA171710	171710	Proteobacteria	Alphaproteobacteria	1.4696	41.6	-	APHH01	2	1181	1061	4/23/13	4/2/17	Contig	University of Minnesota	SAMN02471893	GCA_000478425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/425/GCA_000478425.1_ASM47842v1	-	HGE1
Idiomarina loihiensis GSL 199	1321370	PRJNA196939	196939	Proteobacteria	Gammaproteobacteria	2.83976	47	chromosome:NC_021286.1/CP005964.1	-	1	2721	2639	5/23/13	4/8/17	Complete Genome	Utah State University	SAMN02604286	GCA_000401175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/175/GCA_000401175.1_ASM40117v1	-	GSL 199
Tannerella forsythia 92A2	203275	PRJNA319	319	FCB group	Bacteroidetes/Chlorobi group	3.40552	47	chromosome:NC_016610.1/CP003191.1	-	1	2853	2703	12/15/11	3/30/17	Complete Genome	TIGR	SAMN02604009	GCA_000238215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/215/GCA_000238215.1_ASM23821v1	-	92A2
Cupriavidus metallidurans	119219	PRJNA305084	305084	Proteobacteria	Betaproteobacteria	6.54153	63.8	-	LQAD01	38	6103	5916	2/1/16	4/4/17	Contig	Griffith University	SAMN04357041	GCA_001543455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/455/GCA_001543455.1_ASM154345v1	-	NDB3NO24
Thiomicrospira cyclica ALM1	717773	PRJNA52629	52629	Proteobacteria	Gammaproteobacteria	1.93246	47	chromosome:NC_015581.1/CP002776.1	-	1	1718	1661	5/25/11	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN02232061	GCA_000214825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/825/GCA_000214825.1_ASM21482v1	-	ALM1
Archaeoglobus veneficus SNP6	693661	PRJNA51621	51621	Euryarchaeota	Archaeoglobi	1.90194	47	chromosome:NC_015320.1/CP002588.1	-	1	2152	2072	3/31/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713598	GCA_000194625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/625/GCA_000194625.1_ASM19462v1	-	SNP6
Dehalococcoides mccartyi CBDB1	255470	PRJNA15604	15604	Terrabacteria group	Chloroflexi	1.3955	47	chromosome:NC_007356.1/AJ965256.1	-	1	1479	1412	8/19/05	3/29/17	Complete Genome	Max Planck Institute	SAMEA3138187	GCA_000009025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/025/GCA_000009025.1_ASM902v1	16116419	CBDB1
Idiomarina loihiensis L2TR	283942	PRJNA10790	10790	Proteobacteria	Gammaproteobacteria	2.83932	47	chromosome:NC_006512.1/AE017340.1	-	1	2722	2640	12/2/04	4/6/17	Complete Genome	University of Hawaii at Manoa	SAMN02604184	GCA_000008465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/465/GCA_000008465.1_ASM846v1	15596722	L2TR
Listeria innocua	1642	PRJNA243331	243331	Terrabacteria group	Firmicutes	2.89091	37.3	-	JRYX01	12	2957	2850	11/7/14	2/26/17	Contig	FDA/CFSAN	SAMN02769797	GCA_000773035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/035/GCA_000773035.1_LS888	25540336	MOD1_LS888
Acaryochloris marina MBIC11017	329726	PRJNA12997	12997	Terrabacteria group	Cyanobacteria/Melainabacteria group	8.3616	46.9889	chromosome:NC_009925.1/CP000828.1; plasmid pREB1:NC_009926.1/CP000838.1; plasmid pREB2:NC_009927.1/CP000839.1; plasmid pREB3:NC_009928.1/CP000840.1; plasmid pREB4:NC_009929.1/CP000841.1; plasmid pREB5:NC_009930.1/CP000842.1; plasmid pREB6:NC_009931.1/CP000843.1; plasmid pREB7:NC_009932.1/CP000844.1; plasmid pREB8:NC_009933.1/CP000845.1; plasmid pREB9:NC_009934.1/CP000846.1	-	10	7572	7163	10/16/07	4/17/17	Complete Genome	Washington University	SAMN02604308	GCA_000018105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/105/GCA_000018105.1_ASM1810v1	18252824	MBIC11017
Clostridium acetobutylicum	1488	PRJNA263987	263987	Terrabacteria group	Firmicutes	3.79605	30.8	-	JRWL01	49	3624	3463	11/21/14	4/9/17	Scaffold	Guangxi Academy of Sciences	SAMN03112708	GCA_000785855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/855/GCA_000785855.1_ASM78585v1	25744989	GXAS18-1
Lactobacillus gasseri SV-16A-US	575604	PRJNA42543	42543	Terrabacteria group	Firmicutes	2.00174	34.9	-	ADDY01	10	2006	1868	7/8/10	4/2/17	Scaffold	Broad Institute	SAMN02463842	GCA_000177035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/035/GCA_000177035.2_ASM17703v2	-	SV-16A-US
Yersinia enterocolitica	630	PRJNA281164	281164	Proteobacteria	Gammaproteobacteria	4.65108	46.9582	chromosome:NZ_CP011286.1/CP011286.1; plasmid unnamed:NZ_CP011287.1/CP011287.1	-	2	4334	4063	10/2/15	3/26/17	Complete Genome	University of Oxford	SAMN03490473	GCA_001305635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/305/635/GCA_001305635.1_ASM130563v1	-	KNG22703
Yersinia enterocolitica subsp. palearctica 105.5R(r)	994476	PRJNA53341	53341	Proteobacteria	Gammaproteobacteria	4.62181	46.9578	chromosome:NC_015224.1/CP002246.1; plasmid 105.5R(r)p:NC_015475.1/CP002247.1	-	2	4331	4004	3/10/11	3/22/17	Complete Genome	Nankai University	SAMN02603637	GCA_000192105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/105/GCA_000192105.1_ASM19210v1	21325549	105.5R(r)
Streptococcus gordonii	1302	PRJNA304678	304678	Terrabacteria group	Firmicutes	2.16402	40.5	-	LOBS01	12	2105	1993	12/18/15	4/4/17	Scaffold	Slagelse Hospital	SAMN04306534	GCA_001469295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/295/GCA_001469295.1_ASM146929v1	26893427	ATCC 10558
Ruminococcus albus	1264	PRJEB16851	351030	Terrabacteria group	Firmicutes	3.84524	45.2	-	FOAT01	47	3462	3300	10/29/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216469	GCA_900109655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/655/GCA_900109655.1_IMG-taxon_2651870358_annotated_assembly	-	KH2T6
Acidithiobacillus ferrooxidans	920	PRJNA251676	251676	Proteobacteria	Acidithiobacillia	4.18422	57.6	-	JNNH01	2090	-	-	7/21/14	12/23/15	Contig	Lanzhou University	SAMN02838509	GCA_000732185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/185/GCA_000732185.1_ASM73218v1	26697393	DLC-5
Yersinia enterocolitica	630	PRJNA240088	240088	Proteobacteria	Gammaproteobacteria	4.60395	46.9576	chromosome:NZ_CP009838.1/CP009838.1; plasmid pCD:NZ_CP009837.1/CP009837.1	-	2	4317	4000	2/9/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03161068	GCA_000834735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/735/GCA_000834735.1_ASM83473v1	25931590	2516-87
Vibrio vulnificus MO6-24/O	914127	PRJNA59881	59881	Proteobacteria	Gammaproteobacteria	5.00777	46.9535	chromosome I:NC_014965.1/CP002469.1; chromosome II:NC_014966.1/CP002470.1	-	2	4707	4473	1/24/11	5/19/17	Complete Genome	"National Research Laboratory of Molecular Microbiology and Toxicology, Center for Food Safety and Toxicology, Department of Food Science and Biotechnology, Seoul National University, Seoul 151-921, S. Korea."	SAMN02603666	GCA_000186585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/585/GCA_000186585.1_ASM18658v1	21317338	MO6-24/O
Mesorhizobium loti R7A	935547	PRJNA74389	74389	Proteobacteria	Alphaproteobacteria	6.52953	62.9	-	AZAM01	1	6347	6107	12/5/13	4/2/17	Scaffold	JGI	SAMN02597167	GCA_000504265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/265/GCA_000504265.1_ASM50426v1	-	R7A
Yersinia enterocolitica subsp. palearctica Y11	930944	PRJEA60483	60483	Proteobacteria	Gammaproteobacteria	4.62588	46.953	chromosome:NC_017564.1/FR729477.2; plasmid pYV03:NC_017565.1/FR745874.1	-	2	4362	4027	1/14/11	3/23/17	Complete Genome	Max von Pettenkofer-Institute	SAMEA2271938	GCA_000253175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/175/GCA_000253175.1_ASM25317v1	21296963	Y11
Bordetella bronchiseptica	518	PRJNA243868	243868	Proteobacteria	Betaproteobacteria	5.14289	68.2	chromosome:NZ_CM002881.1/CM002881.1	JMRX01	1	9843	9582	8/19/14	4/2/17	Chromosome	Los Alamos National Laboratory	SAMN02767257	GCA_000746565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/565/GCA_000746565.1_ASM74656v1	25237025	ATCC 10580
Treponema denticola AL-2	999426	PRJNA64903	64903	Spirochaetes	Spirochaetia	2.84309	38.0501	chromosome:NZ_CM001798.1/CM001798.1	AGDQ01	1	5427	5245	2/7/13	4/1/17	Chromosome	Broad Institute	SAMN02596716	GCA_000340725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/725/GCA_000340725.1_Trep_dent_AL-2_V1	-	AL-2
Bacteroides uniformis str. 3978 T3 ii	1339349	PRJNA206129	206129	FCB group	Bacteroidetes/Chlorobi group	4.97301	46.3	-	JNHN01	185	4270	3918	6/9/14	4/2/17	Contig	IGS	SAMN02370943	GCA_000699825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/825/GCA_000699825.1_ASM69982v1	-	3978 T3 ii
[Clostridium] bolteae 90B3	997895	PRJNA64849	64849	Terrabacteria group	Firmicutes	6.53846	49.4	-	AGYJ01	4	6080	5916	4/19/13	5/19/17	Scaffold	Broad Institute	SAMN02596760	GCA_000371685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/685/GCA_000371685.1_Clos_bolt_90B3_V1	-	90B3
Bacteroides ovatus CL03T12C18	997886	PRJNA64827	64827	FCB group	Bacteroidetes/Chlorobi group	7.011	42.3	-	AGXU01	19	5620	5357	6/25/12	5/18/17	Scaffold	Broad Institute	SAMN02463929	GCA_000273215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/215/GCA_000273215.1_Bact_ovat_CL03T12C18_V1	-	CL03T12C18
Dorea longicatena	88431	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.23303	41.9	-	CYXO01	51	3199	3009	10/1/15	4/4/17	Contig	SC	SAMEA3545424	GCA_001405975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/975/GCA_001405975.1_14207_7_84	-	2789STDY5834961
[Ruminococcus] gnavus	33038	PRJEB9853	312810	Terrabacteria group	Firmicutes	3.7275	42.6	-	FJUS01	5	3739	3263	3/8/16	4/12/17	Contig	WASHINGTON UNIVERSITY CENTER FOR GENOME SCIENCES	SAMEA3873033	GCA_900067245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/067/245/GCA_900067245.1_R.gnavus_MappedAssembly	-	-
Blautia obeum	40520	PRJEB10915	297013	Terrabacteria group	Firmicutes	4.14703	41.3	-	CYZP01	103	3841	3600	10/1/15	4/4/17	Contig	SC	SAMEA3545327	GCA_001405455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/455/GCA_001405455.1_13470_2_80	-	2789STDY5834861
Ruminococcus torques L2-14	657313	PRJNA39169	39169	Terrabacteria group	Firmicutes	3.34168	41.1	chromosome:FP929055.1	-	1	2848	2798	3/25/10	2/27/15	Chromosome	MetaHIT	SAMEA3138361	GCA_000210035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/035/GCA_000210035.1_ASM21003v1	-	L2-14
Providencia stuartii	588	PRJNA291202	291202	Proteobacteria	Gammaproteobacteria	4.43864	41.7	-	LGYB01	59	4193	3975	8/10/15	4/4/17	Scaffold	National Institute of Health Dr Ricardo Jorge	SAMN03940593	GCA_001267785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/785/GCA_001267785.1_ASM126778v1	26404603	INSRA21868
Dehalococcoides mccartyi	61435	PRJNA300318	300318	Terrabacteria group	Chloroflexi	1.52129	46.9	chromosome:NZ_CP013074.1/CP013074.1	-	1	1657	1589	12/6/16	4/6/17	Complete Genome	National University of Singapore	SAMN03771551	GCA_001889305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/305/GCA_001889305.1_ASM188930v1	-	CG3
Clostridium sporogenes	1509	PRJNA266242	266242	Terrabacteria group	Firmicutes	3.99715	27.9	-	JZJO01	300	3778	2302	3/23/15	4/3/17	Contig	Centers for Disease Control and Prevention	SAMN03169462	GCA_000960165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/165/GCA_000960165.1_ASM96016v1	-	85-3852
Burkholderia glumae	337	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	6.87412	68.1	-	NJFN01	4	6017	5629	6/23/17	6/26/17	Contig	US Food and Drug Administration 	SAMN06173359	GCA_002206305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/305/GCA_002206305.1_ASM220630v1	-	FDAARGOS_346
Dehalococcoides sp. UCH007	1522671	PRJDB2892	248804	Terrabacteria group	Chloroflexi	1.47355	46.9	chromosome:NZ_AP014722.1/AP014722.1	-	1	1569	1505	2/17/15	4/10/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00018699	GCA_001010485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/485/GCA_001010485.1_ASM101048v1	-	UCH007
Bacillus coagulans DSM 1 = ATCC 7050	1121088	PRJNA238056	238056	Terrabacteria group	Firmicutes	3.367	46.9	chromosome:NZ_CP009709.1/CP009709.1	-	1	3434	3088	2/5/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03120846	GCA_000832905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/905/GCA_000832905.1_ASM83290v1	25931591	ATCC 7050
Enterococcus gallinarum NBRC 100675	1218091	PRJDB264	172087	Terrabacteria group	Firmicutes	3.77488	39.8	-	BCQE01	87	3662	3474	1/28/16	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00045734	GCA_001544275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/275/GCA_001544275.1_ASM154427v1	-	NBRC 100675
Enterococcus casseliflavus 14-MB-W-14	1259825	PRJNA179543	179543	Terrabacteria group	Firmicutes	3.65402	42.7	-	ATIC01	29	3541	3418	6/25/13	4/1/17	Scaffold	The Genome Institute	SAMN02436705	GCA_000414945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/945/GCA_000414945.1_ASM41494v1	-	14-MB-W-14
Brucella ceti str. Cudo	595497	PRJNA33611	33611	Proteobacteria	Alphaproteobacteria	3.38927	57.2	-	ACJD01	7	3460	3156	3/24/09	3/30/17	Contig	Virginia Bioinformatics Institute (VBI)	SAMN02472088	GCA_000182425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/182/425/GCA_000182425.1_ASM18242v1	-	Cudo
Dehalococcoides mccartyi CG1	1432059	PRJNA230427	230427	Terrabacteria group	Chloroflexi	1.48668	46.9	chromosome:NZ_CP006949.1/CP006949.1	-	1	1600	1527	8/4/14	4/3/17	Complete Genome	GIS/NUS	SAMN02444487	GCA_000830925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/925/GCA_000830925.1_ASM83092v1	25028492	CG1
Vibrio splendidus	29497	PRJNA294195	294195	Proteobacteria	Gammaproteobacteria	5.89544	44.2	-	LIZL01	162	5366	5044	10/2/15	4/4/17	Contig	UC Davis	SAMN04017838	GCA_001306215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/215/GCA_001306215.1_ASM130621v1	26893436	UCD-SED10
Thermocrinis albus DSM 14484	638303	PRJNA37275	37275	Aquificae	Aquificae	1.50058	46.9	chromosome:NC_013894.1/CP001931.1	-	1	1640	1580	2/19/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598512	GCA_000025605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/605/GCA_000025605.1_ASM2560v1	21304702	DSM 14484
Thermotoga neapolitana DSM 4359	309803	PRJNA21023	21023	Thermotogae	Thermotogae	1.88456	46.9	chromosome:NC_011978.1/CP000916.1	-	1	1938	1833	1/27/09	4/7/17	Complete Genome	Genotech Corp.	SAMN02603251	GCA_000018945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/945/GCA_000018945.1_ASM1894v1	19129632	DSM 4359
Dehalococcoides mccartyi	61435	PRJNA278704	278704	Terrabacteria group	Chloroflexi	1.46791	46.8737	chromosome:NZ_CP011127.1/CP011127.1; plasmid pDhc6:NZ_CP011128.1/CP011128.1	-	2	1587	1521	4/5/16	4/5/17	Complete Genome	National University of Singapore	SAMN03428876	GCA_001610775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/775/GCA_001610775.1_ASM161077v1	-	11a5
Paenibacillus sp. IHB B 3084	867076	PRJNA300823	300823	Terrabacteria group	Firmicutes	5.88479	46.8692	chromosome:CP013203.1; plasmid pHD01:CP013204.1; plasmid pHD02:CP013205.1; plasmid pHD03:CP013206.1; plasmid pHD04:CP013207.1; plasmid pHD05:CP013208.1; plasmid pHD06:CP013209.1	-	7	5294	4622	11/23/15	11/23/15	Complete Genome	CSIR-Institute of Himalayan Bioresource Technology	SAMN04229371	GCA_001447315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/447/315/GCA_001447315.1_ASM144731v1	-	IHB B 3084
Haemophilus parasuis 84-17975	1437068	PRJNA231554	231554	Proteobacteria	Gammaproteobacteria	2.3141	40	-	AZQU01	68	2334	2070	2/5/14	4/10/17	Scaffold	Beijing Institute of Microbiology and Epidemiology	SAMN02460616	GCA_000558945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/945/GCA_000558945.1_84-17975	-	84-17975
Yersinia enterocolitica	630	PRJNA335321	335321	Proteobacteria	Gammaproteobacteria	4.83874	46.864	chromosome:NZ_CP016944.1/CP016944.1; plasmid unnamed1:NZ_CP016942.1/CP016942.1; plasmid unnamed2:NZ_CP016943.1/CP016943.1	-	3	4649	4148	8/23/16	4/17/17	Complete Genome	"University of Zurich, Vetsuisse Faculty"	SAMN05440502	GCA_001708655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/655/GCA_001708655.1_ASM170865v1	-	YE3
Yersinia enterocolitica	630	PRJNA335326	335326	Proteobacteria	Gammaproteobacteria	4.85082	46.8515	chromosome:NZ_CP016935.1/CP016935.1; plasmid unnamed1:NZ_CP016934.1/CP016934.1; plasmid unnamed2:NZ_CP016936.1/CP016936.1	-	3	4668	4166	8/23/16	4/17/17	Complete Genome	"University of Zurich, Vetsuisse Faculty"	SAMN05440573	GCA_001708555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/555/GCA_001708555.1_ASM170855v1	-	YE7
Helicobacter pullorum	35818	PRJNA326720	326720	Proteobacteria	delta/epsilon subdivisions	1.69177	34.6	-	MAPB01	108	1673	1572	8/4/16	4/5/17	Contig	University of Hyderabad	SAMN05291444	GCA_001698625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/625/GCA_001698625.1_ASM169862v1	-	NAP6W24
Streptococcus equi subsp. zooepidemicus SzS31A1	1352602	PRJNA210018	210018	Terrabacteria group	Firmicutes	2.02588	41.6	-	AUXA02	89	1925	1812	8/9/13	3/24/17	Contig	Copenhagen University	SAMN02221861	GCA_000445225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/225/GCA_000445225.2_ASM44522v2	24009118	SzS31A1
Micrococcus luteus	1270	PRJNA239291	239291	Terrabacteria group	Actinobacteria	2.63523	72.9	-	JFYU01	118	2471	2280	4/14/14	4/2/17	Contig	Monash University Malaysia	SAMN02676629	GCA_000632145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/145/GCA_000632145.1_Willow_Endophyte_RIT324w	24812212	RIT324w
Vibrio vulnificus	672	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.97878	46.845	chromosome 1:NZ_CP014048.1/CP014048.1; chromosome 2:NZ_CP014049.1/CP014049.1	-	2	4711	4423	2/11/16	4/4/17	Complete Genome	US Food and Drug Administration 	SAMN03996334	GCA_001558515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/515/GCA_001558515.1_ASM155851v1	-	ATL 6-1306
Bifidobacterium bifidum NCIMB 41171	398513	PRJNA30055	30055	Terrabacteria group	Actinobacteria	2.20269	62.7	-	ABQP01	9	1873	1738	8/26/08	3/30/17	Scaffold	Broad Institute	SAMN02463676	GCA_000155395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/395/GCA_000155395.1_ASM15539v1	-	NCIMB 41171
Yersinia kristensenii	28152	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.73779	47.5	-	MWTL01	264	4539	3549	6/14/17	6/14/17	Contig	SRCAMB	SAMN06344232	GCA_002192915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/915/GCA_002192915.1_ASM219291v1	-	SCPM-O-B-7606
Yersinia frederiksenii	29484	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	5.0988	47.6	-	CQEC01	40	4768	4584	3/22/15	4/4/17	Scaffold	SC	SAMEA859870	GCA_001089645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/645/GCA_001089645.1_4821_6_9	-	498/85
Bacillus mycoides Rock1-4	526998	PRJNA29703	29703	Terrabacteria group	Firmicutes	5.8415	35.3503	chromosome:NZ_CM000743.1/CM000743.1	ACMV01	1	12212	11439	4/30/09	6/15/17	Chromosome	Naval Medical Research Center	SAMN00727715	GCA_000161415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/415/GCA_000161415.1_ASM16141v1	22645259	Rock1-4
Comamonas testosteroni NBRC 100989	1111078	PRJNA70139	70139	Proteobacteria	Betaproteobacteria	5.58936	61.9	-	BAEC01	153	5110	4846	11/19/11	5/18/17	Contig	National Institute of Technology and Evaluation	SAMD00041788	GCA_000241245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/245/GCA_000241245.2_ASM24124v2	-	NBRC 100989
Yersinia enterocolitica	630	PRJNA335324	335324	Proteobacteria	Gammaproteobacteria	4.78704	46.8412	chromosome:NZ_CP016940.1/CP016940.1; plasmid unnamed1:NZ_CP016939.1/CP016939.1; plasmid unnamed2:NZ_CP016941.1/CP016941.1	-	3	4597	4109	8/23/16	4/17/17	Complete Genome	"University of Zurich, Vetsuisse Faculty"	SAMN05440511	GCA_001708615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/615/GCA_001708615.1_ASM170861v1	-	YE5
Ruminiclostridium thermocellum DSM 2360	572545	PRJNA32579	32579	Terrabacteria group	Firmicutes	3.45461	39.1	-	ACVX01	110	3050	2851	8/17/09	3/30/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN00017478	GCA_000175715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/715/GCA_000175715.1_ASM17571v1	-	DSM 2360
Vibrio vulnificus	672	PRJNA323980	323980	Proteobacteria	Gammaproteobacteria	5.11789	46.837	chromosome I:NZ_CP016321.1/CP016321.1; chromosome II:NZ_CP016322.1/CP016322.1; plasmid unnamed:NZ_CP016323.1/CP016323.1	-	3	4832	4533	6/22/17	6/24/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN05196200	GCA_002204915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/915/GCA_002204915.1_ASM220491v1	-	FORC_037
Yersinia enterocolitica	630	PRJNA329498	329498	Proteobacteria	Gammaproteobacteria	4.88578	46.8289	chromosome:NZ_CP016931.1/CP016931.1; plasmid unnamed1:NZ_CP016932.1/CP016932.1; plasmid unnamed2:NZ_CP016933.1/CP016933.1	-	3	4703	4209	8/23/16	3/28/17	Complete Genome	"University of Zurich, Vetsuisse Faculty"	SAMN05413581	GCA_001708575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/575/GCA_001708575.1_ASM170857v1	-	YE165
Yersinia enterocolitica	630	PRJNA335325	335325	Proteobacteria	Gammaproteobacteria	4.92314	46.8154	chromosome:NZ_CP016937.1/CP016937.1; plasmid unnamed1:NZ_CP016938.1/CP016938.1	-	2	4731	4220	8/23/16	4/17/17	Complete Genome	"University of Zurich, Vetsuisse Faculty"	SAMN05440514	GCA_001708595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/595/GCA_001708595.1_ASM170859v1	-	YE6
Lactobacillus paracollinoides	240427	PRJNA290141	290141	Terrabacteria group	Firmicutes	3.66371	46.8106	chromosome:NZ_CP014915.1/CP014915.1; plasmid pL11994-1:NZ_CP014916.1/CP014916.1; plasmid pL11994-2:NZ_CP014917.1/CP014917.1; plasmid pL11994-3:NZ_CP014918.1/CP014918.1; plasmid pL11994-4:NZ_CP014919.1/CP014919.1; plasmid pL11994-5:NZ_CP014920.1/CP014920.1; plasmid pL11994-6:NZ_CP014921.1/CP014921.1; plasmid pL11994-7:NZ_CP014922.1/CP014922.1; plasmid pL11994-8:NZ_CP014923.1/CP014923.1	-	9	3339	3074	8/10/16	4/13/17	Complete Genome	Technische Universitaet Muenchen	SAMN04505736	GCA_001702175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/702/175/GCA_001702175.1_ASM170217v1	-	TMW 1.1994
Paenibacillus kribbensis	172713	PRJNA377834	377834	Terrabacteria group	Firmicutes	5.7787	46.8	chromosome:NZ_CP020028.1/CP020028.1	-	1	5146	4833	8/3/17	8/6/17	Complete Genome	Korea Research Institute of Bioscience and Biotechnology	SAMN06473270	GCA_002240415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/415/GCA_002240415.1_ASM224041v1	-	AM49
Lactobacillus rhamnosus	47715	PRJNA359638	359638	Terrabacteria group	Firmicutes	2.88497	46.8	chromosome:NZ_CP020464.1/CP020464.1	-	1	2907	2729	4/3/17	4/5/17	Complete Genome	University of Life Sciences in Lublin	SAMN06196449	GCA_002076955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/955/GCA_002076955.1_ASM207695v1	-	Pen
Lactobacillus rhamnosus	47715	PRJNA337919	337919	Terrabacteria group	Firmicutes	2.93495	46.8	chromosome:NZ_CP016823.1/CP016823.1	-	1	2982	2570	9/8/16	4/21/17	Complete Genome	KUMC	SAMN05513711	GCA_001721925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/925/GCA_001721925.1_ASM172192v1	-	LRB
Borrelia garinii Far04	519049	PRJNA29573	29573	Spirochaetes	Spirochaetia	1.12744	27.9047	plasmid Far04_cp26:NC_011844.1/CP001319.1; plasmid Far04_lp17:NC_011871.1/CP001315.1; plasmid Far04_lp25:NC_011875.1/CP001317.1; plasmid Far04_lp28-1:NC_011873.1/CP001316.1; plasmid Far04_lp32-10:NC_011869.1/CP001320.1; plasmid Far04_lp36:NC_011867.1/CP001314.1; plasmid Far04_lp54:NC_011877.1/CP001318.1	ABPZ02	40	1111	931	5/13/08	3/6/17	Contig	J Craig Venter Institute	SAMN02436278	GCA_000172595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/595/GCA_000172595.2_ASM17259v2	22123755	Far04
Streptococcus dysgalactiae subsp. equisimilis	119602	PRJNA327242	327242	Terrabacteria group	Firmicutes	2.11287	39.5	-	MAUA01	76	2117	1949	7/9/16	4/5/17	Scaffold	The UT MD Anderson Cancer Center	SAMN05327342	GCA_001682765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/765/GCA_001682765.1_ASM168276v1	-	UT_4277_BB
Bifidobacterium dentium	1689	PRJDB4597	325619	Terrabacteria group	Actinobacteria	2.55269	58.5	-	BCYE01	26	2158	2016	6/10/16	4/5/17	Contig	Yakult Central Institute	SAMD00047615	GCA_001686085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/085/GCA_001686085.1_ASM168608v1	27340092	DE-29
Methanobrevibacter smithii TS146A	911118	PRJNA59643	59643	Euryarchaeota	Methanobacteria	1.792	31.2	-	AELM01	66	1745	1526	2/17/11	3/30/17	Contig	Washington University in St.Louis	SAMN02436679	GCA_000189835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/835/GCA_000189835.2_ASM18983v2	21317366	TS146A
Microcystis aeruginosa PCC 9717	1160286	PRJEA88479	88479	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.30034	42.7	-	CAII01	264	5267	4609	5/28/12	3/31/17	Scaffold	Genoscope CEA	SAMEA2272067	GCA_000312165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/165/GCA_000312165.1_ASM31216v1	-	PCC 9717
Bradyrhizobium japonicum in8p8	1304878	PRJNA195876	195876	Proteobacteria	Alphaproteobacteria	7.58992	63.8	-	AUGD01	52	7270	6947	7/10/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02440647	GCA_000426845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/845/GCA_000426845.1_ASM42684v1	-	in8p8
Burkholderia ambifaria MEX-5	396597	PRJNA20667	20667	Proteobacteria	Betaproteobacteria	7.85547	66	-	ABLK01	706	7502	6579	3/27/08	5/18/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000044	GCA_000182015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/182/015/GCA_000182015.1_ASM18201v1	-	MEX-5
Bacillus velezensis	492670	PRJNA319572	319572	Terrabacteria group	Firmicutes	3.81472	46.8	chromosome:CP015417.1	-	1	3683	3538	5/2/16	5/2/16	Complete Genome	University of Tulsa	SAMN04895861	GCA_001634675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/675/GCA_001634675.1_ASM163467v1	-	SB1216
Geoglobus acetivorans	565033	PRJNA261279	261279	Euryarchaeota	Archaeoglobi	1.86082	46.8	chromosome:NZ_CP009552.1/CP009552.1	-	1	2233	2159	12/4/14	4/17/17	Complete Genome	Centre Bioengineering RAS	SAMN03070125	GCA_000789255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/255/GCA_000789255.1_ASM78925v1	25416759	SBH6
Candidatus Hodgkinia cicadicola	573658	PRJNA233978	233978	Proteobacteria	Alphaproteobacteria	0.133698	46.8	chromosome:CP007232.1	-	1	177	121	3/7/14	5/1/17	Complete Genome	University of Montana	SAMN02801774	GCA_000831405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/405/GCA_000831405.1_ASM83140v1	-	-
Clavibacter michiganensis	28447	PRJNA338485	338485	Terrabacteria group	Actinobacteria	3.38766	72.8	-	MDJX01	374	3365	2983	5/19/17	5/24/17	Scaffold	University of California	SAMN05559656	GCA_002151115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/115/GCA_002151115.1_ASM215111v1	-	CFBP7576
Lactobacillus rhamnosus LOCK900	1316933	PRJNA196481	196481	Terrabacteria group	Firmicutes	2.88338	46.8	chromosome:NC_021723.1/CP005484.1	-	1	2901	2734	7/8/13	4/1/17	Complete Genome	IBB PAS	SAMN02603328	GCA_000418475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/475/GCA_000418475.1_ASM41847v1	23950137	LOCK900
Ochrobactrum anthropi	529	PRJNA312205	312205	Proteobacteria	Alphaproteobacteria	4.53807	56	-	LSVB01	17	4265	4141	2/26/16	4/5/17	Contig	University of Houston	SAMN04495806	GCA_001575075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/075/GCA_001575075.1_ASM157507v1	-	FRAF13
Lactobacillus rhamnosus LOCK908	1318634	PRJNA196823	196823	Terrabacteria group	Firmicutes	2.9909	46.8	chromosome:NC_021725.1/CP005485.1	-	1	2988	2811	7/8/13	4/1/17	Complete Genome	IBB PAS	SAMN02603329	GCA_000418495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/495/GCA_000418495.1_ASM41849v1	24558250	LOCK908
Treponema pallidum subsp. pallidum DAL-1	491081	PRJNA30649	30649	Spirochaetes	Spirochaetia	1.13997	52.8	chromosome:NC_016844.1/CP003115.1	-	1	1066	1003	2/6/12	3/30/17	Chromosome	Baylor College of Medicine	SAMN02603007	GCA_000246815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/815/GCA_000246815.1_ASM24681v1	22292095	DAL-1
Paenibacillus terrae HPL-003	985665	PRJNA67295	67295	Terrabacteria group	Firmicutes	6.0834	46.8	chromosome:NC_016641.1/CP003107.1	-	1	5510	5137	11/16/11	5/19/17	Complete Genome	Macrogen Inc.	SAMN02603583	GCA_000235585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/585/GCA_000235585.1_ASM23558v1	22328761	HPL-003
Lactobacillus rhamnosus ATCC 8530	1088720	PRJNA73355	73355	Terrabacteria group	Firmicutes	2.96034	46.8	chromosome:NC_017491.1/CP003094.1	-	1	2958	2776	11/3/11	3/30/17	Complete Genome	University of Saskatchewan	SAMN02604241	GCA_000233755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/755/GCA_000233755.1_ASM23375v1	22247527	ATCC 8530
Thermosediminibacter oceani DSM 16646	555079	PRJNA30983	30983	Terrabacteria group	Firmicutes	2.28003	46.8	chromosome:NC_014377.1/CP002131.1	-	1	2322	2195	8/5/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713558	GCA_000144645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/645/GCA_000144645.1_ASM14464v1	21304740	DSM 16646
Burkholderia oklahomensis C6786	441162	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.07254	67.1	-	LOST01	95	6625	6137	1/21/16	4/11/17	Contig	Northern Arizona University	SAMN03449125	GCA_001522135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/135/GCA_001522135.1_ASM152213v1	-	C6786
Yersinia enterocolitica	630	PRJNA339119	339119	Proteobacteria	Gammaproteobacteria	4.84196	46.7677	chromosome:NZ_CP016945.1/CP016945.1; plasmid unnamed1:NZ_CP016946.1/CP016946.1; plasmid unnamed2:NZ_CP016947.1/CP016947.1	-	3	4655	4158	8/23/16	4/17/17	Complete Genome	"University of Zurich, Vetsuisse Faculty"	SAMN05440467	GCA_001708635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/635/GCA_001708635.1_ASM170863v1	-	YE1
Lactobacillus rhamnosus	47715	PRJNA308635	308635	Terrabacteria group	Firmicutes	3.11476	46.7581	chromosome:NZ_CP014201.1/CP014201.1; plasmid unnamed:NZ_CP014202.1/CP014202.1	-	2	3206	2931	2/6/17	4/6/17	Complete Genome	"AtoGen CO., Ltd."	SAMN04404358	GCA_001988935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/935/GCA_001988935.1_ASM198893v1	-	BFE5264
Aliivibrio fischeri	668	PRJNA311605	311605	Proteobacteria	Gammaproteobacteria	4.4291	38.2	-	LTYU01	64	4111	3962	5/9/16	4/5/17	Contig	MIT	SAMN04486005	GCA_001640315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/315/GCA_001640315.1_ASM164031v1	27128997	ES213
Bacillus velezensis	492670	PRJNA393382	393382	Terrabacteria group	Firmicutes	3.87256	46.7534	chromosome:NZ_CP022556.1/CP022556.1; plasmid unnamed1:NZ_CP022557.1/CP022557.1; plasmid unnamed2:NZ_CP022558.1/CP022558.1	-	3	3858	3657	8/1/17	8/21/17	Complete Genome	Nanjing Agricultural University	SAMN07371516	GCA_002238395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/395/GCA_002238395.1_ASM223839v1	-	NJAU-Z9
Ureaplasma urealyticum serovar 5 str. ATCC 27817	518603	PRJNA19415	19415	Terrabacteria group	Tenericutes	0.884046	26	-	AAZR01	18	710	639	4/24/07	3/30/17	Contig	TIGR	SAMN02435856	GCA_000169915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/915/GCA_000169915.1_ASM16991v1	-	ATCC 27817
Vibrio vulnificus	672	PRJNA266859	266859	Proteobacteria	Gammaproteobacteria	5.0607	46.7453	chromosome 1:NZ_CP009984.1/CP009984.1; chromosome 2:NZ_CP009985.1/CP009985.1	-	2	4760	4466	11/5/15	4/4/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN03174938	GCA_001433435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/435/GCA_001433435.1_ASM143343v1	-	FORC_009
Vibrio vulnificus	672	PRJNA286054	286054	Proteobacteria	Gammaproteobacteria	5.07237	46.7449	chromosome I:NZ_CP011775.1/CP011775.1; chromosome II:NZ_CP011776.1/CP011776.1	-	2	4779	4460	6/1/16	4/5/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN03764475	GCA_001653775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/775/GCA_001653775.1_ASM165377v1	-	FORC_016
Vibrio vulnificus CMCP6	216895	PRJNA349	349	Proteobacteria	Gammaproteobacteria	5.1267	46.7159	chromosome I:NC_004459.3/AE016795.3; chromosome II:NC_004460.2/AE016796.2	-	2	4826	4547	12/22/02	5/19/17	Complete Genome	Chonnam Univ.	SAMN02603130	GCA_000039765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/039/765/GCA_000039765.1_ASM3976v1	"1,450,046,321,245,840"	CMCP6
Vibrio vulnificus NBRC 15645 = ATCC 27562	1219061	PRJNA295776	295776	Proteobacteria	Gammaproteobacteria	5.00716	46.7086	chromosome 1:NZ_CP012882.1/CP012882.1; chromosome 2:NZ_CP012881.1/CP012881.1	-	2	4649	4364	7/24/17	8/17/17	Complete Genome	Center for Genomics and Bioinformatics	SAMN04097182	GCA_002224265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/265/GCA_002224265.1_ASM222426v1	-	ATCC 27562
Orientia tsutsugamushi str. TA716	1359175	PRJNA212457	212457	Proteobacteria	Alphaproteobacteria	2.22126	30.4	-	LAOA01	234	2419	1372	3/27/15	4/3/17	Contig	IGS	SAMN02693795	GCA_000964855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/855/GCA_000964855.1_ASM96485v1	-	TA716
Methylobacterium radiotolerans	31998	PRJNA278215	278215	Proteobacteria	Alphaproteobacteria	6.69315	70.9	-	LDRP01	351	6331	6120	12/22/15	12/22/15	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401380	GCA_001477075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/075/GCA_001477075.1_ASM147707v1	26793183	SB3
Vibrio vulnificus	672	PRJNA256021	256021	Proteobacteria	Gammaproteobacteria	5.12735	46.7044	chromosome I:NZ_CP009261.1/CP009261.1; chromosome II:NZ_CP009262.1/CP009262.1; plasmid p93U204:NZ_CP009263.1/CP009263.1	-	3	4682	4427	8/29/14	4/2/17	Complete Genome	Academia Sinica	SAMN03009989	GCA_000746665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/665/GCA_000746665.1_ASM74666v1	25278541	93U204
Methylobacterium extorquens DSM 13060	882800	PRJNA62143	62143	Proteobacteria	Alphaproteobacteria	6.67121	68.3	-	AGJK01	612	6718	5897	1/23/12	5/19/17	Contig	JGI	SAMN02261401	GCA_000243435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/435/GCA_000243435.2_ASM24343v2	-	DSM 13060
Lactococcus garvieae UNIUD074	1017266	PRJNA66291	66291	Terrabacteria group	Firmicutes	2.17147	38.7	-	AFHF01	25	2210	2026	5/5/11	3/30/17	Contig	UNIVERSITY OF OVIEDO	SAMN02471926	GCA_000212475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/212/475/GCA_000212475.2_LacGar1.0	21602331	UNIUD074
Bifidobacterium stercoris JCM 15918	1437612	PRJNA239866	239866	Terrabacteria group	Actinobacteria	2.30461	59.4	-	JGZQ01	15	1964	1831	8/18/14	4/2/17	Contig	University of Parma	SAMN02673454	GCA_000741415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/415/GCA_000741415.1_Bifste	"2,508,549,325,107,960"	DSM 24849
Vibrio harveyi	669	PRJDB3039	271954	Proteobacteria	Gammaproteobacteria	5.75743	44.9	-	BBKY01	337	5337	5134	1/7/15	4/2/17	Scaffold	University of Miyazaki	SAMD00019140	GCA_000818375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/375/GCA_000818375.1_ASM81837v1	25527835	823TEZ1
Faecalibacterium prausnitzii	853	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.92898	54	-	CZBH01	1135	3143	2947	10/1/15	4/4/17	Contig	SC	SAMEA3545393	GCA_001406615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/615/GCA_001406615.1_14207_7_53	-	2789STDY5834930
Borreliella afzelii	29518	PRJNA350557	350557	Spirochaetes	Spirochaetia	1.2595	27.8891	chromosome:NZ_CP018262.1/CP018262.1; plasmid cp26:NZ_CP018266.1/CP018266.1; plasmid lp28-3:NZ_CP018265.1/CP018265.1; plasmid lp54-lp38 fusion:NZ_CP018263.1/CP018263.1	-	32	1265	1165	12/9/16	4/10/17	Chromosome	NIH/NIAID	SAMN05941949	GCA_001900865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/865/GCA_001900865.1_ASM190086v1	-	BO23
Photobacterium damselae subsp. damselae	85581	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.86515	39.5	-	JZSI01	81	4406	3834	3/10/15	4/3/17	Contig	FDA/CFSAN	SAMN03295487	GCA_000950315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/315/GCA_000950315.1_CFSAN029439_01.0	-	ATCC 33539
Lactobacillus rhamnosus DSM 14870	1380361	PRJNA213732	213732	Terrabacteria group	Firmicutes	3.01315	46.7	chromosome:NZ_CP006804.1/CP006804.1	-	1	3057	2842	9/8/17	9/11/17	Complete Genome	Karolinska Institutet	SAMN07605138	GCA_002287945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/945/GCA_002287945.1_ASM228794v1	-	DSM 14870
Geobacillus stearothermophilus ATCC 7953	937593	PRJNA233505	233505	Terrabacteria group	Firmicutes	2.78723	52.4	-	JALS01	129	3083	2654	6/12/14	4/2/17	Contig	MRIGlobal	SAMN02569809	GCA_000705495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/495/GCA_000705495.1_GbsDonk1.0	-	ATCC 7953
Ralstonia pickettii	329	PRJNA238509	238509	Proteobacteria	Betaproteobacteria	5.49087	63.6	-	JFZH01	32	5234	5027	3/28/14	4/2/17	Contig	Belgian Nuclear Research Center	SAMN02644836	GCA_000607185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/185/GCA_000607185.1_assembly_v1_of_Ralstonia_pickettii_CW2	25189592	CW2
Lactobacillus rhamnosus	47715	PRJNA340067	340067	Terrabacteria group	Firmicutes	2.97259	46.7	chromosome:NZ_CP017063.1/CP017063.1	-	1	3025	2808	9/5/17	9/7/17	Complete Genome	Korea Food Research Institute	SAMN05631078	GCA_002286235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/235/GCA_002286235.1_ASM228623v1	-	LR5
Delftia acidovorans	80866	PRJNA278502	278502	Proteobacteria	Betaproteobacteria	6.79764	65.9	-	LATT01	692	6708	5458	4/14/15	4/3/17	Scaffold	Institut Pasteur de Paris	SAMN03457231	GCA_000972325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/325/GCA_000972325.1_ASM97232v1	-	CM13
Salinispora arenicola CNP105	1169174	PRJNA175173	175173	Terrabacteria group	Actinobacteria	5.91967	69.4	-	ARGZ01	69	5426	5057	4/19/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02440450	GCA_000375045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/045/GCA_000375045.1_ASM37504v1	-	CNP105
Lactobacillus rhamnosus	47715	PRJNA387641	387641	Terrabacteria group	Firmicutes	3.04784	46.7	chromosome:NZ_CP021426.1/CP021426.1	-	1	3124	2928	5/30/17	6/1/17	Complete Genome	Wonkwang University	SAMN07160384	GCA_002158925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/158/925/GCA_002158925.1_ASM215892v1	-	4B15
Bacillus amyloliquefaciens	1390	PRJNA354206	354206	Terrabacteria group	Firmicutes	3.98939	46.7	chromosome:NZ_CP018152.1/CP018152.1	-	1	3982	3771	12/6/16	4/6/17	Complete Genome	HeNan University of Technology	SAMN06043296	GCA_001889285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/285/GCA_001889285.1_ASM188928v1	-	LM2303
Bacillus velezensis	492670	PRJNA315577	315577	Terrabacteria group	Firmicutes	3.92183	46.7	chromosome:NZ_CP014990.1/CP014990.1	-	1	3881	3612	10/6/16	3/22/17	Complete Genome	Chung-Ang Univiersity	SAMN04566106	GCA_001752685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/685/GCA_001752685.1_ASM175268v1	-	D2-2
Lactobacillus rhamnosus	47715	PRJEB12623	313758	Terrabacteria group	Firmicutes	3.02403	46.7	chromosome I:NZ_LT220504.1/LT220504.1	-	1	3042	2854	3/1/16	4/5/17	Complete Genome	Ferring International Center S.A.	SAMEA3879648	GCA_900070175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/070/175/GCA_900070175.1_Lactobacillus_rhamnosus_CECT_8800	-	BPL5
Desulfitobacterium hafniense	49338	PRJNA304467	304467	Terrabacteria group	Firmicutes	5.36494	47.5	-	LOCK01	104	5104	4890	12/17/15	4/4/17	Scaffold	"Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, 361021, P. R. China"	SAMN04302813	GCA_001468785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/785/GCA_001468785.1_ASM146878v1	26868389	DH
Salinispora tropica CNB536	1136431	PRJNA169771	169771	Terrabacteria group	Actinobacteria	5.55256	69.3	-	AZXD01	122	5197	4783	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597260	GCA_000515075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/075/GCA_000515075.1_ASM51507v1	-	CNB536
Aeromonas salmonicida subsp. salmonicida	29491	PRJNA264317	264317	Proteobacteria	Gammaproteobacteria	4.80617	58.4	-	JXTA01	133	4618	4131	2/24/15	4/5/17	Scaffold	Universite Laval	SAMN03295755	GCA_000931985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/985/GCA_000931985.2_ASM93198v2	-	JF3224
Streptococcus mitis	28037	PRJNA304333	304333	Terrabacteria group	Firmicutes	2.16925	39.8	-	LQOA01	24	2222	2013	3/2/16	4/5/17	Scaffold	University of Kaiserslautern	SAMN04325060	GCA_001579045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/045/GCA_001579045.1_ASM157904v1	27303717	DD28
Oenococcus oeni AWRIB419	1206770	PRJNA169939	169939	Terrabacteria group	Firmicutes	1.79321	37.8	-	ALAF01	46	1836	1673	8/9/12	3/23/17	Contig	The Australian Wine Research Institute	SAMN02471122	GCA_000286135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/135/GCA_000286135.1_AWRIB419_v1	22863143	AWRIB419
Candidatus Wolfebacteria bacterium GW2011_GWB1_47_1	1619007	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.984447	46.7	chromosome:CP011209.1	-	1	1071	1022	6/19/15	9/21/17	Complete Genome	"Banfield Lab, University of California, Berkeley"	SAMN03319901	GCA_001029635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/635/GCA_001029635.1_ASM102963v1	-	-
Bacillus amyloliquefaciens	1390	PRJNA280801	280801	Terrabacteria group	Firmicutes	3.90302	46.7	chromosome:NZ_CP011278.1/CP011278.1	-	1	3870	3662	4/20/15	4/3/17	Complete Genome	China Agricultural University	SAMN03470201	GCA_000973485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/485/GCA_000973485.1_ASM97348v1	-	L-S60
Bacillus amyloliquefaciens	1390	PRJNA271047	271047	Terrabacteria group	Firmicutes	3.90597	46.7	chromosome:NZ_CP010556.1/CP010556.1	-	1	3866	3666	2/5/15	4/3/17	Complete Genome	China Agricultural University	SAMN03272519	GCA_000833005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/005/GCA_000833005.1_ASM83300v1	-	L-H15
Bartonella bacilliformis Peru-18	1427331	PRJNA229740	229740	Proteobacteria	Alphaproteobacteria	1.39038	38.2	-	JHPR01	20	1214	1123	3/28/14	4/2/17	Scaffold	Broad Institute	SAMN02419801	GCA_000607245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/245/GCA_000607245.1_Bart_baci_Peru-18_V1	-	Peru-18
Bacillus amyloliquefaciens LFB112	1415165	PRJNA225659	225659	Terrabacteria group	Firmicutes	3.94275	46.7	chromosome:NC_023073.1/CP006952.1	-	1	3900	3684	12/16/13	4/2/17	Complete Genome	China agricultural university	SAMN02641487	GCA_000508265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/265/GCA_000508265.1_ASM50826v1	-	LFB112
Leptospira borgpetersenii serovar Hardjo	328971	PRJNA296675	296675	Spirochaetes	Spirochaetia	3.9678	40.584	chromosome 1:NZ_CP015044.1/CP015044.1; chromosome 2:NZ_CP015045.1/CP015045.1	-	2	3837	3192	4/11/16	4/5/17	Chromosome	INDICASAT-AIP	SAMN04102082	GCA_001618525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/525/GCA_001618525.1_ASM161852v1	26770734	BK-6
Bacillus velezensis UCMB5113	1150476	PRJEB1418	214809	Terrabacteria group	Firmicutes	3.88953	46.7	chromosome I:NC_022081.1/HG328254.1	-	1	3851	3656	8/9/13	4/10/17	Complete Genome	HGEN	SAMEA2272338	GCA_000455585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/585/GCA_000455585.1_ucmb5113v1	-	UCMB5113
Thermosphaera aggregans DSM 11486	633148	PRJNA36571	36571	TACK group	Crenarchaeota	1.31659	46.7	chromosome:NC_014160.1/CP001939.1	-	1	1426	1368	5/17/10	8/21/15	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598509	GCA_000092185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/185/GCA_000092185.1_ASM9218v1	21304709	DSM 11486
Lactobacillus rhamnosus GG	568703	PRJDA40637	40637	Terrabacteria group	Firmicutes	3.00505	46.7	chromosome:NC_017482.1/AP011548.1	-	1	3059	2859	9/26/09	3/29/17	Complete Genome	University of Tokyo	SAMD00060969	GCA_000011045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/045/GCA_000011045.1_ASM1104v1	"1,982,009,924,116,020"	ATCC 53103
Lactobacillus rhamnosus GG	568703	PRJEA32195	32195	Terrabacteria group	Firmicutes	3.01011	46.7	chromosome:NC_013198.1/FM179322.1	-	1	3062	2860	9/2/09	3/30/17	Complete Genome	"Institute of Biotechnology, University of Helsinki, Finland"	SAMEA2272375	GCA_000026505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/505/GCA_000026505.1_ASM2650v1	19805152	GG (ATCC 53103)
Bacillus velezensis	492670	PRJNA388298	388298	Terrabacteria group	Firmicutes	3.90007	46.6869	chromosome:NZ_CP021976.1/CP021976.1; plasmid unnamed:NZ_CP021977.1/CP021977.1	-	2	3909	3708	6/22/17	6/30/17	Complete Genome	Rural development administration	SAMN07248583	GCA_002205715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/715/GCA_002205715.1_ASM220571v1	-	T20E-257
Rhodopseudomonas palustris	1076	PRJNA261322	261322	Proteobacteria	Alphaproteobacteria	6.12396	64.2	-	JXXE01	906	6000	5439	3/2/15	4/3/17	Contig	Technical University of Denmark	SAMN03072170	GCA_000935205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/205/GCA_000935205.1_ASM93520v1	26152586	BAL398
Bacillus velezensis	492670	PRJEB12378	309401	Terrabacteria group	Firmicutes	3.86276	46.6865	chromosome BAMMD1:NZ_LN999829.1/LN999829.1; plasmid pBAMMD1:NZ_LN999830.1/LN999830.1	-	2	3791	3625	1/21/16	3/22/17	Complete Genome	Genoscope CEA	SAMEA3726545	GCA_001536925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/925/GCA_001536925.1_BMC_PRJEB12378v1	-	B25
Shigella boydii S6614	1212567	PRJNA171074	171074	Proteobacteria	Gammaproteobacteria	4.61067	51.2	-	AMJU01	479	5040	4119	1/6/15	8/4/17	Contig	Institute for Genome Sciences	SAMN03276467	GCA_000815585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/585/GCA_000815585.1_ASM81558v1	-	S6614
Vibrio vulnificus YJ016	196600	PRJNA1430	1430	Proteobacteria	Gammaproteobacteria	5.26009	46.6686	chromosome I:NC_005139.1/BA000037.2; chromosome II:NC_005140.1/BA000038.2; plasmid pYJ016:NC_005128.1/AP005352.1	-	3	4916	4662	10/1/03	3/29/17	Complete Genome	"NHRI, Taiwan"	SAMD00061075	GCA_000009745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/745/GCA_000009745.1_ASM974v1	14656965	YJ016
Leptolyngbya sp. NIES-3755	1752064	PRJDB4349	305597	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.76166	46.6565	chromosome Unknown:NZ_AP017308.1/AP017308.1; plasmid plasmid1:NZ_AP017309.1/AP017309.1; plasmid plasmid2:NZ_AP017310.1/AP017310.1; plasmid plasmid3:NZ_AP017311.1/AP017311.1	-	4	6603	6350	12/9/15	4/17/17	Complete Genome	Toyohashi University of Technology	SAMD00042786	GCA_001548435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/435/GCA_001548435.1_ASM154843v1	-	NIES-3755
Candidatus Pelagibacter ubique HTCC8051	466038	PRJNA182738	182738	Proteobacteria	Alphaproteobacteria	1.39502	29.2	-	AWZY01	1	1482	1440	9/30/13	4/10/17	Scaffold	DOE Joint Genome Institute	SAMN02440710	GCA_000472605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/605/GCA_000472605.1_ASM47260v1	-	HTCC8051
Mycoplasma genitalium G37	243273	PRJNA13924	13924	Terrabacteria group	Tenericutes	0.560035	31.4	-	AAGX01	25	549	346	6/1/05	4/7/17	Contig	454 Life Sciences Corporation	SAMN02363424	GCA_000167595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/595/GCA_000167595.1_ASM16759v1	16056220	G-37
Lactobacillus paracollinoides	240427	PRJNA290141	290141	Terrabacteria group	Firmicutes	3.74851	46.6469	chromosome:NZ_CP014924.1/CP014924.1; plasmid pL11995-1:NZ_CP014925.1/CP014925.1; plasmid pL11995-2:NZ_CP014926.1/CP014926.1; plasmid pL11995-3:NZ_CP014927.1/CP014927.1; plasmid pL11995-4:NZ_CP014928.1/CP014928.1; plasmid pL11995-5:NZ_CP014929.1/CP014929.1; plasmid pL11995-6:NZ_CP014930.1/CP014930.1; plasmid pL11995-7:NZ_CP014931.1/CP014931.1; plasmid pL11995-8:NZ_CP014932.1/CP014932.1	-	9	3413	3144	8/10/16	4/13/17	Complete Genome	Technische Universitaet Muenchen	SAMN04505737	GCA_001702195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/702/195/GCA_001702195.1_ASM170219v1	-	TMW 1.1995
Corynebacterium jeikeium	38289	PRJNA238244	238244	Terrabacteria group	Actinobacteria	2.33152	61.9	-	JFCF01	49	2068	1917	8/6/14	4/2/17	Contig	University of Washington	SAMN02641050	GCA_000738185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/185/GCA_000738185.1_Cj14566	-	Cj14566
Lactobacillus rhamnosus Lc 705	568704	PRJEA32197	32197	Terrabacteria group	Firmicutes	3.03311	46.6319	chromosome:NC_013199.1/FM179323.1; plasmid pLC1:NC_013200.1/FM179324.1	-	2	3054	2811	9/2/09	3/30/17	Complete Genome	"Institute of Biotechnology, University of Helsinki, Finland"	SAMEA2272728	GCA_000026525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/525/GCA_000026525.1_ASM2652v1	19805152	Lc 705
Desulfotalea psychrophila LSv54	177439	PRJNA12751	12751	Proteobacteria	delta/epsilon subdivisions	3.65963	46.6208	chromosome:NC_006138.1/CR522870.1; plasmid large:NC_006139.1/CR522871.1; plasmid small:NC_006140.1/CR522872.1	-	3	3305	3128	7/31/04	4/17/17	Complete Genome	e.gene Biotechnologie GmbH	SAMEA3138217	GCA_000025945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/945/GCA_000025945.1_ASM2594v1	-	LSv54
Zymomonas mobilis subsp. mobilis NCIMB 11163	622759	PRJNA34821	34821	Proteobacteria	Alphaproteobacteria	2.22352	46.6156	chromosome:NC_013355.1/CP001722.1; plasmid pZA1001:NC_013356.1/CP001723.1; plasmid pZA1002:NC_013357.1/CP001724.1; plasmid pZA1003:NC_013358.1/CP001725.1	-	4	1986	1882	9/15/09	3/30/17	Complete Genome	US DOE Joint Genome Institute	SAMN00113486	GCA_000024245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/245/GCA_000024245.1_ASM2424v1	19767433	NCIMB 11163
Thermus thermophilus ATCC 33923	1316935	PRJNA196548	196548	Terrabacteria group	Deinococcus-Thermus	2.14666	69.4	-	AQOS01	112	2343	2152	5/24/13	4/8/17	Contig	Nanjing University of Technology	SAMN02470567	GCA_000401495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/495/GCA_000401495.1_ASM40149v1	23887916	ATCC 33923
Vibrio vulnificus	672	PRJNA291949	291949	Proteobacteria	Gammaproteobacteria	5.22923	46.6096	chromosome 1:NZ_CP012739.1/CP012739.1; chromosome 2:NZ_CP012740.1/CP012740.1; plasmid unnamed:NZ_CP012741.1/CP012741.1	-	3	4915	4648	6/22/16	4/5/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN03956906	GCA_001675245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/245/GCA_001675245.1_ASM167524v1	27325916	FORC_017
Thalassolituus oleivorans	187493	PRJNA240964	240964	Proteobacteria	Gammaproteobacteria	3.9097	46.6	chromosome:NZ_CP017810.1/CP017810.1	-	1	3587	3474	12/30/16	9/18/17	Complete Genome	Institute of Genetics and Selection of Industrial Microorganisms	SAMN02687544	GCA_001932535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/535/GCA_001932535.1_ASM193253v1	-	K188
Bacillus velezensis	492670	PRJNA327161	327161	Terrabacteria group	Firmicutes	4.00745	46.6	chromosome:NZ_CP016395.1/CP016395.1	-	1	3989	3790	9/13/16	3/22/17	Complete Genome	National Institute of Agricultural Sciences	SAMN05323145	GCA_001723585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/585/GCA_001723585.1_ASM172358v1	-	M75
Lactobacillus paracasei	1597	PRJNA307294	307294	Terrabacteria group	Firmicutes	2.91889	46.6	chromosome:NZ_CP013921.1/CP013921.1	-	1	3095	2793	1/14/16	4/5/17	Complete Genome	Beijing University of Agriculture	SAMN04378089	GCA_001514415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/415/GCA_001514415.1_ASM151441v1	-	KL1
Campylobacter gracilis	824	PRJNA290037	290037	Proteobacteria	delta/epsilon subdivisions	2.28165	46.6	chromosome:NZ_CP012196.1/CP012196.1	-	1	2262	2167	8/3/15	4/10/17	Complete Genome	"USDA, ARS, WRRC"	SAMN03862076	GCA_001190745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/190/745/GCA_001190745.1_ASM119074v1	-	ATCC 33236
Bacillus velezensis NJN-6	1458206	PRJNA236411	236411	Terrabacteria group	Firmicutes	4.05255	46.6	chromosome:NZ_CP007165.1/CP007165.1	-	1	4031	3842	4/20/15	3/22/17	Complete Genome	Nanjing Agricultural University	SAMN03492032	GCA_000973585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/585/GCA_000973585.1_ASM97358v1	-	NJN-6
Ehrlichia ruminantium	779	PRJNA257008	257008	Proteobacteria	Alphaproteobacteria	1.48588	28.1	-	LUFS01	368	997	923	4/4/16	4/5/17	Contig	µFORGE	SAMN04335506	GCA_001608495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/495/GCA_001608495.1_ERUM001-SEQ-1-ASM-1	-	Palm River
Shewanella putrefaciens JCM 20190 = NBRC 3908	1236543	PRJDB632	243210	Proteobacteria	Gammaproteobacteria	4.32798	44.3	-	BALN01	49	-	-	4/1/14	7/24/15	Contig	The University of Tokyo	SAMD00004020	GCA_000615005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/005/GCA_000615005.1_ASM61500v1	-	JCM 20190
Bacillus amyloliquefaciens KHG19	1292358	PRJNA184846	184846	Terrabacteria group	Firmicutes	3.95336	46.6	chromosome:NZ_CP007242.1/CP007242.1	-	1	3899	3698	2/10/15	4/10/17	Complete Genome	Kyung Hee University	SAMN02680285	GCA_000835145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/835/145/GCA_000835145.1_ASM83514v1	-	KHG19
Shigella dysenteriae 4	1633494	PRJNA278281	278281	Proteobacteria	Gammaproteobacteria	4.53439	50.6	-	LAIG01	538	5114	4272	6/1/15	3/5/17	Contig	U.S. Food and Drug Administration	SAMN03421017	GCA_001017215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/215/GCA_001017215.1_ASM101721v1	25980352	BS1047
Anaplasma marginale str. Puerto Rico	517437	PRJNA29207	29207	Proteobacteria	Alphaproteobacteria	1.15853	49.8	-	ABOQ01	59	1035	865	1/30/09	3/30/17	Contig	Washington State University	SAMN02436659	GCA_000172495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/495/GCA_000172495.1_ASM17249v1	19134224	Puerto Rico
Thalassolituus oleivorans R6-15	1208320	PRJNA170393	170393	Proteobacteria	Gammaproteobacteria	3.76405	46.6	chromosome:NZ_CP006829.1/CP006829.1	-	1	3465	3350	2/26/14	4/9/17	Complete Genome	The Third Institute of State Oceanic Administration (SOA)	SAMN03081496	GCA_000582555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/555/GCA_000582555.1_ASM58255v1	-	R6-15
Thalassolituus oleivorans MIL-1	1298593	PRJEB1425	194507	Proteobacteria	Gammaproteobacteria	3.92033	46.6	chromosome:NC_020888.1/HF680312.1	-	1	3616	3514	3/14/13	4/8/17	Complete Genome	MPI BREMEN	SAMEA2272589	GCA_000355675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/675/GCA_000355675.1_ASM35567v1	23599290	MIL-1
Bacillus velezensis UCMB5036	1150475	PRJEB1155	190092	Terrabacteria group	Firmicutes	3.91032	46.6	chromosome:NC_020410.1/HF563562.1	-	1	3875	3691	2/21/13	4/10/17	Complete Genome	HGEN	SAMEA2272633	GCA_000341875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/875/GCA_000341875.1_ASM34187v1	-	UCMB5036
Bacillus velezensis AS43.3	1225788	PRJNA173409	173409	Terrabacteria group	Firmicutes	3.96137	46.6	chromosome:NC_019842.1/CP003838.1	-	1	3978	3669	12/12/12	9/4/17	Complete Genome	NCAUR-ARS-USDA	SAMN02603673	GCA_000319475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/475/GCA_000319475.1_ASM31947v1	25835027	AS43.3
Desulfotomaculum nigrificans CO-1-SRB	868595	PRJNA50757	50757	Terrabacteria group	Firmicutes	2.89226	46.6	chromosome:NC_015565.1/CP002736.1	-	1	2844	2647	5/23/11	9/4/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713626	GCA_000214435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/435/GCA_000214435.1_ASM21443v1	-	CO-1-SRB
Bacillus amyloliquefaciens IT-45	1091041	PRJNA73591	73591	Terrabacteria group	Firmicutes	3.93687	46.5876	chromosome:NC_020272.1/CP004065.1; plasmid pBA45-1:NC_020273.1/CP004119.1	-	2	3945	3735	2/13/13	4/1/17	Complete Genome	"Institut Rosell Lallemand, Inc."	SAMN02603349	GCA_000242855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/855/GCA_000242855.2_ASM24285v2	-	IT-45
Xanthomonas axonopodis pv. clitoriae	487828	PRJNA298607	298607	Proteobacteria	Gammaproteobacteria	5.02223	64.7	-	LOKA01	91	4517	4161	3/6/17	3/9/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN04145200	GCA_002019345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/345/GCA_002019345.1_ASM201934v1	-	LMG9045
Bacillus amyloliquefaciens	1390	PRJNA302594	302594	Terrabacteria group	Firmicutes	3.93593	46.5874	chromosome:NZ_CP014700.1/CP014700.1; plasmid unnamed:NZ_CP014701.1/CP014701.1	-	2	3925	3729	3/10/16	4/5/17	Complete Genome	Fondazione Edmund Mach	SAMN04275172	GCA_001586105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/105/GCA_001586105.1_ASM158610v1	-	S499
Lactobacillus paracasei subsp. paracasei JCM 8130	1226298	PRJDB478	231328	Terrabacteria group	Firmicutes	3.0178	46.562	chromosome:NZ_AP012541.1/AP012541.1; plasmid pLBPC-1:NZ_AP012542.1/AP012542.1; plasmid pLBPC-2:NZ_AP012543.1/AP012543.1	-	3	3198	2921	8/15/13	4/3/17	Complete Genome	Kyushu University	SAMD00010723	GCA_000829035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/035/GCA_000829035.1_ASM82903v1	24116025	JCM 8130
Lactobacillus paracasei ATCC 334	321967	PRJNA402	402	Terrabacteria group	Firmicutes	2.92433	46.5563	chromosome:NC_008526.1/CP000423.1; plasmid 1:NC_008502.1/CP000424.1	-	2	2922	2764	10/13/06	8/3/16	Complete Genome	"US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc."	SAMN02598528	GCA_000014525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/525/GCA_000014525.1_ASM1452v1	17030793	ATCC 334
Vibrio vulnificus	672	PRJNA312018	312018	Proteobacteria	Gammaproteobacteria	5.16313	46.5303	chromosome I:NZ_CP014636.1/CP014636.1; chromosome II:NZ_CP014637.1/CP014637.1; plasmid pR99:NZ_CP014638.1/CP014638.1	-	3	4872	4521	7/6/17	7/8/17	Complete Genome	National Health Research Institutes	SAMN04457466	GCA_002215135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/135/GCA_002215135.1_ASM221513v1	-	CECT 4999
Bacillus velezensis	492670	PRJNA401482	401482	Terrabacteria group	Firmicutes	3.98915	46.5	chromosome:CP023431.1	-	1	3888	3774	9/21/17	9/21/17	Complete Genome	Microbial Institute for Fermentation Industry	SAMN07606138	GCA_002327165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/165/GCA_002327165.1_ASM232716v1	-	SCGB 574
Lactobacillus paracasei	1597	PRJNA349108	349108	Terrabacteria group	Firmicutes	2.94254	46.5	chromosome:NZ_CP017716.1/CP017716.1	-	1	3014	2776	8/16/17	8/17/17	Complete Genome	Tianjin University of Science and Tecnology	SAMN05921089	GCA_002257625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/625/GCA_002257625.1_ASM225762v1	-	TK1501
Bacillus velezensis	492670	PRJNA395123	395123	Terrabacteria group	Firmicutes	3.97938	46.5	chromosome:NZ_CP022531.1/CP022531.1	-	1	3977	3720	7/31/17	8/3/17	Complete Genome	Tianjin science and technology plan projects 17YFZCNC00430	SAMN07371515	GCA_002237515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/515/GCA_002237515.1_ASM223751v1	-	TB1501
Bacillus velezensis	492670	PRJNA361322	361322	Terrabacteria group	Firmicutes	3.92976	46.5	chromosome:NZ_CP021495.1/CP021495.1	-	1	3921	3677	6/13/17	6/15/17	Complete Genome	"Shandong Agricultural University, college of life science"	SAMN06231161	GCA_002192235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/235/GCA_002192235.1_ASM219223v1	-	GQJK49
Bacillus velezensis	492670	PRJNA383101	383101	Terrabacteria group	Firmicutes	3.92271	46.5	chromosome:NZ_CP021338.1/CP021338.1	-	1	3966	3770	5/24/17	6/15/17	Complete Genome	"College of Plant Protection, Nanjing Agricultural University"	SAMN06759456	GCA_002157265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/265/GCA_002157265.1_ASM215726v1	-	ZL918
Bacillus velezensis	492670	PRJNA282552	282552	Terrabacteria group	Firmicutes	3.92979	46.5	chromosome:NZ_CP011937.1/CP011937.1	-	1	3893	3679	5/2/17	5/6/17	Complete Genome	Chung-Ang University	SAMN03571282	GCA_002117165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/165/GCA_002117165.1_ASM211716v1	-	CBMB205
Agrobacterium tumefaciens P4	1300224	PRJNA191528	191528	Proteobacteria	Alphaproteobacteria	5.57094	58.4884	chromosome 1:NZ_CM002258.1/CM002258.1; chromosome 2:NZ_CM002259.1/CM002259.1; plasmid pA:NZ_CM002260.1/CM002260.1	APJV01	3	5356	5157	8/1/13	4/2/17	Chromosome	Institut des Sciences du vegetal	SAMN02472044	GCA_000442985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/985/GCA_000442985.1_AtP4V1.0	24092790	P4
Bacillus vallismortis	72361	PRJNA383078	383078	Terrabacteria group	Firmicutes	3.92979	46.5	chromosome:NZ_CP020893.1/CP020893.1	-	1	3892	3678	4/27/17	5/3/17	Complete Genome	Hubei Academy of Agricultural Sciences	SAMN06759033	GCA_002113805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/805/GCA_002113805.1_ASM211380v1	-	NBIF-001
Bacillus velezensis	492670	PRJNA379631	379631	Terrabacteria group	Firmicutes	3.92979	46.5	chromosome:NZ_CP020375.1/CP020375.1	-	1	3889	3656	3/27/17	3/30/17	Complete Genome	Shandong Agricultural University	SAMN06617410	GCA_002072695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/695/GCA_002072695.1_ASM207269v1	-	JTYP2
Bacillus velezensis	492670	PRJNA350878	350878	Terrabacteria group	Firmicutes	3.92652	46.5	chromosome:NZ_CP018007.1/CP018007.1	-	1	3891	3667	3/21/17	3/23/17	Complete Genome	Beijing Academy of Agricultural And Forestry Sciences	SAMN05949245	GCA_002057535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/535/GCA_002057535.1_ASM205753v1	-	sx01604
Bacillus amyloliquefaciens	1390	PRJNA354791	354791	Terrabacteria group	Firmicutes	3.92979	46.5	chromosome:NZ_CP018200.1/CP018200.1	-	1	3891	3670	12/27/16	4/6/17	Complete Genome	Hebei Academy of Science	SAMN06051297	GCA_001922005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/005/GCA_001922005.1_ASM192200v1	-	WS-8
Bacillus velezensis	492670	PRJNA322716	322716	Terrabacteria group	Firmicutes	3.91776	46.5	chromosome:NZ_CP015911.1/CP015911.1	-	1	3870	3678	7/20/16	3/22/17	Complete Genome	"State Key Laboratory of Agricultural  Microbiology, Huazhong Agricultural University"	SAMN05172932	GCA_001687745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/745/GCA_001687745.1_ASM168774v1	-	LS69
Actinobacillus pleuropneumoniae serovar 2 str. S1536	871925	PRJNA47293	47293	Proteobacteria	Gammaproteobacteria	2.21872	41.1	-	ADOE01	56	2122	2011	9/13/10	3/30/17	Contig	Huazhong Agricultural University	SAMN02469622	GCA_000178515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/515/GCA_000178515.1_ASM17851v1	20802045	S1536
Bacillus velezensis	492670	PRJNA318322	318322	Terrabacteria group	Firmicutes	3.92977	46.5	chromosome:NZ_CP016371.1/CP016371.1	-	1	3889	3677	7/15/16	3/22/17	Complete Genome	Shanghai Normal University	SAMN04816858	GCA_001685645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/645/GCA_001685645.1_ASM168564v1	-	S3-1
Bacillus amyloliquefaciens	1390	PRJNA315324	315324	Terrabacteria group	Firmicutes	4.00675	46.5	chromosome:NZ_CP014783.1/CP014783.1	-	1	3966	3759	3/23/16	4/5/17	Complete Genome	China national research institute of food&fermentation industries	SAMN04555582	GCA_001596755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/755/GCA_001596755.1_ASM159675v1	-	B15
Bacillus amyloliquefaciens UMAF6614	1434324	PRJNA230904	230904	Terrabacteria group	Firmicutes	4.00514	46.5	chromosome:NZ_CP006960.1/CP006960.1	-	1	3947	3754	3/18/16	4/5/17	Complete Genome	CBGP	SAMN04565866	GCA_001593785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/785/GCA_001593785.1_ASM159378v1	26035127	UMAF6614
Prevotella enoeca	76123	PRJNA282954	282954	FCB group	Bacteroidetes/Chlorobi group	2.86143	46.5	chromosome:NZ_CP013195.1/CP013195.1	-	1	2494	2381	11/17/15	4/11/17	Complete Genome	The Forsyth Institute	SAMN04260158	GCA_001444445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/445/GCA_001444445.1_ASM144444v1	-	F0113
Kingella kingae	504	PRJEB9502	301577	Proteobacteria	Betaproteobacteria	2.14006	46.5	chromosome I:LN869922.1	-	1	2324	2229	11/10/15	11/10/15	Complete Genome	"INSERM, IAME, UMR 1137"	SAMEA3477627	GCA_001458475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/475/GCA_001458475.1_KKKWG1	-	KWG1
Escherichia coli UMN026	585056	PRJNA33415	33415	Proteobacteria	Gammaproteobacteria	5.3582	50.6405	chromosome:NC_011751.1/CU928163.2; plasmid p1ESCUM:NC_011749.1/CU928148.1; plasmid p2ESCUM:NC_011739.1/CU928149.1	-	3	5301	5017	12/17/08	8/29/17	Chromosome	Genoscope	SAMEA3138233	GCA_000026325.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/325/GCA_000026325.2_ASM2632v2	-	UMN026
Bacillus velezensis	492670	PRJNA284876	284876	Terrabacteria group	Firmicutes	4.00975	46.5	chromosome:NZ_CP011686.1/CP011686.1	-	1	3995	3766	6/10/15	9/21/17	Complete Genome	Pusan National University	SAMN03733934	GCA_001023595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/595/GCA_001023595.1_ASM102359v1	-	G341
Corynebacterium kutscheri	35755	PRJNA276037	276037	Terrabacteria group	Actinobacteria	2.35406	46.5	chromosome:NZ_CP011312.1/CP011312.1	-	1	2121	1997	4/24/15	4/17/17	Complete Genome	Bielefeld University	SAMN03365283	GCA_000980835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/835/GCA_000980835.1_ASM98083v1	26021937	DSM 20755
Bacillus sp. Pc3	1446792	PRJNA271045	271045	Terrabacteria group	Firmicutes	3.98217	46.5	chromosome:NZ_CP010406.1/CP010406.1	-	1	3942	3756	1/6/15	4/10/17	Complete Genome	"Third Institute of Oceanography, State Oceanic Administration"	SAMN03272513	GCA_000815145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/145/GCA_000815145.1_ASM81514v1	-	Pc3
Tropheryma whipplei str. Endo32	1293897	PRJEB1443	189640	Terrabacteria group	Actinobacteria	0.927567	46.3	-	CAAH02	1	863	775	3/26/13	4/2/17	Scaffold	URMITE	SAMEA2272623	GCA_000359165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/165/GCA_000359165.2_G159	-	Endo32
Bacillus subtilis	1423	PRJNA259307	259307	Terrabacteria group	Firmicutes	3.98167	46.5	chromosome:NZ_CP009611.1/CP009611.1	-	1	3918	3722	11/5/14	3/25/17	Complete Genome	Jiangsu Academy of Agricultural Sciences	SAMN03009557	GCA_000772205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/205/GCA_000772205.1_ASM77220v1	25362061	Bs-916
Flammeovirgaceae bacterium 311	1257021	PRJNA178928	178928	FCB group	Bacteroidetes/Chlorobi group	6.66562	46.5	chromosome:NZ_CP004371.1/CP004371.1	-	1	5468	5333	3/19/14	4/9/17	Complete Genome	BGI	SAMN05771114	GCA_000597885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/885/GCA_000597885.1_ASM59788v1	-	311
Bacillus velezensis TrigoCor1448	1449088	PRJNA234772	234772	Terrabacteria group	Firmicutes	3.9579	46.5	chromosome:NZ_CP007244.1/CP007244.1	-	1	3897	3721	2/28/14	9/19/17	Complete Genome	Novozymes	SAMN02650943	GCA_000583065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/065/GCA_000583065.1_ASM58306v1	-	TrigoCor1448
Bacillus amyloliquefaciens CC178	1412898	PRJNA224754	224754	Terrabacteria group	Firmicutes	3.91683	46.5	chromosome:NC_022653.1/CP006845.1	-	1	3891	3702	11/1/13	4/2/17	Complete Genome	"National Academy of Agricultural Science, RDA"	SAMN02603639	GCA_000494835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/835/GCA_000494835.1_ASM49483v1	25573933	CC178
Thermofilum adornatus	1365176	PRJNA212068	212068	TACK group	Crenarchaeota	1.75026	46.5	chromosome:NC_022093.1/CP006646.1	-	1	1881	1825	8/13/13	9/6/17	Complete Genome	Baltic Federal University	SAMN02602995	GCA_000446015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/015/GCA_000446015.1_ASM44601v1	24029764	-
Bacillus velezensis CAU B946	1114958	PRJEA76795	76795	Terrabacteria group	Firmicutes	4.01986	46.5	chromosome:NC_016784.1/HE617159.1	-	1	4024	3792	1/9/12	4/10/17	Complete Genome	"Center for Biotechnology, Bielefeld University"	SAMEA2272738	GCA_000283695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/695/GCA_000283695.1_ASM28369v1	22408246	CAU B946
Bacillus coagulans 36D1	345219	PRJNA15679	15679	Terrabacteria group	Firmicutes	3.55223	46.5	chromosome:NC_016023.1/CP003056.1	-	1	3480	3254	9/23/11	3/30/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00623030	GCA_000169195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/195/GCA_000169195.2_ASM16919v2	22675583	36D1
Bacillus velezensis FZB42	326423	PRJNA13403	13403	Terrabacteria group	Firmicutes	3.91859	46.5	chromosome:NC_009725.1/CP000560.1	-	1	3892	3687	8/1/07	4/10/17	Complete Genome	Competence Network	SAMN02603158	GCA_000015785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/785/GCA_000015785.1_ASM1578v1	17704766	FZB42
Bacillus amyloliquefaciens	1390	PRJNA301202	301202	Terrabacteria group	Firmicutes	3.97993	46.4873	chromosome:NZ_CP013727.1/CP013727.1; plasmid Unnamed 1:NZ_CP013728.1/CP013728.1	-	2	3961	3734	1/4/16	4/5/17	Complete Genome	Kangwon national university	SAMN04244584	GCA_001483885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/483/885/GCA_001483885.1_ASM148388v1	-	MBE1283
Lactobacillus paracasei N1115	1446494	PRJNA234304	234304	Terrabacteria group	Firmicutes	3.06428	46.4634	chromosome:NZ_CP007122.1/CP007122.1; plasmid unnamed_1:NZ_CP007123.1/CP007123.1; plasmid unnamed_2:NZ_CP007124.1/CP007124.1; plasmid unnamed_3:NZ_CP007125.1/CP007125.1; plasmid unnamed_4:NZ_CP007126.1/CP007126.1	-	5	3263	2952	2/14/14	4/2/17	Complete Genome	"Shijiazhuang Junlebao Dairy Co., Ltd"	SAMN03081525	GCA_000582665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/665/GCA_000582665.1_ASM58266v1	24625864	N1115
Bacteroides salanitronis DSM 18170	667015	PRJNA40055	40055	FCB group	Bacteroidetes/Chlorobi group	4.30866	46.4428	chromosome:NC_015164.1/CP002530.1; plasmid pBACSA01:NC_015165.1/CP002531.1; plasmid pBACSA02:NC_015168.1/CP002532.1; plasmid pBACSA03:NC_015166.1/CP002533.1	-	4	3809	3626	2/28/11	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713589	GCA_000190575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/575/GCA_000190575.1_ASM19057v1	21677856	DSM 18170
Runella slithyformis DSM 19594	761193	PRJNA49125	49125	FCB group	Bacteroidetes/Chlorobi group	6.91973	46.4335	chromosome:NC_015703.1/CP002859.1; plasmid pRUNSL01:NC_015693.1/CP002860.1; plasmid pRUNSL02:NC_015704.1/CP002861.1; plasmid pRUNSL03:NC_015694.1/CP002862.1; plasmid pRUNSL04:NC_015705.1/CP002863.1; plasmid pRUNSL05:NC_015695.1/CP002864.1	-	6	5869	5744	6/17/11	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02232050	GCA_000218895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/895/GCA_000218895.1_ASM21889v1	22768358	DSM 19594
Lactobacillus casei str. Zhang	498216	PRJNA28537	28537	Terrabacteria group	Firmicutes	2.89846	46.4194	chromosome:NC_014334.2/CP001084.2; plasmid plca36:NC_011352.1/CP000935.1	-	2	2936	2762	7/12/10	4/3/17	Complete Genome	"The Key Laboratory of Dairy Biotechnology and Bioengineering, Education Ministry of P. R. China, Department of Food Science and Engineering, Inner Mongolia Agricultural University, China"	SAMN02603933	GCA_000019245.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/245/GCA_000019245.3_ASM1924v3	"206,754,862,544,487,000,000,000"	Zhang
Lactobacillus pentosus	1589	PRJNA391376	391376	Terrabacteria group	Firmicutes	3.58301	46.4093	chromosome:NZ_CP022130.1/CP022130.1; plasmid pSLC13:NZ_CP022131.1/CP022131.1	-	2	3298	3069	6/30/17	7/3/17	Complete Genome	National Yang Ming University	SAMN07267280	GCA_002211885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/885/GCA_002211885.1_ASM221188v1	-	SLC13
Vibrio mimicus	674	PRJNA327733	327733	Proteobacteria	Gammaproteobacteria	4.48402	46.4016	chromosome 1:NZ_CP016383.1/CP016383.1; chromosome 2:NZ_CP016384.1/CP016384.1	-	2	4255	3948	10/18/16	4/5/17	Complete Genome	Sichuan Agricultural University	SAMN05356867	GCA_001767355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/355/GCA_001767355.1_ASM176735v1	-	SCCF01
Saprospira grandis str. Lewin	984262	PRJNA67697	67697	FCB group	Bacteroidetes/Chlorobi group	4.40018	46.4012	chromosome:NC_016940.1/CP002831.1; plasmid unnamed:NC_016936.1/CP002832.1	-	2	4051	3824	2/27/12	4/7/17	Complete Genome	"ASGPB, University of Hawaii at Manoa"	SAMN02602989	GCA_000250635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/635/GCA_000250635.1_ASM25063v1	22675601	Lewin
Bacillus velezensis	492670	PRJNA401481	401481	Terrabacteria group	Firmicutes	4.08549	46.4	chromosome:NZ_CP023320.1/CP023320.1	-	1	4144	3930	9/18/17	9/20/17	Complete Genome	Microbial Institute for Fermentation Industry	SAMN07606107	GCA_002310315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/315/GCA_002310315.1_ASM231031v1	-	SCGB 1
Bacillus velezensis	492670	PRJNA395642	395642	Terrabacteria group	Firmicutes	4.16257	46.4	chromosome:NZ_CP022654.2/CP022654.2	-	1	4266	4049	8/8/17	9/20/17	Complete Genome	Microbial Institute for Fermentation Industry	SAMN07411923	GCA_002243325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/325/GCA_002243325.2_ASM224332v2	-	SCDB 291
Bacillus velezensis	492670	PRJNA382661	382661	Terrabacteria group	Firmicutes	3.96373	46.4	chromosome:NZ_CP020805.1/CP020805.1	-	1	3946	3770	4/24/17	4/26/17	Complete Genome	Agriculture and Agri-Food Canada	SAMN06711603	GCA_002105595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/595/GCA_002105595.1_ASM210559v1	-	9D-6
Bacillus amyloliquefaciens	1390	PRJNA352297	352297	Terrabacteria group	Firmicutes	3.95716	46.4	chromosome:NZ_CP017953.1/CP017953.1	-	1	3964	3741	11/10/16	4/5/17	Complete Genome	Shandong Agricultural University	SAMN05969227	GCA_001874385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/385/GCA_001874385.1_ASM187438v1	-	Y14
Bacillus velezensis	492670	PRJNA344371	344371	Terrabacteria group	Firmicutes	3.88443	46.4	chromosome:NZ_CP017747.1/CP017747.1	-	1	3835	3652	10/26/16	4/10/17	Complete Genome	Jiangnan university	SAMN05821300	GCA_001854345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/345/GCA_001854345.1_ASM185434v1	162125	SYBC H47
Nanohaloarchaea archaeon SG9	1737403	PRJNA296403	296403	DPANN group	Candidatus Nanohaloarchaeota	1.11857	46.4	chromosome:CP012986.1	-	1	1225	1183	10/12/16	10/12/16	Complete Genome	University of Maryland	SAMN04191486	GCA_001761425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/425/GCA_001761425.1_ASM176142v1	-	-
Bacillus velezensis	492670	PRJNA282557	282557	Terrabacteria group	Firmicutes	4.00664	46.4	chromosome:NZ_CP011347.1/CP011347.1	-	1	3935	3639	5/6/15	3/22/17	Complete Genome	Chung-Ang Univiersity	SAMN03571286	GCA_000988345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/345/GCA_000988345.1_ASM98834v1	-	YJ11-1-4
Bacillus sp. BH072	1570330	PRJNA266571	266571	Terrabacteria group	Firmicutes	4.06964	46.4	chromosome:NZ_CP009938.1/CP009938.1	-	1	4031	3838	1/21/15	4/10/17	Complete Genome	University of Groningen	SAMN03167799	GCA_000827045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/827/045/GCA_000827045.1_ASM82704v1	"2,354,535,425,767,230"	BH072
Thermofilum carboxyditrophus 1505	697581	PRJNA237279	237279	TACK group	Crenarchaeota	1.75419	46.4	chromosome:NZ_CP007493.1/CP007493.1	-	1	1909	1849	1/2/15	8/20/15	Complete Genome	Centre Bioengineering RAS	SAMN03274240	GCA_000813245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/245/GCA_000813245.1_ASM81324v1	-	1505
Thermotoga sp. Cell2	1157947	PRJNA86989	86989	Thermotogae	Thermotogae	1.7499	46.4	chromosome:NZ_CP003409.1/CP003409.1	-	1	1823	1631	12/4/14	4/9/17	Complete Genome	University of Alberta	SAMN03143096	GCA_000789375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/375/GCA_000789375.1_ASM78937v1	-	Cell2
Tropheryma whipplei str. Slow2	1294027	PRJEB1444	189641	Terrabacteria group	Actinobacteria	0.927621	46.3	-	CAAO02	1	858	760	3/26/13	4/2/17	Scaffold	URMITE	SAMEA2271947	GCA_000359185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/185/GCA_000359185.2_G160	-	Slow2
Bacillus subtilis	1423	PRJNA259686	259686	Terrabacteria group	Firmicutes	3.9599	46.4	chromosome:NZ_CP009749.1/CP009749.1	-	1	3865	3686	11/5/14	3/25/17	Complete Genome	Jiangxi Normal University	SAMN03010507	GCA_000772165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/165/GCA_000772165.1_ASM77216v1	-	ATCC 19217
Candidatus Hodgkinia cicadicola	573658	PRJNA246493	246493	Proteobacteria	Alphaproteobacteria	0.150297	46.4	chromosome:CP008699.1	-	1	194	170	6/9/14	10/17/14	Complete Genome	University of Montana	SAMN02801810	GCA_000699475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/475/GCA_000699475.1_ASM69947v1	-	-
Lactobacillus casei 12A	1051650	PRJNA68455	68455	Terrabacteria group	Firmicutes	2.90789	46.4	chromosome:NZ_CP006690.1/CP006690.1	-	1	2992	2801	5/8/14	4/2/17	Complete Genome	University of Wisconsin-Madison and Utah State University	SAMN02472008	GCA_000309565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/565/GCA_000309565.2_ASM30956v2	23035691	12A
Syntrophobotulus glycolicus DSM 8271	645991	PRJNA38111	38111	Terrabacteria group	Firmicutes	3.40674	46.4	chromosome:NC_015172.1/CP002547.1	-	1	3395	3264	3/1/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00216969	GCA_000190635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/635/GCA_000190635.1_ASM19063v1	21886864	DSM 8271
Bacillus velezensis	492670	PRJNA392845	392845	Terrabacteria group	Firmicutes	4.02069	46.3886	chromosome:NZ_CP022341.1/CP022341.1; plasmid p1-157:NZ_CP022342.1/CP022342.1; plasmid p2-157:NZ_CP022343.1/CP022343.1	-	3	3982	3790	7/12/17	7/14/17	Complete Genome	Jilin Agricultural University	SAMN07311555	GCA_002216755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/755/GCA_002216755.1_ASM221675v1	-	157
Vibrio mimicus	674	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.43869	46.3875	chromosome 1:NZ_CP014042.1/CP014042.1; chromosome 2:NZ_CP014043.1/CP014043.1	-	2	4274	3909	2/11/16	4/4/17	Complete Genome	US Food and Drug Administration 	SAMN03996328	GCA_001558475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/475/GCA_001558475.1_ASM155847v1	-	ATCC 33654
Bacillus velezensis	492670	PRJNA263650	263650	Terrabacteria group	Firmicutes	4.01444	46.3872	chromosome:NZ_CP009679.1/CP009679.1; plasmid pBMJS25R:NZ_CP009680.1/CP009680.1	-	2	3953	3776	10/28/14	3/22/17	Complete Genome	"Institute of Agro-products Processing Science and Technology, Chinese Academy of Agricultural Sciences"	SAMN03104819	GCA_000769555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/555/GCA_000769555.1_ASM76955v1	-	JS25R
Shewanella sp. FDAARGOS_354	1930557	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.06977	46.3767	chromosome:NZ_CP022089.1/CP022089.1; plasmid unnamed1:NZ_CP022090.1/CP022090.1	-	2	4559	4149	6/27/17	6/29/17	Complete Genome	US Food and Drug Administration 	SAMN06173367	GCA_002209245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/245/GCA_002209245.1_ASM220924v1	-	FDAARGOS_354
Lactobacillus casei LC2W	999378	PRJNA64433	64433	Terrabacteria group	Firmicutes	3.07743	46.3526	chromosome:NC_017473.1/CP002616.1; plasmid pLC2W:NC_017475.1/CP002617.1	-	2	3224	3002	4/1/11	3/30/17	Complete Genome	"State Key Laboratory of Dairy Biotechnology, Technology Center of Bright Dairy & Food Co., Ltd,China"	SAMN02603877	GCA_000194785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/785/GCA_000194785.1_ASM19478v1	21515769	LC2W
Actinobacillus pleuropneumoniae serovar 4 str. M62	754255	PRJNA47295	47295	Proteobacteria	Gammaproteobacteria	2.27118	41.2	-	ADOF01	89	2218	2088	9/13/10	3/30/17	Contig	Huazhong Agricultural University	SAMN02469616	GCA_000178535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/535/GCA_000178535.1_ASM17853v1	20802045	M62
Lactobacillus paracasei	1597	PRJNA290442	290442	Terrabacteria group	Firmicutes	2.97335	46.3262	chromosome:NZ_CP012187.1/CP012187.1; plasmid unnamed1:NZ_CP012188.1/CP012188.1; plasmid unnamed2:NZ_CP012189.1/CP012189.1; plasmid unnamed3:NZ_CP012190.1/CP012190.1; plasmid unnamed4:NZ_CP012191.1/CP012191.1	-	5	3153	2777	8/3/15	4/3/17	Complete Genome	China Agricultural University	SAMN03892742	GCA_001191565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/565/GCA_001191565.1_ASM119156v1	-	CAUH35
Salimicrobium jeotgali	1230341	PRJNA282544	282544	Terrabacteria group	Firmicutes	2.77693	46.3069	chromosome:NZ_CP011361.2/CP011361.3; plasmid pSJ25:NZ_CP011363.1/CP011363.2; plasmid pSJ52:NZ_CP011362.1/CP011362.2	-	3	2838	2714	5/6/15	4/17/17	Complete Genome	Chung-Ang university	SAMN03571250	GCA_001685435.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/435/GCA_001685435.3_ASM168543v3	-	MJ3
Lactobacillus paracasei subsp. paracasei 8700:2	537973	PRJNA30077	30077	Terrabacteria group	Firmicutes	3.02535	46.3035	chromosome:NC_022112.1/CP002391.1; plasmid 1:NC_022114.1/CP002392.1; plasmid 2:NC_022123.1/CP002393.1	-	3	3134	2917	8/21/13	4/1/17	Complete Genome	Broad Institute	SAMN02463682	GCA_000155515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/515/GCA_000155515.2_ASM15551v2	-	8700:02:00
Bacillus sp. 1s-1	2026248	PRJNA398181	398181	Terrabacteria group	Firmicutes	4.16629	46.3	chromosome:NZ_CP022874.1/CP022874.1	-	1	4330	4116	8/24/17	8/27/17	Complete Genome	China University of Petroleum (East China)	SAMN07503201	GCA_002269275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/275/GCA_002269275.1_ASM226927v1	-	1s-1
Bacillus velezensis	492670	PRJNA389626	389626	Terrabacteria group	Firmicutes	4.00176	46.3	chromosome:CP021888.1	-	1	4111	3997	6/20/17	6/20/17	Complete Genome	Microbial Institute for Fermentation Industry	SAMN07204199	GCA_002201935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/935/GCA_002201935.1_ASM220193v1	-	SRCM100072
Agrobacterium tumefaciens	358	PRJNA272910	272910	Proteobacteria	Alphaproteobacteria	5.62222	59.2	-	JZLL01	97	5517	5173	3/31/15	4/3/17	Scaffold	Helmholtz Center Munich	SAMN03371638	GCA_000966435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/435/GCA_000966435.1_ASM96643v1	-	F4
Phycisphaerae bacterium ST-PulAB-D4	1941349	PRJNA369381	369381	PVC group	Planctomycetes	3.19229	46.3	chromosome:NZ_CP021023.1/CP021023.1	-	1	2459	2390	5/2/17	5/6/17	Complete Genome	Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures	SAMN06284595	GCA_002117005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/005/GCA_002117005.1_ASM211700v1	-	ST-PulAB-D4
Bacillus sp. H15-1	1856406	PRJNA355632	355632	Terrabacteria group	Firmicutes	4.1621	46.3	chromosome:NZ_CP018249.1/CP018249.1	-	1	4297	4023	12/9/16	4/16/17	Complete Genome	China University of Petroleum	SAMN06092843	GCA_001896025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/025/GCA_001896025.1_ASM189602v1	-	H15-1
Bacillus amyloliquefaciens	1390	PRJNA338085	338085	Terrabacteria group	Firmicutes	3.68821	46.3	chromosome:NZ_CP016913.1/CP016913.1	-	1	3734	3501	8/16/16	4/5/17	Complete Genome	National Academy of Agrigultural Science	SAMN05520945	GCA_001705195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/195/GCA_001705195.1_ASM170519v1	-	RD7-7
Bacillus amyloliquefaciens UMAF6639	1333538	PRJNA202869	202869	Terrabacteria group	Firmicutes	4.03464	46.3	chromosome:NZ_CP006058.1/CP006058.1	-	1	3955	3741	3/18/16	4/5/17	Complete Genome	CBGP	SAMN04565829	GCA_001593765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/765/GCA_001593765.1_ASM159376v1	26035127	UMAF6639
Lactobacillus paracasei	1597	PRJNA289435	289435	Terrabacteria group	Firmicutes	3.07644	46.3	chromosome:NZ_CP012148.1/CP012148.1	-	1	3169	2926	8/5/15	4/3/17	Complete Genome	China Agricultural University	SAMN03853751	GCA_001244395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/395/GCA_001244395.1_ASM124439v1	-	L9
Thermotoga maritima	2336	PRJNA279291	279291	Thermotogae	Thermotogae	1.85958	46.3	chromosome:NZ_CP010967.1/CP010967.1	-	1	1938	1864	4/22/15	4/10/17	Complete Genome	"University of Nebraska, Lincoln"	SAMN03372068	GCA_000978535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/978/535/GCA_000978535.1_ASM97853v1	26021931	Tma200
Bacillus coagulans	1398	PRJNA271049	271049	Terrabacteria group	Firmicutes	3.62464	46.3	chromosome:NZ_CP010525.1/CP010525.1	-	1	3599	3334	2/17/15	4/10/17	Complete Genome	Inner Mongolia Agricultural University	SAMN03272539	GCA_000876545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/545/GCA_000876545.1_ASM87654v1	-	HM-08
Lactobacillus casei BL23	543734	PRJEA30359	30359	Terrabacteria group	Firmicutes	3.0792	46.3	chromosome:NC_010999.1/FM177140.1	-	1	3236	3029	6/19/08	3/30/17	Complete Genome	Centre National de la Recherche Scientifique (C.N.R.S)	SAMEA2272724	GCA_000026485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/485/GCA_000026485.1_ASM2648v1	20348264	BL23
Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821	264203	PRJNA12354	12354	Proteobacteria	Alphaproteobacteria	2.05636	46.3	chromosome:NC_006526.2/AE008692.2	-	1	1830	1748	12/10/04	3/29/17	Complete Genome	Macrogen Inc.	SAMN02603579	GCA_000007105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/105/GCA_000007105.1_ASM710v1	"1,559,245,619,816,440"	ZM4
Tropheryma whipplei str. Twist	203267	PRJNA95	95	Terrabacteria group	Actinobacteria	0.927303	46.3	chromosome:NC_004572.3/AE014184.1	-	1	912	852	2/24/03	3/29/17	Complete Genome	Genoscope	SAMN02603248	GCA_000007485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/485/GCA_000007485.1_ASM748v1	12902375	Twist
Xanthomonas axonopodis pv. martyniicola	487833	PRJNA298600	298600	Proteobacteria	Gammaproteobacteria	4.92083	64.7	-	LOJX01	76	4422	4072	3/6/17	3/9/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN04145193	GCA_002019375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/375/GCA_002019375.1_ASM201937v1	-	LMG9049
Tropheryma whipplei TW08/27	218496	PRJNA354	354	Terrabacteria group	Actinobacteria	0.925938	46.3	chromosome:NC_004551.1/BX072543.1	-	1	906	846	2/18/03	3/30/17	Complete Genome	Sanger Institute	SAMEA1705925	GCA_000196075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/075/GCA_000196075.1_ASM19607v1	12606174	TW08/27
Bacillus sp. 275	1941347	PRJNA369455	369455	Terrabacteria group	Firmicutes	4.05197	46.2951	chromosome:NZ_CP019626.1/CP019626.1; plasmid unnamed:NZ_CP019627.1/CP019627.1	-	2	4004	3800	2/14/17	4/17/17	Complete Genome	Korea Research Institute of Standards and Science (KRISS)	SAMN06286449	GCA_001999205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/205/GCA_001999205.1_ASM199920v1	-	275
Shewanella baltica OS678	693973	PRJNA47019	47019	Proteobacteria	Gammaproteobacteria	5.36877	46.276	chromosome:NC_016901.1/CP002383.1; plasmid pSBAL67801:NC_016905.1/CP002384.1	-	2	4729	4502	12/21/10	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00016780	GCA_000178875.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/875/GCA_000178875.2_ASM17887v2	22328742	OS678
Shewanella baltica OS185	402882	PRJNA17643	17643	Proteobacteria	Gammaproteobacteria	5.31291	46.2593	chromosome:NC_009665.1/CP000753.1; plasmid pS18501:NC_009661.1/CP000754.1	-	2	4676	4436	7/10/07	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598398	GCA_000017325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/325/GCA_000017325.1_ASM1732v1	-	OS185
Bacteroides fragilis 3_1_12	457424	PRJNA32433	32433	FCB group	Bacteroidetes/Chlorobi group	5.53012	43.7	-	ABZX01	33	4912	4658	1/30/09	5/18/17	Scaffold	Broad Institute	SAMN02463689	GCA_000157015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/015/GCA_000157015.1_ASM15701v1	-	3_1_12
Lactobacillus casei W56	1215914	PRJEB219	178267	Terrabacteria group	Firmicutes	3.1321	46.2533	chromosome:NC_018641.1/HE970764.1; plasmid pW56:NC_020057.1/HE970765.1	-	2	3326	3010	9/14/12	3/31/17	Complete Genome	University of Vienna	SAMEA2271945	GCA_000318035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/035/GCA_000318035.1_ASM31803v1	23144392	W56
Anaplasma marginale str. Virginia	403779	PRJNA29209	29209	Proteobacteria	Alphaproteobacteria	1.15387	49.8	-	ABOR01	70	1041	818	1/30/09	3/30/17	Contig	Washington State University	SAMN02436662	GCA_000172515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/515/GCA_000172515.1_ASM17251v1	19134224	Virginia
Shigella dysenteriae SD1D	1353980	PRJNA210600	210600	Proteobacteria	Gammaproteobacteria	4.59209	50.7	-	AURX01	146	4810	4430	9/16/13	2/22/17	Scaffold	CSIR-IMTECH	SAMN02469677	GCA_000467245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/245/GCA_000467245.1_Shigella_dysenteriae_strain_SD1D	25028600	SD1D
Lactobacillus casei BD-II	998820	PRJNA64431	64431	Terrabacteria group	Firmicutes	3.12729	46.2523	chromosome:NC_017474.1/CP002618.1; plasmid pBD-II:NC_017476.1/CP002619.1	-	2	3298	3070	4/1/11	3/30/17	Complete Genome	"State Key Laboratory of Dairy Biotechnology, Technology Center of Bright Dairy & Food Co., Ltd,China"	SAMN02603876	GCA_000194765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/765/GCA_000194765.1_ASM19476v1	21478345	BD-II
Ehrlichia ruminantium	779	PRJDB4736	320920	Proteobacteria	Alphaproteobacteria	1.48117	27.5	-	BDDK01	34	992	915	5/3/16	4/5/17	Contig	Graduate School of Veterinary Medicine Hokkaido University	SAMD00050887	GCA_001686265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/265/GCA_001686265.1_ER_CSP_1.0	27313287	Crystal Springs
Shewanella baltica OS223	407976	PRJNA17985	17985	Proteobacteria	Gammaproteobacteria	5.35888	46.2523	chromosome:NC_011663.1/CP001252.1; plasmid pS22301:NC_011664.1/CP001253.1; plasmid pS22302:NC_011668.1/CP001254.1; plasmid pS22303:NC_011665.1/CP001255.1	-	4	4712	4449	12/15/08	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00623062	GCA_000021665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/665/GCA_000021665.1_ASM2166v1	-	OS223
Shewanella baltica OS155	325240	PRJNA13386	13386	Proteobacteria	Gammaproteobacteria	5.3429	46.2451	chromosome:NC_009052.1/CP000563.1; plasmid pSbal01:NC_009035.1/CP000564.1; plasmid pSbal02:NC_009036.1/CP000565.1; plasmid pSbal03:NC_009037.1/CP000566.1; plasmid pSbal04:NC_009038.1/CP000567.1	-	5	4794	4450	2/20/07	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598299	GCA_000015845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/845/GCA_000015845.1_ASM1584v1	-	OS155
Lactobacillus paracasei	1597	PRJNA315936	315936	Terrabacteria group	Firmicutes	3.24614	46.2225	chromosome:NZ_CP014985.1/CP014985.1; plasmid unnamed1:NZ_CP014986.1/CP014986.1; plasmid unnamed2:NZ_CP014987.1/CP014987.1; plasmid unnamed3:NZ_CP014988.1/CP014988.1	-	4	3372	3116	4/5/17	4/8/17	Complete Genome	Universiti Malaysia Sabah	SAMN04571918	GCA_002079285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/285/GCA_002079285.1_ASM207928v1	-	IIA
Pseudanabaena sp. PCC 7367	82654	PRJNA158713	158713	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.88568	46.2126	chromosome:NC_019701.1/CP003592.1; plasmid pPSE7367.01:NC_019690.1/CP003593.1	-	2	3976	3877	12/5/12	4/17/17	Complete Genome	JGI	SAMN02261336	GCA_000317065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/065/GCA_000317065.1_ASM31706v1	-	PCC 7367
Microcoleus sp. PCC 7113	1173027	PRJNA158839	158839	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.96651	46.2006	chromosome:NC_019738.1/CP003630.1; plasmid pMIC7113.01:NC_019739.1/CP003631.1; plasmid pMIC7113.02:NC_019760.1/CP003632.1; plasmid pMIC7113.03:NC_019740.1/CP003633.1; plasmid pMIC7113.04:NC_019761.1/CP003634.1; plasmid pMIC7113.05:NC_019741.1/CP003635.1; plasmid pMIC7113.06:NC_019742.1/CP003636.1; plasmid pMIC7113.07:NC_019762.1/CP003637.1; plasmid pMIC7113.08:NC_019743.1/CP003638.1	-	9	6623	6350	12/6/12	4/8/17	Complete Genome	JGI	SAMN02261351	GCA_000317515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/515/GCA_000317515.1_ASM31751v1	-	PCC 7113
Bacillus licheniformis	1402	PRJNA394931	394931	Terrabacteria group	Firmicutes	4.28772	46.2	chromosome:NZ_CP022477.1/CP022477.1	-	1	4494	4297	7/28/17	8/1/17	Complete Genome	University of Science and Technology	SAMN07367816	GCA_002236895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/236/895/GCA_002236895.1_ASM223689v1	-	BL-010
Thermus thermophilus	274	PRJNA348753	348753	Terrabacteria group	Deinococcus-Thermus	2.11131	68.7	-	DFSI01	126	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454518	GCA_002378905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/905/GCA_002378905.1_ASM237890v1	28894102	-
Bacillus velezensis	492670	PRJNA389632	389632	Terrabacteria group	Firmicutes	4.20919	46.2	chromosome:CP021890.1; plasmid pBV1413:CP021891.1	-	2	4564	4450	6/20/17	6/20/17	Complete Genome	Microbial Institute for Fermentation Industry	SAMN07204271	GCA_002201975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/975/GCA_002201975.1_ASM220197v1	-	SRCM101413
Phycisphaerae bacterium L21-RPul-D3	1940790	PRJNA369350	369350	PVC group	Planctomycetes	2.95161	46.2	chromosome:NZ_CP019633.1/CP019633.1	-	1	2360	2251	2/14/17	4/17/17	Complete Genome	Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures	SAMN06284442	GCA_001997385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/385/GCA_001997385.1_ASM199738v1	-	L21-RPul-D3
Bacillus coagulans	1398	PRJNA343340	343340	Terrabacteria group	Firmicutes	3.59908	46.2	chromosome:NZ_CP017888.1/CP017888.1	-	1	3574	3307	11/7/16	4/5/17	Complete Genome	 Beijing University of Agriculture	SAMN05817827	GCA_001870065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/065/GCA_001870065.1_ASM187006v1	-	BC-HY1
Corynebacterium jeikeium	38289	PRJNA238244	238244	Terrabacteria group	Actinobacteria	2.33217	61.7	-	JFCG01	49	2072	1937	8/6/14	4/2/17	Contig	University of Washington	SAMN02641051	GCA_000738195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/195/GCA_000738195.1_Cj16348	25116839	Cj16348
Metallosphaera sedula	43687	PRJNA289697	289697	TACK group	Crenarchaeota	2.19153	46.2	chromosome:NZ_CP012172.1/CP012172.1	-	1	2375	2297	8/12/15	4/3/17	Complete Genome	University of Nebraska-Lincoln	SAMN03857118	GCA_001266655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/655/GCA_001266655.1_ASM126665v1	26430052	ARS50-1
Candidatus Pelagibacter ubique HTCC7214	1400524	PRJNA219140	219140	Proteobacteria	Alphaproteobacteria	1.37506	29.2	-	JNIT01	1	1447	1401	6/11/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02841172	GCA_000701385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/385/GCA_000701385.1_ASM70138v1	-	HTCC7214
Metallosphaera sedula	43687	PRJNA289701	289701	TACK group	Crenarchaeota	2.19153	46.2	chromosome:NZ_CP012173.1/CP012173.1	-	1	2377	2298	8/12/15	4/4/17	Complete Genome	University of Nebraska-Lincoln	SAMN03857124	GCA_001266675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/675/GCA_001266675.1_ASM126667v1	26430052	ARS50-2
Metallosphaera sedula	43687	PRJNA289698	289698	TACK group	Crenarchaeota	2.19153	46.2	chromosome:NZ_CP012174.1/CP012174.1	-	1	2376	2298	8/12/15	4/3/17	Complete Genome	University of Nebraska-Lincoln	SAMN03857129	GCA_001266695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/695/GCA_001266695.1_ASM126669v1	26430052	ARS120-1
Shigella boydii S7334	1212570	PRJNA171077	171077	Proteobacteria	Gammaproteobacteria	4.71163	51	-	AMJX01	249	5224	4294	1/6/15	8/4/17	Contig	Institute for Genome Sciences	SAMN03276488	GCA_000815645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/645/GCA_000815645.1_ASM81564v1	-	S7334
Metallosphaera sedula	43687	PRJNA289699	289699	TACK group	Crenarchaeota	2.19153	46.2	chromosome:NZ_CP012175.1/CP012175.1	-	1	2376	2298	8/12/15	4/3/17	Complete Genome	University of Nebraska-Lincoln	SAMN03857133	GCA_001266715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/715/GCA_001266715.1_ASM126671v1	26430052	ARS120-2
Metallosphaera sedula	43687	PRJNA290374	290374	TACK group	Crenarchaeota	2.19153	46.2	chromosome:NZ_CP012176.1/CP012176.1	-	1	2379	2301	8/12/15	4/3/17	Complete Genome	University of Nebraska-Lincoln	SAMN03890864	GCA_001266735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/735/GCA_001266735.1_ASM126673v1	-	SARC-M1
Rhodobacter sphaeroides WS8N	992186	PRJNA63267	63267	Proteobacteria	Alphaproteobacteria	4.41779	69.1705	chromosome chrI:NZ_CM001161.1/CM001161.1; chromosome chrII:NZ_CM001162.1/CM001162.1; plasmid pWS8N_A:NZ_CM001163.1/CM001163.1; plasmid pWS8N_B:NZ_CM001164.1/CM001164.1	AFER01	4	4317	4164	5/6/11	5/19/17	Chromosome	University of Oxford	SAMN02471741	GCA_000212605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/212/605/GCA_000212605.1_ASM21260v1	21622735	WS8N
Bacillus coagulans	1398	PRJNA285520	285520	Terrabacteria group	Firmicutes	3.69484	46.2	chromosome:NZ_CP011939.1/CP011939.1	-	1	3641	3368	6/25/15	4/3/17	Complete Genome	Institute of Microbial Technology	SAMN03754657	GCA_001039495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/495/GCA_001039495.1_ASM103949v1	27258038	S-lac
Bacillus velezensis	492670	PRJNA282546	282546	Terrabacteria group	Firmicutes	4.10595	46.2	chromosome:NZ_CP011346.1/CP011346.1	-	1	4144	3937	5/4/15	3/22/17	Complete Genome	Chung-Ang University	SAMN03571251	GCA_000987825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/987/825/GCA_000987825.1_ASM98782v1	-	JJ-D34
Thermotoga maritima MSB8	243274	PRJNA279291	279291	Thermotogae	Thermotogae	1.86961	46.2	chromosome:NZ_CP011107.1/CP011107.1	-	1	1949	1876	4/22/15	4/10/17	Complete Genome	"University of Nebraska, Lincoln"	SAMN03437642	GCA_000978555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/978/555/GCA_000978555.1_ASM97855v1	-	MSB8
Thermotoga maritima	2336	PRJNA279291	279291	Thermotogae	Thermotogae	1.86961	46.2	chromosome:NZ_CP011108.1/CP011108.1	-	1	1949	1875	4/22/15	4/10/17	Complete Genome	"University of Nebraska, Lincoln"	SAMN03437827	GCA_000978575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/978/575/GCA_000978575.1_ASM97857v1	-	Tma100
Leptospira borgpetersenii serovar Hardjo	328971	PRJNA296677	296677	Spirochaetes	Spirochaetia	3.94909	40.4839	chromosome 1:NZ_CP015046.1/CP015046.1; chromosome 2:NZ_CP015047.1/CP015047.1	-	2	3860	3198	4/11/16	4/5/17	Chromosome	INDICASAT-AIP	SAMN04102083	GCA_001618565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/565/GCA_001618565.1_ASM161856v1	26770734	BK-9
Thermotoga sp. 2812B	1157948	PRJNA87043	87043	Thermotogae	Thermotogae	1.84373	46.2	chromosome:NZ_CP003408.1/CP003408.1	-	1	1902	1805	12/4/14	4/9/17	Complete Genome	University of Alberta	SAMN03013826	GCA_000789335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/335/GCA_000789335.1_ASM78933v1	-	2812B
Bartonella bacilliformis Hosp800-02	1293908	PRJNA189517	189517	Proteobacteria	Alphaproteobacteria	1.42942	38.2	-	ASIS01	16	1265	1156	6/17/14	4/3/17	Scaffold	Broad Institute	SAMN01921141	GCA_000709735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/735/GCA_000709735.1_Bart_baci_Hosp800-02_V1	-	Hosp800-02
Candidatus Hodgkinia cicadicola	573658	PRJNA237784	237784	Proteobacteria	Alphaproteobacteria	0.14057	46.2	chromosome:CP007233.1	-	1	184	140	3/7/14	5/1/17	Complete Genome	University of Montana	SAMN02801775	GCA_000831425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/425/GCA_000831425.1_ASM83142v1	-	-
Thermotoga maritima MSB8	243274	PRJNA63051	63051	Thermotogae	Thermotogae	1.86964	46.2	chromosome:NC_023151.1/CP007013.1	-	1	1947	1877	12/20/13	4/9/17	Complete Genome	JGI	SAMN02261406	GCA_000230655.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/655/GCA_000230655.3_ASM23065v3	-	MSB8
Bacillus velezensis UCMB5033	1338518	PRJEB3961	214831	Terrabacteria group	Firmicutes	4.07117	46.2	chromosome I:NC_022075.1/HG328253.1	-	1	4073	3892	8/9/13	4/10/17	Complete Genome	HGEN	SAMEA2272562	GCA_000455565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/565/GCA_000455565.1_ucmb5033v1	-	UCMB-5033
Oenococcus oeni AWRIB418	1206769	PRJNA169938	169938	Terrabacteria group	Firmicutes	1.83815	37.8	-	ALAE01	34	1868	1713	8/9/12	3/23/17	Contig	The Australian Wine Research Institute	SAMN02471126	GCA_000286155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/155/GCA_000286155.1_AWRIB418_v1	22863143	AWRIB418
Streptococcus mitis SK321	585202	PRJNA33353	33353	Terrabacteria group	Firmicutes	1.8737	40.1	-	AEDT01	40	1892	1774	9/24/10	3/30/17	Contig	University of Maryland Institute for Genome Sciences	SAMN00001433	GCA_000148505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/505/GCA_000148505.2_ASM14850v1	-	SK321
Aeromonas salmonicida	645	PRJNA264317	264317	Proteobacteria	Gammaproteobacteria	4.71023	58.5	-	JZTF01	118	4416	4073	12/15/15	4/5/17	Scaffold	Universite Laval	SAMN03395034	GCA_001481535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/535/GCA_001481535.2_ASM148153v2	26753691	Y47
Salinispora tropica CNB476	1137247	PRJNA169770	169770	Terrabacteria group	Actinobacteria	5.2398	69.5	-	AZXE01	100	4902	4602	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597261	GCA_000515095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/095/GCA_000515095.1_ASM51509v1	-	CNB476
Desulfitobacterium hafniense	49338	PRJEB6708	264037	Terrabacteria group	Firmicutes	5.6667	47.3	-	-	24	5490	5417	-	-	Scaffold	WUR	-	GCA_000944695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/695/GCA_000944695.1_assembly_v1	-	PCE-S
Thermotoga maritima MSB8	243274	PRJNA185601	185601	Thermotogae	Thermotogae	1.86961	46.2	chromosome:NC_021214.1/CP004077.1	-	1	1950	1877	5/13/13	4/8/17	Complete Genome	University of California San Diego	SAMN01919351	GCA_000390265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/265/GCA_000390265.1_ASM39026v1	23637642	MSB8
Sphaerochaeta pleomorpha str. Grapes	158190	PRJNA50049	50049	Spirochaetes	Spirochaetia	3.59085	46.2	chromosome:NC_016633.1/CP003155.1	-	1	3276	3192	12/5/11	4/7/17	Complete Genome	JGI	SAMN02261363	GCA_000236685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/685/GCA_000236685.1_ASM23668v1	-	Grapes
Thermotoga sp. RQ2	126740	PRJNA19543	19543	Thermotogae	Thermotogae	1.87769	46.2	chromosome:NC_010483.1/CP000969.1	-	1	1924	1836	3/18/08	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000279	GCA_000019625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/625/GCA_000019625.1_ASM1962v1	21952543	RQ2
Metallosphaera sedula DSM 5348	399549	PRJNA17447	17447	TACK group	Crenarchaeota	2.19152	46.2	chromosome:NC_009440.1/CP000682.1	-	1	2377	2298	4/25/07	3/30/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598389	GCA_000016605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/605/GCA_000016605.1_ASM1660v1	18083856	DSM 5348
Salinispora arenicola CNS744	1169168	PRJNA175174	175174	Terrabacteria group	Actinobacteria	5.74157	69.6	-	ARHA01	89	5253	4936	4/19/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441690	GCA_000375065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/065/GCA_000375065.1_ASM37506v1	-	CNS744
Bacillus licheniformis DSM 13 = ATCC 14580	279010	PRJNA13082	13082	Terrabacteria group	Firmicutes	4.22264	46.2	chromosome:NC_006322.1/AE017333.1	-	1	4385	4223	9/20/04	5/18/17	Complete Genome	Gottingen Genomics Laboratory	SAMN02603292	GCA_000008425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/425/GCA_000008425.1_ASM842v1	15383718	DSM 13
Bacillus licheniformis DSM 13 = ATCC 14580	279010	PRJNA12388	12388	Terrabacteria group	Firmicutes	4.2226	46.2	chromosome:NC_006270.3/CP000002.3	-	1	4382	4219	9/14/04	5/18/17	Complete Genome	Novozymes Biotech	SAMN02603685	GCA_000011645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/645/GCA_000011645.1_ASM1164v1	15461803	ATCC 14580; DSM 13
Ralstonia pickettii NBRC 102503	1218114	PRJDB287	172110	Proteobacteria	Betaproteobacteria	4.73306	64	-	BCPW01	52	4452	4296	1/26/16	4/4/17	Contig	National Institute of Technology and Evaluation	SAMD00045738	GCA_001544155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/155/GCA_001544155.1_ASM154415v1	-	NBRC 102503
Geobacillus stearothermophilus ATCC 12980	1366047	PRJNA212538	212538	Terrabacteria group	Firmicutes	2.63083	53.1	-	JYNW01	106	2899	2543	9/1/15	4/4/17	Scaffold	Bacillus Genetic Stock Center	SAMN03291237	GCA_001277805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/805/GCA_001277805.1_ASM127780v1	-	ATCC 12980
Thermotoga maritima MSB8	243274	PRJNA111	111	Thermotogae	Thermotogae	1.86072	46.2	chromosome:NC_000853.1/AE000512.1	-	1	1928	1858	6/1/99	8/3/16	Complete Genome	TIGR	SAMN02603986	GCA_000008545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/545/GCA_000008545.1_ASM854v1	10360571	MSB8
Photobacterium damselae	38293	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.45711	40.4	-	LZFH01	69	3979	3713	6/24/16	4/5/17	Contig	FDA/CFSAN	SAMN04507567	GCA_001676145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/145/GCA_001676145.1_ASM167614v1	-	GCSL-P85
Borrelia afzelii ACA-1	445986	PRJNA19841	19841	Spirochaetes	Spirochaetia	1.35382	27.9297	plasmid cp26:NC_011650.1/CP001250.1; plasmid cp32-1:NC_011647.1/CP001243.1; plasmid cp32-3:NC_011651.1/CP001237.1; plasmid cp32-4:NC_011649.1/CP001240.1; plasmid cp32-5:NC_011648.1/CP001248.1; plasmid lp17:NC_011789.1/CP001239.1; plasmid lp28-1:NC_011787.1/CP001238.1; plasmid lp28-2:NC_011788.1/CP001244.1; plasmid lp28-3:NC_011793.1/CP001241.1; plasmid lp28-4:NC_011791.1/CP001249.1; plasmid lp28-7:NC_011794.1/CP001242.1; plasmid lp32-10:NC_011790.1/CP001245.1; plasmid lp38:NC_011792.1/CP001246.1; plasmid lp54:NC_011786.1/CP001247.1	ABCU02	16	1385	1287	6/26/07	3/6/17	Contig	J. Craig Venter Institute	SAMN02436235	GCA_000170935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/935/GCA_000170935.2_ASM17093v2	22123755	ACA-1
Faecalibacterium prausnitzii SL3/3	657322	PRJNA39151	39151	Terrabacteria group	Firmicutes	3.21442	55.5	chromosome:FP929046.1	-	1	2816	2746	3/25/10	2/27/15	Chromosome	MetaHIT	SAMEA3138352	GCA_000209855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/209/855/GCA_000209855.1_ASM20985v1	-	SL3/3
Vibrio harveyi	669	PRJDB3995	290872	Proteobacteria	Gammaproteobacteria	5.79579	45.4	-	BBXN01	42	5334	5125	7/25/15	4/3/17	Scaffold	"Laboratory of Genome Science, Graduate School of Marine Science and Technology, Tokyo University of Marine Science and Technology"	SAMD00032033	GCA_001192695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/695/GCA_001192695.1_ASM119269v1	26383659	KC13.17.5
Bifidobacterium stercoris JCM 15918	1437612	PRJNA237576	237576	Terrabacteria group	Actinobacteria	2.29198	59.4	-	JDUX01	40	1935	1829	11/4/14	4/2/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442044	GCA_000771705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/705/GCA_000771705.1_JCM-15918	25658111	JCM 15918
Lactococcus garvieae 8831	913847	PRJNA59787	59787	Terrabacteria group	Firmicutes	2.08593	38	-	AFCD01	87	2071	1937	5/17/11	3/30/17	Contig	"Animal Health Department, Complutense University of Madrid"	SAMN02469657	GCA_000213885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/885/GCA_000213885.2_ASM21388v2	21685280	8831
Methylobacterium extorquens	408	PRJNA349477	349477	Proteobacteria	Alphaproteobacteria	5.70219	67.9	-	MNAO01	743	5627	3962	10/26/16	4/11/17	Contig	Hasselt University	SAMN05930817	GCA_001854495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/495/GCA_001854495.1_ASM185449v1	-	CP3
Shewanella baltica OS195	399599	PRJNA13389	13389	Proteobacteria	Gammaproteobacteria	5.54754	46.1909	chromosome:NC_009997.1/CP000891.1; plasmid pS19501:NC_009998.1/CP000892.1; plasmid pS19502:NC_009999.1/CP000893.1; plasmid pS19503:NC_010000.1/CP000894.1	-	4	4941	4708	11/21/07	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN00623061	GCA_000018765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/765/GCA_000018765.1_ASM1876v1	-	OS195
Methylobacterium radiotolerans	31998	PRJNA305084	305084	Proteobacteria	Alphaproteobacteria	6.95603	71.2	-	LQAN01	205	6624	6552	4/8/16	4/8/16	Contig	Griffith University	SAMN04357042	GCA_001617335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/335/GCA_001617335.1_ASM161733v1	-	NDB3P7
Orientia tsutsugamushi str. UT144	1441384	PRJNA232539	232539	Proteobacteria	Alphaproteobacteria	1.68919	30.7	-	LAOR01	229	1928	1043	3/27/15	4/3/17	Contig	IGS	SAMN02693794	GCA_000965195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/195/GCA_000965195.1_ASM96519v1	-	UT144
Lactobacillus casei LOCK919	1318635	PRJNA196824	196824	Terrabacteria group	Firmicutes	3.14337	46.1782	chromosome:NC_021721.1/CP005486.1; plasmid pLOCK919:NC_021722.1/CP005487.1	-	2	3276	3079	7/8/13	4/1/17	Complete Genome	IBB PAS	SAMN02603330	GCA_000418515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/515/GCA_000418515.1_ASM41851v1	24072862	LOCK919
Shewanella baltica BA175	693974	PRJNA49719	49719	Proteobacteria	Gammaproteobacteria	5.1994	46.1333	chromosome:NC_017571.1/CP002767.1; plasmid pSBAL17501:NC_017570.1/CP002768.1; plasmid pSBAL17502:NC_017572.1/CP002769.1	-	3	4572	4330	5/24/11	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00016994	GCA_000147735.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/735/GCA_000147735.3_ASM14773v3	22328742	BA175
Porphyromonas gingivalis	837	PRJNA245225	245225	FCB group	Bacteroidetes/Chlorobi group	2.44178	48.1	chromosome:NZ_CP007756.1/CP007756.1	-	1	2205	2038	8/14/14	4/2/17	Chromosome	University of Louisville	SAMN02732406	GCA_000739415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/415/GCA_000739415.1_ASM73941v1	25291768	HG66
Lactobacillus mucosae LM1	1130798	PRJNA80653	80653	Terrabacteria group	Firmicutes	2.43461	46.1307	chromosome:NZ_CP011013.1/CP011013.1; plasmid pLM1:NZ_CP011014.1/CP011014.1	-	2	2292	2123	3/11/15	4/3/17	Complete Genome	chunlab Inc.	SAMN02470226	GCA_000248095.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/095/GCA_000248095.3_ASM24809v3	22887668	LM1
Ureaplasma urealyticum serovar 11 str. ATCC 33695	526347	PRJNA19417	19417	Terrabacteria group	Tenericutes	0.886725	26.1	-	AAZS01	9	700	638	4/24/07	3/30/17	Contig	TIGR	SAMN02435857	GCA_000169935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/935/GCA_000169935.1_ASM16993v1	-	ATCC 33695
Zymomonas mobilis subsp. mobilis ATCC 29191	627344	PRJNA35035	35035	Proteobacteria	Alphaproteobacteria	2.00834	46.109	chromosome:NC_018145.1/CP003704.1; plasmid pZZ6.01:NC_018146.1/CP003705.1; plasmid pZZ6.02:NC_018147.1/CP003706.1; plasmid pZZ6.03:NC_018148.1/CP003707.1	-	4	1841	1686	7/13/12	3/30/17	Complete Genome	JGI	SAMN02261358	GCA_000277755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/755/GCA_000277755.1_ASM27775v1	23045486	ATCC 29191
Aliivibrio fischeri	668	PRJNA311605	311605	Proteobacteria	Gammaproteobacteria	4.17181	38.2	-	LTYV01	48	3787	3689	5/9/16	4/5/17	Contig	MIT	SAMN04486008	GCA_001640325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/325/GCA_001640325.1_ASM164032v1	27128997	KB1A98
Bacillus amyloliquefaciens	1390	PRJNA280245	280245	Terrabacteria group	Firmicutes	3.89752	46.1	chromosome:NZ_CP011252.1/CP011252.1	-	1	3974	3752	6/27/17	6/29/17	Complete Genome	Jiangnan University	SAMN03459122	GCA_002209305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/305/GCA_002209305.1_ASM220930v1	28112210	MT45
Zymomonas mobilis subsp. mobilis	120045	PRJNA384222	384222	Proteobacteria	Alphaproteobacteria	2.0458	46.1	chromosome:NZ_CP021053.1/CP021053.1	-	1	1804	1713	5/30/17	6/12/17	Complete Genome	Clark University	SAMN06830565	GCA_002158845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/158/845/GCA_002158845.1_ASM215884v1	-	NRRL B-1960
Bacillus subtilis	1423	PRJNA341928	341928	Terrabacteria group	Firmicutes	4.1179	46.1	chromosome:NZ_CP018295.1/CP018295.1	-	1	4118	3904	12/6/16	3/28/17	Complete Genome	Hebei Academy of Sciences	SAMN05912821	GCA_001889385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/385/GCA_001889385.1_ASM188938v1	-	J-5
Burkholderia multivorans	87883	PRJNA244059	244059	Proteobacteria	Betaproteobacteria	6.5053	67.3	-	JNLW01	3	6155	5884	9/23/14	4/2/17	Scaffold	Los Alamos National Laboratory	SAMN02839455	GCA_000756965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/965/GCA_000756965.1_BHV_1	25414490	DWS 42B-1
Sphingopyxis sp. LPB0140	1913578	PRJNA350760	350760	Proteobacteria	Alphaproteobacteria	2.53304	46.1	chromosome:NZ_CP018154.1/CP018154.1	-	1	2433	2371	12/5/16	4/16/17	Complete Genome	Korea University	SAMN05945924	GCA_001889025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/025/GCA_001889025.1_ASM188902v1	-	LPB0140
Treponema pallidum subsp. pallidum str. Mexico A	686990	PRJNA41401	41401	Spirochaetes	Spirochaetia	1.14004	52.8	chromosome:NC_018722.1/CP003064.1	-	1	1065	1002	10/9/12	3/30/17	Chromosome	Baylor College of Medicine	SAMN00004588	GCA_000304295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/295/GCA_000304295.1_ASM30429v1	23029591	Mexico A
Bacillus beveridgei	632773	PRJNA261240	261240	Terrabacteria group	Firmicutes	3.58227	46.1	chromosome:NZ_CP012502.1/CP012502.1	-	1	3424	3275	9/8/16	4/17/17	Complete Genome	University of Delaware	SAMN04011598	GCA_001721685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/685/GCA_001721685.1_ASM172168v1	-	MLTeJB
Ochrobactrum anthropi	529	PRJNA274439	274439	Proteobacteria	Alphaproteobacteria	4.90418	56	-	JYFX01	74	4752	4563	2/20/15	4/3/17	Scaffold	Goethe University	SAMN03328791	GCA_000878465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/465/GCA_000878465.1_ASM87846v1	25838481	ML7
Bacillus glycinifermentans	1664069	PRJEB13402	336149	Terrabacteria group	Firmicutes	4.60744	46.1	chromosome 1:NZ_LT603683.1/LT603683.1	-	1	4704	4337	8/2/16	4/13/17	Complete Genome	Evonik Nutrition & Care GmbH	SAMEA4348063	GCA_900093775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/775/GCA_900093775.1_EVONIK_BGLY	-	-
Clavibacter michiganensis	28447	PRJNA262011	262011	Terrabacteria group	Actinobacteria	3.11863	73.6	-	JROD01	57	2985	2888	11/18/14	4/2/17	Contig	Inner Mongolia Agricultural University	SAMN03079320	GCA_000785165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/165/GCA_000785165.1_ASM78516v1	25555737	CF11
Brucella canis str. Oliveri	1408887	PRJEB4803	226218	Proteobacteria	Alphaproteobacteria	3.31866	57.2364	chromosome I:NZ_HG803175.1/HG803175.1; chromosome II:NZ_HG803176.1/HG803176.1	-	2	3354	3133	1/23/14	4/2/17	Chromosome	UDEA	SAMEA3138887	GCA_000530495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/495/GCA_000530495.1_Oliveri	25820207	Oliveri
Bacillus velezensis	492670	PRJNA315173	315173	Terrabacteria group	Firmicutes	4.16715	46.1	chromosome:NZ_CP015443.1/CP015443.1	-	1	4128	3941	4/29/16	3/22/17	Complete Genome	NanJing University	SAMN04550342	GCA_001593395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/395/GCA_001593395.2_ASM159339v2	-	CC09
Bacillus velezensis SQR9	1423138	PRJNA227504	227504	Terrabacteria group	Firmicutes	4.11702	46.1	chromosome:NZ_CP006890.1/CP006890.1	-	1	4083	3902	5/8/14	3/22/17	Complete Genome	Nanjing Agricultural University	SAMN03081500	GCA_000685725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/725/GCA_000685725.1_ASM68572v1	26346121	SQR9
Bradyrhizobium japonicum USDA 4	1038864	PRJNA165323	165323	Proteobacteria	Alphaproteobacteria	8.73767	63.7	-	AXAF01	97	8235	7778	9/30/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02441125	GCA_000472725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/725/GCA_000472725.1_ASM47272v1	-	USDA 4
Microcystis aeruginosa PCC 9443	1160281	PRJEA88173	88173	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.18504	42.7	-	CAIJ01	221	5150	4545	5/28/12	3/31/17	Scaffold	Genoscope CEA	SAMEA2272253	GCA_000312185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/185/GCA_000312185.1_ASM31218v1	-	PCC 9443
Methanobrevibacter smithii TS146B	911119	PRJNA59645	59645	Euryarchaeota	Methanobacteria	1.7947	31.1	-	AELN01	43	1751	1570	2/17/11	3/30/17	Contig	Washington University in St.Louis	SAMN02436665	GCA_000189855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/855/GCA_000189855.2_ASM18985v2	21317366	TS146B
Bifidobacterium dentium	1689	PRJNA379831	379831	Terrabacteria group	Actinobacteria	2.57107	58.2	-	NAQE01	24	2168	2033	3/31/17	4/6/17	Contig	University of Parma	SAMN06621713	GCA_002075955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/955/GCA_002075955.1_Bbif1893B	-	1893B
Streptococcus dysgalactiae subsp. equisimilis	119602	PRJNA327242	327242	Terrabacteria group	Firmicutes	2.11738	39.4	-	MATZ01	81	2080	1970	7/9/16	4/5/17	Scaffold	The UT MD Anderson Cancer Center	SAMN05327341	GCA_001682815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/815/GCA_001682815.1_ASM168281v1	-	UT_4242_AB
Borrelia garinii IPT74	1408824	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.16641	28.1	-	AXZW01	371	1014	501	12/3/13	4/2/17	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378791	GCA_000500955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/955/GCA_000500955.1_BorGarIPT74	-	IPT74
Streptococcus mutans	1309	PRJNA270154	270154	Terrabacteria group	Firmicutes	2.09834	36.8	chromosome:NZ_CP021318.1/CP021318.1	-	1	2135	1969	5/22/17	5/24/17	Chromosome	Chosun University	SAMN03263582	GCA_002155285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/285/GCA_002155285.1_ASM215528v1	-	KCOM 1054 (= ChDC YM3)
beta proteobacterium CB	543913	PRJNA178293	178293	Proteobacteria	Betaproteobacteria	2.04572	46.1	chromosome:NC_020417.1/CP004348.1	-	1	2097	2030	2/28/13	9/10/17	Complete Genome	Nankai University	SAMN02641529	GCA_000342265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/265/GCA_000342265.1_ASM34226v1	23599288	CB
Bacillus amyloliquefaciens DSM 7	692420	PRJEA41719	41719	Terrabacteria group	Firmicutes	3.9802	46.1	chromosome:NC_014551.1/FN597644.1	-	1	4120	3870	9/23/10	3/30/17	Complete Genome	"Cebitec, Bielefeld University"	SAMEA2272088	GCA_000196735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/735/GCA_000196735.1_ASM19673v1	20817842	DSM 7
Thermotoga naphthophila RKU-10	590168	PRJNA33663	33663	Thermotogae	Thermotogae	1.80982	46.1	chromosome:NC_013642.1/CP001839.1	-	1	1871	1778	12/18/09	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598505	GCA_000025105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/105/GCA_000025105.1_ASM2510v1	-	RKU-10
Shewanella sediminis HAW-EB3	425104	PRJNA18789	18789	Proteobacteria	Gammaproteobacteria	5.51767	46.1	chromosome:NC_009831.1/CP000821.1	-	1	4818	4564	9/18/07	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598412	GCA_000018025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/025/GCA_000018025.1_ASM1802v1	-	HAW-EB3
Thermotoga petrophila RKU-1	390874	PRJNA17089	17089	Thermotogae	Thermotogae	1.82351	46.1	chromosome:NC_009486.1/CP000702.1	-	1	1868	1782	5/18/07	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598377	GCA_000016785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/785/GCA_000016785.1_ASM1678v1	19307556	RKU-1
Zymomonas mobilis subsp. mobilis ATCC 10988	555217	PRJNA30987	30987	Proteobacteria	Alphaproteobacteria	2.14346	46.0424	chromosome:NC_017262.1/CP002850.1; plasmid pZMOB01:NC_017180.1/CP002851.1; plasmid pZMOB02:NC_017183.1/CP002852.1; plasmid pZMOB03:NC_017181.1/CP002853.1; plasmid pZMOB04:NC_017184.1/CP002854.1; plasmid pZMOB05:NC_017182.1/CP002855.1; plasmid pZMOBP6:NC_017185.1/CP002856.1	-	7	1954	1823	6/13/11	3/30/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02232066	GCA_000175255.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/255/GCA_000175255.2_ASM17525v2	21725006	ATCC 10988
Ruminiclostridium thermocellum YS	1094188	PRJNA73891	73891	Terrabacteria group	Firmicutes	3.46437	39.1	-	AJGT01	100	3046	2918	3/21/12	3/30/17	Contig	ORNL	SAMN02470754	GCA_000255575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/575/GCA_000255575.2_ASM25557v2	22628515	YS
Lactobacillus brevis ATCC 367	387344	PRJNA404	404	Terrabacteria group	Firmicutes	2.34023	46.0393	chromosome:NC_008497.1/CP000416.1; plasmid 1:NC_008498.1/CP000417.1; plasmid 2:NC_008499.1/CP000418.1	-	3	2330	2180	10/13/06	3/29/17	Complete Genome	"US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc."	SAMN02598532	GCA_000014465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/465/GCA_000014465.1_ASM1446v1	17030793	ATCC 367
Comamonas testosteroni ATCC 11996	1009852	PRJNA66095	66095	Proteobacteria	Betaproteobacteria	5.41015	61.5	-	AHIL01	63	4955	4783	1/6/12	5/18/17	Contig	"Institute of Toxicology and Pharmacology for Natural Scientists, University Medical School, Schleswig-Holstein, Campus Kiel"	SAMN02470044	GCA_000241525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/525/GCA_000241525.2_ASM24152v2	22374961	ATCC 11996
Bacillus mycoides Rock3-17	526999	PRJNA29705	29705	Terrabacteria group	Firmicutes	5.71395	35.4	chromosome:NZ_CM000744.1/CM000744.1	ACMW01	1	12006	11348	4/30/09	6/15/17	Chromosome	Naval Medical Research Center	SAMN00727643	GCA_000161435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/435/GCA_000161435.1_ASM16143v1	22645259	Rock3-17
Yersinia frederiksenii	29484	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	5.00901	47.5	-	CQBO01	74	4636	4427	3/22/15	4/3/17	Scaffold	SC	SAMEA859886	GCA_001090165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/165/GCA_001090165.1_4821_6_2	-	22714/85
Yersinia kristensenii	28152	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.57742	47.4	-	CQDL01	85	4227	4029	3/22/15	4/3/17	Scaffold	SC	SAMEA859963	GCA_001085865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/865/GCA_001085865.1_4821_5_6	-	FCF324
Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456	500634	PRJNA28655	28655	Terrabacteria group	Actinobacteria	2.20125	62.7	-	AWSW01	27	1902	1713	9/12/13	4/2/17	Scaffold	Washington University Genome Sequencing Center	SAMN02436821	GCA_000466525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/525/GCA_000466525.1_ASM46652v1	-	ATCC 29521
Alteromonas macleodii	28108	PRJNA269560	269560	Proteobacteria	Gammaproteobacteria	4.62301	44.6	-	JWLX01	35	3990	3886	12/29/14	4/2/17	Contig	University of Malaya	SAMN03254452	GCA_000808595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/595/GCA_000808595.1_ASM80859v1	-	AD006
Micrococcus luteus	1270	PRJNA239287	239287	Terrabacteria group	Actinobacteria	2.61238	73	-	JFYQ01	110	2410	2246	4/14/14	4/2/17	Contig	Monash University Malaysia	SAMN02676625	GCA_000632185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/185/GCA_000632185.1_Willow_Endophyte_RIT305	24812212	RIT305
Streptococcus equi subsp. ruminatorum CECT 5772	1051981	PRJNA217363	217363	Terrabacteria group	Firmicutes	2.13829	41.4	-	AWEX01	117	2057	1866	6/13/14	3/24/17	Contig	Cornell University	SAMN02951929	GCA_000706805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/805/GCA_000706805.1_ASM70680v1	24625962	CECT 5772
Helicobacter pullorum	35818	PRJNA326724	326724	Proteobacteria	delta/epsilon subdivisions	1.86285	34.1	-	MAJF01	139	1881	1744	8/4/16	4/5/17	Contig	University of Hyderabad	SAMN05292879	GCA_001698675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/675/GCA_001698675.1_ASM169867v1	-	NAP11B31
Bacillus licheniformis	1402	PRJNA293178	293178	Terrabacteria group	Firmicutes	4.40534	46	chromosome:NZ_CP014794.1/CP014794.1	-	1	4575	4342	3/29/17	4/1/17	Complete Genome	Chonbuk National University	SAMN03998369	GCA_002074135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/135/GCA_002074135.1_ASM207413v1	-	SCCB 37
Sulfolobus solfataricus 98/2	555311	PRJNA33849	33849	TACK group	Crenarchaeota	2.68047	35.2	-	ACUK01	506	2887	2619	7/20/09	3/30/17	Contig	Washington State University	SAMN00001854	GCA_000175555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/555/GCA_000175555.1_ASM17555v1	-	98/2
Haemophilus parasuis 29755	456298	PRJNA20127	20127	Proteobacteria	Gammaproteobacteria	1.51298	39.8	-	ABKM02	96	1578	1377	2/14/08	4/1/17	Contig	Iowa State University	SAMN02470064	GCA_000172375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/375/GCA_000172375.2_ASM17237v2	"221,808,112,405,131,000,000,000"	29755
Bacillus licheniformis	1402	PRJNA341305	341305	Terrabacteria group	Firmicutes	4.42218	46	chromosome:NZ_CP017247.1/CP017247.1	-	1	4607	4336	9/15/16	4/5/17	Complete Genome	Chonbuk National University	SAMN05717662	GCA_001726125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/125/GCA_001726125.1_ASM172612v1	-	BL1202
Agarivorans gilvus	680279	PRJNA299531	299531	Proteobacteria	Gammaproteobacteria	4.4166	46	chromosome:NZ_CP013021.1/CP013021.1	-	1	4245	3886	10/30/15	4/16/17	Complete Genome	Ocean University of China	SAMN04215004	GCA_001420915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/915/GCA_001420915.1_ASM142091v1	-	WH0801
Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17	1619070	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	1.03868	46	chromosome:CP011211.1	-	1	1134	1091	6/19/15	6/19/15	Complete Genome	"Banfield Lab, University of California, Berkeley"	SAMN03319767	GCA_001029695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/695/GCA_001029695.1_ASM102969v1	-	-
Bacillus infantis NRRL B-14911	1367477	PRJNA212797	212797	Terrabacteria group	Firmicutes	4.88471	46	chromosome:NC_022524.1/CP006643.1	-	1	4893	4730	9/30/13	4/17/17	Complete Genome	USDA-ARS U.S. Meat Animal Research Center	SAMN02604281	GCA_000473245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/245/GCA_000473245.1_ASM47324v1	-	NRRL B-14911
Vibrio splendidus	29497	PRJNA302718	302718	Proteobacteria	Gammaproteobacteria	5.25343	44.2	-	LNRE01	63	4678	4465	2/10/16	4/4/17	Contig	University of Cambridge	SAMN04279313	GCA_001557765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/765/GCA_001557765.1_ASM155776v1	-	MOR2
Thermoplasma acidophilum DSM 1728	273075	PRJNA110	110	Euryarchaeota	Thermoplasmata	1.56491	46	chromosome:NC_002578.1/AL139299.1	-	1	1590	1521	10/12/01	4/17/17	Complete Genome	Max-Plank-Institute	SAMEA3138325	GCA_000195915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/915/GCA_000195915.1_ASM19591v1	11029001	DSM1728
Brucella ceti	120577	PRJNA391578	391578	Proteobacteria	Alphaproteobacteria	3.36545	57.2	-	NKHE01	76	3421	3155	8/10/17	8/12/17	Contig	"Croatian Veterinary Institute, Zagreb"	SAMN07270939	GCA_002245555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/555/GCA_002245555.1_ASM224555v1	-	CRO350
Enterococcus casseliflavus EC20	565655	PRJNA32935	32935	Terrabacteria group	Firmicutes	3.42887	42.8	-	AKCC01	1	3286	3147	6/15/12	3/30/17	Contig	Broad Institute	SAMN02596921	GCA_000273565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/565/GCA_000273565.1_PB_Ente_cass_899205_V1	22829535	EC20
Enterococcus gallinarum	1353	PRJNA342049	342049	Terrabacteria group	Firmicutes	3.38189	40.5	-	MJED01	41	3257	3119	4/3/17	4/5/17	Contig	Lethbridge Research Centre	SAMN05735027	GCA_002077495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/495/GCA_002077495.1_ASM207749v1	28270110	F1213F 228
Caulobacter crescentus OR37	1292034	PRJNA188693	188693	Proteobacteria	Alphaproteobacteria	4.43042	67.8	-	APMP01	70	4127	4001	4/19/13	5/18/17	Contig	Oak Ridge National Lab	SAMN02470743	GCA_000372645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/645/GCA_000372645.1_Caulobacter.strain_OR37_v1.0	23792749	OR37
Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023	627343	PRJNA167436	167436	Proteobacteria	Alphaproteobacteria	2.14718	45.9925	chromosome:NZ_CP003715.1/CP003715.1; plasmid pZM1402301:NZ_CP003716.1/CP003716.1; plasmid pZM1402302:NZ_CP003717.1/CP003717.1; plasmid pZM1402303:NZ_CP003718.1/CP003718.1; plasmid pZM1402304:NZ_CP003719.1/CP003719.1	-	5	1918	1833	2/20/14	4/2/17	Complete Genome	"Key Laboratory of Resource Biology and Eco-environment of Ministry of Education, Sichuan Key Laboratory of Molecular Biology and Biotechnology"	SAMN03081440	GCA_000576165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/165/GCA_000576165.1_ASM57616v1	-	CP4 = NRRL B-14023
Burkholderia glumae AU6208	1176514	PRJNA160245	160245	Proteobacteria	Betaproteobacteria	4.92107	67.6	-	AMQT01	858	-	-	10/1/12	1/8/14	Contig	Zhejiang University	SAMN02472170	GCA_000300395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/395/GCA_000300395.1_ASM30039v1	-	AU6208
Clostridium sporogenes	1509	PRJNA266242	266242	Terrabacteria group	Firmicutes	4.04819	27.9	-	JZJN01	300	3878	2079	3/23/15	4/3/17	Contig	Centers for Disease Control and Prevention	SAMN03169461	GCA_000960175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/175/GCA_000960175.1_ASM96017v1	-	11579
Shewanella baltica OS117	693970	PRJNA49451	49451	Proteobacteria	Gammaproteobacteria	5.52602	45.9893	chromosome:NC_017579.1/CP002811.1; plasmid pSBAL11701:NC_017577.1/CP002812.1; plasmid pSBAL11702:NC_017580.1/CP002813.1; plasmid pSBAL11703:NC_017578.1/CP002814.1	-	4	4990	4664	6/6/11	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713637	GCA_000215895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/895/GCA_000215895.1_ASM21589v1	22328742	OS117
Providencia stuartii	588	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.56109	42	-	JTAU01	5	4336	3806	11/14/14	7/6/17	Contig	US Food and Drug Administration 	SAMN02934542	GCA_000783455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/455/GCA_000783455.1_ASM78345v1	-	FDAARGOS_87
[Ruminococcus] torques	33039	PRJEB10915	297013	Terrabacteria group	Firmicutes	7.98833	42	-	CZBJ01	291	7331	7226	10/1/15	5/19/16	Contig	SC	SAMEA3545381	GCA_001406235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/235/GCA_001406235.1_14207_7_41	-	2789STDY5834918
Blautia obeum A2-162	657314	PRJNA39167	39167	Terrabacteria group	Firmicutes	3.75749	42.6	chromosome:FP929054.1	-	1	3210	3155	3/25/10	2/27/15	Chromosome	MetaHIT	SAMEA3138360	GCA_000210015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/015/GCA_000210015.1_ASM21001v1	-	A2-162
Dorea longicatena	88431	PRJEB10915	297013	Terrabacteria group	Firmicutes	5.28823	41	-	CZAC01	3651	4182	4122	10/1/15	5/19/16	Contig	SC	SAMEA3545333	GCA_001406195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/195/GCA_001406195.1_13470_2_86	-	2789STDY5834867
Bacteroides ovatus	28116	PRJNA257718	257718	FCB group	Bacteroidetes/Chlorobi group	6.29426	41.9	-	LTDE01	87	4974	4757	3/2/16	4/5/17	Scaffold	The Genome Institute at Washington University	SAMN03956448	GCA_001578575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/575/GCA_001578575.1_ASM157857v1	-	KLE1656
[Clostridium] bolteae 90A5	997893	PRJNA64845	64845	Terrabacteria group	Firmicutes	6.4214	49.1	-	AGYI01	12	5885	5691	4/19/13	5/19/17	Scaffold	Broad Institute	SAMN02596759	GCA_000371725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/725/GCA_000371725.1_Clos_bolt_90A5_V1	-	90A5
Bacteroides uniformis str. 3978 T3 i	1339348	PRJNA206128	206128	FCB group	Bacteroidetes/Chlorobi group	5.04763	46.4	-	JNHO01	47	4279	4075	6/9/14	4/2/17	Contig	IGS	SAMN02370940	GCA_000699885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/885/GCA_000699885.1_ASM69988v1	-	3978 T3 i
Treponema denticola SP37	999438	PRJNA64927	64927	Spirochaetes	Spirochaetia	2.82377	38	-	AGEA01	2	2706	2566	2/7/13	4/2/17	Scaffold	Broad Institute	SAMN02596726	GCA_000338455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/338/455/GCA_000338455.1_Trep_dent_SP37_V1	-	SP37
Bordetella bronchiseptica MO211	1331239	PRJEB140	177235	Proteobacteria	Betaproteobacteria	5.24319	66.9	-	CAKT01	1	4994	4295	10/12/12	5/18/17	Scaffold	WTSI	SAMEA2271991	GCA_000312945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/945/GCA_000312945.1_ASM31294v1	-	MO211
Bacillus velezensis NAU-B3	1385727	PRJEB4476	215733	Terrabacteria group	Firmicutes	4.20461	45.9886	chromosome I:NC_022530.1/HG514499.1; plasmid II:NC_022531.1/HG514500.1	-	2	4194	3955	10/3/13	4/10/17	Complete Genome	CeBiTec	SAMEA2272154	GCA_000493375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/375/GCA_000493375.1_BAPNAU_WGS	-	NAU-B3
Mesorhizobium loti R88b	935548	PRJNA76961	76961	Proteobacteria	Alphaproteobacteria	7.19511	62.4	-	JACE01	1	6972	6723	1/7/14	4/2/17	Scaffold	JGI	SAMN02597285	GCA_000517145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/145/GCA_000517145.1_ASM51714v1	-	R88b
Paenibacillus xylanexedens	528191	PRJNA356199	356199	Terrabacteria group	Firmicutes	7.09824	45.9881	chromosome:NZ_CP018620.1/CP018620.1; plasmid unnamed:NZ_CP018621.1/CP018621.1	-	2	6208	5944	12/19/16	4/17/17	Complete Genome	Korea Polar Research Institute	SAMN06109053	GCA_001908275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/275/GCA_001908275.1_ASM190827v1	-	PAMC 22703
Bacillus velezensis	492670	PRJNA349795	349795	Terrabacteria group	Firmicutes	4.24158	45.9591	chromosome:NZ_CP017775.1/CP017775.1; plasmid p9912D:NZ_CP017776.1/CP017776.1	-	2	4295	4037	10/31/16	3/22/17	Complete Genome	"Institute of Applied Ecology, Chinese Academy of Sciences"	SAMN05517979	GCA_001857985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/985/GCA_001857985.1_ASM185798v1	-	9912D
Ruminococcus albus	1264	PRJEB17112	351336	Terrabacteria group	Firmicutes	4.27653	44.9	-	FOKQ01	103	3886	3661	10/31/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910406	GCA_900112155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/155/GCA_900112155.1_IMG-taxon_2593339152_annotated_assembly	-	AR67
Streptococcus gordonii	1302	PRJNA274768	274768	Terrabacteria group	Firmicutes	2.19745	40.5	-	JYGL01	2	2163	2037	3/23/15	4/3/17	Contig	University at Buffalo	SAMN03334895	GCA_000959925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/925/GCA_000959925.1_ASM95992v1	25999552	G9B
Zymomonas mobilis subsp. mobilis NRRL B-12526	1194424	PRJNA167429	167429	Proteobacteria	Alphaproteobacteria	2.179	45.9583	chromosome:NZ_CP003709.1/CP003709.1; plasmid pZM1252601:NZ_CP003710.1/CP003710.1; plasmid pZM1252602:NZ_CP003711.1/CP003711.1; plasmid pZM1252603:NZ_CP003712.1/CP003712.1; plasmid pZM1252604:NZ_CP003713.1/CP003713.1; plasmid pZM1252605:NZ_CP003714.1/CP003714.1	-	6	1946	1859	2/20/14	4/2/17	Complete Genome	"Key Laboratory of Resource Biology and Eco-environment of Ministry of Education, Sichuan Key Laboratory of Molecular Biology and Biotechnology"	SAMN03081439	GCA_000576125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/125/GCA_000576125.1_ASM57612v1	-	NRRL B-12526
Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023	627343	PRJNA35033	35033	Proteobacteria	Alphaproteobacteria	2.16324	45.9516	chromosome:NC_022900.1/CP006818.1; plasmid unnamed:NC_022901.1/CP006891.1; plasmid unnamed2:NC_022913.1/CP006892.1; plasmid unnamed3:NC_022902.1/CP006893.1; plasmid unnamed4:NC_022903.1/CP006894.1; plasmid unnamed5:NC_022910.1/CP006895.1	-	6	1938	1860	11/25/13	4/2/17	Complete Genome	JGI	SAMN00262712	GCA_000498655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/655/GCA_000498655.1_ASM49865v1	24407627	CP4 = NRRL B-14023
Lactobacillus gasseri K7	1334627	PRJNA203137	203137	Terrabacteria group	Firmicutes	1.99416	34.8	-	ASRG02	8	1990	1826	6/4/13	4/10/17	Scaffold	"Institute of Dairy Science and Probiotics, Department of Animal Science, Biotechnical Faculty, University of Ljubljana"	SAMN02178496	GCA_000406345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/345/GCA_000406345.2_LK71.0	25059871	K7
Clostridium acetobutylicum	1488	PRJNA384327	384327	Terrabacteria group	Firmicutes	4.0766	30.7094	plasmid pSOL1:NZ_CM008109.1/CM008109.1	NERJ01	34	3970	3862	7/10/17	7/19/17	Scaffold	The Ohio State University	SAMN06840645	GCA_002216285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/285/GCA_002216285.2_ASM221628v2	-	JB200
Mycobacterium smegmatis MKD8	1214915	PRJNA171330	171330	Terrabacteria group	Actinobacteria	7.09214	67.3	chromosome:NZ_CM001762.1/CM001762.1	AOCJ01	1	14025	13668	1/8/13	5/19/17	Chromosome	"Wadsworth Center, New York State Dept of Health"	SAMN02472105	GCA_000331165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/165/GCA_000331165.1_ASM33116v1	23618714	MKD8
Listeria innocua FSL S4-378	702456	PRJNA42851	42851	Terrabacteria group	Firmicutes	3.11594	37.4519	chromosome:CM001048.1	ADXG01	1	6337	6330	12/6/10	11/19/13	Chromosome	Life Technologies Corporation	SAMN01909076	GCA_000183885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/885/GCA_000183885.1_ASM18388v1	21126366	FSL S4-378
Methanosarcina barkeri JCM 10043	1298606	PRJDB882	243766	Euryarchaeota	Methanomicrobia	4.45896	39.1	-	BBEF01	243	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016803	GCA_001316305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/305/GCA_001316305.1_ASM131630v1	-	JCM 10043
Bacillus licheniformis	1402	PRJNA386752	386752	Terrabacteria group	Firmicutes	4.43849	45.9514	chromosome:NZ_CP021677.1/CP021677.1; plasmid pBL027-1:NZ_CP021678.1/CP021678.1; plasmid pBL027-2:NZ_CP021679.1/CP021679.1	-	3	4646	4392	6/6/17	6/8/17	Complete Genome	Microbial Institiue for Fermentation Industry	SAMN07125934	GCA_002174255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/255/GCA_002174255.1_ASM217425v1	-	SRCM100027
Bacillus velezensis	492670	PRJNA359634	359634	Terrabacteria group	Firmicutes	4.14361	45.9493	chromosome:NZ_CP019040.1/CP019040.1; plasmid unnamed:NZ_CP019039.1/CP019039.1	-	2	4134	3943	2/21/17	3/22/17	Complete Genome	National Institute of Agricultural Sciences	SAMN06196402	GCA_002005345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/345/GCA_002005345.1_ASM200534v1	-	GH1-13
Cupriavidus metallidurans NBRC 101272	1218106	PRJDB279	172102	Proteobacteria	Betaproteobacteria	6.63861	63.8	-	BCZO01	63	6187	5985	3/11/16	4/5/17	Contig	National Institute of Technology and Evaluation	SAMD00046895	GCA_001598775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/775/GCA_001598775.1_ASM159877v1	-	NBRC 101272
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.0682	41.6	-	JJPF01	146	3494	3293	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708945	GCA_000978935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/978/935/GCA_000978935.1_gtlEnvA5udCFS	25756680	3.F.A.2.5
Shewanella oneidensis MR-1	211586	PRJNA335	335	Proteobacteria	Gammaproteobacteria	5.13142	45.9276	chromosome:NC_004347.2/AE014299.2; plasmid megaplasmid:NC_004349.1/AE014300.1	-	2	4587	4214	9/12/02	7/3/17	Complete Genome	TIGR	SAMN02604014	GCA_000146165.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/146/165/GCA_000146165.2_ASM14616v2	"123,688,131,603,801,000,000,000"	MR-1
Anaplasma phagocytophilum str. CRT38	1269275	PRJNA183838	183838	Proteobacteria	Alphaproteobacteria	1.50655	41.7	-	APHI01	2	1221	1087	4/23/13	4/2/17	Contig	University of Minnesota	SAMN02471894	GCA_000478445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/445/GCA_000478445.1_ASM47844v1	-	CRT38
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.16437	39.9	-	FPMI01	9	1063	964	5/10/17	5/24/17	Contig	WTSI	SAMEA1094354	GCA_900118495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/495/GCA_900118495.1_7067_6_42	-	C11_98
Pectobacterium atrosepticum ICMP 1526	1076138	PRJNA72123	72123	Proteobacteria	Gammaproteobacteria	4.86938	50.9	-	ALIV01	33	4447	4216	6/24/15	4/3/17	Contig	The New Zealand Institute for Plant & Food Research	SAMN03780058	GCA_001038685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/685/GCA_001038685.1_ASM103868v1	26251497	ICMP 1526
Salmonella bongori	54736	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.41788	51.3	-	MXOD01	95	4381	4042	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356955	GCA_002035285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/285/GCA_002035285.1_ASM203528v1	-	BCW_1556
Bacteroides thetaiotaomicron	818	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	6.20334	42.4	-	CZAE01	63	5049	4784	10/1/15	4/4/17	Contig	SC	SAMEA3545312	GCA_001405095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/095/GCA_001405095.1_13470_2_65	-	2789STDY5834846
Streptococcus uberis 6780	1450190	PRJNA234018	234018	Terrabacteria group	Firmicutes	1.96086	36.5	-	JATD01	26	1949	1873	4/22/15	4/3/17	Contig	University of Nottingham	SAMN02570398	GCA_000975405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/975/405/GCA_000975405.1_ASM97540v1	25898893	6780
Bartonella quintana JK 19	1134507	PRJNA81687	81687	Proteobacteria	Alphaproteobacteria	1.56904	38.8	-	AHPH01	3	1377	1201	6/12/14	4/10/17	Scaffold	Broad Institute	SAMN00778966	GCA_000708575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/575/GCA_000708575.1_Bart_quin_JK_19_V1	-	JK 19
Rhodobacter capsulatus YW1	1414586	PRJNA225486	225486	Proteobacteria	Alphaproteobacteria	3.64774	66.6	-	AYPY01	51	3461	3349	12/11/13	4/4/17	Scaffold	University of British Columbia	SAMN02471350	GCA_000506525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/525/GCA_000506525.2_denovokmer200	24526637	YW1
Clostridium tetani	1513	PRJNA265068	265068	Terrabacteria group	Firmicutes	2.85032	28.4	-	JSWC01	118	2791	2699	12/19/14	4/2/17	Contig	Aarhus University	SAMN03145081	GCA_000805755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/755/GCA_000805755.1_ASM80575v1	25638019	CN655
Lactobacillus acidophilus CIP 76.13	1226675	PRJEB1532	200908	Terrabacteria group	Firmicutes	1.95182	34.6	-	CBLQ01	34	1961	1794	7/7/13	4/1/17	Scaffold	INRA STLO	SAMEA2272342	GCA_000469705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/705/GCA_000469705.1_LaCIP7613V1	-	CIP 76.13
Bartonella henselae JK 42	1402980	PRJNA221538	221538	Proteobacteria	Alphaproteobacteria	1.92197	38.3	-	AZZT01	13	1687	1469	1/8/14	4/10/17	Scaffold	Broad Institute	SAMN02364139	GCA_000516715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/715/GCA_000516715.1_Bart_hens_JK_42_V1	-	JK 42
Bacillus licheniformis	1402	PRJNA291016	291016	Terrabacteria group	Firmicutes	4.30071	45.9	chromosome:NZ_CP014795.1/CP014795.1	-	1	4471	4263	3/29/17	4/1/17	Complete Genome	Chonbuk National University	SAMN03938641	GCA_002074075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/075/GCA_002074075.1_ASM207407v1	-	SCK B11
Bacillus paralicheniformis	1648923	PRJNA379336	379336	Terrabacteria group	Firmicutes	4.35247	45.9	chromosome:NZ_CP020352.1/CP020352.1	-	1	4363	4134	3/22/17	3/24/17	Complete Genome	Shandong Agricultural University	SAMN06605939	GCA_002068155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/068/155/GCA_002068155.1_ASM206815v1	-	MDJK30
Bacillus licheniformis	1402	PRJNA286062	286062	Terrabacteria group	Firmicutes	4.2524	45.9	chromosome:NZ_CP014781.1/CP014781.1	-	1	4398	4198	3/22/16	4/5/17	Complete Genome	Seoul National University	SAMN03764480	GCA_001596055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/055/GCA_001596055.1_ASM159605v1	-	HRBL-15TDI7
Aneurinibacillus soli	1500254	PRJDB4401	308826	Terrabacteria group	Firmicutes	4.11677	45.9	chromosome:AP017312.1	-	1	4198	3978	1/13/16	1/13/16	Complete Genome	Korea Research Institute of Bioscience and Biotechnology (KRIBB)	SAMD00043871	GCA_002355375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/375/GCA_002355375.1_ASM235537v1	-	CB4
Pediococcus pentosaceus IE-3	1133596	PRJEA80991	80991	Terrabacteria group	Firmicutes	1.80238	37.2	-	CAHU01	91	1775	1673	3/26/12	3/30/17	Contig	Institute of Microbial Technology (CSIR)	SAMEA2272526	GCA_000285875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/875/GCA_000285875.1_ASM28587v1	22843596	IE-3
Methanosarcina sp. MTP4	1434100	PRJNA230955	230955	Euryarchaeota	Methanomicrobia	4.21147	45.9	chromosome:NZ_CP009505.1/CP009505.1	-	1	3588	3422	4/7/15	4/10/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN03074591	GCA_000970045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/045/GCA_000970045.1_ASM97004v1	-	MTP4
Bacillus paralicheniformis	1648923	PRJNA271049	271049	Terrabacteria group	Firmicutes	4.38802	45.9	chromosome:NZ_CP010524.1/CP010524.1	-	1	4421	4205	2/17/15	4/3/17	Complete Genome	Inner Mongolia Agricultural University	SAMN03272542	GCA_000876525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/525/GCA_000876525.1_ASM87652v1	-	BL-09
Thiomicrospira aerophila AL3	717772	PRJNA52553	52553	Proteobacteria	Gammaproteobacteria	2.15836	45.9	chromosome:NZ_CP007030.1/CP007030.1	-	1	2095	2032	1/3/14	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02256538	GCA_000227665.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/665/GCA_000227665.3_ASM22766v3	-	AL3
Chromobacterium violaceum	536	PRJNA277426	277426	Proteobacteria	Betaproteobacteria	4.75249	64.9	-	LDUX01	87	4438	4282	6/30/15	4/3/17	Contig	University of Malaya	SAMN03751790	GCA_001043815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/815/GCA_001043815.1_ASM104381v1	-	LK30
Brevibacterium linens	1703	PRJNA387187	387187	Terrabacteria group	Actinobacteria	4.02983	62.8	-	NRGO01	58	3684	3551	9/21/17	9/23/17	Scaffold	"Dutton Lab, UCSD"	SAMN07141153	GCA_002332335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/335/GCA_002332335.1_ASM233233v1	28644126	900_6
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.65996	67.4	-	LOVZ01	119	6043	5733	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449217	GCA_001522565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/565/GCA_001522565.1_ASM152256v1	-	LA-6-3-30-S1-D2
Bacillus paralicheniformis ATCC 9945a	766760	PRJNA49115	49115	Terrabacteria group	Firmicutes	4.37631	45.9	chromosome:NC_021362.1/CP005965.1	-	1	4392	4172	6/5/13	4/1/17	Complete Genome	Georg-August-University Goettingen	SAMN02603262	GCA_000408885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/885/GCA_000408885.1_ASM40888v1	23908277	ATCC 9945a
Staphylococcus haemolyticus	1283	PRJNA246630	246630	Terrabacteria group	Firmicutes	2.4583	32.6	-	JQHA01	40	2438	2317	10/6/14	3/24/17	Contig	Universiti of Malaya	SAMN02996616	GCA_000763725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/725/GCA_000763725.1_ASM76372v1	-	C10F
Photorhabdus luminescens subsp. luminescens	171439	PRJNA273502	273502	Proteobacteria	Gammaproteobacteria	5.46497	42.9	-	JXSK01	16	4733	4339	7/17/15	4/3/17	Contig	Kyungpook National University	SAMN03292525	GCA_001083805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/805/GCA_001083805.1_ASM108380v1	-	DSM 3368
Moorella thermoacetica	1525	PRJNA330927	330927	Terrabacteria group	Firmicutes	2.84462	55.7	-	MIHH01	82	2851	2673	11/9/16	4/5/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05430243	GCA_001874065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/065/GCA_001874065.1_ASM187406v1	-	DSM 11768
Brucella ovis IntaBari-2002-82-58	1293916	PRJNA189528	189528	Proteobacteria	Alphaproteobacteria	3.29087	57.2	-	AQIK01	23	3406	3030	4/16/13	4/1/17	Contig	Broad Institute	SAMN01921149	GCA_000365925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/925/GCA_000365925.1_Bruc_ovis_IntaBari-2002-82-58_V1	-	IntaBari-2002-82-58
Bacillus amyloliquefaciens Y2	1126211	PRJNA78839	78839	Terrabacteria group	Firmicutes	4.23862	45.9	chromosome:NC_017912.1/CP003332.1	-	1	4246	4038	5/11/12	3/30/17	Complete Genome	"Faculty of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming 650201 , PR China"	SAMN02603232	GCA_000262385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/385/GCA_000262385.1_ASM26238v1	23357245	Y2
Bacillus velezensis YAU B9601-Y2	1155777	PRJEA86121	86121	Terrabacteria group	Firmicutes	4.24277	45.9	chromosome:NC_017061.1/HE774679.1	-	1	4249	4042	3/15/12	4/10/17	Complete Genome	"Center for Biotechnology, Bielefeld University"	SAMEA2272044	GCA_000284395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/395/GCA_000284395.1_ASM28439v1	22628498	YAU B9601-Y2
Thermincola potens JR	635013	PRJNA41467	41467	Terrabacteria group	Firmicutes	3.15742	45.9	chromosome:NC_014152.1/CP002028.1	-	1	3073	2961	5/13/10	9/3/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598533	GCA_000092945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/945/GCA_000092945.1_ASM9294v1	-	JR
Bacillus amyloliquefaciens	1390	PRJNA386749	386749	Terrabacteria group	Firmicutes	4.08824	45.8922	chromosome:NZ_CP021505.1/CP021505.1; plasmid pBA1267-1:NZ_CP021506.1/CP021506.1	-	2	4266	4028	6/6/17	6/15/17	Complete Genome	Microbial Institiue for Fermentation Industry	SAMN07125918	GCA_002173635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/635/GCA_002173635.1_ASM217363v1	-	SRCM101267
Cronobacter sakazakii	28141	PRJNA251687	251687	Proteobacteria	Gammaproteobacteria	4.4162	56.9	-	JOLE01	91	4320	4097	10/9/15	4/4/17	Scaffold	"Nottingham Trent University, UK"	SAMN02839371	GCA_001308945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/308/945/GCA_001308945.1_ASM130894v1	26438044	712
Bacillus licheniformis	1402	PRJNA293170	293170	Terrabacteria group	Firmicutes	4.34247	45.8363	chromosome:NZ_CP014842.1/CP014842.1; plasmid pSCDB14:NZ_CP014843.1/CP014843.1	-	2	4479	4280	3/29/17	4/1/17	Complete Genome	Chonbuk National University	SAMN03998272	GCA_002074095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/095/GCA_002074095.1_ASM207409v1	-	SCDB 14
Erwinia amylovora Ea356	1255303	PRJEB599	196606	Proteobacteria	Gammaproteobacteria	3.7922	53.5747	plasmid pEA29:NC_020919.1/HF560643.1	CAOX01	15	3563	3397	4/8/13	4/10/17	Contig	CeBiTec	SAMEA2272233	GCA_000367545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/545/GCA_000367545.2_ASM36754v2	-	Ea 356
Clostridium beijerinckii HUN142	1410652	PRJNA223437	223437	Terrabacteria group	Firmicutes	6.10671	29.6	-	JHXK01	53	5496	5202	4/8/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02744012	GCA_000621745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/745/GCA_000621745.1_ASM62174v1	-	HUN142
Streptomyces scabiei	1930	PRJNA309706	309706	Terrabacteria group	Actinobacteria	11.2003	70.7	-	LRTM01	1374	10783	9093	2/5/16	3/12/17	Contig	University of Florida	SAMN04439349	GCA_001550235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/550/235/GCA_001550235.1_ASM155023v1	-	96-08
Oscillatoria nigro-viridis PCC 7112	179408	PRJNA158711	158711	Terrabacteria group	Cyanobacteria/Melainabacteria group	8.27225	45.8127	chromosome:NC_019729.1/CP003614.1; plasmid pOSC7112.01:NC_019763.1/CP003615.1; plasmid pOSC7112.02:NC_019730.1/CP003616.1; plasmid pOSC7112.03:NC_019731.1/CP003617.1; plasmid pOSC7112.04:NC_019764.1/CP003618.1; plasmid pOSC7112.05:NC_019732.1/CP003619.1	-	6	6928	6408	12/6/12	4/17/17	Complete Genome	JGI	SAMN02261335	GCA_000317475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/475/GCA_000317475.1_ASM31747v1	-	PCC 7112
Citrobacter koseri	545	PRJNA328418	328418	Proteobacteria	Gammaproteobacteria	4.63565	53.8	-	MBTW01	21	4486	4307	11/1/16	4/5/17	Contig	University of Malaya	SAMN05371063	GCA_001858105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/105/GCA_001858105.1_ASM185810v1	-	B1B
Bacillus clausii	79880	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.37597	44.5	-	NPCF01	150	4342	4180	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372707	GCA_002271555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/555/GCA_002271555.1_assembly-7541-T_v1	-	7541
Gluconobacter oxydans	442	PRJNA278918	278918	Proteobacteria	Alphaproteobacteria	3.39982	55.7	-	LCTG01	12	3188	3011	5/15/15	4/3/17	Contig	Nanjing Forestry University	SAMN03434887	GCA_001008185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/185/GCA_001008185.1_ASM100818v1	26089417	NL71
Bacteroides vulgatus str. 3775 SR(B) 19	1339351	PRJNA206133	206133	FCB group	Bacteroidetes/Chlorobi group	5.42007	42.2	-	JNHJ01	193	4803	4412	6/9/14	4/2/17	Contig	IGS	SAMN02370947	GCA_000699845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/845/GCA_000699845.1_ASM69984v1	-	3775 SR(B) 19
Agrobacterium vitis	373	PRJNA328306	328306	Proteobacteria	Alphaproteobacteria	5.83155	57.6	-	MBEY01	37	5309	5101	11/1/16	4/5/17	Contig	Monash University Malaysia	SAMN05369594	GCA_001860125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/125/GCA_001860125.1_ASM186012v1	-	Ni1
Xenorhabdus bovienii str. Intermedium	1379677	PRJEB4327	255484	Proteobacteria	Gammaproteobacteria	4.69093	44.9	-	CBTB01	217	4316	3880	7/17/14	4/2/17	Scaffold	UWM	SAMEA3139092	GCA_000736615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/615/GCA_000736615.1_XBI_3529_PRJEB4327	-	Intermedium
Moraxella catarrhalis 103P14B1	857579	PRJNA49911	49911	Proteobacteria	Gammaproteobacteria	1.9617	41.5	-	AERE01	99	1860	1707	3/22/11	3/30/17	Contig	Center for Genomic Sciences	SAMN02393786	GCA_000192925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/925/GCA_000192925.2_ASM19292v2	21269504	103P14B1
Vibrio coralliilyticus	190893	PRJNA258550	258550	Proteobacteria	Gammaproteobacteria	5.73279	45.8007	chromosome 1:NZ_CP009264.1/CP009264.2; chromosome 2:NZ_CP009265.1/CP009265.2; plasmid pOCN014:NZ_CP009266.1/CP009266.2	-	3	5289	4993	10/6/14	4/2/17	Complete Genome	University of Hawaii at Manoa	SAMN03010512	GCA_000763535.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/535/GCA_000763535.2_ASM76353v2	25523774	OCN014
Neisseria lactamica	486	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	2.3211	49.4	-	JVBE01	148	2317	2167	7/10/15	4/3/17	Contig	University of Washington	SAMN03197784	GCA_001065565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/565/GCA_001065565.1_ASM106556v1	26230489	583_NLAC
Bacillus paralicheniformis	1648923	PRJNA401080	401080	Terrabacteria group	Firmicutes	4.53507	45.8	chromosome:CP023168.1	-	1	-	-	9/28/17	9/28/17	Complete Genome	Dongduk Women's University	SAMN07594137	GCA_002393225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/225/GCA_002393225.1_ASM239322v1	-	14DA11
Lactobacillus brevis	1580	PRJNA318996	318996	Terrabacteria group	Firmicutes	2.55267	45.8	chromosome:NZ_CP015398.1/CP015398.1	-	1	2495	2391	6/27/16	4/5/17	Complete Genome	The University of Hong Kong	SAMN04871683	GCA_001676805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/805/GCA_001676805.1_ASM167680v1	-	NPS-QW-145
Parabacteroides distasonis str. 3776 D15 iv	1339343	PRJNA206127	206127	FCB group	Bacteroidetes/Chlorobi group	5.4222	44.8	-	JNHU01	90	4678	4403	6/9/14	6/12/17	Contig	IGS	SAMN02370939	GCA_000699805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/805/GCA_000699805.1_ASM69980v1	-	3776 D15 iv
Photobacterium angustum	661	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.77255	39.6	-	JZSS01	72	4293	3979	3/10/15	4/3/17	Contig	FDA/CFSAN	SAMN03295477	GCA_000950185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/185/GCA_000950185.1_CFSAN029429_01.0	25931609	GCSL-A10-3
Bacillus weihenstephanensis	86662	PRJNA318326	318326	Terrabacteria group	Firmicutes	5.58183	35.2	-	LXLN01	79	5866	5448	10/12/16	4/5/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04817214	GCA_001757825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/825/GCA_001757825.1_ASM175782v1	-	GOE2
Bacillus sp. SDLI1	1774743	PRJNA305641	305641	Terrabacteria group	Firmicutes	4.13404	45.8	chromosome:NZ_CP013950.1/CP013950.1	-	1	4176	3927	2/9/16	4/12/17	Complete Genome	Harvard Medical School	SAMN04330452	GCA_001553895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/895/GCA_001553895.1_ASM155389v1	27013050	SDLI1
Streptococcus sanguinis SK115	888810	PRJNA53161	53161	Terrabacteria group	Firmicutes	2.34673	43.4	-	AEXW01	5	2304	2226	3/10/11	3/30/17	Scaffold	Baylor College of Medicine	SAMN00253314	GCA_000192205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/205/GCA_000192205.1_ASM19220v1	-	SK115
Staphylococcus saprophyticus	29385	PRJNA313000	313000	Terrabacteria group	Firmicutes	2.6359	32.7	-	LUGM01	5	2590	2503	3/17/16	4/5/17	Contig	University of Calcutta	SAMN04532508	GCA_001593625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/625/GCA_001593625.1_ASM159362v1	27174281	CNV2
Vibrio sp. HENC-03	992012	PRJNA64031	64031	Proteobacteria	Gammaproteobacteria	5.90719	45.5	-	AJSS01	87	5325	5156	10/15/12	4/16/17	Scaffold	Institute for Genome Sciences	SAMN00752549	GCA_000305755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/755/GCA_000305755.2_ASM30575v2	-	HENC-03
Bacillus coagulans XZL4	1071395	PRJNA71045	71045	Terrabacteria group	Firmicutes	2.86628	47.4	-	AFWM01	123	2916	2632	8/10/11	3/30/17	Scaffold	Shanghai Jiao Tong University	SAMN02470953	GCA_000223155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/223/155/GCA_000223155.1_ASM22315v1	24473268	XZL4
Bacillus subtilis	1423	PRJNA259687	259687	Terrabacteria group	Firmicutes	3.87628	45.8	chromosome:NZ_CP009748.1/CP009748.1	-	1	4007	3838	11/5/14	3/25/17	Complete Genome	Jiangxi Normal University	SAMN03010508	GCA_000772125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/125/GCA_000772125.1_ASM77212v1	-	ATCC 13952
Leuconostoc citreum	33964	PRJNA383560	383560	Terrabacteria group	Firmicutes	1.82988	38.8	-	NDXG01	19	1847	1756	4/28/17	5/3/17	Contig	Brigham Young University	SAMN06767174	GCA_002115685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/685/GCA_002115685.1_ASM211568v1	-	DmW_111
Yersinia mollaretii	33060	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.61685	49.4	-	CTRC01	40	4230	4063	3/26/15	4/3/17	Scaffold	SC	SAMEA859952	GCA_001220845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/845/GCA_001220845.1_4840_8_8	-	64/02
Yersinia intermedia	631	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.66771	47.7	-	CPVD01	41	4288	4072	3/23/15	4/3/17	Scaffold	SC	SAMEA859968	GCA_001140765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/765/GCA_001140765.1_4821_5_11	-	FCF84
Bacillus amyloliquefaciens XH7	1034836	PRJNA67079	67079	Terrabacteria group	Firmicutes	3.9392	45.8	chromosome:NC_017191.1/CP002927.1	-	1	4071	3889	7/27/11	3/30/17	Complete Genome	south china university of technology	SAMN02603869	GCA_000221645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/645/GCA_000221645.1_ASM22164v1	21914895	XH7
Bacillus amyloliquefaciens TA208	999891	PRJNA64581	64581	Terrabacteria group	Firmicutes	3.93751	45.8	chromosome:NC_017188.1/CP002627.1	-	1	4062	3891	4/8/11	3/30/17	Complete Genome	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN02603399	GCA_000195515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/515/GCA_000195515.1_ASM19551v1	21515778	TA208
Propionibacterium freudenreichii	1744	PRJEB6446	270210	Terrabacteria group	Actinobacteria	2.69969	67.1	-	CCYV01	104	2397	2278	12/11/14	4/3/17	Scaffold	INRA STLO	SAMEA2822493	GCA_001050955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/955/GCA_001050955.1_ASM105095v1	-	ITG P1
Clostridium novyi A str. NCTC 538	1443120	PRJNA233475	233475	Terrabacteria group	Firmicutes	2.51993	28.4785	plasmid p1Cn538:NZ_CM003327.1/CM003327.1	JENK01	69	2409	2267	6/20/14	4/3/17	Contig	National Veterinary Institute (SVA)	SAMN02593761	GCA_000725865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/865/GCA_000725865.2_NCTC538_1.0	25254374	NCTC 538
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.00075	66.9474	chromosome 1:NZ_CM003771.1/CM003771.1; chromosome 2:NZ_CM003772.1/CM003772.1	LNJU01	5	7337	6820	2/2/16	6/28/17	Chromosome	Northern Arizona University	SAMN03449437	GCA_001546975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/975/GCA_001546975.1_ASM154697v1	-	MSMB1157
Streptococcus iniae	1346	PRJNA320907	320907	Terrabacteria group	Firmicutes	1.97627	36.6	-	LXQF01	144	1885	1806	6/2/16	4/5/17	Contig	"Sichuan Agricultural University,Sichuan, P.R. China"	SAMN04958999	GCA_001654755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/654/755/GCA_001654755.1_ASM165475v1	-	DX09
Paenibacillus polymyxa E681	349520	PRJNA16065	16065	Terrabacteria group	Firmicutes	5.39488	45.8	chromosome:NC_014483.2/CP000154.2	-	1	4886	4515	9/3/10	4/3/17	Complete Genome	Korea Research Institute of Bioscience and Biotechnology (KRIBB)	SAMN02603484	GCA_000146875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/146/875/GCA_000146875.2_ASM14687v2	"2,085,189,624,939,170"	E681
Campylobacter concisus ATCC 51561	1243032	PRJNA177641	177641	Proteobacteria	delta/epsilon subdivisions	1.9957	39.6	-	ANNH01	69	1991	1901	9/13/13	4/2/17	Contig	The University of New South Wales	SAMN02471186	GCA_000466705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/705/GCA_000466705.1_ATCC51561	23984967	ATCC 51561
Thermosipho melanesiensis	46541	PRJNA231770	231770	Thermotogae	Thermotogae	1.88986	31.2	-	JYDB01	21	1961	1866	2/13/17	4/6/17	Scaffold	University of Oslo	SAMN03284851	GCA_001999645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/645/GCA_001999645.1_ASM199964v1	-	487
Metallosphaera sedula	43687	PRJNA253049	253049	TACK group	Crenarchaeota	2.19149	46.2	chromosome:NZ_CP008822.1/CP008822.1	-	1	2373	2289	9/4/14	4/2/17	Chromosome	University of Nebraska-Lincoln	SAMN02866348	GCA_000747605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/605/GCA_000747605.1_ASM74760v1	25092032	CuR1
Pseudomonas mendocina	300	PRJNA253519	253519	Proteobacteria	Gammaproteobacteria	5.42298	62.4	-	JOVT01	6	5142	4985	7/11/14	4/5/17	Contig	University of Malaya	SAMN02885255	GCA_000725105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/105/GCA_000725105.2_ASM72510v2	-	S13.2
Saccharophagus degradans 2-40	203122	PRJNA316	316	Proteobacteria	Gammaproteobacteria	5.05753	45.8	chromosome:NC_007912.1/CP000282.1	-	1	4233	4111	3/17/06	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02598483	GCA_000013665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/665/GCA_000013665.1_ASM1366v1	18516288	Feb-40
Finegoldia magna ALB8	1459804	PRJNA237489	237489	Terrabacteria group	Firmicutes	1.91875	31.9	-	JDVC01	54	1860	1700	2/26/14	4/2/17	Contig	Lund University	SAMN02628374	GCA_000582635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/635/GCA_000582635.1_FinMag1.0	-	ALB8
Acholeplasma laidlawii	2148	PRJNA383989	383989	Terrabacteria group	Tenericutes	1.36596	32.3	-	NELN01	212	1510	1255	8/15/17	8/17/17	Scaffold	Kazan Institute of Biochemistry and Biophysics KazSC RAS	SAMN06821038	GCA_002252075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/075/GCA_002252075.1_ASM225207v1	-	PG8RMel
Lysinibacillus sphaericus KCTC 3346	1354027	PRJNA210615	210615	Terrabacteria group	Firmicutes	4.56087	37.1	-	AUOZ01	83	4477	4320	7/15/13	4/1/17	Contig	KRIBB	SAMN02255022	GCA_000427235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/235/GCA_000427235.1_KCTC3346_01	23950128	KCTC 3346
Vibrio nigripulchritudo	28173	PRJEB625	222436	Proteobacteria	Gammaproteobacteria	6.32216	45.76	chromosome 1:NC_022528.1/FO203526.1; chromosome 2:NC_022543.1/FO203527.1	-	2	5768	5563	10/1/13	4/2/17	Complete Genome	Genoscope CEA	SAMEA4532329	GCA_000801275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/275/GCA_000801275.1_ASM80127v1	23739050	SFn1
Clostridium butyricum 60E.3	997898	PRJNA64855	64855	Terrabacteria group	Firmicutes	4.6444	28.9	-	AGYK01	10	4157	3983	4/19/13	5/18/17	Scaffold	Broad Institute	SAMN02596761	GCA_000371625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/625/GCA_000371625.1_Clos_buty_60E_3_V1	-	60E.3
Akkermansia muciniphila	239935	PRJEB21068	396410	PVC group	Verrucomicrobia	2.6525	55.8	-	FXXV01	110	2314	2234	7/29/17	8/7/17	Contig	"WAGENINGEN UNIVERSITY, LABORATORY OF SYSTEMS AND SYNTHETIC BIOLOGY."	SAMEA104102612	GCA_900184905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/184/905/GCA_900184905.1_Siamang.fasta	-	-
Rhodococcus erythropolis XP	1078016	PRJNA72225	72225	Terrabacteria group	Actinobacteria	7.22958	62.3	-	AGCF01	9	6805	6595	9/9/11	5/19/17	Contig	Shanghai Jiao Tong University	SAMN02470952	GCA_000225665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/665/GCA_000225665.2_ASM22566v2	-	XP
Lactobacillus brevis	1580	PRJNA318943	318943	Terrabacteria group	Firmicutes	2.47773	45.7529	chromosome:NZ_CP015338.1/CP015338.1; plasmid unnamed1:NZ_CP015339.1/CP015339.1; plasmid unnamed2:NZ_CP015340.1/CP015340.1; plasmid unnamed3:NZ_CP015341.1/CP015341.1	-	4	2509	2355	5/15/17	5/23/17	Complete Genome	Gyeonsang National University	SAMN04870420	GCA_002138395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/395/GCA_002138395.1_ASM213839v1	-	100D8
Lactobacillus brevis	1580	PRJNA313253	313253	Terrabacteria group	Firmicutes	2.67355	45.716	chromosome:NZ_CP016797.1/CP016797.1; plasmid pl12112-1:NZ_CP016798.1/CP016798.1; plasmid pl12112-2:NZ_CP016799.1/CP016799.1; plasmid pl12112-3:NZ_CP016800.1/CP016800.1; plasmid pl12112-4:NZ_CP016801.1/CP016801.1; plasmid pl12112-5:NZ_CP016802.1/CP016802.1	-	6	2645	2338	5/2/17	5/6/17	Complete Genome	Technische Universitaet Muenchen	SAMN04517633	GCA_002117225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/225/GCA_002117225.1_ASM211722v1	-	TMW 1.2112
Prevotella ruminicola	839	PRJEB18362	355800	FCB group	Bacteroidetes/Chlorobi group	3.96169	46.3	-	FRBD01	63	3365	3240	12/2/16	4/6/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216463	GCA_900142525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/525/GCA_900142525.1_IMG-taxon_2654588175_annotated_assembly	-	KHT3
Lactobacillus sakei subsp. carnosus DSM 15831	525363	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.98539	41	-	AZFG01	65	2014	1904	11/6/15	4/10/17	Scaffold	Shanghai Majorbio	SAMN02369430	GCA_001435715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/715/GCA_001435715.1_ASM143571v1	26415554	DSM 15831
Arcobacter butzleri L354	1447262	PRJNA233527	233527	Proteobacteria	delta/epsilon subdivisions	2.22179	26.9	-	JAIV01	91	2238	2152	5/19/15	4/3/17	Scaffold	Agriculture and Agri-Foods Canada	SAMN02581422	GCA_001010595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/595/GCA_001010595.1_A.butzleri_L354_1.0	25947176	L354
Xanthomonas albilineans	29447	PRJNA270063	270063	Proteobacteria	Gammaproteobacteria	3.85143	62.8	-	JZIB01	4	3360	3085	3/25/15	4/18/17	Contig	CIRAD	SAMN03262651	GCA_000963025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/025/GCA_000963025.1_Xal-GPE_PC86-G1	-	GPE PC86
Mycobacterium intracellulare M.i.198	1214063	PRJDB193	173913	Terrabacteria group	Actinobacteria	5.40557	68	-	BAGQ01	149	5183	4823	8/28/12	5/19/17	Contig	Osaka City University	SAMD00036621	GCA_000309055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/055/GCA_000309055.1_Mintra_1.0	23105072	M.i.198
Sorangium cellulosum	56	PRJNA237838	237838	Proteobacteria	delta/epsilon subdivisions	10.9138	70.3	-	JELX01	4620	8472	6851	3/11/16	3/11/16	Scaffold	Shandong University	SAMN02639798	GCA_001589195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/589/195/GCA_001589195.1_Sce1.0	-	So0157-18
Kocuria rhizophila	72000	PRJEB9947	307482	Terrabacteria group	Actinobacteria	2.88186	70.8	-	CZJW01	87	2546	2388	1/3/16	4/11/17	Contig	Universitetsparken 15	SAMEA3489747	GCA_001499775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/775/GCA_001499775.1_Draft_genome_of_Kocuria_rhizophila_G2	-	G2
Anoxybacillus flavithermus NBRC 109594	1315967	PRJDB1085	196956	Terrabacteria group	Firmicutes	2.77262	41.7	-	BARH01	90	2887	2746	4/12/13	4/1/17	Contig	Yamaguchi University	SAMD00036730	GCA_000367505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/505/GCA_000367505.1_ASM36750v1	23723406	NBRC 109594
Edwardsiella tarda DT	1027364	PRJNA66369	66369	Proteobacteria	Gammaproteobacteria	3.75958	57	-	AFJJ01	83	3544	3368	5/31/12	3/30/17	Contig	"East China University of Science and Technology, China"	SAMN02469760	GCA_000264825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/825/GCA_000264825.1_ASM26482v1	22590641	DT
Escherichia albertii TW15818	910238	PRJNA56131	56131	Proteobacteria	Gammaproteobacteria	4.72587	49.6	-	AEJY01	392	4809	4426	4/21/11	5/18/17	Contig	"Georgia Institute of Technology, School of Civil and Environmental Engineering"	SAMN02469844	GCA_000208505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/208/505/GCA_000208505.2_ASM20850v2	21482770	TW15818
[Eubacterium] rectale M104/1	657317	PRJNA39161	39161	Terrabacteria group	Firmicutes	3.69842	40.8	chromosome:FP929043.1	-	1	3267	3212	3/25/10	2/27/15	Chromosome	MetaHIT	SAMEA3138357	GCA_000209955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/209/955/GCA_000209955.1_ASM20995v1	-	M104/1
Brevibacillus brevis	1393	PRJDB4879	340143	Terrabacteria group	Firmicutes	6.28069	47.3	-	BDFB01	25	6045	5771	8/24/16	4/13/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00053328	GCA_001748185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/185/GCA_001748185.1_ASM174818v1	-	NBRC 110488
Caldicellulosiruptor bescii	31899	PRJNA371177	371177	Terrabacteria group	Firmicutes	2.93632	35.1	-	NSHE01	1	2854	2599	9/13/17	9/15/17	Contig	DOE Joint Genome Institute	SAMN06296226	GCA_002300505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/505/GCA_002300505.1_ASM230050v1	-	RKCB120
Candidatus Liberibacter asiaticus	34021	PRJNA269509	269509	Proteobacteria	Alphaproteobacteria	1.22725	36.5	-	JWHA01	3	1116	1029	1/20/15	4/17/17	Contig	"Crop Diseases, Pests, Genetics Research Unit, San Joaquin Valley Agricultural Sciences Center, USDA"	SAMN03253432	GCA_000820625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/625/GCA_000820625.1_ASM82062v1	-	FL17
Yersinia ruckeri	29486	PRJNA263861	263861	Proteobacteria	Gammaproteobacteria	3.91379	47.5	-	JRWX01	32	3626	3440	11/11/14	4/2/17	Contig	"Sichuan Agricultural University,Sichuan, P.R. China"	SAMN03112801	GCA_000775355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/355/GCA_000775355.1_ASM77535v1	25573927	SC09
Borrelia hermsii MTW	1313291	PRJNA195594	195594	Spirochaetes	Spirochaetia	1.3194	30.4462	chromosome:NZ_CP005680.1/CP005680.1	-	26	1252	1125	1/27/14	5/28/17	Chromosome	Integrated Genomics	SAMN03081461	GCA_000568795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/795/GCA_000568795.1_ASM56879v1	-	MTW
Yersinia rohdei	29485	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.40565	47.1	-	MWTN01	90	4131	3246	6/14/17	6/14/17	Contig	SRCAMB	SAMN06344234	GCA_002192875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/875/GCA_002192875.1_ASM219287v1	-	SCPM-O-B-7599
Rhodococcus opacus	37919	PRJNA306614	306614	Terrabacteria group	Actinobacteria	8.53431	67.3	-	LRRG01	382	8198	7418	5/18/16	4/5/17	Contig	Northumbria University	SAMN04357312	GCA_001646735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/646/735/GCA_001646735.1_ASM164673v1	-	DSM 43205
Streptococcus equinus ATCC 33317	1210006	PRJNA170434	170434	Terrabacteria group	Firmicutes	1.84189	37.2	-	AUZG01	17	1775	1714	9/2/14	4/2/17	Contig	Frederick National Laboratory for Cancer Research	SAMN01983951	GCA_000747195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/195/GCA_000747195.1_ASM74719v1	25301652	ATCC 33317
Variovorax paradoxus	34073	PRJNA270157	270157	Proteobacteria	Betaproteobacteria	7.23829	67.1	-	JZWI01	111	6886	6678	6/5/15	4/3/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03263608	GCA_001026885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/885/GCA_001026885.1_ASM102688v1	-	TBEA6
Pectobacterium carotovorum subsp. brasiliense	180957	PRJNA269216	269216	Proteobacteria	Gammaproteobacteria	4.81628	52.1	-	JUJE01	15	4322	4138	12/29/14	4/3/17	Scaffold	Beijing Academy of Agriculture and Forestry Sciences	SAMN03252598	GCA_000808195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/195/GCA_000808195.1_ASM80819v1	-	YC D64
Mycobacterium kansasii	1768	PRJNA374853	374853	Terrabacteria group	Actinobacteria	6.43406	66.1	chromosome:NZ_CP019887.1/CP019887.1	-	1	5742	5378	4/11/17	4/13/17	Chromosome	University of Lodz	SAMN06339049	GCA_002085815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/815/GCA_002085815.1_ASM208581v1	-	11MK
Teredinibacter turnerae T8415	1056818	PRJNA82181	82181	Proteobacteria	Gammaproteobacteria	5.15835	50.8	-	ATYI01	50	4356	4200	7/15/13	4/2/17	Scaffold	JGI	SAMN02440596	GCA_000427605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/605/GCA_000427605.1_ASM42760v1	-	T8415
Brachyspira hyodysenteriae	159	PRJNA326554	326554	Spirochaetes	Spirochaetia	3.19345	27.6	-	MAOX01	474	2699	2586	4/14/17	5/6/17	Contig	Murdoch University	SAMN05284666	GCA_002117515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/515/GCA_002117515.1_ASM211751v1	27489956	JR2
Dickeya zeae MK19	1224153	PRJNA172959	172959	Proteobacteria	Gammaproteobacteria	4.67215	53.6028	chromosome:NZ_CM001985.1/CM001985.1	AOOR01	4	4233	4090	6/4/13	4/1/17	Chromosome	James Hutton Institute	SAMN02470105	GCA_000406325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/325/GCA_000406325.1_DZEMK19_1.0	24265502	MK19
Lactobacillus crispatus FB049-03	883094	PRJNA52107	52107	Terrabacteria group	Firmicutes	2.45938	37.5	-	AGZF01	5	2460	2214	9/18/12	3/30/17	Scaffold	Broad Institute	SAMN02463886	GCA_000301115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/115/GCA_000301115.1_Lact_cris_FB049-03_V1	-	FB049-03
Aggregatibacter actinomycetemcomitans Y4	1035194	PRJNA67199	67199	Proteobacteria	Gammaproteobacteria	2.1865	44.2	-	AMEN01	87	2189	2025	12/10/12	4/1/17	Scaffold	Washington University Genome Center	SAMN02436929	GCA_000318155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/155/GCA_000318155.1_ASM31815v1	-	Y4
Rothia mucilaginosa	43675	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.25757	59.6	-	JUSX01	237	1819	1662	7/10/15	4/3/17	Contig	University of Washington	SAMN03197999	GCA_001067345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/345/GCA_001067345.1_ASM106734v1	26230489	788_RMUC
Streptomyces albus J1074	457425	PRJNA32149	32149	Terrabacteria group	Actinobacteria	6.82367	72.3	-	ABYC01	2	6028	5446	12/12/08	5/19/17	Scaffold	Broad Institute	SAMN02595235	GCA_000156475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/475/GCA_000156475.1_ASM15647v1	-	J1074
Escherichia fergusonii	564	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.23612	50.4	-	LORS01	1	5438	4957	12/21/15	2/25/17	Contig	US Food and Drug Administration 	SAMN03996315	GCA_001471755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/755/GCA_001471755.1_ASM147175v1	-	FDAARGOS_170
Streptococcus intermedius F0413	883167	PRJNA52089	52089	Terrabacteria group	Firmicutes	1.92237	37.6	-	AFXO01	8	1961	1806	11/2/11	3/30/17	Scaffold	Broad Institute	SAMN02463882	GCA_000234035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/035/GCA_000234035.1_Stre_inte_F0413_V1	-	F0413
Streptomyces hygroscopicus subsp. hygroscopicus	68042	PRJDB3202	311022	Terrabacteria group	Actinobacteria	10.1416	72	-	BBOU01	133	8449	7832	2/2/16	3/13/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00021056	GCA_001553435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/435/GCA_001553435.1_ASM155343v1	-	NBRC 16556
Streptomyces viridochromogenes	1938	PRJNA369760	369760	Terrabacteria group	Actinobacteria	7.33332	72.1	-	MUML01	757	6904	6206	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06294989	GCA_002156055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/055/GCA_002156055.1_ASM215605v1	-	NRRL B-24167
Mycoplasma hyorhinis ATCC 17981	634996	PRJNA183035	183035	Terrabacteria group	Tenericutes	0.806507	25.9	-	ARTL01	24	743	659	4/26/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441640	GCA_000383515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/515/GCA_000383515.1_ASM38351v1	-	BTS7
Aggregatibacter aphrophilus	732	PRJNA327278	327278	Proteobacteria	Gammaproteobacteria	2.26867	42.2	-	MAQF01	32	2188	2060	7/6/16	7/24/17	Scaffold	Menzies School of Health Research	SAMN05327945	GCA_001680765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/765/GCA_001680765.1_ASM168076v1	28604066	ATCC 19415
Acidithiobacillus caldus	33059	PRJNA325710	325710	Proteobacteria	Acidithiobacillia	2.79279	60.9	-	LZYH01	1208	2906	2396	10/11/16	2/14/17	Contig	Central South University	SAMN05250861	GCA_001756775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/775/GCA_001756775.1_ASM175677v1	27999570	S1
Lactobacillus jensenii IM11	1434652	PRJNA231005	231005	Terrabacteria group	Firmicutes	1.61483	34	-	AZNO01	91	1520	1435	5/22/15	4/3/17	Scaffold	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN02438378	GCA_001012655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/655/GCA_001012655.1_IM11v1	-	IM11
Lactobacillus ruminis	1623	PRJNA239220	239220	Terrabacteria group	Firmicutes	2.02588	43.4	-	JHAJ01	121	2050	1846	5/18/15	4/3/17	Contig	Teagasc Food Research Centre	SAMN02650410	GCA_001008755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/755/GCA_001008755.1_ASM100875v1	25879663	ATCC 27780
Bacteroides dorei	357276	PRJNA377666	377666	FCB group	Bacteroidetes/Chlorobi group	5.37136	41.8	-	NFKX01	43	4479	4245	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473628	GCA_002160605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/605/GCA_002160605.1_ASM216060v1	-	An16
Gardnerella vaginalis JCP8522	1261071	PRJNA181326	181326	Terrabacteria group	Actinobacteria	1.47449	42.2	-	ATJE01	151	1252	1094	6/25/13	4/10/17	Scaffold	Washington University	SAMN02436909	GCA_000414425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/425/GCA_000414425.1_ASM41442v1	-	JCP8522
Prevotella bivia DNF00320	1401068	PRJNA219665	219665	FCB group	Bacteroidetes/Chlorobi group	2.58422	40	-	JRNQ01	179	2284	2133	9/26/14	4/2/17	Contig	J. Craig Venter Institute	SAMN02850966	GCA_000759245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/245/GCA_000759245.1_04_NF40_HMP647v01	-	DNF00320
Rothia dentocariosa	2047	PRJNA375758	375758	Terrabacteria group	Actinobacteria	2.4699	53.7	-	NCWU01	85	2132	2023	8/29/17	8/30/17	Contig	SysMilk	SAMN06718484	GCA_002276695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/695/GCA_002276695.1_ASM227669v1	-	OG2-1
Providencia alcalifaciens PAL-1	1256991	PRJNA181047	181047	Proteobacteria	Gammaproteobacteria	4.10837	42.5	-	JALA01	28	3871	3738	1/31/14	4/2/17	Contig	JCVI	SAMN02641582	GCA_000527275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/275/GCA_000527275.1_PalPAL1v1.0	-	PAL-1
Bifidobacterium pseudocatenulatum	28026	PRJEB10915	297013	Terrabacteria group	Actinobacteria	2.30387	56.5	-	CYZC01	10	1995	1871	10/1/15	4/4/17	Contig	SC	SAMEA3545306	GCA_001405035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/035/GCA_001405035.1_13470_2_59	-	2789STDY5834840
Lactobacillus brevis	1580	PRJNA313253	313253	Terrabacteria group	Firmicutes	2.66787	45.704	chromosome:NZ_CP019750.1/CP019750.1; plasmid pl12113-1:NZ_CP019751.1/CP019751.1; plasmid pl12113-2:NZ_CP019752.1/CP019752.1; plasmid pl12113-3:NZ_CP019753.1/CP019753.1; plasmid pl12113-4:NZ_CP019754.1/CP019754.1	-	5	2633	2321	5/2/17	5/6/17	Complete Genome	Technische Universitaet Muenchen	SAMN04517634	GCA_002117325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/325/GCA_002117325.1_ASM211732v1	-	TMW 1.2113
Staphylococcus hominis	1290	PRJNA272632	272632	Terrabacteria group	Firmicutes	2.11314	31.5	-	LFKQ01	17	2090	1953	7/10/15	4/10/17	Contig	The Pennsylvania State University	SAMN03433700	GCA_001051905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/905/GCA_001051905.1_ASM105190v1	26966197	As1
Enterobacter cancerogenus	69218	PRJNA278420	278420	Proteobacteria	Gammaproteobacteria	4.86947	55.6	-	LDQJ01	45	4715	4507	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401388	GCA_001475985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/985/GCA_001475985.1_ASM147598v1	26793183	NS31
Staphylococcus capitis QN1	1189311	PRJNA159795	159795	Terrabacteria group	Firmicutes	2.4301	32.8	-	AJTH01	30	2381	2234	5/22/12	3/30/17	Contig	Zhejiang University	SAMN02471139	GCA_000263775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/775/GCA_000263775.1_StacapQN11.0	-	QN1
Acinetobacter radioresistens DSM 6976 = NBRC 102413 = CIP 103788	981334	PRJDB54	84207	Proteobacteria	Gammaproteobacteria	3.36608	41.3	-	BAGY01	95	3255	3116	8/30/12	7/12/17	Contig	National Institute of Technology and Evaluation	SAMD00041796	GCA_000308075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/075/GCA_000308075.1_ASM30807v1	-	NBRC 102413
Staphylococcus warneri	1292	PRJNA255947	255947	Terrabacteria group	Firmicutes	2.51028	32.6	-	JPOW01	12	2447	2331	7/30/14	4/2/17	Contig	Cork Institute of Technology	SAMN02937305	GCA_000736475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/475/GCA_000736475.1_ASM73647v1	25189586	NGS-ED-1001
Eikenella corrodens	539	PRJNA310649	310649	Proteobacteria	Betaproteobacteria	2.40829	55.7	-	LXSH01	35	2437	2318	5/19/16	4/5/17	Contig	Public Health Agency of Canada	SAMN04931632	GCA_001648265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/265/GCA_001648265.1_ASM164826v1	-	NML120819
Corynebacterium striatum	43770	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.9052	59.2	-	JVTL01	94	2756	2568	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197309	GCA_001053435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/435/GCA_001053435.1_ASM105343v1	26230489	1329_CAUR
Corynebacterium aurimucosum	169292	PRJNA267549	267549	Terrabacteria group	Actinobacteria	8.68621	64.5	-	JWAB01	1499	-	-	7/10/15	7/13/16	Scaffold	University of Washington	SAMN03197137	GCA_001052925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/925/GCA_001052925.1_ASM105292v1	26230489	118_CAUR
Hungatella hathewayi	154046	PRJNA348753	348753	Terrabacteria group	Firmicutes	5.92854	49.6	-	DCJG01	235	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06451243	GCA_002317485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/485/GCA_002317485.1_ASM231748v1	28894102	-
Rhodococcus hoagii	43767	PRJNA306614	306614	Terrabacteria group	Actinobacteria	5.30662	68.7	-	LRQZ01	156	5034	4769	5/18/16	6/6/17	Contig	Northumbria University	SAMN04357307	GCA_001646905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/646/905/GCA_001646905.1_re12	-	N1295
Helicobacter bilis	37372	PRJNA261711	261711	Proteobacteria	delta/epsilon subdivisions	2.55113	34.8	-	JRPJ01	82	2360	2002	10/10/14	4/2/17	Scaffold	Massachusetts Institute of Technology	SAMN03075569	GCA_000765925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/925/GCA_000765925.1_ASM76592v1	-	ATCC 49320
Lactobacillus iners SPIN 2503V10-D	879296	PRJNA52031	52031	Terrabacteria group	Firmicutes	1.2839	32.6	-	AEHR01	31	1256	1106	10/5/10	3/30/17	Contig	J. Craig Venter Institute	SAMN00115035	GCA_000149145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/149/145/GCA_000149145.2_ASM14914v1	-	SPIN 2503V10-D
Bacillus atrophaeus str. Dugway	882453	PRJNA34819	34819	Terrabacteria group	Firmicutes	4.13395	43.1	-	AEFO01	53	4216	3949	4/19/11	6/15/17	Contig	Transformational Medical Technologies Program	SAMN01816414	GCA_000204685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/685/GCA_000204685.2_ASM20468v2	21464989	Dugway
Candidatus Planktophila vernalis	1884907	PRJNA327031	327031	Terrabacteria group	Actinobacteria	1.364	45.7	chromosome:NZ_CP016776.1/CP016776.1	-	1	1407	1358	9/8/17	10/2/17	Complete Genome	University of Zurich	SAMN05296533	GCA_002288185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/185/GCA_002288185.1_ASM228818v1	-	-
Ruminococcus flavefaciens 17	1030842	PRJNA66749	66749	Terrabacteria group	Firmicutes	3.45494	44.9	-	AFNE01	489	3321	2762	2/10/12	4/11/17	Contig	University of Illinois	SAMN02471822	GCA_000247525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/525/GCA_000247525.2_ASM24752v2	22004549	17
Acinetobacter nosocomialis TG21145	1221308	PRJNA172715	172715	Proteobacteria	Gammaproteobacteria	4.10325	38.7	-	AMJH01	39	4027	3845	10/2/12	3/30/17	Contig	Translational Genomics Research Institute	SAMN02471244	GCA_000301775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/775/GCA_000301775.1_ASM30177v1	-	TG21145
Streptomyces griseus subsp. rhodochrous	285575	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.08652	72.6	-	JODO01	228	7079	6777	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645212	GCA_000719035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/035/GCA_000719035.1_ASM71903v1	-	NRRL B-1691
Ochrobactrum intermedium M86	1234597	PRJNA302728	302728	Proteobacteria	Alphaproteobacteria	4.68176	57.7	-	LPQX01	121	4458	4304	2/13/17	2/22/17	Contig	"CSIR-National Chemical Laboratory, Pune"	SAMN04279001	GCA_001996385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/385/GCA_001996385.1_ASM199638v1	-	M86
Streptococcus oralis	1303	PRJNA304333	304333	Terrabacteria group	Firmicutes	1.96503	41.1	-	LQOG01	25	1920	1807	3/2/16	4/5/17	Scaffold	University of Kaiserslautern	SAMN04324324	GCA_001578705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/705/GCA_001578705.1_ASM157870v1	27303717	DD05
Achromobacter xylosoxidans C54	562971	PRJNA38739	38739	Proteobacteria	Betaproteobacteria	6.51472	66.7	-	ACRC01	262	6059	5434	1/11/11	5/18/17	Scaffold	Broad Institute	SAMN02463749	GCA_000186185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/185/GCA_000186185.1_Achr_xylo_C54_V2	-	C54
Butyrivibrio fibrisolvens AB2020	1280697	PRJNA185709	185709	Terrabacteria group	Firmicutes	4.73557	39.8	-	ATVZ01	170	4023	3819	7/9/13	4/1/17	Contig	DOE Joint Genome Institute	SAMN02441239	GCA_000420985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/985/GCA_000420985.1_ASM42098v1	-	AB2020
Bacteroides xylanisolvens SD CC 2a	702444	PRJEB4577	237286	FCB group	Bacteroidetes/Chlorobi group	6.22859	42	-	CBXH01	68	5076	4709	2/11/14	4/2/17	Scaffold	NATIONALCENTERFORGENOMERESOURCES	SAMEA3138944	GCA_000577955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/955/GCA_000577955.1_SD_CC_2a	-	-
Candidatus Liberibacter solanacearum	556287	PRJNA312061	312061	Proteobacteria	Alphaproteobacteria	1.24512	35.2	-	LWEB01	5	1138	1017	2/2/17	4/6/17	Contig	University of Helsinki	SAMN04493263	GCA_001983675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/675/GCA_001983675.1_ASM198367v1	28158295	FIN114
Xanthomonas fuscans subsp. fuscans	366649	PRJNA263153	263153	Proteobacteria	Gammaproteobacteria	5.233	64.7	-	JRRE02	152	4743	4214	10/8/14	4/3/17	Contig	University of Exeter	SAMN03097370	GCA_000764875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/875/GCA_000764875.2_NCPPB670v2	26500625	NCPPB 670
Pseudomonas syringae pv. primulae	251707	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.89479	59.3	-	LJRC01	310	5368	5064	10/20/15	4/4/17	Scaffold	University of Toronto	SAMN03976262	GCA_001400635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/635/GCA_001400635.1_PprICMP3956	-	ICMP3956
Pseudomonas savastanoi pv. retacarpa	663708	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.67292	58.1	-	LJRD01	510	5352	4686	10/20/15	4/21/17	Scaffold	University of Toronto	SAMN03976259	GCA_001400935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/935/GCA_001400935.1_PreICMP16945	-	ICMP16945
Pseudomonas coronafaciens pv. porri	83964	PRJNA266491	266491	Proteobacteria	Gammaproteobacteria	6.24006	57.4	-	JUEU01	369	5917	5486	8/31/15	4/4/17	Contig	Institute for Agricultural and Fisheries Research (ILVO)	SAMN03165649	GCA_001275735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/735/GCA_001275735.1_ASM127573v1	-	LMG 28496
Acinetobacter calcoaceticus DSM 30006 = CIP 81.8	981331	PRJNA183274	183274	Proteobacteria	Gammaproteobacteria	3.92966	38.7	-	APQI01	7	3808	3632	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN01828159	GCA_000368965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/965/GCA_000368965.1_Acin_calc_CIP_81_8_V1	-	CIP 81.8
Acinetobacter johnsonii	40214	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.46957	41.3	-	BBTB01	123	3399	3255	2/10/15	4/3/17	Contig	National Institute of Technology and Evaluation	SAMD00019881	GCA_000949655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/655/GCA_000949655.1_ASM94965v1	-	DSM 6963
Acinetobacter junii MTCC 11364	1330047	PRJNA201035	201035	Proteobacteria	Gammaproteobacteria	3.54957	38.3	-	ASYZ01	248	3421	3126	7/16/13	4/1/17	Contig	Institute of Microbial Technology	SAMN02469990	GCA_000430225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/225/GCA_000430225.1_Acinetobacter_junii	-	MTCC 11364
Pseudoalteromonas sp. P1-8	1710353	PRJNA294442	294442	Proteobacteria	Gammaproteobacteria	4.48865	41.2	-	LJSO01	29	4015	3931	10/20/15	8/28/17	Scaffold	Hans Knoell Institute	SAMN04026652	GCA_001399985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/985/GCA_001399985.1_ASM139998v1	26659670	P1-8
Acinetobacter lwoffii NIPH 478	1217668	PRJNA183261	183261	Proteobacteria	Gammaproteobacteria	3.30126	42.9	-	APQU01	9	3144	2962	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN01087833	GCA_000369145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/145/GCA_000369145.1_Acin_lwof_NIPH_478_V1	-	NIPH 478
Vibrio fluvialis	676	PRJNA293803	293803	Proteobacteria	Gammaproteobacteria	4.52416	50	-	LKHR01	252	4216	4040	10/28/15	4/4/17	Contig	Technical University of Denmark	SAMN04009994	GCA_001418705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/705/GCA_001418705.1_ASM141870v1	-	S1110
Pantoea stewartii	66269	PRJNA292338	292338	Proteobacteria	Gammaproteobacteria	4.65461	53.8	-	LIHC01	19	4374	4200	10/13/15	4/4/17	Contig	Agriculture and Agri-Food Canada	SAMN03968921	GCA_001310285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/285/GCA_001310285.1_Pantoea_stewartii_A206_1.0	-	A206
Cronobacter turicensis	413502	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.5206	56.7	-	DCLR01	409	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451426	GCA_002321135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/135/GCA_002321135.1_ASM232113v1	28894102	-
Cylindrospermopsis raciborskii CENA303	1170769	PRJNA381695	381695	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.3986	40.3	-	NBYN01	77	3127	2933	4/28/17	5/3/17	Contig	CENA/USP	SAMN06579177	GCA_002114155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/155/GCA_002114155.1_ASM211415v1	-	CENA303
Bacillus licheniformis	1402	PRJNA290971	290971	Terrabacteria group	Firmicutes	4.47554	45.7	chromosome:NZ_CP014793.1/CP014793.1	-	1	4680	4455	3/29/17	4/1/17	Complete Genome	Chonbuk National University	SAMN03938153	GCA_002074115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/115/GCA_002074115.1_ASM207411v1	-	SCDB 34
Pediococcus acidilactici 7_4	563194	PRJNA40051	40051	Terrabacteria group	Firmicutes	2.01799	42	-	ACXB01	9	1980	1853	11/23/09	3/30/17	Scaffold	Broad Institute	SAMN02463809	GCA_000163095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/095/GCA_000163095.1_ASM16309v1	-	7_4
Vibrio owensii	696485	PRJNA314425	314425	Proteobacteria	Gammaproteobacteria	5.8902	45.7	chromosome 1:NZ_CP019959.1/CP019959.1; chromosome 2:NZ_CP019960.1/CP019960.1	-	2	5380	5138	3/6/17	3/9/17	Complete Genome	Hainan University	SAMN05213947	GCA_002021755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/755/GCA_002021755.1_ASM202175v1	-	XSBZ03
Vibrio mimicus VM223	675820	PRJNA40483	40483	Proteobacteria	Gammaproteobacteria	4.34797	46.2	-	ADAJ01	8	4280	4000	10/23/09	5/19/17	Contig	"Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR)"	SAMN02393815	GCA_000176415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/415/GCA_000176415.1_ASM17641v1	21078967	VM223
Vibrio coralliilyticus P1	909421	PRJNA56079	56079	Proteobacteria	Gammaproteobacteria	5.51326	45.7	-	AEQS01	255	5220	4912	4/8/11	5/19/17	Contig	Federal University of Rio de Janeiro	SAMN02469785	GCA_000195475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/475/GCA_000195475.2_ASM19547v2	21451583	P1
Parageobacillus thermoglucosidans	1426	PRJNA279458	279458	Terrabacteria group	Firmicutes	3.90714	43.7	-	LAKX01	72	4016	3693	3/30/15	4/3/17	Contig	"CAS Key Laboratory of Microbial Physiological and Metabolic Engineering, Institute of Microbiology"	SAMN03447989	GCA_000966225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/225/GCA_000966225.1_DSM2542-Assem1	-	DSM 2542
Enterobacter asburiae	61645	PRJNA311957	311957	Proteobacteria	Gammaproteobacteria	4.69964	56.1	-	LSQV01	25	4552	4377	6/23/16	4/20/17	Scaffold	Sultan Qaboos University	SAMN04490973	GCA_001675835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/835/GCA_001675835.1_CLC_Genomics_Workbench	-	PDA134
Brucella sp. NVSL 07-0026	520448	PRJNA36511	36511	Proteobacteria	Alphaproteobacteria	3.29714	57.1	-	ACXD01	17	3359	2904	4/1/10	4/17/17	Scaffold	Broad Institute	SAMN02595355	GCA_000163135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/135/GCA_000163135.1_ASM16313v1	-	NVSL 07-0026
Pseudomonas amygdali pv. aesculi str. NCPPB 3681	665027	PRJNA39839	39839	Proteobacteria	Gammaproteobacteria	5.89616	58.1	-	ACXS01	557	5595	4963	8/21/09	5/19/17	Scaffold	The Sainsbury Laboratory	SAMN00002867	GCA_000163255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/255/GCA_000163255.1_ASM16325v1	20419105	NCPPB 3681
Xanthomonas euvesicatoria	456327	PRJNA275503	275503	Proteobacteria	Gammaproteobacteria	5.32103	64.5	-	JZRR01	124	4809	4387	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03349340	GCA_001009135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/135/GCA_001009135.1_ASM100913v1	-	685
Acinetobacter pittii ATCC 19004 = CIP 70.29	1311774	PRJNA183266	183266	Proteobacteria	Gammaproteobacteria	3.83031	38.9	-	APQP01	13	3657	3472	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN01828154	GCA_000369045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/045/GCA_000369045.1_Acin_pitt_CIP_70_29_V1	-	CIP 70.29
Veillonella parvula	29466	PRJNA305444	305444	Terrabacteria group	Firmicutes	1.06854	38.8	-	LOJO01	7	966	924	1/5/16	3/1/16	Scaffold	University of Washington	SAMN04325242	GCA_001487025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/025/GCA_001487025.1_ASM148702v1	26893419	SHI-1
Bacillus cytotoxicus	580165	PRJNA394959	394959	Terrabacteria group	Firmicutes	4.33649	35.9	-	NOKB01	2	4532	4076	8/14/17	8/16/17	Contig	University of Zurich	SAMN07367964	GCA_002251005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/005/GCA_002251005.1_ASM225100v1	-	CH_39
Bartonella apis	1686310	PRJNA312661	312661	Proteobacteria	Alphaproteobacteria	2.90721	45.7	chromosome:NZ_CP015625.1/CP015625.1	-	1	2546	2445	2/28/17	3/2/17	Complete Genome	University of Lausanne	SAMN04505061	GCA_002007565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/565/GCA_002007565.1_ASM200756v1	-	BBC0122
Paenibacillus polymyxa	1406	PRJNA352445	352445	Terrabacteria group	Firmicutes	5.62173	45.7	chromosome:NZ_CP017967.1/CP017967.2	-	1	4937	4670	11/10/16	4/5/17	Complete Genome	Shandong Agricultural University	SAMN05981091	GCA_001874405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/405/GCA_001874405.2_ASM187440v2	-	YC0136
Streptococcus constellatus	76860	PRJNA270120	270120	Terrabacteria group	Firmicutes	1.96575	38	-	JWIY01	5	1951	1836	1/2/15	4/2/17	Contig	Chosun University	SAMN03263055	GCA_000814045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/045/GCA_000814045.1_ASM81404v1	-	KCOM 1650
Streptococcus anginosus 1_2_62CV	742820	PRJNA46427	46427	Terrabacteria group	Firmicutes	1.82106	38.8	-	ADME01	7	1826	1693	1/21/11	3/30/17	Scaffold	Broad Institute	SAMN02463868	GCA_000186545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/545/GCA_000186545.1_Strep_angi_1_2_62CV_V1	-	1_2_62CV
Pantoea ananatis BRT175	1332074	PRJNA202242	202242	Proteobacteria	Gammaproteobacteria	4.85295	53.7	-	ASJH01	38	4564	4374	9/30/13	4/2/17	Scaffold	University of Regina	SAMN02471932	GCA_000475035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/035/GCA_000475035.1_ASM47503v1	24201193	BRT175
Paenibacillus polymyxa	1406	PRJNA295948	295948	Terrabacteria group	Firmicutes	5.75694	45.7	chromosome:NZ_CP015423.1/CP015423.1	-	1	5175	4824	9/6/16	4/5/17	Complete Genome	Northwest University	SAMN04095573	GCA_001719045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/045/GCA_001719045.1_ASM171904v1	-	J
Acinetobacter haemolyticus TG19602	1221298	PRJNA172709	172709	Proteobacteria	Gammaproteobacteria	3.57895	39.4	-	AMJB01	382	3448	3196	10/2/12	3/30/17	Contig	Translational Genomics Research Institute	SAMN02471288	GCA_000309035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/035/GCA_000309035.1_ASM30903v1	-	TG19602
Helicobacter suis HS1	710393	PRJEB15617	356153	Proteobacteria	delta/epsilon subdivisions	1.62272	40	-	FMSS01	97	1676	1528	12/4/16	4/6/17	Scaffold	GHENT UNIVERSITY	SAMEA4476652	GCA_900099095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/095/GCA_900099095.1_HS1_output_strain2	-	-
Amycolatopsis mediterranei	33910	PRJNA255942	255942	Terrabacteria group	Actinobacteria	10.3355	71.3	-	JPRA01	114	9713	9449	9/23/16	4/5/17	Scaffold	CNR	SAMN02934076	GCA_001742805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/805/GCA_001742805.1_ASM174280v1	25149266	HP-130
Pantoea vagans	470934	PRJNA396982	396982	Proteobacteria	Gammaproteobacteria	4.94223	55.2	-	NRSO01	6	4615	4408	9/8/17	9/11/17	Contig	Yeungnam University	SAMN07445198	GCA_002287745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/745/GCA_002287745.1_ASM228774v1	-	TYU1
Lysinibacillus fusiformis	28031	PRJNA406962	406962	Terrabacteria group	Firmicutes	4.68126	37.4	-	NTMQ01	17	4646	4430	9/25/17	9/25/17	Scaffold	Kazan Federal University	SAMN07635132	GCA_002358065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/358/065/GCA_002358065.1_ASM235806v1	-	GM
Komagataeibacter hansenii	436	PRJNA343809	343809	Proteobacteria	Alphaproteobacteria	3.34258	59.8	-	MJME01	125	2922	2780	1/6/17	4/6/17	Scaffold	University of Texas at Austin	SAMN05803078	GCA_001938835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/835/GCA_001938835.1_ASM193883v1	-	HUM-1
Streptococcus gallolyticus	315405	PRJNA304333	304333	Terrabacteria group	Firmicutes	2.53048	38	-	LQOF01	195	2456	2013	3/2/16	4/5/17	Scaffold	University of Kaiserslautern	SAMN04324321	GCA_001578695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/695/GCA_001578695.1_ASM157869v1	27303717	DD02
Mycoplasma ovipneumoniae	29562	PRJNA253511	253511	Terrabacteria group	Tenericutes	1.00012	29.1	-	JOTK01	85	748	658	8/26/16	4/5/17	Scaffold	Southwest University for Nationalities	SAMN02870888	GCA_001715105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/105/GCA_001715105.1_ASM171510v1	-	TC8
Blautia sp. YL58	1796616	PRJNA317592	317592	Terrabacteria group	Firmicutes	5.12875	45.7	chromosome:NZ_CP015405.2/CP015405.2	-	1	4810	4527	7/20/16	4/17/17	Complete Genome	University of Bern	SAMN04621619	GCA_001689125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/125/GCA_001689125.2_ASM168912v2	-	YL58
Prevotella bryantii	77095	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.83407	38.6	-	DFTF01	20	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450692	GCA_002381515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/515/GCA_002381515.1_ASM238151v1	28894102	-
Leptospira santarosai str. CBC379	1049978	PRJNA74145	74145	Spirochaetes	Spirochaetia	4.17021	41.7	-	AHOE02	69	4315	3851	1/24/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436503	GCA_000244555.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/555/GCA_000244555.3_gls454163v02	-	CBC379
Moraxella bovoculi	386891	PRJNA282717	282717	Proteobacteria	Gammaproteobacteria	2.18475	45.7	chromosome:NZ_CP011377.1/CP011377.1	-	1	2118	1947	5/6/15	4/3/17	Complete Genome	USDA	SAMN03577765	GCA_000988655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/655/GCA_000988655.1_ASM98865v1	-	23343
Brevundimonas diminuta	293	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.14806	68	-	NCDT01	593	2538	2198	8/16/17	8/16/17	Scaffold	None	SAMN06622365	GCA_002280325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/325/GCA_002280325.1_ASM228032v1	-	-
[Clostridium] clostridioforme 90A4	999405	PRJNA64861	64861	Terrabacteria group	Firmicutes	5.87149	48.6	-	AGYM01	48	5855	5476	4/19/13	5/19/17	Scaffold	Broad Institute	SAMN02596763	GCA_000371565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/565/GCA_000371565.1_Clos_clos_90A4_V1	-	90A4
Fusobacterium necrophorum BFTR-1	1441734	PRJNA232679	232679	Fusobacteria	Fusobacteriia	2.53232	33.9	-	JAAE01	304	2362	2156	5/15/14	4/2/17	Contig	"Newport Laboratories, A Sanofi company"	SAMN02781284	GCA_000691685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/685/GCA_000691685.1_FnecBFTR-1v1.0	-	BFTR-1
Streptococcus parasanguinis F0449	1095733	PRJNA75149	75149	Terrabacteria group	Firmicutes	2.08233	41.9	-	AJMV01	134	1968	1891	4/30/12	3/30/17	Contig	J. Craig Venter Institute	SAMN00761820	GCA_000260695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/695/GCA_000260695.1_SparasanguinisF0449v1.0	-	F0449
Capnocytophaga canimorsus	28188	PRJEB8038	270921	FCB group	Bacteroidetes/Chlorobi group	2.50441	36.1	-	CDOJ01	206	2327	1779	1/20/15	4/10/17	Contig	"BIOZENTRUM, UNIVERSITY OF BASEL"	SAMEA3180117	GCA_000947275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/275/GCA_000947275.1_Cc2.1	-	Cc2
Agrobacterium sp. ATCC 31749	82789	PRJNA48083	48083	Proteobacteria	Alphaproteobacteria	5.46192	59	-	AECL01	95	5319	5092	5/23/11	5/18/17	Contig	Georgia Institute of Technology	SAMN02469831	GCA_000214615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/615/GCA_000214615.2_Agro31749_1.0	21685288	ATCC 31749
Haemophilus parainfluenzae	729	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.96585	39.5	-	JVHG01	26	1925	1837	7/10/15	4/3/17	Contig	University of Washington	SAMN03197626	GCA_001055095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/095/GCA_001055095.1_ASM105509v1	26230489	432_HPAR
Streptococcus infantis	68892	PRJNA274768	274768	Terrabacteria group	Firmicutes	2.02469	39.8	-	JYOV01	29	1982	1841	3/25/15	4/3/17	Contig	University at Buffalo	SAMN03334905	GCA_000963255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/255/GCA_000963255.1_ASM96325v1	25999552	UC6950A
Actinomyces oris	544580	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.25076	68.1	-	MSKM01	86	2774	2564	1/5/17	4/6/17	Scaffold	King's College London	SAMN05898728	GCA_001937385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/385/GCA_001937385.1_ASM193738v1	-	MMRCO6-1
Bacillus subtilis BEST7613	1204343	PRJDB112	183920	Terrabacteria group	Firmicutes	7.58547	45.7	chromosome:AP012495.1	-	1	7430	7270	10/3/12	10/7/16	Complete Genome	"Department of Bioscience, Tokyo University of Agriculture"	SAMD00061008	GCA_000328745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/745/GCA_000328745.1_ASM32874v1	-	BEST7613
Atopobium parvulum DSM 20469	521095	PRJNA29401	29401	Terrabacteria group	Actinobacteria	1.54381	45.7	chromosome:NC_013203.1/CP001721.1	-	1	1412	1353	9/9/09	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00001907	GCA_000024225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/225/GCA_000024225.1_ASM2422v1	21304653	DSM 20469
Sinorhizobium fredii CCBAU 25509	1128330	PRJNA77219	77219	Proteobacteria	Alphaproteobacteria	6.58002	62.2	-	AJQN01	443	6576	5849	5/3/12	5/19/17	Contig	China Agricultural University	SAMN02469478	GCA_000261865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/865/GCA_000261865.1_25509	22586130	CCBAU 25509
Mycoplasma hominis	2098	PRJNA258573	258573	Terrabacteria group	Tenericutes	0.71644	26.8	-	JRHE01	15	631	557	9/29/14	4/2/17	Contig	Federal Budget Institution of Science Central Research Institute for Epidemiology	SAMN03000700	GCA_000759385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/385/GCA_000759385.1_ASM75938v1	-	H34
Myroides odoratimimus H1bi	1416760	PRJNA226212	226212	FCB group	Bacteroidetes/Chlorobi group	3.87632	34	-	AYMS01	183	3506	3260	4/18/14	4/2/17	Contig	University of Malaya	SAMN02729861	GCA_000633375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/375/GCA_000633375.1_de_novo	-	H1bi
Sphingobium yanoikuyae	13690	PRJNA312734	312734	Proteobacteria	Alphaproteobacteria	5.10218	64.4	-	LSVG01	105	4835	4656	4/8/16	4/5/17	Scaffold	"Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences"	SAMN04505668	GCA_001618245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/245/GCA_001618245.1_ASM161824v1	27313307	TJ
Streptococcus parauberis	1348	PRJNA273857	273857	Terrabacteria group	Firmicutes	1.99927	35.5	-	LIXR01	14	2061	1950	3/29/16	4/5/17	Contig	Norfolk State University	SAMN03322817	GCA_001601885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/885/GCA_001601885.1_SparN11v1	-	N11
Leuconostoc lactis	1246	PRJNA397634	397634	Terrabacteria group	Firmicutes	1.74151	43.3	-	NQLF01	2	1759	1658	9/6/17	9/8/17	Contig	Gachon University	SAMN07482638	GCA_002287365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/365/GCA_002287365.1_ASM228736v1	-	CCK940
Kingella kingae AA068	1305792	PRJEB1647	194492	Proteobacteria	Betaproteobacteria	1.99294	46.6	-	CBQV01	1	1933	1657	8/14/13	4/2/17	Scaffold	URMITE	SAMEA2272648	GCA_000469845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/845/GCA_000469845.1_AA068	-	AA068
Streptococcus pseudopneumoniae	257758	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.04346	39.5	-	JWAJ01	155	2011	1865	7/10/15	4/3/17	Contig	University of Washington	SAMN03197129	GCA_001068775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/775/GCA_001068775.1_ASM106877v1	26230489	1172_SPSE
Streptococcus cristatus	45634	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.01577	42.4	-	JWGG01	107	2011	1926	7/10/15	4/3/17	Contig	University of Washington	SAMN03196976	GCA_001069055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/055/GCA_001069055.1_ASM106905v1	26230489	1014_SOLI
Xenorhabdus doucetiae	351671	PRJEB4255	232763	Proteobacteria	Gammaproteobacteria	4.20365	45.6988	chromosome:NZ_FO704550.1/FO704550.1; plasmid XD_p:NZ_FO704549.1/FO704549.1	-	2	3725	3462	6/30/14	4/17/17	Complete Genome	Genoscope CEA	SAMEA3283113	GCA_000968195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/195/GCA_000968195.1_ASM96819v1	-	FRM16
Weissella cibaria	137591	PRJNA268711	268711	Terrabacteria group	Firmicutes	2.35713	44.9	-	JWHV01	60	2227	2062	2/19/15	4/3/17	Contig	CIT / UCC	SAMN03223849	GCA_000878215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/215/GCA_000878215.1_ASM87821v1	25678547	ff3PR
Xanthomonas perforans	442694	PRJNA276614	276614	Proteobacteria	Gammaproteobacteria	5.35407	64.6	-	JZVF01	50	4855	4552	5/18/15	4/3/17	Contig	Universidade de Sao Paulo	SAMN03378979	GCA_001009445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/445/GCA_001009445.1_v1	26089818	Xp11-2
Xanthomonas vesicatoria	56460	PRJNA266920	266920	Proteobacteria	Gammaproteobacteria	5.16628	64.2	-	JTEG01	326	4662	4177	12/18/15	4/4/17	Contig	Institut de Recherche pour le Developpement	SAMN03175440	GCA_001469465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/465/GCA_001469465.1_XV_LMG920_E1.0	-	LMG 920
Aeromonas caviae	648	PRJEB7024	267796	Proteobacteria	Gammaproteobacteria	4.4714	61.7	-	CDBK01	111	4157	3948	11/24/14	4/3/17	Scaffold	UCONNMISEQ	SAMEA2752423	GCA_000819785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/785/GCA_000819785.1_PRJEB7024	-	CECT 838
Streptobacillus moniliformis	34105	PRJNA319313	319313	Fusobacteria	Fusobacteriia	1.70052	26	-	LWQX01	218	1589	1460	6/3/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04884974	GCA_001655825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/825/GCA_001655825.1_ASM165582v1	-	NCTC 11194
Klebsiella aerogenes FGI35	685445	PRJNA195754	195754	Proteobacteria	Gammaproteobacteria	5.14328	55.1	-	ARTC01	1	5028	4787	4/26/13	4/6/17	Scaffold	DOE Joint Genome Institute	SAMN02440965	GCA_000383335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/335/GCA_000383335.1_ASM38333v1	-	FGI35
Leuconostoc pseudomesenteroides	33968	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.98982	39	-	MPHP01	171	2077	1860	3/27/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981485	GCA_002072565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/565/GCA_002072565.1_ASM207256v1	28217118	LMGH95
Staphylococcus pseudintermedius	283734	PRJNA264198	264198	Terrabacteria group	Firmicutes	2.56006	37.5	-	JTKQ01	39	2435	2324	4/18/16	4/5/17	Contig	"Department of Technology, Metropolitan University College (Copenhagen, Denmark)"	SAMN03120293	GCA_001622965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/965/GCA_001622965.1_ASM162296v1	27199912	9841787-1
Xanthomonas gardneri	90270	PRJNA276595	276595	Proteobacteria	Gammaproteobacteria	5.3396	63.5	-	JZJY01	158	4701	4327	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03378958	GCA_001009325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/325/GCA_001009325.1_ASM100932v1	26089818	SM605-11
Bacillus amyloliquefaciens LL3	1001582	PRJNA64659	64659	Terrabacteria group	Firmicutes	4.00199	45.6938	chromosome:NC_017190.1/CP002634.1; plasmid pMC1:NC_017189.1/CP002635.1	-	2	4130	3941	4/14/11	3/30/17	Complete Genome	"Department of Microbiology, College of Life Sciences, Nankai University,Tianjin 300071, China"	SAMN02603189	GCA_000204275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/275/GCA_000204275.1_ASM20427v1	21551302	LL3
Microbacterium testaceum StLB037	979556	PRJEB16292	348895	Terrabacteria group	Actinobacteria	3.4718	69.9	-	FNJN01	12	3269	3178	10/20/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487788	GCA_900104345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/345/GCA_900104345.1_IMG-taxon_2623620614_annotated_assembly	-	StLB037
Chlamydia pecorum MC/MarsBar	1427369	PRJNA229198	229198	PVC group	Chlamydiae	1.1053	41.1503	chromosome:NZ_CM002310.1/CM002310.1	AZBC01	1	2001	1893	12/12/13	4/2/17	Chromosome	Queensland University of Technology	SAMN02470823	GCA_000508045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/045/GCA_000508045.1_CpecMC_MarsBar1.0	25106440	MC/MarsBar
Aeromonas veronii AMC35	1073385	PRJNA71519	71519	Proteobacteria	Gammaproteobacteria	4.56561	58.5	-	AGWW01	2	4154	3978	9/17/12	5/18/17	Scaffold	Broad Institute	SAMN02463951	GCA_000298035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/035/GCA_000298035.1_Aero_vero_AMC35_V1	-	AMC35
Burkholderia gladioli 3848s-5	1263856	PRJNA178519	178519	Proteobacteria	Betaproteobacteria	7.86669	67.9	-	AQOL01	1147	7219	6366	4/15/13	5/18/17	Contig	Colorado State University	SAMN02469644	GCA_000365265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/265/GCA_000365265.1_B._gladioli_3848s	24261408	3848s-5
Mycobacterium abscessus subsp. bolletii	319705	PRJNA354248	354248	Terrabacteria group	Actinobacteria	5.0617	64.1	-	MVHK01	31	5025	4866	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064233	GCA_002086525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/525/GCA_002086525.1_ASM208652v1	-	CIP108541
Leptospira weilii serovar Ranarum str. ICFT	1218598	PRJNA177134	177134	Spirochaetes	Spirochaetia	4.02672	42.7	-	AOHC02	59	3861	3605	1/18/13	4/1/17	Contig	J. Craig Venter Institute	SAMN02436408	GCA_000332415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/415/GCA_000332415.2_gls454060v02	-	ICFT
Leptospira noguchii str. Bonito	1218586	PRJNA177135	177135	Spirochaetes	Spirochaetia	4.49898	35.7	-	AOHH01	309	4099	3608	3/14/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01801600	GCA_000346655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/655/GCA_000346655.1_gls454072v02	-	Bonito
Pseudomonas brassicacearum PP1_210F	1403314	PRJNA219725	219725	Proteobacteria	Gammaproteobacteria	6.77162	60.8	-	AYJR01	5	6159	5810	11/18/14	4/2/17	Scaffold	CNRS - UPR2355	SAMN03196957	GCA_000785375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/375/GCA_000785375.1_PseuBrassicaPP1_210F_1.0	25635020	PP1_210F
Photobacterium leiognathi subsp. mandapamensis	48408	PRJNA302718	302718	Proteobacteria	Gammaproteobacteria	4.5884	41.1	-	LNRA01	95	4122	3949	2/10/16	4/4/17	Contig	University of Cambridge	SAMN04279317	GCA_001558075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/075/GCA_001558075.1_ASM155807v1	-	CUB3
Gallibacterium anatis CCM5995	1396513	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.25853	40	-	JPXT01	57	2141	2030	11/4/14	4/2/17	Contig	University of Copenhagen	SAMN02344107	GCA_000771805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/805/GCA_000771805.1_ASM77180v1	-	CCM5995
Haemophilus haemolyticus	726	PRJNA282678	282678	Proteobacteria	Gammaproteobacteria	1.83639	38.4	-	LCTJ01	73	1811	1677	5/15/15	4/3/17	Contig	University of Iowa	SAMN03573809	GCA_001008225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/225/GCA_001008225.1_ASM100822v1	-	3P5
Melissococcus plutonius	33970	PRJNA263541	263541	Terrabacteria group	Firmicutes	2.06686	31.1	-	JSAZ01	15	1834	1625	7/7/15	4/3/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03103708	GCA_001047445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/445/GCA_001047445.1_ASM104744v1	-	90
Lactobacillus kefiranofaciens subsp. kefirgranum DSM 10550 = JCM 8572	1423828	PRJDB772	243684	Terrabacteria group	Firmicutes	2.06557	37.4	-	BBAQ01	104	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000473	GCA_001311335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/335/GCA_001311335.1_ASM131133v1	-	JCM 8572
Mycobacterium colombiense	339268	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.80785	67.4	-	LZKW01	487	5668	5127	6/17/16	4/5/17	Contig	JCVI	SAMN04634156	GCA_001673005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/005/GCA_001673005.1_ASM167300v1	-	1211504.4
Brevibacillus laterosporus PE36	1399144	PRJNA218523	218523	Terrabacteria group	Firmicutes	5.13337	41.1	-	AXBT01	62	4627	4356	9/30/13	4/11/17	Scaffold	University of Oklahoma	SAMN02351358	GCA_000472325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/325/GCA_000472325.2_PE_F_paired_	24595070	PE36
Mycobacterium africanum MAL010070	1354161	PRJNA211630	211630	Terrabacteria group	Actinobacteria	4.38478	65.6	-	JLAZ01	5	4244	4030	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02231099	GCA_000666185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/185/GCA_000666185.1_Myco_afri_MAL010070_V1	-	MAL010070
Pantoea agglomerans	549	PRJNA386857	386857	Proteobacteria	Gammaproteobacteria	4.79487	55.1	-	NHAS01	34	4527	4346	7/20/17	7/22/17	Scaffold	Institute of Biotechnology CAS	SAMN07136241	GCA_002222515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/222/515/GCA_002222515.1_ASM222251v1	-	JM1
Mycobacterium canettii CIPT 140070005	1246120	PRJEB585	184396	Terrabacteria group	Actinobacteria	4.29797	65.4	-	CAOM01	516	4282	3898	12/19/12	5/19/17	Contig	Institut Pasteur	SAMEA2272108	GCA_000343895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/895/GCA_000343895.1_ASM34389v1	23291586	CIPT 140070005
Vibrio nigripulchritudo	28173	PRJNA242743	242743	Proteobacteria	Gammaproteobacteria	6.21533	45.8	-	JXXT01	74	5651	5520	4/1/15	4/3/17	Contig	Technical University of Denmark	SAMN03323923	GCA_000967475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/475/GCA_000967475.1_S2604	25879706	S2604
Vibrio cholerae	666	PRJNA245932	245932	Proteobacteria	Gammaproteobacteria	5.00049	45.6893	chromosome 1:CP007653.1; chromosome 2:CP007654.1; chromosome 3:CP007655.1	-	3	4787	4579	7/2/15	7/2/15	Complete Genome	Osaka University	SAMN02741812	GCA_001045415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/415/GCA_001045415.1_ASM104541v1	-	TSY216
Enterococcus hirae ATCC 9790	768486	PRJNA191902	191902	Terrabacteria group	Firmicutes	2.88266	36.8	-	ASVZ01	6	2757	2607	5/31/13	4/1/17	Contig	Broad Institute	SAMN02596951	GCA_000407425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/425/GCA_000407425.1_Ente_hira_ATCC8043_V2	-	ATCC 9790
Hafnia alvei	569	PRJNA236111	236111	Proteobacteria	Gammaproteobacteria	4.80457	48.7	-	JTEU02	53	4526	4329	1/5/15	4/3/17	Contig	University of Malaya	SAMN03178217	GCA_000818805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/805/GCA_000818805.2_ASM81880v2	-	DSM 30099
Selenomonas ruminantium	971	PRJEB16657	349906	Terrabacteria group	Firmicutes	3.039	49.5	-	FNQG01	22	2889	2774	10/22/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660648	GCA_900107615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/615/GCA_900107615.1_IMG-taxon_2593339219_annotated_assembly	-	DSM 2872
Lactobacillus curvatus JCM 1096 = DSM 20019	1293592	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.81583	42	-	AZDL01	250	1850	1690	11/6/15	4/4/17	Scaffold	Shanghai Majorbio	SAMN02369367	GCA_001435495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/495/GCA_001435495.1_ASM143549v1	26415554	DSM 20019
Staphylococcus sciuri	1296	PRJNA278416	278416	Terrabacteria group	Firmicutes	2.91825	32.6	-	LDTK01	127	2980	2849	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401356	GCA_001476955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/955/GCA_001476955.1_ASM147695v1	26793183	NS1
Agrobacterium rhizogenes	359	PRJNA247545	247545	Proteobacteria	Alphaproteobacteria	6.66713	60.1	-	JUHF01	16	6299	6155	12/9/14	4/2/17	Contig	DOE Joint Genome Institute	SAMN02787163	GCA_000799685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/685/GCA_000799685.1_ASM79968v1	-	CF263
Pediococcus damnosus	51663	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.19173	38.2	-	JQBD01	201	2118	2003	11/6/15	4/4/17	Contig	Shanghai Majorbio	SAMN02797815	GCA_001437255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/255/GCA_001437255.1_ASM143725v1	26415554	DSM 20331
Acidithiobacillus thiooxidans	930	PRJNA319309	319309	Proteobacteria	Acidithiobacillia	3.81297	53.1	-	LWRZ01	449	4196	3683	8/16/16	4/5/17	Contig	Central South University	SAMN04884743	GCA_001705725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/725/GCA_001705725.1_ASM170572v1	27548157	BY-02
Morganella morganii IS15	1411647	PRJEB4780	232024	Proteobacteria	Gammaproteobacteria	4.17631	50.9	-	CBWE01	84	4143	3825	1/2/14	4/2/17	Contig	AIT	SAMEA3138874	GCA_000530115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/115/GCA_000530115.1_IS15v1	-	IS15
Streptococcus sobrinus TCI-50	1074056	PRJNA71881	71881	Terrabacteria group	Firmicutes	2.07714	43.5	-	AGGF01	366	2116	1850	10/6/11	3/30/17	Contig	JCVI	SAMN02436532	GCA_000227865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/865/GCA_000227865.2_SMUT1-NEX_5-50	-	TCI-50
Cutibacterium avidum	33010	PRJNA298214	298214	Terrabacteria group	Actinobacteria	2.46397	63.4	-	LLJH01	15	2284	2131	11/4/16	4/5/17	Contig	Aarhus University	SAMN04156671	GCA_001866575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/575/GCA_001866575.1_ASM186657v1	27355425	T13
Geobacillus sp. ZGt-1	1631556	PRJNA278519	278519	Terrabacteria group	Firmicutes	3.48311	52.1	-	LDPD01	241	3407	2977	6/5/15	4/10/17	Scaffold	Lund Univesrity	SAMN03420899	GCA_001026865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/865/GCA_001026865.1_ASM102686v1	26205859	ZGt-1
Prevotella intermedia ATCC 25611 = DSM 20706	1122984	PRJNA169798	169798	FCB group	Bacteroidetes/Chlorobi group	2.57325	43.3	-	JAEZ01	22	2286	2142	1/10/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02584920	GCA_000519165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/165/GCA_000519165.1_ASM51916v1	-	ATCC 25611
Tannerella forsythia	28112	PRJEB15383	345086	FCB group	Bacteroidetes/Chlorobi group	3.23303	47.2	-	FMMN01	71	2657	2516	10/1/16	6/12/17	Scaffold	UNIVERSITY OF SHEFFIELD	SAMEA4441422	GCA_900096725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/096/725/GCA_900096725.1_TFUB4	-	UB4
Actinomyces naeslundii	1655	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.18349	67.6	-	MSLB01	44	2691	2540	1/5/17	4/6/17	Scaffold	King's College London	SAMN05898712	GCA_001937615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/615/GCA_001937615.1_ASM193761v1	-	R8152
Clostridium pasteurianum DSM 525 = ATCC 6013	1262449	PRJNA182067	182067	Terrabacteria group	Firmicutes	4.28569	29.8	-	ANZB01	37	4011	3824	1/3/13	6/15/17	Contig	Institute of Bioprocess and Biosystems Engineering	SAMN02469956	GCA_000330945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/945/GCA_000330945.1_Cpasteurianum_V1	23469350	DSM 525
Azospirillum brasilense	192	PRJNA248255	248255	Proteobacteria	Alphaproteobacteria	7.09252	68.4	-	JPIS01	595	6381	6145	3/14/17	3/16/17	Contig	Hebrew University of Jerusalem	SAMN02796067	GCA_002027445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/445/GCA_002027445.1_ASM202744v1	-	V6
Mycobacterium chelonae	1774	PRJNA347845	347845	Terrabacteria group	Actinobacteria	5.1012	64.1	-	MLHY01	20	4987	4858	10/26/16	4/5/17	Contig	University of Georgia	SAMN05897980	GCA_001853615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/615/GCA_001853615.1_ASM185361v1	-	35600
Vibrio campbellii	680	PRJNA306799	306799	Proteobacteria	Gammaproteobacteria	5.63411	45.4872	chromosome I:NZ_CP019634.1/CP019634.1; chromosome II:NZ_CP019635.1/CP019635.1	-	2	5186	4974	2/10/17	4/10/17	Chromosome	Academia Sinica	SAMN04364235	GCA_001991055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/055/GCA_001991055.1_ASM199105v1	-	1114GL
Staphylococcus xylosus	1288	PRJNA278269	278269	Terrabacteria group	Firmicutes	2.84207	32.7	-	LDTU01	111	2675	2584	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401363	GCA_001476985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/985/GCA_001476985.1_ASM147698v1	26793183	NS341
Pseudomonas pseudoalcaligenes KF707 = NBRC 110670	1149133	PRJNA83639	83639	Proteobacteria	Gammaproteobacteria	6.67805	65.4	-	AJMR01	229	6234	5977	5/8/12	5/19/17	Scaffold	"Dipartimento di Bioscienze, Biotecnologie e Scienze Farmacologiche"	SAMN02471394	GCA_000262065.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/065/GCA_000262065.3_KF707_a1	22843571	KF707
Vibrio coralliilyticus	190893	PRJNA380034	380034	Proteobacteria	Gammaproteobacteria	5.84268	45.6306	chromosome I:NZ_CP020453.1/CP020453.1; chromosome II:NZ_CP020454.1/CP020454.1; plasmid pSNUTY1:NZ_CP020455.1/CP020455.1; plasmid pSNUTY2:NZ_CP020456.1/CP020456.1	-	4	5525	4316	3/29/17	4/11/17	Complete Genome	Korea Research Institute of Bioscience & Biotechnology	SAMN06626869	GCA_002073995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/995/GCA_002073995.1_ASM207399v1	-	SNUTY-1
Anaerostipes hadrus	649756	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.159	36.8	-	CYXY01	37	3083	2911	10/1/15	4/4/17	Contig	SC	SAMEA3545422	GCA_001405635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/635/GCA_001405635.1_14207_7_82	-	2789STDY5834959
Flavonifractor plautii	292800	PRJNA289613	289613	Terrabacteria group	Firmicutes	3.81365	60.9	-	NHMQ01	5	3729	3584	7/19/17	7/21/17	Contig	Max von Pettenkofer-Institut	SAMN03856234	GCA_002221645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/645/GCA_002221645.1_ASM222164v1	-	YL31
Bacillus simplex	1478	PRJNA375758	375758	Terrabacteria group	Firmicutes	5.85246	40.1	-	NCWW01	215	5708	5372	8/29/17	8/30/17	Contig	SysMilk	SAMN06718486	GCA_002276655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/655/GCA_002276655.1_ASM227665v1	-	OG2
Pseudomonas viridiflava	33069	PRJNA270634	270634	Proteobacteria	Gammaproteobacteria	5.99249	59.3	-	JXQO01	73	5450	5226	2/9/15	4/3/17	Contig	University of Chicago	SAMN03267840	GCA_000834695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/695/GCA_000834695.1_ASM83469v1	-	LMCA8
Moraxella bovoculi 237	743974	PRJNA46467	46467	Proteobacteria	Gammaproteobacteria	2.05191	45.6	-	AOMT01	45	1952	1829	5/23/14	4/2/17	Contig	University of Missouri	SAMN02786836	GCA_000696305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/305/GCA_000696305.1_MBO_237	24970830	237
Sulfobacillus thermosulfidooxidans	28034	PRJNA339397	339397	Terrabacteria group	Firmicutes	3.1808	48.5	-	MDZF01	20	3083	2981	1/17/17	5/8/17	Contig	Central South University	SAMN05590356	GCA_001953295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/295/GCA_001953295.1_ASM195329v1	-	ZJ
Acinetobacter ursingii	108980	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.16563	40.2	-	BBUC01	27	2961	2853	2/20/15	4/3/17	Contig	National Institute of Technology and Evaluation	SAMD00020357	GCA_000949835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/835/GCA_000949835.1_ASM94983v1	-	NBRC 110605
Raoultella planticola	575	PRJNA311932	311932	Proteobacteria	Gammaproteobacteria	6.01105	55.5	-	LSUV01	81	5919	5632	6/15/16	4/5/17	Scaffold	National Institute of Health Dr Ricardo Jorge	SAMN04497993	GCA_001663315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/315/GCA_001663315.1_ASM166331v1	-	INSali127
Neorhizobium galegae bv. officinalis	323656	PRJEB6976	282473	Proteobacteria	Alphaproteobacteria	6.00037	61.6	-	CCRK01	60	5818	5615	4/29/15	4/3/17	Contig	UH	SAMEA2698476	GCA_000985975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/975/GCA_000985975.1_NgalHAMBI1189Draft	-	-
Enterococcus durans NBRC 100479	1218088	PRJDB261	172084	Terrabacteria group	Firmicutes	3.0173	37.8	-	BCQB01	122	2985	2767	1/28/16	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00045728	GCA_001544215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/215/GCA_001544215.1_ASM154421v1	-	NBRC 100479
Campylobacter lanienae	75658	PRJNA341012	341012	Proteobacteria	delta/epsilon subdivisions	1.69355	34.3	-	MJJW01	99	1756	1654	5/15/17	9/19/17	Contig	USDA	SAMN05687032	GCA_002139415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/415/GCA_002139415.1_ASM213941v1	28854596	RM8001
Arcobacter cryaerophilus	28198	PRJNA302819	302819	Proteobacteria	delta/epsilon subdivisions	1.85048	28	-	LNTC01	456	2113	1503	4/5/17	4/8/17	Scaffold	Portland State University	SAMN04280758	GCA_002080085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/085/GCA_002080085.1_ASM208008v1	-	AZT-1
Rhodococcus pyridinivorans	103816	PRJNA306614	306614	Terrabacteria group	Actinobacteria	5.18148	67.9	-	LRRI01	154	4845	4504	5/18/16	4/5/17	Scaffold	Northumbria University	SAMN04357314	GCA_001646805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/646/805/GCA_001646805.1_ASM164680v1	-	DSM 44555
Flavobacterium columnare	996	PRJNA360885	360885	FCB group	Bacteroidetes/Chlorobi group	3.33945	30.6	-	MTCZ01	376	3004	2751	6/22/17	6/24/17	Contig	"Faculty of Veterinary Science, Chulalongkorn University"	SAMN06216377	GCA_002204815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/815/GCA_002204815.1_ASM220481v1	28624550	1215
Leptospirillum ferriphilum	178606	PRJNA348753	348753	Nitrospirae	Nitrospira	2.04108	55.4	-	DGKL01	63	-	-	9/28/17	9/28/17	Contig	University of Queensland	SAMN06450523	GCA_002386985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/985/GCA_002386985.1_ASM238698v1	28894102	-
Rhodococcus fascians 02-815	1443888	PRJNA233522	233522	Terrabacteria group	Actinobacteria	6.23884	64.4	-	JMFF01	30	5817	5674	9/30/14	4/2/17	Scaffold	Oregon State University	SAMN02569985	GCA_000760835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/835/GCA_000760835.1_R_fas_02-815	-	02-815
Enterococcus mundtii	53346	PRJNA311247	311247	Terrabacteria group	Firmicutes	2.9573	38.5	-	LSMC01	159	2686	2597	6/23/16	4/5/17	Contig	Quaid-i-Azam University Islamabad	SAMN04481064	GCA_001675535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/535/GCA_001675535.1_ASM167553v1	-	QAUEM2808
Carnobacterium maltaromaticum	2751	PRJEB9002	381173	Terrabacteria group	Firmicutes	3.30886	34.4	-	CVNA01	229	3134	2745	3/31/17	5/31/17	Contig	UNIV-LORRAINE	SAMEA3339669	GCA_900005095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/005/095/GCA_900005095.1_ASM90000509v1	-	ML_1_97
Bacillus licheniformis	1402	PRJNA386753	386753	Terrabacteria group	Firmicutes	4.82446	45.6236	chromosome:NZ_CP021669.1/CP021669.1; plasmid pBL141-1:NZ_CP021671.1/CP021671.1; plasmid pBL141-2:NZ_CP021670.1/CP021670.1	-	3	5061	4692	6/6/17	6/8/17	Complete Genome	Microbial Institiue for Fermentation Industry	SAMN07125935	GCA_002173675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/675/GCA_002173675.1_ASM217367v1	-	SRCM100141
Paenibacillus peoriae	59893	PRJNA343020	343020	Terrabacteria group	Firmicutes	6.11331	45.5	-	MRTV01	58	5349	5130	1/18/17	4/6/17	Contig	Cornell University	SAMN05929628	GCA_001956235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/235/GCA_001956235.1_ASM195623v1	-	FSL R7-0321
Paenibacillus polymyxa	1406	PRJNA277390	277390	Terrabacteria group	Firmicutes	6.0918	45.6	chromosome:NZ_CP011420.1/CP011420.1	-	1	5418	5045	12/27/16	4/6/17	Complete Genome	Universiti Sains Malaysia	SAMN03390044	GCA_001922145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/145/GCA_001922145.1_ASM192214v1	-	ATCC 15970
Xanthomonas vasicola	56459	PRJNA264730	264730	Proteobacteria	Gammaproteobacteria	4.92216	63.2	-	JSBU01	72	4561	3913	11/6/14	4/11/17	Scaffold	University of Exeter	SAMN03140122	GCA_000772715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/715/GCA_000772715.1_NCPPB1060v1	-	NCPPB 1060
Leptospira kirschneri serovar Valbuzzi str. 200702274	1049968	PRJNA74141	74141	Spirochaetes	Spirochaetia	4.31743	35.9	-	AHOC02	22	3899	3574	1/24/12	5/18/17	Contig	J. Craig Venter Institute	SAMN02436380	GCA_000244515.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/515/GCA_000244515.3_Lkirs200702274v2.0	-	200702274
Salinispora pacifica CNT124	1169188	PRJNA175156	175156	Terrabacteria group	Actinobacteria	5.16413	69.8	-	ARGM01	47	4805	4460	4/19/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441686	GCA_000374785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/785/GCA_000374785.1_ASM37478v1	-	CNT124
Xanthomonas arboricola 3004	1432057	PRJNA230405	230405	Proteobacteria	Gammaproteobacteria	4.7659	66	-	AZQY01	132	4171	3829	3/4/14	4/2/17	Contig	"1Centre ""Bioengineering"" of Russian Academy of Sciences"	SAMN02952962	GCA_000585435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/435/GCA_000585435.1_404	25700410	3004
Pseudomonas psychrotolerans	237610	PRJNA278261	278261	Proteobacteria	Gammaproteobacteria	5.28378	64.9	-	LDTA01	121	4810	4665	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401426	GCA_001476475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/475/GCA_001476475.1_ASM147647v1	26793183	SB9
Rhodococcus rhodochrous KG-21	1441923	PRJNA232791	232791	Terrabacteria group	Actinobacteria	6.09995	69.6	-	AZYO01	232	5633	5215	9/3/15	4/4/17	Contig	Centre for Cellular and Molecular Biology (CSIR-CCMB)	SAMN02527332	GCA_001278665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/665/GCA_001278665.1_ASM127866v1	26472842	KG-21
Janthinobacterium lividum	29581	PRJEB17892	353798	Proteobacteria	Betaproteobacteria	6.30055	62.5	-	FPKH01	20	5592	5451	11/17/16	4/6/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03097694	GCA_900119665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/665/GCA_900119665.1_IMG-taxon_2600255292_annotated_assembly	-	NFR18
Wolbachia pipientis	955	PRJNA357180	357180	Proteobacteria	Alphaproteobacteria	1.15881	34	-	MRWX01	95	1123	1040	9/20/17	9/22/17	Contig	University of Adelaide	SAMN06134623	GCA_002318985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/985/GCA_002318985.1_ASM231898v1	-	wAus
Paenibacillus polymyxa	1406	PRJNA352448	352448	Terrabacteria group	Firmicutes	6.12612	45.6	chromosome:NZ_CP017968.2/CP017968.2	-	1	5432	5040	11/10/16	4/5/17	Complete Genome	Shandong Agricultural University	SAMN05981093	GCA_001874425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/425/GCA_001874425.2_ASM187442v2	-	YC0573
Streptomyces acidiscabies	42234	PRJDB4008	287593	Terrabacteria group	Actinobacteria	10.5824	70.6	-	BCML01	259	9442	8851	12/23/16	3/15/17	Contig	"Plant Pathology and Entomology, Kagoshima Institute for Agricultural Development"	SAMD00034893	GCA_001949645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/645/GCA_001949645.1_ASM194964v1	-	a2
Mycoplasma canis UFG4	1131455	PRJNA80801	80801	Terrabacteria group	Tenericutes	0.867444	27	-	AJFU01	6	681	620	4/17/12	3/30/17	Contig	University of Florida	SAMN02471774	GCA_000259005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/005/GCA_000259005.1_ASM25900v1	22815452	UFG4
Pseudomonas monteilii NBRC 103158 = DSM 14164	1215110	PRJDB218	171637	Proteobacteria	Gammaproteobacteria	6.29999	61.5	-	BBIS01	132	6005	5734	7/10/14	4/2/17	Contig	National Institute of Technology and Evaluation	SAMD00018426	GCA_000730605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/605/GCA_000730605.1_ASM73060v1	-	NBRC 103158
Moraxella bovoculi	386891	PRJNA282717	282717	Proteobacteria	Gammaproteobacteria	2.12034	45.6	chromosome:NZ_CP011381.1/CP011381.1	-	1	1984	1859	5/6/15	4/3/17	Complete Genome	USDA	SAMN03577770	GCA_000988745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/745/GCA_000988745.1_ASM98874v1	-	58086
Pseudoalteromonas luteoviolacea S2607	1365255	PRJNA213497	213497	Proteobacteria	Gammaproteobacteria	5.9436	42.2	-	AUXV01	73	4979	4820	4/22/16	4/5/17	Contig	Technical University of Denmark	SAMN02250939	GCA_001625575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/625/575/GCA_001625575.1_S2607_1.0	-	S2607
Cronobacter malonaticus	413503	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.61243	56.6	-	MSAD01	91	4507	4262	12/28/16	4/6/17	Contig	FDA/CFSAN	SAMN04329653	GCA_001922825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/825/GCA_001922825.1_ASM192282v1	-	MOD1-Md27g
Lactobacillus mucosae	97478	PRJEB16859	351032	Terrabacteria group	Firmicutes	1.88342	46.7	-	FNZY01	32	1834	1694	10/29/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216545	GCA_900109445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/445/GCA_900109445.1_IMG-taxon_2654588116_annotated_assembly	-	KHPC15
Megasphaera elsdenii	907	PRJEB18340	355736	Terrabacteria group	Firmicutes	2.45179	53.1	-	FRAK01	33	2378	2232	12/2/16	4/6/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488492	GCA_900142305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/305/GCA_900142305.1_IMG-taxon_2627853554_annotated_assembly	-	J1
Pseudomonas fragi NBRC 3458	1215101	PRJDB209	171628	Proteobacteria	Gammaproteobacteria	5.02818	59.4	-	BDAB01	48	4628	4484	4/4/17	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046927	GCA_002091615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/615/GCA_002091615.1_ASM209161v1	-	NBRC 3458
Vibrio cyclitrophicus	47951	PRJNA322709	322709	Proteobacteria	Gammaproteobacteria	5.01287	43.6	-	LZFZ01	63	4455	4244	6/23/16	4/5/17	Contig	UC Davis	SAMN05172619	GCA_001675965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/965/GCA_001675965.1_ASM167596v1	-	UCD-FRSP16_8
Enterococcus cecorum	44008	PRJNA284225	284225	Terrabacteria group	Firmicutes	2.27538	36.3	-	LDDZ01	28	2281	2111	6/8/15	4/3/17	Contig	Warsaw University of Life Sciences (SGGW)	SAMN03699897	GCA_001021675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/675/GCA_001021675.1_ASM102167v1	26383654	D-104
Staphylococcus intermedius	1285	PRJEB20760	385934	Terrabacteria group	Firmicutes	2.67781	37.4	-	FXUZ01	136	2486	2363	5/11/17	5/24/17	Contig	WTSI	SAMEA104055222	GCA_900183575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/575/GCA_900183575.1_SAMEA104055222	-	NW1
Pseudomonas chlororaphis	587753	PRJEB16371	349325	Proteobacteria	Gammaproteobacteria	7.04762	62.7	chromosome I:NZ_LT629738.1/LT629738.1	-	1	6434	6243	10/21/16	4/5/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489803	GCA_900104715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/715/GCA_900104715.1_IMG-taxon_2636416064_annotated_assembly	-	ATCC 13985
Acinetobacter bereziniae	106648	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.80093	37.8	-	JVEK01	278	4541	4347	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197700	GCA_001055215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/215/GCA_001055215.1_ASM105521v1	26230489	507_ABAU
Pseudomonas fuscovaginae	50340	PRJNA263429	263429	Proteobacteria	Gammaproteobacteria	7.14078	63.3	-	JSYZ01	79	6429	6233	9/18/15	4/4/17	Scaffold	IRRI	SAMN03100370	GCA_001293465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/465/GCA_001293465.1_ASM129346v1	26422147	IRRI 6609
Serratia plymuthica RVH1	1006598	PRJNA175925	175925	Proteobacteria	Gammaproteobacteria	5.51432	56.2	chromosome:NZ_ARWD01000001.1/ARWD01000001.1	ARWD01	1	5204	5009	4/26/13	4/2/17	Chromosome	DOE Joint Genome Institute	SAMN02440958	GCA_000478545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/545/GCA_000478545.1_ASM47854v1	24503985	RVH1
Paenibacillus polymyxa SQR-21	1413214	PRJNA224951	224951	Terrabacteria group	Firmicutes	5.82844	45.6	chromosome:NZ_CP006872.1/CP006872.1	-	1	5095	4800	3/19/14	4/2/17	Complete Genome	Nanjing Agricultrual University	SAMN02384808	GCA_000597985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/985/GCA_000597985.1_ASM59798v1	24723719	SQR21
Pseudomonas avellanae	46257	PRJNA392840	392840	Proteobacteria	Gammaproteobacteria	6.99918	57.2	-	NKQU01	687	6906	5245	8/21/17	8/21/17	Scaffold	National Agriculture and Food Research Organization (NARO)	SAMN07311424	GCA_002261495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/495/GCA_002261495.1_ASM226149v1	26891997	MAFF 212061
Alcaligenes faecalis subsp. faecalis NCIB 8687	1156918	PRJNA86069	86069	Proteobacteria	Betaproteobacteria	3.89962	57.2	-	AKMR01	186	3583	3437	6/28/12	3/30/17	Contig	Universityof Illinois at Chicago	SAMN00998594	GCA_000275465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/465/GCA_000275465.1_Gretchen3	22933773	NCIB 8687
Bradyrhizobium elkanii CCBAU 05737	1128203	PRJNA77219	77219	Proteobacteria	Alphaproteobacteria	9.77318	63.5	-	AJPV01	751	9578	8527	5/3/12	5/18/17	Contig	China Agricultural University	SAMN02469485	GCA_000261505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/505/GCA_000261505.1_05737	22586130	CCBAU 05737
Staphylococcus equorum	246432	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.84707	33	-	LNMZ01	90	2747	2668	9/28/16	4/5/17	Contig	Tufts University	SAMN04244253	GCA_001747885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/885/GCA_001747885.1_ASM174788v1	-	White_SAM
Paenibacillus polymyxa CR1	1429244	PRJNA230571	230571	Terrabacteria group	Firmicutes	6.01988	45.6	chromosome:NC_023037.2/CP006941.2	-	1	5403	5076	12/13/13	4/2/17	Complete Genome	Agriculture and Agri-Food Canada	SAMN02641480	GCA_000507205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/507/205/GCA_000507205.2_ASM50720v2	24459277	CR1
Treponema caldarium DSM 7334	744872	PRJNA46527	46527	Spirochaetes	Spirochaetia	3.23934	45.6	chromosome:NC_015732.1/CP002868.1	-	1	2923	2828	6/30/11	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02232064	GCA_000219725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/725/GCA_000219725.1_ASM21972v1	-	DSM 7334
Paeniclostridium sordellii	1505	PRJEB8123	277648	Terrabacteria group	Firmicutes	3.51402	27.3	-	CEKW01	31	3442	3305	3/13/15	4/4/17	Contig	WTSI	SAMEA1572075	GCA_001372355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/355/GCA_001372355.1_R31809	-	R31809
Bordetella holmesii 35009	1247645	PRJNA178405	178405	Proteobacteria	Betaproteobacteria	3.73436	62.7	-	JDSK01	6	3701	2970	2/14/14	4/2/17	Contig	Institute for Genome Sciences	SAMN02190086	GCA_000571975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/975/GCA_000571975.1_gbhBH002	-	35009
Oribacterium sp. C9	1943579	PRJNA362832	362832	Terrabacteria group	Firmicutes	3.72002	42.8	-	MUHW01	84	3232	3124	2/27/17	3/2/17	Contig	CSIRO	SAMN06249574	GCA_002007235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/235/GCA_002007235.1_ASM200723v1	-	C9
Acinetobacter sp. SH024	575565	PRJNA41947	41947	Proteobacteria	Gammaproteobacteria	3.97084	38.8	-	ADCH01	26	3861	3643	3/22/10	3/30/17	Scaffold	Broad Institute	SAMN02463817	GCA_000163635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/635/GCA_000163635.1_ASM16363v1	23144699	SH024
Bacillus safensis	561879	PRJNA246604	246604	Terrabacteria group	Firmicutes	3.77132	41.5	-	JNBO01	65	3805	3713	6/27/14	4/2/17	Contig	UNICAMP	SAMN02786784	GCA_000715185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/185/GCA_000715185.1_ASM71518v1	25059859	CFA06
Klebsiella sp. KTE92	1182695	PRJNA164933	164933	Proteobacteria	Gammaproteobacteria	5.47134	57.3	-	ASQN01	3	5383	5153	5/16/13	2/20/17	Scaffold	Broad Institute	SAMN00854647	GCA_000398905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/905/GCA_000398905.1_Esch_coli_KTE92_V1	-	KTE92
Flavobacterium sp. Root935	1736610	PRJNA297942	297942	FCB group	Bacteroidetes/Chlorobi group	5.08796	33.6	-	LMJL01	13	4342	4254	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155879	GCA_001429295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/295/GCA_001429295.1_Root935	26633631	Root935
Frankia sp. AvcI1	573496	PRJNA275998	275998	Terrabacteria group	Actinobacteria	7.7419	72.6	-	LJFZ01	77	6484	6073	10/30/15	8/28/17	Scaffold	University of New Hampshire	SAMN03360499	GCA_001420875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/875/GCA_001420875.1_Avc1	26722013	AvcI1
Polynucleobacter necessarius subsp. necessarius STIR1	452638	PRJNA19991	19991	Proteobacteria	Betaproteobacteria	1.56047	45.6	chromosome:NC_010531.1/CP001010.1	-	1	1699	1328	3/28/08	4/6/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598428	GCA_000019745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/745/GCA_000019745.1_ASM1974v1	-	STIR1
Clostridium sp. M62/1	411486	PRJNA18205	18205	Terrabacteria group	Firmicutes	3.84259	50.1	-	ACFX02	26	3729	3520	3/17/09	4/17/17	Scaffold	Washington University Genome Sequencing Center	SAMN02415619	GCA_000159055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/055/GCA_000159055.1_ASM15905v1	-	M62/1
Lactobacillus brevis	1580	PRJNA386758	386758	Terrabacteria group	Firmicutes	2.55412	45.598	chromosome:NZ_CP021674.1/CP021674.1; plasmid pLB1106-1:NZ_CP021672.1/CP021672.1; plasmid pLB1106-2:NZ_CP021673.1/CP021673.1; plasmid pLB1106-3:NZ_CP021675.1/CP021675.1; plasmid pLB1106-4:NZ_CP021676.1/CP021676.1	-	5	2583	2421	6/6/17	6/8/17	Complete Genome	Microbial Institiue for Fermentation Industry	SAMN07125941	GCA_002174235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/235/GCA_002174235.1_ASM217423v1	-	SRCM101106
Lactobacillus brevis	1580	PRJNA386759	386759	Terrabacteria group	Firmicutes	2.57125	45.5943	chromosome:NZ_CP021479.1/CP021479.1; plasmid pLB1174-1:NZ_CP021478.1/CP021478.1; plasmid pLB1174-2:NZ_CP021480.1/CP021480.1; plasmid pLB1174-3:NZ_CP021481.1/CP021481.1; plasmid pLB1174-4:NZ_CP021482.1/CP021482.1; plasmid pLB1174-5:NZ_CP021483.1/CP021483.1	-	6	2639	2474	6/6/17	6/8/17	Complete Genome	Microbial Institiue for Fermentation Industry	SAMN07125942	GCA_002173555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/555/GCA_002173555.1_ASM217355v1	-	SRCM101174
Ruegeria sp. ZGT118	1685379	PRJNA307148	307148	Proteobacteria	Alphaproteobacteria	4.01203	62.9	-	LQBQ01	39	3855	3728	1/8/16	4/11/17	Contig	"Red Sea Research Center, Saudi Arabia"	SAMN04376034	GCA_001507595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/595/GCA_001507595.1_ASM150759v1	-	ZGT118
Nitrosomonas sp. Nm34	1881055	PRJEB17379	351532	Proteobacteria	Betaproteobacteria	3.80194	44.5	-	FORD01	149	3562	3241	10/31/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428978	GCA_900113925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/925/GCA_900113925.1_IMG-taxon_2675903040_annotated_assembly	-	Nm34
Leptolyngbya sp. Heron Island J	1385935	PRJNA215004	215004	Terrabacteria group	Cyanobacteria/Melainabacteria group	8.06417	48	-	AWNH01	119	7037	6748	10/25/13	4/9/17	Contig	Arizona State University	SAMN02469314	GCA_000482245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/245/GCA_000482245.1_LepHIscaffolds	24503993	Heron Island J
Vibrio coralliilyticus	190893	PRJNA327286	327286	Proteobacteria	Gammaproteobacteria	5.49001	45.5782	chromosome I:NZ_CP016556.1/CP016556.1; chromosome II:NZ_CP016557.1/CP016557.1; plasmid pVs58:NZ_CP016558.1/CP016558.1	-	3	5042	4753	7/26/16	4/5/17	Complete Genome	Korea Research Institute of Bioscience & Biotechnology	SAMN05327862	GCA_001693615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/615/GCA_001693615.1_ASM169361v1	-	58
Lactobacillus brevis KB290	1001583	PRJDA64661	64661	Terrabacteria group	Firmicutes	2.58788	45.5706	chromosome:NC_020819.1/AP012167.1; plasmid pKB290-1:NC_020820.1/AP012168.1; plasmid pKB290-2:NC_020821.1/AP012169.1; plasmid pKB290-3:NC_020826.1/AP012170.1; plasmid pKB290-4:NC_020822.1/AP012171.1; plasmid pKB290-5:NC_020823.1/AP012172.1; plasmid pKB290-6:NC_020827.1/AP012173.1; plasmid pKB290-7:NC_020824.1/AP012174.1; plasmid pKB290-8:NC_020828.1/AP012175.1; plasmid pKB290-9:NC_020825.1/AP012176.1	-	10	2610	2457	3/29/13	4/1/17	Complete Genome	"KAGOME CO., LTD., Research Institute"	SAMD00060986	GCA_000359625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/625/GCA_000359625.1_ASM35962v1	23544154	KB290
Staphylococcus sp. HMSC10B09	1581077	PRJNA269846	269846	Terrabacteria group	Firmicutes	2.1958	31.4	-	LTZW01	87	2147	2052	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03287007	GCA_001807795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/795/GCA_001807795.1_ASM180779v1	-	HMSC10B09
Corynebacterium sp. KPL1995	1203624	PRJNA170364	170364	Terrabacteria group	Actinobacteria	2.31337	55.3	-	AXLQ01	1	2080	1952	10/21/13	4/17/17	Scaffold	Broad Institute	SAMN02596997	GCA_000477935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/935/GCA_000477935.1_Cory_sp_KPL1995_V1	-	KPL1995
Vibrio campbellii	680	PRJNA385748	385748	Proteobacteria	Gammaproteobacteria	6.12437	45.5412	chromosome I:NZ_CP021145.1/CP021145.1; chromosome II:NZ_CP021146.1/CP021146.1; plasmid pLA16-1:NZ_CP021147.1/CP021147.1; plasmid pLA16-2:NZ_CP021148.1/CP021148.1; plasmid pLA16-3:NZ_CP021149.1/CP021149.1; plasmid pLA16-4:NZ_CP021150.1/CP021150.1	-	6	5743	5253	5/16/17	5/24/17	Complete Genome	Korea Research Institute of Bioscience & Biotechnology	SAMN06909310	GCA_002142655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/655/GCA_002142655.1_ASM214265v1	-	LA16-V1
Escherichia sp. KTE52	1182659	PRJNA164861	164861	Proteobacteria	Gammaproteobacteria	4.64793	50.3	-	ASUT01	9	4662	4336	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00854611	GCA_000408325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/325/GCA_000408325.1_Esch_coli_KTE52_V1	-	KTE52
Nostoc sp. KVJ20	457944	PRJNA310825	310825	Terrabacteria group	Cyanobacteria/Melainabacteria group	9.18489	41.7	-	LSSA01	332	7813	7250	8/25/16	4/17/17	Scaffold	NorZymeD	SAMN04453661	GCA_001712795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/795/GCA_001712795.1_ASM171279v1	-	KVJ20
Nocardia sp. NRRL S-836	1519492	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.8694	70.6	-	LGDY01	188	8968	8628	9/4/15	4/11/17	Contig	University of Illinois	SAMN02900644	GCA_001279525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/525/GCA_001279525.1_ASM127952v1	-	NRRL S-836
Shewanella sp. ZOR0012	1339231	PRJNA205575	205575	Proteobacteria	Gammaproteobacteria	4.9532	46	-	JTLE01	94	4467	4173	12/8/14	4/9/17	Scaffold	University of Oregon	SAMN03021526	GCA_000798835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/835/GCA_000798835.1_ZOR0012.1	-	ZOR0012
Bradyrhizobium sp. WSM471	319017	PRJNA61807	61807	Proteobacteria	Alphaproteobacteria	7.78402	63.4	chromosome:NZ_CM001442.1/CM001442.1	AHLW01	1	7336	6996	1/24/12	7/9/17	Chromosome	JGI	SAMN02261395	GCA_000244915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/915/GCA_000244915.1_ASM24491v1	-	WSM471
Streptococcus sp. oral taxon 064	712624	PRJNA282954	282954	Terrabacteria group	Firmicutes	2.01316	41.0991	chromosome:NZ_CP016207.1/CP016207.1; plasmid unnamed1:NZ_CP016208.1/CP016208.1; plasmid unnamed2:NZ_CP016209.1/CP016209.1	-	3	2001	1861	7/11/16	4/17/17	Chromosome	The Forsyth Institute	SAMN03897726	GCA_001683375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/375/GCA_001683375.1_ASM168337v1	-	W10853
Vibrio coralliilyticus	190893	PRJNA256165	256165	Proteobacteria	Gammaproteobacteria	6.03782	45.502	chromosome 1:NZ_CP009617.1/CP009617.1; chromosome 2:NZ_CP009618.1/CP009618.1; plasmid p319:NZ_CP009620.1/CP009620.1; plasmid p380:NZ_CP009619.1/CP009619.1	-	4	5764	5556	11/5/14	4/2/17	Complete Genome	USDA-Agricultural Research Service-Eastern Regional Research Center	SAMN02940923	GCA_000772065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/065/GCA_000772065.1_ASM77206v1	25523764	RE98
Bifidobacterium sp. 71	1960969	PRJNA375084	375084	Terrabacteria group	Actinobacteria	2.15588	62.5	-	MVOH01	34	1772	1627	9/6/17	9/8/17	Contig	University of Parma	SAMN06342339	GCA_002286935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/935/GCA_002286935.1_ASM228693v1	28837128	71
Thermococcus sp. EP1	1591054	PRJNA271626	271626	Euryarchaeota	Thermococci	1.81916	39.3	-	JXCG01	43	1993	1909	10/16/15	4/11/17	Contig	"Third Institute of Oceanography, State Oceanic Administration"	SAMN03274361	GCA_001317345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/345/GCA_001317345.1_ASM131734v1	-	EP1
Serratia sp. S4	768491	PRJNA61833	61833	Proteobacteria	Gammaproteobacteria	5.45474	55	-	APLA01	2	5096	4924	3/21/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02256518	GCA_000347995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/995/GCA_000347995.1_ASM34799v1	-	S4
Nocardiopsis sp. SBT366	1580529	PRJNA280805	280805	Terrabacteria group	Actinobacteria	5.7842	70.7	-	LAVM01	177	5094	4846	7/17/15	4/10/17	Scaffold	University of Wuerzburg	SAMN03470207	GCA_001083815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/815/GCA_001083815.1_ASM108381v1	-	SBT366
Desulfotomaculum gibsoniae DSM 7213	767817	PRJNA59873	59873	Terrabacteria group	Firmicutes	4.85553	45.5	chromosome:NC_021184.1/CP003273.1	-	1	4603	4369	5/6/13	4/17/17	Complete Genome	JGI	SAMN02598540	GCA_000233715.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/715/GCA_000233715.3_ASM23371v3	-	DSM 7213
Polaromonas sp. AET17H-212	1977061	PRJNA381362	381362	Proteobacteria	Betaproteobacteria	4.64686	63.8	-	NBZW01	86	-	-	9/27/17	9/27/17	Contig	UNIVERSITY OF SASKATCHEWAN	SAMN06675006	GCA_002379085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/085/GCA_002379085.1_ASM237908v1	-	AET17H-212
Sulfurovum sp. AS07-7	1539062	PRJNA259227	259227	Proteobacteria	delta/epsilon subdivisions	2.74444	33.9	-	JQIP01	79	2591	2481	1/29/15	1/29/15	Contig	Penn State	SAMN03002792	GCA_000830195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/195/GCA_000830195.1_ASM83019v1	25620962	-
Pantoea sp. GM01	1144320	PRJNA83063	83063	Proteobacteria	Gammaproteobacteria	5.32055	54.4	-	AKIU01	102	4961	4821	7/27/12	5/19/17	Contig	Oak Ridge National Lab	SAMN00839628	GCA_000282675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/675/GCA_000282675.1_Pantoea.strGM01_v1.0	23045501	GM01
Prevotella sp. HJM029	1433844	PRJNA230851	230851	FCB group	Bacteroidetes/Chlorobi group	3.02389	45.1	-	AZHT01	150	2691	2480	3/21/14	4/9/17	Scaffold	"Huashan Hospital, Fudan University"	SAMN02437139	GCA_000599605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/605/GCA_000599605.1_HJM029	-	HJM029
Enterococcus sp. HMSC072G01	1715036	PRJNA296163	296163	Terrabacteria group	Firmicutes	2.87652	37.7	-	LTKH01	311	2946	2799	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04495787	GCA_001809135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/135/GCA_001809135.1_ASM180913v1	-	HMSC072G01
Lactobacillus sp. HMSC24D01	1581062	PRJNA269831	269831	Terrabacteria group	Firmicutes	1.91449	52.4	-	LWNM01	110	1896	1751	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436212	GCA_001807655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/655/GCA_001807655.1_ASM180765v1	-	HMSC24D01
Methylophilus sp. Q8	1506586	PRJNA251775	251775	Proteobacteria	Betaproteobacteria	2.90005	50.6	-	JUHE01	1	2783	2700	12/9/14	6/20/17	Contig	DOE Joint Genome Institute	SAMN02841243	GCA_000800115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/115/GCA_000800115.1_ASM80011v1	25657279	Q8
Novosphingobium sp. AP12	1144305	PRJNA83033	83033	Proteobacteria	Alphaproteobacteria	5.61162	65.9	-	AKKE01	187	5177	4913	7/27/12	5/19/17	Contig	Oak Ridge National Lab	SAMN00789124	GCA_000281975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/975/GCA_000281975.1_Novosphingobium.strAP12_v1.0	23045501	AP12
Treponema endosymbiont of Eucomonympha sp.	1580831	PRJDB3365	286024	Spirochaetes	Spirochaetia	1.93762	55.1	-	BBPX01	878	-	-	6/5/15	10/6/15	Contig	"Microbe Division (RIKEN BRC JCM), RIKEN BioResource Center"	SAMD00023471	GCA_001028565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/565/GCA_001028565.1_ASM102856v1	25979941	D2
Arcobacter sp. UBA1348	1946044	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.8436	26.8	-	DBSG01	46	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06453401	GCA_002306255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/255/GCA_002306255.1_ASM230625v1	28894102	-
Anabaena sp. AL93	1678133	PRJNA294801	294801	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.66251	38.4	-	LJOU01	217	5097	4693	6/20/16	6/20/16	Contig	Oregon State University	SAMN04028823	GCA_001672085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/085/GCA_001672085.1_ASM167208v1	-	-
Citrobacter sp. MGH 55	1439319	PRJNA234254	234254	Proteobacteria	Gammaproteobacteria	5.1788	53.1	-	JMUK01	4	5108	4786	5/19/14	4/10/17	Scaffold	Broad Institute	SAMN02581387	GCA_000692135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/135/GCA_000692135.1_Citr_sp_MGH_55_V1	-	MGH 55
Methylobacterium sp. 285MFTsu5.1	1172187	PRJNA187943	187943	Proteobacteria	Alphaproteobacteria	6.62855	71	-	ARTI01	95	6284	6024	4/26/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441639	GCA_000383455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/455/GCA_000383455.1_ASM38345v1	-	285MFTsu5.1
Herbaspirillum sp. B501	137773	PRJDA69981	69981	Proteobacteria	Betaproteobacteria	6.28457	61.8	-	BADJ01	1546	6023	4774	12/26/12	5/18/17	Contig	Kazusa DNA Research Institute	SAMD00036580	GCA_000333575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/575/GCA_000333575.1_ASM33357v1	-	B501
Amycolatopsis sp. CB00013	1703945	PRJNA293172	293172	Terrabacteria group	Actinobacteria	9.01603	68.9	-	LIWC01	9	8426	8256	12/15/16	4/16/17	Scaffold	The Scripps Research Institute	SAMN03999394	GCA_001905755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/755/GCA_001905755.1_ASM190575v1	27999165	CB00013
Candidatus Arthromitus sp. SFB-1	1054942	PRJNA68497	68497	Terrabacteria group	Firmicutes	1.27027	28	-	AFXR01	367	1569	1547	3/14/12	7/29/15	Contig	"Stanford University, Relman Lab"	SAMN00630892	GCA_000252665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/665/GCA_000252665.2_ASM25266v2	22434425	SFB-1
Paracoccus sp. MKU1	1745182	PRJNA298725	298725	Proteobacteria	Alphaproteobacteria	5.38871	66.7	-	LLWQ01	242	5476	5025	11/23/15	4/11/17	Contig	Madurai Kamaraj University	SAMN04194251	GCA_001447385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/447/385/GCA_001447385.1_ASM144738v1	27326263	MKU1
Nocardioides sp. Leaf307	1736331	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.95387	74.2	-	LMNY01	5	3667	3566	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151721	GCA_001423135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/135/GCA_001423135.1_Leaf307	26633631	Leaf307
Epulopiscium sp. SCG-B11WGA-EpuloA1	1710701	PRJNA294498	294498	Terrabacteria group	Firmicutes	3.38131	31.2	-	LJDB01	109	2860	2718	2/2/17	2/2/17	Scaffold	King Abdullah University of Science and Technology (KAUST)	SAMN04027070	GCA_001983455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/455/GCA_001983455.1_ASM198345v1	-	-
Erythrobacter sp. YT30	1735012	PRJNA297735	297735	Proteobacteria	Alphaproteobacteria	3.20269	56.9	-	LMAF01	4	3101	3033	1/29/16	4/11/17	Contig	Xiamen University	SAMN04166239	GCA_001542875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/875/GCA_001542875.1_ASM154287v1	-	YT30
Sulfitobacter sp. HI0027	1822226	PRJNA305749	305749	Proteobacteria	Alphaproteobacteria	4.44109	60.7	-	LWER01	458	4437	4019	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580765	GCA_001634775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/775/GCA_001634775.1_ASM163477v1	-	HI0027
Polaribacter sp. KT 15	1896175	PRJEB18421	355819	FCB group	Bacteroidetes/Chlorobi group	3.22178	29.9	chromosome I:NZ_LT670850.1/LT670850.1	-	1	2859	2766	12/2/16	3/18/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05720268	GCA_900143115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/115/GCA_900143115.1_IMG-taxon_2698536814_annotated_assembly	-	KT 15
Marinobacter sp. ES-1	1396858	PRJNA217943	217943	Proteobacteria	Gammaproteobacteria	3.55974	58.6	-	AXBV01	117	3322	3197	10/21/13	4/9/17	Contig	University of Illinois at Chicago	SAMN02345631	GCA_000475255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/255/GCA_000475255.1_De_Novo_assembly	24356826	ES-1
Roseovarius sp. HI0049	1822235	PRJNA305749	305749	Proteobacteria	Alphaproteobacteria	7.09649	64	-	LWFA01	3470	6949	5661	5/2/16	5/2/16	Contig	Massachusetts Institute of Technology	SAMN04580774	GCA_001635625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/625/GCA_001635625.1_ASM163562v1	-	HI0049
Marinomonas sp. TW1	1561203	PRJNA263859	263859	Proteobacteria	Gammaproteobacteria	3.77287	44.6	-	JSEE01	60	3586	3452	4/21/16	4/12/17	Scaffold	Scripps Institution of Oceanography	SAMN03107786	GCA_001625355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/625/355/GCA_001625355.1_ASM162535v1	-	TW1
Roseobacter sp. MedPE-SW	1860088	PRJNA318731	318731	Proteobacteria	Alphaproteobacteria	3.07565	57.5	-	MPCY01	125	2901	2851	11/10/16	11/10/16	Contig	University Miguel Hernandez	SAMN05219214	GCA_001874225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/225/GCA_001874225.1_ASM187422v1	27446036	-
Methylotenera mobilis JLW8	583345	PRJNA33319	33319	Proteobacteria	Betaproteobacteria	2.54757	45.5	chromosome:NC_012968.1/CP001672.1	-	1	2396	2326	7/15/09	4/7/17	Complete Genome	US DOE Joint Genome Institute	SAMN00017443	GCA_000023705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/705/GCA_000023705.1_ASM2370v1	21622745	JLW8
Psychrobacter sp. P11F6	1699621	PRJNA292373	292373	Proteobacteria	Gammaproteobacteria	3.515	42.7911	chromosome:NZ_CM003594.1/CM003594.1; plasmid pPspP11F6a:NZ_CM003595.1/CM003595.1	LJCE01	2	2921	2798	11/4/15	6/15/17	Chromosome	Norwegian University of Science and Technology	SAMN03975699	GCA_001435295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/295/GCA_001435295.1_ASM143529v1	26879123	P11F6
Maribacter sp. T28	1836467	PRJNA318709	318709	FCB group	Bacteroidetes/Chlorobi group	4.22155	34.3	-	LZFP01	52	3670	3587	6/21/16	4/13/17	Contig	Xiamen University	SAMN04633439	GCA_001673755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/755/GCA_001673755.1_ASM167375v1	-	T28
Caulobacter sp. Root655	1736578	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	5.21801	68.4	-	LMHC01	27	4687	4544	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155847	GCA_001427665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/665/GCA_001427665.1_Root655	26633631	Root655
Janthinobacterium sp. HH01	1198452	PRJNA168352	168352	Proteobacteria	Betaproteobacteria	7.11467	64.2	-	AMWD01	2	6172	5991	2/1/13	5/18/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02415236	GCA_000335815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/815/GCA_000335815.1_ASM33581v1	23405110	HH01
Geobacter sp. UBA1603	1961387	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.35116	55.4	-	DCNF01	108	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451976	GCA_002322035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/035/GCA_002322035.1_ASM232203v1	28894102	-
Eubacterium sp. 68-3-10	1261640	PRJNA341691	341691	Terrabacteria group	Firmicutes	2.81451	52.3	-	MJIE01	3	2614	2486	1/9/17	4/16/17	Contig	USDA-ARS	SAMN05726916	GCA_001940235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/235/GCA_001940235.1_ASM194023v1	27613689	68-3-10
Alcanivorax sp. P2S70	1397527	PRJNA217943	217943	Proteobacteria	Gammaproteobacteria	3.63697	57.8	-	AXBZ01	76	3328	3252	10/21/13	4/9/17	Contig	University of Illinois at Chicago	SAMN02345635	GCA_000475295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/295/GCA_000475295.1_De_Novo_assembly	24356826	P2S70
Cyanothece sp. CCY0110	391612	PRJNA18951	18951	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.88053	36.7	-	AAXW01	163	5631	5221	3/6/07	5/18/17	Contig	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436157	GCA_000169335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/335/GCA_000169335.1_ASM16933v1	-	CCY0110
Brevundimonas sp. EAKA	1495854	PRJNA245925	245925	Proteobacteria	Alphaproteobacteria	3.54016	67.2	-	JMQR01	315	3498	3252	6/4/14	4/9/17	Contig	University of Alaska Fairbanks	SAMN02741905	GCA_000698025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/025/GCA_000698025.1_ASM69802v1	-	EAKA
Limnobacter sp. UBA3510	1946759	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	3.18183	52.2	-	DFPR01	119	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455542	GCA_002377375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/375/GCA_002377375.1_ASM237737v1	28894102	-
Carnobacterium sp. N15.MGS-207	1637504	PRJNA277012	277012	Terrabacteria group	Firmicutes	2.23506	44.4	-	LARH01	167	-	-	4/24/15	6/10/15	Scaffold	The Mayo Clinic	SAMN03450000	GCA_000980215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/215/GCA_000980215.1_ASM98021v1	26021920	-
Pedobacter sp. Leaf216	1735684	PRJNA297956	297956	FCB group	Bacteroidetes/Chlorobi group	5.68006	38.2	-	LMKM01	38	4898	4757	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151685	GCA_001421515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/515/GCA_001421515.1_Leaf216	26633631	Leaf216
Pseudovibrio sp. Ad13	989396	PRJNA298121	298121	Proteobacteria	Alphaproteobacteria	6.00131	51.3	-	LMCC01	36	5455	5288	4/19/16	4/17/17	Contig	University College Cork	SAMN04147117	GCA_001623225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/225/GCA_001623225.1_ASM162322v1	27065959	Ad13
Stenotrophomonas sp. HMSC10F07	1581082	PRJNA269851	269851	Proteobacteria	Gammaproteobacteria	4.49197	66.5	-	LUAA01	158	4124	3973	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03287021	GCA_001807895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/895/GCA_001807895.1_ASM180789v1	-	HMSC10F07
Rhodoferax sp. UBA4409	1947378	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	3.5511	59.8	-	DGQR01	270	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451898	GCA_002390825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/825/GCA_002390825.1_ASM239082v1	28894102	-
Thermotoga sp. TBGT1765	1263836	PRJNA174583	174583	Thermotogae	Thermotogae	1.73944	46.3	-	JSFG01	20	1812	1679	11/17/14	4/9/17	Contig	University of Alberta	SAMN03143097	GCA_000784795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/795/GCA_000784795.1_ASM78479v1	25500512	TBGT1765
Methylacidiphilum infernorum V4	481448	PRJNA28995	28995	PVC group	Verrucomicrobia	2.28715	45.5	chromosome:NC_010794.1/CP000975.1	-	1	2178	2108	5/30/08	3/15/17	Complete Genome	University of Hawaii	SAMN02604183	GCA_000019665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/665/GCA_000019665.1_ASM1966v1	18593465	V4
Ruminococcus sp. HUN007	1514668	PRJNA239502	239502	Terrabacteria group	Firmicutes	4.20718	42	-	JOOA01	4	3704	3425	6/25/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02744687	GCA_000712055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/055/GCA_000712055.1_ASM71205v1	-	HUN007
Thioalkalivibrio sp. ALE25	1158177	PRJNA176569	176569	Proteobacteria	Gammaproteobacteria	2.85524	67.1	-	ARIA01	22	2794	2664	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441347	GCA_000377285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/285/GCA_000377285.1_ASM37728v1	-	ALE25
Bacteroides sp. 1_1_6	469586	PRJNA32435	32435	FCB group	Bacteroidetes/Chlorobi group	6.76074	43	-	ACIC02	15	5630	5320	4/2/09	5/18/17	Scaffold	Broad Institute	SAMN02463690	GCA_000159875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/875/GCA_000159875.2_Bact_sp_1_1_6_V2	-	1_1_6
Exiguobacterium sp. Leaf196	1736298	PRJNA297956	297956	Terrabacteria group	Firmicutes	2.9759	46.7	-	LMPV01	13	3074	2989	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151678	GCA_001423965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/965/GCA_001423965.1_Leaf196	26633631	Leaf196
Thauera sp. KNDSS-Mac4	2019431	PRJNA393786	393786	Proteobacteria	Betaproteobacteria	3.9296	65.9	-	NOIH01	57	3722	3562	8/10/17	8/12/17	Contig	Institute of Microbial Technology	SAMN07341766	GCA_002245655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/655/GCA_002245655.1_ASM224565v1	-	KNDSS-Mac4
Colwellia sp. TT2012	1720342	PRJNA296383	296383	Proteobacteria	Gammaproteobacteria	4.4206	39.5	-	LJYX01	223	3872	3611	11/6/15	4/11/17	Contig	University of California San Diego	SAMN04096880	GCA_001440345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/345/GCA_001440345.1_ASM144034v1	-	TT2012
Coprobacillus sp. CAG:698	1262856	PRJEB980	206718	Terrabacteria group	Firmicutes	1.86501	28.2	-	CAXN01	41	1638	1615	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138449	GCA_000431235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/235/GCA_000431235.1_MGS698	-	-
Shigella sp. FC2928	1886517	PRJNA338027	338027	Proteobacteria	Gammaproteobacteria	5.40157	50.6	-	MDDJ01	350	5845	5069	8/24/16	8/8/17	Contig	Christian Medical College	SAMN05520398	GCA_001712575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/575/GCA_001712575.1_ASM171257v1	-	FC2928
Prochlorococcus sp. MIT 0602	1499499	PRJNA246696	246696	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.75092	36.3	-	JNAV01	9	1862	1796	9/29/14	4/9/17	Contig	MIT	SAMN02769567	GCA_000760195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/195/GCA_000760195.1_ASM76019v1	25977791	MIT 0602
Fusobacterium sp. CM21	936562	PRJNA165903	165903	Fusobacteria	Fusobacteriia	2.36083	27.7	-	AZYU01	471	2125	2010	1/13/14	4/17/17	Contig	JCVI	SAMN02597442	GCA_000517705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/705/GCA_000517705.1_FspCM21v1.0	-	CM21
Azospirillum sp. CAG:239	1262705	PRJEB778	206671	Proteobacteria	Alphaproteobacteria	1.797	48.9	-	CBDV01	109	1831	1791	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138703	GCA_000436375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/375/GCA_000436375.1_MGS239	-	-
Desulfovibrio sp. X2	941449	PRJNA208571	208571	Proteobacteria	delta/epsilon subdivisions	3.91229	68	-	ATHV01	66	3464	3395	7/11/13	4/17/17	Contig	Oak Ridge National Lab	SAMN02207452	GCA_000422205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/205/GCA_000422205.1_Desulfococcus_X2_v1.0	23950126	X2
Actinomyces sp. oral taxon 178 str. F0338	888051	PRJNA53009	53009	Terrabacteria group	Actinobacteria	2.81711	69.9	-	AEUH01	43	2384	2122	1/24/11	4/17/17	Scaffold	Baylor College of Medicine	SAMN00210764	GCA_000186685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/685/GCA_000186685.1_ASM18668v1	-	F0338
Micromonospora sp. NRRL B-16802	1415541	PRJNA238534	238534	Terrabacteria group	Actinobacteria	6.77421	70.9	-	LGEB01	142	6092	5856	9/4/15	4/11/17	Contig	University of Illinois	SAMN02900647	GCA_001279555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/555/GCA_001279555.1_ASM127955v1	-	NRRL B-16802
Rhodobacter sp. CACIA14H1	1408890	PRJNA223271	223271	Proteobacteria	Alphaproteobacteria	3.87432	66.6	-	AYNO01	236	3821	3571	12/2/13	5/8/14	Contig	Universidade Federal do Para	SAMN02389757	GCA_000500915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/915/GCA_000500915.1_Q27bRhosp1.0	24435858	-
Parabacteroides sp. ASF519	1235803	PRJNA176004	176004	FCB group	Bacteroidetes/Chlorobi group	6.87139	43.5	-	AQFV01	4	5458	5248	4/8/13	6/12/17	Scaffold	Broad Institute	SAMN01731008	GCA_000364265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/265/GCA_000364265.1_Para_sp_ASF519_V1	24723722	ASF519
Mesotoga prima MesG1.Ag.4.2	660470	PRJNA48995	48995	Thermotogae	Thermotogae	2.97595	45.4977	chromosome:NC_017934.1/CP003532.1; plasmid pTHEBA.01:NC_017935.1/CP003533.1	-	2	2755	2656	5/17/12	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00025417	GCA_000147715.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/715/GCA_000147715.3_ASM14771v3	22798451	MesG1.Ag.4.2
uncultured Dorea sp.	286138	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.01802	40.7	-	FMEH01	53	2948	2895	8/16/16	8/16/16	Scaffold	SC	SAMEA3545334	GCA_900066515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/515/GCA_900066515.1_13470_2_87	-	-
Acidaminococcus sp. UBA2733	1945915	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.25811	55.8	-	DEKB01	79	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06452048	GCA_002353655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/655/GCA_002353655.1_ASM235365v1	28894102	-
Ralstonia sp. A12	1217052	PRJNA266745	266745	Proteobacteria	Betaproteobacteria	6.10471	63.5	-	JSZO01	60	5639	5458	12/16/14	4/17/17	Contig	University of Malaya	SAMN03174118	GCA_000801955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/955/GCA_000801955.1_ASM80195v1	-	A12
Propionibacterium sp. KPL1852	1203576	PRJNA169465	169465	Terrabacteria group	Actinobacteria	2.52771	63.4	-	AXMJ01	4	2351	2188	10/21/13	4/17/17	Scaffold	Broad Institute	SAMN02597016	GCA_000477695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/695/GCA_000477695.1_Prop_sp_KPL1852_V1	-	KPL1852
Olsenella sp. Marseille-P2936	1852385	PRJEB18030	354755	Terrabacteria group	Actinobacteria	2.27677	66.1	-	FPLI01	37	2238	1886	11/23/16	4/16/17	Scaffold	URMITE	SAMEA4555318	GCA_900120385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/385/GCA_900120385.1_PRJEB18030	-	Marseille-P2936
Alistipes sp. An31A	1965631	PRJNA377666	377666	FCB group	Bacteroidetes/Chlorobi group	2.61869	61.9	-	NFIO01	26	2142	2040	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473718	GCA_002159425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/425/GCA_002159425.1_ASM215942v1	-	An31A
Campylobacter sp. FOBRC14	936554	PRJNA78557	78557	Proteobacteria	delta/epsilon subdivisions	2.14235	44.1	-	ALJJ01	19	2259	2149	8/15/12	4/17/17	Contig	J. Craig Venter Institute	SAMN00828782	GCA_000287855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/855/GCA_000287855.1_CspFOBRC14v1.0	-	FOBRC14
Neisseria sp. HMSC06F02	1581124	PRJNA269893	269893	Proteobacteria	Betaproteobacteria	2.43105	51.2	-	JZWO01	118	2361	2150	3/13/15	4/10/17	Scaffold	The Genome Institute at Washington University	SAMN03287033	GCA_000952795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/795/GCA_000952795.1_ASM95279v1	-	HMSC06F02
Porphyromonas sp. COT-108 OH1349	1537504	PRJNA258396	258396	FCB group	Bacteroidetes/Chlorobi group	2.33061	44.6	-	JRAH01	43	1997	1875	10/27/14	4/9/17	Contig	UC Davis	SAMN03002868	GCA_000768755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/755/GCA_000768755.1_ASM76875v1	25858832	COT-108 OH1349
Eggerthella sp. CAG:209	1262875	PRJEB758	206605	Terrabacteria group	Actinobacteria	1.87427	52.7	-	CBDM01	83	1770	1726	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138690	GCA_000436075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/075/GCA_000436075.1_MGS209	-	-
Tannerella sp. oral taxon BU063 isolate Cell 6/7/9	1411021	PRJNA222526	222526	FCB group	Bacteroidetes/Chlorobi group	3.47695	55.1	-	AYYD01	1291	2993	2935	12/18/13	12/18/13	Contig	The Ohio State University	SAMN02419810	GCA_000510525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/510/525/GCA_000510525.1_BU063sc679	-	-
Labrenzia sp. UBA4493	1946681	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	6.06325	59	-	DGNL01	18	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450412	GCA_002388925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/925/GCA_002388925.1_ASM238892v1	28894102	-
Bartonella sp. Coyote22sub2	1933911	PRJNA360985	360985	Proteobacteria	Alphaproteobacteria	1.56143	35.9	chromosome:NZ_CP019785.1/CP019785.1	-	1	1349	1210	3/7/17	3/10/17	Chromosome	University of Basel	SAMN06213873	GCA_002022565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/565/GCA_002022565.1_ASM202256v1	-	Coyote22sub2
Peptoniphilus sp. oral taxon 375 str. F0436	879308	PRJNA52051	52051	Terrabacteria group	Firmicutes	1.95055	41.4	-	AFUH01	1	2078	1816	7/25/11	4/17/17	Contig	J. Craig Venter Institute	SAMN00116783	GCA_000221565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/565/GCA_000221565.2_ASM22156v1	-	F0436
Veillonella sp. AS16	936589	PRJNA165949	165949	Terrabacteria group	Firmicutes	1.94614	43.1	-	AZYX01	22	1772	1712	1/13/14	4/17/17	Contig	JCVI	SAMN02597445	GCA_000517785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/785/GCA_000517785.1_VspAS16v1.0	-	AS16
Capnocytophaga sp. oral taxon 380 str. F0488	1127693	PRJNA80245	80245	FCB group	Bacteroidetes/Chlorobi group	2.63429	39.4	-	AMES01	76	2318	2203	12/10/12	4/16/17	Scaffold	Washington University	SAMN02436932	GCA_000318255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/255/GCA_000318255.2_ASM31825v2	-	F0488
Coprococcus sp. CAG:131_42_139	1896997	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.89369	43.6	-	MNSE01	14	1725	1651	12/23/16	12/23/16	Scaffold	None	SAMN05717262	GCA_001916305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/305/GCA_001916305.1_ASM191630v1	27819664	-
Delftia sp. JD2	469553	PRJNA286799	286799	Proteobacteria	Betaproteobacteria	6.75589	66.4	-	LFJT01	181	6107	5848	7/8/16	4/17/17	Contig	IIBCE	SAMN03770707	GCA_001682645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/645/GCA_001682645.1_ASM168264v1	-	JD2
Collinsella sp. An307	1965630	PRJNA377666	377666	Terrabacteria group	Actinobacteria	2.2159	62.9	-	NFIP01	17	1984	1886	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473717	GCA_002161805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/805/GCA_002161805.1_ASM216180v1	-	An307
Thalassospira sp. MIT1004	1882733	PRJNA331153	331153	Proteobacteria	Alphaproteobacteria	4.79503	54.7	-	MCAO01	47	4469	4380	11/1/16	4/13/17	Contig	MIT	SAMN05438901	GCA_001858545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/545/GCA_001858545.1_ASM185854v1	-	MIT1004
Sulfurospirillum sp. UBA1314	1947592	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.73974	40.7	-	DBTO01	295	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06454870	GCA_002307095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/095/GCA_002307095.1_ASM230709v1	28894102	-
Loktanella sp. UBA2038	1946765	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.80863	54.4	-	DDBG01	100	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451943	GCA_002333375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/375/GCA_002333375.1_ASM233337v1	28894102	-
Alteromonas sp. PEL 67E	1892904	PRJNA340035	340035	Proteobacteria	Gammaproteobacteria	4.4336	44.6	-	MEJH01	29	3860	3713	1/17/17	4/16/17	Contig	UFRJ	SAMN05630991	GCA_001953635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/635/GCA_001953635.1_ASM195363v1	-	PEL 67E
Afipia sp. OHSU_I-C4	1297863	PRJNA191809	191809	Proteobacteria	Alphaproteobacteria	5.08251	61.1	-	APJF01	50	4917	4780	11/20/13	4/9/17	Contig	FDA	SAMN02952942	GCA_000497635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/635/GCA_000497635.1_OHSU_J-C4	24155888	OHSU_I-C4
Pseudonocardia sp. P1	761194	PRJNA47929	47929	Terrabacteria group	Actinobacteria	6.38877	73.2	-	ADUJ01	875	6302	5595	8/27/10	5/19/17	Contig	TGAC	SAMN02471721	GCA_000178675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/675/GCA_000178675.1_ASM17867v1	20796277	P1
Haemophilus sp. HMSC068C11	1739522	PRJNA300173	300173	Proteobacteria	Gammaproteobacteria	1.90434	39.5	-	LTTC01	25	1854	1775	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480439	GCA_001815355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/355/GCA_001815355.1_ASM181535v1	-	HMSC068C11
Methanosarcina sp. 2.H.T.1A.15	1483596	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.08005	42.8	-	JJOW01	352	3607	3228	4/23/15	4/10/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708988	GCA_000979415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/415/GCA_000979415.1_gtlEnvA5udCFS	25756680	2.H.T.1A.15
Aerococcus sp. HMSC072A12	1739333	PRJNA299983	299983	Terrabacteria group	Firmicutes	2.17302	47.1	-	LTFC01	59	1978	1888	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477642	GCA_001811965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/965/GCA_001811965.1_ASM181196v1	-	HMSC072A12
Selenomonas sp. oral taxon 138 str. F0429	1127695	PRJNA80253	80253	Terrabacteria group	Firmicutes	2.38453	56.8	-	AMEO01	33	2316	2163	12/10/12	4/16/17	Scaffold	Washington University	SAMN02436930	GCA_000318175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/175/GCA_000318175.2_ASM31817v2	-	F0429
Thiomonas sp. CB6	554133	PRJEB8796	321286	Proteobacteria	Betaproteobacteria	23.3766	52.2	-	CTRJ01	26	3899	3831	5/11/16	5/11/16	Scaffold	Genoscope CEA	SAMEA3305384	GCA_900004565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/004/565/GCA_900004565.1_BBA-C_PRJEB8796_v1	-	CB6
Rhodanobacter sp. 115	1162282	PRJNA89543	89543	Proteobacteria	Gammaproteobacteria	4.23976	64.7	-	AJXS01	485	3886	3279	5/23/12	5/19/17	Contig	NCBI / NLM / NIH	SAMN02469842	GCA_000264335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/335/GCA_000264335.1_Rh115	22843592	115
Rothia sp. HMSC072B03	1715109	PRJNA296237	296237	Terrabacteria group	Actinobacteria	2.23583	61.9	-	LTJM01	19	1788	1687	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477516	GCA_001809565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/565/GCA_001809565.1_ASM180956v1	-	HMSC072B03
Sphingobacterium sp. T2	1590596	PRJNA271304	271304	FCB group	Bacteroidetes/Chlorobi group	3.04055	41.3	-	JXAC01	327	2991	2076	1/5/15	4/10/17	Contig	University of British Columbia	SAMN03273852	GCA_000814685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/685/GCA_000814685.1_ASM81468v1	-	T2
Desulfosporosinus sp. FKA	1969834	PRJNA379503	379503	Terrabacteria group	Firmicutes	4.89109	41.6	-	NAHZ01	34	4739	4505	6/16/17	6/21/17	Contig	Sun Yat-sen University	SAMN06610394	GCA_002196785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/785/GCA_002196785.1_ASM219678v1	-	FKA
Citromicrobium sp. RCC1878	1647103	PRJNA282064	282064	Proteobacteria	Alphaproteobacteria	3.28157	64.8	-	LBLZ01	14	3200	3126	10/2/15	4/11/17	Contig	Xiamen University	SAMN03566749	GCA_001306355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/355/GCA_001306355.1_ASM130635v1	-	RCC1878
Megasphaera sp. DJF_B143	537288	PRJNA305346	305346	Terrabacteria group	Firmicutes	2.58125	49.5	-	LODR01	32	2382	2261	1/5/16	4/16/17	Contig	Aarhus University	SAMN04324612	GCA_001494645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/645/GCA_001494645.1_ASM149464v1	26950318	DJF_B143
Vibrio parahaemolyticus	670	PRJNA259940	259940	Proteobacteria	Gammaproteobacteria	5.17166	45.4866	chromosome 1:NZ_CP009847.1/CP009847.1; chromosome 2:NZ_CP009848.1/CP009848.1; plasmid pFORC4:NZ_CP009849.1/CP009849.1	-	3	4992	4713	11/5/15	4/10/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN03140317	GCA_001433415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/415/GCA_001433415.1_ASM143341v1	-	FORC_004
Pusillimonas sp. UBA2680	1947366	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	3.23939	54.3	-	DEMC01	30	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06453893	GCA_002354695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/695/GCA_002354695.1_ASM235469v1	28894102	-
Nitrosopumilus sp. BACL13 MAG-120910-bin56	1655560	PRJNA273799	273799	TACK group	Thaumarchaeota	0.740497	32.8	-	LIAK01	345	912	731	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741945	GCA_001438895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/895/GCA_001438895.1_ASM143889v1	-	-
Nitrospina sp. SPGG3	1842521	PRJNA297058	297058	Nitrospinae/Tectomicrobia group	Nitrospinae	1.93335	54.6	-	LXTJ01	331	-	-	5/13/16	5/13/16	Contig	University of Southern California	SAMN04113180	GCA_001643565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/565/GCA_001643565.1_ASM164356v1	27208118	-
Francisella sp. TX076608	573568	PRJNA260076	260076	Proteobacteria	Gammaproteobacteria	2.253	32	-	JRXS01	7	2244	2016	11/8/16	4/17/17	Contig	Los Alamos National Laboratory	SAMN03107516	GCA_001870885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/885/GCA_001870885.1_FAK_1	-	TX076608
Halomonas sp. HL-93	1666906	PRJEB13869	320704	Proteobacteria	Gammaproteobacteria	4.14454	55.9	chromosome I:NZ_LT593974.1/LT593974.1	-	1	3846	3716	6/10/16	4/12/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04488143	GCA_900086985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/985/GCA_900086985.1_IMG-taxon_2623620618_annotated_assembly	-	HL-93
Idiomarina sp. T82-3	1794809	PRJNA308326	308326	Proteobacteria	Gammaproteobacteria	2.72366	47.3	-	LSBQ01	38	2554	2554	2/29/16	2/29/16	Contig	The Ohio State University	SAMN04432559	GCA_001577655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/655/GCA_001577655.1_ASM157765v1	-	-
Hyphomicrobium sp. SCN 65-11	1660102	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	3.7297	64.6	-	MEEB01	397	3672	3274	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652447	GCA_001724295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/295/GCA_001724295.1_ASM172429v1	26031303	-
Acidiphilium sp. 21-68-69	1970295	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	1.81482	67.9	-	NCBM01	884	2244	1999	8/16/17	8/16/17	Contig	None	SAMN06622424	GCA_002279225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/225/GCA_002279225.1_ASM227922v1	-	-
Aeromicrobium sp. Leaf291	1736325	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.57152	71.7	-	LMNM01	4	3516	3438	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151715	GCA_001423365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/365/GCA_001423365.1_Leaf291	26633631	Leaf291
Xanthomonas sp. NCPPB1128	1775876	PRJNA287209	287209	Proteobacteria	Gammaproteobacteria	4.95043	68.9	-	LFME01	71	4211	4082	6/29/15	4/10/17	Contig	University of Exeter	SAMN03777426	GCA_001043115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/115/GCA_001043115.1_NCPPB1128	26500625	NCPPB1128
Paenibacillus peoriae	59893	PRJNA284101	284101	Terrabacteria group	Firmicutes	6.21981	45.4737	chromosome:NZ_CP011512.1/CP011512.1; plasmid unnamed:NZ_CP011513.1/CP011513.1	-	2	5507	5219	8/21/15	4/4/17	Complete Genome	KRIBB	SAMN03699894	GCA_001272655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/655/GCA_001272655.2_ASM127265v2	-	HS311
Sulfurimonas sp. RIFOXYB12_FULL_35_9	1802256	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.50119	35.6	-	MICC01	128	2531	2335	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314466	GCA_001829715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/715/GCA_001829715.1_ASM182971v1	27774985	-
Akkermansia sp. 54_46	1896967	PRJNA321218	321218	PVC group	Verrucomicrobia	2.9665	55.3	-	MNUD01	36	2610	2518	12/23/16	12/23/16	Scaffold	None	SAMN05717313	GCA_001917295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/295/GCA_001917295.1_ASM191729v1	27819664	-
Chryseobacterium sp. OV259	1500286	PRJNA247528	247528	FCB group	Bacteroidetes/Chlorobi group	3.03266	33.8	-	JQKA01	14	2857	2783	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02787084	GCA_000745795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/795/GCA_000745795.1_ASM74579v1	-	OV259
Cellulomonas sp. URHE0023	1380354	PRJNA213791	213791	Terrabacteria group	Actinobacteria	4.21044	71	-	JIAN01	13	3958	3858	4/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743917	GCA_000688475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/475/GCA_000688475.1_ASM68847v1	-	URHE0023
Brevibacterium sp. JCM 18882	1305649	PRJDB951	243795	Terrabacteria group	Actinobacteria	3.45482	67	-	BBGH01	1459	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016944	GCA_001313665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/665/GCA_001313665.1_ASM131366v1	-	JCM 18882
Hydrogenophaga sp. IBVHS2	1985170	PRJNA384425	384425	Proteobacteria	Betaproteobacteria	3.17118	68.7	-	NFUT01	7	3019	2947	5/10/17	5/22/17	Scaffold	University of Oslo	SAMN06840508	GCA_002127215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/215/GCA_002127215.1_ASM212721v1	-	IBVHS2
Cycloclasticus sp. symbiont of Poecilosclerida sp. N	1840472	PRJNA318572	318572	Proteobacteria	Gammaproteobacteria	1.91643	42.7	-	LWTM01	77	1883	1755	4/19/17	4/19/17	Scaffold	Max Planck Institute for Marine Microbiology	SAMN04858325	GCA_002101205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/205/GCA_002101205.1_ASM210120v1	-	-
Methylophaga sp. 42_25_T18	1856285	PRJNA320927	320927	Proteobacteria	Gammaproteobacteria	2.13796	41.9	-	MAAJ01	15	2114	2060	5/31/17	5/31/17	Contig	Lawrence Berkeley National Lab	SAMN05179557	GCA_002163085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/085/GCA_002163085.1_ASM216308v1	28652349	-
Mesorhizobium sp. WSM3626	1040987	PRJNA209221	209221	Proteobacteria	Alphaproteobacteria	6.28366	62.7	-	AZUY01	106	6259	5856	1/3/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02597203	GCA_000513935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/935/GCA_000513935.1_ASM51393v1	-	WSM3626
Micavibrio sp. UBA1618	1946906	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.57671	43.6	-	DCMQ01	151	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454492	GCA_002321835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/835/GCA_002321835.1_ASM232183v1	28894102	-
Thiomicrospira sp. ALE5	748650	PRJEB17196	351294	Proteobacteria	Gammaproteobacteria	2.06051	45.7	-	FOYY01	7	2022	1941	11/1/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03092900	GCA_900112445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/445/GCA_900112445.1_IMG-taxon_2593339253_annotated_assembly	-	ALE5
Variovorax sp. Root434	1736536	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	6.32219	66.9	-	LMEK01	29	5923	5741	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155805	GCA_001426595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/595/GCA_001426595.1_Root434	26633631	Root434
Rhodovulum sulfidophilum	35806	PRJNA345612	345612	Proteobacteria	Alphaproteobacteria	4.25623	67.1	-	MSYR01	16	4048	3810	1/10/17	4/6/17	Scaffold	"Department of Biology, Washington University in St. Louis"	SAMN05876237	GCA_001941745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/745/GCA_001941745.1_ASM194174v1	-	AB30
Vibrio crassostreae	246167	PRJEB5884	284690	Proteobacteria	Gammaproteobacteria	5.56474	44.2	-	CCKE01	177	5054	4873	5/20/15	4/3/17	Contig	STATION BIOLOGIQUE DE ROSCOFF	SAMEA2591297	GCA_001048555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/555/GCA_001048555.1_VLGP8_PRJEB5884	-	LGP8
Vibrio tasmaniensis 1F-187	1191322	PRJNA167019	167019	Proteobacteria	Gammaproteobacteria	5.32895	43.7	-	AJZM02	436	4806	4550	6/25/12	4/5/17	Scaffold	Broad Institute	SAMN02470503	GCA_000272405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/405/GCA_000272405.2_ASM27240v2	22955834	1F-187
Acinetobacter venetianus	52133	PRJNA260596	260596	Proteobacteria	Gammaproteobacteria	3.59346	39	-	JRUK01	90	3459	3280	3/9/16	4/5/17	Contig	University of Florence	SAMN03103718	GCA_001584665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/665/GCA_001584665.1_ASM158466v1	26902269	LUH7437
Leptospira sp. CLM-U50	1958811	PRJNA374022	374022	Spirochaetes	Spirochaetia	4.30848	39.2	-	NETS01	22	4091	3998	5/19/17	5/24/17	Contig	Venezuelan Scientific Research Institute	SAMN06855518	GCA_002150035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/035/GCA_002150035.1_ASM215003v1	-	CLM-U50
Xanthomonas translucens pv. poae	227946	PRJEB9904	292953	Proteobacteria	Gammaproteobacteria	4.60665	68.3	-	CXOK01	190	3905	3666	8/15/15	4/4/17	Contig	CEBITEC	SAMEA3486272	GCA_001282765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/765/GCA_001282765.1_LMG728	-	-
Snodgrassella alvi	1196083	PRJNA339423	339423	Proteobacteria	Betaproteobacteria	2.49074	41.3	-	NAHG01	172	2296	2167	4/13/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603562	GCA_002088465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/465/GCA_002088465.1_ASM208846v1	-	A-5-24
Vibrio campbellii ATCC BAA-1116	338187	PRJNA210229	210229	Proteobacteria	Gammaproteobacteria	6.03183	45.4642	chromosome I:NC_022269.1/CP006605.1; chromosome II:NC_022270.1/CP006606.1; plasmid unnamed:NC_022271.1/CP006607.1	-	3	5703	5075	9/4/13	4/1/17	Complete Genome	Naval Research Laboratory	SAMN02603672	GCA_000464435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/435/GCA_000464435.1_ASM46443v1	24376440	ATCC BAA-1116
Alicycliphilus sp. UBA4115	1946002	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	2.90994	65.5	-	DFXF01	265	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453439	GCA_002383145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/145/GCA_002383145.1_ASM238314v1	28894102	-
Cupriavidus sp. SK-4	574750	PRJNA239716	239716	Proteobacteria	Betaproteobacteria	7.72023	66.2	-	JFJW01	247	7187	6688	3/28/14	4/17/17	Scaffold	University of North Texas	SAMN02666912	GCA_000611125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/125/GCA_000611125.1_CupriavidusSK41.0	24855306	SK-4
Bacteriovorax sp. UBA2704	1961377	PRJNA348753	348753	Proteobacteria	Oligoflexia	3.06536	35.4	-	DELE01	321	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06454562	GCA_002354235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/235/GCA_002354235.1_ASM235423v1	28894102	-
Rodentibacter pneumotropicus	758	PRJNA343597	343597	Proteobacteria	Gammaproteobacteria	2.4047	40.3	-	MLAE01	143	2282	2111	2/15/17	4/6/17	Contig	University of Copenhagen	SAMN05860605	GCA_001998675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/675/GCA_001998675.1_ASM199867v1	-	Ppn152
Methylotenera sp. 17-45-7	1970396	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	1.88813	45.1	-	NCIB01	196	1945	1848	8/16/17	8/16/17	Scaffold	None	SAMN06622253	GCA_002257375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/375/GCA_002257375.1_ASM225737v1	-	-
Pandoraea sp. CB10b_02	2014535	PRJNA335650	335650	Proteobacteria	Betaproteobacteria	4.84098	65.9	-	NJGW01	87	-	-	7/10/17	7/10/17	Contig	Univ Estadual Paulista UNESP/FCAV	SAMN07198329	GCA_002216225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/225/GCA_002216225.1_cb10b_02	-	-
Sinorhizobium sp. GW3	647869	PRJNA211977	211977	Proteobacteria	Alphaproteobacteria	7.71295	62	-	AUSY01	101	7288	6889	12/7/15	4/16/17	Contig	Huazhong Agricultural University	SAMN04301586	GCA_001461765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/461/765/GCA_001461765.1_ASM146176v1	-	GW3
Wohlfahrtiimonas chitiniclastica	400946	PRJNA382997	382997	Proteobacteria	Gammaproteobacteria	2.07132	43.7	-	NEFG01	10	1939	1874	8/15/17	8/17/17	Contig	Centers for Disease Control and Prevention	SAMN06758450	GCA_002252225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/225/GCA_002252225.1_ASM225222v1	-	F6516
Thioclava sp. F36-6	1915316	PRJNA352381	352381	Proteobacteria	Alphaproteobacteria	4.06006	64.1	-	MPZX01	5	3873	3791	3/6/17	3/9/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05972056	GCA_002020305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/305/GCA_002020305.1_ASM202030v1	-	F36-6
Pseudoxanthomonas sp. GM95	1881043	PRJEB16869	351023	Proteobacteria	Gammaproteobacteria	4.69511	66.6	-	FOAX01	10	4148	4036	10/29/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428989	GCA_900109775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/775/GCA_900109775.1_IMG-taxon_2690315633_annotated_assembly	-	GM95
Halorubrum sp. SD626R	1419722	PRJEB9482	291035	Euryarchaeota	Halobacteria	3.24871	67.6	-	CVRT01	159	3228	2972	7/26/15	8/1/17	Scaffold	University seville	SAMEA3432861	GCA_001261915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/915/GCA_001261915.1_Halorubrum_SD626R	-	SD626R
Clostridium tyrobutyricum	1519	PRJEB12077	305717	Terrabacteria group	Firmicutes	3.19025	30.8	-	FAXL01	139	3162	2988	12/11/15	4/5/17	Contig	IFPEN	SAMEA3699157	GCA_001491075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/075/GCA_001491075.1_IFP923	-	-
Nocardia seriolae	37332	PRJNA349778	349778	Terrabacteria group	Actinobacteria	8.37075	68.1	-	MOYO01	3	7804	7310	11/22/16	4/16/17	Contig	National Institute of Fisheries Science	SAMN05225368	GCA_001885535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/535/GCA_001885535.1_ASM188553v1	-	CK-14008
Acidocella sp. 35-58-6	1970306	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	1.88816	58.4	-	NCFD01	445	2061	1964	8/16/17	8/16/17	Scaffold	None	SAMN06622329	GCA_002281005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/005/GCA_002281005.1_ASM228100v1	-	-
Limnohabitans sp. DM1	1597955	PRJEB9573	292362	Proteobacteria	Betaproteobacteria	4.8966	59.5	-	CXOO01	93	4319	4039	8/8/15	8/1/17	Contig	Biology Centre of CAS	SAMEA3448422	GCA_001269385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/385/GCA_001269385.1_DM1.a1	-	DM1
Oscillibacter sp. CAG:155	1262910	PRJEB727	206657	Terrabacteria group	Firmicutes	2.27738	59.3	-	CBFT01	141	2173	2148	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138728	GCA_000436875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/875/GCA_000436875.1_MGS155	-	-
Mycobacterium fortuitum	1766	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.68624	66.1	-	LZSS01	390	6548	6225	6/17/16	4/5/17	Contig	JCVI	SAMN04691961	GCA_001665545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/545/GCA_001665545.1_ASM166554v1	-	852002-53395_SCH5661144-b
Aeromonas sp. ANP5	1535538	PRJNA323461	323461	Proteobacteria	Gammaproteobacteria	4.77554	58.3	-	LYSS01	91	4441	4251	9/15/16	4/13/17	Contig	Instituto de Ecologia	SAMN05179245	GCA_001729085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/085/GCA_001729085.1_ASM172908v1	-	ANP5
Pseudomonas nitroreducens	46680	PRJNA184698	184698	Proteobacteria	Gammaproteobacteria	7.01401	64.2	-	JNFN01	403	-	-	7/25/14	7/25/14	Contig	Georgia Institute of Technology	SAMN02798137	GCA_000733615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/615/GCA_000733615.1_ASM73361v1	-	B
Pseudomonas parafulva	157782	PRJNA278437	278437	Proteobacteria	Gammaproteobacteria	4.67109	61.9	-	LDSN01	162	4283	4103	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401429	GCA_001477425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/425/GCA_001477425.1_ASM147742v1	26793183	NS96
Pseudomonas oryzihabitans	47885	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.73747	66.3	-	DFNV01	131	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06456098	GCA_002376205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/205/GCA_002376205.1_ASM237620v1	28894102	-
Elizabethkingia meningoseptica	238	PRJNA338129	338129	FCB group	Bacteroidetes/Chlorobi group	4.03792	36.4	-	MDTY01	11	3668	3561	10/25/16	4/5/17	Contig	Michigan State University	SAMN05521514	GCA_001853425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/425/GCA_001853425.1_ASM185342v1	-	EM3
Chryseobacterium indologenes	253	PRJEB17385	351585	FCB group	Bacteroidetes/Chlorobi group	4.88966	37.2	-	FORL01	14	4421	4298	10/31/16	4/14/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421692	GCA_900113975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/975/GCA_900113975.1_IMG-taxon_2687453795_annotated_assembly	-	DSM 16777
Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759	1219067	PRJDB346	172315	Proteobacteria	Gammaproteobacteria	5.10071	45	-	BCUC01	27	4634	4500	2/23/16	4/5/17	Contig	National Institute of Technology and Evaluation	SAMD00046757	GCA_001591085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/085/GCA_001591085.1_ASM159108v1	-	NBRC 15636
Pluralibacter gergoviae	61647	PRJNA285410	285410	Proteobacteria	Gammaproteobacteria	5.69952	58.6	-	LDVW01	593	5599	5124	8/31/15	4/4/17	Contig	University of Queensland	SAMN03753641	GCA_001276415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/415/GCA_001276415.1_ASM127641v1	-	C3
Shewanella algae	38313	PRJNA293692	293692	Proteobacteria	Gammaproteobacteria	4.76513	53	-	LIRM01	102	4236	4092	7/28/17	8/1/17	Scaffold	Georgia Institute of Technology	SAMN04009396	GCA_002237105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/105/GCA_002237105.1_ASM223710v1	-	MN01
Dickeya solani RNS 08.23.3.1.A	1240086	PRJNA176848	176848	Proteobacteria	Gammaproteobacteria	4.92374	56.2	-	AMYI01	1	4312	4112	12/20/13	4/2/17	Scaffold	Institut des Sciences du vegetal	SAMN02597364	GCA_000511285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/285/GCA_000511285.1_SSPACE	24482527	RNS 08.23.3.1.A
Dickeya sp. B16	1576603	PRJNA268269	268269	Proteobacteria	Gammaproteobacteria	4.88566	56.7	-	JXBN01	61	4353	4101	7/28/15	4/10/17	Contig	National Institute of Biology	SAMN03203480	GCA_001187975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/975/GCA_001187975.1_ASM118797v1	26358590	B16
Blautia sp. An46	1965636	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.82031	44.6	-	NFIF01	65	3685	3511	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473728	GCA_002161645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/645/GCA_002161645.1_ASM216164v1	-	An46
Leptotrichia sp. Marseille-P3007	1852388	PRJEB16350	349291	Fusobacteria	Fusobacteriia	2.53864	29.7	-	FNVZ01	5	2401	2302	10/27/16	4/13/17	Contig	URMITE	SAMEA4519251	GCA_900104625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/625/GCA_900104625.1_PRJEB16350	-	Marseille-P3007
Gordonia sp. SGD-V-85	1414651	PRJNA302100	302100	Terrabacteria group	Actinobacteria	5.43908	67.9	-	LNQO01	59	4933	4700	12/4/15	4/11/17	Contig	CSIR-National Chemical Laboratory	SAMN04263916	GCA_001456905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/905/GCA_001456905.1_ASM145690v1	-	SGD-V-85
Anoxybacillus sp. P3H1B	1769293	PRJNA305084	305084	Terrabacteria group	Firmicutes	3.54109	42.6	-	LPUG01	34	3522	3304	2/11/16	4/11/17	Contig	Griffith University	SAMN04324283	GCA_001560855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/855/GCA_001560855.1_ASM156085v1	-	P3H1B
Mucilaginibacter sp. MD40	2029590	PRJNA399803	399803	FCB group	Bacteroidetes/Chlorobi group	4.28513	43.8	-	NRSW01	2	3869	3803	9/8/17	9/11/17	Scaffold	University of Hawaii at Manoa	SAMN07551489	GCA_002288635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/635/GCA_002288635.1_ASM228863v1	-	MD40
Pelomonas sp. JGI 001013-K11	1167741	PRJNA175216	175216	Proteobacteria	Betaproteobacteria	0.507844	66.2	-	AUNN02	58	-	-	7/16/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441466	GCA_000463715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/715/GCA_000463715.2_ASM46371v2	-	JGI 001013-K11
Rhizobacter sp. JGI 0001009-E21	1298877	PRJNA190857	190857	Proteobacteria	Betaproteobacteria	0.296876	57.5	-	AXVZ01	54	-	-	10/25/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441103	GCA_000482645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/645/GCA_000482645.1_ASM48264v1	-	JGI 0001009-E21
Chitinophaga sp. CB10	1891659	PRJNA335650	335650	FCB group	Bacteroidetes/Chlorobi group	7.74183	50.8	-	MLAV01	659	-	-	11/9/16	11/9/16	Scaffold	Univ Estadual Paulista UNESP/FCAV	SAMN05582878	GCA_001870995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/995/GCA_001870995.1_ASM187099v1	-	-
Massilia sp. Root1485	1736472	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	7.25115	66.1	-	LMGB01	38	6335	6126	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155741	GCA_001427325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/325/GCA_001427325.1_Root1485	26633631	Root1485
Bacillus stratosphericus	293386	PRJNA287867	287867	Terrabacteria group	Firmicutes	3.69333	41.3	-	LFMM01	155	3824	3711	8/11/15	4/4/17	Contig	University of Malaya	SAMN03788019	GCA_001265125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/125/GCA_001265125.1_ASM126512v1	-	M53
Pseudomonas protegens	380021	PRJNA290438	290438	Proteobacteria	Gammaproteobacteria	6.95966	63.3	-	LHUU01	17	6377	6223	8/18/15	4/4/17	Contig	JLU	SAMN03891659	GCA_001269485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/485/GCA_001269485.1_ASM126948v1	-	K94.41
Haloferax sp. SB3	1544719	PRJNA305177	305177	Euryarchaeota	Halobacteria	3.90164	65.7	-	LOPW01	66	3870	3727	12/18/15	4/18/17	Contig	"Red Sea Research Center, Saudi Arabia"	SAMN04318428	GCA_001469875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/875/GCA_001469875.1_ASM146987v1	-	SB3
Vibrio jasicida	766224	PRJNA302718	302718	Proteobacteria	Gammaproteobacteria	5.98843	45.2	-	LNQW01	136	5614	5318	2/10/16	4/11/17	Contig	University of Cambridge	SAMN04279322	GCA_001558095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/095/GCA_001558095.1_ASM155809v1	-	NCCB 100079
Porphyrobacter sp. HL-46	1479239	PRJNA283228	283228	Proteobacteria	Alphaproteobacteria	1.27399	63.8	-	LLEX01	391	1510	1490	10/14/15	6/23/16	Scaffold	Pacific Northwest National Laboratroy	SAMN03785512	GCA_001314525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/525/GCA_001314525.1_ASM131452v1	26497460	-
Blastomonas sp. CCH9-F3	1768734	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	4.05377	64.3	-	LSHI01	98	3920	3786	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299405	GCA_001555725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/725/GCA_001555725.1_ASM155572v1	-	CCH9-F3
Citrobacter amalonaticus	35703	PRJNA292629	292629	Proteobacteria	Gammaproteobacteria	4.95258	53.4	-	LIGA01	47	4892	4652	8/31/15	4/4/17	Contig	University of Malaya	SAMN03982883	GCA_001276105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/105/GCA_001276105.1_ASM127610v1	-	YG6
Porphyromonas gulae	111105	PRJNA253708	253708	FCB group	Bacteroidetes/Chlorobi group	2.58871	48.1	-	JRAK01	163	2350	2113	10/27/14	4/2/17	Contig	UC Davis	SAMN03002872	GCA_000768775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/775/GCA_000768775.1_ASM76877v1	25858832	COT-052 OH3439
Cellulosimicrobium cellulans J1	903523	PRJEB20434	382929	Terrabacteria group	Actinobacteria	4.24993	74.7	-	FXAA01	37	3782	3616	4/19/17	4/22/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02744115	GCA_900177495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/495/GCA_900177495.1_IMG-taxon_2528768221_annotated_assembly	-	J1
Mycobacterium asiaticum	1790	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.91014	66.7	-	LZLR01	248	5617	5262	6/17/16	4/5/17	Contig	JCVI	SAMN04634168	GCA_001673345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/345/GCA_001673345.1_ASM167334v1	-	1245335.1
Streptococcus oralis subsp. tigurinus	1077464	PRJNA302888	302888	Terrabacteria group	Firmicutes	2.03638	40.9	-	LNVH01	14	2106	1977	4/14/17	4/21/17	Contig	Genomic Research Laboratory (GRL)	SAMN04283924	GCA_002093575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/575/GCA_002093575.1_ASM209357v1	27505001	859
Acinetobacter indicus	756892	PRJNA356369	356369	Proteobacteria	Gammaproteobacteria	3.18332	45.8	-	MRUS01	234	3102	2850	12/28/16	4/6/17	Scaffold	Robert Koch Institute	SAMN06112603	GCA_001922645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/645/GCA_001922645.1_ASM192264v1	-	IHIT27599
Mycoplasma sp. CAG:776	1262906	PRJEB1002	206805	Terrabacteria group	Tenericutes	1.30315	27.5	-	CBKH01	33	1385	1349	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138794	GCA_000438195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/195/GCA_000438195.1_MGS776	-	-
Raoultella ornithinolytica	54291	PRJNA294405	294405	Proteobacteria	Gammaproteobacteria	5.69282	55.451	chromosome:NZ_CP012555.1/CP012555.1; plasmid 1:NZ_CP012556.1/CP012556.1; plasmid 2:NZ_CP012557.1/CP012557.1; plasmid 3:NZ_CP012558.1/CP012558.1	-	4	5426	5193	9/13/16	4/5/17	Chromosome	Nanjing Agriculture University	SAMN04025340	GCA_001723565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/565/GCA_001723565.1_ASM172356v1	-	18
Brochothrix thermosphacta	2756	PRJNA338887	338887	Terrabacteria group	Firmicutes	2.53926	36.3	-	MDLM01	41	2441	2353	8/29/16	4/5/17	Contig	CSIRO Agriculture and Food; Food Safety and Stability Group	SAMN05567451	GCA_001715735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/735/GCA_001715735.1_ASM171573v1	-	Bth-7806
Pseudomonas lundensis	86185	PRJNA397499	397499	Proteobacteria	Gammaproteobacteria	4.98267	58.3	-	NQKH01	72	4637	4448	8/24/17	8/27/17	Scaffold	CSIRO Agriculture and Food	SAMN07459815	GCA_002269005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/005/GCA_002269005.1_ASM226900v1	-	L1810
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.78812	58.8	-	LNWD01	60	4588	4449	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339840	GCA_001681285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/285/GCA_001681285.1_ASM168128v1	-	F2488
Rhodococcus qingshengii JCM 15477	1303681	PRJDB938	243792	Terrabacteria group	Actinobacteria	7.31037	62.5	-	BBFW01	459	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016939	GCA_001313445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/445/GCA_001313445.1_ASM131344v1	-	JCM 15477
Curtobacterium sp. Leaf154	1736277	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.64071	70.9	-	LMOS01	10	3453	3359	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151657	GCA_001424595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/595/GCA_001424595.1_Leaf154	26633631	Leaf154
Streptomyces rimosus subsp. rimosus	132474	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.55133	72	-	JOBT01	619	8464	7933	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645400	GCA_000718715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/715/GCA_000718715.1_ASM71871v1	-	NRRL WC-3874
Alloscardovia omnicolens	419015	PRJNA267549	267549	Terrabacteria group	Actinobacteria	1.75924	46.9	-	JVFQ01	25	1506	1396	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197668	GCA_001056905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/905/GCA_001056905.1_ASM105690v1	26230489	476_GVAG
Butyrivibrio sp. WCD3002	1280676	PRJNA185701	185701	Terrabacteria group	Firmicutes	4.2546	41.5	-	AUJO01	50	3715	3580	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440670	GCA_000424265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/265/GCA_000424265.1_ASM42426v1	-	WCD3002
Bifidobacterium pseudolongum subsp. globosum DSM 20092	1410605	PRJNA237576	237576	Terrabacteria group	Actinobacteria	1.91504	63.4	-	JDTV01	63	1597	1499	11/4/14	4/2/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442013	GCA_000771145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/145/GCA_000771145.1_DSM-20092	25658111	DSM 20092
Ensifer sp. Root142	1736461	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	7.75676	61.1	-	LMFK01	49	7460	7062	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155730	GCA_001426785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/785/GCA_001426785.1_Root142	26633631	Root142
Lysobacter sp. Root96	1736612	PRJNA297942	297942	Proteobacteria	Gammaproteobacteria	4.41559	68.4	-	LMJN01	8	3989	3876	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155881	GCA_001429315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/315/GCA_001429315.1_Root96	26633631	Root96
Micrococcus sp. KBS0714	1179670	PRJNA373912	373912	Terrabacteria group	Actinobacteria	2.48901	72.9	-	MVDF02	63	2288	2061	2/28/17	8/6/17	Scaffold	Indiana University	SAMN06318586	GCA_002008305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/008/305/GCA_002008305.2_ASM200830v2	-	KBS0714
Trueperella pyogenes	1661	PRJNA267549	267549	Terrabacteria group	Actinobacteria	4.33906	58	-	JWCP01	490	-	-	7/10/15	7/13/16	Contig	University of Washington	SAMN03197071	GCA_001068695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/695/GCA_001068695.1_ASM106869v1	26230489	1117_TPYO
Streptomyces lavendulae subsp. lavendulae	58340	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.96447	72.5	-	JNZE01	4533	-	-	7/2/14	7/2/14	Contig	University of Illinois	SAMN02645332	GCA_000717565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/565/GCA_000717565.2_ASM71756v2	-	NRRL B-2508
Leifsonia sp. 98AMF	1798216	PRJEB17453	351618	Terrabacteria group	Actinobacteria	4.14123	69.8	chromosome I:NZ_LT630032.1/LT630032.1	-	1	3978	3905	10/30/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04515691	GCA_900114505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/505/GCA_900114505.1_IMG-taxon_2639762620_annotated_assembly	-	98AMF
Sphingopyxis sp. MC1	1174684	PRJNA188398	188398	Proteobacteria	Alphaproteobacteria	3.65346	65.2	-	AOUN01	24	3534	3448	4/19/13	4/8/17	Contig	Aalborg University	SAMN02391502	GCA_000371385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/385/GCA_000371385.1_Sphingopyxis_sp._MC1	-	MC1
Brevundimonas naejangsanensis	588932	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.00004	67.2	-	DFQT01	79	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452291	GCA_002377935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/935/GCA_002377935.1_ASM237793v1	28894102	-
Halorubrum ezzemoulense	337243	PRJNA232799	232799	Euryarchaeota	Halobacteria	3.35296	67.7	-	NHOZ01	154	3362	3101	8/15/17	8/17/17	Scaffold	University of Conn.	SAMN02716045	GCA_002252805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/805/GCA_002252805.1_ASM225280v1	24782836	Ga36
Treponema pedis isoM1111	1291000	PRJNA188676	188676	Spirochaetes	Spirochaetia	3.16146	37.2	-	AOTO01	1352	-	-	9/6/13	11/22/13	Contig	Swedish University of Agricultural Sciences	SAMN02379486	GCA_000465115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/115/GCA_000465115.1_Treponema_pedis_isoM1111	23977007	isoM1111
Kocuria sp. WN036	2032628	PRJNA400777	400777	Terrabacteria group	Actinobacteria	3.88678	72.7	-	NSKF01	77	3618	3427	9/6/17	9/8/17	Contig	"Institute of Agricultural c and Regional Planning, Chinese Academy of Agricultural Sciences"	SAMN07573091	GCA_002287015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/015/GCA_002287015.1_ASM228701v1	-	WN036
Desulfobulbus sp. oral taxon 041 str. Dsb4	1302613	PRJNA192194	192194	Proteobacteria	delta/epsilon subdivisions	0.748241	59	-	APKC01	83	-	-	5/31/13	7/29/15	Contig	Oak Ridge National Laboratory	SAMN02470744	GCA_000403925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/925/GCA_000403925.1_Dsb4	-	Dsb4
Pseudomonas denitrificans (nomen rejiciendum)	43306	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	7.07019	66	-	JVZW01	148	6885	6611	7/10/15	5/30/17	Scaffold	University of Washington	SAMN03197142	GCA_001062205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/205/GCA_001062205.1_ASM106220v1	26230489	1184_PDEN
Nitrosospira sp. Nsp11	1855338	PRJEB18380	355787	Proteobacteria	Betaproteobacteria	3.20713	52.8	-	FRBV01	35	3043	2905	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216428	GCA_900142705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/705/GCA_900142705.1_IMG-taxon_2671180073_annotated_assembly	-	Nsp11
Helicobacter sp. 11S02629-2	1476195	PRJNA344861	344861	Proteobacteria	delta/epsilon subdivisions	1.87884	35.7	-	MLAN01	61	1709	1648	8/28/17	8/30/17	Contig	Utrecht University	SAMN05846502	GCA_002272875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/875/GCA_002272875.1_ASM227287v1	28827684	11S02629-2
Bordetella hinzii OH87 BAL007II	1331262	PRJNA202165	202165	Proteobacteria	Betaproteobacteria	4.8859	67	-	JHEM01	40	4660	4517	4/30/14	4/2/17	Contig	JCVI	SAMN02231295	GCA_000657735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/735/GCA_000657735.1_gbh07v01	-	OH87 BAL007II
Faecalibacterium sp. CAG:1138	1262896	PRJEB692	202473	Terrabacteria group	Firmicutes	1.49006	48.6	-	CAXL01	26	1324	1284	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138621	GCA_000434675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/675/GCA_000434675.1_MGS1138	-	-
Serratia fonticola	47917	PRJNA354879	354879	Proteobacteria	Gammaproteobacteria	6.1816	53.4	-	MQRH01	81	5908	5662	12/19/16	4/6/17	Contig	Institute of Experimental Medicine	SAMN06053762	GCA_001908045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/045/GCA_001908045.1_ASM190804v1	-	5l
Vibrio owensii CAIM 1854 = LMG 25443	1229493	PRJDB728	203005	Proteobacteria	Gammaproteobacteria	6.36686	45	-	BAOH01	451	5917	5691	5/14/13	4/1/17	Contig	University of Miyazaki	SAMD00036661	GCA_000400385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/385/GCA_000400385.1_ASM40038v1	23710045	CAIM 1854 = LMG 25443
Burkholderia contaminans	488447	PRJNA397968	397968	Proteobacteria	Betaproteobacteria	8.83388	66.2	-	NQOD01	100	8224	7764	8/25/17	8/28/17	Scaffold	Julius-Liebig-University Giessen	SAMN07498378	GCA_002270525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/270/525/GCA_002270525.1_ASM227052v1	-	293K04B
Enhydrobacter sp. UBA3969	1946459	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.50401	43.7	-	DGCV01	51	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454524	GCA_002385105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/105/GCA_002385105.1_ASM238510v1	28894102	-
Roseburia sp. CAG:309	1262945	PRJEB824	206855	Terrabacteria group	Firmicutes	2.44799	43.2	-	CBGX01	173	2250	2223	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138593	GCA_000434115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/115/GCA_000434115.1_MGS309	-	-
uncultured Methanoculleus sp.	183762	PRJEB10932	303149	Euryarchaeota	Methanomicrobia	2.20022	59.4	-	FIZL01	161	-	-	2/12/16	2/12/16	Scaffold	Center for Microbial Communities	SAMEA3730009	GCA_900025055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/055/GCA_900025055.1_Methanoculleus_bin_genome	-	-
Sutterella sp. UBA1442	1947611	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	1.60134	48.4	-	DCTK01	126	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451879	GCA_002329575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/575/GCA_002329575.1_ASM232957v1	28894102	-
Succinatimonas sp. UBA2802	1947568	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.15299	38.8	-	DEHK01	160	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06452723	GCA_002351845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/351/845/GCA_002351845.1_ASM235184v1	28894102	-
Clostridium saccharobutylicum	169679	PRJNA322819	322819	Terrabacteria group	Firmicutes	5.17334	28.6	-	LZYZ01	16	4543	4285	2/23/17	2/25/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05170517	GCA_002006165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/165/GCA_002006165.1_ASM200616v1	-	L1-8
Virgibacillus sp. IO3-P3-H5	2024555	PRJNA396978	396978	Terrabacteria group	Firmicutes	4.36205	37.2	-	NPOA01	154	4267	4108	9/6/17	9/8/17	Contig	"Institute of Microbiology, CAS "	SAMN07445110	GCA_002287375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/375/GCA_002287375.1_ASM228737v1	-	IO3-P3-H5
Pantoea dispersa	59814	PRJNA278434	278434	Proteobacteria	Gammaproteobacteria	4.89702	57.6	-	LDSG01	98	4565	4383	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401409	GCA_001476765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/765/GCA_001476765.1_ASM147676v1	26793183	SA5
Pseudobutyrivibrio sp. YE44	1520802	PRJEB16254	348882	Terrabacteria group	Firmicutes	3.24205	39	-	FMXT01	28	2958	2848	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910298	GCA_900104335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/335/GCA_900104335.1_IMG-taxon_2593339244_annotated_assembly	-	YE44
Kandleria vitulina	1630	PRJEB16784	350920	Terrabacteria group	Firmicutes	2.07453	35	-	FNZD01	37	2115	1998	10/29/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216514	GCA_900109215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/215/GCA_900109215.1_IMG-taxon_2654588124_annotated_assembly	-	KH4T7
Smithella sp. M82	1678137	PRJNA316022	316022	Proteobacteria	delta/epsilon subdivisions	2.75316	42.8	-	MAEO01	236	-	-	7/12/16	7/12/16	Scaffold	M82	SAMN04957723	GCA_001683985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/985/GCA_001683985.1_ASM168398v1	-	-
Pandoraea pnomenusa	93220	PRJNA266749	266749	Proteobacteria	Betaproteobacteria	5.57425	62.8	-	JTCR01	70	4917	4789	12/24/14	4/2/17	Contig	University of Malaya	SAMN03174139	GCA_000807775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/775/GCA_000807775.1_ASM80777v1	25657265	6399
Methylibium sp. NZG	1686064	PRJNA290033	290033	Proteobacteria	Betaproteobacteria	4.78325	67.9	-	LGRD01	40	4346	4000	8/7/15	8/7/15	Contig	Ocean University of China	SAMN03862017	GCA_001263235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/235/GCA_001263235.1_ASM126323v1	-	-
Salinivibrio sp. IB868	1909447	PRJNA368703	368703	Proteobacteria	Gammaproteobacteria	3.44076	50.5	-	MUEW01	30	3169	3043	2/14/17	4/17/17	Contig	Universidad de Sevilla	SAMN06270241	GCA_001995655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/655/GCA_001995655.1_ASM199565v1	-	IB868
Candidatus Synechococcus spongiarum LMB bulk10D	1449121	PRJNA235061	235061	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.565311	59.4	-	MWLG01	62	594	532	3/3/17	3/3/17	Scaffold	DOE Joint Genome Institute	SAMN02745391	GCA_002017915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/915/GCA_002017915.1_ASM201791v1	-	-
Staphylococcus cohnii	29382	PRJNA263229	263229	Terrabacteria group	Firmicutes	2.58594	32.3	-	JRVV01	58	2504	2357	11/10/16	4/5/17	Contig	CSIR-Institute of Microbial Technology	SAMN03097238	GCA_001876705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/705/GCA_001876705.1_ASM187670v1	-	SE4.1
Vibrio parahaemolyticus	670	PRJNA266097	266097	Proteobacteria	Gammaproteobacteria	5.03817	45.4352	chromosome 1:NZ_CP009982.1/CP009982.1; chromosome 2:NZ_CP009983.1/CP009983.1	-	2	4880	4624	8/5/15	4/10/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN03159469	GCA_001244315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/315/GCA_001244315.1_ASM124431v1	-	FORC_008
Pseudomonas corrugata	47879	PRJNA290438	290438	Proteobacteria	Gammaproteobacteria	6.12673	60.6	-	LHVK01	31	5398	5207	8/18/15	4/4/17	Contig	JLU	SAMN03891677	GCA_001269905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/905/GCA_001269905.1_ASM126990v1	-	DSM 7228
Candidatus Accumulibacter sp. BA-93	1454004	PRJNA236439	236439	Proteobacteria	Betaproteobacteria	4.62626	63.8	-	JEMY01	85	4087	4039	3/3/14	3/3/14	Contig	Australian Centre for Ecogenomics	SAMN02445067	GCA_000585075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/075/GCA_000585075.1_capba93	-	-
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.41843	35.7	-	LZGR01	73	2214	2085	7/21/16	4/10/17	Contig	University of Texas at Austin	SAMN05179596	GCA_001690255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/255/GCA_001690255.1_ASM169025v1	-	App2-1
Lysinibacillus sp. FJAT-14222	1932366	PRJNA294250	294250	Terrabacteria group	Firmicutes	5.61373	36.6	-	LIYL01	78	5528	5201	9/4/15	4/11/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04018715	GCA_001278875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/875/GCA_001278875.1_ASM127887v1	26494684	FJAT-14222
Lactobacillus gallinarum	52242	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.03051	36.5	-	NFLZ01	73	2074	1856	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473572	GCA_002161165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/165/GCA_002161165.1_ASM216116v1	-	An101
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.09945	42.2	-	FTPX01	4	982	913	3/18/17	3/24/17	Contig	Functional Genomics Genter Zurich	SAMEA4555945	GCA_900149405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/405/GCA_900149405.1_19-23a	-	-
Lactobacillus paralimentarius	83526	PRJNA376484	376484	Terrabacteria group	Firmicutes	2.75426	35.1	-	MXAL01	37	2673	2567	6/12/17	6/14/17	Contig	"ChunLab, Inc."	SAMN06434172	GCA_002191155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/155/GCA_002191155.1_ASM219115v1	-	KACC 12383
Lactobacillus kunkeei EFB6	1419324	PRJNA227106	227106	Terrabacteria group	Firmicutes	1.56685	36.9	-	AZBY01	55	1470	1408	5/9/14	4/2/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02767920	GCA_000687335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/335/GCA_000687335.1_LKU1	26203329	EFB6
Devosia sp. Root635	1736575	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	3.81668	64.1	-	LMGZ01	24	3703	3627	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155844	GCA_001427605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/605/GCA_001427605.1_Root635	26633631	Root635
Mycoplasma hyosynoviae	29559	PRJNA238378	238378	Terrabacteria group	Tenericutes	0.850366	27.1	-	JFKH01	53	678	602	5/15/14	4/2/17	Contig	"Newport Laboratories, A Sanofi Company"	SAMN02674105	GCA_000691365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/365/GCA_000691365.1_MhyoNPL6v1.0_of_Mycoplasma_hyosynoviae_strain_NPL6_genome	24903877	NPL6
Gemmatimonas sp. UBA2094	1946567	PRJNA348753	348753	FCB group	Gemmatimonadetes	2.65352	65	-	DCZC01	243	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454934	GCA_002331565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/565/GCA_002331565.1_ASM233156v1	28894102	-
Bosea sp. Root381	1736524	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	5.69073	66.7	-	LMJT01	45	5332	5161	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155793	GCA_001429395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/395/GCA_001429395.1_Root381	26633631	Root381
Kitasatospora sp. CB01950	1703930	PRJNA293172	293172	Terrabacteria group	Actinobacteria	7.64864	72.8	-	LISX01	37	6793	6497	12/15/16	4/16/17	Scaffold	The Scripps Research Institute	SAMN03999379	GCA_001905465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/465/GCA_001905465.1_ASM190546v1	27999165	CB01950
Hymenobacter sp. AT01-02	1571877	PRJNA277296	277296	FCB group	Bacteroidetes/Chlorobi group	5.04399	55.5	-	JZIR02	272	4547	3888	3/24/15	4/11/17	Contig	Technical University of Denmark	SAMN03389110	GCA_000961955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/955/GCA_000961955.2_ASM96195v2	26868392	AT01-02
Kitasatospora aureofaciens	1894	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.59138	71.9	-	LGUY01	269	8469	7980	8/19/15	8/22/17	Contig	University of Illinois	SAMN02900594	GCA_001270665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/665/GCA_001270665.1_ASM127066v1	-	NRRL B-2658
Streptomyces albidoflavus	1886	PRJNA398273	398273	Terrabacteria group	Actinobacteria	6.524	73	-	NTFU01	1153	6115	5172	9/11/17	9/13/17	Scaffold	The University of Queensland 	SAMN07505021	GCA_002289305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/305/GCA_002289305.1_CMB-CS145	-	145
Alteromonas australica	589873	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.6012	44.2	-	DCYV01	266	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450595	GCA_002331525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/525/GCA_002331525.1_ASM233152v1	28894102	-
Vibrio metoecus	1481663	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	4.0067	46.8	-	NMSN01	90	3882	3675	8/31/17	9/2/17	Contig	University of Alberta	SAMN07350495	GCA_002283915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/915/GCA_002283915.1_ASM228391v1	-	OYP8H05
Acetobacter malorum	178901	PRJNA313260	313260	Proteobacteria	Alphaproteobacteria	4.03941	56.9	-	LVHD01	331	3798	2916	5/12/16	4/12/17	Scaffold	Universitat Rovira i Virgili	SAMN04528805	GCA_001642635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/635/GCA_001642635.1_ASM164263v1	-	CECT 7742
Luteibacter sp. 329MFSha	1798239	PRJEB17042	351188	Proteobacteria	Gammaproteobacteria	4.12993	67.7	-	FOJE01	8	3668	3576	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04515660	GCA_900111665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/665/GCA_900111665.1_IMG-taxon_2639762521_annotated_assembly	-	329MFSha
Sulfuricurvum sp. RIFCSPHIGHO2_12_FULL_44_8	1802243	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.63674	42.7	-	MIBP01	731	1830	1119	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316127	GCA_001830665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/665/GCA_001830665.1_ASM183066v1	27774985	-
Vibrio parahaemolyticus	670	PRJNA303095	303095	Proteobacteria	Gammaproteobacteria	5.04556	45.4351	chromosome I:NZ_CP013826.1/CP013826.1; chromosome II:NZ_CP013827.1/CP013827.1	-	2	4887	4621	11/28/16	4/10/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN04285689	GCA_001887055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/055/GCA_001887055.1_ASM188705v1	-	FORC_018
Achromobacter sp. HMSC056C09	1739443	PRJNA300093	300093	Proteobacteria	Betaproteobacteria	6.43343	67.7	-	LTVV01	80	5905	5697	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480366	GCA_001813885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/885/GCA_001813885.1_ASM181388v1	-	HMSC056C09
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	7.00192	44.2	-	MKQL01	80	6290	6150	1/18/17	4/6/17	Contig	Cornell University	SAMN05772514	GCA_001954375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/375/GCA_001954375.1_ASM195437v1	-	FSL R5-0636
Elizabethkingia miricola	172045	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	4.18805	35.8	-	MAHD01	15	3853	3765	3/8/17	3/11/17	Contig	CDC	SAMN05255998	GCA_002023515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/515/GCA_002023515.1_ASM202351v1	-	CSID_3000516464
Bacillus aryabhattai	412384	PRJNA308054	308054	Terrabacteria group	Firmicutes	4.96306	38.2	-	LQQQ01	37	5101	4939	4/13/16	4/5/17	Contig	University of Malaya	SAMN04386399	GCA_001619595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/595/GCA_001619595.1_ASM161959v1	-	M46
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.59792	51	-	MPQO01	121	2587	2425	3/6/17	3/9/17	Contig	Harvard University	SAMN06016261	GCA_002020595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/595/GCA_002020595.1_ASM202059v1	-	-
Citrobacter braakii	57706	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.99358	52.2	-	JUKU01	198	4904	4676	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03198210	GCA_001059745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/745/GCA_001059745.1_ASM105974v1	26230489	989_CKOS
Clostridium baratii	1561	PRJNA343444	343444	Terrabacteria group	Firmicutes	3.05941	28	-	MJHM01	35	2954	2825	3/14/17	3/16/17	Scaffold	Institut Pasteur	SAMN05788118	GCA_002025785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/785/GCA_002025785.1_ASM202578v1	-	694-15
Leisingera sp. ANG-S5	1577901	PRJNA269051	269051	Proteobacteria	Alphaproteobacteria	4.66085	62.6	-	JWLH01	43	4416	4308	1/2/15	4/10/17	Scaffold	University of Connecticut	SAMN03246064	GCA_000813925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/925/GCA_000813925.1_ASM81392v1	25755651	ANG-S5
Fusobacterium hwasookii ChDC F206	1307443	PRJNA193584	193584	Fusobacteria	Fusobacteriia	2.36247	27.1	-	ATKH01	173	2362	2215	8/29/13	4/1/17	Contig	Dental School of Chosun University	SAMN02469581	GCA_000455905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/905/GCA_000455905.1_de_novo	24459284	ChDC F206
Pseudomonas frederiksbergensis	104087	PRJEB16448	349328	Proteobacteria	Gammaproteobacteria	6.39434	58.9	-	FNTF01	2	5952	5700	10/22/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04490185	GCA_900105495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/495/GCA_900105495.1_IMG-taxon_2636416079_annotated_assembly	-	BS3655
Chromobacterium subtsugae	251747	PRJNA353953	353953	Proteobacteria	Betaproteobacteria	4.7704	64.8	-	MQZZ01	164	4448	4296	1/18/17	3/29/17	Contig	Midwestern University	SAMN06034008	GCA_001953805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/805/GCA_001953805.1_ASM195380v1	-	MWU12-2387
Enterobacter ludwigii	299767	PRJNA290024	290024	Proteobacteria	Gammaproteobacteria	4.76602	54.6	-	LGIV01	15	4605	4407	8/7/15	4/3/17	Contig	University of Siena	SAMN03861996	GCA_001263115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/115/GCA_001263115.1_EntNMC_A5miseq	26248383	AOUC-8/14
Frigoribacterium sp. MEB024	1589899	PRJNA273162	273162	Terrabacteria group	Actinobacteria	3.40637	71.2	-	JXQZ01	136	3227	3089	2/19/15	4/10/17	Contig	University of Chicago	SAMN03267928	GCA_000878135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/135/GCA_000878135.1_ASM87813v1	-	MEB024
Mycobacterium immunogenum	83262	PRJNA294421	294421	Terrabacteria group	Actinobacteria	6.06372	64.1	-	LJFS01	113	6213	5917	9/22/15	4/4/17	Contig	US EPA	SAMN04025496	GCA_001296325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/325/GCA_001296325.1_ASM129632v1	-	H076
Aneurinibacillus migulanus	47500	PRJEB15962	348297	Terrabacteria group	Firmicutes	6.24406	43	-	FNED01	88	6347	5988	10/20/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487909	GCA_900100065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/065/GCA_900100065.1_IMG-taxon_2615840722_annotated_assembly	-	DSM 2895
Photobacterium kishitanii	318456	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.83695	38.9	-	LZFC01	79	4370	3968	6/24/16	4/5/17	Contig	FDA/CFSAN	SAMN04507562	GCA_001676215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/215/GCA_001676215.1_ASM167621v1	-	GCSL-P48
Moritella viscosa	80854	PRJEB16014	348508	Proteobacteria	Gammaproteobacteria	5.166	39.3	-	FPLG01	158	4648	4392	11/24/16	4/11/17	Contig	UNIVERSITY OF TROMSO	SAMEA4520406	GCA_900120065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/065/GCA_900120065.1_clc.v6.5.LFI5006.01	-	-
Aliivibrio wodanis	80852	PRJNA302718	302718	Proteobacteria	Gammaproteobacteria	4.59095	38.2	-	LNRN01	105	4159	3992	2/10/16	4/4/17	Contig	University of Cambridge	SAMN04279308	GCA_001557995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/995/GCA_001557995.1_ASM155799v1	-	CL7
Vulcanisaeta sp. JCHS_4	1714253	PRJNA295311	295311	TACK group	Crenarchaeota	2.08422	45.7	-	LOCE01	101	2295	1895	1/15/16	1/15/16	Scaffold	Montana State University	SAMN04045679	GCA_001516705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/705/GCA_001516705.1_ASM151670v1	-	-
Staphylococcus argenteus	985002	PRJEB6396	256293	Terrabacteria group	Firmicutes	2.74963	32.2	-	CCEP01	12	2712	2532	9/6/14	4/2/17	Contig	WTSI	SAMEA1557135	GCA_000752015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/015/GCA_000752015.1_Sa_H115100079	-	-
Klebsiella quasipneumoniae subsp. quasipneumoniae	1667327	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.51653	57.7	-	LFAH01	4	5484	5170	6/19/15	7/29/17	Scaffold	Broad Institute	SAMN03280395	GCA_001033665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/665/GCA_001033665.1_Kleb_pneu_MGH96_V1	-	MGH96
Lactobacillus acetotolerans DSM 20749 = JCM 3825	1423714	PRJDB802	243713	Terrabacteria group	Firmicutes	1.57755	36.2	-	BBBU01	104	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000468	GCA_001311725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/725/GCA_001311725.1_ASM131172v1	-	JCM 3825
Bacillus marisflavi	189381	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.65039	48.2	-	DBEC01	430	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453148	GCA_002293925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/925/GCA_002293925.1_ASM229392v1	28894102	-
Mycobacterium conceptionense	451644	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.49628	66.4	-	LZLN01	266	6271	6056	6/17/16	4/5/17	Contig	JCVI	SAMN04634177	GCA_001673265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/265/GCA_001673265.1_ASM167326v1	-	1165613.5
Trabulsiella odontotermitis	379893	PRJNA291074	291074	Proteobacteria	Gammaproteobacteria	4.56029	54.8	-	LIFW01	79	4362	4134	9/23/15	4/4/17	Scaffold	IBT-UNAM	SAMN03943321	GCA_001297855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/855/GCA_001297855.1_ASM129785v1	26543120	TbO2.7
Lactobacillus agilis	1601	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.18627	41.4	-	LUGO01	105	2226	2014	8/1/17	8/3/17	Scaffold	University of Minnesota	SAMN04498965	GCA_002237855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/855/GCA_002237855.1_ASM223785v1	-	UMNLA1
Dysgonomonas sp. UBA4861	1946424	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.54192	35.7	-	DHEB01	273	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452511	GCA_002399655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/655/GCA_002399655.1_ASM239965v1	28894102	-
Oblitimonas alkaliphila	1697053	PRJNA291610	291610	Proteobacteria	Gammaproteobacteria	2.39703	47.2	chromosome:NZ_CP012365.1/CP012365.1	-	1	2317	2198	8/13/15	4/10/17	Chromosome	CDC	SAMN03948286	GCA_001267315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/315/GCA_001267315.1_ASM126731v1	26679585	E5571
Idiomarina abyssalis	86102	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.63535	47.1	-	DELS01	7	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451361	GCA_002354515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/515/GCA_002354515.1_ASM235451v1	28894102	-
Pantoea septica	472695	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.71122	59.1	-	DDGZ01	361	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06452247	GCA_002352915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/915/GCA_002352915.1_ASM235291v1	28894102	-
Vibrio parahaemolyticus	670	PRJNA284329	284329	Proteobacteria	Gammaproteobacteria	5.01521	45.4351	chromosome 1:NZ_CP012950.1/CP012950.1; chromosome 2:NZ_CP012951.1/CP012951.1	-	2	4804	4552	10/11/16	3/20/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN03701448	GCA_001758605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/605/GCA_001758605.1_ASM175860v1	-	FORC_023
Pseudomonas congelans	200452	PRJEB16279	348857	Proteobacteria	Gammaproteobacteria	5.73706	59.3	-	FNJH01	23	5258	5020	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216596	GCA_900103225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/225/GCA_900103225.1_IMG-taxon_2663762773_annotated_assembly	-	DSM 14939
Methanosaeta sp. NSP1	1917472	PRJNA338276	338276	Euryarchaeota	Methanomicrobia	1.47131	54.8	-	NOLC01	252	1714	1714	8/16/17	8/16/17	Scaffold	The Ohio State University	SAMN05908746	GCA_002256595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/595/GCA_002256595.1_ASM225659v1	-	-
Duganella sp. HH101	1781066	PRJNA309032	309032	Proteobacteria	Betaproteobacteria	7.4973	64.4	-	LRON01	74	6524	6289	10/11/16	4/13/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04320693	GCA_001758795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/795/GCA_001758795.1_ASM175879v1	27833590	HH101
Kocuria kristinae	37923	PRJNA278414	278414	Terrabacteria group	Actinobacteria	2.26504	71.8	-	LDRJ01	211	2062	1876	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401338	GCA_001476205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/205/GCA_001476205.1_ASM147620v1	26793183	SA15
Aureimonas sp. AU20	1349819	PRJDB3816	300645	Proteobacteria	Alphaproteobacteria	5.19583	66.8	-	BBWI01	73	4738	4584	11/7/15	4/11/17	Contig	"Graduate School of Life Sciences, Tohoku University"	SAMD00028756	GCA_001463725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/725/GCA_001463725.1_ASM146372v1	26534993	AU20
Phenylobacterium sp. SCN 70-31	1660129	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	4.89146	69.5	-	MEEX01	61	4648	4522	9/13/16	9/13/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03652473	GCA_001724605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/605/GCA_001724605.1_ASM172460v1	26031303	-
Lactobacillus parabuchneri	152331	PRJNA320351	320351	Terrabacteria group	Firmicutes	2.76943	43.2	-	LYDQ01	67	2656	2495	7/18/16	4/5/17	Contig	Instituto de Productos Lacteos de Asturias (IPLA-CSIC)	SAMN05150101	GCA_001687155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/155/GCA_001687155.1_Lpb10	-	IPLA 11117
Lactobacillus taiwanensis	508451	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.06032	33.9	-	NGOA01	58	2028	1828	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848430	GCA_002253105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/105/GCA_002253105.1_ASM225310v1	-	601c
Lactobacillus aviarius	1606	PRJNA316009	316009	Terrabacteria group	Firmicutes	1.61564	40.3	-	LVKJ01	55	1529	1452	5/25/16	4/5/17	Scaffold	University of Minnesota	SAMN04573029	GCA_001652035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/035/GCA_001652035.1_ASM165203v1	-	UMNLAv9
Bacillus paralicheniformis	1648923	PRJNA319458	319458	Terrabacteria group	Firmicutes	4.45541	45.9	-	LXPD01	52	4564	4333	7/21/16	4/5/17	Contig	APC Microbiome Institute	SAMN04892747	GCA_001691735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/735/GCA_001691735.1_ASM169173v1	-	APC1576
Candidatus Kryptobacter tengchongensis	1643429	PRJEB11787	302418	FCB group	Candidatus Kryptonia	2.68069	36.4	-	FAON01	16	2405	2353	11/18/15	11/18/15	Contig	DOE - Joint Genome Institute	SAMN03436305	GCA_001485605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/605/GCA_001485605.1_JGI_assembly	-	-
Nitrospira sp. SG-bin1	1827376	PRJNA315256	315256	Nitrospirae	Nitrospira	4.41537	56.1	-	LVWS01	48	4311	4154	4/10/17	4/24/17	Scaffold	The University Hong Kong	SAMN04592276	GCA_002083365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/365/GCA_002083365.1_ASM208336v1	28390307	-
Enterobacter kobei	208224	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.87769	55	-	LDCL01	65	4772	4568	5/21/15	4/3/17	Contig	JCVI	SAMN03495976	GCA_001011975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/975/GCA_001011975.1_ASM101197v1	-	GN02225
Vibrio campbellii ATCC BAA-1116	338187	PRJNA19857	19857	Proteobacteria	Gammaproteobacteria	6.05838	45.4023	chromosome I:NC_009783.1/CP000789.1; chromosome II:NC_009784.1/CP000790.1; plasmid pVIBHAR:NC_009777.1/CP000791.1	-	3	5802	5210	8/28/07	8/28/17	Complete Genome	The Vibrio harveyi Genome Sequencing Project	SAMN02603960	GCA_000017705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/705/GCA_000017705.1_ASM1770v1	-	ATCC BAA-1116; BB120
Enterobacter xiangfangensis	1296536	PRJNA278424	278424	Proteobacteria	Gammaproteobacteria	4.72013	55.4	-	LDQS01	60	4536	4340	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401395	GCA_001475875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/875/GCA_001475875.1_ASM147587v1	26793183	NS75
Halothiobacillus sp. 13-55-253	1970379	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	1.63442	55	-	NCKR01	589	1927	1728	8/16/17	8/16/17	Scaffold	None	SAMN06622185	GCA_002257465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/465/GCA_002257465.1_ASM225746v1	-	-
Halobacterium hubeiense	1407499	PRJEB8631	319516	Euryarchaeota	Halobacteria	3.23827	66.4	-	CEMZ01	11	3387	3191	4/24/16	7/28/17	Scaffold	UH	SAMEA3268811	GCA_900004275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/004/275/GCA_900004275.1_ASM90000427v1	-	JI20-8
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.85165	66.8	-	LOXN01	56	6337	6052	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449269	GCA_001524485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/485/GCA_001524485.1_ASM152448v1	-	MSMB0579
Burkholderia diffusa	488732	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.84272	66.5	-	LOZQ01	69	6328	5993	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449326	GCA_001527605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/605/GCA_001527605.1_ASM152760v1	-	MSMB1544
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.89282	67.5	-	LOYZ01	86	7219	6859	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449309	GCA_001527265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/265/GCA_001527265.1_ASM152726v1	-	MSMB2051
Burkholderia pseudomultivorans	1207504	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.62188	67.6	-	LPJX01	79	6947	6678	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449603	GCA_001532065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/065/GCA_001532065.1_ASM153206v1	-	MSMB574WGS
Burkholderia anthina	179879	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.42838	67.1	-	LPFR01	78	6922	6552	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449491	GCA_001530695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/695/GCA_001530695.1_ASM153069v1	-	MSMB1506WGS
Candidatus Kryptonium thompsoni	1633631	PRJEB11713	301862	FCB group	Candidatus Kryptonia	2.44641	37.4	-	CZVL01	87	2298	2120	11/11/15	4/11/17	Scaffold	DOE - Joint Genome Institute	SAMN03435914	GCA_001536145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/145/GCA_001536145.1_JGI_assembly	-	JGI-7
Porphyrobacter donghaensis	267135	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	4.0942	66.6	-	LSJZ01	400	4025	3728	2/10/16	4/4/17	Contig	Georgia Institute of Technology	SAMN04299476	GCA_001556895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/895/GCA_001556895.1_ASM155689v1	-	CCH6-A1
Enterobacter cloacae complex 'Hoffmann cluster IV'	1812935	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.25952	55.2	-	LJEO02	229	5224	4876	10/15/15	4/20/17	Contig	University of KwaZulu Natal	SAMN04011448	GCA_001317055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/055/GCA_001317055.2_ASM131705v2	-	ST433:953102574
Enterobacter cloacae 'Hoffmann cluster III' MGH 13	1329822	PRJNA201928	201928	Proteobacteria	Gammaproteobacteria	4.78906	54.9	-	JCLL01	8	4664	4380	2/3/14	4/2/17	Scaffold	Broad Institute	SAMN02138553	GCA_000534575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/575/GCA_000534575.1_Ente_cloa_complex_MGH_13_V2	-	MGH 13
Polynucleobacter sp. VK13	1938817	PRJEB20342	382092	Proteobacteria	Betaproteobacteria	2.91124	41	-	FWXJ01	37	2757	2678	4/8/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06296008	GCA_900176405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/405/GCA_900176405.1_IMG-taxon_2708742530_annotated_assembly	-	VK13
Nitrosopelagicus sp. REDSEA-S32_B2	1811587	PRJNA289734	289734	TACK group	Thaumarchaeota	0.449408	33.9	-	LUPC01	55	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534604	GCA_001627165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/165/GCA_001627165.1_ASM162716v1	27377622	-
Hydrotalea flava	714549	PRJEB14091	329620	FCB group	Bacteroidetes/Chlorobi group	0.710749	36.5	-	FLNO01	68	-	-	7/19/16	7/19/16	Contig	FIOCRUZ-MG	SAMEA4028675	GCA_900089535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/535/GCA_900089535.1_A04	-	-
Oleiphilus sp. HI0125	1822266	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	4.55383	44.5	-	LWGF01	1531	4370	3827	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580805	GCA_001635355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/355/GCA_001635355.1_ASM163535v1	-	HI0125
Thalassolituus sp. UBA1087	1947651	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.1689	53.2	-	DCCG01	46	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452228	GCA_002314145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/145/GCA_002314145.1_ASM231414v1	28894102	-
Polynucleobacter asymbioticus	576611	PRJNA266917	266917	Proteobacteria	Betaproteobacteria	2.13888	44.8	-	LVLE01	29	2152	2090	11/7/16	4/5/17	Contig	University of Innsbruck	SAMN04575155	GCA_001870325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/325/GCA_001870325.1_ASM187032v1	-	MWH-Recht1
Eikenella sp. NML070372	1795829	PRJNA310649	310649	Proteobacteria	Betaproteobacteria	1.93545	55.6	-	LXSN01	13	1922	1734	5/19/16	4/12/17	Contig	Public Health Agency of Canada	SAMN04931638	GCA_001648415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/415/GCA_001648415.1_ASM164841v1	-	NML070372
Mycobacterium malmoense	1780	PRJNA352326	352326	Terrabacteria group	Actinobacteria	5.66547	66.8	-	MOWS01	239	5357	5043	11/7/16	4/16/17	Contig	Central Tuberculosis Research Institute	SAMN05969904	GCA_001870845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/845/GCA_001870845.1_ASM187084v1	-	CTRI-256
Lachnoclostridium sp. An138	1965560	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.6897	50.4	-	NFLF01	62	3550	3401	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473610	GCA_002160765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/765/GCA_002160765.1_ASM216076v1	-	An138
Gilliamella sp. A7	1970465	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.71045	34.2	-	NASN01	125	2464	2361	5/16/17	5/24/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603538	GCA_002142015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/015/GCA_002142015.1_ASM214201v1	-	A7
Bacillus wiedmannii	1890302	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.38032	35.2	-	LXFQ01	90	5728	5410	5/17/16	4/5/17	Contig	Cornell University	SAMN04909728	GCA_001645465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/465/GCA_001645465.1_ASM164546v1	-	FSL M7-1251
Flavonifractor sp. An112	1965544	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.95895	59.3	-	NFLU01	42	2854	2713	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473584	GCA_002161085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/085/GCA_002161085.1_ASM216108v1	-	An112
Eisenbergiella tayi	1432052	PRJNA335591	335591	Terrabacteria group	Firmicutes	7.51684	46.6	-	MCGI01	11	6539	6359	8/30/16	4/5/17	Scaffold	Public Health Agency of Canada	SAMN05449643	GCA_001717125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/125/GCA_001717125.1_ASM171712v1	-	NML 120489
Thiobacillus sp. SCN 63-57	1660145	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	2.95759	63	-	MEGP01	59	2914	2768	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652519	GCA_001725555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/555/GCA_001725555.1_ASM172555v1	26031303	-
Halanaerobium congolense	54121	PRJEB17049	351181	Terrabacteria group	Firmicutes	2.92797	33	-	FOHG01	83	2885	2697	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04515652	GCA_900111705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/705/GCA_900111705.1_IMG-taxon_2642422592_annotated_assembly	-	WG5
Bradyrhizobium canariense	255045	PRJNA355578	355578	Proteobacteria	Alphaproteobacteria	8.27461	63	-	NAFI01	190	7844	7365	4/24/17	8/7/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN06077197	GCA_002108775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/775/GCA_002108775.1_ASM210877v1	28729275	UBMA195
Terribacillus saccharophilus	361277	PRJNA395369	395369	Terrabacteria group	Firmicutes	3.59514	42.8	-	NPBK01	42	3639	3548	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372682	GCA_002272685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/685/GCA_002272685.1_assembly-7517-W_v1	-	7517-W
Aminobacterium sp. UBA1031	1946021	PRJNA348753	348753	Synergistetes	Synergistia	1.98308	43.6	-	DCEK01	21	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06457779	GCA_002316915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/915/GCA_002316915.1_ASM231691v1	28894102	-
Fibrobacter sp. UWB3	1964357	PRJNA376435	376435	FCB group	Fibrobacteres	3.57082	48.4	-	MWQJ01	20	2914	2793	6/28/17	6/30/17	Contig	University of Wisconsin - Madison	SAMN06392818	GCA_002210405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/210/405/GCA_002210405.1_ASM221040v1	-	UWB3
Ktedonobacter sp. 13_1_20CM_3_54_15	1805224	PRJNA297196	297196	Terrabacteria group	Chloroflexi	3.13733	53.7	-	MNJJ01	259	2831	2519	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327752	GCA_001920235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/235/GCA_001920235.1_ASM192023v1	27843720	-
Aequorivita sp. UBA1901	1947771	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.25292	38.6	-	DDGN01	22	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06450550	GCA_002352865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/865/GCA_002352865.1_ASM235286v1	28894102	-
Archaeoglobus sp. JdFR-33	1934990	PRJNA269163	269163	Euryarchaeota	Archaeoglobi	0.478535	40	-	MTMU01	89	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226350	GCA_002010205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/205/GCA_002010205.1_ASM201020v1	28350381	-
Campylobacter pinnipediorum subsp. pinnipediorum	1660067	PRJNA338062	338062	Proteobacteria	delta/epsilon subdivisions	1.62279	30.2	-	MDCT01	58	1602	1512	9/18/16	5/30/17	Contig	"USDA, ARS, WRRC"	SAMN05514158	GCA_001730545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/545/GCA_001730545.1_ASM173054v1	-	RM18812
Elizabethkingia endophytica	1606016	PRJEB13258	317808	FCB group	Bacteroidetes/Chlorobi group	4.15169	35.4	-	FLSU01	60	3788	3656	6/30/16	7/29/17	Contig	JUSTUS LIEBIG UNIVERSITY	SAMEA4051572	GCA_900092085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/085/GCA_900092085.1_ASM90009208v1	-	-
Demequina sp. NBRC 110056	1570345	PRJDB3263	276645	Terrabacteria group	Actinobacteria	2.93779	71.1	-	BBRM01	10	2691	2614	4/1/17	4/17/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00022846	GCA_002090155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/155/GCA_002090155.1_ASM209015v1	-	NBRC 110056
Xanthomonas axonopodis pv. manihotis str. IBSBF 321	1185694	PRJNA163783	163783	Proteobacteria	Gammaproteobacteria	4.59306	64.9	-	AKDZ01	888	4491	3559	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090330	GCA_000265665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/665/GCA_000265665.1_IBSBF321	22699502	IBSBF 321
Listeria sp. ILCC801	1649188	PRJEB9225	390501	Terrabacteria group	Firmicutes	2.75139	40.5	-	FYBS01	22	2770	2665	6/15/17	7/5/17	Contig	JUSTUS LIEBIG UNIVERSITY	SAMEA104121264	GCA_900186185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/185/GCA_900186185.1_ILCC797.fasta	-	-
Catabacter sp. UBA762	1946297	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.37126	49.2	-	DBKA01	135	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452391	GCA_002297805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/805/GCA_002297805.1_ASM229780v1	28894102	-
Candidatus Microthrix sp. UBA831	1946220	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.89844	52.3	-	DBHJ01	175	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455826	GCA_002296165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/165/GCA_002296165.1_ASM229616v1	28894102	-
Faecalitalea sp. UBA4323	1946518	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.69555	37.9	-	DGTZ01	108	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453637	GCA_002393795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/795/GCA_002393795.1_ASM239379v1	28894102	-
Empedobacter sp. UBA2044	1946432	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.03902	31.6	-	DDBA01	80	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456973	GCA_002333005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/005/GCA_002333005.1_ASM233300v1	28894102	-
Mageeibacillus sp. UBA1193	1946779	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.28943	49.5	-	DBYF01	148	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06456574	GCA_002310155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/155/GCA_002310155.1_ASM231015v1	28894102	-
Hungatella sp. UBA4568	1946597	PRJNA348753	348753	Terrabacteria group	Firmicutes	4.75998	43.2	-	DGKO01	66	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455501	GCA_002387015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/015/GCA_002387015.1_ASM238701v1	28894102	-
Alphaproteobacteria bacterium	1913988	PRJNA391950	391950	Proteobacteria	Alphaproteobacteria	2.5547	46.9	-	NVVM01	116	2512	2197	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568877	GCA_002402225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/402/225/GCA_002402225.1_ASM240222v1	-	-
Gammaproteobacteria bacterium	1913989	PRJNA391950	391950	Proteobacteria	Gammaproteobacteria	2.94632	36.6	-	NVTT01	112	2741	2554	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568922	GCA_002401655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/655/GCA_002401655.1_ASM240165v1	-	-
Gammaproteobacteria bacterium	1913989	PRJNA391950	391950	Proteobacteria	Gammaproteobacteria	2.4043	39.8	-	NVVP01	85	2360	2229	9/28/17	9/28/17	Contig	University of Southern California	SAMN07568874	GCA_002402245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/402/245/GCA_002402245.1_ASM240224v1	-	-
Hungatella sp. UBA4396	1946596	PRJNA348753	348753	Terrabacteria group	Firmicutes	4.50095	44.9	-	DGRE01	71	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450376	GCA_002389905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/905/GCA_002389905.1_ASM238990v1	28894102	-
Mageeibacillus sp. UBA1046	1946778	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.64512	45.4	-	DCDV01	31	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456014	GCA_002316595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/595/GCA_002316595.1_ASM231659v1	28894102	-
Faecalitalea sp. UBA4312	1946517	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.7782	42.3	-	DGUK01	109	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453089	GCA_002394635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/635/GCA_002394635.1_ASM239463v1	28894102	-
Oblitimonas sp. UBA4037	1947004	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.97832	48.6	-	DGAF01	68	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455027	GCA_002382315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/315/GCA_002382315.1_ASM238231v1	28894102	-
Candidatus Microthrix sp. UBA814	1946218	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.45817	52.6	-	DBIA01	37	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456111	GCA_002296525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/525/GCA_002296525.1_ASM229652v1	28894102	-
Catabacter sp. UBA773	1946302	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.48902	46.9	-	DBJP01	103	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456213	GCA_002298355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/355/GCA_002298355.1_ASM229835v1	28894102	-
Listeria sp. ILCC801	1649188	PRJEB9225	390501	Terrabacteria group	Firmicutes	2.8081	40.4	-	FYBP01	22	2837	2729	6/15/17	7/5/17	Contig	JUSTUS LIEBIG UNIVERSITY	SAMEA104121268	GCA_900186195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/195/GCA_900186195.1_ILCC810.fasta	-	-
Xanthomonas axonopodis pv. manihotis str. IBSBF 436	1185696	PRJNA163787	163787	Proteobacteria	Gammaproteobacteria	4.90333	65.1	-	AKEB01	149	4353	4034	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090332	GCA_000265685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/685/GCA_000265685.1_IBSBF436	22699502	IBSBF 436
Campylobacter pinnipediorum subsp. pinnipediorum	1660067	PRJNA338063	338063	Proteobacteria	delta/epsilon subdivisions	1.61654	30.2	-	MDCU01	85	1593	1487	9/18/16	5/30/17	Contig	"USDA, ARS, WRRC"	SAMN05514159	GCA_001730585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/585/GCA_001730585.1_ASM173058v1	-	RM18813
Archaeoglobus sp. JdFR-37	1934994	PRJNA269163	269163	Euryarchaeota	Archaeoglobi	1.9724	44.8	-	MTMY01	52	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226354	GCA_002010215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/215/GCA_002010215.1_ASM201021v1	28350381	-
Fibrobacter sp. UWB2	1964358	PRJNA376435	376435	FCB group	Fibrobacteres	3.52839	48.8	-	MWQK01	15	2946	2830	6/28/17	6/30/17	Contig	University of Wisconsin - Madison	SAMN06392817	GCA_002210425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/210/425/GCA_002210425.1_ASM221042v1	-	UWB2
Aminobacterium sp. UBA4987	1946027	PRJNA348753	348753	Synergistetes	Synergistia	1.97159	45.2	-	DGZF01	14	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450883	GCA_002396985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/985/GCA_002396985.1_ASM239698v1	28894102	-
Terribacillus saccharophilus	361277	PRJNA395369	395369	Terrabacteria group	Firmicutes	3.54347	43	-	NPBE01	631	3618	3377	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372674	GCA_002272735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/735/GCA_002272735.1_assembly-7504-1_v1	-	7504-1
Bradyrhizobium canariense	255045	PRJNA355285	355285	Proteobacteria	Alphaproteobacteria	8.37641	63	-	NAFK01	178	8012	7465	4/24/17	8/7/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN06067958	GCA_002108805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/805/GCA_002108805.1_ASM210880v1	28729275	UBMAN05
Halanaerobium congolense	54121	PRJEB17307	351522	Terrabacteria group	Firmicutes	2.92975	33	-	FOWY01	91	2884	2692	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488596	GCA_900115575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/575/GCA_900115575.1_IMG-taxon_2642422549_annotated_assembly	-	WG1
Thiobacillus sp. GWE1_62_9	1802374	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	2.54818	63.3	-	MIDJ01	212	2667	2071	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313892	GCA_001831015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/015/GCA_001831015.1_ASM183101v1	27774985	-
Eisenbergiella tayi	1432052	PRJNA350545	350545	Terrabacteria group	Firmicutes	7.55502	46.8	-	MPDJ01	23	6588	6409	11/17/16	4/5/17	Scaffold	Public Health Agency of Canada	SAMN05941924	GCA_001881565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/565/GCA_001881565.1_ASM188156v1	-	DSM 26961
Flavonifractor sp. An100	1965538	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.04014	57.2	-	NFMA01	66	2946	2802	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473571	GCA_002161175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/175/GCA_002161175.1_ASM216117v1	-	An100
Bacillus wiedmannii	1890302	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.61756	35.1	-	LXFN01	57	5882	5531	5/17/16	4/5/17	Contig	Cornell University	SAMN04909725	GCA_001645505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/505/GCA_001645505.1_ASM164550v1	-	FSL J3-0113
Lachnospira sp. UBA3852	1946719	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.89261	39.7	-	DGHI01	29	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453616	GCA_002392595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/595/GCA_002392595.1_ASM239259v1	28894102	-
Gilliamella sp. A-TSA1	1970466	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.46744	34.8	-	NASO01	79	2243	2162	5/16/17	5/24/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603539	GCA_002142035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/035/GCA_002142035.1_ASM214203v1	-	A-TSA1
Lachnoclostridium sp. An131	1965555	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.51355	50.9	-	NFLI01	46	3340	3205	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473605	GCA_002160825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/825/GCA_002160825.1_ASM216082v1	-	An131
Eikenella sp. NML080894	1795830	PRJNA310649	310649	Proteobacteria	Betaproteobacteria	1.94089	55.6	-	LXSO01	14	1973	1795	5/19/16	4/12/17	Contig	Public Health Agency of Canada	SAMN04931639	GCA_001648425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/425/GCA_001648425.1_ASM164842v1	-	NML080894
Polynucleobacter asymbioticus	576611	PRJNA266917	266917	Proteobacteria	Betaproteobacteria	2.2279	44.8	-	LVLF01	14	2241	2175	11/7/16	4/5/17	Contig	University of Innsbruck	SAMN04575157	GCA_001870335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/335/GCA_001870335.1_ASM187033v1	-	MWH-Tro7-1-4
Thalassolituus sp. UBA1670	1947655	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.16422	54.8	-	DCKQ01	312	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454214	GCA_002320395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/395/GCA_002320395.1_ASM232039v1	28894102	-
Oleiphilus sp. HI0128	1822267	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	4.88591	44.4	-	LWGG01	1636	4534	3940	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580806	GCA_001635365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/365/GCA_001635365.1_ASM163536v1	-	HI0128
Nitrosopelagicus sp. REDSEA-S31_B2	1811586	PRJNA289734	289734	TACK group	Thaumarchaeota	1.00913	34	-	LUPB01	86	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534603	GCA_001627235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/235/GCA_001627235.1_ASM162723v1	27377622	-
Polynucleobacter sp. MWH-VicM1	1938815	PRJEB21377	391624	Proteobacteria	Betaproteobacteria	1.62664	43.1	-	FYEX01	3	1666	1621	6/25/17	7/5/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06295916	GCA_900187875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/875/GCA_900187875.1_IMG-taxon_2710264786_annotated_assembly	-	MWH-VicM1
Enterobacter cloacae complex 'Hoffmann cluster III'	1812934	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	4.9892	54.8	-	LJDP02	143	4999	4658	10/15/15	4/5/17	Contig	University of KwaZulu Natal	SAMN04011424	GCA_001316815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/815/GCA_001316815.2_ASM131681v2	-	ST145:950180354
Enterobacter cloacae complex 'Hoffmann cluster IV'	1812935	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.04085	55.6	-	LVUK01	215	5035	4653	4/25/16	4/20/17	Contig	JCVI	SAMN04578343	GCA_001631035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/035/GCA_001631035.1_ASM163103v1	-	GN05647
Porphyrobacter donghaensis	267135	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	4.22537	66.4	-	LSJQ01	627	4183	3787	2/10/16	4/4/17	Contig	Georgia Institute of Technology	SAMN04299467	GCA_001557305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/305/GCA_001557305.1_ASM155730v1	-	CCH8-A2
Candidatus Kryptonium thompsoni	1633631	PRJEB11716	301865	FCB group	Candidatus Kryptonia	1.97208	37.4	-	CZVM01	152	1912	1702	11/11/15	4/11/17	Scaffold	DOE - Joint Genome Institute	SAMN03436091	GCA_001536205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/205/GCA_001536205.1_JGI_assembly	-	JGI-15
Burkholderia anthina	179879	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.27438	67.1	-	LPKM01	74	6763	6402	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449619	GCA_001532915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/915/GCA_001532915.1_ASM153291v1	-	MSMB649WGS
Burkholderia pseudomultivorans	1207504	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.66749	67.4	-	LPJO01	62	7044	6770	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449593	GCA_001532085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/085/GCA_001532085.1_ASM153208v1	-	MSMB2199WGS
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.00943	67.5	-	LOZA01	69	6455	6133	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449310	GCA_001527285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/285/GCA_001527285.1_ASM152728v1	-	MSMB2052
Burkholderia diffusa	488732	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.91615	66.4	-	LPJU01	66	6382	6085	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449599	GCA_001531975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/975/GCA_001531975.1_ASM153197v1	-	MSMB377WGS
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.66651	66.9	-	LOYL01	77	6076	5817	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449295	GCA_001526285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/285/GCA_001526285.1_ASM152628v1	-	MSMB1821
Halobacterium hubeiense	1407499	PRJEB8631	319516	Euryarchaeota	Halobacteria	3.23365	66.4	-	CEMR01	15	3388	3198	4/24/16	7/28/17	Scaffold	UH	SAMEA3268808	GCA_900005775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/005/775/GCA_900005775.1_ASM90000577v1	-	JI20-5
Halothiobacillus sp. 28-55-5	1970386	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	1.67812	54.6	-	NCFX01	575	1901	1776	8/16/17	8/16/17	Scaffold	None	SAMN06622309	GCA_002278835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/835/GCA_002278835.1_ASM227883v1	-	-
Enterobacter xiangfangensis	1296536	PRJNA278421	278421	Proteobacteria	Gammaproteobacteria	4.73676	55.5	-	LDQM01	38	4543	4361	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401391	GCA_001476005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/005/GCA_001476005.1_ASM147600v1	26793183	NS28
Legionella spiritensis	452	PRJEB6403	251923	Proteobacteria	Gammaproteobacteria	3.34807	45.4	chromosome 1:NZ_LT906457.1/LT906457.1	-	1	3051	2947	8/15/17	8/28/17	Complete Genome	SC	SAMEA4412668	GCA_900186965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/965/GCA_900186965.1_50592_C01	-	NCTC11990
Enterobacter kobei	208224	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.74949	55	-	LEEC01	30	4600	4424	6/9/15	4/3/17	Contig	JCVI	SAMN03732700	GCA_001022355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/355/GCA_001022355.1_ASM102235v1	-	GN02366
Nitrospira sp. SG-bin2	1827377	PRJNA315256	315256	Nitrospirae	Nitrospira	3.65902	56.8	-	LVWT01	63	3652	3502	4/10/17	4/24/17	Scaffold	The University Hong Kong	SAMN04592277	GCA_002083405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/405/GCA_002083405.1_ASM208340v1	28390307	-
Candidatus Kryptobacter tengchongensis	1643429	PRJEB11723	301872	FCB group	Candidatus Kryptonia	0.527169	36.4	-	CZVR01	64	562	545	11/11/15	11/11/15	Scaffold	DOE - Joint Genome Institute	SAMN03436134	GCA_001458515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/515/GCA_001458515.1_JGI_assembly	-	JGI-22
Bacillus paralicheniformis	1648923	PRJNA342746	342746	Terrabacteria group	Firmicutes	4.31758	46	-	MIZE01	37	4426	4172	1/9/17	4/6/17	Contig	Agricultural Research Organisation - volcani center - Israel	SAMN05767741	GCA_001939545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/545/GCA_001939545.1_ASM193954v1	-	167/2
Lactobacillus aviarius	1606	PRJNA316009	316009	Terrabacteria group	Firmicutes	1.63336	40.2	-	LVKD01	70	1557	1475	5/25/16	4/5/17	Scaffold	University of Minnesota	SAMN04573022	GCA_001652045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/045/GCA_001652045.1_ASM165204v1	-	UMNLAv2
Lactobacillus taiwanensis	508451	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.18337	34	-	NGOB01	126	2124	1909	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848429	GCA_002253145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/145/GCA_002253145.1_ASM225314v1	-	601b
Lactobacillus parabuchneri	152331	PRJNA357007	357007	Terrabacteria group	Firmicutes	2.66501	43.5	-	MSBE01	61	2577	2394	4/18/17	4/21/17	Contig	University of Bern	SAMN06130985	GCA_002095755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/755/GCA_002095755.1_ASM209575v1	28261177	FAM21835
Phenylobacterium sp. SCN 69-14	1660128	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	2.68539	69.2	-	MEEW01	245	2759	2493	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652472	GCA_001724985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/985/GCA_001724985.1_ASM172498v1	26031303	-
Aureimonas sp. AU22	1638162	PRJDB3816	300645	Proteobacteria	Alphaproteobacteria	4.63075	67.7	-	BBWJ01	89	4357	4198	11/7/15	4/11/17	Contig	"Graduate School of Life Sciences, Tohoku University"	SAMD00028757	GCA_001463745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/745/GCA_001463745.1_ASM146374v1	26534993	AU22
Kocuria kristinae	37923	PRJNA278412	278412	Terrabacteria group	Actinobacteria	2.25157	71.8	-	LDRH01	233	2056	1867	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401336	GCA_001476995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/995/GCA_001476995.1_ASM147699v1	26793183	SA13
Duganella sp. OV510	1881039	PRJEB15982	348279	Proteobacteria	Betaproteobacteria	6.42875	62.2	-	FNEQ01	28	5820	5669	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05428973	GCA_900100205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/205/GCA_900100205.1_IMG-taxon_2684623000_annotated_assembly	-	OV510
Vibrio parahaemolyticus	670	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.17306	45.4	chromosome 1:NZ_CP020427.1/CP020427.1; chromosome 2:NZ_CP020428.1/CP020428.1	-	2	4964	4624	3/29/17	4/1/17	Complete Genome	US Food and Drug Administration 	SAMN04875528	GCA_002073775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/775/GCA_002073775.1_ASM207377v1	-	FDAARGOS_191
Desulfotomaculum ferrireducens	1833852	PRJNA371691	371691	Terrabacteria group	Firmicutes	3.24018	45.4	chromosome:NZ_CP019698.1/CP019698.1	-	1	3175	3006	2/21/17	2/23/17	Complete Genome	Guangdong Institute of Eco-Environmental Science & Technology	SAMN06311225	GCA_002005145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/145/GCA_002005145.1_ASM200514v1	27153808	GSS09
Lactobacillus agilis	1601	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.18971	41.3	-	LUGD01	121	2233	2018	8/1/17	8/3/17	Scaffold	University of Minnesota	SAMN04498968	GCA_002237865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/865/GCA_002237865.1_ASM223786v1	-	UMNLA4
Mycobacterium conceptionense	451644	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.6347	66.4	-	MBGE01	310	6448	6158	1/18/17	4/6/17	Contig	JCVI	SAMN04634279	GCA_001954125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/125/GCA_001954125.1_ASM195412v1	-	GA-1041
Lactobacillus acetotolerans	1600	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.24891	35.1	-	DCEM01	124	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06455215	GCA_002316965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/965/GCA_002316965.1_ASM231696v1	28894102	-
Klebsiella quasipneumoniae	1463165	PRJNA325191	325191	Proteobacteria	Gammaproteobacteria	5.34587	57.8	-	MBSL01	83	5320	4897	9/16/16	2/21/17	Scaffold	Christian Medical College	SAMN05225354	GCA_001729665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/665/GCA_001729665.1_ASM172966v1	-	B8095
Staphylococcus argenteus	985002	PRJEB6393	256290	Terrabacteria group	Firmicutes	2.73502	32.3	-	CCEM01	11	2707	2544	9/6/14	4/2/17	Contig	WTSI	SAMEA2007935	GCA_000752055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/055/GCA_000752055.1_Sa_LBSA043	-	-
Vulcanisaeta sp. CIS_19	1714251	PRJNA295311	295311	TACK group	Crenarchaeota	1.3731	45.8	-	LOCG01	136	1571	1146	1/15/16	1/15/16	Scaffold	Montana State University	SAMN04045673	GCA_001516745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/745/GCA_001516745.1_ASM151674v1	-	-
Moritella viscosa	80854	PRJEB16014	348508	Proteobacteria	Gammaproteobacteria	5.22771	39.3	-	FPLJ01	155	4757	4462	11/24/16	4/11/17	Contig	UNIVERSITY OF TROMSO	SAMEA4520411	GCA_900120075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/075/GCA_900120075.1_clc.v6.5.MT2528.01	-	-
Photobacterium kishitanii	318456	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	5.09896	38.7	-	LZFD01	88	4650	4243	6/24/16	4/5/17	Contig	FDA/CFSAN	SAMN04507563	GCA_001676235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/235/GCA_001676235.1_ASM167623v1	-	GCSL-P50
Mycobacterium immunogenum	83262	PRJNA294421	294421	Terrabacteria group	Actinobacteria	5.68279	64.1	-	LJFX01	52	5685	5517	9/22/15	4/4/17	Contig	US EPA	SAMN04025501	GCA_001296335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/335/GCA_001296335.1_ASM129633v1	26744376	HXV
Frigoribacterium sp. RIT-PI-h	1690245	PRJNA290678	290678	Terrabacteria group	Actinobacteria	3.44535	71.1	-	LHOZ01	134	3283	3077	9/22/15	4/11/17	Contig	Monash University Malaysia	SAMN03894455	GCA_001297205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/205/GCA_001297205.1_ASM129720v1	26586879	RIT-PI-h
Enterobacter ludwigii	299767	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.00346	54.4	-	LRCI01	167	5039	4651	1/19/16	4/4/17	Contig	JCVI	SAMN04407776	GCA_001518205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/205/GCA_001518205.1_ASM151820v1	-	GN03638
Fusobacterium hwasookii ChDC F300	1307444	PRJNA193585	193585	Fusobacteria	Fusobacteriia	2.44115	27	-	ATKG01	148	2454	2279	8/29/13	4/1/17	Contig	Dental School of Chosun University	SAMN02469577	GCA_000455925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/925/GCA_000455925.1_de_novo	24459284	ChDC F300
Leisingera sp. ANG-S3	1577899	PRJNA269051	269051	Proteobacteria	Alphaproteobacteria	4.59652	62.8	-	JWLF01	70	4378	4258	1/2/15	4/10/17	Scaffold	University of Connecticut	SAMN03246062	GCA_000813945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/945/GCA_000813945.1_ASM81394v1	25755651	ANG-S3
Clostridium baratii	1561	PRJNA315217	315217	Terrabacteria group	Firmicutes	3.05635	28	-	LUSO01	25	2954	2820	3/14/17	3/16/17	Scaffold	Institut Pasteur	SAMN04553941	GCA_002025805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/805/GCA_002025805.1_ASM202580v1	-	796-15
Citrobacter braakii	57706	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.91	52.2	-	JWAG01	101	4750	4584	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197132	GCA_001062165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/165/GCA_001062165.1_ASM106216v1	26230489	1175_SENT
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.38347	51.1	-	MPQT01	79	2338	2241	3/6/17	3/9/17	Contig	Harvard University	SAMN06016266	GCA_002020685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/685/GCA_002020685.1_ASM202068v1	-	-
Bacillus aryabhattai	412384	PRJNA374936	374936	Terrabacteria group	Firmicutes	4.59928	38.5	-	MVJH01	352	4788	4562	6/5/17	6/16/17	Contig	"MGU, Nalgonda"	SAMN06339755	GCA_002167185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/185/GCA_002167185.1_ASM216718v1	-	B14
Elizabethkingia miricola	172045	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	4.36583	36	-	MAHK01	19	4073	3967	3/8/17	3/11/17	Contig	CDC	SAMN05256599	GCA_002023575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/575/GCA_002023575.1_ASM202357v1	-	CSID_3000516998
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	6.72085	43.6	-	MPTC01	94	5951	5766	1/18/17	4/6/17	Contig	Cornell University	SAMN05772540	GCA_001954425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/425/GCA_001954425.1_ASM195442v1	-	FSL H7-0710
Achromobacter sp. HMSC057D05	1739526	PRJNA300177	300177	Proteobacteria	Betaproteobacteria	6.48169	67.6	-	LTSZ01	92	6001	5751	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480442	GCA_001815425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/425/GCA_001815425.1_ASM181542v1	-	HMSC057D05
Klebsiella michiganensis	1134687	PRJNA52137	52137	Proteobacteria	Gammaproteobacteria	5.79434	55.7	-	AGDI01	6	5621	5329	2/17/12	2/21/17	Scaffold	Broad Institute	SAMN02463893	GCA_000247835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/835/GCA_000247835.1_Kleb_oxyt_10-5242_V1	-	Oct-42
Sulfuricurvum sp. RIFCSPLOWO2_02_FULL_43_45	1802245	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.43577	43.3	-	MIBR01	131	1526	1387	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316048	GCA_001830685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/685/GCA_001830685.1_ASM183068v1	27774985	-
Luteibacter sp. UNCMF366Tsu5.1	1502758	PRJEB17765	353203	Proteobacteria	Gammaproteobacteria	4.18297	64.8	-	FPIS01	16	3618	3536	11/12/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02800691	GCA_900119235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/235/GCA_900119235.1_IMG-taxon_2593339238_annotated_assembly	-	UNCMF366Tsu5.1
Vibrio metoecus	1481663	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	4.04011	46.9	-	NMSQ01	134	3891	3677	8/31/17	9/2/17	Contig	University of Alberta	SAMN07350492	GCA_002283955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/955/GCA_002283955.1_ASM228395v1	-	OYP8G05
Streptomyces albidoflavus	1886	PRJEB18273	384155	Terrabacteria group	Actinobacteria	7.00441	73.3	-	FWFA01	334	6215	5860	4/25/17	5/1/17	Scaffold	Jessy	SAMEA100366918	GCA_900171555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/555/GCA_900171555.1_Salb	-	R-53649
Hymenobacter sp. MIMBbqt21	1770526	PRJNA362974	362974	FCB group	Bacteroidetes/Chlorobi group	7.29386	55.1	-	MTSE01	154	5822	5664	5/22/17	5/24/17	Contig	Inner Mongolia Agricultural University	SAMN06251501	GCA_002154225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/225/GCA_002154225.1_ASM215422v1	-	MIMBbqt21
Bosea sp. Root483D1	1736544	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	6.60953	66.4	-	LMJW01	23	6290	6087	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155813	GCA_001429505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/505/GCA_001429505.1_Root483D1	26633631	Root483D1
Devosia sp. Root685	1736587	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	4.39763	61.5	-	LMHK01	5	4131	4048	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155856	GCA_001427875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/875/GCA_001427875.1_Root685	26633631	Root685
Lactobacillus kunkeei	148814	PRJNA257367	257367	Terrabacteria group	Firmicutes	1.5814	36.8	-	JPUI01	44	1557	1426	8/19/14	4/2/17	Contig	Universidad Mayor	SAMN02950967	GCA_000741865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/865/GCA_000741865.1_LkMP2v1.0	25301653	MP2
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.09515	42.2	-	FTQA01	2	985	917	3/18/17	3/24/17	Contig	Functional Genomics Genter Zurich	SAMEA4555941	GCA_900149415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/415/GCA_900149415.1_30-22b	-	-
[Bacillus] sp. KCTC 13219	1811976	PRJNA314540	314540	Terrabacteria group	Firmicutes	3.85306	38.3	-	LUFJ01	37	3764	3630	3/16/16	4/18/17	Scaffold	KRIBB	SAMN04538164	GCA_001592865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/865/GCA_001592865.1_KCTC_13210_a5	27174273	KCTC 13219
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.84333	35.2	-	LZGV01	117	2721	2525	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179619	GCA_001690265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/265/GCA_001690265.1_ASM169026v1	-	HK2
Candidatus Accumulibacter sp. BA-94	1454005	PRJNA236440	236440	Proteobacteria	Betaproteobacteria	3.09733	64.3	-	JEMZ01	299	3144	3127	3/3/14	3/3/14	Scaffold	Australian Centre for Ecogenomics	SAMN02445066	GCA_000585095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/095/GCA_000585095.1_capba94	-	-
Actinobacteria bacterium IMCC19121	1848754	PRJNA321006	321006	Terrabacteria group	Actinobacteria	1.50642	45.4	chromosome:NZ_CP015605.1/CP015605.1	-	1	1528	1476	2/16/17	9/8/17	Complete Genome	Inha University	SAMN04961845	GCA_002284895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/895/GCA_002284895.1_ASM228489v1	28186143	IMCC19121
Staphylococcus cohnii	29382	PRJNA263228	263228	Terrabacteria group	Firmicutes	2.58089	32.3	-	JRVU01	106	2481	2353	11/10/16	4/5/17	Contig	CSIR-Institute of Microbial Technology	SAMN03097237	GCA_001876725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/725/GCA_001876725.1_ASM187672v1	-	SE3.10
Candidatus Synechococcus spongiarum LMB bulk10E	1449122	PRJNA235068	235068	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.455454	59.6	-	MWLF01	50	476	427	3/3/17	3/3/17	Scaffold	DOE Joint Genome Institute	SAMN02745393	GCA_002017955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/955/GCA_002017955.1_ASM201795v1	-	-
Salinivibrio sp. IB282	1766122	PRJNA368693	368693	Proteobacteria	Gammaproteobacteria	3.22619	50.7	-	MUET01	157	3059	2831	2/14/17	4/17/17	Contig	Universidad de Sevilla	SAMN06270194	GCA_001995685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/685/GCA_001995685.1_ASM199568v1	-	IB282
Pandoraea pnomenusa	93220	PRJNA266765	266765	Proteobacteria	Betaproteobacteria	5.57485	62.8	-	JTCS01	66	4922	4790	12/24/14	4/2/17	Contig	University of Malaya	SAMN03174414	GCA_000807785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/785/GCA_000807785.1_ASM80778v1	25657265	7641
Smithella sp. UBA2180	1961382	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	1.74877	42.4	-	DCVU01	189	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452574	GCA_002327415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/415/GCA_002327415.1_ASM232741v1	28894102	-
Pseudobutyrivibrio sp. ACV-2	1520801	PRJEB16656	349907	Terrabacteria group	Firmicutes	3.66032	38.5	-	FNQZ01	45	3363	3188	10/22/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910384	GCA_900107545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/545/GCA_900107545.1_IMG-taxon_2593339240_annotated_assembly	-	ACV-2
Pantoea dispersa	59814	PRJNA278246	278246	Proteobacteria	Gammaproteobacteria	4.80103	57.6	-	LDSA01	123	4463	4287	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401411	GCA_001477155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/155/GCA_001477155.1_ASM147715v1	26793183	NS380
Clostridium saccharobutylicum	169679	PRJNA322801	322801	Terrabacteria group	Firmicutes	4.90033	28.5	-	LZZA01	142	4298	4065	2/23/17	2/25/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05170522	GCA_002006255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/255/GCA_002006255.1_ASM200625v1	-	NCP 165
Succinatimonas sp. UBA4288	1947572	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.56384	39	-	DGVI01	175	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456455	GCA_002394925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/925/GCA_002394925.1_ASM239492v1	28894102	-
Acetobacter sp. CAG:267	1262684	PRJEB799	206744	Proteobacteria	Alphaproteobacteria	1.72331	46.9	-	CBBH01	76	1580	1538	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138594	GCA_000434135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/135/GCA_000434135.1_MGS267	-	-
Roseburia sp. CAG:197	1262943	PRJEB752	206638	Terrabacteria group	Firmicutes	2.61318	41.3	-	CBBL01	159	2440	2420	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138601	GCA_000434275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/275/GCA_000434275.1_MGS197	-	-
Enhydrobacter sp. UBA4563	1946462	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.52582	43.9	-	DGKT01	31	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455508	GCA_002387105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/105/GCA_002387105.1_ASM238710v1	28894102	-
Vibrio owensii 47666-1	1344582	PRJNA207882	207882	Proteobacteria	Gammaproteobacteria	5.83372	45.5	-	JPRC01	55	5302	5124	1/14/15	4/2/17	Contig	Australian Institute of Marine Science	SAMN02946480	GCA_000817825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/825/GCA_000817825.1_ASM81782v1	-	47666-1
Serratia fonticola	47917	PRJNA398014	398014	Proteobacteria	Gammaproteobacteria	5.47474	53.9	-	NQMP01	84	5006	4859	8/24/17	8/27/17	Contig	Osaka Ohtani University	SAMN07499409	GCA_002269665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/665/GCA_002269665.1_ASM226966v1	-	BWK15
Faecalibacterium sp. CAG:74	1262897	PRJEB994	206772	Terrabacteria group	Firmicutes	2.91596	58.1	-	CBJB01	128	2510	2464	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138764	GCA_000437595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/595/GCA_000437595.1_MGS74	-	-
Bordetella hinzii 5132	1331257	PRJNA202160	202160	Proteobacteria	Betaproteobacteria	4.92462	66.7	-	JHEQ01	46	4674	4446	4/30/14	4/2/17	Contig	JCVI	SAMN02263898	GCA_000657755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/755/GCA_000657755.1_gbh02v01	-	5132
Helicobacter sp. 13S00401-1	1905758	PRJNA344861	344861	Proteobacteria	delta/epsilon subdivisions	1.83523	34.7	-	MLAR01	59	1660	1588	8/28/17	8/30/17	Contig	Utrecht University	SAMN05851388	GCA_002272925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/925/GCA_002272925.1_ASM227292v1	28827684	13S00401-1
Nitrosospira sp. 56-18	1895901	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	3.29185	55.9	-	MKVR01	54	3070	2926	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660612	GCA_001899235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/235/GCA_001899235.1_ASM189923v1	-	-
Pseudomonas denitrificans (nomen rejiciendum)	43306	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	7.03354	66	-	JVTH01	123	6659	6431	7/10/15	5/24/17	Scaffold	University of Washington	SAMN03197313	GCA_001062775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/775/GCA_001062775.1_ASM106277v1	26230489	1332_PDEN
Kocuria sp. WRN011	2029858	PRJNA400322	400322	Terrabacteria group	Actinobacteria	3.32611	64	-	NSGI01	23	3039	2905	9/12/17	9/14/17	Contig	"Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences"	SAMN07563699	GCA_002295155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/155/GCA_002295155.1_ASM229515v1	-	WRN011
Halorubrum ezzemoulense	337243	PRJNA232799	232799	Euryarchaeota	Halobacteria	3.54572	67	-	NHPB01	120	3525	3276	8/15/17	8/17/17	Scaffold	University of Conn.	SAMN02716043	GCA_002252835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/835/GCA_002252835.1_ASM225283v1	24782836	G37
Sphingopyxis sp. LC81	1502850	PRJNA248597	248597	Proteobacteria	Alphaproteobacteria	4.39729	64.9	-	JNFD01	48	4170	4053	9/22/14	4/9/17	Contig	Monash University Malaysia	SAMN02799681	GCA_000756375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/375/GCA_000756375.1_ASM75637v1	25377711	LC81
Leifsonia sp. Leaf325	1736337	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.73212	68.7	-	LMOK01	5	3485	3378	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151727	GCA_001423545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/545/GCA_001423545.1_Leaf325	26633631	Leaf325
Streptomyces lavendulae subsp. lavendulae JCM 4055	1303691	PRJDB942	245963	Terrabacteria group	Actinobacteria	2.17761	67.7	-	BBGA01	2190	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016951	GCA_001313525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/525/GCA_001313525.1_ASM131352v1	-	JCM 4055
Micrococcus sp. HMSC30C05	1581070	PRJNA269839	269839	Terrabacteria group	Actinobacteria	2.36266	72.2	-	LWNK01	814	2367	1927	10/17/16	10/21/16	Scaffold	The Genome Institute at Washington University	SAMN03436227	GCA_001807715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/715/GCA_001807715.1_ASM180771v1	-	HMSC30C05
Lysobacter sp. Root983	1736613	PRJNA297942	297942	Proteobacteria	Gammaproteobacteria	4.79715	68.3	-	LMJO01	22	4235	4108	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155882	GCA_001429345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/345/GCA_001429345.1_Root983	26633631	Root983
Ensifer sp. Root231	1736497	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	7.71719	61.1	-	LMIQ01	40	7415	7028	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155766	GCA_001428785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/785/GCA_001428785.1_Root231	26633631	Root231
Bifidobacterium pseudolongum subsp. pseudolongum DSM 20099	1437595	PRJNA237576	237576	Terrabacteria group	Actinobacteria	1.901	63.1	-	JDTZ01	23	1612	1509	11/4/14	4/2/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442017	GCA_000771225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/225/GCA_000771225.1_DSM-20099	25658111	DSM 20099
Butyrivibrio sp. MB2005	1280678	PRJNA185703	185703	Terrabacteria group	Firmicutes	4.17854	41.3	-	AUJP01	42	3655	3526	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441494	GCA_000424285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/285/GCA_000424285.1_ASM42428v1	-	MB2005
Alloscardovia omnicolens	419015	PRJNA267549	267549	Terrabacteria group	Actinobacteria	1.78007	46.8	-	JUQY01	64	1533	1429	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03198050	GCA_001059215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/215/GCA_001059215.1_ASM105921v1	26230489	842_GVAG
Streptomyces rimosus subsp. rimosus	132474	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.60324	72.1	-	JOBV01	191	7408	7039	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645402	GCA_000718755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/755/GCA_000718755.1_ASM71875v1	-	NRRL WC-3560
Curtobacterium sp. UCD-KPL2560	1885315	PRJNA336181	336181	Terrabacteria group	Actinobacteria	3.48049	72.4	-	MCIG01	156	3266	3107	8/15/16	4/13/17	Contig	Forsyth Institute	SAMN05505369	GCA_001705035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/035/GCA_001705035.1_ASM170503v1	-	UCD-KPL2560
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.65861	58.9	-	LNWE01	66	4418	4286	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339841	GCA_001681305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/305/GCA_001681305.1_ASM168130v1	-	F2587
Pseudomonas lundensis	86185	PRJNA397499	397499	Proteobacteria	Gammaproteobacteria	4.93193	58.7	-	NQKJ01	157	4596	4349	8/24/17	8/27/17	Scaffold	CSIRO Agriculture and Food	SAMN07459813	GCA_002269015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/015/GCA_002269015.1_ASM226901v1	-	L1788
Brochothrix thermosphacta	2756	PRJNA338887	338887	Terrabacteria group	Firmicutes	2.58793	36.3	-	MDLS01	130	2501	2385	8/29/16	4/5/17	Contig	CSIRO Agriculture and Food; Food Safety and Stability Group	SAMN05567459	GCA_001715775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/775/GCA_001715775.1_ASM171577v1	-	Bth-7818
Raoultella ornithinolytica 10-5246	883121	PRJNA52145	52145	Proteobacteria	Gammaproteobacteria	5.73598	55.4	-	AGDM01	4	5519	5255	2/17/12	3/30/17	Scaffold	Broad Institute	SAMN02463896	GCA_000247895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/895/GCA_000247895.1_Kleb_oxyt_10-5246_V1	-	Oct-46
Mycoplasma sp. Bg1	1784822	PRJNA309720	309720	Terrabacteria group	Tenericutes	0.785028	26.5	-	LSMX01	5	-	-	5/10/16	5/10/16	Contig	"Sanya Institute of Deep-sea Science and Engineering, Chinese Academy of Sciences"	SAMN04386405	GCA_001641205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/205/GCA_001641205.1_ASM164120v1	-	-
Streptococcus oralis subsp. tigurinus	1077464	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.91303	41.2	-	NCUA01	7	1897	1784	4/18/17	4/21/17	Contig	Slagelse Hospital	SAMN06705634	GCA_002096255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/255/GCA_002096255.1_ASM209625v1	27325438	RH_49702_11
Mycobacterium asiaticum	1790	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.88806	65.3	-	LZLS01	226	5422	5059	6/17/16	4/5/17	Contig	JCVI	SAMN04634167	GCA_001673365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/365/GCA_001673365.1_ASM167336v1	-	1165133.8
Porphyromonas gulae	111105	PRJNA253701	253701	FCB group	Bacteroidetes/Chlorobi group	2.46338	48.5	-	JRAI01	89	2205	2036	10/27/14	4/2/17	Contig	UC Davis	SAMN03002869	GCA_000768785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/785/GCA_000768785.1_ASM76878v1	25858832	COT-052 OH1451
Citrobacter amalonaticus	35703	PRJNA292637	292637	Proteobacteria	Gammaproteobacteria	4.95689	53.4	-	LIGB01	39	4895	4651	8/31/15	4/4/17	Contig	University of Malaya	SAMN03982941	GCA_001276125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/125/GCA_001276125.1_ASM127612v1	-	YG8
Blastomonas sp. CCH10-E1	1768737	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	3.89531	64.3	-	LSHL01	200	3805	3631	2/10/16	4/12/17	Contig	Georgia Institute of Technology	SAMN04299408	GCA_001555795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/795/GCA_001555795.1_ASM155579v1	-	CCH10-E1
Vibrio jasicida	766224	PRJNA380428	380428	Proteobacteria	Gammaproteobacteria	5.85897	45.1	-	NRQQ01	115	5389	5193	9/7/17	9/20/17	Contig	Universidad Cientifica del Sur	SAMN06843738	GCA_002290005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/005/GCA_002290005.1_V1B	-	V1B
Haloferax sp. Q22	1526048	PRJNA294240	294240	Euryarchaeota	Halobacteria	3.97756	65.1	-	LOEP01	56	4000	3849	12/23/15	4/11/17	Scaffold	"Institute of   Microbiology, Chinese Academy of Sciences"	SAMN04018175	GCA_001482285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/285/GCA_001482285.1_ASM148228v1	-	Q22
Pseudomonas protegens	380021	PRJNA290438	290438	Proteobacteria	Gammaproteobacteria	6.88663	63.4	-	LHUW01	19	6299	6162	8/18/15	4/4/17	Contig	JLU	SAMN03891658	GCA_001269495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/495/GCA_001269495.1_ASM126949v1	-	BRIP
Bacillus stratosphericus	293386	PRJNA327847	327847	Terrabacteria group	Firmicutes	3.6285	41.3	-	MWKO01	159	3790	3646	4/3/17	4/5/17	Contig	University of Central Florida	SAMN05359986	GCA_002077245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/245/GCA_002077245.1_ASM207724v1	-	5Co
Massilia sp. LC238	1502852	PRJNA248601	248601	Proteobacteria	Betaproteobacteria	5.79957	65.3	-	JNNN01	83	5182	4994	7/28/14	4/9/17	Contig	Monash University Malaysia	SAMN02799686	GCA_000735635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/635/GCA_000735635.1_ASM73563v1	25377711	LC238
Rhizobacter sp. JGI 0001007-A16	1298878	PRJNA190858	190858	Proteobacteria	Betaproteobacteria	1.05799	59.2	-	AXVY01	120	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440723	GCA_000484755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/755/GCA_000484755.1_ASM48475v1	-	JGI 0001007-A16
Pelomonas sp. JGI 0001002-B21	1094937	PRJNA176062	176062	Proteobacteria	Betaproteobacteria	0.154118	60.5	-	AUOC01	75	-	-	7/16/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441133	GCA_000464015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/015/GCA_000464015.1_ASM46401v1	-	JGI 0001002-B21
Anoxybacillus sp. UARK-01	1895648	PRJNA379989	379989	Terrabacteria group	Firmicutes	3.66949	42.6	-	NASY01	73	3648	3377	3/30/17	4/3/17	Contig	University of Arkansas	SAMN06624670	GCA_002075365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/365/GCA_002075365.1_ASM207536v1	-	UARK-01
Gordonia sp. LAM0048	1633223	PRJNA320468	320468	Terrabacteria group	Actinobacteria	5.65475	67.9	-	LXRE01	131	5144	4610	6/7/16	4/12/17	Contig	Institute of Agricultural Resources and Regional Planning	SAMN04939718	GCA_001659625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/625/GCA_001659625.1_ASM165962v1	-	LAM0048
Blautia sp. KB1	2025493	PRJNA397535	397535	Terrabacteria group	Firmicutes	5.87894	46.3	-	NQOF01	47	5148	4968	8/25/17	8/28/17	Contig	Kyung Hee University 	SAMN07460455	GCA_002270465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/270/465/GCA_002270465.1_ASM227046v1	-	KB1
Dickeya sp. NCPPB 569	568768	PRJNA172910	172910	Proteobacteria	Gammaproteobacteria	4.22076	52.601	chromosome:CM001975.1	AOOD01	6	-	-	6/4/13	3/22/15	Chromosome	James Hutton Institute	SAMN02470100	GCA_000406125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/125/GCA_000406125.1_DXY569_1.0	24265502	NCPPB 569
Dickeya solani	1089444	PRJNA270490	270490	Proteobacteria	Gammaproteobacteria	4.87181	56.2	-	JWLR01	24	4271	4099	10/21/15	4/4/17	Scaffold	CNRS - UPR2355	SAMN03266540	GCA_001401695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/695/GCA_001401695.1_Dsl_1.0	26467299	RNS 07.7.3B
Shewanella algae	38313	PRJNA312015	312015	Proteobacteria	Gammaproteobacteria	4.85044	53	-	LVDU01	27	4314	4141	9/20/17	9/22/17	Scaffold	National Chung Cheng University	SAMN04492206	GCA_002318995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/995/GCA_002318995.1_ASM231899v1	-	YHL
Pluralibacter gergoviae ATCC 33028 = NBRC 105706	1354260	PRJDB366	172427	Proteobacteria	Gammaproteobacteria	5.66277	58.6	-	BCZS01	104	5475	5176	3/11/16	4/5/17	Contig	National Institute of Technology and Evaluation	SAMD00046898	GCA_001598855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/855/GCA_001598855.1_ASM159885v1	-	NBRC 105706
Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759	1219067	PRJNA208003	208003	Proteobacteria	Gammaproteobacteria	5.11381	45	-	ATWU01	172	4705	4352	7/19/13	4/4/17	Scaffold	University of Florence	SAMN02471760	GCA_000438785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/785/GCA_000438785.2_ASM43878v2	23969053	DSM 759
Chryseobacterium indologenes	253	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	5.20068	36.8	-	DBES01	14	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453945	GCA_002294525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/525/GCA_002294525.1_ASM229452v1	28894102	-
Elizabethkingia meningoseptica	238	PRJNA352299	352299	FCB group	Bacteroidetes/Chlorobi group	3.9551	36.4	-	MPOG01	19	3561	3461	2/16/17	4/6/17	Contig	Huaqiao University	SAMN06014515	GCA_002002525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/525/GCA_002002525.1_ASM200252v1	-	61421 PRCM
Pseudomonas oryzihabitans	47885	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.23746	65.2	-	DGFU01	137	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453104	GCA_002391835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/835/GCA_002391835.1_ASM239183v1	28894102	-
Pseudomonas nitroreducens	46680	PRJNA184698	184698	Proteobacteria	Gammaproteobacteria	6.93142	64.2	-	JNFO01	579	-	-	7/25/14	7/25/14	Contig	Georgia Institute of Technology	SAMN02798138	GCA_000733635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/635/GCA_000733635.1_ASM73363v1	-	DPB
Aeromonas sp. SCS5	1519205	PRJNA285016	285016	Proteobacteria	Gammaproteobacteria	4.42876	59.2	-	LFCS01	42	4158	4023	11/29/16	4/16/17	Contig	Chinese Academy of Sciences	SAMN03734924	GCA_001887375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/375/GCA_001887375.1_ASM188737v1	27396922	SCS5
Mycobacterium fortuitum	1766	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.54205	66.1	-	LZSR01	165	6401	6151	6/17/16	4/5/17	Contig	JCVI	SAMN04691959	GCA_001665795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/795/GCA_001665795.1_ASM166579v1	-	852002-53395_SCH5661144-a
Oscillibacter sp. 57_20	1897011	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.46493	58.2	-	MNTE01	25	1405	1343	12/23/16	12/23/16	Scaffold	None	SAMN05717288	GCA_001916835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/835/GCA_001916835.1_ASM191683v1	27819664	-
Limnohabitans sp. 2KL-3	1100700	PRJEB9573	292362	Proteobacteria	Betaproteobacteria	4.77199	59	-	CXON01	60	4304	4137	8/8/15	8/1/17	Contig	Biology Centre of CAS	SAMEA3448421	GCA_001269405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/405/GCA_001269405.1_2KL-3.a1	-	2KL-3
Clostridium tyrobutyricum	1519	PRJNA267094	267094	Terrabacteria group	Firmicutes	3.05286	30.9	-	JTER01	58	3024	2872	1/8/15	4/2/17	Scaffold	Agroscope	SAMN03177790	GCA_000816585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/585/GCA_000816585.1_ASM81658v1	25767226	FAM22552
Halorubrum sp. SD612	1855863	PRJNA383315	383315	Euryarchaeota	Halobacteria	3.30813	70.1	-	NEWI01	402	3491	3022	5/12/17	5/23/17	Scaffold	"University of Sevilla, Spain"	SAMN06761329	GCA_002135005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/005/GCA_002135005.1_ASM213500v1	-	SD612
Pseudoxanthomonas sp. YR558	1881044	PRJEB17561	352012	Proteobacteria	Gammaproteobacteria	3.79118	66.7	-	FPCI01	4	3535	3449	11/2/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428990	GCA_900116385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/385/GCA_900116385.1_IMG-taxon_2690315625_annotated_assembly	-	YR558
Thioclava sp. ElOx9	1549850	PRJNA291933	291933	Proteobacteria	Alphaproteobacteria	4.41575	63.8	-	NBXF01	58	4201	4046	4/11/17	4/13/17	Contig	Caltech	SAMN03956615	GCA_002085925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/925/GCA_002085925.1_ASM208592v1	-	Elox9
Wohlfahrtiimonas chitiniclastica	400946	PRJNA382997	382997	Proteobacteria	Gammaproteobacteria	2.13472	43.6	-	NEFH01	13	2049	1978	8/15/17	8/17/17	Contig	Centers for Disease Control and Prevention	SAMN06758449	GCA_002252245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/245/GCA_002252245.1_ASM225224v1	-	F6515
Sinorhizobium sp. A49	1945861	PRJNA369723	369723	Proteobacteria	Alphaproteobacteria	6.84794	61.8	-	MUNW01	95	6507	6255	2/16/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN06293010	GCA_002002725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/725/GCA_002002725.1_ASM200272v1	-	A49
Pandoraea sp. 64-18	1895806	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	4.87568	63.8	-	MKVU01	24	4393	4266	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660615	GCA_001899225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/225/GCA_001899225.1_ASM189922v1	-	-
Methylotenera sp. 24-45-7	1970397	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	1.9581	45	-	NCHI01	210	2032	1935	8/16/17	8/16/17	Scaffold	None	SAMN06622272	GCA_002281815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/815/GCA_002281815.1_ASM228181v1	-	-
Rodentibacter pneumotropicus	758	PRJNA343597	343597	Proteobacteria	Gammaproteobacteria	2.34204	40.6	-	MLAF01	123	2234	2078	2/15/17	4/6/17	Contig	University of Copenhagen	SAMN05860609	GCA_001998725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/725/GCA_001998725.1_ASM199872v1	-	Ppn222
Cupriavidus sp. SK-3	1470558	PRJNA239721	239721	Proteobacteria	Betaproteobacteria	7.42915	65	-	JFJV02	299	6834	6405	3/28/14	4/9/17	Scaffold	University of North Texas	SAMN02666914	GCA_000611145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/145/GCA_000611145.2_CupriavidusSK32.0	24994805	SK-3
Microbacterium sp. LKL04	912630	PRJEB15797	347704	Terrabacteria group	Actinobacteria	2.92212	69.7	chromosome I:NZ_LT627736.1/LT627736.1	-	1	2834	2762	10/17/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216488	GCA_900102005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/005/GCA_900102005.1_IMG-taxon_2667527218_annotated_assembly	-	LKL04
Snodgrassella alvi	1196083	PRJNA339423	339423	Proteobacteria	Betaproteobacteria	2.43038	41.2	-	NAHF01	120	2194	2083	4/13/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603561	GCA_002088475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/475/GCA_002088475.1_ASM208847v1	-	A5
Xanthomonas translucens pv. arrhenatheri LMG 727	1195923	PRJEB9902	292952	Proteobacteria	Gammaproteobacteria	4.75321	68.4	-	CXOI01	89	3928	3712	8/15/15	4/4/17	Contig	CEBITEC	SAMEA3486180	GCA_001282805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/805/GCA_001282805.1_LMG727	-	-
Acinetobacter venetianus	52133	PRJNA260598	260598	Proteobacteria	Gammaproteobacteria	3.52479	39.4	-	JRUJ01	399	3406	3242	3/9/16	4/5/17	Contig	University of Florence	SAMN03103721	GCA_001584675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/675/GCA_001584675.1_ASM158467v1	26902269	LUH8758
Vibrio tasmaniensis ZS-17	1191326	PRJNA167050	167050	Proteobacteria	Gammaproteobacteria	5.61242	44.3	-	AJZQ02	58	5072	4721	6/25/12	4/5/17	Scaffold	Broad Institute	SAMN02470446	GCA_000272445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/445/GCA_000272445.2_ASM27244v2	22955834	ZS-17
Vibrio crassostreae	246167	PRJEB5885	284691	Proteobacteria	Gammaproteobacteria	5.47982	44.2	-	CCKC01	86	4942	4772	5/20/15	4/3/17	Contig	STATION BIOLOGIQUE DE ROSCOFF	SAMEA2591298	GCA_001048575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/575/GCA_001048575.1_VLGP107_PRJEB5885	-	LGP107
Variovorax sp. KK3	1855728	PRJNA214105	214105	Proteobacteria	Betaproteobacteria	7.1908	67.5	-	LYVO01	239	6776	6537	2/3/17	4/17/17	Contig	Georgia Institute of Technology	SAMN05161926	GCA_001984055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/055/GCA_001984055.1_ASM198405v1	-	KK3
Thiomicrospira sp. CG2_30_44_34	1805397	PRJNA297582	297582	Proteobacteria	Gammaproteobacteria	2.43087	43.7	-	MNZS01	80	2325	2203	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328312	GCA_001873715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/873/715/GCA_001873715.1_ASM187371v1	27112493	-
Micavibrio sp. UBA1573	1946905	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.22118	46.3	-	DCOJ01	158	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452379	GCA_002322315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/315/GCA_002322315.1_ASM232231v1	28894102	-
Mesorhizobium sp. 1M-11	1529006	PRJNA295632	295632	Proteobacteria	Alphaproteobacteria	6.69428	61.9	-	LJSD01	77	6442	6261	9/30/15	4/11/17	Scaffold	University of Western Australia	SAMN04076519	GCA_001303895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/895/GCA_001303895.1_ASM130389v1	26586870	1M-11
Methylophaga sp. 41_12_T18	1856284	PRJNA320927	320927	Proteobacteria	Gammaproteobacteria	2.42925	41.2	-	MAAI01	94	2406	2354	5/31/17	5/31/17	Scaffold	Lawrence Berkeley National Lab	SAMN05179556	GCA_002163115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/115/GCA_002163115.1_ASM216311v1	28652349	-
Cycloclasticus sp. symbiont of Poecilosclerida sp. M	1840537	PRJNA318573	318573	Proteobacteria	Gammaproteobacteria	2.32104	43.7	-	LWTN01	244	2179	1998	4/19/17	4/19/17	Scaffold	Max Planck Institute for Marine Microbiology	SAMN04858326	GCA_002101225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/225/GCA_002101225.1_ASM210122v1	-	-
Hydrogenophaga sp. IBVHS1	1985169	PRJNA384425	384425	Proteobacteria	Betaproteobacteria	4.43478	64.9	-	NFUU01	3	4285	4179	5/10/17	5/22/17	Scaffold	University of Oslo	SAMN06840507	GCA_002127265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/265/GCA_002127265.1_ASM212726v1	-	IBVHS1
Cellulomonas sp. HZM	1454010	PRJNA236451	236451	Terrabacteria group	Actinobacteria	3.55928	73	-	JEOE01	77	3235	3102	6/16/14	4/9/17	Contig	Monash University Sunway Campus	SAMN02596470	GCA_000708885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/885/GCA_000708885.1_CelluHZM_1.0	-	HZM
Chryseobacterium sp. CF284	1500281	PRJNA247523	247523	FCB group	Bacteroidetes/Chlorobi group	4.4879	36.6	-	JQKZ01	78	4152	3959	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02787072	GCA_000746315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/315/GCA_000746315.1_ASM74631v1	-	CF284
Akkermansia sp. Phil8	1929996	PRJNA357304	357304	PVC group	Verrucomicrobia	2.43773	55.3	-	MSGW01	37	-	-	1/10/17	1/10/17	Scaffold	University of Queensland	SAMN06140815	GCA_001940945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/945/GCA_001940945.1_ASM194094v1	-	-
Sulfurimonas sp. RIFOXYB2_FULL_37_5	1802257	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.46516	35.7	-	MICD01	741	1621	1070	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314450	GCA_001829755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/755/GCA_001829755.1_ASM182975v1	27774985	-
Atopobium sp. UBA1382	1946064	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.99491	66.4	-	DBQY01	23	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06456175	GCA_002305805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/805/GCA_002305805.1_ASM230580v1	28894102	-
Pragia fontium	82985	PRJNA268155	268155	Proteobacteria	Gammaproteobacteria	4.09463	45.4	chromosome:NZ_CP010423.1/CP010423.1	-	1	3604	3468	6/3/15	4/10/17	Complete Genome	Masaryk universtiy	SAMN03216551	GCA_001026985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/985/GCA_001026985.1_ASM102698v1	26159528	24613
Xanthomonas sp. Leaf148	1736275	PRJNA297956	297956	Proteobacteria	Gammaproteobacteria	5.21773	64.1	-	LMOP01	15	4548	4156	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151655	GCA_001423585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/585/GCA_001423585.1_Leaf148	26633631	Leaf148
Aeromicrobium sp. Root236	1736498	PRJNA297942	297942	Terrabacteria group	Actinobacteria	3.91917	69	-	LMIS01	1	3933	3847	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04155767	GCA_001428805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/805/GCA_001428805.1_Root236	26633631	Root236
Acidiphilium sp. 37-64-53	1970299	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	4.03344	63.5	-	NCBU01	211	3798	3620	8/16/17	8/16/17	Contig	None	SAMN06622416	GCA_002279345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/345/GCA_002279345.1_ASM227934v1	-	-
Hyphomicrobium sp. 12-62-95	1970389	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	4.39188	61.6	-	NCCZ01	65	4289	4123	8/16/17	8/16/17	Scaffold	None	SAMN06622385	GCA_002279935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/935/GCA_002279935.1_ASM227993v1	-	-
Idiomarina sp. REDSEA-S21_B4	1811541	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	2.25715	47.2	-	LUNZ01	60	-	-	4/22/16	7/27/16	Contig	King Abdullah University of Science and Technology	SAMN04534575	GCA_001626605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/605/GCA_001626605.1_ASM162660v1	27377622	-
Halomonas sp. hl-4	1761789	PRJEB22442	401566	Proteobacteria	Gammaproteobacteria	4.23868	55.8	chromosome I:LT907845.1	-	1	4014	3865	9/6/17	9/6/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04488142	GCA_900215475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/215/475/GCA_900215475.1_IMG-taxon_2623620617_annotated_assembly	-	HL-4
Nitrosopumilus sp. LS_AOA	1671876	PRJNA287175	287175	TACK group	Thaumarchaeota	1.92518	31.6	-	LFLC01	67	-	-	2/1/16	2/1/16	Contig	Hong Kong University of Science and Technology	SAMN03777287	GCA_001543015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/015/GCA_001543015.1_ASM154301v1	26637128	-
Sphingobium sp. AP49	1144307	PRJNA83037	83037	Proteobacteria	Alphaproteobacteria	4.47927	64	-	AJVL01	99	4219	4060	7/25/12	5/19/17	Contig	Oak Ridge National Lab	SAMN00839615	GCA_000281715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/715/GCA_000281715.1_ASM28171v1	23045501	AP49
Megasphaera sp. DISK 18	1776081	PRJNA314560	314560	Terrabacteria group	Firmicutes	2.48669	50.6	-	LUGJ01	65	2297	2199	7/10/16	4/13/17	Contig	CSIR-Institute of Microbial Technology	SAMN04538185	GCA_001682955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/955/GCA_001682955.1_ASM168295v1	-	DISK 18
Citromicrobium sp. RCC1885	1647104	PRJNA282067	282067	Proteobacteria	Alphaproteobacteria	3.28171	64.8	-	LBLY01	14	3203	3127	10/2/15	4/11/17	Contig	Xiamen University	SAMN03566751	GCA_001306365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/365/GCA_001306365.1_ASM130636v1	-	RCC1885
Sphingobacterium sp. Ag1	1643451	PRJNA281421	281421	FCB group	Bacteroidetes/Chlorobi group	6.07589	40.3	-	LBGU01	44	5053	4930	5/5/15	4/18/17	Contig	New Mexico State University	SAMN03487931	GCA_000988325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/325/GCA_000988325.1_ASM98832v1	-	Ag1
Rothia sp. HMSC069D01	1715189	PRJNA296317	296317	Terrabacteria group	Actinobacteria	2.3462	59.5	-	LTIJ01	36	1843	1752	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477547	GCA_001810135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/135/GCA_001810135.1_ASM181013v1	-	HMSC069D01
Rhodanobacter sp. Root480	1736542	PRJNA297942	297942	Proteobacteria	Gammaproteobacteria	3.67329	65.6	-	LMEX01	4	3276	3197	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04155811	GCA_001426645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/645/GCA_001426645.1_Root480	26633631	Root480
Thiomonas sp. 14-66-4	1970450	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	1.47142	66.8	-	NCKE01	799	1838	1741	8/16/17	8/16/17	Contig	None	SAMN06622198	GCA_002279105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/105/GCA_002279105.1_ASM227910v1	-	-
Selenomonas sp. oral taxon 892 str. F0426	1321786	PRJNA198895	198895	Terrabacteria group	Firmicutes	2.31479	54.9	-	AWVG01	40	2205	2041	9/16/13	4/9/17	Scaffold	Washington University	SAMN02436726	GCA_000468035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/035/GCA_000468035.1_ASM46803v1	-	F0426
Aerococcus sp. HMSC061A03	1739396	PRJNA300046	300046	Terrabacteria group	Firmicutes	2.17615	47	-	LTXF01	58	1982	1894	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480059	GCA_001813115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/115/GCA_001813115.1_ASM181311v1	-	HMSC061A03
Methanosarcina sp. 2.H.T.1A.3	1483597	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.08361	42.8	-	JJOX01	92	3508	3291	4/23/15	4/10/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708989	GCA_000979425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/425/GCA_000979425.1_gtlEnvA5udCFS	25756680	2.H.T.1A.3
Haemophilus sp. HMSC071C11	1715123	PRJNA296251	296251	Proteobacteria	Gammaproteobacteria	1.80737	38	-	LTOU01	60	1800	1676	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498622	GCA_001837655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/655/GCA_001837655.1_ASM183765v1	-	HMSC071C11
Pseudonocardia sp. P2	882856	PRJNA51929	51929	Terrabacteria group	Actinobacteria	7.57163	73.1	-	AEGE01	1617	7463	6333	9/14/10	5/19/17	Contig	The Genome Analysis Centre	SAMN02471720	GCA_000179835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/835/GCA_000179835.2_ASM17983v2	-	P2
Afipia sp. OHSU_I-C6	1297864	PRJNA191810	191810	Proteobacteria	Alphaproteobacteria	5.09143	61.1	-	APJE01	67	4937	4787	11/20/13	4/9/17	Contig	FDA	SAMN02952941	GCA_000497655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/655/GCA_000497655.1_OHSU_J-C6	24155888	OHSU_I-C6
Alteromonas sp. PEL 68C	1892902	PRJNA340037	340037	Proteobacteria	Gammaproteobacteria	4.41576	44.5	-	MEJI01	274	4018	3640	1/17/17	4/16/17	Contig	UFRJ	SAMN05630995	GCA_001953645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/645/GCA_001953645.1_ASM195364v1	-	PEL 68C
Loktanella sp. UBA3435	1946767	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.83397	54.9	-	DFSO01	96	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454010	GCA_002378665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/665/GCA_002378665.1_ASM237866v1	28894102	-
Sulfurospirillum sp. UBA1457	1947593	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	1.64171	41.5	-	DCSV01	200	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455513	GCA_002325805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/805/GCA_002325805.1_ASM232580v1	28894102	-
Thalassospira sp. MCCC 1A02803	501863	PRJNA235144	235144	Proteobacteria	Alphaproteobacteria	4.43227	54.8	-	JAMA01	22	4103	4027	2/2/17	4/17/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02722721	GCA_001983425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/425/GCA_001983425.1_ASM198342v1	-	MCCC 1A02803
Collinsella sp. TF06-26	2018038	PRJNA391838	391838	Terrabacteria group	Actinobacteria	2.26055	59.8	-	NKXR01	41	1968	1879	7/25/17	7/28/17	Scaffold	The Beijing Genomics Institute 	SAMN07276803	GCA_002232035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/035/GCA_002232035.1_ASM223203v1	-	TF06-26
Delftia sp. K82	1472718	PRJNA240926	240926	Proteobacteria	Betaproteobacteria	7.11252	65.9	-	MYFL01	21	6321	6117	6/14/17	6/19/17	Scaffold	Korea Basic Science Institute	SAMN02680294	GCA_002193035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/035/GCA_002193035.1_ASM219303v1	-	K82
Coprococcus sp. CAG:131-related_45_246	1896998	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.74257	44.9	-	MNSF01	72	1621	1500	12/23/16	12/23/16	Scaffold	None	SAMN05717263	GCA_001916315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/315/GCA_001916315.1_ASM191631v1	27819664	-
Capnocytophaga sp. oral taxon 332 str. F0381	1127692	PRJNA80243	80243	FCB group	Bacteroidetes/Chlorobi group	2.65604	38.4	-	AMET01	103	2478	2317	12/10/12	4/16/17	Scaffold	Washington University	SAMN02436794	GCA_000318275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/275/GCA_000318275.2_ASM31827v2	-	F0381
Veillonella sp. ICM51a	936591	PRJNA165917	165917	Terrabacteria group	Firmicutes	2.15703	38.9	-	JAPX01	53	2026	1913	1/28/14	4/17/17	Contig	JCVI	SAMN02641570	GCA_000524355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/355/GCA_000524355.1_VspICM51av1.0	-	ICM51a
Peptoniphilus sp. ChDC B134	1354300	PRJNA210514	210514	Terrabacteria group	Firmicutes	1.49976	31	-	AUQY01	5	1463	1361	9/18/13	4/9/17	Contig	KCOM and Dental School of Chosun University	SAMN02469576	GCA_000468535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/535/GCA_000468535.1_de_novo	24158551	ChDC B134
Bartonella sp. 11B	1933908	PRJNA360985	360985	Proteobacteria	Alphaproteobacteria	1.57954	36	chromosome:NZ_CP019783.1/CP019783.1	-	1	1364	1234	3/7/17	3/10/17	Chromosome	University of Basel	SAMN06213870	GCA_002022625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/625/GCA_002022625.1_ASM202262v1	-	11B
Tannerella sp. oral taxon BU063 isolate Cell 1/3	1411022	PRJNA222525	222525	FCB group	Bacteroidetes/Chlorobi group	2.78564	55.3	-	AYYE01	1263	2420	2371	12/18/13	12/18/13	Contig	The Ohio State University	SAMN02419809	GCA_000510545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/510/545/GCA_000510545.1_BU063sc13	-	-
Eggerthella sp. 51_9	1897000	PRJNA321218	321218	Terrabacteria group	Actinobacteria	1.75682	52.7	-	MNQD01	46	1681	1387	12/23/16	12/23/16	Scaffold	None	SAMN05717209	GCA_001915265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/265/GCA_001915265.1_ASM191526v1	27819664	-
Porphyromonas sp. COT-239 OH1446	1515613	PRJNA253606	253606	FCB group	Bacteroidetes/Chlorobi group	1.96178	53.9	-	JRAO01	37	1606	1538	10/27/14	4/9/17	Contig	UC Davis	SAMN03002887	GCA_000768875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/875/GCA_000768875.1_ASM76887v1	25858832	COT-239 OH1446
Neisseria sp. HMSC03D10	1581049	PRJNA269803	269803	Proteobacteria	Betaproteobacteria	2.53572	51.3	-	LWNP01	140	2477	2273	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436200	GCA_001807625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/625/GCA_001807625.1_ASM180762v1	-	HMSC03D10
Campylobacter sp. BCW_7460	1904032	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.62972	30.3	-	MKAA01	36	1690	1574	10/4/16	4/13/17	Contig	University of California at Davis	SAMN04532445	GCA_001764115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/115/GCA_001764115.1_ASM176411v1	-	BCW_7460
Alistipes sp. An116	1965546	PRJNA377666	377666	FCB group	Bacteroidetes/Chlorobi group	3.25424	58.6	-	NFLR01	58	2713	2553	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473588	GCA_002161005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/005/GCA_002161005.1_ASM216100v1	-	An116
Olsenella sp. Marseille-P2912	1852386	PRJEB18031	354756	Terrabacteria group	Actinobacteria	2.63342	67.4	-	FQTO01	3	2367	2264	12/3/16	4/17/17	Scaffold	URMITE	SAMEA4555824	GCA_900128445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/445/GCA_900128445.1_PRJEB18031	-	Marseille-P2912
Propionibacterium sp. KPL1844	1203573	PRJNA169462	169462	Terrabacteria group	Actinobacteria	2.12785	64.2	-	AXMM01	4	1820	1722	10/21/13	4/17/17	Scaffold	Broad Institute	SAMN02597019	GCA_000477715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/715/GCA_000477715.1_Prop_sp_KPL1844_V1	-	KPL1844
Ralstonia sp. NT80	1218247	PRJDB3346	306476	Proteobacteria	Betaproteobacteria	5.78939	63.6	-	BBQS01	176	5492	5267	12/11/15	4/16/17	Contig	"Genome Research Center, NODAI Research Institute, Tokyo University of Agriculture"	SAMD00023378	GCA_001485395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/395/GCA_001485395.1_ASM148539v1	-	NT80
Parabacteroides sp. HGS0025	1078087	PRJNA72493	72493	FCB group	Bacteroidetes/Chlorobi group	6.76155	44.3	-	AGES01	10	5285	5128	4/7/15	6/12/17	Scaffold	Broad Institute	SAMN03383452	GCA_000969845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/845/GCA_000969845.1_Para_sp_HGS0025_V1	-	HGS0025
Rhodobacter sp. BACL10 MAG-121220-bin24	1655559	PRJNA273799	273799	Proteobacteria	Alphaproteobacteria	2.11229	50.5	-	LIBR01	796	2282	1792	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741992	GCA_001438045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/045/GCA_001438045.1_ASM143804v1	-	-
Micromonospora sp. II	1852777	PRJNA322530	322530	Terrabacteria group	Actinobacteria	6.94647	72.8	-	LYXF01	89	6315	6076	8/23/16	4/13/17	Contig	University of New Hampshire	SAMN05163816	GCA_001709195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/195/GCA_001709195.1_ASM170919v1	-	II
Actinomyces sp. oral taxon 171 str. F0337	706439	PRJNA43131	43131	Terrabacteria group	Actinobacteria	3.00625	67.9	-	AECW01	280	2668	2263	1/27/11	6/15/17	Scaffold	Washington University Genome Center	SAMN00189094	GCA_000186965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/965/GCA_000186965.1_ASM18696v1	-	F0337
Desulfovibrio sp. L21-Syr-AB	1307759	PRJNA215345	215345	Proteobacteria	delta/epsilon subdivisions	3.39091	65.5	-	JOMJ01	5	3218	3076	6/24/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02744827	GCA_000711295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/295/GCA_000711295.1_ASM71129v1	-	L21-Syr-AB
Azospirillum sp. 47_25	1896971	PRJNA321218	321218	Proteobacteria	Alphaproteobacteria	1.83628	46.7	-	MNTU01	48	1860	1781	12/23/16	12/23/16	Scaffold	None	SAMN05717304	GCA_001917125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/125/GCA_001917125.1_ASM191712v1	27819664	-
Fusobacterium sp. CM1	936561	PRJNA165905	165905	Fusobacteria	Fusobacteriia	2.4426	26.7	-	JANB01	155	2386	2189	1/28/14	4/17/17	Contig	JCVI	SAMN02641565	GCA_000524215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/215/GCA_000524215.1_FspCM1v1.0	-	CM1
Prochlorococcus sp. MIT 0603	1499500	PRJNA246696	246696	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.75248	36.3	-	JNAW01	7	1865	1800	9/29/14	4/9/17	Contig	MIT	SAMN02769568	GCA_000760215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/215/GCA_000760215.1_ASM76021v1	25977791	MIT 0603
Shigella sp. FC1172	1890303	PRJNA338856	338856	Proteobacteria	Gammaproteobacteria	4.39227	50.7	-	MDJI01	383	4978	3955	8/26/16	8/8/17	Contig	Christian Medical College	SAMN05572629	GCA_001714975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/975/GCA_001714975.1_ASM171497v1	-	FC1172
Coprobacillus sp. CAG:235	1262854	PRJEB774	206663	Terrabacteria group	Firmicutes	2.35323	29.2	-	CAZR01	159	2357	2339	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138527	GCA_000432795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/795/GCA_000432795.1_MGS235	-	-
Colwellia sp. UCD-KL20	1917165	PRJNA353008	353008	Proteobacteria	Gammaproteobacteria	4.52992	35.7	-	MPHL01	68	3937	3755	1/19/17	4/17/17	Contig	UC Davis	SAMN06007765	GCA_001957175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/957/175/GCA_001957175.1_ASM195717v1	-	UCD-KL20
Thauera sp. ZV-1-C	1792543	PRJNA329026	329026	Proteobacteria	Betaproteobacteria	3.68963	68.2	-	MBFM01	14	3505	3279	7/29/16	6/20/17	Scaffold	"Chongqing Institute of Green and Intelligent Technology, Chinese Academy of Sciences"	SAMN05389979	GCA_001696715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/715/GCA_001696715.1_ASM169671v1	-	ZV-1-C
Exiguobacterium sp. HVEsp1	1934003	PRJNA360577	360577	Terrabacteria group	Firmicutes	2.84882	48.2	-	MTCT01	2	2935	2808	3/2/17	3/4/17	Scaffold	"Institute of Oceanology, Chinese Academy of Sciences, Qingdao, China"	SAMN06212347	GCA_002009685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/685/GCA_002009685.1_ASM200968v1	-	HVEsp1
Bacteroides sp. 2_1_16	469587	PRJNA38347	38347	FCB group	Bacteroidetes/Chlorobi group	5.2363	43.2	-	ACPP01	18	4663	4463	10/23/09	5/18/17	Scaffold	Broad Institute	SAMN02463733	GCA_000162135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/135/GCA_000162135.1_ASM16213v1	-	2_1_16
Thioalkalivibrio sp. ALJ10	1158759	PRJNA176570	176570	Proteobacteria	Gammaproteobacteria	2.64436	65.2	-	ARIB01	14	2587	2470	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441014	GCA_000377305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/305/GCA_000377305.1_ASM37730v1	-	ALJ10
Ruminococcus sp. DSM 100440	1671366	PRJNA287085	287085	Terrabacteria group	Firmicutes	3.21214	45.2	-	LFIL01	44	3132	2956	3/16/16	3/28/16	Contig	Helsinki University	SAMN03776114	GCA_001593025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/025/GCA_001593025.1_ASM159302v1	26946362	DSM 100440
Nitrosomonas sp. Is79A3	261292	PRJNA52837	52837	Proteobacteria	Betaproteobacteria	3.78344	45.4	chromosome:NC_015731.1/CP002876.1	-	1	3531	3349	6/29/11	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02232044	GCA_000219585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/585/GCA_000219585.1_ASM21958v1	-	Is79A3
Thermotoga sp. TBGT1766	1230478	PRJNA175707	175707	Thermotogae	Thermotogae	1.73657	46.4	-	JSFI01	19	1808	1680	11/17/14	4/9/17	Contig	University of Alberta	SAMN03143098	GCA_000784825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/825/GCA_000784825.1_ASM78482v1	25500512	TBGT1766
Stenotrophomonas sp. RIT309	1470590	PRJNA239289	239289	Proteobacteria	Gammaproteobacteria	4.6348	66.5	-	JFYS01	45	4254	4135	4/14/14	4/9/17	Contig	Monash University Malaysia	SAMN02676627	GCA_000632045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/045/GCA_000632045.1_Willow_Endophyte_RIT309	24812212	RIT309
Pseudovibrio sp. Ad14	989397	PRJNA298121	298121	Proteobacteria	Alphaproteobacteria	6.20174	51.3	-	LMCD01	57	5679	5528	4/19/16	4/17/17	Contig	University College Cork	SAMN04147118	GCA_001623245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/245/GCA_001623245.1_ASM162324v1	27065959	Ad14
Pedobacter sp. Leaf41	1736218	PRJNA297956	297956	FCB group	Bacteroidetes/Chlorobi group	4.78047	37.8	-	LMLE01	13	4179	4043	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151598	GCA_001422545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/545/GCA_001422545.1_Leaf41	26633631	Leaf41
Carnobacterium sp. N15.MGS-251	1637505	PRJNA277012	277012	Terrabacteria group	Firmicutes	1.97784	39.3	-	LARI01	301	-	-	4/24/15	6/10/15	Contig	The Mayo Clinic	SAMN03450001	GCA_000980395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/395/GCA_000980395.1_ASM98039v1	26021920	-
Brevundimonas sp. KM4	1628191	PRJNA277254	277254	Proteobacteria	Alphaproteobacteria	3.0992	66.2	-	JZRG01	62	3074	2943	3/27/15	4/10/17	Contig	University of Malaya	SAMN03388692	GCA_000964075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/075/GCA_000964075.1_ASM96407v1	-	KM4
Cyanothece sp. ATCC 51472	860575	PRJNA59973	59973	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.46048	37.9	-	AGJC02	7	5079	4943	10/21/11	4/17/17	Contig	DOE Joint Genome Institute	SAMN02256525	GCA_000231425.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/425/GCA_000231425.3_ASM23142v3	-	ATCC 51472
Alcanivorax sp. NBRC 102024	1113895	PRJDB2892	248804	Proteobacteria	Gammaproteobacteria	3.73209	58.8	-	BDAS01	30	3421	3337	3/12/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00048769	GCA_001602235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/235/GCA_001602235.1_ASM160223v1	-	NBRC 102024
Eubacterium sp. An3	1965628	PRJNA377666	377666	Terrabacteria group	Firmicutes	4.23508	46.4	-	NFIR01	114	4103	3895	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473715	GCA_002159465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/465/GCA_002159465.1_ASM215946v1	-	An3
Geobacter sp. UBA2189	1961389	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	3.16109	46.9	-	DCVL01	67	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452577	GCA_002328035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/035/GCA_002328035.1_ASM232803v1	28894102	-
Janthinobacterium sp. RA13	1502762	PRJNA248506	248506	Proteobacteria	Betaproteobacteria	6.42126	62.5	-	JQNP01	1	5740	5573	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02800690	GCA_000745325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/325/GCA_000745325.1_ASM74532v1	25676775	RA13
Caulobacter sp. Root656	1736579	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	5.51584	68.7	-	LMHD01	48	5022	4866	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155848	GCA_001427685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/685/GCA_001427685.1_Root656	26633631	Root656
Maribacter sp. UBA849	1946806	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.4511	35.8	-	DBGR01	107	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450576	GCA_002295505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/505/GCA_002295505.1_ASM229550v1	28894102	-
Psychrobacter sp. P11G3	1699623	PRJNA292375	292375	Proteobacteria	Gammaproteobacteria	3.28286	42.8559	chromosome:NZ_CM003596.1/CM003596.1; plasmid pPspP11G3a:NZ_CM003597.1/CM003597.1; plasmid pPspP11G3b:NZ_CM003598.1/CM003598.1; plasmid pPspP11G3c:NZ_CM003599.1/CM003599.1; plasmid pPspP11G3d:NZ_CM003600.1/CM003600.1	LJCF01	5	2681	2583	11/4/15	4/11/17	Chromosome	Norwegian University of Science and Technology	SAMN03975701	GCA_001435845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/845/GCA_001435845.1_ASM143584v1	26879123	P11G3
Vulcanisaeta distributa DSM 14429	572478	PRJNA32589	32589	TACK group	Crenarchaeota	2.37414	45.4	chromosome:NC_014537.1/CP002100.1	-	1	2504	2420	9/22/10	8/21/15	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00017002	GCA_000148385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/385/GCA_000148385.1_ASM14838v1	21304741	DSM 14429
Roseobacter sp. MedPE-SWchi	1860089	PRJNA318731	318731	Proteobacteria	Alphaproteobacteria	2.78579	58.9	-	MPCZ01	18	2625	2585	11/10/16	11/10/16	Contig	University Miguel Hernandez	SAMN05219215	GCA_001874245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/245/GCA_001874245.1_ASM187424v1	27446036	-
Marinomonas sp. 42_23_T18	1856283	PRJNA320927	320927	Proteobacteria	Gammaproteobacteria	2.3386	41.3	-	MAAH01	628	2448	2379	5/31/17	5/31/17	Scaffold	Lawrence Berkeley National Lab	SAMN05179555	GCA_002163055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/055/GCA_002163055.1_ASM216305v1	28652349	-
Marinobacter sp. EN3	1397533	PRJNA217943	217943	Proteobacteria	Gammaproteobacteria	3.97973	57.4	-	AXCC01	106	3683	3556	10/21/13	4/9/17	Contig	University of Illinois at Chicago	SAMN02345638	GCA_000475315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/315/GCA_000475315.1_De_Novo_assembly	24356826	EN3
Polaribacter sp. Hel_I_88	1250006	PRJNA217200	217200	FCB group	Bacteroidetes/Chlorobi group	3.99653	30	-	JHZZ01	1	3469	3377	4/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743899	GCA_000687935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/935/GCA_000687935.1_ASM68793v1	-	Hel_I_88
Sulfitobacter sp. HI0023	1822225	PRJNA305749	305749	Proteobacteria	Alphaproteobacteria	4.30359	62.9	-	LWEQ01	652	4358	3916	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580764	GCA_001634785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/785/GCA_001634785.1_ASM163478v1	-	HI0023
Erythrobacter sp. CCH5-A1	1768792	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	4.03447	66.4	-	LSKQ01	326	3904	3717	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299493	GCA_001557115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/115/GCA_001557115.1_ASM155711v1	-	CCH5-A1
Epulopiscium sp. SCG-D08WGA-EpuloA1	1712377	PRJNA294498	294498	Terrabacteria group	Firmicutes	2.16176	30	-	LJHD01	316	1745	1574	2/2/17	2/2/17	Scaffold	King Abdullah University of Science and Technology (KAUST)	SAMN04038459	GCA_001983475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/475/GCA_001983475.1_ASM198347v1	-	-
Nocardioides sp. Root122	1736431	PRJNA297942	297942	Terrabacteria group	Actinobacteria	4.49019	71.8	-	LMDE01	16	4301	4196	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155700	GCA_001425025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/025/GCA_001425025.1_Root122	26633631	Root122
Paracoccus sp. WN007	2032623	PRJNA400671	400671	Proteobacteria	Alphaproteobacteria	3.67452	68.6	-	NSJZ01	187	3548	3321	9/6/17	9/8/17	Contig	"Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences"	SAMN07572621	GCA_002287065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/065/GCA_002287065.1_ASM228706v1	-	WN007
Candidatus Arthromitus sp. SFB-2	1054943	PRJNA68847	68847	Terrabacteria group	Firmicutes	1.13526	28.1	-	AFXS01	329	1386	1362	3/14/12	7/29/15	Contig	"Stanford University, Relman Lab"	SAMN00630893	GCA_000252685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/685/GCA_000252685.2_ASM25268v2	22434425	SFB-2
Amycolatopsis sp. JGI 0001006-E10	1286828	PRJNA187220	187220	Terrabacteria group	Actinobacteria	0.294779	67.5	-	AXXI01	41	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441430	GCA_000485095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/095/GCA_000485095.1_ASM48509v1	-	JGI 0001006-E10
Herbaspirillum sp. RV1423	1443993	PRJEB5087	238034	Proteobacteria	Betaproteobacteria	6.21086	59.2	-	CBXX01	131	5697	5470	2/11/14	4/9/17	Contig	GHENT UNIVERSITY	SAMEA3138933	GCA_000577615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/615/GCA_000577615.1_RV1423	-	RV1423
Methylobacterium sp. 10	1101191	PRJNA195835	195835	Proteobacteria	Alphaproteobacteria	4.98237	66.6	-	JAEV01	4	4607	4418	1/10/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02584938	GCA_000519085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/085/GCA_000519085.1_ASM51908v1	-	10
Citrobacter sp. S-77	1080067	PRJDB1659	253172	Proteobacteria	Gammaproteobacteria	5.24219	50.5	-	BAZH01	26	5072	4784	6/19/14	4/9/17	Scaffold	International Institute for Carbon-neutral Energy Research	SAMD00000559	GCA_000739675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/675/GCA_000739675.1_ASM73967v1	-	S-77
Anabaena sp. WA113	1710889	PRJNA294801	294801	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.69544	37.2	-	LJOS01	279	4268	4002	6/20/16	6/20/16	Contig	Oregon State University	SAMN04028825	GCA_001672155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/155/GCA_001672155.1_ASM167215v1	-	-
Treponema endosymbiont of Eucomonympha sp.	1580831	PRJDB3365	286024	Spirochaetes	Spirochaetia	1.1299	55.4	-	BBPZ01	698	-	-	6/5/15	10/6/15	Contig	"Microbe Division (RIKEN BRC JCM), RIKEN BioResource Center"	SAMD00023473	GCA_001028605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/605/GCA_001028605.1_ASM102860v1	25979941	E8
Novosphingobium sp. P6W	1609758	PRJNA274225	274225	Proteobacteria	Alphaproteobacteria	6.5373	63.7	-	JXZE01	65	5872	5611	2/17/15	4/10/17	Contig	Kazan Institute of Biochemistry and Biophysics RAS	SAMN03323925	GCA_000876675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/675/GCA_000876675.1_ASM87667v1	-	P6W
Methylophilus sp. Leaf416	1736373	PRJNA297956	297956	Proteobacteria	Betaproteobacteria	2.94034	48.2	-	LMQS01	8	2767	2697	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151763	GCA_001424665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/665/GCA_001424665.1_Leaf416	26633631	Leaf416
Lactobacillus sp. HMSC08B12	1581136	PRJNA269905	269905	Terrabacteria group	Firmicutes	1.96243	49.9	-	LWNA01	140	1943	1767	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03434242	GCA_001808415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/415/GCA_001808415.1_ASM180841v1	-	HMSC08B12
Enterococcus sp. HMSC056C08	1715038	PRJNA296165	296165	Terrabacteria group	Firmicutes	2.86012	37.8	-	LTKG01	289	2929	2747	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04495788	GCA_001809145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/145/GCA_001809145.1_ASM180914v1	-	HMSC056C08
Prevotella sp. MA2016	1408310	PRJNA223052	223052	FCB group	Bacteroidetes/Chlorobi group	3.38401	47.8	-	JHUW01	12	2778	2673	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02769640	GCA_000619825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/825/GCA_000619825.1_ASM61982v1	-	MA2016
Pantoea sp. YR343	1144341	PRJNA83107	83107	Proteobacteria	Gammaproteobacteria	5.31405	54.5	-	AKIT01	128	4875	4756	7/27/12	5/19/17	Contig	Oak Ridge National Lab	SAMN00839652	GCA_000282695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/695/GCA_000282695.1_Pantoea.strYR343_v1.0	23045501	YR343
Sulfurovum sp. PC08-66	1539063	PRJNA259227	259227	Proteobacteria	delta/epsilon subdivisions	2.11176	41.2	-	JQIQ01	120	2051	1936	1/29/15	1/29/15	Contig	Penn State	SAMN03002793	GCA_000830205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/205/GCA_000830205.1_ASM83020v1	25620962	-
Polaromonas sp. AER18D-145	1977060	PRJNA381359	381359	Proteobacteria	Betaproteobacteria	4.8224	63.5	-	NBZV01	135	-	-	9/27/17	9/27/17	Contig	UNIVERSITY OF SASKATCHEWAN	SAMN06675001	GCA_002379095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/095/GCA_002379095.1_ASM237909v1	-	AER18D-145
Vibrio parahaemolyticus RIMD 2210633	223926	PRJNA360	360	Proteobacteria	Gammaproteobacteria	5.16577	45.4	chromosome 1:NC_004603.1/BA000031.2; chromosome 2:NC_004605.1/BA000032.2	-	2	4991	4831	3/5/03	8/28/16	Complete Genome	Osaka Univ.	SAMD00058707	GCA_000196095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/095/GCA_000196095.1_ASM19609v1	"1,083,496,912,620,730"	O3:K6 substr. RIMD 2210633
Nocardiopsis sp. TSRI0078	1718951	PRJNA293172	293172	Terrabacteria group	Actinobacteria	6.10878	71.9	-	LWLB01	37	5373	5078	12/15/16	4/16/17	Scaffold	The Scripps Research Institute	SAMN04854774	GCA_001905145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/145/GCA_001905145.1_ASM190514v1	27999165	TSRI0078
Serratia sp. Leaf50	1736223	PRJNA297956	297956	Proteobacteria	Gammaproteobacteria	5.39059	50.8	-	LMLI01	21	4984	4830	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151603	GCA_001422565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/565/GCA_001422565.1_Leaf50	26633631	Leaf50
Thermococcus sp. JCM 11816	1295125	PRJDB830	243736	Euryarchaeota	Thermococci	2.11342	52.3	-	BBCU01	24	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000516	GCA_001316165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/165/GCA_001316165.1_ASM131616v1	-	JCM 11816
Bifidobacterium sp. 56_9_plus	1897062	PRJNA321218	321218	Terrabacteria group	Actinobacteria	1.87447	57.4	-	MNQA01	228	1706	1197	12/23/16	12/23/16	Scaffold	None	SAMN05717206	GCA_001915175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/175/GCA_001915175.1_ASM191517v1	27819664	-
Desulfocapsa sulfexigens DSM 10523	1167006	PRJNA91121	91121	Proteobacteria	delta/epsilon subdivisions	4.02351	45.389	chromosome:NC_020304.1/CP003985.1; plasmid unnamed:NC_020305.1/CP003986.1	-	2	3608	3522	2/20/13	4/17/17	Complete Genome	"Aarhus University, Aarhus, Denmark"	SAMN02602964	GCA_000341395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/395/GCA_000341395.1_ASM34139v1	-	DSM 10523
Streptococcus sp. oral taxon 071 str. 73H25AP	864570	PRJNA50521	50521	Terrabacteria group	Firmicutes	1.97652	41	-	AEEP01	7	1939	1842	8/24/10	4/17/17	Scaffold	Baylor College of Medicine	SAMN00260141	GCA_000146755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/146/755/GCA_000146755.1_ASM14675v1	-	73H25AP
Bradyrhizobium sp. G22	1839752	PRJEB10689	321395	Proteobacteria	Alphaproteobacteria	9.09136	63.688	chromosome I:NZ_LN907826.1/LN907826.1	CZWJ01	20	8606	8188	5/12/16	4/17/17	Chromosome	ROTHAMSTED RESEARCH	SAMEA3648508	GCA_900011265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/265/GCA_900011265.1_G22.v1	-	-
Shewanella sp. HN-41	327275	PRJNA66317	66317	Proteobacteria	Gammaproteobacteria	4.41403	46.5	-	AFOZ01	47	3936	3626	6/10/11	5/19/17	Contig	Gwangju Institute of Science and Technology	SAMN02469863	GCA_000217915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/915/GCA_000217915.2_ASM21791v1	21868804	HN-41
Nocardia sp. 852002-51244_SCH5132740	1834099	PRJNA305922	305922	Terrabacteria group	Actinobacteria	7.69003	67.9	-	LZSP01	297	7105	6758	6/17/16	4/13/17	Contig	JCVI	SAMN04691940	GCA_001665525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/525/GCA_001665525.1_ASM166552v1	-	852002-51244_SCH5132740
Nostoc sp. 106C	1932667	PRJNA360305	360305	Terrabacteria group	Cyanobacteria/Melainabacteria group	8.66273	41.3	-	MTAW01	241	7104	6698	5/22/17	5/24/17	Contig	CINVESTAV-Langebio	SAMN06208961	GCA_002154725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/725/GCA_002154725.1_ASM215472v1	-	106C
Escherichia sp. KTE96	1182697	PRJNA164937	164937	Proteobacteria	Gammaproteobacteria	4.60849	50.4	-	ASVD01	4	4650	4375	5/31/13	2/22/17	Scaffold	Broad Institute	SAMN00854649	GCA_000408525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/525/GCA_000408525.1_Esch_coli_KTE96_V1	-	KTE96
Moraxella bovoculi	386891	PRJNA282717	282717	Proteobacteria	Gammaproteobacteria	2.24362	45.3722	chromosome:NZ_CP011374.1/CP011374.1; plasmid unnamed:NZ_CP011375.1/CP011375.1	-	2	2139	1992	5/6/15	4/3/17	Complete Genome	USDA	SAMN03577769	GCA_000988605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/605/GCA_000988605.1_ASM98860v1	-	58069
Corynebacterium sp. KPL1989	1203622	PRJNA170362	170362	Terrabacteria group	Actinobacteria	2.31786	55.3	-	AXLR01	3	2084	1954	10/21/13	4/17/17	Scaffold	Broad Institute	SAMN02596998	GCA_000477955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/955/GCA_000477955.1_Cory_sp_KPL1989_V1	-	KPL1989
Staphylococcus sp. HMSC10C03	1581078	PRJNA269847	269847	Terrabacteria group	Firmicutes	2.73477	35.7	-	LTZX01	90	2623	2511	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03287008	GCA_001807805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/805/GCA_001807805.1_ASM180780v1	-	HMSC10C03
Paenibacillus polymyxa	1406	PRJNA269241	269241	Terrabacteria group	Firmicutes	5.82924	45.3651	chromosome:NZ_CP010268.1/CP010268.1; plasmid pSb31l:NZ_CP010270.1/CP010270.1; plasmid pSb31s:NZ_CP010269.1/CP010269.1	-	3	5144	4829	1/16/15	4/3/17	Complete Genome	Graz University of Technology	SAMN03253097	GCA_000819665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/665/GCA_000819665.1_ASM81966v1	25767224	Sb3-1
Vibrio parahaemolyticus	670	PRJNA280138	280138	Proteobacteria	Gammaproteobacteria	5.28996	45.347	chromosome 1:NZ_CP011406.1/CP011406.1; chromosome 2:NZ_CP011407.1/CP011407.1; plasmid pFORC14:NZ_CP011408.1/CP011408.1	-	3	5136	4845	5/2/16	3/20/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN03457164	GCA_001636035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/035/GCA_001636035.1_ASM163603v1	-	FORC_014
Leptolyngbya sp. KIOST-1	1229172	PRJNA257685	257685	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.32012	59.4	-	JQFA01	13	5717	5470	10/3/14	4/9/17	Contig	Korea Institute of Ocean Science & Technology	SAMN02953965	GCA_000763385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/385/GCA_000763385.1_ASM76338v1	-	KIOST-1
Nitrosomonas sp. Nm166	1881054	PRJEB17241	351429	Proteobacteria	Betaproteobacteria	3.20514	45.2	-	FONE01	126	3003	2794	10/30/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05428977	GCA_900112825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/825/GCA_900112825.1_IMG-taxon_2675903035_annotated_assembly	-	Nm166
Ruegeria sp. PBVC088	1858797	PRJNA324753	324753	Proteobacteria	Alphaproteobacteria	5.78253	65	-	LZNT01	143	5686	5421	9/1/16	4/13/17	Contig	UMS	SAMN05214263	GCA_001717995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/995/GCA_001717995.1_ASM171799v1	-	PBVC088
Vibrio vulnificus	672	PRJNA320042	320042	Proteobacteria	Gammaproteobacteria	6.06796	45.3368	chromosome 1:NZ_CP015512.1/CP015512.1; chromosome 2:NZ_CP015513.1/CP015513.1; plasmid unnamed:NZ_CP015514.1/CP015514.1	-	3	5917	5565	5/2/17	5/6/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN04914658	GCA_002117205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/205/GCA_002117205.1_ASM211720v1	-	FORC_036
Sphingomonas sp. SKA58	314266	PRJNA13584	13584	Proteobacteria	Alphaproteobacteria	3.95574	63.2	-	AAQG01	5	3829	3640	4/28/06	4/17/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436131	GCA_000153545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/545/GCA_000153545.1_ASM15354v1	-	SKA58
Clostridium sp. D5	556261	PRJNA32459	32459	Terrabacteria group	Firmicutes	5.42732	45.5	-	ADBG01	47	4686	4528	2/23/11	5/18/17	Scaffold	Broad Institute	SAMN02463701	GCA_000190355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/355/GCA_000190355.1_ASM19035v1	-	D5
Vibrio parahaemolyticus O1:K33 str. CDC_K4557	1338032	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.13858	45.3352	chromosome I:NC_021848.1/CP006008.1; chromosome II:NC_021822.1/CP006007.1	-	2	4924	4665	7/16/13	3/24/17	Complete Genome	University of California at Davis	SAMN02179884	GCA_000430425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/425/GCA_000430425.1_ASM43042v1	25814612	CDC_K4557
Frankia sp. CpI1-P	1502734	PRJNA248467	248467	Terrabacteria group	Actinobacteria	7.61955	72.3	-	LJJX01	143	6406	5822	10/30/15	8/28/17	Scaffold	University of New Hampshire	SAMN02798501	GCA_001421075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/075/GCA_001421075.1_ASM142107v1	-	CpI1-P
Flavobacterium sp. Root901	1736605	PRJNA297942	297942	FCB group	Bacteroidetes/Chlorobi group	4.98633	34.2	-	LMJB01	12	4311	4191	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155874	GCA_001429765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/765/GCA_001429765.1_Root901	26633631	Root901
Klebsiella sp. AA405	1734033	PRJNA295946	295946	Proteobacteria	Gammaproteobacteria	5.47354	57.3	-	LKKX01	96	5547	5222	10/9/15	8/28/17	Scaffold	Klebsiella sp.	SAMN04094116	GCA_001308905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/308/905/GCA_001308905.1_ASM130890v1	-	AA405
Bacillus safensis	561879	PRJNA276062	276062	Terrabacteria group	Firmicutes	3.67614	41.7	-	JYKW01	93	3779	3605	3/2/15	4/3/17	Contig	Monash University Malaysia	SAMN03365872	GCA_000935315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/315/GCA_000935315.1_Bac_saf_RIT372_v1	25883290	RIT372
Acinetobacter sp. CIP A162	1144674	PRJNA183333	183333	Proteobacteria	Gammaproteobacteria	3.36406	43	-	APOG01	7	3273	3043	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01087911	GCA_000367905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/905/GCA_000367905.1_Acin_sp_CIP_A162_V1	-	CIP A162
Oribacterium sp. KHPX15	1855342	PRJEB16648	349934	Terrabacteria group	Firmicutes	4.01775	42.2	-	FNRG01	88	3498	3294	10/22/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216349	GCA_900107835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/835/GCA_900107835.1_IMG-taxon_2657244910_annotated_assembly	-	KHPX15
Bordetella holmesii 70147	1247647	PRJNA178407	178407	Proteobacteria	Betaproteobacteria	3.76689	62.6	-	JDSJ01	9	3733	2997	2/14/14	4/2/17	Contig	Institute for Genome Sciences	SAMN02190088	GCA_000571995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/995/GCA_000571995.1_gbhBH004	-	70147
Paeniclostridium sordellii	1505	PRJEB8124	277649	Terrabacteria group	Firmicutes	3.53612	27.4	-	CELE01	28	3443	3336	3/13/15	4/4/17	Contig	WTSI	SAMEA1572107	GCA_001372375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/375/GCA_001372375.1_R30684	-	R30684
Vibrio parahaemolyticus	670	PRJNA261558	261558	Proteobacteria	Gammaproteobacteria	5.0941	45.3349	chromosome 1:NZ_CP009765.1/CP009765.1; chromosome 2:NZ_CP009766.1/CP009766.1	-	2	5017	4707	10/1/15	3/18/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN03140318	GCA_001304775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/775/GCA_001304775.1_ASM130477v1	-	FORC_006
Vibrio parahaemolyticus BB22OP	1211705	PRJNA170885	170885	Proteobacteria	Gammaproteobacteria	5.10352	45.3292	chromosome 1:NC_019955.1/CP003972.1; chromosome 2:NC_019971.1/CP003973.1	-	2	4888	4642	12/21/12	5/19/17	Complete Genome	Virginia Tech	SAMN02604302	GCA_000328405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/405/GCA_000328405.1_ASM32840v1	23469330	BB22OP
Staphylococcus equorum	246432	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.89977	33	-	LNNB01	46	2801	2734	9/28/16	4/5/17	Contig	Tufts University	SAMN04244255	GCA_001747895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/895/GCA_001747895.1_ASM174789v1	-	BC9
Bradyrhizobium elkanii CCBAU 43297	1128204	PRJNA77219	77219	Proteobacteria	Alphaproteobacteria	9.3477	63.7	-	AJPW01	654	9092	8193	5/3/12	5/18/17	Contig	China Agricultural University	SAMN02469464	GCA_000261525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/525/GCA_000261525.1_43297	22586130	CCBAU 43297
Alcaligenes faecalis subsp. faecalis NBRC 13111	1218102	PRJDB275	172098	Proteobacteria	Betaproteobacteria	4.03369	56.7	-	BBJQ01	29	3751	3660	8/2/14	4/2/17	Contig	National Institute of Technology and Evaluation	SAMD00000359	GCA_000739855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/855/GCA_000739855.1_ASM73985v1	-	NBRC 13111
Vibrio parahaemolyticus O1:Kuk str. FDA_R31	1338034	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.22356	45.3287	chromosome I:NC_021847.1/CP006004.1; chromosome II:NC_021821.1/CP006005.1	-	2	5026	4716	7/16/13	3/24/17	Complete Genome	University of California at Davis	SAMN02179882	GCA_000430405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/405/GCA_000430405.1_ASM43040v1	25814612	FDA_R31
Serratia plymuthica A30	1206776	PRJNA170007	170007	Proteobacteria	Gammaproteobacteria	5.55402	56.1	-	AMSV01	78	5317	5098	10/2/12	5/19/17	Contig	Plant Research International	SAMN02470813	GCA_000300895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/895/GCA_000300895.1_ASM30089v1	23209245	A30
Pseudomonas fuscovaginae	50340	PRJNA263430	263430	Proteobacteria	Gammaproteobacteria	6.7307	63.3	-	JTBY01	615	6364	5539	9/18/15	4/4/17	Scaffold	IRRI	SAMN03100371	GCA_001293475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/475/GCA_001293475.1_ASM129347v1	26422147	IRRI 7007
Pseudomonas chlororaphis	587753	PRJEB16421	349353	Proteobacteria	Gammaproteobacteria	7.12059	62.9	chromosome I:NZ_LT629747.1/LT629747.1	-	1	6458	6244	10/21/16	4/5/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489802	GCA_900104985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/985/GCA_900104985.1_IMG-taxon_2636416019_annotated_assembly	-	LMG 21630
Enterococcus cecorum	44008	PRJNA284231	284231	Terrabacteria group	Firmicutes	2.33782	36.3	-	LDEA01	47	2315	2176	6/8/15	4/3/17	Contig	Warsaw University of Life Sciences (SGGW)	SAMN03699967	GCA_001021745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/745/GCA_001021745.1_ASM102174v1	26383654	CL-1
Vibrio cyclitrophicus 1F111	1136159	PRJNA81859	81859	Proteobacteria	Gammaproteobacteria	5.22961	43.4	-	AHTI02	159	4617	4312	2/7/12	4/5/17	Scaffold	Massachusetts Institute of Technology	SAMN02470464	GCA_000247005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/005/GCA_000247005.2_ASM24700v2	22491847	1F111
Pseudomonas fragi	296	PRJNA397499	397499	Proteobacteria	Gammaproteobacteria	5.21598	58.1	-	NQKL01	77	4903	4719	8/24/17	8/27/17	Contig	CSIRO Agriculture and Food	SAMN07459811	GCA_002269055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/055/GCA_002269055.1_ASM226905v1	-	F1820
Megasphaera elsdenii	907	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.59234	53.4	-	DBPE01	171	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450712	GCA_002299745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/745/GCA_002299745.1_ASM229974v1	28894102	-
Lactobacillus mucosae	97478	PRJEB17416	351593	Terrabacteria group	Firmicutes	1.88276	46.7	-	FOSI01	38	1851	1695	10/31/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216461	GCA_900114225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/225/GCA_900114225.1_IMG-taxon_2654588122_annotated_assembly	-	KHPX11
Cronobacter malonaticus	413503	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.42351	57	-	MSAF01	100	4293	4068	12/28/16	4/6/17	Contig	FDA/CFSAN	SAMN06100263	GCA_001922875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/875/GCA_001922875.1_ASM192287v1	-	MOD1-Md99g
Pseudoalteromonas luteoviolacea H33	1365251	PRJNA213493	213493	Proteobacteria	Gammaproteobacteria	6.11736	42	-	AUXZ01	151	5079	4926	4/22/16	4/5/17	Contig	Technical University of Denmark	SAMN02250935	GCA_001625585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/625/585/GCA_001625585.1_ASM162558v1	-	H33
Vibrio parahaemolyticus	670	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.15243	45.3276	chromosome 1:NZ_CP014046.1/CP014046.1; chromosome 2:NZ_CP014047.1/CP014047.1	-	2	4953	4652	2/11/16	3/19/17	Complete Genome	US Food and Drug Administration 	SAMN03996250	GCA_001558495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/495/GCA_001558495.1_ASM155849v1	-	ATCC 17802
Pseudomonas monteilii	76759	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	5.54728	60.4	-	BCAO01	149	5313	5064	10/3/15	4/4/17	Contig	National Institute of Technology and Evaluation	SAMD00031680	GCA_001319945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/945/GCA_001319945.1_ASM131994v1	-	GTC 10897
Streptomyces acidiscabies	42234	PRJDB4008	287593	Terrabacteria group	Actinobacteria	10.7254	70.6	-	BCMK01	278	9614	9005	12/23/15	3/12/17	Scaffold	"Plant Pathology and Entomology, Kagoshima Institute for Agricultural Development"	SAMD00034892	GCA_001485105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/105/GCA_001485105.1_ASM148510v1	26941144	a10
Vibrio parahaemolyticus UCM-V493	1429044	PRJNA229758	229758	Proteobacteria	Gammaproteobacteria	5.23257	45.3212	chromosome 1:NZ_CP007004.1/CP007004.1; chromosome 2:NZ_CP007005.1/CP007005.1; plasmid pVPUCMV:NZ_CP007006.1/CP007006.1	-	3	5080	4795	2/12/14	3/16/17	Complete Genome	University of Delaware	SAMN03081521	GCA_000568495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/495/GCA_000568495.1_ASM56849v1	24625868	UCM-V493
Wolbachia pipientis	955	PRJNA407640	407640	Proteobacteria	Alphaproteobacteria	1.51774	33.9	-	NWVI01	177	1503	1303	9/27/17	9/27/17	Scaffold	New Mexico State University	SAMN07666453	GCA_002374845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/374/845/GCA_002374845.1_ASM237484v1	-	HN2016
Rhodococcus rhodochrous	1829	PRJEB12154	306581	Terrabacteria group	Actinobacteria	4.87101	70.2	-	FBUK01	173	4594	3147	1/4/16	4/11/17	Contig	FIOCRUZ-MG	SAMEA3717935	GCA_001511235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/235/GCA_001511235.1_Rhodococcus_rhodochrous_TRN7	-	-
Pseudomonas psychrotolerans	237610	PRJNA278256	278256	Proteobacteria	Gammaproteobacteria	5.3265	64.7	-	LDSS01	136	4836	4657	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401421	GCA_001476825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/825/GCA_001476825.1_ASM147682v1	26793183	NS376
Xanthomonas arboricola pv. pruni	69929	PRJNA243321	243321	Proteobacteria	Gammaproteobacteria	5.10066	65.4	-	JHUQ01	474	4417	3788	5/6/14	4/11/17	Contig	INIA	SAMN02715732	GCA_000685175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/175/GCA_000685175.1_Xap33-1.0	24903863	Xap33
Salinispora pacifica CNQ768	1169193	PRJNA175182	175182	Terrabacteria group	Actinobacteria	5.48084	69.9	-	ARHI01	91	5119	4769	4/19/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02440452	GCA_000375225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/225/GCA_000375225.1_ASM37522v1	-	CNQ768
Leptospira kirschneri str. 2008720114	1193049	PRJNA167226	167226	Spirochaetes	Spirochaetia	4.39177	35.9	-	AKXD02	51	3989	3591	10/17/12	5/18/17	Contig	J. Craig Venter Institute	SAMN02436489	GCA_000306175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/175/GCA_000306175.2_gls454018v2.0	-	2008720114
Xanthomonas vasicola	56459	PRJNA264627	264627	Proteobacteria	Gammaproteobacteria	4.80507	63.4	-	JSBX01	67	4375	3820	11/6/14	4/2/17	Scaffold	University of Exeter	SAMN03140173	GCA_000772725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/725/GCA_000772725.1_NCPPB1396v1	-	NCPPB 1396
Lactobacillus brevis	1580	PRJNA313253	313253	Terrabacteria group	Firmicutes	2.88201	45.3107	chromosome:NZ_CP019743.1/CP019743.1; plasmid pl12111-1:NZ_CP019744.1/CP019744.1; plasmid pl12111-2:NZ_CP019745.1/CP019745.1; plasmid pl12111-3:NZ_CP019746.1/CP019746.1; plasmid pl12111-4:NZ_CP019747.1/CP019747.1; plasmid pl12111-5:NZ_CP019748.1/CP019748.1; plasmid pl12111-6:NZ_CP019749.1/CP019749.1	-	7	2877	2508	5/2/17	8/4/17	Complete Genome	Technische Universitaet Muenchen	SAMN04517636	GCA_002117375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/375/GCA_002117375.1_ASM211737v1	-	TMW 1.2111
Vibrio gazogenes	687	PRJNA354876	354876	Proteobacteria	Gammaproteobacteria	4.78655	45.3086	chromosome 1:NZ_CP018835.1/CP018835.1; chromosome 2:NZ_CP018836.1/CP018836.1; plasmid unnamed1:NZ_CP018837.1/CP018837.1	-	3	4296	4112	6/15/17	6/19/17	Complete Genome	University of South carolina	SAMN06053751	GCA_002196515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/515/GCA_002196515.1_ASM219651v1	-	ATCC 43942
Carnobacterium maltaromaticum	2751	PRJEB8756	378834	Terrabacteria group	Firmicutes	3.55957	34.4	-	CVMZ01	160	3372	3199	3/10/17	5/31/17	Contig	UNIV-LORRAINE	SAMEA3335284	GCA_900005785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/005/785/GCA_900005785.1_ASM90000578v1	-	18-Mar
Enterococcus mundtii	53346	PRJNA337899	337899	Terrabacteria group	Firmicutes	3.29658	38.4	-	MCRG01	166	3047	2901	8/15/16	4/5/17	Scaffold	Zhejiang University	SAMN05513637	GCA_001705215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/215/GCA_001705215.1_ASM170521v1	-	SL_16
Rhodococcus fascians 02-816c	1443889	PRJNA233522	233522	Terrabacteria group	Actinobacteria	6.08414	64.6	-	JMFE01	45	5830	5674	9/30/14	4/2/17	Scaffold	Oregon State University	SAMN02569986	GCA_000760855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/855/GCA_000760855.1_R_fas_02-816c	-	02-816c
Flavobacterium columnare	996	PRJNA360885	360885	FCB group	Bacteroidetes/Chlorobi group	3.09446	30.8	-	MTDC01	423	2766	2551	6/22/17	6/24/17	Contig	"Faculty of Veterinary Science, Chulalongkorn University"	SAMN06216426	GCA_002204825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/825/GCA_002204825.1_ASM220482v1	28624550	CF1
Rhodococcus pyridinivorans JCM 10940 = NBRC 100608	1303690	PRJDB948	245266	Terrabacteria group	Actinobacteria	3.65163	66.2	-	BBGG01	2305	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016920	GCA_001313645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/645/GCA_001313645.1_ASM131364v1	-	JCM 10940
Campylobacter lanienae	75658	PRJNA341006	341006	Proteobacteria	delta/epsilon subdivisions	1.62965	34.6	-	MJJX01	88	1669	1581	5/15/17	9/19/17	Contig	USDA	SAMN05687026	GCA_002139425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/425/GCA_002139425.1_ASM213942v1	28854596	RM10079
Enterococcus durans	53345	PRJNA342049	342049	Terrabacteria group	Firmicutes	2.93121	37.9	-	MJEE01	43	2788	2588	4/3/17	4/5/17	Contig	Lethbridge Research Centre	SAMN05735028	GCA_002077535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/535/GCA_002077535.1_ASM207753v1	28270110	F0321E 104
Neorhizobium galegae bv. orientalis	323655	PRJEB6976	282473	Proteobacteria	Alphaproteobacteria	6.85803	61.3	-	CCRM01	148	6695	6397	4/29/15	4/3/17	Contig	UH	SAMEA2698479	GCA_000985995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/995/GCA_000985995.1_NgalHAMBI2605Draft	-	-
Raoultella planticola	575	PRJNA311932	311932	Proteobacteria	Gammaproteobacteria	6.01184	55.5	-	LSUW01	77	5917	5620	6/15/16	4/5/17	Scaffold	National Institute of Health Dr Ricardo Jorge	SAMN04497994	GCA_001663325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/325/GCA_001663325.1_ASM166332v1	-	INSali133
Acinetobacter ursingii	108980	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.5076	40.1	-	BCMC01	91	3308	3159	12/2/15	4/5/17	Contig	National Institute of Technology and Evaluation	SAMD00019903	GCA_001485045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/045/GCA_001485045.1_ASM148504v1	-	GTC 3702
Pseudomonas viridiflava	33069	PRJNA263532	263532	Proteobacteria	Gammaproteobacteria	5.91364	59.4	-	JRXH01	188	5333	5188	10/2/15	4/4/17	Contig	CSIR-Institute of Microbial Technology	SAMN03103695	GCA_001305955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/305/955/GCA_001305955.1_ASM130595v1	-	DSM 6694
Leclercia adecarboxylata	83655	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.77323	56.7	-	DBBH01	85	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457230	GCA_002292135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/135/GCA_002292135.1_ASM229213v1	28894102	-
Bacillus simplex	1478	PRJNA347338	347338	Terrabacteria group	Firmicutes	5.44375	40.5	-	MKYS01	100	5247	4985	9/8/17	9/11/17	Contig	University of Copenhagen	SAMN05879143	GCA_002287755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/755/GCA_002287755.1_ASM228775v1	-	313
Flavonifractor plautii	292800	PRJEB10915	297013	Terrabacteria group	Firmicutes	4.25018	58.5	-	CYZT01	1195	4365	4319	10/1/15	5/19/16	Contig	SC	SAMEA3545262	GCA_001404915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/915/GCA_001404915.1_13414_6_38	-	2789STDY5608854
Anaerostipes hadrus	649756	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.28273	36.9	-	CYXT01	62	3320	3135	10/1/15	4/4/17	Contig	SC	SAMEA3545276	GCA_001405715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/715/GCA_001405715.1_13414_6_52	-	2789STDY5608868
Moraxella ovis	29433	PRJNA280058	280058	Proteobacteria	Gammaproteobacteria	2.3061	45.3015	chromosome:NZ_CP011158.1/CP011158.1; plasmid pMOV1:NZ_CP011159.1/CP011159.1	-	2	2224	2085	5/2/16	4/17/17	Complete Genome	University of Missouri - Columbia	SAMN03455375	GCA_001636015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/015/GCA_001636015.1_ASM163601v1	-	199/55
Staphylococcus xylosus	1288	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.74794	32.7	-	LNPE01	35	2561	2507	9/28/16	4/5/17	Contig	Tufts University	SAMN04244266	GCA_001747725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/725/GCA_001747725.1_ASM174772v1	-	22B
Vibrio campbellii HY01	410291	PRJNA17467	17467	Proteobacteria	Gammaproteobacteria	5.41538	45.5	-	AAWP01	205	5073	4606	1/10/07	5/19/17	Scaffold	TIGR	SAMN02435842	GCA_000154025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/025/GCA_000154025.1_ASM15402v1	-	HY01
Mycobacterium chelonae	1774	PRJNA347845	347845	Terrabacteria group	Actinobacteria	5.11888	64	-	MLIG01	27	5066	4946	10/26/16	4/5/17	Contig	University of Georgia	SAMN05897988	GCA_001853665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/665/GCA_001853665.1_ASM185366v1	-	B20_S13
Clostridium pasteurianum DSM 525 = ATCC 6013	1262449	PRJNA182388	182388	Terrabacteria group	Firmicutes	4.3869	29.9	-	JPGY02	2	4079	3856	7/8/14	4/4/17	Contig	Oak Ridge National Laboratory	SAMN01821297	GCA_000724205.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/205/GCA_000724205.3_ASM72420v3	25103768	ATCC 6013
Actinomyces naeslundii	1655	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.22849	67.6	-	MSKX01	58	2761	2579	1/5/17	4/6/17	Scaffold	King's College London	SAMN05898716	GCA_001937735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/735/GCA_001937735.1_ASM193773v1	-	WE6B-3
Tannerella forsythia	28112	PRJEB15383	345086	FCB group	Bacteroidetes/Chlorobi group	3.25289	47.1	-	FMMM01	93	2710	2550	10/1/16	6/12/17	Scaffold	UNIVERSITY OF SHEFFIELD	SAMEA4441423	GCA_900096735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/096/735/GCA_900096735.1_TFUB20	-	UB20
Prevotella intermedia	28131	PRJNA281562	281562	FCB group	Bacteroidetes/Chlorobi group	2.67316	43.5	-	LBGT01	55	2335	2176	3/21/16	4/5/17	Scaffold	Kyung Hee University	SAMN03494306	GCA_001594285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/285/GCA_001594285.1_ASM159428v1	-	ATCC 49046
Geobacillus sp. G11MC16	495036	PRJNA28341	28341	Terrabacteria group	Firmicutes	3.54519	48.8	-	ABVH01	31	3606	3277	8/15/08	4/18/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN02441802	GCA_000173035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/035/GCA_000173035.1_ASM17303v1	-	G11MC16
Cutibacterium avidum	33010	PRJNA298219	298219	Terrabacteria group	Actinobacteria	2.46279	63.4	-	LLJJ01	14	2281	2129	11/4/16	4/5/17	Contig	Aarhus University	SAMN04156673	GCA_001866585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/585/GCA_001866585.1_ASM186658v1	27355425	T15
Streptococcus sobrinus TCI-53	1074057	PRJNA71883	71883	Terrabacteria group	Firmicutes	2.07282	43.5	-	AGGG01	359	2100	1847	10/6/11	3/30/17	Contig	JCVI	SAMN02436617	GCA_000227885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/885/GCA_000227885.2_SMUT1-NEX_6-53	-	TCI-53
Morganella morganii H1r	1416758	PRJNA226209	226209	Proteobacteria	Gammaproteobacteria	4.51219	50.1	-	AYMP01	118	4444	4225	4/18/14	4/2/17	Contig	University of Malaya	SAMN02729859	GCA_000633515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/515/GCA_000633515.1_de_novo	-	H1r
Acidithiobacillus thiooxidans	930	PRJNA319302	319302	Proteobacteria	Acidithiobacillia	3.8317	53.1	-	LWSD01	371	4176	3737	8/16/16	4/5/17	Contig	Central South University	SAMN04884704	GCA_001705755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/755/GCA_001705755.1_ASM170575v1	27548157	JYC-17
Pediococcus damnosus	51663	PRJNA309620	309620	Terrabacteria group	Firmicutes	1.88914	38.1	-	LTEA01	247	1829	1677	5/2/16	4/5/17	Scaffold	South China University of Technology	SAMN04437152	GCA_001636135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/135/GCA_001636135.1_ASM163613v1	-	BM-PD14610
Agrobacterium rhizogenes	359	PRJNA247564	247564	Proteobacteria	Alphaproteobacteria	6.54433	60.1	-	JUHG01	20	6174	6025	12/9/14	4/2/17	Contig	DOE Joint Genome Institute	SAMN02787122	GCA_000799715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/715/GCA_000799715.1_ASM79971v1	-	OV677
Staphylococcus sciuri	1296	PRJNA278417	278417	Terrabacteria group	Firmicutes	2.8813	32.4	-	LDTN01	117	2913	2791	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401357	GCA_001477335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/335/GCA_001477335.1_ASM147733v1	26793183	NS36
Lactobacillus curvatus CRL 705	1074451	PRJNA71471	71471	Terrabacteria group	Firmicutes	1.83836	41.9	-	AGBU01	145	1848	1722	10/26/11	3/30/17	Contig	CERELOMICS	SAMN02469461	GCA_000235705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/705/GCA_000235705.2_ASM23570v1	22207745	CRL 705
Selenomonas ruminantium	971	PRJEB15683	347454	Terrabacteria group	Firmicutes	3.64435	52.2	-	FNWN01	75	3387	3182	10/27/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216583	GCA_900108415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/415/GCA_900108415.1_IMG-taxon_2654588177_annotated_assembly	-	KH1T6
Hafnia alvei	569	PRJNA236111	236111	Proteobacteria	Gammaproteobacteria	4.74205	48.7	-	LAZG01	64	4413	4242	4/24/15	4/3/17	Contig	University of Malaya	SAMN03466610	GCA_000980975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/975/GCA_000980975.1_ASM98097v1	-	ATCC 29926
Enterococcus hirae	1354	PRJNA289061	289061	Terrabacteria group	Firmicutes	2.99866	36.6	-	LGAO01	46	2824	2652	9/9/15	4/4/17	Contig	Institute of Experimental Medicine	SAMN03840868	GCA_001280825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/825/GCA_001280825.1_ASM128082v1	-	19m
Weissella cibaria	137591	PRJNA395775	395775	Terrabacteria group	Firmicutes	2.34285	45.3	chromosome:NZ_CP022606.1/CP022606.1	-	1	2176	2024	8/8/17	8/10/17	Complete Genome	"Oradentics Co., Ltd."	SAMN07414780	GCA_002243305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/305/GCA_002243305.1_ASM224330v1	-	CMS1
Vibrio nigripulchritudo AM115	1238430	PRJEB551	222437	Proteobacteria	Gammaproteobacteria	6.34426	45.9	-	CANT01	208	5715	5622	10/1/13	4/3/17	Contig	Genoscope CEA	SAMEA3146250	GCA_001050595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/595/GCA_001050595.1_ASM105059v1	23739050	AM115
Mycobacterium canettii CIPT 140070013	1246121	PRJEB586	184399	Terrabacteria group	Actinobacteria	4.3416	65.5	-	CAON01	542	4278	3916	12/19/12	5/19/17	Contig	Institut Pasteur	SAMEA2272417	GCA_000343915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/915/GCA_000343915.1_ASM34391v1	23291586	CIPT 140070013
Pantoea agglomerans IG1	1110694	PRJDB7	78137	Proteobacteria	Gammaproteobacteria	4.82958	55	-	BAEF01	18	4528	4381	11/30/11	5/19/17	Contig	"Department of Bioscience and Biotechnology, Faculty of Agriculture, Kyusyu University"	SAMD00036596	GCA_000241285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/285/GCA_000241285.2_ASM24128v2	-	IG1
Mycobacterium africanum MAL010071	1354162	PRJNA211631	211631	Terrabacteria group	Actinobacteria	4.38584	65.6	-	JLAY01	4	4241	4036	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02231100	GCA_000666205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/205/GCA_000666205.1_Myco_afri_MAL010071_V1	-	MAL010071
Brevibacillus laterosporus	1465	PRJNA328965	328965	Terrabacteria group	Firmicutes	5.23379	41.1	-	MBFH01	64	4710	4451	7/29/16	4/13/17	Scaffold	Università di Sassari	SAMN05386400	GCA_001696705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/705/GCA_001696705.1_ASM169670v1	-	Uniss_18
Mycobacterium colombiense	339268	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.63561	67.5	-	LZKX01	406	5483	5015	6/17/16	4/10/17	Contig	JCVI	SAMN05202162	GCA_001673015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/015/GCA_001673015.1_ASM167301v1	-	1245759.5
Melissococcus plutonius	33970	PRJNA263540	263540	Terrabacteria group	Firmicutes	2.07732	31.1	-	JSAY01	8	1838	1616	7/7/15	4/3/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03103707	GCA_001047455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/455/GCA_001047455.1_ASM104745v1	-	21.1
Haemophilus haemolyticus	726	PRJNA282658	282658	Proteobacteria	Gammaproteobacteria	1.87616	38.2	-	LCTH01	63	1848	1705	5/15/15	4/3/17	Contig	University of Iowa	SAMN03573714	GCA_001008275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/275/GCA_001008275.1_ASM100827v1	-	27P25
Gallibacterium anatis	750	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.43519	39.8	-	JPXU01	92	2292	2152	11/4/14	4/2/17	Contig	University of Copenhagen	SAMN02900759	GCA_000771855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/855/GCA_000771855.1_ASM77185v1	-	Gerl.4224/88
Pseudomonas brassicacearum	930166	PRJNA236566	236566	Proteobacteria	Gammaproteobacteria	6.78944	60.8	-	JBON01	8	6180	6012	12/10/14	4/2/17	Scaffold	CNRS - UPR2355	SAMN03196958	GCA_000800585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/585/GCA_000800585.1_PseuPA1G7_1.0	25635020	PA1G7
Leptospira noguchii str. Cascata	1193054	PRJNA167238	167238	Spirochaetes	Spirochaetia	4.54779	35.7	-	AOUB01	338	4227	3737	4/3/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01162017	GCA_000350585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/585/GCA_000350585.1_gls454073v01	-	Cascata
Leptospira weilii	28184	PRJNA257145	257145	Spirochaetes	Spirochaetia	4.28932	40.7	-	JQRQ01	355	4265	3885	2/24/16	4/5/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947789	GCA_001568405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/405/GCA_001568405.1_ASM156840v1	26833181	56622
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98899	64.1	-	FVBB01	23	4948	4805	3/10/17	3/18/17	Contig	SC	SAMEA2070417	GCA_900130295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/295/GCA_900130295.1_10625_5_61	-	146
Burkholderia gladioli NBRC 13700	1218079	PRJDB252	172075	Proteobacteria	Betaproteobacteria	8.76261	67.7	-	BBJG01	185	7618	7267	7/25/14	4/2/17	Contig	National Institute of Technology and Evaluation	SAMD00017341	GCA_000739755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/755/GCA_000739755.1_ASM73975v1	-	NBRC 13700
Aeromonas veronii Hm21	1347420	PRJNA205862	205862	Proteobacteria	Gammaproteobacteria	4.68496	58.7	-	ATFB01	50	4318	4157	9/4/13	4/2/17	Contig	University of Connecticut	SAMN02471703	GCA_000464515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/515/GCA_000464515.1_Hm21	24092791	Hm21
Chlamydia pecorum VR629	1427371	PRJNA229200	229200	PVC group	Chlamydiae	1.10564	41.1	chromosome:NZ_CM002311.1/CM002311.1	AZBD01	1	1992	1889	12/12/13	4/2/17	Chromosome	Queensland University of Technology	SAMN02470822	GCA_000508065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/065/GCA_000508065.1_CpecVR6291.0	25106440	VR629
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.25729	45.3	chromosome 1:NZ_CP022473.1/CP022473.1; chromosome 2:NZ_CP022472.1/CP022472.1	-	2	5115	4841	7/19/17	8/1/17	Complete Genome	University of New Hampshire	SAMN05579852	GCA_002209725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/725/GCA_002209725.2_ASM220972v2	28687650	MAVP-Q
Xanthomonas gardneri	90270	PRJNA276581	276581	Proteobacteria	Gammaproteobacteria	5.39417	63.5	-	JZJR01	251	4708	4401	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03378823	GCA_001009525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/525/GCA_001009525.1_ASM100952v1	26089818	SM194-10
Staphylococcus pseudintermedius	283734	PRJNA345069	345069	Terrabacteria group	Firmicutes	2.52311	37.6	-	MLGE01	50	2387	2240	10/20/16	4/5/17	Contig	University of Tennessee	SAMN05856671	GCA_001792775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/775/GCA_001792775.1_ASM179277v1	-	LMG 22219
Leuconostoc pseudomesenteroides	33968	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.98975	39	-	MPHQ01	132	2072	1869	3/27/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981486	GCA_002072585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/585/GCA_002072585.1_ASM207258v1	28217118	LMGH97
Klebsiella aerogenes UCI 48	1400145	PRJNA219300	219300	Proteobacteria	Gammaproteobacteria	5.2676	55	-	JCKM01	5	5152	4898	2/3/14	4/6/17	Scaffold	Broad Institute	SAMN02356628	GCA_000534075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/075/GCA_000534075.1_Ente_aero_UCI_48_V1	-	UCI 48
Streptobacillus moniliformis	34105	PRJNA319313	319313	Fusobacteria	Fusobacteriia	1.65766	26.4	-	LWQV01	212	1526	1416	6/3/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04884746	GCA_001655835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/835/GCA_001655835.1_ASM165583v1	-	CIP 55-48
Aeromonas caviae	648	PRJEB7046	267817	Proteobacteria	Gammaproteobacteria	4.5792	61.1	-	CDBS01	332	4352	3959	11/24/14	4/3/17	Scaffold	UCONNMISEQ	SAMEA2752402	GCA_000820265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/265/GCA_000820265.2_PRJEB7046	-	CECT 4221
Xanthomonas perforans	442694	PRJNA276615	276615	Proteobacteria	Gammaproteobacteria	5.30808	64.6	-	JZVG01	63	4827	4507	5/18/15	4/3/17	Contig	Universidade de Sao Paulo	SAMN03378980	GCA_001009465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/465/GCA_001009465.1_v1	26089818	Xp15-11
Weissella cibaria	137591	PRJNA316750	316750	Terrabacteria group	Firmicutes	2.31935	44.9	-	LVYB01	39	2216	2025	4/8/16	4/5/17	Contig	Kyunghee University	SAMN04589928	GCA_001614295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/295/GCA_001614295.1_ASM161429v1	-	FBL5
Candidatus Tremblaya princeps	189385	PRJEB13573	329215	Proteobacteria	Betaproteobacteria	0.137475	58.3	-	FLRF01	4	167	121	7/16/16	7/16/16	Contig	Division of Microbial Ecology Department of Microbiology and Ecosystem Science University of Vienna	SAMEA3935975	GCA_900080145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/145/GCA_900080145.1_TREMTM	-	-
Streptococcus cristatus	45634	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.07971	42.4	-	JVSO01	69	2093	2003	7/10/15	4/3/17	Contig	University of Washington	SAMN03197332	GCA_001069775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/775/GCA_001069775.1_ASM106977v1	26230489	142_SOLI
Streptococcus pseudopneumoniae	257758	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.02425	40	-	JVYO01	205	2051	1875	7/10/15	4/3/17	Contig	University of Washington	SAMN03197176	GCA_001068835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/835/GCA_001068835.1_ASM106883v1	26230489	1213_SPSE
Kingella kingae AA105	1305787	PRJEB1639	194491	Proteobacteria	Betaproteobacteria	1.99301	46.7	-	CBQW01	1	1938	1671	8/14/13	4/2/17	Scaffold	URMITE	SAMEA2271943	GCA_000469865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/865/GCA_000469865.1_AA105	-	AA105
Streptococcus parauberis	1348	PRJNA273857	273857	Terrabacteria group	Firmicutes	2.02048	35.5	-	LHAD01	12	2069	1958	3/29/16	4/5/17	Contig	Norfolk State University	SAMN03856836	GCA_001601895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/895/GCA_001601895.1_Spar_PL23_V2S2	-	PL23
Sphingobium yanoikuyae	13690	PRJNA311771	311771	Proteobacteria	Alphaproteobacteria	5.50384	64.2	-	LSTR01	111	5260	5065	5/13/16	4/5/17	Scaffold	Institute of Microbial Technology	SAMN04489739	GCA_001643135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/135/GCA_001643135.1_ASM164313v1	-	CD09_2
Myroides odoratimimus	76832	PRJNA270007	270007	FCB group	Bacteroidetes/Chlorobi group	4.15622	33.6	-	JWJO01	168	3768	3599	12/31/14	4/2/17	Contig	University of Malaya	SAMN03262493	GCA_000812825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/825/GCA_000812825.1_ASM81282v1	-	L41
Mycoplasma hominis	2098	PRJNA277319	277319	Terrabacteria group	Tenericutes	0.767767	27.2	-	JRXA01	16	688	606	3/2/15	4/3/17	Contig	Vaginal Microbiome Consortium	SAMN03083654	GCA_000935865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/865/GCA_000935865.1_ASM93586v1	-	PL5
Sinorhizobium fredii CCBAU 45436	1128331	PRJNA77219	77219	Proteobacteria	Alphaproteobacteria	6.81546	62.2	-	AJQO01	327	6785	6164	5/3/12	5/19/17	Contig	China Agricultural University	SAMN02469479	GCA_000261885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/885/GCA_000261885.1_45436	22586130	CCBAU 45436
Bartonella apis	1686310	PRJNA312663	312663	Proteobacteria	Alphaproteobacteria	2.60117	45.3	chromosome:NZ_CP015820.1/CP015820.1	-	1	2331	2201	2/28/17	3/2/17	Complete Genome	University of Lausanne	SAMN04505062	GCA_002007485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/485/GCA_002007485.1_ASM200748v1	-	BBC0178
Weissella cibaria	137591	PRJNA305557	305557	Terrabacteria group	Firmicutes	2.34291	45.3	chromosome:NZ_CP013726.1/CP013726.1	-	1	2188	2035	1/4/17	4/6/17	Complete Genome	Oradentics	SAMN04328345	GCA_001932695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/695/GCA_001932695.1_ASM193269v1	16946611	CMS2
Actinomyces oris	544580	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.24326	68	-	MSKN01	90	2729	2520	1/5/17	4/10/17	Scaffold	King's College London	SAMN05898727	GCA_001937415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/415/GCA_001937415.1_ASM193741v1	-	M48-1B-1
Streptococcus infantis SK1302	871237	PRJNA50779	50779	Terrabacteria group	Firmicutes	1.79225	39.2	-	AEDY01	148	2111	2102	10/4/10	12/5/13	Contig	University of Maryland	SAMN02435821	GCA_000148975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/975/GCA_000148975.2_ASM14897v1	-	SK1302
Haemophilus parainfluenzae	729	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	2.18427	39.3	-	JVRH01	105	2117	2014	7/10/15	4/3/17	Contig	University of Washington	SAMN03197365	GCA_001055595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/595/GCA_001055595.1_ASM105559v1	26230489	174_HPAR
Agrobacterium sp. 224MFTsu3.1	1167635	PRJNA187937	187937	Proteobacteria	Alphaproteobacteria	4.79938	59.7	-	ARQL01	21	4573	4432	4/26/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02440504	GCA_000384555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/555/GCA_000384555.1_ASM38455v1	-	224MFTsu3.1
Streptococcus parasanguinis	1318	PRJNA274768	274768	Terrabacteria group	Firmicutes	2.09846	42	-	JYOW01	2	2041	1916	3/25/15	4/3/17	Contig	University at Buffalo	SAMN03334906	GCA_000963275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/275/GCA_000963275.1_ASM96327v1	25999552	MGH413
Fusobacterium necrophorum DAB	1441735	PRJNA232680	232680	Fusobacteria	Fusobacteriia	2.52004	34	-	JAAF01	254	2306	2115	5/15/14	4/2/17	Contig	"Newport Laboratories, A Sanofi Company"	SAMN02781283	GCA_000691705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/705/GCA_000691705.1_FnecDABv1.0	-	DAB
[Clostridium] clostridioforme 90A3	999404	PRJNA64859	64859	Terrabacteria group	Firmicutes	5.54989	49.1	-	AGYQ01	11	5389	5052	4/19/13	5/19/17	Scaffold	Broad Institute	SAMN02596767	GCA_000371585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/585/GCA_000371585.1_Clos_clos_90A3_V1	-	90A3
Vibrio parahaemolyticus	670	PRJNA286197	286197	Proteobacteria	Gammaproteobacteria	5.25729	45.3	chromosome 1:NZ_CP011884.1/CP011884.1; chromosome 2:NZ_CP011885.1/CP011885.1	-	2	5122	4840	7/8/16	4/17/17	Complete Genome	University of New Hampshire	SAMN03766034	GCA_001682175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/175/GCA_001682175.1_ASM168217v1	-	-
Leptospira santarosai str. CBC523	1049979	PRJNA74147	74147	Spirochaetes	Spirochaetia	4.03766	41.9	-	AHOF02	37	4085	3798	1/24/12	4/1/17	Contig	J. Craig Venter Institute	SAMN02436504	GCA_000244575.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/575/GCA_000244575.3_gls454165v2.0	-	CBC523
Prevotella bryantii	77095	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.92277	38.1	-	DGWU01	36	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451179	GCA_002395335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/335/GCA_002395335.1_ASM239533v1	28894102	-
Taylorella equigenitalis 14/56	1091497	PRJNA73731	73731	Proteobacteria	Betaproteobacteria	1.65288	37.5	-	-	1	1562	1461	-	-	Scaffold	University of Bristol	SAMEA4532337	GCA_000367245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/245/GCA_000367245.1_ASM36724v1	-	14/56
Mycoplasma ovipneumoniae	29562	PRJNA253506	253506	Terrabacteria group	Tenericutes	1.01406	29.2	-	JOTI01	83	766	663	8/26/16	4/5/17	Scaffold	Southwest University for Nationalities	SAMN02870875	GCA_001715115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/115/GCA_001715115.1_ASM171511v1	-	TC5
Streptococcus gallolyticus	315405	PRJNA304333	304333	Terrabacteria group	Firmicutes	2.548	38.2	-	LQXV01	190	2455	2012	3/2/16	4/5/17	Scaffold	University of Kaiserslautern	SAMN04324322	GCA_001579135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/135/GCA_001579135.1_ASM157913v1	27303717	DD03
Lysinibacillus fusiformis	28031	PRJNA348753	348753	Terrabacteria group	Firmicutes	4.40285	37.5	-	DCDM01	21	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06450979	GCA_002316405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/405/GCA_002316405.1_ASM231640v1	28894102	-
Pantoea vagans	470934	PRJEB8255	278831	Proteobacteria	Gammaproteobacteria	4.85077	55.1	-	CEFP01	84	4558	4380	3/20/15	4/12/17	Scaffold	FONDAZIONE EDMUND MACH	SAMEA3213013	GCA_900068865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/068/865/GCA_900068865.1_PaVv1.FASTA	-	PaVv11
Helicobacter suis HS1	710393	PRJEB15619	356151	Proteobacteria	delta/epsilon subdivisions	1.6324	40	-	FMSR01	77	1677	1532	12/4/16	4/6/17	Scaffold	GHENT UNIVERSITY	SAMEA4476654	GCA_900099105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/105/GCA_900099105.1_HS1_output_strain4	-	-
Acinetobacter haemolyticus MTCC 9819	1331660	PRJNA201356	201356	Proteobacteria	Gammaproteobacteria	3.38423	39.7	-	ASYX01	182	3224	3065	7/16/13	4/1/17	Contig	Institute of Microbial Technology	SAMN02470000	GCA_000430205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/205/GCA_000430205.1_Acinetobacter_haemolyticus	-	MTCC 9819
Moraxella bovoculi	386891	PRJNA282717	282717	Proteobacteria	Gammaproteobacteria	2.30754	45.3	chromosome:NZ_CP011379.1/CP011379.1	-	1	2259	2080	5/6/15	4/3/17	Complete Genome	USDA	SAMN03577771	GCA_000988705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/705/GCA_000988705.1_ASM98870v1	-	33362
Pantoea ananatis Sd-1	1440773	PRJNA232443	232443	Proteobacteria	Gammaproteobacteria	4.92674	53.3	-	AZTE01	75	4625	4362	2/26/14	4/2/17	Scaffold	Hunan University	SAMN02951867	GCA_000582575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/575/GCA_000582575.1_Pantoea_Sequence	26209031	Sd-1
Streptococcus anginosus SK52 = DSM 20563	1000570	PRJNA169750	169750	Terrabacteria group	Firmicutes	1.9382	38.6	-	AREF01	14	1895	1799	4/19/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441718	GCA_000373605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/605/GCA_000373605.1_ASM37360v1	-	DSM 20563
Streptococcus constellatus	76860	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.85307	38	-	JVLV01	48	1820	1687	7/10/15	4/3/17	Contig	University of Washington	SAMN03197507	GCA_001072275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/275/GCA_001072275.1_ASM107227v1	26230489	317_SINT
Staphylococcus lugdunensis	28035	PRJNA382327	382327	Terrabacteria group	Firmicutes	2.57952	33.7	chromosome:CP020761.1	-	1	2482	2391	4/18/17	5/1/17	Chromosome	EA7290	SAMN06703936	GCA_002096075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/075/GCA_002096075.1_ASM209607v1	-	VISLISI_37
Aminobacterium colombiense DSM 12261	572547	PRJNA32587	32587	Synergistetes	Synergistia	1.98059	45.3	chromosome:NC_014011.1/CP001997.1	-	1	1943	1870	4/5/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598488	GCA_000025885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/885/GCA_000025885.1_ASM2588v1	21304712	DSM 12261
Bacillus cytotoxicus	580165	PRJNA394959	394959	Terrabacteria group	Firmicutes	4.30355	35.9	-	NOKF01	2	4489	4024	8/14/17	8/16/17	Contig	University of Zurich	SAMN07367960	GCA_002251025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/025/GCA_002251025.1_ASM225102v1	-	CH_15
Veillonella parvula HSIVP1	1316254	PRJNA196131	196131	Terrabacteria group	Firmicutes	2.17799	38.6008	chromosome:CM002135.1	ASKE01	1	4028	4028	8/19/13	1/8/14	Chromosome	Top Institute Food and Nutrition (TIFN)	SAMN02471223	GCA_000448705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/705/GCA_000448705.1_HSIVP1_1.0	24309734	HSIVP1
Acinetobacter pittii ANC 4050	1217691	PRJNA183269	183269	Proteobacteria	Gammaproteobacteria	3.83683	38.8	-	APQM01	1	3678	3524	5/16/13	4/1/17	Scaffold	Broad Institute	SAMN01828157	GCA_000399685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/685/GCA_000399685.1_Acin_pitt_ANC_4050_V1	-	ANC 4050
Xanthomonas euvesicatoria	456327	PRJNA275506	275506	Proteobacteria	Gammaproteobacteria	5.35572	64.5	-	JZRU01	113	4852	4426	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03349343	GCA_001009165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/165/GCA_001009165.1_ASM100916v1	-	F4-2
Pseudomonas amygdali pv. aesculi str. 2250	666475	PRJNA39921	39921	Proteobacteria	Gammaproteobacteria	5.98503	58.2	-	ACXT01	364	5629	5038	8/21/09	5/19/17	Scaffold	The Sainsbury Laboratory	SAMN02471154	GCA_000163275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/275/GCA_000163275.1_ASM16327v1	20419105	2250
Brucella sp. 56/94	1169234	PRJNA173519	173519	Proteobacteria	Alphaproteobacteria	3.32483	57.2	-	AQKP01	4	3381	3154	4/16/13	4/8/17	Scaffold	Broad Institute	SAMN00839716	GCA_000370925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/925/GCA_000370925.1_Bruc_sp_56_94_V1	-	56/94
Enterobacter asburiae L1	1421338	PRJNA218844	218844	Proteobacteria	Gammaproteobacteria	4.49832	55.9	-	AWXI01	195	4430	4178	11/22/13	4/2/17	Contig	UNIVERSITY OF MALAYA	SAMN02471838	GCA_000498635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/635/GCA_000498635.1_L1	-	L1
Parageobacillus thermoglucosidans	1426	PRJNA320062	320062	Terrabacteria group	Firmicutes	3.89456	43.2	-	LXMA01	44	4029	3749	6/3/16	4/5/17	Contig	Nankai University	SAMN04915186	GCA_001655645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/645/GCA_001655645.1_ASM165564v1	-	W-2
Vibrio coralliilyticus OCN008	1384040	PRJNA214563	214563	Proteobacteria	Gammaproteobacteria	5.5349	45.7	-	AVOO01	210	5234	4404	8/29/13	4/21/17	Contig	University of Hawaii	SAMN02304133	GCA_000461895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/895/GCA_000461895.1_OCN008	24092784	OCN008
Vibrio mimicus CAIM 602	1259812	PRJNA179483	179483	Proteobacteria	Gammaproteobacteria	4.32029	46.3	-	AOMO01	120	4220	3727	2/8/13	5/19/17	Contig	"CIAD, A.C."	SAMN02469605	GCA_000338875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/338/875/GCA_000338875.1_CAIM_602T_1.0	23516211	CAIM 602
Desulfurococcus amylolyticus 1221n	490899	PRJNA28141	28141	TACK group	Crenarchaeota	1.36522	45.3	chromosome:NC_011766.1/CP001140.1	-	1	1460	1386	12/24/08	4/17/17	Complete Genome	Centre 'Bioengineering' RAS	SAMN02603098	GCA_000020905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/905/GCA_000020905.1_ASM2090v1	19114480	1221n
Pediococcus acidilactici D3	1306952	PRJNA193440	193440	Terrabacteria group	Firmicutes	1.96283	42.1	-	AQGT01	11	2032	1752	4/23/13	4/1/17	Scaffold	Texas A&M University	SAMN01991044	GCA_000380265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/265/GCA_000380265.1_PAD3_1.0	23788534	D3
Lactobacillus brevis	1580	PRJNA313253	313253	Terrabacteria group	Firmicutes	2.91798	45.2701	chromosome:NZ_CP019734.1/CP019734.1; plasmid pl12108-1:NZ_CP019735.1/CP019735.1; plasmid pl12108-2:NZ_CP019736.1/CP019736.1; plasmid pl12108-3:NZ_CP019737.1/CP019737.1; plasmid pl12108-4:NZ_CP019738.1/CP019738.1; plasmid pl12108-5:NZ_CP019739.1/CP019739.1; plasmid pl12108-6:NZ_CP019740.1/CP019740.1; plasmid pl12108-7:NZ_CP019741.1/CP019741.1; plasmid pl12108-8:NZ_CP019742.1/CP019742.1	-	9	2926	2738	5/2/17	5/6/17	Complete Genome	Technische Universitaet Muenchen	SAMN04517635	GCA_002117345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/345/GCA_002117345.1_ASM211734v1	-	TMW 1.2108
Cylindrospermopsis raciborskii CYLP	2021699	PRJNA395049	395049	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.97214	40	-	NPIK01	188	-	-	9/21/17	9/21/17	Scaffold	Universidade Federal do Rio de Janeiro	SAMN07370488	GCA_002321935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/935/GCA_002321935.1_ASM232193v1	-	CYLP
Pantoea stewartii	66269	PRJNA278247	278247	Proteobacteria	Gammaproteobacteria	4.693	53.8	-	LDSH01	51	4389	4218	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401412	GCA_001476355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/355/GCA_001476355.1_ASM147635v1	26793183	NS381
Vibrio fluvialis NBRC 103150	1219074	PRJDB353	172322	Proteobacteria	Gammaproteobacteria	4.75347	49.9	-	BCZR01	42	4440	4313	3/11/16	4/5/17	Contig	National Institute of Technology and Evaluation	SAMD00046905	GCA_001598835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/835/GCA_001598835.1_ASM159883v1	-	NBRC 103150
Acinetobacter lwoffii NCTC 5866 = CIP 64.10 = NIPH 512	981327	PRJNA219244	219244	Proteobacteria	Gammaproteobacteria	3.38462	43.1	-	AYHO01	12	3306	3092	10/29/13	4/10/17	Scaffold	Broad Institute	SAMN02356578	GCA_000487975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/975/GCA_000487975.1_Acin_lwof_CIP64_10_V2	-	NIPH 512
Pseudoalteromonas sp. P1-11	1715254	PRJNA294442	294442	Proteobacteria	Gammaproteobacteria	4.37775	41	-	LJSP01	31	3923	3812	10/20/15	8/28/17	Scaffold	Hans Knoell Institute	SAMN04026658	GCA_001399995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/995/GCA_001399995.1_ASM139999v1	26659670	P1-11
Acinetobacter junii	40215	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.59704	38.7	-	BBOS01	168	3495	3242	11/8/14	4/2/17	Contig	National Institute of Technology and Evaluation	SAMD00020341	GCA_000775815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/815/GCA_000775815.1_ASM77581v1	-	NBRC 110497
Acinetobacter johnsonii	40214	PRJNA282556	282556	Proteobacteria	Gammaproteobacteria	3.3576	41.4	-	LBMO01	75	3277	2975	12/29/15	4/5/17	Contig	Huazhong Agricultural University	SAMN03571285	GCA_001483265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/483/265/GCA_001483265.1_ASM148326v1	26893438	MB44
Acinetobacter calcoaceticus ANC 3811	1217690	PRJNA183273	183273	Proteobacteria	Gammaproteobacteria	3.82768	38.6	-	APQJ01	2	3696	3497	5/16/13	4/1/17	Scaffold	Broad Institute	SAMN01828158	GCA_000399665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/665/GCA_000399665.1_Acin_calc_ANC_3811_V1	-	ANC 3811
Pseudomonas coronafaciens pv. oryzae	235277	PRJNA287070	287070	Proteobacteria	Gammaproteobacteria	5.50232	57.9	-	LGKZ01	15	5077	4844	9/18/15	4/4/17	Scaffold	University of Toronto	SAMN03837770	GCA_001293935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/935/GCA_001293935.1_Por36_1	-	36_1
Pseudomonas savastanoi pv. savastanoi	360920	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	6.02334	58	-	LJRJ01	321	5773	5215	10/20/15	4/4/17	Scaffold	University of Toronto	SAMN03976268	GCA_001401285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/285/GCA_001401285.1_PsvICMP4352	-	ICMP4352
Pseudomonas syringae pv. maculicola	59511	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	6.06386	58.4	-	LJQR01	229	5651	5278	10/20/15	4/4/17	Scaffold	University of Toronto	SAMN03976294	GCA_001400855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/855/GCA_001400855.1_PmaICMP3935	-	ICMP3935
Xanthomonas fuscans subsp. fuscans	366649	PRJNA264810	264810	Proteobacteria	Gammaproteobacteria	5.34256	64.7	-	JSEW02	240	4929	4317	11/10/14	4/3/17	Contig	University of Exeter	SAMN03142810	GCA_000774025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/025/GCA_000774025.2_NCPPB1402v2	26500625	NCPPB 1402
Bacteroides xylanisolvens	371601	PRJEB16671	349893	FCB group	Bacteroidetes/Chlorobi group	6.13174	41.8	-	FNRP01	64	4886	4657	10/22/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487924	GCA_900107825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/825/GCA_900107825.1_IMG-taxon_2623620516_annotated_assembly	-	NLAE-zl-G339
Butyrivibrio fibrisolvens	831	PRJEB17021	351209	Terrabacteria group	Firmicutes	5.01502	39.9	-	FOGJ01	77	4238	4076	10/29/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487884	GCA_900111185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/185/GCA_900111185.1_IMG-taxon_2623620520_annotated_assembly	-	AR40
Achromobacter xylosoxidans X02736	1350469	PRJNA209574	209574	Proteobacteria	Betaproteobacteria	7.0487	67.2	-	AZHL01	116	6664	6337	1/8/14	4/2/17	Scaffold	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN02597371	GCA_000517225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/225/GCA_000517225.1_X02736v1	25487802	X02736
Streptococcus oralis	1303	PRJNA304333	304333	Terrabacteria group	Firmicutes	2.03103	41.2	-	LQRI01	55	2060	1756	3/2/16	4/5/17	Scaffold	University of Kaiserslautern	SAMN04325021	GCA_001578855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/855/GCA_001578855.1_ASM157885v1	27303717	DD14
Ochrobactrum intermedium 229E	1337887	PRJNA205336	205336	Proteobacteria	Alphaproteobacteria	4.80822	57.9	-	ASXJ01	378	4985	4249	9/30/13	11/4/14	Contig	National Centre for Cell Science	SAMN02470619	GCA_000472165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/165/GCA_000472165.1_229E	25312622	229E
Streptomyces griseus subsp. griseus	67263	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.84982	71.5	-	JOGA01	89	7062	6771	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645278	GCA_000719355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/355/GCA_000719355.1_ASM71935v1	-	NRRL F-5144
Acinetobacter nosocomialis M2	1343071	PRJNA206997	206997	Proteobacteria	Gammaproteobacteria	3.78241	38.7	-	AWOW01	11	3608	3466	9/27/13	4/2/17	Contig	The Research Institute at Nationwide Children's Hospital	SAMN02471153	GCA_000472005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/005/GCA_000472005.1_Acinetobacter_nosocomialis_strain_M2_genome_Version	24201195	M2
Ruminococcus flavefaciens AE3010	1384066	PRJNA214530	214530	Terrabacteria group	Firmicutes	3.70595	45.9	-	JAGT01	3	3213	3066	1/14/14	4/3/17	Contig	DOE Joint Genome Institute	SAMN02584993	GCA_000526795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/795/GCA_000526795.1_ASM52679v1	-	AE3010
Klebsiella variicola	244366	PRJNA201994	201994	Proteobacteria	Gammaproteobacteria	5.38027	57.6	-	AYIF01	1	5311	5055	10/30/13	7/24/17	Scaffold	Broad Institute	SAMN02138615	GCA_000492475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/475/GCA_000492475.1_Kleb_pneu_UCI_10_V1	-	UCICRE 10
Bacillus atrophaeus ATCC 9372-1	903520	PRJNA37683	37683	Terrabacteria group	Firmicutes	4.10632	43.1	-	AEFM01	28	4157	3958	4/19/11	4/10/17	Contig	Transformational Medical Technologies Program	SAMN01816423	GCA_000204705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/705/GCA_000204705.2_ASM20470v2	21464989	ATCC 9372-1
Lactobacillus iners AB-1	713605	PRJNA43549	43549	Terrabacteria group	Firmicutes	1.28746	32.7	-	ADHG01	7	1241	1156	2/2/10	3/30/17	Contig	University of Western Ontario	SAMN02470230	GCA_000177755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/755/GCA_000177755.1_ASM17775v1	21059957	AB-1
Helicobacter bilis	37372	PRJNA261711	261711	Proteobacteria	delta/epsilon subdivisions	2.48559	34.9	-	JRPG01	542	2408	2035	10/10/14	4/2/17	Contig	Massachusetts Institute of Technology	SAMN03075566	GCA_000765785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/785/GCA_000765785.1_ASM76578v1	-	ATCC 51630
Rhodococcus hoagii	43767	PRJNA306614	306614	Terrabacteria group	Actinobacteria	5.65176	68.5	-	LRRA01	61	5297	5099	5/18/16	6/6/17	Contig	Northumbria University	SAMN04357308	GCA_001646925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/646/925/GCA_001646925.1_re13	-	N1301
Corynebacterium striatum	43770	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.74326	59.4	-	JUSN01	114	2547	2376	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03198009	GCA_001058455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/455/GCA_001058455.1_ASM105845v1	26230489	797_CAUR
Eikenella corrodens	539	PRJNA310649	310649	Proteobacteria	Betaproteobacteria	2.18819	55.9	-	LXSI01	13	2193	2105	5/19/16	4/5/17	Contig	Public Health Agency of Canada	SAMN04931633	GCA_001648315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/315/GCA_001648315.1_ASM164831v1	-	NML130388
Staphylococcus warneri	1292	PRJNA275682	275682	Terrabacteria group	Firmicutes	2.58962	32.5	-	LAKH01	83	2543	2408	4/27/15	4/3/17	Contig	Institute of Microbial Technology	SAMN03352182	GCA_000981125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/125/GCA_000981125.1_ASM98112v1	-	1DB1
Acinetobacter radioresistens	40216	PRJNA313371	313371	Proteobacteria	Gammaproteobacteria	3.20281	41.5	-	LWGP01	37	3053	2921	12/23/16	4/6/17	Contig	King Abdullah University of Science and Technology (KAUST)	SAMN04520137	GCA_001917365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/365/GCA_001917365.1_ASM191736v1	-	SA188
Staphylococcus capitis	29388	PRJNA240935	240935	Terrabacteria group	Firmicutes	2.59586	32.7	-	JGYJ01	90	2487	2428	6/27/14	4/2/17	Contig	The Fourth Affiliated Hospital of Harbin Medical University	SAMN02680303	GCA_000712995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/995/GCA_000712995.1_StaCap1.0	-	LNZR-1
Enterobacter cancerogenus	69218	PRJNA362261	362261	Proteobacteria	Gammaproteobacteria	4.87199	55.4	-	MTKD01	25	4753	4561	3/23/17	3/25/17	Contig	Institute of Microbial Technology	SAMN06237083	GCA_002072125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/125/GCA_002072125.1_ASM207212v1	-	C9
Staphylococcus hominis	1290	PRJNA272632	272632	Terrabacteria group	Firmicutes	2.12401	31.4	-	LFKR01	16	2108	1972	7/10/15	4/3/17	Contig	The Pennsylvania State University	SAMN03659004	GCA_001051915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/915/GCA_001051915.1_ASM105191v1	26966197	As2
Vibrio parahaemolyticus	670	PRJNA301198	301198	Proteobacteria	Gammaproteobacteria	5.33969	45.2571	chromosome 1:NZ_CP013248.1/CP013248.1; chromosome 2:NZ_CP013249.1/CP013249.1; plasmid unnamed:NZ_CP013250.1/CP013250.1	-	3	5184	4844	11/16/16	3/20/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN04241617	GCA_001879585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/585/GCA_001879585.1_ASM187958v1	-	FORC_022
Bifidobacterium pseudocatenulatum	28026	PRJDB4597	325619	Terrabacteria group	Actinobacteria	2.22312	56.4	-	BCXY01	24	1844	1679	6/10/16	4/5/17	Contig	Yakult Central Institute	SAMD00047609	GCA_001685965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/965/GCA_001685965.1_ASM168596v1	27340092	CA-05
Providencia alcalifaciens RIMD 1656011	1256990	PRJNA181046	181046	Proteobacteria	Gammaproteobacteria	4.0442	41.7	-	JALB01	33	3761	3627	1/31/14	4/2/17	Contig	JCVI	SAMN02641581	GCA_000527295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/295/GCA_000527295.1_PalRIMD1656011v1.0	-	RIMD 1656011
Rothia dentocariosa	2047	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.49131	53.8	-	JVXR01	93	2150	2021	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197199	GCA_001061305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/305/GCA_001061305.1_ASM106130v1	26230489	1234_RDEN
Prevotella bivia	28125	PRJNA267549	267549	FCB group	Bacteroidetes/Chlorobi group	2.38676	39.5	-	JUWN01	354	2056	1917	7/10/15	4/3/17	Contig	University of Washington	SAMN03197905	GCA_001065995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/995/GCA_001065995.1_ASM106599v1	26230489	700_PDEN
Gardnerella vaginalis JCP8481B	1261070	PRJNA181325	181325	Terrabacteria group	Actinobacteria	1.57388	42.9	-	ATJF01	139	1315	1183	6/25/13	4/10/17	Scaffold	Washington University	SAMN02436829	GCA_000414445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/445/GCA_000414445.1_ASM41444v1	-	JCP8481B
Bacteroides dorei	357276	PRJNA377666	377666	FCB group	Bacteroidetes/Chlorobi group	5.4334	42	-	NFIK01	83	4580	4329	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473723	GCA_002161715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/715/GCA_002161715.1_ASM216171v1	-	An41
Lactobacillus ruminis	1623	PRJNA239217	239217	Terrabacteria group	Firmicutes	2.04418	43.3	-	JHAB01	89	2061	1841	5/18/15	4/3/17	Contig	Teagasc Food Research Centre	SAMN02650408	GCA_001008765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/765/GCA_001008765.1_ASM100876v1	25879663	DPC 6830
Lactobacillus jensenii IM18-1	1434653	PRJNA231005	231005	Terrabacteria group	Firmicutes	1.70563	34.4	-	AZNN01	107	1693	1592	5/22/15	4/3/17	Scaffold	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN02438379	GCA_001012665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/665/GCA_001012665.1_IM18-1v1	-	IM18-1
Aggregatibacter aphrophilus	732	PRJNA327277	327277	Proteobacteria	Gammaproteobacteria	2.36438	42.1	-	MAQE01	19	2204	2063	7/6/16	7/24/17	Scaffold	Menzies School of Health Research	SAMN05327896	GCA_001680805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/805/GCA_001680805.1_ASM168080v1	28604066	ATCC 7901
Streptococcus intermedius SK54	1095731	PRJNA75155	75155	Terrabacteria group	Firmicutes	1.91072	37.6	-	AJKN01	17	1864	1782	4/10/12	3/30/17	Contig	J. Craig Venter Institute	SAMN00761834	GCA_000258445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/445/GCA_000258445.1_SintermediusSK54v1.0	-	SK54
Streptomyces albus	1888	PRJDB3366	270043	Terrabacteria group	Actinobacteria	7.59451	72.7	-	BBQG01	95	6471	6116	12/13/14	3/11/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00023485	GCA_000813365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/365/GCA_000813365.1_ASM81336v1	25657283	NBRC 13014
Rothia mucilaginosa	43675	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.26435	59.6	-	JUOQ01	66	1778	1708	7/10/15	4/3/17	Contig	University of Washington	SAMN03198110	GCA_001067855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/855/GCA_001067855.1_ASM106785v1	26230489	902_RMUC
Aggregatibacter actinomycetemcomitans serotype e str. SC1083	907488	PRJNA53929	53929	Proteobacteria	Gammaproteobacteria	2.13743	44.6	-	AEJM01	54	2124	1917	9/29/11	3/30/17	Contig	University of Southern California School of Dentistry	SAMN02471943	GCA_000226755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/755/GCA_000226755.2_ASM22675v2	-	SC1083
Lactobacillus crispatus FB077-07	883092	PRJNA52105	52105	Terrabacteria group	Firmicutes	2.69938	37.5	-	AGZG01	10	2679	2420	9/18/12	3/30/17	Scaffold	Broad Institute	SAMN02463885	GCA_000301135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/135/GCA_000301135.1_Lact_cris_FB077-07_V1	-	FB077-07
Dickeya zeae ZJU1202	1175299	PRJNA159489	159489	Proteobacteria	Gammaproteobacteria	4.58711	53.3	-	AJVN01	188	4086	3899	5/23/12	5/18/17	Contig	Institute of Biotechnology	SAMN02472172	GCA_000264075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/075/GCA_000264075.1_ASM26407v1	22843587	ZJU1202
Brachyspira hyodysenteriae	159	PRJNA272555	272555	Spirochaetes	Spirochaetia	3.16704	27	-	JXNB01	111	2822	2692	5/26/15	4/3/17	Scaffold	Murdoch University	SAMN03283812	GCA_001012915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/915/GCA_001012915.1_ASM101291v1	26098837	FMV89.3323
Teredinibacter turnerae 1133Y.S.0a.04	1313298	PRJNA195714	195714	Proteobacteria	Gammaproteobacteria	5.13498	51.2	-	JIBG01	6	4190	4053	4/8/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02743947	GCA_000620425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/425/GCA_000620425.1_ASM62042v1	-	1133Y.S.0a.4
Mycobacterium kansasii	1768	PRJNA374853	374853	Terrabacteria group	Actinobacteria	6.46392	66	chromosome:NZ_CP019888.1/CP019888.1	-	1	5831	5419	4/11/17	4/13/17	Chromosome	University of Lodz	SAMN06339047	GCA_002085835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/835/GCA_002085835.1_ASM208583v1	-	9MK
Pectobacterium carotovorum subsp. brasiliense	180957	PRJNA269228	269228	Proteobacteria	Gammaproteobacteria	4.82601	52	-	JUJL01	14	4347	4159	12/29/14	4/3/17	Scaffold	Beijing Academy of Agriculture and Forestry Sciences	SAMN03252607	GCA_000808295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/295/GCA_000808295.1_ASM80829v1	-	YC T31
Variovorax paradoxus	34073	PRJNA294421	294421	Proteobacteria	Betaproteobacteria	9.488	69.2	-	LKTV01	335	8888	8504	10/19/15	4/11/17	Contig	US EPA	SAMN04146764	GCA_001399545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/545/GCA_001399545.1_ASM139954v1	-	H084
Streptococcus equinus JB1	1294274	PRJNA189512	189512	Terrabacteria group	Firmicutes	1.95422	37.6	-	AUZH01	45	1965	1790	9/2/14	4/2/17	Contig	Frederick National Laboratory for Cancer Research	SAMN01983952	GCA_000747205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/205/GCA_000747205.1_Streptococcus_bovis_JB1	25301652	JB1
Rhodococcus opacus	37919	PRJNA246296	246296	Terrabacteria group	Actinobacteria	10.1181	66.7977	chromosome:CP008947.1; plasmid pPDG1:CP008948.1; plasmid pPDG2:CP008949.1; plasmid pPDG3:CP008950.1; plasmid pPDG4:CP008951.1; plasmid pPDG5:CP008952.1	-	6	8621	8357	7/30/14	9/25/14	Chromosome	Consiglio Nazionale delle Ricerche	SAMN02769606	GCA_000736435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/435/GCA_000736435.1_ASM73643v1	-	R7
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.73509	47.6	-	MDZL01	85	3434	3270	11/17/16	4/5/17	Contig	The University of Queensland	SAMN04320387	GCA_001880355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/355/GCA_001880355.1_ASM188035v1	-	88/3873
Candidatus Liberibacter asiaticus	34021	PRJNA292590	292590	Proteobacteria	Alphaproteobacteria	1.23365	36.5	-	LIIM01	9	1125	1042	9/22/15	4/17/17	Contig	USDA-ARS	SAMN03983876	GCA_001296945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/945/GCA_001296945.1_ASM129694v1	26543132	YCPsy
Caldicellulosiruptor bescii	31899	PRJEB19583	376346	Terrabacteria group	Firmicutes	2.97316	35.2	-	FUZN01	2	2859	2635	3/9/17	3/18/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04515608	GCA_900166995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/995/GCA_900166995.1_IMG-taxon_2622736603_annotated_assembly	-	JWCB005
Escherichia albertii NBRC 107761	1115511	PRJDB13	77961	Proteobacteria	Gammaproteobacteria	4.42242	49.8	-	BBMY01	235	4574	4125	9/25/14	2/23/17	Contig	National Institute of Technology and Evaluation (NITE)	SAMD00019863	GCA_000759775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/775/GCA_000759775.1_ASM75977v1	-	NBRC 107761
Edwardsiella tarda ATCC 15947 = NBRC 105688	667121	PRJDB227	171895	Proteobacteria	Gammaproteobacteria	3.61038	57.3	-	BANW01	34	3355	3235	1/11/13	4/1/17	Contig	National Institute of Technology and Evaluation	SAMD00041800	GCA_000341505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/505/GCA_000341505.1_ASM34150v1	-	NBRC 105688
Anoxybacillus flavithermus	33934	PRJNA270597	270597	Terrabacteria group	Firmicutes	3.72035	43.8	-	LQYU01	44	3804	3547	3/11/16	4/5/17	Scaffold	University of Groningen	SAMN03267297	GCA_001587555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/555/GCA_001587555.1_B4168	27151781	B4168
Sorangium cellulosum	56	PRJNA237844	237844	Proteobacteria	delta/epsilon subdivisions	11.6363	70.8	-	JEMC01	4200	9182	7491	3/11/16	3/11/16	Scaffold	Shandong University	SAMN02639849	GCA_001589205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/589/205/GCA_001589205.1_sce149.1	-	So0149
Mycobacterium intracellulare MIN_061107_1834	1335422	PRJNA203579	203579	Terrabacteria group	Actinobacteria	5.72846	67.9	-	JAOM01	42	5411	5121	1/27/14	4/2/17	Contig	Institute for Genome Sciences	SAMN02641627	GCA_000523795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/795/GCA_000523795.1_ASM52379v1	-	MIN_061107_1834
Xanthomonas albilineans	29447	PRJNA270030	270030	Proteobacteria	Gammaproteobacteria	3.65265	62.9	-	JZID01	2	3123	2864	3/25/15	4/3/17	Contig	CIRAD	SAMN03262630	GCA_000963055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/055/GCA_000963055.1_Xal-HVO005-G1	-	HVO005
Arcobacter butzleri L349	1447257	PRJNA233527	233527	Proteobacteria	delta/epsilon subdivisions	2.27793	27	-	JAIR01	72	2282	2198	5/19/15	4/3/17	Scaffold	Agriculture and Agri-Foods Canada	SAMN02581417	GCA_001010605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/605/GCA_001010605.1_A.butzleri_L349_1.0	25947176	L349
Lactobacillus sakei subsp. sakei LS25	1285582	PRJNA186903	186903	Terrabacteria group	Firmicutes	2.03022	40.8667	plasmid pLS25-1:NZ_ASTI01000039.1/ASTI01000039.1	ASTI01	38	1988	1917	5/29/13	4/10/17	Contig	Nofima	SAMN02178497	GCA_000478625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/625/GCA_000478625.2_ASM47862v2	23846274	LS25
Paenibacillus larvae subsp. larvae DSM 25719	697286	PRJNA42203	42203	Terrabacteria group	Firmicutes	4.57959	44.0849	plasmid pPLA1_10:NZ_ADFW01000008.1/ADFW01000008.1	ADFW01	8	4876	4392	12/19/13	4/2/17	Contig	Georg-August-University Goettingen	SAMN02597370	GCA_000511115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/115/GCA_000511115.1_ASM51111v1	24599066	DSM 25719
Lactobacillus johnsonii ATCC 33200	525330	PRJNA31495	31495	Terrabacteria group	Firmicutes	1.7805	34.5	-	ACGR01	32	1751	1586	2/19/09	3/30/17	Scaffold	BCM	SAMN00001472	GCA_000159355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/355/GCA_000159355.1_ASM15935v1	-	ATCC 33200
Bdellovibrio bacteriovorus	959	PRJNA313393	313393	Proteobacteria	Oligoflexia	3.65693	45.5	-	LUKF01	20	3501	3426	3/15/16	4/5/17	Scaffold	Hebrew University of Jerusalem	SAMN04521034	GCA_001592755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/755/GCA_001592755.1_ASM159275v1	-	BER2
Rhodococcus erythropolis DN1	1381122	PRJNA214035	214035	Terrabacteria group	Actinobacteria	6.5484	62.4	-	AUZK01	78	6163	5630	8/23/13	4/1/17	Contig	National Center for Biotechnology RSE	SAMN02470607	GCA_000454425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/425/GCA_000454425.1_RodocDN1	24136850	DN1
Akkermansia muciniphila	239935	PRJEB21068	396410	PVC group	Verrucomicrobia	2.71556	55.6	-	FXYC01	130	2394	2294	7/29/17	8/7/17	Contig	"WAGENINGEN UNIVERSITY, LABORATORY OF SYSTEMS AND SYNTHETIC BIOLOGY."	SAMEA104102607	GCA_900184985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/184/985/GCA_900184985.1_Mouse_1_89.fasta	-	-
Clostridium butyricum AGR2140	1280693	PRJNA185700	185700	Terrabacteria group	Firmicutes	4.55082	28.5	-	AUJN01	39	4099	3945	7/10/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441161	GCA_000424245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/245/GCA_000424245.1_ASM42424v1	-	AGR2140
Weissella cibaria	137591	PRJNA305559	305559	Terrabacteria group	Firmicutes	2.38494	45.2533	chromosome:NZ_CP013936.1/CP013936.1; plasmid unnamed1:NZ_CP013937.1/CP013937.1; plasmid unnamed2:NZ_CP013938.1/CP013938.1	-	3	2228	2061	1/13/17	4/6/17	Complete Genome	Oradentics	SAMN04328351	GCA_001951075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/075/GCA_001951075.1_ASM195107v1	23323221	CMU
Lysinibacillus sphaericus	1421	PRJNA246146	246146	Terrabacteria group	Firmicutes	4.90663	37.2	-	JMMU01	70	4783	4635	6/26/14	4/2/17	Contig	Army Medical and Veterinary Research Center	SAMN02743638	GCA_000712415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/415/GCA_000712415.1_ASM71241v1	-	1987
Acholeplasma laidlawii	2148	PRJNA383991	383991	Terrabacteria group	Tenericutes	1.44345	32	-	NELO01	101	1475	1329	8/15/17	8/17/17	Scaffold	Kazan Institute of Biochemistry and Biophysics KazSC RAS	SAMN06821057	GCA_002252185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/185/GCA_002252185.1_ASM225218v1	-	PG8RTet
Finegoldia magna	1260	PRJNA383659	383659	Terrabacteria group	Firmicutes	1.76162	32.1	-	NDYA01	35	1717	1610	8/7/17	8/9/17	Contig	Aarhus University	SAMN06769910	GCA_002243035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/035/GCA_002243035.1_ASM224303v1	-	T160124
Weissella cibaria	137591	PRJNA305558	305558	Terrabacteria group	Firmicutes	2.36349	45.239	chromosome:NZ_CP013934.1/CP013934.1; plasmid unnamed:NZ_CP013935.1/CP013935.1	-	2	2212	2058	1/13/17	4/6/17	Complete Genome	Oradentics	SAMN04328350	GCA_001951095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/095/GCA_001951095.1_ASM195109v1	16288835	CMS3
Pseudomonas mendocina NBRC 14162	1215108	PRJDB216	171635	Proteobacteria	Gammaproteobacteria	5.12469	62.8	-	BBQC01	22	4759	4654	12/13/14	4/2/17	Contig	National Institute of Technology and Evaluation	SAMD00023447	GCA_000813265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/265/GCA_000813265.1_ASM81326v1	-	NBRC 14162
Campylobacter concisus UNSW2	1242965	PRJNA177552	177552	Proteobacteria	delta/epsilon subdivisions	2.01366	39.2	-	ANNJ01	98	2068	1959	9/13/13	4/1/17	Contig	The University of New South Wales	SAMN02471192	GCA_000466725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/725/GCA_000466725.1_UNSW2	23984967	UNSW2
Vibrio campbellii	680	PRJNA371682	371682	Proteobacteria	Gammaproteobacteria	6.37132	45.2075	chromosome I:NZ_CP020076.1/CP020076.1; chromosome II:NZ_CP020077.1/CP020077.1; plasmid pVCGX1:NZ_CP020078.1/CP020078.1; plasmid pVCGX2:NZ_CP020079.1/CP020079.1; plasmid pVCGX3:NZ_CP020080.1/CP020080.1; plasmid pVCGX4:NZ_CP020081.1/CP020081.1	-	6	6073	5741	5/15/17	5/24/17	Complete Genome	Yellow Sea Fisheries Research Institute	SAMN06310879	GCA_002140055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/055/GCA_002140055.1_ASM214005v1	-	20130629003S01
Streptococcus iniae	1346	PRJNA349170	349170	Terrabacteria group	Firmicutes	2.39519	36.4	-	MNAC01	60	2474	2309	10/28/16	4/5/17	Contig	State University of Londrina	SAMN05924790	GCA_001855735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/735/GCA_001855735.1_ASM185573v1	-	UEL-Si1
Burkholderia ubonensis Bu	441166	PRJNA19539	19539	Proteobacteria	Betaproteobacteria	6.93253	67.3	-	ABBE01	1143	6690	5664	6/6/07	6/26/17	Contig	NMRC	SAMN02470672	GCA_000170335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/335/GCA_000170335.1_ASM17033v1	-	Bu
Clostridium novyi A str. 4570	1444290	PRJNA233478	233478	Terrabacteria group	Firmicutes	2.32409	28.8	-	JDRX01	69	2201	2043	10/24/14	4/2/17	Contig	National Veterinary Institute (SVA)	SAMN02593764	GCA_000768585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/585/GCA_000768585.1_4570_1.0	-	4570
Propionibacterium freudenreichii	1744	PRJEB6434	270198	Terrabacteria group	Actinobacteria	2.51145	67.3	-	CCYW01	43	2220	2109	12/11/14	4/3/17	Scaffold	INRA STLO	SAMEA2822494	GCA_001050975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/975/GCA_001050975.1_ASM105097v1	-	ITG P14
Parabacteroides sp. CT06	2025876	PRJNA397724	397724	FCB group	Bacteroidetes/Chlorobi group	5.37267	45.2	chromosome:NZ_CP022754.1/CP022754.1	-	1	4617	4386	8/16/17	8/17/17	Complete Genome	Kyung Hee University 	SAMN07485767	GCA_002257605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/605/GCA_002257605.1_ASM225760v1	-	CT06
Bacillus sonorensis	119858	PRJNA389958	389958	Terrabacteria group	Firmicutes	4.83229	45.2	chromosome:NZ_CP021920.1/CP021920.1	-	1	5024	4607	6/20/17	6/22/17	Complete Genome	Microbial Institute for Fermentation Industry	SAMN07211384	GCA_002202015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/015/GCA_002202015.1_ASM220201v1	-	SRCM101395
Yersinia intermedia	631	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.92693	47.5	-	CQBP01	46	4593	4368	3/23/15	4/3/17	Scaffold	SC	SAMEA859946	GCA_001153385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/385/GCA_001153385.1_4821_5_2	-	FCF202
Yersinia mollaretii	33060	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.53651	49.1	-	CTEP01	89	4118	3936	3/26/15	4/3/17	Scaffold	SC	SAMEA859849	GCA_001222925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/925/GCA_001222925.1_4821_7_3	-	58/02
Leuconostoc citreum	33964	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.80711	43.1	-	JVUV01	58	1826	1677	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197273	GCA_001062635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/635/GCA_001062635.1_ASM106263v1	26230489	1300_LCIT
Bartonella apis	1686310	PRJNA312664	312664	Proteobacteria	Alphaproteobacteria	2.64326	45.2	chromosome:NZ_CP015821.1/CP015821.1	-	1	2358	2238	2/28/17	3/2/17	Complete Genome	University of Lausanne	SAMN04505063	GCA_002007505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/505/GCA_002007505.1_ASM200750v1	-	BBC0244
Bacillus coagulans CSIL1	1298921	PRJNA190861	190861	Terrabacteria group	Firmicutes	3.46623	46.3	-	AXVW01	116	3516	3227	10/25/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02441436	GCA_000482605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/605/GCA_000482605.1_ASM48260v1	-	CSIL1
Vibrio sp. ER1A	1517681	PRJNA253939	253939	Proteobacteria	Gammaproteobacteria	6.5863	44.4	-	JPJA01	108	5688	5435	7/25/14	4/9/17	Scaffold	Institute of Marine and Environmental Technology	SAMN02898119	GCA_000733315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/315/GCA_000733315.1_ASM73331v1	25146136	ER1A
Staphylococcus saprophyticus	29385	PRJNA311173	311173	Terrabacteria group	Firmicutes	2.57949	33	-	LSLB01	38	2537	2368	5/25/16	4/5/17	Contig	Nofima	SAMN04479467	GCA_001651355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/355/GCA_001651355.1_ASM165135v1	27375578	MF4371
Streptococcus sanguinis SK150	888811	PRJNA53163	53163	Terrabacteria group	Firmicutes	2.32433	43.2	-	AEXY01	5	2300	2207	3/10/11	3/30/17	Scaffold	Baylor College of Medicine	SAMN02415615	GCA_000192245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/245/GCA_000192245.1_ASM19224v1	-	SK150
Moraxella bovoculi	386891	PRJNA282717	282717	Proteobacteria	Gammaproteobacteria	2.36317	45.2	chromosome:NZ_CP011376.1/CP011376.1	-	1	2316	2127	5/6/15	4/3/17	Complete Genome	USDA	SAMN03577766	GCA_000988615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/615/GCA_000988615.1_ASM98861v1	-	22581
Bacillus weihenstephanensis	86662	PRJNA318340	318340	Terrabacteria group	Firmicutes	5.85173	35.2	-	LXLT01	156	6134	5597	10/12/16	4/5/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04819585	GCA_001757835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/835/GCA_001757835.1_ASM175783v1	-	GOE8
Photobacterium angustum	661	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.80274	39.6	-	JZSV01	63	4320	4069	3/10/15	4/3/17	Contig	FDA/CFSAN	SAMN03295474	GCA_000950215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/215/GCA_000950215.1_CFSAN029426_01.0	25931609	GCSL-A9
Parabacteroides distasonis str. 3999B T(B) 4	1339344	PRJNA206130	206130	FCB group	Bacteroidetes/Chlorobi group	5.31568	44.9	-	JNHP01	180	4708	4300	6/9/14	6/12/17	Contig	IGS	SAMN02370944	GCA_000699905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/905/GCA_000699905.1_ASM69990v1	-	3999B T(B) 4
Moraxella bovoculi	386891	PRJNA282717	282717	Proteobacteria	Gammaproteobacteria	2.40095	45.2	chromosome:NZ_CP011378.1/CP011378.1	-	1	2371	2188	5/6/15	4/3/17	Complete Genome	USDA	SAMN03577767	GCA_000988685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/685/GCA_000988685.1_ASM98868v1	-	28389
Polynucleobacter duraquae	1835254	PRJNA240713	240713	Proteobacteria	Betaproteobacteria	2.02629	45.2	chromosome:NZ_CP007501.1/CP007501.1	-	1	2087	2023	4/20/15	4/10/17	Complete Genome	FREDI	SAMN02708862	GCA_000973625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/625/GCA_000973625.1_ASM97362v1	-	MWH-MoK4
Neisseria lactamica	486	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	2.33149	49.4	-	JVAU01	130	2325	2167	7/10/15	4/3/17	Contig	University of Washington	SAMN03197794	GCA_001065605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/605/GCA_001065605.1_ASM106560v1	26230489	595_NLAC
Listeria ivanovii subsp. ivanovii PAM 55	881621	PRJEB9346	283601	Terrabacteria group	Firmicutes	2.96554	37.1	-	CVPH01	17	2928	2740	5/13/15	2/27/17	Scaffold	URMITE	SAMEA3381228	GCA_001049935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/935/GCA_001049935.1_Listeria_ivanovii	-	G_770
Moraxella catarrhalis 46P47B1	857578	PRJNA49913	49913	Proteobacteria	Gammaproteobacteria	1.85604	41.6	-	AERF01	69	1751	1623	3/22/11	3/30/17	Contig	Center for Genomic Sciences	SAMN02393787	GCA_000192945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/945/GCA_000192945.2_ASM19294v2	21269504	46P47B1
Xenorhabdus bovienii str. puntauvense	1398201	PRJEB4322	255480	Proteobacteria	Gammaproteobacteria	4.4516	44.3	-	CBSW01	261	4134	3804	7/17/14	4/2/17	Scaffold	UWM	SAMEA3139093	GCA_000736635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/635/GCA_000736635.1_XBP_3528_PRJEB4322	-	puntauvense
Agrobacterium vitis	373	PRJNA328317	328317	Proteobacteria	Alphaproteobacteria	6.25791	57.5	-	MBFC01	82	5782	5539	11/1/16	4/5/17	Contig	Monash University Malaysia	SAMN05369608	GCA_001860135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/135/GCA_001860135.1_ASM186013v1	-	SF93
Bacteroides vulgatus str. 3975 RP4	1339352	PRJNA206134	206134	FCB group	Bacteroidetes/Chlorobi group	4.9897	42.2	-	JNHM01	184	4363	3993	6/9/14	4/2/17	Contig	IGS	SAMN02370951	GCA_000699865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/865/GCA_000699865.1_ASM69986v1	-	3975 RP4
Gluconobacter oxydans	442	PRJNA288385	288385	Proteobacteria	Alphaproteobacteria	2.85789	61.1	-	LHZD01	22	2560	2479	3/7/16	4/5/17	Contig	Ghent University	SAMN03799274	GCA_001580625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/625/GCA_001580625.1_ASM158062v1	-	LMG 1386
Bacillus clausii	79880	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.36044	44.6	-	NPCE01	146	4334	4183	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372705	GCA_002271575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/575/GCA_002271575.1_assembly-7540-2_v1	-	7540-2
Citrobacter koseri	545	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.71645	53.7	-	JUYC01	493	4827	4291	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197864	GCA_001057775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/775/GCA_001057775.1_ASM105777v1	26230489	661_CKOS
Lactobacillus salivarius DSM 20555 = ATCC 11741	1423799	PRJNA31503	31503	Terrabacteria group	Firmicutes	2.01725	32.7	-	ACGT01	32	1983	1858	2/19/09	4/10/17	Scaffold	Baylor College of Medicine	SAMN00001483	GCA_000159395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/395/GCA_000159395.1_ASM15939v1	-	ATCC 11741
Streptomyces scabiei	1930	PRJNA309839	309839	Terrabacteria group	Actinobacteria	9.99237	71.2	-	LRTN01	1650	9380	7980	2/5/16	3/12/17	Contig	University of Florida	SAMN04440839	GCA_001550245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/550/245/GCA_001550245.1_ASM155024v1	-	84-34
Clostridium beijerinckii	1520	PRJNA322807	322807	Terrabacteria group	Firmicutes	5.95334	29.6	-	LZZF01	302	5247	5081	2/23/17	2/25/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05170528	GCA_002006125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/125/GCA_002006125.1_ASM200612v1	-	ATCC 39058
Erwinia amylovora Ea266	1255304	PRJEB600	196603	Proteobacteria	Gammaproteobacteria	3.78693	53.5746	plasmid pEA29:NC_020914.1/HF560644.1	CAOY01	39	3553	3347	4/8/13	4/1/17	Contig	CeBiTec	SAMEA2272186	GCA_000367565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/565/GCA_000367565.2_ASM36756v2	-	Ea266
Niabella soli DSM 19437	929713	PRJNA61269	61269	FCB group	Bacteroidetes/Chlorobi group	4.69734	45.2	chromosome:NZ_CP007035.1/CP007035.1	-	1	3912	3845	1/3/14	4/17/17	Complete Genome	JGI	SAMN02261390	GCA_000243115.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/115/GCA_000243115.3_ASM24311v3	-	JS13-8; DSM 19437
Cronobacter sakazakii	28141	PRJNA248104	248104	Proteobacteria	Gammaproteobacteria	4.51435	56.8	-	JNCX01	138	4384	3606	10/9/15	4/4/17	Scaffold	"Nottingham Trent University, UK"	SAMN02786796	GCA_001308955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/308/955/GCA_001308955.1_ASM130895v1	26438044	767
Thermocrinis ruber	75906	PRJNA75073	75073	Aquificae	Aquificae	1.52104	45.2	chromosome:NZ_CP007028.1/CP007028.1	-	1	1665	1594	1/3/14	4/17/17	Complete Genome	JGI	SAMN02769647	GCA_000512735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/735/GCA_000512735.1_ASM51273v1	-	DSM 23557
Pleurocapsa sp. PCC 7327	118163	PRJNA158829	158829	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.98682	45.2	chromosome:NC_019689.1/CP003590.1	-	1	4548	4271	12/5/12	4/17/17	Complete Genome	JGI	SAMN02261346	GCA_000317025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/025/GCA_000317025.1_ASM31702v1	-	PCC 7327
Chitinophaga pinensis DSM 2588	485918	PRJNA27951	27951	FCB group	Bacteroidetes/Chlorobi group	9.12735	45.2	chromosome:NC_013132.1/CP001699.1	-	1	7355	7096	8/19/09	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00001914	GCA_000024005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/005/GCA_000024005.1_ASM2400v1	21304681	DSM 2588
Campylobacter lari subsp. lari	650054	PRJEB17067	351141	Proteobacteria	delta/epsilon subdivisions	1.49127	29.7	-	FOHH01	31	1550	1486	10/29/16	4/5/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421673	GCA_900111465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/465/GCA_900111465.1_IMG-taxon_2675903699_annotated_assembly	-	ATCC 35221
Brucella ovis IntaBari-2001-319-5096	1293917	PRJNA189529	189529	Proteobacteria	Alphaproteobacteria	3.2768	57.2	-	AQIL01	36	3411	3002	4/16/13	4/1/17	Contig	Broad Institute	SAMN01921150	GCA_000365945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/945/GCA_000365945.1_Bruc_ovis_IntaBari-2001-319-5096_V1	-	IntaBari-2001-319-5096
Moorella thermoacetica	1525	PRJNA330919	330919	Terrabacteria group	Firmicutes	2.73129	55.6	-	MIIF01	59	2756	2595	11/9/16	4/5/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05430240	GCA_001874085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/085/GCA_001874085.1_ASM187408v1	-	DSM 12797
Photorhabdus luminescens subsp. laumondii	141679	PRJNA283548	283548	Proteobacteria	Gammaproteobacteria	5.26823	42.4	-	LJPB01	287	4729	4257	12/21/15	4/11/17	Contig	University of New Hampshire	SAMN03579669	GCA_001473245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/245/GCA_001473245.1_ASM147324v1	26988056	HP88
Staphylococcus haemolyticus	1283	PRJNA246625	246625	Terrabacteria group	Firmicutes	2.43031	32.6	-	JPRW01	87	2419	2287	10/6/14	3/24/17	Contig	Universiti of Malaya	SAMN02943872	GCA_000764065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/065/GCA_000764065.1_ASM76406v1	26157506	C10A
Vibrio breoganii	553239	PRJNA318805	318805	Proteobacteria	Gammaproteobacteria	4.49218	45.1995	chromosome 1:NZ_CP016177.1/CP016177.1; chromosome 2:NZ_CP016178.1/CP016178.1; plasmid unnamed1:NZ_CP016179.1/CP016179.1	-	3	4195	3958	6/28/16	4/13/17	Complete Genome	Massachusetts Institute of Technology	SAMN04867928	GCA_001677275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/275/GCA_001677275.1_ASM167727v1	-	FF50
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.05892	67	-	LOVY01	147	6504	6153	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449216	GCA_001523535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/535/GCA_001523535.1_ASM152353v1	-	LA-5-5-30-S1-D2
Brevibacterium linens	1703	PRJNA387187	387187	Terrabacteria group	Actinobacteria	4.12822	62.7	-	NRHA01	56	3770	3629	9/21/17	9/23/17	Scaffold	"Dutton Lab, UCSD"	SAMN07141150	GCA_002332365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/365/GCA_002332365.1_ASM233236v1	28644126	738_8
Chromobacterium violaceum	536	PRJNA369804	369804	Proteobacteria	Betaproteobacteria	4.76071	65	-	MUKQ01	51	4406	4247	4/6/17	4/8/17	Contig	Centers for Disease Control and Prevention	SAMN06294332	GCA_002081735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/735/GCA_002081735.1_ASM208173v1	-	16-419A
Vibrio parahaemolyticus	670	PRJNA274308	274308	Proteobacteria	Gammaproteobacteria	5.4434	45.1939	chromosome 1:NZ_CP010883.1/CP010883.1; chromosome 2:NZ_CP010884.1/CP010884.1; plasmid P1:NZ_CP010885.1/CP010885.1; plasmid P2:NZ_CP010886.1/CP010886.1; plasmid P3:NZ_CP010887.1/CP010887.1	-	5	5188	4942	8/9/16	3/21/17	Complete Genome	Shanghai Ocean University	SAMN03325855	GCA_001700835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/835/GCA_001700835.1_ASM170083v1	-	CHN25
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.37669	45.1836	chromosome 1:NZ_CP022552.1/CP022552.1; chromosome 2:NZ_CP022553.1/CP022553.1; plasmid p1:NZ_CP022554.1/CP022554.1; plasmid p2:NZ_CP022555.1/CP022555.1	-	4	5181	4882	7/25/17	9/18/17	Complete Genome	University of New Hampshire	SAMN06042545	GCA_002220985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/985/GCA_002220985.2_HGAP	28687650	MAVP-R
Hirschia baltica ATCC 49814	582402	PRJNA33191	33191	Proteobacteria	Alphaproteobacteria	3.54011	45.1594	chromosome:NC_012982.1/CP001678.1; plasmid pHbal01:NC_012983.1/CP001679.1	-	2	3255	3197	7/17/09	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598497	GCA_000023785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/785/GCA_000023785.1_ASM2378v1	22675580	ATCC 49814
Pediococcus pentosaceus CGMCC 7049	1460385	PRJNA237570	237570	Terrabacteria group	Firmicutes	1.75105	37.3	-	JDVW01	8	1765	1651	6/16/14	4/2/17	Contig	"State Key Laboratory for Diagnosis and Treatment of Infectious Disease, The First Affiliated Hospital, Zhejiang University"	SAMN02639794	GCA_000708635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/635/GCA_000708635.1_PenPed1.0	-	CGMCC 7049
Caldithrix abyssi DSM 13497	880073	PRJNA350778	350778	Calditrichaeota	Calditrichae	4.97854	45.1	chromosome:NZ_CP018099.1/CP018099.1	-	1	3916	3835	11/28/16	4/16/17	Complete Genome	Winogradsky INMI RAS	SAMN05946030	GCA_001886815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/815/GCA_001886815.1_ASM188681v1	-	LF13
Parabacteroides distasonis ATCC 8503	435591	PRJNA13485	13485	FCB group	Bacteroidetes/Chlorobi group	4.81138	45.1	chromosome:NC_009615.1/CP000140.1	-	1	4081	3880	6/27/07	5/19/17	Complete Genome	Washington University (WashU)	SAMN02604310	GCA_000012845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/845/GCA_000012845.1_ASM1284v1	17579514	ATCC 8503
Shewanella denitrificans OS217	318161	PRJNA13390	13390	Proteobacteria	Gammaproteobacteria	4.54591	45.1	chromosome:NC_007954.1/CP000302.1	-	1	3973	3775	4/10/06	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02598300	GCA_000013765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/765/GCA_000013765.1_ASM1376v1	-	OS217
Methanospirillum hungatei JF-1	323259	PRJNA13015	13015	Euryarchaeota	Methanomicrobia	3.54474	45.1	chromosome:NC_007796.1/CP000254.1	-	1	3428	3294	2/17/06	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02598287	GCA_000013445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/445/GCA_000013445.1_ASM1344v1	26744606	JF-1
Bartonella henselae JK 41	1402979	PRJNA221537	221537	Proteobacteria	Alphaproteobacteria	1.87576	38.1	-	AZZU01	9	1674	1466	1/8/14	4/10/17	Scaffold	Broad Institute	SAMN02364138	GCA_000516735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/735/GCA_000516735.1_Bart_hens_JK_41_V1	-	JK 41
Lactobacillus acidophilus DSM 9126	1226676	PRJEB1839	210833	Terrabacteria group	Firmicutes	1.99176	34.6	-	CBLS01	27	1972	1849	7/7/13	4/2/17	Scaffold	INRA STLO	SAMEA2272239	GCA_000469745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/745/GCA_000469745.1_LaDSM9126V1	-	DSM 9126
Clostridium tetani	1513	PRJNA265068	265068	Terrabacteria group	Firmicutes	2.91434	28.5	-	JSWD01	152	2873	2744	12/19/14	4/2/17	Contig	Aarhus University	SAMN03145366	GCA_000805775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/775/GCA_000805775.1_ASM80577v1	25638019	184.08
Rhodobacter capsulatus YW2	1415159	PRJNA225628	225628	Proteobacteria	Alphaproteobacteria	3.77145	66.4	-	AYPZ01	62	3560	3416	12/11/13	4/4/17	Scaffold	University of British Columbia	SAMN02471352	GCA_000506545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/545/GCA_000506545.2_denovokmer200	24526637	YW2
Bartonella quintana JK 31	1134506	PRJNA81685	81685	Proteobacteria	Alphaproteobacteria	1.58672	38.9	-	AHPG01	5	1393	1209	6/12/14	4/10/17	Scaffold	Broad Institute	SAMN00778965	GCA_000708815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/815/GCA_000708815.1_Bart_quin_JK_31_V1	-	JK 31
Streptococcus uberis B362	1450191	PRJNA234018	234018	Terrabacteria group	Firmicutes	1.91267	36.4	-	JATC01	31	1860	1802	4/22/15	4/3/17	Contig	University of Nottingham	SAMN02570399	GCA_000975415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/975/415/GCA_000975415.1_ASM97541v1	25898893	B362
Bacteroides thetaiotaomicron	818	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	6.2448	42.7	-	CYYB01	31	4881	4693	10/1/15	4/4/17	Contig	SC	SAMEA3545281	GCA_001405255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/255/GCA_001405255.1_13414_6_57	-	2789STDY5608873
Salmonella bongori serovar 40:z35:-	1173775	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.61902	51.8	-	MXOG01	68	4613	4302	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367599	GCA_002035305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/305/GCA_002035305.1_ASM203530v1	-	BCW_1553
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.15732	39.9	-	FQSY01	3	1057	960	5/10/17	5/24/17	Contig	WTSI	SAMEA1094351	GCA_900118505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/505/GCA_900118505.1_7067_6_67	-	10DC87
Anaplasma phagocytophilum str. CRT35	1392508	PRJNA217037	217037	Proteobacteria	Alphaproteobacteria	1.44702	41.6	-	JFBI01	25	1192	1035	5/12/14	4/2/17	Contig	University of Florida	SAMN02647129	GCA_000689615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/615/GCA_000689615.1_ApCRT35_1.0	"2,543,720,725,437,600"	CRT35
Vibrio campbellii CAIM 519 = NBRC 15631	1224742	PRJNA322669	322669	Proteobacteria	Gammaproteobacteria	5.1781	45.088	chromosome 1:NZ_CP015863.1/CP015863.1; chromosome 2:NZ_CP015864.1/CP015864.1; plasmid unnamed:NZ_CP015865.1/CP015865.1	-	3	5002	4630	6/2/17	6/5/17	Complete Genome	Naval Research Laboratory	SAMN05172285	GCA_002163755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/755/GCA_002163755.1_ASM216375v1	-	"ATCC 25920, CAIM 519T"
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.07397	41.6	-	JJPB01	147	3502	3294	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708944	GCA_000978945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/978/945/GCA_000978945.1_gtlEnvA5udCFS	25756680	3.F.A.1A.3
Chlamydia muridarum MopnTet14	658600	PRJNA39295	39295	PVC group	Chlamydiae	1.08874	40.6	chromosome:NZ_ACUJ01000001.3/ACUJ01000001.1	ACUJ01	1	971	918	1/26/10	3/30/17	Chromosome	Oregon State University	SAMN02470774	GCA_000175535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/535/GCA_000175535.1_ASM17553v1	-	MopnTet14
Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759	1219067	PRJNA267132	267132	Proteobacteria	Gammaproteobacteria	5.17515	45.0766	chromosome 1:NZ_CP009977.1/CP009977.1; chromosome 2:NZ_CP009978.1/CP009978.1	-	2	4745	4509	12/3/15	4/4/17	Complete Genome	Harvard Medical School	SAMN03178087	GCA_001456255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/255/GCA_001456255.1_ASM145625v1	-	ATCC 14048
Mycobacterium smegmatis MC2 51	1445611	PRJNA233977	233977	Terrabacteria group	Actinobacteria	6.82374	67.4	-	JAJD01	96	6696	6516	1/23/14	4/2/17	Scaffold	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN02951866	GCA_000521845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/845/GCA_000521845.1_MC2_51v1	24558240	MC2 51
Clostridium acetobutylicum	1488	PRJNA384327	384327	Terrabacteria group	Firmicutes	4.0772	30.7094	plasmid pSOL1:NZ_CM008108.1/CM008108.1	NERI01	34	3975	3862	7/10/17	7/19/17	Scaffold	The Ohio State University	SAMN06840644	GCA_002216305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/305/GCA_002216305.2_ASM221630v2	-	ATCC 55025
Lactobacillus gasseri	1596	PRJNA272102	272102	Terrabacteria group	Firmicutes	1.91445	34.9	-	LRQD01	64	1916	1769	2/2/16	4/4/17	Scaffold	The Genome Institute at Washington University	SAMN03854352	GCA_001546525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/525/GCA_001546525.1_ASM154652v1	-	PSS7772D
Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759	1219067	PRJNA327130	327130	Proteobacteria	Gammaproteobacteria	5.16869	45.0763	chromosome 1:NZ_CP016345.1/CP016345.1; chromosome 2:NZ_CP016346.1/CP016346.1	-	2	4741	4502	7/6/16	4/5/17	Complete Genome	"Synthetic Genomics, Inc."	SAMN05302747	GCA_001680025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/025/GCA_001680025.1_ASM168002v1	-	ATCC 14048
Vibrio harveyi	669	PRJNA340970	340970	Proteobacteria	Gammaproteobacteria	6.07085	45.0498	chromosome 1:NZ_CP018680.2/CP018680.2; chromosome 2:NZ_CP018681.2/CP018681.2; plasmid p1:NZ_CP018682.2/CP018682.2; plasmid p2:NZ_CP018683.2/CP018683.2; plasmid p3:NZ_CP018684.2/CP018684.2	-	5	5714	5415	12/19/16	4/6/17	Complete Genome	hainan academy of ocean and fisheries sciences	SAMN06041746	GCA_001908435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/435/GCA_001908435.2_ASM190843v2	-	-
Streptococcus gordonii	1302	PRJNA274768	274768	Terrabacteria group	Firmicutes	2.18832	40.6	-	JYGN01	7	2146	2015	3/23/15	4/3/17	Contig	University at Buffalo	SAMN03334897	GCA_000959965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/965/GCA_000959965.1_ASM95996v1	25999552	UB10712
Vibrio tubiashii ATCC 19109	1051646	PRJNA256164	256164	Proteobacteria	Gammaproteobacteria	5.54034	45.0269	chromosome 1:NZ_CP009354.1/CP009354.1; chromosome 2:NZ_CP009355.1/CP009355.1; plasmid p123:NZ_CP009357.1/CP009357.1; plasmid p251:NZ_CP009356.1/CP009356.1; plasmid p48:NZ_CP009359.1/CP009359.1; plasmid p57:NZ_CP009358.1/CP009358.1	-	6	5202	4967	11/5/14	4/10/17	Complete Genome	USDA-Agricultural Research Service-Eastern Regional Research Center	SAMN02940924	GCA_000772105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/105/GCA_000772105.1_ASM77210v1	25523763	ATCC 19109
Vibrio campbellii	680	PRJNA361283	361283	Proteobacteria	Gammaproteobacteria	6.19598	45.0222	chromosome 1:NZ_CP019293.1/CP019293.1; chromosome 2:NZ_CP019294.1/CP019294.1; plasmid pLMB143:NZ_CP019296.1/CP019296.1; plasmid pLMB157:NZ_CP019295.1/CP019295.1; plasmid pLMB96:NZ_CP019298.1/CP019298.1; plasmid pLMB99:NZ_CP019297.1/CP019297.1	-	6	5816	5524	1/23/17	4/10/17	Complete Genome	Hohai University	SAMN06229929	GCA_001969325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/325/GCA_001969325.1_ASM196932v1	-	LMB29
Mesorhizobium loti	381	PRJNA306524	306524	Proteobacteria	Alphaproteobacteria	7.46454	63	-	LPWA01	185	7221	5898	1/11/16	4/11/17	Contig	Federal University of Lavras	SAMN04351373	GCA_001510895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/895/GCA_001510895.1_ASM151089v1	26966214	UFLA 01-765
Candidatus Planktophila limnetica	573600	PRJNA327031	327031	Terrabacteria group	Actinobacteria	1.32879	45	chromosome:NZ_CP016782.1/CP016782.1	-	1	1386	1332	9/8/17	10/2/17	Complete Genome	University of Zurich	SAMN05296534	GCA_002288365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/365/GCA_002288365.1_ASM228836v1	-	-
Bordetella bronchiseptica Bbr77	1208659	PRJEB142	177233	Proteobacteria	Betaproteobacteria	5.11572	67.5	-	CAKU01	1	4868	4460	10/12/12	5/18/17	Scaffold	WTSI	SAMEA2272065	GCA_000313065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/065/GCA_000313065.1_ASM31306v1	-	Bbr77
Treponema denticola SP33	999437	PRJNA64925	64925	Spirochaetes	Spirochaetia	2.93349	37.9	-	AGDZ01	4	2824	2650	2/7/13	4/2/17	Scaffold	Broad Institute	SAMN02596725	GCA_000338475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/338/475/GCA_000338475.1_Trep_dent_SP33_V1	-	SP33
Bacteroides uniformis	820	PRJEB8300	276430	FCB group	Bacteroidetes/Chlorobi group	4.51501	47.1	-	CELS01	929	3760	3340	2/24/15	4/3/17	Contig	CGS-GL	SAMEA3217998	GCA_000939155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/155/GCA_000939155.1_2a7B_assembly3	-	2a7B
[Clostridium] bolteae WAL-14578	742732	PRJNA46383	46383	Terrabacteria group	Firmicutes	6.60488	49	-	ADLI01	30	6190	5907	7/16/15	4/3/17	Scaffold	Broad Institute	SAMN00103470	GCA_001078425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/425/GCA_001078425.1_Clos_bolt_WAL_14578_V1	-	WAL-14578
Bacteroides ovatus SD CMC 3f	702443	PRJNA42769	42769	FCB group	Bacteroidetes/Chlorobi group	6.77528	41.9	-	ADMO01	156	5565	5231	3/30/10	5/18/17	Contig	J. Craig Venter Institute	SAMN00008359	GCA_000178275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/275/GCA_000178275.1_ASM17827v1	-	SD CMC 3f
[Ruminococcus] torques	33039	PRJEB10915	297013	Terrabacteria group	Firmicutes	5.81403	41.2	-	CYYD01	111	5497	5400	10/1/15	5/19/16	Contig	SC	SAMEA3545428	GCA_001406495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/495/GCA_001406495.1_14207_7_88	-	2789STDY5834965
Providencia stuartii	588	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	4.49495	41.7	-	LNHS01	102	4272	4029	12/9/15	4/4/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158301	GCA_001463005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/005/GCA_001463005.1_ASM146300v1	-	50655837
Alteromonas mediterranea	314275	PRJNA352689	352689	Proteobacteria	Gammaproteobacteria	4.34444	45	chromosome:NZ_CP018026.1/CP018026.1	-	1	3746	3615	11/28/16	4/5/17	Complete Genome	University Miguel Hernandez	SAMN05991969	GCA_001886455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/455/GCA_001886455.1_ASM188645v1	-	AR43
Clostridium sporogenes	1509	PRJNA266242	266242	Terrabacteria group	Firmicutes	4.02106	27.8	-	JZJP01	202	3812	3606	3/23/15	4/3/17	Contig	Centers for Disease Control and Prevention	SAMN03169463	GCA_000960225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/225/GCA_000960225.1_ASM96022v1	-	87-0535
Burkholderia glumae LMG 2196 = ATCC 33617	1176492	PRJNA160241	160241	Proteobacteria	Betaproteobacteria	5.77126	67.5	-	AMRF01	998	-	-	10/1/12	1/8/14	Contig	Zhejiang University	SAMN02472175	GCA_000300755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/755/GCA_000300755.1_ASM30075v1	-	LMG 2196
Bacillus megaterium	1404	PRJNA243590	243590	Terrabacteria group	Firmicutes	5.62096	37.7	-	JMQB01	5	5827	5514	9/2/14	4/10/17	Scaffold	Los Alamos National Laboratory	SAMN02739351	GCA_000746935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/935/GCA_000746935.1_BMS	25301645	BMS
Caulobacter vibrioides	155892	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	4.11125	66.9	-	NCDQ01	730	4438	3933	8/16/17	8/16/17	Scaffold	None	SAMN06622368	GCA_002280275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/275/GCA_002280275.1_ASM228027v1	-	-
Enterococcus flavescens ATCC 49996	1158603	PRJNA191900	191900	Terrabacteria group	Firmicutes	3.59225	42.4	-	ASVX01	9	3606	3403	5/31/13	4/1/17	Contig	Broad Institute	SAMN02596949	GCA_000407405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/405/GCA_000407405.1_Ente_flav_ATCC49996_V2	-	ATCC 49996
Muricauda lutaonensis	516051	PRJNA276921	276921	FCB group	Bacteroidetes/Chlorobi group	3.27426	45	chromosome:NZ_CP011071.1/CP011071.1	-	1	3039	2962	3/27/15	4/17/17	Complete Genome	Korea Research Institute of Bioscience and Biotechnology	SAMN03382536	GCA_000963865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/865/GCA_000963865.1_ASM96386v1	-	CC-HSB-11
Desulfitobacterium dehalogenans ATCC 51507	756499	PRJNA61181	61181	Terrabacteria group	Firmicutes	4.32175	45	chromosome:NC_018017.1/CP003348.1	-	1	4212	3974	6/11/12	5/18/17	Complete Genome	JGI	SAMN02261389	GCA_000243155.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/155/GCA_000243155.3_ASM24315v3	25512312	ATCC 51507
Vibrio splendidus	29497	PRJNA302718	302718	Proteobacteria	Gammaproteobacteria	5.58961	44.5	-	LNRG01	74	4975	4765	2/10/16	4/4/17	Contig	University of Cambridge	SAMN04279311	GCA_001557855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/855/GCA_001557855.1_ASM155785v1	-	MARg
Francisella philomiragia subsp. philomiragia ATCC 25015	539329	PRJNA32411	32411	Proteobacteria	Gammaproteobacteria	1.99968	32.6	-	ABYY01	17	1897	1835	12/22/08	3/30/17	Scaffold	Broad Institute	SAMN02595237	GCA_000156715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/715/GCA_000156715.1_ASM15671v1	-	ATCC 25015
[Clostridium] saccharolyticum WM1	610130	PRJNA42097	42097	Terrabacteria group	Firmicutes	4.66287	45	chromosome:NC_014376.1/CP002109.1	-	1	4355	4170	8/5/10	9/3/17	Complete Genome	US DOE Joint Genome Institute	SAMN00017134	GCA_000144625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/625/GCA_000144625.1_ASM14462v1	-	WM1
Xenorhabdus bovienii SS-2004	406818	PRJNA13399	13399	Proteobacteria	Gammaproteobacteria	4.2255	45	chromosome:NC_013892.1/FN667741.1	-	1	3864	3499	2/19/10	3/30/17	Complete Genome	Danforth Science Center	SAMEA3138245	GCA_000027225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/027/225/GCA_000027225.1_ASM2722v1	22125637	SS-2004
Chloroherpeton thalassium ATCC 35110	517418	PRJNA29215	29215	FCB group	Bacteroidetes/Chlorobi group	3.29346	45	chromosome:NC_011026.1/CP001100.1	-	1	2853	2776	6/27/08	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598461	GCA_000020525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/525/GCA_000020525.1_ASM2052v1	-	ATCC 35110
Haemophilus parasuis str. Nagasaki	1117322	PRJNA184177	184177	Proteobacteria	Gammaproteobacteria	2.1786	39.9	-	APBT01	78	2273	2026	8/7/13	4/10/17	Contig	Iowa State University	SAMN02470065	GCA_000444545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/545/GCA_000444545.1_ASM44454v1	24051319	Nagasaki
Vibrio natriegens	691	PRJNA327130	327130	Proteobacteria	Gammaproteobacteria	5.16145	44.9925	chromosome 1:NZ_CP016347.1/CP016347.1; chromosome 2:NZ_CP016348.1/CP016348.1	-	2	4722	4472	7/6/16	4/5/17	Complete Genome	"Synthetic Genomics, Inc."	SAMN05302748	GCA_001680045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/045/GCA_001680045.1_ASM168004v1	-	CCUG 16371
Helicobacter pullorum	35818	PRJNA326802	326802	Proteobacteria	delta/epsilon subdivisions	1.85636	34.1	-	MAJG01	130	1865	1737	8/4/16	4/5/17	Contig	University of Hyderabad	SAMN05292889	GCA_001698685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/685/GCA_001698685.1_ASM169868v1	-	NAP12B32
Streptococcus equi subsp. zooepidemicus SzAM35	1381090	PRJNA214018	214018	Terrabacteria group	Firmicutes	2.02401	41.5	-	JATY01	134	1939	1792	2/17/15	3/25/17	Contig	Copenhagen University	SAMN02298723	GCA_000876275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/275/GCA_000876275.1_ASM87627v1	-	SzAM35
Micrococcus luteus	1270	PRJNA265206	265206	Terrabacteria group	Actinobacteria	2.43123	73.1	-	JTKE01	112	2221	2106	1/26/15	4/3/17	Contig	Florida A&M University	SAMN03151542	GCA_000828165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/165/GCA_000828165.1_ASM82816v1	-	2385
Alteromonas macleodii	28108	PRJNA269560	269560	Proteobacteria	Gammaproteobacteria	4.6179	44.7	-	JWLY01	44	4007	3907	12/29/14	4/2/17	Contig	University of Malaya	SAMN03254453	GCA_000808635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/635/GCA_000808635.1_ASM80863v1	-	AD037
Bifidobacterium bifidum	1681	PRJNA272088	272088	Terrabacteria group	Actinobacteria	2.26235	62.8	-	LRPO01	34	1973	1814	2/2/16	4/4/17	Scaffold	The Genome Institute at Washington University	SAMN03842220	GCA_001546225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/225/GCA_001546225.1_ASM154622v1	-	MJR8628B
Yersinia kristensenii	28152	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.6138	47.4	-	CQAG01	33	4278	4074	3/23/15	4/3/17	Scaffold	SC	SAMEA859938	GCA_001091065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/065/GCA_001091065.1_4821_5_4	-	FCF221
Yersinia frederiksenii	29484	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.92883	47.4	-	CPWN01	21	4562	4373	3/23/15	4/3/17	Scaffold	SC	SAMEA859959	GCA_001098625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/625/GCA_001098625.1_5139_5_4	-	FE80258
Bacillus mycoides	1405	PRJNA243594	243594	Terrabacteria group	Firmicutes	5.87592	35.3	-	JMQC01	12	6206	5470	9/2/14	4/2/17	Contig	Los Alamos National Laboratory	SAMN02739899	GCA_000746925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/925/GCA_000746925.1_BHP_1	25301645	BHP
Comamonas testosteroni	285	PRJDB2973	255378	Proteobacteria	Betaproteobacteria	5.40647	61.5	-	BBJZ01	65	4956	4775	8/2/14	4/2/17	Contig	National Institute of Technology and Evaluation	SAMD00018645	GCA_000740035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/035/GCA_000740035.1_ASM74003v1	-	NBRC 14951
Paenibacillus larvae subsp. larvae DSM 25430	697284	PRJNA42205	42205	Terrabacteria group	Firmicutes	4.05601	44.9812	chromosome:NC_023134.1/CP003355.1; plasmid pPLA2_10:NC_023147.1/CP003356.1	-	2	4060	3661	12/20/13	4/2/17	Complete Genome	Georg-August-University Goettingen	SAMN02641512	GCA_000511405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/405/GCA_000511405.1_ASM51140v1	24599066	DSM 25430
Ruminiclostridium thermocellum BC1	1349417	PRJEB4206	223245	Terrabacteria group	Firmicutes	3.45218	39.1	-	CBQO01	139	3078	2882	10/18/13	4/2/17	Contig	CEBITEC	SAMEA2272005	GCA_000493655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/655/GCA_000493655.1_BC1	-	-
Rhizobium etli CNPAF512	993047	PRJNA63387	63387	Proteobacteria	Alphaproteobacteria	6.72612	61.3	-	AEYZ01	402	6574	6174	3/29/11	5/19/17	Contig	"CMPG, Katholieke Universiteit,  Leuven"	SAMN02469445	GCA_000194195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/195/GCA_000194195.2_RhECNPAF512_1.0	21515775	CNPAF512
Vibrio harveyi	669	PRJNA260398	260398	Proteobacteria	Gammaproteobacteria	5.88149	44.9616	chromosome 1:NZ_CP009467.1/CP009467.2; chromosome 2:NZ_CP009468.1/CP009468.1	-	2	5521	5234	10/31/14	4/5/17	Complete Genome	NRL	SAMN03075601	GCA_000770115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/115/GCA_000770115.2_ASM77011v2	25635019	ATCC 33843 (392 [MAV])
Vibrio natriegens	691	PRJNA327130	327130	Proteobacteria	Gammaproteobacteria	5.54922	44.9152	chromosome 1:NZ_CP016349.1/CP016349.1; chromosome 2:NZ_CP016350.1/CP016350.1	-	2	5099	4814	7/6/16	4/5/17	Complete Genome	"Synthetic Genomics, Inc."	SAMN05302750	GCA_001680065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/065/GCA_001680065.1_ASM168006v1	-	CCUG 16373
Alteromonas mediterranea 615	1300253	PRJNA192229	192229	Proteobacteria	Gammaproteobacteria	4.58235	44.908	chromosome:CP004846.1; plasmid unnamed:CP004847.1	-	2	3644	3560	7/8/13	9/6/17	Complete Genome	University Miguel Hernandez	SAMN02604124	GCA_000439475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/475/GCA_000439475.1_ASM43947v1	-	English Channel 615
Lactobacillus plantarum	1590	PRJNA379903	379903	Terrabacteria group	Firmicutes	3.04039	44.9	chromosome:NZ_CP020564.1/CP020564.1	-	1	2930	2729	7/18/17	7/21/17	Complete Genome	seoul national university	SAMN06622701	GCA_002220815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/815/GCA_002220815.1_ASM222081v1	28621109	GB-LP1
Thermococcus chitonophagus	54262	PRJNA274230	274230	Euryarchaeota	Thermococci	1.96198	44.9	chromosome:NZ_CP015193.1/CP015193.1	-	1	2180	2062	7/5/17	7/7/17	Complete Genome	Ecole Normale Superieure de Lyon	SAMN03324156	GCA_002214605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/605/GCA_002214605.1_ASM221460v1	-	GC74
Streptococcus mutans TCI-101	1074113	PRJNA71977	71977	Terrabacteria group	Firmicutes	1.81619	37	-	AGKF01	141	1868	1740	10/6/11	3/22/17	Contig	JCVI	SAMN02436614	GCA_000228745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/745/GCA_000228745.2_SMUT4-NEX_2-101	-	TCI-101
Borrelia garinii IPT94	1408832	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.16545	27.8	-	AYAH01	243	1139	598	12/3/13	4/2/17	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378799	GCA_000501015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/015/GCA_000501015.1_BorGarIPT94	-	IPT94
Streptococcus dysgalactiae subsp. equisimilis SK1249	1000589	PRJNA64681	64681	Terrabacteria group	Firmicutes	2.16037	39.5	-	AFIN01	231	2215	1988	5/23/11	3/30/17	Contig	J. Craig Venter Institute	SAMN00621722	GCA_000214575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/575/GCA_000214575.2_ASM21457v2	-	SK1249
Bifidobacterium dentium JCM 1195 = DSM 20436	1150423	PRJEB16375	349321	Terrabacteria group	Actinobacteria	2.66807	58.6	-	FNSE01	2	2267	2152	10/22/16	4/5/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05192536	GCA_900105745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/745/GCA_900105745.1_IMG-taxon_2634166294_annotated_assembly	-	DSM 20436
Methanobrevibacter smithii TS146D	911121	PRJNA59655	59655	Euryarchaeota	Methanobacteria	1.71326	31.1	-	AELP01	33	1658	1524	2/17/11	3/30/17	Contig	Washington University in St.Louis	SAMN02436666	GCA_000189895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/895/GCA_000189895.2_ASM18989v2	21317366	TS146D
Microcystis aeruginosa PCC 7941	213618	PRJEA88175	88175	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.8019	42.6	-	CAIK01	77	4755	4337	5/28/12	3/31/17	Scaffold	Genoscope CEA	SAMEA2272182	GCA_000312205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/205/GCA_000312205.1_ASM31220v1	-	7941
Bradyrhizobium japonicum USDA 38	1079467	PRJNA165321	165321	Proteobacteria	Alphaproteobacteria	9.60897	63.5	-	AXAG01	107	9225	8760	9/30/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02440784	GCA_000472745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/745/GCA_000472745.1_ASM47274v1	-	USDA 38
Thermococcus chitonophagus	54262	PRJEB12305	318679	Euryarchaeota	Thermococci	1.96965	44.9	chromosome I:NZ_LN999010.1/LN999010.1	-	1	2191	2076	4/16/16	4/17/17	Complete Genome	University of Athens	SAMEA3721282	GCA_900012635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/635/GCA_900012635.1_Pyrococcus_chitonophagus_genome_sequence	-	-
Lactobacillus plantarum	1590	PRJNA284878	284878	Terrabacteria group	Firmicutes	2.95222	44.9	chromosome:NZ_CP011769.1/CP011769.1	-	1	2860	2650	3/8/16	3/27/17	Complete Genome	Beijing University of Agricultrue	SAMN03734222	GCA_001581895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/895/GCA_001581895.1_ASM158189v1	-	Zhang-LL
Brucella canis	36855	PRJNA338967	338967	Proteobacteria	Alphaproteobacteria	3.31388	57.2364	chromosome 1:NZ_CP016975.1/CP016975.1; chromosome 2:NZ_CP016976.1/CP016976.1	-	2	3363	3155	8/29/16	4/5/17	Chromosome	Viginia Tech University	SAMN05578250	GCA_001715445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/445/GCA_001715445.1_ASM171544v1	-	2009013648
Clavibacter michiganensis subsp. nebraskensis	31963	PRJNA278674	278674	Terrabacteria group	Actinobacteria	3.05979	73	-	LAKL01	28	2928	2793	3/31/15	4/3/17	Contig	Eastern Cereal and Oilseed Research Centre	SAMN03435930	GCA_000966585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/585/GCA_000966585.1_ASM96658v1	26159537	DOAB 397
Vibrio harveyi	669	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	6.03888	44.9	chromosome 1:NZ_CP014038.1/CP014038.1; chromosome 2:NZ_CP014039.1/CP014039.1	-	2	5670	5359	2/11/16	4/4/17	Complete Genome	US Food and Drug Administration 	SAMN03996323	GCA_001558435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/435/GCA_001558435.1_ASM155843v1	-	ATCC 43516
Ochrobactrum anthropi	529	PRJNA286065	286065	Proteobacteria	Alphaproteobacteria	4.37595	54	-	LUAY01	8113	2197	1642	3/10/16	3/10/16	Contig	SaurashtraUniversity	SAMN03764499	GCA_001586735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/735/GCA_001586735.1_ASM158673v1	-	SUBG007
Ignicoccus islandicus DSM 13165	940295	PRJNA61347	61347	TACK group	Crenarchaeota	1.39466	44.9	chromosome:NZ_CP006867.1/CP006867.1	-	1	1536	1478	12/23/15	4/16/17	Complete Genome	Oak Ridge National Laboratory	SAMN04316368	GCA_001481685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/685/GCA_001481685.1_ASM148168v1	-	DSM 13165
Treponema pallidum str. Fribourg-Blanc	1155775	PRJNA86661	86661	Spirochaetes	Spirochaetia	1.14048	52.8	chromosome:NC_021179.1/CP003902.1	-	1	1067	1004	5/2/13	4/1/17	Chromosome	The Genome Institute	SAMN03081442	GCA_000387485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/485/GCA_000387485.1_ASM38748v1	23638193	Fribourg-Blanc
Alteromonas australica	589873	PRJNA246140	246140	Proteobacteria	Gammaproteobacteria	4.45747	44.9	chromosome:NZ_CP010912.1/CP010912.1	-	1	3966	3421	2/25/15	4/10/17	Complete Genome	University Miguel Hernandez	SAMN02743544	GCA_000934525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/525/GCA_000934525.1_ASM93452v1	-	DE170
Burkholderia multivorans CGD1	513051	PRJNA30579	30579	Proteobacteria	Betaproteobacteria	6.62172	67	-	ACFB01	34	6249	5928	1/22/09	7/9/17	Contig	J. Craig Venter Institute	SAMN02436263	GCA_000182255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/182/255/GCA_000182255.1_JCVI-gbv1-v1.0	23105085	CGD1
Alteromonas australica	589873	PRJNA246143	246143	Proteobacteria	Gammaproteobacteria	4.30883	44.9	chromosome:NZ_CP008849.1/CP008849.1	-	1	3786	3679	7/17/14	4/9/17	Complete Genome	University Miguel Hernandez	SAMN02743545	GCA_000730385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/385/GCA_000730385.1_ASM73038v1	-	H 17
Mucinivorans hirudinis	1433126	PRJEB5062	252820	FCB group	Bacteroidetes/Chlorobi group	3.14923	44.9	chromosome I:NZ_HG934468.1/HG934468.1	-	1	2862	2743	6/15/14	4/9/17	Complete Genome	UCONNMISEQ	SAMEA3139033	GCA_000723505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/505/GCA_000723505.1_Mucivorans_M3_Nelson-Bomar-Fixed	25657285	-
Alteromonas mediterranea U8	1300257	PRJNA192230	192230	Proteobacteria	Gammaproteobacteria	4.39504	44.9	chromosome:NC_021712.1/CP004852.1	-	1	3870	3653	7/8/13	9/10/17	Complete Genome	University Miguel Hernandez	SAMN02604125	GCA_000439555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/555/GCA_000439555.1_ASM43955v1	23729633	U8
Aliivibrio fischeri	668	PRJNA311605	311605	Proteobacteria	Gammaproteobacteria	4.53776	38	-	LTYY01	78	4228	4082	5/9/16	4/5/17	Contig	MIT	SAMN04519655	GCA_001640385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/385/GCA_001640385.1_ASM164038v1	27128997	Mb11B1
Alteromonas mediterranea UM4b	1300259	PRJNA192232	192232	Proteobacteria	Gammaproteobacteria	4.43877	44.9	chromosome:NC_021714.1/CP004855.1	-	1	3928	3744	7/8/13	9/10/17	Complete Genome	University Miguel Hernandez	SAMN02604127	GCA_000439595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/595/GCA_000439595.1_ASM43959v1	23729633	UM4b
Ureaplasma urealyticum serovar 12 str. ATCC 33696	550747	PRJNA19419	19419	Terrabacteria group	Tenericutes	0.844514	25.9	-	AAZT01	5	689	638	4/24/07	3/30/17	Contig	TIGR	SAMN02435858	GCA_000169955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/955/GCA_000169955.1_ASM16995v1	-	ATCC 33696
Ureaplasma parvum serovar 6 str. ATCC 27818	519851	PRJNA19413	19413	Terrabacteria group	Tenericutes	0.772971	25.8	-	AAZQ01	5	643	586	4/24/07	4/7/17	Contig	TIGR	SAMN02435847	GCA_000169895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/895/GCA_000169895.1_ASM16989v1	-	ATCC 27818
Porphyromonas gingivalis F0568	1227269	PRJNA173937	173937	FCB group	Bacteroidetes/Chlorobi group	2.33474	48.4	-	AWUU01	154	2096	1918	9/16/13	4/1/17	Scaffold	Washington University	SAMN02436723	GCA_000467795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/795/GCA_000467795.1_ASM46779v1	-	F0568
Niastella koreensis GR20-10	700598	PRJNA42711	42711	FCB group	Bacteroidetes/Chlorobi group	9.03368	44.9	chromosome:NC_016609.1/CP003178.1	-	1	7296	7170	12/14/11	4/7/17	Complete Genome	DOE Joint Genome Institute	SAMN02232043	GCA_000246855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/855/GCA_000246855.1_ASM24685v1	-	GR20-10
Vibrio antiquarius	150340	PRJNA40507	40507	Proteobacteria	Gammaproteobacteria	5.08903	44.9	chromosome 1:NC_013456.1/CP001805.1; chromosome 2:NC_013457.1/CP001806.1	-	2	4777	4540	11/3/09	9/3/17	Complete Genome	"Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR)"	SAMN02603570	GCA_000024825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/825/GCA_000024825.1_ASM2482v1	-	EX25
Orientia tsutsugamushi	784	PRJNA322209	322209	Proteobacteria	Alphaproteobacteria	1.43757	30	-	LYMB01	485	1394	976	6/2/16	4/5/17	Contig	"Center for Biologics Evaluation and Research, Food and Drug Administration"	SAMN05076339	GCA_001654775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/654/775/GCA_001654775.1_ASM165477v1	-	AFSC7
Alteromonas mediterranea DE	1774373	PRJNA13374	13374	Proteobacteria	Gammaproteobacteria	4.48094	44.9	chromosome:NC_011138.3/CP001103.3	-	1	4021	3773	8/14/08	8/28/17	Complete Genome	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02603915	GCA_000020585.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/585/GCA_000020585.3_ASM2058v3	"1,867,039,725,326,790"	DE
Lactococcus garvieae TB25	1091040	PRJNA73569	73569	Terrabacteria group	Firmicutes	2.00889	38.1	-	AGQX01	91	2017	1895	12/1/11	4/4/17	Contig	"University of Milan, Department of Food Science and Microbiology"	SAMN02471887	GCA_000236515.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/515/GCA_000236515.3_LgarvieTb25_1.0	22328751	TB25
Bifidobacterium adolescentis	1680	PRJNA280952	280952	Terrabacteria group	Actinobacteria	2.31566	59.4	-	LBHQ01	34	1979	1844	5/20/15	4/3/17	Contig	Vavilov Institute of General Genetics	SAMN03468113	GCA_001010915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/915/GCA_001010915.1_ASM101091v1	26139716	150
Vibrio harveyi 1DA3	673519	PRJNA40361	40361	Proteobacteria	Gammaproteobacteria	5.93002	45.6	-	ACZC01	140	5538	5070	11/23/09	5/19/17	Contig	LNCC/UFRJ/CBS	SAMN02470250	GCA_000182685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/182/685/GCA_000182685.1_ASM18268v1	19860885	1DA3
Faecalibacterium prausnitzii L2-6	718252	PRJNA45961	45961	Terrabacteria group	Firmicutes	3.32137	56.6	chromosome:FP929045.1	-	1	2820	2756	3/25/10	2/27/15	Chromosome	metaHIT	SAMEA3138378	GCA_000210735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/735/GCA_000210735.1_ASM21073v1	-	L2/6
Borrelia afzelii IPT109	1408883	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.07824	27.9	-	AYCG01	537	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378850	GCA_000501555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/555/GCA_000501555.1_BorAfzIPT109	-	IPT109
Photobacterium damselae subsp. damselae	85581	PRJNA323423	323423	Proteobacteria	Gammaproteobacteria	4.273	40.8	-	LZFN01	203	3731	3598	9/15/16	4/5/17	Contig	Universidade de Santiago de Compostela	SAMN05178634	GCA_001729115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/115/GCA_001729115.1_ASM172911v1	-	A-162
Actinobacillus succinogenes 130Z	339671	PRJNA13370	13370	Proteobacteria	Gammaproteobacteria	2.31966	44.9	chromosome:NC_009655.1/CP000746.1	-	1	2210	2101	7/5/07	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598296	GCA_000017245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/245/GCA_000017245.1_ASM1724v1	-	130Z
Geobacillus stearothermophilus	1422	PRJNA270597	270597	Terrabacteria group	Firmicutes	2.76668	52.8	-	LQYY01	161	2983	2576	3/11/16	4/5/17	Scaffold	University of Groningen	SAMN03267294	GCA_001587395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/395/GCA_001587395.1_B4114	27151781	B4114
Ralstonia pickettii	329	PRJNA335691	335691	Proteobacteria	Betaproteobacteria	5.20029	64	-	MCGA01	40	4924	4666	8/5/16	4/5/17	Contig	Universidade Catolica Portuguesa	SAMN05450312	GCA_001699795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/795/GCA_001699795.1_ASM169979v1	-	H2Cu2
Syntrophomonas wolfei subsp. wolfei str. Goettingen G311	335541	PRJNA13014	13014	Terrabacteria group	Firmicutes	2.9362	44.9	chromosome:NC_008346.1/CP000448.1	-	1	2677	2568	9/14/06	4/6/17	Complete Genome	DOE Joint Genome Institute	SAMN02598286	GCA_000014725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/725/GCA_000014725.1_ASM1472v1	-	Goettingen G311
Salinispora arenicola CNX481	1169169	PRJNA175175	175175	Terrabacteria group	Actinobacteria	5.57097	69.6	-	ARHB01	73	5090	4761	4/19/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441354	GCA_000375085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/085/GCA_000375085.1_ASM37508v1	-	CNX481
Psychrobacter sp. PRwf-1	349106	PRJNA15759	15759	Proteobacteria	Gammaproteobacteria	2.99505	44.8661	chromosome:NC_009524.1/CP000713.1; plasmid pRWF101:NC_009516.1/CP000714.1; plasmid pRWF102:NC_009517.1/CP000715.1	-	3	2485	2374	6/4/07	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598345	GCA_000016885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/885/GCA_000016885.1_ASM1688v1	-	PRwf-1
Vibrio sp. EJY3	1116375	PRJNA77223	77223	Proteobacteria	Gammaproteobacteria	5.45265	44.8552	chromosome 1:NC_016613.1/CP003241.1; chromosome 2:NC_016614.1/CP003242.1	-	2	5027	4781	1/5/12	5/19/17	Complete Genome	Computational & Synthetic Biology Laboratory	SAMN02603160	GCA_000241385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/385/GCA_000241385.1_ASM24138v1	22535948	EJY3
Vibrio rotiferianus	190895	PRJNA355548	355548	Proteobacteria	Gammaproteobacteria	5.27786	44.8521	chromosome 1:NZ_CP018311.1/CP018311.1; chromosome 2:NZ_CP018312.1/CP018312.1	-	2	4940	4655	7/5/17	7/7/17	Complete Genome	Ocean University of China	SAMN06076929	GCA_002214395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/395/GCA_002214395.1_ASM221439v1	-	B64D1
Polynucleobacter asymbioticus	576611	PRJNA295639	295639	Proteobacteria	Betaproteobacteria	2.22161	44.8	chromosome:NZ_CP015018.1/CP015018.1	-	1	2217	2160	11/10/16	4/5/17	Complete Genome	University of Innsbruck	SAMN04083114	GCA_001874585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/585/GCA_001874585.1_ASM187458v1	-	Tro8F10W22
Salinispora tropica CNH898	1137248	PRJNA169709	169709	Terrabacteria group	Actinobacteria	5.53298	69.4	-	AZXH01	114	5178	4771	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597264	GCA_000515155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/155/GCA_000515155.1_ASM51515v1	-	CNH898
Aeromonas salmonicida	645	PRJNA264317	264317	Proteobacteria	Gammaproteobacteria	4.73641	58.6	-	JZTH01	104	4461	4109	12/15/15	4/4/17	Scaffold	Universite Laval	SAMN03395037	GCA_001481545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/545/GCA_001481545.2_ASM148154v2	26753691	Y577
Streptococcus mitis SK564	585203	PRJNA33355	33355	Terrabacteria group	Firmicutes	2.0269	39.7	-	AEDU01	35	2095	1932	9/24/10	3/30/17	Contig	University of Maryland Institute for Genome Sciences	SAMN00001434	GCA_000148525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/525/GCA_000148525.2_ASM14852v1	-	SK564
Oenococcus oeni AWRIB422	1206771	PRJNA169940	169940	Terrabacteria group	Firmicutes	1.81453	37.9	-	ALAG01	32	1867	1678	8/9/12	3/23/17	Contig	The Australian Wine Research Institute	SAMN02471123	GCA_000286175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/175/GCA_000286175.1_AWRIB422_v1	22863143	AWRIB422
Aneurinibacillus sp. XH2	1450761	PRJNA287204	287204	Terrabacteria group	Firmicutes	3.66484	44.8	chromosome:NZ_CP014140.1/CP014140.1	-	1	3732	3476	1/25/16	4/11/17	Complete Genome	China University of Petroleum	SAMN03777308	GCA_001439585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/585/GCA_001439585.2_ASM143958v2	-	Xh2
Alteromonas mediterranea MED64	1300254	PRJNA191599	191599	Proteobacteria	Gammaproteobacteria	4.39754	44.8	chromosome:NC_023045.1/CP004848.1	-	1	3894	3710	7/8/13	9/10/17	Complete Genome	University Miguel Hernandez	SAMN02604122	GCA_000439495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/495/GCA_000439495.1_ASM43949v1	23729633	MED64
Alteromonas mediterranea U7	1300256	PRJNA192694	192694	Proteobacteria	Gammaproteobacteria	4.44294	44.8	chromosome:NC_021717.1/CP004851.1	-	1	3916	3716	7/8/13	9/10/17	Complete Genome	University Miguel Hernandez	SAMN02604128	GCA_000439535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/535/GCA_000439535.1_ASM43953v1	23729633	U7
Bartonella bacilliformis CUSCO5	1293910	PRJNA189519	189519	Proteobacteria	Alphaproteobacteria	1.40165	38.3	-	ASIT01	4	1225	1128	6/17/14	4/3/17	Scaffold	Broad Institute	SAMN01921143	GCA_000709755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/755/GCA_000709755.1_Bart_baci_CUSCO5_V1	-	CUSCO5
Mycoplasma capricolum subsp. capripneumoniae 99108	1188243	PRJNA164785	164785	Terrabacteria group	Tenericutes	1.00633	23.6	-	JMJI01	63	906	688	7/18/14	4/2/17	Contig	EVOLMYCO	SAMN02741410	GCA_000731685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/685/GCA_000731685.1_ASM73168v1	-	99108
Leptospira borgpetersenii serovar Hardjo	328971	PRJNA296689	296689	Spirochaetes	Spirochaetia	3.93249	40.4919	chromosome 1:NZ_CP015050.1/CP015050.1; chromosome 2:NZ_CP015051.1/CP015051.1	-	2	3841	3185	4/11/16	4/5/17	Chromosome	INDICASAT-AIP	SAMN04102142	GCA_001618585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/585/GCA_001618585.1_ASM161858v1	-	NVSL S 1343
Echinicola vietnamensis DSM 17526	926556	PRJNA65035	65035	FCB group	Bacteroidetes/Chlorobi group	5.60804	44.8	chromosome:NC_019904.1/CP003346.1	-	1	4587	4466	12/19/12	5/18/17	Complete Genome	DOE Joint Genome Institute	SAMN02232018	GCA_000325705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/705/GCA_000325705.1_ASM32570v1	-	DSM 17526
Alteromonas macleodii str. 'English Channel 673'	1004788	PRJNA65407	65407	Proteobacteria	Gammaproteobacteria	4.60178	44.8	chromosome:NC_018678.1/CP003844.1	-	1	3992	3844	9/28/12	5/18/17	Complete Genome	University Miguel Hernandez	SAMN02604121	GCA_000299955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/955/GCA_000299955.1_ASM29995v1	-	English Channel 673
Desulfurococcus amylolyticus DSM 16532	768672	PRJNA49401	49401	TACK group	Crenarchaeota	1.38412	44.8	chromosome:NC_018001.1/CP003321.1	-	1	1493	1422	6/7/12	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02232017	GCA_000231015.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/015/GCA_000231015.3_ASM23101v3	23012283	DSM 16532
Paenibacillus polymyxa M1	1052684	PRJEA68665	68665	Terrabacteria group	Firmicutes	6.23112	44.8	chromosome:NC_017542.1/HE577054.1; plasmid pPPM1a:NC_017543.1/HE577055.1	-	2	5706	5408	8/5/11	5/19/17	Complete Genome	"Center for Biotechnology, Bielefeld University"	SAMEA2272483	GCA_000237325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/325/GCA_000237325.1_ASM23732v1	21952539	M1
Rhodobacter sphaeroides 2.4.1	272943	PRJNA40077	40077	Proteobacteria	Alphaproteobacteria	4.6066	68.7851	chromosome 1:NZ_AKBU01000001.1/AKBU01000001.1; chromosome 2:NZ_AKBU01000002.1/AKBU01000002.1; plasmid Ax:NZ_AKBU01000003.1/AKBU01000003.1; plasmid B:NZ_AKBU01000004.1/AKBU01000004.1; plasmid C:NZ_AKBU01000005.1/AKBU01000005.1	AKBU01	11	4517	4380	6/15/12	5/19/17	Chromosome	Broad Institute	SAMN02596919	GCA_000269625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/625/GCA_000269625.2_PB_Rhod_Spha_2_4_1_V1	22829535	2.4.1
Coprothermobacter proteolyticus DSM 5265	309798	PRJNA30729	30729	Terrabacteria group	Firmicutes	1.42491	44.8	chromosome:NC_011295.1/CP001145.1	-	1	1473	1409	9/26/08	4/17/17	Complete Genome	The J. Craig Venter Institute	SAMN02603927	GCA_000020945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/945/GCA_000020945.1_ASM2094v1	24831154	DSM 5265
Polynucleobacter asymbioticus QLW-P1DMWA-1	312153	PRJNA16679	16679	Proteobacteria	Betaproteobacteria	2.15949	44.8	chromosome:NC_009379.1/CP000655.1	-	1	2167	2113	4/12/07	3/30/17	Complete Genome	DOE Joint Genome Institute	SAMN02598371	GCA_000016345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/345/GCA_000016345.1_ASM1634v1	"2,244,822,722,675,600"	QLW-P1DMWA-1
Shigella boydii 08-0009	1118236	PRJNA171079	171079	Proteobacteria	Gammaproteobacteria	4.86423	51	-	AMJZ01	165	5389	4419	1/6/15	8/4/17	Contig	Institute for Genome Sciences	SAMN03276475	GCA_000815685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/685/GCA_000815685.1_ASM81568v1	-	08-0009
Bacillus clausii KSM-K16	66692	PRJNA13291	13291	Terrabacteria group	Firmicutes	4.30387	44.8	chromosome:NC_006582.1/AP006627.1	-	1	4322	4171	12/10/04	4/6/17	Complete Genome	"Kao Corporation, Biological Science Laboratories, Japan"	SAMD00061074	GCA_000009825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/825/GCA_000009825.1_ASM982v1	"7,632,397,927,827,510,000,000"	KSM-K16
Lactobacillus plantarum	1590	PRJNA309633	309633	Terrabacteria group	Firmicutes	3.12878	44.7686	chromosome:NZ_CP015308.1/CP015308.1; plasmid pLY7801:NZ_CP016631.1/CP016631.1	-	2	3023	2835	8/29/16	3/28/17	Complete Genome	Heilongjiang Bayi Agricultural University	SAMN04437173	GCA_001715615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/615/GCA_001715615.1_ASM171561v1	-	LY-78
Candidatus Pelagibacter ubique HTCC1040	1118158	PRJNA163047	163047	Proteobacteria	Alphaproteobacteria	1.27462	29.5	-	ARVY01	1	1361	1320	4/26/13	4/1/17	Contig	DOE Joint Genome Institute	SAMN02256395	GCA_000384455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/455/GCA_000384455.1_ASM38445v1	-	HTCC1040
Vibrio natriegens	691	PRJNA327130	327130	Proteobacteria	Gammaproteobacteria	5.50468	44.7657	chromosome 1:NZ_CP016351.1/CP016351.1; chromosome 2:NZ_CP016352.1/CP016352.1	-	2	5024	4737	7/6/16	4/5/17	Complete Genome	"Synthetic Genomics, Inc."	SAMN05302751	GCA_001680085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/085/GCA_001680085.1_ASM168008v1	-	CCUG 16374
Corynebacterium jeikeium	38289	PRJNA238244	238244	Terrabacteria group	Actinobacteria	2.41124	61.9	-	JFCK01	263	2139	1968	8/6/14	4/2/17	Contig	University of Washington	SAMN02641054	GCA_000738245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/245/GCA_000738245.1_Cj30184	25116839	Cj30184
Xenorhabdus bovienii	40576	PRJEB5289	274758	Proteobacteria	Gammaproteobacteria	4.82067	44.7654	chromosome:NZ_FO818637.1/FO818637.1; plasmid XBC_p:NZ_FO818639.1/FO818639.1; plasmid megaplasmid:NZ_FO818638.1/FO818638.1	-	3	4516	4090	2/6/15	4/10/17	Complete Genome	GENOSCOPE CEA	SAMEA3283115	GCA_000973125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/125/GCA_000973125.1_ASM97312v1	-	CS03
Vibrio scophthalmi	45658	PRJNA325197	325197	Proteobacteria	Gammaproteobacteria	4.80285	44.7633	chromosome 1:NZ_CP016414.1/CP016414.1; chromosome 2:NZ_CP016415.1/CP016415.1; plasmid pVS127:NZ_CP016416.1/CP016416.1; plasmid pVS8:NZ_CP016417.1/CP016417.1	-	4	4395	4105	7/20/16	4/13/17	Complete Genome	National Institute of Fisheries Science	SAMN05225356	GCA_001687805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/805/GCA_001687805.1_ASM168780v1	-	VS-05
Nitrosomonas sp. AL212	153948	PRJNA32989	32989	Proteobacteria	Betaproteobacteria	3.33702	44.7559	chromosome:NC_015222.1/CP002552.1; plasmid pNAL21201:NC_015223.1/CP002553.1; plasmid pNAL21202:NC_015221.1/CP002554.1	-	3	3184	2996	3/9/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002570	GCA_000175095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/095/GCA_000175095.2_ASM17509v2	-	AL212
Thermus thermophilus	274	PRJNA348753	348753	Terrabacteria group	Deinococcus-Thermus	2.12357	68.5	-	DFSP01	106	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454011	GCA_002378965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/965/GCA_002378965.1_ASM237896v1	28894102	-
Weissella cibaria	137591	PRJNA297257	297257	Terrabacteria group	Firmicutes	2.57773	44.7462	chromosome:NZ_CP012873.1/CP012873.1; plasmid pMKC01:NZ_CP012874.1/CP012874.1; plasmid pMKC02:NZ_CP012875.1/CP012875.1; plasmid pMKC03:NZ_CP012876.1/CP012876.1; plasmid pMKC04:NZ_CP012877.1/CP012877.1; plasmid pMKC05:NZ_CP012878.1/CP012878.1; plasmid pMKC07:NZ_CP012880.1/CP012880.1	-	7	2475	2242	10/8/15	4/5/17	Complete Genome	CSIR-Institute of Himalayan Bioresource Technology	SAMN04120644	GCA_001308145.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/308/145/GCA_001308145.2_ASM130814v2	-	CH2
Bacillus clausii	79880	PRJNA376814	376814	Terrabacteria group	Firmicutes	4.51746	44.7	chromosome:NZ_CP019985.1/CP019985.1	-	1	4441	4251	8/14/17	8/16/17	Complete Genome	Kyungpook National University	SAMN06458367	GCA_002250115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/115/GCA_002250115.1_ASM225011v1	-	DSM 8716
Vibrio anguillarum	55601	PRJNA317927	317927	Proteobacteria	Gammaproteobacteria	3.09709	44.7	chromosome:NZ_CP016095.1/CP016095.1	-	1	2890	2722	6/2/17	9/19/17	Complete Genome	East China University of Science and Technology	SAMN04631738	GCA_002163795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/795/GCA_002163795.1_ASM216379v1	-	MVAV6203
Polynucleobacter asymbioticus	576611	PRJNA266917	266917	Proteobacteria	Betaproteobacteria	2.35539	44.7	chromosome:NZ_CP015016.1/CP015016.1	-	1	2361	2290	11/10/16	4/5/17	Complete Genome	University of Innsbruck	SAMN04575156	GCA_001874545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/545/GCA_001874545.1_ASM187454v1	-	MWH-RechtKolB
Polynucleobacter asymbioticus	576611	PRJNA295639	295639	Proteobacteria	Betaproteobacteria	2.38256	44.7	chromosome:NZ_CP015017.1/CP015017.1	-	1	2385	2314	11/10/16	4/5/17	Complete Genome	University of Innsbruck	SAMN04086670	GCA_001874565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/565/GCA_001874565.1_ASM187456v1	-	MWH-RechtKol4
Lactobacillus plantarum	1590	PRJNA291681	291681	Terrabacteria group	Firmicutes	3.19834	44.7	chromosome:NZ_CP012343.1/CP012343.1	-	1	3077	2916	9/22/15	3/26/17	Complete Genome	Jiangnan University	SAMN03952027	GCA_001296095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/095/GCA_001296095.1_ASM129609v1	-	ZS2058
Ehrlichia ruminantium	779	PRJDB4736	320920	Proteobacteria	Alphaproteobacteria	1.45366	27.5	-	BDDL01	118	996	867	5/3/16	4/5/17	Contig	Graduate School of Veterinary Medicine Hokkaido University	SAMD00050888	GCA_001686285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/285/GCA_001686285.1_ER_KSE_1.0	27313287	Kerr Seringe
Shewanella baltica OS183	693971	PRJNA50319	50319	Proteobacteria	Gammaproteobacteria	5.04993	46.1	chromosome:NZ_CM001435.1/CM001435.1	AECY02	1	4435	4213	8/20/10	5/19/17	Chromosome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02256524	GCA_000179535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/535/GCA_000179535.2_ASM17953v2	22328742	OS183
Shigella dysenteriae WRSd3	1401327	PRJNA219327	219327	Proteobacteria	Gammaproteobacteria	4.19769	50.7	-	AXUT01	778	4575	3751	11/25/13	8/4/17	Scaffold	Igenbio Inc	SAMN03083602	GCA_000499065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/065/GCA_000499065.1_XNQ_WAC	-	WRSd3
Anaplasma marginale str. Florida	320483	PRJNA64631	64631	Proteobacteria	Alphaproteobacteria	1.13698	49.8	-	AFMS01	204	1025	786	5/31/11	3/30/17	Contig	University of Florida College of Veterinary Medicine	SAMN02469629	GCA_000215485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/485/GCA_000215485.2_ASM21548v2	21596083	Florida
Lactobacillus plantarum	1590	PRJNA257680	257680	Terrabacteria group	Firmicutes	3.23765	44.7	chromosome:NZ_CP009236.1/CP009236.1	-	1	3148	2991	9/2/15	3/26/17	Complete Genome	Chinese National Human Genome Center at Shanghai	SAMN02953961	GCA_001278015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/015/GCA_001278015.1_ASM127801v1	-	2-May
Bacteroides fragilis CL07T00C01	997882	PRJNA64819	64819	FCB group	Bacteroidetes/Chlorobi group	5.42365	43.6	-	AGXM01	9	4882	4635	5/16/12	5/18/17	Scaffold	Broad Institute	SAMN02463925	GCA_000263115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/115/GCA_000263115.1_Bact_frag_CL07T00C01_V1	-	CL07T00C01
Nitrosomonas communis	44574	PRJNA282404	282404	Proteobacteria	Betaproteobacteria	4.06784	44.7	chromosome:NZ_CP011451.1/CP011451.1	-	1	3727	3375	5/15/15	4/10/17	Complete Genome	University of Alberta	SAMN03569272	GCA_001007935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/935/GCA_001007935.1_ASM100793v1	26769932	Nm2
Vibrio alginolyticus NBRC 15630 = ATCC 17749	1219076	PRJNA184046	184046	Proteobacteria	Gammaproteobacteria	5.14664	44.7	chromosome 1:NC_022349.1/CP006718.1; chromosome 2:NC_022359.1/CP006719.1	-	2	4753	4521	9/10/13	4/2/17	Complete Genome	Jinan Military General Hospital	SAMN02603463	GCA_000354175.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/175/GCA_000354175.2_ASM35417v2	25635021	ATCC 17749
Alteromonas macleodii ATCC 27126	529120	PRJNA29793	29793	Proteobacteria	Gammaproteobacteria	4.65385	44.7	chromosome:NC_018632.1/CP003841.1	-	1	3966	3799	9/21/12	5/18/17	Complete Genome	"Evolucinary Genomics Group, Universidad Miguel Hernandez"	SAMN02603229	GCA_000172635.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/635/GCA_000172635.2_ASM17263v2	"1,867,039,723,209,240"	ATCC 27126
Mycoplasma hyopneumoniae	2099	PRJNA378902	378902	Terrabacteria group	Tenericutes	0.909064	28.7	-	NBBN01	57	752	602	6/30/17	7/3/17	Scaffold	Huazhong Agriculture University	SAMN06347105	GCA_002213485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/485/GCA_002213485.1_ASM221348v1	-	TB1
Xanthomonas axonopodis pv. vasculorum	325777	PRJNA252656	252656	Proteobacteria	Gammaproteobacteria	4.80044	64	-	JPHD02	52	4106	3545	7/11/14	10/14/14	Scaffold	University of Exeter	SAMN02854335	GCA_000724905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/905/GCA_000724905.2_ASM72490v2	25263632	NCPPB 900
Methylophaga nitratireducenticrescens	754476	PRJNA84457	84457	Proteobacteria	Gammaproteobacteria	3.1371	44.7	chromosome:NC_017857.3/CP003390.3	-	1	3018	2923	5/3/12	7/22/17	Complete Genome	INRS-Institut Armand-Frappier	SAMN02603342	GCA_000260985.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/985/GCA_000260985.3_ASM26098v3	"2,281,544,523,148,100"	JAM1
Bacteroides helcogenes P 36-108	693979	PRJNA41913	41913	FCB group	Bacteroidetes/Chlorobi group	3.99891	44.7	chromosome:NC_014933.1/CP002352.1	-	1	3376	3187	1/18/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00138952	GCA_000186225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/225/GCA_000186225.1_ASM18622v1	21475586	P 36-108
Shewanella violacea DSS12	637905	PRJDA34739	34739	Proteobacteria	Gammaproteobacteria	4.9621	44.7	chromosome:NC_014012.1/AP011177.1	-	1	4172	3908	4/2/10	4/17/17	Complete Genome	Nara Institute of Science and Technology	SAMD00060963	GCA_000091325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/091/325/GCA_000091325.1_ASM9132v1	-	DSS12
Lactobacillus plantarum JDM1	644042	PRJNA32969	32969	Terrabacteria group	Firmicutes	3.19776	44.7	chromosome:NC_012984.1/CP001617.1	-	1	3084	2904	7/17/09	3/22/17	Complete Genome	Shanghai Jiao Tong University School of Medicine	SAMN02603864	GCA_000023085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/085/GCA_000023085.1_ASM2308v1	19465650	JDM1
Shewanella pealeana ATCC 700345	398579	PRJNA17415	17415	Proteobacteria	Gammaproteobacteria	5.17458	44.7	chromosome:NC_009901.1/CP000851.1	-	1	4531	4281	10/4/07	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598386	GCA_000018285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/285/GCA_000018285.1_ASM1828v1	-	ATCC 700345
Pyrococcus abyssi GE5	272844	PRJNA179	179	Euryarchaeota	Thermococci	1.76856	44.6975	chromosome:NC_000868.1/AL096836.1; plasmid pGT5:NC_001773.1/U49503.1	-	2	1969	1862	6/21/01	4/17/17	Complete Genome	Genoscope	SAMEA3283067	GCA_000195935.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/935/GCA_000195935.2_ASM19593v2	"107,362,251,138,102,000,000,000"	Orsay
Alteromonas mediterranea DE1	1004786	PRJNA65403	65403	Proteobacteria	Gammaproteobacteria	4.94713	44.6854	chromosome:NC_019393.1/CP003917.1; plasmid pAMDE1-300:NC_019394.1/CP003918.1	-	2	4389	4199	11/6/12	9/10/17	Complete Genome	University Miguel Hernandez	SAMN02604119	GCA_000310085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/085/GCA_000310085.1_ASM31008v1	-	AltDE1
Alteromonas mediterranea UM7	1300258	PRJNA192231	192231	Proteobacteria	Gammaproteobacteria	4.93166	44.6848	chromosome:NC_021713.1/CP004853.1; plasmid unnamed:NC_021718.1/CP004854.1	-	2	4376	4184	7/8/13	9/10/17	Complete Genome	University Miguel Hernandez	SAMN02604126	GCA_000439575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/575/GCA_000439575.1_ASM43957v1	23729633	UM7
Lactobacillus plantarum DOMLa	1300221	PRJNA191579	191579	Terrabacteria group	Firmicutes	3.21011	44.6748	chromosome:NZ_CP004406.1/CP004406.1; plasmid plasmid100:NZ_CP004407.1/CP004407.1; plasmid plasmid200:NZ_CP004408.1/CP004408.1	-	3	3103	2924	3/28/14	4/10/17	Complete Genome	"State Key Laboratory for Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, China CDC"	SAMN05771125	GCA_000604105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/105/GCA_000604105.1_ASM60410v1	-	DOMLa
Vibrio alginolyticus	663	PRJNA326213	326213	Proteobacteria	Gammaproteobacteria	5.40609	44.6654	chromosome 1:NZ_CP016224.1/CP016224.1; chromosome 2:NZ_CP016225.1/CP016225.1	-	2	4968	4712	7/5/16	4/10/17	Complete Genome	" South China Sea Institute of Oceanology, Chinese Academy of Sciences"	SAMN05271497	GCA_001679745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/745/GCA_001679745.1_ASM167974v1	-	ZJ-T
Agrobacterium tumefaciens str. Kerr 14	1183424	PRJEB12188	379246	Proteobacteria	Alphaproteobacteria	5.93041	59.3	-	FBWC01	5	5654	5378	3/16/17	4/3/17	Scaffold	Genoscope CEA	SAMEA3722811	GCA_900011755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/755/GCA_900011755.1_AHY_PRJEB12188_v1	-	Kerr 14
Bacillus clausii	79880	PRJNA242453	242453	Terrabacteria group	Firmicutes	4.29634	44.6648	chromosome:NZ_CP012475.1/CP012475.1; plasmid unnamed:NZ_CP012476.1/CP012476.1	-	2	4282	4114	8/24/15	4/11/17	Complete Genome	IMTECH-CSIR	SAMN02719561	GCA_000737305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/305/GCA_000737305.2_ASM73730v2	-	ENTPro
Alteromonas mediterranea	314275	PRJNA352689	352689	Proteobacteria	Gammaproteobacteria	4.92795	44.655	chromosome:NZ_CP018024.1/CP018024.1; plasmid pAMCP48-600:NZ_CP018025.1/CP018025.1	-	2	4321	4195	11/28/16	4/5/17	Complete Genome	University Miguel Hernandez	SAMN05991972	GCA_001886395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/395/GCA_001886395.1_ASM188639v1	-	CP48
Alteromonas mediterranea	314275	PRJNA352689	352689	Proteobacteria	Gammaproteobacteria	4.97138	44.6545	chromosome:NZ_CP018027.1/CP018027.1; plasmid MCP49-600:NZ_CP018028.1/CP018028.1	-	2	4381	4249	11/28/16	4/6/17	Complete Genome	University Miguel Hernandez	SAMN05991973	GCA_001886415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/415/GCA_001886415.1_ASM188641v1	-	CP49
Lactobacillus plantarum	1590	PRJNA361197	361197	Terrabacteria group	Firmicutes	2.91091	44.6534	chromosome:CP019348.1; plasmid unnamed1:CP019349.1; plasmid unnamed2:CP019350.1; plasmid unnamed3:CP019351.1	-	4	2918	2691	3/15/17	3/15/17	Complete Genome	Northeast Agriculture University	SAMN06227005	GCA_002028365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/365/GCA_002028365.1_ASM202836v1	-	KLDS1.0391
Alteromonas macleodii str. 'Balearic Sea AD45'	1004787	PRJNA65405	65405	Proteobacteria	Gammaproteobacteria	4.67488	44.6495	chromosome:NC_018679.1/CP003873.1; plasmid pAMBAS45:NC_018680.1/CP003874.1	-	2	4070	3926	9/28/12	5/18/17	Complete Genome	University Miguel Hernandez	SAMN02604120	GCA_000300175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/175/GCA_000300175.1_ASM30017v1	-	Balearic Sea AD45
Actinobacillus pleuropneumoniae serovar 6 str. Femo	754256	PRJNA47297	47297	Proteobacteria	Gammaproteobacteria	2.31096	41	-	ADOG01	52	2249	2150	9/13/10	3/30/17	Contig	Huazhong Agricultural University	SAMN02469617	GCA_000178555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/555/GCA_000178555.1_ASM17855v1	20802045	Femo
Alteromonas macleodii	28108	PRJNA288688	288688	Proteobacteria	Gammaproteobacteria	4.80181	44.6256	chromosome:NZ_CP012202.1/CP012202.1; plasmid pAM1A3:NZ_CP012203.1/CP012203.1	-	2	4195	3986	3/2/16	4/5/17	Complete Genome	University of Haifa	SAMN03835502	GCA_001578515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/515/GCA_001578515.1_ASM157851v1	27014193	HOT1A3
Vibrio scophthalmi	45658	PRJNA325204	325204	Proteobacteria	Gammaproteobacteria	4.92608	44.6162	chromosome 1:NZ_CP016307.1/CP016307.1; chromosome 2:NZ_CP016308.1/CP016308.1; plasmid pVS127:NZ_CP016309.1/CP016309.1; plasmid pVS14:NZ_CP016311.1/CP016311.1; plasmid pVS53:NZ_CP016310.1/CP016310.1	-	5	4543	4218	7/15/16	4/13/17	Complete Genome	National Institute of Fisheries Science	SAMN05225364	GCA_001685465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/465/GCA_001685465.1_ASM168546v1	-	VS-12
Sporosarcina sp. P37	1930546	PRJNA317682	317682	Terrabacteria group	Firmicutes	3.336	44.6111	chromosome:NZ_CP015349.1/CP015349.1; plasmid pSporoP37:NZ_CP018869.1/CP018869.1	-	2	3345	3214	4/25/17	4/27/17	Complete Genome	California State University Northridge	SAMN04623210	GCA_002109365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/365/GCA_002109365.1_ASM210936v1	-	P37
Vibrio alginolyticus	663	PRJNA345293	345293	Proteobacteria	Gammaproteobacteria	5.36283	44.6061	chromosome I:NZ_CP017918.1/CP017918.1; chromosome II:NZ_CP017919.1/CP017919.1	-	2	5048	4752	5/9/17	5/24/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05860644	GCA_002149065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/149/065/GCA_002149065.1_ASM214906v1	-	K09K1
Vibrio alginolyticus	663	PRJNA344731	344731	Proteobacteria	Gammaproteobacteria	5.35205	44.6056	chromosome 1:NZ_CP017889.1/CP017889.1; chromosome 2:NZ_CP017890.1/CP017890.1	-	2	5000	4726	5/9/17	5/22/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05860636	GCA_002119505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/505/GCA_002119505.1_ASM211950v1	-	K01M1
Vibrio alginolyticus	663	PRJNA345294	345294	Proteobacteria	Gammaproteobacteria	5.38918	44.6055	chromosome 1:NZ_CP017911.1/CP017911.1; chromosome 2:NZ_CP017912.1/CP017912.1	-	2	5037	4756	5/9/17	5/22/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05860645	GCA_002119585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/585/GCA_002119585.1_ASM211958v1	-	K10K4
Alteromonas mediterranea	314275	PRJNA307085	307085	Proteobacteria	Gammaproteobacteria	4.91057	44.6034	chromosome:CP013930.1; plasmid pAMED10_300:CP013931.1	-	2	4309	4164	2/17/16	2/17/16	Complete Genome	University Miguel Hernandez	SAMN04390199	GCA_001562295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/295/GCA_001562295.1_ASM156229v1	-	U10
Lactobacillus plantarum subsp. plantarum	337330	PRJNA388025	388025	Terrabacteria group	Firmicutes	3.2236	44.6	chromosome:NZ_CP021528.1/CP021528.1	-	1	3097	2947	6/6/17	6/8/17	Complete Genome	Microbial Institute for Fermentation Industry	SAMN07167784	GCA_002174195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/195/GCA_002174195.1_ASM217419v1	-	-
Prochlorococcus marinus str. MIT 9211	93059	PRJNA13551	13551	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.68896	38	chromosome:NC_009976.1/CP000878.1	-	1	1863	1796	11/13/07	5/28/17	Chromosome	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN00622972	GCA_000018585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/585/GCA_000018585.1_ASM1858v1	18159947	MIT9211
Tropheryma whipplei str. Dig7	1294028	PRJEB1445	189642	Terrabacteria group	Actinobacteria	0.927564	46.3	-	CAUP02	1	867	775	3/26/13	4/2/17	Scaffold	URMITE	SAMEA2272265	GCA_000359205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/205/GCA_000359205.2_G161	-	Dig7
Pyrococcus kukulkanii	1609559	PRJNA274214	274214	Euryarchaeota	Thermococci	1.97713	44.6	chromosome:NZ_CP010835.1/CP010835.1	-	1	2205	2064	2/29/16	4/12/17	Complete Genome	Ecole Normale Superieure de Lyon	SAMN03323778	GCA_001577775.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/775/GCA_001577775.1_ASM157777v1	27189596	NCB100
Thermococcus sp. 2319x1	1674923	PRJNA287751	287751	Euryarchaeota	Thermococci	1.96122	44.6	chromosome:NZ_CP012200.1/CP012200.1	-	1	2190	2017	1/4/16	4/11/17	Complete Genome	Hotzyme	SAMN03892931	GCA_001484685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/685/GCA_001484685.1_ASM148468v1	27199905	2319x1
Treponema sp. OMZ 838	1539298	PRJNA257944	257944	Spirochaetes	Spirochaetia	2.70807	44.6	chromosome:NZ_CP009227.1/CP009227.1	-	1	2490	2343	11/13/14	4/9/17	Complete Genome	The University of Hong Kong	SAMN02980916	GCA_000775995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/995/GCA_000775995.1_ASM77599v1	25540346	OMZ 838
Xanthomonas campestris pv. campestris	340	PRJNA282840	282840	Proteobacteria	Gammaproteobacteria	4.99443	65.1	chromosome:NZ_CP011946.1/CP011946.1	-	1	4398	4086	9/18/15	4/10/17	Chromosome	National Tsing Hua University	SAMN03580360	GCA_001293445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/445/GCA_001293445.1_ASM129344v1	26679582	17
Dehalobacter restrictus DSM 9455	871738	PRJNA66209	66209	Terrabacteria group	Firmicutes	2.94334	44.6	chromosome:NZ_CP007033.1/CP007033.1	-	1	2848	2647	1/3/14	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02769648	GCA_000512895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/895/GCA_000512895.1_ASM51289v1	24501624	PER-K23; DSM 9455
Methanolobus psychrophilus R15	1094980	PRJNA74005	74005	Euryarchaeota	Methanomicrobia	3.07277	44.6	chromosome:NC_018876.1/CP003083.1	-	1	2974	2841	10/18/12	4/17/17	Complete Genome	Beijing Institute of Genomics	SAMN00739943	GCA_000306725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/725/GCA_000306725.1_ASM30672v1	23760934	R15
Dehalobacter sp. DCA	1147129	PRJNA83115	83115	Terrabacteria group	Firmicutes	3.06995	44.6	chromosome:NC_018866.1/CP003869.1	-	1	2974	2848	10/16/12	4/8/17	Complete Genome	University of Toronto	SAMN02604247	GCA_000305775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/775/GCA_000305775.1_ASM30577v1	23284863	DCA
Alteromonas macleodii str. 'Black Sea 11'	1004785	PRJNA65401	65401	Proteobacteria	Gammaproteobacteria	4.48051	44.6	chromosome:NC_018692.1/CP003845.1	-	1	3871	3724	9/28/12	5/18/17	Complete Genome	University Miguel Hernandez	SAMN02604118	GCA_000299995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/995/GCA_000299995.1_ASM29999v1	-	Black Sea 11
Shewanella halifaxensis HAW-EB4	458817	PRJNA20241	20241	Proteobacteria	Gammaproteobacteria	5.22692	44.6	chromosome:NC_010334.1/CP000931.1	-	1	4544	4309	2/7/08	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598431	GCA_000019185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/185/GCA_000019185.1_ASM1918v1	-	HAW-EB4
Shewanella sp. W3-18-1	351745	PRJNA13902	13902	Proteobacteria	Gammaproteobacteria	4.70838	44.6	chromosome:NC_008750.1/CP000503.1	-	1	4303	4094	1/3/07	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02598315	GCA_000015185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/185/GCA_000015185.1_ASM1518v1	-	W3-18-1
Pseudoalteromonas atlantica T6c	342610	PRJNA13454	13454	Proteobacteria	Gammaproteobacteria	5.18701	44.6	chromosome:NC_008228.1/CP000388.1	-	1	4464	4319	6/28/06	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02598305	GCA_000014225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/225/GCA_000014225.1_ASM1422v1	-	T6c
Alteromonas mediterranea	314275	PRJNA307085	307085	Proteobacteria	Gammaproteobacteria	4.8852	44.5998	chromosome:NZ_CP013928.1/CP013928.1; plasmid pAMEDUM8_300:NZ_CP013929.1/CP013929.1	-	2	4308	4128	2/17/16	7/11/17	Complete Genome	University Miguel Hernandez	SAMN04390198	GCA_001562315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/315/GCA_001562315.1_ASM156231v1	-	UM8
Lactobacillus plantarum	1590	PRJNA390680	390680	Terrabacteria group	Firmicutes	3.20057	44.5914	chromosome:NZ_CP021997.1/CP021997.1; plasmid pPLP-1:NZ_CP021998.2/CP021998.2	-	2	3106	2917	6/22/17	7/22/17	Complete Genome	China Agricultural University	SAMN07248584	GCA_002205775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/775/GCA_002205775.2_ASM220577v2	-	LPL-1
Paenibacillus polymyxa SC2	886882	PRJNA52019	52019	Terrabacteria group	Firmicutes	6.23851	44.5786	chromosome:NC_014622.2/CP002213.2; plasmid pSC2:NC_014628.2/CP002214.2	-	2	5840	5495	10/19/10	4/3/17	Complete Genome	Shandong Agricultural University	SAMN02603854	GCA_000164985.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/985/GCA_000164985.2_ASM16498v2	21037012	SC2
Lactobacillus plantarum	1590	PRJNA379754	379754	Terrabacteria group	Firmicutes	3.19697	44.5727	chromosome:NZ_CP020861.1/CP020861.1; plasmid unnamed:NZ_CP020862.1/CP020862.1	-	2	3126	2866	4/25/17	4/27/17	Complete Genome	Chonbuk National University	SAMN06619691	GCA_002109405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/405/GCA_002109405.1_ASM210940v1	-	JBE490
Sulfuricurvum kujiense DSM 16994	709032	PRJNA43399	43399	Proteobacteria	delta/epsilon subdivisions	2.81936	44.5704	chromosome:NC_014762.1/CP002355.1; plasmid pSULKU01:NC_014754.1/CP002356.1; plasmid pSULKU02:NC_014755.1/CP002357.1; plasmid pSULKU03:NC_014756.1/CP002358.1; plasmid pSULKU04:NC_014763.1/CP002359.1	-	5	2852	2772	12/2/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713566	GCA_000183725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/725/GCA_000183725.1_ASM18372v1	22675602	DSM 16994
Vibrio anguillarum	55601	PRJNA390882	390882	Proteobacteria	Gammaproteobacteria	4.25643	44.5624	chromosome 1:NZ_CP022103.1/CP022103.1; chromosome 2:NZ_CP022104.1/CP022104.1	-	2	3981	3733	6/30/17	9/18/17	Complete Genome	UiT The Arctic University of Norway	SAMN07257084	GCA_002212025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/025/GCA_002212025.1_ASM221202v1	-	CNEVA NB11008
Vibrio anguillarum	55601	PRJNA390753	390753	Proteobacteria	Gammaproteobacteria	4.18297	44.5598	chromosome 1:NZ_CP022099.1/CP022099.1; chromosome 2:NZ_CP022100.1/CP022100.1	-	2	3925	3677	6/30/17	9/18/17	Complete Genome	UiT The Arctic University of Norway	SAMN07249489	GCA_002212005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/005/GCA_002212005.1_ASM221200v1	-	S3 4/9
Lactobacillus plantarum subsp. plantarum P-8	767468	PRJNA49145	49145	Terrabacteria group	Firmicutes	3.24663	44.5541	chromosome:NC_021224.2/CP005942.2; plasmid LBPp1:NC_021233.2/CP005943.2; plasmid LBPp2:NC_021225.2/CP005944.2; plasmid LBPp3:NC_021226.2/CP005945.2; plasmid LBPp4:NC_021234.2/CP005946.2; plasmid LBPp5:NC_021227.2/CP005947.2; plasmid LBPp6:NC_021228.1/CP005948.1; plasmid LBPp7:NZ_CP010527.1/CP010527.1	-	8	3207	2939	5/14/13	3/25/17	Complete Genome	"The Key Laboratory of Dairy Biotechnology and Bioengineering, Education Ministry of P. R. China, Department of Food Science and Engineering, Inner Mongolia Agricultural University, China"	SAMN02603936	GCA_000392485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/485/GCA_000392485.2_ASM39248v2	25747834	plantarum
Staphylococcus epidermidis BCM-HMP0060	525374	PRJNA31545	31545	Terrabacteria group	Firmicutes	2.60602	32.2	-	ACHE01	46	2559	2433	3/17/09	3/22/17	Scaffold	Baylor College of Medicine	SAMN00001492	GCA_000159575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/575/GCA_000159575.1_ASM15957v1	-	BCM-HMP0060
Lactobacillus plantarum	1590	PRJNA343197	343197	Terrabacteria group	Firmicutes	3.24648	44.5488	chromosome:NZ_CP017374.1/CP017374.1; plasmid pL1708-1:NZ_CP017375.1/CP017375.1; plasmid pL1708-2:NZ_CP017376.1/CP017376.1; plasmid pL1708-3:NZ_CP017377.1/CP017377.1; plasmid pL1708-4:NZ_CP017378.1/CP017378.1	-	5	3143	2928	5/2/17	5/6/17	Complete Genome	Technische Universitaet Muenchen	SAMN05805046	GCA_002117285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/285/GCA_002117285.1_ASM211728v1	-	TMW 1.708
Lactobacillus plantarum	1590	PRJNA315197	315197	Terrabacteria group	Firmicutes	3.27462	44.5484	chromosome:NZ_CP015126.1/CP015126.1; plasmid pCAUH201:NZ_CP015127.1/CP015127.1; plasmid pCAUH202:NZ_CP015128.1/CP015128.1; plasmid pCAUH203:NZ_CP015129.1/CP015129.1	-	4	3179	2998	4/8/16	4/10/17	Complete Genome	China Agricultural University	SAMN04549363	GCA_001617525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/525/GCA_001617525.1_ASM161752v1	-	CAUH2
Xanthomonas campestris pv. campestris str. CN14	1281282	PRJNA185972	185972	Proteobacteria	Gammaproteobacteria	5.00477	65.0123	chromosome:NZ_CM001871.1/CM001871.1; plasmid unnamed-p1:NZ_CM001872.1/CM001872.1; plasmid unnamed-p2:NZ_CM001873.1/CM001873.1; plasmid unnamed-p3:NZ_CM001874.1/CM001874.1; plasmid unnamed-p4:NZ_CM001875.1/CM001875.1; plasmid unnamed-p5:NZ_CM001876.1/CM001876.1; plasmid unnamed-p6:NZ_CM001877.1/CM001877.1; plasmid unnamed-p7:NZ_CM001878.1/CM001878.1	AQOP01	18	4445	4127	5/28/13	4/1/17	Chromosome	CNRS	SAMN02469931	GCA_000401735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/735/GCA_000401735.1_20120413	-	CN14
Lactobacillus plantarum	1590	PRJNA369573	369573	Terrabacteria group	Firmicutes	3.23075	44.5448	chromosome:NZ_CP019722.1/CP019722.1; plasmid pUnnamed:NZ_CP019723.1/CP019723.1	-	2	3134	2954	3/10/17	3/13/17	Complete Genome	Korea University	SAMN06240352	GCA_002024845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/845/GCA_002024845.1_ASM202484v1	-	CLP0611
Vibrio anguillarum	55601	PRJNA390882	390882	Proteobacteria	Gammaproteobacteria	4.40787	44.5424	chromosome 1:NZ_CP023054.1/CP023054.1; chromosome 2:NZ_CP023055.1/CP023055.1; plasmid p15:NZ_CP023056.1/CP023056.1	-	3	4137	3782	9/5/17	9/9/17	Complete Genome	UiT The Arctic University of Norway	SAMN07569844	GCA_002287545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/545/GCA_002287545.1_ASM228754v1	-	VIB43
Vibrio anguillarum	55601	PRJNA390882	390882	Proteobacteria	Gammaproteobacteria	4.14191	44.5225	chromosome 1:NZ_CP023208.1/CP023208.1; chromosome 2:NZ_CP023209.1/CP023209.1; plasmid p65:NZ_CP023210.1/CP023210.1	-	3	3840	3597	9/12/17	9/14/17	Complete Genome	UiT The Arctic University of Norway	SAMN07602430	GCA_002291265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/265/GCA_002291265.1_ASM229126v1	-	ATCC-68554
Tropheryma whipplei str. Dig10	1294029	PRJEB1446	189643	Terrabacteria group	Actinobacteria	0.927515	46.4	-	CAUQ02	1	867	781	3/26/13	4/2/17	Scaffold	URMITE	SAMEA2272751	GCA_000359225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/225/GCA_000359225.2_G162	-	Dig10
Prochlorococcus marinus str. MIT 9107	59921	PRJNA246696	246696	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.69994	31	-	JNAI01	13	1895	1803	9/29/14	4/2/17	Contig	MIT	SAMN02769552	GCA_000759855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/855/GCA_000759855.1_ASM75985v1	25977791	MIT 9107
Lactobacillus plantarum subsp. plantarum ST-III	889932	PRJNA52949	52949	Terrabacteria group	Firmicutes	3.30794	44.5045	chromosome:NC_014554.1/CP002222.1; plasmid pST-III:NC_014558.2/CP002223.2	-	2	3194	3020	10/1/10	3/22/17	Complete Genome	"Technology Center of Bright Dairy & Food Co., Ltd"	SAMN02603896	GCA_000148815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/815/GCA_000148815.2_ASM14881v1	21037001	ST-III
Lactobacillus plantarum	1590	PRJNA323381	323381	Terrabacteria group	Firmicutes	3.26371	44.5024	chromosome:NZ_CP015966.1/CP015966.1; plasmid LZ206p1:NZ_CP015968.1/CP015968.1; plasmid LZ206p2:NZ_CP015967.1/CP015967.1; plasmid LZ206p3:NZ_CP015969.1/CP015969.1	-	4	3192	2887	6/8/16	3/28/17	Complete Genome	Zhejiang Gongshang University	SAMN05177792	GCA_001659745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/745/GCA_001659745.1_ASM165974v1	-	LZ206
Vibrio sp. Q67	2025808	PRJNA388537	388537	Proteobacteria	Gammaproteobacteria	4.01771	44.5011	chromosome 1:NZ_CP022741.1/CP022741.1; chromosome 2:NZ_CP022742.1/CP022742.1	-	2	3763	3428	8/16/17	8/17/17	Complete Genome	"South China Botanical Garden, Chinese Academy of Sciences"	SAMN07178513	GCA_002257545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/545/GCA_002257545.1_ASM225754v1	-	Q67
Lactobacillus plantarum	1590	PRJNA384998	384998	Terrabacteria group	Firmicutes	3.32568	44.5	chromosome:NZ_CP022373.1/CP022373.1	-	1	3253	3062	7/17/17	7/19/17	Complete Genome	Boston University	SAMN06855883	GCA_002220175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/175/GCA_002220175.1_ASM222017v1	-	dm
Lactobacillus plantarum	1590	PRJNA382868	382868	Terrabacteria group	Firmicutes	3.28462	44.5	chromosome:NZ_CP020816.1/CP020816.1	-	1	3185	3011	4/25/17	4/27/17	Complete Genome	Hubei University of Technology	SAMN06756312	GCA_002109425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/425/GCA_002109425.1_ASM210942v1	-	LP2
Sporosarcina sp. P33	1930764	PRJNA316714	316714	Terrabacteria group	Firmicutes	3.23544	44.5	chromosome:NZ_CP015027.1/CP015027.1	-	1	3164	3033	4/3/17	4/5/17	Complete Genome	California State University Northridge	SAMN04589807	GCA_002077155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/155/GCA_002077155.1_ASM207715v1	-	P33
Niabella ginsenosidivorans	1176587	PRJNA321784	321784	FCB group	Bacteroidetes/Chlorobi group	5.62773	44.5	chromosome:NZ_CP015772.1/CP015772.1	-	1	4778	4634	6/2/16	4/17/17	Complete Genome	Hankyong University	SAMN05003825	GCA_001654455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/654/455/GCA_001654455.1_ASM165445v1	-	BS26
Lactobacillus plantarum	1590	PRJNA313247	313247	Terrabacteria group	Firmicutes	3.26261	44.5	chromosome:NZ_CP014780.1/CP014780.1	-	1	3177	2993	3/22/16	3/28/17	Complete Genome	Chonbuk National University	SAMN04517536	GCA_001596095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/095/GCA_001596095.1_ASM159609v1	-	JBE245
Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261	754258	PRJNA47301	47301	Proteobacteria	Gammaproteobacteria	2.26339	41.2	-	ADOI01	65	2190	2062	9/13/10	3/30/17	Contig	Huazhong Agricultural University	SAMN02469620	GCA_000178575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/575/GCA_000178575.1_ASM17857v1	20802045	CVJ13261
Nitrosomonas ureae	44577	PRJNA304608	304608	Proteobacteria	Betaproteobacteria	3.30782	44.5	chromosome:NZ_CP013341.1/CP013341.1	-	1	3071	2892	12/2/15	4/11/17	Complete Genome	University of Alberta	SAMN04305135	GCA_001455205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/205/GCA_001455205.1_ASM145520v1	26966201	Nm10
Salinicoccus halodurans	407035	PRJNA282445	282445	Terrabacteria group	Firmicutes	2.77838	44.5	chromosome:NZ_CP011366.1/CP011366.1	-	1	2838	2709	5/11/15	4/10/17	Complete Genome	Institute of Microbiology Chinese Academy of Sciences	SAMN03570113	GCA_001005905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/905/GCA_001005905.1_ASM100590v1	26634017	H3B36
Lactobacillus plantarum	1590	PRJNA271910	271910	Terrabacteria group	Firmicutes	3.28426	44.5	chromosome:NZ_CP010528.1/CP010528.1	-	1	3170	3021	2/23/15	3/25/17	Complete Genome	RMIT University	SAMN03278695	GCA_000931425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/425/GCA_000931425.1_ASM93142v1	25838470	B21
Candidatus Methylopumilus turicensis	1581680	PRJEB7927	274466	Proteobacteria	Betaproteobacteria	1.75499	44.5	chromosome 1:NZ_LN794158.1/LN794158.1	-	1	1786	1706	2/4/15	4/10/17	Complete Genome	University of Zurich	SAMEA3165956	GCA_000953015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/015/GCA_000953015.1_Candidatus_Methylopumilus_turicensis_MMS-10A-171	-	MMS-10A-171
Candidatus Saccharibacteria oral taxon TM7x	1476577	PRJNA241438	241438	unclassified Bacteria	Bacteria candidate phyla	0.705138	44.5	chromosome:NZ_CP007496.1/CP007496.1	-	1	747	693	12/18/14	4/10/17	Complete Genome	J. Craig Venter Institute	SAMN02693873	GCA_000803625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/625/GCA_000803625.1_ASM80362v1	25535390	TM7x
Agrobacterium tumefaciens str. CFBP 5621	1183422	PRJEB12186	379244	Proteobacteria	Alphaproteobacteria	5.38374	59.4	-	FBWF01	3	5194	4978	3/16/17	4/3/17	Scaffold	Genoscope CEA	SAMEA3722809	GCA_900012605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/605/GCA_900012605.1_AHY_PRJEB12186_v1	-	CFBP 5621
Xenorhabdus poinarii G6	1354304	PRJEB4254	232760	Proteobacteria	Gammaproteobacteria	3.65952	44.5	chromosome:NZ_FO704551.1/FO704551.1	-	1	3420	3181	6/30/14	4/17/17	Complete Genome	Genoscope CEA	SAMEA3283114	GCA_000968175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/175/GCA_000968175.1_ASM96817v1	-	G6
Shewanella putrefaciens 200	399804	PRJNA13392	13392	Proteobacteria	Gammaproteobacteria	4.84025	44.5	chromosome:NC_017566.1/CP002457.1	-	1	4402	4201	1/18/11	7/25/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00632276	GCA_000169215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/215/GCA_000169215.2_ASM16921v2	-	200
Helicobacter felis ATCC 49179	936155	PRJEA61189	61189	Proteobacteria	delta/epsilon subdivisions	1.67268	44.5	chromosome:NC_014810.2/FQ670179.2	-	1	1696	1610	12/16/10	4/7/17	Complete Genome	Wellcome Trust Sanger Institute	SAMEA2272759	GCA_000200595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/200/595/GCA_000200595.1_ASM20059v1	21402865	ATCC 49179
Campylobacter curvus 525.92	360105	PRJNA17161	17161	Proteobacteria	delta/epsilon subdivisions	1.97127	44.5	chromosome:NC_009715.2/CP000767.2	-	1	2012	1910	7/25/07	4/13/17	Complete Genome	TIGR	SAMN02604055	GCA_000017465.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/465/GCA_000017465.2_ASM1746v2	-	525.92
Shewanella putrefaciens CN-32	319224	PRJNA13393	13393	Proteobacteria	Gammaproteobacteria	4.65922	44.5	chromosome:NC_009438.1/CP000681.1	-	1	4188	3981	4/20/07	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN00623063	GCA_000016585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/585/GCA_000016585.1_ASM1658v1	-	CN-32
Alteromonas mediterranea	314275	PRJNA352689	352689	Proteobacteria	Gammaproteobacteria	4.65221	44.4971	chromosome:NZ_CP018029.1/CP018029.1; plasmid MRG65-300:NZ_CP018030.1/CP018030.1	-	2	4118	3988	11/28/16	4/6/17	Complete Genome	University Miguel Hernandez	SAMN05991974	GCA_001886435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/435/GCA_001886435.1_ASM188643v1	-	RG65
Lactobacillus plantarum	1590	PRJNA289547	289547	Terrabacteria group	Firmicutes	3.32246	44.4873	chromosome:NZ_CP012122.1/CP012122.1; plasmid ZJ95p1:NZ_CP012123.1/CP012123.1; plasmid ZJ95p2:NZ_CP012124.1/CP012124.1	-	3	3232	3026	1/4/16	3/27/17	Complete Genome	ZHE JIANG GONG SHANG UNIVERSITY	SAMN03854682	GCA_001484005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/005/GCA_001484005.1_ASM148400v1	-	LZ95
Vibrio alginolyticus	663	PRJNA305220	305220	Proteobacteria	Gammaproteobacteria	5.72494	44.4838	chromosome I:NZ_CP013484.1/CP013484.1; chromosome II:NZ_CP013485.1/CP013485.1; plasmid pMBL128:NZ_CP013486.1/CP013486.1; plasmid pMBL287:NZ_CP013487.1/CP013487.1; plasmid pMBL96:NZ_CP013488.1/CP013488.1	-	5	5393	5094	12/9/15	4/4/17	Complete Genome	South China Sea Institute of Oceanology	SAMN04320555	GCA_001469735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/735/GCA_001469735.1_ASM146973v1	-	ATCC 33787
Vibrio anguillarum	55601	PRJNA390882	390882	Proteobacteria	Gammaproteobacteria	4.28699	44.4828	chromosome 1:NZ_CP022101.1/CP022101.1; chromosome 2:NZ_CP022102.1/CP022102.1	-	2	3949	3719	6/30/17	7/3/17	Complete Genome	UiT The Arctic University of Norway	SAMN07251967	GCA_002211985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/985/GCA_002211985.1_ASM221198v1	-	JLL237
Vibrio anguillarum 775	882102	PRJNA51883	51883	Proteobacteria	Gammaproteobacteria	4.05205	44.4781	chromosome I:NC_015633.1/CP002284.1; chromosome II:NC_015637.1/CP002285.1	-	2	3725	3426	6/9/11	4/10/17	Complete Genome	Oregon Health and Science University	SAMN02603689	GCA_000217675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/675/GCA_000217675.1_ASM21767v1	21576332	775
Xanthomonas axonopodis	53413	PRJNA238852	238852	Proteobacteria	Gammaproteobacteria	4.48036	64.5	-	JFAQ01	325	4084	3331	9/30/15	9/30/15	Contig	CSIR-Institute of Microbial Technology	SAMN02646552	GCA_001304695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/695/GCA_001304695.1_XAXN-20feb14	-	DSM 3585
Mycoplasma hyopneumoniae	2099	PRJNA378403	378403	Terrabacteria group	Tenericutes	0.898117	28.7	-	MWWN01	5	724	657	6/14/17	6/19/17	Scaffold	Wageningen University	SAMN06545933	GCA_002193015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/015/GCA_002193015.1_ASM219301v1	28600895	11
Vibrio anguillarum	55601	PRJNA390882	390882	Proteobacteria	Gammaproteobacteria	4.89769	44.4592	chromosome 1:NZ_CP023310.1/CP023310.1; chromosome 2:NZ_CP023311.1/CP023311.1; plasmid p292:NZ_CP023312.1/CP023312.1	-	3	4697	4127	9/18/17	9/20/17	Complete Genome	UiT The Arctic University of Norway	SAMN07622449	GCA_002310335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/335/GCA_002310335.1_ASM231033v1	-	VIB12
Lactobacillus plantarum WCFS1	220668	PRJNA356	356	Terrabacteria group	Firmicutes	3.34862	44.4501	chromosome:NC_004567.2/AL935263.2; plasmid pWCFS101:NC_006375.1/CR377164.1; plasmid pWCFS102:NC_006376.1/CR377165.1; plasmid pWCFS103:NC_006377.1/CR377166.1	-	4	3174	3063	2/7/03	8/28/16	Complete Genome	Wageningen Centre for Food Sciences	SAMEA3138345	GCA_000203855.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/203/855/GCA_000203855.3_ASM20385v3	"1,711,545,322,156,390"	WCFS1
Shigella sonnei	624	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.61828	59.4	-	JUSZ01	189	5378	5193	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03197997	GCA_001066285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/285/GCA_001066285.1_ASM106628v1	26230489	786_SSON
Bacteroides fragilis CL03T00C08	997878	PRJNA64811	64811	FCB group	Bacteroidetes/Chlorobi group	5.23879	43.5	-	AGXK01	8	4683	4434	6/25/12	5/18/17	Scaffold	Broad Institute	SAMN02463921	GCA_000273095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/095/GCA_000273095.1_Bact_frag_CL03T00C08_V1	-	CL03T00C08
Vibrio anguillarum M3	882944	PRJNA211964	211964	Proteobacteria	Gammaproteobacteria	4.11789	44.4479	chromosome 1:NC_022223.1/CP006699.1; chromosome 2:NC_022224.1/CP006700.1; plasmid unnamed:NC_022225.1/CP006701.1	-	3	3790	3507	8/30/13	9/19/17	Complete Genome	YSFRI	SAMN02604340	GCA_000462975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/975/GCA_000462975.1_ASM46297v1	24072867	M3
Anaplasma marginale str. Florida Relapse	1000935	PRJNA64633	64633	Proteobacteria	Alphaproteobacteria	1.15441	49.8	-	AFMT01	61	1002	900	5/31/11	3/30/17	Contig	University of Florida College of Veterinary Medicine	SAMN02469630	GCA_000215505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/505/GCA_000215505.2_ASM21550v2	21596083	Florida Relapse
Shigella dysenteriae WRSd5	1401259	PRJNA219330	219330	Proteobacteria	Gammaproteobacteria	4.16115	50.8	-	AXUU01	761	4509	3758	11/25/13	3/5/17	Scaffold	Igenbio Inc	SAMN03083603	GCA_000499085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/085/GCA_000499085.1_RRH_AFF	-	WRSd5
Shewanella baltica OS625	693972	PRJNA60225	60225	Proteobacteria	Gammaproteobacteria	5.19524	46.3	-	AGEX01	53	4542	4306	10/21/11	5/19/17	Contig	DOE Joint Genome Institute	SAMN02256537	GCA_000231345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/345/GCA_000231345.2_ASM23134v2	22328742	OS625
Ehrlichia ruminantium	779	PRJDB4736	320920	Proteobacteria	Alphaproteobacteria	1.46506	27.5	-	BDDM01	390	1049	819	5/3/16	4/5/17	Contig	Graduate School of Veterinary Medicine Hokkaido University	SAMD00050889	GCA_001686305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/305/GCA_001686305.1_ER_POK_1.0	27313287	Pokoase 417
Lactobacillus plantarum ZJ316	1284663	PRJNA186807	186807	Terrabacteria group	Firmicutes	3.29976	44.4457	chromosome:NC_020229.1/CP004082.1; plasmid pLP-ZJ101:NC_021903.1/CP006247.1; plasmid pLP-ZJ102:NC_021904.1/CP006248.1; plasmid pLP-ZJ103:NC_021912.1/CP006249.1	-	4	3209	2972	2/6/13	3/24/17	Complete Genome	Zhejiang Gongshang University	SAMN02604341	GCA_000338115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/338/115/GCA_000338115.2_ASM33811v2	23516215	ZJ316
Chroococcidiopsis thermalis PCC 7203	251229	PRJNA38119	38119	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.6894	44.4387	chromosome:NC_019695.1/CP003597.1; plasmid pCHRO.01:NC_019699.1/CP003598.1; plasmid pCHRO.02:NC_019696.1/CP003599.1	-	3	5950	5716	12/5/12	4/17/17	Complete Genome	JGI	SAMN02261359	GCA_000317125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/125/GCA_000317125.1_ASM31712v1	-	PCC 7203
Vibrio anguillarum	55601	PRJNA266919	266919	Proteobacteria	Gammaproteobacteria	4.34222	44.4319	chromosome I:NZ_CP011460.1/CP011460.1; chromosome II:NZ_CP011461.1/CP011461.1	-	2	3991	3741	6/9/16	4/5/17	Complete Genome	University of Copenhagen	SAMN03175439	GCA_001660505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/505/GCA_001660505.1_ASM166050v1	-	90-11-286
Lactobacillus plantarum subsp. plantarum	337330	PRJNA292463	292463	Terrabacteria group	Firmicutes	3.27324	44.4271	chromosome:NZ_CP016270.1/CP016270.1; plasmid pLp1:NZ_CP016271.1/CP016271.1; plasmid pLp2:NZ_CP016272.1/CP016272.1	-	3	3214	3000	7/5/17	9/6/17	Complete Genome	Acadamy of Military Medical Sciences	SAMN03976562	GCA_001272315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/315/GCA_001272315.2_ASM127231v2	-	CGMCC 1.557
Lactobacillus plantarum	1590	PRJNA352107	352107	Terrabacteria group	Firmicutes	3.39278	44.4243	chromosome:NZ_CP017954.1/CP017954.1; plasmid unnamed1:NZ_CP017955.1/CP017955.1; plasmid unnamed2:NZ_CP017956.1/CP017956.1; plasmid unnamed3:NZ_CP017957.1/CP017957.1; plasmid unnamed4:NZ_CP017958.1/CP017958.1; plasmid unnamed5:NZ_CP017959.1/CP017959.1; plasmid unnamed6:NZ_CP017960.1/CP017960.1	-	7	3351	3076	11/10/16	3/28/17	Complete Genome	Anhui University	SAMN05966974	GCA_001874125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/125/GCA_001874125.1_ASM187412v1	-	C410L1
Lactobacillus plantarum	1590	PRJNA322398	322398	Terrabacteria group	Firmicutes	3.35469	44.4	chromosome:NZ_CP016071.1/CP016071.1	-	1	3264	3066	6/20/16	3/28/17	Complete Genome	Nanchang University	SAMN05162259	GCA_001672035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/035/GCA_001672035.1_ASM167203v1	-	NCU116
Thermus thermophilus	274	PRJNA348753	348753	Terrabacteria group	Deinococcus-Thermus	2.03561	67.9	-	DFSU01	162	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451488	GCA_002379325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/325/GCA_002379325.1_ASM237932v1	28894102	-
Aggregatibacter actinomycetemcomitans	714	PRJNA288376	288376	Proteobacteria	Gammaproteobacteria	2.12909	44.4	chromosome:NZ_CP012958.1/CP012958.1	-	1	2136	1946	3/21/16	4/5/17	Complete Genome	The University of Texas at Austin	SAMN03799080	GCA_001594245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/245/GCA_001594245.1_ASM159424v1	-	VT1169
Alteromonas macleodii	28108	PRJNA307085	307085	Proteobacteria	Gammaproteobacteria	4.57562	44.4	chromosome:NZ_CP014323.1/CP014323.1	-	1	4086	3822	2/17/16	4/5/17	Complete Genome	University Miguel Hernandez	SAMN04372246	GCA_001562235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/235/GCA_001562235.1_ASM156223v1	-	D7
Aggregatibacter actinomycetemcomitans HK1651	272556	PRJNA239703	239703	Proteobacteria	Gammaproteobacteria	2.1055	44.4	chromosome:NZ_CP007502.1/CP007502.1	-	1	2110	1888	3/28/14	4/18/17	Complete Genome	Oklahoma University Health Sciences Center	SAMN02673418	GCA_000604045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/045/GCA_000604045.1_ASM60404v1	-	HK1651
Corynebacterium jeikeium	38289	PRJNA238244	238244	Terrabacteria group	Actinobacteria	2.26986	61.9	-	JFCJ01	80	2012	1897	8/6/14	4/2/17	Contig	University of Washington	SAMN02641053	GCA_000738255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/255/GCA_000738255.1_Cj21382	25116839	Cj21382
Ehrlichia chaffeensis str. Sapulpa	332415	PRJNA13916	13916	Proteobacteria	Alphaproteobacteria	1.00581	30	-	AAIF01	125	858	663	6/20/05	3/30/17	Contig	DOE Joint Genome Institute	SAMN02441793	GCA_000167655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/655/GCA_000167655.1_ASM16765v1	-	Sapulpa
Candidatus Pelagibacter ubique HIMB083	1096769	PRJNA74601	74601	Proteobacteria	Alphaproteobacteria	1.396	29.1	-	AZAL01	1	1490	1446	12/5/13	4/2/17	Contig	JGI	SAMN02597166	GCA_000504225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/225/GCA_000504225.1_ASM50422v1	-	HIMB083
Aggregatibacter actinomycetemcomitans ANH9381	754507	PRJNA47337	47337	Proteobacteria	Gammaproteobacteria	2.13681	44.4	chromosome:CP003099.1	-	1	2142	2058	12/23/11	1/30/14	Complete Genome	"Bumgarner laboratory, Department of Microbiology, University of Washington"	SAMN02603044	GCA_000241025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/025/GCA_000241025.2_ASM24102v2	-	ANH9381
Dichelobacter nodosus VCS1703A	246195	PRJNA50	50	Proteobacteria	Gammaproteobacteria	1.38935	44.4	chromosome:NC_009446.1/CP000513.1	-	1	1348	1277	5/4/07	4/6/17	Complete Genome	TIGR	SAMN02603972	GCA_000015345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/345/GCA_000015345.1_ASM1534v1	17468768	VCS1703A
Shigella boydii 08-0280	1212573	PRJNA171080	171080	Proteobacteria	Gammaproteobacteria	4.83556	51	-	AMKA01	124	5471	4319	1/6/15	8/4/17	Contig	Institute for Genome Sciences	SAMN03276466	GCA_000815705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/705/GCA_000815705.1_ASM81570v1	-	08-0280
Lactobacillus plantarum	1590	PRJNA386760	386760	Terrabacteria group	Firmicutes	3.33136	44.3988	chromosome:NZ_CP021501.1/CP021501.1; plasmid pPL2022-1:NZ_CP021502.1/CP021502.1; plasmid pPL2022-2:NZ_CP021503.1/CP021503.1; plasmid pPL2022-3:NZ_CP021504.1/CP021504.1	-	4	3261	3068	6/6/17	6/8/17	Complete Genome	Microbial Institiue for Fermentation Industry	SAMN07125944	GCA_002173655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/655/GCA_002173655.1_ASM217365v1	-	SRCM102022
Lactobacillus plantarum	1590	PRJNA340346	340346	Terrabacteria group	Firmicutes	3.32995	44.393	chromosome:NZ_CP017066.1/CP017066.1; plasmid pLB301:NZ_CP017067.1/CP017067.1; plasmid pLB302:NZ_CP017068.1/CP017068.1	-	3	3232	3060	9/5/17	9/7/17	Complete Genome	Korea Food Research Institute	SAMN05631073	GCA_002286275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/275/GCA_002286275.1_ASM228627v1	-	LP3
Rhodobacter sphaeroides 2.4.1	272943	PRJNA40077	40077	Proteobacteria	Alphaproteobacteria	4.62817	68.7651	chromosome 1:NZ_AKVW01000001.1/AKVW01000001.1; chromosome 2:NZ_AKVW01000002.1/AKVW01000002.1; plasmid Ax:NZ_AKVW01000003.1/AKVW01000003.1; plasmid B:NZ_AKVW01000004.1/AKVW01000004.1; plasmid C:NZ_AKVW01000005.1/AKVW01000005.1; plasmid D:NZ_AKVW01000006.1/AKVW01000006.1; plasmid Dx:NZ_AKVW01000007.1/AKVW01000007.1	AKVW01	7	4538	4402	6/25/12	5/19/17	Chromosome	Broad Institute	SAMN02597082	GCA_000273405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/405/GCA_000273405.1_Rhod_Spha_2_4_1_V1	22829535	2.4.1
Vibrio anguillarum	55601	PRJEB5701	251627	Proteobacteria	Gammaproteobacteria	4.37383	44.3693	chromosome I:NZ_LK021130.1/LK021130.1; chromosome II:NZ_LK021129.1/LK021129.1; plasmid III:NZ_LK021128.1/LK021128.1	-	3	4051	3794	6/2/14	4/2/17	Complete Genome	UiT: The Arctic University of Norway	SAMEA3865288	GCA_000786425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/425/GCA_000786425.1_Vibrio_anguillarum_NB10_serovar_O1	26380645	NB10
Lactobacillus plantarum	1590	PRJNA343197	343197	Terrabacteria group	Firmicutes	3.33288	44.3665	chromosome:NZ_CP017379.1/CP017379.1; plasmid pL11623-1:NZ_CP017380.1/CP017380.1; plasmid pL11623-2:NZ_CP017381.1/CP017381.1; plasmid pL11623-3:NZ_CP017382.1/CP017382.1; plasmid pL11623-4:NZ_CP017383.1/CP017383.1	-	5	3267	3055	5/2/17	5/6/17	Complete Genome	Technische Universitaet Muenchen	SAMN05805047	GCA_002117305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/305/GCA_002117305.1_ASM211730v1	-	TMW 1.1623
Lactobacillus plantarum	1590	PRJNA322423	322423	Terrabacteria group	Firmicutes	3.42529	44.3437	chromosome:NZ_CP015857.1/CP015857.1; plasmid LZ227p1:NZ_CP015858.1/CP015858.1; plasmid LZ227p2:NZ_CP015860.1/CP015860.1; plasmid LZ227p3:NZ_CP015861.1/CP015861.1; plasmid LZ227p4:NZ_CP015859.1/CP015859.1; plasmid LZ227p5:NZ_CP015862.1/CP015862.1	-	6	3393	3082	6/8/16	3/28/17	Complete Genome	Zhejiang Gongshang University	SAMN05162523	GCA_001660025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/025/GCA_001660025.1_ASM166002v1	-	LZ227
Lactobacillus plantarum	1590	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.46299	44.3435	chromosome:NZ_CP017406.1/CP017406.1; plasmid pRI113_1:NZ_CP017407.1/CP017407.1; plasmid pRI113_2:NZ_CP017408.1/CP017408.1; plasmid pRI113_3:NZ_CP017409.1/CP017409.1; plasmid pRI113_4:NZ_CP017410.1/CP017410.1; plasmid pRI113_5:NZ_CP017411.1/CP017411.1; plasmid pRI113_6:NZ_CP017412.1/CP017412.1	-	7	3423	3183	2/7/17	3/29/17	Complete Genome	ETH Zurich	SAMN05717715	GCA_001990145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/145/GCA_001990145.1_ASM199014v1	-	RI-113
Leptospira borgpetersenii str. 4E	1141102	PRJNA82339	82339	Spirochaetes	Spirochaetia	3.9126	40.2	chromosome 1:NZ_CP015814.2/CP015814.2; chromosome 2:NZ_CP015815.2/CP015815.2	-	2	3803	3367	5/26/16	4/6/17	Chromosome	Centro de Desenvolvimento Tecnológico (CDTec)	SAMN04868324	GCA_001652525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/525/GCA_001652525.2_ASM165252v2	-	4E
Mycoplasma capricolum subsp. capricolum 14232	1188238	PRJNA164757	164757	Terrabacteria group	Tenericutes	1.03223	23.6	-	JFDO01	49	890	804	7/21/14	4/2/17	Contig	EVOLMYCO	SAMN02927604	GCA_000731875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/875/GCA_000731875.1_ASM73187v1	-	14232
Bartonella bacilliformis Cond044	1293906	PRJNA189515	189515	Proteobacteria	Alphaproteobacteria	1.43915	38.3	-	ASIU01	3	1281	1178	6/17/14	4/3/17	Scaffold	Broad Institute	SAMN01921139	GCA_000709775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/775/GCA_000709775.1_Bart_baci_Cond044_V1	-	Cond044
Vibrio anguillarum	55601	PRJNA390489	390489	Proteobacteria	Gammaproteobacteria	4.33812	44.3381	chromosome 1:NZ_CP021980.1/CP021980.1; chromosome 2:NZ_CP021981.1/CP021981.1	-	2	4057	3786	6/30/17	9/18/17	Complete Genome	UiT The Arctic University of Norway	SAMN07236662	GCA_002211505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/505/GCA_002211505.1_ASM221150v1	-	87-9-116
Lactobacillus plantarum	1590	PRJNA295007	295007	Terrabacteria group	Firmicutes	3.40571	44.3323	chromosome:NZ_CP012650.1/CP012650.1; plasmid pMK01:NZ_CP012657.1/CP012657.1; plasmid pMK02:NZ_CP012655.1/CP012655.1; plasmid pMK03:NZ_CP012651.1/CP012651.1; plasmid pMK04:NZ_CP012652.1/CP012652.1; plasmid pMK05:NZ_CP012659.1/CP012659.1; plasmid pMK06:NZ_CP012660.1/CP012660.1; plasmid pMK07:NZ_CP012653.1/CP012653.1; plasmid pMK08:NZ_CP012656.1/CP012656.1; plasmid pMK09:NZ_CP012658.1/CP012658.1; plasmid pMK10:NZ_CP012654.1/CP012654.1	-	11	3433	3065	9/29/15	3/26/17	Complete Genome	CSIR-Institute of Himalayan Bioresource Technology	SAMN04038608	GCA_001302645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/645/GCA_001302645.1_ASM130264v1	26586884	HFC8
Aggregatibacter actinomycetemcomitans D11S-1	668336	PRJNA40107	40107	Proteobacteria	Gammaproteobacteria	2.20469	44.3298	chromosome:CP001733.2;  phage_S1249:NC_013597.1/GQ866233.1; plasmid S25:GQ866234.1; plasmid S57:GQ866235.1	-	4	2165	2041	10/16/09	2/4/14	Complete Genome	University of Southern California School of Dentistry	SAMN02604243	GCA_000146265.4	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/146/265/GCA_000146265.4_ASM14626v4	19820097	D11S-1
Oenococcus oeni AWRIB548	1206772	PRJNA169941	169941	Terrabacteria group	Firmicutes	1.83538	38	-	ALAH01	29	1895	1707	8/9/12	3/23/17	Contig	The Australian Wine Research Institute	SAMN02471127	GCA_000286195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/195/GCA_000286195.1_AWRIB548_v1	22863143	AWRIB548
Streptococcus mitis SK597	585204	PRJNA33357	33357	Terrabacteria group	Firmicutes	2.0292	39.5	-	AEDV01	108	2061	1896	9/24/10	3/30/17	Contig	University of Maryland Institute for Genome Sciences	SAMN00001435	GCA_000148545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/545/GCA_000148545.2_ASM14854v1	-	SK597
Aeromonas salmonicida subsp. salmonicida	29491	PRJNA264317	264317	Proteobacteria	Gammaproteobacteria	4.88951	58.2	-	JYFF01	123	4707	4214	12/15/15	4/5/17	Scaffold	Universite Laval	SAMN03332961	GCA_001499805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/805/GCA_001499805.2_ASM149980v2	26753691	RS534
Salinispora tropica CNY012	1169197	PRJNA195721	195721	Terrabacteria group	Actinobacteria	5.36973	69.4	-	JHVV01	154	5051	4660	4/8/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02953001	GCA_000620325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/325/GCA_000620325.1_ASM62032v1	-	CNY012
Vibrio alginolyticus	663	PRJNA345277	345277	Proteobacteria	Gammaproteobacteria	5.67409	44.326	chromosome 1:NZ_CP017896.1/CP017896.1; chromosome II:NZ_CP017897.1/CP017897.1; plasmid pL294:NZ_CP017898.1/CP017898.1	-	3	5360	5069	5/9/17	5/24/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05860638	GCA_002149105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/149/105/GCA_002149105.1_ASM214910v1	-	-
Vibrio alginolyticus	663	PRJNA345285	345285	Proteobacteria	Gammaproteobacteria	5.65514	44.3238	chromosome I:NZ_CP017913.1/CP017913.1; chromosome II:NZ_CP017914.1/CP017914.1; plasmid pL300:NZ_CP017915.1/CP017915.1	-	3	5322	5046	5/9/17	5/24/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05860642	GCA_002149085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/149/085/GCA_002149085.1_ASM214908v1	-	K08M3
Vibrio alginolyticus	663	PRJNA345280	345280	Proteobacteria	Gammaproteobacteria	5.66625	44.3198	chromosome 1:NZ_CP017899.1/CP017899.1; chromosome 2:NZ_CP017900.1/CP017900.1; plasmid pL294:NZ_CP017901.1/CP017901.1	-	3	5319	5031	5/9/17	5/22/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05860639	GCA_002119545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/545/GCA_002119545.1_ASM211954v1	-	K04M5
Vibrio alginolyticus	663	PRJNA345284	345284	Proteobacteria	Gammaproteobacteria	5.672	44.3189	chromosome 1:NZ_CP017907.1/CP017907.1; chromosome 2:NZ_CP017908.1/CP017908.1; plasmid pL29:NZ_CP017910.1/CP017910.1; plasmid pL291:NZ_CP017909.1/CP017909.1	-	4	5325	5034	5/9/17	5/22/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05860641	GCA_002119565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/565/GCA_002119565.1_ASM211956v1	-	K06K5
Salinispora arenicola CNX814	1169171	PRJNA175176	175176	Terrabacteria group	Actinobacteria	5.68846	69.6	-	ARHC01	65	5189	4858	4/19/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441691	GCA_000375105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/105/GCA_000375105.1_ASM37510v1	-	CNX814
Lactobacillus plantarum 16	1327988	PRJNA198762	198762	Terrabacteria group	Firmicutes	3.36102	44.3093	chromosome:NC_021514.1/CP006033.1; plasmid Lp16A:NC_021515.1/CP006034.1; plasmid Lp16B:NC_021525.1/CP006035.1; plasmid Lp16C:NC_021516.1/CP006036.1; plasmid Lp16D:NC_021526.1/CP006037.1; plasmid Lp16E:NC_021517.1/CP006038.1; plasmid Lp16F:NC_021518.1/CP006039.1; plasmid Lp16G:NC_021527.1/CP006040.1; plasmid Lp16H:NC_021519.1/CP006041.1; plasmid Lp16I:NC_021528.1/CP006042.1; plasmid Lp16L:NC_021520.1/CP006043.1	-	11	3281	3076	6/18/13	3/24/17	Complete Genome	University College Cork	SAMN02604115	GCA_000412205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/205/GCA_000412205.1_ASM41220v1	23908281	16
Ralstonia pickettii	329	PRJNA335691	335691	Proteobacteria	Betaproteobacteria	5.24436	63.7	-	MCGB01	113	5014	4725	8/5/16	4/5/17	Contig	Universidade Catolica Portuguesa	SAMN05450313	GCA_001699815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/815/GCA_001699815.1_ASM169981v1	-	H2Cu5
Geobacillus stearothermophilus	1422	PRJNA270597	270597	Terrabacteria group	Firmicutes	2.77715	52.5	-	LQYV01	166	3037	2588	3/11/16	4/5/17	Scaffold	University of Groningen	SAMN03267293	GCA_001587495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/495/GCA_001587495.1_B4109	27151781	B4109
Shewanella psychrophila	225848	PRJNA306925	306925	Proteobacteria	Gammaproteobacteria	6.35341	44.3	chromosome:NZ_CP014782.1/CP014782.1	-	1	5581	5276	2/21/17	2/23/17	Complete Genome	Shanghai Jiao Tong University	SAMN04370084	GCA_002005305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/305/GCA_002005305.1_ASM200530v1	-	WP2
Photobacterium damselae subsp. piscicida	38294	PRJDB5578	382531	Proteobacteria	Gammaproteobacteria	4.54725	41.4	-	BDMQ01	7	4633	3917	4/8/17	5/31/17	Contig	University of Miyazaki Faculty of Agriculture	SAMD00076069	GCA_002157645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/645/GCA_002157645.1_ASM215764v1	-	OT-51443
Borrelia afzelii IPT142	1408886	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.07226	28.2	-	AYCJ01	554	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378853	GCA_000501575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/575/GCA_000501575.1_BorAfzIPT142	-	IPT142
Faecalibacterium prausnitzii	853	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.04195	58	-	MNSP01	271	1097	638	12/23/16	12/23/16	Scaffold	None	SAMN05717273	GCA_001916535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/535/GCA_001916535.1_ASM191653v1	27819664	-
Vibrio harveyi CAIM 1792	1125980	PRJNA78833	78833	Proteobacteria	Gammaproteobacteria	5.82741	44.7	-	AHHQ01	86	5469	5244	2/3/12	5/19/17	Contig	"CIAD, A.C."	SAMN02469604	GCA_000259935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/935/GCA_000259935.1_ASM25993v1	22461546	CAIM 1792
Bifidobacterium adolescentis	1680	PRJEB10915	297013	Terrabacteria group	Actinobacteria	2.23413	59.4	-	CZAA01	10	1866	1749	10/1/15	4/4/17	Contig	SC	SAMEA3545316	GCA_001406215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/215/GCA_001406215.1_13470_2_69	-	2789STDY5834850
Lactococcus garvieae LG9	1091039	PRJNA73567	73567	Terrabacteria group	Firmicutes	2.08227	38.5	-	AGQY01	139	2099	1993	12/1/11	4/4/17	Contig	University of Milan-Department of Food Science and Microbiology	SAMN02471888	GCA_000236535.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/535/GCA_000236535.3_LgarvieLg9_1.0	22328751	LG9
Aggregatibacter actinomycetemcomitans	714	PRJNA328135	328135	Proteobacteria	Gammaproteobacteria	2.29125	44.3	chromosome:NZ_CP016553.1/CP016553.1	-	1	2281	2094	7/21/16	4/5/17	Complete Genome	Rutgers School of Dental Medicine	SAMN05363964	GCA_001690155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/155/GCA_001690155.1_ASM169015v1	27834722	IDH781
Orientia tsutsugamushi str. Karp	1359185	PRJNA322204	322204	Proteobacteria	Alphaproteobacteria	2.02672	30.4	-	LYMA02	108	2064	1382	6/2/16	4/6/17	Contig	Center for Biologics Evaluation and Research Food and Drug Administration	SAMN05075509	GCA_001654785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/654/785/GCA_001654785.2_O_tsutsugamushi_Karp_2M	27540052	Karp
Aggregatibacter actinomycetemcomitans NUM4039	1407647	PRJDB1482	296409	Proteobacteria	Gammaproteobacteria	2.38285	44.3	chromosome Unknown:AP014520.1	-	1	2437	2364	9/18/15	10/7/16	Complete Genome	Nihon University School of Dentistry at Matsudo	SAMD00061020	GCA_001547775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/775/GCA_001547775.1_ASM154777v1	-	NUM 4039
Sulfurovum lithotrophicum	206403	PRJNA279430	279430	Proteobacteria	delta/epsilon subdivisions	2.21789	44.3	chromosome:NZ_CP011308.1/CP011308.1	-	1	2225	2144	5/4/15	4/17/17	Complete Genome	KRIBB	SAMN03494311	GCA_000987835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/987/835/GCA_000987835.1_ASM98783v1	-	ATCC BAA-797
Porphyromonas gingivalis F0569	1227270	PRJNA173938	173938	FCB group	Bacteroidetes/Chlorobi group	2.24923	48.4	-	AWUV01	111	1954	1812	9/16/13	4/1/17	Scaffold	Washington University	SAMN02436724	GCA_000467815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/815/GCA_000467815.1_ASM46781v1	-	F0569
Ureaplasma parvum serovar 14 str. ATCC 33697	515609	PRJNA20185	20185	Terrabacteria group	Tenericutes	0.749965	25.6	-	ABER01	8	631	576	8/8/07	4/7/17	Contig	J. Craig Venter Institute	SAMN02436240	GCA_000171355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/355/GCA_000171355.1_ASM17135v1	-	ATCC 33697
Ureaplasma urealyticum serovar 13 str. ATCC 33698	515611	PRJNA20405	20405	Terrabacteria group	Tenericutes	0.846596	26	-	ABEV01	5	693	633	8/15/07	3/30/17	Contig	J. Craig Venter Institute	SAMN02436170	GCA_000171395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/395/GCA_000171395.1_ASM17139v1	-	ATCC 33698
Dehalobacter sp. CF	1131462	PRJNA80805	80805	Terrabacteria group	Firmicutes	3.09205	44.3	chromosome:NC_018867.1/CP003870.1	-	1	2985	2882	10/16/12	4/8/17	Complete Genome	University of Toronto	SAMN01141377	GCA_000305815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/815/GCA_000305815.1_ASM30581v1	23284863	CF
Aliivibrio fischeri	668	PRJNA311605	311605	Proteobacteria	Gammaproteobacteria	4.3099	38.1	-	LTZA01	42	4008	3910	5/9/16	4/5/17	Contig	MIT	SAMN04519656	GCA_001640415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/415/GCA_001640415.1_ASM164041v1	27128997	MB13B1
Aggregatibacter actinomycetemcomitans D7S-1	694569	PRJNA41903	41903	Proteobacteria	Gammaproteobacteria	2.30896	44.3	chromosome:NC_017846.2/CP003496.2	-	1	2301	2101	5/2/12	6/15/17	Complete Genome	USC School of Dentistry	SAMN02604275	GCA_000163615.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/615/GCA_000163615.3_ASM16361v3	"2,034,826,526,420,790"	D7S-1
Phaeobacter gallaeciensis DSM 26640	1423144	PRJNA188096	188096	Proteobacteria	Alphaproteobacteria	4.54274	59.5	-	AOQA01	45	4398	4300	1/16/15	4/10/17	Contig	Roseobacter SFB	SAMN03287063	GCA_000819625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/625/GCA_000819625.1_ASM81962v1	25197473	DSM 26640
Marinomonas posidonica IVIA-Po-181	491952	PRJNA52545	52545	Proteobacteria	Gammaproteobacteria	3.89994	44.3	chromosome:NC_015559.1/CP002771.1	-	1	3614	3483	5/20/11	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713622	GCA_000214215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/215/GCA_000214215.1_ASM21421v1	23458837	IVIA-Po-181
Burkholderia multivorans CGD2	513052	PRJNA30581	30581	Proteobacteria	Betaproteobacteria	6.55415	67	-	ACFC01	37	6311	6087	1/22/09	7/9/17	Contig	The J. Craig Venter Institute	SAMN02436264	GCA_000182275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/182/275/GCA_000182275.1_JCVI-gbv2-v1.0	23105085	CGD2
Borreliella burgdorferi	139	PRJNA264151	264151	Spirochaetes	Spirochaetia	1.46297	28.2304	chromosome:NZ_CP009656.1/CP009656.1; plasmid cp-9:NZ_CP009675.1/CP009675.1; plasmid cp26:NZ_CP009671.1/CP009671.1; plasmid cp32-1:NZ_CP009662.1/CP009662.1; plasmid cp32-3:NZ_CP009665.1/CP009665.1; plasmid cp32-4:NZ_CP009664.1/CP009664.1; plasmid cp32-6:NZ_CP009666.1/CP009666.1; plasmid cp32-7:NZ_CP009661.1/CP009661.1; plasmid cp32-9:NZ_CP009663.1/CP009663.1; plasmid lp17:NZ_CP009674.1/CP009674.1; plasmid lp21:NZ_CP009673.1/CP009673.1; plasmid lp25:NZ_CP009672.1/CP009672.1; plasmid lp28-1:NZ_CP009669.1/CP009669.1; plasmid lp28-2:NZ_CP009667.1/CP009667.1; plasmid lp28-3:NZ_CP009668.1/CP009668.1; plasmid lp28-4:NZ_CP009670.1/CP009670.1; plasmid lp32-8:NZ_CP009660.1/CP009660.1; plasmid lp36:NZ_CP009659.1/CP009659.1; plasmid lp38:NZ_CP009658.1/CP009658.1; plasmid lp54:NZ_CP009657.1/CP009657.1	-	20	1523	1417	10/28/14	9/21/17	Chromosome	BEI Resources/American Type	SAMN03114892	GCA_000769595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/595/GCA_000769595.1_ASM76959v1	-	B31
Treponema pallidum subsp. pallidum str. Nichols	243276	PRJNA30655	30655	Spirochaetes	Spirochaetia	1.13963	52.8	chromosome:NC_021490.2/CP004010.2	-	1	1065	1004	6/11/13	4/1/17	Chromosome	Baylor College of Medicine	SAMN02603005	GCA_000410535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/535/GCA_000410535.2_ASM41053v2	24058545	Nichols
Chlorobium chlorochromatii CaD3	340177	PRJNA13921	13921	FCB group	Bacteroidetes/Chlorobi group	2.57208	44.3	chromosome:NC_007514.1/CP000108.1	-	1	2183	2060	10/26/05	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02598328	GCA_000012585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/585/GCA_000012585.1_ASM1258v1	-	CaD3
Ochrobactrum anthropi	529	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	4.97784	56	-	DBIF01	35	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451070	GCA_002296345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/345/GCA_002296345.1_ASM229634v1	28894102	-
Lactobacillus plantarum	1590	PRJNA343197	343197	Terrabacteria group	Firmicutes	3.3519	44.2989	chromosome:NZ_CP017354.1/CP017354.1; plasmid pL125-1:NZ_CP017355.1/CP017355.1; plasmid pL125-2:NZ_CP017356.1/CP017356.1; plasmid pL125-3:NZ_CP017357.1/CP017357.1; plasmid pL125-4:NZ_CP017358.1/CP017358.1; plasmid pL125-5:NZ_CP017359.1/CP017359.1; plasmid pL125-6:NZ_CP017360.1/CP017360.1; plasmid pL125-7:NZ_CP017361.1/CP017361.1; plasmid pL125-8:NZ_CP017362.1/CP017362.1	-	9	3291	3054	5/2/17	5/6/17	Complete Genome	Technische Universitaet Muenchen	SAMN05805044	GCA_002117245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/245/GCA_002117245.1_ASM211724v1	-	TMW 1.25
Clavibacter michiganensis subsp. tessellarius	31965	PRJNA308241	308241	Terrabacteria group	Actinobacteria	3.29691	73.2	-	LQXA01	61	3124	2997	4/8/16	4/5/17	Contig	Eastern Cereal and Oilseed Research Centre	SAMN04390115	GCA_001618005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/005/GCA_001618005.1_ASM161800v1	-	DOAB 609
Brucella canis 79/122	1169222	PRJNA173506	173506	Proteobacteria	Alphaproteobacteria	3.28963	57.2	-	AQJY01	3	3330	3122	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN00839703	GCA_000370585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/585/GCA_000370585.1_Bruc_cani_79_122_V1	-	79/122
Lactobacillus plantarum subsp. plantarum	337330	PRJNA354504	354504	Terrabacteria group	Firmicutes	3.43363	44.2825	chromosome:NZ_CP018324.1/CP018324.1; plasmid pLP12-1:NZ_CP018325.1/CP018325.1; plasmid pLP12-2:NZ_CP018326.1/CP018326.1; plasmid pLP12-3:NZ_CP018327.1/CP018327.1; plasmid pLP12-4:NZ_CP018328.1/CP018328.1; plasmid pLP12-5:NZ_CP018329.1/CP018329.1; plasmid pLP12-6:NZ_CP018330.1/CP018330.1	-	7	3383	3027	12/19/16	3/28/17	Complete Genome	University of Malaya	SAMN06046789	GCA_001908455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/455/GCA_001908455.1_ASM190845v1	-	TS12
Xenorhabdus nematophila AN6/1	1437823	PRJEB5061	270266	Proteobacteria	Gammaproteobacteria	4.58666	44.2573	chromosome I:NZ_LN681227.1/LN681227.1; plasmid II:NZ_LN681228.1/LN681228.1	-	2	4219	3759	12/12/14	4/10/17	Complete Genome	UW MADISON	SAMEA2501488	GCA_000953355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/355/GCA_000953355.1_XNC2	-	AN6/1
Bradyrhizobium japonicum USDA 135	1038863	PRJNA163009	163009	Proteobacteria	Alphaproteobacteria	7.70332	64	-	AXAT01	547	7662	6704	9/30/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02441452	GCA_000472945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/945/GCA_000472945.1_ASM47294v1	-	USDA 135
Microcystis aeruginosa PCC 9807	1160283	PRJEA88179	88179	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.15571	42.6	-	CAIM01	267	5152	4588	5/28/12	3/31/17	Scaffold	Genoscope CEA	SAMEA2272564	GCA_000312225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/225/GCA_000312225.1_ASM31222v1	-	PCC 9807
Methanobrevibacter smithii TS146E	911122	PRJNA59659	59659	Euryarchaeota	Methanobacteria	1.95217	30.4	-	AELQ01	64	1884	1777	2/17/11	3/30/17	Contig	Washington University in St.Louis	SAMN02436683	GCA_000189915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/915/GCA_000189915.2_ASM18991v2	21317366	TS146E
Bifidobacterium dentium JCVIHMP022	553191	PRJNA31395	31395	Terrabacteria group	Actinobacteria	2.63658	58.4	-	AEHJ01	35	2297	2107	10/8/10	3/30/17	Scaffold	J. Craig Venter Institute	SAMN00115044	GCA_000149165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/149/165/GCA_000149165.2_ASM14916v1	-	JCVIHMP022
Streptococcus dysgalactiae subsp. equisimilis SK1250	1005706	PRJNA65585	65585	Terrabacteria group	Firmicutes	2.12251	39.6	-	AFUL01	1	2101	1873	7/21/11	3/30/17	Contig	J. Craig Venter Institute	SAMN00621724	GCA_000221105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/105/GCA_000221105.2_ASM22110v2	-	SK1250
Borrelia garinii IPT96	1408834	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.24544	28	-	AYAJ01	61	1238	760	12/3/13	4/2/17	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378801	GCA_000501055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/055/GCA_000501055.1_BorGarIPT96	-	IPT96
Streptococcus mutans TCI-109	1074114	PRJNA71979	71979	Terrabacteria group	Firmicutes	1.80167	37	-	AGKG01	146	1807	1692	10/6/11	3/22/17	Contig	JCVI	SAMN02436443	GCA_000228765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/765/GCA_000228765.2_SMUT4-NEX_3-109	-	TCI-109
Lactobacillus plantarum	1590	PRJNA397225	397225	Terrabacteria group	Firmicutes	3.58159	44.2489	chromosome:NZ_CP023174.1/CP023174.1; plasmid pLtBDGP2A:NZ_CP023175.1/CP023175.1; plasmid pLtBDGP2B:NZ_CP023176.1/CP023176.1; plasmid pLtBDGP2C:NZ_CP023177.1/CP023177.1; plasmid pLtBDGP2D:NZ_CP023178.1/CP023178.1	-	5	3559	3297	9/12/17	9/14/17	Complete Genome	Lawrence Berkeley National Laboratory	SAMN07593867	GCA_002290185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/185/GCA_002290185.1_ASM229018v1	-	BDGP2
Lactobacillus buchneri CD034	1071400	PRJNA71051	71051	Terrabacteria group	Firmicutes	2.56317	44.2381	chromosome:NC_018610.1/CP003043.1; plasmid pCD034-1:NC_016035.1/JN084215.1; plasmid pCD034-2:NC_016034.1/JN084214.1; plasmid pCD034-3:NC_018611.1/CP003044.1	-	4	2475	2353	9/18/12	4/8/17	Complete Genome	CeBiTec	SAMN02603054	GCA_000298115.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/115/GCA_000298115.2_ASM29811v2	22465289	CD034
Lactobacillus plantarum	1590	PRJNA301506	301506	Terrabacteria group	Firmicutes	3.56458	44.2224	chromosome:NZ_CP013149.1/CP013149.1; plasmid pMF1298-1:NZ_CP013150.1/CP013150.1; plasmid pMF1298-2:NZ_CP013151.1/CP013151.1; plasmid unnamed1:NZ_CP013152.1/CP013152.1; plasmid unnamed10:NZ_CP013161.1/CP013161.1; plasmid unnamed11:NZ_CP013162.1/CP013162.1; plasmid unnamed12:NZ_CP013163.1/CP013163.1; plasmid unnamed13:NZ_CP013164.1/CP013164.1; plasmid unnamed14:NZ_CP013165.1/CP013165.1; plasmid unnamed15:NZ_CP013166.1/CP013166.1; plasmid unnamed16:NZ_CP013167.1/CP013167.1; plasmid unnamed17:NZ_CP013168.1/CP013168.1; plasmid unnamed18:NZ_CP013169.1/CP013169.1; plasmid unnamed19:NZ_CP013170.1/CP013170.1; plasmid unnamed2:NZ_CP013153.1/CP013153.1; plasmid unnamed20:NZ_CP013171.1/CP013171.1; plasmid unnamed21:NZ_CP013172.1/CP013172.1; plasmid unnamed22:NZ_CP013173.1/CP013173.1; plasmid unnamed23:NZ_CP013174.1/CP013174.1; plasmid unnamed24:NZ_CP013175.1/CP013175.1; plasmid unnamed25:NZ_CP013176.1/CP013176.1; plasmid unnamed26:NZ_CP013177.1/CP013177.1; plasmid unnamed3:NZ_CP013154.1/CP013154.1; plasmid unnamed4:NZ_CP013155.1/CP013155.1; plasmid unnamed5:NZ_CP013156.1/CP013156.1; plasmid unnamed6:NZ_CP013157.1/CP013157.1; plasmid unnamed7:NZ_CP013158.1/CP013158.1; plasmid unnamed8:NZ_CP013159.1/CP013159.1; plasmid unnamed9:NZ_CP013160.1/CP013160.1	-	29	3489	3251	11/17/16	3/28/17	Complete Genome	Nofima	SAMN04251328	GCA_001880185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/185/GCA_001880185.1_ASM188018v1	-	MF1298
Lactobacillus plantarum	1590	PRJNA343197	343197	Terrabacteria group	Firmicutes	3.40013	44.222	chromosome:NZ_CP017363.1/CP017363.1; plasmid pL1277-1:NZ_CP017364.1/CP017364.1; plasmid pL1277-10:NZ_CP017369.1/CP017369.1; plasmid pL1277-2:NZ_CP017365.1/CP017365.1; plasmid pL1277-3:NZ_CP017366.1/CP017366.1; plasmid pL1277-4:NZ_CP017367.1/CP017367.1; plasmid pL1277-5:NZ_CP017368.1/CP017368.1; plasmid pL1277-6:NZ_CP017370.1/CP017370.1; plasmid pL1277-7:NZ_CP017371.1/CP017371.1; plasmid pL1277-8:NZ_CP017372.1/CP017372.1; plasmid pL1277-9:NZ_CP017373.1/CP017373.1	-	11	3339	3096	5/2/17	5/6/17	Complete Genome	Technische Universitaet Muenchen	SAMN05805045	GCA_002117265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/265/GCA_002117265.1_ASM211726v1	-	TMW 1.277
Lactobacillus buchneri NRRL B-30929	511437	PRJNA29003	29003	Terrabacteria group	Firmicutes	2.58831	44.2148	chromosome:NC_015428.1/CP002652.1; plasmid pLBUC01:NC_015420.1/CP002653.1; plasmid pLBUC02:NC_015429.1/CP002654.1; plasmid pLBUC03:NC_015421.1/CP002655.1	-	4	2539	2368	4/18/11	4/7/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713605	GCA_000211375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/211/375/GCA_000211375.1_ASM21137v1	21622751	NRRL B-30929
Rhizobium etli 8C-3	538025	PRJNA29559	29559	Proteobacteria	Alphaproteobacteria	3.4695	61.1	-	ABRA01	2725	-	-	6/17/08	1/8/14	Contig	"Centro de Ciencias Genomicas, Universidad Nacional Autonoma de Mexico"	SAMN02469450	GCA_000172735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/735/GCA_000172735.1_ASM17273v1	-	8C-3
Capnocytophaga haemolytica	45243	PRJEB6403	251923	FCB group	Bacteroidetes/Chlorobi group	2.6885	44.2	chromosome 1:NZ_LT906449.1/LT906449.1	-	1	2381	2249	8/15/17	8/28/17	Complete Genome	SC	SAMEA44541418	GCA_900187255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/255/GCA_900187255.1_51184_F02	-	NCTC12947
Comamonas testosteroni	285	PRJNA217887	217887	Proteobacteria	Betaproteobacteria	5.35507	61.1	-	AWOS01	109	4864	4686	10/1/14	4/2/17	Contig	Huazhong Agricultural University	SAMN02768803	GCA_000761235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/235/GCA_000761235.1_CJC8v1	-	JC8
Bacillus mycoides	1405	PRJNA243595	243595	Terrabacteria group	Firmicutes	5.37413	35.4	-	JMQD01	121	5716	5221	9/2/14	4/2/17	Contig	Los Alamos National Laboratory	SAMN02740844	GCA_000746965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/965/GCA_000746965.1_BHU_1	25301645	Flugge 10206
Yersinia frederiksenii	29484	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.69463	46.8	-	CQBX01	35	4362	4187	3/22/15	4/3/17	Scaffold	SC	SAMEA859945	GCA_001105765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/765/GCA_001105765.1_4821_5_3	-	FCF208
Yersinia kristensenii	28152	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.49061	48.8	-	CQEM01	53	4170	3953	3/22/15	4/3/17	Scaffold	SC	SAMEA859891	GCA_001115185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/185/GCA_001115185.1_5139_3_1	-	IP27925
Bifidobacterium bifidum NCIMB 41171	398513	PRJNA30055	30055	Terrabacteria group	Actinobacteria	2.21639	62.8	-	AKCA01	1	1891	1759	6/15/12	3/30/17	Contig	Broad Institute	SAMN02463676	GCA_000273525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/525/GCA_000273525.1_PB_Bifi_bifi_NCIMB_41171_V1	22829535	NCIMB 41171
Alteromonas macleodii	28108	PRJNA273644	273644	Proteobacteria	Gammaproteobacteria	4.66716	44.6	-	JXRW01	125	4151	3923	7/14/15	4/3/17	Contig	MIT	SAMN03295007	GCA_001077695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/695/GCA_001077695.1_ASM107769v1	26316635	MIT1002
Micrococcus luteus	1270	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.64271	72.8	-	JUTN01	240	2542	2334	7/10/15	4/3/17	Contig	University of Washington	SAMN03197983	GCA_001066245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/245/GCA_001066245.1_ASM106624v1	26230489	773_MLUT
Streptococcus equi subsp. zooepidemicus SzAM60	1381091	PRJNA214018	214018	Terrabacteria group	Firmicutes	2.11601	41.4	-	JATX01	114	2039	1856	2/17/15	3/25/17	Contig	Copenhagen University	SAMN02298724	GCA_000876285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/285/GCA_000876285.1_ASM87628v1	-	SzAM60
Helicobacter pullorum	35818	PRJNA326715	326715	Proteobacteria	delta/epsilon subdivisions	1.80403	34.4	-	MAPE01	140	1786	1672	8/4/16	4/5/17	Contig	University of Hyderabad	SAMN05291440	GCA_001698695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/695/GCA_001698695.1_ASM169869v1	-	NAP2W5
Paenibacillus larvae subsp. larvae	147375	PRJNA362897	362897	Terrabacteria group	Firmicutes	4.28995	44.2	chromosome:NZ_CP019687.1/CP019687.1	-	1	4460	3911	2/17/17	4/6/17	Complete Genome	CT Agric Expt Station	SAMN06281678	GCA_002003265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/003/265/GCA_002003265.1_ASM200326v1	-	ATCC 9545
Haemophilus parasuis SW114	1275966	PRJNA184679	184679	Proteobacteria	Gammaproteobacteria	1.93854	39.7	-	APBU01	98	1908	1677	8/7/13	4/1/17	Contig	Iowa State University	SAMN02470068	GCA_000444565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/565/GCA_000444565.1_ASM44456v1	24051319	SW114
Alteromonas sp. Mex14	1917157	PRJNA352689	352689	Proteobacteria	Gammaproteobacteria	4.48946	44.2	chromosome:CP018023.1	-	1	3807	3713	11/28/16	11/28/16	Complete Genome	University Miguel Hernandez	SAMN05991975	GCA_001886375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/375/GCA_001886375.1_ASM188637v1	-	Mex14
Aggregatibacter actinomycetemcomitans	714	PRJNA288377	288377	Proteobacteria	Gammaproteobacteria	2.36791	44.2	chromosome:NZ_CP012959.1/CP012959.1	-	1	2397	2219	3/21/16	4/5/17	Complete Genome	The University of Texas at Austin	SAMN03799081	GCA_001594265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/265/GCA_001594265.1_ASM159426v1	-	624
Capnocytophaga haemolytica	45243	PRJNA282954	282954	FCB group	Bacteroidetes/Chlorobi group	2.68848	44.2	chromosome:NZ_CP014227.1/CP014227.1	-	1	2380	2242	2/9/16	4/11/17	Complete Genome	The Forsyth Institute	SAMN04435862	GCA_001553545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/545/GCA_001553545.1_ASM155354v1	-	CCUG 32990
Francisella philomiragia	28110	PRJNA244552	244552	Proteobacteria	Gammaproteobacteria	2.05088	32.6	-	JOUE01	4	1965	1893	8/19/14	4/2/17	Scaffold	Los Alamos National Laboratory	SAMN02867630	GCA_000741925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/925/GCA_000741925.1_ASM74192v1	25291764	FAJ
Vibrio splendidus	29497	PRJNA302718	302718	Proteobacteria	Gammaproteobacteria	5.29219	44.2	-	LNRF01	55	4713	4488	2/10/16	4/4/17	Contig	University of Cambridge	SAMN04279312	GCA_001557875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/875/GCA_001557875.1_ASM155787v1	-	MOR1
Paenibacillus odorifer	189426	PRJNA260728	260728	Terrabacteria group	Firmicutes	6.81247	44.2	chromosome:NZ_CP009428.1/CP009428.1	-	1	5997	5787	9/22/14	4/2/17	Complete Genome	Cornell University	SAMN03025771	GCA_000758725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/725/GCA_000758725.1_ASM75872v1	-	DSM 15391
Brucella ceti B1/94	520457	PRJNA230241	230241	Proteobacteria	Alphaproteobacteria	3.2729	57.3	-	AZBH02	206	3077	2682	5/1/14	10/21/14	Contig	Smi	SAMN02427356	GCA_000662035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/035/GCA_000662035.2_Bceti2.0	25278518	B1/94
Enterococcus casseliflavus NBRC 100478	1218087	PRJDB260	172083	Terrabacteria group	Firmicutes	3.49826	42.4	-	BCPT01	54	3454	3290	1/26/16	4/4/17	Contig	National Institute of Technology and Evaluation	SAMD00045727	GCA_001544095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/095/GCA_001544095.1_ASM154409v1	-	NBRC 100478
Enterococcus gallinarum	1353	PRJNA270385	270385	Terrabacteria group	Firmicutes	3.73796	39.8	-	JXKP01	134	3620	3432	11/25/16	4/16/17	Scaffold	Inner Mongolia Agricultural University	SAMN03267172	GCA_001886155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/155/GCA_001886155.1_ASM188615v1	-	DSM 24841
Bacillus megaterium	1404	PRJNA314371	314371	Terrabacteria group	Firmicutes	6.26376	37.3	-	LUCO01	92	6436	6143	3/18/16	4/5/17	Scaffold	"Northwest Institute of Plateau Biology, Chinese Academy of Sciences"	SAMN04534546	GCA_001593805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/805/GCA_001593805.1_ASM159380v1	-	BHG1.1
Burkholderia glumae 336gr-1	1417989	PRJNA226733	226733	Proteobacteria	Betaproteobacteria	6.51181	68.4	-	AYPW01	2457	-	-	12/4/13	12/30/13	Contig	Louisiana State University	SAMN02393890	GCA_000503955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/955/GCA_000503955.1_BurGlu1.0	23563926	336gr-1
Clostridium sporogenes	1509	PRJNA266242	266242	Terrabacteria group	Firmicutes	4.10191	27.9	-	JZJQ01	213	3898	3682	3/23/15	4/3/17	Contig	Centers for Disease Control and Prevention	SAMN03169464	GCA_000960235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/235/GCA_000960235.1_ASM96023v1	-	88-0163
Desulfitobacterium dichloroeliminans LMG P-21439	871963	PRJNA61519	61519	Terrabacteria group	Firmicutes	3.62445	44.2	chromosome:NC_019903.1/CP003344.1	-	1	3463	3300	12/19/12	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02232012	GCA_000243135.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/135/GCA_000243135.3_ASM24313v3	-	LMG P-21439
Providencia stuartii	588	PRJNA281485	281485	Proteobacteria	Gammaproteobacteria	4.72115	40.4	-	LVIE01	243	4448	3824	10/25/16	4/5/17	Contig	Texas A&M University	SAMN03490544	GCA_001853385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/385/GCA_001853385.1_ASM185338v1	-	Crippen
Bacteroides ovatus str. 3725 D9 iii	1339347	PRJNA206124	206124	FCB group	Bacteroidetes/Chlorobi group	6.9807	42.4	-	JNHG01	556	5872	5452	6/9/14	4/2/17	Contig	IGS	SAMN02370948	GCA_000699665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/665/GCA_000699665.1_ASM69966v1	-	3725 D9 iii
Bacteroides uniformis	820	PRJEB8300	276430	FCB group	Bacteroidetes/Chlorobi group	4.51501	47.1	-	CELP01	929	3760	3340	2/26/15	4/4/17	Contig	CGS-GL	SAMEA3217997	GCA_001403955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/403/955/GCA_001403955.1_2a7B_assembly2	-	2a3A
Treponema denticola MYR-T	999433	PRJNA64917	64917	Spirochaetes	Spirochaetia	2.93585	37.9	-	AGDX01	2	2826	2680	2/7/13	4/2/17	Scaffold	Broad Institute	SAMN02596723	GCA_000338515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/338/515/GCA_000338515.1_Trep_dent_MYR-T_V1	-	MYR-T
Bordetella bronchiseptica 1289	1208657	PRJEB139	178266	Proteobacteria	Betaproteobacteria	5.20852	68.2	-	CAKS01	1	4895	4795	10/12/12	5/18/17	Scaffold	WTSI	SAMEA2272559	GCA_000313085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/085/GCA_000313085.1_ASM31308v1	-	1289
Mageeibacillus indolicus UPII9-5	699246	PRJNA42555	42555	Terrabacteria group	Firmicutes	1.80975	44.2	chromosome:NC_013895.2/CP001850.2	-	1	1565	1455	2/19/10	9/3/17	Complete Genome	JCVI	SAMN00006219	GCA_000025225.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/225/GCA_000025225.2_ASM2522v1	-	UPII9-5
Mesorhizobium loti	381	PRJNA325578	325578	Proteobacteria	Alphaproteobacteria	6.56604	62.9	-	LZTL01	36	6462	6157	6/20/16	4/5/17	Contig	Curtin University	SAMN05241056	GCA_001671465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/671/465/GCA_001671465.1_ASM167146v1	-	R7ANS::ICEMlSym343
Vibrio shilonii	62153	PRJNA355548	355548	Proteobacteria	Gammaproteobacteria	5.81218	44.1937	chromosome 1:NZ_CP018308.1/CP018308.1; chromosome 2:NZ_CP018309.1/CP018309.1; plasmid unnamed:NZ_CP018310.1/CP018310.1	-	3	5356	5143	7/5/17	7/7/17	Complete Genome	Ocean University of China	SAMN06076956	GCA_002214345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/345/GCA_002214345.1_ASM221434v1	-	QT6D1
Paenibacillus larvae subsp. pulvifaciens	1477	PRJNA362897	362897	Terrabacteria group	Firmicutes	4.5207	44.192	chromosome:NZ_CP019794.1/CP019794.1; plasmid pPLP1:NZ_CP019795.1/CP019795.1; plasmid pPLP2:NZ_CP019796.1/CP019796.1	-	3	4751	3909	2/28/17	3/2/17	Complete Genome	CT Agric Expt Station	SAMN06299282	GCA_002007765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/765/GCA_002007765.1_ASM200776v1	-	ATCC 13537
Streptococcus gordonii	1302	PRJNA274768	274768	Terrabacteria group	Firmicutes	2.22877	40.4	-	JYOZ01	10	2209	2073	3/25/15	4/3/17	Contig	University at Buffalo	SAMN03334909	GCA_000963345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/345/GCA_000963345.1_ASM96334v1	25999552	I141
Paenibacillus larvae subsp. pulvifaciens	1477	PRJNA362897	362897	Terrabacteria group	Firmicutes	4.44421	44.191	chromosome:NZ_CP020327.1/CP020327.1; plasmid pPLP1:NZ_CP020328.1/CP020328.1; plasmid pPLP2.1:NZ_CP020329.1/CP020329.1	-	3	4611	4179	3/20/17	3/22/17	Complete Genome	CT Agric Expt Station	SAMN06461926	GCA_002043025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/025/GCA_002043025.1_ASM204302v1	-	CCM 38
Candidatus Doolittlea endobia	1778262	PRJEB12066	316505	Proteobacteria	Gammaproteobacteria	0.846562	44.1567	chromosome I:NZ_LN999833.1/LN999833.1; plasmid II:NZ_LN999834.1/LN999834.1	-	2	635	514	3/26/16	4/12/17	Complete Genome	UNIVERSITY OF SOUTH BOHEMIA	SAMEA3725905	GCA_900039485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/485/GCA_900039485.1_DEMHIR	-	-
Lactobacillus gasseri 202-4	630527	PRJNA36379	36379	Terrabacteria group	Firmicutes	1.82025	34.9	-	ACOZ01	70	1783	1659	6/3/09	3/30/17	Contig	J. Craig Venter Institute	SAMN00002206	GCA_000175055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/055/GCA_000175055.1_ASM17505v1	-	202-4
Lactobacillus plantarum	1590	PRJNA353584	353584	Terrabacteria group	Firmicutes	3.47601	44.1467	chromosome:NZ_CP018209.1/CP018209.1; plasmid pLPBLS41_1:NZ_CP018210.1/CP018210.1; plasmid pLPBLS41_2:NZ_CP018211.1/CP018211.1; plasmid pLPBLS41_3:NZ_CP018212.1/CP018212.1; plasmid pLPBLS41_4:NZ_CP018213.1/CP018213.1; plasmid pLPBLS41_5:NZ_CP018214.1/CP018214.1	-	6	3401	3208	5/2/17	5/6/17	Complete Genome	KOOKMIN UNIVERSITY	SAMN06016049	GCA_002116955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/116/955/GCA_002116955.1_ASM211695v1	-	BLS41
Chlamydia muridarum str. Nigg	243161	PRJNA38159	38159	PVC group	Chlamydiae	1.07064	40.2	-	ACOV01	5	956	898	6/4/09	3/30/17	Contig	UMIGS	SAMN02435948	GCA_000174975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/975/GCA_000174975.1_ASM17497v1	19470744	Nigg
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.06196	41.6	-	JJOU01	236	3521	3276	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708974	GCA_000978955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/978/955/GCA_000978955.1_gtlEnvA5udCFS	25756680	2.F.T.2.6
Bacillus subtilis	1423	PRJNA330772	330772	Terrabacteria group	Firmicutes	4.28252	44.1	chromosome:NZ_CP016767.1/CP016767.1	-	1	4338	4110	6/2/17	6/16/17	Complete Genome	China Agriculture Univercity	SAMN05425708	GCA_002163815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/815/GCA_002163815.1_ASM216381v1	-	CW14
Anaplasma phagocytophilum str. MRK	1392505	PRJNA216999	216999	Proteobacteria	Alphaproteobacteria	1.47923	41.6	-	JFBH01	9	1201	1059	5/12/14	4/2/17	Contig	University of Florida	SAMN02647123	GCA_000689655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/655/GCA_000689655.1_MRK1.0	"2,543,720,725,437,600"	MRK
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.15816	39.9	-	FPKZ01	3	1056	960	5/10/17	5/24/17	Contig	WTSI	SAMEA1094331	GCA_900118545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/545/GCA_900118545.1_7067_6_37	-	C1_98
Salmonella bongori serovar 48:i:-	1173776	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.43448	51.2	-	MXOH01	42	4354	4083	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367598	GCA_002035315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/315/GCA_002035315.1_ASM203531v1	-	BCW_1552
Bacteroides thetaiotaomicron	818	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	6.40034	43.1	-	CZAP01	52	5127	4909	10/1/15	4/4/17	Contig	SC	SAMEA3545362	GCA_001405895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/895/GCA_001405895.1_14207_7_22	-	2789STDY5834899
Streptococcus uberis C6344	1450181	PRJNA234018	234018	Terrabacteria group	Firmicutes	1.90741	36.5	-	JATA01	15	1929	1850	4/22/15	4/3/17	Contig	University of Nottingham	SAMN02570389	GCA_000975435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/975/435/GCA_000975435.1_ASM97543v1	25898893	C6344
Bartonella quintana JK 63	1134505	PRJNA81683	81683	Proteobacteria	Alphaproteobacteria	1.6122	39	-	AHPF01	3	1403	1210	6/12/14	4/10/17	Scaffold	Broad Institute	SAMN00778964	GCA_000708865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/865/GCA_000708865.1_Bart_quin_JK_63_V1	-	JK 63
Rhodobacter capsulatus R121	1415163	PRJNA225632	225632	Proteobacteria	Alphaproteobacteria	3.76069	66.6	-	AYQC01	36	3579	3445	12/11/13	4/4/17	Scaffold	University of British Columbia	SAMN02471351	GCA_000506565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/565/GCA_000506565.2_denovokmer150	24526637	R121
Clostridium tetani ATCC 454	1172202	PRJNA158341	158341	Terrabacteria group	Firmicutes	2.85262	28.4	-	LBNB01	67	2775	2659	5/1/15	4/3/17	Contig	"Perelman School of Medicine, University of Penn."	SAMN03579569	GCA_000987095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/987/095/GCA_000987095.1_ASM98709v1	-	ATCC 454
Lactobacillus acidophilus CIRM-BIA 445	1226678	PRJEB1531	200907	Terrabacteria group	Firmicutes	2.00201	34.6	-	CBLR01	22	1967	1841	7/7/13	4/1/17	Scaffold	INRA STLO	SAMEA2272655	GCA_000469765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/765/GCA_000469765.1_LaCIRM445V1	-	CIRM-BIA 445
Bartonella henselae str. Zeus	1134509	PRJNA81691	81691	Proteobacteria	Alphaproteobacteria	1.94092	38.2	-	AHPJ01	19	1726	1465	6/12/14	4/10/17	Scaffold	Broad Institute	SAMN00778968	GCA_000708485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/485/GCA_000708485.1_Bart_hens_Zeus_V1	-	Zeus
Bacillus subtilis	1423	PRJNA383806	383806	Terrabacteria group	Firmicutes	3.92318	44.1	chromosome:NZ_CP021169.1/CP021169.1	-	1	4103	3842	5/16/17	5/24/17	Complete Genome	"LP2VM, Departement of Biotechnology,University of Sciences and Technology of Oran Mohamed Boudiaf"	SAMN06808294	GCA_002142595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/595/GCA_002142595.1_ASM214259v1	-	TLO3
Burkholderiales bacterium YL45	1834205	PRJNA317592	317592	Proteobacteria	Betaproteobacteria	2.92311	44.1	chromosome:NZ_CP015403.2/CP015403.2	-	1	2646	2500	7/20/16	4/17/17	Complete Genome	University of Bern	SAMN04621614	GCA_001688905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/905/GCA_001688905.2_ASM168890v2	-	YL45
Photorhabdus temperata subsp. thracensis	230089	PRJNA278805	278805	Proteobacteria	Gammaproteobacteria	5.1471	44.1	chromosome:NZ_CP011104.1/CP011104.1	-	1	4562	4067	5/19/15	4/10/17	Complete Genome	Kyungpook National University	SAMN03433286	GCA_001010285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/285/GCA_001010285.1_ASM101028v1	26415660	DSM 15199
[Clostridium] cellulosi	29343	PRJEB6528	268803	Terrabacteria group	Firmicutes	2.22958	44.1	chromosome I:NZ_LM995447.1/LM995447.1	-	1	2054	1962	8/18/14	4/17/17	Complete Genome	CEBITEC	SAMEA2634676	GCA_000953215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/215/GCA_000953215.1_DG5	-	-
Pediococcus pentosaceus	1255	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.73951	37.3	-	JQBF01	28	1725	1619	11/6/15	4/4/17	Contig	Shanghai Majorbio	SAMN02797817	GCA_001437285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/285/GCA_001437285.1_ASM143728v1	26415554	DSM 20336
Aciduliprofundum sp. MAR08-339	673860	PRJNA73039	73039	Euryarchaeota	unclassified Euryarchaeota	1.43709	44.1	chromosome:NC_019942.1/CP003168.1	-	1	1549	1491	12/21/12	4/17/17	Complete Genome	JGI	SAMN02261429	GCA_000327505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/505/GCA_000327505.1_ASM32750v1	-	MAR08-339
Marinomonas mediterranea MMB-1	717774	PRJNA51765	51765	Proteobacteria	Gammaproteobacteria	4.68432	44.1	chromosome:NC_015276.1/CP002583.1	-	1	4278	4115	3/22/11	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713593	GCA_000192865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/865/GCA_000192865.1_ASM19286v1	22675599	MMB-1
Ferroglobus placidus DSM 10642	589924	PRJNA33635	33635	Euryarchaeota	Archaeoglobi	2.19627	44.1	chromosome:NC_013849.1/CP001899.1	-	1	2576	2479	2/16/10	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598503	GCA_000025505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/505/GCA_000025505.1_ASM2550v1	22180810	DSM 10642
Chromobacterium violaceum	536	PRJNA369804	369804	Proteobacteria	Betaproteobacteria	4.75899	65	-	MUKR01	53	4410	4251	4/6/17	4/8/17	Contig	Centers for Disease Control and Prevention	SAMN06294333	GCA_002081745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/745/GCA_002081745.1_ASM208174v1	-	16-419B
Brevibacterium linens	1703	PRJNA387187	387187	Terrabacteria group	Actinobacteria	4.09909	62.8	-	NRGP01	58	3766	3632	9/21/17	9/23/17	Scaffold	"Dutton Lab, UCSD"	SAMN07141155	GCA_002332395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/395/GCA_002332395.1_ASM233239v1	28644126	947_7
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.59454	67.3	-	LOVV01	68	6030	5766	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449212	GCA_001523585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/585/GCA_001523585.1_ASM152358v1	-	AZ-3-1-30-S1-D7
Prevotella fusca JCM 17724	1236517	PRJNA282954	282954	FCB group	Bacteroidetes/Chlorobi group	3.26181	44.0924	chromosome 1:NZ_CP012074.1/CP012074.1; chromosome 2:NZ_CP012075.1/CP012075.1	-	2	2685	2497	8/6/15	4/10/17	Complete Genome	The Forsyth Institute	SAMN03704035	GCA_001262015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/015/GCA_001262015.1_ASM126201v1	-	W1435
Staphylococcus haemolyticus	1283	PRJNA275683	275683	Terrabacteria group	Firmicutes	2.40307	32.8	-	LAKG01	99	2372	2214	4/27/15	3/26/17	Contig	Institute of Microbial Technology	SAMN03352181	GCA_000981145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/145/GCA_000981145.1_ASM98114v1	-	1HT3
Photorhabdus luminescens	29488	PRJNA378433	378433	Proteobacteria	Gammaproteobacteria	5.47145	42.6	-	MYFJ01	91	4679	4331	6/21/17	7/3/17	Contig	Universidad Autonoma del Estado de Morelos	SAMN06546650	GCA_002204205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/205/GCA_002204205.1_ASM220420v1	-	HIM3
Moorella thermoacetica	1525	PRJNA330926	330926	Terrabacteria group	Firmicutes	2.63435	55.8	-	MDDD01	31	2650	2522	11/10/16	4/5/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05430242	GCA_001875245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/245/GCA_001875245.1_ASM187524v1	-	DSM 12993
Brucella ovis IntaBari-2001-319-4082	1293918	PRJNA189530	189530	Proteobacteria	Alphaproteobacteria	3.29172	57.2	-	AQIM01	21	3412	3038	4/16/13	4/1/17	Contig	Broad Institute	SAMN01921151	GCA_000365965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/965/GCA_000365965.1_Bruc_ovis_IntaBari-2001-319-4082_V1	-	IntaBari-2001-319-4082
Campylobacter lari	201	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.49297	29.6	-	MJVW01	25	1537	1464	10/4/16	4/5/17	Scaffold	University of California at Davis	SAMN03359150	GCA_001761915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/915/GCA_001761915.1_ASM176191v1	-	BCW_3793
Lactobacillus plantarum	1590	PRJNA306257	306257	Terrabacteria group	Firmicutes	3.69274	44.0786	chromosome:NZ_CP013749.1/CP013749.1; plasmid unnamed1:NZ_CP013750.1/CP013750.1; plasmid unnamed2:NZ_CP013751.1/CP013751.1; plasmid unnamed3:NZ_CP013752.1/CP013752.1	-	4	3650	3414	8/12/16	3/28/17	Complete Genome	University of Alberta	SAMN04346869	GCA_001704315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/315/GCA_001704315.1_ASM170431v1	-	KP
Vibrio alginolyticus	663	PRJNA345286	345286	Proteobacteria	Gammaproteobacteria	4.88629	44.07	chromosome 1:NZ_CP017916.1/CP017916.1; chromosome 2:NZ_CP017917.1/CP017917.1	-	2	4378	4071	5/9/17	5/22/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05860643	GCA_002119525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/525/GCA_002119525.1_ASM211952v1	-	K08M4
Lactobacillus plantarum	1590	PRJNA306257	306257	Terrabacteria group	Firmicutes	3.69731	44.0684	chromosome:NZ_CP013753.1/CP013753.1; plasmid unnamed1:NZ_CP013754.1/CP013754.1; plasmid unnamed2:NZ_CP013755.1/CP013755.1; plasmid unnamed3:NZ_CP013756.1/CP013756.1	-	4	3670	3430	8/12/16	3/28/17	Complete Genome	University of Alberta	SAMN04346870	GCA_001704335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/335/GCA_001704335.1_ASM170433v1	-	DF
Cronobacter sakazakii	28141	PRJNA251799	251799	Proteobacteria	Gammaproteobacteria	4.54632	56.9	-	JOLG01	130	4437	4200	10/9/15	4/4/17	Scaffold	"Nottingham Trent University, UK"	SAMN02840766	GCA_001309015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/015/GCA_001309015.1_ASM130901v1	26438044	695
Klebsiella oxytoca 10-5243	883118	PRJNA52139	52139	Proteobacteria	Gammaproteobacteria	5.99446	55	-	AGDJ01	3	5711	5486	2/17/12	2/21/17	Scaffold	Broad Institute	SAMN02463894	GCA_000247855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/855/GCA_000247855.1_Kleb_oxyt_10-5243_V1	-	Oct-43
Erwinia amylovora CFBP 2585	1255305	PRJEB601	196607	Proteobacteria	Gammaproteobacteria	3.8217	53.516	plasmid pEA29:NC_020915.1/HF560645.1; plasmid pEA3:NC_020920.1/HF560646.1	CAOZ01	14	3597	3425	4/8/13	4/1/17	Contig	CeBiTec	SAMEA2272329	GCA_000367585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/585/GCA_000367585.2_ASM36758v2	-	CFBP 2585
Clostridium beijerinckii	1520	PRJNA322808	322808	Terrabacteria group	Firmicutes	5.88812	29.6	-	LZZG01	162	5206	4993	2/23/17	2/25/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05170529	GCA_002006135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/135/GCA_002006135.1_ASM200613v1	-	4J9
Streptomyces scabiei	1930	PRJNA309853	309853	Terrabacteria group	Actinobacteria	9.21956	71.2	-	LRTO01	1330	8642	7387	2/5/16	3/12/17	Contig	University of Florida	SAMN04441030	GCA_001550295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/550/295/GCA_001550295.1_ASM155029v1	-	96-15
Lactobacillus salivarius SMXD51	1108963	PRJNA75261	75261	Terrabacteria group	Firmicutes	1.96769	32.9697	plasmid pLS51B:NZ_AICL01000008.1/AICL01000008.1	AICL01	10	1929	1686	3/14/12	4/10/17	Scaffold	Oniris	SAMN02470767	GCA_000260335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/335/GCA_000260335.1_ASM26033v1	22582370	SMXD51
Glaciecola sp. 4H-3-7+YE-5	983545	PRJNA62887	62887	Proteobacteria	Gammaproteobacteria	5.39359	44.0608	chromosome:NC_015497.1/CP002526.1; plasmid pGLAAG01:NC_015498.1/CP002527.1	-	2	4706	4556	5/5/11	5/18/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713610	GCA_000212335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/212/335/GCA_000212335.1_ASM21233v1	21705587	4H-3-7+YE-5
Bacillus clausii	79880	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.28047	44.6	-	NPCD01	106	4242	4108	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372704	GCA_002271585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/585/GCA_002271585.1_assembly-7540-1_v1	-	7540-1
Gluconobacter oxydans	442	PRJNA288385	288385	Proteobacteria	Alphaproteobacteria	2.7834	61.1	-	LHZE01	86	2645	2498	3/7/16	4/5/17	Contig	Ghent University	SAMN03799275	GCA_001580635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/635/GCA_001580635.1_ASM158063v1	-	LMG 1399
Bacteroides vulgatus	821	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	5.04822	42.2	-	CYZI01	88	4319	4042	10/1/15	4/4/17	Contig	SC	SAMEA3545308	GCA_001404375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/375/GCA_001404375.1_13470_2_61	-	2789STDY5834842
Agrobacterium vitis	373	PRJNA328299	328299	Proteobacteria	Alphaproteobacteria	6.12437	57.6	-	MBEX01	88	5565	5340	11/1/16	4/5/17	Contig	Monash University Malaysia	SAMN05369579	GCA_001860165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/165/GCA_001860165.1_ASM186016v1	-	AT6
Xenorhabdus bovienii str. feltiae France	1397851	PRJEB4319	255477	Proteobacteria	Gammaproteobacteria	4.39197	44.7	-	CBST01	220	4050	3716	7/17/14	4/2/17	Scaffold	UWM	SAMEA3139094	GCA_000736655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/655/GCA_000736655.1_XBFFR_3525_PRJEB4319	-	feltiae France
Moraxella catarrhalis BC1	857576	PRJNA49917	49917	Proteobacteria	Gammaproteobacteria	1.95409	41.4	-	AERH01	43	1848	1701	3/22/11	3/30/17	Contig	Center for Genomic Sciences	SAMN02393789	GCA_000192985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/985/GCA_000192985.2_ASM19298v2	21269504	BC1
Listeria ivanovii	1638	PRJEB16545	349846	Terrabacteria group	Firmicutes	2.9647	36.9	-	FNMX01	33	2934	2794	10/22/16	3/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421782	GCA_900106685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/685/GCA_900106685.1_IMG-taxon_2675903700_annotated_assembly	-	ATCC 49954
Neisseria lactamica	486	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	2.74165	50.7	-	JUNU01	464	2697	2499	7/10/15	4/3/17	Contig	University of Washington	SAMN03198132	GCA_001067655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/655/GCA_001067655.1_ASM106765v1	26230489	919_NLAC
Peptoclostridium acidaminophilum DSM 3953	1286171	PRJNA187031	187031	Terrabacteria group	Firmicutes	3.05504	44.0529	chromosome:NZ_CP007452.1/CP007452.1; plasmid EAL2_808p:NZ_CP007453.1/CP007453.1	-	2	2930	2769	3/19/14	9/19/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02689753	GCA_000597865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/865/GCA_000597865.1_ASM59786v1	24926057	DSM 3953
Zymomonas mobilis subsp. pomaceae ATCC 29192	579138	PRJNA34927	34927	Proteobacteria	Alphaproteobacteria	2.06141	44.0421	chromosome:NC_015709.1/CP002865.1; plasmid pZYMOP01:NC_015715.1/CP002866.1; plasmid pZYMOP02:NC_015716.1/CP002867.1	-	3	1840	1748	6/17/11	3/30/17	Complete Genome	US DOE Joint Genome Institute	SAMN02232067	GCA_000218875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/875/GCA_000218875.1_ASM21887v1	21742897	ATCC 29192
Parabacteroides distasonis	823	PRJEB8305	276435	FCB group	Bacteroidetes/Chlorobi group	4.83441	46.9	-	CDRH01	1471	4193	3541	2/24/15	6/12/17	Contig	CGS-GL	SAMEA3218008	GCA_000939775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/775/GCA_000939775.1_2b7A_assembly	-	2b7A
Photobacterium angustum	661	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.7662	39.6	-	JZST01	77	4272	4009	3/10/15	4/3/17	Contig	FDA/CFSAN	SAMN03295476	GCA_000950225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/225/GCA_000950225.1_CFSAN029428_01.0	25931609	GCSL-A10-2
Bacillus weihenstephanensis	86662	PRJNA318341	318341	Terrabacteria group	Firmicutes	5.84689	35.1	-	LXLU01	144	6109	5584	10/12/16	4/5/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04819586	GCA_001757845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/845/GCA_001757845.1_ASM175784v1	-	GOE9
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.21743	36.7	chromosome:NZ_CP013695.1/CP013695.1	-	1	2339	2238	12/23/15	4/4/17	Chromosome	University of Illinois at Urbana-Champaign	SAMN04305174	GCA_001481635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/635/GCA_001481635.1_ASM148163v1	-	NG05B_CO5_07
Streptococcus sanguinis SK160	888812	PRJNA53165	53165	Terrabacteria group	Firmicutes	2.33387	43.3	-	AEXZ01	5	2303	2209	3/10/11	3/30/17	Scaffold	Baylor College of Medicine	SAMN00253316	GCA_000192275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/275/GCA_000192275.1_ASM19227v1	-	SK160
Staphylococcus saprophyticus	29385	PRJNA311173	311173	Terrabacteria group	Firmicutes	2.51324	33.1	-	LSLC01	35	2466	2309	5/25/16	4/5/17	Contig	Nofima	SAMN04479468	GCA_001651365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/365/GCA_001651365.1_ASM165136v1	27375578	MF6029
Vibrio sp. OY15	1440054	PRJNA255129	255129	Proteobacteria	Gammaproteobacteria	5.19891	44.5	-	JPIL01	45	4867	4675	8/20/14	4/9/17	Scaffold	UMBC	SAMN02910347	GCA_000742455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/455/GCA_000742455.1_ASM74245v1	25278542	OY15
Bacillus coagulans	1398	PRJNA272105	272105	Terrabacteria group	Firmicutes	3.31243	46.5	-	LRPN01	156	3294	3099	2/2/16	4/4/17	Scaffold	The Genome Institute at Washington University	SAMN03842165	GCA_001546215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/215/GCA_001546215.1_ASM154621v1	-	GED7749B
Petrimonas sp. IBARAKI	1978337	PRJDB4464	396695	FCB group	Bacteroidetes/Chlorobi group	3.68653	44	chromosome:AP018040.1	-	1	3045	2991	7/29/17	7/29/17	Complete Genome	Tokyo University of Agriculture and Technology	SAMD00078371	GCA_002356435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/435/GCA_002356435.1_ASM235643v1	-	IBARAKI
Leuconostoc citreum	33964	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.82335	39	-	JVUU01	37	1784	1686	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197274	GCA_001077275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/275/GCA_001077275.1_ASM107727v1	26230489	1301_LGAS
Yersinia mollaretii	33060	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.68214	49.6	-	CIFJ01	75	4337	4145	4/21/15	4/4/17	Scaffold	SC	SAMEA859874	GCA_001319605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/605/GCA_001319605.1_4821_6_11	-	92/84
Yersinia intermedia	631	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	5.02325	47.5	-	CPWY01	48	4739	4484	3/23/15	4/3/17	Scaffold	SC	SAMEA859947	GCA_001157385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/385/GCA_001157385.1_5139_5_8	-	Sep-85
Alteromonas sp. RW2A1	1917158	PRJNA352689	352689	Proteobacteria	Gammaproteobacteria	4.14382	44	chromosome:NZ_CP018031.1/CP018031.1	-	1	3647	3486	11/28/16	4/16/17	Complete Genome	University Miguel Hernandez	SAMN05992015	GCA_001886475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/475/GCA_001886475.1_ASM188647v1	-	RW2A1
Filimonas lacunae	477680	PRJDB4450	322824	FCB group	Bacteroidetes/Chlorobi group	7.8144	44	chromosome:AP017422.1	-	1	6448	6363	5/24/16	7/22/16	Complete Genome	"Life Science Reseach Center, College of Bioresource Sciences, Nihon University"	SAMD00045010	GCA_002355595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/595/GCA_002355595.1_F._lacunae_YT21-2	-	NBRC 104114
Propionibacterium freudenreichii	1744	PRJEB6429	270193	Terrabacteria group	Actinobacteria	2.578	67.4	-	CDAF01	47	2269	2123	3/21/15	4/4/17	Scaffold	INRA STLO	SAMEA2825571	GCA_001368955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/955/GCA_001368955.1_CIRM-BIA508	-	CIRM-BIA 508
Clostridium novyi A str. 4552	1444289	PRJNA233477	233477	Terrabacteria group	Firmicutes	2.79806	28.3	-	JENJ01	119	2640	2410	10/24/14	4/2/17	Contig	National Veterinary Institute (SVA)	SAMN02593763	GCA_000768605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/605/GCA_000768605.1_4552_1.0	-	4552
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.62934	67.2	-	LOTL01	105	6953	6617	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449147	GCA_001522005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/005/GCA_001522005.1_ASM152200v1	-	RF25-BP1
Streptococcus iniae	1346	PRJNA263021	263021	Terrabacteria group	Firmicutes	2.10384	36.5	-	LSNB01	148	2001	1740	3/21/16	4/5/17	Scaffold	"CIAD, A.C."	SAMN03093205	GCA_001595425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/425/GCA_001595425.1_ASM159542v1	-	CAIM 527
Lactobacillus paraplantarum	60520	PRJNA299444	299444	Terrabacteria group	Firmicutes	3.13973	44	chromosome:NZ_CP013130.1/CP013130.1	-	1	3046	2835	11/13/15	4/11/17	Complete Genome	Institute Of Microbiology Chinese Academy of Sciences	SAMN02893814	GCA_001443645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/443/645/GCA_001443645.1_ASM144364v1	-	L-ZS9
Campylobacter concisus ATCC 51562	1242969	PRJNA177556	177556	Proteobacteria	delta/epsilon subdivisions	1.84175	37.7	-	ANNI01	21	1873	1793	9/13/13	4/2/17	Contig	The University of New South Wales	SAMN02471191	GCA_000466745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/745/GCA_000466745.1_ATCC51562	23984967	ATCC 51562
Pseudomonas mendocina	300	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	5.15203	64	-	DDHQ01	39	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06453991	GCA_002353005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/005/GCA_002353005.1_ASM235300v1	28894102	-
Methanococcoides methylutens MM1	1434104	PRJNA230935	230935	Euryarchaeota	Methanomicrobia	2.39464	44	chromosome:NZ_CP009518.1/CP009518.1	-	1	2341	2245	4/7/15	4/10/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN03074571	GCA_000970325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/325/GCA_000970325.1_ASM97032v1	-	MM1
Finegoldia magna	1260	PRJNA383659	383659	Terrabacteria group	Firmicutes	1.9042	31.9	-	NDYI01	34	1850	1750	8/7/17	8/9/17	Contig	Aarhus University	SAMN06769902	GCA_002243075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/075/GCA_002243075.1_ASM224307v1	-	08T492
Lysinibacillus sphaericus	1421	PRJNA296399	296399	Terrabacteria group	Firmicutes	4.51213	37.5	-	LJYY01	84	4475	4350	10/5/15	4/4/17	Contig	University of Skovde	SAMN04097202	GCA_001306735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/735/GCA_001306735.1_ASM130673v1	26387925	B1-CDA
Flavobacterium psychrophilum	96345	PRJNA256261	256261	FCB group	Bacteroidetes/Chlorobi group	2.84841	32.5	chromosome:NZ_CP010274.2/CP010274.2	-	1	2560	2445	4/13/15	4/4/17	Chromosome	University of Copenhagen	SAMN02941920	GCA_000971575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/575/GCA_000971575.2_ASM97157v2	-	5
Clostridium butyricum 5521	447214	PRJNA20023	20023	Terrabacteria group	Firmicutes	4.5407	28.8	-	ABDT01	123	4072	3838	7/11/07	5/18/17	Contig	J. Craig Venter Institute	SAMN02436238	GCA_000171115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/115/GCA_000171115.1_ASM17111v1	24970833	5521
Akkermansia muciniphila	239935	PRJEB21068	396410	PVC group	Verrucomicrobia	2.80794	55.8	-	FXXT01	70	2447	2355	7/29/17	8/7/17	Contig	"WAGENINGEN UNIVERSITY, LABORATORY OF SYSTEMS AND SYNTHETIC BIOLOGY."	SAMEA104102610	GCA_900185065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/065/GCA_900185065.1_Pig.fasta	-	-
Rhodococcus erythropolis	1833	PRJNA238534	238534	Terrabacteria group	Actinobacteria	6.93788	62.4	-	JOIL01	160	6522	6300	7/2/14	4/2/17	Contig	University of Illinois	SAMN02645506	GCA_000719985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/985/GCA_000719985.1_ASM71998v1	-	NRRL B-16532
Lactobacillus johnsonii pf01	1037411	PRJNA67469	67469	Terrabacteria group	Firmicutes	1.8828	34.6	-	AFQJ01	5	1805	1664	6/28/11	3/30/17	Contig	chunlab.Inc	SAMN02469597	GCA_000219475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/475/GCA_000219475.2_ASM21947v2	21742886	pf01
Paenibacillus larvae	1464	PRJNA280999	280999	Terrabacteria group	Firmicutes	4.18511	44	-	LAWY01	139	4360	3917	5/5/15	4/3/17	Contig	"Center for Genomic Sciences, UNAM"	SAMN03481253	GCA_000988145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/145/GCA_000988145.1_ASM98814v1	26316636	MEX14
Lactobacillus sakei subsp. sakei DSM 20017 = JCM 1157	1423833	PRJDB642	243221	Terrabacteria group	Firmicutes	1.9082	41.1	-	BALW01	37	1922	1634	4/1/14	4/10/17	Contig	The University of Tokyo	SAMD00011898	GCA_000615365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/365/GCA_000615365.1_ASM61536v1	-	JCM 1157
Arcobacter butzleri L351	1447259	PRJNA233527	233527	Proteobacteria	delta/epsilon subdivisions	2.29024	27	-	JAIS01	95	2259	2167	5/19/15	4/3/17	Scaffold	Agriculture and Agri-Foods Canada	SAMN02581419	GCA_001010615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/615/GCA_001010615.1_A.butzleri_L351_1.0	25947176	L351
Xanthomonas albilineans	29447	PRJNA270159	270159	Proteobacteria	Gammaproteobacteria	3.7919	62.9	-	JZHY01	4	3234	2948	3/25/15	4/3/17	Contig	CIRAD	SAMN03263609	GCA_000963065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/065/GCA_000963065.1_Xal-GAB266-G1	-	GAB266
Mycobacterium intracellulare MIN_052511_1280	1335421	PRJNA203578	203578	Terrabacteria group	Actinobacteria	6.33171	67.6	-	JAON01	46	5938	5557	1/27/14	4/2/17	Contig	Institute for Genome Sciences	SAMN02641626	GCA_000524015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/015/GCA_000524015.1_ASM52401v1	-	MIN_052511_1280
Sorangium cellulosum	56	PRJNA237839	237839	Proteobacteria	delta/epsilon subdivisions	9.81365	71	-	JELY01	3728	7880	6279	3/11/16	3/11/16	Scaffold	Shandong University	SAMN02639824	GCA_001589265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/589/265/GCA_001589265.1_sce15725.1	-	So0157-25
Anoxybacillus flavithermus	33934	PRJNA314192	314192	Terrabacteria group	Firmicutes	2.56272	41.8	-	LUFB01	180	2782	2554	5/25/16	4/5/17	Scaffold	NIZO food research	SAMN04530316	GCA_001651525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/525/GCA_001651525.1_ASM165152v1	-	AF14
Edwardsiella tarda	636	PRJNA259400	259400	Proteobacteria	Gammaproteobacteria	3.82967	59.6	-	JRGQ01	167	3590	3410	12/18/14	4/2/17	Contig	East China University of Science and Technology	SAMN03004776	GCA_000804515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/515/GCA_000804515.1_ASM80451v1	25466920	ET883
Escherichia albertii	208962	PRJDB3047	301492	Proteobacteria	Gammaproteobacteria	4.86244	49.5	-	BBVE01	92	4946	4616	11/6/15	2/26/17	Scaffold	University of Miyazaki	SAMD00026624	GCA_001514555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/555/GCA_001514555.1_ASM151455v1	26537224	20H38
Caldicellulosiruptor bescii	31899	PRJEB19709	377501	Terrabacteria group	Firmicutes	2.95308	35.2	-	FUZJ01	3	2853	2634	3/9/17	3/18/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216512	GCA_900168085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/085/GCA_900168085.1_IMG-taxon_2667527208_annotated_assembly	-	MACB1018
Candidatus Liberibacter asiaticus	34021	PRJNA299501	299501	Proteobacteria	Alphaproteobacteria	1.20138	36.4	-	LMTO01	56	1109	1005	11/3/15	4/17/17	Contig	USDA-ARS	SAMN04209216	GCA_001430705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/430/705/GCA_001430705.1_ASM143070v1	26701083	-
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.73671	47.6	-	MDZK01	81	3434	3273	11/17/16	4/5/17	Contig	The University of Queensland	SAMN04320386	GCA_001880365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/365/GCA_001880365.1_ASM188036v1	-	88/3837
Streptococcus equinus	1335	PRJNA306242	306242	Terrabacteria group	Firmicutes	1.84936	37.8	-	LPVR01	5	1857	1602	12/23/15	4/4/17	Contig	Nestle Research Center and Nestle Institute of Health Sciences 	SAMN04348604	GCA_001481485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/485/GCA_001481485.1_ASM148148v1	26981577	ICDDRB-NRC-S6
Variovorax paradoxus	34073	PRJNA294421	294421	Proteobacteria	Betaproteobacteria	9.49063	69.2	-	LKTZ01	341	8860	8482	10/19/15	4/11/17	Contig	US EPA	SAMN04146768	GCA_001399555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/555/GCA_001399555.1_ASM139955v1	-	H112
Pectobacterium carotovorum subsp. brasiliense	180957	PRJNA269230	269230	Proteobacteria	Gammaproteobacteria	4.74014	52.1	-	JUJM01	17	4262	4086	12/29/14	4/2/17	Scaffold	Beijing Academy of Agriculture and Forestry Sciences	SAMN03252608	GCA_000808315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/315/GCA_000808315.1_ASM80831v1	-	YC T3
Mycobacterium kansasii 662	1299326	PRJNA191790	191790	Terrabacteria group	Actinobacteria	6.89616	66.2	-	JAOA01	53	6105	5470	1/27/14	4/2/17	Contig	Institute for Genome Sciences	SAMN02641606	GCA_000523615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/615/GCA_000523615.1_ASM52361v1	-	662
Teredinibacter turnerae T8602	1056817	PRJNA165355	165355	Proteobacteria	Gammaproteobacteria	5.09749	51	-	AQUT01	59	4218	4085	4/19/13	5/19/17	Contig	DOE Joint Genome Institute	SAMN02256509	GCA_000372325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/325/GCA_000372325.1_ASM37232v1	-	T8602
Brachyspira hyodysenteriae	159	PRJNA272555	272555	Spirochaetes	Spirochaetia	3.01369	27	-	JXNC01	143	2624	2494	5/26/15	4/3/17	Scaffold	Murdoch University	SAMN03283813	GCA_001012925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/925/GCA_001012925.1_ASM101292v1	26098837	NX
Dickeya zeae MS1	1308956	PRJNA194072	194072	Proteobacteria	Gammaproteobacteria	4.74828	53.3	-	APWM01	58	4305	4125	4/25/13	4/1/17	Contig	"Plant Protection Research Institute, Guangdong Academy of Agricultural Science, P. R. China"	SAMN01991085	GCA_000382585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/585/GCA_000382585.1_DiZ_MS1	23766402	MS1
Lactobacillus crispatus DSM 20584 = JCM 1185	1423736	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.05707	36.6	-	AZCW01	150	2023	1840	11/6/15	4/4/17	Scaffold	Shanghai Majorbio	SAMN02369387	GCA_001434005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/005/GCA_001434005.1_ASM143400v1	26415554	DSM 20584
Aggregatibacter actinomycetemcomitans RhAA1	1089447	PRJNA73527	73527	Proteobacteria	Gammaproteobacteria	2.23307	44.7	-	AHGR01	11	2236	2096	12/9/11	3/30/17	Contig	University of Medicine and Dentistry of New Jersey	SAMN02471881	GCA_000259915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/915/GCA_000259915.1_ASM25991v1	22328766	RhAA1
Rothia mucilaginosa	43675	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.27773	59.5	-	JVYQ01	33	1800	1711	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197174	GCA_001060545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/545/GCA_001060545.1_ASM106054v1	26230489	1211_RMUC
Streptomyces albus subsp. albus	67257	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.97807	71.7	-	JNWW01	94	7104	6822	7/1/14	3/9/17	Contig	University of Illinois	SAMN02645201	GCA_000716945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/945/GCA_000716945.1_ASM71694v1	-	NRRL B-16041
Streptococcus intermedius BA1	1248420	PRJNA178554	178554	Terrabacteria group	Firmicutes	1.96588	37.7	-	ANFT01	48	1975	1796	11/20/12	3/31/17	Contig	Institute for Genome Sciences	SAMN02222948	GCA_000313655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/655/GCA_000313655.1_contig	23405291	BA1
Lactobacillus jensenii IM59	1434655	PRJNA231005	231005	Terrabacteria group	Firmicutes	1.66774	34.2	-	AZRC01	65	1622	1528	5/22/15	4/3/17	Scaffold	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN02438381	GCA_001012675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/675/GCA_001012675.1_IM59v1	-	IM59
Lactobacillus ruminis DSM 20403 = NBRC 102161	1423798	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.00848	43.4	-	AYYL01	115	1997	1842	11/6/15	4/4/17	Contig	Shanghai Majorbio	SAMN02369384	GCA_001436475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/475/GCA_001436475.1_ASM143647v1	26415554	DSM 20403
Hydrogenobacter thermophilus TK-6	608538	PRJNA41547	41547	Aquificae	Aquificae	1.74293	44	chromosome:NC_017161.1/CP002221.1	-	1	1936	1872	10/15/10	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00191234	GCA_000164905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/905/GCA_000164905.1_ASM16490v1	21677850	TK-6
Gardnerella vaginalis JCP8481A	1261069	PRJNA181324	181324	Terrabacteria group	Actinobacteria	1.57288	42.9	-	ATJG01	149	1317	1172	6/25/13	4/10/17	Scaffold	Washington University	SAMN02436910	GCA_000414465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/465/GCA_000414465.1_ASM41446v1	-	JCP8481A
Rothia dentocariosa	2047	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.50405	53.7	-	JVLW01	47	2177	2051	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197506	GCA_001064485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/485/GCA_001064485.1_ASM106448v1	26230489	316_RDEN
Providencia alcalifaciens R90-1475	1256989	PRJNA181045	181045	Proteobacteria	Gammaproteobacteria	3.98784	41.7	-	JALC01	42	3761	3596	1/31/14	4/2/17	Contig	JCVI	SAMN02641580	GCA_000527315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/315/GCA_000527315.1_PalR901475v1.0	-	R90-1475
Bifidobacterium pseudocatenulatum	28026	PRJDB4597	325619	Terrabacteria group	Actinobacteria	2.3007	56.4	-	BCXZ01	43	1882	1761	6/10/16	4/5/17	Contig	Yakult Central Institute	SAMD00047610	GCA_001685985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/985/GCA_001685985.1_ASM168598v1	27340092	CA-B29
Providencia rettgeri	587	PRJNA283342	283342	Proteobacteria	Gammaproteobacteria	3.27364	42.4	-	LCVM01	697	3032	2132	6/5/15	6/5/15	Contig	"Junagadh Agricultural University, Junagadh"	SAMN03646990	GCA_001027325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/325/GCA_001027325.1_ASM102732v1	-	MR4
Hydrogenobacter thermophilus TK-6	608538	PRJDA34131	34131	Aquificae	Aquificae	1.74314	44	chromosome:NC_013799.1/AP011112.1	-	1	1937	1870	2/11/10	4/6/17	Complete Genome	The University of Tokyo	SAMD00060961	GCA_000010785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/785/GCA_000010785.1_ASM1078v1	20348262	TK-6
Staphylococcus hominis	1290	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.18965	31.3	-	JVVJ01	35	2140	2039	7/10/15	4/3/17	Contig	University of Washington	SAMN03197259	GCA_001069485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/485/GCA_001069485.1_ASM106948v1	26230489	1288_SEPI
Enterobacter cancerogenus	69218	PRJEB9821	382651	Proteobacteria	Gammaproteobacteria	4.87994	55.6	-	FYBA01	142	4719	4521	6/9/17	6/21/17	Contig	JUSTUS LIEBIG UNIVERSITY	SAMEA104113916	GCA_900185905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/905/GCA_900185905.1_ASM90018590v1	-	-
Staphylococcus capitis	29388	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.55353	32.8	-	JWAZ01	56	2440	2362	7/10/15	4/3/17	Contig	University of Washington	SAMN03197113	GCA_001062085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/085/GCA_001062085.1_ASM106208v1	26230489	1157_SAUR
Acinetobacter radioresistens	40216	PRJNA278502	278502	Proteobacteria	Gammaproteobacteria	3.17193	41.5	-	LATS01	42	3052	2912	4/14/15	4/3/17	Scaffold	Institut Pasteur de Paris	SAMN03456146	GCA_000972345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/345/GCA_000972345.1_ASM97234v1	26472823	CM38
Staphylococcus warneri	1292	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.59358	33.5	-	JVOH01	122	2497	2426	7/10/15	4/3/17	Contig	University of Washington	SAMN03197443	GCA_001071965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/965/GCA_001071965.1_ASM107196v1	26230489	252_SWAR
Eikenella corrodens	539	PRJNA310649	310649	Proteobacteria	Betaproteobacteria	2.19797	55.7	-	LXSJ01	55	2178	2042	5/19/16	4/5/17	Contig	Public Health Agency of Canada	SAMN04931634	GCA_001648335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/335/GCA_001648335.1_ASM164833v1	-	NML140207
Corynebacterium striatum	43770	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.83469	59.3	-	JULW01	141	2648	2462	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03198182	GCA_001059665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/665/GCA_001059665.1_ASM105966v1	26230489	962_CAUR
Rhodococcus hoagii	43767	PRJNA316970	316970	Terrabacteria group	Actinobacteria	5.14271	68.8	-	LXFG01	41	4757	4661	4/4/17	6/6/17	Contig	The University of Edinburgh	SAMN04910088	GCA_002078515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/515/GCA_002078515.1_ASM207851v1	27638249	PAM1600
Lactobacillus iners LEAF 2053A-b	879301	PRJNA52041	52041	Terrabacteria group	Firmicutes	1.36872	32.4	-	AEKH01	37	1304	1231	11/4/10	3/30/17	Contig	J. Craig Venter Institute	SAMN00115039	GCA_000179935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/935/GCA_000179935.1_ASM17993v1	-	LEAF 2053A-b
Bacillus atrophaeus Detrick-1	720556	PRJNA46077	46077	Terrabacteria group	Firmicutes	4.12808	43.1	-	AEFP01	31	4206	4003	4/19/11	6/15/17	Contig	Transformational Medical Technologies Program	SAMN01816418	GCA_000204725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/725/GCA_000204725.2_ASM20472v2	21464989	Detrick-1
Klebsiella variicola	244366	PRJNA201955	201955	Proteobacteria	Gammaproteobacteria	5.37999	57.4	-	AYIX01	3	5342	5084	10/30/13	7/24/17	Scaffold	Broad Institute	SAMN02138580	GCA_000492835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/835/GCA_000492835.1_Kleb_pneu_MGH_40_V1	-	MGH 40
Ruminococcus flavefaciens 007c	1341157	PRJNA206425	206425	Terrabacteria group	Firmicutes	3.64976	45.5	-	ATAX01	39	3225	3074	2/14/14	4/11/17	Contig	Weizmann Institute of Science	SAMN02952951	GCA_000571935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/935/GCA_000571935.1_Rf007c	24992679	007c
Acinetobacter nosocomialis 28F	1147131	PRJEB4504	222615	Proteobacteria	Gammaproteobacteria	4.19141	38.7	-	CBSD02	138	4121	3881	10/24/13	4/2/17	Contig	IBUN	SAMEA3138848	GCA_000529215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/215/GCA_000529215.1_ANIBUN_1	-	28F
Streptomyces griseus subsp. griseus	67263	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.10283	73.4	-	JOGN01	165	6224	5962	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645456	GCA_000719435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/435/GCA_000719435.1_ASM71943v1	-	NRRL F-5618
Streptococcus oralis	1303	PRJNA304333	304333	Terrabacteria group	Firmicutes	2.00129	41.5	-	LQNX01	29	1969	1809	3/2/16	4/5/17	Scaffold	University of Kaiserslautern	SAMN04325027	GCA_001578935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/935/GCA_001578935.1_ASM157893v1	27303717	DD15
Achromobacter xylosoxidans	85698	PRJNA287154	287154	Proteobacteria	Betaproteobacteria	6.30212	67.7	-	LFHA01	29	5770	5608	6/23/15	4/3/17	Contig	University Laval	SAMN03776898	GCA_001038045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/045/GCA_001038045.1_ASM103804v1	26227609	CF304
Butyrivibrio fibrisolvens 16/4	657324	PRJNA39147	39147	Terrabacteria group	Firmicutes	3.16439	38.6	chromosome:FP929036.1	-	1	2966	2904	3/25/10	2/27/15	Chromosome	MetaHIT	SAMEA3138350	GCA_000209815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/209/815/GCA_000209815.1_ASM20981v1	-	16/4
Bacteroides xylanisolvens	371601	PRJEB17489	351662	FCB group	Bacteroidetes/Chlorobi group	5.86794	41.9	-	FOUM01	93	4749	4512	10/31/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216250	GCA_900114865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/865/GCA_900114865.1_IMG-taxon_2654588180_annotated_assembly	-	NLAE-zl-C202
Xanthomonas fuscans subsp. fuscans	366649	PRJNA264775	264775	Proteobacteria	Gammaproteobacteria	5.03295	64.8	-	JSBR02	134	4516	4047	10/30/14	4/3/17	Contig	University of Exeter	SAMN03142402	GCA_000775185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/185/GCA_000775185.2_NCPPB1654v2	26500625	NCPPB 1654
Pseudomonas syringae pv. ribicola	55398	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.89284	59.4	-	LJRF01	219	5343	5171	10/20/15	4/4/17	Scaffold	University of Toronto	SAMN03976257	GCA_001400955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/955/GCA_001400955.1_PriICMP3882	-	ICMP3882
Pseudomonas savastanoi pv. glycinea str. B076	875329	PRJNA51517	51517	Proteobacteria	Gammaproteobacteria	6.23665	57.8	-	AEGG01	104	6000	5410	1/28/11	5/19/17	Contig	University of Illinois at Urbana & Champaign	SAMN02471826	GCA_000187045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/045/GCA_000187045.2_ASM18704v2	21304594	B076
Pseudomonas coronafaciens pv. oryzae str. 1_6	563797	PRJNA31357	31357	Proteobacteria	Gammaproteobacteria	6.77886	57.3	-	ABZR01	2109	7893	7837	11/18/08	1/8/14	Scaffold	University of North Carolina at Chapel Hill	SAMN02471317	GCA_000156995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/995/GCA_000156995.1_ASM15699v1	19015323	1_6
Acinetobacter calcoaceticus	471	PRJNA247596	247596	Proteobacteria	Gammaproteobacteria	3.95171	38.7	-	JQLC01	66	3884	3620	8/28/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02787121	GCA_000746375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/375/GCA_000746375.1_ASM74637v1	-	WP19
Acinetobacter johnsonii	40214	PRJNA315996	315996	Proteobacteria	Gammaproteobacteria	3.79907	41.4	-	LVIB01	154	3794	3462	4/26/16	4/5/17	Contig	CSUF	SAMN04572947	GCA_001632325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/325/GCA_001632325.1_ASM163232v1	-	Aj2199
Acinetobacter junii	40215	PRJNA270280	270280	Proteobacteria	Gammaproteobacteria	3.19981	38.7	-	JWJT01	144	3074	2877	1/2/15	4/2/17	Contig	University of Malaya	SAMN03265388	GCA_000813495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/495/GCA_000813495.1_ASM81349v1	-	L20
Pseudoalteromonas sp. P1-30	1723760	PRJNA294442	294442	Proteobacteria	Gammaproteobacteria	4.33728	40.9	-	LKBC01	35	3869	3771	10/20/15	8/28/17	Scaffold	Hans Knoell Institute	SAMN04027325	GCA_001400005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/005/GCA_001400005.1_ASM140000v1	26659670	P1-30
Acinetobacter lwoffii NCTC 5866 = CIP 64.10 = NIPH 512	981327	PRJNA62417	62417	Proteobacteria	Gammaproteobacteria	3.35313	43	-	AIEL01	252	3338	2937	2/21/12	3/30/17	Contig	University of Birmingham	SAMN02471600	GCA_000248355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/355/GCA_000248355.2_ASM24835v2	23259572	NCTC 5866
Vibrio fluvialis	676	PRJNA300397	300397	Proteobacteria	Gammaproteobacteria	4.9409	46.7	-	LMTE01	49	4708	4443	12/7/16	4/6/17	Scaffold	Exeter University	SAMN04221178	GCA_001890655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/655/GCA_001890655.1_ASM189065v1	-	NCTC 11327
Pantoea stewartii	66269	PRJNA278253	278253	Proteobacteria	Gammaproteobacteria	4.79039	53.7	-	LDSK01	76	4479	4294	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401418	GCA_001476375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/375/GCA_001476375.1_ASM147637v1	26793183	RSA36
Cylindrospermopsis raciborskii CYRF	2021698	PRJNA395050	395050	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.15005	40	-	NPIL01	166	-	-	9/21/17	9/21/17	Scaffold	Universidade Federal do Rio de Janeiro	SAMN07370489	GCA_002321945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/945/GCA_002321945.1_ASM232194v1	-	CYRF
Geobacillus sp. Y4.1MC1	581103	PRJNA33183	33183	Terrabacteria group	Firmicutes	3.91195	43.9963	chromosome:NC_014650.1/CP002293.1; plasmid pGY4MC101:NC_014651.1/CP002294.1	-	2	3999	3687	11/5/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002562	GCA_000166075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/075/GCA_000166075.1_ASM16607v1	-	Y4.1MC1
Pediococcus acidilactici MA18/5M	1080365	PRJNA72773	72773	Terrabacteria group	Firmicutes	1.98958	42.1	-	AGKB01	10	1931	1804	11/18/11	3/30/17	Contig	Institut Rosell Lallemand Inc.	SAMN02469945	GCA_000235805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/805/GCA_000235805.2_ASM23580v2	22275099	MA18/5M
Parageobacillus thermoglucosidasius C56-YS93	634956	PRJNA40781	40781	Terrabacteria group	Firmicutes	3.99379	43.9823	chromosome:NC_015660.1/CP002835.1; plasmid pGEOTH01:NC_015665.1/CP002836.1; plasmid pGEOTH02:NC_015661.1/CP002837.1	-	3	4091	3741	6/10/11	9/4/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02232024	GCA_000178395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/395/GCA_000178395.2_ASM17839v2	26442136	C56-YS93
Vibrio mimicus	674	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.43191	46.2	-	LOSJ01	2	4248	3854	12/21/15	4/4/17	Contig	US Food and Drug Administration 	SAMN03996329	GCA_001471395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/395/GCA_001471395.1_ASM147139v1	-	ATCC 33655
Vibrio coralliilyticus	190893	PRJNA242743	242743	Proteobacteria	Gammaproteobacteria	5.43392	45.7	-	JXXR01	60	5023	4904	4/1/15	4/3/17	Contig	Technical University of Denmark	SAMN03323806	GCA_000967465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/465/GCA_000967465.1_S2052	25879706	S2052
Parageobacillus thermoglucosidans	1426	PRJNA314192	314192	Terrabacteria group	Firmicutes	3.69646	43.8	-	LUCT01	52	3747	3541	5/25/16	4/5/17	Scaffold	NIZO food research	SAMN04532072	GCA_001651535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/535/GCA_001651535.1_ASM165153v1	-	GT23
Enterobacter asburiae C1	1442602	PRJNA232953	232953	Proteobacteria	Gammaproteobacteria	4.88244	55.8	-	JACW01	75	4749	4548	2/10/14	4/2/17	Contig	UNIVERSITY OF MALAYA	SAMN02567292	GCA_000568175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/175/GCA_000568175.1_De_novo_Assembly	-	C1
Brucella sp. 63/311	1160235	PRJNA173581	173581	Proteobacteria	Alphaproteobacteria	3.35378	57.2	-	AQKQ01	19	3400	3130	4/16/13	4/8/17	Scaffold	Broad Institute	SAMN00811223	GCA_000370945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/945/GCA_000370945.1_Bruc_sp_63_311_V1	-	63/311
Pseudomonas amygdali	47877	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.93478	58.2	-	LJPQ01	222	5528	5131	10/20/15	4/4/17	Scaffold	University of Toronto	SAMN03976261	GCA_001400115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/115/GCA_001400115.1_PamICMP3918	-	ICMP3918
Xanthomonas euvesicatoria	456327	PRJNA275508	275508	Proteobacteria	Gammaproteobacteria	5.31933	64.5	-	JZRW01	102	4805	4386	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03349345	GCA_001009175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/175/GCA_001009175.1_ASM100917v1	-	H3-2
Acinetobacter pittii ANC 4052	1217689	PRJNA183267	183267	Proteobacteria	Gammaproteobacteria	3.95339	38.8	-	APQO01	5	3781	3617	5/16/13	4/1/17	Scaffold	Broad Institute	SAMN01828155	GCA_000399705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/705/GCA_000399705.1_Acin_pitt_ANC_4052_V1	-	ANC 4052
Bacillus cytotoxicus	580165	PRJNA394959	394959	Terrabacteria group	Firmicutes	4.38936	35.9	-	NOKJ01	3	4591	4119	8/14/17	8/16/17	Contig	University of Zurich	SAMN07367956	GCA_002251045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/045/GCA_002251045.1_ASM225104v1	-	CH_2
Vibrio tritonius	1435069	PRJDB3095	295458	Proteobacteria	Gammaproteobacteria	5.22193	43.9316	chromosome 1:NZ_AP014635.1/AP014635.1; chromosome Unknown:NZ_AP014636.1/AP014636.1	-	2	4675	4470	9/11/15	4/11/17	Complete Genome	Hokkaido University	SAMD00019582	GCA_001547935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/935/GCA_001547935.1_ASM154793v1	-	JCM 16456
Staphylococcus lugdunensis	28035	PRJNA382353	382353	Terrabacteria group	Firmicutes	2.54616	33.7	chromosome:NZ_CP020762.1/CP020762.1	-	1	2437	2344	4/18/17	5/1/17	Chromosome	EA7290	SAMN06704636	GCA_002096115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/115/GCA_002096115.1_ASM209611v1	-	VISLISI_21
Streptococcus constellatus	76860	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.04327	37.9	-	JUNJ01	124	2037	1893	7/10/15	4/3/17	Contig	University of Washington	SAMN03198143	GCA_001075725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/725/GCA_001075725.1_ASM107572v1	26230489	925_SCON
Streptococcus anginosus F0211	706437	PRJNA43129	43129	Terrabacteria group	Firmicutes	1.99371	38.4	-	AECT01	63	1917	1812	12/17/10	3/30/17	Contig	Washington University Genome Center	SAMN00189158	GCA_000184365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/184/365/GCA_000184365.2_ASM18436v1	-	F0211
Pantoea ananatis LMG 2665	1378093	PRJNA240762	240762	Proteobacteria	Gammaproteobacteria	4.98049	53.4	-	JFZU01	27	4705	4486	5/1/14	4/2/17	Scaffold	Agriculture and Agri-Food Canada	SAMN02680126	GCA_000661975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/975/GCA_000661975.1_Pantoea_ananatis_LMG_2665	24855311	LMG 2665
Bacillus sp. MD-5	2009331	PRJNA389650	389650	Terrabacteria group	Firmicutes	4.16145	43.9	chromosome:NZ_CP021911.1/CP021911.1	-	1	4256	4034	6/20/17	6/22/17	Complete Genome	"Third Institute of Oceanography, State Oceanic Administration"	SAMN07204494	GCA_002201875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/875/GCA_002201875.1_ASM220187v1	-	MD-5
Acinetobacter haemolyticus	29430	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.34895	39.5	-	BBSE01	140	3199	3060	1/23/15	4/3/17	Contig	National Institute of Technology and Evaluation	SAMD00019878	GCA_000830135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/135/GCA_000830135.1_ASM83013v1	-	NBRC 109758
Lysinibacillus fusiformis	28031	PRJNA348753	348753	Terrabacteria group	Firmicutes	4.47054	37.4	-	DDAI01	33	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457247	GCA_002332565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/565/GCA_002332565.1_ASM233256v1	28894102	-
Streptococcus gallolyticus	315405	PRJEB5536	248582	Terrabacteria group	Firmicutes	2.63907	37.4	-	CCBC01	260	2662	2284	5/25/14	4/11/17	Contig	ERA7	SAMEA3139057	GCA_000723985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/985/GCA_000723985.1_SGAL	-	LMG17956
Mycoplasma ovipneumoniae SC01	997765	PRJNA63641	63641	Terrabacteria group	Tenericutes	1.0202	28.9	-	AFHO01	37	755	676	6/15/11	3/30/17	Contig	Beijing Genome Institute	SAMN02471008	GCA_000218525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/525/GCA_000218525.2_ASM21852v2	21742877	SC01
Taylorella equigenitalis	29575	PRJNA261870	261870	Proteobacteria	Betaproteobacteria	1.668	37.4	-	JRMO01	26	1565	1456	10/7/14	4/9/17	Contig	"Anses, Dozule Laboratory for Equine Diseases"	SAMN03078798	GCA_000764465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/465/GCA_000764465.1_ASM76446v1	25428969	MCE529
Leptospira santarosai str. HAI134	1049980	PRJNA74151	74151	Spirochaetes	Spirochaetia	4.05621	41.6	-	AHOH02	48	4086	3732	1/24/12	4/1/17	Contig	J. Craig Venter Institute	SAMN02436418	GCA_000244615.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/615/GCA_000244615.3_gls454168v2.0	-	HAI134
Citrobacter freundii	546	PRJNA357667	357667	Proteobacteria	Gammaproteobacteria	5.09812	52.1	chromosome:NZ_CP018810.1/CP018810.1	-	1	4870	4567	12/27/16	4/6/17	Chromosome	South china agricultural university	SAMN06158407	GCA_001922445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/445/GCA_001922445.1_ASM192244v1	-	BD
[Clostridium] clostridioforme 90A1	999403	PRJNA64857	64857	Terrabacteria group	Firmicutes	5.80603	48.7	-	AGYP01	16	5789	5467	4/19/13	5/19/17	Scaffold	Broad Institute	SAMN02596766	GCA_000371605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/605/GCA_000371605.1_Clos_clos_90A1_V1	-	90A1
Fusobacterium necrophorum BFTR-2	1441736	PRJNA232681	232681	Fusobacteria	Fusobacteriia	2.60849	33.8	-	JAAG01	389	2530	2260	5/15/14	4/2/17	Contig	"Newport Laboratories, A Sanofi company"	SAMN02781282	GCA_000691725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/725/GCA_000691725.1_FnecBFTR-2v1.0	-	BFTR-2
Streptococcus parasanguinis	1318	PRJNA274768	274768	Terrabacteria group	Firmicutes	2.14997	41.6	-	JYPA01	20	2104	1975	3/25/15	4/3/17	Contig	University at Buffalo	SAMN03334910	GCA_000963285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/285/GCA_000963285.1_ASM96328v1	25999552	VT517
Agrobacterium sp. 33MFTa1.1	1279031	PRJNA185343	185343	Proteobacteria	Alphaproteobacteria	5.30466	59.2	-	JNIC01	15	5109	4927	6/11/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02841138	GCA_000702405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/405/GCA_000702405.1_ASM70240v1	-	33MFTa1.1
Haemophilus parainfluenzae	729	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	2.11161	39.3	-	JVFE01	70	2010	1929	7/10/15	4/3/17	Contig	University of Washington	SAMN03197680	GCA_001057005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/005/GCA_001057005.1_ASM105700v1	26230489	488_HPAR
Streptococcus infantis SK970	1035189	PRJNA67191	67191	Terrabacteria group	Firmicutes	1.94561	39.4	-	AFUT01	9	2217	2144	8/10/11	9/20/13	Contig	J. Craig Venter Institute	SAMN00621709	GCA_000223255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/223/255/GCA_000223255.2_ASM22325v2	-	SK970
Actinomyces oris	544580	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.27886	68.1	-	MSKO01	103	2763	2569	1/5/17	4/6/17	Scaffold	King's College London	SAMN05898726	GCA_001937425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/425/GCA_001937425.1_ASM193742v1	-	F28B1
Enterobacter hormaechei ATCC 49162	888063	PRJNA53031	53031	Proteobacteria	Gammaproteobacteria	4.861	55.2	-	AFHR01	14	4709	4515	5/18/11	3/22/17	Scaffold	Baylor College of Medicine	SAMN00259689	GCA_000213995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/995/GCA_000213995.1_ASM21399v1	-	ATCC 49162
Bacillus subtilis	1423	PRJNA326460	326460	Terrabacteria group	Firmicutes	4.10829	43.9	chromosome:NZ_CP018173.1/CP018173.1	-	1	4215	3982	12/6/16	3/28/17	Complete Genome	Shiraz University	SAMN05231882	GCA_001889625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/625/GCA_001889625.1_ASM188962v1	-	MJ01
Sinorhizobium fredii CCBAU 83622	1128332	PRJNA77219	77219	Proteobacteria	Alphaproteobacteria	6.56775	62.3	-	AJQP01	401	6525	5888	5/3/12	5/19/17	Contig	China Agricultural University	SAMN02469480	GCA_000261905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/905/GCA_000261905.1_83622	22586130	CCBAU 83622
Mycoplasma hominis	2098	PRJNA277342	277342	Terrabacteria group	Tenericutes	0.679518	26.9	-	JRWZ01	11	605	551	3/2/15	4/3/17	Contig	Vaginal Microbiome Consortium	SAMN03083653	GCA_000935875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/875/GCA_000935875.1_ASM93587v1	-	AF3
Myroides odoratimimus	76832	PRJDB4325	301001	FCB group	Bacteroidetes/Chlorobi group	4.24076	33.9	-	BCMQ01	65	3810	3650	11/25/15	4/5/17	Contig	Shandong University	SAMD00042711	GCA_001485415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/415/GCA_001485415.1_ASM148541v1	-	CCUG39352
Sphingobium yanoikuyae	13690	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	4.9335	64.7	-	DCYZ01	71	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454937	GCA_002331795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/795/GCA_002331795.1_ASM233179v1	28894102	-
Streptococcus parauberis	1348	PRJNA273857	273857	Terrabacteria group	Firmicutes	1.97583	35.5	-	LHAC01	14	2021	1909	3/29/16	4/5/17	Contig	Norfolk State University	SAMN03856837	GCA_001601925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/925/GCA_001601925.1_Spar_N198_2_V1S1	-	N198_2
Leuconostoc lactis KCTC 3528 = DSM 20202	935294	PRJNA61103	61103	Terrabacteria group	Firmicutes	2.0112	42.6	-	AEOR01	1151	-	-	1/5/11	1/8/14	Contig	Korea Research Institute of Bioscience and Biotechnology	SAMN02470182	GCA_000185085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/085/GCA_000185085.2_ASM18508v1	-	KCTC 3528
Kingella kingae BB016	1305793	PRJEB1648	194483	Proteobacteria	Betaproteobacteria	1.99312	46.6	-	CBRB01	1	1932	1671	8/15/13	4/1/17	Scaffold	URMITE	SAMEA2271962	GCA_000469885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/885/GCA_000469885.1_BB016	-	BB016
Streptococcus pseudopneumoniae	257758	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.12347	40	-	JVWB01	89	2153	1999	7/10/15	4/3/17	Contig	University of Washington	SAMN03197241	GCA_001069475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/475/GCA_001069475.1_ASM106947v1	26230489	1271.rep2_SPSE
Streptococcus cristatus	45634	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.43395	42.9	-	JVCN01	31	2403	2298	7/10/15	4/3/17	Contig	University of Washington	SAMN03197749	GCA_001073285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/285/GCA_001073285.1_ASM107328v1	26230489	550_SOLI
Weissella cibaria	137591	PRJNA383151	383151	Terrabacteria group	Firmicutes	2.46561	45	-	NDXJ01	34	2338	2187	4/28/17	5/3/17	Contig	Brigham Young University	SAMN06759976	GCA_002115575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/575/GCA_002115575.1_ASM211557v1	-	DmW_103
Xanthomonas perforans	442694	PRJNA276632	276632	Proteobacteria	Gammaproteobacteria	5.43992	64.4	-	JZVK01	109	4970	4587	5/18/15	4/3/17	Contig	Universidade de Sao Paulo	SAMN03379150	GCA_001009475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/475/GCA_001009475.1_v1	26089818	GEV839
Aeromonas caviae	648	PRJNA287226	287226	Proteobacteria	Gammaproteobacteria	4.52123	61.3	-	LFXO01	143	4245	3993	7/21/15	4/3/17	Scaffold	The Hong Kong Polytechnic University	SAMN03778994	GCA_001183595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/595/GCA_001183595.1_ASM118359v1	-	A23
Streptobacillus moniliformis	34105	PRJNA319313	319313	Fusobacteria	Fusobacteriia	1.68349	26	-	LXKI01	286	1530	1402	6/3/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04892887	GCA_001655895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/895/GCA_001655895.1_ASM165589v1	-	Marseille
Klebsiella aerogenes UCI 47	1400144	PRJNA219299	219299	Proteobacteria	Gammaproteobacteria	5.26635	55	-	JCKN01	4	5145	4898	2/3/14	4/6/17	Scaffold	Broad Institute	SAMN02356627	GCA_000534095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/095/GCA_000534095.1_Ente_aero_UCI_47_V1	-	UCI 47
Leuconostoc pseudomesenteroides	33968	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.95205	39.1	-	MPAR01	83	1978	1816	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981468	GCA_002092035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/035/GCA_002092035.1_ASM209203v1	28217118	LMGCF06
Xanthomonas gardneri	90270	PRJNA276589	276589	Proteobacteria	Gammaproteobacteria	5.30807	63.5	-	JZJS01	200	4646	4312	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03378824	GCA_001009535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/535/GCA_001009535.1_ASM100953v1	26089818	SM177-10
Psychrobacter sp. AntiMn-1	1720344	PRJNA296583	296583	Proteobacteria	Gammaproteobacteria	3.13812	43.9	chromosome:NZ_CP012969.1/CP012969.1	-	1	2702	2545	10/26/16	4/13/17	Complete Genome	Zhejiang Wanli University	SAMN04098990	GCA_001854065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/065/GCA_001854065.1_ASM185406v1	-	AntiMn-1
Chlamydia pecorum	85991	PRJNA269190	269190	PVC group	Chlamydiae	1.1064	41.1	-	JWHE01	2	989	938	12/15/15	4/4/17	Contig	University of the Sunshine Coast	SAMN03253048	GCA_001466415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/415/GCA_001466415.1_ASM146641v1	-	NSW/Bov/SBE
Aeromonas veronii	654	PRJNA260226	260226	Proteobacteria	Gammaproteobacteria	4.54266	58.8	-	JRBE01	63	4147	3998	9/16/14	4/2/17	Contig	Osaka Ohtani University	SAMN03018688	GCA_000754905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/905/GCA_000754905.1_ASM75490v1	25359918	ARB3
Burkholderia gladioli	28095	PRJNA286078	286078	Proteobacteria	Betaproteobacteria	8.0206	68.1	-	LEKY01	155	6922	6464	6/16/15	4/10/17	Contig	National Institute of Plant Genome Research	SAMN03764558	GCA_001028765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/765/GCA_001028765.1_Bg1.0	26205861	NGJ1
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.01942	64.2	-	FVBZ01	24	5057	4868	3/10/17	3/18/17	Contig	SC	SAMEA2070831	GCA_900130485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/485/GCA_900130485.1_10665_3_1	-	171
Leptospira weilii	28184	PRJNA257145	257145	Spirochaetes	Spirochaetia	4.32538	40.7	-	JQRR01	365	4285	3905	2/24/16	4/5/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947791	GCA_001568415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/415/GCA_001568415.1_ASM156841v1	26833181	56646
Leptospira noguchii str. Hook	1193055	PRJNA167239	167239	Spirochaetes	Spirochaetia	4.5454	35.6	-	AOUC01	300	4112	3655	4/3/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01162022	GCA_000350605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/605/GCA_000350605.1_gls454074v01	-	Hook
Pseudomonas brassicacearum	930166	PRJNA248703	248703	Proteobacteria	Gammaproteobacteria	6.21787	60.1	-	JNCR01	111	5642	5449	6/2/15	4/3/17	Contig	Lanzhou University	SAMN02800876	GCA_001017815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/815/GCA_001017815.1_ASM101781v1	-	LZ-4
Gallibacterium anatis	750	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.49844	39.6	-	JPXP01	92	2403	2263	11/4/14	4/2/17	Contig	University of Copenhagen	SAMN02900754	GCA_000771915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/915/GCA_000771915.1_ASM77191v1	-	36961/Sv7
Haemophilus haemolyticus	726	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	1.94181	38.3	-	LZDL01	31	1895	1782	7/5/16	4/5/17	Contig	TAILORED-Treatment project	SAMN05214003	GCA_001679135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/135/GCA_001679135.1_ASM167913v1	-	CCUG 24149
Melissococcus plutonius	33970	PRJNA263537	263537	Terrabacteria group	Firmicutes	2.04585	31.1	-	JSAV01	15	1813	1588	7/7/15	4/3/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03103704	GCA_001047465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/465/GCA_001047465.1_ASM104746v1	-	764-5B
Mycobacterium colombiense	339268	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.72244	67.4	-	LZKZ01	411	5624	5063	6/17/16	4/10/17	Contig	JCVI	SAMN04634154	GCA_001673075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/075/GCA_001673075.1_ASM167307v1	-	1245829.5
Mycobacterium africanum MAL010074	1354164	PRJNA211633	211633	Terrabacteria group	Actinobacteria	4.40081	65.5	-	JLAX01	4	4291	4065	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02231102	GCA_000666225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/225/GCA_000666225.1_Myco_afri_MAL010074_V1	-	MAL010074
Pantoea agglomerans 299R	1261128	PRJNA181162	181162	Proteobacteria	Gammaproteobacteria	4.58148	54.3	-	ANKX01	109	4377	4164	1/2/13	5/19/17	Contig	"University of California, Davis"	SAMN02471652	GCA_000330765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/765/GCA_000330765.1_299R_EBK	-	299R
Mycobacterium canettii CIPT 140070007	1246634	PRJEB587	184400	Terrabacteria group	Actinobacteria	4.41432	65.5	-	CAOO01	502	4351	4012	12/19/12	5/19/17	Contig	Institut Pasteur	SAMEA2272657	GCA_000343935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/935/GCA_000343935.1_ASM34393v1	23291586	CIPT 140070007
Vibrio nigripulchritudo BLFn1	1238431	PRJEB552	222438	Proteobacteria	Gammaproteobacteria	6.40836	45.8	-	CANU01	120	5739	5643	10/1/13	4/3/17	Contig	Genoscope CEA	SAMEA3146331	GCA_001050615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/615/GCA_001050615.1_ASM105061v1	23739050	BLFn1
Burkholderia cepacia	292	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	8.61359	66.5795	chromosome 1:CP023518.1; chromosome 2:CP023521.1; chromosome 3:CP023520.1; plasmid unnamed2:CP023519.1	-	5	8037	7597	9/28/17	9/28/17	Chromosome	US Food and Drug Administration 	SAMN07312432	GCA_002407525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/407/525/GCA_002407525.1_ASM240752v1	-	FDAARGOS_388
Enterococcus hirae	1354	PRJNA270385	270385	Terrabacteria group	Firmicutes	2.83764	36.7	-	JXKR01	81	2678	2552	11/25/16	4/6/17	Contig	Inner Mongolia Agricultural University	SAMN03267174	GCA_001885955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/955/GCA_001885955.1_ASM188595v1	-	DSM 20160
Hafnia alvei	569	PRJNA236111	236111	Proteobacteria	Gammaproteobacteria	4.66714	49	-	LAZF01	89	4337	4198	4/24/15	4/3/17	Contig	University of Malaya	SAMN03466600	GCA_000980985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/985/GCA_000980985.1_ASM98098v1	-	LE8
Selenomonas ruminantium	971	PRJEB17101	351347	Terrabacteria group	Firmicutes	3.3001	49.3	-	FOJX01	24	3240	3101	10/31/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216587	GCA_900111915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/915/GCA_900111915.1_IMG-taxon_2654588115_annotated_assembly	-	L14
Lactobacillus curvatus	28038	PRJNA265031	265031	Terrabacteria group	Firmicutes	1.94491	41.8	-	JTJV01	144	1984	1831	12/19/14	4/2/17	Contig	University College Cork	SAMN03145063	GCA_000805355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/355/GCA_000805355.1_ASM80535v1	25501479	NRIC0822
Staphylococcus sciuri	1296	PRJNA278196	278196	Terrabacteria group	Firmicutes	2.87857	32.4	-	LDTL01	136	2917	2783	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401360	GCA_001477395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/395/GCA_001477395.1_ASM147739v1	26793183	NS112
Agrobacterium rhizogenes	359	PRJNA247546	247546	Proteobacteria	Alphaproteobacteria	6.66291	60.1	-	JUGS01	16	6291	6148	12/9/14	4/2/17	Contig	DOE Joint Genome Institute	SAMN02787053	GCA_000800035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/035/GCA_000800035.1_ASM80003v1	-	CF262
Acidithiobacillus thiooxidans	930	PRJNA319307	319307	Proteobacteria	Acidithiobacillia	3.94685	52.9	-	LWRY01	319	4229	3833	8/16/16	4/5/17	Contig	Central South University	SAMN04884741	GCA_001705805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/805/GCA_001705805.1_ASM170580v1	27548157	DXS-W
Morganella morganii	582	PRJNA258045	258045	Proteobacteria	Gammaproteobacteria	3.67312	51.2	-	JQGP01	93	3428	3300	9/2/14	4/2/17	Contig	University of Malaya	SAMN02983093	GCA_000747035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/035/GCA_000747035.1_ASM74703v1	-	340
Streptococcus sobrinus TCI-54	1074058	PRJNA71885	71885	Terrabacteria group	Firmicutes	2.08876	43.5	-	AGGH01	422	2146	1861	10/6/11	3/30/17	Contig	JCVI	SAMN02436618	GCA_000227905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/905/GCA_000227905.2_SMUT1-NEX_7-54	-	TCI-54
Cutibacterium avidum	33010	PRJNA298218	298218	Terrabacteria group	Actinobacteria	2.52207	63.4	-	LLJI01	9	2345	2194	11/4/16	4/5/17	Contig	Aarhus University	SAMN04156672	GCA_001866625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/625/GCA_001866625.1_ASM186662v1	27355425	T14
Geobacillus sp. A8	1095383	PRJNA213133	213133	Terrabacteria group	Firmicutes	3.34831	52.4	-	AUXP01	173	3495	3125	8/15/13	4/8/17	Contig	University of the Free State	SAMN02258452	GCA_000447395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/395/GCA_000447395.1_GA8_Ver1	-	A8
Prevotella intermedia ZT	1347790	PRJNA208776	208776	FCB group	Bacteroidetes/Chlorobi group	2.79034	43.3	-	ATMK01	168	2487	2343	3/17/15	4/3/17	Contig	"Bio-X Institutes, Shanghai Jiao Tong University"	SAMN02212661	GCA_000955645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/955/645/GCA_000955645.1_PiZT	25765460	ZT
Actinomyces naeslundii	1655	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.19197	67.6	-	MSRH01	73	2722	2540	1/18/17	4/6/17	Scaffold	King's College London	SAMN05898711	GCA_001956355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/355/GCA_001956355.1_ASM195635v1	-	F12B1
Clostridium pasteurianum	1501	PRJNA288884	288884	Terrabacteria group	Firmicutes	4.26547	29.8	-	LFYL01	14	3977	3389	1/23/17	4/6/17	Contig	University of Cincinnati	SAMN03839332	GCA_001968885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/968/885/GCA_001968885.1_ASM196888v1	-	W5
Mycobacterium chelonae	1774	PRJNA347845	347845	Terrabacteria group	Actinobacteria	5.14201	63.9	-	MLIE01	16	5070	4924	10/26/16	4/5/17	Contig	University of Georgia	SAMN05897986	GCA_001853685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/685/GCA_001853685.1_ASM185368v1	-	B3_S15
Vibrio campbellii	680	PRJDB3039	271954	Proteobacteria	Gammaproteobacteria	5.7364	45.4	-	BBKU01	219	5334	5105	1/7/15	4/2/17	Scaffold	University of Miyazaki	SAMD00019130	GCA_000818295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/295/GCA_000818295.1_ASM81829v1	25527835	051011E
Staphylococcus xylosus	1288	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.82021	32.7	-	LNPS01	41	2637	2568	9/28/16	4/5/17	Contig	Tufts University	SAMN04244267	GCA_001747735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/735/GCA_001747735.1_ASM174773v1	-	CJH_74
Bacillus subtilis	1423	PRJNA348796	348796	Terrabacteria group	Firmicutes	4.01382	43.9	chromosome:NZ_CP017676.1/CP017676.1	-	1	4092	3877	10/21/16	3/28/17	Complete Genome	King Saud University	SAMN05915708	GCA_001808235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/235/GCA_001808235.1_ASM180823v1	-	VV2
Anaerostipes hadrus	649756	PRJNA45957	45957	Terrabacteria group	Firmicutes	3.11479	37.2	chromosome:FP929061.1	-	1	2826	2771	3/25/10	4/21/16	Chromosome	metaHIT	SAMEA3138376	GCA_000210695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/695/GCA_000210695.1_ASM21069v1	-	SSC/2
Flavonifractor plautii	292800	PRJEB10915	297013	Terrabacteria group	Firmicutes	7.42676	60	-	CZAT01	135	7073	6975	10/1/15	5/19/16	Contig	SC	SAMEA3545369	GCA_001405435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/435/GCA_001405435.1_14207_7_29	-	2789STDY5834906
Bacillus simplex	1478	PRJEB18866	360723	Terrabacteria group	Firmicutes	6.07895	40	-	FTMX01	32	5815	5590	1/14/17	4/6/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05878482	GCA_900156045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/045/GCA_900156045.1_IMG-taxon_2708742464_annotated_assembly	-	RUG2-6
Leclercia adecarboxylata	83655	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.70638	55.8	-	DBEQ01	34	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453947	GCA_002294065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/065/GCA_002294065.1_ASM229406v1	28894102	-
Pseudomonas viridiflava ICMP 13104	1198305	PRJNA296740	296740	Proteobacteria	Gammaproteobacteria	5.54718	58.9	-	LKEJ01	204	5154	4479	12/15/15	8/8/17	Contig	New Zealand Institute for Plant & Food research	SAMN04102826	GCA_001466975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/975/GCA_001466975.1_ASM146697v1	27056212	ICMP 13104
Acinetobacter ursingii	108980	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.5162	40	-	JVHT01	41	3347	3206	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197613	GCA_001056675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/675/GCA_001056675.1_ASM105667v1	26230489	421_ABAU
Raoultella planticola	575	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	5.04364	55.1	-	JZSG01	2920	4695	2923	3/10/15	3/10/15	Contig	FDA/CFSAN	SAMN03295489	GCA_000949945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/945/GCA_000949945.1_CFSAN029441_01.0	-	GCSL-DIFS-295
Neorhizobium galegae bv. officinalis	323656	PRJEB6976	282473	Proteobacteria	Alphaproteobacteria	6.31587	61.5	-	CCRG01	130	6111	5853	4/29/15	4/3/17	Contig	UH	SAMEA2698473	GCA_000986015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/986/015/GCA_000986015.1_NgalHAMBI490Draft	-	-
Campylobacter lanienae	75658	PRJNA340993	340993	Proteobacteria	delta/epsilon subdivisions	1.58911	34.6	-	MJJG01	28	1654	1572	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687013	GCA_002138435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/435/GCA_002138435.1_ASM213843v1	28854596	P0084
Flavobacterium columnare	996	PRJNA360885	360885	FCB group	Bacteroidetes/Chlorobi group	3.37888	30	-	MTCY01	145	3086	2906	6/22/17	6/24/17	Contig	"Faculty of Veterinary Science, Chulalongkorn University"	SAMN06216357	GCA_002204835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/835/GCA_002204835.1_ASM220483v1	28624550	1214
Rhodococcus fascians 05-561-1	1443892	PRJNA233522	233522	Terrabacteria group	Actinobacteria	5.60744	64.5	-	JMFB01	30	5311	5187	9/30/14	4/2/17	Scaffold	Oregon State University	SAMN02569989	GCA_000760875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/875/GCA_000760875.1_R_fas_05-561-1	-	05-561-1
Enterococcus mundtii	53346	PRJNA270385	270385	Terrabacteria group	Firmicutes	3.39441	38.1	-	JXKV01	85	3136	3000	11/25/16	4/6/17	Scaffold	Inner Mongolia Agricultural University	SAMN03267178	GCA_001886035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/035/GCA_001886035.1_ASM188603v1	-	DSM 4838
Carnobacterium maltaromaticum	2751	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.84478	39.1	-	JUUF01	514	-	-	7/10/15	7/13/16	Contig	University of Washington	SAMN03197965	GCA_001058355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/355/GCA_001058355.1_ASM105835v1	26230489	757_CMAL
Francisella noatunensis subsp. orientalis	299583	PRJNA297804	297804	Proteobacteria	Gammaproteobacteria	1.88709	32.4	-	LTDO01	10	1917	1451	5/19/16	4/5/17	Contig	"SNP&SEQ Technology Platform, Science for Life Laboratory"	SAMN04146679	GCA_001648045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/045/GCA_001648045.1_ASM164804v1	-	STIR-GUS-F2f7
Bacillus sp. FJAT-14266	1837130	PRJNA340208	340208	Terrabacteria group	Firmicutes	4.10936	43.9	chromosome:NZ_CP017072.1/CP017072.1	-	1	4237	4005	9/6/16	4/13/17	Complete Genome	Fujian Academy of Agricultural Sciences	SAMN04631804	GCA_001719225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/225/GCA_001719225.1_ASM171922v1	-	FJAT-14266
Xanthomonas vasicola	56459	PRJNA264638	264638	Proteobacteria	Gammaproteobacteria	4.84034	63.3	-	JSBZ01	82	4408	3877	11/6/14	4/2/17	Scaffold	University of Exeter	SAMN03140175	GCA_000772785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/785/GCA_000772785.1_NCPPB1395v1	-	NCPPB 1395
Leptospira kirschneri str. 200802841	1193047	PRJNA167253	167253	Spirochaetes	Spirochaetia	4.69143	36.2	-	AKWH02	91	4358	3943	10/17/12	5/18/17	Contig	J. Craig Venter Institute	SAMN02436493	GCA_000306395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/395/GCA_000306395.2_gls454131v2.0	-	200802841
Salinispora pacifica CNT584	1169191	PRJNA175183	175183	Terrabacteria group	Actinobacteria	5.21772	69.7	-	ARHJ01	79	4918	4531	4/19/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441357	GCA_000375245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/245/GCA_000375245.1_ASM37524v1	-	CNT584
Xanthomonas arboricola pv. pruni	69929	PRJNA294655	294655	Proteobacteria	Gammaproteobacteria	5.02767	65.4	-	LJGN01	214	4431	3925	10/6/15	4/11/17	Contig	Instituto Nacional de Investigacion y Tecnologia Agraria y Alimentaria (INIA)	SAMN04028057	GCA_001306955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/955/GCA_001306955.1_ASM130695v1	26823958	IVIA 2626.1
Pseudomonas psychrotolerans	237610	PRJNA278435	278435	Proteobacteria	Gammaproteobacteria	5.20212	64.8	-	LDSV01	232	4774	4568	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401427	GCA_001476855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/855/GCA_001476855.1_ASM147685v1	26793183	SB11
Rhodococcus rhodochrous	1829	PRJNA251858	251858	Terrabacteria group	Actinobacteria	8.58441	70.4	-	JNVR01	1809	8676	7062	2/17/17	2/17/17	Contig	University of york	SAMN02863112	GCA_002003765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/003/765/GCA_002003765.1_ASM200376v1	-	11Y
Wolbachia pipientis	955	PRJNA407640	407640	Proteobacteria	Alphaproteobacteria	1.17606	33.9	-	NWVH01	131	1148	1001	9/27/17	9/27/17	Scaffold	New Mexico State University	SAMN07666472	GCA_002379145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/145/GCA_002379145.1_ASM237914v1	-	FL2016
Bacillus subtilis subsp. subtilis	135461	PRJNA322253	322253	Terrabacteria group	Firmicutes	3.87692	43.9	chromosome:NZ_CP015975.1/CP015975.1	-	1	4047	3881	6/9/16	3/28/17	Complete Genome	University of Goettingen	SAMN05150066	GCA_001660525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/525/GCA_001660525.1_ASM166052v1	-	delta6
Streptomyces acidiscabies	42234	PRJNA293375	293375	Terrabacteria group	Actinobacteria	10.2485	70.4	-	MUFT01	1957	-	-	5/19/17	5/19/17	Scaffold	USDA/ARS/NCAUR	SAMN06271513	GCA_002150705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/705/GCA_002150705.1_ASM215070v1	-	NRRL B-16524
Pseudomonas monteilii	76759	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	5.87683	62	-	BCAP01	112	5476	5288	10/4/16	4/5/17	Contig	National Institute of Technology and Evaluation	SAMD00031681	GCA_001753835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/835/GCA_001753835.1_ASM175383v1	-	GTC 10899
Bacillus subtilis subsp. subtilis	135461	PRJNA309082	309082	Terrabacteria group	Firmicutes	4.05628	43.9	chromosome:NZ_CP014166.1/CP014166.1	-	1	4192	4018	1/27/16	3/27/17	Complete Genome	Massachusetts Institute of Technology	SAMN04420251	GCA_001541905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/905/GCA_001541905.1_ASM154190v1	27056236	CU1050
Pseudoalteromonas luteoviolacea NCIMB 1942	1365253	PRJNA213499	213499	Proteobacteria	Gammaproteobacteria	5.47656	42	-	AUXT01	226	4805	4502	4/22/16	4/5/17	Contig	Technical University of Denmark	SAMN02250937	GCA_001625595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/625/595/GCA_001625595.1_NCIMB1942_1.0	-	NCIMB 1942
Cronobacter malonaticus 681	1208591	PRJEB158	181122	Proteobacteria	Gammaproteobacteria	4.55392	56.5	-	CALC01	171	4731	3914	11/15/12	5/18/17	Scaffold	LifeTech	SAMEA2272770	GCA_000319535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/535/GCA_000319535.1_ASM31953v1	23166675	681
Pseudomonas fragi	296	PRJNA397499	397499	Proteobacteria	Gammaproteobacteria	5.25602	58.2	-	NQKR01	55	4903	4706	8/24/17	8/27/17	Contig	CSIRO Agriculture and Food	SAMN07459805	GCA_002269445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/445/GCA_002269445.1_ASM226944v1	-	F1794
Vibrio cyclitrophicus 1F53	1136157	PRJNA81861	81861	Proteobacteria	Gammaproteobacteria	5.08217	43.6	-	AICZ02	50	4508	4317	3/26/12	4/5/17	Scaffold	Massachusetts Institute of Technology	SAMN02470480	GCA_000256095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/095/GCA_000256095.2_ASM25609v2	22491847	1F53
Enterococcus cecorum	44008	PRJNA284230	284230	Terrabacteria group	Firmicutes	2.29316	36.5	-	LDEB01	61	2281	2124	6/8/15	4/3/17	Contig	Warsaw University of Life Sciences (SGGW)	SAMN03699966	GCA_001021755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/755/GCA_001021755.1_ASM102175v1	26383654	CB-32
Pseudomonas chlororaphis	587753	PRJEB16416	349357	Proteobacteria	Gammaproteobacteria	7.0652	62.6	chromosome I:NZ_LT629761.1/LT629761.1	-	1	6422	6191	10/21/16	4/5/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216585	GCA_900104995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/995/GCA_900104995.1_IMG-taxon_2667528180_annotated_assembly	-	DSM 21509
Pseudomonas fuscovaginae DAR 77800	1367450	PRJDB1418	219084	Proteobacteria	Gammaproteobacteria	5.97195	61.1	-	BATE01	791	-	-	9/12/13	9/16/15	Contig	Charles Sturt University	SAMD00000758	GCA_000467025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/025/GCA_000467025.1_ASM46702v1	-	DAR77800
Serratia plymuthica	82996	PRJNA313145	313145	Proteobacteria	Gammaproteobacteria	5.47551	56.2	-	LTDN01	64	5198	4986	3/14/16	4/5/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04515841	GCA_001590765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/590/765/GCA_001590765.1_ASM159076v1	-	HRO-C48
Bacillus subtilis subsp. inaquosorum	483913	PRJNA295224	295224	Terrabacteria group	Firmicutes	4.14389	43.9	chromosome:NZ_CP013984.1/CP013984.1	-	1	4283	4049	1/25/16	3/27/17	Complete Genome	Deerland Enzymes	SAMN04044344	GCA_001534785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/785/GCA_001534785.1_ASM153478v1	-	DE111
Alcaligenes faecalis	511	PRJNA258399	258399	Proteobacteria	Betaproteobacteria	4.40271	56.4	-	JQCV01	23	4078	3986	10/30/14	4/2/17	Contig	Centro de Investigacion en Biotecnologia- Universidad Autonoma del Estado de Morelos	SAMN02997353	GCA_000770015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/015/GCA_000770015.1_ASM77001v1	25540337	MOR02
Bradyrhizobium elkanii	29448	PRJNA268549	268549	Proteobacteria	Alphaproteobacteria	7.82075	64.6	-	JXOF01	187	7306	7077	2/20/15	4/3/17	Contig	University of Applied Sciences of Western Switzerland hepia	SAMN03219996	GCA_000878305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/305/GCA_000878305.1_UASWS1015_1.0	26966217	UASWS1015
Staphylococcus equorum	246432	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.7577	32.8	-	LNNC01	84	2699	2576	9/28/16	4/5/17	Contig	Tufts University	SAMN04244256	GCA_001747905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/905/GCA_001747905.1_ASM174790v1	-	BC3
Bacillus subtilis subsp. subtilis	135461	PRJNA305223	305223	Terrabacteria group	Firmicutes	4.03084	43.9	chromosome:NZ_CP013654.1/CP013654.1	-	1	4129	3921	12/14/15	3/27/17	Complete Genome	Hebei Academy of Science	SAMN04320556	GCA_001465815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/465/815/GCA_001465815.1_ASM146581v1	-	BSD-2
Parageobacillus thermoglucosidans	1426	PRJNA296418	296418	Terrabacteria group	Firmicutes	3.87312	43.9	chromosome:NZ_CP012712.1/CP012712.1	-	1	3923	3614	9/22/15	4/4/17	Complete Genome	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN04099008	GCA_001295365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/365/GCA_001295365.1_ASM129536v1	-	DSM 2542
Paeniclostridium sordellii	1505	PRJEB8126	277651	Terrabacteria group	Firmicutes	3.61193	27.3	-	CEKZ01	28	3545	3417	3/13/15	4/4/17	Contig	WTSI	SAMEA1572108	GCA_001372415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/415/GCA_001372415.1_R28058	-	R28058
Bordetella holmesii 41130	1247646	PRJNA178406	178406	Proteobacteria	Betaproteobacteria	3.71699	62.7	-	JDSC01	4	3677	3094	2/14/14	4/2/17	Contig	Institute for Genome Sciences	SAMN02190087	GCA_000572015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/015/GCA_000572015.1_gbhBH003	-	41130
Oribacterium sp. WCC10	1855343	PRJEB17323	351508	Terrabacteria group	Firmicutes	3.64265	41.5	-	FOPH01	53	3123	2940	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216356	GCA_900113415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/415/GCA_900113415.1_IMG-taxon_2651870359_annotated_assembly	-	WCC10
Thalassospira xiamenensis	220697	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	4.63004	54.7	-	DFMA01	21	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457104	GCA_002375565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/565/GCA_002375565.1_ASM237556v1	28894102	-
Acinetobacter sp. NIPH 809	1217713	PRJNA183331	183331	Proteobacteria	Gammaproteobacteria	4.31378	41.3	-	APOI01	3	4028	3844	4/16/13	5/18/17	Scaffold	Broad Institute	SAMN01828191	GCA_000367945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/945/GCA_000367945.1_Acin_sp_NIPH_809_V1	-	NIPH 809
Bacillus safensis	561879	PRJNA259779	259779	Terrabacteria group	Firmicutes	3.67113	41.7	-	LATH01	14	3809	3669	4/16/15	4/3/17	Contig	UC Davis	SAMN03459579	GCA_000972825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/825/GCA_000972825.1_ASM97282v1	26586895	JPL_MERTA8-2
Klebsiella sp. D5A	1140114	PRJNA302083	302083	Proteobacteria	Gammaproteobacteria	5.54001	57.2	-	LOAR01	57	5521	5254	4/18/16	2/21/17	Scaffold	 Institute of Soil Science	SAMN04263894	GCA_001620885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/885/GCA_001620885.1_ASM162088v1	27216548	D5A
Flavobacterium sp. ACAM 123	1189620	PRJNA165647	165647	FCB group	Bacteroidetes/Chlorobi group	3.9556	34.8	-	AJXL01	285	3476	3191	5/23/12	4/17/17	Contig	University of Tasmania	SAMN02471958	GCA_000264055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/055/GCA_000264055.1_Flav123_1.0	-	ACAM 123
Frankia sp. EUN1f	102897	PRJNA38795	38795	Terrabacteria group	Actinobacteria	9.35274	70.8	-	ADGX01	396	7942	7121	2/4/10	5/18/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN02441797	GCA_000177675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/675/GCA_000177675.1_ASM17767v1	-	EUN1f
Bacillus subtilis	1423	PRJNA284309	284309	Terrabacteria group	Firmicutes	4.02533	43.9	chromosome:NZ_CP011534.1/CP011534.1	-	1	4120	3900	5/29/15	3/26/17	Complete Genome	University of Delaware	SAMN03701301	GCA_001015095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/095/GCA_001015095.1_ASM101509v1	26159522	UD1022
Clostridium sp. 7_3_54FAA	665940	PRJNA40017	40017	Terrabacteria group	Firmicutes	5.46489	48.1	-	ACWK01	51	5235	4756	10/31/11	5/18/17	Scaffold	Broad Institute	SAMN02463794	GCA_000233515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/515/GCA_000233515.1_Clostridium_sp_7_3_54FAA_V2	-	7_3_54FAA
Sphingomonas sp. PAMC 26605	1112214	PRJNA76639	76639	Proteobacteria	Alphaproteobacteria	4.79832	65.4	-	AHIS01	23	4438	4221	12/30/11	5/19/17	Scaffold	Korea Polar Research Institute	SAMN02470159	GCA_000241485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/485/GCA_000241485.1_ASM24148v1	22374946	PAMC 26605
Bacillus subtilis	1423	PRJNA277959	277959	Terrabacteria group	Firmicutes	4.03173	43.9	chromosome:CP011051.1	-	1	4138	3896	3/20/15	8/20/15	Complete Genome	New England Biolabs	SAMN03400169	GCA_000959025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/025/GCA_000959025.1_ASM95902v1	-	T30
Ruegeria sp. ANG-R	1577903	PRJNA269051	269051	Proteobacteria	Alphaproteobacteria	4.68455	57.5	-	JWLJ01	41	4637	4474	1/2/15	4/10/17	Scaffold	University of Connecticut	SAMN03246066	GCA_000813985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/985/GCA_000813985.1_ASM81398v1	25755651	ANG-R
Leptolyngbya sp. NIES-2104	1552121	PRJDB3190	301229	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.38631	47.4	-	BBWW01	5	6166	5963	10/31/15	4/11/17	Contig	National Institute for Environmental Studies	SAMD00020894	GCA_001485215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/215/GCA_001485215.1_ASM148521v1	26494835	NIES-2104
Sulfurospirillum cavolei	366522	PRJDB3362	270042	Proteobacteria	delta/epsilon subdivisions	2.69832	43.9	chromosome Unknown:NZ_AP014724.1/AP014724.1	-	1	2705	2630	2/17/15	4/11/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00023484	GCA_001548055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/055/GCA_001548055.1_ASM154805v1	25814615	UCH003
Enterobacter sp. MGH 38	1329834	PRJNA201953	201953	Proteobacteria	Gammaproteobacteria	4.55619	55.5	-	AYIY01	3	4380	4182	10/30/13	4/9/17	Scaffold	Broad Institute	SAMN02138578	GCA_000492855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/855/GCA_000492855.1_Ente_cloa_complex_MGH_38_V1	-	MGH 38
Staphylococcus sp. HMSC12H08	1581092	PRJNA269861	269861	Terrabacteria group	Firmicutes	2.68456	35.9	-	LUAE01	52	2601	2480	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03287014	GCA_001807965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/965/GCA_001807965.1_ASM180796v1	-	HMSC12H08
Corynebacterium sp. KPL1986	1203619	PRJNA170359	170359	Terrabacteria group	Actinobacteria	2.56815	59.3	-	AXLS01	1	2427	2281	10/21/13	4/17/17	Scaffold	Broad Institute	SAMN02596999	GCA_000477975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/975/GCA_000477975.1_Cory_sp_KPL1986_V1	-	KPL1986
Bacillus subtilis subsp. spizizenii	96241	PRJNA271478	271478	Terrabacteria group	Firmicutes	4.02767	43.9	chromosome:CP010434.1	-	1	4137	3968	1/9/15	1/9/15	Complete Genome	BEI Resources/American Type	SAMN03274507	GCA_000816805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/805/GCA_000816805.1_ASM81680v1	-	NRS 231
Escherichia sp. KTE159	1182732	PRJNA165007	165007	Proteobacteria	Gammaproteobacteria	4.8095	50.2	-	ASVR01	7	4831	4504	5/31/13	2/22/17	Scaffold	Broad Institute	SAMN00854684	GCA_000408805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/805/GCA_000408805.1_Esch_coli_KTE159_V1	-	KTE159
Nostoc sp. T09	1932621	PRJNA360300	360300	Terrabacteria group	Cyanobacteria/Melainabacteria group	8.25185	41.5	-	MTAV01	270	6969	6525	5/22/17	5/24/17	Scaffold	CINVESTAV-Langebio	SAMN06208854	GCA_002154695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/695/GCA_002154695.1_ASM215469v1	-	T09
Nocardia sp. 852002-51101_SCH5132738	1834095	PRJNA305922	305922	Terrabacteria group	Actinobacteria	7.66395	67.8	-	LZML01	217	7034	6739	6/17/16	4/12/17	Contig	JCVI	SAMN04696150	GCA_001665695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/695/GCA_001665695.1_ASM166569v1	-	852002-51101_SCH5132738
Shewanella sp. POL2	1201295	PRJNA169039	169039	Proteobacteria	Gammaproteobacteria	4.91395	46.2	-	AKZL01	242	4436	4079	7/30/12	5/19/17	Contig	Institute of Biochemistry and Biophysics PAS	SAMN02469948	GCA_000282755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/755/GCA_000282755.1_ASM28275v1	21464603	POL2
Bradyrhizobium sp. WSM1253	319003	PRJNA62341	62341	Proteobacteria	Alphaproteobacteria	8.71981	63.1	-	AHMB01	2	8346	7851	1/24/12	7/9/17	Scaffold	JGI	SAMN02261403	GCA_000244935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/935/GCA_000244935.1_ASM24493v1	26629308	WSM1253
Streptococcus sp. 2_1_36FAA	469609	PRJNA37947	37947	Terrabacteria group	Firmicutes	2.23141	40.5	-	ACOI02	5	2208	2086	10/21/09	4/17/17	Scaffold	Broad Institute	SAMN02463724	GCA_000161955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/955/GCA_000161955.2_Strept_sp_2_1_36FAA_V2	-	2_1_36FAA
Bacillus subtilis subsp. subtilis str. BAB-1	1302650	PRJNA192249	192249	Terrabacteria group	Firmicutes	4.02194	43.9	chromosome:NC_020832.1/CP004405.1	-	1	4124	3912	3/29/13	3/23/17	Complete Genome	"Plant Protection Institute, Hebei Academy of Agricultural and Forestry Sciences"	SAMN02603719	GCA_000349795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/795/GCA_000349795.1_ASM34979v1	25103757	BAB-1
Bifidobacterium sp. UBA787	1946116	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.92393	60.3	-	DBJB01	134	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451158	GCA_002296735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/735/GCA_002296735.1_ASM229673v1	28894102	-
Thermococcus sp. 40_45	1641381	PRJNA278302	278302	Euryarchaeota	Thermococci	1.4815	40	-	LGFJ01	102	1669	1669	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445136	GCA_001508175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/175/GCA_001508175.1_ASM150817v1	26787827	-
Serratia sp. Leaf51	1736224	PRJNA297956	297956	Proteobacteria	Gammaproteobacteria	5.4209	53.3	-	LMLJ01	58	4998	4735	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151604	GCA_001422575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/575/GCA_001422575.1_Leaf51	26633631	Leaf51
Nocardiopsis sp. CNR-923	1904965	PRJNA344658	344658	Terrabacteria group	Actinobacteria	5.55027	71.1	-	MKKC01	153	5116	3679	1/11/17	4/17/17	Scaffold	"Scripps Institution of Oceanography, UCSD"	SAMN05830211	GCA_001942255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/255/GCA_001942255.1_ASM194225v1	27902408	CNR-923
Synechocystis sp. PCC 7509	927677	PRJNA159501	159501	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.90883	41.7	-	ALVU02	4	4824	4568	1/17/13	4/17/17	Scaffold	JGI	SAMN02261355	GCA_000332075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/075/GCA_000332075.2_ASM33207v2	23277585	PCC 7509
Polaromonas sp. OV174	1855300	PRJEB17170	351370	Proteobacteria	Betaproteobacteria	4.53151	61.3	-	FOKZ01	61	4403	4198	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216344	GCA_900112285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/285/GCA_900112285.1_IMG-taxon_2609459740_annotated_assembly	-	OV174
Sulfurovum sp. 16-42-52	1970441	PRJNA379596	379596	Proteobacteria	delta/epsilon subdivisions	1.98732	41.7	-	NCHB01	66	2071	1999	8/16/17	8/16/17	Contig	None	SAMN06622279	GCA_002281755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/755/GCA_002281755.1_ASM228175v1	-	-
Pantoea sp. A4	1225184	PRJNA173196	173196	Proteobacteria	Gammaproteobacteria	5.32972	52.9	-	ALXE01	71	4791	4644	9/10/12	4/16/17	Contig	University of Malaya	SAMN02471853	GCA_000295955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/955/GCA_000295955.2_ASM29595v2	23144374	A4
Prevotella sp. P6B4	1410614	PRJNA223445	223445	FCB group	Bacteroidetes/Chlorobi group	3.5525	47.4	-	JHVE01	49	2990	2860	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02952984	GCA_000619985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/985/GCA_000619985.1_ASM61998v1	-	P6B4
Enterococcus sp. HMSC077E04	1715073	PRJNA296201	296201	Terrabacteria group	Firmicutes	2.94859	37.6	-	LTJY01	316	3030	2861	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04495800	GCA_001809335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/335/GCA_001809335.1_ASM180933v1	-	HMSC077E04
Lactobacillus sp. HMSC072E07	1715100	PRJNA296228	296228	Terrabacteria group	Firmicutes	2.90316	46.6	-	LTJQ01	61	2883	2694	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477512	GCA_001809485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/485/GCA_001809485.1_ASM180948v1	-	HMSC072E07
Methylophilus sp. Leaf414	1736371	PRJNA297956	297956	Proteobacteria	Betaproteobacteria	3.02862	48.2	-	LMQQ01	9	2887	2813	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151761	GCA_001425425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/425/GCA_001425425.1_Leaf414	26633631	Leaf414
Novosphingobium sp. AAP1	1523413	PRJNA255545	255545	Proteobacteria	Alphaproteobacteria	4.75058	65.6	-	LJHO01	50	4168	4025	9/22/15	4/11/17	Contig	"Institute of Microbiology, ASCR"	SAMN02925435	GCA_001295765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/765/GCA_001295765.1_ASM129576v1	-	AAP1
Treponema sp. CETP13	1908540	PRJNA260954	260954	Spirochaetes	Spirochaetia	2.54251	33.4	-	MLPZ01	21	2288	2215	11/22/16	11/22/16	Contig	National Environmental Engineering Research Institute-CSIR	SAMN05905573	GCA_001885315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/315/GCA_001885315.1_ASM188531v1	-	-
Anabaena sp. MDT14b	1710886	PRJNA294801	294801	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.95942	38.9	-	LJOV01	1227	4873	4546	6/20/16	6/20/16	Contig	Oregon State University	SAMN04028822	GCA_001672195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/195/GCA_001672195.1_ASM167219v1	-	-
Citrobacter sp. MGH99	1686376	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.18257	51.8	-	LESL01	10	5182	4896	6/19/15	4/10/17	Scaffold	Broad Institute	SAMN03280161	GCA_001034445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/445/GCA_001034445.1_Citr_freu_complex_MGH99_V1	-	MGH99
Methylobacterium sp. UNCCL110	1449057	PRJNA234870	234870	Proteobacteria	Alphaproteobacteria	6.61361	69.7	-	JQJG01	138	6294	5927	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02745432	GCA_000745415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/415/GCA_000745415.1_ASM74541v1	-	UNCCL110
Herbaspirillum sp. VT-16-41	1953765	PRJNA356909	356909	Proteobacteria	Betaproteobacteria	5.83761	62.1	-	MUXB01	283	5277	5047	2/9/17	4/17/17	Contig	Human Microbiology Institute	SAMN06130135	GCA_001994935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/935/GCA_001994935.1_ASM199493v1	-	VT-16-41
Candidatus Arthromitus sp. SFB-3	1054944	PRJNA69901	69901	Terrabacteria group	Firmicutes	0.951018	28.2	-	AFXT01	441	1329	1307	3/14/12	7/29/15	Contig	Stanford University	SAMN00630894	GCA_000252705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/705/GCA_000252705.2_ASM25270v2	-	SFB-3
Paracoccus sp. 228	1192054	PRJNA272835	272835	Proteobacteria	Alphaproteobacteria	4.13161	66.3	-	JYGY01	32	3971	3802	2/23/15	4/17/17	Scaffold	University of Gdansk	SAMN03287307	GCA_000967825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/825/GCA_000967825.1_ASM96782v1	-	228
Nocardioides sp. Root140	1736460	PRJNA297942	297942	Terrabacteria group	Actinobacteria	5.43182	69.4	-	LMFI01	17	5179	5034	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155729	GCA_001426745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/745/GCA_001426745.1_Root140	26633631	Root140
Epulopiscium sp. SCG-B05WGA-EpuloA1	1712376	PRJNA294498	294498	Terrabacteria group	Firmicutes	3.00317	31.1	-	LJHC01	145	2601	2440	2/2/17	2/2/17	Scaffold	King Abdullah University of Science and Technology (KAUST)	SAMN04038457	GCA_001983535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/535/GCA_001983535.1_ASM198353v1	-	-
Erythrobacter sp. HI0019	1822222	PRJNA305749	305749	Proteobacteria	Alphaproteobacteria	3.34415	64	-	LWEN01	880	3488	2953	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580761	GCA_001634695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/695/GCA_001634695.1_ASM163469v1	-	HI0019
Sulfitobacter sp. HI0040	1822232	PRJNA305749	305749	Proteobacteria	Alphaproteobacteria	4.18143	62.9	-	LWEX01	611	4218	3817	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580771	GCA_001634885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/885/GCA_001634885.1_ASM163488v1	-	HI0040
Polaribacter sp. Hel1_85	1250005	PRJNA253169	253169	FCB group	Bacteroidetes/Chlorobi group	3.91407	29.2	-	JPDS01	4	3444	3336	10/14/14	4/9/17	Contig	Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures	SAMN02867807	GCA_000766795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/766/795/GCA_000766795.1_ASM76679v1	25478683	Hel1_85
Marinobacter sp. C1S70	1396859	PRJNA217943	217943	Proteobacteria	Gammaproteobacteria	4.12641	57.3	-	AXBW01	105	3817	3659	10/21/13	4/9/17	Contig	University of Illinois at Chicago	SAMN02345632	GCA_000475355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/355/GCA_000475355.1_De_Novo_assembly	24356826	C1S70
Acidovorax sp. MR-S7	1268622	PRJDB715	203273	Proteobacteria	Betaproteobacteria	5.00889	68.3	-	BANP01	117	4747	4552	5/16/13	4/10/17	Scaffold	AIST	SAMD00010747	GCA_000400995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/995/GCA_000400995.2_ASM40099v2	23814112	MR-S7
Psychrobacter sp. 1501(2011)	1002339	PRJNA65121	65121	Proteobacteria	Gammaproteobacteria	3.23482	41.7	-	AFHU01	28	2537	2385	5/13/11	4/7/17	Scaffold	Baylor College of Medicine	SAMN00259686	GCA_000213615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/615/GCA_000213615.1_ASM21361v1	-	1501(2011)
Maribacter sp. UBA1493	1946802	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.1684	35.7	-	DCRL01	55	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455385	GCA_002325035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/035/GCA_002325035.1_ASM232503v1	28894102	-
Caulobacter sp. AP07	1144304	PRJNA83031	83031	Proteobacteria	Alphaproteobacteria	5.61596	69	-	AKKF01	326	5202	4938	7/27/12	5/18/17	Contig	Oak Ridge National Lab	SAMN00789123	GCA_000281955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/955/GCA_000281955.1_Caulobacter.strAP07_v1.0	23045501	AP07
Janthinobacterium sp. Ant5-2-1	1755239	PRJNA293097	293097	Proteobacteria	Betaproteobacteria	6.19635	62.5	-	LNCE01	179	5597	5400	11/18/15	4/11/17	Contig	University of Alabama at Birmingham	SAMN04231541	GCA_001445815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/815/GCA_001445815.1_ASM144581v1	26798103	Ant5-2-1 (purple)
Eubacterium sp. An11	1965542	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.91247	46.8	-	NFLV01	104	3741	3543	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473581	GCA_002161065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/065/GCA_002161065.1_ASM216106v1	-	An11
Alcanivorax sp. NBRC 102028	1113897	PRJDB2892	248804	Proteobacteria	Gammaproteobacteria	3.12874	54.6	-	BDAT01	31	2841	2757	3/12/16	4/12/17	Contig	National Institute of Technology and Evaluation	SAMD00048770	GCA_001602255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/255/GCA_001602255.1_ASM160225v1	-	NBRC 102028
Brevundimonas sp. AAP58	1523422	PRJNA255559	255559	Proteobacteria	Alphaproteobacteria	2.96683	67.7	-	LJHU01	138	3011	2857	9/22/15	4/11/17	Contig	"Institute of Microbiology, ASCR"	SAMN02927139	GCA_001295975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/975/GCA_001295975.1_ASM129597v1	-	AAP58
Pedobacter sp. Leaf194	1736297	PRJNA297956	297956	FCB group	Bacteroidetes/Chlorobi group	4.5731	39.3	-	LMPU01	15	4009	3917	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151677	GCA_001423945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/945/GCA_001423945.1_Leaf194	26633631	Leaf194
Pseudovibrio sp. Ad26	989410	PRJNA298121	298121	Proteobacteria	Alphaproteobacteria	6.1814	51.2	-	LMCE01	159	5718	5522	4/19/16	4/17/17	Contig	University College Cork	SAMN04147119	GCA_001623285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/285/GCA_001623285.1_ASM162328v1	27065959	Ad26
Stenotrophomonas sp. DDT-1	1609637	PRJNA286061	286061	Proteobacteria	Gammaproteobacteria	4.51457	66.5	-	LEKR01	97	4234	4046	3/7/16	4/12/17	Contig	Zhejiang University	SAMN03764479	GCA_001580555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/555/GCA_001580555.1_ASM158055v1	26888254	DDT-1
Thermotoga sp. Mc24	1231241	PRJNA174821	174821	Thermotogae	Thermotogae	1.82348	46	-	JSFH01	12	1874	1764	11/17/14	4/9/17	Contig	University of Alberta	SAMN03143094	GCA_000784835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/835/GCA_000784835.1_ASM78483v1	25500512	Mc24
Bacillus subtilis XF-1	1233100	PRJNA175410	175410	Terrabacteria group	Firmicutes	4.06119	43.9	chromosome:NC_020244.1/CP004019.1	-	1	4175	3945	2/8/13	3/23/17	Complete Genome	 Yunnan Agricultural University	SAMN02602961	GCA_000338735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/338/735/GCA_000338735.1_ASM33873v1	23558530	XF-1
Thioalkalivibrio sp. ALgr3	1239292	PRJNA176571	176571	Proteobacteria	Gammaproteobacteria	2.88157	67.6	-	ARIC01	61	2796	2673	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441348	GCA_000377325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/325/GCA_000377325.1_ASM37732v1	-	ALgr3
Bacteroides sp. 2_1_22	469588	PRJNA38349	38349	FCB group	Bacteroidetes/Chlorobi group	6.00375	42	-	ACPQ01	36	4763	4594	10/23/09	5/18/17	Scaffold	Broad Institute	SAMN02463734	GCA_000162155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/155/GCA_000162155.1_ASM16215v1	-	2_1_22
Exiguobacterium sp. S17	856854	PRJNA202056	202056	Terrabacteria group	Firmicutes	3.12736	53.1	-	ASXD01	163	3334	3129	6/17/13	4/17/17	Contig	"Facultad de Ciencias Exactas, Universidad de Buenos Aires"	SAMN02470814	GCA_000411915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/915/GCA_000411915.1_ExiS17_1.0	23525943	S17
Thauera sp. DNT-1	167065	PRJDB662	252056	Proteobacteria	Betaproteobacteria	3.35358	66.8	-	BAZL01	1824	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000430	GCA_001310835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/835/GCA_001310835.1_ASM131083v1	-	JCM 12309
Colwellia sp. Phe_37	1795872	PRJNA301966	301966	Proteobacteria	Gammaproteobacteria	3.06329	38.7	-	LSMS01	332	2891	2548	2/23/16	2/23/16	Contig	The University of Texas at Austin	SAMN04458762	GCA_001566895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/895/GCA_001566895.1_ASM156689v1	-	-
Coprobacillus sp. CAG:183	1262853	PRJEB745	206600	Terrabacteria group	Firmicutes	3.14066	31.4	-	CAZV01	211	2859	2843	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138540	GCA_000433055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/055/GCA_000433055.1_MGS183	-	-
Shigella sp. FC2541	1898677	PRJNA342386	342386	Proteobacteria	Gammaproteobacteria	4.52129	50.8	-	MINT01	649	5289	4019	9/17/16	8/8/17	Contig	Christian Medical College	SAMN05756148	GCA_001730395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/395/GCA_001730395.1_ASM173039v1	-	FC2541
Prochlorococcus sp. MIT 0701	1499502	PRJNA246696	246696	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.59257	50.6	-	JNBA01	53	2596	2438	9/29/14	4/9/17	Contig	MIT	SAMN02769573	GCA_000760295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/295/GCA_000760295.1_ASM76029v1	25977791	MIT 0701
Fusobacterium sp. OBRC1	1032505	PRJNA165911	165911	Fusobacteria	Fusobacteriia	2.49727	26.8	-	JANA01	87	2511	2332	1/28/14	4/17/17	Contig	JCVI	SAMN02641567	GCA_000524235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/235/GCA_000524235.1_FspOBRC1v1.0	-	OBRC1
Azospirillum sp. 51_20	1896972	PRJNA321218	321218	Proteobacteria	Alphaproteobacteria	1.98008	50.7	-	MNTV01	41	1997	1902	12/23/16	12/23/16	Scaffold	None	SAMN05717305	GCA_001917175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/175/GCA_001917175.1_ASM191717v1	27819664	-
Desulfovibrio sp. TomC	1562888	PRJNA264360	264360	Proteobacteria	delta/epsilon subdivisions	5.07317	61.7	-	JSEH01	84	4412	4276	12/15/14	4/10/17	Contig	Centre Bioengineering RAS	SAMN03121506	GCA_000801335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/335/GCA_000801335.2_ASM80133v2	-	TomC
Actinomyces sp. oral taxon 170 str. F0386	762963	PRJNA48493	48493	Terrabacteria group	Actinobacteria	3.13514	67.7	-	AFBL01	76	2674	2522	4/7/11	6/15/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189093	GCA_000195595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/595/GCA_000195595.1_ASM19559v1	-	F0386
Micromonospora sp. WMMB235	1172030	PRJNA339227	339227	Terrabacteria group	Actinobacteria	7.0313	72.8	-	MDRX01	2	6316	6156	10/27/16	4/13/17	Contig	University of Wisconsin-Madison	SAMN05583721	GCA_001855515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/515/GCA_001855515.1_ASM185551v1	-	WMMB235
Rhodobacter sp. BACL10 MAG-120419-bin15	1655557	PRJNA273799	273799	Proteobacteria	Alphaproteobacteria	2.83405	50.5	-	LICP01	765	2974	2483	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741990	GCA_001439135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/135/GCA_001439135.1_ASM143913v1	-	-
Parabacteroides sp. D26	658662	PRJNA39407	39407	FCB group	Bacteroidetes/Chlorobi group	5.13846	45.2	-	ACUB01	46	4395	4084	7/16/15	6/12/17	Scaffold	Broad Institute	SAMN00103310	GCA_001078555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/555/GCA_001078555.1_Parabacteroides_sp_D26_V1	-	D26
Ralstonia sp. MD27	1676617	PRJNA288175	288175	Proteobacteria	Betaproteobacteria	5.91732	63.4	-	LFZM01	70	5633	5454	7/16/15	4/10/17	Scaffold	University of Massachusetts Dartmouth	SAMN03795681	GCA_001078575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/575/GCA_001078575.1_ASM107857v1	26450738	MD27
Propionibacterium sp. KPL1838	1203572	PRJNA169461	169461	Terrabacteria group	Actinobacteria	2.53389	63.3	-	AXMN01	3	2353	2186	10/21/13	4/17/17	Scaffold	Broad Institute	SAMN02597020	GCA_000477735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/735/GCA_000477735.1_Prop_sp_KPL1838_V1	-	KPL1838
Olsenella sp. An293	1965626	PRJNA377666	377666	Terrabacteria group	Actinobacteria	2.31433	67.9	-	NFIT01	35	2096	1986	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473713	GCA_002159495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/495/GCA_002159495.1_ASM215949v1	-	An293
Alistipes sp. An66	1965650	PRJNA377666	377666	FCB group	Bacteroidetes/Chlorobi group	3.05565	59.4	-	NFHT01	54	2481	2375	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473744	GCA_002161445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/445/GCA_002161445.1_ASM216144v1	-	An66
Campylobacter sp. BCW_4319	1904035	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.66274	30.7	-	MKAQ01	18	1704	1569	10/4/16	4/13/17	Contig	University of California at Davis	SAMN03358046	GCA_001764435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/435/GCA_001764435.1_ASM176443v1	-	BCW_4319
Neisseria sp. HMSC31F04	1581075	PRJNA269844	269844	Proteobacteria	Betaproteobacteria	2.25766	54.2	-	LWNI01	87	2298	2119	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436258	GCA_001807735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/735/GCA_001807735.1_ASM180773v1	-	HMSC31F04
Porphyromonas sp. COT-108 OH2963	1515614	PRJNA253609	253609	FCB group	Bacteroidetes/Chlorobi group	2.17937	44.6	-	JRAP01	21	1824	1747	10/27/14	4/9/17	Contig	UC Davis	SAMN03002888	GCA_000768895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/895/GCA_000768895.1_ASM76889v1	25858832	COT-108 OH2963
Tannerella sp. oral taxon BU063 isolate Cell 8/11	1411915	PRJNA222536	222536	FCB group	Bacteroidetes/Chlorobi group	2.66536	54.9	-	AYYF01	1618	2422	2385	12/18/13	12/18/13	Contig	The Ohio State University	SAMN02419815	GCA_000510565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/510/565/GCA_000510565.1_BU063sc811	-	-
Bartonella sp. 114	1933909	PRJNA360985	360985	Proteobacteria	Alphaproteobacteria	1.57168	35.9	chromosome:NZ_CP019784.1/CP019784.1	-	1	1357	1181	3/7/17	3/10/17	Chromosome	University of Basel	SAMN06213871	GCA_002022645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/645/GCA_002022645.1_ASM202264v1	-	114
Peptoniphilus sp. KHD5	1776390	PRJEB14116	322373	Terrabacteria group	Firmicutes	1.85157	49.4	-	FLQT01	3	1801	1699	6/15/16	4/12/17	Contig	URMITE	SAMEA3996551	GCA_900088125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/125/GCA_900088125.1_PRJEB14116	-	KHD5
Veillonella sp. CAG:933	1262980	PRJEB1038	206692	Terrabacteria group	Firmicutes	2.88575	42	-	CAWP01	170	2811	2777	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138459	GCA_000431435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/435/GCA_000431435.1_MGS933	-	-
Capnocytophaga sp. oral taxon 326 str. F0382	1035193	PRJNA67197	67197	FCB group	Bacteroidetes/Chlorobi group	3.21812	38.5	-	AMEU01	127	3032	2805	12/10/12	4/17/17	Scaffold	Washington University Genome Center	SAMN02436687	GCA_000318295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/295/GCA_000318295.1_ASM31829v1	-	F0382
uncultured Coprococcus sp.	458253	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.91257	41	-	FMDT01	10	2579	2529	8/16/16	8/16/16	Scaffold	SC	SAMEA3545228	GCA_900066115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/115/GCA_900066115.1_13414_6_3	-	-
Delftia sp. JGI 0001020-O15	1298870	PRJNA190845	190845	Proteobacteria	Betaproteobacteria	0.372793	54.2	-	AXWG01	52	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440764	GCA_000484875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/875/GCA_000484875.1_ASM48487v1	-	JGI 0001020-O15
Collinsella sp. CAG:398	1262852	PRJEB866	206764	Terrabacteria group	Actinobacteria	2.14978	62	-	CBHB01	71	1879	1833	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138580	GCA_000433855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/855/GCA_000433855.1_MGS398	-	-
Thalassospira sp. MCCC 1A03138	1470576	PRJNA239939	239939	Proteobacteria	Alphaproteobacteria	4.56619	54.7	-	JFJY01	33	4210	4132	4/28/17	5/3/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02671746	GCA_002115785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/785/GCA_002115785.1_ASM211578v1	-	MCCC 1A03138
Sulfurospirillum sp. UBA2217	1947594	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.41894	39.5	-	DCUJ01	13	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453159	GCA_002328495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/495/GCA_002328495.1_ASM232849v1	28894102	-
Loktanella sp. UBA3427	1946766	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.53489	54.2	-	DFSW01	231	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451484	GCA_002379035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/035/GCA_002379035.1_ASM237903v1	28894102	-
Alteromonas sp. LOR	1537994	PRJNA258506	258506	Proteobacteria	Gammaproteobacteria	4.40982	44.2	-	JQFW01	57	3801	3697	9/10/14	4/9/17	Scaffold	Bar Ilan university	SAMN02999425	GCA_000753865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/865/GCA_000753865.1_ASM75386v1	25342689	LOR
Afipia sp. P52-10	1429916	PRJNA230052	230052	Proteobacteria	Alphaproteobacteria	5.08552	63.5	-	AZSJ01	7	4778	4656	1/7/14	4/9/17	Contig	Public Health Agency of Canada	SAMN02422547	GCA_000516555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/555/GCA_000516555.1_P52-10	25874801	P52-10
Pseudonocardia sp. Ae717_Ps2	1885573	PRJNA336483	336483	Terrabacteria group	Actinobacteria	7.43178	73.2	-	MCIS01	26	6927	6587	1/4/17	4/17/17	Contig	University of East Anglia	SAMN05511419	GCA_001932475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/475/GCA_001932475.1_ASM193247v1	-	Ae717_Ps2
Haemophilus sp. HMSC61B11	1608882	PRJNA274534	274534	Proteobacteria	Gammaproteobacteria	2.1504	39.1	-	LWQR01	71	2074	1969	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498882	GCA_001838615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/615/GCA_001838615.1_ASM183861v1	-	HMSC61B11
Methanosarcina sp. 2.H.T.1A.6	1483599	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.07463	42.8	-	JJOY01	54	3506	3295	4/23/15	4/10/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708991	GCA_000979455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/455/GCA_000979455.1_gtlEnvA5udCFS	25756680	2.H.T.1A.6
Aerococcus sp. HMSC035B07	1715184	PRJNA296312	296312	Terrabacteria group	Firmicutes	2.08721	47.4	-	LTRT01	60	1893	1816	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498652	GCA_001836025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/025/GCA_001836025.1_ASM183602v1	-	HMSC035B07
Selenomonas sp. AE3005	1485543	PRJNA243947	243947	Terrabacteria group	Firmicutes	2.82337	49	-	JMME01	25	2662	2541	5/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743381	GCA_000686945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/945/GCA_000686945.1_ASM68694v1	-	AE3005
Thiomonas sp. 15-66-11	1970452	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	3.11792	66	-	NCKA01	132	2977	2886	8/16/17	8/16/17	Contig	None	SAMN06622202	GCA_002282675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/675/GCA_002282675.1_ASM228267v1	-	-
Rhodanobacter sp. Root179	1736482	PRJNA297942	297942	Proteobacteria	Gammaproteobacteria	3.90575	66.5	-	LMHR01	89	3475	3377	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04155751	GCA_001428465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/465/GCA_001428465.1_Root179	26633631	Root179
Rothia sp. HMSC075F09	1739253	PRJNA299903	299903	Terrabacteria group	Actinobacteria	2.3095	59.5	-	LTHR01	42	1814	1719	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477587	GCA_001810515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/515/GCA_001810515.1_ASM181051v1	-	HMSC075F09
Sphingobacterium sp. IITKGP-BTPF85	1338009	PRJNA205468	205468	FCB group	Bacteroidetes/Chlorobi group	5.61081	36.3	-	ASZT02	344	5254	3823	8/15/13	4/18/17	Contig	Indian Institute of Technology Kharagpur	SAMN02179235	GCA_001006065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/065/GCA_001006065.1_Sphingobacterium_2.0	-	IITKGP-BTPF85
Citromicrobium sp. RCC1897	1812182	PRJNA314562	314562	Proteobacteria	Alphaproteobacteria	3.28167	64.8	-	LUGI01	17	3204	3127	5/19/16	4/12/17	Contig	Xiamen University	SAMN04538184	GCA_001648095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/095/GCA_001648095.1_ASM164809v1	-	RCC1897
Megasphaera sp. An286	1965622	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.37579	53.3	-	NFIY01	52	2219	2126	5/30/17	6/3/17	Contig	Veterinary Research Institute	SAMN06473708	GCA_002163455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/455/GCA_002163455.1_ASM216345v1	-	An286
Sphingobium sp. YL23	1335760	PRJNA203681	203681	Proteobacteria	Alphaproteobacteria	3.8001	63.7	-	ASTG01	67	3734	3604	6/20/13	4/8/17	Contig	Institute of Urban Environment	SAMN02470046	GCA_000412635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/635/GCA_000412635.1_Sphingobium_sp._strain_YL23	23908290	YL23
Pusillimonas sp. UBA3615	1947368	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	3.02656	54.4	-	DFLQ01	17	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454021	GCA_002375405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/405/GCA_002375405.1_ASM237540v1	28894102	-
Halomonas sp. A3H3	1346287	PRJEB4184	215824	Proteobacteria	Gammaproteobacteria	5.64388	54.8016	chromosome I:NZ_HG423343.1/HG423343.1; plasmid II:NZ_HG423344.1/HG423344.1	CBRE01	33	10608	10291	8/21/13	9/17/15	Chromosome	GMGM-UMR7156-CNRS/UDS	SAMEA3146254	GCA_000982975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/975/GCA_000982975.1_HALA3H3_3393	24115546	A3H3
Idiomarina sp. WRN-38	1781070	PRJNA309018	309018	Proteobacteria	Gammaproteobacteria	6.15203	52.8	-	LRFI01	225	5889	5664	5/10/16	5/10/16	Contig	"Agricultural Culture Collection of China (ACCC), Institute of Agricultural Resources and Regional Planning"	SAMN04419355	GCA_001641605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/605/GCA_001641605.1_WRN-38	-	WRN-38
Hyphomicrobium sp. 32-62-53	1970390	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	4.38407	61.6	-	NCEW01	57	4261	4096	8/16/17	8/16/17	Scaffold	None	SAMN06622336	GCA_002280885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/885/GCA_002280885.1_ASM228088v1	-	-
Acidiphilium sp. 37-60-79	1970298	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	3.06966	60	-	NCBV01	98	2916	2791	8/16/17	8/16/17	Contig	None	SAMN06622415	GCA_002279355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/355/GCA_002279355.1_ASM227935v1	-	-
Aeromicrobium sp. PE09-221	1898043	PRJNA341930	341930	Terrabacteria group	Actinobacteria	3.99946	67.5	-	MIJB01	111	3892	3745	6/6/17	6/8/17	Contig	University of the Western Cape	SAMN05730647	GCA_002174305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/305/GCA_002174305.1_ASM217430v1	28218694	PE09-221
Xanthomonas sp. GPE 39	1583099	PRJNA270166	270166	Proteobacteria	Gammaproteobacteria	3.53448	62.8	-	JZHZ01	8	2973	2798	3/25/15	4/10/17	Scaffold	CIRAD	SAMN03263616	GCA_000963005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/005/GCA_000963005.1_Xal-GPE_39-G1	26213974	GPE 39
Bacillus subtilis subsp. subtilis str. BSP1	1192196	PRJNA166925	166925	Terrabacteria group	Firmicutes	4.04375	43.9	chromosome:NC_019896.1/CP003695.1	-	1	4155	3799	12/17/12	3/23/17	Complete Genome	DSM Nutritional Products Ltd	SAMN02603212	GCA_000321395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/395/GCA_000321395.1_ASM32139v1	23409263	BSP1
Atopobium sp. UBA2085	1946065	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.23719	59.9	-	DCZL01	261	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457480	GCA_002331325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/325/GCA_002331325.1_ASM233132v1	28894102	-
Sulfurimonas sp. RIFOXYC2_FULL_36_7	1802258	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.5726	35	-	MICE01	383	1728	1111	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316184	GCA_001829775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/775/GCA_001829775.1_ASM182977v1	27774985	-
Chryseobacterium sp. YR460	1500290	PRJNA247532	247532	FCB group	Bacteroidetes/Chlorobi group	4.62939	34.2	-	JUGG01	16	4263	4139	12/9/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02787111	GCA_000799195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/195/GCA_000799195.1_ASM79919v1	-	YR460
Cellulomonas sp. FA1	1346710	PRJNA252876	252876	Terrabacteria group	Actinobacteria	3.99035	75.3	-	LBMY01	1	3588	3446	5/1/15	4/10/17	Contig	DOE Joint Genome Institute	SAMN02865413	GCA_000986825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/986/825/GCA_000986825.1_ASM98682v1	26089422	FA1
Hydrogenophaga sp. T4	1437444	PRJNA231928	231928	Proteobacteria	Betaproteobacteria	3.79219	63	-	AZSO01	2242	4908	4866	2/20/14	2/20/14	Contig	MiOxyFun	SAMN02460715	GCA_000576245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/245/GCA_000576245.1_T4	-	T4
Cycloclasticus sp. 46_120_T64	1856281	PRJNA320927	320927	Proteobacteria	Gammaproteobacteria	2.21031	45.9	-	MAAM01	15	2112	2057	5/31/17	5/31/17	Scaffold	Lawrence Berkeley National Lab	SAMN05179560	GCA_002162695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/695/GCA_002162695.1_ASM216269v1	28652349	-
Methylophaga sp. 42_8_T64	1856286	PRJNA320927	320927	Proteobacteria	Gammaproteobacteria	1.56491	41.8	-	MAAW01	134	1665	1611	5/31/17	5/31/17	Scaffold	Lawrence Berkeley National Lab	SAMN05179570	GCA_002163175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/175/GCA_002163175.1_ASM216317v1	28652349	-
Mesorhizobium sp. Root102	1736422	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	6.76157	62.4	-	LMCP01	48	6691	6350	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155691	GCA_001425625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/625/GCA_001425625.1_Root102	26633631	Root102
Micavibrio sp. UBA1512	1946904	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.09214	58.6	-	DCQS01	8	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452624	GCA_002323965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/965/GCA_002323965.1_ASM232396v1	28894102	-
Variovorax sp. JS1663	1851577	PRJNA322211	322211	Proteobacteria	Betaproteobacteria	7.32436	68	-	LYMK01	140	6971	6680	5/24/17	5/30/17	Contig	Oak Ridge National Laboratory	SAMN05076572	GCA_002157355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/355/GCA_002157355.1_ASM215735v1	28526789	JS1663
Vibrio crassostreae	246167	PRJEB5877	278608	Proteobacteria	Gammaproteobacteria	5.84561	44.2	-	CCJX01	189	5257	5004	3/20/15	4/4/17	Contig	STATION BIOLOGIQUE DE ROSCOFF	SAMEA2591286	GCA_001368875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/875/GCA_001368875.1_VRSK34_PRJEB5877	-	J5-4
Acinetobacter venetianus RAG-1 = CIP 110063	1191460	PRJNA167043	167043	Proteobacteria	Gammaproteobacteria	3.46434	39.2	-	AKIQ01	87	3353	3188	6/17/12	3/30/17	Scaffold	University of Florence	SAMN02471743	GCA_000271425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/425/GCA_000271425.1_A._venetianus_RAG-1_v._1.0	22887671	RAG-1
Xanthomonas translucens pv. phlei	487906	PRJEB9905	292954	Proteobacteria	Gammaproteobacteria	4.39681	68.4	-	CXOJ01	142	3742	3457	8/15/15	4/4/17	Contig	CEBITEC	SAMEA3486273	GCA_001282885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/885/GCA_001282885.1_LMG730	-	-
Snodgrassella alvi	1196083	PRJNA339423	339423	Proteobacteria	Betaproteobacteria	2.50111	41.2	-	NAHH01	62	2294	2191	4/13/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603563	GCA_002088515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/515/GCA_002088515.1_ASM208851v1	-	A-9-24
Microbacterium sp. UCD-TDU	1247714	PRJNA178255	178255	Terrabacteria group	Actinobacteria	3.74632	68.4	-	AOSO01	8	3690	3586	2/15/13	4/8/17	Scaffold	UC Davis	SAMN02471297	GCA_000340625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/625/GCA_000340625.1_Microbacterium_sp._UCD-TDU	23516225	UCD-TDU
Cupriavidus sp. BIS7	1217718	PRJNA171721	171721	Proteobacteria	Betaproteobacteria	5.87142	63.8	-	ALOU01	138	5321	5174	8/20/12	5/18/17	Contig	University of Malaya	SAMN02471864	GCA_000292345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/345/GCA_000292345.1_ASM29234v1	23115161	BIS7
Rodentibacter pneumotropicus	758	PRJNA343597	343597	Proteobacteria	Gammaproteobacteria	2.31983	39.9	-	MLHR01	93	2219	2089	2/15/17	4/6/17	Contig	University of Copenhagen	SAMN05898514	GCA_002000505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/505/GCA_002000505.1_ASM200050v1	-	Ac63
Sinorhizobium sp. LM21	1449788	PRJNA383473	383473	Proteobacteria	Alphaproteobacteria	7.64356	62.2	-	NEXT01	114	7349	7073	7/11/17	7/13/17	Contig	"University of Warsaw, Faculty of Biology, Institute of Microbiology"	SAMN06765771	GCA_002216665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/665/GCA_002216665.1_SLM21	-	LM21
Wohlfahrtiimonas chitiniclastica	400946	PRJNA382997	382997	Proteobacteria	Gammaproteobacteria	2.11224	43.7	-	NEFI01	8	2019	1952	8/15/17	8/17/17	Contig	Centers for Disease Control and Prevention	SAMN06758448	GCA_002252255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/255/GCA_002252255.1_ASM225225v1	-	F6514
Thioclava sp. F1Mire-8	1973006	PRJNA380870	380870	Proteobacteria	Alphaproteobacteria	3.8428	64.1	-	NBNY01	14	3672	3590	6/30/17	7/3/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN06650523	GCA_002213165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/165/GCA_002213165.1_ASM221316v1	-	F1Mire-8
Hyphomonas sp. BRH_c22	1629710	PRJNA257561	257561	Proteobacteria	Alphaproteobacteria	4.07035	60.9	-	LADU01	140	4032	3624	3/24/15	3/24/15	Contig	EPFL	SAMN03400152	GCA_000961795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/795/GCA_000961795.1_41k	-	-
Pseudoxanthomonas sp. CF125	1855303	PRJEB16289	348846	Proteobacteria	Gammaproteobacteria	4.21641	63.7	-	FNLD01	6	3748	3651	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216569	GCA_900104085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/085/GCA_900104085.1_IMG-taxon_2615840523_annotated_assembly	-	CF125
Halorubrum sp. SD683	1855873	PRJNA383329	383329	Euryarchaeota	Halobacteria	3.14599	69	-	NEWJ01	137	3203	2969	5/12/17	5/23/17	Scaffold	"University of Sevilla, Spain"	SAMN06761387	GCA_002135045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/045/GCA_002135045.1_ASM213504v1	-	SD683
Clostridium tyrobutyricum	1519	PRJNA267102	267102	Terrabacteria group	Firmicutes	3.08505	31	-	JTES01	62	3082	2926	1/8/15	4/2/17	Scaffold	Agroscope	SAMN03177791	GCA_000816635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/635/GCA_000816635.1_ASM81663v1	25767226	FAM22553
Limnohabitans sp. Rim47	1100721	PRJEB12250	308709	Proteobacteria	Betaproteobacteria	2.94233	59	-	FBYA01	9	2831	2756	1/14/16	4/11/17	Scaffold	UZH	SAMEA3719354	GCA_001517545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/545/GCA_001517545.1_Rim47_scaffolds	-	-
Oscillibacter sp. CAG:241_62_21	1897012	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.70437	62.2	-	MNTF01	27	1615	1534	12/23/16	12/23/16	Scaffold	None	SAMN05717289	GCA_001916855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/855/GCA_001916855.1_ASM191685v1	27819664	-
Mycobacterium fortuitum	1766	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.3325	66.2	-	LZIW01	201	6136	5854	6/17/16	4/5/17	Contig	JCVI	SAMN04634207	GCA_001666795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/795/GCA_001666795.1_ASM166679v1	-	E190
Aeromonas sp. EERV15	1833892	PRJEB13484	325473	Proteobacteria	Gammaproteobacteria	4.51696	58.2	-	FKKY02	207	4117	3925	6/13/16	4/13/17	Contig	Elham	SAMEA3932536	GCA_900079845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/845/GCA_900079845.2_Aeromonas_EERV15	-	-
Elizabethkingia meningoseptica	238	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	3.85648	36.4	-	MAHZ01	21	3466	3408	3/7/17	3/10/17	Contig	CDC	SAMN05281841	GCA_002023055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/055/GCA_002023055.1_ASM202305v1	-	G4076
Chryseobacterium indologenes	253	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.7978	37.2	-	DCFF01	24	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453766	GCA_002314375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/375/GCA_002314375.1_ASM231437v1	28894102	-
Pluralibacter gergoviae	61647	PRJNA329465	329465	Proteobacteria	Gammaproteobacteria	5.89025	58.4	-	MBGD01	87	5712	5419	11/1/16	4/5/17	Contig	University of Malaya	SAMN05413106	GCA_001858335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/335/GCA_001858335.1_ASM185833v1	-	C7B
Dickeya solani	1089444	PRJNA270493	270493	Proteobacteria	Gammaproteobacteria	4.87083	56.2	-	JWLT01	22	4269	4099	10/28/15	4/4/17	Scaffold	CNRS - UPR2355	SAMN03266542	GCA_001417915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/915/GCA_001417915.1_Dsl_1.0	26467299	PPO 9134
Blautia sp. Marseille-P2398	1805476	PRJEB13136	316093	Terrabacteria group	Firmicutes	3.5905	41.5	-	FJVH01	15	3302	3125	3/24/16	4/12/17	Contig	URMITE	SAMEA3905751	GCA_900078295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/295/GCA_900078295.1_PRJEB13136	-	Marseille-P2398
Gordonia sp. 852002-51296_SCH5728562-b	1834101	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.14053	65.3	-	LZMI01	137	4741	4463	6/17/16	4/13/17	Contig	JCVI	SAMN04692014	GCA_001665475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/475/GCA_001665475.1_ASM166547v1	-	852002-51296_SCH5728562-b
Anoxybacillus sp. 103	1919277	PRJNA353767	353767	Terrabacteria group	Firmicutes	2.7222	41.6	-	MQAD01	48	2869	2675	2/13/17	4/17/17	Scaffold	University of Bergen	SAMN06020137	GCA_001996285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/285/GCA_001996285.1_ASM199628v1	-	103
Massilia sp. 9096	1500894	PRJNA247912	247912	Proteobacteria	Betaproteobacteria	5.71028	65.7	-	JQNN01	2	5001	4793	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02787000	GCA_000745265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/265/GCA_000745265.1_ASM74526v1	-	9096
Pseudomonas protegens	380021	PRJNA327129	327129	Proteobacteria	Gammaproteobacteria	6.98454	63.4	-	MAUL01	10	6376	6253	7/10/16	4/5/17	Scaffold	Centro de Investigacion y de Estudios Avanzados del IPN	SAMN05302429	GCA_001682935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/935/GCA_001682935.1_ASM168293v1	-	PA12
Blastomonas sp. CCH2-E1	1768740	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	3.87945	64.4	-	LSHO01	108	3777	3656	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299411	GCA_001555805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/805/GCA_001555805.1_ASM155580v1	-	CCH2-E1
Citrobacter amalonaticus	35703	PRJEB8301	276431	Proteobacteria	Gammaproteobacteria	5.0341	53.9	-	CDQX01	914	5539	4314	2/24/15	4/4/17	Contig	CGS-GL	SAMEA3218000	GCA_001373155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/155/GCA_001373155.1_3e8B_assembly	-	3e8B
Porphyromonas gulae	111105	PRJNA253710	253710	FCB group	Bacteroidetes/Chlorobi group	2.28743	48.9	-	JRAL01	52	1991	1839	10/27/14	4/2/17	Contig	UC Davis	SAMN03002874	GCA_000768835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/835/GCA_000768835.1_ASM76883v1	25858832	COT-052 OH4119
Mycobacterium asiaticum	1790	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.77265	66.7	-	LZMH01	86	5395	5172	6/17/16	4/5/17	Contig	JCVI	SAMN04634183	GCA_001673635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/635/GCA_001673635.1_ASM167363v1	-	1275241.6
Streptococcus oralis subsp. tigurinus	1077464	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.95147	40.9	-	NCUG01	18	1931	1811	4/18/17	4/21/17	Contig	Slagelse Hospital	SAMN06705628	GCA_002096275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/275/GCA_002096275.1_ASM209627v1	27325438	OD_314165_09
Mycoplasma sp. Bg2	1784823	PRJNA309720	309720	Terrabacteria group	Tenericutes	0.698687	28.3	-	LSMY01	4	-	-	5/10/16	5/10/16	Contig	"Sanya Institute of Deep-sea Science and Engineering, Chinese Academy of Sciences"	SAMN04386406	GCA_001641225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/225/GCA_001641225.1_ASM164122v1	-	-
Raoultella ornithinolytica	54291	PRJNA390769	390769	Proteobacteria	Gammaproteobacteria	5.97091	55.4	-	NJBC01	89	5959	5621	6/21/17	6/24/17	Scaffold	University of Houston	SAMN07249869	GCA_002204595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/595/GCA_002204595.1_ASM220459v1	-	PX02
Brochothrix thermosphacta	2756	PRJNA338887	338887	Terrabacteria group	Firmicutes	2.5846	36.2	-	MDLR01	154	2447	2351	8/29/16	4/5/17	Contig	CSIRO Agriculture and Food; Food Safety and Stability Group	SAMN05567458	GCA_001715785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/785/GCA_001715785.1_ASM171578v1	-	Bth-7816
Pseudomonas lundensis	86185	PRJNA397499	397499	Proteobacteria	Gammaproteobacteria	4.95575	58.4	-	NQKF01	104	4578	4363	8/24/17	8/27/17	Scaffold	CSIRO Agriculture and Food	SAMN07459817	GCA_002269075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/075/GCA_002269075.1_ASM226907v1	-	L1817
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.79413	58.8	-	LNWF01	68	4596	4458	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339842	GCA_001681335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/335/GCA_001681335.1_ASM168133v1	-	F2596
Curtobacterium sp. ER1/6	1891920	PRJNA339451	339451	Terrabacteria group	Actinobacteria	3.36895	72.2	-	MJAK01	19	3179	3085	9/23/16	4/13/17	Contig	University of Sao Paulo	SAMN05591371	GCA_001742745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/745/GCA_001742745.1_ASM174274v1	-	ER1/6
Streptomyces rimosus subsp. rimosus	132474	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.41306	71.9	-	JOCM01	132	7429	7074	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645419	GCA_000718835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/835/GCA_000718835.1_ASM71883v1	-	NRRL WC-3876
Butyrivibrio sp. LC3010	1280680	PRJNA185715	185715	Terrabacteria group	Firmicutes	4.58827	39.6	-	AUJU01	66	4041	3852	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441480	GCA_000424385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/385/GCA_000424385.1_ASM42438v1	-	LC3010
Bifidobacterium pseudolongum	1694	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.82503	62.1	-	DBZP01	99	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06457169	GCA_002311215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/215/GCA_002311215.1_ASM231121v1	28894102	-
Ensifer sp. Root278	1736509	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	7.09546	62.1	-	LMJJ01	44	6778	6446	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155778	GCA_001429285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/285/GCA_001429285.1_Root278	26633631	Root278
Lysobacter sp. Root916	1736606	PRJNA297942	297942	Proteobacteria	Gammaproteobacteria	4.69428	68.4	-	LMJF01	18	4127	4012	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155875	GCA_001429785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/785/GCA_001429785.1_Root916	26633631	Root916
Leifsonia sp. Root112D2	1736426	PRJNA297942	297942	Terrabacteria group	Actinobacteria	3.4067	65.6	-	LMCU01	2	3188	3089	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155695	GCA_001424905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/905/GCA_001424905.1_Root112D2	26633631	Root112D2
Sphingopyxis sp. LC363	1120705	PRJNA248602	248602	Proteobacteria	Alphaproteobacteria	4.21076	65.2	-	JNFC01	73	3958	3834	9/22/14	4/9/17	Contig	Monash University Malaysia	SAMN02799687	GCA_000756385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/385/GCA_000756385.1_ASM75638v1	25377711	LC363
Halorubrum ezzemoulense	337243	PRJNA232799	232799	Euryarchaeota	Halobacteria	3.27496	67.7	-	NHPD01	73	3208	3017	8/15/17	8/17/17	Scaffold	University of Conn.	SAMN02716041	GCA_002252875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/875/GCA_002252875.1_ASM225287v1	24782836	Ec15
Kocuria sp. CNJ-770	1904964	PRJNA344658	344658	Terrabacteria group	Actinobacteria	4.12308	72.3	-	MKJW01	166	3803	3221	1/11/17	4/17/17	Scaffold	"Scripps Institution of Oceanography, UCSD"	SAMN05830205	GCA_001942375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/375/GCA_001942375.1_ASM194237v1	27902408	CNJ-770
Pseudomonas denitrificans (nomen rejiciendum)	43306	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.33905	66.5	-	JVSJ01	80	5971	5815	7/10/15	5/30/17	Scaffold	University of Washington	SAMN03197337	GCA_001062785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/785/GCA_001062785.1_ASM106278v1	26230489	148_PDEN
Helicobacter sp. TUL	1848928	PRJNA384293	384293	Proteobacteria	delta/epsilon subdivisions	1.70826	37.8	-	NESU01	43	1737	1621	9/6/17	9/8/17	Contig	Genomic Research Laboratory (GRL)	SAMN06841404	GCA_002287135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/135/GCA_002287135.1_ASM228713v1	-	TUL
Bordetella hinzii 4161	1331256	PRJNA202159	202159	Proteobacteria	Betaproteobacteria	4.86137	67	-	JHER01	58	4567	4410	4/30/14	4/2/17	Contig	JCVI	SAMN02263901	GCA_000657775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/775/GCA_000657775.1_gbh01v01	-	4161
Faecalibacterium sp. CAG:82-related_59_9	1897006	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.77327	59.2	-	MNSO01	260	1863	1225	12/23/16	12/23/16	Scaffold	None	SAMN05717272	GCA_001916495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/495/GCA_001916495.1_ASM191649v1	27819664	-
Serratia fonticola	47917	PRJNA338688	338688	Proteobacteria	Gammaproteobacteria	5.68896	53.9	-	MDJO01	51	5254	5080	11/17/16	4/6/17	Scaffold	New Mexico State University	SAMN05560667	GCA_001880985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/985/GCA_001880985.1_ASM188098v1	-	AeS1
Vibrio owensii	696485	PRJDB3039	271954	Proteobacteria	Gammaproteobacteria	5.87115	45.5	-	BBKN01	233	5349	5132	1/7/15	4/2/17	Contig	University of Miyazaki	SAMD00019139	GCA_000818255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/255/GCA_000818255.1_V_owensii_47666-1_1.0	25527835	47666-1
Enhydrobacter sp. UBA4390	1946461	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.38362	43.8	-	DGRK01	37	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450362	GCA_002389945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/945/GCA_002389945.1_ASM238994v1	28894102	-
Roseburia sp. CAG:100	1262940	PRJEB674	206593	Terrabacteria group	Firmicutes	3.24693	41.5	-	CBKV01	176	2924	2901	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138732	GCA_000436955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/955/GCA_000436955.1_MGS100	-	-
Acetobacter sp. CAG:977	1262685	PRJEB1044	206951	Proteobacteria	Alphaproteobacteria	1.92619	47.8	-	CAZQ01	38	1819	1775	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138602	GCA_000434295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/295/GCA_000434295.1_MGS977	-	-
Pantoea dispersa	59814	PRJNA278252	278252	Proteobacteria	Gammaproteobacteria	4.94953	57.8	-	LDSC01	194	4550	4399	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401417	GCA_001477165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/165/GCA_001477165.1_ASM147716v1	26793183	RSA31
Pseudobutyrivibrio sp. NOR37	1798168	PRJEB17246	351424	Terrabacteria group	Firmicutes	2.9452	38.8	-	FOZB01	8	2713	2638	11/1/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487829	GCA_900112855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/855/GCA_900112855.1_IMG-taxon_2606217811_annotated_assembly	-	NOR37
Smithella sp. UBA4047	1961383	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.75157	43.3	-	DFZV01	118	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457342	GCA_002382135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/135/GCA_002382135.1_ASM238213v1	28894102	-
Salinivibrio sp. ML328A	1909476	PRJNA368695	368695	Proteobacteria	Gammaproteobacteria	3.39289	50.6	-	MUEU01	70	3120	3001	2/14/17	4/17/17	Contig	Universidad de Sevilla	SAMN06270209	GCA_001995725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/725/GCA_001995725.1_ASM199572v1	-	ML328A
Candidatus Synechococcus spongiarum LMB bulk15M	1943582	PRJNA239126	239126	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.50051	60	-	MWLD01	84	1515	1416	3/3/17	3/3/17	Scaffold	DOE Joint Genome Institute	SAMN02745638	GCA_002018045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/045/GCA_002018045.1_ASM201804v1	-	-
Staphylococcus cohnii	29382	PRJNA263230	263230	Terrabacteria group	Firmicutes	2.57797	32.3	-	JRVW01	89	2493	2345	11/10/16	4/10/17	Contig	CSIR-Institute of Microbial Technology	SAMN03097239	GCA_001876735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/735/GCA_001876735.1_ASM187673v1	-	SE4.2
Leptolyngbya sp. PCC 7376	111781	PRJNA43487	43487	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.12595	43.9	chromosome:NC_019683.1/CP003946.1	-	1	4578	4167	12/4/12	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02232033	GCA_000316605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/605/GCA_000316605.1_ASM31660v1	-	-
Candidatus Accumulibacter sp. 66-26	1895689	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	4.38544	66.1	-	MKUH01	46	3980	3869	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660576	GCA_001897745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/745/GCA_001897745.1_ASM189774v1	-	-
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.8474	35.3	-	LZGW01	61	2680	2511	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179621	GCA_001690275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/275/GCA_001690275.1_ASM169027v1	-	WF3-4
Lysinibacillus sp. AR18-8	1889781	PRJNA338661	338661	Terrabacteria group	Firmicutes	4.6849	37.4	-	MDGU01	54	4660	4539	8/16/16	4/13/17	Scaffold	New Mexico State University	SAMN05560414	GCA_001705465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/465/GCA_001705465.1_ASM170546v1	-	AR18-8
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.07263	42.1	-	FTQH01	9	970	900	3/18/17	3/24/17	Contig	Functional Genomics Genter Zurich	SAMEA4555944	GCA_900149425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/425/GCA_900149425.1_17-23b	-	-
Lactobacillus kunkeei	148814	PRJNA253911	253911	Terrabacteria group	Firmicutes	1.55161	36.9	-	JPYX01	21	1458	1374	1/30/15	4/3/17	Contig	Norwegian University of Life Sciences	SAMN02981005	GCA_000830375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/375/GCA_000830375.1_ASM83037v1	-	AR114
Devosia sp. DBB001	1380412	PRJEB4658	237151	Proteobacteria	Alphaproteobacteria	4.66946	64	-	CCAO01	95	4548	4418	5/2/14	4/9/17	Contig	IBVA	SAMEA3139013	GCA_000689495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/495/GCA_000689495.1_DevNy.1	-	DDB001
Bosea sp. LC85	1502851	PRJNA248600	248600	Proteobacteria	Alphaproteobacteria	6.56403	64.9	-	JPKG01	74	6185	6027	7/28/14	4/9/17	Contig	Monash University Malaysia	SAMN02799685	GCA_000735605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/605/GCA_000735605.1_ASM73560v1	25377711	LC85
Hymenobacter sp. CCM 8682	2006685	PRJNA388853	388853	FCB group	Bacteroidetes/Chlorobi group	4.58224	60.3	-	NIRR01	131	4022	3854	6/21/17	6/24/17	Contig	Masaryk University	SAMN07187781	GCA_002204745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/745/GCA_002204745.1_ASM220474v1	-	CCM 8682
Vibrio metoecus	1481663	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	4.09831	46.8	-	NMST01	81	3998	3801	8/31/17	9/2/17	Contig	University of Alberta	SAMN07350489	GCA_002284005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/005/GCA_002284005.1_ASM228400v1	-	OYP4E03
Luteibacter sp. 22Crub2.1	1283288	PRJEB19697	377485	Proteobacteria	Gammaproteobacteria	4.58904	64.8	-	FUYT01	34	4098	3975	3/8/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660880	GCA_900167995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/995/GCA_900167995.1_IMG-taxon_2519899668_annotated_assembly	-	22Crub2.1
Sulfuricurvum sp. RIFCSPLOWO2_12_43_5	1802246	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	0.951418	42.6	-	MIBS01	523	1221	828	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313804	GCA_001830715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/715/GCA_001830715.1_ASM183071v1	27774985	-
Klebsiella michiganensis	1134687	PRJNA52153	52153	Proteobacteria	Gammaproteobacteria	6.12154	55.2	-	AGDP01	3	5852	5572	2/17/12	2/20/17	Scaffold	Broad Institute	SAMN02463898	GCA_000247915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/915/GCA_000247915.1_Kleb_oxyt_10-5250_V1	-	Oct-50
Achromobacter sp. HMSC18C08	1581052	PRJNA269806	269806	Proteobacteria	Betaproteobacteria	6.84403	67.2	-	LWPU01	1012	6714	5871	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436202	GCA_001815885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/885/GCA_001815885.1_ASM181588v1	-	HMSC18C08
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	7.06316	43.6	-	MPTD01	80	6189	6010	1/18/17	4/6/17	Contig	Cornell University	SAMN05772538	GCA_001954445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/445/GCA_001954445.1_ASM195444v1	-	FSL R5-0923
Elizabethkingia miricola	172045	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	4.27041	35.9	-	MAHY01	15	3923	3828	3/8/17	3/10/17	Contig	CDC	SAMN05277881	GCA_002023685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/685/GCA_002023685.1_ASM202368v1	-	G4074
Bacillus aryabhattai	412384	PRJNA388465	388465	Terrabacteria group	Firmicutes	5.58452	37.7	-	NHZZ01	118	5718	5523	6/7/17	6/28/17	Contig	TRC-Oman	SAMN07177539	GCA_002208605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/605/GCA_002208605.1_ASM220860v1	-	SQU-R12
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.36975	51.2	-	MPQV01	67	2332	2237	3/6/17	3/9/17	Contig	Harvard University	SAMN06016268	GCA_002020725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/725/GCA_002020725.1_ASM202072v1	-	-
Citrobacter braakii	57706	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.08687	51.8	-	JUYY01	108	4949	4735	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197842	GCA_001065805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/805/GCA_001065805.1_ASM106580v1	26230489	641_SENT
Clostridium baratii	1561	PRJNA343441	343441	Terrabacteria group	Firmicutes	3.05825	28	-	MJHL01	29	2947	2822	3/14/17	3/16/17	Scaffold	Institut Pasteur	SAMN05788111	GCA_002025815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/815/GCA_002025815.1_ASM202581v1	-	693-15
Leisingera sp. ANG-M7	1577902	PRJNA269051	269051	Proteobacteria	Alphaproteobacteria	4.58225	62.4	-	JWLI01	58	4399	4288	1/2/15	4/10/17	Scaffold	University of Connecticut	SAMN03246065	GCA_000813965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/965/GCA_000813965.1_ASM81396v1	25755651	ANG-M7
Enterobacter ludwigii	299767	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.92473	54.5	-	LVTW01	92	4883	4613	4/25/16	4/5/17	Contig	JCVI	SAMN04572595	GCA_001631555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/555/GCA_001631555.1_ASM163155v1	-	GN04920
Frigoribacterium sp. Leaf263	1736313	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.24357	71.2	-	LMMO01	10	3049	2964	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151703	GCA_001422285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/285/GCA_001422285.1_Leaf263	26633631	Leaf263
Mycobacterium immunogenum	83262	PRJNA294421	294421	Terrabacteria group	Actinobacteria	5.98857	64.1	-	LJFT01	91	6089	5819	9/22/15	4/4/17	Contig	US EPA	SAMN04025497	GCA_001296345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/345/GCA_001296345.1_ASM129634v1	26744376	H088
Moritella viscosa	80854	PRJEB16014	348508	Proteobacteria	Gammaproteobacteria	5.16708	39	-	FRDQ01	169	4682	4409	12/6/16	4/11/17	Contig	UNIVERSITY OF TROMSO	SAMEA4520412	GCA_900120105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/105/GCA_900120105.1_clc.v6.5.Vvi-11.01	-	-
Vulcanisaeta sp. MG_3	1714250	PRJNA295311	295311	TACK group	Crenarchaeota	1.05403	45.7	-	LOCH01	164	1210	953	1/15/16	1/15/16	Scaffold	Montana State University	SAMN04045672	GCA_001516765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/765/GCA_001516765.1_ASM151676v1	-	-
Staphylococcus argenteus	985002	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.78907	32.3	-	JVUX01	111	2769	2614	7/10/15	4/3/17	Contig	University of Washington	SAMN03197271	GCA_001061465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/465/GCA_001061465.1_ASM106146v1	26230489	1299_SAUR
Klebsiella quasipneumoniae	1463165	PRJNA398723	398723	Proteobacteria	Gammaproteobacteria	6.37075	56.5	-	NQYU01	1548	6693	5372	9/4/17	9/4/17	Scaffold	Christian Medical College	SAMN07515803	GCA_002285205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/205/GCA_002285205.1_ASM228520v1	-	CR34
Lactobacillus acetotolerans	1600	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.39562	35.2	-	DGZI01	102	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450880	GCA_002397045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/045/GCA_002397045.1_ASM239704v1	28894102	-
Mycobacterium conceptionense	451644	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.16253	66.6	-	MBGF01	138	5940	5732	1/18/17	4/6/17	Contig	JCVI	SAMN04634281	GCA_001954205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/205/GCA_001954205.1_ASM195420v1	-	IS-1222
Lactobacillus agilis	1601	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.19599	41.4	-	LUGQ01	119	2230	2011	8/1/17	8/3/17	Scaffold	University of Minnesota	SAMN04498967	GCA_002237875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/875/GCA_002237875.1_ASM223787v1	-	UMNLA3
Mycobacterium chimaera	222805	PRJNA294775	294775	Terrabacteria group	Actinobacteria	6.08705	67.6	-	LJHL01	247	5786	5451	10/6/15	4/11/17	Contig	Trinity College Dublin	SAMN04032784	GCA_001307335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/335/GCA_001307335.1_ASM130733v1	26634757	MCIMRL2
Duganella sp. OV458	1855290	PRJEB15879	347943	Proteobacteria	Betaproteobacteria	6.42224	62.2	-	FNCD01	23	5841	5666	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216320	GCA_900100675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/675/GCA_900100675.1_IMG-taxon_2609459727_annotated_assembly	-	OV458
Kocuria kristinae	37923	PRJNA278413	278413	Terrabacteria group	Actinobacteria	2.21695	71.8	-	LDRI01	175	1997	1844	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401337	GCA_001477035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/035/GCA_001477035.1_ASM147703v1	26793183	SA14
Aureimonas sp. AU4	1638163	PRJDB3816	300645	Proteobacteria	Alphaproteobacteria	4.4961	68.7	-	BBWK01	141	4288	4119	11/7/15	4/11/17	Contig	"Graduate School of Life Sciences, Tohoku University"	SAMD00028758	GCA_001463765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/765/GCA_001463765.1_ASM146376v1	26534993	AU4
Phenylobacterium sp. RIFCSPHIGHO2_01_FULL_69_31	1801944	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	4.87716	69.4	-	MHXN01	46	4760	4653	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314943	GCA_001824475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/824/475/GCA_001824475.1_ASM182447v1	27774985	-
Lactobacillus parabuchneri	152331	PRJNA357007	357007	Terrabacteria group	Firmicutes	2.67213	43.3	-	MSAT01	63	2578	2403	4/18/17	4/21/17	Scaffold	University of Bern	SAMN06130974	GCA_002095615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/615/GCA_002095615.1_ASM209561v1	28261177	FAM21823
Lactobacillus taiwanensis	508451	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.07281	34	-	NGOC01	99	2040	1828	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848428	GCA_002253195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/195/GCA_002253195.1_ASM225319v1	-	601a
Lactobacillus aviarius	1606	PRJNA316009	316009	Terrabacteria group	Firmicutes	1.62493	40.2	-	LVKC01	60	1568	1472	5/25/16	4/5/17	Scaffold	University of Minnesota	SAMN04573021	GCA_001652055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/055/GCA_001652055.1_ASM165205v1	-	UMNLAv1
Bacillus paralicheniformis	1648923	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.51067	45.4	-	NPCO01	83	4659	4443	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372716	GCA_002271505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/505/GCA_002271505.1_assembly-7704_v1	-	7704
Acidimicrobium sp. UBA4028	1945923	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.446	48.3	-	DGAO01	175	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457596	GCA_002382415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/415/GCA_002382415.1_ASM238241v1	28894102	-
Nitrospira sp. ST-bin5	1978765	PRJNA315256	315256	Nitrospirae	Nitrospira	4.00938	58	-	MSXN01	29	3975	3845	4/10/17	4/24/17	Scaffold	The University Hong Kong	SAMN06189318	GCA_002083555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/555/GCA_002083555.1_ASM208355v1	28390307	-
Enterobacter kobei	208224	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.71553	54.7	-	LEDW02	22	4506	4337	6/9/15	4/5/17	Contig	JCVI	SAMN03732707	GCA_001022445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/445/GCA_001022445.2_Assembly_of_colistin-resistant_Enterobacter_cloacae_strain	-	GN02454
Bacillus subtilis BEST7003	1204342	PRJDB111	231327	Terrabacteria group	Firmicutes	4.04304	43.9	chromosome:NZ_AP012496.1/AP012496.1	-	1	4201	4023	10/3/12	3/24/17	Complete Genome	"Department of Bioscience, Tokyo University of Agriculture"	SAMD00061007	GCA_000523045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/045/GCA_000523045.1_ASM52304v1	23209249	BEST7003
Enterobacter xiangfangensis	1296536	PRJNA278240	278240	Proteobacteria	Gammaproteobacteria	4.7253	55.4	-	LDQO01	30	4526	4345	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401405	GCA_001476035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/035/GCA_001476035.1_ASM147603v1	26793183	NS371
Halothiobacillus sp. 14-55-98	1970380	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	2.02202	54.8	-	NCKJ01	233	1985	1887	8/16/17	8/16/17	Scaffold	None	SAMN06622193	GCA_002279115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/115/GCA_002279115.1_ASM227911v1	-	-
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.01453	66.6	-	LOYQ01	75	6404	6075	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449300	GCA_001526385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/385/GCA_001526385.1_ASM152638v1	-	MSMB1836
Burkholderia diffusa	488732	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.91568	66.4	-	LPJV01	70	6378	6078	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449600	GCA_001532105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/105/GCA_001532105.1_ASM153210v1	-	MSMB378WGS
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.88769	67.5	-	LOZB01	91	7210	6848	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449311	GCA_001527305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/305/GCA_001527305.1_ASM152730v1	-	MSMB2053
Burkholderia pseudomultivorans	1207504	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.79651	67.4	-	LPLB01	90	7133	6840	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449634	GCA_001533465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/465/GCA_001533465.1_ASM153346v1	-	MSMB725WGS
Candidatus Kryptonium thompsoni	1633631	PRJNA279021	279021	FCB group	Candidatus Kryptonia	2.59269	37.4	-	LDXX01	18	-	-	11/12/15	11/12/15	Contig	DOE Joint Genome Institute	SAMN03436306	GCA_001442925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/925/GCA_001442925.1_ASM144292v1	-	-
Porphyrobacter donghaensis	267135	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	3.8273	66.7	-	LSJS01	325	3724	3464	2/10/16	4/4/17	Contig	Georgia Institute of Technology	SAMN04299469	GCA_001557325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/325/GCA_001557325.1_ASM155732v1	-	CCH17-B8
Enterobacter cloacae complex 'Hoffmann cluster IV'	1812935	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.11669	55.3	-	LVTQ01	290	5297	4810	4/25/16	4/20/17	Contig	JCVI	SAMN04578339	GCA_001631535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/535/GCA_001631535.1_ASM163153v1	-	GN04673
Enterobacter cloacae complex 'Hoffmann cluster III'	1812934	PRJNA382335	382335	Proteobacteria	Gammaproteobacteria	4.70139	55.1	-	NIZG01	128	4605	4372	6/22/17	6/24/17	Contig	"Austrian Agency for Health and Food Safety, Vienna, Austria"	SAMN06704511	GCA_002204935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/935/GCA_002204935.1_ASM220493v1	-	2845
Polynucleobacter sp. AP-Melu-1000-B4	1938814	PRJEB25212	399683	Proteobacteria	Betaproteobacteria	1.88556	46.6	-	OANS01	11	2010	1946	8/26/17	8/26/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06295945	GCA_900205755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/205/755/GCA_900205755.1_IMG-taxon_2710724120_annotated_assembly	-	AP-Melu-1000-B4
Oleiphilus sp. HI0061	1822239	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	5.09527	44.4	-	LWFE01	1885	4882	4099	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580778	GCA_001635675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/675/GCA_001635675.1_ASM163567v1	-	HI0061
Thalassolituus sp. UBA1520	1947654	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.9738	43.7	-	DCQK01	303	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457818	GCA_002323455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/455/GCA_002323455.1_ASM232345v1	28894102	-
Polynucleobacter asymbioticus	576611	PRJNA295639	295639	Proteobacteria	Betaproteobacteria	2.16565	44.8	-	LVLD01	19	2184	2119	11/7/16	4/5/17	Contig	University of Innsbruck	SAMN04086671	GCA_001870405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/405/GCA_001870405.1_ASM187040v1	-	P1-KOL8
Eikenella sp. NML120348	1795831	PRJNA310649	310649	Proteobacteria	Betaproteobacteria	1.91114	55.5	-	LXSP01	12	1925	1752	5/19/16	4/12/17	Contig	Public Health Agency of Canada	SAMN04931640	GCA_001648435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/435/GCA_001648435.1_ASM164843v1	-	NML120348
Lachnoclostridium sp. An118	1965547	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.46751	52.3	-	NFLQ01	58	3321	3170	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473590	GCA_002160985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/985/GCA_002160985.1_ASM216098v1	-	An118
Gilliamella sp. A-TSA2	1970467	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.46216	34.8	-	NASP01	72	2237	2158	5/16/17	5/24/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603540	GCA_002142055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/055/GCA_002142055.1_ASM214205v1	-	A-TSA2
Lachnospira sp. UBA3833	1946718	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.61733	36.7	-	DGIB01	5	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451311	GCA_002393145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/145/GCA_002393145.1_ASM239314v1	28894102	-
Bacillus wiedmannii	1890302	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.59086	35.2	-	LXFR01	92	6024	5665	5/17/16	4/5/17	Contig	Cornell University	SAMN04909729	GCA_001645525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/525/GCA_001645525.1_ASM164552v1	-	FSL P2-0415
Flavonifractor sp. An10	1965537	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.88297	61.7	-	NFMB01	15	3714	3514	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473570	GCA_002161215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/215/GCA_002161215.1_ASM216121v1	-	An10
Thiobacillus sp. 65-1059	1895860	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	2.90602	65.1	-	MKUE01	143	2960	2769	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660573	GCA_001897675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/675/GCA_001897675.1_ASM189767v1	-	-
Halanaerobium congolense	54121	PRJEB18414	355828	Terrabacteria group	Firmicutes	2.6572	33.3	-	FRCV01	62	2582	2410	12/2/16	4/6/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04515650	GCA_900143045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/045/GCA_900143045.1_IMG-taxon_2642422586_annotated_assembly	-	101214
Bradyrhizobium canariense	255045	PRJNA355581	355581	Proteobacteria	Alphaproteobacteria	8.21478	63.1	-	NAFC01	177	7849	7317	4/24/17	8/7/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN06077200	GCA_002108825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/825/GCA_002108825.1_ASM210882v1	28729275	UBMA122
Terribacillus saccharophilus	361277	PRJNA395369	395369	Terrabacteria group	Firmicutes	3.56601	42.8	-	NPBD01	38	3589	3499	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372673	GCA_002272745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/745/GCA_002272745.1_assembly-7503-2_v1	-	7503-2
Aminobacterium sp. UBA4934	1946026	PRJNA348753	348753	Synergistetes	Synergistia	1.94831	43.6	-	DHBG01	17	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454916	GCA_002397715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/715/GCA_002397715.1_ASM239771v1	28894102	-
Fibrobacter sp. UWS1	1896220	PRJNA340554	340554	FCB group	Fibrobacteres	3.38	48.1	-	NSGW01	2	3030	2878	9/13/17	9/15/17	Contig	DOE Joint Genome Institute	SAMN05720768	GCA_002300445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/445/GCA_002300445.1_ASM230044v1	-	UWS1
Archaeoglobus sp. JdFR-36	1934993	PRJNA269163	269163	Euryarchaeota	Archaeoglobi	0.581015	40.5	-	MTMX01	75	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226353	GCA_002010225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/225/GCA_002010225.1_ASM201022v1	28350381	-
Campylobacter pinnipediorum subsp. pinnipediorum	1660067	PRJNA329203	329203	Proteobacteria	delta/epsilon subdivisions	1.71742	30.2	-	MCRK01	46	1743	1648	3/6/17	3/8/17	Contig	Utrecht University	SAMN05513627	GCA_002019815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/815/GCA_002019815.1_ASM201981v1	-	1105248
Xanthomonas axonopodis pv. manihotis str. NG1	1185701	PRJNA163797	163797	Proteobacteria	Gammaproteobacteria	4.73772	64.9	-	AKEG01	785	4557	3728	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090337	GCA_000265705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/705/GCA_000265705.1_NG1	22699502	NG1
Catabacter sp. UBA765	1946298	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.46279	49.1	-	DBJX01	38	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452384	GCA_002298445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/445/GCA_002298445.1_ASM229844v1	28894102	-
Candidatus Microthrix sp. UBA722	1946201	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.94122	63.7	-	DBLO01	219	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452892	GCA_002298755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/755/GCA_002298755.1_ASM229875v1	28894102	-
Faecalitalea sp. UBA4241	1946515	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.57947	38.2	-	DGXD01	154	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455946	GCA_002395495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/495/GCA_002395495.1_ASM239549v1	28894102	-
Empedobacter sp. UBA1863	1946431	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.09418	31.5	-	DDHZ01	94	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451464	GCA_002353015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/015/GCA_002353015.1_ASM235301v1	28894102	-
Gammaproteobacteria bacterium	1913989	PRJNA391950	391950	Proteobacteria	Gammaproteobacteria	2.02424	45.5	-	NVRQ01	47	2013	1918	9/28/17	9/28/17	Scaffold	University of Southern California	SAMN07568977	GCA_002400905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/905/GCA_002400905.1_ASM240090v1	-	-
Solobacterium sp. UBA2814	1947459	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.32988	50.2	-	DEGY01	69	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451521	GCA_002351655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/351/655/GCA_002351655.1_ASM235165v1	28894102	-
Gammaproteobacteria bacterium	1913989	PRJNA391950	391950	Proteobacteria	Gammaproteobacteria	3.22785	36.5	-	NVTW01	67	2836	2665	9/28/17	9/28/17	Scaffold	University of Southern California	SAMN07568919	GCA_002401725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/401/725/GCA_002401725.1_ASM240172v1	-	-
Faecalitalea sp. UBA4271	1946516	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.75326	38	-	DGVZ01	143	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452399	GCA_002396425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/425/GCA_002396425.1_ASM239642v1	28894102	-
Candidatus Microthrix sp. UBA672	1946197	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.56932	40.2	-	DBNM01	178	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455249	GCA_002299135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/135/GCA_002299135.1_ASM229913v1	28894102	-
Catabacter sp. UBA1385	1946244	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.0287	61.3	-	DBQV01	72	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06456168	GCA_002305755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/755/GCA_002305755.1_ASM230575v1	28894102	-
Xanthomonas axonopodis pv. manihotis str. IBSBF 356	1185695	PRJNA163785	163785	Proteobacteria	Gammaproteobacteria	4.84708	65.1	-	AKEA01	130	4289	3971	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090331	GCA_000265725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/725/GCA_000265725.1_IBSBF356	22699502	IBSBF 356
Campylobacter pinnipediorum subsp. caledonicus	1874362	PRJNA329203	329203	Proteobacteria	delta/epsilon subdivisions	1.67291	30.2	-	MBGA01	66	1658	1567	3/6/17	3/8/17	Contig	Utrecht University	SAMN05393167	GCA_002019825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/825/GCA_002019825.1_ASM201982v1	-	M203/00/3
Archaeoglobus sp. JdFR-40	1934997	PRJNA269163	269163	Euryarchaeota	Archaeoglobi	0.530115	42.6	-	MTNB01	76	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226357	GCA_002010275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/275/GCA_002010275.1_ASM201027v1	28350381	-
Fibrobacter sp. NR9	1896200	PRJNA340534	340534	FCB group	Fibrobacteres	3.39089	47.9	-	NSGY01	1	3072	2895	9/13/17	9/15/17	Contig	DOE Joint Genome Institute	SAMN05720488	GCA_002300465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/465/GCA_002300465.1_ASM230046v1	-	NR9
Aminobacterium sp. UBA4919	1946025	PRJNA348753	348753	Synergistetes	Synergistia	1.66661	44.1	-	DHBV01	177	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454678	GCA_002397995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/995/GCA_002397995.1_ASM239799v1	28894102	-
Terribacillus saccharophilus	361277	PRJNA390008	390008	Terrabacteria group	Firmicutes	4.70318	38.9	-	NISM01	2	-	-	9/21/17	9/23/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN07212049	GCA_002335735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/735/GCA_002335735.1_ASM233573v1	-	DSM 21619
Bradyrhizobium canariense	255045	PRJNA355585	355585	Proteobacteria	Alphaproteobacteria	8.21664	63	-	NAFF01	114	7818	7333	4/24/17	8/7/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN06080266	GCA_002108845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/845/GCA_002108845.1_ASM210884v1	28729275	UBMA182
Thiobacillus sp. 65-1402	1895861	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	3.10034	64.7	-	MKUG01	222	3204	2924	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660575	GCA_001897685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/685/GCA_001897685.1_ASM189768v1	-	-
Flavonifractor sp. An9	1965664	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.35023	58.2	-	NFHC01	58	3304	3127	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473768	GCA_002161245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/245/GCA_002161245.1_ASM216124v1	-	An9
Bacillus wiedmannii	1890302	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.55935	35.1	-	LXFS01	100	5913	5562	5/17/16	4/5/17	Contig	Cornell University	SAMN04909730	GCA_001645535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/535/GCA_001645535.1_ASM164553v1	-	FSL P2-0558
Lachnospira sp. UBA4346	1946724	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.71841	37.5	-	DGTC01	69	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454393	GCA_002394205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/205/GCA_002394205.1_ASM239420v1	28894102	-
Gilliamella sp. A-TSA3	1970468	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.46721	34.8	-	NASQ01	77	2240	2161	5/16/17	5/24/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603541	GCA_002142065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/065/GCA_002142065.1_ASM214206v1	-	A-TSA3
Lachnoclostridium sp. An76	1965654	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.43106	50.3	-	NFHL01	26	3144	2978	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473755	GCA_002161355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/355/GCA_002161355.1_ASM216135v1	-	An76
Eikenella sp. NML130454	1795832	PRJNA310649	310649	Proteobacteria	Betaproteobacteria	2.5456	56.3	-	LXSQ01	33	2582	2426	5/19/16	4/12/17	Contig	Public Health Agency of Canada	SAMN04931641	GCA_001648475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/475/GCA_001648475.1_ASM164847v1	-	NML130454
Thalassolituus sp. UBA1505	1947653	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.24847	51.9	-	DCQZ01	230	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456431	GCA_002324005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/005/GCA_002324005.1_ASM232400v1	28894102	-
Oleiphilus sp. HI0066	1822242	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	5.04487	44.4	-	LWFH01	1887	4871	4169	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580781	GCA_001635725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/725/GCA_001635725.1_ASM163572v1	-	HI0066
Polynucleobacter sp. GWA2_45_21	1801989	PRJNA288027	288027	Proteobacteria	Betaproteobacteria	2.11293	45.6	-	MHZG01	19	2170	2116	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313895	GCA_001830325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/325/GCA_001830325.1_ASM183032v1	27774985	-
Enterobacter cloacae complex 'Hoffmann cluster III'	1812934	PRJNA382335	382335	Proteobacteria	Gammaproteobacteria	4.72214	55.1	-	NIZH01	187	4632	4387	6/22/17	6/24/17	Contig	"Austrian Agency for Health and Food Safety, Vienna, Austria"	SAMN06704512	GCA_002204945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/945/GCA_002204945.1_ASM220494v1	-	10_14_15
Enterobacter cloacae complex 'Hoffmann cluster IV'	1812935	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.75773	56.1	-	LVTP01	147	4707	4379	4/25/16	4/20/17	Contig	JCVI	SAMN04578338	GCA_001631695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/695/GCA_001631695.1_ASM163169v1	-	GN04609
Porphyrobacter donghaensis	267135	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	3.75471	67	-	LSKM01	266	3706	3467	2/10/16	4/4/17	Contig	Georgia Institute of Technology	SAMN04299489	GCA_001557455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/455/GCA_001557455.1_ASM155745v1	-	CCH7-E3
Candidatus Kryptonium thompsoni	1633631	PRJNA278994	278994	FCB group	Candidatus Kryptonia	2.08493	37.4	-	LDXY01	142	-	-	11/12/15	11/12/15	Scaffold	DOE Joint Genome Institute	SAMN03436041	GCA_001442935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/935/GCA_001442935.1_ASM144293v1	-	-
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.76365	67.6	-	LOZN01	91	7053	6698	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449323	GCA_001527545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/545/GCA_001527545.1_ASM152754v1	-	MSMB1147
Burkholderia diffusa	488732	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.91625	66.4	-	LPJT01	67	6385	6084	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449598	GCA_001532285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/285/GCA_001532285.1_ASM153228v1	-	MSMB376WGS
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.90184	66.7	-	LOYR01	66	6333	6037	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449301	GCA_001526405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/405/GCA_001526405.1_ASM152640v1	-	MSMB1837
Halothiobacillus sp. 13-55-115	1970378	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	2.20998	55.4	-	NCKQ01	353	2259	2133	8/16/17	8/16/17	Scaffold	None	SAMN06622186	GCA_002279175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/175/GCA_002279175.1_ASM227917v1	-	-
Enterobacter xiangfangensis	1296536	PRJNA278430	278430	Proteobacteria	Gammaproteobacteria	4.73023	55.4	-	LDQQ01	44	4542	4346	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401402	GCA_001476055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/055/GCA_001476055.1_ASM147605v1	26793183	NS57
Bacillus sp. JS	1127744	PRJNA79217	79217	Terrabacteria group	Firmicutes	4.12041	43.9	chromosome:NC_017743.1/CP003492.1	-	1	4185	3975	4/20/12	6/15/17	Complete Genome	Korea Research Institute of Bioscience and Biotechnology	SAMN02603480	GCA_000259365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/365/GCA_000259365.1_ASM25936v1	22740679	JS
Enterobacter kobei	208224	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.06205	54.8	-	LEDC01	90	4969	4753	6/9/15	4/3/17	Contig	JCVI	SAMN03732729	GCA_001022915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/915/GCA_001022915.1_ASM102291v1	-	GN02825
Nitrospira sp. ST-bin4	1978764	PRJNA315256	315256	Nitrospirae	Nitrospira	2.93589	56.8	-	MSXM01	117	2952	2804	4/10/17	4/24/17	Scaffold	The University Hong Kong	SAMN06189317	GCA_002083565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/565/GCA_002083565.1_ASM208356v1	28390307	-
Acidimicrobium sp. UBA4025	1945922	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.67137	50.2	-	DGAR01	112	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457603	GCA_002382455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/455/GCA_002382455.1_ASM238245v1	28894102	-
Bacillus paralicheniformis G-1	1413213	PRJNA224947	224947	Terrabacteria group	Firmicutes	4.43023	45.7957	plasmid pFL7:NZ_AZSK01000037.1/AZSK01000037.1	AZSK01	37	4469	4269	3/28/14	4/18/17	Scaffold	"School of Agriculture and Food sciences, The University of Queensland"	SAMN02385726	GCA_000604165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/165/GCA_000604165.1_Bacillus_licheniformis_strain_G-1	24657871	G-1
Lactobacillus aviarius	1606	PRJNA316009	316009	Terrabacteria group	Firmicutes	1.63929	40.2	-	LVKE01	70	1557	1476	5/25/16	4/5/17	Scaffold	University of Minnesota	SAMN04573023	GCA_001652105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/105/GCA_001652105.1_ASM165210v1	-	UMNLAv3
Lactobacillus taiwanensis	508451	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.16511	34.1	-	NGOJ01	116	2164	1903	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848421	GCA_002253265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/265/GCA_002253265.1_ASM225326v1	-	114t
Lactobacillus parabuchneri	152331	PRJNA357007	357007	Terrabacteria group	Firmicutes	2.5438	43.5	-	MSAW01	143	2442	2274	4/18/17	4/21/17	Scaffold	University of Bern	SAMN06130977	GCA_002095635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/635/GCA_002095635.1_ASM209563v1	28261177	FAM21838
Phenylobacterium sp. RIFCSPHIGHO2_01_FULL_70_10	1801945	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	3.22079	69.4	-	MHXO01	374	3346	2569	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315035	GCA_001825585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/585/GCA_001825585.1_ASM182558v1	27774985	-
Aureimonas sp. AU40	1637747	PRJDB3816	300645	Proteobacteria	Alphaproteobacteria	5.25549	66.8	-	BBWL01	90	4907	4743	11/7/15	4/11/17	Contig	"Graduate School of Life Sciences, Tohoku University"	SAMD00028695	GCA_001463785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/785/GCA_001463785.1_ASM146378v1	26534993	AU40
Kocuria kristinae	37923	PRJNA350375	350375	Terrabacteria group	Actinobacteria	2.40949	71.7	-	MODZ01	33	2124	2012	11/3/16	4/10/17	Scaffold	"Chinese PLA General Hospital, Chinese PLA Postgraduate Medical School"	SAMN05938613	GCA_001866115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/115/GCA_001866115.1_ASM186611v1	-	LCT-H5
Duganella sp. CF402	1855289	PRJEB16861	351021	Proteobacteria	Betaproteobacteria	6.24045	62.9	-	FOBG01	14	5562	5413	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216319	GCA_900109645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/645/GCA_900109645.1_IMG-taxon_2616644845_annotated_assembly	-	CF402
Mycobacterium chimaera	222805	PRJNA294775	294775	Terrabacteria group	Actinobacteria	6.45141	67.6	-	LJHN01	210	6171	5799	10/6/15	4/11/17	Contig	Trinity College Dublin	SAMN04032786	GCA_001307395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/395/GCA_001307395.1_ASM130739v1	26634757	MCIMRL6
Idiomarina abyssalis	86102	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.72194	46.6	-	DFLP01	65	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454529	GCA_002375265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/265/GCA_002375265.1_ASM237526v1	28894102	-
Lactobacillus agilis	1601	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.19175	41.3	-	LUGP01	112	2216	2017	8/1/17	8/3/17	Scaffold	University of Minnesota	SAMN04498966	GCA_002237885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/885/GCA_002237885.1_ASM223788v1	-	UMNLA2
Mycobacterium conceptionense	451644	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.44365	66.4	-	MBGG01	362	6339	5962	1/18/17	4/6/17	Contig	JCVI	SAMN04634284	GCA_001954235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/235/GCA_001954235.1_ASM195423v1	-	IS-2586
Lactobacillus acetotolerans	1600	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.35506	35.6	-	DGZW01	94	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455402	GCA_002397235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/235/GCA_002397235.1_ASM239723v1	28894102	-
Klebsiella quasipneumoniae subsp. quasipneumoniae	1667327	PRJEB5158	240549	Proteobacteria	Gammaproteobacteria	5.38773	57.9	-	CBZM01	476	5570	5080	3/6/14	2/21/17	Contig	INSTITUT PASTEUR	SAMEA3138982	GCA_000612905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/905/GCA_000612905.1_KPSB59_PRJEB5158	24958762	18A069
Staphylococcus argenteus	985002	PRJNA310972	310972	Terrabacteria group	Firmicutes	2.80132	32.3	-	LSFQ01	42	2804	2635	5/10/16	4/5/17	Contig	Uppsala University	SAMN04457463	GCA_001641625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/625/GCA_001641625.1_ASM164162v1	-	RK308
Moritella viscosa	80854	PRJEB16014	348508	Proteobacteria	Gammaproteobacteria	5.14228	39.2	-	FRDS01	175	4605	4361	12/6/16	4/11/17	Contig	UNIVERSITY OF TROMSO	SAMEA4520414	GCA_900120115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/115/GCA_900120115.1_clc.v6.5.NVI4917.01	-	-
Mycobacterium immunogenum	83262	PRJNA294421	294421	Terrabacteria group	Actinobacteria	5.86061	64	-	LJFV01	80	5926	5703	9/22/15	4/4/17	Contig	US EPA	SAMN04025499	GCA_001296385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/385/GCA_001296385.1_ASM129638v1	-	H106
Frigoribacterium sp. Leaf172	1736285	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.24679	71.2	-	LMPB01	7	3060	2977	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151665	GCA_001424285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/285/GCA_001424285.1_Leaf172	26633631	Leaf172
Enterobacter ludwigii	299767	PRJNA335780	335780	Proteobacteria	Gammaproteobacteria	4.77942	54.7	-	MCGF01	23	4645	4447	8/5/16	4/5/17	Contig	LaTrobe University	SAMN05462048	GCA_001698955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/955/GCA_001698955.1_ASM169895v1	-	NCR3
Leisingera sp. JC1	1855282	PRJNA323448	323448	Proteobacteria	Alphaproteobacteria	5.19097	62.3	-	LYUZ01	168	5049	4767	7/6/16	4/13/17	Scaffold	University of Connecticut	SAMN05178899	GCA_001679925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/925/GCA_001679925.1_ASM167992v1	-	JC1
Clostridium baratii	1561	PRJNA343447	343447	Terrabacteria group	Firmicutes	3.05761	28	-	MJHN01	24	2955	2827	3/14/17	3/16/17	Scaffold	Institut Pasteur	SAMN05788128	GCA_002025875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/875/GCA_002025875.1_ASM202587v1	-	695-15
Citrobacter braakii	57706	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.99963	52.3	-	JULD01	108	4868	4686	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03198201	GCA_001067775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/775/GCA_001067775.1_ASM106777v1	26230489	980_SSON
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.37269	51.2	-	MPQW01	68	2332	2236	3/6/17	3/9/17	Contig	Harvard University	SAMN06016269	GCA_002020745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/745/GCA_002020745.1_ASM202074v1	-	-
Bacillus aryabhattai	412384	PRJNA395635	395635	Terrabacteria group	Firmicutes	4.19388	37.5	-	NOXE01	72	4250	4039	8/22/17	8/24/17	Contig	Rajiv Gandhi Centre for Biotechnology	SAMN07411813	GCA_002265635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/635/GCA_002265635.1_ASM226563v1	-	PHB10
Elizabethkingia miricola	172045	PRJEB13258	317808	FCB group	Bacteroidetes/Chlorobi group	4.29997	35.8	-	FLSS01	41	4005	3897	6/30/16	7/29/17	Contig	JUSTUS LIEBIG UNIVERSITY	SAMEA4051575	GCA_900092045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/045/GCA_900092045.1_ASM90009204v1	-	-
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	6.77005	44.2	-	MPTE01	106	5910	5748	1/18/17	4/6/17	Contig	Cornell University	SAMN05772537	GCA_001954455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/455/GCA_001954455.1_ASM195445v1	-	FSL F4-0085
Achromobacter sp. DH1f	1397275	PRJNA226199	226199	Proteobacteria	Betaproteobacteria	7.13895	66.4	-	AYMF01	148	6582	6387	4/18/14	4/9/17	Contig	University of Malaya	SAMN02729851	GCA_000633435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/435/GCA_000633435.1_de_novo	-	DH1f
Klebsiella michiganensis	1134687	PRJNA201956	201956	Proteobacteria	Gammaproteobacteria	6.44086	55.7	-	JCNU01	6	6305	5960	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138581	GCA_000567705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/705/GCA_000567705.1_Kleb_oxyt_MGH_41_V1	-	MGH 41
Sulfuricurvum sp. RIFOXYD12_FULL_44_77	1802248	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.15648	44	-	MIBU01	316	2356	2086	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314638	GCA_001830725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/725/GCA_001830725.1_ASM183072v1	27774985	-
Vibrio metoecus	1481663	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	4.10081	46.8	-	NMSJ01	69	3982	3797	8/31/17	9/2/17	Scaffold	University of Alberta	SAMN07350499	GCA_002283805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/805/GCA_002283805.1_ASM228380v1	-	OYP9D09
Hymenobacter sp. unc380mfsha3.1	1793723	PRJEB17376	351535	FCB group	Bacteroidetes/Chlorobi group	3.10796	70.9	-	FOQZ01	15	2976	2850	10/31/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487751	GCA_900113885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/885/GCA_900113885.1_IMG-taxon_2639762635_annotated_assembly	-	UNC380MFSha3.1
Bosea sp. AAP35	1523417	PRJNA255549	255549	Proteobacteria	Alphaproteobacteria	4.46198	66.1	-	LJHQ01	83	4261	4120	9/22/15	4/11/17	Contig	"Institute of Microbiology, ASCR"	SAMN02925442	GCA_001295925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/925/GCA_001295925.1_ASM129592v1	-	AAP35
Devosia sp. LC5	1502724	PRJNA248423	248423	Proteobacteria	Alphaproteobacteria	4.20286	62.3	-	JNNO01	47	4153	4012	7/28/14	4/9/17	Contig	Monash University Malaysia	SAMN02798393	GCA_000735585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/585/GCA_000735585.1_ASM73558v1	25377711	LC5
Lactobacillus kunkeei	148814	PRJNA270965	270965	Terrabacteria group	Firmicutes	1.55294	37.7	-	JXCY01	7	1460	1373	9/11/15	4/4/17	Contig	Uppsala university	SAMN03275716	GCA_001281205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/205/GCA_001281205.1_ASM128120v1	25953738	LAko
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.0821	41.6	-	FTQT01	2	969	907	3/18/17	3/24/17	Contig	Functional Genomics Genter Zurich	SAMEA4555476	GCA_900149435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/435/GCA_900149435.1_9-1a	-	-
Lysinibacillus sp. KCTC 33748	1955700	PRJNA373955	373955	Terrabacteria group	Firmicutes	5.15917	36.6	-	MWSJ01	57	5044	4762	8/1/17	8/3/17	Scaffold	CSIR- National Chemical Laboratory	SAMN06319187	GCA_002237755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/755/GCA_002237755.1_ASM223775v1	-	KCTC 33748
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.35886	35	-	LZHA01	90	2270	2103	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179605	GCA_001690335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/335/GCA_001690335.1_ASM169033v1	-	Gris1-4
Candidatus Accumulibacter sp. UBA704	1946150	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	3.8402	60.7	-	DBMG01	198	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453169	GCA_002304785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/785/GCA_002304785.1_ASM230478v1	28894102	-
Bacillus subtilis subsp. subtilis str. RO-NN-1	1052588	PRJNA68559	68559	Terrabacteria group	Firmicutes	4.01195	43.9	chromosome:NC_017195.1/CP002906.1	-	1	4115	3900	10/5/11	3/22/17	Complete Genome	Institute for Genome Sciences	SAMN02603351	GCA_000227485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/485/GCA_000227485.1_ASM22748v1	22493193	RO-NN-1
Staphylococcus cohnii	29382	PRJNA263231	263231	Terrabacteria group	Firmicutes	2.57737	32.3	-	JRVX01	124	2494	2339	11/10/16	4/5/17	Contig	CSIR-Institute of Microbial Technology	SAMN03097240	GCA_001876755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/755/GCA_001876755.1_ASM187675v1	-	SE4.3
Salinivibrio sp. ML323	1909474	PRJNA368692	368692	Proteobacteria	Gammaproteobacteria	3.23388	50.7	-	MUES01	63	3014	2854	2/14/17	4/17/17	Contig	Universidad de Sevilla	SAMN06270190	GCA_001995745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/745/GCA_001995745.1_ASM199574v1	-	ML323
Pseudobutyrivibrio sp. OR37	1798186	PRJEB17350	351561	Terrabacteria group	Firmicutes	3.55837	38.7	-	FOQF01	81	3194	3032	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487830	GCA_900113655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/655/GCA_900113655.1_IMG-taxon_2606217763_annotated_assembly	-	OR37
Kandleria vitulina	1630	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.54085	35	-	DGGO01	198	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452816	GCA_002392245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/245/GCA_002392245.1_ASM239224v1	28894102	-
Pantoea dispersa	59814	PRJNA278433	278433	Proteobacteria	Gammaproteobacteria	4.91108	57.5	-	LDSF01	58	4581	4405	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401408	GCA_001477195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/195/GCA_001477195.1_ASM147719v1	26793183	SA4
Acetobacter sp. 46_36	1896965	PRJNA321218	321218	Proteobacteria	Alphaproteobacteria	1.90458	47.1	-	MNTT01	16	1796	1727	12/23/16	12/23/16	Scaffold	None	SAMN05717303	GCA_001917135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/135/GCA_001917135.1_ASM191713v1	27819664	-
Roseburia sp. CAG:471	1262948	PRJEB895	206880	Terrabacteria group	Firmicutes	2.68984	45.8	-	CBIB01	90	2369	2343	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138739	GCA_000437095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/095/GCA_000437095.1_MGS471	-	-
Vibrio owensii	696485	PRJDB3039	271954	Proteobacteria	Gammaproteobacteria	5.85079	45.6	-	BBKO01	198	5384	5181	1/7/15	4/2/17	Contig	University of Miyazaki	SAMD00019142	GCA_000818275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/275/GCA_000818275.1_V_owensii_OCN002_1.0	25527835	OCN002
Faecalibacterium sp. CAG:74_58_120	1897005	PRJNA321218	321218	Terrabacteria group	Firmicutes	3.34153	57.7	-	MNSS01	73	2979	2833	12/23/16	12/23/16	Scaffold	None	SAMN05717276	GCA_001916575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/575/GCA_001916575.1_ASM191657v1	27819664	-
Bordetella hinzii CA90 BAL1384	1331259	PRJNA202162	202162	Proteobacteria	Betaproteobacteria	4.89897	66.9	-	JHEO01	255	4806	4374	4/30/14	4/2/17	Contig	JCVI	SAMN02263911	GCA_000657815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/815/GCA_000657815.1_gbh04v01	-	CA90 BAL1384
Helicobacter sp. MIT 05-5293	1548149	PRJNA261711	261711	Proteobacteria	delta/epsilon subdivisions	2.01036	37.7	-	JROZ01	101	2093	1813	10/10/14	4/9/17	Scaffold	Massachusetts Institute of Technology	SAMN03075558	GCA_000765665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/665/GCA_000765665.1_ASM76566v1	25428971	MIT 05-5293
Pseudomonas denitrificans (nomen rejiciendum)	43306	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	7.20204	66	-	JVGD01	173	6934	6616	7/10/15	5/30/17	Scaffold	University of Washington	SAMN03197655	GCA_001063435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/435/GCA_001063435.1_ASM106343v1	26230489	461_PDEN
Kocuria sp. UBA1592	1946672	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.17805	67.8	-	DCNQ01	178	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451711	GCA_002322055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/055/GCA_002322055.1_ASM232205v1	28894102	-
Sphingopyxis sp. MWB1	1537715	PRJNA258496	258496	Proteobacteria	Alphaproteobacteria	3.11843	62.8	-	JQFJ01	5	2920	2817	10/6/14	4/9/17	Contig	Korea Basic Science Institute	SAMN02999383	GCA_000763945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/945/GCA_000763945.1_ASM76394v1	25477411	MWB1
Leifsonia sp. Root60	1736567	PRJNA297942	297942	Terrabacteria group	Actinobacteria	3.61481	68.2	-	LMGR01	4	3389	3305	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155836	GCA_001427485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/485/GCA_001427485.1_Root60	26633631	Root60
Lysobacter sp. A03	1199154	PRJNA273484	273484	Proteobacteria	Gammaproteobacteria	2.86429	65.8	-	JXSS01	119	2609	2473	2/12/15	4/17/17	Contig	UFRGS	SAMN03292482	GCA_000855665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/855/665/GCA_000855665.1_ASM85566v1	25838495	A03
Ensifer sp. Root258	1736502	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	7.72943	61.1	-	LMIX01	53	7442	7040	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155771	GCA_001429745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/745/GCA_001429745.1_Root258	26633631	Root258
Butyrivibrio sp. WCD2001	1280681	PRJNA185723	185723	Terrabacteria group	Firmicutes	4.27674	42	-	AUJZ01	59	3830	3674	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440820	GCA_000424485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/485/GCA_000424485.1_ASM42448v1	-	WCD2001
Streptomyces rimosus subsp. rimosus	132474	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.27373	72	-	JOCO01	111	7339	6985	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645421	GCA_000718865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/865/GCA_000718865.1_ASM71886v1	-	NRRL WC-3882
Curtobacterium sp. B8	95611	PRJDA69955	69955	Terrabacteria group	Actinobacteria	3.37483	71.6	-	BACW01	703	3417	2746	12/26/12	4/17/17	Scaffold	Kazusa DNA Research Institute	SAMD00036567	GCA_000333315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/315/GCA_000333315.1_ASM33331v1	-	B8
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.78637	58.8	-	LNWG01	64	4589	4450	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339843	GCA_001681355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/355/GCA_001681355.1_ASM168135v1	-	F2630
Brochothrix thermosphacta	2756	PRJNA338887	338887	Terrabacteria group	Firmicutes	2.5484	36.3	-	MDLT01	186	2413	2305	8/29/16	4/5/17	Contig	CSIRO Agriculture and Food; Food Safety and Stability Group	SAMN05567456	GCA_001715795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/795/GCA_001715795.1_ASM171579v1	-	Bth-7811
Raoultella ornithinolytica	54291	PRJNA242950	242950	Proteobacteria	Gammaproteobacteria	5.65276	55.5	-	JHQH01	39	5452	5026	4/25/14	4/2/17	Contig	Hasselt University	SAMN02711702	GCA_000648315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/315/GCA_000648315.1_Raoultella_ornithinolytica_TNT	24874678	TNT
Mycoplasma sp. CAG:611_25_7	1897009	PRJNA321218	321218	Terrabacteria group	Tenericutes	0.457126	24.9	-	MNUA01	126	616	370	12/23/16	12/23/16	Scaffold	None	SAMN05717310	GCA_001917275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/275/GCA_001917275.1_ASM191727v1	27819664	-
Streptococcus oralis subsp. tigurinus	1077464	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.84729	41.3	-	NCUF01	10	1862	1747	4/18/17	4/21/17	Contig	Slagelse Hospital	SAMN06705629	GCA_002096355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/355/GCA_002096355.1_ASM209635v1	27325438	OD_326128_08
Mycobacterium asiaticum DSM 44297	1265310	PRJNA354248	354248	Terrabacteria group	Actinobacteria	5.96954	66.4	-	MVHI01	135	5572	5338	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064231	GCA_002086545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/545/GCA_002086545.1_ASM208654v1	-	DSM 44297
Porphyromonas gulae	111105	PRJNA253610	253610	FCB group	Bacteroidetes/Chlorobi group	2.37192	48.6	-	JRAQ01	44	2131	1956	10/27/14	4/2/17	Contig	UC Davis	SAMN03002889	GCA_000768915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/915/GCA_000768915.1_ASM76891v1	25858832	COT-052 OH3471
Citrobacter amalonaticus	35703	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.93386	53.3	-	LORU01	1	4875	4491	12/21/15	4/4/17	Contig	US Food and Drug Administration 	SAMN03996310	GCA_001471655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/655/GCA_001471655.1_ASM147165v1	-	FDAARGOS_166
Blastomonas sp. CCH8-A3	1768743	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	4.49984	64.1	-	LSHS01	204	4409	4224	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299415	GCA_001555855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/855/GCA_001555855.1_ASM155585v1	-	CCH8-A3
Pseudomonas protegens	380021	PRJNA327131	327131	Proteobacteria	Gammaproteobacteria	6.98055	63.4	-	MAUK01	11	6362	6248	7/10/16	4/5/17	Scaffold	Centro de Investigacion y de Estudios Avanzados del IPN	SAMN05302430	GCA_001682945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/945/GCA_001682945.1_ASM168294v1	-	PA26
Massilia sp. JS1662	1519190	PRJNA254397	254397	Proteobacteria	Betaproteobacteria	7.35693	66.2	-	JPQD01	437	6326	6146	9/29/14	4/9/17	Contig	Georgia Institute of Technology	SAMN02903339	GCA_000759615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/615/GCA_000759615.1_ASM75961v1	-	JS1662
Gordonia sp. 852002-10350_SCH5691597	1834085	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.10998	65.3	-	LZMO01	312	4789	4367	6/17/16	4/12/17	Contig	JCVI	SAMN04696137	GCA_001665715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/715/GCA_001665715.1_ASM166571v1	-	852002-10350_SCH5691597
Mucilaginibacter sp. NFR10	1566292	PRJEB15930	348246	FCB group	Bacteroidetes/Chlorobi group	6.43055	42.8	-	FMTV01	28	5417	5301	10/14/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159284	GCA_900100445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/445/GCA_900100445.1_IMG-taxon_2599185184_annotated_assembly	-	NFR10
Blautia sp. SF-50	1520805	PRJEB15736	347690	Terrabacteria group	Firmicutes	3.6984	43.8	-	FMUW01	78	3508	3290	10/17/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910433	GCA_900101315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/315/GCA_900101315.1_IMG-taxon_2593339257_annotated_assembly	-	SF-50
Dickeya solani D s0432-1	1231725	PRJNA168349	168349	Proteobacteria	Gammaproteobacteria	4.90452	56.2	-	AMWE01	4	4314	4095	10/18/13	4/2/17	Contig	University of Helsinki	SAMN02471790	GCA_000474655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/655/GCA_000474655.1_Dickeya1.0	-	D s0432-1
Pluralibacter gergoviae	61647	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.53991	59	-	NDFB01	102	5274	5026	5/31/17	6/2/17	Contig	JCVI	SAMN06218074	GCA_002161945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/945/GCA_002161945.1_ASM216194v1	-	40874
Chryseobacterium indologenes	253	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	5.28719	38.1	-	DCFI01	48	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453202	GCA_002315415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/415/GCA_002315415.1_ASM231541v1	28894102	-
Elizabethkingia meningoseptica	238	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	3.98361	36.3	-	MAIA01	15	3607	3513	3/7/17	3/10/17	Contig	CDC	SAMN05281842	GCA_002023095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/095/GCA_002023095.1_ASM202309v1	-	G4120
Aeromonas sp. RU39B	1907416	PRJEB18855	360733	Proteobacteria	Gammaproteobacteria	4.2213	57.9	-	FTMJ01	37	4021	3871	1/14/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05880558	GCA_900156095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/095/GCA_900156095.1_IMG-taxon_2708742413_annotated_assembly	-	RU39B
Mycobacterium fortuitum	1766	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.1819	66.3	-	LZIV01	167	6001	5754	6/17/16	4/5/17	Contig	JCVI	SAMN04634208	GCA_001666985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/985/GCA_001666985.1_ASM166698v1	-	E1141
uncultured Oscillibacter sp.	876091	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.02003	59.9	-	FMEI01	16	2910	2860	8/16/16	8/16/16	Scaffold	SC	SAMEA3545305	GCA_900066435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/435/GCA_900066435.1_13470_2_58	-	-
Halorubrum sp. Hd13	1480728	PRJNA232799	232799	Euryarchaeota	Halobacteria	3.81132	67.6	-	NHOY01	130	3704	3464	8/15/17	8/17/17	Scaffold	University of Conn.	SAMN02716046	GCA_002252755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/755/GCA_002252755.1_ASM225275v1	24782836	Hd13
Hyphomonas sp. TMED31	1986606	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	3.02552	57.5	-	NHCK01	102	2954	2882	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971885	GCA_002172815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/815/GCA_002172815.1_ASM217281v1	-	-
Thioclava sp. JM3	1973004	PRJNA380868	380868	Proteobacteria	Alphaproteobacteria	4.1758	63.7	-	NBOB01	42	4065	3933	6/30/17	7/3/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN06650521	GCA_002213185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/185/GCA_002213185.1_ASM221318v1	-	JM3
Wohlfahrtiimonas chitiniclastica	400946	PRJNA382997	382997	Proteobacteria	Gammaproteobacteria	2.11542	43.8	-	NEFJ01	7	2020	1956	8/15/17	8/17/17	Contig	Centers for Disease Control and Prevention	SAMN06758447	GCA_002252265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/265/GCA_002252265.1_ASM225226v1	-	F6513
Sinorhizobium sp. NFACC03	1566295	PRJEB16186	348932	Proteobacteria	Alphaproteobacteria	7.22895	61.9	-	FMXF01	78	6952	6536	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159448	GCA_900103435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/435/GCA_900103435.1_IMG-taxon_2599185352_annotated_assembly	-	NFACC03
Cupriavidus sp. HPC(L)	1217418	PRJNA171719	171719	Proteobacteria	Betaproteobacteria	5.49256	67.6	-	AMPR02	475	4998	4606	10/22/12	4/16/17	Contig	National Environmental Engineering Research Institute 	SAMN02336744	GCA_000307735.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/735/GCA_000307735.3_ASM30773v3	-	HPC(L)
Microbacterium sp. 11MF	1169146	PRJNA187941	187941	Terrabacteria group	Actinobacteria	2.91291	69.9	-	ARTJ01	3	2830	2768	4/26/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440517	GCA_000383475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/475/GCA_000383475.1_ASM38347v1	-	11MF
Snodgrassella alvi	1196083	PRJNA339423	339423	Proteobacteria	Betaproteobacteria	2.42125	41.2	-	NAHI01	75	2172	2062	4/13/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603564	GCA_002088525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/525/GCA_002088525.1_ASM208852v1	-	N-W4
Xanthomonas translucens	343	PRJNA302486	302486	Proteobacteria	Gammaproteobacteria	4.26012	67.5	-	LNSU01	432	3887	3329	12/3/15	4/4/17	Contig	Kansas State University	SAMN04279067	GCA_001455815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/815/GCA_001455815.1_ASM145581v1	-	XT123
Vibrio crassostreae	246167	PRJEB5878	278609	Proteobacteria	Gammaproteobacteria	5.79184	44.2	-	CCJV01	165	5266	5022	3/20/15	4/4/17	Contig	STATION BIOLOGIQUE DE ROSCOFF	SAMEA2591287	GCA_001368895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/895/GCA_001368895.1_VRSK35_PRJEB5878	-	J5-5
Variovorax sp. OV700	1882826	PRJEB15945	348242	Proteobacteria	Betaproteobacteria	6.48357	65.7	-	FNDR01	36	6038	5851	10/20/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444748	GCA_900099805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/805/GCA_900099805.1_IMG-taxon_2687453678_annotated_assembly	-	OV700
Micavibrio sp. UBA2137	1946913	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	1.7693	44.8	-	DCXL01	5	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455080	GCA_002328415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/415/GCA_002328415.1_ASM232841v1	28894102	-
Mesorhizobium sp. Root1471	1736469	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	3.75054	63	-	LMFW01	2	3631	3550	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155738	GCA_001426965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/965/GCA_001426965.1_Root1471	26633631	Root1471
Methylophaga sp. UBA678	1946901	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.10196	43.4	-	DBNG01	34	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455253	GCA_002299105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/105/GCA_002299105.1_ASM229910v1	28894102	-
Cycloclasticus sp. 44_32_T64	1856282	PRJNA320927	320927	Proteobacteria	Gammaproteobacteria	1.80324	43.6	-	MAAP01	192	1860	1817	5/31/17	5/31/17	Scaffold	Lawrence Berkeley National Lab	SAMN05179563	GCA_002162705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/705/GCA_002162705.1_ASM216270v1	28652349	-
Hydrogenophaga sp. SCN 70-13	1660101	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	2.71987	70.1	-	MEEA01	290	2777	2438	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652446	GCA_001724835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/835/GCA_001724835.1_ASM172483v1	26031303	-
Cellulomonas sp. Leaf334	1736339	PRJNA297956	297956	Terrabacteria group	Actinobacteria	4.74254	72.3	-	LMOO01	12	4373	4276	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151729	GCA_001424195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/195/GCA_001424195.1_Leaf334	26633631	Leaf334
Chryseobacterium sp. YR459	1500292	PRJNA247534	247534	FCB group	Bacteroidetes/Chlorobi group	4.96948	36.2	-	JUGI01	20	4443	4336	12/9/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02787095	GCA_000799235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/235/GCA_000799235.1_ASM79923v1	-	YR459
Sulfurimonas sp. RIFOXYD12_FULL_33_39	1802259	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.3422	34.4	-	MICF01	13	2314	2251	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314634	GCA_001829785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/785/GCA_001829785.1_ASM182978v1	27774985	-
Atopobium sp. UBA2090	1946066	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.80926	63.8	-	DCZG01	168	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454938	GCA_002331575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/575/GCA_002331575.1_ASM233157v1	28894102	-
Bacillus subtilis subsp. spizizenii str. W23	655816	PRJNA38713	38713	Terrabacteria group	Firmicutes	4.02768	43.9	chromosome:NC_014479.1/CP002183.1	-	1	4116	3912	8/31/10	3/22/17	Complete Genome	Bacillus Genetic Stock Center	SAMN02602993	GCA_000146565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/146/565/GCA_000146565.1_ASM14656v1	21527469	W23
Xanthomonas sp. NCPPB1131	487527	PRJNA73023	73023	Proteobacteria	Gammaproteobacteria	3.70204	68.1	-	AGHY01	3224	-	-	9/29/11	11/22/13	Contig	The University of Exeter	SAMN00752559	GCA_000226895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/895/GCA_000226895.2_ASM22689v2	24710305	NCPPB1131
Aeromicrobium sp. REDSEA-S32_B7	1811526	PRJNA289734	289734	Terrabacteria group	Actinobacteria	3.5162	71.9	-	LUNF01	333	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534555	GCA_001626145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/145/GCA_001626145.1_ASM162614v1	27377622	-
Acidiphilium sp. 21-66-27	1970294	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	1.01533	65.7	-	NCBK01	542	1301	1189	8/16/17	8/16/17	Scaffold	None	SAMN06622426	GCA_002255645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/645/GCA_002255645.1_ASM225564v1	-	-
Idiomarina sp. REDSEA-S27_B4	1811542	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	2.38249	47.3	-	LUOA01	57	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534576	GCA_001626525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/525/GCA_001626525.1_ASM162652v1	27377622	-
Halomonas sp. TD01	999141	PRJNA67453	67453	Proteobacteria	Gammaproteobacteria	4.0917	52.5	-	AFQW01	25	3762	3565	6/28/11	4/17/17	Scaffold	"Dept Biological Sciences and Biotechnology, MOE Key Lab. Bioinformatics (& System Biology), School of Life Sciences, Tsinghua University, Beijing, China"	SAMN02471291	GCA_000219565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/565/GCA_000219565.1_ASM21956v1	22040376	TD01
Pusillimonas sp. UBA3600	1947367	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	3.38527	52.6	-	DFMF01	122	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452012	GCA_002376245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/245/GCA_002376245.1_ASM237624v1	28894102	-
Sphingobium sp. HDIP04	428994	PRJNA201012	201012	Proteobacteria	Alphaproteobacteria	4.74158	64.8	-	ATDO01	143	4640	4377	8/9/13	4/17/17	Contig	University of Delhi	SAMN02471714	GCA_000445085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/085/GCA_000445085.1_ASM44508v1	24051321	HDIP04
Megasphaera sp. ASD88	2027407	PRJNA398608	398608	Terrabacteria group	Firmicutes	2.58914	52.7	-	NQXW01	88	2493	2337	9/6/17	9/8/17	Scaffold	Pirogov Russian National Research Medical University	SAMN07514296	GCA_002287425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/425/GCA_002287425.1_ASM228742v1	-	ASD88
Citromicrobium sp. UBA1476	1946344	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.30429	65.3	-	DCSC01	72	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453294	GCA_002325445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/445/GCA_002325445.1_ASM232544v1	28894102	-
Desulfosporosinus sp. Tol-M	1536651	PRJNA258301	258301	Terrabacteria group	Firmicutes	3.0359	44.4	-	JQID01	206	2914	2561	11/3/14	1/28/15	Contig	University of Alberta	SAMN02991555	GCA_000770645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/645/GCA_000770645.1_ASM77064v1	25593260	-
Sphingobacterium sp. CFCC 11742	1775560	PRJNA308520	308520	FCB group	Bacteroidetes/Chlorobi group	3.5621	41.6	-	LQXS01	49	3048	2847	3/10/16	4/12/17	Contig	Research Institute of Forest Ecology Environment and Protection	SAMN04364164	GCA_001586775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/775/GCA_001586775.1_ASM158677v1	-	CFCC 11742
Rothia sp. HMSC067H10	1739260	PRJNA299910	299910	Terrabacteria group	Actinobacteria	2.49008	53.7	-	LTYQ01	49	2178	2044	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477573	GCA_001810635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/635/GCA_001810635.1_ASM181063v1	-	HMSC067H10
Rhodanobacter sp. FW104-R8	1524464	PRJNA255809	255809	Proteobacteria	Gammaproteobacteria	3.72203	67.9	-	LVJR01	124	3390	3250	4/8/16	4/12/17	Contig	ENIGMA	SAMN02929139	GCA_001617365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/365/GCA_001617365.1_ASM161736v1	27048805	FW104-R8
Thiomonas sp. SCN 64-16	1660151	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	3.152	64.1	-	MEGQ01	93	3020	2853	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652520	GCA_001725585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/585/GCA_001725585.1_ASM172558v1	26031303	-
Selenomonas sp. FC4001	1408313	PRJNA223010	223010	Terrabacteria group	Firmicutes	2.88307	49.6	-	JNJF01	22	2748	2634	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841187	GCA_000701565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/565/GCA_000701565.1_ASM70156v1	-	FC4001
Aerococcus sp. 1KP-2016	1981982	PRJNA383933	383933	Terrabacteria group	Firmicutes	2.04244	38.5	-	NEEY01	119	1903	1643	8/15/17	8/17/17	Contig	Pirogov Russian National Research Medical University	SAMN06819952	GCA_002252085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/085/GCA_002252085.1_ASM225208v1	-	1KP-2016
Methanosarcina sp. 2.H.T.1A.8	1483598	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.0699	42.8	-	JJOZ01	69	3509	3296	4/23/15	4/10/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708990	GCA_000979475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/475/GCA_000979475.1_gtlEnvA5udCFS	25756680	2.H.T.1A.8
Haemophilus sp. HMSC71H05	1608898	PRJNA274550	274550	Proteobacteria	Gammaproteobacteria	2.02452	39.4	-	LTND01	21	1992	1914	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498897	GCA_001838635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/635/GCA_001838635.1_ASM183863v1	-	HMSC71H05
Pseudonocardia sp. Ae707_Ps1	1885572	PRJNA336481	336481	Terrabacteria group	Actinobacteria	6.83245	73.6	-	MCIR01	4	6277	6100	1/4/17	4/17/17	Contig	University of East Anglia	SAMN05511401	GCA_001932485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/485/GCA_001932485.1_ASM193248v1	-	Ae707_Ps1
Afipia sp. NBIMC_P1-C3	1320554	PRJNA197276	197276	Proteobacteria	Alphaproteobacteria	4.99681	61.6	-	AVBM01	69	4816	4636	2/12/14	4/9/17	Contig	FDA	SAMN02951893	GCA_000568515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/515/GCA_000568515.1_NBIMC_P1-C3	24367538	NBIMC_P1-C3
Alteromonas sp. LTR	1538096	PRJNA258506	258506	Proteobacteria	Gammaproteobacteria	4.41031	44.2	-	JQHG01	60	3798	3691	9/10/14	4/9/17	Scaffold	Bar Ilan university	SAMN02999436	GCA_000753915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/915/GCA_000753915.1_ASM75391v1	25342689	LTR
Sulfurospirillum sp. UBA4058	1947596	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.60408	43.8	-	DFZK01	15	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454797	GCA_002382085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/085/GCA_002382085.1_ASM238208v1	28894102	-
Thalassospira sp. MCCC 1A01428	1470575	PRJNA239937	239937	Proteobacteria	Alphaproteobacteria	5.77816	53.1	-	JFJZ01	193	5262	5098	4/28/17	5/3/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02671745	GCA_002115825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/825/GCA_002115825.1_ASM211582v1	-	MCCC 1A01428
Collinsella sp. CAG:166	1262850	PRJEB735	206684	Terrabacteria group	Actinobacteria	1.90937	60	-	CBBR01	184	1646	1601	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138614	GCA_000434535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/535/GCA_000434535.1_MGS166	-	-
Delftia sp. 67-8	1895749	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	6.47613	66.7	-	MKUX01	119	5793	5591	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660592	GCA_001898745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/745/GCA_001898745.1_ASM189874v1	-	-
uncultured Coprococcus sp.	458253	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.43495	42.3	-	FMED01	27	3344	3287	8/16/16	8/16/16	Scaffold	SC	SAMEA3545304	GCA_900066425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/425/GCA_900066425.1_13470_2_57	-	-
Capnocytophaga sp. oral taxon 324 str. F0483	1127691	PRJNA80241	80241	FCB group	Bacteroidetes/Chlorobi group	2.73961	39.4	-	AMEV01	63	2402	2281	12/10/12	4/16/17	Scaffold	Washington University	SAMN02436688	GCA_000318315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/315/GCA_000318315.2_ASM31831v2	-	F0483
Veillonella sp. DORA_A_3_16_22	1403932	PRJNA221499	221499	Terrabacteria group	Firmicutes	2.70197	38.5592	plasmid pVSAPL_DORA_A_3_16_22:CM003575.1	AZMK01	1387	3467	3467	12/16/13	11/3/15	Scaffold	"University of California, Berkeley"	SAMN02316559	GCA_001431025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/025/GCA_001431025.1_VllA_DORA_A_3_16_22_velvet_1.1	-	-
Peptoniphilus sp. KHD4	1776387	PRJEB15654	347303	Terrabacteria group	Firmicutes	1.6236	31.9	-	FMWM01	2	1624	1520	10/18/16	4/13/17	Contig	URMITE	SAMEA4492522	GCA_900099555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/555/GCA_900099555.1_PRJEB15654	-	KHD4
Bartonella sp. DB5-6	1094755	PRJNA75179	75179	Proteobacteria	Alphaproteobacteria	2.14764	39	-	AILT01	25	2011	1760	7/13/12	4/7/17	Scaffold	Broad Institute	SAMN02596898	GCA_000278115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/115/GCA_000278115.1_Bart_sp_DB5-6_V1	-	DB5-6
Porphyromonas sp. COT-290 OH860	1515615	PRJNA253611	253611	FCB group	Bacteroidetes/Chlorobi group	2.34307	49.7	-	JRAR01	82	1828	1743	10/27/14	4/9/17	Contig	UC Davis	SAMN03002890	GCA_000768935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/935/GCA_000768935.1_ASM76893v1	25858832	COT-290 OH860
Neisseria sp. HMSC15C08	1581104	PRJNA269873	269873	Proteobacteria	Betaproteobacteria	2.46213	51.1	-	LUAN01	104	2376	2167	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03287026	GCA_001808205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/205/GCA_001808205.1_ASM180820v1	-	HMSC15C08
Campylobacter sp. RM8835	1895633	PRJNA341051	341051	Proteobacteria	delta/epsilon subdivisions	1.69418	32.2	-	MJLL01	49	1742	1661	5/15/17	9/19/17	Contig	USDA	SAMN05687071	GCA_002139095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/095/GCA_002139095.1_ASM213909v1	28854596	RM8835
Alistipes sp. CHKCI003	1780376	PRJEB12387	318234	FCB group	Bacteroidetes/Chlorobi group	2.86988	59	-	FCNT01	105	2520	2358	4/11/16	8/1/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA3730081	GCA_900021155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/155/GCA_900021155.1_CHCKI003	-	-
Olsenella sp. An290	1965625	PRJNA377666	377666	Terrabacteria group	Actinobacteria	2.15313	68.1	-	NFIU01	42	1877	1785	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473712	GCA_002159535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/535/GCA_002159535.1_ASM215953v1	-	An290
Propionibacterium sp. HMSC068C01	1739272	PRJNA299922	299922	Terrabacteria group	Actinobacteria	2.53402	60.1	-	LTHC01	25	2549	2323	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477584	GCA_001810845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/845/GCA_001810845.1_ASM181084v1	-	HMSC068C01
Ralstonia sp. UNCCL144	1502763	PRJEB15924	348261	Proteobacteria	Betaproteobacteria	5.25161	63.6	-	FMTI01	51	4979	4788	10/14/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02799637	GCA_900099845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/845/GCA_900099845.1_IMG-taxon_2596583598_annotated_assembly	-	UNCCL144
Parabacteroides sp. SN4	1750560	PRJEB18759	360090	FCB group	Bacteroidetes/Chlorobi group	5.01579	45.7	-	FTLH01	23	4186	3911	1/5/17	6/12/17	Scaffold	URMITE	SAMEA37237918	GCA_900155425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/425/GCA_900155425.1_PRJEB18759	-	SN4
Micromonospora sp. Rc5	1920666	PRJNA354176	354176	Terrabacteria group	Actinobacteria	7.72086	73.6	-	MQMK01	563	6715	6218	2/24/17	9/29/17	Contig	Ainshams University	SAMN06041774	GCA_002006875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/875/GCA_002006875.1_ASM200687v1	-	Rc5
Actinomyces sp. oral taxon 448 str. F0400	888056	PRJNA53017	53017	Terrabacteria group	Actinobacteria	2.82817	69.5	-	AFQC01	12	2408	2252	7/13/11	4/17/17	Scaffold	Baylor College of Medicine	SAMN02299443	GCA_000220835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/835/GCA_000220835.1_ASM22083v1	-	F0400
Desulfovibrio sp. DV	1844708	PRJNA344948	344948	Proteobacteria	delta/epsilon subdivisions	4.85413	63.4	-	MLBG01	219	4319	4021	1/5/17	4/16/17	Contig	"Institute of Bioengineering, Research Center of Biotechnology of RAS"	SAMN05892218	GCA_001936595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/595/GCA_001936595.1_ASM193659v1	-	DV
Fusobacterium sp. CM22	936563	PRJNA165909	165909	Fusobacteria	Fusobacteriia	2.43814	26.7	-	JAQC01	87	2460	2283	1/28/14	4/17/17	Contig	JCVI	SAMN02641566	GCA_000524395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/395/GCA_000524395.1_FspCM22v1.0	-	CM22
Prochlorococcus sp. MIT 0702	1499503	PRJNA246696	246696	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.58306	50.6	-	JNBB01	61	2602	2440	9/29/14	4/9/17	Contig	MIT	SAMN02769574	GCA_000760315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/315/GCA_000760315.1_ASM76031v1	25977791	MIT 0702
Shigella sp. FC2175	1898680	PRJNA342384	342384	Proteobacteria	Gammaproteobacteria	4.48662	50.7	-	MINR01	525	5267	4088	9/17/16	3/5/17	Contig	Christian Medical College	SAMN05756142	GCA_001730415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/415/GCA_001730415.1_ASM173041v1	-	FC2175
Coprobacillus sp. CAG:605	1262855	PRJEB956	206881	Terrabacteria group	Firmicutes	1.20157	29.4	-	CBAU01	50	1244	1211	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138550	GCA_000433255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/255/GCA_000433255.1_MGS605	-	-
Colwellia sp. 39_35_sub15_T18	1856279	PRJNA320927	320927	Proteobacteria	Gammaproteobacteria	4.01121	38.6	-	MAAE01	72	3616	3519	5/31/17	5/31/17	Scaffold	Lawrence Berkeley National Lab	SAMN05179552	GCA_002162675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/675/GCA_002162675.1_ASM216267v1	28652349	-
Thauera sp. UBA4044	1947678	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	1.86671	64.9	-	DFZY01	136	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457341	GCA_002382285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/285/GCA_002382285.1_ASM238228v1	28894102	-
Exiguobacterium sp. OS-77	1241306	PRJDB1123	205495	Terrabacteria group	Firmicutes	3.15148	47.1	-	BARY01	23	3246	3171	5/30/13	4/8/17	Contig	Kyushu University	SAMD00036741	GCA_000414195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/195/GCA_000414195.1_ASM41419v1	24414928	OS-77
Bacteroides sp. 2_1_33B	469589	PRJNA38351	38351	FCB group	Bacteroidetes/Chlorobi group	4.92704	44.9	-	ACPR01	24	4067	3883	10/23/09	5/18/17	Scaffold	Broad Institute	SAMN02463735	GCA_000162175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/175/GCA_000162175.1_ASM16217v1	-	2_1_33B
Thioalkalivibrio sp. ALJ16	1158762	PRJNA176573	176573	Proteobacteria	Gammaproteobacteria	2.75506	67	-	ARID01	32	2686	2529	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441680	GCA_000377345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/345/GCA_000377345.1_ASM37734v1	-	ALJ16
Ruminococcus sp. YE78	1352374	PRJEB16166	348912	Terrabacteria group	Firmicutes	4.14668	51	-	FMWT01	53	3752	3558	10/20/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910446	GCA_900103235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/235/GCA_900103235.1_IMG-taxon_2593339151_annotated_assembly	-	YE78
Sulfurovum sp. NBC37-1	387093	PRJDA18965	18965	Proteobacteria	delta/epsilon subdivisions	2.56228	43.9	chromosome:NC_009663.1/AP009179.1	-	1	2581	2496	7/11/07	4/17/17	Complete Genome	Japan Agency for Marine-Earth Science and Technology	SAMD00060915	GCA_000010345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/345/GCA_000010345.1_ASM1034v1	"1,615,673,517,615,240"	NBC37-1
Thermotoga sp. A7A	1348331	PRJNA208975	208975	Thermotogae	Thermotogae	1.76255	46.2	-	AUNF01	116	-	-	8/7/13	9/23/13	Contig	CSIRO	SAMN02208118	GCA_000444765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/765/GCA_000444765.1_ThermA7A	24009120	-
Stenotrophomonas sp. BIIR7	1904462	PRJNA344025	344025	Proteobacteria	Gammaproteobacteria	4.37199	66.5	-	MKCZ01	191	4047	3820	10/6/16	4/17/17	Contig	University of Granada	SAMN05804953	GCA_001753645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/645/GCA_001753645.1_ASM175364v1	-	BIIR7
Pseudovibrio sp. Ab134	1898042	PRJNA341851	341851	Proteobacteria	Alphaproteobacteria	5.97563	52.1	-	MIEL01	39	5435	5284	1/10/17	4/16/17	Contig	Universidade Federal do Rio de Janeiro	SAMN05729687	GCA_001941685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/685/GCA_001941685.1_ASM194168v1	-	Ab134
Pedobacter sp. AJM	2003629	PRJNA387348	387348	FCB group	Bacteroidetes/Chlorobi group	4.88164	39.1	-	NHOT01	28	4232	4115	6/19/17	6/22/17	Contig	GCAT-SEEK	SAMN07150446	GCA_002197755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/755/GCA_002197755.1_ASM219775v1	-	AJM
Brevundimonas sp. Leaf280	1736320	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	2.88288	66.3	-	LMNC01	9	2848	2781	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151710	GCA_001422455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/455/GCA_001422455.1_Leaf280	26633631	Leaf280
Alcanivorax sp. KX64203	1817793	PRJNA315710	315710	Proteobacteria	Gammaproteobacteria	4.7574	61.4	-	LVIC01	79	4464	4156	4/6/16	4/12/17	Contig	"Institute of Oceanology, Chinese Academy of Sciences"	SAMN04569165	GCA_001611695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/695/GCA_001611695.1_ASM161169v1	-	KX64203
Janthinobacterium sp. CG23_2	1706231	PRJEB11769	302134	Proteobacteria	Betaproteobacteria	7.85221	63.5	-	FAOS01	4	6974	6538	11/17/15	4/11/17	Contig	National Center for Genome Resources (NCGR)	SAMEA3663004	GCA_001485665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/665/GCA_001485665.1_Janthinobacterium_sp._CG23_2	-	-
Geobacter sp. UBA4078	1961394	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	3.4883	56.5	-	DFYQ01	138	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452287	GCA_002381895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/895/GCA_002381895.1_ASM238189v1	28894102	-
Caulobacter sp. OV484	1500308	PRJNA247565	247565	Proteobacteria	Alphaproteobacteria	5.17971	68	-	JUGJ01	17	4719	4605	12/9/14	4/10/17	Contig	DOE Joint Genome Institute	SAMN02787156	GCA_000799245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/245/GCA_000799245.1_ASM79924v1	-	OV484
Psychrobacter sp. PAMC 21119	1112209	PRJNA76621	76621	Proteobacteria	Gammaproteobacteria	3.51072	43.3	-	AHVZ01	42	2914	2798	2/9/12	4/7/17	Contig	Korea Polar Research Institute	SAMN02470160	GCA_000247495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/495/GCA_000247495.2_ASM24749v2	22493207	PAMC 21119
Acidovorax sp. JHL-9	1276756	PRJNA195668	195668	Proteobacteria	Betaproteobacteria	4.19466	64.9	-	AUEX01	65	3966	3786	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440639	GCA_000426205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/205/GCA_000426205.1_ASM42620v1	-	JHL-9
Marinobacter sp. EVN1	1397532	PRJNA217943	217943	Proteobacteria	Gammaproteobacteria	4.30102	57.2	-	AXCB01	71	3994	3865	10/21/13	4/9/17	Contig	University of Illinois at Chicago	SAMN02345637	GCA_000475375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/375/GCA_000475375.1_De_Novo_assembly	24356826	EVN1
Polaribacter sp. Hel1_33_49	1336803	PRJNA253168	253168	FCB group	Bacteroidetes/Chlorobi group	3.01275	31	-	JPDI01	2	2616	2519	10/14/14	4/9/17	Contig	Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures	SAMN02867806	GCA_000766805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/766/805/GCA_000766805.1_ASM76680v1	25478683	Hel1_33_49
Sulfitobacter sp. HI0076	1822251	PRJNA305749	305749	Proteobacteria	Alphaproteobacteria	4.3703	60.9	-	LWFQ01	875	4484	3848	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580790	GCA_001635055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/055/GCA_001635055.1_ASM163505v1	-	HI0076
Erythrobacter sp. HI0020	1822223	PRJNA305749	305749	Proteobacteria	Alphaproteobacteria	3.1893	63.5	-	LWEO01	275	3174	2959	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580762	GCA_001634715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/715/GCA_001634715.1_ASM163471v1	-	HI0020
Epulopiscium sp. SCG-B10WGA-EpuloB	1712380	PRJNA294498	294498	Terrabacteria group	Firmicutes	1.09259	34.9	-	LJHG01	338	888	743	2/2/17	2/2/17	Scaffold	King Abdullah University of Science and Technology (KAUST)	SAMN04038466	GCA_001983545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/545/GCA_001983545.1_ASM198354v1	-	-
Nocardioides sp. Root614	1736571	PRJNA297942	297942	Terrabacteria group	Actinobacteria	5.21435	69.3	-	LMGV01	12	4915	4813	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155840	GCA_001427545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/545/GCA_001427545.1_Root614	26633631	Root614
Paracoccus sp. SM22M-07	1520813	PRJNA254840	254840	Proteobacteria	Alphaproteobacteria	3.90517	64.8	-	JPKW01	57	3818	3635	11/30/16	4/16/17	Scaffold	UIUC	SAMN02905731	GCA_001887735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/735/GCA_001887735.1_ASM188773v1	-	SM22M-07
Candidatus Arthromitus sp. SFB-4	1054945	PRJNA69905	69905	Terrabacteria group	Firmicutes	1.34279	28	-	AFXU01	355	1650	1623	3/14/12	7/29/15	Contig	Stanford University	SAMN00631070	GCA_000252725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/725/GCA_000252725.2_ASM25272v2	-	SFB-4
Herbaspirillum sp. HZ10	2014887	PRJNA390874	390874	Proteobacteria	Betaproteobacteria	5.53456	64.9	-	NJGU01	31	4859	4762	6/30/17	7/3/17	Contig	Northwest A&F University	SAMN07251781	GCA_002213415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/415/GCA_002213415.1_ASM221341v1	-	HZ10
Methylobacterium sp. Leaf86	1736242	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	5.30388	65.8	-	LMMG01	44	4929	4671	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151622	GCA_001422165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/165/GCA_001422165.1_ASM142216v1	26633631	Leaf86
Citrobacter sp. MGH100	1686377	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.00385	51.5	-	LESM01	9	5038	4726	6/19/15	4/10/17	Scaffold	Broad Institute	SAMN03280162	GCA_001034465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/465/GCA_001034465.1_Citr_freu_complex_MGH100_V1	-	MGH100
Anabaena sp. LE011-02	1710892	PRJNA294801	294801	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.74075	38.1	-	LJOP01	122	4369	4072	6/20/16	6/20/16	Scaffold	Oregon State University	SAMN04028828	GCA_001672225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/225/GCA_001672225.1_ASM167222v1	-	-
Treponema sp. GWA1_62_8	1802378	PRJNA288027	288027	Spirochaetes	Spirochaetia	3.78578	59.7	-	MIDK01	312	3784	2535	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313957	GCA_001830155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/155/GCA_001830155.1_ASM183015v1	27774985	-
Calothrix sp. PCC 7103	32057	PRJNA159495	159495	Terrabacteria group	Cyanobacteria/Melainabacteria group	11.5844	38.6	-	ALVJ01	12	10001	9413	1/7/13	5/18/17	Scaffold	JGI	SAMN02261256	GCA_000331305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/305/GCA_000331305.1_ASM33130v1	23277585	PCC 7103
Novosphingobium sp. AAP83	1523425	PRJNA255562	255562	Proteobacteria	Alphaproteobacteria	4.23209	59.4	-	LJHY01	84	3924	3765	9/22/15	4/11/17	Contig	"Institute of Microbiology, ASCR"	SAMN02927142	GCA_001295795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/795/GCA_001295795.1_ASM129579v1	-	AAP83
Lactobacillus sp. HMSC068B07	1715120	PRJNA296248	296248	Terrabacteria group	Firmicutes	2.9774	46.6	-	LTJI01	83	2997	2789	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477520	GCA_001809645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/645/GCA_001809645.1_ASM180964v1	-	HMSC068B07
Enterococcus sp. HMSC069A01	1715125	PRJNA296253	296253	Terrabacteria group	Firmicutes	2.7278	38	-	LTJG01	117	2808	2631	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477521	GCA_001809675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/675/GCA_001809675.1_ASM180967v1	-	HMSC069A01
Prevotella sp. RM4	1200547	PRJNA223453	223453	FCB group	Bacteroidetes/Chlorobi group	3.35252	48	-	JNKG01	15	2787	2700	6/11/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02841220	GCA_000701965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/965/GCA_000701965.1_ASM70196v1	-	RM4
Pantoea sp. AS-PWVM4	1332069	PRJNA202228	202228	Proteobacteria	Gammaproteobacteria	4.99087	54	-	ASZC01	46	4654	4513	9/16/13	4/9/17	Contig	Institute of Microbial Technology	SAMN02470003	GCA_000468095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/095/GCA_000468095.1_Pantoea_sp._AS-PWVM4	24309733	AS-PWVM4
Sulfurovum sp. 17-42-90	1970442	PRJNA379596	379596	Proteobacteria	delta/epsilon subdivisions	1.96455	41.7	-	NCIS01	92	2055	1964	8/16/17	8/16/17	Scaffold	None	SAMN06622236	GCA_002256845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/845/GCA_002256845.1_ASM225684v1	-	-
Serratia sp. HMSC15F11	1581106	PRJNA269875	269875	Proteobacteria	Gammaproteobacteria	5.39675	58.8	-	LWNG01	132	5144	4914	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03287027	GCA_001808215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/215/GCA_001808215.1_ASM180821v1	-	HMSC15F11
Thermococcus sp. JdFR-02	1935003	PRJNA269163	269163	Euryarchaeota	Thermococci	2.36235	38.1	-	MTLP01	44	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226319	GCA_002009975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/975/GCA_002009975.1_ASM200997v1	28350381	-
Bifidobacterium sp. UBA744	1946112	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.70819	62.1	-	DBKS01	64	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452633	GCA_002298605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/605/GCA_002298605.1_ASM229860v1	28894102	-
Vibrio tasmaniensis LGP32	575788	PRJEA32815	32815	Proteobacteria	Gammaproteobacteria	4.97482	43.8653	chromosome 1:NC_011753.2/FM954972.2; chromosome 2:NC_011744.2/FM954973.2	-	2	4446	4202	12/17/08	5/19/17	Complete Genome	Institut Pasteur	SAMEA2271989	GCA_000091465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/091/465/GCA_000091465.1_ASM9146v1	-	LGP32
Streptococcus sp. M143	563037	PRJNA38755	38755	Terrabacteria group	Firmicutes	1.88098	41.3	-	ACRK01	13	1862	1747	11/23/09	4/17/17	Scaffold	Broad Institute	SAMN02463755	GCA_000162495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/495/GCA_000162495.1_ASM16249v1	-	M143
Bradyrhizobium sp. WSM4349	1040988	PRJNA169713	169713	Proteobacteria	Alphaproteobacteria	8.29433	63.1	-	ARDH01	104	8029	7404	4/19/13	7/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441380	GCA_000373125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/125/GCA_000373125.1_ASM37312v1	-	WSM4349
Shewanella sp. ECSMB14101	1565129	PRJNA264758	264758	Proteobacteria	Gammaproteobacteria	4.26807	49.8	-	JSFF01	81	3781	3641	11/7/14	4/9/17	Contig	shanghai ocean university	SAMN03140421	GCA_000773485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/485/GCA_000773485.1_ASM77348v1	25593251	ECSMB14101
Nocardia sp. 852002-20019_SCH5090214	1834087	PRJNA305922	305922	Terrabacteria group	Actinobacteria	8.27266	67.9	-	LZMK01	467	7614	7224	6/17/16	4/13/17	Contig	JCVI	SAMN04696140	GCA_001665865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/865/GCA_001665865.1_ASM166586v1	-	852002-20019_SCH5090214
Nostoc sp. RF31Y	1932668	PRJNA360315	360315	Terrabacteria group	Cyanobacteria/Melainabacteria group	9.20574	42	-	MTAX01	149	7679	7109	5/22/17	5/24/17	Scaffold	CINVESTAV-Langebio	SAMN06209042	GCA_002155185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/185/GCA_002155185.1_ASM215518v1	-	RF31Y
Escherichia sp. KTE172	1279005	PRJNA185487	185487	Proteobacteria	Gammaproteobacteria	5.33501	50.6	-	ASVT01	12	5523	5191	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN01883166	GCA_000408845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/845/GCA_000408845.1_Esch_coli_KTE172_V1	-	KTE172
Parageobacillus thermoglucosidans	1426	PRJNA330787	330787	Terrabacteria group	Firmicutes	4.00434	43.8351	chromosome:NZ_CP016916.1/CP016916.1; plasmid pNCI001:NZ_CP016917.1/CP016917.1; plasmid pNCI002:NZ_CP016918.1/CP016918.1	-	3	4065	3736	12/13/16	4/6/17	Complete Genome	University of Nottingham	SAMN05416583	GCA_001902495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/495/GCA_001902495.1_ASM190249v1	-	TM242
Corynebacterium sp. KPL1860	1203567	PRJNA169447	169447	Terrabacteria group	Actinobacteria	2.48489	58.4	-	AXLT01	8	2360	2242	10/21/13	4/17/17	Scaffold	Broad Institute	SAMN02597000	GCA_000477995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/995/GCA_000477995.1_Cory_sp_KPL1860_V1	-	KPL1860
Staphylococcus sp. HMSC13A10	1581093	PRJNA269862	269862	Terrabacteria group	Firmicutes	2.5697	31.5	-	LUAF01	69	2472	2342	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03287024	GCA_001808005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/005/GCA_001808005.1_ASM180800v1	-	HMSC13A10
Enterobacter sp. MGH 26	1329830	PRJNA201941	201941	Proteobacteria	Gammaproteobacteria	4.74512	55	-	AYJE01	3	4591	4344	10/30/13	4/2/17	Scaffold	Broad Institute	SAMN02138566	GCA_000492975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/975/GCA_000492975.1_Ente_cloa_complex_MGH_26_V1	-	MGH 26
Parageobacillus thermoglucosidans	1426	PRJNA330787	330787	Terrabacteria group	Firmicutes	4.00492	43.8351	chromosome:NZ_CP016622.1/CP016622.1; plasmid pNCI001:NZ_CP016623.1/CP016623.1; plasmid pNCI002:NZ_CP016624.1/CP016624.1	-	3	4062	3736	8/9/16	4/5/17	Complete Genome	University of Nottingham	SAMN05416582	GCA_001700985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/985/GCA_001700985.1_ASM170098v1	-	NCIMB 11955
Leptolyngbya sp. BC1307	2029589	PRJNA399838	399838	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.91658	52.9	-	NRTA01	222	-	-	9/6/17	9/6/17	Contig	University of Bristol	SAMN07551813	GCA_002286735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/735/GCA_002286735.1_ASM228673v1	-	BC1307
Bacillus subtilis subsp. subtilis	135461	PRJNA389959	389959	Terrabacteria group	Firmicutes	4.14717	43.8	chromosome:NZ_CP021921.1/CP021921.1	-	1	4268	4056	6/20/17	6/22/17	Complete Genome	Microbial Institute for Fermentation Industry	SAMN07211386	GCA_002202035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/035/GCA_002202035.1_ASM220203v1	-	SRCM101392
Sphingomonas sp. PAMC 26617	1112216	PRJNA76643	76643	Proteobacteria	Alphaproteobacteria	4.76041	65.4	-	AHHA01	10	4319	4146	1/12/12	5/19/17	Scaffold	korea Polar Research Institute	SAMN02470169	GCA_000242835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/835/GCA_000242835.1_ASM24283v1	22582371	PAMC 26617
Clostridium sp. ASF356	97138	PRJNA175999	175999	Terrabacteria group	Firmicutes	2.91273	31	-	AQFQ01	6	2864	2685	4/8/13	4/17/17	Scaffold	Broad Institute	SAMN01731003	GCA_000364165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/165/GCA_000364165.1_Clos_bact_ASF356_V1	24723722	ASF356
Bacillus subtilis	1423	PRJNA390048	390048	Terrabacteria group	Firmicutes	4.06543	43.8	chromosome:NZ_CP021903.1/CP021903.1	-	1	4184	3976	6/20/17	9/11/17	Complete Genome	Chinese Academy of Medical Sciences and Peking Union Medical College	SAMN07212162	GCA_002202055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/055/GCA_002202055.1_ASM220205v1	-	ge28
Frankia sp. Iso899	1283283	PRJNA186458	186458	Terrabacteria group	Actinobacteria	5.10473	63.4	-	ATXA01	67	4908	4765	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441579	GCA_000421445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/445/GCA_000421445.1_ASM42144v1	-	Iso899
Flavobacterium sp. F52	1202532	PRJNA169163	169163	FCB group	Bacteroidetes/Chlorobi group	5.33694	34.4	-	AKZQ01	54	4611	4520	7/13/12	5/18/17	Contig	"ARO, Volcani Agriculture Research Center "	SAMN02393829	GCA_000278705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/705/GCA_000278705.1_ASM27870v1	22965088	F52
Klebsiella sp. HMSC22F09	1581057	PRJNA269826	269826	Proteobacteria	Gammaproteobacteria	5.59041	57.2	-	LWNN01	52	5539	5313	10/17/16	2/21/17	Scaffold	The Genome Institute at Washington University	SAMN03436209	GCA_001807645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/645/GCA_001807645.1_ASM180764v1	-	HMSC22F09
Bacillus safensis	561879	PRJNA292972	292972	Terrabacteria group	Firmicutes	3.67017	41.6	-	LIHF01	69	3766	3615	6/1/16	4/5/17	Contig	IBR-CONICET	SAMN03995621	GCA_001653905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/905/GCA_001653905.1_ASM165390v1	27270463	S9
Acinetobacter sp. NIPH 236	1217711	PRJNA183330	183330	Proteobacteria	Gammaproteobacteria	3.54406	38.5	-	APOJ01	19	3437	3258	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01828190	GCA_000367965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/965/GCA_000367965.1_Acin_sp_NIPH_236_V1	-	NIPH 236
Thalassospira xiamenensis	220697	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	4.3041	53.6	-	DGCJ01	189	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455676	GCA_002384545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/545/GCA_002384545.1_ASM238454v1	28894102	-
Bordetella holmesii 30539	1247644	PRJNA178404	178404	Proteobacteria	Betaproteobacteria	3.76289	62.7	-	JDFP01	9	3729	3364	2/27/14	4/2/17	Contig	Institute for Genome Sciences	SAMN02190084	GCA_000583025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/025/GCA_000583025.1_gbhBH001	-	30539
Paeniclostridium sordellii	1505	PRJEB8127	277652	Terrabacteria group	Firmicutes	3.52478	27.4	-	CELB01	31	3467	3347	3/13/15	4/4/17	Contig	WTSI	SAMEA1572093	GCA_001372435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/435/GCA_001372435.1_R27882	-	R27882
Bacillus subtilis	1423	PRJNA379713	379713	Terrabacteria group	Firmicutes	4.07296	43.8	chromosome:NZ_CP020367.1/CP020367.1	-	1	4190	3976	3/27/17	3/30/17	Complete Genome	Shandong Agricultural University	SAMN06618433	GCA_002072735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/735/GCA_002072735.1_ASM207273v1	-	GQJK2
Bacillus gibsonii	79881	PRJNA340205	340205	Terrabacteria group	Firmicutes	4.10009	43.8	chromosome:NZ_CP017070.1/CP017070.1	-	1	4228	3964	9/6/16	4/17/17	Complete Genome	Fujian Academy of Agricultural Sciences	SAMN04631818	GCA_001719185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/185/GCA_001719185.1_ASM171918v1	-	FJAT-10019
Staphylococcus equorum	246432	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.82163	33	-	LNNA01	47	2707	2624	9/28/16	4/5/17	Contig	Tufts University	SAMN04244254	GCA_001747995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/995/GCA_001747995.1_ASM174799v1	-	OffWhite_SAM
Bradyrhizobium elkanii	29448	PRJNA319747	319747	Proteobacteria	Alphaproteobacteria	9.20257	63.8	-	LXEM01	79	8549	8148	9/2/16	4/5/17	Scaffold	Kagoshima University	SAMN04903903	GCA_001718185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/185/GCA_001718185.1_ASM171818v1	-	BLY6-1
Alcaligenes faecalis subsp. faecalis NBRC 13111	1218102	PRJDB5133	340311	Proteobacteria	Betaproteobacteria	4.04291	56.7	-	BDHG01	27	3748	3656	9/2/16	4/5/17	Contig	"Research Institute of Green Science and Technology, Shizuoka University"	SAMD00058712	GCA_001748345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/345/GCA_001748345.1_Afaecalis_assembly01	-	NBRC 13111
Bacillus subtilis	1423	PRJNA285352	285352	Terrabacteria group	Firmicutes	4.09071	43.8	chromosome:NZ_CP011882.1/CP011882.1	-	1	4236	4058	6/23/15	3/26/17	Complete Genome	Institute of Microbial Technology	SAMN03744308	GCA_001037985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/985/GCA_001037985.1_ASM103798v1	27258038	TO-A JPC
Serratia plymuthica NBRC 102599	1218095	PRJDB268	172091	Proteobacteria	Gammaproteobacteria	5.28636	56	-	BCTU01	78	4948	4766	2/23/16	4/5/17	Contig	National Institute of Technology and Evaluation	SAMD00046908	GCA_001590925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/590/925/GCA_001590925.1_ASM159092v1	-	NBRC 102599
Pseudomonas chlororaphis O6	1037915	PRJNA67531	67531	Proteobacteria	Gammaproteobacteria	6.98025	62.9	chromosome:NZ_CM001490.1/CM001490.1	AHOT01	1	13060	12788	5/25/12	6/15/17	Chromosome	"U.S. Department of Agriculture, Agricultural Research Service"	SAMN02436415	GCA_000264555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/555/GCA_000264555.1_ASM26455v1	22792073	O6
Enterococcus cecorum	44008	PRJNA284228	284228	Terrabacteria group	Firmicutes	2.13336	36.9	-	LDEC01	46	2165	1996	6/8/15	4/3/17	Contig	Warsaw University of Life Sciences (SGGW)	SAMN03699964	GCA_001021795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/795/GCA_001021795.1_ASM102179v1	26383654	G-29
Vibrio cyclitrophicus 1F97	1136158	PRJNA81863	81863	Proteobacteria	Gammaproteobacteria	5.3404	43.5	-	AIDA02	132	4783	4540	3/26/12	4/5/17	Scaffold	Massachusetts Institute of Technology	SAMN02470293	GCA_000256115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/115/GCA_000256115.2_ASM25611v2	22491847	1F97
Pseudomonas fragi	296	PRJNA397499	397499	Proteobacteria	Gammaproteobacteria	4.97513	58.4	-	NQKK01	76	4628	4468	8/24/17	8/27/17	Scaffold	CSIRO Agriculture and Food	SAMN07459812	GCA_002269155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/155/GCA_002269155.1_ASM226915v1	-	F1821
Megasphaera elsdenii	907	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.45459	53.7	-	DFTD01	32	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455662	GCA_002380165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/165/GCA_002380165.1_ASM238016v1	28894102	-
Cronobacter malonaticus 507	1208662	PRJEB157	181114	Proteobacteria	Gammaproteobacteria	4.53172	56.6	-	CALD01	249	4721	3618	11/15/12	5/18/17	Scaffold	LifeTech	SAMEA2272169	GCA_000319555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/555/GCA_000319555.1_ASM31955v1	23166675	507
Pseudoalteromonas luteoviolacea CPMOR-2	1365249	PRJNA213491	213491	Proteobacteria	Gammaproteobacteria	5.84588	41.7	-	AUYA01	155	4921	4743	4/22/16	4/5/17	Contig	Technical University of Denmark	SAMN02250933	GCA_001625645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/625/645/GCA_001625645.1_ASM162564v1	-	CPMOR-2
Kangiella geojedonensis	914150	PRJNA274215	274215	Proteobacteria	Gammaproteobacteria	2.49524	43.8	chromosome:NZ_CP010975.1/CP010975.1	-	1	2336	2253	4/29/15	4/17/17	Complete Genome	Korea Research Institute of Bioscience and Biotechnology	SAMN03323776	GCA_000981765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/765/GCA_000981765.1_ASM98176v1	-	YCS-5
Pseudomonas monteilii	76759	PRJNA312288	312288	Proteobacteria	Gammaproteobacteria	6.37705	61.5	-	LSTU01	93	6045	5759	5/13/16	4/5/17	Scaffold	Institute of Microbial Technology	SAMN04496932	GCA_001643215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/215/GCA_001643215.1_ASM164321v1	-	CD10_2
Bacillus sp. LM 4-2	1628753	PRJNA277611	277611	Terrabacteria group	Firmicutes	4.06927	43.8	chromosome:NZ_CP011101.1/CP011101.1	-	1	4203	4003	4/22/15	4/10/17	Complete Genome	Henan University of Science and Technology	SAMN03394562	GCA_000978495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/978/495/GCA_000978495.1_ASM97849v1	26664656	LM 4-2
Wolbachia pipientis	955	PRJNA407640	407640	Proteobacteria	Alphaproteobacteria	1.05043	35.2	-	NWVK01	111	1002	864	9/27/17	9/27/17	Scaffold	New Mexico State University	SAMN07659298	GCA_002379155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/155/GCA_002379155.1_ASM237915v1	-	FL2016
Rhodococcus rhodochrous	1829	PRJNA306614	306614	Terrabacteria group	Actinobacteria	5.18405	68.2	-	LRRK01	105	4790	4585	5/18/16	4/5/17	Scaffold	Northumbria University	SAMN04357317	GCA_001646825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/646/825/GCA_001646825.1_ASM164682v1	-	DSM 43241
Pseudomonas psychrotolerans	237610	PRJNA278259	278259	Proteobacteria	Gammaproteobacteria	5.43522	64.6	-	LDSY01	171	4892	4705	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401424	GCA_001476875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/875/GCA_001476875.1_ASM147687v1	26793183	SB5
Xanthomonas arboricola	56448	PRJNA294649	294649	Proteobacteria	Gammaproteobacteria	4.76048	65.8	-	LJGM01	71	4151	3757	10/6/15	4/4/17	Contig	Instituto Nacional de Investigacion y Tecnologia Agraria y Alimentaria (INIA)	SAMN04028032	GCA_001306965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/965/GCA_001306965.1_ASM130696v1	26823958	CITA 44
Salinispora pacifica CNT609	1169184	PRJNA175185	175185	Terrabacteria group	Actinobacteria	5.32893	69.6	-	ARHK01	95	5064	4576	4/19/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441358	GCA_000375265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/265/GCA_000375265.1_ASM37526v1	-	CNT609
Leptospira kirschneri str. 200801774	1193045	PRJNA167248	167248	Spirochaetes	Spirochaetia	4.644	36.1	-	AKWL02	54	4285	3920	10/17/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436494	GCA_000306555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/555/GCA_000306555.2_gls454126v02	-	200801774
Xanthomonas vasicola	56459	PRJNA264718	264718	Proteobacteria	Gammaproteobacteria	4.99451	63.1	-	JSCA01	81	4620	4018	11/6/14	4/2/17	Scaffold	University of Exeter	SAMN03140188	GCA_000772795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/795/GCA_000772795.1_NCPPB898v1	-	NCPPB 989
Bacillus subtilis HJ5	1453990	PRJNA236412	236412	Terrabacteria group	Firmicutes	4.01293	43.8	chromosome:NZ_CP007173.1/CP007173.1	-	1	4105	3927	4/20/15	3/26/17	Complete Genome	Nanjing Agricultural University	SAMN03492038	GCA_000973605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/605/GCA_000973605.1_ASM97360v1	-	HJ5
Enterococcus mundtii	53346	PRJNA357096	357096	Terrabacteria group	Firmicutes	3.32523	38	-	MSTR01	51	3210	2995	2/8/17	4/6/17	Scaffold	Universidad Andres Bello	SAMN06133060	GCA_001990645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/645/GCA_001990645.1_ASM199064v1	-	CGB1038-1_S1
Rhodococcus fascians 05-339-1	1443891	PRJNA233522	233522	Terrabacteria group	Actinobacteria	5.72594	64.7	-	JMFC01	21	5454	5307	9/30/14	4/11/17	Scaffold	Oregon State University	SAMN02569988	GCA_000760895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/895/GCA_000760895.1_R_fas_05-339-1	-	05-339-1
Flavobacterium columnare	996	PRJNA360885	360885	FCB group	Bacteroidetes/Chlorobi group	3.1578	30.6	-	MTDA01	166	2815	2651	6/22/17	6/24/17	Contig	"Faculty of Veterinary Science, Chulalongkorn University"	SAMN06216423	GCA_002204845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/845/GCA_002204845.1_ASM220484v1	28624550	1362
Campylobacter lanienae	75658	PRJNA340989	340989	Proteobacteria	delta/epsilon subdivisions	1.52756	34.6	-	MJJC01	30	1568	1491	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687009	GCA_002138445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/445/GCA_002138445.1_ASM213844v1	28854596	P0007
Neorhizobium galegae bv. orientalis	323655	PRJEB6976	282473	Proteobacteria	Alphaproteobacteria	6.55017	61.2	-	CCRJ01	65	6382	6148	4/29/15	4/3/17	Contig	UH	SAMEA2698477	GCA_000986035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/986/035/GCA_000986035.1_NgalHAMBI2427Draft	-	-
Acinetobacter ursingii	108980	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.38337	40.1	-	DBEX01	69	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455066	GCA_002294155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/155/GCA_002294155.1_ASM229415v1	28894102	-
Leclercia adecarboxylata	83655	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.61939	55.2	-	DBEM01	64	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453943	GCA_002294475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/475/GCA_002294475.1_ASM229447v1	28894102	-
Bacillus simplex	1478	PRJNA302546	302546	Terrabacteria group	Firmicutes	5.11548	42.8	-	LNNH01	59	5023	4770	1/29/16	4/4/17	Scaffold	Oklahoma State Universtiy	SAMN04274566	GCA_001542915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/915/GCA_001542915.1_ASM154291v1	-	VanAntwerpen02
Bacillus subtilis	1423	PRJNA265137	265137	Terrabacteria group	Firmicutes	4.07967	43.8	chromosome:NZ_CP009796.1/CP009796.1	-	1	4223	4030	11/14/14	4/10/17	Complete Genome	"Institute of Agro-products Processing Science and Technology, Chinese Academy of Agricultural Sciences"	SAMN03145713	GCA_000782835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/835/GCA_000782835.1_ASM78283v1	-	SG6
Staphylococcus xylosus	1288	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.77277	32.6	-	LNPU01	24	2570	2515	9/28/16	4/5/17	Contig	Tufts University	SAMN04244270	GCA_001747745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/745/GCA_001747745.1_ASM174774v1	-	BC10
Vibrio campbellii	680	PRJDB3039	271954	Proteobacteria	Gammaproteobacteria	5.85809	45.4	-	BBKV01	241	5402	5188	1/7/15	4/3/17	Scaffold	University of Miyazaki	SAMD00019131	GCA_000818315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/315/GCA_000818315.1_ASM81831v1	25527835	051011F
Mycobacterium chelonae	1774	PRJNA347845	347845	Terrabacteria group	Actinobacteria	4.91952	64.1	-	MLID01	27	4755	4649	10/26/16	4/5/17	Contig	University of Georgia	SAMN05897985	GCA_001853695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/695/GCA_001853695.1_ASM185369v1	-	203
Actinomyces naeslundii	1655	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.15577	67.6	-	MSRJ01	53	2698	2534	1/18/17	4/6/17	Scaffold	King's College London	SAMN05898709	GCA_001956365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/365/GCA_001956365.1_ASM195636v1	-	Pn6N
Prevotella intermedia	28131	PRJNA386728	386728	FCB group	Bacteroidetes/Chlorobi group	2.7815	43.4	-	NHRV01	13	2461	2314	6/21/17	6/24/17	Scaffold	Chosun University	SAMN07125721	GCA_002204405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/405/GCA_002204405.1_ASM220440v1	-	KCOM 1107
Geobacillus sp. FW23	1048208	PRJNA241053	241053	Terrabacteria group	Firmicutes	3.48683	52.2	-	JGCJ01	245	3648	3224	4/7/14	4/17/17	Contig	Agharkar Research Institute	SAMN02687994	GCA_000617945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/945/GCA_000617945.1_GeoThermo1.0_for_version_1_of_the_Geobacillus_thermoresilans_genome	24812215	FW23
Streptococcus sobrinus TCI-56	1074059	PRJNA71887	71887	Terrabacteria group	Firmicutes	2.07574	43.5	-	AGGI01	372	2134	1848	10/6/11	3/30/17	Contig	JCVI	SAMN02436533	GCA_000227925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/925/GCA_000227925.2_SMUT1-NEX_8-56	-	TCI-56
Morganella morganii	582	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	3.99993	51.1	-	JTBT01	1	3838	3596	11/14/14	7/6/17	Contig	US Food and Drug Administration 	SAMN02934512	GCA_000783955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/955/GCA_000783955.1_ASM78395v1	-	FDAARGOS_63
Acidithiobacillus thiooxidans	930	PRJNA325712	325712	Proteobacteria	Acidithiobacillia	3.79342	53.2	-	LZYI01	277	4106	3714	10/11/16	4/5/17	Contig	Central South University	SAMN05250879	GCA_001756595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/595/GCA_001756595.1_ASM175659v1	-	ZBY
Staphylococcus sciuri	1296	PRJNA278419	278419	Terrabacteria group	Firmicutes	2.9795	33.3	-	LDTO01	164	2974	2852	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401366	GCA_001477405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/405/GCA_001477405.1_ASM147740v1	26793183	NS44
Lactobacillus curvatus	28038	PRJNA343164	343164	Terrabacteria group	Firmicutes	2.00135	41.7	-	MKDG01	52	2015	1873	2/1/17	4/6/17	Contig	ETH Zurich	SAMN05717729	GCA_001981905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/905/GCA_001981905.1_ASM198190v1	-	RI-406
Selenomonas ruminantium	971	PRJEB17357	351554	Terrabacteria group	Firmicutes	3.1123	52.6	-	FOQK01	52	2967	2805	10/31/16	4/11/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487861	GCA_900113715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/715/GCA_900113715.1_IMG-taxon_2623620514_annotated_assembly	-	Z108
Hafnia alvei	569	PRJEB6257	254133	Proteobacteria	Gammaproteobacteria	4.86106	48.6	-	FMIQ01	88	4596	4339	9/6/16	4/5/17	Scaffold	INRA GRIGNON	SAMEA4413650	GCA_900095695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/695/GCA_900095695.1_GB001_A1	-	GB001
Enterococcus hirae	1354	PRJNA342049	342049	Terrabacteria group	Firmicutes	2.85095	36.7	-	MJDO01	29	2710	2542	4/3/17	4/5/17	Contig	Lethbridge Research Centre	SAMN05735011	GCA_002077275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/275/GCA_002077275.1_ASM207727v1	28270110	F0711F 57
Burkholderia cepacia ATCC 25416	983594	PRJNA66169	66169	Proteobacteria	Betaproteobacteria	8.61271	66.6	-	AXBO01	4	8041	7608	9/30/13	4/10/17	Scaffold	JGI	SAMN02440719	GCA_000473485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/485/GCA_000473485.1_ASM47348v1	-	ATCC 25416
Vibrio nigripulchritudo ENn2	1238432	PRJEB553	222453	Proteobacteria	Gammaproteobacteria	6.44589	45.8	-	CANV01	117	5776	5683	10/1/13	4/3/17	Contig	Genoscope CEA	SAMEA3146274	GCA_001050635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/635/GCA_001050635.1_ASM105063v1	23739050	ENn2
Pantoea agglomerans	549	PRJNA239282	239282	Proteobacteria	Gammaproteobacteria	5.36534	55.1	-	JFOK01	26	5031	4826	4/11/14	4/2/17	Contig	Monash University Malaysia	SAMN02676620	GCA_000627115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/115/GCA_000627115.1_Willow_Endophyte_RIT273	24812212	RIT273
Mycobacterium africanum MAL010081	1354166	PRJNA211637	211637	Terrabacteria group	Actinobacteria	4.3898	65.6	-	JLAT01	2	4247	4044	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02231106	GCA_000666305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/305/GCA_000666305.1_Myco_afri_MAL010081_V1	-	MAL010081
Mycobacterium colombiense	339268	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.66709	67.5	-	LZLA01	459	5523	4956	6/17/16	4/5/17	Contig	JCVI	SAMN04634153	GCA_001673085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/085/GCA_001673085.1_ASM167308v1	-	1165916.7
Melissococcus plutonius	33970	PRJNA263543	263543	Terrabacteria group	Firmicutes	2.03983	31.1	-	JSBB01	17	1786	1589	7/7/15	4/3/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03103710	GCA_001047515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/515/GCA_001047515.1_ASM104751v1	-	119
Haemophilus haemolyticus	726	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	1.82702	38.6	-	LYCK01	18	1767	1669	7/5/16	4/5/17	Scaffold	TAILORED-Treatment project	SAMN05043237	GCA_001679045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/045/GCA_001679045.1_ASM167904v1	-	CCUG 12834
Gallibacterium anatis IPDH697-78	1396514	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.41279	39.9	-	JPXQ01	83	2298	2166	11/4/14	4/2/17	Contig	University of Copenhagen	SAMN02344108	GCA_000771935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/935/GCA_000771935.1_ASM77193v1	-	IPDH697-78
Pseudomonas brassicacearum	930166	PRJNA290438	290438	Proteobacteria	Gammaproteobacteria	6.69237	60.9	-	LHVD01	29	6037	5864	8/18/15	4/4/17	Contig	JLU	SAMN03891670	GCA_001269635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/635/GCA_001269635.1_ASM126963v1	-	TM1A3
Leptospira noguchii	28182	PRJNA257151	257151	Spirochaetes	Spirochaetia	4.66268	35.4	-	JQRF01	267	4223	3830	2/24/16	4/5/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947960	GCA_001568325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/325/GCA_001568325.1_ASM156832v1	26833181	56682
Leptospira weilii	28184	PRJNA257145	257145	Spirochaetes	Spirochaetia	4.39631	40.7	-	JQQA01	329	4352	3975	2/24/16	4/5/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947806	GCA_001568905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/905/GCA_001568905.1_ASM156890v1	26833181	56679
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98915	64.1	-	FVBA01	17	4946	4808	3/10/17	3/18/17	Contig	SC	SAMEA2070832	GCA_900130515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/515/GCA_900130515.1_10665_3_4	-	174
Burkholderia gladioli	28095	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.19427	68.1	-	LOZK01	87	7111	6831	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449320	GCA_001527485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/485/GCA_001527485.1_ASM152748v1	-	MSMB1756
Aeromonas veronii	654	PRJEB7047	267818	Proteobacteria	Gammaproteobacteria	4.43081	58.8	-	CDDU01	64	4110	3940	11/24/14	4/2/17	Contig	UCONNMISEQ	SAMEA2752401	GCA_000820285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/285/GCA_000820285.1_PRJEB7047	-	CIP 107763
Chlamydia pecorum	85991	PRJNA288201	288201	PVC group	Chlamydiae	1.11382	41.0363	plasmid CpecL1:NZ_CM003639.1/CM003639.1	LFRH01	6	999	942	12/18/15	4/4/17	Contig	University of the Sunshine Coast	SAMN03796073	GCA_001469535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/535/GCA_001469535.1_ASM146953v1	-	L1
Bacillus subtilis TO-A	1340494	PRJNA205982	205982	Terrabacteria group	Firmicutes	4.05749	43.8	chromosome:NZ_CP005997.1/CP005997.1	-	1	4199	4052	8/4/14	3/24/17	Complete Genome	SRM University	SAMN02183432	GCA_000737405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/405/GCA_000737405.1_ASM73740v1	-	TO-A
Xanthomonas gardneri	90270	PRJNA276590	276590	Proteobacteria	Gammaproteobacteria	5.30189	63.5	-	JZJT01	236	4636	4296	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03378953	GCA_001009585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/585/GCA_001009585.1_ASM100958v1	26089818	SM182-10
Staphylococcus pseudintermedius	283734	PRJNA264198	264198	Terrabacteria group	Firmicutes	2.47768	37.5	-	JTKO01	26	2357	2231	4/18/16	4/5/17	Scaffold	"Department of Technology, Metropolitan University College (Copenhagen, Denmark)"	SAMN03120291	GCA_001622945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/945/GCA_001622945.1_ASM162294v1	27199912	2001-08-299-1
Leuconostoc pseudomesenteroides	33968	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.95326	39.1	-	MPAL01	92	1986	1816	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981330	GCA_002092075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/075/GCA_002092075.1_ASM209207v1	28217118	HPK01
Klebsiella aerogenes UCI 46	1400143	PRJNA219298	219298	Proteobacteria	Gammaproteobacteria	5.34957	55	-	JCKO01	8	5261	5011	2/3/14	4/6/17	Scaffold	Broad Institute	SAMN02356626	GCA_000534115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/115/GCA_000534115.1_Ente_aero_UCI_46_V1	-	UCI 46
Streptobacillus moniliformis	34105	PRJNA319313	319313	Fusobacteria	Fusobacteriia	1.71368	26.3	-	LXKF01	195	1617	1501	6/3/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04892890	GCA_001655905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/905/GCA_001655905.1_ASM165590v1	-	IKB1
Aeromonas caviae	648	PRJNA338160	338160	Proteobacteria	Gammaproteobacteria	4.78689	60.7	-	MDSC01	65	4706	4088	9/16/16	4/10/17	Scaffold	"Biomedical Sciences Institute, University of Sao Paulo"	SAMN05525171	GCA_001730205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/205/GCA_001730205.1_ASM173020v1	-	CHZ306
Xanthomonas perforans	442694	PRJNA276600	276600	Proteobacteria	Gammaproteobacteria	5.46097	64.4	-	JZUY01	93	4976	4616	5/18/15	4/3/17	Contig	Universidade de Sao Paulo	SAMN03378972	GCA_001009675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/675/GCA_001009675.1_v1	26089818	Xp3-15
Weissella cibaria	137591	PRJNA268711	268711	Terrabacteria group	Firmicutes	2.46516	44.7	-	JWHT01	88	2382	2193	2/19/15	4/3/17	Scaffold	CIT / UCC	SAMN03223848	GCA_000878185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/185/GCA_000878185.1_ASM87818v1	25678547	AB3b
Streptococcus cristatus	45634	PRJNA280663	280663	Terrabacteria group	Firmicutes	1.9791	42.6	-	LAWD01	99	1959	1870	3/11/16	4/5/17	Contig	University of Malaya	SAMN03480632	GCA_001588855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/855/GCA_001588855.1_ASM158885v1	-	DOBICBV2
Streptococcus pseudopneumoniae	257758	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.83966	40.3	-	JVSM01	58	1904	1738	7/10/15	4/3/17	Contig	University of Washington	SAMN03197334	GCA_001069865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/865/GCA_001069865.1_ASM106986v1	26230489	144_SPSE
Kingella kingae AA417	1305791	PRJEB1646	194471	Proteobacteria	Betaproteobacteria	1.99123	46.8	-	CBQY01	1	2008	1797	8/14/13	4/1/17	Scaffold	URMITE	SAMEA2272445	GCA_000469905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/905/GCA_000469905.1_AA417	-	AA417
Leuconostoc lactis	1246	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.56779	43.5	-	DGIY01	54	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457683	GCA_002386555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/555/GCA_002386555.1_ASM238655v1	28894102	-
Streptococcus parauberis	1348	PRJNA273857	273857	Terrabacteria group	Firmicutes	2.01223	35.5	-	LJCT01	23	2074	1963	3/29/16	4/5/17	Contig	Norfolk State University	SAMN03299889	GCA_001601935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/935/GCA_001601935.1_PL9_100X	-	PL9
Mycoplasma hominis	2098	PRJNA267549	267549	Terrabacteria group	Tenericutes	0.695863	26.9	-	JVJC01	45	621	558	7/10/15	4/3/17	Contig	University of Washington	SAMN03197578	GCA_001063275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/275/GCA_001063275.1_ASM106327v1	26230489	387_MHOM
Sinorhizobium fredii CCBAU 83643	1128333	PRJNA77219	77219	Proteobacteria	Alphaproteobacteria	6.87695	62	-	AJQQ01	438	6871	6085	5/3/12	5/19/17	Contig	China Agricultural University	SAMN02469486	GCA_000261925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/925/GCA_000261925.1_83643	22586130	CCBAU 83643
Bacillus subtilis subsp. subtilis str. OH 131.1	1404258	PRJNA221154	221154	Terrabacteria group	Firmicutes	4.03916	43.8	chromosome:NZ_CP007409.1/CP007409.1	-	1	4163	3952	6/13/14	3/24/17	Complete Genome	NCAUR-ARS-USDA	SAMN02673193	GCA_000706705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/705/GCA_000706705.1_ASM70670v1	-	OH 131.1
Enterobacter hormaechei YT3	1260282	PRJNA180991	180991	Proteobacteria	Gammaproteobacteria	4.80936	55.5	-	ANID01	12	4678	4485	12/31/12	5/18/17	Scaffold	BGI Research Institution	SAMN02469366	GCA_000328885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/885/GCA_000328885.1_SOAPdenovo	-	YT3
Actinomyces oris	544580	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.22944	68.3	-	MSKS01	88	2716	2526	1/5/17	4/6/17	Scaffold	King's College London	SAMN05898722	GCA_001937445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/445/GCA_001937445.1_ASM193744v1	-	WE8B-23
Haemophilus parainfluenzae	729	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.9058	39.6	-	JUOR01	86	1860	1786	7/10/15	4/3/17	Contig	University of Washington	SAMN03198109	GCA_001059815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/815/GCA_001059815.1_ASM105981v1	26230489	901_HPAR
Agrobacterium sp. LC34	1643810	PRJNA281572	281572	Proteobacteria	Alphaproteobacteria	5.60158	59.4	-	LBHX01	33	5386	5183	5/11/15	4/10/17	Contig	Monash University Malaysia	SAMN03491904	GCA_001005815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/815/GCA_001005815.1_ASM100581v1	-	LC34
Streptococcus parasanguinis	1318	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.1505	41.7	-	JVIX01	171	2111	2001	7/10/15	4/3/17	Contig	University of Washington	SAMN03197583	GCA_001071035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/035/GCA_001071035.1_ASM107103v1	26230489	392_SPAR
Fusobacterium necrophorum DJ-2	1441737	PRJNA232682	232682	Fusobacteria	Fusobacteriia	2.52081	34	-	JAAH01	226	2330	2149	5/15/14	4/2/17	Contig	"Newport Laboratories, A Sanofi company"	SAMN02781280	GCA_000691745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/745/GCA_000691745.1_FnecDJ-2v1.0	-	DJ-2
[Clostridium] clostridioforme AGR2157	1280695	PRJNA185707	185707	Terrabacteria group	Firmicutes	4.94316	49	-	AUJR01	133	5009	4358	7/10/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02440671	GCA_000424325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/325/GCA_000424325.1_ASM42432v1	-	AGR2157
Citrobacter freundii 4_7_47CFAA	742730	PRJNA46379	46379	Proteobacteria	Gammaproteobacteria	5.12267	52.1	-	ADLG01	11	5101	4774	12/16/11	4/10/17	Scaffold	Broad Institute	SAMN02463852	GCA_000238735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/735/GCA_000238735.1_Citr_freu_4_7_47CFAA_V1	-	4_7_47CFAA
Leptospira santarosai str. HAI1380	1049982	PRJNA74157	74157	Spirochaetes	Spirochaetia	3.99038	41.8	-	AHOJ02	38	4005	3703	1/24/12	4/1/17	Contig	J. Craig Venter Institute	SAMN02436497	GCA_000244655.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/655/GCA_000244655.3_gls454171v2.0	-	HAI1380
Taylorella equigenitalis	29575	PRJNA294225	294225	Proteobacteria	Betaproteobacteria	1.67025	37.5	-	LIYJ01	18	1549	1404	9/3/15	4/11/17	Contig	University of Pretoria	SAMN04017970	GCA_001278685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/685/GCA_001278685.1_ASM127868v1	26472845	ERC_G2224
Mycoplasma ovipneumoniae 14811	1188239	PRJNA164759	164759	Terrabacteria group	Tenericutes	1.0715	29.2	-	JFAD01	56	769	700	3/12/14	4/2/17	Contig	EVOLMYCO	SAMN02952979	GCA_000590415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/415/GCA_000590415.1_Version_1.0	-	14811
Streptococcus gallolyticus subsp. gallolyticus	53354	PRJNA275836	275836	Terrabacteria group	Firmicutes	2.31142	37.5	-	JYKU01	17	2332	2213	3/6/15	4/3/17	Contig	Alliance de Recherche sur les Maladies Infectieuses Nantes-Angers	SAMN03353742	GCA_000949245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/245/GCA_000949245.1_SG099Q	25908147	NTS 31106099
Acinetobacter haemolyticus	29430	PRJNA312398	312398	Proteobacteria	Gammaproteobacteria	3.46286	39.1	-	LSVD01	53	3302	3177	2/26/16	4/5/17	Contig	University of Houston	SAMN04497771	GCA_001575095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/095/GCA_001575095.1_ASM157509v1	-	JKSF06
Bacillus subtilis PY79	1415167	PRJNA225627	225627	Terrabacteria group	Firmicutes	4.03346	43.8	chromosome:NC_022898.1/CP006881.1	-	1	4187	4019	11/19/13	3/24/17	Complete Genome	University of Michigan	SAMN02641633	GCA_000497485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/485/GCA_000497485.1_ASM49748v1	24356846	PY79
Pantoea ananatis BD442	1378092	PRJNA245793	245793	Proteobacteria	Gammaproteobacteria	4.79855	53.6	-	JMJL01	11	4555	4390	6/18/14	4/2/17	Contig	Centre for Microbial Ecology and Genomics	SAMN02739895	GCA_000709995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/995/GCA_000709995.1_PABD442-3.0	"2,488,452,025,103,750"	BD442
Streptococcus anginosus SK52 = DSM 20563	1000570	PRJNA64677	64677	Terrabacteria group	Firmicutes	1.89239	38.7	-	AFIM01	109	1866	1701	5/23/11	3/30/17	Contig	J. Craig Venter Institute	SAMN00621698	GCA_000214555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/555/GCA_000214555.2_ASM21455v1	-	SK52
Streptococcus constellatus	76860	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.91346	37.9	-	JUTC01	69	1889	1750	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197994	GCA_001074375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/375/GCA_001074375.1_ASM107437v1	26230489	783_SANG
Staphylococcus lugdunensis	28035	PRJNA382360	382360	Terrabacteria group	Firmicutes	2.49164	33.8	chromosome:CP020763.1	-	1	2397	2293	4/18/17	5/1/17	Chromosome	EA7290	SAMN06704779	GCA_002096135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/135/GCA_002096135.1_ASM209613v1	-	VISLISI_25
Bacillus subtilis subsp. spizizenii TU-B-10	1052585	PRJNA68561	68561	Terrabacteria group	Firmicutes	4.20722	43.8	chromosome:NC_016047.1/CP002905.1	-	1	4315	4077	10/5/11	6/15/17	Complete Genome	Institute for Genome Sciences	SAMN02603352	GCA_000227465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/465/GCA_000227465.1_ASM22746v1	22493193	TU-B-10
Bacillus cytotoxicus	580165	PRJNA394959	394959	Terrabacteria group	Firmicutes	4.28209	35.8	-	NOKK01	4	4461	4009	8/14/17	8/16/17	Contig	University of Zurich	SAMN07367955	GCA_002251055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/055/GCA_002251055.1_ASM225105v1	-	CH_1
Acinetobacter pittii D499	1086014	PRJNA73129	73129	Proteobacteria	Gammaproteobacteria	4.10382	38.823	plasmid pAB_D499:NZ_AGFH01000030.1/AGFH01000030.1	AGFH01	30	4037	3811	10/13/11	3/30/17	Contig	Beijing Genomics Institute	SAMN02469352	GCA_000230465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/465/GCA_000230465.2_ASM23046v1	22156399	D499
Xanthomonas euvesicatoria	456327	PRJNA275504	275504	Proteobacteria	Gammaproteobacteria	5.37238	64.5	-	JZRS01	139	4851	4435	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03349341	GCA_001009205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/205/GCA_001009205.1_ASM100920v1	-	689
Pseudomonas amygdali pv. hibisci	251723	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	6.11148	58.4	-	LJQN01	156	5678	5334	10/20/15	4/4/17	Scaffold	University of Toronto	SAMN03976277	GCA_001400395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/395/GCA_001400395.1_PhiICMP9623	-	ICMP9623
Brucella sp. F23/97	437670	PRJNA176540	176540	Proteobacteria	Alphaproteobacteria	3.31251	57.2	-	AQKR01	56	3400	3140	4/16/13	4/17/17	Scaffold	Broad Institute	SAMN01047751	GCA_000370965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/965/GCA_000370965.1_Bruc_sp_F23_97_V1	-	F23/97
Enterobacter asburiae	61645	PRJNA269998	269998	Proteobacteria	Gammaproteobacteria	4.84473	56.1	-	JWPV01	120	4740	4467	12/31/14	4/20/17	Contig	University of Malaya	SAMN03261526	GCA_000812425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/425/GCA_000812425.1_ASM81242v1	-	GN1
Parageobacillus thermoglucosidans	1426	PRJNA324718	324718	Terrabacteria group	Firmicutes	4.38293	43.4	-	LZRS01	244	4449	4053	5/30/17	5/30/17	Contig	Instituto de Quimica	SAMN05223358	GCA_002159055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/055/GCA_002159055.1_ASM215905v1	-	-
Vibrio coralliilyticus	190893	PRJNA242743	242743	Proteobacteria	Gammaproteobacteria	5.43504	45.7	-	JXXS01	64	5022	4903	4/1/15	4/3/17	Contig	Technical University of Denmark	SAMN03323919	GCA_000967485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/485/GCA_000967485.1_S2043	25879706	S2043
Vibrio mimicus CAIM 1882	1400797	PRJNA219179	219179	Proteobacteria	Gammaproteobacteria	3.97976	46.7	-	AWWY01	341	3722	3287	9/30/13	9/30/13	Contig	"CIAD, A.C."	SAMN02356304	GCA_000473785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/785/GCA_000473785.1_CAIM1882_v1.0	-	CAIM 1882
Bacillus subtilis BSn5	936156	PRJNA61191	61191	Terrabacteria group	Firmicutes	4.0936	43.8	chromosome:NC_014976.1/CP002468.1	-	1	4237	4016	1/25/11	4/10/17	Complete Genome	"State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University"	SAMN02603875	GCA_000186745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/745/GCA_000186745.1_ASM18674v1	21317323	BSn5
Pediococcus acidilactici NGRI 0510Q	1229281	PRJDB499	174408	Terrabacteria group	Firmicutes	2.04708	42.1	-	BANK01	103	2027	1755	11/27/12	3/31/17	Contig	"Microbial Genetics, Institute of Genetic Resources, Faculty of Agriculture, Kyushu University"	SAMD00036646	GCA_000319265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/265/GCA_000319265.1_Plo_1.0	23405350	NGRI 0510Q
Prevotella intermedia	28131	PRJDB2896	306474	FCB group	Bacteroidetes/Chlorobi group	3.14812	43.7962	chromosome I:AP014597.1; chromosome II:AP014598.1	-	2	2857	2797	12/11/15	9/28/16	Complete Genome	Nagasaki University	SAMD00017481	GCA_002355195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/195/GCA_002355195.1_ASM235519v1	-	OMA14
Pantoea stewartii	66269	PRJNA278250	278250	Proteobacteria	Gammaproteobacteria	4.76037	53.7	-	LDSJ01	84	4468	4278	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401415	GCA_001476795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/795/GCA_001476795.1_ASM147679v1	26793183	RSA30
Vibrio fluvialis 539	1315313	PRJNA196308	196308	Proteobacteria	Gammaproteobacteria	4.99272	50	-	JQHX01	84	-	-	9/30/14	1/29/15	Contig	Rede Paraense de genômica e proteômica	SAMN03002133	GCA_000760625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/625/GCA_000760625.1_VF539_1.0	25573928	539
Acinetobacter lwoffii TG19636	1221307	PRJNA172714	172714	Proteobacteria	Gammaproteobacteria	3.49778	42.8	-	AMJG01	245	3470	3242	10/2/12	3/30/17	Contig	Translational Genomics Research Institute	SAMN02471243	GCA_000301755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/755/GCA_000301755.1_ASM30175v1	-	TG19636
Pseudoalteromonas sp. BSi20429	1097676	PRJDA74507	74507	Proteobacteria	Gammaproteobacteria	4.49578	39	-	BADV01	121	4032	3877	10/26/11	5/19/17	Contig	Shandong University	SAMD00036591	GCA_000238895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/895/GCA_000238895.2_PspBSi20429_1.0	22275105	BSi20429
Acinetobacter junii	40215	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.5396	38.3	-	BBSD01	237	3421	3145	1/23/15	4/3/17	Contig	National Institute of Technology and Evaluation	SAMD00019876	GCA_000830115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/115/GCA_000830115.1_ASM83011v1	-	KCTC 12416
Acinetobacter johnsonii	40214	PRJEB19208	369370	Proteobacteria	Gammaproteobacteria	3.70544	41.4	-	FUUY01	26	3521	3356	2/16/17	5/31/17	Contig	DTU-GE	SAMEA56643418	GCA_900162715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/715/GCA_900162715.1_ASM90016271v1	-	-
Acinetobacter calcoaceticus	471	PRJNA325212	325212	Proteobacteria	Gammaproteobacteria	4.10376	38.7	-	LZRL01	69	3996	3840	6/16/16	4/5/17	Scaffold	CSIR-National Environmental Engineering Research Institute (NEERI)	SAMN05225403	GCA_001663695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/695/GCA_001663695.1_ASM166369v1	-	EGD_AQ_BF14
Pseudomonas coronafaciens	53409	PRJNA264904	264904	Proteobacteria	Gammaproteobacteria	5.47511	57.7	-	JSED01	1981	6138	5785	11/7/14	3/19/15	Contig	Chungbuk National University	SAMN03144492	GCA_000773135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/135/GCA_000773135.1_ASM77313v1	25774107	LMG 5060
Pseudomonas savastanoi pv. glycinea str. race 4	875330	PRJNA51519	51519	Proteobacteria	Gammaproteobacteria	5.90521	58	-	AEGH01	108	5669	5075	1/28/11	5/19/17	Contig	University of Illinois at Urbana & Champaign	SAMN02471825	GCA_000187065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/065/GCA_000187065.2_ASM18706v2	21304594	race 4
Pseudomonas syringae pv. tomato	323	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	6.26143	58.5	-	LJRN01	344	5940	5515	10/20/15	4/4/17	Scaffold	University of Toronto	SAMN03976246	GCA_001401135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/135/GCA_001401135.1_PtoICMP2844	-	ICMP2844
Xanthomonas fuscans subsp. fuscans	366649	PRJNA264776	264776	Proteobacteria	Gammaproteobacteria	5.09284	64.7	-	JSBQ02	154	4602	4080	10/30/14	4/3/17	Contig	University of Exeter	SAMN03142403	GCA_000775195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/195/GCA_000775195.2_NCPPB2665v2	26500625	NCPPB 2665
Bacteroides xylanisolvens XB1A	657309	PRJNA39177	39177	FCB group	Bacteroidetes/Chlorobi group	5.97615	42.1	chromosome:FP929033.1	-	1	4466	4407	3/25/10	2/27/15	Chromosome	MetaHIT	SAMEA3138363	GCA_000210075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/075/GCA_000210075.1_ASM21007v1	-	XB1A
Achromobacter xylosoxidans	85698	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	6.59002	67.7	-	JUZW01	990	6329	5609	7/10/15	4/3/17	Contig	University of Washington	SAMN03197818	GCA_001057605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/605/GCA_001057605.1_ASM105760v1	26230489	618_AXYL
Streptococcus oralis	1303	PRJNA304333	304333	Terrabacteria group	Firmicutes	2.05238	41.5	-	LQOB01	139	2027	1688	3/2/16	4/5/17	Scaffold	University of Kaiserslautern	SAMN04325028	GCA_001578945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/945/GCA_001578945.1_ASM157894v1	27303717	DD16
Streptomyces griseus subsp. griseus	67263	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.3412	73.4	-	JOGU01	240	6413	5959	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645463	GCA_000719495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/495/GCA_000719495.1_ASM71949v1	-	NRRL F-5621
Acinetobacter nosocomialis	106654	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.98041	38.7	-	BBOT01	90	3848	3649	11/8/14	4/2/17	Contig	National Institute of Technology and Evaluation	SAMD00020344	GCA_000775795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/795/GCA_000775795.1_ASM77579v1	-	NBRC 110500
Ruminococcus flavefaciens	1265	PRJEB15819	347770	Terrabacteria group	Firmicutes	3.66371	43.2	-	FNWV01	32	3210	3054	10/27/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910265	GCA_900108555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/555/GCA_900108555.1_IMG-taxon_2593339145_annotated_assembly	-	YAD2003
Klebsiella variicola	244366	PRJNA201935	201935	Proteobacteria	Gammaproteobacteria	5.66788	57.2	-	AYJK01	6	5602	5334	10/30/13	7/24/17	Scaffold	Broad Institute	SAMN02138560	GCA_000493095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/095/GCA_000493095.1_Kleb_pneu_MGH_20_V1	-	MGH 20
Bacillus atrophaeus Detrick-2	720557	PRJNA46079	46079	Terrabacteria group	Firmicutes	4.12117	43.1	-	AEFQ01	47	4217	3981	4/19/11	6/15/17	Contig	Transformational Medical Technologies Program	SAMN01816419	GCA_000204745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/745/GCA_000204745.2_ASM20474v2	21464989	Detrick-2
Lactobacillus iners LEAF 2052A-d	879302	PRJNA52043	52043	Terrabacteria group	Firmicutes	1.32232	32.7	-	AEKI01	28	1292	1220	11/4/10	3/30/17	Contig	J. Craig Venter Institute	SAMN00115041	GCA_000179955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/955/GCA_000179955.1_ASM17995v1	-	LEAF 2052A-d
Rhodococcus hoagii	43767	PRJNA316970	316970	Terrabacteria group	Actinobacteria	5.12045	68.8	-	LXFI01	29	4735	4631	4/4/17	6/6/17	Contig	The University of Edinburgh	SAMN04910115	GCA_002078535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/535/GCA_002078535.1_ASM207853v1	27638249	PAM1572
Corynebacterium striatum	43770	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.82908	59.3	-	JVCW01	91	2628	2430	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197740	GCA_001076975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/975/GCA_001076975.1_ASM107697v1	26230489	542_CAUR
Eikenella corrodens	539	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	2.36143	55.7	-	JVFA01	106	2353	2194	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197684	GCA_001076785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/785/GCA_001076785.1_ASM107678v1	26230489	491_NMEN
Staphylococcus warneri	1292	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.46616	32.6	-	JUWX01	83	2356	2291	7/10/15	4/3/17	Contig	University of Washington	SAMN03197895	GCA_001073945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/945/GCA_001073945.1_ASM107394v1	26230489	691_SWAR
Staphylococcus capitis	29388	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.58486	32.9	-	JVCF01	40	2478	2392	7/10/15	4/3/17	Contig	University of Washington	SAMN03197757	GCA_001063695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/695/GCA_001063695.1_ASM106369v1	26230489	558_SAUR
Staphylococcus hominis	1290	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.24291	31.3	-	JVQD01	52	2185	2101	7/10/15	4/3/17	Contig	University of Washington	SAMN03197395	GCA_001071725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/725/GCA_001071725.1_ASM107172v1	26230489	202_SEPI
Lactobacillus paracasei subsp. paracasei ATCC 25302	525337	PRJNA31513	31513	Terrabacteria group	Firmicutes	2.99174	46.6	-	ACGY01	73	3028	2806	2/20/09	3/30/17	Scaffold	Baylor College of Medicine	SAMN00001470	GCA_000159495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/495/GCA_000159495.1_ASM15949v1	-	ATCC 25302
Providencia rettgeri	587	PRJNA257412	257412	Proteobacteria	Gammaproteobacteria	5.82331	40.4	-	LYBX01	18	5473	4100	7/6/16	7/6/16	Contig	University of Sao Paulo	SAMN05013690	GCA_001680125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/125/GCA_001680125.1_ASM168012v1	-	729/12
Bifidobacterium pseudocatenulatum	28026	PRJDB4597	325619	Terrabacteria group	Actinobacteria	2.18207	56.3	-	BCYA01	72	1796	1669	6/10/16	4/5/17	Contig	Yakult Central Institute	SAMD00047611	GCA_001686005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/005/GCA_001686005.1_ASM168600v1	27340092	CA-C29
Providencia alcalifaciens 205/92	1256988	PRJNA181044	181044	Proteobacteria	Gammaproteobacteria	4.20749	41.7	-	JALD01	88	4049	3848	1/31/14	4/2/17	Contig	JCVI	SAMN02641579	GCA_000527335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/335/GCA_000527335.1_Pal20592v1.0	-	205/92
Gardnerella vaginalis JCP8151B	1261068	PRJNA181323	181323	Terrabacteria group	Actinobacteria	1.55414	42.2	-	ATJH01	156	1357	1176	6/25/13	4/1/17	Scaffold	Washington University	SAMN02436771	GCA_000414485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/485/GCA_000414485.1_ASM41448v1	-	JCP8151B
Paenibacillus larvae subsp. pulvifaciens	1477	PRJNA362897	362897	Terrabacteria group	Firmicutes	4.79487	43.7867	chromosome:NZ_CP020557.1/CP020557.1; plasmid pPLP3:NZ_CP020558.1/CP020558.1	-	2	5072	4293	4/10/17	4/13/17	Complete Genome	CT Agric Expt Station	SAMN06547380	GCA_002082155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/155/GCA_002082155.1_ASM208215v1	-	SAG 10367
Lactobacillus ruminis DSM 20403 = NBRC 102161	1423798	PRJDB1356	231413	Terrabacteria group	Firmicutes	1.99427	43.4	-	BCVU01	136	1975	1831	2/27/16	4/5/17	Contig	National Institute of Technology and Evaluation	SAMD00046918	GCA_001591905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/905/GCA_001591905.1_ASM159190v1	-	NBRC 102161
Lactobacillus jensenii IM18-3	1434654	PRJNA231005	231005	Terrabacteria group	Firmicutes	1.68782	34.4	-	AZNM01	103	1681	1588	5/22/15	4/3/17	Scaffold	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN02438380	GCA_001012685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/685/GCA_001012685.1_IM18-3v1	-	IM18-3
Streptococcus intermedius ATCC 27335	1316583	PRJNA197004	197004	Terrabacteria group	Firmicutes	1.95145	37.7	-	ATFK01	10	1953	1822	6/21/13	4/1/17	Contig	Broad Institute	SAMN02596988	GCA_000413475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/475/GCA_000413475.1_Stre_inte_ATCC_27335_V1	-	ATCC 27335
Streptomyces albus subsp. albus	67257	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.8459	72.7	-	JODZ01	98	6668	6330	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645223	GCA_000720885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/885/GCA_000720885.1_ASM72088v1	-	NRRL B-2362
Rothia mucilaginosa	43675	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.30824	59.5	-	JVST01	38	1815	1728	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197327	GCA_001061655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/655/GCA_001061655.1_ASM106165v1	26230489	138_RMUC
Aggregatibacter actinomycetemcomitans DSM 8324	1120957	PRJNA165361	165361	Proteobacteria	Gammaproteobacteria	2.08589	44.4	-	AQUU01	33	2139	1949	4/19/13	4/1/17	Contig	DOE Joint Genome Institute	SAMN02256508	GCA_000372365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/365/GCA_000372365.1_ASM37236v1	-	DSM 8324
Lactobacillus crispatus	47770	PRJNA272101	272101	Terrabacteria group	Firmicutes	2.38979	36.5	-	LSQY01	215	2444	2298	2/18/16	4/4/17	Scaffold	The Genome Institute at Washington University	SAMN03854351	GCA_001563615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/615/GCA_001563615.1_ASM156361v1	-	PSS7772C
Dickeya zeae DZ2Q	1306951	PRJNA193475	193475	Proteobacteria	Gammaproteobacteria	4.64652	53.2	-	APMV01	26	4176	3953	5/31/13	4/1/17	Contig	International Centre for Genetic Engineering and Biotechnology	SAMN02469908	GCA_000404105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/105/GCA_000404105.1_DiZe_1.0	24201194	DZ2Q
Brachyspira hyodysenteriae	159	PRJNA272555	272555	Spirochaetes	Spirochaetia	3.00951	27	-	JXNA01	105	2616	2497	5/26/15	4/3/17	Scaffold	Murdoch University	SAMN03283750	GCA_001012935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/935/GCA_001012935.1_ASM101293v1	26098837	865
Mycobacterium kansasii 732	1299327	PRJNA191791	191791	Terrabacteria group	Actinobacteria	6.45691	66.2	-	JANZ01	44	5906	4531	1/27/14	4/10/17	Contig	Institute for Genome Sciences	SAMN02641607	GCA_000524055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/055/GCA_000524055.1_ASM52405v1	-	732
Pectobacterium carotovorum subsp. brasiliensis PBR1692	558269	PRJNA31121	31121	Proteobacteria	Gammaproteobacteria	4.91857	51.9	-	ABVX01	1370	4359	4099	9/9/08	5/19/17	Contig	University of Wisconsin	SAMN02472014	GCA_000173135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/135/GCA_000173135.1_ASM17313v1	18986251	PBR1692
Variovorax paradoxus	34073	PRJNA294421	294421	Proteobacteria	Betaproteobacteria	9.58872	69.2	-	LKTW01	324	8952	8586	10/19/15	4/11/17	Contig	US EPA	SAMN04146765	GCA_001399565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/565/GCA_001399565.1_ASM139956v1	-	H090
Streptococcus equinus	1335	PRJEB15969	348300	Terrabacteria group	Firmicutes	1.79985	37.2	-	FMTH01	11	1744	1696	10/14/16	4/5/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02910449	GCA_900100035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/035/GCA_900100035.1_IMG-taxon_2593339267_annotated_assembly	-	GA-1
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.73566	47.6	-	MDZM01	83	3436	3270	11/17/16	4/5/17	Contig	The University of Queensland	SAMN04320388	GCA_001880425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/425/GCA_001880425.1_ASM188042v1	-	88/4281-4
Candidatus Liberibacter asiaticus	34021	PRJNA361117	361117	Proteobacteria	Alphaproteobacteria	1.252	36.5	-	MTIM01	71	1178	1023	1/23/17	4/17/17	Contig	"Crop Diseases, Pests, Genetics Research Unit, San Joaquin Valley Agricultural Sciences Center"	SAMN06220462	GCA_001969535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/535/GCA_001969535.1_ASM196953v1	-	TX2351
Caldicellulosiruptor bescii	31899	PRJEB19708	377500	Terrabacteria group	Firmicutes	2.95964	35.2	-	FUZL01	3	2857	2630	3/9/17	3/18/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216292	GCA_900168145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/145/GCA_900168145.1_IMG-taxon_2667527207_annotated_assembly	-	MACB1019
Escherichia albertii	208962	PRJDB3047	301492	Proteobacteria	Gammaproteobacteria	4.89898	49.6	-	BBVF01	137	5081	4645	11/6/15	2/25/17	Scaffold	University of Miyazaki	SAMD00026625	GCA_001514575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/575/GCA_001514575.1_ASM151457v1	26537224	24
Edwardsiella tarda	636	PRJNA357015	357015	Proteobacteria	Gammaproteobacteria	3.76083	57.2	-	MSSL01	221	3509	3367	2/27/17	3/2/17	Contig	Universidade de Santiago de Compostela	SAMN06131423	GCA_002006945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/945/GCA_002006945.1_ASM200694v1	-	NCIMB2034
Anoxybacillus flavithermus	33934	PRJNA314192	314192	Terrabacteria group	Firmicutes	2.64888	41.1	-	LUCQ01	187	2898	2678	5/25/16	4/5/17	Scaffold	NIZO food research	SAMN04532071	GCA_001651545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/545/GCA_001651545.1_ASM165154v1	-	AF16
Sorangium cellulosum	56	PRJNA237840	237840	Proteobacteria	delta/epsilon subdivisions	11.5825	71.3	-	JELZ01	2875	9369	7852	3/11/16	3/11/16	Scaffold	Shandong University	SAMN02639825	GCA_001589275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/589/275/GCA_001589275.1_sce3192.1	-	So0003-19-2
Mycobacterium intracellulare	1767	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.6603	67.9	-	LZIO01	175	5421	5197	6/17/16	4/5/17	Contig	JCVI	SAMN04692027	GCA_001667355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/355/GCA_001667355.1_ASM166735v1	-	852002-53206_SCH5915646
Xanthomonas albilineans	29447	PRJNA269920	269920	Proteobacteria	Gammaproteobacteria	3.80155	62.9	-	JZIF01	4	3270	3014	3/25/15	4/3/17	Contig	CIRAD	SAMN03257639	GCA_000963075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/075/GCA_000963075.1_Xal-MTQ032-G1	-	MTQ032
Arcobacter butzleri L350	1447258	PRJNA233527	233527	Proteobacteria	delta/epsilon subdivisions	2.28547	26.9	-	JAIX01	90	2260	2165	5/19/15	4/3/17	Scaffold	Agriculture and Agri-Foods Canada	SAMN02581418	GCA_001010665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/665/GCA_001010665.1_A.butzleri_L350_1.0	25947176	L350
Lactobacillus sakei	1599	PRJNA260124	260124	Terrabacteria group	Firmicutes	2.1859	40.6	-	JRFY01	155	2213	1940	9/17/14	4/10/17	Contig	WIKIM	SAMN03024089	GCA_000755625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/625/GCA_000755625.1_ASM75562v1	25502679	wikim 22
Lactobacillus johnsonii 16	1033983	PRJNA67007	67007	Terrabacteria group	Firmicutes	1.78777	34.6	-	LIGY01	156	1755	1618	8/19/15	4/4/17	Contig	"Technion - Israel Institute of Technology, Faculty of Biotechnology & Food Engineering, Laboratory of Applied Genomics"	SAMN03995694	GCA_001270785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/785/GCA_001270785.1_ASM127078v1	26450724	16
Rhodococcus erythropolis NBRC 15567	1219014	PRJDB293	172261	Terrabacteria group	Actinobacteria	6.58893	62.4	-	BCRM01	67	6147	5981	2/6/16	4/4/17	Contig	National Institute of Technology and Evaluation	SAMD00046519	GCA_001552595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/595/GCA_001552595.1_ASM155259v1	-	NBRC 15567
Akkermansia muciniphila	239935	PRJEB21068	396410	PVC group	Verrucomicrobia	2.6155	55.7	-	FXXX01	77	2291	2200	7/29/17	8/7/17	Scaffold	"WAGENINGEN UNIVERSITY, LABORATORY OF SYSTEMS AND SYNTHETIC BIOLOGY."	SAMEA104102601	GCA_900184845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/184/845/GCA_900184845.1_Chimpanzee_1.fasta	-	-
Clostridium butyricum DKU-01	1306409	PRJNA193356	193356	Terrabacteria group	Firmicutes	4.51972	28.6	-	APKZ01	79	4010	3836	4/5/13	5/18/17	Contig	"Chunlab, Inc."	SAMN02469601	GCA_000355785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/785/GCA_000355785.1_CloButy1.0	25861391	DKU-01
Flavobacterium psychrophilum	96345	PRJNA256262	256262	FCB group	Bacteroidetes/Chlorobi group	2.8479	32.6	chromosome:NZ_CP010275.2/CP010275.2	-	1	2562	2448	4/13/15	4/4/17	Chromosome	University of Copenhagen	SAMN02941921	GCA_000971605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/605/GCA_000971605.2_ASM97160v2	-	MH1
Lysinibacillus sphaericus	1421	PRJNA315683	315683	Terrabacteria group	Firmicutes	4.66884	37.3	-	LWHI01	3	4574	4279	4/19/16	4/5/17	Contig	CIMIC Uniandes	SAMN04568413	GCA_001623495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/495/GCA_001623495.1_ASM162349v1	-	OT4b.49
Finegoldia magna	1260	PRJNA383659	383659	Terrabacteria group	Firmicutes	1.99002	31.8	-	NDYC01	67	1952	1832	8/7/17	8/9/17	Contig	Aarhus University	SAMN06769908	GCA_002243095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/095/GCA_002243095.1_ASM224309v1	-	CCUG 54800
Campylobacter concisus	199	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	2.61245	61.9	-	MKAX01	954	2184	2087	10/4/16	10/4/16	Contig	University of California at Davis	SAMN04532245	GCA_001764565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/565/GCA_001764565.1_ASM176456v1	-	BCW_4722
Waddlia chondrophila WSU 86-1044	716544	PRJNA43761	43761	PVC group	Chlamydiae	2.13191	43.7547	chromosome:NC_014225.1/CP001928.1; plasmid pWc:NC_014226.1/CP001929.1	-	2	1933	1854	6/3/10	3/22/17	Complete Genome	"Institute of Microbiology, University Hospital Center and University of Lausanne, Switzerland"	SAMN02603402	GCA_000092785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/785/GCA_000092785.1_ASM9278v1	20531937	WSU 86-1044
Bacillus subtilis	1423	PRJNA391556	391556	Terrabacteria group	Firmicutes	4.16902	43.7475	chromosome:NZ_CP022287.1/CP022287.1; plasmid pSX01705-1:NZ_CP022288.1/CP022288.1; plasmid pSX01705-2:NZ_CP022289.1/CP022289.1	-	3	4299	4095	7/10/17	7/12/17	Complete Genome	Beijing Academy of Agricultural And Forestry Sciences	SAMN07270555	GCA_002216085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/085/GCA_002216085.1_ASM221608v1	-	SX01705
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.92447	67.2	-	LOTM01	85	7183	6803	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449148	GCA_001522035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/035/GCA_001522035.1_ASM152203v1	-	RF32-BP3
Propionibacterium freudenreichii	1744	PRJEB6437	270201	Terrabacteria group	Actinobacteria	2.57637	67.3	-	CDAC01	63	2279	2150	3/21/15	4/4/17	Scaffold	INRA STLO	SAMEA2826826	GCA_001368975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/975/GCA_001368975.1_CIRM-BIA527	-	CIRM-BIA 527
Lactobacillus amylophilus DSM 20533 = JCM 1125	1423721	PRJNA357931	357931	Terrabacteria group	Firmicutes	1.61035	43.7	chromosome:NZ_CP018888.1/CP018888.1	-	1	1675	1560	1/5/17	4/16/17	Complete Genome	Kyungpook National University	SAMN06162176	GCA_001936335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/335/GCA_001936335.1_ASM193633v1	-	DSM 20533
Paenibacillus sp. FSL H7-0737	1536775	PRJNA258345	258345	Terrabacteria group	Firmicutes	6.76588	43.7	chromosome:NZ_CP009279.1/CP009279.1	-	1	5961	5755	9/26/14	4/9/17	Complete Genome	Cornell University	SAMN02996505	GCA_000758545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/545/GCA_000758545.1_ASM75854v1	-	FSL H7-0737
Yersinia intermedia	631	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	5.1109	47.8	-	CQBB01	156	4809	4562	3/22/15	4/4/17	Scaffold	SC	SAMEA859871	GCA_001166625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/625/GCA_001166625.1_4821_6_10	-	821/84
Leuconostoc citreum	33964	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.73355	38.7	-	DGGJ01	115	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452811	GCA_002392135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/135/GCA_002392135.1_ASM239213v1	28894102	-
Paenibacillus sp. FSL R5-0345	1536770	PRJNA258347	258347	Terrabacteria group	Firmicutes	6.78717	43.7	chromosome:NZ_CP009281.1/CP009281.1	-	1	6037	5813	9/22/14	4/9/17	Complete Genome	Cornell University	SAMN02996514	GCA_000758585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/585/GCA_000758585.1_ASM75858v1	-	FSL R5-0345
Bacillus coagulans DSM 1 = ATCC 7050	1121088	PRJNA167728	167728	Terrabacteria group	Firmicutes	3.01804	47.2	-	ALAS01	307	3110	2839	8/16/12	3/30/17	Contig	Shanghai Jiao Tong Univeristy	SAMN02470949	GCA_000290615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/615/GCA_000290615.1_ASM29061v1	23105047	DSM 1
Vibrio sp. ZOR0018	1339225	PRJNA205566	205566	Proteobacteria	Gammaproteobacteria	4.07471	44.2	-	JTLH01	172	3747	3565	12/8/14	4/9/17	Scaffold	University of Oregon	SAMN03021529	GCA_000798995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/995/GCA_000798995.1_ZOR0018.1	-	ZOR0018
Staphylococcus saprophyticus	29385	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.62884	33	-	LMZJ01	37	2601	2436	9/28/16	4/5/17	Contig	Tufts University	SAMN04244242	GCA_001747475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/475/GCA_001747475.1_ASM174747v1	-	AC34
Streptococcus sanguinis SK1 = NCTC 7863	888807	PRJNA53155	53155	Terrabacteria group	Firmicutes	2.28048	43.3	-	AFAZ01	7	2257	2168	4/4/11	3/30/17	Scaffold	Baylor College of Medicine	SAMN00253318	GCA_000194945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/945/GCA_000194945.1_ASM19494v1	-	SK1
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.22146	36.7	-	LPRC01	16	2325	2196	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305136	GCA_001559955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/955/GCA_001559955.1_GG12_C01_01	-	GG12-C01-01
Bacillus weihenstephanensis	86662	PRJNA318344	318344	Terrabacteria group	Firmicutes	5.67477	35.2	-	LXLW01	128	5949	5544	10/12/16	4/5/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04819589	GCA_001757875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/875/GCA_001757875.1_ASM175787v1	-	GOE12
Photobacterium angustum	661	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.90998	39.5	-	JZSM01	139	4414	3856	3/10/15	4/3/17	Contig	FDA/CFSAN	SAMN03295483	GCA_000950255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/255/GCA_000950255.1_CFSAN029435_01.0	-	ATCC 33975
Parabacteroides distasonis	823	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	5.52618	45.1	-	CZAR01	61	4848	4550	10/1/15	6/12/17	Contig	SC	SAMEA3545364	GCA_001404395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/395/GCA_001404395.1_14207_7_24	-	2789STDY5834901
Kangiella koreensis DSM 16069	523791	PRJNA29443	29443	Proteobacteria	Gammaproteobacteria	2.85207	43.7	chromosome:NC_013166.1/CP001707.1	-	1	2665	2605	8/28/09	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002604	GCA_000024085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/085/GCA_000024085.1_ASM2408v1	21304661	DSM 16069
Shewanella woodyi ATCC 51908	392500	PRJNA17455	17455	Proteobacteria	Gammaproteobacteria	5.9354	43.7	chromosome:NC_010506.1/CP000961.1	-	1	5069	4858	3/13/08	4/28/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598391	GCA_000019525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/525/GCA_000019525.1_ASM1952v1	-	ATCC 51908
Neisseria lactamica	486	PRJNA384053	384053	Proteobacteria	Betaproteobacteria	2.12318	52.3	-	NGBO01	60	-	-	9/20/17	9/22/17	Contig	Harvard T.H. Chan School of Public Health	SAMN06827272	GCA_002318615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/615/GCA_002318615.1_ASM231861v1	28904187	NlUS07x1
Listeria ivanovii FSL F6-596	702454	PRJNA42855	42855	Terrabacteria group	Firmicutes	3.13339	35.7137	chromosome:CM001050.1	ADXI01	1	6339	6336	12/6/10	11/19/13	Chromosome	Life Technologies Corporation	SAMN01908947	GCA_000183925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/925/GCA_000183925.1_ASM18392v1	21126366	FSL F6-596
Moraxella catarrhalis BC7	857575	PRJNA49919	49919	Proteobacteria	Gammaproteobacteria	1.90429	41.5	-	AERI01	37	1797	1668	3/22/11	3/30/17	Contig	Center for Genomic Sciences	SAMN02393790	GCA_000193005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/005/GCA_000193005.2_ASM19300v2	21269504	BC7
Xenorhabdus bovienii str. feltiae Florida	1397852	PRJEB4320	255478	Proteobacteria	Gammaproteobacteria	4.44764	44.9	-	CBSU01	242	4093	3750	7/17/14	4/2/17	Scaffold	UWM	SAMEA3139095	GCA_000736675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/675/GCA_000736675.1_XBFFL_3524_PRJEB4320	-	feltiae Florida
Agrobacterium vitis	373	PRJNA328309	328309	Proteobacteria	Alphaproteobacteria	5.79214	57.6	-	MBEZ01	128	5229	4999	11/1/16	4/5/17	Contig	Monash University Malaysia	SAMN05369596	GCA_001860185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/185/GCA_001860185.1_ASM186018v1	-	NW221
Bacteroides vulgatus	821	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	5.19232	42.7	-	CZAN01	111	4609	4294	10/1/15	4/4/17	Contig	SC	SAMEA3545360	GCA_001405155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/155/GCA_001405155.1_14207_7_20	-	2789STDY5834897
Gluconobacter oxydans	442	PRJNA288385	288385	Proteobacteria	Alphaproteobacteria	2.81925	61	-	LHZG01	180	2715	2508	3/7/16	4/5/17	Contig	Ghent University	SAMN03799277	GCA_001580705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/705/GCA_001580705.1_ASM158070v1	-	LMG 1676
Bacillus clausii	79880	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.17125	44.6	-	NPDF01	107	4180	4038	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372737	GCA_002271695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/695/GCA_002271695.1_assembly-7894-1_v1	-	7894-1
Bacillus halodurans C-125	272558	PRJNA235	235	Terrabacteria group	Firmicutes	4.20235	43.7	chromosome:NC_002570.2/BA000004.3	-	1	4134	3950	9/10/01	5/10/17	Complete Genome	JAMSTEC	SAMD00061093	GCA_000011145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/145/GCA_000011145.1_ASM1114v1	"100,868,411,008,684,000,000,000"	C-125
Lactobacillus salivarius	1624	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.92619	32.7	-	JUTI01	56	1864	1762	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197988	GCA_001067265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/265/GCA_001067265.1_ASM106726v1	26230489	778_LSAL
Streptomyces scabiei	1930	PRJNA309426	309426	Terrabacteria group	Actinobacteria	9.83225	71.3	-	LRSS01	1464	9128	7774	2/24/16	3/13/17	Contig	University of Florida	SAMN04432926	GCA_001572115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/115/GCA_001572115.1_ASM157211v1	-	84-232
Clostridium beijerinckii	1520	PRJNA322810	322810	Terrabacteria group	Firmicutes	5.77325	29.5	-	LZZI01	346	5091	4843	2/23/17	2/25/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05170531	GCA_002006205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/205/GCA_002006205.1_ASM200620v1	-	DSM 53
Erwinia amylovora 01SFR-BO	1255306	PRJEB602	196601	Proteobacteria	Gammaproteobacteria	3.79581	53.5747	plasmid pEA29:NC_020916.1/HF560647.1	CAPA01	12	3573	3401	4/8/13	4/1/17	Contig	CeBiTec	SAMEA2272727	GCA_000367605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/605/GCA_000367605.2_ASM36760v2	-	01SFR-BO
Klebsiella oxytoca 10-5245	883120	PRJNA52143	52143	Proteobacteria	Gammaproteobacteria	6.17838	54.8	-	AGDL01	6	5977	5693	2/17/12	2/21/17	Scaffold	Broad Institute	SAMN02463895	GCA_000247875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/875/GCA_000247875.1_Kleb_oxyt_10-5245_V1	-	Oct-45
Cronobacter sakazakii	28141	PRJNA251800	251800	Proteobacteria	Gammaproteobacteria	4.54311	56.9	-	JOLJ01	112	4441	4186	10/9/15	4/4/17	Scaffold	"Nottingham Trent University, UK"	SAMN02840767	GCA_001309035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/035/GCA_001309035.1_ASM130903v1	26438044	709
Moraxella osloensis	34062	PRJDB4665	323649	Proteobacteria	Gammaproteobacteria	2.621	43.6671	chromosome:AP017381.1; plasmid pMOSL1:AP017382.1; plasmid pMOSL2:AP017383.1; plasmid pMOSL3:AP017384.1	-	4	2430	2371	5/27/16	8/4/16	Complete Genome	Kazusa DNA Research Institute	SAMD00048857	GCA_002355615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/615/GCA_002355615.1_ASM235561v1	-	KMC41
Anoxybacillus amylolyticus	294699	PRJNA315823	315823	Terrabacteria group	Firmicutes	3.15827	43.6322	chromosome:NZ_CP015438.1/CP015438.1; plasmid pDSM15939_1:NZ_CP015439.1/CP015439.1; plasmid pDSM15939_2:NZ_CP015440.1/CP015440.1	-	3	3314	3067	4/29/16	4/17/17	Complete Genome	Los Alamos National Laboratory	SAMN04570556	GCA_001634285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/285/GCA_001634285.1_ASM163428v1	16682297	DSM 15939
Mycoplasma bovis	28903	PRJNA306895	306895	Terrabacteria group	Tenericutes	0.94353	29.3	-	LQED01	74	814	737	1/4/17	4/6/17	Contig	"University of California, Davis"	SAMN04366525	GCA_001929605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/605/GCA_001929605.1_ASM192960v1	-	2497MB
Campylobacter lari	201	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.49344	29.6	-	MJVX01	23	1537	1469	10/4/16	4/5/17	Scaffold	University of California at Davis	SAMN03359140	GCA_001761945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/945/GCA_001761945.1_ASM176194v1	-	BCW_3783
Brucella ovis IntaBari-2008-114-542	1293919	PRJNA189531	189531	Proteobacteria	Alphaproteobacteria	3.29067	57.2	-	AQIN01	22	3407	3030	4/16/13	4/1/17	Contig	Broad Institute	SAMN01921152	GCA_000365985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/985/GCA_000365985.1_Bruc_ovis_IntaBari-2008-114-542_V1	-	IntaBari-2008-114-542
Moorella thermoacetica	1525	PRJNA330911	330911	Terrabacteria group	Firmicutes	2.58512	55.9	-	MDDE01	26	2610	2479	11/10/16	4/5/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05430238	GCA_001875265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/265/GCA_001875265.1_ASM187526v1	-	DSM 7417
Photorhabdus luminescens	29488	PRJNA296855	296855	Proteobacteria	Gammaproteobacteria	5.42003	42.7	-	LOIC01	105	4679	4282	7/13/16	4/11/17	Scaffold	Goethe University	SAMN04110142	GCA_001684335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/684/335/GCA_001684335.1_ASM168433v1	-	PB45.5
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.47396	32.7	-	CVRV01	69	2427	2328	6/4/15	3/26/17	Contig	SC	SAMEA1035037	GCA_001047775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/775/GCA_001047775.1_7068_7_27	-	96671
Bacillus sp. YP1	1574141	PRJNA267752	267752	Terrabacteria group	Firmicutes	4.15357	43.6258	chromosome:NZ_CP010014.1/CP010014.1; plasmid pBUYP1:NZ_CP010015.1/CP010015.1	-	2	4271	4068	2/19/15	4/10/17	Complete Genome	Beihang University	SAMN03200166	GCA_000877815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/815/GCA_000877815.1_ASM87781v1	-	YP1
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.71776	67.3	-	LOWF01	107	6074	5803	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449225	GCA_001523615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/615/GCA_001523615.1_ASM152361v1	-	FL-1-2-10-S1-D0
Brevibacterium linens	1703	PRJNA387187	387187	Terrabacteria group	Actinobacteria	3.87566	62.9	-	NRHB01	45	3559	3406	9/21/17	9/23/17	Scaffold	"Dutton Lab, UCSD"	SAMN07141149	GCA_002332445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/445/GCA_002332445.1_ASM233244v1	28644126	341_13
Chromobacterium violaceum	536	PRJNA369804	369804	Proteobacteria	Betaproteobacteria	4.77897	64.6	-	MUKS01	52	4430	4256	4/6/17	4/8/17	Contig	Centers for Disease Control and Prevention	SAMN06294334	GCA_002081775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/775/GCA_002081775.1_ASM208177v1	-	16-454
Ruminococcus albus 7 = DSM 20455	697329	PRJNA42255	42255	Terrabacteria group	Firmicutes	4.48209	43.6142	chromosome:NC_014833.1/CP002403.1; plasmid pRUMAL01:NC_014824.1/CP002404.1; plasmid pRUMAL02:NC_014825.1/CP002405.1; plasmid pRUMAL03:NC_014826.1/CP002406.1; plasmid pRUMAL04:NC_014827.1/CP002407.1	-	5	4071	3860	12/23/10	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00016988	GCA_000179635.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/635/GCA_000179635.2_ASM17963v2	21914885	7
Bacillus subtilis	1423	PRJNA401163	401163	Terrabacteria group	Firmicutes	4.07294	43.6	chromosome:NZ_CP023257.1/CP023257.1	-	1	4303	3977	9/12/17	9/14/17	Complete Genome	Northwest University for Nationalities	SAMN07598856	GCA_002290305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/305/GCA_002290305.1_ASM229030v1	-	TLO3
Bacillus subtilis	1423	PRJNA384709	384709	Terrabacteria group	Firmicutes	4.01426	43.6	chromosome:NZ_CP022890.1/CP022890.1	-	1	4209	3844	8/24/17	8/27/17	Complete Genome	Dankook University	SAMN07482639	GCA_002269175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/175/GCA_002269175.1_ASM226917v1	-	DKU_NT_02
Pediococcus pentosaceus	1255	PRJNA308373	308373	Terrabacteria group	Firmicutes	2.18171	38.1	-	LQNM01	537	2136	1953	1/27/16	4/4/17	Contig	"Institute of Subtropical Agriculture, Chinese Academy of Sciences"	SAMN04395033	GCA_001541865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/865/GCA_001541865.1_ASM154186v1	-	NKYL15
Bacillus subtilis subsp. subtilis	135461	PRJNA389629	389629	Terrabacteria group	Firmicutes	3.98863	43.6	chromosome:NZ_CP021889.1/CP021889.1	-	1	4220	3959	6/20/17	6/22/17	Complete Genome	Microbial Institute for Fermentation Industry	SAMN07204268	GCA_002201955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/955/GCA_002201955.1_ASM220195v1	-	SRCM100761
Bacillus subtilis subsp. subtilis	135461	PRJNA386755	386755	Terrabacteria group	Firmicutes	3.9886	43.6	chromosome:NZ_CP021498.1/CP021498.1	-	1	4221	3949	6/6/17	6/8/17	Complete Genome	Microbial Institiue for Fermentation Industry	SAMN07125937	GCA_002173695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/695/GCA_002173695.1_ASM217369v1	-	SRCM101444
Bacillus subtilis subsp. subtilis	135461	PRJNA386756	386756	Terrabacteria group	Firmicutes	3.98865	43.6	chromosome:NZ_CP021499.1/CP021499.1	-	1	4220	3972	6/6/17	6/8/17	Complete Genome	Microbial Institiue for Fermentation Industry	SAMN07125938	GCA_002173715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/715/GCA_002173715.1_ASM217371v1	-	SRCM100757
Proteiniphilum saccharofermentans	1642647	PRJEB15073	368820	FCB group	Bacteroidetes/Chlorobi group	4.41496	43.6	chromosome I:NZ_LT605205.1/LT605205.1	-	1	3421	3300	1/26/17	4/17/17	Complete Genome	CEBITEC	SAMEA4373296	GCA_900095135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/135/GCA_900095135.1_M36	-	-
Bartonella henselae JK 53	1134508	PRJNA81689	81689	Proteobacteria	Alphaproteobacteria	1.94019	38.3	-	AHPI01	12	1710	1462	6/12/14	4/10/17	Scaffold	Broad Institute	SAMN00778967	GCA_000708545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/545/GCA_000708545.1_Bart_hens_JK_53_V1	-	JK 53
Lactobacillus acidophilus DSM 20079 = JCM 1132 = NBRC 13951	1423717	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.95404	34.6	-	AZCS01	30	1934	1799	11/6/15	4/4/17	Scaffold	Shanghai Majorbio	SAMN02369388	GCA_001433895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/895/GCA_001433895.1_ASM143389v1	26415554	DSM 20079
Clostridium tetani	1513	PRJNA260197	260197	Terrabacteria group	Firmicutes	2.78979	28.6	-	JRGJ01	50	2739	2647	10/2/14	4/2/17	Scaffold	"FDA, Center for Biologics Evaluation and Research"	SAMN03018575	GCA_000762305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/305/GCA_000762305.1_ASM76230v1	-	ATCC 19406
Rhodobacter capsulatus Y262	1415161	PRJNA225630	225630	Proteobacteria	Alphaproteobacteria	3.84436	66.5	-	AYQB01	51	3667	3520	12/11/13	4/4/17	Scaffold	University of British Columbia	SAMN02471354	GCA_000506965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/965/GCA_000506965.2_denovokmer150	24526637	Y262
Bartonella quintana JK 56	1134504	PRJNA81681	81681	Proteobacteria	Alphaproteobacteria	1.58748	38.9	-	AHPE01	4	1394	1213	6/12/14	4/10/17	Scaffold	Broad Institute	SAMN00778963	GCA_000708905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/905/GCA_000708905.1_Bart_quin_JK_56_V1	-	JK 56
Streptococcus uberis 6736	1450192	PRJNA234018	234018	Terrabacteria group	Firmicutes	1.89331	36.4	-	JATB01	27	1901	1825	4/22/15	4/3/17	Contig	University of Nottingham	SAMN02570400	GCA_000975445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/975/445/GCA_000975445.1_ASM97544v1	25898893	6736
Bacteroides thetaiotaomicron	818	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	6.30127	43.1	-	CZBI01	28	5011	4788	10/1/15	4/4/17	Contig	SC	SAMEA3545408	GCA_001406075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/075/GCA_001406075.1_14207_7_68	-	2789STDY5834945
Salmonella bongori	54736	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.42541	51.2	-	MXOE01	58	4329	4047	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356954	GCA_002035475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/475/GCA_002035475.1_ASM203547v1	-	BCW_1555
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.14153	39.9	-	FPIO01	3	1028	931	5/10/17	5/24/17	Contig	WTSI	SAMEA893066	GCA_900118615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/615/GCA_900118615.1_4880_2_7	-	S95/3
Anaplasma phagocytophilum str. Webster	1359162	PRJNA212447	212447	Proteobacteria	Alphaproteobacteria	1.47941	41.6	-	LANS01	1	1181	1061	3/27/15	4/3/17	Contig	IGS	SAMN02666091	GCA_000964685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/685/GCA_000964685.1_ASM96468v1	-	Webster
Bacillus subtilis	1423	PRJNA341310	341310	Terrabacteria group	Firmicutes	4.01042	43.6	chromosome:NZ_CP017314.1/CP017314.1	-	1	4248	3876	9/26/16	3/28/17	Complete Genome	Chonbuk National University	SAMN05717668	GCA_001746575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/575/GCA_001746575.1_ASM174657v1	-	BS38
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.16485	41.5	-	JJPI01	156	3569	3347	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708961	GCA_000978965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/978/965/GCA_000978965.1_gtlEnvA5udCFS	25756680	3.F.T.1A.1
Chlamydia muridarum	83560	PRJNA244653	244653	PVC group	Chlamydiae	1.08045	40.3	-	JNOR01	2	960	908	6/10/14	4/2/17	Contig	IGS	SAMN02808331	GCA_000700845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/845/GCA_000700845.1_cmvar001	24961692	Var001
Bacillus subtilis	1423	PRJNA341308	341308	Terrabacteria group	Firmicutes	4.16512	43.6	chromosome:NZ_CP017112.1/CP017112.1	-	1	4338	4077	9/7/16	3/28/17	Complete Genome	Chonbuk National University	SAMN05717667	GCA_001720505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/505/GCA_001720505.1_ASM172050v1	-	BS16045
Lactobacillus gasseri CECT 5714	1185324	PRJNA163367	163367	Terrabacteria group	Firmicutes	1.90779	35	-	AKFQ01	85	1859	1753	7/30/12	3/30/17	Contig	Era7 Bioinformatics	SAMN02471361	GCA_000283135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/135/GCA_000283135.1_ASM28313v1	-	CECT 5714
Alteromonas stellipolaris	233316	PRJNA319005	319005	Proteobacteria	Gammaproteobacteria	4.75574	43.6	chromosome:NZ_CP015345.1/CP015345.1	-	1	4072	3939	4/27/16	4/12/17	Complete Genome	University of Granada	SAMN04874702	GCA_001632765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/765/GCA_001632765.1_ASM163276v1	-	PQQ-42
Alteromonas stellipolaris	233316	PRJNA319007	319007	Proteobacteria	Gammaproteobacteria	4.72186	43.6	chromosome:NZ_CP015346.1/CP015346.1	-	1	4074	3928	4/27/16	4/12/17	Complete Genome	University of Granada	SAMN04874701	GCA_001632825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/825/GCA_001632825.1_ASM163282v1	-	PQQ-44
Streptococcus gordonii	1302	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.89015	39.5	-	JWCQ01	126	1858	1766	7/10/15	4/3/17	Contig	University of Washington	SAMN03197070	GCA_001070265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/265/GCA_001070265.1_ASM107026v1	26230489	1116_SGOR
Bacillus subtilis	1423	PRJNA316530	316530	Terrabacteria group	Firmicutes	4.1952	43.6	chromosome:NZ_CP015004.1/CP015004.1	-	1	4394	4228	3/31/16	3/28/17	Complete Genome	University of Szeged	SAMN04585399	GCA_001604995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/995/GCA_001604995.1_ASM160499v1	-	SZMC 6179J
Bacillus subtilis subsp. subtilis	135461	PRJNA310397	310397	Terrabacteria group	Firmicutes	4.14264	43.6	chromosome:CP014858.1	-	1	4336	3746	3/23/16	3/23/16	Complete Genome	Chung-Ang University	SAMN04451900	GCA_001596535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/535/GCA_001596535.1_ASM159653v1	-	D12-5
Mesorhizobium loti	381	PRJNA325568	325568	Proteobacteria	Alphaproteobacteria	6.5861	62.9	-	LZTH01	48	6468	6167	6/20/16	4/5/17	Contig	Curtin University	SAMN05240957	GCA_001671475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/671/475/GCA_001671475.1_ASM167147v1	-	R7ANS::ICEMlSym2037
Alteromonas sp. Mac1	1777491	PRJNA307085	307085	Proteobacteria	Gammaproteobacteria	4.69629	43.6	chromosome:NZ_CP013932.1/CP013932.1	-	1	4009	3900	2/17/16	4/11/17	Complete Genome	University Miguel Hernandez	SAMN04390200	GCA_001562125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/125/GCA_001562125.1_ASM156212v1	-	Mac1
Bordetella bronchiseptica OSU054	1331254	PRJNA202197	202197	Proteobacteria	Betaproteobacteria	5.39863	68.1	-	JHBZ01	129	5210	5036	4/29/14	4/2/17	Contig	JCVI	SAMN02231293	GCA_000648965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/965/GCA_000648965.1_gbb58v01	25908122	OSU054
Treponema denticola ATCC 33521	999429	PRJNA64909	64909	Spirochaetes	Spirochaetia	2.76211	38.1	-	AGDT01	3	2622	2470	2/7/13	4/2/17	Scaffold	Broad Institute	SAMN02596719	GCA_000338595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/338/595/GCA_000338595.1_Trep_dent_ATCC_33521_V1	-	ATCC 33521
Bacteroides uniformis	820	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	4.89327	46.2	-	CYZF01	26	4083	3898	10/1/15	4/4/17	Contig	SC	SAMEA2393087	GCA_001405475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/475/GCA_001405475.1_12718_7_90	-	2789STDY5608791
Bacteroides ovatus str. 3725 D1 iv	1339346	PRJNA206123	206123	FCB group	Bacteroidetes/Chlorobi group	7.03045	42.2	-	JNHF01	181	5835	5491	6/9/14	4/2/17	Contig	IGS	SAMN02370950	GCA_000699725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/725/GCA_000699725.1_ASM69972v1	-	3725 D1 iv
Providencia stuartii	588	PRJNA357711	357711	Proteobacteria	Gammaproteobacteria	4.41104	41.8	-	MSAA01	79	4148	3921	1/23/17	4/6/17	Contig	CVI of Wageningen University	SAMN06159664	GCA_001968995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/968/995/GCA_001968995.1_ASM196899v1	-	PS71
Dorea longicatena	88431	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.18178	41.9	-	DGTV01	224	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453633	GCA_002394425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/425/GCA_002394425.1_ASM239442v1	28894102	-
Alteromonas addita	287094	PRJNA307085	307085	Proteobacteria	Gammaproteobacteria	4.64915	43.6	chromosome:NZ_CP014322.1/CP014322.1	-	1	4004	3877	2/17/16	4/16/17	Complete Genome	University Miguel Hernandez	SAMN04372247	GCA_001562195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/195/GCA_001562195.1_ASM156219v1	-	R10SW13
Clostridium sporogenes	1509	PRJNA266242	266242	Terrabacteria group	Firmicutes	3.98288	28.1	-	LAGH01	338	3935	2165	3/27/15	4/3/17	Contig	Centers for Disease Control and Prevention	SAMN03169469	GCA_000965335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/335/GCA_000965335.1_ASM96533v1	-	CDC24533
Bacillus megaterium NCT-2	1138452	PRJNA82241	82241	Terrabacteria group	Firmicutes	5.32378	37.8	-	AHTF01	149	5437	5264	1/31/13	6/15/17	Contig	Shanghai Jiaotong University	SAMN02470967	GCA_000334875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/875/GCA_000334875.1_ASM33487v1	24122235	NCT-2
Enterococcus gallinarum	1353	PRJNA313452	313452	Terrabacteria group	Firmicutes	3.39993	40.5	-	NGMQ01	7	3347	3130	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634024	GCA_002140495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/495/GCA_002140495.1_ASM214049v1	-	2A8_DIV0586
Enterococcus casseliflavus	37734	PRJNA368999	368999	Terrabacteria group	Firmicutes	3.72505	41.9	-	MUBE01	70	3620	3355	2/15/17	4/6/17	Contig	"Center for Genomic Sciences, UNAM"	SAMN06275556	GCA_002000325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/325/GCA_002000325.1_ASM200032v1	-	PAVET15
Alteromonas sp. Mac2	1777492	PRJNA307085	307085	Proteobacteria	Gammaproteobacteria	4.66636	43.6	chromosome:CP013933.1	-	1	3930	3849	2/17/16	2/17/16	Complete Genome	University Miguel Hernandez	SAMN04390237	GCA_001562155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/155/GCA_001562155.1_ASM156215v1	-	Mac2
Vibrio splendidus	29497	PRJNA302718	302718	Proteobacteria	Gammaproteobacteria	5.74491	43.9	-	LNQX01	85	5145	4904	2/10/16	4/4/17	Contig	University of Cambridge	SAMN04279321	GCA_001558015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/015/GCA_001558015.1_ASM155801v1	-	NCCB 53037
Alteromonas stellipolaris LMG 21856	1160720	PRJNA296407	296407	Proteobacteria	Gammaproteobacteria	4.6862	43.6	chromosome:NZ_CP013120.1/CP013120.1	-	1	4007	3887	11/6/15	4/11/17	Complete Genome	Zhejiang Wanli University	SAMN04098991	GCA_001433715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/715/GCA_001433715.1_ASM143371v1	27013039	LMG 21856
Bacillus subtilis subsp. subtilis	135461	PRJNA270310	270310	Terrabacteria group	Firmicutes	4.1951	43.6	chromosome:NZ_CP010314.1/CP010314.1	-	1	4395	4226	1/21/15	3/25/17	Complete Genome	University of Goettingen	SAMN03265456	GCA_000827065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/827/065/GCA_000827065.1_ASM82706v1	25767229	3NA
Bacillus subtilis QB928	1220533	PRJNA172244	172244	Terrabacteria group	Firmicutes	4.14684	43.6	chromosome:NC_018520.1/CP003783.1	-	1	4332	4156	8/28/12	6/15/17	Complete Genome	The Chinese University of Hong Kong	SAMN02603911	GCA_000293765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/765/GCA_000293765.1_ASM29376v1	23105055	QB928
Haemophilus parasuis MN-H	1275967	PRJNA184680	184680	Proteobacteria	Gammaproteobacteria	1.76109	39.7	-	APBV01	82	1796	1566	8/7/13	4/1/17	Contig	Iowa State University	SAMN02470070	GCA_000444585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/585/GCA_000444585.1_ASM44458v1	24051319	MN-H
Zymomonas mobilis subsp. mobilis ATCC 31822	1231376	PRJNA174829	174829	Proteobacteria	Alphaproteobacteria	2.03907	46.2	-	AMSR01	26	1810	1734	10/4/12	3/30/17	Scaffold	"Dalian University of Technology, China"	SAMN02469699	GCA_000303025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/025/GCA_000303025.1_ASM30302v1	23209250	ATCC 31822
Helicobacter pullorum	35818	PRJNA326716	326716	Proteobacteria	delta/epsilon subdivisions	1.73393	34.4	-	MAPD01	74	1708	1618	8/4/16	4/5/17	Contig	University of Hyderabad	SAMN05291442	GCA_001698705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/705/GCA_001698705.1_ASM169870v1	-	NAP3W17
Streptococcus equi subsp. zooepidemicus Sz16	1381085	PRJNA214018	214018	Terrabacteria group	Firmicutes	2.13936	41.3	-	JATW01	100	2021	1912	2/17/15	3/25/17	Contig	Copenhagen University	SAMN02298718	GCA_000876295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/295/GCA_000876295.1_ASM87629v1	-	Sz16
Micrococcus luteus	1270	PRJNA305084	305084	Terrabacteria group	Actinobacteria	2.49751	73	-	LQAC01	84	2368	2189	2/1/16	4/4/17	Contig	Griffith University	SAMN04356940	GCA_001543375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/375/GCA_001543375.1_ASM154337v1	-	NDB3Y10
Alteromonas macleodii	28108	PRJNA338983	338983	Proteobacteria	Gammaproteobacteria	5.24365	44.6	-	MIPX01	71	4707	4554	9/30/16	4/5/17	Contig	US Naval Research Lab	SAMN05578453	GCA_001750295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/295/GCA_001750295.1_ASM175029v1	-	KCC01
Bifidobacterium bifidum LMG 13195	1207542	PRJNA170146	170146	Terrabacteria group	Actinobacteria	2.28315	62.6	-	AMPL01	164	1961	1742	9/27/12	3/30/17	Contig	IPLA-CSIC	SAMN02470080	GCA_000299595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/595/GCA_000299595.1_ASM29959v1	23209243	LMG 13195
Yersinia kristensenii	28152	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.63173	47.4	-	CPYI01	37	4311	4112	3/22/15	4/3/17	Scaffold	SC	SAMEA859960	GCA_001134585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/585/GCA_001134585.1_4821_5_7	-	FCF326
Yersinia frederiksenii	29484	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	5.19092	47.6	-	CQBF01	61	4866	4630	3/23/15	4/3/17	Scaffold	SC	SAMEA859876	GCA_001121225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/225/GCA_001121225.1_4821_8_11	-	IP25924
Bacillus mycoides	1405	PRJNA272997	272997	Terrabacteria group	Firmicutes	5.7854	35.2	-	JYFS01	106	6020	5549	2/23/15	4/3/17	Contig	UFRGS	SAMN03288106	GCA_000931375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/375/GCA_000931375.1_ASM93137v1	25838494	B38V
Comamonas testosteroni	285	PRJNA217849	217849	Proteobacteria	Betaproteobacteria	5.95252	61.1	-	AWOR01	129	5537	5285	10/1/14	4/2/17	Contig	Huazhong Agricultural University	SAMN02768805	GCA_000761245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/245/GCA_000761245.1_CJL40v1	-	JL40
Moraxella osloensis	34062	PRJNA282954	282954	Proteobacteria	Gammaproteobacteria	2.64914	43.5846	chromosome:NZ_CP014234.1/CP014234.1; plasmid unnamed1:NZ_CP014238.1/CP014238.1; plasmid unnamed2:NZ_CP014237.1/CP014237.1; plasmid unnamed3:NZ_CP014236.1/CP014236.1; plasmid unnamed4:NZ_CP014235.1/CP014235.1	-	5	2379	2246	2/9/16	4/11/17	Complete Genome	The Forsyth Institute	SAMN04435858	GCA_001553955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/955/GCA_001553955.1_ASM155395v1	-	CCUG 350
Rhizobium etli GR56	526947	PRJNA29561	29561	Proteobacteria	Alphaproteobacteria	4.16418	61.5	-	ABRB01	2309	-	-	6/17/08	1/8/14	Contig	"Centro de Ciencias Genomicas, Universidad Nacional Autonoma de Mexico"	SAMN02469454	GCA_000172755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/755/GCA_000172755.1_ASM17275v1	-	GR56
Bacillus subtilis	1423	PRJNA381127	381127	Terrabacteria group	Firmicutes	4.14259	43.5	chromosome:NZ_CP020722.1/CP020722.1	-	1	4399	4038	4/18/17	4/21/17	Complete Genome	Harbin University of Commerce	SAMN06670765	GCA_002096095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/095/GCA_002096095.1_ASM209609v1	-	Bs-115
Bacillus subtilis	1423	PRJNA338086	338086	Terrabacteria group	Firmicutes	4.23512	43.5	chromosome:NZ_CP016894.1/CP016894.1	-	1	4422	4201	8/12/16	3/28/17	Complete Genome	National Academy of Agrigultural Science	SAMN05520947	GCA_001704095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/095/GCA_001704095.1_ASM170409v1	-	HJ0-6
Bacillus subtilis subsp. subtilis	135461	PRJNA268543	268543	Terrabacteria group	Firmicutes	4.21481	43.5	chromosome:NZ_CP016852.1/CP016852.1	-	1	4419	4250	8/11/16	3/28/17	Complete Genome	Medical University of Gdansk	SAMN05526243	GCA_001703495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/703/495/GCA_001703495.1_ASM170349v1	-	168G
Bacillus subtilis subsp. subtilis	135461	PRJNA302835	302835	Terrabacteria group	Firmicutes	4.21134	43.5	chromosome:NZ_CP015375.1/CP015375.1	-	1	4426	4263	8/2/16	3/28/17	Complete Genome	Korea Research Institute of Standards and Science (KRISS)	SAMN04281244	GCA_001697265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/265/GCA_001697265.1_ASM169726v1	-	KCTC 3135
Bacillus subtilis KCTC 1028	1136873	PRJNA81651	81651	Terrabacteria group	Firmicutes	4.21563	43.5	chromosome:NZ_CP011115.1/CP011115.1	-	1	4418	4252	4/15/15	3/26/17	Complete Genome	KRIBB	SAMN03394574	GCA_000971925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/925/GCA_000971925.1_ASM97192v1	25999562	KCTC 1028
Streptococcus mutans TCI-11	1074095	PRJNA71953	71953	Terrabacteria group	Firmicutes	1.79992	37	-	AGKH01	141	1826	1708	10/6/11	3/22/17	Contig	JCVI	SAMN02436346	GCA_000228785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/785/GCA_000228785.2_SMUT3-NEX_4-11	-	TCI-11
Borrelia garinii IPT104	1408838	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.2107	27.8	-	AYAN01	191	1220	692	12/3/13	4/2/17	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378805	GCA_000501135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/135/GCA_000501135.1_BorGarIPT104	-	IPT104
Streptococcus dysgalactiae subsp. equisimilis	119602	PRJNA279308	279308	Terrabacteria group	Firmicutes	2.01559	39.5	-	LAKS01	86	1997	1717	4/8/15	4/11/17	Contig	MD Anderson	SAMN03445738	GCA_000970975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/975/GCA_000970975.1_ASM97097v1	26430051	UT-SS1069
Bifidobacterium dentium	1689	PRJNA272371	272371	Terrabacteria group	Actinobacteria	1.40795	58.4	-	LSUJ01	10	1154	1096	2/29/16	2/29/16	Contig	National University of Singapore	SAMN04497915	GCA_001576945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/945/GCA_001576945.1_ASM157694v1	-	-
Methanobrevibacter smithii TS147A	911123	PRJNA59663	59663	Euryarchaeota	Methanobacteria	2.00898	30.5	-	AELR01	61	1964	1828	2/17/11	3/30/17	Contig	Washington University in St.Louis	SAMN02436667	GCA_000189935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/935/GCA_000189935.2_ASM18993v2	21317366	TS147A
Microcystis aeruginosa PCC 9808	1160284	PRJEA88181	88181	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.05105	42.4	-	CAIN01	141	5090	4556	5/28/12	3/31/17	Scaffold	Genoscope CEA	SAMEA2272072	GCA_000312245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/245/GCA_000312245.1_ASM31224v1	-	PCC 9808
Bradyrhizobium japonicum USDA 6	1037409	PRJNA163001	163001	Proteobacteria	Alphaproteobacteria	9.13114	63.7	-	AXAV01	87	8715	8321	9/30/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02441114	GCA_000472985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/985/GCA_000472985.1_ASM47298v1	-	USDA 6
Bacillus subtilis subsp. subtilis str. 168	224308	PRJNA268543	268543	Terrabacteria group	Firmicutes	4.21562	43.5	chromosome:NZ_CP010052.1/CP010052.1	-	1	4419	4255	12/4/14	3/25/17	Complete Genome	Medical University of Gdansk	SAMN03222589	GCA_000789275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/275/GCA_000789275.1_ASM78927v1	-	168
Bacillus subtilis	1423	PRJNA268543	268543	Terrabacteria group	Firmicutes	4.21537	43.5	chromosome:NZ_CP010053.1/CP010053.1	-	1	4418	4248	12/4/14	3/25/17	Complete Genome	Medical University of Gdansk	SAMN03222590	GCA_000789295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/295/GCA_000789295.1_ASM78929v1	-	PS832
Brucella canis CNGB 513	1198685	PRJNA176525	176525	Proteobacteria	Alphaproteobacteria	3.31403	57.2	-	AQJZ01	6	3363	3157	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN01047736	GCA_000370605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/605/GCA_000370605.1_Bruc_cani_CNGB_513_V1	-	CNGB 513
Clavibacter michiganensis subsp. nebraskensis	31963	PRJNA305661	305661	Terrabacteria group	Actinobacteria	3.07735	72.9	-	LSOE01	25	2932	2796	5/13/16	4/5/17	Contig	Eastern Cereal and Oilseed Research Centre	SAMN04488295	GCA_001643055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/055/GCA_001643055.1_ASM164305v1	-	DOAB 395
Bacillus sp.	1409	PRJEB7328	267825	Terrabacteria group	Firmicutes	4.23362	43.5	chromosome I:NZ_LN680001.1/LN680001.1	-	1	4440	4272	11/20/14	4/10/17	Complete Genome	LEIDEN UNIVERSITY MEDICAL CENTER	SAMEA2247639	GCA_000952895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/895/GCA_000952895.1_BS34ACh	-	BS34A
Ochrobactrum anthropi	529	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	4.91087	55.9	-	DGLG01	50	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457832	GCA_002387885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/885/GCA_002387885.1_ASM238788v1	28894102	-
Rhizobium leguminosarum bv. trifolii WSM597	754764	PRJNA65299	65299	Proteobacteria	Alphaproteobacteria	7.63438	61	-	AKHZ01	2	7458	7051	6/5/12	7/9/17	Scaffold	JGI	SAMN02261418	GCA_000271785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/785/GCA_000271785.1_ASM27178v1	-	WSM597
Treponema pallidum subsp. pallidum SS14	455434	PRJNA20067	20067	Spirochaetes	Spirochaetia	1.13957	52.8	chromosome:NC_021508.1/CP004011.1	-	1	1066	1002	6/11/13	4/1/17	Chromosome	Baylor College of Medicine	SAMN00000318	GCA_000410555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/555/GCA_000410555.1_ASM41055v1	24058545	SS14
Borrelia burgdorferi 156a	445983	PRJNA19835	19835	Spirochaetes	Spirochaetia	1.46983	28.097	plasmid 156a_cp26:NC_011853.1/CP001271.1; plasmid 156a_cp32-1:NC_011846.1/CP001261.1; plasmid 156a_cp32-11:NC_011850.1/CP001270.1; plasmid 156a_cp32-12:NC_011841.1/CP001266.1; plasmid 156a_cp32-3:NC_011851.1/CP001264.1; plasmid 156a_cp32-4:NC_011849.1/CP001263.1; plasmid 156a_cp32-6:NC_011843.1/CP001259.1; plasmid 156a_cp32-7:NC_011845.1/CP001268.1; plasmid 156a_cp32-8:NC_011847.1/CP001269.1; plasmid 156a_lp17:NC_011865.1/CP001258.1; plasmid 156a_lp25:NC_011863.1/CP001265.1; plasmid 156a_lp28-1:NC_011864.1/CP001273.1; plasmid 156a_lp28-3:NC_011874.1/CP001256.1; plasmid 156a_lp28-4:NC_011862.1/CP001272.1; plasmid 156a_lp28-5:NC_011866.1/CP001274.1; plasmid 156a_lp28-6:NC_011872.1/CP001262.1; plasmid 156a_lp36:NC_011870.1/CP001260.1; plasmid 156a_lp38:NC_011868.1/CP001267.1; plasmid 156a_lp54:NC_011876.1/CP001257.1	ABCV02	32	1505	1396	6/26/07	3/30/17	Scaffold	J. Craig Venter Institute	SAMN02436325	GCA_000181555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/181/555/GCA_000181555.2_ASM18155v2	-	156a
Burkholderia multivorans CGD2M	513053	PRJNA30745	30745	Proteobacteria	Betaproteobacteria	6.56437	67	-	ACFD01	27	6316	6100	1/22/09	7/9/17	Contig	The J. Craig Venter Institute	SAMN00000359	GCA_000182295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/182/295/GCA_000182295.1_JCVI-gbv2-v1.0	-	CGD2M
Bacillus subtilis	1423	PRJEB7327	267824	Terrabacteria group	Firmicutes	4.25165	43.5	chromosome I:NZ_LN649259.1/LN649259.1	-	1	4460	4291	11/19/14	3/25/17	Complete Genome	LEIDEN UNIVERSITY MEDICAL CENTER	SAMEA2780588	GCA_000953615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/615/GCA_000953615.1_BS49Ch	-	BS49
Bacillus subtilis subsp. subtilis str. JH642 substr. AG174	1232554	PRJNA172410	172410	Terrabacteria group	Firmicutes	4.18837	43.5	chromosome:NZ_CP007800.1/CP007800.1	-	1	4405	4238	6/9/14	3/24/17	Complete Genome	MIT	SAMN02800681	GCA_000699465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/465/GCA_000699465.1_ASM69946v1	24994804	JH642 substr. AG174
Aliivibrio fischeri	668	PRJNA311605	311605	Proteobacteria	Gammaproteobacteria	4.3678	38.2	-	LTZB01	72	4049	3899	5/9/16	4/5/17	Contig	MIT	SAMN04519657	GCA_001640445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/445/GCA_001640445.1_ASM164044v1	27128997	MB13B2
Bacillus subtilis subsp. subtilis str. AG1839	1221328	PRJNA172448	172448	Terrabacteria group	Firmicutes	4.19364	43.5	chromosome:NZ_CP008698.1/CP008698.1	-	1	4410	4240	6/9/14	3/24/17	Complete Genome	MIT	SAMN02841094	GCA_000699525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/525/GCA_000699525.1_ASM69952v1	24994804	AG1839
Ureaplasma urealyticum serovar 2 str. ATCC 27814	626096	PRJNA20687	20687	Terrabacteria group	Tenericutes	0.870038	25.9	-	ABFL02	9	688	620	9/7/07	3/30/17	Contig	J. Craig Venter Institute	SAMN02436279	GCA_000171555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/555/GCA_000171555.1_ASM17155v1	-	ATCC 27814
Ureaplasma parvum serovar 1 str. ATCC 27813	515608	PRJNA20245	20245	Terrabacteria group	Tenericutes	0.753674	25.4	-	ABES01	12	634	573	8/8/07	4/7/17	Contig	J. Craig Venter Institute	SAMN02436169	GCA_000171375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/375/GCA_000171375.1_ASM17137v1	-	ATCC 27813
Porphyromonas gingivalis F0570	1227271	PRJNA173939	173939	FCB group	Bacteroidetes/Chlorobi group	2.28279	48.5	-	AWUW01	117	2027	1876	9/16/13	4/1/17	Scaffold	Washington University	SAMN02436747	GCA_000467835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/835/GCA_000467835.1_ASM46783v1	-	F0570
Candidatus Moranella endobia PCVAL	1234603	PRJNA175680	175680	Proteobacteria	Gammaproteobacteria	0.538203	43.5	chromosome:NC_021057.1/CP003881.1	-	1	480	411	4/15/13	4/8/17	Complete Genome	ICBiBE (University of Valencia)	SAMN02603332	GCA_000364725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/725/GCA_000364725.1_ASM36472v1	23548081	PCVAL
Lactobacillus fermentum	1613	PRJNA347617	347617	Terrabacteria group	Firmicutes	2.09869	52.2	chromosome:NZ_CP017712.1/CP017712.1	-	1	1853	1636	10/26/16	4/5/17	Chromosome	Khon Kaen University	SAMN05893390	GCA_001854105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/105/GCA_001854105.1_ASM185410v1	-	47-7
Orientia tsutsugamushi	784	PRJNA322207	322207	Proteobacteria	Alphaproteobacteria	1.29532	29.9	-	LYMT01	452	1167	878	6/2/16	4/5/17	Contig	"Center for Biologics Evaluation and Research, Food and Drug Administration"	SAMN05075746	GCA_001654795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/654/795/GCA_001654795.1_ASM165479v1	-	AFSC4
Sulfolobus islandicus L.D.8.5	425944	PRJNA18803	18803	TACK group	Crenarchaeota	2.74865	35.3077	chromosome:NC_013769.1/CP001731.1; plasmid pLD8501:NC_013770.1/CP001732.1	-	2	3039	2765	1/22/10	3/30/17	Chromosome	US DOE Joint Genome Institute	SAMN02598413	GCA_000024305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/305/GCA_000024305.1_ASM2430v1	-	L.D.8.5
Lactococcus garvieae IPLA 31405	1181234	PRJNA161657	161657	Terrabacteria group	Firmicutes	2.05231	38.5	-	AKFO01	23	2066	1961	6/17/12	3/30/17	Contig	Era7 Bioinformatics	SAMN02470077	GCA_000269705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/705/GCA_000269705.1_ASM26970v1	22933752	IPLA 31405
Bifidobacterium adolescentis	1680	PRJEB10915	297013	Terrabacteria group	Actinobacteria	2.31205	59.4	-	CYYI01	15	1993	1862	10/1/15	4/4/17	Contig	SC	SAMEA3545233	GCA_001406455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/455/GCA_001406455.1_13414_6_8	-	2789STDY5608824
Vibrio harveyi NBRC 15634 = ATCC 14126	1219071	PRJDB726	203003	Proteobacteria	Gammaproteobacteria	5.67	44.9	-	BAOD01	245	5307	5109	5/14/13	4/1/17	Contig	University of Miyazaki	SAMD00036657	GCA_000400305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/305/GCA_000400305.1_ASM40030v1	23710045	NBRC 15634 = ATCC 14126
Faecalibacterium prausnitzii	853	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.91473	59.7	-	MNSQ01	163	1822	1459	12/23/16	12/23/16	Scaffold	None	SAMN05717274	GCA_001916545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/545/GCA_001916545.1_ASM191654v1	27819664	-
Borrelia afzelii IPT110	1408884	PRJNA223339	223339	Spirochaetes	Spirochaetia	0.912442	28.2	-	AYCH01	731	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378851	GCA_000502175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/175/GCA_000502175.1_BorAfzIPT110	-	IPT110
Photobacterium damselae subsp. damselae CIP 102761	675817	PRJNA40485	40485	Proteobacteria	Gammaproteobacteria	5.04633	40.7	-	ADBS01	8	4650	4284	11/13/09	5/19/17	Scaffold	"Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR)"	SAMN02393816	GCA_000176795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/795/GCA_000176795.1_ASM17679v1	-	CIP 102761
Bacillus subtilis subsp. subtilis 6051-HGW	1147161	PRJNA82795	82795	Terrabacteria group	Firmicutes	4.21561	43.5	chromosome:NC_020507.1/CP003329.1	-	1	4422	4257	3/6/13	5/18/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02603273	GCA_000344745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/745/GCA_000344745.1_ASM34474v1	22789474	6051-HGW
Geobacillus stearothermophilus	1422	PRJNA314192	314192	Terrabacteria group	Firmicutes	2.70094	52.5	-	LUCR01	224	2929	2569	5/25/16	4/5/17	Scaffold	NIZO food research	SAMN04532070	GCA_001651555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/555/GCA_001651555.1_ASM165155v1	-	GS27
Ralstonia pickettii	329	PRJNA238509	238509	Proteobacteria	Betaproteobacteria	5.74654	63.3	-	JFZG01	38	5465	5303	3/28/14	4/2/17	Scaffold	Belgian Nuclear Research Center	SAMN02644835	GCA_000607165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/165/GCA_000607165.1_assembly_v1_of_Ralstonia_pickettii_SSH4	25189592	SSH4
Lactobacillus ruminis ATCC 27782	1069534	PRJNA70721	70721	Terrabacteria group	Firmicutes	2.06665	43.5	chromosome:NC_015975.1/CP003032.1	-	1	2136	1862	9/1/11	4/10/17	Complete Genome	"Microbiology Dept, University College Cork"	SAMN02603606	GCA_000224985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/985/GCA_000224985.1_ASM22498v1	21995554	ATCC 27782
Salinispora arenicola CNY011	1169162	PRJNA175177	175177	Terrabacteria group	Actinobacteria	5.72213	69.4	-	ARHD01	82	5161	4802	4/19/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441008	GCA_000375125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/125/GCA_000375125.1_ASM37512v1	-	CNY011
Lactobacillus casei LcY	1321951	PRJNA196992	196992	Terrabacteria group	Firmicutes	3.10237	46.3481	chromosome:NZ_CM001848.2/CM001848.2; plasmid pYAK:NZ_CM002348.1/CM002348.1	ARNV02	2	3260	3028	5/2/13	4/2/17	Chromosome	University of Helsinki	SAMN02046319	GCA_000388095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/095/GCA_000388095.2_LcY_assembly050913	23815335	LcY
Candidatus Moranella endobia PCIT	903503	PRJNA53213	53213	Proteobacteria	Gammaproteobacteria	0.538294	43.5	chromosome:NC_015735.1/CP002243.1	-	1	480	412	6/24/11	4/7/17	Complete Genome	University of Montana	SAMN02604229	GCA_000219175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/175/GCA_000219175.1_ASM21917v1	21835622	PCIT
Alteromonas naphthalenivorans	715451	PRJNA59947	59947	Proteobacteria	Gammaproteobacteria	4.97215	43.5	chromosome:NC_015554.1/CP002339.1	-	1	4373	4202	5/13/11	4/17/17	Complete Genome	Chung-ang University	SAMN02603134	GCA_000213655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/655/GCA_000213655.1_ASM21365v1	21705606	SN2
Mahella australiensis 50-1 BON	697281	PRJNA42243	42243	Terrabacteria group	Firmicutes	3.13597	43.5	chromosome:NC_015520.1/CP002360.1	-	1	2978	2881	5/12/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02232034	GCA_000213255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/255/GCA_000213255.1_ASM21325v1	21886860	50-1 BON
Salinispora tropica CNT250	1169196	PRJNA195720	195720	Terrabacteria group	Actinobacteria	5.17021	69.4	-	JHVW01	59	4815	4505	4/8/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02953002	GCA_000620345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/345/GCA_000620345.1_ASM62034v1	-	CNT250
Aeromonas salmonicida subsp. salmonicida	29491	PRJNA264317	264317	Proteobacteria	Gammaproteobacteria	4.73037	58.4816	plasmid pAsa1:NZ_CM004287.1/CM004287.1; plasmid pAsa2:NZ_CM004288.1/CM004288.1; plasmid pAsa3:NZ_CM004289.1/CM004289.1; plasmid pAsa7:NZ_KU499859.1/KU499859.1	JYFG01	111	4531	4060	3/25/16	4/5/17	Scaffold	Universite Laval	SAMN03332968	GCA_001597895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/895/GCA_001597895.1_ASM159789v1	-	JF3791
Streptococcus mitis NCTC 12261	246201	PRJNA173	173	Terrabacteria group	Firmicutes	1.83108	40.5	-	AEDX01	24	1861	1647	9/24/10	4/6/17	Contig	TIGR	SAMN02435817	GCA_000148585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/585/GCA_000148585.2_ASM14858v1	-	NCTC 12261
Oenococcus oeni AWRIB553	1206773	PRJNA169942	169942	Terrabacteria group	Firmicutes	1.75911	37.8	-	ALAI01	32	1785	1633	8/9/12	3/23/17	Contig	The Australian Wine Research Institute	SAMN02471117	GCA_000286215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/215/GCA_000286215.1_AWRIB553_v1	22863143	AWRIB553
Bacillus subtilis subsp. subtilis str. 168	224308	PRJNA76	76	Terrabacteria group	Firmicutes	4.21561	43.5	chromosome:NC_000964.3/AL009126.3	-	1	4420	4174	11/20/97	5/21/17	Complete Genome	BSNR	SAMEA3138188	GCA_000009045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/045/GCA_000009045.1_ASM904v1	"8,969,508,938,437,710,000,000"	168
Moorea producens PAL-8-15-08-1	1458985	PRJNA345358	345358	Terrabacteria group	Cyanobacteria/Melainabacteria group	9.70866	43.4974	chromosome:NZ_CP017599.1/CP017599.1; plasmid unnamed:NZ_CP017600.1/CP017600.1	-	2	7445	6792	10/18/16	4/13/17	Complete Genome	UCSD	SAMN05826283	GCA_001767235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/235/GCA_001767235.1_ASM176723v1	-	PAL-8-15-08-1
Bacillus subtilis subsp. natto BEST195	645657	PRJDA38027	38027	Terrabacteria group	Firmicutes	4.11122	43.4962	chromosome:NC_017196.2/AP011541.2; plasmid pBEST195S:NC_017194.1/AP011542.1	-	2	4366	4024	3/25/10	3/24/17	Complete Genome	Keio University	SAMD00016353	GCA_000209795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/209/795/GCA_000209795.2_ASM20979v2	"2,039,835,725,329,990"	BEST195
Bartonella bacilliformis Peru38	1293905	PRJNA189514	189514	Proteobacteria	Alphaproteobacteria	1.42178	38.3	-	ASIW01	7	1262	1166	6/17/14	4/3/17	Scaffold	Broad Institute	SAMN01921138	GCA_000709815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/815/GCA_000709815.1_Bart_baci_Peru38_V1	-	Peru38
Mycoplasma capricolum subsp. capricolum	40479	PRJNA241088	241088	Terrabacteria group	Tenericutes	1.02445	23.8	-	JXQB01	1	880	802	1/30/15	4/3/17	Contig	University of Missouri - Columbia	SAMN03283040	GCA_000830335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/335/GCA_000830335.1_ASM83033v1	-	GM508D
Leptospira borgpetersenii str. Brem 307	1049786	PRJNA74065	74065	Spirochaetes	Spirochaetia	3.82982	40.2	-	AHMR02	140	3957	3331	1/24/12	4/1/17	Contig	J. Craig Venter Institute	SAMN02436370	GCA_000243775.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/775/GCA_000243775.3_gls454055v02	-	Brem 307
Alteromonas stellipolaris	233316	PRJNA307085	307085	Proteobacteria	Gammaproteobacteria	4.90419	43.4869	chromosome:NZ_CP013926.1/CP013926.1; plasmid pASTE61-200:NZ_CP013927.1/CP013927.1	-	2	4217	4100	2/17/16	4/11/17	Complete Genome	University Miguel Hernandez	SAMN04372255	GCA_001562115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/115/GCA_001562115.1_ASM156211v1	-	LMG 21861
Prevotella intermedia 17	246198	PRJNA175	175	FCB group	Bacteroidetes/Chlorobi group	2.69944	43.465	chromosome I:NC_017860.1/CP003502.1; chromosome II:NC_017861.1/CP003503.1	-	2	2414	2245	5/4/12	3/30/17	Complete Genome	TIGR	SAMN02603988	GCA_000261025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/025/GCA_000261025.1_ASM26102v1	-	17
Lactobacillus parabuchneri	152331	PRJNA357007	357007	Terrabacteria group	Firmicutes	2.72658	43.4635	chromosome:NZ_CP018796.1/CP018796.1; plasmid pFAM21731.1:NZ_CP018797.1/CP018797.1; plasmid pFAM21731.2:NZ_CP018798.1/CP018798.1	-	3	2608	2420	12/27/16	4/6/17	Complete Genome	University of Bern	SAMN06130972	GCA_001922025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/025/GCA_001922025.1_ASM192202v1	-	FAM21731
Prevotella intermedia ATCC 25611 = DSM 20706	1122984	PRJNA313956	313956	FCB group	Bacteroidetes/Chlorobi group	2.67417	43.4621	chromosome I:NZ_CP019300.1/CP019300.1; chromosome II:NZ_CP019301.1/CP019301.1	-	2	2355	2188	1/18/17	4/6/17	Complete Genome	The Forsyth Institute	SAMN04529094	GCA_001953955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/955/GCA_001953955.1_ASM195395v1	-	ATCC 25611
Rhodopseudomonas palustris	1076	PRJNA283573	283573	Proteobacteria	Alphaproteobacteria	5.12529	65.7	-	LCZM01	308	4775	4602	6/5/15	4/3/17	Contig	University of Florence	SAMN03647066	GCA_001020905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/905/GCA_001020905.1_ASM102090v1	-	42OL
Streptococcus salivarius	1304	PRJNA272111	272111	Terrabacteria group	Firmicutes	2.10359	39.8	-	LRQS02	78	2014	1882	2/2/16	4/5/17	Scaffold	The Genome Institute at Washington University	SAMN03956211	GCA_001546835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/835/GCA_001546835.2_ASM154683v2	-	GED7778A
Shigella boydii 08-2671	1212574	PRJNA171081	171081	Proteobacteria	Gammaproteobacteria	4.81788	50.9	-	AMKB01	185	5298	4369	1/6/15	8/4/17	Contig	Institute for Genome Sciences	SAMN03276484	GCA_000815725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/725/GCA_000815725.1_ASM81572v1	-	Aug-71
Pseudoalteromonas piscicida	43662	PRJNA374735	374735	Proteobacteria	Gammaproteobacteria	5.31705	43.4435	chromosome 1:NZ_CP021646.1/CP021646.1; chromosome 2:NZ_CP021647.1/CP021647.1	-	2	4721	4258	6/26/17	6/28/17	Complete Genome	USDA-Agricultural Research Service-Eastern Regional Research Center	SAMN06333962	GCA_002208135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/135/GCA_002208135.1_ASM220813v1	-	DE2-B
Prevotella intermedia	28131	PRJNA313956	313956	FCB group	Bacteroidetes/Chlorobi group	2.73631	43.438	chromosome I:NZ_CP019302.1/CP019302.1; chromosome II:NZ_CP019303.1/CP019303.1	-	2	2451	2278	1/18/17	4/6/17	Complete Genome	The Forsyth Institute	SAMN04529095	GCA_001953935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/935/GCA_001953935.1_ASM195393v1	-	strain 17
Candidatus Pelagibacter ubique HTCC7217	1400525	PRJNA219144	219144	Proteobacteria	Alphaproteobacteria	1.43361	28.8	-	JNIU01	1	1515	1473	6/11/14	4/2/17	Contig	DOE Joint Genome Institute	SAMN02841150	GCA_000702645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/645/GCA_000702645.1_ASM70264v1	-	HTCC7217
Corynebacterium jeikeium	38289	PRJNA238244	238244	Terrabacteria group	Actinobacteria	2.30251	61.9	-	JFCQ01	30	2030	1908	8/6/14	4/2/17	Contig	University of Washington	SAMN02641056	GCA_000738265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/265/GCA_000738265.1_Cj37130	25116839	Cj37130
Prevotella intermedia	28131	PRJDB4034	289862	FCB group	Bacteroidetes/Chlorobi group	2.73727	43.4322	chromosome 1:NZ_AP014926.1/AP014926.1; chromosome 2:NZ_AP014925.1/AP014925.1	-	2	2453	2276	7/7/15	4/4/17	Complete Genome	osaka dental university	SAMD00034934	GCA_001548195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/195/GCA_001548195.1_ASM154819v1	26294638	17-2
Bacillus subtilis subsp. natto	86029	PRJNA309599	309599	Terrabacteria group	Firmicutes	4.19375	43.407	chromosome:NZ_CP014471.1/CP014471.1; plasmid unnamed1:NZ_CP014472.1/CP014472.1; plasmid unnamed2:NZ_CP014473.1/CP014473.1	-	3	4476	4128	2/22/16	4/10/17	Complete Genome	Shaanxi Normal University	SAMN04437026	GCA_001565875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/875/GCA_001565875.1_ASM156587v1	-	CGMCC 2108
Bacillus subtilis	1423	PRJNA355020	355020	Terrabacteria group	Firmicutes	4.21243	43.4049	chromosome:NZ_CP018184.1/CP018184.1; plasmid unnamed:NZ_CP018185.1/CP018185.1	-	2	4503	4148	12/7/16	3/28/17	Complete Genome	Chinese Academy of Medical Sciences & Peking Union Medical College	SAMN06060088	GCA_001890405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/405/GCA_001890405.1_ASM189040v1	-	KH2
Bacillus subtilis	1423	PRJNA349089	349089	Terrabacteria group	Firmicutes	4.20405	43.4008	chromosome:NZ_CP017763.1/CP017763.1; plasmid unnamed1:NZ_CP017764.1/CP017764.1; plasmid unnamed2:NZ_CP017765.1/CP017765.1	-	3	4484	4133	12/9/16	3/28/17	Complete Genome	Shanghai Ocean University	SAMN05920240	GCA_001902555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/555/GCA_001902555.1_ASM190255v1	-	29R7-12
Odoribacter splanchnicus	28118	PRJEB6403	251923	FCB group	Bacteroidetes/Chlorobi group	4.39218	43.4	chromosome 1:NZ_LT906459.1/LT906459.1	-	1	3752	3560	8/15/17	8/28/17	Complete Genome	SC	SAMEA44545918	GCA_900187175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/175/GCA_900187175.1_51342_A02	-	NCTC10825
Phoenicibacter massiliensis	1944646	PRJEB19959	379093	Terrabacteria group	Actinobacteria	1.44796	43.4	chromosome contig00001:NZ_LT821227.1/LT821227.1	-	1	1267	1192	3/14/17	3/18/17	Complete Genome	URMITE	SAMEA103910411	GCA_900169485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/485/GCA_900169485.1_PRJEB19959	-	Marseille-P3241
Xenorhabdus hominickii	351679	PRJNA324515	324515	Proteobacteria	Gammaproteobacteria	4.5227	43.4	chromosome:NZ_CP016176.1/CP016176.1	-	1	4207	3820	9/7/16	4/17/17	Complete Genome	Andong National University	SAMN05207277	GCA_001721185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/185/GCA_001721185.1_ASM172118v1	-	ANU1
Kangiella sediminilitoris	1144748	PRJNA293128	293128	Proteobacteria	Gammaproteobacteria	2.49614	43.4	chromosome:NZ_CP012418.1/CP012418.1	-	1	2367	2305	8/23/16	4/13/17	Complete Genome	Korea Research Institute of Bioscience and Biotechnology	SAMN03997282	GCA_001708405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/405/GCA_001708405.1_ASM170840v1	-	KCTC 23892
Lactobacillus reuteri CF48-3A	525341	PRJNA31553	31553	Terrabacteria group	Firmicutes	2.1079	39	-	ACHG01	92	2091	1936	3/11/09	3/30/17	Scaffold	BCM	SAMN00001503	GCA_000159615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/615/GCA_000159615.1_ASM15961v1	-	CF48-3A
Ehrlichia ruminantium	779	PRJDB4736	320920	Proteobacteria	Alphaproteobacteria	1.4578	27.5	-	BDDN01	183	1005	846	5/3/16	4/5/17	Contig	Graduate School of Veterinary Medicine Hokkaido University	SAMD00050890	GCA_001686325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/325/GCA_001686325.1_ER_SAN_1.0	27313287	Sankat 430
Shewanella baltica	62322	PRJNA315288	315288	Proteobacteria	Gammaproteobacteria	5.16758	46.2	-	LWED01	91	4495	4276	4/18/16	4/5/17	Contig	University of Gdansk	SAMN04555237	GCA_001620325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/325/GCA_001620325.1_ASM162032v1	-	M1
Shigella dysenteriae	622	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.0181	51	-	MSJU02	285	4319	3787	1/4/17	3/4/17	Scaffold	University of California at Davis	SAMN03358408	GCA_001932975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/975/GCA_001932975.2_ASM193297v2	-	BCW_4870
Anaplasma marginale str. St. Maries	234826	PRJNA64635	64635	Proteobacteria	Alphaproteobacteria	1.15524	49.8	-	AFMU01	60	1008	914	5/31/11	3/30/17	Contig	University of Florida College of Veterinary Medicine	SAMN02469627	GCA_000215525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/525/GCA_000215525.2_ASM21552v2	21596083	St. Maries
Odoribacter splanchnicus DSM 20712	709991	PRJNA43469	43469	FCB group	Bacteroidetes/Chlorobi group	4.39229	43.4	chromosome:NC_015160.1/CP002544.1	-	1	3753	3566	2/28/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713588	GCA_000190535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/535/GCA_000190535.1_ASM19053v1	21677857	DSM 220712
Bacteroides fragilis CL03T12C07	997879	PRJNA64813	64813	FCB group	Bacteroidetes/Chlorobi group	5.22622	43.5	-	AGXL01	7	4671	4448	6/25/12	5/18/17	Scaffold	Broad Institute	SAMN02463922	GCA_000273115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/115/GCA_000273115.1_Bact_frag_CL03T12C07_V1	-	CL03T12C07
Shigella sonnei 3233-85	766163	PRJNA49107	49107	Proteobacteria	Gammaproteobacteria	4.99792	51.1	-	AKND01	72	5599	4544	6/14/12	8/4/17	Contig	Institute for Genome Sciences	SAMN00110653	GCA_000268005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/005/GCA_000268005.1_ASM26800v1	-	3233-85
Bacteroides fragilis 638R	862962	PRJNA50405	50405	FCB group	Bacteroidetes/Chlorobi group	5.37312	43.4	chromosome:NC_016776.1/FQ312004.1	-	1	4762	4497	7/23/10	5/18/17	Complete Genome	The Wellcome Trust Sanger Institute	SAMEA3138381	GCA_000210835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/835/GCA_000210835.1_ASM21083v1	20829291	638R
Streptococcus sanguinis SK36	388919	PRJNA13942	13942	Terrabacteria group	Firmicutes	2.38843	43.4	chromosome:NC_009009.1/CP000387.1	-	1	2348	2270	2/9/07	8/28/16	Complete Genome	Virginia Commonwealth University	SAMN02604299	GCA_000014205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/205/GCA_000014205.1_ASM1420v1	17277061	SK36
Xanthomonas axonopodis pv. axonopodis	316581	PRJNA254369	254369	Proteobacteria	Gammaproteobacteria	4.41475	64.6	-	JPYE01	1118	-	-	10/21/15	10/21/15	Contig	Institute for Agricultural and Fisheries Research (ILVO)	SAMN02903173	GCA_001401595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/595/GCA_001401595.1_Xaa_LMG982	-	LMG 982
Histophilus somni	731	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.25352	37.2	-	LQGG01	80	2124	1972	1/4/17	4/6/17	Contig	"University of California, Davis"	SAMN04366580	GCA_001931035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/035/GCA_001931035.1_ASM193103v1	-	3692HS
Gloeocapsa sp. PCC 7428	1173026	PRJNA158831	158831	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.88271	43.3899	chromosome:NC_019745.1/CP003646.1; plasmid pGLO7428.01:NC_019746.1/CP003647.1; plasmid pGLO7428.02:NC_020051.1/CP003648.1; plasmid pGLO7428.03:NC_019759.1/CP003649.1; plasmid pGLO7428.04:NC_019747.1/CP003650.1	-	5	5215	4996	12/6/12	4/8/17	Complete Genome	JGI	SAMN02261347	GCA_000317555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/555/GCA_000317555.1_ASM31755v1	-	PCC 7428
Bacillus subtilis	1423	PRJNA377766	377766	Terrabacteria group	Firmicutes	4.29982	43.3355	chromosome:NZ_CP020102.1/CP020102.1; plasmid pBS32:NZ_CP020103.1/CP020103.1	-	2	4517	4335	3/21/17	3/23/17	Complete Genome	"University of Michigan, Ann Arbor"	SAMN06472805	GCA_002055965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/965/GCA_002055965.1_ASM205596v1	-	NCIB 3610
Leuconostoc garlicum	255248	PRJNA325075	325075	Terrabacteria group	Firmicutes	1.71519	43.3281	chromosome:NZ_CP016329.1/CP016329.1; plasmid unnamed1:NZ_CP016330.1/CP016330.1; plasmid unnamed2:NZ_CP016331.1/CP016331.1	-	3	1738	1602	2/13/17	4/17/17	Complete Genome	KFRI	SAMN05219201	GCA_001998805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/805/GCA_001998805.1_ASM199880v1	-	KFRI01
Aquifex aeolicus VF5	224324	PRJNA215	215	Aquificae	Aquificae	1.59079	43.3239	chromosome:NC_000918.1/AE000657.1; plasmid ece1:NC_001880.1/AE000667.1	-	2	1605	1526	7/25/97	8/3/16	Complete Genome	DIVERSA	SAMN02603207	GCA_000008625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/625/GCA_000008625.1_ASM862v1	9537320	VF5
Mucilaginibacter sp. PAMC 26640	1300914	PRJNA314933	314933	FCB group	Bacteroidetes/Chlorobi group	5.61802	43.3138	chromosome:NZ_CP014773.1/CP014773.1; plasmid unnamed:NZ_CP014772.1/CP014772.1	-	2	4939	4794	3/22/16	4/12/17	Complete Genome	Korea Polar Research Institute	SAMN04545527	GCA_001596135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/135/GCA_001596135.1_ASM159613v1	-	PAMC 26640
Bacillus subtilis	1423	PRJNA384709	384709	Terrabacteria group	Firmicutes	4.19603	43.3	chromosome:NZ_CP022891.1/CP022891.1	-	1	4447	4083	8/24/17	8/27/17	Complete Genome	Dankook University	SAMN07482641	GCA_002269195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/195/GCA_002269195.1_ASM226919v1	-	DKU_NT_03
Bacillus atrophaeus	1452	PRJNA396635	396635	Terrabacteria group	Firmicutes	4.32582	43.3	chromosome:NZ_CP022653.1/CP022653.1	-	1	4294	4015	8/8/17	8/10/17	Complete Genome	Shandong Agricultural University	SAMN07430096	GCA_002243495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/495/GCA_002243495.1_ASM224349v1	-	GQJK17
Bacillus atrophaeus	1452	PRJNA386751	386751	Terrabacteria group	Firmicutes	4.18082	43.3	chromosome:NZ_CP021500.1/CP021500.1	-	1	4169	3897	6/6/17	6/16/17	Complete Genome	Microbial Institiue for Fermentation Industry	SAMN07125920	GCA_002173495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/495/GCA_002173495.1_ASM217349v1	-	SRCM101359
Bdellovibrio bacteriovorus W	765869	PRJNA49011	49011	Proteobacteria	Oligoflexia	3.00699	43.3	chromosome:NZ_CP002190.1/CP002190.1	-	1	2834	2760	2/3/14	4/2/17	Complete Genome	University of Oklahoma Health Sciences center	SAMN03081425	GCA_000525675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/675/GCA_000525675.1_ASM52567v1	-	W
Agrobacterium tumefaciens str. CFBP 5771	1183421	PRJEB12180	379251	Proteobacteria	Alphaproteobacteria	5.65117	58.5	-	FCNM01	3	5373	5173	3/16/17	4/3/17	Scaffold	Genoscope CEA	SAMEA3722804	GCA_900039255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/255/GCA_900039255.1_AHY_PRJEB12180_v1	-	CFBP 5771
secondary endosymbiont of Ctenarytaina eucalypti	1199245	PRJNA165193	165193	Proteobacteria	Gammaproteobacteria	1.44114	43.3	chromosome:NC_018419.1/CP003546.1	-	1	832	770	8/13/12	9/4/17	Complete Genome	Yale University	SAMN02604351	GCA_000287335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/335/GCA_000287335.1_ASM28733v1	22821013	-
Shewanella piezotolerans WP3	225849	PRJNA17675	17675	Proteobacteria	Gammaproteobacteria	5.39648	43.3	chromosome:NC_011566.1/CP000472.1	-	1	4665	4395	11/13/08	3/22/17	Complete Genome	James D. Watson Institute of Genome Sciences	SAMN02603456	GCA_000014885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/885/GCA_000014885.1_ASM1488v1	18398463	WP3
Bacillus licheniformis	1402	PRJNA386754	386754	Terrabacteria group	Firmicutes	4.19928	43.2906	chromosome:NZ_CP021507.1/CP021507.1; plasmid pBL1441-1:NZ_CP021508.1/CP021508.1	-	2	4455	4102	6/6/17	6/8/17	Complete Genome	Microbial Institiue for Fermentation Industry	SAMN07125936	GCA_002173615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/615/GCA_002173615.1_ASM217361v1	-	SRCM101441
Bacillus subtilis	1423	PRJNA286056	286056	Terrabacteria group	Firmicutes	4.19542	43.2906	chromosome:NZ_CP015222.1/CP015222.1; plasmid unnamed:NZ_CP015223.1/CP015223.1	-	2	4447	4080	9/28/16	3/28/17	Complete Genome	Seoul National University	SAMN03764478	GCA_001747445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/445/GCA_001747445.1_ASM174744v1	-	HRBS-10TDI13
Bacillus subtilis subsp. subtilis	135461	PRJNA389633	389633	Terrabacteria group	Firmicutes	4.16919	43.2852	chromosome:NZ_CP021892.1/CP021892.1; plasmid pBS333:NZ_CP021893.1/CP021893.1	-	2	4437	4048	6/20/17	6/22/17	Complete Genome	Microbial Institute for Fermentation Industry	SAMN07204274	GCA_002201995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/995/GCA_002201995.1_ASM220199v1	-	SRCM100333
Actinobacillus pleuropneumoniae serovar 10 str. D13039	754259	PRJNA47303	47303	Proteobacteria	Gammaproteobacteria	2.27209	41.2	-	ADOJ01	44	2181	2064	9/13/10	3/30/17	Contig	Huazhong Agricultural University	SAMN02469621	GCA_000178595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/595/GCA_000178595.1_ASM17859v1	20802045	D13039
Leptospira interrogans serovar Hardjo-prajitno	38347	PRJNA296687	296687	Spirochaetes	Spirochaetia	4.69232	35.0925	chromosome 1:NZ_CP013147.1/CP013147.1; chromosome 2:NZ_CP013148.1/CP013148.1	-	2	4242	3834	11/13/15	4/10/17	Chromosome	INDICASAT-AIP	SAMN04102139	GCA_001443305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/443/305/GCA_001443305.1_ASM144330v1	-	Hardjoprajitno
Bacteroides fragilis YCH46	295405	PRJNA13067	13067	FCB group	Bacteroidetes/Chlorobi group	5.31099	43.2378	chromosome:NC_006347.1/AP006841.1; plasmid pBFY46:NC_006297.1/AP006842.1	-	2	4717	4625	9/17/04	7/27/17	Complete Genome	Kitasato Univ.	SAMD00061068	GCA_000009925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/925/GCA_000009925.1_ASM992v1	15466707	YCH46
Dehalobacterium formicoaceticum	51515	PRJNA391200	391200	Terrabacteria group	Firmicutes	3.76654	43.2	chromosome:NZ_CP022121.1/CP022121.1	-	1	3642	3429	7/24/17	8/3/17	Complete Genome	The University of Tennessee  	SAMN07259296	GCA_002224645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/645/GCA_002224645.1_ASM222464v1	-	DMC
Erysipelotrichaceae bacterium I46	1834207	PRJNA317592	317592	Terrabacteria group	Firmicutes	4.4683	43.2	chromosome:NZ_CP015404.2/CP015404.2	-	1	4430	4138	7/20/16	5/6/17	Complete Genome	University of Bern	SAMN04621622	GCA_001688965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/965/GCA_001688965.2_ASM168896v2	-	I46
Bacteroides fragilis	817	PRJNA290855	290855	FCB group	Bacteroidetes/Chlorobi group	4.90221	43.2	chromosome:NZ_CP012706.1/CP012706.1	-	1	4280	4068	7/8/16	4/5/17	Complete Genome	Seqomics Ltd	SAMN03921941	GCA_001682215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/215/GCA_001682215.1_ASM168221v1	-	S14
Bacillus subtilis subsp. globigii	1496303	PRJNA314703	314703	Terrabacteria group	Firmicutes	4.17548	43.2	chromosome:NZ_CP014840.1/CP014840.1	-	1	4205	3996	3/25/16	3/28/17	Complete Genome	"New England Biolabs, Inc."	SAMN04539622	GCA_001597265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/265/GCA_001597265.1_ASM159726v1	27231364	ATCC 49760
Mucilaginibacter gotjawali	1550579	PRJDB4412	312707	FCB group	Bacteroidetes/Chlorobi group	6.3439	43.2	chromosome:AP017313.1	-	1	4507	4459	2/19/16	2/19/16	Complete Genome	Korea Research Institute of Bioscience and Biotechnology (KRIBB)	SAMD00043916	GCA_002355435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/435/GCA_002355435.1_ASM235543v1	-	SA3-7
Bacteroides fragilis	817	PRJNA278510	278510	FCB group	Bacteroidetes/Chlorobi group	5.28223	43.2	chromosome:NZ_CP011073.1/CP011073.1	-	1	4682	4377	3/30/15	4/3/17	Complete Genome	FSBIS SRI PCM FMBA of Russia	SAMN03420872	GCA_000965785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/785/GCA_000965785.1_ASM96578v1	25953165	BOB25
Bacillus atrophaeus	1452	PRJNA273316	273316	Terrabacteria group	Firmicutes	4.17483	43.2	chromosome:NZ_CP010778.1/CP010778.1	-	1	4202	3995	1/29/15	4/3/17	Complete Genome	BEI Resources/American Type	SAMN03290662	GCA_000830075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/075/GCA_000830075.1_ASM83007v1	-	NRS 1221A
Tropheryma whipplei str. Endo27	1294031	PRJEB1448	189636	Terrabacteria group	Actinobacteria	0.927598	46.3	-	CAUS02	1	866	777	3/26/13	4/2/17	Scaffold	URMITE	SAMEA2272435	GCA_000359245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/245/GCA_000359245.2_G164	-	Endo27
candidate division WWE3 bacterium RAAC2_WWE3_1	1394710	PRJNA217183	217183	unclassified Bacteria	Bacteria candidate phyla	0.878109	43.2	chromosome:CP006914.1	-	1	919	871	12/4/13	9/19/17	Complete Genome	"University of California, Berkeley"	SAMN00998488	GCA_000503835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/835/GCA_000503835.1_ASM50383v1	-	RAAC2_WWE3_1
Archaeoglobus sulfaticallidus PM70-1	387631	PRJNA196460	196460	Euryarchaeota	Archaeoglobi	2.07693	43.2	chromosome:NC_021169.1/CP005290.1	-	1	2267	2180	4/30/13	4/8/17	Complete Genome	"University of Bergen, Centre for Geobiology, Department of Biology"	SAMN02028569	GCA_000385565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/565/GCA_000385565.1_ASM38556v1	23833130	PM70-1
Clostridium perfringens	1502	PRJNA363042	363042	Terrabacteria group	Firmicutes	3.8109	28.1856	chromosome:NZ_CP019576.1/CP019576.1; plasmid pDel1_1:NZ_CP019577.1/CP019577.1; plasmid pDel1_2:NZ_CP019578.1/CP019578.1; plasmid pDel1_4:NZ_CP019580.1/CP019580.1; plasmid pDle1_3:NZ_CP019579.1/CP019579.1	-	5	3556	3292	3/3/17	3/6/17	Chromosome	USDA-ARS	SAMN06252079	GCA_002012325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/325/GCA_002012325.1_ASM201232v1	-	Del1
Xanthomonas campestris pv. campestris str. CN16	1281284	PRJNA185974	185974	Proteobacteria	Gammaproteobacteria	5.02478	65.023	chromosome:NZ_CM001897.1/CM001897.1; plasmid unnamed-p1:NZ_CM001898.1/CM001898.1; plasmid unnamed-p2:NZ_CM001899.1/CM001899.1; plasmid unnamed-p3:NZ_CM001900.1/CM001900.1; plasmid unnamed-p4:NZ_CM001901.1/CM001901.1; plasmid unnamed-p5:NZ_CM001902.1/CM001902.1; plasmid unnamed-p6:NZ_CM001903.1/CM001903.1	AQON01	12	4496	4162	5/24/13	4/1/17	Chromosome	CNRS	SAMN02469927	GCA_000403555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/555/GCA_000403555.1_20121101	-	CN16
Bacillus atrophaeus 1942	720555	PRJNA46075	46075	Terrabacteria group	Firmicutes	4.16827	43.2	chromosome:NC_014639.1/CP002207.1	-	1	4233	4026	11/2/10	6/15/17	Complete Genome	Transformational Medical Technologies Program	SAMN01816415	GCA_000165925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/165/925/GCA_000165925.1_ASM16592v1	21464989	1942
Planococcus antarcticus DSM 14505	1185653	PRJNA328184	328184	Terrabacteria group	Firmicutes	3.80462	43.1411	chromosome:NZ_CP016534.2/CP016534.2; plasmid pPA05-1:NZ_CP016535.2/CP016535.2; plasmid unnamed2:NZ_CP016536.1/CP016536.1	-	3	3770	3506	7/20/16	4/13/17	Complete Genome	University of Malaya	SAMN05366139	GCA_001687565.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/565/GCA_001687565.2_ASM168756v2	-	DSM 14505
Staphylococcus epidermidis W23144	525376	PRJNA34655	34655	Terrabacteria group	Firmicutes	2.64658	32.3	-	ACJC01	91	2532	2395	3/16/09	3/22/17	Scaffold	Baylor College of Medicine	SAMN00002221	GCA_000160235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/235/GCA_000160235.1_ASM16023v1	-	W23144
Bacteroides fragilis NCTC 9343	272559	PRJNA46	46	FCB group	Bacteroidetes/Chlorobi group	5.2417	43.1233	chromosome:NC_003228.3/CR626927.1; plasmid pBF9343:NC_006873.1/CR626928.1	-	2	4637	4395	11/6/01	5/28/17	Complete Genome	Sanger Institute	SAMEA1705957	GCA_000025985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/985/GCA_000025985.1_ASM2598v1	15746427	-
Leuconostoc lactis	1246	PRJNA327015	327015	Terrabacteria group	Firmicutes	1.78807	43.1131	chromosome:NZ_CP016598.1/CP016598.1; plasmid pWK40-1:NZ_CP016599.1/CP016599.1; plasmid pWK40-2:NZ_CP016600.1/CP016600.1; plasmid pWK40-3:NZ_CP016601.1/CP016601.1	-	4	1759	1643	8/2/16	4/13/17	Complete Genome	world institute of kimchi	SAMN05300424	GCA_001698145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/145/GCA_001698145.1_ASM169814v1	-	WiKim40
Bacteroides fragilis	817	PRJEB10044	292517	FCB group	Bacteroidetes/Chlorobi group	5.18897	43.1	chromosome scaffold1:NZ_LN877293.1/LN877293.1	-	1	4545	4308	8/25/15	4/4/17	Complete Genome	ED	SAMEA3501569	GCA_001286525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/525/GCA_001286525.1_BFBE1.1	-	BE1
Methanosarcina siciliae HI350	1434119	PRJNA230952	230952	Euryarchaeota	Methanomicrobia	4.94111	43.1	chromosome:CP009507.1	-	1	3965	3900	4/7/15	4/7/15	Complete Genome	University of Illinois at Urbana-Champaign	SAMN03074588	GCA_000970125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/125/GCA_000970125.1_ASM97012v1	-	HI350
archaeon GW2011_AR10	1579370	PRJNA268032	268032	unclassified Archaea	unclassified Archaea (miscellaneous)	1.24143	43.1	chromosome:CP010424.1	-	1	1373	1339	1/29/15	9/21/17	Complete Genome	"Banfield Lab, University of California, Berkeley"	SAMN03217306	GCA_000830275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/275/GCA_000830275.1_ASM83027v1	-	-
Thermococcus litoralis DSM 5473	523849	PRJNA81925	81925	Euryarchaeota	Thermococci	2.21517	43.1	chromosome:NC_022084.1/CP006670.1	-	1	2453	2306	8/13/13	4/17/17	Complete Genome	"New England Biolabs, Inc."	SAMN02603679	GCA_000246985.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/985/GCA_000246985.3_ASM24698v3	22493191	DSM 5473
Caldivirga maquilingensis IC-167	397948	PRJNA17421	17421	TACK group	Crenarchaeota	2.07757	43.1	chromosome:NC_009954.1/CP000852.1	-	1	2068	2005	10/5/07	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00623034	GCA_000018305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/305/GCA_000018305.1_ASM1830v1	-	IC-167
Hydrogenovibrio crunogenus XCL-2	317025	PRJNA13018	13018	Proteobacteria	Gammaproteobacteria	2.42773	43.1	chromosome:NC_007520.2/CP000109.2	-	1	2310	2244	10/31/05	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02598288	GCA_000012605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/605/GCA_000012605.1_ASM1260v1	-	XCL-2
Veillonella rodentium	248315	PRJEB6403	251923	Terrabacteria group	Firmicutes	2.04129	43	chromosome 1:NZ_LT906470.1/LT906470.1	-	1	1881	1779	8/15/17	8/28/17	Complete Genome	SC	SAMEA44547418	GCA_900187285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/285/GCA_900187285.1_51342_C02	-	NCTC12018
Thermosulfidibacter takaii ABI70S6	1298851	PRJDB865	304690	Aquificae	Aquificae	1.81667	43	chromosome Unknown:NZ_AP013035.1/AP013035.1	-	1	1878	1814	12/2/15	4/16/17	Complete Genome	Japan Agency for Marine-Earth Science and Technology	SAMD00061062	GCA_001547735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/735/GCA_001547735.1_ASM154773v1	18319474	ABI70S6
Palaeococcus pacificus DY20341	1343739	PRJNA207495	207495	Euryarchaeota	Thermococci	1.85937	43	chromosome:NZ_CP006019.1/CP006019.1	-	1	2016	1950	7/14/14	4/17/17	Complete Genome	"The third institute of oceanography of SOA,PRChina"	SAMN03081469	GCA_000725425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/425/GCA_000725425.1_ASM72542v1	26383653	DY20341
Microcystis aeruginosa NIES-2481	1698524	PRJNA291808	291808	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.29301	42.9	chromosome:NZ_CP012375.1/CP012375.1	-	1	4185	3832	8/15/16	4/5/17	Complete Genome	National Institute for Environmental Studies	SAMN03955402	GCA_001704955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/955/GCA_001704955.1_ASM170495v1	-	NIES-2481
Staphylococcus epidermidis M23864:W2(grey)	525375	PRJNA34643	34643	Terrabacteria group	Firmicutes	2.52335	32.3	-	ADMU01	13	2498	2374	3/22/10	3/22/17	Scaffold	Baylor College of Medicine	SAMN02299424	GCA_000164075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/075/GCA_000164075.1_ASM16407v1	-	M23864:W2(grey)
Microcystis aeruginosa NIES-2549	1641812	PRJNA280892	280892	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.29421	42.9	chromosome:NZ_CP011304.1/CP011304.1	-	1	4168	3843	4/29/15	4/3/17	Complete Genome	National Institute for Environmental Studies	SAMN03480410	GCA_000981785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/785/GCA_000981785.1_ASM98178v1	26021928	NIES-2549
Methanosarcina siciliae T4/M	1434120	PRJNA230953	230953	Euryarchaeota	Methanomicrobia	5.01756	42.9	chromosome:NZ_CP009506.1/CP009506.1	-	1	4300	3930	4/7/15	4/10/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN03074589	GCA_000970085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/085/GCA_000970085.1_ASM97008v1	-	T4/M
Xanthomonas campestris pv. campestris str. CN15	1281283	PRJNA185973	185973	Proteobacteria	Gammaproteobacteria	5.02575	65.1044	chromosome:NZ_CM001890.1/CM001890.1; plasmid unnamed-p1:NZ_CM001891.1/CM001891.1; plasmid unnamed-p2:NZ_CM001892.1/CM001892.1; plasmid unnamed-p3:NZ_CM001893.1/CM001893.1; plasmid unnamed-p4:NZ_CM001894.1/CM001894.1; plasmid unnamed-p5:NZ_CM001895.1/CM001895.1; plasmid unnamed-p6:NZ_CM001896.1/CM001896.1	AQOO01	13	4496	4162	5/24/13	4/1/17	Chromosome	CNRS	SAMN02469928	GCA_000403575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/575/GCA_000403575.1_20121031	-	CN15
Clostridium perfringens	1502	PRJNA363041	363041	Terrabacteria group	Firmicutes	3.37866	28.5836	chromosome:NZ_CP019468.1/CP019468.1; plasmid pCP15_1:NZ_CP019568.1/CP019568.1; plasmid pCP15_2:NZ_CP019569.1/CP019569.1; plasmid pCP15_3:NZ_CP019570.1/CP019570.1; plasmid pCP15_4:NZ_CP019571.1/CP019571.1	-	5	3077	2908	3/3/17	3/6/17	Chromosome	USDA-ARS	SAMN06252080	GCA_002018235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/235/GCA_002018235.1_ASM201823v1	-	CP15
Halothece sp. PCC 7418	65093	PRJNA40817	40817	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.17917	42.9	chromosome:NC_019779.1/CP003945.1	-	1	3878	3710	12/7/12	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02232029	GCA_000317635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/635/GCA_000317635.1_ASM31763v1	-	PCC 7418
Desulfosporosinus orientis DSM 765	768706	PRJNA66191	66191	Terrabacteria group	Firmicutes	5.86308	42.9	chromosome:NC_016584.1/CP003108.1	-	1	5509	5229	11/16/11	5/18/17	Complete Genome	JGI	SAMN02261424	GCA_000235605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/605/GCA_000235605.1_ASM23560v1	23105050	DSM 765
Tropheryma whipplei str. Sali28	1294032	PRJEB1449	189646	Terrabacteria group	Actinobacteria	0.927465	46.4	-	CAUT02	1	872	784	3/26/13	4/2/17	Scaffold	URMITE	SAMEA2272646	GCA_000359265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/265/GCA_000359265.2_G165	-	Sali28
Psychrobacter alimentarius	261164	PRJNA315071	315071	Proteobacteria	Gammaproteobacteria	3.34944	42.8823	chromosome:NZ_CP014945.1/CP014945.1; plasmid pPAMC27889:NZ_CP014946.1/CP014946.1	-	2	2793	2698	4/4/16	4/17/17	Complete Genome	Korea Polar Research Institute	SAMN04549283	GCA_001606025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/025/GCA_001606025.1_ASM160602v1	-	PAMC 27889
Coxiella burnetii	777	PRJNA305987	305987	Proteobacteria	Gammaproteobacteria	2.1308	42.8369	chromosome:NZ_CP013667.1/CP013667.1; plasmid QpH1:NZ_CP013668.1/CP013668.1	-	2	2401	2116	2/25/16	4/10/17	Complete Genome	Central Veterinary Institute part of Wageningen UR	SAMN04337144	GCA_001572745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/745/GCA_001572745.1_ASM157274v1	27103714	3262
Acinetobacter soli	487316	PRJNA336080	336080	Proteobacteria	Gammaproteobacteria	3.63635	42.8246	chromosome:NZ_CP016896.1/CP016896.1; plasmid pGFJ1:NZ_CP016897.1/CP016897.1; plasmid pGFJ2:NZ_CP016898.1/CP016898.1; plasmid pGFJ3:NZ_CP016899.1/CP016899.1; plasmid pGFJ4:NZ_CP016900.1/CP016900.1; plasmid pGFJ5:NZ_CP016901.1/CP016901.1; plasmid pGFJ6:NZ_CP016902.1/CP016902.1; plasmid pGFJ7:NZ_CP016903.1/CP016903.1	-	8	3451	3305	1/17/17	4/6/17	Complete Genome	Nagaoka University of Technology	SAMN05554081	GCA_001953195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/195/GCA_001953195.1_ASM195319v1	-	GFJ2
Bacteroides thetaiotaomicron VPI-5482	226186	PRJNA399	399	FCB group	Bacteroidetes/Chlorobi group	6.2934	42.8231	chromosome:NC_004663.1/AE015928.1; plasmid p5482:NC_004703.1/AY171301.1	-	2	4902	4816	3/28/03	7/27/17	Complete Genome	Washington University Department of Molecular Biology and Pharmacology	SAMN02604314	GCA_000011065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/065/GCA_000011065.1_ASM1106v1	12663928	VPI-5482
Fluviicola sp. RIFCSPHIGHO2_02_FULL_43_260	1798018	PRJNA288027	288027	FCB group	Bacteroidetes/Chlorobi group	4.55144	42.8	chromosome:CP022585.1	-	1	3900	3838	8/8/17	8/8/17	Complete Genome	"Banfield Lab, University of California, Berkeley"	SAMN07374784	GCA_002243285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/285/GCA_002243285.1_ASM224328v1	-	-
Aerococcus urinaehominis	128944	PRJNA308559	308559	Terrabacteria group	Firmicutes	1.8314	42.8	chromosome:NZ_CP014163.1/CP014163.1	-	1	1716	1616	2/1/16	4/11/17	Complete Genome	"Department of Clinical Microbiology, Slagelse Hospital, Denmark"	SAMN04419115	GCA_001543245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/245/GCA_001543245.1_ASM154324v1	27103727	CCUG42038B
Enterococcus casseliflavus EC20	565655	PRJNA32935	32935	Terrabacteria group	Firmicutes	3.42728	42.8	chromosome:NC_020995.1/CP004856.1	-	1	3285	3148	4/11/13	4/1/17	Complete Genome	Broad Institute	SAMN02596921	GCA_000157355.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/355/GCA_000157355.2_ASM15735v2	-	EC20
Zobellia galactanivorans	63186	PRJEB8976	280717	FCB group	Bacteroidetes/Chlorobi group	5.52171	42.8	chromosome:NC_015844.1/FP476056.1	-	1	4515	4429	7/10/11	4/17/17	Complete Genome	Genoscope CEA	SAMEA3315864	GCA_000973105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/105/GCA_000973105.1_ASM97310v1	22513138	DsiJT
Leptospira interrogans serovar Copenhageni/Icterohaemorrhagiae	766041	PRJNA324239	324239	Spirochaetes	Spirochaetia	4.58375	35	chromosome 1:NZ_CP018146.1/CP018146.1; chromosome 2:NZ_CP018147.1/CP018147.1	-	2	4094	3437	12/6/16	4/10/17	Chromosome	Universidade Federal de Pelotas	SAMN05195242	GCA_001683775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/775/GCA_001683775.2_ASM168377v2	-	Piscina
Actinobacillus pleuropneumoniae serovar 11 str. 56153	754260	PRJNA47305	47305	Proteobacteria	Gammaproteobacteria	2.26662	41.2	-	ADOK01	47	2182	2067	9/13/10	3/30/17	Contig	Huazhong Agricultural University	SAMN02469624	GCA_000178615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/615/GCA_000178615.1_ASM17861v1	20802045	56153
Psychrobacter arcticus 273-4	259536	PRJNA9633	9633	Proteobacteria	Gammaproteobacteria	2.6507	42.8	chromosome:NC_007204.1/CP000082.1	-	1	2250	2113	7/20/05	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02598544	GCA_000012305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/305/GCA_000012305.1_ASM1230v1	20154119	273-4
Photorhabdus luminescens subsp. laumondii TTO1	243265	PRJNA9605	9605	Proteobacteria	Gammaproteobacteria	5.68899	42.8	chromosome:NC_005126.1/BX470251.1	-	1	4977	4669	9/27/03	4/11/17	Complete Genome	Institut Pasteur	SAMEA3138334	GCA_000196155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/155/GCA_000196155.1_ASM19615v1	14528314	TTO1
Terribacillus aidingensis	586416	PRJNA252898	252898	Terrabacteria group	Firmicutes	3.57708	42.7615	chromosome:NZ_CP008876.1/CP008876.1; plasmid pT1:NZ_CP008877.1/CP008877.1	-	2	3605	3492	7/14/14	4/17/17	Complete Genome	Zhejiang Agricultural and Forestry University	SAMN02864241	GCA_000725365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/365/GCA_000725365.1_ASM72536v1	-	MP602
Geobacillus sp. WCH70	471223	PRJNA20805	20805	Terrabacteria group	Firmicutes	3.5088	42.7597	chromosome:NC_012793.1/CP001638.1; plasmid pWCH7001:NC_012794.1/CP001639.1; plasmid pWCH7002:NC_012790.1/CP001640.1	-	3	3580	3186	6/11/09	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000635	GCA_000023385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/385/GCA_000023385.1_ASM2338v1	-	WCH70
Candidatus Hoaglandella endobia	1778263	PRJEB12071	316508	Proteobacteria	Gammaproteobacteria	0.636713	42.7415	chromosome I:NZ_LN999835.1/LN999835.1; plasmid II:NZ_LN999836.1/LN999836.1; plasmid III:NZ_LN999837.1/LN999837.1	-	3	573	515	3/26/16	4/12/17	Complete Genome	UNIVERSITY OF SOUTH BOHEMIA	SAMEA3725908	GCA_900044015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/015/GCA_900044015.1_HETPER1	-	-
Agrobacterium tumefaciens str. B6	1183423	PRJEB12187	379247	Proteobacteria	Alphaproteobacteria	5.84583	59.2	-	FCNL01	4	5699	5403	3/16/17	4/3/17	Scaffold	Genoscope CEA	SAMEA3722810	GCA_900045375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/375/GCA_900045375.1_AHY_PRJEB12187_v1	-	B6
Coxiella burnetii RSA 331	360115	PRJNA16791	16791	Proteobacteria	Gammaproteobacteria	2.05374	42.7364	chromosome:NC_010117.1/CP000890.1; plasmid QpH1:NC_010115.1/CP000889.1	-	2	2272	2011	12/5/07	3/30/17	Complete Genome	TIGR	SAMN02604053	GCA_000018745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/745/GCA_000018745.1_ASM1874v1	-	RSA 331
Bacteroides cellulosilyticus	246787	PRJNA289334	289334	FCB group	Bacteroidetes/Chlorobi group	7.08483	42.7	chromosome:NZ_CP012801.1/CP012801.1	-	1	5447	5237	10/16/15	4/11/17	Complete Genome	Washington University in St. Louis	SAMN03852682	GCA_001318345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/345/GCA_001318345.1_ASM131834v1	26430127	WH2
Bacteroides thetaiotaomicron	818	PRJNA289334	289334	FCB group	Bacteroidetes/Chlorobi group	6.48768	42.7	chromosome:NZ_CP012937.1/CP012937.1	-	1	5145	4929	10/15/15	4/4/17	Complete Genome	Washington University in St. Louis	SAMN03852684	GCA_001314975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/975/GCA_001314975.1_ASM131497v1	26430127	7330
Pyrococcus sp. NA2	342949	PRJNA65431	65431	Euryarchaeota	Thermococci	1.86132	42.7	chromosome:NC_015474.1/CP002670.1	-	1	2054	1924	4/29/11	4/17/17	Complete Genome	Korea Ocean Research and Development Institute	SAMN02603477	GCA_000211475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/211/475/GCA_000211475.1_ASM21147v1	21602357	NA2
Flavobacteriaceae bacterium 3519-10	531844	PRJNA38559	38559	FCB group	Bacteroidetes/Chlorobi group	2.7681	42.7	chromosome:NC_013062.1/CP001673.1	-	1	2553	2481	8/5/09	4/17/17	Complete Genome	University of Nevada Las Vegas	SAMN02604231	GCA_000023725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/725/GCA_000023725.1_ASM2372v1	18622572	3519-10
Methanosarcina acetivorans C2A	188937	PRJNA290	290	Euryarchaeota	Methanomicrobia	5.75149	42.7	chromosome:NC_003552.1/AE010299.1	-	1	4965	4567	3/20/02	5/19/17	Complete Genome	Broad Institute	SAMN03081414	GCA_000007345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/345/GCA_000007345.1_ASM734v1	11932238	C2A
Coxiella burnetii 'MSU Goat Q177'	360116	PRJNA17747	17747	Proteobacteria	Gammaproteobacteria	2.1023	42.6439	chromosome:NZ_CP018150.1/CP018150.1; plasmid QpRS:NC_010258.1/CP000914.1	-	2	2305	1983	12/27/16	4/6/17	Complete Genome	TIGR	SAMN02435866	GCA_000168875.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/875/GCA_000168875.3_ASM16887v3	-	MSU Goat Q177
Coxiella burnetii CbuK_Q154	434924	PRJNA19139	19139	Proteobacteria	Gammaproteobacteria	2.10238	42.6439	chromosome:NC_011528.1/CP001020.1; plasmid pQpRS_K_Q154:NC_011526.1/CP001021.1	-	2	2302	1982	11/6/08	3/30/17	Complete Genome	Rocky Mountain Laboratories	SAMN02603767	GCA_000019885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/885/GCA_000019885.1_ASM1988v1	19047403	CbuK_Q154
Coxiella burnetii RSA 493	227377	PRJNA41	41	Proteobacteria	Gammaproteobacteria	2.03281	42.6376	chromosome:NC_002971.4/AE016828.3; plasmid pQpH1:NC_004704.2/AE016829.2	-	2	2085	1833	8/28/01	3/2/17	Complete Genome	TIGR	SAMN02603970	GCA_000007765.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/765/GCA_000007765.2_ASM776v2	"1,270,423,219,047,400"	RSA 493
Histophilus somni	731	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.25865	37.2	-	LQGJ01	70	2130	1980	1/4/17	4/6/17	Contig	"University of California, Davis"	SAMN04366583	GCA_001931445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/445/GCA_001931445.1_ASM193144v1	-	3782HS
Coxiella burnetii	777	PRJNA352565	352565	Proteobacteria	Gammaproteobacteria	2.00656	42.6368	chromosome:NZ_CP018005.1/CP018005.1; plasmid pQpH1:NZ_CP018006.1/CP018006.1	-	2	2219	2023	4/25/17	4/27/17	Complete Genome	Bundeswehr	SAMN05982273	GCA_002109345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/345/GCA_002109345.1_ASM210934v1	-	RSA439
Coxiella burnetii	777	PRJNA381644	381644	Proteobacteria	Gammaproteobacteria	2.00654	42.6368	chromosome:NZ_CP020616.1/CP020616.1; plasmid unnamed:NZ_CP020617.1/CP020617.1	-	2	2217	2003	4/18/17	4/21/17	Complete Genome	Portland State University	SAMN06685771	GCA_002094935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/935/GCA_002094935.1_ASM209493v1	-	RSA 439
Shigella sonnei 4822-66	766164	PRJNA49109	49109	Proteobacteria	Gammaproteobacteria	4.71035	51.1	-	AKNE01	91	5214	4124	6/14/12	8/4/17	Contig	Institute for Genome Sciences	SAMN00017228	GCA_000268225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/225/GCA_000268225.1_ASM26822v1	-	4822-66
Bacteroides fragilis CL05T12C13	997881	PRJNA64817	64817	FCB group	Bacteroidetes/Chlorobi group	5.28156	43.5	-	AGXP01	13	4744	4501	6/25/12	5/18/17	Scaffold	Broad Institute	SAMN02463924	GCA_000273135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/135/GCA_000273135.1_Bact_frag_CL05T12C13_V1	-	CL05T12C13
Ruminococcus bicirculans	1160721	PRJEA88543	88543	Terrabacteria group	Firmicutes	2.9685	42.6226	chromosome I:NZ_HF545616.1/HF545616.1; chromosome II:NZ_HF545617.1/HF545617.1	-	2	2786	2668	1/6/14	4/9/17	Complete Genome	Institute of Food Research	SAMEA3139031	GCA_000723465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/465/GCA_000723465.1_Rb803	23919528	80/3
Anaplasma marginale str. Washington Okanogan	1000937	PRJNA64639	64639	Proteobacteria	Alphaproteobacteria	1.38325	46.9	-	AFMW01	332	1136	1013	5/31/11	3/30/17	Contig	University of Florida College of Veterinary Medicine	SAMN02469626	GCA_000215545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/545/GCA_000215545.2_ASM21554v2	21596083	Washington Okanogan
Shigella dysenteriae	622	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.49066	50.8	-	MSJW02	292	4871	4298	1/4/17	3/4/17	Scaffold	University of California at Davis	SAMN03358410	GCA_001932995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/995/GCA_001932995.2_ASM193299v2	-	BCW_4872
Lactobacillus reuteri MM2-3	585517	PRJNA34627	34627	Terrabacteria group	Firmicutes	2.01572	39	-	ACLB01	95	1993	1865	4/20/09	3/30/17	Scaffold	Baylor College of Medicine	SAMN00002242	GCA_000160715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/715/GCA_000160715.1_ASM16071v1	-	MM2-3
Acinetobacter schindleri	108981	PRJNA320745	320745	Proteobacteria	Gammaproteobacteria	3.26805	42.6093	chromosome:NZ_CP015615.1/CP015615.1; plasmid p1AsACE:NZ_CP015616.1/CP015616.1; plasmid p2AsACE:NZ_CP015617.1/CP015617.1; plasmid p3AsACE:NZ_CP015618.1/CP015618.1; plasmid p4AsACE:NZ_CP015619.1/CP015619.1; plasmid p5AsACE:NZ_CP015620.1/CP015620.1; plasmid p6AsACE:NZ_CP015621.1/CP015621.1	-	7	3183	2976	1/26/17	4/6/17	Complete Genome	Centro de Ciencias Genomicas UNAM	SAMN04956557	GCA_001971565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/565/GCA_001971565.1_ASM197156v1	-	ACE
Nostocales cyanobacterium HT-58-2	1940762	PRJNA369278	369278	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.89957	42.6036	chromosome:NZ_CP019636.1/CP019636.1; plasmid pHT582-1:NZ_CP019637.1/CP019637.1; plasmid pHT582-2:NZ_CP019638.1/CP019638.1	-	3	6555	6171	6/2/17	6/5/17	Complete Genome	North Carolina State University	SAMN06283870	GCA_002163975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/975/GCA_002163975.1_ASM216397v1	-	HT-58-2
Bacteroides caecimuris	1796613	PRJNA317592	317592	FCB group	Bacteroidetes/Chlorobi group	4.83993	42.6	chromosome:NZ_CP015401.2/CP015401.2	-	1	4113	3799	7/20/16	4/17/17	Complete Genome	University of Bern	SAMN04621613	GCA_001688725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/725/GCA_001688725.2_ASM168872v2	-	I48
Aerococcus urinae	1376	PRJNA308559	308559	Terrabacteria group	Firmicutes	1.97426	42.6	chromosome:NZ_CP014161.1/CP014161.1	-	1	1801	1715	2/1/16	4/11/17	Complete Genome	"Department of Clinical Microbiology, Slagelse Hospital, Denmark"	SAMN04419113	GCA_001543175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/175/GCA_001543175.1_ASM154317v1	27103727	CCUG36881
Methanosarcina siciliae C2J	1434118	PRJNA230951	230951	Euryarchaeota	Methanomicrobia	5.42789	42.6	chromosome:NZ_CP009508.1/CP009508.1	-	1	4740	4269	4/7/15	4/10/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN03074587	GCA_000970145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/145/GCA_000970145.1_ASM97014v1	-	C2J
Coxiella burnetii Z3055	1293501	PRJEB1438	190093	Proteobacteria	Gammaproteobacteria	1.99546	42.6	chromosome I:NZ_LK937696.1/LK937696.1	-	1	2197	1907	7/13/14	4/2/17	Complete Genome	URMITE	SAMEA2272042	GCA_000367725.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/725/GCA_000367725.3_Z3055	-	Z3055
Methylotenera versatilis 301	666681	PRJNA39983	39983	Proteobacteria	Betaproteobacteria	3.05987	42.6	chromosome:NC_014207.1/CP002056.1	-	1	2842	2762	6/1/10	4/7/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598526	GCA_000093025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/093/025/GCA_000093025.1_ASM9302v1	21622745	301
Methanohalophilus mahii DSM 5219	547558	PRJNA30711	30711	Euryarchaeota	Methanomicrobia	2.01242	42.6	chromosome:NC_014002.1/CP001994.1	-	1	2049	1955	3/31/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598474	GCA_000025865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/865/GCA_000025865.1_ASM2586v1	-	DSM 5219
Corynebacterium jeikeium	38289	PRJNA238244	238244	Terrabacteria group	Actinobacteria	2.30584	62	-	JFCP01	36	2030	1904	8/6/14	4/2/17	Contig	University of Washington	SAMN02641057	GCA_000738305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/305/GCA_000738305.1_Cj38002	25116839	Cj38002
Candidatus Pelagibacter ubique	198252	PRJEB9287	287342	Proteobacteria	Alphaproteobacteria	1.14061	29.1	-	CVSB01	63	1245	1178	6/17/15	4/3/17	Contig	UNIVERSITY OF CALIFORNIA - SAN DIEGO	SAMEA3368553	GCA_001179845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/845/GCA_001179845.1_CLC_assembled_contigs	-	SCGC AAA795-A20
Coxiella burnetii CbuG_Q212	434923	PRJNA19137	19137	Proteobacteria	Gammaproteobacteria	2.00887	42.6	chromosome:NC_011527.1/CP001019.1	-	1	2208	1876	11/6/08	3/30/17	Complete Genome	Rocky Mountain Laboratories	SAMN02603766	GCA_000019865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/865/GCA_000019865.1_ASM1986v1	19047403	CbuG_Q212
Clostridioides difficile M68	699037	PRJNA42463	42463	Terrabacteria group	Firmicutes	4.30832	28.9	chromosome:NC_017175.1/FN668375.1	-	1	4025	3763	3/24/10	3/15/17	Chromosome	Wellcome Trust Sanger Institute	SAMEA3138366	GCA_000210395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/395/GCA_000210395.1_ASM21039v1	20368420	M68
Shigella boydii 08-2675	1212575	PRJNA171082	171082	Proteobacteria	Gammaproteobacteria	4.83283	51.1	-	AMKC01	335	5537	4314	1/6/15	8/4/17	Contig	Institute for Genome Sciences	SAMN03276479	GCA_000815735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/735/GCA_000815735.1_ASM81573v1	-	Aug-75
Streptococcus salivarius SK126	596322	PRJNA34091	34091	Terrabacteria group	Firmicutes	2.12833	40.1	-	ACLO01	101	1955	1866	4/29/09	3/30/17	Contig	J. Craig Venter Institute	SAMN00002153	GCA_000174715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/715/GCA_000174715.1_ASM17471v1	-	SK126
Rhodopseudomonas palustris	1076	PRJNA374948	374948	Proteobacteria	Alphaproteobacteria	5.65163	65.0931	plasmid pRpELI1980:NZ_CM007782.1/CM007782.1	MVOD01	21	5170	5045	3/14/17	8/7/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN06339786	GCA_002026345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/345/GCA_002026345.1_ASM202634v1	28473374	ELI 1980
Marinomonas sp. MWYL1	400668	PRJNA17445	17445	Proteobacteria	Gammaproteobacteria	5.10034	42.6	chromosome:NC_009654.1/CP000749.1	-	1	4653	4479	7/5/07	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598388	GCA_000017285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/285/GCA_000017285.1_ASM1728v1	-	MWYL1
Coxiella burnetii Cb175_Guyana	1294266	PRJEB1459	189521	Proteobacteria	Gammaproteobacteria	2.02695	42.5391	chromosome I:HG825990.3; plasmid plasmid_QpH1:LN833191.1	-	2	-	-	1/30/14	4/13/15	Complete Genome	URMITE	SAMEA3339731	GCA_000359545.5	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/545/GCA_000359545.5_G255_GS	-	Cb175_Guyana
Anoxybacillus sp. B7M1	1490057	PRJNA314079	314079	Terrabacteria group	Firmicutes	3.86906	42.5099	chromosome:NZ_CP015436.1/CP015436.1; plasmid unnamed:NZ_CP015437.1/CP015437.1	-	2	3845	3587	4/29/16	4/12/17	Complete Genome	Los Alamos National Laboratory	SAMN04528789	GCA_001634305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/305/GCA_001634305.1_ASM163430v1	-	b7m1
Haemophilus pittmaniae	249188	PRJEB6403	251923	Proteobacteria	Gammaproteobacteria	2.18135	42.5	chromosome 1:NZ_LT906463.1/LT906463.1	-	1	2061	1946	8/15/17	8/28/17	Complete Genome	SC	SAMEA4384241	GCA_900186995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/995/GCA_900186995.1_50465_A02	-	NCTC13334
Leptospira borgpetersenii str. Brem 328	1049780	PRJNA74067	74067	Spirochaetes	Spirochaetia	3.83381	40.2	-	AHMS02	49	3946	3361	1/24/12	4/1/17	Contig	J. Craig Venter Institute	SAMN02436509	GCA_000243795.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/795/GCA_000243795.3_gls454056v2.0	-	Brem 328
Mycoplasma capricolum subsp. capricolum	40479	PRJNA282481	282481	Terrabacteria group	Tenericutes	0.964668	23.8	-	LBMF01	7	825	745	5/8/15	4/3/17	Scaffold	University of Copenhagen	SAMN03570464	GCA_001005165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/165/GCA_001005165.1_ASM100516v1	26089408	14DL0024
Bartonella bacilliformis VAB9028	1293909	PRJNA189518	189518	Proteobacteria	Alphaproteobacteria	1.41346	38.2	-	ASIX01	7	1246	1141	6/17/14	4/3/17	Scaffold	Broad Institute	SAMN01921142	GCA_000709835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/835/GCA_000709835.1_Bart_baci_VAB9028_V1	-	VAB9028
Anoxybacillus sp. B2M1	1490052	PRJNA314078	314078	Terrabacteria group	Firmicutes	3.81948	42.5	chromosome:NZ_CP015435.1/CP015435.1	-	1	3776	3517	4/29/16	4/12/17	Complete Genome	Los Alamos National Laboratory	SAMN04528779	GCA_001634265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/265/GCA_001634265.1_ASM163426v1	-	b2m1
Campylobacter fetus subsp. venerealis NCTC 10354	983328	PRJNA62521	62521	Proteobacteria	delta/epsilon subdivisions	1.87424	33.2502	chromosome:NZ_CM001228.1/CM001228.1	AFGH01	1	1974	1728	8/1/11	3/30/17	Chromosome	FIOCRUZ -Fundacao OSwaldo Cruz - Instituto Rene Rachou	SAMN02469800	GCA_000222425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/425/GCA_000222425.1_ASM22242v1	21952544	NCTC 10354
Kosmotoga pacifica	1330330	PRJNA256122	256122	Thermotogae	Thermotogae	2.16917	42.5	chromosome:NZ_CP011232.1/CP011232.1	-	1	2086	2017	6/3/15	4/10/17	Complete Genome	"The Third Institute of Oceanography, State Oceanic Administration"	SAMN02940556	GCA_001027025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/025/GCA_001027025.1_ASM102702v1	-	SLHLJ1
Oenococcus oeni AWRIB576	1206775	PRJNA169944	169944	Terrabacteria group	Firmicutes	1.8772	38	-	ALAK01	28	1927	1778	8/9/12	3/23/17	Contig	The Australian Wine Research Institute	SAMN02471124	GCA_000286235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/235/GCA_000286235.1_AWRIB576_v1	22863143	AWRIB576
Streptococcus mitis SK1073	1008452	PRJNA66111	66111	Terrabacteria group	Firmicutes	2.11471	40	-	AFQT01	54	2121	1897	7/6/11	3/30/17	Contig	J. Craig Venter Institute	SAMN00621702	GCA_000220045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/045/GCA_000220045.2_ASM22004v2	-	SK1073
Aeromonas salmonicida	645	PRJNA314146	314146	Proteobacteria	Gammaproteobacteria	4.70149	58.6	-	LUHP01	204	4439	4034	4/14/17	4/21/17	Scaffold	"Institute of hydrobiology, chinese academy of sciences"	SAMN04529550	GCA_002093675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/675/GCA_002093675.1_ASM209367v1	27493011	YK
Methanosarcina mazei Tuc01	1236903	PRJNA176295	176295	Euryarchaeota	Methanomicrobia	3.42795	42.5	chromosome:CP004144.1	-	1	3444	3252	2/22/13	1/31/14	Complete Genome	Rede Paraense de Genômica e Proteômica	SAMN02603746	GCA_000341715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/715/GCA_000341715.1_ASM34171v1	-	Tuc01
Helicobacter mustelae 12198	679897	PRJEA40677	40677	Proteobacteria	delta/epsilon subdivisions	1.5781	42.5	chromosome:NC_013949.1/FN555004.1	-	1	1512	1449	3/11/10	4/7/17	Complete Genome	Wellcome Trust Sanger Institute	SAMEA2272735	GCA_000091985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/091/985/GCA_000091985.1_ASM9198v1	20219135	12198
Coxiella burnetii str. Namibia	1321945	PRJNA197124	197124	Proteobacteria	Gammaproteobacteria	2.10144	42.7393	chromosome:NZ_CP007555.1/CP007555.1; plasmid QpRS:NZ_CP007556.1/CP007556.1	-	2	2203	1923	10/16/14	4/2/17	Chromosome	Coxiella Genome Sequencing Consortium (CGSC)	SAMN02045684	GCA_000767035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/035/GCA_000767035.1_ASM76703v1	25593636	Namibia
Lactobacillus casei LcA	1312920	PRJNA195542	195542	Terrabacteria group	Firmicutes	3.12828	46.2504	chromosome:NZ_CM001861.1/CM001861.1; plasmid pACT:NZ_CM001862.1/CM001862.1	AQPP01	2	3110	2997	5/15/13	8/19/15	Chromosome	University of Helsinki	SAMN01994728	GCA_000400585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/585/GCA_000400585.1_LcA_0213	23815335	LcA
Salinispora arenicola CNY231	1169179	PRJNA175178	175178	Terrabacteria group	Actinobacteria	5.83289	69.6	-	ARHE01	69	5235	4945	4/19/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441009	GCA_000375145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/145/GCA_000375145.1_ASM37514v1	-	CNY231
Lactobacillus helveticus DSM 20075 = CGMCC 1.1877	585520	PRJNA34619	34619	Terrabacteria group	Firmicutes	2.02058	38	-	ACLM01	49	1879	1584	4/27/09	3/30/17	Scaffold	Baylor College of Medicine	SAMN00139430	GCA_000160855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/855/GCA_000160855.1_ASM16085v1	-	DSM 20075
Denitrovibrio acetiphilus DSM 12809	522772	PRJNA29431	29431	Deferribacteres	Deferribacteres	3.22208	42.5	chromosome:NC_013943.1/CP001968.1	-	1	3045	2951	3/11/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598464	GCA_000025725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/725/GCA_000025725.1_ASM2572v1	21304711	DSM 12809
Geobacillus stearothermophilus	1422	PRJNA246673	246673	Terrabacteria group	Firmicutes	3.21443	52.6	-	JQCS01	199	3094	2992	8/25/14	12/1/14	Contig	THE INSTITUTE OF CYTOLOGY AND GENETICS	SAMN02769493	GCA_000743495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/495/GCA_000743495.1_ASM74349v1	25414504	22
Mannheimia succiniciproducens MBEL55E	221988	PRJNA13068	13068	Proteobacteria	Gammaproteobacteria	2.31408	42.5	chromosome:NC_006300.1/AE016827.1	-	1	2187	2062	9/17/04	4/17/17	Complete Genome	"Korea Advanced Institute of Science and Technology, Republic of Korea, Yuseong-gu"	SAMN02603473	GCA_000007745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/745/GCA_000007745.1_ASM774v1	15378067	MBEL55E
Photobacterium damselae subsp. damselae	85581	PRJNA314300	314300	Proteobacteria	Gammaproteobacteria	4.32108	40.6	-	LYBU01	77	3772	3653	8/18/16	4/5/17	Scaffold	Universidade de Santiago de Compostela	SAMN04531897	GCA_001707815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/815/GCA_001707815.1_ASM170781v1	-	LD-07
Borrelia afzelii IPT138	1408885	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.21928	27.9	-	AYCI01	193	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378852	GCA_000502195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/195/GCA_000502195.1_BorAfzIPT138	-	IPT138
Faecalibacterium prausnitzii	853	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.39719	60.8	-	MNSR01	103	1318	1085	12/23/16	12/23/16	Scaffold	None	SAMN05717275	GCA_001916555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/555/GCA_001916555.1_ASM191655v1	27819664	-
Vibrio harveyi VHJR7	1300145	PRJEB1547	201227	Proteobacteria	Gammaproteobacteria	5.91887	44.8	-	CAUO01	70	5599	5390	5/3/13	4/1/17	Contig	UMS	SAMEA2272100	GCA_000442925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/925/GCA_000442925.1_VHJR7_1	-	VHJR7
Bifidobacterium adolescentis	1680	PRJEB10915	297013	Terrabacteria group	Actinobacteria	2.25908	59.3	-	CYYG01	17	1892	1743	10/1/15	4/4/17	Contig	SC	SAMEA3545270	GCA_001406735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/735/GCA_001406735.1_13414_6_46	-	2789STDY5608862
Lactococcus garvieae DCC43	1231377	PRJNA174841	174841	Terrabacteria group	Firmicutes	2.239	37.8	-	AMQS01	67	2245	2137	10/1/12	4/4/17	Contig	Norwegian University of Life Sciences	SAMN02470721	GCA_000300795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/795/GCA_000300795.2_LgDCC43_1.0	23209230	DCC43
Sulfolobus islandicus M.16.2	1132497	PRJNA80889	80889	TACK group	Crenarchaeota	2.64525	35	chromosome:NZ_AHJK01000001.1/AHJK01000001.1	AHJK01	1	2889	2561	1/25/12	3/30/17	Chromosome	University of Illinois	SAMN02471813	GCA_000245095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/095/GCA_000245095.2_ASM24509v2	22363207	M.16.2
Orientia tsutsugamushi str. TA763	1359176	PRJNA212454	212454	Proteobacteria	Alphaproteobacteria	2.4601	30.6	-	LANY01	194	3037	3000	3/27/15	3/27/15	Contig	IGS	SAMN02693774	GCA_000964825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/825/GCA_000964825.1_ASM96482v1	-	TA763
Lactobacillus fermentum	1613	PRJNA378457	378457	Terrabacteria group	Firmicutes	1.9493	52	chromosome Lactobacillus_fermentum_VRI-003:CP020353.1	-	1	1990	1817	3/23/17	3/23/17	Chromosome	smartDNA Pty Ltd	SAMN06546707	GCA_002072085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/085/GCA_002072085.1_ASM207208v1	-	VRI-003
Candidatus Protochlamydia naegleriophila	389348	PRJEB7990	307418	PVC group	Chlamydiae	3.03037	42.4363	chromosome cPNK:NZ_LN879502.1/LN879502.1; plasmid pPNK:NZ_LN879503.1/LN879503.1	-	2	2618	2520	1/3/16	3/22/17	Complete Genome	CHUV-UNIL	SAMEA3539726	GCA_001499655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/655/GCA_001499655.1_PNK1	-	KNic
Porphyromonas gingivalis F0185	1321821	PRJNA198891	198891	FCB group	Bacteroidetes/Chlorobi group	2.24637	48.5	-	AWVC01	113	1956	1830	9/16/13	4/1/17	Scaffold	Washington University	SAMN02436815	GCA_000467955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/955/GCA_000467955.1_ASM46795v1	-	F0185
Candidatus Nanopelagicus hibericus	1884915	PRJNA327031	327031	Terrabacteria group	Actinobacteria	1.22309	42.4	chromosome:NZ_CP016771.1/CP016771.1	-	1	1262	1216	9/8/17	10/2/17	Complete Genome	University of Zurich	SAMN05296519	GCA_002288005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/005/GCA_002288005.1_ASM228800v1	-	-
Ureaplasma urealyticum 2033	1161914	PRJNA89455	89455	Terrabacteria group	Tenericutes	0.803533	25.6	-	AJFX01	13	657	596	3/20/12	3/30/17	Contig	The J. Craig Venter Institute	SAMN02436385	GCA_000255375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/375/GCA_000255375.2_Uurealyticum2033v1.0	-	2033
Methanohalophilus halophilus	2177	PRJNA342410	342410	Euryarchaeota	Methanomicrobia	2.02296	42.4	chromosome:NZ_CP017921.1/CP017921.1	-	1	2064	1987	12/6/16	4/14/17	Complete Genome	UBO	SAMN05756399	GCA_001889405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/405/GCA_001889405.1_ASM188940v1	-	Z-7982
Aliivibrio fischeri	668	PRJNA311605	311605	Proteobacteria	Gammaproteobacteria	4.20176	38.2	-	LTYZ01	48	3867	3763	5/9/16	4/5/17	Contig	MIT	SAMN04519654	GCA_001640455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/455/GCA_001640455.1_ASM164045v1	27128997	MB15A4
Leptospira alstonii	28452	PRJNA315006	315006	Spirochaetes	Spirochaetia	4.59189	42.4	chromosome 1:NZ_CP015217.1/CP015217.1; chromosome 2:NZ_CP015218.1/CP015218.1	-	2	4372	4274	9/16/16	4/13/17	Complete Genome	USDA	SAMN04546715	GCA_001729245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/245/GCA_001729245.1_ASM172924v1	-	GWTS #1
Microcystis panniformis FACHB-1757	1638788	PRJNA277430	277430	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.68684	42.4	chromosome:CP011339.1	-	1	6263	5974	8/11/15	2/23/16	Complete Genome	Wuxi Environmental Monitoring Centre & Southeast University	SAMN03392520	GCA_001264245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/245/GCA_001264245.1_ASM126424v1	-	FACHB-1757
Burkholderia multivorans ATCC BAA-247	985079	PRJNA62777	62777	Proteobacteria	Betaproteobacteria	6.1973	67.1	-	ALIW01	590	6151	5557	8/10/12	7/9/17	Contig	J. Craig Venter Institute	SAMN00255228	GCA_000286555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/555/GCA_000286555.1_gbmulcf1v1.0	23105085	ATCC BAA-247
Borrelia burgdorferi Bol26	445984	PRJNA19837	19837	Spirochaetes	Spirochaetia	1.32143	28.593	plasmid Bol26_cp26:NC_012512.1/CP001568.1; plasmid Bol26_cp32-12:NC_012518.1/CP001565.1; plasmid Bol26_cp32-5:NC_012509.1/CP001572.1; plasmid Bol26_cp32-9:NC_012515.1/CP001570.1; plasmid Bol26_lp17:NC_012506.1/CP001564.1; plasmid Bol26_lp28-3:NC_012497.1/CP001573.1; plasmid Bol26_lp28-4:NC_012499.1/CP001569.1; plasmid Bol26_lp28-9:NC_012494.1/CP001566.1; plasmid Bol26_lp36:NC_012496.1/CP001567.1; plasmid Bol26_lp54:NC_012504.1/CP001571.1	ABCW02	20	1375	1286	6/26/07	3/30/17	Scaffold	J. Craig Venter Institute	SAMN02436166	GCA_000181575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/181/575/GCA_000181575.2_ASM18157v2	-	Bol26
Treponema pallidum subsp. endemicum str. Bosnia A	1155776	PRJNA86663	86663	Spirochaetes	Spirochaetia	1.13765	52.8	chromosome:NZ_CP007548.1/CP007548.1	-	1	1065	1003	1/2/15	4/2/17	Chromosome	The Genome Institute	SAMN03274241	GCA_000813285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/285/GCA_000813285.1_ASM81328v1	25375929	Bosnia A
Rhizobium leguminosarum bv. viciae WSM1455	755176	PRJNA63183	63183	Proteobacteria	Alphaproteobacteria	7.55751	61	-	AJUF01	3	7474	7116	6/5/12	5/19/17	Scaffold	JGI	SAMN02261409	GCA_000271805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/805/GCA_000271805.1_ASM27180v1	-	WSM1455
Ochrobactrum anthropi	529	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	4.12451	55.5	-	DGFY01	294	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453880	GCA_002391935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/935/GCA_002391935.1_ASM239193v1	28894102	-
Rickettsia prowazekii str. Dachau	1105097	PRJNA75005	75005	Proteobacteria	Alphaproteobacteria	1.10905	29	chromosome:NC_017051.1/CP003394.1	-	1	918	851	3/21/12	5/19/17	Chromosome	Los Alamos National Laboratory	SAMN02603545	GCA_000277225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/225/GCA_000277225.1_ASM27722v1	-	Dachau
Clavibacter michiganensis subsp. michiganensis	33013	PRJNA331194	331194	Terrabacteria group	Actinobacteria	3.28481	72.8	-	MDHC01	1	3083	2737	5/19/17	8/4/17	Contig	University of California	SAMN05439581	GCA_002150935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/935/GCA_002150935.1_ASM215093v1	-	CASJ002
Brucella canis BCB018	1210445	PRJNA170703	170703	Proteobacteria	Alphaproteobacteria	3.24732	57.3	-	ALOJ02	170	3290	3098	8/20/12	3/30/17	Contig	Beijing Institute of Disease Control and Prevention	SAMN02469336	GCA_000292185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/185/GCA_000292185.2_ASM29218v2	23144429	BCB018
Dactylococcopsis salina PCC 8305	13035	PRJNA158703	158703	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.78101	42.4	chromosome:NC_019780.1/CP003944.1	-	1	3689	3429	12/7/12	4/17/17	Complete Genome	JGI	SAMN02261331	GCA_000317615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/615/GCA_000317615.1_ASM31761v1	-	PCC 8305
Thermodesulfatator indicus DSM 15286	667014	PRJNA40057	40057	Thermodesulfobacteria	Thermodesulfobacteria	2.32222	42.4	chromosome:NC_015681.1/CP002683.1	-	1	2307	2226	6/10/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02232057	GCA_000217795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/795/GCA_000217795.1_ASM21779v1	22768359	DSM 15286
Bradyrhizobium japonicum USDA 122	1038861	PRJNA162997	162997	Proteobacteria	Alphaproteobacteria	8.97698	64	-	AXAX01	101	8673	8184	9/30/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02441115	GCA_000473025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/025/GCA_000473025.1_ASM47302v1	-	USDA 122
Microcystis aeruginosa PCC 9809	1160285	PRJEA88199	88199	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.01102	42.8	-	CAIO01	303	5023	4497	5/28/12	3/31/17	Scaffold	Genoscope CEA	SAMEA2272447	GCA_000312265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/265/GCA_000312265.1_ASM31226v1	-	PCC 9809
Methanobrevibacter smithii TS147B	911124	PRJNA59665	59665	Euryarchaeota	Methanobacteria	1.96506	30.4	-	AELS01	40	1899	1784	2/17/11	3/30/17	Contig	Washington University in St.Louis	SAMN02436668	GCA_000189955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/955/GCA_000189955.2_ASM18995v2	21317366	TS147B
Streptococcus dysgalactiae subsp. equisimilis	119602	PRJNA279308	279308	Terrabacteria group	Firmicutes	2.20776	39.3	-	LAKV01	91	2184	2045	4/8/15	4/3/17	Contig	MD Anderson	SAMN03445737	GCA_000970985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/985/GCA_000970985.1_ASM97098v1	26430051	UT-5345
Borrelia garinii IPT124	1408847	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.21805	28	-	AYAW01	212	1200	647	12/3/13	4/2/17	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378814	GCA_000501175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/175/GCA_000501175.1_BorGarIPT124	-	IPT124
Streptococcus mutans TCI-110	1074115	PRJNA71981	71981	Terrabacteria group	Firmicutes	1.80911	37	-	AGKI01	135	1838	1724	10/6/11	3/22/17	Contig	JCVI	SAMN02436598	GCA_000228805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/805/GCA_000228805.2_SMUT4-NEX_4-110	-	TCI-110
Vulcanisaeta moutnovskia 768-28	985053	PRJNA63027	63027	TACK group	Crenarchaeota	2.29898	42.4	chromosome:NC_015151.1/CP002529.1	-	1	2450	2357	2/22/11	4/17/17	Complete Genome	Centre Bioengineering RAS	SAMN02603092	GCA_000190315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/315/GCA_000190315.1_ASM19031v1	21398550	768-28
Psychrobacter sp. G	571800	PRJNA209108	209108	Proteobacteria	Gammaproteobacteria	3.114	42.3764	chromosome:NC_021661.1/CP006265.1; plasmid PsyG_26:NC_021668.1/CP006266.1; plasmid PsyG_3:NC_021669.1/CP006268.1; plasmid PsyG_4:NC_021662.1/CP006267.1	-	4	2631	2535	7/5/13	4/17/17	Complete Genome	"The First Institute of Oceanography, SOA"	SAMN02603914	GCA_000418305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/305/GCA_000418305.1_ASM41830v1	24051316	G
Jeotgalibacillus malaysiensis	1508404	PRJNA253510	253510	Terrabacteria group	Firmicutes	4.11951	42.3633	chromosome:NZ_CP009416.1/CP009416.1; plasmid unnamed:NZ_CP009417.1/CP009417.1	-	2	4412	4213	1/14/15	4/10/17	Complete Genome	Universiti Teknologi Malaysia	SAMN02870886	GCA_000818095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/095/GCA_000818095.1_ASM81809v1	-	D5
Coxiella burnetii Dugway 5J108-111	434922	PRJNA16721	16721	Proteobacteria	Gammaproteobacteria	2.21294	42.3363	chromosome:NC_009727.1/CP000733.1; plasmid pQpDG:NC_009726.1/CP000735.1	-	2	2358	2094	8/1/07	3/30/17	Complete Genome	J. Craig Venter Institute	SAMN02603436	GCA_000017105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/105/GCA_000017105.1_ASM1710v1	19047403	Dugway 5J108-111
Enterococcus gallinarum	1353	PRJNA231221	231221	Terrabacteria group	Firmicutes	3.82135	42.3216	chromosome:NZ_CP014067.1/CP014067.1; plasmid unnamed:NZ_CP014068.1/CP014068.1	-	2	3638	3395	2/11/16	4/11/17	Complete Genome	US Food and Drug Administration 	SAMN03996308	GCA_001558875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/875/GCA_001558875.1_ASM155887v1	-	FDAARGOS_163
Rhizobium etli IE4771	526946	PRJNA29563	29563	Proteobacteria	Alphaproteobacteria	3.98902	60.9	-	ABRC01	2886	-	-	6/17/08	1/8/14	Contig	"Centro de Ciencias Genomicas, Universidad Nacional Autonoma de Mexico"	SAMN02469453	GCA_000172775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/775/GCA_000172775.1_ASM17277v1	-	IE4771
Aggregatibacter aphrophilus	732	PRJNA282954	282954	Proteobacteria	Gammaproteobacteria	2.41443	42.3	chromosome:NZ_CP012067.1/CP012067.1	-	1	2257	2130	8/6/15	4/3/17	Complete Genome	The Forsyth Institute	SAMN03704034	GCA_001262035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/035/GCA_001262035.1_ASM126203v1	-	W10433
Comamonas testosteroni	285	PRJNA217890	217890	Proteobacteria	Betaproteobacteria	5.35714	61.1	-	AWOU01	91	4877	4692	10/1/14	4/2/17	Contig	Huazhong Agricultural University	SAMN02768807	GCA_000761255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/255/GCA_000761255.1_CJC12v1	-	JC12
Bacillus mycoides	1405	PRJNA309386	309386	Terrabacteria group	Firmicutes	5.91833	35.1	-	LRPH01	121	6152	5707	1/27/16	4/4/17	Contig	PharmaSea	SAMN04432437	GCA_001541985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/985/GCA_001541985.1_ASM154198v1	27056214	PE8-15
Yersinia frederiksenii	29484	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.82495	47.6	-	CQEN01	52	4373	4202	3/23/15	4/4/17	Scaffold	SC	SAMEA859901	GCA_001135485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/485/GCA_001135485.1_5139_5_6	-	FE80988
Yersinia kristensenii	28152	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.53766	47.5	-	CQEO01	49	4202	4018	3/23/15	4/3/17	Scaffold	SC	SAMEA859932	GCA_001144805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/805/GCA_001144805.1_4821_5_12	-	FCF580
Bifidobacterium bifidum IPLA 20015	1207543	PRJNA170147	170147	Terrabacteria group	Actinobacteria	2.13833	62.7	-	AMPM01	571	1995	1548	9/28/12	3/30/17	Contig	IPLA-CSIC	SAMN02470078	GCA_000300215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/215/GCA_000300215.1_ASM30021v1	-	IPLA 20015
Alteromonas macleodii	28108	PRJNA338983	338983	Proteobacteria	Gammaproteobacteria	5.24997	44.6	-	MIPW01	74	4717	4557	9/30/16	4/5/17	Contig	US Naval Research Lab	SAMN05578452	GCA_001750305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/305/GCA_001750305.1_ASM175030v1	-	CUKW
Micrococcus luteus	1270	PRJNA299404	299404	Terrabacteria group	Actinobacteria	2.40482	73.2	-	LSKC01	362	2253	2052	2/10/16	4/4/17	Contig	Georgia Institute of Technology	SAMN04299479	GCA_001556945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/945/GCA_001556945.1_ASM155694v1	-	CCH3-E2
Streptococcus equi subsp. zooepidemicus Sz12is	1381083	PRJNA214018	214018	Terrabacteria group	Firmicutes	2.09072	41.5	-	JAUD01	85	1987	1865	2/17/15	3/25/17	Contig	Copenhagen University	SAMN02298716	GCA_000876305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/305/GCA_000876305.1_ASM87630v1	-	Sz12is
Helicobacter pullorum	35818	PRJNA326719	326719	Proteobacteria	delta/epsilon subdivisions	1.73199	34.5	-	MAPC01	127	1714	1582	8/4/16	4/5/17	Contig	University of Hyderabad	SAMN05291443	GCA_001698755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/755/GCA_001698755.1_ASM169875v1	-	NAP5W19
Zymomonas mobilis	542	PRJNA310807	310807	Proteobacteria	Alphaproteobacteria	2.20072	46.1	-	LSFP01	30	1975	1888	2/17/16	4/4/17	Scaffold	Northeastern University of China	SAMN04455785	GCA_001563365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/365/GCA_001563365.1_ASM156336v1	27056218	ATCC 31823
Haemophilus parasuis 12939	1275968	PRJNA184681	184681	Proteobacteria	Gammaproteobacteria	1.95303	39.8	-	APBW01	76	1955	1694	8/7/13	4/1/17	Contig	Iowa State University	SAMN02470072	GCA_000444605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/605/GCA_000444605.1_ASM44460v1	24051319	12939
[Clostridium] stercorarium subsp. stercorarium DSM 8532	1121335	PRJNA180992	180992	Terrabacteria group	Firmicutes	2.97001	42.3	chromosome:NC_020887.2/CP003992.2	-	1	2635	2530	4/1/13	9/10/17	Complete Genome	University of Manitoba	SAMN02604195	GCA_000349885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/885/GCA_000349885.2_ASM34988v2	24998381	DSM 8532
Pyrococcus sp. ST04	1183377	PRJNA162927	162927	Euryarchaeota	Thermococci	1.73689	42.3	chromosome:NC_017946.1/CP003534.1	-	1	1887	1789	5/22/12	4/7/17	Complete Genome	Kyung Hee University	SAMN02603491	GCA_000263735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/735/GCA_000263735.1_ASM26373v1	22843576	ST04
Glaciecola nitratireducens FR1064	1085623	PRJNA73073	73073	Proteobacteria	Gammaproteobacteria	4.13423	42.3	chromosome:NC_016041.1/CP003060.1	-	1	3542	3449	9/28/11	5/18/17	Complete Genome	Shandong University	SAMN02603857	GCA_000226565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/565/GCA_000226565.1_ASM22656v1	22123761	FR1064
Vibrio splendidus	29497	PRJNA302718	302718	Proteobacteria	Gammaproteobacteria	5.57925	44.5	-	LNRH01	57	4952	4756	2/10/16	4/4/17	Contig	University of Cambridge	SAMN04279310	GCA_001558025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/025/GCA_001558025.1_ASM155802v1	-	MARo
Microcystis aeruginosa NIES-843	449447	PRJDA27835	27835	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.84279	42.3	chromosome:NC_010296.1/AP009552.1	-	1	5867	5190	1/25/08	3/29/17	Complete Genome	Kazusa DNA Research Institute	SAMD00060936	GCA_000010625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/625/GCA_000010625.1_ASM1062v1	18192279	NIES-843
Enterococcus casseliflavus	37734	PRJNA342049	342049	Terrabacteria group	Firmicutes	3.48338	42.6	-	MJEF01	85	3450	3247	4/3/17	4/5/17	Contig	Lethbridge Research Centre	SAMN05735029	GCA_002077515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/515/GCA_002077515.1_ASM207751v1	28270110	F1129E 107
Enterococcus gallinarum	1353	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.90737	40.7	-	DFXL01	17	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452937	GCA_002383155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/155/GCA_002383155.1_ASM238315v1	28894102	-
Bacillus megaterium NBRC 15308 = ATCC 14581	1348623	PRJNA236746	236746	Terrabacteria group	Firmicutes	5.72707	37.7	-	JJMH01	78	5870	5616	10/6/14	4/2/17	Contig	Health Canada	SAMN02712415	GCA_000764085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/085/GCA_000764085.1_Bm14581-Illumina	25395629	ATCC 14581
Clostridium sporogenes	1509	PRJNA266242	266242	Terrabacteria group	Firmicutes	4.15343	28	-	LAGF01	486	3881	2262	3/27/15	4/3/17	Contig	Centers for Disease Control and Prevention	SAMN03169467	GCA_000965425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/425/GCA_000965425.1_ASM96542v1	-	CDC23284
Desulfotomaculum reducens MI-1	349161	PRJNA13424	13424	Terrabacteria group	Firmicutes	3.6081	42.3	chromosome:NC_009253.1/CP000612.1	-	1	3571	3406	3/24/07	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598304	GCA_000016165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/165/GCA_000016165.1_ASM1616v1	-	MI-1
Dorea longicatena	88431	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.94522	41.4	-	DGXC01	201	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455945	GCA_002395475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/475/GCA_002395475.1_ASM239547v1	28894102	-
Providencia stuartii	588	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.49184	41.4	-	NJEY01	2	4196	3808	6/23/17	6/26/17	Contig	US Food and Drug Administration 	SAMN06173307	GCA_002206175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/175/GCA_002206175.1_ASM220617v1	-	FDAARGOS_294
Bacteroides ovatus	28116	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	6.63907	42	-	CZBG01	57	5183	5005	10/1/15	4/4/17	Contig	SC	SAMEA3545406	GCA_001405735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/735/GCA_001405735.1_14207_7_66	-	2789STDY5834943
Bacteroides uniformis	820	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	4.94319	46.3	-	CZAO01	67	4273	4077	10/1/15	4/4/17	Contig	SC	SAMEA3545361	GCA_001405595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/595/GCA_001405595.1_14207_7_21	-	2789STDY5834898
Treponema denticola ATCC 33520	999428	PRJNA64907	64907	Spirochaetes	Spirochaetia	2.88689	37.9	-	AGDS01	2	2744	2588	2/7/13	4/1/17	Scaffold	Broad Institute	SAMN02596718	GCA_000338615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/338/615/GCA_000338615.1_Trep_dent_ATCC_33520_V1	-	ATCC 33520
Bordetella bronchiseptica 980-2	1458264	PRJNA237089	237089	Proteobacteria	Betaproteobacteria	5.25881	68.1	-	JHOK01	70	5030	4811	4/29/14	4/2/17	Contig	JCVI	SAMN02614572	GCA_000648985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/985/GCA_000648985.1_gbb68v01	-	980-2
Candidatus Nitrosoglobus terrae	1630141	PRJDB3593	362779	Proteobacteria	Gammaproteobacteria	2.01831	42.2955	chromosome:AP014836.1; plasmid pTAO100:AP014837.1	-	2	1894	1844	1/20/17	4/26/17	Complete Genome	National Institute for Agro-Environmental Sciences	SAMD00027389	GCA_002356115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/115/GCA_002356115.1_ASM235611v1	-	TAO100
Mesorhizobium loti	381	PRJNA325572	325572	Proteobacteria	Alphaproteobacteria	6.54499	62.9	-	LZTJ01	36	6441	6142	6/20/16	4/5/17	Contig	Curtin University	SAMN05240960	GCA_001671485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/671/485/GCA_001671485.1_ASM167148v1	-	R7ANS::ICEMlSym2042
Bacillus muralis	264697	PRJNA283689	283689	Terrabacteria group	Firmicutes	5.00702	42.2722	chromosome:NZ_CP017080.1/CP017080.1; plasmid pG25-68:NZ_CP017081.1/CP017081.1	-	2	4909	4730	8/31/16	4/13/17	Complete Genome	Institute of Life Sciences and Technology	SAMN03654038	GCA_001645685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/685/GCA_001645685.2_ASM164568v2	-	G25-68
Psychrobacter cryohalolentis	330922	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	3.10862	42.247	chromosome:NZ_CP022043.1/CP022043.1; plasmid unnamed1:NZ_CP022042.1/CP022042.1	-	2	2610	2514	6/27/17	6/29/17	Complete Genome	US Food and Drug Administration 	SAMN06173321	GCA_002208765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/765/GCA_002208765.1_ASM220876v1	-	FDAARGOS_308
Streptococcus gordonii	1302	PRJNA280670	280670	Terrabacteria group	Firmicutes	2.15186	40.6	-	LAWF01	41	2082	2004	3/11/16	4/5/17	Contig	University of Malaya	SAMN03480641	GCA_001588615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/615/GCA_001588615.1_ASM158861v1	-	FSS8
Ruminococcus albus	1264	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.15184	44.4	-	DGIJ01	315	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456338	GCA_002393105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/105/GCA_002393105.1_ASM239310v1	28894102	-
Psychrobacter cryohalolentis K5	335284	PRJNA13920	13920	Proteobacteria	Gammaproteobacteria	3.1011	42.2468	chromosome:NC_007969.1/CP000323.1; plasmid 1:NC_007968.1/CP000324.1	-	2	2597	2505	4/18/06	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02598327	GCA_000013905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/905/GCA_000013905.1_ASM1390v1	-	K5
Enterococcus gallinarum	1353	PRJNA231221	231221	Terrabacteria group	Firmicutes	3.54929	42.238	chromosome:CP023515.1; plasmid unnamed1:CP023514.1; plasmid unnamed2:CP023513.1	-	3	3494	3283	9/28/17	9/28/17	Complete Genome	US Food and Drug Administration 	SAMN07312419	GCA_002393265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/265/GCA_002393265.1_ASM239326v1	-	FDAARGOS_375
Lactobacillus gasseri 2016	1346615	PRJNA208361	208361	Terrabacteria group	Firmicutes	1.87952	35.3	-	AUUE01	29	1874	1648	7/25/13	4/1/17	Contig	Kingston University	SAMN02470136	GCA_000439915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/915/GCA_000439915.1_L.gasseri_2016_V1	23969051	2016
Anoxybacillus flavithermus	33934	PRJNA386099	386099	Terrabacteria group	Firmicutes	2.83012	42.2088	chromosome:NZ_CP021838.1/CP021838.1; plasmid unnamed:NZ_CP021839.1/CP021839.1	-	2	3013	2676	6/16/17	6/21/17	Complete Genome	"University of Zurich, Vetsuisse Faculty"	SAMN06925341	GCA_002197485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/485/GCA_002197485.1_ASM219748v1	-	52-1A
Chlamydia muridarum	83560	PRJNA244649	244649	PVC group	Chlamydiae	1.08045	40.3	-	JNON01	2	960	908	6/10/14	4/2/17	Contig	IGS	SAMN02808327	GCA_000700865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/865/GCA_000700865.1_cmvar002	24961692	Var002
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	3.982	41.6	-	JJPO01	159	3437	3262	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708987	GCA_000979015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/015/GCA_000979015.1_gtlEnvA5udCFS	25756680	3.H.A.2.1
Anaplasma phagocytophilum str. NCH-1	1359161	PRJNA212448	212448	Proteobacteria	Alphaproteobacteria	1.50275	41.6	-	LANT01	15	1226	1062	3/27/15	4/3/17	Contig	IGS	SAMN02585076	GCA_000964725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/725/GCA_000964725.1_ASM96472v1	-	NCH-1
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.15779	39.9	-	FPMG01	2	1055	961	5/10/17	5/24/17	Contig	WTSI	SAMEA1094350	GCA_900118625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/625/GCA_900118625.1_7067_6_53	-	99DC2
Salmonella bongori serovar 44:z39:-	1967586	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.31539	51.4	-	MXOF01	36	4214	3946	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367600	GCA_002037625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/625/GCA_002037625.1_ASM203762v1	-	BCW_1554
Bacteroides thetaiotaomicron	818	PRJNA345415	345415	FCB group	Bacteroidetes/Chlorobi group	6.55496	42.9	-	MKXM01	102	5308	5062	10/21/16	4/5/17	Contig	Odense University Hospital	SAMN05862073	GCA_001816245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/245/GCA_001816245.1_ASM181624v1	-	14-106904-2
Streptococcus uberis C5072	1450182	PRJNA234018	234018	Terrabacteria group	Firmicutes	1.9062	36.5	-	JATI01	19	1912	1842	4/22/15	4/3/17	Contig	University of Nottingham	SAMN02570390	GCA_000975485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/975/485/GCA_000975485.1_ASM97548v1	25898893	C5072
Bartonella quintana JK 68	1134503	PRJNA81679	81679	Proteobacteria	Alphaproteobacteria	1.61287	39.1	-	AHPD01	5	1400	1203	6/12/14	4/10/17	Scaffold	Broad Institute	SAMN00778962	GCA_000708945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/945/GCA_000708945.1_Bart_quin_JK_68_V1	-	JK 68
Clostridium tetani	1513	PRJEB19565	376368	Terrabacteria group	Firmicutes	2.79122	28.6	-	FUWT01	33	2769	2644	3/4/17	3/10/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745112	GCA_900167265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/265/GCA_900167265.1_IMG-taxon_2585428146_annotated_assembly	-	ATCC 19406
Lactobacillus acidophilus DSM 20242	1226679	PRJEB1533	200914	Terrabacteria group	Firmicutes	2.04786	34.7	-	CBLT01	21	2010	1879	7/7/13	4/1/17	Contig	INRA STLO	SAMEA2272474	GCA_000442825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/825/GCA_000442825.1_LaDSM20242V1	-	DSM 20242
Bartonella henselae str. Houston-1	283166	PRJNA231221	231221	Proteobacteria	Alphaproteobacteria	2.01471	38.3	-	LRIJ01	2	1704	1532	1/22/16	1/24/16	Contig	US Food and Drug Administration 	SAMN03996256	GCA_001525625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/625/GCA_001525625.1_ASM152562v1	-	Houston-1
Mucilaginibacter sp. BJC16-A31	1234841	PRJNA397720	397720	FCB group	Bacteroidetes/Chlorobi group	5.30134	42.2	chromosome:NZ_CP022743.1/CP022743.1	-	1	4613	4517	8/16/17	8/17/17	Complete Genome	Henan University of Science and Technology	SAMN07485681	GCA_002257585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/585/GCA_002257585.1_ASM225758v1	-	BJC16-A31
[Clostridium] stercorarium subsp. thermolacticum DSM 2910	1121336	PRJNA208365	208365	Terrabacteria group	Firmicutes	3.03562	42.2	chromosome:NZ_CP014672.1/CP014672.1	-	1	2677	2562	8/2/16	4/13/17	Complete Genome	University of Manitoba	SAMN04539466	GCA_001697245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/245/GCA_001697245.1_ASM169724v1	-	DSM 2910
Streptococcus sp. A12	1759399	PRJNA302800	302800	Terrabacteria group	Firmicutes	1.87434	42.2	chromosome:NZ_CP013651.1/CP013651.1	-	1	1854	1739	3/11/16	4/12/17	Complete Genome	University of Florida	SAMN04287214	GCA_001587175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/175/GCA_001587175.1_ASM158717v1	26826230	A12
Lactobacillus brevis subsp. gravesensis ATCC 27305	525310	PRJNA31481	31481	Terrabacteria group	Firmicutes	3.14466	40.2	-	ACGG01	106	2914	2757	2/12/09	3/30/17	Scaffold	Baylor College of Medicine	SAMN00001468	GCA_000159175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/175/GCA_000159175.1_ASM15917v1	-	ATCC 27305
Pediococcus pentosaceus	1255	PRJNA310676	310676	Terrabacteria group	Firmicutes	1.93423	37.2	-	LSFE01	54	1953	1686	3/16/16	4/5/17	Contig	Kyunghee University	SAMN04453291	GCA_001593095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/095/GCA_001593095.1_ASM159309v1	-	FBL2
Aggregatibacter aphrophilus NJ8700	634176	PRJNA258126	258126	Proteobacteria	Gammaproteobacteria	2.31326	42.2	chromosome:NZ_CP009230.1/CP009230.1	-	1	2247	2110	7/30/15	4/3/17	Complete Genome	"Bumgarner laboratory, Department of Microbiology, University of Washington"	SAMN02988840	GCA_001188835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/835/GCA_001188835.1_ASM118883v1	-	NJ8700
Oleispira antarctica RB-8	698738	PRJEA42413	42413	Proteobacteria	Gammaproteobacteria	4.40638	42.2	chromosome:NZ_FO203512.1/FO203512.1	-	1	3987	3866	5/31/13	4/17/17	Complete Genome	Max Planck Institute for Molecular Genetics	SAMEA4532328	GCA_000967895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/895/GCA_000967895.1_ASM96789v1	23877221	-
[Clostridium] stercorarium subsp. stercorarium DSM 8532	1121335	PRJNA181307	181307	Terrabacteria group	Firmicutes	2.97438	42.2	chromosome:NC_020134.1/CP004044.1	-	1	2641	2538	1/17/13	9/10/17	Complete Genome	"Georg-August-University-Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02603280	GCA_000331995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/995/GCA_000331995.1_ASM33199v1	23516204	DSM 8532
Chromobacterium violaceum	536	PRJNA369804	369804	Proteobacteria	Betaproteobacteria	4.72544	64.7	-	MUKW01	53	4376	4224	4/6/17	4/8/17	Contig	Centers for Disease Control and Prevention	SAMN06294335	GCA_002081875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/875/GCA_002081875.1_ASM208187v1	-	H5524
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.69352	67.4	-	LOWL01	64	6048	5776	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449232	GCA_001523705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/705/GCA_001523705.1_ASM152370v1	-	FL-2-3-10-S3-D0
Calothrix sp. PCC 7507	99598	PRJNA158683	158683	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.02322	42.2	chromosome:NC_019682.1/CP003943.1	-	1	6120	5836	12/4/12	5/18/17	Complete Genome	JGI	SAMN02261328	GCA_000316575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/575/GCA_000316575.1_ASM31657v1	-	PCC 7507
Staphylococcus haemolyticus	1283	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.48427	32.7	-	JVPA01	120	2424	2342	7/10/15	3/26/17	Contig	University of Washington	SAMN03197424	GCA_001071875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/875/GCA_001071875.1_ASM107187v1	26230489	235_SHAE
Photorhabdus luminescens	29488	PRJEB16120	348591	Proteobacteria	Gammaproteobacteria	5.29387	42.6	-	FMWJ01	70	4625	4286	10/17/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02982990	GCA_900102985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/985/GCA_900102985.1_IMG-taxon_2597490348_annotated_assembly	-	ATCC 29999
Moorella thermoacetica	1525	PRJNA330912	330912	Terrabacteria group	Firmicutes	2.6171	55.8	-	MDDB01	33	2653	2546	11/10/16	4/5/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05430239	GCA_001875285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/285/GCA_001875285.1_ASM187528v1	-	DSM 6867
Brucella ovis IntaBari-1993-758	1293920	PRJNA189532	189532	Proteobacteria	Alphaproteobacteria	3.31046	57.2	-	AQIO01	24	3429	3049	4/16/13	4/1/17	Contig	Broad Institute	SAMN01921153	GCA_000366005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/005/GCA_000366005.1_Bruc_ovis_IntaBari-1993-758_V1	-	IntaBari-1993-758
Campylobacter lari	201	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.49129	29.6	-	MJWK01	21	1541	1469	10/4/16	4/5/17	Scaffold	University of California at Davis	SAMN03357963	GCA_001762205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/205/GCA_001762205.1_BCW_4217	-	BCW_4217
Mycoplasma bovis	28903	PRJNA306895	306895	Terrabacteria group	Tenericutes	0.946659	29.3	-	LQEY01	74	815	734	1/4/17	4/6/17	Contig	"University of California, Davis"	SAMN04366546	GCA_001929825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/825/GCA_001929825.1_ASM192982v1	-	2887MB
Proteus mirabilis ATCC 29906	525369	PRJNA31523	31523	Proteobacteria	Gammaproteobacteria	4.0271	38.7	-	ACLE01	54	3691	3511	4/21/09	3/30/17	Scaffold	BCM	SAMN00001486	GCA_000160755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/755/GCA_000160755.1_ASM16075v1	-	ATCC 29906
Aggregatibacter aphrophilus NJ8700	634176	PRJNA36579	36579	Proteobacteria	Gammaproteobacteria	2.31304	42.2	chromosome:NC_012913.1/CP001607.1	-	1	2254	2068	7/2/09	3/30/17	Complete Genome	American Museum of Natural History	SAMN02602980	GCA_000022985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/985/GCA_000022985.1_ASM2298v1	19447908	NJ8700
Cronobacter sakazakii	28141	PRJNA251797	251797	Proteobacteria	Gammaproteobacteria	4.55966	56.8	-	JOLH01	200	4475	4172	10/9/15	4/4/17	Scaffold	"Nottingham Trent University, UK"	SAMN02840765	GCA_001309045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/045/GCA_001309045.1_ASM130904v1	26438044	706
Klebsiella oxytoca MGH 42	1328431	PRJNA201957	201957	Proteobacteria	Gammaproteobacteria	5.96899	55	-	AYIW01	7	5659	5439	10/30/13	2/21/17	Scaffold	Broad Institute	SAMN02138582	GCA_000492815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/815/GCA_000492815.1_Kleb_oxyt_MGH_42_V1	-	MGH 42
Erwinia amylovora CFBP 1232	1255307	PRJEB604	196608	Proteobacteria	Gammaproteobacteria	3.79553	53.5747	plasmid pEA29:NC_020918.1/HF560650.1	CAPB01	43	3591	3390	4/8/13	4/1/17	Contig	CeBiTec	SAMEA2271944	GCA_000367625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/625/GCA_000367625.2_ASM36762v2	-	type strain: CFBP 1232
Clostridium beijerinckii	1520	PRJNA322806	322806	Terrabacteria group	Firmicutes	5.96833	29.6	-	LZZE01	242	5239	5026	2/23/17	2/25/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05170527	GCA_002006285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/285/GCA_002006285.1_ASM200628v1	-	NCP 260
Streptomyces scabiei	1930	PRJNA309703	309703	Terrabacteria group	Actinobacteria	9.02306	70.9	-	LSZY01	1173	8594	7307	3/3/16	3/13/17	Contig	University of Florida	SAMN04438373	GCA_001579685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/685/GCA_001579685.1_ASM157968v1	-	96-06
Lactobacillus salivarius ACS-116-V-Col5a	768728	PRJNA49443	49443	Terrabacteria group	Firmicutes	2.0446	32.7	-	AEBA01	154	2088	1870	7/19/10	3/30/17	Contig	J. Craig Venter Institute	SAMN00017035	GCA_000179475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/475/GCA_000179475.1_ASM17947v1	-	ACS-116-V-Col5a
Citrobacter koseri	545	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.98473	53.6	-	LORR01	13	4720	4148	12/21/15	12/21/15	Contig	US Food and Drug Administration 	SAMN03996311	GCA_001471775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/775/GCA_001471775.1_ASM147177v1	-	FDAARGOS_164
Bacillus clausii	79880	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.44475	44.6	-	NPBN01	146	4417	4271	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372685	GCA_002272085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/085/GCA_002272085.1_assembly-7520-2_v1	-	7520-2
Gluconobacter oxydans	442	PRJNA288385	288385	Proteobacteria	Alphaproteobacteria	2.7548	60.9	-	LHZL01	171	2628	2423	3/7/16	4/5/17	Contig	Ghent University	SAMN03799282	GCA_001580815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/815/GCA_001580815.1_ASM158081v1	-	LMG 1406
Bacteroides vulgatus	821	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	4.97227	42.2	-	CZBK01	67	4241	3992	10/1/15	4/4/17	Contig	SC	SAMEA3545407	GCA_001406315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/315/GCA_001406315.1_14207_7_67	-	2789STDY5834944
Agrobacterium vitis	373	PRJNA328312	328312	Proteobacteria	Alphaproteobacteria	6.00336	57.5	-	MBFA01	89	5486	5238	11/1/16	4/5/17	Contig	Monash University Malaysia	SAMN05369604	GCA_001860205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/205/GCA_001860205.1_ASM186020v1	-	RF2/1
Xenorhabdus bovienii str. kraussei Becker Underwood	1398204	PRJEB4325	255482	Proteobacteria	Gammaproteobacteria	4.67488	44.7	-	CBSZ01	417	4311	3909	7/17/14	4/2/17	Scaffold	UWM	SAMEA3139096	GCA_000736695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/695/GCA_000736695.1_XBKBD_3526_PRJEB4325	-	kraussei Becker Underwood
Moraxella catarrhalis BC8	857574	PRJNA49921	49921	Proteobacteria	Gammaproteobacteria	1.91254	41.6	-	AERJ01	32	1789	1676	3/22/11	3/30/17	Contig	Center for Genomic Sciences	SAMN02393791	GCA_000193025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/025/GCA_000193025.2_ASM19302v2	21269504	BC8
Neisseria lactamica	486	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	2.15403	49.8	-	JVLA01	59	2073	1966	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197528	GCA_001064605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/605/GCA_001064605.1_ASM106460v1	26230489	338.rep1_NLAC
Bacteroides vulgatus ATCC 8482	435590	PRJNA13378	13378	FCB group	Bacteroidetes/Chlorobi group	5.16319	42.2	chromosome:NC_009614.1/CP000139.1	-	1	4333	4077	6/27/07	5/18/17	Complete Genome	Washington University (WashU)	SAMN02604309	GCA_000012825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/825/GCA_000012825.1_ASM1282v1	17579514	ATCC 8482
Photorhabdus asymbiotica	291112	PRJEA30577	30577	Proteobacteria	Gammaproteobacteria	5.09414	42.1902	chromosome:NC_012962.1/FM162591.1; plasmid pPAU1:NC_012961.1/FM162592.1	-	2	4570	4298	7/14/09	4/7/17	Complete Genome	University of Bath	SAMEA2272210	GCA_000196475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/475/GCA_000196475.1_ASM19647v1	19583835	-
Parabacteroides distasonis	823	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	5.02919	45	-	CYYK01	29	4232	4014	10/1/15	6/12/17	Contig	SC	SAMEA3545231	GCA_001405775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/775/GCA_001405775.1_13414_6_6	-	2789STDY5608822
Photobacterium angustum	661	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.85694	39.5	-	JZSX01	57	4370	4011	3/10/15	4/3/17	Contig	FDA/CFSAN	SAMN03295472	GCA_000950275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/275/GCA_000950275.1_CFSAN029424_01.0	25931609	GCSL-A2-4
Bacillus weihenstephanensis	86662	PRJNA318343	318343	Terrabacteria group	Firmicutes	5.62537	35.2	-	LXLX01	105	5934	5453	10/12/16	4/5/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04819588	GCA_001757905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/905/GCA_001757905.1_ASM175790v1	-	GOE11
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.21421	36.7	-	LPRE01	3	2325	2172	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305138	GCA_001559965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/965/GCA_001559965.1_GG12_C01_03	-	GG12-C01-03
Streptococcus sanguinis SK1057	888821	PRJNA53183	53183	Terrabacteria group	Firmicutes	2.34878	43.3	-	AFBA01	5	2342	2258	4/4/11	3/30/17	Scaffold	Baylor College of Medicine	SAMN00253315	GCA_000194965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/965/GCA_000194965.1_ASM19496v1	-	SK1057
Staphylococcus saprophyticus	29385	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.57465	33	-	LNPK01	33	2509	2344	9/28/16	4/5/17	Contig	Tufts University	SAMN04244260	GCA_001747585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/585/GCA_001747585.1_ASM174758v1	-	429A
Vibrio sp. S234-5	1616781	PRJNA275538	275538	Proteobacteria	Gammaproteobacteria	4.90557	48	-	JZAM01	475	4671	4347	3/23/15	4/10/17	Scaffold	Health Canada	SAMN03349613	GCA_000960595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/595/GCA_000960595.1_ASM96059v1	-	S234-5
Bacillus coagulans XZL9	1245026	PRJNA177891	177891	Terrabacteria group	Firmicutes	3.42411	46.5	-	ANAP01	232	3431	3203	1/25/13	4/1/17	Contig	Shanghai Jiao Tong University	SAMN02470944	GCA_000333915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/915/GCA_000333915.1_XZL9_v1	23682151	XZL9
Paenibacillus polymyxa	1406	PRJNA261104	261104	Terrabacteria group	Firmicutes	5.76261	45.5	chromosome:NZ_CP009909.1/CP009909.1	-	1	5000	4748	11/19/14	4/10/17	Chromosome	Zhejiang Agricultural and Forestry University	SAMN03165199	GCA_000785455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/455/GCA_000785455.1_ASM78545v1	25883277	CF05
Yersinia intermedia	631	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.9202	47.6	-	CPVI01	68	4538	4300	3/22/15	4/3/17	Scaffold	SC	SAMEA859880	GCA_001167085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/085/GCA_001167085.1_4821_8_7	-	IP10209
Pseudomonas stutzeri KOS6	1218352	PRJNA171881	171881	Proteobacteria	Gammaproteobacteria	4.94721	62.7	-	AMCZ02	5	4575	4383	10/22/12	4/11/17	Scaffold	RIPCM	SAMN02470828	GCA_000307775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/775/GCA_000307775.2_PseStu2.0	23405317	KOS6
Pediococcus acidilactici	1254	PRJNA357663	357663	Terrabacteria group	Firmicutes	2.17062	42.1286	chromosome:NZ_CP018763.1/CP018763.1; plasmid pbcp1:NZ_CP018764.1/CP018764.1; plasmid pbcp2:NZ_CP018765.1/CP018765.1	-	3	2159	2002	12/27/16	4/6/17	Complete Genome	China Agricultural University	SAMN06052263	GCA_001922325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/325/GCA_001922325.1_ASM192232v1	-	BCC1
Propionibacterium freudenreichii	1744	PRJEB6439	270203	Terrabacteria group	Actinobacteria	2.58042	67.3	-	CDAH01	45	2277	2161	3/21/15	4/4/17	Scaffold	INRA STLO	SAMEA2826788	GCA_001368995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/995/GCA_001368995.1_CIRM-BIA512	-	CIRM-BIA 512
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.72766	67.2	-	LOTN01	84	6992	6654	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449149	GCA_001522055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/055/GCA_001522055.1_ASM152205v1	-	RF32-BP4
Pediococcus acidilactici	1254	PRJNA386762	386762	Terrabacteria group	Firmicutes	2.08761	42.1219	chromosome:NZ_CP021484.1/CP021484.1; plasmid pPl424-1:NZ_CP021485.1/CP021485.1; plasmid pPl424-2:NZ_CP021486.1/CP021486.1	-	3	2076	1928	6/6/17	6/8/17	Complete Genome	Microbial Institiue for Fermentation Industry	SAMN07126147	GCA_002173575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/575/GCA_002173575.1_ASM217357v1	-	SRCM100424
Campylobacter concisus	199	PRJNA273422	273422	Proteobacteria	delta/epsilon subdivisions	1.94516	37.6	-	JXUP01	25	2023	1892	12/8/16	4/6/17	Contig	RMIT University	SAMN03291872	GCA_001891085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/085/GCA_001891085.1_ASM189108v1	-	RMIT-JF1
Finegoldia magna	1260	PRJNA383659	383659	Terrabacteria group	Firmicutes	1.67931	32.1	-	NDYB01	40	1628	1544	8/7/17	8/9/17	Contig	Aarhus University	SAMN06769909	GCA_002243115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/115/GCA_002243115.1_ASM224311v1	-	T151023
Lysinibacillus sphaericus	1421	PRJNA252841	252841	Terrabacteria group	Firmicutes	4.48888	37.1	-	JOTQ01	64	4337	4192	9/15/16	4/5/17	Contig	Cornell University	SAMN02863413	GCA_001728805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/805/GCA_001728805.1_ASM172880v1	-	FSL M8-0337
Flavobacterium psychrophilum	96345	PRJNA256263	256263	FCB group	Bacteroidetes/Chlorobi group	2.85073	32.5	chromosome:NZ_CP010276.2/CP010276.2	-	1	2566	2457	4/13/15	4/10/17	Chromosome	University of Copenhagen	SAMN02941922	GCA_000971645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/645/GCA_000971645.2_ASM97164v2	-	PG2
Clostridium butyricum DSM 10702	1316931	PRJNA196472	196472	Terrabacteria group	Firmicutes	4.59681	28.5	-	AQQF01	207	4125	3976	6/10/13	4/1/17	Contig	"State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University"	SAMN02470945	GCA_000409755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/755/GCA_000409755.1_Clostridium_butyricum_DSM_10702_Genome_sequencing	23908293	DSM 10702
Akkermansia muciniphila	239935	PRJEB21068	396410	PVC group	Verrucomicrobia	2.92756	55.9	-	FXXY01	185	2592	2484	7/29/17	8/7/17	Scaffold	"WAGENINGEN UNIVERSITY, LABORATORY OF SYSTEMS AND SYNTHETIC BIOLOGY."	SAMEA104102602	GCA_900184865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/184/865/GCA_900184865.1_Chimpanzee_2_1.fasta	-	-
Rhodococcus erythropolis	1833	PRJNA338215	338215	Terrabacteria group	Actinobacteria	6.27974	62.4	-	MDCH01	37	5820	5692	8/29/16	4/5/17	Contig	LaTrobe University	SAMN05526282	GCA_001715845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/845/GCA_001715845.1_ASM171584v1	-	NSX2
Lactobacillus johnsonii ATCC 33200	525330	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.7736	34.4	-	AZCY01	37	1746	1587	11/6/15	4/4/17	Contig	Shanghai Majorbio	SAMN02369381	GCA_001433975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/975/GCA_001433975.1_ASM143397v1	26415554	ATCC 33200
Lactobacillus sakei subsp. sakei DSM 20017 = JCM 1157	1423833	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.91025	41.1	-	AZDN01	42	1894	1805	11/6/15	4/10/17	Contig	Shanghai Majorbio	SAMN02369509	GCA_001434065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/065/GCA_001434065.1_ASM143406v1	26415554	DSM 20017
Arcobacter butzleri L353	1447261	PRJNA233527	233527	Proteobacteria	delta/epsilon subdivisions	2.14804	26.9	-	JAIU01	67	2202	2110	5/19/15	4/3/17	Scaffold	Agriculture and Agri-Foods Canada	SAMN02581421	GCA_001010695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/695/GCA_001010695.1_A.butzleri_L353_1.0	25947176	L353
Xanthomonas albilineans	29447	PRJNA270163	270163	Proteobacteria	Gammaproteobacteria	3.86323	62.8	-	JZIH01	29	3358	3017	3/25/15	4/3/17	Contig	CIRAD	SAMN03263614	GCA_000963115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/115/GCA_000963115.1_Xal-REU174-G1	-	REU174
Mycobacterium intracellulare	1767	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.35157	68.6	-	LZJO01	193	5199	4887	6/17/16	4/5/17	Contig	JCVI	SAMN04634228	GCA_001667655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/655/GCA_001667655.1_ASM166765v1	-	E3191
Anoxybacillus flavithermus	33934	PRJNA258119	258119	Terrabacteria group	Firmicutes	2.83868	42.3	-	JPZO01	212	2657	478	9/9/14	2/3/15	Contig	THE INSTITUTE OF CYTOLOGY AND GENETICS	SAMN02988316	GCA_000753775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/775/GCA_000753775.1_ASM75377v1	25477412	25
Escherichia albertii	208962	PRJDB3047	301492	Proteobacteria	Gammaproteobacteria	4.70051	49.7	-	BBVG01	84	4901	4451	11/6/15	2/25/17	Scaffold	University of Miyazaki	SAMD00026626	GCA_001514595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/595/GCA_001514595.1_ASM151459v1	26537224	Jun-51
Caldicellulosiruptor bescii	31899	PRJEB19762	377464	Terrabacteria group	Firmicutes	2.97073	35.2	-	FWDH01	3	2871	2649	3/16/17	3/24/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216181	GCA_900168285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/285/GCA_900168285.1_IMG-taxon_2667527206_annotated_assembly	-	MACB1021
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.73532	47.6	-	MDZO01	86	3431	3269	11/17/16	4/5/17	Contig	The University of Queensland	SAMN04320390	GCA_001880435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/435/GCA_001880435.1_ASM188043v1	-	89/4243
Streptococcus equinus	1335	PRJEB15762	347737	Terrabacteria group	Firmicutes	1.88716	37.6	-	FNJY01	6	1847	1784	10/20/16	4/5/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216407	GCA_900101715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/715/GCA_900101715.1_IMG-taxon_2654588134_annotated_assembly	-	Sb10
Variovorax paradoxus	34073	PRJNA294421	294421	Proteobacteria	Betaproteobacteria	9.70706	69.2	-	LKTX01	380	9092	8697	10/19/15	4/11/17	Contig	US EPA	SAMN04146766	GCA_001399595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/595/GCA_001399595.1_ASM139959v1	-	H095
Pectobacterium carotovorum subsp. carotovorum	555	PRJNA258501	258501	Proteobacteria	Gammaproteobacteria	4.76492	51.9	-	JQHJ01	55	4361	4200	9/8/14	4/2/17	Contig	Food and Environment Research Agency	SAMN02999421	GCA_000749855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/855/GCA_000749855.1_ASM74985v1	-	NCPPB 312
Mycobacterium kansasii 824	1299328	PRJNA191792	191792	Terrabacteria group	Actinobacteria	6.59255	66.2	-	JANY01	31	5957	4275	1/27/14	4/2/17	Contig	Institute for Genome Sciences	SAMN02641608	GCA_000524095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/095/GCA_000524095.1_ASM52409v1	-	824
Brachyspira hyodysenteriae	159	PRJNA272555	272555	Spirochaetes	Spirochaetia	3.04541	27.1	-	JXND01	113	2688	2550	5/26/15	4/3/17	Scaffold	Murdoch University	SAMN03283814	GCA_001012945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/945/GCA_001012945.1_ASM101294v1	26098837	B204
Lactobacillus crispatus 214-1	679188	PRJNA40665	40665	Terrabacteria group	Firmicutes	2.0688	36.9	-	ADGR01	187	2146	1970	3/11/10	3/30/17	Contig	JCVI	SAMN00003361	GCA_000177575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/575/GCA_000177575.1_ASM17757v1	-	214-1
Aggregatibacter actinomycetemcomitans RhAA1	1089447	PRJNA258125	258125	Proteobacteria	Gammaproteobacteria	2.23307	44.7	-	JPZI01	11	2236	2096	7/31/15	4/3/17	Contig	"Bumgarner laboratory, Department of Microbiology, University of Washington"	SAMN02988815	GCA_001190115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/190/115/GCA_001190115.1_ASM119011v1	-	RHAA1
Rothia mucilaginosa	43675	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.23674	62	-	JVSP01	16	1808	1716	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197331	GCA_001061665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/665/GCA_001061665.1_ASM106166v1	26230489	141_RMUC
Streptomyces albus subsp. albus	67257	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.32246	71.8	-	JOED01	100	7417	7092	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645227	GCA_000720915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/915/GCA_000720915.1_ASM72091v1	-	NRRL B-2445
Streptococcus intermedius SK54	1095731	PRJDB77	219077	Terrabacteria group	Firmicutes	1.90095	38.6	-	BASV01	30	1868	1728	9/7/13	4/2/17	Contig	"Pediatric Dentistry, Tokyo Dental College"	SAMD00036760	GCA_000474095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/095/GCA_000474095.1_ASM47409v1	-	SK54
Lactobacillus jensenii IM1	1434656	PRJNA231005	231005	Terrabacteria group	Firmicutes	1.54164	34.1	-	AZRD01	112	1462	1343	5/22/15	4/3/17	Scaffold	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN02438382	GCA_001012735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/735/GCA_001012735.1_IM1v1	-	IM1
Lactobacillus ruminis	1623	PRJNA357347	357347	Terrabacteria group	Firmicutes	2.05644	43.4	-	MRYP01	64	2121	1867	3/31/17	4/26/17	Contig	Helsinki University	SAMN06140971	GCA_002076355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/355/GCA_002076355.1_ASM207635v1	28414739	PEL65
Candidatus Tremblaya phenacola PAVE	1266371	PRJNA182905	182905	Proteobacteria	Betaproteobacteria	0.1715	42.1004	chromosome:CP003982.1; plasmid unnamed:CP003983.1	-	2	214	175	6/20/13	1/31/14	Complete Genome	University of South Bohemia	SAMN02604242	GCA_000412755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/755/GCA_000412755.1_ASM41275v1	-	PAVE
Gardnerella vaginalis JCP8151A	1261067	PRJNA181322	181322	Terrabacteria group	Actinobacteria	1.56045	42	-	ATJI01	148	1365	1176	6/25/13	4/1/17	Scaffold	Washington University	SAMN02436772	GCA_000414505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/505/GCA_000414505.1_ASM41450v1	-	JCP8151A
Bifidobacterium pseudocatenulatum	28026	PRJDB4597	325619	Terrabacteria group	Actinobacteria	2.26468	56.3	-	BCYB01	86	1906	1750	6/10/16	4/5/17	Contig	Yakult Central Institute	SAMD00047612	GCA_001686025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/025/GCA_001686025.1_ASM168602v1	27340092	CA-D29
Lactobacillus paracasei subsp. paracasei Lpp230	1256219	PRJNA178448	178448	Terrabacteria group	Firmicutes	2.89232	46.3	-	ANKY01	144	3000	2697	6/11/13	4/1/17	Contig	Danone Research	SAMN02469722	GCA_000409815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/815/GCA_000409815.1_Lpp230.v.1	23894338	Lpp230
Staphylococcus hominis	1290	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.27204	31.3	-	JVHC01	49	2226	2162	7/10/15	4/3/17	Contig	University of Washington	SAMN03197630	GCA_001072955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/955/GCA_001072955.1_ASM107295v1	26230489	437_SHAE
Staphylococcus capitis	29388	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.4232	32.8	-	JWDH01	70	2282	2228	7/10/15	4/3/17	Contig	University of Washington	SAMN03197053	GCA_001069195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/195/GCA_001069195.1_ASM106919v1	26230489	1090_SEPI
Staphylococcus warneri	1292	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.31762	32.6	-	JUVB01	112	2281	2154	7/10/15	4/3/17	Contig	University of Washington	SAMN03197943	GCA_001074135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/135/GCA_001074135.1_ASM107413v1	26230489	738_SWAR
Eikenella corrodens	539	PRJNA386423	386423	Proteobacteria	Betaproteobacteria	2.22785	55.6	-	NHRS01	6	2235	2100	6/21/17	6/24/17	Scaffold	Chosun University	SAMN06947081	GCA_002204395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/395/GCA_002204395.1_ASM220439v1	-	KCOM 1378
Acinetobacter radioresistens DSM 6976 = NBRC 102413 = CIP 103788	981334	PRJNA62429	62429	Proteobacteria	Gammaproteobacteria	3.34601	41.4	-	AIDZ01	346	-	-	2/21/12	1/8/14	Contig	University of Birmingham	SAMN02471601	GCA_000248115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/115/GCA_000248115.2_ASM24811v2	23259572	DSM 6976
Corynebacterium striatum	43770	PRJEB8812	291149	Terrabacteria group	Actinobacteria	15.7843	51.7	-	CTEG01	56	2997	2924	7/27/15	7/27/15	Scaffold	Genoscope CEA	SAMEA3305448	GCA_001261935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/935/GCA_001261935.1_BEN-C_PRJEB8812_v1	-	BM4687
Rhodococcus hoagii	43767	PRJNA316970	316970	Terrabacteria group	Actinobacteria	5.22877	68.8	-	LWBN01	42	4829	4713	4/4/17	6/6/17	Contig	The University of Edinburgh	SAMN04592776	GCA_002078545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/545/GCA_002078545.1_ASM207854v1	27638249	PAM1204
Lactobacillus iners LEAF 2062A-h1	879303	PRJNA52045	52045	Terrabacteria group	Firmicutes	1.30387	32.6	-	AEKJ01	24	1269	1203	11/4/10	3/30/17	Contig	J. Craig Venter Institute	SAMN00115042	GCA_000179975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/975/GCA_000179975.1_ASM17997v1	-	LEAF 2062A-h1
Bacillus atrophaeus Detrick-3	720558	PRJNA46081	46081	Terrabacteria group	Firmicutes	4.12913	43.1	-	AEFR01	30	4209	4007	4/19/11	6/15/17	Contig	Transformational Medical Technologies Program	SAMN01816422	GCA_000204765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/765/GCA_000204765.2_ASM20476v2	21464989	Detrick-3
Klebsiella variicola	244366	PRJNA219268	219268	Proteobacteria	Gammaproteobacteria	6.03586	56.9	-	JCML01	9	6019	5693	2/6/14	8/2/17	Scaffold	Broad Institute	SAMN02356598	GCA_000567005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/005/GCA_000567005.1_Kleb_pneu_UCI_18_V1	-	UCI 18
Ruminococcus flavefaciens	1265	PRJEB16823	350975	Terrabacteria group	Firmicutes	3.56055	49.6	-	FNZT01	43	3119	2945	10/29/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910353	GCA_900109435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/435/GCA_900109435.1_IMG-taxon_2593339146_annotated_assembly	-	YRD2003
Acinetobacter nosocomialis	106654	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.97857	38.7	-	BBOO01	93	3856	3656	11/8/14	4/2/17	Contig	National Institute of Technology and Evaluation	SAMD00019887	GCA_000775895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/895/GCA_000775895.1_ASM77589v1	-	GTC 03312
Streptomyces griseus subsp. griseus	67263	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.88972	70.7	-	JOJE01	265	8957	8250	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645525	GCA_000720255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/255/GCA_000720255.1_ASM72025v1	-	NRRL WC-3645
Streptococcus oralis	1303	PRJNA304333	304333	Terrabacteria group	Firmicutes	2.27873	41.6	-	LQZP01	54	2253	1681	3/2/16	4/5/17	Scaffold	University of Kaiserslautern	SAMN04325033	GCA_001579015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/015/GCA_001579015.1_ASM157901v1	27303717	DD21
Achromobacter xylosoxidans	85698	PRJNA285410	285410	Proteobacteria	Betaproteobacteria	6.51052	67.8	-	LDVI01	514	6126	5774	8/31/15	4/4/17	Contig	University of Queensland	SAMN03753627	GCA_001275845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/845/GCA_001275845.1_ASM127584v1	-	A7
Bacteroides xylanisolvens	371601	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	7.8409	43.9	-	CYZS01	1082	6104	6017	10/1/15	5/19/16	Contig	SC	SAMEA3545247	GCA_001405055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/055/GCA_001405055.1_13414_6_23	-	2789STDY5608839
Xanthomonas fuscans subsp. fuscans	366649	PRJNA264773	264773	Proteobacteria	Gammaproteobacteria	5.04438	64.8	-	JSBT02	154	4528	4009	10/30/14	4/3/17	Contig	University of Exeter	SAMN03142399	GCA_000775215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/215/GCA_000775215.2_NCPPB1433v2	26500625	NCPPB 1433
Pseudomonas syringae pv. viburni	251703	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	6.4055	58.7	-	LJRR01	469	6129	5547	10/20/15	4/4/17	Scaffold	University of Toronto	SAMN03976250	GCA_001401175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/175/GCA_001401175.1_PviICMP3963	-	ICMP3963
Pseudomonas savastanoi pv. savastanoi	360920	PRJNA251981	251981	Proteobacteria	Gammaproteobacteria	6.41511	57.9	-	JOJV01	412	6309	5545	7/21/14	4/2/17	Contig	International Centre for Genetic Engineering and Biotechnology	SAMN02843422	GCA_000732035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/035/GCA_000732035.1_PSV1.0	25278521	DAPP-PG722
Acinetobacter calcoaceticus TG19593	1221295	PRJNA172706	172706	Proteobacteria	Gammaproteobacteria	3.91151	38.7	-	AMIY01	29	3752	3599	10/2/12	3/30/17	Contig	Translational Genomics Research Institute	SAMN02471242	GCA_000301675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/675/GCA_000301675.1_ASM30167v1	-	TG19593
Acinetobacter johnsonii	40214	PRJEB21770	394234	Proteobacteria	Gammaproteobacteria	3.64941	41.5	-	FZRG01	118	3643	3346	7/29/17	8/7/17	Contig	Faculty of medecine and pharmacy RABAT	SAMEA104166933	GCA_900199565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/199/565/GCA_900199565.1_AJ01M	-	-
Acinetobacter junii	40215	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.22683	38.7	-	BBSG01	108	3065	2904	1/23/15	4/3/17	Contig	National Institute of Technology and Evaluation	SAMD00019882	GCA_000831735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/735/GCA_000831735.1_ASM83173v1	-	NBRC 109759
Pseudoalteromonas sp. BSi20652	388384	PRJDA74291	74291	Proteobacteria	Gammaproteobacteria	4.25394	38.9	-	BADT01	298	3890	3463	10/26/11	5/19/17	Contig	Shandong University	SAMD00036589	GCA_000239855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/855/GCA_000239855.2_PspBSi20652_1.0	22275105	BSi20652
Acinetobacter lwoffii	28090	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.29888	43.1	-	BBSQ01	100	3207	3049	2/3/15	4/3/17	Contig	National Institute of Technology and Evaluation	SAMD00019884	GCA_000836095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/836/095/GCA_000836095.1_ASM83609v1	-	NBRC 109760
Pantoea stewartii	66269	PRJNA278249	278249	Proteobacteria	Gammaproteobacteria	4.7665	53.7	-	LDSI01	48	4480	4293	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401414	GCA_001477215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/215/GCA_001477215.1_ASM147721v1	26793183	RSA13
Pediococcus acidilactici	1254	PRJNA388027	388027	Terrabacteria group	Firmicutes	2.09476	42.1001	chromosome:NZ_CP021529.1/CP021529.1; plasmid pPL1189-1:NZ_CP021530.1/CP021530.1; plasmid pPL1189-2:NZ_CP021531.1/CP021531.1	-	3	2089	1941	6/6/17	6/8/17	Complete Genome	Microbial Institute for Fermentation Industry	SAMN07167785	GCA_002174215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/215/GCA_002174215.1_ASM217421v1	-	SRCM101189
Pediococcus acidilactici AGR20	1384067	PRJNA214531	214531	Terrabacteria group	Firmicutes	1.92432	42.4	-	JAGU01	2	1928	1747	1/14/14	4/2/17	Contig	DOE Joint Genome Institute	SAMN02584994	GCA_000526815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/815/GCA_000526815.1_ASM52681v1	-	AGR20
Microcystis aeruginosa PCC 7806SL	1903187	PRJNA343379	343379	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.13934	42.1	chromosome:NZ_CP020771.1/CP020771.1	-	1	5077	4577	4/18/17	4/21/17	Complete Genome	"Institute of Hydrobiology, Chinese Academy of Sciences"	SAMN05786724	GCA_002095975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/975/GCA_002095975.1_ASM209597v1	-	PCC 7806SL
Vibrio mimicus CAIM 1883	1400798	PRJNA219181	219181	Proteobacteria	Gammaproteobacteria	3.98557	46.7	-	AWWL01	344	3717	3358	9/30/13	9/30/13	Contig	"CIAD, A.C."	SAMN02356305	GCA_000473825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/825/GCA_000473825.1_CAIM1883_v1.0	-	CAIM 1883
Vibrio coralliilyticus	190893	PRJNA399049	399049	Proteobacteria	Gammaproteobacteria	5.63628	45.7	-	NRHV01	107	5237	5053	9/5/17	9/18/17	Contig	Oregon State University	SAMN07522471	GCA_002286405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/405/GCA_002286405.1_ASM228640v1	-	080116A
Enterobacter asburiae	61645	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.92329	55.8	-	LAAP01	101	4898	4650	3/19/15	4/3/17	Contig	JCVI	SAMN03283315	GCA_000956765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/765/GCA_000956765.1_ASM95676v1	-	33838
Brucella sp. F5/06	1169233	PRJNA173531	173531	Proteobacteria	Alphaproteobacteria	3.36029	57.1	-	AQKS01	4	3449	3193	4/16/13	4/8/17	Scaffold	Broad Institute	SAMN00839728	GCA_000370985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/985/GCA_000370985.1_Bruc_sp_F5_06_V1	-	F5/06
Pseudomonas amygdali pv. photiniae	251724	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.95393	58.2	-	LJQO01	624	5604	4958	10/20/15	4/11/17	Scaffold	University of Toronto	SAMN03976263	GCA_001400415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/415/GCA_001400415.1_PhoICMP7840	-	ICMP7840
Xanthomonas euvesicatoria	456327	PRJNA275505	275505	Proteobacteria	Gammaproteobacteria	5.35987	64.5	-	JZRT01	103	4846	4428	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03349342	GCA_001009215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/215/GCA_001009215.1_ASM100921v1	-	695
Acinetobacter pittii TG6411	1221309	PRJNA172716	172716	Proteobacteria	Gammaproteobacteria	3.91974	38.8	-	AMJI01	66	3827	3663	10/2/12	3/30/17	Contig	Translational Genomics Research Institute	SAMN02471268	GCA_000302375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/375/GCA_000302375.1_ASM30237v1	-	TG6411
Bacillus cytotoxicus	580165	PRJNA394959	394959	Terrabacteria group	Firmicutes	4.38177	35.9	-	NOKI01	3	4583	4131	8/14/17	8/16/17	Contig	University of Zurich	SAMN07367957	GCA_002251115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/115/GCA_002251115.1_ASM225111v1	-	CH_3
Riemerella anatipestifer RA-SG	1203260	PRJNA161595	161595	FCB group	Bacteroidetes/Chlorobi group	2.17263	35	-	ANGF01	31	2074	1987	12/17/12	3/31/17	Scaffold	"Institute of Veterinary Medicine, Guangdong Academy of Agricultural Sciences"	SAMN02470051	GCA_000321285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/285/GCA_000321285.1_RA-SG	23516232	RA-SG
Staphylococcus lugdunensis	28035	PRJNA380629	380629	Terrabacteria group	Firmicutes	2.60094	33.6953	chromosome:NZ_CP020735.1/CP020735.1; plasmid pVISLISI_2:NZ_CP020736.1/CP020736.1	-	2	2508	2391	4/18/17	5/1/17	Chromosome	EA7290	SAMN06645327	GCA_002096155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/155/GCA_002096155.1_ASM209615v1	-	VISLISI_27
Streptococcus constellatus	76860	PRJNA304333	304333	Terrabacteria group	Firmicutes	1.85685	38.1	-	LQXU01	26	1980	1957	3/2/16	3/24/16	Scaffold	University of Kaiserslautern	SAMN04324328	GCA_001579115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/115/GCA_001579115.1_ASM157911v1	27303717	DD09
Streptococcus anginosus subsp. whileyi CCUG 39159	1095729	PRJNA75125	75125	Terrabacteria group	Firmicutes	2.29473	38.5	-	AICP01	83	2293	2058	4/5/12	3/30/17	Contig	J. Craig Venter Institute	SAMN00761791	GCA_000257765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/765/GCA_000257765.1_ASM25776v1	-	CCUG 39159
Pantoea ananatis	553	PRJNA245800	245800	Proteobacteria	Gammaproteobacteria	5.16348	53.6	-	JMJK01	17	4963	4726	6/18/14	4/2/17	Contig	Centre for Microbial Ecology and Genomics	SAMN02739930	GCA_000710015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/015/GCA_000710015.1_PAPA4-4.0	"2,488,452,025,103,750"	PA4
Gramella flava JLT2011	1229726	PRJNA325700	325700	FCB group	Bacteroidetes/Chlorobi group	4.00787	42.1	chromosome:NZ_CP016359.1/CP016359.1	-	1	3589	3475	1/13/17	4/16/17	Complete Genome	Xiamen University	SAMN05231554	GCA_001951155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/155/GCA_001951155.1_ASM195115v1	-	JLT2011
Acinetobacter haemolyticus	29430	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.14734	38.8	-	DFTZ01	214	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455650	GCA_002379505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/505/GCA_002379505.1_ASM237950v1	28894102	-
Streptococcus gallolyticus	315405	PRJNA306242	306242	Terrabacteria group	Firmicutes	2.13199	37.5	-	LPVQ01	2	2214	1977	12/23/15	4/4/17	Contig	Nestle Research Center and Nestle Institute of Health Sciences 	SAMN04348602	GCA_001481475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/475/GCA_001481475.1_ASM148147v1	26981577	ICDDRB-NRC-S3
Mycoplasma ovipneumoniae	29562	PRJNA253504	253504	Terrabacteria group	Tenericutes	0.996705	30.2	-	JOTH01	119	755	679	8/26/16	4/5/17	Contig	Southwest University for Nationalities	SAMN02870874	GCA_001714895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/895/GCA_001714895.1_ASM171489v1	-	TC4
Leptospira santarosai str. HAI821	1049983	PRJNA74159	74159	Spirochaetes	Spirochaetia	3.99216	41.7	-	AHOK02	52	3978	3678	1/24/12	4/1/17	Contig	J. Craig Venter Institute	SAMN02436585	GCA_000244675.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/675/GCA_000244675.3_gls454175v2.0	-	HAI821
Citrobacter freundii UCI 32	1400137	PRJNA219282	219282	Proteobacteria	Gammaproteobacteria	4.94789	52.1	-	JAPA01	4	4816	4568	1/23/14	4/2/17	Scaffold	Broad Institute	SAMN02356612	GCA_000521945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/945/GCA_000521945.1_Citr_freu_UCI_32_V1	-	UCI 32
[Clostridium] clostridioforme WAL-7855	742736	PRJNA46391	46391	Terrabacteria group	Firmicutes	5.4595	49	-	ADLM01	70	5438	5023	7/16/15	4/3/17	Scaffold	Broad Institute	SAMN00103473	GCA_001078445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/445/GCA_001078445.1_Clos_clos_WAL_7855_v11	-	WAL-7855
Fusobacterium necrophorum subsp. funduliforme	143387	PRJNA315619	315619	Fusobacteria	Fusobacteriia	2.24416	35.1	-	LVDZ01	62	2241	2126	3/23/16	4/5/17	Contig	Aarhus University	SAMN04566685	GCA_001596475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/475/GCA_001596475.1_ASM159647v1	-	LS_1260
Streptococcus parasanguinis	1318	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.10578	42	-	JUYP01	121	2041	1941	7/10/15	4/3/17	Contig	University of Washington	SAMN03197851	GCA_001073735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/735/GCA_001073735.1_ASM107373v1	26230489	65_SPAR
Agrobacterium sp. D14	1336743	PRJNA205086	205086	Proteobacteria	Alphaproteobacteria	5.5415	59.8	-	ASXX01	68	5301	5008	1/22/16	4/11/17	Contig	Huazhong Agricultural University	SAMN04395159	GCA_001526505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/505/GCA_001526505.1_ASM152650v1	-	D14
Haemophilus parainfluenzae	729	PRJNA288973	288973	Proteobacteria	Gammaproteobacteria	1.97835	39.5	-	LFXN01	18	1940	1826	9/4/15	4/4/17	Contig	University of Oklahoma Health Sciences Center	SAMN03840570	GCA_001279145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/145/GCA_001279145.1_ASM127914v1	-	215035-2-ISO5
Actinomyces oris	544580	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.26679	68	-	MSKP01	91	2697	2510	1/5/17	4/6/17	Scaffold	King's College London	SAMN05898725	GCA_001937485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/485/GCA_001937485.1_ASM193748v1	-	CCUG 34286
Enterobacter hormaechei YT2	1259823	PRJNA179500	179500	Proteobacteria	Gammaproteobacteria	4.80286	55.5	-	ANIA01	14	4677	4480	12/31/12	5/18/17	Scaffold	BGI Research Institution	SAMN02469368	GCA_000328905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/905/GCA_000328905.1_ASM32890v1	-	YT2
Pediococcus acidilactici	1254	PRJNA312971	312971	Terrabacteria group	Firmicutes	2.13136	42.1	chromosome:NZ_CP015206.1/CP015206.1	-	1	2073	1958	10/18/16	4/5/17	Complete Genome	Beijing Academy of Agriculture and Forestry Sciences	SAMN04515708	GCA_001767275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/275/GCA_001767275.1_ASM176727v1	-	ZPA017
Sinorhizobium fredii CCBAU 83666	1128334	PRJNA77219	77219	Proteobacteria	Alphaproteobacteria	6.83801	62.1	-	AJQR01	536	6882	6012	5/3/12	5/19/17	Contig	China Agricultural University	SAMN02469490	GCA_000261945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/945/GCA_000261945.1_83666	22586130	CCBAU 83666
Mycoplasma hominis	2098	PRJNA267549	267549	Terrabacteria group	Tenericutes	0.710202	27.2	-	JVIN01	29	630	567	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197593	GCA_001063305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/305/GCA_001063305.1_ASM106330v1	26230489	403_MHOM
Streptococcus parauberis	1348	PRJNA273857	273857	Terrabacteria group	Firmicutes	2.01263	35.6	-	LRBI01	12	2074	1926	3/29/16	4/5/17	Contig	Norfolk State University	SAMN03956445	GCA_001601965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/965/GCA_001601965.1_RP_15_v1	-	RP15
Leuconostoc lactis	1246	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.55071	43.7	-	DGJD01	56	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454886	GCA_002386625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/625/GCA_002386625.1_ASM238662v1	28894102	-
Kingella kingae BB060	1305783	PRJEB1635	194479	Proteobacteria	Betaproteobacteria	1.99304	46.7	-	CBRC01	1	1937	1658	8/15/13	4/1/17	Scaffold	URMITE	SAMEA2271957	GCA_000469925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/925/GCA_000469925.1_BB060	-	BB060
Streptococcus pseudopneumoniae	257758	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.16294	39.4	-	JVLI01	209	2142	1975	7/10/15	4/3/17	Contig	University of Washington	SAMN03197520	GCA_001072315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/315/GCA_001072315.1_ASM107231v1	26230489	330_SPSE
Streptococcus cristatus	45634	PRJNA280672	280672	Terrabacteria group	Firmicutes	1.99167	42.4	-	LAWH01	95	1984	1871	3/11/16	4/5/17	Contig	University of Malaya	SAMN03480680	GCA_001588905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/905/GCA_001588905.1_ASM158890v1	-	JPIIBBV4
Weissella cibaria	137591	PRJNA268711	268711	Terrabacteria group	Firmicutes	2.43623	44.8	-	JWHU01	44	2290	2152	2/19/15	4/3/17	Scaffold	CIT / UCC	SAMN03223844	GCA_000878205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/205/GCA_000878205.1_ASM87820v1	25678547	MG1
Xanthomonas perforans	442694	PRJNA276611	276611	Proteobacteria	Gammaproteobacteria	5.26392	64.6	-	JZVC01	62	4759	4426	5/18/15	4/3/17	Contig	Universidade de Sao Paulo	SAMN03378976	GCA_001009685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/685/GCA_001009685.1_v1	26089818	Xp8-16
Aeromonas caviae	648	PRJNA339286	339286	Proteobacteria	Gammaproteobacteria	4.41515	61.6	-	MDSD01	26	4193	3823	9/16/16	4/5/17	Scaffold	"Biomedical Sciences Institute, University of Sao Paulo"	SAMN05587054	GCA_001730215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/215/GCA_001730215.1_ASM173021v1	-	CH129
Streptobacillus moniliformis	34105	PRJNA319313	319313	Fusobacteria	Fusobacteriia	1.58112	26.2	-	LXKE01	187	1447	1330	6/3/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04892891	GCA_001655915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/915/GCA_001655915.1_ASM165591v1	-	TSD4
Klebsiella aerogenes UCI 45	1400142	PRJNA219297	219297	Proteobacteria	Gammaproteobacteria	5.36184	54.8	-	JCKP01	4	5272	5008	2/3/14	4/6/17	Scaffold	Broad Institute	SAMN02356625	GCA_000534135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/135/GCA_000534135.1_Ente_aero_UCI_45_V1	-	UCI 45
Leuconostoc pseudomesenteroides	33968	PRJNA352459	352459	Terrabacteria group	Firmicutes	2.19336	39.1	-	MPLS01	267	2255	1977	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981470	GCA_002092165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/165/GCA_002092165.1_ASM209216v1	28217118	LMGCF08
Staphylococcus pseudintermedius	283734	PRJNA264198	264198	Terrabacteria group	Firmicutes	2.51785	37.6	-	JTKP01	50	2369	2265	4/18/16	4/5/17	Scaffold	"Department of Technology, Metropolitan University College (Copenhagen, Denmark)"	SAMN03120292	GCA_001623005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/005/GCA_001623005.1_ASM162300v1	27199912	9841998-1
Xanthomonas gardneri	90270	PRJNA276591	276591	Proteobacteria	Gammaproteobacteria	5.29917	63.5	-	JZJU01	237	4632	4308	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03378954	GCA_001009605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/605/GCA_001009605.1_ASM100960v1	26089818	SM220-10
Lactobacillus curvatus	28038	PRJNA324160	324160	Terrabacteria group	Firmicutes	1.84876	42.1	chromosome:NZ_CP016028.1/CP016028.1	-	1	1905	1718	6/14/16	4/5/17	Complete Genome	Okinawa Institute of Advanced Sciences	SAMN05196003	GCA_001663835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/835/GCA_001663835.1_ASM166383v1	-	FBA2
Chlamydia pecorum	85991	PRJNA288203	288203	PVC group	Chlamydiae	1.09411	41.1	-	LFRK01	3	984	933	4/21/16	4/5/17	Contig	University of the Sunshine Coast	SAMN03798519	GCA_001625515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/625/515/GCA_001625515.1_ASM162551v1	-	L17
Aeromonas veronii	654	PRJNA296464	296464	Proteobacteria	Gammaproteobacteria	4.53333	58.7	-	LKJN01	62	4188	3978	11/19/15	4/4/17	Contig	Texas Tech University	SAMN04099649	GCA_001446465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/465/GCA_001446465.1_ASM144646v1	-	TTU2014-108AME
Burkholderia gladioli	28095	PRJNA280904	280904	Proteobacteria	Betaproteobacteria	8.45645	68	-	LAVN01	330	7339	6759	4/29/15	4/3/17	Scaffold	UCSF	SAMN03480622	GCA_000981885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/885/GCA_000981885.1_ASM98188v1	-	SN82F6
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98853	64.1	-	FVBO01	18	4943	4804	3/10/17	3/18/17	Contig	SC	SAMEA2070430	GCA_900130615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/615/GCA_900130615.1_10665_3_15	-	185
Leptospira weilii	28184	PRJNA257145	257145	Spirochaetes	Spirochaetia	4.22872	40.9	-	JQQB01	284	4218	3861	2/24/16	4/4/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947793	GCA_001568915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/915/GCA_001568915.1_ASM156891v1	26833181	56674
Leptospira noguchii	28182	PRJNA257151	257151	Spirochaetes	Spirochaetia	4.59155	35.6	-	JQRB01	593	4113	3698	2/24/16	4/11/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947892	GCA_001569165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/165/GCA_001569165.1_ASM156916v1	26833181	56183
Gallibacterium anatis	750	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.55166	39.6	-	JPXV01	113	2426	2288	11/4/14	4/2/17	Contig	University of Copenhagen	SAMN02900761	GCA_000771955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/955/GCA_000771955.1_ASM77195v1	-	F0003406
Haemophilus haemolyticus	726	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	1.88018	38.3	-	LZOY01	12	1846	1731	7/5/16	4/5/17	Scaffold	TAILORED-Treatment project	SAMN05225441	GCA_001679445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/445/GCA_001679445.1_ASM167944v1	-	CCUG 39154
Melissococcus plutonius	33970	PRJNA263544	263544	Terrabacteria group	Firmicutes	2.07551	31.1	-	JSBC01	11	1835	1614	7/7/15	4/3/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03103711	GCA_001047525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/525/GCA_001047525.1_ASM104752v1	-	H6
Mycobacterium colombiense	339268	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.7185	67.4	-	LZLG01	135	5427	5191	6/17/16	4/5/17	Contig	JCVI	SAMN04634161	GCA_001673175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/175/GCA_001673175.1_ASM167317v1	-	1164983
Mycobacterium africanum MAL010099	1354171	PRJNA211648	211648	Terrabacteria group	Actinobacteria	4.38854	65.6	-	JLAO01	2	4238	4033	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02231115	GCA_000666405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/405/GCA_000666405.1_Myco_afri_MAL010099_V1	-	MAL010099
Pantoea agglomerans	549	PRJNA251954	251954	Proteobacteria	Gammaproteobacteria	5.36593	54.7	-	JNVA01	195	5199	4839	6/18/14	4/2/17	Contig	International Centre for Genetic Engineering and Biotechnology	SAMN02843220	GCA_000710215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/215/GCA_000710215.1_ASM71021v1	25103763	DAPP-PG734
Vibrio nigripulchritudo FTn2	1238441	PRJEB554	222439	Proteobacteria	Gammaproteobacteria	6.613	45.7	-	CANW01	168	6013	5923	10/1/13	4/3/17	Contig	Genoscope CEA	SAMEA3146319	GCA_001050655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/655/GCA_001050655.1_ASM105065v1	23739050	FTn2
Burkholderia cepacia Bu72	886913	PRJNA61371	61371	Proteobacteria	Betaproteobacteria	7.42381	66.9	-	AZHP01	3	6901	6531	12/9/13	4/2/17	Scaffold	JGI	SAMN02597170	GCA_000504665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/665/GCA_000504665.1_ASM50466v1	-	Bu72
Enterococcus hirae	1354	PRJNA342049	342049	Terrabacteria group	Firmicutes	2.92639	36.7	-	MJDN01	32	2791	2617	4/3/17	4/5/17	Contig	Lethbridge Research Centre	SAMN05735010	GCA_002077295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/295/GCA_002077295.1_ASM207729v1	28270110	F0221E 46
Hafnia alvei	569	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.97311	48.5	-	NJFP01	3	4735	4287	6/23/17	6/23/17	Contig	US Food and Drug Administration 	SAMN06173363	GCA_002206365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/365/GCA_002206365.1_ASM220636v1	-	FDAARGOS_350
Selenomonas ruminantium	971	PRJEB17577	351996	Terrabacteria group	Firmicutes	2.82163	52.7	-	FPAX01	36	2650	2536	11/2/16	4/11/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910356	GCA_900116485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/485/GCA_900116485.1_IMG-taxon_2595698242_annotated_assembly	-	GACV-9
Lactobacillus curvatus	28038	PRJNA343164	343164	Terrabacteria group	Firmicutes	1.81076	42	-	MKDR01	77	1833	1722	2/1/17	4/6/17	Contig	ETH Zurich	SAMN05717743	GCA_001982025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/025/GCA_001982025.1_ASM198202v1	-	RI-124
Staphylococcus sciuri	1296	PRJNA327904	327904	Terrabacteria group	Firmicutes	2.80124	32.3	-	MAXU01	11	2811	2739	7/12/16	4/5/17	Contig	Huazhong Agricultural University	SAMN05361856	GCA_001684285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/684/285/GCA_001684285.1_ASM168428v1	-	SAP15-1
Acidithiobacillus thiooxidans	930	PRJNA291500	291500	Proteobacteria	Acidithiobacillia	3.97495	52.4	-	LGYM01	40	4045	3619	4/5/17	4/8/17	Scaffold	Fundacion Ciencia & Vida	SAMN03945026	GCA_002079865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/865/GCA_002079865.1_ASM207986v1	-	CLST
Morganella morganii	582	PRJNA252708	252708	Proteobacteria	Gammaproteobacteria	3.95539	50.9	-	LAGC01	61	3849	3605	3/31/15	4/3/17	Contig	Laboratory for Foodborne Zoonoses	SAMN03375434	GCA_000966695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/695/GCA_000966695.1_ASM96669v1	25999571	8066
Streptococcus sobrinus TCI-61	1074060	PRJNA71889	71889	Terrabacteria group	Firmicutes	2.14474	43.5	-	AGGJ01	336	2158	1901	10/6/11	3/30/17	Contig	JCVI	SAMN02436339	GCA_000227945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/945/GCA_000227945.2_SMUT1-NEX_9-61	-	TCI-61
Geobacillus sp. CAMR5420	1482739	PRJNA243324	243324	Terrabacteria group	Firmicutes	3.49982	51.9	-	JHUS01	96	3615	3313	5/15/14	4/9/17	Contig	Centre for Microbial Ecology and Genomics	SAMN02715734	GCA_000691465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/465/GCA_000691465.1_CAMR5420assem6	24903881	CAMR5420
Actinomyces naeslundii	1655	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.16511	67.7	-	MSRI01	56	2710	2571	1/18/17	4/6/17	Scaffold	King's College London	SAMN05898710	GCA_001956415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/415/GCA_001956415.1_ASM195641v1	-	MMRC12-1
Mycobacterium chelonae	1774	PRJNA347845	347845	Terrabacteria group	Actinobacteria	5.20403	63.9	-	MLIB01	23	5104	4977	10/26/16	4/5/17	Contig	University of Georgia	SAMN05897983	GCA_001853715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/715/GCA_001853715.1_ASM185371v1	-	29192
Vibrio campbellii	680	PRJDB3039	271954	Proteobacteria	Gammaproteobacteria	5.76597	45.4	-	BBKW01	251	5281	5071	1/7/15	4/3/17	Scaffold	University of Miyazaki	SAMD00019136	GCA_000818335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/335/GCA_000818335.1_ASM81833v1	25527835	151112C
Staphylococcus xylosus	1288	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.80092	32.6	-	LNPR01	26	2622	2537	9/28/16	4/5/17	Contig	Tufts University	SAMN04244269	GCA_001748025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/025/GCA_001748025.1_ASM174802v1	-	733A
Lentibacillus amyloliquefaciens	1472767	PRJNA296764	296764	Terrabacteria group	Firmicutes	3.85828	42.1	chromosome:NZ_CP013862.1/CP013862.1	-	1	3858	3623	1/12/16	4/11/17	Complete Genome	"Biogas Institute of Ministry of Agriculture, Chengdu 610041, P. R. China"	SAMN04103130	GCA_001307805.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/805/GCA_001307805.2_ASM130780v2	-	LAM0015
Bacillus simplex	1478	PRJNA403971	403971	Terrabacteria group	Firmicutes	5.51695	40.3	-	NWQJ01	81	5373	5117	9/24/17	9/24/17	Scaffold	Washington University School of Medicine	SAMN07627046	GCA_002351505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/351/505/GCA_002351505.1_ASM235150v1	-	WY10
Leclercia adecarboxylata	83655	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.36684	55.6	-	DBGE01	347	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450325	GCA_002295375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/375/GCA_002295375.1_ASM229537v1	28894102	-
Pseudomonas viridiflava	33069	PRJNA296742	296742	Proteobacteria	Gammaproteobacteria	5.91892	59.4	-	LKEH01	48	5323	5179	5/12/16	4/5/17	Scaffold	New Zealand Institute for Plant & Food research	SAMN04102828	GCA_001642795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/795/GCA_001642795.1_ASM164279v1	-	ICMP 2848
Acinetobacter ursingii	108980	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.4322	40.6	-	DBFS01	42	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455322	GCA_002294685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/685/GCA_002294685.1_ASM229468v1	28894102	-
Campylobacter lanienae	75658	PRJNA340991	340991	Proteobacteria	delta/epsilon subdivisions	1.59744	34.5	-	MJJE01	24	1653	1565	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687011	GCA_002138455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/455/GCA_002138455.1_ASM213845v1	28854596	P0027
Flavobacterium columnare	996	PRJNA360885	360885	FCB group	Bacteroidetes/Chlorobi group	3.39467	29.9	-	MTDD01	134	3067	2893	6/22/17	6/24/17	Contig	"Faculty of Veterinary Science, Chulalongkorn University"	SAMN06216427	GCA_002204895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/895/GCA_002204895.1_ASM220489v1	28624550	NK01
Rhodococcus fascians A21d2	1443893	PRJNA233522	233522	Terrabacteria group	Actinobacteria	5.98154	64.1	-	JMFA01	30	5624	5470	9/30/14	4/2/17	Scaffold	Oregon State University	SAMN02569990	GCA_000760905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/905/GCA_000760905.1_R_fas_A21d2	-	A21d2
Enterococcus mundtii	53346	PRJNA313452	313452	Terrabacteria group	Firmicutes	3.67715	38.2	-	NGMS01	12	3354	3145	5/16/17	5/24/17	Scaffold	Broad Institute	SAMN04634001	GCA_002141315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/315/GCA_002141315.1_ASM214131v1	-	6B1_DIV0119
Streptococcus sp. I-P16	1156433	PRJNA214028	214028	Terrabacteria group	Firmicutes	2.02358	42.1	chromosome:NC_022582.1/CP006776.1	-	1	1979	1838	10/24/13	4/9/17	Complete Genome	Kyung Hee University	SAMN02343234	GCA_000479315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/315/GCA_000479315.1_ASM47931v1	-	-
Xanthomonas vasicola	56459	PRJNA265156	265156	Proteobacteria	Gammaproteobacteria	4.87419	63.1	-	JSFN01	75	4439	3616	11/10/14	4/11/17	Scaffold	University of Exeter	SAMN03145753	GCA_000774005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/005/GCA_000774005.1_NCPPB1394v1	-	NCPPB 1394
Leptospira kirschneri str. 200803703	1193048	PRJNA167254	167254	Spirochaetes	Spirochaetia	4.70361	36	-	AKWG02	87	4348	3940	10/17/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436492	GCA_000306595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/595/GCA_000306595.2_Lkirs200803703v0.2	-	200803703
Salinispora pacifica CNT851	1169180	PRJNA175186	175186	Terrabacteria group	Actinobacteria	5.26303	69.9	-	ARHL01	100	4939	4504	4/19/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441010	GCA_000375285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/285/GCA_000375285.1_ASM37528v1	-	CNT851
Xanthomonas arboricola pv. juglandis	195709	PRJNA310300	310300	Proteobacteria	Gammaproteobacteria	5.06642	65.5	-	LSGZ01	161	4409	4095	5/13/16	4/5/17	Contig	Universidad Mayor	SAMN04450002	GCA_001643295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/295/GCA_001643295.1_ASM164329v1	-	J303
Pseudomonas psychrotolerans	237610	PRJNA278265	278265	Proteobacteria	Gammaproteobacteria	5.26279	64.9	-	LDSP01	172	4756	4608	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401430	GCA_001477245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/245/GCA_001477245.1_ASM147724v1	26793183	NS201
Rhodococcus rhodochrous J3	903528	PRJEB20270	381733	Terrabacteria group	Actinobacteria	6.10685	67.9	-	FXAV01	68	5576	5343	4/20/17	5/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745947	GCA_900177695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/695/GCA_900177695.1_IMG-taxon_2527291702_annotated_assembly	-	J3
Wolbachia pipientis	955	PRJNA407640	407640	Proteobacteria	Alphaproteobacteria	1.32051	38.2	-	NWVJ01	132	1288	1127	9/27/17	9/27/17	Scaffold	New Mexico State University	SAMN07660487	GCA_002379175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/175/GCA_002379175.1_ASM237917v1	-	HN2016
Streptococcus sp. I-G2	1156431	PRJNA214027	214027	Terrabacteria group	Firmicutes	1.99257	42.1	chromosome:NC_022584.1/CP006805.1	-	1	1942	1811	10/24/13	4/9/17	Complete Genome	Kyung Hee University	SAMN02299294	GCA_000479335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/335/GCA_000479335.1_ASM47933v1	-	I-G2
Pseudomonas monteilii	76759	PRJNA237728	237728	Proteobacteria	Gammaproteobacteria	6.24061	62	-	JFBC01	1589	5947	5524	2/24/16	2/24/16	Contig	"University of Manitoba,"	SAMN02647122	GCA_001571445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/445/GCA_001571445.1_ASM157144v1	-	MO2
Streptococcus cristatus AS 1.3089	1302863	PRJNA192658	192658	Terrabacteria group	Firmicutes	2.1421	42.1	chromosome:NC_021175.1/CP004409.1	-	1	2203	1983	5/1/13	9/10/17	Complete Genome	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN02603400	GCA_000385925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/925/GCA_000385925.1_ASM38592v1	23788543	AS 1.3089
Pseudoalteromonas luteoviolacea DSM 6061	1365250	PRJNA213492	213492	Proteobacteria	Gammaproteobacteria	5.89133	41.8	-	AUYB01	168	4993	4786	4/22/16	4/5/17	Contig	Technical University of Denmark	SAMN02250934	GCA_001625655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/625/655/GCA_001625655.1_ASM162565v1	-	DSM 6061
Cronobacter malonaticus	413503	PRJNA257993	257993	Proteobacteria	Gammaproteobacteria	4.59509	56.8	-	JPZD01	352	4597	4186	8/20/14	4/2/17	Scaffold	"Nottingham Trent University, UK"	SAMN02981212	GCA_000742335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/335/GCA_000742335.1_ASM74233v1	-	685
Megasphaera elsdenii	907	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.54424	52.9	-	DGWS01	19	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451181	GCA_002395305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/305/GCA_002395305.1_ASM239530v1	28894102	-
Pseudomonas fragi	296	PRJNA397499	397499	Proteobacteria	Gammaproteobacteria	5.21054	58.1	-	NQKP01	55	4847	4646	8/24/17	8/27/17	Scaffold	CSIRO Agriculture and Food	SAMN07459807	GCA_002269465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/465/GCA_002269465.1_ASM226946v1	-	F1813
Vibrio cyclitrophicus 1F175	1136160	PRJNA81865	81865	Proteobacteria	Gammaproteobacteria	5.27666	43.4	-	AIDB02	109	4732	4534	3/26/12	4/5/17	Scaffold	Massachusetts Institute of Technology	SAMN02470505	GCA_000256135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/135/GCA_000256135.2_ASM25613v2	22491847	1F175
Enterococcus cecorum	44008	PRJNA284229	284229	Terrabacteria group	Firmicutes	2.48026	36.2	-	LDED01	62	2496	2330	6/8/15	4/3/17	Contig	Warsaw University of Life Sciences (SGGW)	SAMN03699965	GCA_001021815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/815/GCA_001021815.1_ASM102181v1	26383654	BB-66
Pseudomonas chlororaphis subsp. aureofaciens 30-84	1038921	PRJNA67533	67533	Proteobacteria	Gammaproteobacteria	6.66632	62.9515	chromosome:NZ_CM001559.1/CM001559.1	AHHJ01	1	12363	12066	7/27/12	6/15/17	Chromosome	"USDA - Agricultural Research Service, USA"	SAMN02436365	GCA_000281915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/915/GCA_000281915.1_ASM28191v1	22792073	30-84
Serratia plymuthica	82996	PRJNA309751	309751	Proteobacteria	Gammaproteobacteria	5.47537	56	-	LRQU01	2	5065	4861	4/4/16	4/5/17	Contig	Abengoa Research	SAMN04440484	GCA_001606165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/165/GCA_001606165.1_ASM160616v1	27198016	A153
Psychrobacter urativorans	45610	PRJNA295628	295628	Proteobacteria	Gammaproteobacteria	2.93158	42.0753	chromosome:NZ_CP012678.1/CP012678.1; plasmid 1:NZ_CP012707.1/CP012707.1; plasmid 2:NZ_CP012708.1/CP012708.1; plasmid 3:NZ_CP012709.1/CP012709.1; plasmid 4:NZ_CP012710.1/CP012710.1; plasmid 5:NZ_CP012711.1/CP012711.1	-	6	2511	2385	9/24/15	4/17/17	Complete Genome	University of Malaya	SAMN04076494	GCA_001298525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/525/GCA_001298525.1_ASM129852v1	-	R10.10B
Alcaligenes faecalis subsp. phenolicus	232846	PRJNA360554	360554	Proteobacteria	Betaproteobacteria	4.15622	56.4	-	MTBI01	9	3805	3723	4/10/17	4/13/17	Contig	Fatima Jinnah Women University	SAMN06212345	GCA_002082085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/085/GCA_002082085.1_ASM208208v1	-	MB207
Bradyrhizobium elkanii	29448	PRJNA319747	319747	Proteobacteria	Alphaproteobacteria	9.19892	63.8	-	LWUI01	90	8553	8143	9/2/16	4/5/17	Scaffold	Kagoshima University	SAMN04903904	GCA_001718205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/205/GCA_001718205.1_ASM171820v1	-	BLY3-8
Staphylococcus equorum	246432	PRJNA316783	316783	Terrabacteria group	Firmicutes	2.78327	32.9	-	LWJW01	91	2696	2578	11/10/16	4/5/17	Contig	CSIR-Institute of Microbial Technology	SAMN04590072	GCA_001876475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/475/GCA_001876475.1_ASM187647v1	-	RE2.40
Desulfosporosinus acidiphilus SJ4	646529	PRJNA61821	61821	Terrabacteria group	Firmicutes	4.99118	42.0694	chromosome:NC_018068.1/CP003639.1; plasmid pDESACI.01:NC_018066.1/CP003640.1; plasmid pDESACI.02:NC_018067.1/CP003641.1	-	3	4637	4403	6/15/12	5/18/17	Complete Genome	DOE Joint Genome Institute	SAMN02232014	GCA_000255115.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/115/GCA_000255115.3_ASM25511v3	23105050	SJ4
Paeniclostridium sordellii	1505	PRJEB8128	277653	Terrabacteria group	Firmicutes	3.52251	27.3	-	CELG01	30	3412	3285	3/13/15	4/4/17	Contig	WTSI	SAMEA1572069	GCA_001372455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/455/GCA_001372455.1_R26833	-	R26833
Bordetella holmesii 1058	1247648	PRJNA178409	178409	Proteobacteria	Betaproteobacteria	3.72775	62.7	-	JDTF01	4	3660	3330	3/20/14	4/2/17	Contig	Institute for Genome Sciences	SAMN02190090	GCA_000598125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/125/GCA_000598125.1_gbhBH006	-	1058
Thalassospira xiamenensis	220697	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	4.36872	54	-	DGMG01	158	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456086	GCA_002388285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/285/GCA_002388285.1_ASM238828v1	28894102	-
Acinetobacter sp. CIP-A165	40373	PRJNA183329	183329	Proteobacteria	Gammaproteobacteria	3.57818	40.3	-	APOK01	8	3379	3131	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01828189	GCA_000367985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/985/GCA_000367985.1_Acin_sp_CIP_A165_V1	-	CIP A165
Bacillus safensis	561879	PRJNA323940	323940	Terrabacteria group	Firmicutes	3.61278	41.7	-	LZRH01	17	3723	3581	7/1/16	4/5/17	Contig	California State University Fresno	SAMN05192528	GCA_001677975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/975/GCA_001677975.1_ASM167797v1	-	MROC1
Klebsiella sp. HMSC25G12	1581064	PRJNA269833	269833	Proteobacteria	Gammaproteobacteria	5.91672	57.2	-	LWNL01	158	5971	5666	10/17/16	2/21/17	Scaffold	The Genome Institute at Washington University	SAMN03436218	GCA_001807705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/705/GCA_001807705.1_ASM180770v1	-	HMSC25G12
Flavobacterium sp. CF136	1144313	PRJNA83049	83049	FCB group	Bacteroidetes/Chlorobi group	5.10202	33.6	-	AKJZ01	113	4298	4187	7/27/12	5/18/17	Contig	Oak Ridge National Lab	SAMN00839621	GCA_000282055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/055/GCA_000282055.1_CF136.fsa	23045501	CF136
Frankia sp. R43	269536	PRJNA281700	281700	Terrabacteria group	Actinobacteria	10.4489	70.9	-	LFCW01	46	8464	8095	10/5/15	4/16/17	Contig	UMR CNRS 5557	SAMN03463641	GCA_001306465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/465/GCA_001306465.1_ASM130646v1	26607894	R43
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.08328	42.064	chromosome I:NZ_LT821323.1/LT821323.1; plasmid II:NZ_LT821324.1/LT821324.1	-	2	973	910	3/18/17	3/24/17	Complete Genome	Functional Genomics Genter Zurich	SAMEA103890752	GCA_900169085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/085/GCA_900169085.1_SWA-2	-	-
Clostridium sp. ASF502	97139	PRJNA176003	176003	Terrabacteria group	Firmicutes	6.48112	47.9	-	AQFU01	30	6109	5708	4/8/13	5/18/17	Scaffold	Broad Institute	SAMN01731007	GCA_000364245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/245/GCA_000364245.1_Clos_bact_ASF502_V1	24723722	ASF502
Sphingomonas sp. BHC-A	322611	PRJNA234505	234505	Proteobacteria	Alphaproteobacteria	3.88766	64.7	-	JDRU02	362	3842	3205	2/6/14	4/17/17	Scaffold	Nanjing Agricultural University	SAMN02592718	GCA_000576455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/455/GCA_000576455.2_ASM57645v2	24699958	BHC-A
Pediococcus acidilactici	1254	PRJNA386761	386761	Terrabacteria group	Firmicutes	2.11538	42.0602	chromosome:NZ_CP021487.1/CP021487.1; plasmid pPl313-1:NZ_CP021488.1/CP021488.1; plasmid pPl313-2:NZ_CP021489.1/CP021489.1	-	3	2114	1860	6/6/17	6/8/17	Complete Genome	Microbial Institiue for Fermentation Industry	SAMN07125954	GCA_002173595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/595/GCA_002173595.1_ASM217359v1	-	SRCM100313
Lactobacillus curvatus	28038	PRJNA377839	377839	Terrabacteria group	Firmicutes	2.00276	42.0255	chromosome:NZ_CP022475.1/CP022475.1; plasmid pKG6_1:NZ_CP022476.1/CP022476.1	-	2	2075	1884	7/24/17	7/28/17	Complete Genome	ETH Zurich	SAMN07350659	GCA_002224505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/505/GCA_002224505.1_ASM222450v1	-	KG6
Enterobacter sp. MGH 25	1329829	PRJNA201940	201940	Proteobacteria	Gammaproteobacteria	5.09306	54.8	-	AYJF01	21	4958	4723	10/30/13	4/10/17	Scaffold	Broad Institute	SAMN02138565	GCA_000492995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/995/GCA_000492995.1_Ente_cloa_complex_MGH_25_V1	-	MGH 25
Staphylococcus sp. HMSC14C01	1581099	PRJNA269868	269868	Terrabacteria group	Firmicutes	2.2188	31.5	-	LUAJ01	47	2194	2087	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03287015	GCA_001808085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/085/GCA_001808085.1_ASM180808v1	-	HMSC14C01
Corynebacterium sp. KPL1859	1203566	PRJNA169446	169446	Terrabacteria group	Actinobacteria	2.54777	58.8	-	AXLU01	3	2405	2215	10/21/13	4/17/17	Scaffold	Broad Institute	SAMN02597001	GCA_000478015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/015/GCA_000478015.1_Cory_sp_KPL1859_V1	-	KPL1859
Providencia alcalifaciens	126385	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	3.99011	42	chromosome:CP023536.1	-	1	3754	3609	9/28/17	9/28/17	Complete Genome	US Food and Drug Administration 	SAMN07312452	GCA_002393505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/505/GCA_002393505.1_ASM239350v1	-	FDAARGOS_408
Escherichia sp. TW09276	754330	PRJNA56123	56123	Proteobacteria	Gammaproteobacteria	4.47314	50.7	-	AEJV01	328	4586	4244	4/21/11	5/18/17	Contig	"Georgia Institute of Technology, School of Civil and Environmental Engineering"	SAMN02469834	GCA_000208445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/208/445/GCA_000208445.2_ASM20844v2	21482770	TW09276
Nostoc sp. 'Peltigera membranacea cyanobiont' 213	2014530	PRJNA389200	389200	Terrabacteria group	Cyanobacteria/Melainabacteria group	8.33144	41.4	-	NOLI01	378	6978	6339	8/11/17	8/15/17	Scaffold	University of Iceland	SAMN07191895	GCA_002245975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/975/GCA_002245975.1_ASM224597v1	-	213
Shewanella sp. ECSMB14102	1579504	PRJNA269200	269200	Proteobacteria	Gammaproteobacteria	4.41244	52.2	-	JWGX01	154	3964	3792	1/2/15	4/10/17	Contig	shanghai ocean university	SAMN03252485	GCA_000813075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/075/GCA_000813075.1_ASM81307v1	26089429	ECSMB14102
Bradyrhizobium sp. WSM2793	1038866	PRJNA165325	165325	Proteobacteria	Alphaproteobacteria	8.87125	63.5	-	ARBF01	84	8409	7865	4/22/13	5/18/17	Scaffold	DOE Joint Genome Institute	SAMN02256452	GCA_000379585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/585/GCA_000379585.1_ASM37958v1	-	WSM2793
Streptococcus sp. C150	435842	PRJNA38751	38751	Terrabacteria group	Firmicutes	2.14248	39.9	-	ACRI01	21	2028	1892	1/19/11	4/17/17	Scaffold	Broad Institute	SAMN02463753	GCA_000187445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/445/GCA_000187445.1_ASM18744v1	-	C150
Psychrobacter sp. DAB_AL43B	1028416	PRJEB12380	326093	Proteobacteria	Gammaproteobacteria	3.30915	42	chromosome I:NZ_LT799838.1/LT799838.1	-	1	2825	2712	3/10/17	3/18/17	Complete Genome	CEBITEC	SAMEA3731239	GCA_900168255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/255/GCA_900168255.1_B431	-	-
Bifidobacterium sp. UBA741	1946111	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.81248	60.1	-	DBKV01	145	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452636	GCA_002298645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/645/GCA_002298645.1_ASM229864v1	28894102	-
Serratia sp. M24T3	932213	PRJNA104949	104949	Proteobacteria	Gammaproteobacteria	5.25455	50.1	-	AJHJ01	114	4883	4669	4/5/12	5/19/17	Contig	University of Coimbra - Faculty of Life Sciences	SAMN02471700	GCA_000257645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/645/GCA_000257645.1_ASM25764v1	22740681	M24T3
Polaromonas sp. JS666	296591	PRJEB16221	348989	Proteobacteria	Betaproteobacteria	5.07253	64.7	-	FNHX01	26	4776	4686	10/20/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05720382	GCA_900103405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/405/GCA_900103405.1_IMG-taxon_2636416056_annotated_assembly	-	JS666 UNC47MFTsu3.1
Sulfurovum sp. 35-42-20	1970445	PRJNA379596	379596	Proteobacteria	delta/epsilon subdivisions	1.9017	42.2	-	NCFN01	162	2002	1940	8/16/17	8/16/17	Scaffold	None	SAMN06622319	GCA_002281155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/155/GCA_002281155.1_ASM228115v1	-	-
Pantoea sp. IMH	1267600	PRJNA239657	239657	Proteobacteria	Gammaproteobacteria	4.09115	54.7	-	JFGT01	8	3799	3609	3/25/14	4/9/17	Contig	Chinese Academy of Sciences	SAMN02670971	GCA_000599885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/885/GCA_000599885.1_IMH	24723713	IMH
Prevotella sp. FD3004	1408309	PRJNA223015	223015	FCB group	Bacteroidetes/Chlorobi group	2.95707	47.4	-	JQKR01	14	2447	2373	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02744713	GCA_000746155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/155/GCA_000746155.1_ASM74615v1	-	FD3004
Enterococcus sp. HMSC072H05	1715012	PRJNA296523	296523	Terrabacteria group	Firmicutes	4.45819	39	-	LTHV01	156	4403	4287	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477564	GCA_001810425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/425/GCA_001810425.1_ASM181042v1	-	HMSC072H05
Lactobacillus sp. HMSC064F12	1715146	PRJNA296274	296274	Terrabacteria group	Firmicutes	2.9501	46.6	-	LTJB01	73	2959	2762	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477524	GCA_001809765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/765/GCA_001809765.1_ASM180976v1	-	HMSC064F12
Novosphingobium sp. AAP93	1523427	PRJNA255565	255565	Proteobacteria	Alphaproteobacteria	4.26711	65.5	-	LJHZ01	149	3890	3760	9/22/15	4/11/17	Contig	"Institute of Microbiology, ASCR"	SAMN02927144	GCA_001296055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/055/GCA_001296055.1_ASM129605v1	-	AAP93
Calothrix sp. HK-06	1137096	PRJNA347433	347433	Terrabacteria group	Cyanobacteria/Melainabacteria group	9.99045	38.8	-	MRCD01	243	8748	8078	12/14/16	4/16/17	Scaffold	"Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences"	SAMN05890688	GCA_001904745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/745/GCA_001904745.1_ASM190474v1	-	HK-06
Treponema sp. RIFOXYC1_FULL_61_9	1802381	PRJNA288027	288027	Spirochaetes	Spirochaetia	4.40565	60.3	-	MIDN01	266	4191	3190	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314534	GCA_001830195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/195/GCA_001830195.1_ASM183019v1	27774985	-
Anabaena sp. AL09	1710891	PRJNA294801	294801	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.65719	38.1	-	LJOQ01	109	4333	3988	6/20/16	6/20/16	Scaffold	Oregon State University	SAMN04028827	GCA_001672255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/255/GCA_001672255.1_ASM167225v1	-	-
Citrobacter sp. MGH103	1686378	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.39667	51.8	-	LESN01	9	5443	5123	6/19/15	4/10/17	Scaffold	Broad Institute	SAMN03280163	GCA_001034475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/475/GCA_001034475.1_Citr_freu_complex_MGH103_V1	-	MGH103
Methylobacterium sp. Leaf89	1736245	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	5.00529	69.5	-	LMML01	32	4602	4392	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151625	GCA_001422215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/215/GCA_001422215.1_Leaf89	26633631	Leaf89
Herbaspirillum sp. B65	137708	PRJDA69979	69979	Proteobacteria	Betaproteobacteria	5.78755	61.4	-	BADI01	1241	5568	4278	12/26/12	5/18/17	Scaffold	Kazusa DNA Research Institute	SAMD00036579	GCA_000333555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/555/GCA_000333555.1_ASM33355v1	-	B65
Candidatus Arthromitus sp. SFB-5	1054946	PRJNA69909	69909	Terrabacteria group	Firmicutes	0.928724	28.3	-	AFXV01	338	1216	1200	3/14/12	7/29/15	Contig	Stanford University	SAMN00631071	GCA_000252745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/745/GCA_000252745.2_ASM25274v2	-	SFB-5
Nocardioides sp. Root682	1736586	PRJNA297942	297942	Terrabacteria group	Actinobacteria	5.2147	69.3	-	LMHJ01	8	4915	4807	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155855	GCA_001427795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/795/GCA_001427795.1_Root682	26633631	Root682
Epulopiscium sp. Nuni2H_MBin001	1884656	PRJNA294498	294498	Terrabacteria group	Firmicutes	2.70724	34.5	-	MDJM01	88	2288	2185	2/10/17	2/10/17	Scaffold	King Abdullah University of Science and Technology (KAUST)	SAMN05466591	GCA_001994995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/995/GCA_001994995.1_Nuni2H	-	-
Erythrobacter sp. HI0028	1822227	PRJNA305749	305749	Proteobacteria	Alphaproteobacteria	3.30892	64	-	LWES01	610	3400	2993	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580766	GCA_001634795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/795/GCA_001634795.1_ASM163479v1	-	HI0028
Sulfitobacter sp. HI0129	1822268	PRJNA305749	305749	Proteobacteria	Alphaproteobacteria	4.21049	63	-	LWGH01	1145	4392	3716	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580807	GCA_001635395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/395/GCA_001635395.1_ASM163539v1	-	HI0129
Polaribacter sp. WS2-14	1920034	PRJNA388047	388047	FCB group	Bacteroidetes/Chlorobi group	2.67386	31.2	-	NIDL01	19	2337	2279	6/20/17	6/22/17	Contig	Shandong Uniwersity at Weihai	SAMN07171769	GCA_002201235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/235/GCA_002201235.1_ASM220123v1	-	WS2-14
Marinobacter sp. HL-58	1479237	PRJNA239506	239506	Proteobacteria	Gammaproteobacteria	4.29152	57.6	-	JMLY01	1	3896	3768	5/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743386	GCA_000686085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/085/GCA_000686085.1_ASM68608v1	-	HL-58
Acidovorax sp. Leaf78	1736237	PRJNA297956	297956	Proteobacteria	Betaproteobacteria	5.74941	66.3	-	LMLZ01	26	5108	4975	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151617	GCA_001422735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/735/GCA_001422735.1_Leaf78	26633631	Leaf78
Psychrobacter sp. ENNN9_III	1254334	PRJNA259242	259242	Proteobacteria	Gammaproteobacteria	2.989	42.7	-	LNUO01	210	2493	2282	12/8/15	4/11/17	Contig	Rede Paraense de Genômica e Proteômica	SAMN04287219	GCA_001462175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/175/GCA_001462175.1_PsyENNN9_III1.0	-	ENNN9_III
Caulobacter sp. Root1455	1736465	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	5.08324	68.6	-	LMFQ01	26	4688	4545	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04155734	GCA_001426905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/905/GCA_001426905.1_Root1455	26633631	Root1455
Maribacter sp. UBA4516	1946804	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.58041	35.7	-	DGMO01	62	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450765	GCA_002388445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/445/GCA_002388445.1_ASM238844v1	28894102	-
Geobacter sp. UBA4050	1961391	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.26798	57.3	-	DFZS01	105	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454805	GCA_002382185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/185/GCA_002382185.1_ASM238218v1	28894102	-
Janthinobacterium sp. S3-2	1747903	PRJNA300713	300713	Proteobacteria	Betaproteobacteria	5.84406	63	-	LOCQ01	62	5265	5079	7/1/16	4/13/17	Contig	Aarhus University	SAMN04229034	GCA_001677885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/885/GCA_001677885.1_ASM167788v1	-	S3-2
Eubacterium sp. CAG:146	1262879	PRJEB722	206637	Terrabacteria group	Firmicutes	2.65398	37.8	-	CAXQ01	173	2307	2286	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138472	GCA_000431695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/695/GCA_000431695.1_MGS146	-	-
Alcanivorax sp. HI0033	1822228	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	3.6596	59.1	-	LWET01	509	3483	3194	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580767	GCA_001634835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/835/GCA_001634835.1_ASM163483v1	-	HI0033
Brevundimonas sp. Leaf363	1736353	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	3.12747	68.5	-	LMPZ01	7	3041	2973	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151743	GCA_001424025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/025/GCA_001424025.1_Leaf363	26633631	Leaf363
Pedobacter sp. V48	509635	PRJNA214790	214790	FCB group	Bacteroidetes/Chlorobi group	6.45999	38.9	-	AWRU01	34	5613	5043	1/27/14	4/17/17	Scaffold	University of Massachusetts Dartmouth	SAMN02641628	GCA_000523515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/515/GCA_000523515.1_PedoV48v1.0	24578271	V48
Pseudovibrio sp. Tun.PHSC04-5.I4	1798213	PRJEB16282	348853	Proteobacteria	Alphaproteobacteria	6.54984	50.3	-	FNLB01	8	6072	5702	10/20/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04515695	GCA_900104145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/145/GCA_900104145.1_IMG-taxon_2636416046_annotated_assembly	-	Tun.PHSC04-5.I4
Stenotrophomonas sp. TD3	1641707	PRJNA347873	347873	Proteobacteria	Gammaproteobacteria	4.91721	66.5	-	MOYM01	10	4595	4445	1/9/17	4/17/17	Contig	Wenzhou University	SAMN05898096	GCA_001939825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/825/GCA_001939825.1_ASM193982v1	-	TD3
Thermotoga sp. 50_1627	1635260	PRJNA278302	278302	Thermotogae	Thermotogae	2.11908	49.8	-	LGFH01	106	2102	2102	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445133	GCA_001508295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/295/GCA_001508295.1_ASM150829v1	26787827	-
Lactobacillus curvatus	28038	PRJNA327475	327475	Terrabacteria group	Firmicutes	1.98699	42	chromosome:NZ_CP016602.1/CP016602.1	-	1	2042	1875	8/2/16	4/5/17	Complete Genome	world institute of kimchi	SAMN05300426	GCA_001698165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/165/GCA_001698165.1_ASM169816v1	-	WiKim52
Ruminococcus sp. YE71	244362	PRJEB17757	353210	Terrabacteria group	Firmicutes	4.07344	51.1	-	FPIR01	43	3649	3457	11/12/16	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910447	GCA_900119155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/155/GCA_900119155.1_IMG-taxon_2593339149_annotated_assembly	-	YE71
Thioalkalivibrio sp. ALJ6	748654	PRJNA176574	176574	Proteobacteria	Gammaproteobacteria	2.84509	64.3	-	ARIE01	17	2745	2611	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441349	GCA_000377365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/365/GCA_000377365.1_ASM37736v1	-	ALJ6
Bacteroides sp. 3_1_33FAA	457391	PRJNA38353	38353	FCB group	Bacteroidetes/Chlorobi group	5.41971	42.1	-	ACPS01	35	4575	4345	10/23/09	5/18/17	Scaffold	Broad Institute	SAMN02463736	GCA_000162195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/195/GCA_000162195.1_ASM16219v1	-	3_1_33FAA
Exiguobacterium sp. RIT341	1470592	PRJNA239293	239293	Terrabacteria group	Firmicutes	3.10702	46.7	-	JFYW01	15	3177	3085	4/14/14	4/9/17	Contig	Monash University Malaysia	SAMN02676631	GCA_000632205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/205/GCA_000632205.1_Willow_Endophyte_RIT341	-	RIT341
Coprobacillus sp. CAG:826	1262857	PRJEB1018	206871	Terrabacteria group	Firmicutes	1.5855	33.7	-	CBHZ01	29	1442	1394	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138746	GCA_000437235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/235/GCA_000437235.1_MGS826	-	-
Shigella sp. FC2710	1898676	PRJNA342387	342387	Proteobacteria	Gammaproteobacteria	4.59046	50.8	-	MINU01	546	5363	4157	9/17/16	8/8/17	Contig	Christian Medical College	SAMN05756149	GCA_001730465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/465/GCA_001730465.1_ASM173046v1	-	FC2710
Prochlorococcus sp. MIT 0703	1499504	PRJNA246696	246696	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.57506	50.6	-	JNBC01	61	2595	2432	9/29/14	4/9/17	Contig	MIT	SAMN02769575	GCA_000760335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/335/GCA_000760335.1_ASM76033v1	25977791	MIT 0703
Fusobacterium sp. CAG:649	1262900	PRJEB972	206947	Fusobacteria	Fusobacteriia	2.1598	26.7	-	CBBC01	172	2130	2113	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138572	GCA_000433695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/695/GCA_000433695.1_MGS649	-	-
Desulfovibrio sp. An276	1965618	PRJNA377666	377666	Proteobacteria	delta/epsilon subdivisions	3.2004	55.4	-	NFJC01	99	2859	2730	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473704	GCA_002159665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/665/GCA_002159665.1_ASM215966v1	-	An276
Actinomyces sp. oral taxon 849 str. F0330	653386	PRJNA39355	39355	Terrabacteria group	Actinobacteria	3.45937	66.7	-	ACTB01	76	2949	2602	12/22/11	4/17/17	Scaffold	Broad Institute	SAMN02463764	GCA_000239715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/715/GCA_000239715.1_Actinomyces_sp_F0330_V1	-	F0330
Micromonospora sp. NBRC 110037	1621261	PRJDB3540	317142	Terrabacteria group	Actinobacteria	6.79531	72.9	-	BBVA01	24	6142	5964	3/30/16	4/12/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00026623	GCA_001652995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/995/GCA_001652995.1_ASM165299v1	-	NBRC 110037
Parabacteroides sp. Marseille-P3160	1917887	PRJEB18272	355709	FCB group	Bacteroidetes/Chlorobi group	4.76129	43.1	-	FUFV01	5	3786	3613	3/16/17	6/12/17	Scaffold	URMITE	SAMEA18123418	GCA_900162725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/725/GCA_900162725.1_PRJEB18272	-	Marseille-P3160
Ralstonia sp. 25mfcol4.1	1761899	PRJEB16294	348892	Proteobacteria	Betaproteobacteria	6.3374	65.6	-	FNJO01	44	5714	5519	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488595	GCA_900104095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/095/GCA_900104095.1_IMG-taxon_2639762659_annotated_assembly	-	25MFCol4.1
Propionibacterium sp. HMSC078F01	1739277	PRJNA299927	299927	Terrabacteria group	Actinobacteria	2.47768	60	-	LTGX01	14	2492	2378	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477590	GCA_001810965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/965/GCA_001810965.1_ASM181096v1	-	HMSC078F01
Olsenella sp. An285	1965621	PRJNA377666	377666	Terrabacteria group	Actinobacteria	2.41006	67	-	NFIZ01	33	2145	2049	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473707	GCA_002159625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/625/GCA_002159625.1_ASM215962v1	-	An285
Alistipes sp. CAG:514	1262696	PRJEB913	206699	FCB group	Bacteroidetes/Chlorobi group	2.39197	53.4	-	CAWO01	116	1938	1898	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138438	GCA_000431015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/015/GCA_000431015.1_MGS514	-	-
Campylobacter sp. RM8965	1895634	PRJNA341052	341052	Proteobacteria	delta/epsilon subdivisions	1.50275	32.5	-	MJLM01	28	1542	1480	5/15/17	9/19/17	Contig	USDA	SAMN05687072	GCA_002139135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/135/GCA_002139135.1_ASM213913v1	28854596	RM8965
Neisseria sp. HMSC15G01	1581107	PRJNA269876	269876	Proteobacteria	Betaproteobacteria	2.17887	49.2	-	LUAO01	47	2128	1950	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03287028	GCA_001808255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/255/GCA_001808255.1_ASM180825v1	-	HMSC15G01
Porphyromonas sp. COT-290 OH3588	1515617	PRJNA253618	253618	FCB group	Bacteroidetes/Chlorobi group	2.29377	49.9	-	JRFC01	48	1788	1705	10/27/14	4/9/17	Contig	UC Davis	SAMN03004271	GCA_000769075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/075/GCA_000769075.1_ASM76907v1	25858832	COT-290 OH3588
Bartonella sp. WD12.1	1933903	PRJNA360985	360985	Proteobacteria	Alphaproteobacteria	1.81395	37.8	-	MUBG01	3	1640	1454	3/7/17	3/10/17	Scaffold	University of Basel	SAMN06213865	GCA_002022415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/415/GCA_002022415.1_ASM202241v1	28338931	WD12.1
Peptoniphilus sp. EL1	1673725	PRJEB16530	349858	Terrabacteria group	Firmicutes	1.84518	29.9	-	FNWF01	3	1777	1682	10/27/16	4/13/17	Contig	URMITE	SAMEA4521260	GCA_900106515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/515/GCA_900106515.1_PRJEB16530	-	EL1
Veillonella sp. oral taxon 158 str. F0412	879309	PRJNA52053	52053	Terrabacteria group	Firmicutes	2.17675	38.9	-	AENU01	21	2060	2000	12/2/10	9/20/13	Contig	J. Craig Venter Institute	SAMN00116785	GCA_000183505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/505/GCA_000183505.2_ASM18350v1	-	F0412
Capnocytophaga sp. oral taxon 336 str. F0502	1203603	PRJNA170347	170347	FCB group	Bacteroidetes/Chlorobi group	2.78821	39.4	-	ATCI01	8	2472	2305	6/14/13	4/17/17	Scaffold	Broad Institute	SAMN02596983	GCA_000411575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/575/GCA_000411575.1_Capn_sp_oral_taxon_336_F0502_V1	-	F0502
Delftia sp. 13_1_40CM_3_66_6	1805104	PRJNA297196	297196	Proteobacteria	Betaproteobacteria	4.64924	66.4	-	MNGK01	292	4337	4022	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327991	GCA_001918675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/918/675/GCA_001918675.1_ASM191867v1	27843720	-
Collinsella sp. CAG:289	1262851	PRJEB813	206808	Terrabacteria group	Actinobacteria	1.84897	57.6	-	CBHV01	48	1693	1652	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138742	GCA_000437155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/155/GCA_000437155.1_MGS289	-	-
Thalassospira sp. KO164	1798192	PRJEB16482	349374	Proteobacteria	Alphaproteobacteria	4.81489	54.8	-	FNTU01	2	4519	4395	10/22/16	4/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04515623	GCA_900105665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/665/GCA_900105665.1_IMG-taxon_2634166343_annotated_assembly	-	KO164
Sulfurospirillum sp. UBA4051	1947595	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.59277	41.7	-	DFZR01	33	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454806	GCA_002383505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/505/GCA_002383505.1_ASM238350v1	28894102	-
[Clostridium] stercorarium subsp. leptospartum DSM 9219	1346611	PRJNA208366	208366	Terrabacteria group	Firmicutes	3.14836	42	chromosome:NZ_CP014673.1/CP014673.1	-	1	2793	2657	8/2/16	4/13/17	Complete Genome	University of Manitoba	SAMN04539467	GCA_001697285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/285/GCA_001697285.1_ASM169728v1	-	DSM 9219
Afipia sp. NBIMC_P1-C1	1320552	PRJNA197274	197274	Proteobacteria	Alphaproteobacteria	5.13331	61.6	-	AVBK01	90	4960	4775	2/12/14	4/9/17	Contig	FDA	SAMN02951891	GCA_000568595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/595/GCA_000568595.1_NBIMC_P1-C1	24367538	NBIMC_P1-C1
Pseudonocardia sp. CNS-004	1904967	PRJNA344658	344658	Terrabacteria group	Actinobacteria	9.20309	72.6	-	MKJV01	156	9224	6324	1/11/17	4/17/17	Contig	"Scripps Institution of Oceanography, UCSD"	SAMN05830218	GCA_001942185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/185/GCA_001942185.1_ASM194218v1	27902408	CNS-004
Haemophilus sp. C1	1661745	PRJNA285410	285410	Proteobacteria	Gammaproteobacteria	1.98729	38.3	-	LDVZ01	82	1952	1830	8/31/15	4/11/17	Contig	University of Queensland	SAMN03753644	GCA_001276515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/515/GCA_001276515.1_ASM127651v1	-	C1
Methanosarcina sp. 1.H.A.2.2	1483601	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	3.87073	43.1	-	JJQL01	103	3301	3125	4/23/15	4/10/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708993	GCA_000979975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/975/GCA_000979975.1_gtlEnvA5udCFS	25756680	1.H.A.2.2
Selenomonas sp. ND2010	1410618	PRJNA223458	223458	Terrabacteria group	Firmicutes	2.86705	48.7	-	JNKI01	63	2728	2584	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841186	GCA_000702005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/005/GCA_000702005.1_ASM70200v1	-	ND2010
Thiomonas sp. 20-64-9	1970454	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	2.64496	64.4	-	NCAN01	202	2631	2507	8/16/17	8/16/17	Scaffold	None	SAMN06622450	GCA_002255485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/485/GCA_002255485.1_ASM225548v1	-	-
Rhodanobacter sp. FW510-T8	1524463	PRJNA255810	255810	Proteobacteria	Gammaproteobacteria	3.72282	67.9	-	LVJT01	113	3376	3250	4/8/16	4/12/17	Contig	ENIGMA	SAMN02929141	GCA_001617375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/375/GCA_001617375.1_Rhodanobacter_sp._FW501-T8	27048805	FW510-T8
Rothia sp. HMSC062H08	1739269	PRJNA299919	299919	Terrabacteria group	Actinobacteria	2.29956	59.5	-	LTHF01	38	1807	1724	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477583	GCA_001810775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/775/GCA_001810775.1_ASM181077v1	-	HMSC062H08
Sphingobacterium sp. CZ-UAM	1933868	PRJNA360856	360856	FCB group	Bacteroidetes/Chlorobi group	5.84241	40.8	-	MTCM01	12	4880	4762	2/15/17	4/17/17	Contig	Universidad Nacional Autonoma de Mexico	SAMN06215933	GCA_002000245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/245/GCA_002000245.1_ASM200024v1	-	CZ-UAM
Desulfosporosinus sp. BICA1-9	1531958	PRJNA257561	257561	Terrabacteria group	Firmicutes	6.98715	42.8	-	JUEE01	266	6614	5942	12/16/14	3/24/15	Contig	EPFL	SAMN02953445	GCA_000802135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/135/GCA_000802135.1_ASM80213v1	-	-
Citromicrobium sp. UBA3494	1946345	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.89414	64.7	-	DFQH01	10	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457118	GCA_002377695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/695/GCA_002377695.1_ASM237769v1	28894102	-
Megasphaera sp. UBA1696	1946843	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.95236	50.8	-	DCJQ01	50	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457139	GCA_002319965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/965/GCA_002319965.1_ASM231996v1	28894102	-
Sphingobium sp. C100	1207055	PRJNA170394	170394	Proteobacteria	Alphaproteobacteria	4.77681	63.9	-	AYOY01	219	4591	4293	12/16/13	4/17/17	Contig	The Third Institute of State Oceanic Administration (SOA)	SAMN02471157	GCA_000508185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/185/GCA_000508185.1_SOAPdenovo_for_version_v2.01_of_the_Sphingobium_sp._C100_genome	24482512	C100
Pusillimonas sp. UBA3987	1947369	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	3.26948	54.3	-	DGCD01	21	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455674	GCA_002384935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/935/GCA_002384935.1_ASM238493v1	28894102	-
Halomonas sp. 23_GOM-1509m	1380358	PRJNA213795	213795	Proteobacteria	Gammaproteobacteria	5.37178	54.5	-	JADJ01	34	4960	4784	1/10/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02584988	GCA_000518325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/325/GCA_000518325.1_ASM51832v1	-	23_GOM-1509m
Idiomarina sp. 34-48-12	1970393	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	2.10288	47.5	-	NCJS01	283	2179	2077	8/16/17	8/16/17	Scaffold	None	SAMN06622210	GCA_002279005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/005/GCA_002279005.1_ASM227900v1	-	-
Acidiphilium sp. 37-67-22	1970300	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.4784	67	-	NCBT01	937	2909	2632	8/16/17	8/16/17	Scaffold	None	SAMN06622417	GCA_002279335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/335/GCA_002279335.1_ASM227933v1	-	-
Aeromicrobium sp. REDSEA-S35_B1	1811527	PRJNA289734	289734	Terrabacteria group	Actinobacteria	3.55876	72.1	-	LUNG01	83	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534556	GCA_001626245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/245/GCA_001626245.1_ASM162624v1	27377622	-
Xanthomonas sp. NCPPB1132	487528	PRJNA73025	73025	Proteobacteria	Gammaproteobacteria	4.64898	68.4	-	AGHZ01	1717	-	-	9/29/11	11/22/13	Contig	The University of Exeter	SAMN00752560	GCA_000226915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/915/GCA_000226915.2_ASM22691v2	24710305	NCPPB1132
Streptococcus pantholopis	1811193	PRJNA314407	314407	Terrabacteria group	Firmicutes	2.2413	42	chromosome:NZ_CP014699.1/CP014699.1	-	1	2118	1991	5/11/16	4/12/17	Complete Genome	National Institute for Communicable Disease Control and Prevention	SAMN04534843	GCA_001642085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/085/GCA_001642085.1_ASM164208v1	-	TA 26
Atopobium sp. UBA2729	1946067	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.61344	60.8	-	DEKF01	76	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06457130	GCA_002354295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/295/GCA_002354295.1_ASM235429v1	28894102	-
Sulfurimonas sp. RIFOXYD2_FULL_37_8	1802262	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.10948	35	-	MICI01	469	2311	1436	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314661	GCA_001829795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/795/GCA_001829795.1_ASM182979v1	27774985	-
Chryseobacterium sp. YR480	1500296	PRJNA247538	247538	FCB group	Bacteroidetes/Chlorobi group	4.97868	36.3	-	JUGN01	18	4566	4435	12/9/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02787114	GCA_000799325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/325/GCA_000799325.1_ASM79932v1	-	YR480
Cellulomonas sp. Root485	1736546	PRJNA297942	297942	Terrabacteria group	Actinobacteria	4.6547	72.3	-	LMFC01	7	4270	4172	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04155815	GCA_001426705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/705/GCA_001426705.1_Root485	26633631	Root485
Hydrogenophaga sp. 70-12	1895769	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	4.44759	70.2	-	MKSS01	428	4365	3963	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660535	GCA_001897365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/365/GCA_001897365.1_ASM189736v1	-	-
Methylophaga sp. UBA1490	1946868	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.00674	45	-	DCRO01	15	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455384	GCA_002325155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/155/GCA_002325155.1_ASM232515v1	28894102	-
Mesorhizobium sp. Root554	1736557	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	3.74972	63	-	LMGA01	2	3631	3551	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155826	GCA_001427025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/025/GCA_001427025.1_Root554	26633631	Root554
Micavibrio sp. UBA2020	1946912	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.35366	56.8	-	DDBY01	243	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454464	GCA_002334985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/985/GCA_002334985.1_ASM233498v1	28894102	-
Variovorax sp. YR634	1884385	PRJEB16576	349884	Proteobacteria	Betaproteobacteria	7.15761	66.4	-	FNOL01	66	6770	6625	10/22/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05518669	GCA_900106655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/655/GCA_900106655.1_IMG-taxon_2690315617_annotated_assembly	-	YR634
Vibrio crassostreae	246167	PRJEB10717	297081	Proteobacteria	Gammaproteobacteria	5.47296	44.5	-	FAUO01	17	4914	4691	11/29/15	4/5/17	Contig	CENTRE OF MARINE SCIENCES	SAMEA3532819	GCA_001486525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/486/525/GCA_001486525.1_Evh12	-	Evh12
Xanthomonas translucens	343	PRJNA302486	302486	Proteobacteria	Gammaproteobacteria	4.71644	68	-	LNSS01	297	4060	3647	12/3/15	4/4/17	Contig	Kansas State University	SAMN04279076	GCA_001455835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/835/GCA_001455835.1_ASM145583v1	-	LB5
Snodgrassella alvi	1196083	PRJNA339423	339423	Proteobacteria	Betaproteobacteria	2.42332	41.3	-	NAHJ01	62	2188	2103	4/13/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603565	GCA_002088555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/555/GCA_002088555.1_ASM208855v1	-	N-W7
Microbacterium sp. oral taxon 186 str. F0373	1203549	PRJNA169458	169458	Terrabacteria group	Actinobacteria	3.16806	69.2	-	ATCC01	7	3051	2914	6/14/13	4/17/17	Scaffold	Broad Institute	SAMN02596977	GCA_000411455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/455/GCA_000411455.1_Micr_sp_oral_taxon_186_F0373_V1	-	F0373
Cupriavidus sp. HMR-1	1249621	PRJNA178926	178926	Proteobacteria	Betaproteobacteria	6.64238	63.9	-	ANKP01	285	6215	5865	12/12/12	5/18/17	Contig	The University of Hong Kong	SAMN02471173	GCA_000319775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/775/GCA_000319775.1_ASM31977v1	23409271	HMR-1
Sinorhizobium sp. GL2	1358416	PRJNA211974	211974	Proteobacteria	Alphaproteobacteria	7.79338	62.1	-	AUTB01	133	7534	7427	12/7/15	12/7/15	Contig	Huazhong Agricultural University	SAMN04301589	GCA_001461715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/461/715/GCA_001461715.1_ASM146171v1	-	GL2
Wohlfahrtiimonas chitiniclastica	400946	PRJNA382997	382997	Proteobacteria	Gammaproteobacteria	2.1207	43.7	-	NEFK01	25	2027	1948	8/15/17	8/17/17	Contig	Centers for Disease Control and Prevention	SAMN06758446	GCA_002252305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/305/GCA_002252305.1_ASM225230v1	-	F6512
Thioclava sp. F42-5	1973005	PRJNA380869	380869	Proteobacteria	Alphaproteobacteria	3.92447	64	-	NBNZ01	23	3732	3649	6/30/17	7/3/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN06650522	GCA_002213195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/195/GCA_002213195.1_ASM221319v1	-	F42-5
Hyphomonas sp. TMED17	1986605	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	2.4505	54.7	-	NHBW01	15	2267	2208	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971871	GCA_002172915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/915/GCA_002172915.1_ASM217291v1	-	-
Halorubrum sp. Eb13	1383843	PRJNA232799	232799	Euryarchaeota	Halobacteria	3.6267	67.6	-	NHPE01	153	3565	3295	8/15/17	8/17/17	Scaffold	University of Conn.	SAMN02716040	GCA_002252895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/895/GCA_002252895.1_ASM225289v1	24782836	Eb13
uncultured Oscillibacter sp.	876091	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.34632	59.2	-	FMHF01	13	3195	3143	8/16/16	8/16/16	Scaffold	SC	SAMEA3545356	GCA_900066625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/625/GCA_900066625.1_14207_7_16	-	-
Bacteroides dorei	357276	PRJNA232731	232731	FCB group	Bacteroidetes/Chlorobi group	5.44491	42	chromosome:CP009057.1	-	1	4512	4265	8/26/15	8/26/15	Complete Genome	University of Florida	SAMN02873677	GCA_001274835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/274/835/GCA_001274835.1_ASM127483v1	-	-
Mycobacterium fortuitum	1766	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.66504	66.2	-	LZIP01	178	6588	6257	6/17/16	4/5/17	Contig	JCVI	SAMN04692022	GCA_001667345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/345/GCA_001667345.1_ASM166734v1	-	852002-51564_SCH6189132-b
Aeromonas sp. ZOR0002	1339228	PRJNA205572	205572	Proteobacteria	Gammaproteobacteria	4.57807	61.2	-	JRQJ01	407	4360	3866	12/11/14	4/10/17	Scaffold	University of Oregon	SAMN03021520	GCA_000801005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/005/GCA_000801005.1_ZOR0002.1	-	ZOR0002
Elizabethkingia meningoseptica	238	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	4.06822	36.3	-	MAGZ01	24	3720	3614	3/8/17	3/11/17	Contig	CDC	SAMN05255123	GCA_002023305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/305/GCA_002023305.1_ASM202330v1	-	CSID_3000515919
Pluralibacter gergoviae	61647	PRJNA285085	285085	Proteobacteria	Gammaproteobacteria	5.23034	59.2	-	LDZH01	75	4984	4720	6/23/15	4/3/17	Scaffold	UCSF	SAMN03737788	GCA_001038215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/215/GCA_001038215.1_ASM103821v1	-	JB83E35
Dickeya solani	1089444	PRJNA265922	265922	Proteobacteria	Gammaproteobacteria	5.10574	56.6	-	JSXD01	138	4549	4345	12/17/14	4/2/17	Contig	University of Malaya	SAMN03154071	GCA_000803195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/195/GCA_000803195.1_ASM80319v1	-	M005
Blautia sp. CAG:257	1262756	PRJEB792	206722	Terrabacteria group	Firmicutes	2.86624	43.8	-	CBBB01	153	2542	2516	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138578	GCA_000433815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/815/GCA_000433815.1_MGS257	-	-
Mucilaginibacter sp. OK098	1855297	PRJEB18401	355836	FCB group	Bacteroidetes/Chlorobi group	7.21346	41.1	-	FRCM01	23	6074	5958	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216524	GCA_900142915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/915/GCA_900142915.1_IMG-taxon_2609459642_annotated_assembly	-	OK098
Gordonia sp. 852002-50816_SCH5313054-a	1834091	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.1352	65.3	-	LZTD01	157	4704	4480	6/17/16	4/12/17	Contig	JCVI	SAMN04696147	GCA_001665745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/745/GCA_001665745.1_ASM166574v1	-	852002-50816_SCH5313054-a
Massilia sp. WF1	1406431	PRJNA285947	285947	Proteobacteria	Betaproteobacteria	6.06668	65.7	-	LELH02	35	5432	5206	6/16/15	4/17/17	Contig	Zhejiang University	SAMN03763311	GCA_001028775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/775/GCA_001028775.2_ASM102877v2	-	WF1
Pseudomonas protegens	380021	PRJNA356319	356319	Proteobacteria	Gammaproteobacteria	6.9814	63.4	-	MRUC01	7	6369	6251	12/15/16	4/6/17	Scaffold	Centro de Investigacion y de Estudios Avanzados del IPN	SAMN06111859	GCA_001904985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/985/GCA_001904985.1_ASM190498v1	-	PA25
Blastomonas sp. CCH7-E1	1768745	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	4.11308	64.2	-	LSHU01	97	3977	3823	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299417	GCA_001555865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/865/GCA_001555865.1_ASM155586v1	-	CCH7-E1
Citrobacter amalonaticus	35703	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.99276	53.3	-	NGRA01	5	4911	4675	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521900	GCA_002151695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/695/GCA_002151695.1_ASM215169v1	-	MGH151
Porphyromonas gulae	111105	PRJNA253706	253706	FCB group	Bacteroidetes/Chlorobi group	2.3356	48.7	-	JQJE01	47	2085	1916	10/27/14	4/2/17	Contig	UC Davis	SAMN03004334	GCA_000769015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/015/GCA_000769015.1_ASM76901v1	25858832	OH3161B
Streptococcus oralis subsp. tigurinus	1077464	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.93356	40.9	-	NCUE01	19	1943	1837	4/18/17	4/21/17	Contig	Slagelse Hospital	SAMN06705630	GCA_002096365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/365/GCA_002096365.1_ASM209636v1	27325438	B_003802_10
Mycoplasma sp. UBA710	1946970	PRJNA348753	348753	Terrabacteria group	Tenericutes	0.648227	23	-	DBMA01	42	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453697	GCA_002298905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/905/GCA_002298905.1_ASM229890v1	28894102	-
Raoultella ornithinolytica 2-156-04_S1_C1	1444039	PRJNA233696	233696	Proteobacteria	Gammaproteobacteria	5.68456	55.6	-	JNPC01	57	5551	5227	6/11/14	4/2/17	Contig	IGS	SAMN02680230	GCA_000703465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/465/GCA_000703465.1_ASM70346v1	-	2-156-04_S1_C1
Brochothrix thermosphacta	2756	PRJNA338887	338887	Terrabacteria group	Firmicutes	2.6422	36.2	-	MDLQ01	166	2546	2428	8/29/16	4/5/17	Contig	CSIRO Agriculture and Food; Food Safety and Stability Group	SAMN05567457	GCA_001716015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/015/GCA_001716015.1_ASM171601v1	-	Bth-7813
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.78522	58.8	-	LNWI01	69	4585	4444	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339845	GCA_001681385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/385/GCA_001681385.1_ASM168138v1	-	F3184
Curtobacterium sp. B18	95614	PRJDA69961	69961	Terrabacteria group	Actinobacteria	3.71409	71.4	-	BACZ01	798	3802	3103	12/26/12	4/17/17	Scaffold	Kazusa DNA Research Institute	SAMD00036570	GCA_000333375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/375/GCA_000333375.1_ASM33337v1	-	B18
Streptomyces rimosus subsp. rimosus	132474	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.73441	72	-	JOCP01	137	7636	7263	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645422	GCA_000718895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/895/GCA_000718895.1_ASM71889v1	-	NRRL WC-3880
Butyrivibrio sp. XBB1001	1280682	PRJNA185724	185724	Terrabacteria group	Firmicutes	3.912	40.5	-	AUKA01	39	3396	3266	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440821	GCA_000424505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/505/GCA_000424505.1_ASM42450v1	-	XBB1001
Ensifer sp. USDA 6670	936134	PRJNA195752	195752	Proteobacteria	Alphaproteobacteria	6.81345	61.9	-	ATWE01	73	6664	6175	7/9/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440578	GCA_000421085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/085/GCA_000421085.1_ASM42108v1	-	USDA 6670
Lysobacter sp. Root494	1736549	PRJNA297942	297942	Proteobacteria	Gammaproteobacteria	3.44132	65.3	-	LMFH01	12	3123	3042	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04155818	GCA_001427225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/225/GCA_001427225.1_Root494	26633631	Root494
Leifsonia sp. 109	1150399	PRJNA188330	188330	Terrabacteria group	Actinobacteria	4.05376	69.8	-	AQYK01	5	3872	3806	4/23/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02440421	GCA_000380665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/665/GCA_000380665.1_ASM38066v1	-	109
Sphingopyxis sp. C-1	262667	PRJDB3313	287229	Proteobacteria	Alphaproteobacteria	4.58309	63.7	-	BBRO01	2	4297	4200	6/16/15	4/16/17	Contig	Akita Prefectural University	SAMD00022976	GCA_001047015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/015/GCA_001047015.1_ASM104701v1	26227601	C-1
Pseudomonas denitrificans (nomen rejiciendum)	43306	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.91171	66	-	JVDY01	198	6621	6327	7/10/15	5/30/17	Scaffold	University of Washington	SAMN03197712	GCA_001063615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/615/GCA_001063615.1_ASM106361v1	26230489	518_PDEN
Helicobacter sp. MIT 11-5569	1548151	PRJNA261711	261711	Proteobacteria	delta/epsilon subdivisions	2.02419	34.6	-	JRPB01	83	2139	1970	10/10/14	4/9/17	Scaffold	Massachusetts Institute of Technology	SAMN03075560	GCA_000765695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/695/GCA_000765695.1_ASM76569v1	25428971	MIT 11-5569
Bordetella hinzii LMG 13501	398518	PRJNA310373	310373	Proteobacteria	Betaproteobacteria	4.9936	67.1	-	LRUJ01	87	4757	4600	2/3/16	4/4/17	Contig	Pennsylvania State University	SAMN04451659	GCA_001548475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/475/GCA_001548475.1_ASM154847v1	-	LMG 13501
Faecalibacterium sp. UBA1360	1946503	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.16322	63.7	-	DBRU01	120	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06456418	GCA_002306375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/375/GCA_002306375.1_ASM230637v1	28894102	-
Vibrio owensii	696485	PRJNA302718	302718	Proteobacteria	Gammaproteobacteria	5.80893	45.6	-	LNQY01	54	5329	5114	2/10/16	4/4/17	Contig	University of Cambridge	SAMN04279320	GCA_001557965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/965/GCA_001557965.1_ASM155796v1	-	NCCB 76037
Roseburia sp. CAG:303	1262944	PRJEB820	206839	Terrabacteria group	Firmicutes	2.70571	40.9	-	CBJD01	111	2430	2401	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138772	GCA_000437755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/755/GCA_000437755.1_MGS303	-	-
Pantoea dispersa	59814	PRJNA286066	286066	Proteobacteria	Gammaproteobacteria	4.44488	58	-	LEKX01	8097	-	-	6/24/15	6/24/15	Contig	SaurashtraUniversity	SAMN03764500	GCA_001039305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/305/GCA_001039305.1_ASM103930v1	-	SUBG008
Kandleria vitulina	1630	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.6063	35.2	-	DGWP01	171	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451184	GCA_002396185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/185/GCA_002396185.1_ASM239618v1	28894102	-
Pseudobutyrivibrio sp. JW11	1855302	PRJEB17175	351353	Terrabacteria group	Firmicutes	3.06173	38.9	-	FOWB01	35	2828	2722	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216351	GCA_900115355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/355/GCA_900115355.1_IMG-taxon_2623620483_annotated_assembly	-	JW11
Salinivibrio sp. IC202	1909451	PRJNA368686	368686	Proteobacteria	Gammaproteobacteria	3.60891	50.5	-	MUEO01	111	3339	3152	2/14/17	4/17/17	Contig	Universidad de Sevilla	SAMN06269574	GCA_001995805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/805/GCA_001995805.1_ASM199580v1	-	IC202
Staphylococcus cohnii	29382	PRJNA263233	263233	Terrabacteria group	Firmicutes	2.57947	32.3	-	JRVY01	134	2489	2339	11/10/16	4/5/17	Contig	CSIR-Institute of Microbial Technology	SAMN03097241	GCA_001876785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/785/GCA_001876785.1_ASM187678v1	-	SE4.4
Bacteroides dorei	357276	PRJNA232731	232731	FCB group	Bacteroidetes/Chlorobi group	5.72909	42	chromosome:CP007619.1	-	1	4713	4519	8/6/14	8/6/14	Complete Genome	University of Florida	SAMN02679092	GCA_000738045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/045/GCA_000738045.1_ASM73804v1	-	-
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.55253	34.9	-	LZHB01	89	2493	2343	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179606	GCA_001690345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/345/GCA_001690345.1_ASM169034v1	-	Gris3-2
Lysinibacillus sp. SG8	1500274	PRJEB16041	348489	Terrabacteria group	Firmicutes	4.71524	37.3	-	FMUG01	36	4656	4437	10/17/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02787108	GCA_900101005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/005/GCA_900101005.1_IMG-taxon_2585428098_annotated_assembly	-	SG8
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.09371	42.1	-	FTQI01	5	975	906	3/18/17	3/24/17	Contig	Functional Genomics Genter Zurich	SAMEA4555926	GCA_900149445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/445/GCA_900149445.1_9-25a	-	-
Lactobacillus kunkeei	148814	PRJNA270966	270966	Terrabacteria group	Firmicutes	1.56964	37	-	JXCZ01	47	1480	1395	9/11/15	4/4/17	Contig	Uppsala university	SAMN03275717	GCA_001281215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/215/GCA_001281215.1_ASM128121v1	25953738	LAla
Devosia sp. S37	1770058	PRJNA314553	314553	Proteobacteria	Alphaproteobacteria	3.87815	64.1	-	LVVY01	151	3768	3645	5/23/16	4/12/17	Contig	University of Malaya	SAMN04413744	GCA_001650025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/025/GCA_001650025.1_De_novo	-	S37
Bosea sp. WAO	406341	PRJNA243637	243637	Proteobacteria	Alphaproteobacteria	6.12578	66.8	-	JXTJ01	42	5684	5566	1/8/16	4/16/17	Contig	Rutgers Universtiy	SAMN03295392	GCA_001509835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/835/GCA_001509835.1_ASM150983v1	-	WAO
Hymenobacter sp. CRA2	1955620	PRJNA373822	373822	FCB group	Bacteroidetes/Chlorobi group	5.87952	62.8	-	MVBC01	45	4893	4787	2/27/17	3/2/17	Scaffold	"Centre for Microbial Ecology and Genomics, University of Pretoria,"	SAMN06315040	GCA_002007105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/105/GCA_002007105.1_ASM200710v1	-	CRA2
Vibrio metoecus	1481663	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.92419	46.9	-	NMSK01	71	3749	3569	8/31/17	9/2/17	Scaffold	University of Alberta	SAMN07350498	GCA_002283835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/835/GCA_002283835.1_ASM228383v1	-	OYP9C12
Sulfuricurvum sp. RIFOXYD2_FULL_44_160	1802249	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.17606	43.9	-	MIBV01	419	2438	2088	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314705	GCA_001830745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/745/GCA_001830745.1_ASM183074v1	27774985	-
Klebsiella michiganensis	1134687	PRJNA201942	201942	Proteobacteria	Gammaproteobacteria	6.36398	55.4	-	JCNZ01	9	6294	5961	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138567	GCA_000567805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/805/GCA_000567805.1_Kleb_oxyt_MGH_27_V1	-	MGH 27
Achromobacter sp. LC458	1120623	PRJNA281681	281681	Proteobacteria	Betaproteobacteria	6.58756	64.6	-	LBHW01	106	6049	5795	5/11/15	4/10/17	Contig	Monash University Malaysia	SAMN03493437	GCA_001005835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/835/GCA_001005835.1_ASM100583v1	-	LC458
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	6.91973	44.2	-	MPTF01	118	6068	5912	1/18/17	4/6/17	Contig	Cornell University	SAMN05772536	GCA_001954495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/495/GCA_001954495.1_ASM195449v1	-	FSL H8-0069
Elizabethkingia miricola	172045	PRJEB14302	358788	FCB group	Bacteroidetes/Chlorobi group	4.15085	35.9	-	FTRC01	132	3816	3676	1/20/17	5/31/17	Contig	INSTITUT PASTEUR	SAMEA4026803	GCA_900157035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/035/GCA_900157035.1_ASM90015703v1	-	LDVH-337.01
Bacillus aryabhattai	412384	PRJNA330776	330776	Terrabacteria group	Firmicutes	5.40303	37.8	-	MCAN01	23	5546	5334	11/1/16	4/5/17	Scaffold	Bose Institute	SAMN05425717	GCA_001858395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/395/GCA_001858395.1_ASM185839v1	-	AB211
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.37124	51.2	-	MPQY01	65	2341	2241	3/6/17	3/9/17	Contig	Harvard University	SAMN06016271	GCA_002020775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/775/GCA_002020775.1_ASM202077v1	-	-
Citrobacter braakii	57706	PRJNA383970	383970	Proteobacteria	Gammaproteobacteria	5.43057	51.7	-	NEFN01	145	5514	5156	8/1/17	8/21/17	Scaffold	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN06820760	GCA_002239605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/605/GCA_002239605.1_ASM223960v1	-	C1710
Leisingera sp. F5	1813816	PRJNA312770	312770	Proteobacteria	Alphaproteobacteria	7.81392	61.7	-	LUKH01	1488	-	-	3/17/16	3/17/16	Contig	University of East Anglia	SAMN04545891	GCA_001593695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/695/GCA_001593695.1_F5	-	-
Enterobacter ludwigii	299767	PRJEB9821	382651	Proteobacteria	Gammaproteobacteria	4.90861	54.6	-	FYBD01	26	4760	4551	6/9/17	6/21/17	Contig	JUSTUS LIEBIG UNIVERSITY	SAMEA104113918	GCA_900185895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/895/GCA_900185895.1_Enterobacter_ludwigii_DSM16688T_ERS788666	-	-
Frigoribacterium sp. JB110	1434829	PRJEB19044	374422	Terrabacteria group	Actinobacteria	3.75231	68	-	FUIA01	29	3435	3330	2/11/17	5/31/17	Contig	MICALIS	SAMEA80391418	GCA_900163665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/665/GCA_900163665.1_ASM90016366v1	-	JB110
Mycobacterium immunogenum	83262	PRJNA294421	294421	Terrabacteria group	Actinobacteria	5.75931	64	-	LJFW01	92	5843	5620	9/22/15	4/4/17	Contig	US EPA	SAMN04025500	GCA_001296405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/405/GCA_001296405.1_ASM129640v1	-	H113
Moritella viscosa	80854	PRJEB16014	348508	Proteobacteria	Gammaproteobacteria	5.08094	39.3	-	FRDV01	178	4605	4271	12/6/16	4/10/17	Contig	UNIVERSITY OF TROMSO	SAMEA4520410	GCA_900120145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/145/GCA_900120145.1_clc.v6.5.K56.01	-	-
Staphylococcus argenteus	985002	PRJNA317278	317278	Terrabacteria group	Firmicutes	2.80981	32.3	-	LWAO01	126	2829	2614	1/23/17	4/6/17	Contig	Shanghai Jiao Tong University	SAMN04604743	GCA_001969695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/695/GCA_001969695.1_ASM196969v1	-	SJTU F20419
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB5159	240550	Proteobacteria	Gammaproteobacteria	5.10972	58.2	-	CBZR01	46	5040	4832	3/6/14	2/21/17	Contig	INSTITUT PASTEUR	SAMEA3138998	GCA_000613225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/225/GCA_000613225.1_SB30_PRJEB5159	24958762	07A044
Lactobacillus acetotolerans	1600	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.32296	34.6	-	DHBO01	114	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457715	GCA_002397875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/875/GCA_002397875.1_ASM239787v1	28894102	-
Mycobacterium conceptionense	451644	PRJNA299467	299467	Terrabacteria group	Actinobacteria	6.46882	66.4	-	LQOP01	42	6230	6077	4/20/17	4/22/17	Contig	University of Trento	SAMN04216919	GCA_002102065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/065/GCA_002102065.1_ASM210206v1	-	CCUG 50187
Lactobacillus agilis	1601	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.21087	41.4	-	LUGE01	116	2249	2032	8/1/17	8/3/17	Scaffold	University of Minnesota	SAMN04498969	GCA_002237935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/935/GCA_002237935.1_ASM223793v1	-	UMNLA5
Idiomarina abyssalis	86102	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.69375	46.4	-	DFMD01	47	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457078	GCA_002375575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/575/GCA_002375575.1_ASM237557v1	28894102	-
Mycobacterium chimaera	222805	PRJNA294775	294775	Terrabacteria group	Actinobacteria	6.02078	67.7	-	LJHM01	150	5706	5407	10/6/15	4/11/17	Contig	Trinity College Dublin	SAMN04032785	GCA_001307415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/415/GCA_001307415.1_ASM130741v1	26634757	MCIMRL4
Duganella sp. CF517	1881038	PRJEB16925	351041	Proteobacteria	Betaproteobacteria	7.06112	65.1	-	FODC01	30	5956	5776	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05428959	GCA_900110275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/275/GCA_900110275.1_IMG-taxon_2684623001_annotated_assembly	-	CF517
Kocuria kristinae	37923	PRJNA317984	317984	Terrabacteria group	Actinobacteria	2.12802	71.1	-	LWGZ01	1134	1903	1114	6/8/16	6/8/16	Contig	Rhodes University	SAMN04632066	GCA_001659885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/885/GCA_001659885.1_ASM165988v1	-	RUTW4-5
Aureimonas sp. D3	1638164	PRJDB3816	300645	Proteobacteria	Alphaproteobacteria	4.97484	65.3	-	BBWM01	127	4620	4429	11/7/15	4/11/17	Contig	"Graduate School of Life Sciences, Tohoku University"	SAMD00028759	GCA_001463805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/805/GCA_001463805.1_ASM146380v1	26534993	D3
Lactobacillus parabuchneri	152331	PRJNA357007	357007	Terrabacteria group	Firmicutes	2.73832	43.3	-	MSAU01	66	2658	2489	4/18/17	4/21/17	Scaffold	University of Bern	SAMN06130975	GCA_002095645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/645/GCA_002095645.1_ASM209564v1	28261177	FAM21829
Lactobacillus taiwanensis	508451	PRJNA384810	384810	Terrabacteria group	Firmicutes	1.90917	34.2	-	NGOK01	115	1852	1661	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848420	GCA_002253325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/325/GCA_002253325.1_ASM225332v1	-	114f
Lactobacillus aviarius	1606	PRJNA316009	316009	Terrabacteria group	Firmicutes	1.6277	40.2	-	LVKH01	62	1578	1482	5/25/16	4/5/17	Scaffold	University of Minnesota	SAMN04573027	GCA_001652125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/125/GCA_001652125.1_ASM165212v1	-	UMNLAv7
Bacillus paralicheniformis	1648923	PRJNA359364	359364	Terrabacteria group	Firmicutes	4.02832	46.2	-	MYFI01	119	4082	3869	3/14/17	3/16/17	Scaffold	University of Alberta	SAMN06190353	GCA_002026335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/335/GCA_002026335.1_ASM202633v1	-	F47
Nitrospira sp. UW-LDO-02	2004994	PRJNA322674	322674	Nitrospirae	Nitrospira	3.53944	59.2	-	NIUU01	522	3674	3552	8/16/17	8/16/17	Scaffold	University of Wisconsin - Madison	SAMN07150285	GCA_002254325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/325/GCA_002254325.1_ASM225432v1	-	-
Enterobacter kobei	208224	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.87289	55	-	LECY01	30	4759	4570	6/9/15	4/3/17	Contig	JCVI	SAMN03732733	GCA_001022995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/995/GCA_001022995.1_ASM102299v1	-	GN03191
Cycloclasticus sp. P1	385025	PRJNA85601	85601	Proteobacteria	Gammaproteobacteria	2.36321	42	chromosome:NC_018697.1/CP003230.1	-	1	2294	2233	9/28/12	4/17/17	Complete Genome	The Third Institute of State Oceanic Administration (SOA)	SAMN02603953	GCA_000299965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/965/GCA_000299965.1_ASM29996v1	23144416	P1; MCCC 1A01040
Enterobacter xiangfangensis	1296536	PRJNA278425	278425	Proteobacteria	Gammaproteobacteria	4.72279	55.4	-	LDQT01	32	4534	4346	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401396	GCA_001476065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/065/GCA_001476065.1_ASM147606v1	26793183	NS80
Halothiobacillus sp. 35-54-62	1970387	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	2.45986	53.5	-	NCFS01	154	2421	2310	8/16/17	8/16/17	Scaffold	None	SAMN06622314	GCA_002281295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/295/GCA_002281295.1_ASM228129v1	-	-
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.81648	66.8	-	LOYS01	71	6205	5928	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449302	GCA_001526425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/425/GCA_001526425.1_ASM152642v1	-	MSMB1838
Burkholderia diffusa	488732	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.91825	66.4	-	LPJS01	66	6379	6083	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449597	GCA_001533155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/155/GCA_001533155.1_ASM153315v1	-	MSMB375WGS
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.58954	67.7	-	LOZP01	84	6865	6532	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449325	GCA_001527585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/585/GCA_001527585.1_ASM152758v1	-	MSMB1543
Syntrophomonas sp. DTU019	1671630	PRJNA283298	283298	Terrabacteria group	Firmicutes	2.16519	50.5	-	LFSQ01	155	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03779013	GCA_001512785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/785/GCA_001512785.1_ASM151278v1	26839589	-
Candidatus Kryptonium thompsoni	1633631	PRJEB11720	301869	FCB group	Candidatus Kryptonia	2.15011	37.3	-	CZVP01	147	2144	2104	11/11/15	11/11/15	Scaffold	DOE - Joint Genome Institute	SAMN03436090	GCA_001458575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/575/GCA_001458575.1_JGI_assembly	-	JGI-14
Porphyrobacter donghaensis	267135	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	5.88564	67	-	LSJU01	1429	-	-	2/10/16	2/10/16	Contig	Georgia Institute of Technology	SAMN04299471	GCA_001556805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/805/GCA_001556805.1_ASM155680v1	-	CCH12-G6
Enterobacter cloacae complex 'Hoffmann cluster IV'	1812935	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.61855	56.2	-	LVVI01	60	4427	4206	4/25/16	4/20/17	Contig	JCVI	SAMN04578345	GCA_001631745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/745/GCA_001631745.1_ASM163174v1	-	GN06520
Enterobacter cloacae complex 'Hoffmann cluster III'	1812934	PRJNA382335	382335	Proteobacteria	Gammaproteobacteria	4.69829	55.1	-	NIZM01	110	4580	4364	6/22/17	6/24/17	Contig	"Austrian Agency for Health and Food Safety, Vienna, Austria"	SAMN06703828	GCA_002204955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/955/GCA_002204955.1_ASM220495v1	-	2840_1
Polynucleobacter sp. 17-46-58	1970422	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	1.68151	45.5	-	NCIP01	503	2025	1832	8/16/17	8/16/17	Scaffold	None	SAMN06622239	GCA_002256855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/855/GCA_002256855.1_ASM225685v1	-	-
Oleiphilus sp. HI0067	1822243	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	4.84007	44.4	-	LWFI01	1752	4711	4052	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580782	GCA_001635735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/735/GCA_001635735.1_ASM163573v1	-	HI0067
Thalassolituus sp. UBA1503	1947652	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.35724	51.7	-	DCRB01	42	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456425	GCA_002324035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/035/GCA_002324035.1_ASM232403v1	28894102	-
Eikenella sp. NML96-A-049	1809061	PRJNA310649	310649	Proteobacteria	Betaproteobacteria	1.93025	55.7	-	LXSR01	15	1921	1732	5/19/16	4/12/17	Contig	Public Health Agency of Canada	SAMN04931642	GCA_001648495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/495/GCA_001648495.1_ASM164849v1	-	NML96-A-049
Gilliamella sp. NO12	1970459	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.52722	34.7	-	NASH01	68	2282	2197	5/16/17	5/24/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603532	GCA_002142085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/085/GCA_002142085.1_ASM214208v1	-	NO12
Lachnospira sp. UBA4342	1946723	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.86006	32	-	DGTG01	189	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454389	GCA_002394245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/245/GCA_002394245.1_ASM239424v1	28894102	-
Bacillus wiedmannii	1890302	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.38884	35.2	-	LXFT01	51	5783	5479	5/17/16	4/5/17	Contig	Cornell University	SAMN04909731	GCA_001645555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/555/GCA_001645555.1_ASM164555v1	-	FSL P4-0569
Flavonifractor sp. An4	1965634	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.21273	58.2	-	NFIL01	128	3194	2979	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473722	GCA_002161755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/755/GCA_002161755.1_ASM216175v1	-	An4
Thiobacillus sp. 65-69	1895863	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	2.962	64.8	-	MKUF01	20	2939	2862	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660574	GCA_001897705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/705/GCA_001897705.1_ASM189770v1	-	-
Bradyrhizobium canariense	255045	PRJNA355573	355573	Proteobacteria	Alphaproteobacteria	8.28751	62.9	-	NAFH01	180	7848	7364	4/24/17	8/7/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN06077195	GCA_002108865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/865/GCA_002108865.1_ASM210886v1	28729275	UBMA192
Terribacillus saccharophilus	361277	PRJEB16896	350949	Terrabacteria group	Firmicutes	3.63251	42.5	-	FOCD01	13	3684	3580	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04489762	GCA_900110015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/015/GCA_900110015.1_IMG-taxon_2636416060_annotated_assembly	-	DSM 21619
Aminobacterium sp. UBA4908	1946024	PRJNA348753	348753	Synergistetes	Synergistia	2.02879	43.7	-	DHCG01	16	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457464	GCA_002398115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/115/GCA_002398115.1_ASM239811v1	28894102	-
Fibrobacter sp. UWB8	1896207	PRJEB18204	355508	FCB group	Fibrobacteres	3.46935	50.2	-	FQVZ01	30	2859	2738	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05720760	GCA_900129525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/525/GCA_900129525.1_IMG-taxon_2700988682_annotated_assembly	-	UWB8
Archaeoglobus sp. JdFR-41	1934998	PRJNA269163	269163	Euryarchaeota	Archaeoglobi	1.75248	42.2	-	MTNC01	103	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226358	GCA_002010285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/285/GCA_002010285.1_ASM201028v1	28350381	-
Aequorivita sp. UBA3599	1947775	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.85548	37.9	-	DFMG01	213	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453357	GCA_002375625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/625/GCA_002375625.1_ASM237562v1	28894102	-
Campylobacter pinnipediorum subsp. pinnipediorum	1660067	PRJNA329203	329203	Proteobacteria	delta/epsilon subdivisions	1.66805	30.2	-	MCRL01	27	1640	1559	3/6/17	3/8/17	Contig	Utrecht University	SAMN05513628	GCA_002019915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/915/GCA_002019915.1_ASM201991v1	-	306546
Xanthomonas axonopodis pv. manihotis str. IBSBF 320	1185693	PRJNA163781	163781	Proteobacteria	Gammaproteobacteria	4.80373	65.2	-	AKDY01	121	4245	3948	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090329	GCA_000265745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/745/GCA_000265745.1_IBSBF320	22699502	IBSBF 320
Catabacter sp. UBA1260	1946242	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.22924	45.6	-	DBVQ01	100	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06455487	GCA_002308155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/155/GCA_002308155.1_ASM230815v1	28894102	-
Candidatus Microthrix sp. UBA670	1946196	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.33046	52.3	-	DBNO01	99	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455251	GCA_002299185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/185/GCA_002299185.1_ASM229918v1	28894102	-
Empedobacter sp. UBA3475	1946435	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.01631	31.6	-	DFRA01	68	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453470	GCA_002378465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/465/GCA_002378465.1_ASM237846v1	28894102	-
Gammaproteobacteria bacterium	1913989	PRJNA391950	391950	Proteobacteria	Gammaproteobacteria	4.68112	45.9	-	NVVB01	139	3922	3696	9/28/17	9/28/17	Scaffold	University of Southern California	SAMN07568888	GCA_002402085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/402/085/GCA_002402085.1_ASM240208v1	-	-
Empedobacter sp. UBA4185	1946436	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.42673	31.3	-	DFUN01	102	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450889	GCA_002379725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/725/GCA_002379725.1_ASM237972v1	28894102	-
Mageeibacillus sp. UBA4354	1946788	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.09292	46.3	-	DGSU01	205	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455768	GCA_002394055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/055/GCA_002394055.1_ASM239405v1	28894102	-
Kandleria sp. UBA4218	1946666	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.6395	37.1	-	DFTG01	58	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450691	GCA_002380215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/215/GCA_002380215.1_ASM238021v1	28894102	-
Candidatus Microthrix sp. UBA1329	1946156	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.76182	59.5	-	DBSZ01	100	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06453719	GCA_002306795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/795/GCA_002306795.1_ASM230679v1	28894102	-
Catabacter sp. UBA1262	1946243	PRJNA348753	348753	Terrabacteria group	Firmicutes	0.807432	37.4	-	DBVO01	59	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06455485	GCA_002308215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/215/GCA_002308215.1_ASM230821v1	28894102	-
Xanthomonas axonopodis pv. manihotis str. AT6B	1189616	PRJNA165201	165201	Proteobacteria	Gammaproteobacteria	4.94609	65	-	AKCX01	163	4404	4068	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090302	GCA_000265765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/765/GCA_000265765.1_AT6B	22699502	AT6B
Aequorivita sp. UBA3997	1947777	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.31559	40.8	-	DGBT01	15	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455438	GCA_002384345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/345/GCA_002384345.1_ASM238434v1	28894102	-
Archaeoglobus sp. JdFR-39	1934996	PRJNA269163	269163	Euryarchaeota	Archaeoglobi	2.27922	44.3	-	MTNA01	93	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226356	GCA_002010295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/295/GCA_002010295.1_ASM201029v1	28350381	-
Fibrobacter sp. UWH9	1896213	PRJEB18223	355487	FCB group	Fibrobacteres	3.78447	49	-	FQWP01	52	3197	3042	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05720766	GCA_900129715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/715/GCA_900129715.1_IMG-taxon_2700988686_annotated_assembly	-	UWH9
Aminobacterium sp. UBA4902	1946023	PRJNA348753	348753	Synergistetes	Synergistia	2.02695	42.7	-	DHCM01	53	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457460	GCA_002398195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/195/GCA_002398195.1_ASM239819v1	28894102	-
Bradyrhizobium canariense	255045	PRJNA355588	355588	Proteobacteria	Alphaproteobacteria	8.28877	63	-	NAFG01	183	7862	7379	4/24/17	8/7/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN06088718	GCA_002108875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/875/GCA_002108875.1_ASM210887v1	28729275	UBMA183
Thiobacillus sp. 0-1251	1895858	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	3.65832	62.3	-	MKWL01	24	3590	3507	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660632	GCA_001899305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/305/GCA_001899305.1_ASM189930v1	-	-
uncultured Flavonifractor sp.	1193534	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.89116	56.3	-	FMFR01	15	2815	2763	8/16/16	8/16/16	Scaffold	SC	SAMEA3545358	GCA_900066645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/645/GCA_900066645.1_14207_7_18	-	-
Bacillus wiedmannii	1890302	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.51319	35.1	-	NIZB01	77	5951	5567	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07205604	GCA_002200215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/215/GCA_002200215.1_ASM220021v1	-	MOD1_Bc223
Lachnospira sp. UBA4320	1946722	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.98128	37.7	-	DGUC01	83	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453634	GCA_002394565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/565/GCA_002394565.1_ASM239456v1	28894102	-
Gilliamella sp. NO14	1970457	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.52008	34.7	-	NASF01	75	2291	2194	5/16/17	5/24/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603534	GCA_002142115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/115/GCA_002142115.1_ASM214211v1	-	NO14
Lachnoclostridium sp. UBA933	1946710	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.59803	41.8	-	DBDL01	207	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451388	GCA_002293545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/545/GCA_002293545.1_ASM229354v1	28894102	-
Eikenella sp. NML97-A-109	1795833	PRJNA310649	310649	Proteobacteria	Betaproteobacteria	1.82755	55.4	-	LXSS01	13	1820	1657	5/19/16	4/12/17	Contig	Public Health Agency of Canada	SAMN04931643	GCA_001648505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/505/GCA_001648505.1_ASM164850v1	-	NML97-A-109
Thalassolituus sp. UBA2109	1947660	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.4391	55	-	DCYN01	32	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450587	GCA_002331085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/085/GCA_002331085.1_ASM233108v1	28894102	-
Oleiphilus sp. HI0068	1822244	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	4.84215	44.3	-	LWFJ01	2001	4761	3846	5/2/16	8/21/17	Contig	Massachusetts Institute of Technology	SAMN04580783	GCA_001635765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/765/GCA_001635765.1_ASM163576v1	-	HI0068
Polynucleobacter sp. 16-46-70	1970421	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	1.15523	45.6	-	NCHC01	244	1356	1232	8/16/17	8/16/17	Scaffold	None	SAMN06622278	GCA_002257105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/105/GCA_002257105.1_ASM225710v1	-	-
Enterobacter cloacae complex 'Hoffmann cluster III'	1812934	PRJNA382335	382335	Proteobacteria	Gammaproteobacteria	4.69186	55.1	-	NIZF01	148	4584	4354	6/22/17	6/24/17	Contig	"Austrian Agency for Health and Food Safety, Vienna, Austria"	SAMN06703827	GCA_002204965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/965/GCA_002204965.1_ASM220496v1	-	Q9
Enterobacter cloacae complex 'Hoffmann cluster IV'	1812935	PRJNA328896	328896	Proteobacteria	Gammaproteobacteria	5.60417	55.1	-	MBTX01	146	5646	5347	11/1/16	4/20/17	Contig	University of Malaya	SAMN05383896	GCA_001858135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/135/GCA_001858135.1_ASM185813v1	-	R8E
Candidatus Kryptonium thompsoni	1633631	PRJEB11714	301863	FCB group	Candidatus Kryptonia	2.1249	37.4	-	CZVK01	114	2054	2013	11/11/15	1/13/16	Scaffold	DOE - Joint Genome Institute	SAMN03435902	GCA_001536025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/025/GCA_001536025.1_JGI_assembly	-	JGI-6
Syntrophomonas sp. DTU018	1671629	PRJNA283298	283298	Terrabacteria group	Firmicutes	2.56304	48.3	-	LFSR01	59	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03777425	GCA_001513155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/155/GCA_001513155.1_ASM151315v1	26839589	-
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.60217	67.7	-	LOZS01	101	6901	6557	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449328	GCA_001527645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/645/GCA_001527645.1_ASM152764v1	-	MSMB1966
Burkholderia diffusa	488732	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.77848	66.4	-	LPKA01	99	6261	5934	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449606	GCA_001533185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/185/GCA_001533185.1_ASM153318v1	-	MSMB583WGS
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.83609	66.8	-	LPBS01	81	6245	5966	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449381	GCA_001526705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/705/GCA_001526705.1_ASM152670v1	-	MSMB1839WGS
Halothiobacillus sp. 39-53-45	1970388	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	2.5168	53.5	-	NCJI01	152	2482	2372	8/16/17	8/16/17	Scaffold	None	SAMN06622220	GCA_002282415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/415/GCA_002282415.1_ASM228241v1	-	-
Enterobacter xiangfangensis	1296536	PRJNA278232	278232	Proteobacteria	Gammaproteobacteria	4.70707	55.4	-	LDQU01	172	4545	4310	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401397	GCA_001476095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/095/GCA_001476095.1_ASM147609v1	26793183	RSA8
Metallosphaera cuprina Ar-4	1006006	PRJNA65497	65497	TACK group	Crenarchaeota	1.84035	42	chromosome:NC_015435.1/CP002656.1	-	1	1968	1894	4/19/11	4/17/17	Complete Genome	Environmental Microbiology Research Center (EMRC)	SAMN02603221	GCA_000204925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/925/GCA_000204925.1_ASM20492v1	21551305	Ar-4
Enterobacter kobei	208224	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.99047	55	-	LEEQ01	83	4880	4658	6/9/15	4/3/17	Contig	JCVI	SAMN03495974	GCA_001023195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/195/GCA_001023195.1_ASM102319v1	-	GN02204
Nitrospira sp. UW-LDO-01	2004993	PRJNA322674	322674	Nitrospirae	Nitrospira	3.91	54.9	-	NIUT01	230	3863	3747	8/16/17	8/16/17	Scaffold	University of Wisconsin - Madison	SAMN07150284	GCA_002254365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/365/GCA_002254365.1_ASM225436v1	-	-
Bacillus paralicheniformis	1648923	PRJNA328464	328464	Terrabacteria group	Firmicutes	4.43511	45.9	-	MBGK01	36	4413	3612	7/21/16	7/21/16	Contig	University of Westminster	SAMN05381423	GCA_001691515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/515/GCA_001691515.1_ASM169151v1	-	NCIMB 8874
Lactobacillus aviarius	1606	PRJNA316009	316009	Terrabacteria group	Firmicutes	1.6286	40.2	-	LVKI01	62	1576	1479	5/25/16	4/5/17	Scaffold	University of Minnesota	SAMN04573028	GCA_001652145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/145/GCA_001652145.1_ASM165214v1	-	UMNLAv8
Lactobacillus taiwanensis	508451	PRJNA384810	384810	Terrabacteria group	Firmicutes	1.98031	34.3	-	NGON01	118	1955	1733	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848417	GCA_002253345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/345/GCA_002253345.1_ASM225334v1	-	111w
Lactobacillus parabuchneri	152331	PRJNA357007	357007	Terrabacteria group	Firmicutes	2.76271	43.3	-	MSAV01	108	2705	2487	4/18/17	4/21/17	Scaffold	University of Bern	SAMN06130976	GCA_002095655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/655/GCA_002095655.1_ASM209565v1	28261177	FAM21834
Aureimonas sp. N4	1638165	PRJDB3816	300645	Proteobacteria	Alphaproteobacteria	4.64776	65.4	-	BBWS01	85	4400	4222	11/7/15	4/11/17	Contig	"Graduate School of Life Sciences, Tohoku University"	SAMD00028760	GCA_001463925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/925/GCA_001463925.1_ASM146392v1	26534993	N4
Duganella sp. CF458	1884368	PRJEB17279	351470	Proteobacteria	Betaproteobacteria	6.34103	62.6	-	FOOF01	61	5773	5628	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05518865	GCA_900113115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/115/GCA_900113115.1_IMG-taxon_2687453813_annotated_assembly	-	CF458
Mycobacterium chimaera	222805	PRJNA356276	356276	Terrabacteria group	Actinobacteria	6.0284	67.7	-	MRBR01	364	5836	5414	12/12/16	4/16/17	Contig	Juniata College	SAMN06111444	GCA_001901205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/205/GCA_001901205.1_ASM190120v1	-	Fl-0169
Idiomarina abyssalis	86102	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.68375	47	-	DFTL01	5	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450690	GCA_002382935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/935/GCA_002382935.1_ASM238293v1	28894102	-
Mycobacterium conceptionense	451644	PRJEB5740	239988	Terrabacteria group	Actinobacteria	6.38827	66.3	-	CTEF01	20	7176	7093	3/25/15	3/25/15	Scaffold	URMITE	SAMEA3305051	GCA_001052995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/995/GCA_001052995.1_PRJEB5740_assembly_1	-	D16
Lactobacillus acetotolerans	1600	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.19273	34.4	-	DHAU01	138	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450425	GCA_002398765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/765/GCA_002398765.1_ASM239876v1	28894102	-
Klebsiella quasipneumoniae subsp. quasipneumoniae	1667327	PRJEB6037	246006	Proteobacteria	Gammaproteobacteria	5.46574	58	-	CCDF01	65	5377	5125	5/16/14	2/21/17	Contig	INSTITUT PASTEUR	SAMEA2471851	GCA_000751755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/755/GCA_000751755.1_KQQSB11_PRJEB6037	-	01A030
Staphylococcus argenteus	985002	PRJNA317280	317280	Terrabacteria group	Firmicutes	2.78339	32.4	-	LWAQ01	89	2772	2585	1/23/17	4/6/17	Contig	Shanghai Jiao Tong University	SAMN04604745	GCA_001969715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/715/GCA_001969715.1_ASM196971v1	-	SJTU F21224
Moritella viscosa	80854	PRJEB16014	348508	Proteobacteria	Gammaproteobacteria	4.96618	39.3	-	FRDR01	161	4505	4209	12/6/16	4/11/17	Contig	UNIVERSITY OF TROMSO	SAMEA4520408	GCA_900120285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/285/GCA_900120285.1_clc.v6.5.0609139.01	-	-
Mycobacterium immunogenum	83262	PRJNA294421	294421	Terrabacteria group	Actinobacteria	5.8106	64	-	LJFU01	77	5883	5674	9/22/15	4/4/17	Contig	US EPA	SAMN04025498	GCA_001296415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/415/GCA_001296415.1_ASM129641v1	26744376	H097
Frigoribacterium sp. MCBA15_019	1898745	PRJNA342146	342146	Terrabacteria group	Actinobacteria	3.4765	71	-	MJGS01	23	3271	3168	11/2/16	4/13/17	Scaffold	Massachusetts Institute of Technology	SAMN05736493	GCA_001864945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/945/GCA_001864945.1_ASM186494v1	-	MCBA15_019
Enterobacter ludwigii	299767	PRJNA339171	339171	Proteobacteria	Gammaproteobacteria	4.81235	54.7	-	MSDM01	16	4682	4510	3/7/17	3/11/17	Scaffold	USDA	SAMN05589724	GCA_002022405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/405/GCA_002022405.1_ASM202240v1	-	A3203
Leisingera sp. UBA4491	1946748	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	4.13474	64.7	-	DGNN01	33	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450414	GCA_002388965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/965/GCA_002388965.1_ASM238896v1	28894102	-
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.43634	50.8	-	MPRA01	73	2383	2292	3/6/17	3/9/17	Contig	Harvard University	SAMN06016274	GCA_002020825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/825/GCA_002020825.1_ASM202082v1	-	-
Bacillus aryabhattai B8W22	1358420	PRJEB15758	347670	Terrabacteria group	Firmicutes	6.23109	37.3	-	FMZY01	70	6379	6079	10/20/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487777	GCA_900101665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/665/GCA_900101665.1_IMG-taxon_2623620453_annotated_assembly	-	B8W22
Elizabethkingia miricola	172045	PRJEB14302	358788	FCB group	Bacteroidetes/Chlorobi group	4.45145	35.9	-	FTQX01	25	4197	4098	1/20/17	5/31/17	Scaffold	INSTITUT PASTEUR	SAMEA50780668	GCA_900157015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/015/GCA_900157015.1_ASM90015701v1	-	-
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	7.08727	44.1	-	MPTG01	129	6243	6071	1/18/17	4/6/17	Contig	Cornell University	SAMN05772535	GCA_001954505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/505/GCA_001954505.1_ASM195450v1	-	FSL J3-0155
Achromobacter sp. KCJK1731	1847940	PRJNA319130	319130	Proteobacteria	Betaproteobacteria	6.73849	65	-	LXPX01	172	6297	6100	5/10/16	4/12/17	Contig	University of Florida	SAMN04943299	GCA_001641515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/515/GCA_001641515.1_ASM164151v1	-	KCJK1731
Klebsiella michiganensis	1134687	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	6.62817	55.7	-	LEUS01	13	6542	6168	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280222	GCA_001030755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/755/GCA_001030755.1_Kleb_oxyt_MGH87_V1	-	MGH87
Sulfuricurvum sp. 24-42-5	1970440	PRJNA379596	379596	Proteobacteria	delta/epsilon subdivisions	1.14214	42.1	-	NCHH01	500	1466	1412	8/16/17	8/16/17	Scaffold	None	SAMN06622273	GCA_002257125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/125/GCA_002257125.1_ASM225712v1	-	-
Vibrio metoecus	1481663	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	4.02733	46.9	-	NMSL01	185	3866	3657	8/31/17	9/2/17	Scaffold	University of Alberta	SAMN07350497	GCA_002283845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/845/GCA_002283845.1_ASM228384v1	-	OYP9B09
Bosea sp. BIWAKO-01	506668	PRJDB4454	342998	Proteobacteria	Alphaproteobacteria	7.32696	64.8	-	BCQA01	2	6868	6621	9/13/16	4/17/17	Contig	Akita Prefectural University	SAMD00044724	GCA_001748145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/145/GCA_001748145.1_ASM174814v1	27881541	BIWAKO-01
Devosia sp. YR412	1881030	PRJEB16977	351125	Proteobacteria	Alphaproteobacteria	3.83121	62.5	-	FOFL01	11	3731	3632	10/29/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428969	GCA_900110945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/945/GCA_900110945.1_IMG-taxon_2690315612_annotated_assembly	-	YR412
Lactobacillus kunkeei DSM 12361 = ATCC 700308	1423768	PRJNA270974	270974	Terrabacteria group	Firmicutes	1.51571	36.4	-	JXDB01	16	1429	1338	9/11/15	4/4/17	Contig	Uppsala university	SAMN03275719	GCA_001281265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/265/GCA_001281265.1_ASM128126v1	25953738	YH-15
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.09204	41.7	-	FTQN01	5	992	928	3/18/17	3/24/17	Contig	Functional Genomics Genter Zurich	SAMEA4555930	GCA_900149455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/455/GCA_900149455.1_9-29b	-	-
Lysinibacillus sp. SG9	1500276	PRJEB15739	347687	Terrabacteria group	Firmicutes	4.58643	37.7	-	FMUO01	43	4470	4240	10/17/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02787078	GCA_900101635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/635/GCA_900101635.1_IMG-taxon_2585428104_annotated_assembly	-	SG9
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.24519	34.4	-	LZHG01	77	2058	1925	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179608	GCA_001690355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/355/GCA_001690355.1_ASM169035v1	-	Choc4-2
Gardnerella vaginalis 409-05	553190	PRJNA31001	31001	Terrabacteria group	Actinobacteria	1.61755	42	chromosome:NC_013721.1/CP001849.1	-	1	1340	1252	1/7/10	3/30/17	Complete Genome	J. Craig Venter Institute	SAMN02299422	GCA_000025205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/205/GCA_000025205.1_ASM2520v1	-	409-05
Staphylococcus cohnii	29382	PRJNA263234	263234	Terrabacteria group	Firmicutes	2.58344	32.3	-	JRVZ01	98	2516	2353	11/10/16	4/5/17	Contig	CSIR-Institute of Microbial Technology	SAMN03097242	GCA_001876805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/805/GCA_001876805.1_ASM187680v1	-	SE4.5
Salinivibrio sp. AL184	1908198	PRJNA368633	368633	Proteobacteria	Gammaproteobacteria	3.44738	50.5	-	MUEK01	161	3150	3027	2/14/17	2/22/17	Contig	Universidad de Sevilla	SAMN06266618	GCA_001995845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/845/GCA_001995845.1_ASM199584v1	-	AL184
Pseudobutyrivibrio sp. UBA1225	1947296	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.75749	39.3	-	DBWZ01	95	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06451719	GCA_002309345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/345/GCA_002309345.1_ASM230934v1	28894102	-
Roseburia sp. CAG:182	1262942	PRJEB744	206598	Terrabacteria group	Firmicutes	2.66206	46.5	-	CBKT01	175	2544	2523	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138803	GCA_000438375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/375/GCA_000438375.1_MGS182	-	-
Vibrio owensii CAIM 1854 = LMG 25443	1229493	PRJNA189697	189697	Proteobacteria	Gammaproteobacteria	6.34538	45	-	JPRD01	119	6006	5703	1/14/15	4/2/17	Scaffold	Australian Institute of Marine Science	SAMN02946409	GCA_000817815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/815/GCA_000817815.1_ASM81781v1	-	DY05
Faecalibacterium sp. UBA1198	1946502	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.23838	51.2	-	DBYA01	158	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06456576	GCA_002309735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/735/GCA_002309735.1_ASM230973v1	28894102	-
Helicobacter sp. CLO-3	211	PRJNA326869	326869	Proteobacteria	delta/epsilon subdivisions	2.2454	45.2	-	MAMQ01	137	1999	1870	6/28/16	4/12/17	Scaffold	UW	SAMN05293541	GCA_001677375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/375/GCA_001677375.1_ASM167737v1	-	HMC1
Pseudomonas denitrificans (nomen rejiciendum)	43306	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.83831	66.1	-	JVMP01	801	6887	6192	7/10/15	5/30/17	Scaffold	University of Washington	SAMN03197487	GCA_001064395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/395/GCA_001064395.1_ASM106439v1	26230489	293_PDEN
Kocuria sp. UBA5001	1946674	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.76542	70.2	-	DGYR01	21	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453251	GCA_002398425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/425/GCA_002398425.1_ASM239842v1	28894102	-
Sphingopyxis sp. H085	1759070	PRJNA294421	294421	Proteobacteria	Alphaproteobacteria	5.22135	64.6	-	LNRX01	74	4978	4803	12/15/15	4/11/17	Contig	US EPA	SAMN04252883	GCA_001467385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/385/GCA_001467385.1_ASM146738v1	-	H085
Leifsonia sp. Leaf264	1736314	PRJNA297956	297956	Terrabacteria group	Actinobacteria	4.54063	67.9	-	LMMR01	11	4424	4275	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151704	GCA_001422325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/325/GCA_001422325.1_Leaf264	26633631	Leaf264
Lysobacter sp. yr284	1761791	PRJEB16598	349862	Proteobacteria	Gammaproteobacteria	6.24954	70.4	-	FNPT01	46	5010	4841	10/22/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487939	GCA_900107375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/375/GCA_900107375.1_IMG-taxon_2615840641_annotated_assembly	-	YR284
Ensifer sp. Root1298	1736449	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	7.47346	62.2	-	LMEN01	39	7025	6772	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04155718	GCA_001426365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/365/GCA_001426365.1_Root1298	26633631	Root1298
Butyrivibrio sp. FCS006	1280684	PRJNA185726	185726	Terrabacteria group	Firmicutes	3.79573	43.8	-	AUKB01	12	3303	3213	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440822	GCA_000424525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/525/GCA_000424525.1_ASM42452v1	-	FCS006
Streptomyces rimosus subsp. rimosus	132474	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.08552	72.1	-	JOES01	247	7822	7426	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645244	GCA_000719185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/185/GCA_000719185.1_ASM71918v1	-	NRRL B-2660
Curtobacterium sp. MCBA15_001	1898731	PRJNA342146	342146	Terrabacteria group	Actinobacteria	3.783	70.8	-	MJGI01	27	3557	3443	11/2/16	4/13/17	Scaffold	Massachusetts Institute of Technology	SAMN05736478	GCA_001864835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/835/GCA_001864835.1_ASM186483v1	-	MCBA15_001
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.78755	58.8	-	LNWJ01	67	4592	4454	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339847	GCA_001681405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/405/GCA_001681405.1_ASM168140v1	-	F3329
Brochothrix thermosphacta DSM 20171 = FSL F6-1036	1121126	PRJNA338887	338887	Terrabacteria group	Firmicutes	2.4943	36.4	-	MDLK01	41	2426	2324	8/29/16	4/5/17	Scaffold	CSIRO Agriculture and Food; Food Safety and Stability Group	SAMN05567448	GCA_001715655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/655/GCA_001715655.1_ASM171565v1	-	DSM 20171
Raoultella ornithinolytica 2-156-04_S1_C2	1444067	PRJNA233724	233724	Proteobacteria	Gammaproteobacteria	5.67772	55.6	-	JNPD01	47	5531	5232	6/11/14	4/2/17	Contig	IGS	SAMN02680178	GCA_000703485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/485/GCA_000703485.1_ASM70348v1	-	2-156-04_S1_C2
Streptococcus oralis subsp. tigurinus	1077464	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.85232	41.4	-	NCUC01	14	1913	1772	4/18/17	4/21/17	Scaffold	Slagelse Hospital	SAMN06705632	GCA_002096215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/215/GCA_002096215.1_ASM209621v1	27325438	OD_348934_12
Porphyromonas gulae	111105	PRJNA253616	253616	FCB group	Bacteroidetes/Chlorobi group	2.33345	48.7	-	JRFD01	53	2093	1913	10/27/14	4/2/17	Contig	UC Davis	SAMN03004269	GCA_000769095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/095/GCA_000769095.1_ASM76909v1	25858832	COT-052 OH2857
Blastomonas sp. CCH3-E3	1768742	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	4.08777	64.4	-	LSHR01	127	3993	3834	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299414	GCA_001555885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/885/GCA_001555885.1_ASM155588v1	-	CCH3-E3
Pseudomonas protegens	380021	PRJNA356317	356317	Proteobacteria	Gammaproteobacteria	6.98062	63.4	-	MRUA01	10	6372	6251	12/15/16	4/6/17	Scaffold	Centro de Investigacion y de Estudios Avanzados del IPN	SAMN06111857	GCA_001906605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/605/GCA_001906605.1_ASM190660v1	-	PA19
Massilia sp. Leaf139	1736272	PRJNA297956	297956	Proteobacteria	Betaproteobacteria	5.38736	65.3	-	LMOJ01	28	4734	4595	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151652	GCA_001424165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/165/GCA_001424165.1_Leaf139	26633631	Leaf139
Gordonia sp. 852002-50395_SCH5434458	1834090	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.00191	65.4	-	LZTC01	107	4574	4370	6/17/16	4/12/17	Contig	JCVI	SAMN04696146	GCA_001665905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/905/GCA_001665905.1_ASM166590v1	-	852002-50395_SCH5434458
Mucilaginibacter sp. 44-25	1895794	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	4.16719	43.7	-	MKTS01	16	3743	3661	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660561	GCA_001898335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/335/GCA_001898335.1_ASM189833v1	-	-
Blautia sp. CAG:52	1262758	PRJEB914	206700	Terrabacteria group	Firmicutes	2.8315	44.4	-	CBDE01	175	2489	2465	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138647	GCA_000435215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/215/GCA_000435215.1_MGS52	-	-
Dickeya solani	1089444	PRJNA272487	272487	Proteobacteria	Gammaproteobacteria	5.09412	56.4	-	JXRS01	97	4518	4125	2/3/15	4/3/17	Contig	Intercollegiate Faculty of Biotechnology University of Gdansk and Medical University of Gdansk	SAMN03283949	GCA_000831935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/935/GCA_000831935.1_ASM83193v1	25792047	IFB 0099
Pluralibacter gergoviae	61647	PRJNA285085	285085	Proteobacteria	Gammaproteobacteria	5.56374	58.9	-	LDZJ01	127	5311	5006	6/23/15	4/10/17	Scaffold	UCSF	SAMN03737802	GCA_001038285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/285/GCA_001038285.1_ASM103828v1	-	SS84A28
Elizabethkingia meningoseptica	238	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	3.88282	36.4	-	MAHE01	19	3491	3402	3/8/17	3/11/17	Contig	CDC	SAMN05256018	GCA_002023435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/435/GCA_002023435.1_ASM202343v1	-	CSID_3000516465
Aeromonas sp. ZOR0001	1339227	PRJNA205571	205571	Proteobacteria	Gammaproteobacteria	4.45737	58.7	-	JRJY01	170	4130	3865	12/11/14	4/9/17	Scaffold	University of Oregon	SAMN03021519	GCA_000801015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/015/GCA_000801015.1_ZOR0001.1	-	ZOR0001
Mycobacterium fortuitum	1766	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.92636	66	-	LZIH01	390	6813	6480	6/17/16	4/5/17	Contig	JCVI	SAMN04691950	GCA_001667445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/445/GCA_001667445.1_ASM166744v1	-	852002-51695_SCH5383401
Clostridium tyrobutyricum DSM 2637 = ATCC 25755 = JCM 11008	1121342	PRJDB1432	280257	Terrabacteria group	Firmicutes	2.52848	31.8	-	BASR01	697	-	-	4/1/15	9/16/15	Contig	Tokyo university of marine science and technology	SAMD00036756	GCA_000974305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/305/GCA_000974305.1_ASM97430v1	-	DSM 2637 = ATCC 25755 = JCM 11008
Halorubrum sp. Ea8	1383841	PRJNA232799	232799	Euryarchaeota	Halobacteria	3.74217	67.6	-	NHPF01	165	3684	3407	8/15/17	8/17/17	Scaffold	University of Conn.	SAMN02716039	GCA_002252925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/925/GCA_002252925.1_ASM225292v1	24782836	Ea8
Hyphomonas sp. 32-62-5	1970391	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.3339	62.2	-	NCDG01	1151	3017	2706	8/16/17	8/16/17	Scaffold	None	SAMN06622378	GCA_002280065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/065/GCA_002280065.1_ASM228006v1	-	-
Thioclava sp. IC9	1973007	PRJNA380871	380871	Proteobacteria	Alphaproteobacteria	4.08564	63.7	-	NBNX01	23	3910	3803	6/30/17	7/3/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN06650524	GCA_002213225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/225/GCA_002213225.1_ASM221322v1	-	IC9
Wohlfahrtiimonas chitiniclastica	400946	PRJNA382997	382997	Proteobacteria	Gammaproteobacteria	2.13611	43.6	-	NEFL01	6	2019	1958	8/15/17	8/17/17	Contig	Centers for Disease Control and Prevention	SAMN06758445	GCA_002252325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/325/GCA_002252325.1_ASM225232v1	-	ATCC 51249
Cupriavidus sp. WS	1312922	PRJNA195550	195550	Proteobacteria	Betaproteobacteria	7.89301	68.6	-	AQPL01	785	7270	6769	5/15/13	4/8/17	Contig	"College of Life Science, Zhejiang University,"	SAMN02469612	GCA_000395345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/345/GCA_000395345.1_CupWS1.0	-	WS
Microbacterium sp. URHA0036	1298860	PRJNA190817	190817	Terrabacteria group	Actinobacteria	4.03487	67.5	-	AUEM01	21	3857	3737	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440853	GCA_000425985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/985/GCA_000425985.1_ASM42598v1	-	URHA0036
Snodgrassella alvi	1196083	PRJNA339423	339423	Proteobacteria	Betaproteobacteria	2.40334	41.2	-	NAHK01	129	2162	2054	4/13/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603566	GCA_002088575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/575/GCA_002088575.1_ASM208857v1	-	N9
Xanthomonas translucens	343	PRJNA302486	302486	Proteobacteria	Gammaproteobacteria	4.4228	67.9	-	LNST01	635	4066	3412	12/3/15	4/4/17	Contig	Kansas State University	SAMN04279065	GCA_001455845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/845/GCA_001455845.1_ASM145584v1	-	XT-Rocky
Vibrio crassostreae 9ZC13	1191301	PRJNA167006	167006	Proteobacteria	Gammaproteobacteria	5.00968	44.6	-	AJYZ02	43	4443	4186	6/25/12	4/5/17	Scaffold	Broad Institute	SAMN02470442	GCA_000272045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/045/GCA_000272045.2_ASM27204v2	22955834	9ZC13
Variovorax sp. YR216	1882828	PRJEB16665	349899	Proteobacteria	Betaproteobacteria	7.37149	66.2	-	FNRO01	49	7045	6828	10/22/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444680	GCA_900107745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/745/GCA_900107745.1_IMG-taxon_2690315647_annotated_assembly	-	YR216
Mesorhizobium sp. Root552	1736555	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	4.61937	60.9	-	LMFV01	63	4493	4307	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155824	GCA_001427285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/285/GCA_001427285.1_Root552	26633631	Root552
Methylophaga sp. UBA1484	1946867	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.93283	45.5	-	DCRU01	10	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450648	GCA_002325285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/285/GCA_002325285.1_ASM232528v1	28894102	-
Cellulomonas sp. B6	1295626	PRJNA303168	303168	Terrabacteria group	Actinobacteria	4.04232	75.1	-	LNTD01	279	3693	3489	12/8/15	4/11/17	Contig	INTA	SAMN04287673	GCA_001462455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/455/GCA_001462455.1_ASM146245v1	-	B6
Chryseobacterium sp. YR485	1500294	PRJNA247536	247536	FCB group	Bacteroidetes/Chlorobi group	5.16612	36	-	JUGO01	12	4638	4539	12/9/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02787088	GCA_000799335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/335/GCA_000799335.1_ASM79933v1	-	YR485
Sulfurimonas sp. RIFCSPHIGHO2_12_FULL_36_9	1802251	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	1.8158	35.9	-	MIBX01	141	1967	1597	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315574	GCA_001830775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/775/GCA_001830775.1_ASM183077v1	27774985	-
Pedobacter heparinus DSM 2366	485917	PRJNA27949	27949	FCB group	Bacteroidetes/Chlorobi group	5.16738	42	chromosome:NC_013061.1/CP001681.1	-	1	4295	4201	8/5/09	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598456	GCA_000023825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/825/GCA_000023825.1_ASM2382v1	21304637	DSM 2366
Aeromicrobium sp. REDSEA-S44_B1	1811530	PRJNA289734	289734	Terrabacteria group	Actinobacteria	3.47292	72.1	-	LUNJ01	44	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534559	GCA_001626295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/295/GCA_001626295.1_ASM162629v1	27377622	-
Acidiphilium sp. 34-64-41	1970297	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	3.85709	63.7	-	NCJX01	180	3621	3413	8/16/17	8/16/17	Scaffold	None	SAMN06622205	GCA_002282635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/635/GCA_002282635.1_ASM228263v1	-	-
Idiomarina sp. UBA1482	1946639	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.01236	46.1	-	DCRW01	180	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450642	GCA_002325325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/325/GCA_002325325.1_ASM232532v1	28894102	-
Halomonas sp. 19A_GOM-1509m	1380377	PRJNA213765	213765	Proteobacteria	Gammaproteobacteria	5.36594	54.5	-	JIAY01	35	4962	4786	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743942	GCA_000620585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/585/GCA_000620585.1_ASM62058v1	-	19A_GOM-1509m
Pusillimonas sp. UBA4517	1947370	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	3.0676	52.9	-	DGMN01	64	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450764	GCA_002388415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/415/GCA_002388415.1_ASM238841v1	28894102	-
Sphingobium sp. Ant17	1461752	PRJNA238158	238158	Proteobacteria	Alphaproteobacteria	5.23856	62.4	-	JEMV01	199	5086	4040	3/11/14	4/9/17	Contig	University of Pretoria	SAMN02641184	GCA_000588875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/875/GCA_000588875.1_Ant17_NGen_afterQC	24723703	Ant17
Desulfosporosinus sp. BRH_c37	1734396	PRJNA257561	257561	Terrabacteria group	Firmicutes	6.23425	42	-	LOEW01	313	5652	5288	1/15/16	1/15/16	Contig	EPFL	SAMN04126958	GCA_001516045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/045/GCA_001516045.1_41k	-	-
Sphingobacterium sp. JB170	1434842	PRJEB19164	374440	FCB group	Bacteroidetes/Chlorobi group	4.4017	42	-	FUKU01	78	3843	3674	2/11/17	5/31/17	Contig	MICALIS	SAMEA81164668	GCA_900163865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/865/GCA_900163865.1_ASM90016386v1	-	JB170
Rothia sp. HMSC065G12	1739308	PRJNA299958	299958	Terrabacteria group	Actinobacteria	2.51226	53.7	-	LTFZ01	29	2157	2028	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477617	GCA_001811455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/455/GCA_001811455.1_ASM181145v1	-	HMSC065G12
Rhodanobacter sp. FW510-R10	1524462	PRJNA255812	255812	Proteobacteria	Gammaproteobacteria	3.9008	67.7	-	LVJU01	122	3561	3423	4/8/16	4/12/17	Contig	ENIGMA	SAMN02929142	GCA_001617435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/435/GCA_001617435.1_ASM161743v1	27048805	FW510-R10
Thiomonas sp. 20-64-5	1970453	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	2.07875	64.4	-	NCAI01	897	2470	2245	8/16/17	8/16/17	Scaffold	None	SAMN06622455	GCA_002255655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/655/GCA_002255655.1_ASM225565v1	-	-
Selenomonas sp. oral taxon 137 str. F0430	879310	PRJNA52055	52055	Terrabacteria group	Firmicutes	2.47507	56.7	-	AENV01	15	2384	2178	11/30/10	4/17/17	Contig	J. Craig Venter Institute	SAMN00116784	GCA_000183625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/625/GCA_000183625.2_ASM18362v1	-	F0430
Methanosarcina sp. A14	1860098	PRJNA324744	324744	Euryarchaeota	Methanomicrobia	4.2759	39.3	-	LZPK01	390	3643	3228	9/16/16	4/13/17	Contig	"Australian Centre for Ecogenomics, The University of Queensland"	SAMN05219188	GCA_001729375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/375/GCA_001729375.1_ASM172937v1	-	A14
Haemophilus sp. CCUG 66565	1859694	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	1.92694	38.3	-	LZOX01	18	1896	1797	7/5/16	4/13/17	Contig	TAILORED-Treatment project	SAMN05225439	GCA_001679495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/495/GCA_001679495.1_ASM167949v1	-	CCUG 66565
Pseudonocardia sp. Ae150A_Ps1	1885028	PRJNA336229	336229	Terrabacteria group	Actinobacteria	6.38887	73.7	-	MCIJ01	8	5965	5545	1/4/17	4/17/17	Scaffold	University of East Anglia	SAMN05505620	GCA_001932315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/315/GCA_001932315.1_ASM193231v1	-	Ae150A_Ps1
Afipia sp. NBIMC_P1-C2	1320553	PRJNA197275	197275	Proteobacteria	Alphaproteobacteria	4.99687	61.6	-	AVBL01	66	4815	4640	2/12/14	4/9/17	Contig	FDA	SAMN02951892	GCA_000568615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/615/GCA_000568615.1_NBIMC_P1-C2	24367538	NBIMC_P1-C2
Alteromonas sp. Nap_26	1795869	PRJNA301966	301966	Proteobacteria	Gammaproteobacteria	4.30829	43.1	-	LSMP01	263	3740	3488	2/23/16	2/23/16	Contig	The University of Texas at Austin	SAMN04458022	GCA_001566845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/845/GCA_001566845.1_ASM156684v1	-	-
Thalassospira sp. Nap_22	1795867	PRJNA301966	301966	Proteobacteria	Alphaproteobacteria	4.22915	54.9	-	LSMN01	301	4088	3765	2/23/16	2/23/16	Contig	The University of Texas at Austin	SAMN04458017	GCA_001566805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/805/GCA_001566805.1_ASM156680v1	-	-
Collinsella sp. 60_9	1896993	PRJNA321218	321218	Terrabacteria group	Actinobacteria	1.85072	59.9	-	MNQC01	123	1748	1285	12/23/16	12/23/16	Scaffold	None	SAMN05717208	GCA_001915225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/225/GCA_001915225.1_ASM191522v1	27819664	-
Delftia sp. 13_1_20CM_4_67_18	1805105	PRJNA297196	297196	Proteobacteria	Betaproteobacteria	6.41149	66.6	-	MNIU01	53	5647	5511	12/23/16	12/23/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04327760	GCA_001919935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/919/935/GCA_001919935.1_ASM191993v1	27843720	-
Capnocytophaga sp. oral taxon 863 str. F0517	1227266	PRJNA173935	173935	FCB group	Bacteroidetes/Chlorobi group	2.72431	41.6	-	AWSR01	103	2597	2409	9/12/13	4/9/17	Scaffold	Washington University	SAMN02436819	GCA_000466425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/425/GCA_000466425.1_ASM46642v1	-	F0517
Veillonella sp. DORA_B_18_19_23	1403933	PRJNA221500	221500	Terrabacteria group	Firmicutes	0.634746	37.9	-	AZML01	514	870	870	12/16/13	12/16/13	Scaffold	"University of California, Berkeley"	SAMN02316559	GCA_000508645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/645/GCA_000508645.1_VllB_DORA_B_18_19_23_velvet_1.1	-	-
Peptoniphilus sp. KHD2	1756987	PRJEB20366	382518	Terrabacteria group	Firmicutes	1.87721	34.2	-	FXLP01	5	1780	1698	4/26/17	5/6/17	Contig	URMITE	SAMEA103970042	GCA_900176605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/605/GCA_900176605.1_PRJEB20366	-	KHD2
Bartonella sp. AR 15-3	545617	PRJNA360985	360985	Proteobacteria	Alphaproteobacteria	1.63008	35.9	-	MUYE01	2	1443	1259	3/7/17	3/10/17	Contig	University of Basel	SAMN06213875	GCA_002022445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/445/GCA_002022445.1_ASM202244v1	28338931	AR 15-3
Porphyromonas sp. CAG:1061	1262916	PRJEB684	206649	FCB group	Bacteroidetes/Chlorobi group	2.02909	47.1	-	CAXO01	156	1689	1653	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138638	GCA_000435035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/035/GCA_000435035.1_MGS1061	-	-
Neisseria sp. HMSC064E01	1715052	PRJNA296179	296179	Proteobacteria	Betaproteobacteria	2.70763	50.6	-	LTKU01	130	2716	2461	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04495796	GCA_001808875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/875/GCA_001808875.1_ASM180887v1	-	HMSC064E01
Campylobacter sp. RM8966	1895635	PRJNA341053	341053	Proteobacteria	delta/epsilon subdivisions	1.60833	32.3	-	MJLN01	62	1655	1573	5/15/17	9/19/17	Contig	USDA	SAMN05687073	GCA_002139155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/155/GCA_002139155.1_ASM213915v1	28854596	RM8966
Alistipes sp. CAG:831	1262698	PRJEB1020	206885	FCB group	Bacteroidetes/Chlorobi group	2.57105	53.6	-	CAYB01	98	2217	2179	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138526	GCA_000432775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/775/GCA_000432775.1_MGS831	-	-
Olsenella sp. An270	1965615	PRJNA377666	377666	Terrabacteria group	Actinobacteria	2.01322	67.5	-	NFJF01	14	1837	1755	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473701	GCA_002159735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/735/GCA_002159735.1_ASM215973v1	-	An270
Propionibacterium sp. HMSC069G10	1739316	PRJNA299966	299966	Terrabacteria group	Actinobacteria	2.48154	60	-	LTFR01	17	2484	2251	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477627	GCA_001811645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/645/GCA_001811645.1_ASM181164v1	-	HMSC069G10
Ralstonia sp. NFACC01	1566294	PRJEB17292	351458	Proteobacteria	Betaproteobacteria	5.36575	63.8	-	FOWV01	25	5007	4853	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159417	GCA_900115545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/545/GCA_900115545.1_IMG-taxon_2599185178_annotated_assembly	-	NFACC01
Parabacteroides sp. An277	1965619	PRJNA377666	377666	FCB group	Bacteroidetes/Chlorobi group	3.68151	46.7	-	NFJB01	101	3080	2915	5/30/17	6/12/17	Contig	Veterinary Research Institute	SAMN06473705	GCA_002159645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/645/GCA_002159645.1_ASM215964v1	-	An277
Micromonospora sp. CB01531	1718947	PRJNA293172	293172	Terrabacteria group	Actinobacteria	9.24401	71.5	-	LWLS01	148	8351	7792	12/15/16	4/17/17	Scaffold	The Scripps Research Institute	SAMN04857208	GCA_001905095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/095/GCA_001905095.1_ASM190509v1	27999165	CB01531
Actinomyces sp. oral taxon 181 str. F0379	1127690	PRJNA80239	80239	Terrabacteria group	Actinobacteria	1.90131	56	-	AMEW01	14	1679	1603	12/10/12	4/16/17	Scaffold	Washington University	SAMN02436933	GCA_000318335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/335/GCA_000318335.2_ASM31833v2	-	F0379
Desulfovibrio sp. K3S	1519643	PRJEB20450	382917	Proteobacteria	delta/epsilon subdivisions	3.96254	42.3	-	FWZU01	14	3585	3491	4/19/17	4/22/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06295933	GCA_900177375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/375/GCA_900177375.1_IMG-taxon_2708742538_annotated_assembly	-	K3S
Fusobacterium sp. CAG:815	1262901	PRJEB1015	206854	Fusobacteria	Fusobacteriia	1.83915	32.2	-	CBJW01	32	1858	1821	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138773	GCA_000437775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/775/GCA_000437775.1_MGS815	-	-
Prochlorococcus sp. SS52	1499501	PRJNA246696	246696	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.75405	36.4	-	JNBE01	22	1935	1865	9/29/14	4/9/17	Contig	MIT	SAMN02769572	GCA_000760375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/375/GCA_000760375.1_ASM76037v1	25977791	SS52
Shigella sp. FC1708	1898039	PRJNA341905	341905	Proteobacteria	Gammaproteobacteria	4.52401	50.8	-	MIIX01	644	5293	4053	9/23/16	8/8/17	Contig	Christian Medical College	SAMN05730135	GCA_001742995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/995/GCA_001742995.1_ASM174299v1	-	FC1708
Coprobacillus sp. 28_7	1896994	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.5747	28.2	-	MNSB01	240	1767	1205	12/23/16	12/23/16	Scaffold	None	SAMN05717259	GCA_001916245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/245/GCA_001916245.1_ASM191624v1	27819664	-
Exiguobacterium sp. AB2	1484479	PRJNA243308	243308	Terrabacteria group	Firmicutes	2.8535	52.9	-	JNAA01	114	2952	2815	5/27/14	4/9/17	Contig	University of Philippines - Diliman	SAMN02715501	GCA_000696055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/055/GCA_000696055.1_ExigAB2	25125654	AB2
Bacteroides sp. D20	585543	PRJNA38355	38355	FCB group	Bacteroidetes/Chlorobi group	4.48745	46.4	-	ACPT01	15	3693	3557	11/30/09	5/18/17	Scaffold	Broad Institute	SAMN02463737	GCA_000162215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/215/GCA_000162215.1_ASM16221v1	-	D20
Thioalkalivibrio sp. ALJ8	1158757	PRJNA176576	176576	Proteobacteria	Gammaproteobacteria	2.81795	66	-	ARIF01	7	2702	2598	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440999	GCA_000377385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/385/GCA_000377385.1_ASM37738v1	-	ALJ8
Ruminococcus sp. SR1/5	657323	PRJNA39149	39149	Terrabacteria group	Firmicutes	3.54561	44.2	chromosome:FP929053.1	-	1	3313	3260	3/25/10	2/27/15	Chromosome	MetaHIT	SAMEA3138351	GCA_000209835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/209/835/GCA_000209835.1_ASM20983v1	-	SR1/5
Carboxydothermus hydrogenoformans Z-2901	246194	PRJNA253	253	Terrabacteria group	Firmicutes	2.40152	42	chromosome:NC_007503.1/CP000141.1	-	1	2505	2417	10/21/05	4/17/17	Complete Genome	TIGR	SAMN02603998	GCA_000012865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/865/GCA_000012865.1_ASM1286v1	16311624	Z-2901
Thermotoga sp. 50_64	1635259	PRJNA278302	278302	Thermotogae	Thermotogae	1.97227	50	-	LGEV01	77	1955	1955	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445120	GCA_001508795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/795/GCA_001508795.1_ASM150879v1	26787827	-
Stenotrophomonas sp. MB339	1663558	PRJNA358642	358642	Proteobacteria	Gammaproteobacteria	4.89765	66.2	-	MSLW01	262	4512	4352	1/29/17	4/17/17	Contig	Fatima Jinnah Women University	SAMN06176942	GCA_001974685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/974/685/GCA_001974685.1_ASM197468v1	-	MB339
Pseudovibrio sp. W74	1735584	PRJNA298121	298121	Proteobacteria	Alphaproteobacteria	6.19072	51.3	-	LMCJ01	64	5675	5424	4/19/16	4/12/17	Scaffold	University College Cork	SAMN04147124	GCA_001623085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/085/GCA_001623085.1_ASM162308v1	27065959	W74
Pedobacter sp. ok626	1761882	PRJEB15995	348267	FCB group	Bacteroidetes/Chlorobi group	6.76397	39.4	-	FNEX01	35	5490	5358	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487898	GCA_900100435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/435/GCA_900100435.1_IMG-taxon_2609459674_annotated_assembly	-	OK626
Brevundimonas sp. Root1279	1736443	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	3.42577	69	-	LMEB01	11	3355	3260	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04155712	GCA_001425945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/945/GCA_001425945.1_Root1279	26633631	Root1279
Alcanivorax sp. HI0044	1822234	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	5.15389	58	-	LWEZ01	1990	4829	4060	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580773	GCA_001634945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/945/GCA_001634945.1_ASM163494v1	-	HI0044
Eubacterium sp. CAG:86	1262895	PRJEB1022	206887	Terrabacteria group	Firmicutes	2.44843	36.6	-	CAXC01	135	2208	2189	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138474	GCA_000431735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/735/GCA_000431735.1_MGS86	-	-
Janthinobacterium sp. HH102	1537274	PRJNA309037	309037	Proteobacteria	Betaproteobacteria	6.64549	62.4	-	LRHZ01	125	6010	5830	10/11/16	4/13/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04320687	GCA_001758625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/625/GCA_001758625.1_ASM175862v1	27833590	HH102
Geobacter sp. UBA4057	1961392	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.34337	50.8	-	DFZL01	61	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454800	GCA_002382705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/705/GCA_002382705.1_ASM238270v1	28894102	-
Caulobacter sp. CCH4-E1	1768763	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	3.92115	66.4	-	LSIV01	271	3820	3631	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299446	GCA_001556425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/425/GCA_001556425.1_ASM155642v1	-	CCH4-E1
Psychrobacter sp. Cmf 22.2	1926478	PRJNA353858	353858	Proteobacteria	Gammaproteobacteria	3.19012	42.6	-	MRYA01	100	2622	2553	12/24/16	4/16/17	Contig	Universidad de Santiago de Compostela	SAMN06020701	GCA_001921745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/921/745/GCA_001921745.1_ASM192174v1	-	Cmf 22.2
Acidovorax sp. Leaf191	1736296	PRJNA297956	297956	Proteobacteria	Betaproteobacteria	5.87019	66.8	-	LMPT01	24	5218	5056	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151676	GCA_001424425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/425/GCA_001424425.1_Leaf191	26633631	Leaf191
Marinobacter sp. MCTG268	1415754	PRJNA225842	225842	Proteobacteria	Gammaproteobacteria	4.4494	57	-	JQMK01	14	4095	3961	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02744761	GCA_000744695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/695/GCA_000744695.1_ASM74469v1	-	MCTG268
Polaribacter sp. BACL8 MAG-120419-bin8	1655556	PRJNA273799	273799	FCB group	Bacteroidetes/Chlorobi group	1.63891	39	-	LICJ01	522	1654	1344	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741986	GCA_001438225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/225/GCA_001438225.1_ASM143822v1	-	-
Sulfitobacter sp. HI0054	1822238	PRJNA305749	305749	Proteobacteria	Alphaproteobacteria	4.17473	62	-	LWFD01	555	4222	3817	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580777	GCA_001635605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/605/GCA_001635605.1_ASM163560v1	-	HI0054
Erythrobacter sp. HI0038	1822231	PRJNA305749	305749	Proteobacteria	Alphaproteobacteria	4.65654	63.2	-	LWEW01	2004	4483	3824	5/2/16	8/21/17	Contig	Massachusetts Institute of Technology	SAMN04580770	GCA_001634875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/875/GCA_001634875.1_ASM163487v1	-	HI0038
Epulopiscium sp. Nuni2H_MBin003	1884657	PRJNA294498	294498	Terrabacteria group	Firmicutes	1.85363	32.5	-	MDJN01	221	1833	1656	2/10/17	2/10/17	Scaffold	King Abdullah University of Science and Technology (KAUST)	SAMN05466592	GCA_001995005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/005/GCA_001995005.1_Nuni2H	-	-
Nocardioides sp. Root151	1736475	PRJNA297942	297942	Terrabacteria group	Actinobacteria	4.98441	69.6	-	LMGG01	11	4804	4668	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155744	GCA_001427925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/925/GCA_001427925.1_Root151	26633631	Root151
Candidatus Arthromitus sp. SFB-co	1054947	PRJNA69911	69911	Terrabacteria group	Firmicutes	1.52978	27.9	-	AFXW01	131	1609	1575	3/14/12	7/29/15	Contig	Stanford University	SAMN02471013	GCA_000252765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/765/GCA_000252765.2_ASM25276v2	-	SFB-co
Paracoccus sp. J56	935850	PRJEB20269	381717	Proteobacteria	Alphaproteobacteria	3.82072	62.9	-	FXAQ01	78	3781	3540	4/20/17	5/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02746000	GCA_900177635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/635/GCA_900177635.1_IMG-taxon_2527291701_annotated_assembly	-	J56
Herbaspirillum sp. UBA812	1946590	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	5.48732	62.1	-	DBIC01	407	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456105	GCA_002296545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/545/GCA_002296545.1_ASM229654v1	28894102	-
Methylobacterium sp. Leaf90	1736246	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	5.6712	68.3	-	LMMN01	59	5285	4991	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151626	GCA_001422265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/265/GCA_001422265.1_Leaf90	26633631	Leaf90
Citrobacter sp. MGH104	1686379	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.92593	51.9	-	LESO01	4	4849	4600	6/19/15	4/10/17	Scaffold	Broad Institute	SAMN03280164	GCA_001034485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/485/GCA_001034485.1_Citr_freu_complex_MGH104_V1	-	MGH104
Treponema sp. GWB1_62_6	1802379	PRJNA288027	288027	Spirochaetes	Spirochaetia	4.53257	60.7	-	MIDL01	278	4353	3286	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314120	GCA_001831025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/025/GCA_001831025.1_ASM183102v1	27774985	-
Arcobacter sp. UBA4038	1946049	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.07054	27	-	DGAE01	52	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455018	GCA_002382265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/265/GCA_002382265.1_ASM238226v1	28894102	-
Novosphingobium sp. ST904	1684385	PRJNA289934	289934	Proteobacteria	Alphaproteobacteria	6.26946	64.5	-	LGJH01	166	5952	4795	9/24/15	4/11/17	Contig	Hasselt University	SAMN03859969	GCA_001298105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/105/GCA_001298105.1_ASM129810v1	-	ST904
Lactobacillus sp. HMSC077C11	1715170	PRJNA296298	296298	Terrabacteria group	Firmicutes	2.89416	46.6	-	LTIR01	41	2897	2730	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477538	GCA_001809975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/975/GCA_001809975.1_ASM180997v1	-	HMSC077C11
Enterococcus sp. HMSC073E07	1739258	PRJNA299908	299908	Terrabacteria group	Firmicutes	2.85727	37.8	-	LTHO01	273	2919	2776	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477571	GCA_001810595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/595/GCA_001810595.1_ASM181059v1	-	HMSC073E07
Prevotella sp. DNF00663	1384078	PRJNA257376	257376	FCB group	Bacteroidetes/Chlorobi group	2.82521	43.8	-	LSDM01	94	2458	2328	2/8/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN04324903	GCA_001553265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/265/GCA_001553265.1_ASM155326v1	-	DNF00663
Pantoea sp. 3.5.1	1522060	PRJNA246264	246264	Proteobacteria	Gammaproteobacteria	4.96465	55.8	-	JMRT02	23	4662	4423	7/18/14	4/10/17	Contig	Kazan Federal University	SAMN02746163	GCA_000731025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/025/GCA_000731025.2_ASM73102v2	"2,656,642,026,209,660"	3.5.1
Sulfurovum sp. 28-43-6	1970444	PRJNA379596	379596	Proteobacteria	delta/epsilon subdivisions	1.34974	43	-	NCFY01	339	1513	1432	8/16/17	8/16/17	Scaffold	None	SAMN06622308	GCA_002281405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/405/GCA_002281405.1_ASM228140v1	-	-
Polaromonas sp. YR568	1855301	PRJEB17593	351942	Proteobacteria	Betaproteobacteria	4.8275	62.8	-	FPBM01	22	4526	4392	11/2/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216350	GCA_900116715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/715/GCA_900116715.1_IMG-taxon_2615840640_annotated_assembly	-	YR568
Serratia sp. ATCC 39006	104623	PRJNA202845	202845	Proteobacteria	Gammaproteobacteria	4.94479	49.2	-	AWXH01	8	4513	4304	10/30/13	4/17/17	Contig	Oak Ridge National Lab	SAMN02470747	GCA_000463345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/345/GCA_000463345.2_Serratia.strain_ATCC_39006_v1.0	24336377	ATCC 39006
Bifidobacterium sp. UBA1086	1946093	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.61627	59.5	-	DCCH01	153	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452227	GCA_002313695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/695/GCA_002313695.1_ASM231369v1	28894102	-
Archaeoglobus profundus DSM 5631	572546	PRJNA32583	32583	Euryarchaeota	Archaeoglobi	1.56342	41.9961	chromosome:NC_013741.1/CP001857.1; plasmid pArcpr01:NC_013742.1/CP001858.1	-	2	1858	1785	1/19/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00017459	GCA_000025285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/285/GCA_000025285.1_ASM2528v1	21304717	DSM 5631
Streptococcus sp. C300	563036	PRJNA38753	38753	Terrabacteria group	Firmicutes	2.0246	41.3	-	ACRJ01	20	2024	1829	1/19/11	4/17/17	Scaffold	Broad Institute	SAMN02463754	GCA_000187645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/645/GCA_000187645.1_ASM18764v1	-	C300
Bradyrhizobium sp. URHA0002	1298867	PRJNA190841	190841	Proteobacteria	Alphaproteobacteria	6.97283	62.2	-	AUES01	144	6757	6309	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440841	GCA_000426105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/105/GCA_000426105.1_ASM42610v1	-	URHA0002
Shewanella sp. cp20	1521167	PRJNA242566	242566	Proteobacteria	Gammaproteobacteria	4.47455	53.1	-	JPII01	63	3915	3707	2/3/15	4/10/17	Contig	UNSW	SAMN02904642	GCA_000832025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/025/GCA_000832025.1_ASM83202v1	25858840	cp20
Nostoc sp. 'Peltigera membranacea cyanobiont' 232	2014531	PRJNA389202	389202	Terrabacteria group	Cyanobacteria/Melainabacteria group	9.15877	41.6	-	NOLK01	397	8089	7238	8/11/17	8/15/17	Scaffold	University of Iceland	SAMN07191897	GCA_002245985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/985/GCA_002245985.1_ASM224598v1	-	232
Escherichia sp. TW09231	754327	PRJNA56125	56125	Proteobacteria	Gammaproteobacteria	4.73675	50.7	-	AEJW01	495	4971	4536	4/21/11	5/18/17	Contig	"Georgia Institute of Technology, School of Civil and Environmental Engineering"	SAMN02469839	GCA_000208465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/208/465/GCA_000208465.2_ASM20846v2	21482770	TW09231
Bacillus pumilus	1408	PRJNA335919	335919	Terrabacteria group	Firmicutes	3.71077	41.9917	chromosome:NZ_CP016784.1/CP016784.1; plasmid pPDSLzg-1:NZ_CP016785.1/CP016785.1	-	2	3824	3644	8/15/16	4/5/17	Complete Genome	Chinese Academy of Agricultural Sciences	SAMN05504558	GCA_001704975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/975/GCA_001704975.1_ASM170497v1	-	PDSLzg-1
Corynebacterium sp. KPL1857	1203564	PRJNA169444	169444	Terrabacteria group	Actinobacteria	2.48985	58.4	-	AXLV01	4	2362	2247	10/21/13	4/17/17	Scaffold	Broad Institute	SAMN02597002	GCA_000478035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/035/GCA_000478035.1_Cory_sp_KPL1857_V1	-	KPL1857
Staphylococcus sp. HMSC14C08	1581100	PRJNA269869	269869	Terrabacteria group	Firmicutes	2.48778	32.7	-	LUAK01	75	2398	2304	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03287016	GCA_001808095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/095/GCA_001808095.1_ASM180809v1	-	HMSC14C08
Enterobacter sp. MGH 24	1329828	PRJNA201939	201939	Proteobacteria	Gammaproteobacteria	4.73651	55.9	-	AYJG01	1	4570	4369	10/30/13	4/9/17	Scaffold	Broad Institute	SAMN02138564	GCA_000493015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/015/GCA_000493015.1_Ente_cloa_complex_MGH_24_V1	-	MGH 24
Rhodococcus sp. 29MFTsu3.1	1150676	PRJNA185375	185375	Terrabacteria group	Actinobacteria	5.57749	64.6	-	ARND01	57	5250	5102	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440496	GCA_000382105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/105/GCA_000382105.1_ASM38210v1	-	29MFTsu3.1
Cycloclasticus zancles 78-ME	1198232	PRJNA201013	201013	Proteobacteria	Gammaproteobacteria	2.65543	41.9834	chromosome:NC_021917.1/CP005996.1; plasmid p7ME01:NC_021918.1/CP006601.1	-	2	2574	2487	8/1/13	4/8/17	Complete Genome	C.N.R. - Institute for Coastal Marine Environment	SAMN02603046	GCA_000442595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/595/GCA_000442595.1_ASM44259v1	-	78-ME
Sphingomonas sp. URHD0057	1380389	PRJNA213777	213777	Proteobacteria	Alphaproteobacteria	2.78589	65.2	-	JIAU01	11	2835	2744	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743953	GCA_000620665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/665/GCA_000620665.1_ASM62066v1	-	URHD0057
Clostridium sp. ATCC BAA-442	649724	PRJNA38735	38735	Terrabacteria group	Firmicutes	4.41133	59.4	-	AWSS01	452	4510	4006	9/12/13	4/16/17	Scaffold	Washington University Genome Sequencing Center	SAMN02436755	GCA_000466445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/445/GCA_000466445.2_ASM46644v2	-	ATCC BAA-442
Persicobacter sp. JZB09	1085624	PRJNA297258	297258	FCB group	Bacteroidetes/Chlorobi group	8.25174	41.9283	chromosome:NZ_CP012851.1/CP012851.1; plasmid JZB09-Plasmid1:NZ_CP012852.1/CP012852.1; plasmid JZB09-Plasmid10:NZ_CP012853.1/CP012853.1; plasmid JZB09-Plasmid11:NZ_CP012854.1/CP012854.1; plasmid JZB09-Plasmid12:NZ_CP012855.1/CP012855.1; plasmid JZB09-Plasmid13:NZ_CP012856.1/CP012856.1; plasmid JZB09-Plasmid14:NZ_CP012857.1/CP012857.1; plasmid JZB09-Plasmid15:NZ_CP012858.1/CP012858.1; plasmid JZB09-Plasmid16:NZ_CP012859.1/CP012859.1; plasmid JZB09-Plasmid2:NZ_CP012860.1/CP012860.1; plasmid JZB09-Plasmid3:NZ_CP012861.1/CP012861.1; plasmid JZB09-Plasmid4:NZ_CP012862.1/CP012862.1; plasmid JZB09-Plasmid5:NZ_CP012863.1/CP012863.1; plasmid JZB09-Plasmid6:NZ_CP012864.1/CP012864.1; plasmid JZB09-Plasmid7:NZ_CP012865.1/CP012865.1; plasmid JZB09-Plasmid8:NZ_CP012866.1/CP012866.1; plasmid JZB09-Plasmid9:NZ_CP012867.1/CP012867.1	-	17	6391	6141	10/8/15	4/17/17	Complete Genome	Shandong University	SAMN04120646	GCA_001308105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/308/105/GCA_001308105.1_ASM130810v1	-	JZB09
Frankia sp. EI5c	683316	PRJNA275797	275797	Terrabacteria group	Actinobacteria	6.61844	72.2	-	LRTK01	159	5459	5092	5/4/16	4/17/17	Contig	University of New Hampshire	SAMN03353334	GCA_001636565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/565/GCA_001636565.1_ASM163656v1	-	EI5c
Flavobacterium sp. WG21	1229487	PRJNA174216	174216	FCB group	Bacteroidetes/Chlorobi group	5.19851	35.6	-	AMYW01	84	4303	4151	2/1/13	5/18/17	Contig	University of Notre Dame	SAMN02471198	GCA_000335775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/775/GCA_000335775.1_WG21.1.0	-	WG21
Klebsiella sp. HMSC16A12	1581108	PRJNA269877	269877	Proteobacteria	Gammaproteobacteria	5.36483	57.2	-	LUAP01	136	5352	5110	10/17/16	2/21/17	Scaffold	The Genome Institute at Washington University	SAMN03287029	GCA_001808265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/265/GCA_001808265.1_ASM180826v1	-	HMSC16A12
Bacillus safensis	561879	PRJNA345377	345377	Terrabacteria group	Firmicutes	3.81338	41.8	-	MKXN01	102	3913	3758	10/14/16	4/5/17	Contig	Universidad Arturo Prat	SAMN05861578	GCA_001766395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/395/GCA_001766395.1_ASM176639v1	-	RP10
Acinetobacter sp. ANC 3789	1217714	PRJNA183313	183313	Proteobacteria	Gammaproteobacteria	3.2486	41.3	-	APOY01	11	3091	2945	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01828173	GCA_000368265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/265/GCA_000368265.1_Acin_sp_ANC_3789_V1	-	ANC 3789
Oribacterium sp. UBA4289	1947018	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.13393	47.6	-	DGVH01	115	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456454	GCA_002394905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/905/GCA_002394905.1_ASM239490v1	28894102	-
Bordetella holmesii CDC-H572-BH	1331205	PRJNA202117	202117	Proteobacteria	Betaproteobacteria	3.58546	62.7	-	JFZY01	119	3579	3207	4/29/14	4/2/17	Contig	JCVI	SAMN02263920	GCA_000649005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/005/GCA_000649005.1_gbb09v01	24948754	CDC-H572-BH
Paeniclostridium sordellii	1505	PRJEB8129	277654	Terrabacteria group	Firmicutes	3.39523	27.4	-	CELJ01	26	3278	3188	3/13/15	4/4/17	Contig	WTSI	SAMEA1572113	GCA_001372475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/475/GCA_001372475.1_W2967	-	W2967
Bacteroides caccae	47678	PRJNA393727	393727	FCB group	Bacteroidetes/Chlorobi group	4.5708	41.9	chromosome:NZ_CP022412.2/CP022412.2	-	1	3743	3550	7/20/17	9/20/17	Complete Genome	University of North Carolina at Chapel Hill	SAMN07340701	GCA_002222615.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/222/615/GCA_002222615.2_ASM222261v2	-	ATCC 43185
Staphylococcus equorum	246432	PRJNA316783	316783	Terrabacteria group	Firmicutes	2.87439	33	-	LWJS01	142	2820	2696	11/10/16	4/5/17	Contig	CSIR-Institute of Microbial Technology	SAMN04590068	GCA_001876585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/585/GCA_001876585.1_ASM187658v1	-	RE2.24
Bradyrhizobium elkanii	29448	PRJNA351286	351286	Proteobacteria	Alphaproteobacteria	9.52981	63.7	-	MOXO01	1002	9386	7945	11/7/16	4/6/17	Scaffold	Univ Estadual Paulista UNESP/FCAV	SAMN05948933	GCA_001868735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/735/GCA_001868735.1_BE_33	-	TnphoA 33
Alcaligenes faecalis	511	PRJNA353361	353361	Proteobacteria	Betaproteobacteria	4.39058	56.8	-	MSZO01	72	4090	3951	5/9/17	5/22/17	Contig	New Jersey Medical School-Rutgers University	SAMN06200345	GCA_002119985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/985/GCA_002119985.1_ASM211998v1	-	GZAF2
Bacteroides ovatus V975	1379690	PRJEB4366	347308	FCB group	Bacteroidetes/Chlorobi group	6.4753	41.9	chromosome I:NZ_LT622246.1/LT622246.1	-	1	5004	4730	10/6/16	4/5/17	Complete Genome	ifr	SAMEA4392618	GCA_900095495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/495/GCA_900095495.1_B_ovatus_V975	-	V975
Serratia plymuthica	82996	PRJNA355005	355005	Proteobacteria	Gammaproteobacteria	5.33877	56.5	-	MQML01	281	5114	4846	12/9/16	4/6/17	Contig	Institute of Experimental Medicine	SAMN06059129	GCA_001896215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/215/GCA_001896215.1_ASM189621v1	-	tumat
Pseudomonas chlororaphis YL-1	1398776	PRJNA218608	218608	Proteobacteria	Gammaproteobacteria	6.80098	63.1	-	AWWJ01	82	6207	6055	12/12/13	4/2/17	Scaffold	Jiangsu Institute of Plant Protection	SAMN02352514	GCA_000512485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/485/GCA_000512485.1_PCYL_1	24482513	YL-1
Enterococcus cecorum DSM 20682 = ATCC 43198	1121864	PRJNA270385	270385	Terrabacteria group	Firmicutes	2.31652	36.4	-	JXKL01	71	2331	2231	11/25/16	4/5/17	Contig	Inner Mongolia Agricultural University	SAMN03267168	GCA_001885885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/885/GCA_001885885.1_ASM188588v1	-	DSM 20682
Vibrio cyclitrophicus 1F273	1136161	PRJNA81867	81867	Proteobacteria	Gammaproteobacteria	5.19529	43.5	-	AIDC02	237	4619	4422	3/26/12	4/5/17	Scaffold	Massachusetts Institute of Technology	SAMN02470294	GCA_000256165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/165/GCA_000256165.2_ASM25616v2	22491847	1F273
Pseudomonas fragi	296	PRJNA397499	397499	Proteobacteria	Gammaproteobacteria	5.11351	58.4	-	NQKN01	44	4808	4621	8/24/17	8/27/17	Scaffold	CSIRO Agriculture and Food	SAMN07459809	GCA_002269485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/485/GCA_002269485.1_ASM226948v1	-	F1816
Cronobacter malonaticus	413503	PRJNA257994	257994	Proteobacteria	Gammaproteobacteria	4.41056	56.9	-	JPZE01	35	4219	4017	8/20/14	4/2/17	Scaffold	"Nottingham Trent University, UK"	SAMN02981213	GCA_000742345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/345/GCA_000742345.1_ASM74234v1	-	687
Pseudoalteromonas luteoviolacea CPMOR-1	1365248	PRJNA213490	213490	Proteobacteria	Gammaproteobacteria	5.9679	42	-	AUYC01	105	5155	4990	4/22/16	4/5/17	Contig	Technical University of Denmark	SAMN02250928	GCA_001625685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/625/685/GCA_001625685.1_ASM162568v1	-	CPMOR-1
Lactobacillus curvatus	28038	PRJNA341439	341439	Terrabacteria group	Firmicutes	1.94017	41.9	chromosome:NZ_CP017124.1/CP017124.1	-	1	1994	1810	9/13/16	4/5/17	Complete Genome	World Institute of Kimchi	SAMN05722918	GCA_001723545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/545/GCA_001723545.1_ASM172354v1	-	WiKim38
Pseudomonas monteilii	76759	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.732	63.8	-	DFQO01	107	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452296	GCA_002377825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/825/GCA_002377825.1_ASM237782v1	28894102	-
Bacteroides ovatus	28116	PRJNA289334	289334	FCB group	Bacteroidetes/Chlorobi group	6.47249	41.9	chromosome:NZ_CP012938.1/CP012938.1	-	1	4996	4826	10/15/15	4/4/17	Complete Genome	Washington University in St. Louis	SAMN03852683	GCA_001314995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/995/GCA_001314995.1_ASM131499v1	26430127	ATCC 8483
Pseudomonas psychrotolerans	237610	PRJNA278257	278257	Proteobacteria	Gammaproteobacteria	5.41273	64.9	-	LDST01	174	4883	4719	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401422	GCA_001477265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/265/GCA_001477265.1_ASM147726v1	26793183	NS383
Xanthomonas arboricola	56448	PRJNA320456	320456	Proteobacteria	Gammaproteobacteria	4.75224	65.8	-	LXKK01	128	4218	3845	6/21/16	4/5/17	Contig	Instituto Nacional de Investigacion y Tecnologia Agraria y Alimentaria (INIA)	SAMN04939522	GCA_001674995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/995/GCA_001674995.1_ASM167499v1	-	CITA 124
Salinispora pacifica CNY330	1169192	PRJNA175188	175188	Terrabacteria group	Actinobacteria	5.49848	69.9	-	ARHN01	138	5126	4637	4/22/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441359	GCA_000377025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/025/GCA_000377025.1_ASM37702v1	-	CNY330
Leptospira kirschneri serovar Mozdok 1 str. Vehlefans 3	1291234	PRJNA188980	188980	Spirochaetes	Spirochaetia	4.40099	35.9	-	AOWK01	179	3995	3653	3/1/13	5/18/17	Contig	J. Craig Venter Institute	SAMN01919807	GCA_000342725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/725/GCA_000342725.1_CA_glsol062	-	Vehlefans 3
Xanthomonas vasicola	56459	PRJNA264615	264615	Proteobacteria	Gammaproteobacteria	4.92372	63.3	-	JSBW02	96	4563	3989	11/6/14	4/3/17	Contig	University of Exeter	SAMN03140148	GCA_000772705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/705/GCA_000772705.2_NCPPB2417v2	-	NCPPB 2417
Desulfitobacterium metallireducens DSM 15288	871968	PRJNA61369	61369	Terrabacteria group	Firmicutes	3.17607	41.9	chromosome:NZ_CP007032.1/CP007032.1	-	1	3086	2941	1/3/14	4/17/17	Complete Genome	JGI	SAMN02261393	GCA_000231405.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/405/GCA_000231405.3_ASM23140v3	-	853-15A
Enterococcus mundtii	53346	PRJEB17478	351673	Terrabacteria group	Firmicutes	3.24556	38.3	-	FOUC01	49	3008	2824	10/30/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487758	GCA_900114755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/755/GCA_900114755.1_IMG-taxon_2606217799_annotated_assembly	-	C2
Rhodococcus fascians A25f	1443894	PRJNA233522	233522	Terrabacteria group	Actinobacteria	5.87176	64.2	-	JMEZ01	17	5551	5404	9/30/14	4/2/17	Scaffold	Oregon State University	SAMN02569991	GCA_000760935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/935/GCA_000760935.1_R_fas_A25f	-	A25f
Flavobacterium columnare	996	PRJNA354433	354433	FCB group	Bacteroidetes/Chlorobi group	3.15937	30.5	-	MUGU01	216	2812	2640	7/12/17	7/14/17	Scaffold	FDA	SAMN06049043	GCA_002217245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/245/GCA_002217245.1_ASM221724v1	-	ATCC 23463
Campylobacter lanienae	75658	PRJNA340990	340990	Proteobacteria	delta/epsilon subdivisions	1.58524	34.6	-	MJJD01	18	1652	1574	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687010	GCA_002138485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/485/GCA_002138485.1_ASM213848v1	28854596	P0018
Acinetobacter ursingii	108980	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.35005	40	-	DCPX01	20	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452921	GCA_002323285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/285/GCA_002323285.1_ASM232328v1	28894102	-
Leclercia adecarboxylata	83655	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.16146	55.6	-	DBMX01	150	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457072	GCA_002298265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/265/GCA_002298265.1_ASM229826v1	28894102	-
Bacillus simplex	1478	PRJEB7424	263003	Terrabacteria group	Firmicutes	5.98357	40.2	-	CCXW01	8	5778	5491	11/1/14	4/4/17	Scaffold	URMITE	SAMEA2796393	GCA_900000145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/000/145/GCA_900000145.1_PRJEB7424_assembly_1	25502663	P558
Bdellovibrio exovorus JSS	1184267	PRJNA163339	163339	Proteobacteria	Oligoflexia	2.65789	41.9	chromosome:NC_020813.1/CP003537.1	-	1	2643	2597	3/25/13	4/17/17	Complete Genome	Weizmann Institute of Science	SAMN02604325	GCA_000348725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/725/GCA_000348725.1_ASM34872v1	23190728	JSS
Staphylococcus xylosus	1288	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.93128	32.5	-	LNPT01	42	2744	2664	9/28/16	4/5/17	Contig	Tufts University	SAMN04244268	GCA_001748045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/045/GCA_001748045.1_ASM174804v1	-	CHJ_154
Vibrio campbellii	680	PRJDB3039	271954	Proteobacteria	Gammaproteobacteria	5.71563	45.5	-	BBKX01	182	5257	5043	1/7/15	4/3/17	Scaffold	University of Miyazaki	SAMD00019141	GCA_000818355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/355/GCA_000818355.1_V_campbellii_051011E_1.0	25527835	CCS02
Mycobacterium chelonae	1774	PRJNA347845	347845	Terrabacteria group	Actinobacteria	5.20232	63.9	-	MLIA01	17	5111	4982	10/26/16	4/5/17	Contig	University of Georgia	SAMN05897982	GCA_001853745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/745/GCA_001853745.1_ASM185374v1	-	29191
Actinomyces naeslundii	1655	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.15981	67.5	-	MSRL01	57	2730	2557	1/18/17	4/6/17	Scaffold	King's College London	SAMN05898707	GCA_001956445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/445/GCA_001956445.1_ASM195644v1	-	CCUG 37599
Geobacillus sp. T6	1659191	PRJNA284908	284908	Terrabacteria group	Firmicutes	3.66136	51.9	-	LDNZ01	294	3792	3380	6/10/15	4/10/17	Contig	INTA	SAMN03734430	GCA_001025095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/095/GCA_001025095.1_ASM102509v1	26184933	T6
Streptococcus sobrinus TCI-77	1074061	PRJNA71891	71891	Terrabacteria group	Firmicutes	2.10651	43.5	-	AGGK01	258	2110	1888	10/6/11	3/30/17	Contig	JCVI	SAMN02436619	GCA_000227965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/965/GCA_000227965.2_SMUT1-NEX_10-77	-	TCI-77
Morganella morganii	582	PRJNA265008	265008	Proteobacteria	Gammaproteobacteria	4.1695	50.4	-	JSWU01	47	3981	3817	5/14/15	4/3/17	Contig	University of Malaya	SAMN03145039	GCA_001006565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/565/GCA_001006565.1_ASM100656v1	-	L3
Staphylococcus sciuri	1296	PRJNA339388	339388	Terrabacteria group	Firmicutes	2.76102	32.4	-	MDVU01	46	2765	2671	10/18/16	5/9/17	Contig	Masaryk University	SAMN05590270	GCA_001766775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/775/GCA_001766775.1_ASM176677v1	-	P575
Lactobacillus curvatus	28038	PRJNA343164	343164	Terrabacteria group	Firmicutes	1.80472	42	-	MKGC01	77	1845	1727	2/1/17	4/6/17	Scaffold	ETH Zurich	SAMN05717721	GCA_001981925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/925/GCA_001981925.1_ASM198192v1	-	RI-198
Selenomonas ruminantium	971	PRJEB17760	353198	Terrabacteria group	Firmicutes	2.77386	50.1	-	FPJA01	18	2666	2553	11/12/16	4/6/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910323	GCA_900119175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/175/GCA_900119175.1_IMG-taxon_2593339270_annotated_assembly	-	C3
Enterococcus hirae	1354	PRJNA342049	342049	Terrabacteria group	Firmicutes	2.86917	36.8	-	MJDR01	28	2716	2512	4/3/17	4/5/17	Contig	Lethbridge Research Centre	SAMN05735015	GCA_002077325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/325/GCA_002077325.1_ASM207732v1	28270110	F0221F 224
Burkholderia cepacia	292	PRJNA244018	244018	Proteobacteria	Betaproteobacteria	7.18213	67.2	-	JPGD01	5	6672	6334	9/23/14	4/2/17	Scaffold	Los Alamos National Laboratory	SAMN02796019	GCA_000756845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/845/GCA_000756845.1_BHW_1	25414490	DWS 37UF10B-2
Vibrio nigripulchritudo Pon4	1238445	PRJEB558	222443	Proteobacteria	Gammaproteobacteria	6.0594	45.8	-	CAOA01	149	5454	5380	10/1/13	4/3/17	Contig	Genoscope CEA	SAMEA3146332	GCA_001050675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/675/GCA_001050675.1_ASM105067v1	23739050	Pon4
Pantoea agglomerans	549	PRJNA270082	270082	Proteobacteria	Gammaproteobacteria	4.98116	55.1	-	JWLQ01	155	4717	4435	1/2/15	4/2/17	Contig	Universidad de Santiago de Chile	SAMN03262811	GCA_000814075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/075/GCA_000814075.1_ASM81407v1	27313292	LMAE-2
Mycobacterium africanum MAL010100	1354172	PRJNA211649	211649	Terrabacteria group	Actinobacteria	4.42741	65.5	-	JLAN01	17	4289	4061	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02231116	GCA_000666425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/425/GCA_000666425.1_Myco_afri_MAL010100_V1	-	MAL010100
Mycobacterium colombiense	339268	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.61773	67.5	-	LZLH01	306	5426	4986	6/17/16	4/10/17	Contig	JCVI	SAMN04634160	GCA_001673195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/195/GCA_001673195.1_ASM167319v1	-	1245197.5
Melissococcus plutonius	33970	PRJNA263546	263546	Terrabacteria group	Firmicutes	2.07252	31.1	-	JSBE01	13	1811	1611	7/7/15	4/3/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03103713	GCA_001047545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/545/GCA_001047545.1_ASM104754v1	-	60
Haemophilus haemolyticus M19107	1028802	PRJNA66571	66571	Proteobacteria	Gammaproteobacteria	1.91509	38.7	-	AFQN01	123	1762	1762	7/29/11	8/5/14	Contig	"Meningitis and Vaccine Preventable Diseases Branch, Centers for Disease Control and Prevention"	SAMN02952883	GCA_000222005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/005/GCA_000222005.2_ASM22200v2	21952546	M19107
Gallibacterium anatis	750	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.4312	39.7	-	JPXW01	80	2285	2164	11/4/14	4/2/17	Contig	University of Copenhagen	SAMN02900762	GCA_000771975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/975/GCA_000771975.1_ASM77197v1	-	1797
Leptospira noguchii	28182	PRJNA257151	257151	Spirochaetes	Spirochaetia	4.53975	35.5	-	JQRD01	551	4066	3655	2/24/16	4/11/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947898	GCA_001569205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/205/GCA_001569205.1_ASM156920v1	26833181	56190
Leptospira weilii	28184	PRJNA257145	257145	Spirochaetes	Spirochaetia	4.12988	40.8	-	JQRO01	299	4086	3670	2/24/16	4/5/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947820	GCA_001569365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/365/GCA_001569365.1_ASM156936v1	26833181	56145
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98755	64.1	-	FVBI01	28	4947	4801	3/10/17	3/18/17	Contig	SC	SAMEA2070432	GCA_900130735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/735/GCA_900130735.1_10665_3_21	-	191
Aeromonas veronii	654	PRJNA296464	296464	Proteobacteria	Gammaproteobacteria	4.53336	58.7	-	LKJP01	58	4177	3977	11/19/15	4/4/17	Contig	Texas Tech University	SAMN04099650	GCA_001446505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/505/GCA_001446505.1_ASM144650v1	26824353	TTU2014-108ASC
Chlamydia pecorum	85991	PRJNA288208	288208	PVC group	Chlamydiae	1.11502	41.1	-	LFRL01	5	986	933	4/21/16	4/5/17	Contig	University of the Sunshine Coast	SAMN03798520	GCA_001625535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/625/535/GCA_001625535.1_ASM162553v1	-	L71
Aerococcus urinae ACS-120-V-Col10a	866775	PRJNA51073	51073	Terrabacteria group	Firmicutes	2.08097	41.9	chromosome:NC_015278.1/CP002512.1	-	1	1938	1765	3/23/11	4/7/17	Complete Genome	J. Craig Venter Institute	SAMN00100756	GCA_000193205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/205/GCA_000193205.1_ASM19320v1	-	ACS-120-V-Col10a
Xanthomonas gardneri	90270	PRJNA276597	276597	Proteobacteria	Gammaproteobacteria	5.13506	63.6	-	JZKA01	236	4481	4141	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03378960	GCA_001009615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/615/GCA_001009615.1_ASM100961v1	26089818	SM795-12
Staphylococcus pseudintermedius	283734	PRJNA275881	275881	Terrabacteria group	Firmicutes	2.757	37.3	-	LAWU01	49	2691	2555	1/9/17	4/6/17	Scaffold	University of Copenhagen	SAMN03366842	GCA_001940385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/385/GCA_001940385.1_ASM194038v1	-	E104
Leuconostoc pseudomesenteroides	33968	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.9692	39	-	MPBC01	125	2062	1849	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981491	GCA_002092235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/235/GCA_002092235.1_ASM209223v1	28217118	LMGTW1
Klebsiella aerogenes UCI 28	1400141	PRJNA219278	219278	Proteobacteria	Gammaproteobacteria	5.40798	54.9	-	JCKU01	3	5317	5055	2/3/14	4/6/17	Scaffold	Broad Institute	SAMN02356608	GCA_000534235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/235/GCA_000534235.1_Ente_aero_UCI_28_V1	-	UCI 28
Streptobacillus moniliformis	34105	PRJNA319313	319313	Fusobacteria	Fusobacteriia	1.6466	26.2	-	LXKJ01	159	1547	1429	6/3/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04892886	GCA_001655925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/925/GCA_001655925.1_ASM165592v1	-	B5/1
Aeromonas caviae	648	PRJNA242225	242225	Proteobacteria	Gammaproteobacteria	4.84757	61.5	-	JOVP01	30	4343	3937	7/2/14	7/2/14	Contig	University of Malaya	SAMN02870964	GCA_000721855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/855/GCA_000721855.1_ASM72185v1	-	YL12
Xanthomonas perforans	442694	PRJNA276608	276608	Proteobacteria	Gammaproteobacteria	5.29181	64.7	-	JZUZ01	71	4801	4482	5/18/15	4/3/17	Contig	Universidade de Sao Paulo	SAMN03378973	GCA_001009705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/705/GCA_001009705.1_ASM100970v1	26089818	Xp4-20
Streptococcus cristatus	45634	PRJNA280675	280675	Terrabacteria group	Firmicutes	2.09692	42.5	-	LBCU01	370	1996	1866	3/11/16	4/5/17	Contig	University of Malaya	SAMN03481561	GCA_001589115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/589/115/GCA_001589115.1_ASM158911v1	-	LRIIBV4
Streptococcus pseudopneumoniae	257758	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.91805	39.4	-	JVKV01	120	1883	1813	7/10/15	4/3/17	Contig	University of Washington	SAMN03197533	GCA_001072375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/375/GCA_001072375.1_ASM107237v1	26230489	342_SPSE
Kingella kingae D2363	1305794	PRJEB1649	194506	Proteobacteria	Betaproteobacteria	1.99297	46.6	-	CBRW01	1	1876	1607	8/28/13	4/2/17	Scaffold	URMITE	SAMEA2272742	GCA_000469965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/965/GCA_000469965.1_D2363	-	D2363
Streptococcus parauberis	1348	PRJNA273857	273857	Terrabacteria group	Firmicutes	2.01642	35.6	-	LRBJ01	12	2072	1927	3/29/16	4/5/17	Contig	Norfolk State University	SAMN03299890	GCA_001601975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/975/GCA_001601975.1_RP_17_v1	-	RP17
Sphingobium yanoikuyae	13690	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	4.34574	64.8	-	DFUC01	33	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455643	GCA_002380285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/285/GCA_002380285.1_ASM238028v1	28894102	-
Mycoplasma hominis	2098	PRJNA353978	353978	Terrabacteria group	Tenericutes	0.633286	27.2	-	MRAX01	27	578	511	12/16/16	4/6/17	Scaffold	"Blokhina Research Institute of Epidemiology and Microbiology, Nizhny Novgorod, Russia"	SAMN06034716	GCA_001906845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/845/GCA_001906845.1_ASM190684v1	-	M57
Sinorhizobium fredii CCBAU 83753	1128335	PRJNA77219	77219	Proteobacteria	Alphaproteobacteria	6.83281	62.1	-	AJQS01	417	6828	6132	5/3/12	5/19/17	Contig	China Agricultural University	SAMN02469470	GCA_000261965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/965/GCA_000261965.1_83753	22586130	CCBAU 83753
Pyrococcus horikoshii OT3	70601	PRJNA207	207	Euryarchaeota	Thermococci	1.7385	41.9	chromosome:NC_000961.1/BA000001.2	-	1	1922	1801	7/3/01	5/10/17	Complete Genome	NITE	SAMD00061090	GCA_000011105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/105/GCA_000011105.1_ASM1110v1	9679194	OT3
Enterobacter hormaechei ATCC 49162	888063	PRJNA343410	343410	Proteobacteria	Gammaproteobacteria	4.89021	55.2	-	MKEQ01	4	4802	4539	11/10/16	4/10/17	Scaffold	Zhejiang Sci-Tech University	SAMN05787340	GCA_001875655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/655/GCA_001875655.1_ASM187565v1	-	ATCC 49162
Actinomyces oris	544580	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.2822	67.9	-	MSKR01	74	2708	2525	1/5/17	4/6/17	Scaffold	King's College London	SAMN05898723	GCA_001937505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/505/GCA_001937505.1_ASM193750v1	-	R11372
Haemophilus parainfluenzae	729	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.97596	39.3	-	JVYT01	81	1920	1827	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197171	GCA_001053035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/035/GCA_001053035.1_ASM105303v1	26230489	1209_HPAR
Agrobacterium sp. TS45	477197	PRJNA205091	205091	Proteobacteria	Alphaproteobacteria	5.64246	59.8	-	ASYC01	55	5421	5133	1/22/16	4/16/17	Contig	Huazhong Agricultural University	SAMN04395164	GCA_001526525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/525/GCA_001526525.1_ASM152652v1	-	TS45
Streptococcus parasanguinis	1318	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.22685	41.3	-	JUTV01	173	2091	2003	7/10/15	4/3/17	Contig	University of Washington	SAMN03197975	GCA_001074295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/295/GCA_001074295.1_ASM107429v1	26230489	766_SPAR
Fusobacterium necrophorum subsp. funduliforme	143387	PRJNA315619	315619	Fusobacteria	Fusobacteriia	2.3345	34.4	-	LVEA01	117	2269	2161	3/23/16	4/5/17	Contig	Aarhus University	SAMN04566686	GCA_001596485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/485/GCA_001596485.1_ASM159648v1	-	LS_1264
[Clostridium] clostridioforme	1531	PRJEB10915	297013	Terrabacteria group	Firmicutes	5.51422	49.3	-	CZAB01	202	5480	4882	10/1/15	4/4/17	Contig	SC	SAMEA3545331	GCA_001405335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/335/GCA_001405335.1_13470_2_84	-	2789STDY5834865
Citrobacter freundii UCI 31	1400136	PRJNA219281	219281	Proteobacteria	Gammaproteobacteria	5.26997	51.7	-	JAPB01	2	5235	4897	1/23/14	4/2/17	Scaffold	Broad Institute	SAMN02356611	GCA_000521965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/965/GCA_000521965.1_Citr_freu_UCI_31_V2	-	UCI 31
Leptospira santarosai str. MOR084	1049984	PRJNA74165	74165	Spirochaetes	Spirochaetia	4.13962	41.6	-	AHON02	90	4225	3785	1/24/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436420	GCA_000244735.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/735/GCA_000244735.3_gls454179v2.0	-	MOR084
Mycoplasma ovipneumoniae ATCC 29419	743968	PRJNA73257	73257	Terrabacteria group	Tenericutes	1.02109	29.2	-	AGRE01	97	762	676	1/13/17	4/6/17	Contig	Ningxia University	SAMN06227283	GCA_001951355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/355/GCA_001951355.1_ASM195135v1	-	ATCC 29419
Streptococcus gallolyticus subsp. gallolyticus	53354	PRJNA316443	316443	Terrabacteria group	Firmicutes	2.33221	37.5	-	LXFC01	30	2328	2231	6/6/16	4/5/17	Scaffold	Alliance de Recherche sur les Maladies Infectieuses Nantes-Angers (ARMINA)	SAMN04580134	GCA_001658075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/075/GCA_001658075.1_ASM165807v1	-	NTS 31307655
Lysinibacillus fusiformis	28031	PRJNA348753	348753	Terrabacteria group	Firmicutes	4.50745	37.4	-	DFOG01	29	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451056	GCA_002376675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/675/GCA_002376675.1_ASM237667v1	28894102	-
Psychrobacter sp. P2G3	1699622	PRJNA292374	292374	Proteobacteria	Gammaproteobacteria	3.36662	41.8576	chromosome:NZ_CP012529.1/CP012529.1; plasmid pPspP2G3a:NZ_CP012530.1/CP012530.1; plasmid pPspP2G3b:NZ_CP012531.1/CP012531.1; plasmid pPspP2G3c:NZ_CP012532.1/CP012532.1	-	4	2786	2679	3/3/16	4/12/17	Complete Genome	Norwegian University of Science and Technology	SAMN03975700	GCA_001593285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/285/GCA_001593285.1_ASM159328v1	26879123	P2G3
Pantoea ananatis LMG 2665	1378093	PRJNA245803	245803	Proteobacteria	Gammaproteobacteria	4.9387	53.4	-	JMJJ01	17	4650	4443	6/18/14	4/2/17	Contig	Centre for Microbial Ecology and Genomics	SAMN02740635	GCA_000710035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/035/GCA_000710035.1_PA2665v2	24884520	LMG 2665
Streptococcus anginosus SK1138	1161422	PRJNA89617	89617	Terrabacteria group	Firmicutes	1.95819	38.6	-	ALJO01	13	1931	1833	8/13/12	3/30/17	Contig	JCVI	SAMN00829139	GCA_000287595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/595/GCA_000287595.1_SanginSK1138v1.0	-	SK1138
Streptococcus constellatus subsp. pharyngis SK1060 = CCUG 46377	1035184	PRJNA67177	67177	Terrabacteria group	Firmicutes	1.96377	38	-	AFUP01	10	2510	2449	8/10/11	9/20/13	Contig	J. Craig Venter Institute	SAMN00621704	GCA_000223295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/223/295/GCA_000223295.2_ASM22329v1	-	SK1060
Staphylococcus lugdunensis	28035	PRJNA382365	382365	Terrabacteria group	Firmicutes	2.50069	33.868	chromosome:NZ_CP020768.1/CP020768.1; plasmid pVISLISI_4:NZ_CP020767.1/CP020767.1; plasmid pVISLISI_5:NZ_CP020766.1/CP020766.1	-	3	2405	2292	4/18/17	5/1/17	Chromosome	EA7290	SAMN06704792	GCA_002096975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/975/GCA_002096975.1_ASM209697v1	-	C_33
Riemerella anatipestifer RA-YM	913239	PRJNA59761	59761	FCB group	Bacteroidetes/Chlorobi group	2.1302	35	-	AENH01	29	2030	1959	12/14/10	3/30/17	Contig	Huazhong Agricultural University	SAMN02469905	GCA_000184135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/184/135/GCA_000184135.2_ASM18413v2	21183670	RA-YM
Bacillus cytotoxicus	580165	PRJNA274235	274235	Terrabacteria group	Firmicutes	4.1139	35.7	-	JYPG01	36	4319	3882	7/8/15	8/28/17	Scaffold	TU Muenchen	SAMN03325929	GCA_001050335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/335/GCA_001050335.1_ASM105033v1	26294623	CVUAS 2833
Acinetobacter pittii 42F	1147132	PRJEB4503	222618	Proteobacteria	Gammaproteobacteria	4.0919	38.7	-	CBRO02	94	4013	3787	10/24/13	4/2/17	Contig	IBUN	SAMEA3138849	GCA_000529235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/235/GCA_000529235.1_APIBUN_1	-	42F
Xanthomonas euvesicatoria	456327	PRJNA275507	275507	Proteobacteria	Gammaproteobacteria	5.35579	64.5	-	JZRV01	110	4851	4431	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03349344	GCA_001009245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/245/GCA_001009245.1_ASM100924v1	-	G4-1
Pseudomonas amygdali pv. dendropanacis	235272	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.66676	58.1	-	LJQG01	373	5286	4723	10/20/15	4/11/17	Scaffold	University of Toronto	SAMN03976281	GCA_001400435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/435/GCA_001400435.1_PdeICMP9150	-	ICMP9150
Brucella sp. F8/99	437687	PRJNA173610	173610	Proteobacteria	Alphaproteobacteria	3.31386	57.2	-	AQKT01	33	3378	3160	4/16/13	4/17/17	Scaffold	Broad Institute	SAMN00811224	GCA_000371005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/005/GCA_000371005.1_Bruc_sp_F8_99_V1	-	F8/99
Enterobacter asburiae	61645	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.84106	55.6	-	JZZG01	92	4783	4545	3/19/15	4/3/17	Contig	JCVI	SAMN03283672	GCA_000957005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/005/GCA_000957005.1_ASM95700v1	-	35642
Vibrio coralliilyticus	190893	PRJNA399049	399049	Proteobacteria	Gammaproteobacteria	5.58929	45.8	-	NRHY01	49	5154	5020	9/5/17	9/18/17	Contig	Oregon State University	SAMN07536091	GCA_002286655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/655/GCA_002286655.1_ASM228665v1	-	RE87
Methanomethylovorans hollandica DSM 15978	867904	PRJNA50749	50749	Euryarchaeota	Methanomicrobia	2.71401	41.8436	chromosome:NC_019977.1/CP003362.1; plasmid pMETHO01:NC_019972.1/CP003363.1	-	2	2632	2525	12/28/12	4/17/17	Complete Genome	JGI	SAMN02261367	GCA_000328665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/665/GCA_000328665.1_ASM32866v1	-	DSM 15978
Pediococcus acidilactici	1254	PRJNA293918	293918	Terrabacteria group	Firmicutes	1.9914	42.1	-	LJBS01	67	1982	1532	9/18/15	4/21/17	Contig	"Shin's Lab., Kyungpook National University"	SAMN04011952	GCA_001294765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/765/GCA_001294765.1_PedAciK3	-	K3
Psychrobacter sp. P11G5	1699624	PRJNA292376	292376	Proteobacteria	Gammaproteobacteria	3.51914	41.8214	chromosome:NZ_CP012533.1/CP012533.1; plasmid pPspP11G5a:NZ_CP012534.1/CP012534.1; plasmid pPspP11G5b:NZ_CP012535.1/CP012535.1; plasmid pPspP11G5c:NZ_CP012536.1/CP012536.1; plasmid pPspP11G5d:NZ_CP012537.1/CP012537.1; plasmid pPspP11G5e:NZ_CP012538.1/CP012538.1; plasmid pPspP11G5f:NZ_CP012539.1/CP012539.1; plasmid pPspP11G5g:NZ_CP012540.1/CP012540.1	-	8	2900	2781	3/3/16	4/12/17	Complete Genome	Norwegian University of Science and Technology	SAMN03975702	GCA_001593305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/305/GCA_001593305.1_ASM159330v1	26879123	P11G5
Acinetobacter lwoffii	28090	PRJEB13959	322610	Proteobacteria	Gammaproteobacteria	3.03197	43.3	-	FLLN01	12	2938	2734	5/24/16	4/5/17	Contig	JLU	SAMEA4000258	GCA_900088145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/145/GCA_900088145.1_Acinetobacter_lwoffi_F78	-	-
Pseudoalteromonas sp. BSi20311	383911	PRJDA74505	74505	Proteobacteria	Gammaproteobacteria	3.97984	40.3	-	BADU01	195	3692	3484	10/26/11	4/17/17	Contig	Shandong University	SAMD00036590	GCA_000239875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/875/GCA_000239875.2_PspBSi20311_1.0	22275105	BSi20311
Acinetobacter junii	40215	PRJNA387062	387062	Proteobacteria	Gammaproteobacteria	3.27393	38.8	-	NHRK01	115	3158	2915	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN07138956	GCA_002165245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/245/GCA_002165245.1_ASM216524v1	-	WCHAJ59
Acinetobacter johnsonii	40214	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.2554	41.5	-	DDAZ01	57	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456972	GCA_002333325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/325/GCA_002333325.1_ASM233332v1	28894102	-
Acinetobacter calcoaceticus TG19585	1221293	PRJNA172704	172704	Proteobacteria	Gammaproteobacteria	3.8109	38.6	-	AMIW01	34	3690	3542	10/2/12	3/30/17	Contig	Translational Genomics Research Institute	SAMN02471266	GCA_000302295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/295/GCA_000302295.1_ASM30229v1	-	TG19585
Pseudomonas savastanoi pv. savastanoi	360920	PRJEB6503	257927	Proteobacteria	Gammaproteobacteria	6.41511	57.9	-	CCMP01	412	6309	5545	9/6/14	4/2/17	Contig	ICGEB	SAMEA2587588	GCA_000751155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/155/GCA_000751155.1_PSV1.0	-	-
Pseudomonas syringae pv. apii	81036	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	6.0543	58.7	-	LJPR01	203	5753	5408	10/20/15	4/4/17	Scaffold	University of Toronto	SAMN03976297	GCA_001401385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/385/GCA_001401385.1_PapICMP2814	-	ICMP2814
Xanthomonas fuscans subsp. fuscans	366649	PRJNA264814	264814	Proteobacteria	Gammaproteobacteria	5.15391	64.7	-	JSEX02	183	4657	4097	11/10/14	4/3/17	Contig	University of Exeter	SAMN03142811	GCA_000786925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/925/GCA_000786925.2_NCPPB3660v2	26500625	NCPPB 3660
Achromobacter xylosoxidans	85698	PRJNA285410	285410	Proteobacteria	Betaproteobacteria	6.513	67.8	-	LDVN01	573	6168	5765	8/31/15	4/4/17	Contig	University of Queensland	SAMN03753632	GCA_001275865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/865/GCA_001275865.1_ASM127586v1	-	A12
Streptococcus oralis	1303	PRJNA304333	304333	Terrabacteria group	Firmicutes	1.95656	41.1	-	LQNZ01	26	1914	1705	3/2/16	4/5/17	Scaffold	University of Kaiserslautern	SAMN04325058	GCA_001579025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/025/GCA_001579025.1_ASM157902v1	27303717	DD27
Streptomyces griseus subsp. griseus	67263	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.42894	73.9	-	JOEN01	174	6677	6376	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645239	GCA_000721035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/035/GCA_000721035.1_ASM72103v1	-	NRRL B-2621
Acinetobacter nosocomialis	106654	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.85743	38.6	-	BBSR01	28	3700	3553	2/3/15	4/3/17	Contig	National Institute of Technology and Evaluation	SAMD00019886	GCA_000836055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/836/055/GCA_000836055.1_ASM83605v1	-	LMG 10619
Ruminococcus flavefaciens	1265	PRJEB17766	353204	Terrabacteria group	Firmicutes	3.36597	46	-	FPIP01	15	2906	2793	11/12/16	4/6/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910280	GCA_900119075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/075/GCA_900119075.1_IMG-taxon_2593339237_annotated_assembly	-	YL228
Klebsiella variicola	244366	PRJNA234149	234149	Proteobacteria	Gammaproteobacteria	5.58064	57.2	-	JMWB01	7	5529	5281	5/19/14	7/24/17	Scaffold	Broad Institute	SAMN02581282	GCA_000692995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/995/GCA_000692995.1_Kleb_pneu_BIDMC_61_V1	-	BIDMC 61
Bacillus atrophaeus 1013-1	723888	PRJNA46207	46207	Terrabacteria group	Firmicutes	4.12642	43.1	-	AEFS01	28	4213	4017	4/19/11	6/15/17	Contig	Transformational Medical Technologies Program	SAMN01816416	GCA_000204785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/785/GCA_000204785.2_ASM20478v2	21464989	1013-1
Lactobacillus iners LEAF 3008A-a	879304	PRJNA52047	52047	Terrabacteria group	Firmicutes	1.27304	32.5	-	AEKK01	25	1234	1151	11/4/10	3/30/17	Contig	J. Craig Venter Institute	SAMN00115043	GCA_000179995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/995/GCA_000179995.1_ASM17999v1	-	LEAF 3008A-a
Rhodococcus hoagii	43767	PRJNA316970	316970	Terrabacteria group	Actinobacteria	5.24339	68.7	-	LXFH01	49	4865	4739	4/4/17	6/6/17	Contig	The University of Edinburgh	SAMN04910114	GCA_002078625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/625/GCA_002078625.1_ASM207862v1	27638249	PAM1593
Acinetobacter radioresistens	40216	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.05366	41.6	-	DBLS01	26	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453691	GCA_002298825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/825/GCA_002298825.1_ASM229882v1	28894102	-
Staphylococcus warneri	1292	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.5897	32.7	-	LORQ01	3	2545	2353	12/21/15	4/4/17	Contig	US Food and Drug Administration 	SAMN03996298	GCA_001471795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/795/GCA_001471795.1_ASM147179v1	-	FDAARGOS_151
Staphylococcus capitis	29388	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.54173	32.8	-	JWED01	76	2423	2351	7/10/15	4/3/17	Contig	University of Washington	SAMN03197031	GCA_001070105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/105/GCA_001070105.1_ASM107010v1	26230489	1069_SEPI
Staphylococcus hominis	1290	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.18671	31.4	-	JUWW01	89	2120	2063	7/10/15	4/3/17	Contig	University of Washington	SAMN03197896	GCA_001073975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/975/GCA_001073975.1_ASM107397v1	26230489	692_SHAE
Lactobacillus paracasei subsp. tolerans Lpl7	1256230	PRJNA178446	178446	Terrabacteria group	Firmicutes	3.0891	46.2	-	ANKV01	91	3232	3008	6/11/13	4/1/17	Contig	Danone Research	SAMN02469714	GCA_000409835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/835/GCA_000409835.1_Lpl7v.1	23894338	Lpl7
Bifidobacterium pseudocatenulatum	28026	PRJDB4597	325619	Terrabacteria group	Actinobacteria	2.45851	56.4	-	BCYC01	59	2109	1952	6/10/16	4/5/17	Contig	Yakult Central Institute	SAMD00047613	GCA_001686045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/045/GCA_001686045.1_ASM168604v1	27340092	CA-K29a
Gardnerella vaginalis JCP8108	1261066	PRJNA181321	181321	Terrabacteria group	Actinobacteria	1.66559	41.1	-	ATJJ01	151	1458	1276	6/25/13	4/1/17	Scaffold	Washington University	SAMN02436830	GCA_000414525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/525/GCA_000414525.1_ASM41452v1	-	JCP8108
Lactobacillus ruminis	1623	PRJNA357347	357347	Terrabacteria group	Firmicutes	2.02231	43.3	-	MRYO01	83	2058	1822	3/31/17	4/26/17	Contig	Helsinki University	SAMN06140959	GCA_002076365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/365/GCA_002076365.1_ASM207636v1	28414739	GRL1172
Lactobacillus jensenii IM3	1434657	PRJNA231005	231005	Terrabacteria group	Firmicutes	1.62475	34	-	AZRE01	74	1546	1444	5/22/15	4/3/17	Scaffold	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN02438383	GCA_001012745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/745/GCA_001012745.1_IM3v1	-	IM3
Streptococcus intermedius	1338	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.06978	38	-	JVBU01	59	2058	1902	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197768	GCA_001073405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/405/GCA_001073405.1_ASM107340v1	26230489	567_SINT
Streptomyces albus subsp. albus	67257	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.2463	72.1	-	LMZE01	307	8048	7602	1/26/16	3/13/17	Contig	University of Illinois	SAMN03327484	GCA_001541145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/145/GCA_001541145.1_ASM154114v1	-	NRRL F-4371
Rothia mucilaginosa	43675	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.29265	59.5	-	JVRG01	28	1790	1706	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197366	GCA_001062855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/855/GCA_001062855.1_ASM106285v1	26230489	175_RMUC
Aggregatibacter actinomycetemcomitans serotype e str. SA2149	1434263	PRJNA230864	230864	Proteobacteria	Gammaproteobacteria	1.99982	44.7	-	AZTT01	114	2017	1858	3/23/16	4/5/17	Contig	"Bumgarner laboratory, Department of Microbiology, University of Washington"	SAMN04573010	GCA_001596225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/225/GCA_001596225.1_SA2149v1.0	-	SA2149
Lactobacillus crispatus EM-LC1	1328863	PRJNA200566	200566	Terrabacteria group	Firmicutes	1.82943	37	-	AXLM01	63	1821	1690	11/15/13	4/2/17	Contig	University College Cork	SAMN02471465	GCA_000497065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/065/GCA_000497065.1_L.crispatus1.0	24356836	EM-LC1
Brachyspira hyodysenteriae	159	PRJNA272555	272555	Spirochaetes	Spirochaetia	3.05694	27	-	JXNE01	90	2687	2556	5/26/15	4/3/17	Scaffold	Murdoch University	SAMN03283816	GCA_001012995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/995/GCA_001012995.1_ASM101299v1	26098837	B6933
Mycobacterium kansasii Z61	1451191	PRJNA235936	235936	Terrabacteria group	Actinobacteria	4.72973	64.3	-	JASX01	65	4723	4558	4/1/14	8/23/17	Contig	Zhejiang University	SAMN02592737	GCA_000611935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/935/GCA_000611935.1_Mycobacterium_kansasii_Z61	-	Z61
Pectobacterium carotovorum subsp. carotovorum	555	PRJNA258501	258501	Proteobacteria	Gammaproteobacteria	4.57414	51	-	JQHN01	118	4160	3915	9/8/14	4/2/17	Contig	Food and Environment Research Agency	SAMN02999475	GCA_000749915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/915/GCA_000749915.1_ASM74991v1	-	NCPPB 3395
Variovorax paradoxus	34073	PRJNA294421	294421	Proteobacteria	Betaproteobacteria	9.62724	69.1	-	LKTY01	397	9053	8627	10/19/15	4/11/17	Contig	US EPA	SAMN04146767	GCA_001399625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/625/GCA_001399625.1_ASM139962v1	-	H108
Streptococcus equinus	1335	PRJEB16286	348849	Terrabacteria group	Firmicutes	1.87561	36.8	-	FNJK01	21	1842	1772	10/20/16	4/5/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216347	GCA_900104225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/225/GCA_900104225.1_IMG-taxon_2651870306_annotated_assembly	-	Sb04
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.73575	47.6	-	MDZJ01	82	3434	3270	11/17/16	4/5/17	Contig	The University of Queensland	SAMN04320385	GCA_001880465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/465/GCA_001880465.1_ASM188046v1	-	87/3421-SP
Caldicellulosiruptor bescii	31899	PRJEB20916	389540	Terrabacteria group	Firmicutes	2.9466	35.2	-	FXXD01	2	2840	2609	6/9/17	6/21/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04515609	GCA_900184125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/184/125/GCA_900184125.1_IMG-taxon_2623620451_annotated_assembly	-	JWCB018
Escherichia albertii	208962	PRJDB3047	301492	Proteobacteria	Gammaproteobacteria	4.74574	49.5	-	BBVH01	112	4800	4517	11/6/15	2/25/17	Scaffold	University of Miyazaki	SAMD00026627	GCA_001514625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/625/GCA_001514625.1_ASM151462v1	26537224	94389
Mycobacterium intracellulare	1767	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.28739	68.6	-	LZJT01	146	5071	4809	6/17/16	4/5/17	Contig	JCVI	SAMN04634222	GCA_001667705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/705/GCA_001667705.1_ASM166770v1	-	E2190
Xanthomonas albilineans	29447	PRJNA270028	270028	Proteobacteria	Gammaproteobacteria	3.68727	63	-	JZII01	2	3139	2861	3/25/15	4/3/17	Contig	CIRAD	SAMN03262627	GCA_000963135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/135/GCA_000963135.1_Xal-REU209-G1	-	REU209
Arcobacter butzleri L355	1447263	PRJNA233527	233527	Proteobacteria	delta/epsilon subdivisions	2.22091	27.1	-	JAIW01	71	2250	2143	5/19/15	4/3/17	Scaffold	Agriculture and Agri-Foods Canada	SAMN02581423	GCA_001010715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/715/GCA_001010715.1_A.butzleri_L355_1.0	25947176	L355
Lactobacillus sakei	1599	PRJNA310405	310405	Terrabacteria group	Firmicutes	2.00516	41	-	LSFF01	44	2036	1923	3/16/16	4/10/17	Contig	Kyunghee University	SAMN04452063	GCA_001593065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/065/GCA_001593065.1_ASM159306v1	27174278	FBL1
Lactobacillus johnsonii	33959	PRJNA310173	310173	Terrabacteria group	Firmicutes	2.06467	34.2	-	LSNG01	49	2010	1875	2/24/16	4/4/17	Contig	Jilin University	SAMN04447977	GCA_001572665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/665/GCA_001572665.1_ASM157266v1	27313302	W1
Rhodococcus erythropolis	1833	PRJNA285438	285438	Terrabacteria group	Actinobacteria	7.18317	62.3	-	LYPG01	123	6765	6533	10/18/16	4/5/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03753852	GCA_001766885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/885/GCA_001766885.1_ASM176688v1	-	MI2
Akkermansia muciniphila	239935	PRJEB21068	396410	PVC group	Verrucomicrobia	2.85916	55.9	-	FXZL01	215	2506	2412	7/29/17	8/7/17	Scaffold	"WAGENINGEN UNIVERSITY, LABORATORY OF SYSTEMS AND SYNTHETIC BIOLOGY."	SAMEA104102609	GCA_900184885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/184/885/GCA_900184885.1_MOUSE_M89_JASPER.fasta	-	-
Clostridium butyricum	1492	PRJNA264452	264452	Terrabacteria group	Firmicutes	4.92264	28.4	-	JSEG01	70	4391	4110	11/18/14	4/21/17	Contig	The Chinese University of Hong Kong	SAMN03135098	GCA_000785185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/185/GCA_000785185.1_ASM78518v1	25540356	NOR 33234
Flavobacterium psychrophilum	96345	PRJNA256264	256264	FCB group	Bacteroidetes/Chlorobi group	2.80687	32.6	chromosome:NZ_CP010277.2/CP010277.2	-	1	2507	2391	4/13/15	4/10/17	Chromosome	University of Copenhagen	SAMN02941923	GCA_000971685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/685/GCA_000971685.2_ASM97168v2	-	VQ50
Lysinibacillus sphaericus	1421	PRJNA253083	253083	Terrabacteria group	Firmicutes	4.51676	37.2	-	JPDJ01	213	4399	4208	7/25/14	4/2/17	Scaffold	"Wuhan Institute of Virology, Chinese Academy of Sciences"	SAMN02866503	GCA_000733505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/505/GCA_000733505.1_ASM73350v1	-	2297
Finegoldia magna	1260	PRJNA383659	383659	Terrabacteria group	Firmicutes	1.8388	31.9	-	NDYD01	42	1769	1664	8/7/17	8/9/17	Contig	Aarhus University	SAMN06769907	GCA_002243135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/135/GCA_002243135.1_ASM224313v1	-	12T306
Campylobacter concisus	199	PRJNA273422	273422	Proteobacteria	delta/epsilon subdivisions	1.83517	37.5	-	LVXF01	42	1873	1760	4/13/17	4/17/17	Contig	RMIT University	SAMN04589935	GCA_002092845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/845/GCA_002092845.1_ASM209284v1	-	AUS22-Bd2
Leptospira santarosai serovar Shermani str. LT 821	758847	PRJNA47139	47139	Spirochaetes	Spirochaetia	3.98361	41.8163	chromosome I:NZ_CP006694.1/CP006694.1; chromosome II:NZ_CP006695.1/CP006695.1	-	2	3955	3673	10/8/14	4/3/17	Complete Genome	"Kidney research center, Chang Gung Memorial Hospital"	SAMN02470123	GCA_000313175.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/175/GCA_000313175.2_ASM31317v2	"2,304,108,326,038,500"	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.91169	67.1	-	LOTD01	63	7154	6807	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449138	GCA_001522075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/075/GCA_001522075.1_ASM152207v1	-	RF23-BP17
Propionibacterium freudenreichii	1744	PRJEB6440	270204	Terrabacteria group	Actinobacteria	2.65976	67.1	-	CDAE01	48	2375	2256	3/21/15	4/4/17	Scaffold	INRA STLO	SAMEA2826793	GCA_001369015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/369/015/GCA_001369015.1_CIRM-BIA513	-	CIRM-BIA 513
Halobacillus halophilus DSM 2266	866895	PRJEA50647	50647	Terrabacteria group	Firmicutes	4.17001	41.8004	chromosome:NC_017668.1/HE717023.1; plasmid PL16:NC_017669.1/HE717024.1; plasmid PL3:NC_017670.1/HE717025.1	-	3	4112	3975	4/11/12	6/15/17	Complete Genome	Max-Planck-Institute of Biochemistry	SAMEA2272168	GCA_000284515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/515/GCA_000284515.1_ASM28451v1	22583374	type strain: DSM 2266
Pseudomonas stutzeri	316	PRJNA268715	268715	Proteobacteria	Gammaproteobacteria	4.83845	64	-	JUDR01	56	4625	4393	1/26/15	4/3/17	Scaffold	Chinese Academy of Agricultural Scineces	SAMN03224140	GCA_000828205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/205/GCA_000828205.1_ASM82820v1	25814604	YC-YH1
Yersinia intermedia	631	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.83405	47.5	-	CTFU01	33	4490	4230	3/26/15	4/4/17	Scaffold	SC	SAMEA859882	GCA_001218045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/045/GCA_001218045.1_4821_8_5	-	182/02
Paenibacillus polymyxa ATCC 842	1036171	PRJNA67165	67165	Terrabacteria group	Firmicutes	5.90358	44.9	-	AFOX01	13	5369	5171	6/10/11	5/19/17	Scaffold	Korea Research Institute of Bioscience & Biotechnology	SAMN02470189	GCA_000217775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/775/GCA_000217775.1_PPt02	21742878	ATCC 842
Bacillus coagulans H-1	1236905	PRJNA176246	176246	Terrabacteria group	Firmicutes	2.86288	47.3	-	ANAQ01	377	2890	2616	1/25/13	3/31/17	Contig	Shanghai Jiao Tong University	SAMN02470963	GCA_000333935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/935/GCA_000333935.1_H1_v1	23682151	H-1
Vibrio sp. J2-31	1507980	PRJEB5897	284703	Proteobacteria	Gammaproteobacteria	5.70146	44.5	-	CCKJ01	254	5056	4890	5/20/15	4/10/17	Scaffold	STATION BIOLOGIQUE DE ROSCOFF	SAMEA2594005	GCA_001243385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/385/GCA_001243385.1_VRSK31v1_PRJEB5897	-	J2-31
Staphylococcus saprophyticus	29385	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.62363	33	-	LNPI01	41	2569	2424	9/28/16	4/5/17	Contig	Tufts University	SAMN04244262	GCA_001747645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/645/GCA_001747645.1_ASM174764v1	-	735A
Streptococcus sanguinis SK330	888813	PRJNA53167	53167	Terrabacteria group	Firmicutes	2.41567	43	-	AFBD01	11	2402	2284	4/4/11	3/30/17	Scaffold	Baylor College of Medicine	SAMN00253320	GCA_000195025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/025/GCA_000195025.1_ASM19502v1	-	SK330
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.27131	36.7	-	LPRD01	8	2395	2289	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305137	GCA_001559975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/975/GCA_001559975.1_GG12_C01_02	-	GG12-C01-02
Bacillus weihenstephanensis	86662	PRJNA318333	318333	Terrabacteria group	Firmicutes	5.64458	35.2	-	LXLO01	117	5945	5492	10/12/16	4/5/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04819580	GCA_001757915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/915/GCA_001757915.1_ASM175791v1	-	GOE3
Photobacterium angustum	661	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.85745	39.5	-	JZTA01	57	4378	3893	3/10/15	4/3/17	Contig	FDA/CFSAN	SAMN03295469	GCA_000950355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/355/GCA_000950355.1_CFSAN029421_01.0	25931609	GCSL-A2-1
Parabacteroides distasonis	823	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	5.0994	45	-	CYXP01	23	4341	4131	10/1/15	6/12/17	Contig	SC	SAMEA3545280	GCA_001405935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/935/GCA_001405935.1_13414_6_56	-	2789STDY5608872
Bifidobacterium breve DSM 20213 = JCM 1192	518634	PRJNA29259	29259	Terrabacteria group	Actinobacteria	2.33139	58.5	-	ACCG02	103	2073	1927	1/22/09	3/30/17	Scaffold	Washington University Genome Sequencing Center	SAMN00008778	GCA_000158015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/015/GCA_000158015.1_ASM15801v1	-	DSM 20213
Streptococcus merionis	400065	PRJEB6403	251923	Terrabacteria group	Firmicutes	2.38413	41.8	chromosome 1:NZ_LT906439.1/LT906439.1	-	1	2240	2126	8/15/17	8/28/17	Complete Genome	SC	SAMEA4412692	GCA_900187085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/085/GCA_900187085.1_50624_E01	-	NCTC13788
Moraxella catarrhalis CO72	857573	PRJNA49923	49923	Proteobacteria	Gammaproteobacteria	1.94764	41.4	-	AERK01	25	1841	1722	3/22/11	3/30/17	Contig	Center for Genomic Sciences	SAMN02393792	GCA_000193045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/045/GCA_000193045.2_ASM19304v2	21269504	CO72
Agrobacterium vitis	373	PRJNA328321	328321	Proteobacteria	Alphaproteobacteria	6.40872	57.6	-	MBFE01	103	5885	5623	11/1/16	4/5/17	Contig	Monash University Malaysia	SAMN05369610	GCA_001860215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/215/GCA_001860215.1_ASM186021v1	-	T1/7
Bacteroides vulgatus	821	PRJEB16837	350972	FCB group	Bacteroidetes/Chlorobi group	4.9748	42.4	-	FOBA01	106	4318	3996	10/29/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487923	GCA_900109635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/635/GCA_900109635.1_IMG-taxon_2623620522_annotated_assembly	-	NLAE-zl-G202
Gluconobacter oxydans	442	PRJNA288385	288385	Proteobacteria	Alphaproteobacteria	2.99612	61	-	LHZW01	56	2795	2692	3/7/16	4/5/17	Contig	Ghent University	SAMN03799296	GCA_001581045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/045/GCA_001581045.1_ASM158104v1	-	LMG 27012
Bacillus clausii	79880	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.3749	44.5	-	NPCH01	191	4335	4170	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372709	GCA_002272445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/445/GCA_002272445.1_assembly-7547-G_v1	-	7547-G
Citrobacter koseri	545	PRJEB6512	252576	Proteobacteria	Gammaproteobacteria	4.97554	53.6	-	-	5	5002	4794	-	-	Scaffold	URMITE	SAMEA2612307	GCA_000939835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/835/GCA_000939835.1_PRJEB6512_assembly_1	-	-
Lactobacillus salivarius NIAS840	1029822	PRJNA66655	66655	Terrabacteria group	Firmicutes	2.04656	33	-	AFMN01	4	2000	1833	5/31/11	3/30/17	Contig	"NIAS, Korea"	SAMN02470897	GCA_000215465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/465/GCA_000215465.2_ASM21546v2	21914873	NIAS840
Streptomyces scabiei	1930	PRJDB4008	287593	Terrabacteria group	Actinobacteria	10.0013	71.5	-	BCMM01	147	8793	8284	12/23/15	3/12/17	Scaffold	"Plant Pathology and Entomology, Kagoshima Institute for Agricultural Development"	SAMD00034890	GCA_001485125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/125/GCA_001485125.1_ASM148512v1	26941144	S58
Clostridium beijerinckii	1520	PRJNA322809	322809	Terrabacteria group	Firmicutes	5.87482	29.6	-	LZZH01	358	5153	4950	2/23/17	2/25/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05170530	GCA_002006295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/295/GCA_002006295.1_ASM200629v1	-	NRRL B-591
Erwinia amylovora UPN527	1255308	PRJEB605	196604	Proteobacteria	Gammaproteobacteria	3.76697	53.6	-	CAPC01	18	3532	3374	4/8/13	4/1/17	Contig	CeBiTec	SAMEA2272628	GCA_000367645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/645/GCA_000367645.1_ASM36764v1	-	UPN527
Klebsiella oxytoca MGH 28	1328429	PRJNA201943	201943	Proteobacteria	Gammaproteobacteria	5.81748	55.1	-	AYJD01	2	5480	5273	10/30/13	2/21/17	Scaffold	Broad Institute	SAMN02138568	GCA_000492955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/955/GCA_000492955.1_Kleb_oxyt_MGH_28_V1	-	MGH 28
Cronobacter sakazakii	28141	PRJNA251801	251801	Proteobacteria	Gammaproteobacteria	4.54341	56.9	-	JOLI01	103	4442	4202	10/9/15	4/4/17	Scaffold	"Nottingham Trent University, UK"	SAMN02840768	GCA_001309055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/055/GCA_001309055.1_ASM130905v1	26438044	705
Anoxybacillus flavithermus	33934	PRJNA383058	383058	Terrabacteria group	Firmicutes	2.81212	41.8	chromosome:NZ_CP020815.1/CP020815.1	-	1	2932	2667	8/8/17	8/10/17	Complete Genome	Kyungpook National University	SAMN06758772	GCA_002243705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/705/GCA_002243705.1_ASM224370v1	-	DSM 2641T
Proteus mirabilis WGLW6	1125694	PRJNA169468	169468	Proteobacteria	Gammaproteobacteria	4.10189	39.2	-	AMGT01	8	3816	3649	9/17/12	3/30/17	Scaffold	Broad Institute	SAMN02463961	GCA_000297815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/815/GCA_000297815.1_Prot_mira_WGLW6_V1	-	WGLW6
Mycoplasma bovis	28903	PRJNA306895	306895	Terrabacteria group	Tenericutes	0.947379	29.3	-	LQFC01	76	817	732	1/4/17	4/6/17	Contig	"University of California, Davis"	SAMN04366550	GCA_001929835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/835/GCA_001929835.1_ASM192983v1	-	2930MB
Brucella ovis IntaBari-2009-88-4	1293913	PRJNA189525	189525	Proteobacteria	Alphaproteobacteria	3.29131	57.2	-	AQIF01	21	3409	3032	4/16/13	4/1/17	Contig	Broad Institute	SAMN01921146	GCA_000366045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/045/GCA_000366045.1_Bruc_ovis_IntaBari-2009-88-4_V1	-	IntaBari-2009-88-4
Moorella thermoacetica	1525	PRJNA330924	330924	Terrabacteria group	Firmicutes	2.55491	57	-	MDDC01	55	2556	2397	11/10/16	4/11/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05430241	GCA_001875325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/325/GCA_001875325.1_ASM187532v1	-	DSM 21394
Photorhabdus luminescens	29488	PRJNA317234	317234	Proteobacteria	Gammaproteobacteria	5.51814	42.3	-	LWGQ01	177	4768	4217	4/18/16	4/18/16	Contig	Universidad Nacional de Villa Maria (CIT-CONICET)	SAMN04603045	GCA_001620335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/335/GCA_001620335.1_ASM162033v1	-	DSPV002N
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.52854	32.6	-	CUEY01	98	2521	2378	3/31/15	3/26/17	Contig	SC	SAMEA1035051	GCA_001223905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/905/GCA_001223905.1_7067_4_88	-	CN1175
Bacillus safensis	561879	PRJNA353942	353942	Terrabacteria group	Firmicutes	3.74084	41.8	chromosome:NZ_CP018100.1/CP018100.1	-	1	3882	3707	4/3/17	4/5/17	Complete Genome	Universidade Federal do Parana	SAMN06030516	GCA_002077215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/215/GCA_002077215.1_ASM207721v1	-	BRM1
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.73093	67.3	-	LOWH01	129	6092	5798	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449228	GCA_001523755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/755/GCA_001523755.1_ASM152375v1	-	FL-2-2-10-S1-D0
Chromobacterium violaceum	536	PRJNA369804	369804	Proteobacteria	Betaproteobacteria	4.72307	64.8	-	MUKX01	63	4370	4219	4/6/17	4/8/17	Contig	Centers for Disease Control and Prevention	SAMN06294336	GCA_002081895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/895/GCA_002081895.1_ASM208189v1	-	H5525
Gardnerella vaginalis	2702	PRJNA360037	360037	Terrabacteria group	Actinobacteria	1.74672	41.8	chromosome:NZ_CP019058.1/CP019058.1	-	1	1468	1374	1/17/17	4/6/17	Complete Genome	"Institute of Biotechnology, Vilnius University"	SAMN06199463	GCA_001953155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/155/GCA_001953155.1_ASM195315v1	-	GV37
Thermococcus barophilus	55802	PRJNA274261	274261	Euryarchaeota	Thermococci	2.38853	41.8	chromosome:NZ_CP013050.1/CP013050.1	-	1	2643	2520	11/5/15	4/11/17	Complete Genome	Ecole Normale Superieure de Lyon	SAMN03324231	GCA_001433455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/455/GCA_001433455.1_ASM143345v1	26769929	CH5
Methanosarcina lacustris Z-7289	1434111	PRJNA230943	230943	Euryarchaeota	Methanomicrobia	4.13981	41.8	chromosome:NZ_CP009515.1/CP009515.1	-	1	3520	3264	4/7/15	4/17/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN03074579	GCA_000970265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/265/GCA_000970265.1_ASM97026v1	-	Z-7289
Lactobacillus brevis ATCC 14869 = DSM 20054	649758	PRJNA38325	38325	Terrabacteria group	Firmicutes	2.47305	45.9	-	AWVK01	86	2518	2309	9/18/13	4/2/17	Scaffold	WUGSC	SAMN02436750	GCA_000469365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/365/GCA_000469365.1_ASM46936v1	-	ATCC 14869
Methanosarcina sp. WH1	1434102	PRJNA230957	230957	Euryarchaeota	Methanomicrobia	3.91409	41.8	chromosome:NZ_CP009504.1/CP009504.1	-	1	3511	3206	4/7/15	4/10/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN03074593	GCA_000970005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/005/GCA_000970005.1_ASM97000v1	-	WH1
Bartonella australis Aust/NH1	1094489	PRJNA73943	73943	Proteobacteria	Alphaproteobacteria	1.59649	41.8	chromosome:NC_020300.1/CP003123.1	-	1	1424	1344	2/20/13	4/17/17	Complete Genome	Uppsala University	SAMN02604270	GCA_000341355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/355/GCA_000341355.1_ASM34135v1	23555299	Aust/NH1
Desulfosporosinus meridiei DSM 13257	768704	PRJNA62669	62669	Terrabacteria group	Firmicutes	4.87357	41.8	chromosome:NC_018515.1/CP003629.1	-	1	4554	4326	8/27/12	5/18/17	Complete Genome	JGI	SAMN02261405	GCA_000231385.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/385/GCA_000231385.3_ASM23138v3	23105050	DSM 13257
Bartonella henselae	38323	PRJNA295147	295147	Proteobacteria	Alphaproteobacteria	1.84074	38	-	LNZX01	66	1657	1458	1/4/17	4/10/17	Contig	Anses UMR BIPAR	SAMN04286619	GCA_001932075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/075/GCA_001932075.1_ASM193207v1	-	A20
Lactobacillus acidophilus CIRM-BIA 442	1226677	PRJEB1530	200911	Terrabacteria group	Firmicutes	1.98699	34.7	-	CBLP01	19	1974	1864	7/7/13	4/1/17	Contig	INRA STLO	SAMEA2272381	GCA_000442865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/865/GCA_000442865.1_LaCIRM442V1	-	CIRM-BIA 442
Bartonella quintana JK 67	1134502	PRJNA81677	81677	Proteobacteria	Alphaproteobacteria	1.59783	38.9	-	AHPC01	4	1408	1204	6/12/14	4/10/17	Scaffold	Broad Institute	SAMN00778961	GCA_000708965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/965/GCA_000708965.1_Bart_quin_JK_67_V1	-	JK 67
Streptococcus uberis C8329	1450185	PRJNA234018	234018	Terrabacteria group	Firmicutes	1.92395	36.6	-	JATG01	20	1952	1868	4/22/15	4/3/17	Contig	University of Nottingham	SAMN02570393	GCA_000975495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/975/495/GCA_000975495.1_ASM97549v1	25898893	C8329
Bacteroides thetaiotaomicron	818	PRJNA267549	267549	FCB group	Bacteroidetes/Chlorobi group	6.35926	43	-	JVQR01	351	5035	4755	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197381	GCA_001055755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/755/GCA_001055755.1_ASM105575v1	26230489	19_BTHE
Salmonella bongori	54736	PRJNA369050	369050	Proteobacteria	Gammaproteobacteria	4.57215	51.3	-	NAPQ01	84	4529	4212	5/8/17	5/10/17	Contig	"Istituto Zooprofilattico Sperimentale del Piemonte, Liguria e Valle d'Aosta"	SAMN06276356	GCA_002119365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/365/GCA_002119365.1_ASM211936v1	-	CATO-2016
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.16657	39.9	-	FPLU01	7	1062	963	5/10/17	5/24/17	Contig	WTSI	SAMEA1094366	GCA_900118635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/635/GCA_900118635.1_7067_6_52	-	99DC1
Anaplasma phagocytophilum str. ApMUC09	1359152	PRJNA212451	212451	Proteobacteria	Alphaproteobacteria	1.5204	41.7	-	LANV01	1	1247	1030	3/27/15	4/3/17	Contig	IGS	SAMN02585078	GCA_000964745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/745/GCA_000964745.1_ASM96474v1	-	ApMUC09
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.01438	41.7	-	JJPR01	167	3434	3236	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708951	GCA_000979025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/025/GCA_000979025.1_gtlEnvA5udCFS	25756680	3.H.A.2.6
Chlamydia muridarum	83560	PRJNA244650	244650	PVC group	Chlamydiae	1.08045	40.3	-	JNOO01	2	960	908	6/10/14	4/2/17	Contig	IGS	SAMN02808328	GCA_000700885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/885/GCA_000700885.1_cmvar003	24961692	Var003
Anoxybacillus flavithermus WK1	491915	PRJNA28245	28245	Terrabacteria group	Firmicutes	2.84675	41.8	chromosome:NC_011567.1/CP000922.1	-	1	3016	2806	11/13/08	3/30/17	Complete Genome	University of Hawaii at Manoa	SAMN02604185	GCA_000019045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/045/GCA_000019045.1_ASM1904v1	19014707	WK1
Lactobacillus gasseri ATCC 33323 = JCM 1131	324831	PRJDB635	243213	Terrabacteria group	Firmicutes	1.82325	35	-	BALQ01	20	1772	1576	4/1/14	4/10/17	Contig	The University of Tokyo	SAMD00003499	GCA_000615125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/125/GCA_000615125.1_ASM61512v1	-	JCM 1131
Streptococcus equi subsp. zooepidemicus MGCS10565	552526	PRJNA30781	30781	Terrabacteria group	Firmicutes	2.02417	41.8	chromosome:NC_011134.1/CP001129.1	-	1	1909	1735	8/11/08	4/6/17	Complete Genome	The Methodist Hospital Research Institute	SAMN02603943	GCA_000020765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/765/GCA_000020765.1_ASM2076v1	18716664	MGCS10565; ATCC BAA1716
Halobacillus halophilus	1570	PRJNA390798	390798	Terrabacteria group	Firmicutes	4.17352	41.7971	chromosome:NZ_CP022106.1/CP022106.1; plasmid pHL2HP61:NZ_CP022108.1/CP022108.1; plasmid pHL2HP62:NZ_CP022107.1/CP022107.1	-	3	4125	3981	6/27/17	6/29/17	Complete Genome	Forman Christian College	SAMN07250963	GCA_002209425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/425/GCA_002209425.1_ASM220942v1	-	HL2HP6
Ruminococcus albus	1264	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.48194	45.4	-	DGTY01	210	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453630	GCA_002394455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/455/GCA_002394455.1_ASM239445v1	28894102	-
Streptococcus gordonii	1302	PRJNA280650	280650	Terrabacteria group	Firmicutes	2.19098	40.5	-	LAVY01	43	2131	2024	3/11/16	4/5/17	Contig	University of Malaya	SAMN03480623	GCA_001588735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/735/GCA_001588735.1_ASM158873v1	-	PV40
Providencia stuartii	588	PRJNA340005	340005	Proteobacteria	Gammaproteobacteria	4.60749	41.7819	chromosome:NZ_CP017054.1/CP017054.1; plasmid pPS1:NZ_CP017055.1/CP017055.1; plasmid pPS2:NZ_CP017056.1/CP017056.1	-	3	4398	4136	12/2/16	4/6/17	Complete Genome	University of Michigan Medical School	SAMN05629093	GCA_001888205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/205/GCA_001888205.1_ASM188820v1	27895127	BE2467
Photobacterium profundum SS9	298386	PRJNA13128	13128	Proteobacteria	Gammaproteobacteria	6.40328	41.7454	chromosome 1:NC_006370.1/CR354531.1; chromosome 2:NC_006371.1/CR354532.1; plasmid pPBPR1:NC_005871.1/CR377818.1	-	3	5864	5354	4/30/04	5/19/17	Complete Genome	"University of Padova, Italy"	SAMEA3138336	GCA_000196255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/255/GCA_000196255.1_ASM19625v1	-	SS9
Mesorhizobium loti	381	PRJNA325571	325571	Proteobacteria	Alphaproteobacteria	6.52569	62.9	-	LZTI01	31	6394	6127	6/20/16	4/5/17	Contig	Curtin University	SAMN05240959	GCA_001671525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/671/525/GCA_001671525.1_ASM167152v1	-	R7ANS::ICEMlSym2014
Thermococcus barophilus MP	391623	PRJNA19379	19379	Euryarchaeota	Thermococci	2.06424	41.7082	chromosome:NC_014804.1/CP002372.1; plasmid pTBMP1:NC_015471.1/CP002373.1	-	2	2256	2182	12/17/10	4/7/17	Complete Genome	Moore Foundation	SAMN02603625	GCA_000151105.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/151/105/GCA_000151105.2_ASM15110v2	21217005	MP
Bordetella bronchiseptica CA90 BB02	1331216	PRJNA202128	202128	Proteobacteria	Betaproteobacteria	5.12593	68.2	-	JHBU01	169	4913	4685	4/29/14	4/2/17	Contig	JCVI	SAMN02231449	GCA_000649165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/165/GCA_000649165.1_gbb20v01	25908122	CA90 BB02
Treponema denticola ASLM	999427	PRJNA64905	64905	Spirochaetes	Spirochaetia	2.76824	38.1	-	AGDR01	2	2658	2501	2/7/13	4/1/17	Scaffold	Broad Institute	SAMN02596717	GCA_000338635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/338/635/GCA_000338635.1_Trep_dent_ASLM_V1	-	ASLM
Bacteroides uniformis	820	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	4.73529	46.5	-	CYYO01	32	4044	3880	10/1/15	4/4/17	Contig	SC	SAMEA3545272	GCA_001406095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/095/GCA_001406095.1_13414_6_48	-	2789STDY5608864
Bacteroides ovatus	28116	PRJNA377666	377666	FCB group	Bacteroidetes/Chlorobi group	6.68416	42.1	-	NFKW01	90	5223	5001	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473630	GCA_002160595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/595/GCA_002160595.1_ASM216059v1	-	An161
Bacillus pumilus	1408	PRJEB6403	251923	Terrabacteria group	Firmicutes	3.85567	41.7	chromosome 1:NZ_LT906438.1/LT906438.1	-	1	4019	3821	8/15/17	8/28/17	Complete Genome	SC	SAMEA4076707	GCA_900186955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/955/GCA_900186955.1_49386_E02	-	NCTC10337
Clostridium sporogenes	1509	PRJNA294753	294753	Terrabacteria group	Firmicutes	4.33865	27.8	-	LJFK01	111	4163	3938	9/10/15	4/4/17	Contig	Universita' Cattolica del Sacro Cuore	SAMN04032741	GCA_001280965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/965/GCA_001280965.1_ASM128096v1	27081128	UC9000
Bacillus megaterium	1404	PRJNA285407	285407	Terrabacteria group	Firmicutes	5.86421	37.6	-	LDPJ01	240	6004	5696	6/19/15	4/3/17	Contig	Rochester Institute of Technology	SAMN03753583	GCA_001029885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/885/GCA_001029885.1_RIT381_V1	26227604	RIT381
Enterococcus casseliflavus	37734	PRJNA342049	342049	Terrabacteria group	Firmicutes	3.63921	42.2	-	MJEG01	50	3512	3352	4/3/17	4/5/17	Contig	Lethbridge Research Centre	SAMN05735030	GCA_002077615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/615/GCA_002077615.1_ASM207761v1	28270110	F1129F 46
Lactobacillus curvatus	28038	PRJNA394869	394869	Terrabacteria group	Firmicutes	2.11431	41.7	chromosome:NZ_CP022474.1/CP022474.1	-	1	2062	1934	7/24/17	7/28/17	Complete Genome	ETH Zurich	SAMN07361834	GCA_002224425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/425/GCA_002224425.1_ASM222442v1	-	MRS6
Vibrio splendidus	29497	PRJNA302718	302718	Proteobacteria	Gammaproteobacteria	5.38187	44.4	-	LNRO01	87	4868	4655	2/10/16	4/4/17	Contig	University of Cambridge	SAMN04279309	GCA_001558055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/055/GCA_001558055.1_ASM155805v1	-	MARa
Anaplasma phagocytophilum str. Norway variant2	1392507	PRJNA217033	217033	Proteobacteria	Alphaproteobacteria	1.5452	41.7	chromosome:NZ_CP015376.1/CP015376.1	-	1	1195	1075	5/3/16	4/5/17	Complete Genome	University of Florida	SAMN02647161	GCA_000689635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/635/GCA_000689635.2_ASM68963v2	"2,543,720,725,437,600"	Norway variant2
Anoxybacillus gonensis	198467	PRJNA290998	290998	Terrabacteria group	Firmicutes	2.80367	41.7	chromosome:NZ_CP012152.1/CP012152.1	-	1	2970	2808	7/27/15	4/10/17	Complete Genome	University of Malaya	SAMN03121471	GCA_001187595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/595/GCA_001187595.1_ASM118759v1	-	G2
Methanosarcina sp. WWM596	1434103	PRJNA230958	230958	Euryarchaeota	Methanomicrobia	4.13734	41.7	chromosome:NZ_CP009503.1/CP009503.1	-	1	3707	3377	4/7/15	4/10/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN03074594	GCA_000969965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/965/GCA_000969965.1_ASM96996v1	-	WWM596
Haemophilus parasuis 84-15995	1275969	PRJNA184682	184682	Proteobacteria	Gammaproteobacteria	2.09083	39.8	-	APBX01	73	2153	1899	8/7/13	4/1/17	Contig	Iowa State University	SAMN02470071	GCA_000444625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/625/GCA_000444625.1_ASM44462v1	24051319	84-15995
Helicobacter pullorum	35818	PRJNA326721	326721	Proteobacteria	delta/epsilon subdivisions	1.78326	34.3	-	MAPA01	134	1782	1677	8/4/16	4/5/17	Contig	University of Hyderabad	SAMN05291445	GCA_001698765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/765/GCA_001698765.1_ASM169876v1	-	NAP8W25
Streptococcus equi subsp. zooepidemicus Sz5	1381084	PRJNA214018	214018	Terrabacteria group	Firmicutes	2.05437	41.7	-	JAUC01	84	1967	1830	2/17/15	3/25/17	Contig	Copenhagen University	SAMN02298717	GCA_000876355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/355/GCA_000876355.1_ASM87635v1	-	Sz5
Micrococcus luteus	1270	PRJNA313377	313377	Terrabacteria group	Actinobacteria	2.51322	73	-	LWGN01	124	2408	2160	9/30/16	4/5/17	Contig	King Abdullah University of Science and Technology (KAUST)	SAMN04520143	GCA_001750235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/235/GCA_001750235.1_ASM175023v1	-	K39
Alteromonas macleodii	28108	PRJNA338983	338983	Proteobacteria	Gammaproteobacteria	5.24844	44.6	-	MIPZ01	67	4710	4559	9/30/16	4/5/17	Contig	US Naval Research Lab	SAMN05578455	GCA_001750315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/315/GCA_001750315.1_ASM175031v1	-	KCPu01
Bifidobacterium bifidum	1681	PRJNA239838	239838	Terrabacteria group	Actinobacteria	2.20847	62.7	-	JGYO01	2	1887	1712	8/18/14	4/2/17	Contig	University of Parma	SAMN02673426	GCA_000741085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/085/GCA_000741085.1_Bifbif	"2,508,549,325,107,960"	LMG 11041
Yersinia kristensenii	28152	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.7713	47.5	-	CPXZ01	56	4386	4169	3/23/15	4/3/17	Scaffold	SC	SAMEA859905	GCA_001153365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/365/GCA_001153365.1_5139_5_10	-	119/84
Yersinia frederiksenii	29484	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.75061	47	-	CPYY01	50	4330	4112	3/23/15	4/3/17	Scaffold	SC	SAMEA859868	GCA_001142745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/745/GCA_001142745.1_4821_6_5	-	3317/84
Bacillus mycoides	1405	PRJNA356719	356719	Terrabacteria group	Firmicutes	5.16724	35.5	-	MRZX01	101	5431	5045	2/16/17	4/6/17	Contig	University of Groningen	SAMN06121431	GCA_002001145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/145/GCA_002001145.1_SB4	-	SB4
Comamonas testosteroni	285	PRJNA217889	217889	Proteobacteria	Betaproteobacteria	5.36911	61.1	-	AWOT01	91	4889	4704	10/1/14	4/2/17	Contig	Huazhong Agricultural University	SAMN02768806	GCA_000761265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/265/GCA_000761265.1_CJC9v1	-	JC9
Stenotrophomonas maltophilia	40324	PRJNA244350	244350	Proteobacteria	Gammaproteobacteria	4.98931	66.1	chromosome:NZ_CP008838.1/CP008838.1	-	1	4666	4501	8/22/14	3/24/17	Chromosome	Los Alamos National Laboratory	SAMN02874005	GCA_000742995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/995/GCA_000742995.1_ASM74299v1	25258273	13637
Streptococcus equi subsp. zooepidemicus CY	1403449	PRJNA221123	221123	Terrabacteria group	Firmicutes	2.10738	41.7	chromosome:NZ_CP006770.1/CP006770.1	-	1	1993	1827	5/30/14	3/24/17	Complete Genome	Bioinformatics Center	SAMN02997653	GCA_000696505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/505/GCA_000696505.1_ASM69650v1	-	CY
Neorickettsia helminthoeca str. Oregon	1286528	PRJNA187358	187358	Proteobacteria	Alphaproteobacteria	0.884232	41.7	chromosome:NZ_CP007481.1/CP007481.1	-	1	841	788	4/17/14	4/17/17	Complete Genome	IGS	SAMN02367297	GCA_000632985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/985/GCA_000632985.1_ASM63298v1	-	Oregon
Streptococcus parasanguinis ATCC 15912	760570	PRJNA48315	48315	Terrabacteria group	Firmicutes	2.15365	41.7	chromosome:NC_015678.1/CP002843.1	-	1	2084	1953	6/10/11	3/30/17	Complete Genome	Baylor College of Medicine	SAMN00113608	GCA_000164675.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/675/GCA_000164675.2_ASM16467v2	-	ATCC 15912
Moraxella catarrhalis BBH18	1236608	PRJNA46869	46869	Proteobacteria	Gammaproteobacteria	1.86329	41.7	chromosome:NC_014147.1/CP002005.1	-	1	1733	1622	5/11/10	3/30/17	Complete Genome	Radboud University Nijmegen Medical Centre	SAMN02603777	GCA_000092265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/265/GCA_000092265.1_ASM9226v1	20453089	BBH18
Pseudoalteromonas luteoviolacea	43657	PRJNA312897	312897	Proteobacteria	Gammaproteobacteria	6.22398	41.6877	chromosome 1:NZ_CP015411.1/CP015411.1; chromosome 2:NZ_CP015412.1/CP015412.1	-	2	5213	4938	9/30/16	4/5/17	Complete Genome	MaCuMBA Project	SAMN04508262	GCA_001750165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/165/GCA_001750165.1_ASM175016v1	27695447	S4054249
Streptococcus mutans TCI-116	1074116	PRJNA71983	71983	Terrabacteria group	Firmicutes	1.92969	36.7	-	AGKJ01	60	1935	1837	10/6/11	3/22/17	Contig	JCVI	SAMN02436347	GCA_000228825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/825/GCA_000228825.2_SMUT4-NEX_5-116	-	TCI-116
Borrelia garinii IPT131	1408852	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.21176	28	-	AYBB01	348	1155	655	12/3/13	4/2/17	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378819	GCA_000501195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/195/GCA_000501195.1_BorGarIPT131	-	IPT131
Streptococcus dysgalactiae subsp. equisimilis	119602	PRJNA279308	279308	Terrabacteria group	Firmicutes	2.07269	39.2	-	LAKU01	75	2051	1808	4/8/15	4/3/17	Contig	MD Anderson	SAMN03445736	GCA_000970995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/995/GCA_000970995.1_ASM97099v1	26430051	UT-5354
Methanobrevibacter smithii TS147C	911125	PRJNA59667	59667	Euryarchaeota	Methanobacteria	1.97303	30.4	-	AELT01	40	1917	1678	2/17/11	3/30/17	Contig	Washington University in St.Louis	SAMN02436673	GCA_000189975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/975/GCA_000189975.2_ASM18997v2	21317366	TS147C
Microcystis aeruginosa PCC 9701	721123	PRJEA88297	88297	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.756	42.7	-	CAIQ01	323	4715	4312	5/28/12	5/19/17	Scaffold	Genoscope CEA	SAMEA2271961	GCA_000312285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/285/GCA_000312285.1_ASM31228v1	-	PCC 9701
Bradyrhizobium japonicum 22	1304877	PRJNA195878	195878	Proteobacteria	Alphaproteobacteria	7.50456	64.5	-	AXVG01	4	7121	6860	10/25/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02441445	GCA_000482425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/425/GCA_000482425.1_ASM48242v1	-	22
Pseudoalteromonas luteoviolacea	43657	PRJNA312897	312897	Proteobacteria	Gammaproteobacteria	6.22125	41.6877	chromosome 1:NZ_CP015415.1/CP015415.1; chromosome 2:NZ_CP015416.1/CP015416.1	-	2	5209	4937	9/30/16	4/5/17	Complete Genome	MaCuMBA Project	SAMN04508260	GCA_001750185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/185/GCA_001750185.1_ASM175018v1	27695447	S4054
Pseudoalteromonas luteoviolacea	43657	PRJNA312897	312897	Proteobacteria	Gammaproteobacteria	6.22135	41.6876	chromosome 1:NZ_CP015413.1/CP015413.1; chromosome 2:NZ_CP015414.1/CP015414.1	-	2	5205	4934	9/30/16	4/5/17	Complete Genome	MaCuMBA Project	SAMN04508261	GCA_001750405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/405/GCA_001750405.1_ASM175040v1	27695447	S40542
Brucella canis 118	1229903	PRJNA174373	174373	Proteobacteria	Alphaproteobacteria	3.23483	57.3	-	AMOZ01	154	3256	3076	9/19/12	3/30/17	Contig	Beijing Institute of Disease Control and Prevention	SAMN02469334	GCA_000298575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/575/GCA_000298575.1_V1.0_for_Brucella_canis_str_118	23144418	118
Clavibacter michiganensis subsp. michiganensis	33013	PRJNA331198	331198	Terrabacteria group	Actinobacteria	3.36592	72.6	-	MDHG01	2	3152	2762	5/19/17	8/4/17	Contig	University of California	SAMN05439583	GCA_002150945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/945/GCA_002150945.1_ASM215094v1	-	CASJ006
Rickettsia prowazekii str. Cairo 3	1290430	PRJNA188532	188532	Proteobacteria	Alphaproteobacteria	1.11397	29.1	-	APMO01	20	925	866	4/29/13	4/1/17	Contig	Naval Medical Research Center	SAMN01983878	GCA_000385495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/495/GCA_000385495.1_P_2008_03_27_11_29_25_runAssembly	23814035	Cairo 3
Rhizobium leguminosarum bv. trifolii WSM2012	754522	PRJNA65301	65301	Proteobacteria	Alphaproteobacteria	7.18056	60.9	-	AJUJ01	6	7101	6621	6/5/12	7/9/17	Scaffold	JGI	SAMN02261419	GCA_000271825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/825/GCA_000271825.1_ASM27182v1	-	WSM2012
Treponema pallidum subsp. pallidum	161	PRJNA315615	315615	Spirochaetes	Spirochaetia	1.13922	52.7	chromosome:NZ_CP015162.1/CP015162.1	-	1	1063	995	4/22/16	4/5/17	Chromosome	xiamen university	SAMN04556745	GCA_001628695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/695/GCA_001628695.1_ASM162869v1	-	Amoy
Borrelia burgdorferi 94a	476212	PRJNA20999	20999	Spirochaetes	Spirochaetia	1.29545	28.2906	plasmid 94a_cp26:NC_012263.1/CP001493.1; plasmid 94a_cp32-10:NC_012255.1/CP001498.1; plasmid 94a_cp32-11:NC_012254.1/CP001491.1; plasmid 94a_cp32-5:NC_012250.1/CP001496.1; plasmid 94a_cp32-6:NC_012259.1/CP001499.1; plasmid 94a_cp32-7:NC_012258.1/CP001492.1; plasmid 94a_cp9:NC_012269.1/CP001501.1; plasmid 94a_lp17:NC_012237.1/CP001497.1; plasmid 94a_lp28-3:NC_012231.1/CP001502.1; plasmid 94a_lp28-4:NC_012235.1/CP001490.1; plasmid 94a_lp36:NC_012246.1/CP001494.1; plasmid 94a_lp54:NC_012244.1/CP001500.1; plasmid 94a_lp56:NC_012249.1/CP001495.1	ABGK02	25	1321	1226	10/10/07	3/30/17	Scaffold	J. Craig Venter Institute	SAMN02436324	GCA_000181715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/181/715/GCA_000181715.2_ASM18171v2	-	94a
Burkholderia multivorans CF2	985078	PRJNA62779	62779	Proteobacteria	Betaproteobacteria	6.49962	66.9	-	ALIX01	493	6409	5831	8/10/12	7/9/17	Contig	J. Craig Venter Institute	SAMN00255227	GCA_000286575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/575/GCA_000286575.1_gbmulcf2v1.0	23105085	CF2
Simkania negevensis Z	331113	PRJEA49035	49035	PVC group	Chlamydiae	2.62838	41.6242	chromosome gsn.131:NC_015713.1/FR872582.1; plasmid pSn:NC_015710.1/FR872581.1	-	2	2451	2355	6/21/11	3/22/17	Complete Genome	"University of Vienna, Dept. of Microbial Ecology"	SAMEA2272380	GCA_000237205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/205/GCA_000237205.1_ASM23720v1	21690563	Z
Lactobacillus agilis	1601	PRJNA336089	336089	Terrabacteria group	Firmicutes	2.18721	41.6	chromosome:NZ_CP016766.1/CP016766.1	-	1	2207	2042	8/3/17	8/6/17	Complete Genome	Monash University	SAMN05504077	GCA_002240375.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/375/GCA_002240375.1_ASM224037v1	-	La3
Aliivibrio fischeri	668	PRJNA311605	311605	Proteobacteria	Gammaproteobacteria	4.54258	38	-	LTZC01	72	4234	4086	5/9/16	4/5/17	Contig	MIT	SAMN04519658	GCA_001640465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/465/GCA_001640465.1_ASM164046v1	27128997	MB13B3
Mycoplasma mycoides subsp. capri PG3	1188246	PRJNA178078	178078	Terrabacteria group	Tenericutes	1.0251	23.6	-	ANIV01	9	880	782	2/11/13	3/30/17	Scaffold	Inner Mongolia agricultural university 	SAMN02469926	GCA_000339035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/035/GCA_000339035.1_ASM33903v1	-	PG3
Ureaplasma urealyticum 2608	1161915	PRJNA89457	89457	Terrabacteria group	Tenericutes	0.855948	25.6	-	AJFY01	13	686	613	3/20/12	3/30/17	Contig	The J. Craig Venter Institute	SAMN02436386	GCA_000255395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/395/GCA_000255395.2_Uurealyticum2608v1.0	-	2608
Porphyromonas gingivalis F0566	1321822	PRJNA198892	198892	FCB group	Bacteroidetes/Chlorobi group	2.30609	48.4	-	AWVD01	192	2045	1855	9/16/13	4/1/17	Scaffold	Washington University	SAMN02436881	GCA_000467975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/975/GCA_000467975.1_ASM46797v1	-	F0566
Halobacillus mangrovi	402384	PRJNA380285	380285	Terrabacteria group	Firmicutes	4.1427	41.6	chromosome:NZ_CP020772.1/CP020772.1	-	1	4107	3962	4/18/17	4/21/17	Complete Genome	Kyungpook National University	SAMN06640208	GCA_002097535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/535/GCA_002097535.1_ASM209753v1	-	KTB 131
Lactobacillus fermentum ATCC 14931	525325	PRJNA31485	31485	Terrabacteria group	Firmicutes	1.86701	52.6	-	ACGI01	74	1794	1658	2/12/09	3/30/17	Scaffold	Baylor College of Medicine	SAMN00001473	GCA_000159215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/215/GCA_000159215.1_ASM15921v1	-	ATCC 14931
Orientia tsutsugamushi str. UT76	682184	PRJNA212456	212456	Proteobacteria	Alphaproteobacteria	3.0334	30.3	-	LANZ01	332	4211	4151	3/27/15	3/27/15	Contig	IGS	SAMN02697306	GCA_000964835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/835/GCA_000964835.1_ASM96483v1	-	UT76
Sulfolobus islandicus M.16.23	1132501	PRJNA80897	80897	TACK group	Crenarchaeota	2.60113	35.1	chromosome:NZ_AHJO01000001.1/AHJO01000001.1	AHJO01	1	2851	2573	1/25/12	3/30/17	Chromosome	University of Illinois	SAMN02471819	GCA_000245175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/175/GCA_000245175.2_ASM24517v2	22363207	M.16.23
Lactococcus garvieae I113	1229517	PRJNA174282	174282	Terrabacteria group	Firmicutes	2.17873	37.9	-	AMFD01	49	2184	2068	10/17/12	3/30/17	Contig	"Department of Food, Environmental and Nutritional Sciences, University of Milano"	SAMN02471889	GCA_000305975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/975/GCA_000305975.1_LgarvI113_1.0	23405320	I113
Bifidobacterium adolescentis	1680	PRJNA327473	327473	Terrabacteria group	Actinobacteria	2.42497	59.8	-	MAXD01	45	2072	1931	10/11/16	4/5/17	Contig	Vavilov Institute of General Genetics	SAMN05300513	GCA_001756865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/865/GCA_001756865.1_ASM175686v1	-	Km 4
Vibrio harveyi	669	PRJNA272350	272350	Proteobacteria	Gammaproteobacteria	5.86454	45.1	-	JXIL01	112	5340	5167	2/9/15	4/3/17	Contig	University of Malaya	SAMN03280971	GCA_000834075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/075/GCA_000834075.1_ASM83407v1	-	BSW5
Faecalibacterium prausnitzii	853	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.31127	57.6	-	DCCL01	292	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452231	GCA_002313795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/795/GCA_002313795.1_ASM231379v1	28894102	-
Rickettsia rickettsii str. Hauke	1105103	PRJNA75021	75021	Proteobacteria	Alphaproteobacteria	1.26977	32.5	chromosome:NC_016911.1/CP003318.1	-	1	1537	1258	2/17/12	3/30/17	Chromosome	Los Alamos National Laboratory	SAMN02603551	GCA_000283835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/835/GCA_000283835.1_ASM28383v1	-	Hauke
Geobacillus stearothermophilus	1422	PRJNA252422	252422	Terrabacteria group	Firmicutes	3.26914	52.6	-	JPYV01	178	3177	3042	9/8/14	12/1/14	Contig	THE INSTITUTE OF CYTOLOGY AND GENETICS	SAMN02850071	GCA_000749985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/985/GCA_000749985.1_ASM74998v1	25414504	53
Ralstonia pickettii	329	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	3.8414	63.8	-	DBAD01	368	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450463	GCA_002291515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/515/GCA_002291515.1_ASM229151v1	28894102	-
Lactobacillus helveticus CIRM-BIA 103	1226332	PRJEB1537	200916	Terrabacteria group	Firmicutes	2.00747	36.5	-	CBUM01	191	2116	1692	10/23/13	4/2/17	Scaffold	INRA STLO	SAMEA2271977	GCA_000493335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/335/GCA_000493335.1_LhCIRMBIA103V1	-	CIRM-BIA 103
Salinispora arenicola CNY256	1169166	PRJNA175179	175179	Terrabacteria group	Actinobacteria	5.78112	69.5	-	ARHF01	79	5271	4968	4/19/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441355	GCA_000375165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/165/GCA_000375165.1_ASM37516v1	-	CNY256
Lactobacillus casei A2-362	1051653	PRJNA218804	218804	Terrabacteria group	Firmicutes	3.18668	46.2	-	AZOE01	162	3474	3088	12/17/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597184	GCA_000510825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/510/825/GCA_000510825.1_ASM51082v1	-	A2-362
Coxiella burnetii	777	PRJNA310186	310186	Proteobacteria	Gammaproteobacteria	2.01357	42.6369	chromosome:NZ_CP014354.1/CP014354.1; plasmid unnamed:NZ_CP014355.1/CP014355.1	-	2	2158	1937	2/25/16	5/3/16	Chromosome	Central Veterinary Institute part of Wageningen UR	SAMN04448129	GCA_001572765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/765/GCA_001572765.1_ASM157276v1	-	3345937
Moraxella catarrhalis	480	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	1.90792	41.6	chromosome:NZ_CP020400.1/CP020400.1	-	1	1768	1607	3/29/17	4/6/17	Complete Genome	US Food and Drug Administration 	SAMN04875550	GCA_002073215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/215/GCA_002073215.1_ASM207321v1	-	FDAARGOS_213
Acinetobacter larvae	1789224	PRJNA338199	338199	Proteobacteria	Gammaproteobacteria	3.7411	41.6	chromosome:NZ_CP016895.1/CP016895.1	-	1	3327	3133	8/12/16	4/6/17	Complete Genome	Biogas Institute of Ministry of Agriculture	SAMN05520995	GCA_001704115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/115/GCA_001704115.1_ASM170411v1	-	BRTC-1
Aeromonas salmonicida	645	PRJNA314146	314146	Proteobacteria	Gammaproteobacteria	4.79029	58.6	-	LUHO01	236	4581	4149	4/14/17	4/21/17	Scaffold	"Institute of hydrobiology, chinese academy of sciences"	SAMN04529529	GCA_002093695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/695/GCA_002093695.1_ASM209369v1	27493011	BG
Streptococcus mitis SK1080	1008453	PRJNA66113	66113	Terrabacteria group	Firmicutes	1.94375	40.3	-	AFQV01	34	2005	1767	7/6/11	3/30/17	Contig	J. Craig Venter Institute	SAMN00621705	GCA_000220085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/085/GCA_000220085.2_ASM22008v2	-	SK1080
Oenococcus oeni AWRIB568	1206774	PRJNA169943	169943	Terrabacteria group	Firmicutes	1.87487	38	-	ALAJ01	31	1926	1773	8/9/12	3/23/17	Contig	The Australian Wine Research Institute	SAMN02471118	GCA_000286255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/255/GCA_000286255.1_AWRIB568_v1	22863143	AWRIB568
Bacteroides dorei CL03T12C01	997877	PRJNA285067	285067	FCB group	Bacteroidetes/Chlorobi group	5.31037	41.6	chromosome:NZ_CP011531.1/CP011531.1	-	1	4452	4151	5/9/16	4/5/17	Complete Genome	University of Florida	SAMN03737480	GCA_001640865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/865/GCA_001640865.1_ASM164086v1	-	CL03T12C01
Campylobacter fetus subsp. venerealis 642-21	1167640	PRJNA156701	156701	Proteobacteria	delta/epsilon subdivisions	1.94357	33.1	-	AJSG01	126	2031	1887	8/27/14	4/2/17	Scaffold	"Centre for Comparative Genomics, Murdoch University"	SAMN03009824	GCA_000744025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/025/GCA_000744025.1_CfvI642-21_v1.0	25278524	642-21
Bacillus sp. WP8	756828	PRJNA268247	268247	Terrabacteria group	Firmicutes	3.70889	41.6	chromosome:NZ_CP010075.1/CP010075.1	-	1	3807	3639	12/11/14	4/17/17	Complete Genome	Yancheng Teachers University	SAMN03217316	GCA_000800825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/825/GCA_000800825.1_ASM80082v1	25614565	WP8
Bartonella bacilliformis Ver075	1293904	PRJNA189513	189513	Proteobacteria	Alphaproteobacteria	1.41319	38.2	-	ASIY01	4	1239	1139	6/17/14	4/3/17	Scaffold	Broad Institute	SAMN01921137	GCA_000709855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/855/GCA_000709855.1_Bart_baci_Ver075_V1	-	Ver075
Leptospira borgpetersenii serovar Javanica str. MK146	1049766	PRJNA74095	74095	Spirochaetes	Spirochaetia	3.88637	40.1	-	AHNG02	36	3723	3434	1/24/12	4/1/17	Contig	J. Craig Venter Institute	SAMN02436588	GCA_000244075.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/075/GCA_000244075.3_gls454090v2.0	-	MK146
Moraxella catarrhalis	480	PRJNA235932	235932	Proteobacteria	Gammaproteobacteria	1.88797	41.6	chromosome:NZ_CP007669.1/CP007669.1	-	1	1762	1640	10/14/14	4/2/17	Complete Genome	Griffith University	SAMN02595593	GCA_000766665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/766/665/GCA_000766665.1_ASM76666v1	25183669	25239
Bacteroides dorei	357276	PRJNA232731	232731	FCB group	Bacteroidetes/Chlorobi group	5.24322	41.6	chromosome:CP008741.1	-	1	4186	4024	8/6/14	8/6/14	Complete Genome	University of Florida	SAMN02679418	GCA_000738065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/065/GCA_000738065.1_ASM73806v1	-	-
Anaplasma phagocytophilum str. HZ2	1184253	PRJNA163167	163167	Proteobacteria	Alphaproteobacteria	1.47758	41.6	chromosome:NC_021879.1/CP006616.1	-	1	1176	1063	7/24/13	4/1/17	Complete Genome	University of Florida	SAMN02604172	GCA_000439755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/755/GCA_000439755.1_ASM43975v1	-	HZ2
Anaplasma phagocytophilum str. JM	1173064	PRJNA158483	158483	Proteobacteria	Alphaproteobacteria	1.4816	41.6	chromosome:NC_021880.1/CP006617.1	-	1	1176	1065	7/24/13	4/1/17	Complete Genome	University of Florida	SAMN02604171	GCA_000439775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/775/GCA_000439775.1_ASM43977v1	-	JM
Streptococcus salivarius M18	1074494	PRJNA71499	71499	Terrabacteria group	Firmicutes	2.32598	39.4515	plasmid pSsal-M18:NZ_AGBV01000006.1/AGBV01000006.1	AGBV01	6	2203	2029	9/6/11	3/30/17	Contig	University of Otago	SAMN02471912	GCA_000225385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/385/GCA_000225385.2_ASM22538v2	-	M18
Shigella boydii 08-6341	1212576	PRJNA171083	171083	Proteobacteria	Gammaproteobacteria	4.80075	51.1	-	AMKD01	138	5406	4279	1/6/15	8/4/17	Contig	Institute for Genome Sciences	SAMN03276473	GCA_000815765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/765/GCA_000815765.1_ASM81576v1	-	Aug-41
Clostridioides difficile QCD-66c26	455631	PRJNA20093	20093	Terrabacteria group	Firmicutes	4.12775	28.5243	chromosome:NZ_CM000441.1/CM000441.2	ABFD02	15	3774	3657	8/30/07	5/18/17	Chromosome	McGill University	SAMN02470531	GCA_000003215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/003/215/GCA_000003215.1_ASM321v1	-	-
Streptococcus parasanguinis FW213	1114965	PRJNA76769	76769	Terrabacteria group	Firmicutes	2.17161	41.6	chromosome:NC_017905.1/CP003122.1	-	1	2117	1964	5/9/12	3/30/17	Complete Genome	Chang Gung University	SAMN02603112	GCA_000262145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/145/GCA_000262145.1_ASM26214v1	22529932	FW213
Candidatus Pelagibacter ubique	198252	PRJEB9287	287342	Proteobacteria	Alphaproteobacteria	0.551717	29.4	-	CVSC01	95	636	559	6/17/15	8/1/17	Contig	UNIVERSITY OF CALIFORNIA - SAN DIEGO	SAMEA3368554	GCA_001179865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/865/GCA_001179865.1_CLC_assembled_contigs	-	SCGC AAA795-B16
Corynebacterium jeikeium	38289	PRJNA238244	238244	Terrabacteria group	Actinobacteria	2.37671	61.7	-	JFCN01	65	2106	1951	8/6/14	4/2/17	Contig	University of Washington	SAMN02641060	GCA_000738325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/325/GCA_000738325.1_Cj47446	25116839	Cj47446
Streptococcus equi subsp. zooepidemicus ATCC 35246	1051072	PRJNA68327	68327	Terrabacteria group	Firmicutes	2.16726	41.6	chromosome:NC_017582.1/CP002904.1	-	1	2060	1894	6/30/11	3/22/17	Complete Genome	big	SAMN02603034	GCA_000219765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/765/GCA_000219765.1_ASM21976v1	21914890	ATCC 35246
Desulfotomaculum acetoxidans DSM 771	485916	PRJNA27947	27947	Terrabacteria group	Firmicutes	4.54562	41.6	chromosome:NC_013216.1/CP001720.1	-	1	4286	4007	9/10/09	6/15/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598455	GCA_000024205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/205/GCA_000024205.1_ASM2420v1	21304664	DSM 771
Shewanella frigidimarina NCIMB 400	318167	PRJNA13391	13391	Proteobacteria	Gammaproteobacteria	4.84526	41.6	chromosome:NC_008345.1/CP000447.1	-	1	4204	4024	9/14/06	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02598301	GCA_000014705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/705/GCA_000014705.1_ASM1470v1	-	NCIMB 400
Anaplasma phagocytophilum str. HZ	212042	PRJNA336	336	Proteobacteria	Alphaproteobacteria	1.47128	41.6	chromosome:NC_007797.1/CP000235.1	-	1	1178	1066	2/21/06	3/29/17	Complete Genome	TIGR	SAMN02604015	GCA_000013125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/125/GCA_000013125.1_ASM1312v1	"1,648,222,721,687,410"	HZ
Bacillus pumilus	1408	PRJNA356109	356109	Terrabacteria group	Firmicutes	3.7409	41.5877	chromosome:NZ_CP018574.1/CP018574.1; plasmid unnamed:NZ_CP018575.1/CP018575.1	-	2	3915	3753	12/19/16	4/6/17	Complete Genome	Bacillus pumilus	SAMN06106541	GCA_001908475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/475/GCA_001908475.1_ASM190847v1	-	GLB197
Moraxella catarrhalis	480	PRJNA350869	350869	Proteobacteria	Gammaproteobacteria	1.99439	41.5581	chromosome:NZ_CP018059.1/CP018059.1; plasmid unnamed:NZ_CP018060.1/CP018060.1	-	2	1900	1775	4/5/17	4/8/17	Complete Genome	Griffith University	SAMN05949222	GCA_002080125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/125/GCA_002080125.1_ASM208012v1	-	CCRI-195ME
Providencia stuartii	588	PRJNA244575	244575	Proteobacteria	Gammaproteobacteria	4.33482	41.5147	chromosome:NZ_CP008920.1/CP008920.1; plasmid unnamed:NZ_CP008919.1/CP008919.1	-	2	4016	3780	9/12/14	4/2/17	Complete Genome	Los Alamos National Laboratory	SAMN02904571	GCA_000754345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/345/GCA_000754345.1_ASM75434v1	25342690	ATCC 33672
Candidatus Nanopelagicus limnes	1884634	PRJNA327031	327031	Terrabacteria group	Actinobacteria	1.23798	41.5	chromosome:NZ_CP016768.1/CP016768.1	-	1	1267	1219	9/8/17	9/11/17	Complete Genome	University of Zurich	SAMN05296520	GCA_002287885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/885/GCA_002287885.1_ASM228788v1	-	-
Lactobacillus reuteri DSM 20016	557436	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.93586	38.6	-	AZDD01	150	1966	1863	11/6/15	4/4/17	Scaffold	Shanghai Majorbio	SAMN02369412	GCA_001434615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/615/GCA_001434615.1_ASM143461v1	26415554	DSM 20016
Shigella dysenteriae	622	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.07802	50.9	-	MSJV02	299	4437	3856	1/4/17	3/4/17	Scaffold	University of California at Davis	SAMN03358409	GCA_001933095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/933/095/GCA_001933095.2_ASM193309v2	-	BCW_4871
Anaplasma marginale str. Oklahoma	1000938	PRJNA64641	64641	Proteobacteria	Alphaproteobacteria	1.15692	49.8	-	AFMX01	57	1022	919	5/31/11	3/30/17	Contig	University of Florida College of Veterinary Medicine	SAMN02469631	GCA_000215565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/565/GCA_000215565.2_ASM21556v2	21596083	Oklahoma
Sporosarcina ureae	1571	PRJNA317492	317492	Terrabacteria group	Firmicutes	3.41243	41.5	chromosome:NZ_CP015109.1/CP015109.1	-	1	3330	3198	4/7/17	4/13/17	Complete Genome	California State University Northridge	SAMN04619968	GCA_002082015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/015/GCA_002082015.1_ASM208201v1	-	P17a
Bacteroides fragilis CL07T12C05	997883	PRJNA64821	64821	FCB group	Bacteroidetes/Chlorobi group	5.44455	43.6	-	AGXN01	11	4910	4633	6/25/12	5/18/17	Scaffold	Broad Institute	SAMN02463926	GCA_000273155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/155/GCA_000273155.1_Bact_frag_CL07T12C05_V1	-	CL07T12C05
Shigella sonnei str. Moseley	754077	PRJNA48261	48261	Proteobacteria	Gammaproteobacteria	5.14598	50.7	-	AGRD01	115	5805	4598	7/27/12	8/4/17	Contig	Institute for Genome Sciences	SAMN00017655	GCA_000281815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/815/GCA_000281815.1_ASM28181v1	-	Moseley
Sporosarcina ureae	1571	PRJNA317479	317479	Terrabacteria group	Firmicutes	3.36233	41.5	chromosome:NZ_CP015108.1/CP015108.1	-	1	3306	3146	4/7/17	4/13/17	Complete Genome	California State University Northridge	SAMN04613821	GCA_002081995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/995/GCA_002081995.1_ASM208199v1	-	S204
Bacillus safensis	561879	PRJNA320863	320863	Terrabacteria group	Firmicutes	3.73518	41.5	chromosome:NZ_CP015610.1/CP015610.1	-	1	3878	3702	1/6/17	4/6/17	Complete Genome	New England Biolabs	SAMN04958703	GCA_001938685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/685/GCA_001938685.1_ASM193868v1	-	U41
Histophilus somni	731	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.26391	37.3	-	LQFM01	60	2131	1979	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366560	GCA_001930775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/775/GCA_001930775.1_ASM193077v1	-	3171HS
Bacillus safensis	561879	PRJNA320863	320863	Terrabacteria group	Firmicutes	3.7418	41.5	chromosome:NZ_CP015611.1/CP015611.1	-	1	3891	3704	1/6/17	4/6/17	Complete Genome	New England Biolabs	SAMN04958521	GCA_001938705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/705/GCA_001938705.1_ASM193870v1	-	U17-1
Bacillus xiamenensis	1178537	PRJNA349777	349777	Terrabacteria group	Firmicutes	3.63773	41.5	chromosome:NZ_CP017786.1/CP017786.1	-	1	3810	3551	10/31/16	4/13/17	Complete Genome	King Saud University	SAMN05933005	GCA_001857925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/925/GCA_001857925.1_ASM185792v1	-	VV3
Flavisolibacter sp. LCS9	1492898	PRJNA272876	272876	FCB group	Bacteroidetes/Chlorobi group	5.94086	41.5	chromosome:NZ_CP011390.1/CP011390.1	-	1	5014	4892	5/16/16	4/12/17	Complete Genome	Seoul Women's University	SAMN03287577	GCA_001644645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/645/GCA_001644645.1_ASM164464v1	-	LCS9
Methanosarcina mazei WWM610	1434117	PRJNA230950	230950	Euryarchaeota	Methanomicrobia	4.09648	41.5	chromosome:NZ_CP009509.1/CP009509.1	-	1	3508	3310	4/7/15	4/3/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN03074586	GCA_000970165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/165/GCA_000970165.1_ASM97016v1	-	WWM610
Methanosarcina mazei SarPi	1434115	PRJNA230948	230948	Euryarchaeota	Methanomicrobia	4.06655	41.5	chromosome:NZ_CP009511.1/CP009511.1	-	1	3460	3286	4/7/15	4/3/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN03074584	GCA_000970185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/185/GCA_000970185.1_ASM97018v1	-	SarPi
Methanosarcina mazei C16	1434113	PRJNA230945	230945	Euryarchaeota	Methanomicrobia	4.16624	41.5	chromosome:NZ_CP009514.1/CP009514.1	-	1	3569	3343	4/7/15	4/3/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN03074581	GCA_000970245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/245/GCA_000970245.1_ASM97024v1	-	C16
Methylacidiphilum fumariolicum SolV	1156937	PRJEB6910	263109	PVC group	Verrucomicrobia	2.47667	41.5	chromosome Strain_SolV_genome_(final):NZ_LM997411.1/LM997411.1	-	1	2349	2225	10/4/14	3/15/17	Complete Genome	LEIDEN UNIVERSITY MEDICAL CENTER	SAMEA2682029	GCA_000953475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/475/GCA_000953475.1_MfumSolVChr1	-	-
Moraxella catarrhalis	480	PRJNA244569	244569	Proteobacteria	Gammaproteobacteria	1.94157	41.5	chromosome:NZ_CP008804.1/CP008804.1	-	1	1790	1672	8/15/14	4/2/17	Complete Genome	Los Alamos National Laboratory	SAMN02870719	GCA_000740455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/455/GCA_000740455.1_ASM74045v1	25237030	25240
Bacteroidales bacterium CF	1400053	PRJNA218492	218492	FCB group	Bacteroidetes/Chlorobi group	2.65725	41.5	chromosome:NZ_CP006772.1/CP006772.1	-	1	2310	2242	9/30/13	4/9/17	Complete Genome	University of Toronto	SAMN02641638	GCA_000473305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/305/GCA_000473305.1_ASM47330v1	24356833	CF
Agrobacterium tumefaciens F2	1050720	PRJNA68421	68421	Proteobacteria	Alphaproteobacteria	5.4657	59.4462	plasmid unnamed p1:NZ_AFSD01000007.1/AFSD01000007.1; plasmid unnamed p2:NZ_AFSD01000008.1/AFSD01000008.1	AFSD01	8	5290	5085	6/29/11	5/18/17	Contig	"School of Municipal and Environmental Engineering, Harbin Institute of Technology"	SAMN02469870	GCA_000219665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/665/GCA_000219665.2_ASM21966v2	21914861	F2
Chlamydia trachomatis RC-F(s)/852	907265	PRJNA53849	53849	PVC group	Chlamydiae	1.08389	41.5	chromosome:NC_021888.1/CP002673.1	-	1	1003	925	7/26/13	3/24/17	Complete Genome	Oregon State University	SAMN02603699	GCA_000441635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/635/GCA_000441635.1_ASM44163v1	23786423	RC-F(s)/852
Chlamydia trachomatis RC-F(s)/342	907269	PRJNA53857	53857	PVC group	Chlamydiae	1.08384	41.5	chromosome:NC_021890.1/CP002677.1	-	1	1001	921	7/26/13	3/24/17	Complete Genome	Oregon State University	SAMN02603703	GCA_000441715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/715/GCA_000441715.1_ASM44171v1	23786423	RC-F(s)/342
Chlamydia trachomatis RC-J(s)/122	907270	PRJNA53859	53859	PVC group	Chlamydiae	1.06185	41.5	chromosome:NC_021891.1/CP002678.1	-	1	991	918	7/26/13	3/24/17	Complete Genome	Oregon State University	SAMN02603704	GCA_000441735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/735/GCA_000441735.1_ASM44173v1	23786423	RC-J(s)/122
Chlamydia trachomatis J/6276tet1	907272	PRJNA53863	53863	PVC group	Chlamydiae	1.08095	41.5	chromosome:NC_021892.1/CP002680.1	-	1	998	931	7/26/13	3/24/17	Complete Genome	Oregon State University	SAMN02603706	GCA_000441775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/775/GCA_000441775.1_ASM44177v1	23786423	J/6276tet1
Kosmotoga olearia TBF 19.5.1	521045	PRJNA29419	29419	Thermotogae	Thermotogae	2.30213	41.5	chromosome:NC_012785.1/CP001634.1	-	1	2193	2109	6/8/09	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00001868	GCA_000023325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/325/GCA_000023325.1_ASM2332v1	21914881	TBF 19.5.1
Actinobacillus pleuropneumoniae serovar 12 str. 1096	754261	PRJNA47307	47307	Proteobacteria	Gammaproteobacteria	2.19415	41.2	-	ADOL01	63	2109	1985	9/13/10	3/30/17	Contig	Huazhong Agricultural University	SAMN02469623	GCA_000178635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/635/GCA_000178635.1_ASM17863v1	20802045	1096
Leptospira interrogans serovar Canicola	211880	PRJNA376496	376496	Spirochaetes	Spirochaetia	4.57069	35	chromosome I:CP022883.1; chromosome II:CP022884.1	-	2	4155	3278	8/24/17	9/8/17	Chromosome	Universidade Federal de Pelotas	SAMN06434252	GCA_002269215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/215/GCA_002269215.1_ASM226921v1	-	DU114
[Eubacterium rectale] ATCC 33656	515619	PRJNA29071	29071	Terrabacteria group	Firmicutes	3.44969	41.5	chromosome:NC_012781.1/CP001107.1	-	1	3366	3173	6/4/09	8/28/17	Complete Genome	"Center for Genome Sciences, Washington University School of Medicine"	SAMN02603082	GCA_000020605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/605/GCA_000020605.1_ASM2060v1	19321416	ATCC 33656
Streptococcus equi subsp. zooepidemicus	40041	PRJEA30767	30767	Terrabacteria group	Firmicutes	2.14987	41.5	chromosome:NC_012470.1/FM204884.1	-	1	2049	1901	3/26/09	5/28/17	Complete Genome	The Wellcome Trust Sanger Institute	SAMEA2272197	GCA_000026605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/605/GCA_000026605.1_ASM2660v1	19325880	H70
Methanosarcina mazei Go1	192952	PRJNA300	300	Euryarchaeota	Methanomicrobia	4.09635	41.5	chromosome:NC_003901.1/AE008384.1	-	1	3507	3347	8/22/01	3/29/17	Complete Genome	Gottingen Genomics Laboratory	SAMN02603290	GCA_000007065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/065/GCA_000007065.1_ASM706v1	12125824	Go1
Nostoc sp. PCC 7524	28072	PRJNA158707	158707	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.71887	41.4991	chromosome:NC_019684.1/CP003552.1; plasmid pNOS7524.01:NC_019677.1/CP003553.1; plasmid pNOS7524.02:NC_019685.1/CP003554.1	-	3	5655	5405	12/4/12	5/19/17	Complete Genome	JGI	SAMN02261333	GCA_000316645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/645/GCA_000316645.1_ASM31664v1	-	PCC 7524
Bacillus pumilus	1408	PRJNA276289	276289	Terrabacteria group	Firmicutes	3.87881	41.4612	chromosome:NZ_CP011007.1/CP011007.1; plasmid pSHB9:NZ_CP011023.1/CP011023.1	-	2	3998	3843	3/1/16	4/10/17	Complete Genome	Wageningen University	SAMN03372270	GCA_001578205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/205/GCA_001578205.1_ASM157820v1	-	SH-B9
Sporosarcina ureae	1571	PRJNA317681	317681	Terrabacteria group	Firmicutes	3.38274	41.4	chromosome:NZ_CP015348.1/CP015348.1	-	1	3323	3182	4/25/17	4/27/17	Complete Genome	California State University Northridge	SAMN04623203	GCA_002109325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/325/GCA_002109325.1_ASM210932v1	-	P32a
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.56164	41.4	chromosome I:LT671674.1	-	1	-	-	12/9/16	12/9/16	Complete Genome	UNIVERSITY OF CAMBRIDGE	SAMEA19981168	GCA_900143575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/575/GCA_900143575.1_LS9N	-	LS9N
Algoriphagus sp. M8-2	1727163	PRJNA296932	296932	FCB group	Bacteroidetes/Chlorobi group	3.88261	41.4	chromosome:NZ_CP012836.1/CP012836.1	-	1	3403	3332	3/17/16	4/12/17	Complete Genome	Shizuoka University	SAMN04111281	GCA_001593605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/605/GCA_001593605.1_ASM159360v1	27174266	M8-2
Tropheryma whipplei str. Art29	1294033	PRJEB1450	189647	Terrabacteria group	Actinobacteria	0.927595	46.3	-	CAUU02	1	867	773	3/28/13	4/2/17	Scaffold	URMITE	SAMEA2272300	GCA_000359285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/285/GCA_000359285.2_G166	-	Art29
Bacillus pumilus	1408	PRJDB4002	302143	Terrabacteria group	Firmicutes	3.72343	41.4	chromosome Unknown:NZ_AP014928.1/AP014928.1	-	1	3888	3732	11/11/15	4/4/17	Complete Genome	Tokyo University of Agriculture and Technology	SAMD00032095	GCA_001548215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/215/GCA_001548215.1_ASM154821v1	-	TUAT1
Bacillus pumilus	1408	PRJNA278492	278492	Terrabacteria group	Firmicutes	3.74512	41.4	chromosome:NZ_CP011150.1/CP011150.1	-	1	3901	3758	4/16/15	4/3/17	Complete Genome	Jiangnan University	SAMN03420843	GCA_000972685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/685/GCA_000972685.1_ASM97268v1	-	W3
Clostridium perfringens	1502	PRJNA341531	341531	Terrabacteria group	Firmicutes	3.41555	28.1	chromosome:CP017106.1	-	1	3116	2978	9/8/17	9/8/17	Chromosome	RMIT University	SAMN05725818	GCA_002287985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/985/GCA_002287985.1_ASM228798v1	-	EHE-NE18
Xanthomonas campestris pv. campestris str. CFBP 1869	1357999	PRJNA211743	211743	Proteobacteria	Gammaproteobacteria	5.01873	65.0858	chromosome:NZ_CM002545.1/CM002545.1; plasmid unnamed1:NZ_CM002546.1/CM002546.1	AVDD01	5	4489	4166	3/11/14	4/5/17	Chromosome	CNRS	SAMN02645655	GCA_000589915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/915/GCA_000589915.1_20120412	26383661	CFBP 1869
Methanosarcina mazei S-6	213585	PRJNA230947	230947	Euryarchaeota	Methanomicrobia	4.14282	41.4	chromosome:NZ_CP009512.1/CP009512.1	-	1	3551	3359	4/7/15	4/3/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN03074583	GCA_000970205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/205/GCA_000970205.1_ASM97020v1	-	S-6
Methanosarcina mazei LYC	1434114	PRJNA230946	230946	Euryarchaeota	Methanomicrobia	4.15434	41.4	chromosome:NZ_CP009513.1/CP009513.1	-	1	3578	3384	4/7/15	4/3/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN03074582	GCA_000970225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/225/GCA_000970225.1_ASM97022v1	-	LYC
Staphylococcus epidermidis BVS058A4	883130	PRJNA52117	52117	Terrabacteria group	Firmicutes	2.61072	32	-	AGZV01	17	2566	2378	11/6/12	3/23/17	Scaffold	Broad Institute	SAMN02463887	GCA_000314715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/715/GCA_000314715.2_Stap_epid_BVS058A4_V1	-	BVS058A4
Gardnerella vaginalis ATCC 14018 = JCM 11026	585528	PRJDB63	275717	Terrabacteria group	Actinobacteria	1.66741	41.4	chromosome Unknown:NZ_AP012332.1/AP012332.1	-	1	1425	1319	2/17/15	4/3/17	Complete Genome	"Graduate School of Frontier Sciences, University of Tokyo"	SAMD00061047	GCA_001042655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/655/GCA_001042655.1_ASM104265v1	25858849	JCM 11026
Bacillus pumilus	1408	PRJNA239250	239250	Terrabacteria group	Firmicutes	3.76349	41.4	chromosome:NZ_CP007436.1/CP007436.1	-	1	3902	3721	3/12/14	4/2/17	Complete Genome	University of Manitoba	SAMN02677288	GCA_000590455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/455/GCA_000590455.1_ASM59045v1	24744340	MTCC B6033
Desulfobacula toluolica Tol2	651182	PRJEA38433	38433	Proteobacteria	delta/epsilon subdivisions	5.19791	41.4	chromosome:NC_018645.1/FO203503.1	-	1	4669	4545	9/17/12	5/18/17	Complete Genome	Max Planck Society	SAMEA2272293	GCA_000307105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/105/GCA_000307105.1_ASM30710v1	23088741	Tol2
Streptococcus suis S735	1184252	PRJNA163139	163139	Terrabacteria group	Firmicutes	1.98089	41.4	chromosome:NC_018526.1/CP003736.1	-	1	1981	1839	9/4/12	3/15/17	Complete Genome	Universite Laval	SAMN02604110	GCA_000294495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/495/GCA_000294495.1_ASM29449v1	23105076	S735
Streptococcus suis ST1	1004951	PRJNA65471	65471	Terrabacteria group	Firmicutes	2.03432	41.4	chromosome:NC_017950.1/CP002651.1	-	1	2095	1855	10/25/11	8/4/17	Complete Genome	Huazhong Agricultural University	SAMN02603323	GCA_000231925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/925/GCA_000231925.1_ASM23192v1	22026465	ST1
Muricauda ruestringensis DSM 13258	886377	PRJNA52467	52467	FCB group	Bacteroidetes/Chlorobi group	3.84242	41.4	chromosome:NC_015945.1/CP002999.1	-	1	3459	3385	8/19/11	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02232041	GCA_000224085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/085/GCA_000224085.1_ASM22408v1	22768362	DSM 13258
Gardnerella vaginalis ATCC 14019	525284	PRJNA31473	31473	Terrabacteria group	Actinobacteria	1.66735	41.4	chromosome:NC_014644.1/CP002104.1	-	1	1421	1365	11/3/10	8/3/16	Complete Genome	Baylor College of Medicine	SAMN00001462	GCA_000159155.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/155/GCA_000159155.2_ASM15915v2	20865041	ATCC 14019
Streptococcus suis GZ1	423211	PRJNA18737	18737	Terrabacteria group	Firmicutes	2.03803	41.4	chromosome:NC_017617.1/CP000837.1	-	1	2043	1869	3/30/10	3/15/17	Complete Genome	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02603644	GCA_000018185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/185/GCA_000018185.1_ASM1818v1	19016627	GZ1
Bacillus safensis	561879	PRJNA320863	320863	Terrabacteria group	Firmicutes	4.15132	41.3962	chromosome:NZ_CP015607.1/CP015607.1; plasmid unnamed1:NZ_CP015608.1/CP015608.1; plasmid unnamed2:NZ_CP015609.1/CP015609.1	-	3	4351	3981	1/6/17	4/6/17	Complete Genome	New England Biolabs	SAMN04958657	GCA_001938665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/665/GCA_001938665.1_ASM193866v1	-	U14-5
Bacillus pumilus	1408	PRJNA254770	254770	Terrabacteria group	Firmicutes	3.68178	41.3913	chromosome:NZ_CP009108.1/CP009108.1; plasmid pGR8:NZ_CP009109.1/CP009109.1	-	2	3833	3681	8/3/15	4/3/17	Complete Genome	Wuhan Institute of Virology	SAMN02905161	GCA_001191605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/605/GCA_001191605.1_ASM119160v1	-	GR-8
Trichormus variabilis ATCC 29413	240292	PRJNA10642	10642	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.10575	41.3911	chromosome:CP000117.1; chromosome Incision-element:CP000118.1; plasmid A:CP000119.1; plasmid B:CP000120.1; plasmid C:CP000121.1	-	5	5808	5706	9/15/05	1/28/14	Complete Genome	DOE Joint Genome Institute	SAMN02598253	GCA_000204075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/075/GCA_000204075.1_ASM20407v1	-	ATCC 29413
Bacillus safensis	561879	PRJNA353573	353573	Terrabacteria group	Firmicutes	3.97256	41.3621	chromosome:NZ_CP018197.1/CP018197.1; plasmid pBPL056:NZ_CP018198.1/CP018198.1	-	2	4088	3904	12/9/16	4/6/17	Complete Genome	Yeungnam University	SAMN06016472	GCA_001895885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/885/GCA_001895885.1_ASM189588v1	-	KCTC 12796BP
Staphylococcus epidermidis M0881	1213731	PRJNA171275	171275	Terrabacteria group	Firmicutes	2.67828	32.3	-	AOAJ01	9	2639	2473	4/9/13	4/10/17	Scaffold	Broad Institute	SAMN01047814	GCA_000362145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/145/GCA_000362145.1_Stap_aure_M0881_V1	-	M0881
Nostoc punctiforme PCC 73102	63737	PRJNA216	216	Terrabacteria group	Cyanobacteria/Melainabacteria group	9.05919	41.3416	chromosome:NC_010628.1/CP001037.1; plasmid pNPUN01:NC_010631.1/CP001038.1; plasmid pNPUN02:NC_010632.1/CP001039.1; plasmid pNPUN03:NC_010630.1/CP001040.1; plasmid pNPUN04:NC_010633.1/CP001041.1; plasmid pNPUN05:NC_010629.1/CP001042.1	-	6	7548	6984	4/24/08	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598449	GCA_000020025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/025/GCA_000020025.1_ASM2002v1	23463784	ATCC 29133; PCC 73102
Streptococcus equi subsp. equi	148942	PRJNA388268	388268	Terrabacteria group	Firmicutes	2.27207	41.3	chromosome:CP021972.1	-	1	2294	2208	6/20/17	6/20/17	Complete Genome	Korea Basic Science Institute	SAMN07173892	GCA_002202295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/295/GCA_002202295.1_ASM220229v1	-	ATCC 39506
Xanthomonas campestris pv. campestris str. CFBP 5817	1358009	PRJNA211770	211770	Proteobacteria	Gammaproteobacteria	4.97552	65.0571	chromosome:NZ_CM002673.1/CM002673.1; plasmid unnamed1:NZ_CM002674.1/CM002674.1	AVDL01	12	4447	4122	3/11/14	4/5/17	Chromosome	CNRS	SAMN02645658	GCA_000590075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/075/GCA_000590075.1_20130205	26383661	CFBP 5817
Clostridium perfringens F262	883064	PRJNA51969	51969	Terrabacteria group	Firmicutes	3.46841	28.0364	chromosome:NZ_CM001477.1/CM001477.1; plasmid pF262A:NZ_CM001478.1/CM001478.1; plasmid pF262B:NZ_CM001479.1/CM001479.1; plasmid pF262C:NZ_CM001480.1/CM001480.1; plasmid pF262D:NZ_CM001481.1/CM001481.1	AFES01	14	3170	3043	3/14/12	3/30/17	Chromosome	University of Guelph	SAMN00199225	GCA_000255475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/475/GCA_000255475.1_ASM25547v1	22412860	F262
Chlamydia trachomatis	813	PRJNA315548	315548	PVC group	Chlamydiae	1.04239	41.3	chromosome:NZ_CP020535.1/CP020535.1	-	1	966	900	4/12/17	4/16/17	Complete Genome	Public Health Agency of Canada	SAMN04565661	GCA_002088315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/315/GCA_002088315.1_ASM208831v1	-	chxRP4F1
Chlamydia trachomatis	813	PRJNA315548	315548	PVC group	Chlamydiae	1.04237	41.3	chromosome:NZ_CP020536.1/CP020536.1	-	1	966	904	4/12/17	4/16/17	Complete Genome	Public Health Agency of Canada	SAMN04565660	GCA_002088335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/335/GCA_002088335.1_ASM208833v1	-	chxRP4D10
Tropheryma whipplei str. Pneumo30	1294034	PRJEB1451	189632	Terrabacteria group	Actinobacteria	0.927553	46.4	-	CAUV02	1	872	779	3/28/13	4/2/17	Scaffold	URMITE	SAMEA2272530	GCA_000359305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/305/GCA_000359305.2_G167	-	Pneumo30
Prochlorococcus marinus str. MIT 9202	93058	PRJNA19343	19343	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.69145	31.1	-	ACDW01	1	1881	1807	12/31/08	4/11/17	Scaffold	The Gordon and Betty Moore Foundation Microbial Genome Sequencing project	SAMN02436267	GCA_000158595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/595/GCA_000158595.1_ASM15859v1	-	MIT 9202
Chlamydia trachomatis	813	PRJNA315548	315548	PVC group	Chlamydiae	1.04238	41.3	chromosome:NZ_CP020537.1/CP020537.1	-	1	966	899	4/12/17	4/16/17	Complete Genome	Public Health Agency of Canada	SAMN04565659	GCA_002088355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/355/GCA_002088355.1_ASM208835v1	-	chxRP1H1
Sulfurospirillum halorespirans DSM 13726	1193502	PRJNA167309	167309	Proteobacteria	delta/epsilon subdivisions	3.02984	41.3	chromosome:NZ_CP017111.1/CP017111.1	-	1	3035	2967	9/13/16	9/8/17	Complete Genome	Friedrich-Schiller-University of Jena	SAMN05726051	GCA_001723605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/605/GCA_001723605.1_ASM172360v1	-	DSM 13726; PCE-M2
Pedobacter steynii	430522	PRJNA339039	339039	FCB group	Bacteroidetes/Chlorobi group	6.58166	41.3	chromosome:NZ_CP017141.1/CP017141.1	-	1	5504	5375	9/8/16	4/13/17	Complete Genome	"Northwest Institute of Eco-environment and Resources, CAS"	SAMN05582931	GCA_001721645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/645/GCA_001721645.1_ASM172164v1	-	DX4
Streptococcus suis	1307	PRJNA337985	337985	Terrabacteria group	Firmicutes	2.13188	41.3	chromosome:NZ_CP017142.1/CP017142.1	-	1	2144	1966	9/8/16	3/20/17	Complete Genome	Nanjing Agricultural University	SAMN05567566	GCA_001721625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/625/GCA_001721625.1_ASM172162v1	-	GZ0565
Streptococcus himalayensis	1888195	PRJNA338655	338655	Terrabacteria group	Firmicutes	2.27547	41.3	chromosome:NZ_CP016953.1/CP016953.1	-	1	2164	2019	8/23/16	4/13/17	Complete Genome	"National Institute for Communicable Disease Control and Prevention, China CDC"	SAMN05560386	GCA_001708305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/305/GCA_001708305.1_ASM170830v1	-	HTS2
Bacillus pumilus	1408	PRJNA292143	292143	Terrabacteria group	Firmicutes	3.793	41.3	chromosome:NZ_CP012330.1/CP012330.1	-	1	3949	3794	8/8/16	4/5/17	Complete Genome	BioInformatics Center	SAMN03965497	GCA_001700735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/735/GCA_001700735.1_ASM170073v1	-	NJ-V
Streptococcus suis	1307	PRJNA319315	319315	Terrabacteria group	Firmicutes	2.14218	41.3	chromosome:NZ_CP015557.1/CP015557.1	-	1	2147	1960	5/9/16	3/20/17	Complete Genome	Hunan Agricultural University	SAMN04884928	GCA_001640765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/765/GCA_001640765.1_ASM164076v1	-	DN13
Leptospira interrogans serovar Canicola	211880	PRJNA376501	376501	Spirochaetes	Spirochaetia	4.56016	35	chromosome I:CP022885.1; chromosome II:CP022886.1	-	2	4267	2382	8/24/17	9/8/17	Chromosome	Universidade Federal de Pelotas	SAMN06434273	GCA_002269235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/235/GCA_002269235.1_ASM226923v1	-	RUFN
Actinobacillus pleuropneumoniae serovar 13 str. N273	754262	PRJNA47309	47309	Proteobacteria	Gammaproteobacteria	2.25026	41.2	-	ADOM01	68	2165	2069	9/13/10	3/30/17	Contig	Huazhong Agricultural University	SAMN02469618	GCA_000178655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/655/GCA_000178655.1_ASM17865v1	20802045	N273
Bacillus pumilus	1408	PRJNA276290	276290	Terrabacteria group	Firmicutes	3.86009	41.3	chromosome:NZ_CP010997.1/CP010997.1	-	1	3979	3821	3/1/16	4/5/17	Complete Genome	Wageningen University	SAMN03372367	GCA_001578165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/165/GCA_001578165.1_ASM157816v1	-	SH-B11
Providencia stuartii	588	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.3051	41.3	chromosome:NZ_CP014024.1/CP014024.1	-	1	4026	3799	2/11/16	4/4/17	Complete Genome	US Food and Drug Administration 	SAMN03996292	GCA_001558855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/855/GCA_001558855.1_ASM155885v1	-	FDAARGOS_145
Bacillus pumilus	1408	PRJNA291126	291126	Terrabacteria group	Firmicutes	3.79342	41.3	chromosome:NZ_CP012329.1/CP012329.1	-	1	3948	3793	11/4/15	4/4/17	Complete Genome	BioInformatics Center	SAMN03940121	GCA_001431145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/145/GCA_001431145.1_ASM143114v1	-	NJ-M2
Bacillus pumilus	1408	PRJNA293775	293775	Terrabacteria group	Firmicutes	3.78782	41.3	chromosome:NZ_CP012482.1/CP012482.1	-	1	3944	3794	11/4/15	4/4/17	Complete Genome	BioInformatics Center	SAMN04009761	GCA_001431785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/785/GCA_001431785.1_ASM143178v1	-	NJ-V2
Methanosarcina horonobensis HB-1 = JCM 15518	1434110	PRJNA230942	230942	Euryarchaeota	Methanomicrobia	5.01861	41.3	chromosome:NZ_CP009516.1/CP009516.1	-	1	4453	4144	4/7/15	4/10/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN03074578	GCA_000970285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/285/GCA_000970285.1_ASM97028v1	-	HB-1
Agrobacterium tumefaciens CCNWGS0286	1082932	PRJNA72949	72949	Proteobacteria	Alphaproteobacteria	5.21487	59.5	-	AGSM01	49	5020	4814	11/4/11	5/18/17	Contig	Northwest A&F University	SAMN02471547	GCA_000233975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/975/GCA_000233975.2_ASM23397v2	22636006	CCNWGS0286
Fusobacterium nucleatum subsp. polymorphum	76857	PRJNA386717	386717	Fusobacteria	Fusobacteriia	2.63577	26.9	chromosome:NZ_CP021934.1/CP021934.1	-	1	2592	2428	6/20/17	6/22/17	Chromosome	Chosun University	SAMN07125686	GCA_002202115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/115/GCA_002202115.1_ASM220211v1	-	KCOM 1260 (=ChDC F218)
Methanobacterium formicicum	2162	PRJNA49593	49593	Euryarchaeota	Methanobacteria	2.44999	41.3	chromosome:NZ_CP006933.1/CP006933.1	-	1	2420	2342	10/2/14	4/9/17	Complete Genome	PGgRc	SAMN03085433	GCA_000762265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/265/GCA_000762265.1_ASM76226v1	-	BRM9
Draconibacterium orientale	1168034	PRJNA240267	240267	FCB group	Bacteroidetes/Chlorobi group	5.13208	41.3	chromosome:NZ_CP007451.1/CP007451.1	-	1	4224	4074	4/11/14	4/17/17	Complete Genome	Shandong University at Weihai	SAMN02725840	GCA_000626635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/635/GCA_000626635.1_ASM62663v1	-	FH5
Snodgrassella alvi wkB2	1196094	PRJNA167602	167602	Proteobacteria	Betaproteobacteria	2.52798	41.3	chromosome:NZ_CP007446.1/CP007446.1	-	1	2331	2209	3/25/14	4/2/17	Complete Genome	Yale University	SAMN03081540	GCA_000600005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/005/GCA_000600005.1_ASM60000v1	25053814	wkB2
Streptococcus suis YB51	1380773	PRJNA213888	213888	Terrabacteria group	Firmicutes	2.04366	41.3	chromosome:NC_022516.1/CP006645.1	-	1	2060	1874	9/27/13	3/15/17	Complete Genome	China Animal Health and Epidemiology Center	SAMN02603121	GCA_000471985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/985/GCA_000471985.1_ASM47198v1	24179118	YB51
Chlamydia trachomatis	813	PRJNA213111	213111	PVC group	Chlamydiae	1.04259	41.3	chromosome:NC_022117.1/CP006671.1	-	1	966	894	8/21/13	3/24/17	Complete Genome	Oregon State University	SAMN02189829	GCA_000590575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/575/GCA_000590575.1_ASM59057v1	23842467	F/1-93
Chlamydia trachomatis	813	PRJNA213111	213111	PVC group	Chlamydiae	1.04277	41.3	chromosome:NC_022118.1/CP006673.1	-	1	967	901	8/21/13	3/24/17	Complete Genome	Oregon State University	SAMN02189831	GCA_000590615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/615/GCA_000590615.1_ASM59061v1	23842467	F/6-94
Vibrio vulnificus VVyb1(BT3)	748003	PRJNA46727	46727	Proteobacteria	Gammaproteobacteria	5.74561	46.745	chromosome I:NZ_CM001799.1/CM001799.1; chromosome II:NZ_CM001800.1/CM001800.1; plasmid unnamed:NZ_CM001801.1/CM001801.1	AOCM01	86	5231	4839	2/19/13	4/3/17	Chromosome	"Technion - Israel Institute of Technology, Faculty of Biotechnology & Food Engineering, Laboratory of Applied Genomics"	SAMN02471035	GCA_000342305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/305/GCA_000342305.2_vvyb1_bt3.5	23599289	VVyb1(BT3)
Chlamydia pneumoniae B21	1430897	PRJNA230008	230008	PVC group	Chlamydiae	1.23152	40.4541	plasmid pB21:AZNB01000165.1	AZNB01	165	1227	1190	1/7/14	2/28/14	Contig	Queensland University of Technology	SAMN02422692	GCA_000516655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/655/GCA_000516655.1_CpneumoniaeB21_v1	24503994	B21
Histophilus somni	731	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.23347	37.4	-	LQFO01	63	2099	1970	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366562	GCA_001930825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/825/GCA_001930825.1_ASM193082v1	-	3260HS
Bacillus licheniformis WX-02	1126218	PRJNA78935	78935	Terrabacteria group	Firmicutes	4.28682	46.1	chromosome:NZ_CP012110.1/CP012110.1	-	1	4439	4235	7/16/15	4/3/17	Chromosome	State Key Laboratory of Agricultural Microbiology	SAMN02469900	GCA_000258125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/125/GCA_000258125.2_ASM25812v2	22689245	WX-02
Chlamydia trachomatis F/11-96	1340853	PRJNA213111	213111	PVC group	Chlamydiae	1.04285	41.3	chromosome:NC_022107.1/CP006674.1	-	1	966	899	8/21/13	3/24/17	Complete Genome	Oregon State University	SAMN02189832	GCA_000590635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/635/GCA_000590635.1_ASM59063v1	-	F/11-96
Shigella sonnei	624	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.85419	51	-	JTBL01	3	5362	4364	11/14/14	8/4/17	Contig	US Food and Drug Administration 	SAMN02934522	GCA_000783795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/795/GCA_000783795.1_ASM78379v1	-	FDAARGOS_71
Bacteroides fragilis CL05T00C42	997880	PRJNA64815	64815	FCB group	Bacteroidetes/Chlorobi group	5.29049	43.5	-	AGXO01	5	4749	4497	6/25/12	5/18/17	Scaffold	Broad Institute	SAMN02463923	GCA_000273765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/765/GCA_000273765.1_Bact_frag_CL05T00C42_V1	-	CL05T00C42
Chlamydia trachomatis	813	PRJNA213111	213111	PVC group	Chlamydiae	1.04275	41.3	chromosome:NC_022119.1/CP006676.1	-	1	965	901	8/21/13	3/24/17	Complete Genome	Oregon State University	SAMN02189834	GCA_000590675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/675/GCA_000590675.1_ASM59067v1	23842467	D/13-96
Anaplasma marginale str. South Idaho	1000939	PRJNA64643	64643	Proteobacteria	Alphaproteobacteria	1.40943	46.7	-	AFMY01	358	1161	1015	5/31/11	3/30/17	Contig	University of Florida College of Veterinary Medicine	SAMN02469628	GCA_000215585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/585/GCA_000215585.2_ASM21558v2	21596083	South Idaho
Chlamydia trachomatis	813	PRJNA213111	213111	PVC group	Chlamydiae	1.04321	41.3	chromosome:NC_022121.1/CP006680.1	-	1	965	901	8/21/13	3/24/17	Complete Genome	Oregon State University	SAMN02189838	GCA_000590755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/755/GCA_000590755.1_ASM59075v1	23842467	J/31-98
Lactobacillus reuteri	1598	PRJNA376205	376205	Terrabacteria group	Firmicutes	2.14857	38.4	-	MWIJ01	75	2098	1967	5/22/17	5/24/17	Scaffold	Cornell University	SAMN06364940	GCA_002156605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/605/GCA_002156605.1_ASM215660v1	-	LR0
Chlamydia trachomatis RC-F/69	907263	PRJNA53845	53845	PVC group	Chlamydiae	1.04609	41.3	chromosome:NC_021895.1/CP002671.1	-	1	969	898	7/26/13	3/24/17	Complete Genome	Oregon State University	SAMN02603697	GCA_000441585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/585/GCA_000441585.1_ASM44158v1	23786423	RC-F/69
Chlamydia trachomatis RC-L2(s)/46	907264	PRJNA53847	53847	PVC group	Chlamydiae	1.03882	41.3	chromosome:NC_021887.1/CP002672.1	-	1	967	896	7/26/13	3/24/17	Complete Genome	Oregon State University	SAMN02603698	GCA_000441615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/615/GCA_000441615.1_ASM44161v1	23786423	RC-L2(s)/46
Chlamydia trachomatis RC-J/943	907266	PRJNA53851	53851	PVC group	Chlamydiae	1.0388	41.3	chromosome:NC_021896.1/CP002674.1	-	1	965	895	7/26/13	3/24/17	Complete Genome	Oregon State University	SAMN02603700	GCA_000441655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/655/GCA_000441655.1_ASM44165v1	23786423	RC-J/943
Chlamydia trachomatis RC-J/953	907267	PRJNA53853	53853	PVC group	Chlamydiae	1.03879	41.3	chromosome:NC_021889.1/CP002675.1	-	1	966	898	7/26/13	3/24/17	Complete Genome	Oregon State University	SAMN02603701	GCA_000441675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/675/GCA_000441675.1_ASM44167v1	23786423	RC-J/953
Chlamydia trachomatis RC-L2(s)/3	907268	PRJNA53855	53855	PVC group	Chlamydiae	1.04617	41.3	chromosome:NC_021897.1/CP002676.1	-	1	971	896	7/26/13	3/24/17	Complete Genome	Oregon State University	SAMN02603702	GCA_000441695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/695/GCA_000441695.1_ASM44169v1	23786423	RC-L2(s)/3
Chlamydia trachomatis RC-J/966	907271	PRJNA53861	53861	PVC group	Chlamydiae	1.03884	41.3	chromosome:NC_021898.1/CP002679.1	-	1	966	897	7/26/13	3/24/17	Complete Genome	Oregon State University	SAMN02603705	GCA_000441755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/755/GCA_000441755.1_ASM44175v1	23786423	RC-J/966
Chlamydia trachomatis RC-J/971	1007871	PRJNA66011	66011	PVC group	Chlamydiae	1.03844	41.3	chromosome:NC_021899.1/CP002681.1	-	1	966	898	7/26/13	3/24/17	Complete Genome	Oregon State University	SAMN02603707	GCA_000441795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/795/GCA_000441795.1_ASM44179v1	23786423	RC-J/971
Chlamydia trachomatis RC-L2/55	1007870	PRJNA66013	66013	PVC group	Chlamydiae	1.03887	41.3	chromosome:NC_021893.1/CP002682.1	-	1	965	896	7/26/13	3/24/17	Complete Genome	Oregon State University	SAMN02603708	GCA_000441815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/815/GCA_000441815.1_ASM44181v1	23786423	RC-L2/55
Corynebacterium jeikeium	38289	PRJNA238244	238244	Terrabacteria group	Actinobacteria	2.38581	61.6	-	JFCL01	41	2139	1995	8/6/14	4/2/17	Contig	University of Washington	SAMN02641062	GCA_000738335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/335/GCA_000738335.1_Cj47453	25116839	Cj47453
Candidatus Pelagibacter ubique	198252	PRJEB9287	287342	Proteobacteria	Alphaproteobacteria	1.01042	28.8	-	CVSF01	68	1095	1037	6/17/15	4/10/17	Contig	UNIVERSITY OF CALIFORNIA - SAN DIEGO	SAMEA3368557	GCA_001179925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/925/GCA_001179925.1_CLC_assembled_contigs	-	SCGC AAA795-D22
Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1	1295009	PRJNA189659	189659	Euryarchaeota	Thermoplasmata	1.93165	41.3	chromosome:NC_021353.1/CP005934.1	-	1	1900	1815	6/3/13	4/8/17	Complete Genome	Universite d'Auvergne	SAMN03081468	GCA_000404225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/225/GCA_000404225.1_ASM40422v1	23846268	Issoire-Mx1
Clostridioides difficile QCD-63q42	479831	PRJNA21103	21103	Terrabacteria group	Firmicutes	4.44374	28.6575	chromosome:NZ_CM000637.1/CM000637.1	ABHD02	28	4213	4038	11/5/07	5/18/17	Chromosome	McGill University	SAMN02470541	GCA_000154625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/625/GCA_000154625.1_ASM15462v1	-	-
Shigella boydii 09-0344	1212577	PRJNA171084	171084	Proteobacteria	Gammaproteobacteria	4.82121	51	-	AMKE01	174	5453	4318	1/6/15	8/4/17	Contig	Institute for Genome Sciences	SAMN03276477	GCA_000815785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/785/GCA_000815785.1_ASM81578v1	-	09-0344
Streptococcus salivarius PS4	1157946	PRJNA87019	87019	Terrabacteria group	Firmicutes	2.05153	39.8	-	AJFW01	56	1950	1785	4/4/12	3/30/17	Contig	Era7 Bioinformatics	SAMN02471358	GCA_000257585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/585/GCA_000257585.1_ASM25758v1	22843595	PS4
Streptococcus suis TL13	1276647	PRJNA171404	171404	Terrabacteria group	Firmicutes	2.03815	41.3	chromosome:NC_021213.1/CP003993.1	-	1	2054	1873	5/13/13	3/15/17	Complete Genome	China animal health and epidemiology center	SAMN02603120	GCA_000390245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/245/GCA_000390245.1_ASM39024v1	23814033	TL13
Melioribacter roseus P3M-2	1191523	PRJNA165865	165865	FCB group	Bacteroidetes/Chlorobi group	3.30041	41.3	chromosome:NC_018178.1/CP003557.1	-	1	2950	2871	7/18/12	4/7/17	Complete Genome	Centre Bioengineering RAS	SAMN02603097	GCA_000279145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/145/GCA_000279145.1_ASM27914v1	"2,330,101,923,297,860"	P3M-2
Providencia stuartii MRSN 2154	1157951	PRJNA88059	88059	Proteobacteria	Gammaproteobacteria	4.40211	41.3	chromosome:NC_017731.1/CP003488.1	-	1	4173	3849	4/18/12	3/30/17	Complete Genome	Walter Reed Army Institute of Research	SAMN02604304	GCA_000259175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/175/GCA_000259175.1_ASM25917v1	22740665	MRSN 2154
Chlamydia trachomatis E/SW3	1071759	PRJEA71079	71079	PVC group	Chlamydiae	1.0429	41.3	chromosome I:NC_017952.1/HE601801.1	-	1	966	901	3/13/12	3/23/17	Complete Genome	Sanger Institute	SAMEA2272525	GCA_000304495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/495/GCA_000304495.1_Cm_ESW3	22406642	E/SW3
Leptospira borgpetersenii str. UI 09149	1049782	PRJNA74109	74109	Spirochaetes	Spirochaetia	3.88866	40.1	-	AHNN02	27	3733	3426	1/24/12	3/31/17	Contig	J. Craig Venter Institute	SAMN02436500	GCA_000244215.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/215/GCA_000244215.3_LborgUI09149v2.0	-	UI 09149
Bartonella bacilliformis CAR600-02	1293907	PRJNA189516	189516	Proteobacteria	Alphaproteobacteria	1.41744	38.2	-	ASIZ01	4	1254	1147	6/17/14	4/2/17	Scaffold	Broad Institute	SAMN01921140	GCA_000709875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/875/GCA_000709875.1_Bart_baci_CAR600-02_V1	-	CAR600-02
Chlamydia trachomatis F/SW4	1071762	PRJEA71085	71085	PVC group	Chlamydiae	1.04274	41.3	chromosome I:NC_017951.1/HE601804.1	-	1	966	900	3/13/12	3/24/17	Complete Genome	Sanger Institute	SAMEA2272343	GCA_000304515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/515/GCA_000304515.1_Cm_FSW4	22406642	F/SW4
Campylobacter fetus subsp. venerealis B6	1167638	PRJNA156699	156699	Proteobacteria	delta/epsilon subdivisions	1.94514	33.2	-	AJMC01	80	1982	1881	8/27/14	4/2/17	Scaffold	"Centre for Comparative Genomics, Murdoch University"	SAMN03009825	GCA_000744035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/035/GCA_000744035.1_CfvVB6_v1.0	25278524	B6
Chlamydia trachomatis F/SW5	1071763	PRJEA71087	71087	PVC group	Chlamydiae	1.04274	41.3	chromosome I:NC_017953.1/HE601805.1	-	1	965	902	3/13/12	3/23/17	Complete Genome	Sanger Institute	SAMEA2272682	GCA_000304535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/535/GCA_000304535.1_Cm_FSW5	22406642	F/SW5
Oenococcus oeni AWRIB202	1160703	PRJNA89141	89141	Terrabacteria group	Firmicutes	1.84076	37.9	-	AJTO01	36	1889	1751	11/1/12	3/23/17	Contig	The Australian Wine Research Institute	SAMN02471119	GCA_000309425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/425/GCA_000309425.1_AWRIB202_v1	22863143	AWRIB202
Streptococcus mitis bv. 2 str. F0392	768726	PRJNA49439	49439	Terrabacteria group	Firmicutes	1.917	41.2	-	AFUO01	2	1932	1798	7/21/11	3/30/17	Contig	J. Craig Venter Institute	SAMN02415617	GCA_000221165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/165/GCA_000221165.2_ASM22116v2	-	F0392
Aeromonas salmonicida subsp. salmonicida 01-B526	1076135	PRJNA71855	71855	Proteobacteria	Gammaproteobacteria	4.92793	58.3	-	AGVO01	604	4580	4179	11/10/11	5/18/17	Contig	"IBIS, Université Laval"	SAMN02469939	GCA_000234845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/845/GCA_000234845.2_ASM23484v2	22247525	01-B526
Chlamydia trachomatis L1/440/LN	1071769	PRJEA71099	71099	PVC group	Chlamydiae	1.03926	41.3	chromosome:NC_020937.1/HE601950.1	-	1	965	894	3/13/12	3/23/17	Complete Genome	Sanger Institute	SAMEA2272273	GCA_000318825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/825/GCA_000318825.1_ASM31882v1	22406642	L1/440/LN
Chlamydia trachomatis L2/25667R	1071772	PRJEA71105	71105	PVC group	Chlamydiae	1.03884	41.3	chromosome:NC_020930.1/HE601954.1	-	1	965	895	3/13/12	3/23/17	Complete Genome	Sanger Institute	SAMEA767949	GCA_000318885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/885/GCA_000318885.1_ASM31888v1	22406642	L2/25667R
Coxiella burnetii Cb185	1354676	PRJEB4272	214680	Proteobacteria	Gammaproteobacteria	1.99537	42.6	-	CBTH01	1	2180	1832	9/12/13	4/2/17	Scaffold	URMITE	SAMEA2271988	GCA_000470495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/495/GCA_000470495.1_Cb185	-	Cb185
Lactobacillus casei	1582	PRJNA263696	263696	Terrabacteria group	Firmicutes	2.84878	46.6	-	JXNV01	89	2993	2723	1/21/15	4/3/17	Scaffold	Beijing University of Agriculture	SAMN03105784	GCA_000827145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/827/145/GCA_000827145.1_ASM82714v1	-	KL1-Liu
Salinispora arenicola CNY260	1169177	PRJNA175180	175180	Terrabacteria group	Actinobacteria	5.77577	69.5	-	ARHG01	63	5247	4965	4/19/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441356	GCA_000375185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/185/GCA_000375185.1_ASM37518v1	-	CNY260
Lactobacillus helveticus CIRM-BIA 951	1226334	PRJEB1541	200917	Terrabacteria group	Firmicutes	1.9024	36.7	-	CBUK01	159	2018	1638	10/23/13	4/2/17	Scaffold	INRA STLO	SAMEA2272613	GCA_000493455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/455/GCA_000493455.1_LhCIRMBIA951V1	-	CIRM-BIA 951
Geobacillus stearothermophilus	1422	PRJNA305084	305084	Terrabacteria group	Firmicutes	3.30145	52.1	-	LQIE01	190	3350	3255	4/13/16	4/13/16	Contig	Griffith University	SAMN04378115	GCA_001620045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/045/GCA_001620045.1_ASM162004v1	-	C1BS50MT1
Vibrio harveyi	669	PRJNA272351	272351	Proteobacteria	Gammaproteobacteria	5.90646	45	-	JXIM01	132	5393	5168	2/9/15	4/3/17	Contig	University of Malaya	SAMN03280972	GCA_000834095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/095/GCA_000834095.1_ASM83409v1	-	BSW7
Bifidobacterium adolescentis	1680	PRJNA379831	379831	Terrabacteria group	Actinobacteria	2.15085	59.4	-	NAQF01	11	1803	1678	3/31/17	4/6/17	Contig	University of Parma	SAMN06621712	GCA_002075965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/965/GCA_002075965.1_Bbif1892B	-	1892B
Lactococcus garvieae Tac2	1229518	PRJNA174284	174284	Terrabacteria group	Firmicutes	2.24286	38.2	-	AMFE01	97	2221	2108	10/17/12	3/30/17	Contig	"Department of Food, Environmental and Nutritional Sciences, University of Milano"	SAMN02471886	GCA_000305995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/995/GCA_000305995.1_LgarvTac2_1.0	23405320	Tac2
Sulfolobus islandicus M.16.40	1132503	PRJNA80901	80901	TACK group	Crenarchaeota	2.66478	35	chromosome:NZ_AHJQ01000001.1/AHJQ01000001.1	AHJQ01	1	2931	2595	1/25/12	3/30/17	Chromosome	University of Illinois	SAMN02471808	GCA_000245215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/215/GCA_000245215.2_ASM24521v2	22363207	M.16.40
Orientia tsutsugamushi str. Sido	1359174	PRJNA212490	212490	Proteobacteria	Alphaproteobacteria	0.712858	30.3	-	LAOM01	83	928	917	3/27/15	3/27/15	Contig	IGS	SAMN02699164	GCA_000965065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/065/GCA_000965065.1_ASM96506v1	-	Sido
Lactobacillus fermentum 28-3-CHN	575599	PRJNA38517	38517	Terrabacteria group	Firmicutes	2.02652	52	-	ACQG01	42	1954	1817	10/1/09	3/30/17	Scaffold	Broad Institute	SAMN02463745	GCA_000162395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/395/GCA_000162395.1_ASM16239v1	-	28-3-CHN
Chlamydia trachomatis A2497	580047	PRJEA32651	32651	PVC group	Chlamydiae	1.04432	41.3	chromosome:NC_016798.1/FM872306.1	-	1	976	905	1/10/12	3/23/17	Complete Genome	Wellcome Trust Sanger Institute	SAMEA2272430	GCA_000284475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/475/GCA_000284475.1_ASM28447v1	-	A2497
Porphyromonas gingivalis W4087	1321823	PRJNA198893	198893	FCB group	Bacteroidetes/Chlorobi group	2.2166	48.5	-	AWVE01	114	1971	1825	9/16/13	4/1/17	Scaffold	Washington University	SAMN02436749	GCA_000467995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/995/GCA_000467995.1_ASM46799v1	-	W4087
Ureaplasma urealyticum 4155	1161916	PRJNA89459	89459	Terrabacteria group	Tenericutes	0.858138	25.7	-	AJFZ01	17	703	637	3/20/12	3/30/17	Contig	The J. Craig Venter Institute	SAMN02436579	GCA_000255415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/415/GCA_000255415.2_Uurealyticum4155v1.0	-	4155
Mycoplasma mycoides subsp. capri PG3	1188246	PRJNA164791	164791	Terrabacteria group	Tenericutes	1.02453	23.6	-	JFAE01	28	886	784	3/12/14	4/2/17	Contig	EVOLMYCO	SAMN02952980	GCA_000590435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/435/GCA_000590435.1_Version_1.0	-	PG3
Aliivibrio fischeri	668	PRJNA311605	311605	Proteobacteria	Gammaproteobacteria	4.11868	38.2	-	LTZE01	33	3717	3615	5/9/16	4/5/17	Contig	MIT	SAMN04520027	GCA_001640525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/525/GCA_001640525.1_ASM164052v1	27128997	MB15A5
Streptococcus suis D12	1004952	PRJNA65469	65469	Terrabacteria group	Firmicutes	2.18306	41.3	chromosome:NC_017621.1/CP002644.1	-	1	2207	2001	10/25/11	3/15/17	Complete Genome	Huazhong Agricultural University	SAMN02603322	GCA_000231905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/905/GCA_000231905.1_ASM23190v1	22026465	D12
Chlamydia trachomatis L2c	887712	PRJNA47581	47581	PVC group	Chlamydiae	1.03831	41.3	chromosome:NC_015744.1/CP002024.1	-	1	966	895	7/6/11	3/22/17	Complete Genome	Emory University	SAMN00011086	GCA_000220105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/105/GCA_000220105.1_ASM22010v1	21540364	L2c
Burkholderia multivorans	87883	PRJNA239704	239704	Proteobacteria	Betaproteobacteria	6.466	67.4	-	JFHQ01	26	6114	5843	12/26/14	4/2/17	Contig	Instituto Superior Tecnico	SAMN02666821	GCA_000807815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/815/GCA_000807815.1_D2214.1	25676757	D2214
Borrelia burgdorferi WI91-23	498737	PRJNA28627	28627	Spirochaetes	Spirochaetia	1.42791	28.2929	plasmid WI91-23_cp26:NC_012151.1/CP001446.1; plasmid WI91-23_cp32-1:NC_012148.1/CP001445.1; plasmid WI91-23_cp32-10:NC_012159.1/CP001449.1; plasmid WI91-23_cp32-11:NC_012150.1/CP001451.1; plasmid WI91-23_cp32-4:NC_012162.1/CP001444.1; plasmid WI91-23_cp32-5:NC_012153.1/CP001453.1; plasmid WI91-23_cp32-6:NC_012160.1/CP001450.1; plasmid WI91-23_cp32-7:NC_012161.1/CP001457.1; plasmid WI91-23_cp9-3:NC_012155.1/CP001460.1; plasmid WI91-23_lp17:NC_012188.1/CP001461.1; plasmid WI91-23_lp25:NC_012178.1/CP001459.1; plasmid WI91-23_lp28-1:NC_012197.1/CP001456.1; plasmid WI91-23_lp28-3:NC_012171.1/CP001452.1; plasmid WI91-23_lp28-4:NC_012187.1/CP001454.1; plasmid WI91-23_lp28-6:NC_012195.1/CP001455.1; plasmid WI91-23_lp36:NC_012189.1/CP001448.1; plasmid WI91-23_lp38:NC_012167.1/CP001458.1; plasmid WI91-23_lp5:NC_012192.1/CP001462.1; plasmid WI91-23_lp54:NC_012175.1/CP001447.1; plasmid WI91-23_lp56:NC_012198.1/CP001443.1	ABJW02	54	1480	1304	2/6/08	3/30/17	Scaffold	J. Craig Venter Institute	SAMN02436285	GCA_000181855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/181/855/GCA_000181855.2_ASM18185v2	-	WI91-23
Treponema pallidum subsp. pallidum	161	PRJNA271237	271237	Spirochaetes	Spirochaetia	1.13947	52.8	chromosome:NZ_CP010558.1/CP010558.1	-	1	1068	1005	6/3/16	4/5/17	Chromosome	University of Washington	SAMN03273363	GCA_001655235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/235/GCA_001655235.1_ASM165523v1	-	Chicago Population
Rhizobium leguminosarum bv. trifolii WSM2297	754762	PRJNA62551	62551	Proteobacteria	Alphaproteobacteria	7.99946	61	-	AJUK01	4	7802	7359	6/5/12	7/9/17	Scaffold	DOE Joint Genome Institute	SAMN02256543	GCA_000271845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/845/GCA_000271845.1_ASM27184v1	-	WSM2297
Rickettsia prowazekii str. GvF12	1290429	PRJNA188531	188531	Proteobacteria	Alphaproteobacteria	1.10926	29	-	APMN01	10	1006	973	4/29/13	7/5/13	Contig	Naval Medical Research Center	SAMN01983877	GCA_000385475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/475/GCA_000385475.1_P_2008_04_01_09_56_31_runAssembly	23814035	GvF12
Clavibacter michiganensis subsp. michiganensis	33013	PRJNA331204	331204	Terrabacteria group	Actinobacteria	3.28149	72.7	-	MDHM01	1	3083	2706	5/19/17	8/4/17	Contig	University of California	SAMN05439591	GCA_002150985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/985/GCA_002150985.1_ASM215098v1	-	CA00002
Brucella canis UK10/02	1198696	PRJNA176536	176536	Proteobacteria	Alphaproteobacteria	3.30776	57.3	-	AQNB01	2	3349	3141	4/16/13	4/1/17	Contig	Broad Institute	SAMN01047747	GCA_000366825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/825/GCA_000366825.1_Bruc_cani_UK10_02_V1	-	UK10/02
Streptococcus suis ST3	1007064	PRJNA65245	65245	Terrabacteria group	Firmicutes	2.02881	41.3	chromosome:NC_015433.1/CP002633.1	-	1	2052	1865	4/19/11	3/15/17	Complete Genome	Huazhong Agricultural University	SAMN02603319	GCA_000204625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/625/GCA_000204625.1_ASM20462v1	21572001	ST3
Chlamydia trachomatis G/9301	718219	PRJNA45851	45851	PVC group	Chlamydiae	1.04281	41.3	chromosome:NC_017432.1/CP001930.1	-	1	967	901	5/28/10	3/22/17	Complete Genome	Oregon State University	SAMN02603696	GCA_000092805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/805/GCA_000092805.1_ASM9280v1	-	G/9301
Bradyrhizobium japonicum USDA 123	936135	PRJNA195748	195748	Proteobacteria	Alphaproteobacteria	10.4577	63.3	-	AXVP01	517	10272	9181	10/25/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02441447	GCA_000482525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/525/GCA_000482525.1_ASM48252v1	-	USDA 123
Microcystis aeruginosa PCC 9806	1160282	PRJEA88177	88177	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.26256	43.1	-	CAIL01	93	4258	3839	5/28/12	3/31/17	Scaffold	Genoscope CEA	SAMEA2272205	GCA_000312725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/725/GCA_000312725.1_ASM31272v1	-	PCC 9806
Methanobrevibacter smithii TS94A	911126	PRJNA59669	59669	Euryarchaeota	Methanobacteria	1.88938	30.3	-	AELU01	47	1801	1677	2/17/11	3/30/17	Contig	Washington University in St.Louis	SAMN02436680	GCA_000189995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/995/GCA_000189995.2_ASM18999v2	21317366	TS94A
Streptococcus dysgalactiae subsp. equisimilis	119602	PRJNA279308	279308	Terrabacteria group	Firmicutes	2.03871	39.3	-	LAKT01	58	2017	1892	4/8/15	4/3/17	Contig	MD Anderson	SAMN03445739	GCA_000971005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/005/GCA_000971005.1_ASM97100v1	26430051	UT-SS957
Borrelia garinii IPT134	1408854	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.24232	27.9	-	AYBD01	111	1262	745	12/3/13	4/2/17	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378821	GCA_000501235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/235/GCA_000501235.1_BorGarIPT134	-	IPT134
Streptococcus mutans TCI-120	1074118	PRJNA71987	71987	Terrabacteria group	Firmicutes	1.7769	37	-	AGKK01	159	1801	1675	10/6/11	3/22/17	Contig	JCVI	SAMN02436599	GCA_000228845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/845/GCA_000228845.2_SMUT4-NEX_7-120	-	TCI-120
Chlamydia trachomatis E/150	707184	PRJNA43143	43143	PVC group	Chlamydiae	1.043	41.3	chromosome:NC_017439.1/CP001886.1	-	1	967	901	5/21/10	3/22/17	Complete Genome	Oregon State University	SAMN02603692	GCA_000092665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/665/GCA_000092665.1_ASM9266v1	20308297	E/150
Chlamydia trachomatis G/9768	707185	PRJNA43145	43145	PVC group	Chlamydiae	1.04281	41.3	chromosome:NC_017429.1/CP001887.1	-	1	967	901	5/21/10	3/22/17	Complete Genome	Oregon State University	SAMN02603693	GCA_000092685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/685/GCA_000092685.1_ASM9268v1	20308297	G/9768
Chlamydia trachomatis G/11222	707186	PRJNA43147	43147	PVC group	Chlamydiae	1.04235	41.3	chromosome:NC_017430.1/CP001888.1	-	1	966	903	5/21/10	3/22/17	Complete Genome	Oregon State University	SAMN02603694	GCA_000092705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/705/GCA_000092705.1_ASM9270v1	20308297	G/11222
Chlamydia trachomatis G/11074	707187	PRJNA43149	43149	PVC group	Chlamydiae	1.04287	41.3	chromosome:NC_017440.1/CP001889.1	-	1	967	901	5/21/10	3/22/17	Complete Genome	Oregon State University	SAMN02603695	GCA_000092725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/725/GCA_000092725.1_ASM9272v1	20308297	G/11074
Chlamydia trachomatis E/11023	707183	PRJNA43141	43141	PVC group	Chlamydiae	1.04303	41.3	chromosome:NC_017431.1/CP001890.1	-	1	965	902	5/21/10	3/22/17	Complete Genome	Oregon State University	SAMN02603691	GCA_000092745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/745/GCA_000092745.1_ASM9274v1	20308297	E/11023
Stenotrophomonas maltophilia EPM1	1190567	PRJNA165731	165731	Proteobacteria	Gammaproteobacteria	4.78777	66.4	chromosome:NZ_CM001824.1/CM001824.1	AMXM01	1	8843	8637	3/1/13	5/19/17	Chromosome	Università degli Studi di Milano	SAMN02471395	GCA_000344215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/215/GCA_000344215.1_EPM1_1.0	23599297	EPM1
Comamonas testosteroni	285	PRJNA217891	217891	Proteobacteria	Betaproteobacteria	5.32575	61.2	-	AWOV01	93	4834	4663	10/1/14	4/2/17	Contig	Huazhong Agricultural University	SAMN02768804	GCA_000761315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/315/GCA_000761315.1_CJC13v1	-	JC13
Bacillus mycoides	1405	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.76334	35.1	-	MUAH01	90	5861	5550	3/3/17	3/6/17	Contig	Cornell University	SAMN06242083	GCA_002014505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/505/GCA_002014505.1_ASM201450v1	-	FSL M7-0109
Yersinia frederiksenii	29484	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.68401	46.8	-	CQBW01	26	4357	4190	3/23/15	4/3/17	Scaffold	SC	SAMEA859937	GCA_001147045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/045/GCA_001147045.1_4821_5_5	-	FCF224
Yersinia kristensenii	28152	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.46418	47.3	-	CWJK01	56	4141	3910	7/8/15	4/4/17	Scaffold	SC	SAMEA859918	GCA_001244605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/605/GCA_001244605.1_5139_2_4	-	OK6311
Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456	500634	PRJNA237576	237576	Terrabacteria group	Actinobacteria	2.20279	62.7	-	JDUM01	50	1884	1721	11/4/14	4/2/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442030	GCA_000771485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/485/GCA_000771485.1_DSM-20456	25658111	DSM 20456
Alteromonas macleodii	28108	PRJNA338983	338983	Proteobacteria	Gammaproteobacteria	5.24312	44.6	-	MIPY01	76	4708	4549	9/30/16	4/5/17	Contig	US Naval Research Lab	SAMN05578454	GCA_001750365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/365/GCA_001750365.1_ASM175036v1	-	KCP01
Micrococcus luteus	1270	PRJNA375758	375758	Terrabacteria group	Actinobacteria	2.41011	73	-	NCWR01	93	2212	2075	8/29/17	8/30/17	Contig	SysMilk	SAMN06718478	GCA_002276745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/745/GCA_002276745.1_ASM227674v1	-	OG2
Streptococcus equi subsp. zooepidemicus Sz35	1381086	PRJNA214018	214018	Terrabacteria group	Firmicutes	2.03758	41.6	-	JAUB01	130	1949	1812	2/17/15	3/25/17	Contig	Copenhagen University	SAMN02298719	GCA_000876365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/365/GCA_000876365.1_ASM87636v1	-	Sz35
Helicobacter pullorum	35818	PRJNA326722	326722	Proteobacteria	delta/epsilon subdivisions	1.71748	34.5	-	MAOZ01	105	1681	1580	8/4/16	4/5/17	Contig	University of Hyderabad	SAMN05291446	GCA_001698785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/785/GCA_001698785.1_ASM169878v1	-	NAP10B8
Haemophilus parasuis H465	1275970	PRJNA184683	184683	Proteobacteria	Gammaproteobacteria	1.49851	39.9	-	APBY01	94	1515	1286	8/7/13	4/1/17	Contig	Iowa State University	SAMN02470069	GCA_000444645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/645/GCA_000444645.1_ASM44464v1	24051319	H465
Chlamydia trachomatis Sweden2	634464	PRJEA43167	43167	PVC group	Chlamydiae	1.04284	41.3	chromosome:NC_017441.1/FN652779.2	-	1	967	903	2/24/10	3/22/17	Complete Genome	Wellcome Trust Sanger Institute	SAMEA2271937	GCA_000210495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/495/GCA_000210495.1_ASM21049v1	20093289	Sweden2
Neorickettsia risticii str. Illinois	434131	PRJNA19099	19099	Proteobacteria	Alphaproteobacteria	0.879977	41.3	chromosome:NC_013009.1/CP001431.1	-	1	815	766	7/23/09	4/7/17	Complete Genome	The Ohio State University	SAMN02603947	GCA_000022525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/525/GCA_000022525.1_ASM2252v1	19661282	Illinois
Streptococcus suis P1/7	218494	PRJNA352	352	Terrabacteria group	Firmicutes	2.00749	41.3	chromosome:NC_012925.1/AM946016.1	-	1	2021	1900	7/7/09	3/15/17	Complete Genome	Sanger Institute	SAMEA3138299	GCA_000091905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/091/905/GCA_000091905.1_ASM9190v1	19603075	P1/7
Vibrio splendidus	29497	PRJNA322707	322707	Proteobacteria	Gammaproteobacteria	5.37398	44.1	-	LZGA01	43	4790	4553	6/23/16	4/5/17	Contig	UC Davis	SAMN05172618	GCA_001676015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/015/GCA_001676015.1_A52015	-	UCD-FRSSP16_15
Chlamydia trachomatis B/TZ1A828/OT	672161	PRJEA32653	32653	PVC group	Chlamydiae	1.04428	41.3	chromosome:NC_012687.1/FM872307.1	-	1	974	905	5/11/09	3/22/17	Complete Genome	Wellcome Trust Sanger Institute	SAMEA2272143	GCA_000026905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/905/GCA_000026905.1_ASM2690v1	19460133	B/TZ1A828/OT
Enterococcus casseliflavus	37734	PRJEB16044	348486	Terrabacteria group	Firmicutes	3.5645	42.6	-	FNFS01	44	3445	3291	10/20/16	4/5/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216513	GCA_900101195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/195/GCA_900101195.1_IMG-taxon_2651870318_annotated_assembly	-	NLAE-zl-C414
Bacillus megaterium	1404	PRJNA309473	309473	Terrabacteria group	Firmicutes	5.4353	38.2	-	LRPG01	167	5592	5348	1/27/16	4/4/17	Contig	PharmaSea	SAMN04432436	GCA_001541965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/965/GCA_001541965.1_ASM154196v1	27056214	PE5-112
Clostridium sporogenes	1509	PRJNA278445	278445	Terrabacteria group	Firmicutes	4.16343	27.9	-	LLZV01	59	3989	3746	11/17/15	4/4/17	Contig	Illinois Institute of Technology	SAMN03418526	GCA_001444575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/575/GCA_001444575.1_ASM144457v1	26519392	-
Chlamydia trachomatis B/Jali20/OT	580049	PRJEA32655	32655	PVC group	Chlamydiae	1.04435	41.3	chromosome:NC_012686.1/FM872308.1	-	1	970	895	5/11/09	3/22/17	Complete Genome	Wellcome Trust Sanger Institute	SAMEA2272641	GCA_000026925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/925/GCA_000026925.1_ASM2692v1	19460133	Jali20
Bacteroides ovatus	28116	PRJNA283619	283619	FCB group	Bacteroidetes/Chlorobi group	6.97484	41.8	-	LRDP01	193	5422	5184	1/25/16	4/4/17	Scaffold	Brigham & Women's Hospital	SAMN03653578	GCA_001535615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/615/GCA_001535615.1_ASM153561v1	26768901	CL09T03C03
Bacteroides uniformis	820	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	4.88323	46.5	-	CZAF01	20	4200	4040	10/1/15	4/4/17	Contig	SC	SAMEA3545313	GCA_001406135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/135/GCA_001406135.1_13470_2_66	-	2789STDY5834847
Treponema denticola US-Trep	999440	PRJNA64933	64933	Spirochaetes	Spirochaetia	2.76573	38	-	AGEB01	2	2654	2510	2/15/13	4/1/17	Scaffold	Broad Institute	SAMN02596727	GCA_000340745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/745/GCA_000340745.1_Trep_dent_US-Trep_V1	-	US-Trep
Bordetella bronchiseptica MO211	1331239	PRJNA202151	202151	Proteobacteria	Betaproteobacteria	5.0534	68.2	-	JHOJ01	140	4830	4663	4/29/14	4/2/17	Contig	JCVI	SAMN02231425	GCA_000649185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/185/GCA_000649185.1_gbb43v01	25908122	MO211
Streptococcus equi subsp. equi 4047	553482	PRJEA30765	30765	Terrabacteria group	Firmicutes	2.25379	41.3	chromosome:NC_012471.1/FM204883.1	-	1	2175	1914	3/26/09	3/22/17	Complete Genome	The Wellcome Trust Sanger Institute	SAMEA2272426	GCA_000026585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/585/GCA_000026585.1_ASM2658v1	19325880	4047
Mesorhizobium loti	381	PRJNA325577	325577	Proteobacteria	Alphaproteobacteria	6.50891	62.9	-	LZTK01	15	6380	6133	6/20/16	4/5/17	Contig	Curtin University	SAMN05241054	GCA_001671545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/671/545/GCA_001671545.1_ASM167154v1	-	R7ANS::ICEMcbSym1271
Chlamydia trachomatis 434/Bu	471472	PRJNA28583	28583	PVC group	Chlamydiae	1.03884	41.3	chromosome:NC_010287.1/AM884176.1	-	1	937	880	1/15/08	8/3/16	Complete Genome	Wellcome Trust Sanger Institute	SAMEA1705923	GCA_000068585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/068/585/GCA_000068585.1_ASM6858v1	18032721	434/Bu
Chlamydia trachomatis L2b/UCH-1/proctitis	471473	PRJNA28585	28585	PVC group	Chlamydiae	1.03886	41.3	chromosome:NC_010280.2/AM884177.2	-	1	966	895	1/15/08	3/22/17	Complete Genome	Welcome Trust Sanger Institute	SAMEA1705954	GCA_000068525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/068/525/GCA_000068525.2_ASM6852v2	18032721	UCH-1
Streptococcus gordonii	1302	PRJNA280654	280654	Terrabacteria group	Firmicutes	2.1645	40.5	-	LAVZ01	50	2077	1986	3/11/16	4/5/17	Contig	University of Malaya	SAMN03480626	GCA_001588775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/775/GCA_001588775.1_ASM158877v1	-	Blackburn
Ruminococcus albus	1264	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.03052	43.9	-	DGVU01	248	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452400	GCA_002395985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/985/GCA_002395985.1_ASM239598v1	28894102	-
Bacillus pumilus SAFR-032	315750	PRJNA20391	20391	Terrabacteria group	Firmicutes	3.70464	41.3	chromosome:NC_009848.4/CP000813.4	-	1	3786	3611	9/26/07	4/5/17	Complete Genome	Baylor College of Medicine	SAMN00253833	GCA_000017885.4	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/885/GCA_000017885.4_ASM1788v4	"178,959,692,379,906,000,000,000"	SAFR-032
Actinobacillus pleuropneumoniae serovar 5b str. L20	416269	PRJNA18221	18221	Proteobacteria	Gammaproteobacteria	2.27448	41.3	chromosome:NC_009053.1/CP000569.1	-	1	2171	2030	2/23/07	3/30/17	Complete Genome	National Research Council of Canada	SAMN02603665	GCA_000015885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/885/GCA_000015885.1_ASM1588v1	18065534	L20
Lactobacillus gasseri	1596	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.79614	34.9	-	JVOU01	33	1728	1656	7/10/15	4/3/17	Contig	University of Washington	SAMN03197430	GCA_001063045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/045/GCA_001063045.1_ASM106304v1	26230489	240_LCRI
Lactobacillus sakei subsp. sakei 23K	314315	PRJNA13435	13435	Terrabacteria group	Firmicutes	1.88466	41.3	chromosome:NC_007576.1/CR936503.1	-	1	1897	1771	10/21/05	4/10/17	Complete Genome	Institut National de la Recherche Agronomique (INRA)	SAMEA3138223	GCA_000026065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/065/GCA_000026065.1_ASM2606v1	-	23K
Chlamydia muridarum	83560	PRJNA244651	244651	PVC group	Chlamydiae	1.08045	40.3	-	JNOP01	2	961	909	6/10/14	4/2/17	Contig	IGS	SAMN02808329	GCA_000700905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/905/GCA_000700905.1_cmvar004	24961692	Var004
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.12969	41.5	-	JJPU01	211	3558	3314	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708985	GCA_000979035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/035/GCA_000979035.1_gtlEnvA5udCFS	25756680	3.H.M.1B.1
Anaplasma phagocytophilum str. CRT53-1	1359157	PRJNA212465	212465	Proteobacteria	Alphaproteobacteria	1.5709	41.8	-	LAOD01	45	1275	1090	3/27/15	4/3/17	Contig	IGS	SAMN02666087	GCA_000964915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/915/GCA_000964915.1_ASM96491v1	-	CRT53-1
Leuconostoc mesenteroides subsp. cremoris ATCC 19254	586220	PRJNA34629	34629	Terrabacteria group	Firmicutes	1.73507	38.5	-	ACKV01	29	1701	1473	4/22/09	3/30/17	Scaffold	Baylor College of Medicine	SAMN00139187	GCA_000160595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/595/GCA_000160595.1_ASM16059v1	-	ATCC 19254
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.1584	39.9	-	FPLV01	4	1056	958	5/10/17	5/24/17	Contig	WTSI	SAMEA1094347	GCA_900118675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/675/GCA_900118675.1_7067_6_44	-	C15_98
Bacteroides thetaiotaomicron	818	PRJEB16826	350982	FCB group	Bacteroidetes/Chlorobi group	6.22715	43	-	FOAL01	38	4951	4737	10/29/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910322	GCA_900109385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/385/GCA_900109385.1_IMG-taxon_2593339226_annotated_assembly	-	KPPR-3
Streptococcus uberis C5388	1450188	PRJNA234018	234018	Terrabacteria group	Firmicutes	1.8378	36.5	-	JATF01	12	1858	1774	4/22/15	4/3/17	Contig	University of Nottingham	SAMN02570396	GCA_000975505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/975/505/GCA_000975505.1_ASM97550v1	25898893	C5388
Bartonella quintana JK 39	1134501	PRJNA81675	81675	Proteobacteria	Alphaproteobacteria	1.56596	38.8	-	AHPB01	3	1364	1197	6/12/14	4/10/17	Scaffold	Broad Institute	SAMN00778951	GCA_000708985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/985/GCA_000708985.1_Bart_quin_JK39_V1	-	JK 39
Lactobacillus acidophilus CFH	1421011	PRJNA227335	227335	Terrabacteria group	Firmicutes	1.971	34.6	-	AYUB01	124	1965	1837	11/20/13	4/2/17	Contig	Los Alamos National Laboratory	SAMN02401339	GCA_000497795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/795/GCA_000497795.1_50cell_lacAci39final	-	CFH
Bartonella henselae	38323	PRJNA295147	295147	Proteobacteria	Alphaproteobacteria	1.85528	38	-	LNZY01	71	1684	1471	1/4/17	4/10/17	Contig	Anses UMR BIPAR	SAMN04286620	GCA_001932085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/085/GCA_001932085.1_ASM193208v1	-	A74
Chlamydia trachomatis D/UW-3/CX	272561	PRJNA45	45	PVC group	Chlamydiae	1.04252	41.3	chromosome:NC_000117.1/AE001273.1	-	1	935	887	5/20/98	8/3/16	Complete Genome	ChGP	SAMN02603114	GCA_000008725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/725/GCA_000008725.1_ASM872v1	9784136	D/UW-3/CX
Paenibacillus sp. IHBB 10380	1566358	PRJNA275272	275272	Terrabacteria group	Firmicutes	5.7873	41.2938	chromosome:NZ_CP010976.1/CP010976.1; plasmid unnamed:NZ_CP010977.1/CP010977.1	-	2	5313	5000	3/9/15	4/10/17	Complete Genome	CSIR-Institute of Himalayan Bioresource Technology	SAMN03342438	GCA_000949425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/425/GCA_000949425.1_ASM94942v1	25908145	IHBB 10380
Chlamydia trachomatis L3/404/LN	1071783	PRJEA71127	71127	PVC group	Chlamydiae	1.04667	41.2646	chromosome:NC_020974.1/HE601955.1; plasmid pL3404:NC_020957.1/HE603228.1	-	2	973	900	3/13/12	3/23/17	Complete Genome	Sanger Institute	SAMEA2272107	GCA_000319105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/105/GCA_000319105.1_ASM31910v1	22406642	L3/404/LN
Lactobacillus brevis	1580	PRJNA264952	264952	Terrabacteria group	Firmicutes	2.52032	46	-	JXUE01	46	2447	2327	2/6/15	4/3/17	Scaffold	Technische Universitaet Muenchen	SAMN03144670	GCA_000833415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/415/GCA_000833415.1_ASM83341v1	-	TMW 1.6
Mycoplasma gallisepticum ATCC 19610	1267002	PRJNA183043	183043	Terrabacteria group	Tenericutes	0.920684	31.4	-	AUAI01	32	781	671	7/15/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441218	GCA_000428645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/645/GCA_000428645.1_ASM42864v1	-	ATCC 19610
Chlamydia trachomatis	813	PRJNA234355	234355	PVC group	Chlamydiae	1.0495	41.2644	chromosome:NZ_CP010571.1/CP010571.1; plasmid unnamed:NZ_CP010572.1/CP010572.1	-	2	973	912	7/21/15	3/26/17	Complete Genome	"National Institute of Health, Portugal"	SAMN03290798	GCA_001183845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/845/GCA_001183845.1_ASM118384v1	26207372	Ia/CS190/96
Chlamydia trachomatis D/CS637/11	1447714	PRJNA234355	234355	PVC group	Chlamydiae	1.05017	41.2643	chromosome:NZ_CP007131.1/CP007131.1; plasmid unnamed:NZ_CP007132.1/CP007132.1	-	2	975	914	7/21/15	3/26/17	Complete Genome	"National Institute of Health, Portugal"	SAMN03890858	GCA_001183765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/765/GCA_001183765.1_ASM118376v1	-	D/CS637/11
Chromobacterium violaceum	536	PRJNA387362	387362	Proteobacteria	Betaproteobacteria	4.81697	64.9	-	NHOO01	67	4514	4355	6/8/17	6/10/17	Contig	University of Neuchatel	SAMN07150491	GCA_002179535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/535/GCA_002179535.1_ASM217953v1	-	GHPS1
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.8094	67.3	-	LOWI01	77	6186	5926	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449229	GCA_001523785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/785/GCA_001523785.1_ASM152378v1	-	FL-2-2-30-S1-D0
Chlamydia trachomatis A/363	1071753	PRJEA71065	71065	PVC group	Chlamydiae	1.05153	41.2643	chromosome:NC_020966.1/HE601796.2; plasmid pA363:NC_019272.1/HE603209.2	-	2	984	913	3/13/12	3/23/17	Complete Genome	Sanger Institute	SAMEA2272666	GCA_000318525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/525/GCA_000318525.2_ASM31852v2	22406642	A/363
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.48862	32.8	-	CUES01	25	2478	2347	3/31/15	3/26/17	Contig	SC	SAMEA1035081	GCA_001223985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/985/GCA_001223985.1_7067_4_82	-	278-10
Brucella ovis IntaBari-2006-46-348	1293921	PRJNA189533	189533	Proteobacteria	Alphaproteobacteria	3.2895	57.2	-	AQIG01	38	3423	3002	4/16/13	4/1/17	Contig	Broad Institute	SAMN01921154	GCA_000366065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/065/GCA_000366065.1_Bruc_ovis_IntaBari-2006-46-348_V1	-	IntaBari-2006-46-348
Mycoplasma bovis	28903	PRJNA306895	306895	Terrabacteria group	Tenericutes	0.950746	29.3	-	LQDA01	73	820	736	1/4/17	4/6/17	Contig	"University of California, Davis"	SAMN04366496	GCA_001929945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/945/GCA_001929945.1_ASM192994v1	-	2133MB
Proteus mirabilis WGLW4	1125693	PRJNA169467	169467	Proteobacteria	Gammaproteobacteria	3.96048	38.8	-	AMGU01	2	3610	3451	9/17/12	3/30/17	Scaffold	Broad Institute	SAMN02463960	GCA_000297835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/835/GCA_000297835.1_Prot_mira_WGLW4_V1	-	WGLW4
Chlamydia trachomatis A/7249	1071755	PRJEA71069	71069	PVC group	Chlamydiae	1.05188	41.2643	chromosome:NC_020944.1/HE601797.1; plasmid pA7249:NC_020979.1/HE603211.1	-	2	983	911	3/13/12	3/23/17	Complete Genome	Sanger Institute	SAMEA2272774	GCA_000318565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/565/GCA_000318565.1_ASM31856v1	22406642	A/7249
Cronobacter sakazakii	28141	PRJNA251802	251802	Proteobacteria	Gammaproteobacteria	4.66782	56.7	-	JOLK01	107	4549	4300	10/9/15	4/4/17	Scaffold	"Nottingham Trent University, UK"	SAMN02840769	GCA_001309095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/095/GCA_001309095.1_ASM130909v1	26438044	699
Klebsiella oxytoca G54	1409787	PRJNA223655	223655	Proteobacteria	Gammaproteobacteria	5.79959	55.2	-	JHPN01	10	5454	5241	3/28/14	2/21/17	Scaffold	Broad Institute	SAMN02381110	GCA_000607265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/265/GCA_000607265.1_Kleb_oxyt_G54_V1	-	G54
Erwinia amylovora Ea644	1255309	PRJEB606	196602	Proteobacteria	Gammaproteobacteria	3.83232	53.2775	plasmid pEA29:NC_020921.1/HF560648.1	CAPD01	41	3646	3291	4/8/13	4/10/17	Contig	CeBiTec	SAMEA2272119	GCA_000367665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/665/GCA_000367665.2_ASM36766v2	-	Ea644
Clostridium beijerinckii	1520	PRJNA322811	322811	Terrabacteria group	Firmicutes	6.15666	29.6	-	LZZJ01	305	5484	5176	2/23/17	2/25/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05170532	GCA_002006325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/325/GCA_002006325.1_ASM200632v1	-	NRRL B-593
Streptomyces scabiei	1930	PRJNA293375	293375	Terrabacteria group	Actinobacteria	10.2991	71	-	MVNV01	1401	9380	8133	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06346025	GCA_002155725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/725/GCA_002155725.1_ASM215572v1	-	NRRL B-2801
Lactobacillus salivarius GJ-24	1041521	PRJNA67679	67679	Terrabacteria group	Firmicutes	1.99597	33	-	AFOI01	11	1971	1806	6/9/11	3/30/17	Contig	"Chung-Ang University, Korea"	SAMN02470918	GCA_000217735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/735/GCA_000217735.2_ASM21773v2	21742893	GJ-24
Bacillus clausii	79880	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.25013	44.6	-	NPCG01	93	4208	4098	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372708	GCA_002272505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/505/GCA_002272505.1_assembly-7543_v1	-	7543
Gluconobacter oxydans	442	PRJNA288385	288385	Proteobacteria	Alphaproteobacteria	3.64045	60.5	-	LHZB01	121	3475	3255	3/7/16	4/5/17	Scaffold	Ghent University	SAMN03799272	GCA_001580675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/675/GCA_001580675.1_ASM158067v1	-	LMG 1764
Bacteroides vulgatus	821	PRJNA327106	327106	FCB group	Bacteroidetes/Chlorobi group	5.7053	42.5	-	MKXP01	153	-	-	12/22/16	12/22/16	Scaffold	None	SAMN05509315	GCA_001913895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/895/GCA_001913895.1_ASM191389v1	-	-
Agrobacterium vitis	373	PRJNA381929	381929	Proteobacteria	Alphaproteobacteria	5.9836	57.5	-	NBZE01	66	5439	5220	6/8/17	6/10/17	Scaffold	Oregon State University	SAMN06693614	GCA_002179845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/845/GCA_002179845.1_ASM217984v1	28569126	V80/94
Moraxella catarrhalis 101P30B1	857572	PRJNA49925	49925	Proteobacteria	Gammaproteobacteria	1.86609	41.7	-	AEPC01	26	1748	1633	3/22/11	3/30/17	Contig	Center for Genomic Sciences	SAMN02393793	GCA_000193065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/065/GCA_000193065.2_ASM19306v2	21269504	101P30B1
Chlamydia trachomatis Ia/SotonIa1	1071766	PRJEA71093	71093	PVC group	Chlamydiae	1.05013	41.2643	chromosome:NC_020970.1/HE601808.1; plasmid pSotonIa1:NC_020962.1/HE603236.1	-	2	973	910	3/13/12	3/23/17	Complete Genome	Sanger Institute	SAMEA2272296	GCA_000318765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/765/GCA_000318765.1_ASM31876v1	22406642	Ia/SotonIa1
Bifidobacterium breve HPH0326	1203540	PRJNA169434	169434	Terrabacteria group	Actinobacteria	2.50431	59.1	-	ATCB01	4	2226	2047	6/14/13	4/1/17	Scaffold	Broad Institute	SAMN02596976	GCA_000411435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/435/GCA_000411435.1_Bifi_brev_HPH0326_V1	-	HPH0326
Parabacteroides distasonis	823	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	5.07348	44.9	-	CZBM01	45	4337	4118	10/1/15	6/12/17	Contig	SC	SAMEA3545411	GCA_001406015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/015/GCA_001406015.1_14207_7_71	-	2789STDY5834948
Photobacterium angustum	661	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.85813	39.5	-	JZSY01	58	4404	3833	3/10/15	4/3/17	Contig	FDA/CFSAN	SAMN03295471	GCA_000950375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/375/GCA_000950375.1_CFSAN029423_01.0	25931609	GCSL-A2-3
Bacillus weihenstephanensis	86662	PRJNA318335	318335	Terrabacteria group	Firmicutes	5.59713	35.2	-	LXLP01	137	5895	5480	10/12/16	4/5/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04819581	GCA_001757935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/935/GCA_001757935.1_ASM175793v1	-	GOE4
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.22196	36.7	-	LPRF01	9	2331	2224	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305139	GCA_001559985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/985/GCA_001559985.1_GG12_C01_04	-	GG12-C01-04
Streptococcus sanguinis SK408	888818	PRJNA53177	53177	Terrabacteria group	Firmicutes	2.39857	42.8	-	AFBE01	6	2403	2286	4/4/11	3/30/17	Scaffold	Baylor College of Medicine	SAMN00253319	GCA_000195045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/045/GCA_000195045.1_ASM19504v1	-	SK408
Staphylococcus saprophyticus	29385	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.64424	33	-	LNPH01	42	2576	2430	9/28/16	4/5/17	Contig	Tufts University	SAMN04244263	GCA_001747655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/655/GCA_001747655.1_ASM174765v1	-	BC4
Vibrio sp. J2-3	1507971	PRJEB5887	284693	Proteobacteria	Gammaproteobacteria	5.51203	44.6	-	CCKM01	52	4818	4719	5/20/15	4/10/17	Scaffold	STATION BIOLOGIQUE DE ROSCOFF	SAMEA2593986	GCA_001243545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/545/GCA_001243545.1_VRSK3v1_PRJEB5887	-	J2-3
Bacillus coagulans DSM 1 = ATCC 7050	1121088	PRJNA185217	185217	Terrabacteria group	Firmicutes	2.94782	47.3	-	ATUM01	170	3101	2817	7/9/13	4/1/17	Contig	DOE Joint Genome Institute	SAMN02440918	GCA_000420205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/205/GCA_000420205.1_ASM42020v1	-	ATCC 7050
Paenibacillus polymyxa	1406	PRJNA274878	274878	Terrabacteria group	Firmicutes	5.6798	45.6	-	JYCW01	45	4969	4790	3/18/15	4/3/17	Scaffold	Research Center for Eco-Environmental Sciences	SAMN03333220	GCA_000955925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/955/925/GCA_000955925.1_ASM95592v1	25953158	EBL06
Yersinia intermedia	631	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.85426	47.8	-	CTKY01	114	4544	4296	3/26/15	4/3/17	Scaffold	SC	SAMEA859863	GCA_001221165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/165/GCA_001221165.1_4821_7_8	-	93/02
Pseudomonas stutzeri	316	PRJNA273703	273703	Proteobacteria	Gammaproteobacteria	4.59718	64.2	-	JXTL01	35	4377	4240	3/13/15	4/3/17	Scaffold	Volcani Research Center	SAMN03295272	GCA_000952205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/205/GCA_000952205.1_ASM95220v1	-	NT0124
Chlamydia trachomatis Ia/SotonIa3	1071767	PRJEA71095	71095	PVC group	Chlamydiae	1.05028	41.2643	chromosome:NC_020940.1/HE601809.1; plasmid pSotonIa3:NC_020989.1/HE603237.1	-	2	974	911	3/13/12	3/23/17	Complete Genome	Sanger Institute	SAMEA2272048	GCA_000318785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/785/GCA_000318785.1_ASM31878v1	22406642	Ia/SotonIa3
Propionibacterium freudenreichii	1744	PRJEB6443	270207	Terrabacteria group	Actinobacteria	2.52163	67.4	-	CDAD01	51	2220	2100	3/21/15	4/4/17	Scaffold	INRA STLO	SAMEA2826824	GCA_001369035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/369/035/GCA_001369035.1_CIRM-BIA_514	-	CIRM-BIA 514
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.13766	67.2	-	LOTE01	83	7350	6985	1/21/16	6/27/17	Contig	Northern Arizona University	SAMN03449139	GCA_001522155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/155/GCA_001522155.1_ASM152215v1	-	RF23-BP19
Campylobacter concisus	199	PRJNA273422	273422	Proteobacteria	delta/epsilon subdivisions	1.84486	37.6	-	LVLC01	34	1878	1793	4/13/17	4/17/17	Contig	RMIT University	SAMN04577765	GCA_002092855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/855/GCA_002092855.1_ASM209285v1	-	RMIT-O17
Finegoldia magna	1260	PRJNA383659	383659	Terrabacteria group	Firmicutes	1.80768	32.1	-	NDYH01	44	1731	1637	8/7/17	8/9/17	Contig	Aarhus University	SAMN06769903	GCA_002243155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/155/GCA_002243155.1_ASM224315v1	-	09T408
Lysinibacillus sphaericus	1421	PRJNA253097	253097	Terrabacteria group	Firmicutes	4.63285	37.1	-	JPDK01	166	4565	4375	7/25/14	4/2/17	Scaffold	"Wuhan Institute of Virology, Chinese Academy of Sciences"	SAMN02867358	GCA_000733525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/525/GCA_000733525.1_ASM73352v1	-	SSII-1
Flavobacterium psychrophilum	96345	PRJNA256259	256259	FCB group	Bacteroidetes/Chlorobi group	2.8055	32.6	chromosome:NZ_CP010278.2/CP010278.2	-	1	2503	2392	4/13/15	4/10/17	Chromosome	University of Copenhagen	SAMN02941918	GCA_000971735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/735/GCA_000971735.2_ASM97173v2	-	3
Clostridium butyricum	1492	PRJNA271049	271049	Terrabacteria group	Firmicutes	4.60476	28.6	-	JXBT01	2	4147	3958	2/19/15	4/3/17	Contig	Inner Mongolia Agricultural University	SAMN03272540	GCA_000878275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/275/GCA_000878275.1_ASM87827v1	-	HM-68
Akkermansia muciniphila	239935	PRJEB21068	396410	PVC group	Verrucomicrobia	2.85916	55.9	-	FXYA01	215	2511	2417	7/29/17	8/7/17	Scaffold	"WAGENINGEN UNIVERSITY, LABORATORY OF SYSTEMS AND SYNTHETIC BIOLOGY."	SAMEA104102608	GCA_900184965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/184/965/GCA_900184965.1_Mouse_2_MG.fasta	-	-
Rhodococcus erythropolis	1833	PRJNA348829	348829	Terrabacteria group	Actinobacteria	6.54951	62.4	-	MLKO01	38	6064	5659	10/21/16	4/17/17	Contig	Hasselt University	SAMN05915915	GCA_001831305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/305/GCA_001831305.1_ASM183130v1	28232452	VSD3
Lactobacillus johnsonii	33959	PRJNA376205	376205	Terrabacteria group	Firmicutes	1.89861	34.4	-	MWIK01	49	1819	1704	5/22/17	5/24/17	Contig	Cornell University	SAMN06364931	GCA_002156645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/645/GCA_002156645.1_ASM215664v1	-	LJ0
Lactobacillus sakei	1599	PRJNA343164	343164	Terrabacteria group	Firmicutes	1.94089	41	-	MKDC01	44	1961	1872	2/1/17	4/10/17	Contig	ETH Zurich	SAMN05717725	GCA_001981705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/705/GCA_001981705.1_ASM198170v1	-	RI-394
Arcobacter butzleri JV22	888827	PRJNA53195	53195	Proteobacteria	delta/epsilon subdivisions	2.30273	26.3	-	AEPT01	22	2428	2381	12/27/10	9/17/13	Scaffold	Baylor College of Medicine	SAMN00210774	GCA_000185325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/325/GCA_000185325.1_ASM18532v1	-	JV22
Xanthomonas albilineans	29447	PRJNA270037	270037	Proteobacteria	Gammaproteobacteria	3.58204	63.1	-	JZIJ01	6	3039	2784	3/25/15	4/3/17	Contig	CIRAD	SAMN03262645	GCA_000963145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/145/GCA_000963145.1_Xal-USA048-G1	-	USA048
Mycobacterium intracellulare	1767	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.65561	67.9	-	NSFC01	24	5336	5199	9/12/17	9/14/17	Contig	University of Michigan Medical School	SAMN07528790	GCA_002292525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/525/GCA_002292525.1_ASM229252v1	-	FLAC0204
Escherichia albertii	208962	PRJDB3047	301492	Proteobacteria	Gammaproteobacteria	4.72645	49.7	-	BBVI01	63	4837	4512	11/6/15	2/25/17	Scaffold	University of Miyazaki	SAMD00026643	GCA_001514645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/645/GCA_001514645.1_ASM151464v1	26537224	NIAH_Bird_13
Caldicellulosiruptor bescii	31899	PRJEB20918	389543	Terrabacteria group	Firmicutes	2.92764	35.2	-	FXXC01	3	2826	2612	6/9/17	6/21/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216240	GCA_900184135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/184/135/GCA_900184135.1_IMG-taxon_2663762790_annotated_assembly	-	MACB1020
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.76139	47.6	-	MDZN01	65	3515	3363	11/17/16	4/5/17	Contig	The University of Queensland	SAMN04320389	GCA_001880475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/475/GCA_001880475.1_ASM188047v1	-	89/3717-10
Streptococcus equinus	1335	PRJEB16585	349875	Terrabacteria group	Firmicutes	1.90998	37.7	-	FNMW01	13	1869	1807	10/22/16	4/5/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216415	GCA_900106895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/895/GCA_900106895.1_IMG-taxon_2654588136_annotated_assembly	-	Sb17
Variovorax paradoxus	34073	PRJNA294421	294421	Proteobacteria	Betaproteobacteria	9.62607	69.2	-	LKTU01	197	8933	8646	10/19/15	4/11/17	Contig	US EPA	SAMN04146763	GCA_001401735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/735/GCA_001401735.1_ASM140173v1	-	H061
Pectobacterium carotovorum subsp. brasiliense	180957	PRJNA259701	259701	Proteobacteria	Gammaproteobacteria	4.83153	52.1	-	JQOE01	109	4343	4163	9/15/14	4/2/17	Contig	Food and Environment Research Agency	SAMN03010639	GCA_000754695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/695/GCA_000754695.1_ASM75469v1	-	LMG 21371
Mycobacterium kansasii	1768	PRJNA248353	248353	Terrabacteria group	Actinobacteria	6.57255	66.1	-	JNDJ01	204	5843	5507	6/27/14	4/2/17	Contig	ChunLab Inc.	SAMN02798027	GCA_000715375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/375/GCA_000715375.1_ASM71537v1	-	SMC1
Brachyspira hyodysenteriae	159	PRJNA272555	272555	Spirochaetes	Spirochaetia	3.05618	27	-	JXNF01	94	2688	2570	5/26/15	4/3/17	Scaffold	Murdoch University	SAMN03285447	GCA_001013005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/013/005/GCA_001013005.1_ASM101300v1	26098837	B78
Lactobacillus crispatus	47770	PRJNA290636	290636	Terrabacteria group	Firmicutes	2.20146	36.6	-	LJGP01	91	2184	1995	1/26/16	4/4/17	Contig	Vaginal Microbiome Consortium	SAMN03893601	GCA_001541385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/385/GCA_001541385.1_ASM154138v1	26747455	VMC3
Aggregatibacter actinomycetemcomitans serotype e str. SC936	1440769	PRJNA232406	232406	Proteobacteria	Gammaproteobacteria	2.1647	44.5	-	AZTP01	90	2186	1980	3/23/16	4/5/17	Contig	"Bumgarner laboratory, Department of Microbiology, University of Washington"	SAMN04573014	GCA_001596235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/235/GCA_001596235.1_SC936v1.0	-	SC936
Rothia mucilaginosa	43675	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.37432	59.3	-	JVEI01	35	1877	1786	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197702	GCA_001063545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/545/GCA_001063545.1_ASM106354v1	26230489	509_RMUC
Streptomyces albus subsp. albus	67257	PRJNA238534	238534	Terrabacteria group	Actinobacteria	6.84328	73.3	-	JNZJ01	4562	-	-	7/2/14	7/2/14	Contig	University of Illinois	SAMN02645338	GCA_000718405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/405/GCA_000718405.2_ASM71840v2	-	NRRL B-2238
Streptococcus intermedius	1338	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.96889	37.8	-	JUZI01	19	1942	1790	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197832	GCA_001073635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/635/GCA_001073635.1_ASM107363v1	26230489	631_SCON
Lactobacillus jensenii DSM 20557	1423762	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.61063	34.3	-	AYYU01	99	1494	1415	11/6/15	4/4/17	Scaffold	Shanghai Majorbio	SAMN02369404	GCA_001436455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/455/GCA_001436455.1_ASM143645v1	26415554	DSM 20557
Lactobacillus ruminis	1623	PRJNA357347	357347	Terrabacteria group	Firmicutes	2.02022	43.4	-	MRYQ01	49	2084	1863	3/31/17	4/26/17	Contig	Helsinki University	SAMN06140972	GCA_002076375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/375/GCA_002076375.1_ASM207637v1	28414739	PEL66
Gardnerella vaginalis JCP8070	1261065	PRJNA181320	181320	Terrabacteria group	Actinobacteria	1.47925	42.2	-	ATJK01	138	1293	1105	6/25/13	4/1/17	Scaffold	Washington University	SAMN02436911	GCA_000414545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/545/GCA_000414545.1_ASM41454v1	-	JCP8070
Bifidobacterium pseudocatenulatum	28026	PRJDB4597	325619	Terrabacteria group	Actinobacteria	2.45334	56.7	-	BCYD01	66	2123	1945	6/10/16	4/5/17	Contig	Yakult Central Institute	SAMD00047614	GCA_001686065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/065/GCA_001686065.1_ASM168606v1	27340092	CA-K29b
Lactobacillus paracasei subsp. paracasei Lpp122	1256218	PRJNA178447	178447	Terrabacteria group	Firmicutes	2.92076	46.5	-	ANKW01	201	3105	2820	6/11/13	4/1/17	Contig	Danone Research	SAMN02469705	GCA_000409855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/855/GCA_000409855.1_Lpp122.v.1	23894338	Lpp122
Staphylococcus hominis	1290	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.16179	31.4	-	JUQI01	124	2086	2034	7/10/15	4/3/17	Contig	University of Washington	SAMN03198066	GCA_001074645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/645/GCA_001074645.1_ASM107464v1	26230489	858_SHAE
Staphylococcus capitis	29388	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.52573	32.8	-	JUXJ01	167	2420	2330	7/10/15	4/3/17	Contig	University of Washington	SAMN03197883	GCA_001073915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/915/GCA_001073915.1_ASM107391v1	26230489	680_SEPI
Staphylococcus warneri	1292	PRJNA278191	278191	Terrabacteria group	Firmicutes	2.56387	32.5	-	LDTR01	87	2498	2367	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401355	GCA_001476975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/975/GCA_001476975.1_ASM147697v1	26793183	NS346
Acinetobacter radioresistens	40216	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.98754	41.6	-	DBPL01	68	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06456897	GCA_002304865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/865/GCA_002304865.1_ASM230486v1	28894102	-
Rhodococcus hoagii	43767	PRJNA316970	316970	Terrabacteria group	Actinobacteria	5.21701	68.7	-	LWTQ01	44	4869	4745	4/17/17	6/6/17	Contig	The University of Edinburgh	SAMN04874668	GCA_002094225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/225/GCA_002094225.1_ASM209422v1	27638249	PAM2274
Lactobacillus iners UPII 143-D	928327	PRJNA60373	60373	Terrabacteria group	Firmicutes	1.25758	32.6	-	AEXJ01	21	1221	1138	3/7/11	3/30/17	Contig	J. Craig Venter Institute	SAMN00138211	GCA_000191685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/685/GCA_000191685.2_ASM19168v1	-	UPII 143-D
Bacillus atrophaeus 1013-2	723889	PRJNA46209	46209	Terrabacteria group	Firmicutes	4.05265	43.1	-	AEFT01	28	4102	3933	4/19/11	3/30/17	Contig	Transformational Medical Technologies Program	SAMN01816417	GCA_000204805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/805/GCA_000204805.2_ASM20480v2	21464989	1013-2
Klebsiella variicola	244366	PRJNA234108	234108	Proteobacteria	Gammaproteobacteria	5.52122	57.2	-	JMZD01	5	5471	5214	5/19/14	7/24/17	Scaffold	Broad Institute	SAMN02581241	GCA_000694595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/595/GCA_000694595.1_Kleb_pneu_MGH_68_V1	-	MGH 68
Ruminococcus flavefaciens	1265	PRJEB18412	355826	Terrabacteria group	Firmicutes	3.67879	43.3	-	FRCT01	33	3268	3109	12/2/16	4/6/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487860	GCA_900143025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/025/GCA_900143025.1_IMG-taxon_2623620473_annotated_assembly	-	Y1
Acinetobacter nosocomialis	106654	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	4.04101	38.6	-	BBTJ01	65	3884	3695	2/17/15	4/3/17	Contig	National Institute of Technology and Evaluation	SAMD00019888	GCA_000931675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/675/GCA_000931675.1_ASM93167v1	-	GTC 03313
Streptomyces griseus subsp. rhodochrous	285575	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.02996	72.6	-	JOFD01	85	7063	6756	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645255	GCA_000721205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/205/GCA_000721205.1_ASM72120v1	-	NRRL B-2930
Streptococcus oralis	1303	PRJNA304333	304333	Terrabacteria group	Firmicutes	2.01757	41	-	LQRP01	20	1971	1841	3/2/16	4/5/17	Scaffold	University of Kaiserslautern	SAMN04325061	GCA_001579095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/095/GCA_001579095.1_ASM157909v1	27303717	DD30
Achromobacter xylosoxidans	85698	PRJNA285410	285410	Proteobacteria	Betaproteobacteria	6.50664	67.8	-	LDVL01	688	6218	5723	8/31/15	4/4/17	Contig	University of Queensland	SAMN03753630	GCA_001275875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/875/GCA_001275875.1_ASM127587v1	-	A10
Xanthomonas fuscans subsp. fuscans	366649	PRJNA264815	264815	Proteobacteria	Gammaproteobacteria	5.18014	64.7	-	JSEY02	168	4719	4114	11/10/14	4/3/17	Contig	University of Exeter	SAMN03142815	GCA_000786935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/935/GCA_000786935.2_NCPPB1058v2	26500625	NCPPB 1058
Pseudomonas syringae pv. antirrhini	251702	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	6.13205	58.7	-	LJPT01	189	5808	5423	10/20/15	4/4/17	Scaffold	University of Toronto	SAMN03976298	GCA_001401395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/395/GCA_001401395.1_PatICMP4303	-	ICMP4303
Pseudomonas savastanoi pv. savastanoi	360920	PRJNA274668	274668	Proteobacteria	Gammaproteobacteria	6.07177	58	-	JYHF01	247	5793	5263	3/2/15	4/3/17	Contig	INRA	SAMN03328984	GCA_000935695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/695/GCA_000935695.1_PSAVPseNe107-G1	25931602	PseNe107
Acinetobacter calcoaceticus TG19588	1221294	PRJNA172705	172705	Proteobacteria	Gammaproteobacteria	3.90277	38.6	-	AMIX01	31	3779	3635	10/2/12	3/30/17	Contig	Translational Genomics Research Institute	SAMN02471237	GCA_000309015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/015/GCA_000309015.1_ASM30901v1	-	TG19588
Acinetobacter junii	40215	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.00737	38.5	-	DCXB01	62	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451726	GCA_002328335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/328/335/GCA_002328335.1_ASM232833v1	28894102	-
Pseudoalteromonas sp. BSi20439	420915	PRJDA74509	74509	Proteobacteria	Gammaproteobacteria	3.8828	40.2	-	BADW01	243	3569	3311	10/26/11	4/17/17	Contig	Shandong University	SAMD00036592	GCA_000241165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/165/GCA_000241165.2_PspBSi20439_1.0	22275105	BSi20439
Acinetobacter lwoffii	28090	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.03312	43.3	-	DCLL01	63	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451418	GCA_002321025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/025/GCA_002321025.1_ASM232102v1	28894102	-
Vibrio alginolyticus 12G01	314288	PRJNA13571	13571	Proteobacteria	Gammaproteobacteria	5.25738	44.6	-	AAPS01	20	4769	4546	4/6/06	5/19/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436162	GCA_000153505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/505/GCA_000153505.1_ASM15350v1	-	12G01
Pediococcus acidilactici	1254	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.92852	42.1	-	JQAQ01	18	1864	1789	11/6/15	4/4/17	Contig	Shanghai Majorbio	SAMN02797809	GCA_001436795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/795/GCA_001436795.1_ASM143679v1	26415554	AS1.2696
Chlamydia trachomatis D-EC	759363	PRJNA48087	48087	PVC group	Chlamydiae	1.05001	41.2643	chromosome:NC_017434.1/CP002052.1; plasmid pCTDEC1:NC_017435.1/CP002053.1	-	2	974	912	6/9/10	3/22/17	Complete Genome	"Integrated Genomics, Inc."	SAMN00744935	GCA_000092485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/485/GCA_000092485.1_ASM9248v1	20547745	D-EC
Vibrio coralliilyticus	190893	PRJNA399049	399049	Proteobacteria	Gammaproteobacteria	5.95294	45.3	-	NRQO01	65	5617	5460	9/7/17	9/18/17	Contig	Oregon State University	SAMN07540309	GCA_002287625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/625/GCA_002287625.1_ASM228762v1	-	AIC-7
Enterobacter asburiae	61645	PRJNA271006	271006	Proteobacteria	Gammaproteobacteria	4.90705	55.6	-	JZKP01	167	4915	4558	3/30/15	4/3/17	Contig	JCVI	SAMN03277192	GCA_000965825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/825/GCA_000965825.1_ASM96582v1	-	CIDEIMsCOL5
Brucella sp. F96/2	437671	PRJNA173528	173528	Proteobacteria	Alphaproteobacteria	3.36108	57.2	-	AQKU01	7	3437	3181	4/16/13	4/17/17	Scaffold	Broad Institute	SAMN00839725	GCA_000371025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/025/GCA_000371025.1_Bruc_sp_F96_2_V1	-	F96/2
Pseudomonas amygdali pv. myricae	129139	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.95376	58.2	-	LJQV01	403	5684	5113	10/20/15	4/4/17	Scaffold	University of Toronto	SAMN03976272	GCA_001400555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/555/GCA_001400555.1_PmyICMP7118	-	ICMP7118
Xanthomonas euvesicatoria	456327	PRJNA275509	275509	Proteobacteria	Gammaproteobacteria	5.36264	64.5	-	JZRX01	146	4855	4422	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03349346	GCA_001009255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/255/GCA_001009255.1_ASM100925v1	-	L3-2
Acinetobacter pittii	48296	PRJNA255268	255268	Proteobacteria	Gammaproteobacteria	4.37218	38.7	-	JQNT01	127	4241	4003	12/9/14	4/2/17	Contig	The University of Queensland	SAMN03003652	GCA_000800555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/555/GCA_000800555.1_APCR12-42	25428154	CR12-42
Bacillus cytotoxicus	580165	PRJEB14962	336312	Terrabacteria group	Firmicutes	4.20129	35.6	-	FMJN01	59	4413	4006	9/10/16	5/31/17	Scaffold	INRA-MIG	SAMEA4361357	GCA_900094915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/915/GCA_900094915.1_ASM90009491v1	-	NVH_883-00
Riemerella anatipestifer	34085	PRJNA279101	279101	FCB group	Bacteroidetes/Chlorobi group	2.18797	35.1	-	LAVB01	16	2063	1970	8/7/15	4/3/17	Contig	Hubei Academy of Agricultural Sciences	SAMN03437034	GCA_001263145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/145/GCA_001263145.1_ASM126314v1	26404587	RA-JLLY
Staphylococcus lugdunensis	28035	PRJNA382358	382358	Terrabacteria group	Firmicutes	2.57089	33.7953	chromosome:NZ_CP020764.1/CP020764.1; plasmid pVISLISI_1:NZ_CP020765.1/CP020765.1	-	2	2459	2353	4/18/17	5/1/17	Chromosome	EA7290	SAMN06704732	GCA_002097035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/035/GCA_002097035.1_ASM209703v1	-	VISLISI_22
Streptococcus anginosus SK52 = DSM 20563	1000570	PRJDB75	219075	Terrabacteria group	Firmicutes	1.90064	38.6	-	BAST01	24	1866	1737	9/7/13	4/2/17	Contig	"Pediatric Dentistry, Tokyo Dental College"	SAMD00036758	GCA_000474055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/055/GCA_000474055.1_ASM47405v1	-	SK52
Pantoea ananatis	553	PRJNA275554	275554	Proteobacteria	Gammaproteobacteria	4.76505	55.2	-	JYGW01	33	4516	4151	3/13/15	8/8/17	Contig	Thompson Rivers University	SAMN03349711	GCA_000952095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/095/GCA_000952095.1_ASM95209v1	26950324	GB1
Chlamydia trachomatis D-LC	759364	PRJNA48089	48089	PVC group	Chlamydiae	1.05001	41.2643	chromosome:NC_017436.1/CP002054.1; plasmid pCTDLC1:NC_017433.1/CP002055.1	-	2	974	912	6/9/10	3/22/17	Complete Genome	"Integrated Genomics, Inc."	SAMN00014120	GCA_000093005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/093/005/GCA_000093005.1_ASM9300v1	20547745	D-LC
Lysinibacillus fusiformis	28031	PRJNA348753	348753	Terrabacteria group	Firmicutes	4.61872	37.4	-	DFQN01	18	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452297	GCA_002377785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/785/GCA_002377785.1_ASM237778v1	28894102	-
Streptococcus gallolyticus subsp. gallolyticus	53354	PRJNA327032	327032	Terrabacteria group	Firmicutes	2.331	37.5	-	MAMV01	22	2335	2231	8/10/16	4/5/17	Scaffold	Alliance de Recherche sur les Maladies Infectieuses Nantes-Angers	SAMN05300497	GCA_001703415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/703/415/GCA_001703415.1_ASM170341v1	-	NTS31301958
Leptospira santarosai str. ZUN179	1049985	PRJNA74171	74171	Spirochaetes	Spirochaetia	4.07258	41.7	-	AHOQ02	55	4136	3811	1/24/12	4/1/17	Contig	J. Craig Venter Institute	SAMN02436422	GCA_000244795.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/795/GCA_000244795.3_gls454187v02	-	ZUN179
Citrobacter freundii MGH 56	1439318	PRJNA234255	234255	Proteobacteria	Gammaproteobacteria	5.82909	51.8	-	JMUJ01	18	5629	5324	5/19/14	4/10/17	Scaffold	Broad Institute	SAMN02581388	GCA_000692115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/115/GCA_000692115.1_Citr_freu_MGH_56_V1	-	MGH 56
[Clostridium] clostridioforme	1531	PRJNA289613	289613	Terrabacteria group	Firmicutes	7.15746	48.1	-	NHTR01	16	7067	6121	7/19/17	8/4/17	Contig	Max von Pettenkofer-Institut	SAMN03856235	GCA_002221545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/545/GCA_002221545.1_ASM222154v1	-	YL32
Fusobacterium necrophorum subsp. funduliforme	143387	PRJNA315619	315619	Fusobacteria	Fusobacteriia	1.98146	35.2	-	LVDY01	38	1871	1777	3/23/16	4/5/17	Contig	Aarhus University	SAMN04566684	GCA_001596495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/495/GCA_001596495.1_ASM159649v1	-	LS_1197
Streptococcus parasanguinis	1318	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.18548	41.6	-	JUPI01	158	2143	2046	7/10/15	4/3/17	Contig	University of Washington	SAMN03198092	GCA_001074805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/805/GCA_001074805.1_ASM107480v1	26230489	886_SPAR
Agrobacterium sp. C13	439366	PRJNA205092	205092	Proteobacteria	Alphaproteobacteria	5.64327	59.8	-	ASYD01	61	5422	5127	1/22/16	4/16/17	Contig	Huazhong Agricultural University	SAMN04395160	GCA_001526545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/545/GCA_001526545.1_ASM152654v1	-	C13
Haemophilus parainfluenzae	729	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	2.17598	39.3	-	JVSU01	117	2104	2018	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197326	GCA_001053535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/535/GCA_001053535.1_ASM105353v1	26230489	137_HINF
Actinomyces oris	544580	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.11516	68.5	-	MSKU01	96	2614	2447	1/5/17	4/6/17	Scaffold	King's College London	SAMN05898720	GCA_001937535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/535/GCA_001937535.1_ASM193753v1	-	R23275
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.9301	55.1	-	JTBZ02	80	4877	4621	11/17/14	3/25/17	Contig	JCVI	SAMN03012817	GCA_000784035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/035/GCA_000784035.2_SPADES_assembly_of_Enterobacter_cloacae_ND10	-	ND10
Vibrio anguillarum	55601	PRJNA283570	283570	Proteobacteria	Gammaproteobacteria	4.44351	45.3341	chromosome I:CP011458.1; chromosome II:CP011459.1	-	2	3412	3214	2/7/17	2/7/17	Chromosome	University of Copenhagen	SAMN03652800	GCA_001989655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/655/GCA_001989655.1_ASM198965v1	-	4299
Sinorhizobium fredii USDA 205	1230631	PRJNA211973	211973	Proteobacteria	Alphaproteobacteria	6.57982	62.3	-	AUTC01	209	6377	5774	12/7/15	4/5/17	Contig	Huazhong Agricultural University	SAMN04301590	GCA_001461695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/461/695/GCA_001461695.1_ASM146169v1	-	USDA 205
Mycoplasma hominis	2098	PRJNA353977	353977	Terrabacteria group	Tenericutes	0.642227	27.2	-	MRAY01	27	584	517	12/16/16	4/6/17	Scaffold	"Blokhina Research Institute of Epidemiology and Microbiology, Nizhny Novgorod, Russia"	SAMN06034726	GCA_001906855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/855/GCA_001906855.1_ASM190685v1	-	M45
Streptococcus parauberis	1348	PRJNA273857	273857	Terrabacteria group	Firmicutes	2.03113	35.7	-	LRBK01	12	2086	1922	3/29/16	4/5/17	Contig	Norfolk State University	SAMN03956446	GCA_001601995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/995/GCA_001601995.1_RP_25_v1	-	RP25
Kingella kingae KK113	1305782	PRJEB1634	194490	Proteobacteria	Betaproteobacteria	1.99218	46.7	-	CBSO01	1	1991	1717	9/11/13	4/1/17	Scaffold	URMITE	SAMEA2272104	GCA_000470005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/005/GCA_000470005.1_KK113	-	KK113
Streptococcus pseudopneumoniae	257758	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.11239	39.9	-	JVJI01	138	2112	1969	7/10/15	4/3/17	Contig	University of Washington	SAMN03197572	GCA_001072665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/665/GCA_001072665.1_ASM107266v1	26230489	380_SPSE
Streptococcus cristatus	45634	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.01952	42.4	-	JWGF01	105	2019	1935	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03196977	GCA_001069915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/915/GCA_001069915.1_ASM106991v1	26230489	1015_SOLI
Xanthomonas perforans	442694	PRJNA276616	276616	Proteobacteria	Gammaproteobacteria	5.20209	64.7	-	JZVH01	84	4682	4357	5/18/15	4/3/17	Contig	Universidade de Sao Paulo	SAMN03378981	GCA_001009745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/745/GCA_001009745.1_v1	26089818	Xp17-12
Aeromonas caviae	648	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.87779	61	-	JTBG01	10	4519	3656	11/14/14	7/6/17	Contig	US Food and Drug Administration 	SAMN02934528	GCA_000783695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/695/GCA_000783695.1_ASM78369v1	-	FDAARGOS_76
Streptobacillus moniliformis	34105	PRJNA319313	319313	Fusobacteria	Fusobacteriia	1.65325	26.2	-	LXKH01	213	1566	1430	6/3/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04892888	GCA_001655975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/975/GCA_001655975.1_ASM165597v1	-	IKC1
Klebsiella aerogenes UCI 27	1400140	PRJNA219277	219277	Proteobacteria	Gammaproteobacteria	5.409	54.9	-	JCKV01	2	5320	5058	2/3/14	4/10/17	Scaffold	Broad Institute	SAMN02356607	GCA_000534255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/255/GCA_000534255.1_Ente_aero_UCI_27_V1	-	UCI 27
Leuconostoc pseudomesenteroides	33968	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.88144	39.1	-	MPBA01	90	1967	1745	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981493	GCA_002092255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/255/GCA_002092255.1_ASM209225v1	28217118	LMGTW6
Xanthomonas gardneri	90270	PRJNA276596	276596	Proteobacteria	Gammaproteobacteria	5.24513	63.6	-	JZJZ01	176	4608	4224	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03378959	GCA_001009625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/625/GCA_001009625.1_ASM100962v1	26089818	SM775-12
Corynebacterium ulcerans NCTC 12077	1258583	PRJNA179437	179437	Terrabacteria group	Actinobacteria	2.61629	53.4	-	AYUJ01	15	2422	2234	11/25/13	4/2/17	Contig	Moredun Research Institute	SAMN02470561	GCA_000498915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/915/GCA_000498915.1_Culc1.0	-	NCTC 12077
Aeromonas veronii	654	PRJNA296464	296464	Proteobacteria	Gammaproteobacteria	4.53329	58.7	-	LKJS01	52	4171	3976	11/19/15	4/4/17	Contig	Texas Tech University	SAMN04099653	GCA_001446575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/575/GCA_001446575.1_ASM144657v1	26824353	TTU2014-115ASC
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.9877	64.1	-	FVAL01	21	4950	4805	3/10/17	3/18/17	Contig	SC	SAMEA2071291	GCA_900130815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/815/GCA_900130815.1_10665_3_32	-	202
Leptospira weilii	28184	PRJNA257145	257145	Spirochaetes	Spirochaetia	4.03366	40.4	-	JQRN01	249	3977	3496	2/24/16	4/5/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947818	GCA_001569375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/375/GCA_001569375.1_ASM156937v1	26833181	56105
Leptospira noguchii	28182	PRJNA257151	257151	Spirochaetes	Spirochaetia	4.68706	35.3	-	JQRC01	298	4226	3809	2/24/16	4/5/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947902	GCA_001569215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/215/GCA_001569215.1_ASM156921v1	26833181	56189
Gallibacterium anatis DSM 16844 = F 149	1121910	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.40863	40	-	JPHN01	117	2319	2200	11/5/14	4/2/17	Contig	University of Copenhagen	SAMN02344110	GCA_000772265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/265/GCA_000772265.1_ASM77226v1	-	F149
Haemophilus haemolyticus M21621	1028805	PRJNA66577	66577	Proteobacteria	Gammaproteobacteria	2.08921	38.4	-	AFQQ01	28	1894	1894	7/29/11	8/5/14	Contig	"Meningitis and Vaccine Preventable Diseases Branch, Centers for Disease Control and Prevention"	SAMN02952886	GCA_000222065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/065/GCA_000222065.2_ASM22206v1	21952546	M21621
Melissococcus plutonius	33970	PRJNA263545	263545	Terrabacteria group	Firmicutes	2.05895	31.1	-	JSBD01	11	1802	1597	7/7/15	4/3/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03103712	GCA_001047555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/555/GCA_001047555.1_ASM104755v1	-	L9
Mycobacterium colombiense	339268	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.945	67.2	-	LZMA01	265	5719	5312	6/17/16	4/5/17	Contig	JCVI	SAMN04634191	GCA_001673505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/505/GCA_001673505.1_ASM167350v1	-	1137323
Mycobacterium africanum MAL010102	1354173	PRJNA211650	211650	Terrabacteria group	Actinobacteria	4.3929	65.6	-	JLAM01	3	4244	4045	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02231117	GCA_000666445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/445/GCA_000666445.1_Myco_afri_MAL010102_V1	-	MAL010102
Pantoea agglomerans	549	PRJNA292535	292535	Proteobacteria	Gammaproteobacteria	4.77592	55.0821	plasmid pPag1:NZ_CM003470.1/CM003470.1; plasmid pPag3:NZ_CM003471.1/CM003471.1	LIME01	18	4496	4335	9/15/15	4/4/17	Contig	JLU	SAMN03996017	GCA_001288285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/285/GCA_001288285.1_ASM128828v1	26659685	P10c
Vibrio nigripulchritudo SFn135	1238448	PRJEB561	222455	Proteobacteria	Gammaproteobacteria	6.47248	45.7	-	CAOD01	125	5806	5705	10/1/13	4/3/17	Contig	Genoscope CEA	SAMEA3146261	GCA_001050715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/715/GCA_001050715.1_ASM105071v1	23739050	SFn135
Burkholderia cepacia	292	PRJNA244019	244019	Proteobacteria	Betaproteobacteria	8.11226	67.1	-	JPGE01	3	7636	7354	9/23/14	4/2/17	Scaffold	Los Alamos National Laboratory	SAMN02796046	GCA_000757365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/365/GCA_000757365.1_BHX_1	25414490	DWS 16B-4
Enterococcus hirae	1354	PRJNA342049	342049	Terrabacteria group	Firmicutes	3.08895	36.6	-	MJDP01	81	2977	2722	4/3/17	4/5/17	Contig	Lethbridge Research Centre	SAMN05735012	GCA_002077355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/355/GCA_002077355.1_ASM207735v1	28270110	F0711E 118
Selenomonas ruminantium	971	PRJEB18361	355799	Terrabacteria group	Firmicutes	3.11679	50.1	-	FRBC01	59	2956	2784	12/2/16	4/6/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216582	GCA_900142515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/515/GCA_900142515.1_IMG-taxon_2654588174_annotated_assembly	-	HD4
Hafnia alvei	569	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.57031	48	-	DFUA01	69	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455651	GCA_002379545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/545/GCA_002379545.1_ASM237954v1	28894102	-
Lactobacillus curvatus	28038	PRJNA343164	343164	Terrabacteria group	Firmicutes	1.80507	42	-	MKGD01	82	1859	1727	2/1/17	4/6/17	Scaffold	ETH Zurich	SAMN05717748	GCA_001982045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/045/GCA_001982045.1_ASM198204v1	-	RI-193
Staphylococcus sciuri	1296	PRJNA339386	339386	Terrabacteria group	Firmicutes	2.96514	32.3	-	MDVV02	84	3006	2878	10/18/16	5/1/17	Contig	Masaryk University	SAMN05590264	GCA_001766785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/785/GCA_001766785.2_ASM176678v2	28406168	P879
Morganella morganii	582	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.83813	51	-	JUVX01	166	3638	3520	7/10/15	4/3/17	Contig	University of Washington	SAMN03197921	GCA_001066005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/005/GCA_001066005.1_ASM106600v1	26230489	716_MMOR
Streptococcus sobrinus TCI-79	1074062	PRJNA71893	71893	Terrabacteria group	Firmicutes	2.11454	43.5	-	AGGL01	247	2122	1901	10/6/11	3/30/17	Contig	JCVI	SAMN02436460	GCA_000227985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/227/985/GCA_000227985.2_SMUT1-NEX_11-79	-	TCI-79
Geobacillus sp. PA-3	1699078	PRJNA292061	292061	Terrabacteria group	Firmicutes	3.64648	48.9	-	LIDX01	183	3662	3419	10/23/15	3/6/17	Contig	JLU	SAMN03963308	GCA_001412125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/125/GCA_001412125.1_ASM141212v1	27818089	PA-3
Actinomyces naeslundii	1655	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.12813	67.9	-	MSRO01	52	2668	2524	1/18/17	4/6/17	Scaffold	King's College London	SAMN05898704	GCA_001956485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/485/GCA_001956485.1_ASM195648v1	-	S44D
Mycobacterium chelonae	1774	PRJNA347845	347845	Terrabacteria group	Actinobacteria	5.25293	63.9	-	MLIF01	63	5203	5081	10/26/16	4/5/17	Contig	University of Georgia	SAMN05897987	GCA_001853775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/775/GCA_001853775.1_ASM185377v1	-	B17_S14
Vibrio campbellii DS40M4	1088888	PRJNA73409	73409	Proteobacteria	Gammaproteobacteria	5.1241	45	-	AGIE01	121	4950	4656	11/28/11	5/19/17	Contig	Universidade Federal Do Rio De Janeiro	SAMN02469786	GCA_000259875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/875/GCA_000259875.1_ASM25987v1	22275102	DS40M4
Staphylococcus xylosus DMB3-Bh1	1353979	PRJNA210599	210599	Terrabacteria group	Firmicutes	2.80984	32.7	-	AURW01	12	2657	2569	9/16/13	4/2/17	Scaffold	CSIR-IMTECH	SAMN02469673	GCA_000467225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/225/GCA_000467225.1_Staphylococcus_xylosus_strain_DMB3-Bh1	-	DMB3-Bh1
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28401	32.4	chromosome:AP017601.1	-	1	-	-	1/24/17	1/27/17	Chromosome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053849	GCA_002356715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/715/GCA_002356715.1_ASM235671v1	-	SR1567
Leclercia adecarboxylata	83655	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.09139	55.2	-	DBUH01	210	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06450752	GCA_002307815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/815/GCA_002307815.1_ASM230781v1	28894102	-
Acinetobacter ursingii	108980	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.64786	39.9	-	DDAF01	55	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457240	GCA_002332885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/885/GCA_002332885.1_ASM233288v1	28894102	-
Campylobacter lanienae	75658	PRJNA341003	341003	Proteobacteria	delta/epsilon subdivisions	1.63193	34.7	-	MJJQ01	10	1686	1608	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687023	GCA_002138515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/515/GCA_002138515.1_ASM213851v1	28854596	P154
Rhodococcus fascians A76	1443897	PRJNA233522	233522	Terrabacteria group	Actinobacteria	6.02785	64.6	-	JMEV01	29	5709	5566	9/30/14	4/11/17	Scaffold	Oregon State University	SAMN02569995	GCA_000760955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/955/GCA_000760955.1_R_fas_A76	-	A76
Chlamydia trachomatis A/HAR-13	315277	PRJNA13885	13885	PVC group	Chlamydiae	1.05197	41.2643	chromosome:NC_007429.1/CP000051.1; plasmid pCTA:NC_007430.1/CP000052.1	-	2	979	900	9/23/05	3/22/17	Complete Genome	Lab of Human Bacterial Pathogenesis	SAMN02603498	GCA_000012125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/125/GCA_000012125.1_ASM1212v1	16177312	A/HAR-13
Xanthomonas vasicola	56459	PRJNA264637	264637	Proteobacteria	Gammaproteobacteria	4.83694	63.4	-	JSBY02	87	4450	3870	11/6/14	4/3/17	Contig	University of Exeter	SAMN03140174	GCA_000772775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/775/GCA_000772775.2_NCPPB902v2	-	NCPPB 902
Leptospira kirschneri serovar Mozdok 1 str. Vehlefans 2	1291233	PRJNA188979	188979	Spirochaetes	Spirochaetia	4.41268	35.9	-	AOWL01	186	4009	3654	3/1/13	5/18/17	Contig	J. Craig Venter Institute	SAMN01919806	GCA_000343555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/555/GCA_000343555.1_CA_glsol061	-	Vehlefans 2
Salinispora pacifica CNY331	1169181	PRJNA175189	175189	Terrabacteria group	Actinobacteria	5.74037	69.9	-	ARHO01	170	5319	4810	4/22/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441693	GCA_000377045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/045/GCA_000377045.1_ASM37704v1	-	CNY331
Xanthomonas arboricola	56448	PRJNA320358	320358	Proteobacteria	Gammaproteobacteria	4.86444	65.6	-	LXIB01	72	4208	3922	6/21/16	4/6/17	Contig	Instituto Nacional de Investigacion y Tecnologia Agraria y Alimentaria (INIA)	SAMN04932730	GCA_001675005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/005/GCA_001675005.1_ASM167500v1	-	CITA 14
Pseudomonas psychrotolerans	237610	PRJNA278260	278260	Proteobacteria	Gammaproteobacteria	5.13021	65	-	LDSZ01	116	4626	4469	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401425	GCA_001477295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/295/GCA_001477295.1_ASM147729v1	26793183	SB8
Chlamydia trachomatis	813	PRJNA316787	316787	PVC group	Chlamydiae	1.05642	41.2638	chromosome:NZ_CP015302.1/CP015302.1; plasmid CtrE-32931_plasmid:NZ_CP015303.1/CP015303.1	-	2	975	908	6/3/16	4/10/17	Complete Genome	CHI: Chlamydien-Wirtszell-Interaktion	SAMN04590087	GCA_001655495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/495/GCA_001655495.1_ASM165549v1	-	E-32931
Chlamydia trachomatis	813	PRJNA316787	316787	PVC group	Chlamydiae	1.05553	41.2638	chromosome:NZ_CP015304.1/CP015304.1; plasmid CtrE-DK-20_plasmid:NZ_CP015305.1/CP015305.1	-	2	980	910	6/3/16	4/10/17	Complete Genome	CHI: Chlamydien-Wirtszell-Interaktion	SAMN04590089	GCA_001655535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/535/GCA_001655535.1_ASM165553v1	-	E-DK-20
Pseudoalteromonas luteoviolacea H33-S	1365252	PRJNA213494	213494	Proteobacteria	Gammaproteobacteria	6.10979	42	-	AUXY01	143	5078	4917	4/22/16	4/5/17	Contig	Technical University of Denmark	SAMN02250936	GCA_001625695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/625/695/GCA_001625695.1_H33-S_1.0	-	H33-S
Cronobacter malonaticus	413503	PRJNA257995	257995	Proteobacteria	Gammaproteobacteria	4.55312	56.7	-	JPZF01	470	4472	4131	8/20/14	4/2/17	Scaffold	"Nottingham Trent University, UK"	SAMN02981214	GCA_000742355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/355/GCA_000742355.1_ASM74235v1	-	1545
Pseudomonas fragi	296	PRJNA397499	397499	Proteobacteria	Gammaproteobacteria	5.05144	58	-	NQKQ01	80	4697	4518	8/24/17	8/27/17	Scaffold	CSIRO Agriculture and Food	SAMN07459806	GCA_002269505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/505/GCA_002269505.1_ASM226950v1	-	F1801
Vibrio cyclitrophicus 1F289	1136162	PRJNA81869	81869	Proteobacteria	Gammaproteobacteria	5.05622	43.5	-	AIDD02	35	4494	4289	3/26/12	4/5/17	Scaffold	Massachusetts Institute of Technology	SAMN02470508	GCA_000256185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/185/GCA_000256185.2_ASM25618v2	22491847	1F289
Enterococcus cecorum	44008	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.49135	36.1	-	NFLC01	108	2514	2303	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473616	GCA_002160685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/685/GCA_002160685.1_ASM216068v1	-	An144
Pseudomonas chlororaphis	587753	PRJNA264850	264850	Proteobacteria	Gammaproteobacteria	6.59558	59.2	-	JSFK01	74	5875	5718	11/14/14	4/2/17	Scaffold	University of Massachusetts Dartmouth	SAMN03143392	GCA_000783395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/395/GCA_000783395.1_ASM78339v1	25540352	EA105
Serratia plymuthica	82996	PRJNA240341	240341	Proteobacteria	Gammaproteobacteria	5.51335	56.2	chromosome:CP007439.1	-	1	5081	4959	4/28/14	5/20/14	Chromosome	Harvard Medical School	SAMN02676618	GCA_000648575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/575/GCA_000648575.1_ASM64857v1	-	V4
Chlamydia trachomatis	813	PRJNA352770	352770	PVC group	Chlamydiae	1.03334	41.2637	chromosome:NZ_CP018052.1/CP018052.1; plasmid pQH111L:NZ_CP018053.1/CP018053.1	-	2	966	894	11/22/16	3/28/17	Complete Genome	Beijing Institute of Microbiology and Epidemiology	SAMN05991867	GCA_001885175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/175/GCA_001885175.1_ASM188517v1	-	QH111L
Alcaligenes faecalis	511	PRJNA353361	353361	Proteobacteria	Betaproteobacteria	4.34962	56.8	-	MSZP01	31	3991	3892	5/9/17	5/22/17	Contig	New Jersey Medical School-Rutgers University	SAMN06200346	GCA_002119995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/995/GCA_002119995.1_ASM211999v1	-	GZAF3
Bradyrhizobium elkanii 587	1156987	PRJNA86995	86995	Proteobacteria	Alphaproteobacteria	8.67316	63.6	-	AJJK01	2430	-	-	4/5/12	5/13/16	Contig	INCT of Biological Nitgrogen Fixation	SAMN02471378	GCA_000257685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/685/GCA_000257685.2_BelkAss1.0	22689236	587
Staphylococcus equorum	246432	PRJNA316783	316783	Terrabacteria group	Firmicutes	2.68716	33	-	LWJU01	98	2617	2491	11/10/16	4/5/17	Contig	CSIR-Institute of Microbial Technology	SAMN04590070	GCA_001876625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/625/GCA_001876625.1_ASM187662v1	-	RE2.35
Chlamydia trachomatis A2497	580047	PRJNA53575	53575	PVC group	Chlamydiae	1.05181	41.2637	chromosome:NC_017437.1/CP002401.1; plasmid Plasmid0001:NC_017438.1/CP002402.1	-	2	983	912	9/28/11	4/10/17	Complete Genome	Rocky Mountain Laboratory	SAMN02603770	GCA_000226605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/605/GCA_000226605.1_ASM22660v1	21987657	A2497
Paeniclostridium sordellii	1505	PRJEB8130	277655	Terrabacteria group	Firmicutes	3.70794	27.2	-	CELH01	51	3671	3543	3/13/15	4/4/17	Contig	WTSI	SAMEA1572096	GCA_001372495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/495/GCA_001372495.1_W10	-	W10
Bordetella holmesii CDC-H635-BH	1331208	PRJNA202120	202120	Proteobacteria	Betaproteobacteria	3.56899	62.7	-	JGAA01	173	3600	3149	4/29/14	4/2/17	Contig	JCVI	SAMN02231543	GCA_000649025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/025/GCA_000649025.1_gbb12v01	24948754	CDC-H635-BH
Oribacterium sp. UBA4274	1947017	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.98471	42.4	-	DGVW01	120	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452402	GCA_002396005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/005/GCA_002396005.1_ASM239600v1	28894102	-
Acinetobacter sp. CIP 102159	1144667	PRJNA183312	183312	Proteobacteria	Gammaproteobacteria	2.97326	41.9	-	APOZ01	2	2893	2642	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01828172	GCA_000368285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/285/GCA_000368285.1_Acin_sp_CIP_102159_V1	-	CIP 102159
Bacillus safensis	561879	PRJNA361207	361207	Terrabacteria group	Firmicutes	3.70089	41.6	-	MTYG01	23	3859	3705	5/19/17	6/15/17	Contig	"MedBiotech laboratory, faculty of medicine and pharmacy, rabat/ Mohamed V university rabat"	SAMN06227047	GCA_002151195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/195/GCA_002151195.1_ASM215119v1	-	BcP62
Klebsiella sp. HMSC16C06	1581110	PRJNA269879	269879	Proteobacteria	Gammaproteobacteria	5.72119	57.1	-	LUAQ01	58	5727	5463	10/17/16	2/21/17	Scaffold	The Genome Institute at Washington University	SAMN03287030	GCA_001808325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/325/GCA_001808325.1_ASM180832v1	-	HMSC16C06
Flavobacterium sp. KJJ	1270193	PRJNA236204	236204	FCB group	Bacteroidetes/Chlorobi group	4.59763	33.3	-	JARP01	10	3966	3881	6/16/14	4/11/17	Contig	GCAT-SEEK	SAMN02595199	GCA_000708595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/595/GCA_000708595.2_Next_Generation_Sequence_Analysis	-	KJJ
Frankia sp. BR	683307	PRJNA282820	282820	Terrabacteria group	Actinobacteria	5.22724	70	-	LRTJ01	180	4662	4225	5/4/16	4/17/17	Contig	University of New Hampshire	SAMN03579665	GCA_001636575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/575/GCA_001636575.1_ASM163657v1	-	BR
Chlamydia trachomatis	813	PRJNA316787	316787	PVC group	Chlamydiae	1.05052	41.2636	chromosome:NZ_CP015294.1/CP015294.1; plasmid CtrE-103:NZ_CP015295.1/CP015295.1	-	2	974	909	6/3/16	3/28/17	Complete Genome	CHI: Chlamydien-Wirtszell-Interaktion	SAMN04590078	GCA_001655335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/335/GCA_001655335.1_ASM165533v1	-	E-103
Clostridium sp. KLE 1755	1226325	PRJNA173640	173640	Terrabacteria group	Firmicutes	6.64075	47.9	-	AWST01	143	5777	5494	9/12/13	4/16/17	Scaffold	Washington University	SAMN02436820	GCA_000466465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/465/GCA_000466465.2_ASM46646v2	-	KLE 1755
Sphingomonas sp. Y57	334801	PRJNA283569	283569	Proteobacteria	Alphaproteobacteria	5.60022	66	-	LDES01	190	5357	5115	5/29/15	4/16/17	Scaffold	Nanjing Agriculture University	SAMN03652799	GCA_001015195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/195/GCA_001015195.1_ASM101519v1	-	Y57
Chlamydia trachomatis	813	PRJNA316787	316787	PVC group	Chlamydiae	1.05051	41.2636	chromosome:NZ_CP015296.1/CP015296.1; plasmid CtrE-160_plasmid:NZ_CP015297.1/CP015297.1	-	2	975	910	6/3/16	4/10/17	Complete Genome	CHI: Chlamydien-Wirtszell-Interaktion	SAMN04590080	GCA_001655375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/375/GCA_001655375.1_ASM165537v1	-	E-160
Rhodococcus sp. 114MFTsu3.1	1172184	PRJNA187947	187947	Terrabacteria group	Actinobacteria	5.55264	64.7	-	ARTN01	35	5177	5052	4/26/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441641	GCA_000383555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/555/GCA_000383555.1_ASM38355v1	-	114MFTsu3.1
Enterobacter sp. MGH 23	1329827	PRJNA201938	201938	Proteobacteria	Gammaproteobacteria	5.10816	54.7	-	AYJH01	4	5020	4721	10/30/13	4/10/17	Scaffold	Broad Institute	SAMN02138563	GCA_000493035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/035/GCA_000493035.1_Ente_cloa_complex_MGH_23_V1	-	MGH 23
Staphylococcus sp. HMSC14D01	1581101	PRJNA269870	269870	Terrabacteria group	Firmicutes	2.49041	32.9	-	LUAL01	93	2428	2318	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03287017	GCA_001808105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/105/GCA_001808105.1_ASM180810v1	-	HMSC14D01
Corynebacterium sp. KPL1856	1203563	PRJNA169443	169443	Terrabacteria group	Actinobacteria	2.46575	58.4	-	AXLW01	6	2340	2232	10/21/13	4/17/17	Scaffold	Broad Institute	SAMN02597003	GCA_000478055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/055/GCA_000478055.1_Cory_sp_KPL1856_V1	-	KPL1856
Chlamydia trachomatis	813	PRJNA316787	316787	PVC group	Chlamydiae	1.05051	41.2636	chromosome:NZ_CP015298.1/CP015298.1; plasmid CtrE-547_plasmid:NZ_CP015299.1/CP015299.1	-	2	974	908	6/3/16	4/10/17	Complete Genome	CHI: Chlamydien-Wirtszell-Interaktion	SAMN04590083	GCA_001655415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/415/GCA_001655415.1_ASM165541v1	-	E-547
Escherichia sp. TW15838	910237	PRJNA56127	56127	Proteobacteria	Gammaproteobacteria	5.26542	50.1	-	AEJX01	517	5457	5034	4/21/11	5/18/17	Contig	"Georgia Institute of Technology, School of Civil and Environmental Engineering"	SAMN02469832	GCA_000208485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/208/485/GCA_000208485.2_ASM20848v2	21482770	TW15838
Nostoc sp. 'Peltigera membranacea cyanobiont' 210A	2014529	PRJNA389199	389199	Terrabacteria group	Cyanobacteria/Melainabacteria group	8.32591	41.7	-	NOLJ01	30	7130	6601	8/11/17	8/15/17	Scaffold	University of Iceland	SAMN07191894	GCA_002246015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/015/GCA_002246015.1_ASM224601v1	-	210A
Shewanella sp. Sh95	1689868	PRJNA290501	290501	Proteobacteria	Gammaproteobacteria	4.82087	46.3	-	LGYY01	289	4240	3985	10/7/15	4/11/17	Contig	Instituto de Investigaciones en Microbiologia y Parasitologia Medica (UBA/CONICET)	SAMN03892644	GCA_001308045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/308/045/GCA_001308045.1_ASM130804v1	-	Sh95
Bradyrhizobium sp. Ai1a-2	196490	PRJNA195749	195749	Proteobacteria	Alphaproteobacteria	9.02927	62.6	-	AUEZ01	246	8411	7810	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440842	GCA_000426245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/245/GCA_000426245.1_ASM42624v1	26380037	Ai1a-2
Streptococcus sp. M334	563038	PRJNA38757	38757	Terrabacteria group	Firmicutes	2.20701	39.2	-	ACRL01	32	2235	2008	1/19/11	4/17/17	Scaffold	Broad Institute	SAMN02463756	GCA_000187745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/745/GCA_000187745.1_ASM18774v1	-	M334
Mycobacterium sp. MS1601	1936029	PRJNA359161	359161	Terrabacteria group	Actinobacteria	6.82913	66.0938	chromosome:NZ_CP019420.1/CP019420.1	-	6	6575	6244	2/3/17	4/17/17	Chromosome	"Biotechnology department, Lund Universit"	SAMN06187687	GCA_001984215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/215/GCA_001984215.1_ASM198421v1	26804932	MS1601
Bifidobacterium sp. UBA1109	1946094	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.62552	61.7	-	DCBK01	194	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06451563	GCA_002313975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/975/GCA_002313975.1_ASM231397v1	28894102	-
Serratia sp. DD3	1410619	PRJNA223507	223507	Proteobacteria	Gammaproteobacteria	5.27353	49.2	-	AYKS02	123	4756	4416	11/13/13	4/9/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02743684	GCA_000496755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/755/GCA_000496755.2_ASM49675v2	25212623	DD3
Polaromonas sp. 39-63-25	1970420	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	4.83167	63	-	NCJH01	54	4736	4606	8/16/17	8/16/17	Contig	None	SAMN06622221	GCA_002278925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/925/GCA_002278925.1_ASM227892v1	-	-
Sulfurovum sp. 24-42-9	1970443	PRJNA379596	379596	Proteobacteria	delta/epsilon subdivisions	1.94856	42	-	NCHL01	137	2057	1988	8/16/17	8/16/17	Scaffold	None	SAMN06622269	GCA_002281835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/835/GCA_002281835.1_ASM228183v1	-	-
Pantoea sp. NGS-ED-1003	1526743	PRJNA255947	255947	Proteobacteria	Gammaproteobacteria	4.80906	58.8	-	JPQA01	49	4660	4431	8/8/14	4/9/17	Contig	Cork Institute of Technology	SAMN02940976	GCA_000738765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/765/GCA_000738765.1_ASM73876v1	25212624	NGS-ED-1003
Prevotella sp. HMSC073D09	1739459	PRJNA300109	300109	FCB group	Bacteroidetes/Chlorobi group	3.90357	47	-	LTVI01	162	2987	2758	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480379	GCA_001814145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/145/GCA_001814145.1_ASM181414v1	-	HMSC073D09
Enterococcus sp. HMSC058D07	1739273	PRJNA299923	299923	Terrabacteria group	Firmicutes	2.78774	37.8	-	LTHB01	278	2858	2699	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477607	GCA_001810855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/855/GCA_001810855.1_ASM181085v1	-	HMSC058D07
Lactobacillus sp. HMSC078F07	1715181	PRJNA296309	296309	Terrabacteria group	Firmicutes	2.91413	46.6	-	LTIK01	59	2905	2717	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477545	GCA_001810115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/115/GCA_001810115.1_ASM181011v1	-	HMSC078F07
Novosphingobium sp. KN65.2	1478134	PRJEB5972	266948	Proteobacteria	Alphaproteobacteria	5.02485	63.1	-	CCBH01	243	4842	4617	3/25/15	4/11/17	Contig	KU Leuven	SAMEA3158492	GCA_001368935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/935/GCA_001368935.1_CLCbio	-	KN65.2
Treponema sp. GWC1_61_84	1802380	PRJNA288027	288027	Spirochaetes	Spirochaetia	4.7425	61.2	-	MIDM01	158	4247	4034	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314122	GCA_001831045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/045/GCA_001831045.1_ASM183104v1	27774985	-
Citrobacter sp. MGH105	1686380	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.51974	51.7	-	LESP01	6	5480	5219	6/19/15	4/10/17	Scaffold	Broad Institute	SAMN03280165	GCA_001037485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/485/GCA_001037485.1_Citr_freu_complex_MGH105_V1	-	MGH105
Methylobacterium sp. Leaf92	1736248	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	5.45386	68.3	-	LMMQ01	45	5097	4778	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151628	GCA_001422305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/305/GCA_001422305.1_Leaf92	26633631	Leaf92
Paracoccus sp. SCN 68-21	1660154	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	3.37583	67.9	-	MEES01	87	3264	3126	9/13/16	9/13/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03652468	GCA_001724535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/535/GCA_001724535.1_ASM172453v1	26031303	-
Candidatus Arthromitus sp. SFB-mouse-SU	1109438	PRJNA76365	76365	Terrabacteria group	Firmicutes	1.56616	27.9	-	AGVP01	10	1549	1502	3/14/12	7/29/15	Contig	"Stanford University, Relman Lab"	SAMN02471012	GCA_000252785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/785/GCA_000252785.2_ASM25278v2	-	SFB-mouse-SU
Nocardioides sp. Soil777	1736409	PRJNA298127	298127	Terrabacteria group	Actinobacteria	4.65091	71.7	-	LMSN01	21	4480	4375	11/2/15	4/11/17	Scaffold	ETH Zurich	SAMN04155674	GCA_001428425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/425/GCA_001428425.1_Soil777	26633631	Soil777
Epulopiscium sp. AS2M-Bin001	1764958	PRJNA294498	294498	Terrabacteria group	Firmicutes	3.18971	33.9	-	LNZM01	166	2310	2165	2/27/17	2/27/17	Scaffold	King Abdullah University of Science and Technology (KAUST)	SAMN04288906	GCA_002007295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/295/GCA_002007295.1_AS2M	-	-
Erythrobacter sp. HI0074	1822249	PRJNA305749	305749	Proteobacteria	Alphaproteobacteria	3.1481	64.4	-	LWFO01	583	3220	2861	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580788	GCA_001634995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/995/GCA_001634995.1_ASM163499v1	-	HI0074
Sulfitobacter sp. EhC04	1849168	PRJNA321723	321723	Proteobacteria	Alphaproteobacteria	4.85239	61.3	-	LXYI01	89	4698	4546	5/24/16	4/12/17	Contig	University of Alberta	SAMN04965932	GCA_001650875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/875/GCA_001650875.1_ASM165087v1	-	EhC04
Polaribacter sp. BACL8 MAG-120619-bin41	1655555	PRJNA273799	273799	FCB group	Bacteroidetes/Chlorobi group	1.49894	38.7	-	LICL01	658	1553	1155	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741985	GCA_001438245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/438/245/GCA_001438245.1_ASM143824v1	-	-
Marinobacter sp. P4B1	1119533	PRJNA299400	299400	Proteobacteria	Gammaproteobacteria	3.74088	58.2869	plasmid pMARS01:NZ_CM003615.1/CM003615.1	LLXM01	15	3449	3332	11/20/15	4/11/17	Contig	University of Houston	SAMN04201528	GCA_001447135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/447/135/GCA_001447135.1_ASM144713v1	26798109	P4B1
Acidovorax sp. Root402	1736527	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	5.14027	64.9	-	LMDQ01	19	4717	4612	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155796	GCA_001425125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/125/GCA_001425125.1_Root402	26633631	Root402
Psychrobacter sp. Rd 27.2	1926479	PRJNA353858	353858	Proteobacteria	Gammaproteobacteria	3.07349	47	-	MRYB01	197	2501	2416	12/24/16	4/16/17	Contig	Universidad de Santiago de Compostela	SAMN06020700	GCA_001921755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/921/755/GCA_001921755.1_ASM192175v1	-	Rd 27.2
Caulobacter sp. CCH9-E1	1768768	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	4.62038	67.7	-	LSJA01	391	4400	4174	2/10/16	4/12/17	Contig	Georgia Institute of Technology	SAMN04299451	GCA_001556515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/515/GCA_001556515.1_ASM155651v1	-	CCH9-E1
Geobacter sp. UBA4074	1961393	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.50589	59	-	DFYU01	162	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452279	GCA_002383415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/415/GCA_002383415.1_ASM238341v1	28894102	-
Janthinobacterium sp. MP5059B	1766683	PRJNA309035	309035	Proteobacteria	Betaproteobacteria	6.46334	62.7	-	LRHX01	25	5775	5593	10/11/16	4/13/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04320692	GCA_001758645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/645/GCA_001758645.1_ASM175864v1	27833590	MP5059B
Eubacterium sp. CAG:603	1262891	PRJEB954	206867	Terrabacteria group	Firmicutes	2.59787	33.4	-	CAZI01	73	2315	2287	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138482	GCA_000431895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/895/GCA_000431895.1_MGS603	-	-
Alcanivorax sp. HI0083	1822258	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	4.44691	58.1	-	LWFX01	1795	4336	3471	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580797	GCA_001635175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/175/GCA_001635175.1_ASM163517v1	-	HI0083
Brevundimonas sp. Root608	1736569	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	2.78965	69	-	LMGT01	11	2786	2698	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04155838	GCA_001427825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/825/GCA_001427825.1_Root608	26633631	Root608
Pedobacter sp. UBA1654	1947057	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.70527	43.2	-	DCLG01	109	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453959	GCA_002320935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/935/GCA_002320935.1_ASM232093v1	28894102	-
Pseudovibrio sp. W64	1735583	PRJNA298121	298121	Proteobacteria	Alphaproteobacteria	5.93592	51.4	-	LMCI01	49	5417	5249	4/19/16	4/12/17	Scaffold	University College Cork	SAMN04147123	GCA_001623145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/145/GCA_001623145.1_ASM162314v1	27065959	W64
Stenotrophomonas sp. KAs 5-3	1915389	PRJNA352524	352524	Proteobacteria	Gammaproteobacteria	5.00709	65.8	-	MQNP01	782	4931	4077	1/30/17	4/17/17	Contig	Indian Institute of Technology Kharagpur	SAMN05981821	GCA_001975525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/525/GCA_001975525.1_ASM197552v1	-	KAs 5-3
Thermotoga sp. 47_83	1635261	PRJNA278302	278302	Thermotogae	Thermotogae	1.25374	46.6	-	LGFM01	213	1430	1430	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445139	GCA_001508875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/508/875/GCA_001508875.1_ASM150887v1	26787827	-
Paenibacillus sp. RUD330	2023772	PRJNA396653	396653	Terrabacteria group	Firmicutes	5.56277	59.1	chromosome:NZ_CP022655.1/CP022655.1	-	1	5027	4844	8/8/17	8/10/17	Chromosome	Moscow State University	SAMN07430240	GCA_002243345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/345/GCA_002243345.1_ASM224334v1	-	RUD330
Ruminococcus sp. CAG:60	1262964	PRJEB953	206866	Terrabacteria group	Firmicutes	3.08752	45.3	-	CAYA01	211	2770	2748	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138455	GCA_000431355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/355/GCA_000431355.1_MGS60	-	-
Thioalkalivibrio sp. ALE31	1158182	PRJNA176947	176947	Proteobacteria	Gammaproteobacteria	2.77036	67.3	-	ARIG01	16	2723	2591	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441681	GCA_000377405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/405/GCA_000377405.1_ASM37740v1	-	ALE31
Bacteroides sp. 3_1_23	457390	PRJNA38771	38771	FCB group	Bacteroidetes/Chlorobi group	6.52018	41.7	-	ACRS01	20	5089	4833	6/15/10	5/18/17	Scaffold	Broad Institute	SAMN02463761	GCA_000162555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/555/GCA_000162555.1_ASM16255v1	-	3_1_23
Exiguobacterium sp. NG55	375477	PRJNA218031	218031	Terrabacteria group	Firmicutes	3.13847	48.2	-	JPOD01	5	3256	3127	7/24/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02744767	GCA_000733785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/785/GCA_000733785.1_ASM73378v1	25323723	NG55
Coprobacillus sp. CAG:235_29_27	1896995	PRJNA321218	321218	Terrabacteria group	Firmicutes	2.45658	29.2	-	MNSC01	81	2522	2375	12/23/16	12/23/16	Scaffold	None	SAMN05717260	GCA_001916255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/255/GCA_001916255.1_ASM191625v1	27819664	-
Shigella sp. FC1056	1892898	PRJNA339983	339983	Proteobacteria	Gammaproteobacteria	4.51065	50.7	-	MECW01	635	4889	4157	9/8/16	9/8/16	Scaffold	Christian Medical College	SAMN05617060	GCA_001722125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/125/GCA_001722125.1_ASM172212v1	-	FC1056
Prochlorococcus sp. MIT 1303	1723647	PRJNA296588	296588	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.56015	50.5	-	LVHK01	47	2549	2419	4/25/16	4/12/17	Contig	MIT	SAMN04100954	GCA_001631965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/965/GCA_001631965.1_ASM163196v1	-	MIT 1303
Fusobacterium sp. CAG:439	1262899	PRJEB881	206828	Fusobacteria	Fusobacteriia	2.1859	34.7	-	CBJH01	90	2349	2311	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138793	GCA_000438175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/175/GCA_000438175.1_MGS439	-	-
uncultured Desulfovibrio sp.	167968	PRJEB14294	390586	Proteobacteria	delta/epsilon subdivisions	3.46398	58.1	chromosome KL86DES1:LT608333.1	FMJC01	1	6818	6658	6/14/17	6/14/17	Chromosome	Genoscope CEA	SAMEA4384482	GCA_900095395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/395/GCA_900095395.1_APW_KL86DES1_v1	-	-
Actinomyces sp. HPA0247	1203556	PRJNA169432	169432	Terrabacteria group	Actinobacteria	2.43044	65.1	-	ATCA01	3	2057	1958	6/13/13	4/17/17	Scaffold	Broad Institute	SAMN02596975	GCA_000411415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/415/GCA_000411415.1_Acti_sp_HPA0247_V1	-	HPA0247
Micromonospora sp. TSRI0369	1703936	PRJNA293172	293172	Terrabacteria group	Actinobacteria	6.96946	72.8	-	LIVU01	27	6296	6090	12/15/16	4/17/17	Scaffold	The Scripps Research Institute	SAMN03999385	GCA_001905625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/625/GCA_001905625.1_ASM190562v1	27999165	TSRI0369
Parabacteroides sp. AT13	2025877	PRJNA397723	397723	FCB group	Bacteroidetes/Chlorobi group	5.0307	45.3	-	NQMH01	3	4254	3991	8/28/17	8/30/17	Contig	Kyung Hee University 	SAMN07485760	GCA_002272965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/965/GCA_002272965.1_ASM227296v1	-	AT13
Ralstonia sp. JGI 0001001-B07	1268341	PRJNA183575	183575	Proteobacteria	Betaproteobacteria	5.44436	63.7	-	AXYB01	111	-	-	10/25/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02440731	GCA_000483225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/225/GCA_000483225.1_ASM48322v1	-	JGI 0001001-B07
Propionibacterium sp. HMSC065F07	1739345	PRJNA299995	299995	Terrabacteria group	Actinobacteria	2.4874	60	-	LTEQ01	10	2491	2274	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477653	GCA_001812235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/235/GCA_001812235.1_ASM181223v1	-	HMSC065F07
Olsenella sp. An188	1965579	PRJNA377666	377666	Terrabacteria group	Actinobacteria	2.13617	68.7	-	NFKF01	16	1897	1802	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473651	GCA_002160255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/255/GCA_002160255.1_ASM216025v1	-	An188
Alistipes sp. CAG:435	1262695	PRJEB879	206814	FCB group	Bacteroidetes/Chlorobi group	2.89469	51.8	-	CBGN01	86	2328	2286	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138555	GCA_000433355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/355/GCA_000433355.1_MGS435	-	-
Campylobacter sp. RM9262	1895638	PRJNA341056	341056	Proteobacteria	delta/epsilon subdivisions	1.70749	32.1	-	MJLQ01	86	1769	1689	5/15/17	9/19/17	Contig	USDA	SAMN05687076	GCA_002139175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/175/GCA_002139175.1_ASM213917v1	28854596	RM9262
Neisseria sp. HMSC059F02	1715048	PRJNA296175	296175	Proteobacteria	Betaproteobacteria	2.47621	50.8	-	LTKB01	167	2401	2194	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04495793	GCA_001809245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/245/GCA_001809245.1_ASM180924v1	-	HMSC059F02
Porphyromonas sp. 31_2	658663	PRJNA39411	39411	FCB group	Bacteroidetes/Chlorobi group	4.88787	45.2	-	ACUD01	6	4575	4498	6/25/14	6/25/14	Scaffold	Broad Institute	SAMN00103275	GCA_000712235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/235/GCA_000712235.1_Porphyromonas_sp_31_2_V2	-	31_2
Capnocytophaga sp. oral taxon 412 str. F0487	1125721	PRJNA78903	78903	FCB group	Bacteroidetes/Chlorobi group	2.59078	39.5	-	AJZR01	62	2307	2168	6/25/12	4/17/17	Contig	J. Craig Venter Institute	SAMN00792225	GCA_000271925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/925/GCA_000271925.1_Coraltaxon412F0487v1.0	-	F0487
Collinsella sp. UBA1408	1946383	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.477	64.5	-	DBPY01	73	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06457172	GCA_002305035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/035/GCA_002305035.1_ASM230503v1	28894102	-
Thalassospira sp. UBA848	1947677	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	4.27563	54.3	-	DBGS01	146	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450575	GCA_002295455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/455/GCA_002295455.1_ASM229545v1	28894102	-
Alteromonas sp. TMED35	1986603	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	4.35717	44.2	-	NHCO01	103	3772	3631	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971889	GCA_002173035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/035/GCA_002173035.1_ASM217303v1	-	-
Afipia sp. Root123D2	1736436	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	4.79893	61.5	-	LMDP01	7	4623	4453	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04155705	GCA_001425835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/835/GCA_001425835.1_Root123D2	26633631	Root123D2
Pseudonocardia sp. Ae706_Ps2	1885035	PRJNA336262	336262	Terrabacteria group	Actinobacteria	6.7621	73.4	-	MCIQ01	21	6268	5886	1/4/17	4/17/17	Scaffold	University of East Anglia	SAMN05507083	GCA_001932325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/325/GCA_001932325.1_ASM193232v1	-	Ae706_Ps2
Haemophilus sp. CCUG 60358	1859695	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.09106	39.5	-	LZOZ01	20	2102	1976	7/5/16	4/13/17	Scaffold	TAILORED-Treatment project	SAMN05225442	GCA_001679485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/485/GCA_001679485.1_ASM167948v1	-	CCUG 60358
Methanosarcina sp. 795	1653396	PRJNA283204	283204	Euryarchaeota	Methanomicrobia	3.12241	41.3	chromosome:CP011449.1	-	1	2691	2416	10/22/15	10/22/15	Chromosome	Agriculture and Agri-Food Canada	SAMN03610014	GCA_001402855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/855/GCA_001402855.1_ASM140285v1	-	-
Selenomonas sp. FOBRC6	936572	PRJNA78575	78575	Terrabacteria group	Firmicutes	2.35255	57.1	-	ALKG01	149	2309	2145	8/10/12	4/17/17	Contig	J. Craig Venter Institute	SAMN00828780	GCA_000286455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/455/GCA_000286455.1_SspFOBRC6v1.0	-	FOBRC6
Thiomonas sp. 14-64-326	1970449	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	2.86154	63.8	-	NCKK01	618	3132	2639	8/16/17	8/16/17	Scaffold	None	SAMN06622192	GCA_002279145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/145/GCA_002279145.1_ASM227914v1	-	-
Rhodanobacter sp. C01	1945856	PRJNA369723	369723	Proteobacteria	Gammaproteobacteria	3.98137	63	-	MUNR01	14	3552	3480	2/16/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN06293016	GCA_002001045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/045/GCA_002001045.1_ASM200104v1	-	C01
Rothia sp. HMSC065C12	1739340	PRJNA299990	299990	Terrabacteria group	Actinobacteria	2.27429	59.5	-	LTEV01	17	1815	1723	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477648	GCA_001812085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/085/GCA_001812085.1_ASM181208v1	-	HMSC065C12
Sphingobium sp. DC-2	1303256	PRJNA246654	246654	Proteobacteria	Alphaproteobacteria	4.99631	64.1	-	JNAC01	166	4897	4677	7/7/14	4/9/17	Contig	Nanjing Agricultural University	SAMN02769460	GCA_000722555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/555/GCA_000722555.1_ASM72255v1	24928877	DC-2
Halomonas sp. HL-48	1479235	PRJNA242134	242134	Proteobacteria	Gammaproteobacteria	3.74023	58.9	-	JMMC01	1	3412	3286	5/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743353	GCA_000686925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/925/GCA_000686925.1_ASM68692v1	-	HL-48
Idiomarina sp. UBA1478	1946638	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.24416	45.2	-	DCSA01	255	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453302	GCA_002325405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/405/GCA_002325405.1_ASM232540v1	28894102	-
Acidiphilium sp. 34-60-192	1970296	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	3.10684	60.1	-	NCJY01	89	3029	2695	8/16/17	8/16/17	Scaffold	None	SAMN06622204	GCA_002282645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/645/GCA_002282645.1_ASM228264v1	-	-
Aeromicrobium sp. REDSEA-S42_B4	1811529	PRJNA289734	289734	Terrabacteria group	Actinobacteria	3.46575	72.1	-	LUNI01	54	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534558	GCA_001628515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/515/GCA_001628515.1_ASM162851v1	27377622	-
Chlamydia trachomatis	813	PRJNA316787	316787	PVC group	Chlamydiae	1.05021	41.2636	chromosome:NZ_CP015300.1/CP015300.1; plasmid CtrE-8873_plasmid:NZ_CP015301.1/CP015301.1	-	2	974	910	6/3/16	4/10/17	Complete Genome	CHI: Chlamydien-Wirtszell-Interaktion	SAMN04590085	GCA_001655455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/455/GCA_001655455.1_ASM165545v1	-	E-8873
Sulfurimonas sp. RIFOXYD12_FULL_36_11	1802260	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.06622	35.5	-	MICG01	750	2303	1558	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314646	GCA_001830795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/795/GCA_001830795.1_ASM183079v1	27774985	-
Chryseobacterium sp. YR477	1500295	PRJNA247537	247537	FCB group	Bacteroidetes/Chlorobi group	5.00728	36.6	-	JUGP01	8	4519	4414	12/9/14	4/10/17	Scaffold	DOE Joint Genome Institute	SAMN02787075	GCA_000799375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/375/GCA_000799375.1_ASM79937v1	-	YR477
Cellulomonas sp. SN7	1689271	PRJEB12545	310078	Terrabacteria group	Actinobacteria	4.05783	72.4	-	FCOT01	13	3699	3553	1/30/16	4/12/17	Contig	URMITE	SAMEA3857552	GCA_900046455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/455/GCA_900046455.1_Cellulomonas_timonensis	-	SN7
Methylophaga sp. UBA1464	1946866	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.86879	44.5	-	DCSO01	117	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454072	GCA_002325665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/665/GCA_002325665.1_ASM232566v1	28894102	-
Mesorhizobium sp. Root157	1736477	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	4.19338	61.5	-	LMGJ01	38	4103	3942	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155746	GCA_001427385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/385/GCA_001427385.1_Root157	26633631	Root157
Variovorax sp. OK202	1884311	PRJEB16807	350939	Proteobacteria	Betaproteobacteria	8.802	68	-	FNZJ01	70	8102	7820	10/29/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05518853	GCA_900109235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/235/GCA_900109235.1_IMG-taxon_2687453690_annotated_assembly	-	OK202
Vibrio crassostreae 9ZC77	1191302	PRJNA167007	167007	Proteobacteria	Gammaproteobacteria	4.82006	44.5	-	AJZA02	595	4365	4022	6/25/12	4/5/17	Scaffold	Broad Institute	SAMN02470499	GCA_000272065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/065/GCA_000272065.2_ASM27206v2	22955834	9ZC77
Xanthomonas translucens pv. translucens	134875	PRJNA266586	266586	Proteobacteria	Gammaproteobacteria	4.54476	67.8	-	JTEM01	763	4007	3490	12/18/15	4/4/17	Contig	XANTHOMIX	SAMN03168416	GCA_001469515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/515/GCA_001469515.1_XTT_UPB787_V1.0	-	UPB787
Snodgrassella alvi	1196083	PRJNA339423	339423	Proteobacteria	Betaproteobacteria	2.50268	41.2	-	NAHD01	75	2295	2193	4/13/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603559	GCA_002088585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/585/GCA_002088585.1_ASM208858v1	-	A-2-12
Microbacterium sp. C448	1177594	PRJEB4762	231715	Terrabacteria group	Actinobacteria	3.25225	67.4	-	CBVQ01	267	3195	2950	1/6/14	4/9/17	Scaffold	INRA DIJON	SAMEA3138945	GCA_000582705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/705/GCA_000582705.1_MIC448	24526651	C448
Cupriavidus sp. SHE	1539143	PRJNA270002	270002	Proteobacteria	Betaproteobacteria	7.06924	63.6	-	JWMB01	117	6600	6362	12/31/14	4/10/17	Contig	Dalian University of Technology	SAMN03261530	GCA_000812445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/445/GCA_000812445.1_ASM81244v1	-	SHE
Thioclava sp. F34-6	1973003	PRJNA380867	380867	Proteobacteria	Alphaproteobacteria	3.93036	64	-	NBOA01	33	3773	3667	6/30/17	7/3/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN06650273	GCA_002213235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/235/GCA_002213235.1_ASM221323v1	-	F34-6
Hyphomonas sp. 34-62-18	1970392	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	3.54479	61.9	-	NCJT01	524	3753	3562	8/16/17	8/16/17	Scaffold	None	SAMN06622209	GCA_002282565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/565/GCA_002282565.1_ASM228256v1	-	-
Halorubrum sp. Ea1	1480718	PRJNA232799	232799	Euryarchaeota	Halobacteria	3.92673	67.1	-	NHPG01	157	3878	3584	8/15/17	8/17/17	Scaffold	University of Conn.	SAMN02716038	GCA_002252965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/965/GCA_002252965.1_ASM225296v1	24782836	Ea1
Mycobacterium fortuitum	1766	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.12636	66.3	-	LZKN01	145	5970	5736	6/17/16	4/5/17	Contig	JCVI	SAMN04634204	GCA_001672835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/835/GCA_001672835.1_ASM167283v1	-	E2981
Aeromonas sp. YN13HZO-058	1921564	PRJNA354843	354843	Proteobacteria	Gammaproteobacteria	4.5812	58.8	-	MQSY01	82	4218	3978	12/23/16	4/16/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, China CDC"	SAMN06052236	GCA_001921245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/921/245/GCA_001921245.1_ASM192124v1	-	YN13HZO-058
Elizabethkingia meningoseptica	238	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	3.9585	36.4	-	MAHC01	17	3595	3501	3/8/17	3/11/17	Contig	CDC	SAMN05255848	GCA_002023465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/465/GCA_002023465.1_ASM202346v1	-	CSID_3000516359
Chryseobacterium indologenes	253	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.84279	36.5	-	DGQW01	237	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451895	GCA_002390905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/905/GCA_002390905.1_ASM239090v1	28894102	-
Pluralibacter gergoviae	61647	PRJNA285085	285085	Proteobacteria	Gammaproteobacteria	5.4027	59	-	LDZI01	80	5178	4908	6/23/15	4/3/17	Scaffold	UCSF	SAMN03737789	GCA_001038375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/375/GCA_001038375.1_ASM103837v1	-	DL84A27
Dickeya solani	1089444	PRJNA270489	270489	Proteobacteria	Gammaproteobacteria	4.98557	56.1	-	JWMJ01	37	4436	4264	10/21/15	4/4/17	Contig	CNRS - UPR2355	SAMN03266539	GCA_001401705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/705/GCA_001401705.1_Dsl_1.0	26467299	RNS 05.1.2A
Blautia sp. CAG:237	1262755	PRJEB776	206665	Terrabacteria group	Firmicutes	2.89819	45	-	CBED01	131	2653	2627	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138715	GCA_000436615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/615/GCA_000436615.1_MGS237	-	-
Mucilaginibacter sp. UBA4119	1946961	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.69756	41.4	-	DFXB01	123	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453435	GCA_002381605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/605/GCA_002381605.1_ASM238160v1	28894102	-
Gordonia sp. 852002-50816_SCH5313054-c	1834093	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.11422	65.3	-	LZTE01	90	4680	4489	6/17/16	4/12/17	Contig	JCVI	SAMN04696149	GCA_001665925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/925/GCA_001665925.1_ASM166592v1	-	852002-50816_SCH5313054-c
Massilia sp. BSC265	1549812	PRJNA257892	257892	Proteobacteria	Betaproteobacteria	5.32616	65.4	-	JPXI01	42	4724	4536	8/15/14	4/9/17	Scaffold	Arizona State University	SAMN02979380	GCA_000740675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/675/GCA_000740675.1_ASM74067v1	25395652	BSC265
Pseudomonas protegens	380021	PRJNA356318	356318	Proteobacteria	Gammaproteobacteria	6.98112	63.4	-	MRUB01	9	6377	6250	12/15/16	4/6/17	Scaffold	Centro de Investigacion y de Estudios Avanzados del IPN	SAMN06111858	GCA_001906615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/615/GCA_001906615.1_ASM190661v1	-	PA14
Blastomonas sp. CCH15-G10	1768746	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	4.12433	64.3	-	LSHV01	159	4029	3857	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299418	GCA_001555935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/935/GCA_001555935.1_ASM155593v1	-	CCH15-G10
Streptococcus oralis subsp. tigurinus	1077464	PRJNA304678	304678	Terrabacteria group	Firmicutes	2.09238	40.9	-	NCUD01	47	2092	1972	4/18/17	4/21/17	Scaffold	Slagelse Hospital	SAMN06705631	GCA_002096285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/285/GCA_002096285.1_ASM209628v1	27325438	OD_339823_10
Raoultella ornithinolytica	54291	PRJNA286303	286303	Proteobacteria	Gammaproteobacteria	5.39051	55.9	-	LFBW01	64	5157	4948	6/24/15	4/3/17	Contig	University of Malaya	SAMN03768419	GCA_001039315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/315/GCA_001039315.1_ASM103931v1	-	CB1
Brochothrix thermosphacta	2756	PRJNA338887	338887	Terrabacteria group	Firmicutes	2.4917	36.3	-	MDLV01	22	2392	2300	8/29/16	4/5/17	Scaffold	CSIRO Agriculture and Food; Food Safety and Stability Group	SAMN05567454	GCA_001715665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/665/GCA_001715665.1_ASM171566v1	-	Bth-7809
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.787	58.8	-	LNWK01	68	4586	4447	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339848	GCA_001681415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/415/GCA_001681415.1_ASM168141v1	-	F3480
Curtobacterium sp. MCBA15_003	1898732	PRJNA342146	342146	Terrabacteria group	Actinobacteria	3.63478	71.8	-	MJGJ01	40	3382	3271	11/2/16	4/13/17	Scaffold	Massachusetts Institute of Technology	SAMN05736480	GCA_001864845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/845/GCA_001864845.1_ASM186484v1	-	MCBA15_003
Streptomyces rimosus subsp. rimosus	132474	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.35623	72	-	JOBN01	129	8226	7842	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645394	GCA_000720565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/565/GCA_000720565.1_ASM72056v1	-	NRRL WC-3925
Butyrivibrio sp. NC3005	1280685	PRJNA185727	185727	Terrabacteria group	Firmicutes	3.87145	35.5	-	AUKC01	93	3352	3163	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441481	GCA_000424545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/545/GCA_000424545.1_ASM42454v1	-	NC3005
Ensifer sp. Root1312	1736453	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	7.47361	62.2	-	LMES01	38	7037	6797	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04155722	GCA_001426465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/465/GCA_001426465.1_Root1312	26633631	Root1312
Lysobacter sp. cf310	1761790	PRJEB17428	351642	Proteobacteria	Gammaproteobacteria	4.72933	68.8	-	FOSS01	12	4199	4086	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487938	GCA_900114355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/355/GCA_900114355.1_IMG-taxon_2616644831_annotated_assembly	-	CF310
Leifsonia sp. Leaf336	1736341	PRJNA297956	297956	Terrabacteria group	Actinobacteria	4.15779	69.6	-	LMOZ01	5	4010	3904	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151731	GCA_001423695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/695/GCA_001423695.1_Leaf336	26633631	Leaf336
Sphingopyxis sp. H005	1759064	PRJNA294421	294421	Proteobacteria	Alphaproteobacteria	5.10357	64.7	-	LNRR01	27	4826	4676	12/15/15	4/11/17	Contig	US EPA	SAMN04252877	GCA_001467395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/395/GCA_001467395.1_ASM146739v1	-	H005
Pseudomonas denitrificans (nomen rejiciendum)	43306	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.40874	66.5	-	JVFY01	62	6054	5860	7/10/15	5/30/17	Scaffold	University of Washington	SAMN03197660	GCA_001065055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/055/GCA_001065055.1_ASM106505v1	26230489	466_PDEN
Helicobacter sp. 13S00477-4	1905759	PRJNA344861	344861	Proteobacteria	delta/epsilon subdivisions	1.7764	32.5	-	MLAS01	45	1724	1647	8/28/17	8/30/17	Scaffold	Utrecht University	SAMN05851389	GCA_002272785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/785/GCA_002272785.1_ASM227278v1	28827684	13S00477-4
Faecalibacterium sp. UBA1762	1946505	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.31201	50.9	-	DCHC01	68	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452459	GCA_002314755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/755/GCA_002314755.1_ASM231475v1	28894102	-
Roseburia sp. UNK.MGS-15	1638781	PRJNA277012	277012	Terrabacteria group	Firmicutes	4.89084	42.6	-	LBCG01	208	-	-	4/24/15	6/10/15	Scaffold	The Mayo Clinic	SAMN03456683	GCA_000980625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/625/GCA_000980625.1_ASM98062v1	26021920	-
Salinivibrio sp. ML277	1909463	PRJNA368648	368648	Proteobacteria	Gammaproteobacteria	3.44627	50.4	-	MUEL01	73	3177	3037	2/14/17	2/22/17	Contig	Universidad de Sevilla	SAMN06267752	GCA_001995865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/865/GCA_001995865.1_ASM199586v1	-	ML277
Staphylococcus cohnii subsp. urealyticus	94138	PRJNA354224	354224	Terrabacteria group	Firmicutes	2.81898	32.5	-	MPPU01	67	2751	2604	12/9/16	4/6/17	Contig	Federation University Australia	SAMN06043532	GCA_001896245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/245/GCA_001896245.1_ASM189624v1	-	SW120
Chlamydia trachomatis	813	PRJNA316787	316787	PVC group	Chlamydiae	1.05023	41.2636	chromosome:NZ_CP015306.1/CP015306.1; plasmid CtrF-6068_plasmid:NZ_CP015307.1/CP015307.1	-	2	973	910	6/3/16	4/10/17	Complete Genome	CHI: Chlamydien-Wirtszell-Interaktion	SAMN04590091	GCA_001655575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/575/GCA_001655575.1_ASM165557v1	-	F-6068
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.18062	34.3	-	LZHI01	68	1947	1831	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179610	GCA_001690385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/385/GCA_001690385.1_ASM169038v1	-	Choc6-1
Lysinibacillus sp. LD79	1500268	PRJEB15842	347797	Terrabacteria group	Firmicutes	4.77512	37.3	-	FMVP01	46	4743	4522	10/17/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02787081	GCA_900102355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/355/GCA_900102355.1_IMG-taxon_2585428096_annotated_assembly	-	LD79
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.07501	42.1	-	FTPV01	1	966	904	3/18/17	3/24/17	Contig	Functional Genomics Genter Zurich	SAMEA4555925	GCA_900149465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/465/GCA_900149465.1_3-25b	-	-
Lactobacillus kunkeei	148814	PRJNA270969	270969	Terrabacteria group	Firmicutes	1.49002	37.3	-	JXDA01	8	1403	1331	9/11/15	4/4/17	Contig	Uppsala university	SAMN03275718	GCA_001281285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/285/GCA_001281285.1_ASM128128v1	25953738	LAni
Devosia sp. Leaf64	1736229	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.25253	60.5	-	LMLO01	24	4109	3998	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151609	GCA_001421945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/945/GCA_001421945.1_Leaf64	26633631	Leaf64
Bosea sp. DSM 18164	1881058	PRJEB17146	351384	Proteobacteria	Alphaproteobacteria	6.33814	66.6	-	FOKP01	73	6177	5991	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428997	GCA_900112185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/185/GCA_900112185.1_IMG-taxon_2675903224_annotated_assembly	-	DSM 18164
Vibrio metoecus	1481663	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.914	46.8	-	NMSH01	104	3646	3466	8/31/17	9/2/17	Scaffold	University of Alberta	SAMN07350501	GCA_002283855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/855/GCA_002283855.1_ASM228385v1	-	OYP9E10
Alteromonas australica	589873	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.11323	44.5	-	DGLQ01	133	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453828	GCA_002393315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/315/GCA_002393315.1_ASM239331v1	28894102	-
Sulfuricurvum sp. 17-40-25	1970439	PRJNA379596	379596	Proteobacteria	delta/epsilon subdivisions	2.31533	40	-	NCIJ01	50	2465	2391	8/16/17	8/16/17	Scaffold	None	SAMN06622245	GCA_002282015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/015/GCA_002282015.1_ASM228201v1	-	-
Klebsiella michiganensis	1134687	PRJNA209576	209576	Proteobacteria	Gammaproteobacteria	5.76208	55.9	-	ATNG01	72	5554	5336	7/12/13	2/21/17	Contig	"Institute of Biotechnology, Zhejiang University"	SAMN02213857	GCA_000427015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/015/GCA_000427015.1_kleoxysa2	23950120	SA2
Achromobacter sp. KCJK1724	1848159	PRJNA319130	319130	Proteobacteria	Betaproteobacteria	6.65947	65	-	LYQJ01	119	6186	6025	8/18/16	4/13/17	Contig	University of Florida	SAMN04961002	GCA_001707465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/465/GCA_001707465.1_ASM170746v1	-	KCJK1724
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	7.09454	44.1	-	MPTI01	108	6232	6068	1/18/17	4/6/17	Contig	Cornell University	SAMN05772533	GCA_001954515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/515/GCA_001954515.1_ASM195451v1	-	FSL H8-0175
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.41512	50.9	-	MPRB01	65	2355	2252	3/6/17	3/9/17	Contig	Harvard University	SAMN06016275	GCA_002020845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/845/GCA_002020845.1_ASM202084v1	-	-
Enterobacter ludwigii	299767	PRJEB8251	278950	Proteobacteria	Gammaproteobacteria	5.22011	54.6	-	CEFO01	36	4857	4639	3/20/15	4/10/17	Scaffold	FONDAZIONE EDMUND MACH	SAMEA3213010	GCA_900068835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/068/835/GCA_900068835.1_EnVs6.FASTA	-	EnVs6
Mycobacterium immunogenum	83262	PRJNA294421	294421	Terrabacteria group	Actinobacteria	5.97587	64.1	-	LJFY01	89	6071	5806	9/22/15	4/4/17	Contig	US EPA	SAMN04025502	GCA_001296425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/425/GCA_001296425.1_ASM129642v1	26744376	HXXI
Moritella viscosa	80854	PRJEB16014	348508	Proteobacteria	Gammaproteobacteria	5.0729	39.2	-	FRDU01	179	4566	4301	12/6/16	4/11/17	Contig	UNIVERSITY OF TROMSO	SAMEA4520413	GCA_900120305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/305/GCA_900120305.1_clc.v6.5.Vvi-7.01	-	-
Staphylococcus argenteus	985002	PRJNA317282	317282	Terrabacteria group	Firmicutes	2.87114	32.4	-	LWAR01	110	2909	2695	1/23/17	4/6/17	Contig	Shanghai Jiao Tong University	SAMN04604746	GCA_001969725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/725/GCA_001969725.1_ASM196972v1	-	SJTU F21285
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.09131	58	-	JVVC01	174	4975	4758	7/10/15	2/21/17	Contig	University of Washington	SAMN03197266	GCA_001060825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/825/GCA_001060825.1_ASM106082v1	26230489	1294_KPNE
Lactobacillus acetotolerans	1600	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.19854	34.4	-	DHDC01	133	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455181	GCA_002399125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/125/GCA_002399125.1_ASM239912v1	28894102	-
Mycobacterium chimaera	222805	PRJNA324238	324238	Terrabacteria group	Actinobacteria	6.45453	67.6	-	MNAM01	15	6061	5751	1/6/17	4/16/17	Contig	Oxford University	SAMN05918811	GCA_001938095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/095/GCA_001938095.1_ASM193809v1	-	JCM_14737
Duganella sp. Ant L27C-9	1707783	PRJNA294201	294201	Proteobacteria	Betaproteobacteria	3.05979	63	-	LIZH01	1805	-	-	10/28/15	10/28/15	Contig	University of Alabama at Birmingham	SAMN04017852	GCA_001418785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/785/GCA_001418785.1_ASM141878v1	-	Ant L27C-9
Lactobacillus parabuchneri	152331	PRJNA357007	357007	Terrabacteria group	Firmicutes	2.70633	43.3	-	MSAZ01	60	2626	2476	4/18/17	4/21/17	Scaffold	University of Bern	SAMN06130980	GCA_002095695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/695/GCA_002095695.1_ASM209569v1	28261177	FAM23165
Lactobacillus taiwanensis	508451	PRJNA384810	384810	Terrabacteria group	Firmicutes	1.89072	34.1	-	NGOL01	70	1851	1663	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848419	GCA_002253365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/365/GCA_002253365.1_ASM225336v1	-	114e
Lactobacillus aviarius	1606	PRJNA316009	316009	Terrabacteria group	Firmicutes	1.6313	40.2	-	LWUC01	62	1561	1473	6/2/16	4/5/17	Scaffold	University of Minnesota	SAMN04573030	GCA_001654565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/654/565/GCA_001654565.1_ASM165456v1	-	UMNLAv10
Bacillus paralicheniformis	1648923	PRJNA360027	360027	Terrabacteria group	Firmicutes	4.37004	45.9	-	MSZY01	45	4517	3101	1/23/17	1/23/17	Contig	Madurai kamaraj university	SAMN06204646	GCA_001969565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/565/GCA_001969565.1_ASM196956v1	-	MKU3
Nitrospira sp. UBA667	1946994	PRJNA348753	348753	Nitrospirae	Nitrospira	2.8716	59	-	DBNR01	376	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457817	GCA_002299405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/405/GCA_002299405.1_ASM229940v1	28894102	-
Enterobacter kobei	208224	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.95299	55	-	LEEK01	108	4867	4617	6/9/15	4/3/17	Contig	JCVI	SAMN03732692	GCA_001023235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/235/GCA_001023235.1_ASM102323v1	-	GN02275
Chlamydia trachomatis	813	PRJNA234355	234355	PVC group	Chlamydiae	1.05054	41.2636	chromosome:NZ_CP010567.1/CP010567.1; plasmid unnamed:NZ_CP010568.1/CP010568.1	-	2	973	908	7/21/15	3/26/17	Complete Genome	"National Institute of Health, Portugal"	SAMN03290707	GCA_001183805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/805/GCA_001183805.1_ASM118380v1	26207372	E/CS1025/11
Enterobacter xiangfangensis	1296536	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	4.85722	55.2	-	NDFA01	51	4808	4570	5/31/17	8/4/17	Contig	JCVI	SAMN06218067	GCA_002161915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/915/GCA_002161915.1_ASM216191v1	-	41948
Halothiobacillus sp. 15-55-196	1970382	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	2.29713	55.4	-	NCKC01	146	2250	2132	8/16/17	8/16/17	Scaffold	None	SAMN06622200	GCA_002282715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/715/GCA_002282715.1_ASM228271v1	-	-
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.67153	66.8	-	LPBT01	82	6152	5890	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449382	GCA_001526805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/805/GCA_001526805.1_ASM152680v1	-	MSMB1914WGS
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.57713	67.7	-	LOZT01	94	6908	6549	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449329	GCA_001527665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/665/GCA_001527665.1_ASM152766v1	-	MSMB1135
Syntrophomonas sp. UBA1376	1947616	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.31752	46.4	-	DBRE01	126	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452614	GCA_002305535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/535/GCA_002305535.1_ASM230553v1	28894102	-
Candidatus Kryptonium thompsoni	1633631	PRJEB11717	301866	FCB group	Candidatus Kryptonia	1.52906	37.2	-	CZVQ01	220	1644	1612	11/11/15	1/13/16	Scaffold	DOE - Joint Genome Institute	SAMN03436092	GCA_001536045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/045/GCA_001536045.1_JGI_assembly	-	JGI-16
Enterobacter cloacae complex 'Hoffmann cluster IV'	1812935	PRJNA329460	329460	Proteobacteria	Gammaproteobacteria	5.63967	55.1	-	MBMT01	168	5707	5401	11/1/16	4/20/17	Contig	University of Malaya	SAMN05413078	GCA_001858285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/285/GCA_001858285.1_ASM185828v1	-	R2A
Enterobacter cloacae complex 'Hoffmann cluster III'	1812934	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.45	55.4	-	JVNW01	208	4278	4063	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197454	GCA_001056175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/175/GCA_001056175.1_ASM105617v1	26230489	261_ECLO
Polynucleobacter sp. 24-46-87	1970423	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	4.73057	45.8	-	NCHT01	1576	5576	5251	8/16/17	8/16/17	Scaffold	None	SAMN06622261	GCA_002257215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/215/GCA_002257215.1_ASM225721v1	-	-
Oleiphilus sp. HI0132	1822270	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	5.17024	44.5	-	LWGJ01	1901	4883	4183	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580809	GCA_001635845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/845/GCA_001635845.1_ASM163584v1	-	HI0132
Thalassolituus sp. UBA2107	1947659	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.25432	51.2	-	DCYP01	211	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450589	GCA_002331105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/105/GCA_002331105.1_ASM233110v1	28894102	-
Eikenella sp. NML99-0057	1795834	PRJNA310649	310649	Proteobacteria	Betaproteobacteria	1.94339	55.5	-	LXST01	14	1951	1781	5/19/16	4/12/17	Contig	Public Health Agency of Canada	SAMN04931644	GCA_001648535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/535/GCA_001648535.1_ASM164853v1	-	NML99-0057
Lachnoclostridium sp. UBA903	1946709	PRJNA348753	348753	Terrabacteria group	Firmicutes	5.8621	40.7	-	DBEP01	127	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453946	GCA_002294045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/045/GCA_002294045.1_ASM229404v1	28894102	-
Gilliamella sp. A-TSA4	1970469	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.46097	34.8	-	NASR01	86	2234	2149	5/16/17	5/24/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603542	GCA_002142135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/135/GCA_002142135.1_ASM214213v1	-	A-TSA4
Lachnospira sp. UBA4285	1946720	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.33977	55.6	-	DGVL01	179	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456458	GCA_002394965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/965/GCA_002394965.1_ASM239496v1	28894102	-
uncultured Flavonifractor sp.	1193534	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.81597	57.1	-	FMGH01	50	3966	3906	8/16/16	8/16/16	Scaffold	SC	SAMEA3545394	GCA_900066825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/825/GCA_900066825.1_14207_7_54	-	-
Thiobacillus sp. 63-78	1895859	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	3.21335	63.2	-	MKWM01	74	3208	3096	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660633	GCA_001899765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/765/GCA_001899765.1_ASM189976v1	-	-
Bradyrhizobium canariense	255045	PRJNA355158	355158	Proteobacteria	Alphaproteobacteria	8.36786	63	-	NAFJ01	159	8003	7463	4/24/17	8/7/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN06064765	GCA_002108905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/905/GCA_002108905.1_ASM210890v1	28729275	UBMA510
Aminobacterium sp. UBA4834	1946022	PRJNA348753	348753	Synergistetes	Synergistia	2.06923	43.6	-	DHFC01	20	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453836	GCA_002400205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/205/GCA_002400205.1_ASM240020v1	28894102	-
Fibrobacter sp. UWCM	1896208	PRJEB18225	355489	FCB group	Fibrobacteres	3.78417	53.4	-	FQWR01	65	3176	3037	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05720761	GCA_900129735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/735/GCA_900129735.1_IMG-taxon_2700988689_annotated_assembly	-	UWCM
Archaeoglobus sp. JdFR-25	1934982	PRJNA269163	269163	Euryarchaeota	Archaeoglobi	0.885114	40	-	MTMM01	31	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226342	GCA_002011195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/195/GCA_002011195.1_ASM201119v1	28350381	-
Aequorivita sp. UBA3995	1947776	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.19533	38.2	-	DGBV01	99	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456489	GCA_002384895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/895/GCA_002384895.1_ASM238489v1	28894102	-
Xanthomonas axonopodis pv. manihotis str. AFNC1360	1189618	PRJNA165205	165205	Proteobacteria	Gammaproteobacteria	4.92108	65.1	-	AKCW01	149	4396	4079	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090301	GCA_000265785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/785/GCA_000265785.1_AFNC1360	22699502	AFNC1360
Catabacter sp. UBA1252	1946240	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.47414	50.9	-	DBVY01	61	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06456126	GCA_002308575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/575/GCA_002308575.1_ASM230857v1	28894102	-
Candidatus Microthrix sp. UBA1323	1946155	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.88319	43.2	-	DBTF01	214	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06453711	GCA_002306895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/895/GCA_002306895.1_ASM230689v1	28894102	-
Kandleria sp. UBA3840	1946665	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.6991	37.1	-	DGHU01	223	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453329	GCA_002392775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/775/GCA_002392775.1_ASM239277v1	28894102	-
Mageeibacillus sp. UBA4314	1946787	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.26423	47.9	-	DGUI01	56	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453091	GCA_002394605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/605/GCA_002394605.1_ASM239460v1	28894102	-
Mageeibacillus sp. UBA4923	1946789	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.36904	50.7	-	DHBR01	125	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457720	GCA_002397945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/945/GCA_002397945.1_ASM239794v1	28894102	-
Kandleria sp. UBA4329	1946669	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.53734	39.6	-	DGTT01	108	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453640	GCA_002393785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/785/GCA_002393785.1_ASM239378v1	28894102	-
Candidatus Microthrix sp. UBA1322	1946154	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.15536	52	-	DBTG01	131	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06453712	GCA_002306935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/935/GCA_002306935.1_ASM230693v1	28894102	-
Catabacter sp. UBA1259	1946241	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.22267	46.2	-	DBVR01	52	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457797	GCA_002308755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/755/GCA_002308755.1_ASM230875v1	28894102	-
Xanthomonas axonopodis pv. manihotis str. CFBP1851	1189617	PRJNA165203	165203	Proteobacteria	Gammaproteobacteria	4.79844	65.2	-	AKCY01	123	4240	3917	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090303	GCA_000265805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/805/GCA_000265805.1_CFBP1851	22699502	CFBP1851
Archaeoglobus sp. JdFR-24	1934981	PRJNA269163	269163	Euryarchaeota	Archaeoglobi	2.70174	39.5	-	MTML01	154	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226341	GCA_002011215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/215/GCA_002011215.1_ASM201121v1	28350381	-
Fibrobacter sp. UWH4	1896210	PRJEB18357	355815	FCB group	Fibrobacteres	3.69602	50.8	-	FRAY01	22	3117	2976	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05720762	GCA_900142475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/475/GCA_900142475.1_IMG-taxon_2700988680_annotated_assembly	-	UWH4
Bradyrhizobium canariense	255045	PRJNA355583	355583	Proteobacteria	Alphaproteobacteria	8.29968	63	-	NAFE01	227	7848	7368	4/24/17	8/7/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN06077202	GCA_002108965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/965/GCA_002108965.1_ASM210896v1	28729275	UBMA181
Thiobacillus sp. 65-29	1895862	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	2.89622	65.4	-	MKWN01	61	2852	2752	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660634	GCA_001899775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/775/GCA_001899775.1_ASM189977v1	-	-
uncultured Flavonifractor sp.	1193534	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.92985	59.3	-	FMGI01	47	3650	3593	8/16/16	8/16/16	Scaffold	SC	SAMEA3545396	GCA_900066835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/835/GCA_900066835.1_14207_7_56	-	-
Lachnospira sp. UBA4290	1946721	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.38332	37.4	-	DGVG01	177	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452660	GCA_002395885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/885/GCA_002395885.1_ASM239588v1	28894102	-
Gilliamella sp. NO3	1970738	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.52386	34.7	-	NASD01	54	2284	2201	5/16/17	5/24/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603536	GCA_002142155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/155/GCA_002142155.1_ASM214215v1	-	NO3
Lachnoclostridium sp. UBA739	1946707	PRJNA348753	348753	Terrabacteria group	Firmicutes	4.29663	35.8	-	DBKX01	439	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453421	GCA_002297865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/865/GCA_002297865.1_ASM229786v1	28894102	-
Thalassolituus sp. UBA2009	1947658	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.36941	52.3	-	DDCJ01	167	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454197	GCA_002335285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/285/GCA_002335285.1_ASM233528v1	28894102	-
Oleiphilus sp. HI0072	1822247	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	4.92154	44.3	-	LWFM01	2192	4625	3712	5/2/16	5/2/16	Contig	Massachusetts Institute of Technology	SAMN04580786	GCA_001634975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/975/GCA_001634975.1_ASM163497v1	-	HI0072
Polynucleobacter sp. 32-46-5	1970424	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	1.1029	45.9	-	NCDJ01	501	1431	1289	8/16/17	8/16/17	Scaffold	None	SAMN06622375	GCA_002280125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/125/GCA_002280125.1_ASM228012v1	-	-
Enterobacter cloacae complex 'Hoffmann cluster IV'	1812935	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.31685	55.3	-	NDIV01	194	5364	5042	5/31/17	6/2/17	Contig	JCVI	SAMN06218064	GCA_002162415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/415/GCA_002162415.1_ASM216241v1	-	41952
Candidatus Kryptonium thompsoni	1633631	PRJEB11728	301877	FCB group	Candidatus Kryptonia	2.00058	37.3	-	CZVY01	180	2053	2009	11/11/15	1/13/16	Scaffold	DOE - Joint Genome Institute	SAMN03435927	GCA_001536125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/125/GCA_001536125.1_JGI_assembly	-	JGI-9
Syntrophomonas sp. UBA1368	1947615	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.00424	44.6	-	DBRM01	86	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06456410	GCA_002305965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/965/GCA_002305965.1_ASM230596v1	28894102	-
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.68753	67.6	-	LOZV01	78	7004	6642	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449331	GCA_001527725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/725/GCA_001527725.1_ASM152772v1	-	MSMB1967
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.68377	66.7	-	LOYT01	53	6167	5886	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449303	GCA_001527205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/205/GCA_001527205.1_ASM152720v1	-	MSMB1842
Halothiobacillus sp. 14-56-357	1970381	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	2.08868	55.5	-	NCKL01	208	2102	1962	8/16/17	8/16/17	Scaffold	None	SAMN06622191	GCA_002282755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/755/GCA_002282755.1_ASM228275v1	-	-
Enterobacter xiangfangensis	1296536	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.04058	55.1	-	NDFC01	73	5048	4787	5/31/17	8/4/17	Contig	JCVI	SAMN06218072	GCA_002161935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/935/GCA_002161935.1_ASM216193v1	-	40884
Chlamydia trachomatis	813	PRJNA234355	234355	PVC group	Chlamydiae	1.05055	41.2636	chromosome:NZ_CP010569.1/CP010569.1; plasmid unnamed:NZ_CP010570.1/CP010570.1	-	2	972	906	7/21/15	3/26/17	Complete Genome	"National Institute of Health, Portugal"	SAMN03290797	GCA_001183825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/825/GCA_001183825.1_ASM118382v1	26207372	F/CS847/08
Enterobacter kobei	208224	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.95422	55.1	-	LEEL01	47	4847	4641	6/9/15	4/3/17	Contig	JCVI	SAMN03732691	GCA_001023295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/295/GCA_001023295.1_ASM102329v1	-	GN02266
Nitrospira sp. UBA2082	1946986	PRJNA348753	348753	Nitrospirae	Nitrospira	3.5638	57.7	-	DCZO01	37	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457483	GCA_002331335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/335/GCA_002331335.1_ASM233133v1	28894102	-
Lactobacillus aviarius	1606	PRJNA316009	316009	Terrabacteria group	Firmicutes	1.62772	40.2	-	LWUF01	60	1573	1470	6/2/16	4/5/17	Scaffold	University of Minnesota	SAMN04573033	GCA_001654655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/654/655/GCA_001654655.1_ASM165465v1	-	UMNLAv13
Lactobacillus taiwanensis	508451	PRJNA384810	384810	Terrabacteria group	Firmicutes	1.97947	34.2	-	NGOO01	59	1948	1749	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848416	GCA_002253375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/375/GCA_002253375.1_ASM225337v1	-	111u
Lactobacillus parabuchneri	152331	PRJNA357007	357007	Terrabacteria group	Firmicutes	2.56664	43.5	-	MSBC01	36	2432	2281	4/18/17	4/21/17	Scaffold	University of Bern	SAMN06130983	GCA_002095715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/715/GCA_002095715.1_ASM209571v1	28261177	FAM23168
Mycobacterium chimaera	222805	PRJNA299467	299467	Terrabacteria group	Actinobacteria	6.08688	67.7	-	LQOO01	108	5743	5482	4/20/17	4/22/17	Contig	University of Trento	SAMN04216918	GCA_002101575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/575/GCA_002101575.1_ASM210157v1	-	DSM 44623
Lactobacillus acetotolerans	1600	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.22112	35	-	DHDN01	133	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454289	GCA_002399375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/375/GCA_002399375.1_ASM239937v1	28894102	-
Klebsiella quasipneumoniae subsp. quasipneumoniae	1667327	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.42194	57.8	-	JUQB01	248	5343	5092	7/10/15	2/21/17	Contig	University of Washington	SAMN03198073	GCA_001067585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/585/GCA_001067585.1_ASM106758v1	26230489	865_KPNE
Staphylococcus argenteus	985002	PRJNA302939	302939	Terrabacteria group	Firmicutes	2.73158	32.3	-	LYLU01	25	2702	2513	7/20/17	7/22/17	Contig	NHGRI	SAMN04286974	GCA_002221825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/825/GCA_002221825.1_ASM222182v1	-	ABFQM
Mycobacterium immunogenum	83262	PRJNA323571	323571	Terrabacteria group	Actinobacteria	5.54277	64.3	-	MAFP01	22	5501	5355	3/3/17	3/6/17	Contig	LNCC	SAMN05186796	GCA_002013555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/555/GCA_002013555.1_ASM201355v1	-	MC 779
Enterobacter ludwigii	299767	PRJEB8253	278829	Proteobacteria	Gammaproteobacteria	5.07979	54	-	CEFQ01	102	4710	4554	3/20/15	4/5/17	Scaffold	FONDAZIONE EDMUND MACH	SAMEA3213011	GCA_900068845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/068/845/GCA_900068845.1_EnVs2.FASTA	-	EnVs2
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.69491	50.9	-	MPRO01	65	2626	2532	3/6/17	3/9/17	Contig	Harvard University	SAMN06016286	GCA_002020915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/915/GCA_002020915.1_ASM202091v1	-	-
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	6.87759	44.1	-	MPTJ01	102	6098	5955	1/18/17	4/6/17	Contig	Cornell University	SAMN05772532	GCA_001954535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/535/GCA_001954535.1_ASM195453v1	-	FSL F4-0134
Achromobacter sp. HZ34	2015170	PRJNA391527	391527	Proteobacteria	Betaproteobacteria	7.04936	64.8	-	NJIX01	21	6138	5989	6/27/17	6/29/17	Contig	Northwest A&F University	SAMN07270270	GCA_002209485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/485/GCA_002209485.1_ASM220948v1	-	HZ34
Klebsiella michiganensis H1g	1416754	PRJNA226202	226202	Proteobacteria	Gammaproteobacteria	5.84092	56	-	AYMI01	68	5583	5368	4/18/14	2/21/17	Contig	University of Malaya	SAMN02729846	GCA_000633235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/235/GCA_000633235.1_de_novo	-	H1g
Sulfuricurvum sp. UBA2173	1947585	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.01346	53.5	-	DCWB01	15	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455570	GCA_002327465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/465/GCA_002327465.1_ASM232746v1	28894102	-
Vibrio metoecus	1481663	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.95043	46.8	-	NMSI01	82	3729	3538	8/31/17	9/2/17	Scaffold	University of Alberta	SAMN07350500	GCA_002283895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/895/GCA_002283895.1_ASM228389v1	-	OYP9E03
Bosea sp. TND4EK4	1907408	PRJEB18856	360734	Proteobacteria	Alphaproteobacteria	4.71831	67	-	FTMO01	60	4420	4280	1/14/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05880592	GCA_900156025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/025/GCA_900156025.1_IMG-taxon_2708742414_annotated_assembly	-	TND4EK4
Devosia sp. Leaf420	1736374	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.2196	60.7	-	LMQU01	16	4060	3947	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151764	GCA_001425445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/445/GCA_001425445.1_Leaf420	26633631	Leaf420
Lactobacillus kunkeei	148814	PRJNA270972	270972	Terrabacteria group	Firmicutes	1.47874	36.5	-	JXDE01	18	1388	1318	10/8/15	4/4/17	Contig	Uppsala university	SAMN03277035	GCA_001308185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/308/185/GCA_001308185.1_ASM130818v1	25953738	LMbe
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.08093	41.6	-	FTQJ01	1	968	906	3/18/17	3/24/17	Contig	Functional Genomics Genter Zurich	SAMEA4555928	GCA_900149495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/495/GCA_900149495.1_10-26b	-	-
Lysinibacillus sp. BC-14	1500267	PRJEB16223	348987	Terrabacteria group	Firmicutes	4.71864	37.4	-	FMYD01	36	4643	4436	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02787070	GCA_900104275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/275/GCA_900104275.1_IMG-taxon_2585428105_annotated_assembly	-	BC-14
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.35976	34.6	-	LZHK01	141	2325	2092	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179612	GCA_001690415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/415/GCA_001690415.1_ASM169041v1	-	Imp1-1
Chlamydia trachomatis C/TW-3	1431547	PRJNA230246	230246	PVC group	Chlamydiae	1.05106	41.2636	chromosome:NC_023060.1/CP006945.1; plasmid unnamed:NC_023057.1/CP006946.1	-	2	978	906	12/13/13	3/24/17	Complete Genome	"National Institute of Health, Portugal"	SAMN02641532	GCA_000507225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/507/225/GCA_000507225.1_ASM50722v1	24459269	C/TW-3
Staphylococcus cohnii subsp. cohnii	74704	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.67765	32.5	-	FMPF01	28	2557	2445	9/30/16	4/5/17	Scaffold	SC	SAMEA3109313	GCA_900097955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/955/GCA_900097955.1_15056_7_47	-	073AN
Salinivibrio sp. IB560	1909443	PRJNA368649	368649	Proteobacteria	Gammaproteobacteria	3.49233	50.5	-	MUEM01	65	3244	3075	2/14/17	2/22/17	Contig	Universidad de Sevilla	SAMN06268039	GCA_001995915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/915/GCA_001995915.1_ASM199591v1	-	IB560
Roseburia sp. 40_7	1897015	PRJNA321218	321218	Terrabacteria group	Firmicutes	2.25201	40.7	-	MNTH01	365	2387	1597	12/23/16	12/23/16	Scaffold	None	SAMN05717291	GCA_001916875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/875/GCA_001916875.1_ASM191687v1	27819664	-
Faecalibacterium sp. UBA1819	1946507	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.25495	50.7	-	DCEX01	36	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453774	GCA_002315015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/015/GCA_002315015.1_ASM231501v1	28894102	-
Helicobacter sp. 13S00482-2	1476200	PRJNA344861	344861	Proteobacteria	delta/epsilon subdivisions	1.90849	33.5	-	MLAT01	108	1817	1713	8/28/17	8/30/17	Scaffold	Utrecht University	SAMN05851432	GCA_002272795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/795/GCA_002272795.1_ASM227279v1	28827684	13S00482-2
Pseudomonas denitrificans (nomen rejiciendum)	43306	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.96284	66	-	JVFK01	103	6654	6349	7/10/15	5/24/17	Scaffold	University of Washington	SAMN03197674	GCA_001065155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/155/GCA_001065155.1_ASM106515v1	26230489	481.rep1_PDEN
Sphingopyxis sp. H038	1759066	PRJNA294421	294421	Proteobacteria	Alphaproteobacteria	5.05814	64.7	-	LNRT01	34	4788	4641	12/15/15	4/11/17	Contig	US EPA	SAMN04252879	GCA_001467405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/405/GCA_001467405.1_ASM146740v1	-	H038
Leifsonia sp. Root4	1736525	PRJNA297942	297942	Terrabacteria group	Actinobacteria	3.86736	67.7	-	LMDN01	7	3553	3459	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04155794	GCA_001425085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/085/GCA_001425085.1_Root4	26633631	Root4
Ensifer sp. Root74	1736597	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	7.48034	62.2	-	LMII01	42	7042	6780	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04155866	GCA_001429125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/125/GCA_001429125.1_Root74	26633631	Root74
Butyrivibrio sp. MC2013	1280686	PRJNA185729	185729	Terrabacteria group	Firmicutes	3.81307	44	-	AUKE01	48	3224	3074	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441163	GCA_000424585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/585/GCA_000424585.1_ASM42458v1	-	MC2013
Streptomyces rimosus subsp. rimosus	132474	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.13931	71.9	-	JOBO01	111	7018	6697	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645395	GCA_000720595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/595/GCA_000720595.1_ASM72059v1	-	NRRL WC-3927
Curtobacterium sp. MCBA15_005	1898734	PRJNA342146	342146	Terrabacteria group	Actinobacteria	3.77224	70.5	-	MJGL01	91	3482	3343	11/2/16	4/13/17	Scaffold	Massachusetts Institute of Technology	SAMN05736482	GCA_001864855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/855/GCA_001864855.1_ASM186485v1	-	MCBA15_005
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.78814	58.8	-	LNWL01	75	4591	4439	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339846	GCA_001681445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/445/GCA_001681445.1_ASM168144v1	-	F3269
Brochothrix thermosphacta	2756	PRJNA338887	338887	Terrabacteria group	Firmicutes	2.61393	36.3	-	MDLU01	56	2518	2425	8/29/16	4/5/17	Scaffold	CSIRO Agriculture and Food; Food Safety and Stability Group	SAMN05567450	GCA_001715835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/835/GCA_001715835.1_ASM171583v1	-	Bth-7804
Raoultella ornithinolytica B6	1286170	PRJEB9264	282799	Proteobacteria	Gammaproteobacteria	5.62286	55.7	-	CVRH01	38	5417	5159	5/27/15	4/3/17	Contig	URMITE	SAMEA3367608	GCA_001049875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/875/GCA_001049875.1_Raoultella_ornithinolytica	-	CMUL058
Streptococcus oralis subsp. tigurinus	1077464	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.93484	41.1	-	NCUB01	9	1920	1803	4/18/17	4/21/17	Scaffold	Slagelse Hospital	SAMN06705633	GCA_002096295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/295/GCA_002096295.1_ASM209629v1	27325438	RH_48720_11
Blastomonas sp. CCH5-E3	1768750	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	4.14116	64.4	-	LSHY01	192	4051	3881	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299422	GCA_001555955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/955/GCA_001555955.1_ASM155595v1	-	CCH5-E3
Pseudomonas protegens	380021	PRJNA356314	356314	Proteobacteria	Gammaproteobacteria	6.97352	63.4	-	MRTZ01	19	6372	6220	12/15/16	4/6/17	Scaffold	Centro de Investigacion y de Estudios Avanzados del IPN	SAMN06111856	GCA_001906625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/625/GCA_001906625.1_ASM190662v1	-	PA11
Massilia sp. KIM	1955422	PRJNA373823	373823	Proteobacteria	Betaproteobacteria	5.73489	67.1	-	MVAD01	17	5050	4919	2/27/17	3/2/17	Scaffold	"Centre for Microbial Ecology and Genomics, University of Pretoria,"	SAMN06315041	GCA_002007115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/115/GCA_002007115.1_ASM200711v1	-	KIM
Gordonia sp. UCD-TK1	1857893	PRJNA324604	324604	Terrabacteria group	Actinobacteria	5.46489	67.8	-	LZMP01	97	5020	4770	7/21/16	4/13/17	Contig	UC Davis	SAMN05210724	GCA_001691435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/435/GCA_001691435.1_ASM169143v1	-	UCD-TK1
Blautia sp. CAG:37	1262757	PRJEB854	206712	Terrabacteria group	Firmicutes	2.66969	48.6	-	CBJJ01	180	2379	2354	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138798	GCA_000438275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/275/GCA_000438275.1_MGS37	-	-
Dickeya solani	1089444	PRJNA270491	270491	Proteobacteria	Gammaproteobacteria	4.9104	56.2852	plasmid unnamed:NZ_CM003649.1/CM003649.1	JWLS01	25	4320	4142	10/21/15	4/5/17	Scaffold	CNRS - UPR2355	SAMN03266541	GCA_001506125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/125/GCA_001506125.1_ASM150612v1	26467299	PPO 9019
Pluralibacter gergoviae	61647	PRJNA285085	285085	Proteobacteria	Gammaproteobacteria	5.47881	59	-	LDZL01	89	5275	4969	6/23/15	4/3/17	Scaffold	UCSF	SAMN03737876	GCA_001038385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/385/GCA_001038385.1_ASM103838v1	-	SF84F43
Chryseobacterium indologenes	253	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.72581	36.5	-	DGGF01	20	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453887	GCA_002392055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/055/GCA_002392055.1_ASM239205v1	28894102	-
Elizabethkingia meningoseptica	238	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	4.02971	36.4	-	MAHF01	20	3641	3557	3/8/17	3/11/17	Contig	CDC	SAMN05256158	GCA_002023505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/505/GCA_002023505.1_ASM202350v1	-	CSID_3000516535
Aeromonas sp. A35_P	1983805	PRJNA361511	361511	Proteobacteria	Gammaproteobacteria	4.60979	62	-	NEVB01	264	4509	4007	8/18/17	8/21/17	Scaffold	Instituto de ecologia	SAMN06882318	GCA_002259925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/925/GCA_002259925.1_ASM225992v1	-	A35_P
Mycobacterium fortuitum	1766	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.35245	66.2	-	LZKO01	188	6189	5906	6/17/16	4/5/17	Contig	JCVI	SAMN04634202	GCA_001672845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/845/GCA_001672845.1_ASM167284v1	-	E3337
Halorubrum sp. J07HR59	1238428	PRJNA176230	176230	Euryarchaeota	Halobacteria	2.1208	56.7	-	ARQB01	7	1862	1833	6/26/13	9/4/13	Scaffold	"University of California, San Diego, Scripps Institution of Oceanography"	SAMN01940911	GCA_000416045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/045/GCA_000416045.1_HR_032012	23637883	-
Hyphomonas sp. UBA1472	1946613	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.35296	58.2	-	DCSG01	28	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453298	GCA_002325505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/505/GCA_002325505.1_ASM232550v1	28894102	-
Thioclava sp. UBA3469	1947693	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.96762	63.1	-	DFRG01	283	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452978	GCA_002378135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/135/GCA_002378135.1_ASM237813v1	28894102	-
Cupriavidus sp. IDO	1539142	PRJNA269997	269997	Proteobacteria	Betaproteobacteria	7.9266	64.6	-	JWMA01	206	7433	6970	12/31/14	4/10/17	Contig	Dalian University of Technology	SAMN03261525	GCA_000812465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/465/GCA_000812465.1_ASM81246v1	25767238	IDO
Microbacterium sp. UNC423CL45Tsu	1340436	PRJNA205976	205976	Terrabacteria group	Actinobacteria	3.10867	70.9	-	JIBF01	17	2977	2853	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743951	GCA_000620445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/445/GCA_000620445.1_ASM62044v1	-	UNC423CL45Tsu
Snodgrassella alvi	1196083	PRJNA339423	339423	Proteobacteria	Betaproteobacteria	2.42123	41.2	-	NAHM01	73	2169	2060	4/13/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603568	GCA_002088595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/595/GCA_002088595.1_ASM208859v1	-	N-S2
Xanthomonas translucens pv. graminis	134874	PRJEB10859	357901	Proteobacteria	Gammaproteobacteria	4.1405	68.8	-	FLTU01	302	3525	3252	12/16/16	4/6/17	Contig	CEBITEC	SAMEA4063034	GCA_900092365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/365/GCA_900092365.1_Xtg9	-	-
Vibrio crassostreae ZF-91	1191303	PRJNA167009	167009	Proteobacteria	Gammaproteobacteria	5.05641	44.5	-	AJZC02	296	4526	4280	6/25/12	4/5/17	Scaffold	Broad Institute	SAMN02470500	GCA_000272085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/085/GCA_000272085.2_ASM27208v2	22955834	ZF-91
Variovorax sp. OV084	1882777	PRJEB17068	351140	Proteobacteria	Betaproteobacteria	7.38745	66.3	-	FOII01	60	6917	6763	10/29/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443580	GCA_900111625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/625/GCA_900111625.1_IMG-taxon_2687453687_annotated_assembly	-	OV084
Mesorhizobium sp. Root695	1736589	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	6.56552	62.5	-	LMHO01	46	6506	6148	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155858	GCA_001428185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/185/GCA_001428185.1_Root695	26633631	Root695
Methylophaga sp. UBA2012	1946870	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.08913	43.4	-	DDCG01	20	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451675	GCA_002335235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/235/GCA_002335235.1_ASM233523v1	28894102	-
Cellulomonas sp. A375-1	1672219	PRJNA287280	287280	Terrabacteria group	Actinobacteria	3.76544	73.1	-	LFKW01	160	3455	3117	6/26/15	4/10/17	Scaffold	University of Wisconsin-Madison	SAMN03779944	GCA_001040865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/040/865/GCA_001040865.1_ASM104086v1	-	A375-1
Chryseobacterium sp. CF356	1500283	PRJNA247525	247525	FCB group	Bacteroidetes/Chlorobi group	3.93966	34.8	-	JUGW01	65	3752	3586	12/9/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02787110	GCA_000799515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/515/GCA_000799515.1_ASM79951v1	-	CF356
Sulfurimonas sp. RIFOXYD2_FULL_34_21	1802261	PRJNA288027	288027	Proteobacteria	delta/epsilon subdivisions	2.36046	34.5	-	MICH01	15	2334	2271	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314651	GCA_001830805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/805/GCA_001830805.1_ASM183080v1	27774985	-
Atopobium sp. UBA4302	1946071	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.48411	59.8	-	DGUU01	59	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453876	GCA_002394775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/775/GCA_002394775.1_ASM239477v1	28894102	-
Chlamydia trachomatis E/Bour	596777	PRJEA71077	71077	PVC group	Chlamydiae	1.05009	41.2636	chromosome:NC_020971.1/HE601870.1; plasmid pBour:NC_020947.1/HE603212.1	-	2	973	905	3/13/12	3/23/17	Complete Genome	Sanger Institute	SAMEA2272184	GCA_000318645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/645/GCA_000318645.1_ASM31864v1	-	E/Bour
Aeromicrobium sp. REDSEA-S38_B2	1811528	PRJNA289734	289734	Terrabacteria group	Actinobacteria	3.49017	72.1	-	LUNH01	104	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534557	GCA_001628525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/525/GCA_001628525.1_ASM162852v1	27377622	-
Idiomarina sp. UBA1919	1946640	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.95677	46.1	-	DDFV01	57	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06455532	GCA_002352855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/855/GCA_002352855.1_ASM235285v1	28894102	-
Halomonas sp. Marseille-P2426	1816686	PRJEB18749	359774	Proteobacteria	Gammaproteobacteria	3.43564	58.3	-	FTLE01	23	3241	3071	1/4/17	4/16/17	Scaffold	URMITE	SAMEA37051918	GCA_900155385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/385/GCA_900155385.1_PRJEB18749	-	Marseille-P2426
Sphingobium sp. Leaf26	1735693	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.82215	63.5	-	LMKV01	33	4471	4292	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151590	GCA_001421665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/665/GCA_001421665.1_ASM142166v1	26633631	Leaf26
Rothia sp. HMSC069C10	1739346	PRJNA299996	299996	Terrabacteria group	Actinobacteria	2.28591	59.5	-	LTEP01	25	1811	1716	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477654	GCA_001812205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/205/GCA_001812205.1_ASM181220v1	-	HMSC069C10
Rhodanobacter sp. B05	1945859	PRJNA369723	369723	Proteobacteria	Gammaproteobacteria	3.81571	65.4	-	MUNU01	19	3324	3234	2/16/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN06293013	GCA_002001085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/085/GCA_002001085.1_ASM200108v1	-	B05
Thiomonas sp. 15-63-373	1970451	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	0.938683	62.7	-	NCKD01	339	1133	950	8/16/17	8/16/17	Scaffold	None	SAMN06622199	GCA_002282725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/725/GCA_002282725.1_ASM228272v1	-	-
Sphingobacterium sp. 40-24	1895843	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	6.32301	40.1	-	MKWH01	73	5360	5227	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660628	GCA_001899705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/705/GCA_001899705.1_ASM189970v1	-	-
Desulfosporosinus sp. UBA4048	1946408	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.48628	44	-	DFZU01	56	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457345	GCA_002382785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/785/GCA_002382785.1_ASM238278v1	28894102	-
Selenomonas sp. FOBRC9	936573	PRJNA78573	78573	Terrabacteria group	Firmicutes	2.33625	57.1	-	ALJR01	49	2327	2185	8/13/12	4/17/17	Contig	J. Craig Venter Institute	SAMN00828779	GCA_000287655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/655/GCA_000287655.1_SspFOBRC9v1.0	-	FOBRC9
Methanosarcina sp. Ant1	1882735	PRJNA330682	330682	Euryarchaeota	Methanomicrobia	4.29135	40.1	-	MDTP02	342	3548	3244	8/26/16	10/3/16	Contig	University of Tennessee	SAMN05438611	GCA_001714685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/685/GCA_001714685.2_ASM171468v2	-	-
Pseudonocardia sp. Ae168_Ps1	1885029	PRJNA336250	336250	Terrabacteria group	Actinobacteria	6.50977	73.6	-	MCIK01	14	6101	5682	1/4/17	4/17/17	Scaffold	University of East Anglia	SAMN05506984	GCA_001932335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/335/GCA_001932335.1_ASM193233v1	-	Ae168_Ps1
Afipia sp. TMED4	1986602	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	5.16352	61.4	-	NHBJ01	49	4991	4840	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971858	GCA_002172955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/955/GCA_002172955.1_ASM217295v1	-	-
Thalassospira sp. UBA1131	1947672	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	4.4284	54.1	-	DCAO01	135	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06455188	GCA_002311515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/515/GCA_002311515.1_ASM231151v1	28894102	-
Collinsella sp. UBA1693	1946385	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.3656	60.3	-	DCJT01	13	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453404	GCA_002320115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/115/GCA_002320115.1_ASM232011v1	28894102	-
Capnocytophaga sp. oral taxon 335 str. F0486	1125720	PRJNA78901	78901	FCB group	Bacteroidetes/Chlorobi group	2.54599	39.6	-	AKFR01	38	2249	2111	7/10/12	4/17/17	Contig	J. Craig Venter Institute	SAMN00792204	GCA_000277665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/665/GCA_000277665.1_Coraltaxon335F0486v1.0	-	F0486
Neisseria sp. HMSC077D05	1715079	PRJNA296207	296207	Proteobacteria	Betaproteobacteria	2.77843	50.6	-	LTJX01	182	2800	2535	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477500	GCA_001809325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/325/GCA_001809325.1_ASM180932v1	-	HMSC077D05
Campylobacter sp. RM8970	1895636	PRJNA341054	341054	Proteobacteria	delta/epsilon subdivisions	1.49687	32.4	-	MJLO01	44	1532	1467	5/15/17	9/19/17	Contig	USDA	SAMN05687074	GCA_002139795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/795/GCA_002139795.1_ASM213979v1	28854596	RM8970
Alistipes sp. CAG:53	1262697	PRJEB920	206732	FCB group	Bacteroidetes/Chlorobi group	2.69929	59.7	-	CBAY01	142	2228	2193	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138559	GCA_000433435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/435/GCA_000433435.1_MGS53	-	-
Olsenella sp. Marseille-P3256	1871031	PRJEB17947	353838	Terrabacteria group	Actinobacteria	2.37496	68.8	-	FPKO01	9	2092	1995	11/17/16	4/16/17	Contig	URMITE	SAMEA4548191	GCA_900119385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/385/GCA_900119385.1_PRJEB17947	-	Marseille-P3256
Propionibacterium sp. HMSC078F10	1739386	PRJNA300036	300036	Terrabacteria group	Actinobacteria	2.54424	60	-	LTXP01	22	2549	2408	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480049	GCA_001812935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/935/GCA_001812935.1_ASM181293v1	-	HMSC078F10
Ralstonia sp. JGI 0001001-C06	1268318	PRJNA183552	183552	Proteobacteria	Betaproteobacteria	5.71701	63.4	-	AXYO01	192	-	-	10/25/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02440750	GCA_000483345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/345/GCA_000483345.1_ASM48334v1	-	JGI 0001001-C06
Parabacteroides sp. CAG:2	1262912	PRJEB753	206639	FCB group	Bacteroidetes/Chlorobi group	4.56133	45.1	-	CBDT01	83	3849	3788	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138700	GCA_000436315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/315/GCA_000436315.1_MGS2	-	-
Micromonospora sp. NBS 11-29	1960879	PRJNA362182	362182	Terrabacteria group	Actinobacteria	6.47394	73	-	NAPR01	41	5759	4813	5/16/17	7/19/17	Scaffold	University of Sao Paulo	SAMN06235086	GCA_002140155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/155/GCA_002140155.1_ASM214015v1	-	NBS 11/29
Actinomyces sp. oral taxon 172 str. F0311	1321775	PRJNA198883	198883	Terrabacteria group	Actinobacteria	2.46999	66.4	-	AWSF01	215	2147	1932	9/10/13	4/17/17	Scaffold	Washington University	SAMN02436818	GCA_000466265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/265/GCA_000466265.1_ASM46626v1	-	F0311
uncultured Desulfovibrio sp.	167968	PRJEB13531	390589	Proteobacteria	delta/epsilon subdivisions	3.60702	57.4	-	FLUP01	1	3500	3422	6/15/17	6/15/17	Scaffold	Genoscope CEA	SAMEA3931514	GCA_900079715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/715/GCA_900079715.1_APW_PRJEB13531_v1	-	-
Prochlorococcus sp. MIT 1306	1799667	PRJNA311757	311757	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.49894	50.5	-	LVHL01	12	2471	2367	4/25/16	4/12/17	Contig	MIT	SAMN04488532	GCA_001631985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/985/GCA_001631985.1_ASM163198v1	-	MIT 1306
Shigella sp. FC1139	1892899	PRJNA339984	339984	Proteobacteria	Gammaproteobacteria	4.25107	50.8	-	MECX01	388	4505	3845	9/8/16	9/8/16	Scaffold	Christian Medical College	SAMN05617279	GCA_001722205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/205/GCA_001722205.1_ASM172220v1	-	FC1139
Exiguobacterium sp. BMC-KP	1684312	PRJNA289685	289685	Terrabacteria group	Firmicutes	3.31907	45.9	-	LGIW01	17	3407	3341	8/27/15	4/11/17	Contig	Bryn Mawr College	SAMN03857009	GCA_001275385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/385/GCA_001275385.1_ASM127538v1	26450734	BMC-KP
Bacteroides sp. 3_1_19	469592	PRJNA41951	41951	FCB group	Bacteroidetes/Chlorobi group	5.25012	45	-	ADCJ01	36	4490	4248	4/28/10	5/18/17	Scaffold	Broad Institute	SAMN02463818	GCA_000163655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/655/GCA_000163655.1_ASM16365v1	-	3_1_19
Thioalkalivibrio sp. ALE28	1158179	PRJNA176948	176948	Proteobacteria	Gammaproteobacteria	2.91002	67.1	-	ARIH01	29	2860	2710	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440456	GCA_000377425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/425/GCA_000377425.1_ASM37742v1	-	ALE28
Ruminococcus sp. CAG:724	1262966	PRJEB990	206756	Terrabacteria group	Firmicutes	1.78937	48.6	-	CAZP01	123	1665	1633	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138491	GCA_000432075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/075/GCA_000432075.1_MGS724	-	-
Paenibacillus sp. oral taxon 786 str. D14	621372	PRJNA34703	34703	Terrabacteria group	Firmicutes	5.09741	51.8	-	ACIH01	75	4585	4256	4/2/09	5/19/17	Scaffold	Broad Institute	SAMN02463722	GCA_000159955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/955/GCA_000159955.1_ASM15995v1	-	D14
Thermotoga sp. 4484_232	1968524	PRJNA362212	362212	Thermotogae	Thermotogae	0.974182	42.5	-	MZGO01	109	1100	1003	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06560480	GCA_002084985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/985/GCA_002084985.1_ASM208498v1	-	-
Stenotrophomonas sp. CC120222-04	1378088	PRJEB21383	391613	Proteobacteria	Gammaproteobacteria	4.62082	66.4	-	FZQI01	20	4215	4091	7/19/17	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02744786	GCA_900187955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/955/GCA_900187955.1_IMG-taxon_2547132468_annotated_assembly	-	CC120222-04
Pseudovibrio sp. WM33	1735585	PRJNA298121	298121	Proteobacteria	Alphaproteobacteria	5.74573	51.2	-	LMCK01	159	5330	5056	4/19/16	4/12/17	Scaffold	University College Cork	SAMN04147125	GCA_001623165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/165/GCA_001623165.1_ASM162316v1	27065959	WM33
Pedobacter sp. UBA2067	1947059	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.58508	43.8	-	DDAD01	172	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457242	GCA_002333205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/205/GCA_002333205.1_ASM233320v1	28894102	-
Brevundimonas sp. ZS04	1906854	PRJNA345349	345349	Proteobacteria	Alphaproteobacteria	3.42153	67.4	-	MTHE01	79	3318	3208	1/18/17	4/17/17	Contig	University of Huddersfield	SAMN05861045	GCA_001956865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/865/GCA_001956865.1_ASM195686v1	-	ZS04
Alcanivorax sp. HI0003	1822217	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	3.63545	59.1	-	LWEI01	378	3416	3208	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580756	GCA_001635515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/515/GCA_001635515.1_ASM163551v1	-	HI0003
Eubacterium sp. CAG:274	1262888	PRJEB806	206776	Terrabacteria group	Firmicutes	2.18701	33.3	-	CBEX01	72	2044	2006	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138495	GCA_000432155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/155/GCA_000432155.1_MGS274	-	-
Janthinobacterium sp. HH100	1537272	PRJNA309036	309036	Proteobacteria	Betaproteobacteria	6.69773	62.6	-	LRHY01	150	6044	5844	10/11/16	4/13/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04320686	GCA_001758685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/685/GCA_001758685.1_ASM175868v1	27833590	HH100
Caulobacter sp. CCH5-E12	1768770	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	4.85891	66.7	-	LSJD01	303	4640	4393	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299454	GCA_001556585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/585/GCA_001556585.1_ASM155658v1	-	CCH5-E12
Psychrobacter sp. C 20.9	1926477	PRJNA353858	353858	Proteobacteria	Gammaproteobacteria	3.14314	43.9	-	MRYC01	60	2727	2619	12/24/16	4/16/17	Contig	Universidad de Santiago de Compostela	SAMN06020697	GCA_001921765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/921/765/GCA_001921765.1_ASM192176v1	-	C 20.9
Acidovorax sp. Root568	1736565	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	5.10377	64.9	-	LMGP01	20	4679	4574	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155834	GCA_001427445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/445/GCA_001427445.1_Root568	26633631	Root568
Marinobacter sp. YWL01	1766722	PRJNA305079	305079	Proteobacteria	Gammaproteobacteria	4.84786	55.7	-	LORG01	965	4255	4152	3/28/16	4/12/17	Contig	Ningbo University	SAMN04324267	GCA_001601275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/275/GCA_001601275.1_ASM160127v1	-	YWL01
Polaribacter sp. BACL8 MAG-120531-bin13	1655554	PRJNA273799	273799	FCB group	Bacteroidetes/Chlorobi group	2.08653	38.3	-	LICK01	208	1943	1775	11/6/15	11/6/15	Contig	Kungliga Tekniska Hogskolan	SAMN03741984	GCA_001439215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/215/GCA_001439215.1_ASM143921v1	-	-
Sulfitobacter sp. HI0082	1822257	PRJNA305749	305749	Proteobacteria	Alphaproteobacteria	5.44314	60.8	-	LWFW01	2310	5251	4483	5/2/16	5/2/16	Contig	Massachusetts Institute of Technology	SAMN04580796	GCA_001635155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/155/GCA_001635155.1_ASM163515v1	-	HI0082
Erythrobacter sp. HI0077	1822252	PRJNA305749	305749	Proteobacteria	Alphaproteobacteria	3.16111	64.3	-	LWFR01	592	3208	2884	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580791	GCA_001635065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/065/GCA_001635065.1_ASM163506v1	-	HI0077
Epulopiscium sp. Nele67-Bin004	1764962	PRJNA294498	294498	Terrabacteria group	Firmicutes	2.8763	34.5	-	LNZQ01	229	2712	2475	2/27/17	2/27/17	Scaffold	King Abdullah University of Science and Technology (KAUST)	SAMN04288926	GCA_002007315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/315/GCA_002007315.1_Nele67M	-	-
Nocardioides sp. Root190	1736488	PRJNA297942	297942	Terrabacteria group	Actinobacteria	5.01492	70.3	-	LMIA01	14	4766	4656	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155757	GCA_001428565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/565/GCA_001428565.1_Root190	26633631	Root190
Paracoccus sp. UBA889	1947056	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.2475	65.2	-	DBFD01	79	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457650	GCA_002294185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/185/GCA_002294185.1_ASM229418v1	28894102	-
Methylobacterium sp. Leaf93	1736249	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.74644	67	-	LMMS01	31	4403	4252	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151629	GCA_001422345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/345/GCA_001422345.1_Leaf93	26633631	Leaf93
Citrobacter sp. MGH106	1686381	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.95105	50.7	-	LESQ01	2	4811	4563	6/19/15	4/10/17	Scaffold	Broad Institute	SAMN03280166	GCA_001037495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/495/GCA_001037495.1_Citr_freu_complex_MGH106_V1	-	MGH106
Treponema sp. UBA937	1947761	PRJNA348753	348753	Spirochaetes	Spirochaetia	3.01497	44.5	-	DBDH01	115	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451392	GCA_002293455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/455/GCA_002293455.1_ASM229345v1	28894102	-
Novosphingobium sp. Leaf2	1735670	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	3.71574	64.1	-	LMJY01	22	3529	3400	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151573	GCA_001421325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/325/GCA_001421325.1_Leaf2	26633631	Leaf2
Lactobacillus sp. HMSC066G01	1739342	PRJNA299992	299992	Terrabacteria group	Firmicutes	2.98307	46.6	-	LTET01	126	3020	2801	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477650	GCA_001812155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/155/GCA_001812155.1_ASM181215v1	-	HMSC066G01
Enterococcus sp. HMSC063H10	1739297	PRJNA299947	299947	Terrabacteria group	Firmicutes	2.85949	37.8	-	LTGJ01	149	2950	2752	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477604	GCA_001811285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/285/GCA_001811285.1_ASM181128v1	-	HMSC063H10
Prevotella sp. HMSC077E09	1739487	PRJNA300137	300137	FCB group	Bacteroidetes/Chlorobi group	3.13409	44.2	-	LTUI01	125	2682	2507	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480455	GCA_001814685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/685/GCA_001814685.1_ASM181468v1	-	HMSC077E09
Pantoea sp. 9140	1500896	PRJNA247914	247914	Proteobacteria	Gammaproteobacteria	4.83947	55.3	-	JQNO01	3	4559	4330	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02787012	GCA_000745295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/295/GCA_000745295.1_ASM74529v1	-	9140
Sulfurovum sp. 39-42-12	1970446	PRJNA379596	379596	Proteobacteria	delta/epsilon subdivisions	1.84038	42.3	-	NCJD01	102	1912	1849	8/16/17	8/16/17	Scaffold	None	SAMN06622225	GCA_002282355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/355/GCA_002282355.1_ASM228235v1	-	-
Polaromonas sp. 35-63-35	1970418	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	4.9125	62.9	-	NCFQ01	52	4807	4668	8/16/17	8/16/17	Contig	None	SAMN06622316	GCA_002281265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/265/GCA_002281265.1_ASM228126v1	-	-
Serratia sp. H1n	1397284	PRJNA226207	226207	Proteobacteria	Gammaproteobacteria	6.12336	53.8	-	AYMN01	247	5761	5449	4/18/14	4/9/17	Contig	University of Malaya	SAMN02729855	GCA_000633315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/315/GCA_000633315.1_de_novo	-	H1n
Bifidobacterium sp. UBA1623	1946095	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.65512	60.6	-	DCML01	169	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452195	GCA_002321405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/405/GCA_002321405.1_ASM232140v1	28894102	-
Mycobacterium sp. H4Y	1168288	PRJNA156949	156949	Terrabacteria group	Actinobacteria	5.44302	68.1	-	AKIG01	4	5147	4985	1/17/13	5/19/17	Scaffold	Seoul National University College of Medicine	SAMN02470905	GCA_000364405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/405/GCA_000364405.1_ASM36440v1	23472222	H4Y
Streptococcus sp. oral taxon 058 str. F0407	861455	PRJNA50403	50403	Terrabacteria group	Firmicutes	1.8489	41.2	-	AGAE01	22	1849	1737	11/15/11	4/17/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN02299440	GCA_000235485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/485/GCA_000235485.1_ASM23548v1	-	F0407
Bradyrhizobium sp. Cp5.3	443598	PRJNA195750	195750	Proteobacteria	Alphaproteobacteria	8.91878	63.4	-	AUFA01	148	8486	8000	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441187	GCA_000426265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/265/GCA_000426265.1_ASM42626v1	-	Cp5.3
Shewanella sp. P1-14-1	1723761	PRJNA294442	294442	Proteobacteria	Gammaproteobacteria	4.91642	40.8	-	LKTL01	150	4220	4111	10/21/15	4/11/17	Contig	Hans Knoell Institute	SAMN04043846	GCA_001401775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/775/GCA_001401775.1_ASM140177v1	26893410	P1-14-1
Nostoc sp. MBR 210	1881015	PRJNA329640	329640	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.93175	40.6	-	MBRD01	36	5793	5621	8/3/16	8/3/16	Scaffold	Singapore-MIT Alliance for Research and Technology	SAMN05416363	GCA_001698435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/435/GCA_001698435.1_ASM169843v1	-	-
Escherichia sp. TW14182	754336	PRJNA56133	56133	Proteobacteria	Gammaproteobacteria	4.67943	50.4	-	AEJZ01	533	4859	4442	4/21/11	5/18/17	Contig	"Georgia Institute of Technology, School of Civil and Environmental Engineering"	SAMN02469845	GCA_000208525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/208/525/GCA_000208525.2_ASM20852v2	21482770	TW14182
Corynebacterium sp. KPL1855	1203562	PRJNA169442	169442	Terrabacteria group	Actinobacteria	2.51208	58.8	-	AXLX01	8	2367	2196	10/21/13	4/17/17	Scaffold	Broad Institute	SAMN02597004	GCA_000478075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/075/GCA_000478075.1_Cory_sp_KPL1855_V1	-	KPL1855
Staphylococcus sp. HMSC14D10	1581102	PRJNA269871	269871	Terrabacteria group	Firmicutes	2.38365	32.5	-	LUAM01	57	2337	2202	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03287018	GCA_001808125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/125/GCA_001808125.1_ASM180812v1	-	HMSC14D10
Enterobacter sp. MGH 22	1329826	PRJNA201937	201937	Proteobacteria	Gammaproteobacteria	4.68438	55.1	-	AYJI01	1	4505	4316	10/30/13	4/10/17	Scaffold	Broad Institute	SAMN02138562	GCA_000493055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/055/GCA_000493055.1_Ente_cloa_complex_MGH_22_V1	-	MGH 22
Rhodococcus sp. JG-3	1305835	PRJNA195882	195882	Terrabacteria group	Actinobacteria	5.28692	64.5	-	AXVF01	6	4968	4848	10/25/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441111	GCA_000482405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/405/GCA_000482405.1_ASM48240v1	26380646	JG-3
Chlamydia trachomatis L2b/UCH-2	1071774	PRJEA71109	71109	PVC group	Chlamydiae	1.04634	41.2636	chromosome:NC_020931.1/HE601956.1; plasmid pL2bUCH2:NC_020956.1/HE603227.1	-	2	973	902	3/13/12	3/23/17	Complete Genome	Sanger Institute	SAMEA2272096	GCA_000318925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/925/GCA_000318925.1_ASM31892v1	22406642	L2b/UCH-2
Sphingomonas sp. Leaf5	1735671	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.00139	66.4	-	LMJZ01	25	3635	3513	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151575	GCA_001421155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/155/GCA_001421155.1_Leaf5	26633631	Leaf5
Clostridium sp. ATCC 29733	1507	PRJNA181040	181040	Terrabacteria group	Firmicutes	3.08473	61.6	-	AWTA01	161	2989	2725	9/12/13	4/9/17	Scaffold	Washington University	SAMN02436888	GCA_000466605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/605/GCA_000466605.1_ASM46660v1	-	ATCC 29733
Chlamydia trachomatis L1/115	1071770	PRJEA71101	71101	PVC group	Chlamydiae	1.04658	41.2635	chromosome:NC_020929.1/HE601952.1; plasmid pL1115:NC_020951.1/HE603218.1	-	2	972	900	3/13/12	3/23/17	Complete Genome	Sanger Institute	SAMEA2271978	GCA_000318845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/845/GCA_000318845.1_ASM31884v1	22406642	L1/115
Frankia sp. CgIM4	1742262	PRJNA299305	299305	Terrabacteria group	Actinobacteria	5.19909	70.1	-	MAQZ01	135	4580	4193	10/11/16	4/13/17	Contig	University of New Hampshire	SAMN04196701	GCA_001756285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/285/GCA_001756285.1_ASM175628v1	-	CgIM4
Flavobacterium sp. 83	1131812	PRJNA223103	223103	FCB group	Bacteroidetes/Chlorobi group	3.79062	33.3	-	JQMS01	1	3272	3151	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02745985	GCA_000744835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/835/GCA_000744835.1_ASM74483v1	25700420	83
Klebsiella sp. HMSC09D12	1581146	PRJNA269915	269915	Proteobacteria	Gammaproteobacteria	6.18011	54.8	-	LUAR01	141	6057	5760	10/17/16	2/21/17	Scaffold	The Genome Institute at Washington University	SAMN03609714	GCA_001808475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/475/GCA_001808475.1_ASM180847v1	-	HMSC09D12
Bacillus safensis	561879	PRJNA361207	361207	Terrabacteria group	Firmicutes	3.85323	41.5	-	MUNL01	91	4074	3764	5/22/17	6/15/17	Contig	"MedBiotech laboratory, faculty of medicine and pharmacy, rabat/ Mohamed V university rabat"	SAMN06297988	GCA_002155005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/005/GCA_002155005.1_ASM215500v1	-	Bcs96
Acinetobacter sp. CIP 102129	1144664	PRJNA183311	183311	Proteobacteria	Gammaproteobacteria	2.9979	42	-	APPA01	11	2895	2639	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01828171	GCA_000368305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/305/GCA_000368305.1_Acin_sp_CIP_102129_V1	-	CIP 102129
Bordetella holmesii CDC-H585-BH	1331206	PRJNA202118	202118	Proteobacteria	Betaproteobacteria	3.5874	62.8	-	JFZZ01	150	3654	3165	4/29/14	4/2/17	Contig	JCVI	SAMN02263918	GCA_000649045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/045/GCA_000649045.1_gbb10v01	24948754	CDC-H585-BH
Paeniclostridium sordellii	1505	PRJEB8131	277656	Terrabacteria group	Firmicutes	3.60345	27.3	-	CELK01	153	3498	3380	3/13/15	4/4/17	Contig	WTSI	SAMEA1572110	GCA_001372515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/515/GCA_001372515.1_W2922	-	W2922
Chlamydia trachomatis	813	PRJNA266925	266925	PVC group	Chlamydiae	1.04636	41.2634	chromosome:NZ_CP009923.1/CP009923.1; plasmid unnamed:NZ_CP009924.1/CP009924.1	-	2	974	903	4/13/15	3/26/17	Complete Genome	"National Institute of Health, Portugal"	SAMN03195884	GCA_000971705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/705/GCA_000971705.1_ASM97170v1	25745888	L2b/CS19/08
Staphylococcus equorum	246432	PRJNA301343	301343	Terrabacteria group	Firmicutes	3.07078	32.8	-	LNPX01	117	3069	2916	9/28/16	4/5/17	Scaffold	Tufts University	SAMN04244247	GCA_001747785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/785/GCA_001747785.1_ASM174778v1	-	738_7
Alcaligenes faecalis	511	PRJNA353361	353361	Proteobacteria	Betaproteobacteria	4.44353	56.9	-	MSZQ01	71	4122	3981	5/9/17	5/22/17	Contig	New Jersey Medical School-Rutgers University	SAMN06200347	GCA_002120025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/025/GCA_002120025.1_ASM212002v1	-	GZAF4
Chlamydia trachomatis	813	PRJNA266926	266926	PVC group	Chlamydiae	1.04636	41.2634	chromosome:NZ_CP009925.1/CP009925.1; plasmid unnamed:NZ_CP009926.1/CP009926.1	-	2	974	903	4/13/15	3/26/17	Complete Genome	"National Institute of Health, Portugal"	SAMN03195889	GCA_000971725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/725/GCA_000971725.1_ASM97172v1	25745888	L2b/CS784/08
Pseudomonas chlororaphis subsp. chlororaphis GP72	1117110	PRJNA77215	77215	Proteobacteria	Gammaproteobacteria	6.62988	63.1	-	AHAY01	347	6119	5837	12/9/11	5/19/17	Contig	Shanghai Jiao Tong University	SAMN02470965	GCA_000237045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/045/GCA_000237045.2_ASM23704v2	22328763	GP72
Enterococcus cecorum	44008	PRJNA377666	377666	Terrabacteria group	Firmicutes	1.99249	36.6	-	NFHQ01	44	1958	1775	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473747	GCA_002161395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/395/GCA_002161395.1_ASM216139v1	-	An69
Vibrio cyclitrophicus FF75	1136163	PRJNA81871	81871	Proteobacteria	Gammaproteobacteria	5.00194	43.6	-	AIDE02	73	4425	4281	3/26/12	4/5/17	Scaffold	Massachusetts Institute of Technology	SAMN02470295	GCA_000256205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/205/GCA_000256205.2_ASM25620v2	22491847	FF75
Pseudomonas fragi	296	PRJNA397499	397499	Proteobacteria	Gammaproteobacteria	5.14368	58.2	-	NQKU01	54	4798	4626	8/24/17	8/27/17	Scaffold	CSIRO Agriculture and Food	SAMN07459802	GCA_002269515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/515/GCA_002269515.1_ASM226951v1	-	F1791
Cronobacter malonaticus	413503	PRJNA257996	257996	Proteobacteria	Gammaproteobacteria	4.47093	56.9	-	JPZG01	309	4441	4088	8/20/14	4/2/17	Scaffold	"Nottingham Trent University, UK"	SAMN02981215	GCA_000742395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/395/GCA_000742395.1_ASM74239v1	-	1558
Pseudoalteromonas luteoviolacea S4060-1	1365257	PRJNA213495	213495	Proteobacteria	Gammaproteobacteria	5.95302	42.2	-	AUXX01	74	5085	4932	4/22/16	4/5/17	Contig	Technical University of Denmark	SAMN02250942	GCA_001625705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/625/705/GCA_001625705.1_S4060-1_1.0	-	S4060-1
Chlamydia trachomatis L2/434/Bu(i)	1263406	PRJNA182150	182150	PVC group	Chlamydiae	1.04634	41.2634	chromosome:NC_021050.1/CP003963.1; plasmid pL2/434/Bu(i):NC_021051.1/CP003964.1	-	2	973	902	4/15/13	3/23/17	Complete Genome	"National Institute of Health, Portugal"	SAMN02603648	GCA_000364765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/765/GCA_000364765.1_ASM36476v1	23542454	L2/434/Bu(i)
Chlamydia trachomatis L2/434/Bu(f)	1262673	PRJNA182165	182165	PVC group	Chlamydiae	1.04634	41.2634	chromosome:NC_021052.1/CP003965.1; plasmid pL2/434/Bu(f):NC_021049.1/CP003966.1	-	2	973	902	4/15/13	3/23/17	Complete Genome	"National Institute of Health, Portugal"	SAMN02603649	GCA_000364785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/785/GCA_000364785.1_ASM36478v1	23542454	L2/434/Bu(f)
Pseudomonas psychrotolerans	237610	PRJNA278255	278255	Proteobacteria	Gammaproteobacteria	4.8375	65.9	-	LDSR01	192	4505	4366	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401420	GCA_001477475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/475/GCA_001477475.1_ASM147747v1	26793183	NS337
Xanthomonas arboricola pv. juglandis	195709	PRJNA275685	275685	Proteobacteria	Gammaproteobacteria	5.08448	65.5	-	JZEF01	8	4451	4123	5/27/15	4/3/17	Scaffold	INRA	SAMN03352151	GCA_001013475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/013/475/GCA_001013475.1_ASM101347v1	-	CFBP 2528
Salinispora pacifica DSM 45548	999544	PRJNA74471	74471	Terrabacteria group	Actinobacteria	5.09779	69.9	-	AQZE01	2	4813	4556	4/22/13	5/19/17	Scaffold	JGI	SAMN02261277	GCA_000378825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/825/GCA_000378825.1_ASM37882v1	-	DSM 45548
Leptospira kirschneri str. JB	1218584	PRJNA177159	177159	Spirochaetes	Spirochaetia	4.36015	36	-	ANIM01	157	3952	3534	3/15/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01801607	GCA_000346895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/895/GCA_000346895.1_gls454198v01	-	JB
Xanthomonas vasicola pv. vasculorum	325776	PRJNA374557	374557	Proteobacteria	Gammaproteobacteria	4.87088	63.2	-	MVYX01	130	4440	3943	6/13/17	6/15/17	Contig	Colorado State University	SAMN06328297	GCA_002191955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/955/GCA_002191955.1_ASM219195v1	-	SAM119
Chlamydia trachomatis L1/224	1071771	PRJEA71103	71103	PVC group	Chlamydiae	1.04632	41.2634	chromosome:NC_020973.1/HE601953.1; plasmid pL1224:NC_020952.1/HE603220.1	-	2	974	903	3/13/12	3/23/17	Complete Genome	Sanger Institute	SAMEA2272374	GCA_000318865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/865/GCA_000318865.1_ASM31886v1	22406642	L1/224
Rhodococcus fascians D188	1051973	PRJNA233522	233522	Terrabacteria group	Actinobacteria	5.43575	64.6	-	JMET01	48	5116	4967	9/30/14	4/2/17	Scaffold	Oregon State University	SAMN02569997	GCA_000760975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/975/GCA_000760975.1_R_fas_D188	-	D188
Campylobacter lanienae	75658	PRJNA341005	341005	Proteobacteria	delta/epsilon subdivisions	1.54845	34.6	-	MJJS01	21	1602	1525	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687025	GCA_002138525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/525/GCA_002138525.1_ASM213852v1	28854596	P163
Leclercia adecarboxylata	83655	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.70517	55.6	-	DBZH01	47	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06452724	GCA_002311085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/085/GCA_002311085.1_ASM231108v1	28894102	-
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28391	32.4	chromosome:AP017600.1	-	1	-	-	1/24/17	1/27/17	Chromosome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053851	GCA_002356735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/735/GCA_002356735.1_ASM235673v1	-	M99123
Staphylococcus xylosus	1288	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.79437	32.6	-	FMRS01	10	2658	2571	9/30/16	4/5/17	Scaffold	SC	SAMEA1929513	GCA_900098615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/615/GCA_900098615.1_10900_2_26	-	47-83
Vibrio campbellii CAIM 519 = NBRC 15631	1224742	PRJNA173088	173088	Proteobacteria	Gammaproteobacteria	5.07625	45	-	AMDG01	213	4922	4519	1/29/13	5/19/17	Contig	"CIAD, A.C."	SAMN02469609	GCA_000334195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/195/GCA_000334195.1_Vc-CAIM519	-	CAIM 519
Mycobacterium chelonae	1774	PRJNA347845	347845	Terrabacteria group	Actinobacteria	5.35757	64	-	MLIJ01	22	5312	5172	10/26/16	4/5/17	Contig	University of Georgia	SAMN05897991	GCA_001853805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/805/GCA_001853805.1_ASM185380v1	-	1558
Actinomyces naeslundii	1655	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.13984	67.9	-	MSRQ01	61	2686	2533	1/18/17	4/6/17	Scaffold	King's College London	SAMN05898702	GCA_001956505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/505/GCA_001956505.1_ASM195650v1	-	R24330
Geobacillus sp. Sah69	1737624	PRJNA298658	298658	Terrabacteria group	Firmicutes	2.9915	52.6	-	LLKS01	73	3313	2787	10/26/15	4/11/17	Contig	University of Pretoria	SAMN04161460	GCA_001414205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/205/GCA_001414205.1_ASM141420v1	26679578	Sah69
Streptococcus sobrinus TCI-80	1074063	PRJNA71895	71895	Terrabacteria group	Firmicutes	1.99628	43.7	-	AGGM01	414	2028	1769	10/6/11	3/30/17	Contig	JCVI	SAMN02436340	GCA_000228005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/005/GCA_000228005.2_SMUT1-NEX_12-80	-	TCI-80
Morganella morganii subsp. morganii NBRC 3848	1223504	PRJDB430	173149	Proteobacteria	Gammaproteobacteria	3.77741	51.2	-	BCZU01	25	3641	3516	3/11/16	4/5/17	Contig	National Institute of Technology and Evaluation	SAMD00046901	GCA_001598895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/895/GCA_001598895.1_ASM159889v1	-	NBRC 3848
Staphylococcus sciuri	1296	PRJNA379742	379742	Terrabacteria group	Firmicutes	3.01309	32.3	-	NADO01	34	3039	2922	4/13/17	4/17/17	Contig	University of North Texas	SAMN06619311	GCA_002091355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/355/GCA_002091355.1_ASM209135v1	-	LCHXa
Lactobacillus curvatus JCM 1096 = DSM 20019	1293592	PRJDB798	243709	Terrabacteria group	Firmicutes	1.81479	41.9	-	BBBQ01	72	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000413	GCA_001311645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/645/GCA_001311645.1_ASM131164v1	-	JCM 1096
Enterococcus hirae	1354	PRJNA342049	342049	Terrabacteria group	Firmicutes	2.96681	36.6	-	MJDS01	62	2826	2593	4/3/17	4/5/17	Contig	Lethbridge Research Centre	SAMN05735016	GCA_002077365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/365/GCA_002077365.1_ASM207736v1	28270110	F0221F 13
Burkholderia cepacia	292	PRJNA253772	253772	Proteobacteria	Betaproteobacteria	8.94713	65.9	-	JPEG01	25	8262	7862	7/11/14	4/2/17	Contig	University of Malaya	SAMN02892978	GCA_000724975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/975/GCA_000724975.1_ASM72497v1	-	RB-39
Vibrio nigripulchritudo SFn118	1238447	PRJEB560	222440	Proteobacteria	Gammaproteobacteria	6.08185	45.7	-	CAOC01	235	5507	5404	10/1/13	4/5/17	Contig	Genoscope CEA	SAMEA3146333	GCA_900005135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/005/135/GCA_900005135.1_ASP_PRJEB560_v1	23739050	SFn118
Pantoea agglomerans NBRC 102470	1220570	PRJDB388	172587	Proteobacteria	Gammaproteobacteria	4.65204	55.1	-	BCZA01	25	4380	4200	3/11/16	4/5/17	Contig	National Institute of Technology and Evaluation	SAMD00046726	GCA_001598475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/475/GCA_001598475.1_ASM159847v1	-	NBRC 102470
Mycobacterium africanum MAL010111	1354174	PRJNA211657	211657	Terrabacteria group	Actinobacteria	4.38741	65.6	-	JLAF01	6	4238	4031	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02231124	GCA_000666585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/585/GCA_000666585.1_Myco_afri_MAL010111_V1	-	MAL010111
Mycobacterium colombiense	339268	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.60902	67.5	-	MBEI01	85	5311	5120	1/18/17	4/6/17	Contig	JCVI	SAMN04634270	GCA_001953985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/985/GCA_001953985.1_ASM195398v1	-	NS-7390
Melissococcus plutonius	33970	PRJNA263547	263547	Terrabacteria group	Firmicutes	2.0476	31.1	-	JSBF01	14	1784	1595	7/7/15	4/3/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03103714	GCA_001047595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/595/GCA_001047595.1_ASM104759v1	-	82
Gallibacterium anatis	750	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.54591	39.5	-	JPTU01	96	2396	2255	11/5/14	4/2/17	Contig	University of Copenhagen	SAMN02900744	GCA_000772275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/275/GCA_000772275.1_ASM77227v1	-	10672/9
Leptospira noguchii	28182	PRJNA257151	257151	Spirochaetes	Spirochaetia	4.62215	35.6	-	JQRE01	595	4102	3671	2/24/16	4/11/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947958	GCA_001569225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/225/GCA_001569225.1_ASM156922v1	26833181	56271
Leptospira weilii	28184	PRJNA257145	257145	Spirochaetes	Spirochaetia	4.37566	40.6	-	JQRP01	352	4330	3947	2/24/16	4/5/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947786	GCA_001569385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/385/GCA_001569385.1_ASM156938v1	26833181	56621
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98833	64.1	-	FRZS01	31	4950	4801	12/14/16	3/21/17	Contig	SC	SAMEA2070538	GCA_900131035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/035/GCA_900131035.1_10665_3_48	-	218
Aeromonas veronii	654	PRJNA296464	296464	Proteobacteria	Gammaproteobacteria	4.68027	58.6	-	LKJV01	58	4347	4123	11/19/15	4/4/17	Contig	Texas Tech University	SAMN04099656	GCA_001446635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/635/GCA_001446635.1_ASM144663v1	26824353	TTU2014-125ASC
Corynebacterium ulcerans	65058	PRJNA290981	290981	Terrabacteria group	Actinobacteria	2.49268	53.3	-	LGSX01	40	2293	2153	9/24/15	4/4/17	Contig	Federal University of Minas Gerais	SAMN03938367	GCA_001298275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/275/GCA_001298275.1_ASM129827v1	27034486	Apr-11
Leuconostoc pseudomesenteroides	33968	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.98207	39	-	MPBB01	118	2068	1865	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981494	GCA_002092295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/295/GCA_002092295.1_ASM209229v1	28217118	LMGTW8
Klebsiella aerogenes UCI 16	1400139	PRJNA219266	219266	Proteobacteria	Gammaproteobacteria	5.33129	55	-	JCKY01	4	5246	4989	2/3/14	4/6/17	Scaffold	Broad Institute	SAMN02356596	GCA_000534315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/315/GCA_000534315.1_Ente_aero_UCI_16_V1	-	UCI 16
Streptobacillus moniliformis	34105	PRJNA319313	319313	Fusobacteria	Fusobacteriia	1.66759	26	-	LXKD01	308	1516	1385	6/3/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04892914	GCA_001655995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/995/GCA_001655995.1_ASM165599v1	-	NCTC 11941
Aeromonas caviae	648	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.51752	61.7	-	JTBK01	1	4077	3342	11/14/14	7/6/17	Contig	US Food and Drug Administration 	SAMN02934523	GCA_000783775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/775/GCA_000783775.1_ASM78377v1	-	FDAARGOS_72
Xanthomonas perforans	442694	PRJNA276617	276617	Proteobacteria	Gammaproteobacteria	5.34968	64.6	-	JZVI01	78	4843	4528	5/18/15	4/3/17	Contig	Universidade de Sao Paulo	SAMN03378982	GCA_001009765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/765/GCA_001009765.1_v1	26089818	Xp18-15
Streptococcus cristatus	45634	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.19041	40.4	-	JUTP01	149	2145	2017	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197981	GCA_001074345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/345/GCA_001074345.1_ASM107434v1	26230489	771_SOLI
Streptococcus pseudopneumoniae	257758	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.77223	39.4	-	JUUZ01	35	1771	1706	7/10/15	4/3/17	Contig	University of Washington	SAMN03197945	GCA_001074155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/155/GCA_001074155.1_ASM107415v1	26230489	74_SPSE
Kingella kingae D7330	1305781	PRJEB1633	194493	Proteobacteria	Betaproteobacteria	1.99279	46.7	-	CBRY01	1	1960	1678	9/10/13	4/2/17	Scaffold	URMITE	SAMEA2272369	GCA_000470035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/035/GCA_000470035.1_D7330	-	D7330
Streptococcus parauberis	1348	PRJNA273857	273857	Terrabacteria group	Firmicutes	2.01196	35.4	-	LQRN01	17	2019	1902	2/1/17	4/6/17	Contig	Norfolk State University	SAMN04231484	GCA_001983285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/285/GCA_001983285.1_T1_100X_V1	-	T1
Vibrio anguillarum	55601	PRJNA267071	267071	Proteobacteria	Gammaproteobacteria	4.10008	44.8226	chromosome I:CP010036.1; chromosome II:CP010037.1	-	2	3489	3359	2/7/17	2/7/17	Chromosome	University of Copenhagen	SAMN03177548	GCA_001989675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/675/GCA_001989675.1_ASM198967v1	-	A023
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.93858	55	-	JTCA02	77	4895	4642	11/17/14	3/25/17	Contig	JCVI	SAMN03012826	GCA_000784055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/055/GCA_000784055.2_SPADES_assembly_of_Enterobacter_cloacae_ND13	-	ND13
Actinomyces oris	544580	PRJNA347929	347929	Terrabacteria group	Actinobacteria	2.97638	68.8	-	MSKV01	45	2502	2394	1/5/17	4/6/17	Scaffold	King's College London	SAMN05898718	GCA_001937545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/545/GCA_001937545.1_ASM193754v1	-	W11-1-1
Haemophilus parainfluenzae	729	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	2.02873	39.4	-	JVSL01	41	2019	1925	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197335	GCA_001053575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/575/GCA_001053575.1_ASM105357v1	26230489	146_HPAR
Agrobacterium sp. JL28	1336742	PRJNA205088	205088	Proteobacteria	Alphaproteobacteria	5.64445	59.8	-	ASXZ01	58	5425	5129	1/22/16	4/11/17	Contig	Huazhong Agricultural University	SAMN04395161	GCA_001526565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/565/GCA_001526565.1_ASM152656v1	-	JL28
Streptococcus parasanguinis	1318	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.10931	41.7	-	JUPF01	180	2008	1929	7/10/15	4/3/17	Contig	University of Washington	SAMN03198095	GCA_001074855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/855/GCA_001074855.1_ASM107485v1	26230489	889_SPAR
Fusobacterium necrophorum subsp. funduliforme	143387	PRJNA315619	315619	Fusobacteria	Fusobacteriia	2.23195	35.3	-	LVEQ01	36	2194	2072	3/25/16	4/5/17	Contig	Aarhus University	SAMN04566683	GCA_001597305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/305/GCA_001597305.1_ASM159730v1	-	LS_1195
[Clostridium] clostridioforme	1531	PRJEB15882	347962	Terrabacteria group	Firmicutes	5.22572	49.1	-	FOIO01	164	5241	4790	10/29/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216521	GCA_900100685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/685/GCA_900100685.1_IMG-taxon_2654588145_annotated_assembly	-	NLAE-zl-C196
Citrobacter freundii	546	PRJNA273931	273931	Proteobacteria	Gammaproteobacteria	5.76324	51.4	-	JYFY02	16	5874	5549	3/3/15	4/3/17	Scaffold	Walter Reed Army Institute of Research	SAMN03316839	GCA_000937455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/455/GCA_000937455.2_ASM93745v2	-	MRSN 11938
Leptospira santarosai str. AIM	1193056	PRJNA167236	167236	Spirochaetes	Spirochaetia	4.0712	41.7	-	AKWT02	72	4075	3731	10/17/12	4/1/17	Contig	J. Craig Venter Institute	SAMN02436390	GCA_000306455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/455/GCA_000306455.2_gls454070v02	-	AIM
Streptococcus gallolyticus	315405	PRJEB16028	348501	Terrabacteria group	Firmicutes	2.17677	37.5	-	FNFJ01	14	2134	2040	10/20/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487842	GCA_900101135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/135/GCA_900101135.1_IMG-taxon_2608642220_annotated_assembly	-	VTM3R42
Lysinibacillus fusiformis	28031	PRJNA348753	348753	Terrabacteria group	Firmicutes	4.47199	37.5	-	DGKR01	35	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455506	GCA_002387075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/075/GCA_002387075.1_ASM238707v1	28894102	-
Chlamydia trachomatis L2b/8200/07	1071773	PRJEA71107	71107	PVC group	Chlamydiae	1.04636	41.2634	chromosome:NC_020945.1/HE601795.1; plasmid pL2b820007:NC_020984.1/HE603222.1	-	2	974	903	3/13/12	3/23/17	Complete Genome	Sanger Institute	SAMEA2272637	GCA_000318905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/905/GCA_000318905.1_ASM31890v1	22406642	L2b/8200/07
Pantoea ananatis	553	PRJNA287251	287251	Proteobacteria	Gammaproteobacteria	4.59997	53.0571	plasmid CFH1-7plasmid1:NZ_CM003365.1/CM003365.1; plasmid CFH1-7plasmid2:NZ_CM003366.1/CM003366.1	LFLX01	5	4381	4147	7/22/15	4/10/17	Contig	USDA-ARS	SAMN03779113	GCA_001187705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/705/GCA_001187705.1_ASM118770v1	26358602	CFH 7-1
Streptococcus anginosus 1505	1163301	PRJDB78	219078	Terrabacteria group	Firmicutes	2.08978	38.6	-	BASW01	52	2053	1898	9/7/13	4/2/17	Contig	"Pediatric Dentistry, Tokyo Dental College"	SAMD00036761	GCA_000474115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/115/GCA_000474115.1_ASM47411v1	-	1505
Staphylococcus lugdunensis	28035	PRJNA380729	380729	Terrabacteria group	Firmicutes	2.667	33.6997	chromosome:NZ_CP020769.1/CP020769.1; plasmid pVISLISI_3:NZ_CP020770.1/CP020770.1	-	2	2584	2465	4/18/17	5/1/17	Chromosome	EA7290	SAMN06646534	GCA_002104555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/555/GCA_002104555.1_ASM210455v1	-	VISLISI_33
Riemerella anatipestifer	34085	PRJNA308362	308362	FCB group	Bacteroidetes/Chlorobi group	2.19865	35	-	LUDU01	37	2095	2028	3/11/16	4/5/17	Contig	Sichuan Agricultural University	SAMN04394634	GCA_001589345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/589/345/GCA_001589345.1_RCAD0122	27151800	RCAD0122
Bacillus cytotoxicus	580165	PRJEB14962	336312	Terrabacteria group	Firmicutes	4.13514	35.5	-	FMIK01	80	4362	3970	8/25/16	5/31/17	Scaffold	INRA-MIG	SAMEA4361471	GCA_900095655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/655/GCA_900095655.1_ASM90009565v1	-	AFSSA_08CEB44bac
Acinetobacter pittii	48296	PRJNA255268	255268	Proteobacteria	Gammaproteobacteria	4.35745	38.7	-	JRQZ01	134	4326	4056	12/19/14	4/2/17	Contig	The University of Queensland	SAMN03080629	GCA_000805655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/655/GCA_000805655.1_ASM80565v1	-	T167
Xanthomonas euvesicatoria	456327	PRJNA266603	266603	Proteobacteria	Gammaproteobacteria	5.30694	64.6	-	JSZG01	384	4887	4294	12/16/14	4/2/17	Contig	Institut de Recherche pour le Developpement	SAMN03164128	GCA_000802325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/325/GCA_000802325.1_XEU_66b_E1.0	25657284	66b
Pseudomonas amygdali pv. aesculi	251722	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.83123	58.2	-	LJPN01	657	5479	4536	10/20/15	8/8/17	Scaffold	University of Toronto	SAMN03976300	GCA_001400675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/675/GCA_001400675.1_PaeICMP8947	-	ICMP8947
Brucella sp. UK1/97	437663	PRJNA173608	173608	Proteobacteria	Alphaproteobacteria	3.30764	57.3	-	AQKV01	54	3384	3141	4/16/13	4/17/17	Scaffold	Broad Institute	SAMN00811226	GCA_000371045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/045/GCA_000371045.1_Bruc_sp_UK1_97_V1	-	UK1/97
Enterobacter asburiae	61645	PRJNA271006	271006	Proteobacteria	Gammaproteobacteria	5.17003	55	-	JZKO01	231	5228	4860	3/30/15	4/3/17	Contig	JCVI	SAMN03277191	GCA_000966005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/005/GCA_000966005.1_ASM96600v1	-	CIDEIMsCOL4
Chlamydia trachomatis L2b/795	1071777	PRJEA71115	71115	PVC group	Chlamydiae	1.04622	41.2634	chromosome:NC_020938.1/HE601949.1; plasmid pL2b795:NC_020983.1/HE603221.1	-	2	973	902	3/13/12	3/23/17	Complete Genome	Sanger Institute	SAMEA2272281	GCA_000318985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/985/GCA_000318985.1_ASM31898v1	22406642	L2b/795
Pediococcus acidilactici	1254	PRJNA296933	296933	Terrabacteria group	Firmicutes	1.98017	42	-	LNUM01	59	1980	1790	12/4/15	4/4/17	Contig	"Shin's Lab., Kyungpook National University"	SAMN04111307	GCA_001461015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/461/015/GCA_001461015.1_ASM146101v1	-	S1
Vibrio alginolyticus 40B	674977	PRJNA40359	40359	Proteobacteria	Gammaproteobacteria	5.14468	44.6	-	ACZB01	188	4945	4350	11/23/09	5/19/17	Contig	LNCC/UFRJ/CBS	SAMN02470249	GCA_000176055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/055/GCA_000176055.1_ASM17605v1	19860885	40B
Acinetobacter lwoffii	28090	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.88505	43.3	-	DDAT01	52	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452157	GCA_002332985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/985/GCA_002332985.1_ASM233298v1	28894102	-
Pseudoalteromonas sp. BSi20495	386429	PRJDA74515	74515	Proteobacteria	Gammaproteobacteria	4.82652	38.9	-	BADY01	222	4264	4003	10/26/11	5/19/17	Contig	Shandong University	SAMD00036594	GCA_000241185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/185/GCA_000241185.2_PspBSi20495_1.0	22275105	BSi20495
Acinetobacter junii	40215	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.68726	38.3	-	DFWQ01	297	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453741	GCA_002380985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/985/GCA_002380985.1_ASM238098v1	28894102	-
Acinetobacter calcoaceticus	471	PRJDB2977	271862	Proteobacteria	Gammaproteobacteria	4.05882	38.5	-	BBQU01	44	3866	3711	1/7/15	4/2/17	Contig	Hokkaido University	SAMD00023354	GCA_000818215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/215/GCA_000818215.1_ASM81821v1	-	P23
Pseudomonas savastanoi pv. nerii	360921	PRJNA287460	287460	Proteobacteria	Gammaproteobacteria	5.79358	58.2	-	LIHX01	242	5553	4965	1/25/16	4/4/17	Contig	University of Edinburgh	SAMN03992215	GCA_001535815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/815/GCA_001535815.1_ASM153581v1	27145446	CFBP 5067
Pseudomonas syringae pv. berberidis	251704	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	6.26321	58.5	-	LJPU01	341	5898	5366	10/20/15	4/4/17	Scaffold	University of Toronto	SAMN03976296	GCA_001401405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/405/GCA_001401405.1_PbbICMP4116	-	ICMP4116
Xanthomonas fuscans subsp. fuscans	366649	PRJNA264809	264809	Proteobacteria	Gammaproteobacteria	5.15007	64.8	-	JSEV02	134	4655	4125	11/10/14	4/3/17	Contig	University of Exeter	SAMN03142809	GCA_000786945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/945/GCA_000786945.2_NCPPB1056v2	26500625	NCPPB 1056
Achromobacter xylosoxidans	85698	PRJNA285410	285410	Proteobacteria	Betaproteobacteria	6.40378	67.7	-	LDVJ01	511	6038	5700	8/31/15	4/4/17	Contig	University of Queensland	SAMN03753628	GCA_001276005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/005/GCA_001276005.1_ASM127600v1	-	A-8
Streptococcus oralis	1303	PRJNA304333	304333	Terrabacteria group	Firmicutes	2.12979	40.8	-	LQZB01	29	2149	1887	3/2/16	4/5/17	Scaffold	University of Kaiserslautern	SAMN04325051	GCA_001579175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/175/GCA_001579175.1_ASM157917v1	27303717	DD24
Streptomyces griseus subsp. griseus	67263	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.04222	72.6	-	JOIT01	86	7011	6697	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645514	GCA_000721575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/575/GCA_000721575.1_ASM72157v1	-	NRRL F-2227
Acinetobacter nosocomialis	106654	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	4.04027	38.6	-	BBTO01	70	3875	3689	2/17/15	4/3/17	Contig	National Institute of Technology and Evaluation	SAMD00020345	GCA_000931775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/775/GCA_000931775.1_ASM93177v1	-	NBRC 110501
Ruminococcus flavefaciens	1265	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.53682	46.9	-	DBXO01	58	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06453156	GCA_002309635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/635/GCA_002309635.1_ASM230963v1	28894102	-
Klebsiella variicola	244366	PRJNA234116	234116	Proteobacteria	Gammaproteobacteria	5.96038	56.3	-	JMZK01	16	5631	4995	5/19/14	8/1/17	Scaffold	Broad Institute	SAMN02581249	GCA_000694735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/735/GCA_000694735.1_Kleb_pneu_MGH_76_V1	-	MGH 76
Bacillus atrophaeus ATCC 9372-2	723892	PRJNA46211	46211	Terrabacteria group	Firmicutes	4.12744	43.1	-	AEFU01	32	4197	3999	4/19/11	6/15/17	Contig	Transformational Medical Technologies Program	SAMN01816424	GCA_000204825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/825/GCA_000204825.2_ASM20482v2	21464989	ATCC 9372-2
Lactobacillus iners UPII 60-B	928328	PRJNA60375	60375	Terrabacteria group	Firmicutes	1.32361	32.7	-	AEXK01	31	1290	1204	3/7/11	3/30/17	Contig	J. Craig Venter Institute	SAMN00138212	GCA_000191705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/705/GCA_000191705.2_ASM19170v1	-	UPII 60-B
Rhodococcus hoagii	43767	PRJNA316970	316970	Terrabacteria group	Actinobacteria	5.09242	68.8	-	LWTP01	31	4765	4650	4/17/17	6/6/17	Contig	The University of Edinburgh	SAMN04871681	GCA_002094235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/235/GCA_002094235.1_ASM209423v1	27638249	PAM1643
Acinetobacter radioresistens	40216	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.00062	41.7	-	DBUM01	33	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06450811	GCA_002307975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/975/GCA_002307975.1_ASM230797v1	28894102	-
Staphylococcus warneri	1292	PRJNA278415	278415	Terrabacteria group	Firmicutes	2.54944	32.4	-	LDTS01	145	2490	2368	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401353	GCA_001477375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/375/GCA_001477375.1_ASM147737v1	26793183	SA10
Staphylococcus capitis	29388	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.52276	32.8	-	JUPO01	114	2412	2339	7/10/15	4/3/17	Contig	University of Washington	SAMN03198086	GCA_001074775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/775/GCA_001074775.1_ASM107477v1	26230489	880_SEPI
Staphylococcus hominis	1290	PRJNA290680	290680	Terrabacteria group	Firmicutes	2.30132	31.6	-	LHPB01	103	2252	2130	9/22/15	4/4/17	Contig	Monash University Malaysia	SAMN03895993	GCA_001297105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/105/GCA_001297105.1_ASM129710v1	26586879	RIT-PI-k
Lactobacillus paracasei subsp. paracasei Lpp46	1256222	PRJNA178451	178451	Terrabacteria group	Firmicutes	2.93202	46.3	-	ANMJ01	90	3049	2841	6/11/13	4/1/17	Contig	Danone Research	SAMN02469709	GCA_000409875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/875/GCA_000409875.1_Lpp46.v.1	23894338	Lpp46
Bifidobacterium pseudocatenulatum	28026	PRJNA379831	379831	Terrabacteria group	Actinobacteria	2.19747	56.2	-	NAQD01	15	1808	1673	3/31/17	4/6/17	Contig	University of Parma	SAMN06621714	GCA_002075945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/945/GCA_002075945.1_Bbif1896B	-	1896B
Gardnerella vaginalis JCP8066	1261064	PRJNA181319	181319	Terrabacteria group	Actinobacteria	1.52073	42.2	-	ATJL01	144	1311	1114	6/25/13	4/1/17	Scaffold	Washington University	SAMN02436710	GCA_000414565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/565/GCA_000414565.1_ASM41456v1	-	JCP8066
Lactobacillus ruminis	1623	PRJEB16895	350950	Terrabacteria group	Firmicutes	1.84233	39.9	-	FOCC01	28	1870	1740	10/29/16	4/10/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216431	GCA_900110005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/005/GCA_900110005.1_IMG-taxon_2654588114_annotated_assembly	-	WC1T17
Lactobacillus jensenii 269-3	596325	PRJNA34097	34097	Terrabacteria group	Firmicutes	1.68827	34.4	-	ACOY01	57	1588	1508	6/3/09	3/30/17	Contig	J. Craig Venter Institute	SAMN00001905	GCA_000175035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/035/GCA_000175035.1_ASM17503v1	-	269-3
Nostoc sp. PCC 7120	103690	PRJNA244	244	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.21179	41.2243	chromosome:NC_003272.1/BA000019.2; plasmid pCC7120alpha:NC_003276.1/BA000020.2; plasmid pCC7120beta:NC_003240.1/AP003602.1; plasmid pCC7120delta:NC_003273.1/AP003604.1; plasmid pCC7120epsilon:NC_003270.1/AP003605.1; plasmid pCC7120gamma:NC_003267.1/AP003603.1; plasmid pCC7120zeta:NC_003241.1/AP003606.1	-	7	6126	5842	11/28/01	4/17/17	Complete Genome	Kazusa	SAMD00061094	GCA_000009705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/705/GCA_000009705.1_ASM970v1	11759840	PCC 7120
Streptomyces albus subsp. albus	67257	PRJNA238534	238534	Terrabacteria group	Actinobacteria	12.2068	71.7	-	LMWG01	7002	8861	8031	1/7/16	1/7/16	Contig	University of Illinois	SAMN02900578	GCA_001507455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/455/GCA_001507455.1_ASM150745v1	-	NRRL B-2513
Rothia mucilaginosa	43675	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.32343	59.4	-	JVPY01	13	1829	1749	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197400	GCA_001063995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/995/GCA_001063995.1_ASM106399v1	26230489	207_RMUC
Aggregatibacter actinomycetemcomitans serotype e str. SA2876	1434264	PRJNA230865	230865	Proteobacteria	Gammaproteobacteria	2.25426	44.3	-	AZTS01	158	2302	2078	3/23/16	4/5/17	Contig	"Bumgarner laboratory, Department of Microbiology, University of Washington"	SAMN04573011	GCA_001596245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/245/GCA_001596245.1_SA2876v1.0	-	SA2876
Lactobacillus crispatus	47770	PRJNA290636	290636	Terrabacteria group	Firmicutes	2.31422	36.8	-	LJGQ01	244	2465	2244	1/26/16	4/4/17	Contig	Vaginal Microbiome Consortium	SAMN03893602	GCA_001541405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/405/GCA_001541405.1_ASM154140v1	26747455	VMC4
Brachyspira hyodysenteriae	159	PRJNA272555	272555	Spirochaetes	Spirochaetia	3.11335	27	-	JXNH01	85	2756	2616	5/26/15	4/3/17	Scaffold	Murdoch University	SAMN03285449	GCA_001013035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/013/035/GCA_001013035.1_ASM101303v1	26098837	G21
Mycobacterium kansasii	1768	PRJNA317047	317047	Terrabacteria group	Actinobacteria	5.62712	66.4	-	LWCK01	173	5196	4694	4/27/16	4/5/17	Contig	University of Lodz	SAMN04599334	GCA_001632885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/885/GCA_001632885.1_Mkan_typeV_1.0	27257194	1010001493
Pectobacterium carotovorum subsp. brasiliense	180957	PRJNA259701	259701	Proteobacteria	Gammaproteobacteria	4.9266	52.2	-	JQOD01	71	4460	4299	9/15/14	4/2/17	Contig	Food and Environment Research Agency	SAMN03010640	GCA_000754705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/705/GCA_000754705.1_ASM75470v1	-	LMG 21372
Variovorax paradoxus NBRC 15149	1321610	PRJDB1090	197340	Proteobacteria	Betaproteobacteria	6.66427	67.7	-	BCUT01	16	6294	6173	2/27/16	4/5/17	Contig	National Institute of Technology and Evaluation	SAMD00046749	GCA_001591365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/365/GCA_001591365.1_ASM159136v1	-	NBRC 15149
Streptococcus equinus	1335	PRJEB16788	350916	Terrabacteria group	Firmicutes	1.9311	37.3	-	FNYU01	19	1869	1810	10/29/16	4/5/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216423	GCA_900109105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/105/GCA_900109105.1_IMG-taxon_2654588209_annotated_assembly	-	Ye01
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.72067	47.6	-	MDZV01	50	3435	3264	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320397	GCA_001882465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/465/GCA_001882465.1_ASM188246v1	-	93/5839-1
Caldicellulosiruptor bescii	31899	PRJEB20919	389541	Terrabacteria group	Firmicutes	2.96091	35.2	-	FXXF01	3	2864	2638	6/9/17	6/21/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216182	GCA_900184165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/184/165/GCA_900184165.1_IMG-taxon_2663762791_annotated_assembly	-	DSMZ 6725
Escherichia albertii	208962	PRJDB3047	301492	Proteobacteria	Gammaproteobacteria	5.01364	49.3	-	BBVJ01	145	5204	4828	11/6/15	2/25/17	Scaffold	University of Miyazaki	SAMD00026644	GCA_001514665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/665/GCA_001514665.1_ASM151466v1	26537224	NIAH_Bird_16
Mycobacterium intracellulare	1767	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.53538	67.9	-	NSFE01	75	5240	4998	9/12/17	9/14/17	Contig	University of Michigan Medical School	SAMN07528787	GCA_002292535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/535/GCA_002292535.1_ASM229253v1	-	FLAC0162
Xanthomonas albilineans	29447	PRJNA270052	270052	Proteobacteria	Gammaproteobacteria	3.79895	62.9	-	JZIL01	6	3285	3022	3/25/15	4/3/17	Contig	CIRAD	SAMN03262647	GCA_000963195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/195/GCA_000963195.1_Xal-XaFL07_1-G1	-	XaFL07-1
Lactobacillus sakei	1599	PRJNA343164	343164	Terrabacteria group	Firmicutes	2.00696	41	-	MKDD01	29	2030	1926	2/1/17	4/10/17	Contig	ETH Zurich	SAMN05717726	GCA_001981735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/735/GCA_001981735.1_ASM198173v1	-	RI-403
Lactobacillus johnsonii	33959	PRJNA377666	377666	Terrabacteria group	Firmicutes	1.7846	34.6	-	NFJY01	42	1775	1579	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473658	GCA_002160105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/105/GCA_002160105.1_ASM216010v1	-	An197
Rhodococcus erythropolis	1833	PRJNA356206	356206	Terrabacteria group	Actinobacteria	7.18411	62.3	-	MRBQ01	231	6745	6481	12/12/16	4/6/17	Contig	Institute of Ecology and Genetics of Microorganisms	SAMN06109291	GCA_001900745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/745/GCA_001900745.1_ASM190074v1	-	IEGM 267
Akkermansia muciniphila	239935	PRJEB21068	396410	PVC group	Verrucomicrobia	2.9397	55.2	-	FXXW01	120	2570	2438	7/29/17	8/7/17	Scaffold	"WAGENINGEN UNIVERSITY, LABORATORY OF SYSTEMS AND SYNTHETIC BIOLOGY."	SAMEA104102603	GCA_900184975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/184/975/GCA_900184975.1_Chimpanzee_2_2.fasta	-	-
Clostridium butyricum CWBI1009	1321950	PRJNA196989	196989	Terrabacteria group	Firmicutes	4.49162	28.5	-	ASPQ01	340	3982	3813	3/10/15	4/3/17	Contig	SCK-CEN	SAMN02143030	GCA_000949905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/905/GCA_000949905.1_CWBI1009_v1	25722742	CWBI1009
Flavobacterium psychrophilum	96345	PRJNA262099	262099	FCB group	Bacteroidetes/Chlorobi group	2.51897	32.9	-	JRWD01	128	2256	2082	12/16/14	4/2/17	Contig	Washington State University	SAMN03080593	GCA_000801615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/615/GCA_000801615.1_ASM80161v1	26377311	THC 02-90
Lysinibacillus sphaericus	1421	PRJNA253154	253154	Terrabacteria group	Firmicutes	4.52939	37.3	-	JPDL01	149	4506	4303	7/25/14	4/2/17	Scaffold	"Wuhan Institute of Virology, Chinese Academy of Sciences"	SAMN02867718	GCA_000733575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/575/GCA_000733575.1_ASM73357v1	-	LP1-G
Finegoldia magna	1260	PRJNA383659	383659	Terrabacteria group	Firmicutes	1.87226	31.9	-	NDYF01	21	1808	1695	8/7/17	8/9/17	Contig	Aarhus University	SAMN06769905	GCA_002243175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/175/GCA_002243175.1_ASM224317v1	-	12T272
Campylobacter concisus	199	PRJNA280465	280465	Proteobacteria	delta/epsilon subdivisions	1.83614	37.6	-	NEFM01	18	1890	1792	4/28/17	5/3/17	Contig	Institute of Environmental Science and Research (ESR)	SAMN03457017	GCA_002114545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/545/GCA_002114545.1_ASM211454v1	-	Lasto61.99
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.6619	67.2	-	LOTS01	114	6968	6625	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449154	GCA_001522175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/175/GCA_001522175.1_ASM152217v1	-	INT1-BP31
Propionibacterium freudenreichii	1744	PRJEB6444	270208	Terrabacteria group	Actinobacteria	2.63083	67.1	-	CDAB01	62	2303	2176	3/21/15	4/4/17	Scaffold	INRA STLO	SAMEA2826825	GCA_001369055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/369/055/GCA_001369055.1_CIRM-BIA516	-	CIRM-BIA 516
Actinobacillus pleuropneumoniae serovar 7 str. AP76	537457	PRJNA29909	29909	Proteobacteria	Gammaproteobacteria	2.34544	41.2139	chromosome:NC_010939.1/CP001091.1; plasmid ABB7_B:NC_010941.1/CP001093.1; plasmid APP7_A:NC_010942.1/CP001094.1; plasmid APP7_C:NC_010940.1/CP001092.1	-	4	2248	2092	6/10/08	3/30/17	Complete Genome	Stiftung Tieraerztliche Hochschule Hannover	SAMN02603888	GCA_000020405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/405/GCA_000020405.1_ASM2040v1	-	AP76
Pseudomonas stutzeri	316	PRJNA275697	275697	Proteobacteria	Gammaproteobacteria	4.89856	61	-	JYHV01	47	4518	4396	3/13/15	4/3/17	Scaffold	Volcani Research Center	SAMN03352191	GCA_000952685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/685/GCA_000952685.1_ASM95268v1	-	NT0128
Yersinia intermedia	631	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.71133	47.4	-	CTFA01	122	4375	4124	3/26/15	4/4/17	Scaffold	SC	SAMEA859859	GCA_001222425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/425/GCA_001222425.1_4821_8_2	-	141/02
Paenibacillus polymyxa OSY-DF	1156938	PRJNA86111	86111	Terrabacteria group	Firmicutes	5.69543	45.3	-	AIPP01	139	4978	4831	6/8/12	5/19/17	Contig	The Ohio State University	SAMN02471151	GCA_000265445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/445/GCA_000265445.1_PaePol1.0	22887654	OSY-DF
Bacillus coagulans	1398	PRJNA254940	254940	Terrabacteria group	Firmicutes	3.45862	46.4	-	JPSK01	224	3481	3242	9/19/14	4/2/17	Contig	University of Verona	SAMN02905869	GCA_000756285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/285/GCA_000756285.1_ASM75628v1	25377698	"GBI-30, 6086"
Vibrio sp. J2-4	1507977	PRJEB5888	284694	Proteobacteria	Gammaproteobacteria	5.65844	44.4	-	CCKF01	82	5006	4845	5/20/15	4/10/17	Scaffold	STATION BIOLOGIQUE DE ROSCOFF	SAMEA2593998	GCA_001243675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/675/GCA_001243675.1_VRSK4v1_PRJEB5888	-	J2-4
Staphylococcus saprophyticus	29385	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.5437	33	-	LNPG01	27	2478	2345	9/28/16	4/5/17	Contig	Tufts University	SAMN04244264	GCA_001747665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/665/GCA_001747665.1_ASM174766v1	-	725A_RS6
Streptococcus sanguinis SK1058	888822	PRJNA53185	53185	Terrabacteria group	Firmicutes	2.35283	43.2	-	AFBF01	4	2340	2236	4/5/11	3/30/17	Scaffold	Baylor College of Medicine	SAMN00253321	GCA_000195125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/125/GCA_000195125.1_ASM19512v1	-	SK1058
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.21966	36.7	-	LPRG01	21	2334	2196	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305140	GCA_001560035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/035/GCA_001560035.1_GG12_C01_05	-	GG12-C01-05
Bacillus weihenstephanensis	86662	PRJNA318337	318337	Terrabacteria group	Firmicutes	5.63199	35.2	-	LXLR01	118	5926	5480	10/12/16	4/5/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04819583	GCA_001757965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/965/GCA_001757965.1_ASM175796v1	-	GOE6
Parabacteroides distasonis	823	PRJNA377666	377666	FCB group	Bacteroidetes/Chlorobi group	5.13253	45.1	-	NFJX01	62	4304	4090	5/30/17	6/12/17	Contig	Veterinary Research Institute	SAMN06473660	GCA_002160095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/095/GCA_002160095.1_ASM216009v1	-	An199
Bifidobacterium breve JCP7499	1261072	PRJNA181327	181327	Terrabacteria group	Actinobacteria	2.36972	58.6	-	AWSX01	68	2139	1913	9/12/13	4/2/17	Scaffold	Washington University	SAMN02436887	GCA_000466545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/545/GCA_000466545.1_ASM46654v1	-	JCP7499
Streptococcus oralis subsp. tigurinus	1077464	PRJDB5718	394568	Terrabacteria group	Firmicutes	1.88901	41.2	chromosome:AP018338.1	-	1	1902	1831	7/14/17	7/14/17	Complete Genome	Osaka University	SAMD00078884	GCA_002356415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/415/GCA_002356415.1_ASM235641v1	-	osk_001
Moraxella catarrhalis O35E	857571	PRJNA49927	49927	Proteobacteria	Gammaproteobacteria	1.77642	41.7	-	AERL01	42	1669	1544	3/22/11	3/30/17	Contig	Center for Genomic Sciences	SAMN02393794	GCA_000193085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/085/GCA_000193085.2_ASM19308v2	21269504	O35E
Bacteroides vulgatus	821	PRJNA321218	321218	FCB group	Bacteroidetes/Chlorobi group	4.76137	42.4	-	MNQV01	320	4078	3703	12/23/16	12/23/16	Scaffold	None	SAMN05717227	GCA_001915605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/605/GCA_001915605.1_ASM191560v1	27819664	-
Bacillus clausii	79880	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.213	44.7	-	NPCA01	93	4170	4053	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372701	GCA_002272525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/525/GCA_002272525.1_assembly-7537-T_v1	-	7537-T
Lactobacillus salivarius	1624	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.96649	32.7	-	JUQA01	117	1914	1821	7/10/15	4/3/17	Contig	University of Washington	SAMN03198074	GCA_001066665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/665/GCA_001066665.1_ASM106666v1	26230489	866_LSAL
Streptomyces scabiei	1930	PRJNA293375	293375	Terrabacteria group	Actinobacteria	10.0736	70.3	-	MVNU01	1748	9267	7615	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06346008	GCA_002155735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/735/GCA_002155735.1_ASM215573v1	-	NRRL B-2796
Clostridium beijerinckii	1520	PRJNA322812	322812	Terrabacteria group	Firmicutes	6.25549	29.6	-	LZZK01	233	5592	5254	2/23/17	2/25/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05170533	GCA_002006405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/405/GCA_002006405.1_ASM200640v1	-	NRRL B-528
Erwinia amylovora NBRC 12687	1219359	PRJDB367	172428	Proteobacteria	Gammaproteobacteria	3.77766	53.5	-	BAYW01	46	3548	3386	5/16/14	4/2/17	Contig	National Institute of Technology and Evaluation	SAMD00016891	GCA_000696075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/075/GCA_000696075.1_ASM69607v1	-	NBRC 12687
Klebsiella oxytoca	571	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	6.14668	55	-	LEUP01	4	5908	5693	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280219	GCA_001030705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/705/GCA_001030705.1_Kleb_oxyt_CHS143_V1	-	CHS143
Cronobacter sakazakii	28141	PRJNA251803	251803	Proteobacteria	Gammaproteobacteria	4.64226	56.8	-	JOLL01	88	4562	4301	10/9/15	4/4/17	Scaffold	"Nottingham Trent University, UK"	SAMN02840770	GCA_001309115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/115/GCA_001309115.1_ASM130911v1	26438044	700
Streptococcus suis	1307	PRJNA325429	325429	Terrabacteria group	Firmicutes	2.06793	41.2	chromosome:NZ_CP016175.1/CP016175.1	-	1	2083	1956	6/12/17	6/14/17	Complete Genome	Huazhong Agricultural University	SAMN05231907	GCA_002189695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/695/GCA_002189695.1_ASM218969v1	-	LSM102
Proteus mirabilis C05028	1245027	PRJNA178083	178083	Proteobacteria	Gammaproteobacteria	3.81762	38.6	-	ANBT01	39	3490	3336	11/14/12	3/31/17	Scaffold	BGI-shenzhen	SAMN02470975	GCA_000313255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/255/GCA_000313255.1_Version_1_for_Proteus_mirabilis_C05028_genome	24675851	C05028
Mycoplasma bovis	28903	PRJNA306895	306895	Terrabacteria group	Tenericutes	0.943236	29.3	-	LQDB01	70	822	735	1/4/17	4/6/17	Contig	"University of California, Davis"	SAMN04366497	GCA_001929955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/955/GCA_001929955.1_ASM192995v1	-	2154MB
Brucella ovis 80/125	1169231	PRJNA173540	173540	Proteobacteria	Alphaproteobacteria	3.30333	57.2	-	AQNP01	23	3432	3054	4/16/13	4/1/17	Contig	Broad Institute	SAMN00839737	GCA_000367065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/065/GCA_000367065.1_Bruc_ovis_80_125_V1	-	80/125
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.66859	33.6	-	CUEE01	29	2634	2465	3/31/15	3/26/17	Contig	SC	SAMEA1035138	GCA_001224225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/225/GCA_001224225.1_7067_4_69	-	51-48
Sporosarcina ureae	1571	PRJNA317680	317680	Terrabacteria group	Firmicutes	3.35377	41.2	chromosome:NZ_CP015207.1/CP015207.1	-	1	3282	3139	4/20/17	4/22/17	Complete Genome	California State University Northridge	SAMN04623202	GCA_002101375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/375/GCA_002101375.1_ASM210137v1	-	P8
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.54316	67.3	-	LOWN01	68	5902	5638	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449235	GCA_001523945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/945/GCA_001523945.1_ASM152394v1	-	FL-2-5-10-S1-D0
Chromobacterium violaceum	536	PRJNA296470	296470	Proteobacteria	Betaproteobacteria	4.77464	64.5	-	LKIW01	211	4610	4241	1/11/16	4/4/17	Scaffold	University of Kansas	SAMN04096044	GCA_001510755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/755/GCA_001510755.1_ASM151075v1	26941151	Cv017
Methanosarcina thermophila CHTI-55	1434121	PRJNA230959	230959	Euryarchaeota	Methanomicrobia	3.13023	41.2	chromosome:CP009502.1	-	1	2612	2545	4/7/15	4/7/15	Complete Genome	University of Illinois at Urbana-Champaign	SAMN03074595	GCA_000969925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/925/GCA_000969925.1_ASM96992v1	-	CHTI-55
Thioploca ingrica	40754	PRJDB3057	261569	Proteobacteria	Gammaproteobacteria	4.81001	41.2	chromosome:NZ_AP014633.1/AP014633.1	-	1	4002	3839	9/19/14	4/17/17	Complete Genome	"The Institute of Low Temperature Science, Hokkaido University"	SAMD00019192	GCA_000828835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/835/GCA_000828835.1_ASM82883v1	25343513	-
Mycoplasma gallisepticum	2096	PRJNA325637	325637	Terrabacteria group	Tenericutes	0.956951	31.3	-	MAGQ01	17	790	682	6/24/16	4/5/17	Contig	University of Georgia	SAMN05282110	GCA_001676495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/495/GCA_001676495.1_ASM167649v1	-	K6356
Lactobacillus brevis	1580	PRJNA269010	269010	Terrabacteria group	Firmicutes	2.43543	45.9	-	JXCD01	99	2401	2256	2/13/15	4/3/17	Scaffold	Vavilov Institute of General Genetics	SAMN03247579	GCA_000875905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/875/905/GCA_000875905.1_ASM87590v1	25883284	15f
Methanobacterium formicicum	2162	PRJEB7090	268809	Euryarchaeota	Methanobacteria	2.47807	41.2	chromosome I:NZ_LN515531.1/LN515531.1	-	1	2434	2363	9/10/14	4/10/17	Complete Genome	CEBITEC	SAMEA2724982	GCA_000953115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/115/GCA_000953115.1_DSM1535	-	-
Streptococcus suis 05HAS68	672190	PRJNA17157	17157	Terrabacteria group	Firmicutes	2.17607	41.2	chromosome:NZ_CP002007.2/CP002007.2	-	1	2215	2024	1/9/14	3/17/17	Complete Genome	"Beijing Institute of Genomics, Chinese Academy of Sciences,"	SAMN02469350	GCA_000168355.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/355/GCA_000168355.3_ASM16835v3	"1,737,520,125,891,910"	05HAS68
Streptococcus suis SC070731	1246365	PRJNA178071	178071	Terrabacteria group	Firmicutes	2.13857	41.2	chromosome:NC_020526.1/CP003922.1	-	1	2153	2010	3/6/13	3/15/17	Complete Genome	Nanjing Agricultural University	SAMN02603632	GCA_000344765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/765/GCA_000344765.1_ASM34476v1	24316490	SC070731
Bartonella henselae	38323	PRJNA295147	295147	Proteobacteria	Alphaproteobacteria	1.86268	38	-	LNZZ01	58	1694	1474	1/4/17	4/10/17	Contig	Anses UMR BIPAR	SAMN04286621	GCA_001932095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/095/GCA_001932095.1_ASM193209v1	-	A76
Lactobacillus acidophilus	1579	PRJNA263693	263693	Terrabacteria group	Firmicutes	1.9567	34.6	-	JRUT01	20	1940	1795	11/24/14	4/2/17	Contig	Facultad Ciencias Exactas y Naturales-UBA	SAMN03105773	GCA_000786395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/395/GCA_000786395.1_ASM78639v1	25593259	ATCC 4356
Streptococcus suis A7	993512	PRJNA63483	63483	Terrabacteria group	Firmicutes	2.03841	41.2	chromosome:NC_017622.1/CP002570.1	-	1	2047	1897	11/1/11	3/15/17	Complete Genome	Huazhong Agricultural University	SAMN02603318	GCA_000233575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/575/GCA_000233575.1_ASM23357v1	22026465	A7
Streptococcus uberis B190	1450189	PRJNA234018	234018	Terrabacteria group	Firmicutes	1.88186	36.4	-	JATE01	20	1889	1807	4/22/15	4/3/17	Contig	University of Nottingham	SAMN02570397	GCA_000975545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/975/545/GCA_000975545.1_ASM97554v1	25898893	B190
Bacteroides thetaiotaomicron	818	PRJEB8299	276429	FCB group	Bacteroidetes/Chlorobi group	5.60224	44.5	-	CDQT01	2372	-	-	2/24/15	2/24/15	Contig	CGS-GL	SAMEA3217996	GCA_000937835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/835/GCA_000937835.1_3a5B_assembly	-	3a5B
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.14072	39.9	-	FPIN01	7	1029	929	5/10/17	5/24/17	Contig	WTSI	SAMEA893022	GCA_900118685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/685/GCA_900118685.1_4880_6_8	-	A-58
Leuconostoc mesenteroides P45	1429888	PRJNA260860	260860	Terrabacteria group	Firmicutes	1.87419	37.5	-	JRGZ01	6	1859	1719	9/19/14	4/2/17	Contig	"Instituto de Biotecnologia, Universidad Nacional Autonoma de Mexico"	SAMN03032191	GCA_000756355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/355/GCA_000756355.1_ASM75635v1	25377708	P45
Anaplasma phagocytophilum str. HGE2	1359159	PRJNA212466	212466	Proteobacteria	Alphaproteobacteria	1.48205	41.7	-	LAOE01	1	1175	1057	3/27/15	4/3/17	Contig	IGS	SAMN02665693	GCA_000964935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/935/GCA_000964935.1_ASM96493v1	-	HGE2
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.12282	41.5	-	JJPW01	136	3526	3321	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708954	GCA_000979045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/045/GCA_000979045.1_gtlEnvA5udCFS	25756680	3.H.M.1B.5
Chlamydia muridarum	83560	PRJNA244652	244652	PVC group	Chlamydiae	1.08045	40.3	-	JNOQ01	2	960	908	6/10/14	4/2/17	Contig	IGS	SAMN02808330	GCA_000700925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/925/GCA_000700925.1_cmvar0011	24961692	Var001.1
Streptococcus suis SS12	1005041	PRJNA65433	65433	Terrabacteria group	Firmicutes	2.09687	41.2	chromosome:NC_017619.1/CP002640.1	-	1	2136	2001	10/25/11	3/15/17	Complete Genome	Huazhong Agricultural University	SAMN02603320	GCA_000231865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/865/GCA_000231865.1_ASM23186v1	22026465	SS12
Lactobacillus gasseri	1596	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.79448	34.9	-	JVOL01	49	1718	1645	7/10/15	4/3/17	Contig	University of Washington	SAMN03197439	GCA_001063065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/065/GCA_001063065.1_ASM106306v1	26230489	249_LKEF
Gardnerella vaginalis HMP9231	1009464	PRJNA51067	51067	Terrabacteria group	Actinobacteria	1.72652	41.2	chromosome:NC_017456.1/CP002725.1	-	1	1462	1353	5/18/11	3/30/17	Complete Genome	J. Craig Venter Institute	SAMN00100736	GCA_000213955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/955/GCA_000213955.1_ASM21395v1	-	HMP9231
Streptococcus suis JS14	945704	PRJNA61797	61797	Terrabacteria group	Firmicutes	2.13743	41.2	chromosome:NC_017618.1/CP002465.1	-	1	2161	1979	1/20/11	3/15/17	Complete Genome	"Huazhong Agricultural University, Wuhan, China"	SAMN02603326	GCA_000186405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/405/GCA_000186405.1_ASM18640v1	21398551	JS14
Streptococcus gordonii	1302	PRJNA280660	280660	Terrabacteria group	Firmicutes	2.23349	40.6	-	LAWA01	33	2191	2096	3/11/16	4/5/17	Contig	University of Malaya	SAMN03480628	GCA_001588795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/795/GCA_001588795.1_ASM158879v1	-	Channon
[Haemophilus] ducreyi	730	PRJNA301153	301153	Proteobacteria	Gammaproteobacteria	1.72763	38.0094	plasmid PB1000:NZ_CM004377.1/CM004377.1	LMZZ01	27	1714	1555	12/10/15	4/5/17	Contig	Indiana University School of Medicine	SAMN04240434	GCA_001465235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/465/235/GCA_001465235.1_ASM146523v1	26847887	AUSPNG1
Actinobacillus pleuropneumoniae serovar 3 str. JL03	434271	PRJNA19135	19135	Proteobacteria	Gammaproteobacteria	2.24206	41.2	chromosome:NC_010278.1/CP000687.1	-	1	2126	1972	1/16/08	3/30/17	Complete Genome	Huazhong Agricultural University	SAMN02603312	GCA_000016685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/685/GCA_000016685.1_ASM1668v1	18197260	JL03
Mesorhizobium loti	381	PRJNA322738	322738	Proteobacteria	Alphaproteobacteria	6.8426	63.1	-	LYTK01	25	6688	6398	6/20/16	4/5/17	Contig	Curtin University	SAMN05172963	GCA_001672355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/355/GCA_001672355.1_NZP2042	-	NZP2042
Lactobacillus sakei	1599	PRJNA397368	397368	Terrabacteria group	Firmicutes	2.07552	41.1743	chromosome:NZ_CP022709.1/CP022709.1; plasmid pLBS01:NZ_CP022710.1/CP022710.1; plasmid pLBS02:NZ_CP022711.1/CP022711.1	-	3	2074	1956	8/14/17	8/16/17	Complete Genome	World Institute of Kimchi	SAMN07454401	GCA_002250035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/035/GCA_002250035.1_ASM225003v1	-	WiKim0063
Bordetella bronchiseptica 99-R-0433	1331202	PRJNA202114	202114	Proteobacteria	Betaproteobacteria	5.12219	68.3	-	JGWN01	143	4918	4710	5/1/14	4/2/17	Contig	JCVI	SAMN02263892	GCA_000662055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/055/GCA_000662055.1_gbb06v01	-	99-R-0433
Treponema denticola SP44	999439	PRJNA64929	64929	Spirochaetes	Spirochaetia	2.82474	37.9	-	AHAD01	8	2708	2570	6/19/13	4/1/17	Scaffold	Broad Institute	SAMN02596781	GCA_000413075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/075/GCA_000413075.1_Trep_dent_SP44_F0466_V1	-	SP44
Bacteroides uniformis	820	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	4.5732	46.4	-	CZAD01	81	3884	3686	10/1/15	4/4/17	Contig	SC	SAMEA3545310	GCA_001406635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/635/GCA_001406635.1_13470_2_63	-	2789STDY5834844
Bacteroides ovatus	28116	PRJEB15940	348237	FCB group	Bacteroidetes/Chlorobi group	6.00783	41.7	-	FNDO01	174	4739	4312	10/20/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192582	GCA_900100465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/465/GCA_900100465.1_IMG-taxon_2654588146_annotated_assembly	-	NLAE-zl-C57
Mannheimia haemolytica	75985	PRJNA172854	172854	Proteobacteria	Gammaproteobacteria	2.75708	41.1017	chromosome:NZ_CP023044.1/CP023044.1; plasmid pL.24464.X.191:NZ_CP023045.1/CP023045.1	-	2	2839	2661	9/5/17	9/18/17	Complete Genome	USDA-ARS-USMARC	SAMN07537192	GCA_002285575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/575/GCA_002285575.1_ASM228557v1	-	191
Clostridium sporogenes	1509	PRJNA278445	278445	Terrabacteria group	Firmicutes	4.09266	27.9	-	LLZW02	38	3911	3683	11/17/15	4/5/17	Contig	Illinois Institute of Technology	SAMN03418528	GCA_001444585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/585/GCA_001444585.2_ASM144458v2	26519392	-
Bacillus megaterium NBRC 15308 = ATCC 14581	1348623	PRJDB1311	231368	Terrabacteria group	Firmicutes	5.51395	37.8	-	BCVB01	50	5692	5438	2/27/16	4/5/17	Contig	National Institute of Technology and Evaluation	SAMD00047000	GCA_001591525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/525/GCA_001591525.1_ASM159152v1	-	NBRC 15308
Enterococcus casseliflavus	37734	PRJEB17219	351391	Terrabacteria group	Firmicutes	3.68667	42.4	-	FOMP01	28	3625	3457	10/31/16	4/5/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487887	GCA_900112655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/655/GCA_900112655.1_IMG-taxon_2623620479_annotated_assembly	-	NLAE-zl-G268
Mannheimia haemolytica	75985	PRJNA172854	172854	Proteobacteria	Gammaproteobacteria	2.75376	41.1	chromosome:NZ_CP023047.1/CP023047.1	-	1	2837	2655	9/5/17	9/18/17	Complete Genome	USDA-ARS-USMARC	SAMN07537190	GCA_002285615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/615/GCA_002285615.1_ASM228561v1	-	186
Vibrio splendidus	29497	PRJNA349813	349813	Proteobacteria	Gammaproteobacteria	5.49506	44.3	-	MNLE01	82	4866	4740	4/3/17	4/5/17	Contig	University of Copenhagen	SAMN05933175	GCA_002078155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/155/GCA_002078155.1_ASM207815v1	-	VaAn
Mannheimia haemolytica	75985	PRJNA172854	172854	Proteobacteria	Gammaproteobacteria	2.75376	41.1	chromosome:NZ_CP023043.1/CP023043.1	-	1	2841	2647	9/5/17	9/18/17	Complete Genome	USDA-ARS-USMARC	SAMN07537193	GCA_002285815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/815/GCA_002285815.1_ASM228581v1	-	193
Lactobacillus rhamnosus	47715	PRJNA314166	314166	Terrabacteria group	Firmicutes	2.90389	46.7	chromosome:NZ_CP014645.1/CP014645.1	-	1	2895	2734	3/14/16	4/5/17	Chromosome	The University of Hong Kong	SAMN04530063	GCA_001590655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/590/655/GCA_001590655.1_ASM159065v1	-	ASCC 290
Streptococcus suis	1307	PRJNA383459	383459	Terrabacteria group	Firmicutes	2.09597	41.1	chromosome:NZ_CP020863.1/CP020863.1	-	1	2107	1976	4/26/17	5/1/17	Complete Genome	Huazhong Agricultural University	SAMN06765615	GCA_002111405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/405/GCA_002111405.1_ASM211140v1	20554247	SC19
Haemophilus parasuis D74	1275971	PRJNA184684	184684	Proteobacteria	Gammaproteobacteria	2.22957	39.7	-	APBZ01	68	2169	1934	8/7/13	4/1/17	Contig	Iowa State University	SAMN02470066	GCA_000444665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/665/GCA_000444665.1_ASM44466v1	24051319	D74
Helicobacter pullorum	35818	PRJNA251890	251890	Proteobacteria	delta/epsilon subdivisions	1.81417	34.2352	plasmid plasmid_229336_12:NZ_CM003496.1/CM003496.1	JNUR01	91	1791	1704	9/24/15	4/10/17	Scaffold	"National Institute of Health, Portugal"	SAMN02841093	GCA_001298045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/045/GCA_001298045.1_ASM129804v1	-	229336/12
Streptococcus equi subsp. zooepidemicus Sz57	1381087	PRJNA214018	214018	Terrabacteria group	Firmicutes	2.02238	41.5	-	JAUA01	78	1940	1816	2/17/15	3/25/17	Contig	Copenhagen University	SAMN02298720	GCA_000876375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/375/GCA_000876375.1_ASM87637v1	-	Sz57
Micrococcus luteus	1270	PRJNA375758	375758	Terrabacteria group	Actinobacteria	2.56841	73	-	NCXE01	93	2384	2233	8/29/17	8/30/17	Contig	SysMilk	SAMN06718497	GCA_002276855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/855/GCA_002276855.1_ASM227685v1	-	KR
Alteromonas macleodii	28108	PRJNA328503	328503	Proteobacteria	Gammaproteobacteria	4.89027	44.5	-	MBSN01	55	4253	4176	8/16/17	8/16/17	Contig	University of Southern California	SAMN05374556	GCA_002271865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/865/GCA_002271865.1_ASM227186v1	28440800	-
Bifidobacterium bifidum	1681	PRJNA263318	263318	Terrabacteria group	Actinobacteria	2.2231	62.8	-	JSDV01	10	1890	1687	6/5/15	4/10/17	Contig	University of Parma	SAMN03097401	GCA_001020245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/245/GCA_001020245.1_Bbif04v4	25523018	A8
Yersinia kristensenii	28152	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.57714	47.5	-	CGCG01	46	4230	4048	3/15/15	4/4/17	Scaffold	SC	SAMEA859878	GCA_001319625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/625/GCA_001319625.1_4821_8_9	-	IP24139
Yersinia frederiksenii	29484	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.92349	47.6	-	CQBR01	38	4572	4375	3/22/15	4/3/17	Scaffold	SC	SAMEA859962	GCA_001147425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/425/GCA_001147425.1_4821_5_9	-	FCF343
Bacillus mycoides	1405	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.64176	35.3	-	MUAK01	401	5919	5498	3/3/17	3/6/17	Contig	Cornell University	SAMN06242075	GCA_002014545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/545/GCA_002014545.1_ASM201454v1	-	FSL M7-0669
Comamonas testosteroni	285	PRJNA217291	217291	Proteobacteria	Betaproteobacteria	5.74384	61.2	-	AWTN01	169	5419	5176	10/1/14	4/2/17	Contig	Huazhong Agricultural University	SAMN03085423	GCA_000761335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/335/GCA_000761335.1_CJL14	-	JL14
Stenotrophomonas maltophilia Ab55555	1183154	PRJNA164599	164599	Proteobacteria	Gammaproteobacteria	4.91893	66.1	-	ALOG01	6	4567	4427	8/15/12	5/19/17	Scaffold	Broad Institute	SAMN02596924	GCA_000287935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/935/GCA_000287935.1_Sten_malt_Ab55555_V1	-	Ab55555
Streptococcus suis	1307	PRJNA359165	359165	Terrabacteria group	Firmicutes	2.09403	41.1	chromosome:NZ_CP018908.1/CP018908.1	-	1	2096	1984	1/5/17	3/21/17	Complete Genome	Jiangsu Academy of Agricultural Sciences	SAMN06187704	GCA_001936415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/415/GCA_001936415.1_ASM193641v1	-	SS2-1
Streptococcus sp. NPS 308	1902136	PRJDB5166	348612	Terrabacteria group	Firmicutes	1.92473	41.1	chromosome:AP017652.1	-	1	1903	1828	10/14/16	10/14/16	Complete Genome	"Department of Pediatric Dentistry, Nagasaki University Graduate School of Biomedical Sciences"	SAMD00061134	GCA_002355895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/895/GCA_002355895.1_ASM235589v1	-	NPS 308
Streptococcus suis	1307	PRJNA295196	295196	Terrabacteria group	Firmicutes	2.14615	41.1	chromosome:NZ_CP012731.1/CP012731.1	-	1	2192	2020	4/5/16	4/27/17	Complete Genome	Illinois Institute of Technology	SAMN04044079	GCA_001610935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/935/GCA_001610935.1_ASM161093v1	-	90-1330
Actinobacillus pleuropneumoniae serovar 8	754345	PRJEB10028	297415	Proteobacteria	Gammaproteobacteria	2.33763	41.1	chromosome I:NZ_LN908249.1/LN908249.1	-	1	2247	2106	11/19/15	4/4/17	Complete Genome	UNIVERSITY OF SHEFFIELD	SAMEA3643860	GCA_001460855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/460/855/GCA_001460855.1_MIDG2331	-	-
Methanobacterium formicicum	2162	PRJEB7298	302394	Euryarchaeota	Methanobacteria	2.49451	41.1	chromosome I:NZ_LN734822.1/LN734822.1	-	1	2426	2347	11/16/15	4/11/17	Complete Genome	CEBITEC	SAMEA2779801	GCA_001458655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/655/GCA_001458655.1_Mb9	-	-
Streptococcus mutans TCI-123	1074119	PRJNA71989	71989	Terrabacteria group	Firmicutes	1.8905	36.8	-	AGKL01	109	1914	1802	10/6/11	3/22/17	Contig	JCVI	SAMN02436600	GCA_000228865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/865/GCA_000228865.2_SMUT4-NEX_8-123	-	TCI-123
Borrelia garinii IPT75	1408825	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.20596	28	-	AYAA01	183	1154	665	12/3/13	4/2/17	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378792	GCA_000501595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/595/GCA_000501595.1_BorGarIPT75	-	IPT75
Streptococcus dysgalactiae subsp. equisimilis	119602	PRJNA270797	270797	Terrabacteria group	Firmicutes	2.08601	39.4	-	LDYC01	77	2111	1977	6/23/15	4/3/17	Contig	"West China Hospital, Sichuan University"	SAMN03268887	GCA_001038445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/445/GCA_001038445.1_ASM103844v1	26843282	WCHSDSE-1
Methanobrevibacter smithii TS94B	911127	PRJNA59671	59671	Euryarchaeota	Methanobacteria	1.88602	30.3	-	AELV01	58	1811	1635	2/17/11	3/30/17	Contig	Washington University in St.Louis	SAMN02436674	GCA_000190015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/015/GCA_000190015.2_ASM19001v2	21317366	TS94B
Microcystis aeruginosa CHAOHU 1326	1914535	PRJNA349200	349200	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.27168	42.5	-	MOLZ01	607	5278	4563	12/9/16	4/6/17	Scaffold	Shandong University	SAMN05928532	GCA_001895325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/325/GCA_001895325.1_ASM189532v1	-	CHAOHU 1326
Bradyrhizobium japonicum CCBAU 15354	1128253	PRJNA77219	77219	Proteobacteria	Alphaproteobacteria	10.1266	63.3	-	AJPX01	951	10250	8898	5/3/12	5/18/17	Contig	China Agricultural University	SAMN02469475	GCA_000261545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/545/GCA_000261545.1_15354	22586130	CCBAU 15354
Streptococcus suis	1307	PRJNA283547	283547	Terrabacteria group	Firmicutes	2.25535	41.1	chromosome:NZ_CP011419.1/CP011419.1	-	1	2324	2146	8/21/15	3/18/17	Complete Genome	Public Health Ontario	SAMN03652427	GCA_001272635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/635/GCA_001272635.1_ASM127263v1	26375680	NSUI002
Streptococcus suis	1307	PRJNA242223	242223	Terrabacteria group	Firmicutes	2.0949	41.1	chromosome:NZ_CP007497.1/CP007497.1	-	1	2106	1976	5/7/15	3/17/17	Complete Genome	Nanjing Agricultural University	SAMN02691834	GCA_000993745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/745/GCA_000993745.1_ASM99374v1	-	ZY05719
Brucella canis CNGB 1172	1198686	PRJNA176526	176526	Proteobacteria	Alphaproteobacteria	3.22834	57.2	-	AQMY01	2	3266	3068	4/17/13	4/1/17	Contig	Broad Institute	SAMN01047737	GCA_000367265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/265/GCA_000367265.1_Bruc_cani_CNGB_1172_V1	-	CNGB 1172
Clavibacter michiganensis	28447	PRJNA331201	331201	Terrabacteria group	Actinobacteria	3.26827	73.6	-	MDHJ01	1	3100	2552	5/19/17	8/4/17	Contig	University of California	SAMN05439586	GCA_002150995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/995/GCA_002150995.1_ASM215099v1	-	CASJ009
Rhizobium leguminosarum bv. viciae Vc2	1090946	PRJNA169724	169724	Proteobacteria	Alphaproteobacteria	7.80717	60.7	-	ARDP01	142	7589	7174	4/19/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02441371	GCA_000373285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/285/GCA_000373285.1_ASM37328v1	-	Vc2
Treponema pallidum subsp. pallidum	161	PRJNA271237	271237	Spirochaetes	Spirochaetia	1.13972	52.8	chromosome:NZ_CP010559.1/CP010559.1	-	1	1066	1003	6/3/16	4/5/17	Chromosome	University of Washington	SAMN03273364	GCA_001655275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/275/GCA_001655275.1_ASM165527v1	-	CDC-A
Borrelia burgdorferi 118a	476210	PRJNA21001	21001	Spirochaetes	Spirochaetia	1.45301	28.2096	plasmid 118a_cp26:NC_012261.1/CP001535.1; plasmid 118a_cp32-10:NC_012257.1/CP001534.1; plasmid 118a_cp32-13:NC_012264.1/CP001543.1; plasmid 118a_cp32-4:NC_012268.1/CP001538.1; plasmid 118a_cp32-5:NC_012262.1/CP001536.1; plasmid 118a_cp32-6:NC_012266.1/CP001528.1; plasmid 118a_cp32-7-9:NC_012253.1/CP001526.1; plasmid 118a_cp32-8:NC_012251.1/CP001525.1; plasmid 118a_cp9:NC_012256.1/CP001533.1; plasmid 118a_lp17:NC_012243.1/CP001527.1; plasmid 118a_lp25:NC_012238.1/CP001532.1; plasmid 118a_lp28-3:NC_012236.1/CP001540.1; plasmid 118a_lp28-4:NC_012240.1/CP001541.1; plasmid 118a_lp28-5:NC_012248.1/CP001529.1; plasmid 118a_lp28-6:NC_012233.1/CP001531.1; plasmid 118a_lp32-3:NC_012229.1/CP001530.1; plasmid 118a_lp36:NC_012245.1/CP001537.1; plasmid 118a_lp38:NC_012232.1/CP001539.1; plasmid 118a_lp54:NC_012241.1/CP001542.1	ABGI02	27	1526	1411	10/10/07	3/30/17	Contig	J. Craig Venter Institute	SAMN02436228	GCA_000171735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/735/GCA_000171735.2_ASM17173v2	-	118a
Burkholderia multivorans	87883	PRJNA239698	239698	Proteobacteria	Betaproteobacteria	6.66888	67.1	-	JFHP01	15	6287	6017	12/26/14	4/2/17	Contig	Instituto Superior Tecnico	SAMN02666802	GCA_000807825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/825/GCA_000807825.1_D2095.1	25676757	D2095
Methanosarcina thermophila TM-1	523844	PRJNA230961	230961	Euryarchaeota	Methanomicrobia	3.12738	41.1	chromosome:NZ_CP009501.1/CP009501.1	-	1	2751	2597	4/7/15	4/10/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN03074597	GCA_000969885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/885/GCA_000969885.1_ASM96988v1	-	TM-1
Mannheimia haemolytica USDA-ARS-USMARC-184	1222034	PRJNA172854	172854	Proteobacteria	Gammaproteobacteria	2.5248	41.1	chromosome:CP006957.1	-	1	2579	2498	1/16/15	1/16/15	Complete Genome	USDA-ARS-USMARC	SAMN03275447	GCA_000819525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/525/GCA_000819525.1_ASM81952v1	-	USDA-ARS-USMARC-184
Aliivibrio fischeri	668	PRJNA311605	311605	Proteobacteria	Gammaproteobacteria	4.09236	38.3	-	LTZF01	37	3734	3642	5/9/16	4/5/17	Contig	MIT	SAMN04520028	GCA_001640545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/545/GCA_001640545.1_ASM164054v1	27128997	VLS2
Mycoplasma mycoides subsp. mycoides	2103	PRJNA272471	272471	Terrabacteria group	Tenericutes	1.2038	24	-	LAEW01	1	1147	1004	3/20/15	4/3/17	Contig	International Livestock Research Institute	SAMN03282439	GCA_000959055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/055/GCA_000959055.1_ASM95905v1	-	B237
Ureaplasma urealyticum 4318	1161917	PRJNA89461	89461	Terrabacteria group	Tenericutes	0.843929	25.7	-	AJGA01	15	679	599	3/20/12	3/30/17	Contig	The J. Craig Venter Institute	SAMN02436580	GCA_000255435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/435/GCA_000255435.2_Uurealyticum4318v1.0	-	4318
Porphyromonas gingivalis SJD2	1211023	PRJNA205615	205615	FCB group	Bacteroidetes/Chlorobi group	2.32955	48.4	-	ASYL01	117	2091	1885	12/4/13	4/2/17	Scaffold	Shanghai Jiao Tong University School of Medicine	SAMN02470968	GCA_000503975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/975/GCA_000503975.1_SJD2	24385574	SJD2
Streptococcus sp. VT 162	1419814	PRJNA227244	227244	Terrabacteria group	Firmicutes	2.04114	41.1	chromosome:CP007628.2	-	1	2019	1922	5/12/14	3/25/15	Complete Genome	Institute of Human Microbiology LLC	SAMN02401018	GCA_000688775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/775/GCA_000688775.2_ASM68877v2	-	VT 162
Lactobacillus fermentum FTDC8312	1339267	PRJNA205894	205894	Terrabacteria group	Firmicutes	1.96655	51.8	-	ASXU01	129	1934	1718	7/1/13	4/1/17	Scaffold	"Indian Institute of Technology, Mandi, HP, India"	SAMN02469912	GCA_000417005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/005/GCA_000417005.1_ASM41700v1	-	FTDC8312
Sulfolobus islandicus M.16.43	1132504	PRJNA80903	80903	TACK group	Crenarchaeota	2.58984	35	chromosome:NZ_AHJR01000001.1/AHJR01000001.1	AHJR01	1	2841	2572	1/25/12	3/30/17	Chromosome	University of Illinois	SAMN02471809	GCA_000245235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/235/GCA_000245235.2_ASM24523v2	22363207	M.16.43
Lactococcus garvieae ATCC 49156	420889	PRJNA191896	191896	Terrabacteria group	Firmicutes	1.93211	38.7	-	ASWT01	6	1979	1860	5/31/13	4/1/17	Contig	Broad Institute	SAMN02596969	GCA_000407645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/645/GCA_000407645.1_Lact_garv_ATCC49156_V2	-	ATCC 49156
Bifidobacterium adolescentis	1680	PRJNA300965	300965	Terrabacteria group	Actinobacteria	2.21274	59.2	-	LNKB01	15	1880	1752	4/24/17	4/27/17	Contig	University of Parma	SAMN04231308	GCA_002107925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/925/GCA_002107925.1_Bado42Bv1	27035119	42B
Vibrio harveyi VHJR4	1300144	PRJEB1546	215283	Proteobacteria	Gammaproteobacteria	5.76791	44.9	-	CAUN01	95	5408	5211	5/3/13	4/3/17	Contig	UMS	SAMEA3146286	GCA_001050875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/875/GCA_001050875.1_ASM105087v1	-	VHJR4
Lactobacillus helveticus CIRM-BIA 104	1226333	PRJEB1540	200910	Terrabacteria group	Firmicutes	2.06903	36.5	-	CBUL01	171	2213	1748	10/23/13	4/2/17	Scaffold	INRA STLO	SAMEA2272495	GCA_000493555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/555/GCA_000493555.1_LhCIRMBIA101V1	-	CIRM-BIA 104
Salinispora arenicola CNY280	1169173	PRJNA175181	175181	Terrabacteria group	Actinobacteria	6.06637	69.4	-	ARHH01	89	5571	5189	4/19/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02440451	GCA_000375205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/205/GCA_000375205.1_ASM37520v1	-	CNY280
Lactobacillus casei DSM 20011 = JCM 1134	1423732	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.82068	46.5	-	AZCO01	139	2938	2759	11/6/15	4/4/17	Scaffold	Shanghai Majorbio	SAMN02369372	GCA_001433735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/735/GCA_001433735.1_ASM143373v1	26415554	DSM 20011
Coxiella burnetii	777	PRJNA394747	394747	Proteobacteria	Gammaproteobacteria	2.19257	42.3	-	NOLM01	35	2338	2068	8/11/17	8/15/17	Scaffold	National Institutes of Health	SAMN07349496	GCA_002247155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/155/GCA_002247155.1_ASM224715v1	-	Dugway 7E65-68
Bibersteinia trehalosi USDA-ARS-USMARC-189	1263831	PRJNA182312	182312	Proteobacteria	Gammaproteobacteria	2.45413	41.1	chromosome:NZ_CP006955.1/CP006955.1	-	1	2317	2122	1/22/14	4/9/17	Complete Genome	USDA-ARS-USMARC	SAMN03081510	GCA_000521745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/745/GCA_000521745.1_ASM52174v1	-	USDA-ARS-USMARC-189
Bibersteinia trehalosi USDA-ARS-USMARC-190	1263832	PRJNA182313	182313	Proteobacteria	Gammaproteobacteria	2.44317	41.1	chromosome:NZ_CP006956.1/CP006956.1	-	1	2291	2159	1/22/14	4/9/17	Complete Genome	USDA-ARS-USMARC	SAMN03081511	GCA_000521765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/765/GCA_000521765.1_ASM52176v1	-	USDA-ARS-USMARC-190
Aeromonas salmonicida subsp. achromogenes AS03	1233098	PRJNA175472	175472	Proteobacteria	Gammaproteobacteria	4.95838	58.3	-	AMQG02	69	5063	3923	11/29/12	4/10/17	Contig	Seoul National University	SAMN02470909	GCA_000315855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/855/GCA_000315855.2_ASM31585v2	24092786	AS03
Streptococcus mitis bv. 2 str. SK95	1000588	PRJNA64679	64679	Terrabacteria group	Firmicutes	2.02073	40.8	-	AFUB01	66	2022	1899	8/4/11	3/30/17	Contig	J. Craig Venter Institute	SAMN00621712	GCA_000222705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/705/GCA_000222705.2_ASM22270v2	-	SK95
Oenococcus oeni DSM 20252 = AWRIB129	1122618	PRJNA133375	133375	Terrabacteria group	Firmicutes	1.72919	37.8	-	AJTP01	42	1761	1614	11/1/12	3/23/17	Contig	The Australian Wine Research Institute	SAMN02471116	GCA_000309445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/445/GCA_000309445.1_AWRIB129_v1	22863143	DSM 20252
Chlamydia pecorum PV3056/3	1234367	PRJNA175545	175545	PVC group	Chlamydiae	1.10455	41.1	chromosome:NC_022439.1/CP004033.1	-	1	984	933	9/24/13	4/2/17	Complete Genome	Moredun Research Institite	SAMN02603628	GCA_000470765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/765/GCA_000470765.1_ASM47076v1	24417976	PV3056/3
Campylobacter fetus subsp. venerealis bv. intermedius str. 99541	1333529	PRJNA202842	202842	Proteobacteria	delta/epsilon subdivisions	1.87172	33.1	-	ASTK01	218	1915	1803	6/24/13	4/1/17	Contig	"Facultad de Ciencias, UdelaR, Uruguay"	SAMN02469943	GCA_000414135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/135/GCA_000414135.1_Cfvi99541	23908278	99541
Chlamydia pecorum W73	1234368	PRJNA175546	175546	PVC group	Chlamydiae	1.10653	41.1	chromosome:NC_022440.1/CP004034.1	-	1	985	935	9/24/13	4/2/17	Complete Genome	Moredun Research Institute	SAMN02603629	GCA_000470805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/805/GCA_000470805.1_ASM47080v1	24417976	W73
Bartonella bacilliformis INS	1206782	PRJNA170060	170060	Proteobacteria	Alphaproteobacteria	1.44411	38.3	-	AMQK01	20	1289	1197	11/9/12	3/31/17	Contig	Instituto Nacional de Salud	SAMN02470056	GCA_000311905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/905/GCA_000311905.1_ASM31190v1	23409255	INS
Leptospira borgpetersenii serovar Javanica str. UI 09931	1049767	PRJNA74113	74113	Spirochaetes	Spirochaetia	3.89477	40.1	-	AHNP02	15	3726	3432	1/24/12	4/1/17	Contig	J. Craig Venter Institute	SAMN02436592	GCA_000244255.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/255/GCA_000244255.3_gls454103v02	-	UI 09931
Chlamydia pecorum P787	1234369	PRJNA175547	175547	PVC group	Chlamydiae	1.10641	41.1	chromosome:NC_022441.1/CP004035.1	-	1	983	931	9/24/13	4/2/17	Complete Genome	Moredun Research Institute	SAMN02603630	GCA_000470825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/825/GCA_000470825.1_ASM47082v1	24417976	P787
Yersinia pseudotuberculosis	633	PRJNA243530	243530	Proteobacteria	Gammaproteobacteria	4.77184	47.6	-	JPIY01	4	4414	4111	9/16/14	4/2/17	Scaffold	Los Alamos National Laboratory	SAMN02906914	GCA_000754965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/965/GCA_000754965.1_YAQ	25342679	ATCC 4284
Mannheimia haemolytica USMARC_2286	1366053	PRJNA212438	212438	Proteobacteria	Gammaproteobacteria	2.65851	41.1	chromosome:NC_021883.1/CP006619.1	-	1	2710	2559	7/24/13	4/1/17	Complete Genome	USDA-ARS U.S. Meat Animal Research Center	SAMN02262084	GCA_000439735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/735/GCA_000439735.1_ASM43973v1	-	USMARC_2286
Mannheimia haemolytica D174	1311760	PRJNA194567	194567	Proteobacteria	Gammaproteobacteria	2.7022	41.1	chromosome:NC_021739.1/CP006574.1	-	1	2791	2610	7/11/13	4/1/17	Complete Genome	National Animal Disease Center	SAMN02056364	GCA_000422095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/095/GCA_000422095.1_ASM42209v1	25745008	D174
Streptococcus salivarius K12	1200793	PRJNA168659	168659	Terrabacteria group	Firmicutes	2.42636	39.4805	plasmid pRSSL1:NZ_ALIF01000007.1/ALIF01000007.1	ALIF01	7	2293	2116	8/10/12	3/30/17	Contig	Nestle Research Center	SAMN02470675	GCA_000286295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/295/GCA_000286295.1_SsalK12v1	23045482	K12
Shigella boydii 248-1B	1212579	PRJNA171086	171086	Proteobacteria	Gammaproteobacteria	4.78801	50.9	-	AMKG01	166	5245	4352	1/6/15	8/8/17	Contig	Institute for Genome Sciences	SAMN03276485	GCA_000815835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/835/GCA_000815835.1_ASM81583v1	-	248-1B
Clostridioides difficile QCD-76w55	479832	PRJNA21105	21105	Terrabacteria group	Firmicutes	4.39689	28.1048	chromosome:NZ_CM000661.1/CM000661.1	ABHE02	24	4062	3941	11/5/07	5/18/17	Chromosome	McGill University	SAMN02470539	GCA_000154645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/645/GCA_000154645.1_ASM15464v1	-	-
Mannheimia haemolytica D171	1311759	PRJNA194566	194566	Proteobacteria	Gammaproteobacteria	2.50138	41.1	chromosome:NC_021738.1/CP006573.1	-	1	2489	2263	7/11/13	4/1/17	Complete Genome	National Animal Disease Center	SAMN02056363	GCA_000427275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/275/GCA_000427275.1_ASM42727v1	25767233	D171
Candidatus Pelagibacter ubique	198252	PRJEB9287	287342	Proteobacteria	Alphaproteobacteria	0.681366	29.7	-	CVSG01	101	776	702	6/17/15	4/10/17	Contig	UNIVERSITY OF CALIFORNIA - SAN DIEGO	SAMEA3368558	GCA_001179945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/945/GCA_001179945.1_CLC_assembled_contigs	-	SCGC AAA795-E07
Corynebacterium jeikeium	38289	PRJNA238244	238244	Terrabacteria group	Actinobacteria	2.2537	63	-	JFCR01	30	1988	1880	8/6/14	4/2/17	Contig	University of Washington	SAMN02641055	GCA_000738355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/355/GCA_000738355.1_Cj30952	25116839	Cj30952
Chlamydophila pecorum E58	331635	PRJNA62893	62893	PVC group	Chlamydiae	1.1062	41.1	chromosome:NC_015408.1/CP002608.1	-	1	985	934	4/13/11	3/30/17	Complete Genome	"Institute for Genome Sciences, University Of Maryland School of Medicine"	SAMN02603383	GCA_000204135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/135/GCA_000204135.1_ASM20413v1	21571992	E58
Streptococcus oralis Uo5	927666	PRJEA60241	60241	Terrabacteria group	Firmicutes	1.95869	41.1	chromosome:NC_015291.1/FR720602.1	-	1	1974	1835	3/23/11	3/30/17	Complete Genome	"Nano+Bio Center, University of Kaiserslautern"	SAMEA2272261	GCA_000253155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/155/GCA_000253155.1_ASM25315v1	21460080	Uo5
Sphingobacterium sp. 21	743722	PRJNA51631	51631	FCB group	Bacteroidetes/Chlorobi group	6.22641	41.1	chromosome:NC_015277.1/CP002584.1	-	1	5222	5114	3/22/11	5/19/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713594	GCA_000192845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/845/GCA_000192845.1_ASM19284v1	-	21
Streptococcus suis SC84	568813	PRJEA32239	32239	Terrabacteria group	Firmicutes	2.0959	41.1	chromosome:NC_012924.1/FM252031.1	-	1	2104	1983	7/7/09	3/15/17	Complete Genome	Sanger Institute	SAMEA2272312	GCA_000026725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/725/GCA_000026725.1_ASM2672v1	19603075	SC84
Bacillus pumilus	1408	PRJNA298672	298672	Terrabacteria group	Firmicutes	3.74512	42.2	chromosome:NZ_CP014165.1/CP014165.1	-	1	3652	3487	2/1/16	4/10/17	Chromosome	OSMANIA UNIVERSITY	SAMN04230746	GCA_001543165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/165/GCA_001543165.1_ASM154316v1	-	ku-bf1
Streptococcus suis 05ZYH33	391295	PRJNA17153	17153	Terrabacteria group	Firmicutes	2.09631	41.1	chromosome:CP000407.1	-	1	2254	2186	4/24/07	1/30/14	Complete Genome	"Beijing Institute of Genomics, Chinese Academy of Sciences,"	SAMN02603018	GCA_000014305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/305/GCA_000014305.1_ASM1430v1	-	05ZYH33
Streptococcus suis 98HAH33	391296	PRJNA17155	17155	Terrabacteria group	Firmicutes	2.0957	41.1	chromosome:CP000408.1	-	1	2257	2189	4/24/07	1/30/14	Complete Genome	"Beijing Institute of Genomics, Chinese Academy of Sciences,"	SAMN02603019	GCA_000014325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/325/GCA_000014325.1_ASM1432v1	-	98HAH33
Neorickettsia sennetsu str. Miyayama	222891	PRJNA357	357	Proteobacteria	Alphaproteobacteria	0.859006	41.1	chromosome:NC_007798.1/CP000237.1	-	1	800	759	2/21/06	4/6/17	Complete Genome	TIGR	SAMN02604016	GCA_000013165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/165/GCA_000013165.1_ASM1316v1	16482227	Miyayama
Lactobacillus reuteri MM4-1A	548485	PRJNA31511	31511	Terrabacteria group	Firmicutes	2.06791	38.9	-	ACGX02	7	2155	1993	2/19/09	3/30/17	Contig	Human Microbiome Project	SAMN00001504	GCA_000159475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/475/GCA_000159475.2_ASM15947v2	-	MM4-1A
Shigella dysenteriae	622	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	10.1177	54.1	-	1-Jun	1402	-	-	7/10/15	7/13/16	Scaffold	University of Washington	SAMN03198148	GCA_001067695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/695/GCA_001067695.1_ASM106769v1	26230489	93_SDYS
Anaplasma marginale str. Okeechobee	1000936	PRJNA64637	64637	Proteobacteria	Alphaproteobacteria	1.39099	47.5	-	AFMV01	403	1157	1042	5/31/11	3/30/17	Contig	University of Florida College of Veterinary Medicine	SAMN02469625	GCA_000215605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/605/GCA_000215605.2_ASM21560v2	21596083	Okeechobee
Brevibacillus laterosporus LMG 15441	1042163	PRJNA67803	67803	Terrabacteria group	Firmicutes	5.15386	41.0942	chromosome:NZ_CP007806.1/CP007806.1; plasmid pBRLA07:NZ_CP007808.1/CP007808.1; plasmid pBRLA33:NZ_CP007807.1/CP007807.1	-	3	4609	4333	7/22/14	4/9/17	Complete Genome	Georg-August-University Goettingen	SAMN02469848	GCA_000219535.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/535/GCA_000219535.3_ASM21953v3	21914864	LMG 15441
Bacteroides fragilis HMW 610	1073386	PRJNA71525	71525	FCB group	Bacteroidetes/Chlorobi group	5.58736	43.4	-	AGXQ01	9	4853	4559	9/17/12	5/18/17	Scaffold	Broad Institute	SAMN02463952	GCA_000297695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/695/GCA_000297695.1_Bact_frag_HMW_610_V1	-	HMW 610
Shigella sonnei S6513	1212564	PRJNA171071	171071	Proteobacteria	Gammaproteobacteria	4.84379	51.1	-	AMJR01	234	5331	4376	1/6/15	8/4/17	Contig	Institute for Genome Sciences	SAMN03276480	GCA_000815505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/505/GCA_000815505.1_ASM81550v1	-	S6513
Streptococcus suis	1307	PRJNA298205	298205	Terrabacteria group	Firmicutes	2.30221	41.0898	chromosome:NZ_CP012911.1/CP012911.1; plasmid pNSUI060a:NZ_CP012912.1/CP012912.1; plasmid pNSUI060b:NZ_CP012913.1/CP012913.1	-	3	2392	2185	2/25/16	3/19/17	Complete Genome	Public Health Ontario	SAMN04156190	GCA_001572685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/685/GCA_001572685.1_ASM157268v1	26954687	NSUI060
Bacillus licheniformis	1402	PRJNA338659	338659	Terrabacteria group	Firmicutes	4.27559	45.8703	chromosome:NZ_CM007615.1/CM007615.1	MIGE01	10	4424	4250	12/20/16	4/6/17	Chromosome	Tennessee State University	SAMN05559629	GCA_001914255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/255/GCA_001914255.1_ASM191425v1	-	YNP1-TSU
Histophilus somni	731	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.16998	37.2	-	LQGC01	29	1992	1874	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366576	GCA_001930975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/975/GCA_001930975.1_ASM193097v1	-	3556HS
Vibrio vulnificus JY1305	766729	PRJNA49015	49015	Proteobacteria	Gammaproteobacteria	4.95033	46.7	-	AFSW01	153	4665	4329	6/18/12	5/19/17	Contig	University of North Carolina at Charlotte	SAMN00216032	GCA_000269725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/725/GCA_000269725.1_ASM26972v1	22662170	JY1305
Pseudomonas syringae	317	PRJEB16445	349331	Proteobacteria	Gammaproteobacteria	5.87462	59.3	chromosome I:NZ_LT629769.1/LT629769.1	-	1	5296	5056	10/21/16	3/28/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05421724	GCA_900105295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/295/GCA_900105295.1_IMG-taxon_2687453698_annotated_assembly	-	31R1
Acinetobacter johnsonii XBB1	1242245	PRJNA177355	177355	Proteobacteria	Gammaproteobacteria	4.08133	41.0672	chromosome:NZ_CP010350.1/CP010350.1; plasmid pXBB1-1:NZ_CP010352.1/CP010352.1; plasmid pXBB1-2:NZ_CP010353.1/CP010353.1; plasmid pXBB1-3:NZ_CP010354.1/CP010354.1; plasmid pXBB1-4:NZ_CP010355.1/CP010355.1; plasmid pXBB1-5:NZ_CP010356.1/CP010356.1; plasmid pXBB1-6:NZ_CP010357.1/CP010357.1; plasmid pXBB1-8:NZ_CP010358.1/CP010358.1; plasmid pXBB1-9:NZ_CP010351.1/CP010351.1	-	9	4033	3672	1/5/16	4/5/17	Complete Genome	"West China Hospital, Sichuan University"	SAMN03268929	GCA_001484935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/935/GCA_001484935.1_ASM148493v1	-	XBB1
Calothrix sp. 336/3	1337936	PRJNA255071	255071	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.42013	41.056	chromosome:NZ_CP011382.1/CP011382.1; plasmid unnamed1:NZ_CP011383.1/CP011383.1; plasmid unnamed2:NZ_CP011384.1/CP011384.1; plasmid unnamed3:NZ_CP011385.1/CP011385.1	-	4	5433	5232	5/6/15	4/10/17	Complete Genome	"University of Turku, Department of Biochemistry"	SAMN02909965	GCA_000734895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/734/895/GCA_000734895.2_ASM73489v2	25614574	336/3
Streptococcus suis BM407	568814	PRJEA32237	32237	Terrabacteria group	Firmicutes	2.17081	41.0468	chromosome:NC_012926.1/FM252032.1; plasmid pBM407:NC_012923.1/FM252033.1	-	2	2136	1947	7/7/09	8/3/16	Complete Genome	The Wellcome Trust Sanger Institute	SAMEA2272697	GCA_000026745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/745/GCA_000026745.1_ASM2674v1	19603075	BM407
Lactobacillus sakei	1599	PRJNA377839	377839	Terrabacteria group	Firmicutes	2.05656	41.0089	chromosome:NZ_CP020459.1/CP020459.1; plasmid pFAM18311_1:NZ_CP020460.1/CP020460.1; plasmid pFAM18311_2:NZ_CP020461.1/CP020461.1	-	3	2109	1937	7/24/17	7/28/17	Complete Genome	ETH Zurich	SAMN06473274	GCA_002224565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/565/GCA_002224565.1_ASM222456v1	-	FAM18311
Photobacterium damselae subsp. piscicida	38294	PRJDB5709	383896	Proteobacteria	Gammaproteobacteria	4.29317	41.0082	chromosome 1:AP018045.1; chromosome 2:AP018046.1; plasmid p91-197-1:AP018047.1; plasmid p91-197-2:AP018048.1	-	4	4963	4783	5/16/17	5/16/17	Complete Genome	University of Miyazaki Faculty of Agriculture	SAMD00078763	GCA_002356235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/235/GCA_002356235.1_ASM235623v1	-	91-197
Fusobacterium nucleatum subsp. polymorphum ATCC 10953	393480	PRJNA17261	17261	Fusobacteria	Fusobacteriia	2.44163	26.7888	chromosome:NZ_CM000440.1/CM000440.1; plasmid pFN3:NC_009506.1/CP000710.1	AARG01	2	2418	2264	7/12/06	3/30/17	Chromosome	Baylor College of Medicine	SAMN02469324	GCA_000153625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/625/GCA_000153625.1_ASM15362v1	-	ATCC 10953
Agrobacterium tumefaciens 5A	1107544	PRJNA75079	75079	Proteobacteria	Alphaproteobacteria	5.74311	58.6	-	AGVZ01	50	5547	5349	11/23/11	5/18/17	Contig	University of Arizona	SAMN02472264	GCA_000236125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/125/GCA_000236125.2_ASM23612v2	22275101	5A
Pseudoalteromonas atlantica	288	PRJNA407396	407396	Proteobacteria	Gammaproteobacteria	3.6696	41	chromosome:CP023464.1	-	1	-	-	9/25/17	9/25/17	Complete Genome	Shanghai Ocean University	SAMN07652640	GCA_002374815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/374/815/GCA_002374815.1_ASM237481v1	-	ECSMB14104
Mannheimia haemolytica	75985	PRJNA172854	172854	Proteobacteria	Gammaproteobacteria	2.74647	41	chromosome:NZ_CP023046.1/CP023046.1	-	1	2822	2615	9/5/17	9/18/17	Complete Genome	USDA-ARS-USMARC	SAMN07537191	GCA_002285595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/595/GCA_002285595.1_ASM228559v1	-	187
Agarilytica rhodophyticola	1737490	PRJNA359155	359155	Proteobacteria	Gammaproteobacteria	6.87883	41	chromosome:NZ_CP020038.1/CP020038.1	-	1	5660	5534	5/24/17	6/9/17	Complete Genome	Shandong University at Weihai	SAMN06187574	GCA_002157225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/225/GCA_002157225.1_ASM215722v1	-	17
Streptococcus oralis	1303	PRJNA358614	358614	Terrabacteria group	Firmicutes	1.96691	41	chromosome:NZ_CP019562.1/CP019562.1	-	1	1963	1830	2/3/17	4/6/17	Complete Genome	University of California San Francisco	SAMN06179980	GCA_001983955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/955/GCA_001983955.1_ASM198395v1	-	S.MIT/ORALIS-351
Candidatus Nitrosotenuis cloacae	1603555	PRJNA272771	272771	TACK group	Thaumarchaeota	1.62016	41	chromosome:NZ_CP011097.1/CP011097.2	-	1	1860	1797	3/26/15	4/10/17	Complete Genome	Tsinghua University	SAMN03286947	GCA_000955905.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/955/905/GCA_000955905.3_ASM95590v3	27030530	SAT1
Actinobacillus pleuropneumoniae serovar 2 str. 4226	754254	PRJNA49597	49597	Proteobacteria	Gammaproteobacteria	2.31432	41.2	-	ADXN01	38	2241	2056	8/12/10	3/30/17	Contig	"Aarhus University, Denmark"	SAMN02469770	GCA_000179275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/275/GCA_000179275.1_ASM17927v1	20802047	4226
Leptospira interrogans serovar Pomona	44276	PRJNA309414	309414	Spirochaetes	Spirochaetia	4.62712	35	-	LUHH01	31	4257	3753	4/4/16	4/10/17	Scaffold	Instituto Nacional de Tecnologia Agropecuaria	SAMN04432834	GCA_001857845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/845/GCA_001857845.1_ASM185784v1	-	AKRFB
Mannheimia haemolytica	75985	PRJNA277374	277374	Proteobacteria	Gammaproteobacteria	2.70535	41	chromosome:NZ_CP011098.1/CP011098.1	-	1	2777	2625	3/26/15	4/3/17	Complete Genome	"USDA, ARS, USMARC"	SAMN03435925	GCA_000963635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/635/GCA_000963635.1_ASM96363v1	25953160	89010807N
Mannheimia haemolytica	75985	PRJNA277374	277374	Proteobacteria	Gammaproteobacteria	2.70422	41	chromosome:NZ_CP011099.1/CP011099.1	-	1	2778	2625	3/26/15	4/3/17	Complete Genome	"USDA, ARS, USMARC"	SAMN03435924	GCA_000963675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/675/GCA_000963675.1_ASM96367v1	25953160	89010807N lktA-
Streptococcus suis 6407	1214179	PRJNA254762	254762	Terrabacteria group	Firmicutes	2.29236	41	chromosome:NZ_CP008921.1/CP008921.1	-	1	2319	2132	7/22/14	3/16/17	Complete Genome	China Animal Health and Epidemiology Center	SAMN02905150	GCA_000732355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/355/GCA_000732355.1_ASM73235v1	25125641	6407
Bibersteinia trehalosi USDA-ARS-USMARC-188	1263829	PRJNA182311	182311	Proteobacteria	Gammaproteobacteria	2.34097	41	chromosome:NZ_CP006954.1/CP006954.1	-	1	2160	2054	1/22/14	4/9/17	Complete Genome	USDA-ARS-USMARC	SAMN03081509	GCA_000521725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/725/GCA_000521725.1_ASM52172v1	24526647	USDA-ARS-USMARC-188
Streptococcus suis T15	1340847	PRJNA206218	206218	Terrabacteria group	Firmicutes	2.24023	41	chromosome:NC_022665.1/CP006246.1	-	1	2286	2093	11/1/13	3/15/17	Complete Genome	Nanjing Agricultural University	SAMN02603633	GCA_000494895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/895/GCA_000494895.1_ASM49489v1	-	T15
Mannheimia haemolytica D153	1261126	PRJNA181152	181152	Proteobacteria	Gammaproteobacteria	2.68184	41	chromosome:NC_021743.1/CP005972.1	-	1	2751	2590	7/11/13	4/1/17	Complete Genome	National Animal Disease Center	SAMN02056285	GCA_000422145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/145/GCA_000422145.1_ASM42214v1	24136851	D153
Mannheimia haemolytica M42548	1316932	PRJNA196475	196475	Proteobacteria	Gammaproteobacteria	2.73187	41	chromosome:NC_021082.1/CP005383.1	-	1	2803	2651	4/22/13	4/1/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02603277	GCA_000376645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/645/GCA_000376645.1_ASM37664v1	"2,372,340,825,239,460"	M42548
Prochlorococcus marinus str. MIT 9116	167544	PRJNA246696	246696	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.6854	31	-	JNAJ01	22	1885	1787	9/29/14	4/2/17	Contig	MIT	SAMN02769553	GCA_000759865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/865/GCA_000759865.1_ASM75986v1	25977791	MIT 9116
Tropheryma whipplei str. DigADP25	1294035	PRJEB1452	189637	Terrabacteria group	Actinobacteria	0.883649	46.4	-	CAUW01	134	852	787	3/28/13	3/31/17	Contig	URMITE	SAMEA2272424	GCA_000359325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/325/GCA_000359325.1_ASM35932v1	-	DigADP25
Mannheimia haemolytica USDA-ARS-USMARC-183	1249531	PRJNA172854	172854	Proteobacteria	Gammaproteobacteria	2.65833	41	chromosome:CP004752.1	-	1	2815	2731	3/29/13	1/27/17	Complete Genome	USDA-ARS-USMARC	SAMN02048829	GCA_000349765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/765/GCA_000349765.1_ASM34976v1	-	USDA-ARS-USMARC-183
Mannheimia haemolytica USDA-ARS-USMARC-185	1249526	PRJNA172854	172854	Proteobacteria	Gammaproteobacteria	2.54467	41	chromosome:CP004753.1	-	1	2617	2537	3/29/13	1/27/17	Complete Genome	USDA-ARS-USMARC	SAMN02048830	GCA_000349785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/785/GCA_000349785.1_ASM34978v1	-	USDA-ARS-USMARC-185
Clostridium perfringens WAL-14572	742739	PRJNA46397	46397	Terrabacteria group	Firmicutes	3.46604	28.1	-	ADLP01	20	3188	2974	1/19/12	3/30/17	Scaffold	Broad Institute	SAMN02463856	GCA_000243175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/175/GCA_000243175.1_Clos_perf_WAL_14572_V2	-	WAL-14572
Xanthomonas campestris pv. incanae	92826	PRJNA185979	185979	Proteobacteria	Gammaproteobacteria	4.96729	65.2	chromosome:NZ_CM002635.1/CM002635.1	ATNN01	1	4423	4071	3/11/14	4/5/17	Chromosome	CNRS	SAMN02645670	GCA_000590315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/315/GCA_000590315.1_20120327	26581393	CFBP 1606R
Bibersteinia trehalosi USDA-ARS-USMARC-192	1171377	PRJNA157929	157929	Proteobacteria	Gammaproteobacteria	2.40785	41	chromosome:NC_020515.1/CP003745.1	-	1	2251	2137	3/20/13	4/8/17	Complete Genome	USDA-ARS-USMARC	SAMN02048828	GCA_000347595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/595/GCA_000347595.1_ASM34759v1	-	USDA-ARS-USMARC-192
Streptococcus suis D9	1005042	PRJNA65435	65435	Terrabacteria group	Firmicutes	2.17766	41	chromosome:NC_017620.1/CP002641.1	-	1	2189	1964	10/25/11	8/4/17	Complete Genome	Huazhong Agricultural University	SAMN02603321	GCA_000231885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/885/GCA_000231885.1_ASM23188v1	22026465	D9
Staphylococcus epidermidis Scl22	1344993	PRJNA207993	207993	Terrabacteria group	Firmicutes	2.37182	32.2	-	ATDB01	490	2385	2196	7/2/13	3/24/17	Scaffold	Max-Planck-Institute for Evolutionary Biology	SAMN02470518	GCA_000418045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/045/GCA_000418045.1_Scl22	-	Scl22
Fischerella sp. NIES-3754	1752063	PRJDB4348	305385	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.82686	40.9919	chromosome Unknown:NZ_AP017305.1/AP017305.1; plasmid pFIS3754-01:NZ_AP017306.1/AP017306.1; plasmid pFIS3754-02:NZ_AP017307.1/AP017307.1	-	3	4911	4584	12/5/15	4/11/17	Complete Genome	Toyohashi University of Technology	SAMD00042785	GCA_001548455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/455/GCA_001548455.1_ASM154845v1	26784989	NIES-3754
Prevotella melaninogenica	28132	PRJNA231221	231221	FCB group	Bacteroidetes/Chlorobi group	3.16811	40.9866	chromosome 1:NZ_CP022040.1/CP022040.1; chromosome 2:NZ_CP022041.1/CP022041.1	-	2	2494	2338	6/27/17	6/29/17	Complete Genome	US Food and Drug Administration 	SAMN06173319	GCA_002208725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/725/GCA_002208725.1_ASM220872v1	-	FDAARGOS_306
Prevotella melaninogenica ATCC 25845	553174	PRJNA31383	31383	FCB group	Bacteroidetes/Chlorobi group	3.16828	40.9866	chromosome I:NC_014370.1/CP002122.1; chromosome II:NC_014371.1/CP002123.1	-	2	2488	2360	8/4/10	4/7/17	Complete Genome	J. Craig Venter Institute	SAMN00001916	GCA_000144405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/405/GCA_000144405.1_ASM14440v1	-	ATCC 25845
Candidatus Paracaedibacter acanthamoebae	91604	PRJNA254818	254818	Proteobacteria	Alphaproteobacteria	2.48511	40.9697	chromosome:NZ_CP008941.1/CP008941.1; plasmid unnamed:NZ_CP008942.1/CP008942.1	-	2	2301	2172	8/21/14	4/17/17	Complete Genome	University of Virginia	SAMN02911856	GCA_000742835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/835/GCA_000742835.1_ASM74283v1	-	-
Streptococcus oralis	1303	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.05321	40.9	chromosome:CP023507.1	-	1	2045	1912	9/28/17	9/28/17	Complete Genome	US Food and Drug Administration 	SAMN07312411	GCA_002386345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/345/GCA_002386345.1_ASM238634v1	-	FDAARGOS_367
Planococcus faecalis	1598147	PRJNA361331	361331	Terrabacteria group	Firmicutes	3.49589	40.9	chromosome:NZ_CP019401.1/CP019401.1	-	1	3461	3312	3/2/17	3/9/17	Complete Genome	Ajou University	SAMN06231247	GCA_002009235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/235/GCA_002009235.1_ASM200923v1	-	AJ003
Sulfurospirillum multivorans DSM 12446	1150621	PRJNA84417	84417	Proteobacteria	delta/epsilon subdivisions	3.17573	40.9	chromosome:NZ_CP007201.1/CP007201.1	-	1	3288	3186	2/13/14	4/17/17	Complete Genome	Friedrich-Schiller-University of Jena	SAMN03081532	GCA_000568815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/815/GCA_000568815.1_ASM56881v1	25186071	DSM 12446
Planococcus kocurii	1374	PRJNA305663	305663	Terrabacteria group	Firmicutes	3.48558	40.8977	chromosome:NZ_CP013661.2/CP013661.2; plasmid unnamed:NZ_CP013660.2/CP013660.2	-	2	3415	3252	12/14/15	4/11/17	Complete Genome	University of Malaya	SAMN04331436	GCA_001465835.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/465/835/GCA_001465835.2_ASM146583v2	-	ATCC 43650
Photobacterium damselae subsp. damselae	85581	PRJNA385756	385756	Proteobacteria	Gammaproteobacteria	4.54459	40.8845	chromosome I:NZ_CP021151.1/CP021151.1; chromosome II:NZ_CP021152.1/CP021152.1; plasmid pPDD-Na-1-1:NZ_CP021153.1/CP021153.1; plasmid pPDD-Na-1-2:NZ_CP021154.1/CP021154.1; plasmid pPDD-Na-1-3:NZ_CP021155.1/CP021155.1; plasmid pPDD-Na-1-4:NZ_CP021156.1/CP021156.1	-	6	4280	3814	5/16/17	5/24/17	Complete Genome	Korea Research Institute of Bioscience & Biotechnology	SAMN06909323	GCA_002142615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/615/GCA_002142615.1_ASM214261v1	-	KC-Na-1
Legionella oakridgensis ATCC 33761 = DSM 21215	1268635	PRJNA183980	183980	Proteobacteria	Gammaproteobacteria	2.77321	40.8801	chromosome:NZ_CP004006.1/CP004006.1; plasmid unnamed:NZ_CP004007.1/CP004007.1	-	2	2732	2339	12/31/13	4/9/17	Complete Genome	"Georg-August-University of Goettingen, Genomics and Applied Microbiology, Göttinger Genomics Laboratory"	SAMN02641506	GCA_000512355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/355/GCA_000512355.1_ASM51235v1	23932911	ATCC 33761 = DSM 21215; OR-10
Pseudoalteromonas agarivorans DSM 14585	1312369	PRJNA195419	195419	Proteobacteria	Gammaproteobacteria	4.54496	40.8702	chromosome I:NZ_CP011011.1/CP011011.1; chromosome II:NZ_CP011012.1/CP011012.1	-	2	4119	3902	9/18/17	9/20/17	Complete Genome	Shandong University	SAMN03380222	GCA_002310855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/855/GCA_002310855.1_ASM231085v1	-	DSM 14585
Streptococcus marmotae	1825069	PRJNA316968	316968	Terrabacteria group	Firmicutes	2.32279	40.8461	chromosome:NZ_CP015196.1/CP015196.1; plasmid unnamed 1:NZ_CP015197.1/CP015197.1; plasmid unnamed 2:NZ_CP015198.1/CP015198.1	-	3	2274	2074	4/19/16	4/12/17	Complete Genome	"National Institute for Communicable Disease Control and Prevention, China CDC"	SAMN04592763	GCA_001623565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/565/GCA_001623565.1_ASM162356v1	-	HTS5
Staphylococcus epidermidis M0026	1388003	PRJNA216172	216172	Terrabacteria group	Firmicutes	2.5263	32	-	JBVX01	67	2499	2355	2/4/14	3/24/17	Scaffold	Broad Institute	SAMN02325127	GCA_000551165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/165/GCA_000551165.1_Stap_epid_M0026_V1	-	M0026
Bacillus oceanisediminis 2691	1196031	PRJNA167766	167766	Terrabacteria group	Firmicutes	5.84861	40.8428	chromosome:NZ_CP015506.1/CP015506.1; plasmid pBO1:NZ_CP015507.1/CP015507.1	-	2	5892	5630	5/9/16	4/12/17	Complete Genome	KRIBB	SAMN02470179	GCA_000294775.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/775/GCA_000294775.2_ASM29477v2	-	2691
Pseudoalteromonas spongiae UST010723-006	1117319	PRJNA77687	77687	Proteobacteria	Gammaproteobacteria	4.75241	40.8318	chromosome I:NZ_CP011039.1/CP011039.1; chromosome II:NZ_CP011040.1/CP011040.1	-	2	4306	4173	9/18/17	9/20/17	Complete Genome	Shandong University	SAMN02470926	GCA_000238255.4	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/255/GCA_000238255.4_ASM23825v4	22535931	UST010723-006
Xanthomonas campestris pv. incanae	92826	PRJNA185977	185977	Proteobacteria	Gammaproteobacteria	4.92577	65.1	chromosome:NZ_CM002636.1/CM002636.1	ATNO01	1	4380	4032	3/11/14	4/6/17	Chromosome	CNRS	SAMN02645671	GCA_000590335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/335/GCA_000590335.1_20120327	26581393	CFBP 2527R
Clostridium perfringens CP4	1074293	PRJNA294154	294154	Terrabacteria group	Firmicutes	3.64221	27.8	-	LIYI01	98	3391	3250	10/27/15	4/4/17	Scaffold	Agriculture and Agri-Food Canada	SAMN04017578	GCA_001414595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/595/GCA_001414595.1_CP4	20532244	CP4
Mycobacterium avium subsp. paratuberculosis	1770	PRJNA390765	390765	Terrabacteria group	Actinobacteria	4.82973	69.3	chromosome:NZ_CP022105.1/CP022105.1	-	1	4563	4325	6/30/17	7/3/17	Chromosome	"Friedrich-Loeffler-Institut, Institute of Molecular Pathogenesis"	SAMN07249768	GCA_002211525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/525/GCA_002211525.1_ASM221152v1	26384038	JII-1961
Mycobacterium bovis	1765	PRJNA284102	284102	Terrabacteria group	Actinobacteria	4.36395	65.6	chromosome:NZ_CP011455.1/CP011455.1	-	1	4256	3979	9/17/15	4/10/17	Chromosome	Central Research Institute for Epidemiology	SAMN03658568	GCA_001293105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/105/GCA_001293105.1_ASM129310v1	-	BCG-1
Tropheryma whipplei str. Neuro20	1294036	PRJEB1453	189633	Terrabacteria group	Actinobacteria	0.883582	46.4	-	CAUX01	125	857	788	3/28/13	3/31/17	Contig	URMITE	SAMEA2272650	GCA_000359345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/345/GCA_000359345.1_ASM35934v1	-	Neuro20
Prochlorococcus marinus str. EQPAC1	190047	PRJNA246696	246696	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.65474	30.8	-	JNAG01	8	1843	1779	9/29/14	4/2/17	Contig	MIT	SAMN02769549	GCA_000759875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/875/GCA_000759875.1_ASM75987v1	25977791	EQPAC1
Lactobacillus backii	375175	PRJNA290141	290141	Terrabacteria group	Firmicutes	2.82438	40.8178	chromosome:NZ_CP014623.1/CP014623.1; plasmid L11988-1:NZ_CP014624.1/CP014624.1; plasmid L11988-10:NZ_CP014625.1/CP014625.1; plasmid L11988-2:NZ_CP014626.1/CP014626.1; plasmid L11988-3:NZ_CP014627.1/CP014627.1; plasmid L11988-4:NZ_CP014628.1/CP014628.1; plasmid L11988-5:NZ_CP014629.1/CP014629.1; plasmid L11988-6:NZ_CP014630.1/CP014630.1; plasmid L11988-7:NZ_CP014631.1/CP014631.1; plasmid L11988-8:NZ_CP014632.1/CP014632.1; plasmid L11988-9:NZ_CP014633.1/CP014633.1	-	11	2696	2522	6/16/16	4/12/17	Complete Genome	Technische Universitaet Muenchen	SAMN04505726	GCA_001663655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/655/GCA_001663655.1_ASM166365v1	-	TMW 1.1988
Lactobacillus backii	375175	PRJNA290141	290141	Terrabacteria group	Firmicutes	2.78291	40.8153	chromosome:NZ_CP014890.1/CP014890.1; plasmid pL11992-1:NZ_CP014891.1/CP014891.1; plasmid pL11992-2:NZ_CP014892.1/CP014892.1; plasmid pL11992-3:NZ_CP014893.1/CP014893.1; plasmid pL11992-4:NZ_CP014894.1/CP014894.1; plasmid pL11992-5:NZ_CP014895.1/CP014895.1; plasmid pL11992-6:NZ_CP014896.1/CP014896.1; plasmid pL11992-7:NZ_CP014897.1/CP014897.1; plasmid pL11992-8:NZ_CP014898.1/CP014898.1	-	9	2641	2474	6/16/16	4/12/17	Complete Genome	Technische Universitaet Muenchen	SAMN04505729	GCA_001663735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/735/GCA_001663735.1_ASM166373v1	-	TMW 1.1992
Shewanella japonica	93973	PRJNA380174	380174	Proteobacteria	Gammaproteobacteria	4.97568	40.8	chromosome:NZ_CP020472.1/CP020472.1	-	1	4274	4036	3/31/17	4/6/17	Complete Genome	Korea Polar Research Institute	SAMN06628905	GCA_002075795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/795/GCA_002075795.1_ASM207579v1	-	KCTC 22435
Helicobacter sp. MIT 01-6242	222136	PRJNA328770	328770	Proteobacteria	delta/epsilon subdivisions	1.59479	40.8	chromosome:NZ_CP016503.1/CP016503.1	-	1	1553	1492	7/25/16	4/17/17	Complete Genome	MIT	SAMN05379701	GCA_001693335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/335/GCA_001693335.1_ASM169333v1	-	MIT 01-6242
Weissella ceti	759620	PRJNA243375	243375	Terrabacteria group	Firmicutes	1.35585	40.8	chromosome:NZ_CP007588.1/CP007588.1	-	1	1348	1245	7/24/14	4/9/17	Complete Genome	"Aquacen - National Reference Laboratory for Aquatic Animal Diseases, Brazilian Ministry of Fisheries and Aquaculture and Laboratory of Cellular and Molecular Genetics, Federal University of Minas Gerais"	SAMN02716090	GCA_000732905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/905/GCA_000732905.1_ASM73290v1	25146147	WS08
Pyrococcus furiosus COM1	1185654	PRJNA163827	163827	Euryarchaeota	Thermococci	1.90983	40.8	chromosome:NC_018092.1/CP003685.1	-	1	2133	2001	6/29/12	4/7/17	Complete Genome	ENIGMA- Ecosystems and Networks Integrated with Genes and Molecular Assemblies	SAMN02603219	GCA_000275605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/605/GCA_000275605.1_ASM27560v1	22636780	COM1
Methanococcoides burtonii DSM 6242	259564	PRJNA9634	9634	Euryarchaeota	Methanomicrobia	2.57503	40.8	chromosome:NC_007955.1/CP000300.1	-	1	2571	2406	4/10/06	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02598545	GCA_000013725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/725/GCA_000013725.1_ASM1372v1	-	DSM 6242
Leptospira interrogans serovar Djasiman str. LT1649	1001596	PRJNA65061	65061	Spirochaetes	Spirochaetia	4.67966	34.9	-	AFMB02	229	4211	3812	6/7/11	5/19/17	Contig	J. Craig Venter Institute	SAMN02436336	GCA_000216195.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/195/GCA_000216195.3_LintLT1649v0.2	-	LT1649
Actinobacillus pleuropneumoniae serovar 6 str. Femo	754256	PRJNA49599	49599	Proteobacteria	Gammaproteobacteria	2.3755	40.9	-	ADXO01	36	2316	2168	8/12/10	3/30/17	Contig	"Aarhus University, Denmark"	SAMN02469771	GCA_000179295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/295/GCA_000179295.1_ASM17929v1	20802047	Femo
Pyrococcus furiosus DSM 3638	186497	PRJNA287	287	Euryarchaeota	Thermococci	1.90826	40.8	chromosome:NC_003413.1/AE009950.1	-	1	2121	1979	2/12/02	4/6/17	Complete Genome	Utah Genome Center	SAMN02604284	GCA_000007305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/305/GCA_000007305.1_ASM730v1	"104,305,601,111,510,000,000,000"	DSM 3638
Xylella fastidiosa subsp. multiplex ATCC 35871	1267006	PRJNA183054	183054	Proteobacteria	Gammaproteobacteria	2.41626	51.7	-	AUAJ01	58	2283	2039	7/15/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441559	GCA_000428665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/665/GCA_000428665.1_ASM42866v1	-	ATCC 35871
Bacillus smithii	1479	PRJNA258357	258357	Terrabacteria group	Firmicutes	3.38129	40.7819	chromosome 1:NZ_CP012024.1/CP012024.1; plasmid pDSM4216:NZ_CP012025.1/CP012025.1	-	2	3284	3072	7/8/15	4/10/17	Complete Genome	Corbion	SAMN03246763	GCA_001050115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/115/GCA_001050115.1_ASM105011v1	-	DSM 4216
Lactobacillus backii	375175	PRJNA290141	290141	Terrabacteria group	Firmicutes	2.85194	40.7464	chromosome:NZ_CP014873.1/CP014873.1; plasmid pL11989-1:NZ_CP014874.1/CP014874.1; plasmid pL11989-2:NZ_CP014875.1/CP014875.1; plasmid pL11989-3:NZ_CP014876.1/CP014876.1; plasmid pL11989-4:NZ_CP014877.1/CP014877.1; plasmid pL11989-5:NZ_CP014878.1/CP014878.1; plasmid pL11989-6:NZ_CP014879.1/CP014879.1; plasmid pL11989-7:NZ_CP014880.1/CP014880.1	-	8	2670	2528	6/16/16	4/12/17	Complete Genome	Technische Universitaet Muenchen	SAMN04505727	GCA_001663675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/675/GCA_001663675.1_ASM166367v1	-	TMW 1.1989
Shigella flexneri 5a str. M90T	1086030	PRJNA73131	73131	Proteobacteria	Gammaproteobacteria	4.58087	50.9	chromosome:NZ_CM001474.1/CM001474.1	AGNM01	1	4982	4149	3/15/12	8/4/17	Chromosome	Dalhousie University	SAMN02469698	GCA_000252895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/895/GCA_000252895.1_ASM25289v1	22582379	M90T
Agrobacterium tumefaciens str. Cherry 2E-2-2	1281779	PRJNA186406	186406	Proteobacteria	Alphaproteobacteria	5.42529	59.9	-	APCC01	112	5193	4976	3/29/13	5/18/17	Contig	University of Delhi	SAMN02471712	GCA_000349865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/865/GCA_000349865.1_Cherry1.0	23723402	Cherry 2E-2-2
Fusobacterium nucleatum subsp. animalis 21_1A	469601	PRJNA32475	32475	Fusobacteria	Fusobacteriia	2.15401	27	chromosome:NZ_CM002368.1/CM002368.1	ADEE02	1	4195	3979	6/15/11	4/2/17	Chromosome	Broad Institute	SAMN02463708	GCA_000218645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/645/GCA_000218645.2_Fusobacterium_sp_21_1A_V3	-	21_1A
Lactobacillus backii	375175	PRJNA290141	290141	Terrabacteria group	Firmicutes	2.8456	40.7359	chromosome:NZ_CP014899.1/CP014899.1; plasmid pL12002-1:NZ_CP014900.1/CP014900.1; plasmid pL12002-2:NZ_CP014901.1/CP014901.1; plasmid pL12002-3:NZ_CP014902.1/CP014902.1; plasmid pL12002-4:NZ_CP014903.1/CP014903.1; plasmid pL12002-5:NZ_CP014904.1/CP014904.1; plasmid pL12002-6:NZ_CP014905.1/CP014905.1; plasmid pL12002-7:NZ_CP014906.1/CP014906.1	-	8	2662	2507	6/16/16	4/12/17	Complete Genome	Technische Universitaet Muenchen	SAMN04505730	GCA_001663755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/755/GCA_001663755.1_ASM166375v1	-	TMW 1.2002
Streptococcus gordonii	1302	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.12131	40.7	chromosome:CP023511.1	-	1	2099	1970	9/28/17	9/28/17	Complete Genome	US Food and Drug Administration 	SAMN07312415	GCA_002386285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/285/GCA_002386285.1_ASM238628v1	-	FDAARGOS_371
Legionella lansingensis	45067	PRJEB6403	251923	Proteobacteria	Gammaproteobacteria	2.98926	40.7	chromosome 1:NZ_LT906451.1/LT906451.1	-	1	2737	2635	8/15/17	8/28/17	Complete Genome	SC	SAMEA44548918	GCA_900187355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/355/GCA_900187355.1_51342_E02	-	NCTC12830
Fervidobacterium islandicum	2423	PRJNA263006	263006	Thermotogae	Thermotogae	2.23738	40.7	chromosome:NZ_CP014334.1/CP014334.1	-	1	2065	1897	4/6/16	4/17/17	Complete Genome	KRIBB	SAMN03097205	GCA_000767275.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/275/GCA_000767275.3_ASM76727v3	26421103	AW-1
Weissella ceti	759620	PRJNA257149	257149	Terrabacteria group	Firmicutes	1.3904	40.7	chromosome:NZ_CP009224.1/CP009224.1	-	1	1399	1246	9/9/14	4/9/17	Complete Genome	Universidade Federal de Minas Gerais	SAMN02947896	GCA_000750535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/535/GCA_000750535.1_ASM75053v1	25323710	WS105
Pseudomonas syringae pv. syringae B64	1260626	PRJNA180994	180994	Proteobacteria	Gammaproteobacteria	5.93004	59.0498	chromosome:NZ_CM001763.1/CM001763.1	ANZF01	1	5247	4965	1/4/13	5/19/17	Chromosome	"Institute of Plant Biology, University of Zurich"	SAMN02472031	GCA_000331385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/385/GCA_000331385.1_PSSB64v1.0	24501627	B64
Vibrio vulnificus E64MW	1035116	PRJNA67135	67135	Proteobacteria	Gammaproteobacteria	4.96268	46.7	-	AFSX01	269	4897	4256	6/18/12	5/19/17	Contig	"Bioinformatics and Genomics Department, University of North Carolina at Charlotte"	SAMN01893923	GCA_000269745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/745/GCA_000269745.1_ASM26974v1	22662170	E64MW
Histophilus somni	731	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.26135	37.2	-	LQGD01	78	2133	1977	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366577	GCA_001931005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/005/GCA_001931005.1_ASM193100v1	-	3570HS
Bacillus licheniformis	1402	PRJNA308440	308440	Terrabacteria group	Firmicutes	4.15496	46.3	-	LQRR01	24	4302	4130	5/12/16	4/5/17	Scaffold	Institute of Biotechnology CAS	SAMN04395482	GCA_001642595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/595/GCA_001642595.1_ASM164259v1	-	V30
Weissella ceti	759620	PRJNA257148	257148	Terrabacteria group	Firmicutes	1.38951	40.7	chromosome:NZ_CP009223.1/CP009223.1	-	1	1408	1279	9/9/14	4/9/17	Complete Genome	Universidade Federal de Minas Gerais	SAMN02947894	GCA_000750515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/515/GCA_000750515.1_ASM75051v1	25323710	WS74
Shigella sonnei 08-7761	1212580	PRJNA171087	171087	Proteobacteria	Gammaproteobacteria	4.89316	51	-	AMKH01	95	5387	4430	1/6/15	8/8/17	Contig	Institute for Genome Sciences	SAMN03276481	GCA_000815815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/815/GCA_000815815.1_ASM81581v1	-	Aug-61
Bacteroides fragilis HMW 615	1073387	PRJNA71527	71527	FCB group	Bacteroidetes/Chlorobi group	5.41968	43.5	-	AGXR01	14	4772	4471	9/17/12	5/18/17	Scaffold	Broad Institute	SAMN02463953	GCA_000297735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/735/GCA_000297735.1_Bact_frag_HMW_615_V1	-	HMW 615
Lactobacillus backii	375175	PRJNA290141	290141	Terrabacteria group	Firmicutes	2.81843	40.6876	chromosome:NZ_CP014881.1/CP014881.1; plasmid pL11991-1:NZ_CP014882.1/CP014882.1; plasmid pL11991-2:NZ_CP014883.1/CP014883.1; plasmid pL11991-3:NZ_CP014884.1/CP014884.1; plasmid pL11991-4:NZ_CP014885.1/CP014885.1; plasmid pL11991-5:NZ_CP014886.1/CP014886.1; plasmid pL11991-6:NZ_CP014887.1/CP014887.1; plasmid pL11991-7:NZ_CP014888.1/CP014888.1; plasmid pL11991-8:NZ_CP014889.1/CP014889.1	-	9	2626	2464	6/16/16	4/12/17	Complete Genome	Technische Universitaet Muenchen	SAMN04505728	GCA_001663715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/715/GCA_001663715.1_ASM166371v1	-	TMW 1.1991
Shigella dysenteriae 1617	754093	PRJNA48263	48263	Proteobacteria	Gammaproteobacteria	4.61356	51.2	-	ADUT01	67	5958	5840	10/18/10	2/28/12	Contig	Institute for Genome Sciences	SAMN00792434	GCA_000164925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/925/GCA_000164925.2_ASM16492v1	-	1617
Lactobacillus reuteri 100-23	349123	PRJNA13431	13431	Terrabacteria group	Firmicutes	2.30556	38.7	-	AAPZ02	2	2234	2065	4/11/06	3/30/17	Contig	DOE Joint Genome Institute	SAMN00623049	GCA_000168255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/255/GCA_000168255.1_ASM16825v1	-	100-23
Synechococcus sp. PCC 7502	1173263	PRJNA159509	159509	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.58373	40.6019	chromosome:NC_019702.1/CP003594.1; plasmid pSYN7502.01:NC_019691.1/CP003595.1; plasmid pSYN7502.02:NC_019692.1/CP003596.1	-	3	3648	3442	12/5/12	4/8/17	Complete Genome	JGI	SAMN02261356	GCA_000317085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/085/GCA_000317085.1_ASM31708v1	-	PCC 7502
Streptococcus gordonii	1302	PRJNA270133	270133	Terrabacteria group	Firmicutes	2.28331	40.6	chromosome:NZ_CP012648.1/CP012648.1	-	1	2270	2129	9/11/15	4/4/17	Complete Genome	Chosun University	SAMN03263085	GCA_001281105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/105/GCA_001281105.1_ASM128110v1	-	KCOM 1506 (= ChDC B679)
Chlamydia pneumoniae	83558	PRJEB8246	278828	PVC group	Chlamydiae	1.22812	40.6	chromosome 1:NZ_LN846980.1/LN846980.1	-	1	1121	1064	5/9/15	4/3/17	Complete Genome	University of Vienna	SAMEA3212833	GCA_001007025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/025/GCA_001007025.1_Wien1	-	-
Bacillus pumilus	1408	PRJNA278012	278012	Terrabacteria group	Firmicutes	3.65936	41.4	chromosome:NZ_CP011109.1/CP011109.1	-	1	3768	3644	7/18/16	4/5/17	Chromosome	University of Boras	SAMN03401316	GCA_001687085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/085/GCA_001687085.1_ASM168708v1	-	C4
Chlamydia pneumoniae	83558	PRJEB8246	278828	PVC group	Chlamydiae	1.22852	40.6	chromosome 1:NZ_LN847221.1/LN847221.1	-	1	1122	1064	5/9/15	4/3/17	Complete Genome	University of Vienna	SAMEA3212826	GCA_001007045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/045/GCA_001007045.1_K7	-	-
Chlamydia pneumoniae	83558	PRJEB8246	278828	PVC group	Chlamydiae	1.22858	40.6	chromosome 1:NZ_LN847000.1/LN847000.1	-	1	1121	1065	5/9/15	4/3/17	Complete Genome	University of Vienna	SAMEA3212821	GCA_001007065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/065/GCA_001007065.1_CWL011	-	-
Chlamydia pneumoniae	83558	PRJEB8246	278828	PVC group	Chlamydiae	1.22858	40.6	chromosome 1:NZ_LN847257.1/LN847257.1	-	1	1122	1067	5/9/15	4/3/17	Complete Genome	University of Vienna	SAMEA3212835	GCA_001007085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/085/GCA_001007085.1_Wien3	-	-
Chlamydia pneumoniae	83558	PRJEB8246	278828	PVC group	Chlamydiae	1.22812	40.6	chromosome 1:NZ_LN846996.1/LN846996.1	-	1	1121	1064	5/9/15	4/3/17	Complete Genome	University of Vienna	SAMEA3212819	GCA_001007105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/105/GCA_001007105.1_CV14	-	-
Corynebacterium jeikeium	38289	PRJNA238244	238244	Terrabacteria group	Actinobacteria	2.50307	61.4	-	JFCO01	75	2227	2094	8/6/14	4/2/17	Contig	University of Washington	SAMN02641059	GCA_000738385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/385/GCA_000738385.1_Cj47445	25116839	Cj47445
Candidatus Pelagibacter ubique	198252	PRJEB9287	287342	Proteobacteria	Alphaproteobacteria	0.801227	29	-	CVSH01	63	860	780	6/17/15	4/10/17	Contig	UNIVERSITY OF CALIFORNIA - SAN DIEGO	SAMEA3368559	GCA_001179965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/965/GCA_001179965.1_CLC_assembled_contigs	-	SCGC AAA795-E22
Chlamydia pneumoniae	83558	PRJEB8246	278828	PVC group	Chlamydiae	1.22989	40.6	chromosome 1:NZ_LN846995.1/LN846995.1	-	1	1125	1067	5/9/15	4/3/17	Complete Genome	University of Vienna	SAMEA3212818	GCA_001007125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/125/GCA_001007125.1_CM1	-	-
Clostridioides difficile QCD-97b34	479833	PRJNA21107	21107	Terrabacteria group	Firmicutes	4.06361	28.3273	chromosome:NZ_CM000657.1/CM000657.1	ABHF02	15	3745	3627	11/5/07	3/15/17	Chromosome	McGill University	SAMN02470532	GCA_000154665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/665/GCA_000154665.1_ASM15466v1	-	-
Shigella boydii	621	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.84505	50.7	-	JVYE01	398	5125	4745	7/10/15	2/24/17	Contig	University of Washington	SAMN03197186	GCA_001061295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/295/GCA_001061295.1_ASM106129v1	26230489	1221_SBOY
Streptococcus salivarius	1304	PRJNA243890	243890	Terrabacteria group	Firmicutes	2.34449	39.4	-	JJMT01	51	2209	2090	6/27/14	4/2/17	Contig	University of Malaya	SAMN02720830	GCA_000714445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/445/GCA_000714445.1_De_Novo_Assembly	-	NU10
Chlamydia pneumoniae	83558	PRJEB8246	278828	PVC group	Chlamydiae	1.22813	40.6	chromosome 1:NZ_LN847241.1/LN847241.1	-	1	1122	1063	5/9/15	4/3/17	Complete Genome	University of Vienna	SAMEA3212830	GCA_001007145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/145/GCA_001007145.1_PB2	-	-
Chlamydophila pneumoniae TW-183	182082	PRJNA420	420	PVC group	Chlamydiae	1.22593	40.6	chromosome:NC_005043.1/AE009440.1	-	1	1120	1065	7/25/03	3/29/17	Complete Genome	ALTANA Pharma	SAMN02602979	GCA_000007205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/205/GCA_000007205.1_ASM720v1	-	TW-183
Yersinia pseudotuberculosis B-6796	1286084	PRJEB1337	187434	Proteobacteria	Gammaproteobacteria	4.26307	47.6	-	CAQT01	262	3896	3610	2/20/13	5/19/17	Contig	UPSUD	SAMEA2272324	GCA_000343955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/955/GCA_000343955.1_ASM34395v1	-	B-6796
Chlamydophila pneumoniae J138	138677	PRJNA257	257	PVC group	Chlamydiae	1.22656	40.6	chromosome:NC_002491.1/BA000008.3	-	1	1123	1064	12/8/00	3/29/17	Complete Genome	Yamaguchi/Kyushu U.	SAMD00061097	GCA_000011165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/165/GCA_000011165.1_ASM1116v1	"1,083,975,310,871,360"	J138
Leptospira borgpetersenii serovar Castellonis str. 200801910	1049762	PRJNA74139	74139	Spirochaetes	Spirochaetia	3.97048	40	-	AHOB02	22	3839	3456	1/24/12	3/31/17	Contig	J. Craig Venter Institute	SAMN02436417	GCA_000244495.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/495/GCA_000244495.3_Lborg200801910v2.0	-	200801910
Bartonella bacilliformis	774	PRJNA308542	308542	Proteobacteria	Alphaproteobacteria	1.40561	38.2	-	LQXX01	11	1243	1143	4/20/16	4/5/17	Contig	IrsiCaixa Foundation	SAMN04404356	GCA_001624625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/624/625/GCA_001624625.1_ASM162462v1	-	USM-LMMB 07
Chlamydophila pneumoniae AR39	115711	PRJNA247	247	PVC group	Chlamydiae	1.23439	40.6	chromosome:AE002161.1; chromosome:NC_002180.1/AE002163.1	-	2	1171	1116	2/29/00	2/14/14	Complete Genome	TIGR	SAMN02641564	GCA_000091085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/091/085/GCA_000091085.2_ASM9108v2	10684935	AR39
Campylobacter fetus subsp. fetus	32019	PRJNA274865	274865	Proteobacteria	delta/epsilon subdivisions	1.74488	33.2	-	JYCP01	34	1764	1690	10/20/15	4/4/17	Contig	Institut Pasteur Montevideo	SAMN03333108	GCA_001399955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/955/GCA_001399955.1_ASM139995v1	25920493	H1-UY
Chlamydophila pneumoniae CWL029	115713	PRJNA248	248	PVC group	Chlamydiae	1.23023	40.6	chromosome:NC_000922.1/AE001363.1	-	1	1091	1029	12/22/99	8/3/16	Complete Genome	ChGP	SAMN02603115	GCA_000008745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/745/GCA_000008745.1_ASM874v1	10192388	CWL029
Oenococcus oeni DSM 20252 = AWRIB129	1122618	PRJNA165413	165413	Terrabacteria group	Firmicutes	1.73758	37.8	-	AQVA01	28	1790	1620	4/19/13	3/23/17	Contig	DOE Joint Genome Institute	SAMN02256505	GCA_000372485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/485/GCA_000372485.1_ASM37248v1	-	DSM 20252
Streptococcus mitis SK569	1035187	PRJNA67187	67187	Terrabacteria group	Firmicutes	1.97527	40.2	-	AFUF01	54	1984	1788	8/4/11	3/30/17	Contig	J. Craig Venter Institute	SAMN00621701	GCA_000222785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/785/GCA_000222785.2_ASM22278v2	-	SK569
Aeromonas salmonicida subsp. pectinolytica 34mel	1324960	PRJNA198485	198485	Proteobacteria	Gammaproteobacteria	4.76735	58.5	-	ARYZ02	253	4369	4075	8/15/13	4/3/17	Contig	"Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires"	SAMN03322533	GCA_000447435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/435/GCA_000447435.2_ASM44743v2	"2,402,975,426,025,890"	34mel
Pseudoalteromonas phenolica	161398	PRJNA301786	301786	Proteobacteria	Gammaproteobacteria	4.86899	40.5898	chromosome I:NZ_CP013187.1/CP013187.1; chromosome II:NZ_CP013188.1/CP013188.1	-	2	4355	4176	11/17/15	4/16/17	Complete Genome	Korea Research Institute of Bioscience and Biotechnology	SAMN04259808	GCA_001444405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/405/GCA_001444405.1_ASM144440v1	-	KCTC 12086
Bacillus horikoshii	79883	PRJNA377620	377620	Terrabacteria group	Firmicutes	4.29588	40.5638	chromosome:NZ_CP020880.1/CP020880.1; plasmid unnamed1:NZ_CP020881.1/CP020881.1	-	2	4343	4176	5/25/17	6/15/17	Complete Genome	Centro de Investigacion y de Estudios Avanzados del IPN - Irapuato	SAMN06463911	GCA_002157855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/855/GCA_002157855.1_ASM215785v1	-	20a
Coxiella burnetii	777	PRJNA394747	394747	Proteobacteria	Gammaproteobacteria	2.00572	42.5	-	NOLR01	39	2208	1947	8/11/17	8/15/17	Scaffold	National Institutes of Health	SAMN07349491	GCA_002247185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/185/GCA_002247185.1_ASM224718v1	-	Idaho Goat Q195
Lactobacillus casei 21/1	1051651	PRJNA68459	68459	Terrabacteria group	Firmicutes	3.21588	46.2	-	AFYK01	75	3441	2921	11/2/12	4/10/17	Contig	"University of Wisconsin-Madison, Utah State University"	SAMN02472009	GCA_000309585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/585/GCA_000309585.1_ASM30958v1	23035691	21/1
Salinispora arenicola CNY237	1169185	PRJNA175187	175187	Terrabacteria group	Actinobacteria	5.71364	69.6	-	ARHM01	67	5213	4915	4/19/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441692	GCA_000375305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/305/GCA_000375305.1_ASM37530v1	-	CNY237
Lactobacillus helveticus DSM 20075 = CGMCC 1.1877	585520	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.82872	36.8	-	AZEK01	257	1878	1589	11/6/15	4/4/17	Scaffold	Shanghai Majorbio	SAMN02369370	GCA_001434945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/945/GCA_001434945.1_ASM143494v1	26415554	CGMCC 1.1877
Vibrio harveyi	669	PRJNA257174	257174	Proteobacteria	Gammaproteobacteria	5.98763	44.8	-	JPTP01	341	5679	5408	7/22/15	4/3/17	Contig	Naval Research Laboratory	SAMN02948026	GCA_001185405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/405/GCA_001185405.1_ASM118540v1	-	CAIM463
Bifidobacterium adolescentis	1680	PRJNA300965	300965	Terrabacteria group	Actinobacteria	2.21213	58.8	-	LNKC01	14	1850	1712	4/24/17	4/26/17	Contig	University of Parma	SAMN04231309	GCA_002107955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/955/GCA_002107955.1_Bado70Bv1	27035119	70B
Lactococcus garvieae NBRC 100934	1223498	PRJDB424	173143	Terrabacteria group	Firmicutes	2.02835	38.5	-	BBJW01	56	2044	1912	8/2/14	4/2/17	Contig	National Institute of Technology and Evaluation	SAMD00000361	GCA_000739975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/975/GCA_000739975.1_ASM73997v1	-	NBRC 100934
Sulfolobus islandicus M.16.47	1132506	PRJNA80907	80907	TACK group	Crenarchaeota	2.63756	35.1	chromosome:NZ_AHJT01000001.1/AHJT01000001.1	AHJT01	1	2887	2520	1/25/12	3/30/17	Chromosome	University of Illinois	SAMN02471811	GCA_000245275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/275/GCA_000245275.2_ASM24527v2	22363207	M.16.47
Lactobacillus fermentum NB-22	1408443	PRJNA223167	223167	Terrabacteria group	Firmicutes	2.01131	51.8	-	AYHA01	137	1993	1837	11/8/13	4/2/17	Scaffold	Pharmbacter JSC	SAMN02470787	GCA_000496435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/435/GCA_000496435.1_LfermNB22_1.0	26272572	NB-22
Nostoc sp. NIES-3756	1751286	PRJDB4341	302744	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.98757	40.5485	chromosome Unknown:NZ_AP017295.1/AP017295.1; plasmid pNOS3756_1:NZ_AP017296.1/AP017296.1; plasmid pNOS3756_2:NZ_AP017297.1/AP017297.1	-	3	5969	5710	11/18/15	4/11/17	Complete Genome	Toyohashi University of Technology	SAMD00042755	GCA_001548375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/375/GCA_001548375.1_ASM154837v1	26656223	NIES-3756
Porphyromonas gingivalis SJD4	1297564	PRJNA205613	205613	FCB group	Bacteroidetes/Chlorobi group	2.24971	48.4	-	ASYM01	147	1967	1821	6/23/17	6/26/17	Scaffold	Shanghai Jiao Tong University School of Medicine	SAMN07255461	GCA_002206085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/085/GCA_002206085.1_SJD4	-	SJD4
Mycoplasma mycoides subsp. mycoides	2103	PRJNA272775	272775	Terrabacteria group	Tenericutes	1.19024	23.9	-	LAEX01	8	1153	987	3/20/15	4/3/17	Contig	International Livestock Research Institute	SAMN03286960	GCA_000959065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/065/GCA_000959065.1_ASM95906v1	26516405	Afade
Aliivibrio fischeri ZF-211	617135	PRJNA164727	164727	Proteobacteria	Gammaproteobacteria	4.0392	38.3	-	AJYI02	184	3691	3613	8/13/12	4/5/17	Scaffold	MIT	SAMN02470496	GCA_000287175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/175/GCA_000287175.2_ASM28717v2	22955834	ZF-211
Providencia rettgeri	587	PRJNA342046	342046	Proteobacteria	Gammaproteobacteria	4.88909	40.5377	chromosome:NZ_CP017671.1/CP017671.1; plasmid unnamed:NZ_CP017672.1/CP017672.1	-	2	4568	4303	11/10/16	8/14/17	Complete Genome	University of Technology Sydney	SAMN05734415	GCA_001874625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/625/GCA_001874625.1_ASM187462v1	28104655	RB151
Pasteurella multocida	747	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	2.34672	40.5	chromosome:CP023516.1	-	1	2252	2146	9/28/17	9/28/17	Complete Genome	US Food and Drug Administration 	SAMN07312428	GCA_002393385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/385/GCA_002393385.1_ASM239338v1	-	FDAARGOS_384
Burkholderia multivorans	87883	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	6.6076	67.1	-	JUWM01	1114	6616	5783	7/10/15	4/3/17	Contig	University of Washington	SAMN03197906	GCA_001058025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/025/GCA_001058025.1_ASM105802v1	26230489	701_BMUL
Borrelia burgdorferi 72a	476211	PRJNA21003	21003	Spirochaetes	Spirochaetia	1.26779	28.2336	plasmid 72a_cp26:NC_011974.1/CP001375.1; plasmid 72a_cp32-1:NC_011972.1/CP001381.1; plasmid 72a_cp32-10:NC_011967.1/CP001379.1; plasmid 72a_cp32-12:NC_011968.1/CP001372.1; plasmid 72a_cp32-13:NC_011965.1/CP001371.1; plasmid 72a_cp32-5:NC_011975.1/CP001376.1; plasmid 72a_cp32-7:NC_011970.1/CP001373.1; plasmid 72a_lp17:NC_012191.1/CP001382.1; plasmid 72a_lp28-4:NC_012172.1/CP001380.1; plasmid 72a_lp32-3:NC_011966.1/CP001378.1; plasmid 72a_lp36:NC_012186.1/CP001374.1; plasmid 72a_lp38:NC_012201.1/CP001377.1; plasmid 72a_lp54:NC_012193.1/CP001370.1	ABGJ02	19	1321	1219	10/10/07	3/6/17	Contig	J. Craig Venter Institute	SAMN02436171	GCA_000171755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/755/GCA_000171755.2_ASM17175v2	-	72a
Treponema pallidum subsp. pallidum	161	PRJNA271237	271237	Spirochaetes	Spirochaetia	1.13847	52.8	chromosome:NZ_CP010560.1/CP010560.1	-	1	1063	998	6/3/16	4/5/17	Chromosome	University of Washington	SAMN03273361	GCA_001655315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/315/GCA_001655315.1_ASM165531v1	-	Nichols Houston
Rhizobium leguminosarum bv. viciae Vh3	1079455	PRJNA169726	169726	Proteobacteria	Alphaproteobacteria	7.84862	60.7	-	ARDR01	87	7674	7282	4/19/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02441033	GCA_000373325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/325/GCA_000373325.1_ASM37332v1	-	Vh3
Clavibacter michiganensis subsp. michiganensis	33013	PRJNA331202	331202	Terrabacteria group	Actinobacteria	3.33144	72.7	-	MDHL01	1	3128	2953	5/19/17	5/24/17	Contig	University of California	SAMN05439590	GCA_002151005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/005/GCA_002151005.1_ASM215100v1	-	CAYO001
Brucella canis CNGB 1324	1198684	PRJNA176524	176524	Proteobacteria	Alphaproteobacteria	3.31376	57.2	-	AQMZ01	2	3357	3154	4/17/13	4/1/17	Contig	Broad Institute	SAMN01047735	GCA_000367285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/285/GCA_000367285.1_Bruc_cani_CNGB_1324_V1	-	CNGB 1324
Tatlockia micdadei	451	PRJNA380664	380664	Proteobacteria	Gammaproteobacteria	3.27677	40.5	chromosome:NZ_CP020614.1/CP020614.1	-	1	2923	2755	4/11/17	4/13/17	Complete Genome	University of Canterbury	SAMN06645977	GCA_002085715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/715/GCA_002085715.1_ASM208571v1	-	NZ2015
Tatlockia micdadei	451	PRJNA380664	380664	Proteobacteria	Gammaproteobacteria	3.25016	40.5	chromosome:NZ_CP020615.1/CP020615.1	-	1	2896	2714	4/11/17	4/13/17	Complete Genome	University of Canterbury	SAMN06645976	GCA_002085735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/735/GCA_002085735.1_ASM208573v1	-	NZ2016
Bradyrhizobium japonicum CCBAU 15517	1128254	PRJNA77219	77219	Proteobacteria	Alphaproteobacteria	9.91703	63.4	-	AJPY01	1129	10050	8694	5/3/12	5/18/17	Contig	China Agricultural University	SAMN02469482	GCA_000261565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/565/GCA_000261565.1_15517	22586130	CCBAU 15517
Microcystis aeruginosa TAIHU98	1134457	PRJNA81203	81203	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.84961	42.5	-	ANKQ01	4	4802	4340	1/3/13	3/31/17	Contig	"Institute of Hydrobiology, Chinese Academy of Sciences"	SAMN02469974	GCA_000330925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/925/GCA_000330925.1_MicAerT1.0	23766403	TAIHU98
Methanobrevibacter smithii TS94C	911128	PRJNA59693	59693	Euryarchaeota	Methanobacteria	1.91005	30.3	-	AELW01	50	1822	1700	2/17/11	3/30/17	Contig	Washington University in St.Louis	SAMN02436675	GCA_000190035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/035/GCA_000190035.2_ASM19003v2	21317366	TS94C
Streptococcus dysgalactiae	1334	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.025	39.3	-	JVMI01	62	1988	1858	7/10/15	4/3/17	Contig	University of Washington	SAMN03197494	GCA_001072165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/165/GCA_001072165.1_ASM107216v1	26230489	302_SDYS
Borrelia garinii IPT76	1408826	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.17702	28	-	AYAB01	295	1127	571	12/3/13	4/2/17	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378793	GCA_000501615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/615/GCA_000501615.1_BorGarIPT76	-	IPT76
Streptococcus mutans TCI-125	1074120	PRJNA71991	71991	Terrabacteria group	Firmicutes	1.86169	36.8	-	AGKM01	96	1868	1762	10/6/11	3/22/17	Contig	JCVI	SAMN02436444	GCA_000228885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/885/GCA_000228885.2_SMUT4-NEX_9-125	-	TCI-125
Streptococcus gordonii	1302	PRJNA279321	279321	Terrabacteria group	Firmicutes	2.1901	40.5	chromosome:NZ_CP017295.1/CP017295.1	-	1	2136	2029	9/28/16	4/5/17	Complete Genome	University of Madras	SAMN03445771	GCA_000970665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/665/GCA_000970665.2_ASM97066v2	-	IE35
Pedobacter sp. PACM 27299	1727164	PRJNA296935	296935	FCB group	Bacteroidetes/Chlorobi group	6.14729	40.5	chromosome:NZ_CP012996.1/CP012996.1	-	1	5222	5001	10/26/15	4/11/17	Complete Genome	Chung-Ang University	SAMN04112246	GCA_001412655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/655/GCA_001412655.1_ASM141265v1	-	PAMC 27299
Chlamydia psittaci 01DC12	1221877	PRJEB383	177690	PVC group	Chlamydiae	1.17856	39.0603	chromosome:NC_019391.1/HF545614.1; plasmid p01DC12:NC_019392.1/HF545615.1	-	2	1036	976	11/5/12	3/30/17	Chromosome	Moredun Research Institute	SAMEA2272414	GCA_000317995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/995/GCA_000317995.1_ASM31799v1	-	01DC12
Beggiatoa leptomitiformis	319938	PRJNA292821	292821	Proteobacteria	Gammaproteobacteria	4.2653	40.5	chromosome:NZ_CP012373.1/CP012373.1	-	1	3649	3453	10/2/15	4/17/17	Complete Genome	New England Biolabs	SAMN03988806	GCA_001305575.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/305/575/GCA_001305575.2_ASM130557v2	26659680	D-402
Tatlockia micdadei	451	PRJEB7312	264511	Proteobacteria	Gammaproteobacteria	3.31003	40.5	chromosome I:NZ_LN614830.1/LN614830.1	-	1	2964	2863	10/21/14	4/10/17	Complete Genome	INSTITUT PASTEUR	SAMEA2785665	GCA_000953635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/635/GCA_000953635.1_LMI	-	ATCC33218
Stenotrophomonas maltophilia ATCC 19867	1279018	PRJNA185300	185300	Proteobacteria	Gammaproteobacteria	4.42403	66.4	-	ARNB01	14	4085	3961	4/23/13	3/23/17	Scaffold	DOE Joint Genome Institute	SAMN02441648	GCA_000382065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/065/GCA_000382065.1_ASM38206v1	-	ATCC 19867
Comamonas testosteroni	285	PRJNA218484	218484	Proteobacteria	Betaproteobacteria	5.58322	61.1	-	AWTO01	212	5183	4935	10/1/14	4/2/17	Contig	Huazhong Agricultural University	SAMN03085424	GCA_000761355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/355/GCA_000761355.1_CDF1v1	-	DF1
Bacillus mycoides	1405	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.40086	35.4	-	MUAT01	157	5722	5368	3/3/17	3/6/17	Contig	Cornell University	SAMN05953533	GCA_002014695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/695/GCA_002014695.1_ASM201469v1	-	FSL E2-0214
Yersinia frederiksenii	29484	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	5.17931	47.8	-	CQBG01	75	4963	4710	3/22/15	4/4/17	Scaffold	SC	SAMEA859851	GCA_001150525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/525/GCA_001150525.1_4840_7_2	-	BR166/97
Yersinia kristensenii	28152	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.68119	47.9	-	NHOF01	127	4482	4244	6/9/17	6/12/17	Scaffold	FDA/CFSAN	SAMN06330404	GCA_002188895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/895/GCA_002188895.1_ASM218889v1	-	CFSAN060539
Bifidobacterium bifidum	1681	PRJNA263318	263318	Terrabacteria group	Actinobacteria	2.19182	62.8	-	JSDS01	8	1895	1723	6/5/15	4/3/17	Contig	University of Parma	SAMN03097399	GCA_001020255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/255/GCA_001020255.1_Bbif02v4	25523018	156B
Alteromonas macleodii	28108	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	3.79045	44.6	-	LUNO01	457	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534564	GCA_001626115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/115/GCA_001626115.1_ASM162611v1	27377622	-
Micrococcus luteus	1270	PRJNA397085	397085	Terrabacteria group	Actinobacteria	2.4881	73	-	NRSP01	2	2298	2155	9/8/17	9/11/17	Contig	Yeungnam University	SAMN07448211	GCA_002287775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/775/GCA_002287775.1_ASM228777v1	-	TYU2
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12611	41.2	-	CWEI01	78	2050	1874	6/24/15	3/26/17	Contig	SC	SAMEA1032750	GCA_001175025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/025/GCA_001175025.1_6903_8_53	-	EQUI0198
Helicobacter pullorum	35818	PRJNA251887	251887	Proteobacteria	delta/epsilon subdivisions	2.13135	33.9	-	JNOC01	229	2204	2046	9/24/15	4/4/17	Scaffold	"National Institute of Health, Portugal"	SAMN02841092	GCA_001298055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/055/GCA_001298055.1_ASM129805v1	-	229334/12
Haemophilus parasuis gx033	1138429	PRJNA82233	82233	Proteobacteria	Gammaproteobacteria	2.12779	39.8	-	AOSU01	121	2181	1936	4/8/13	4/2/17	Contig	Guangxi Veterinary Research Institute	SAMN02469856	GCA_000478405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/405/GCA_000478405.1_gx033	23704176	gx033
Mannheimia varigena USDA-ARS-USMARC-1296	1433287	PRJNA230566	230566	Proteobacteria	Gammaproteobacteria	2.24524	40.5	chromosome:NZ_CP006943.1/CP006943.1	-	1	2170	2050	1/22/14	4/9/17	Complete Genome	USDA-ARS-USMARC	SAMN03081506	GCA_000521655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/655/GCA_000521655.1_ASM52165v1	-	USDA-ARS-USMARC-1296
Lactobacillus rhamnosus	47715	PRJNA378121	378121	Terrabacteria group	Firmicutes	2.96074	46.7	chromosome:CP020016.1	-	1	2974	2814	3/13/17	3/13/17	Chromosome	The University of Hong Kong	SAMN06479972	GCA_002025085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/085/GCA_002025085.1_ASM202508v1	-	WQ2
Mannheimia varigena USDA-ARS-USMARC-1312	1434214	PRJNA230707	230707	Proteobacteria	Gammaproteobacteria	2.13193	40.5	chromosome:NZ_CP006944.1/CP006944.1	-	1	2026	1914	1/22/14	4/9/17	Complete Genome	USDA-ARS-USMARC	SAMN03081507	GCA_000521695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/695/GCA_000521695.1_ASM52169v1	-	USDA-ARS-USMARC-1312
Vibrio splendidus	29497	PRJEB14357	329206	Proteobacteria	Gammaproteobacteria	5.41425	44.2	-	FLQQ01	56	4819	4587	7/16/16	7/11/17	Contig	UVEG	SAMEA4028999	GCA_900089845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/845/GCA_900089845.1_VhemicentrotiCECT8714_SPAdes_Prokka	-	CECT 8714
Streptococcus gordonii str. Challis substr. CH1	467705	PRJNA66	66	Terrabacteria group	Firmicutes	2.19666	40.5	chromosome:NC_009785.1/CP000725.1	-	1	2135	2018	9/11/07	3/30/17	Complete Genome	TIGR	SAMN02603977	GCA_000017005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/005/GCA_000017005.1_ASM1700v1	17720781	Challis substr. CH1
Enterococcus casseliflavus	37734	PRJNA270385	270385	Terrabacteria group	Firmicutes	3.47262	42.4	-	JXKK01	72	3410	3263	11/25/16	4/6/17	Scaffold	Inner Mongolia Agricultural University	SAMN03267167	GCA_001885845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/845/GCA_001885845.1_ASM188584v1	-	DSM 20680
Bacillus megaterium	1404	PRJNA305248	305248	Terrabacteria group	Firmicutes	5.05164	38.1	-	LODM01	12	5216	4870	5/9/16	4/5/17	Contig	Federico II University of Naples	SAMN04320986	GCA_001640745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/745/GCA_001640745.1_ASM164074v1	-	SF185
Clostridium sporogenes	1509	PRJNA278445	278445	Terrabacteria group	Firmicutes	3.96802	28.2	-	LLZT01	85	3784	3479	11/17/15	4/4/17	Contig	Illinois Institute of Technology	SAMN03418527	GCA_001444595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/595/GCA_001444595.1_ASM144459v1	26519392	PA 3679
Pasteurella multocida subsp. multocida	44283	PRJNA355236	355236	Proteobacteria	Gammaproteobacteria	2.46304	40.4604	chromosome:NZ_CP020345.1/CP020345.1; plasmid unnamed:NZ_CP020346.1/CP020346.1	-	2	2416	2210	3/22/17	3/24/17	Complete Genome	INRA	SAMN06140953	GCA_002059225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/225/GCA_002059225.1_ASM205922v1	-	CIRMBP-0884
Bacteroides ovatus	28116	PRJEB15677	347460	FCB group	Bacteroidetes/Chlorobi group	5.86266	41.8	-	FMYE01	125	4654	4307	10/20/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192581	GCA_900102645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/645/GCA_900102645.1_IMG-taxon_2654588143_annotated_assembly	-	NLAE-zl-C500
Bacteroides uniformis	820	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	4.78473	46.5	-	CZBF01	16	3967	3794	10/1/15	4/4/17	Contig	SC	SAMEA3545405	GCA_001406715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/715/GCA_001406715.1_14207_7_65	-	2789STDY5834942
Treponema denticola SP32	999436	PRJNA64923	64923	Spirochaetes	Spirochaetia	2.99028	37.9	-	AHAC01	6	2879	2715	6/19/13	4/1/17	Scaffold	Broad Institute	SAMN02596780	GCA_000413095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/095/GCA_000413095.1_Trep_dent_SP32_F0464_V1	-	SP32
Bordetella bronchiseptica 00-P-2796	1331199	PRJNA202111	202111	Proteobacteria	Betaproteobacteria	5.55178	67.9	-	JGWH01	179	5368	5111	5/1/14	4/2/17	Contig	JCVI	SAMN02231538	GCA_000662095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/095/GCA_000662095.1_gbb03v01	25908122	00-P-2796
Chlamydophila pneumoniae LPCoLN	406984	PRJNA17947	17947	PVC group	Chlamydiae	1.24855	40.4548	chromosome:NC_017285.1/CP001713.1; plasmid unnamed:NC_017286.1/CP001714.1	-	2	1115	1013	11/20/09	3/29/17	Complete Genome	TIGR	SAMN02604061	GCA_000024145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/145/GCA_000024145.1_ASM2414v1	19749045	LPCoLN
Mesorhizobium loti	381	PRJNA322736	322736	Proteobacteria	Alphaproteobacteria	6.57782	62.9	-	LYTJ01	26	6389	6116	6/20/16	4/5/17	Contig	Curtin University	SAMN05172962	GCA_001672365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/365/GCA_001672365.1_ASM167236v1	-	NZP2014
Pasteurella multocida subsp. septica	115545	PRJNA355236	355236	Proteobacteria	Gammaproteobacteria	2.4809	40.4269	chromosome:CP020347.1; plasmid unnamed1:CP020348.1; plasmid unnamed2:CP020349.1	-	3	2410	2162	3/22/17	3/22/17	Complete Genome	INRA	SAMN06140952	GCA_002068175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/068/175/GCA_002068175.1_ASM206817v1	-	CIRMBP-0873
[Haemophilus] ducreyi	730	PRJEB16819	350988	Proteobacteria	Gammaproteobacteria	1.57656	37.8	-	FOJC01	18	1543	1386	10/29/16	4/5/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02983000	GCA_900109315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/315/GCA_900109315.1_IMG-taxon_2597490374_annotated_assembly	-	ATCC 33940
Streptococcus gordonii	1302	PRJNA280676	280676	Terrabacteria group	Firmicutes	2.1578	40.6	-	LAWJ01	67	2080	1976	3/11/16	4/5/17	Contig	University of Malaya	SAMN03480683	GCA_001588935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/935/GCA_001588935.1_ASM158893v1	-	M5
Pasteurella multocida	747	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	2.33548	40.4022	chromosome:NZ_CP020405.1/CP020405.1; plasmid unnamed1:NZ_CP020404.1/CP020404.1	-	2	2193	2076	3/29/17	4/6/17	Complete Genome	US Food and Drug Administration 	SAMN04875555	GCA_002073255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/255/GCA_002073255.1_ASM207325v1	-	FDAARGOS_218
Chryseobacterium taklimakanense	536441	PRJEB6403	251923	FCB group	Bacteroidetes/Chlorobi group	2.76488	40.4	chromosome 1:NZ_LT906465.1/LT906465.1	-	1	2648	2554	8/15/17	8/28/17	Complete Genome	SC	SAMEA4412677	GCA_900187185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/185/GCA_900187185.1_50618_E01	-	NCTC13490
Lactobacillus gasseri	1596	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.07964	34.9	-	JVGG01	72	2044	1813	7/10/15	4/3/17	Contig	University of Washington	SAMN03197652	GCA_001064985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/985/GCA_001064985.1_ASM106498v1	26230489	459_LHEL
Pasteurella multocida	747	PRJEB6403	251923	Proteobacteria	Gammaproteobacteria	2.27095	40.4	chromosome 1:NZ_LT906458.1/LT906458.1	-	1	2130	2025	8/15/17	8/28/17	Complete Genome	SC	SAMEA4521464	GCA_900187275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/275/GCA_900187275.1_51765_F01	-	NCTC10322
Chlamydia muridarum str. Weiss	647227	PRJNA38161	38161	PVC group	Chlamydiae	1.07093	40.2	-	ACOW01	5	-	-	6/4/09	12/5/13	Contig	UMIGS	SAMN02436017	GCA_000174995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/995/GCA_000174995.1_ASM17499v1	19470744	Weiss
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.00362	41.7	-	JJPX01	199	3427	3228	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708964	GCA_000979095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/095/GCA_000979095.1_gtlEnvA5udCFS	25756680	3.H.M.2.7
Anaplasma phagocytophilum str. ApWI1	1359155	PRJNA212467	212467	Proteobacteria	Alphaproteobacteria	1.49707	41.6	-	LAOF01	1	1201	1071	3/27/15	4/3/17	Contig	IGS	SAMN02666742	GCA_000964945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/945/GCA_000964945.1_ASM96494v1	-	ApWI1
Leuconostoc mesenteroides	1245	PRJDB3305	267472	Terrabacteria group	Firmicutes	1.85932	37.8	-	BBPK01	41	1857	1723	11/19/14	4/2/17	Contig	World Institute of Kimchi	SAMD00022975	GCA_000787735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/735/GCA_000787735.1_ASM78773v1	-	Wikim17
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.15777	39.9	-	FPLX01	3	1053	956	5/10/17	5/24/17	Contig	WTSI	SAMEA1094349	GCA_900118695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/695/GCA_900118695.1_7067_6_49	-	C21_98
Bacteroides thetaiotaomicron	818	PRJEB8679	282634	FCB group	Bacteroidetes/Chlorobi group	6.77137	42.8	-	CVOZ01	407	-	-	5/6/15	5/6/15	Contig	WASHINGTON UNIVERSITY CENTER FOR GENOME SCIENCES	SAMEA3334962	GCA_001049555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/555/GCA_001049555.1_7330	-	-
Lactobacillus acidophilus DSM 20079 = JCM 1132 = NBRC 13951	1423717	PRJDB1353	231410	Terrabacteria group	Firmicutes	1.95527	34.6	-	BCVR01	18	1944	1807	2/27/16	4/5/17	Contig	National Institute of Technology and Evaluation	SAMD00046914	GCA_001591845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/845/GCA_001591845.1_ASM159184v1	-	NBRC 13951
Bartonella henselae	38323	PRJNA295147	295147	Proteobacteria	Alphaproteobacteria	1.83969	38	-	LOAA01	74	1666	1459	1/4/17	4/10/17	Contig	Anses UMR BIPAR	SAMN04286622	GCA_001932135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/135/GCA_001932135.1_ASM193213v1	-	A71
Streptococcus gordonii	1302	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.22247	40.4	chromosome:NZ_CP020450.1/CP020450.1	-	1	2185	1945	3/29/17	4/11/17	Complete Genome	US Food and Drug Administration 	SAMN04875583	GCA_002073435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/435/GCA_002073435.1_ASM207343v1	-	FDAARGOS_257
Pasteurella multocida	747	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	2.29516	40.4	chromosome:NZ_CP020403.1/CP020403.1	-	1	2157	2042	3/29/17	4/6/17	Complete Genome	US Food and Drug Administration 	SAMN04875553	GCA_002073295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/295/GCA_002073295.1_ASM207329v1	-	FDAARGOS_216
Mannheimia haemolytica PHL213	272629	PRJNA221	221	Proteobacteria	Gammaproteobacteria	2.67281	41.4	-	AASA01	103	2672	2495	7/25/06	3/30/17	Scaffold	Baylor College of Medicine	SAMN02469325	GCA_000153645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/645/GCA_000153645.1_ASM15364v1	17015664	PHL213
Lactobacillus brevis ATCC 14869 = DSM 20054	649758	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.47444	46	-	AZCP01	11	2457	2346	11/6/15	4/4/17	Scaffold	Shanghai Majorbio	SAMN02369420	GCA_001433855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/855/GCA_001433855.1_ASM143385v1	26415554	DSM 20054
Mycoplasma gallisepticum	2096	PRJNA325637	325637	Terrabacteria group	Tenericutes	0.948816	31.4	-	MAGR01	69	794	661	6/24/16	4/21/17	Contig	University of Georgia	SAMN05282146	GCA_001676505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/505/GCA_001676505.1_ASM167650v1	-	K6372
Pasteurella multocida	747	PRJNA352138	352138	Proteobacteria	Gammaproteobacteria	2.36066	40.4	chromosome:NZ_CP017961.1/CP017961.1	-	1	2237	2053	11/10/16	4/5/17	Complete Genome	Friedrich-Loeffler-Institut	SAMN05967336	GCA_001874445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/445/GCA_001874445.1_ASM187444v1	-	Razi_Pm0001
Pasteurella multocida OH1905	1304890	PRJNA192965	192965	Proteobacteria	Gammaproteobacteria	2.27169	40.4	chromosome:NZ_CP004392.1/CP004392.1	-	1	2136	1996	4/20/15	4/3/17	Complete Genome	"University of California, Davis, School of Veterinary Medicine"	SAMN03492042	GCA_000973565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/565/GCA_000973565.1_ASM97356v1	-	OH1905
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.82323	67.1	-	LOWO01	77	6233	5933	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449236	GCA_001523965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/965/GCA_001523965.1_ASM152396v1	-	FL-2-5-30-S1-D0
Pasteurella multocida	747	PRJNA244572	244572	Proteobacteria	Gammaproteobacteria	2.27184	40.4	chromosome:NZ_CP008918.1/CP008918.1	-	1	2128	2021	9/12/14	4/2/17	Complete Genome	Los Alamos National Laboratory	SAMN02904551	GCA_000754275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/275/GCA_000754275.1_ASM75427v1	25342682	ATCC 43137
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.50617	32.6	-	CUGU01	98	2500	2365	3/31/15	3/26/17	Contig	SC	SAMEA1035151	GCA_001224425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/425/GCA_001224425.1_7068_7_52	-	103709
Brucella ovis F8/05B	1198678	PRJNA176518	176518	Proteobacteria	Alphaproteobacteria	3.26703	57.2	-	AQNQ01	35	3387	2969	4/16/13	4/1/17	Contig	Broad Institute	SAMN01047729	GCA_000367085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/085/GCA_000367085.1_Bruc_ovis_F8_05B_V1	-	F8/05B
Mycoplasma bovis	28903	PRJNA306895	306895	Terrabacteria group	Tenericutes	0.976786	29.3	-	LQDH01	85	855	747	1/4/17	4/6/17	Contig	"University of California, Davis"	SAMN04366503	GCA_001930035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/035/GCA_001930035.1_ASM193003v1	-	2255MB
Proteus mirabilis	584	PRJNA244573	244573	Proteobacteria	Gammaproteobacteria	3.99401	38.8	-	JOVJ01	1	3721	3555	9/16/14	4/2/17	Scaffold	Los Alamos National Laboratory	SAMN02870743	GCA_000755485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/485/GCA_000755485.1_ASM75548v1	25342681	ATCC 7002
Mannheimia varigena USDA-ARS-USMARC-1388	1434215	PRJNA230708	230708	Proteobacteria	Gammaproteobacteria	2.22829	40.4	chromosome:NZ_CP006953.1/CP006953.1	-	1	2137	2007	1/22/14	4/9/17	Complete Genome	USDA-ARS-USMARC	SAMN03081508	GCA_000521685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/685/GCA_000521685.1_ASM52168v1	-	USDA-ARS-USMARC-1388
Cronobacter sakazakii	28141	PRJNA251804	251804	Proteobacteria	Gammaproteobacteria	4.538	56.9	-	JOLM01	62	4421	4190	10/9/15	4/4/17	Scaffold	"Nottingham Trent University, UK"	SAMN02840782	GCA_001309135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/135/GCA_001309135.1_ASM130913v1	26438044	694
Klebsiella oxytoca	571	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.6549	57.1	-	LEUQ01	7	5704	5458	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280220	GCA_001030715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/715/GCA_001030715.1_Kleb_oxyt_CHS153_V1	-	CHS153
Erwinia amylovora MR1	1255310	PRJEB607	196605	Proteobacteria	Gammaproteobacteria	3.8132	53.3761	plasmid pEA29:HF560649.1	CAPE01	30	4122	4047	4/8/13	1/30/15	Contig	CeBiTec	SAMEA2272039	GCA_000367685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/685/GCA_000367685.2_ASM36768v2	-	MR1
Clostridium beijerinckii	1520	PRJNA322802	322802	Terrabacteria group	Firmicutes	6.22013	29.6	-	LZZB01	393	5478	5258	2/23/17	2/25/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05170523	GCA_002006435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/435/GCA_002006435.1_ASM200643v1	-	NRRL B-596
Streptomyces scabiei	1930	PRJNA293375	293375	Terrabacteria group	Actinobacteria	9.87953	71.1	-	MVNW01	1566	8952	7660	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06346051	GCA_002155765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/765/GCA_002155765.1_ASM215576v1	-	NRRL B-24093
Lactobacillus salivarius DSM 20555 = ATCC 11741	1423799	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.9826	32.5	-	AYYT01	62	1945	1851	11/6/15	4/4/17	Contig	Shanghai Majorbio	SAMN02369414	GCA_001435955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/955/GCA_001435955.1_ASM143595v1	26415554	DSM 20555
Bacillus clausii	79880	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.457	44.5	-	NPCC01	80	4457	4336	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372703	GCA_002272535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/535/GCA_002272535.1_assembly-7539_v1	-	7539
Moraxella catarrhalis RH4	749219	PRJNA175869	175869	Proteobacteria	Gammaproteobacteria	1.83669	41.6	-	AMSO01	9	1719	1617	10/2/12	3/30/17	Contig	Radboud University Medical Center	SAMN02470825	GCA_000302495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/495/GCA_000302495.1_RH4.0	23209224	RH4
Pasteurella multocida subsp. multocida str. HB03	1147130	PRJNA83131	83131	Proteobacteria	Gammaproteobacteria	2.30768	40.4	chromosome:NZ_CP003328.1/CP003328.1	-	1	2158	2050	12/31/13	4/2/17	Complete Genome	Huazhong Agricultural University	SAMN02641508	GCA_000512395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/395/GCA_000512395.1_ASM51239v1	-	HB03
Bifidobacterium breve	1685	PRJNA272085	272085	Terrabacteria group	Actinobacteria	2.35844	58.6	-	LRPP01	29	2097	1909	2/2/16	4/4/17	Scaffold	The Genome Institute at Washington University	SAMN03842221	GCA_001546235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/235/GCA_001546235.1_ASM154623v1	-	GED8481
Parabacteroides distasonis	823	PRJEB8305	276435	FCB group	Bacteroidetes/Chlorobi group	5.0782	46.9	-	CDRG01	1920	-	-	2/24/15	2/24/15	Contig	CGS-GL	SAMEA3218009	GCA_000947355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/355/GCA_000947355.1_2b7B_assembly	-	2b7B
Bacillus weihenstephanensis	86662	PRJNA318339	318339	Terrabacteria group	Firmicutes	5.67525	35.2	-	LXLS01	126	5970	5547	10/12/16	4/5/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04819584	GCA_001757985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/985/GCA_001757985.1_ASM175798v1	-	GOE7
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.22024	36.7	-	LPRH01	17	2332	2201	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305141	GCA_001560045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/045/GCA_001560045.1_GG12_C01_07	-	GG12-C01-07
Streptococcus sanguinis SK1087	888824	PRJNA53189	53189	Terrabacteria group	Firmicutes	2.31502	43.2	-	AFDP01	7	2312	2212	4/15/11	3/30/17	Scaffold	Baylor College of Medicine	SAMN00253322	GCA_000204475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/475/GCA_000204475.1_ASM20447v1	-	SK1087
Staphylococcus saprophyticus	29385	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.59918	32.9	-	LNNE01	39	2526	2370	9/28/16	4/5/17	Contig	Tufts University	SAMN04244259	GCA_001747975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/975/GCA_001747975.1_ASM174797v1	-	396A
Vibrio sp. J2-6	1507974	PRJEB5889	284695	Proteobacteria	Gammaproteobacteria	5.37874	44.5	-	CCKA01	63	4722	4599	5/20/15	4/10/17	Scaffold	STATION BIOLOGIQUE DE ROSCOFF	SAMEA2593999	GCA_001243735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/735/GCA_001243735.1_VRSK6v1_PRJEB5889	-	J2-6
Bacillus coagulans P38	1398086	PRJNA218161	218161	Terrabacteria group	Firmicutes	3.37432	46.4	-	JSVI01	137	3377	3188	11/7/14	4/2/17	Contig	Chinese Academy of Life Sciences	SAMN03159544	GCA_000773655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/655/GCA_000773655.1_P38-1	"2,409,628,325,999,580"	P38
Paenibacillus polymyxa	1406	PRJNA171204	171204	Terrabacteria group	Firmicutes	5.90824	45.1	-	ALJV01	277	5438	5094	9/3/13	4/2/17	Contig	China Agricultural University	SAMN02471156	GCA_000463565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/565/GCA_000463565.1_S6	24146630	WLY78
Yersinia intermedia	631	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	5.16794	47.4	-	CWJO01	24	4847	4625	7/8/15	4/4/17	Scaffold	SC	SAMEA859966	GCA_001244675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/675/GCA_001244675.1_5139_5_2	-	FE80200
Pseudomonas stutzeri SDM-LAC	1109445	PRJNA74741	74741	Proteobacteria	Gammaproteobacteria	4.23321	60.6	-	AGSX01	199	3951	3746	11/17/11	5/19/17	Contig	Shan Dong University	SAMN02470922	GCA_000235745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/745/GCA_000235745.2_ASM23574v2	22275095	SDM-LAC
Aeromonas hydrophila SSU	1073377	PRJNA71509	71509	Proteobacteria	Gammaproteobacteria	4.94106	61.5	-	AGWR01	2	4588	4422	9/17/12	5/18/17	Scaffold	Broad Institute	SAMN02463947	GCA_000298055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/055/GCA_000298055.1_Aero_hydr_SSU_V1	-	SSU
Propionibacterium freudenreichii	1744	PRJEB6445	270209	Terrabacteria group	Actinobacteria	2.50207	67.3	-	CDAG01	38	2224	2085	3/21/15	4/4/17	Scaffold	INRA STLO	SAMEA2825568	GCA_001369075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/369/075/GCA_001369075.1_CIRM-BIA456	-	CIRM-BIA 456
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.91791	67.1	-	LOTF01	84	7158	6797	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449141	GCA_001522235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/235/GCA_001522235.1_ASM152223v1	-	RF23-BP58
Campylobacter concisus	199	PRJNA280466	280466	Proteobacteria	delta/epsilon subdivisions	1.87228	37.5	-	NDYP01	20	1909	1792	6/4/17	6/6/17	Contig	Institute of Environmental Science and Research (ESR)	SAMN03457018	GCA_002165775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/775/GCA_002165775.1_ASM216577v1	-	Lasto64.99
Finegoldia magna	1260	PRJNA383659	383659	Terrabacteria group	Firmicutes	1.92694	31.8	-	NDYE01	34	1896	1777	8/7/17	8/9/17	Contig	Aarhus University	SAMN06769906	GCA_002243195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/195/GCA_002243195.1_ASM224319v1	-	12T273
Lysinibacillus sphaericus	1421	PRJNA253155	253155	Terrabacteria group	Firmicutes	4.60385	37.6	-	JPDM01	445	4569	4269	7/25/14	4/2/17	Scaffold	"Wuhan Institute of Virology, Chinese Academy of Sciences"	SAMN02867719	GCA_000733585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/585/GCA_000733585.1_ASM73358v1	-	NRS1693
Flavobacterium psychrophilum	96345	PRJNA262095	262095	FCB group	Bacteroidetes/Chlorobi group	2.89981	32.5	-	JRWA01	9	2603	2125	12/16/14	4/2/17	Contig	Washington State University	SAMN03079813	GCA_000801635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/635/GCA_000801635.1_ASM80163v1	26377311	CSF-259-93
Clostridium butyricum	1492	PRJEB4752	230343	Terrabacteria group	Firmicutes	4.74291	28.7	-	CBYK01	26	4374	3057	2/12/14	4/4/17	Contig	URMITE	SAMEA3146292	GCA_001458815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/815/GCA_001458815.1_CBut	-	NEC8
Akkermansia muciniphila	239935	PRJEB21068	396410	PVC group	Verrucomicrobia	2.6724	55.8	-	FXYB01	104	2338	2247	7/29/17	8/7/17	Scaffold	"WAGENINGEN UNIVERSITY, LABORATORY OF SYSTEMS AND SYNTHETIC BIOLOGY."	SAMEA104102611	GCA_900185005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/005/GCA_900185005.1_Reindeer.fasta	-	-
Rhodococcus erythropolis	1833	PRJNA341585	341585	Terrabacteria group	Actinobacteria	7.24235	62.3	-	MRCL01	92	6711	6479	9/15/17	9/18/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05788061	GCA_002303875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/875/GCA_002303875.1_ASM230387v1	-	ACN1
Lactobacillus johnsonii	33959	PRJNA316010	316010	Terrabacteria group	Firmicutes	1.97226	34.7	-	NIBD01	95	2029	1793	8/25/17	8/28/17	Contig	University of Minnesota	SAMN04573238	GCA_002269965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/965/GCA_002269965.1_ASM226996v1	-	UMNLJ114
Lactobacillus sakei	1599	PRJNA343164	343164	Terrabacteria group	Firmicutes	1.92507	41.1	-	MKDI01	73	1947	1829	2/1/17	4/10/17	Contig	ETH Zurich	SAMN05717732	GCA_001981835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/835/GCA_001981835.1_ASM198183v1	-	RI-410
Xanthomonas albilineans	29447	PRJNA270034	270034	Proteobacteria	Gammaproteobacteria	3.54903	63.1	-	JZIK01	4	3018	2764	3/25/15	4/3/17	Scaffold	CIRAD	SAMN03262642	GCA_000963155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/155/GCA_000963155.1_Xal-Xa23R1-G1	26213974	Xa23R1
Mycobacterium intracellulare 1956	1299331	PRJNA191795	191795	Terrabacteria group	Actinobacteria	5.48906	68.1	-	JAOG01	3	6049	6001	1/27/14	2/22/14	Contig	Institute for Genome Sciences	SAMN02641611	GCA_000523815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/815/GCA_000523815.1_ASM52381v1	-	1956
Escherichia albertii	208962	PRJDB3047	301492	Proteobacteria	Gammaproteobacteria	4.51143	49.8	-	BBVK01	70	4525	4236	11/6/15	2/25/17	Scaffold	University of Miyazaki	SAMD00026645	GCA_001514685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/685/GCA_001514685.1_ASM151468v1	26537224	NIAH_Bird_2
Caldicellulosiruptor bescii	31899	PRJEB20917	389542	Terrabacteria group	Firmicutes	2.94637	35.2	-	FXXE01	3	2852	2632	6/9/17	6/21/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216291	GCA_900184185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/184/185/GCA_900184185.1_IMG-taxon_2663762792_annotated_assembly	-	MACB1017
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.73942	47.6	-	MDZT01	81	3442	3276	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320395	GCA_001882625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/625/GCA_001882625.1_ASM188262v1	-	92/5354-1
Streptococcus equinus	1335	PRJEB16983	351120	Terrabacteria group	Firmicutes	1.99106	37.5	-	FOEX01	27	1963	1882	10/29/16	4/5/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216346	GCA_900110845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/845/GCA_900110845.1_IMG-taxon_2654588130_annotated_assembly	-	Sb18
Variovorax paradoxus	34073	PRJNA314555	314555	Proteobacteria	Betaproteobacteria	6.89022	67.5	-	LVHG01	116	6523	6260	5/17/16	4/5/17	Scaffold	Korea Research Institute of Bioscience and Biotechnology (KRIBB)	SAMN04545447	GCA_001645605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/605/GCA_001645605.1_ASM164560v1	-	KB5
Pectobacterium carotovorum subsp. odoriferum	78398	PRJNA259700	259700	Proteobacteria	Gammaproteobacteria	5.4726	51.5	-	JQOF01	223	5132	4816	9/15/14	4/2/17	Contig	Food and Environment Research Agency	SAMN03010638	GCA_000754715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/715/GCA_000754715.1_ASM75471v1	-	NCPPB3841
Mycobacterium kansasii	1768	PRJNA317047	317047	Terrabacteria group	Actinobacteria	6.14184	66.2	-	LWCJ01	164	5671	5189	4/27/16	4/5/17	Contig	University of Lodz	SAMN04599332	GCA_001632915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/915/GCA_001632915.1_Mkan_typeIII_1.0	27257194	1010001468
Brachyspira hyodysenteriae	159	PRJNA272555	272555	Spirochaetes	Spirochaetia	3.00262	27	-	JXNI01	135	2622	2471	5/26/15	4/3/17	Scaffold	Murdoch University	SAMN03285450	GCA_001013045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/013/045/GCA_001013045.1_ASM101304v1	26098837	G44
Lactobacillus crispatus	47770	PRJNA290636	290636	Terrabacteria group	Firmicutes	2.34395	36.8	-	LJOL01	253	2470	2195	1/26/16	4/4/17	Contig	Vaginal Microbiome Consortium	SAMN03893604	GCA_001541505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/505/GCA_001541505.1_ASM154150v1	26747455	VMC6
Aggregatibacter actinomycetemcomitans serotype d str. SA508	1434262	PRJNA230863	230863	Proteobacteria	Gammaproteobacteria	1.94301	45.5	-	AZTU01	549	1945	1788	3/23/16	4/5/17	Contig	"Bumgarner laboratory, Department of Microbiology, University of Washington"	SAMN04573009	GCA_001596255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/255/GCA_001596255.1_SA508v1.0	-	SA508
Rothia mucilaginosa	43675	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.27564	59.5	-	JVNP01	14	1813	1736	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197461	GCA_001064265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/265/GCA_001064265.1_ASM106426v1	26230489	268_RMUC
Lactobacillus jensenii MD IIE-70(2)	1381119	PRJNA213997	213997	Terrabacteria group	Firmicutes	1.75988	34.3	-	AVCU01	60	1704	1134	9/13/13	4/2/17	Contig	Kingston Uniiversity	SAMN02298798	GCA_000466805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/805/GCA_000466805.1_ASM46680v1	24285651	MD IIE-70(2)
Lactobacillus ruminis DSM 20403 = NBRC 102161	1423798	PRJEB17328	351503	Terrabacteria group	Firmicutes	2.03806	43.4	-	FOPI01	58	2111	1855	10/31/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910432	GCA_900113455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/455/GCA_900113455.1_IMG-taxon_2593339155_annotated_assembly	-	DSM 20403
Gardnerella vaginalis JCP8017B	1261063	PRJNA181318	181318	Terrabacteria group	Actinobacteria	1.60225	42	-	ATJM01	158	1411	1260	6/25/13	4/10/17	Scaffold	Washington University	SAMN02436773	GCA_000414585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/585/GCA_000414585.1_ASM41458v1	-	JCP8017B
Bifidobacterium pseudocatenulatum	28026	PRJNA349794	349794	Terrabacteria group	Actinobacteria	2.37266	56.9	-	MNLB01	51	2031	1848	8/28/17	8/30/17	Contig	University of Parma	SAMN05933032	GCA_002271255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/255/GCA_002271255.1_Bpse1Ev1	28837128	1E
Lactobacillus paracasei subsp. paracasei Lpp226	1256226	PRJNA178455	178455	Terrabacteria group	Firmicutes	3.00948	46.2	-	ANMN01	131	3158	2920	6/11/13	4/1/17	Contig	Danone Research	SAMN02469716	GCA_000409895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/895/GCA_000409895.1_Lpp226.v.1	23894338	Lpp226
Staphylococcus hominis	1290	PRJNA316465	316465	Terrabacteria group	Firmicutes	2.33937	31.4	-	LVVO01	148	2400	2234	5/24/16	4/5/17	Contig	UC Berkeley	SAMN04589099	GCA_001650655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/655/GCA_001650655.1_ASM165065v1	-	H69
Staphylococcus capitis	29388	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.34419	32.7	-	JUVR01	158	2284	2123	7/10/15	4/3/17	Contig	University of Washington	SAMN03197927	GCA_001074935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/935/GCA_001074935.1_ASM107493v1	26230489	722_SEPI
Staphylococcus warneri	1292	PRJNA278198	278198	Terrabacteria group	Firmicutes	2.54117	32.5	-	LDTT01	77	2481	2363	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401362	GCA_001477415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/415/GCA_001477415.1_ASM147741v1	26793183	SA9
Acinetobacter radioresistens	40216	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.80236	41.8	-	DCLH01	59	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451775	GCA_002320955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/955/GCA_002320955.1_ASM232095v1	28894102	-
Rhodococcus hoagii	43767	PRJNA316970	316970	Terrabacteria group	Actinobacteria	5.41525	68.6	-	LWTO01	61	5027	4886	4/17/17	6/6/17	Contig	The University of Edinburgh	SAMN04871648	GCA_002094265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/265/GCA_002094265.1_ASM209426v1	27638249	PAM1571
Lactobacillus iners SPIN 1401G	879295	PRJNA52029	52029	Terrabacteria group	Firmicutes	1.28103	32.5	-	AEXP01	52	1232	1157	4/15/11	3/30/17	Contig	J. Craig Venter Institute	SAMN00115034	GCA_000204435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/435/GCA_000204435.2_ASM20443v1	-	SPIN 1401G
Bacillus atrophaeus ATCC 49822-1	743710	PRJNA46283	46283	Terrabacteria group	Firmicutes	4.12643	43.1	-	AEFV01	31	4215	3992	4/19/11	6/15/17	Contig	Transformational Medical Technologies Program	SAMN01816420	GCA_000204845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/845/GCA_000204845.2_ASM20484v2	21464989	ATCC 49822-1
Klebsiella variicola	244366	PRJNA234120	234120	Proteobacteria	Gammaproteobacteria	5.77515	57.2	-	JMZM01	10	5813	5498	5/19/14	8/1/17	Scaffold	Broad Institute	SAMN02581253	GCA_000694775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/775/GCA_000694775.1_Kleb_pneu_MGH_80_V1	-	MGH 80
Ruminococcus flavefaciens	1265	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.44223	39.9	-	DBYI01	122	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06456571	GCA_002310115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/115/GCA_002310115.1_ASM231011v1	28894102	-
Acinetobacter nosocomialis	106654	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.96104	38.6	-	BBTP01	67	3787	3607	2/17/15	4/3/17	Contig	National Institute of Technology and Evaluation	SAMD00020347	GCA_000931795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/795/GCA_000931795.1_ASM93179v1	-	NBRC 110503
Streptomyces griseus subsp. rhodochrous	285575	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.02921	72.6	-	LGUZ01	102	7069	6771	8/19/15	3/11/17	Contig	University of Illinois	SAMN02900579	GCA_001270675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/675/GCA_001270675.1_ASM127067v1	-	NRRL B-2929
Streptococcus oralis	1303	PRJNA304333	304333	Terrabacteria group	Firmicutes	1.82628	41.3895	plasmid unnamed:NZ_CM003838.1/CM003838.1	LQZC01	15	1808	1711	3/2/16	4/5/17	Scaffold	University of Kaiserslautern	SAMN04325052	GCA_001579525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/525/GCA_001579525.1_ASM157952v1	27303717	DD25
Achromobacter xylosoxidans	85698	PRJNA285410	285410	Proteobacteria	Betaproteobacteria	6.51013	67.8	-	LDVK01	578	6150	5752	8/31/15	4/4/17	Contig	University of Queensland	SAMN03753629	GCA_001276025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/025/GCA_001276025.1_ASM127602v1	-	A9
Xanthomonas fuscans subsp. fuscans	366649	PRJNA264772	264772	Proteobacteria	Gammaproteobacteria	4.95536	64.9	-	JTKK02	136	4403	3920	12/1/14	4/3/17	Contig	University of Exeter	SAMN03142398	GCA_000788075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/075/GCA_000788075.2_NCPPB381v2	26500625	NCPPB 381
Pseudomonas syringae pv. tomato T1	546231	PRJNA19697	19697	Proteobacteria	Gammaproteobacteria	6.14594	58.6	-	ABSM01	122	5880	5600	11/21/08	5/19/17	Contig	The Sainsbury Laboratory	SAMN02472090	GCA_000172895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/895/GCA_000172895.1_ASM17289v1	19061402	T1
Pseudomonas savastanoi pv. fraxini	360922	PRJNA287460	287460	Proteobacteria	Gammaproteobacteria	6.26361	58	-	LIIC01	330	6155	5430	1/25/16	4/4/17	Contig	University of Edinburgh	SAMN03992201	GCA_001538155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/155/GCA_001538155.1_ASM153815v1	27145446	CFBP 5062
Acinetobacter calcoaceticus	471	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.89321	38.6	-	BBTM01	18	3775	3630	2/17/15	4/3/17	Contig	National Institute of Technology and Evaluation	SAMD00019676	GCA_000931735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/735/GCA_000931735.1_ASM93173v1	-	KCTC 2357
Acinetobacter junii	40215	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.29701	38.3	-	DGLC01	156	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457828	GCA_002387225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/225/GCA_002387225.1_ASM238722v1	28894102	-
Pseudoalteromonas sp. BSi20480	386428	PRJDA74513	74513	Proteobacteria	Gammaproteobacteria	4.14921	39.6	-	BADX01	201	3794	3474	10/26/11	5/19/17	Contig	Shandong University	SAMD00036593	GCA_000241365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/365/GCA_000241365.2_PspBSi20480_1.0	22275105	BSi20480
Vibrio alginolyticus E0666	1231058	PRJNA174757	174757	Proteobacteria	Gammaproteobacteria	5.04892	44.8	-	AMPD01	129	4751	4491	2/20/13	5/19/17	Contig	"Department of Laboratory Medicine, General Hospital of Jinan Military Region of PLA"	SAMN02469807	GCA_000341445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/445/GCA_000341445.1_VibrioE0666	23990586	E0666
Pediococcus acidilactici	1254	PRJNA308165	308165	Terrabacteria group	Firmicutes	1.7813	42.5	-	LQNR01	134	1755	1383	4/30/16	4/5/17	Contig	ICAR-National Research Centre on Camel	SAMN04387731	GCA_001634445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/445/GCA_001634445.1_ASM163444v1	-	NRCC2
Paraglaciecola psychrophila 170	1129794	PRJNA174842	174842	Proteobacteria	Gammaproteobacteria	5.41369	40.4	chromosome:NC_020514.1/CP003837.1	-	1	4891	4379	3/20/13	9/4/17	Complete Genome	"CAS Key Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences"	SAMN02603050	GCA_000347635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/635/GCA_000347635.1_ASM34763v1	23640379	170
Enterobacter asburiae	61645	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.94478	55.6	-	LDCH01	97	4942	4701	5/21/15	4/3/17	Contig	JCVI	SAMN03495970	GCA_001011705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/705/GCA_001011705.1_ASM101170v1	-	GN02127
Brucella sp. UK40/99	437684	PRJNA173594	173594	Proteobacteria	Alphaproteobacteria	3.37643	57.2	-	AQKW01	42	3447	3219	4/16/13	4/17/17	Scaffold	Broad Institute	SAMN00811228	GCA_000371065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/065/GCA_000371065.1_Bruc_sp_UK40_99_V1	-	UK40/99
Pseudomonas amygdali pv. ciccaronei	264452	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.75742	58.2	-	LJPY01	496	5416	4882	10/20/15	4/4/17	Scaffold	University of Toronto	SAMN03976288	GCA_001400755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/755/GCA_001400755.1_PccICMP5710	-	ICMP5710
Xanthomonas euvesicatoria	456327	PRJNA266604	266604	Proteobacteria	Gammaproteobacteria	5.10364	64.7	-	JSZH01	317	4654	4103	12/16/14	4/2/17	Contig	Institut de Recherche pour le Developpement	SAMN03164129	GCA_000802345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/345/GCA_000802345.1_XEU_83M_E1.0	25657284	83M
Acinetobacter pittii	48296	PRJNA271368	271368	Proteobacteria	Gammaproteobacteria	3.81121	38.8	-	JXAH01	20	3640	3502	1/12/15	4/2/17	Contig	Institute of Genomics and Integrative Biology	SAMN03274155	GCA_000817365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/365/GCA_000817365.1_ASM81736v1	-	TE2
Riemerella anatipestifer	34085	PRJNA309343	309343	FCB group	Bacteroidetes/Chlorobi group	2.10327	35	-	LUDG01	17	1967	1906	6/20/16	4/5/17	Contig	Sichuan Agricultural University	SAMN04431678	GCA_001670605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/670/605/GCA_001670605.1_RCAD0142	-	RCAD0142
Staphylococcus lugdunensis M23590	525377	PRJNA34653	34653	Terrabacteria group	Firmicutes	2.52367	33.7	-	AEQA01	8	2414	2297	12/27/10	3/30/17	Scaffold	Baylor College of Medicine	SAMN00139437	GCA_000185485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/485/GCA_000185485.1_ASM18548v1	-	M23590
Streptococcus anginosus T5	1163302	PRJDB80	219080	Terrabacteria group	Firmicutes	1.78922	39.1	-	BASY01	42	1739	1620	9/7/13	4/2/17	Contig	"Pediatric Dentistry, Tokyo Dental College"	SAMD00036763	GCA_000474155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/155/GCA_000474155.1_ASM47415v1	-	T5
Pantoea ananatis	553	PRJEB7511	270270	Proteobacteria	Gammaproteobacteria	4.34478	54.1	-	CVNF01	77	4044	3828	4/21/15	4/4/17	Contig	AUSTRIAN INSTITUTE OF TECHNOLOGY	SAMEA3303336	GCA_001369355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/369/355/GCA_001369355.1_Pantoea_ananatis_S6	-	S6
Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)	374675	PRJNA16198	16198	FCB group	Bacteroidetes/Chlorobi group	0.146184	24.1	-	AANL01	66	180	179	5/1/06	12/5/13	Contig	TIGR	SAMN02435872	GCA_000168155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/155/GCA_000168155.1_ASM16815v1	16729848	Hc (Homalodisca coagulata)
Streptococcus gallolyticus	315405	PRJEB16159	348919	Terrabacteria group	Firmicutes	2.17521	37.5	-	FNGN01	13	2134	2037	10/20/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487841	GCA_900103105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/105/GCA_900103105.1_IMG-taxon_2608642166_annotated_assembly	-	VTM3R24
Leptospira santarosai str. JET	1193057	PRJNA167237	167237	Spirochaetes	Spirochaetia	4.12817	41.6	-	AKWS02	82	4170	3796	10/17/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436486	GCA_000306475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/475/GCA_000306475.2_gls454071v02	-	JET
Citrobacter freundii	546	PRJNA273931	273931	Proteobacteria	Gammaproteobacteria	5.91169	51.5	-	JYFZ02	19	5970	5635	3/3/15	4/3/17	Scaffold	Walter Reed Army Institute of Research	SAMN03316840	GCA_000937505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/505/GCA_000937505.2_ASM93750v2	-	MRSN 12115
[Clostridium] clostridioforme	1531	PRJEB16792	350912	Terrabacteria group	Firmicutes	5.23658	49.1	-	FOJH01	157	5269	4815	10/29/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216528	GCA_900108895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/895/GCA_900108895.1_IMG-taxon_2654588144_annotated_assembly	-	NLAE-zl-G208
Fusobacterium necrophorum subsp. funduliforme	143387	PRJNA315619	315619	Fusobacteria	Fusobacteriia	2.0993	35.1	-	LVER01	83	2045	1931	3/25/16	4/5/17	Contig	Aarhus University	SAMN04569318	GCA_001597315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/315/GCA_001597315.1_ASM159731v1	-	LS_1266
Streptococcus parasanguinis	1318	PRJNA280685	280685	Terrabacteria group	Firmicutes	2.04242	41.9	-	LAWO01	117	1991	1899	3/11/16	4/5/17	Contig	University of Malaya	SAMN03480701	GCA_001588725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/725/GCA_001588725.1_ASM158872v1	-	POW10
Agrobacterium sp. LY4	477195	PRJNA205089	205089	Proteobacteria	Alphaproteobacteria	5.64221	59.8	-	ASYA01	55	5416	5128	1/22/16	4/16/17	Contig	Huazhong Agricultural University	SAMN04395162	GCA_001526585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/585/GCA_001526585.1_ASM152658v1	-	LY4
Haemophilus parainfluenzae	729	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.97825	39.4	-	JWCE01	56	1915	1811	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197082	GCA_001053915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/915/GCA_001053915.1_ASM105391v1	26230489	1128_HPAR
Actinomyces oris	544580	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.03948	68.8	-	MSKW01	36	2549	2418	1/5/17	4/6/17	Scaffold	King's College London	SAMN05898717	GCA_001937555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/555/GCA_001937555.1_ASM193755v1	-	G53E
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.85705	55.2	-	JTCB02	63	4774	4536	11/17/14	3/25/17	Contig	JCVI	SAMN03012832	GCA_000784075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/075/GCA_000784075.2_SPADES_assembly_of_Enterobacter_cloacae_ND18	-	ND18
Vibrio anguillarum	55601	PRJNA267092	267092	Proteobacteria	Gammaproteobacteria	4.20385	45.0866	chromosome I:CP011466.1; chromosome II:CP011467.1	-	2	3443	3350	2/7/17	2/7/17	Chromosome	University of Copenhagen	SAMN03177783	GCA_001989695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/695/GCA_001989695.1_ASM198969v1	-	PF430-3
Streptococcus parauberis	1348	PRJNA273857	273857	Terrabacteria group	Firmicutes	2.02305	35.5	-	NSGS01	15	2032	1982	9/27/17	9/27/17	Contig	Norfolk State University	SAMN05210280	GCA_002382925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/925/GCA_002382925.1_ASM238292v1	-	AZ70.1
Kingella kingae CC254	1305796	PRJEB1653	194473	Proteobacteria	Betaproteobacteria	1.99303	46.6	-	CBRT01	1	1864	1552	8/28/13	4/1/17	Scaffold	URMITE	SAMEA2272661	GCA_000470095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/095/GCA_000470095.1_CC254	-	CC254
Streptococcus pseudopneumoniae	257758	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.07871	39.8	-	JUPG01	208	2032	1889	7/10/15	4/3/17	Contig	University of Washington	SAMN03198094	GCA_001074825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/825/GCA_001074825.1_ASM107482v1	26230489	888_SPSE
Streptococcus cristatus	45634	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.18618	40.4	-	JUSY01	67	2131	2017	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197998	GCA_001074415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/415/GCA_001074415.1_ASM107441v1	26230489	787_SOLI
Xanthomonas perforans	442694	PRJNA276640	276640	Proteobacteria	Gammaproteobacteria	5.14471	64.9	-	JZVO01	71	4681	4347	5/18/15	4/3/17	Contig	Universidade de Sao Paulo	SAMN03379473	GCA_001009825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/825/GCA_001009825.1_ASM100982v1	26089818	GEV909
Aeromonas caviae	648	PRJNA320016	320016	Proteobacteria	Gammaproteobacteria	4.4987	61.3679	plasmid pIncQ2:CM004560.1; plasmid pKP3_A:CM004561.1	LXJO01	216	4099	3527	8/10/16	8/12/16	Contig	Christian Medical College	SAMN04914380	GCA_001702475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/702/475/GCA_001702475.1_ASM170247v1	-	VBF856
Streptobacillus moniliformis	34105	PRJNA319313	319313	Fusobacteria	Fusobacteriia	1.67897	26	-	LWTE01	256	1535	1414	6/4/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04892744	GCA_001657675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/675/GCA_001657675.1_ASM165767v1	-	ATCC 49940
Klebsiella aerogenes UCI 15	1400138	PRJNA219265	219265	Proteobacteria	Gammaproteobacteria	5.44381	55	-	JCKZ01	6	5386	5106	2/3/14	4/6/17	Scaffold	Broad Institute	SAMN02356595	GCA_000534335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/335/GCA_000534335.1_Ente_aero_UCI_15_V1	-	UCI 15
Leuconostoc pseudomesenteroides	33968	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.89805	39.1	-	MPBD01	87	1981	1764	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981492	GCA_002092355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/355/GCA_002092355.1_ASM209235v1	28217118	LMGTW3
Corynebacterium ulcerans	65058	PRJNA290982	290982	Terrabacteria group	Actinobacteria	2.42868	53.5	-	LGSY02	258	2286	1939	9/24/15	4/10/17	Contig	Federal University of Minas Gerais	SAMN03938368	GCA_001298285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/285/GCA_001298285.2_ASM129828v2	-	Mar-64
Aeromonas veronii	654	PRJNA296464	296464	Proteobacteria	Gammaproteobacteria	4.67855	58.6	-	LKJW01	64	4341	4122	11/19/15	4/4/17	Contig	Texas Tech University	SAMN04099657	GCA_001446645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/645/GCA_001446645.1_ASM144664v1	26824353	TTU2014-130AME
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.9879	64.1	-	FVCI01	28	4950	4803	3/10/17	3/18/17	Contig	SC	SAMEA2068671	GCA_900131095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/095/GCA_900131095.1_10665_3_55	-	225
Leptospira weilii	28184	PRJNA257145	257145	Spirochaetes	Spirochaetia	4.12361	40.8	-	JQSB01	277	4059	3731	2/24/16	4/5/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947891	GCA_001569525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/525/GCA_001569525.1_ASM156952v1	26833181	56655
Leptospira noguchii	28182	PRJNA291201	291201	Spirochaetes	Spirochaetia	4.76098	35.7	-	LHQT01	279	4336	3912	8/31/15	4/4/17	Scaffold	School of Veterinary Medicine and Animal Science / University of Sao Paulo	SAMN03943765	GCA_001276935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/935/GCA_001276935.1_ASM127693v1	26472831	U73
Gallibacterium anatis 10672-6	1396515	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.46984	39.8	-	JPHO01	93	2327	2186	11/5/14	4/2/17	Contig	University of Copenhagen	SAMN02344109	GCA_000772285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/285/GCA_000772285.1_ASM77228v1	-	10672-6
Mycobacterium colombiense	339268	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.55338	67.6	-	MBEN01	174	5255	5029	1/18/17	4/6/17	Contig	JCVI	SAMN04634275	GCA_001954055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/055/GCA_001954055.1_ASM195405v1	-	IS-1176
Mycobacterium africanum MAL010112	1354175	PRJNA211658	211658	Terrabacteria group	Actinobacteria	4.39643	65.5	-	JLAE01	3	4253	4039	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02231125	GCA_000666605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/605/GCA_000666605.1_Myco_afri_MAL010112_V1	-	MAL010112
Pantoea agglomerans	549	PRJEB9821	382651	Proteobacteria	Gammaproteobacteria	4.65938	55.1	-	FYAZ01	33	4381	4210	6/9/17	6/21/17	Contig	JUSTUS LIEBIG UNIVERSITY	SAMEA104113915	GCA_900185875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/875/GCA_900185875.1_Enterobacter_agglomerans_DSM3493T_ERS788664	-	-
Vibrio nigripulchritudo MADA3020	1238442	PRJEB555	317442	Proteobacteria	Gammaproteobacteria	6.28054	45.7	-	CANY01	140	5688	5598	10/8/13	3/18/17	Contig	Genoscope CEA	SAMEA3146275	GCA_900067765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/067/765/GCA_900067765.1_ASP_PRJEB555_v1	-	MADA3020
Burkholderia cepacia	292	PRJNA264338	264338	Proteobacteria	Betaproteobacteria	8.02334	66.9	-	JTDP01	5	7624	7311	2/18/15	4/3/17	Contig	Los Alamos National Laboratory	SAMN03144973	GCA_000877315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/315/GCA_000877315.1_BIG	25931592	LMG 16656
Enterococcus hirae	1354	PRJNA342049	342049	Terrabacteria group	Firmicutes	2.92187	36.7	-	MJDU01	47	2776	2557	4/3/17	4/5/17	Contig	Lethbridge Research Centre	SAMN05735018	GCA_002077385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/385/GCA_002077385.1_ASM207738v1	28270110	F0321D 238
Staphylococcus sciuri	1296	PRJNA412144	412144	Terrabacteria group	Firmicutes	2.86892	32.4	-	NXFX01	8	2876	2780	10/2/17	10/2/17	Scaffold	Aarhus University	SAMN07701646	GCA_002407445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/407/445/GCA_002407445.1_ASM240744v1	-	i1
Morganella morganii	582	PRJNA361484	361484	Proteobacteria	Gammaproteobacteria	4.1156	50.9	-	MZNC01	222	3968	3801	3/16/17	3/18/17	Contig	University of Sao Paulo	SAMN06562966	GCA_002029935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/935/GCA_002029935.1_ASM202993v1	-	ICBMmBL-II-04(2)
Streptococcus sobrinus TCI-89	1074064	PRJNA71897	71897	Terrabacteria group	Firmicutes	2.11548	43.4	-	AGGN01	322	2156	1903	10/6/11	3/30/17	Contig	JCVI	SAMN02436620	GCA_000228025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/025/GCA_000228025.2_SMUT1-NEX_21-89	-	TCI-89
Geobacillus sp. 1017	860353	PRJNA353982	353982	Terrabacteria group	Firmicutes	3.57495	51.8	-	MQMG01	186	3751	3378	12/19/16	4/17/17	Contig	"Institute of Bioengineering, Research Center of Biotechnology of RAS"	SAMN06043560	GCA_001908025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/025/GCA_001908025.1_ASM190802v1	-	1017
Actinomyces naeslundii	1655	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.12278	68	-	MSRP01	34	2674	2536	1/18/17	4/6/17	Scaffold	King's College London	SAMN05898703	GCA_001956515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/515/GCA_001956515.1_ASM195651v1	-	S43L
Mycobacterium chelonae	1774	PRJNA347845	347845	Terrabacteria group	Actinobacteria	4.88753	64.1	-	MLIL01	5	4802	4692	10/26/16	4/5/17	Contig	University of Georgia	SAMN05897993	GCA_001853845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/845/GCA_001853845.1_ASM185384v1	-	15510
Vibrio campbellii 200612B	1279999	PRJDB719	202996	Proteobacteria	Gammaproteobacteria	5.82897	45.4	-	BANY01	229	5426	5170	5/14/13	4/1/17	Contig	University of Miyazaki	SAMD00036652	GCA_000400205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/205/GCA_000400205.1_ASM40020v1	23710045	200612B
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28403	32.4	chromosome:AP017599.1	-	1	-	-	1/24/17	1/27/17	Chromosome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053852	GCA_002356755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/755/GCA_002356755.1_ASM235675v1	-	M99023
Leclercia adecarboxylata	83655	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.63911	55.6	-	DCFH01	31	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453203	GCA_002314395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/395/GCA_002314395.1_ASM231439v1	28894102	-
Campylobacter lanienae	75658	PRJNA341002	341002	Proteobacteria	delta/epsilon subdivisions	1.54385	34.6	-	MJJP01	73	1583	1511	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687022	GCA_002138535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/535/GCA_002138535.1_ASM213853v1	28854596	P147
Rhodococcus fascians LMG 3602	1443901	PRJNA233522	233522	Terrabacteria group	Actinobacteria	5.36405	64.6	-	JMEQ01	25	5113	4961	9/30/14	4/2/17	Scaffold	Oregon State University	SAMN02570000	GCA_000760995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/995/GCA_000760995.1_R_fas_LMG3602	-	LMG 3602
Nostoc sp. PCC 7107	317936	PRJNA158705	158705	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.32982	40.4	chromosome:NC_019676.1/CP003548.1	-	1	5456	5192	12/4/12	5/19/17	Complete Genome	JGI	SAMN02261332	GCA_000316625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/625/GCA_000316625.1_ASM31662v1	-	PCC 7107
Xanthomonas vasicola pv. vasculorum	325776	PRJNA374510	374510	Proteobacteria	Gammaproteobacteria	4.87775	63.2	-	MVYW01	129	4445	3965	6/13/17	6/15/17	Contig	Colorado State University	SAMN06324306	GCA_002191965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/965/GCA_002191965.1_ASM219196v1	-	NE744
Leptospira kirschneri str. MMD1493	1218583	PRJNA177151	177151	Spirochaetes	Spirochaetia	4.28916	35.9	-	ANII01	161	3891	3520	3/15/13	5/18/17	Contig	J. Craig Venter Institute	SAMN01801602	GCA_000347015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/015/GCA_000347015.1_gls454176v01	-	MMD1493
Salinispora pacifica DSM 45544	999543	PRJNA75077	75077	Terrabacteria group	Actinobacteria	5.46475	69.9	-	AQZG01	4	5016	4714	4/22/13	5/19/17	Scaffold	JGI	SAMN02261279	GCA_000378845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/845/GCA_000378845.1_ASM37884v1	-	DSM 45544
Xanthomonas arboricola	56448	PRJNA275693	275693	Proteobacteria	Gammaproteobacteria	4.93518	65.6	-	JZEH01	4	4320	4071	5/27/15	4/3/17	Scaffold	INRA	SAMN03352184	GCA_001013485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/013/485/GCA_001013485.1_ASM101348v1	-	CFBP 7634
Pseudomonas psychrotolerans	237610	PRJNA278438	278438	Proteobacteria	Gammaproteobacteria	5.34521	64.8	-	LDSW01	169	4820	4654	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401432	GCA_001477485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/485/GCA_001477485.1_ASM147748v1	26793183	SB14
Elizabethkingia anophelis PW2809	1450700	PRJEB5025	274238	FCB group	Bacteroidetes/Chlorobi group	3.92215	35.8	-	CBYE01	32	3617	3465	2/2/15	4/3/17	Scaffold	HKU	SAMEA3158491	GCA_001050935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/935/GCA_001050935.1_ASM105093v1	-	-
Rhizobium phaseoli Ch24-10	1128399	PRJNA79359	79359	Proteobacteria	Alphaproteobacteria	6.73257	61.3273	plasmid pRphCh2410a:NZ_CM003278.1/CM003278.1	AHJU02	28	6601	6215	6/15/12	4/3/17	Scaffold	"Centro de Ciencias Genomicas, UNAM"	SAMN02469452	GCA_000268285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/285/GCA_000268285.2_RPHCH2410v2	22858268	Ch24-10
Pseudoalteromonas luteoviolacea S4047-1	1365256	PRJNA213498	213498	Proteobacteria	Gammaproteobacteria	6.06116	41.6	-	AUXU01	180	5058	4867	4/22/16	4/5/17	Contig	Technical University of Denmark	SAMN02250940	GCA_001625715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/625/715/GCA_001625715.1_S4047-1_1.0	-	S4047-1
Cronobacter malonaticus	413503	PRJNA257997	257997	Proteobacteria	Gammaproteobacteria	4.5341	57	-	JPZH01	466	4511	4013	8/20/14	4/2/17	Scaffold	"Nottingham Trent University, UK"	SAMN02981580	GCA_000742405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/405/GCA_000742405.1_ASM74240v1	-	1569
Pseudomonas fragi	296	PRJNA397499	397499	Proteobacteria	Gammaproteobacteria	4.979	58.4	-	NQKO01	66	4638	4466	8/24/17	8/27/17	Scaffold	CSIRO Agriculture and Food	SAMN07459808	GCA_002269545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/545/GCA_002269545.1_ASM226954v1	-	F1815
Vibrio cyclitrophicus ZF14	1136166	PRJNA81877	81877	Proteobacteria	Gammaproteobacteria	5.22456	43.5	-	AIDH02	45	4631	4357	3/26/12	4/10/17	Scaffold	Massachusetts Institute of Technology	SAMN02470506	GCA_000256265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/265/GCA_000256265.2_ASM25626v2	22491847	ZF14
Enterococcus cecorum	44008	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.47802	37.1	-	NIBL01	10	2339	2111	6/6/17	6/8/17	Scaffold	Broad Institute	SAMN04634068	GCA_002174365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/365/GCA_002174365.1_ASM217436v1	-	2D5_DIV0622
Pseudomonas chlororaphis HT66	1343078	PRJNA207007	207007	Proteobacteria	Gammaproteobacteria	7.29862	62.6	-	ATBG01	50	6629	6404	3/19/14	4/2/17	Contig	Shanghai JiaoTong University	SAMN02951886	GCA_000597925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/925/GCA_000597925.1_ASM59792v1	-	HT66
Pasteurella multocida 36950	1075089	PRJNA70829	70829	Proteobacteria	Gammaproteobacteria	2.34952	40.4	chromosome:NC_016808.1/CP003022.1	-	1	2205	2064	11/9/11	3/30/17	Complete Genome	Goettingen Genomics Laboratory	SAMN02603284	GCA_000234745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/745/GCA_000234745.1_ASM23474v1	22001176	36950
Alcaligenes faecalis	511	PRJNA353361	353361	Proteobacteria	Betaproteobacteria	4.44137	56.9	-	MSZR01	58	4104	3991	5/9/17	5/22/17	Contig	New Jersey Medical School-Rutgers University	SAMN06200348	GCA_002120045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/045/GCA_002120045.1_ASM212004v1	-	GZAF5
Staphylococcus equorum	246432	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.92786	32.8	-	LNPY01	62	2858	2725	9/28/16	4/5/17	Scaffold	Tufts University	SAMN04244248	GCA_001747805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/805/GCA_001747805.1_ASM174780v1	-	908_10
Leadbetterella byssophila DSM 17132	649349	PRJNA38283	38283	FCB group	Bacteroidetes/Chlorobi group	4.05965	40.4	chromosome:NC_014655.1/CP002305.1	-	1	3634	3486	11/12/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00191237	GCA_000166395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/395/GCA_000166395.1_ASM16639v1	21475582	DSM 17132
Paeniclostridium sordellii	1505	PRJEB8132	277657	Terrabacteria group	Firmicutes	3.46763	27.3	-	CELI01	27	3353	3272	3/13/15	4/4/17	Contig	WTSI	SAMEA1572104	GCA_001372535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/535/GCA_001372535.1_W2945	-	W2945
Bordetella holmseii H620	1331251	PRJNA202194	202194	Proteobacteria	Betaproteobacteria	3.46404	62.8	-	JJNW01	409	3439	3069	4/29/14	4/2/17	Contig	JCVI	SAMN02231448	GCA_000649065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/065/GCA_000649065.1_gbb55v01	-	H620
Acinetobacter sp. CIP 102529	1144668	PRJNA183310	183310	Proteobacteria	Gammaproteobacteria	3.0272	41.7	-	APPB01	13	3023	2718	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01828170	GCA_000368325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/325/GCA_000368325.1_Acin_sp_CIP_102529_V1	-	CIP 102529
Bacillus safensis	561879	PRJNA392387	392387	Terrabacteria group	Firmicutes	3.75449	41.4905	plasmid pGR-8:NZ_CM008163.1/CM008163.1	NMQS01	17	3892	3746	8/14/17	8/30/17	Contig	Bundeswehr Muenchen	SAMN07298180	GCA_002250435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/435/GCA_002250435.1_ASM225043v1	-	Ingolstadt
Klebsiella sp. OBRC7	936565	PRJNA78567	78567	Proteobacteria	Gammaproteobacteria	6.34331	55	-	ALNJ01	158	6392	5975	8/27/12	5/18/17	Contig	J. Craig Venter Institute	SAMN00828785	GCA_000293135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/135/GCA_000293135.1_KspOBRC7v1.0	-	OBRC7
Flavobacterium sp. AED	1423323	PRJNA265075	265075	FCB group	Bacteroidetes/Chlorobi group	3.92515	33.6	-	JSYM01	15	3383	3304	12/31/14	4/10/17	Contig	GCAT-SEEK	SAMN03145165	GCA_000812945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/945/GCA_000812945.1_ASM81294v1	-	AED
Frankia sp. EUN1h	1834515	PRJNA318442	318442	Terrabacteria group	Actinobacteria	9.91095	71.8	-	MBLN01	129	8142	7707	10/26/16	4/13/17	Contig	"University of Tunis El Manar, Faculty of Sciences of Tunis"	SAMN04851311	GCA_001854645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/645/GCA_001854645.1_ASM185464v1	-	EUN1h
Acinetobacter sp. ADP1	62977	PRJNA12352	12352	Proteobacteria	Gammaproteobacteria	3.59862	40.4	chromosome:NC_005966.1/CR543861.1	-	1	3359	3229	6/30/04	4/6/17	Complete Genome	Genoscope	SAMEA3138250	GCA_000046845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/046/845/GCA_000046845.1_ASM4684v1	15514110	ADP1
Clostridium sp. 1_1_41A1FAA	457397	PRJNA39361	39361	Terrabacteria group	Firmicutes	3.03753	28.7	-	ACTE01	22	2834	2532	7/16/15	4/17/17	Scaffold	Broad Institute	SAMN00103339	GCA_001078415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/415/GCA_001078415.1_Clostridium_sp_1_1_41A1Faa_V1	-	1_1_41A1FAA
Sphingomonas sp. Leaf10	1735676	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.13571	65.8	-	LMKE01	34	3801	3649	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151579	GCA_001421245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/245/GCA_001421245.1_Leaf10	26633631	Leaf10
Pasteurella multocida subsp. multocida str. Pm70	272843	PRJNA39	39	Proteobacteria	Gammaproteobacteria	2.25749	40.4	chromosome:NC_002663.1/AE004439.1	-	1	2110	2021	10/24/00	3/29/17	Complete Genome	Univ. Minnesota	SAMN02604085	GCA_000006825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/006/825/GCA_000006825.1_ASM682v1	11248100	Pm70
Rhodococcus sp. UNC363MFTsu5.1	1449069	PRJNA234929	234929	Terrabacteria group	Actinobacteria	5.66788	69.3	-	JMLO01	69	5257	5079	5/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743364	GCA_000686785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/785/GCA_000686785.1_ASM68678v1	-	UNC363MFTsu5.1
Enterobacter sp. MGH 16	1329825	PRJNA201931	201931	Proteobacteria	Gammaproteobacteria	4.92657	55.8	-	AYJO01	2	4787	4579	10/30/13	4/20/17	Scaffold	Broad Institute	SAMN02138556	GCA_000493175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/175/GCA_000493175.1_Ente_cloa_complex_MGH_16_V1	-	MGH 16
Staphylococcus sp. HMSC06C11	1581122	PRJNA269891	269891	Terrabacteria group	Firmicutes	2.37393	32.8	-	LWND01	22	2242	2186	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03609717	GCA_001808345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/345/GCA_001808345.1_ASM180834v1	-	HMSC06C11
Corynebacterium sp. KPL1824	1203561	PRJNA169441	169441	Terrabacteria group	Actinobacteria	2.63898	59.2	-	AXLY01	2	2510	2324	10/21/13	4/17/17	Scaffold	Broad Institute	SAMN02597005	GCA_000478095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/095/GCA_000478095.1_Cory_sp_KPL1824_V1	-	KPL1824
Arthrobacter sp. 7749	2020130	PRJNA394013	394013	Terrabacteria group	Actinobacteria	4.12594	60.7	chromosome:CP022462.1	-	1	3718	3616	7/24/17	7/24/17	Chromosome	USP	SAMN07346923	GCA_002224445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/445/GCA_002224445.1_ASM222444v1	-	7749
Escherichia sp. TW10509	754332	PRJNA56135	56135	Proteobacteria	Gammaproteobacteria	5.19115	50.3	-	AEKA01	453	5416	5028	4/21/11	5/18/17	Contig	"Georgia Institute of Technology, School of Civil and Environmental Engineering"	SAMN02469840	GCA_000208545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/208/545/GCA_000208545.2_ASM20854v2	21482770	TW10509
Shewanella sp. UCD-FRSSP16_17	1853256	PRJNA322705	322705	Proteobacteria	Gammaproteobacteria	4.96018	40.7	-	LZFV01	50	4287	4123	6/23/16	4/13/17	Contig	UC Davis	SAMN05172614	GCA_001675935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/935/GCA_001675935.1_ASM167593v1	-	UCD-FRSSP16_17
Bradyrhizobium sp. th.b2	172088	PRJNA195826	195826	Proteobacteria	Alphaproteobacteria	10.1181	63.3	-	AUGA01	266	9677	8877	7/10/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441514	GCA_000426785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/785/GCA_000426785.1_ASM42678v1	-	th.b2
Streptococcus sp. F0441	999424	PRJNA64899	64899	Terrabacteria group	Firmicutes	2.00065	41.2	-	AGZY01	1	2025	1873	11/6/12	4/17/17	Scaffold	Broad Institute	SAMN02463945	GCA_000314775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/775/GCA_000314775.2_Strept_sp_F0441_V1	-	F0441
Mycobacterium sp. 155	1157943	PRJNA169802	169802	Terrabacteria group	Actinobacteria	4.60989	65.6	-	AREU01	2	4336	4168	4/19/13	5/18/17	Scaffold	DOE Joint Genome Institute	SAMN02441709	GCA_000373905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/905/GCA_000373905.1_ASM37390v1	-	155
Bifidobacterium sp. UBA4282	1946096	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.04771	64.3	-	DGVO01	59	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456461	GCA_002394995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/995/GCA_002394995.1_ASM239499v1	28894102	-
Serratia sp. H1w	1397285	PRJNA226210	226210	Proteobacteria	Gammaproteobacteria	6.12603	53.8	-	AYMQ01	240	5755	5446	4/18/14	4/9/17	Contig	University of Malaya	SAMN02729856	GCA_000633355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/355/GCA_000633355.1_de_novo	-	H1w
Polaromonas sp. 17-63-33	1970413	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	5.11581	62.5	-	NCIK01	53	5024	4881	8/16/17	8/16/17	Contig	None	SAMN06622244	GCA_002282035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/035/GCA_002282035.1_ASM228203v1	-	-
Sulfurovum sp. UBA1140	1947601	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.00734	35.9	-	DCAF01	80	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06457723	GCA_002311915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/915/GCA_002311915.1_ASM231191v1	28894102	-
Pantoea sp. MBLJ3	1562889	PRJNA264308	264308	Proteobacteria	Gammaproteobacteria	4.82132	54.2	-	JSUT01	37	4574	4402	1/8/15	4/10/17	Contig	FDA	SAMN03120826	GCA_000816655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/655/GCA_000816655.1_ASM81665v1	-	MBLJ3
Prevotella sp. HMSC069G02	1739496	PRJNA300146	300146	FCB group	Bacteroidetes/Chlorobi group	3.28076	43.8	-	LTUA01	199	2803	2559	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480413	GCA_001814855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/855/GCA_001814855.1_ASM181485v1	-	HMSC069G02
Enterococcus sp. HMSC055G03	1739313	PRJNA299963	299963	Terrabacteria group	Firmicutes	3.03561	37.6	-	LTFU01	295	3146	2959	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477625	GCA_001811575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/575/GCA_001811575.1_ASM181157v1	-	HMSC055G03
Lactobacillus sp. HMSC068F07	1739365	PRJNA300015	300015	Terrabacteria group	Firmicutes	2.99497	48	-	LTYG01	139	2860	2664	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480029	GCA_001812525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/525/GCA_001812525.1_ASM181252v1	-	HMSC068F07
Novosphingobium sp. CCH12-A3	1768752	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	5.44274	63.2	-	LSIA01	317	5252	4967	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299424	GCA_001556015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/015/GCA_001556015.1_ASM155601v1	-	CCH12-A3
Treponema sp. UBA793	1947760	PRJNA348753	348753	Spirochaetes	Spirochaetia	1.61187	39.7	-	DBIV01	130	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455916	GCA_002296705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/705/GCA_002296705.1_ASM229670v1	28894102	-
Citrobacter sp. MGH109	1686382	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.62331	51.3	-	LESR01	11	5625	5285	6/19/15	4/10/17	Scaffold	Broad Institute	SAMN03280167	GCA_001037505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/505/GCA_001037505.1_Citr_freu_complex_MGH109_V1	-	MGH109
Methylobacterium sp. Leaf99	1736251	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.64541	69.6	-	LMMU01	14	4355	4204	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151631	GCA_001422375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/375/GCA_001422375.1_Leaf99	26633631	Leaf99
Nocardioides sp. Root224	1736495	PRJNA297942	297942	Terrabacteria group	Actinobacteria	5.48787	71.4	-	LMIN01	15	5198	5081	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155764	GCA_001428725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/725/GCA_001428725.1_Root224	26633631	Root224
Epulopiscium sp. Nele67-Bin005	1764963	PRJNA294498	294498	Terrabacteria group	Firmicutes	2.09034	32.3	-	LNZR01	90	1820	1702	2/27/17	2/27/17	Scaffold	King Abdullah University of Science and Technology (KAUST)	SAMN04288927	GCA_002007365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/365/GCA_002007365.1_Nele67M	-	-
Erythrobacter sp. HI00D59	1822215	PRJNA305749	305749	Proteobacteria	Alphaproteobacteria	3.34736	63.4	-	LWEG01	121	3244	3118	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580754	GCA_001635465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/465/GCA_001635465.1_ASM163546v1	-	HI00D59
Sulfitobacter sp. TMED3	1986591	PRJNA385857	385857	Proteobacteria	Alphaproteobacteria	3.30122	60.3	-	NHBI01	72	3262	3133	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971857	GCA_002167505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/505/GCA_002167505.1_ASM216750v1	-	-
Polaribacter sp. ASP10-06a	1622228	PRJNA276743	276743	FCB group	Bacteroidetes/Chlorobi group	2.87844	34.8	-	LAQB01	165	-	-	4/28/15	4/28/15	Scaffold	Marine Biological Laboratory	SAMN03380218	GCA_000981635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/635/GCA_000981635.1_ASM98163v1	-	-
Marinobacter sp. EhN04	1849167	PRJNA321723	321723	Proteobacteria	Gammaproteobacteria	4.61902	57.2	-	LXYN01	38	4251	4147	5/24/16	4/12/17	Contig	University of Alberta	SAMN04965930	GCA_001650765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/765/GCA_001650765.1_ASM165076v1	-	EhN04
Acidovorax sp. Root217	1736492	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	6.75633	66.9	-	LMIH01	45	6216	6040	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155761	GCA_001428645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/645/GCA_001428645.1_Root217	26633631	Root217
Psychrobacter sp. DAB_AL32B	1028414	PRJNA385389	385389	Proteobacteria	Gammaproteobacteria	3.21153	41.9	-	NEXU01	218	2732	2550	7/24/17	7/28/17	Contig	"University of Warsaw, Faculty of Biology"	SAMN06888379	GCA_002224105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/105/GCA_002224105.1_ASM222410v1	-	DAB_AL32B
Caulobacter sp. UNC279MFTsu5.1	1502775	PRJEB17388	351582	Proteobacteria	Alphaproteobacteria	5.56979	68.7	-	FORN01	102	5135	4973	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02799626	GCA_900114015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/015/GCA_900114015.1_IMG-taxon_2590828858_annotated_assembly	-	UNC279MFTsu5.1
Janthinobacterium sp. HH103	1537275	PRJNA309038	309038	Proteobacteria	Betaproteobacteria	6.58466	62.5	-	LRIA01	141	5964	5758	10/11/16	4/13/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04320688	GCA_001758705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/705/GCA_001758705.1_ASM175870v1	27833590	HH103
Eubacterium sp. CAG:786	1262893	PRJEB1006	206821	Terrabacteria group	Firmicutes	2.67379	52.1	-	CAXS01	157	2535	2502	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138496	GCA_000432175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/175/GCA_000432175.1_MGS786	-	-
Alcanivorax sp. HI0007	1822218	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	3.6205	59.1	-	LWEJ01	286	3386	3207	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580757	GCA_001635525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/525/GCA_001635525.1_ASM163552v1	-	HI0007
Brevundimonas sp. SH203	345167	PRJDB5559	380099	Proteobacteria	Alphaproteobacteria	3.14554	67.6	-	BDMM01	16	3027	2947	3/11/17	5/31/17	Contig	"Utsunomiya University, Center for Bioscience Research and Education"	SAMD00075412	GCA_002157625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/625/GCA_002157625.1_Brevundimonas_SH203_assembly01	-	SH203
Pseudovibrio sp. JCM 19062	1481932	PRJDB1714	252077	Proteobacteria	Alphaproteobacteria	4.60703	52.3	-	BAXV01	286	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000393	GCA_001310715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/715/GCA_001310715.1_ASM131071v1	-	JCM 19062
Stenotrophomonas sp. YR347	1884374	PRJEB21434	391635	Proteobacteria	Gammaproteobacteria	4.68652	66	-	FZPB01	11	4293	4179	7/12/17	7/21/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05518671	GCA_900188015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/015/GCA_900188015.1_IMG-taxon_2693429819_annotated_assembly	-	YR347
Paenibacillus sp. Aloe-11	1050222	PRJNA68329	68329	Terrabacteria group	Firmicutes	5.81236	46.6	-	AGFI01	52	5262	4764	2/2/12	5/19/17	Scaffold	"College of Animal Science and Technology, Southwest University, China"	SAMN02471007	GCA_000245715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/715/GCA_000245715.1_ASM24571v1	22461553	Aloe-11
Ruminococcus sp. CAG:17	1262951	PRJEB738	206583	Terrabacteria group	Firmicutes	2.90882	44.6	-	CAZF01	155	2622	2593	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138510	GCA_000432455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/455/GCA_000432455.1_MGS17	-	-
Thioalkalivibrio sp. ALE9	1158169	PRJNA176949	176949	Proteobacteria	Gammaproteobacteria	2.9384	67.1	-	ARII01	24	2892	2749	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441000	GCA_000377445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/445/GCA_000377445.1_ASM37744v1	-	ALE9
Bacteroides sp. D22	585544	PRJNA41953	41953	FCB group	Bacteroidetes/Chlorobi group	6.34405	42	-	ADCK01	94	5268	4899	4/28/10	5/18/17	Scaffold	Broad Institute	SAMN02463819	GCA_000163675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/675/GCA_000163675.1_ASM16367v1	-	D22
Exiguobacterium sp. KKBO11	1805000	PRJNA312676	312676	Terrabacteria group	Firmicutes	3.17732	47.3	-	LUCU01	60	3260	3171	5/16/16	4/12/17	Contig	University of Houston	SAMN04505065	GCA_001644945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/945/GCA_001644945.1_KKBO11	-	KKBO11
Shigella sp. FC1567	1898037	PRJNA341903	341903	Proteobacteria	Gammaproteobacteria	4.53971	50.8	-	MIIV01	546	4932	4250	9/23/16	9/23/16	Scaffold	Christian Medical College	SAMN05730133	GCA_001743015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/743/015/GCA_001743015.1_ASM174301v1	-	FC1567
Prochlorococcus sp. HOT208_60m_813I02	1961091	PRJNA375759	375759	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.49834	31.4	-	MWOR01	281	1634	1445	3/14/17	3/16/17	Contig	Massachusetts Institute of Technology	SAMN06345451	GCA_002025865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/865/GCA_002025865.1_ASM202586v1	-	HOT208_60m_813I02
Desulfovibrio sp. Dsv1	1292024	PRJNA188736	188736	Proteobacteria	delta/epsilon subdivisions	2.60095	59.9	-	APFI01	360	-	-	5/31/13	7/29/15	Contig	Oak Ridge National Laboratory	SAMN02470750	GCA_000403945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/945/GCA_000403945.1_Dsv1	23555659	Dsv1
Actinomyces sp. oral taxon 877 str. F0543	1227264	PRJNA173934	173934	Terrabacteria group	Actinobacteria	2.71351	70.8	-	AWSG01	273	2416	2162	9/10/13	4/9/17	Scaffold	Washington University	SAMN02436890	GCA_000466305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/305/GCA_000466305.1_ASM46630v1	-	F0543
Parabacteroides sp. CAG:409	1262913	PRJEB870	206780	FCB group	Bacteroidetes/Chlorobi group	3.49524	42.2	-	CBJG01	189	2871	2823	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138709	GCA_000436495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/495/GCA_000436495.1_MGS409	-	-
Ralstonia sp. JGI 0001001-A05	1268314	PRJNA183548	183548	Proteobacteria	Betaproteobacteria	5.24581	63.7	-	AXYR01	76	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441424	GCA_000485415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/415/GCA_000485415.1_ASM48541v1	-	JGI 0001001-A05
Propionibacterium sp. HMSC067A02	1739399	PRJNA300049	300049	Terrabacteria group	Actinobacteria	2.48432	60	-	LWQI01	23	2508	2381	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480069	GCA_001813165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/165/GCA_001813165.1_ASM181316v1	-	HMSC067A02
Olsenella sp. KH3B4	1855394	PRJEB17033	351197	Terrabacteria group	Actinobacteria	2.37802	62.6	-	FOHD01	22	2091	2010	10/29/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216348	GCA_900111695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/695/GCA_900111695.1_IMG-taxon_2651870308_annotated_assembly	-	KH3B4
Alistipes sp. CAG:157	1262692	PRJEB729	206661	FCB group	Bacteroidetes/Chlorobi group	2.17615	56.7	-	CBAZ01	66	1869	1828	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138577	GCA_000433795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/795/GCA_000433795.1_MGS157	-	-
Campylobacter sp. RM9263	1895639	PRJNA341057	341057	Proteobacteria	delta/epsilon subdivisions	1.63262	32.3	-	MJLR01	59	1704	1635	5/15/17	9/19/17	Contig	USDA	SAMN05687077	GCA_002139815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/815/GCA_002139815.1_ASM213981v1	28854596	RM9263
Neisseria sp. HMSC072B12	1715080	PRJNA296208	296208	Proteobacteria	Betaproteobacteria	2.217	49.1	-	LTJW01	52	2174	2035	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477501	GCA_001809345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/345/GCA_001809345.1_ASM180934v1	-	HMSC072B12
Capnocytophaga sp. CM59	936370	PRJNA78587	78587	FCB group	Bacteroidetes/Chlorobi group	2.78506	41.3	-	ALNN01	75	2615	2485	8/27/12	4/17/17	Contig	J. Craig Venter Institute	SAMN00828795	GCA_000293175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/175/GCA_000293175.1_CspCM59v1.0	-	CM59
Collinsella sp. UBA1690	1946384	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.01352	59.9	-	DCJW01	21	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453407	GCA_002320125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/125/GCA_002320125.1_ASM232012v1	28894102	-
Afipia sp. 64-13	1895701	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	3.59953	63.6	-	MKUJ01	25	3358	3198	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660578	GCA_001897755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/755/GCA_001897755.1_ASM189775v1	-	-
Pseudonocardia sp. Ae263_Ps1	1885030	PRJNA336252	336252	Terrabacteria group	Actinobacteria	6.51244	73.6	-	MCIL01	14	6072	5652	1/4/17	4/17/17	Scaffold	University of East Anglia	SAMN05506989	GCA_001932355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/355/GCA_001932355.1_ASM193235v1	-	Ae263_Ps1
Methanosarcina sp. DTU009	1671627	PRJNA283298	283298	Euryarchaeota	Methanomicrobia	2.76833	41.4	-	LFRP01	47	-	-	1/12/16	3/10/16	Scaffold	Technical University of Denmark	SAMN03777413	GCA_001512365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/365/GCA_001512365.1_ASM151236v1	26839589	-
Selenomonas sp. CM52	936381	PRJNA78585	78585	Terrabacteria group	Firmicutes	2.58075	56.8	-	ALNM01	56	2447	2300	8/27/12	4/17/17	Contig	J. Craig Venter Institute	SAMN00828796	GCA_000292955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/955/GCA_000292955.1_SspCM52v1.0	-	CM52
Megasphaera sp. UBA4382	1946850	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.43709	49.5	-	DGRS01	88	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457224	GCA_002391155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/155/GCA_002391155.1_ASM239115v1	28894102	-
Sphingobacterium sp. UBA894	1947528	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	5.52219	39.8	-	DBEY01	46	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455067	GCA_002294605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/605/GCA_002294605.1_ASM229460v1	28894102	-
Thiomonas sp. 13-66-29	1970448	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	3.27883	66.1	-	NCKO01	220	3156	3046	8/16/17	8/16/17	Scaffold	None	SAMN06622188	GCA_002282785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/785/GCA_002282785.1_ASM228278v1	-	-
Rhodanobacter sp. C06	1945854	PRJNA369723	369723	Proteobacteria	Gammaproteobacteria	4.1374	67.9	-	MUNP01	82	3634	3545	2/16/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN06293018	GCA_002001105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/105/GCA_002001105.1_ASM200110v1	-	C06
Rothia sp. HMSC065B04	1739349	PRJNA299999	299999	Terrabacteria group	Actinobacteria	2.31934	59.4	-	LTEN01	14	1816	1727	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477657	GCA_001812285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/285/GCA_001812285.1_ASM181228v1	-	HMSC065B04
Sphingobium sp. AM	1176302	PRJNA305642	305642	Proteobacteria	Alphaproteobacteria	5.31883	64.5	-	LRUK01	112	5017	4802	2/5/16	4/11/17	Contig	CONICET-CINDEFI- La Plata	SAMN04364794	GCA_001550165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/550/165/GCA_001550165.1_ASM155016v1	27279417	AM
Halomonas sp. HAL1	550984	PRJNA73245	73245	Proteobacteria	Gammaproteobacteria	4.35132	54.1	-	AGIB01	102	4094	3913	10/11/11	5/18/17	Contig	"Soil, Water and Environmental Science, University of Arizona"	SAMN02471546	GCA_000235725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/725/GCA_000235725.2_ASM23572v1	22156396	HAL1
Candidatus Hamiltonella defensa (Bemisia tabaci)	672795	PRJNA312470	312470	Proteobacteria	Gammaproteobacteria	1.7395	40.3	chromosome:NZ_CP016303.1/CP016303.1	-	1	1671	1466	9/5/17	9/7/17	Complete Genome	Cornell University	SAMN05292319	GCA_002285855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/855/GCA_002285855.1_ASM228585v1	-	MEAM1
Atopobium sp. UBA4279	1946070	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.34511	59.7	-	DGVR01	137	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452405	GCA_002395035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/035/GCA_002395035.1_ASM239503v1	28894102	-
Sulfurimonas sp. UBA2011	1947587	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	1.59606	34.1	-	DDCH01	15	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451674	GCA_002335055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/055/GCA_002335055.1_ASM233505v1	28894102	-
Chryseobacterium sp. OV705	1500289	PRJNA247531	247531	FCB group	Bacteroidetes/Chlorobi group	5.20302	36.2	-	JUHD01	65	4675	4522	12/9/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02787071	GCA_000799645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/645/GCA_000799645.1_ASM79964v1	-	OV705
Cellulomonas sp. KH9	1855324	PRJEB17407	351611	Terrabacteria group	Actinobacteria	4.16813	74.6	-	FOSE01	11	3752	3620	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216467	GCA_900114185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/185/GCA_900114185.1_IMG-taxon_2654588203_annotated_assembly	-	KH9
Mesorhizobium sp. Root172	1736481	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	6.83888	63.1	-	LMHP01	25	6656	6430	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155750	GCA_001428205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/205/GCA_001428205.1_Root172	26633631	Root172
Variovorax sp. OK212	1882775	PRJEB17190	351308	Proteobacteria	Betaproteobacteria	8.80277	68	-	FOLP01	66	8096	7816	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444746	GCA_900112425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/425/GCA_900112425.1_IMG-taxon_2690315635_annotated_assembly	-	OK212
Vibrio crassostreae 9ZC88	1191304	PRJNA167008	167008	Proteobacteria	Gammaproteobacteria	4.84598	44.5	-	AJZB02	173	4290	4131	6/25/12	4/5/17	Scaffold	Broad Institute	SAMN02470487	GCA_000272205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/205/GCA_000272205.2_ASM27220v2	22955834	9ZC88
Xanthomonas translucens pv. graminis	134874	PRJEB10858	357903	Proteobacteria	Gammaproteobacteria	4.16169	68.8	-	FLTV01	311	3535	3259	12/16/16	4/6/17	Contig	CEBITEC	SAMEA4063033	GCA_900092415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/415/GCA_900092415.1_Xtg2	-	-
Snodgrassella alvi	1196083	PRJNA339423	339423	Proteobacteria	Betaproteobacteria	2.46352	41.3	-	NAHN01	79	2229	2135	4/13/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603569	GCA_002088635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/635/GCA_002088635.1_ASM208863v1	-	N-S3
Microbacterium sp. UNCCL10	1449058	PRJNA234875	234875	Terrabacteria group	Actinobacteria	3.11106	70.9	-	JQKT01	15	2978	2859	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02745433	GCA_000746195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/195/GCA_000746195.1_ASM74619v1	-	UNCCL10
Cupriavidus sp. D384	1538095	PRJDB3074	317446	Proteobacteria	Betaproteobacteria	6.83523	64.9	-	BBQI01	134	6181	6010	4/1/16	4/12/17	Contig	AIST	SAMD00019693	GCA_001652915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/915/GCA_001652915.1_ASM165291v1	-	D384
Hyphomonas sp. UBA1469	1946612	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.47265	58.4	-	DCSJ01	15	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454085	GCA_002325565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/565/GCA_002325565.1_ASM232556v1	28894102	-
Halorubrum sp. PL-Br10_E2g5	1727655	PRJNA286221	286221	Euryarchaeota	Halobacteria	1.48085	64.5	-	LKMU01	160	-	-	2/19/16	2/19/16	Contig	"Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam"	SAMN04124450	GCA_001564005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/005/GCA_001564005.1_ASM156400v1	-	-
Mycobacterium fortuitum	1766	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.22864	66.2	-	LZKM01	112	6013	5794	6/17/16	4/5/17	Contig	JCVI	SAMN04634205	GCA_001672855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/855/GCA_001672855.1_ASM167285v1	-	E2378
Aeromonas sp. RU34C	1907417	PRJEB18864	360721	Proteobacteria	Gammaproteobacteria	4.8125	61.2	-	FTNG01	23	4465	4266	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05880569	GCA_900156325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/325/GCA_900156325.1_IMG-taxon_2708742462_annotated_assembly	-	RU34C
Elizabethkingia meningoseptica	238	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	3.91142	36.4	-	MAHI01	16	3499	3431	3/8/17	3/11/17	Contig	CDC	SAMN05256543	GCA_002023585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/585/GCA_002023585.1_ASM202358v1	-	CSID_3000516977
Pluralibacter gergoviae	61647	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.92192	58.1	-	NGRU01	27	5665	5247	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521932	GCA_002151975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/975/GCA_002151975.1_ASM215197v1	-	MGH183
Blautia sp. CAG:37_48_57	1896976	PRJNA321218	321218	Terrabacteria group	Firmicutes	2.87141	48.2	-	MNRA01	101	2605	2432	12/23/16	12/23/16	Scaffold	None	SAMN05717232	GCA_001915695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/695/GCA_001915695.1_ASM191569v1	27819664	-
Gordonia sp. i37	1961707	PRJNA272922	272922	Terrabacteria group	Actinobacteria	6.22816	66.8	-	MVPX01	721	5783	5192	3/20/17	3/22/17	Contig	University of East Anglia	SAMN06349348	GCA_002043085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/085/GCA_002043085.1_ASM204308v1	-	i37
Massilia sp. PDC64	1881046	PRJEB15719	347657	Proteobacteria	Betaproteobacteria	7.51513	66.4	-	FMZS01	36	6583	6409	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05428966	GCA_900101265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/265/GCA_900101265.1_IMG-taxon_2684623005_annotated_assembly	-	PDC64
Pseudomonas protegens	380021	PRJNA299395	299395	Proteobacteria	Gammaproteobacteria	7.24764	62.1	chromosome:CP017964.1	-	1	6296	3407	11/10/16	11/10/16	Chromosome	Technical University Liberec	SAMN05964115	GCA_001874665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/665/GCA_001874665.1_ASM187466v1	-	UCT
Blastomonas sp. CCH4-D12	1768751	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	4.05159	64.3	-	LSHZ01	139	3939	3799	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299423	GCA_001555995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/995/GCA_001555995.1_ASM155599v1	-	CCH4-D12
Streptococcus oralis subsp. tigurinus	1077464	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.90566	41.2	-	NCUH01	11	1886	1785	4/18/17	4/21/17	Scaffold	Slagelse Hospital	SAMN06705627	GCA_002096415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/415/GCA_002096415.1_ASM209641v1	27325438	OD_311286_11
Raoultella ornithinolytica NBRC 105727 = ATCC 31898	1349784	PRJDB1369	231425	Proteobacteria	Gammaproteobacteria	5.53393	55.7	-	BCYR01	35	5317	5099	3/11/16	4/5/17	Contig	National Institute of Technology and Evaluation	SAMD00046738	GCA_001598295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/295/GCA_001598295.1_ASM159829v1	-	NBRC 105727
Brochothrix thermosphacta DSM 20171 = FSL F6-1036	1121126	PRJNA182539	182539	Terrabacteria group	Firmicutes	2.52912	36.3	-	AODI01	67	2655	2589	1/31/14	2/22/14	Contig	Cornell University	SAMN02641490	GCA_000525935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/935/GCA_000525935.1_BthermosphactaTYPE	-	FSL F6-1036
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.80871	58.8	-	LNWM01	65	4610	4473	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339850	GCA_001681475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/475/GCA_001681475.1_ASM168147v1	-	F3688
Curtobacterium sp. MCBA15_009	1898737	PRJNA342146	342146	Terrabacteria group	Actinobacteria	3.64995	71.8	-	MJGO01	41	3411	3303	11/2/16	4/13/17	Scaffold	Massachusetts Institute of Technology	SAMN05736486	GCA_001864895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/895/GCA_001864895.1_ASM186489v1	-	MCBA15_009
Streptomyces rimosus subsp. rimosus	132474	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.5906	71.9	-	JOBS01	129	8440	8034	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645399	GCA_000720605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/605/GCA_000720605.1_ASM72060v1	-	NRRL WC-3558
Butyrivibrio sp. LB2008	1408305	PRJNA223048	223048	Terrabacteria group	Firmicutes	3.71884	40.6	-	JHXZ01	30	3466	3339	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743998	GCA_000621565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/565/GCA_000621565.1_ASM62156v1	-	LB2008
Ensifer sp. LC14	1873714	PRJNA328912	328912	Proteobacteria	Alphaproteobacteria	6.22518	62.2	-	MBSQ01	74	5861	5666	7/28/16	4/13/17	Contig	Monash University Malaysia	SAMN05384000	GCA_001695785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/785/GCA_001695785.1_ASM169578v1	-	LC14
Leifsonia sp. Root1293	1736446	PRJNA297942	297942	Terrabacteria group	Actinobacteria	3.61129	68.3	-	LMEH01	2	3386	3302	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04155715	GCA_001425325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/325/GCA_001425325.1_Root1293	26633631	Root1293
Sphingopyxis sp. H077	1759068	PRJNA294421	294421	Proteobacteria	Alphaproteobacteria	5.25661	64.6	-	LNRV01	66	4986	4816	12/15/15	4/11/17	Contig	US EPA	SAMN04252881	GCA_001467445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/445/GCA_001467445.1_ASM146744v1	-	H077
Pseudomonas denitrificans (nomen rejiciendum)	43306	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.9902	66.5	-	JURS01	396	5846	5423	7/10/15	5/25/17	Scaffold	University of Washington	SAMN03198030	GCA_001066435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/435/GCA_001066435.1_ASM106643v1	26230489	816_PDEN
Helicobacter sp. 12S02634-8	1476199	PRJNA344861	344861	Proteobacteria	delta/epsilon subdivisions	1.88966	41.4	-	MLAP01	61	1850	1765	8/28/17	8/30/17	Scaffold	Utrecht University	SAMN05851382	GCA_002272865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/865/GCA_002272865.1_ASM227286v1	28827684	12S02634-8
Faecalibacterium sp. UBA1771	1946506	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.35018	48.1	-	DCGT01	49	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456555	GCA_002315315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/315/GCA_002315315.1_ASM231531v1	28894102	-
Roseburia sp. CAG:197_41_10	1897018	PRJNA321218	321218	Terrabacteria group	Firmicutes	2.31442	41.4	-	MNTI01	136	2282	1880	12/23/16	12/23/16	Scaffold	None	SAMN05717292	GCA_001916895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/895/GCA_001916895.1_ASM191689v1	27819664	-
Salinivibrio sp. IB870	1766121	PRJNA368704	368704	Proteobacteria	Gammaproteobacteria	3.43786	50.5	-	MUEX01	42	3159	3031	2/14/17	2/22/17	Contig	Universidad de Sevilla	SAMN06270272	GCA_001995945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/945/GCA_001995945.1_ASM199594v1	-	IB870
Pasteurella multocida subsp. multocida str. HN07	1436299	PRJNA231703	231703	Proteobacteria	Gammaproteobacteria	2.32503	40.3	chromosome:NZ_CP007040.1/CP007040.1	-	1	2195	2098	1/18/17	4/6/17	Complete Genome	Huazhong Agriculture University	SAMN06238074	GCA_001956795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/795/GCA_001956795.1_ASM195679v1	-	HN07
Pasteurella multocida	747	PRJNA360234	360234	Proteobacteria	Gammaproteobacteria	2.28904	40.3	chromosome:CP019081.1	-	1	2158	1903	1/18/17	1/18/17	Complete Genome	Friedrich-Loeffler-Institut	SAMN06205305	GCA_001956675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/675/GCA_001956675.1_ASM195667v1	-	Razi 0002
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.85751	35.4	-	LZHN01	93	2825	2627	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179614	GCA_001690435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/435/GCA_001690435.1_ASM169043v1	-	Nev3-1
Lysinibacillus sp. TC-37	1500275	PRJEB16256	348880	Terrabacteria group	Firmicutes	4.58756	37.7	-	FMXU01	38	4482	4246	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02787079	GCA_900104325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/325/GCA_900104325.1_IMG-taxon_2585428100_annotated_assembly	-	TC-37
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.08218	41.6	-	FTQE01	1	967	904	3/18/17	3/24/17	Contig	Functional Genomics Genter Zurich	SAMEA4555921	GCA_900149505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/505/GCA_900149505.1_9-1b	-	-
Lactobacillus kunkeei	148814	PRJNA270973	270973	Terrabacteria group	Firmicutes	1.56008	37.1	-	JXDF01	31	1462	1386	10/8/15	4/4/17	Contig	Uppsala university	SAMN03277051	GCA_001308195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/308/195/GCA_001308195.1_ASM130819v1	25953738	LMbo
Devosia sp. SCN 66-27	1660097	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	5.33159	65.7	-	MEDU01	254	5284	5028	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652440	GCA_001724185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/185/GCA_001724185.1_ASM172418v1	26031303	-
Bosea sp. Root670	1736583	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	5.36541	66.3	-	LMJU01	21	5162	5026	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155852	GCA_001429415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/415/GCA_001429415.1_Root670	26633631	Root670
Vibrio metoecus	1481663	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.98606	46.9	-	NMSR01	80	3791	3617	8/31/17	9/2/17	Scaffold	University of Alberta	SAMN07350491	GCA_002283965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/965/GCA_002283965.1_ASM228396v1	-	OYP5H08
Klebsiella michiganensis	1134687	PRJNA248712	248712	Proteobacteria	Gammaproteobacteria	6.07324	55.9	-	JNFT01	5	5861	5569	7/25/14	2/21/17	Contig	China National Rice Research Institute	SAMN02800923	GCA_000733495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/495/GCA_000733495.1_ASM73349v1	-	SA2
Achromobacter sp. HZ28	2015171	PRJNA391527	391527	Proteobacteria	Betaproteobacteria	7.04794	64.8	-	NJIY01	24	6138	5985	6/27/17	6/29/17	Contig	Northwest A&F University	SAMN07270269	GCA_002209495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/495/GCA_002209495.1_ASM220949v1	-	HZ28
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	7.04101	43.9	-	MPTH01	114	6237	6081	1/18/17	4/6/17	Contig	Cornell University	SAMN05772534	GCA_001954575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/575/GCA_001954575.1_ASM195457v1	-	FSL H8-0147
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.54909	50.8	-	MPRP01	68	2501	2417	3/6/17	3/9/17	Contig	Harvard University	SAMN06016287	GCA_002020935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/935/GCA_002020935.1_ASM202093v1	-	-
Enterobacter ludwigii	299767	PRJEB8254	278830	Proteobacteria	Gammaproteobacteria	5.28592	54.6	-	CEFR01	91	4922	4681	3/20/15	4/5/17	Scaffold	FONDAZIONE EDMUND MACH	SAMEA3213012	GCA_900068855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/068/855/GCA_900068855.1_LecVs2.fasta	-	LecVs2
Mycobacterium immunogenum	83262	PRJNA299467	299467	Terrabacteria group	Actinobacteria	5.54622	64.3	-	LQPA01	35	5510	5351	4/20/17	4/22/17	Contig	University of Trento	SAMN04216931	GCA_002101665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/665/GCA_002101665.1_ASM210166v1	-	ATCC 700505
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.83184	32.4	-	FQKD01	20	2854	2675	11/23/16	4/5/17	Contig	SC	SAMEA3449071	GCA_900126525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/525/GCA_900126525.1_17175_3_15	-	3688STDY6125063
Klebsiella quasipneumoniae subsp. quasipneumoniae	1667327	PRJNA288524	288524	Proteobacteria	Gammaproteobacteria	5.33554	58	-	LGAL01	84	5292	4934	8/4/15	2/21/17	Contig	University of Siena	SAMN03801514	GCA_001208885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/885/GCA_001208885.1_EST_A5miseq	26383657	FI_HV_2014
Lactobacillus acetotolerans	1600	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.26428	36.1	-	DHEW01	132	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452753	GCA_002400095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/095/GCA_002400095.1_ASM240009v1	28894102	-
Mycobacterium chimaera	222805	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.76558	67.8	-	NSFK01	27	5441	5256	9/12/17	9/14/17	Contig	University of Michigan Medical School	SAMN07528779	GCA_002292625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/625/GCA_002292625.1_ASM229262v1	-	FLAC0067
Lactobacillus parabuchneri	152331	PRJNA357007	357007	Terrabacteria group	Firmicutes	2.70816	43.3	-	MSBA01	60	2631	2477	4/18/17	4/21/17	Scaffold	University of Bern	SAMN06130981	GCA_002095725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/725/GCA_002095725.1_ASM209572v1	28261177	FAM23166
Lactobacillus taiwanensis	508451	PRJNA384810	384810	Terrabacteria group	Firmicutes	1.96847	34.1	-	NGOM01	48	1951	1742	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848418	GCA_002253385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/385/GCA_002253385.1_ASM225338v1	-	111z
Lactobacillus aviarius	1606	PRJNA316009	316009	Terrabacteria group	Firmicutes	1.6293	40.2	-	LWUG01	61	1574	1476	6/2/16	4/5/17	Scaffold	University of Minnesota	SAMN04573034	GCA_001654675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/654/675/GCA_001654675.1_ASM165467v1	-	UMNLAv14
Nitrospira sp. UBA2083	1946987	PRJNA348753	348753	Nitrospirae	Nitrospira	4.44296	54.7	-	DCZN01	137	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457482	GCA_002331625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/625/GCA_002331625.1_ASM233162v1	28894102	-
Enterobacter kobei	208224	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.41417	54.4	-	LJED02	212	5450	5084	10/15/15	4/5/17	Contig	University of KwaZulu Natal	SAMN04011437	GCA_001316705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/705/GCA_001316705.2_ASM131670v2	-	ST54:941713674
Alteromonas mediterranea U4	1300255	PRJNA192190	192190	Proteobacteria	Gammaproteobacteria	4.62458	44.6705	chromosome:CP004849.1; plasmid unnamed:CP004850.1	-	2	4160	4084	7/8/13	9/6/17	Chromosome	University Miguel Hernandez	SAMN02604123	GCA_000439515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/515/GCA_000439515.1_ASM43951v1	-	Ionian Sea U4
Enterobacter xiangfangensis	1296536	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.27441	54.7	-	NFFB01	92	5295	5025	6/8/17	6/10/17	Contig	JCVI	SAMN06812647	GCA_002177145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/145/GCA_002177145.1_ASM217714v1	-	ARLG-2824
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.81814	66.7	-	LOZX01	70	6295	6037	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449333	GCA_001527765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/765/GCA_001527765.1_ASM152776v1	-	MSMB1499
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.55951	67.7	-	LOZZ01	73	6842	6533	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449335	GCA_001527805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/805/GCA_001527805.1_ASM152780v1	-	MSMB1968
Syntrophomonas sp. UBA1041	1947614	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.66488	48.9	-	DCEA01	121	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452059	GCA_002316705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/705/GCA_002316705.1_ASM231670v1	28894102	-
Proteiniphilum sp. EBM-39	1918497	PRJNA315143	315143	FCB group	Bacteroidetes/Chlorobi group	2.13856	41.3	-	MPOV01	191	-	-	12/9/16	12/9/16	Contig	UC Berkeley	SAMN06018871	GCA_001896575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/575/GCA_001896575.1_ASM189657v1	-	-
Candidatus Kryptonium thompsoni	1633631	PRJEB11718	301867	FCB group	Candidatus Kryptonia	1.56675	37.3	-	CZVO01	138	1560	1528	11/11/15	1/13/16	Scaffold	DOE - Joint Genome Institute	SAMN03435928	GCA_001536185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/185/GCA_001536185.1_JGI_assembly	-	JGI-10
Enterobacter cloacae complex 'Hoffmann cluster IV'	1812935	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.03132	55.8	-	NEYZ01	101	4965	4714	6/9/17	6/12/17	Contig	JCVI	SAMN06812620	GCA_002184675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/675/GCA_002184675.1_ASM218467v1	-	ARLG-2968
Polynucleobacter sp. 35-46-11	1970425	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	3.48752	45.9	-	NCFJ01	768	3852	3700	8/16/17	8/16/17	Scaffold	None	SAMN06622323	GCA_002281105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/105/GCA_002281105.1_ASM228110v1	-	-
Oleiphilus sp. HI0073	1822248	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	6.10324	47.5	-	LWFN01	2628	5519	4664	5/2/16	5/2/16	Contig	Massachusetts Institute of Technology	SAMN04580787	GCA_001634985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/985/GCA_001634985.1_ASM163498v1	-	HI0073
Lachnoclostridium sp. UBA1308	1946684	PRJNA348753	348753	Terrabacteria group	Firmicutes	4.82027	38.5	-	DBTU01	60	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06453953	GCA_002307215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/215/GCA_002307215.1_ASM230721v1	28894102	-
Gilliamella sp. NO4	1970464	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.51943	34.7	-	NASM01	214	2297	2186	5/16/17	5/24/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603537	GCA_002142165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/165/GCA_002142165.1_ASM214216v1	-	NO4
uncultured Lachnospira sp.	446043	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.8231	41.3	-	FMGY01	82	3311	3251	8/16/16	8/16/16	Scaffold	SC	SAMEA3545430	GCA_900066985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/985/GCA_900066985.1_14207_7_90	-	-
uncultured Flavonifractor sp.	1193534	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.07108	55.8	-	FMGL01	29	3126	3075	8/16/16	8/16/16	Scaffold	SC	SAMEA3545400	GCA_900066875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/875/GCA_900066875.1_14207_7_60	-	-
Thiobacillus sp. UBA1540	1947684	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	2.12047	61.6	-	DCPQ01	117	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455905	GCA_002323175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/175/GCA_002323175.1_ASM232317v1	28894102	-
Bradyrhizobium canariense	255045	PRJNA355582	355582	Proteobacteria	Alphaproteobacteria	8.27956	63	-	NAFD01	195	7841	7362	4/24/17	8/7/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN06077201	GCA_002108995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/995/GCA_002108995.1_ASM210899v1	28729275	UBMA171
Fibrobacter sp. UWB12	1896203	PRJEB18358	355816	FCB group	Fibrobacteres	3.82634	46.8	-	FRAZ01	21	3102	2974	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05720759	GCA_900142485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/485/GCA_900142485.1_IMG-taxon_2700988683_annotated_assembly	-	UWB12
Archaeoglobus sp. JdFR-27	1934984	PRJNA269163	269163	Euryarchaeota	Archaeoglobi	2.36004	40.5	-	MTMO01	67	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226344	GCA_002011235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/235/GCA_002011235.1_ASM201123v1	28350381	-
Xanthomonas axonopodis pv. manihotis str. CIO1	1185659	PRJNA163713	163713	Proteobacteria	Gammaproteobacteria	4.8989	65.1	-	AKCZ01	128	4352	4019	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090304	GCA_000265825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/825/GCA_000265825.1_CIO1	22699502	CIO1
Catabacter sp. UBA1242	1946239	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.19671	31	-	DBWI01	41	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06455238	GCA_002308915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/915/GCA_002308915.1_ASM230891v1	28894102	-
Candidatus Microthrix sp. UBA1677	1946162	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.9803	63.1	-	DCKJ01	192	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454219	GCA_002320305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/305/GCA_002320305.1_ASM232030v1	28894102	-
Kandleria sp. UBA4251	1946668	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.39177	37.1	-	DGWT01	70	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451180	GCA_002395325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/325/GCA_002395325.1_ASM239532v1	28894102	-
Mageeibacillus sp. UBA4941	1946790	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.79594	46.2	-	DHAZ01	107	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450420	GCA_002398775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/775/GCA_002398775.1_ASM239877v1	28894102	-
Chthonomonas sp. UBA2785	1946339	PRJNA348753	348753	Terrabacteria group	Armatimonadetes	2.49335	62.3	-	DEIB01	56	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06457878	GCA_002352215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/215/GCA_002352215.1_ASM235221v1	28894102	-
Kandleria sp. UBA4229	1946667	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.39433	39.8	-	DGXP01	234	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455670	GCA_002396365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/365/GCA_002396365.1_ASM239636v1	28894102	-
Candidatus Microthrix sp. UBA1676	1946161	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.68228	43.8	-	DCKK01	151	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454220	GCA_002320315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/315/GCA_002320315.1_ASM232031v1	28894102	-
Catabacter sp. UBA1224	1946238	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.94129	53.7	-	DBXA01	194	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06455341	GCA_002309235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/235/GCA_002309235.1_ASM230923v1	28894102	-
Xanthomonas axonopodis pv. manihotis str. CIO151	1185660	PRJNA163715	163715	Proteobacteria	Gammaproteobacteria	4.91125	65.1	-	AKDA01	175	4371	4018	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090305	GCA_000265845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/845/GCA_000265845.1_CIO151	22699502	CIO151
Archaeoglobus sp. JdFR-28	1934985	PRJNA269163	269163	Euryarchaeota	Archaeoglobi	0.752164	40.4	-	MTMP01	14	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226345	GCA_002011245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/245/GCA_002011245.1_ASM201124v1	28350381	-
Fibrobacter sp. UWOV1	1896215	PRJEB18359	355817	FCB group	Fibrobacteres	3.68705	50.3	-	FRBA01	29	3093	2963	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05720470	GCA_900142495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/495/GCA_900142495.1_IMG-taxon_2700988684_annotated_assembly	-	UWOV1
Thiobacillus sp. UBA2186	1947685	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	2.51397	62.6	-	DCVO01	189	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452568	GCA_002327405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/405/GCA_002327405.1_ASM232740v1	28894102	-
uncultured Flavonifractor sp.	1193534	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.41815	59.7	-	FMGO01	69	3283	3235	8/16/16	8/16/16	Scaffold	SC	SAMEA3545403	GCA_900066895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/895/GCA_900066895.1_14207_7_63	-	-
Gilliamella sp. N-G1	1970470	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.47881	34.7	-	NASS01	65	2238	2146	5/16/17	5/24/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603543	GCA_002142185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/185/GCA_002142185.1_ASM214218v1	-	N-G1
Lachnoclostridium sp. UBA1241	1946683	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.18179	51.8	-	DBWJ01	113	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06455237	GCA_002308955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/955/GCA_002308955.1_ASM230895v1	28894102	-
Oleiphilus sp. HI0078	1822253	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	4.43183	44.3	-	LWFS01	2530	4218	3209	5/2/16	5/2/16	Contig	Massachusetts Institute of Technology	SAMN04580792	GCA_001635075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/075/GCA_001635075.1_ASM163507v1	-	HI0078
Polynucleobacter sp. 35-46-207	1970426	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	2.22869	45.2	-	NCFV01	1103	2837	2502	8/16/17	8/16/17	Scaffold	None	SAMN06622311	GCA_002281335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/335/GCA_002281335.1_ASM228133v1	-	-
Enterobacter cloacae complex 'Hoffmann cluster IV'	1812935	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.77213	55.6	-	JWGU01	266	4644	4418	7/10/15	4/20/17	Scaffold	University of Washington	SAMN03196962	GCA_001052055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/055/GCA_001052055.1_ASM105205v1	26230489	1000_ECLO
Candidatus Kryptonium thompsoni	1633631	PRJEB11724	301873	FCB group	Candidatus Kryptonia	0.842126	37.3	-	CZVT01	197	977	956	11/11/15	1/13/16	Scaffold	DOE - Joint Genome Institute	SAMN03436093	GCA_001536165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/165/GCA_001536165.1_JGI_assembly	-	JGI-17
Proteiniphilum sp. EBM-41	1918498	PRJNA315143	315143	FCB group	Bacteroidetes/Chlorobi group	2.86204	37.2	-	MPOX01	47	-	-	12/9/16	12/9/16	Contig	UC Berkeley	SAMN06018902	GCA_001896655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/655/GCA_001896655.1_ASM189665v1	-	-
Syntrophomonas sp. UBA1034	1947613	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.9419	47.1	-	DCEH01	114	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456018	GCA_002316855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/855/GCA_002316855.1_ASM231685v1	28894102	-
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.619	67.6	-	LPAC01	94	6933	6583	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449338	GCA_001527825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/825/GCA_001527825.1_ASM152782v1	-	MSMB1570WGS
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.96646	66.6	-	LPBU01	73	6432	6138	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449383	GCA_001528005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/005/GCA_001528005.1_ASM152800v1	-	MSMB1919WGS
Enterobacter xiangfangensis	1296536	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.00039	55.1	-	NEYT01	51	4985	4740	6/9/17	6/12/17	Contig	JCVI	SAMN06812614	GCA_002184665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/665/GCA_002184665.1_ASM218466v1	-	ARLG-2974
Enterobacter kobei	208224	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.36896	54.4	-	LJEW02	172	5350	4995	10/15/15	4/5/17	Contig	University of KwaZulu Natal	SAMN04011456	GCA_001317225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/225/GCA_001317225.2_ASM131722v2	-	ST434:953099839
Nitrospira sp. UBA4129	1946988	PRJNA348753	348753	Nitrospirae	Nitrospira	3.38837	59	-	DFWR01	376	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453221	GCA_002380995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/995/GCA_002380995.1_ASM238099v1	28894102	-
Lactobacillus taiwanensis	508451	PRJNA384810	384810	Terrabacteria group	Firmicutes	1.99288	34.3	-	NGOP01	89	1950	1743	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848415	GCA_002253395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/395/GCA_002253395.1_ASM225339v1	-	111o
Lactobacillus parabuchneri	152331	PRJNA357007	357007	Terrabacteria group	Firmicutes	2.61394	43.3	-	MSBI01	54	2513	2368	4/18/17	4/21/17	Scaffold	University of Bern	SAMN06130989	GCA_002095765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/765/GCA_002095765.1_ASM209576v1	28261177	FAM23282
Mycobacterium chimaera	222805	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.8296	67.8	-	NSFL01	30	5498	5310	9/12/17	9/14/17	Contig	University of Michigan Medical School	SAMN07528778	GCA_002292645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/645/GCA_002292645.1_ASM229264v1	-	FLAC0063
Lactobacillus acetotolerans	1600	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.23779	34.7	-	DHFH01	126	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453061	GCA_002400285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/285/GCA_002400285.1_ASM240028v1	28894102	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJNA315310	315310	Proteobacteria	Gammaproteobacteria	5.59771	57.6	-	LVCD01	96	5561	5310	4/5/16	2/21/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04555532	GCA_001611185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/185/GCA_001611185.1_ASM161118v1	27231362	KP-Z4175
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79781	32.3	-	FQML01	14	2800	2623	11/24/16	4/5/17	Contig	SC	SAMEA3449073	GCA_900126545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/545/GCA_900126545.1_17175_3_17	-	3688STDY6125065
Mycobacterium immunogenum	83262	PRJNA273764	273764	Terrabacteria group	Actinobacteria	5.56672	64.3	-	JXUU01	102	5542	5366	2/20/15	4/3/17	Scaffold	UCSF	SAMN03295724	GCA_000878425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/425/GCA_000878425.1_ASM87842v1	25926490	SMUC14
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.41307	50.9	-	MPRC01	63	2376	2278	3/6/17	3/9/17	Contig	Harvard University	SAMN06016276	GCA_002020955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/955/GCA_002020955.1_ASM202095v1	-	-
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	6.84379	44.2	-	MPTM01	89	6000	5866	1/18/17	4/6/17	Contig	Cornell University	SAMN05772528	GCA_001954585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/585/GCA_001954585.1_ASM195458v1	-	FSL H7-0713
Achromobacter sp. RTa	1532557	PRJNA257545	257545	Proteobacteria	Betaproteobacteria	6.47649	66.6	-	JPYO01	48	5957	5827	9/23/14	4/9/17	Scaffold	Oklahoma State University	SAMN02953212	GCA_000757485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/485/GCA_000757485.1_ACRTA	-	RTa
Klebsiella michiganensis	1134687	PRJNA248329	248329	Proteobacteria	Gammaproteobacteria	6.30037	55.5	-	JNCH01	97	6095	5823	7/28/14	2/21/17	Contig	University of Malaya	SAMN02797823	GCA_000735215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/215/GCA_000735215.1_ASM73521v1	-	R8A
Vibrio metoecus	1481663	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.90354	47	-	NMSS01	300	3802	3431	8/31/17	9/2/17	Scaffold	University of Alberta	SAMN07350490	GCA_002283995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/995/GCA_002283995.1_ASM228399v1	-	OYP5D09
Bosea sp. OK403	1855286	PRJEB17371	351540	Proteobacteria	Alphaproteobacteria	6.63913	65.3	-	FOQV01	24	6102	5951	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216304	GCA_900113835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/835/GCA_900113835.1_IMG-taxon_2609459641_annotated_assembly	-	OK403
Devosia sp. 63-57	1895751	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	3.99445	62.7	-	MKUY01	8	3845	3772	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660593	GCA_001899045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/045/GCA_001899045.1_ASM189904v1	-	-
Lactobacillus kunkeei	148814	PRJNA270963	270963	Terrabacteria group	Firmicutes	1.40692	36.6	-	JXDC01	9	1340	1265	10/8/15	4/4/17	Contig	Uppsala university	SAMN03277032	GCA_001308205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/308/205/GCA_001308205.1_ASM130820v1	25953738	LAdo
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.09202	42.1	-	FTQO01	3	971	906	3/18/17	3/24/17	Contig	Functional Genomics Genter Zurich	SAMEA4555924	GCA_900149515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/515/GCA_900149515.1_3-25a	-	-
Lysinibacillus sp. SG45	1500271	PRJEB16915	351050	Terrabacteria group	Firmicutes	4.7733	37.3	-	FOCR01	43	4753	4517	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02787103	GCA_900110175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/175/GCA_900110175.1_IMG-taxon_2585428099_annotated_assembly	-	SG45
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.501	35.2	-	LZGP01	38	2300	2216	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179582	GCA_001690445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/445/GCA_001690445.1_ASM169044v1	-	wkB195
Pasteurella multocida	747	PRJNA312874	312874	Proteobacteria	Gammaproteobacteria	2.41556	40.3	chromosome:NZ_CP014618.1/CP014618.1	-	1	2339	2202	9/8/16	4/5/17	Complete Genome	Jilin Agricultural University	SAMN04520874	GCA_001721885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/885/GCA_001721885.1_ASM172188v1	-	Pm-3
Salinivibrio sp. PR6	1909485	PRJNA368792	368792	Proteobacteria	Gammaproteobacteria	3.44392	50.4	-	MUFA01	49	3196	3045	2/14/17	2/22/17	Contig	Universidad de Sevilla	SAMN06272985	GCA_001995955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/955/GCA_001995955.1_ASM199595v1	-	PR6
Pseudobutyrivibrio sp. UBA3836	1947300	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.46129	36.3	-	DGHY01	38	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451316	GCA_002392865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/865/GCA_002392865.1_ASM239286v1	28894102	-
Roseburia sp. CAG:10041_57	1897016	PRJNA321218	321218	Terrabacteria group	Firmicutes	3.45344	41.3	-	MNTL01	87	3152	2977	12/23/16	12/23/16	Scaffold	None	SAMN05717295	GCA_001916965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/965/GCA_001916965.1_ASM191696v1	27819664	-
Faecalibacterium sp. UBA1697	1946504	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.12007	58.5	-	DCJP01	69	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453408	GCA_002320085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/085/GCA_002320085.1_ASM232008v1	28894102	-
Helicobacter sp. 12S02232-10	1476197	PRJNA344861	344861	Proteobacteria	delta/epsilon subdivisions	1.89979	35	-	MLAQ01	54	1892	1821	8/28/17	8/30/17	Scaffold	Utrecht University	SAMN05851385	GCA_002272895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/895/GCA_002272895.1_ASM227289v1	28827684	12S02232-10
Pseudomonas denitrificans (nomen rejiciendum)	43306	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.98257	66.5	-	JURR01	412	5891	5404	7/10/15	5/30/17	Scaffold	University of Washington	SAMN03198031	GCA_001066465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/465/GCA_001066465.1_ASM106646v1	26230489	817_PDEN
Sphingopyxis sp. H080	1759069	PRJNA294421	294421	Proteobacteria	Alphaproteobacteria	5.19487	64.6	-	LNRW01	71	4933	4747	12/15/15	4/11/17	Contig	US EPA	SAMN04252882	GCA_001467455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/455/GCA_001467455.1_ASM146745v1	-	H080
Leifsonia sp. Root227	1736496	PRJNA297942	297942	Terrabacteria group	Actinobacteria	4.06761	68.5	-	LMIO01	7	3862	3763	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04155765	GCA_001428745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/745/GCA_001428745.1_Root227	26633631	Root227
Ensifer sp. LC13	1873713	PRJNA328912	328912	Proteobacteria	Alphaproteobacteria	6.21783	62.2	-	MBSP01	74	5865	5664	7/28/16	4/13/17	Contig	Monash University Malaysia	SAMN05383998	GCA_001695795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/795/GCA_001695795.1_LC13_v1	-	LC13
Butyrivibrio sp. MC2021	1408306	PRJNA223051	223051	Terrabacteria group	Firmicutes	4.36252	44.4	-	JHXX01	32	3633	3505	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02744002	GCA_000621605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/605/GCA_000621605.1_ASM62160v1	-	MC2021
Streptomyces rimosus subsp. rimosus	132474	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.72429	72	-	JOCL01	119	7645	7285	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645418	GCA_000720685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/685/GCA_000720685.1_ASM72068v1	-	NRRL WC-3877
Curtobacterium sp. MCBA15_007	1898735	PRJNA342146	342146	Terrabacteria group	Actinobacteria	3.76864	70.5	-	MJGM01	87	3505	3378	11/2/16	4/13/17	Scaffold	Massachusetts Institute of Technology	SAMN05736484	GCA_001864905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/905/GCA_001864905.1_ASM186490v1	-	MCBA15_007
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.78626	58.8	-	LNWN01	59	4595	4448	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339851	GCA_001681485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/485/GCA_001681485.1_ASM168148v1	-	F3697
Raoultella ornithinolytica	54291	PRJNA384975	384975	Proteobacteria	Gammaproteobacteria	6.39073	55.8	-	NETI01	398	6338	5931	7/6/17	7/8/17	Contig	Zhejiang University	SAMN06854852	GCA_002215315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/315/GCA_002215315.1_ASM221531v1	-	1810
Blastomonas sp. CCH5-A3	1768761	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	4.20835	64.2	-	LSIO01	211	4105	3913	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299439	GCA_001556295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/295/GCA_001556295.1_ASM155629v1	-	CCH5-A3
Massilia sp. CF038	1881045	PRJEB18228	355492	Proteobacteria	Betaproteobacteria	5.66435	61.8	-	FQWU01	14	5199	5049	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05428948	GCA_900129765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/765/GCA_900129765.1_IMG-taxon_2690315615_annotated_assembly	-	CF038
Gordonia sp. v-85	1761786	PRJEB15013	336307	Terrabacteria group	Actinobacteria	5.43908	67.9	-	FMAX01	59	4941	4696	8/3/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487805	GCA_900094715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/715/GCA_900094715.1_IMG-taxon_2615840623_annotated_assembly	-	V-85
Pluralibacter gergoviae	61647	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.95967	58.1	-	NGRT01	27	5677	5288	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521922	GCA_002152975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/975/GCA_002152975.1_ASM215297v1	-	MGH173
Elizabethkingia meningoseptica	238	PRJEB13258	317808	FCB group	Bacteroidetes/Chlorobi group	3.85824	36.4	-	FLSV01	12	3472	3407	6/30/16	7/29/17	Contig	JUSTUS LIEBIG UNIVERSITY	SAMEA4051574	GCA_900092105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/105/GCA_900092105.1_ASM90009210v1	-	-
Aeromonas sp. MDS8	1282886	PRJNA186612	186612	Proteobacteria	Gammaproteobacteria	4.84175	61.6	-	AOTK01	138	-	-	5/2/13	1/8/14	Contig	West bengal University of Technology	SAMN02472124	GCA_000388005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/005/GCA_000388005.1_Am8ver1	24029759	MDS8
Mycobacterium fortuitum	1766	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.30119	66.2	-	LZLO01	90	6078	5895	6/17/16	4/5/17	Contig	JCVI	SAMN04634176	GCA_001673275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/275/GCA_001673275.1_ASM167327v1	-	1089381.4
Halorubrum sp. E3	1483400	PRJNA232799	232799	Euryarchaeota	Halobacteria	4.2044	65.5	-	NHPI01	2763	5498	4990	8/15/17	8/15/17	Scaffold	University of Conn.	SAMN02716036	GCA_002252955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/955/GCA_002252955.1_ASM225295v1	24782836	E3
Hyphomonas sp. UBA1474	1946614	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.43785	58.2	-	DCSE01	58	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453296	GCA_002330945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/945/GCA_002330945.1_ASM233094v1	28894102	-
Cupriavidus sp. NDB2Meth2	2003587	PRJEB20988	395445	Proteobacteria	Betaproteobacteria	6.34914	63.9	-	FYAR01	39	-	-	7/22/17	7/22/17	Contig	Griffith University	SAMEA104113273	GCA_900185655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/655/GCA_900185655.1_NDB2Meth2_Assembly_1	-	-
Microbacterium sp. Leaf203	1735677	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.44885	69.9	-	LMKF01	36	3234	3134	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151682	GCA_001421275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/275/GCA_001421275.1_Leaf203	26633631	Leaf203
Snodgrassella alvi	1196083	PRJNA339423	339423	Proteobacteria	Betaproteobacteria	2.42169	41.2	-	NAHQ01	128	2169	2047	4/13/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603572	GCA_002088655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/655/GCA_002088655.1_ASM208865v1	-	N-23
Xanthomonas translucens pv. graminis ART-Xtg29	1195885	PRJEB10857	357902	Proteobacteria	Gammaproteobacteria	4.14675	68.7	-	FLTW01	320	3556	3266	12/16/16	4/6/17	Contig	CEBITEC	SAMEA4062939	GCA_900092425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/425/GCA_900092425.1_Xtg29	-	-
Variovorax sp. OV329	1882825	PRJEB17481	351670	Proteobacteria	Betaproteobacteria	6.31321	67.8	-	FOUG01	61	5911	5755	10/31/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444747	GCA_900114785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/785/GCA_900114785.1_IMG-taxon_2687453688_annotated_assembly	-	OV329
Mesorhizobium sp. STM 4661	1297570	PRJEB1502	194510	Proteobacteria	Alphaproteobacteria	6.54739	62.4	-	CAAF01	89	6418	6045	3/21/13	5/19/17	Contig	Genoscope CEA	SAMEA2272721	GCA_000359125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/125/GCA_000359125.1_ASM35912v1	-	STM 4661
Cellulomonas sp. JCM 9808	1298613	PRJDB889	243767	Terrabacteria group	Actinobacteria	0.994123	69.3	-	BBEI01	993	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016842	GCA_001312685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/685/GCA_001312685.1_ASM131268v1	-	JCM 9808
Chryseobacterium sp. ERMR1:04	1705393	PRJNA293600	293600	FCB group	Bacteroidetes/Chlorobi group	5.53291	34.1	-	LIRF01	10	4955	4740	9/23/15	4/11/17	Scaffold	CSIR-Institute of Himalayan Bioresource Technology	SAMN04008510	GCA_001297705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/705/GCA_001297705.1_ASM129770v1	26543128	ERMR1:04
Pasteurella multocida subsp. multocida HB01	1339255	PRJNA210009	210009	Proteobacteria	Gammaproteobacteria	2.41607	40.3	chromosome:NZ_CP006976.1/CP006976.1	-	1	2314	2196	6/15/16	4/5/17	Complete Genome	Huazhong Agriculture University	SAMN03604281	GCA_001663095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/095/GCA_001663095.1_ASM166309v1	26827796	HB01
Halomonas sp. GFAJ-1	1118153	PRJNA77909	77909	Proteobacteria	Gammaproteobacteria	3.61382	53.9	-	AHBC01	101	3314	3162	12/2/11	4/11/17	Contig	University of Illinois at Chicago	SAMN00761066	GCA_000236625.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/625/GCA_000236625.3_GFAJ1_v1	22408239	GFAJ-1
Sphingobium sp. CCH11-B1	1768781	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	4.61679	64	-	LSJY01	216	4534	4264	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299475	GCA_001556865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/865/GCA_001556865.1_ASM155686v1	-	CCH11-B1
Rothia sp. HMSC068F09	1739378	PRJNA300028	300028	Terrabacteria group	Actinobacteria	2.23955	62	-	LTXV01	23	1794	1678	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480042	GCA_001812775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/775/GCA_001812775.1_ASM181277v1	-	HMSC068F09
Rhodanobacter sp. B04	1945860	PRJNA369723	369723	Proteobacteria	Gammaproteobacteria	3.80549	64.3	-	MUNV01	30	3410	3311	2/16/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN06293012	GCA_002001125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/125/GCA_002001125.1_ASM200112v1	-	B04
Thiomonas sp. 13-64-67	1970447	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	3.1543	63.9	-	NCKP01	143	3087	2873	8/16/17	8/16/17	Scaffold	None	SAMN06622187	GCA_002282795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/795/GCA_002282795.1_ASM228279v1	-	-
Sphingobacterium sp. UBA865	1947527	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	5.77467	40	-	DBGB01	42	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450324	GCA_002295765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/765/GCA_002295765.1_ASM229576v1	28894102	-
Megasphaera sp. UBA4352	1946849	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.26419	49.8	-	DGSW01	79	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451610	GCA_002394105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/105/GCA_002394105.1_ASM239410v1	28894102	-
Pseudonocardia sp. Ae356_Ps1	1885032	PRJNA336258	336258	Terrabacteria group	Actinobacteria	6.45189	73.6	-	MCIN01	13	6041	5596	1/4/17	4/17/17	Scaffold	University of East Anglia	SAMN05507018	GCA_001932395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/395/GCA_001932395.1_ASM193239v1	-	Ae356_Ps1
Afipia sp. 62-7	1895700	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	3.87898	61.6	-	MKRG01	109	3794	3148	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660497	GCA_001897905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/905/GCA_001897905.1_ASM189790v1	-	-
Neisseria sp. HMSC072C05	1715112	PRJNA296240	296240	Proteobacteria	Betaproteobacteria	2.18661	49.3	-	LTJL01	66	2159	1993	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477517	GCA_001809585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/585/GCA_001809585.1_ASM180958v1	-	HMSC072C05
Campylobacter sp. RM9261	1895637	PRJNA341055	341055	Proteobacteria	delta/epsilon subdivisions	1.63493	32.3	-	MJLP01	66	1707	1630	5/15/17	9/19/17	Contig	USDA	SAMN05687075	GCA_002139825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/825/GCA_002139825.1_ASM213982v1	28854596	RM9261
Alistipes sp. CAG:268	1262693	PRJEB800	206758	FCB group	Bacteroidetes/Chlorobi group	2.6784	61.4	-	CBGE01	64	2241	2200	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138599	GCA_000434235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/235/GCA_000434235.1_MGS268	-	-
Olsenella sp. kh2p3	1797112	PRJEB17908	353826	Terrabacteria group	Actinobacteria	2.42102	62.6	-	FPKD01	29	2125	2037	11/17/16	4/14/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487823	GCA_900119625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/625/GCA_900119625.1_IMG-taxon_2606217754_annotated_assembly	-	KH2P3
Propionibacterium sp. HMSC075A12	1739429	PRJNA300079	300079	Terrabacteria group	Actinobacteria	2.48307	60	-	LTWG01	14	2484	2260	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480351	GCA_001813655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/655/GCA_001813655.1_ASM181365v1	-	HMSC075A12
Ralstonia sp. RL	1839756	PRJNA316535	316535	Proteobacteria	Betaproteobacteria	5.04482	65.7	-	LWRX01	255	-	-	7/12/16	7/12/16	Contig	University of Delhi	SAMN04585410	GCA_001683835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/835/GCA_001683835.1_ASM168383v1	-	-
Parabacteroides sp. merdae-related_45_40	1897013	PRJNA321218	321218	FCB group	Bacteroidetes/Chlorobi group	5.33861	45.1	-	MNQY01	156	4266	3925	12/23/16	12/23/16	Scaffold	None	SAMN05717230	GCA_001915675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/675/GCA_001915675.1_ASM191567v1	27819664	-
Actinomyces sp. HMSC06A08	1581120	PRJNA269889	269889	Terrabacteria group	Actinobacteria	2.42225	56.2	-	LWOG01	25	2233	2141	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03433341	GCA_001807285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/285/GCA_001807285.1_ASM180728v1	-	HMSC06A08
Desulfovibrio sp. S3730MH75	1869297	PRJNA290197	290197	Proteobacteria	delta/epsilon subdivisions	4.14369	43.4	-	MAXI01	369	3905	3548	10/3/16	10/3/16	Contig	California Institute of Technology	SAMN05301620	GCA_001750915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/915/GCA_001750915.1_ASM175091v1	-	-
Prochlorococcus sp. HOT208_60m_808G21	1961084	PRJNA375759	375759	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.27081	31.4	-	MWOY01	212	1382	1262	3/14/17	3/16/17	Contig	Massachusetts Institute of Technology	SAMN06345444	GCA_002026015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/015/GCA_002026015.1_ASM202601v1	-	HOT208_60m_808G21
Shigella sp. FC1661	1886513	PRJNA338009	338009	Proteobacteria	Gammaproteobacteria	4.50696	50.7	-	MDGW01	611	4963	4237	8/24/16	8/24/16	Contig	Christian Medical College	SAMN05520023	GCA_001712525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/525/GCA_001712525.1_ASM171252v1	-	FC1661
Exiguobacterium sp. SH31	1843183	PRJNA319980	319980	Terrabacteria group	Firmicutes	3.02264	51.7	-	LYTG01	120	3117	2993	10/21/16	4/17/17	Contig	Universidad Andres Bello	SAMN04913988	GCA_001816105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/105/GCA_001816105.1_ASM181610v1	-	SH31
Bacteroides sp. 4_1_36	457393	PRJNA39357	39357	FCB group	Bacteroidetes/Chlorobi group	4.63876	46.4	-	ACTC01	38	3936	3617	1/4/11	5/18/17	Scaffold	Broad Institute	SAMN02463765	GCA_000185585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/585/GCA_000185585.1_ASM18558v1	-	4_1_36
Thioalkalivibrio sp. ALE30	1158181	PRJNA176950	176950	Proteobacteria	Gammaproteobacteria	2.77934	67.4	-	ARIJ01	17	2714	2594	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441682	GCA_000377465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/465/GCA_000377465.1_ASM37746v1	-	ALE30
Ruminococcus sp. CAG:382	1262957	PRJEB860	206745	Terrabacteria group	Firmicutes	1.9463	49.5	-	CBGH01	128	1888	1853	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138543	GCA_000433115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/115/GCA_000433115.1_MGS382	-	-
Paenibacillus sp. HW567	1034769	PRJNA170089	170089	Terrabacteria group	Firmicutes	6.83622	50.7	-	ARFI01	1	5937	5727	4/19/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441697	GCA_000374185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/185/GCA_000374185.1_ASM37418v1	-	HW567
Stenotrophomonas sp. SC-N050	1896671	PRJEB17069	351139	Proteobacteria	Gammaproteobacteria	4.48445	66.4	-	FOHC01	24	4135	4006	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05720615	GCA_900111475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/475/GCA_900111475.1_IMG-taxon_2651870305_annotated_assembly	-	SC-N050
Pedobacter sp. UBA4863	1947060	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.6828	37.4	-	DHDZ01	63	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453491	GCA_002399615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/615/GCA_002399615.1_ASM239961v1	28894102	-
Brevundimonas sp. 374	1150400	PRJEB16109	348609	Proteobacteria	Alphaproteobacteria	2.97144	66.3	-	FNKT01	9	2913	2831	10/20/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02787020	GCA_900102995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/995/GCA_900102995.1_IMG-taxon_2596583649_annotated_assembly	-	374
Alcanivorax sp. CP2C	1848188	PRJNA244670	244670	Proteobacteria	Gammaproteobacteria	4.7511	57	-	LXTS02	149	4463	4183	7/12/16	8/7/17	Contig	US Naval Research laboratory	SAMN04931661	GCA_001683815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/815/GCA_001683815.2_ASM168381v2	-	CP2C
Eubacterium sp. CAG:161	1262881	PRJEB732	206669	Terrabacteria group	Firmicutes	2.51523	35	-	CAYQ01	48	2224	2196	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138505	GCA_000432355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/355/GCA_000432355.1_MGS161	-	-
Janthinobacterium sp. HH104	1537276	PRJNA309039	309039	Proteobacteria	Betaproteobacteria	6.38653	62.6	-	LRIB01	65	5701	5550	10/11/16	4/13/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04320689	GCA_001758715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/715/GCA_001758715.1_ASM175871v1	-	HH104
Caulobacter sp. UNC358MFTsu5.1	1449049	PRJNA234921	234921	Proteobacteria	Alphaproteobacteria	5.40264	69.5	-	JONW01	13	4952	4840	6/25/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02744638	GCA_000712075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/075/GCA_000712075.1_ASM71207v1	-	UNC358MFTsu5.1
Psychrobacter sp. JB193	2024406	PRJNA387187	387187	Proteobacteria	Gammaproteobacteria	3.4766	43	-	NRGY01	10	3035	2936	9/5/17	9/7/17	Contig	"Dutton Lab, UCSD"	SAMN07141171	GCA_002285555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/555/GCA_002285555.1_ASM228555v1	28644126	JB193
Acidovorax sp. Root219	1736493	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	6.82094	66.8	-	LMIJ01	48	6279	6091	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155762	GCA_001428665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/665/GCA_001428665.1_Root219	26633631	Root219
Marinobacter sp. EhC06	1849169	PRJNA321723	321723	Proteobacteria	Gammaproteobacteria	4.62018	57.2	-	LXYO01	38	4255	4148	5/24/16	4/12/17	Contig	University of Alberta	SAMN04965934	GCA_001650915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/915/GCA_001650915.1_ASM165091v1	-	EhC06
Sulfitobacter sp. UBA1132	1947582	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.54875	60.5	-	DCAN01	22	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06457041	GCA_002311545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/545/GCA_002311545.1_ASM231154v1	28894102	-
Erythrobacter sp. HI0063	1822240	PRJNA305749	305749	Proteobacteria	Alphaproteobacteria	3.25815	63.3	-	LWFF01	356	3146	2962	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580779	GCA_001635685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/685/GCA_001635685.1_ASM163568v1	-	HI0063
Epulopiscium sp. Nele67-Bin001	1764960	PRJNA294498	294498	Terrabacteria group	Firmicutes	1.87804	34.1	-	LNZO01	242	1787	1522	2/27/17	2/27/17	Scaffold	King Abdullah University of Science and Technology (KAUST)	SAMN04288924	GCA_002007375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/375/GCA_002007375.1_Nele67M	-	-
Nocardioides sp. Root79	1736600	PRJNA297942	297942	Terrabacteria group	Actinobacteria	5.13911	71.4	-	LMIP01	15	4842	4700	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155869	GCA_001428765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/765/GCA_001428765.1_Root79	26633631	Root79
Paracoccus sp. UBA4165	1947053	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.18106	64.9	-	DFVH01	138	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451760	GCA_002380505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/505/GCA_002380505.1_ASM238050v1	28894102	-
Methylobacterium sp. Leaf102	1736253	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.65968	68.9	-	LMMX01	41	4313	4131	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151633	GCA_001422425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/425/GCA_001422425.1_Leaf102	26633631	Leaf102
Citrobacter sp. MGH110	1686383	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.00508	51.9	-	LESS01	7	4890	4646	6/19/15	4/10/17	Scaffold	Broad Institute	SAMN03280168	GCA_001037515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/515/GCA_001037515.1_Citr_freu_complex_MGH110_V1	-	MGH110
Treponema sp. UBA778	1947756	PRJNA348753	348753	Spirochaetes	Spirochaetia	1.85419	51.2	-	DBJK01	84	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456206	GCA_002296785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/785/GCA_002296785.1_ASM229678v1	28894102	-
Novosphingobium sp. CF614	1884364	PRJEB17298	351452	Proteobacteria	Alphaproteobacteria	4.21226	65.4	-	FOOR01	66	3848	3713	10/31/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05518801	GCA_900113255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/255/GCA_900113255.1_IMG-taxon_2687453689_annotated_assembly	-	CF614
Lactobacillus sp. HMSC061B07	1739373	PRJNA300023	300023	Terrabacteria group	Firmicutes	3.06865	46.5	-	LTXZ01	102	3058	2871	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480037	GCA_001812685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/685/GCA_001812685.1_ASM181268v1	-	HMSC061B07
Enterococcus sp. HMSC078F03	1739314	PRJNA299964	299964	Terrabacteria group	Firmicutes	3.00021	37.2	-	LTFT01	81	3062	2915	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477665	GCA_001811595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/595/GCA_001811595.1_ASM181159v1	-	HMSC078F03
Prevotella sp. HMSC077E08	1739520	PRJNA300171	300171	FCB group	Bacteroidetes/Chlorobi group	3.10117	44.1	-	LTTE01	135	2660	2493	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480437	GCA_001815315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/315/GCA_001815315.1_ASM181531v1	-	HMSC077E08
Pantoea sp. BL1	1628190	PRJNA277252	277252	Proteobacteria	Gammaproteobacteria	5.33146	53.7	-	JZRH01	121	4996	4819	3/27/15	4/10/17	Contig	University of Malaya	SAMN03388690	GCA_000963985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/985/GCA_000963985.1_ASM96398v1	-	BL1
Sulfurovum sp. UBA2215	1947602	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	1.51746	40.5	-	DCUL01	10	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453170	GCA_002327825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/825/GCA_002327825.1_ASM232782v1	28894102	-
Polaromonas sp. 28-63-22	1970416	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	3.12382	62.6	-	NCGI01	548	3224	3010	8/16/17	8/16/17	Scaffold	None	SAMN06622298	GCA_002256925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/925/GCA_002256925.1_ASM225692v1	-	-
Serratia sp. Ag1	1524467	PRJNA255826	255826	Proteobacteria	Gammaproteobacteria	5.34757	52.3	-	JQEI01	110	4988	4756	8/25/14	4/9/17	Contig	New Mexico State University	SAMN02991040	GCA_000743355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/355/GCA_000743355.1_ASM74335v1	25767231	Ag1
Mycobacterium sp. 141	1120797	PRJNA187931	187931	Terrabacteria group	Actinobacteria	4.53574	65.6	-	ARNS01	36	4348	4128	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441653	GCA_000382405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/405/GCA_000382405.1_ASM38240v1	-	141
Streptococcus sp. F0442	999425	PRJNA64901	64901	Terrabacteria group	Firmicutes	2.23125	41.8	-	AGZZ01	3	2229	2099	11/6/12	4/17/17	Scaffold	Broad Institute	SAMN02463946	GCA_000314795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/795/GCA_000314795.2_Strept_sp_F0442_V1	-	F0442
Bradyrhizobium sp. WSM2254	1188263	PRJNA165519	165519	Proteobacteria	Alphaproteobacteria	9.08652	63.9	-	AXAB01	100	8586	8130	9/30/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440783	GCA_000472645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/645/GCA_000472645.1_ASM47264v1	-	WSM2254
Shewanella sp. UCD-KL12	1917163	PRJNA353005	353005	Proteobacteria	Gammaproteobacteria	5.69153	43.2	-	MPHJ01	61	4933	4714	1/19/17	4/17/17	Contig	UC Davis	SAMN06007749	GCA_001957125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/957/125/GCA_001957125.1_ASM195712v1	-	UCD-KL12
Escherichia sp. TW09308	754331	PRJNA59763	59763	Proteobacteria	Gammaproteobacteria	4.80983	50.3	-	AEME01	1	4996	4583	4/21/11	5/18/17	Contig	"Georgia Institute of Technology, School of Civil and Environmental Engineering"	SAMN02469841	GCA_000208565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/208/565/GCA_000208565.2_ASM20856v2	21482770	TW09308
Arthrobacter sp. 135MFCol5.1	1158050	PRJNA175164	175164	Terrabacteria group	Actinobacteria	4.45357	66.1	-	ARGQ01	36	4108	3979	4/19/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441688	GCA_000374865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/865/GCA_000374865.1_ASM37486v1	-	135MFCol5.1
Corynebacterium sp. KPL1821	1203560	PRJNA169440	169440	Terrabacteria group	Actinobacteria	2.47087	58.4	-	AXLZ01	7	2346	2238	10/21/13	4/17/17	Scaffold	Broad Institute	SAMN02597006	GCA_000478115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/115/GCA_000478115.1_Cory_sp_KPL1821_V1	-	KPL1821
Staphylococcus sp. HMSC077B09	1715099	PRJNA296227	296227	Terrabacteria group	Firmicutes	2.33436	32.5	-	LTLC01	72	2278	2164	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477511	GCA_001808715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/715/GCA_001808715.1_ASM180871v1	-	HMSC077B09
Enterobacter sp. BIDMC 30	1329842	PRJNA202041	202041	Proteobacteria	Gammaproteobacteria	4.78673	54.7	-	JCLA01	1	4628	4417	2/3/14	4/9/17	Scaffold	Broad Institute	SAMN02138660	GCA_000534355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/355/GCA_000534355.1_Ente_cloa_complex_BIDMC_30_V1	-	BIDMC 30
Rhodococcus sp. PML026	1356405	PRJNA277135	277135	Terrabacteria group	Actinobacteria	5.17777	64.6	-	JZIS01	16	4840	4694	3/26/15	4/10/17	Scaffold	University of Exeter	SAMN03384349	GCA_000963615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/615/GCA_000963615.1_ASM96361v1	25953162	PML026
Sporosarcina psychrophila	1476	PRJNA313115	313115	Terrabacteria group	Firmicutes	4.67419	40.3	chromosome:NZ_CP014616.1/CP014616.1	-	1	4456	4269	3/14/16	4/12/17	Complete Genome	Shanghai Jiao Tong University	SAMN04515682	GCA_001590685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/590/685/GCA_001590685.1_ASM159068v1	-	DSM 6497
Sphingomonas sp. Leaf208	1735679	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.70327	64.4	-	LMKH01	39	4243	4065	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151683	GCA_001421415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/415/GCA_001421415.1_Leaf208	26633631	Leaf208
Clostridium sp. mt5	1622073	PRJEB9344	283599	Terrabacteria group	Firmicutes	2.54284	27.4	-	CVPI01	6	2453	2331	5/12/15	4/10/17	Scaffold	URMITE	SAMEA3381202	GCA_001243045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/045/GCA_001243045.1_Clostridium_niameyense	-	mt5
Pasteurella multocida subsp. multocida PMTB2.1	1455592	PRJNA236642	236642	Proteobacteria	Gammaproteobacteria	2.31514	40.3	chromosome:NZ_CP007205.2/CP007205.2	-	1	2198	2079	3/2/16	8/30/17	Complete Genome	Institute of Bioscience	SAMN04528716	GCA_001578435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/435/GCA_001578435.2_ASM157843v2	-	PMTB2.1
Frankia sp. Cc1.17	573497	PRJNA217936	217936	Terrabacteria group	Actinobacteria	8.36102	71.4	-	MBLM01	195	6964	6418	10/26/16	4/17/17	Contig	University of New Hamshire	SAMN02343076	GCA_001854655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/655/GCA_001854655.1_ASM185465v1	-	Cc1.17
Flavobacterium sp. JRM	1566022	PRJNA265078	265078	FCB group	Bacteroidetes/Chlorobi group	5.38072	32.9	-	JSYO01	169	4637	4470	12/31/14	4/10/17	Contig	GCAT-SEEK	SAMN03145169	GCA_000812985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/985/GCA_000812985.1_ASM81298v1	-	JRM
Klebsiella sp. 10982	1196034	PRJNA167775	167775	Proteobacteria	Gammaproteobacteria	6.08233	56.6	-	AKYX01	218	6284	5883	1/27/14	2/21/17	Contig	Institute for Genome Science	SAMN02641600	GCA_000523395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/395/GCA_000523395.1_10982.fasta	24395222	10982
Bacillus safensis	561879	PRJNA395369	395369	Terrabacteria group	Firmicutes	3.73496	41.4	-	NQLR01	90	3844	3747	8/29/17	8/30/17	Contig	Bielefeld University	SAMN07372732	GCA_002276315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/315/GCA_002276315.1_ASM227631v1	-	7783
Acinetobacter sp. NIPH 758	1217712	PRJNA183309	183309	Proteobacteria	Gammaproteobacteria	4.07023	41.2	-	APPC01	13	3852	3668	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01828169	GCA_000368345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/345/GCA_000368345.1_Acin_sp_NIPH_758_V1	-	NIPH 758
Bordetella holmesii CDC-H809-BH	1331212	PRJNA202124	202124	Proteobacteria	Betaproteobacteria	3.58423	62.7	-	JMGZ01	153	3618	3139	4/29/14	4/2/17	Contig	JCVI	SAMN02263912	GCA_000649145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/145/GCA_000649145.1_gbb16v01	24948754	CDC-H809-BH
Paeniclostridium sordellii	1505	PRJEB8134	277659	Terrabacteria group	Firmicutes	3.44202	27.3	-	CELF01	26	3347	3243	3/13/15	4/4/17	Contig	WTSI	SAMEA1572082	GCA_001372575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/575/GCA_001372575.1_W2948	-	W2948
Actinobacillus equuli subsp. equuli	202947	PRJNA247050	247050	Proteobacteria	Gammaproteobacteria	2.43153	40.3	chromosome:NZ_CP007715.1/CP007715.1	-	1	2277	2180	12/15/14	4/9/17	Complete Genome	"Ontario Veterinary College, University of Guelph"	SAMN02781117	GCA_000801145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/145/GCA_000801145.1_ASM80114v1	-	19392
Staphylococcus equorum	246432	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.90932	32.8	-	LNPZ01	52	2824	2681	9/28/16	4/5/17	Scaffold	Tufts University	SAMN04244250	GCA_001747815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/815/GCA_001747815.1_ASM174781v1	-	947_12
Alcaligenes faecalis	511	PRJNA353361	353361	Proteobacteria	Betaproteobacteria	4.3879	56.8	-	MSZN01	61	4079	3960	5/9/17	5/22/17	Contig	New Jersey Medical School-Rutgers University	SAMN06200344	GCA_002120075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/075/GCA_002120075.1_ASM212007v1	-	GZAF1
Chlamydia muridarum	83560	PRJNA227769	227769	PVC group	Chlamydiae	1.07295	40.3	chromosome:NZ_CP009760.1/CP009760.1	-	1	952	901	11/5/14	4/2/17	Complete Genome	UTHSCSA	SAMN02402710	GCA_000772145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/145/GCA_000772145.1_ASM77214v1	-	Nigg3
Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521	1215095	PRJDB203	171622	Proteobacteria	Gammaproteobacteria	6.97334	62.8	-	BBQB01	59	6393	6211	12/13/14	4/3/17	Contig	National Institute of Technology and Evaluation	SAMD00018760	GCA_000813225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/225/GCA_000813225.1_ASM81322v1	-	NBRC 3521
Enterococcus cecorum	44008	PRJNA268097	268097	Terrabacteria group	Firmicutes	2.43896	36.3	chromosome:CP010059.1	-	1	-	-	10/16/15	10/16/15	Chromosome	NC State University	SAMN03202984	GCA_001318175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/175/GCA_001318175.1_ASM131817v1	-	CE1
Vibrio cyclitrophicus ZF28	1136167	PRJNA81879	81879	Proteobacteria	Gammaproteobacteria	4.90003	43.6	-	AIDI02	73	4303	4176	3/26/12	4/5/17	Scaffold	Massachusetts Institute of Technology	SAMN02470484	GCA_000256285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/285/GCA_000256285.2_ASM25628v2	22491847	ZF28
Pseudomonas fragi	296	PRJNA397499	397499	Proteobacteria	Gammaproteobacteria	4.97062	58.4	-	NQKS01	52	4636	4450	8/24/17	8/27/17	Scaffold	CSIRO Agriculture and Food	SAMN07459804	GCA_002269565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/565/GCA_002269565.1_ASM226956v1	-	F1793
Pseudoalteromonas luteoviolacea	43657	PRJNA257559	257559	Proteobacteria	Gammaproteobacteria	5.49073	42.1	-	JPWZ01	263	4826	4549	4/28/16	4/5/17	Contig	Technical University of Denmark	SAMN02953434	GCA_001634065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/065/GCA_001634065.1_ASM163406v1	-	NCIMB 2035
Rhizobium phaseoli	396	PRJNA403813	403813	Proteobacteria	Alphaproteobacteria	6.53424	61.5	-	NWSO01	64	6366	6084	9/25/17	9/25/17	Contig	Northwest A&F University	SAMN07626386	GCA_002355115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/115/GCA_002355115.1_ASM235511v1	-	Y18
Elizabethkingia anophelis	1117645	PRJNA317034	317034	FCB group	Bacteroidetes/Chlorobi group	4.08405	35.7	-	LWDS01	18	3755	3628	8/11/16	4/6/17	Scaffold	"E-Da Hospital, I-Shou University"	SAMN04599207	GCA_001703835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/703/835/GCA_001703835.1_ASM170383v1	27789647	EM361-97
Pseudomonas psychrotolerans	237610	PRJNA360021	360021	Proteobacteria	Gammaproteobacteria	5.25285	65.9	-	MTLN01	16	4892	4775	2/9/17	4/6/17	Contig	Institute of Microbial Technology	SAMN06199022	GCA_001991015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/015/GCA_001991015.1_ASM199101v1	-	SDS18
Xanthomonas arboricola pv. juglandis	195709	PRJNA275691	275691	Proteobacteria	Gammaproteobacteria	5.15746	65.4	-	JZEG01	14	4544	4222	5/27/15	4/3/17	Scaffold	INRA	SAMN03352177	GCA_001013495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/013/495/GCA_001013495.1_ASM101349v1	-	CFBP 7179
Salinispora pacifica DSM 45549	999545	PRJNA87031	87031	Terrabacteria group	Actinobacteria	5.1982	69.4	-	AQZW01	3	4992	4578	4/22/13	5/19/17	Scaffold	JGI	SAMN02261320	GCA_000379065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/065/GCA_000379065.1_ASM37906v1	-	DSM 45549
Leptospira kirschneri serovar Bim str. PUO 1247	1240688	PRJNA177132	177132	Spirochaetes	Spirochaetia	4.3772	35.9	-	ANIF01	158	3958	3605	3/15/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01801597	GCA_000347215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/215/GCA_000347215.1_gls454042v01	-	PUO 1247
Xanthomonas vasicola pv. vasculorum NCPPB 890	1184265	PRJNA163305	163305	Proteobacteria	Gammaproteobacteria	4.95105	63.2	-	AKBN01	2565	5210	4999	7/17/12	7/22/14	Scaffold	University of Exeter	SAMN02439006	GCA_000278055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/055/GCA_000278055.1_Xvv890v1	-	NCPPB 890
Chlamydia muridarum	83560	PRJNA227769	227769	PVC group	Chlamydiae	1.07295	40.3	chromosome:NZ_CP009608.1/CP009608.1	-	1	949	897	10/20/14	4/2/17	Complete Genome	UTHSCSA	SAMN03097379	GCA_000767405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/405/GCA_000767405.1_ASM76740v1	-	Nigg3
Rhodococcus fascians LMG 3605	1443902	PRJNA233522	233522	Terrabacteria group	Actinobacteria	5.44336	64.6	-	JMEP01	28	5123	4976	9/30/14	4/2/17	Scaffold	Oregon State University	SAMN02570001	GCA_000761015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/015/GCA_000761015.1_R_fas_LMG3605	-	LMG 3605
Campylobacter lanienae	75658	PRJNA340997	340997	Proteobacteria	delta/epsilon subdivisions	1.62755	34.6	-	MJJK01	23	1678	1596	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687017	GCA_002138565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/565/GCA_002138565.1_ASM213856v1	28854596	P0101
Leclercia adecarboxylata	83655	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.65114	55.7	-	DCFE01	60	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453769	GCA_002315075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/075/GCA_002315075.1_ASM231507v1	28894102	-
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28415	32.4	chromosome:AP017598.1	-	1	-	-	1/24/17	1/27/17	Chromosome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053850	GCA_002356775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/775/GCA_002356775.1_ASM235677v1	-	M99015
Vibrio campbellii CAIM 519 = NBRC 15631	1224742	PRJDB724	203001	Proteobacteria	Gammaproteobacteria	5.1169	45	-	BAOF01	387	4754	4546	5/14/13	4/1/17	Contig	University of Miyazaki	SAMD00036659	GCA_000400345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/345/GCA_000400345.1_ASM40034v1	23710045	CAIM 519 = NBRC 15631
Mycobacterium chelonae	1774	PRJNA347845	347845	Terrabacteria group	Actinobacteria	4.93896	64.2	-	MLIM01	72	4835	4708	10/26/16	4/5/17	Contig	University of Georgia	SAMN05897994	GCA_001853865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/865/GCA_001853865.1_ASM185386v1	-	15511
Actinomyces naeslundii	1655	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.14441	67.8	-	MSRS01	41	2645	2507	1/18/17	4/6/17	Scaffold	King's College London	SAMN05898700	GCA_001956555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/555/GCA_001956555.1_ASM195655v1	-	MB-1
Geobacillus sp. LEMMY01	1954237	PRJNA373874	373874	Terrabacteria group	Firmicutes	3.58607	51.9	-	MVKA01	76	3818	3372	3/20/17	3/22/17	Contig	Universidade Federal do Rio de Janeiro	SAMN06309877	GCA_002042905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/905/GCA_002042905.1_ASM204290v1	-	LEMMY01
Streptococcus sobrinus TCI-98	1074065	PRJNA71899	71899	Terrabacteria group	Firmicutes	2.1705	43.2	-	AGGO01	595	2124	1895	10/6/11	3/30/17	Contig	JCVI	SAMN02436341	GCA_000228045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/045/GCA_000228045.2_SMUT1-NEX_25-98	-	TCI-98
Morganella morganii	582	PRJNA376738	376738	Proteobacteria	Gammaproteobacteria	3.5679	51.1	-	MWUC01	127	3353	3227	4/3/17	4/5/17	Contig	University of Central Florida	SAMN06446007	GCA_002077675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/675/GCA_002077675.1_ASM207767v1	-	AA1
Staphylococcus sciuri subsp. sciuri	147467	PRJEB17623	352358	Terrabacteria group	Firmicutes	2.74425	32.5	-	FPED01	7	2734	2620	11/7/16	4/5/17	Scaffold	INRA-MIG	SAMEA4534378	GCA_900117375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/375/GCA_900117375.1_SSCIU	-	ATCC 29059
Enterococcus hirae	1354	PRJNA342049	342049	Terrabacteria group	Firmicutes	3.17827	36.6	-	MJDV01	47	3026	2818	4/3/17	4/5/17	Contig	Lethbridge Research Centre	SAMN05735019	GCA_002077415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/415/GCA_002077415.1_ASM207741v1	28270110	F0711D 102
Burkholderia cepacia	292	PRJNA277425	277425	Proteobacteria	Betaproteobacteria	8.84358	66.1	-	LDWR01	189	8090	7662	6/24/15	4/3/17	Contig	University of Malaya	SAMN03751789	GCA_001039005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/005/GCA_001039005.1_ASM103900v1	-	LK29
Vibrio nigripulchritudo MADA3021	1238443	PRJEB556	317441	Proteobacteria	Gammaproteobacteria	6.28996	45.7	-	CANX01	136	5683	5604	10/1/13	8/3/17	Contig	Genoscope CEA	SAMEA3146301	GCA_900067775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/067/775/GCA_900067775.1_ASP_2417	23739050	MADA3021
Pantoea agglomerans	549	PRJNA255804	255804	Proteobacteria	Gammaproteobacteria	4.82789	55.2	-	JPOT02	4	4529	4339	8/26/14	4/5/17	Scaffold	Agriculture and Agri-Food Canada	SAMN02929135	GCA_000743785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/785/GCA_000743785.2_ASM74378v2	27313290	4
Mycobacterium africanum MAL010118	1354176	PRJNA211660	211660	Terrabacteria group	Actinobacteria	4.41657	65.5	-	JLAC01	5	4301	4058	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02231127	GCA_000666625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/625/GCA_000666625.1_Myco_afri_MAL010118_V1	-	MAL010118
Mycobacterium colombiense	339268	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.56101	67.5	-	MBEO01	150	5262	5017	1/18/17	4/6/17	Contig	JCVI	SAMN04634276	GCA_001954075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/075/GCA_001954075.1_ASM195407v1	-	IS-2214
Gallibacterium anatis str. Avicor	1396512	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.3743	39.7	-	JPJM01	67	2252	2113	11/5/14	4/2/17	Contig	University of Copenhagen	SAMN02344106	GCA_000772295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/295/GCA_000772295.1_ASM77229v1	-	Avicor
Leptospira weilii serovar Heyan	1851191	PRJNA321948	321948	Spirochaetes	Spirochaetia	4.26537	40.7	-	MSFX01	202	4207	3888	1/23/17	4/6/17	Contig	NIFDC	SAMN06103775	GCA_001969935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/935/GCA_001969935.1_ASM196993v1	-	L231
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96587	64.1	-	FVCC01	19	4904	4740	3/10/17	3/18/17	Contig	SC	SAMEA2070540	GCA_900131105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/105/GCA_900131105.1_10665_3_54	-	224
Aeromonas veronii	654	PRJNA296464	296464	Proteobacteria	Gammaproteobacteria	4.67533	58.6	-	LKJY01	70	4343	4112	11/19/15	4/4/17	Contig	Texas Tech University	SAMN04099659	GCA_001446695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/695/GCA_001446695.1_ASM144669v1	26824353	TTU2014-131ASC
Corynebacterium ulcerans	65058	PRJNA295096	295096	Terrabacteria group	Actinobacteria	2.49784	53.5	-	LJVH01	28	2320	2067	9/28/15	4/4/17	Contig	Federal University of Minas Gerais	SAMN04041014	GCA_001302345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/345/GCA_001302345.1_ASM130234v1	27034487	Apr-14
Leuconostoc pseudomesenteroides	33968	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.92427	39.1	-	MPEE01	78	1953	1793	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981477	GCA_002092375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/375/GCA_002092375.1_ASM209237v1	28217118	LMGCF15
Klebsiella aerogenes MGH 61	1439320	PRJNA234260	234260	Proteobacteria	Gammaproteobacteria	5.32332	55	-	JMUL01	13	5217	4957	5/19/14	4/6/17	Scaffold	Broad Institute	SAMN02581393	GCA_000692155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/155/GCA_000692155.1_Ente_aero_MGH_61_V1	-	MGH 61
Streptobacillus moniliformis	34105	PRJNA319313	319313	Fusobacteria	Fusobacteriia	1.67641	26.6	-	LWTG01	266	1570	1442	6/4/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04892748	GCA_001657685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/685/GCA_001657685.1_ASM165768v1	-	A378/1
Xanthomonas perforans	442694	PRJNA276648	276648	Proteobacteria	Gammaproteobacteria	5.14253	64.9	-	JZVS01	98	4701	4335	5/18/15	4/3/17	Contig	Universidade de Sao Paulo	SAMN03379528	GCA_001009885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/885/GCA_001009885.1_ASM100988v1	26089818	GEV940
Streptococcus pseudopneumoniae	257758	PRJNA294662	294662	Terrabacteria group	Firmicutes	2.182	39.8	-	LJHI01	204	2381	2065	9/30/15	4/4/17	Contig	Aarhus University	SAMN04028195	GCA_001304545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/545/GCA_001304545.1_ASM130454v1	27100044	338-14
Kingella kingae KK199	1305776	PRJEB1628	194477	Proteobacteria	Betaproteobacteria	1.99125	46.8	-	CBTF01	1	2015	1796	9/12/13	4/2/17	Scaffold	URMITE	SAMEA2272761	GCA_000470115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/115/GCA_000470115.1_KK199	-	KK199
Streptococcus parauberis	1348	PRJNA273857	273857	Terrabacteria group	Firmicutes	2.09406	35.4	-	NSGR01	11	2122	2072	9/27/17	9/27/17	Contig	Norfolk State University	SAMN05210279	GCA_002382965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/965/GCA_002382965.1_ASM238296v1	-	SP158-29
Vibrio anguillarum	55601	PRJNA267184	267184	Proteobacteria	Gammaproteobacteria	4.17159	44.6636	chromosome I:CP010046.1; chromosome II:CP010047.1; plasmid pJM1:CP016253.1	-	3	3569	3446	2/7/17	2/7/17	Chromosome	University of Copenhagen	SAMN03178219	GCA_001989715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/715/GCA_001989715.1_ASM198971v1	-	87-9-117
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.85442	55.1	-	JTCC02	71	4799	4551	11/17/14	3/25/17	Contig	JCVI	SAMN03012836	GCA_000784095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/095/GCA_000784095.2_SPADES_assembly_of_Enterobacter_cloacae_ND20	-	ND20
Actinomyces oris	544580	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.11746	68.2	-	MSKL01	46	2611	2477	1/5/17	4/6/17	Scaffold	King's College London	SAMN05898729	GCA_001937665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/665/GCA_001937665.1_ASM193766v1	-	P6N
Haemophilus parainfluenzae	729	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.99718	39.4	-	JVPX01	23	1942	1851	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197401	GCA_001055885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/885/GCA_001055885.1_ASM105588v1	26230489	209_HPAR
Agrobacterium sp. TS43	477196	PRJNA205090	205090	Proteobacteria	Alphaproteobacteria	5.6486	59.8	-	ASYB01	176	5445	5138	1/22/16	4/17/17	Contig	Huazhong Agricultural University	SAMN04395163	GCA_001526605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/605/GCA_001526605.1_ASM152660v1	-	TS43
Streptococcus parasanguinis	1318	PRJNA280655	280655	Terrabacteria group	Firmicutes	2.12255	41.8	-	LAWB01	109	2067	1981	3/11/16	4/5/17	Contig	University of Malaya	SAMN03480630	GCA_001588805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/805/GCA_001588805.1_ASM158880v1	-	BVME8
Fusobacterium necrophorum subsp. funduliforme	143387	PRJNA315619	315619	Fusobacteria	Fusobacteriia	2.09895	35.1	-	LVET01	56	2015	1918	3/25/16	4/5/17	Contig	Aarhus University	SAMN04569319	GCA_001597325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/325/GCA_001597325.1_ASM159732v1	-	LS_1280
[Clostridium] clostridioforme	1531	PRJEB17285	351463	Terrabacteria group	Firmicutes	5.46575	49	-	FOOJ01	148	5376	4946	10/31/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660211	GCA_900113155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/155/GCA_900113155.1_IMG-taxon_2593339147_annotated_assembly	-	ATCC 25537
Citrobacter freundii	546	PRJNA294997	294997	Proteobacteria	Gammaproteobacteria	4.89165	52	-	LJOF01	8	4813	4521	10/2/15	4/4/17	Scaffold	"Graduate School at Shenzhen, Tsinghua University"	SAMN04038590	GCA_001306025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/025/GCA_001306025.1_ASM130602v1	27026792	ST1
Leptospira santarosai str. 200403458	1193058	PRJNA167252	167252	Spirochaetes	Spirochaetia	4.00169	41.9	-	AKWI02	44	4017	3700	10/17/12	4/1/17	Contig	J. Craig Venter Institute	SAMN02436577	GCA_000306575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/575/GCA_000306575.2_gls454130v02	-	200403458
Streptococcus gallolyticus	315405	PRJEB16607	349921	Terrabacteria group	Firmicutes	2.1823	37.5	-	FNUH01	19	2155	2056	10/22/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910295	GCA_900107905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/905/GCA_900107905.1_IMG-taxon_2595698218_annotated_assembly	-	VTM1R27
Candidatus Sulcia muelleri	336810	PRJNA343314	343314	FCB group	Bacteroidetes/Chlorobi group	0.231377	24.2	-	NJHQ01	125	279	226	8/29/17	8/29/17	Contig	Cornell University	SAMN07267899	GCA_002277765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/765/GCA_002277765.1_ASM227776v1	-	Neo
Pantoea ananatis	553	PRJEB7512	270271	Proteobacteria	Gammaproteobacteria	4.49032	54	-	CVNG01	71	4166	3955	4/21/15	4/4/17	Contig	AUSTRIAN INSTITUTE OF TECHNOLOGY	SAMEA3303364	GCA_001369375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/369/375/GCA_001369375.1_Pantoea_ananatis_S7	-	S7
Streptococcus anginosus	1328	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.97485	38.8	-	JWEZ01	60	1924	1825	7/10/15	4/3/17	Contig	University of Washington	SAMN03197009	GCA_001069165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/165/GCA_001069165.1_ASM106916v1	26230489	1043_SSUI
Staphylococcus lugdunensis ACS-027-V-Sch2	883164	PRJNA52127	52127	Terrabacteria group	Firmicutes	2.61101	33.9	-	AGZW01	4	2499	2385	11/6/12	4/1/17	Scaffold	Broad Institute	SAMN02463890	GCA_000316075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/075/GCA_000316075.2_Stap_lugd_ACS-027-V-Sch2_V1	-	ACS-027-V-Sch2
Riemerella anatipestifer	34085	PRJNA309362	309362	FCB group	Bacteroidetes/Chlorobi group	2.15653	35	-	LUDH01	61	2022	1956	6/20/16	4/5/17	Contig	Sichuan Agricultural University	SAMN04432141	GCA_001670615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/670/615/GCA_001670615.1_RCAD0188	-	RCAD0188
Acinetobacter pittii	48296	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.92095	38.7	-	BBST01	37	3815	3651	2/3/15	4/3/17	Contig	National Institute of Technology and Evaluation	SAMD00019891	GCA_000836015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/836/015/GCA_000836015.1_ASM83601v1	-	DSM 25618
Xanthomonas euvesicatoria	456327	PRJNA254374	254374	Proteobacteria	Gammaproteobacteria	5.03737	64.7	-	JPYC01	1491	4656	3788	10/21/15	4/4/17	Contig	Institute for Agricultural and Fisheries Research (ILVO)	SAMN02903176	GCA_001401555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/555/GCA_001401555.1_Xeu_LMG27970	-	LMG 27970
Pseudomonas amygdali pv. mellea	251721	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.89522	58.2	-	LJQS01	260	5425	4927	10/20/15	4/4/17	Scaffold	University of Toronto	SAMN03976269	GCA_001400875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/875/GCA_001400875.1_PmeICMP5711	-	ICMP5711
Brucella sp. 04-5288	1341688	PRJNA217060	217060	Proteobacteria	Alphaproteobacteria	3.3069	57.3	-	AXNB01	63	3351	3137	10/24/13	4/9/17	Scaffold	Broad Institute	SAMN02334514	GCA_000480195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/195/GCA_000480195.1_Bruc_sp_04-5288_V1	-	Apr-88
Enterobacter asburiae	61645	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.42327	56.2	-	LDCE01	36	4248	4098	5/21/15	4/3/17	Contig	JCVI	SAMN03495967	GCA_001011855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/855/GCA_001011855.1_ASM101185v1	-	GN02073
Chlamydia muridarum	83560	PRJNA227769	227769	PVC group	Chlamydiae	1.07295	40.3	chromosome:NZ_CP009609.1/CP009609.1	-	1	952	900	10/20/14	4/2/17	Complete Genome	UTHSCSA	SAMN03097380	GCA_000767445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/445/GCA_000767445.1_ASM76744v1	-	Nigg3
Pediococcus acidilactici	1254	PRJNA308163	308163	Terrabacteria group	Firmicutes	1.78568	42.5	-	LQNQ01	60	1724	1596	4/30/16	4/5/17	Contig	ICAR-National Research Centre on Camel	SAMN04387728	GCA_001634455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/455/GCA_001634455.1_ASM163445v1	-	NRCC1
Vibrio alginolyticus NBRC 15630 = ATCC 17749	1219076	PRJDB355	172324	Proteobacteria	Gammaproteobacteria	5.04967	44.6	-	BATK01	76	4624	4497	9/12/13	4/2/17	Contig	National Institute of Technology and Evaluation	SAMD00041824	GCA_000467145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/145/GCA_000467145.1_ASM46714v1	-	NBRC 15630
Pseudoalteromonas sp. PAMC 22718	1175295	PRJNA159457	159457	Proteobacteria	Gammaproteobacteria	4.18462	40.2	-	AJTK01	56	3840	3637	5/16/12	5/19/17	Contig	Korea Polar Research Institute	SAMN02470171	GCA_000263075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/075/GCA_000263075.1_PAMC22718V0	22815453	PAMC 22718
Acinetobacter calcoaceticus	471	PRJNA275553	275553	Proteobacteria	Gammaproteobacteria	3.94368	38.5	-	JYGV01	35	3819	3523	3/13/15	4/10/17	Contig	Thompson Rivers University	SAMN03349710	GCA_000952075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/075/GCA_000952075.1_ASM95207v1	26272576	GK1
Pseudomonas savastanoi	29438	PRJNA287079	287079	Proteobacteria	Gammaproteobacteria	6.05767	57.9	-	LGKR01	121	5675	5197	9/18/15	4/4/17	Scaffold	University of Toronto	SAMN03837775	GCA_001293725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/725/GCA_001293725.1_Psv4352	-	4352
Pseudomonas syringae pv. tomato K40	673189	PRJNA40341	40341	Proteobacteria	Gammaproteobacteria	6.15366	58.6	-	ADFY01	582	5893	5505	2/4/10	5/19/17	Contig	Virginia Tech	SAMN02472092	GCA_000177455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/455/GCA_000177455.1_ASM17745v1	-	K40
Xanthomonas fuscans subsp. fuscans	366649	PRJNA272380	272380	Proteobacteria	Gammaproteobacteria	5.07369	64.8	-	JXHS03	135	4604	4083	1/13/15	4/3/17	Contig	University of Exeter	SAMN03281080	GCA_000817715.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/715/GCA_000817715.3_X621v3	26500625	X621
Achromobacter xylosoxidans	85698	PRJNA285410	285410	Proteobacteria	Betaproteobacteria	6.51055	67.8	-	LDVM01	777	6239	5714	8/31/15	4/4/17	Contig	University of Queensland	SAMN03753631	GCA_001276035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/035/GCA_001276035.1_ASM127603v1	-	A11
Streptococcus oralis	1303	PRJNA304333	304333	Terrabacteria group	Firmicutes	2.14885	41.6882	plasmid unnamed:NZ_CM003840.1/CM003840.1	LQZE01	230	2088	1719	3/2/16	4/5/17	Scaffold	University of Kaiserslautern	SAMN04325029	GCA_001579625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/625/GCA_001579625.1_ASM157962v1	27303717	DD17
Streptomyces griseus subsp. griseus	67263	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.15115	73.4	-	LLZL01	287	6299	6017	1/8/16	3/12/17	Contig	University of Illinois	SAMN03327495	GCA_001509565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/565/GCA_001509565.1_ASM150956v1	-	NRRL WC-3066
Acinetobacter nosocomialis	106654	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.95325	38.6	-	BBTU01	116	3882	3689	2/20/15	4/3/17	Contig	National Institute of Technology and Evaluation	SAMD00020342	GCA_000949675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/675/GCA_000949675.1_ASM94967v1	-	NBRC 110498
Klebsiella variicola	244366	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.64255	57.4	-	LFAD01	12	5560	5311	6/19/15	7/29/17	Scaffold	Broad Institute	SAMN03280391	GCA_001033575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/575/GCA_001033575.1_Kleb_pneu_MGH92_V1	-	MGH92
Bacillus atrophaeus ATCC 49822-2	743711	PRJNA46285	46285	Terrabacteria group	Firmicutes	4.12802	43.1	-	AEFW01	30	4212	4001	4/19/11	6/15/17	Contig	Transformational Medical Technologies Program	SAMN01816421	GCA_000204865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/865/GCA_000204865.2_ASM20486v2	21464989	ATCC 49822-2
Lactobacillus iners DSM 13335	525328	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.26766	32.5	-	AZET01	58	1227	1160	11/6/15	4/4/17	Contig	Shanghai Majorbio	SAMN02369401	GCA_001435015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/015/GCA_001435015.1_ASM143501v1	26415554	DSM 13335
Rhodococcus hoagii	43767	PRJNA316970	316970	Terrabacteria group	Actinobacteria	5.2664	68.7	-	LWTT01	41	4887	4791	4/17/17	6/6/17	Contig	The University of Edinburgh	SAMN04880524	GCA_002094295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/295/GCA_002094295.1_ASM209429v1	27638249	PAM2282
Acinetobacter radioresistens	40216	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.63639	42	-	DCRE01	125	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456428	GCA_002325085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/085/GCA_002325085.1_ASM232508v1	28894102	-
Staphylococcus warneri	1292	PRJNA316783	316783	Terrabacteria group	Firmicutes	2.57773	32.6	-	LWJN01	101	2535	2373	11/10/16	4/5/17	Contig	CSIR-Institute of Microbial Technology	SAMN04590062	GCA_001876385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/385/GCA_001876385.1_ASM187638v1	-	RE1.52
Staphylococcus capitis	29388	PRJEB9122	281726	Terrabacteria group	Firmicutes	2.50535	32.8	-	CVUF01	31	2424	2305	6/19/15	4/3/17	Contig	Department of Biosecurity PCL3	SAMEA3358846	GCA_001179785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/785/GCA_001179785.1_CR03	-	CR03
Staphylococcus hominis	1290	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.42279	31.4	-	LXRS01	98	2461	2331	6/7/16	4/5/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04941285	GCA_001658765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/765/GCA_001658765.1_ASM165876v1	-	LRKNS031
Lactobacillus paracasei subsp. paracasei Lpp120	1256223	PRJNA178452	178452	Terrabacteria group	Firmicutes	2.80129	46.5	-	ANMK01	201	2928	2683	6/11/13	4/1/17	Contig	Danone Research	SAMN02469723	GCA_000409935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/935/GCA_000409935.1_L.paracasei_Lpp120.v.1	23894338	Lpp120
Bifidobacterium pseudocatenulatum	28026	PRJNA272371	272371	Terrabacteria group	Actinobacteria	1.24379	56.7	-	LSUM01	13	1042	986	2/29/16	2/29/16	Contig	National University of Singapore	SAMN04497914	GCA_001576885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/885/GCA_001576885.1_ASM157688v1	-	-
Gardnerella vaginalis JCP8017A	1261062	PRJNA181317	181317	Terrabacteria group	Actinobacteria	1.60792	42.1	-	ATJN01	163	1441	1262	6/25/13	4/1/17	Scaffold	Washington University	SAMN02436912	GCA_000414605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/605/GCA_000414605.1_ASM41460v1	-	JCP8017A
Lactobacillus ruminis	1623	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.64588	43.3	-	DBPG01	129	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450716	GCA_002299385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/385/GCA_002299385.1_ASM229938v1	28894102	-
Lactobacillus jensenii	109790	PRJNA339464	339464	Terrabacteria group	Firmicutes	1.67523	34.2	-	MDTN01	69	1679	1475	9/22/16	4/5/17	Contig	CERELA-CONICET	SAMN05596977	GCA_001742045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/045/GCA_001742045.1_ASM174204v1	-	TL2937
Rothia mucilaginosa	43675	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.3371	59.5	-	JVLL01	224	1877	1739	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197517	GCA_001064575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/575/GCA_001064575.1_ASM106457v1	26230489	328_RMUC
Aggregatibacter actinomycetemcomitans serotype f str. SC29R	1440770	PRJNA232407	232407	Proteobacteria	Gammaproteobacteria	2.21139	44.2	-	AZTO01	227	2195	1990	3/23/16	4/5/17	Contig	"Bumgarner laboratory, Department of Microbiology, University of Washington"	SAMN04573015	GCA_001596305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/305/GCA_001596305.1_SC29Rv1.0	-	SC29R
Lactobacillus crispatus	47770	PRJNA290636	290636	Terrabacteria group	Firmicutes	2.10158	36.6	-	LJOM01	247	2200	1952	1/26/16	4/4/17	Contig	Vaginal Microbiome Consortium	SAMN03893605	GCA_001541535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/535/GCA_001541535.1_ASM154153v1	26747455	VMC7
Brachyspira hyodysenteriae	159	PRJNA272555	272555	Spirochaetes	Spirochaetia	3.02096	27	-	JXNK01	158	2622	2505	5/26/15	4/3/17	Scaffold	Murdoch University	SAMN03285453	GCA_001013075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/013/075/GCA_001013075.1_ASM101307v1	26098837	NSW15
Mycobacterium kansasii	1768	PRJNA317047	317047	Terrabacteria group	Actinobacteria	6.3583	66.2	-	LWCL01	140	5683	5334	4/27/16	4/5/17	Contig	University of Lodz	SAMN04599336	GCA_001632965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/965/GCA_001632965.1_Mkan_typeI_1.0	27257194	1010001495
Pectobacterium carotovorum subsp. odoriferum	78398	PRJNA259700	259700	Proteobacteria	Gammaproteobacteria	5.06621	51.6	-	JQOG01	156	4677	4408	9/15/14	4/2/17	Contig	Food and Environment Research Agency	SAMN03010636	GCA_000754765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/765/GCA_000754765.1_ASM75476v1	-	NCPPB 3839
Variovorax paradoxus ZNC0006	1339235	PRJNA205579	205579	Proteobacteria	Betaproteobacteria	8.47313	68.4	-	JROV01	4049	-	-	12/23/14	12/23/14	Contig	University of Oregon	SAMN03021514	GCA_000807585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/585/GCA_000807585.2_ZNC0006.1	-	ZNC0006
Streptococcus equinus	1335	PRJEB21850	395187	Terrabacteria group	Firmicutes	2.02131	37.4	-	FZRA01	16	2020	1953	7/29/17	8/7/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216470	GCA_900199575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/199/575/GCA_900199575.1_IMG-taxon_2654588192_annotated_assembly	-	AR3
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.64662	47.6	-	MDZS01	84	3364	3195	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320394	GCA_001882675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/675/GCA_001882675.1_ASM188267v1	-	91/4316
Escherichia albertii	208962	PRJDB3047	301492	Proteobacteria	Gammaproteobacteria	4.79687	49.5	-	BBVL01	102	4878	4514	11/6/15	2/25/17	Scaffold	University of Miyazaki	SAMD00026646	GCA_001514705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/705/GCA_001514705.1_ASM151470v1	26537224	NIAH_Bird_23
Lactobacillus sakei	1599	PRJNA343164	343164	Terrabacteria group	Firmicutes	1.9233	41.1	-	MKDJ01	32	1932	1837	2/1/17	4/10/17	Contig	ETH Zurich	SAMN05717733	GCA_001981945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/945/GCA_001981945.1_ASM198194v1	-	RI-412
Lactobacillus johnsonii	33959	PRJNA316010	316010	Terrabacteria group	Firmicutes	1.9011	34.4	-	NIBA01	69	1874	1674	8/25/17	8/28/17	Contig	University of Minnesota	SAMN04573174	GCA_002270005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/270/005/GCA_002270005.1_ASM227000v1	-	UMNLJ50
Rhodococcus erythropolis	1833	PRJNA284797	284797	Terrabacteria group	Actinobacteria	7.20453	62.3	-	LDPN01	108	6727	6496	6/5/15	4/3/17	Scaffold	Indian Institute of Technology Kharagpur	SAMN03733238	GCA_001020225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/225/GCA_001020225.1_ASM102022v1	-	CAS922i
Akkermansia muciniphila	239935	PRJEB21068	396410	PVC group	Verrucomicrobia	2.7438	55.6	-	FXXS01	25	2444	2346	7/29/17	8/7/17	Scaffold	"WAGENINGEN UNIVERSITY, LABORATORY OF SYSTEMS AND SYNTHETIC BIOLOGY."	SAMEA104102606	GCA_900185025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/025/GCA_900185025.1_MG2_JASPER.fasta	-	-
Clostridium butyricum DORA_1	1403941	PRJNA221486	221486	Terrabacteria group	Firmicutes	4.01416	28.5	-	AZLX01	224	3790	3790	12/16/13	12/16/13	Contig	"University of California, Berkeley"	SAMN02316559	GCA_000508465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/465/GCA_000508465.1_CloBut_DORA_1_velvet_1.1	-	-
Flavobacterium psychrophilum	96345	PRJNA262165	262165	FCB group	Bacteroidetes/Chlorobi group	2.51859	32.9	-	JRWE01	129	2249	2004	12/16/14	4/2/17	Contig	Washington State University	SAMN03081545	GCA_000801695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/695/GCA_000801695.1_ASM80169v1	26377311	TN
Basilea psittacipulmonis DSM 24701	1072685	PRJNA256137	256137	Proteobacteria	Betaproteobacteria	1.95907	40.3	chromosome:NZ_CP009238.1/CP009238.1	-	1	1720	1637	8/27/14	4/9/17	Complete Genome	Geneva University Hospitals	SAMN02940631	GCA_000743945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/945/GCA_000743945.1_ASM74394v1	24581117	DSM 24701
Finegoldia magna	1260	PRJNA383659	383659	Terrabacteria group	Firmicutes	1.91385	31.8	-	NDYG01	20	1847	1747	8/7/17	8/9/17	Contig	Aarhus University	SAMN06769904	GCA_002243215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/215/GCA_002243215.1_ASM224321v1	-	09T494
Campylobacter concisus	199	PRJNA280464	280464	Proteobacteria	delta/epsilon subdivisions	1.93773	37.7	-	NDYO01	30	2055	1918	6/4/17	6/6/17	Contig	Institute of Environmental Science and Research (ESR)	SAMN03457016	GCA_002165785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/785/GCA_002165785.1_ASM216578v1	-	Lasto28.99
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.77755	67.2	-	LOTK01	89	7050	6706	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449146	GCA_001522245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/245/GCA_001522245.1_ASM152224v1	-	RF23-BP93
Propionibacterium freudenreichii	1744	PRJEB6428	270192	Terrabacteria group	Actinobacteria	2.5835	67.4	-	CCYN01	41	2268	2153	12/11/14	4/4/17	Scaffold	INRA STLO	SAMEA2785467	GCA_900000035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/000/035/GCA_900000035.1_CIRM-BIA118	-	CIRM-BIA 118
Aeromonas hydrophila	644	PRJNA294992	294992	Proteobacteria	Gammaproteobacteria	4.78317	61.8	-	LJOE01	5	4369	4165	10/2/15	4/4/17	Scaffold	Tsinghua University	SAMN04038585	GCA_001306015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/015/GCA_001306015.1_ASM130601v1	26659690	KOR1
Pseudomonas stutzeri ATCC 14405 = CCUG 16156	32042	PRJNA74687	74687	Proteobacteria	Gammaproteobacteria	4.52559	61.4	-	AGSL01	130	4213	4015	12/13/11	5/19/17	Contig	University of Balearic Islands	SAMN02471579	GCA_000237885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/885/GCA_000237885.2_PseStu_1.0	22328767	CCUG 16156
Yersinia intermedia	631	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.91335	47.6	-	CHZI01	79	4537	4296	4/21/15	4/4/17	Scaffold	SC	SAMEA859883	GCA_001319645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/645/GCA_001319645.1_4821_8_6	-	IP10066
Paenibacillus polymyxa TD94	1333862	PRJNA202957	202957	Terrabacteria group	Firmicutes	5.9992	45.5	-	ASSA01	541	5390	4966	1/15/14	4/2/17	Contig	China Agricultural University	SAMN02597337	GCA_000520775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/775/GCA_000520775.1_std94	-	TD94
Bacillus coagulans	1398	PRJNA282439	282439	Terrabacteria group	Firmicutes	3.50142	46.2	-	LBMQ01	141	3489	3259	5/6/15	4/3/17	Contig	Nanjing Forest University	SAMN03570054	GCA_000988585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/585/GCA_000988585.1_ASM98858v1	26089419	NL01
Vibrio sp. J2-12	1507975	PRJEB5891	284697	Proteobacteria	Gammaproteobacteria	5.53828	44.5	-	CCKN01	155	4856	4740	5/20/15	4/10/17	Scaffold	STATION BIOLOGIQUE DE ROSCOFF	SAMEA2594001	GCA_001243825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/825/GCA_001243825.1_VRSK12v1_PRJEB5891	-	J2-12
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305	342451	PRJNA341407	341407	Terrabacteria group	Firmicutes	2.58267	33	-	MTGA01	39	2537	2373	2/13/17	4/8/17	Contig	California Department of Public Health	SAMN05721776	GCA_001997165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/165/GCA_001997165.1_ASM199716v1	-	ATCC 15305
Streptococcus sanguinis SK1059	888823	PRJNA53187	53187	Terrabacteria group	Firmicutes	2.42827	42.9	-	AFFM01	9	2400	2269	5/9/11	3/30/17	Scaffold	Baylor College of Medicine	SAMN00253969	GCA_000212795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/212/795/GCA_000212795.1_ASM21279v1	-	SK1059
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.22353	36.7	-	LPRI01	6	2332	2169	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305142	GCA_001560065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/065/GCA_001560065.1_GG12_C01_08	-	GG12-C01-08
Bacillus weihenstephanensis	86662	PRJNA318342	318342	Terrabacteria group	Firmicutes	5.82373	35.2	-	LXLV01	143	6087	5566	10/12/16	4/5/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04819587	GCA_001757995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/995/GCA_001757995.1_ASM175799v1	-	GOE10
Parabacteroides distasonis	823	PRJNA231221	231221	FCB group	Bacteroidetes/Chlorobi group	4.96335	45	-	NJFM01	7	4216	3627	6/23/17	6/23/17	Contig	US Food and Drug Administration 	SAMN06173357	GCA_002206325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/325/GCA_002206325.1_ASM220632v1	-	FDAARGOS_344
Bifidobacterium breve DPC 6330	1074482	PRJNA71589	71589	Terrabacteria group	Actinobacteria	2.38623	58.6	-	AFXX01	47	2164	1971	9/19/11	3/30/17	Contig	"Teagasc Food Research Centre, Moorepark, Fermoy, Co. Cork, Rep. Ireland"	SAMN02471030	GCA_000226175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/175/GCA_000226175.2_ASM22617v2	22072651	DPC 6330
Chlamydia muridarum str. Nigg 2 MCR	1460373	PRJNA237574	237574	PVC group	Chlamydiae	1.07295	40.3	chromosome:NZ_CP007276.1/CP007276.1	-	1	950	899	6/17/14	4/2/17	Complete Genome	Rutgers University	SAMN03081538	GCA_000709455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/455/GCA_000709455.1_ASM70945v1	24914180	Nigg 2 MCR
Moraxella catarrhalis	480	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	2.01574	45.3	-	JVMG01	44	1892	1781	7/10/15	4/3/17	Contig	University of Washington	SAMN03197496	GCA_001064405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/405/GCA_001064405.1_ASM106440v1	26230489	304_MCAT
Bacillus clausii	79880	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.36423	44.6	-	NPCB01	161	4335	4174	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372702	GCA_002272545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/545/GCA_002272545.1_assembly-7538_v1	-	7538
Lactobacillus salivarius	1624	PRJNA321782	321782	Terrabacteria group	Firmicutes	2.32671	33	-	LXZG01	166	2360	2154	5/12/17	5/23/17	Contig	Seoul National University	SAMN05003804	GCA_002135095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/095/GCA_002135095.1_ASM213509v1	-	KLW001
Streptomyces scabiei	1930	PRJNA293375	293375	Terrabacteria group	Actinobacteria	10.3174	71.2	-	NHOD01	1568	9450	8133	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06345842	GCA_002156075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/075/GCA_002156075.1_ASM215607v1	-	NRRL B-2795
Clostridium beijerinckii	1520	PRJNA322803	322803	Terrabacteria group	Firmicutes	5.78147	29.7	-	LZZC01	264	5142	4851	2/23/17	2/25/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05170524	GCA_002006445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/445/GCA_002006445.1_ASM200644v1	-	DSM 791
Klebsiella oxytoca	571	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.67625	57.1	-	LEUR01	5	5751	5482	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280221	GCA_001030745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/745/GCA_001030745.1_Kleb_oxyt_CHS222_V1	-	CHS222
Cronobacter sakazakii	28141	PRJNA251808	251808	Proteobacteria	Gammaproteobacteria	4.66789	56.7	-	JOLN01	198	4552	4281	10/9/15	4/4/17	Scaffold	"Nottingham Trent University, UK"	SAMN02840785	GCA_001309155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/155/GCA_001309155.1_ASM130915v1	26438044	690
Chlamydia muridarum str. Nigg3 CMUT3-5	1434770	PRJNA227769	227769	PVC group	Chlamydiae	1.07295	40.3	chromosome:NZ_CP006974.1/CP006974.1	-	1	951	900	1/27/14	4/3/17	Complete Genome	UTHSCSA	SAMN02402711	GCA_000830945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/945/GCA_000830945.1_ASM83094v1	24343644	Nigg3 CMUT3-5
Proteus mirabilis	584	PRJNA272095	272095	Proteobacteria	Gammaproteobacteria	3.89926	38.7	-	LSGS01	62	3593	3447	2/9/16	4/4/17	Scaffold	The Genome Institute at Washington University	SAMN03948578	GCA_001553525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/525/GCA_001553525.1_ASM155352v1	-	GED7834
Mycoplasma bovis	28903	PRJNA306895	306895	Terrabacteria group	Tenericutes	0.948204	29.3	-	LQDG01	75	823	733	1/4/17	4/6/17	Contig	"University of California, Davis"	SAMN04366502	GCA_001930055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/055/GCA_001930055.1_ASM193005v1	-	2223MB
Brucella ovis IntaBari-2009-88-3	1293912	PRJNA189524	189524	Proteobacteria	Alphaproteobacteria	3.23395	57.2	-	ATHH01	107	3345	2950	6/21/13	4/1/17	Contig	Broad Institute	SAMN01921145	GCA_000413515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/515/GCA_000413515.1_Bruc_ovis_IntaBari-2009-88-3_V1	-	IntaBari-2009-88-3
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.52538	32.6	-	CUHC01	99	2502	2394	3/31/15	3/26/17	Contig	SC	SAMEA1035157	GCA_001224545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/545/GCA_001224545.1_7068_7_6	-	625
Chlamydia muridarum str. Nigg CM972	1434773	PRJNA227769	227769	PVC group	Chlamydiae	1.07295	40.3	chromosome:NZ_CP006975.1/CP006975.1	-	1	952	900	1/27/14	4/3/17	Complete Genome	UTHSCSA	SAMN02402771	GCA_000830965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/965/GCA_000830965.1_ASM83096v1	"1,673,572,424,343,640"	CM972
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.86548	67.3	-	LOWQ01	89	6216	5893	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449238	GCA_001524005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/005/GCA_001524005.1_ASM152400v1	-	FL-5-1-10-S1-D0
Thermococcus paralvinellae	582419	PRJNA230233	230233	Euryarchaeota	Thermococci	1.95774	40.3	chromosome:NZ_CP006965.1/CP006965.1	-	1	2147	2055	1/10/14	9/19/17	Complete Genome	Kyung Hee University	SAMN03081513	GCA_000517445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/445/GCA_000517445.1_ASM51744v1	25082851	ES1
Pasteurella multocida subsp. multocida str. 3480	584721	PRJNA32177	32177	Proteobacteria	Gammaproteobacteria	2.37813	40.3	chromosome:NC_017764.1/CP001409.1	-	1	2265	2127	4/24/12	3/30/17	Complete Genome	"Laboratory for Genomics and Bioinformatics, University of Oklahoma Health Sciences Center"	SAMN02603505	GCA_000259545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/545/GCA_000259545.1_ASM25954v1	-	3480
Mycoplasma gallisepticum	2096	PRJNA325637	325637	Terrabacteria group	Tenericutes	0.943776	31.5	-	MAFV01	90	792	669	6/24/16	4/5/17	Contig	University of Georgia	SAMN05253240	GCA_001676515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/515/GCA_001676515.1_ASM167651v1	-	K5322C
Lactobacillus brevis EW	1350467	PRJNA209593	209593	Terrabacteria group	Firmicutes	2.8851	45.3	-	AUTD01	38	2900	2768	10/18/13	4/2/17	Contig	"Seoul National University, South Korea"	SAMN02470900	GCA_000474675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/675/GCA_000474675.1_Lactobacillus_brevis_EW_genome_Assembly	24265492	EW
Mannheimia haemolytica serotype A2 str. OVINE	669261	PRJNA40171	40171	Proteobacteria	Gammaproteobacteria	2.5842	41.1	-	ACZX01	144	2662	2494	10/14/09	3/30/17	Contig	Washington State University	SAMN02436663	GCA_000176255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/255/GCA_000176255.1_ASM17625v1	19966002	OVINE
Pseudothermotoga thermarum DSM 5069	688269	PRJNA41517	41517	Thermotogae	Thermotogae	2.03994	40.3	chromosome:NC_015707.1/CP002351.1	-	1	2069	1966	6/10/11	9/3/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02232059	GCA_000217815.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/815/GCA_000217815.1_ASM21781v1	-	DSM 5069
Pseudoalteromonas espejiana DSM 9414	1314869	PRJNA196117	196117	Proteobacteria	Gammaproteobacteria	4.50045	40.2961	chromosome I:NZ_CP011028.1/CP011028.1; chromosome II:NZ_CP011029.1/CP011029.1	-	2	4071	3893	7/19/17	7/21/17	Complete Genome	Shandong University	SAMN03380224	GCA_002221525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/525/GCA_002221525.1_ASM222152v1	-	ATCC 29659
Bartonella henselae	38323	PRJNA295147	295147	Proteobacteria	Alphaproteobacteria	1.83841	37.9	-	LOAB01	64	1681	1454	1/4/17	4/10/17	Contig	Anses UMR BIPAR	SAMN04286623	GCA_001932145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/145/GCA_001932145.1_ASM193214v1	-	A112
Lactobacillus acidophilus	1579	PRJNA317797	317797	Terrabacteria group	Firmicutes	1.95169	34.6	-	LWSH01	74	1975	1835	4/29/16	4/5/17	Contig	Nanjing Agricultural University	SAMN04628015	GCA_001639165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/165/GCA_001639165.1_ASM163916v1	-	WG-LB-IV
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.15721	39.9	-	FPLW01	2	1056	962	5/10/17	5/24/17	Contig	WTSI	SAMEA1094333	GCA_900118735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/735/GCA_900118735.1_7067_6_66	-	10DC86
Leuconostoc mesenteroides subsp. dextranicum	33966	PRJNA280507	280507	Terrabacteria group	Firmicutes	2.00792	37.6	-	LAYN01	63	2078	1894	7/21/15	4/3/17	Contig	University of Verona	SAMN03463642	GCA_001184245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/245/GCA_001184245.1_ASM118424v1	26358600	LbE15
Anaplasma phagocytophilum str. ApNYW	1359154	PRJNA212468	212468	Proteobacteria	Alphaproteobacteria	1.50309	41.6	-	LAOG01	16	1217	1064	3/27/15	4/3/17	Contig	IGS	SAMN02665667	GCA_000964985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/985/GCA_000964985.1_ASM96498v1	-	ApNYW
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.04946	41.5	-	JJQA01	124	3479	3295	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708932	GCA_000979105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/105/GCA_000979105.1_gtlEnvA5udCFS	25756680	1.F.A.1A.3
Pseudoalteromonas sp. SM9913	234831	PRJNA39311	39311	Proteobacteria	Gammaproteobacteria	4.03767	40.2953	chromosome I:NC_014803.1/CP001796.1; chromosome II:NC_014800.1/CP001797.1	-	2	3677	3518	12/14/10	4/17/17	Complete Genome	ShanDong University	SAMN02603856	GCA_000184065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/184/065/GCA_000184065.1_ASM18406v1	20703316	-
Lactobacillus gasseri	1596	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.05058	34.9	-	JUKW01	81	2006	1884	7/10/15	4/3/17	Contig	University of Washington	SAMN03198208	GCA_001068345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/345/GCA_001068345.1_ASM106834v1	26230489	987_LJOH
Yersinia enterocolitica	630	PRJNA240089	240089	Proteobacteria	Gammaproteobacteria	4.68539	47.2542	chromosome:NZ_CP009846.1/CP009846.1; plasmid pYV:NZ_CP009845.1/CP009845.1	-	2	4441	4162	2/9/15	3/25/17	Chromosome	Los Alamos National Laboratory	SAMN03160540	GCA_000834795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/795/GCA_000834795.1_ASM83479v1	25931590	8081
Pseudoalteromonas issachenkonii	152297	PRJNA196215	196215	Proteobacteria	Gammaproteobacteria	4.13262	40.2765	chromosome I:NZ_CP011030.1/CP011030.1; chromosome II:NZ_CP011031.1/CP011031.1	-	2	3762	3573	9/18/17	9/20/17	Complete Genome	Shandong University	SAMN03380225	GCA_002310795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/795/GCA_002310795.1_ASM231079v1	-	KMM 3549
Streptococcus gordonii	1302	PRJNA280677	280677	Terrabacteria group	Firmicutes	2.16695	40.5	-	LAWL01	45	2094	1995	3/11/16	4/5/17	Contig	University of Malaya	SAMN03480687	GCA_001588955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/955/GCA_001588955.1_ASM158895v1	-	M99
[Haemophilus] ducreyi	730	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	1.53471	37.7	-	MUYD01	19	1505	1365	3/3/17	3/6/17	Scaffold	TAILORED-Treatment project	SAMN06308731	GCA_002015155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/155/GCA_002015155.1_ASM201515v1	-	CCUG 4438
Pseudoalteromonas issachenkonii	152297	PRJNA304356	304356	Proteobacteria	Gammaproteobacteria	4.13154	40.2764	chromosome I:NZ_CP013350.1/CP013350.1; chromosome II:NZ_CP013351.1/CP013351.1	-	2	3765	3555	12/2/15	4/16/17	Complete Genome	Korea Research Institute of Bioscience and Biotechnology	SAMN04299559	GCA_001455325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/325/GCA_001455325.1_ASM145532v1	-	KCTC 12958
Mesorhizobium loti	381	PRJNA322740	322740	Proteobacteria	Alphaproteobacteria	7.18299	62.9	-	LYTL01	29	7147	6801	6/20/16	4/5/17	Contig	Curtin University	SAMN05172977	GCA_001672385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/385/GCA_001672385.1_SU343	-	SU343
Pseudoalteromonas tetraodonis	43659	PRJNA196225	196225	Proteobacteria	Gammaproteobacteria	4.1284	40.2763	chromosome I:NZ_CP011041.1/CP011041.1; chromosome II:NZ_CP011042.1/CP011042.1	-	2	3785	3584	9/18/17	9/20/17	Complete Genome	Shandong University	SAMN03380228	GCA_002310835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/835/GCA_002310835.1_ASM231083v1	-	GFC
Bordetella bronchiseptica 980	1458256	PRJNA237081	237081	Proteobacteria	Betaproteobacteria	5.26009	68.2	-	JGWM01	186	5111	4817	5/1/14	4/2/17	Contig	JCVI	SAMN02614571	GCA_000662115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/115/GCA_000662115.1_gbb59v01	25908122	980
Treponema denticola SP23	999435	PRJNA64921	64921	Spirochaetes	Spirochaetia	2.826	37.9	-	AHAB01	3	2712	2583	6/19/13	4/1/17	Scaffold	Broad Institute	SAMN02596779	GCA_000413115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/115/GCA_000413115.1_Trep_dent_SP23_F0463_V1	-	SP23
Bacteroides uniformis	820	PRJNA377666	377666	FCB group	Bacteroidetes/Chlorobi group	4.5801	46.4	-	NFHS01	33	3777	3637	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473745	GCA_002161435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/435/GCA_002161435.1_ASM216143v1	-	An67
Bacteroides ovatus	28116	PRJEB16557	349835	FCB group	Bacteroidetes/Chlorobi group	6.37393	41.9	-	FNQD01	60	4908	4738	10/22/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444282	GCA_900107475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/475/GCA_900107475.1_IMG-taxon_2693429857_annotated_assembly	-	DSM 1896
Chlamydia muridarum str. Nigg	243161	PRJNA229	229	PVC group	Chlamydiae	1.08045	40.2681	chromosome:NC_002620.2/AE002160.2; plasmid pMoPn:NC_002182.1/AE002162.1	-	2	960	908	3/1/00	3/29/17	Complete Genome	TIGR	SAMN02603994	GCA_000006685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/006/685/GCA_000006685.1_ASM668v1	10684935	Nigg
Clostridium sporogenes	1509	PRJNA278445	278445	Terrabacteria group	Firmicutes	3.92696	28	-	LFVV01	48	3762	3475	11/17/15	4/4/17	Contig	Illinois Institute of Technology	SAMN03418480	GCA_001444635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/635/GCA_001444635.1_UW_1k_1.0	26519392	PA 3679
Bacillus megaterium	1404	PRJNA356447	356447	Terrabacteria group	Firmicutes	5.97441	37.5	-	MRUF01	87	6176	5755	1/5/17	4/6/17	Contig	"California State University, Fresno"	SAMN06114098	GCA_001937775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/775/GCA_001937775.1_ASM193777v1	-	MRML4
Enterococcus casseliflavus	37734	PRJEB8303	276433	Terrabacteria group	Firmicutes	3.0025	43.3	-	CDRD01	2662	-	-	2/24/15	2/24/15	Contig	CGS-GL	SAMEA3218005	GCA_000935925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/925/GCA_000935925.1_3h10B_assembly	-	3h10B
Pasteurella multocida subsp. multocida str. HN06	1132496	PRJNA80883	80883	Proteobacteria	Gammaproteobacteria	2.40758	40.2163	chromosome:NC_017027.1/CP003313.1; plasmid unnamed:NC_017035.1/CP003314.1	-	2	2323	2208	3/23/12	3/30/17	Complete Genome	Huazhong Agricultural University	SAMN02603325	GCA_000255915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/915/GCA_000255915.1_ASM25591v1	22628516	HN06
Vibrio splendidus 12E03	1191305	PRJNA167010	167010	Proteobacteria	Gammaproteobacteria	5.36911	44.3	-	AJZD02	360	4799	4586	6/25/12	4/5/17	Scaffold	Broad Institute	SAMN02470443	GCA_000272105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/105/GCA_000272105.2_ASM27210v2	22955834	1.20E+04
Leptospira borgpetersenii serovar Hardjo-bovis str. JB197	355277	PRJNA16148	16148	Spirochaetes	Spirochaetia	3.87623	40.2155	chromosome 1:NC_008510.1/CP000350.1; chromosome 2:NC_008511.1/CP000351.1	-	2	3770	3222	10/13/06	3/29/17	Complete Genome	Monash University	SAMN02603616	GCA_000013965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/965/GCA_000013965.1_ASM1396v1	16973745	JB197
Lactobacillus rhamnosus LMS2-1	525361	PRJNA31497	31497	Terrabacteria group	Firmicutes	3.1594	46.5	-	ACIZ01	55	3139	2951	3/16/09	6/15/17	Scaffold	Baylor College of Medicine	SAMN00001479	GCA_000160175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/175/GCA_000160175.1_ASM16017v1	-	LMS2-1
Leptospira borgpetersenii serovar Ballum	280505	PRJNA287732	287732	Spirochaetes	Spirochaetia	4.03758	40.2056	chromosome 1:NZ_CP012029.1/CP012029.1; chromosome 2:NZ_CP012030.1/CP012030.1; plasmid lbp1:NZ_CP012031.1/CP012031.1; plasmid lbp2:NZ_CP012032.1/CP012032.1	-	4	3917	3466	11/17/15	4/10/17	Complete Genome	Shanghai Jiao Tong University School of Medicine	SAMN03785545	GCA_001444465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/465/GCA_001444465.1_ASM144446v1	26555137	56604
Haemophilus parasuis str. Nagasaki	1117322	PRJNA77723	77723	Proteobacteria	Gammaproteobacteria	2.31985	40	-	ANKT01	47	2379	2117	3/26/14	4/2/17	Contig	CRESA_UAB	SAMN02952939	GCA_000600995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/995/GCA_000600995.1_ASM60099v1	24951673	Nagasaki
Helicobacter pullorum	35818	PRJNA251884	251884	Proteobacteria	delta/epsilon subdivisions	1.6918	34.6	-	JNOB01	60	1683	1612	9/24/15	4/4/17	Scaffold	"National Institute of Health, Portugal"	SAMN02841082	GCA_001298065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/065/GCA_001298065.1_ASM129806v1	-	229313/12
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15161	41.2	-	CWEG01	89	2093	1914	6/24/15	3/26/17	Contig	SC	SAMEA1032751	GCA_001175045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/045/GCA_001175045.1_6903_7_40	-	EQUI0185
Micrococcus luteus Mu201	1255578	PRJEB19175	374433	Terrabacteria group	Actinobacteria	2.49263	73	-	FUKT01	114	2356	2207	2/11/17	5/31/17	Contig	MICALIS	SAMEA81152668	GCA_900163885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/885/GCA_900163885.1_ASM90016388v1	-	Mu201
Alteromonas macleodii	28108	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	4.34155	44.5	-	LUNK01	102	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534560	GCA_001626275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/275/GCA_001626275.1_ASM162627v1	27377622	-
Bifidobacterium bifidum	1681	PRJNA263318	263318	Terrabacteria group	Actinobacteria	2.17888	62.6	-	JSDX01	22	1863	1682	6/5/15	4/3/17	Contig	University of Parma	SAMN03097402	GCA_001020265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/265/GCA_001020265.1_Bbif05v4	25523018	IPLA 20017
Yersinia kristensenii	28152	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.85296	47.3	-	NHOG01	61	4574	4389	6/9/17	6/12/17	Scaffold	FDA/CFSAN	SAMN06330405	GCA_002188915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/915/GCA_002188915.1_ASM218891v1	-	CFSAN060538
Yersinia frederiksenii	29484	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.7274	47.6	-	CPZP01	58	4237	4066	3/23/15	4/3/17	Scaffold	SC	SAMEA859881	GCA_001151185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/185/GCA_001151185.1_4821_8_8	-	IP23698
Bacillus mycoides	1405	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.957	35.1	-	MUAR01	228	6287	5847	3/3/17	3/6/17	Contig	Cornell University	SAMN05660113	GCA_002014715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/715/GCA_002014715.1_ASM201471v1	-	FSL H7-0683
Comamonas testosteroni	285	PRJNA218483	218483	Proteobacteria	Betaproteobacteria	5.68428	61.1	-	AWTM01	152	5296	5045	10/1/14	4/2/17	Contig	Huazhong Agricultural University	SAMN03085422	GCA_000761375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/375/GCA_000761375.1_CDS1v1	-	DS1
Stenotrophomonas maltophilia WJ66	1427375	PRJNA229185	229185	Proteobacteria	Gammaproteobacteria	4.65728	66.4	-	AZRF01	75	4321	4103	2/18/15	3/25/17	Scaffold	"The Institute of Microbiology and Epidemiology,Academy of Military Medical Science"	SAMN03334939	GCA_000877275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/275/GCA_000877275.1_ASM87727v1	25654114	WJ66
Capnocytophaga leadbetteri	327575	PRJNA369395	369395	FCB group	Bacteroidetes/Chlorobi group	2.50402	40.2	chromosome:NZ_CP022384.1/CP022384.1	-	1	2249	2132	9/14/17	9/16/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06289149	GCA_002302615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/615/GCA_002302615.1_ASM230261v1	-	H6253
Candidatus Nanopelagicus abundans	1884916	PRJNA327031	327031	Terrabacteria group	Actinobacteria	1.16186	40.2	chromosome:NZ_CP016779.1/CP016779.1	-	1	1205	1153	9/8/17	10/2/17	Complete Genome	University of Zurich	SAMN05296518	GCA_002288305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/305/GCA_002288305.1_ASM228830v1	-	-
Chlamydia psittaci Cal10	984894	PRJNA62891	62891	PVC group	Chlamydiae	1.17684	39	-	AEZD01	4	1046	981	4/13/11	3/30/17	Scaffold	"Institute for Genome Sciences, University Of Maryland School of Medicine"	SAMN02435899	GCA_000204175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/175/GCA_000204175.1_ASM20417v1	21622741	Cal10
Actinobacillus suis	716	PRJEB6403	251923	Proteobacteria	Gammaproteobacteria	2.50196	40.2	chromosome 1:NZ_LT906456.1/LT906456.1	-	1	2337	2231	8/15/17	8/28/17	Complete Genome	SC	SAMEA4504061	GCA_900187155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/155/GCA_900187155.1_51726_C01	-	NCTC12996
Neisseria gonorrhoeae 1291	528345	PRJNA32783	32783	Proteobacteria	Betaproteobacteria	2.11171	52.5	-	ABZF01	42	2340	2071	12/15/08	4/11/17	Scaffold	Broad Institute	SAMN02595238	GCA_000156755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/755/GCA_000156755.1_ASM15675v1	-	1291
Streptococcus mutans TCI-138	1074121	PRJNA71993	71993	Terrabacteria group	Firmicutes	1.80508	37	-	AGKN01	131	1834	1727	10/6/11	3/22/17	Contig	JCVI	SAMN02436445	GCA_000228905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/905/GCA_000228905.2_SMUT4-NEX_10-138	-	TCI-138
Borrelia garinii IPT88	1408828	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.19517	27.8	-	AYAD01	270	1140	546	12/3/13	4/2/17	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378795	GCA_000501655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/655/GCA_000501655.1_BorGarIPT88	-	IPT88
Streptococcus dysgalactiae subsp. equisimilis	119602	PRJNA327242	327242	Terrabacteria group	Firmicutes	2.17431	39.2	-	MATW01	72	2204	2036	7/9/16	4/5/17	Contig	The UT MD Anderson Cancer Center	SAMN05327338	GCA_001682735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/735/GCA_001682735.1_ASM168273v1	-	UT_4231_KK
Methanobrevibacter smithii TS95A	911129	PRJNA59675	59675	Euryarchaeota	Methanobacteria	1.99216	30.2	-	AELX01	56	1883	1654	2/17/11	3/30/17	Contig	Washington University in St.Louis	SAMN02436676	GCA_000190055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/055/GCA_000190055.2_ASM19005v2	21317366	TS95A
Microcystis aeruginosa DIANCHI905	1235808	PRJNA175932	175932	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.85887	42.5	-	AOCI01	335	4874	4303	1/22/13	4/1/17	Contig	"Institute of Hydrobiology, Chinese Academy of Sciences"	SAMN02469975	GCA_000332585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/585/GCA_000332585.1_MicAerD1.0	-	DIANCHI905
Bradyrhizobium japonicum CCBAU 15618	1128255	PRJNA77219	77219	Proteobacteria	Alphaproteobacteria	9.82401	63.4	-	AJPZ01	691	9846	8828	5/3/12	5/18/17	Contig	China Agricultural University	SAMN02469476	GCA_000261585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/585/GCA_000261585.1_15618	22586130	CCBAU 15618
Streptococcus salivarius	1304	PRJNA264747	264747	Terrabacteria group	Firmicutes	2.10827	40.2	chromosome:NZ_CP015282.1/CP015282.1	-	1	1968	1829	4/18/17	4/21/17	Complete Genome	Illinois Institute of Technology	SAMN03140396	GCA_002094955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/955/GCA_002094955.1_ASM209495v1	-	ATCC 27945
Brucella suis 019	1171378	PRJNA308608	308608	Proteobacteria	Alphaproteobacteria	3.30282	57.2365	chromosome 1:NZ_CP013963.1/CP013963.1; chromosome 2:NZ_CP013964.1/CP013964.1	-	2	3347	3154	1/15/16	4/5/17	Chromosome	Nankai University	SAMN04404261	GCA_001594165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/165/GCA_001594165.1_ASM159416v1	-	19
Brucella canis F7/05A	1198699	PRJNA176539	176539	Proteobacteria	Alphaproteobacteria	3.21706	57.2	-	AQNA01	3	3272	3071	4/17/13	4/1/17	Contig	Broad Institute	SAMN01047750	GCA_000367305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/305/GCA_000367305.1_Bruc_cani_F7_05A_V1	-	F7/05A
Clavibacter michiganensis subsp. michiganensis	33013	PRJNA331197	331197	Terrabacteria group	Actinobacteria	3.19595	72.4	-	MDHF01	313	3158	2756	5/19/17	5/24/17	Contig	University of California	SAMN05439584	GCA_002151055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/055/GCA_002151055.1_ASM215105v1	-	CASJ005
Rhizobium leguminosarum bv. viciae 128C53	1041141	PRJNA169734	169734	Proteobacteria	Alphaproteobacteria	7.60923	60.6	-	ARDW01	72	7456	7070	4/19/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02441035	GCA_000373425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/425/GCA_000373425.1_ASM37342v1	-	128C53
Treponema pallidum subsp. pallidum	161	PRJNA271237	271237	Spirochaetes	Spirochaetia	1.13964	52.8	chromosome:NZ_CP010561.1/CP010561.1	-	1	1067	1004	6/3/16	4/5/17	Chromosome	University of Washington	SAMN03273362	GCA_001655355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/355/GCA_001655355.1_ASM165535v1	-	Nichols Houston
Borrelia burgdorferi 29805	498738	PRJNA28621	28621	Spirochaetes	Spirochaetia	1.3442	28.3288	plasmid 29805_cp26:NC_012513.1/CP001550.1; plasmid 29805_cp32-12:NC_012516.1/CP001545.1; plasmid 29805_cp32-4:NC_012511.1/CP001556.1; plasmid 29805_cp32-5:NC_012517.1/CP001546.1; plasmid 29805_cp32-7:NC_012514.1/CP001558.1; plasmid 29805_cp32-9:NC_012510.1/CP001549.1; plasmid 29805_lp17:NC_012500.1/CP001551.1; plasmid 29805_lp25:NC_012503.1/CP001553.1; plasmid 29805_lp28-2:NC_012502.1/CP001559.1; plasmid 29805_lp28-3:NC_012507.1/CP001547.1; plasmid 29805_lp28-4:NC_012501.1/CP001552.1; plasmid 29805_lp28-6:NC_012495.1/CP001555.1; plasmid 29805_lp36:NC_012498.1/CP001557.1; plasmid 29805_lp38:NC_012508.1/CP001548.1; plasmid 29805_lp54:NC_012505.1/CP001554.1	ABJX02	53	1383	1219	2/6/08	3/30/17	Contig	J. Craig Venter Institute	SAMN02436321	GCA_000172295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/295/GCA_000172295.2_ASM17229v2	-	29805
Burkholderia multivorans R-20526	1449334	PRJNA234537	234537	Proteobacteria	Betaproteobacteria	6.44283	67	-	JPZC01	192	6174	5847	8/17/15	4/4/17	Contig	LM-UGent	SAMN02983075	GCA_001267755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/755/GCA_001267755.1_ASM126775v1	-	R-20526
Streptococcus salivarius	1304	PRJNA308383	308383	Terrabacteria group	Firmicutes	2.19104	40.2	chromosome:NZ_CP014144.1/CP014144.1	-	1	2100	1922	2/1/16	4/4/17	Complete Genome	Xintai People Hospital	SAMN04395122	GCA_001543085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/085/GCA_001543085.1_ASM154308v1	-	JF
Streptococcus salivarius	1304	PRJNA196127	196127	Terrabacteria group	Firmicutes	2.10099	40.2	chromosome:NZ_CP013216.1/CP013216.1	-	1	1983	1853	12/7/15	4/4/17	Complete Genome	Top Institute Food and Nutrition (TIFN)	SAMN02471219	GCA_000448685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/685/GCA_000448685.2_ASM44868v2	26847886	HSISS4
Aliivibrio fischeri	668	PRJNA283549	283549	Proteobacteria	Gammaproteobacteria	4.21861	38.2	-	LCYF01	40	3933	3794	6/17/15	4/3/17	Scaffold	University of New Hampshire	SAMN03652539	GCA_001029395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/395/GCA_001029395.1_ASM102939v1	-	VCW2E2
Streptococcus mitis	28037	PRJNA270122	270122	Terrabacteria group	Firmicutes	1.90634	40.2	chromosome:NZ_CP012646.1/CP012646.1	-	1	1934	1792	9/11/15	4/4/17	Complete Genome	Chosun University	SAMN03263069	GCA_001281025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/025/GCA_001281025.1_ASM128102v1	-	KCOM 1350 (= ChDC B183)
Porphyromonas gingivalis SJD11	1297566	PRJNA205616	205616	FCB group	Bacteroidetes/Chlorobi group	2.29809	48.4	-	ASYO01	156	2034	1866	6/23/17	6/26/17	Scaffold	Shanghai Jiao Tong University School of Medicine	SAMN07255459	GCA_002206105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/105/GCA_002206105.1_SJD11	-	SJD11
Actinobacillus suis ATCC 33415	743972	PRJNA46463	46463	Proteobacteria	Gammaproteobacteria	2.5016	40.2	chromosome:NZ_CP009159.1/CP009159.1	-	1	2342	2225	8/14/14	4/9/17	Complete Genome	University of Missouri	SAMN01918029	GCA_000739435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/435/GCA_000739435.1_ASM73943v1	25237027	ATCC 33415
Lactobacillus fermentum	1613	PRJNA276297	276297	Terrabacteria group	Firmicutes	2.1998	51.5	-	LAIK01	36	2089	1863	3/31/15	4/3/17	Scaffold	Quorum Innovations	SAMN03372370	GCA_000966835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/835/GCA_000966835.1_ASM96683v1	25977424	LfQi6
Sulfolobus islandicus M.16.12	1132498	PRJNA80891	80891	TACK group	Crenarchaeota	2.68081	35.2	-	AHJL01	5	2956	2604	1/25/12	3/30/17	Contig	University of Illinois	SAMN02471807	GCA_000245115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/115/GCA_000245115.2_ASM24511v2	22363207	M.16.12
Lactococcus garvieae	1363	PRJEB7069	264507	Terrabacteria group	Firmicutes	2.2537	37.7	-	CCXC01	13	2314	2130	10/21/14	4/2/17	Contig	URMITE	SAMEA2766081	GCA_000820425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/425/GCA_000820425.1_PRJEB6736_assembly_1	-	M14
Bifidobacterium adolescentis	1680	PRJNA300965	300965	Terrabacteria group	Actinobacteria	2.09491	59.4	-	LNKG01	8	1748	1632	4/24/17	4/26/17	Contig	University of Parma	SAMN04231313	GCA_002107975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/975/GCA_002107975.1_BadoAL124v1	27035119	AL12-4
Vibrio harveyi	669	PRJNA257174	257174	Proteobacteria	Gammaproteobacteria	6.09562	44.9	-	JPTR01	1338	5797	5231	7/22/15	4/3/17	Contig	Naval Research Laboratory	SAMN02948028	GCA_001185455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/455/GCA_001185455.1_ASM118545v1	-	CAIM606
Lactobacillus helveticus	1587	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.77178	36.6	-	JQCJ01	267	1769	1497	11/6/15	4/4/17	Scaffold	Shanghai Majorbio	SAMN02797793	GCA_001437535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/535/GCA_001437535.1_ASM143753v1	26415554	LMG 22464
Salinispora arenicola CNT859	1169163	PRJNA178042	178042	Terrabacteria group	Actinobacteria	5.82249	69.4	-	ARIQ01	74	5338	4994	4/22/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02440459	GCA_000377605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/605/GCA_000377605.1_ASM37760v1	-	CNT859
Lactobacillus casei A2-362	1051653	PRJNA68465	68465	Terrabacteria group	Firmicutes	3.36127	46.1	-	AFYM01	167	3709	3164	11/2/12	3/30/17	Contig	University of Wisconsin-Madison and Utah State University	SAMN02472007	GCA_000309625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/625/GCA_000309625.1_ASM30962v1	23035691	A2-362
Coxiella burnetii	777	PRJNA394747	394747	Proteobacteria	Gammaproteobacteria	2.0065	42.5	-	NOLO01	33	2194	1993	8/11/17	8/15/17	Scaffold	National Institutes of Health	SAMN07349494	GCA_002247205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/205/GCA_002247205.1_ASM224720v1	-	Turkey RSA315
Owenweeksia hongkongensis DSM 17368	926562	PRJNA65297	65297	FCB group	Bacteroidetes/Chlorobi group	4.00006	40.2	chromosome:NC_016599.1/CP003156.1	-	1	3538	3462	12/5/11	4/17/17	Complete Genome	JGI	SAMN02261417	GCA_000236705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/705/GCA_000236705.1_ASM23670v1	23450211	DSM 17368
Thermococcus sibiricus MM 739	604354	PRJNA34531	34531	Euryarchaeota	Thermococci	1.8458	40.2	chromosome:NC_012883.1/CP001463.1	-	1	2018	1913	6/29/09	4/6/17	Complete Genome	Centre	SAMN02603090	GCA_000022545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/545/GCA_000022545.1_ASM2254v1	19447963	MM 739
Aeromonas salmonicida subsp. masoucida NBRC 13784	1216980	PRJDB242	171910	Proteobacteria	Gammaproteobacteria	4.50226	58.8	-	BAWQ01	227	4193	3815	4/16/14	4/2/17	Contig	National Institute of Technology and Evaluation	SAMD00000014	GCA_000647955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/955/GCA_000647955.1_ASM64795v1	-	NBRC 13784
Streptococcus mitis SK616	1095735	PRJNA75129	75129	Terrabacteria group	Firmicutes	1.98692	39.8	-	AICR01	126	1964	1823	4/5/12	3/30/17	Contig	J. Craig Venter Institute	SAMN00761793	GCA_000257805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/805/GCA_000257805.1_ASM25780v1	-	SK616
Oenococcus oeni	1247	PRJNA245799	245799	Terrabacteria group	Firmicutes	1.78615	37.9	-	JMIS01	20	1855	1678	6/2/14	3/24/17	Contig	Consiglio per la Ricerca e la Sperimentazione in Agricoltura	SAMN02739850	GCA_000697625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/697/625/GCA_000697625.1_Oeni1	24994801	OM27
Leptospira borgpetersenii serovar Hardjo-bovis str. L550	355276	PRJNA16146	16146	Spirochaetes	Spirochaetia	3.93178	40.2	chromosome 1:NC_008508.1/CP000348.1; chromosome 2:NC_008509.1/CP000349.1	-	2	3847	3288	10/13/06	3/29/17	Complete Genome	Monash University	SAMN02603615	GCA_000013945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/945/GCA_000013945.1_ASM1394v1	16973745	L550
Campylobacter fetus subsp. fetus	32019	PRJEB8721	292173	Proteobacteria	delta/epsilon subdivisions	1.75248	34	-	FAVD01	17	1846	1736	11/29/15	4/4/17	Contig	SC	SAMEA3403190	GCA_001486785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/486/785/GCA_001486785.1_17059_2_2	-	006A-0193
Crinalium epipsammum PCC 9333	1173022	PRJNA158835	158835	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.62041	40.1979	chromosome:NC_019753.1/CP003620.1; plasmid pCRI9333.01:NC_019733.1/CP003621.1; plasmid pCRI9333.02:NC_019734.1/CP003622.1; plasmid pCRI9333.03:NC_019754.1/CP003623.1; plasmid pCRI9333.04:NC_019735.1/CP003624.1; plasmid pCRI9333.05:NC_019736.1/CP003625.1; plasmid pCRI9333.06:NC_019755.1/CP003626.1; plasmid pCRI9333.07:NC_019737.1/CP003627.1; plasmid pCRI9333.08:NC_019756.1/CP003628.1	-	9	4962	4728	12/6/12	4/17/17	Complete Genome	JGI	SAMN02261349	GCA_000317495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/495/GCA_000317495.1_ASM31749v1	-	PCC 9333
Bartonella bacilliformis	774	PRJNA308542	308542	Proteobacteria	Alphaproteobacteria	1.40101	38.2	-	LQWW01	15	1249	1146	4/21/16	4/5/17	Contig	IrsiCaixa Foundation	SAMN04396912	GCA_001625425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/625/425/GCA_001625425.1_ASM162542v1	-	USM-LMMB 06
Leptospira borgpetersenii str. Noumea 25	1049781	PRJNA74143	74143	Spirochaetes	Spirochaetia	3.95786	40	-	AHOD02	108	3932	3108	1/24/12	4/10/17	Contig	J. Craig Venter Institute	SAMN00739251	GCA_000244535.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/535/GCA_000244535.3_gls454137v02	-	Noumea 25
Pseudoalteromonas nigrifaciens	28109	PRJNA196219	196219	Proteobacteria	Gammaproteobacteria	4.27478	40.177	chromosome I:NZ_CP011036.1/CP011036.1; chromosome II:NZ_CP011037.1/CP011037.1; plasmid unnamed:NZ_CP011038.1/CP011038.1	-	3	3972	3710	7/19/17	7/21/17	Complete Genome	Shandong University	SAMN03380226	GCA_002221505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/505/GCA_002221505.1_ASM222150v1	-	KMM 661
Yersinia pseudotuberculosis B-6862	1286085	PRJEB1338	187426	Proteobacteria	Gammaproteobacteria	4.27254	47.5	-	CAQU01	247	3911	3644	2/20/13	5/19/17	Contig	UPSUD	SAMEA2271926	GCA_000343975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/975/GCA_000343975.1_ASM34397v1	23580708	B-6862
Planococcus donghaensis	414778	PRJNA330591	330591	Terrabacteria group	Firmicutes	3.31933	40.1252	chromosome:NZ_CP016543.2/CP016543.2; plasmid unnamed:NZ_CP016544.1/CP016544.1	-	2	3257	3106	7/20/16	4/13/17	Complete Genome	University of Malaya	SAMN05417750	GCA_001687665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/665/GCA_001687665.2_ASM168766v2	-	DSM 22276
Capnocytophaga gingivalis	1017	PRJNA369395	369395	FCB group	Bacteroidetes/Chlorobi group	2.83863	40.1	chromosome:NZ_CP022386.1/CP022386.1	-	1	2724	2574	9/14/17	9/16/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06289147	GCA_002302415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/415/GCA_002302415.1_ASM230241v1	-	H1496
Streptococcus salivarius	1304	PRJNA243896	243896	Terrabacteria group	Firmicutes	2.34526	39.5	-	JJMS01	48	2215	2094	6/27/14	4/2/17	Contig	University of Malaya	SAMN02720831	GCA_000714455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/455/GCA_000714455.1_De_Novo_Assembly	-	YU10
Shigella boydii	621	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.83729	50.7	-	JVNX01	239	4950	4690	7/10/15	2/23/17	Contig	University of Washington	SAMN03197453	GCA_001063095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/095/GCA_001063095.1_ASM106309v1	26230489	260_SBOY
Clostridioides difficile QCD-37x79	479834	PRJNA21109	21109	Terrabacteria group	Firmicutes	4.33299	28.3834	chromosome:NZ_CM000658.1/CM000658.1	ABHG02	15	4048	3889	11/5/07	5/18/17	Chromosome	McGill University	SAMN02470533	GCA_000154685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/685/GCA_000154685.1_cdqaf	-	-
Streptococcus salivarius	1304	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.25923	40.1	chromosome:NZ_CP020451.1/CP020451.1	-	1	2148	1957	3/29/17	4/1/17	Complete Genome	US Food and Drug Administration 	SAMN04875585	GCA_002073835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/835/GCA_002073835.1_ASM207383v1	-	FDAARGOS_259
Candidatus Pelagibacter ubique	198252	PRJEB9287	287342	Proteobacteria	Alphaproteobacteria	0.945491	29.1	-	CVSI01	74	1050	975	6/17/15	4/10/17	Contig	UNIVERSITY OF CALIFORNIA - SAN DIEGO	SAMEA3368560	GCA_001179985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/985/GCA_001179985.1_CLC_assembled_contigs	-	SCGC AAA795-F16
Corynebacterium jeikeium	38289	PRJNA238244	238244	Terrabacteria group	Actinobacteria	2.41194	61.5	-	JFCM01	84	2148	2006	8/6/14	4/2/17	Contig	University of Washington	SAMN02641061	GCA_000738405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/405/GCA_000738405.1_Cj47447	25116839	Cj47447
Ralstonia solanacearum FQY_4	1262456	PRJNA182081	182081	Proteobacteria	Betaproteobacteria	5.80525	66.792	chromosome:NC_020799.1/CP004012.1; plasmid megaplasmid:NC_021745.1/CP004013.1	-	2	5192	4972	3/22/13	5/19/17	Chromosome	Guizhou Tobacco Research Institute	SAMN02603298	GCA_000348545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/545/GCA_000348545.1_ASM34854v1	23661471	FQY_4
Planococcus halocryophilus	1215089	PRJNA328203	328203	Terrabacteria group	Firmicutes	3.42489	40.1	chromosome:NZ_CP016537.2/CP016537.2	-	1	3378	3219	7/20/16	4/13/17	Complete Genome	University of Malaya	SAMN05366366	GCA_001687585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/585/GCA_001687585.2_ASM168758v2	-	DSM 24743
Streptococcus salivarius	1304	PRJNA266841	266841	Terrabacteria group	Firmicutes	2.18892	40.1	chromosome:NZ_CP009913.1/CP009913.1	-	1	2068	1903	11/19/14	4/2/17	Complete Genome	University of Otago	SAMN03174835	GCA_000785515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/515/GCA_000785515.1_ASM78551v1	-	NCTC 8618
Haemophilus parasuis ZJ0906	1322346	PRJNA197214	197214	Proteobacteria	Gammaproteobacteria	2.32474	40.1	chromosome:CP005384.1	-	1	2289	2211	6/19/13	1/31/14	Complete Genome	Nanjing Agricultural University Bioinformatics Center	SAMN02603634	GCA_000439395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/395/GCA_000439395.1_ASM43939v1	-	ZJ0906
Bacillus pumilus S-1	1076692	PRJNA72175	72175	Terrabacteria group	Firmicutes	3.69286	41.3	-	AGBY01	144	3781	3683	9/8/11	3/30/17	Scaffold	Shanghai Jiao Tong University	SAMN02470966	GCA_000225935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/935/GCA_000225935.1_ASM22593v1	-	S-1
Streptococcus salivarius JIM8777	347253	PRJEA67171	67171	Terrabacteria group	Firmicutes	2.21057	40.1	chromosome:NC_017595.1/FR873482.1	-	1	2059	1932	6/27/11	3/30/17	Complete Genome	Institut National de la Recherche Agronomique (INRA)	SAMEA2272047	GCA_000253315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/315/GCA_000253315.1_ASM25331v1	21742871	JIM8777
Psychromonas ingrahamii 37	357804	PRJNA16187	16187	Proteobacteria	Gammaproteobacteria	4.5596	40.1	chromosome:NC_008709.1/CP000510.1	-	1	3915	3683	12/22/06	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02598361	GCA_000015285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/285/GCA_000015285.1_ASM1528v1	-	37
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.91588	66.9889	chromosome 1:NZ_CP019666.1/CP019666.1; chromosome 2:NZ_CP019664.1/CP019664.1; chromosome 3:NZ_CP019667.1/CP019667.1; plasmid unnamed1:NZ_CP019665.1/CP019665.1	-	4	7491	7174	2/15/17	2/23/17	Chromosome	University of British Columbia	SAMN05001798	GCA_001999805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/805/GCA_001999805.1_ASM199980v1	-	VC2307
Lactobacillus reuteri mlc3	863369	PRJNA50435	50435	Terrabacteria group	Firmicutes	2.01863	38.5	-	AEAW01	126	1940	1811	7/13/10	3/30/17	Contig	"Department of Food Science and Technology, Univ. Nebraska Lincoln"	SAMN02471903	GCA_000179435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/435/GCA_000179435.1_ASM17943v1	21379339	mlc3
Pseudoalteromonas translucida KMM 520	1315283	PRJNA196224	196224	Proteobacteria	Gammaproteobacteria	4.14759	40.0905	chromosome I:NZ_CP011034.1/CP011034.1; chromosome II:NZ_CP011035.1/CP011035.1	-	2	3784	3563	12/11/15	4/16/17	Complete Genome	Shandong University	SAMN03380229	GCA_001465295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/465/295/GCA_001465295.1_ASM146529v1	-	KMM 520
Bacteroides fragilis HMW 616	1073388	PRJNA71529	71529	FCB group	Bacteroidetes/Chlorobi group	5.44919	43.4	-	ALOB01	9	4784	4507	9/17/12	5/18/17	Scaffold	Broad Institute	SAMN02463954	GCA_000297755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/755/GCA_000297755.1_Bact_frag_HMW_616_V1	-	HMW 616
Shigella sonnei 08-7765	1212581	PRJNA171088	171088	Proteobacteria	Gammaproteobacteria	4.8855	51	-	AMKI01	57	5378	4422	1/6/15	8/8/17	Contig	Institute for Genome Sciences	SAMN03276482	GCA_000815825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/825/GCA_000815825.1_ASM81582v1	-	Aug-65
Pseudoalteromonas haloplanktis TAC125	326442	PRJNA15713	15713	Proteobacteria	Gammaproteobacteria	3.85027	40.068	chromosome I:NC_007481.1/CR954246.1; chromosome II:NC_007482.1/CR954247.1	-	2	3521	3356	9/28/05	3/30/17	Complete Genome	CNRS	SAMEA3138224	GCA_000026085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/085/GCA_000026085.1_ASM2608v1	16169927	TAC125
Bacillus licheniformis 5-2-D	1169412	PRJNA157337	157337	Terrabacteria group	Firmicutes	4.16126	46.1	-	AJLW01	46	4332	4166	4/30/12	5/18/17	Contig	Shanghai Jiao Tong University	SAMN02470889	GCA_000260535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/535/GCA_000260535.1_Blic5	22815449	5-2-D
Histophilus somni	731	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.36861	37.3	-	LQGE01	300	2315	1978	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366578	GCA_001931025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/025/GCA_001931025.1_ASM193102v1	-	3605HS
Vibrio vulnificus JY1701	1035117	PRJNA67137	67137	Proteobacteria	Gammaproteobacteria	4.93884	46.5	-	AFSY01	329	4752	3927	6/18/12	5/19/17	Contig	"Bioinformatics and Genomics Department, University of North Carolina at Charlotte"	SAMN01893931	GCA_000269765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/765/GCA_000269765.1_ASM26976v1	22662170	JY1701
Pseudomonas syringae pv. syringae SM	1262350	PRJNA181198	181198	Proteobacteria	Gammaproteobacteria	6.1241	58.9658	chromosome:NZ_CM001986.1/CM001986.1; plasmid pSM1:NZ_CM001987.1/CM001987.1	APWT01	2	5511	5203	6/17/13	3/24/17	Chromosome	"Institute of Plant Biology, University of Zurich"	SAMN02472030	GCA_000412165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/165/GCA_000412165.1_PSSSMv1.0	23950121	SM
Acinetobacter sp. NCu2D-2	1608473	PRJNA315981	315981	Proteobacteria	Gammaproteobacteria	3.04828	40.0475	chromosome:NZ_CP015594.1/CP015594.1; plasmid unnamed:NZ_CP015595.1/CP015595.1	-	2	2912	2705	5/19/16	4/6/17	Complete Genome	Robert Koch-Institut	SAMN04572529	GCA_001647675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/675/GCA_001647675.1_ASM164767v1	-	NCu2D-2
Mycoplasma pneumoniae	2104	PRJNA328823	328823	Terrabacteria group	Tenericutes	0.816528	40	chromosome:NZ_CP017343.1/CP017343.1	-	1	791	710	5/17/17	5/24/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05391744	GCA_002147855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/855/GCA_002147855.1_ASM214785v1	28410368	M129 2002
Mycoplasma pneumoniae	2104	PRJNA328823	328823	Terrabacteria group	Tenericutes	0.816292	40	chromosome:NZ_CP017328.1/CP017328.1	-	1	791	707	5/11/17	5/22/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05391693	GCA_002127985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/985/GCA_002127985.1_ASM212798v1	28410368	685
Mycoplasma pneumoniae	2104	PRJNA328823	328823	Terrabacteria group	Tenericutes	0.818603	40	chromosome:NZ_CP017329.1/CP017329.1	-	1	792	705	5/11/17	5/22/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05391695	GCA_002128005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/005/GCA_002128005.1_ASM212800v1	28410368	E57
Mycoplasma pneumoniae	2104	PRJNA328823	328823	Terrabacteria group	Tenericutes	0.816492	40	chromosome:NZ_CP017330.1/CP017330.1	-	1	793	713	5/11/17	5/22/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05391698	GCA_002128025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/025/GCA_002128025.1_ASM212802v1	28410368	549
Fusobacterium nucleatum subsp. vincentii 4_1_13	469606	PRJNA32479	32479	Fusobacteria	Fusobacteriia	2.27113	27	-	ACDE02	7	2237	2100	3/2/09	4/3/17	Scaffold	Broad Institute	SAMN02463710	GCA_000158255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/255/GCA_000158255.2_Fuso_sp_4_1_13_V2	-	4_1_13
Agrobacterium radiobacter DSM 30147	1336745	PRJNA205087	205087	Proteobacteria	Alphaproteobacteria	7.17889	59.9	-	ASXY01	612	6999	6563	7/10/13	4/1/17	Contig	Huazhong Agricultural University	SAMN02469899	GCA_000421945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/945/GCA_000421945.1_genome	-	DSM 30147
"Shigella flexneri II:(3)4,7(8)"	1290392	PRJNA188484	188484	Proteobacteria	Gammaproteobacteria	4.86617	50.6	-	AWOX01	196	5366	4337	9/16/13	8/8/17	Scaffold	Korea National Institute of Health	SAMN02470147	GCA_000493265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/265/GCA_000493265.1_Shigella_flexneri_II_3_4_7_8_1.0	-	"II:(3)4,7(8)"
Mycoplasma pneumoniae	2104	PRJNA328823	328823	Terrabacteria group	Tenericutes	0.816491	40	chromosome:NZ_CP017331.1/CP017331.1	-	1	794	709	5/11/17	5/22/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05391700	GCA_002128045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/045/GCA_002128045.1_ASM212804v1	28410368	FL8
Mycoplasma pneumoniae	2104	PRJNA328823	328823	Terrabacteria group	Tenericutes	0.816459	40	chromosome:NZ_CP017332.1/CP017332.1	-	1	793	708	5/11/17	5/22/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05391704	GCA_002128065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/065/GCA_002128065.1_ASM212806v1	28410368	E16
Xylella fastidiosa	2371	PRJNA352544	352544	Proteobacteria	Gammaproteobacteria	2.51152	51.8	-	MPAZ01	83	2428	2157	11/25/16	4/5/17	Scaffold	USDA-ARS	SAMN05982167	GCA_001886315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/315/GCA_001886315.1_BB01	-	BB01
Mycoplasma pneumoniae	2104	PRJNA328823	328823	Terrabacteria group	Tenericutes	0.817353	40	chromosome:NZ_CP017340.1/CP017340.1	-	1	792	706	5/11/17	5/22/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05391720	GCA_002128085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/085/GCA_002128085.1_ASM212808v1	28410368	RI3
Actinobacillus pleuropneumoniae S8	1224142	PRJNA172948	172948	Proteobacteria	Gammaproteobacteria	2.26346	41.2	-	ALYN01	81	2207	2079	9/10/12	3/30/17	Contig	Harbin Veterinary Research Institute 	SAMN02469874	GCA_000295915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/915/GCA_000295915.1_ASM29591v1	23144372	S8
Leptospira interrogans str. C10069	1001591	PRJNA65055	65055	Spirochaetes	Spirochaetia	4.74108	35.1	-	AFLZ02	43	4292	3854	6/7/11	5/18/17	Contig	J. Craig Venter Institute	SAMN02436629	GCA_000216235.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/235/GCA_000216235.3_gls454077v2.0	-	C10069
Mycoplasma pneumoniae	2104	PRJNA328823	328823	Terrabacteria group	Tenericutes	0.817171	40	chromosome:NZ_CP017341.1/CP017341.1	-	1	792	706	5/11/17	5/22/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05391721	GCA_002128105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/105/GCA_002128105.1_ASM212810v1	28410368	1801
Mycoplasma pneumoniae	2104	PRJNA328823	328823	Terrabacteria group	Tenericutes	0.818772	40	chromosome:NZ_CP017342.1/CP017342.1	-	1	795	708	5/11/17	5/22/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05391741	GCA_002128125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/125/GCA_002128125.1_ASM212812v1	28410368	CO3
Mycoplasma pneumoniae	2104	PRJNA328823	328823	Terrabacteria group	Tenericutes	0.816637	40	chromosome:NZ_CP017333.1/CP017333.1	-	1	794	710	5/11/17	5/22/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05391706	GCA_002128145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/145/GCA_002128145.1_ASM212814v1	28410368	FL1
Mycoplasma pneumoniae	2104	PRJNA328823	328823	Terrabacteria group	Tenericutes	0.817125	40	chromosome:NZ_CP017335.1/CP017335.1	-	1	791	703	5/11/17	5/22/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05391709	GCA_002128165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/165/GCA_002128165.1_ASM212816v1	28410368	CO103
Mycoplasma pneumoniae	2104	PRJNA328823	328823	Terrabacteria group	Tenericutes	0.817038	40	chromosome:NZ_CP017334.1/CP017334.1	-	1	793	711	5/11/17	5/22/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05391708	GCA_002128185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/185/GCA_002128185.1_ASM212818v1	28410368	K27
Mycoplasma pneumoniae	2104	PRJNA328823	328823	Terrabacteria group	Tenericutes	0.817231	40	chromosome:NZ_CP017337.1/CP017337.1	-	1	793	706	5/11/17	5/22/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05391712	GCA_002128205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/205/GCA_002128205.1_ASM212820v1	28410368	1006
Mycoplasma pneumoniae	2104	PRJNA328823	328823	Terrabacteria group	Tenericutes	0.817126	40	chromosome:NZ_CP017338.1/CP017338.1	-	1	790	705	5/11/17	5/22/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05391714	GCA_002128235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/235/GCA_002128235.1_ASM212823v1	28410368	1134
Prochlorococcus marinus str. GP2	59925	PRJNA246696	246696	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.62431	31.2	-	JNAH01	11	1804	1732	9/29/14	4/11/17	Contig	MIT	SAMN02769550	GCA_000759885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/885/GCA_000759885.1_ASM75988v1	25977791	GP2
Tropheryma whipplei str. Dig9	1294037	PRJEB1454	189634	Terrabacteria group	Actinobacteria	0.880115	46.4	-	CAUY01	146	847	782	3/28/13	3/31/17	Contig	URMITE	SAMEA2272148	GCA_000359365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/365/GCA_000359365.1_ASM35936v1	-	Dig9
Mycobacterium bovis Bz 31150	1438823	PRJNA233393	233393	Terrabacteria group	Actinobacteria	4.27201	65.5	-	JKAM01	136	4293	3943	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02567761	GCA_000649655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/655/GCA_000649655.1_Myco_bovi_Bz_31150_V1	26450718	Bz 31150
Mycobacterium avium XTB13-223	1427296	PRJNA229694	229694	Terrabacteria group	Actinobacteria	5.13025	69	-	JLIC01	4	4806	4612	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02419652	GCA_000655755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/755/GCA_000655755.1_Myco_tube_XTB13-223_V1	-	XTB13-223
Clostridium perfringens	1502	PRJNA272114	272114	Terrabacteria group	Firmicutes	3.59027	27.8	-	LRPU01	228	3280	3115	2/2/16	4/4/17	Scaffold	The Genome Institute at Washington University	SAMN03842618	GCA_001546355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/355/GCA_001546355.1_ASM154635v1	-	MJR7757A
Xanthomonas campestris pv. raphani	359385	PRJNA185980	185980	Proteobacteria	Gammaproteobacteria	4.91209	65.3965	chromosome:NZ_CM002637.1/CM002637.1	ATNP01	2	4331	4017	3/11/14	4/6/17	Chromosome	CNRS	SAMN02645649	GCA_000590355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/355/GCA_000590355.1_20120327	26581393	CFBP 5828R
Mycoplasma pneumoniae	2104	PRJNA328823	328823	Terrabacteria group	Tenericutes	0.818735	40	chromosome:NZ_CP017339.1/CP017339.1	-	1	793	704	5/11/17	5/22/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05391717	GCA_002128265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/265/GCA_002128265.1_ASM212826v1	28410368	519
Mycoplasma pneumoniae	2104	PRJNA328823	328823	Terrabacteria group	Tenericutes	0.817252	40	chromosome:NZ_CP017336.1/CP017336.1	-	1	790	704	5/11/17	5/22/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05391710	GCA_002128285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/285/GCA_002128285.1_ASM212828v1	28410368	GA3
Staphylococcus epidermidis	1282	PRJNA304324	304324	Terrabacteria group	Firmicutes	2.48797	32.2	-	LNUS01	5	2456	2295	12/18/15	3/27/17	Scaffold	Aarhus University	SAMN04299194	GCA_001469315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/315/GCA_001469315.1_ASM146931v1	26924200	AU23
Mycoplasma pneumoniae	2104	PRJNA382141	382141	Terrabacteria group	Tenericutes	0.816433	40	chromosome:NZ_CP020711.1/CP020711.1	-	1	791	709	4/18/17	4/21/17	Complete Genome	Affiliated Hospital of Academy of Military Medical Science	SAMN06700070	GCA_002095995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/995/GCA_002095995.1_ASM209599v1	-	S4-tet-R
Mycoplasma pneumoniae	2104	PRJNA382135	382135	Terrabacteria group	Tenericutes	0.816433	40	chromosome:NZ_CP020710.1/CP020710.1	-	1	791	707	4/18/17	4/21/17	Complete Genome	Affiliated Hospital of Academy of Military Medical Science	SAMN06699949	GCA_002096015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/015/GCA_002096015.1_ASM209601v1	-	S34-tet-R
Mycoplasma pneumoniae	2104	PRJNA382145	382145	Terrabacteria group	Tenericutes	0.81643	40	chromosome:NZ_CP020712.1/CP020712.1	-	1	790	708	4/18/17	4/21/17	Complete Genome	Affiliated Hospital of Academy of Military Medical Science	SAMN06700077	GCA_002096035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/035/GCA_002096035.1_ASM209603v1	-	S12-tet-R
Mycoplasma pneumoniae	2104	PRJNA382063	382063	Terrabacteria group	Tenericutes	0.816435	40	chromosome:NZ_CP020689.1/CP020689.1	-	1	792	710	4/13/17	4/17/17	Complete Genome	Affiliated Hospital of Academy of Military Medical Science	SAMN06699082	GCA_002090215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/215/GCA_002090215.1_ASM209021v1	-	S63-tet-R
Mycoplasma pneumoniae	2104	PRJNA382066	382066	Terrabacteria group	Tenericutes	0.816378	40	chromosome:NZ_CP020690.1/CP020690.1	-	1	790	708	4/13/17	4/17/17	Complete Genome	Affiliated Hospital of Academy of Military Medical Science	SAMN06699089	GCA_002090235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/235/GCA_002090235.1_ASM209023v1	-	FH-tet-R
Mycoplasma pneumoniae	2104	PRJNA382067	382067	Terrabacteria group	Tenericutes	0.816404	40	chromosome:NZ_CP020691.1/CP020691.1	-	1	792	701	4/13/17	4/17/17	Complete Genome	Affiliated Hospital of Academy of Military Medical Science	SAMN06699090	GCA_002090275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/275/GCA_002090275.1_ASM209027v1	-	S68-tet-R
Mycoplasma pneumoniae	2104	PRJNA382068	382068	Terrabacteria group	Tenericutes	0.815909	40	chromosome:NZ_CP020692.1/CP020692.1	-	1	790	704	4/13/17	4/17/17	Complete Genome	Affiliated Hospital of Academy of Military Medical Science	SAMN06699102	GCA_002090295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/295/GCA_002090295.1_ASM209029v1	-	S55-tet-R
Mycoplasma pneumoniae	2104	PRJNA382069	382069	Terrabacteria group	Tenericutes	0.816429	40	chromosome:NZ_CP020693.1/CP020693.1	-	1	791	709	4/13/17	4/17/17	Complete Genome	Affiliated Hospital of Academy of Military Medical Science	SAMN06699128	GCA_002090315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/315/GCA_002090315.1_ASM209031v1	-	S91-tet-R
[Haemophilus] parasuis	738	PRJNA377928	377928	Proteobacteria	Gammaproteobacteria	2.30535	40	chromosome:NZ_CP020085.1/CP020085.1	-	1	2236	1962	3/21/17	4/10/17	Complete Genome	Haemophilus parasuis	SAMN06477788	GCA_002055565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/565/GCA_002055565.1_ASM205556v1	-	CL120103
Pseudomonas fluorescens	294	PRJNA312098	312098	Proteobacteria	Gammaproteobacteria	6.18329	60	chromosome:NZ_CP014868.1/CP014868.1	-	1	5704	5497	3/30/16	4/5/17	Chromosome	Agriculture and Agri-Food Canada	SAMN04495906	GCA_001602175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/175/GCA_001602175.1_ASM160217v1	27231365	KENGFT3
Sphingobacterium sp. B29	1933220	PRJNA360558	360558	FCB group	Bacteroidetes/Chlorobi group	6.35719	40	chromosome:NZ_CP019158.1/CP019158.1	-	1	5400	5124	1/17/17	4/17/17	Complete Genome	Thompson Rivers University	SAMN06212354	GCA_001952815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/815/GCA_001952815.1_ASM195281v1	-	B29
Mycoplasma pneumoniae	2104	PRJNA328823	328823	Terrabacteria group	Tenericutes	0.817275	40	chromosome:NZ_CP017327.1/CP017327.1	-	1	792	700	12/13/16	4/6/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05391692	GCA_001901705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/705/GCA_001901705.1_ASM190170v1	-	FH 2009
Staphylococcus epidermidis	1282	PRJNA379934	379934	Terrabacteria group	Firmicutes	2.45752	32.0967	plasmid pATCC14990-2:NZ_CM007846.1/CM007846.1	NARC01	37	2438	2292	4/12/17	4/16/17	Scaffold	Loyola University Chicago	SAMN06624123	GCA_002087975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/975/GCA_002087975.1_ASM208797v1	-	ATCC 14990
Mycoplasma pneumoniae	2104	PRJDB4434	327994	Terrabacteria group	Tenericutes	0.817074	40	chromosome:AP017318.1	-	1	778	735	7/5/16	7/28/17	Complete Genome	National Institute of Infectious Diseases	SAMD00044317	GCA_002355695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/695/GCA_002355695.1_ASM235569v1	-	KCH-402
Mycoplasma pneumoniae	2104	PRJDB4435	327995	Terrabacteria group	Tenericutes	0.817099	40	chromosome:AP017319.1	-	1	785	742	7/5/16	7/28/17	Complete Genome	"Department of Bacteriology II, National Institute of Infectious Diseases"	SAMD00044318	GCA_002355715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/715/GCA_002355715.1_ASM235571v1	-	KCH-405
Xanthomonas campestris	339	PRJNA193296	193296	Proteobacteria	Gammaproteobacteria	5.05431	65.0985	chromosome:NZ_CM002638.1/CM002638.1	ATNQ01	2	4504	4136	3/11/14	4/6/17	Chromosome	CNRS	SAMN02645672	GCA_000590375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/375/GCA_000590375.1_20120327	26581393	CFBP 5825R
Clostridium perfringens C str. JGS1495	445334	PRJNA20025	20025	Terrabacteria group	Firmicutes	3.66133	28.6	-	ABDU01	84	3348	3085	7/11/07	4/6/17	Contig	J. Craig Venter Institute	SAMN02436294	GCA_000171135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/135/GCA_000171135.1_ASM17113v1	-	JGS1495
Mycobacterium avium subsp. paratuberculosis	1770	PRJNA297385	297385	Terrabacteria group	Actinobacteria	4.75027	69.3	-	LKUS01	259	4599	4193	12/14/16	4/6/17	Scaffold	China agricultural university	SAMN04121034	GCA_001904575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/575/GCA_001904575.1_ASM190457v1	27006704	2015WD-1
Mycobacterium bovis B2 7505	1438822	PRJNA233394	233394	Terrabacteria group	Actinobacteria	4.17485	65.4	-	JKAL01	206	4246	3778	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02567762	GCA_000649675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/675/GCA_000649675.1_Myco_bovi_B2_7505_V1	26450718	B2 7505
Tropheryma whipplei str. DigMusc17	1294038	PRJEB1455	189638	Terrabacteria group	Actinobacteria	0.884564	46.4	-	CAVA01	128	856	780	3/28/13	3/31/17	Contig	URMITE	SAMEA2272748	GCA_000359385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/385/GCA_000359385.1_ASM35938v1	-	DigMusc17
Prochlorococcus marinus str. MIT 9123	167545	PRJNA246696	246696	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.69775	31	-	JNAK01	18	1904	1809	9/29/14	4/2/17	Contig	MIT	SAMN02769554	GCA_000759935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/935/GCA_000759935.1_ASM75993v1	25977791	MIT 9123
[Haemophilus] parasuis	738	PRJNA317522	317522	Proteobacteria	Gammaproteobacteria	2.27754	40	chromosome:NZ_CP015099.1/CP015099.1	-	1	2220	1971	4/6/16	4/5/17	Complete Genome	Sichuan Agricultural University	SAMN04620679	GCA_001611775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/775/GCA_001611775.1_ASM161177v1	-	SC1401
Streptococcus mitis	28037	PRJNA311086	311086	Terrabacteria group	Firmicutes	2.16792	40	chromosome:NZ_CP014326.1/CP014326.1	-	1	2113	1917	2/12/16	4/4/17	Complete Genome	MD Anderson	SAMN04461788	GCA_001560895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/895/GCA_001560895.1_ASM156089v1	27056234	SVGS_061
Mycoplasma pneumoniae	2104	PRJNA310359	310359	Terrabacteria group	Tenericutes	0.816498	40	chromosome:NZ_CP014267.1/CP014267.1	-	1	791	707	2/11/16	4/4/17	Complete Genome	Institute Of Microbiology Chinese Academy of Sciences	SAMN04451628	GCA_001558175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/175/GCA_001558175.1_ASM155817v1	27056229	C267
Mycoplasma pneumoniae	2104	PRJNA306968	306968	Terrabacteria group	Tenericutes	0.801203	40	chromosome:NZ_CP013829.1/CP013829.1	-	1	776	691	1/8/16	4/4/17	Complete Genome	Institute Of Microbiology Chinese Academy of Sciences	SAMN04370656	GCA_001509195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/195/GCA_001509195.1_ASM150919v1	26988036	S355
Mycoplasma pneumoniae PO1	1233262	PRJNA175467	175467	Terrabacteria group	Tenericutes	0.817216	40	chromosome:NZ_CP010551.1/CP010551.1	-	1	792	703	8/21/15	4/4/17	Complete Genome	University of Alabama at Birmingham	SAMN02471519	GCA_000319655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/655/GCA_000319655.2_ASM31965v2	"2,341,284,526,275,900"	PO1
Mycoplasma pneumoniae PI 1428	1236904	PRJNA176271	176271	Terrabacteria group	Tenericutes	0.816496	40	chromosome:NZ_CP010538.1/CP010538.1	-	1	792	709	8/21/15	4/4/17	Complete Genome	University of Alabama at Birmingham	SAMN02471520	GCA_000319675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/675/GCA_000319675.2_ASM31967v2	"2,341,284,526,275,900"	PI 1428
Mycoplasma pneumoniae 19294	1213463	PRJNA171159	171159	Terrabacteria group	Tenericutes	0.817313	40	chromosome:NZ_CP010539.1/CP010539.1	-	1	794	706	8/21/15	4/4/17	Complete Genome	University of Alabama at Birmingham	SAMN02471521	GCA_000387745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/745/GCA_000387745.2_ASM38774v2	26275904	19294
Leptospira interrogans str. 2002000621	1001588	PRJNA65045	65045	Spirochaetes	Spirochaetia	4.91878	35.2	-	AFLU02	71	4479	4021	6/7/11	5/18/17	Contig	J. Craig Venter Institute	SAMN02436628	GCA_000216335.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/335/GCA_000216335.3_Lint2002000621v2.0	-	2002000621
Actinobacillus pleuropneumoniae	715	PRJNA266228	266228	Proteobacteria	Gammaproteobacteria	2.26283	41.1	-	JSVF01	52	2194	1845	1/12/15	4/2/17	Contig	LNCC	SAMN03160315	GCA_000817445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/445/GCA_000817445.1_ASM81744v1	25745011	1022
Mycoplasma pneumoniae 39443	1263761	PRJNA182273	182273	Terrabacteria group	Tenericutes	0.817184	40	chromosome:NZ_CP010540.1/CP010540.1	-	1	789	701	8/21/15	4/4/17	Complete Genome	University of Alabama at Birmingham	SAMN03284385	GCA_001272715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/715/GCA_001272715.1_ASM127271v1	26275904	39443
Xylella fastidiosa subsp. sandyi Ann-1	155920	PRJNA261	261	Proteobacteria	Gammaproteobacteria	2.72975	52	-	AAAM04	275	2723	2298	7/10/02	4/11/17	Contig	DOE Joint Genome Institute	SAMN02441076	GCA_000166855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/855/GCA_000166855.2_ASM16685v2	-	Ann-1
Mycoplasma pneumoniae 51494	1263758	PRJNA182270	182270	Terrabacteria group	Tenericutes	0.816404	40	chromosome:NZ_CP010541.1/CP010541.1	-	1	792	706	8/21/15	4/4/17	Complete Genome	University of Alabama at Birmingham	SAMN03284386	GCA_001272735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/735/GCA_001272735.1_ASM127273v1	26275904	51494
Mycoplasma pneumoniae 54089	1263756	PRJNA182263	182263	Terrabacteria group	Tenericutes	0.816565	40	chromosome:NZ_CP010542.1/CP010542.1	-	1	791	705	8/21/15	4/4/17	Complete Genome	University of Alabama at Birmingham	SAMN03284387	GCA_001272755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/755/GCA_001272755.1_ASM127275v1	26275904	54089
Shigella flexneri	623	PRJNA246255	246255	Proteobacteria	Gammaproteobacteria	4.36675	50.6	-	JMRK01	307	4691	4100	6/19/14	2/23/17	Scaffold	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN02745623	GCA_000710235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/235/GCA_000710235.1_ASM71023v1	25035336	4S BJ10610
Agrobacterium tumefaciens GW4	1315272	PRJNA196211	196211	Proteobacteria	Alphaproteobacteria	5.63666	59.8	-	AWGV01	459	5572	5110	6/6/14	4/2/17	Contig	gejiao@mail.hzau.edu.cn	SAMN02665300	GCA_000699125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/125/GCA_000699125.1_genome	-	GW4
Fusobacterium nucleatum subsp. animalis D11	556264	PRJNA32501	32501	Fusobacteria	Fusobacteriia	2.36354	27	-	ACDS02	17	2384	2011	2/18/09	4/21/17	Scaffold	Broad Institute	SAMN02463718	GCA_000158535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/535/GCA_000158535.2_Fuso_nucl_D11_V2	-	D11
Mycoplasma pneumoniae 54524	1263757	PRJNA182264	182264	Terrabacteria group	Tenericutes	0.816583	40	chromosome:NZ_CP010543.1/CP010543.1	-	1	792	708	8/21/15	4/4/17	Complete Genome	University of Alabama at Birmingham	SAMN03284388	GCA_001272775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/775/GCA_001272775.1_ASM127277v1	26275904	54524
Mycoplasma pneumoniae 85084	1263762	PRJNA182274	182274	Terrabacteria group	Tenericutes	0.816404	40	chromosome:NZ_CP010544.1/CP010544.1	-	1	793	708	8/21/15	4/4/17	Complete Genome	University of Alabama at Birmingham	SAMN03284389	GCA_001272795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/795/GCA_001272795.1_ASM127279v1	26275904	85084
Mycoplasma pneumoniae 85138	1263760	PRJNA182272	182272	Terrabacteria group	Tenericutes	0.816402	40	chromosome:NZ_CP010545.1/CP010545.1	-	1	792	708	8/21/15	4/4/17	Complete Genome	University of Alabama at Birmingham	SAMN03284391	GCA_001272815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/815/GCA_001272815.1_ASM127281v1	26275904	85138
Mycoplasma pneumoniae FH	722438	PRJNA182276	182276	Terrabacteria group	Tenericutes	0.817207	40	chromosome:NZ_CP010546.1/CP010546.1	-	1	791	702	8/21/15	4/4/17	Complete Genome	University of Alabama at Birmingham	SAMN03284384	GCA_001272835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/835/GCA_001272835.1_ASM127283v1	26275904	FH
Mycoplasma pneumoniae M1139	1263763	PRJNA182275	182275	Terrabacteria group	Tenericutes	0.817045	40	chromosome:NZ_CP010547.1/CP010547.1	-	1	791	703	8/21/15	4/4/17	Complete Genome	University of Alabama at Birmingham	SAMN03284392	GCA_001272855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/855/GCA_001272855.1_ASM127285v1	26275904	M1139
Pseudomonas syringae pv. actinidiae ICMP 9617	1194418	PRJNA167426	167426	Proteobacteria	Gammaproteobacteria	6.4977	58.4187	chromosome Chr:NZ_CM002753.1/CM002753.1; plasmid unnamed:NZ_CM002754.1/CM002754.1	AOKP01	2	10969	10529	4/30/14	4/10/17	Chromosome	The New Zealand Institute for Plant & Food Research Limited	SAMN02740942	GCA_000658965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/965/GCA_000658965.1_ASM65896v1	23935484	ICMP 9617
Vibrio vulnificus NBRC 15645 = ATCC 27562	1219061	PRJNA172642	172642	Proteobacteria	Gammaproteobacteria	4.32724	46.7	-	AMQV01	194	4018	3841	9/27/12	5/19/17	Contig	Zhejiang University	SAMN02469425	GCA_000299635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/635/GCA_000299635.1_ASM29963v1	23209214	ATCC 27562
Histophilus somni	731	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.2692	37.3	-	LQGH01	60	2137	1983	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366581	GCA_001931045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/045/GCA_001931045.1_ASM193104v1	-	3758HS
Bacillus licheniformis 10-1-A	1169411	PRJNA157335	157335	Terrabacteria group	Firmicutes	4.31701	45.8	-	AJLV01	31	4507	4340	4/30/12	5/18/17	Contig	Shanghai Jiao Tong University	SAMN02470888	GCA_000260555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/555/GCA_000260555.1_Blic10	22815449	10-1-A
Mycoplasma pneumoniae	2104	PRJNA269312	269312	Terrabacteria group	Tenericutes	0.817169	40	chromosome:NZ_CP010548.1/CP010548.1	-	1	791	705	8/21/15	4/4/17	Complete Genome	University of Alabama at Birmingham	SAMN03252343	GCA_001272875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/875/GCA_001272875.1_ASM127287v1	26275904	M2192
Shigella sonnei 09-1032	1212582	PRJNA171089	171089	Proteobacteria	Gammaproteobacteria	4.9243	51	-	AMKJ01	110	5432	4468	1/6/15	8/8/17	Contig	Institute for Genome Sciences	SAMN03276469	GCA_000815885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/885/GCA_000815885.1_ASM81588v1	-	09-1032
Bacteroides fragilis	817	PRJNA253771	253771	FCB group	Bacteroidetes/Chlorobi group	5.10783	43.4	-	JPGQ01	197	4472	4190	7/11/14	4/2/17	Scaffold	Odense University Hospital	SAMN02892979	GCA_000724795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/795/GCA_000724795.1_DCMOUH0042B1.0	-	DCMOUH0042B
Mycoplasma pneumoniae M2592	1280940	PRJNA186010	186010	Terrabacteria group	Tenericutes	0.817198	40	chromosome:NZ_CP010549.1/CP010549.1	-	1	790	704	8/21/15	4/4/17	Complete Genome	University of Alabama at Birmingham	SAMN03284393	GCA_001272895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/895/GCA_001272895.1_ASM127289v1	26275904	M2592
Lactobacillus reuteri lpuph	863368	PRJNA50437	50437	Terrabacteria group	Firmicutes	2.11662	38.4	-	AEAX01	127	2060	1933	7/13/10	3/30/17	Contig	"Department of Food Science and Technology, Univ. Nebraska Lincoln"	SAMN02471904	GCA_000179455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/455/GCA_000179455.1_ASM17945v1	21379339	lpuph
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.17737	66.995	chromosome 1:NZ_CP019678.1/CP019678.1; chromosome 2:NZ_CP019676.1/CP019676.1; chromosome 3:NZ_CP019675.1/CP019675.1; plasmid unnamed:NZ_CP019677.1/CP019677.1	-	4	7670	7297	2/15/17	4/10/17	Chromosome	University of British Columbia	SAMN05001969	GCA_001999925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/925/GCA_001999925.1_ASM199992v1	-	VC1254
Mycoplasma pneumoniae MAC	1263835	PRJNA182261	182261	Terrabacteria group	Tenericutes	0.817156	40	chromosome:NZ_CP010550.1/CP010550.1	-	1	792	704	8/21/15	4/4/17	Complete Genome	University of Alabama at Birmingham	SAMN03284394	GCA_001272915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/915/GCA_001272915.1_ASM127291v1	26275904	Mac
[Haemophilus] parasuis	738	PRJNA258333	258333	Proteobacteria	Gammaproteobacteria	2.28088	40	chromosome:NZ_CP009237.1/CP009237.1	-	1	2296	2023	8/21/14	9/21/17	Complete Genome	"Bioinformatics Center, Nanjing Agricultural University"	SAMN02996424	GCA_000742795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/795/GCA_000742795.1_ASM74279v1	-	KL0318
Bacillus pumilus	1408	PRJNA270572	270572	Terrabacteria group	Firmicutes	3.67135	41.5	-	JXCM01	23	3800	3669	1/26/15	4/3/17	Scaffold	University of Groningen	SAMN03267270	GCA_000828375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/375/GCA_000828375.1_ASM82837v1	25767247	B4129
[Haemophilus] parasuis	738	PRJNA257533	257533	Proteobacteria	Gammaproteobacteria	2.26593	40	chromosome:NZ_CP009158.1/CP009158.1	-	1	2297	2028	8/18/14	9/21/17	Complete Genome	"Bioinformatics Center, Nanjing Agricultural University"	SAMN02953022	GCA_000740985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/985/GCA_000740985.1_ASM74098v1	-	SH03
Mycoplasma pneumoniae M129-B7	1238993	PRJNA176548	176548	Terrabacteria group	Tenericutes	0.816451	40	chromosome:NC_020076.2/CP003913.2	-	1	792	712	1/4/13	4/3/17	Complete Genome	University of Alabama at Birmingham	SAMN02604130	GCA_000331085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/085/GCA_000331085.2_ASM33108v2	"2,341,284,526,275,900"	M129-B7
Ralstonia solanacearum CMR15	859655	PRJEA50681	50681	Proteobacteria	Betaproteobacteria	5.59037	66.8006	chromosome:NC_017559.1/FP885895.1; plasmid CMR15_mp:NC_017589.1/FP885896.1; plasmid pRSC35:NC_017558.1/FP885893.1	-	3	5041	4814	6/22/10	4/2/17	Chromosome	CEA-Genoscope	SAMEA2272127	GCA_000427195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/195/GCA_000427195.1_ASM42719v1	20550686	CMR15
Corynebacterium jeikeium	38289	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.51644	58.6	-	JUSD01	49	2229	2152	7/10/15	4/3/17	Contig	University of Washington	SAMN03198019	GCA_001058525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/525/GCA_001058525.1_ASM105852v1	26230489	805_CJEI
Candidatus Pelagibacter ubique	198252	PRJEB9287	287342	Proteobacteria	Alphaproteobacteria	0.872902	29.1	-	CVSK01	77	970	898	6/17/15	4/10/17	Contig	UNIVERSITY OF CALIFORNIA - SAN DIEGO	SAMEA3368562	GCA_001180025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/025/GCA_001180025.1_CLC_assembled_contigs	-	SCGC AAA795-J21
Mycoplasma pneumoniae 309	1112856	PRJDB8	78181	Terrabacteria group	Tenericutes	0.817176	40	chromosome:NC_016807.1/AP012303.1	-	1	793	703	12/1/11	3/30/17	Complete Genome	National Institute of Infectious Diseases	SAMD00012611	GCA_000283755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/755/GCA_000283755.1_ASM28375v1	22328753	309
Clostridioides difficile ATCC 43255	499175	PRJNA28559	28559	Terrabacteria group	Firmicutes	4.20698	28.5534	chromosome:NZ_CM000604.1/CM000604.1	ABKJ02	34	3926	3737	2/12/08	5/18/17	Chromosome	McGill University	SAMN02470534	GCA_000155025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/025/GCA_000155025.1_cduab	-	ATCC 43255
Shigella boydii	621	PRJNA293192	293192	Proteobacteria	Gammaproteobacteria	4.36727	50.8	-	LPTR01	305	4873	4116	12/15/16	2/26/17	Contig	"University of Maryland, School of Medicine"	SAMN04001708	GCA_001905915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/915/GCA_001905915.1_ASM190591v1	-	600384
Streptococcus salivarius	1304	PRJNA274768	274768	Terrabacteria group	Firmicutes	2.16481	40.1	-	JYOY01	23	2060	1884	3/25/15	4/3/17	Contig	University at Buffalo	SAMN03334908	GCA_000963265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/265/GCA_000963265.1_ASM96326v1	25999552	UC3162
Mycoplasma pneumoniae FH	722438	PRJNA49525	49525	Terrabacteria group	Tenericutes	0.811088	40	chromosome:NC_017504.1/CP002077.1	-	1	788	680	7/29/10	4/10/17	Complete Genome	J. Craig Venter Institute	SAMN02603455	GCA_000143945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/143/945/GCA_000143945.1_ASM14394v1	20543037	FH
Brucella abortus	235	PRJNA243878	243878	Proteobacteria	Alphaproteobacteria	3.28175	57.1704	chromosome 1:NZ_CP007707.1/CP007707.1; chromosome 2:NZ_CP007708.1/CP007708.1	-	2	3370	3150	8/18/14	3/24/17	Chromosome	Los Alamos National Laboratory	SAMN02769912	GCA_000740945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/945/GCA_000740945.1_ASM74094v1	25237024	3196
Yersinia pseudotuberculosis B-6863	1286086	PRJEB1339	187444	Proteobacteria	Gammaproteobacteria	4.26865	47.5	-	CAQV01	221	3904	3632	2/20/13	5/19/17	Contig	UPSUD	SAMEA2272229	GCA_000343995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/995/GCA_000343995.1_ASM34399v1	23580708	B-6863
Streptococcus mitis B6	365659	PRJNA16302	16302	Terrabacteria group	Firmicutes	2.14661	40	chromosome:NC_013853.1/FN568063.1	-	1	2096	2002	2/16/10	8/28/16	Complete Genome	"Department of Microbiology, University of Kaiserslautern"	SAMEA3138244	GCA_000027165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/027/165/GCA_000027165.1_ASM2716v1	20195536	B6
Leptospira borgpetersenii serovar Mini str. 201000851	1049776	PRJNA74175	74175	Spirochaetes	Spirochaetia	3.97376	40.2	-	AHOS02	41	3838	3521	1/24/12	4/2/17	Contig	J. Craig Venter Institute	SAMN02436414	GCA_000244835.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/835/GCA_000244835.3_gls454191v02	-	201000851
Haemophilus parasuis SH0165	557723	PRJNA31099	31099	Proteobacteria	Gammaproteobacteria	2.26916	40	chromosome:NC_011852.1/CP001321.1	-	1	2273	2050	1/7/09	3/30/17	Complete Genome	Huazhong Agricultural University	SAMN02603313	GCA_000021885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/885/GCA_000021885.1_ASM2188v1	"1,907,439,621,611,180"	SH0165
Campylobacter fetus subsp. venerealis LMG 6570 = CCUG 33900	1265739	PRJNA182729	182729	Proteobacteria	delta/epsilon subdivisions	1.87101	33.2	-	LREW01	63	1935	1801	8/5/16	4/5/17	Contig	"Utrecht University, Faculty of Veterinary Medicine"	SAMN04419577	GCA_001698935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/935/GCA_001698935.1_ASM169893v1	27333878	LMG 6570
Elusimicrobium minutum Pei191	445932	PRJNA19701	19701	Elusimicrobia	Elusimicrobia	1.64356	40	chromosome:NC_010644.1/CP001055.1	-	1	1593	1528	4/30/08	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000042	GCA_000020145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/145/GCA_000020145.1_ASM2014v1	19270133	Pei191
Oenococcus oeni	1247	PRJNA253367	253367	Terrabacteria group	Firmicutes	1.76972	37.8	-	JOOH01	61	1809	1640	6/26/14	3/24/17	Contig	University of Foggia	SAMN02870470	GCA_000712375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/375/GCA_000712375.1_ASM71237v1	25342687	OT3
Streptococcus mitis SK575	1095736	PRJNA75135	75135	Terrabacteria group	Firmicutes	2.0188	39.7	-	AICU01	90	2030	1897	4/5/12	3/30/17	Contig	J. Craig Venter Institute	SAMN00761799	GCA_000257865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/865/GCA_000257865.1_ASM25786v1	-	SK575
Aeromonas salmonicida	645	PRJNA257751	257751	Proteobacteria	Gammaproteobacteria	4.78811	60.5	-	JPWL01	118	4404	4166	9/2/14	4/2/17	Contig	Universidad de Santiago de Chile	SAMN02954503	GCA_000746985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/985/GCA_000746985.1_ASM74698v1	-	CBA100
Mycoplasma pneumoniae M129	272634	PRJNA99	99	Terrabacteria group	Tenericutes	0.816394	40	chromosome:NC_000912.1/U00089.2	-	1	1061	691	11/15/96	8/28/16	Complete Genome	Heidelberg Univ.	SAMN02603304	GCA_000027345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/027/345/GCA_000027345.1_ASM2734v1	"894,863,310,954,595"	M129; ATCC 29342
Butyrivibrio proteoclasticus B316	515622	PRJNA29153	29153	Terrabacteria group	Firmicutes	4.40489	39.999	chromosome 1:NC_014387.1/CP001810.1; chromosome 2:NC_014388.1/CP001811.1; plasmid pCY186:NC_014390.1/CP001813.1; plasmid pCY360:NC_014389.1/CP001812.1	-	4	3888	3782	8/10/10	5/18/17	Complete Genome	AgResearch	SAMN02602973	GCA_000145035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/035/GCA_000145035.1_ASM14503v1	20689770	B316
Coxiella burnetii	777	PRJNA394747	394747	Proteobacteria	Gammaproteobacteria	2.00671	42.5	-	NOLQ01	34	2195	1995	8/11/17	8/15/17	Scaffold	National Institutes of Health	SAMN07349492	GCA_002247265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/265/GCA_002247265.1_ASM224726v1	-	Dyer RSA345
Lactobacillus casei CRF28	1051654	PRJNA68467	68467	Terrabacteria group	Firmicutes	3.03655	46.3	-	AFYN01	57	3187	2736	11/2/12	4/10/17	Contig	University of Wisconsin-Madison and Utah State University	SAMN02472005	GCA_000309645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/645/GCA_000309645.1_ASM30964v1	23035691	CRF28
Salinispora arenicola CNH877	1169176	PRJNA182420	182420	Terrabacteria group	Actinobacteria	5.79592	69.4	-	ARKR01	93	5250	4900	4/22/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02440474	GCA_000378645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/645/GCA_000378645.1_ASM37864v1	-	CNH877
Lactobacillus helveticus CIRM-BIA 953	1226335	PRJEB1542	200913	Terrabacteria group	Firmicutes	2.38556	37	-	CBUH01	203	2593	2056	10/16/13	4/2/17	Contig	INRA STLO	SAMEA2272618	GCA_000493515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/515/GCA_000493515.1_LhCIRMBIA953V1	-	CIRM-BIA 953
Vibrio harveyi	669	PRJNA257174	257174	Proteobacteria	Gammaproteobacteria	5.53196	45	-	JPTS01	1757	5411	4645	7/22/15	4/4/17	Contig	Naval Research Laboratory	SAMN02948029	GCA_001185465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/465/GCA_001185465.1_ASM118546v1	-	H6
Bifidobacterium adolescentis	1680	PRJNA300965	300965	Terrabacteria group	Actinobacteria	2.14863	59.2	-	LNKK01	20	1753	1621	4/24/17	4/26/17	Contig	University of Parma	SAMN04231317	GCA_002107995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/995/GCA_002107995.1_BadoLMG10734v1	27035119	LMG 10734
Lactococcus garvieae	1363	PRJNA257444	257444	Terrabacteria group	Firmicutes	1.95888	38.1	-	JPUJ01	53	1951	1828	4/23/15	4/3/17	Contig	Korea Institute of Ocean Science & Technology	SAMN02951679	GCA_000978865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/978/865/GCA_000978865.1_ASM97886v1	23241376	Lg-ilsanpaik-gs201105
Sulfolobus islandicus M.16.13	1132499	PRJNA80893	80893	TACK group	Crenarchaeota	2.63582	35.1	-	AHJM01	3	2880	2572	1/25/12	3/30/17	Contig	University of Illinois	SAMN02471814	GCA_000245135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/135/GCA_000245135.2_ASM24513v2	22363207	M.16.13
Lactobacillus fermentum	1613	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.90005	52.4	-	JQAU01	102	1872	1716	11/6/15	3/15/17	Scaffold	Shanghai Majorbio	SAMN02797777	GCA_001436835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/835/GCA_001436835.1_ASM143683v1	26415554	DSM 20055
Pseudoalteromonas piratica	1348114	PRJNA266250	266250	Proteobacteria	Gammaproteobacteria	4.81599	39.9648	chromosome 1:NZ_CP009888.1/CP009888.1; chromosome 2:NZ_CP009889.1/CP009889.1	-	2	4390	4237	12/3/14	4/9/17	Complete Genome	University of Hawaii at Manoa	SAMN03160553	GCA_000788395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/395/GCA_000788395.1_ASM78839v1	25593253	OCN003
Porphyromonas gingivalis SJD12	1297567	PRJNA205617	205617	FCB group	Bacteroidetes/Chlorobi group	2.26494	48.4	-	ASYP01	146	2024	1857	6/23/17	6/28/17	Scaffold	Shanghai Jiao Tong University School of Medicine	SAMN07255458	GCA_002208045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/045/GCA_002208045.1_SJD12	-	SJD12
Paenibacillus sp. LPB0068	1763538	PRJNA349787	349787	Terrabacteria group	Firmicutes	4.75718	39.9333	chromosome:NZ_CP017770.1/CP017770.1; plasmid pPC01:NZ_CP017771.1/CP017771.1; plasmid pPC02:NZ_CP017772.1/CP017772.1; plasmid pPC03:NZ_CP017773.1/CP017773.1	-	4	4461	4229	10/31/16	4/13/17	Complete Genome	Korea University	SAMN05933025	GCA_001857945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/945/GCA_001857945.1_ASM185794v1	-	LPB0068
Aliivibrio fischeri	668	PRJNA311605	311605	Proteobacteria	Gammaproteobacteria	4.12809	38.2	-	LTYX01	37	3758	3676	5/9/16	4/5/17	Scaffold	MIT	SAMN04519653	GCA_001640375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/375/GCA_001640375.1_ASM164037v1	27128997	MB14A3
Burkholderia thailandensis E264	271848	PRJNA19251	19251	Proteobacteria	Betaproteobacteria	6.35434	67.7138	chromosome 1:NZ_CM000438.1/CM000438.1; chromosome 2:NZ_CM000439.1/CM000439.1	AACX01	2	5990	5374	4/10/07	5/18/17	Chromosome	Genome Institute of Singapore	SAMN02469820	GCA_000152285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/285/GCA_000152285.1_ASM15228v1	16725056	ATCC 700388
Streptococcus salivarius 57.I	1046629	PRJNA68129	68129	Terrabacteria group	Firmicutes	2.17956	39.9243	chromosome:CP002888.1;  phage_YMC-2011:NC_018285.1/CP002889.1	-	2	2083	1996	7/5/11	1/30/14	Complete Genome	Chang Gung University	SAMN02603111	GCA_000305335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/335/GCA_000305335.2_ASM30533v2	21914897	57.I
Burkholderia multivorans	87883	PRJNA293621	293621	Proteobacteria	Betaproteobacteria	6.54027	67.4	-	LJJG01	323	6255	5806	9/29/15	4/4/17	Contig	National Kaohsiung Normal University	SAMN04008114	GCA_001302465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/465/GCA_001302465.1_BMUNKI379.1	26586873	NKI379
Borrelia burgdorferi CA-11.2A	498739	PRJNA28629	28629	Spirochaetes	Spirochaetia	1.29435	28.3737	plasmid CA-11.2A_cp26:NC_012157.1/CP001484.1; plasmid CA-11.2A_cp32-1:NC_012158.1/CP001479.1; plasmid CA-11.2A_cp32-10:NC_012152.1/CP001477.1; plasmid CA-11.2A_cp32-13:NC_012156.1/CP001478.1; plasmid CA-11.2A_cp32-3:NC_012154.1/CP001483.1; plasmid CA-11.2A_cp32-5:NC_012149.1/CP001475.1; plasmid CA-11.2A_lp17:NC_012227.1/CP001481.1; plasmid CA-11.2A_lp28-3:NC_012228.1/CP001482.1; plasmid CA-11.2A_lp36-28-4:NC_012202.1/CP001480.1; plasmid CA-11.2A_lp38:NC_012170.1/CP001476.1; plasmid CA-11.2A_lp54:NC_012194.1/CP001473.1; plasmid CA-11.2A_lp56:NC_012203.1/CP001474.1	ABJY02	26	1321	1218	2/6/08	3/30/17	Contig	J. Craig Venter Institute	SAMN02436176	GCA_000172315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/315/GCA_000172315.2_ASM17231v2	-	CA-11.2A
Treponema pallidum subsp. pallidum	161	PRJNA271237	271237	Spirochaetes	Spirochaetia	1.13959	52.8	chromosome:NZ_CP010562.1/CP010562.1	-	1	1065	1002	6/3/16	4/5/17	Chromosome	University of Washington	SAMN03273355	GCA_001655395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/395/GCA_001655395.1_ASM165539v1	-	UW074B
Rhizobium leguminosarum bv. phaseoli 4292	936350	PRJNA84253	84253	Proteobacteria	Alphaproteobacteria	7.3466	60.7	-	AQZR01	5	7162	6831	4/22/13	5/19/17	Scaffold	JGI	SAMN02261312	GCA_000379005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/379/005/GCA_000379005.1_ASM37900v1	-	4292
Clavibacter michiganensis subsp. michiganensis	33013	PRJNA331195	331195	Terrabacteria group	Actinobacteria	3.25231	72.6	-	MDHD01	423	3172	2796	5/19/17	5/24/17	Contig	University of California	SAMN05439582	GCA_002151065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/065/GCA_002151065.1_ASM215106v1	-	CASJ003
Brucella canis 96-7258	1341685	PRJNA217056	217056	Proteobacteria	Alphaproteobacteria	3.31291	57.2	-	AXNF01	4	3356	3151	10/24/13	4/2/17	Contig	Broad Institute	SAMN02334510	GCA_000480275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/275/GCA_000480275.1_Bruc_cani_96-7258_V1	-	96-7258
Brucella suis bv. 5 str. 513	520489	PRJNA33033	33033	Proteobacteria	Alphaproteobacteria	3.32368	57.2	-	ACBK01	19	3315	3096	1/23/09	3/30/17	Scaffold	Broad Institute	SAMN02595279	GCA_000157755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/755/GCA_000157755.1_ASM15775v1	-	513
Enterococcus faecalis	1351	PRJNA324367	324367	Terrabacteria group	Firmicutes	2.7116	37.8	chromosome:NZ_CP015998.1/CP015998.1	-	1	2751	2532	1/4/17	4/10/17	Chromosome	Rzeszow University of Technology	SAMN05200884	GCA_001931845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/845/GCA_001931845.1_ASM193184v1	-	AMB05
Bradyrhizobium japonicum CCBAU 25435	1128256	PRJNA77219	77219	Proteobacteria	Alphaproteobacteria	9.46079	63.5	-	AJQA01	520	9292	8475	5/3/12	5/18/17	Contig	China Agricultural University	SAMN02469483	GCA_000261605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/605/GCA_000261605.1_25435	22586130	CCBAU 25435
Microcystis aeruginosa SPC777	482300	PRJNA205171	205171	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.455	42.6	-	ASZQ01	278	5537	4935	6/19/13	4/1/17	Contig	University of Sao Paulo	SAMN02471935	GCA_000412595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/595/GCA_000412595.1_spc777-v1	23908289	SPC777
Methanobrevibacter smithii TS95B	911130	PRJNA59677	59677	Euryarchaeota	Methanobacteria	1.9725	30.3	-	AELY01	44	1848	1667	2/17/11	3/30/17	Contig	Washington University in St.Louis	SAMN02436677	GCA_000190075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/075/GCA_000190075.2_ASM19007v2	21317366	TS95B
Streptococcus dysgalactiae subsp. equisimilis	119602	PRJNA327242	327242	Terrabacteria group	Firmicutes	2.11784	39.5	-	MATV01	81	2099	1931	7/9/16	4/5/17	Contig	The UT MD Anderson Cancer Center	SAMN05327337	GCA_001682745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/745/GCA_001682745.1_ASM168274v1	-	UT_4031CC
Borrelia garinii IPT89	1408829	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.19113	27.8	-	AYAE01	214	1170	578	12/3/13	4/2/17	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378796	GCA_000501675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/675/GCA_000501675.1_BorGarIPT89	-	IPT89
Streptococcus mutans TCI-143	1074122	PRJNA71995	71995	Terrabacteria group	Firmicutes	1.77631	37	-	AGKO01	157	1800	1681	10/6/11	3/22/17	Contig	JCVI	SAMN02436446	GCA_000228925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/925/GCA_000228925.2_SMUT4-NEX_11-143	-	TCI-143
Neisseria gonorrhoeae 35/02	528346	PRJNA32785	32785	Proteobacteria	Betaproteobacteria	2.13478	52.5	-	ABZG01	40	2364	2093	12/15/08	4/11/17	Scaffold	Broad Institute	SAMN02595239	GCA_000156775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/775/GCA_000156775.1_ASM15677v1	-	35/02
Pseudoalteromonas tunicata	314281	PRJNA196226	196226	Proteobacteria	Gammaproteobacteria	4.95944	39.9012	chromosome I:NZ_CP011032.1/CP011032.1; chromosome II:NZ_CP011033.1/CP011033.1	-	2	4338	4124	9/18/17	9/20/17	Complete Genome	Shandong University	SAMN03380230	GCA_002310815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/815/GCA_002310815.1_ASM231081v1	-	D2
Chlamydia psittaci 01DC11	1112252	PRJNA77077	77077	PVC group	Chlamydiae	1.30139	38.6	-	ATKP01	307	1127	1044	6/25/13	4/1/17	Scaffold	University of Maryland School of Medicine	SAMN00860202	GCA_000415525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/525/GCA_000415525.1_ASM41552v1	-	01DC11
Pseudoalteromonas issachenkonii	152297	PRJNA407902	407902	Proteobacteria	Gammaproteobacteria	3.44108	39.9	chromosome:CP023558.1	-	1	3202	3041	10/2/17	10/2/17	Complete Genome	Shanghai Ocean University	SAMN07666111	GCA_002407085.1	-	-	-	ECSMB14103
Streptococcus acidominimus	1326	PRJEB6403	251923	Terrabacteria group	Firmicutes	2.33081	39.9	chromosome 1:NZ_LT906454.1/LT906454.1	-	1	2321	2032	8/15/17	8/28/17	Complete Genome	SC	SAMEA4504048	GCA_900187245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/245/GCA_900187245.1_51470_D02	-	NCTC11291
Stenotrophomonas maltophilia	40324	PRJNA390911	390911	Proteobacteria	Gammaproteobacteria	4.80184	66.2	-	NJGC01	154	4461	4261	8/29/17	8/30/17	Scaffold	University of Houston	SAMN07253293	GCA_002277735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/735/GCA_002277735.1_ASM227773v1	-	DF07
Comamonas testosteroni	285	PRJNA218486	218486	Proteobacteria	Betaproteobacteria	5.60774	61.1	-	AWTP01	186	5197	4957	10/1/14	4/2/17	Contig	Huazhong Agricultural University	SAMN03085425	GCA_000761395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/395/GCA_000761395.1_CDF2v1	-	DF2
Bacillus mycoides	1405	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.19071	35.4	-	MUAN01	118	5427	5102	3/3/17	3/8/17	Contig	Cornell University	SAMN06242078	GCA_002021835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/835/GCA_002021835.1_ASM202183v1	-	FSL R5-0708
Yersinia frederiksenii	29484	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.75086	46.7	-	CQDU01	32	4428	4255	3/23/15	4/3/17	Scaffold	SC	SAMEA859970	GCA_001155565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/565/GCA_001155565.1_4840_6_2	-	3430
Bifidobacterium bifidum	1681	PRJNA263318	263318	Terrabacteria group	Actinobacteria	2.2225	62.8	-	JSDY01	6	1890	1675	6/5/15	4/10/17	Contig	University of Parma	SAMN03097403	GCA_001020275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/275/GCA_001020275.1_Bbif07v4	25523018	LMG 11582
Alteromonas macleodii	28108	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	3.1136	44.6	-	LUNN01	543	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534563	GCA_001626315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/315/GCA_001626315.1_ASM162631v1	27377622	-
Micrococcus luteus	1270	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.45027	73.2	-	JWEM01	171	2284	2122	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197022	GCA_001061825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/825/GCA_001061825.1_ASM106182v1	26230489	1058_MLUT
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12655	41.2	-	CWGA01	74	2043	1879	6/24/15	3/26/17	Contig	SC	SAMEA1032752	GCA_001175065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/065/GCA_001175065.1_6817_2_74	-	EQUI0027
Helicobacter pullorum	35818	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	1.63488	34.6	-	DCEZ01	31	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453772	GCA_002315025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/025/GCA_002315025.1_ASM231502v1	28894102	-
Haemophilus parasuis HPS10	1450514	PRJNA235355	235355	Proteobacteria	Gammaproteobacteria	2.2704	40	-	JDSO01	222	2250	2026	5/12/14	4/2/17	Contig	"Newport Laboratories, A Sanofi company"	SAMN02769537	GCA_000688815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/815/GCA_000688815.1_HparHPS10v1.0	25189591	HPS10
Bacillus simplex NBRC 15720 = DSM 1321	1349754	PRJNA348653	348653	Terrabacteria group	Firmicutes	5.64578	39.9	chromosome:NZ_CP017704.1/CP017704.1	-	1	5440	5158	8/8/17	8/10/17	Complete Genome	Kyungpook National University	SAMN05913072	GCA_002243645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/645/GCA_002243645.1_ASM224364v1	-	DSM 1321
Lactobacillus rhamnosus CASL	1078018	PRJNA72235	72235	Terrabacteria group	Firmicutes	2.86069	46.5	-	AFYD01	188	2735	2483	9/20/11	3/30/17	Scaffold	"The Institute of Microbiology, Chinese Academy of Sciences"	SAMN02471148	GCA_000226235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/235/GCA_000226235.1_ASM22623v1	22123765	CASL
Chlamydia abortus	83555	PRJNA390687	390687	PVC group	Chlamydiae	1.14436	39.9	chromosome:NZ_CP021996.1/CP021996.1	-	1	1031	925	6/22/17	6/24/17	Complete Genome	Lanzhou Veterinary Research Institute	SAMN07248967	GCA_002205755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/755/GCA_002205755.1_ASM220575v1	-	GN6
Vibrio splendidus ZF-90	617147	PRJNA167012	167012	Proteobacteria	Gammaproteobacteria	5.42226	44.2	-	AJZF02	183	4740	4590	6/25/12	4/5/17	Scaffold	Broad Institute	SAMN02470501	GCA_000272125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/125/GCA_000272125.2_ASM27212v2	22955834	ZF-90
Streptococcus pneumoniae	1313	PRJNA352462	352462	Terrabacteria group	Firmicutes	2.20664	39.9	chromosome:NZ_CP018136.1/CP018136.1	-	1	2415	2169	12/9/16	3/6/17	Complete Genome	Helmholtz-Centre for Infection Research	SAMN05981365	GCA_001896045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/045/GCA_001896045.1_ASM189604v1	-	SP49
Enterococcus casseliflavus	37734	PRJEB8303	276433	Terrabacteria group	Firmicutes	4.89429	44.7	-	CDRE01	2177	-	-	2/24/15	3/15/15	Contig	CGS-GL	SAMEA3218004	GCA_001373175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/175/GCA_001373175.1_1a6A_assembly	-	1a6A
Bacillus megaterium	1404	PRJNA395369	395369	Terrabacteria group	Firmicutes	5.78186	37.5	-	NQLQ01	348	5852	5607	8/29/17	8/30/17	Contig	Bielefeld University	SAMN07372672	GCA_002276335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/335/GCA_002276335.1_ASM227633v1	-	7503-1
Clostridium sporogenes	1509	PRJNA278445	278445	Terrabacteria group	Firmicutes	4.02196	28.3	-	LJTA01	86	3843	3533	11/17/15	4/4/17	Contig	Illinois Institute of Technology	SAMN03418523	GCA_001444655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/655/GCA_001444655.1_ASM144465v1	26519392	PA 3679
Streptococcus pneumoniae	1313	PRJNA353112	353112	Terrabacteria group	Firmicutes	2.07181	39.9	chromosome:NZ_CP018137.1/CP018137.1	-	1	2245	2008	12/9/16	3/6/17	Complete Genome	Helmholtz-Centre for Infection Research	SAMN06009945	GCA_001896065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/065/GCA_001896065.1_ASM189606v1	-	SP61
Bacteroides uniformis	820	PRJEB16550	349842	FCB group	Bacteroidetes/Chlorobi group	4.63499	46.5	-	FNPN01	52	3859	3713	10/22/16	4/5/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444418	GCA_900107315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/315/GCA_900107315.1_IMG-taxon_2693429911_annotated_assembly	-	DSM 6597
Treponema denticola F0402	699187	PRJNA42551	42551	Spirochaetes	Spirochaetia	2.74263	37.8	-	ADEC01	12	2654	2601	3/7/11	1/9/14	Scaffold	Broad Institute	SAMN02463845	GCA_000191825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/825/GCA_000191825.1_Trep_dent_F0402_V1	-	F0402
Bordetella bronchiseptica 3E44	1331200	PRJNA202112	202112	Proteobacteria	Betaproteobacteria	5.25595	68.1	-	JGWK01	104	5065	4896	5/1/14	4/2/17	Contig	JCVI	SAMN02263903	GCA_000662135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/135/GCA_000662135.1_gbb04v01	25908122	3.00E+44
Streptococcus pneumoniae	1313	PRJNA353116	353116	Terrabacteria group	Firmicutes	2.07311	39.9	chromosome:NZ_CP018138.1/CP018138.1	-	1	2249	2007	12/9/16	3/6/17	Complete Genome	Helmholtz-Centre for Infection Research	SAMN06009955	GCA_001896085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/085/GCA_001896085.1_ASM189608v1	-	SP64
Mesorhizobium loti	381	PRJNA399611	399611	Proteobacteria	Alphaproteobacteria	6.43698	63	-	NSFR01	38	6314	6018	9/12/17	9/14/17	Contig	Curtin University	SAMN07540853	GCA_002294705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/705/GCA_002294705.1_ASM229470v1	-	R7ANSx3859
Corynebacterium diphtheriae bv. mitis str. NC03529	1162302	PRJNA89613	89613	Terrabacteria group	Actinobacteria	2.48367	53.6	-	AJGI01	43	2432	2215	4/5/12	3/30/17	Contig	"Strathclyde Institute Of Pharmacy And Biomedical Sciences, University of Strathclyde, Glasgow"	SAMN02471955	GCA_000257885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/885/GCA_000257885.1_ASM25788v1	22628502	NC03529
[Haemophilus] ducreyi	730	PRJNA270894	270894	Proteobacteria	Gammaproteobacteria	1.63156	38.3	chromosome:CP011218.1	-	1	1595	1432	6/30/15	7/23/15	Chromosome	Indiana University School of Medicine	SAMN03271817	GCA_001043155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/155/GCA_001043155.1_ASM104315v1	-	CLU1
Streptococcus gordonii	1302	PRJNA280680	280680	Terrabacteria group	Firmicutes	2.18611	40.5	-	LAWM01	27	2112	2023	3/11/16	4/5/17	Contig	University of Malaya	SAMN03480689	GCA_001588975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/975/GCA_001588975.1_ASM158897v1	-	MW10
Chlamydia abortus	83555	PRJEB6923	338052	PVC group	Chlamydiae	1.14447	39.9	chromosome 1:NZ_LN554883.1/LN554883.1	-	1	1025	934	8/7/16	4/13/17	Complete Genome	WTSI	SAMEA1903256	GCA_900002505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/002/505/GCA_900002505.1_CA1H	-	1H
Yersinia enterocolitica	630	PRJNA243538	243538	Proteobacteria	Gammaproteobacteria	4.53331	47	-	JPDX01	2	4240	3928	9/16/14	3/24/17	Scaffold	Los Alamos National Laboratory	SAMN02887256	GCA_000754975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/975/GCA_000754975.1_YEA	25342679	YEA
Lactobacillus gasseri	1596	PRJNA324721	324721	Terrabacteria group	Firmicutes	2.09095	34.7	-	LZDT01	85	2168	1926	6/25/16	4/5/17	Contig	"R&D Center, Seoul Dairy Cooperative"	SAMN05185313	GCA_001676665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/665/GCA_001676665.1_ASM167666v1	-	505
Chlamydia abortus	83555	PRJEB6924	338051	PVC group	Chlamydiae	1.14447	39.9	chromosome 1:NZ_LN589721.1/LN589721.1	-	1	1025	934	8/7/16	4/13/17	Complete Genome	WTSI	SAMEA1903265	GCA_900002515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/002/515/GCA_900002515.1_1BCEVAC	-	AB7
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	3.9718	41.7	-	JJQD01	238	3433	3219	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708956	GCA_000979115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/115/GCA_000979115.1_gtlEnvA5udCFS	25756680	1.F.A.2.8
Anaplasma phagocytophilum str. Annie	1359151	PRJNA212493	212493	Proteobacteria	Alphaproteobacteria	1.51652	41.8	-	LAON01	15	1225	1079	3/27/15	4/3/17	Contig	IGS	SAMN02585077	GCA_000965125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/125/GCA_000965125.1_ASM96512v1	-	Annie
Leuconostoc mesenteroides subsp. mesenteroides	33967	PRJNA280516	280516	Terrabacteria group	Firmicutes	2.03609	37.5	-	LAYU01	85	2121	1923	7/21/15	4/3/17	Contig	University of Verona	SAMN03463665	GCA_001184255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/255/GCA_001184255.1_ASM118425v1	-	LbE16
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.15718	39.9	-	FQSX01	3	1055	956	5/10/17	5/24/17	Contig	WTSI	SAMEA1094362	GCA_900118805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/805/GCA_900118805.1_7067_6_68	-	10DC89
Lactobacillus acidophilus	1579	PRJNA407882	407882	Terrabacteria group	Firmicutes	2.04684	35.7	-	NXEY01	70	2111	2006	10/1/17	10/1/17	Contig	McGill University	SAMN07665576	GCA_002406675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/406/675/GCA_002406675.1_ASM240667v1	-	P2
Bartonella henselae	38323	PRJNA295147	295147	Proteobacteria	Alphaproteobacteria	1.8356	37.9	-	LOAD01	46	1679	1456	1/4/17	4/10/17	Contig	Anses UMR BIPAR	SAMN04286625	GCA_001932165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/165/GCA_001932165.1_ASM193216v1	-	A233
Helicobacter himalayensis	1591088	PRJNA316195	316195	Proteobacteria	delta/epsilon subdivisions	1.82994	39.9	chromosome:NZ_CP014991.1/CP014991.1	-	1	1752	1661	3/30/16	4/12/17	Complete Genome	China CDC	SAMN04578135	GCA_001602095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/095/GCA_001602095.1_ASM160209v1	-	YS1
Eubacterium sulci ATCC 35585	888727	PRJNA282954	282954	Terrabacteria group	Firmicutes	1.73938	39.9	chromosome:NZ_CP012068.1/CP012068.1	-	1	1654	1581	7/31/15	4/10/17	Complete Genome	The Forsyth Institute	SAMN03704030	GCA_001189495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/495/GCA_001189495.1_ASM118949v1	-	ATCC 35585
Mannheimia haemolytica serotype A2 str. BOVINE	669262	PRJNA40173	40173	Proteobacteria	Gammaproteobacteria	2.4788	41.1	-	ACZY01	84	2508	2351	10/14/09	3/30/17	Contig	Washington State University	SAMN02436661	GCA_000176275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/275/GCA_000176275.1_ASM17627v1	19966002	BOVINE
Lactobacillus brevis AG48	1384064	PRJNA214528	214528	Terrabacteria group	Firmicutes	2.59599	45.7	-	JAGR01	9	2660	2439	1/14/14	4/2/17	Contig	DOE Joint Genome Institute	SAMN02584991	GCA_000526755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/755/GCA_000526755.1_ASM52675v1	-	AG48
Mycoplasma gallisepticum	2096	PRJNA325637	325637	Terrabacteria group	Tenericutes	0.928154	31.6	-	MAFW01	94	767	662	6/24/16	4/5/17	Contig	University of Georgia	SAMN05256557	GCA_001676525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/525/GCA_001676525.1_ASM167652v1	-	K6112B
Chlamydia abortus	83555	PRJEB6919	266594	PVC group	Chlamydiae	1.14447	39.9	chromosome 1:NZ_LN554882.1/LN554882.1	-	1	1025	935	11/6/14	4/10/17	Complete Genome	WTSI	SAMEA1903252	GCA_000952935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/935/GCA_000952935.1_CAAB7	-	AB7
Burkholderia sp. KK1	1855726	PRJNA214105	214105	Proteobacteria	Betaproteobacteria	9.71595	63.0622	chromosome I:NZ_CP015999.1/CP015999.1; chromosome II:NZ_CP016000.1/CP016000.1; chromosome III:NZ_CP016001.1/CP016001.1; plasmid pkk1:NZ_CP016002.1/CP016002.1; plasmid pkk2:NZ_CP016003.1/CP016003.1; plasmid pkk3:NZ_CP016004.1/CP016004.1; plasmid pkk4:NZ_CP016005.1/CP016005.1; plasmid pkk5:NZ_CP016006.1/CP016006.1	-	8	9312	8912	2/6/17	4/17/17	Chromosome	Georgia Institute of Technology	SAMN05161775	GCA_001988975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/988/975/GCA_001988975.1_ASM198897v1	-	KK1
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.71246	67.2	-	LOWR01	77	6133	5825	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449239	GCA_001524025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/025/GCA_001524025.1_ASM152402v1	-	FL-5-2-10-S1-D0
Cutibacterium acnes	1747	PRJNA292487	292487	Terrabacteria group	Actinobacteria	2.53071	60	chromosome:NZ_CP012350.1/CP012350.1	-	1	2546	2386	12/18/15	4/4/17	Chromosome	None	SAMN03982898	GCA_001469555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/555/GCA_001469555.1_ASM146955v1	26857276	PA_30_2_L1
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.44803	32.7	-	CUHH01	80	2417	2300	3/31/15	3/26/17	Contig	SC	SAMEA1035134	GCA_001225225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/225/GCA_001225225.1_7068_7_62	-	115601
Mycoplasma bovis	28903	PRJNA306895	306895	Terrabacteria group	Tenericutes	0.939184	29.3	-	LQDP01	73	806	727	1/4/17	4/6/17	Contig	"University of California, Davis"	SAMN04366511	GCA_001930145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/145/GCA_001930145.1_ASM193014v1	-	2320MB
Proteus mirabilis	584	PRJNA278352	278352	Proteobacteria	Gammaproteobacteria	3.80662	38.5	-	LAGU01	35	3448	3303	3/30/16	4/5/17	Scaffold	BGI-Shenzhen	SAMN03418023	GCA_001604705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/705/GCA_001604705.1_ASM160470v1	-	C02011
Mycoplasma pneumoniae M29	1441379	PRJNA232505	232505	Terrabacteria group	Tenericutes	0.857799	39.9	chromosome:NZ_CP008895.1/CP008895.1	-	1	834	743	7/28/14	4/2/17	Complete Genome	National Natural Science Foundaton of China	SAMN02582400	GCA_000733995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/995/GCA_000733995.1_ASM73399v1	-	M29
Cronobacter sakazakii	28141	PRJNA251806	251806	Proteobacteria	Gammaproteobacteria	4.55513	56.8	-	JOLO01	87	4459	4187	10/9/15	4/4/17	Scaffold	"Nottingham Trent University, UK"	SAMN02840783	GCA_001309175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/175/GCA_001309175.1_ASM130917v1	26438044	693
Klebsiella oxytoca	571	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	6.02553	55	-	LEUT01	3	5750	5492	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280223	GCA_001030775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/775/GCA_001030775.1_Kleb_oxyt_MGH88_V1	-	MGH88
Clostridium beijerinckii	1520	PRJNA322804	322804	Terrabacteria group	Firmicutes	5.98292	29.6	-	LZZD01	245	5256	5048	2/23/17	2/25/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05170525	GCA_002006485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/485/GCA_002006485.1_ASM200648v1	-	BAS/B2
Lactobacillus salivarius	1624	PRJNA377666	377666	Terrabacteria group	Firmicutes	1.8076	32.7	-	NFHV01	45	1774	1652	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473742	GCA_002159345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/345/GCA_002159345.1_ASM215934v1	-	An63
Bacillus clausii	79880	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.37781	44.5	-	NPBX01	154	4338	4176	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372698	GCA_002272605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/605/GCA_002272605.1_assembly-7535-K_v1	-	7535-K
Moraxella catarrhalis	480	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	2.01781	45.3	-	JVLO01	39	1890	1782	7/10/15	4/3/17	Contig	University of Washington	SAMN03197514	GCA_001064535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/535/GCA_001064535.1_ASM106453v1	26230489	324_MCAT
Bacillus lehensis G1	1246626	PRJNA178137	178137	Terrabacteria group	Firmicutes	3.99307	39.9	chromosome:NZ_CP003923.1/CP003923.1	-	1	4024	3881	6/13/14	4/17/17	Complete Genome	Malaysia Genome Institute	SAMN03081443	GCA_000706725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/725/GCA_000706725.1_ASM70672v1	24811681	G1
Bifidobacterium breve CECT 7263	1036735	PRJNA67403	67403	Terrabacteria group	Actinobacteria	2.3144	58.9	-	AFVV01	34	2029	1852	2/16/12	3/30/17	Contig	Universidad Complutense de Madrid	SAMN02471362	GCA_000247755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/755/GCA_000247755.2_ASM24775v2	22740680	CECT 7263
Bacillus weihenstephanensis	86662	PRJNA318345	318345	Terrabacteria group	Firmicutes	5.64242	35.2	-	LXLY01	146	5920	5445	10/12/16	4/5/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04819590	GCA_001758015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/015/GCA_001758015.1_ASM175801v1	-	GOE13
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.22111	36.7	-	LPRJ01	9	2328	2232	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305144	GCA_001560085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/085/GCA_001560085.1_GG12_C01_10	-	GG12-C01-10
Streptococcus sanguinis SK49	888808	PRJNA53157	53157	Terrabacteria group	Firmicutes	2.2794	43	-	AFFO01	5	2290	2166	5/9/11	3/30/17	Scaffold	Baylor College of Medicine	SAMN00253323	GCA_000212815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/212/815/GCA_000212815.1_ASM21281v1	-	SK49
Staphylococcus saprophyticus	29385	PRJNA371450	371450	Terrabacteria group	Firmicutes	2.67576	33.1	-	MUXI01	20	2636	2463	3/1/17	3/3/17	Contig	Cork insitute of Technology	SAMN06299374	GCA_002009035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/035/GCA_002009035.1_ASM200903v1	-	DPC5671
Vibrio sp. J2-17	1507982	PRJEB5894	284700	Proteobacteria	Gammaproteobacteria	5.40853	44.6	-	CCKP01	92	4757	4640	5/20/15	4/10/17	Scaffold	STATION BIOLOGIQUE DE ROSCOFF	SAMEA2594035	GCA_001244075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/075/GCA_001244075.1_VRSK17v1_PRJEB5894	-	J2-17
Bacillus coagulans	1398	PRJNA276508	276508	Terrabacteria group	Firmicutes	3.44669	46.4	-	JZDH01	143	3474	3236	3/2/16	7/3/17	Contig	CSIR-Institute of Microbial Technology	SAMN03377049	GCA_001578455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/455/GCA_001578455.1_ASM157845v1	27103709	Unique IS-2
Paenibacillus polymyxa 1-43	1333863	PRJNA202958	202958	Terrabacteria group	Firmicutes	5.9717	44.7	-	ASRZ01	241	5436	5074	1/15/14	4/2/17	Contig	China Agricultural University	SAMN02597336	GCA_000520795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/795/GCA_000520795.1_s143	-	Jan-43
Yersinia intermedia	631	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.67263	47.8	-	CVJX01	45	4295	4087	4/2/15	4/10/17	Scaffold	SC	SAMEA859943	GCA_001319925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/925/GCA_001319925.1_4821_5_1	-	FCF130
Pseudomonas stutzeri TS44	477228	PRJNA162447	162447	Proteobacteria	Gammaproteobacteria	4.27882	64.4	-	AJXE01	78	4091	3893	5/21/12	5/19/17	Contig	Huazhong Agricultural University	SAMN02469903	GCA_000263395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/395/GCA_000263395.1_ASM26339v1	22843599	TS44
Aeromonas hydrophila SNUFPC-A8	1232673	PRJNA175471	175471	Proteobacteria	Gammaproteobacteria	4.96909	60.8	-	AMQA01	41	4653	4477	11/29/12	5/18/17	Contig	Seoul National University	SAMN02470915	GCA_000315835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/835/GCA_000315835.1_De_Novo_2.6	23405367	SNUFPC-A8
Propionibacterium freudenreichii	1744	PRJEB6432	270196	Terrabacteria group	Actinobacteria	2.6147	67.2	-	CCYP01	78	2294	2169	12/11/14	4/4/17	Scaffold	INRA STLO	SAMEA2822393	GCA_900000055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/000/055/GCA_900000055.1_CIRM-BIA122	-	CIRM-BIA 122
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.70236	67.2	-	LOTO01	112	6988	6630	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449150	GCA_001522275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/275/GCA_001522275.1_ASM152227v1	-	RF32-BP6
Campylobacter concisus	199	PRJNA280463	280463	Proteobacteria	delta/epsilon subdivisions	2.10515	39.4	-	NDYN01	44	2144	2059	6/4/17	6/6/17	Contig	ESR	SAMN03457015	GCA_002165815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/815/GCA_002165815.1_ASM216581v1	-	CCUG 19995
Finegoldia magna	1260	PRJNA383659	383659	Terrabacteria group	Firmicutes	1.82251	32	-	NDYJ01	33	1743	1660	8/7/17	8/9/17	Contig	Aarhus University	SAMN06769901	GCA_002243235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/235/GCA_002243235.1_ASM224323v1	-	07T609
Flavobacterium psychrophilum	96345	PRJNA262168	262168	FCB group	Bacteroidetes/Chlorobi group	2.52137	32.9	-	JRWF01	123	2251	2087	12/16/14	4/2/17	Contig	Washington State University	SAMN03081592	GCA_000801715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/715/GCA_000801715.1_ASM80171v1	26377311	TR
Clostridium butyricum	1492	PRJNA261798	261798	Terrabacteria group	Firmicutes	4.40702	28.5	-	JRMA01	231	-	-	10/9/14	12/1/14	Contig	UFRJ	SAMN03076115	GCA_000765285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/285/GCA_000765285.1_ASM76528v1	25414496	INCQS635
Akkermansia muciniphila	239935	PRJEB21068	396410	PVC group	Verrucomicrobia	2.67417	55.7	-	FXXZ01	188	2328	2244	7/29/17	8/7/17	Scaffold	"WAGENINGEN UNIVERSITY, LABORATORY OF SYSTEMS AND SYNTHETIC BIOLOGY."	SAMEA104102604	GCA_900185045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/045/GCA_900185045.1_Elephant.fasta	-	-
Rhodococcus erythropolis	1833	PRJNA343352	343352	Terrabacteria group	Actinobacteria	7.09353	62.3	-	MJVD01	112	6657	6387	4/13/17	9/18/17	Scaffold	University of Tasmania	SAMN05787336	GCA_002091935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/935/GCA_002091935.1_ASM209193v1	-	1159
Lactobacillus johnsonii	33959	PRJNA316010	316010	Terrabacteria group	Firmicutes	1.87183	34.5	-	NIBC01	100	1884	1680	8/25/17	8/28/17	Contig	University of Minnesota	SAMN04573219	GCA_002270045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/270/045/GCA_002270045.1_ASM227004v1	-	UMNLJ95
Lactobacillus sakei	1599	PRJNA343164	343164	Terrabacteria group	Firmicutes	1.99257	41	-	MKGB01	67	2020	1884	2/1/17	4/10/17	Scaffold	ETH Zurich	SAMN05717731	GCA_001981795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/795/GCA_001981795.1_ASM198179v1	-	RI-409
Escherichia albertii	208962	PRJDB3047	301492	Proteobacteria	Gammaproteobacteria	4.7833	49.6	-	BBVM01	94	4824	4466	11/6/15	2/25/17	Scaffold	University of Miyazaki	SAMD00026647	GCA_001514725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/725/GCA_001514725.1_ASM151472v1	26537224	NIAH_Bird_24
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.80748	47.6	-	MDZU01	114	3541	3364	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320396	GCA_001882715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/715/GCA_001882715.1_ASM188271v1	-	93/1038-1
Streptococcus equinus	1335	PRJNA245446	245446	Terrabacteria group	Firmicutes	1.84624	37	-	JPGC01	8	1808	1723	7/18/14	7/3/17	Scaffold	Universidade Federal de Vicosa	SAMN02737436	GCA_000731085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/085/GCA_000731085.1_ASM73108v1	25745007	HC5
Pectobacterium carotovorum	554	PRJNA265921	265921	Proteobacteria	Gammaproteobacteria	4.15156	51.2	-	JSXC01	105	3825	3635	12/17/14	4/2/17	Contig	University of Malaya	SAMN03154070	GCA_000803215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/215/GCA_000803215.1_ASM80321v1	25676763	M022
Mycobacterium kansasii	1768	PRJNA368836	368836	Terrabacteria group	Actinobacteria	6.8017	66.1	-	MVBN01	21	6249	4082	2/17/17	4/10/17	Contig	"Institute for Genome Sciences, University of Maryland, Baltimore"	SAMN06273888	GCA_002003585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/003/585/GCA_002003585.1_ASM200358v1	-	Nov-69
Brachyspira hyodysenteriae	159	PRJNA272555	272555	Spirochaetes	Spirochaetia	3.02393	27	-	JXNL01	155	2631	2516	5/26/15	4/3/17	Scaffold	Murdoch University	SAMN03285454	GCA_001013085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/013/085/GCA_001013085.1_ASM101308v1	26098837	NSW5
Lactobacillus crispatus	47770	PRJNA290636	290636	Terrabacteria group	Firmicutes	2.33212	36.8	-	LJON01	255	2443	2193	1/26/16	4/4/17	Contig	Vaginal Microbiome Consortium	SAMN03893606	GCA_001541585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/585/GCA_001541585.1_ASM154158v1	26747455	VMC8
Aggregatibacter actinomycetemcomitans serotype e str. ANH9776	1434265	PRJNA230866	230866	Proteobacteria	Gammaproteobacteria	1.90561	45.9	-	AZTZ01	590	1883	1678	3/23/16	4/5/17	Contig	"Bumgarner laboratory, Department of Microbiology, University of Washington"	SAMN04573004	GCA_001596315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/315/GCA_001596315.1_ANH9776v1.0	-	ANH9776
Rothia mucilaginosa	43675	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.24481	59.6	-	JVFT01	10	1767	1683	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197665	GCA_001065115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/115/GCA_001065115.1_ASM106511v1	26230489	470_RMUC
Gardnerella vaginalis JCP7719	1261061	PRJNA181316	181316	Terrabacteria group	Actinobacteria	1.56315	42	-	ATJO01	145	1367	1194	6/25/13	4/10/17	Scaffold	Washington University	SAMN02436711	GCA_000414625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/625/GCA_000414625.1_ASM41462v1	-	JCP7719
Lactobacillus paracasei subsp. paracasei Lpp223	1256224	PRJNA178453	178453	Terrabacteria group	Firmicutes	3.05211	46.2	-	ANML01	168	3207	2990	6/11/13	4/1/17	Contig	Danone Research	SAMN02469706	GCA_000409955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/955/GCA_000409955.1_L.paracasei_Lpp223.v.1	23894338	Lpp223
Staphylococcus hominis	1290	PRJNA316783	316783	Terrabacteria group	Firmicutes	2.20516	31.4	-	LWJP01	145	2198	2063	11/10/16	4/10/17	Contig	CSIR-Institute of Microbial Technology	SAMN04590065	GCA_001876405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/405/GCA_001876405.1_ASM187640v1	-	RE2.8
Staphylococcus capitis	29388	PRJEB8618	278837	Terrabacteria group	Firmicutes	2.50859	32.8	-	CTEM01	38	2407	2309	3/25/15	4/3/17	Contig	Department of Biosecurity PCL3	SAMEA3271079	GCA_001201015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/015/GCA_001201015.1_CR04	-	CR04
Staphylococcus warneri	1292	PRJNA316783	316783	Terrabacteria group	Firmicutes	2.57748	32.6	-	LWJM01	115	2514	2382	11/10/16	4/5/17	Contig	CSIR-Institute of Microbial Technology	SAMN04590061	GCA_001876395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/395/GCA_001876395.1_ASM187639v1	-	RE1.51
Acinetobacter radioresistens	40216	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.43425	42.1	-	DCZR01	152	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454689	GCA_002331905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/905/GCA_002331905.1_ASM233190v1	28894102	-
Rhodococcus hoagii	43767	PRJNA316970	316970	Terrabacteria group	Actinobacteria	5.19971	68.8	-	LWTX01	37	4850	4735	4/17/17	6/6/17	Contig	The University of Edinburgh	SAMN04880536	GCA_002094305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/305/GCA_002094305.1_ASM209430v1	27638249	DSM 20307
Bacillus atrophaeus BACI051-E	882455	PRJNA48615	48615	Terrabacteria group	Firmicutes	4.12706	43.1	-	AEFX01	35	4208	4012	4/19/11	6/15/17	Contig	Transformational Medical Technologies Program	SAMN01816425	GCA_000204885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/885/GCA_000204885.2_ASM20488v2	21464989	BACI051-E
Klebsiella variicola	244366	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.76542	57.2	-	LFBA01	2	5795	5480	6/19/15	7/29/17	Scaffold	Broad Institute	SAMN03280414	GCA_001034045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/045/GCA_001034045.1_Kleb_pneu_BIDMC88_V1	-	BIDMC88
Acinetobacter nosocomialis	106654	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	4.03019	38.6	-	BBTV01	116	3978	3768	2/20/15	4/3/17	Contig	National Institute of Technology and Evaluation	SAMD00020343	GCA_000949695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/695/GCA_000949695.1_ASM94969v1	-	NBRC 110499
Streptomyces griseus	1911	PRJEB16483	349373	Terrabacteria group	Actinobacteria	8.63019	72.2	-	FNTW01	4	7320	7018	10/22/16	3/14/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04490359	GCA_900105705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/705/GCA_900105705.1_IMG-taxon_2634166340_annotated_assembly	-	DSM 40236
Streptococcus oralis ATCC 35037	655813	PRJNA50777	50777	Terrabacteria group	Firmicutes	1.88471	41.3	-	AEDW01	25	1880	1728	9/24/10	3/30/17	Contig	University of Maryland	SAMN02435816	GCA_000148565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/565/GCA_000148565.2_ASM14856v1	-	ATCC 35037
Achromobacter xylosoxidans	85698	PRJNA285410	285410	Proteobacteria	Betaproteobacteria	6.50403	67.8	-	LDVO01	295	6056	5802	8/31/15	4/4/17	Contig	University of Queensland	SAMN03753633	GCA_001276315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/315/GCA_001276315.1_ASM127631v1	-	A13
Xanthomonas fuscans subsp. fuscans	366649	PRJNA272630	272630	Proteobacteria	Gammaproteobacteria	5.1527	64.7	-	JXLW02	189	4658	4085	1/23/15	4/11/17	Contig	University of Exeter	SAMN03284618	GCA_000827985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/827/985/GCA_000827985.2_X631v2	26500625	XCP631
Pseudomonas syringae pv. tomato Max13	673198	PRJNA40343	40343	Proteobacteria	Gammaproteobacteria	6.10507	58.7	-	ADFZ01	349	5826	5524	1/25/10	5/19/17	Contig	Virginia Tech	SAMN02472093	GCA_000177475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/475/GCA_000177475.1_ASM17747v1	-	Max13
Pseudomonas savastanoi pv. glycinea	318	PRJNA285209	285209	Proteobacteria	Gammaproteobacteria	6.2135	57.6	-	LGLM01	128	5669	5141	9/18/15	4/4/17	Scaffold	University of Toronto	SAMN03837733	GCA_001293765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/765/GCA_001293765.1_PgyLN10	-	LN10
Acinetobacter calcoaceticus	471	PRJNA307999	307999	Proteobacteria	Gammaproteobacteria	3.74264	38.6	-	LQMV01	28	3514	3348	1/11/16	4/10/17	Contig	Thompson Rivers University	SAMN04386095	GCA_001510805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/805/GCA_001510805.1_ASM151080v1	-	GK2
Pseudoalteromonas sp. NJ631	493915	PRJNA168459	168459	Proteobacteria	Gammaproteobacteria	5.3499	43.4	-	AKXJ01	55	4660	4467	7/9/12	5/19/17	Contig	Ningbo University	SAMN02470699	GCA_000276645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/645/GCA_000276645.1_ASM27664v1	-	NJ631
Vibrio alginolyticus	663	PRJNA272353	272353	Proteobacteria	Gammaproteobacteria	5.18402	44.6	-	JXIO01	114	4799	4663	2/9/15	4/3/17	Contig	University of Malaya	SAMN03280974	GCA_000834085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/085/GCA_000834085.1_ASM83408v1	-	BSW15
Pediococcus acidilactici	1254	PRJNA309020	309020	Terrabacteria group	Firmicutes	1.78432	42.5	-	LRBW01	75	1723	1526	5/6/16	4/5/17	Contig	ICAR-National Research Centre on Camel	SAMN04419358	GCA_001638245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/245/GCA_001638245.1_ASM163824v1	-	NRCC3
Streptococcus salivarius CCHSS3	1048332	PRJEA67173	67173	Terrabacteria group	Firmicutes	2.21718	39.9	chromosome:NC_015760.1/FR873481.1	-	1	2096	1937	6/27/11	3/30/17	Complete Genome	Institut National de la Recherche Agronomique (INRA)	SAMEA2272545	GCA_000253335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/335/GCA_000253335.1_ASM25333v1	-	CCHSS3
Enterobacter asburiae	61645	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.0196	55.6	-	LEDH01	70	4971	4743	6/9/15	4/3/17	Contig	JCVI	SAMN03732723	GCA_001022765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/765/GCA_001022765.1_ASM102276v1	-	GN02709
Brucella sp. BO2	693750	PRJNA41857	41857	Proteobacteria	Alphaproteobacteria	3.30594	57.2	-	ADFA01	174	3336	3112	9/3/10	4/17/17	Contig	"Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA"	SAMN02472084	GCA_000177135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/135/GCA_000177135.1_ASM17713v1	-	BO2
Pseudomonas amygdali pv. tabaci	322	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	6.2394	58	-	LJRL01	170	5785	5492	10/20/15	4/4/17	Scaffold	University of Toronto	SAMN03976270	GCA_001401095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/095/GCA_001401095.1_PtaICMP2835	-	ICMP2835
Xanthomonas euvesicatoria	456327	PRJNA254447	254447	Proteobacteria	Gammaproteobacteria	4.88616	65.1	-	JPUN02	54	4365	4069	10/21/15	4/5/17	Contig	Institute for Agricultural and Fisheries Research (ILVO)	SAMN02903991	GCA_001401675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/675/GCA_001401675.2_ASM140167v2	-	LMG 12749
Acinetobacter pittii	48296	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	4.01342	38.5	-	BBTQ01	95	3890	3688	2/17/15	4/3/17	Contig	National Institute of Technology and Evaluation	SAMD00020348	GCA_000931895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/895/GCA_000931895.1_ASM93189v1	-	NBRC 110504
Riemerella anatipestifer	34085	PRJNA309226	309226	FCB group	Bacteroidetes/Chlorobi group	2.13824	35	-	LUDJ01	30	2010	1934	6/20/16	4/5/17	Contig	Sichuan Agricultural University	SAMN04427039	GCA_001670625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/670/625/GCA_001670625.1_RCAD0125	-	RCAD0125
Staphylococcus lugdunensis UCIM6116	1409679	PRJNA224001	224001	Terrabacteria group	Firmicutes	2.55438	33.6	-	JBHB01	47	2440	2347	2/4/14	4/2/17	Scaffold	Broad Institute	SAMN02381740	GCA_000542395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/395/GCA_000542395.1_Stap_lugd_UCIM6116_V1	-	UCIM6116
Streptococcus anginosus	1328	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.81227	38.8	-	JWDR01	32	1750	1629	7/10/15	4/3/17	Contig	University of Washington	SAMN03197043	GCA_001070115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/115/GCA_001070115.1_ASM107011v1	26230489	1080_SANG
Pantoea ananatis	553	PRJEB7513	270272	Proteobacteria	Gammaproteobacteria	4.48322	54.1	-	CVNH01	61	4176	3965	4/21/15	4/4/17	Contig	AUSTRIAN INSTITUTE OF TECHNOLOGY	SAMEA3303365	GCA_001369395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/369/395/GCA_001369395.1_Pantoea_ananatis_S8	-	S8
Streptococcus gallolyticus	315405	PRJEB16875	351008	Terrabacteria group	Firmicutes	2.19284	37.4	-	FOBM01	25	2181	2072	10/29/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487839	GCA_900109835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/835/GCA_900109835.1_IMG-taxon_2606217753_annotated_assembly	-	VTM1R29
Leptospira santarosai serovar Shermani str. 1342KT	1242989	PRJNA178172	178172	Spirochaetes	Spirochaetia	3.98781	41.8	-	AOHB02	68	3998	3623	1/18/13	4/11/17	Contig	J. Craig Venter Institute	SAMN02436395	GCA_000332395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/395/GCA_000332395.2_gls454048v02	-	1342KT
Citrobacter freundii	546	PRJNA295803	295803	Proteobacteria	Gammaproteobacteria	4.89635	52	-	LJSQ01	6	4810	4517	10/23/15	4/4/17	Scaffold	"Graduate School at Shenzhen, Tsinghua University"	SAMN04088747	GCA_001411885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/885/GCA_001411885.1_ASM141188v1	26697383	ST2
Fusobacterium necrophorum subsp. funduliforme	143387	PRJNA315619	315619	Fusobacteria	Fusobacteriia	2.13737	35.2	-	LVES01	32	2059	1923	3/25/16	4/10/17	Contig	Aarhus University	SAMN04569323	GCA_001597335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/335/GCA_001597335.1_ASM159733v1	-	LS_1272
Streptococcus parasanguinis	1318	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.26867	41.5	-	JVSR01	114	2224	2133	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197329	GCA_001069785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/785/GCA_001069785.1_ASM106978v1	26230489	139.rep2_SPAR
Agrobacterium sp. YIC 4121	1923829	PRJNA355336	355336	Proteobacteria	Alphaproteobacteria	5.01774	59.8	-	MRDI01	27	4891	4708	2/28/17	3/2/17	Contig	"Northeast institute of Geography and Agroecology, Chinese Academy of Sciences"	SAMN06091697	GCA_002008205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/008/205/GCA_002008205.1_ASM200820v1	-	YIC 4121
Haemophilus parainfluenzae	729	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	2.0016	39.4	-	JUTJ01	36	1990	1845	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197987	GCA_001058435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/435/GCA_001058435.1_ASM105843v1	26230489	777_HPAR
Actinomyces oris	544580	PRJNA347929	347929	Terrabacteria group	Actinobacteria	2.96688	68.3	-	MSKJ01	45	2533	2403	1/5/17	4/6/17	Scaffold	King's College London	SAMN05898730	GCA_001937675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/675/GCA_001937675.1_ASM193767v1	-	CCUG 33920
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.95737	55	-	JTCD02	79	4910	4670	11/17/14	3/25/17	Contig	JCVI	SAMN03012828	GCA_000784115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/115/GCA_000784115.2_SPADES_assembly_of_Enterobacter_cloacae_ND21	-	ND21
Vibrio anguillarum	55601	PRJNA267079	267079	Proteobacteria	Gammaproteobacteria	4.20511	44.635	chromosome I:CP010034.1; chromosome II:CP010035.1; plasmid pJM1:CP016256.1	-	3	3619	3489	2/7/17	2/7/17	Chromosome	University of Copenhagen	SAMN03177582	GCA_001989735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/735/GCA_001989735.1_ASM198973v1	-	91-8-178
Streptococcus parauberis	1348	PRJNA344519	344519	Terrabacteria group	Firmicutes	2.52126	35.4	-	MLCP01	13	2547	2321	10/31/16	4/5/17	Scaffold	      Lanzhou Institute of Husbandry and Pharmaceutical Sciences of CAAS 	SAMN05817777	GCA_001870975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/975/GCA_001870975.1_ASM187097v1	-	SP-llh
Kingella kingae KK145	1305593	PRJEB1617	194502	Proteobacteria	Betaproteobacteria	1.99119	46.8	-	CBSI01	1	2018	1807	9/11/13	4/2/17	Scaffold	URMITE	SAMEA2272028	GCA_000470155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/155/GCA_000470155.1_KK145	-	KK145
Streptococcus pseudopneumoniae	257758	PRJNA294729	294729	Terrabacteria group	Firmicutes	2.2633	39.8	-	LJHK01	188	2434	2107	9/30/15	4/4/17	Contig	Aarhus University	SAMN04031595	GCA_001304565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/565/GCA_001304565.1_ASM130456v1	27100044	61-14
Xanthomonas perforans	442694	PRJNA276658	276658	Proteobacteria	Gammaproteobacteria	5.14328	64.9	-	JZVT01	96	4706	4347	5/18/15	4/3/17	Contig	Universidade de Sao Paulo	SAMN03379529	GCA_001010015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/015/GCA_001010015.1_ASM101001v1	26089818	GEV968
Streptobacillus moniliformis	34105	PRJNA319313	319313	Fusobacteria	Fusobacteriia	1.57775	26.2	-	LWTD01	155	1459	1342	6/4/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04892743	GCA_001657715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/715/GCA_001657715.1_ASM165771v1	-	Kun 3 (RIVM)
Klebsiella aerogenes MGH 62	1439321	PRJNA234261	234261	Proteobacteria	Gammaproteobacteria	5.29901	54.9	-	JMUM01	4	5162	4934	5/19/14	4/10/17	Scaffold	Broad Institute	SAMN02581394	GCA_000692175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/175/GCA_000692175.1_Ente_aero_MGH_62_V1	-	MGH 62
Leuconostoc pseudomesenteroides	33968	PRJNA352459	352459	Terrabacteria group	Firmicutes	2.02255	39	-	MPLF01	101	2113	1923	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981461	GCA_002092535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/535/GCA_002092535.1_ASM209253v1	28217118	BM2
Corynebacterium ulcerans	65058	PRJNA341832	341832	Terrabacteria group	Actinobacteria	2.54111	53.4	-	MIOS01	31	2346	2242	11/10/16	4/5/17	Contig	National Institute for Communicable Diseases	SAMN05729438	GCA_001876325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/325/GCA_001876325.1_ASM187632v1	-	KZN-2016-48390
Aeromonas veronii	654	PRJNA296464	296464	Proteobacteria	Gammaproteobacteria	4.68124	58.6	-	LKKA01	50	4347	4122	11/19/15	4/4/17	Contig	Texas Tech University	SAMN04099661	GCA_001446735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/735/GCA_001446735.1_ASM144673v1	26824353	TTU2014-134AME
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.26384	64.1	-	FVCE01	14	5301	5137	3/10/17	3/18/17	Contig	SC	SAMEA2070541	GCA_900131125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/125/GCA_900131125.1_10665_3_57	-	227
Leptospira weilii str. LNT 1194	1088543	PRJNA74241	74241	Spirochaetes	Spirochaetia	4.24984	40.7	-	AHQX01	367	4143	3868	2/3/12	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00739393	GCA_000246635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/635/GCA_000246635.2_CLC_glsol171	-	LNT 1194
Gallibacterium anatis	750	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.59749	39.7	-	JPJP01	111	2490	2322	11/5/14	4/2/17	Contig	University of Copenhagen	SAMN02900748	GCA_000772345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/345/GCA_000772345.1_ASM77234v1	-	23T10
Mycobacterium colombiense	339268	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.7803	67.5	-	MBEP01	108	5517	5292	1/18/17	4/6/17	Contig	JCVI	SAMN04634277	GCA_001954115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/115/GCA_001954115.1_ASM195411v1	-	IS-576
Mycobacterium africanum MAL010120	1354177	PRJNA211661	211661	Terrabacteria group	Actinobacteria	4.38	65.6	-	JLAB01	3	4243	4040	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02231128	GCA_000666645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/645/GCA_000666645.1_Myco_afri_MAL010120_V1	-	MAL010120
Pantoea agglomerans	549	PRJNA315986	315986	Proteobacteria	Gammaproteobacteria	4.81358	55.3	-	LVHW01	4	4536	4336	3/25/16	4/5/17	Scaffold	Agriculture and Agri-Food Canada	SAMN04572589	GCA_001597625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/625/GCA_001597625.1_ASM159762v1	27313290	3
Vibrio nigripulchritudo SFn27	1238446	PRJEB559	222441	Proteobacteria	Gammaproteobacteria	6.46799	45.6995	plasmid VIBNISFn27_p2:NZ_CAOB01000122.1/CAOB01000122.1	CAOB01	122	5798	5698	10/1/13	4/3/17	Scaffold	Genoscope CEA	SAMEA3146260	GCA_001050695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/695/GCA_001050695.1_ASM105069v1	23739050	SFn27
Burkholderia cepacia	292	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	8.60878	66.6	-	JWAD01	1071	8346	7499	7/10/15	4/3/17	Contig	University of Washington	SAMN03197135	GCA_001052915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/915/GCA_001052915.1_ASM105291v1	26230489	1178_BCEN
Enterococcus hirae	1354	PRJNA342049	342049	Terrabacteria group	Firmicutes	3.01834	36.6	-	MJDW01	71	2881	2656	4/3/17	4/5/17	Contig	Lethbridge Research Centre	SAMN05735020	GCA_002077465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/465/GCA_002077465.1_ASM207746v1	28270110	F0321D 142
Streptococcus pneumoniae SPN034156	869303	PRJNA50793	50793	Terrabacteria group	Firmicutes	2.02448	39.9	chromosome:NC_021006.1/FQ312045.1	-	1	2220	1963	7/29/10	9/18/17	Complete Genome	Wellcome Trust Sanger Institute	SAMEA3138389	GCA_000210995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/995/GCA_000210995.1_ASM21099v1	"2,103,447,424,130,500"	SNP034156
Morganella morganii	582	PRJNA376739	376739	Proteobacteria	Gammaproteobacteria	3.65273	51.2	-	MWUD01	174	3429	3297	4/3/17	4/5/17	Contig	University of Central Florida	SAMN06446189	GCA_002077705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/705/GCA_002077705.1_ASM207770v1	-	AV1
Streptococcus sobrinus TCI-107	1074066	PRJNA71901	71901	Terrabacteria group	Firmicutes	2.13689	43.4	-	AGGP01	283	2153	1933	10/6/11	3/30/17	Contig	JCVI	SAMN02436342	GCA_000228065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/065/GCA_000228065.2_SMUT1-NEX_34-107	-	TCI-107
Geobacillus sp. 44B	1963023	PRJNA354604	354604	Terrabacteria group	Firmicutes	3.54318	44.6	-	NADP01	284	3628	3299	4/3/17	4/5/17	Contig	"Jet Propulsion Laboratory, California Institute of Technology"	SAMN06347028	GCA_002077755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/755/GCA_002077755.1_ASM207775v1	-	44B
Actinomyces naeslundii	1655	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.15111	67.8	-	MSRU01	47	2681	2548	1/18/17	4/6/17	Scaffold	King's College London	SAMN05898698	GCA_001956565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/565/GCA_001956565.1_ASM195656v1	-	CCUG 35334
Mycobacterium chelonae	1774	PRJNA347845	347845	Terrabacteria group	Actinobacteria	5.20106	64	-	MLIO01	21	5083	4941	10/26/16	4/5/17	Contig	University of Georgia	SAMN05897996	GCA_001853885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/885/GCA_001853885.1_ASM185388v1	-	15513
Vibrio campbellii	680	PRJNA265005	265005	Proteobacteria	Gammaproteobacteria	5.65222	45.5	-	JSFE01	60	5213	5038	11/6/14	4/2/17	Contig	Monash University Malaysia	SAMN03145036	GCA_000772655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/655/GCA_000772655.1_ASM77265v1	25814609	UMTGB204
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28334	32.4	chromosome:AP017597.1	-	1	-	-	1/24/17	1/27/17	Chromosome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053868	GCA_002356795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/795/GCA_002356795.1_ASM235679v1	-	M14024
Leclercia adecarboxylata	83655	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.7387	55.7	-	DCZV01	35	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454687	GCA_002331365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/365/GCA_002331365.1_ASM233136v1	28894102	-
Campylobacter lanienae	75658	PRJNA340988	340988	Proteobacteria	delta/epsilon subdivisions	1.5275	34.6	-	MJJB01	28	1571	1492	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687008	GCA_002139215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/215/GCA_002139215.1_ASM213921v1	28854596	P0006
Acinetobacter ursingii	108980	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.79365	40.1	-	DGJA01	170	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454889	GCA_002386595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/595/GCA_002386595.1_ASM238659v1	28894102	-
Rhodococcus fascians LMG 3616	1443903	PRJNA233522	233522	Terrabacteria group	Actinobacteria	5.75832	64.4	-	JMEO01	42	5455	5283	9/30/14	4/2/17	Scaffold	Oregon State University	SAMN02570002	GCA_000761035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/035/GCA_000761035.1_R_fas_LMG3616	-	LMG 3616
Chlamydia abortus S26/3	218497	PRJNA355	355	PVC group	Chlamydiae	1.14438	39.9	chromosome:NC_004552.2/CR848038.1	-	1	1028	935	3/5/03	5/28/17	Complete Genome	Sanger Institute	SAMEA1705924	GCA_000026025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/025/GCA_000026025.1_ASM2602v1	15837807	S26/3
Leptospira kirschneri serovar Bulgarica str. Nikolaevo	1240687	PRJNA177126	177126	Spirochaetes	Spirochaetia	4.48938	36.3	-	ANCE01	221	4184	3751	3/15/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01798240	GCA_000347235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/235/GCA_000347235.1_gls454008v01	-	Nikolaevo
Salinispora pacifica DSM 45547	1050199	PRJNA86079	86079	Terrabacteria group	Actinobacteria	5.44721	69.8	-	ARTO01	2	4979	4712	4/26/13	4/1/17	Scaffold	JGI	SAMN02261318	GCA_000383575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/575/GCA_000383575.1_ASM38357v1	-	DSM 45547
Xanthomonas arboricola	56448	PRJNA275695	275695	Proteobacteria	Gammaproteobacteria	5.03201	65.5	-	JZEI01	6	4405	4149	5/27/15	4/3/17	Scaffold	INRA	SAMN03352187	GCA_001013505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/013/505/GCA_001013505.1_ASM101350v1	-	CFBP 7651
Pseudomonas psychrotolerans	237610	PRJEB15680	347457	Proteobacteria	Gammaproteobacteria	5.7318	65.6	-	FMWB01	61	5383	5222	10/17/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216279	GCA_900102665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/665/GCA_900102665.1_IMG-taxon_2663763601_annotated_assembly	-	DSM 15758
Elizabethkingia anophelis R26	1246994	PRJNA178189	178189	FCB group	Bacteroidetes/Chlorobi group	4.03272	35.4	-	ANIW01	66	3746	3643	1/15/13	3/31/17	Contig	Stockholm University	SAMN02470677	GCA_000331815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/815/GCA_000331815.1_ASM33181v1	24309745	R26
Pseudoalteromonas luteoviolacea	43657	PRJNA257109	257109	Proteobacteria	Gammaproteobacteria	6.07036	42.2	-	JWIC01	10	5216	4938	1/5/15	4/2/17	Scaffold	University of Hawaii at Manoa	SAMN02947394	GCA_000814765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/765/GCA_000814765.1_ASM81476v1	25700414	HI1
Pseudomonas fragi	296	PRJNA397499	397499	Proteobacteria	Gammaproteobacteria	4.9769	59.7	-	NQKV01	52	4572	4432	8/24/17	8/27/17	Scaffold	CSIRO Agriculture and Food	SAMN07459801	GCA_002269585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/585/GCA_002269585.1_ASM226958v1	-	F1786
Vibrio cyclitrophicus ZF30	1136168	PRJNA81881	81881	Proteobacteria	Gammaproteobacteria	5.03355	43.5	-	AIDJ02	84	4473	4320	3/26/12	4/5/17	Scaffold	Massachusetts Institute of Technology	SAMN02470482	GCA_000256305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/305/GCA_000256305.2_ASM25630v2	22491847	ZF30
Enterococcus cecorum	44008	PRJNA268097	268097	Terrabacteria group	Firmicutes	2.2613	36.6	chromosome:CP010060.1	-	1	-	-	10/16/15	10/16/15	Chromosome	NC State University	SAMN03203012	GCA_001318225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/225/GCA_001318225.1_ASM131822v1	-	SA1
Pseudomonas chlororaphis subsp. piscium	1513890	PRJNA290438	290438	Proteobacteria	Gammaproteobacteria	7.04461	62.7	-	LHUZ01	36	6413	6211	8/18/15	4/4/17	Contig	JLU	SAMN03891664	GCA_001269555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/555/GCA_001269555.1_ASM126955v1	-	DSM 21509
Thermoplasma volcanium GSS1	273116	PRJNA206	206	Euryarchaeota	Thermoplasmata	1.5848	39.9	chromosome:NC_002689.2/BA000011.4	-	1	1629	1545	3/22/01	4/17/17	Complete Genome	"National Institute of Advanced Industrial Science and Technology, Japan"	SAMD00061089	GCA_000011185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/185/GCA_000011185.1_ASM1118v1	11121031	GSS1
Alcaligenes faecalis subsp. phenolicus	232846	PRJNA307081	307081	Proteobacteria	Betaproteobacteria	3.77406	57.6	-	LQAS01	23	3488	3310	1/15/16	4/4/17	Scaffold	CSIR - Indian Institute of Toxicology Research	SAMN04371300	GCA_001516865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/865/GCA_001516865.1_ASM151686v1	26941148	IITR89
Staphylococcus equorum	246432	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.90996	32.8	-	LNQA01	87	2841	2694	9/28/16	4/5/17	Scaffold	Tufts University	SAMN04244251	GCA_001747825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/825/GCA_001747825.1_ASM174782v1	-	962_6
Bacillus pseudofirmus OF4	398511	PRJNA28811	28811	Terrabacteria group	Firmicutes	4.24925	39.8927	chromosome:NC_013791.2/CP001878.2; plasmid pBpOF4-01:NC_013792.1/CP001879.1; plasmid pBpOF4-02:NC_013793.1/CP001880.1	-	3	4263	4104	2/5/10	6/15/17	Complete Genome	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02603086	GCA_000005825.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/005/825/GCA_000005825.2_ASM582v2	21951522	OF4
Paeniclostridium sordellii	1505	PRJEB8135	277660	Terrabacteria group	Firmicutes	3.44803	27.4	-	CEKX01	30	3334	3242	3/13/15	4/4/17	Contig	WTSI	SAMEA1572078	GCA_001372595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/595/GCA_001372595.1_W2975	-	W2975
Bordetella holmesii CDC-H629-BH	1331207	PRJNA202119	202119	Proteobacteria	Betaproteobacteria	3.47298	62.8	-	JGVZ01	198	3345	3107	5/1/14	4/2/17	Contig	JCVI	SAMN02673703	GCA_000662175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/175/GCA_000662175.1_gbb11v01	24948754	CDC-H629-BH
Acinetobacter sp. CIP 102082	1144663	PRJNA183308	183308	Proteobacteria	Gammaproteobacteria	3.01029	41.8	-	APPD01	16	2950	2652	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01828168	GCA_000368365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/365/GCA_000368365.1_Acin_sp_CIP_102082_V1	-	CIP 102082
Bacillus safensis VK	1355022	PRJNA210810	210810	Terrabacteria group	Firmicutes	3.68309	41.6	-	AUPF01	39	-	-	8/6/13	1/8/14	Contig	Saurashtra University	SAMN02470880	GCA_000444215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/215/GCA_000444215.1_BacSafVK	24009116	VK
Klebsiella sp. AS10	936564	PRJNA165913	165913	Proteobacteria	Gammaproteobacteria	6.1738	55.8	-	JAND01	100	6017	5749	1/28/14	2/20/17	Contig	JCVI	SAMN02641568	GCA_000524315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/315/GCA_000524315.1_KspAS10v1.0	-	AS10
Flavobacterium sp. KMS	1566023	PRJNA265082	265082	FCB group	Bacteroidetes/Chlorobi group	5.59713	32.5	-	JSYP01	58	4824	4660	12/31/14	4/10/17	Contig	GCAT-SEEK	SAMN03145368	GCA_000813005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/005/GCA_000813005.1_ASM81300v1	-	KMS
Frankia sp. NRRL B-16219	1834517	PRJNA318440	318440	Terrabacteria group	Actinobacteria	8.03274	71.7	-	MAXA01	289	7054	6211	10/26/16	4/13/17	Contig	"University of Tunis El Manar, Faculty of Sciences of Tunis"	SAMN04851309	GCA_001854695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/695/GCA_001854695.1_ASM185469v1	-	NRRL B-16219
Gallibacterium anatis UMN179	1005058	PRJNA65483	65483	Proteobacteria	Gammaproteobacteria	2.69414	39.8896	chromosome:NC_015460.1/CP002667.1; plasmid pUMN179:NC_015461.1/CP002668.1	-	2	2555	2403	4/26/11	4/6/17	Complete Genome	University of Minnesota	SAMN02604222	GCA_000209675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/209/675/GCA_000209675.1_ASM20967v1	21602325	UMN179
Clostridium sp. ND2	1347366	PRJEB4195	209456	Terrabacteria group	Firmicutes	3.73297	27.6	-	CYSO01	11	3417	3242	9/11/15	4/17/17	Scaffold	URMITE	SAMEA3538361	GCA_001403635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/403/635/GCA_001403635.1_Clostridium_massilioamazoniensis	-	ND2
Sphingomonas sp. Leaf25	1735692	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.00032	67.6	-	LMKU01	33	3628	3470	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151589	GCA_001421635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/635/GCA_001421635.1_ASM142163v1	26633631	Leaf25
Acinetobacter sp. TGL-Y2	1407071	PRJNA293381	293381	Proteobacteria	Gammaproteobacteria	3.69129	39.8756	chromosome:NZ_CP015110.1/CP015110.1; plasmid unnamed1:NZ_CP015111.1/CP015111.1; plasmid unnamed2:NZ_CP015112.1/CP015112.1	-	3	3623	3354	4/7/16	4/6/17	Complete Genome	Cold and Arid Regions Environmental and Engineering Research Institute	SAMN04002505	GCA_001612555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/555/GCA_001612555.1_ASM161255v1	-	TGL-Y2
Rhodococcus sp. Leaf225	1736300	PRJNA297956	297956	Terrabacteria group	Actinobacteria	4.71333	68.3	-	LMRN01	26	4402	4274	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151688	GCA_001426145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/145/GCA_001426145.1_Leaf225	26633631	Leaf225
Enterobacter sp. BIDMC 29	1329841	PRJNA202040	202040	Proteobacteria	Gammaproteobacteria	4.98002	55.9	-	JCLB01	2	4766	4527	2/3/14	4/9/17	Scaffold	Broad Institute	SAMN02138659	GCA_000534375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/375/GCA_000534375.1_Ente_cloa_complex_BIDMC_29_V1	-	BIDMC 29
Staphylococcus sp. HMSC077C04	1715197	PRJNA296325	296325	Terrabacteria group	Firmicutes	2.52948	33.7	-	LTKX01	40	2406	2330	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477553	GCA_001808805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/805/GCA_001808805.1_ASM180880v1	-	HMSC077C04
Corynebacterium sp. KPL1818	1203559	PRJNA169439	169439	Terrabacteria group	Actinobacteria	2.58854	59.4	-	AXMA01	6	2462	2299	10/21/13	4/17/17	Scaffold	Broad Institute	SAMN02597007	GCA_000478135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/135/GCA_000478135.1_Cory_sp_KPL1818_V1	-	KPL1818
Arthrobacter sp. 162MFSha1.1	1151119	PRJNA175166	175166	Terrabacteria group	Actinobacteria	4.39917	66.1	-	ARGS01	53	4120	3975	4/19/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441368	GCA_000374905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/905/GCA_000374905.1_ASM37490v1	-	162MFSha1.1
Escherichia sp. TW11588	754333	PRJNA59765	59765	Proteobacteria	Gammaproteobacteria	4.46358	50.6	-	AEMF01	1	4483	3842	4/21/11	8/8/17	Contig	"Georgia Institute of Technology, School of Civil and Environmental Engineering"	SAMN02469833	GCA_000208585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/208/585/GCA_000208585.2_ASM20858v2	21482770	TW11588
Shewanella sp. UCD-KL21	1917164	PRJNA353007	353007	Proteobacteria	Gammaproteobacteria	4.59877	42	-	MPHK01	84	3956	3727	1/19/17	4/17/17	Contig	UC Davis	SAMN06007764	GCA_001957135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/957/135/GCA_001957135.1_ASM195713v1	-	UCD-KL21
Bradyrhizobium sp. USDA 3384	546899	PRJNA165353	165353	Proteobacteria	Alphaproteobacteria	9.80027	63.6	-	AXAD01	51	9242	8791	9/30/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441457	GCA_000472685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/685/GCA_000472685.1_ASM47268v1	-	USDA 3384
Streptococcus sp. HPH0090	1203590	PRJNA169485	169485	Terrabacteria group	Firmicutes	1.76511	39.6	-	ATCD01	4	1754	1640	6/14/13	4/17/17	Scaffold	Broad Institute	SAMN02596978	GCA_000411475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/475/GCA_000411475.1_Stre_sp_HPH0090_V1	-	HPH0090
Mycobacterium sp. 360MFTsu5.1	1172186	PRJNA187944	187944	Terrabacteria group	Actinobacteria	6.05708	67.2	-	ARTK01	23	5801	5654	4/26/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440518	GCA_000383495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/495/GCA_000383495.1_ASM38349v1	-	360MFTsu5.1
Serratia sp. Ag2	1532556	PRJNA257539	257539	Proteobacteria	Gammaproteobacteria	5.32482	52.3	-	JQEJ01	109	4953	4719	8/25/14	4/9/17	Contig	New Mexico State University	SAMN02990149	GCA_000743365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/365/GCA_000743365.1_ASM74336v1	-	Ag2
Polaromonas sp. 39-63-203	1970419	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	2.99005	62.6	-	NCJN01	568	3100	2807	8/16/17	8/16/17	Scaffold	None	SAMN06622215	GCA_002278975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/975/GCA_002278975.1_ASM227897v1	-	-
Pantoea sp. SM3	1628192	PRJNA277270	277270	Proteobacteria	Gammaproteobacteria	5.33219	53.8	-	JZRD01	89	4993	4830	3/27/15	4/10/17	Contig	University of Malaya	SAMN03389082	GCA_000963995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/995/GCA_000963995.1_ASM96399v1	-	SM3
Prevotella sp. KHD1	1776379	PRJEB13540	318673	FCB group	Bacteroidetes/Chlorobi group	3.76511	48.7	-	FKKG01	27	3155	2955	4/20/16	4/17/17	Scaffold	URMITE	SAMEA3932115	GCA_900079775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/775/GCA_900079775.1_PRJEB13540	-	KHD1
Enterococcus sp. HMSC073E08	1739320	PRJNA299970	299970	Terrabacteria group	Firmicutes	2.85575	37.8	-	LTFN01	266	2928	2765	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477630	GCA_001811715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/715/GCA_001811715.1_ASM181171v1	-	HMSC073E08
Lactobacillus sp. HMSC073B09	1739438	PRJNA300088	300088	Terrabacteria group	Firmicutes	2.87076	46.6	-	LTVY01	97	2878	2669	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480361	GCA_001813825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/825/GCA_001813825.1_ASM181382v1	-	HMSC073B09
Novosphingobium sp. NDB2Meth1	1892847	PRJEB17665	353791	Proteobacteria	Alphaproteobacteria	4.5558	65.4	-	FPEH01	35	4285	4179	11/16/16	4/16/17	Contig	Griffith University	SAMEA4535142	GCA_900117425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/425/GCA_900117425.1_NDB2Meth1_assembly_1	-	-
Treponema sp. UBA792	1947759	PRJNA348753	348753	Spirochaetes	Spirochaetia	1.89535	50.7	-	DBIW01	46	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455915	GCA_002296965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/965/GCA_002296965.1_ASM229696v1	28894102	-
Citrobacter sp. BIDMC107	1686384	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.32474	51.8	-	LEST01	6	5273	4968	6/19/15	4/10/17	Scaffold	Broad Institute	SAMN03280169	GCA_001037575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/575/GCA_001037575.1_Citr_freu_complex_BIDMC107_V1	-	BIDMC107
Methylobacterium sp. Leaf87	1736243	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.98239	68.7	-	LMMI01	61	4599	4390	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151623	GCA_001422775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/775/GCA_001422775.1_Leaf87	26633631	Leaf87
Paracoccus sp. UBA3880	1947052	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.65405	68.3	-	DGGG01	285	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453886	GCA_002392085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/085/GCA_002392085.1_ASM239208v1	28894102	-
Nocardioides sp. Root240	1736500	PRJNA297942	297942	Terrabacteria group	Actinobacteria	5.13459	71.5	-	LMIT01	16	4840	4709	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155769	GCA_001428825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/825/GCA_001428825.1_Root240	26633631	Root240
Erythrobacter sp. EhN03	1849358	PRJNA321723	321723	Proteobacteria	Alphaproteobacteria	3.00701	63.7	-	LXYL01	15	2932	2832	5/24/16	4/12/17	Contig	University of Alberta	SAMN04957306	GCA_001650805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/805/GCA_001650805.1_ASM165080v1	-	EhN03
Sulfitobacter sp. UBA3610	1947583	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.41038	58.9	-	DFLV01	236	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454027	GCA_002375485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/485/GCA_002375485.1_ASM237548v1	28894102	-
Marinobacter sp. AC-23	1879031	PRJNA329576	329576	Proteobacteria	Gammaproteobacteria	4.14971	53.9	-	MBPP01	105	3950	3052	11/1/16	4/13/17	Contig	Agharkar Research Institute	SAMN05415084	GCA_001858325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/325/GCA_001858325.1_ASM185832v1	-	AC-23
Acidovorax sp. Root275	1736508	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	5.56182	64.8	-	LMJH01	12	5023	4925	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155777	GCA_001428965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/965/GCA_001428965.1_Root275	26633631	Root275
Psychrobacter sp. FDAARGOS_221	1975705	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	3.16095	42.6	-	NWFK01	1	2662	2528	9/19/17	9/21/17	Contig	US Food and Drug Administration 	SAMN04875558	GCA_002313155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/155/GCA_002313155.1_ASM231315v1	-	FDAARGOS_221
Caulobacter sp. JGI 0001013-D04	1157680	PRJNA169803	169803	Proteobacteria	Alphaproteobacteria	0.895702	67.3	-	AQWW01	207	-	-	4/20/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440411	GCA_000376305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/305/GCA_000376305.1_ASM37630v1	-	JGI 0001013-D04
Janthinobacterium sp. HH106	1537278	PRJNA309040	309040	Proteobacteria	Betaproteobacteria	6.30996	62.9	-	LRIC01	73	5651	5495	10/11/16	4/13/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04320690	GCA_001758725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/725/GCA_001758725.1_ASM175872v1	27833590	HH106
Eubacterium sp. CAG:180	1262882	PRJEB743	206592	Terrabacteria group	Firmicutes	1.88217	44.5	-	CAZC01	26	1787	1742	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138509	GCA_000432435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/435/GCA_000432435.1_MGS180	-	-
Brevundimonas sp. 67-6	1895725	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	2.93019	66.2	-	MKRY01	418	3167	2229	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660515	GCA_001897025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/025/GCA_001897025.1_ASM189702v1	-	-
Stenotrophomonas sp. 92mfcol6.1	1761901	PRJEB17286	351462	Proteobacteria	Gammaproteobacteria	4.59623	66.3	-	FWEU01	11	4202	4089	3/21/17	3/24/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488690	GCA_900116025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/025/GCA_900116025.1_IMG-taxon_2639762581_annotated_assembly	-	92MFCol6.1
Paenibacillus sp. HGH0039	1078505	PRJNA72483	72483	Terrabacteria group	Firmicutes	6.36299	52.9	-	AGEN01	5	5737	5572	6/14/13	4/10/17	Scaffold	Broad Institute	SAMN02596731	GCA_000411255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/255/GCA_000411255.1_Paen_sp_HGH0039_V1	-	HGH0039
Ruminococcus sp. CAG:108	1262950	PRJEB686	206655	Terrabacteria group	Firmicutes	2.09038	40.6	-	CAXD01	65	1952	1917	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138562	GCA_000433495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/495/GCA_000433495.1_MGS108	-	-
Thioalkalivibrio sp. ALE27	1158178	PRJNA176951	176951	Proteobacteria	Gammaproteobacteria	2.74568	67.4	-	ARIK01	22	2706	2580	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440457	GCA_000377485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/485/GCA_000377485.1_ASM37748v1	-	ALE27
Bacteroides sp. 3_1_40A	469593	PRJNA38773	38773	FCB group	Bacteroidetes/Chlorobi group	5.50578	42.6	-	ACRT01	73	4824	4404	1/11/11	5/18/17	Scaffold	Broad Institute	SAMN02463762	GCA_000186105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/105/GCA_000186105.1_Bacteroides_sp_3_1_40A_V1	-	3_1_40A
Exiguobacterium sp. KRL4	1914536	PRJNA350615	350615	Terrabacteria group	Firmicutes	3.11808	46.9	-	MOLV01	48	3173	3076	11/7/16	4/13/17	Contig	Institute of Protein Biochemistry	SAMN05943017	GCA_001870785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/785/GCA_001870785.1_ASM187078v1	-	KRL4
Shigella sp. FC1764	1886514	PRJNA338023	338023	Proteobacteria	Gammaproteobacteria	4.61017	50.8	-	MDDH01	588	4945	4114	8/24/16	8/24/16	Contig	Christian Medical College	SAMN05520375	GCA_001712585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/585/GCA_001712585.1_ASM171258v1	-	FC1764
Prochlorococcus sp. HOT208_60m_813L03	1961092	PRJNA375759	375759	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.18054	31.3	-	MWOQ01	330	1314	1150	3/14/17	3/16/17	Contig	Massachusetts Institute of Technology	SAMN06345452	GCA_002026145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/145/GCA_002026145.1_ASM202614v1	-	HOT208_60m_813L03
Desulfovibrio sp. MES5	1899016	PRJNA245339	245339	Proteobacteria	delta/epsilon subdivisions	3.47125	57.8	-	MJUZ01	52	2841	2713	7/31/17	7/31/17	Contig	Argonne National Laboratory	SAMN05420164	GCA_002237645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/645/GCA_002237645.1_DESULFO_MES5	-	-
Actinomyces sp. HMSC08A01	1581131	PRJNA269900	269900	Terrabacteria group	Actinobacteria	2.16892	56.6	-	LWNY01	17	1990	1909	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03434237	GCA_001807435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/435/GCA_001807435.1_ASM180743v1	-	HMSC08A01
Parabacteroides sp. UBA1708	1947048	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.47336	45.6	-	DCJE01	342	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06451235	GCA_002317375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/375/GCA_002317375.1_ASM231737v1	28894102	-
Ralstonia sp. PBBBR1	2015562	PRJNA340070	340070	Proteobacteria	Betaproteobacteria	5.03423	63.8	-	NKIL01	22	4786	4596	8/16/17	8/16/17	Scaffold	CNRS-AMU	SAMN07280682	GCA_002256165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/165/GCA_002256165.1_ASM225616v1	-	-
Propionibacterium sp. HMSC067A01	1739486	PRJNA300136	300136	Terrabacteria group	Actinobacteria	2.48418	60	-	LTUJ01	9	2479	2267	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480452	GCA_001814725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/725/GCA_001814725.1_ASM181472v1	-	HMSC067A01
Alistipes sp. CAG:29	1262694	PRJEB814	206809	FCB group	Bacteroidetes/Chlorobi group	3.12745	58.7	-	CBGS01	122	2620	2584	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138658	GCA_000435435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/435/GCA_000435435.1_MGS29	-	-
Campylobacter sp. 108	2039340	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.70147	30.4	-	NXBB01	80	1830	1681	9/27/17	9/27/17	Contig	University of California at Davis	SAMN05711873	GCA_002383825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/825/GCA_002383825.1_ASM238382v1	-	108
Neisseria sp. HMSC055F11	1715117	PRJNA296245	296245	Proteobacteria	Betaproteobacteria	2.46465	51	-	LTJK01	147	2413	2173	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477518	GCA_001809595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/595/GCA_001809595.1_ASM180959v1	-	HMSC055F11
Pseudonocardia sp. Ae331_Ps2	1885031	PRJNA336255	336255	Terrabacteria group	Actinobacteria	6.43313	73.7	-	MCIM01	23	5993	5691	1/4/17	4/17/17	Scaffold	University of East Anglia	SAMN05506993	GCA_001932405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/405/GCA_001932405.1_ASM193240v1	-	Ae331_Ps2
Collinsella sp. UBA4370	1946388	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.0968	59.8	-	DGSE01	30	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451340	GCA_002391315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/315/GCA_002391315.1_ASM239131v1	28894102	-
Thalassospira sp. UBA4513	1947675	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	4.32282	54.7	-	DGMR01	42	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450760	GCA_002388495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/495/GCA_002388495.1_ASM238849v1	28894102	-
Megasphaera sp. UBA4264	1946848	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.12804	49.3	-	DGWG01	25	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456221	GCA_002395205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/205/GCA_002395205.1_ASM239520v1	28894102	-
Sphingobacterium sp. UBA1644	1947485	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	5.34909	39.9	-	DCLQ01	105	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454767	GCA_002321155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/155/GCA_002321155.1_ASM232115v1	28894102	-
Thiomonas sp. CB2	554131	PRJEB3960	213524	Proteobacteria	Betaproteobacteria	3.73944	63.7	-	-	92	3849	3783	-	-	Scaffold	GMGM-UMR7156-CNRS/UDS	SAMEA2518985	GCA_000947035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/035/GCA_000947035.1_ThiCB2	-	-
Rhodanobacter sp. C05	1945855	PRJNA369723	369723	Proteobacteria	Gammaproteobacteria	4.24862	62.3	-	MUNQ01	30	3796	3684	2/16/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN06293017	GCA_002001165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/165/GCA_002001165.1_ASM200116v1	-	C05
Rothia sp. HMSC069C04	1739383	PRJNA300033	300033	Terrabacteria group	Actinobacteria	2.31446	59.6	-	LTXR01	65	1824	1727	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480055	GCA_001812895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/895/GCA_001812895.1_ASM181289v1	-	HMSC069C04
Sphingobium sp. 22B	936474	PRJNA313003	313003	Proteobacteria	Alphaproteobacteria	5.36785	64.4	-	LTAB01	107	5054	4847	3/3/16	4/17/17	Contig	"CINDEFI, UNLP/CONICET"	SAMN04511039	GCA_001580035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/035/GCA_001580035.1_ASM158003v1	27257204	22B
Halomonas sp. KM-1	590061	PRJDB36	82165	Proteobacteria	Gammaproteobacteria	4.99281	64.1	-	BAEU01	173	4625	4377	1/27/12	5/18/17	Contig	National Institute of Advanced Industrial Science and Technology (AIST)	SAMD00036607	GCA_000246875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/875/GCA_000246875.2_ASM24687v2	"2,217,291,322,535,920"	KM-1
Idiomarina sp. UBA4206	1946644	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.76972	45.9	-	DFTS01	78	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455419	GCA_002383015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/015/GCA_002383015.1_ASM238301v1	28894102	-
Cyanothece sp. PCC 7822	497965	PRJNA28535	28535	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.84195	39.874	chromosome:NC_014501.1/CP002198.1; plasmid Cy782201:NC_014533.1/CP002199.1; plasmid Cy782202:NC_014534.1/CP002200.1; plasmid Cy782203:NC_014502.1/CP002201.1; plasmid Cy782204:NC_014503.1/CP002202.1; plasmid Cy782205:NC_014504.1/CP002203.1; plasmid Cy782206:NC_014535.1/CP002204.1	-	7	6965	6683	9/15/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000663	GCA_000147335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/335/GCA_000147335.1_ASM14733v1	-	PCC 7822
Chryseobacterium sp. Leaf394	1736361	PRJNA297956	297956	FCB group	Bacteroidetes/Chlorobi group	4.31845	36.5	-	LMQH01	17	3973	3840	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151751	GCA_001424105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/105/GCA_001424105.1_Leaf394	26633631	Leaf394
Cellulomonas sp. 73-145	1895739	PRJNA279279	279279	Terrabacteria group	Actinobacteria	3.87343	73.1	-	MKTI01	14	3620	3500	12/9/16	12/9/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN05660551	GCA_001898185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/185/GCA_001898185.1_ASM189818v1	-	-
Mesorhizobium sp. L103C105A0	1287074	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.52326	62.6	-	AYXF01	48	6469	5990	12/3/13	4/9/17	Contig	University of Southern California	SAMN02359649	GCA_000502215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/215/GCA_000502215.1_Mloti_L103C105A0	-	L103C105A0
Variovorax sp. PDC80	1882827	PRJEB17179	351349	Proteobacteria	Betaproteobacteria	8.96238	69.6	-	FOWG01	42	8106	7938	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443579	GCA_900115375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/375/GCA_900115375.1_IMG-taxon_2687453681_annotated_assembly	-	PDC80
Xanthomonas translucens pv. graminis	134874	PRJEB10860	357898	Proteobacteria	Gammaproteobacteria	4.14792	68.8	-	FLTY01	313	3535	3252	12/16/16	4/6/17	Contig	CEBITEC	SAMEA4071039	GCA_900092485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/485/GCA_900092485.1_Xtg10	-	-
Snodgrassella alvi	1196083	PRJNA339423	339423	Proteobacteria	Betaproteobacteria	2.42149	41.2	-	NAHO01	38	2168	2065	4/13/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603570	GCA_002088665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/665/GCA_002088665.1_ASM208866v1	-	N-S4
Microbacterium sp. Leaf159	1736279	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.88721	68.1	-	LMOU01	5	3733	3615	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151659	GCA_001423615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/615/GCA_001423615.1_Leaf159	26633631	Leaf159
Cupriavidus sp. NDB4MOL1	2003588	PRJEB20989	395446	Proteobacteria	Betaproteobacteria	6.90111	63.6	-	FYAX01	48	-	-	7/22/17	7/22/17	Contig	Griffith University	SAMEA104113274	GCA_900185755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/755/GCA_900185755.1_NDB4MOL1_Assembly_1	-	-
Mycobacterium fortuitum	1766	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.74356	66.1	-	LZLP01	159	6550	6280	6/17/16	4/5/17	Contig	JCVI	SAMN04634170	GCA_001673325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/325/GCA_001673325.1_ASM167332v1	-	1165541.1
Aeromonas sp. 62-46	1895698	PRJNA279279	279279	Proteobacteria	Gammaproteobacteria	4.46758	61.8	-	MKUI01	60	4039	3948	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660577	GCA_001898585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/585/GCA_001898585.1_ASM189858v1	-	-
Elizabethkingia meningoseptica	238	PRJEB18490	356705	FCB group	Bacteroidetes/Chlorobi group	3.93502	36.3	-	FRFB01	29	3518	3448	12/9/16	4/6/17	Contig	JUSTUS LIEBIG UNIVERSITY	SAMEA20464918	GCA_900143665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/665/GCA_900143665.1_Elizabethkingia_filter500.fasta	-	-
Gordonia sp. CNJ-863	1904963	PRJNA344658	344658	Terrabacteria group	Actinobacteria	5.39872	67.3	-	MKKG01	94	5043	4545	1/11/17	4/17/17	Scaffold	"Scripps Institution of Oceanography, UCSD"	SAMN05830215	GCA_001942325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/325/GCA_001942325.1_ASM194232v1	27902408	CNJ-863
uncultured Blautia sp.	765821	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.93887	43.6	-	FMEQ01	77	3617	3562	8/16/16	8/16/16	Scaffold	SC	SAMEA2393092	GCA_900066085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/085/GCA_900066085.1_12718_7_95	-	-
Massilia sp. JGI 0001003-B08	1235984	PRJNA176051	176051	Proteobacteria	Betaproteobacteria	0.302198	60.1	-	AUNT02	27	-	-	7/16/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440693	GCA_000463835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/835/GCA_000463835.2_ASM46383v2	-	JGI 0001003-B08
Blastomonas sp. CCH1-A6	1768762	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	4.71657	64.4	-	LSIS01	558	4694	4286	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299443	GCA_001556365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/365/GCA_001556365.1_ASM155636v1	-	CCH1-A6
Raoultella ornithinolytica	54291	PRJEB18670	358182	Proteobacteria	Gammaproteobacteria	5.64471	55.6	-	FTLF01	38	5507	5201	1/4/17	4/6/17	Contig	URMITE	SAMEA37049668	GCA_900155375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/375/GCA_900155375.1_PRJEB18670	-	Marseille-P1025
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.78569	58.8	-	LNWO01	65	4594	4453	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339852	GCA_001681515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/515/GCA_001681515.1_ASM168151v1	-	F3801
Curtobacterium sp. MCBA15_012	1898738	PRJNA342146	342146	Terrabacteria group	Actinobacteria	3.61644	71.9	-	MJGP01	82	3288	3148	11/2/16	4/13/17	Scaffold	Massachusetts Institute of Technology	SAMN05736489	GCA_001864935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/935/GCA_001864935.1_ASM186493v1	-	MCBA15_012
Streptomyces rimosus subsp. rimosus	132474	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.37521	72	-	JOCR01	214	8269	7833	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645424	GCA_000720715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/715/GCA_000720715.1_ASM72071v1	-	NRRL WC-3900
Butyrivibrio sp. AE2005	1496722	PRJNA243945	243945	Terrabacteria group	Firmicutes	3.71208	40.6	-	JMMD01	41	3437	3298	5/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743362	GCA_000686965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/965/GCA_000686965.1_ASM68696v1	-	AE2005
Ensifer sp. LC11	1873712	PRJNA328912	328912	Proteobacteria	Alphaproteobacteria	6.21721	62.2	-	MBSO01	73	5856	5662	7/28/16	4/13/17	Contig	Monash University Malaysia	SAMN05383995	GCA_001695835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/835/GCA_001695835.1_LC11_v1	-	LC11
Leifsonia sp. ALI-44-B	1933776	PRJNA360621	360621	Terrabacteria group	Actinobacteria	3.32795	67.7	-	MTQL01	7	3064	2965	2/3/17	4/17/17	Contig	Los Alamos National Laboratory	SAMN06213902	GCA_001984125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/125/GCA_001984125.1_ASM198412v1	28087533	ALI-44-B
Sphingopyxis sp. H093	1759071	PRJNA294421	294421	Proteobacteria	Alphaproteobacteria	5.34699	64.5	-	LNRY01	76	5088	4897	12/15/15	4/11/17	Contig	US EPA	SAMN04252884	GCA_001467475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/475/GCA_001467475.1_ASM146747v1	-	H093
Helicobacter sp. MIT 05-5294	1548150	PRJNA261711	261711	Proteobacteria	delta/epsilon subdivisions	3.21975	37.9	-	JRPA01	3237	4939	4716	10/10/14	10/10/14	Contig	Massachusetts Institute of Technology	SAMN03075559	GCA_000765675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/675/GCA_000765675.1_ASM76567v1	-	MIT 05-5294
Faecalibacterium sp. UBA2087	1946508	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.0604	56	-	DCZJ01	254	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457478	GCA_002331585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/585/GCA_002331585.1_ASM233158v1	28894102	-
Roseburia sp. CAG:18_43_25	1897017	PRJNA321218	321218	Terrabacteria group	Firmicutes	2.57908	43.8	-	MNTM01	77	2439	2305	12/23/16	12/23/16	Scaffold	None	SAMN05717296	GCA_001916975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/975/GCA_001916975.1_ASM191697v1	27819664	-
Pseudobutyrivibrio sp. UBA4308	1947302	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.2549	36.2	-	DGUO01	54	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453870	GCA_002395765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/765/GCA_002395765.1_ASM239576v1	28894102	-
Salinivibrio sp. ML331	1909480	PRJNA368702	368702	Proteobacteria	Gammaproteobacteria	3.54512	50.5	-	MUEV01	112	3248	3137	2/14/17	2/22/17	Contig	Universidad de Sevilla	SAMN06270240	GCA_001995995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/995/GCA_001995995.1_ASM199599v1	-	ML331
Arenibacter algicola	616991	PRJNA380207	380207	FCB group	Bacteroidetes/Chlorobi group	5.85778	39.8442	chromosome:NZ_CP022515.1/CP022515.1; plasmid pSMS7:NZ_CP022516.1/CP022516.1	-	2	4954	4831	7/27/17	8/1/17	Complete Genome	University of Gothenburg	SAMN07322679	GCA_002234495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/234/495/GCA_002234495.1_ASM223449v1	-	SMS7
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.43439	35.6	-	LZGS01	53	2223	2084	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179597	GCA_001690495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/495/GCA_001690495.1_ASM169049v1	-	App4-10
Lysinibacillus sp. TC-13	1500273	PRJEB16968	351072	Terrabacteria group	Firmicutes	4.77209	37.3	-	FOEL01	44	4735	4526	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02787113	GCA_900110625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/625/GCA_900110625.1_IMG-taxon_2585428097_annotated_assembly	-	TC-13
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.08875	42.1	-	FTQM01	2	968	905	3/18/17	3/24/17	Contig	Functional Genomics Genter Zurich	SAMEA4555923	GCA_900149525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/525/GCA_900149525.1_1-25b	-	-
Lactobacillus kunkeei	148814	PRJNA270970	270970	Terrabacteria group	Firmicutes	1.57686	37.4	-	JXDD01	16	1488	1400	10/8/15	4/4/17	Contig	Uppsala university	SAMN03277034	GCA_001308215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/308/215/GCA_001308215.1_ASM130821v1	25953738	LAnu
Devosia sp. 66-22	1895753	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	4.35507	65.9	-	MKUZ01	31	4351	4223	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660594	GCA_001899065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/065/GCA_001899065.1_ASM189906v1	-	-
Bosea sp. 67-29	1895723	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	4.8632	67.2	-	MKSQ01	29	4627	4512	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660533	GCA_001898115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/115/GCA_001898115.1_ASM189811v1	-	-
Vibrio metoecus	1481663	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.89005	46.9	-	NMSO01	82	3718	3542	8/31/17	9/2/17	Scaffold	University of Alberta	SAMN07350494	GCA_002284025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/025/GCA_002284025.1_ASM228402v1	-	OYP8G12
Klebsiella michiganensis	1134687	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	6.4776	55.7	-	JTBQ01	5	6419	5941	11/14/14	7/11/17	Contig	US Food and Drug Administration 	SAMN02934515	GCA_000783895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/895/GCA_000783895.1_ASM78389v1	-	FDAARGOS_66
Achromobacter sp. DMS1	1688405	PRJNA290420	290420	Proteobacteria	Betaproteobacteria	4.94124	67.3	-	LHSJ01	356	4956	3570	8/18/15	4/11/17	Scaffold	Sardar Patel University	SAMN03891578	GCA_001270295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/295/GCA_001270295.1_ASM127029v1	26494688	DMS1
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	7.48739	44.1	-	MPTN01	173	6753	6549	1/18/17	4/6/17	Contig	Cornell University	SAMN05772527	GCA_001954595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/595/GCA_001954595.1_ASM195459v1	-	FSL F4-0242
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.3669	51.2	-	MPQX01	67	2336	2235	3/6/17	3/9/17	Contig	Harvard University	SAMN06016270	GCA_002020965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/965/GCA_002020965.1_ASM202096v1	-	-
Mycobacterium immunogenum	83262	PRJNA308413	308413	Terrabacteria group	Actinobacteria	5.27215	64.4	-	LQYE01	32	5172	5029	6/2/16	4/5/17	Scaffold	Institute of Microbial Technology	SAMN04395166	GCA_001655155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/155/GCA_001655155.1_ASM165515v1	-	CD11-6
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79488	32.3	-	FQMN01	14	2800	2623	11/24/16	4/6/17	Contig	SC	SAMEA3449072	GCA_900126555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/555/GCA_900126555.1_17175_3_16	-	3688STDY6125064
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJNA323406	323406	Proteobacteria	Gammaproteobacteria	5.44015	57.5	-	LYSU01	39	5418	5155	6/16/16	2/21/17	Contig	Fatima Jinnah Women University	SAMN05178559	GCA_001663535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/535/GCA_001663535.1_ASM166353v1	-	MB373
Lactobacillus parabuchneri	152331	PRJNA357007	357007	Terrabacteria group	Firmicutes	2.57063	43.5	-	MSAS01	38	2463	2337	4/18/17	4/21/17	Scaffold	University of Bern	SAMN06130973	GCA_002095795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/795/GCA_002095795.1_ASM209579v1	28261177	FAM21809
Lactobacillus taiwanensis	508451	PRJNA384810	384810	Terrabacteria group	Firmicutes	1.97425	34.2	-	NGOQ01	49	1948	1751	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848414	GCA_002253445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/445/GCA_002253445.1_ASM225344v1	-	111m
Enterobacter kobei	208224	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.23293	54.4	-	LPPL01	145	5276	4942	12/21/15	4/4/17	Contig	JCVI	SAMN04252923	GCA_001472595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/595/GCA_001472595.1_SMART_635.v1	-	SMART_635
Enterobacter xiangfangensis	1296536	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.00113	55.1	-	NEZA01	43	4969	4740	6/9/17	6/12/17	Contig	JCVI	SAMN06812633	GCA_002185845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/845/GCA_002185845.1_ASM218584v1	-	ARLG-2967
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.13226	66.6	-	LPDT01	102	6568	6260	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449439	GCA_001528995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/995/GCA_001528995.1_ASM152899v1	-	MSMB1168WGS
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.91819	67.5	-	LPAQ01	109	7117	6749	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449353	GCA_001528085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/085/GCA_001528085.1_ASM152808v1	-	MSMB1606WGS
Syntrophomonas sp. UBA3954	1947617	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.20144	50.4	-	DGDK01	189	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452261	GCA_002385395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/395/GCA_002385395.1_ASM238539v1	28894102	-
Proteiniphilum sp. 51_7	1641377	PRJNA278302	278302	FCB group	Bacteroidetes/Chlorobi group	1.12313	50.9	-	LGHH01	292	1197	1197	1/8/16	1/8/16	Scaffold	Lawrence Berkeley National Lab	SAMN03445188	GCA_001509175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/175/GCA_001509175.1_ASM150917v1	26787827	-
Enterobacter cloacae complex 'Hoffmann cluster IV'	1812935	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.76849	55.6	-	JWGT01	260	4644	4421	7/10/15	4/20/17	Scaffold	University of Washington	SAMN03196963	GCA_001052605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/605/GCA_001052605.1_ASM105260v1	26230489	1001_ECLO
Polynucleobacter sp. 39-46-10	1970428	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	3.2521	46	-	NCJB01	575	3532	3391	8/16/17	8/16/17	Scaffold	None	SAMN06622227	GCA_002282275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/275/GCA_002282275.1_ASM228227v1	-	-
Oleiphilus sp. HI0081	1822256	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	4.40273	44.3	-	LWFV01	2463	4198	3186	5/2/16	5/2/16	Contig	Massachusetts Institute of Technology	SAMN04580795	GCA_001635145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/145/GCA_001635145.1_ASM163514v1	-	HI0081
Lachnoclostridium sp. UBA1175	1946682	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.79702	55.7	-	DBYX01	23	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06457422	GCA_002311665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/665/GCA_002311665.1_ASM231166v1	28894102	-
Gilliamella sp. N-G2	1970471	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.70919	34.4	-	NAST01	77	2587	2486	5/16/17	5/24/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603544	GCA_002142215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/215/GCA_002142215.1_ASM214221v1	-	N-G2
Fibrobacter sp. UWH5	1896211	PRJEB18360	355798	FCB group	Fibrobacteres	3.73665	49.1	-	FRBB01	59	3134	2986	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05720764	GCA_900142505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/505/GCA_900142505.1_IMG-taxon_2700988685_annotated_assembly	-	UWH5
Archaeoglobus sp. JdFR-29	1934986	PRJNA269163	269163	Euryarchaeota	Archaeoglobi	0.737977	44.9	-	MTMQ01	185	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226346	GCA_002011255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/255/GCA_002011255.1_ASM201125v1	28350381	-
Xanthomonas axonopodis pv. manihotis str. IBSBF 1182	1185670	PRJNA163735	163735	Proteobacteria	Gammaproteobacteria	4.77369	65	-	AKDB01	648	4547	3824	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090306	GCA_000265865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/865/GCA_000265865.1_IBSBF1182	22699502	IBSBF 1182
Catabacter sp. UBA1214	1946237	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.89288	56.3	-	DBXK01	54	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457298	GCA_002309375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/375/GCA_002309375.1_ASM230937v1	28894102	-
Candidatus Microthrix sp. UBA1665	1946160	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.20062	52	-	DCKV01	187	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451692	GCA_002320475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/475/GCA_002320475.1_ASM232047v1	28894102	-
Candidatus Microthrix sp. UBA1617	1946159	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.14365	45	-	DCMR01	190	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454487	GCA_002321515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/515/GCA_002321515.1_ASM232151v1	28894102	-
Catabacter sp. UBA1076	1946236	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.37351	35	-	DCCR01	73	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06450698	GCA_002313875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/875/GCA_002313875.1_ASM231387v1	28894102	-
Xanthomonas axonopodis pv. manihotis str. IBSBF 1411	1185671	PRJNA163737	163737	Proteobacteria	Gammaproteobacteria	4.85613	65.2	-	AKDC01	130	4307	3990	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090307	GCA_000265885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/885/GCA_000265885.1_IBSBF1411	22699502	IBSBF 1411
Archaeoglobus sp. JdFR-34	1934991	PRJNA269163	269163	Euryarchaeota	Archaeoglobi	1.08806	41.4	-	MTMV01	88	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226351	GCA_002011295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/295/GCA_002011295.1_ASM201129v1	28350381	-
Fibrobacter sp. UWEL	1896209	PRJEB18363	355801	FCB group	Fibrobacteres	3.53004	49.1	-	FRBE01	62	2967	2841	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05720468	GCA_900142535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/535/GCA_900142535.1_IMG-taxon_2700988688_annotated_assembly	-	UWEL
Gilliamella sp. N-G3	1970472	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.48289	34.7	-	NASU01	83	2248	2155	5/16/17	5/24/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603545	GCA_002142225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/225/GCA_002142225.1_ASM214222v1	-	N-G3
Lachnoclostridium sp. UBA1781	1946686	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.21293	46.3	-	DCGJ01	179	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06457765	GCA_002315495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/495/GCA_002315495.1_ASM231549v1	28894102	-
Oleiphilus sp. HI0085	1822259	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	4.48254	44.3	-	LWFY01	3230	4118	3016	5/2/16	5/2/16	Contig	Massachusetts Institute of Technology	SAMN04580798	GCA_001635215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/215/GCA_001635215.1_ASM163521v1	-	HI0085
Polynucleobacter sp. 39-45-136	1970427	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	2.61014	44.9	-	NCJM01	1156	3301	2942	8/16/17	8/16/17	Scaffold	None	SAMN06622216	GCA_002282485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/485/GCA_002282485.1_ASM228248v1	-	-
Enterobacter cloacae complex 'Hoffmann cluster IV'	1812935	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.00671	55.7	-	JWAF01	189	4902	4634	7/10/15	4/20/17	Scaffold	University of Washington	SAMN03197133	GCA_001052895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/895/GCA_001052895.1_ASM105289v1	26230489	1176_ECLO
Proteiniphilum sp. UBA1403	1947252	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.75676	42.5	-	DBQD01	74	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06450953	GCA_002305715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/715/GCA_002305715.1_ASM230571v1	28894102	-
Syntrophomonas sp. UBA4990	1947628	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.17578	47.2	-	DGZC01	118	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455641	GCA_002396925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/925/GCA_002396925.1_ASM239692v1	28894102	-
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.9191	67.5	-	LPFK01	93	7104	6746	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449484	GCA_001529505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/505/GCA_001529505.1_ASM152950v1	-	MSMB1477WGS
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.26739	66.5	-	LPEQ01	146	6745	6401	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449464	GCA_001529965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/965/GCA_001529965.1_ASM152996v1	-	MSMB1301WGS
Enterobacter xiangfangensis	1296536	PRJEB9821	382651	Proteobacteria	Gammaproteobacteria	4.67107	55.3	-	FYBF01	138	4558	4343	6/9/17	6/21/17	Contig	JUSTUS LIEBIG UNIVERSITY	SAMEA104113921	GCA_900185925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/925/GCA_900185925.1_Enterobacter_xiangfangensis_LMG_27195T_ERS954914	-	-
Enterobacter kobei	208224	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.9612	54.9	-	LRCP01	94	4886	4602	1/19/16	4/4/17	Contig	JCVI	SAMN04407786	GCA_001518165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/165/GCA_001518165.1_ASM151816v1	-	GN04300
Lactobacillus taiwanensis	508451	PRJNA384810	384810	Terrabacteria group	Firmicutes	1.98056	34.2	-	NGOR01	63	1948	1747	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848413	GCA_002253455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/455/GCA_002253455.1_ASM225345v1	-	111k
Lactobacillus parabuchneri	152331	PRJNA357007	357007	Terrabacteria group	Firmicutes	2.65485	43.2	-	MSBB01	164	2641	2364	4/18/17	4/21/17	Scaffold	University of Bern	SAMN06130982	GCA_002095815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/815/GCA_002095815.1_ASM209581v1	28261177	FAM23167
Klebsiella quasipneumoniae	1463165	PRJNA307517	307517	Proteobacteria	Gammaproteobacteria	5.86025	57.2	-	LXMI01	173	5873	5453	8/9/16	2/21/17	Contig	The Unniversity of Queensland	SAMN04868741	GCA_001701875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/875/GCA_001701875.1_ASM170187v1	-	21_GR_13
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.83231	32.3	-	FQMM01	15	2859	2687	11/24/16	4/6/17	Contig	SC	SAMEA3449074	GCA_900126565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/565/GCA_900126565.1_17175_3_18	-	3688STDY6125066
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.6011	51	-	MPRH01	64	2561	2462	3/6/17	3/9/17	Contig	Harvard University	SAMN06016281	GCA_002021075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/075/GCA_002021075.1_ASM202107v1	-	-
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	7.256	44	-	MPTO01	106	6525	6350	1/18/17	4/6/17	Contig	Cornell University	SAMN05772526	GCA_001954615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/615/GCA_001954615.1_ASM195461v1	-	FSL H7-0918
Achromobacter sp. 2789STDY5608620	1806502	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	6.95503	67.3	-	CYTM01	35	6436	6206	9/19/15	4/11/17	Scaffold	SC	SAMEA2247585	GCA_001298795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/795/GCA_001298795.1_11861_6_14	-	2789STDY5608620
Klebsiella michiganensis	1134687	PRJNA265011	265011	Proteobacteria	Gammaproteobacteria	5.92612	56	-	JSWW01	84	5711	5488	5/14/15	2/21/17	Contig	University of Malaya	SAMN03145042	GCA_001006545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/545/GCA_001006545.1_ASM100654v1	-	CH2
Vibrio metoecus	1481663	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.93901	46.9	-	NMSP01	86	3741	3561	8/31/17	9/2/17	Scaffold	University of Alberta	SAMN07350493	GCA_002284045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/045/GCA_002284045.1_ASM228404v1	-	OYP8G09
Bosea sp. 12-68-7	1970324	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	4.56938	67.9	-	NCCO01	312	4695	4376	8/16/17	8/16/17	Scaffold	None	SAMN06622396	GCA_002279705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/705/GCA_002279705.1_ASM227970v1	-	-
Devosia sp. 67-54	1895754	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	4.21343	67.1	-	MKVA01	12	4134	4052	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660595	GCA_001899075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/075/GCA_001899075.1_ASM189907v1	-	-
Lactobacillus kunkeei	148814	PRJDB4780	357401	Terrabacteria group	Firmicutes	1.58041	36.8	-	BDDX01	25	1512	1441	5/13/16	8/21/17	Scaffold	"Laboratory of Applied Microbiology, Department of Food and Cosmetic Science, Faculty of Bioindustry, Tokyo University of Agriculture"	SAMD00051448	GCA_001949975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/975/GCA_001949975.1_ASM194997v1	27776911	FF30-6
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.08454	41.6	-	FTQQ01	2	973	911	3/18/17	3/24/17	Contig	Functional Genomics Genter Zurich	SAMEA4555932	GCA_900149555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/555/GCA_900149555.1_1-28a	-	-
Lysinibacillus sp. SG53	1500272	PRJEB17365	351546	Terrabacteria group	Firmicutes	4.71823	37.4	-	FOQQ01	36	4658	4436	10/30/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02787080	GCA_900113785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/785/GCA_900113785.1_IMG-taxon_2585428102_annotated_assembly	-	SG53
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.52013	35.4	-	LZGZ01	360	2430	2214	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179604	GCA_001690515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/515/GCA_001690515.1_ASM169051v1	-	Fer4-1
Piscirickettsia salmonis	1238	PRJNA306730	306730	Proteobacteria	Gammaproteobacteria	3.51555	39.8346	chromosome:NZ_CP013791.1/CP013791.1; plasmid p1PS8:NZ_CP013792.1/CP013792.1; plasmid p2PS8:NZ_CP013793.1/CP013793.1; plasmid p3PS8:NZ_CP013794.1/CP013794.1; plasmid p4PS8:NZ_CP013795.1/CP013795.1	-	5	3613	3230	1/4/17	4/6/17	Complete Genome	ADL Diagnostic Chile Ltda	SAMN04362179	GCA_001932855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/855/GCA_001932855.1_ASM193285v1	-	AY6297B
Salinivibrio sp. ML198	1909458	PRJNA368707	368707	Proteobacteria	Gammaproteobacteria	3.43371	50.5	-	MUEZ01	87	3117	3008	2/14/17	2/22/17	Contig	Universidad de Sevilla	SAMN06270280	GCA_001996015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/015/GCA_001996015.1_ASM199601v1	-	ML198
Pseudobutyrivibrio sp. UBA4234	1947301	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.38504	36	-	DGXK01	132	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450914	GCA_002396275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/275/GCA_002396275.1_ASM239627v1	28894102	-
uncultured Roseburia sp.	512314	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.87116	40.7	-	FMEB01	41	2702	2657	8/16/16	8/16/16	Scaffold	SC	SAMEA3545294	GCA_900066395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/395/GCA_900066395.1_13414_6_70	-	-
uncultured Faecalibacterium sp.	259315	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.94902	55.8	-	FMFD01	64	2834	2764	8/16/16	8/16/16	Scaffold	SC	SAMEA3545229	GCA_900066125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/125/GCA_900066125.1_13414_6_4	-	-
Helicobacter sp. UBA716	1946589	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	1.50265	36.9	-	DBLU01	106	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453695	GCA_002297555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/555/GCA_002297555.1_ASM229755v1	28894102	-
Sphingopyxis sp. H053	1759067	PRJNA294421	294421	Proteobacteria	Alphaproteobacteria	5.13	64.7	-	LNRU01	26	4853	4711	12/15/15	4/11/17	Contig	US EPA	SAMN04252880	GCA_001468225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/225/GCA_001468225.1_ASM146822v1	-	H053
Leifsonia sp. NCR5	1978342	PRJNA382297	382297	Terrabacteria group	Actinobacteria	4.2224	69	-	NCSR01	54	4021	3902	4/24/17	4/26/17	Contig	LaTrobe University	SAMN06703189	GCA_002105485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/485/GCA_002105485.1_ASM210548v1	-	NCR5
Ensifer sp. LC163	1120652	PRJNA328912	328912	Proteobacteria	Alphaproteobacteria	6.52151	62	-	MBSS01	68	6154	5893	7/28/16	4/13/17	Contig	Monash University Malaysia	SAMN05384004	GCA_001695855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/855/GCA_001695855.1_LC163_v1	-	LC163
Butyrivibrio sp. WCE2006	1410611	PRJNA223455	223455	Terrabacteria group	Firmicutes	4.52865	39.5	-	JNKH01	94	3973	3778	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841183	GCA_000701985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/985/GCA_000701985.1_ASM70198v1	-	WCE2006
Streptomyces rimosus subsp. rimosus	132474	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.63971	72	-	JOCQ01	292	8426	7913	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645423	GCA_000720725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/725/GCA_000720725.1_ASM72072v1	-	NRRL WC-3904
Curtobacterium sp. MMLR14_002	1898741	PRJNA342146	342146	Terrabacteria group	Actinobacteria	3.80868	70.7	-	MJGT01	137	3563	3448	11/2/16	4/17/17	Scaffold	Massachusetts Institute of Technology	SAMN05736479	GCA_001864975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/975/GCA_001864975.1_ASM186497v1	-	MMLR14_002
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.78748	58.8	-	LNWP01	67	4596	4450	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339853	GCA_001681525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/525/GCA_001681525.1_ASM168152v1	-	F3871
Raoultella ornithinolytica	54291	PRJEB7657	277159	Proteobacteria	Gammaproteobacteria	6.31602	55	-	FXWO01	7	6275	5926	5/18/17	5/24/17	Contig	SC	SAMEA3181514	GCA_900184005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/184/005/GCA_900184005.1_15682_8_85	-	3380STDY6027361
Blastomonas sp. CCH11-A4	1768782	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	3.94731	64.2	-	LSKB01	122	3864	3698	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299478	GCA_001556925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/925/GCA_001556925.1_ASM155692v1	-	CCH11-A4
Massilia sp. UBA2117	1946836	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	4.91156	65.7	-	DCYF01	175	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455335	GCA_002331755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/755/GCA_002331755.1_ASM233175v1	28894102	-
uncultured Blautia sp.	765821	PRJEB10915	297013	Terrabacteria group	Firmicutes	4.02359	44.4	-	FMEX01	48	3693	3632	8/16/16	8/16/16	Scaffold	SC	SAMEA3545244	GCA_900066145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/145/GCA_900066145.1_13414_6_20	-	-
Gordonia sp. IITR100	1314686	PRJNA376065	376065	Terrabacteria group	Actinobacteria	5.28549	67.9	-	MVKV01	56	4762	4559	3/2/17	3/4/17	Scaffold	Indian Institute of Technology Delhi	SAMN06349878	GCA_002009645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/645/GCA_002009645.1_ASM200964v1	-	IITR100
Elizabethkingia meningoseptica	238	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	3.85364	36.4	-	LNOH01	24	3462	3383	1/21/16	4/6/17	Scaffold	CDC	SAMN04254555	GCA_001521755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/755/GCA_001521755.1_ASM152175v1	26966213	KC1913
Mycobacterium fortuitum	1766	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.74565	66.1	-	LZLZ01	360	6651	6183	6/17/16	4/5/17	Contig	JCVI	SAMN04634192	GCA_001673485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/485/GCA_001673485.1_ASM167348v1	-	1242461
Cupriavidus sp. YR651	1855315	PRJEB15751	347667	Proteobacteria	Betaproteobacteria	6.96012	64.8	-	FMYZ01	46	6358	6126	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216345	GCA_900101625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/625/GCA_900101625.1_IMG-taxon_2615840592_annotated_assembly	-	YR651
Microbacterium sp. Leaf351	1736348	PRJNA297956	297956	Terrabacteria group	Actinobacteria	2.8888	70.2	-	LMPK01	38	2832	2293	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151738	GCA_001423825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/825/GCA_001423825.1_Leaf351	26633631	Leaf351
Snodgrassella alvi	1196083	PRJNA339423	339423	Proteobacteria	Betaproteobacteria	2.39992	41.3	-	NAGX01	214	2184	2034	4/13/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603553	GCA_002088675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/675/GCA_002088675.1_ASM208867v1	-	A12
Xanthomonas translucens pv. graminis	134874	PRJEB10861	357899	Proteobacteria	Gammaproteobacteria	4.10033	68.8	-	FLTZ01	299	3492	3233	12/16/16	4/6/17	Contig	CEBITEC	SAMEA4071040	GCA_900092495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/495/GCA_900092495.1_6431	-	-
Variovorax sp. CF313	1144315	PRJNA83053	83053	Proteobacteria	Betaproteobacteria	6.02917	66.8	-	AKIW01	173	5616	5426	7/27/12	5/19/17	Scaffold	Oak Ridge National Lab	SAMN00839623	GCA_000282635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/635/GCA_000282635.1_Variovorax.strCF313_v1.0	23045501	CF313
Mesorhizobium sp. L103C119B0	1287085	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.72784	62.5	-	AYXE01	75	6641	6078	12/3/13	4/9/17	Contig	University of Southern California	SAMN02359650	GCA_000502235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/235/GCA_000502235.1_Mloti_L103C119B0	-	L103C119B0
Micavibrio sp. UBA2705	1946918	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.46007	44.7	-	DELD01	81	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06454563	GCA_002354205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/205/GCA_002354205.1_ASM235420v1	28894102	-
Cellulomonas sp. 73-92	1895740	PRJNA279279	279279	Terrabacteria group	Actinobacteria	3.70668	73.5	-	MKTH01	36	3510	3381	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660550	GCA_001898175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/175/GCA_001898175.1_ASM189817v1	-	-
Chryseobacterium sp. Leaf404	1736366	PRJNA297956	297956	FCB group	Bacteroidetes/Chlorobi group	3.93992	36.7	-	LMQM01	17	3643	3514	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151756	GCA_001424145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/145/GCA_001424145.1_Leaf404	26633631	Leaf404
Piscirickettsia salmonis	1238	PRJNA306730	306730	Proteobacteria	Gammaproteobacteria	3.5156	39.8346	chromosome 1:NZ_CP013811.1/CP013811.1; plasmid p1PS11:NZ_CP013812.1/CP013812.1; plasmid p2PS11:NZ_CP013813.1/CP013813.1; plasmid p3PS11:NZ_CP013814.1/CP013814.1; plasmid p4PS11:NZ_CP013815.1/CP013815.1	-	5	3611	3236	1/4/17	4/6/17	Complete Genome	ADL Diagnostic Chile Ltda	SAMN04376266	GCA_001932935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/935/GCA_001932935.1_ASM193293v1	-	AY3864B
Idiomarina sp. UBA4211	1946645	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.85703	45.9	-	DFTN01	163	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450688	GCA_002383045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/045/GCA_002383045.1_ASM238304v1	28894102	-
Halomonas sp. PBN3	1397528	PRJNA217943	217943	Proteobacteria	Gammaproteobacteria	3.66854	67.7	-	AXCA01	228	3473	3278	10/21/13	4/9/17	Contig	University of Illinois at Chicago	SAMN02345636	GCA_000475415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/415/GCA_000475415.1_De_Novo_assembly	24356826	PBN3
Sphingobium sp. Ndbn-10	1667223	PRJNA286262	286262	Proteobacteria	Alphaproteobacteria	5.02471	64.5	-	LFVX01	189	4791	4501	8/5/16	4/13/17	Contig	Nanjing Agricultural University	SAMN03777200	GCA_001699185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/185/GCA_001699185.1_ASM169918v1	-	Ndbn-10
Rothia sp. HMSC073B08	1739388	PRJNA300038	300038	Terrabacteria group	Actinobacteria	2.27221	59.5	-	LTXN01	46	1793	1700	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480051	GCA_001812975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/975/GCA_001812975.1_ASM181297v1	-	HMSC073B08
Rhodanobacter sp. C03	1945858	PRJNA369723	369723	Proteobacteria	Gammaproteobacteria	3.85704	63.1	-	MUNT01	21	3475	3383	2/16/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN06293014	GCA_002001175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/175/GCA_002001175.1_ASM200117v1	-	C03
Sphingobacterium sp. UBA1578	1947483	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	5.42835	39.6	-	DCOE01	31	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452372	GCA_002322295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/295/GCA_002322295.1_ASM232229v1	28894102	-
Megasphaera sp. UBA4233	1946847	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.65535	49.5	-	DGXL01	38	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450917	GCA_002395615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/615/GCA_002395615.1_ASM239561v1	28894102	-
Collinsella sp. UBA4258	1946387	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.74701	60	-	DGWM01	144	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451177	GCA_002396135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/135/GCA_002396135.1_ASM239613v1	28894102	-
Pseudonocardia sp. Ae406_Ps2	1885033	PRJNA336259	336259	Terrabacteria group	Actinobacteria	6.50225	73.7	-	MCIO01	27	6075	5729	1/4/17	4/17/17	Scaffold	University of East Anglia	SAMN05507019	GCA_001932415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/415/GCA_001932415.1_ASM193241v1	-	Ae406_Ps2
Neisseria sp. HMSC058F07	1715175	PRJNA296303	296303	Proteobacteria	Betaproteobacteria	2.26179	49.1	-	LTIN01	51	2236	2094	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477541	GCA_001810035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/035/GCA_001810035.1_ASM181003v1	-	HMSC058F07
Campylobacter sp. 114	2039338	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.64056	30.6	-	NXAZ01	31	1685	1572	9/27/17	9/27/17	Contig	University of California at Davis	SAMN05711879	GCA_002383845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/845/GCA_002383845.1_ASM238384v1	-	114
Alistipes sp. N15.MGS-157	1637503	PRJNA277012	277012	FCB group	Bacteroidetes/Chlorobi group	2.17149	56.8	-	LARG01	53	-	-	4/24/15	6/10/15	Contig	The Mayo Clinic	SAMN03449999	GCA_000980225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/225/GCA_000980225.1_ASM98022v1	26021920	-
Propionibacterium sp. HMSC062D02	1739499	PRJNA300149	300149	Terrabacteria group	Actinobacteria	2.53966	60	-	LTTX01	13	2557	2405	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480416	GCA_001814915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/915/GCA_001814915.1_ASM181491v1	-	HMSC062D02
Ralstonia sp. UBA689	1947373	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	5.21617	64.1	-	DBMV01	48	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457065	GCA_002298975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/975/GCA_002298975.1_ASM229897v1	28894102	-
Actinomyces sp. HMSC08A09	1581133	PRJNA269902	269902	Terrabacteria group	Actinobacteria	3.04674	68.8	-	LWNX01	87	2574	2413	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03434240	GCA_001807465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/465/GCA_001807465.1_ASM180746v1	-	HMSC08A09
Prochlorococcus sp. HOT208_60m_813G15	1961090	PRJNA375759	375759	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.40514	31.2	-	MWOS01	236	1556	1432	3/14/17	3/16/17	Contig	Massachusetts Institute of Technology	SAMN06345450	GCA_002026165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/165/GCA_002026165.1_ASM202616v1	-	HOT208_60m_813G15
Shigella sp. FC1882	1886515	PRJNA338024	338024	Proteobacteria	Gammaproteobacteria	4.47691	50.7	-	MDDI01	531	4787	3995	8/24/16	8/24/16	Contig	Christian Medical College	SAMN05520376	GCA_001712595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/595/GCA_001712595.1_ASM171259v1	-	FC1882
Exiguobacterium sp. AT1b	360911	PRJNA348157	348157	Terrabacteria group	Firmicutes	2.72793	47.5	-	MOEL01	21	2830	2726	12/19/16	4/16/17	Contig	Civil Aviation General Hospital	SAMN05904732	GCA_001908175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/175/GCA_001908175.1_ASM190817v1	-	AT1b
Bacteroides sp. 1_1_30	457387	PRJNA41955	41955	FCB group	Bacteroidetes/Chlorobi group	6.48053	42.3	-	ADCL01	73	5370	5023	6/13/11	5/18/17	Scaffold	Broad Institute	SAMN02463820	GCA_000218365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/365/GCA_000218365.1_Bacteroides_sp_1_1_30_V1	-	1_1_30
Thioalkalivibrio sp. ALJ24	545276	PRJNA178478	178478	Proteobacteria	Gammaproteobacteria	2.8149	67.5	-	ARIZ01	20	2683	2562	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441670	GCA_000377785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/785/GCA_000377785.1_ASM37778v1	-	ALJ24
Ruminococcus sp. CAG:254	1262953	PRJEB790	206576	Terrabacteria group	Firmicutes	2.2454	45.8	-	CBAR01	158	2000	1961	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138569	GCA_000433635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/635/GCA_000433635.1_MGS254	-	-
Paenibacillus sp. J14	935845	PRJNA210211	210211	Terrabacteria group	Firmicutes	4.86104	51.8	-	JADQ01	112	4471	4244	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02584981	GCA_000518465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/465/GCA_000518465.1_ASM51846v1	-	J14
Stenotrophomonas sp. 14-69-23	1970438	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	3.22093	69.2	-	NCKI01	30	2869	2788	8/16/17	8/16/17	Contig	None	SAMN06622194	GCA_002282775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/775/GCA_002282775.1_ASM228277v1	-	-
Brevundimonas sp. 12-68-7	1970327	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	3.18546	68.4	-	NCCM01	253	3347	3072	8/16/17	8/16/17	Scaffold	None	SAMN06622398	GCA_002279665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/665/GCA_002279665.1_ASM227966v1	-	-
Eubacterium sp. CAG:156	1262880	PRJEB728	206658	Terrabacteria group	Firmicutes	2.45045	32.3	-	CBBN01	85	2115	2092	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138603	GCA_000434315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/315/GCA_000434315.1_MGS156	-	-
Janthinobacterium sp. HH107	1537279	PRJNA309041	309041	Proteobacteria	Betaproteobacteria	6.15588	63.1	-	LRID01	116	5517	5353	10/11/16	4/13/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04320691	GCA_001758765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/765/GCA_001758765.1_ASM175876v1	27833590	HH107
Caulobacter sp. JGI 0001013-O16	1157681	PRJNA169704	169704	Proteobacteria	Alphaproteobacteria	1.85898	67.8	-	AQWG01	316	-	-	4/20/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441389	GCA_000376365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/365/GCA_000376365.1_ASM37636v1	-	JGI 0001013-O16
Psychrobacter sp. JB385	1434841	PRJEB19048	374424	Proteobacteria	Gammaproteobacteria	3.29841	43.3	-	FUKN01	14	2785	2716	2/11/17	5/31/17	Contig	MICALIS	SAMEA81163168	GCA_900163785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/785/GCA_900163785.1_ASM90016378v1	-	JB385
Acidovorax sp. Root267	1736505	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	5.67613	64.7	-	LMJC01	34	5186	5063	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155774	GCA_001429215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/215/GCA_001429215.1_Root267	26633631	Root267
Marinobacter sp. C18	1772288	PRJNA306252	306252	Proteobacteria	Gammaproteobacteria	4.93453	56.9	-	LQXJ01	42	4606	4478	12/29/16	4/16/17	Contig	Duke University Marine Lab	SAMN04348900	GCA_001924925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/924/925/GCA_001924925.1_ASM192492v1	-	C18
Sulfitobacter sp. UBA4523	1947584	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.35078	59.9	-	DGMH01	75	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456081	GCA_002388305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/305/GCA_002388305.1_ASM238830v1	28894102	-
Erythrobacter sp. QSSC1-22B	1860125	PRJNA325403	325403	Proteobacteria	Alphaproteobacteria	3.34473	63.5	-	LZRP01	49	3196	3064	7/3/16	4/13/17	Contig	University of Tasmania	SAMN05231707	GCA_001678665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/665/GCA_001678665.1_ASM167866v1	-	QSSC1-22B
Nocardioides sp. Soil796	1736412	PRJNA298127	298127	Terrabacteria group	Actinobacteria	5.28866	69.5	-	LMSQ01	22	5079	4912	11/2/15	4/11/17	Scaffold	ETH Zurich	SAMN04155677	GCA_001429525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/525/GCA_001429525.1_Soil796	26633631	Soil796
Methylobacterium sp. Leaf88	1736244	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	5.03127	69.5	-	LMMK01	55	4659	4440	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151624	GCA_001422795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/795/GCA_001422795.1_Leaf88	26633631	Leaf88
Citrobacter sp. BIDMC108	1686385	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.43409	51.7	-	LESU01	14	5407	5109	6/19/15	4/10/17	Scaffold	Broad Institute	SAMN03280170	GCA_001037585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/585/GCA_001037585.1_Citr_freu_complex_BIDMC108_V1	-	BIDMC108
Treponema sp. UBA785	1947757	PRJNA348753	348753	Spirochaetes	Spirochaetia	2.13234	39.5	-	DBJD01	101	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451160	GCA_002297065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/065/GCA_002297065.1_ASM229706v1	28894102	-
Novosphingobium sp. B1	1938756	PRJEB20346	382089	Proteobacteria	Alphaproteobacteria	4.64071	62.7	-	FWXL01	68	4417	4219	4/8/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06272759	GCA_900176395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/395/GCA_900176395.1_IMG-taxon_2710724202_annotated_assembly	-	B1
Lactobacillus sp. HMSC075D02	1739469	PRJNA300119	300119	Terrabacteria group	Firmicutes	3.04005	46.5	-	LTVA01	172	3069	2844	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480390	GCA_001814335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/335/GCA_001814335.1_ASM181433v1	-	HMSC075D02
Enterococcus sp. HMSC077E07	1739331	PRJNA299981	299981	Terrabacteria group	Firmicutes	2.97696	37.6	-	LTFE01	274	3078	2883	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477640	GCA_001811925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/925/GCA_001811925.1_ASM181192v1	-	HMSC077E07
Prevotella sp. oral taxon 306 str. F0472	1095752	PRJNA75153	75153	FCB group	Bacteroidetes/Chlorobi group	2.94577	41.3	-	AJIN01	74	2509	2342	4/5/12	4/17/17	Contig	J. Craig Venter Institute	SAMN00761833	GCA_000257925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/925/GCA_000257925.1_PspF0472v1.0	-	F0472
Pantoea sp. RIT-PI-b	1681195	PRJNA289424	289424	Proteobacteria	Gammaproteobacteria	5.27169	54.5	-	LGIS01	35	4874	4724	7/28/15	4/10/17	Contig	Monash University Malaysia	SAMN03853641	GCA_001187905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/905/GCA_001187905.1_ASM118790v1	26586879	RIT-PI-b
Polaromonas sp. 35-63-240	1970417	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	3.00473	62.5	-	NCFW01	549	3132	2824	8/16/17	8/16/17	Scaffold	None	SAMN06622310	GCA_002281395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/395/GCA_002281395.1_ASM228139v1	-	-
Serratia sp. TEL	1656220	PRJNA284289	284289	Proteobacteria	Gammaproteobacteria	5.00054	59.3	-	LDEG01	19	4721	4559	5/21/15	4/18/17	Contig	University of the Witwatersrand	SAMN03701014	GCA_001011075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/075/GCA_001011075.1_ASM101107v1	26159531	TEL
Mycobacterium sp. URHD0025	1298864	PRJNA190837	190837	Terrabacteria group	Actinobacteria	6.65712	66.3	-	AUEQ01	30	6336	6190	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440855	GCA_000426065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/065/GCA_000426065.1_ASM42606v1	-	URHD0025
Streptococcus sp. DD04	1776578	PRJNA304333	304333	Terrabacteria group	Firmicutes	2.19975	42.3	-	LQOH01	61	2070	1859	3/2/16	4/11/17	Scaffold	University of Kaiserslautern	SAMN04324323	GCA_001578725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/725/GCA_001578725.1_ASM157872v1	27303717	DD04
Bradyrhizobium sp. Ec3.3	189753	PRJNA163013	163013	Proteobacteria	Alphaproteobacteria	10.0345	62.6	-	AXAS01	154	9477	8845	9/30/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441127	GCA_000472925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/925/GCA_000472925.1_ASM47292v1	-	Ec3.3
Shewanella sp. Shew256	1969376	PRJNA379161	379161	Proteobacteria	Gammaproteobacteria	5.34014	47.9	-	NAJR01	64	4866	4674	6/16/17	6/21/17	Contig	"Hospital de clinicas ""Jose de San Martin"""	SAMN06602701	GCA_002196695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/695/GCA_002196695.1_ASM219669v1	-	Shew256
Escherichia sp. B1147	754307	PRJNA286916	286916	Proteobacteria	Gammaproteobacteria	4.57072	50.6	-	LFHY01	43	4581	4293	6/8/16	2/25/17	Contig	U.S. Food and Drug Administration	SAMN03775335	GCA_001660175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/175/GCA_001660175.1_ASM166017v1	-	B1147
Arthrobacter sp. 131MFCol6.1	1157944	PRJNA175167	175167	Terrabacteria group	Actinobacteria	4.43238	67.2	-	ARGT01	24	3991	3858	4/19/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441022	GCA_000374925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/925/GCA_000374925.1_ASM37492v1	-	131MFCol6.1
Corynebacterium sp. KPL1817	1203558	PRJNA169438	169438	Terrabacteria group	Actinobacteria	2.45314	58.5	-	AXMB01	10	2334	2225	10/21/13	4/17/17	Scaffold	Broad Institute	SAMN02597008	GCA_000478155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/155/GCA_000478155.1_Cory_sp_KPL1817_V1	-	KPL1817
Staphylococcus sp. HMSC062E10	1715032	PRJNA296159	296159	Terrabacteria group	Firmicutes	2.56784	33.7	-	LTKJ01	45	2441	2363	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04495805	GCA_001809105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/105/GCA_001809105.1_ASM180910v1	-	HMSC062E10
Enterobacter sp. BIDMC 28	1329840	PRJNA202039	202039	Proteobacteria	Gammaproteobacteria	5.18797	55.3	-	JCLC01	6	5094	4849	2/3/14	4/10/17	Scaffold	Broad Institute	SAMN02138658	GCA_000534395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/395/GCA_000534395.1_Ente_cloa_complex_BIDMC_28_V1	-	BIDMC 28
Rhodococcus sp. Leaf247	1736307	PRJNA297956	297956	Terrabacteria group	Actinobacteria	4.53361	67.1	-	LMRP01	5	4241	4119	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151697	GCA_001426185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/185/GCA_001426185.1_Leaf247	26633631	Leaf247
Piscirickettsia salmonis	1238	PRJNA306730	306730	Proteobacteria	Gammaproteobacteria	3.5156	39.8346	chromosome 1:NZ_CP013816.1/CP013816.1; plasmid p1PS10:NZ_CP013817.1/CP013817.1; plasmid p2PS10:NZ_CP013818.1/CP013818.1; plasmid p3PS10:NZ_CP013819.1/CP013819.1; plasmid p4PS10:NZ_CP013820.1/CP013820.1	-	5	3611	3236	9/26/16	4/5/17	Complete Genome	ADL Diagnostic Chile Ltda	SAMN04376258	GCA_001746795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/795/GCA_001746795.1_ASM174679v1	-	AY3800B
Sphingomonas sp. Leaf28	1735695	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.45469	65.9	-	LMKX01	14	4059	3921	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151591	GCA_001421685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/685/GCA_001421685.1_ASM142168v1	26633631	Leaf28
Clostridium sp. HMSC19B01	1581180	PRJNA269809	269809	Terrabacteria group	Firmicutes	4.08355	28.5	-	LWPI01	101	3754	3648	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436139	GCA_001806545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/545/GCA_001806545.1_ASM180654v1	-	HMSC19B01
Methanosarcina sp. Kolksee	1434099	PRJNA230954	230954	Euryarchaeota	Methanomicrobia	4.55349	39.8331	chromosome:NZ_CP009524.1/CP009524.1; plasmid unnamed:NZ_CP009523.1/CP009523.1	-	2	3764	3553	4/7/15	4/10/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN03074590	GCA_000969945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/945/GCA_000969945.1_ASM96994v1	-	Kolksee
Frankia sp. CgIS1	1745381	PRJNA299691	299691	Terrabacteria group	Actinobacteria	5.25715	70	-	MBLP01	135	4654	4255	10/26/16	4/13/17	Contig	University of New Hampshire	SAMN04211879	GCA_001854725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/725/GCA_001854725.1_ASM185472v1	-	CgIS1
Flavobacterium sp. MEB061	1587524	PRJNA270642	270642	FCB group	Bacteroidetes/Chlorobi group	5.74711	33.6	-	JXQR01	80	4867	4778	2/9/15	4/10/17	Contig	University of Chicago	SAMN03267948	GCA_000834715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/715/GCA_000834715.1_ASM83471v1	-	MEB061
Klebsiella sp. RIT-PI-d	1681196	PRJNA289425	289425	Proteobacteria	Gammaproteobacteria	4.25626	52.1	-	LGIT01	20	3986	3805	7/28/15	2/21/17	Contig	Monash University Malaysia	SAMN03853642	GCA_001187865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/865/GCA_001187865.1_ASM118786v1	26586879	RIT-PI-d
Acinetobacter sp. NIPH 899	1217710	PRJNA183307	183307	Proteobacteria	Gammaproteobacteria	3.82012	42	-	APPE01	32	3758	3455	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01828167	GCA_000368385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/385/GCA_000368385.1_Acin_sp_NIPH_899_V1	-	NIPH 899
Bordetella holmesii CDC-H643-BH	1331209	PRJNA202121	202121	Proteobacteria	Betaproteobacteria	3.61498	62.8	-	JGWD01	193	3669	3220	5/1/14	4/2/17	Contig	JCVI	SAMN02263916	GCA_000662195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/195/GCA_000662195.1_gbb13v01	24948754	CDC-H643-BH
Paeniclostridium sordellii	1505	PRJEB8136	277661	Terrabacteria group	Firmicutes	3.41982	27.4	-	CELA01	22	3344	3232	3/13/15	4/4/17	Contig	WTSI	SAMEA1572084	GCA_001372615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/615/GCA_001372615.1_W3025	-	W3025
Calothrix sp. PCC 6303	1170562	PRJNA158041	158041	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.96039	39.8015	chromosome:NC_019751.1/CP003610.1; plasmid pCAL6303.01:NC_019727.1/CP003611.1; plasmid pCAL6303.02:NC_019728.1/CP003612.1; plasmid pCAL6303.03:NC_019752.1/CP003613.1	-	4	5713	5465	12/6/12	5/18/17	Complete Genome	JGI	SAMN02261327	GCA_000317435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/435/GCA_000317435.1_ASM31743v1	-	PCC 6303
Staphylococcus equorum	246432	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.95713	32.8	-	LNMY01	53	2913	2767	9/28/16	4/5/17	Scaffold	Tufts University	SAMN04244252	GCA_001747865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/865/GCA_001747865.1_ASM174786v1	-	862_5
Sphingobacterium mizutaii	1010	PRJEB6403	251923	FCB group	Bacteroidetes/Chlorobi group	4.65305	39.8	chromosome 1:NZ_LT906468.1/LT906468.1	-	1	4034	3922	8/15/17	8/28/17	Complete Genome	SC	SAMEA4412673	GCA_900187125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/125/GCA_900187125.1_50592_G01	-	NCTC12149
Pseudomonas chlororaphis subsp. aureofaciens	587851	PRJNA290438	290438	Proteobacteria	Gammaproteobacteria	7.02285	62.7	-	LHVA01	45	6426	6237	8/18/15	4/4/17	Contig	JLU	SAMN03891665	GCA_001269575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/575/GCA_001269575.1_ASM126957v1	-	LMG 1245
Enterococcus cecorum	44008	PRJNA268097	268097	Terrabacteria group	Firmicutes	2.28199	36.6	chromosome:CP010061.1	-	1	-	-	10/16/15	10/16/15	Chromosome	NC State University	SAMN03203013	GCA_001318265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/265/GCA_001318265.1_ASM131826v1	-	SA2
Vibrio cyclitrophicus ZF65	1136169	PRJNA81883	81883	Proteobacteria	Gammaproteobacteria	4.91095	43.6	-	AIDK02	92	4292	4196	3/26/12	4/5/17	Scaffold	Massachusetts Institute of Technology	SAMN02470463	GCA_000256325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/325/GCA_000256325.2_ASM25632v2	22491847	ZF65
Pseudomonas fragi	296	PRJNA397499	397499	Proteobacteria	Gammaproteobacteria	5.01381	58.3	-	NQKT01	61	4633	4472	8/24/17	8/27/17	Scaffold	CSIRO Agriculture and Food	SAMN07459803	GCA_002269595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/595/GCA_002269595.1_ASM226959v1	-	F1792
Pseudoalteromonas luteoviolacea	43657	PRJNA321554	321554	Proteobacteria	Gammaproteobacteria	6.06898	42.7	-	MAUJ01	90	5154	4916	7/28/16	4/5/17	Scaffold	University of Hawaii at Hilo	SAMN04999933	GCA_001696455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/455/GCA_001696455.1_ASM169645v1	-	IPB1
Elizabethkingia anophelis 502	1355388	PRJNA176121	176121	FCB group	Bacteroidetes/Chlorobi group	3.96066	35.5	-	AVCQ01	21	3632	3520	8/15/13	4/1/17	Contig	University of Birmingham	SAMN02471026	GCA_000447375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/375/GCA_000447375.1_C874_spades	24812216	502
Xanthomonas arboricola pv. pruni	69929	PRJNA305230	305230	Proteobacteria	Gammaproteobacteria	5.05907	65.4	-	LOMI01	77	4423	4063	9/21/16	4/5/17	Scaffold	INRA	SAMN04320685	GCA_001741965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/741/965/GCA_001741965.1_ASM174196v1	-	CFBP 3894
Salinispora pacifica DSM 45543	999542	PRJNA74383	74383	Terrabacteria group	Actinobacteria	5.45829	69.6	-	AQZB01	1	5102	4808	4/22/13	4/1/17	Scaffold	JGI	SAMN02261274	GCA_000383995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/995/GCA_000383995.1_ASM38399v1	-	DSM 45543
Leptospira kirschneri serovar Mozdok	437752	PRJNA298236	298236	Spirochaetes	Spirochaetia	4.45992	35.9	-	LLJK01	44	4036	3681	10/21/15	4/4/17	Contig	School of Veterinary Medicine and Animal Science / University of Sao Paulo	SAMN04156848	GCA_001401895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/895/GCA_001401895.1_ASM140189v1	-	M36/05
Sphingobacterium sp. G1-14	2003121	PRJNA387067	387067	FCB group	Bacteroidetes/Chlorobi group	6.32568	39.8	chromosome:NZ_CP021381.1/CP021381.1	-	1	5419	5229	6/15/17	6/19/17	Complete Genome	changzhou university	SAMN07138959	GCA_002196555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/555/GCA_002196555.1_ASM219655v1	-	G1-14
Rhodococcus fascians NBRC 12155 = LMG 3623	1219015	PRJNA233522	233522	Terrabacteria group	Actinobacteria	5.77479	64.4	-	JMEN01	30	5427	5271	9/30/14	4/18/17	Scaffold	Oregon State University	SAMN02570003	GCA_000761055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/055/GCA_000761055.1_R_fas_LMG3623	-	LMG 3623
Acinetobacter ursingii	108980	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.38593	40.1	-	DGFW01	46	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453106	GCA_002391885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/885/GCA_002391885.1_ASM239188v1	28894102	-
Campylobacter lanienae	75658	PRJNA340992	340992	Proteobacteria	delta/epsilon subdivisions	1.5391	34.6	-	MJJF01	29	1580	1499	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687012	GCA_002139235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/235/GCA_002139235.1_ASM213923v1	28854596	P0034
Leclercia adecarboxylata	83655	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.00522	55.9	-	DDAU01	34	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452156	GCA_002332675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/675/GCA_002332675.1_ASM233267v1	28894102	-
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28442	32.4	chromosome:AP017596.1	-	1	-	-	1/24/17	1/27/17	Chromosome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053867	GCA_002356815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/815/GCA_002356815.1_ASM235681v1	-	M14012
Vibrio campbellii	680	PRJDB3039	271954	Proteobacteria	Gammaproteobacteria	5.77771	45.5	-	BBKG01	209	5369	5135	1/7/15	4/2/17	Contig	University of Miyazaki	SAMD00019132	GCA_000818235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/235/GCA_000818235.1_V_campbellii_051011G_1.0	25527835	051011G
Mycobacterium chelonae	1774	PRJNA347845	347845	Terrabacteria group	Actinobacteria	4.98412	63.9	-	MLIT01	14	4914	4779	10/26/16	4/5/17	Contig	University of Georgia	SAMN05898001	GCA_001853895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/895/GCA_001853895.1_ASM185389v1	-	15519
Actinomyces naeslundii	1655	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.22986	67.8	-	MSRN01	33	2743	2613	1/18/17	4/6/17	Scaffold	King's College London	SAMN05898705	GCA_001956575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/575/GCA_001956575.1_ASM195657v1	-	S65A
Geobacillus sp. MAS1	1408282	PRJNA222590	222590	Terrabacteria group	Firmicutes	3.49741	52.2	-	AYSF01	121	3722	3280	11/25/13	4/9/17	Scaffold	University of Georgia	SAMN02371536	GCA_000498995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/995/GCA_000498995.1_GTMas1.0	24903880	MAS1
Streptococcus sobrinus TCI-119	1074067	PRJNA71903	71903	Terrabacteria group	Firmicutes	2.08361	43.5	-	AGGQ01	398	2122	1859	10/6/11	3/30/17	Contig	JCVI	SAMN02436621	GCA_000228085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/085/GCA_000228085.2_SMUT1-NEX_50-119	-	TCI-119
Morganella morganii	582	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	4.06935	51	-	NDBP01	55	3981	3821	6/8/17	6/10/17	Contig	JCVI	SAMN06218048	GCA_002180575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/575/GCA_002180575.1_ASM218057v1	-	39876
Enterococcus hirae	1354	PRJNA342049	342049	Terrabacteria group	Firmicutes	2.76475	37	-	MJDT01	235	2626	2445	4/3/17	4/5/17	Contig	Lethbridge Research Centre	SAMN05735017	GCA_002077545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/545/GCA_002077545.1_ASM207754v1	28270110	F1129D 233
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.73549	66.5	-	LOTZ01	128	8107	7663	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449161	GCA_001521915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/915/GCA_001521915.1_ASM152191v1	-	INT3-BP98
Pantoea agglomerans pv. gypsophilae	48984	PRJNA320975	320975	Proteobacteria	Gammaproteobacteria	4.98907	54.8	-	LXSX01	55	4762	4520	6/13/16	4/5/17	Scaffold	Tel-Aviv University	SAMN04961658	GCA_001661985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/661/985/GCA_001661985.1_ASM166198v1	-	824-1
Mycobacterium africanum MAL010123	1354178	PRJNA211663	211663	Terrabacteria group	Actinobacteria	4.38513	65.6	-	JKZZ01	2	4235	4041	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02231130	GCA_000666685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/685/GCA_000666685.1_Myco_afri_MAL010123_V1	-	MAL010123
Gallibacterium anatis	750	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.48338	39.9	-	JPJK01	79	2339	2228	11/5/14	4/2/17	Contig	University of Copenhagen	SAMN02900740	GCA_000772365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/365/GCA_000772365.1_ASM77236v1	-	12158-5
Leptospira weilii str. UI 14631	1088544	PRJNA74243	74243	Spirochaetes	Spirochaetia	4.31315	40.7	-	AHQY01	431	4220	3930	2/3/12	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00739394	GCA_000246655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/655/GCA_000246655.2_CLC_glsol172	-	UI 14631
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.3071	64.1	-	FVCF01	19	5365	5197	3/10/17	3/18/17	Contig	SC	SAMEA2068672	GCA_900131135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/135/GCA_900131135.1_10665_3_58	-	228
Aeromonas veronii	654	PRJNA296464	296464	Proteobacteria	Gammaproteobacteria	4.67994	58.6	-	LKKB01	59	4342	4118	11/19/15	4/4/17	Contig	Texas Tech University	SAMN04099662	GCA_001446755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/755/GCA_001446755.1_ASM144675v1	26824353	TTU2014-134ASC
Corynebacterium ulcerans	65058	PRJNA277222	277222	Terrabacteria group	Actinobacteria	2.42822	53.4	-	JZUS01	10	2168	1772	5/5/15	5/27/15	Contig	Laboratoire de sante publique du Quebec	SAMN03387456	GCA_000988285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/285/GCA_000988285.1_ASM98828v1	-	LSPQ-04227
Leuconostoc pseudomesenteroides	33968	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.91243	39.1	-	MPLG01	88	1964	1769	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981495	GCA_002092555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/555/GCA_002092555.1_ASM209255v1	28217118	LN02
Klebsiella aerogenes MGH 77	1439322	PRJNA234117	234117	Proteobacteria	Gammaproteobacteria	5.30928	54.9	-	JMUN01	8	5189	4923	5/19/14	4/10/17	Scaffold	Broad Institute	SAMN02581250	GCA_000692195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/195/GCA_000692195.1_Ente_aero_MGH_77_V1	-	MGH 77
Streptobacillus moniliformis	34105	PRJNA319313	319313	Fusobacteria	Fusobacteriia	1.59186	26.4	-	LWSZ01	188	1444	1321	6/4/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04892737	GCA_001657755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/755/GCA_001657755.1_ASM165775v1	-	CIP 81-99
Xanthomonas perforans	442694	PRJNA276679	276679	Proteobacteria	Gammaproteobacteria	5.17986	64.8	-	JZVV01	78	4714	4356	5/18/15	4/3/17	Contig	Universidade de Sao Paulo	SAMN03379909	GCA_001010025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/025/GCA_001010025.1_ASM101002v1	26089818	GEV1001
Streptococcus pseudopneumoniae	257758	PRJNA294730	294730	Terrabacteria group	Firmicutes	2.20799	39.7	-	LJHJ01	188	2373	2074	9/30/15	4/4/17	Contig	Aarhus University	SAMN04031604	GCA_001304655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/655/GCA_001304655.1_ASM130465v1	27100044	276-03
Kingella kingae PV1748	1305795	PRJEB1652	194472	Proteobacteria	Betaproteobacteria	1.99214	46.7	-	CBSP01	1	1979	1670	9/11/13	4/1/17	Scaffold	URMITE	SAMEA2272527	GCA_000470175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/175/GCA_000470175.1_PV1748	-	PV1748
Vibrio anguillarum	55601	PRJNA267172	267172	Proteobacteria	Gammaproteobacteria	4.19424	44.8335	chromosome I:CP011470.1; chromosome II:CP011471.1; plasmid pJM1:CP016257.1	-	3	3492	3378	2/7/17	2/7/17	Chromosome	University of Copenhagen	SAMN03178171	GCA_001989755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/755/GCA_001989755.1_ASM198975v1	-	178/90
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.91721	55.1	-	JTCE02	132	4873	4602	11/17/14	3/25/17	Contig	JCVI	SAMN03012829	GCA_000784135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/135/GCA_000784135.2_ASM78413v2	-	ND23
Actinomyces oris	544580	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.10469	68.8	-	MSKT01	42	2592	2472	1/5/17	4/6/17	Scaffold	King's College London	SAMN05898721	GCA_001937715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/715/GCA_001937715.1_ASM193771v1	-	A7A-1
Haemophilus parainfluenzae	729	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.12938	39.2	-	LZMX01	31	2074	1970	7/5/16	4/5/17	Scaffold	TAILORED-Treatment project	SAMN05219282	GCA_001679325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/325/GCA_001679325.1_ASM167932v1	-	CCUG 62654
Agrobacterium sp. DSM 25559	1907666	PRJEB15705	369059	Proteobacteria	Alphaproteobacteria	5.65233	56.5	-	FMUE01	44	5434	5153	1/27/17	4/17/17	Contig	CEBITEC	SAMEA4504211	GCA_900100645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/645/GCA_900100645.1_Agro2	-	-
Streptococcus parasanguinis	1318	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.17891	41.6	-	JVVK01	120	2128	1997	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197258	GCA_001070445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/445/GCA_001070445.1_ASM107044v1	26230489	1287_SPAR
Fusobacterium necrophorum subsp. funduliforme	143387	PRJNA315619	315619	Fusobacteria	Fusobacteriia	2.1001	35.1	-	LVEU01	37	2015	1916	3/25/16	4/5/17	Contig	Aarhus University	SAMN04569320	GCA_001597385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/385/GCA_001597385.1_ASM159738v1	-	LS_1291
Citrobacter freundii	546	PRJNA252011	252011	Proteobacteria	Gammaproteobacteria	5.2853	51.5	-	JRTH01	55	5272	4989	10/26/15	4/4/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872790	GCA_001412795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/795/GCA_001412795.1_ASM141279v1	25501822	RU2 BHI14
Leptospira santarosai str. ST188	1218593	PRJNA177125	177125	Spirochaetes	Spirochaetia	4.0627	41.8	-	AOHA02	88	4070	3706	1/18/13	4/1/17	Contig	J. Craig Venter Institute	SAMN02436570	GCA_000332435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/435/GCA_000332435.2_gls454005v02	-	ST188
Streptococcus gallolyticus	315405	PRJEB17024	351206	Terrabacteria group	Firmicutes	2.17862	37.5	-	FOGM01	33	2200	2043	10/29/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487840	GCA_900111215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/215/GCA_900111215.1_IMG-taxon_2606217755_annotated_assembly	-	VTM2R47
Pantoea ananatis	553	PRJNA278207	278207	Proteobacteria	Gammaproteobacteria	4.73486	53.5	-	LDQX01	54	4526	4311	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401372	GCA_001475715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/715/GCA_001475715.1_ASM147571v1	26793183	NS296
Streptococcus anginosus	1328	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.8395	38.8	-	JURJ01	50	1823	1731	7/10/15	4/3/17	Contig	University of Washington	SAMN03198039	GCA_001074525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/525/GCA_001074525.1_ASM107452v1	26230489	83_SANG
Staphylococcus lugdunensis	28035	PRJNA272117	272117	Terrabacteria group	Firmicutes	2.50183	33.7	-	LRQI01	41	2368	2293	2/2/16	4/4/17	Scaffold	The Genome Institute at Washington University	SAMN03948580	GCA_001546615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/615/GCA_001546615.1_ASM154661v1	-	MJR7738
Riemerella anatipestifer	34085	PRJNA309004	309004	FCB group	Bacteroidetes/Chlorobi group	2.09889	34.9	-	LUDM01	28	1963	1901	6/20/16	4/5/17	Contig	Sichuan Agricultural University	SAMN04419310	GCA_001670685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/670/685/GCA_001670685.1_RCAD0150	-	RCAD0150
Acinetobacter pittii	48296	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	4.09838	38.7	-	BBTR01	55	4016	3827	2/17/15	4/3/17	Contig	National Institute of Technology and Evaluation	SAMD00020352	GCA_000931915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/915/GCA_000931915.1_ASM93191v1	-	NBRC 110508
Xanthomonas euvesicatoria	456327	PRJNA267081	267081	Proteobacteria	Gammaproteobacteria	5.39693	64.5	-	JTEH01	375	5034	4414	7/21/16	4/5/17	Contig	Institut de Recherche pour le Developpement	SAMN03177540	GCA_001691315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/315/GCA_001691315.1_XEU_LMG667_E1.0	-	LMG 667
Pseudomonas amygdali pv. ulmi	251720	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	6.24416	58	-	LJRQ01	455	5909	5409	10/20/15	4/4/17	Scaffold	University of Toronto	SAMN03976251	GCA_001401165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/165/GCA_001401165.1_PumICMP3962	-	ICMP3962
Brucella sp. NF 2653	693748	PRJNA41859	41859	Proteobacteria	Alphaproteobacteria	3.11028	57.2	-	ADFB01	113	3125	2826	9/3/10	4/17/17	Contig	"Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA"	SAMN02472085	GCA_000177155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/155/GCA_000177155.1_ASM17715v1	-	NF 2653
Enterobacter asburiae	61645	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.7718	55.7	-	LEDA01	67	4702	4475	6/9/15	4/3/17	Contig	JCVI	SAMN03732731	GCA_001022955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/955/GCA_001022955.1_ASM102295v1	-	GN03140
Lactobacillus curieae	1138822	PRJNA266911	266911	Terrabacteria group	Firmicutes	2.09586	39.8	chromosome:NZ_CP018906.1/CP018906.1	-	1	2040	1934	3/3/17	3/6/17	Complete Genome	East China University of Science and Technology	SAMN03175170	GCA_000785105.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/105/GCA_000785105.2_ASM78510v2	26021929	CCTCC M 2011381
Pediococcus acidilactici	1254	PRJNA321943	321943	Terrabacteria group	Firmicutes	2.07665	42.1	-	LYUJ01	22	2075	1935	6/21/16	4/5/17	Contig	Microbial Institue for Fermentation Industry	SAMN05162513	GCA_001672605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/605/GCA_001672605.1_ASM167260v1	-	SRCM100320
Vibrio alginolyticus	663	PRJNA272352	272352	Proteobacteria	Gammaproteobacteria	5.19063	44.6	-	JXIN01	105	4820	4678	2/9/15	4/3/17	Contig	University of Malaya	SAMN03280973	GCA_000834155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/155/GCA_000834155.1_ASM83415v1	-	BSW8
Pseudoalteromonas sp. S8-38	1333519	PRJNA202437	202437	Proteobacteria	Gammaproteobacteria	4.98398	39.2	-	AUTS01	80	4537	4285	11/20/13	4/9/17	Contig	University of Florence	SAMN02471753	GCA_000497895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/895/GCA_000497895.1_s8-38	-	S8-38
Acinetobacter calcoaceticus DSM 30006 = CIP 81.8	981331	PRJNA62423	62423	Proteobacteria	Gammaproteobacteria	3.88842	38.6	-	AIEC01	362	-	-	2/21/12	1/8/14	Contig	University of Birmingham	SAMN02471589	GCA_000248175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/175/GCA_000248175.2_ASM24817v2	23259572	DSM 30006
Pseudomonas savastanoi pv. phaseolicola	319	PRJNA287071	287071	Proteobacteria	Gammaproteobacteria	6.15461	57.7	-	LGKY01	96	5729	5211	9/18/15	4/4/17	Scaffold	University of Toronto	SAMN03837771	GCA_001294025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/025/GCA_001294025.1_Pph1302A	-	1302A
Pseudomonas syringae pv. tomato NCPPB 1108	673265	PRJNA40345	40345	Proteobacteria	Gammaproteobacteria	6.08205	58.7	-	ADGA01	304	5743	5456	2/4/10	5/19/17	Contig	Virginia Tech	SAMN02472091	GCA_000177495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/495/GCA_000177495.1_ASM17749v1	-	NCPPB 1108
Xanthomonas fuscans subsp. fuscans	366649	PRJNA254368	254368	Proteobacteria	Gammaproteobacteria	4.85701	64.9	-	JPYF01	1314	4467	3628	10/21/15	4/4/17	Contig	Institute for Agricultural and Fisheries Research (ILVO)	SAMN02903172	GCA_001401605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/605/GCA_001401605.1_Xff_LMG826	-	LMG 826
Achromobacter xylosoxidans	85698	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	6.68778	67.6	-	LOSD01	8	6138	5790	12/21/15	4/5/17	Contig	US Food and Drug Administration 	SAMN03996276	GCA_001471535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/535/GCA_001471535.1_ASM147153v1	-	FDAARGOS_133
Streptococcus oralis SK255	1005704	PRJNA65581	65581	Terrabacteria group	Firmicutes	2.00518	40.9	-	AFNM01	63	2049	1756	5/27/11	3/30/17	Contig	J. Craig Venter Institute	SAMN00621703	GCA_000215365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/365/GCA_000215365.2_ASM21536v2	-	SK255
Streptomyces griseus	1911	PRJNA237995	237995	Terrabacteria group	Actinobacteria	7.62822	71.6	-	JYBE01	176	6890	6507	2/24/15	3/11/17	Scaffold	Gyongsang National University	SAMN03320103	GCA_000932225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/932/225/GCA_000932225.1_ASM93222v1	-	S4-7
Acinetobacter nosocomialis	106654	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	4.03908	38.6	-	BBTW01	72	3873	3691	2/20/15	4/3/17	Contig	National Institute of Technology and Evaluation	SAMD00020346	GCA_000949715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/715/GCA_000949715.1_ASM94971v1	-	NBRC 110502
Klebsiella variicola	244366	PRJNA238043	238043	Proteobacteria	Gammaproteobacteria	5.54357	57.3435	plasmid pBZ19:NZ_JDWA01000031.1/JDWA01000031.1	JDWA01	208	5601	5022	8/21/14	4/10/17	Contig	Instituto Oswaldo Cruz	SAMN02640656	GCA_000742915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/915/GCA_000742915.1_KvarBZ19	25135672	BZ19
Bacillus atrophaeus BACI051-N	876283	PRJNA51595	51595	Terrabacteria group	Firmicutes	4.12971	43.1	-	AEFY01	78	4233	4000	4/19/11	6/15/17	Contig	Transformational Medical Technologies Program	SAMN02472056	GCA_000204905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/905/GCA_000204905.2_ASM20490v2	21464989	BACI051-N
Rhodococcus hoagii	43767	PRJNA316970	316970	Terrabacteria group	Actinobacteria	5.60809	68.6	-	LWTR01	840	5192	4879	4/17/17	6/6/17	Contig	The University of Edinburgh	SAMN04874680	GCA_002094315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/315/GCA_002094315.1_ASM209431v1	27638249	PAM2276
Staphylococcus warneri	1292	PRJNA304162	304162	Terrabacteria group	Firmicutes	2.44128	32.497	plasmid unnamed 1:NZ_CM007783.1/CM007783.1; plasmid unnamed 2:NZ_CM007784.1/CM007784.1	LNVI01	44	2383	2273	3/14/17	3/17/17	Contig	Karolinska Institutet	SAMN04296377	GCA_002026425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/425/GCA_002026425.1_ASM202642v1	-	MMP1
Staphylococcus capitis	29388	PRJEB8618	278837	Terrabacteria group	Firmicutes	2.54012	32.8	-	CTEO01	39	2459	2356	3/26/15	4/3/17	Contig	Department of Biosecurity PCL3	SAMEA3271080	GCA_001220005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/005/GCA_001220005.1_CR05	-	CR05
Staphylococcus hominis	1290	PRJNA316783	316783	Terrabacteria group	Firmicutes	2.20872	31.4	-	LWJO01	102	2186	2080	11/10/16	4/5/17	Contig	CSIR-Institute of Microbial Technology	SAMN04590064	GCA_001876445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/445/GCA_001876445.1_ASM187644v1	-	RE2.7
Lactobacillus paracasei subsp. paracasei Lpp228	1256205	PRJNA178432	178432	Terrabacteria group	Firmicutes	2.93604	46.2	-	ANKA01	188	3139	2748	6/11/13	4/1/17	Contig	Danone Research	SAMN02469720	GCA_000409995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/995/GCA_000409995.1_ASM40999v1	23894338	Lpp228
Gardnerella vaginalis JCP7672	1261060	PRJNA181315	181315	Terrabacteria group	Actinobacteria	1.60353	41.2	-	ATJP01	139	1358	1194	6/25/13	4/1/17	Scaffold	Washington University	SAMN02436831	GCA_000414645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/645/GCA_000414645.1_ASM41464v1	-	JCP7672
Rothia mucilaginosa	43675	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.27171	61.9	-	JVFS01	43	1831	1722	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197666	GCA_001065135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/135/GCA_001065135.1_ASM106513v1	26230489	473_RMUC
Aggregatibacter actinomycetemcomitans serotype d str. SA2200	1434258	PRJNA230857	230857	Proteobacteria	Gammaproteobacteria	2.06496	44.2	-	AZTY01	436	2246	1884	3/23/16	4/5/17	Contig	"Bumgarner laboratory, Department of Microbiology, University of Washington"	SAMN04573005	GCA_001596325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/325/GCA_001596325.1_SA2200v1.0	-	SA2200
Lactobacillus crispatus	47770	PRJNA312502	312502	Terrabacteria group	Firmicutes	2.04845	36.8	-	LSVK01	7	2031	1863	2/24/16	4/4/17	Contig	University of Illinois	SAMN04498476	GCA_001567095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/095/GCA_001567095.1_ASM156709v1	27081134	JCM 5810
Brachyspira hyodysenteriae	159	PRJNA272555	272555	Spirochaetes	Spirochaetia	3.10808	27	-	JXNQ01	209	2761	2608	5/26/15	4/3/17	Scaffold	Murdoch University	SAMN03286867	GCA_001013115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/013/115/GCA_001013115.1_ASM101311v1	26098837	ST265
Mycobacterium kansasii	1768	PRJNA368836	368836	Terrabacteria group	Actinobacteria	6.62904	66.1	-	MVBM01	21	6116	3295	2/17/17	4/10/17	Contig	"Institute for Genome Sciences, University of Maryland, Baltimore"	SAMN06273889	GCA_002003625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/003/625/GCA_002003625.1_ASM200362v1	-	Nov-13
Pectobacterium carotovorum subsp. actinidiae	1507808	PRJNA252053	252053	Proteobacteria	Gammaproteobacteria	4.92217	51.5	-	JRMH01	3	4357	4151	12/18/14	4/2/17	Contig	National Academy of Agricultural Science	SAMN02849387	GCA_000803315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/315/GCA_000803315.1_ASM80331v1	-	KKH3
Streptococcus equinus	1335	PRJEB15920	348255	Terrabacteria group	Firmicutes	1.82598	37.3	-	FNKC01	8	1798	1741	10/20/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488495	GCA_900099885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/885/GCA_900099885.1_IMG-taxon_2623621021_annotated_assembly	-	C277
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.75689	47.6	-	MECH01	79	3480	3301	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320419	GCA_001882895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/895/GCA_001882895.1_ASM188289v1	-	07/3342-1k
Escherichia albertii	208962	PRJDB3047	301492	Proteobacteria	Gammaproteobacteria	4.77675	49.4	-	BBVN01	113	4878	4511	11/6/15	2/25/17	Scaffold	University of Miyazaki	SAMD00026648	GCA_001514745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/745/GCA_001514745.1_ASM151474v1	26537224	NIAH_Bird_25
Lactobacillus sakei	1599	PRJNA343164	343164	Terrabacteria group	Firmicutes	1.95344	40.9	-	MKDE01	28	1977	1876	2/1/17	4/10/17	Scaffold	ETH Zurich	SAMN05717727	GCA_001981825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/825/GCA_001981825.1_ASM198182v1	-	RI-404
Lactobacillus johnsonii	33959	PRJNA384810	384810	Terrabacteria group	Firmicutes	1.96339	34.4	-	NGOE01	96	1863	1740	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848426	GCA_002253165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/165/GCA_002253165.1_ASM225316v1	-	117q
Rhodococcus erythropolis	1833	PRJNA268657	268657	Terrabacteria group	Actinobacteria	6.81286	62.2	-	JWJL01	533	6605	3757	1/30/15	1/30/15	Contig	Universidad de Santiago de Chile	SAMN03222825	GCA_000830355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/355/GCA_000830355.1_ASM83035v1	-	S-43
Clostridium butyricum	1492	PRJNA292365	292365	Terrabacteria group	Firmicutes	4.87949	28.6	-	LIDW01	434	4474	3105	10/23/15	10/23/15	Contig	Saurashtra University	SAMN03975647	GCA_001411625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/625/GCA_001411625.1_ASM141162v1	-	SU1
Flavobacterium psychrophilum	96345	PRJNA272759	272759	FCB group	Bacteroidetes/Chlorobi group	2.87781	32.4	-	LRTL01	24	2679	2553	5/10/16	4/5/17	Contig	University of Copenhagen	SAMN02941919	GCA_000971785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/785/GCA_000971785.2_ASM97178v2	-	4
Lysinibacillus sphaericus	1421	PRJNA348753	348753	Terrabacteria group	Firmicutes	4.63582	37.2	-	DGFP01	47	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453099	GCA_002391755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/755/GCA_002391755.1_ASM239175v1	28894102	-
Campylobacter concisus	199	PRJNA280467	280467	Proteobacteria	delta/epsilon subdivisions	2.02757	39.4	-	NDYQ01	44	2035	1926	6/4/17	6/6/17	Contig	Institute of Environmental Science and Research (ESR)	SAMN03457019	GCA_002165825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/825/GCA_002165825.1_ASM216582v1	-	Lasto127.99
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.91594	67.1	-	LOTJ01	80	7157	6802	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449145	GCA_001522415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/415/GCA_001522415.1_ASM152241v1	-	RF23-BP90
Propionibacterium freudenreichii	1744	PRJEB6435	270199	Terrabacteria group	Actinobacteria	2.56734	67.4	-	CCYU01	57	2282	2159	12/11/14	4/4/17	Scaffold	INRA STLO	SAMEA2822495	GCA_900000065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/000/065/GCA_900000065.1_CIRM-BIA127	-	ITG P18
Aeromonas hydrophila 116	1268075	PRJNA183196	183196	Proteobacteria	Gammaproteobacteria	4.67704	62	-	ANPN01	45	4318	4159	4/2/13	5/18/17	Contig	University of Malaya	SAMN02471861	GCA_000350405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/405/GCA_000350405.1_de_novo_assembly	-	116
Pseudomonas stutzeri XLDN-R	1200345	PRJNA168597	168597	Proteobacteria	Gammaproteobacteria	4.69542	63.9	-	AKYE01	167	4415	4234	7/20/12	5/19/17	Contig	"State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University"	SAMN02470940	GCA_000280555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/555/GCA_000280555.1_ASM28055v1	23012282	XLDN-R
Yersinia intermedia	631	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	5.09138	47.7	-	NHOI01	69	4770	4543	6/9/17	6/12/17	Scaffold	FDA/CFSAN	SAMN06330407	GCA_002188935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/935/GCA_002188935.1_ASM218893v1	-	CFSAN060536
Paenibacillus polymyxa	1406	PRJNA245788	245788	Terrabacteria group	Firmicutes	5.77535	45.5	-	JMIQ01	84	5072	4804	6/27/14	4/2/17	Contig	CAS Key Laboratory of Microbial Physiological and Metabolic Engineering	SAMN02739891	GCA_000714835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/835/GCA_000714835.1_DSM365V1	-	DSM 365
Bacillus coagulans	1398	PRJNA385743	385743	Terrabacteria group	Firmicutes	3.4563	46.4	-	NFZN01	150	3513	2864	8/23/17	8/23/17	Contig	Agharkar Research Institute	SAMN06909301	GCA_002266595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/595/GCA_002266595.1_ASM226659v1	-	HS243
Vibrio sp. J2-15	1507976	PRJEB5893	284699	Proteobacteria	Gammaproteobacteria	5.56248	44.5	-	CCKG01	73	4926	4808	5/20/15	4/10/17	Scaffold	STATION BIOLOGIQUE DE ROSCOFF	SAMEA2594002	GCA_001244175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/175/GCA_001244175.1_VRSK15v1_PRJEB5893	-	J2-15
Staphylococcus saprophyticus subsp. saprophyticus	147452	PRJEB13291	317811	Terrabacteria group	Firmicutes	2.61065	33.2	-	FKIN01	21	2540	2347	4/8/16	4/5/17	Contig	URMITE	SAMEA3918186	GCA_900079075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/075/GCA_900079075.1_PRJEB13291	-	G764
Streptococcus sanguinis SK1056	888820	PRJNA53181	53181	Terrabacteria group	Firmicutes	2.37669	43.1	-	AFFL01	3	2365	2237	5/9/11	6/15/17	Scaffold	Baylor College of Medicine	SAMN00253325	GCA_000212835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/212/835/GCA_000212835.1_ASM21283v1	-	SK1056
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.22203	36.7	-	LPRK01	2	2338	2172	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305145	GCA_001560115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/115/GCA_001560115.1_GG12_C01_11	-	GG12-C01-11
Bacillus weihenstephanensis	86662	PRJNA318336	318336	Terrabacteria group	Firmicutes	5.58918	35.3	-	LXLQ01	150	5848	5431	10/28/16	4/5/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04819582	GCA_001855755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/755/GCA_001855755.1_ASM185575v1	-	GOE5
Bifidobacterium breve 2L	1385943	PRJNA214961	214961	Terrabacteria group	Actinobacteria	2.24072	58.9	-	AWUG01	6	1976	1761	2/13/14	4/10/17	Contig	University of Parma	SAMN02951890	GCA_000568895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/895/GCA_000568895.1_Mira_de-novo_assembly	24581150	2L
Streptococcus pneumoniae	1313	PRJNA354664	354664	Terrabacteria group	Firmicutes	2.09215	39.8	chromosome:NZ_CP018347.1/CP018347.1	-	1	2272	2019	12/13/16	3/14/17	Complete Genome	Southwest Medical University	SAMN06109026	GCA_001902455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/455/GCA_001902455.1_ASM190245v1	-	SWU02
Moraxella catarrhalis	480	PRJNA297370	297370	Proteobacteria	Gammaproteobacteria	1.95395	41.7	-	LXHT01	26	1853	1710	6/3/16	4/5/17	Contig	Drexel University College of Medicine	SAMN04122790	GCA_001656095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/095/GCA_001656095.1_ASM165609v1	26912404	F18
Bacillus clausii	79880	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.29792	44.6	-	NPBW01	90	4266	4136	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372697	GCA_002272615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/615/GCA_002272615.1_assembly-7529_v1	-	7529
Lactobacillus salivarius	1624	PRJNA377666	377666	Terrabacteria group	Firmicutes	1.88402	32.7	-	NFLK01	50	1857	1721	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473601	GCA_002160855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/855/GCA_002160855.1_ASM216085v1	-	An128
Clostridium beijerinckii	1520	PRJNA327682	327682	Terrabacteria group	Firmicutes	5.8809	29.7	-	MBAF01	105	5183	4905	7/14/16	4/5/17	Scaffold	National University of Singapore	SAMN05355371	GCA_001685175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/175/GCA_001685175.1_ASM168517v1	-	BGS1
Klebsiella oxytoca 09-7231	883116	PRJNA52135	52135	Proteobacteria	Gammaproteobacteria	6.1736	54.8	-	AGDH01	5	5884	5636	7/15/15	2/25/17	Scaffold	Broad Institute	SAMN00254032	GCA_001078175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/175/GCA_001078175.1_Kleb_oxyt_09-7231_V1	-	Sep-31
Cronobacter sakazakii	28141	PRJNA251813	251813	Proteobacteria	Gammaproteobacteria	4.55523	56.8	-	JOLP01	101	4473	4201	10/9/15	4/4/17	Scaffold	"Nottingham Trent University, UK"	SAMN02840807	GCA_001309185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/185/GCA_001309185.1_ASM130918v1	26438044	715
Lactobacillus acidipiscis	89059	PRJEB17511	352504	Terrabacteria group	Firmicutes	2.60742	39.8	chromosome I:NZ_LT630287.1/LT630287.1	-	1	2455	2199	11/7/16	3/18/17	Complete Genome	Agricultural University of Athens	SAMEA4527927	GCA_900116935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/935/GCA_900116935.1_Chromosome	-	ACA-DC 1533
Proteus mirabilis	584	PRJNA395387	395387	Proteobacteria	Gammaproteobacteria	4.00328	38.7	-	NOWA01	87	3830	3619	8/22/17	8/24/17	Scaffold	Washington University	SAMN07376756	GCA_002265355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/355/GCA_002265355.1_ASM226535v1	-	PM187
Mycoplasma bovis	28903	PRJNA306895	306895	Terrabacteria group	Tenericutes	0.944405	29.3	-	LQDJ01	73	818	731	1/4/17	4/6/17	Contig	"University of California, Davis"	SAMN04366505	GCA_001930165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/165/GCA_001930165.1_ASM193016v1	-	2297MB
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.49383	32.6	-	CUGT01	102	2490	2346	3/31/15	3/26/17	Contig	SC	SAMEA1035135	GCA_001225245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/245/GCA_001225245.1_7068_7_5	-	6660
Cutibacterium acnes	1747	PRJNA292486	292486	Terrabacteria group	Actinobacteria	2.47002	60.1	chromosome:NZ_CP012353.1/CP012353.1	-	1	2485	2357	12/18/15	4/4/17	Chromosome	None	SAMN03982937	GCA_001469635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/635/GCA_001469635.1_ASM146963v1	26857276	PA_12_1_R1
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.82647	67	-	LOWS01	117	6262	5933	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449240	GCA_001524045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/045/GCA_001524045.1_ASM152404v1	-	FL-5-2-10-S1-D0
Burkholderia sp. AD24	1528693	PRJNA320371	320371	Proteobacteria	Betaproteobacteria	8.2389	62.7155	chromosome I:CP016434.1; chromosome II:CP016435.1; plasmid unnamed1:CP016436.1	-	3	7356	7239	7/17/17	7/17/17	Chromosome	Netherlands Institute of Ecology	SAMN04933939	GCA_002220305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/305/GCA_002220305.1_ASM222030v1	-	AD24
Streptococcus pneumoniae	1313	PRJNA244310	244310	Terrabacteria group	Firmicutes	2.28777	39.8	chromosome:NZ_CP007593.1/CP007593.1	-	1	2445	2084	1/9/15	3/15/17	Complete Genome	University of Bern	SAMN02725063	GCA_000817005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/005/GCA_000817005.1_ASM81700v1	25480686	NT_110_58
Mycoplasma gallisepticum	2096	PRJNA325637	325637	Terrabacteria group	Tenericutes	0.958538	31.4	-	MAFU01	71	805	677	6/24/16	4/10/17	Contig	University of Georgia	SAMN05245157	GCA_001676575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/575/GCA_001676575.1_ASM167657v1	-	K2966
Lactobacillus brevis	1580	PRJDB3257	265837	Terrabacteria group	Firmicutes	2.60195	45.4	-	BBOW01	110	2683	2483	11/12/14	4/2/17	Contig	World Institute of Kimchi	SAMD00021033	GCA_000784455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/455/GCA_000784455.1_ASM78445v1	-	WK12
Mannheimia haemolytica serotype 6 str. H23	1261125	PRJNA181191	181191	Proteobacteria	Gammaproteobacteria	2.66188	40.8	-	AOGP01	68	2696	2536	2/22/13	4/1/17	Contig	Agriculture and Agri-Food Canada	SAMN02393733	GCA_000341635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/635/GCA_000341635.1_MH23v1	23558528	H23
Streptococcus pneumoniae gamPNI0373	697283	PRJNA42247	42247	Terrabacteria group	Firmicutes	2.06415	39.8	chromosome:NC_018630.1/CP001845.1	-	1	2277	2026	9/21/12	3/9/17	Complete Genome	WashU	SAMN02299431	GCA_000299015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/015/GCA_000299015.1_ASM29901v1	-	gamPNI0373
Streptococcus pneumoniae SPNA45	869309	PRJNA50805	50805	Terrabacteria group	Firmicutes	2.12993	39.8	chromosome:NC_018594.1/HE983624.1	-	1	2394	2069	9/7/12	3/8/17	Complete Genome	Wellcome Trust Sanger Institute	SAMEA3138306	GCA_000180515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/180/515/GCA_000180515.2_ASM18051v2	-	A45
Bartonella henselae	38323	PRJNA295147	295147	Proteobacteria	Alphaproteobacteria	1.83781	37.9	-	LOAC01	53	1671	1453	1/4/17	4/10/17	Contig	Anses UMR BIPAR	SAMN04286624	GCA_001932175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/175/GCA_001932175.1_ASM193217v1	-	A121
Lactobacillus acidophilus	1579	PRJNA218564	218564	Terrabacteria group	Firmicutes	1.99232	34.7	-	MNPO01	7	1981	1856	11/7/16	4/5/17	Scaffold	"key lab of dairy science, ministry of education, northeast agriculture university"	SAMN05949236	GCA_001868765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/765/GCA_001868765.1_ASM186876v1	-	KLDS 1.0901
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.15854	39.9	-	FPMD01	3	1055	957	5/10/17	5/24/17	Contig	WTSI	SAMEA1094368	GCA_900118815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/815/GCA_900118815.1_7067_6_43	-	C13_98
Leuconostoc mesenteroides subsp. cremoris	33965	PRJNA280520	280520	Terrabacteria group	Firmicutes	1.90636	37.8	-	LAYV01	65	1970	1713	7/21/15	4/3/17	Contig	University of Verona	SAMN03463677	GCA_001184265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/265/GCA_001184265.1_ASM118426v1	-	LbT16
Anaplasma phagocytophilum str. CR1007	1359156	PRJNA212464	212464	Proteobacteria	Alphaproteobacteria	1.50202	41.7	-	LASO01	4	1213	1040	4/2/15	4/3/17	Contig	IGS	SAMN02585094	GCA_000968455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/455/GCA_000968455.1_ASM96845v1	-	CR1007
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.07265	41.6	-	JJQE01	164	3511	3299	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708967	GCA_000979125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/125/GCA_000979125.1_gtlEnvA5udCFS	25756680	1.F.M.0.5
Streptococcus pneumoniae OXC141	869215	PRJNA50733	50733	Terrabacteria group	Firmicutes	2.03687	39.8	chromosome:NC_017592.1/FQ312027.1	-	1	2246	2005	7/29/10	9/18/17	Complete Genome	The Wellcome Trust Sanger Institute	SAMEA3138387	GCA_000210955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/955/GCA_000210955.1_ASM21095v1	"2,103,447,424,130,500"	OXC141
Lactobacillus gasseri	1596	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.09551	34.8	-	JVEV01	47	2021	1877	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197689	GCA_001063505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/505/GCA_001063505.1_ASM106350v1	26230489	497_LGAS
Yersinia enterocolitica	630	PRJNA243537	243537	Proteobacteria	Gammaproteobacteria	4.69952	46.9	-	JPDW01	3	4430	4069	9/16/14	3/24/17	Scaffold	Los Alamos National Laboratory	SAMN02887277	GCA_000754985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/985/GCA_000754985.1_YEE	25342679	YEE
Streptococcus pneumoniae SPN034183	869304	PRJNA50795	50795	Terrabacteria group	Firmicutes	2.03725	39.8	chromosome:NC_021028.1/FQ312043.1	-	1	2244	1986	7/29/10	9/18/17	Complete Genome	Wellcome Trust Sanger Institute	SAMEA3138390	GCA_000211015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/211/015/GCA_000211015.1_ASM21101v1	"2,103,447,424,130,500"	SNP034183
Streptococcus gordonii	1302	PRJNA280679	280679	Terrabacteria group	Firmicutes	2.30798	40.3	-	LAYG01	20	2257	2145	3/11/16	4/5/17	Contig	University of Malaya	SAMN03480688	GCA_001588985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/985/GCA_001588985.1_ASM158898v1	-	MB666
[Haemophilus] ducreyi	730	PRJNA270894	270894	Proteobacteria	Gammaproteobacteria	1.6516	38.2	chromosome:CP011219.1	-	1	1610	1452	6/30/15	7/23/15	Chromosome	Indiana University School of Medicine	SAMN03271818	GCA_001043195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/195/GCA_001043195.1_ASM104319v1	-	CLU2
Corynebacterium diphtheriae bv. intermedius str. NCTC 5011	1166015	PRJNA120127	120127	Terrabacteria group	Actinobacteria	2.38036	53.6	-	AJVH01	34	2309	2109	5/21/12	3/30/17	Contig	"Strathclyde Institute of Pharmacy and Biomedical Science, University of Strathclyde"	SAMN02471953	GCA_000263415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/415/GCA_000263415.1_ASM26341v1	22887653	NCTC 5011
Mesorhizobium loti	381	PRJNA399611	399611	Proteobacteria	Alphaproteobacteria	6.45835	62.9	-	NSFO01	34	6320	6027	9/12/17	9/14/17	Contig	Curtin University	SAMN07540856	GCA_002294825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/825/GCA_002294825.1_ASM229482v1	-	R7ANSxCC1192
Streptococcus pneumoniae SPN994038	869306	PRJNA50799	50799	Terrabacteria group	Firmicutes	2.02624	39.8	chromosome:NC_021026.1/FQ312041.2	-	1	2232	1990	7/29/10	9/18/17	Complete Genome	Wellcome Trust Sanger Institute	SAMEA3138391	GCA_000211035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/211/035/GCA_000211035.2_ASM21103v2	"2,103,447,424,130,500"	SNP994038
Bordetella bronchiseptica 7E71	1331201	PRJNA202113	202113	Proteobacteria	Betaproteobacteria	5.16355	68.2	-	JGWL01	109	4941	4759	5/1/14	4/2/17	Contig	JCVI	SAMN02263899	GCA_000662155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/155/GCA_000662155.1_gbb05v01	25908122	7.00E+71
Bacteroides uniformis	820	PRJNA321218	321218	FCB group	Bacteroidetes/Chlorobi group	4.50659	45.8	-	MNQU01	343	3860	3254	12/23/16	12/23/16	Scaffold	None	SAMN05717226	GCA_001915595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/595/GCA_001915595.1_ASM191559v1	27819664	-
Streptococcus pneumoniae SPN994039	869307	PRJNA50801	50801	Terrabacteria group	Firmicutes	2.0265	39.8	chromosome:NC_021005.1/FQ312044.2	-	1	2233	1992	7/29/10	9/18/17	Complete Genome	Wellcome Trust Sanger Institute	SAMEA3138392	GCA_000211055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/211/055/GCA_000211055.2_ASM21105v2	"2,103,447,424,130,500"	SNP994039
Clostridium sporogenes	1509	PRJNA278445	278445	Terrabacteria group	Firmicutes	3.9596	28.1	-	LJSZ01	79	3808	3489	11/17/15	4/10/17	Contig	Illinois Institute of Technology	SAMN03418522	GCA_001444665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/665/GCA_001444665.1_ASM144466v1	26519392	PA 3679
Bacillus megaterium	1404	PRJEB17314	351516	Terrabacteria group	Firmicutes	5.88643	37.4	-	FOPA01	81	6065	5781	10/31/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487776	GCA_900113355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/355/GCA_900113355.1_IMG-taxon_2623620555_annotated_assembly	-	ATCC 14581
Enterococcus casseliflavus	37734	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.60239	42.7	-	DBUG01	29	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06450798	GCA_002307895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/895/GCA_002307895.1_ASM230789v1	28894102	-
Streptococcus pneumoniae TCH8431/19A	525381	PRJNA34659	34659	Terrabacteria group	Firmicutes	2.08877	39.8	chromosome:NC_014251.1/CP001993.1	-	1	2277	2031	6/14/10	3/2/17	Complete Genome	Baylor College of Medicine	SAMN00002223	GCA_000196595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/595/GCA_000196595.1_ASM19659v1	-	TCH8431/19A
Vibrio splendidus ZS-139	617140	PRJNA167011	167011	Proteobacteria	Gammaproteobacteria	5.28988	43.6	-	AJZE02	110	4596	4486	6/25/12	4/5/17	Scaffold	Broad Institute	SAMN02470467	GCA_000272225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/225/GCA_000272225.2_ASM27222v2	22955834	ZS-139
Acetobacter pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471	940265	PRJDA65547	65547	Proteobacteria	Alphaproteobacteria	2.8882	53.1	-	BACG01	306	2732	2573	1/6/12	7/12/17	Contig	Yamaguchi University	SAMD00036553	GCA_000241625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/625/GCA_000241625.2_ASM24162v2	22016572	IFO 3191
Lactobacillus rhamnosus ATCC 21052	1002365	PRJNA65127	65127	Terrabacteria group	Firmicutes	2.87703	46.7	-	AFZY01	42	2906	2723	11/18/11	6/15/17	Scaffold	Washington University Genome Center	SAMN02299451	GCA_000235865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/865/GCA_000235865.1_ASM23586v1	-	ATCC 21052
Streptococcus pneumoniae Taiwan19F-14	487213	PRJNA28037	28037	Terrabacteria group	Firmicutes	2.11215	39.8	chromosome:NC_012469.1/CP000921.1	-	1	2306	2052	3/27/09	3/15/17	Complete Genome	J. Craig Venter Institute	SAMN02603443	GCA_000019025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/025/GCA_000019025.1_ASM1902v1	-	Taiwan19F-14
Haemophilus parasuis HPS11	1450515	PRJNA235356	235356	Proteobacteria	Gammaproteobacteria	2.11218	39.9	-	JDSP01	305	2062	1832	5/12/14	4/2/17	Contig	"Newport Laboratories, A Sanofi company"	SAMN02769536	GCA_000688835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/835/GCA_000688835.1_HparHPS11v1.0	25189591	HPS11
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12742	41.2	-	CWBL01	74	2046	1880	6/23/15	3/26/17	Contig	SC	SAMEA1032753	GCA_001175085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/085/GCA_001175085.1_6903_4_70	-	EQUI0119
Micrococcus luteus	1270	PRJNA327388	327388	Terrabacteria group	Actinobacteria	2.50109	73	-	MAYP01	8	2317	2205	7/21/16	4/5/17	Scaffold	Oklahoma State University	SAMN05332132	GCA_001691605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/605/GCA_001691605.1_ASM169160v1	-	O'kane
Alteromonas macleodii	28108	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	2.64033	44	-	LUNM01	514	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534562	GCA_001626335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/335/GCA_001626335.1_ASM162633v1	27377622	-
Bifidobacterium bifidum	1681	PRJNA263318	263318	Terrabacteria group	Actinobacteria	2.17604	62.9	-	JSEB01	15	1867	1685	6/5/15	4/3/17	Contig	University of Parma	SAMN03097405	GCA_001020325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/325/GCA_001020325.1_Bbif10v4	25523018	LMG 13200
Yersinia frederiksenii	29484	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	5.11801	47.7	-	CQEP01	39	4770	4577	3/23/15	4/4/17	Scaffold	SC	SAMEA859869	GCA_001157485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/485/GCA_001157485.1_4821_6_3	-	28/85
Bacillus mycoides	1405	PRJNA356814	356814	Terrabacteria group	Firmicutes	5.94817	35.1	-	MRWV01	88	6404	5926	5/5/17	6/16/17	Contig	University of Groningen	SAMN06127748	GCA_002118175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/118/175/GCA_002118175.1_ASM211817v1	-	S2E19
Comamonas testosteroni	285	PRJNA218487	218487	Proteobacteria	Betaproteobacteria	5.06027	61.6	-	AWTQ01	67	4633	4472	10/1/14	4/2/17	Contig	Huazhong Agricultural University	SAMN03085426	GCA_000761415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/415/GCA_000761415.1_CD4v1	25766446	D4
Stenotrophomonas maltophilia RR-10	1095923	PRJNA74289	74289	Proteobacteria	Gammaproteobacteria	4.66056	66.3	-	AGRB01	158	4311	4055	12/9/11	8/13/15	Contig	Zhejiang University 	SAMN02471024	GCA_000237025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/025/GCA_000237025.2_ASM23702v2	22328769	RR-10
Cyanothece sp. PCC 8802	395962	PRJNA28339	28339	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.80335	39.7978	chromosome:NC_013161.1/CP001701.1; plasmid pP880201:NC_013160.1/CP001702.1; plasmid pP880202:NC_013163.1/CP001703.1; plasmid pP880203:NC_013167.1/CP001704.1; plasmid pP880204:NC_013168.1/CP001705.1	-	5	4540	4371	8/26/09	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000634	GCA_000024045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/045/GCA_000024045.1_ASM2404v1	-	PCC 8802
Streptococcus pseudopneumoniae IS7493	1054460	PRJNA69547	69547	Terrabacteria group	Firmicutes	2.19546	39.7968	chromosome:NC_015875.1/CP002925.1; plasmid pDRPIS7493:NC_015876.1/CP002926.1	-	2	2361	2116	7/29/11	3/30/17	Complete Genome	Public Health Laboratory- Toronto	SAMN02603728	GCA_000221985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/985/GCA_000221985.1_ASM22198v1	21994930	IS7493
Chlamydia psittaci 02DC15	1112254	PRJNA77081	77081	PVC group	Chlamydiae	1.20806	39.2	-	ATKQ01	23	1093	1016	6/25/13	4/1/17	Scaffold	University of Maryland School of Medicine	SAMN00860204	GCA_000415545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/545/GCA_000415545.1_ASM41554v1	-	02DC15
Cyanothece sp. PCC 8801	41431	PRJNA20503	20503	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.78769	39.7959	chromosome:NC_011726.1/CP001287.1; plasmid pP880101:NC_011721.1/CP001288.1; plasmid pP880102:NC_011723.1/CP001289.1; plasmid pP880103:NC_011727.1/CP001290.1	-	4	4505	4326	12/17/08	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000280	GCA_000021805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/805/GCA_000021805.1_ASM2180v1	-	PCC 8801
Neisseria gonorrhoeae DGI18	528347	PRJNA32789	32789	Proteobacteria	Betaproteobacteria	2.11506	52.5	-	ABZH01	42	2352	2099	12/15/08	4/11/17	Scaffold	Broad Institute	SAMN02595240	GCA_000156795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/795/GCA_000156795.1_ASM15679v1	-	DGI18
Streptococcus mutans TCI-145	1074123	PRJNA71997	71997	Terrabacteria group	Firmicutes	1.87779	36.8	-	AGKP01	99	1888	1785	10/6/11	3/22/17	Contig	JCVI	SAMN02436447	GCA_000228945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/945/GCA_000228945.2_SMUT4-NEX_12-145	-	TCI-145
Borrelia garinii IPT105	1408839	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.20456	27.9	-	AYAO01	131	1206	673	12/3/13	4/2/17	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378806	GCA_000501695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/695/GCA_000501695.1_BorGarIPT105	-	IPT105
Streptococcus dysgalactiae subsp. equisimilis	119602	PRJNA327242	327242	Terrabacteria group	Firmicutes	2.05604	39.5	-	MATY01	88	2074	1895	7/9/16	4/5/17	Contig	The UT MD Anderson Cancer Center	SAMN05327340	GCA_001682755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/755/GCA_001682755.1_ASM168275v1	-	UT_4241_XS
Methanobrevibacter smithii TS95C	911131	PRJNA59679	59679	Euryarchaeota	Methanobacteria	1.97885	30.2	-	AELZ01	37	1863	1733	2/17/11	3/30/17	Contig	Washington University in St.Louis	SAMN02436669	GCA_000190095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/095/GCA_000190095.2_ASM19009v2	21317366	TS95C
Microcystis aeruginosa PCC 7005	267870	PRJNA74007	74007	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.90645	42.5	-	AQPY01	1363	4824	4365	3/25/14	4/2/17	Contig	"University of Amsterdam, IBED, AMB"	SAMN02952947	GCA_000599945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/945/GCA_000599945.1_Mic70051.0	24132080	PCC 7005
Bradyrhizobium japonicum CCBAU 83623	1128257	PRJNA77219	77219	Proteobacteria	Alphaproteobacteria	10.0743	63.3	-	AJQB01	1212	10277	8854	5/3/12	5/18/17	Contig	China Agricultural University	SAMN02469465	GCA_000261625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/625/GCA_000261625.1_83623	22586130	CCBAU 83623
Enterococcus faecalis	1351	PRJNA380227	380227	Terrabacteria group	Firmicutes	2.89337	37.3	chromosome:NZ_CP021161.1/CP021161.1	-	1	2930	2808	5/15/17	5/23/17	Chromosome	Laboratoire regional de recherche en agroalimentaire et biotechnologies	SAMN06630023	GCA_002140075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/075/GCA_002140075.1_ASM214007v1	-	DD14
Brucella suis bv. 3 str. 686	520487	PRJNA33035	33035	Proteobacteria	Alphaproteobacteria	3.29853	57.2	-	ACBL01	23	3317	3069	1/23/09	3/30/17	Scaffold	Broad Institute	SAMN02595280	GCA_000157775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/775/GCA_000157775.1_ASM15777v1	-	686
Brucella canis 04-2330-1	1341684	PRJNA217055	217055	Proteobacteria	Alphaproteobacteria	3.31352	57.2	-	AXNG01	4	3361	3150	10/24/13	4/2/17	Contig	Broad Institute	SAMN02334509	GCA_000480295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/295/GCA_000480295.1_Bruc_cani_04-2330-1_V1	-	04-2330-1
Clavibacter michiganensis subsp. michiganensis	33013	PRJNA331203	331203	Terrabacteria group	Actinobacteria	3.46639	72.4	-	MDHK01	107	3268	3091	5/19/17	5/24/17	Contig	University of California	SAMN05439592	GCA_002151105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/105/GCA_002151105.1_ASM215110v1	-	CA00001
Rhizobium leguminosarum bv. viciae UPM1137	1041144	PRJNA162979	162979	Proteobacteria	Alphaproteobacteria	7.69535	60.6	-	ATYN01	49	7537	7207	7/15/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02441574	GCA_000427705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/705/GCA_000427705.1_ASM42770v1	-	UPM1137
Treponema pallidum subsp. pallidum	161	PRJNA271237	271237	Spirochaetes	Spirochaetia	1.13983	52.8	chromosome:NZ_CP010563.1/CP010563.1	-	1	1067	1005	6/3/16	4/5/17	Chromosome	University of Washington	SAMN03273356	GCA_001655435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/435/GCA_001655435.1_ASM165543v1	-	UW189B
Borrelia burgdorferi 64b	498740	PRJNA28633	28633	Spirochaetes	Spirochaetia	1.48588	28.4551	plasmid 64b_cp26:NC_012104.1/CP001422.1; plasmid 64b_cp32-1:NC_012110.1/CP001414.1; plasmid 64b_cp32-11:NC_012112.1/CP001426.1; plasmid 64b_cp32-3-8:NC_012106.1/CP001418.1; plasmid 64b_cp32-4:NC_012105.1/CP001411.1; plasmid 64b_cp32-5:NC_012111.1/CP001415.1; plasmid 64b_cp32-6:NC_012114.1/CP001427.1; plasmid 64b_cp32-7:NC_012113.1/CP001416.1; plasmid 64b_cp32-9:NC_012107.1/CP001424.1; plasmid 64b_lp17:NC_012179.1/CP001413.1; plasmid 64b_lp28-1:NC_012168.1/CP001423.1; plasmid 64b_lp28-2:NC_012196.1/CP001420.1; plasmid 64b_lp28-3:NC_012163.1/CP001417.1; plasmid 64b_lp28-4:NC_012165.1/CP001428.1; plasmid 64b_lp28-5:NC_012174.1/CP001412.1; plasmid 64b_lp36:NC_012184.1/CP001425.1; plasmid 64b_lp38:NC_012182.1/CP001419.1; plasmid 64b_lp54:NC_012199.1/CP001421.1	ABKA02	24	1558	1439	2/6/08	3/30/17	Contig	J. Craig Venter Institute	SAMN02436287	GCA_000172335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/335/GCA_000172335.2_ASM17233v2	-	64b
Burkholderia multivorans	87883	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.34995	67.5	-	LPAZ01	54	5993	5720	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449362	GCA_001526715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/715/GCA_001526715.1_ASM152671v1	-	MSMB1794WGS
Bacillus simplex	1478	PRJNA276291	276291	Terrabacteria group	Firmicutes	5.52172	39.7883	chromosome:NZ_CP011008.1/CP011008.1; plasmid pSHB26:NZ_CP011009.1/CP011009.1	-	2	5327	4922	3/1/16	4/5/17	Complete Genome	Wageningen University	SAMN03372368	GCA_001578185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/185/GCA_001578185.1_ASM157818v1	-	SH-B26
Burkholderia thailandensis MSMB43	441157	PRJNA165167	165167	Proteobacteria	Betaproteobacteria	7.24599	67.1	-	AJXB01	61	6964	6255	6/12/12	5/18/17	Scaffold	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN02470032	GCA_000266985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/985/GCA_000266985.1_ASM26698v1	22887659	MSMB43
Aliivibrio fischeri	668	PRJNA311605	311605	Proteobacteria	Gammaproteobacteria	4.16114	38.2	-	LTZD01	32	3774	3677	5/9/16	4/5/17	Scaffold	MIT	SAMN04520026	GCA_001640505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/505/GCA_001640505.1_ASM164050v1	27128997	KB4B5
Porphyromonas gingivalis W50	1125722	PRJNA78905	78905	FCB group	Bacteroidetes/Chlorobi group	2.24206	48.3	-	AJZS01	104	2046	1855	6/25/12	3/30/17	Contig	J. Craig Venter Institute	SAMN00792205	GCA_000271945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/945/GCA_000271945.1_PgingivalisW50v1.0	-	W50
Lactococcus raffinolactis	1366	PRJNA404006	404006	Terrabacteria group	Firmicutes	2.29223	39.7341	chromosome:NZ_CP023392.1/CP023392.1; plasmid pWiKim0068-1:NZ_CP023393.1/CP023393.1; plasmid pWiKim0068-2:NZ_CP023394.1/CP023394.1	-	3	2258	2123	9/18/17	9/20/17	Complete Genome	world institute of kimchi	SAMN07627433	GCA_002310475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/475/GCA_002310475.1_ASM231047v1	-	WiKim0068
Lactobacillus fermentum Lf1	1318629	PRJNA198062	198062	Terrabacteria group	Firmicutes	1.81565	52.5	-	AWXS01	250	1833	1652	9/30/13	4/2/17	Contig	National Dairy Research Institute	SAMN02053534	GCA_000472265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/265/GCA_000472265.1_LF1_1.0	24233584	Lf1
Sulfolobus islandicus M.16.22	1132500	PRJNA80895	80895	TACK group	Crenarchaeota	2.68099	35.2	-	AHJN01	3	2949	2582	1/25/12	3/30/17	Contig	University of Illinois	SAMN02471818	GCA_000245155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/155/GCA_000245155.2_ASM24515v2	22363207	M.16.22
Lactococcus garvieae	1363	PRJNA320828	320828	Terrabacteria group	Firmicutes	2.06836	38	-	LXWL01	14	2016	1941	5/17/16	4/5/17	Contig	University of Connecticut Graf Lab	SAMN04958039	GCA_001645775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/775/GCA_001645775.1_PAQ99-XT	-	PAQ102015-99
Bifidobacterium adolescentis	1680	PRJNA300965	300965	Terrabacteria group	Actinobacteria	2.59778	59.1	-	LNKD01	11	2288	2139	4/24/17	4/26/17	Contig	University of Parma	SAMN04231310	GCA_002108015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/015/GCA_002108015.1_Bado487Bv1	27035119	487B
Vibrio harveyi	669	PRJNA257174	257174	Proteobacteria	Gammaproteobacteria	5.61807	44.9	-	JPTT01	877	5291	4944	7/22/15	4/3/17	Contig	Naval Research Laboratory	SAMN02948020	GCA_001185495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/495/GCA_001185495.1_ASM118549v1	-	ATCC 35804
Lactobacillus helveticus CIRM-BIA 101	1226336	PRJEB1536	200909	Terrabacteria group	Firmicutes	2.07401	37.2	-	CBUN01	213	2296	1724	10/23/13	4/2/17	Contig	INRA STLO	SAMEA2272118	GCA_000493575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/575/GCA_000493575.1_LhCIRMBIA101V1	-	CIRM-BIA 101
Salinispora arenicola CNH962	1169175	PRJNA182421	182421	Terrabacteria group	Actinobacteria	5.43499	69.6	-	ARKS01	87	4983	4566	4/22/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441665	GCA_000378665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/665/GCA_000378665.1_ASM37866v1	-	CNH962
Lactobacillus casei M36	1051657	PRJNA68469	68469	Terrabacteria group	Firmicutes	3.15213	46.3	-	AFYO01	78	3338	2967	11/2/12	3/30/17	Contig	University of Wisconsin-Madison and Utah State University	SAMN02472000	GCA_000309665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/665/GCA_000309665.1_ASM30966v1	23035691	M36
Coxiella burnetii	777	PRJNA394747	394747	Proteobacteria	Gammaproteobacteria	2.00623	42.5	-	NOLT01	34	2195	1997	8/11/17	8/15/17	Scaffold	National Institutes of Health	SAMN07349489	GCA_002247285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/285/GCA_002247285.1_ASM224728v1	-	Ohio 314 RSA270
Methanosarcina vacuolata Z-761	1434123	PRJNA230962	230962	Euryarchaeota	Methanomicrobia	4.56388	39.7325	chromosome:NZ_CP009520.1/CP009520.1; plasmid unnamed:NZ_CP009519.1/CP009519.1	-	2	3778	3538	4/7/15	4/17/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN03074598	GCA_000969905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/905/GCA_000969905.1_ASM96990v1	-	Z-761
Piscirickettsia salmonis	1238	PRJNA260007	260007	Proteobacteria	Gammaproteobacteria	3.24567	39.7308	chromosome:NZ_CP012413.1/CP012413.1; plasmid pPSA1-1:NZ_CP012414.1/CP012414.1; plasmid pPSA1-2:NZ_CP012415.1/CP012415.1; plasmid pPSA1-3:NZ_CP012416.1/CP012416.1; plasmid pPSA1-4:NZ_CP012417.1/CP012417.1	-	5	3311	3067	8/21/15	4/4/17	Complete Genome	ADL Diagnostic Chile Ltda	SAMN03014721	GCA_000756435.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/435/GCA_000756435.3_ASM75643v3	-	PM15972A1
Aeromonas salmonicida subsp. salmonicida	29491	PRJNA264317	264317	Proteobacteria	Gammaproteobacteria	4.95883	58.3	-	JRYV01	214	4806	4190	11/25/14	4/2/17	Contig	Universite Laval	SAMN03120844	GCA_000786795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/795/GCA_000786795.1_ASM78679v1	-	2009-144K3
Streptococcus mitis SK579	1095737	PRJNA75157	75157	Terrabacteria group	Firmicutes	1.97945	39.9	-	AJJL01	82	1991	1857	4/5/12	3/30/17	Contig	J. Craig Venter Institute	SAMN00761835	GCA_000257905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/905/GCA_000257905.1_SmitisSK579v1.0	-	SK579
Oenococcus oeni IOEB_0205	1428410	PRJNA229526	229526	Terrabacteria group	Firmicutes	1.79504	38	-	AZHH01	42	1841	1640	7/2/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02900023	GCA_000721835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/835/GCA_000721835.1_Oeoe_IOEB_0205_1.0	24901216	IOEB_0205
Piscirickettsia salmonis	1238	PRJNA306730	306730	Proteobacteria	Gammaproteobacteria	3.48905	39.7132	chromosome:NZ_CP013796.1/CP013796.1; plasmid p1PS9:NZ_CP013797.1/CP013797.1; plasmid p2PS9:NZ_CP013798.1/CP013798.1; plasmid p3PS9:NZ_CP013799.1/CP013799.1; plasmid p4PS9:NZ_CP013800.1/CP013800.1	-	5	3597	3193	1/4/17	4/6/17	Complete Genome	ADL Diagnostic Chile Ltda	SAMN04362180	GCA_001932875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/875/GCA_001932875.1_ASM193287v1	-	AY6532B
Campylobacter fetus subsp. venerealis cfvB10	1273279	PRJNA184006	184006	Proteobacteria	delta/epsilon subdivisions	1.91298	33.1	-	LRET01	133	1981	1845	8/5/16	4/5/17	Contig	Utrecht University	SAMN04419561	GCA_001698965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/965/GCA_001698965.1_ASM169896v1	27333878	cfvB10
Proteus mirabilis	584	PRJNA340922	340922	Proteobacteria	Gammaproteobacteria	4.28659	39.7105	chromosome:NZ_CP017082.1/CP017082.1; plasmid pT211:NZ_CP017083.1/CP017083.1; plasmid pT212:NZ_CP017084.1/CP017084.1	-	3	4110	3838	9/18/17	9/20/17	Complete Genome	Zhejiang University	SAMN05715221	GCA_002310875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/875/GCA_002310875.1_ASM231087v1	-	T21
Leptospira borgpetersenii str. 200801926	1193009	PRJNA167250	167250	Spirochaetes	Spirochaetia	3.97439	40.2	-	AKWJ02	39	3856	3534	10/17/12	3/31/17	Contig	J. Craig Venter Institute	SAMN02436387	GCA_000306375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/375/GCA_000306375.2_gls454128v2.0	-	200801926
Lactobacillus delbrueckii subsp. delbrueckii DSM 20074 = JCM 1012	1423823	PRJNA354490	354490	Terrabacteria group	Firmicutes	1.95372	49.6	chromosome:NZ_CP018615.1/CP018615.1	-	1	1984	1587	12/19/16	4/6/17	Chromosome	Korea University	SAMN06046523	GCA_001908495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/495/GCA_001908495.1_ASM190849v1	-	DSM 20074
Yersinia pseudotuberculosis B-6864	1286087	PRJEB1340	187439	Proteobacteria	Gammaproteobacteria	4.22649	47.5	-	CAQW01	237	3878	3584	2/20/13	5/19/17	Contig	UPSUD	SAMEA2272064	GCA_000344015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/015/GCA_000344015.1_ASM34401v1	23580708	B-6864
Brucella abortus	235	PRJNA400357	400357	Proteobacteria	Alphaproteobacteria	3.30261	57.1707	chromosome 1:CP023215.1; chromosome 2:CP023216.1	-	2	3392	2982	9/12/17	9/12/17	Chromosome	IZSM-Portici	SAMN07572672	GCA_002290665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/665/GCA_002290665.1_ASM229066v1	-	40046
Butyrivibrio hungatei	185008	PRJNA349214	349214	Terrabacteria group	Firmicutes	3.38631	39.7046	chromosome I:NZ_CP017831.1/CP017831.1; chromosome II:NZ_CP017830.1/CP017830.1; plasmid pNP144:NZ_CP017832.1/CP017832.1; plasmid pNP6:NZ_CP017833.1/CP017833.1	-	4	3078	2989	10/31/16	4/13/17	Complete Genome	AgResearch	SAMN05928573	GCA_001858005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/005/GCA_001858005.1_ASM185800v1	-	MB2003
Streptococcus salivarius	1304	PRJNA274768	274768	Terrabacteria group	Firmicutes	2.2939	39.6	-	JYOX01	21	2186	2018	3/25/15	4/3/17	Contig	University at Buffalo	SAMN03334907	GCA_000963335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/335/GCA_000963335.1_ASM96333v1	25999552	KB005
Shigella boydii	621	PRJNA288166	288166	Proteobacteria	Gammaproteobacteria	4.3336	50.6	-	LPTP01	463	5017	4089	12/15/16	2/26/17	Contig	"University of Maryland, School of Medicine"	SAMN04001691	GCA_001905945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/945/GCA_001905945.1_ASM190594v1	-	600710
Clostridioides difficile CIP 107932	499176	PRJNA28561	28561	Terrabacteria group	Firmicutes	4.03668	28.3386	chromosome:NZ_CM000659.1/CM000659.1	ABKK02	15	3692	3468	2/12/08	3/15/17	Chromosome	McGill University and Genome Quebec	SAMN02470535	GCA_000155045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/045/GCA_000155045.1_cdeaa	-	CIP 107932
Maribacter sp. B1	1178778	PRJNA398646	398646	FCB group	Bacteroidetes/Chlorobi group	4.63996	39.7	chromosome:NZ_CP022957.1/CP022957.1	-	1	4163	4049	8/24/17	9/8/17	Complete Genome	"Second Institute of Oceanography, State Oceanic Administration"	SAMN07514628	GCA_002269385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/385/GCA_002269385.1_ASM226938v1	-	B1
Candidatus Pelagibacter ubique	198252	PRJEB9287	287342	Proteobacteria	Alphaproteobacteria	1.05053	29.2	-	CVSN01	61	1094	1020	6/17/15	4/10/17	Contig	UNIVERSITY OF CALIFORNIA - SAN DIEGO	SAMEA3368565	GCA_001180085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/085/GCA_001180085.1_CLC_assembled_contigs	-	SCGC AAA795-M18
Corynebacterium jeikeium	38289	PRJEB16021	349437	Terrabacteria group	Actinobacteria	2.30623	61.6	-	FMTZ01	23	2062	1977	10/20/16	4/5/17	Contig	CEBITEC	SAMEA4506857	GCA_900100745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/745/GCA_900100745.1_CJ	-	-
Ralstonia solanacearum Rs-10-244	1457195	PRJNA236788	236788	Proteobacteria	Betaproteobacteria	5.68831	66.8534	chromosome:NZ_CM002755.1/CM002755.1; plasmid unnamed1 :NZ_CM002756.1/CM002756.1	JHAM01	36	5119	4791	4/21/14	4/2/17	Chromosome	ICAR Research Complex for Goa	SAMN02602917	GCA_000671315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/315/GCA_000671315.1_RALSO244-G1	24874667	Rs-10-244
Candidatus Nucleicultrix amoebiphila FS5	1414854	PRJNA251793	251793	Proteobacteria	Alphaproteobacteria	1.83821	39.7	chromosome:NZ_CP008743.1/CP008743.1	-	1	1818	1750	5/2/17	5/6/17	Complete Genome	University of Vienna	SAMN02840763	GCA_002117145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/145/GCA_002117145.1_ASM211714v1	-	FS5
Fictibacillus arsenicus	255247	PRJNA283673	283673	Terrabacteria group	Firmicutes	4.05546	39.7	chromosome:NZ_CP016761.1/CP016761.1	-	1	4139	3989	8/2/16	4/13/17	Complete Genome	Institute of Life Sciences and Technology	SAMN03654018	GCA_001642935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/935/GCA_001642935.2_ASM164293v2	-	G25-54
Bacillus pumilus	1408	PRJNA270572	270572	Terrabacteria group	Firmicutes	3.65023	41.6	-	JXCK01	29	3744	3630	1/26/15	4/3/17	Scaffold	University of Groningen	SAMN03267268	GCA_000828395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/395/GCA_000828395.1_ASM82839v1	25767247	B4107
Streptococcus sp. oral taxon 431	712633	PRJNA282954	282954	Terrabacteria group	Firmicutes	2.1779	39.7	chromosome:NZ_CP014264.1/CP014264.1	-	1	2099	1945	2/9/16	4/16/17	Complete Genome	The Forsyth Institute	SAMN04435859	GCA_001553685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/685/GCA_001553685.1_ASM155368v1	-	F0610 (5-114)
Capnocytophaga sp. oral taxon 323	1705617	PRJNA282954	282954	FCB group	Bacteroidetes/Chlorobi group	2.61453	39.7	chromosome:NZ_CP012589.1/CP012589.1	-	1	2349	2168	9/4/15	4/11/17	Complete Genome	The Forsyth Institute	SAMN04009744	GCA_001278825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/825/GCA_001278825.1_ASM127882v1	-	F0383
Burkholderia cenocepacia	95486	PRJNA379546	379546	Proteobacteria	Betaproteobacteria	8.04369	67.1053	chromosome 1:NZ_CP020599.1/CP020599.1; chromosome 2:NZ_CP020600.1/CP020600.1; chromosome 3:NZ_CP020601.1/CP020601.1	-	3	7627	7074	4/10/17	4/17/17	Chromosome	N.F.Gamaleya Research Center for Epidemiology and Microbiology	SAMN06611151	GCA_002083015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/015/GCA_002083015.1_ASM208301v1	-	GIMC4560:Bcn122
Lactobacillus reuteri	1598	PRJNA248653	248653	Terrabacteria group	Firmicutes	2.03203	38.4	-	JOKX02	12	1995	1755	7/7/14	4/4/17	Contig	University of Alberta	SAMN02840984	GCA_000722535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/535/GCA_000722535.2_ASM72253v2	-	TMW1.112
Streptococcus pneumoniae	1313	PRJEB9161	284475	Terrabacteria group	Firmicutes	1.98341	39.7	chromosome I:NZ_LN847353.1/LN847353.1	-	1	2178	1934	5/20/15	3/11/17	Complete Genome	University of Hull	SAMEA3367470	GCA_001255215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/215/GCA_001255215.1_S_pneumo_A66_v1	-	A66
Bacteroides fragilis	817	PRJNA257719	257719	FCB group	Bacteroidetes/Chlorobi group	5.20646	43.1	-	LTZK01	52	4623	4355	3/3/16	4/5/17	Scaffold	The Genome Institute at Washington University	SAMN03956218	GCA_001580095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/095/GCA_001580095.1_ASM158009v1	-	KLE1758
Shigella sonnei 09-2245	1212583	PRJNA171090	171090	Proteobacteria	Gammaproteobacteria	4.86234	51	-	AMKK01	92	5340	4389	1/6/15	8/8/17	Contig	Institute for Genome Sciences	SAMN03276470	GCA_000815905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/905/GCA_000815905.1_ASM81590v1	-	Sep-45
Pasteurella multocida subsp. multocida OH4807	1304873	PRJNA192964	192964	Proteobacteria	Gammaproteobacteria	2.07912	39.7	chromosome:NZ_CP004391.1/CP004391.1	-	1	2012	1885	4/20/15	4/3/17	Complete Genome	"University of California, Davis, School of Veterinary Medicine"	SAMN03492041	GCA_000973525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/525/GCA_000973525.1_ASM97352v1	-	OH4807
Bacillus licheniformis CGMCC 3963	1232672	PRJNA175351	175351	Terrabacteria group	Firmicutes	4.51489	45.6	-	AMWQ01	152	4782	4598	11/29/12	5/18/17	Contig	Jiangnan University	SAMN02470109	GCA_000315975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/975/GCA_000315975.1_mt6	23405325	CGMCC 3963
Histophilus somni	731	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.26895	37.3	-	LQGK01	63	2138	1980	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366584	GCA_001931085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/085/GCA_001931085.1_ASM193108v1	-	3849HS
Vibrio vulnificus B2	1229202	PRJNA174154	174154	Proteobacteria	Gammaproteobacteria	4.664	46.7	-	AMQR01	193	4290	4111	10/5/12	5/19/17	Contig	Zhejiang University	SAMN02471155	GCA_000303175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/175/GCA_000303175.1_C224contig	23209257	B2
Pseudomonas syringae pv. actinidiae str. M302091	629266	PRJNA33217	33217	Proteobacteria	Gammaproteobacteria	5.90173	58.7	-	AEAL01	414	5627	5050	7/8/10	5/19/17	Scaffold	University of North Carolina at Chapel Hill	SAMN02471320	GCA_000145865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/865/GCA_000145865.1_ASM14586v1	21799664	M302091
Streptococcus pneumoniae	1313	PRJEB6403	251923	Terrabacteria group	Firmicutes	2.11097	39.7	chromosome 1:NZ_LN831051.1/LN831051.1	-	1	2330	2064	3/22/15	3/13/17	Complete Genome	SC	SAMEA2479568	GCA_001457635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/635/GCA_001457635.1_NCTC7465	-	NCTC7465
Methanobacterium sp. MB1	1379702	PRJEB4386	227910	Euryarchaeota	Methanobacteria	2.02977	39.7	chromosome I:NC_023044.1/HG425166.1	-	1	2048	1956	11/14/13	4/9/17	Complete Genome	irena.maus	SAMEA3138830	GCA_000499765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/765/GCA_000499765.1_Methanobacterium	-	-
Streptococcus pneumoniae ST556	1130804	PRJNA80663	80663	Terrabacteria group	Firmicutes	2.15081	39.7	chromosome:NC_017769.2/CP003357.2	-	1	2359	2110	3/6/12	3/11/17	Complete Genome	Tsinghua University	SAMN02604071	GCA_000251085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/085/GCA_000251085.2_ASM25108v2	"1,867,062,322,628,510"	ST556
Streptococcus pneumoniae 70585	488221	PRJNA28043	28043	Terrabacteria group	Firmicutes	2.18468	39.7	chromosome:NC_012468.1/CP000918.1	-	1	2397	2134	3/27/09	3/9/17	Complete Genome	J. Craig Venter Institute	SAMN02603446	GCA_000018965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/965/GCA_000018965.1_ASM1896v1	-	70585
Streptococcus pneumoniae JJA	488222	PRJNA28039	28039	Terrabacteria group	Firmicutes	2.12023	39.7	chromosome:NC_012466.1/CP000919.1	-	1	2285	2057	3/27/09	9/12/17	Complete Genome	J. Craig Venter Institute	SAMN02603444	GCA_000018985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/985/GCA_000018985.1_ASM1898v1	-	JJA
Fusobacterium nucleatum subsp. animalis 3_1_33	469603	PRJNA38519	38519	Fusobacteria	Fusobacteriia	2.30209	27.1	-	ACQE02	5	2223	2072	9/30/09	4/2/17	Scaffold	Broad Institute	SAMN02463746	GCA_000162355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/355/GCA_000162355.2_Fuso_sp_3_1_33_V2	-	3_1_33
Agrobacterium tumefaciens	358	PRJEB5272	247743	Proteobacteria	Alphaproteobacteria	6.00434	59.5	-	CCAN01	60	5793	5574	5/11/14	4/2/17	Contig	SVSB	SAMEA3139026	GCA_000723345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/345/GCA_000723345.1_AGROS2_V1	-	S2
Shigella flexneri	623	PRJNA244354	244354	Proteobacteria	Gammaproteobacteria	4.53355	50.6	-	JPPN01	10	5093	4247	9/11/14	3/9/17	Scaffold	Los Alamos National Laboratory	SAMN02905008	GCA_000754175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/175/GCA_000754175.1_SFC	25359907	ATCC 12022
Streptococcus pneumoniae P1031	488223	PRJNA28041	28041	Terrabacteria group	Firmicutes	2.11188	39.7	chromosome:NC_012467.1/CP000920.1	-	1	2336	2081	3/27/09	3/9/17	Complete Genome	J. Craig Venter Institute	SAMN02603445	GCA_000019005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/005/GCA_000019005.1_ASM1900v1	-	P1031
Streptococcus pneumoniae G54	512566	PRJNA29047	29047	Terrabacteria group	Firmicutes	2.07895	39.7	chromosome:NC_011072.1/CP001015.1	-	1	2269	1986	7/22/08	3/8/17	Complete Genome	Institute for Genome Sciences	SAMN02603350	GCA_000019825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/825/GCA_000019825.1_ASM1982v1	11442348	G54
Xylella fastidiosa EB92.1	945689	PRJNA61791	61791	Proteobacteria	Gammaproteobacteria	2.47543	51.5	-	AFDJ01	168	2362	2153	6/24/11	3/30/17	Contig	University of Florida	SAMN02471770	GCA_000219235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/235/GCA_000219235.2_ASM21923v2	21914886	EB92.1
Nitratiruptor sp. SB155-2	387092	PRJDA18963	18963	Proteobacteria	delta/epsilon subdivisions	1.87793	39.7	chromosome:NC_009662.1/AP009178.1	-	1	1982	1912	7/11/07	4/17/17	Complete Genome	Japan Agency for Marine-Earth Science and Technology	SAMD00060914	GCA_000010325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/325/GCA_000010325.1_ASM1032v1	"1,615,673,517,615,240"	SB155-2
Actinobacillus pleuropneumoniae	715	PRJNA266232	266232	Proteobacteria	Gammaproteobacteria	2.21338	41.1	-	JSVG01	55	2133	1758	1/12/15	4/2/17	Contig	LNCC	SAMN03160380	GCA_000817465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/465/GCA_000817465.1_ASM81746v1	25745011	460
Leptospira interrogans serovar Pomona str. Pomona	1001587	PRJNA65043	65043	Spirochaetes	Spirochaetia	4.58102	35	-	AFLT02	43	4169	3666	6/7/11	5/19/17	Contig	J. Craig Venter Institute	SAMN02436547	GCA_000216355.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/355/GCA_000216355.3_gls454014v2.0	-	Pomona
Streptococcus pneumoniae D39	373153	PRJNA16374	16374	Terrabacteria group	Firmicutes	2.04611	39.7	chromosome:NC_008533.1/CP000410.1	-	1	2220	1996	10/12/06	4/6/17	Complete Genome	TIGR	SAMN02604051	GCA_000014365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/365/GCA_000014365.1_ASM1436v1	17041037	D39
Streptococcus pneumoniae R6	171101	PRJNA278	278	Terrabacteria group	Firmicutes	2.03862	39.7	chromosome:NC_003098.1/AE007317.1	-	1	1967	1814	10/3/01	1/11/17	Complete Genome	Eli Lilly and Company	SAMN02603218	GCA_000007045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/045/GCA_000007045.1_ASM704v1	11544234	R6
Streptococcus pneumoniae TIGR4	170187	PRJNA277	277	Terrabacteria group	Firmicutes	2.16084	39.7	chromosome:NC_003028.3/AE005672.3	-	1	2344	2092	10/3/01	3/15/17	Complete Genome	TIGR	SAMN02604002	GCA_000006885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/006/885/GCA_000006885.1_ASM688v1	11463916	TIGR4; ATCC BAA-334
Acinetobacter haemolyticus	29430	PRJNA358138	358138	Proteobacteria	Gammaproteobacteria	3.53884	39.6994	chromosome:NZ_CP018871.1/CP018871.1; plasmid unnamed1:NZ_CP018872.1/CP018872.1; plasmid unnamed2:NZ_CP018873.1/CP018873.1	-	3	3469	3211	12/30/16	4/6/17	Complete Genome	Tianjin University	SAMN06166709	GCA_001932555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/555/GCA_001932555.1_ASM193255v1	-	TJS01
Proteus mirabilis	584	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	4.58718	39.689	chromosome:NZ_CP021694.1/CP021694.1; plasmid tig00000123:NZ_CP021695.1/CP021695.1	-	2	4399	4200	6/8/17	6/10/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014996	GCA_002180235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/235/GCA_002180235.1_ASM218023v1	-	AR_0155
Streptococcus salivarius	1304	PRJNA227252	227252	Terrabacteria group	Firmicutes	2.32635	39.6824	chromosome:NZ_CP015283.1/CP015283.1; plasmid unnamed:NZ_CP015284.1/CP015284.1	-	2	2177	2002	4/18/17	4/21/17	Complete Genome	Illinois Institute of Technology	SAMN02401019	GCA_002094975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/975/GCA_002094975.1_ASM209497v1	-	ATCC 25975
Haemophilus influenzae 3655	375177	PRJNA16395	16395	Proteobacteria	Gammaproteobacteria	1.87837	38	-	AAZF01	23	1911	1722	4/11/07	4/10/17	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393737	GCA_000169775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/775/GCA_000169775.1_ASM16977v1	17550610	3655
Prochlorococcus marinus str. MIT 9201	93057	PRJNA246696	246696	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.67242	31.3	-	JNAL01	21	1892	1802	9/29/14	4/2/17	Contig	MIT	SAMN02769555	GCA_000759955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/955/GCA_000759955.1_ASM75995v1	25977791	MIT 9201
Tropheryma whipplei str. Bcu26	1294039	PRJEB1456	189639	Terrabacteria group	Actinobacteria	0.880271	46.4	-	CAVB01	138	856	787	3/28/13	3/31/17	Contig	URMITE	SAMEA2272123	GCA_000359405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/405/GCA_000359405.1_ASM35940v1	-	Bcu26
Mycobacterium bovis MAL010093	1354193	PRJNA211645	211645	Terrabacteria group	Actinobacteria	4.3913	65.5	-	JLAP01	4	4251	4047	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02231112	GCA_000666385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/385/GCA_000666385.1_Myco_bovi_MAL010093_V1	-	MAL010093
Mycobacterium avium subsp. paratuberculosis	1770	PRJNA297385	297385	Terrabacteria group	Actinobacteria	4.72705	69.3	-	LKUT01	240	4599	4190	12/14/16	4/6/17	Scaffold	China agricultural university	SAMN04121035	GCA_001904595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/595/GCA_001904595.1_ASM190459v1	27006704	2015WD-2
Clostridium perfringens B str. ATCC 3626	451754	PRJNA20027	20027	Terrabacteria group	Firmicutes	3.8963	28.4	-	ABDV01	98	3558	3289	7/11/07	4/6/17	Contig	J. Craig Venter Institute	SAMN02436295	GCA_000171155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/155/GCA_000171155.1_ASM17115v1	-	ATCC 3626
Xanthomonas campestris pv. musacearum NCPPB 2005	1094183	PRJNA73875	73875	Proteobacteria	Gammaproteobacteria	4.69276	63.5	-	AKBE01	156	4267	3774	7/17/12	5/28/17	Scaffold	University of Exeter	SAMN02471727	GCA_000277875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/875/GCA_000277875.1_Xcm2005v1	24704974	NCPPB 2005
Piscirickettsia salmonis	1238	PRJNA306730	306730	Proteobacteria	Gammaproteobacteria	3.28546	39.6511	chromosome:NZ_CP013773.1/CP013773.1; plasmid p1PS4:NZ_CP013774.1/CP013774.1; plasmid p2PS4:NZ_CP013775.1/CP013775.1; plasmid p3PS4:NZ_CP013776.1/CP013776.1; plasmid p4PS4:NZ_CP013777.1/CP013777.1	-	5	3392	3114	1/4/17	4/6/17	Complete Genome	ADL Diagnostic Chile Ltda	SAMN04362174	GCA_001932775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/775/GCA_001932775.1_ASM193277v1	-	PM37984A
Piscirickettsia salmonis	1238	PRJNA306730	306730	Proteobacteria	Gammaproteobacteria	3.3082	39.6438	chromosome:NZ_CP013768.1/CP013768.1; plasmid p1PS3:NZ_CP013769.1/CP013769.1; plasmid p2PS3:NZ_CP013770.1/CP013770.1; plasmid p3PS3:NZ_CP013771.1/CP013771.1; plasmid p4PS3:NZ_CP013772.1/CP013772.1	-	5	3437	3061	1/4/17	4/6/17	Complete Genome	ADL Diagnostic Chile Ltda	SAMN04362173	GCA_001932755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/755/GCA_001932755.1_ASM193275v1	-	PM23019A
Staphylococcus epidermidis SK135	596317	PRJNA34077	34077	Terrabacteria group	Firmicutes	2.51804	32.2	-	ADEY01	33	2491	2254	12/15/09	3/22/17	Contig	J. Craig Venter Institute	SAMN00008358	GCA_000177115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/115/GCA_000177115.1_ASM17711v1	-	SK135
Piscirickettsia salmonis	1238	PRJNA306730	306730	Proteobacteria	Gammaproteobacteria	3.42972	39.6399	chromosome:NZ_CP013778.1/CP013778.1; plasmid p1PS5:NZ_CP013779.1/CP013779.1; plasmid p2PS5:NZ_CP013780.1/CP013780.1	-	3	3631	3303	1/4/17	4/6/17	Complete Genome	ADL Diagnostic Chile Ltda	SAMN04362175	GCA_001932795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/795/GCA_001932795.1_ASM193279v1	-	PM51819A
Piscirickettsia salmonis	1238	PRJNA304762	304762	Proteobacteria	Gammaproteobacteria	3.42354	39.6368	chromosome:NZ_CP013975.1/CP013975.1; plasmid pPSCRG02-1:NZ_CP013976.1/CP013976.1; plasmid pPSCRG02-2:NZ_CP013977.1/CP013977.1; plasmid pPSCRG02-4:NZ_CP013978.1/CP013978.1	-	4	3499	3107	1/25/16	4/4/17	Complete Genome	University of Chile	SAMN04309076	GCA_001534725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/725/GCA_001534725.1_ASM153472v1	-	CGR02
Pseudomonas fluorescens	294	PRJNA273571	273571	Proteobacteria	Gammaproteobacteria	6.9211	60.5	chromosome:NZ_CP015225.1/CP015225.1	-	1	6219	5979	4/19/16	5/29/17	Chromosome	Lawrence Berkeley National Laboratory	SAMN03294340	GCA_001623525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/525/GCA_001623525.1_ASM162352v1	-	FW300-N2E2
Streptococcus sp. FDAARGOS_192	1839799	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.43547	39.6296	chromosome:NZ_CP020431.1/CP020431.1; plasmid unnamed1:NZ_CP020429.1/CP020429.1; plasmid unnamed2:NZ_CP020430.1/CP020430.1	-	3	2266	2100	3/29/17	4/1/17	Complete Genome	US Food and Drug Administration 	SAMN04875529	GCA_002073815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/815/GCA_002073815.1_ASM207381v1	-	FDAARGOS_192
Piscirickettsia salmonis	1238	PRJNA306730	306730	Proteobacteria	Gammaproteobacteria	3.51561	39.6218	chromosome:NZ_CP013781.1/CP013781.1; plasmid p1PS6:NZ_CP013782.1/CP013782.1; plasmid p2PS6:NZ_CP013783.1/CP013783.1; plasmid p3PS6:NZ_CP013784.1/CP013784.1; plasmid p4PS6:NZ_CP013785.1/CP013785.1	-	5	3615	3190	1/4/17	4/6/17	Complete Genome	ADL Diagnostic Chile Ltda	SAMN04362177	GCA_001932815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/815/GCA_001932815.1_ASM193281v1	-	PM49811B
Piscirickettsia salmonis	1238	PRJNA306730	306730	Proteobacteria	Gammaproteobacteria	3.51638	39.6218	chromosome:NZ_CP013786.1/CP013786.1; plasmid p1PS7:NZ_CP013787.1/CP013787.1; plasmid p2PS7:NZ_CP013788.1/CP013788.1; plasmid p3PS7:NZ_CP013789.1/CP013789.1; plasmid p4PS7:NZ_CP013790.1/CP013790.1	-	5	3611	3228	1/4/17	4/6/17	Complete Genome	ADL Diagnostic Chile Ltda	SAMN04362178	GCA_001932835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/835/GCA_001932835.1_ASM193283v1	-	PM58386B
Piscirickettsia salmonis	1238	PRJNA306730	306730	Proteobacteria	Gammaproteobacteria	3.51577	39.6218	chromosome 1:NZ_CP013806.1/CP013806.1; plasmid p1PS12:NZ_CP013807.1/CP013807.1; plasmid p2PS12:NZ_CP013808.1/CP013808.1; plasmid p3PS12:NZ_CP013809.1/CP013809.1; plasmid p4PS12:NZ_CP013810.1/CP013810.1	-	5	3609	3226	1/4/17	4/6/17	Complete Genome	ADL Diagnostic Chile Ltda	SAMN04376290	GCA_001932915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/915/GCA_001932915.1_ASM193291v1	-	PM31429B
Piscirickettsia salmonis	1238	PRJNA306730	306730	Proteobacteria	Gammaproteobacteria	3.35447	39.6204	chromosome:NZ_CP013757.1/CP013757.1; plasmid p1PS1:NZ_CP013758.1/CP013758.1; plasmid p2PS1:NZ_CP013759.1/CP013759.1; plasmid p3PS1:NZ_CP013760.1/CP013760.1; plasmid p4PS1:NZ_CP013761.1/CP013761.1	-	5	3466	3168	1/4/17	4/6/17	Complete Genome	ADL Diagnostic Chile Ltda	SAMN04362159	GCA_001932595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/595/GCA_001932595.1_ASM193259v1	-	AY6492A
Piscirickettsia salmonis	1238	PRJNA306730	306730	Proteobacteria	Gammaproteobacteria	3.3491	39.6202	chromosome:NZ_CP013762.1/CP013762.1; plasmid p1PS2:NZ_CP013763.1/CP013763.1; plasmid p2PS2:NZ_CP013764.1/CP013764.1; plasmid p3PS2:NZ_CP013765.1/CP013765.1; plasmid p4PS2:NZ_CP013766.1/CP013766.1; plasmid p5PS2:NZ_CP013767.1/CP013767.1	-	6	3467	3165	1/4/17	4/6/17	Complete Genome	ADL Diagnostic Chile Ltda	SAMN04362160	GCA_001932735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/735/GCA_001932735.1_ASM193273v1	-	PM21567A
Pseudomonas fluorescens	294	PRJNA345279	345279	Proteobacteria	Gammaproteobacteria	5.75896	59.3	chromosome:CP017951.1	-	1	-	-	11/14/16	11/14/16	Chromosome	CREA	SAMN05860393	GCA_001878715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/715/GCA_001878715.1_ASM187871v1	-	CREA-C16
Piscirickettsia salmonis LF-89 = ATCC VR-1361	1227812	PRJNA173790	173790	Proteobacteria	Gammaproteobacteria	3.50751	39.6194	chromosome:NZ_CP011849.2/CP011849.2; plasmid pPSLF89-1:NZ_CP011850.1/CP011850.1; plasmid pPSLF89-2:NZ_CP011851.1/CP011851.1; plasmid pPSLF89-3:NZ_CP011852.1/CP011852.1; plasmid pPSLF89-4:NZ_CP013669.1/CP013669.1	-	5	3610	3202	7/9/15	6/15/17	Complete Genome	Mathomics	SAMN02469424	GCA_000300295.4	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/295/GCA_000300295.4_ASM30029v4	26141111	ATCC VR-1361
Piscirickettsia salmonis	1238	PRJNA306730	306730	Proteobacteria	Gammaproteobacteria	3.50973	39.6192	chromosome 1:NZ_CP013801.1/CP013801.1; plasmid p1PS13:NZ_CP013802.1/CP013802.1; plasmid p2PS13:NZ_CP013803.1/CP013803.1; plasmid p3PS13:NZ_CP013804.1/CP013804.1; plasmid p4PS13:NZ_CP013805.1/CP013805.1	-	5	3597	3214	1/4/17	4/6/17	Complete Genome	ADL Diagnostic Chile Ltda	SAMN04376232	GCA_001932895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/895/GCA_001932895.1_ASM193289v1	-	PM22180B
Staphylococcus epidermidis FRI909	764544	PRJNA48603	48603	Terrabacteria group	Firmicutes	2.54184	31.8	-	AENR01	56	2520	2352	1/15/11	3/22/17	Contig	University at Buffalo/Center of Excellence/Infectious Disease and Genomics	SAMN00138731	GCA_000186205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/205/GCA_000186205.2_ASM18620v2	21317317	FRI909
Piscirickettsia salmonis	1238	PRJNA259745	259745	Proteobacteria	Gammaproteobacteria	3.50968	39.6192	chromosome:NZ_CP012508.1/CP012508.1; plasmid pPSB1-1:NZ_CP012509.1/CP012509.1; plasmid pPSB1-2:NZ_CP012510.1/CP012510.1; plasmid pPSB1-3:NZ_CP012511.1/CP012511.1; plasmid pPSB1-4:NZ_CP012512.1/CP012512.1	-	5	3597	3207	8/31/15	4/4/17	Complete Genome	ADL Diagnostic Chile Ltda	SAMN03012752	GCA_000756415.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/415/GCA_000756415.3_ASM75641v3	25523762	PM32597B1
Piscirickettsia salmonis	1238	PRJNA304760	304760	Proteobacteria	Gammaproteobacteria	3.48974	39.6191	chromosome:NZ_CP013944.1/CP013944.1; plasmid pPSCRG01-4:NZ_CP013945.1/CP013945.1; plasmid pPsCRG01-1:NZ_CP013946.1/CP013946.1; plasmid pPsCRG01-2:NZ_CP013947.1/CP013947.1; plasmid pPsCRG01-3:NZ_CP013948.1/CP013948.1	-	5	3590	3166	1/14/16	4/5/17	Complete Genome	University of Chile	SAMN04309069	GCA_001514395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/395/GCA_001514395.1_ASM151439v1	-	PSCGR01
Xanthomonas campestris pv. musacearum NCPPB 4379	1094184	PRJNA73877	73877	Proteobacteria	Gammaproteobacteria	4.7582	63.4	-	AKBF01	95	4343	3782	7/17/12	5/28/17	Scaffold	University of Exeter	SAMN00991242	GCA_000277895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/895/GCA_000277895.1_Xcm4379v1	24704974	NCPPB 4379
Clostridium perfringens E str. JGS1987	451755	PRJNA20029	20029	Terrabacteria group	Firmicutes	4.1271	28.1	-	ABDW01	101	3896	3582	7/11/07	5/18/17	Contig	J. Craig Venter Institute	SAMN02436167	GCA_000171175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/175/GCA_000171175.1_ASM17117v1	-	JGS1987
Mycobacterium avium subsp. avium ATCC 25291	553481	PRJNA30909	30909	Terrabacteria group	Actinobacteria	4.85799	69.2	-	ACFI01	258	4694	4309	1/27/09	5/19/17	Contig	McGill University	SAMN02470543	GCA_000174035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/035/GCA_000174035.1_ASM17403v1	-	ATCC 25291
Mycobacterium bovis BCG str. China	998089	PRJNA63833	63833	Terrabacteria group	Actinobacteria	4.26172	65.5	-	AEZE01	29	4211	3910	3/28/11	5/19/17	Contig	"Microbial Genome Research Center, CASPMI, IM-CAS"	SAMN00771606	GCA_000194015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/015/GCA_000194015.2_ASM19401v2	21478353	China
Tropheryma whipplei str. Neuro14	1294030	PRJEB1447	189645	Terrabacteria group	Actinobacteria	0.885853	46.4	-	CAUR03	154	858	792	4/15/13	4/3/17	Contig	URMITE	SAMEA2272346	GCA_000376505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/505/GCA_000376505.2_ASM37650v2	-	Neuro14
Prochlorococcus marinus str. MIT 9302	74545	PRJNA246696	246696	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.74534	31.1	-	JNAM01	17	1936	1850	9/29/14	4/2/17	Contig	MIT	SAMN02769556	GCA_000759975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/975/GCA_000759975.1_ASM75997v1	25977791	MIT 9302
Haemophilus influenzae PittAA	374928	PRJNA16399	16399	Proteobacteria	Gammaproteobacteria	1.87689	38.1	-	AAZG01	40	1945	1757	4/13/07	3/22/17	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393739	GCA_000169795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/795/GCA_000169795.1_ASM16979v1	17550610	PittAA
Piscirickettsia salmonis	1238	PRJNA306730	306730	Proteobacteria	Gammaproteobacteria	3.51124	39.6177	chromosome 1:NZ_CP013821.1/CP013821.1; plasmid p1PS14:NZ_CP013822.1/CP013822.1; plasmid p2PS14:NZ_CP013823.1/CP013823.1; plasmid p3PS14:NZ_CP013824.1/CP013824.1; plasmid p4PS14:NZ_CP013825.1/CP013825.1	-	5	3726	3045	1/4/17	4/11/17	Complete Genome	ADL Diagnostic Chile Ltda	SAMN04376257	GCA_001932955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/955/GCA_001932955.1_ASM193295v1	-	PM25344B
Streptococcus pneumoniae	1313	PRJDB5486	368847	Terrabacteria group	Firmicutes	2.14848	39.6	chromosome:AP017971.1	-	1	2234	2164	1/25/17	1/25/17	Complete Genome	"Department of Infectious Diseases, Keio University School of Medicine"	SAMD00073590	GCA_002357995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/995/GCA_002357995.1_ASM235799v1	-	KK0981
Mannheimia sp. USDA-ARS-USMARC-1261	1432056	PRJNA230389	230389	Proteobacteria	Gammaproteobacteria	2.39345	39.6	chromosome:NZ_CP006942.1/CP006942.1	-	1	2373	2225	1/22/14	4/9/17	Complete Genome	USDA-ARS-USMARC	SAMN03081505	GCA_000521605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/605/GCA_000521605.1_ASM52160v1	24526648	USDA-ARS-USMARC-1261
Streptococcus dysgalactiae subsp. equisimilis 167	1247189	PRJDB689	222530	Terrabacteria group	Firmicutes	2.0764	39.6	chromosome 1:AP012976.1	-	1	2294	2223	10/4/13	10/7/16	Complete Genome	National Center for Global Health and Medicine	SAMD00061054	GCA_000493775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/775/GCA_000493775.1_ASM49377v1	-	167
Streptococcus pneumoniae 670-6B	189423	PRJNA292	292	Terrabacteria group	Firmicutes	2.24004	39.6	chromosome:NC_014498.1/CP002176.1	-	1	2472	2199	9/9/10	3/9/17	Complete Genome	TIGR	SAMN02604004	GCA_000147095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/095/GCA_000147095.1_ASM14709v1	-	670-6B
Streptococcus pneumoniae INV200	869216	PRJNA50731	50731	Terrabacteria group	Firmicutes	2.09332	39.6	chromosome:NC_017593.1/FQ312029.1	-	1	2264	2006	7/29/10	3/9/17	Complete Genome	The Wellcome Trust Sanger Institute	SAMEA3138386	GCA_000210935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/935/GCA_000210935.1_ASM21093v1	-	INV200
Leptospira interrogans serovar Bulgarica str. Mallika	1001586	PRJNA65041	65041	Spirochaetes	Spirochaetia	4.66122	35	-	AFLS02	41	4188	3772	6/7/11	5/19/17	Contig	J. Craig Venter Institute	SAMN02436546	GCA_000216375.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/375/GCA_000216375.3_LintsBulMalv1.0	-	Mallika
Actinobacillus pleuropneumoniae	715	PRJNA266367	266367	Proteobacteria	Gammaproteobacteria	2.27554	41.1	-	JSVZ01	48	2212	1836	1/12/15	4/2/17	Contig	LNCC	SAMN03162175	GCA_000817485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/485/GCA_000817485.1_ASM81748v1	25745011	518
Streptococcus pneumoniae INV104	869269	PRJNA50735	50735	Terrabacteria group	Firmicutes	2.14212	39.6	chromosome:NC_017591.1/FQ312030.1	-	1	2347	2065	7/29/10	3/9/17	Complete Genome	The Wellcome Trust Sanger Institute	SAMEA3138388	GCA_000210975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/975/GCA_000210975.1_ASM21097v1	-	INV104
Xylella fastidiosa subsp. multiplex Griffin-1	1343737	PRJNA207361	207361	Proteobacteria	Gammaproteobacteria	2.38731	51.7	-	AVGA01	84	2271	1931	9/12/13	4/11/17	Contig	USDA	SAMN02472062	GCA_000466025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/025/GCA_000466025.1_Red_Oak_Large_Contigs	24115539	Griffin-1
Streptococcus pneumoniae SPN032672	869311	PRJNA50809	50809	Terrabacteria group	Firmicutes	2.13119	39.6	chromosome:NC_021003.1/FQ312039.1	-	1	2362	2069	7/29/10	3/9/17	Complete Genome	Wellcome Trust Sanger Institute	SAMEA3138393	GCA_000211075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/211/075/GCA_000211075.1_ASM21107v1	-	SPN032672
Streptococcus pneumoniae SPN033038	869312	PRJNA50811	50811	Terrabacteria group	Firmicutes	2.1335	39.6	chromosome:NC_021004.1/FQ312042.1	-	1	2365	2063	7/29/10	3/9/17	Complete Genome	Wellcome Trust Sanger Institute	SAMEA3138394	GCA_000211095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/211/095/GCA_000211095.1_ASM21109v1	-	SPN033038
Shigella flexneri 2a str. 2457T	198215	PRJNA48255	48255	Proteobacteria	Gammaproteobacteria	4.8255	50.7	-	ADUV01	71	5286	4391	12/6/10	8/4/17	Contig	Institute for Genome Sciences	SAMN00792433	GCA_000183785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/785/GCA_000183785.2_ASM18378v2	-	2457T
Agrobacterium tumefaciens	358	PRJNA246040	246040	Proteobacteria	Alphaproteobacteria	5.61503	59	-	JMKN01	39	5507	5349	7/18/14	4/2/17	Contig	University of Malaya	SAMN02742263	GCA_000730975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/975/GCA_000730975.1_ASM73097v1	-	LBA4404
Fusobacterium nucleatum subsp. animalis 11_3_2	457403	PRJNA39559	39559	Fusobacteria	Fusobacteriia	2.72102	27.1	-	ACUO01	37	2695	2397	6/15/11	3/30/17	Scaffold	Broad Institute	SAMN02595348	GCA_000218655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/655/GCA_000218655.1_Fusobacterium_sp_11_3_2_V1	-	11_3_2
Bifidobacterium longum subsp. longum F8	722911	PRJNA45963	45963	Terrabacteria group	Actinobacteria	2.38499	59.9	chromosome:NC_021008.1/FP929034.1	-	1	2088	1929	3/25/10	3/30/17	Chromosome	metaHIT	SAMEA3138379	GCA_000210755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/755/GCA_000210755.1_ASM21075v1	-	F8
Haemophilus parainfluenzae T3T1	862965	PRJNA50411	50411	Proteobacteria	Gammaproteobacteria	2.08688	39.6	chromosome:NC_015964.1/FQ312002.1	-	1	2056	1948	7/23/10	3/30/17	Complete Genome	The Wellcome Trust Sanger Institute	SAMEA3138384	GCA_000210895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/895/GCA_000210895.1_ASM21089v1	-	T3T1
Capnocytophaga ochracea DSM 7271	521097	PRJNA29403	29403	FCB group	Bacteroidetes/Chlorobi group	2.61293	39.6	chromosome:NC_013162.1/CP001632.1	-	1	2322	2183	8/26/09	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00001911	GCA_000023285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/285/GCA_000023285.1_ASM2328v1	21304645	DSM 7271
Streptococcus dysgalactiae subsp. equisimilis GGS_124	486410	PRJDA27849	27849	Terrabacteria group	Firmicutes	2.10634	39.6	chromosome 1:NC_012891.1/AP010935.1	-	1	2133	1957	7/1/09	5/10/17	Complete Genome	"Research Institute, International Medical Center of Japan"	SAMD00060937	GCA_000010705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/705/GCA_000010705.1_ASM1070v1	21223537	GGS_124
Streptococcus pneumoniae Hungary19A-6	487214	PRJNA28035	28035	Terrabacteria group	Firmicutes	2.24561	39.6	chromosome:NC_010380.1/CP000936.1	-	1	2429	2167	2/27/08	3/15/17	Complete Genome	J. Craig Venter Institute	SAMN02603442	GCA_000019265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/265/GCA_000019265.1_ASM1926v1	-	Hungary19A-6
Pseudomonas syringae pv. aceris str. M302273	629270	PRJNA33225	33225	Proteobacteria	Gammaproteobacteria	6.25057	58.9	-	AEAO01	511	5810	5100	7/8/10	5/19/17	Scaffold	University of North Carolina at Chapel Hill	SAMN02471316	GCA_000145925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/925/GCA_000145925.1_ASM14592v1	21799664	M302273
Vibrio vulnificus BAA87	1437872	PRJNA232047	232047	Proteobacteria	Gammaproteobacteria	5.13549	46.5	-	JDSE01	218	4773	4187	2/20/14	4/11/17	Contig	Northwestern University	SAMN02645177	GCA_000576265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/265/GCA_000576265.1_BAA87	24652973	BAA87
Histophilus somni	731	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.14875	37.2	-	LQGL01	45	1984	1865	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366585	GCA_001931095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/095/GCA_001931095.1_ASM193109v1	-	3874HS
Bacillus licheniformis CG-B52	1368424	PRJNA213157	213157	Terrabacteria group	Firmicutes	4.39655	45.7	-	AVEZ01	50	4648	4419	8/23/13	4/2/17	Contig	Corporacion CorpoGen	SAMN02316555	GCA_000477395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/395/GCA_000477395.1_CGB52	27174263	CG-B52
Virgibacillus sp. LM2416	2017483	PRJNA392609	392609	Terrabacteria group	Firmicutes	4.07121	39.5	chromosome:NZ_CP022315.1/CP022315.1	-	1	3965	3786	7/12/17	7/14/17	Complete Genome	Kyung Hee University	SAMN07303499	GCA_002216775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/775/GCA_002216775.1_ASM221677v1	-	LM2416
Shigella sonnei 09-4962	1212584	PRJNA171091	171091	Proteobacteria	Gammaproteobacteria	4.88342	51	-	AMKL01	86	5359	4405	1/6/15	8/8/17	Contig	Institute for Genome Sciences	SAMN03276478	GCA_000815925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/925/GCA_000815925.1_ASM81592v1	-	Sep-62
Bacteroides fragilis	817	PRJNA295908	295908	FCB group	Bacteroidetes/Chlorobi group	5.1755	43.4	-	LMAC01	14	4487	4168	7/26/16	4/5/17	Scaffold	Seqomics Ltd.	SAMN04093172	GCA_001693695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/695/GCA_001693695.1_ASM169369v1	27246231	O:21
Streptococcus thermophilus M17PTZA496	1433289	PRJNA230629	230629	Terrabacteria group	Firmicutes	2.06546	38.8696	chromosome:NZ_CM002372.1/CM002372.1	AZJT01	70	2274	1852	1/20/14	4/18/17	Chromosome	University of Padua	SAMN02437282	GCA_000521265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/265/GCA_000521265.1_M17PTZA496VE	24526643	M17PTZA496
Lactobacillus reuteri	1598	PRJNA248653	248653	Terrabacteria group	Firmicutes	1.9803	38.4	-	JOOG01	36	1915	1702	9/25/14	4/2/17	Contig	University of Alberta	SAMN02869572	GCA_000758185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/185/GCA_000758185.1_LTH5448	-	LTH5448
Burkholderia cenocepacia	95486	PRJNA243842	243842	Proteobacteria	Betaproteobacteria	7.97918	67.1	-	JJOA01	83	7399	7036	6/12/14	3/24/17	Scaffold	National Chung Hsing University	SAMN02720836	GCA_000705535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/535/GCA_000705535.1_BukCp6.0	-	869T2
Pelosinus fermentans JBW45	1192197	PRJNA166937	166937	Terrabacteria group	Firmicutes	5.38082	39.5	chromosome:NZ_CP010978.1/CP010978.1	-	1	4812	4578	3/2/15	4/10/17	Complete Genome	Oak Ridge National Laboratory	SAMN00996448	GCA_000271665.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/665/GCA_000271665.2_ASM27166v2	26404608	JBW45
Streptococcus dysgalactiae subsp. equisimilis AC-2713	759913	PRJNA48119	48119	Terrabacteria group	Firmicutes	2.17944	39.5	chromosome:NC_019042.1/HE858529.1	-	1	2134	1947	10/31/12	3/31/17	Complete Genome	DWI an der RWTH Aachen e. V.	SAMEA3138428	GCA_000317855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/855/GCA_000317855.1_ASM31785v1	-	AC-2713
Bacillus pumilus	1408	PRJNA270572	270572	Terrabacteria group	Firmicutes	3.68178	41.6	-	JXCO01	19	3793	3659	1/26/15	4/3/17	Scaffold	University of Groningen	SAMN03267272	GCA_000828425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/425/GCA_000828425.1_ASM82842v1	25767247	B4134
Streptococcus dysgalactiae subsp. equisimilis RE378	617121	PRJDA34711	34711	Terrabacteria group	Firmicutes	2.15115	39.5	chromosome:NC_018712.1/AP011114.1	-	1	2103	1896	10/3/12	3/30/17	Complete Genome	Kitasato University	SAMD00060962	GCA_000307185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/185/GCA_000307185.1_ASM30718v1	22900646	RE378
Streptococcus dysgalactiae subsp. equisimilis ATCC 12394	663954	PRJNA39783	39783	Terrabacteria group	Firmicutes	2.15949	39.5	chromosome:NC_017567.1/CP002215.1	-	1	2118	1887	2/10/11	3/30/17	Complete Genome	Cornell University	SAMN02603163	GCA_000188715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/715/GCA_000188715.1_ASM18871v1	21282711	ATCC 12394
Ralstonia solanacearum Rs-09-161	1394180	PRJNA217471	217471	Proteobacteria	Betaproteobacteria	5.75792	66.6865	chromosome:NZ_CM002757.1/CM002757.1; plasmid unnamed1 :NZ_CM002758.1/CM002758.1	JHBO01	75	5143	4812	4/21/14	4/10/17	Chromosome	ICAR Research Complex for Goa	SAMN02444146	GCA_000671335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/335/GCA_000671335.1_RALSO161-G1	24874667	Rs-09-161
Corynebacterium jeikeium	38289	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.53788	59	-	JVPT01	83	2235	2121	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197405	GCA_001055915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/915/GCA_001055915.1_ASM105591v1	26230489	212_CJEI
Candidatus Pelagibacter ubique	198252	PRJEB9287	287342	Proteobacteria	Alphaproteobacteria	0.860157	29.4	-	CVSO01	80	956	875	6/17/15	4/10/17	Contig	UNIVERSITY OF CALIFORNIA - SAN DIEGO	SAMEA3368566	GCA_001180105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/105/GCA_001180105.1_CLC_assembled_contigs	-	SCGC AAA795-M22
Streptococcus pneumoniae AP200	574093	PRJNA32641	32641	Terrabacteria group	Firmicutes	2.13058	39.5	chromosome:NC_014494.1/CP002121.1	-	1	2327	2067	9/7/10	3/22/17	Complete Genome	"Istituto di Teconologie Biomediche, Consiglio Nazionale delle Ricerche"	SAMN02603428	GCA_000146975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/146/975/GCA_000146975.1_ASM14697v1	-	AP200
Clostridioides difficile QCD-23m63	499174	PRJNA28557	28557	Terrabacteria group	Firmicutes	3.94028	28.5848	chromosome:NZ_CM000660.1/CM000660.1	ABKL02	20	3607	3335	2/12/08	3/15/17	Chromosome	McGill University	SAMN02470540	GCA_000155065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/065/GCA_000155065.1_ASM15506v1	-	QCD-23m63
Shigella boydii	621	PRJNA288167	288167	Proteobacteria	Gammaproteobacteria	4.52928	50.5	-	LPTO01	367	5115	4271	12/15/16	3/5/17	Contig	"University of Maryland, School of Medicine"	SAMN04001692	GCA_001905965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/965/GCA_001905965.1_ASM190596v1	-	600746
Streptococcus salivarius	1304	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.21753	39.7	-	JVWD01	115	2060	1949	7/10/15	4/3/17	Contig	University of Washington	SAMN03197239	GCA_001069445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/445/GCA_001069445.1_ASM106944v1	26230489	1270_SSAL
Streptococcus pneumoniae ATCC 700669	561276	PRJEA31233	31233	Terrabacteria group	Firmicutes	2.22132	39.5	chromosome:NC_011900.1/FM211187.1	-	1	2403	2150	1/13/09	3/15/17	Complete Genome	Wellcome Trust Sanger Institute	SAMEA1705947	GCA_000026665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/665/GCA_000026665.1_ASM2666v1	19114491	ATCC 700669
Brucella abortus	235	PRJNA400357	400357	Proteobacteria	Alphaproteobacteria	3.32489	57.0388	chromosome 1:CP023219.1; chromosome 2:CP023220.1	-	2	3363	2955	9/12/17	9/12/17	Chromosome	IZSM-Portici	SAMN07572673	GCA_002290685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/685/GCA_002290685.1_ASM229068v1	-	49839
Yersinia pseudotuberculosis B-6865	1286088	PRJEB1341	187436	Proteobacteria	Gammaproteobacteria	4.27415	47.5	-	CAQX01	240	3908	3631	2/20/13	5/19/17	Contig	UPSUD	SAMEA2272757	GCA_000344035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/035/GCA_000344035.1_ASM34403v1	23580708	B-6865
Lactobacillus delbrueckii subsp. lactis DSM 20072	888027	PRJNA53001	53001	Terrabacteria group	Firmicutes	2.07108	49.7	-	AEXU01	26	1943	1691	3/10/11	3/30/17	Scaffold	Baylor College of Medicine	SAMN00253996	GCA_000192165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/165/GCA_000192165.1_ASM19216v1	-	DSM 20072
Leptospira borgpetersenii serovar Hardjo-bovis str. Lely 607	1291206	PRJNA188978	188978	Spirochaetes	Spirochaetia	3.77417	40.3	-	AOWM01	198	3717	3155	3/1/13	4/1/17	Contig	J. Craig Venter Institute	SAMN01919805	GCA_000342885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/885/GCA_000342885.1_CA_glsol060	-	Lely 607
Streptococcus pneumoniae CGSP14	516950	PRJNA29179	29179	Terrabacteria group	Firmicutes	2.2092	39.5	chromosome:NC_010582.1/CP001033.1	-	1	2380	2112	4/11/08	3/8/17	Complete Genome	Beijing Institute of Genomics	SAMN02603015	GCA_000019985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/985/GCA_000019985.1_ASM1998v1	19361343	CGSP14
Campylobacter fetus subsp. testudinum	1507806	PRJNA282782	282782	Proteobacteria	delta/epsilon subdivisions	1.77944	33	-	LFMJ01	59	1774	1712	8/5/16	4/5/17	Contig	Utrecht University	SAMN03579565	GCA_001699125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/125/GCA_001699125.1_ASM169912v1	27333878	11S02557-2
Proteus mirabilis	584	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	4.21698	39.4682	chromosome:NZ_CP021550.1/CP021550.1; plasmid tig00000137:NZ_CP021551.1/CP021551.1	-	2	3944	3762	6/8/17	6/10/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04015000	GCA_002180115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/115/GCA_002180115.1_ASM218011v1	-	AR_0159
Oenococcus oeni IOEB_0501	1428411	PRJNA229527	229527	Terrabacteria group	Firmicutes	1.82636	37.9	-	AZIP01	38	1862	1616	7/2/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02900468	GCA_000721875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/875/GCA_000721875.1_Oeoe_IOEB_0501_1.0	24901216	IOEB_0501
Streptococcus mitis SPAR10	1159208	PRJNA89127	89127	Terrabacteria group	Firmicutes	1.75865	39.4	-	ALCH01	10	1768	1635	7/18/12	3/30/17	Contig	Institute for Genome Sciences	SAMN00811524	GCA_000279535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/535/GCA_000279535.1_ASM27953v1	-	SPAR10
Aeromonas salmonicida subsp. salmonicida	29491	PRJNA264317	264317	Proteobacteria	Gammaproteobacteria	5.02109	58.3	-	JRYW01	126	4905	4393	11/25/14	4/2/17	Contig	Universite Laval	SAMN03120845	GCA_000786805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/805/GCA_000786805.1_ASM78680v1	-	2004-05MF26
Vibrio parahaemolyticus	670	PRJNA352377	352377	Proteobacteria	Gammaproteobacteria	4.708	45.764	chromosome 1:NZ_CP019059.1/CP019059.1; chromosome 2:NZ_CP019060.1/CP019060.1	-	2	4498	4231	1/13/17	4/10/17	Chromosome	Cefas	SAMN05977307	GCA_001951115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/115/GCA_001951115.1_ASM195111v1	-	1682
Proteus mirabilis	584	PRJNA292902	292902	Proteobacteria	Gammaproteobacteria	4.44047	39.4607	chromosome:NZ_CP021852.1/CP021852.1; plasmid unitig_1:NZ_CP021853.1/CP021853.1; plasmid unitig_2:NZ_CP021854.1/CP021854.1; plasmid unitig_3:NZ_CP021855.1/CP021855.1	-	4	4236	4046	6/16/17	6/21/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014997	GCA_002197405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/405/GCA_002197405.1_ASM219740v1	-	AR_0156
Coxiella burnetii	777	PRJNA394747	394747	Proteobacteria	Gammaproteobacteria	2.00623	42.5	-	NOLU01	34	2194	1995	8/11/17	8/15/17	Scaffold	National Institutes of Health	SAMN07349488	GCA_002247305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/305/GCA_002247305.1_ASM224730v1	-	California 16 RSA350
Lactobacillus casei T71499	1051658	PRJNA68471	68471	Terrabacteria group	Firmicutes	3.00005	46.2	-	AFYP01	55	3120	2824	11/2/12	3/30/17	Contig	University of Wisconsin-Madison and Utah State University	SAMN02472001	GCA_000309685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/685/GCA_000309685.1_ASM30968v1	23035691	T71499
Salinispora arenicola CNR107	1169167	PRJNA182422	182422	Terrabacteria group	Actinobacteria	5.76741	69.6	-	ARKT01	48	5220	4914	4/22/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02441666	GCA_000378685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/685/GCA_000378685.1_ASM37868v1	-	CNR107
Lactobacillus helveticus	1587	PRJNA263142	263142	Terrabacteria group	Firmicutes	1.859	36.8	-	JRTS01	296	1899	1587	10/10/14	4/2/17	Contig	Consiglio per la Ricerca e la Sperimentazione in Agricoltura	SAMN03097255	GCA_000765455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/455/GCA_000765455.1_ASM76545v1	-	M3
Vibrio harveyi	669	PRJNA257174	257174	Proteobacteria	Gammaproteobacteria	5.45693	45.1	-	JPTK01	1626	5414	4629	7/22/15	4/3/17	Contig	Naval Research Laboratory	SAMN02948019	GCA_001185545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/545/GCA_001185545.1_ASM118554v1	-	2415-05
Bifidobacterium adolescentis	1680	PRJNA300965	300965	Terrabacteria group	Actinobacteria	2.37281	59.3	-	LNKE01	33	2119	1932	4/24/17	4/26/17	Contig	University of Parma	SAMN04231311	GCA_002108035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/035/GCA_002108035.1_Bado703Bv1	27035119	703B
Lactococcus garvieae	1363	PRJNA380338	380338	Terrabacteria group	Firmicutes	2.03895	38	-	NBBK01	25	1998	1912	4/3/17	4/5/17	Contig	Yeditepe University	SAMN06640869	GCA_002077975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/975/GCA_002077975.1_ASM207797v1	-	A1
Sulfolobus islandicus M.16.30	1132502	PRJNA80899	80899	TACK group	Crenarchaeota	2.60831	35.1	-	AHJP01	4	2852	2559	1/25/12	3/30/17	Contig	University of Illinois	SAMN02471824	GCA_000245195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/195/GCA_000245195.2_ASM24519v2	22363207	M.16.30
Lactobacillus fermentum	1613	PRJNA279953	279953	Terrabacteria group	Firmicutes	1.82966	51.6	-	LBDG01	55	1886	1666	5/18/15	4/3/17	Contig	Federal State Scientific-Industrial Company MICROGEN	SAMN03452287	GCA_001010185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/185/GCA_001010185.1_ASM101018v1	-	39
Legionella clemsonensis	1867846	PRJNA326348	326348	Proteobacteria	Gammaproteobacteria	3.2721	39.4	chromosome:NZ_CP016397.1/CP016397.1	-	1	2930	2785	8/2/17	8/4/17	Complete Genome	Clemson University	SAMN05254214	GCA_002240035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/035/GCA_002240035.1_ASM224003v1	-	CDC-D5610
Porphyromonas gingivalis	837	PRJNA305025	305025	FCB group	Bacteroidetes/Chlorobi group	2.37345	48.3	-	LOEL01	92	2159	1935	2/9/16	4/4/17	Contig	University of Washington	SAMN04309157	GCA_001553795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/795/GCA_001553795.1_ASM155379v1	27056232	MP4-504
Aliivibrio fischeri	668	PRJNA318805	318805	Proteobacteria	Gammaproteobacteria	4.3431	38.4	-	MAJN01	83	4036	3916	7/21/16	4/5/17	Scaffold	Massachusetts Institute of Technology	SAMN04867940	GCA_001690915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/915/GCA_001690915.1_ASM169091v1	-	5F97
Burkholderia thailandensis Phuket 4W-1	1249666	PRJNA178708	178708	Proteobacteria	Betaproteobacteria	6.67504	67.7	-	AQQJ01	2	6398	5871	2/18/15	4/3/17	Scaffold	Los Alamos National Laboratory	SAMN02697974	GCA_000877335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/335/GCA_000877335.1_BTP	25931592	Phuket 4W-1
Candidatus Micrarchaeota archaeon Mia14	1920749	PRJNA353339	353339	DPANN group	Candidatus Micrarchaeota	0.952257	39.4	chromosome:NZ_CP019964.1/CP019964.1	-	1	1009	960	7/3/17	7/5/17	Complete Genome	Immanuel Kant Baltic Federal University	SAMN06014021	GCA_002214165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/165/GCA_002214165.1_ASM221416v1	-	Mia14
Burkholderia multivorans	87883	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.44681	67.4	-	LPBX01	71	6133	5851	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449386	GCA_001528045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/045/GCA_001528045.1_ASM152804v1	-	MSMB2008WGS
Borrelia burgdorferi CA8	747491	PRJNA46689	46689	Spirochaetes	Spirochaetia	0.90313	28.5	-	ADMY01	7	862	811	4/25/13	4/1/17	Contig	"University of California, Irvine"	SAMN02471616	GCA_000382565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/565/GCA_000382565.1_ASM38256v1	-	CA8
Treponema pallidum subsp. pallidum	161	PRJNA271237	271237	Spirochaetes	Spirochaetia	1.14006	52.8	chromosome:NZ_CP010564.1/CP010564.1	-	1	1065	1002	6/3/16	4/5/17	Chromosome	University of Washington	SAMN03273357	GCA_001655475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/475/GCA_001655475.1_ASM165547v1	-	UW228B
Rhizobium leguminosarum bv. viciae VF39	1041145	PRJNA163011	163011	Proteobacteria	Alphaproteobacteria	7.6474	60.8	-	ATYQ01	89	7530	7107	7/15/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02441560	GCA_000427765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/765/GCA_000427765.1_ASM42776v1	-	VF39
Clavibacter michiganensis	28447	PRJNA338487	338487	Terrabacteria group	Actinobacteria	3.02415	73.5	-	MDJZ01	18	2891	2788	5/19/17	5/24/17	Contig	University of California	SAMN05559657	GCA_002151125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/125/GCA_002151125.1_ASM215112v1	-	CFBP8019
Brucella canis	36855	PRJNA328097	328097	Proteobacteria	Alphaproteobacteria	3.2645	57.3	-	MAXW01	12	3326	3115	10/12/16	4/5/17	Contig	Uppsala University	SAMN05363686	GCA_001758265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/265/GCA_001758265.1_ASM175826v1	-	SVA10
Brucella suis bv. 4 str. 40	520488	PRJNA34745	34745	Proteobacteria	Alphaproteobacteria	3.30726	57.2	-	ACJK01	12	3320	3134	9/18/09	3/30/17	Scaffold	Broad Institute	SAMN02595310	GCA_000160275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/275/GCA_000160275.1_ASM16027v1	-	40
Enterococcus faecalis	1351	PRJNA289613	289613	Terrabacteria group	Firmicutes	3.02565	37.2	chromosome:NZ_CP022712.1/CP022712.1	-	1	3030	2816	8/9/17	8/17/17	Chromosome	Max von Pettenkofer-Institut	SAMN03856105	GCA_002221625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/625/GCA_002221625.2_ASM222162v2	-	KB1
Bradyrhizobium japonicum is5	1304879	PRJNA195877	195877	Proteobacteria	Alphaproteobacteria	7.58879	63.8	-	ATWP01	60	7257	6929	7/9/13	4/1/17	Contig	DOE Joint Genome Institute	SAMN02440582	GCA_000421305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/305/GCA_000421305.1_ASM42130v1	-	is5
Microcystis aeruginosa NIES-44	449439	PRJDB3151	267096	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.56532	43.2	-	BBPA01	79	4480	4053	11/12/14	4/2/17	Contig	Akita Prefectural University	SAMD00020207	GCA_000787675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/675/GCA_000787675.1_ASM78767v1	25792056	NIES-44
Methanobrevibacter smithii TS95D	911132	PRJNA59681	59681	Euryarchaeota	Methanobacteria	2.01168	30.3	-	AEMA01	58	1880	1767	2/17/11	3/30/17	Contig	Washington University in St.Louis	SAMN02436670	GCA_000190115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/115/GCA_000190115.2_ASM19011v2	21317366	TS95D
Streptococcus dysgalactiae subsp. equisimilis	119602	PRJNA327242	327242	Terrabacteria group	Firmicutes	2.21493	39.2	-	MATX01	62	2204	2037	7/9/16	4/5/17	Contig	The UT MD Anderson Cancer Center	SAMN05327339	GCA_001682825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/825/GCA_001682825.1_ASM168282v1	-	UT_4234_DH
Borrelia garinii IPT108	1408841	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.23845	27.9	-	AYAQ01	67	1230	816	12/3/13	4/2/17	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378808	GCA_000501735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/735/GCA_000501735.1_BorGarIPT108	-	IPT108
Streptococcus mutans TCI-146	1074124	PRJNA71999	71999	Terrabacteria group	Firmicutes	1.78549	37	-	AGKE01	143	1806	1682	10/6/11	3/22/17	Contig	JCVI	SAMN02436345	GCA_000228965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/965/GCA_000228965.2_SMUT4-NEX_21-146	-	TCI-146
Neisseria gonorrhoeae FA6140	528353	PRJNA32791	32791	Proteobacteria	Betaproteobacteria	2.12514	52.5	-	ABZI01	55	2337	2089	12/15/08	4/11/17	Scaffold	Broad Institute	SAMN02595241	GCA_000156815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/815/GCA_000156815.1_ASM15681v1	-	FA6140
Proteus mirabilis	584	PRJNA318385	318385	Proteobacteria	Gammaproteobacteria	4.27243	39.4	chromosome:NZ_CP015347.1/CP015347.1	-	1	4123	3882	5/9/16	4/5/17	Complete Genome	University of Siena	SAMN04849770	GCA_001640985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/985/GCA_001640985.1_ASM164098v1	27340072	AOUC-001
Chlamydia psittaci 02DC16	1112255	PRJNA77083	77083	PVC group	Chlamydiae	1.1806	39	-	ATKR01	3	1048	990	6/25/13	4/4/17	Scaffold	University of Maryland School of Medicine	SAMN00860206	GCA_000415565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/565/GCA_000415565.2_ASM41556v2	-	02DC16
Bifidobacterium animalis subsp. lactis BS 01	911598	PRJNA59607	59607	Terrabacteria group	Actinobacteria	1.9326	60.5	-	AHGW01	2	1650	1571	12/30/11	3/30/17	Scaffold	Probiotical Spa	SAMN00764905	GCA_000240765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/765/GCA_000240765.1_BifAniBS01_1.0	-	BS 01
Aerococcus viridans	1377	PRJNA308559	308559	Terrabacteria group	Firmicutes	2.19988	39.4	chromosome:NZ_CP014164.1/CP014164.1	-	1	2082	1911	2/1/16	4/11/17	Complete Genome	"Department of Clinical Microbiology, Slagelse Hospital, Denmark"	SAMN04419116	GCA_001543285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/285/GCA_001543285.1_ASM154328v1	27103727	CCUG4311
Stenotrophomonas maltophilia S028	1210005	PRJNA173046	173046	Proteobacteria	Gammaproteobacteria	3.75475	67.1	-	ALYK02	297	3508	3197	9/10/12	4/11/17	Contig	"307 Hospital, Academy of Military Medical Science"	SAMN02469568	GCA_000295735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/735/GCA_000295735.2_ASM29573v2	23144428	S028
Comamonas testosteroni	285	PRJNA270289	270289	Proteobacteria	Betaproteobacteria	5.23216	61.6	-	JWJW01	65	4799	4645	1/2/15	4/3/17	Contig	University of Malaya	SAMN03265419	GCA_000813605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/605/GCA_000813605.1_ASM81360v1	-	R17B
Bacillus mycoides	1405	PRJNA356815	356815	Terrabacteria group	Firmicutes	5.74747	35.1	-	MRWW01	73	6154	5728	5/5/17	6/15/17	Contig	University of Groningen	SAMN06127749	GCA_002118185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/118/185/GCA_002118185.1_ASM211818v1	-	EC18
Yersinia frederiksenii	29484	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.87894	46.8	-	CPVN01	36	4492	4268	3/22/15	4/3/17	Scaffold	SC	SAMEA859965	GCA_001158365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/365/GCA_001158365.1_5139_5_1	-	FE80151
Bifidobacterium bifidum	1681	PRJNA263318	263318	Terrabacteria group	Actinobacteria	2.23853	62.9	-	JSDZ01	17	1967	1765	6/5/15	4/3/17	Contig	University of Parma	SAMN03097404	GCA_001020335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/335/GCA_001020335.1_Bbif08v4	25523018	LMG 11583
Alteromonas macleodii	28108	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	2.55069	44.6	-	LUNL01	490	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534561	GCA_001626355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/355/GCA_001626355.1_ASM162635v1	27377622	-
Micrococcus luteus	1270	PRJNA379934	379934	Terrabacteria group	Actinobacteria	2.41196	73.1	-	NAQZ01	126	2279	2124	4/12/17	4/16/17	Scaffold	Loyola University Chicago	SAMN06624127	GCA_002088075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/075/GCA_002088075.1_ASM208807v1	-	ATCC 12698
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.11992	41.2	-	CVXJ01	74	2057	1879	6/23/15	3/26/17	Contig	SC	SAMEA1032754	GCA_001175105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/105/GCA_001175105.1_6817_1_55	-	EQUI0008
Haemophilus parasuis HPS9	1450513	PRJNA235354	235354	Proteobacteria	Gammaproteobacteria	2.1914	39.8	-	JDSN01	209	2223	1978	5/12/14	4/2/17	Contig	"Newport Laboratories, A Sanofi company"	SAMN02769535	GCA_000688855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/855/GCA_000688855.1_HparHPS9v1.0	25189591	HPS9
Pasteurella multocida subsp. gallicida X73	1169410	PRJNA155371	155371	Proteobacteria	Gammaproteobacteria	2.2668	40.3	chromosome:NZ_CM001580.1/CM001580.1	AMBP01	1	4258	4127	9/13/12	3/30/17	Chromosome	none	SAMN02470584	GCA_000298655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/655/GCA_000298655.1_X73v1	23405337	X73
Lactobacillus rhamnosus	47715	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.00479	46.7	-	JUTS01	167	3005	2827	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197978	GCA_001067215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/215/GCA_001067215.1_ASM106721v1	26230489	769_LRHA
Acetobacter pasteurianus	438	PRJNA321937	321937	Proteobacteria	Alphaproteobacteria	3.21	52.8	-	LYUD01	184	3140	2823	6/15/16	4/5/17	Contig	Microbial Institue for Fermentation Industry	SAMN05162507	GCA_001662905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/905/GCA_001662905.1_ASM166290v1	-	SRCM100623
Vibrio splendidus 5S-101	617148	PRJNA167013	167013	Proteobacteria	Gammaproteobacteria	5.45822	44.2	-	AJZG02	40	4789	4581	6/25/12	4/5/17	Scaffold	Broad Institute	SAMN02470477	GCA_000272245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/245/GCA_000272245.2_ASM27224v2	22955834	5S-101
Aerococcus urinaeequi	51665	PRJNA308559	308559	Terrabacteria group	Firmicutes	2.01334	39.4	chromosome:NZ_CP014162.1/CP014162.1	-	1	1866	1769	2/1/16	4/11/17	Complete Genome	"Department of Clinical Microbiology, Slagelse Hospital, Denmark"	SAMN04419114	GCA_001543205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/205/GCA_001543205.1_ASM154320v1	27103727	CCUG28094
Enterococcus casseliflavus	37734	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.93139	42.4	-	DDAE01	17	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457243	GCA_002333215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/215/GCA_002333215.1_ASM233321v1	28894102	-
Bacillus megaterium	1404	PRJNA348753	348753	Terrabacteria group	Firmicutes	4.83642	38	-	DFVC01	97	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454261	GCA_002379935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/935/GCA_002379935.1_ASM237993v1	28894102	-
Clostridium sporogenes	1509	PRJNA278445	278445	Terrabacteria group	Firmicutes	3.92955	28.0114	plasmid unnamed1:NZ_CM007812.1/CM007812.1; plasmid unnamed2:NZ_CM007813.1/CM007813.1	LKKY02	35	3767	3478	11/17/15	4/5/17	Contig	Illinois Institute of Technology	SAMN03418524	GCA_001444695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/695/GCA_001444695.2_ASM144469v2	26519392	PA 3679
Aerococcus urinaeequi	51665	PRJNA281531	281531	Terrabacteria group	Firmicutes	2.05433	39.4	chromosome:NZ_CP013988.1/CP013988.1	-	1	1913	1812	1/20/16	4/11/17	Complete Genome	USDA-ARS-USMARC	SAMN04158504	GCA_001518795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/795/GCA_001518795.1_ASM151879v1	-	USDA-ARS-USMARC-56713
Bacteroides uniformis	820	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.12146	46.6	-	DCJR01	58	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453410	GCA_002320565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/565/GCA_002320565.1_ASM232056v1	28894102	-
Bordetella bronchiseptica 345	1331250	PRJNA202193	202193	Proteobacteria	Betaproteobacteria	5.2865	68.3	-	JGWJ01	79	5008	4878	5/1/14	4/2/17	Contig	JCVI	SAMN02263907	GCA_000662335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/335/GCA_000662335.1_gbb54v01	25908122	345
Colwellia sp. MT41	58049	PRJNA29235	29235	Proteobacteria	Gammaproteobacteria	4.33795	39.4	chromosome:NZ_CP013145.1/CP013145.1	-	1	3735	3520	11/17/15	4/16/17	Complete Genome	J. Craig Venter Institute	SAMN04255090	GCA_001444365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/365/GCA_001444365.1_ASM144436v1	-	MT41
Mesorhizobium loti	381	PRJNA399611	399611	Proteobacteria	Alphaproteobacteria	6.83521	62.8	-	NSFP01	62	6672	6286	9/12/17	9/14/17	Contig	Curtin University	SAMN07540855	GCA_002294835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/835/GCA_002294835.1_ASM229483v1	-	R7ANSxAA22
Corynebacterium diphtheriae DSM 43988	1206106	PRJNA169861	169861	Terrabacteria group	Actinobacteria	2.14174	53.3	-	AUZN01	140	2172	1854	8/28/13	4/10/17	Contig	"University of Strathclyde, Glasgow, UK"	SAMN02471956	GCA_000455785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/785/GCA_000455785.1_ASM45578v1	24200588	DSM 43988
[Haemophilus] ducreyi	730	PRJNA270894	270894	Proteobacteria	Gammaproteobacteria	1.65268	38.2	chromosome:CP011220.1	-	1	1611	1450	6/30/15	7/23/15	Chromosome	Indiana University School of Medicine	SAMN03271819	GCA_001043235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/235/GCA_001043235.1_ASM104323v1	-	CLU3
Streptococcus gordonii	1302	PRJNA280683	280683	Terrabacteria group	Firmicutes	2.20267	40.4	-	LAWN01	46	2132	2026	3/11/16	4/5/17	Contig	University of Malaya	SAMN03480700	GCA_001589035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/589/035/GCA_001589035.1_ASM158903v1	-	PK488
Sediminicola sp. YIK13	1453352	PRJNA271050	271050	FCB group	Bacteroidetes/Chlorobi group	3.56981	39.4	chromosome:NZ_CP010535.1/CP010535.1	-	1	3175	3108	11/3/15	4/11/17	Complete Genome	Korea Institute of Ocean Science and Technology	SAMN03272543	GCA_001430825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/430/825/GCA_001430825.1_ASM143082v1	26823585	YIK13
Yersinia enterocolitica	630	PRJNA243536	243536	Proteobacteria	Gammaproteobacteria	4.6458	47.3	-	JPDU01	2	4399	4111	9/16/14	3/24/17	Scaffold	Los Alamos National Laboratory	SAMN02887299	GCA_000755045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/045/GCA_000755045.1_YEF	25342679	YEF
Lactobacillus gasseri	1596	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.79293	34.9	-	JUTQ01	40	1731	1653	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197980	GCA_001066235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/235/GCA_001066235.1_ASM106623v1	26230489	770_LJOH
Moritella viscosa	80854	PRJEB6964	262769	Proteobacteria	Gammaproteobacteria	5.09399	39.3912	chromosome 1:NZ_LN554852.1/LN554852.1; plasmid pMVIS39:NZ_LN554854.1/LN554854.1; plasmid pMVIS41:NZ_LN554853.1/LN554853.1	-	3	4650	4301	9/30/14	4/11/17	Complete Genome	University of Tromso	SAMEA2735902	GCA_000953735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/735/GCA_000953735.1_MVIS1	-	-
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.08497	41.6	-	JJQH01	205	3536	3294	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708968	GCA_000979175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/175/GCA_000979175.1_gtlEnvA5udCFS	25756680	1.H.A.1A.3
Anaplasma phagocytophilum	948	PRJNA212450	212450	Proteobacteria	Alphaproteobacteria	1.49367	41.6	-	LASP01	4	1204	1081	4/2/15	4/3/17	Contig	IGS	SAMN02692926	GCA_000968465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/465/GCA_000968465.1_ASM96846v1	-	HGE1 mutant
Leuconostoc mesenteroides	1245	PRJDB4329	304146	Terrabacteria group	Firmicutes	2.00431	37.7	-	BCMP01	69	2022	1890	11/21/15	4/5/17	Contig	Kyushu University	SAMD00042709	GCA_001515385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/385/GCA_001515385.1_ASM151538v1	27013047	406
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.14134	39.9	-	FQTB01	1	1029	938	5/10/17	5/24/17	Contig	WTSI	SAMEA1094352	GCA_900118845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/845/GCA_900118845.1_7067_6_57	-	03DC34
Lactobacillus acidophilus	1579	PRJDB5198	347977	Terrabacteria group	Firmicutes	2.00951	34.6	-	BDHM01	25	1984	1852	10/8/16	4/6/17	Scaffold	"Division of Epigenomics and Development, Department of Molecular Genetics"	SAMD00064210	GCA_001950045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/045/GCA_001950045.1_ASM195004v1	-	L-55
Bartonella henselae	38323	PRJNA295147	295147	Proteobacteria	Alphaproteobacteria	1.86002	38	-	LOAF01	46	1709	1484	1/4/17	4/10/17	Contig	Anses UMR BIPAR	SAMN04286627	GCA_001932215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/215/GCA_001932215.1_ASM193221v1	-	A242
Planococcus sp. L10.15	1302659	PRJNA192562	192562	Terrabacteria group	Firmicutes	3.33007	39.3706	chromosome:NZ_CP016540.2/CP016540.2; plasmid pPS15-1:NZ_CP016541.2/CP016541.2; plasmid pPS15-2:NZ_CP016542.2/CP016542.2	-	3	3342	3134	7/20/16	4/16/17	Complete Genome	Universiti Malaya	SAMN02699419	GCA_001186155.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/155/GCA_001186155.3_ASM118615v3	-	L10.15
Chlamydia felis Fe/C-56	264202	PRJNA370	370	PVC group	Chlamydiae	1.17379	39.3646	chromosome:NC_007899.1/AP006861.1; plasmid pCfe1:NC_007900.1/AP006862.1	-	2	1032	974	3/10/06	4/17/17	Complete Genome	Japanese Consortium/Yamaguchi Univ.	SAMD00061108	GCA_000009945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/945/GCA_000009945.1_ASM994v1	16766509	Fe/C-56
Mannheimia haemolytica D35	1329905	PRJNA200973	200973	Proteobacteria	Gammaproteobacteria	2.49144	41.3	-	AUNK01	123	2516	2257	8/2/13	4/1/17	Contig	National Animal Disease Center	SAMN02116555	GCA_000443085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/085/GCA_000443085.1_MhD35v2	25767233	D35
Lactobacillus brevis	1580	PRJNA252105	252105	Terrabacteria group	Firmicutes	2.86422	45.4	-	JOKA01	103	2862	2763	1/5/15	4/3/17	Contig	Cornell University	SAMN02849429	GCA_000814725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/725/GCA_000814725.1_ASM81472v1	-	DmCS_003
Mycoplasma gallisepticum	2096	PRJNA325637	325637	Terrabacteria group	Tenericutes	0.941812	31.4	-	MATN01	82	788	672	7/12/16	4/5/17	Contig	University of Georgia	SAMN05277860	GCA_001683635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/635/GCA_001683635.1_ASM168363v1	-	K6222B
Campylobacter coli 76339	1367491	PRJEB4148	214875	Proteobacteria	delta/epsilon subdivisions	1.58449	31.9	chromosome I:NC_022132.1/HG326877.1	-	1	1580	1478	8/23/13	3/15/17	Chromosome	UH	SAMEA2272147	GCA_000470055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/055/GCA_000470055.1_3S	24524824	76339
Burkholderia sp. MSMB1588	1636423	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.89963	67.3453	chromosome 2:NZ_CM003770.1/CM003770.1	LNJS01	5	6660	6060	2/2/16	4/11/17	Chromosome	Northern Arizona University	SAMN03449293	GCA_001546925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/925/GCA_001546925.1_ASM154692v1	-	MSMB1588
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.71002	67.2	-	LOWT01	98	6124	5816	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449241	GCA_001524065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/065/GCA_001524065.1_ASM152406v1	-	FL-5-2-10-S2-D0
Cutibacterium acnes	1747	PRJNA277911	277911	Terrabacteria group	Actinobacteria	2.39974	60.1	chromosome:NZ_CP013693.1/CP013693.1	-	1	2399	2155	12/23/15	4/4/17	Chromosome	I.N. Blokhina Research Institute of Epidemiology and Microbiology	SAMN03398612	GCA_001481615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/615/GCA_001481615.1_ASM148161v1	-	4-Oct
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.62603	32.6	-	CUFY01	99	2591	2454	3/31/15	3/26/17	Contig	SC	SAMEA1035058	GCA_001225485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/485/GCA_001225485.1_7068_7_29	-	92271
Mycoplasma bovis	28903	PRJNA306895	306895	Terrabacteria group	Tenericutes	0.946134	29.3	-	LQDR01	75	821	736	1/4/17	4/6/17	Contig	"University of California, Davis"	SAMN04366513	GCA_001930175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/175/GCA_001930175.1_ASM193017v1	-	2335MB
Proteus mirabilis PR03	1279010	PRJNA185396	185396	Proteobacteria	Gammaproteobacteria	3.84761	38.6	-	AORN01	99	3523	3402	4/19/13	4/1/17	Contig	Universiti Teknologi MARA	SAMN02469777	GCA_000372565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/565/GCA_000372565.1_PM_version_1	23792750	PR03
Acinetobacter baumannii AYE	509173	PRJNA28921	28921	Proteobacteria	Gammaproteobacteria	4.04873	39.3357	chromosome:NC_010410.1/CU459141.1; plasmid p1ABAYE:NC_010401.1/CU459137.1; plasmid p2ABAYE:NC_010402.1/CU459138.1; plasmid p3ABAYE:NC_010404.1/CU459140.1; plasmid p4ABAYE:NC_010403.1/CU459139.1	-	5	3900	3703	2/26/08	3/15/17	Complete Genome	Genoscope	SAMEA3138279	GCA_000069245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/069/245/GCA_000069245.1_ASM6924v1	18350144	AYE
Cronobacter sakazakii	28141	PRJNA251816	251816	Proteobacteria	Gammaproteobacteria	4.53866	56.9	-	JOLQ01	98	4435	4198	10/9/15	4/4/17	Scaffold	"Nottingham Trent University, UK"	SAMN02840816	GCA_001309215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/215/GCA_001309215.1_ASM130921v1	26438044	691
Klebsiella oxytoca 10-5244	883119	PRJNA52141	52141	Proteobacteria	Gammaproteobacteria	6.29671	54.9	-	AGDK01	10	6098	5807	7/15/15	2/25/17	Scaffold	Broad Institute	SAMN00254035	GCA_001078195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/195/GCA_001078195.1_Kleb_oxyt_10-5244_V1	-	Oct-44
Clostridium beijerinckii	1520	PRJNA374573	374573	Terrabacteria group	Firmicutes	5.99294	29.6	-	MWMH01	28	5319	5103	3/2/17	3/4/17	Scaffold	Universidade de Sao Paulo	SAMN06328598	GCA_002009885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/885/GCA_002009885.1_ASM200988v1	-	Br21
Lactobacillus salivarius	1624	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.09004	32.7	-	NFHF01	76	2078	1909	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473764	GCA_002161265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/265/GCA_002161265.1_ASM216126v1	-	An84
Bacillus clausii	79880	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.7741	44.4	-	NPBS01	1137	4556	4399	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372693	GCA_002272645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/645/GCA_002272645.1_assembly-7523-2_v1	-	7523-2
Moraxella catarrhalis	480	PRJNA297370	297370	Proteobacteria	Gammaproteobacteria	1.9537	41.6	-	LXHS01	61	1856	1694	6/3/16	4/5/17	Contig	Drexel University College of Medicine	SAMN04122791	GCA_001656105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/105/GCA_001656105.1_ASM165610v1	26912404	F20
Streptococcus equinus	1335	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.31135	39.3166	chromosome:CP020438.1; plasmid unamed1:CP020439.1	-	2	2267	1999	3/29/17	3/29/17	Complete Genome	US Food and Drug Administration 	SAMN04875577	GCA_002073515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/515/GCA_002073515.1_ASM207351v1	-	FDAARGOS_251
Bifidobacterium breve DSM 20213 = JCM 1192	518634	PRJNA237576	237576	Terrabacteria group	Actinobacteria	2.25713	58.9	-	JDUD01	29	2027	1895	11/4/14	4/2/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442021	GCA_000771305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/305/GCA_000771305.1_DSM-20213	25658111	DSM 20213
Bacillus weihenstephanensis	86662	PRJNA288461	288461	Terrabacteria group	Firmicutes	6.06825	35.1	-	MUAI01	186	6273	5866	3/3/17	3/6/17	Contig	Cornell University	SAMN06242084	GCA_002014535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/535/GCA_002014535.1_ASM201453v1	-	FSL W7-1108
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.22141	36.7	-	LPRM01	6	2326	2222	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305147	GCA_001560135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/135/GCA_001560135.1_GG12_C01_13	-	GG12-C01-13
Streptococcus sanguinis SK355	888816	PRJNA53173	53173	Terrabacteria group	Firmicutes	2.37043	43.4	-	AFFN01	6	2336	2205	5/9/11	3/30/17	Scaffold	Baylor College of Medicine	SAMN00253324	GCA_000212855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/212/855/GCA_000212855.1_ASM21285v1	-	SK355
Staphylococcus saprophyticus	29385	PRJEB4141	221830	Terrabacteria group	Firmicutes	2.70874	33.3	-	FMPG01	41	2664	2527	9/30/16	4/5/17	Contig	SC	SAMEA2297795	GCA_900097965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/965/GCA_900097965.1_12075_1_88	-	82B
Vibrio sp. J2-26	1507978	PRJEB5895	284701	Proteobacteria	Gammaproteobacteria	5.41791	44.5	-	CCKI01	71	4742	4618	5/20/15	4/10/17	Scaffold	STATION BIOLOGIQUE DE ROSCOFF	SAMEA2594003	GCA_001262155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/155/GCA_001262155.1_VRSK26v1_PRJEB5895	-	J2-26
Bacillus coagulans	1398	PRJNA270593	270593	Terrabacteria group	Firmicutes	3.42452	46.5	-	LQYH01	124	3438	3210	3/11/16	4/5/17	Scaffold	University of Groningen	SAMN03267279	GCA_001587205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/205/GCA_001587205.1_B4100	27174261	B4100
Paenibacillus polymyxa	1406	PRJNA248065	248065	Terrabacteria group	Firmicutes	6.09911	45.3	-	JNCB01	23	5290	4958	7/29/14	4/2/17	Contig	CICC	SAMN02786346	GCA_000735775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/775/GCA_000735775.1_ASM73577v1	25169860	CICC 10580
Yersinia intermedia	631	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.95761	47.6	-	NHOH01	69	4685	4474	6/9/17	6/12/17	Scaffold	FDA/CFSAN	SAMN06330406	GCA_002188995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/995/GCA_002188995.1_ASM218899v1	-	CFSAN060537
Pseudomonas stutzeri T13	1210443	PRJNA170692	170692	Proteobacteria	Gammaproteobacteria	4.64894	63.9	-	ALJB01	71	4452	4300	7/30/12	5/19/17	Contig	Harbin Institute of Technology	SAMN02469872	GCA_000282955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/955/GCA_000282955.1_ASM28295v1	23012292	T13
Aeromonas hydrophila 187	1268077	PRJNA183199	183199	Proteobacteria	Gammaproteobacteria	4.78391	61.6	-	AOBO01	59	4459	4289	4/6/13	5/18/17	Contig	University of Malaya	SAMN02471855	GCA_000354635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/635/GCA_000354635.1_de_novo_assembly	25540357	187
Propionibacterium freudenreichii	1744	PRJEB6442	270206	Terrabacteria group	Actinobacteria	2.62004	67.1	-	CCYZ01	47	2310	2172	12/11/14	4/4/17	Scaffold	INRA STLO	SAMEA2822504	GCA_900000075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/000/075/GCA_900000075.1_CIRM-BIA135	-	CIRM-BIA 135
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.64986	67.2	-	LOTT01	114	6963	6614	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449155	GCA_001522455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/455/GCA_001522455.1_ASM152245v1	-	INT1-BP158
Campylobacter concisus	199	PRJNA280470	280470	Proteobacteria	delta/epsilon subdivisions	1.85443	37.4	-	NDYT01	15	1888	1797	6/4/17	6/6/17	Contig	Institute of Environmental Science and Research (ESR)	SAMN03457022	GCA_002165855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/855/GCA_002165855.1_ASM216585v1	-	Lasto393.96
Flavobacterium psychrophilum	96345	PRJDB4413	305501	FCB group	Bacteroidetes/Chlorobi group	2.70521	32.5	-	BCNG01	182	2495	2195	12/22/15	4/5/17	Contig	Kochi University	SAMD00044012	GCA_001485515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/485/515/GCA_001485515.1_ASM148551v1	26893435	KTEN-1510
Rhodococcus erythropolis JCM 9803	1298615	PRJDB891	243769	Terrabacteria group	Actinobacteria	6.87486	62.3	-	BBEK01	212	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016839	GCA_001312725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/725/GCA_001312725.1_ASM131272v1	-	JCM 9803
Lactobacillus johnsonii	33959	PRJNA384810	384810	Terrabacteria group	Firmicutes	1.95073	34.4	-	NGOD01	75	1857	1742	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848427	GCA_002253185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/185/GCA_002253185.1_ASM225318v1	-	117x
Escherichia albertii	208962	PRJDB3047	301492	Proteobacteria	Gammaproteobacteria	4.7101	49.5	-	BBVO01	103	4865	4492	11/6/15	2/25/17	Scaffold	University of Miyazaki	SAMD00026649	GCA_001514765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/765/GCA_001514765.1_ASM151476v1	26537224	NIAH_Bird_26
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.76067	47.6	-	MECE01	94	3494	3306	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320422	GCA_001882925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/925/GCA_001882925.1_ASM188292v1	-	08/0188-3K
Streptococcus equinus	1335	PRJEB15984	348277	Terrabacteria group	Firmicutes	1.8633	37.1	-	FNEP01	22	1812	1736	10/20/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216384	GCA_900100215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/215/GCA_900100215.1_IMG-taxon_2651870307_annotated_assembly	-	MPR2
Pectobacterium carotovorum subsp. carotovorum	555	PRJNA269219	269219	Proteobacteria	Gammaproteobacteria	4.81993	51.9	-	JUJG01	24	4375	4186	12/29/14	4/2/17	Contig	Beijing Academy of Agriculture and Forestry Sciences	SAMN03252600	GCA_000808215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/215/GCA_000808215.1_ASM80821v1	-	YC D57
Mycobacterium kansasii	1768	PRJNA317047	317047	Terrabacteria group	Actinobacteria	6.02733	66.2	-	LWCI01	187	5560	5000	4/27/16	4/10/17	Scaffold	University of Lodz	SAMN04599333	GCA_001632895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/895/GCA_001632895.1_Mkan_typeIV_1.0	27257194	1010001458
Brachyspira hyodysenteriae	159	PRJNA272555	272555	Spirochaetes	Spirochaetia	3.02397	27	-	JXNR01	79	2634	2503	5/26/15	4/3/17	Scaffold	Murdoch University	SAMN03286868	GCA_001013125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/013/125/GCA_001013125.1_ASM101312v1	26098837	Vic2
Lactobacillus crispatus	47770	PRJNA336560	336560	Terrabacteria group	Firmicutes	2.34173	36.8	-	MCJG01	97	2370	2090	8/13/16	4/5/17	Contig	RTI International	SAMN05513271	GCA_001704465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/465/GCA_001704465.1_ASM170446v1	-	C25
Aggregatibacter actinomycetemcomitans serotype d str. SA269	1434259	PRJNA230860	230860	Proteobacteria	Gammaproteobacteria	2.10082	44.9	-	AZTX01	511	2097	1928	3/23/16	4/5/17	Contig	"Bumgarner laboratory, Department of Microbiology, University of Washington"	SAMN04573006	GCA_001596335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/335/GCA_001596335.1_SA269v1.0	-	SA269
Rothia mucilaginosa	43675	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.23241	61.8	-	JVBL01	167	1788	1664	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197777	GCA_001065485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/485/GCA_001065485.1_ASM106548v1	26230489	574_RMUC
Gardnerella vaginalis JCP7659	1261059	PRJNA181314	181314	Terrabacteria group	Actinobacteria	1.53594	41.9	-	ATJQ01	181	1353	1174	6/25/13	4/1/17	Scaffold	Washington University	SAMN02436712	GCA_000414665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/665/GCA_000414665.1_ASM41466v1	-	JCP7659
Lactobacillus paracasei subsp. paracasei Lpp221	1256209	PRJNA178437	178437	Terrabacteria group	Firmicutes	3.0449	46.2	-	ANKF01	265	3214	2869	6/11/13	4/1/17	Contig	Danone Research	SAMN02469717	GCA_000410015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/015/GCA_000410015.1_ASM41001v1	23894338	Lpp221
Staphylococcus hominis	1290	PRJNA316783	316783	Terrabacteria group	Firmicutes	2.20902	31.4	-	LWJR01	161	2221	2064	11/10/16	4/5/17	Contig	CSIR-Institute of Microbial Technology	SAMN04590067	GCA_001876465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/465/GCA_001876465.1_ASM187646v1	-	RE2.10
Staphylococcus capitis	29388	PRJEB8618	278837	Terrabacteria group	Firmicutes	2.48716	32.8	-	CTEL01	34	2403	2286	3/25/15	4/3/17	Contig	Department of Biosecurity PCL3	SAMEA3271081	GCA_001220605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/605/GCA_001220605.1_CR09	-	CR09
Staphylococcus warneri	1292	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.50904	32.7	-	JVCA01	39	2414	2317	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197762	GCA_001073365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/365/GCA_001073365.1_ASM107336v1	26230489	562_SWAR
Acinetobacter radioresistens	40216	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.8325	41.8	-	DFNZ01	101	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06456096	GCA_002376585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/585/GCA_002376585.1_ASM237658v1	28894102	-
Rhodococcus hoagii	43767	PRJNA316970	316970	Terrabacteria group	Actinobacteria	5.48242	68.7	-	LWTW01	182	5127	4967	4/17/17	6/6/17	Contig	The University of Edinburgh	SAMN04880533	GCA_002094325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/325/GCA_002094325.1_ASM209432v1	27638249	PAM2288
Bacillus atrophaeus C89	334727	PRJNA104945	104945	Terrabacteria group	Firmicutes	4.11405	43.1	-	AJRJ01	91	4217	3992	5/24/12	6/15/17	Contig	Lab of Marine Biotechnology	SAMN02470933	GCA_000264395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/395/GCA_000264395.1_C89_version_1	22843588	C89
Klebsiella variicola	244366	PRJEB7831	268465	Proteobacteria	Gammaproteobacteria	5.78147	57	-	CDMV01	91	5783	5479	1/15/15	2/21/17	Contig	INSTITUTO NACIONAL DE SALUD	SAMEA3142085	GCA_000826565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/565/GCA_000826565.1_KVR801v1_PRJEB6019_wgs.embl.gzip	-	801
Acinetobacter nosocomialis	106654	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.98841	38.8	-	LLGK01	463	4052	3654	10/27/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145702	GCA_001415395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/395/GCA_001415395.1_ASM141539v1	-	ABBL080
Streptomyces griseus	1911	PRJNA326870	326870	Terrabacteria group	Actinobacteria	6.86622	71.6	-	MDKB01	16	5980	5668	8/29/16	3/14/17	Scaffold	"National Academy of Agricultural Science, Rural Development Adminstration"	SAMN05293542	GCA_001715295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/295/GCA_001715295.1_ASM171529v1	-	BIG105
Streptococcus oralis SK610	1095741	PRJNA75167	75167	Terrabacteria group	Firmicutes	1.98682	41.1	-	AJKQ01	31	1933	1856	4/2/12	3/30/17	Contig	J. Craig Venter Institute	SAMN00761855	GCA_000257455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/455/GCA_000257455.1_SoralisSK610v1.0	-	SK610
Achromobacter xylosoxidans	85698	PRJNA301638	301638	Proteobacteria	Betaproteobacteria	6.49995	67.8	-	LNCS01	26	5932	5824	1/26/16	4/4/17	Contig	Universidad Autonoma del Estado de Morelos	SAMN04252995	GCA_001541435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/435/GCA_001541435.1_ASM154143v1	-	CEIB 2.8
Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122	427081	PRJNA18837	18837	Proteobacteria	Gammaproteobacteria	4.87966	64.9	-	ACPX01	237	4448	3918	3/30/10	6/15/17	Scaffold	Sao Paulo State (Brazil) Consortium	SAMN02472095	GCA_000175135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/135/GCA_000175135.1_ASM17513v1	20388224	ICPB 11122
Pseudomonas syringae pv. maculicola	59511	PRJNA274689	274689	Proteobacteria	Gammaproteobacteria	6.05846	58.4	-	JYHH01	138	5640	5283	3/2/15	4/3/17	Contig	INRA	SAMN03328955	GCA_000935725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/725/GCA_000935725.1_PSMCFBP1657-G1	25931602	CFBP 1657
Pseudomonas savastanoi pv. phaseolicola	319	PRJNA287072	287072	Proteobacteria	Gammaproteobacteria	5.94447	57.8	-	LGKX01	44	5509	5024	9/18/15	4/4/17	Scaffold	University of Toronto	SAMN03837772	GCA_001294035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/035/GCA_001294035.1_PphHB10Y	-	HB10Y
Pseudoalteromonas sp. AC163	1055790	PRJNA202431	202431	Proteobacteria	Gammaproteobacteria	4.779	39.1	-	AUTK01	565	4561	3837	11/20/13	4/17/17	Contig	University of Florence	SAMN02260217	GCA_000497935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/935/GCA_000497935.1_AC163	28095778	AC163
Vibrio alginolyticus	663	PRJNA282898	282898	Proteobacteria	Gammaproteobacteria	5.0683	44.8	-	LCSG01	33	4668	4503	5/20/15	4/3/17	Contig	University of Copenhagen	SAMN03580733	GCA_001010935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/935/GCA_001010935.1_ASM101093v1	26139724	V2
Pediococcus acidilactici	1254	PRJNA336459	336459	Terrabacteria group	Firmicutes	1.45671	43	-	MDDF01	278	1383	800	11/7/16	4/5/17	Contig	ICAR-National Research Centre on Camel	SAMN05510866	GCA_001867265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/265/GCA_001867265.1_ASM186726v1	-	NRCC4
Proteus mirabilis	584	PRJNA340922	340922	Proteobacteria	Gammaproteobacteria	4.19046	39.3057	chromosome:NZ_CP017085.1/CP017085.1; plasmid pT18:NZ_CP017086.1/CP017086.1	-	2	3999	3725	9/18/17	9/20/17	Complete Genome	Zhejiang University	SAMN05715220	GCA_002310895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/895/GCA_002310895.1_ASM231089v1	-	T18
Enterobacter asburiae	61645	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.42407	56.2	-	LECX01	32	4259	4105	6/9/15	4/3/17	Contig	JCVI	SAMN03732687	GCA_001023015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/015/GCA_001023015.1_ASM102301v1	-	GN04222
Brucella sp. UK5/01	437685	PRJNA173609	173609	Proteobacteria	Alphaproteobacteria	3.37373	57.2	-	AQNS01	34	3438	3217	4/16/13	4/17/17	Contig	Broad Institute	SAMN00811229	GCA_000367105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/105/GCA_000367105.1_Bruc_sp_UK5_01_V1	-	UK5/01
Pseudomonas amygdali pv. sesami	86841	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	6.02868	58.1	-	LJRG01	462	5679	5244	10/20/15	4/4/17	Scaffold	University of Toronto	SAMN03976303	GCA_001401265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/265/GCA_001401265.1_PseICMP763	-	ICMP763
Xanthomonas euvesicatoria	456327	PRJNA267089	267089	Proteobacteria	Gammaproteobacteria	5.15709	64.7	-	JTEI01	399	4765	4149	7/21/16	4/5/17	Contig	Institut de Recherche pour le Developpement	SAMN03177541	GCA_001691325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/325/GCA_001691325.1_XEU_LMG905_E1.0	-	LMG 905
Acinetobacter pittii	48296	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	4.19047	38.6	-	BBTS01	123	4082	3861	2/17/15	4/3/17	Contig	National Institute of Technology and Evaluation	SAMD00020354	GCA_000934125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/125/GCA_000934125.1_ASM93412v1	-	NBRC 110510
Riemerella anatipestifer	34085	PRJNA308997	308997	FCB group	Bacteroidetes/Chlorobi group	2.08621	35	-	LUDP01	26	1955	1891	6/20/16	4/5/17	Contig	Sichuan Agricultural University	SAMN04419275	GCA_001670695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/670/695/GCA_001670695.1_RCAD0123	-	RCAD0123
Staphylococcus lugdunensis VCU139	904346	PRJNA53775	53775	Terrabacteria group	Firmicutes	2.52414	33.7	-	AHLK01	69	2432	2238	2/7/12	3/30/17	Contig	J. Craig Venter Institute	SAMN02436593	GCA_000247225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/225/GCA_000247225.2_ASM24722v2	-	VCU139
Streptococcus anginosus	1328	PRJNA270123	270123	Terrabacteria group	Firmicutes	1.85372	38.9	-	LMVI01	2	1828	1706	1/11/16	4/5/17	Contig	Chosun University	SAMN03263072	GCA_001510585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/585/GCA_001510585.1_ASM151058v1	-	ChDC B695
Pantoea ananatis	553	PRJNA278205	278205	Proteobacteria	Gammaproteobacteria	4.72149	53.5	-	LDQZ01	174	4527	4269	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401370	GCA_001475725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/725/GCA_001475725.1_ASM147572v1	26793183	NS311
Streptococcus gallolyticus	315405	PRJEB17210	351400	Terrabacteria group	Firmicutes	2.37028	37.7	-	FOLZ01	17	2355	2242	10/31/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02983012	GCA_900112565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/565/GCA_900112565.1_IMG-taxon_2599185152_annotated_assembly	-	ATCC 700065
Leptospira santarosai serovar Szwajizak str. Oregon	1291304	PRJNA188962	188962	Spirochaetes	Spirochaetia	3.90652	41.9	-	AOXB01	123	3982	3659	3/1/13	4/1/17	Contig	J. Craig Venter Institute	SAMN01920623	GCA_000343395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/395/GCA_000343395.1_CA_glsol025	-	Oregon
Citrobacter freundii	546	PRJNA252011	252011	Proteobacteria	Gammaproteobacteria	5.25478	51.5	-	JRTJ01	147	5238	4980	10/26/15	4/4/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872792	GCA_001412815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/815/GCA_001412815.1_ASM141281v1	25501822	RU2 BHI16
Fusobacterium necrophorum subsp. funduliforme	143387	PRJNA315619	315619	Fusobacteria	Fusobacteriia	2.23929	34.8	-	LVEV01	49	2231	2127	3/25/16	4/5/17	Contig	Aarhus University	SAMN04570262	GCA_001597395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/395/GCA_001597395.1_ASM159739v1	-	F1248
Streptococcus parasanguinis	1318	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.27617	41.5	-	JVSS01	99	2227	2133	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197328	GCA_001070575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/575/GCA_001070575.1_ASM107057v1	26230489	139.rep1_SPAR
Agrobacterium sp. DSM 25558	1907665	PRJEB15704	369060	Proteobacteria	Alphaproteobacteria	5.68826	56.5	-	FMUD01	97	5504	5182	1/27/17	4/17/17	Contig	CEBITEC	SAMEA4504210	GCA_900100825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/825/GCA_900100825.1_Agro1	-	-
Haemophilus parainfluenzae	729	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.14839	39.2	-	LZMW01	18	2062	1932	7/5/16	4/5/17	Scaffold	TAILORED-Treatment project	SAMN05219234	GCA_001679405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/405/GCA_001679405.1_ASM167940v1	-	CCUG 58848
Actinomyces oris	544580	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.28387	68	-	MSKQ01	118	2764	2541	1/5/17	4/6/17	Scaffold	King's College London	SAMN05898724	GCA_001937725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/725/GCA_001937725.1_ASM193772v1	-	A19A-1
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.02088	54.9	-	JTCF02	74	4987	4752	11/17/14	3/25/17	Contig	JCVI	SAMN03012822	GCA_000784155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/155/GCA_000784155.2_SPADES_assembly_of_Enterobacter_cloacae_ND7	-	ND7
Vibrio anguillarum	55601	PRJNA267069	267069	Proteobacteria	Gammaproteobacteria	4.16401	44.6663	chromosome I:CP010032.1; chromosome II:CP010033.1; plasmid pJM1:CP016258.1	-	3	3595	3468	2/7/17	2/7/17	Chromosome	University of Copenhagen	SAMN03177545	GCA_001989775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/775/GCA_001989775.1_ASM198977v1	-	261/91
Kingella kingae KK245	1348244	PRJEB4192	209624	Proteobacteria	Betaproteobacteria	1.99219	46.7	-	CBSB01	1	1973	1616	9/10/13	4/2/17	Scaffold	URMITE	SAMEA2272537	GCA_000470195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/195/GCA_000470195.1_KK245	-	KK245
Streptococcus pseudopneumoniae	257758	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.08781	40.9	-	JVWP01	156	2096	1952	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197227	GCA_001068925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/925/GCA_001068925.1_ASM106892v1	26230489	126_SPSE
Xanthomonas perforans	442694	PRJNA350372	350372	Proteobacteria	Gammaproteobacteria	5.01299	64.9	-	MOLQ01	32	4491	4196	1/31/17	4/6/17	Contig	INRA	SAMN05938607	GCA_001976075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/075/GCA_001976075.1_ASM197607v1	-	CFBP 7293
Streptobacillus moniliformis	34105	PRJNA319313	319313	Fusobacteria	Fusobacteriia	1.71626	26.4	-	LWTB01	202	1634	1501	6/4/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04892740	GCA_001657765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/765/GCA_001657765.1_ASM165776v1	-	IPDH 109/83
Klebsiella aerogenes MGH 78	1439323	PRJNA234118	234118	Proteobacteria	Gammaproteobacteria	5.31151	55.1	-	JMUO01	2	5183	4945	5/19/14	4/10/17	Scaffold	Broad Institute	SAMN02581251	GCA_000692215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/215/GCA_000692215.1_Ente_aero_MGH_78_V1	-	MGH 78
Leuconostoc pseudomesenteroides	33968	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.86409	39.1	-	MPLK01	85	1904	1718	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981499	GCA_002092635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/635/GCA_002092635.1_ASM209263v1	28217118	LN12
Corynebacterium ulcerans	65058	PRJNA277223	277223	Terrabacteria group	Actinobacteria	2.43938	53.4	-	JZUT01	23	2195	1717	5/5/15	5/27/15	Contig	Laboratoire de sante publique du Quebec	SAMN03387457	GCA_000988295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/295/GCA_000988295.1_ASM98829v1	-	LSPQ-04228
Aeromonas veronii	654	PRJNA296464	296464	Proteobacteria	Gammaproteobacteria	4.67551	58.6	-	LKKC01	81	4345	4110	11/19/15	4/4/17	Contig	Texas Tech University	SAMN04099663	GCA_001446775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/775/GCA_001446775.1_ASM144677v1	26824353	TTU2014-140ASC
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96566	64.1	-	FVCN01	20	4907	4744	3/10/17	3/18/17	Contig	SC	SAMEA2068673	GCA_900131215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/215/GCA_900131215.1_10665_3_64	-	234
Gallibacterium anatis 7990	1396511	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.49803	39.6	-	JPJL01	91	2384	2226	11/5/14	4/2/17	Contig	University of Copenhagen	SAMN02344104	GCA_000772385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/385/GCA_000772385.1_ASM77238v1	-	7990
Mycobacterium africanum MAL010128	1354179	PRJNA211665	211665	Terrabacteria group	Actinobacteria	4.38481	65.6	-	JKZX01	2	4236	4033	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02231132	GCA_000666705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/705/GCA_000666705.1_Myco_afri_MAL010128_V1	-	MAL010128
Pantoea agglomerans pv. betae	77834	PRJNA320975	320975	Proteobacteria	Gammaproteobacteria	5.002	55	-	LXSW01	79	4781	4514	6/13/16	4/5/17	Scaffold	Tel-Aviv University	SAMN04961652	GCA_001662025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/025/GCA_001662025.1_ASM166202v1	-	4188
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.31565	66.8	-	LOSW01	86	7669	7319	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449130	GCA_001521975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/975/GCA_001521975.1_ASM152197v1	-	RF3-non_BP5
Enterococcus hirae	1354	PRJNA342049	342049	Terrabacteria group	Firmicutes	3.04297	36.7	-	MJDQ01	28	2865	2666	4/3/17	4/5/17	Contig	Lethbridge Research Centre	SAMN05735014	GCA_002077575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/575/GCA_002077575.1_ASM207757v1	28270110	F1129E 113
Morganella morganii subsp. morganii	180434	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	3.87826	51	-	NEYR01	38	3705	3590	6/9/17	6/12/17	Contig	JCVI	SAMN06812672	GCA_002184465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/465/GCA_002184465.1_ASM218446v1	-	ARLG-2976
Streptococcus sobrinus TCI-124	1074069	PRJNA71907	71907	Terrabacteria group	Firmicutes	2.07669	43.5	-	AGGS01	255	2082	1856	10/6/11	3/30/17	Contig	JCVI	SAMN02436461	GCA_000228125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/125/GCA_000228125.2_SMUT1-NEX_62-124	-	TCI-124
Geobacillus sp. B4113_201601	1586290	PRJNA270597	270597	Terrabacteria group	Firmicutes	3.65113	51.3	-	LQYX01	122	3743	3326	3/11/16	4/12/17	Scaffold	University of Groningen	SAMN04390296	GCA_001587475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/475/GCA_001587475.1_B4113	27151781	B4113_201601
Actinomyces naeslundii	1655	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.11969	67.9	-	MSRR01	47	2656	2525	1/18/17	4/6/17	Scaffold	King's College London	SAMN05898701	GCA_001956585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/585/GCA_001956585.1_ASM195658v1	-	NCTC 10301
Mycobacterium chelonae	1774	PRJNA347845	347845	Terrabacteria group	Actinobacteria	5.33146	64.1	-	MLIN01	31	5226	5080	10/26/16	4/5/17	Contig	University of Georgia	SAMN05897995	GCA_001853925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/925/GCA_001853925.1_ASM185392v1	-	15512
Vibrio campbellii	680	PRJNA257165	257165	Proteobacteria	Gammaproteobacteria	5.48505	45.6	-	JPTF01	552	5082	4813	7/22/15	4/3/17	Contig	Naval Research Laboratory	SAMN02948014	GCA_001185265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/265/GCA_001185265.1_ASM118526v1	-	602L
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28391	32.4	chromosome:AP017595.1	-	1	-	-	1/24/17	1/27/17	Chromosome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053866	GCA_002356835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/835/GCA_002356835.1_ASM235683v1	-	M13010
Campylobacter lanienae	75658	PRJNA340994	340994	Proteobacteria	delta/epsilon subdivisions	1.55955	34.6	-	MJJH01	17	1622	1538	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687014	GCA_002139255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/255/GCA_002139255.1_ASM213925v1	28854596	P0086
Rhodococcus fascians LMG 3625	1443905	PRJNA233522	233522	Terrabacteria group	Actinobacteria	5.93676	64.2	-	JMEM01	17	5719	5576	9/30/14	4/2/17	Scaffold	Oregon State University	SAMN02570004	GCA_000761075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/075/GCA_000761075.1_R_fas_LMG3625	-	LMG 3625
Aeribacillus pallidus	33936	PRJNA348652	348652	Terrabacteria group	Firmicutes	4.08946	39.3	chromosome:NZ_CP017703.1/CP017703.1	-	1	4054	3669	8/8/17	8/10/17	Complete Genome	Kyungpook National University	SAMN05913071	GCA_002243625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/625/GCA_002243625.1_ASM224362v1	-	KCTC3564
Leptospira kirschneri	29507	PRJNA257123	257123	Spirochaetes	Spirochaetia	4.4495	35.8	-	JQHI01	335	3991	3628	3/2/17	3/4/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947888	GCA_002009725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/725/GCA_002009725.1_ASM200972v1	-	56168
Salinispora pacifica DSM 45546	1050198	PRJNA86629	86629	Terrabacteria group	Actinobacteria	5.45034	69.7	-	AQZV01	1	4963	4716	4/22/13	4/1/17	Scaffold	JGI	SAMN02261319	GCA_000384095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/095/GCA_000384095.1_ASM38409v1	-	DSM 45546
Xanthomonas arboricola pv. pruni str. MAFF 311562	1414836	PRJDB1518	235281	Proteobacteria	Gammaproteobacteria	5.08549	65.3	-	BAVB01	432	5422	4897	1/11/14	9/16/15	Contig	"NARO Institute of Fruit Tree Science (NIFTS), National Agriculture and Food Research Organization (NARO)"	SAMD00036781	GCA_000524435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/435/GCA_000524435.1_ASM52443v1	-	MAFF311562
Elizabethkingia anophelis NUHP2	1338012	PRJNA205478	205478	FCB group	Bacteroidetes/Chlorobi group	4.33465	35.5	-	ASYF01	59	4013	3891	11/7/13	4/2/17	Contig	SCELSE	SAMN02470989	GCA_000495955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/955/GCA_000495955.1_NUHP2	24012265	NUHP2
Pseudoalteromonas luteoviolacea B = ATCC 29581	1268239	PRJEB1194	183737	Proteobacteria	Gammaproteobacteria	4.04627	41.9	-	CAPN01	61	3779	3681	1/10/13	1/30/15	Contig	RPI	SAMEA2272636	GCA_000333235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/235/GCA_000333235.1_ASM33323v1	-	B = ATCC 29581
Pseudomonas fragi	296	PRJNA397499	397499	Proteobacteria	Gammaproteobacteria	5.29887	59.2	-	NQKM01	117	5008	4774	8/24/17	8/27/17	Scaffold	CSIRO Agriculture and Food	SAMN07459810	GCA_002269625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/625/GCA_002269625.1_ASM226962v1	-	F1818
Vibrio cyclitrophicus ZF99	1136170	PRJNA81885	81885	Proteobacteria	Gammaproteobacteria	4.91729	43.6	-	AIDL02	80	4307	4171	3/26/12	4/5/17	Scaffold	Massachusetts Institute of Technology	SAMN02470460	GCA_000256345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/345/GCA_000256345.2_ASM25634v2	22491847	ZF99
Enterococcus cecorum	44008	PRJNA268097	268097	Terrabacteria group	Firmicutes	2.43729	36.3	chromosome:CP010062.1	-	1	-	-	10/16/15	10/16/15	Chromosome	NC State University	SAMN03202986	GCA_001318325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/325/GCA_001318325.1_ASM131832v1	-	CE2
Pseudomonas chlororaphis subsp. aureofaciens	587851	PRJNA290438	290438	Proteobacteria	Gammaproteobacteria	6.80214	63	-	LHVB01	32	6177	5991	8/18/15	4/4/17	Contig	JLU	SAMN03891667	GCA_001269595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/595/GCA_001269595.1_ASM126959v1	-	CD
Alkalitalea saponilacus	889453	PRJNA389474	389474	FCB group	Bacteroidetes/Chlorobi group	4.77557	39.3	chromosome:NZ_CP021904.1/CP021904.1	-	1	3689	3569	6/20/17	6/22/17	Complete Genome	Chinese Academy of Agricultural Sciences	SAMN07200443	GCA_002201795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/795/GCA_002201795.1_ASM220179v1	-	SC/BZ-SP2
Staphylococcus equorum	246432	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.88104	32.8	-	LNDI01	73	2812	2676	9/28/16	4/5/17	Scaffold	Tufts University	SAMN04244257	GCA_001747945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/945/GCA_001747945.1_ASM174794v1	-	900_4
Alcaligenes faecalis	511	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	3.68425	57.2	-	DGGI01	16	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452818	GCA_002392125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/125/GCA_002392125.1_ASM239212v1	28894102	-
Acinetobacter baumannii DU202	1370126	PRJNA213256	213256	Proteobacteria	Gammaproteobacteria	4.17896	39.3	chromosome:NZ_CP017152.1/CP017152.1	-	1	4123	3840	9/16/16	3/21/17	Complete Genome	Korea Basic Science Institute	SAMN02470137	GCA_000498375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/375/GCA_000498375.2_ASM49837v2	24486871	DU202
Paeniclostridium sordellii	1505	PRJEB8137	277662	Terrabacteria group	Firmicutes	3.50717	27.3	-	CELD01	43	3429	3323	3/13/15	4/4/17	Contig	WTSI	SAMEA1572115	GCA_001372635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/635/GCA_001372635.1_W3026	-	W3026
Bordetella holmesii 04P3421	1458267	PRJNA237092	237092	Proteobacteria	Betaproteobacteria	3.59524	62.7	-	JGWC01	213	3687	3119	5/1/14	4/2/17	Contig	JCVI	SAMN02614585	GCA_000662215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/215/GCA_000662215.1_gbb71v01	24948754	04P3421
Acinetobacter sp. NIPH 817	520708	PRJNA183306	183306	Proteobacteria	Gammaproteobacteria	4.1189	38.7	-	APPF01	16	3980	3794	4/16/13	5/18/17	Scaffold	Broad Institute	SAMN01828166	GCA_000368405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/405/GCA_000368405.1_Acin_sp_NIPH817_V1	-	NIPH 817
Klebsiella sp. KGM-IMP216	1714265	PRJNA294947	294947	Proteobacteria	Gammaproteobacteria	5.7315	57	-	LJOI01	77	5834	5513	11/13/15	2/21/17	Contig	LAU	SAMN04046648	GCA_001443245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/443/245/GCA_001443245.1_ASM144324v1	26823584	KGM-IMP216
Flavobacterium sp. ABG	1423322	PRJNA286117	286117	FCB group	Bacteroidetes/Chlorobi group	5.27001	35.1	-	LEKS01	89	4366	4214	6/14/15	4/10/17	Contig	GCAT-SEEK	SAMN03765149	GCA_001027725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/725/GCA_001027725.1_ASM102772v1	-	ABG
Frankia sp. BMG5.36	1834512	PRJNA318448	318448	Terrabacteria group	Actinobacteria	11.2039	71.3	-	MBLO01	280	9304	8443	10/26/16	4/13/17	Contig	"University of Tunis El Manar, Faculty of Sciences of Tunis"	SAMN04851314	GCA_001854805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/805/GCA_001854805.1_ASM185480v1	-	BMG5.36
Arachidicoccus sp. BS20	1850526	PRJNA322235	322235	FCB group	Bacteroidetes/Chlorobi group	3.4925	39.3	chromosome:NZ_CP015971.1/CP015971.1	-	1	3046	2971	6/8/16	4/12/17	Complete Genome	Hankyong National University	SAMN05006811	GCA_001659705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/705/GCA_001659705.1_ASM165970v1	-	BS20
Clostridium sp. HMSC19A11	1581179	PRJNA269808	269808	Terrabacteria group	Firmicutes	4.23552	28.8	-	LWPJ01	117	3985	3835	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436140	GCA_001806555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/555/GCA_001806555.1_ASM180655v1	-	HMSC19A11
Sphingomonas sp. Leaf22	1735687	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.21637	66.3	-	LMKP01	45	3821	3702	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151586	GCA_001421715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/715/GCA_001421715.1_Leaf22	26633631	Leaf22
Fictibacillus phosphorivorans	1221500	PRJNA283510	283510	Terrabacteria group	Firmicutes	4.23067	39.3	chromosome:NZ_CP015378.1/CP015378.1	-	1	4320	4207	5/6/16	4/12/17	Complete Genome	Institute of Life Sciences and Technology	SAMN03651894	GCA_001629705.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/629/705/GCA_001629705.2_ASM162970v2	-	G25-29
Rhodococcus sp. KB6	1752066	PRJNA301531	301531	Terrabacteria group	Actinobacteria	6.9989	62.5	-	LNAK01	165	6578	6348	11/18/15	4/11/17	Scaffold	Korea Research Institute of Bioscience and Biotechnology (KRIBB)	SAMN04251461	GCA_001445685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/685/GCA_001445685.1_ASM144568v1	-	KB6
Enterobacter sp. BIDMC 27	1329839	PRJNA202038	202038	Proteobacteria	Gammaproteobacteria	4.83873	55.3	-	JCLD01	4	4708	4482	2/3/14	4/9/17	Scaffold	Broad Institute	SAMN02138657	GCA_000534415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/415/GCA_000534415.1_Ente_cloa_complex_BIDMC_27_V1	-	BIDMC 27
Staphylococcus sp. HMSC069E10	1715041	PRJNA296168	296168	Terrabacteria group	Firmicutes	2.15787	31.3	-	LTKE01	49	2101	2043	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04495791	GCA_001809205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/205/GCA_001809205.1_ASM180920v1	-	HMSC069E10
Corynebacterium sp. KPL1814	1203557	PRJNA169437	169437	Terrabacteria group	Actinobacteria	2.501	58.9	-	AXMC01	7	2360	2180	10/21/13	4/17/17	Scaffold	Broad Institute	SAMN02597009	GCA_000478175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/175/GCA_000478175.1_Cory_sp_KPL1814_V1	-	KPL1814
Arthrobacter sp. 161MFSha2.1	1151118	PRJNA175168	175168	Terrabacteria group	Actinobacteria	4.57212	63.1	-	ARGU01	42	4293	4150	4/19/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440447	GCA_000374945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/945/GCA_000374945.1_ASM37494v1	-	161MFSha2.1
Shewanella sp. Alg231_23	1827396	PRJEB13410	325117	Proteobacteria	Gammaproteobacteria	5.81772	43.6	-	FKJK01	23	5117	4887	6/9/16	4/12/17	Contig	Elham Karimi	SAMEA3925393	GCA_900079515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/515/GCA_900079515.1_Shewanella_sp.Alg231_23	-	Alg231_23
Bradyrhizobium sp. WSM3983	1038867	PRJNA162993	162993	Proteobacteria	Alphaproteobacteria	8.7896	63	-	AXAY01	70	8416	7942	9/30/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440715	GCA_000473045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/045/GCA_000473045.1_ASM47304v1	-	WSM3983
Streptococcus sp. DD10	1777878	PRJNA304333	304333	Terrabacteria group	Firmicutes	2.18998	39.5	-	LQRE01	84	2045	1799	3/2/16	4/12/17	Scaffold	University of Kaiserslautern	SAMN04324329	GCA_001578805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/805/GCA_001578805.1_ASM157880v1	27303717	DD10
Mycobacterium sp. URHB0044	1380386	PRJNA213774	213774	Terrabacteria group	Actinobacteria	7.48587	66.8	-	JIAW01	41	7289	7092	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743948	GCA_000620625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/625/GCA_000620625.1_ASM62062v1	-	URHB0044
Serratia sp. ISTD04	1261032	PRJNA327498	327498	Proteobacteria	Gammaproteobacteria	5.06914	59.7	-	MBDW01	120	4797	4618	8/26/16	4/13/17	Contig	National Institute of Plant Genome Research	SAMN05335729	GCA_001714765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/765/GCA_001714765.1_SerISTD041.0	-	ISTD04
Polaromonas sp. 16-63-31	1970412	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	4.91376	62.9	-	NCGW01	57	4809	4679	8/16/17	8/16/17	Scaffold	None	SAMN06622284	GCA_002281715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/715/GCA_002281715.1_ASM228171v1	-	-
Pantoea sp. CFSAN033090	1690502	PRJNA283309	283309	Proteobacteria	Gammaproteobacteria	4.94297	54.9	-	LGYX01	47	4697	4501	8/11/15	4/10/17	Contig	FDA	SAMN03897582	GCA_001264395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/395/GCA_001264395.1_CFSAN033090	-	CFSAN033090
Prevotella sp. MSX73	1032506	PRJNA78571	78571	FCB group	Bacteroidetes/Chlorobi group	3.16491	51.2	-	ALJQ01	47	2665	2539	8/13/12	4/17/17	Contig	J. Craig Venter Institute	SAMN00828778	GCA_000287635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/635/GCA_000287635.1_PspMSX73v1.0	-	MSX73
Enterococcus sp. HMSC067C01	1739370	PRJNA300020	300020	Terrabacteria group	Firmicutes	2.73987	38.2	-	LTYC01	120	2775	2559	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480034	GCA_001812615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/615/GCA_001812615.1_ASM181261v1	-	HMSC067C01
Lactobacillus sp. HMSC056D05	1739473	PRJNA300123	300123	Terrabacteria group	Firmicutes	3.10308	46.7	-	LTUW01	102	3132	2889	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480394	GCA_001814405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/405/GCA_001814405.1_ASM181440v1	-	HMSC056D05
Novosphingobium sp. B 225	1961849	PRJNA302799	302799	Proteobacteria	Alphaproteobacteria	3.71211	63.7	-	MWLM01	73	3529	3407	6/19/17	6/22/17	Scaffold	Eisenbakterien Odertal	SAMN06335524	GCA_002198665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/665/GCA_002198665.1_ASM219866v1	-	B 225
Treponema sp. UBA775	1947755	PRJNA348753	348753	Spirochaetes	Spirochaetia	2.45172	36.7	-	DBJN01	85	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456211	GCA_002297145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/145/GCA_002297145.1_ASM229714v1	28894102	-
Citrobacter sp. A1	1173691	PRJNA159243	159243	Proteobacteria	Gammaproteobacteria	5.09063	51.8	-	AKTT01	73	5104	4843	7/10/12	5/18/17	Contig	Universiti Teknologi Malaysia	SAMN02471426	GCA_000277565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/565/GCA_000277565.1_ASM27756v1	22965102	A1
Methylobacterium sp. Leaf100	1736252	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.71624	68.8	-	LMMW01	63	4393	4207	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151632	GCA_001422845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/845/GCA_001422845.1_Leaf100	26633631	Leaf100
Nocardioides sp. Soil805	1736416	PRJNA298127	298127	Terrabacteria group	Actinobacteria	4.40772	72.2	-	LMSU01	9	4235	4136	11/2/15	4/11/17	Scaffold	ETH Zurich	SAMN04155681	GCA_001429625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/625/GCA_001429625.1_Soil805	26633631	Soil805
Erythrobacter sp. HI0037	1822230	PRJNA305749	305749	Proteobacteria	Alphaproteobacteria	5.76906	63.3	-	LWEV01	2993	5317	4492	5/2/16	5/2/16	Contig	Massachusetts Institute of Technology	SAMN04580769	GCA_001634865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/865/GCA_001634865.1_ASM163486v1	-	HI0037
Marinobacter sp. ANT_B65	2039467	PRJNA408296	408296	Proteobacteria	Gammaproteobacteria	4.17384	53.7	-	NXGV01	8	3861	3743	10/2/17	10/2/17	Contig	UNICAMP	SAMN07682857	GCA_002407605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/407/605/GCA_002407605.1_ASM240760v1	-	ANT_B65
Acidovorax sp. NO-1	512030	PRJNA73993	73993	Proteobacteria	Betaproteobacteria	5.01174	64.4	-	AGTS01	161	4671	4417	12/15/11	5/18/17	Contig	Huazhong Agricultural University	SAMN02471019	GCA_000238595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/595/GCA_000238595.2_ASM23859v2	22374962	NO-1
Psychrobacter sp. TB2	1055808	PRJNA228349	228349	Proteobacteria	Gammaproteobacteria	3.03323	44.8	-	AYUI01	47	2569	2438	12/16/13	4/17/17	Scaffold	University of Florence	SAMN02471748	GCA_000508345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/345/GCA_000508345.1_PsyTB2_v1.0	-	TB2
Caulobacter sp. JGI 0001010-J14	1157689	PRJNA169806	169806	Proteobacteria	Alphaproteobacteria	1.76822	67.5	-	AQWZ01	326	-	-	4/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441392	GCA_000382625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/625/GCA_000382625.1_ASM38262v1	-	JGI 0001010-J14
Janthinobacterium sp. GW460W	1981502	PRJNA383021	383021	Proteobacteria	Betaproteobacteria	6.26851	62.9	-	NEGX01	90	5637	5404	5/11/17	5/22/17	Scaffold	Lawrence Berkeley National Laboratory	SAMN06758630	GCA_002127575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/575/GCA_002127575.1_ASM212757v1	-	GW460W
Eubacterium sp. CAG:192	1262883	PRJEB749	206612	Terrabacteria group	Firmicutes	2.19572	33.3	-	CBDB01	188	1846	1830	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138677	GCA_000435815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/815/GCA_000435815.1_MGS192	-	-
Brevundimonas sp. 32-68-21	1970328	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.53499	67.6	-	NCER01	454	2789	2403	8/16/17	8/16/17	Scaffold	None	SAMN06622341	GCA_002280775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/775/GCA_002280775.1_ASM228077v1	-	-
uncultured Stenotrophomonas sp.	165438	PRJEB13038	386642	Proteobacteria	Gammaproteobacteria	3.24501	67.8	-	FLTS01	2	3182	3049	5/15/17	5/15/17	Contig	Genoscope CEA	SAMEA3907567	GCA_900078405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/405/GCA_900078405.1_STPYR_PRJEB13038v1	-	-
Paenibacillus sp. URHA0014	1380372	PRJNA213760	213760	Terrabacteria group	Firmicutes	7.37117	45.1	-	JIAZ01	39	6512	6241	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743950	GCA_000620565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/565/GCA_000620565.1_ASM62056v1	-	URHA0014
Ruminococcus sp. CAG:488	1262959	PRJEB904	206927	Terrabacteria group	Firmicutes	2.20639	44.4	-	CBBI01	50	1998	1967	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138590	GCA_000434055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/055/GCA_000434055.1_MGS488	-	-
Thioalkalivibrio sp. AKL3	1158153	PRJNA178479	178479	Proteobacteria	Gammaproteobacteria	2.82028	66.3	-	ARJA01	33	2786	2640	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441671	GCA_000377805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/805/GCA_000377805.1_ASM37780v1	-	AKL3
Bacteroides sp. HPS0048	1078089	PRJNA72497	72497	FCB group	Bacteroidetes/Chlorobi group	6.09602	40.6	-	AGEU01	10	4851	4594	4/23/13	4/8/17	Scaffold	Broad Institute	SAMN02596735	GCA_000382465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/465/GCA_000382465.1_Bact_sp_HPS0048_V1	-	HPS0048
Exiguobacterium sp. 8-11-1	1315212	PRJNA208893	208893	Terrabacteria group	Firmicutes	2.90575	52.8	-	ATKK01	31	2950	2908	7/18/13	4/8/17	Scaffold	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN02470036	GCA_000438555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/555/GCA_000438555.1_V1	23950124	8/11/01
Shigella sp. FC1180	1890304	PRJNA338857	338857	Proteobacteria	Gammaproteobacteria	4.35637	50.8	-	MDJJ01	383	4566	3943	8/26/16	8/26/16	Contig	Christian Medical College	SAMN05572630	GCA_001714945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/945/GCA_001714945.1_ASM171494v1	-	FC1180
Prochlorococcus sp. HOT208_60m_810P02	1961087	PRJNA375759	375759	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.29	31.3	-	MWOV01	198	1429	1288	3/14/17	3/16/17	Scaffold	Massachusetts Institute of Technology	SAMN06345447	GCA_002025905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/905/GCA_002025905.1_ASM202590v1	-	HOT208_60m_810P02
Actinomyces sp. HMSC072A03	1739339	PRJNA299989	299989	Terrabacteria group	Actinobacteria	2.40529	56.2	-	LTEW01	99	2200	2090	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477647	GCA_001812065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/065/GCA_001812065.1_ASM181206v1	-	HMSC072A03
Desulfovibrio sp. Zagget14	1930005	PRJNA357304	357304	Proteobacteria	delta/epsilon subdivisions	2.68358	60.6	-	MSHO01	245	-	-	1/10/17	1/10/17	Scaffold	University of Queensland	SAMN06140843	GCA_001941235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/235/GCA_001941235.1_ASM194123v1	-	-
Propionibacterium sp. HMSC062D05	1739515	PRJNA300166	300166	Terrabacteria group	Actinobacteria	2.55002	60.1	-	LTTJ01	25	2578	2450	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480433	GCA_001815225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/225/GCA_001815225.1_ASM181522v1	-	HMSC062D05
Alistipes sp. 56_11	1896968	PRJNA321218	321218	FCB group	Bacteroidetes/Chlorobi group	2.22355	56.6	-	MNQE01	57	1945	1674	12/23/16	12/23/16	Scaffold	None	SAMN05717210	GCA_001915255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/255/GCA_001915255.1_ASM191525v1	27819664	-
Campylobacter sp. 112	2039336	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.6613	30.6	-	NXAX01	37	1739	1627	9/27/17	9/27/17	Contig	University of California at Davis	SAMN05711877	GCA_002383855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/855/GCA_002383855.1_ASM238385v1	-	112
Neisseria sp. HMSC068C04	1715179	PRJNA296307	296307	Proteobacteria	Betaproteobacteria	2.32897	48.6	-	LTIL01	122	2261	2131	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477543	GCA_001810105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/105/GCA_001810105.1_ASM181010v1	-	HMSC068C04
Pseudonocardia sp. Ae505_Ps2	1885034	PRJNA336260	336260	Terrabacteria group	Actinobacteria	6.38989	73.6	-	MCIP01	13	5992	5683	1/4/17	4/17/17	Scaffold	University of East Anglia	SAMN05507020	GCA_001932425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/425/GCA_001932425.1_ASM193242v1	-	Ae505_Ps2
uncultured Collinsella sp.	165190	PRJEB10915	297013	Terrabacteria group	Actinobacteria	2.23957	62.1	-	FMEN01	28	1916	1865	8/16/16	8/16/16	Scaffold	SC	SAMEA3545315	GCA_900066465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/465/GCA_900066465.1_13470_2_68	-	-
Sphingobacterium sp. UBA1601	1947484	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	5.52952	39.9	-	DCNH01	194	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451974	GCA_002322695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/695/GCA_002322695.1_ASM232269v1	28894102	-
Rhodanobacter sp. OK091	1881037	PRJEB18392	355728	Proteobacteria	Gammaproteobacteria	4.41989	63.8	-	FRCH01	11	3917	3787	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428972	GCA_900142825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/825/GCA_900142825.1_IMG-taxon_2690315657_annotated_assembly	-	OK091
Rothia sp. HMSC066G02	1739398	PRJNA300048	300048	Terrabacteria group	Actinobacteria	2.26925	59.5	-	LTXD01	31	1778	1692	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480060	GCA_001813145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/145/GCA_001813145.1_ASM181314v1	-	HMSC066G02
Sphingobium sp. GW456-12-10-14-TSB1	1987165	PRJNA386048	386048	Proteobacteria	Alphaproteobacteria	5.07858	63.1	-	NGUN01	6	4849	4621	5/18/17	5/24/17	Contig	Lawrence Berkeley National Laboratory	SAMN06922257	GCA_002148915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/915/GCA_002148915.1_ASM214891v1	-	GW456-12-10-14-TSB1
Halomonas sp. BC04	1403540	PRJNA221128	221128	Proteobacteria	Gammaproteobacteria	5.9211	62.4	-	AZQX01	433	5808	4212	2/11/14	4/9/17	Contig	"Microbial Gene Research & Resources Facility, Griffith University"	SAMN02952961	GCA_000568385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/385/GCA_000568385.1_Halomonas_isolate_BC04	-	BC04
Idiomarina sp. UBA3992	1946643	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.96876	46.4	-	DGBY01	62	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451727	GCA_002384375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/375/GCA_002384375.1_ASM238437v1	28894102	-
Rhizobium sp. N941	1703971	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.85201	61.4298	chromosome RspN941:NZ_CP013643.1/CP013643.1; plasmid pRspN941a:NZ_CP013644.1/CP013644.1; plasmid pRspN941b:NZ_CP013645.1/CP013645.1; plasmid pRspN941d:NZ_CP013648.1/CP013648.1; plasmid pRspN941e:NZ_CP013649.1/CP013649.1	-	7	6608	6262	6/17/16	4/13/17	Chromosome	Centro de Ciencias Genomicas UNAM	SAMN03998648	GCA_001675075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/075/GCA_001675075.1_ASM167507v1	-	N941
Chryseobacterium sp. Leaf405	1736367	PRJNA297956	297956	FCB group	Bacteroidetes/Chlorobi group	4.49251	34.3	-	LMQN01	21	4140	4004	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151757	GCA_001425355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/355/GCA_001425355.1_Leaf405	26633631	Leaf405
Cellulomonas sp. 14-74-6	1970333	PRJNA379596	379596	Terrabacteria group	Actinobacteria	2.0853	73.5	-	NCKG01	387	2157	2049	8/16/17	8/16/17	Scaffold	None	SAMN06622196	GCA_002279095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/095/GCA_002279095.1_ASM227909v1	-	-
Methylophaga sp. UBA2696	1946879	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.7948	44.2	-	DELM01	325	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451355	GCA_002354415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/415/GCA_002354415.1_ASM235441v1	28894102	-
Mesorhizobium sp. L103C120A0	1287086	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.61309	62.6	-	AYXD01	47	6510	6046	12/3/13	4/9/17	Contig	University of Southern California	SAMN02359651	GCA_000502255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/255/GCA_000502255.1_Mloti_L103C120A0	-	L103C120A0
Variovorax sp. WDL1	207745	PRJNA298504	298504	Proteobacteria	Betaproteobacteria	8.14522	66.4	-	LMTS01	352	7985	7376	1/26/16	4/17/17	Scaffold	KU Leuven	SAMN04159839	GCA_001541225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/225/GCA_001541225.1_ASM154122v1	-	WDL1
Xanthomonas translucens pv. graminis	134874	PRJEB10862	357900	Proteobacteria	Gammaproteobacteria	4.18732	68.8	-	FLUK01	300	3573	3276	12/16/16	4/6/17	Contig	CEBITEC	SAMEA4072397	GCA_900092565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/565/GCA_900092565.1_3709	-	-
Snodgrassella alvi	1196083	PRJNA339423	339423	Proteobacteria	Betaproteobacteria	2.50099	41.2	-	NAHA01	90	2302	2194	4/13/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603556	GCA_002088695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/695/GCA_002088695.1_ASM208869v1	-	A-11-12
Microbacterium sp. Root322	1736514	PRJNA297942	297942	Terrabacteria group	Actinobacteria	3.60121	68.5	-	LMCS01	3	3461	3377	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155783	GCA_001425645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/645/GCA_001425645.1_Root322	26633631	Root322
Cupriavidus sp. OV038	1855313	PRJEB17138	351310	Proteobacteria	Betaproteobacteria	5.96167	66.8	-	FOKX01	28	5389	5249	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216321	GCA_900112215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/215/GCA_900112215.1_IMG-taxon_2609459743_annotated_assembly	-	OV038
Mycobacterium fortuitum	1766	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.21094	66.3	-	MBEK01	167	6070	5839	1/18/17	4/6/17	Contig	JCVI	SAMN04634272	GCA_001954035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/035/GCA_001954035.1_ASM195403v1	-	NS-7455
Elizabethkingia meningoseptica	238	PRJEB14302	358788	FCB group	Bacteroidetes/Chlorobi group	3.98045	36.3	-	FTPF01	25	3611	3507	1/19/17	5/31/17	Scaffold	INSTITUT PASTEUR	SAMEA50779918	GCA_900156965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/965/GCA_900156965.1_ASM90015696v1	-	-
uncultured Blautia sp.	765821	PRJEB10915	297013	Terrabacteria group	Firmicutes	4.2544	42.7	-	FMFA01	73	3829	3768	8/16/16	8/16/16	Scaffold	SC	SAMEA3545252	GCA_900066165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/165/GCA_900066165.1_13414_6_28	-	-
Blastomonas sp. CCH9-A1	1768738	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	4.20013	64.2	-	LSHM01	80	4065	3916	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299409	GCA_001557175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/175/GCA_001557175.1_ASM155717v1	-	CCH9-A1
Raoultella ornithinolytica	54291	PRJNA261322	261322	Proteobacteria	Gammaproteobacteria	6.09446	55	-	JXXF01	800	5899	5438	3/2/15	4/3/17	Scaffold	Technical University of Denmark	SAMN03072844	GCA_000935285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/285/GCA_000935285.1_ASM93528v1	-	BAL286
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.78993	58.8	-	LNWQ01	62	4591	4447	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339854	GCA_001681535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/535/GCA_001681535.1_ASM168153v1	-	F4122
Curtobacterium sp. MMLR14_006	1898742	PRJNA342146	342146	Terrabacteria group	Actinobacteria	3.60175	72	-	MJGU01	26	3378	3275	11/2/16	4/13/17	Scaffold	Massachusetts Institute of Technology	SAMN05736483	GCA_001864985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/985/GCA_001864985.1_ASM186498v1	-	MMLR14_006
Streptomyces rimosus subsp. rimosus	132474	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.66321	71.9	-	JOEO01	183	8513	8096	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645240	GCA_000721045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/045/GCA_000721045.1_ASM72104v1	-	NRRL B-2626
Butyrivibrio sp. NC2002	1410610	PRJNA223497	223497	Terrabacteria group	Firmicutes	3.40727	40.2	-	JNKZ01	8	2983	2880	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841201	GCA_000702265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/265/GCA_000702265.1_ASM70226v1	-	NC2002
Ensifer sp. LC384	1120653	PRJNA328912	328912	Proteobacteria	Alphaproteobacteria	7.0337	61.8	-	MBST01	92	6694	6386	7/28/16	4/13/17	Contig	Monash University Malaysia	SAMN05384005	GCA_001695865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/865/GCA_001695865.1_LC384_v1	-	LC384
Leifsonia sp. CL154	1798214	PRJEB16116	348595	Terrabacteria group	Actinobacteria	3.77587	69.2	-	FNXD01	39	3480	3312	10/27/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04515694	GCA_900108465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/465/GCA_900108465.1_IMG-taxon_2639762567_annotated_assembly	-	CL154
Sphingopyxis sp. H012	1759065	PRJNA294421	294421	Proteobacteria	Alphaproteobacteria	5.05628	64.7	-	LNRS01	32	4786	4639	12/15/15	4/11/17	Contig	US EPA	SAMN04252878	GCA_001468235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/235/GCA_001468235.1_ASM146823v1	-	H012
uncultured Faecalibacterium sp.	259315	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.67339	55.8	-	FMFG01	112	2507	2446	8/16/16	8/16/16	Scaffold	SC	SAMEA3545278	GCA_900066275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/275/GCA_900066275.1_13414_6_54	-	-
uncultured Roseburia sp.	512314	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.4524	42.4	-	FMFO01	16	3142	3084	8/16/16	8/16/16	Scaffold	SC	SAMEA3545351	GCA_900066595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/595/GCA_900066595.1_14207_7_10	-	-
Salinivibrio sp. MA351	1909453	PRJNA368798	368798	Proteobacteria	Gammaproteobacteria	3.30885	49.4	-	MUFG01	59	3048	2911	2/14/17	2/22/17	Contig	Universidad de Sevilla	SAMN06272993	GCA_001996065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/065/GCA_001996065.1_ASM199606v1	-	MA351
Endomicrobium proavitum	1408281	PRJNA222699	222699	Elusimicrobia	Endomicrobia	1.58898	39.3	chromosome:NZ_CP009498.1/CP009498.1	-	1	1396	1337	6/12/15	4/10/17	Complete Genome	Max Planck Institute (MPI) for Terrestrial Microbiology	SAMN03771261	GCA_001027545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/545/GCA_001027545.1_ASM102754v1	26184928	Rsa215
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.63394	35.7	-	LZGT01	106	2460	2276	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179598	GCA_001690525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/525/GCA_001690525.1_ASM169052v1	-	App6-5
Lysinibacillus sp. BC-43	1500269	PRJEB17553	352020	Terrabacteria group	Firmicutes	4.69281	37.3	-	FOZT01	39	4621	4424	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02787099	GCA_900116155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/155/GCA_900116155.1_IMG-taxon_2585428101_annotated_assembly	-	BC-43
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.10764	42.2	-	FTQF01	3	996	922	3/18/17	3/24/17	Contig	Functional Genomics Genter Zurich	SAMEA4555938	GCA_900149565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/565/GCA_900149565.1_11-17b	-	-
Devosia sp. 66-14	1895752	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	5.71997	65.7	-	MKVB01	13	5574	5411	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660596	GCA_001899085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/085/GCA_001899085.1_ASM189908v1	-	-
Bosea sp. 32-68-6	1970325	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	3.53818	68.1	-	NCDO01	646	3927	3599	8/16/17	8/16/17	Scaffold	None	SAMN06622370	GCA_002280235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/235/GCA_002280235.1_ASM228023v1	-	-
Vibrio metoecus	1481663	PRJNA243626	243626	Proteobacteria	Gammaproteobacteria	3.96318	46.9	-	JJMN01	74	3553	2820	5/29/14	7/23/14	Contig	University of Alberta	SAMN02719547	GCA_000696385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/385/GCA_000696385.1_OP3Hv1	24972615	OP3H
Klebsiella michiganensis	1134687	PRJNA284628	284628	Proteobacteria	Gammaproteobacteria	6.35256	55.8	-	LDJW01	85	6283	5953	6/16/15	2/21/17	Contig	Federal Insitute for Risk Assessment	SAMN03704192	GCA_001028875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/875/GCA_001028875.1_ASM102887v1	-	PHS-892
Achromobacter sp. ATCC8750	1806488	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	4.03996	56.7	-	CYTB01	24	3759	3660	9/19/15	4/11/17	Scaffold	SC	SAMEA2247602	GCA_001298815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/815/GCA_001298815.1_11861_6_28	-	ATCC 8750
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	6.95514	44.1	-	MPTP01	104	6096	5950	1/18/17	4/6/17	Contig	Cornell University	SAMN05772525	GCA_001954655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/655/GCA_001954655.1_ASM195465v1	-	FSL H7-0718
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.56511	50.8	-	MPRS01	86	2506	2407	3/6/17	3/9/17	Contig	Harvard University	SAMN06016290	GCA_002021195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/195/GCA_002021195.1_ASM202119v1	-	-
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.76851	32.3	-	FQMP01	12	2750	2580	11/24/16	4/5/17	Contig	SC	SAMEA3449078	GCA_900126585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/585/GCA_900126585.1_17175_3_22	-	3688STDY6125070
Klebsiella quasipneumoniae	1463165	PRJNA336228	336228	Proteobacteria	Gammaproteobacteria	6.03975	56.9	-	MDCA01	74	6190	5760	8/29/16	2/21/17	Contig	IOC- FIOCRUZ	SAMN05505619	GCA_001715345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/345/GCA_001715345.1_ASM171534v1	-	CCBH16302
Lactobacillus parabuchneri	152331	PRJNA357007	357007	Terrabacteria group	Firmicutes	2.79911	43.2	-	MSBD01	130	2712	2518	4/18/17	4/21/17	Scaffold	University of Bern	SAMN06130984	GCA_002095825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/825/GCA_002095825.1_ASM209582v1	28261177	FAM23169
Lactobacillus taiwanensis	508451	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.08227	34	-	NGOS01	120	2027	1822	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848412	GCA_002253465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/465/GCA_002253465.1_ASM225346v1	-	107v
Enterobacter kobei	208224	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.56784	55.2	-	LRCM01	108	4427	4177	1/19/16	4/4/17	Contig	JCVI	SAMN04407783	GCA_001518245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/245/GCA_001518245.1_ASM151824v1	-	GN03848
Enterobacter xiangfangensis	1296536	PRJNA312133	312133	Proteobacteria	Gammaproteobacteria	4.425	55.6	-	LSTS01	23	4302	4117	5/13/16	4/5/17	Scaffold	Institute of Microbial Technology	SAMN04494563	GCA_001643165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/165/GCA_001643165.1_ASM164316v1	-	RDT3
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.22712	66.5	-	LPFQ01	156	6694	6356	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449490	GCA_001530725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/725/GCA_001530725.1_ASM153072v1	-	MSMB1502WGS
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.93018	67.5	-	LPFH01	96	7138	6780	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449481	GCA_001529545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/545/GCA_001529545.1_ASM152954v1	-	MSMB1470WGS
Syntrophomonas sp. UBA4968	1947627	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.93114	46.9	-	DGZY01	132	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450670	GCA_002397225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/225/GCA_002397225.1_ASM239722v1	28894102	-
Proteiniphilum sp. UBA1028	1947251	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.57356	45.7	-	DCEN01	89	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06455214	GCA_002316955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/955/GCA_002316955.1_ASM231695v1	28894102	-
Enterobacter cloacae complex 'Hoffmann cluster IV'	1812935	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.91731	55.8	-	JVND01	176	4818	4538	7/10/15	4/20/17	Scaffold	University of Washington	SAMN03197473	GCA_001054835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/835/GCA_001054835.1_ASM105483v1	26230489	28_ECLO
Polynucleobacter sp. UBA962	1947079	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	1.68292	45.7	-	DBCI01	132	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456954	GCA_002292975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/975/GCA_002292975.1_ASM229297v1	28894102	-
Oleiphilus sp. HI0118	1822262	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	6.56089	47.6	-	LWGB01	2826	6016	5064	5/2/16	5/2/16	Contig	Massachusetts Institute of Technology	SAMN04580801	GCA_001635265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/265/GCA_001635265.1_ASM163526v1	-	HI0118
Lachnoclostridium sp. UBA1434	1946685	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.90713	43.2	-	DCTS01	115	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453857	GCA_002329645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/645/GCA_002329645.1_ASM232964v1	28894102	-
Gilliamella sp. N-G4	1970473	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.43625	34.6	-	NASV01	142	2255	2148	5/16/17	5/24/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603546	GCA_002142255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/255/GCA_002142255.1_ASM214225v1	-	N-G4
Fibrobacter sp. UWT2	1896224	PRJEB18364	355802	FCB group	Fibrobacteres	3.49357	50.2	-	FRBF01	49	2805	2699	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05720487	GCA_900142545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/545/GCA_900142545.1_IMG-taxon_2700988690_annotated_assembly	-	UWT2
Archaeoglobus sp. JdFR-35	1934992	PRJNA269163	269163	Euryarchaeota	Archaeoglobi	1.70339	41.3	-	MTMW01	167	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226352	GCA_002011315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/315/GCA_002011315.1_ASM201131v1	28350381	-
Xanthomonas axonopodis pv. manihotis str. IBSBF 1994	1185672	PRJNA163739	163739	Proteobacteria	Gammaproteobacteria	4.77452	65.1	-	AKDD01	677	4547	3829	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090308	GCA_000265905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/905/GCA_000265905.1_IBSBF1994	22699502	IBSBF 1994
Catabacter sp. UBA1782	1946249	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.27286	45.6	-	DCGI01	108	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06457768	GCA_002315475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/475/GCA_002315475.1_ASM231547v1	28894102	-
Candidatus Microthrix sp. UBA1616	1946158	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.41366	43.4	-	DCMS01	80	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454488	GCA_002321535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/535/GCA_002321535.1_ASM232153v1	28894102	-
Candidatus Microthrix sp. UBA1522	1946157	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.35709	50.7	-	DCQI01	212	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453430	GCA_002323415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/415/GCA_002323415.1_ASM232341v1	28894102	-
Catabacter sp. UBA1750	1946248	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.6528	54.8	-	DCHO01	83	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453547	GCA_002315655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/655/GCA_002315655.1_ASM231565v1	28894102	-
Xanthomonas axonopodis pv. manihotis str. IBSBF 2345	1185673	PRJNA163741	163741	Proteobacteria	Gammaproteobacteria	4.81977	65.2	-	AKDE01	128	4250	3929	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090309	GCA_000265925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/925/GCA_000265925.1_IBSBF2345	22699502	IBSBF 2345
Archaeoglobus sp. JdFR-38	1934995	PRJNA269163	269163	Euryarchaeota	Archaeoglobi	1.02549	44.5	-	MTMZ01	99	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226355	GCA_002011335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/335/GCA_002011335.1_ASM201133v1	28350381	-
Fibrobacter sp. UWB7	1896206	PRJEB18404	355839	FCB group	Fibrobacteres	3.81226	47.9	-	FRCO01	12	3133	3021	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05720467	GCA_900142945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/945/GCA_900142945.1_IMG-taxon_2703719236_annotated_assembly	-	UWB7
Gilliamella sp. N-W3	1970474	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.67496	34.4	-	NASW01	90	2538	2437	5/16/17	5/24/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603548	GCA_002142275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/275/GCA_002142275.1_ASM214227v1	-	N-W3
Oleiphilus sp. HI0122	1822264	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	6.03924	47.5	-	LWGD01	2490	5476	4622	5/2/16	5/2/16	Contig	Massachusetts Institute of Technology	SAMN04580803	GCA_001635305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/305/GCA_001635305.1_ASM163530v1	-	HI0122
Thalassolituus sp. UBA3500	1947664	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.60598	51.1	-	DFQB01	60	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450556	GCA_002377545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/545/GCA_002377545.1_ASM237754v1	28894102	-
Polynucleobacter sp. UBA655	1947078	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	1.56343	49.5	-	DBOD01	173	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06454999	GCA_002299505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/505/GCA_002299505.1_ASM229950v1	28894102	-
Enterobacter cloacae complex 'Hoffmann cluster IV'	1812935	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.94507	55.8	-	JVMT01	154	4888	4570	7/10/15	4/20/17	Scaffold	University of Washington	SAMN03197483	GCA_001056255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/255/GCA_001056255.1_ASM105625v1	26230489	29_ECLO
Proteiniphilum sp. UBA1027	1947250	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.72432	40.9	-	DCEO01	103	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06457515	GCA_002316995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/995/GCA_002316995.1_ASM231699v1	28894102	-
Syntrophomonas sp. UBA4911	1947625	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.00911	47.1	-	DHCD01	117	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450505	GCA_002398105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/105/GCA_002398105.1_ASM239810v1	28894102	-
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.53687	67.6	-	LPFM01	75	6860	6507	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449486	GCA_001529625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/625/GCA_001529625.1_ASM152962v1	-	MSMB1487WGS
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.79174	66.8	-	LPGS01	70	6214	5938	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449518	GCA_001530925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/925/GCA_001530925.1_ASM153092v1	-	MSMB1840WGS
Enterobacter kobei	208224	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.76378	55	-	LRBY01	92	4673	4411	1/19/16	4/4/17	Contig	JCVI	SAMN04407765	GCA_001518525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/525/GCA_001518525.1_ASM151852v1	-	GN02618
Lactobacillus taiwanensis	508451	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.07797	34	-	NGOT01	78	2055	1838	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848411	GCA_002253475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/475/GCA_002253475.1_ASM225347v1	-	107u
Lactobacillus parabuchneri	152331	PRJNA357007	357007	Terrabacteria group	Firmicutes	2.56764	43.5	-	MSAX01	38	2435	2280	4/18/17	4/21/17	Scaffold	University of Bern	SAMN06130978	GCA_002095835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/835/GCA_002095835.1_ASM209583v1	28261177	FAM23163
Klebsiella quasipneumoniae	1463165	PRJNA353361	353361	Proteobacteria	Gammaproteobacteria	5.52692	57.6	-	MSZK01	171	5613	5185	5/9/17	5/22/17	Contig	New Jersey Medical School-Rutgers University	SAMN06200341	GCA_002119945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/945/GCA_002119945.1_ASM211994v1	-	KP025
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.74513	32.3	-	FQMQ01	14	2730	2555	11/24/16	4/6/17	Contig	SC	SAMEA3449079	GCA_900126595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/595/GCA_900126595.1_17175_3_23	-	3688STDY6125071
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.82713	50.6	-	MPNX01	84	2773	2660	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016235	GCA_002019535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/535/GCA_002019535.1_ASM201953v1	-	-
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	6.96453	44.2	-	MPTK01	94	6092	5933	1/18/17	4/6/17	Contig	Cornell University	SAMN05772530	GCA_001954665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/665/GCA_001954665.1_ASM195466v1	-	FSL H3-0287
Achromobacter sp. 2789STDY5608614	1806498	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	6.37781	67.7	-	CYUB01	73	5845	5598	9/19/15	4/11/17	Scaffold	SC	SAMEA2247579	GCA_001298835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/835/GCA_001298835.1_11861_6_7	-	2789STDY5608614
Klebsiella michiganensis	1134687	PRJNA284626	284626	Proteobacteria	Gammaproteobacteria	6.35462	55.8	-	LDJV01	86	6282	5954	6/16/15	2/21/17	Contig	Federal Insitute for Risk Assessment	SAMN03704191	GCA_001028885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/885/GCA_001028885.1_ASM102888v1	26205867	PHS-890
Vibrio metoecus	1481663	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.94636	46.9	-	LCUD01	84	3559	3047	10/22/15	10/22/15	Contig	University of Alberta	SAMN03610458	GCA_001402155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/155/GCA_001402155.1_ASM140215v1	26454015	Jun-78
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.09658	42.2	-	FTQD01	2	979	914	3/18/17	3/24/17	Contig	Functional Genomics Genter Zurich	SAMEA4555933	GCA_900149575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/575/GCA_900149575.1_1-28b	-	-
Lysinibacillus sp. SG55	1500270	PRJEB17538	351984	Terrabacteria group	Firmicutes	4.58808	37.7	-	FOZQ01	38	4460	4240	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02787087	GCA_900116165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/165/GCA_900116165.1_IMG-taxon_2585428103_annotated_assembly	-	SG55
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.55159	35	-	LZHC01	98	2417	2237	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179599	GCA_001690535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/535/GCA_001690535.1_ASM169053v1	-	Bif1-4
Candidatus Mycoplasma haemolamae str. Purdue	1212765	PRJNA68151	68151	Terrabacteria group	Tenericutes	0.756845	39.3	chromosome:CP003731.1	-	1	961	925	7/24/12	1/31/14	Complete Genome	Purdue University	SAMN02603732	GCA_000281235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/235/GCA_000281235.1_ASM28123v1	-	Purdue
Salinivibrio sp. PR5	1909484	PRJNA368803	368803	Proteobacteria	Gammaproteobacteria	3.45602	50	-	MUFK01	105	3205	3041	2/14/17	2/23/17	Contig	Universidad de Sevilla	SAMN06273022	GCA_001996085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/085/GCA_001996085.1_ASM199608v1	-	PR5
Sphingopyxis sp. H050	1759072	PRJNA294421	294421	Proteobacteria	Alphaproteobacteria	4.36323	65.1	-	LNRZ01	23	4203	4098	12/15/15	4/11/17	Contig	US EPA	SAMN04255394	GCA_001468265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/265/GCA_001468265.1_ASM146826v1	-	H050
Leifsonia sp. CL147	1798215	PRJEB17459	351612	Terrabacteria group	Actinobacteria	3.77531	69.2	-	FOTM01	38	3480	3314	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04515692	GCA_900114565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/565/GCA_900114565.1_IMG-taxon_2639762526_annotated_assembly	-	CL147
Ensifer sp. LC499	1120654	PRJNA328912	328912	Proteobacteria	Alphaproteobacteria	6.21748	62.2	-	MBSU01	73	5860	5662	7/28/16	4/13/17	Contig	Monash University Malaysia	SAMN05384006	GCA_001695895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/895/GCA_001695895.1_LC499_v1	-	LC499
Butyrivibrio sp. AE2015	1280663	PRJNA185678	185678	Terrabacteria group	Firmicutes	3.71156	39.9	-	ATVR01	73	3209	3099	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02440908	GCA_000420825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/825/GCA_000420825.1_ASM42082v1	-	AE2015
Streptomyces rimosus subsp. rimosus	132474	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.0225	71.7	-	JOET01	1075	8638	8194	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645245	GCA_000721085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/085/GCA_000721085.1_ASM72108v1	-	NRRL B-2661
Curtobacterium sp. MMLR14_010	1898743	PRJNA342146	342146	Terrabacteria group	Actinobacteria	3.9015	71.1	-	MJGV01	110	3635	3527	11/2/16	4/13/17	Scaffold	Massachusetts Institute of Technology	SAMN05736487	GCA_001865015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/015/GCA_001865015.1_ASM186501v1	-	MMLR14_010
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.85514	58.9	-	LNWS01	47	4631	4506	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339856	GCA_001681595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/595/GCA_001681595.1_ASM168159v1	-	G1303
Raoultella ornithinolytica	54291	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.68631	55.6	-	JURX01	251	5489	5254	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03198025	GCA_001066395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/395/GCA_001066395.1_ASM106639v1	26230489	811_RORN
Blastomonas sp. CCH8-E1	1768736	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	4.01259	64.5	-	LSHK01	120	3916	3774	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299407	GCA_001557185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/185/GCA_001557185.1_ASM155718v1	-	CCH8-E1
uncultured Blautia sp.	765821	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.67582	43.9	-	FMFK01	25	3358	3297	8/16/16	8/16/16	Scaffold	SC	SAMEA3545256	GCA_900066205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/205/GCA_900066205.1_13414_6_32	-	-
Elizabethkingia meningoseptica	238	PRJEB14302	358788	FCB group	Bacteroidetes/Chlorobi group	3.84173	36.6	-	FTRA01	95	3470	3359	1/20/17	5/31/17	Scaffold	INSTITUT PASTEUR	SAMEA4026802	GCA_900156975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/975/GCA_900156975.1_ASM90015697v1	-	58-80
Mycobacterium fortuitum	1766	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.6422	66	-	MBER01	190	6497	6245	1/18/17	4/6/17	Contig	JCVI	SAMN04634280	GCA_001954145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/145/GCA_001954145.1_ASM195414v1	-	GA-0871
Cupriavidus sp. OV096	1855314	PRJEB17244	351426	Proteobacteria	Betaproteobacteria	5.96044	66.8	-	FOWM01	27	5391	5252	10/30/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216322	GCA_900115455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/455/GCA_900115455.1_IMG-taxon_2615840602_annotated_assembly	-	OV096
Microbacterium sp. Root1433D1	1736463	PRJNA297942	297942	Terrabacteria group	Actinobacteria	3.56396	68.5	-	LMFN01	6	3433	3349	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155732	GCA_001426835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/835/GCA_001426835.1_Root1433D1	26633631	Root1433D1
Snodgrassella alvi	1196083	PRJNA339423	339423	Proteobacteria	Betaproteobacteria	2.50229	41.2	-	NAHB01	58	2302	2192	4/13/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603557	GCA_002088735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/735/GCA_002088735.1_ASM208873v1	-	A-1-12
Xanthomonas translucens pv. graminis	134874	PRJNA290469	290469	Proteobacteria	Gammaproteobacteria	4.34032	68.3	-	LHSI01	2	3818	3450	8/18/15	4/4/17	Scaffold	French Network on Xanthomonads (FNX)	SAMN03892232	GCA_001269865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/865/GCA_001269865.1_Xtg-CFBP2053-G1	26450740	CFBP 2053
Variovorax sp. EL159	1566270	PRJEB16049	348481	Proteobacteria	Betaproteobacteria	7.00465	66.7	-	FMUJ01	16	6482	6342	10/17/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159363	GCA_900100965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/965/GCA_900100965.1_IMG-taxon_2608642243_annotated_assembly	-	EL159
Mesorhizobium sp. L103C131B0	1287089	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.59153	62.5	-	AYXC01	67	6428	5984	12/3/13	4/9/17	Contig	University of Southern California	SAMN02359652	GCA_000502275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/275/GCA_000502275.1_Mloti_L103C131B0	-	L103C131B0
Methylophaga sp. UBA2689	1946878	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.89597	44.6	-	DELT01	111	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06453890	GCA_002354555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/555/GCA_002354555.1_ASM235455v1	28894102	-
Chryseobacterium sp. 6021061333	1816690	PRJEB19812	377948	FCB group	Bacteroidetes/Chlorobi group	4.86468	38.9	-	FWDI01	4	4375	4257	3/18/17	4/3/17	Scaffold	URMITE	SAMEA103587418	GCA_900169075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/075/GCA_900169075.1_PRJEB19812	-	6021061333
Rhizobium sp. N541	1703970	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.86089	61.4255	chromosome RspN541:NZ_CP013636.1/CP013636.1; plasmid pRspN541a:NZ_CP013637.1/CP013637.1; plasmid pRspN541b:NZ_CP013638.1/CP013638.1; plasmid pRspN541d:NZ_CP013641.1/CP013641.1; plasmid pRspN541e:NZ_CP013642.1/CP013642.1	-	7	6615	6268	6/17/16	4/13/17	Chromosome	Centro de Ciencias Genomicas UNAM	SAMN03998647	GCA_001675095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/095/GCA_001675095.1_ASM167509v1	-	N541
Idiomarina sp. UBA4520	1946647	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.47462	47.1	-	DGMK01	22	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456082	GCA_002388365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/365/GCA_002388365.1_ASM238836v1	28894102	-
Halomonas sp. TG39a	1415755	PRJNA225846	225846	Proteobacteria	Gammaproteobacteria	4.97919	55	-	JQLV01	2	4556	4400	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02744764	GCA_000744395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/395/GCA_000744395.1_ASM74439v1	26184945	TG39a
Sphingobium sp. D43FB	2017595	PRJNA392681	392681	Proteobacteria	Alphaproteobacteria	5.01872	62.5	-	NMUA01	327	4734	4458	9/19/17	9/21/17	Contig	Universidad Andres Bello	SAMN07304726	GCA_002312805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/805/GCA_002312805.1_ASM231280v1	28894442	D43FB
Rothia sp. HMSC068E02	1739423	PRJNA300073	300073	Terrabacteria group	Actinobacteria	2.29664	59.5	-	LTWL01	35	1795	1705	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480346	GCA_001813565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/565/GCA_001813565.1_ASM181356v1	-	HMSC068E02
Sphingobacterium sp. UBA1575	1947482	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.72371	40.3	-	DCOH01	66	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454428	GCA_002322865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/865/GCA_002322865.1_ASM232286v1	28894102	-
Pseudonocardia sp. CNS-139	1904968	PRJNA344658	344658	Terrabacteria group	Actinobacteria	7.12539	74.2	-	MKJX01	250	7401	4828	1/11/17	8/8/17	Scaffold	"Scripps Institution of Oceanography, UCSD"	SAMN05830206	GCA_001942415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/415/GCA_001942415.1_ASM194241v1	27902408	CNS-139
Neisseria sp. HMSC070A01	1715190	PRJNA296318	296318	Proteobacteria	Betaproteobacteria	2.21268	49.5	-	LTII01	26	2178	2068	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477548	GCA_001810165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/165/GCA_001810165.1_ASM181016v1	-	HMSC070A01
Campylobacter sp. 109	2039341	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.66694	30.6	-	NXBC01	36	1722	1611	9/27/17	9/27/17	Contig	University of California at Davis	SAMN05711874	GCA_002383905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/905/GCA_002383905.1_ASM238390v1	-	109
Alistipes sp. 56_sp_Nov_56_25	1896969	PRJNA321218	321218	FCB group	Bacteroidetes/Chlorobi group	3.15987	58.7	-	MNQF01	67	2590	2424	12/23/16	12/23/16	Scaffold	None	SAMN05717211	GCA_001915285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/285/GCA_001915285.1_ASM191528v1	27819664	-
Propionibacterium sp. 409-HC1	936047	PRJNA64685	64685	Terrabacteria group	Actinobacteria	2.52853	60.1	-	AFIK01	111	2605	2309	5/23/11	4/17/17	Contig	J. Craig Venter Institute	SAMN00255231	GCA_000214515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/515/GCA_000214515.2_ASM21451v1	-	409-HC1
Desulfovibrio sp. UBA728	1961410	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	3.11972	52.5	-	DBLI01	330	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452898	GCA_002298725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/725/GCA_002298725.1_ASM229872v1	28894102	-
Actinomyces sp. HMSC064C12	1739355	PRJNA300005	300005	Terrabacteria group	Actinobacteria	2.40248	56.3	-	LTEK01	50	2195	2106	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477660	GCA_001812345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/345/GCA_001812345.1_ASM181234v1	-	HMSC064C12
Prochlorococcus sp. HOT208_60m_813O14	1961094	PRJNA375759	375759	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.35374	31.3	-	MWOO01	248	1509	1359	3/14/17	3/16/17	Scaffold	Massachusetts Institute of Technology	SAMN06345454	GCA_002025945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/945/GCA_002025945.1_ASM202594v1	-	HOT208_60m_813O14
Shigella sp. FC2833	1890306	PRJNA338859	338859	Proteobacteria	Gammaproteobacteria	4.51435	50.8	-	MDJL01	543	4843	4197	8/26/16	8/26/16	Contig	Christian Medical College	SAMN05572632	GCA_001714955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/955/GCA_001714955.1_ASM171495v1	-	FC2833
Exiguobacterium sp. JLM-2	1647415	PRJNA282364	282364	Terrabacteria group	Firmicutes	2.89997	48.3081	plasmid unnamed:NZ_CM003312.1/CM003312.1	LDNY01	10	3000	2929	6/15/15	4/10/17	Scaffold	"Institute of Oceanology, Chinese Academy of Sciences"	SAMN03568901	GCA_001027905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/905/GCA_001027905.1_ASM102790v1	26205856	JLM-2
Bacteroides sp. Ga6A2	1410608	PRJNA223492	223492	FCB group	Bacteroidetes/Chlorobi group	3.85039	45.1	-	JNKX01	82	3225	3048	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841199	GCA_000702225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/225/GCA_000702225.1_ASM70222v1	-	Ga6A2
Thioalkalivibrio sp. AKL9	1158157	PRJNA178480	178480	Proteobacteria	Gammaproteobacteria	2.82289	66.3	-	ARJB01	29	2790	2643	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441338	GCA_000377825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/825/GCA_000377825.1_ASM37782v1	-	AKL9
Ruminococcus sp. CAG:379	1262956	PRJEB857	206728	Terrabacteria group	Firmicutes	2.16491	54.2	-	CBHF01	144	1979	1950	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138600	GCA_000434255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/255/GCA_000434255.1_MGS379	-	-
Paenibacillus sp. UNCCL52	1449064	PRJNA234959	234959	Terrabacteria group	Firmicutes	5.91325	45.6	-	JMLR01	35	5204	4947	5/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743356	GCA_000686825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/825/GCA_000686825.1_ASM68682v1	-	UNCCL52
Stenotrophomonas sp. 69-14	1895856	PRJNA279279	279279	Proteobacteria	Gammaproteobacteria	3.69371	69.3	-	MKWK01	27	3280	3157	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660631	GCA_001899865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/865/GCA_001899865.1_ASM189986v1	-	-
Brevundimonas sp. UBA992	1946145	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.64654	66.2	-	DBBE01	322	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452150	GCA_002292005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/005/GCA_002292005.1_ASM229200v1	28894102	-
Alcanivorax sp. Nap_24	1795868	PRJNA301966	301966	Proteobacteria	Gammaproteobacteria	2.70426	65.3	-	LSMO01	110	2537	2417	2/23/16	2/23/16	Contig	The University of Texas at Austin	SAMN04458021	GCA_001566785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/785/GCA_001566785.1_ASM156678v1	-	-
Eubacterium sp. CAG:248	1262885	PRJEB785	206681	Terrabacteria group	Firmicutes	2.61891	35.8	-	CBDZ01	107	2214	2193	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138708	GCA_000436475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/475/GCA_000436475.1_MGS248	-	-
Janthinobacterium sp. GW458P	1981504	PRJNA383021	383021	Proteobacteria	Betaproteobacteria	6.28479	63.3	-	NEGZ01	156	5684	5393	5/11/17	5/22/17	Scaffold	Lawrence Berkeley National Laboratory	SAMN06758628	GCA_002127585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/585/GCA_002127585.1_ASM212758v1	-	GW458P
Caulobacter sp. JGI 0001002-P11	1094930	PRJNA176063	176063	Proteobacteria	Alphaproteobacteria	0.257202	66.3	-	AUOD02	25	-	-	7/16/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440696	GCA_000464035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/035/GCA_000464035.2_ASM46403v2	-	JGI 0001002-P11
Psychrobacter sp. TB47	985259	PRJNA228382	228382	Proteobacteria	Gammaproteobacteria	3.54418	43.4	-	AYXZ01	170	3032	2676	12/18/13	4/17/17	Scaffold	University of Florence	SAMN02597461	GCA_000511045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/045/GCA_000511045.1_PsyTB47_v1.0	-	TB47
Acidovorax sp. CF316	1144317	PRJNA83057	83057	Proteobacteria	Betaproteobacteria	7.08623	67.8	-	AKJX01	315	6682	6383	7/9/12	5/18/17	Contig	Oak Ridge National Lab	SAMN00839625	GCA_000276605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/605/GCA_000276605.1_Acidovorax.strCF316_v1.0	23045501	CF316
Marinobacter sp. DSM 26291	1761792	PRJEB17473	351678	Proteobacteria	Gammaproteobacteria	4.4922	57	-	FOTV01	53	4164	4022	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487868	GCA_900114695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/695/GCA_900114695.1_IMG-taxon_2619618959_annotated_assembly	-	DSM 26291
Erythrobacter sp. REDSEA-S37_B3	1811535	PRJNA289734	289734	Proteobacteria	Alphaproteobacteria	2.79363	63.5	-	LUNT01	94	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534569	GCA_001626365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/365/GCA_001626365.1_ASM162636v1	27377622	-
Nocardioides sp. XL1	2003120	PRJNA387066	387066	Terrabacteria group	Actinobacteria	5.2365	71.5	-	NHQT01	81	5067	4896	6/2/17	6/5/17	Scaffold	The University of Iowa	SAMN07138958	GCA_002165235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/235/GCA_002165235.1_ASM216523v1	-	XL1
Methylobacterium sp. Leaf119	1736261	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	5.4238	68.2	-	LMNN01	25	5000	4751	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151641	GCA_001422935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/935/GCA_001422935.1_Leaf119	26633631	Leaf119
Citrobacter sp. L17	1212820	PRJNA171023	171023	Proteobacteria	Gammaproteobacteria	5.09267	51.8	-	AMPE01	63	5116	4842	11/21/12	5/18/17	Contig	Universiti Teknologi Malaysia	SAMN02471429	GCA_000313895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/895/GCA_000313895.1_L17dn	-	L17
Treponema sp. UBA764	1947753	PRJNA348753	348753	Spirochaetes	Spirochaetia	2.47104	36.4	-	DBJY01	87	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452385	GCA_002297195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/195/GCA_002297195.1_ASM229719v1	28894102	-
Novosphingobium sp. 28-62-57	1970409	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	4.10297	62.3	-	NCGO01	39	3818	3725	8/16/17	8/16/17	Contig	None	SAMN06622292	GCA_002256985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/985/GCA_002256985.1_ASM225698v1	-	-
Lactobacillus sp. HMSC073D04	1739528	PRJNA300179	300179	Terrabacteria group	Firmicutes	2.95562	46.6	-	LTSY01	58	2975	2746	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480443	GCA_001815435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/435/GCA_001815435.1_ASM181543v1	-	HMSC073D04
Enterococcus sp. HMSC072F07	1739372	PRJNA300022	300022	Terrabacteria group	Firmicutes	2.98001	37.6	-	LTYA01	294	3077	2913	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480036	GCA_001812645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/645/GCA_001812645.1_ASM181264v1	-	HMSC072F07
Prevotella sp. BV3P1	1111130	PRJNA89639	89639	FCB group	Bacteroidetes/Chlorobi group	2.79399	45.7	-	AWXC01	62	2314	2182	10/23/13	4/9/17	Contig	JCVI	SAMN02436400	GCA_000479005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/005/GCA_000479005.1_PspBV3P1v1.0	-	BV3P1
Pantoea sp. 1.19	1925589	PRJNA356250	356250	Proteobacteria	Gammaproteobacteria	3.79274	59.9	-	MRBS01	41	3568	3345	12/28/16	4/16/17	Contig	Embrapa	SAMN06111205	GCA_001922585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/585/GCA_001922585.1_ASM192258v1	-	1.19
Sulfurovum sp. enrichment culture clone C5	497650	PRJEB11632	304583	Proteobacteria	delta/epsilon subdivisions	1.6152	32.7	-	FAXN01	105	1737	1699	12/9/15	12/9/15	Contig	HELMHOLTZ CENTRE FOR ENVIRONMENTAL RESEARCH - UFZ	SAMEA3649936	GCA_001493195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/195/GCA_001493195.1_Zeitz_Epsilonproteobacterium	-	-
Polaromonas sp. 24-63-21	1970415	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	5.06682	62.7	-	NCHP01	59	4976	4838	8/16/17	8/16/17	Scaffold	None	SAMN06622265	GCA_002281895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/895/GCA_002281895.1_ASM228189v1	-	-
Serratia sp. S119	1118230	PRJNA342012	342012	Proteobacteria	Gammaproteobacteria	5.12207	59.9	-	MSFH01	48	4850	4691	2/3/17	4/17/17	Contig	Universidad Nacional de Rio Cuarto	SAMN05732388	GCA_001984565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/565/GCA_001984565.1_ASM198456v1	-	S119
Mycobacterium sp. UNC410CL29Cvi84	1449059	PRJNA234913	234913	Terrabacteria group	Actinobacteria	6.05268	67.1	-	JMLM01	30	5799	5646	5/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743380	GCA_000686745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/745/GCA_000686745.1_ASM68674v1	-	UNC410CL29Cvi84
Streptococcus sp. DD13	1777881	PRJNA304333	304333	Terrabacteria group	Firmicutes	1.71673	43.7	-	LQRH01	15	1629	1468	3/2/16	4/12/17	Scaffold	University of Kaiserslautern	SAMN04325020	GCA_001578875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/875/GCA_001578875.1_ASM157887v1	27303717	DD13
Bradyrhizobium sp. WSM1743	318996	PRJNA162991	162991	Proteobacteria	Alphaproteobacteria	8.34196	63.4	-	AXAZ01	163	7858	7222	9/30/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441116	GCA_000473065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/065/GCA_000473065.1_ASM47306v1	-	WSM1743
Shewanella sp. SACH	1873135	PRJNA352664	352664	Proteobacteria	Gammaproteobacteria	4.91908	46.5	-	MPDG02	49	4308	4121	11/28/16	6/4/17	Scaffold	Investigacion y Desarrollo Aplicado (I+DEA)	SAMN05990718	GCA_001887095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/095/GCA_001887095.2_ASM188709v2	-	SACH
Arthrobacter sp. 35W	1132441	PRJNA195713	195713	Terrabacteria group	Actinobacteria	4.6602	66.8	-	AXVQ01	4	4112	3971	10/25/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440772	GCA_000482545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/545/GCA_000482545.1_ASM48254v1	-	35W
Corynebacterium sp. DNF00584	1384076	PRJNA257375	257375	Terrabacteria group	Actinobacteria	2.69089	63.6	-	LSCZ01	46	2510	2380	2/8/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN04324902	GCA_001552965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/965/GCA_001552965.1_ASM155296v1	-	DNF00584
Staphylococcus sp. HMSC072H03	1715057	PRJNA296185	296185	Terrabacteria group	Firmicutes	2.21275	31.3	-	LTJZ01	59	2142	2065	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04495799	GCA_001809305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/305/GCA_001809305.1_ASM180930v1	-	HMSC072H03
Enterobacter sp. BIDMC 26	1329838	PRJNA202037	202037	Proteobacteria	Gammaproteobacteria	5.04404	54.3	-	JCLE01	4	4889	4679	2/3/14	4/10/17	Scaffold	Broad Institute	SAMN02138656	GCA_000534435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/435/GCA_000534435.1_Ente_cloa_complex_BIDMC_26_V1	-	BIDMC 26
Rhodococcus sp. P14	450821	PRJNA82321	82321	Terrabacteria group	Actinobacteria	5.66999	70.4	-	AJFC01	427	5369	4898	3/26/12	5/19/17	Contig	Shantou University	SAMN02470971	GCA_000256505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/505/GCA_000256505.1_ASM25650v1	22689235	P14
Acetobacterium woodii DSM 1030	931626	PRJNA60713	60713	Terrabacteria group	Firmicutes	4.04478	39.3	chromosome:NC_016894.1/CP002987.1	-	1	3657	3527	2/14/12	4/17/17	Complete Genome	Georg-August-University Goettingen	SAMN02603267	GCA_000247605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/605/GCA_000247605.1_ASM24760v1	22479398	DSM 1030
Sphingomonas sp. Leaf230	1735694	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.14379	65.2	-	LMKW01	15	3780	3657	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151690	GCA_001421745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/745/GCA_001421745.1_Leaf230	26633631	Leaf230
Clostridium sp. HMSC19B10	1581182	PRJNA269811	269811	Terrabacteria group	Firmicutes	4.05662	28.4	-	LWPG01	77	3723	3604	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436141	GCA_001806565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/565/GCA_001806565.1_ASM180656v1	-	HMSC19B10
Bacillus sp. FJAT-22090	1581038	PRJNA293650	293650	Terrabacteria group	Firmicutes	4.21529	35.7	chromosome:NZ_CP012601.1/CP012601.1	-	1	4255	4064	9/4/15	4/11/17	Chromosome	Fujian Academy of Agricultural Sciences	SAMN04009131	GCA_001278755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/755/GCA_001278755.1_ASM127875v1	-	FJAT-22090
Frankia sp. BMG5.30	1834514	PRJNA318444	318444	Terrabacteria group	Actinobacteria	5.81859	70.2	-	MOME01	95	4904	4542	2/1/17	4/17/17	Contig	"University of Tunis El Manar, Faculty of Sciences of Tunis"	SAMN04851312	GCA_001983005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/005/GCA_001983005.1_ASM198300v1	-	BMG5.30
Flavobacterium sp. VMW	1699134	PRJNA292091	292091	FCB group	Bacteroidetes/Chlorobi group	5.62709	33.6	-	LHVT01	59	4848	4726	8/31/15	4/11/17	Contig	GCAT-SEEK	SAMN03964777	GCA_001275605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/605/GCA_001275605.1_ASM127560v1	-	VMW
Klebsiella sp. S1	672443	PRJNA288071	288071	Proteobacteria	Gammaproteobacteria	5.20811	57.4	-	LFOB01	50	5223	5001	8/31/16	2/21/17	Contig	Harbin Medical University	SAMN03793168	GCA_001717795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/795/GCA_001717795.1_ASM171779v1	-	S1
Acinetobacter sp. CIP 102637	1144669	PRJNA183305	183305	Proteobacteria	Gammaproteobacteria	2.78402	42	-	APPG01	5	2725	2455	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01087910	GCA_000368425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/425/GCA_000368425.1_Acin_sp_CIP_102637_V1	-	CIP 102637
Bordetella holmesii CDC-H719-BH	1331210	PRJNA202122	202122	Proteobacteria	Betaproteobacteria	3.579	62.8	-	JGWA01	149	3627	3182	5/1/14	4/2/17	Contig	JCVI	SAMN02263915	GCA_000662255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/255/GCA_000662255.1_gbb14v01	24948754	CDC-H719-BH
Paeniclostridium sordellii	1505	PRJEB8138	277663	Terrabacteria group	Firmicutes	3.52859	27.3	-	CDNJ01	28	3427	3314	3/13/15	4/4/17	Contig	WTSI	SAMEA1572089	GCA_001372655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/655/GCA_001372655.1_JGS444	-	JGS444
Helicobacter pylori 2017	985081	PRJNA62769	62769	Proteobacteria	delta/epsilon subdivisions	1.54824	39.3	chromosome:NC_017374.1/CP002571.1	-	1	1548	1377	3/15/11	3/22/17	Complete Genome	"Pathogen Biology Laboratory, University of Hyderabad"	SAMN02603712	GCA_000192315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/315/GCA_000192315.1_ASM19231v1	21515762	2017
Staphylococcus equorum	246432	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.76526	32.9	-	LNND01	64	2674	2553	9/28/16	4/5/17	Scaffold	Tufts University	SAMN04244258	GCA_001747965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/965/GCA_001747965.1_ASM174796v1	-	341_10
Helicobacter pylori 2018	985080	PRJNA62771	62771	Proteobacteria	delta/epsilon subdivisions	1.56283	39.3	chromosome:NC_017381.1/CP002572.1	-	1	1557	1387	3/15/11	3/22/17	Complete Genome	"Pathogen Biology Laboratory, University of Hyderabad"	SAMN02603713	GCA_000192335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/335/GCA_000192335.1_ASM19233v1	21515762	2018
Pseudomonas chlororaphis subsp. chlororaphis	333	PRJNA290438	290438	Proteobacteria	Gammaproteobacteria	6.79247	63	-	LHVC01	15	6187	6025	8/18/15	4/4/17	Contig	JLU	SAMN03891669	GCA_001269625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/625/GCA_001269625.1_ASM126962v1	-	LMG 5004
Enterococcus cecorum	44008	PRJNA268097	268097	Terrabacteria group	Firmicutes	2.3722	36.2	chromosome:CP010063.1	-	1	-	-	10/16/15	10/16/15	Chromosome	NC State University	SAMN03202987	GCA_001318365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/365/GCA_001318365.1_ASM131836v1	-	CE3
Vibrio cyclitrophicus ZF170	1136171	PRJNA81887	81887	Proteobacteria	Gammaproteobacteria	4.87223	43.6	-	AIDM02	47	4295	4173	3/26/12	4/5/17	Scaffold	Massachusetts Institute of Technology	SAMN02470436	GCA_000256365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/365/GCA_000256365.2_ASM25636v2	22491847	ZF170
Elizabethkingia anophelis NUHP3	1338013	PRJNA205479	205479	FCB group	Bacteroidetes/Chlorobi group	4.33411	35.5	-	ASYG01	71	4006	3883	11/7/13	4/2/17	Contig	SCELSE	SAMN02470991	GCA_000495975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/975/GCA_000495975.1_NUHP3	24012265	NUHP3
Xanthomonas arboricola pv. pruni MAFF 301427	1418096	PRJDB1525	235283	Proteobacteria	Gammaproteobacteria	4.90544	65.4	-	BAVD01	356	5180	4686	1/11/14	9/16/15	Contig	"NARO Institute of Fruit Tree Science (NIFTS), National Agriculture and Food Research Organization (NARO)"	SAMD00036783	GCA_000524455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/455/GCA_000524455.1_ASM52445v1	-	MAFF301427
Salinispora pacifica CNS237	1288089	PRJNA187958	187958	Terrabacteria group	Actinobacteria	5.24313	69.5	-	AUGH01	67	4856	4422	7/10/13	4/11/17	Scaffold	DOE Joint Genome Institute	SAMN02441516	GCA_000424905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/905/GCA_000424905.1_ASM42490v1	-	CNS237
Leptospira kirschneri	29507	PRJNA257123	257123	Spirochaetes	Spirochaetia	4.50776	36.2	-	JQHH01	438	4138	3704	3/2/17	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947890	GCA_002009765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/765/GCA_002009765.1_ASM200976v1	-	56611
Piscirickettsia salmonis LF-89 = ATCC VR-1361	1227812	PRJNA196437	196437	Proteobacteria	Gammaproteobacteria	2.80548	39.6	-	ASSK02	355	2952	2609	5/24/13	4/2/17	Contig	University of Texas at San Antonio	SAMN02471204	GCA_000401515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/515/GCA_000401515.2_ASM40151v2	24201203	LF-89
Rhodococcus fascians	1828	PRJNA286803	286803	Terrabacteria group	Actinobacteria	5.24988	64.7	-	LFDS01	21	4929	4819	6/22/15	4/3/17	Contig	INDEAR	SAMN03770810	GCA_001037935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/935/GCA_001037935.1_RhoFas1.0	-	F7
Campylobacter lanienae	75658	PRJNA340995	340995	Proteobacteria	delta/epsilon subdivisions	1.56729	34.6	-	MJJI01	20	1633	1551	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687015	GCA_002139265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/265/GCA_002139265.1_ASM213926v1	28854596	P0099
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28399	32.4	chromosome:AP017594.1	-	1	-	-	1/24/17	1/27/17	Chromosome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053864	GCA_002356855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/855/GCA_002356855.1_ASM235685v1	-	M11012
Vibrio campbellii	680	PRJNA257165	257165	Proteobacteria	Gammaproteobacteria	5.67369	45.5	-	JPTG01	724	5244	4958	7/22/15	4/3/17	Contig	Naval Research Laboratory	SAMN02948015	GCA_001185275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/275/GCA_001185275.1_ASM118527v1	-	CAIM115
Mycobacterium chelonae	1774	PRJNA347845	347845	Terrabacteria group	Actinobacteria	5.81505	63.9	-	MLIQ01	53	5880	5618	10/26/16	4/5/17	Contig	University of Georgia	SAMN05897998	GCA_001853945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/945/GCA_001853945.1_ASM185394v1	-	15515
Actinomyces naeslundii	1655	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.1403	68	-	MSRT01	42	2676	2529	1/18/17	4/6/17	Scaffold	King's College London	SAMN05898699	GCA_001956635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/635/GCA_001956635.1_ASM195663v1	-	G127B
Geobacillus sp. 8	1817674	PRJNA315613	315613	Terrabacteria group	Firmicutes	3.9038	38.8	-	LVHY01	169	3917	3612	4/20/16	4/12/17	Scaffold	University of Groningen	SAMN04566680	GCA_001624605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/624/605/GCA_001624605.1_ASM162460v1	-	8
Streptococcus sobrinus TCI-342	1074070	PRJNA71909	71909	Terrabacteria group	Firmicutes	2.19645	43.4	-	AGGT01	510	2281	1918	10/6/11	3/30/17	Contig	JCVI	SAMN02436462	GCA_000228145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/145/GCA_000228145.2_SMUT1-NEX_78-342	-	TCI-342
Morganella morganii subsp. morganii	180434	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	3.94344	50.9	-	NEYV01	64	3815	3647	6/9/17	6/12/17	Contig	JCVI	SAMN06812616	GCA_002185325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/325/GCA_002185325.1_ASM218532v1	-	ARLG-2972
Enterococcus hirae 81-15-F4	1262667	PRJNA182156	182156	Terrabacteria group	Firmicutes	2.861	36.8	-	LIJA01	76	2709	2230	6/30/17	7/3/17	Contig	University of Saskatchewan	SAMN03801247	GCA_002212045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/045/GCA_002212045.1_ASM221204v1	-	81-15-F4
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.50938	66.7	-	LOTU01	97	7890	7502	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449156	GCA_001522215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/215/GCA_001522215.1_ASM152221v1	-	INT1-BP232
Pantoea agglomerans	549	PRJNA386632	386632	Proteobacteria	Gammaproteobacteria	3.52764	55.2	-	NGNU01	67	3323	3160	5/24/17	5/30/17	Scaffold	Green Biotech Co.	SAMN07109650	GCA_002157425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/425/GCA_002157425.1_ASM215742v1	-	P5
Mycobacterium africanum MAL010129	1354180	PRJNA211666	211666	Terrabacteria group	Actinobacteria	4.40337	65.5	-	JKZW01	3	4251	4055	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02231133	GCA_000666725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/725/GCA_000666725.1_Myco_afri_MAL010129_V1	-	MAL010129
Gallibacterium anatis	750	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.42205	39.7	-	JPJN01	101	2284	2133	11/5/14	4/2/17	Contig	University of Copenhagen	SAMN02900750	GCA_000772395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/395/GCA_000772395.1_ASM77239v1	-	21K2
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.966	64.1	-	FRZR01	19	4899	4740	12/14/16	3/21/17	Contig	SC	SAMEA2068675	GCA_900131255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/255/GCA_900131255.1_10665_3_70	-	240
Aeromonas veronii	654	PRJNA296464	296464	Proteobacteria	Gammaproteobacteria	4.68042	58.6	-	LKKE01	45	4338	4119	11/19/15	4/4/17	Contig	Texas Tech University	SAMN04099665	GCA_001446815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/815/GCA_001446815.1_ASM144681v1	26824353	TTU2014-141ASC
Leuconostoc pseudomesenteroides	33968	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.99273	39.1	-	MPLM01	126	2059	1878	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981501	GCA_002092645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/645/GCA_002092645.1_ASM209264v1	28217118	LN23
Klebsiella aerogenes	548	PRJNA244547	244547	Proteobacteria	Gammaproteobacteria	5.08493	55.1	-	JOUC01	1	5005	4763	9/17/14	4/6/17	Scaffold	Los Alamos National Laboratory	SAMN02867547	GCA_000755545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/545/GCA_000755545.1_ASM75554v1	-	CDC UA0804-01
Streptobacillus moniliformis	34105	PRJNA319313	319313	Fusobacteria	Fusobacteriia	1.61958	26.6	-	LWTA01	254	1482	1378	6/4/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04892738	GCA_001657785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/785/GCA_001657785.1_ASM165778v1	-	AHL 370-4
Xanthomonas perforans	442694	PRJNA276635	276635	Proteobacteria	Gammaproteobacteria	5.14524	64.9	-	JZVL01	78	4689	4342	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03379414	GCA_001009485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/485/GCA_001009485.1_v1	26089818	GEV872
Streptococcus pseudopneumoniae	257758	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.11913	40	-	JVWC01	76	2145	1997	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197240	GCA_001068945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/945/GCA_001068945.1_ASM106894v1	26230489	1271.rep1_SPSE
Kingella kingae KK242	1305772	PRJEB1624	194476	Proteobacteria	Betaproteobacteria	1.99305	46.5	-	CBSL01	1	1857	1489	9/11/13	4/2/17	Scaffold	URMITE	SAMEA2272297	GCA_000470215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/215/GCA_000470215.1_KK242	-	KK242
Vibrio anguillarum	55601	PRJNA267080	267080	Proteobacteria	Gammaproteobacteria	4.12021	44.645	chromosome I:CP010030.1; chromosome II:CP010031.1; plasmid pJM1:CP016261.1	-	3	3546	3422	2/7/17	2/7/17	Chromosome	University of Copenhagen	SAMN03177691	GCA_001989795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/795/GCA_001989795.1_ASM198979v1	-	Ba35
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.95281	55	-	JTCG02	68	4903	4666	11/17/14	3/25/17	Contig	JCVI	SAMN03012818	GCA_000784175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/175/GCA_000784175.2_SPADES_assembly_of_Enterobacter_cloacae_ND8	-	ND8
Actinomyces oris	544580	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.04536	68.3	-	MSKI01	290	2714	2345	1/5/17	1/5/17	Scaffold	King's College London	SAMN05898731	GCA_001937655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/655/GCA_001937655.1_ASM193765v1	-	S24V
Haemophilus parainfluenzae	729	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.12588	39.3	-	LZMY01	18	2097	1995	7/5/16	4/5/17	Scaffold	TAILORED-Treatment project	SAMN05219283	GCA_001679455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/455/GCA_001679455.1_ASM167945v1	-	CCUG 62655
Agrobacterium sp. B131/95	1841655	PRJNA319063	319063	Proteobacteria	Alphaproteobacteria	7.30157	59.8	-	LXKP01	68	6946	6711	7/22/16	4/13/17	Scaffold	Oregon State University	SAMN04901296	GCA_001692155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/155/GCA_001692155.1_ASM169215v1	27547538	B131/95
Streptococcus parasanguinis	1318	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.27781	41.5	-	JVKT01	84	2172	2070	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197535	GCA_001070915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/915/GCA_001070915.1_ASM107091v1	26230489	344_SPAR
Fusobacterium necrophorum subsp. funduliforme	143387	PRJNA315619	315619	Fusobacteria	Fusobacteriia	2.33937	35	-	LVEY01	70	2336	2227	3/25/16	4/5/17	Contig	Aarhus University	SAMN04570266	GCA_001597405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/405/GCA_001597405.1_ASM159740v1	-	F1285
Citrobacter freundii	546	PRJNA252011	252011	Proteobacteria	Gammaproteobacteria	5.25674	51.5	-	JRTQ01	155	5232	4984	10/26/15	4/4/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872799	GCA_001412855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/855/GCA_001412855.1_ASM141285v1	25501822	RU2 BHI23
Leptospira santarosai str. HAI1349	1049981	PRJNA74153	74153	Spirochaetes	Spirochaetia	3.85175	41.7	-	ANNW01	114	3864	3555	3/15/13	4/1/17	Contig	J. Craig Venter Institute	SAMN01047922	GCA_000346915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/915/GCA_000346915.1_gls454169v01	-	HAI1349
Streptococcus gallolyticus	315405	PRJEB17598	351947	Terrabacteria group	Firmicutes	2.36894	37.6	-	FPBN01	24	2349	2243	11/2/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660328	GCA_900116655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/655/GCA_900116655.1_IMG-taxon_2606217751_annotated_assembly	-	LMG 15572
Pantoea ananatis	553	PRJNA278208	278208	Proteobacteria	Gammaproteobacteria	4.73791	53.5	-	LDRA01	46	4526	4300	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401373	GCA_001475885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/885/GCA_001475885.1_ASM147588v1	26793183	RSA47
Streptococcus anginosus SK52 = DSM 20563	1000570	PRJNA379934	379934	Terrabacteria group	Firmicutes	1.90435	38.6	-	NARD01	9	1869	1771	4/12/17	4/16/17	Contig	Loyola University Chicago	SAMN06624126	GCA_002088025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/025/GCA_002088025.1_ASM208802v1	-	ATCC 33397
Staphylococcus lugdunensis VCU150	904354	PRJNA53783	53783	Terrabacteria group	Firmicutes	2.53605	33.7	-	JIBS01	28	2411	2322	4/29/14	4/2/17	Contig	J. Craig Venter Institute	SAMN00116873	GCA_000649085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/085/GCA_000649085.1_gslvcu150v01	-	VCU150
Riemerella anatipestifer	34085	PRJNA308417	308417	FCB group	Bacteroidetes/Chlorobi group	2.19889	35	-	LUDQ01	50	2097	2028	6/20/16	4/5/17	Contig	Sichuan Agricultural University	SAMN04395209	GCA_001670725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/670/725/GCA_001670725.1_RCAD0124	-	RCAD0124
Acinetobacter pittii	48296	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	4.07821	38.7	-	BBTX01	82	3974	3799	2/20/15	4/3/17	Contig	National Institute of Technology and Evaluation	SAMD00020349	GCA_000949735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/735/GCA_000949735.1_ASM94973v1	-	NBRC 110505
Xanthomonas euvesicatoria	456327	PRJNA267084	267084	Proteobacteria	Gammaproteobacteria	5.09201	64.7	-	JTEJ01	380	4696	4091	7/21/16	4/5/17	Contig	Institut de Recherche pour le Developpement	SAMN03177542	GCA_001691345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/345/GCA_001691345.1_XEU_LMG909_E1.0	-	LMG 909
Pseudomonas amygdali pv. tabaci str. ATCC 11528	573066	PRJNA32261	32261	Proteobacteria	Gammaproteobacteria	6.06841	58.1	-	ACHU02	1405	5993	5051	3/2/09	4/2/17	Contig	The Sainsbury Laboratory	SAMN00002878	GCA_000159835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/835/GCA_000159835.2_ASM15983v2	19703286	ATCC 11528
Brucella sp. UK38/05	1160234	PRJNA173611	173611	Proteobacteria	Alphaproteobacteria	3.3149	57.2	-	AQNR01	49	3419	3156	4/16/13	4/8/17	Contig	Broad Institute	SAMN00811227	GCA_000367125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/125/GCA_000367125.1_Bruc_sp_UK38_05_V1	-	UK38/05
Enterobacter asburiae	61645	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.85197	55.8	-	JWGJ01	165	4725	4558	7/10/15	4/3/17	Contig	University of Washington	SAMN03196973	GCA_001052635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/635/GCA_001052635.1_ASM105263v1	26230489	1011_EASB
Helicobacter pylori 908	869727	PRJNA50869	50869	Proteobacteria	delta/epsilon subdivisions	1.54967	39.3	chromosome:NC_017357.1/CP002184.1	-	1	1548	1374	9/24/10	3/22/17	Complete Genome	"University of Hyderabad, India"	SAMN02604189	GCA_000148665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/665/GCA_000148665.1_ASM14866v1	20952566	908
Pediococcus acidilactici	1254	PRJEB19183	374431	Terrabacteria group	Firmicutes	2.01688	42.1	-	FUHV01	13	1958	1861	2/11/17	5/31/17	Contig	MICALIS	SAMEA80353168	GCA_900163535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/535/GCA_900163535.1_ASM90016353v1	-	S7
Vibrio alginolyticus	663	PRJNA282906	282906	Proteobacteria	Gammaproteobacteria	5.25584	44.5	-	LCUM01	68	4864	4697	5/26/15	4/3/17	Contig	University of Copenhagen	SAMN03580732	GCA_001013315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/013/315/GCA_001013315.1_ASM101331v1	26139724	V1
Pseudoalteromonas sp. TB51	1055803	PRJNA202423	202423	Proteobacteria	Gammaproteobacteria	4.63332	40.9	-	AUTO01	369	4394	3691	11/20/13	4/21/17	Contig	University of Florence	SAMN02260216	GCA_000498055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/055/GCA_000498055.1_TB51	-	TB51
Pseudomonas savastanoi pv. phaseolicola	319	PRJNA287074	287074	Proteobacteria	Gammaproteobacteria	6.2057	57.4	-	LGKV01	50	5446	4953	9/18/15	4/4/17	Scaffold	University of Toronto	SAMN03837774	GCA_001294065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/065/GCA_001294065.1_PphY5_2	-	Y5_2
Pseudomonas syringae pv. viburni	251703	PRJNA274690	274690	Proteobacteria	Gammaproteobacteria	6.4923	58.6	-	JYHK01	265	6186	5648	3/2/15	4/3/17	Contig	INRA	SAMN03328953	GCA_000935765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/765/GCA_000935765.1_PSVCFBP1702-G1	25931602	CFBP 1702
Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535	427082	PRJNA18835	18835	Proteobacteria	Gammaproteobacteria	5.01263	64.8	-	ACPY01	351	4599	4039	3/30/10	6/15/17	Scaffold	Sao Paulo State (Brazil) Xanthomonas Consortium	SAMN02472096	GCA_000175155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/155/GCA_000175155.1_ASM17515v1	20388224	ICPB 10535
Achromobacter xylosoxidans NBRC 15126 = ATCC 27061	1216976	PRJDB238	171906	Proteobacteria	Betaproteobacteria	6.79274	67.4	-	BCZG01	63	6240	6078	3/11/16	4/5/17	Contig	National Institute of Technology and Evaluation	SAMD00046892	GCA_001598595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/595/GCA_001598595.1_ASM159859v1	-	NBRC 15126
Streptococcus oralis SK100	1095740	PRJNA75163	75163	Terrabacteria group	Firmicutes	1.92058	41.1	-	AJKP01	51	1984	1831	4/2/12	3/30/17	Contig	J. Craig Venter Institute	SAMN00761854	GCA_000257475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/475/GCA_000257475.1_SoralisSK100v1.0	-	SK100
Streptomyces griseus	1911	PRJNA293375	293375	Terrabacteria group	Actinobacteria	8.10209	72.1	-	MDDK01	1108	7182	6326	9/11/16	3/13/17	Scaffold	USDA/ARS/NCAUR	SAMN05558833	GCA_001723115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/115/GCA_001723115.1_ASM172311v1	-	NRRL B-2165
Acinetobacter nosocomialis	106654	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.18011	38.9	-	LLEC01	155	4131	3939	11/5/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145659	GCA_001433045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/045/GCA_001433045.1_ASM143304v1	-	ABBL048
Klebsiella variicola	244366	PRJEB8302	276432	Proteobacteria	Gammaproteobacteria	5.84281	57.6	-	CDQZ01	1244	6321	5259	2/24/15	2/21/17	Contig	CGS-GL	SAMEA3218001	GCA_000942155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/155/GCA_000942155.1_1f2B_assembly	-	1f2B
Bacillus atrophaeus	1452	PRJEB8909	281803	Terrabacteria group	Firmicutes	4.05283	43.2	-	CUWS01	188	4053	3892	4/22/15	4/3/17	Contig	DGAMNRBC	SAMEA3313417	GCA_000983035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/035/GCA_000983035.1_930029	-	930029
Rhodococcus hoagii	43767	PRJNA316970	316970	Terrabacteria group	Actinobacteria	5.03459	68.8	-	LWTS01	32	4693	4578	4/17/17	6/6/17	Contig	The University of Edinburgh	SAMN04880522	GCA_002094375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/375/GCA_002094375.1_ASM209437v1	27638249	PAM2279
Acinetobacter radioresistens	40216	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.66547	41.9	-	DFXR01	56	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452945	GCA_002381745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/745/GCA_002381745.1_ASM238174v1	28894102	-
Staphylococcus capitis	29388	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.6024	33	-	LORZ01	4	2531	2304	12/21/15	4/4/17	Contig	US Food and Drug Administration 	SAMN03996314	GCA_001471555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/555/GCA_001471555.1_ASM147155v1	-	FDAARGOS_173
Staphylococcus hominis	1290	PRJNA352113	352113	Terrabacteria group	Firmicutes	2.35649	31.4	-	MPNR01	43	2367	2252	11/25/16	4/5/17	Contig	"Northwest Institute of Plateau Biology, Chinese Academy of Sciences"	SAMN05967207	GCA_001886335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/335/GCA_001886335.1_ASM188633v1	-	BHG17
Lactobacillus paracasei subsp. paracasei Lpp49	1256213	PRJNA178441	178441	Terrabacteria group	Firmicutes	2.92442	46.2	-	ANKJ01	109	3017	2804	6/11/13	4/1/17	Contig	Danone Research	SAMN02469726	GCA_000410035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/035/GCA_000410035.1_ASM41003v1	23894338	Lpp49
Gardnerella vaginalis JCP7276	1261058	PRJNA181313	181313	Terrabacteria group	Actinobacteria	1.65959	41	-	ATJR01	145	1456	1259	6/25/13	4/1/17	Scaffold	Washington University	SAMN02436904	GCA_000414685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/685/GCA_000414685.1_ASM41468v1	-	JCP7276
Rothia mucilaginosa	43675	PRJNA267549	267549	Terrabacteria group	Actinobacteria	4.76279	55.2	-	JVJH01	1129	-	-	7/10/15	7/13/16	Contig	University of Washington	SAMN03197573	GCA_001064775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/775/GCA_001064775.1_ASM106477v1	26230489	382_RMUC
Aggregatibacter actinomycetemcomitans serotype d str. SA3033	1434260	PRJNA230861	230861	Proteobacteria	Gammaproteobacteria	2.19861	44.3	-	AZTW01	127	2203	2031	3/23/16	4/5/17	Contig	"Bumgarner laboratory, Department of Microbiology, University of Washington"	SAMN04573007	GCA_001596385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/385/GCA_001596385.1_SA3033v1.0	-	SA3033
Lactobacillus crispatus	47770	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.01438	36.9	-	LYQS01	73	2057	1856	7/14/17	7/17/17	Contig	University of Minnesota	SAMN04498974	GCA_002218565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/565/GCA_002218565.1_ASM221856v1	-	UMNLC2
Brachyspira hyodysenteriae	159	PRJNA272555	272555	Spirochaetes	Spirochaetia	3.01872	27	-	JXNG01	165	2640	2533	5/26/15	4/3/17	Scaffold	Murdoch University	SAMN03285448	GCA_001013155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/013/155/GCA_001013155.1_ASM101315v1	26098837	B8044
Mycobacterium kansasii	1768	PRJNA317047	317047	Terrabacteria group	Actinobacteria	6.17169	66.2	-	LWCH01	345	5773	5160	4/27/16	4/10/17	Scaffold	University of Lodz	SAMN04599330	GCA_001632905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/905/GCA_001632905.1_Mkan_typeV_1.0	27257194	1010001454
Pectobacterium carotovorum subsp. brasiliense	180957	PRJNA269226	269226	Proteobacteria	Gammaproteobacteria	4.7626	52.1	-	JUJJ01	22	4283	4112	12/29/14	4/2/17	Contig	Beijing Academy of Agriculture and Forestry Sciences	SAMN03252605	GCA_000808235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/235/GCA_000808235.1_ASM80823v1	-	YC D21
Streptococcus equinus	1335	PRJEB15732	347684	Terrabacteria group	Firmicutes	1.96262	37.9	-	FNKE01	6	1944	1887	10/20/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216392	GCA_900101445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/445/GCA_900101445.1_IMG-taxon_2654588139_annotated_assembly	-	Sb05
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.81704	47.6	-	MECD01	109	3583	3388	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320423	GCA_001882945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/945/GCA_001882945.1_ASM188294v1	-	09/0217-5k
Escherichia albertii	208962	PRJDB3047	301492	Proteobacteria	Gammaproteobacteria	4.83065	49.4	-	BBVP01	106	5026	4575	11/6/15	2/25/17	Scaffold	University of Miyazaki	SAMD00026651	GCA_001514785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/785/GCA_001514785.1_ASM151478v1	26537224	NIAH_Bird_5
Lactobacillus johnsonii	33959	PRJNA384810	384810	Terrabacteria group	Firmicutes	1.97341	34.4	-	NGOF01	93	1870	1748	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848425	GCA_002253205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/205/GCA_002253205.1_ASM225320v1	-	117k
Rhodococcus erythropolis JCM 9805	1298616	PRJDB892	243770	Terrabacteria group	Actinobacteria	6.95574	62.4	-	BBEL01	235	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016841	GCA_001312745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/745/GCA_001312745.1_ASM131274v1	-	JCM 9805
Flavobacterium psychrophilum	96345	PRJNA302794	302794	FCB group	Bacteroidetes/Chlorobi group	2.71326	32.6	-	LNNF01	245	2401	2304	1/11/16	4/5/17	Contig	South Dakota State University	SAMN04279589	GCA_001510795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/795/GCA_001510795.1_ASM151079v1	-	Pullman
Campylobacter concisus	199	PRJNA280469	280469	Proteobacteria	delta/epsilon subdivisions	1.79649	37.5	-	NDYS01	13	1812	1721	6/4/17	6/6/17	Contig	Institute of Environmental Science and Research (ESR)	SAMN03457021	GCA_002165875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/875/GCA_002165875.1_ASM216587v1	-	Lasto220.96
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.90197	67.1	-	LOTH01	79	7147	6790	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449143	GCA_001522475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/475/GCA_001522475.1_ASM152247v1	-	RF23-BP81
Propionibacterium freudenreichii	1744	PRJEB6441	270205	Terrabacteria group	Actinobacteria	2.6354	67.1	-	CCYY01	47	2330	2163	12/11/14	4/4/17	Scaffold	INRA STLO	SAMEA2822503	GCA_900000085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/000/085/GCA_900000085.1_CIRM-BIA134	-	CIRM-BIA 134
Aeromonas hydrophila 14	1268074	PRJNA183195	183195	Proteobacteria	Gammaproteobacteria	4.67332	62	-	AOBM01	75	4330	4139	4/6/13	5/18/17	Contig	University of Malaya	SAMN02471854	GCA_000354655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/655/GCA_000354655.1_de_novo_assembly	-	14
Pseudomonas stutzeri NF13	1212548	PRJNA170977	170977	Proteobacteria	Gammaproteobacteria	4.67467	63	-	AOBS01	82	4386	4206	2/21/13	5/19/17	Contig	University of Balearic Islands	SAMN02471580	GCA_000341615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/615/GCA_000341615.1_PstNF13_1.0	23516224	NF13
Yersinia intermedia	631	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.99478	47.6	-	MWTO01	128	4714	3840	6/14/17	6/14/17	Contig	SRCAMB	SAMN06344235	GCA_002192885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/885/GCA_002192885.1_ASM219288v1	-	SCPM-O-B-7605
Paenibacillus polymyxa	1406	PRJNA267725	267725	Terrabacteria group	Firmicutes	5.94828	45.1	-	JTHO01	75	5217	4912	3/4/15	4/3/17	Contig	University of Alberta	SAMN03199808	GCA_000943535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/535/GCA_000943535.1_ASM94353v1	25908148	NRRL B-30509
Bacillus coagulans	1398	PRJNA270593	270593	Terrabacteria group	Firmicutes	3.27533	47.1	-	LQYI01	202	3360	3078	3/11/16	4/5/17	Scaffold	University of Groningen	SAMN03267278	GCA_001587215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/215/GCA_001587215.1_B4099	27174261	B4099
Vibrio sp. MEBiC08052	1761910	PRJNA303503	303503	Proteobacteria	Gammaproteobacteria	4.76205	45.7	-	LQIY01	3	4126	3977	1/7/16	4/11/17	Scaffold	Korea Institute of Ocean Science and Technology	SAMN04288057	GCA_001506075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/075/GCA_001506075.1_ASM150607v1	-	MEBiC08052
Staphylococcus saprophyticus	29385	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.6294	33	-	JUUE01	98	2568	2420	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197966	GCA_001074225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/225/GCA_001074225.1_ASM107422v1	26230489	758_SSAP
Streptococcus sanguinis SK340	888814	PRJNA53169	53169	Terrabacteria group	Firmicutes	2.40873	43	-	AFQB01	4	2380	2298	7/7/11	3/30/17	Scaffold	Baylor College of Medicine	SAMN00253970	GCA_000220275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/275/GCA_000220275.1_ASM22027v1	-	SK340
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.21753	36.7	-	LPRN01	13	2334	2177	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305148	GCA_001560165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/165/GCA_001560165.1_GG12_C01_14	-	GG12-C01-14
Bacillus weihenstephanensis	86662	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.48261	35.4	-	MUAS01	113	5713	5316	3/3/17	3/6/17	Contig	Cornell University	SAMN05953539	GCA_002014655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/655/GCA_002014655.1_ASM201465v1	-	FSL H8-0492
Bifidobacterium breve	1685	PRJNA287203	287203	Terrabacteria group	Actinobacteria	2.42672	58.7	-	LFII01	28	2164	1964	7/30/15	4/3/17	Contig	University of Parma	SAMN03777307	GCA_001189355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/355/GCA_001189355.1_assBREI4	-	BBRI4
Planococcus sp. PAMC 21323	1526927	PRJNA256273	256273	Terrabacteria group	Firmicutes	3.19986	39.2937	chromosome:NZ_CP009129.1/CP009129.1; plasmid pPla:NZ_CP009130.1/CP009130.1	-	2	3153	3038	11/19/14	4/9/17	Complete Genome	Korea Atomic Energy Research Institute	SAMN02942809	GCA_000785555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/555/GCA_000785555.1_ASM78555v1	-	PAMC 21323
Moraxella catarrhalis	480	PRJNA297370	297370	Proteobacteria	Gammaproteobacteria	1.90507	41.7	-	LXHW01	24	1796	1656	6/3/16	4/5/17	Contig	Drexel University College of Medicine	SAMN04122787	GCA_001656115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/115/GCA_001656115.1_ASM165611v1	26912404	A9
Bacillus clausii	79880	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.36858	44.6	-	NPMP01	161	4310	4188	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372691	GCA_002272655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/655/GCA_002272655.1_assembly-7522_v1	-	7522
Lactobacillus salivarius	1624	PRJNA383393	383393	Terrabacteria group	Firmicutes	2.0256	32.7	-	NDYW01	77	2052	1892	8/14/17	8/16/17	Contig	Texas Tech University	SAMN06763640	GCA_002250405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/405/GCA_002250405.1_ASM225040v1	-	L28
Clostridium beijerinckii AAU1	1202535	PRJNA168249	168249	Terrabacteria group	Firmicutes	6.96016	30	-	AUPH01	6119	-	-	11/20/13	1/8/14	Contig	Anand Agricultural University	SAMN02469634	GCA_000497775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/775/GCA_000497775.2_ClosBeijAAU1	-	AAU1
Klebsiella oxytoca 10-5248	883123	PRJNA52149	52149	Proteobacteria	Gammaproteobacteria	6.01418	54.9	-	AGDN01	6	5791	5501	7/15/15	2/25/17	Scaffold	Broad Institute	SAMN02463897	GCA_001078235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/235/GCA_001078235.1_Kleb_oxyt_10-5248_V1	-	Oct-48
Cronobacter sakazakii	28141	PRJNA251814	251814	Proteobacteria	Gammaproteobacteria	4.53845	56.9	-	JOLR01	93	4428	4195	10/9/15	4/4/17	Scaffold	"Nottingham Trent University, UK"	SAMN02840809	GCA_001309225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/225/GCA_001309225.1_ASM130922v1	26438044	698
Acinetobacter baumannii	470	PRJNA269083	269083	Proteobacteria	Gammaproteobacteria	3.91774	39.2891	chromosome:NZ_CP010781.1/CP010781.1; plasmid pA1-1:NZ_CP010782.1/CP010782.1	-	2	3782	3638	1/29/15	3/16/17	Complete Genome	University of Melbourne	SAMN03248539	GCA_000830055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/055/GCA_000830055.1_ASM83005v1	25767221	A1
Proteus mirabilis	584	PRJNA264732	264732	Proteobacteria	Gammaproteobacteria	4.13721	39.1	-	JSCB01	91	3919	3702	11/3/14	4/2/17	Contig	New Jersey Medical School-Rutgers University	SAMN03140307	GCA_000770765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/765/GCA_000770765.1_ASM77076v1	25896692	Pm-Oxa48
Mycoplasma bovis	28903	PRJNA306895	306895	Terrabacteria group	Tenericutes	0.924455	29.3	-	LQDT01	71	810	717	1/4/17	4/6/17	Contig	"University of California, Davis"	SAMN04366515	GCA_001930225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/225/GCA_001930225.1_ASM193022v1	-	2351MB
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.37284	32.6	-	CUHF01	51	2351	2161	3/31/15	3/26/17	Contig	SC	SAMEA1035028	GCA_001225905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/905/GCA_001225905.1_7068_7_60	-	140376
Propionibacterium acnes HL001PA1	765105	PRJNA49245	49245	Terrabacteria group	Actinobacteria	2.47493	60.1	-	ADZV01	16	2483	2254	7/28/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189190	GCA_000144005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/005/GCA_000144005.1_ASM14400v1	-	HL001PA1
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.94715	67	-	LOWX01	101	6369	6059	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449248	GCA_001524145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/145/GCA_001524145.1_ASM152414v1	-	FL-7-1-10-S1-D0
Burkholderia sp. Ch1-1	243261	PRJNA40819	40819	Proteobacteria	Betaproteobacteria	8.74353	62.4	-	ADNR02	4	7962	7587	5/10/10	5/18/17	Scaffold	US DOE Joint Genome Institute (JGI-PGF)	SAMN02256533	GCA_000178415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/415/GCA_000178415.2_ASM17841v2	-	Ch1-1
Campylobacter coli	195	PRJNA299429	299429	Proteobacteria	delta/epsilon subdivisions	1.72745	31.3078	chromosome:NZ_CP013032.1/CP013032.1; plasmid unnamed:NZ_CP013033.1/CP013033.1	-	2	1777	1673	10/28/15	4/10/17	Chromosome	University of Tulsa	SAMN04202592	GCA_001417615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/615/GCA_001417615.1_ASM141761v1	-	CO2-160
Mycoplasma gallisepticum	2096	PRJNA325637	325637	Terrabacteria group	Tenericutes	0.943136	31.5	-	MATM01	92	795	675	7/12/16	4/5/17	Contig	University of Georgia	SAMN05272706	GCA_001683675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/675/GCA_001683675.1_ASM168367v1	-	K6216D
Lactobacillus brevis	1580	PRJNA280953	280953	Terrabacteria group	Firmicutes	2.62156	45.5	-	LBHR01	138	2708	2451	5/20/15	4/3/17	Contig	Vavilov Institute of General Genetics	SAMN03470252	GCA_001010995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/995/GCA_001010995.1_ASM101099v1	-	47f
Mannheimia haemolytica D38	1329906	PRJNA200975	200975	Proteobacteria	Gammaproteobacteria	2.61167	41	-	AUNL01	97	2711	2515	8/2/13	4/1/17	Contig	National Animal Disease Center	SAMN02116556	GCA_000443105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/105/GCA_000443105.1_MhD38v2	25745008	D38
Acinetobacter baumannii	470	PRJNA286871	286871	Proteobacteria	Gammaproteobacteria	3.85006	39.2739	chromosome:NZ_CP021347.1/CP021347.1; plasmid pB8300:NZ_CP021348.1/CP021348.1	-	2	3757	3506	5/31/17	6/2/17	Complete Genome	University of Kansas Medical Center	SAMN03771402	GCA_001077965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/965/GCA_001077965.2_ASM107796v2	26294640	B8300
Methanosarcina barkeri 227	1434106	PRJNA230937	230937	Euryarchaeota	Methanomicrobia	4.48757	39.2691	chromosome:NZ_CP009530.1/CP009530.1; plasmid unnamed:NZ_CP009529.1/CP009529.1	-	2	3747	3439	4/7/15	4/3/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN03074573	GCA_000970065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/065/GCA_000970065.1_ASM97006v1	-	227
Bartonella henselae	38323	PRJNA295147	295147	Proteobacteria	Alphaproteobacteria	1.82181	38	-	LOAE01	42	1628	1429	1/4/17	4/10/17	Contig	Anses UMR BIPAR	SAMN04286626	GCA_001932225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/225/GCA_001932225.1_ASM193222v1	-	A235
Lactobacillus acidophilus CFH	1421011	PRJNA227335	227335	Terrabacteria group	Firmicutes	1.25238	34.8	-	AYUA01	555	-	-	11/20/13	11/20/13	Contig	Los Alamos National Laboratory	SAMN02401338	GCA_000497815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/815/GCA_000497815.1_1cell_lacAci38final	-	CFH
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.15772	39.9	-	FPMC01	2	1055	962	5/10/17	5/24/17	Contig	WTSI	SAMEA1094355	GCA_900118885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/885/GCA_900118885.1_7067_6_62	-	10DC82
Leuconostoc mesenteroides	1245	PRJDB4328	304145	Terrabacteria group	Firmicutes	2.03285	37.7	-	BCMO01	58	2043	1915	11/21/15	4/5/17	Contig	Kyushu University	SAMD00042708	GCA_001570665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/665/GCA_001570665.1_ASM157066v1	27034488	213M0
Anaplasma phagocytophilum	948	PRJEB13033	321622	Proteobacteria	Alphaproteobacteria	1.68232	41.9	-	FLLR01	249	1393	1153	5/26/16	4/5/17	Contig	INRA-MIG	SAMEA3909857	GCA_900078505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/505/GCA_900078505.1_ANAP_C1_V1	-	C1
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	3.98922	41.6	-	JJQI01	123	3444	3240	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708935	GCA_000979185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/185/GCA_000979185.1_gtlEnvA5udCFS	25756680	1.H.A.1A.4
Methanosarcina barkeri str. Wiesmoor	1434109	PRJNA230940	230940	Euryarchaeota	Methanomicrobia	4.90719	39.267	chromosome:NZ_CP009526.1/CP009526.1; plasmid unnamed:NZ_CP009525.1/CP009525.1	-	2	4091	3781	4/7/15	4/3/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN03074576	GCA_000969985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/985/GCA_000969985.1_ASM96998v1	-	Wiesmoor
Lactobacillus gasseri	1596	PRJNA369598	369598	Terrabacteria group	Firmicutes	1.98572	34.9	-	MUJA01	35	1958	1790	2/17/17	4/6/17	Scaffold	University of Naples Federico II	SAMN06289783	GCA_002003555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/003/555/GCA_002003555.1_ASM200355v1	-	AL5
Yersinia enterocolitica	630	PRJNA243535	243535	Proteobacteria	Gammaproteobacteria	4.53855	47.3	-	JPDV01	1	4258	3966	9/16/14	3/24/17	Scaffold	Los Alamos National Laboratory	SAMN02887290	GCA_000755055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/055/GCA_000755055.1_YEG_1	25342679	ATCC 9610
Methanosarcina barkeri str. Fusaro	269797	PRJNA103	103	Euryarchaeota	Methanomicrobia	4.87377	39.2575	chromosome:NC_007355.1/CP000099.1; plasmid 1:NC_007349.1/CP000098.1	-	2	4062	3759	8/12/05	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02598252	GCA_000195895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/895/GCA_000195895.1_ASM19589v1	-	Fusaro
Streptococcus gordonii	1302	PRJNA280687	280687	Terrabacteria group	Firmicutes	2.16476	40.4	-	LAWQ01	28	2094	2001	3/11/16	4/5/17	Contig	University of Malaya	SAMN03480740	GCA_001589055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/589/055/GCA_001589055.1_ASM158905v1	-	SK120
[Haemophilus] ducreyi	730	PRJNA270894	270894	Proteobacteria	Gammaproteobacteria	1.63525	38.3	chromosome:CP011221.1	-	1	1590	1435	6/30/15	7/23/15	Chromosome	Indiana University School of Medicine	SAMN03271820	GCA_001043275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/275/GCA_001043275.1_ASM104327v1	-	CLU4
Corynebacterium diphtheriae str. Aberdeen	1206107	PRJNA169862	169862	Terrabacteria group	Actinobacteria	2.36745	53.5	-	AUZO01	38	2273	2096	8/28/13	4/1/17	Contig	"University of Strathclyde, Glasgow, UK"	SAMN02471951	GCA_000455805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/805/GCA_000455805.1_ASM45580v1	24200588	Aberdeen
Mesorhizobium loti	381	PRJNA399611	399611	Proteobacteria	Alphaproteobacteria	6.4808	63	-	NSFQ01	49	6382	6053	9/12/17	9/14/17	Contig	Curtin University	SAMN07540854	GCA_002294865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/865/GCA_002294865.1_ASM229486v1	-	R7ANSx3876
Helicobacter pylori Aklavik86	1055532	PRJNA69925	69925	Proteobacteria	delta/epsilon subdivisions	1.50793	39.253	chromosome:NC_019563.1/CP003476.1; plasmid p1HPAKL86:NC_019564.1/CP003477.1; plasmid p2HPAKL86:NC_019565.1/CP003478.1	-	3	1472	1366	11/26/12	3/23/17	Complete Genome	Washington University Medical School	SAMN02604324	GCA_000317875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/875/GCA_000317875.1_ASM31787v1	25883278	Aklavik86
Bordetella bronchiseptica MBORD839	1331236	PRJNA202148	202148	Proteobacteria	Betaproteobacteria	5.19083	68.2	-	JGXV01	103	4968	4813	5/12/14	4/2/17	Contig	JCVI	SAMN02231427	GCA_000689675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/675/GCA_000689675.1_gbb40v01	25908122	MBORD839
Campylobacter concisus 13826	360104	PRJNA17159	17159	Proteobacteria	delta/epsilon subdivisions	2.09941	39.2388	chromosome:NC_009802.2/CP000792.2; plasmid pCCON16:NC_009796.1/CP000794.1; plasmid pCCON31:NC_009795.1/CP000793.1	-	3	2120	2033	9/12/07	4/5/17	Complete Genome	TIGR	SAMN02604054	GCA_000017725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/725/GCA_000017725.2_ASM1772v2	-	13826
Clostridium sporogenes	1509	PRJNA278445	278445	Terrabacteria group	Firmicutes	4.16932	27.8697	plasmid unnamed:NZ_CM007811.1/CM007811.1	LLES02	30	3982	3761	11/17/15	4/5/17	Contig	Illinois Institute of Technology	SAMN03418525	GCA_001444715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/715/GCA_001444715.2_ASM144471v2	26519392	-
Acinetobacter baumannii ZW85-1	1400867	PRJNA219230	219230	Proteobacteria	Gammaproteobacteria	3.92525	39.2009	chromosome:NC_023028.1/CP006768.1; plasmid ZW85p2:NC_023031.1/CP006769.1; plasmid pAbNDM-1:NC_019985.2/JN377410.2	-	3	3712	3539	12/11/13	3/15/17	Complete Genome	"Beijing Institute of Genomics, Chinese Academy of Sciences"	SAMN02641530	GCA_000505685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/685/GCA_000505685.2_ASM50568v2	24459253	ZW85-1
Vibrio splendidus FF-500	1191309	PRJNA167014	167014	Proteobacteria	Gammaproteobacteria	5.85883	44.2	-	AJZH02	58	5203	4925	6/25/12	4/5/17	Scaffold	Broad Institute	SAMN02470478	GCA_000272265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/265/GCA_000272265.2_ASM27226v2	22955834	FF-500
Acetobacter pasteurianus	438	PRJNA306257	306257	Proteobacteria	Alphaproteobacteria	2.82577	52.7	-	LPWU01	133	2607	2502	1/17/17	4/6/17	Contig	University of Alberta	SAMN04346871	GCA_001953595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/595/GCA_001953595.1_ASM195359v1	27493201	AD
Lactobacillus rhamnosus	47715	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.97813	46.6	-	JUTB01	143	2999	2812	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197995	GCA_001067335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/335/GCA_001067335.1_ASM106733v1	26230489	784_LRHA
Pasteurella multocida subsp. gallicida P1059	1169409	PRJNA152827	152827	Proteobacteria	Gammaproteobacteria	2.30791	40.3	chromosome:NZ_CM001581.1/CM001581.1	AMBQ01	1	4349	4212	9/13/12	3/30/17	Chromosome	none	SAMN02470591	GCA_000298675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/675/GCA_000298675.1_P1059v1	23405337	P1059
Haemophilus parasuis ST4-1	1399771	PRJNA218835	218835	Proteobacteria	Gammaproteobacteria	2.18553	39.9	-	JJNQ01	191	2202	1998	5/13/14	4/2/17	Contig	"Newport Laboratories, A Sanofi company"	SAMN02388246	GCA_000690655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/655/GCA_000690655.1_HparST4-1v1.0	25189591	ST4-1
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.1298	41.2	-	CWDQ01	74	2048	1889	6/24/15	3/26/17	Contig	SC	SAMEA1032755	GCA_001175125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/125/GCA_001175125.1_6903_7_30	-	EQUI0175
Micrococcus luteus	1270	PRJEB18389	355786	Terrabacteria group	Actinobacteria	2.56242	72.8	-	FRCE01	37	2386	2250	12/2/16	4/6/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487849	GCA_900142795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/795/GCA_900142795.1_IMG-taxon_2623620484_annotated_assembly	-	VTM4R57
Alteromonas macleodii	28108	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.77046	44.5	-	DBAM01	149	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450467	GCA_002291655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/655/GCA_002291655.1_ASM229165v1	28894102	-
Bifidobacterium bifidum	1681	PRJNA263318	263318	Terrabacteria group	Actinobacteria	2.36097	63	-	JSDU01	9	2033	1828	6/5/15	4/10/17	Contig	University of Parma	SAMN03097398	GCA_001020355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/355/GCA_001020355.1_Bbif01v4	25523018	85B
Yersinia frederiksenii	29484	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	5.02438	47.4	-	CQDT01	73	4755	4529	3/23/15	4/3/17	Scaffold	SC	SAMEA859974	GCA_001171065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/065/GCA_001171065.1_4840_6_7	-	RS-42
Bacillus mycoides	1405	PRJNA356813	356813	Terrabacteria group	Firmicutes	5.74351	35.1	-	MRWU01	73	6097	5689	5/5/17	6/15/17	Contig	University of Groningen	SAMN06127746	GCA_002118195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/118/195/GCA_002118195.1_ASM211819v1	-	S3E15
Comamonas testosteroni	285	PRJNA280733	280733	Proteobacteria	Betaproteobacteria	5.38545	61.3	-	LAVC01	116	4968	4811	4/24/15	4/3/17	Contig	University of Malaya	SAMN03265418	GCA_000980855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/855/GCA_000980855.1_ASM98085v1	-	KY3
Stenotrophomonas maltophilia PML168	1118235	PRJEB46	169891	Proteobacteria	Gammaproteobacteria	4.40388	66.6	-	CAJH01	97	4032	3875	6/1/12	6/15/17	Contig	PMLA	SAMEA2272452	GCA_000308335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/335/GCA_000308335.1_ASM30833v1	22887661	PML168
Legionella waltersii	66969	PRJEB6403	251923	Proteobacteria	Gammaproteobacteria	3.7357	39.2	chromosome 1:NZ_LT906442.1/LT906442.1	-	1	3441	3277	8/15/17	8/28/17	Complete Genome	SC	SAMEA4504053	GCA_900187095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/095/GCA_900187095.1_51699_A01	-	NCTC13017
Bifidobacterium animalis subsp. lactis HN019	486409	PRJNA28807	28807	Terrabacteria group	Actinobacteria	1.91589	60.5	-	ABOT01	28	1635	1566	4/15/08	3/30/17	Contig	Fonterra Research Centre	SAMN02469791	GCA_000172535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/535/GCA_000172535.1_Blac_1.0	-	HN019
Chlamydia psittaci 02DC18	1112256	PRJNA77085	77085	PVC group	Chlamydiae	1.23484	39.2	-	ATKS01	89	1103	1030	6/25/13	4/1/17	Scaffold	University of Maryland School of Medicine	SAMN00860207	GCA_000415585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/585/GCA_000415585.1_ASM41558v1	-	02DC18
Sphingobacteriaceae bacterium GW460-11-11-14-LB5	1986952	PRJNA386054	386054	FCB group	Bacteroidetes/Chlorobi group	6.18207	39.2	chromosome:NZ_CP021237.1/CP021237.1	-	1	5092	4964	5/19/17	5/30/17	Complete Genome	Lawrence Berkeley National Laboratory	SAMN06924731	GCA_002151545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/545/GCA_002151545.1_ASM215154v1	-	GW460-11-11-14-LB5
Neisseria gonorrhoeae FA19	528352	PRJNA32793	32793	Proteobacteria	Betaproteobacteria	2.12905	52.3	-	ABZJ02	8	2520	2191	12/15/08	3/24/17	Scaffold	Broad Institute	SAMN02595242	GCA_000156835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/835/GCA_000156835.2_Neis_gono_FA19_V2	-	FA19
Streptococcus mutans TCI-148	1074125	PRJNA72001	72001	Terrabacteria group	Firmicutes	1.81941	37	-	AGKQ01	120	1857	1740	10/6/11	3/22/17	Contig	JCVI	SAMN02436531	GCA_000228985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/985/GCA_000228985.2_SMUT4-NEX_25-148	-	TCI-148
Borrelia garinii IPT120	1408846	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.19636	27.9	-	AYAV01	159	1175	690	12/3/13	4/2/17	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378813	GCA_000501815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/815/GCA_000501815.1_BorGarIPT120	-	IPT120
Streptococcus dysgalactiae subsp. equisimilis	119602	PRJNA327242	327242	Terrabacteria group	Firmicutes	2.21031	39.3	-	MCRN01	81	2236	2019	8/13/16	4/5/17	Contig	The UT MD Anderson Cancer Center	SAMN05327345	GCA_001704435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/435/GCA_001704435.1_ASM170443v1	-	ASDSE_96
Methanobrevibacter smithii TS96A	911133	PRJNA59683	59683	Euryarchaeota	Methanobacteria	1.975	30.3	-	AEMB01	47	1859	1750	2/17/11	3/30/17	Contig	Washington University in St.Louis	SAMN02436671	GCA_000190135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/135/GCA_000190135.2_ASM19013v2	21317366	TS96A
Microcystis aeruginosa NaRes975	1914537	PRJNA349124	349124	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.11753	42.4	-	MOLN01	413	5202	4633	11/25/16	4/6/17	Contig	Shandong University	SAMN05921184	GCA_001885655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/655/GCA_001885655.1_ASM188565v1	-	NaRes975
Bradyrhizobium japonicum	375	PRJNA355579	355579	Proteobacteria	Alphaproteobacteria	10.4422	63.3	-	NAFL01	287	10099	9437	4/24/17	8/7/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN06077198	GCA_002108935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/935/GCA_002108935.1_ASM210893v1	28729275	UBMA197
Enterococcus faecalis TX0102	749501	PRJNA47157	47157	Terrabacteria group	Firmicutes	2.87153	37.4	-	AEBD01	40	2873	2762	8/27/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189108	GCA_000147215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/215/GCA_000147215.1_ASM14721v1	-	TX0102
Brucella suis 01-5744	1170703	PRJNA173515	173515	Proteobacteria	Alphaproteobacteria	3.31104	57.2	-	AQKX01	6	3347	3151	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN00839712	GCA_000371085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/085/GCA_000371085.1_Bruc_suis_01-5744_V1	-	Jan-44
Brucella canis	36855	PRJNA289097	289097	Proteobacteria	Alphaproteobacteria	3.28484	57.3	-	LGAQ01	53	3324	3134	7/16/15	4/3/17	Scaffold	"FAVET-INBIOGEN, Universidad de Chile."	SAMN03842025	GCA_001078335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/335/GCA_001078335.1_B.canis_SCL	-	SCL
Clavibacter michiganensis	28447	PRJNA338484	338484	Terrabacteria group	Actinobacteria	3.31386	73.3	-	MDJW01	15	3162	3073	5/19/17	5/24/17	Contig	University of California	SAMN05559655	GCA_002151165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/165/GCA_002151165.1_ASM215116v1	-	CFBP7494
Rhizobium leguminosarum bv. viciae UPM1131	1041143	PRJNA163555	163555	Proteobacteria	Alphaproteobacteria	7.23197	60.9	-	ATYZ01	41	7014	6675	7/15/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02441563	GCA_000427945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/945/GCA_000427945.1_ASM42794v1	-	UPM1131
Treponema pallidum subsp. pallidum	161	PRJNA271237	271237	Spirochaetes	Spirochaetia	1.13986	52.8	chromosome:NZ_CP010565.1/CP010565.1	-	1	1064	1000	6/3/16	4/5/17	Chromosome	University of Washington	SAMN03273358	GCA_001655515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/515/GCA_001655515.1_ASM165551v1	-	UW254B
Borrelia burgdorferi IPT2	1408859	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.21972	28.2	-	AYBI01	195	1244	669	12/3/13	4/2/17	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378826	GCA_000501295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/295/GCA_000501295.1_BorBurgIPT2	-	IPT2
Burkholderia multivorans	87883	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.39091	67.3	-	LPCH01	55	5957	5697	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449396	GCA_001528425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/425/GCA_001528425.1_ASM152842v1	-	MSMB2021WGS
Streptococcus thermophilus	1308	PRJEB14916	335811	Terrabacteria group	Firmicutes	1.73184	39.2	chromosome I:NZ_LT604076.1/LT604076.1	-	1	1847	1555	8/3/16	5/31/17	Complete Genome	Agricultural University of Athens	SAMEA4355128	GCA_900094135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/135/GCA_900094135.1_ASM90009413v1	-	ACA-DC 2
Burkholderia thailandensis TXDOH	441165	PRJNA19541	19541	Proteobacteria	Betaproteobacteria	6.51591	67.7	-	ABBD01	810	6520	5608	6/6/07	5/18/17	Contig	NMRC	SAMN02470666	GCA_000170315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/315/GCA_000170315.1_ASM17031v1	-	TXDOH
Aliivibrio fischeri	668	PRJNA318805	318805	Proteobacteria	Gammaproteobacteria	4.10071	38.3	-	MAJO01	81	3805	3680	7/21/16	4/5/17	Scaffold	Massachusetts Institute of Technology	SAMN04867939	GCA_001690925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/925/GCA_001690925.1_ASM169092v1	-	5F33
Porphyromonas gingivalis SJD5	1297565	PRJNA205614	205614	FCB group	Bacteroidetes/Chlorobi group	2.27549	48.5	-	ASYN01	194	2023	1865	6/23/17	6/26/17	Contig	Shanghai Jiao Tong University School of Medicine	SAMN07255460	GCA_002206065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/065/GCA_002206065.1_SJD5	-	SJD5
Ruminiclostridium thermocellum DSM 2360	572545	PRJNA324615	324615	Terrabacteria group	Firmicutes	3.57758	39.2	chromosome:NZ_CP016502.1/CP016502.1	-	1	3113	2974	7/22/16	4/5/17	Complete Genome	Oak Ridge National Lab	SAMN05210905	GCA_001692755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/755/GCA_001692755.1_ASM169275v1	-	LQRI
Lactobacillus fermentum	1613	PRJNA279953	279953	Terrabacteria group	Firmicutes	1.82248	51.9	-	LBDH01	93	1925	1582	5/18/15	4/3/17	Contig	Federal State Scientific-Industrial Company MICROGEN	SAMN03452288	GCA_001010245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/245/GCA_001010245.1_ASM101024v1	-	90 TC-4
Sulfolobus islandicus M.16.46	1132505	PRJNA80905	80905	TACK group	Crenarchaeota	2.69476	35	-	AHJS01	2	2941	2574	1/25/12	3/30/17	Contig	University of Illinois	SAMN02471810	GCA_000245255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/255/GCA_000245255.2_ASM24525v2	22363207	M.16.46
Lactococcus garvieae	1363	PRJEB17458	351613	Terrabacteria group	Firmicutes	2.16016	38.6	-	FOTJ01	36	2174	2025	10/31/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216438	GCA_900114555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/555/GCA_900114555.1_IMG-taxon_2651870362_annotated_assembly	-	M79
Bifidobacterium adolescentis	1680	PRJNA300965	300965	Terrabacteria group	Actinobacteria	2.37972	59.9	-	LNKF01	26	2074	1920	4/24/17	4/26/17	Contig	University of Parma	SAMN04231312	GCA_002108045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/045/GCA_002108045.1_BadoAD28v1	27035119	AD2-8
Vibrio harveyi	669	PRJNA257174	257174	Proteobacteria	Gammaproteobacteria	5.61989	45	-	JPTM01	563	5321	5055	7/22/15	4/3/17	Contig	Naval Research Laboratory	SAMN02948023	GCA_001185575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/575/GCA_001185575.1_ASM118557v1	-	CAIM1075
Lactobacillus helveticus	1587	PRJNA262972	262972	Terrabacteria group	Firmicutes	1.86766	36.8	-	JRQG01	321	1895	1590	10/10/14	4/2/17	Contig	Consiglio per la Ricerca e la Sperimentazione in Agricoltura	SAMN03093187	GCA_000765465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/465/GCA_000765465.1_ASM76546v1	-	ATCC 10386
Salinispora arenicola CNY282	1169164	PRJNA182424	182424	Terrabacteria group	Actinobacteria	5.75514	69.6	-	ARKV01	67	5219	4924	4/22/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02440475	GCA_000378705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/705/GCA_000378705.1_ASM37870v1	-	CNY282
Lactobacillus casei UCD174	1051659	PRJNA68473	68473	Terrabacteria group	Firmicutes	3.07115	46.4	-	AFYQ01	116	3357	2914	11/2/12	3/30/17	Contig	University of Wisconsin-Madison and Utah State University	SAMN02472002	GCA_000309705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/705/GCA_000309705.1_ASM30970v1	23035691	UCD174
Coxiella burnetii	777	PRJNA394747	394747	Proteobacteria	Gammaproteobacteria	2.00634	42.5	-	NOLV01	34	2194	1995	8/11/17	8/15/17	Scaffold	National Institutes of Health	SAMN07349487	GCA_002247335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/335/GCA_002247335.1_ASM224733v1	-	California 33 RSA329
Streptococcus halotolerans	1814128	PRJNA315085	315085	Terrabacteria group	Firmicutes	2.1821	39.2	chromosome:NZ_CP014835.1/CP014835.1	-	1	2048	1861	3/28/16	4/12/17	Complete Genome	"National Institute for Communicable Disease Control and Prevention, China CDC"	SAMN04562598	GCA_001598035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/035/GCA_001598035.1_ASM159803v1	-	HTS9
Vibrio parahaemolyticus 10296	1238195	PRJNA176629	176629	Proteobacteria	Gammaproteobacteria	5.12149	45.2	-	AYSP01	52	5002	4676	11/27/13	3/18/17	Scaffold	IGS	SAMN02435812	GCA_000500105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/105/GCA_000500105.2_vp10296	-	10296
Aeromonas salmonicida	645	PRJNA264317	264317	Proteobacteria	Gammaproteobacteria	4.55484	58.9	-	JZTG01	47	4249	4004	12/15/15	4/4/17	Contig	Universite Laval	SAMN03395036	GCA_001466435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/435/GCA_001466435.1_ASM146643v1	26753691	Y567
Streptococcus mitis 21/39	1415765	PRJNA225878	225878	Terrabacteria group	Firmicutes	1.98622	39.9	-	AYRR01	48	2001	1836	12/11/13	4/2/17	Contig	"Research Institute of Physical-Chemical Medicine, Moscow, Russia"	SAMN02470846	GCA_000506725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/725/GCA_000506725.1_Sm.str21_39_v1.0	-	21/39
Oenococcus oeni	1247	PRJNA253853	253853	Terrabacteria group	Firmicutes	1.77096	37.9	-	JPEL01	55	1814	1642	7/11/14	3/24/17	Contig	University of Foggia	SAMN02894448	GCA_000725005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/005/GCA_000725005.1_ASM72500v1	25342687	OT4
Aerococcus christensenii	87541	PRJNA308559	308559	Terrabacteria group	Firmicutes	1.63492	39.2	chromosome:NZ_CP014159.1/CP014159.1	-	1	1575	1440	2/1/16	4/11/17	Complete Genome	"Department of Clinical Microbiology, Slagelse Hospital, Denmark"	SAMN04419111	GCA_001543105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/105/GCA_001543105.1_ASM154310v1	27103727	CCUG28831
Campylobacter fetus subsp. testudinum	1507806	PRJNA285160	285160	Proteobacteria	delta/epsilon subdivisions	1.87297	33.1	-	LFLQ01	215	1886	1783	8/5/16	4/5/17	Contig	Utrecht University	SAMN03741799	GCA_001699135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/135/GCA_001699135.1_ASM169913v1	27333878	13S00388-15
Ruminiclostridium thermocellum AD2	1138384	PRJNA82183	82183	Terrabacteria group	Firmicutes	3.55485	39.2	chromosome:NZ_CP013828.1/CP013828.1	-	1	3098	2959	1/8/16	4/5/17	Complete Genome	ORNL	SAMN02470739	GCA_000255615.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/615/GCA_000255615.3_ASM25561v3	22628515	AD2
Leptospira borgpetersenii serovar Hardjo-bovis str. Sponselee	1303729	PRJNA177128	177128	Spirochaetes	Spirochaetia	3.7762	40.2	-	ANMU01	196	3762	3174	3/15/13	4/1/17	Contig	J. Craig Venter Institute	SAMN01801594	GCA_000346975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/975/GCA_000346975.1_gls454016v01	-	Sponselee CDC
Lactobacillus delbrueckii subsp. lactis CRL581	1269760	PRJNA183842	183842	Terrabacteria group	Firmicutes	2.13682	49.6	-	ATBQ01	16	2018	1662	6/10/13	4/1/17	Scaffold	CERELA-CONICET	SAMN02469459	GCA_000409675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/675/GCA_000409675.1_lla_2.6	23929489	CRL581
Yersinia pseudotuberculosis B-6866	1286089	PRJEB1342	187432	Proteobacteria	Gammaproteobacteria	4.26671	47.5	-	CAQY01	243	3902	3617	2/20/13	5/19/17	Contig	UPSUD	SAMEA2272135	GCA_000344055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/055/GCA_000344055.1_ASM34405v1	23580708	B-6866
Brucella abortus	235	PRJNA400357	400357	Proteobacteria	Alphaproteobacteria	3.0954	57.1	chromosome 1:CP023223.1; chromosome 2:CP023224.1	-	2	3157	2833	9/12/17	9/12/17	Chromosome	IZSM-Portici	SAMN07572674	GCA_002290705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/705/GCA_002290705.1_ASM229070v1	-	67761
Methanosarcina barkeri CM1	796385	PRJNA49587	49587	Euryarchaeota	Methanomicrobia	4.50117	39.2	chromosome:NZ_CP008746.1/CP008746.1	-	1	3764	3437	6/3/15	4/3/17	Complete Genome	PGgRc	SAMN02866457	GCA_001027005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/005/GCA_001027005.1_ASM102700v1	26413197	CM1
Streptococcus salivarius	1304	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.09557	40	-	JWGR01	144	1908	1824	7/10/15	4/3/17	Contig	University of Washington	SAMN03196965	GCA_001069855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/855/GCA_001069855.1_ASM106985v1	26230489	1003_SOLI
Shigella boydii	621	PRJNA288161	288161	Proteobacteria	Gammaproteobacteria	4.25844	50.9	-	LSCB01	357	4739	4022	12/15/16	2/26/17	Contig	"University of Maryland, School of Medicine"	SAMN04001686	GCA_001905975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/975/GCA_001905975.1_ASM190597v1	-	600080
Clostridioides difficile NAP08	525259	PRJNA31441	31441	Terrabacteria group	Firmicutes	4.07869	29.2	-	ADNX01	24	3739	3580	5/18/10	3/15/17	Scaffold	BCM	SAMN00001466	GCA_000164175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/175/GCA_000164175.1_ASM16417v1	-	NAP08
Acinetobacter baumannii	470	PRJNA256158	256158	Proteobacteria	Gammaproteobacteria	3.80332	39.2	chromosome:NZ_CP009256.1/CP009256.1	-	1	3628	3461	8/29/14	3/16/17	Complete Genome	University of Manitoba	SAMN02940901	GCA_000746605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/605/GCA_000746605.1_ASM74660v1	25323714	AB031
Candidatus Pelagibacter ubique	198252	PRJEB9287	287342	Proteobacteria	Alphaproteobacteria	0.804609	29.1	-	CVSQ01	62	869	828	6/17/15	4/10/17	Contig	UNIVERSITY OF CALIFORNIA - SAN DIEGO	SAMEA3368569	GCA_001180165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/165/GCA_001180165.1_CLC_assembled_contigs	-	SCGC AAA795-O19
Corynebacterium jeikeium	38289	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.52455	58.9	-	JVOW01	36	2240	2142	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197428	GCA_001055995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/995/GCA_001055995.1_ASM105599v1	26230489	239_CJEI
Ralstonia solanacearum Y45	1072575	PRJNA71179	71179	Proteobacteria	Betaproteobacteria	5.57841	66.9	-	AFWL01	499	5185	4696	8/9/11	5/19/17	Scaffold	Zhejiang University	SAMN02472178	GCA_000223115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/223/115/GCA_000223115.2_ASM22311v2	21994922	Y45
Methanosalsum zhilinae DSM 4017	679901	PRJNA40771	40771	Euryarchaeota	Methanomicrobia	2.13844	39.2	chromosome:NC_015676.1/CP002101.1	-	1	2048	1955	6/13/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02232039	GCA_000217995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/995/GCA_000217995.1_ASM21799v1	-	DSM 4017
Aciduliprofundum boonei T469	439481	PRJNA38403	38403	Euryarchaeota	unclassified Euryarchaeota	1.48678	39.2	chromosome:NC_013926.1/CP001941.1	-	1	1577	1521	2/24/10	4/7/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598523	GCA_000025665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/665/GCA_000025665.1_ASM2566v1	-	T469
Bacillus pumilus	1408	PRJNA270572	270572	Terrabacteria group	Firmicutes	3.7195	41.3	-	JXCN01	56	3867	3730	1/26/15	4/3/17	Scaffold	University of Groningen	SAMN03267271	GCA_000828455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/455/GCA_000828455.1_ASM82845v1	25767247	B4133
Helicobacter pylori B38	592205	PRJNA39685	39685	Proteobacteria	delta/epsilon subdivisions	1.57676	39.2	chromosome:NC_012973.1/FM991728.1	-	1	1565	1414	7/15/09	3/22/17	Complete Genome	Institut Pasteur	SAMEA3138296	GCA_000091345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/091/345/GCA_000091345.1_ASM9134v1	20537153	B38
Helicobacter pylori J99	85963	PRJNA234	234	Proteobacteria	delta/epsilon subdivisions	1.64383	39.2	chromosome:NC_000921.1/AE001439.1	-	1	1607	1469	1/12/99	3/22/17	Complete Genome	ASTRA	SAMN02602990	GCA_000008785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/785/GCA_000008785.1_ASM878v1	9923682	J99
Burkholderia cenocepacia BC7	985077	PRJNA62781	62781	Proteobacteria	Betaproteobacteria	7.96162	66.8	-	ALIZ02	295	7739	7143	1/24/13	3/24/17	Contig	J. Craig Venter Institute	SAMN00255225	GCA_000333135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/135/GCA_000333135.2_gbccbc7v2.0	24136849	-
Lactobacillus reuteri	1598	PRJNA323635	323635	Terrabacteria group	Firmicutes	1.96303	38.7	-	LYWI01	45	2030	1881	6/3/16	4/5/17	Contig	CERELA-CONICET	SAMN05182497	GCA_001657495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/495/GCA_001657495.1_ASM165749v1	-	CRL 1098
Streptococcus thermophilus TH1435	1415776	PRJNA225801	225801	Terrabacteria group	Firmicutes	1.75346	38.8781	chromosome:NZ_CM002369.1/CM002369.1	AYSG01	36	1900	1608	12/11/13	4/18/17	Chromosome	University of Padua	SAMN02401100	GCA_000521285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/285/GCA_000521285.1_TH1435VE	24435859	TH1435
Bacteroides fragilis CL05T00C42	997880	PRJNA64815	64815	FCB group	Bacteroidetes/Chlorobi group	5.30065	43.5	-	AKBY01	12	4765	4516	6/15/12	5/18/17	Contig	Broad Institute	SAMN02463923	GCA_000269525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/525/GCA_000269525.1_PB_Bact_frag_CL05T00C42_V1	22829535	CL05T00C42
Shigella sonnei	624	PRJNA279143	279143	Proteobacteria	Gammaproteobacteria	4.64175	50.6	-	LAJT01	516	5096	4359	7/21/15	2/24/17	Contig	U.S. Food and Drug Administration	SAMN03438038	GCA_001184135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/135/GCA_001184135.1_ASM118413v1	-	BS1058
Acinetobacter baumannii AB0057	480119	PRJNA21111	21111	Proteobacteria	Gammaproteobacteria	4.06388	39.1897	chromosome:NC_011586.2/CP001182.2; plasmid pAB0057:NC_011585.2/CP001183.2	-	2	3971	3812	11/17/08	7/21/17	Complete Genome	Case Western Reserve University	SAMN02603051	GCA_000021245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/245/GCA_000021245.2_ASM2124v2	18931120	AB0057
Bacillus licheniformis S 16	1348578	PRJNA209579	209579	Terrabacteria group	Firmicutes	4.49782	45.6	-	AZYP01	194	4649	4111	2/6/14	4/10/17	Contig	"Dept. of Biotechnology, University of Karachi, Karachi, Pakistan"	SAMN02210741	GCA_000559105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/105/GCA_000559105.1_Draft	-	S 16
Histophilus somni	731	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.25625	37.2	-	LQFS01	77	2127	1980	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366566	GCA_001931295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/295/GCA_001931295.1_ASM193129v1	-	3275HS
Vibrio vulnificus	672	PRJNA258250	258250	Proteobacteria	Gammaproteobacteria	5.24002	46.4	-	JQDV01	455	4928	4437	8/22/14	4/2/17	Contig	Emek Medical center	SAMN02990645	GCA_000743095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/095/GCA_000743095.1_ASM74309v1	25642229	VV4-03
Pseudomonas syringae pv. theae NCPPB 2598	1094175	PRJNA73855	73855	Proteobacteria	Gammaproteobacteria	6.6539	57.8	-	AGNN01	216	6831	5367	12/30/11	5/19/17	Scaffold	University of Exeter	SAMN02471731	GCA_000245395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/395/GCA_000245395.1_ASM24539v1	-	NCPPB 2598
Acinetobacter baumannii	470	PRJNA317553	317553	Proteobacteria	Gammaproteobacteria	3.99043	39.1892	chromosome:NZ_CP015121.1/CP015121.1; plasmid unnamed:NZ_CP015122.1/CP015122.1	-	2	3820	3669	5/2/17	5/6/17	Complete Genome	USAMRIID	SAMN04621185	GCA_002116925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/116/925/GCA_002116925.1_ASM211692v1	-	ab736
Pseudoalteromonas arctica A 37-1-2	1117313	PRJNA77673	77673	Proteobacteria	Gammaproteobacteria	4.72197	39.186	chromosome I:NZ_CP011025.1/CP011025.1; chromosome II:NZ_CP011026.1/CP011026.1; plasmid unnamed:NZ_CP011027.1/CP011027.1	-	3	4290	4061	9/18/17	9/20/17	Complete Genome	Shandong University	SAMN02470925	GCA_000238395.4	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/395/GCA_000238395.4_ASM23839v4	22535931	A 37-1-2
Acinetobacter baumannii	470	PRJNA270223	270223	Proteobacteria	Gammaproteobacteria	4.07398	39.1818	chromosome:NZ_CP010397.1/CP010397.1; plasmid p6200-114.848kb:NZ_CP010398.1/CP010398.1; plasmid p6200-47.274kb:NZ_CP010399.1/CP010399.1; plasmid p6200-9.327kb:NZ_CP010400.1/CP010400.1	-	4	3928	3739	1/5/15	3/16/17	Complete Genome	JCVI	SAMN03263969	GCA_000814345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/345/GCA_000814345.1_ASM81434v1	-	6200
Acinetobacter baumannii	470	PRJNA269083	269083	Proteobacteria	Gammaproteobacteria	4.14461	39.1765	chromosome:NZ_CP021782.1/CP021782.1; plasmid pA85-1:NZ_CP021783.1/CP021783.1; plasmid pA85-1a:NZ_CP021784.1/CP021784.1; plasmid pA85-1b:NZ_CP021785.1/CP021785.1; plasmid pA85-2:NZ_CP021786.1/CP021786.1; plasmid pA85-3:NZ_CP021787.1/CP021787.1	-	6	4068	3913	6/28/17	6/30/17	Complete Genome	University of Melbourne	SAMN07125723	GCA_002210065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/210/065/GCA_002210065.1_ASM221006v1	-	A85
Bifidobacterium longum	216816	PRJEB16276	348860	Terrabacteria group	Actinobacteria	2.39298	60	chromosome I:NZ_LT629712.1/LT629712.1	-	1	2127	1872	10/20/16	4/5/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04489749	GCA_900103055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/055/GCA_900103055.1_IMG-taxon_2636416037_annotated_assembly	-	Su859
Fusobacterium nucleatum subsp. animalis F0419	999414	PRJNA64879	64879	Fusobacteria	Fusobacteriia	2.4247	27	-	AGEH01	4	2362	2234	1/12/12	3/30/17	Scaffold	Broad Institute	SAMN02463936	GCA_000242975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/975/GCA_000242975.1_Fuso_nucl_OT_420_V1	-	OT 420
Agrobacterium tumefaciens	358	PRJNA270650	270650	Proteobacteria	Alphaproteobacteria	5.12235	56.6	-	JXQV01	61	4802	4650	2/9/15	4/10/17	Contig	University of Chicago	SAMN03267957	GCA_000834635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/635/GCA_000834635.1_ASM83463v1	-	MEJ076
Shigella flexneri CDC 796-83	945360	PRJEA60775	60775	Proteobacteria	Gammaproteobacteria	4.68276	50.9	-	AERO01	209	5209	4182	1/27/11	8/4/17	Contig	Virginia Bioinformatics Institute	SAMN02472087	GCA_000193935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/935/GCA_000193935.2_ASM19393v2	-	CDC 796-83
Treponema succinifaciens DSM 2489	869209	PRJNA50825	50825	Spirochaetes	Spirochaetia	2.89743	39.1714	chromosome:NC_015385.1/CP002631.1; plasmid pTRESU01:NC_015386.1/CP002632.1	-	2	2792	2662	4/7/11	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713601	GCA_000195275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/275/GCA_000195275.1_ASM19527v1	21886863	DSM 2489
Methanosarcina barkeri MS	1434108	PRJNA230939	230939	Euryarchaeota	Methanomicrobia	4.57491	39.169	chromosome:NZ_CP009528.1/CP009528.1; plasmid unnamed:NZ_CP009527.1/CP009527.1	-	2	3792	3481	4/7/15	4/3/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN03074575	GCA_000970025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/025/GCA_000970025.1_ASM97002v1	-	MS
Xylella fastidiosa 32	1214121	PRJNA171052	171052	Proteobacteria	Gammaproteobacteria	2.60755	52.5	-	AWYH01	56	2531	2214	12/11/13	4/2/17	Contig	Universidade de Mogi das Cruzes	SAMN02471372	GCA_000506405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/405/GCA_000506405.1_X._fastidiosa_32	24435874	32
Acinetobacter baumannii	470	PRJNA380857	380857	Proteobacteria	Gammaproteobacteria	4.10845	39.1682	chromosome:NZ_CP020586.1/CP020586.1; plasmid pCBA7_1:NZ_CP020585.1/CP020585.1	-	2	4030	3773	4/10/17	4/13/17	Complete Genome	Yonsei University College of medicine	SAMN06650245	GCA_002082645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/645/GCA_002082645.1_ASM208264v1	-	CBA7
Actinobacillus pleuropneumoniae	715	PRJNA266373	266373	Proteobacteria	Gammaproteobacteria	2.274	41.1	-	JSVV01	54	2203	1866	1/12/15	4/2/17	Contig	LNCC	SAMN03162181	GCA_000817515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/515/GCA_000817515.1_ASM81751v1	25745011	780
Leptospira interrogans serovar Copenhageni str. Fiocruz LV3726	996855	PRJNA63809	63809	Spirochaetes	Spirochaetia	4.85714	34.9	-	AFLH02	542	4355	3894	6/7/11	4/10/17	Contig	J. Craig Venter Institute	SAMN00254360	GCA_000216595.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/595/GCA_000216595.3_CA_glsol154	-	Fiocruz LV3726
Acinetobacter baumannii	470	PRJNA273343	273343	Proteobacteria	Gammaproteobacteria	4.1995	39.1641	chromosome:NZ_CP010779.1/CP010779.1; plasmid pAB386:NZ_CP010780.1/CP010780.1	-	2	4091	3911	6/3/15	3/17/17	Complete Genome	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN03290686	GCA_001026965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/965/GCA_001026965.1_ASM102696v1	26981403	XH386
Chlamydophila caviae GPIC	227941	PRJNA228	228	PVC group	Chlamydiae	1.18136	39.1629	chromosome:NC_003361.3/AE015925.1; plasmid pCpGP1:NC_004720.1/AE015926.1	-	2	1039	976	2/14/02	4/17/17	Complete Genome	TIGR	SAMN02603993	GCA_000007605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/605/GCA_000007605.1_ASM760v1	12682364	-
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	4.12162	39.1426	chromosome 1:NZ_CP015483.1/CP015483.1; plasmid pORAB01-1:NZ_CP015484.1/CP015484.1; plasmid pORAB01-2:NZ_CP015485.1/CP015485.1; plasmid pORAB01-3:NZ_CP015486.1/CP015486.1	-	4	4029	3685	5/2/16	8/8/17	Complete Genome	JCVI	SAMN03277095	GCA_000939415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/415/GCA_000939415.2_HGAP_assembly_of_Acinetobacter_baumannii_ORAB01	-	ORAB01
Acinetobacter baumannii	470	PRJDB3154	262988	Proteobacteria	Gammaproteobacteria	4.19032	39.1181	chromosome:NZ_AP014649.1/AP014649.1; plasmid pIOMTU433:NZ_AP014650.1/AP014650.1	-	2	4038	3860	10/2/14	3/16/17	Complete Genome	National Center for Global Health and Medicine	SAMD00020223	GCA_000828935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/935/GCA_000828935.1_ASM82893v1	26471294	IOMTU 433
Helicobacter pylori	210	PRJEB17945	392621	Proteobacteria	delta/epsilon subdivisions	1.66788	39.1	chromosome I:NZ_LT837687.1/LT837687.1	-	1	1655	1491	7/7/17	7/15/17	Complete Genome	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA33005668	GCA_900149805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/805/GCA_900149805.1_BCM-300	-	-
Acinetobacter baumannii	470	PRJNA286787	286787	Proteobacteria	Gammaproteobacteria	3.94783	39.1	chromosome:NZ_CP021342.1/CP021342.1	-	1	3839	3629	5/23/17	5/25/17	Complete Genome	University of Kansas Medical Center	SAMN03770534	GCA_001077555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/555/GCA_001077555.2_ASM107755v2	26294630	B8342
Haemophilus influenzae PittII	374933	PRJNA16404	16404	Proteobacteria	Gammaproteobacteria	1.95429	38	-	AAZI01	25	1979	1792	4/13/07	4/10/17	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393741	GCA_000169835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/835/GCA_000169835.1_ASM16983v1	17550610	PittII
Prochlorococcus marinus str. MIT 9311	167547	PRJNA246696	246696	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.71106	31.2	-	JNAN01	17	1904	1822	9/29/14	4/2/17	Contig	MIT	SAMN02769557	GCA_000760015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/015/GCA_000760015.1_ASM76001v1	25977791	MIT 9311
Mycobacterium bovis BCG str. ATCC 35733	998090	PRJNA63835	63835	Terrabacteria group	Actinobacteria	4.25555	65.4	-	AEZF01	32	4209	3898	3/28/11	5/19/17	Contig	"Microbial Genome Research Center, CASPMI, IM-CAS"	SAMN00771607	GCA_000194035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/035/GCA_000194035.2_ASM19403v2	21478353	ATCC 35733
Mycobacterium avium subsp. paratuberculosis CLIJ644	1029813	PRJNA66637	66637	Terrabacteria group	Actinobacteria	4.70798	69.2	-	AFNR01	636	4712	4118	6/6/11	5/19/17	Contig	The Commonwealth Scientific and Industrial Research Organisation (CSIRO)	SAMN00222102	GCA_000215815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/815/GCA_000215815.2_ASM21581v2	-	CLIJ644
Clostridium perfringens CPE str. F4969	451756	PRJNA20031	20031	Terrabacteria group	Firmicutes	3.51027	28.6	-	ABDX01	74	3181	2972	7/11/07	3/30/17	Contig	J. Craig Venter Institute	SAMN02436168	GCA_000171195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/195/GCA_000171195.1_ASM17119v1	-	F4969
Xanthomonas campestris pv. musacearum NCPPB 4380	1094185	PRJNA73879	73879	Proteobacteria	Gammaproteobacteria	4.75164	63.5	-	AKBG01	87	4324	3750	7/17/12	5/19/17	Scaffold	University of Exeter	SAMN00991243	GCA_000277915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/915/GCA_000277915.1_Xcm4380v1	24704974	NCPPB 4380
Veillonella atypica	39777	PRJNA380512	380512	Terrabacteria group	Firmicutes	2.07195	39.1	chromosome:CP020566.1	-	1	1887	1790	4/10/17	4/10/17	Complete Genome	University of Oklahoma HSC	SAMN06644703	GCA_002082765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/765/GCA_002082765.1_ASM208276v1	-	OK5
Acinetobacter baumannii	470	PRJNA380857	380857	Proteobacteria	Gammaproteobacteria	3.97256	39.1	chromosome:NZ_CP020579.1/CP020579.1	-	1	3823	3651	4/10/17	4/13/17	Complete Genome	Yonsei University College of medicine	SAMN06650262	GCA_002082845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/845/GCA_002082845.1_ASM208284v1	-	SAA14
Staphylococcus epidermidis VCU144	904347	PRJNA53777	53777	Terrabacteria group	Firmicutes	2.41368	32	-	AFED01	72	2426	2233	4/20/11	3/22/17	Contig	J. Craig Venter Institute	SAMN00117468	GCA_000205325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/205/325/GCA_000205325.2_ASM20532v2	-	VCU144
Streptococcus thermophilus	1308	PRJNA376088	376088	Terrabacteria group	Firmicutes	1.83913	39.1	chromosome:NZ_CP019935.1/CP019935.1	-	1	1982	1687	3/3/17	4/11/17	Complete Genome	Teagasc Food Research	SAMN06349996	GCA_002012365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/365/GCA_002012365.1_ASM201236v1	-	APC151
Pseudoalteromonas aliena	247523	PRJNA371403	371403	Proteobacteria	Gammaproteobacteria	4.5947	39.1	chromosome:NZ_CP019628.1/CP019628.1	-	1	4088	3845	2/14/17	4/17/17	Complete Genome	Yonsei University	SAMN06298625	GCA_001999225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/225/GCA_001999225.1_ASM199922v1	-	EH1
Pseudomonas fluorescens	294	PRJEB22404	401622	Proteobacteria	Gammaproteobacteria	6.51155	60	chromosome I:LT907842.1	-	1	6151	5814	9/6/17	9/6/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04488487	GCA_900215245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/215/245/GCA_900215245.1_IMG-taxon_2617270901_annotated_assembly	-	ATCC 13525
Streptococcus thermophilus	1308	PRJNA325330	325330	Terrabacteria group	Firmicutes	1.85679	39.1	chromosome:NZ_CP016026.1/CP016026.1	-	1	1984	1671	6/14/16	4/11/17	Complete Genome	"Key Laboratory of Dairy Science, Ministry of Education"	SAMN05226830	GCA_001663795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/795/GCA_001663795.1_ASM166379v1	-	KLDS SM
Acinetobacter baumannii	470	PRJNA290306	290306	Proteobacteria	Gammaproteobacteria	3.97707	39.1	chromosome:NZ_CP014539.1/CP014539.1	-	1	3805	3598	2/25/16	3/19/17	Complete Genome	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN03890257	GCA_001573085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/085/GCA_001573085.1_ASM157308v1	-	XH859
Acinetobacter baumannii	470	PRJNA290306	290306	Proteobacteria	Gammaproteobacteria	3.9084	39.1	chromosome:NZ_CP014541.1/CP014541.1	-	1	3746	3576	2/25/16	3/19/17	Complete Genome	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN03890253	GCA_001573125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/125/GCA_001573125.1_ASM157312v1	-	XH856
Streptococcus thermophilus	1308	PRJNA307645	307645	Terrabacteria group	Firmicutes	1.78744	39.1	chromosome:NZ_CP013939.1/CP013939.1	-	1	1922	1630	1/14/16	4/11/17	Complete Genome	China Agricultural University	SAMN04384202	GCA_001514435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/435/GCA_001514435.1_ASM151443v1	-	S9
Candidatus Thioglobus autotrophicus	1705394	PRJNA272361	272361	Proteobacteria	Gammaproteobacteria	1.51245	39.1	chromosome:NZ_CP010552.1/CP010552.1	-	1	1650	1600	9/17/15	4/11/17	Complete Genome	University of Washington	SAMN03280981	GCA_001293165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/165/GCA_001293165.1_ASM129316v1	"2,649,466,027,434,420"	EF1
Streptococcus thermophilus	1308	PRJNA293401	293401	Terrabacteria group	Firmicutes	1.87652	39.1	chromosome:NZ_CP012588.1/CP012588.1	-	1	2023	1661	9/9/15	4/11/17	Complete Genome	CAU	SAMN04002535	GCA_001280285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/285/GCA_001280285.1_ASM128028v1	-	MN-BM-A01
Pseudomonas fluorescens WH6	746360	PRJNA46613	46613	Proteobacteria	Gammaproteobacteria	6.27087	60.6	chromosome:NZ_CM001025.1/CM001025.1	AEAZ01	1	11764	11277	11/5/10	5/19/17	Chromosome	Oregon State University	SAMN02470777	GCA_000166515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/515/GCA_000166515.1_WH6_v1	20920191	WH6
Streptococcus thermophilus	1308	PRJNA251645	251645	Terrabacteria group	Firmicutes	1.86179	39.1	chromosome:NZ_CP011217.1/CP011217.1	-	1	1993	1684	4/13/15	4/11/17	Complete Genome	Universite Laval	SAMN02850632	GCA_000971665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/665/GCA_000971665.1_ASM97166v1	25999573	SMQ-301
Methanosarcina barkeri 3	1434107	PRJNA230938	230938	Euryarchaeota	Methanomicrobia	4.56045	39.1	chromosome:NZ_CP009517.1/CP009517.1	-	1	3782	3589	4/7/15	4/3/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN03074574	GCA_000970305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/305/GCA_000970305.1_ASM97030v1	-	3
Staphylococcus epidermidis VCU028	904317	PRJNA53717	53717	Terrabacteria group	Firmicutes	2.44985	32	-	AFEH01	61	2462	2296	4/20/11	3/22/17	Contig	J. Craig Venter Institute	SAMN00116866	GCA_000205405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/205/405/GCA_000205405.2_ASM20540v2	-	VCU028
Acinetobacter baumannii	470	PRJNA261783	261783	Proteobacteria	Gammaproteobacteria	3.87577	39.1	chromosome:NZ_CP009534.1/CP009534.1	-	1	3704	3517	10/1/14	3/16/17	Complete Genome	University Hospital- Biomedical Research Institute	SAMN03075316	GCA_000761175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/175/GCA_000761175.1_ASM76117v1	25395646	AbH12O-A2
Streptococcus thermophilus ASCC 1275	1408178	PRJNA222865	222865	Terrabacteria group	Firmicutes	1.8455	39.1	chromosome:NZ_CP006819.1/CP006819.1	-	1	1974	1666	6/6/14	4/11/17	Complete Genome	The University of Hong Kong	SAMN02770279	GCA_000698885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/885/GCA_000698885.1_ASM69888v1	24827399	ASCC 1275
Xanthomonas campestris pv. musacearum NCPPB 4392	1184263	PRJNA163301	163301	Proteobacteria	Gammaproteobacteria	4.72856	63.5	-	AKBI01	162	4309	3750	7/17/12	5/28/17	Scaffold	University of Exeter	SAMN02471739	GCA_000277955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/955/GCA_000277955.1_Xcm4392v1	24704974	NCPPB 4392
Clostridium perfringens NCTC 8239	451757	PRJNA20033	20033	Terrabacteria group	Firmicutes	3.32432	28.7	-	ABDY01	55	2957	2775	7/11/07	3/30/17	Contig	J. Craig Venter Institute	SAMN02436239	GCA_000171215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/215/GCA_000171215.1_ASM17121v1	-	str. NCTC 8239
Mycobacterium avium subsp. paratuberculosis CLIJ361	1029812	PRJNA66635	66635	Terrabacteria group	Actinobacteria	4.61239	69	-	AFNS01	1147	4851	3888	6/6/11	5/19/17	Contig	The Commonwealth Scientific and Industrial Research Organisation (CSIRO)	SAMN00222103	GCA_000215835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/835/GCA_000215835.2_ASM21583v2	-	CLIJ361
Mycobacterium bovis BCG str. ATCC 35740	998091	PRJNA63837	63837	Terrabacteria group	Actinobacteria	4.27112	65.4	-	AEZG01	36	4237	3925	3/28/11	5/19/17	Contig	"Microbial Genome Research Center, CASPMI, IM-CAS"	SAMN00771608	GCA_000194055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/055/GCA_000194055.2_ASM19405v2	21478353	ATCC 35740
Prochlorococcus marinus str. MIT 9314	167548	PRJNA246696	246696	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.69056	31.2	-	JNAO01	16	1887	1816	9/29/14	4/2/17	Contig	MIT	SAMN02769558	GCA_000760035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/035/GCA_000760035.1_ASM76003v1	25977791	MIT 9314
Haemophilus influenzae 7P49H1	521005	PRJNA29319	29319	Proteobacteria	Gammaproteobacteria	1.82767	37.9	-	ABWV01	19	1806	1677	5/8/09	3/22/17	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393768	GCA_000173315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/315/GCA_000173315.1_ASM17331v1	22970300	7P49H1
Acinetobacter baumannii NCGM 237	1401639	PRJDB1466	252435	Proteobacteria	Gammaproteobacteria	4.02192	39.1	chromosome:NZ_AP013357.1/AP013357.1	-	1	3918	3710	9/27/13	3/16/17	Complete Genome	"Department of Infectious Diseases, National Center for Global Health and Medicine"	SAMD00061019	GCA_000828795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/795/GCA_000828795.1_ASM82879v1	24550340	NCGM 237
Chlamydia psittaci Mat116	500464	PRJNA28637	28637	PVC group	Chlamydiae	1.16336	39.1	chromosome:CP002744.1	-	1	1058	1017	2/8/13	8/31/17	Complete Genome	"Laboratory of Veterinary Microbiology, Faculty of Applied Biological Sciences, Gifu University"	SAMN02603511	GCA_000338695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/338/695/GCA_000338695.1_ASM33869v1	-	Mat116
Chlamydia psittaci GR9	1218353	PRJNA171913	171913	PVC group	Chlamydiae	1.14715	39.1	chromosome:NC_018620.1/CP003791.1	-	1	1027	952	9/19/12	3/30/17	Complete Genome	"University of Maryland, Baltimore"	SAMN02604207	GCA_000298415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/415/GCA_000298415.1_ASM29841v1	23209198	GR9
Streptococcus thermophilus MN-ZLW-002	1187956	PRJNA159887	159887	Terrabacteria group	Firmicutes	1.84852	39.1	chromosome:NC_017927.1/CP003499.1	-	1	1982	1695	5/14/12	4/11/17	Complete Genome	"School of Food Science and Engineering, Harbin Institute of Technology"	SAMN02603848	GCA_000262675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/675/GCA_000262675.1_ASM26267v1	22843572	MN-ZLW-002
Chlamydia psittaci 01DC11	1112252	PRJNA66479	66479	PVC group	Chlamydiae	1.1722	39.1	chromosome:NC_017289.1/CP002805.1	-	1	1038	978	6/2/11	9/4/17	Complete Genome	Leibniz Institute for Natural Product Research and Infection Biology	SAMN02603517	GCA_000270405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/405/GCA_000270405.1_ASM27040v1	21705611	01DC11
Chlamydia psittaci 02DC15	1112254	PRJNA66481	66481	PVC group	Chlamydiae	1.17218	39.1	chromosome:NC_017292.1/CP002806.1	-	1	1039	981	6/2/11	9/4/17	Complete Genome	Leibniz Institute for Natural Product Research and Infection Biology	SAMN02603518	GCA_000270425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/425/GCA_000270425.1_ASM27042v1	21705611	02DC15
Leptospira interrogans serovar Copenhageni str. Fiocruz LV251	996817	PRJNA63731	63731	Spirochaetes	Spirochaetia	4.62695	35	-	AFJV02	169	4156	3769	6/7/11	4/10/17	Contig	J. Craig Venter Institute	SAMN00254380	GCA_000217295.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/295/GCA_000217295.3_CA_glsol085	-	Fiocruz LV251
Actinobacillus pleuropneumoniae	715	PRJNA266369	266369	Proteobacteria	Gammaproteobacteria	2.26428	41.1	-	JSVY01	53	2204	1794	1/12/15	4/2/17	Contig	LNCC	SAMN03162177	GCA_000817525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/525/GCA_000817525.1_ASM81752v1	25745011	5651
Chlamydia psittaci 08DC60	1112267	PRJNA66485	66485	PVC group	Chlamydiae	1.17203	39.1	chromosome:NC_017290.1/CP002807.1	-	1	1036	972	6/2/11	9/4/17	Complete Genome	Leibniz Institute for Natural Product Research and Infection Biology	SAMN02603520	GCA_000270445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/445/GCA_000270445.1_ASM27044v1	21705611	08DC60
Xylella fastidiosa 6c	1211847	PRJNA170939	170939	Proteobacteria	Gammaproteobacteria	2.60398	52.3559	plasmid pXF6c:NZ_CM007617.1/CM007617.1	AXBS02	19	2547	2251	12/11/13	4/6/17	Contig	Universidade de Mogi das Cruzes	SAMN02471371	GCA_000506905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/905/GCA_000506905.2_ASM50690v2	24435874	6c
Ruminiclostridium thermocellum DSM 1313	637887	PRJNA41553	41553	Terrabacteria group	Firmicutes	3.56162	39.1	chromosome:NC_017304.1/CP002416.1	-	1	3103	2958	1/4/11	9/3/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713572	GCA_000184925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/184/925/GCA_000184925.1_ASM18492v1	21460082	DSM 1313
Streptococcus thermophilus LMG 18311	264199	PRJNA13162	13162	Terrabacteria group	Firmicutes	1.79685	39.1	chromosome:NC_006448.1/CP000023.1	-	1	1925	1621	11/15/04	4/11/17	Complete Genome	"Univ. Catholique de Louvain, Belgium"	SAMN02604079	GCA_000011825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/825/GCA_000011825.1_ASM1182v1	15543133	LMG 18311
Shigella flexneri 4343-70	766160	PRJNA49101	49101	Proteobacteria	Gammaproteobacteria	4.32316	51	-	AFHC01	63	4706	3785	5/12/11	8/4/17	Contig	Institute for Genome Sciences	SAMN00792449	GCA_000213475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/475/GCA_000213475.2_ASM21347v2	-	4343-70
Agrobacterium tumefaciens	358	PRJNA300611	300611	Proteobacteria	Alphaproteobacteria	5.4973	59.4	-	LMVJ01	22	5364	5130	1/26/16	4/4/17	Contig	Monash University Malaysia	SAMN04226578	GCA_001541305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/305/GCA_001541305.1_ASM154130v1	-	NCPPB 3001
Fusobacterium nucleatum CTI-7	1316588	PRJNA197118	197118	Fusobacteria	Fusobacteriia	2.14376	27.2	-	AXNU01	46	2070	1908	10/22/13	4/2/17	Scaffold	Broad Institute	SAMN02597021	GCA_000479205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/205/GCA_000479205.1_Fuso_nucl_CTI-7_V1	-	CTI-7
Bifidobacterium longum E18	1322347	PRJNA197134	197134	Terrabacteria group	Actinobacteria	2.37297	60	chromosome:NZ_CM002287.1/CM002287.1	AUYD01	1	2124	1942	11/20/13	4/2/17	Chromosome	Ulm University	SAMN02471972	GCA_000497735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/735/GCA_000497735.1_BLONGv1.0	24356845	E18
Streptococcus thermophilus CNRZ1066	299768	PRJNA13163	13163	Terrabacteria group	Firmicutes	1.79623	39.1	chromosome:NC_006449.1/CP000024.1	-	1	1936	1638	11/15/04	4/11/17	Complete Genome	"Institut National de la Recherche Agronomique, France"	SAMN02603344	GCA_000011845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/845/GCA_000011845.1_ASM1184v1	15543133	CNRZ1066
Helicobacter pylori Gambia94/24	907240	PRJNA53317	53317	Proteobacteria	delta/epsilon subdivisions	1.71247	39.0975	chromosome:NC_017371.1/CP002332.1; plasmid unnamed:NC_017364.1/CP002333.1	-	2	1682	1528	1/6/11	3/22/17	Complete Genome	"Berg lab, Washington University Medical Shool"	SAMN02603024	GCA_000185205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/205/GCA_000185205.1_ASM18520v1	-	Gambia94/24
Acinetobacter baumannii	470	PRJEB14024	321998	Proteobacteria	Gammaproteobacteria	4.05077	39.0925	chromosome 1:NZ_LT594095.1/LT594095.1; plasmid 2:NZ_LT594096.1/LT594096.1	-	2	3948	3772	6/11/16	4/24/17	Complete Genome	WTSI	SAMEA2439285	GCA_900088705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/705/GCA_900088705.1_26872B01	-	BAL062
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	4.26763	39.0881	chromosome:NZ_CP018254.1/CP018254.1; plasmid pAF-401:NZ_CP018255.1/CP018255.1	-	2	4153	3925	12/9/16	3/20/17	Complete Genome	JCVI	SAMN06077191	GCA_001896005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/005/GCA_001896005.1_ASM189600v1	-	AF-401
Pseudomonas syringae pv. actinidiae CFBP 7286	1094176	PRJNA73857	73857	Proteobacteria	Gammaproteobacteria	6.13948	58.5	-	AGNO01	351	5806	5408	12/30/11	5/19/17	Scaffold	University of Exeter	SAMN02471738	GCA_000245415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/415/GCA_000245415.1_ASM24541v1	-	CFBP 7286
Vibrio vulnificus	672	PRJNA258249	258249	Proteobacteria	Gammaproteobacteria	5.24989	46.4	-	JQDW01	388	4973	4476	8/22/14	4/2/17	Contig	Emek Medical center	SAMN02990644	GCA_000743105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/105/GCA_000743105.1_ASM74310v1	25642229	VV9-09
Histophilus somni	731	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.10225	37.1	-	LQFZ01	40	1926	1808	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366573	GCA_001931375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/375/GCA_001931375.1_ASM193137v1	-	3473HS
Bacillus licheniformis	1402	PRJNA240625	240625	Terrabacteria group	Firmicutes	4.19441	46.2	-	JFYM01	40	4346	4181	5/22/14	4/2/17	Contig	Bacillus licheniformis 3F-3	SAMN02678191	GCA_000695465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/465/GCA_000695465.1_3F	24970831	3F-3
Streptococcus thermophilus LMD-9	322159	PRJNA13773	13773	Terrabacteria group	Firmicutes	1.86418	39.0878	chromosome:NC_008532.1/CP000419.1; plasmid 1:NC_008500.1/CP000420.1; plasmid 2:NC_008501.1/CP000421.1	-	3	2000	1681	10/13/06	4/11/17	Complete Genome	"US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc."	SAMN02598313	GCA_000014485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/485/GCA_000014485.1_ASM1448v1	17030793	LMD-9
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.71296	50.7	-	CXLH01	387	5313	4532	7/16/15	2/24/17	Contig	SC	SAMEA2164638	GCA_001246155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/155/GCA_001246155.1_8290_4_93	-	124528
Bacteroides fragilis str. 2-F-2 #7	1339282	PRJNA206113	206113	FCB group	Bacteroidetes/Chlorobi group	5.65571	43.5	-	JGCO01	363	5107	4627	3/20/14	4/18/17	Contig	IGS	SAMN02314427	GCA_000598145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/145/GCA_000598145.1_ASM59814v1	-	2-F-2 #7
Streptococcus thermophilus TH1436	1423145	PRJNA227503	227503	Terrabacteria group	Firmicutes	1.78213	38.8979	chromosome:NZ_CM002370.1/CM002370.1	AYTT01	28	1923	1650	12/11/13	4/10/17	Chromosome	University of Padua	SAMN02402367	GCA_000521305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/305/GCA_000521305.1_TH1436VE	24435859	TH1436
Lactobacillus reuteri	1598	PRJNA337947	337947	Terrabacteria group	Firmicutes	2.15106	38.8	-	MCNS01	74	2077	1905	8/16/16	4/5/17	Contig	RTI International	SAMN05514174	GCA_001705505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/505/GCA_001705505.1_ASM170550v1	-	P43
Burkholderia cenocepacia K56-2Valvano	985076	PRJNA62783	62783	Proteobacteria	Betaproteobacteria	7.75026	67	-	ALJA02	19	7335	6979	1/24/13	3/24/17	Contig	J. Craig Venter Institute	SAMN00255233	GCA_000333155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/155/GCA_000333155.2_gbcckv2.0	24136849	K56-2Valvano
Helicobacter pylori HUP-B14	1163743	PRJNA95277	95277	Proteobacteria	delta/epsilon subdivisions	1.60758	39.0866	chromosome:NC_017733.1/CP003486.1; plasmid pHPB14:NC_017734.1/CP003487.1	-	2	1574	1429	4/19/12	3/22/17	Complete Genome	"Dept. Molec. Microbiology, Washington University Medical School in Saint Louis"	SAMN02603197	GCA_000259235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/235/GCA_000259235.1_ASM25923v1	-	HUP-B14
Helicobacter pylori HPAG1	357544	PRJNA16183	16183	Proteobacteria	delta/epsilon subdivisions	1.60574	39.0842	chromosome:NC_008086.1/CP000241.1; plasmid pHPAG1:NC_008087.1/CP000242.1	-	2	1588	1429	6/6/06	3/22/17	Complete Genome	Washington University (WashU)	SAMN02604311	GCA_000013245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/245/GCA_000013245.1_ASM1324v1	16788065	HPAG1
Bacillus pumilus	1408	PRJNA274796	274796	Terrabacteria group	Firmicutes	3.64362	41.6	-	LFGZ01	16	3740	3608	7/20/15	4/3/17	Scaffold	University of Rhode Island	SAMN03329560	GCA_001183525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/525/GCA_001183525.1_ASM118352v1	26337873	RI06-95
Acinetobacter baumannii 1656-2	696749	PRJNA42153	42153	Proteobacteria	Gammaproteobacteria	4.02311	39.0831	chromosome:NC_017162.1/CP001921.1; plasmid ABKp1:NC_017163.1/CP001922.1; plasmid ABKp2:NC_017164.1/CP001923.1	-	3	3922	3705	2/8/11	3/15/17	Complete Genome	Kyungpook National University	SAMN02603494	GCA_000188215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/215/GCA_000188215.1_ASM18821v1	22038960	1656-2
Acinetobacter baumannii	470	PRJNA380857	380857	Proteobacteria	Gammaproteobacteria	4.02848	39.078	chromosome:NZ_CP020595.1/CP020595.1; plasmid pUSA15_1:NZ_CP020594.1/CP020594.1	-	2	3896	3716	4/10/17	4/13/17	Complete Genome	Yonsei University College of medicine	SAMN06650240	GCA_002082825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/825/GCA_002082825.1_ASM208282v1	-	USA15
Ralstonia solanacearum	305	PRJNA241399	241399	Proteobacteria	Betaproteobacteria	5.24095	66.8	-	JNVP03	165	4682	4423	6/18/14	4/3/17	Scaffold	Canadian Food Inspection Agency	SAMN02863150	GCA_000710135.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/135/GCA_000710135.3_ASM71013v3	26272559	CFIA906
Corynebacterium jeikeium	38289	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.28545	63	-	JUNC01	57	2021	1936	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03198150	GCA_001059385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/385/GCA_001059385.1_ASM105938v1	26230489	931_CJEI
Candidatus Pelagibacter ubique	198252	PRJEB9287	287342	Proteobacteria	Alphaproteobacteria	1.00914	29	-	CVSS01	62	1095	1022	6/17/15	4/10/17	Contig	UNIVERSITY OF CALIFORNIA - SAN DIEGO	SAMEA3368570	GCA_001180185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/185/GCA_001180185.1_CLC_assembled_contigs	-	SCGC AAA795-O20
Helicobacter pylori Sat464	794851	PRJNA49453	49453	Proteobacteria	delta/epsilon subdivisions	1.56757	39.0742	chromosome:NC_017359.1/CP002071.1; plasmid pHPSAT464:NC_017356.1/CP002072.1	-	2	1553	1419	10/1/10	3/22/17	Complete Genome	"Dept. Molec. Microbiology, Washintgton University Medical School in Saint Louis"	SAMN02603200	GCA_000148915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/915/GCA_000148915.1_ASM14891v1	-	Sat464
Clostridioides difficile NAP07	525258	PRJNA31439	31439	Terrabacteria group	Firmicutes	3.90547	28.5	-	ADVM01	33	3560	3422	5/20/10	3/15/17	Scaffold	BCM	SAMN00001465	GCA_000164655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/655/GCA_000164655.1_ASM16465v1	-	NAP07
Shigella boydii	621	PRJNA288169	288169	Proteobacteria	Gammaproteobacteria	4.30732	50.7	-	LPTM01	471	4947	4033	12/15/16	2/26/17	Contig	"University of Maryland, School of Medicine"	SAMN04001694	GCA_001905995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/995/GCA_001905995.1_ASM190599v1	-	601276
Streptococcus salivarius	1304	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.27166	39.5	-	JUVN01	188	2126	2023	7/10/15	4/3/17	Contig	University of Washington	SAMN03197931	GCA_001074945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/945/GCA_001074945.1_ASM107494v1	26230489	726_SSAL
Acinetobacter baumannii MDR-TJ	889738	PRJNA52959	52959	Proteobacteria	Gammaproteobacteria	4.15341	39.0716	chromosome:NC_017847.1/CP003500.1; plasmid pABTJ1:NC_017848.1/CP003501.1; plasmid pABTJ2:NC_020524.1/CP004359.1	-	3	4071	3884	5/2/12	5/18/17	Complete Genome	"Centre of Bioinformatics, Tianjin University, Tianjin 300072, China"	SAMN02603104	GCA_000187205.4	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/205/GCA_000187205.4_ASM18720v4	"2,139,855,222,952,140"	MDR-TJ
Brucella abortus	235	PRJNA400357	400357	Proteobacteria	Alphaproteobacteria	3.40671	56.6146	chromosome 1:NZ_CP023217.1/CP023217.1; chromosome 2:NZ_CP023218.1/CP023218.1	-	2	3233	2880	9/12/17	9/14/17	Chromosome	IZSM-Portici	SAMN07572671	GCA_002290725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/725/GCA_002290725.1_ASM229072v1	-	49188
Yersinia pseudotuberculosis B-7194	1324608	PRJEB1802	200904	Proteobacteria	Gammaproteobacteria	4.42712	47.4	-	CBKS01	240	4031	3820	5/22/13	4/1/17	Contig	UPSUD	SAMEA2272412	GCA_000403705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/705/GCA_000403705.1_B-7194	23868131	B-7194
Lactobacillus delbrueckii subsp. lactis	29397	PRJEB5823	240978	Terrabacteria group	Firmicutes	2.05158	49.5	-	CCDS01	23	2046	1784	6/11/14	4/2/17	Scaffold	INRA-MIG	SAMEA2547923	GCA_000751235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/235/GCA_000751235.1_LBCNRZ333_V1	-	-
Leptospira borgpetersenii serovar Javanica str. L0066	1291207	PRJNA189020	189020	Spirochaetes	Spirochaetia	3.87956	40.1	-	AOUW01	93	3736	3432	3/1/13	4/1/17	Contig	J. Craig Venter Institute	SAMN01920625	GCA_000353225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/225/GCA_000353225.1_CA_glsol174	-	L0066
Acinetobacter baumannii	470	PRJNA296424	296424	Proteobacteria	Gammaproteobacteria	4.07636	39.0708	chromosome:NZ_CP016298.1/CP016298.1; plasmid pCMCVTAb1-AB59:NZ_CP016299.1/CP016299.1	-	2	3910	3731	12/27/16	3/21/17	Complete Genome	Virginia Tech	SAMN04096369	GCA_001922225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/225/GCA_001922225.1_ASM192222v1	-	CMC-MDR-Ab59
Campylobacter fetus subsp. testudinum	1507806	PRJNA285173	285173	Proteobacteria	delta/epsilon subdivisions	1.7967	32.9	-	LELD01	108	1812	1727	8/5/16	4/5/17	Contig	Utrecht University	SAMN03741918	GCA_001699175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/175/GCA_001699175.1_ASM169917v1	27333878	CFT12S05168
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	4.0931	39.0705	chromosome:NZ_CP018256.1/CP018256.1; plasmid pAF-673:NZ_CP018257.1/CP018257.1	-	2	3930	3728	12/9/16	3/20/17	Complete Genome	JCVI	SAMN06077192	GCA_001895985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/985/GCA_001895985.1_ASM189598v1	-	AF-673
Oenococcus oeni	1247	PRJNA253780	253780	Terrabacteria group	Firmicutes	1.7671	37.9	-	JPEJ01	60	1804	1637	7/11/14	3/24/17	Contig	University of Foggia	SAMN02892995	GCA_000725015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/015/GCA_000725015.1_ASM72501v1	25342687	OT5
Streptococcus mitis 27/7	1415766	PRJNA225879	225879	Terrabacteria group	Firmicutes	1.92315	40.3	-	AYRS01	54	1964	1819	12/11/13	4/2/17	Contig	"Research Institute of Physical-Chemical Medicine, Moscow, Russia"	SAMN02470839	GCA_000506765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/765/GCA_000506765.1_Sm.str27_7_v1.0	-	27/7
Aeromonas salmonicida subsp. smithia	80745	PRJNA264317	264317	Proteobacteria	Gammaproteobacteria	4.30764	58.7	-	JZTI01	344	4365	3485	12/15/15	4/4/17	Contig	Universite Laval	SAMN03396265	GCA_001466445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/445/GCA_001466445.1_ASM146644v1	26753691	JF4097
Vibrio parahaemolyticus 12310	1238196	PRJNA176630	176630	Proteobacteria	Gammaproteobacteria	5.13983	45.3	-	AYXP01	63	4978	4737	12/2/13	3/18/17	Scaffold	IGS	SAMN01924261	GCA_000500755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/755/GCA_000500755.2_vp12310	-	12310
Acinetobacter baumannii	470	PRJNA291316	291316	Proteobacteria	Gammaproteobacteria	4.1394	39.0657	chromosome:NZ_CP013924.1/CP013924.1; plasmid pKBN10P02143:NZ_CP013925.1/CP013925.1	-	2	4036	3841	1/14/16	3/19/17	Complete Genome	Kyungpook national university hospital	SAMN03941550	GCA_001514375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/375/GCA_001514375.1_ASM151437v1	27143492	KBN10P02143
Coxiella burnetii	777	PRJNA394747	394747	Proteobacteria	Gammaproteobacteria	2.19202	42.3	-	NOLN01	33	2346	2068	8/11/17	8/15/17	Scaffold	National Institutes of Health	SAMN07349495	GCA_002247545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/545/GCA_002247545.1_ASM224754v1	-	Dugway 7D77-80
Lactobacillus casei UW1	1051660	PRJNA68475	68475	Terrabacteria group	Firmicutes	2.86554	46.4	-	AFYR01	143	3182	2578	11/2/12	3/30/17	Contig	University of Wisconsin-Madison and Utah State University	SAMN02472003	GCA_000309725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/725/GCA_000309725.1_ASM30972v1	23035691	UW1
Salinispora arenicola CNY234	1169165	PRJNA182423	182423	Terrabacteria group	Actinobacteria	5.56942	69.6	-	ARKU01	51	5023	4762	4/23/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02440997	GCA_000380945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/945/GCA_000380945.1_ASM38094v1	-	CNY234
Lactobacillus helveticus	1587	PRJNA310688	310688	Terrabacteria group	Firmicutes	2.12783	36.6	-	LSVI01	334	2242	1783	2/25/16	4/5/17	Contig	University of Parma	SAMN04453674	GCA_001572805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/805/GCA_001572805.1_ASM157280v1	-	Lh 12
Vibrio harveyi	669	PRJNA257174	257174	Proteobacteria	Gammaproteobacteria	5.62383	45	-	JPTN01	921	5324	4984	7/22/15	4/4/17	Contig	Naval Research Laboratory	SAMN02948024	GCA_001185585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/585/GCA_001185585.1_ASM118558v1	-	CAIM148
Bifidobacterium adolescentis	1680	PRJNA300965	300965	Terrabacteria group	Actinobacteria	2.20856	59.5	-	LNKH01	17	1834	1697	4/24/17	4/26/17	Contig	University of Parma	SAMN04231314	GCA_002108075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/075/GCA_002108075.1_BadoAL462v1	27035119	AL46-2
Lactococcus garvieae TRF1	1380772	PRJNA213887	213887	Terrabacteria group	Firmicutes	2.20491	38.5	-	AVFE01	112	2394	2243	12/3/13	1/8/14	Contig	Gateway Technical College	SAMN02469805	GCA_000504505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/505/GCA_000504505.1_NGEN_DNA_Star_	-	TRF1
Lactobacillus fermentum L930BB	1407052	PRJEB4718	287891	Terrabacteria group	Firmicutes	1.97184	52.1	-	CBUR01	72	1979	1772	1/9/15	4/3/17	Contig	ERA7	SAMEA3158477	GCA_001039735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/735/GCA_001039735.1_LFE2	-	L930BB
Chlamydia psittaci MN	1218354	PRJNA171914	171914	PVC group	Chlamydiae	1.17598	39.0605	chromosome:NC_018627.1/CP003792.1; plasmid pcpMN:NC_018636.1/CP003815.1	-	2	1039	960	9/19/12	3/30/17	Complete Genome	"University of Maryland, Baltimore"	SAMN02604208	GCA_000298435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/435/GCA_000298435.2_ASM29843v2	23209198	MN
Porphyromonas gingivalis	837	PRJEB10280	362716	FCB group	Bacteroidetes/Chlorobi group	2.34328	48.3	-	FUFC01	56	2109	1918	2/2/17	4/6/17	Contig	"Melbourne Dental School, University of Melbourne"	SAMEA3505342	GCA_900157325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/325/GCA_900157325.1_3A1	-	3A1
Aliivibrio fischeri	668	PRJNA318805	318805	Proteobacteria	Gammaproteobacteria	4.15499	38.3	-	MAJP01	93	3850	3710	7/21/16	4/5/17	Scaffold	Massachusetts Institute of Technology	SAMN04867938	GCA_001690945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/945/GCA_001690945.1_ASM169094v1	-	5F306
Burkholderia thailandensis Bt4	441164	PRJNA19533	19533	Proteobacteria	Betaproteobacteria	6.556	67.6	-	ABBH01	803	6558	5661	6/6/07	5/18/17	Contig	NMRC	SAMN02470658	GCA_000170395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/395/GCA_000170395.1_ASM17039v1	-	Bt4
Chlamydia psittaci WC	1218358	PRJNA171918	171918	PVC group	Chlamydiae	1.17982	39.0603	chromosome:NC_018624.1/CP003796.1; plasmid pcpWC:NC_018639.1/CP003818.1	-	2	1044	970	9/19/12	3/30/17	Complete Genome	"University of Maryland, Baltimore"	SAMN02604212	GCA_000298515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/515/GCA_000298515.2_ASM29851v2	23209198	WC
Burkholderia multivorans	87883	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.15916	67	-	LPCT01	99	5858	5608	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449412	GCA_001528605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/605/GCA_001528605.1_ASM152860v1	-	HI3534
Borrelia burgdorferi IPT23	1408860	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.15809	28.4	-	AYBJ01	277	1155	607	12/3/13	4/2/17	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378827	GCA_000501315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/315/GCA_000501315.1_BorBurgIPT23	-	IPT23
Treponema pallidum subsp. pallidum	161	PRJNA271237	271237	Spirochaetes	Spirochaetia	1.13978	52.8	chromosome:NZ_CP010566.1/CP010566.1	-	1	1066	1003	6/3/16	4/5/17	Chromosome	University of Washington	SAMN03273359	GCA_001655555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/555/GCA_001655555.1_ASM165555v1	-	UW391B
Rhizobium leguminosarum bv. trifolii TA1	754521	PRJNA63831	63831	Proteobacteria	Alphaproteobacteria	8.61882	60.7	-	AKIA01	6	8506	7964	7/15/13	4/21/17	Scaffold	JGI	SAMN02441074	GCA_000430465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/465/GCA_000430465.1_ASM43046v1	-	TA1
Clavibacter michiganensis	28447	PRJNA338486	338486	Terrabacteria group	Actinobacteria	3.17227	73.5	-	MDJY01	65	2995	2857	5/19/17	5/24/17	Contig	University of California	SAMN05559658	GCA_002151185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/185/GCA_002151185.1_ASM215118v1	-	CFBP8017
Brucella suis 63/198	1160227	PRJNA173580	173580	Proteobacteria	Alphaproteobacteria	3.30813	57.3	-	AQKY01	15	3346	3138	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN00811230	GCA_000371105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/105/GCA_000371105.1_Bruc_suis_63_198_V1	-	63/198
Enterococcus faecalis TX0630	749508	PRJNA47171	47171	Terrabacteria group	Firmicutes	3.22833	37	-	AEBE01	141	3392	3214	8/27/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189115	GCA_000147255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/255/GCA_000147255.1_ASM14725v1	-	TX0630
Bradyrhizobium japonicum	375	PRJNA262497	262497	Proteobacteria	Alphaproteobacteria	10.3266	63	-	JRPN01	248	9921	9376	11/10/14	4/2/17	Scaffold	Tohoku University	SAMN03083461	GCA_000773865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/865/GCA_000773865.1_ASM77386v1	25523773	Is-34
Microcystis aeruginosa KW	1960155	PRJNA374754	374754	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.88943	42.8	-	MVGR01	6	5757	4962	3/13/17	3/15/17	Contig	Korea Research Institute of Bioscience and Biotechnology (KRIBB)	SAMN06339528	GCA_002025445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/445/GCA_002025445.1_KWv02	-	KW
Methanobrevibacter smithii TS96B	911134	PRJNA59685	59685	Euryarchaeota	Methanobacteria	1.86921	30.3	-	AEMC01	45	1765	1681	2/17/11	3/30/17	Contig	Washington University in St.Louis	SAMN02436681	GCA_000190155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/155/GCA_000190155.2_ASM19015v2	21317366	TS96B
Streptococcus dysgalactiae subsp. equisimilis	119602	PRJNA327242	327242	Terrabacteria group	Firmicutes	2.24066	39.2	-	MCRO01	41	2251	2070	8/13/16	4/5/17	Contig	The UT MD Anderson Cancer Center	SAMN05327346	GCA_001704445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/445/GCA_001704445.1_ASM170444v1	-	ASDSE_99
Borrelia garinii IPT130	1408851	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.09428	28.1	-	AYBA01	286	1023	505	12/3/13	4/2/17	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378818	GCA_000501895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/895/GCA_000501895.1_BorGarIPT130	-	IPT130
Streptococcus mutans TCI-149	1074126	PRJNA72003	72003	Terrabacteria group	Firmicutes	1.82264	37	-	AGKR01	117	1856	1729	10/6/11	3/22/17	Contig	JCVI	SAMN02436512	GCA_000229005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/005/GCA_000229005.2_SMUT4-NEX_34-149	-	TCI-149
Neisseria gonorrhoeae PID18	528356	PRJNA32797	32797	Proteobacteria	Betaproteobacteria	2.17364	52.3	-	ABZL01	49	2379	2096	12/15/08	4/11/17	Scaffold	Broad Institute	SAMN02595243	GCA_000156875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/875/GCA_000156875.1_ASM15687v1	-	PID18
Chlamydia psittaci 6BC	331636	PRJNA62889	62889	PVC group	Chlamydiae	1.17922	39.0603	chromosome:NC_017287.1/CP002586.1; plasmid pCps6BC:NC_017288.1/CP002587.1	-	2	1043	988	4/14/11	9/4/17	Complete Genome	"Institute for Genome Sciences, University Of Maryland School of Medicine"	SAMN02603382	GCA_000204255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/255/GCA_000204255.1_ASM20425v1	21622741	6BC
Chlamydia psittaci 02DC21	1112257	PRJNA77087	77087	PVC group	Chlamydiae	1.28774	39.2	-	ATKT01	292	1101	1035	6/25/13	4/1/17	Scaffold	University of Maryland School of Medicine	SAMN00860208	GCA_000415605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/605/GCA_000415605.1_ASM41560v1	-	02DC21
Bifidobacterium animalis subsp. animalis	302912	PRJNA239836	239836	Terrabacteria group	Actinobacteria	1.91501	60.5	-	JGYM01	13	1619	1454	8/18/14	4/2/17	Contig	University of Parma	SAMN02673424	GCA_000741485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/485/GCA_000741485.1_Bifani_sub.ani	"2,508,549,325,107,960"	LMG 10508
Chlamydia psittaci 6BC	331636	PRJNA63149	63149	PVC group	Chlamydiae	1.17921	39.0603	chromosome:NC_015470.1/CP002549.1; plasmid p6BC:NC_015217.1/CP002550.1	-	2	1041	989	3/8/11	9/4/17	Complete Genome	Leibniz Institute for Natural Product Research and Infection Biology	SAMN02603516	GCA_000191925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/925/GCA_000191925.1_ASM19192v1	21441521	6BC
Stenotrophomonas maltophilia AU12-09	1235458	PRJNA174752	174752	Proteobacteria	Gammaproteobacteria	4.5473	66.4	-	APIT01	125	4273	4058	3/14/13	6/16/17	Contig	Griffith University	SAMN02469852	GCA_000346445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/445/GCA_000346445.1_ASM34644v1	23640378	AU12-09
Comamonas testosteroni I2	1440775	PRJNA232439	232439	Proteobacteria	Betaproteobacteria	5.77871	61.9	-	JMRS01	110	5315	5043	7/31/15	4/3/17	Contig	SCELSE & NTU	SAMN02754402	GCA_001189895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/895/GCA_001189895.1_ASM118989v1	-	I2
Bacillus mycoides	1405	PRJNA356812	356812	Terrabacteria group	Firmicutes	5.92043	35.1	-	MRWT01	83	6331	5857	5/5/17	6/15/17	Contig	University of Groningen	SAMN06127739	GCA_002118255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/118/255/GCA_002118255.1_ASM211825v1	-	SB13
Yersinia frederiksenii	29484	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.83122	47.6	-	CTJA01	67	4421	4257	3/26/15	4/3/17	Scaffold	SC	SAMEA859860	GCA_001218185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/185/GCA_001218185.1_4821_8_1	-	120/02
Bifidobacterium bifidum	1681	PRJNA263318	263318	Terrabacteria group	Actinobacteria	2.20434	62.7	-	JSDT01	2	1904	1768	6/5/15	4/3/17	Contig	University of Parma	SAMN03097400	GCA_001020375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/375/GCA_001020375.1_Bbif03v4	25523018	324B
Alteromonas macleodii	28108	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.66711	44.1	-	DCCF01	352	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452225	GCA_002313715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/715/GCA_002313715.1_ASM231371v1	28894102	-
Micrococcus luteus str. modasa	1232675	PRJNA175355	175355	Terrabacteria group	Actinobacteria	2.2797	73.5	-	AMYK02	281	-	-	11/2/12	11/19/13	Contig	Xcelris labs Ltd	SAMN01178441	GCA_000309825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/825/GCA_000309825.2_ASM30982v2	-	modasa
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.13976	41.2	-	CWFC01	80	2085	1903	6/24/15	3/26/17	Contig	SC	SAMEA1032758	GCA_001175165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/165/GCA_001175165.1_6903_8_68	-	EQUI0213
Haemophilus parasuis ST4-2	1399772	PRJNA218836	218836	Proteobacteria	Gammaproteobacteria	2.18899	39.9	-	JJNR01	211	2240	2013	5/13/14	4/2/17	Contig	"Newport Laboratories, A Sanofi company"	SAMN02390865	GCA_000690675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/675/GCA_000690675.1_HparST4-2v1.0	25189591	ST4-2
Pasteurella multocida subsp. multocida P1062	1331042	PRJNA201507	201507	Proteobacteria	Gammaproteobacteria	2.69901	40.6628	chromosome:NZ_CM002276.1/CM002276.1	ASZP02	1	4901	4620	6/21/13	4/2/17	Chromosome	University of Idaho	SAMN02470583	GCA_000413135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/135/GCA_000413135.2_P1062v2	26494687	P1062
Lactobacillus rhamnosus	47715	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.01488	46.6	-	JULF01	319	3053	2831	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03198199	GCA_001068015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/015/GCA_001068015.1_ASM106801v1	26230489	979_LRHA
Acetobacter pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471	940265	PRJEA61317	61317	Proteobacteria	Alphaproteobacteria	2.98239	53.1	-	CADO01	141	2883	2698	1/10/12	3/30/17	Scaffold	Vital-IT - Swiss Institute of Bioinformatics	SAMEA2272494	GCA_000285275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/275/GCA_000285275.1_ASM28527v1	-	type strain:LMG 1262
Vibrio splendidus 1S-124	1191313	PRJNA167018	167018	Proteobacteria	Gammaproteobacteria	5.27275	44.2	-	AJZL02	313	4628	4481	6/25/12	4/5/17	Scaffold	Broad Institute	SAMN02470502	GCA_000272305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/305/GCA_000272305.2_ASM27230v2	22955834	1S-124
Chlamydia psittaci CP3	1050219	PRJNA172450	172450	PVC group	Chlamydiae	1.1757	39.0602	chromosome:NC_018625.1/CP003797.1; plasmid pcpCP3:NC_018634.1/CP003813.1	-	2	1051	907	9/19/12	3/30/17	Complete Genome	"University of Maryland, Baltimore"	SAMN02604213	GCA_000298535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/535/GCA_000298535.2_ASM29853v2	23209198	CP3
Clostridium sporogenes	1509	PRJNA286797	286797	Terrabacteria group	Firmicutes	4.06613	27.9	-	LFPM01	48	3831	3619	2/25/16	4/5/17	Contig	Northern Arizona University	SAMN03780005	GCA_001573855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/855/GCA_001573855.1_ASM157385v1	26939550	ATCC 19404
Chlamydia psittaci 84/55	1218176	PRJNA171856	171856	PVC group	Chlamydiae	1.17955	39.06	chromosome:CP003790.1; plasmid pcp8455:CP003812.1	-	2	1168	1127	9/19/12	1/31/14	Complete Genome	"University of Maryland, Baltimore"	SAMN02604206	GCA_000298375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/375/GCA_000298375.2_ASM29837v2	-	84/55
Bordetella bronchiseptica E012	1458261	PRJNA237086	237086	Proteobacteria	Betaproteobacteria	5.17138	68.2	-	JGWX01	156	5040	4691	5/12/14	4/4/17	Contig	JCVI	SAMN02614581	GCA_000689695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/695/GCA_000689695.2_gbb64v01	25908122	E012
Acinetobacter baumannii	470	PRJNA380857	380857	Proteobacteria	Gammaproteobacteria	4.27355	39.0596	chromosome:NZ_CP020597.1/CP020597.1; plasmid pHWBA8_1:NZ_CP020596.1/CP020596.1	-	2	4115	3892	4/10/17	4/13/17	Complete Genome	Yonsei University College of medicine	SAMN06650239	GCA_002082785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/785/GCA_002082785.1_ASM208278v1	-	HWBA8
Mesorhizobium loti	381	PRJNA399611	399611	Proteobacteria	Alphaproteobacteria	6.48678	63	-	NSFS01	40	6352	6065	9/12/17	9/14/17	Contig	Curtin University	SAMN07540852	GCA_002295055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/055/GCA_002295055.1_ASM229505v1	-	R7ANSx1497
Corynebacterium diphtheriae	1717	PRJNA263521	263521	Terrabacteria group	Actinobacteria	2.49164	53.5	-	JRUZ01	70	2391	2226	3/16/15	4/3/17	Contig	Oswaldo Cruz Institute	SAMN03104762	GCA_000953975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/975/GCA_000953975.1_ASM95397v1	26517665	HC07
[Haemophilus] ducreyi	730	PRJNA270894	270894	Proteobacteria	Gammaproteobacteria	1.66815	38.3	chromosome:CP011222.1	-	1	1633	1455	6/30/15	7/23/15	Chromosome	Indiana University School of Medicine	SAMN03271822	GCA_001043315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/315/GCA_001043315.1_ASM104331v1	-	GU1
Streptococcus gordonii	1302	PRJNA280686	280686	Terrabacteria group	Firmicutes	2.14582	40.6	-	LAWP01	27	2114	2001	3/11/16	4/5/17	Contig	University of Malaya	SAMN03480703	GCA_001589065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/589/065/GCA_001589065.1_ASM158906v1	-	SK12
Acinetobacter baumannii	470	PRJNA243297	243297	Proteobacteria	Gammaproteobacteria	4.06698	39.0467	chromosome:NZ_CP008706.1/CP008706.1; plasmid p1AB5075:NZ_CP008707.1/CP008707.1; plasmid p2AB5075:NZ_CP008708.1/CP008708.1; plasmid p3AB5075:NZ_CP008709.1/CP008709.1	-	4	3970	3820	3/27/15	3/17/17	Complete Genome	University of Washington	SAMN02894434	GCA_000963815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/963/815/GCA_000963815.1_ASM96381v1	25845845	AB5075-UW
Yersinia enterocolitica (type O:9) str. YE212/02	1262463	PRJEB662	194498	Proteobacteria	Gammaproteobacteria	4.56571	47	-	CAQD01	1	4262	4012	4/30/13	3/26/17	Scaffold	WTSI	SAMEA3146284	GCA_001050735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/735/GCA_001050735.1_ASM105073v1	-	YE212/02
Lactobacillus gasseri	1596	PRJNA363050	363050	Terrabacteria group	Firmicutes	1.98798	34.8	-	MTZT01	16	1935	1781	2/17/17	3/2/17	Scaffold	University of Naples Federico II	SAMN06252408	GCA_002007185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/185/GCA_002007185.1_ASM200718v1	-	AL3
Acinetobacter baumannii MDR-ZJ06	497978	PRJNA28333	28333	Proteobacteria	Gammaproteobacteria	4.01143	39.0425	chromosome:NC_017171.1/CP001937.1; plasmid pMDR-ZJ06:NC_017172.1/CP001938.1	-	2	3882	3667	9/23/11	3/15/17	Complete Genome	"State Key Laboratory of Diagnosis and Treatment for Infectious Disease, the First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN02603878	GCA_000226275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/275/GCA_000226275.1_ASM22627v1	21788470	MDR-ZJ06
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.0917	41.6	-	JJQM01	171	3548	3310	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708936	GCA_000979195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/195/GCA_000979195.1_gtlEnvA5udCFS	25756680	1.H.A.2.3
Anaplasma phagocytophilum	948	PRJEB13033	321622	Proteobacteria	Alphaproteobacteria	1.60442	42.1	-	FLLZ01	230	1324	1093	6/2/16	4/5/17	Contig	INRA-MIG	SAMEA4018764	GCA_900088615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/615/GCA_900088615.1_ANAPC4	-	C4
Leuconostoc mesenteroides subsp. cremoris	33965	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.64067	38	-	MPAM01	115	1734	1392	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981463	GCA_002092045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/045/GCA_002092045.1_ASM209204v1	28217118	LMGCF01
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.1578	39.9	-	FPMN01	3	1055	962	5/10/17	5/24/17	Contig	WTSI	SAMEA1094370	GCA_900118905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/905/GCA_900118905.1_7067_6_55	-	99DC7
Lactobacillus acidophilus DSM 20079 = JCM 1132 = NBRC 13951	1423717	PRJDB636	243215	Terrabacteria group	Firmicutes	1.94772	34.6	-	BALR01	26	-	-	4/1/14	7/24/15	Contig	The University of Tokyo	SAMD00013701	GCA_000615165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/165/GCA_000615165.1_ASM61516v1	-	JCM 1132
Bartonella henselae	38323	PRJNA295147	295147	Proteobacteria	Alphaproteobacteria	1.85785	38	-	LOAG01	43	1704	1472	1/4/17	4/10/17	Contig	Anses UMR BIPAR	SAMN04286633	GCA_001932235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/235/GCA_001932235.1_ASM193223v1	-	A244
Pseudoalteromonas sp. Bsw20308	283699	PRJNA177043	177043	Proteobacteria	Gammaproteobacteria	4.83023	39.025	chromosome:NZ_CP013138.1/CP013138.1; plasmid pPBSW1:NZ_CP013139.1/CP013139.1	-	2	4233	3990	11/30/15	4/16/17	Complete Genome	Polar Research Institute of China	SAMN02470817	GCA_000310105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/105/GCA_000310105.2_ASM31010v2	-	BSW20308
Acinetobacter baumannii	470	PRJNA294725	294725	Proteobacteria	Gammaproteobacteria	4.13116	39.0206	chromosome:NZ_CP012952.1/CP012952.1; plasmid pD36-1:NZ_CP012953.1/CP012953.1; plasmid pD36-3:NZ_CP012955.1/CP012955.1; plasmid pD36-4:NZ_CP012956.1/CP012956.1; plasmid pRAY* (pD36-2):NZ_CP012954.1/CP012954.1	-	5	3999	3797	10/19/15	4/10/17	Complete Genome	The University of Sydney	SAMN04029125	GCA_001399655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/655/GCA_001399655.1_ASM139965v1	26679588	D36
Mannheimia haemolytica MhSwine2000	1329903	PRJNA200977	200977	Proteobacteria	Gammaproteobacteria	2.70857	41	-	ATTA01	74	2834	2633	8/2/13	4/1/17	Contig	National Animal Disease Center	SAMN02116557	GCA_000443185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/185/GCA_000443185.1_MhSwine2000v2	-	MhSwine2000
Lactobacillus brevis	1580	PRJNA284430	284430	Terrabacteria group	Firmicutes	2.439	45.9	-	LDEI01	50	2498	2346	1/25/16	4/4/17	Contig	Geneva University Hospitals	SAMN03702532	GCA_001540905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/905/GCA_001540905.1_ASM154090v1	26713450	Lb1595
Mycoplasma gallisepticum	2096	PRJNA325637	325637	Terrabacteria group	Tenericutes	0.948013	31.5	-	MADW01	95	793	676	8/16/16	4/5/17	Contig	University of Georgia	SAMN05263556	GCA_001705745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/745/GCA_001705745.1_ASM170574v1	-	K6208B
Campylobacter coli	195	PRJNA299429	299429	Proteobacteria	delta/epsilon subdivisions	1.75563	31.3118	chromosome:NZ_CP013036.1/CP013036.1; plasmid unnamed:NZ_CP013037.1/CP013037.1	-	2	1827	1714	10/28/15	4/10/17	Chromosome	University of Tulsa	SAMN04202591	GCA_001417655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/655/GCA_001417655.1_ASM141765v1	-	CF2-75
Burkholderia sp. WSM4176	935543	PRJNA169686	169686	Proteobacteria	Betaproteobacteria	9.06525	62.9	-	ARCY01	13	8384	7681	4/19/13	5/18/17	Scaffold	DOE Joint Genome Institute	SAMN02441040	GCA_000372945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/945/GCA_000372945.1_ASM37294v1	-	WSM4176
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.52089	67.3	-	LOWZ01	84	5909	5642	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449250	GCA_001524205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/205/GCA_001524205.1_ASM152420v1	-	FL-7-2-10-S2-D0
Propionibacterium acnes HL002PA1	765115	PRJNA49265	49265	Terrabacteria group	Actinobacteria	2.47718	60	-	ADXW01	14	2489	2361	7/28/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189191	GCA_000144025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/025/GCA_000144025.1_ASM14402v1	-	HL002PA1
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.47562	32.7	-	CUFH01	64	2461	2325	3/31/15	3/26/17	Contig	SC	SAMEA1035146	GCA_001225985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/985/GCA_001225985.1_7068_7_16	-	F033
Mycoplasma bovis	28903	PRJNA306895	306895	Terrabacteria group	Tenericutes	0.937741	29.3	-	LQDU01	71	812	732	1/4/17	4/6/17	Contig	"University of California, Davis"	SAMN04366516	GCA_001930245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/245/GCA_001930245.1_ASM193024v1	-	2377MB
Proteus mirabilis	584	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	3.945	38.7	-	JTAW01	9	3625	3377	11/14/14	7/11/17	Contig	US Food and Drug Administration 	SAMN02934539	GCA_000783465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/465/GCA_000783465.1_ASM78346v1	-	FDAARGOS_85
Acinetobacter baumannii	470	PRJNA348168	348168	Proteobacteria	Gammaproteobacteria	4.09858	39.0054	chromosome:NZ_CP018143.1/CP018143.1; plasmid unnamed:NZ_CP018144.1/CP018144.1	-	2	3977	3790	11/29/16	3/20/17	Complete Genome	307th Hospital of PLA	SAMN06046790	GCA_001887305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/305/GCA_001887305.1_ASM188730v1	-	HRAB-85
Cronobacter sakazakii	28141	PRJNA251817	251817	Proteobacteria	Gammaproteobacteria	4.79652	56.6	-	JOLS01	96	4701	4463	10/9/15	4/4/17	Scaffold	"Nottingham Trent University, UK"	SAMN02840818	GCA_001309235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/235/GCA_001309235.1_ASM130923v1	26438044	716
Klebsiella oxytoca 10-5249	883124	PRJNA52151	52151	Proteobacteria	Gammaproteobacteria	5.99315	54.9	-	AGDO01	9	5684	5477	7/15/15	2/25/17	Scaffold	Broad Institute	SAMN00254038	GCA_001078255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/255/GCA_001078255.1_Kleb_oxyt_10-5249_V1	-	Oct-49
Lactobacillus salivarius	1624	PRJNA321782	321782	Terrabacteria group	Firmicutes	2.26392	32.8	-	LXZR01	114	2352	2145	9/12/17	9/14/17	Contig	Seoul National University	SAMN05003793	GCA_002289605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/605/GCA_002289605.1_ASM228960v1	-	KLA003
Moraxella catarrhalis	480	PRJNA297370	297370	Proteobacteria	Gammaproteobacteria	1.96785	41.5	-	LXHQ01	56	1854	1697	6/3/16	4/5/17	Contig	Drexel University College of Medicine	SAMN04122793	GCA_001656125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/125/GCA_001656125.1_ASM165612v1	26912404	F23
Acinetobacter baumannii	470	PRJNA339687	339687	Proteobacteria	Gammaproteobacteria	4.0386	39.0017	chromosome:NZ_CP017650.1/CP017650.1; plasmid unnamed:NZ_CP017651.1/CP017651.1	-	2	3925	3655	10/21/16	3/20/17	Complete Genome	Korea Basic Science Institute	SAMN05601670	GCA_001806425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/425/GCA_001806425.1_ASM180642v1	-	KAB05
Bifidobacterium breve MCC 0476	1365962	PRJNA215979	215979	Terrabacteria group	Actinobacteria	2.23381	58.6	-	AVQB01	15	1977	1800	8/11/15	4/3/17	Contig	"Food Science and Technology Institute, Morinaga Milk Industry Co., Ltd"	SAMN03978797	GCA_001263845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/845/GCA_001263845.1_ASM126384v1	26236711	MCC 0476
Bacillus weihenstephanensis	86662	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.23383	35.4	-	NIUO01	80	5593	5270	6/19/17	6/22/17	Contig	"OARSA, CFSAN"	SAMN07205616	GCA_002200025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/025/GCA_002200025.1_ASM220002v1	-	MOD1_Bc237
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.26544	36.7	-	LPRO01	16	2396	2262	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305149	GCA_001560195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/195/GCA_001560195.1_GG12_C01_15	-	GG12-C01-15
Streptococcus sanguinis ATCC 29667	997356	PRJNA64743	64743	Terrabacteria group	Firmicutes	2.42935	42.9	-	AFQA01	10	2399	2298	7/7/11	3/30/17	Scaffold	Baylor College of Medicine	SAMN00262642	GCA_000220315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/315/GCA_000220315.1_ASM22031v1	-	ATCC 29667
Staphylococcus saprophyticus	29385	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.62719	33	-	LMYS01	31	2598	2425	9/28/16	4/5/17	Scaffold	Tufts University	SAMN04244234	GCA_001747145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/145/GCA_001747145.1_ASM174714v1	-	889
Vibrio sp. qd031	1603038	PRJNA272636	272636	Proteobacteria	Gammaproteobacteria	4.24976	45.5	-	JXQD01	37	3900	3758	4/18/17	4/21/17	Scaffold	ocean university of china	SAMN03284651	GCA_002100145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/145/GCA_002100145.1_ASM210014v1	-	qd031
Bacillus coagulans	1398	PRJNA270593	270593	Terrabacteria group	Firmicutes	2.9287	47.4	-	LQYG01	124	3014	2777	3/11/16	4/5/17	Scaffold	University of Groningen	SAMN03267277	GCA_001587225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/225/GCA_001587225.1_B4098	27174261	B4098
Paenibacillus polymyxa	1406	PRJNA313061	313061	Terrabacteria group	Firmicutes	5.61303	45.6	-	LTYJ01	164	5141	4714	3/16/16	4/5/17	Contig	Austrian Institute of Technology	SAMN04514634	GCA_001593085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/085/GCA_001593085.1_ASM159308v1	-	CCI-25
Pseudomonas stutzeri B1SMN1	1212549	PRJNA170978	170978	Proteobacteria	Gammaproteobacteria	5.31885	63.4	-	AMVM01	78	5188	4980	6/28/13	4/1/17	Contig	University of Balearic Islands	SAMN02471578	GCA_000416345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/345/GCA_000416345.1_PstB1SMN1_1.0	23929478	B1SMN1
Aeromonas hydrophila 173	1268076	PRJNA183198	183198	Proteobacteria	Gammaproteobacteria	4.78635	61.6	-	AOBN01	74	4438	4219	4/6/13	5/18/17	Contig	University of Malaya	SAMN02471842	GCA_000354675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/675/GCA_000354675.1_de_novo_assembly	-	173
Propionibacterium freudenreichii	1744	PRJEB6438	270202	Terrabacteria group	Actinobacteria	2.60483	67.3	-	CCYQ01	47	2306	2170	12/11/14	4/4/17	Scaffold	INRA STLO	SAMEA2822394	GCA_900000095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/000/095/GCA_900000095.1_CIRM-BIA123	-	CIRM-BIA 123
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.75189	67.2	-	LOTP01	87	7103	6759	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449151	GCA_001522505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/505/GCA_001522505.1_ASM152250v1	-	RF32-BP11
Campylobacter concisus	199	PRJNA280468	280468	Proteobacteria	delta/epsilon subdivisions	1.89155	37.6	-	NDYR01	39	1957	1820	6/4/17	6/6/17	Contig	Institute of Environmental Science and Research (ESR)	SAMN03457020	GCA_002165895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/895/GCA_002165895.1_ASM216589v1	-	Lasto205.94
Flavobacterium psychrophilum	96345	PRJNA302794	302794	FCB group	Bacteroidetes/Chlorobi group	2.82268	32.6	-	LNTQ01	211	2504	2405	1/11/16	4/5/17	Contig	South Dakota State University	SAMN04283745	GCA_001510855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/855/GCA_001510855.1_ASM151085v1	-	17830
Rhodococcus erythropolis JCM 9804	1302251	PRJDB926	243788	Terrabacteria group	Actinobacteria	6.54547	62.4	-	BBFM01	260	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016840	GCA_001313245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/245/GCA_001313245.1_ASM131324v1	-	JCM 9804
Lactobacillus johnsonii	33959	PRJNA384810	384810	Terrabacteria group	Firmicutes	1.9545	34.4	-	NGOG01	88	1856	1740	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848424	GCA_002253245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/245/GCA_002253245.1_ASM225324v1	-	117d
Escherichia albertii	208962	PRJDB3047	301492	Proteobacteria	Gammaproteobacteria	4.77017	49.5	-	BBVQ01	167	4913	4471	11/6/15	2/25/17	Scaffold	University of Miyazaki	SAMD00026652	GCA_001514805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/805/GCA_001514805.1_ASM151480v1	26537224	NIAH_Bird_8
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.73881	47.6	-	MECC01	60	3466	3300	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320424	GCA_001882955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/955/GCA_001882955.1_ASM188295v1	-	11/4175-3k
Streptococcus equinus	1335	PRJEB15698	347439	Terrabacteria group	Firmicutes	1.79705	37.3	-	FNJX01	6	1759	1700	10/20/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487837	GCA_900102715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/715/GCA_900102715.1_IMG-taxon_2608642168_annotated_assembly	-	pGA-7
Pectobacterium carotovorum subsp. brasiliense	180957	PRJNA269231	269231	Proteobacteria	Gammaproteobacteria	4.68059	52	-	JUJN01	31	4258	4088	12/29/14	4/3/17	Contig	Beijing Academy of Agriculture and Forestry Sciences	SAMN03252609	GCA_000808335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/335/GCA_000808335.1_ASM80833v1	-	YC D65
Mycobacterium kansasii	1768	PRJNA317047	317047	Terrabacteria group	Actinobacteria	6.26603	66.1	-	LWCM01	162	5687	5281	4/27/16	4/10/17	Scaffold	University of Lodz	SAMN04599338	GCA_001632975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/975/GCA_001632975.1_Mkan_typeII_1.0	27257194	1010001469
Brachyspira hyodysenteriae	159	PRJNA272555	272555	Spirochaetes	Spirochaetia	3.02	27	-	JXNM01	129	2625	2507	5/26/15	4/3/17	Scaffold	Murdoch University	SAMN03285455	GCA_001013195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/013/195/GCA_001013195.1_ASM101319v1	26098837	Q17
Lactobacillus crispatus	47770	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.01959	36.9	-	LYQU01	62	2063	1858	7/14/17	7/17/17	Contig	University of Minnesota	SAMN04498976	GCA_002218655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/655/GCA_002218655.1_ASM221865v1	-	UMNLC4
Aggregatibacter actinomycetemcomitans SC383s	1440771	PRJNA232408	232408	Proteobacteria	Gammaproteobacteria	2.02966	44.4	-	AZTR01	72	2055	1878	3/23/16	4/5/17	Contig	"Bumgarner laboratory, Department of Microbiology, University of Washington"	SAMN04573012	GCA_001596415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/415/GCA_001596415.1_SC383sv1.0	-	SC383s
Rothia mucilaginosa	43675	PRJNA267549	267549	Terrabacteria group	Actinobacteria	4.22921	51.2	-	JVQB01	1555	-	-	7/10/15	7/13/16	Scaffold	University of Washington	SAMN03197397	GCA_001063985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/985/GCA_001063985.1_ASM106398v1	26230489	204_RMUC
Gardnerella vaginalis JCP7275	1261057	PRJNA181312	181312	Terrabacteria group	Actinobacteria	1.56223	41	-	ATJS01	184	1380	1183	6/25/13	4/1/17	Scaffold	Washington University	SAMN02436832	GCA_000414705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/705/GCA_000414705.1_ASM41470v1	-	JCP7275
Lactobacillus paracasei subsp. paracasei Lpp227	1256214	PRJNA178442	178442	Terrabacteria group	Firmicutes	2.90682	46.3	-	ANKK01	596	3136	2545	6/11/13	4/10/17	Contig	Danone Research	SAMN02641494	GCA_000410055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/055/GCA_000410055.1_ASM41005v1	23894338	Lpp227
Staphylococcus hominis subsp. hominis	145391	PRJNA376656	376656	Terrabacteria group	Firmicutes	2.25323	31.3974	plasmid pKH1:NZ_CM007920.1/CM007920.1	MWPJ01	41	2230	2047	5/22/17	6/2/17	Contig	CENTER FOR INTERDISCIPLINARY STUDIES IN SCIENCE AND TECHNOLOGY	SAMN06445345	GCA_002156675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/675/GCA_002156675.1_ASM215667v1	-	K1
Staphylococcus capitis	29388	PRJNA317599	317599	Terrabacteria group	Firmicutes	2.49343	32.7	-	LWCP01	45	2434	2295	5/24/16	4/5/17	Contig	UC Berkeley	SAMN04621680	GCA_001650395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/395/GCA_001650395.1_ASM165039v1	-	H65
Acinetobacter radioresistens	40216	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.84174	41.9	-	DGAB01	45	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457336	GCA_002382245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/245/GCA_002382245.1_ASM238224v1	28894102	-
Rhodococcus hoagii	43767	PRJNA316970	316970	Terrabacteria group	Actinobacteria	5.19274	68.8	-	LWTU01	40	4814	4708	4/17/17	6/6/17	Contig	The University of Edinburgh	SAMN04880525	GCA_002094395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/395/GCA_002094395.1_ASM209439v1	27638249	PAM2285
Bacillus atrophaeus NBRC 15539	1220587	PRJDB406	172605	Terrabacteria group	Firmicutes	4.1582	43.2	-	BCVV01	37	4171	3950	2/27/16	4/5/17	Contig	National Institute of Technology and Evaluation	SAMD00046985	GCA_001591925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/925/GCA_001591925.1_ASM159192v1	-	NBRC 15539
Klebsiella variicola	244366	PRJEB8302	276432	Proteobacteria	Gammaproteobacteria	5.654	57.7	-	CDPS01	794	5961	5202	2/24/15	2/21/17	Contig	CGS-GL	SAMEA3218002	GCA_000943135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/135/GCA_000943135.1_2b2A_assembly	-	2b2A
Acinetobacter nosocomialis	106654	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.91973	38.7	-	LLDM01	116	3932	3590	11/5/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145643	GCA_001433095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/095/GCA_001433095.1_ASM143309v1	-	ABBL032
Streptomyces griseus subsp. griseus	67263	PRJNA293375	293375	Terrabacteria group	Actinobacteria	7.95846	72.1	-	MDDL01	1244	7106	6191	9/11/16	3/13/17	Scaffold	USDA/ARS/NCAUR	SAMN05558834	GCA_001723125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/125/GCA_001723125.1_ASM172312v1	-	NRRL B-2682
Streptococcus oralis SK10	1095739	PRJNA75161	75161	Terrabacteria group	Firmicutes	1.93835	41.3	-	AJKO01	39	1950	1818	4/2/12	3/30/17	Contig	J. Craig Venter Institute	SAMN00761853	GCA_000257495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/495/GCA_000257495.1_SoralisSK10v1.0	-	SK10
Achromobacter xylosoxidans	85698	PRJNA319130	319130	Proteobacteria	Betaproteobacteria	5.95898	65.8	-	LXPW01	113	5481	5315	5/10/16	4/5/17	Contig	University of Florida	SAMN04943273	GCA_001641525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/525/GCA_001641525.1_ASM164152v1	-	KCJK1732
Pseudomonas syringae pv. persicae	237306	PRJNA280385	280385	Proteobacteria	Gammaproteobacteria	6.34123	58.4	-	LAZV01	201	5984	5548	4/24/15	4/3/17	Contig	Chinese Academy of Inspection and Quarantine	SAMN03460427	GCA_000980905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/905/GCA_000980905.1_ASM98090v1	26044420	NCPPB 2254
Pseudomonas savastanoi pv. phaseolicola	319	PRJNA287073	287073	Proteobacteria	Gammaproteobacteria	5.98868	57.8	-	LGKW01	70	5467	4980	9/18/15	4/4/17	Scaffold	University of Toronto	SAMN03837773	GCA_001294105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/105/GCA_001294105.1_PphNPS3121	-	NPS3121
Pseudoalteromonas sp. NW 4327	998520	PRJNA230030	230030	Proteobacteria	Gammaproteobacteria	4.48241	40.9	-	AZIO01	129	4015	3795	12/17/13	4/17/17	Contig	"School of Environmental Studies, Jadavpur University, Kolkata 700032, India"	SAMN02422963	GCA_000508785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/785/GCA_000508785.1_PseNW1.0	24482504	NW 4327
Vibrio alginolyticus	663	PRJNA288141	288141	Proteobacteria	Gammaproteobacteria	5.2841	44.6	-	LFWH01	84	4856	4670	8/14/15	4/4/17	Contig	Health Canada	SAMN03795179	GCA_001267615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/615/GCA_001267615.1_ASM126761v1	-	RM-10-2
Pediococcus acidilactici	1254	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.04071	42.1	-	JQCC01	31	1996	1904	11/6/15	4/4/17	Scaffold	Shanghai Majorbio	SAMN02797813	GCA_001437115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/115/GCA_001437115.1_ASM143711v1	26415554	DSM 19927
Acinetobacter baumannii	470	PRJNA339689	339689	Proteobacteria	Gammaproteobacteria	4.03871	39.0017	chromosome:NZ_CP017652.1/CP017652.1; plasmid unnamed:NZ_CP017653.1/CP017653.1	-	2	3925	3719	10/21/16	3/20/17	Complete Genome	Korea Basic Science Institute	SAMN05601671	GCA_001806445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/445/GCA_001806445.1_ASM180644v1	-	KAB06
Enterobacter asburiae	61645	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.84995	55.8	-	JWGM01	139	4702	4548	7/10/15	4/3/17	Contig	University of Washington	SAMN03196970	GCA_001052645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/645/GCA_001052645.1_ASM105264v1	26230489	1009_ECLO
Brucella sp. CMUL 013	1906856	PRJNA345556	345556	Proteobacteria	Alphaproteobacteria	3.30481	57.2	-	MKXJ01	55	3381	3147	10/14/16	4/13/17	Contig	LAU	SAMN05869292	GCA_001766405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/405/GCA_001766405.1_ASM176640v1	-	CMUL 013
Pseudomonas amygdali pv. tabaci str. 6605	1189622	PRJNA165717	165717	Proteobacteria	Gammaproteobacteria	6.15929	58	-	AJXI01	283	5688	5206	7/9/12	5/19/17	Contig	University of Exeter	SAMN02471736	GCA_000275945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/945/GCA_000275945.1_ASM27594v1	-	6605
Xanthomonas euvesicatoria	456327	PRJNA267091	267091	Proteobacteria	Gammaproteobacteria	5.0638	64.7	-	JTEL01	498	4688	4031	7/21/16	4/5/17	Contig	Institut de Recherche pour le Developpement	SAMN03177544	GCA_001691375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/375/GCA_001691375.1_XEU_LMG933_E1.0	-	LMG 933
Acinetobacter pittii	48296	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	4.15041	38.7	-	BBTY01	78	4027	3859	2/20/15	4/3/17	Contig	National Institute of Technology and Evaluation	SAMD00020350	GCA_000949755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/755/GCA_000949755.1_ASM94975v1	-	NBRC 110506
Riemerella anatipestifer	34085	PRJNA308364	308364	FCB group	Bacteroidetes/Chlorobi group	2.43072	34.8	-	LUDT01	175	2433	2109	6/20/16	4/5/17	Contig	Sichuan Agricultural University	SAMN04394637	GCA_001670765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/670/765/GCA_001670765.1_RCAD0133	-	RCAD0133
Staphylococcus lugdunensis VCU148	904352	PRJNA53779	53779	Terrabacteria group	Firmicutes	2.51451	33.7	-	JIBR01	56	2426	2254	4/29/14	4/2/17	Contig	J. Craig Venter Institute	SAMN00116837	GCA_000649125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/125/GCA_000649125.1_gslvcu148v01	-	VCU148
Streptococcus anginosus	1328	PRJEB15456	347300	Terrabacteria group	Firmicutes	2.01403	38.9	-	FMKB01	26	2007	1787	10/7/16	4/5/17	Contig	CEBITEC	SAMEA4462041	GCA_900096985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/096/985/GCA_900096985.1_BVI	-	-
Pantoea ananatis	553	PRJNA278206	278206	Proteobacteria	Gammaproteobacteria	4.73297	53.5	-	LDQY01	69	4508	4302	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401371	GCA_001476115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/115/GCA_001476115.1_ASM147611v1	26793183	NS303
Leptospira santarosai str. CBC613	1218595	PRJNA177150	177150	Spirochaetes	Spirochaetia	4.4599	36.1	-	ANIH01	175	4118	3704	3/15/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01801599	GCA_000346995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/995/GCA_000346995.1_gls454166v01	-	CBC613
Citrobacter freundii	546	PRJNA252011	252011	Proteobacteria	Gammaproteobacteria	5.34978	51.5	-	JRSX01	115	5412	5057	10/26/15	4/4/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872768	GCA_001413075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/075/GCA_001413075.1_ASM141307v1	25501822	RU2 LB28
Fusobacterium necrophorum subsp. funduliforme	143387	PRJNA315619	315619	Fusobacteria	Fusobacteriia	2.41886	34.9	-	LVEW01	46	2467	2363	3/25/16	4/5/17	Contig	Aarhus University	SAMN04570264	GCA_001597445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/445/GCA_001597445.1_ASM159744v1	-	F1250
Streptococcus parasanguinis	1318	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.19673	41.5	-	JVGP01	38	2127	2043	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197643	GCA_001071155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/155/GCA_001071155.1_ASM107115v1	26230489	451_SPAR
Agrobacterium sp. B133/95	1841656	PRJNA319063	319063	Proteobacteria	Alphaproteobacteria	7.17246	59.8	-	LXKQ01	76	6806	6590	7/22/16	4/13/17	Scaffold	Oregon State University	SAMN04901297	GCA_001692215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/215/GCA_001692215.1_ASM169221v1	27547538	B133/95
Haemophilus parainfluenzae	729	PRJNA327273	327273	Proteobacteria	Gammaproteobacteria	2.12092	39.5	-	MAQD01	12	2087	1998	7/6/16	7/19/17	Scaffold	Menzies School of Health Research	SAMN05327867	GCA_001680775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/775/GCA_001680775.1_ASM168077v1	-	ATCC 9796
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.95556	55	-	JTCH02	71	4912	4673	11/17/14	3/25/17	Contig	JCVI	SAMN03012823	GCA_000784195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/195/GCA_000784195.2_SPADES_assembly_of_Enterobacter_cloacae_NDC	-	NDC
Vibrio anguillarum	55601	PRJNA267076	267076	Proteobacteria	Gammaproteobacteria	4.13021	44.6198	chromosome I:CP010040.1; chromosome II:CP010041.1; plasmid pJM1:CP016264.1	-	3	3563	3440	2/7/17	2/7/17	Chromosome	University of Copenhagen	SAMN03177576	GCA_001989815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/815/GCA_001989815.1_ASM198981v1	-	T265
Kingella kingae KK97	1348239	PRJEB4187	209172	Proteobacteria	Betaproteobacteria	1.99305	46.6	-	CBRS01	1	1876	1513	8/28/13	4/2/17	Scaffold	URMITE	SAMEA2272792	GCA_000470235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/235/GCA_000470235.1_G115	-	KK97
Streptococcus pseudopneumoniae	257758	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.06959	40.1	-	JVWA01	78	2098	1953	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197242	GCA_001070405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/405/GCA_001070405.1_ASM107040v1	26230489	1272_SPSE
Xanthomonas perforans	442694	PRJNA276636	276636	Proteobacteria	Gammaproteobacteria	5.13296	64.9	-	JZVM01	115	4706	4323	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03379351	GCA_001009545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/545/GCA_001009545.1_ASM100954v1	26089818	GEV893
Streptobacillus moniliformis	34105	PRJNA319313	319313	Fusobacteria	Fusobacteriia	1.61591	26.2	-	LWTF01	160	1513	1383	6/4/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04892745	GCA_001657835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/835/GCA_001657835.1_ASM165783v1	-	B10/15
Klebsiella aerogenes	548	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.98003	55.1	-	LESV01	6	4883	4657	6/19/15	4/6/17	Scaffold	Broad Institute	SAMN03280171	GCA_001030125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/125/GCA_001030125.1_Ente_aero_UCI89_V1	-	UCI89
Leuconostoc pseudomesenteroides 1159	1339246	PRJNA205546	205546	Terrabacteria group	Firmicutes	2.03869	39	-	JAUI01	100	2088	1920	5/8/14	4/9/17	Scaffold	Copenhagen University	SAMN02767913	GCA_000686465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/465/GCA_000686465.1_Leuconostoc	24903866	1159
Staphylococcus pseudintermedius K7	1286307	PRJDB744	201025	Terrabacteria group	Firmicutes	2.7635	37.4	-	BARM01	77	-	-	5/2/13	9/15/15	Contig	Hokkaido University	SAMD00036733	GCA_000390045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/045/GCA_000390045.1_ASM39004v1	23788539	K7
Aeromonas veronii	654	PRJNA296464	296464	Proteobacteria	Gammaproteobacteria	4.68096	58.6	-	LKKF01	45	4338	4123	11/19/15	4/4/17	Contig	Texas Tech University	SAMN04099666	GCA_001446835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/835/GCA_001446835.1_ASM144683v1	26824353	TTU2014-142ASC
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98873	64.1	-	FVCJ01	22	4947	4805	3/10/17	3/18/17	Contig	SC	SAMEA2071353	GCA_900131295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/295/GCA_900131295.1_10665_3_74	-	244
Gallibacterium anatis	750	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.71742	39.5	-	JPJO01	117	2648	2473	11/5/14	4/2/17	Contig	University of Copenhagen	SAMN02900747	GCA_000772425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/425/GCA_000772425.1_ASM77242v1	-	23K10
Mycobacterium africanum MAL010131	1354181	PRJNA211668	211668	Terrabacteria group	Actinobacteria	4.41056	65.5	-	JKZU01	3	4252	4045	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02231135	GCA_000666765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/765/GCA_000666765.1_Myco_afri_MAL010131_V1	-	MAL010131
Pantoea agglomerans	549	PRJEB19545	376324	Proteobacteria	Gammaproteobacteria	4.10462	54.5	-	FUWI01	13	3876	3742	3/4/17	3/11/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03097723	GCA_900167425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/425/GCA_900167425.1_IMG-taxon_2608642108_annotated_assembly	-	NFPP29
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.55675	66.6	-	LOSV01	172	7965	7527	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449128	GCA_001522295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/295/GCA_001522295.1_ASM152229v1	-	RF2-non_BP4
Enterococcus hirae 88-15-E09	1219467	PRJNA172133	172133	Terrabacteria group	Firmicutes	2.853	36.8	-	LGUK01	72	2697	2267	6/30/17	7/3/17	Contig	University of Saskatchewan	SAMN03801243	GCA_002213305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/305/GCA_002213305.1_ASM221330v1	-	88-15-E09
Streptococcus sobrinus TCI-345	1074071	PRJNA71911	71911	Terrabacteria group	Firmicutes	2.21758	43.3	-	AGGU01	456	2266	1973	10/6/11	3/30/17	Contig	JCVI	SAMN02436534	GCA_000228165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/165/GCA_000228165.2_SMUT1-NEX_93-345	-	TCI-345
Geobacillus sp. 46C-IIa	1963025	PRJNA354604	354604	Terrabacteria group	Firmicutes	3.47491	52.1	-	NADR01	51	3541	3296	4/3/17	4/5/17	Scaffold	"Jet Propulsion Laboratory, California Institute of Technology"	SAMN06347030	GCA_002077765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/765/GCA_002077765.1_ASM207776v1	-	46C-IIa
Actinomyces naeslundii	1655	PRJNA347929	347929	Terrabacteria group	Actinobacteria	3.04121	67.7	-	MSRK01	174	2700	2397	1/18/17	1/18/17	Scaffold	King's College London	SAMN05898708	GCA_001956435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/435/GCA_001956435.1_ASM195643v1	-	F6E1
Mycobacterium chelonae	1774	PRJNA347845	347845	Terrabacteria group	Actinobacteria	5.01515	64.1	-	MLIP01	13	4902	4785	10/26/16	4/5/17	Contig	University of Georgia	SAMN05897997	GCA_001853965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/965/GCA_001853965.1_ASM185396v1	-	15514
Vibrio campbellii	680	PRJNA257165	257165	Proteobacteria	Gammaproteobacteria	5.12725	45.7	-	JPTH01	1330	4993	4398	7/22/15	4/3/17	Contig	Naval Research Laboratory	SAMN02948016	GCA_001185385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/385/GCA_001185385.1_ASM118538v1	-	CAIM1500
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28403	32.4	chromosome:AP017593.1	-	1	-	-	1/24/17	1/27/17	Chromosome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053860	GCA_002356875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/875/GCA_002356875.1_ASM235687v1	-	M08024
Campylobacter lanienae	75658	PRJNA340996	340996	Proteobacteria	delta/epsilon subdivisions	1.53161	34.6	-	MJJJ01	31	1560	1482	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687016	GCA_002139275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/275/GCA_002139275.1_ASM213927v1	28854596	P0100
Rhodococcus fascians NBRC 12155 = LMG 3623	1219015	PRJDB294	172262	Terrabacteria group	Actinobacteria	5.77336	64.4	-	BCWW01	36	5422	5284	12/6/16	4/6/17	Contig	National Institute of Technology and Evaluation	SAMD00046773	GCA_001894785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/785/GCA_001894785.1_ASM189478v1	-	NBRC 12155
Piscirickettsia salmonis AUSTRAL-005	1398558	PRJNA218211	218211	Proteobacteria	Gammaproteobacteria	3.5296	39.8	-	AZYQ02	227	3959	3111	2/19/14	4/11/17	Contig	AUSTRAL-omics	SAMN02350403	GCA_000576045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/045/GCA_000576045.2_ASM57604v2	25323708	AUSTRAL-005
Leptospira kirschneri serovar Pomona	561005	PRJNA374548	374548	Spirochaetes	Spirochaetia	4.61594	35.9	-	MVIT01	78	4252	3799	3/3/17	4/11/17	Contig	School of Veterinary Medicine and Animal Science / University of Sao Paulo	SAMN06328787	GCA_002018105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/105/GCA_002018105.1_ASM201810v1	-	M110/06
Salinispora pacifica CNY239	1288090	PRJNA187959	187959	Terrabacteria group	Actinobacteria	5.3686	69.9	-	AUKU01	88	4972	4607	7/10/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02440810	GCA_000424925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/925/GCA_000424925.1_ASM42492v1	-	CNY239
Elizabethkingia anophelis NUH1	1338014	PRJNA205480	205480	FCB group	Bacteroidetes/Chlorobi group	4.33466	35.6	-	ASYH01	59	4019	3895	11/7/13	4/2/17	Contig	SCELSE	SAMN02470987	GCA_000495995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/995/GCA_000495995.1_NUH1	24012265	NUH1
Vibrio cyclitrophicus ZF207	1136173	PRJNA81891	81891	Proteobacteria	Gammaproteobacteria	5.05145	43.5	-	AIDN02	93	4487	4317	3/26/12	4/5/17	Scaffold	Massachusetts Institute of Technology	SAMN02470507	GCA_000256385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/385/GCA_000256385.2_ASM25638v2	22491847	ZF207
Pseudomonas chlororaphis subsp. piscium	1513890	PRJNA285287	285287	Proteobacteria	Gammaproteobacteria	6.85556	62.8	-	LFUT01	17	6154	5967	4/25/16	4/5/17	Contig	JLU	SAMN03788093	GCA_001630695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/630/695/GCA_001630695.1_ASM163069v1	-	PCL1391
Lactobacillus reuteri SD2112	491077	PRJNA30643	30643	Terrabacteria group	Firmicutes	2.31684	39.0014	chromosome:NC_015697.1/CP002844.1; plasmid pLR580:NC_015699.1/CP002848.1; plasmid pLR581:NC_015700.1/CP002845.1; plasmid pLR584:NC_015701.1/CP002847.1; plasmid pLR585:NC_015698.1/CP002846.1	-	5	2332	2132	6/20/11	3/30/17	Complete Genome	Baylor College of Medicine	SAMN00001494	GCA_000159455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/455/GCA_000159455.2_ASM15945v2	-	SD2112
Staphylococcus equorum	246432	PRJNA338661	338661	Terrabacteria group	Firmicutes	2.74676	33	-	MDJP01	64	2651	2537	11/17/16	4/5/17	Scaffold	New Mexico State University	SAMN05560422	GCA_001880995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/995/GCA_001880995.1_ASM188099v1	-	AR8-13
Acinetobacter baumannii	470	PRJNA380857	380857	Proteobacteria	Gammaproteobacteria	4.06698	39.0003	chromosome:NZ_CP020584.1/CP020584.1; plasmid pJBA13_1:NZ_CP020582.1/CP020582.1; plasmid pJBA13_2:NZ_CP020583.1/CP020583.1	-	3	3943	3763	4/10/17	4/13/17	Complete Genome	Yonsei University College of medicine	SAMN06650260	GCA_002082625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/625/GCA_002082625.1_ASM208262v1	-	JBA13
Paeniclostridium sordellii	1505	PRJEB8140	277664	Terrabacteria group	Firmicutes	3.52971	27.3	-	CDNU01	31	3412	3314	3/13/15	4/4/17	Contig	WTSI	SAMEA1572102	GCA_001372675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/675/GCA_001372675.1_JGS445	-	JGS445
Bordetella holmesii CDC-H785-BH	1331211	PRJNA202123	202123	Proteobacteria	Betaproteobacteria	3.56509	62.8	-	JGWB01	161	3622	3137	5/1/14	4/2/17	Contig	JCVI	SAMN02263914	GCA_000662275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/275/GCA_000662275.1_gbb15v01	24948754	CDC-H785-BH
Acinetobacter sp. CIP 56.2	1144672	PRJNA183304	183304	Proteobacteria	Gammaproteobacteria	4.36777	41	-	APPH01	4	4119	3947	4/16/13	5/18/17	Scaffold	Broad Institute	SAMN01087914	GCA_000368445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/445/GCA_000368445.1_Acin_sp_CIP_56_2_V1	-	CIP 56.2
Klebsiella sp. PO552	1972757	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.72343	56.8	-	NFVM01	150	5746	5374	6/9/17	6/12/17	Contig	JCVI	SAMN05960877	GCA_002186515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/515/GCA_002186515.1_ASM218651v1	-	PO552
Flavobacterium sp. Leaf82	1736238	PRJNA297956	297956	FCB group	Bacteroidetes/Chlorobi group	5.67476	33.4	-	LMMA01	37	4776	4663	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151618	GCA_001422725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/725/GCA_001422725.1_Leaf82	26633631	Leaf82
Frankia sp. CcI156	1745380	PRJNA299689	299689	Terrabacteria group	Actinobacteria	5.33059	70	-	MOMD01	145	4723	4313	2/1/17	4/17/17	Contig	University of New Hampshire	SAMN04211878	GCA_001983015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/015/GCA_001983015.1_ASM198301v1	-	CcI156
Bacillus sp. FJAT-18017	1705566	PRJNA293651	293651	Terrabacteria group	Firmicutes	5.26552	42.4	chromosome:NZ_CP012602.1/CP012602.1	-	1	5018	4825	9/4/15	4/11/17	Chromosome	Fujian Academy of Agricultural Sciences	SAMN04009150	GCA_001278805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/805/GCA_001278805.1_ASM127880v1	-	FJAT-18017
Clostridium sp. HMSC19B04	1581181	PRJNA269810	269810	Terrabacteria group	Firmicutes	3.97933	28.5	-	LWPH01	68	3623	3524	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436142	GCA_001806575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/575/GCA_001806575.1_ASM180657v1	-	HMSC19B04
Sphingomonas sp. Leaf33	1736215	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	3.23131	67.4	-	LMLB01	19	3121	3024	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151595	GCA_001421785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/785/GCA_001421785.1_Leaf33	26633631	Leaf33
Streptococcus thermophilus	1308	PRJNA340075	340075	Terrabacteria group	Firmicutes	1.86506	39	chromosome:NZ_CP017064.1/CP017064.1	-	1	1982	1638	9/5/17	9/7/17	Complete Genome	Korea Food Research Institute	SAMN05631197	GCA_002286255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/255/GCA_002286255.1_ASM228625v1	-	ST3
Rhodococcus sp. DK17	186196	PRJNA157361	157361	Terrabacteria group	Actinobacteria	9.10736	67.1	-	AJLQ01	135	8611	7954	5/23/12	5/19/17	Contig	Yonsei University	SAMN02472143	GCA_000263875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/875/GCA_000263875.1_RhoDK17.2	22843580	DK17
Enterobacter sp. BWH 39	1329837	PRJNA201976	201976	Proteobacteria	Gammaproteobacteria	4.99632	55	-	JCLG01	8	4856	4585	2/3/14	4/10/17	Scaffold	Broad Institute	SAMN02138601	GCA_000534475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/475/GCA_000534475.1_Ente_cloa_complex_BWH_39_V1	-	BWH 39
Staphylococcus sp. HMSC055C03	1715082	PRJNA296210	296210	Terrabacteria group	Firmicutes	2.68693	35.8	-	LTJV01	47	2603	2485	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477503	GCA_001809385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/385/GCA_001809385.1_ASM180938v1	-	HMSC055C03
Corynebacterium sp. CMW7794	1603887	PRJNA272119	272119	Terrabacteria group	Actinobacteria	2.77008	63.3	-	LSRB01	78	2564	2433	2/18/16	4/11/17	Scaffold	The Genome Institute at Washington University	SAMN03850947	GCA_001563605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/605/GCA_001563605.1_ASM156360v1	-	CMW7794
Arthrobacter sp. MA-N2	1101188	PRJNA165515	165515	Terrabacteria group	Actinobacteria	4.83379	63	-	AQRI01	5	4526	4309	1/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02597162	GCA_000517125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/125/GCA_000517125.1_ASM51712v1	-	MA-N2
Shewanella sp. JCM 19057	1460651	PRJDB1629	245975	Proteobacteria	Gammaproteobacteria	4.89958	53.1	-	BAXN01	78	-	-	10/1/15	10/1/15	Contig	"Microbe Division/JCM, RIKEN BioResource Center"	SAMD00000388	GCA_001310535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/535/GCA_001310535.1_ASM131053v1	-	JCM 19057
Bradyrhizobium sp. WSM1417	754500	PRJNA61989	61989	Proteobacteria	Alphaproteobacteria	8.04896	63.2	-	AZXU01	1	7628	7292	1/3/14	4/17/17	Scaffold	JGI	SAMN02597277	GCA_000515415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/415/GCA_000515415.1_ASM51541v1	-	WSM1417
Streptococcus sp. DD12	1777880	PRJNA304333	304333	Terrabacteria group	Firmicutes	1.67681	45.2	-	LQRG01	11	1596	1505	3/2/16	4/11/17	Scaffold	University of Kaiserslautern	SAMN04324618	GCA_001578885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/885/GCA_001578885.1_ASM157888v1	27303717	DD12
Mycobacterium sp. TKK-01-0059	1324269	PRJNA198154	198154	Terrabacteria group	Actinobacteria	5.68297	67.9	-	JLXO01	5	5375	5207	6/17/14	4/9/17	Scaffold	Broad Institute	SAMN02053792	GCA_000709305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/305/GCA_000709305.1_Myco_sp_TKK-01-0059_V2	-	TKK-01-0059
Serratia sp. C-1	1286279	PRJEB1344	187441	Proteobacteria	Gammaproteobacteria	5.65161	56.2	-	CAQO01	133	5326	5023	1/31/13	9/8/17	Scaffold	OSU/OARDC	SAMEA2272622	GCA_000336365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/365/GCA_000336365.1_ASM33636v1	-	-
Polaromonas sp. 24-62-144	1970414	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	3.01451	62.4	-	NCHV01	518	3116	2832	8/16/17	8/16/17	Scaffold	None	SAMN06622259	GCA_002281935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/935/GCA_002281935.1_ASM228193v1	-	-
Pantoea sp. VS1	2003658	PRJNA387371	387371	Proteobacteria	Gammaproteobacteria	5.41283	57.3	-	NHZE01	191	5085	4836	6/26/17	6/28/17	Contig	University of Central Florida	SAMN07150515	GCA_002207995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/995/GCA_002207995.1_ASM220799v1	-	VS1
Prevotella sp. ICM33	1161412	PRJNA165919	165919	FCB group	Bacteroidetes/Chlorobi group	3.19288	41	-	JACD01	110	2546	2397	1/13/14	4/9/17	Contig	JCVI	SAMN02597447	GCA_000517825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/825/GCA_000517825.1_PspICM33v1.0	-	ICM33
Enterococcus sp. HMSC073E09	1739405	PRJNA300055	300055	Terrabacteria group	Firmicutes	2.83939	37.3	-	LTWZ01	41	2853	2697	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480064	GCA_001813275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/275/GCA_001813275.1_ASM181327v1	-	HMSC073E09
Lactobacillus sp. HMSC25A02	1581063	PRJNA269832	269832	Terrabacteria group	Firmicutes	2.95789	46.3	-	LWPM01	98	3002	2815	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436219	GCA_001816065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/065/GCA_001816065.1_ASM181606v1	-	HMSC25A02
Novosphingobium sp. SCN 63-17	1660120	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	5.92391	63.5	-	MEGC01	95	5342	5114	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652505	GCA_001725345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/345/GCA_001725345.1_ASM172534v1	26031303	-
Treponema sp. UBA768	1947754	PRJNA348753	348753	Spirochaetes	Spirochaetia	2.10585	38.9	-	DBJU01	165	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452383	GCA_002297245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/245/GCA_002297245.1_ASM229724v1	28894102	-
Citrobacter sp. JT3	1451265	PRJNA234340	234340	Proteobacteria	Gammaproteobacteria	5.35431	53	-	JAQB01	154	5352	5030	12/29/14	4/10/17	Contig	The Singapore Centre on Environmental Life Sciences Engineering	SAMN03273575	GCA_000809165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/165/GCA_000809165.1_ASM80916v1	-	JT3
Methylobacterium sp. Leaf117	1736260	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	5.32057	67.7	-	LMNL01	40	4923	4695	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151640	GCA_001422985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/985/GCA_001422985.1_Leaf117	26633631	Leaf117
Nocardioides sp. Leaf285	1736322	PRJNA297956	297956	Terrabacteria group	Actinobacteria	4.33776	74	-	LMNH01	8	4090	3969	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151712	GCA_001422955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/955/GCA_001422955.1_Leaf285	26633631	Leaf285
Erythrobacter sp. REDSEA-S40_B1	1811536	PRJNA289734	289734	Proteobacteria	Alphaproteobacteria	2.68812	63.7	-	LUNU01	7	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534570	GCA_001626395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/395/GCA_001626395.1_ASM162639v1	27377622	-
Marinobacter sp. es.048	1761795	PRJEB21430	391642	Proteobacteria	Gammaproteobacteria	4.0633	56.9	-	FYFA01	2	3772	3648	6/25/17	7/5/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487881	GCA_900188435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/435/GCA_900188435.1_IMG-taxon_2609459764_annotated_assembly	-	ES.048
Acidovorax sp. JHL-3	1276755	PRJNA195669	195669	Proteobacteria	Betaproteobacteria	3.98798	63.6	-	JAFU01	4	3646	3505	1/14/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02584928	GCA_000526295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/295/GCA_000526295.1_ASM52629v1	-	JHL-3
Psychrobacter sp. TB67	1055815	PRJNA228384	228384	Proteobacteria	Gammaproteobacteria	3.58563	43.4	-	AYYA01	86	3026	2842	12/18/13	4/17/17	Scaffold	University of Florence	SAMN02597462	GCA_000511065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/065/GCA_000511065.1_PsyTB67_v1.0	-	TB67
Caulobacter sp. 12-67-6	1970329	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	3.95554	66.6	-	NCCK01	507	4105	3681	8/16/17	8/16/17	Scaffold	None	SAMN06622400	GCA_002279625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/625/GCA_002279625.1_ASM227962v1	-	-
Janthinobacterium sp. GW456W	1981505	PRJNA383021	383021	Proteobacteria	Betaproteobacteria	6.25825	62.9	-	NEHA01	132	5660	5383	5/11/17	5/22/17	Scaffold	Lawrence Berkeley National Laboratory	SAMN06758627	GCA_002127615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/615/GCA_002127615.1_ASM212761v1	-	GW456W
Eubacterium sp. CAG:252	1262887	PRJEB788	206574	Terrabacteria group	Firmicutes	2.833	36.8	-	CBEA01	113	2358	2338	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138711	GCA_000436535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/535/GCA_000436535.1_MGS252	-	-
Alcanivorax sp. HI0013	1822221	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	6.60767	59.1	-	LWEM01	3199	5914	5037	5/2/16	5/2/16	Contig	Massachusetts Institute of Technology	SAMN04580760	GCA_001634705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/705/GCA_001634705.1_ASM163470v1	-	HI0013
Brevundimonas sp. UBA986	1946144	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.62632	68	-	DBBK01	281	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457235	GCA_002292165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/165/GCA_002292165.1_ASM229216v1	28894102	-
Stenotrophomonas sp. UBA878	1947561	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.7105	69.6	-	DBFO01	17	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455320	GCA_002294385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/385/GCA_002294385.1_ASM229438v1	28894102	-
Paenibacillus sp. UNC451MF	1449063	PRJNA234963	234963	Terrabacteria group	Firmicutes	7.48634	46	-	JMLS01	73	6715	6499	5/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743385	GCA_000686845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/845/GCA_000686845.1_ASM68684v1	-	UNC451MF
Ruminococcus sp. CAG:579	1262963	PRJEB942	206817	Terrabacteria group	Firmicutes	2.43519	49.9	-	CBCK01	135	2194	2156	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138622	GCA_000434695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/695/GCA_000434695.1_MGS579	-	-
Thioalkalivibrio sp. AKL11	545264	PRJNA178481	178481	Proteobacteria	Gammaproteobacteria	3.00244	64.9	-	ARJC01	20	2988	2837	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441004	GCA_000377845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/845/GCA_000377845.1_ASM37784v1	-	AKL11
Bacteroides sp. Ga6A1	1410607	PRJNA223498	223498	FCB group	Bacteroidetes/Chlorobi group	3.84869	45.1	-	JNLA01	79	3228	3045	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841198	GCA_000702285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/285/GCA_000702285.1_ASM70228v1	-	Ga6A1
Exiguobacterium sp. UBA1053	1946487	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.06944	47.2	-	DCDO01	20	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453254	GCA_002316465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/465/GCA_002316465.1_ASM231646v1	28894102	-
Shigella sp. FC2383	1890305	PRJNA338858	338858	Proteobacteria	Gammaproteobacteria	4.45932	50.8	-	MDJK01	619	4878	4200	8/26/16	8/26/16	Contig	Christian Medical College	SAMN05572631	GCA_001714965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/965/GCA_001714965.1_ASM171496v1	-	FC2383
Prochlorococcus sp. HOT208_60m_813B04	1961088	PRJNA375759	375759	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.21036	31.3	-	MWOU01	303	1309	1151	3/14/17	3/16/17	Scaffold	Massachusetts Institute of Technology	SAMN06345448	GCA_002025975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/975/GCA_002025975.1_ASM202597v1	-	HOT208_60m_813B04
Actinomyces sp. HMSC075B09	1739358	PRJNA300008	300008	Terrabacteria group	Actinobacteria	1.92281	56.2	-	LTEH01	15	1704	1630	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477663	GCA_001812395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/395/GCA_001812395.1_ASM181239v1	-	HMSC075B09
Desulfovibrio sp. UBA1335	1961405	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	3.05853	52.9	-	DBST01	107	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06453176	GCA_002306665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/665/GCA_002306665.1_ASM230666v1	28894102	-
Propionibacterium sp. 434-HC2	936048	PRJNA64687	64687	Terrabacteria group	Actinobacteria	2.56864	60	-	AFIL01	81	2603	2340	5/23/11	4/17/17	Contig	J. Craig Venter Institute	SAMN00255232	GCA_000214535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/535/GCA_000214535.2_ASM21453v1	-	434-HC2
Alistipes sp. 58_9_plus	1896970	PRJNA321218	321218	FCB group	Bacteroidetes/Chlorobi group	3.69317	58.3	-	MNQG01	302	3279	2383	12/23/16	12/23/16	Scaffold	None	SAMN05717212	GCA_001915305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/305/GCA_001915305.1_ASM191530v1	27819664	-
Campylobacter sp. 111	2039343	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.76035	30.3	-	NXBE01	53	1845	1694	9/27/17	9/27/17	Contig	University of California at Davis	SAMN05711876	GCA_002383915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/915/GCA_002383915.1_ASM238391v1	-	111
Neisseria sp. HMSC074B07	1715205	PRJNA296334	296334	Proteobacteria	Betaproteobacteria	2.66384	50.9	-	LTHZ01	124	2643	2446	10/17/16	8/4/17	Scaffold	The Genome Institute at Washington University	SAMN04477559	GCA_001810355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/355/GCA_001810355.1_ASM181035v1	-	HMSC074B07
Pseudonocardia sp. MH-G8	1854588	PRJNA392978	392978	Terrabacteria group	Actinobacteria	10.1794	72.6	-	NKYF01	80	9371	9037	8/22/17	8/24/17	Scaffold	"Institute of Microbiology, CAS"	SAMN07313211	GCA_002262885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/885/GCA_002262885.1_ASM226288v1	-	MH-G8
Sphingobacterium sp. UBA1498	1947481	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	5.16394	39.9	-	DCRG01	40	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455378	GCA_002325125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/125/GCA_002325125.1_ASM232512v1	28894102	-
uncultured Megasphaera sp.	165188	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.5613	52.6	-	FMFF01	55	2398	2347	8/16/16	8/16/16	Scaffold	SC	SAMEA3545320	GCA_900066485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/485/GCA_900066485.1_13470_2_73	-	-
Rothia sp. HMSC061E04	1739431	PRJNA300081	300081	Terrabacteria group	Actinobacteria	2.23734	59.3	-	LTWE01	26	1774	1674	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480354	GCA_001813685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/685/GCA_001813685.1_ASM181368v1	-	HMSC061E04
Rhodanobacter sp. FW510-R12	1525219	PRJNA255897	255897	Proteobacteria	Gammaproteobacteria	7.84214	67.5	-	LVJV01	2064	7526	6231	4/8/16	4/8/16	Contig	ENIGMA	SAMN02929143	GCA_001617425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/425/GCA_001617425.1_ASM161742v1	27048805	FW510-R12
Sphingobium sp. Z007	627495	PRJEB12244	390091	Proteobacteria	Alphaproteobacteria	4.93801	63.3	-	FBXK01	7	4762	4508	6/11/17	6/21/17	Contig	UNIVERSITY OF ZUERICH	SAMEA3718965	GCA_900013425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/425/GCA_900013425.1_ASM90001342v1	-	-
Halomonas sp. S2151	579478	PRJNA242743	242743	Proteobacteria	Gammaproteobacteria	5.21399	63.9	-	JXYB01	204	4625	4459	4/1/15	4/17/17	Contig	Technical University of Denmark	SAMN03323950	GCA_000967645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/645/GCA_000967645.1_S2151	25879706	S2151
Idiomarina sp. UBA4519	1946646	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.51418	45.8	-	DGML01	121	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450758	GCA_002388375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/375/GCA_002388375.1_ASM238837v1	28894102	-
Rhizobium sp. 42MFCr.1	1048680	PRJNA176445	176445	Proteobacteria	Alphaproteobacteria	6.20749	59.9	-	ARHV01	89	6114	5746	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440455	GCA_000377185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/185/GCA_000377185.1_ASM37718v1	-	42MFCr.1
Chryseobacterium sp. CF314	1144316	PRJNA83055	83055	FCB group	Bacteroidetes/Chlorobi group	4.48467	36.6	-	AKJY01	119	4089	3940	7/27/12	5/18/17	Contig	Oak Ridge National Lab	SAMN00839624	GCA_000282115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/115/GCA_000282115.1_Chryseobacterium.strCF314_v1.0	23045501	CF314
Methylophaga sp. UBA2687	1946877	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.1768	44.5	-	DELV01	50	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06453898	GCA_002354565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/565/GCA_002354565.1_ASM235456v1	28894102	-
Mesorhizobium sp. L103C565B0	1287094	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.14956	62.7	-	AYXB01	27	6010	5700	12/3/13	4/9/17	Contig	University of Southern California	SAMN02359653	GCA_000502295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/295/GCA_000502295.1_Mloti_L103C565B0	-	L103C565B0
Variovorax sp. CF079	1882774	PRJEB15723	347692	Proteobacteria	Betaproteobacteria	6.84701	67	-	FMZU01	71	6710	6443	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444679	GCA_900101545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/545/GCA_900101545.1_IMG-taxon_2687453692_annotated_assembly	-	CF079
Xanthomonas translucens	343	PRJNA302486	302486	Proteobacteria	Gammaproteobacteria	4.70949	68	-	LNVK01	151	4053	3707	12/8/15	4/4/17	Scaffold	Kansas State University	SAMN04279080	GCA_001461905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/461/905/GCA_001461905.1_ASM146190v1	-	CS2
Snodgrassella alvi	1196083	PRJNA339423	339423	Proteobacteria	Betaproteobacteria	2.42087	41.2	-	NAHL01	98	2176	2046	4/13/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603567	GCA_002088755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/755/GCA_002088755.1_ASM208875v1	-	N-S1
Microbacterium sp. Root166	1736478	PRJNA297942	297942	Terrabacteria group	Actinobacteria	3.46038	69.8	-	LMGL01	5	3188	3099	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155747	GCA_001427145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/145/GCA_001427145.1_Root166	26633631	Root166
Cupriavidus sp. JGI 0001016-D21	1268322	PRJNA183556	183556	Proteobacteria	Betaproteobacteria	1.52809	64.1	-	AXYL01	146	-	-	10/25/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02440733	GCA_000483305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/305/GCA_000483305.1_ASM48330v1	-	JGI 0001016-D21
Hyphomonas sp. UBA2691	1946621	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.14861	56.8	-	DELR01	129	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451362	GCA_002354525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/525/GCA_002354525.1_ASM235452v1	28894102	-
Mycobacterium fortuitum subsp. fortuitum DSM 46621 = ATCC 6841	1214102	PRJEB9497	285979	Terrabacteria group	Actinobacteria	6.31612	66.1	-	CVRX01	338	6115	5901	6/4/15	4/3/17	Scaffold	Centre for Proteomic and Genomic Research	SAMEA3444530	GCA_001050075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/075/GCA_001050075.1_Mycobacterium_fortuitum_ATCC_6841	-	ATCC 6841
Elizabethkingia meningoseptica	238	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.97048	36.4	-	DBEL01	20	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453942	GCA_002294465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/465/GCA_002294465.1_ASM229446v1	28894102	-
uncultured Blautia sp.	765821	PRJEB10915	297013	Terrabacteria group	Firmicutes	5.89846	45.8	-	FMFN01	1611	5523	5427	8/16/16	8/16/16	Scaffold	SC	SAMEA3545264	GCA_900066235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/235/GCA_900066235.1_13414_6_40	-	-
Massilia sp. UBA2709	1946838	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	4.49711	65.3	-	DEKZ01	479	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06454557	GCA_002354135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/135/GCA_002354135.1_ASM235413v1	28894102	-
Blastomonas sp. CCH2-A2	1768788	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	4.25207	64.3	-	LSKK01	300	4209	3967	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299487	GCA_001557415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/415/GCA_001557415.1_ASM155741v1	-	CCH2-A2
Raoultella ornithinolytica	54291	PRJNA385790	385790	Proteobacteria	Gammaproteobacteria	5.72444	55.3	-	NGAG01	53	5510	5285	8/23/17	8/25/17	Scaffold	Zhejiang University	SAMN06909735	GCA_002266585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/585/GCA_002266585.1_ASM226658v1	-	Ro25687
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.85599	58.9	-	LNWT01	60	4636	4502	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339857	GCA_001681605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/605/GCA_001681605.1_ASM168160v1	-	G759
Curtobacterium sp. MCBA15_004	1898733	PRJNA342146	342146	Terrabacteria group	Actinobacteria	3.64843	71.9	-	MJGK01	75	3378	3241	11/2/16	4/13/17	Scaffold	Massachusetts Institute of Technology	SAMN05736481	GCA_001865055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/055/GCA_001865055.1_ASM186505v1	-	MCBA15_004
Streptomyces rimosus subsp. rimosus	132474	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.73885	71.9	-	JOJJ01	176	8515	8068	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645530	GCA_000721665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/665/GCA_000721665.1_ASM72166v1	-	NRRL WC-3929
Butyrivibrio sp. AE3009	1280666	PRJNA185681	185681	Terrabacteria group	Firmicutes	4.2182	44.4	-	ATVS01	103	3574	3401	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02440909	GCA_000420845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/845/GCA_000420845.1_ASM42084v1	-	AE3009
Ensifer sp. LC54	1873715	PRJNA328912	328912	Proteobacteria	Alphaproteobacteria	7.0262	61.8	-	MBSR01	131	6689	6367	7/28/16	4/13/17	Contig	Monash University Malaysia	SAMN05384003	GCA_001695905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/905/GCA_001695905.1_LC54_v1	-	LC54
Leifsonia sp. SCN 70-46	1660107	PRJNA279279	279279	Terrabacteria group	Actinobacteria	3.12235	70.4	-	MEFY01	2	3142	3075	9/13/16	9/13/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03652501	GCA_001725325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/325/GCA_001725325.1_ASM172532v1	26031303	-
Sphingopyxis sp. HIX	1759074	PRJNA294421	294421	Proteobacteria	Alphaproteobacteria	4.86648	66.7	-	LNSB01	90	4556	4445	12/15/15	4/11/17	Contig	US EPA	SAMN04256143	GCA_001468285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/285/GCA_001468285.1_ASM146828v1	-	HIX
Salinivibrio sp. IB643	1909445	PRJNA368797	368797	Proteobacteria	Gammaproteobacteria	3.12315	49.4	-	MUFF01	91	2919	2732	2/14/17	2/22/17	Contig	Universidad de Sevilla	SAMN06272992	GCA_001996105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/105/GCA_001996105.1_ASM199610v1	-	IB643
Blautia hansenii DSM 20583	537007	PRJNA393727	393727	Terrabacteria group	Firmicutes	3.06595	39	chromosome:CP022413.2	-	1	3045	2893	7/20/17	8/30/17	Complete Genome	University of North Carolina at Chapel Hill	SAMN07340700	GCA_002222595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/222/595/GCA_002222595.2_ASM222259v2	-	DSM 20583
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.59278	35	-	LZHE01	177	2571	2395	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179601	GCA_001690575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/575/GCA_001690575.1_ASM169057v1	-	Bim3-2
Lysinibacillus sp. AC-3	1680467	PRJEB19720	377513	Terrabacteria group	Firmicutes	5.15917	36.6	-	FUYW01	57	5032	4761	3/8/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06295926	GCA_900167885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/885/GCA_900167885.1_IMG-taxon_2708742532_annotated_assembly	-	AC-3
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.09247	42.2	-	FTQG01	8	994	920	3/18/17	3/24/17	Contig	Functional Genomics Genter Zurich	SAMEA4555940	GCA_900149585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/585/GCA_900149585.1_22-22b	-	-
Vibrio metoecus	1481663	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.89655	46.9	-	LCUF01	75	3521	2064	10/22/15	10/22/15	Contig	University of Alberta	SAMN03610460	GCA_001402175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/175/GCA_001402175.1_ASM140217v1	26454015	Aug-59
Klebsiella michiganensis	1134687	PRJNA287090	287090	Proteobacteria	Gammaproteobacteria	5.92122	56	-	LFUC01	84	5709	5478	7/9/15	2/21/17	Contig	University of Malaya	SAMN03776119	GCA_001051455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/455/GCA_001051455.1_ASM105145v1	-	CH5
Achromobacter sp. 2789STDY5608617	1806477	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	6.36215	67.6	-	CYSV01	68	5847	5565	9/19/15	4/11/17	Scaffold	SC	SAMEA2247582	GCA_001298855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/855/GCA_001298855.1_11861_6_11	-	2789STDY5608617
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	6.79618	44.2	-	MPTL01	115	5966	5831	1/18/17	4/6/17	Contig	Cornell University	SAMN05772529	GCA_001954675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/675/GCA_001954675.1_ASM195467v1	-	FSL H7-0694
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.42917	51.1	-	MPNZ01	133	2463	2254	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016237	GCA_002019545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/545/GCA_002019545.1_ASM201954v1	-	-
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.83203	32.3	-	FQMR01	14	2860	2684	11/24/16	4/5/17	Contig	SC	SAMEA3449080	GCA_900126605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/605/GCA_900126605.1_17175_3_24	-	3688STDY6125072
Klebsiella quasipneumoniae subsp. quasipneumoniae	1667327	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.47238	58.1	-	NFAE01	63	5436	5174	6/9/17	6/12/17	Contig	JCVI	SAMN06812622	GCA_002184905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/905/GCA_002184905.1_ASM218490v1	-	ARLG-2711
Lactobacillus parabuchneri	152331	PRJNA357007	357007	Terrabacteria group	Firmicutes	2.7048	43.3	-	MSAY01	55	2639	2478	4/18/17	4/21/17	Scaffold	University of Bern	SAMN06130979	GCA_002095845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/845/GCA_002095845.1_ASM209584v1	28261177	FAM23164
Lactobacillus taiwanensis	508451	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.0917	34.1	-	NGOU01	208	2062	1816	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848410	GCA_002253525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/525/GCA_002253525.1_ASM225352v1	-	107q
Enterobacter kobei	208224	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.01727	54.9	-	LVUX01	102	4984	4686	4/25/16	4/5/17	Contig	JCVI	SAMN04572699	GCA_001631025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/025/GCA_001631025.1_ASM163102v1	-	GN06078
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.55685	66.9	-	LPGU01	57	6079	5810	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449520	GCA_001530945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/945/GCA_001530945.1_ASM153094v1	-	MSMB1913WGS
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.92036	67.5	-	LPFX01	106	7151	6781	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449497	GCA_001530395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/395/GCA_001530395.1_ASM153039v1	-	MSMB1514WGS
Syntrophomonas sp. UBA4903	1947624	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.47814	40.8	-	DHCL01	253	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451827	GCA_002398185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/185/GCA_002398185.1_ASM239818v1	28894102	-
Enterobacter cloacae complex 'Hoffmann cluster IV'	1812935	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.99205	55.7	-	JVWV01	257	4903	4611	7/10/15	4/20/17	Scaffold	University of Washington	SAMN03197221	GCA_001076175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/175/GCA_001076175.1_ASM107617v1	26230489	1254_ECLO
Oleiphilus sp. HI0130	1822269	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	5.1944	47.6	-	LWGI01	2064	4813	4079	5/2/16	5/2/16	Contig	Massachusetts Institute of Technology	SAMN04580808	GCA_001635385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/385/GCA_001635385.1_ASM163538v1	-	HI0130
Fibrobacter sp. UWB11	1896202	PRJEB18411	355825	FCB group	Fibrobacteres	3.76348	46.8	-	FSRT01	9	3066	2963	12/14/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05720758	GCA_900143015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/015/GCA_900143015.1_IMG-taxon_2703719254_annotated_assembly	-	UWB11
Xanthomonas axonopodis pv. manihotis str. IBSBF 2346	1185674	PRJNA163743	163743	Proteobacteria	Gammaproteobacteria	4.87459	65.2	-	AKDF01	122	4311	3991	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090310	GCA_000265945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/945/GCA_000265945.1_IBSBF2346	22699502	IBSBF 2346
Catabacter sp. UBA1045	1946235	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.29446	58.8	-	DCDW01	83	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452063	GCA_002316605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/605/GCA_002316605.1_ASM231660v1	28894102	-
Candidatus Microthrix sp. UBA2155	1946168	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.8961	64.2	-	DCWT01	78	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452946	GCA_002327605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/605/GCA_002327605.1_ASM232760v1	28894102	-
Candidatus Microthrix sp. UBA2131	1946167	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.27439	67.6	-	DCXR01	83	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455086	GCA_002329075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/075/GCA_002329075.1_ASM232907v1	28894102	-
Catabacter sp. UBA1038	1946234	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.99732	58.1	-	DCED01	228	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06457772	GCA_002316765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/765/GCA_002316765.1_ASM231676v1	28894102	-
Xanthomonas axonopodis pv. manihotis str. IBSBF 2538	1185675	PRJNA163745	163745	Proteobacteria	Gammaproteobacteria	4.83343	65.1	-	AKDG01	573	4525	3893	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090311	GCA_000265965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/965/GCA_000265965.1_IBSBF2538	22699502	IBSBF 2538
Fibrobacter sp. UWR3	1896217	PRJEB18416	355830	FCB group	Fibrobacteres	3.54674	53.8	-	FRCW01	20	2970	2851	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05720472	GCA_900143055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/055/GCA_900143055.1_IMG-taxon_2703719264_annotated_assembly	-	UWR3
Oleiphilus sp. HI0009	1822219	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	6.31684	43.8	-	LWEK01	2650	6108	5156	5/2/16	5/2/16	Contig	Massachusetts Institute of Technology	SAMN04580758	GCA_001635535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/535/GCA_001635535.1_ASM163553v1	-	HI0009
Syntrophomonas sp. UBA4894	1947623	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.38373	43.9	-	DHCU01	207	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455968	GCA_002398325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/325/GCA_002398325.1_ASM239832v1	28894102	-
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.5633	67.7	-	LPGD01	100	6907	6561	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449503	GCA_001530605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/605/GCA_001530605.1_ASM153060v1	-	MSMB1521WGS
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.65524	66.8	-	LPGV01	69	6092	5835	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449521	GCA_001530965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/965/GCA_001530965.1_ASM153096v1	-	MSMB1915WGS
Proteiniphilum sp. UBA4084	1947254	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.85584	46.8	-	DFYK01	138	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451302	GCA_002383605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/605/GCA_002383605.1_ASM238360v1	28894102	-
Enterobacter kobei	208224	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.9461	55	-	LVUM01	96	4816	4556	4/25/16	4/5/17	Contig	JCVI	SAMN04572688	GCA_001631525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/525/GCA_001631525.1_ASM163152v1	-	GN05680
Lactobacillus taiwanensis	508451	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.07098	34	-	NGOV01	127	2048	1824	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848409	GCA_002253535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/535/GCA_002253535.1_ASM225353v1	-	107d
Lactobacillus parabuchneri	152331	PRJNA357007	357007	Terrabacteria group	Firmicutes	2.61143	43.3	-	MSBF01	84	2514	2324	4/18/17	4/21/17	Scaffold	University of Bern	SAMN06130986	GCA_002095895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/895/GCA_002095895.1_ASM209589v1	28261177	FAM23279
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.29775	57.9	-	NFVH01	100	5314	5010	6/9/17	6/12/17	Contig	JCVI	SAMN05960968	GCA_002186485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/485/GCA_002186485.1_ASM218648v1	-	UNMC_7493
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.758	32.3	-	FQKJ01	14	2746	2580	11/23/16	4/6/17	Contig	SC	SAMEA3449084	GCA_900126625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/625/GCA_900126625.1_17175_3_28	-	3688STDY6125076
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.63492	50.5	-	MPNY01	76	2584	2483	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016236	GCA_002019575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/575/GCA_002019575.1_ASM201957v1	-	-
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	6.961	44.2	-	MPVM01	59	6203	6001	1/18/17	4/6/17	Contig	Cornell University	SAMN05929608	GCA_001955495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/495/GCA_001955495.1_ASM195549v1	-	FSL H3-0305
Achromobacter sp. 2789STDY5608636	1806480	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	4.53728	66.5	-	CYTV01	27	4271	4127	9/19/15	4/11/17	Scaffold	SC	SAMEA2247601	GCA_001298875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/875/GCA_001298875.1_11861_6_27	-	2789STDY5608636
Klebsiella michiganensis	1134687	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.22003	55.9	-	JWDQ01	219	6047	5809	7/10/15	2/21/17	Contig	University of Washington	SAMN03197044	GCA_001052035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/035/GCA_001052035.1_ASM105203v1	26230489	1081_KOXY
Vibrio metoecus	1481663	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.98791	46.9	-	LCUG01	88	3619	2912	10/22/15	10/22/15	Contig	University of Alberta	SAMN03610461	GCA_001402685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/685/GCA_001402685.1_ASM140268v1	26454015	2010V-1005
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.09801	42.2	-	FTQU01	1	991	916	3/18/17	3/24/17	Contig	Functional Genomics Genter Zurich	SAMEA4555934	GCA_900149595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/595/GCA_900149595.1_8-29b	-	-
Lysinibacillus sp. UBA1058	1946769	PRJNA348753	348753	Terrabacteria group	Firmicutes	4.32915	36.5	-	DCDJ01	194	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06450976	GCA_002316375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/375/GCA_002316375.1_ASM231637v1	28894102	-
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.19301	34.2	-	LZHF01	89	2004	1869	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179607	GCA_001690585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/585/GCA_001690585.1_ASM169058v1	-	Choc3-5
Acinetobacter baumannii	470	PRJNA380857	380857	Proteobacteria	Gammaproteobacteria	3.88441	39	chromosome:NZ_CP020591.1/CP020591.1	-	1	3703	3514	4/10/17	4/13/17	Complete Genome	Yonsei University College of medicine	SAMN06650242	GCA_002082745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/745/GCA_002082745.1_ASM208274v1	-	SSA6
Salinivibrio sp. MA607	1909457	PRJNA368801	368801	Proteobacteria	Gammaproteobacteria	3.35213	49.2	-	MUFJ01	68	3087	2942	2/14/17	2/22/17	Contig	Universidad de Sevilla	SAMN06272997	GCA_001996245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/245/GCA_001996245.1_ASM199624v1	-	MA607
Sphingopyxis sp. HXXIV	1759075	PRJNA294421	294421	Proteobacteria	Alphaproteobacteria	4.88511	66.7	-	LNSC01	141	4602	4454	12/15/15	4/11/17	Contig	US EPA	SAMN04256144	GCA_001468305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/305/GCA_001468305.1_ASM146830v1	-	HXXIV
Leifsonia sp. 71-9	1895934	PRJNA279279	279279	Terrabacteria group	Actinobacteria	4.47532	70.8	-	MKVJ01	24	4320	4163	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660604	GCA_001898805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/805/GCA_001898805.1_ASM189880v1	-	-
Ensifer sp. LCM 4579	1848292	PRJNA321041	321041	Proteobacteria	Alphaproteobacteria	6.13741	62.2	-	MDDV01	61	5789	5473	10/26/16	4/13/17	Contig	University of New Hampshire	SAMN04964169	GCA_001854885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/885/GCA_001854885.1_ASM185488v1	-	LCM 4579
Butyrivibrio sp. XPD2006	1280668	PRJNA185683	185683	Terrabacteria group	Firmicutes	3.88811	43.4	-	ATVT01	31	3486	3365	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02440910	GCA_000420865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/865/GCA_000420865.1_ASM42086v1	-	XPD2006
Streptomyces rimosus subsp. rimosus	132474	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.22255	72	-	LGCO01	288	8155	7739	9/4/15	3/12/17	Contig	University of Illinois	SAMN02900601	GCA_001279015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/015/GCA_001279015.1_ASM127901v1	-	NRRL WC-3909
Curtobacterium sp. MCBA15_008	1898736	PRJNA342146	342146	Terrabacteria group	Actinobacteria	4.02358	70.9	-	MJGN01	75	3769	3661	11/2/16	4/13/17	Scaffold	Massachusetts Institute of Technology	SAMN05736485	GCA_001865065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/065/GCA_001865065.1_ASM186506v1	-	MCBA15_008
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.65731	58.9	-	LNWU01	63	4425	4291	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339858	GCA_001681635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/635/GCA_001681635.1_ASM168163v1	-	G930
Raoultella ornithinolytica	54291	PRJNA385790	385790	Proteobacteria	Gammaproteobacteria	5.77062	55.3	-	NGAH01	57	5556	5313	8/23/17	8/25/17	Scaffold	Zhejiang University	SAMN06909734	GCA_002266645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/645/GCA_002266645.1_ASM226664v1	-	Ro25277
Blastomonas sp. CACIA14H2	1419876	PRJNA227307	227307	Proteobacteria	Alphaproteobacteria	4.06741	65.2	-	AYSC01	72	3867	3787	12/3/13	5/8/14	Contig	Universidade Federal do Para	SAMN02767960	GCA_000503195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/195/GCA_000503195.1_CACIA14H2Blastomonas	24435876	-
uncultured Blautia sp.	765821	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.36481	44.4	-	FMES01	29	3106	3047	8/16/16	8/16/16	Scaffold	SC	SAMEA3545287	GCA_900066325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/325/GCA_900066325.1_13414_6_63	-	-
Mycobacterium fortuitum subsp. acetamidolyticum	144550	PRJDB4227	295926	Terrabacteria group	Actinobacteria	7.10192	66	-	BCSZ01	83	6952	6675	2/10/16	4/5/17	Scaffold	"Microbiology, Graduate School of Medical Sciences, Kyushu University"	SAMD00041174	GCA_001570465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/465/GCA_001570465.1_ASM157046v1	27231354	JCM6368
Cupriavidus sp. UYMMa02A	1774745	PRJNA306671	306671	Proteobacteria	Betaproteobacteria	8.18412	64.1	-	LRMT01	307	7530	4030	9/14/16	9/14/16	Contig	IIBCE	SAMN04359667	GCA_001725945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/945/GCA_001725945.1_ASM172594v1	-	UYMMa02A
Microbacterium sp. Root180	1736483	PRJNA297942	297942	Terrabacteria group	Actinobacteria	3.34772	70	-	LMHS01	5	3135	3053	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155752	GCA_001428485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/485/GCA_001428485.1_Root180	26633631	Root180
Snodgrassella alvi	1196083	PRJNA339423	339423	Proteobacteria	Betaproteobacteria	2.41762	41.2	-	NAHP01	77	2157	2060	4/13/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603571	GCA_002088765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/765/GCA_002088765.1_ASM208876v1	-	N-S5
Xanthomonas translucens	343	PRJNA302486	302486	Proteobacteria	Gammaproteobacteria	4.61977	68	-	LNVL01	118	3977	3644	12/8/15	4/4/17	Scaffold	Kansas State University	SAMN04279081	GCA_001461915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/461/915/GCA_001461915.1_ASM146191v1	-	CS22
Variovorax sp. YR266	1884386	PRJEB16548	349843	Proteobacteria	Betaproteobacteria	7.46125	66.2	-	FNPM01	49	6957	6786	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05518854	GCA_900107295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/295/GCA_900107295.1_IMG-taxon_2687453812_annotated_assembly	-	YR266
Mesorhizobium sp. L2C054A000	1287100	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.39693	62.6	-	AYXA01	41	6316	5852	12/3/13	4/9/17	Contig	University of Southern California	SAMN02359654	GCA_000502315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/315/GCA_000502315.1_Mloti_L2C054A000	-	L2C054A000
Methylophaga sp. UBA2673	1946876	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.8954	44.1	-	DEMJ01	183	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06452583	GCA_002354845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/845/GCA_002354845.1_ASM235484v1	28894102	-
Chryseobacterium sp. FH1	1233951	PRJNA255519	255519	FCB group	Bacteroidetes/Chlorobi group	3.97588	36.9	-	JPLZ01	12	3654	3576	7/28/14	4/9/17	Contig	GCAT-SEEK	SAMN02924067	GCA_000735135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/135/GCA_000735135.1_ASM73513v1	-	FH1
Rhizobium sp. 2MFCol3.1	1246459	PRJNA178040	178040	Proteobacteria	Alphaproteobacteria	6.55041	61.1	-	ARIO01	44	6361	6120	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441683	GCA_000377565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/565/GCA_000377565.1_ASM37756v1	-	2MFCol3.1
Halomonas sp. PR-M31	1471202	PRJNA240143	240143	Proteobacteria	Gammaproteobacteria	3.80455	57.5	-	JIBT01	100	3595	3141	6/25/15	4/10/17	Contig	Korea Food Research Institute	SAMN02716187	GCA_001039575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/575/GCA_001039575.1_StaLen1.0	-	PR-M31
Sphingobium sp. YR768	1884365	PRJEB17015	351154	Proteobacteria	Alphaproteobacteria	5.73044	62.9	-	FOGE01	88	5343	5134	10/29/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05518866	GCA_900111125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/125/GCA_900111125.1_IMG-taxon_2687453792_annotated_assembly	-	YR768
Rhodanobacter sp. FW104-R5	1524468	PRJNA255806	255806	Proteobacteria	Gammaproteobacteria	7.7581	67.8	-	LVJQ01	3640	7388	5835	4/8/16	4/8/16	Contig	ENIGMA	SAMN02929136	GCA_001617445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/445/GCA_001617445.1_ASM161744v1	27048805	FW104-R5
Rothia sp. HMSC072B04	1739432	PRJNA300082	300082	Terrabacteria group	Actinobacteria	2.26945	59.5	-	LTWD01	36	1790	1698	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480359	GCA_001813725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/725/GCA_001813725.1_ASM181372v1	-	HMSC072B04
Sphingobacterium sp. UBA2096	1947488	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	5.65497	39.8	-	DCZA01	64	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454936	GCA_002331225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/225/GCA_002331225.1_ASM233122v1	28894102	-
Pseudonocardia sp. SCN 72-86	1660131	PRJNA279279	279279	Terrabacteria group	Actinobacteria	6.5546	72	-	MEFA01	396	6465	5879	9/13/16	9/13/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03652476	GCA_001724645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/645/GCA_001724645.1_ASM172464v1	26031303	-
Neisseria sp. HMSC075C12	1739282	PRJNA299932	299932	Proteobacteria	Betaproteobacteria	2.32856	49	-	LTGU01	76	2329	2156	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477595	GCA_001811065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/065/GCA_001811065.1_ASM181106v1	-	HMSC075C12
Campylobacter sp. 110	2039342	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.82036	31.1	-	NXBD01	60	1931	1764	9/27/17	9/27/17	Contig	University of California at Davis	SAMN05711875	GCA_002383965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/965/GCA_002383965.1_ASM238396v1	-	110
Alistipes sp. Zagget8	1930002	PRJNA357304	357304	FCB group	Bacteroidetes/Chlorobi group	3.51153	58.8	-	MSHJ01	20	-	-	1/10/17	1/10/17	Scaffold	University of Queensland	SAMN06140837	GCA_001941065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/065/GCA_001941065.1_ASM194106v1	-	-
Propionibacterium sp. CC003-HC2	1005703	PRJNA65579	65579	Terrabacteria group	Actinobacteria	2.55055	60	-	AFUK01	1	2563	2410	7/21/11	4/17/17	Contig	J. Craig Venter Institute	SAMN00621711	GCA_000221085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/085/GCA_000221085.2_ASM22108v1	-	CC003-HC2
Desulfovibrio sp. UBA4079	1961407	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	2.86262	67.9	-	DFYP01	208	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452288	GCA_002382645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/645/GCA_002382645.1_ASM238264v1	28894102	-
Actinomyces sp. HMSC075C01	1739387	PRJNA300037	300037	Terrabacteria group	Actinobacteria	3.27212	68.1	-	LTXO01	142	2779	2531	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480050	GCA_001812965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/965/GCA_001812965.1_ASM181296v1	-	HMSC075C01
Prochlorococcus sp. HOT208_60m_808M21	1961085	PRJNA375759	375759	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.48992	31.2	-	MWOX01	379	1658	1495	3/14/17	3/16/17	Scaffold	Massachusetts Institute of Technology	SAMN06345445	GCA_002026005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/005/GCA_002026005.1_ASM202600v1	-	HOT208_60m_808M21
Shigella sp. FC2531	1898681	PRJNA342385	342385	Proteobacteria	Gammaproteobacteria	4.54037	50.8	-	MINS01	637	5021	4337	9/17/16	9/17/16	Contig	Christian Medical College	SAMN05756147	GCA_001730385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/385/GCA_001730385.1_ASM173038v1	-	FC2531
Bacteroides sp. 3_1_13	457389	PRJNA38769	38769	FCB group	Bacteroidetes/Chlorobi group	6.30222	41.8	-	ACRR01	18	5065	4856	7/17/15	4/16/17	Scaffold	Broad Institute	SAMN00103198	GCA_001185845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/845/GCA_001185845.1_Bact_sp_3_1_13_V1	-	3_1_13
Thioalkalivibrio sp. AKL17	1158160	PRJNA178484	178484	Proteobacteria	Gammaproteobacteria	2.80322	67.6	-	ARJE01	18	2695	2581	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441339	GCA_000377885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/885/GCA_000377885.1_ASM37788v1	-	AKL17
Ruminococcus sp. CAG:563	1262961	PRJEB934	206784	Terrabacteria group	Firmicutes	2.29061	44.3	-	CBCR01	53	2087	2055	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138632	GCA_000434915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/915/GCA_000434915.1_MGS563	-	-
Paenibacillus sp. UNC217MF	1449062	PRJNA234965	234965	Terrabacteria group	Firmicutes	6.46828	46.6	-	JMLT01	46	5674	5448	5/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743367	GCA_000686865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/865/GCA_000686865.1_ASM68686v1	-	UNC217MF
Stenotrophomonas sp. UBA1577	1947546	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.5712	69.7	-	DCOF01	27	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455824	GCA_002322835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/835/GCA_002322835.1_ASM232283v1	28894102	-
Brevundimonas sp. UBA875	1946143	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.0875	67	-	DBFR01	222	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455321	GCA_002294365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/365/GCA_002294365.1_ASM229436v1	28894102	-
Alcanivorax sp. HI0035	1822229	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	6.69053	59.1	-	LWEU01	3128	6071	5101	5/2/16	5/2/16	Contig	Massachusetts Institute of Technology	SAMN04580768	GCA_001634855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/855/GCA_001634855.1_ASM163485v1	-	HI0035
Eubacterium sp. CAG:115	1262878	PRJEB694	202475	Terrabacteria group	Firmicutes	2.56005	53.2	-	CAYS01	183	2322	2289	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138718	GCA_000436675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/675/GCA_000436675.1_MGS115	-	-
Janthinobacterium sp. GW460P	1981503	PRJNA383021	383021	Proteobacteria	Betaproteobacteria	6.26511	62.9	-	NEGY01	106	5650	5402	5/11/17	5/22/17	Scaffold	Lawrence Berkeley National Laboratory	SAMN06758629	GCA_002127625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/625/GCA_002127625.1_ASM212762v1	-	GW460P
Caulobacter sp. 32-67-35	1970330	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	4.10012	66.6	-	NCEV01	163	3993	3704	8/16/17	8/16/17	Scaffold	None	SAMN06622337	GCA_002280875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/875/GCA_002280875.1_ASM228087v1	-	-
Psychrobacter sp. AC24	1055806	PRJNA228289	228289	Proteobacteria	Gammaproteobacteria	3.57452	43.4	-	AYXM01	88	3011	2833	12/20/13	4/17/17	Scaffold	University of Florence	SAMN02597459	GCA_000511635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/635/GCA_000511635.1_PsyAC24_v1.0	-	AC24
Acidovorax sp. SD340	1690268	PRJNA290831	290831	Proteobacteria	Betaproteobacteria	6.45439	64	-	LHUP01	315	6067	5724	10/22/15	4/11/17	Contig	Monash University Malaysia	SAMN03921825	GCA_001411535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/535/GCA_001411535.1_ASM141153v1	-	SD340
Marinobacter sp. X15-166B	1897620	PRJNA341480	341480	Proteobacteria	Gammaproteobacteria	3.49066	59.7	-	MEIY01	4	3308	3140	10/4/16	4/13/17	Scaffold	University of Hawaii at Manoa	SAMN05725121	GCA_001752365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/365/GCA_001752365.1_ASM175236v1	27932650	X15-166B
Erythrobacter sp. REDSEA-S28_B2	1811532	PRJNA289734	289734	Proteobacteria	Alphaproteobacteria	2.68782	63.7	-	LUNQ01	8	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534566	GCA_001626415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/415/GCA_001626415.1_ASM162641v1	27377622	-
Nocardioides sp. Root1257	1736439	PRJNA297942	297942	Terrabacteria group	Actinobacteria	5.49025	71.4	-	LMDV01	15	5199	5084	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04155708	GCA_001425175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/175/GCA_001425175.1_Root1257	26633631	Root1257
Methylobacterium sp. Leaf122	1736263	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	5.51669	68.1	-	LMNQ01	43	5218	4927	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151643	GCA_001423025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/025/GCA_001423025.1_Leaf122	26633631	Leaf122
Citrobacter sp. 50677481	1736699	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.04853	54.3	-	LNHZ01	81	5060	4842	12/9/15	4/11/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158308	GCA_001463265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/265/GCA_001463265.1_ASM146326v1	-	50677481
Treponema sp. UBA753	1947747	PRJNA348753	348753	Spirochaetes	Spirochaetia	2.31717	38.8	-	DBKJ01	139	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456438	GCA_002297325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/325/GCA_002297325.1_ASM229732v1	28894102	-
Novosphingobium sp. SCN 66-18	1660121	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	4.56737	65.9	-	MEGD01	81	4231	4061	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652506	GCA_001725355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/355/GCA_001725355.1_ASM172535v1	26031303	-
Lactobacillus sp. wkB10	1545701	PRJNA260938	260938	Terrabacteria group	Firmicutes	2.08464	35.4	-	JRJB01	32	1948	1888	9/30/14	4/9/17	Contig	Yale University	SAMN03067537	GCA_000760615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/615/GCA_000760615.1_ASM76061v1	25395644	wkB10
Enterococcus sp. HMSC065H12	1739425	PRJNA300075	300075	Terrabacteria group	Firmicutes	2.9527	37.8	-	LTWK01	248	3058	2862	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480348	GCA_001813575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/575/GCA_001813575.1_ASM181357v1	-	HMSC065H12
Prevotella sp. HUN102	1392486	PRJNA217188	217188	FCB group	Bacteroidetes/Chlorobi group	3.31815	45.3	-	JIAF01	4	2928	2760	4/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743910	GCA_000688375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/375/GCA_000688375.1_ASM68837v1	-	HUN102
Pantoea sp. AMG 501	2008894	PRJNA389525	389525	Proteobacteria	Gammaproteobacteria	5.10264	53.6	-	NIRH01	51	4869	4628	7/6/17	7/8/17	Contig	Embrapa	SAMN07201750	GCA_002215245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/245/GCA_002215245.1_ASM221524v1	-	AMG 501
Polaromonas sp. UBA4122	1947074	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	4.16932	59.3	-	DFWY01	172	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453216	GCA_002381615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/615/GCA_002381615.1_ASM238161v1	28894102	-
Serratia sp. 506_PEND	1572666	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.90254	58.7	-	JVEL01	646	5893	5434	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197699	GCA_001076875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/875/GCA_001076875.1_ASM107687v1	26230489	506_PEND
Mycobacterium sp. UNC280MFTsu5.1	1449048	PRJNA234892	234892	Terrabacteria group	Actinobacteria	5.69687	66.7	-	JQKU01	44	5497	5328	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02745509	GCA_000746215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/215/GCA_000746215.1_ASM74621v1	-	UNC280MFTsu5.1
Streptococcus sp. HMSC10A01	1581076	PRJNA269845	269845	Terrabacteria group	Firmicutes	2.17049	40.5	-	LTZV01	24	2088	1984	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03287006	GCA_001807785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/785/GCA_001807785.1_ASM180778v1	-	HMSC10A01
Bradyrhizobium sp. URHA0013	1380352	PRJNA213789	213789	Proteobacteria	Alphaproteobacteria	7.1931	63.8	-	JADK01	23	6856	6620	1/10/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02584987	GCA_000518345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/345/GCA_000518345.1_ASM51834v1	-	URHA0013
Arthrobacter sp. 35/47	269454	PRJNA230537	230537	Terrabacteria group	Actinobacteria	3.49397	65.2	-	AZHY01	53	3402	3038	1/14/14	4/17/17	Scaffold	University of Auckland	SAMN02429160	GCA_000520475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/475/GCA_000520475.1_AsbDRAFT	25649291	35/47
Corynebacterium sp. HMSC28B08	1581066	PRJNA269835	269835	Terrabacteria group	Actinobacteria	2.49753	58.5	-	LWOT01	66	2154	2016	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436213	GCA_001806865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/865/GCA_001806865.1_ASM180686v1	-	HMSC28B08
Staphylococcus sp. HMSC058D09	1715091	PRJNA296219	296219	Terrabacteria group	Firmicutes	2.18133	31.3	-	LTJS01	72	2123	2028	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477507	GCA_001809445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/445/GCA_001809445.1_ASM180944v1	-	HMSC058D09
Enterobacter sp. BWH 37	1329836	PRJNA201975	201975	Proteobacteria	Gammaproteobacteria	5.28367	54.6	-	JCLH01	8	5303	5008	2/3/14	4/9/17	Scaffold	Broad Institute	SAMN02138600	GCA_000534495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/495/GCA_000534495.1_Ente_cloa_complex_BWH_37_V1	-	BWH 37
Rhodococcus sp. R1101	1170698	PRJNA157995	157995	Terrabacteria group	Actinobacteria	4.65159	68	-	AJVB01	990	4606	3765	7/16/12	5/19/17	Contig	Walter Reed Army Institute of Research	SAMN02472115	GCA_000278445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/445/GCA_000278445.1_RhodoR1101_1.0	-	R1101
Acinetobacter baumannii	470	PRJNA305150	305150	Proteobacteria	Gammaproteobacteria	4.00472	39	chromosome:NZ_CP019034.1/CP019034.1	-	1	3838	3663	1/10/17	3/22/17	Complete Genome	University of Manitoba	SAMN04273154	GCA_001941765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/765/GCA_001941765.1_ASM194176v1	27939676	AB042
Sphingomonas sp. Leaf38	1736217	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	3.99496	65.8	-	LMLD01	15	3648	3488	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151597	GCA_001421825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/825/GCA_001421825.1_Leaf38	26633631	Leaf38
Clostridium sp. HMSC19B11	1581183	PRJNA269812	269812	Terrabacteria group	Firmicutes	4.13749	28.3	-	LWPF01	136	3878	3721	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436143	GCA_001806625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/625/GCA_001806625.1_ASM180662v1	-	HMSC19B11
Bacillus sp. NRRL B-14911	313627	PRJNA13545	13545	Terrabacteria group	Firmicutes	5.1165	45.7	-	AAOX01	75	5105	4889	3/1/06	6/15/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN00622969	GCA_000153365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/365/GCA_000153365.1_ASM15336v1	-	NRRL B-14911
Frankia sp. CcI49	1745382	PRJNA299692	299692	Terrabacteria group	Actinobacteria	9.75813	71.1	-	MOWP01	78	7866	7516	2/1/17	4/17/17	Contig	University of New Hampshire	SAMN04211910	GCA_001983215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/215/GCA_001983215.1_ASM198321v1	-	CcI49
Flavobacterium sp. TAB 87	1729581	PRJNA297146	297146	FCB group	Bacteroidetes/Chlorobi group	3.82741	34.4	-	LLWK01	38	3328	3215	1/22/16	4/11/17	Contig	University of Florence	SAMN04166283	GCA_001529295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/295/GCA_001529295.1_ASM152929v1	-	TAB 87
Klebsiella sp. NFIX15	1566178	PRJEB15944	348243	Proteobacteria	Gammaproteobacteria	5.28186	58.1	-	FMTJ01	23	5221	4970	10/14/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159472	GCA_900099865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/865/GCA_900099865.1_IMG-taxon_2600255254_annotated_assembly	-	NFIX15
Acinetobacter sp. ANC 3929	1217707	PRJNA183247	183247	Proteobacteria	Gammaproteobacteria	4.28774	40.4	-	APRH01	10	4141	3940	4/16/13	5/18/17	Scaffold	Broad Institute	SAMN01828138	GCA_000369405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/405/GCA_000369405.1_Acin_sp_ANC_3929_V1	-	ANC 3929
Paeniclostridium sordellii	1505	PRJEB8141	277665	Terrabacteria group	Firmicutes	3.54229	27.3	-	CDNN01	34	3468	3359	3/13/15	4/4/17	Contig	WTSI	SAMEA1572098	GCA_001372695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/695/GCA_001372695.1_JGS6956	-	JGS6956
Acinetobacter baumannii	470	PRJNA302452	302452	Proteobacteria	Gammaproteobacteria	4.00479	39	chromosome:NZ_CP018664.1/CP018664.1	-	1	3838	3664	12/12/16	3/21/17	Complete Genome	University of Manitoba	SAMN04273153	GCA_001593425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/425/GCA_001593425.2_ASM159342v2	25136007	ATCC 17978
Streptococcus thermophilus	1308	PRJNA327772	327772	Terrabacteria group	Firmicutes	1.86951	39	chromosome:NZ_CP016394.1/CP016394.1	-	1	1996	1684	10/28/16	4/11/17	Complete Genome	Inner Mongolia Agricultural University	SAMN05357478	GCA_001855705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/705/GCA_001855705.1_ASM185570v1	-	ND07
Pseudomonas chlororaphis	587753	PRJNA357079	357079	Proteobacteria	Gammaproteobacteria	6.75544	63.6	-	MSCT01	25	6103	5873	12/26/16	4/6/17	Contig	UNIVERSITY OF MALAGA	SAMN06132109	GCA_001921865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/921/865/GCA_001921865.1_ASM192186v1	-	PCL1601
Vibrio cyclitrophicus ZF205	1136172	PRJNA81889	81889	Proteobacteria	Gammaproteobacteria	4.89267	43.6	-	AIDO02	58	4298	4146	3/26/12	4/5/17	Scaffold	Massachusetts Institute of Technology	SAMN02470461	GCA_000256405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/405/GCA_000256405.2_ASM25640v2	22491847	ZF205
Elizabethkingia anophelis NUH4	1338015	PRJNA205481	205481	FCB group	Bacteroidetes/Chlorobi group	4.23949	35.6	-	ASYI01	50	3932	3815	11/7/13	4/2/17	Contig	SCELSE	SAMN02470992	GCA_000496015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/015/GCA_000496015.1_NUH4	24012265	NUH4
Salinispora pacifica CNT603	1136424	PRJNA169844	169844	Terrabacteria group	Actinobacteria	5.39554	69.9	-	AZVW01	77	5016	4673	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597227	GCA_000514415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/415/GCA_000514415.1_ASM51441v1	-	CNT603
Leptospira kirschneri serovar Grippotyphosa	38345	PRJNA374548	374548	Spirochaetes	Spirochaetia	4.3367	35.9	-	MVIS01	89	3915	3561	3/3/17	4/10/17	Contig	School of Veterinary Medicine and Animal Science / University of Sao Paulo	SAMN06328788	GCA_002018145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/145/GCA_002018145.1_ASM201814v1	-	UCR5RB1
Piscirickettsia salmonis EM-90	1435375	PRJNA231170	231170	Proteobacteria	Gammaproteobacteria	3.03544	40	-	JRHP01	534	3181	2761	9/26/14	4/2/17	Contig	Fraunhofer Chile Research Center for Systems Biotechnology Bio-Computing Division	SAMN03068711	GCA_000758485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/485/GCA_000758485.1_ASM75848v1	-	EM-90
Rhodococcus fascians	1828	PRJNA252927	252927	Terrabacteria group	Actinobacteria	5.90517	64.3	-	JOKB01	67	5574	5354	9/26/14	4/2/17	Scaffold	Oregon State University	SAMN02864791	GCA_000759005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/005/GCA_000759005.1_R_fas_A22b	25237311	A22b
Campylobacter lanienae	75658	PRJNA340998	340998	Proteobacteria	delta/epsilon subdivisions	1.56828	34.6	-	MJJL01	21	1623	1551	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687018	GCA_002139315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/315/GCA_002139315.1_ASM213931v1	28854596	P0102
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28379	32.4	chromosome:AP017592.1	-	1	-	-	1/24/17	1/27/17	Chromosome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053853	GCA_002356895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/895/GCA_002356895.1_ASM235689v1	-	M00021
Vibrio campbellii	680	PRJNA257165	257165	Proteobacteria	Gammaproteobacteria	5.1786	45.5	-	JPTJ01	601	4905	4605	7/22/15	4/3/17	Contig	Naval Research Laboratory	SAMN02948018	GCA_001185515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/515/GCA_001185515.1_ASM118551v1	-	E1
Mycobacterium chelonae	1774	PRJNA347845	347845	Terrabacteria group	Actinobacteria	5.06274	64.1	-	MLIR01	22	5014	4872	10/26/16	4/5/17	Contig	University of Georgia	SAMN05897999	GCA_001853985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/985/GCA_001853985.1_ASM185398v1	-	15517
Geobacillus sp. 47C-IIb	1963026	PRJNA354604	354604	Terrabacteria group	Firmicutes	3.34749	49.6	-	NADS01	167	3420	3189	4/3/17	4/5/17	Scaffold	"Jet Propulsion Laboratory, California Institute of Technology"	SAMN06347031	GCA_002077775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/775/GCA_002077775.1_ASM207777v1	-	47C-IIb
Streptococcus sobrinus TCI-348	1074072	PRJNA71913	71913	Terrabacteria group	Firmicutes	2.0571	43.7	-	AGGV01	360	2030	1793	10/6/11	3/30/17	Contig	JCVI	SAMN02436463	GCA_000228185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/185/GCA_000228185.2_SMUT2-NEX_1-348	-	TCI-348
Enterococcus hirae 78-09-C1	1262668	PRJNA182157	182157	Terrabacteria group	Firmicutes	2.9288	36.7	-	LGUL01	62	2784	2582	6/30/17	7/3/17	Contig	University of Saskatchewan	SAMN03801244	GCA_002213325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/325/GCA_002213325.1_ASM221332v1	-	78-09-C1
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.7326	66.5	-	LOTY01	131	8117	7668	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449160	GCA_001522305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/305/GCA_001522305.1_ASM152230v1	-	INT3-BP97
Pantoea agglomerans	549	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.57787	55.2	-	DCNX01	70	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454227	GCA_002322165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/165/GCA_002322165.1_ASM232216v1	28894102	-
Mycobacterium africanum MAL010137	1354183	PRJNA211672	211672	Terrabacteria group	Actinobacteria	4.39072	65.6	-	JKZQ01	4	4244	4031	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02231139	GCA_000666845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/845/GCA_000666845.1_Myco_afri_MAL010137_V1	-	MAL010137
Gallibacterium anatis 4895	1396510	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.63882	39.8	-	JPJQ01	97	2558	2401	11/5/14	4/2/17	Contig	University of Copenhagen	SAMN02344103	GCA_000772445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/445/GCA_000772445.1_ASM77244v1	-	4895
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.01889	64.2	-	FVDK01	24	5058	4863	3/10/17	3/18/17	Contig	SC	SAMEA2071359	GCA_900131555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/555/GCA_900131555.1_10665_4_10	-	265
Aeromonas veronii	654	PRJNA296464	296464	Proteobacteria	Gammaproteobacteria	4.68095	58.6	-	LKKG01	59	4342	4120	11/19/15	4/4/17	Contig	Texas Tech University	SAMN04099667	GCA_001446855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/855/GCA_001446855.1_ASM144685v1	26824353	TTU2014-143AME
Leuconostoc pseudomesenteroides	33968	PRJNA352459	352459	Terrabacteria group	Firmicutes	2.00878	39.1	-	MPHN01	62	2089	1863	3/27/17	4/17/17	Scaffold	Norwegian University of Life Sciences	SAMN05981483	GCA_002072515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/515/GCA_002072515.1_ASM207251v1	28217118	LMGH61
Klebsiella aerogenes	548	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.19793	55.1	-	LESW01	3	5080	4823	6/19/15	4/6/17	Scaffold	Broad Institute	SAMN03280172	GCA_001030165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/165/GCA_001030165.1_Ente_aero_UCI90_V1	-	UCI90
Streptobacillus moniliformis	34105	PRJNA319313	319313	Fusobacteria	Fusobacteriia	1.56703	26.3	-	LWTJ01	152	1435	1322	6/4/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04892885	GCA_001657875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/875/GCA_001657875.1_ASM165787v1	-	VK105/14
Xanthomonas perforans	442694	PRJNA276599	276599	Proteobacteria	Gammaproteobacteria	5.21627	64.6	-	JZUX01	128	4742	4296	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03378971	GCA_001009665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/665/GCA_001009665.1_v1	26089818	Xp4B
Streptococcus pseudopneumoniae	257758	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.12324	39.6	-	JVRR01	145	2211	2017	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197355	GCA_001070715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/715/GCA_001070715.1_ASM107071v1	26230489	163_SPSE
Kingella kingae KK12	1305786	PRJEB1638	194481	Proteobacteria	Betaproteobacteria	1.99102	46.8	-	CBSF01	1	2016	1827	9/11/13	4/2/17	Scaffold	URMITE	SAMEA2272103	GCA_000470255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/255/GCA_000470255.1_KK12	-	KK12
Vibrio anguillarum	55601	PRJNA267180	267180	Proteobacteria	Gammaproteobacteria	4.44822	44.9547	chromosome I:CP011462.1; chromosome II:CP011463.1	-	2	3623	3435	2/7/17	2/7/17	Chromosome	University of Copenhagen	SAMN03178188	GCA_001989835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/835/GCA_001989835.1_ASM198983v1	-	HI610
Enterobacter hormaechei subsp. oharae	301102	PRJNA223617	223617	Proteobacteria	Gammaproteobacteria	4.64303	55.3	-	JTEP01	28	4612	4300	12/4/14	3/25/17	Contig	J. Craig Venter Institute	SAMN03160298	GCA_000794145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/145/GCA_000794145.1_gdodcwi08_v01	-	MRSN 11489
Haemophilus parainfluenzae	729	PRJNA350376	350376	Proteobacteria	Gammaproteobacteria	2.70842	39.5	-	MOTP01	413	-	-	11/3/16	11/3/16	Scaffold	University of Bern	SAMN05938620	GCA_001865335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/335/GCA_001865335.1_ASM186533v1	-	AE-2096513
Agrobacterium sp. 13-2099-1-2	1841651	PRJNA319063	319063	Proteobacteria	Alphaproteobacteria	5.65582	58.5	-	LXKL01	40	5402	5214	7/22/16	4/13/17	Scaffold	Oregon State University	SAMN04901292	GCA_001692275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/275/GCA_001692275.1_ASM169227v1	27547538	13-2099-1-2
Streptococcus parasanguinis	1318	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.27724	41.6	-	JVCZ01	41	2255	2140	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197737	GCA_001071295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/295/GCA_001071295.1_ASM107129v1	26230489	540.rep1_SPAR
Fusobacterium necrophorum subsp. funduliforme	143387	PRJNA315619	315619	Fusobacteria	Fusobacteriia	2.28568	35.1	-	LVEX01	71	2251	2146	3/25/16	4/5/17	Contig	Aarhus University	SAMN04570265	GCA_001597465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/465/GCA_001597465.1_ASM159746v1	-	F1267
Citrobacter freundii	546	PRJNA252011	252011	Proteobacteria	Gammaproteobacteria	5.33179	51.5	-	JRSZ01	174	5367	5083	10/26/15	4/4/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872770	GCA_001413095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/095/GCA_001413095.1_ASM141309v1	25501822	RU2 LB30
Leptospira santarosai str. CBC1531	1218594	PRJNA177149	177149	Spirochaetes	Spirochaetia	3.83505	41.8	-	APGN01	285	3847	3574	3/21/13	4/1/17	Contig	J. Craig Venter Institute	SAMN01919772	GCA_000348015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/015/GCA_000348015.1_gls454162v01	-	CBC1531
Pantoea ananatis	553	PRJNA393047	393047	Proteobacteria	Gammaproteobacteria	4.86928	53.3	-	NKXT01	23	4644	4382	7/24/17	7/28/17	Contig	Embrapa	SAMN07313992	GCA_002224035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/035/GCA_002224035.1_ASM222403v1	-	1.38
Streptococcus anginosus	1328	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.95763	38.9	-	JVCG01	64	1934	1800	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197756	GCA_001076575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/575/GCA_001076575.1_ASM107657v1	26230489	557_SANG
Riemerella anatipestifer	34085	PRJNA309006	309006	FCB group	Bacteroidetes/Chlorobi group	2.20403	35	-	LUDK01	52	2090	2019	6/20/16	4/5/17	Contig	Sichuan Agricultural University	SAMN04419312	GCA_001670785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/670/785/GCA_001670785.1_RCAD0183	-	RCAD0183
Acinetobacter pittii	48296	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	4.21325	38.5	-	BBTZ01	116	4078	3865	2/20/15	4/3/17	Contig	National Institute of Technology and Evaluation	SAMD00020351	GCA_000949775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/775/GCA_000949775.1_ASM94977v1	-	NBRC 110507
Xanthomonas euvesicatoria	456327	PRJNA267090	267090	Proteobacteria	Gammaproteobacteria	5.11029	64.7	-	JTEK01	407	4732	4119	7/21/16	4/5/17	Contig	Institut de Recherche pour le Developpement	SAMN03177543	GCA_001691385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/385/GCA_001691385.1_XEU_LMG918_E1.0	-	LMG 918
Pseudomonas amygdali pv. tabaci	322	PRJNA269236	269236	Proteobacteria	Gammaproteobacteria	6.2325	58	-	JWJF01	106	5982	5326	2/25/15	4/3/17	Contig	"Institute of Plant Protection, Chinese Academy of Agricultural Sciences"	SAMN03257517	GCA_000934645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/645/GCA_000934645.1_ASM93464v1	25858831	yuexi-1
Brucella sp. CMUL 010	1906855	PRJNA345551	345551	Proteobacteria	Alphaproteobacteria	3.2963	57.2	-	MKXI01	53	3379	3142	10/14/16	4/13/17	Contig	LAU	SAMN05869263	GCA_001766425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/425/GCA_001766425.1_ASM176642v1	-	CMUL 010
Enterobacter asburiae	61645	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.00402	55.5	-	JWFR01	356	5016	4690	7/10/15	4/3/17	Contig	University of Washington	SAMN03196991	GCA_001053615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/615/GCA_001053615.1_ASM105361v1	26230489	1027_ECLO
Lysinibacillus sphaericus	1421	PRJNA344509	344509	Terrabacteria group	Firmicutes	3.43658	39	chromosome:NZ_CP017560.1/CP017560.1	-	1	3322	3165	10/6/16	4/11/17	Complete Genome	Shanghai Jiao Tong University	SAMN05827443	GCA_001753205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/205/GCA_001753205.1_ASM175320v1	-	LMG 22257
Pediococcus acidilactici	1254	PRJNA344012	344012	Terrabacteria group	Firmicutes	1.87895	42.3	-	MOAB01	3	1876	756	11/7/16	11/7/16	Contig	Anhui University	SAMN05804765	GCA_001868705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/705/GCA_001868705.1_ASM186870v1	-	JKY18
Vibrio alginolyticus	663	PRJNA288141	288141	Proteobacteria	Gammaproteobacteria	5.31617	44.6	-	LFZC01	131	4980	4752	8/18/15	4/4/17	Contig	Health Canada	SAMN03799837	GCA_001270205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/205/GCA_001270205.1_ASM127020v1	-	RM-12-1
Pseudoalteromonas sp. S3431	579537	PRJNA242743	242743	Proteobacteria	Gammaproteobacteria	4.20465	38.9	-	JJNY01	165	3705	3548	5/12/14	4/17/17	Contig	Technical University of Denmark	SAMN02708826	GCA_000690035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/035/GCA_000690035.1_Pgalathea	-	S3431
Pseudomonas savastanoi pv. glycinea	318	PRJNA284855	284855	Proteobacteria	Gammaproteobacteria	6.05821	57.7	-	LGLP01	215	5575	5081	9/18/15	4/4/17	Scaffold	University of Toronto	SAMN03737225	GCA_001294195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/195/GCA_001294195.1_PgyKN44	-	KN44
Pseudomonas syringae pv. maculicola	59511	PRJNA285238	285238	Proteobacteria	Gammaproteobacteria	6.30459	58.4	-	LGLG01	461	6088	5676	9/18/15	4/4/17	Contig	University of Toronto	SAMN03837740	GCA_001293925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/925/GCA_001293925.1_PmaH7608	-	H7608
Achromobacter xylosoxidans	85698	PRJNA319130	319130	Proteobacteria	Betaproteobacteria	6.23424	67.8	-	LWPK01	183	5727	5528	6/2/16	4/5/17	Contig	University of Florida	SAMN04880503	GCA_001654705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/654/705/GCA_001654705.1_ASM165470v1	-	KCJK1737
Streptococcus oralis SK1074	1095738	PRJNA75133	75133	Terrabacteria group	Firmicutes	1.8539	41.3	-	AICT01	20	1806	1727	4/5/12	3/30/17	Contig	J. Craig Venter Institute	SAMN00761796	GCA_000257845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/845/GCA_000257845.1_ASM25784v1	-	SK1074
Streptomyces griseus subsp. rhodochrous	285575	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.84171	72.4	-	JNZU01	4281	-	-	7/2/14	7/2/14	Contig	University of Illinois	SAMN02645349	GCA_000717555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/555/GCA_000717555.2_ASM71755v2	-	NRRL B-2933
Acinetobacter nosocomialis	106654	PRJNA338179	338179	Proteobacteria	Gammaproteobacteria	3.83547	39.2	-	MDLG02	638	3863	3531	11/7/16	5/24/17	Contig	Universidade Estadual de Santa Cruz	SAMN05525710	GCA_001867335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/335/GCA_001867335.2_ASM186733v2	-	CAS04
Klebsiella variicola	244366	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.65478	57.1	-	JUSW01	173	5583	5350	7/10/15	2/21/17	Contig	University of Washington	SAMN03198000	GCA_001066315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/315/GCA_001066315.1_ASM106631v1	26230489	789_KVAR
Bacillus atrophaeus	1452	PRJNA299292	299292	Terrabacteria group	Firmicutes	4.15969	43.2	-	LSBB01	23	4190	3956	3/9/16	4/5/17	Scaffold	NCAUR-ARS-USDA	SAMN04450411	GCA_001584335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/335/GCA_001584335.1_ASM158433v1	-	NRRL NRS 213
Rhodococcus hoagii	43767	PRJNA316970	316970	Terrabacteria group	Actinobacteria	5.14206	68.9	-	LWTV01	40	4744	4643	4/17/17	6/6/17	Contig	The University of Edinburgh	SAMN04880532	GCA_002094405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/405/GCA_002094405.1_ASM209440v1	27638249	PAM2287
Acinetobacter radioresistens	40216	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.97735	41.8	-	DGIW01	41	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457685	GCA_002386545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/545/GCA_002386545.1_ASM238654v1	28894102	-
Staphylococcus capitis	29388	PRJNA317600	317600	Terrabacteria group	Firmicutes	2.41844	32.7	-	LWCQ01	31	2391	2197	5/24/16	4/5/17	Contig	UC Berkeley	SAMN04621681	GCA_001650475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/475/GCA_001650475.1_ASM165047v1	-	H36
Staphylococcus hominis	1290	PRJNA375758	375758	Terrabacteria group	Firmicutes	2.43209	34.5	-	NCXB01	837	2248	2146	8/29/17	8/30/17	Contig	SysMilk	SAMN06718498	GCA_002276845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/845/GCA_002276845.1_ASM227684v1	-	KR
Lactobacillus paracasei subsp. paracasei CNCM I-2877	1256195	PRJNA178422	178422	Terrabacteria group	Firmicutes	2.97057	46.1	-	ANLE01	481	3248	2676	6/11/13	4/10/17	Contig	Danone Research	SAMN02641492	GCA_000410095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/095/GCA_000410095.1_ASM41009v1	23894338	CNCM I-2877
Gardnerella vaginalis	2702	PRJNA272096	272096	Terrabacteria group	Actinobacteria	1.5079	42.5	-	LRPZ01	18	1251	1149	2/2/16	4/4/17	Scaffold	The Genome Institute at Washington University	SAMN03851014	GCA_001546445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/445/GCA_001546445.1_ASM154644v1	-	GED7275B
Rothia mucilaginosa	43675	PRJNA327106	327106	Terrabacteria group	Actinobacteria	2.29446	59.5	-	MKYA01	21	-	-	12/22/16	12/22/16	Scaffold	None	SAMN05509321	GCA_001914075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/075/GCA_001914075.1_ASM191407v1	-	-
Aggregatibacter actinomycetemcomitans serotype e str. SA3096	1440768	PRJNA232405	232405	Proteobacteria	Gammaproteobacteria	2.09398	44.8	-	AZTQ01	127	2103	1891	3/23/16	4/5/17	Contig	"Bumgarner laboratory, Department of Microbiology, University of Washington"	SAMN04573013	GCA_001596425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/425/GCA_001596425.1_SA3096v1.0	-	SA3096
Lactobacillus crispatus	47770	PRJNA312549	312549	Terrabacteria group	Firmicutes	1.95435	37	-	LYQZ01	68	2013	1810	7/14/17	7/17/17	Contig	University of Minnesota	SAMN04498981	GCA_002218735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/735/GCA_002218735.1_ASM221873v1	-	UMNLC9
Brachyspira hyodysenteriae	159	PRJNA272555	272555	Spirochaetes	Spirochaetia	3.05918	27	-	JXNN01	71	2702	2577	5/26/15	4/3/17	Scaffold	Murdoch University	SAMN03285456	GCA_001013205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/013/205/GCA_001013205.1_ASM101320v1	26098837	ST190
Mycobacterium kansasii	1768	PRJNA374853	374853	Terrabacteria group	Actinobacteria	6.68747	66	-	MWKY01	28	5954	5557	4/11/17	4/13/17	Scaffold	University of Lodz	SAMN06339043	GCA_002086895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/895/GCA_002086895.1_ASM208689v1	-	5MK
Pectobacterium carotovorum subsp. carotovorum	555	PRJNA269234	269234	Proteobacteria	Gammaproteobacteria	4.96558	51.9	-	JUJQ01	12	4484	4332	12/29/14	4/2/17	Contig	Beijing Academy of Agriculture and Forestry Sciences	SAMN03252618	GCA_000808475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/475/GCA_000808475.1_ASM80847v1	-	YC T39
Streptococcus equinus	1335	PRJEB16179	348940	Terrabacteria group	Firmicutes	2.04226	37.2	-	FNGX01	18	1982	1911	10/20/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216400	GCA_900103355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/355/GCA_900103355.1_IMG-taxon_2654588197_annotated_assembly	-	Sb09
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.8955	47.6	-	MEBW01	65	3681	3502	11/18/16	4/5/17	Contig	The University of Queensland	SAMN05200559	GCA_001882975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/975/GCA_001882975.1_ASM188297v1	-	AHL3
Escherichia albertii	208962	PRJDB3047	301492	Proteobacteria	Gammaproteobacteria	4.7152	49.6	-	BBVR01	144	4844	4416	11/6/15	2/25/17	Scaffold	University of Miyazaki	SAMD00026628	GCA_001514825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/825/GCA_001514825.1_ASM151482v1	26537224	CB10113
Lactobacillus johnsonii	33959	PRJNA384810	384810	Terrabacteria group	Firmicutes	1.96176	34.4	-	NGOH01	120	1864	1733	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848423	GCA_002253275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/275/GCA_002253275.1_ASM225327v1	-	117c
Rhodococcus erythropolis	1833	PRJNA386766	386766	Terrabacteria group	Actinobacteria	6.43666	62.4	-	NHBD01	45	6057	4939	7/26/17	7/26/17	Contig	Hasselt University	SAMN07125953	GCA_002233715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/715/GCA_002233715.1_ASM223371v1	-	AV96
Flavobacterium psychrophilum	96345	PRJNA302794	302794	FCB group	Bacteroidetes/Chlorobi group	2.94533	32.9	-	LNTP01	433	2562	2447	1/11/16	4/5/17	Contig	South Dakota State University	SAMN04283694	GCA_001510875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/875/GCA_001510875.1_ASM151087v1	-	11754
Campylobacter concisus	199	PRJNA273422	273422	Proteobacteria	delta/epsilon subdivisions	1.91593	37.5315	plasmid unnamed 1:CM007854.1; plasmid unnamed 2:CM007855.1	LVWL01	23	1959	1706	4/13/17	4/17/17	Contig	RMIT University	SAMN04589112	GCA_002092835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/835/GCA_002092835.1_ASM209283v1	-	RCH 26
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.64613	67.2	-	LOTW01	123	6965	6607	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449158	GCA_001522645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/645/GCA_001522645.1_ASM152264v1	-	INT1-BP274
Propionibacterium freudenreichii	1744	PRJEB6430	270194	Terrabacteria group	Actinobacteria	2.6444	67.2	-	CCYS01	46	2380	2246	12/11/14	4/4/17	Scaffold	INRA STLO	SAMEA2822391	GCA_900000105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/000/105/GCA_900000105.1_CIRM-BIA119	-	CIRM-BIA 119
Aeromonas hydrophila 259	1268079	PRJNA183201	183201	Proteobacteria	Gammaproteobacteria	4.70069	61.7	-	AOBP01	80	4351	4166	4/6/13	5/18/17	Contig	University of Malaya	SAMN02471868	GCA_000354695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/695/GCA_000354695.1_de_novo_assembly	-	259
Pseudomonas stutzeri MF28	1333856	PRJNA202932	202932	Proteobacteria	Gammaproteobacteria	4.94356	62.3	-	ATAR01	91	4541	4440	8/27/13	4/1/17	Contig	University of Illinois at Chicago	SAMN02471812	GCA_000455665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/665/GCA_000455665.1_ASM45566v1	24092793	MF28
Paenibacillus polymyxa	1406	PRJNA323402	323402	Terrabacteria group	Firmicutes	5.73014	45.2	-	LZEL01	105	5184	4922	6/14/16	4/5/17	Contig	CSIR- National Environmental Engineering Research Institute	SAMN05211005	GCA_001662815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/815/GCA_001662815.1_ASM166281v1	-	ND25
Bacillus coagulans	1398	PRJNA270593	270593	Terrabacteria group	Firmicutes	3.3136	46.5	-	LQYJ01	184	3268	3083	3/11/16	4/5/17	Scaffold	University of Groningen	SAMN03267276	GCA_001587275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/275/GCA_001587275.1_B4096	27174261	B4096
Vibrio sp. AND4	314289	PRJNA13564	13564	Proteobacteria	Gammaproteobacteria	4.2558	44.7	-	ABGR01	143	3930	3656	11/7/07	5/19/17	Contig	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436117	GCA_000171815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/815/GCA_000171815.1_ASM17181v1	20436956	AND4
Staphylococcus saprophyticus	29385	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.66804	33	-	LMYT01	31	2648	2476	9/28/16	4/5/17	Scaffold	Tufts University	SAMN04244235	GCA_001747155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/155/GCA_001747155.1_ASM174715v1	-	BWH3
Streptococcus sanguinis CC94A	1073373	PRJNA71581	71581	Terrabacteria group	Firmicutes	2.50704	42.9	-	AZJC01	7	2524	2362	12/10/13	4/2/17	Scaffold	Broad Institute	SAMN01162043	GCA_000507745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/507/745/GCA_000507745.1_Stre_sang_CC94A_V1	-	CC94A
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.22175	36.7	-	LPRP01	8	2330	2226	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305150	GCA_001560205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/205/GCA_001560205.1_GG12_C01_16	-	GG12-C01-16
Bacillus weihenstephanensis	86662	PRJEB14962	336312	Terrabacteria group	Firmicutes	5.78893	35.2	-	FLZU01	36	6049	5643	8/3/16	6/16/17	Scaffold	INRA-MIG	SAMEA4359022	GCA_900094345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/345/GCA_900094345.1_ASM90009434v1	-	INRA 5
Bifidobacterium breve MCC 1114	1365964	PRJNA215977	215977	Terrabacteria group	Actinobacteria	2.48728	59	-	AVQC01	33	2232	2018	8/11/15	4/3/17	Contig	"Food Science and Technology Institute, Morinaga Milk Industry Co., Ltd"	SAMN03978798	GCA_001263855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/855/GCA_001263855.1_ASM126385v1	26236711	MCC 1114
Flavobacterium psychrophilum	96345	PRJNA292683	292683	FCB group	Bacteroidetes/Chlorobi group	4.1428	39	chromosome:CP012388.1	-	1	3632	3440	8/23/16	8/23/16	Complete Genome	BioInformatics Center	SAMN03983344	GCA_001708385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/385/GCA_001708385.1_ASM170838v1	-	Z1
Moraxella catarrhalis	480	PRJNA297370	297370	Proteobacteria	Gammaproteobacteria	1.95593	41.5	-	LXHJ01	40	1851	1695	6/3/16	4/5/17	Contig	Drexel University College of Medicine	SAMN04122801	GCA_001656175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/175/GCA_001656175.1_ASM165617v1	26912404	N6
Lactobacillus salivarius	1624	PRJNA321782	321782	Terrabacteria group	Firmicutes	2.25711	32.8	-	LXZS01	101	2321	2148	9/12/17	9/14/17	Contig	Seoul National University	SAMN05003792	GCA_002289615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/615/GCA_002289615.1_ASM228961v1	-	KLA002
Klebsiella oxytoca 11492-1	1134455	PRJNA81141	81141	Proteobacteria	Gammaproteobacteria	6.1711	54.9	-	AIEM01	212	5999	5740	3/16/12	2/21/17	Contig	Institute for Genome Science	SAMN02471877	GCA_000252915.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/915/GCA_000252915.3_Ko11492-1_1.0	22582383	11492-1
Cronobacter sakazakii	28141	PRJNA251818	251818	Proteobacteria	Gammaproteobacteria	4.54336	56.9	-	JOLT01	120	4456	4186	10/9/15	4/4/17	Scaffold	"Nottingham Trent University, UK"	SAMN02840819	GCA_001309275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/275/GCA_001309275.1_ASM130927v1	26438044	730
Streptococcus thermophilus	1308	PRJNA326481	326481	Terrabacteria group	Firmicutes	1.79166	39	chromosome:NZ_CP016439.1/CP016439.1	-	1	1924	1641	7/15/16	4/11/17	Complete Genome	China Agricultural University	SAMN05281844	GCA_001685375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/375/GCA_001685375.1_ASM168537v1	-	CS8
Proteus mirabilis	584	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.0773	38.8	-	JTBA01	1	3824	3635	11/14/14	7/6/17	Contig	US Food and Drug Administration 	SAMN02934536	GCA_000783575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/575/GCA_000783575.1_ASM78357v1	-	FDAARGOS_81
Mycoplasma bovis	28903	PRJNA306895	306895	Terrabacteria group	Tenericutes	0.944815	29.3	-	LQDV01	71	814	733	1/4/17	4/6/17	Contig	"University of California, Davis"	SAMN04366517	GCA_001930255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/255/GCA_001930255.1_ASM193025v1	-	2389MB
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.55525	32.7	-	CUER01	97	2552	2422	3/31/15	3/26/17	Contig	SC	SAMEA1035054	GCA_001226285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/285/GCA_001226285.1_7067_4_80	-	JCSC_1435
Propionibacterium acnes HL067PA1	765110	PRJNA49255	49255	Terrabacteria group	Actinobacteria	2.52793	60.1	-	ADZT01	35	2555	2427	7/28/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189233	GCA_000144045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/045/GCA_000144045.1_ASM14404v1	-	HL067PA1
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.52187	67.3	-	LOXA01	91	5910	5641	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449251	GCA_001524225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/225/GCA_001524225.1_ASM152422v1	-	FL-7-3-30-S2-D0
Burkholderia sp. JPY251	667585	PRJNA169692	169692	Proteobacteria	Betaproteobacteria	8.60952	63.1	-	ARDA01	122	7934	7395	4/19/13	5/18/17	Scaffold	DOE Joint Genome Institute	SAMN02441720	GCA_000372985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/985/GCA_000372985.1_ASM37298v1	-	JPY251
Campylobacter coli JV20	864566	PRJNA50513	50513	Proteobacteria	delta/epsilon subdivisions	1.70506	31.6	-	AEER01	11	1737	1623	8/25/10	3/15/17	Scaffold	Baylor College of Medicine	SAMN00215925	GCA_000146835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/146/835/GCA_000146835.1_ASM14683v1	-	JV20
Lactobacillus brevis	1580	PRJNA308170	308170	Terrabacteria group	Firmicutes	2.59167	45.6	-	LQNG01	123	2701	2472	1/26/16	4/4/17	Contig	Helsinki University	SAMN04387838	GCA_001541605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/605/GCA_001541605.1_1153	27056237	D6
Mannheimia haemolytica D193	1329904	PRJNA200972	200972	Proteobacteria	Gammaproteobacteria	2.68053	41	-	ATSY01	50	2787	2605	8/2/13	4/1/17	Contig	National Animal Disease Center	SAMN02116545	GCA_000443205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/205/GCA_000443205.1_MhD193v2	24136851	D193
Helicobacter pylori	210	PRJNA245115	245115	Proteobacteria	delta/epsilon subdivisions	1.51056	39	chromosome:NZ_CP011485.1/CP011485.1	-	1	1498	1365	5/27/16	3/28/17	Complete Genome	Veterinary Medicine University of Vienna	SAMN02731780	GCA_001653435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/435/GCA_001653435.1_ASM165343v1	-	ausabrJ05
Serratia marcescens	615	PRJNA270035	270035	Proteobacteria	Gammaproteobacteria	5.50605	59.5	chromosome:NZ_CP010584.1/CP010584.1	-	1	5323	5110	1/4/17	3/28/17	Chromosome	"Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences"	SAMN03262644	GCA_001932655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/655/GCA_001932655.1_ASM193265v1	-	AS1
Bartonella henselae	38323	PRJNA295147	295147	Proteobacteria	Alphaproteobacteria	1.8642	38	-	LOAI01	67	1697	1487	1/4/17	4/10/17	Contig	Anses UMR BIPAR	SAMN04286635	GCA_001932245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/245/GCA_001932245.1_ASM193224v1	-	F1
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.16362	39.9	-	FPMA01	6	1057	961	5/10/17	5/24/17	Contig	WTSI	SAMEA1094344	GCA_900118925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/925/GCA_900118925.1_7067_6_63	-	10DC83
Leuconostoc mesenteroides subsp. cremoris	33965	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.63731	38	-	MPAQ01	118	1758	1421	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981467	GCA_002092085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/085/GCA_002092085.1_ASM209208v1	28217118	LMGCF05
Anaplasma phagocytophilum	948	PRJEB13033	321622	Proteobacteria	Alphaproteobacteria	1.56165	42	-	FLMB01	191	1301	1085	6/2/16	4/5/17	Contig	INRA-MIG	SAMEA4018763	GCA_900088625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/625/GCA_900088625.1_ANAPC3	-	C3
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.2341	41.4	-	JJQO01	374	3616	3361	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708937	GCA_000979205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/205/GCA_000979205.1_gtlEnvA5udCFS	25756680	1.H.A.2.7
Acinetobacter baumannii	470	PRJNA290306	290306	Proteobacteria	Gammaproteobacteria	3.84662	39	chromosome:NZ_CP014538.1/CP014538.1	-	1	3694	3503	2/25/16	3/19/17	Complete Genome	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN03890258	GCA_001573065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/065/GCA_001573065.1_ASM157306v1	-	XH860
Lactobacillus gasseri MV-22	559301	PRJNA31203	31203	Terrabacteria group	Firmicutes	1.93044	35	-	ABWH02	2	2028	1626	10/14/08	1/9/14	Scaffold	Broad Institute	SAMN02463684	GCA_000155935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/935/GCA_000155935.2_Lacto_gasseri_MV-22_V2	-	MV-22
Yersinia enterocolitica (type O:9) str. YE56/03	1262464	PRJEB663	194495	Proteobacteria	Gammaproteobacteria	4.5647	47	-	CAQE01	1	4261	4018	4/30/13	3/26/17	Scaffold	WTSI	SAMEA3146262	GCA_001050755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/755/GCA_001050755.1_ASM105075v1	-	YE56/03
Acinetobacter baumannii	470	PRJNA290306	290306	Proteobacteria	Gammaproteobacteria	3.87964	39	chromosome:NZ_CP014540.1/CP014540.1	-	1	3709	3503	2/25/16	3/19/17	Complete Genome	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN03890255	GCA_001573105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/105/GCA_001573105.1_ASM157310v1	-	XH857
Streptococcus gordonii	1302	PRJNA280688	280688	Terrabacteria group	Firmicutes	2.25506	40.5	-	LAWR01	53	2231	2130	3/11/16	4/5/17	Contig	University of Malaya	SAMN03480741	GCA_001589095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/589/095/GCA_001589095.1_ASM158909v1	-	SK184
[Haemophilus] ducreyi	730	PRJNA270894	270894	Proteobacteria	Gammaproteobacteria	1.76652	38.7	chromosome:CP011223.1	-	1	1743	1555	6/30/15	7/23/15	Chromosome	Indiana University School of Medicine	SAMN03271823	GCA_001043335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/335/GCA_001043335.1_ASM104333v1	-	GU2
Corynebacterium diphtheriae	1717	PRJNA277810	277810	Terrabacteria group	Actinobacteria	2.49219	53.5	-	JZUJ01	36	2392	2218	4/3/15	4/3/17	Contig	Pirogov Russian National Research Medical University	SAMN03396925	GCA_000968865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/865/GCA_000968865.1_ASM96886v1	-	17801
Salinivirga cyanobacteriivorans	1307839	PRJNA299794	299794	FCB group	Bacteroidetes/Chlorobi group	4.81239	39	chromosome:NZ_CP013118.1/CP013118.1	-	1	3898	3807	11/13/15	9/4/17	Complete Genome	Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures	SAMN04215233	GCA_001443605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/443/605/GCA_001443605.1_ASM144360v1	-	L21-Spi-D4
Bordetella bronchiseptica E013	1458266	PRJNA237091	237091	Proteobacteria	Betaproteobacteria	5.0991	68.3	-	JGWY01	119	4894	4654	5/12/14	4/2/17	Contig	JCVI	SAMN02614582	GCA_000689715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/715/GCA_000689715.1_gbb70v01	25908122	E013
Flavobacterium psychrophilum	96345	PRJNA293776	293776	FCB group	Bacteroidetes/Chlorobi group	4.14222	39	chromosome:CP012586.1	-	1	3634	3442	11/4/15	11/4/15	Complete Genome	BioInformatics Center	SAMN04009762	GCA_001431805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/805/GCA_001431805.1_ASM143180v1	-	Z2
Clostridium sporogenes	1509	PRJNA355889	355889	Terrabacteria group	Firmicutes	4.10989	27.8	-	MRAC01	42	3919	3668	2/28/17	2/28/17	Contig	Institute for Environmental Health	SAMN06094649	GCA_002008145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/008/145/GCA_002008145.1_ASM200814v1	-	ATCC 3584
Streptococcus anginosus	1328	PRJNA282763	282763	Terrabacteria group	Firmicutes	1.92451	39	chromosome:NZ_CP012805.1/CP012805.1	-	1	1953	1815	10/26/15	4/4/17	Complete Genome	University of Oklahoma Health Sciences Center	SAMN03577772	GCA_001412635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/635/GCA_001412635.1_ASM141263v1	26679576	J4211
Vibrio splendidus FF-6	617146	PRJNA167015	167015	Proteobacteria	Gammaproteobacteria	5.63987	44.1	-	AJZI02	340	5037	4807	6/25/12	4/5/17	Scaffold	Broad Institute	SAMN02470457	GCA_000272325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/325/GCA_000272325.2_ASM27232v2	22955834	FF-6
Acetobacter pasteurianus 3P3	940282	PRJEA61319	61319	Proteobacteria	Alphaproteobacteria	3.01419	52.3	-	CADQ01	101	2891	2734	1/10/12	3/30/17	Scaffold	Vital-IT - Swiss Institute of Bioinformatics	SAMEA2272779	GCA_000285315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/315/GCA_000285315.1_ASM28531v1	-	3P3
Lactobacillus rhamnosus	47715	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.82229	46.8	-	JUMO01	145	2801	2634	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03198164	GCA_001068215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/215/GCA_001068215.1_ASM106821v1	26230489	944_LRHA
Pasteurella multocida subsp. multocida str. Anand1_goat	1032869	PRJNA66363	66363	Proteobacteria	Gammaproteobacteria	2.28538	40.5	-	AFRS01	349	2218	1812	6/24/11	8/8/17	Contig	"Department of Veterinary Microbiology, College of Veterinary Science and Animal Husbandry, Anand Agricultural University, Anand, Gujarat, India"	SAMN02469636	GCA_000219335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/335/GCA_000219335.2_ASM21933v2	-	Anand1_goat
[Haemophilus] parasuis	738	PRJNA241369	241369	Proteobacteria	Gammaproteobacteria	2.48199	39.6	-	JHQI01	182	2418	2209	7/21/14	4/2/17	Contig	BRaDP1T Consortium	SAMN02689465	GCA_000731865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/865/GCA_000731865.1_ASM73186v1	-	F9
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12976	41.2	-	CVYZ01	76	2065	1891	6/24/15	3/26/17	Contig	SC	SAMEA1032759	GCA_001175185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/185/GCA_001175185.1_6903_2_10	-	EQUI0059
Micrococcus luteus	1270	PRJNA252773	252773	Terrabacteria group	Actinobacteria	3.86281	69.8	-	JOKP01	3169	2744	2085	7/28/14	12/23/15	Contig	SaurashtraUniversity	SAMN02862046	GCA_000735325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/325/GCA_000735325.1_ASM73532v1	26697318	SUBG006
Alteromonas macleodii	28108	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.32083	44.7	-	DCKZ01	76	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451696	GCA_002320795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/795/GCA_002320795.1_ASM232079v1	28894102	-
Bifidobacterium bifidum	1681	PRJNA263318	263318	Terrabacteria group	Actinobacteria	2.17299	62.7	-	JSDW01	17	1852	1672	6/5/15	4/3/17	Contig	University of Parma	SAMN03103719	GCA_001020405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/405/GCA_001020405.1_Bbif06v4	25523018	IPLA 20015
Yersinia frederiksenii	29484	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.9973	47.5	-	CTKH01	61	4513	4290	3/26/15	4/3/17	Scaffold	SC	SAMEA859956	GCA_001222845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/845/GCA_001222845.1_4840_8_10	-	112/02
Bacillus mycoides	1405	PRJNA274235	274235	Terrabacteria group	Firmicutes	6.0968	35.3	-	LABT01	54	6559	5983	7/1/15	8/28/17	Scaffold	TU Muenchen	SAMN03325948	GCA_001044935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/935/GCA_001044935.1_ASM104493v1	26555390	WSBC 10969
Comamonas testosteroni	285	PRJDB3356	295167	Proteobacteria	Betaproteobacteria	5.89032	61.3	-	BBQP01	97	5545	5318	9/8/15	4/4/17	Contig	National Institute of Advanced Industrial Science and Technology (AIST)	SAMD00023462	GCA_001294075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/075/GCA_001294075.1_ASM129407v1	26472850	KF712
Stenotrophomonas maltophilia RA8	1118157	PRJEA77887	77887	Proteobacteria	Gammaproteobacteria	4.85145	65.7	-	CALM01	1363	4643	4120	3/31/13	6/15/17	Contig	Karlsruhe Institue of Technology - Institue of functional Interfaces	SAMEA2272195	GCA_000355725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/725/GCA_000355725.1_ASM35572v1	-	RA8
Acinetobacter baumannii	470	PRJEB9721	290879	Proteobacteria	Gammaproteobacteria	3.81916	39	chromosome I:NZ_LN868200.1/LN868200.1	-	1	3695	3522	7/24/15	3/19/17	Complete Genome	CEBITEC	SAMEA3751109	GCA_001261895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/895/GCA_001261895.2_R2090	-	-
Bifidobacterium animalis subsp. animalis IM386	1402194	PRJEB4710	287890	Terrabacteria group	Actinobacteria	1.92569	60.5	-	CBUQ01	8	1620	1471	1/14/15	4/3/17	Contig	ERA7	SAMEA3158463	GCA_001039715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/715/GCA_001039715.1_BAN2	-	IM386
Chlamydia psittaci 02DC22	1112258	PRJNA77089	77089	PVC group	Chlamydiae	1.21979	39.2	-	ATKU01	43	1100	1014	6/25/13	4/1/17	Scaffold	University of Maryland School of Medicine	SAMN00860210	GCA_000415625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/625/GCA_000415625.1_ASM41562v1	-	02DC22
Berkelbacteria bacterium GW2011_GWE1_39_12	1618337	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.915059	39	chromosome:CP011213.1	-	1	1037	992	6/19/15	6/19/15	Complete Genome	"Banfield Lab, University of California, Berkeley"	SAMN03319457	GCA_001029735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/735/GCA_001029735.1_ASM102973v1	-	-
Neisseria gonorrhoeae PID1	528355	PRJNA32799	32799	Proteobacteria	Betaproteobacteria	2.16988	52.3	-	ABZM01	48	2399	2138	12/15/08	4/11/17	Scaffold	Broad Institute	SAMN02595244	GCA_000156895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/895/GCA_000156895.1_ASM15689v1	-	PID1
Streptococcus mutans TCI-151	1074127	PRJNA72005	72005	Terrabacteria group	Firmicutes	1.82047	37	-	AGKS01	121	1841	1745	10/6/11	3/22/17	Contig	JCVI	SAMN02436601	GCA_000229025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/025/GCA_000229025.2_SMUT4-NEX_50-151	-	TCI-151
Borrelia garinii IPT139	1408856	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.10744	28.2	-	AYBF01	255	1075	540	12/3/13	4/2/17	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378823	GCA_000501915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/915/GCA_000501915.1_BorGarIPT139	-	IPT139
Streptococcus dysgalactiae subsp. equisimilis	119602	PRJNA327242	327242	Terrabacteria group	Firmicutes	2.11709	39.5	-	MCRP01	64	2136	1938	8/13/16	4/5/17	Contig	The UT MD Anderson Cancer Center	SAMN05327343	GCA_001704455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/455/GCA_001704455.1_ASM170445v1	-	UT_4966_RC
Methanobrevibacter smithii TS96C	911135	PRJNA59687	59687	Euryarchaeota	Methanobacteria	1.81824	31.2	-	AEMD01	108	1762	1641	2/17/11	3/30/17	Contig	Washington University in St.Louis	SAMN02436672	GCA_000190175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/175/GCA_000190175.2_ASM19017v2	21317366	TS96C
Microcystis aeruginosa NIES-88	449441	PRJNA265027	265027	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.26322	43	-	JXYX01	29	5307	4620	3/1/16	4/5/17	Scaffold	University of Helsinki	SAMN03329508	GCA_001578075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/075/GCA_001578075.1_ASM157807v1	26846478	NIES-88
Bradyrhizobium japonicum	375	PRJNA239701	239701	Proteobacteria	Alphaproteobacteria	9.1385	63.7	-	JGCL01	87	8664	8320	6/23/15	4/3/17	Scaffold	University of Manitoba	SAMN02666820	GCA_001038185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/185/GCA_001038185.1_ASM103818v1	26227594	FN1
Enterococcus faecalis TX0031	749499	PRJNA47153	47153	Terrabacteria group	Firmicutes	2.8204	37.5	-	AEBF01	32	2808	2704	8/27/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189106	GCA_000147275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/275/GCA_000147275.1_ASM14727v1	-	TX0031
Brucella suis 63/261	1160228	PRJNA173582	173582	Proteobacteria	Alphaproteobacteria	3.32147	57.2	-	AQKZ01	7	3381	3155	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN00811232	GCA_000371125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/125/GCA_000371125.1_Bruc_suis_63_261_V1	-	63/261
Clavibacter michiganensis subsp. michiganensis	33013	PRJNA331200	331200	Terrabacteria group	Actinobacteria	3.3878	72.3	-	MDHI01	32	3208	2856	5/19/17	8/4/17	Contig	University of California	SAMN05439587	GCA_002151305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/305/GCA_002151305.1_ASM215130v1	-	CASJ008
Rhizobium leguminosarum bv. trifolii CC283b	754520	PRJNA65503	65503	Proteobacteria	Alphaproteobacteria	7.92346	60.5	-	AZXS01	11	7773	7206	1/3/14	4/10/17	Scaffold	JGI	SAMN02597275	GCA_000515375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/375/GCA_000515375.1_ASM51537v1	-	CC283b
Treponema pallidum subsp. pallidum	161	PRJNA322283	322283	Spirochaetes	Spirochaetia	1.13917	52.8	chromosome:NZ_CP016045.1/CP016045.1	-	1	1066	1002	8/25/16	4/5/17	Chromosome	"National Institute of Health, Portugal"	SAMN05150260	GCA_001712895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/895/GCA_001712895.1_ASM171289v1	-	PT_SIF0697
Borrelia burgdorferi IPT26	1408862	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.18509	28.3	-	AYBL01	120	1226	713	12/3/13	4/2/17	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378829	GCA_000501335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/335/GCA_000501335.1_BorBurgIPT26	-	IPT26
Burkholderia multivorans	87883	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.30776	67.4	-	LPDN01	56	5930	5650	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449432	GCA_001529795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/795/GCA_001529795.1_ASM152979v1	-	MSMB1128WGS
Streptococcus thermophilus	1308	PRJNA274301	274301	Terrabacteria group	Firmicutes	1.85043	39	chromosome:NZ_CP010999.1/CP010999.1	-	1	1977	1677	5/15/15	4/11/17	Complete Genome	Inner Mongolia Mengniu Dairy (Group) Co. Ltd.	SAMN03325854	GCA_001008015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/015/GCA_001008015.1_ASM100801v1	26337884	MN-BM-A02
Burkholderia thailandensis MSMB43	441157	PRJNA19501	19501	Proteobacteria	Betaproteobacteria	6.95617	67	-	ABBM01	1230	7079	5778	6/6/07	5/18/17	Contig	NMRC	SAMN02470669	GCA_000170495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/495/GCA_000170495.1_ASM17049v1	-	MSMB43
Aliivibrio fischeri	668	PRJNA318805	318805	Proteobacteria	Gammaproteobacteria	4.15902	38.3	-	MAJQ01	128	3888	3747	7/21/16	4/5/17	Scaffold	Massachusetts Institute of Technology	SAMN04867937	GCA_001690975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/975/GCA_001690975.1_ASM169097v1	-	5F23
Porphyromonas gingivalis	837	PRJDB4201	295054	FCB group	Bacteroidetes/Chlorobi group	2.22999	48.5	-	BCBV01	112	1988	1799	9/17/15	4/4/17	Scaffold	"Lab. of Plant Genomics and Genetics, Department of Plant Genome Research, Kazusa DNA Research Institute"	SAMD00040429	GCA_001297745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/745/GCA_001297745.1_ASM129774v1	26543123	Ando
Helicobacter pylori J99	85963	PRJNA281410	281410	Proteobacteria	delta/epsilon subdivisions	1.69837	39	chromosome:NZ_CP011330.1/CP011330.1	-	1	1645	1488	4/30/15	3/26/17	Complete Genome	Icahn School of Medicine at Mount Sinai	SAMN03487572	GCA_000982695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/695/GCA_000982695.1_ASM98269v1	26074426	J99
Lactobacillus fermentum	1613	PRJNA296497	296497	Terrabacteria group	Firmicutes	2.01183	51.9	-	LJWZ01	108	2098	1496	9/23/15	4/4/17	Contig	Kingston University	SAMN04100088	GCA_001297905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/905/GCA_001297905.1_ASM129790v1	26659681	UCO-979C
Bifidobacterium adolescentis	1680	PRJNA300965	300965	Terrabacteria group	Actinobacteria	2.20303	59.1	-	LNKI01	12	1889	1736	4/24/17	4/26/17	Contig	University of Parma	SAMN04231315	GCA_002108095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/095/GCA_002108095.1_BadoAD467v1	27035119	AL46-7
Vibrio harveyi	669	PRJNA257174	257174	Proteobacteria	Gammaproteobacteria	5.85273	44.9	-	JPTQ01	765	5510	5211	7/22/15	4/3/17	Contig	Naval Research Laboratory	SAMN02948027	GCA_001185645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/645/GCA_001185645.1_ASM118564v1	-	CAIM464
Lactobacillus helveticus	1587	PRJNA310689	310689	Terrabacteria group	Firmicutes	2.10023	36.5	-	LSVJ01	312	2210	1751	2/25/16	4/5/17	Contig	University of Parma	SAMN04453675	GCA_001572815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/815/GCA_001572815.1_ASM157281v1	-	Lh 23
Salinispora arenicola DSM 45545	999546	PRJNA165283	165283	Terrabacteria group	Actinobacteria	5.86741	69.5	-	ARBB01	1	5272	5001	4/22/13	4/1/17	Scaffold	DOE Joint Genome Institute	SAMN02256404	GCA_000384275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/275/GCA_000384275.1_ASM38427v1	-	CNS-991
Lactobacillus casei UW4	1051661	PRJNA68477	68477	Terrabacteria group	Firmicutes	2.7583	46.4	-	AFYS01	122	3001	2567	11/2/12	3/30/17	Contig	University of Wisconsin-Madison and Utah State University	SAMN02472004	GCA_000309745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/745/GCA_000309745.1_ASM30974v1	23035691	UW4
Coxiella burnetii	777	PRJNA394747	394747	Proteobacteria	Gammaproteobacteria	2.00623	42.5	-	NOLS01	34	2192	1994	8/11/17	8/16/17	Scaffold	National Institutes of Health	SAMN07349490	GCA_002249845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/845/GCA_002249845.1_ASM224984v1	-	Ohio 314 RSA338
Candidatus Baumannia cicadellinicola	186490	PRJNA255334	255334	Proteobacteria	Gammaproteobacteria	0.759425	39	chromosome:NZ_CP008985.1/CP008985.1	-	1	732	669	9/12/14	4/9/17	Complete Genome	University of Texas at Austin	SAMN03290991	GCA_000754265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/265/GCA_000754265.1_ASM75426v1	25271287	BGSS
Vibrio parahaemolyticus EKP-008	1238214	PRJNA176649	176649	Proteobacteria	Gammaproteobacteria	5.31422	45.1	-	AZMN01	72	5213	4805	12/18/13	3/18/17	Scaffold	IGS	SAMN01924275	GCA_000510585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/510/585/GCA_000510585.2_vpEKP008	-	EKP-008
Aeromonas salmonicida subsp. salmonicida	29491	PRJNA310296	310296	Proteobacteria	Gammaproteobacteria	4.63906	58.6	-	LSGV01	110	4338	4010	5/13/16	4/5/17	Contig	Universidad Mayor	SAMN04449844	GCA_001643275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/275/GCA_001643275.1_ASM164327v1	-	J223
Streptococcus mitis	28037	PRJNA242573	242573	Terrabacteria group	Firmicutes	2.13699	39.9	-	JPFV01	15	2105	1841	7/7/14	4/2/17	Contig	Aarhus University	SAMN02836937	GCA_000722685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/685/GCA_000722685.1_ASM72268v1	25053789	SK667
Oenococcus oeni	1247	PRJNA253810	253810	Terrabacteria group	Firmicutes	1.86282	38	-	JPEK01	23	1953	1770	7/11/14	3/24/17	Contig	University of Foggia	SAMN02893932	GCA_000725025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/025/GCA_000725025.1_ASM72502v1	25342687	OM22
Acinetobacter baumannii	470	PRJNA256157	256157	Proteobacteria	Gammaproteobacteria	4.33579	39	chromosome:NZ_CP009257.1/CP009257.1	-	1	4296	3953	8/29/14	3/16/17	Complete Genome	University of Manitoba	SAMN02940899	GCA_000746645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/645/GCA_000746645.1_ASM74664v1	25323713	AB030
Campylobacter fetus subsp. testudinum	1507806	PRJNA285172	285172	Proteobacteria	delta/epsilon subdivisions	1.80955	33	-	LFLJ01	51	1831	1754	8/5/16	4/5/17	Contig	Utrecht University	SAMN03741805	GCA_001699205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/205/GCA_001699205.1_ASM169920v1	27333878	CFT12S00416-3
Helicobacter pylori	210	PRJNA245284	245284	Proteobacteria	delta/epsilon subdivisions	1.60423	39	chromosome:NZ_CP007604.1/CP007604.1	-	1	1571	1435	5/8/14	3/24/17	Complete Genome	Penn State University	SAMN02736809	GCA_000685665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/665/GCA_000685665.1_ASM68566v1	24924186	BM013A
Leptospira borgpetersenii serovar Hardjo-bovis str. Sponselee	1303729	PRJNA191805	191805	Spirochaetes	Spirochaetia	3.75564	40.2	-	AQCK01	187	3740	3150	4/6/13	4/1/17	Contig	J. Craig Venter Institute	SAMN01994529	GCA_000355135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/135/GCA_000355135.1_CA_glsol077	-	Sponselee
Lactobacillus delbrueckii subsp. lactis	29397	PRJEB5825	240977	Terrabacteria group	Firmicutes	2.08562	49.5	-	CCDU01	75	2064	1703	6/11/14	4/2/17	Scaffold	INRA-MIG	SAMEA2547924	GCA_000751275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/275/GCA_000751275.1_LBCNRZ700_V1	-	-
Yersinia pseudotuberculosis B-7195	1324587	PRJEB1801	200902	Proteobacteria	Gammaproteobacteria	4.60847	47.5	-	CBKR01	261	4254	4038	5/22/13	4/1/17	Contig	UPSUD	SAMEA2272156	GCA_000403745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/745/GCA_000403745.1_B-7195	23868131	B-7195
Brucella abortus	235	PRJNA400357	400357	Proteobacteria	Alphaproteobacteria	3.56439	56.4775	chromosome 1:CP023211.1; chromosome 2:CP023212.1	-	2	3316	2901	9/12/17	9/12/17	Chromosome	IZSM-Portici	SAMN07572666	GCA_002290745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/745/GCA_002290745.1_ASM229074v1	-	28375
Helicobacter pylori	210	PRJNA245314	245314	Proteobacteria	delta/epsilon subdivisions	1.60421	39	chromosome:NZ_CP007606.1/CP007606.1	-	1	1573	1435	5/8/14	3/24/17	Complete Genome	Penn State University	SAMN02736816	GCA_000685745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/745/GCA_000685745.1_ASM68574v1	24924186	BM013B
Streptococcus salivarius	1304	PRJNA320256	320256	Terrabacteria group	Firmicutes	2.17717	39.8	-	LXMC01	4	2039	1910	6/7/16	4/5/17	Contig	State University of Campinas	SAMN04931542	GCA_001659645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/645/GCA_001659645.1_ASM165964v1	-	20-12 S2
Shigella boydii	621	PRJNA288173	288173	Proteobacteria	Gammaproteobacteria	4.34945	50.8	-	LPTK01	431	5015	4153	12/15/16	2/26/17	Contig	"University of Maryland, School of Medicine"	SAMN04001696	GCA_001906025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/025/GCA_001906025.1_ASM190602v1	-	602068
Clostridioides difficile 002-P50-2011	997827	PRJNA64719	64719	Terrabacteria group	Firmicutes	4.10306	28.3	-	AGAA01	79	3774	3671	11/18/11	3/15/17	Scaffold	Washington University Genome Center	SAMN02299444	GCA_000235825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/825/GCA_000235825.1_ASM23582v1	-	002-P50-2011
Helicobacter pylori oki128	1382922	PRJNA215150	215150	Proteobacteria	delta/epsilon subdivisions	1.55383	39	chromosome:NZ_CP006822.1/CP006822.1	-	1	1540	1357	3/25/14	3/24/17	Complete Genome	Okinawa Institute of Advanced Sciences	SAMN03081490	GCA_000600125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/125/GCA_000600125.1_ASM60012v1	24744331	oki128
Candidatus Pelagibacter ubique	198252	PRJEB9287	287342	Proteobacteria	Alphaproteobacteria	0.977727	29.2	-	CVSU01	127	1055	958	6/17/15	4/10/17	Contig	UNIVERSITY OF CALIFORNIA - SAN DIEGO	SAMEA3368571	GCA_001180205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/205/GCA_001180205.1_CLC_assembled_contigs	-	SCGC AAA795-P11
Corynebacterium jeikeium	38289	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.45893	58.9	-	JVIP01	44	2140	2054	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197591	GCA_001076435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/435/GCA_001076435.1_ASM107643v1	26230489	401_CJEI
Ralstonia solanacearum	305	PRJEB7421	268813	Proteobacteria	Betaproteobacteria	5.59607	66.1	-	CDMA01	1	5297	4477	1/5/15	4/3/17	Scaffold	CIRAD	SAMEA3137592	GCA_000825785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/785/GCA_000825785.2_B50	-	B50
Streptococcus anginosus C1051	862970	PRJNA50423	50423	Terrabacteria group	Firmicutes	1.91171	39	chromosome:NC_022244.1/CP003860.1	-	1	1908	1755	9/3/13	4/1/17	Complete Genome	"National Microbiology Laboratory, Public Health Agency of Canada"	SAMN02603662	GCA_000463465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/465/GCA_000463465.1_ASM46346v1	24341328	C1051
Acinetobacter baumannii TYTH-1	1100841	PRJNA74551	74551	Proteobacteria	Gammaproteobacteria	3.95737	39	chromosome:NC_018706.1/CP003856.1	-	1	3795	3628	10/3/12	3/15/17	Complete Genome	National Tsing Hua University	SAMN02603667	GCA_000302575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/575/GCA_000302575.1_ASM30257v1	23209228	TYTH-1
Bacillus pumilus ATCC 7061	536229	PRJNA29785	29785	Terrabacteria group	Firmicutes	3.834	41.7	-	ABRX01	16	3973	3769	7/9/08	3/30/17	Contig	J. Craig Venter Institute	SAMN02470256	GCA_000172815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/815/GCA_000172815.1_ASM17281v1	-	ATCC 7061
Helicobacter pylori PeCan18	1163742	PRJNA95275	95275	Proteobacteria	delta/epsilon subdivisions	1.66068	39	chromosome:NC_017742.1/CP003475.1	-	1	1622	1467	4/19/12	3/23/17	Complete Genome	"Dept. Molec. Microbiology, Washington University Medical School in Saint Louis"	SAMN02603196	GCA_000277425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/425/GCA_000277425.1_ASM27742v1	-	PeCan18
Parachlamydia acanthamoebae UV-7	765952	PRJEA49033	49033	PVC group	Chlamydiae	3.07238	39	chromosome:NC_015702.1/FR872580.1	-	1	2637	2532	6/21/11	3/22/17	Complete Genome	"University of Vienna, Dept. of Microbial Ecology"	SAMEA2272163	GCA_000253035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/035/GCA_000253035.1_ASM25303v1	21690563	UV-7
Burkholderia cenocepacia PT15	1167689	PRJNA114703	114703	Proteobacteria	Betaproteobacteria	7.64846	66.8	-	AXZX01	516	7462	6779	5/12/14	3/24/17	Contig	Macquarie University	SAMN02769654	GCA_000689555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/555/GCA_000689555.1_PT15	-	PT15
Lactobacillus reuteri	1598	PRJNA344848	344848	Terrabacteria group	Firmicutes	2.30223	39	-	MKQH01	14	2236	2013	12/6/16	4/6/17	Contig	University of Groningen	SAMN05788099	GCA_001889975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/975/GCA_001889975.1_ASM188997v1	-	121
Streptococcus thermophilus MTH17CL396	1433288	PRJNA230626	230626	Terrabacteria group	Firmicutes	1.82822	38.9943	chromosome:NZ_CM002371.1/CM002371.1	AZJS01	49	1963	1649	1/20/14	4/18/17	Chromosome	University of Padua	SAMN02437281	GCA_000521325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/325/GCA_000521325.1_MTH17CL396VE	24526643	MTH17CL396
Bacteroides fragilis str. 3976T7	1339313	PRJNA206156	206156	FCB group	Bacteroidetes/Chlorobi group	5.22526	43.6	-	JGCU01	447	4694	4344	3/20/14	4/18/17	Contig	IGS	SAMN02314536	GCA_000598165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/165/GCA_000598165.1_ASM59816v1	-	3976T7
Shigella sonnei	624	PRJEB2075	203826	Proteobacteria	Gammaproteobacteria	4.918	50.4	-	CXMH01	442	5594	4740	7/16/15	2/24/17	Contig	SC	SAMEA1560472	GCA_001247385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/385/GCA_001247385.1_8489_2_91	-	92497764
Chlamydia psittaci C19/98	1112250	PRJNA66483	66483	PVC group	Chlamydiae	1.16937	39	chromosome:NC_017291.1/CP002804.1	-	1	1035	977	6/2/11	9/4/17	Complete Genome	Leibniz Institute for Natural Product Research and Infection Biology	SAMN02603519	GCA_000270385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/385/GCA_000270385.1_ASM27038v1	21705611	C19/98
Bacillus licheniformis	1402	PRJNA260738	260738	Terrabacteria group	Firmicutes	4.17371	46.3	-	JYBQ01	4	4297	4107	3/5/15	4/3/17	Contig	Los Alamos National Laboratory	SAMN03025777	GCA_000948275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/275/GCA_000948275.1_BFA_12_A	-	5NAP23
Histophilus somni	731	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.27569	37.3	-	LQGF01	66	2139	1988	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366579	GCA_001931405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/405/GCA_001931405.1_ASM193140v1	-	3669HS
Vibrio vulnificus	672	PRJNA258251	258251	Proteobacteria	Gammaproteobacteria	5.28465	46.4	-	JQDU01	542	4912	4481	8/22/14	4/2/17	Contig	Emek Medical center	SAMN02990646	GCA_000743115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/115/GCA_000743115.1_ASM74311v1	25642229	491771
Pseudomonas syringae pv. actinidiae KW41	1094177	PRJNA73861	73861	Proteobacteria	Gammaproteobacteria	5.92183	58.7	-	AGNP01	428	5673	5189	12/30/11	5/19/17	Scaffold	University of Exeter	SAMN02471723	GCA_000245435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/435/GCA_000245435.1_ASM24543v1	-	KW41
Streptococcus thermophilus ND03	767463	PRJNA49149	49149	Terrabacteria group	Firmicutes	1.83195	39	chromosome:NC_017563.1/CP002340.1	-	1	1968	1692	11/19/10	4/11/17	Complete Genome	"The Key Laboratory of Dairy Biotechnology and Bioengineering, Education Ministry of P. R. China, Department of Food Science and Engineering, Inner Mongolia Agricultural University, China"	SAMN02603938	GCA_000182875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/182/875/GCA_000182875.1_ASM18287v1	21131489	ND03
Sulfurospirillum deleyianum DSM 6946	525898	PRJNA29529	29529	Proteobacteria	delta/epsilon subdivisions	2.30635	39	chromosome:NC_013512.1/CP001816.1	-	1	2336	2258	11/18/09	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002613	GCA_000024885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/885/GCA_000024885.1_ASM2488v1	21304697	DSM 6946
Acinetobacter baumannii AB307-0294	557600	PRJNA30993	30993	Proteobacteria	Gammaproteobacteria	3.76098	39	chromosome:NC_011595.1/CP001172.1	-	1	3544	3360	11/24/08	3/15/17	Complete Genome	SUNY-Buffalo-CoE	SAMN02603889	GCA_000021145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/145/GCA_000021145.1_ASM2114v1	18931120	AB307-0294
Ruminiclostridium thermocellum ATCC 27405	203119	PRJNA314	314	Terrabacteria group	Firmicutes	3.8433	39	chromosome:NC_009012.1/CP000568.1	-	1	3391	3204	2/14/07	8/28/17	Complete Genome	DOE Joint Genome Institute	SAMN02598481	GCA_000015865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/865/GCA_000015865.1_ASM1586v1	24295562	ATCC 27405
Bifidobacterium longum subsp. longum ATCC 55813	548480	PRJNA31437	31437	Terrabacteria group	Actinobacteria	2.39636	60.1	-	ACHI01	114	2051	1908	3/10/09	3/30/17	Scaffold	Baylor College of Medicine	SAMN00001475	GCA_000003135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/003/135/GCA_000003135.1_ASM313v1	-	ATCC 55813
Fusobacterium nucleatum CTI-5	1316586	PRJNA197116	197116	Fusobacteria	Fusobacteriia	2.39178	27	-	AXNW01	33	2387	2244	10/22/13	4/2/17	Scaffold	Broad Institute	SAMN02597023	GCA_000479225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/225/GCA_000479225.1_Fuso_nucl_CTI-5_V1	-	CTI-5
Agrobacterium tumefaciens str. B6	1183423	PRJNA300485	300485	Proteobacteria	Alphaproteobacteria	5.65777	59.3	-	LMVK01	52	5514	5242	1/26/16	4/4/17	Contig	Monash University Malaysia	SAMN04223554	GCA_001541315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/315/GCA_001541315.1_ASM154131v1	-	B6
Shigella flexneri 2930-71	766159	PRJNA49099	49099	Proteobacteria	Gammaproteobacteria	4.64464	50.9	-	AFHD01	50	5054	4107	5/12/11	8/4/17	Contig	Institute for Genome Sciences	SAMN00792448	GCA_000213495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/495/GCA_000213495.2_ASM21349v2	-	2930-71
Acinetobacter baumannii	470	PRJNA339690	339690	Proteobacteria	Gammaproteobacteria	4.05443	38.9987	chromosome:NZ_CP017654.1/CP017654.1; plasmid unnamed:NZ_CP017655.1/CP017655.1	-	2	3944	3747	10/21/16	3/20/17	Complete Genome	Korea Basic Science Institute	SAMN05601672	GCA_001806465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/465/GCA_001806465.1_ASM180646v1	-	KAB07
Acinetobacter baumannii	470	PRJEB12156	308974	Proteobacteria	Gammaproteobacteria	3.94749	38.9973	chromosome I:NZ_LN997846.1/LN997846.1; plasmid II:NZ_LN997847.1/LN997847.1	-	2	3719	3566	1/15/16	3/19/17	Complete Genome	CEBITEC	SAMEA3715145	GCA_001517645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/645/GCA_001517645.1_R2091	-	-
Xylella fastidiosa Mul-MD	1403344	PRJNA219739	219739	Proteobacteria	Gammaproteobacteria	2.52055	51.6	-	AXDP01	101	2442	2159	2/10/14	4/2/17	Contig	FNPRU-USNA-ARS-USDA	SAMN02630185	GCA_000567985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/985/GCA_000567985.1_Xylella_fastidiosa_Mul-MD	24604658	Mul-MD
Helicobacter pylori SNT49	1055530	PRJNA69921	69921	Proteobacteria	delta/epsilon subdivisions	1.61083	38.9968	chromosome:NC_017376.1/CP002983.1; plasmid pHPSNT:NC_017380.1/CP002984.1	-	2	1579	1427	8/26/11	3/22/17	Complete Genome	Washington University Medical School	SAMN02604322	GCA_000224575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/575/GCA_000224575.1_ASM22457v1	-	Santal49
Actinobacillus pleuropneumoniae	715	PRJNA266371	266371	Proteobacteria	Gammaproteobacteria	2.2194	41.1	-	JSVX01	59	2127	1757	1/12/15	4/2/17	Contig	LNCC	SAMN03162179	GCA_000817535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/535/GCA_000817535.1_ASM81753v1	25745011	597
Leptospira interrogans serovar Copenhageni str. Fiocruz LV224	996815	PRJNA63727	63727	Spirochaetes	Spirochaetia	4.86858	34.9	-	AFJT02	409	4373	3942	6/7/11	4/10/17	Contig	J. Craig Venter Institute	SAMN00254379	GCA_000217335.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/335/GCA_000217335.3_CA_glsol083	-	Fiocruz LV224
Acinetobacter baumannii	470	PRJNA380857	380857	Proteobacteria	Gammaproteobacteria	3.93873	38.9957	chromosome:NZ_CP020590.1/CP020590.1; plasmid p15A34_1:NZ_CP020589.1/CP020589.1	-	2	3799	3605	4/10/17	4/13/17	Complete Genome	Yonsei University College of medicine	SAMN06650243	GCA_002082685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/685/GCA_002082685.1_ASM208268v1	-	15A34
Acinetobacter baumannii	470	PRJNA309091	309091	Proteobacteria	Gammaproteobacteria	4.15525	38.9946	chromosome:NZ_CP014215.1/CP014215.1; plasmid unnamed1:NZ_CP014216.1/CP014216.1; plasmid unnamed2:NZ_CP014217.1/CP014217.1	-	3	4066	3868	2/2/16	3/19/17	Complete Genome	Yonsei university college of medicine	SAMN04448797	GCA_001543995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/995/GCA_001543995.1_ASM154399v1	27139604	YU-R612
Helicobacter pylori SS1	102617	PRJNA256258	256258	Proteobacteria	delta/epsilon subdivisions	1.62494	38.9939	chromosome:NZ_CP009259.1/CP009259.1; plasmid pHPLYSS1:NZ_CP009260.1/CP009260.1	-	2	1585	1432	2/22/17	2/24/17	Complete Genome	University of California at Santa Cruz	SAMN03331743	GCA_002005525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/525/GCA_002005525.1_ASM200552v1	28223462	SS1
Acinetobacter baumannii	470	PRJNA380857	380857	Proteobacteria	Gammaproteobacteria	4.02318	38.9937	chromosome:NZ_CP020581.1/CP020581.1; plasmid pSSMA17_1:NZ_CP020580.1/CP020580.1	-	2	3906	3728	4/10/17	4/13/17	Complete Genome	Yonsei University College of medicine	SAMN06650261	GCA_002082885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/885/GCA_002082885.1_ASM208288v1	-	SSMA17
Helicobacter pylori PMSS1	1431450	PRJNA306775	306775	Proteobacteria	delta/epsilon subdivisions	1.62454	38.9929	chromosome:NZ_CP018823.1/CP018823.1; plasmid pHPYLPMSS1:NZ_CP018824.1/CP018824.1	-	2	1588	1438	2/10/17	3/29/17	Complete Genome	"University of California, Davis"	SAMN04362855	GCA_001991095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/095/GCA_001991095.1_ASM199109v1	-	PMSS1
Acinetobacter baumannii	470	PRJNA339683	339683	Proteobacteria	Gammaproteobacteria	4.0862	38.9927	chromosome:NZ_CP017644.1/CP017644.1; plasmid unnamed:NZ_CP017645.1/CP017645.1	-	2	3980	3790	10/21/16	3/20/17	Complete Genome	Korea Basic Science Institute	SAMN05601667	GCA_001806365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/365/GCA_001806365.1_ASM180636v1	-	KAB02
Haemophilus influenzae 6P18H1	521004	PRJNA29317	29317	Proteobacteria	Gammaproteobacteria	1.91224	38.2	-	ABWW01	28	1956	1789	5/8/09	3/22/17	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393767	GCA_000173335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/335/GCA_000173335.1_ASM17333v1	22970300	6P18H1
Prochlorococcus marinus str. MIT 9321	167549	PRJNA246696	246696	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.65866	31.2	-	JNAP01	10	1852	1791	9/29/14	4/2/17	Contig	MIT	SAMN02769559	GCA_000760055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/055/GCA_000760055.1_ASM76005v1	25977791	MIT 9321
Mycobacterium bovis BCG str. Frappier	1195237	PRJNA167545	167545	Terrabacteria group	Actinobacteria	4.24151	65.5	-	AKYQ01	178	4195	3944	8/30/13	4/2/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control, China"	SAMN02470646	GCA_000463175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/175/GCA_000463175.1_BCG_Frappier	23977002	Frappier
Mycobacterium avium subsp. paratuberculosis CLIJ623	1029814	PRJNA66639	66639	Terrabacteria group	Actinobacteria	4.52332	69	-	AFHX01	915	4732	3873	6/7/11	5/19/17	Contig	The Commonwealth Scientific and Industrial Research Organisation (CSIRO)	SAMN00222100	GCA_000216015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/015/GCA_000216015.2_ASM21601v2	-	CLIJ623
Clostridium perfringens D str. JGS1721	488537	PRJNA28587	28587	Terrabacteria group	Firmicutes	4.04502	28.3	-	ABOO01	221	3686	3314	4/8/08	4/6/17	Contig	J. Craig Venter Institute	SAMN02436277	GCA_000172455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/455/GCA_000172455.1_ASM17245v1	-	JGS1721
Xanthomonas campestris pv. musacearum NCPPB 4394	1094187	PRJNA73883	73883	Proteobacteria	Gammaproteobacteria	4.79262	63.2	-	AKBJ01	85	4534	3828	7/17/12	5/19/17	Scaffold	University of Exeter	SAMN00991245	GCA_000277975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/975/GCA_000277975.1_Xcm4394v1	24704974	NCPPB 4394
Helicobacter pylori	210	PRJNA264984	264984	Proteobacteria	delta/epsilon subdivisions	1.63128	38.9895	chromosome:NZ_CP012905.1/CP012905.1; plasmid unnamed:NZ_CP012906.1/CP012906.1	-	2	1593	1427	11/5/15	3/27/17	Complete Genome	Universidad Nacional Autonoma de Mexico	SAMN03144736	GCA_001433515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/515/GCA_001433515.1_ASM143351v1	26744372	7C
Acinetobacter baumannii	470	PRJNA380857	380857	Proteobacteria	Gammaproteobacteria	4.06472	38.9872	chromosome:NZ_CP020578.1/CP020578.1; plasmid pSSA12_1:NZ_CP020577.1/CP020577.1; plasmid pSSA12_2:NZ_CP020576.1/CP020576.1	-	3	3957	3776	4/10/17	4/13/17	Complete Genome	Yonsei University College of medicine	SAMN06650263	GCA_002082865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/865/GCA_002082865.1_ASM208286v1	-	SSA12
Staphylococcus epidermidis VCU045	904321	PRJNA53725	53725	Terrabacteria group	Firmicutes	2.48167	32.1	-	AFEI01	62	2468	2315	4/20/11	3/22/17	Contig	J. Craig Venter Institute	SAMN00116874	GCA_000205425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/205/425/GCA_000205425.2_ASM20542v2	-	VCU045
Acinetobacter baumannii D1279779	945556	PRJNA61919	61919	Proteobacteria	Gammaproteobacteria	3.7117	38.9872	chromosome:NC_020547.2/CP003967.2; plasmid pD1279779:NC_020525.1/CP003968.1	-	2	3564	3369	3/20/13	3/16/17	Complete Genome	Macquarie University	SAMN02603576	GCA_000186665.4	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/665/GCA_000186665.4_ASM18666v4	"220,926,792,352,700,000,000,000"	D1279779
Acinetobacter baumannii	470	PRJNA311558	311558	Proteobacteria	Gammaproteobacteria	4.09204	38.9868	chromosome:NZ_CP015364.1/CP015364.1; plasmid pAba3207a:NZ_CP015365.1/CP015365.1; plasmid pAba3207b:NZ_CP015366.1/CP015366.1	-	3	4008	3788	5/3/16	3/20/17	Complete Genome	"Center for Genomic Sciences, National Autonomous University of Mexico (UNAM)"	SAMN04485290	GCA_001636235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/235/GCA_001636235.1_ASM163623v1	27340065	3207
Pseudomonas fluorescens SS101	1038924	PRJNA67539	67539	Proteobacteria	Gammaproteobacteria	6.17954	60	chromosome:NZ_CM001513.1/CM001513.1	AHPN01	1	11139	10807	5/21/12	6/15/17	Chromosome	"USDA - Agricultural Research Service, USA"	SAMN02436383	GCA_000263675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/675/GCA_000263675.2_ASM26367v2	22792073	SS101
Acinetobacter pittii	48296	PRJNA387671	387671	Proteobacteria	Gammaproteobacteria	4.18287	38.9865	chromosome:NZ_CP021428.1/CP021428.1; plasmid p11:NZ_CP021429.1/CP021429.1	-	2	4116	3889	5/30/17	6/1/17	Complete Genome	IDIVAL Research Institute	SAMN07160582	GCA_002158945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/158/945/GCA_002158945.1_ASM215894v1	-	HUMV-6483
Acinetobacter baumannii	470	PRJNA328023	328023	Proteobacteria	Gammaproteobacteria	3.98869	38.9864	chromosome:NZ_CP018677.1/CP018677.1; plasmid pALAC4-1:NZ_CP018678.1/CP018678.1; plasmid pALAC4-2:NZ_CP018679.1/CP018679.1	-	3	3863	3617	12/19/16	3/21/17	Complete Genome	JCVI	SAMN05362953	GCA_001908295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/295/GCA_001908295.1_ASM190829v1	-	LAC4
Acinetobacter baumannii LAC-4	1455315	PRJNA242902	242902	Proteobacteria	Gammaproteobacteria	3.96844	38.9863	chromosome:NZ_CP007712.1/CP007712.1; plasmid pABLAC1:NZ_CP007713.1/CP007713.1; plasmid pABLAC2:NZ_CP007714.1/CP007714.1	-	3	3839	3591	11/25/14	3/16/17	Complete Genome	"California State University, Los Angeles"	SAMN02709859	GCA_000786735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/735/GCA_000786735.1_ASM78673v1	25728466	LAC-4
Acinetobacter baumannii	470	PRJNA296424	296424	Proteobacteria	Gammaproteobacteria	4.17416	38.9762	chromosome:NZ_CP016300.1/CP016300.1; plasmid pCMCVTAb1-AB66:NZ_CP016301.1/CP016301.1; plasmid pCMCVTAb2-AB66:NZ_CP016302.1/CP016302.1	-	3	4045	3838	12/27/16	3/21/17	Complete Genome	Virginia Tech	SAMN04096370	GCA_001922245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/245/GCA_001922245.1_ASM192224v1	-	CMC-CR-MDR-Ab66
Acinetobacter baumannii	470	PRJNA296424	296424	Proteobacteria	Gammaproteobacteria	4.15601	38.9749	chromosome:NZ_CP016295.1/CP016295.1; plasmid pCMCVTAb1-AB4:NZ_CP016296.1/CP016296.1; plasmid pCMCVTAb2-AB4:NZ_CP016297.1/CP016297.1	-	3	4021	3822	12/27/16	3/21/17	Complete Genome	Virginia Tech	SAMN04096368	GCA_001922205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/205/GCA_001922205.1_ASM192220v1	-	CMC-CR-MDR-Ab4
Helicobacter pylori v225d	637913	PRJNA36609	36609	Proteobacteria	delta/epsilon subdivisions	1.5956	38.972	chromosome:NC_017355.1/CP001582.1; plasmid pHPv225d:NC_017383.1/CP001583.1	-	2	1574	1430	6/3/10	3/22/17	Complete Genome	The Pathosystems Resource Integration Center (PATRIC)	SAMN00003101	GCA_000093185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/093/185/GCA_000093185.1_ASM9318v1	20400544	v225d
Pseudomonas fluorescens Q8r1-96	1038923	PRJNA67537	67537	Proteobacteria	Gammaproteobacteria	6.60261	60.9488	chromosome:NZ_CM001512.1/CM001512.1	AHPO01	1	12071	11785	5/21/12	6/15/17	Chromosome	"USDA - Agricultural Research Service, USA"	SAMN02436384	GCA_000263695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/695/GCA_000263695.2_ASM26369v2	22792073	Q8r1-96
Acinetobacter baumannii	470	PRJNA339686	339686	Proteobacteria	Gammaproteobacteria	4.12812	38.9646	chromosome:NZ_CP017648.1/CP017648.1; plasmid unnamed:NZ_CP017649.1/CP017649.1	-	2	4018	3799	10/21/16	3/20/17	Complete Genome	Korea Basic Science Institute	SAMN05601669	GCA_001806405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/405/GCA_001806405.1_ASM180640v1	-	KAB04
Chlamydia psittaci VS225	1218355	PRJNA171915	171915	PVC group	Chlamydiae	1.16494	38.9605	chromosome:NC_018621.1/CP003793.1; plasmid pcpVS225:NC_018638.1/CP003817.1	-	2	1042	895	9/19/12	4/10/17	Complete Genome	"University of Maryland, Baltimore"	SAMN02604209	GCA_000298455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/455/GCA_000298455.2_ASM29845v2	23209198	VS225
Staphylococcus epidermidis VCU109	904330	PRJNA53741	53741	Terrabacteria group	Firmicutes	2.3905	32.1	-	AFUA01	56	2388	2244	7/26/11	3/22/17	Contig	J. Craig Venter Institute	SAMN00116832	GCA_000221665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/665/GCA_000221665.2_ASM22166v2	-	VCU109
Chlamydia psittaci WS/RT/E30	1218356	PRJNA171916	171916	PVC group	Chlamydiae	1.14834	38.9599	chromosome:NC_018622.1/CP003794.1; plasmid pcpWSRTE30:NC_018640.1/CP003819.1	-	2	1033	949	9/19/12	3/30/17	Complete Genome	"University of Maryland, Baltimore"	SAMN02604210	GCA_000298475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/475/GCA_000298475.2_ASM29847v2	23209198	WS/RT/E30
Chlamydia psittaci NJ1	1050221	PRJNA172451	172451	PVC group	Chlamydiae	1.16899	38.9599	chromosome:NC_018626.1/CP003798.1; plasmid pcpNJ1:NC_018637.1/CP003816.1	-	2	1038	974	9/19/12	3/30/17	Complete Genome	"University of Maryland, Baltimore"	SAMN02604214	GCA_000298555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/555/GCA_000298555.2_ASM29855v2	23209198	NJ1
Xanthomonas campestris pv. campestris str. Xca5	1211707	PRJNA170904	170904	Proteobacteria	Gammaproteobacteria	5.00186	65.1	-	CAOR02	14	4486	4169	11/19/12	4/2/17	Scaffold	CNRS	SAMEA3138429	GCA_000321125.4	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/125/GCA_000321125.4_ASM32112v4	-	Xca5
Clostridium perfringens JJC	1386970	PRJNA215269	215269	Terrabacteria group	Firmicutes	3.25933	28.1	-	AWRZ01	69	2926	2813	11/22/13	4/2/17	Contig	Monash University	SAMN02317206	GCA_000512415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/415/GCA_000512415.1_JJC_1.0	24604637	JJC
Mycobacterium avium subsp. paratuberculosis Pt139	1029815	PRJNA66641	66641	Terrabacteria group	Actinobacteria	4.64733	69.1	-	AFPC01	752	4720	4035	6/13/11	5/19/17	Contig	The Commonwealth Scientific and Industrial Research Organisation (CSIRO)	SAMN00222093	GCA_000218035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/035/GCA_000218035.2_ASM21803v2	-	Pt139
Mycobacterium bovis BCG str. Glaxo	1195465	PRJNA167549	167549	Terrabacteria group	Actinobacteria	4.20529	65.4	-	AKYR01	327	4276	3917	8/30/13	4/2/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control, China"	SAMN02470641	GCA_000463195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/195/GCA_000463195.1_BCG_Glaxo	23977002	Glaxo
Prochlorococcus marinus str. MIT 9322	167550	PRJNA246696	246696	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.65755	31.2	-	JNAQ01	11	1853	1793	9/29/14	4/2/17	Contig	MIT	SAMN02769560	GCA_000760075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/075/GCA_000760075.1_ASM76007v1	25977791	MIT 9322
Haemophilus influenzae NT127	656913	PRJNA39125	39125	Proteobacteria	Gammaproteobacteria	1.86567	38	-	ACSL01	41	1892	1756	9/29/09	3/22/17	Contig	Broad Institute	SAMN02595334	GCA_000175435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/435/GCA_000175435.1_ASM17543v1	-	NT127
Acinetobacter baumannii BJAB07104	1096995	PRJNA74421	74421	Proteobacteria	Gammaproteobacteria	4.04223	38.9501	chromosome:NC_021726.1/CP003846.1; plasmid p1BJAB07104:NC_021727.1/CP003887.1; plasmid p2BJAB07104:NC_021728.1/CP003907.1	-	3	3910	3735	7/9/13	3/15/17	Complete Genome	University of Texas at Dallas	SAMN02604244	GCA_000419385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/385/GCA_000419385.1_ASM41938v1	23826102	BJAB07104
Legionella hackeliae	449	PRJEB7321	264512	Proteobacteria	Gammaproteobacteria	3.57086	38.9454	chromosome I:NZ_LN681225.1/LN681225.1; plasmid II:NZ_LN681226.1/LN681226.1	-	2	3204	3071	12/9/14	4/10/17	Complete Genome	INSTITUT PASTEUR	SAMEA2785664	GCA_000953655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/655/GCA_000953655.1_LHA	-	ATCC35250
Acinetobacter baumannii	470	PRJNA288605	288605	Proteobacteria	Gammaproteobacteria	4.0067	38.9442	chromosome:NZ_CP012004.1/CP012004.1; plasmid pAB3:NZ_CP012005.1/CP012005.1	-	2	3840	3667	7/14/15	3/17/17	Complete Genome	University of Alberta	SAMN03817043	GCA_001077675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/675/GCA_001077675.1_ASM107767v1	26170289	ATCC 17978-mff
Pseudoalteromonas sp. 1_2015MBL_MicDiv	1720343	PRJNA296374	296374	Proteobacteria	Gammaproteobacteria	4.85988	38.944	chromosome 1:CP012737.1; chromosome 2:CP012738.1	-	2	4257	4039	10/2/17	10/2/17	Complete Genome	UC Davis	SAMN04096401	GCA_002407505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/407/505/GCA_002407505.1_ASM240750v1	-	1_2015MBL_MicDiv
Lactobacillus reuteri I5007	1340495	PRJNA206042	206042	Terrabacteria group	Firmicutes	2.09328	38.9404	chromosome:NC_021494.1/CP006011.1; plasmid pLRI01:NC_021503.1/CP006012.1; plasmid pLRI02:NC_021495.1/CP006013.1; plasmid pLRI022:NC_021496.1/CP006014.1; plasmid pLRI023:NC_021504.1/CP006015.1; plasmid pLRI024:NC_021497.1/CP006016.1; plasmid pLRI025:NC_021498.1/CP006017.1	-	7	2091	1910	6/14/13	4/1/17	Complete Genome	China Agricultural University	SAMN02603119	GCA_000410995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/995/GCA_000410995.1_ASM41099v1	-	I5007
Aliivibrio salmonicida LFI1238	316275	PRJEA30703	30703	Proteobacteria	Gammaproteobacteria	4.65566	38.9398	chromosome 1:NC_011312.1/FM178379.1; chromosome 2:NC_011313.1/FM178380.1; plasmid pVSAL320:NC_011314.1/FM178382.1; plasmid pVSAL43:NC_011316.1/FM178384.1; plasmid pVSAL54:NC_011315.1/FM178383.1; plasmid pVSAL840:NC_011311.1/FM178381.1	-	6	4494	4004	10/1/08	5/18/17	Complete Genome	"The Pathogen Sequencing Unit, The Wellcome Trust Sanger Institute"	SAMEA1705917	GCA_000196495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/495/GCA_000196495.1_ASM19649v1	19099551	LFI1238
Leptospira interrogans str. 2002000624	996802	PRJNA63709	63709	Spirochaetes	Spirochaetia	4.91855	35.2	-	AFJK02	66	4471	4038	6/7/11	5/18/17	Contig	J. Craig Venter Institute	SAMN02436548	GCA_000217515.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/515/GCA_000217515.3_gls454027v2.0	-	2002000624
Actinobacillus pleuropneumoniae serovar 1 str. 4074	228399	PRJNA198	198	Proteobacteria	Gammaproteobacteria	2.29235	41.4	-	AACK01	140	2219	1987	4/21/03	3/30/17	Scaffold	Univ. Oklahoma	SAMN02471910	GCA_000167095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/095/GCA_000167095.1_ASM16709v1	-	4074
Acinetobacter baumannii BJAB0868	1096997	PRJNA74425	74425	Proteobacteria	Gammaproteobacteria	4.00582	38.9394	chromosome:NC_021729.1/CP003849.1; plasmid p1BJAB0868:NC_021730.1/CP003850.1; plasmid p2BJAB0868:NC_021731.1/CP003888.1; plasmid p3BJAB0868:NC_021732.1/CP003908.1	-	4	3861	3684	7/9/13	3/15/17	Complete Genome	University of Texas at Dallas	SAMN02604246	GCA_000419425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/425/GCA_000419425.1_ASM41942v1	23826102	BJAB0868
Xylella fastidiosa	2371	PRJNA242875	242875	Proteobacteria	Gammaproteobacteria	2.47588	51.6	-	JMHP01	128	2363	2109	7/22/14	4/2/17	Contig	Beltsville Agricultural Research Center	SAMN02709772	GCA_000732705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/705/GCA_000732705.1_ASM73270v1	25146135	sycamore Sy-VA
Pseudomonas putida	303	PRJEB18870	360777	Proteobacteria	Gammaproteobacteria	5.72916	62	chromosome I:NZ_LT707061.1/LT707061.1	-	1	5311	5107	1/14/17	4/6/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216501	GCA_900156185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/185/GCA_900156185.1_IMG-taxon_2681812805_annotated_assembly	-	N1R
Acinetobacter baumannii	470	PRJNA288605	288605	Proteobacteria	Gammaproteobacteria	4.19228	38.9197	chromosome:NZ_CP012006.1/CP012006.1; plasmid pAB04-1:NZ_CP012007.1/CP012007.1; plasmid pAB04-2:NZ_CP012008.1/CP012008.1	-	3	4105	3893	7/14/15	3/17/17	Complete Genome	University of Alberta	SAMN03817045	GCA_001077655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/655/GCA_001077655.1_ASM107765v1	26170289	Ab04-mff
Shigella flexneri VA-6	766145	PRJNA49069	49069	Proteobacteria	Gammaproteobacteria	4.67912	50.9	-	AFGW01	70	5163	4209	5/13/11	8/4/17	Contig	Institute for Genome Sciences	SAMN00792440	GCA_000213695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/695/GCA_000213695.2_ASM21369v2	-	VA-6
Agrobacterium tumefaciens	358	PRJNA319130	319130	Proteobacteria	Alphaproteobacteria	5.2828	58.7	-	LXPS01	41	5148	4933	5/10/16	4/5/17	Contig	University of Florida	SAMN04942898	GCA_001641425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/425/GCA_001641425.1_ASM164142v1	-	KCJK1736
Fusobacterium nucleatum CTI-3	1204476	PRJNA170358	170358	Fusobacteria	Fusobacteriia	2.20557	26.9	-	AXNX01	6	2150	2023	10/22/13	4/2/17	Scaffold	Broad Institute	SAMN02597024	GCA_000479245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/245/GCA_000479245.1_Fuso_nucl_CTI-3_V1	-	CTI-3
Bifidobacterium longum subsp. infantis CCUG 52486	537937	PRJNA30065	30065	Terrabacteria group	Actinobacteria	2.48085	60	-	ABQQ01	22	2206	2067	8/26/08	3/30/17	Scaffold	Broad Institute	SAMN02463677	GCA_000155415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/415/GCA_000155415.1_ASM15541v1	-	CCUG 52486
Acinetobacter baumannii BJAB0715	1096996	PRJNA74423	74423	Proteobacteria	Gammaproteobacteria	4.05389	38.9193	chromosome:NC_021733.1/CP003847.1; plasmid pBJAB0715:NC_021734.1/CP003848.1	-	2	3918	3726	7/9/13	3/15/17	Complete Genome	University of Texas at Dallas	SAMN02604245	GCA_000419405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/405/GCA_000419405.1_ASM41940v1	23826102	BJAB0715
Acinetobacter baumannii	470	PRJNA356204	356204	Proteobacteria	Gammaproteobacteria	4.08062	38.912	chromosome:NZ_CP018421.1/CP018421.1; plasmid pBJ83:NZ_CP018422.1/CP018422.1	-	2	3942	3703	12/13/16	3/20/17	Complete Genome	Chinese PLA General Hospital	SAMN06109232	GCA_001902375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/375/GCA_001902375.1_ASM190237v1	-	XDR-BJ83
Acinetobacter baumannii	470	PRJNA339684	339684	Proteobacteria	Gammaproteobacteria	4.05696	38.9035	chromosome:NZ_CP017646.1/CP017646.1; plasmid unnamed:NZ_CP017647.1/CP017647.1	-	2	3920	3701	10/21/16	3/20/17	Complete Genome	Korea Basic Science Institute	SAMN05601668	GCA_001806385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/385/GCA_001806385.1_ASM180638v1	-	KAB03
Acinetobacter baumannii	470	PRJNA339667	339667	Proteobacteria	Gammaproteobacteria	4.03409	38.9034	chromosome:NZ_CP017642.1/CP017642.1; plasmid unnamed:NZ_CP017643.1/CP017643.1	-	2	3894	3639	10/21/16	3/20/17	Complete Genome	Korea Basic Science Institute	SAMN05601665	GCA_001806345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/345/GCA_001806345.1_ASM180634v1	-	KAB01
Pseudomonas syringae pv. actinidiae PA459	1094178	PRJNA73865	73865	Proteobacteria	Gammaproteobacteria	6.46132	58.3	-	AGNQ01	390	6312	5721	12/30/11	5/19/17	Scaffold	University of Exeter	SAMN02471732	GCA_000245455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/455/GCA_000245455.1_ASM24545v1	-	PA459
Vibrio vulnificus	672	PRJNA258252	258252	Proteobacteria	Gammaproteobacteria	5.4845	46.3	-	JQDT01	367	4972	4721	8/22/14	4/2/17	Contig	Emek Medical center	SAMN02990647	GCA_000743155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/155/GCA_000743155.1_ASM74315v1	25642229	101/4
Histophilus somni	731	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.14528	37.2	-	LQGI01	58	1989	1868	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366582	GCA_001931415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/415/GCA_001931415.1_ASM193141v1	-	3768HS
Bacillus licheniformis	1402	PRJNA275555	275555	Terrabacteria group	Firmicutes	4.39228	45.6	-	JYGX01	24	4625	4110	3/13/15	4/21/17	Contig	Thompson Rivers University	SAMN03349712	GCA_000952085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/085/GCA_000952085.1_ASM95208v1	-	GB2
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'	355278	PRJNA16153	16153	Spirochaetes	Spirochaetia	3.95609	38.9019	chromosome I:NC_010842.1/CP000777.1; chromosome II:NC_010845.1/CP000778.1; plasmid p74:NC_010846.1/CP000779.1	-	3	3775	3691	2/13/08	4/6/17	Complete Genome	Monash University	SAMN02603617	GCA_000017605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/605/GCA_000017605.1_ASM1760v1	18270594	Patoc 1 (Ames)
Shigella sonnei	624	PRJEB2075	203826	Proteobacteria	Gammaproteobacteria	4.89681	50.5	-	CXMF01	428	5552	4708	7/16/15	2/24/17	Contig	SC	SAMEA1560484	GCA_001248605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/605/GCA_001248605.1_8489_2_90	-	37370664
Bacteroides fragilis str. 3986T(B)10	1339302	PRJNA206145	206145	FCB group	Bacteroidetes/Chlorobi group	5.02877	43.4	-	JGCV01	313	4498	4143	3/20/14	4/4/17	Contig	IGS	SAMN02314537	GCA_000598185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/185/GCA_000598185.2_ASM59818v2	-	3986T(B)10
Streptococcus thermophilus TH982	1435974	PRJNA231305	231305	Terrabacteria group	Firmicutes	1.78931	38.8933	chromosome:NZ_CM003136.1/CM003136.1	AZTL01	52	1917	1619	2/14/14	4/11/17	Chromosome	University of Padua	SAMN02442657	GCA_000572065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/065/GCA_000572065.1_TH982VE	24625867	TH982
Lactobacillus reuteri	1598	PRJNA373841	373841	Terrabacteria group	Firmicutes	2.05912	38.8	-	MUZP01	87	2063	1859	2/27/17	3/2/17	Contig	Kingston University	SAMN06315550	GCA_002007085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/085/GCA_002007085.1_ASM200708v1	-	MD IIE-43
Burkholderia cenocepacia S2AES	1165868	PRJNA114705	114705	Proteobacteria	Betaproteobacteria	7.28395	66.8	-	AXZY01	440	7048	6479	5/12/14	3/24/17	Contig	Macquarie University	SAMN02769657	GCA_000689575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/575/GCA_000689575.1_S2AES	-	S2AES
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'	456481	PRJNA20133	20133	Spirochaetes	Spirochaetia	3.95145	38.9018	chromosome I:NC_010602.1/CP000786.1; chromosome II:NC_010843.1/CP000787.1; plasmid p74:NC_010844.1/CP000788.1	-	3	3769	3695	2/13/08	4/6/17	Complete Genome	Institut Pasteur	SAMN02603347	GCA_000017685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/685/GCA_000017685.1_ASM1768v1	18270594	Patoc 1 (Paris)
Acinetobacter baumannii ACICU	405416	PRJNA17827	17827	Proteobacteria	Gammaproteobacteria	3.99676	38.9013	chromosome:NC_010611.1/CP000863.1; plasmid pACICU1:NC_010605.1/CP000864.1; plasmid pACICU2:NC_010606.1/CP000865.1	-	3	3839	3605	4/15/08	3/15/17	Complete Genome	CNR - National Research Council	SAMN02603140	GCA_000018445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/445/GCA_000018445.1_ASM1844v1	18411315	ACICU
Bacillus pumilus BA06	1227811	PRJNA174086	174086	Terrabacteria group	Firmicutes	3.7477	41.3	-	AMDH01	15	3856	3743	9/27/12	3/30/17	Contig	Sichuan University	SAMN01178022	GCA_000299555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/555/GCA_000299555.1_BA06_V1.0	23144411	BA06
Corynebacterium glutamicum S9114	1075088	PRJNA71497	71497	Terrabacteria group	Actinobacteria	3.26289	53.9	-	AFYA01	35	3055	2932	8/23/11	3/30/17	Contig	SCUT	SAMN02471002	GCA_000224315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/315/GCA_000224315.2_ASM22431v2	21994927	S9114
Acinetobacter baumannii	470	PRJNA238628	238628	Proteobacteria	Gammaproteobacteria	3.93513	38.9005	chromosome:NZ_CP007535.2/CP007535.2; plasmid pAC29a:NZ_CP008850.1/CP008850.1; plasmid pAC29b:NZ_CP008851.1/CP008851.1	-	3	3809	3665	5/27/14	4/10/17	Complete Genome	Universiti Sultan Zainal Abidin	SAMN02714232	GCA_000695855.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/855/GCA_000695855.3_ASM69585v3	26779129	AC29
Ralstonia solanacearum	305	PRJEB7426	268814	Proteobacteria	Betaproteobacteria	5.42641	66.5	-	CDLZ01	1	5038	4502	1/5/15	4/3/17	Scaffold	CIRAD	SAMEA3137593	GCA_000825805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/805/GCA_000825805.2_UW179	-	UW179
Corynebacterium jeikeium	38289	PRJNA341407	341407	Terrabacteria group	Actinobacteria	2.44702	61.6	-	MTGK01	111	2195	2087	2/13/17	4/6/17	Scaffold	California Department of Public Health	SAMN05721786	GCA_001999385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/385/GCA_001999385.1_ASM199938v1	-	ATCC 43734
Candidatus Pelagibacter ubique	198252	PRJEB9287	287342	Proteobacteria	Alphaproteobacteria	1.0169	29.2	-	CVST01	77	1080	1012	6/17/15	4/10/17	Contig	UNIVERSITY OF CALIFORNIA - SAN DIEGO	SAMEA3368572	GCA_001180225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/225/GCA_001180225.1_CLC_assembled_contigs	-	SCGC AAA797-I19
Helicobacter pylori	210	PRJNA384245	384245	Proteobacteria	delta/epsilon subdivisions	1.57835	38.9	chromosome:CP023448.1	-	1	-	-	9/25/17	9/25/17	Complete Genome	Ichan School of Medicine at Mount Sinai	SAMN07661065	GCA_002356595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/595/GCA_002356595.1_ASM235659v1	-	HPJP26
Clostridioides difficile 70-100-2010	1002369	PRJNA65135	65135	Terrabacteria group	Firmicutes	4.00822	28.3	-	AGAC01	103	3654	3541	11/18/11	6/15/17	Scaffold	Washington University Genome Center	SAMN02299455	GCA_000235905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/905/GCA_000235905.1_ASM23590v1	-	70-100-2010
Shigella boydii	621	PRJNA288479	288479	Proteobacteria	Gammaproteobacteria	4.29249	50.8	-	LPTH01	553	4885	4062	12/15/16	2/26/17	Contig	"University of Maryland, School of Medicine"	SAMN04001699	GCA_001906045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/045/GCA_001906045.1_ASM190604v1	-	602385
Streptococcus salivarius	1304	PRJNA320256	320256	Terrabacteria group	Firmicutes	2.14919	39.8	-	LXMB01	190	2070	1865	6/7/16	4/5/17	Contig	State University of Campinas	SAMN04931506	GCA_001659655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/655/GCA_001659655.1_ASM165965v1	-	20-02 S1
Staphylococcus pettenkoferi	170573	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.50235	38.9	chromosome:NZ_CP022096.1/CP022096.1	-	1	2391	2277	6/27/17	6/29/17	Complete Genome	US Food and Drug Administration 	SAMN06173301	GCA_002208805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/805/GCA_002208805.1_ASM220880v1	-	FDAARGOS_288
Brucella abortus	235	PRJNA400357	400357	Proteobacteria	Alphaproteobacteria	3.30369	57.1707	chromosome 1:NZ_CP023225.1/CP023225.1; chromosome 2:NZ_CP023226.1/CP023226.1	-	2	3377	3019	9/12/17	9/14/17	Chromosome	IZSM-Portici	SAMN07572685	GCA_002290765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/765/GCA_002290765.1_ASM229076v1	-	69103
Yersinia pseudotuberculosis NBRC 105692	1218101	PRJDB274	172097	Proteobacteria	Gammaproteobacteria	4.50672	47.4	-	BAUR01	142	4152	3888	12/14/13	4/2/17	Contig	National Institute of Technology and Evaluation	SAMD00041801	GCA_000511675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/675/GCA_000511675.1_ASM51167v1	-	NBRC 105692
Lactobacillus delbrueckii subsp. bulgaricus	1585	PRJEB5826	240979	Terrabacteria group	Firmicutes	1.85324	49.8	-	CCET01	14	1964	1692	6/23/14	4/2/17	Scaffold	INRA-MIG	SAMEA2580764	GCA_000751635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/635/GCA_000751635.1_LBVIB27_V12	-	-
Leptospira borgpetersenii serovar Ballum	280505	PRJNA255706	255706	Spirochaetes	Spirochaetia	3.88764	40	-	JPUC01	212	3716	3407	9/25/14	4/2/17	Contig	University of Hyderabad	SAMN02928168	GCA_000758045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/045/GCA_000758045.1_ASM75804v1	-	Muis5
Acinetobacter baumannii	470	PRJNA380857	380857	Proteobacteria	Gammaproteobacteria	3.87094	38.9	chromosome:NZ_CP020598.1/CP020598.1	-	1	3734	3546	4/10/17	4/13/17	Complete Genome	Yonsei University College of medicine	SAMN06650238	GCA_002082805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/805/GCA_002082805.1_ASM208280v1	-	WKA02
Campylobacter fetus subsp. testudinum	1507806	PRJNA285171	285171	Proteobacteria	delta/epsilon subdivisions	1.79425	33.1	-	LFLK01	52	1826	1762	8/5/16	4/5/17	Contig	Utrecht University	SAMN03741804	GCA_001699215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/215/GCA_001699215.1_ASM169921v1	27333878	12S02225-3
Proteus mirabilis	584	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	4.19102	38.9	chromosome:NZ_CP020052.1/CP020052.1	-	1	3943	3766	3/21/17	3/23/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04014900	GCA_002055685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/685/GCA_002055685.1_ASM205568v1	-	AR_0059
Oenococcus oeni	1247	PRJNA253854	253854	Terrabacteria group	Firmicutes	1.83466	37.9	-	JPEM01	61	1876	1728	7/11/14	3/24/17	Contig	University of Foggia	SAMN02894449	GCA_000725035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/035/GCA_000725035.1_ASM72503v1	25342687	OT25
Streptococcus mitis	28037	PRJNA242570	242570	Terrabacteria group	Firmicutes	2.2137	39.4	-	JPFU01	27	2236	1984	7/7/14	4/2/17	Contig	Aarhus University	SAMN02836936	GCA_000722695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/695/GCA_000722695.1_ASM72269v1	25053789	SK629
Aeromonas salmonicida subsp. salmonicida	29491	PRJNA310296	310296	Proteobacteria	Gammaproteobacteria	4.74694	58.4	-	LSGY01	143	4494	4119	5/13/16	4/5/17	Contig	Universidad Mayor	SAMN04450001	GCA_001643285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/285/GCA_001643285.1_ASM164328v1	-	J231
Vibrio parahaemolyticus 970107	1238203	PRJNA176637	176637	Proteobacteria	Gammaproteobacteria	5.11119	45.3	-	AZIQ01	117	4869	4641	12/18/13	3/18/17	Scaffold	IGS	SAMN02469946	GCA_000510605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/510/605/GCA_000510605.2_vp970107	-	970107
Streptococcus thermophilus	1308	PRJNA335873	335873	Terrabacteria group	Firmicutes	1.89996	38.9	chromosome:NZ_CP016877.1/CP016877.1	-	1	2037	1676	8/16/16	4/11/17	Complete Genome	"Key Laboratory of Dairy Science, Ministry of Education"	SAMN05465222	GCA_001705585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/585/GCA_001705585.1_ASM170558v1	-	KLDS 3.1003
Coxiella burnetii Q321	360117	PRJNA18975	18975	Proteobacteria	Gammaproteobacteria	2.00458	42.7	-	AAYJ01	98	2185	1877	3/16/07	3/30/17	Contig	TIGR	SAMN02435843	GCA_000169495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/495/GCA_000169495.2_ASM16949v2	-	Q321
Lactobacillus casei Lc-10	1051655	PRJNA68485	68485	Terrabacteria group	Firmicutes	2.9514	46.4	-	AFYT01	76	3108	2785	11/2/12	3/30/17	Contig	"University of Wisconsin-Madison, Utah State University, and Danisco USA Inc."	SAMN02472012	GCA_000309765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/765/GCA_000309765.1_ASM30976v1	23035691	Lc-10
Salinispora arenicola CNH963	1288085	PRJNA187933	187933	Terrabacteria group	Actinobacteria	5.44005	69.6	-	AUKL01	105	4991	4568	7/10/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02441149	GCA_000424725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/725/GCA_000424725.1_ASM42472v1	-	CNH963
Lactobacillus helveticus	1587	PRJNA335871	335871	Terrabacteria group	Firmicutes	2.02393	36.7	-	MPSU01	93	2090	1675	12/9/16	4/6/17	Contig	Inner Mongolia Agricultural University	SAMN05465219	GCA_001895375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/375/GCA_001895375.1_ASM189537v1	-	AJT
Vibrio harveyi	669	PRJNA290379	290379	Proteobacteria	Gammaproteobacteria	5.68576	45	-	LGYS01	107	5180	5047	8/7/15	4/4/17	Contig	University of Copenhagen	SAMN03890867	GCA_001262735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/735/GCA_001262735.1_ASM126273v1	26383670	VH2
Bifidobacterium adolescentis	1680	PRJNA300965	300965	Terrabacteria group	Actinobacteria	2.08423	59.2	-	LNKJ01	8	1749	1599	4/24/17	4/26/17	Contig	University of Parma	SAMN04231316	GCA_002108135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/135/GCA_002108135.1_BadoLMG10733v1	27035119	LMG 10733
Lactobacillus fermentum	1613	PRJEB5182	277828	Terrabacteria group	Firmicutes	1.95041	52.1	-	CBZV01	73	1979	1759	3/15/15	4/4/17	Contig	VRIJE UNIVERSITEIT BRUSSEL	SAMEA3158475	GCA_001368755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/755/GCA_001368755.1_LF_newbler2.7	-	222
Helicobacter pylori	210	PRJNA245115	245115	Proteobacteria	delta/epsilon subdivisions	1.6599	38.9	chromosome:NZ_CP011484.1/CP011484.1	-	1	1638	1471	5/27/16	3/28/17	Complete Genome	Veterinary Medicine University of Vienna	SAMN02731783	GCA_001653415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/415/GCA_001653415.1_ASM165341v1	-	CC33C
Porphyromonas gingivalis	837	PRJNA386726	386726	FCB group	Bacteroidetes/Chlorobi group	2.39438	48.4	-	NHRU01	44	2132	1954	6/21/17	6/24/17	Scaffold	Chosun University	SAMN07125718	GCA_002204455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/455/GCA_002204455.1_ASM220445v1	-	KCOM 2797
Aliivibrio fischeri	668	PRJNA318805	318805	Proteobacteria	Gammaproteobacteria	4.07423	38.3	-	MAJR01	149	3785	3663	7/21/16	4/5/17	Scaffold	Massachusetts Institute of Technology	SAMN04867936	GCA_001691015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/015/GCA_001691015.1_ASM169101v1	-	5F146
Burkholderia thailandensis E555	869728	PRJNA50871	50871	Proteobacteria	Betaproteobacteria	6.14591	67.4	-	AECN01	521	6244	5436	8/16/10	5/18/17	Contig	Genome Institute of Singapore	SAMN02469819	GCA_000179515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/515/GCA_000179515.1_BTHE555_1.0	20799932	E555
Fervidobacterium pennivorans	93466	PRJNA257745	257745	Thermotogae	Thermotogae	2.06185	38.9	chromosome:NZ_CP011393.1/CP011393.1	-	1	1928	1837	5/16/16	4/12/17	Complete Genome	University of Manitoba	SAMN02954477	GCA_001644665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/665/GCA_001644665.1_ASM164466v1	-	DYC
Burkholderia multivorans	87883	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.84454	66.9	-	LPEO01	95	6504	6178	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449462	GCA_001529925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/925/GCA_001529925.1_ASM152992v1	-	MSMB1272WGS
Borrelia burgdorferi IPT35	1408864	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.18679	28.3	-	AYBN01	290	1209	656	12/3/13	4/2/17	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378831	GCA_000501375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/375/GCA_000501375.1_BorBurgIPT35	-	IPT35
Treponema pallidum subsp. pallidum	161	PRJNA322283	322283	Spirochaetes	Spirochaetia	1.13915	52.8	chromosome:NZ_CP016047.1/CP016047.1	-	1	1066	1004	8/25/16	4/5/17	Chromosome	"National Institute of Health, Portugal"	SAMN05173064	GCA_001712915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/915/GCA_001712915.1_ASM171291v1	-	PT_SIF0857
Rhizobium leguminosarum bv. trifolii CC278f	754518	PRJNA63643	63643	Proteobacteria	Alphaproteobacteria	8.72961	60.6	-	AJUI01	7	8534	7979	1/8/14	4/2/17	Scaffold	JGI	SAMN02597158	GCA_000517045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/045/GCA_000517045.1_ASM51704v1	-	CC278f
Clavibacter michiganensis subsp. michiganensis	33013	PRJNA331196	331196	Terrabacteria group	Actinobacteria	3.30815	72.5	-	MDHE01	469	3214	2813	5/19/17	6/1/17	Contig	University of California	SAMN05439585	GCA_002159015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/015/GCA_002159015.1_ASM215901v1	-	CASJ004
Brucella suis CNGB 247	1198683	PRJNA176523	176523	Proteobacteria	Alphaproteobacteria	3.3066	57.3	-	AQLA01	9	3346	3146	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN01047734	GCA_000371145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/145/GCA_000371145.1_Bruc_suis_CNGB_247_V1	-	CNGB 247
Enterococcus faecalis TX4244	749494	PRJNA47141	47141	Terrabacteria group	Firmicutes	2.92536	37.3	-	AEBH01	53	2955	2844	8/30/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189131	GCA_000147295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/295/GCA_000147295.1_ASM14729v1	-	TX4244
Bradyrhizobium japonicum	375	PRJNA283680	283680	Proteobacteria	Alphaproteobacteria	8.98388	64	-	LGUJ01	104	8656	8201	9/9/15	4/4/17	Scaffold	KyushuUniversity	SAMN03654026	GCA_001280585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/585/GCA_001280585.1_ASM128058v1	26494666	Is-1
Microcystis aeruginosa NIES-98	267869	PRJNA338219	338219	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.98373	42.4	-	MDZH01	497	4886	4422	9/13/16	4/5/17	Scaffold	National Institute for Environmental Studies	SAMN05526293	GCA_001725075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/075/GCA_001725075.1_ASM172507v1	-	NIES-98
Methanobrevibacter smithii	2173	PRJEB6664	254388	Euryarchaeota	Methanobacteria	1.71838	31.5	-	CCXV01	87	1699	1591	10/2/14	4/3/17	Contig	URMITE	SAMEA2796325	GCA_000824705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/705/GCA_000824705.1_Methanobrevibacter_smithii	-	ACE6
Streptococcus dysgalactiae subsp. equisimilis	119602	PRJNA327242	327242	Terrabacteria group	Firmicutes	2.26866	39.1	-	MCRQ01	43	2233	2052	8/13/16	4/5/17	Contig	The UT MD Anderson Cancer Center	SAMN05327344	GCA_001704515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/515/GCA_001704515.1_ASM170451v1	-	UT_4255RC
Borreliella garinii	29519	PRJNA243977	243977	Spirochaetes	Spirochaetia	1.17674	27.8	-	JJNU01	7	1139	996	6/27/14	4/2/17	Contig	"Korea National Institute of Health, Korea Centers for Disease Control & Prevention"	SAMN02725527	GCA_000714705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/705/GCA_000714705.1_935T	25540341	935
Streptococcus mutans TCI-152	1074128	PRJNA72007	72007	Terrabacteria group	Firmicutes	1.8514	36.9	-	AGKT01	101	1867	1760	10/6/11	3/22/17	Contig	JCVI	SAMN02436602	GCA_000229045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/045/GCA_000229045.2_SMUT4-NEX_57-152	-	TCI-152
Neisseria gonorrhoeae PID24-1	528357	PRJNA32801	32801	Proteobacteria	Betaproteobacteria	2.12557	52.5	-	ABZN01	54	2353	2084	12/15/08	4/11/17	Scaffold	Broad Institute	SAMN02595245	GCA_000156915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/915/GCA_000156915.1_ASM15691v1	-	PID24-1
Acinetobacter baumannii	470	PRJNA290306	290306	Proteobacteria	Gammaproteobacteria	4.17261	38.9	chromosome:NZ_CP014528.1/CP014528.1	-	1	4038	3853	3/1/16	3/19/17	Complete Genome	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN03890256	GCA_001578145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/145/GCA_001578145.1_ASM157814v1	-	XH858
Chlamydia psittaci 02DC23	1112259	PRJNA77091	77091	PVC group	Chlamydiae	1.2066	39.2	-	ATKV01	41	1076	1010	6/25/13	4/1/17	Scaffold	University of Maryland School of Medicine	SAMN00860209	GCA_000415645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/645/GCA_000415645.1_ASM41564v1	-	02DC23
Bifidobacterium animalis subsp. lactis	302911	PRJNA348834	348834	Terrabacteria group	Actinobacteria	1.92329	60.5	-	MLZL01	21	1660	1533	12/8/16	4/6/17	Contig	University of Parma	SAMN05916063	GCA_001892925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/925/GCA_001892925.1_ASM189292v1	-	646
Bacillus amyloliquefaciens DC-12	1198291	PRJNA167020	167020	Terrabacteria group	Firmicutes	4.01656	46.1	-	AMQI01	18	4078	3889	10/9/12	4/10/17	Scaffold	School of Bioscience and Bioengineering， South China University of Technology，Guangzhou	SAMN02471000	GCA_000330805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/805/GCA_000330805.1_ASM33080v1	-	DC-12
Stenotrophomonas maltophilia stmalt0435	1347913	PRJEB3963	215666	Proteobacteria	Gammaproteobacteria	4.71082	66.4	-	CBQU01	219	4480	4213	8/16/13	3/24/17	Contig	IUK	SAMEA2272536	GCA_000455625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/625/GCA_000455625.1_Stmalt0435	-	stmalt0435
Comamonas testosteroni ZNC0007	1339241	PRJNA205594	205594	Proteobacteria	Betaproteobacteria	5.92449	61.3	-	JRQK01	161	5563	5347	12/16/14	4/2/17	Scaffold	University of Oregon	SAMN03021515	GCA_000801735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/735/GCA_000801735.1_ZNC0007.1	-	ZNC0007
Bacillus mycoides	1405	PRJNA298676	298676	Terrabacteria group	Firmicutes	6.07784	35.1	-	LLWA01	236	6480	5977	1/5/16	4/5/17	Scaffold	University of Groningen	SAMN04161523	GCA_001484805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/805/GCA_001484805.1_M2E_15	26950325	M2E_15
Yersinia frederiksenii	29484	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.94628	47.6	-	CGBN01	27	4598	4394	3/15/15	4/4/17	Scaffold	SC	SAMEA859853	GCA_001319525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/525/GCA_001319525.1_4840_7_4	-	IP23047
Bifidobacterium bifidum LMG 13195	1207542	PRJNA263318	263318	Terrabacteria group	Actinobacteria	2.31018	62.6	-	JSEA01	34	2008	1772	6/5/15	4/3/17	Contig	University of Parma	SAMN03103720	GCA_001020415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/415/GCA_001020415.1_Bbif09v4	25523018	LMG 13195
Alteromonas macleodii	28108	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.36644	44.7	-	DCQJ01	68	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457321	GCA_002323435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/435/GCA_002323435.1_ASM232343v1	28894102	-
Micrococcus luteus	1270	PRJNA271214	271214	Terrabacteria group	Actinobacteria	4.01742	43.3	-	JXAR01	112	-	-	1/6/15	1/6/15	Contig	Directorate of Groundnut Research (Indian Council of Agricultural Research)	SAMN03273307	GCA_000815405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/405/GCA_000815405.1_ASM81540v1	-	SEN31
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12581	41.2	-	CWCM01	76	2054	1873	6/23/15	3/26/17	Contig	SC	SAMEA1032760	GCA_001175205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/205/GCA_001175205.1_6903_6_11	-	EQUI0156
Haemophilus parasuis 29755	456298	PRJEB4161	215216	Proteobacteria	Gammaproteobacteria	2.26379	39.8	-	CBTX01	281	2291	2087	8/14/14	4/2/17	Contig	DEPT.VET.MEDICINE	SAMEA3139104	GCA_000751055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/055/GCA_000751055.1_SVR5	-	29755
Pasteurella multocida subsp. multocida str. P52VAC	1077143	PRJNA72159	72159	Proteobacteria	Gammaproteobacteria	2.27337	40.4	-	ALBZ01	209	2198	1986	8/17/12	8/8/17	Contig	Anand Agricultural University	SAMN02469638	GCA_000291605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/605/GCA_000291605.1_ASM29160v1	-	P52VAC
Lactobacillus rhamnosus DSM 20021 = JCM 1136 = NBRC 3425	1423797	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.9491	46.7	-	AZCQ01	38	2962	2781	11/6/15	4/4/17	Scaffold	Shanghai Majorbio	SAMN02369512	GCA_001435405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/405/GCA_001435405.1_ASM143540v1	26415554	DSM 20021
Vibrio splendidus 1F-157	617145	PRJNA167016	167016	Proteobacteria	Gammaproteobacteria	5.59042	44	-	AJZJ02	603	5076	4657	6/25/12	4/5/17	Scaffold	Broad Institute	SAMN02470444	GCA_000272345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/345/GCA_000272345.2_ASM27234v2	22955834	1F-157
Anaerotignum propionicum DSM 1682	991789	PRJNA63245	63245	Terrabacteria group	Firmicutes	3.12042	38.9	chromosome:NZ_CP014223.1/CP014223.1	-	1	2989	2850	2/16/16	4/11/17	Complete Genome	Georg-August-University Goettingen	SAMN04437875	GCA_001561955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/955/GCA_001561955.1_ASM156195v1	27081148	X2
Clostridium sporogenes	1509	PRJNA353866	353866	Terrabacteria group	Firmicutes	4.14208	28	-	MWJJ01	27	3894	3689	4/21/17	7/29/17	Contig	Northern Arizona University	SAMN06022751	GCA_002104055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/055/GCA_002104055.1_ASM210405v1	28733282	CLS_DGF_0088_06
Enterococcus casseliflavus	37734	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.12192	42.9	-	DGLV01	107	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451044	GCA_002388095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/095/GCA_002388095.1_ASM238809v1	28894102	-
Helicobacter typhlonius	76936	PRJEB10402	299143	Proteobacteria	delta/epsilon subdivisions	1.92083	38.9	chromosome I:NZ_LN907858.1/LN907858.1	-	1	1916	1792	11/19/15	4/11/17	Complete Genome	LEIDEN UNIVERSITY MEDICAL CENTER	SAMEA3507300	GCA_001460635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/460/635/GCA_001460635.1_htyphlonius_mit97-6810	-	-
Bordetella bronchiseptica E014	1458262	PRJNA237087	237087	Proteobacteria	Betaproteobacteria	5.20714	68.3	-	JGWZ01	112	5029	4758	5/12/14	4/4/17	Contig	JCVI	SAMN02614583	GCA_000689735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/735/GCA_000689735.2_gbb65v01	25908122	E014
Sinorhizobium meliloti WSM4191	935563	PRJNA74467	74467	Proteobacteria	Alphaproteobacteria	7.22757	61	-	ATYC01	6	7104	6497	7/15/13	4/2/17	Scaffold	JGI	SAMN02440593	GCA_000427485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/485/GCA_000427485.1_ASM42748v1	-	WSM4191
Corynebacterium diphtheriae bv. gravis str. ISS 4060	1450521	PRJNA235382	235382	Terrabacteria group	Actinobacteria	2.39566	53.6	-	JAQN01	47	2297	2111	6/5/15	4/3/17	Contig	"Northumbria University, Newcastle"	SAMN02837548	GCA_001026805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/805/GCA_001026805.1_ASM102680v1	26452736	ISS 4060
[Haemophilus] ducreyi	730	PRJNA270894	270894	Proteobacteria	Gammaproteobacteria	1.70256	38.7	chromosome:CP011224.1	-	1	1671	1491	6/30/15	7/23/15	Chromosome	Indiana University School of Medicine	SAMN03271824	GCA_001043355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/355/GCA_001043355.1_ASM104335v1	-	GU3
Streptococcus gordonii	1302	PRJNA280668	280668	Terrabacteria group	Firmicutes	2.30824	40.2	-	LBCT01	382	2142	2032	3/11/16	4/10/17	Contig	University of Malaya	SAMN03481560	GCA_001589135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/589/135/GCA_001589135.1_ASM158913v1	-	FSS3
Lactobacillus reuteri	1598	PRJNA276785	276785	Terrabacteria group	Firmicutes	1.99397	38.9	chromosome:NZ_CP011024.1/CP011024.1	-	1	2024	1890	7/6/15	4/3/17	Complete Genome	Institute for Basic Science (IBS) and Pohang University of Science and Technology (POSTECH)	SAMN03382532	GCA_001046835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/835/GCA_001046835.1_ASM104683v1	-	IRT
"Yersinia enterocolitica (type O:5,27) str. YE149/02"	1262465	PRJEB664	194500	Proteobacteria	Gammaproteobacteria	4.59692	47	-	CAQF01	1	4309	4062	4/30/13	3/26/17	Scaffold	WTSI	SAMEA3146304	GCA_001050775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/775/GCA_001050775.1_ASM105077v1	-	YE149/02
Lactobacillus gasseri 224-1	679196	PRJNA40683	40683	Terrabacteria group	Firmicutes	2.00552	35	-	ADFT01	37	2354	2252	12/30/09	9/20/13	Contig	JCVI	SAMN00009758	GCA_000177415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/415/GCA_000177415.1_ASM17741v1	-	224-1
Helicobacter pylori	210	PRJDB3430	277824	Proteobacteria	delta/epsilon subdivisions	1.56212	38.9	chromosome Unknown:AP014711.1	-	1	-	-	3/7/15	6/4/15	Complete Genome	National Health Research Institutes	SAMD00024432	GCA_001549855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/855/GCA_001549855.1_ASM154985v1	-	ML2
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.08122	41.6	-	JJQS01	155	3517	3304	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708938	GCA_000979255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/255/GCA_000979255.1_gtlEnvA5udCFS	25756680	1.H.M.1A.2
Anaplasma phagocytophilum	948	PRJEB13033	321622	Proteobacteria	Alphaproteobacteria	1.58518	42.1	-	FLME02	300	1337	1080	6/2/16	4/5/17	Contig	INRA-MIG	SAMEA4018768	GCA_900088645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/645/GCA_900088645.2_ANAPRD1_2	-	RD1
Leuconostoc mesenteroides subsp. cremoris	33965	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.62909	38.1	-	MPAT01	105	1758	1403	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981471	GCA_002092105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/105/GCA_002092105.1_ASM209210v1	28217118	LMGCF09
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.15771	39.9	-	FQTA01	2	1054	961	5/10/17	5/24/17	Contig	WTSI	SAMEA1094361	GCA_900118965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/965/GCA_900118965.1_7067_6_83	-	10DC90
Bartonella henselae	38323	PRJNA295147	295147	Proteobacteria	Alphaproteobacteria	1.81218	38	-	LOAH01	56	1633	1413	1/4/17	4/10/17	Contig	Anses UMR BIPAR	SAMN04286634	GCA_001932295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/295/GCA_001932295.1_ASM193229v1	-	U4
Serratia marcescens	615	PRJNA371353	371353	Proteobacteria	Gammaproteobacteria	5.21558	59.8	chromosome:NZ_CP019927.1/CP019927.2	-	1	4979	4285	2/28/17	4/18/17	Chromosome	UFBA	SAMN06297994	GCA_002007925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/925/GCA_002007925.2_ASM200792v2	-	1274
Helicobacter pylori 26695-1	1391726	PRJNA270700	270700	Proteobacteria	delta/epsilon subdivisions	1.66764	38.9	chromosome:NZ_CP010435.1/CP010435.1	-	1	1644	1510	1/21/15	3/25/17	Complete Genome	Oita University	SAMN03268385	GCA_000826985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/985/GCA_000826985.1_ASM82698v1	25645832	26695-1
Mannheimia haemolytica MhBrain2012	1329902	PRJNA200976	200976	Proteobacteria	Gammaproteobacteria	2.7272	41.1	-	ATSZ01	32	2829	2616	8/2/13	4/1/17	Contig	National Animal Disease Center	SAMN02116558	GCA_000443225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/225/GCA_000443225.1_MhBrainv2	-	MhBrain2012
Lactobacillus brevis	1580	PRJNA339712	339712	Terrabacteria group	Firmicutes	2.88468	45.2	-	MDUA01	11	2969	2758	9/8/16	4/5/17	Contig	University College Cork	SAMN05603676	GCA_001722065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/065/GCA_001722065.1_ASM172206v1	-	DPC 6108
Campylobacter coli RM2228	306254	PRJNA12516	12516	Proteobacteria	delta/epsilon subdivisions	1.86067	31.1	-	AAFL01	38	1965	1801	1/4/05	3/15/17	Scaffold	TIGR	SAMN02435832	GCA_000167415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/415/GCA_000167415.1_ASM16741v1	15660156	RM2228
Burkholderia sp. JPY347	667632	PRJNA169697	169697	Proteobacteria	Betaproteobacteria	6.38738	63.1	-	ARDB01	57	5863	5608	4/19/13	5/18/17	Scaffold	DOE Joint Genome Institute	SAMN02441378	GCA_000373005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/005/GCA_000373005.1_ASM37300v1	-	JPY347
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.52099	67.3	-	LOXB01	88	5906	5636	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449252	GCA_001524235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/235/GCA_001524235.1_ASM152423v1	-	FL-7-4-10-S1-D0
Propionibacterium acnes HL005PA4	765099	PRJNA49231	49231	Terrabacteria group	Actinobacteria	2.47011	60	-	ADZW01	16	2482	2364	7/28/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189197	GCA_000144065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/065/GCA_000144065.1_ASM14406v1	-	HL005PA4
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.51814	32.7	-	CUGQ01	83	2514	2377	3/31/15	3/26/17	Contig	SC	SAMEA1035061	GCA_001226325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/325/GCA_001226325.1_7068_7_48	-	114126
Mycoplasma bovis	28903	PRJNA306895	306895	Terrabacteria group	Tenericutes	0.937079	29.3	-	LQDX01	70	804	733	1/4/17	4/6/17	Contig	"University of California, Davis"	SAMN04366519	GCA_001930315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/315/GCA_001930315.1_ASM193031v1	-	2403MB
Proteus mirabilis	584	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.04399	38.8	-	JTBB01	3	3772	3419	11/14/14	7/6/17	Contig	US Food and Drug Administration 	SAMN02934535	GCA_000783595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/595/GCA_000783595.1_ASM78359v1	-	FDAARGOS_80
Helicobacter pylori	210	PRJNA270699	270699	Proteobacteria	delta/epsilon subdivisions	1.6673	38.9	chromosome:NZ_CP010436.1/CP010436.1	-	1	1645	1510	1/21/15	3/25/17	Complete Genome	Oita University	SAMN03268365	GCA_000827025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/827/025/GCA_000827025.1_ASM82702v1	25767223	26695-1MET
Cronobacter sakazakii	28141	PRJNA251869	251869	Proteobacteria	Gammaproteobacteria	4.55293	56.8	-	JOLU01	80	4455	4195	10/9/15	4/4/17	Scaffold	"Nottingham Trent University, UK"	SAMN02840978	GCA_001309305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/305/GCA_001309305.1_ASM130930v1	26438044	714
Klebsiella oxytoca 10-5248	883123	PRJNA52149	52149	Proteobacteria	Gammaproteobacteria	6.0298	55	-	AKCF01	4	5860	5558	6/15/12	5/18/17	Contig	Broad Institute	SAMN02463897	GCA_000269585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/585/GCA_000269585.1_PB_Kleb_oxyt_10-5248_V1	22829535	Oct-48
Lactobacillus salivarius	1624	PRJNA321782	321782	Terrabacteria group	Firmicutes	2.26601	32.8	-	LXZQ01	111	2328	2159	9/12/17	9/14/17	Contig	Seoul National University	SAMN05003794	GCA_002289625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/625/GCA_002289625.1_ASM228962v1	-	KLA004
Moraxella catarrhalis	480	PRJNA297370	297370	Proteobacteria	Gammaproteobacteria	1.94022	41.7	-	LXHP01	40	1829	1684	6/3/16	4/5/17	Contig	Drexel University College of Medicine	SAMN04122795	GCA_001656195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/195/GCA_001656195.1_ASM165619v1	26912404	F24
Streptococcus anginosus	1328	PRJNA243855	243855	Terrabacteria group	Firmicutes	2.03635	38.9	chromosome:NZ_CP007573.1/CP007573.1	-	1	1992	1831	8/21/14	4/3/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05771128	GCA_000831165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/165/GCA_000831165.1_ASM83116v1	25053786	SA1
Bifidobacterium breve MCC 1128	1365965	PRJNA215982	215982	Terrabacteria group	Actinobacteria	2.48022	58.9	-	AVQD01	25	2248	2045	8/11/15	4/3/17	Contig	"Food Science and Technology Institute, Morinaga Milk Industry Co., Ltd"	SAMN03978799	GCA_001263915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/915/GCA_001263915.1_ASM126391v1	26236711	MCC 1128
Bacillus weihenstephanensis	86662	PRJEB14962	336312	Terrabacteria group	Firmicutes	5.39501	35.3	-	FMAK01	92	5744	5345	10/5/16	6/16/17	Scaffold	INRA-MIG	SAMEA4361425	GCA_900094655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/655/GCA_900094655.1_ASM90009465v1	-	SDA_GO95
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.22064	36.7	-	LPRQ01	10	2325	2201	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305151	GCA_001560215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/215/GCA_001560215.1_GG12_C01_17	-	GG12-C01-17
Streptococcus sanguinis	1305	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.35743	43.1	-	JVPQ01	68	2336	2244	7/10/15	4/3/17	Contig	University of Washington	SAMN03197408	GCA_001071805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/805/GCA_001071805.1_ASM107180v1	26230489	216_SSAN
Staphylococcus saprophyticus	29385	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.57004	33	-	LMYY01	33	2527	2351	9/28/16	4/5/17	Scaffold	Tufts University	SAMN04244240	GCA_001747165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/165/GCA_001747165.1_ASM174716v1	-	9556
Vibrio sp. RC341	675810	PRJNA40499	40499	Proteobacteria	Gammaproteobacteria	4.0087	46.9	-	ACZT01	28	3792	3549	10/8/09	4/17/17	Contig	"Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR)"	SAMN02393823	GCA_000176215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/215/GCA_000176215.1_ASM17621v1	-	RC341
Bacillus coagulans DSM 1 = ATCC 7050	1121088	PRJEB18146	355480	Terrabacteria group	Firmicutes	2.95252	47.3	-	FQUB01	143	3145	2827	12/2/16	4/6/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745208	GCA_900128875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/875/GCA_900128875.1_IMG-taxon_2582581263_annotated_assembly	-	DSM 1
Paenibacillus polymyxa	1406	PRJNA323402	323402	Terrabacteria group	Firmicutes	5.3078	45.5	-	LZCE01	75	4931	4621	6/16/16	4/5/17	Contig	CSIR- National Environmental Engineering Research Institute	SAMN05178639	GCA_001663585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/585/GCA_001663585.1_ASM166358v1	-	ND24
Pseudomonas stutzeri	316	PRJNA261322	261322	Proteobacteria	Gammaproteobacteria	4.87896	62.6	-	JXXD01	398	4748	4418	3/2/15	4/3/17	Contig	Technical University of Denmark	SAMN03072113	GCA_000935215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/215/GCA_000935215.1_ASM93521v1	26152586	BAL361
Aeromonas hydrophila 277	1268080	PRJNA183202	183202	Proteobacteria	Gammaproteobacteria	4.7901	61.6	-	AOBQ01	41	4458	4304	4/6/13	5/18/17	Contig	University of Malaya	SAMN02471843	GCA_000354715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/715/GCA_000354715.1_de_novo_assembly	-	277
Propionibacterium freudenreichii	1744	PRJEB6436	270200	Terrabacteria group	Actinobacteria	2.58912	67.3	-	CCYX01	45	2305	2184	12/11/14	4/4/17	Scaffold	INRA STLO	SAMEA2822506	GCA_900000115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/000/115/GCA_900000115.1_CIRM-BIA139	-	ITG P23
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.55168	67.2	-	LOVA01	85	6917	6594	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449190	GCA_001523205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/205/GCA_001523205.1_ASM152320v1	-	MSMB1138
Flavobacterium psychrophilum	96345	PRJNA335396	335396	FCB group	Bacteroidetes/Chlorobi group	2.90546	32.4	-	MIJW01	101	2704	2536	11/28/16	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05504825	GCA_001887135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/135/GCA_001887135.1_ASM188713v1	-	FPG87
Lactobacillus johnsonii	33959	PRJNA384810	384810	Terrabacteria group	Firmicutes	1.94504	34.3	-	NGOI01	73	1853	1735	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848422	GCA_002253285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/285/GCA_002253285.1_ASM225328v1	-	117a
Escherichia albertii	208962	PRJDB3047	301492	Proteobacteria	Gammaproteobacteria	4.76042	49.5	-	BBVS01	100	4869	4423	11/6/15	2/25/17	Scaffold	University of Miyazaki	SAMD00026630	GCA_001514845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/845/GCA_001514845.1_ASM151484v1	26537224	CB9791
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.72425	47.6	-	MEBU01	69	3454	3300	11/18/16	4/5/17	Contig	The University of Queensland	SAMN05200561	GCA_001882995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/995/GCA_001882995.1_ASM188299v1	-	AHL5
Streptococcus equinus	1335	PRJEB16828	350980	Terrabacteria group	Firmicutes	1.82062	37.2	-	FNZW01	11	1782	1728	10/29/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487838	GCA_900109395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/395/GCA_900109395.1_IMG-taxon_2608642181_annotated_assembly	-	pR-5
Pectobacterium carotovorum subsp. brasiliensis ICMP 19477	1076137	PRJNA72121	72121	Proteobacteria	Gammaproteobacteria	4.97905	52.1	-	ALIU01	35	4473	4298	6/24/15	4/3/17	Contig	The New Zealand Institute for Plant & Food Research	SAMN03780057	GCA_001038675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/675/GCA_001038675.1_ASM103867v1	26251497	ICMP 19477
Helicobacter pylori J166	102611	PRJNA245313	245313	Proteobacteria	delta/epsilon subdivisions	1.65056	38.9	chromosome:NZ_CP007603.1/CP007603.1	-	1	1608	1459	5/8/14	3/24/17	Complete Genome	Penn State University	SAMN02736817	GCA_000685625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/625/GCA_000685625.1_ASM68562v1	24924186	J166
Brachyspira hyodysenteriae	159	PRJNA272555	272555	Spirochaetes	Spirochaetia	3.08216	27	-	JXNO01	94	2737	2612	5/26/15	4/3/17	Scaffold	Murdoch University	SAMN03285457	GCA_001013235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/013/235/GCA_001013235.1_ASM101323v1	26098837	ST195
Lactobacillus crispatus	47770	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.01387	36.9	-	LYQV01	50	2045	1861	7/14/17	7/17/17	Contig	University of Minnesota	SAMN04498977	GCA_002218765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/765/GCA_002218765.1_ASM221876v1	-	UMNLC5
Aggregatibacter actinomycetemcomitans	714	PRJNA270148	270148	Proteobacteria	Gammaproteobacteria	2.29182	44.2	-	NPOT01	7	2300	2075	8/23/17	8/25/17	Contig	Chosun University	SAMN03263581	GCA_002266485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/485/GCA_002266485.1_ASM226648v1	-	KCOM 1299
Gardnerella vaginalis	2702	PRJNA272108	272108	Terrabacteria group	Actinobacteria	1.48915	43.3	-	LRQA01	25	1242	1129	2/2/16	4/4/17	Scaffold	The Genome Institute at Washington University	SAMN03851015	GCA_001546455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/455/GCA_001546455.1_ASM154645v1	-	GED7760B
Lactobacillus paracasei subsp. paracasei Lpp17	1256220	PRJNA178449	178449	Terrabacteria group	Firmicutes	2.95467	46.4	-	ANMH01	131	3075	2837	6/11/13	4/1/17	Contig	Danone Research	SAMN02469707	GCA_000410135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/135/GCA_000410135.1_Lpp17.v.1	23894338	Lpp17
Staphylococcus hominis	1290	PRJEB10568	374816	Terrabacteria group	Firmicutes	2.32417	31.5	-	FBVO01	5	2317	2132	2/12/17	2/23/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA3515759	GCA_900006675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/006/675/GCA_900006675.1_J31_HGAP2	-	-
Staphylococcus capitis	29388	PRJNA311173	311173	Terrabacteria group	Firmicutes	2.46331	32.8	-	LSKZ01	46	2394	2295	5/25/16	4/5/17	Contig	Nofima	SAMN04479465	GCA_001651285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/285/GCA_001651285.1_ASM165128v1	27375578	MF1871
Acinetobacter radioresistens	40216	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.49206	42	-	DGIO01	254	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455123	GCA_002387345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/345/GCA_002387345.1_ASM238734v1	28894102	-
Rhodococcus hoagii	43767	PRJNA316970	316970	Terrabacteria group	Actinobacteria	5.33441	68.7	-	LWTY01	31	4932	4815	4/17/17	6/6/17	Contig	The University of Edinburgh	SAMN04880540	GCA_002094445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/445/GCA_002094445.1_ASM209444v1	27638249	PAM2012
Bacillus atrophaeus	1452	PRJDB4684	316423	Terrabacteria group	Firmicutes	4.12008	43.3	-	BDDH01	10	4111	3871	4/28/16	4/5/17	Scaffold	incheon national university	SAMD00050901	GCA_001639965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/965/GCA_001639965.1_ASM163996v1	-	DJHJ8
Klebsiella variicola	244366	PRJNA288761	288761	Proteobacteria	Gammaproteobacteria	5.78318	57.4	-	LFYK01	147	5793	5493	7/28/15	2/21/17	Contig	Memorial University of Newfoundland	SAMN03840627	GCA_001187805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/805/GCA_001187805.1_ASM118780v1	26358587	NL49
Acinetobacter nosocomialis	106654	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.04671	38.7	-	NGCP01	130	4005	3762	5/15/17	5/23/17	Contig	JCVI	SAMN06837785	GCA_002137015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/015/GCA_002137015.1_ASM213701v1	-	PR362
Streptococcus oralis SK304	1161421	PRJNA89615	89615	Terrabacteria group	Firmicutes	2.02059	40.7	-	ALJN01	25	2045	1931	8/13/12	3/30/17	Contig	JCVI	SAMN00829137	GCA_000287715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/715/GCA_000287715.1_SoralisSK304v1.0	-	SK304
Achromobacter xylosoxidans	85698	PRJNA319130	319130	Proteobacteria	Betaproteobacteria	7.03526	64.7	-	LYQL01	1489	6153	5927	8/18/16	4/5/17	Contig	University of Florida	SAMN04961125	GCA_001707475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/475/GCA_001707475.1_ASM170747v1	-	KCJK1727
Pseudomonas syringae pv. maculicola str. M6	698750	PRJNA286820	286820	Proteobacteria	Gammaproteobacteria	5.92351	58.5	-	LGLC01	594	5612	5136	9/18/15	4/4/17	Contig	University of Toronto	SAMN03837765	GCA_001294165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/165/GCA_001294165.1_PmaM6	-	M6
Pseudomonas savastanoi pv. glycinea	318	PRJNA284853	284853	Proteobacteria	Gammaproteobacteria	6.17315	57.6	-	LGLO01	127	5693	5175	9/18/15	4/4/17	Scaffold	University of Toronto	SAMN03837779	GCA_001294265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/265/GCA_001294265.1_Pseudomonas_syringae_pv._glycinea_BR1	-	BR1
Pseudoalteromonas sp. '520P1 No. 412'	304208	PRJDB1722	244140	Proteobacteria	Gammaproteobacteria	5.25427	35	-	BBIN01	299	4767	4431	7/5/14	4/17/17	Contig	Kochi University of Technology	SAMD00018367	GCA_000724565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/565/GCA_000724565.1_ASM72456v1	25540353	520P1 No. 412
Vibrio alginolyticus	663	PRJNA295760	295760	Proteobacteria	Gammaproteobacteria	5.42007	44.5	-	LJTE01	281	5154	4873	10/5/15	4/4/17	Contig	UC Davis	SAMN04088202	GCA_001306785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/785/GCA_001306785.1_ASM130678v1	-	UCD-30C
Helicobacter pylori	210	PRJNA245316	245316	Proteobacteria	delta/epsilon subdivisions	1.65906	38.9	chromosome:NZ_CP007605.1/CP007605.1	-	1	1661	1492	5/8/14	3/24/17	Complete Genome	Penn State University	SAMN02736818	GCA_000685705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/705/GCA_000685705.1_ASM68570v1	24924186	BM012B
Enterobacter asburiae	61645	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.96262	55.4	-	JVLF01	163	4889	4685	7/10/15	4/3/17	Contig	University of Washington	SAMN03197523	GCA_001054905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/905/GCA_001054905.1_ASM105490v1	26230489	333_ECLO
Brucella sp. CMUL 018	1906857	PRJNA345558	345558	Proteobacteria	Alphaproteobacteria	3.29969	57.3	-	MKXK01	67	3374	3136	10/14/16	4/13/17	Contig	LAU	SAMN05869294	GCA_001766475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/475/GCA_001766475.1_ASM176647v1	-	CMUL 018
Pseudomonas amygdali	47877	PRJNA274666	274666	Proteobacteria	Gammaproteobacteria	5.71925	58.3	-	JYHB01	343	5399	4743	3/2/15	4/3/17	Contig	INRA	SAMN03328995	GCA_000935645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/645/GCA_000935645.1_PSAVPseNe107-G1	25931602	CFBP 3205
Xanthomonas euvesicatoria	456327	PRJNA275489	275489	Proteobacteria	Gammaproteobacteria	5.09493	64.7	-	JZLQ01	196	4530	4136	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03349323	GCA_001008805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/805/GCA_001008805.1_v1	26089818	329
Acinetobacter pittii	48296	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	4.21628	38.5	-	BBUA01	103	4078	3877	2/20/15	4/3/17	Contig	National Institute of Technology and Evaluation	SAMD00020353	GCA_000949795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/795/GCA_000949795.1_ASM94979v1	-	NBRC 110509
Riemerella anatipestifer	34085	PRJNA309003	309003	FCB group	Bacteroidetes/Chlorobi group	2.0982	35	-	LUDN01	36	1967	1901	6/20/16	4/5/17	Contig	Sichuan Agricultural University	SAMN04419309	GCA_001670805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/670/805/GCA_001670805.1_RCAD0147	-	RCAD0147
Streptococcus anginosus DORA_7	1403946	PRJNA221494	221494	Terrabacteria group	Firmicutes	2.1071	38.7	-	AZMF01	138	2246	2246	12/16/13	12/16/13	Contig	"University of California, Berkeley"	SAMN02316559	GCA_000508545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/545/GCA_000508545.1_Str_DORA_7_velvet_1.1	-	-
Pantoea ananatis	553	PRJEA68179	68179	Proteobacteria	Gammaproteobacteria	5.10556	53.5	-	CAEI01	169	4787	4622	8/19/11	5/19/17	Scaffold	Chonnam National University	SAMEA2272456	GCA_000285475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/475/GCA_000285475.1_ASM28547v1	-	B1-9
Leptospira santarosai	28183	PRJNA257150	257150	Spirochaetes	Spirochaetia	3.95612	41.8	-	JQRJ01	335	3925	3550	2/24/16	4/5/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947900	GCA_001568365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/365/GCA_001568365.1_ASM156836v1	26833181	56198
Citrobacter freundii	546	PRJNA252011	252011	Proteobacteria	Gammaproteobacteria	5.34997	51.5	-	JRTB01	116	5393	5061	10/26/15	4/4/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872772	GCA_001413115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/115/GCA_001413115.1_ASM141311v1	25501822	RU2 LB32
Fusobacterium necrophorum subsp. funduliforme	143387	PRJNA315619	315619	Fusobacteria	Fusobacteriia	2.13932	35.2	-	LVEZ01	51	2078	1985	3/25/16	4/5/17	Contig	Aarhus University	SAMN04570267	GCA_001597475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/475/GCA_001597475.1_ASM159747v1	-	F1309
Streptococcus parasanguinis	1318	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.09203	42.1	-	JVLU01	109	2015	1935	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197508	GCA_001072295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/295/GCA_001072295.1_ASM107229v1	26230489	318_SPAR
Agrobacterium sp. 13-626	1841652	PRJNA319063	319063	Proteobacteria	Alphaproteobacteria	6.96079	60	-	LXKM01	56	6596	6397	7/22/16	4/13/17	Scaffold	Oregon State University	SAMN04901293	GCA_001692285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/285/GCA_001692285.1_ASM169228v1	27547538	13-626
Haemophilus parainfluenzae	729	PRJNA327273	327273	Proteobacteria	Gammaproteobacteria	1.97806	39.4	-	MPJK01	21	1969	1855	1/12/17	4/6/17	Scaffold	Menzies School of Health Research	SAMN06013565	GCA_001949885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/885/GCA_001949885.1_ASM194988v1	-	65114 B Hi-3
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.71867	55.4	-	JUHY01	73	4540	4365	12/16/14	3/25/17	Contig	JCVI	SAMN03012834	GCA_000802685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/685/GCA_000802685.1_SPADES_assembly_of_Enterobacter_cloacae_ND15	-	ND15
Vibrio anguillarum	55601	PRJNA267077	267077	Proteobacteria	Gammaproteobacteria	4.17176	44.7136	chromosome I:CP010042.1; chromosome II:CP010043.1	-	2	3598	3461	2/7/17	2/7/17	Chromosome	University of Copenhagen	SAMN03177577	GCA_001989855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/855/GCA_001989855.1_ASM198985v1	-	51/82/2
Kingella kingae KK156	1305594	PRJEB1618	194511	Proteobacteria	Betaproteobacteria	1.99136	46.8	-	CBSJ01	1	2015	1794	9/11/13	4/2/17	Scaffold	URMITE	SAMEA2272055	GCA_000470275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/275/GCA_000470275.1_KK156	-	KK156
Streptococcus pseudopneumoniae	257758	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.15959	40	-	JVNG01	66	2182	2019	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197470	GCA_001070805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/805/GCA_001070805.1_ASM107080v1	26230489	277_SPSE
Xanthomonas perforans	442694	PRJNA276639	276639	Proteobacteria	Gammaproteobacteria	5.13817	64.9	-	JZVN01	132	4726	4329	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03379376	GCA_001009795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/795/GCA_001009795.1_v1	26089818	GEV904
Streptobacillus moniliformis	34105	PRJNA319313	319313	Fusobacteria	Fusobacteriia	1.89102	28.8	-	LYRU01	962	1617	1468	6/23/16	4/5/17	Scaffold	Robert Koch Institute	SAMN05172959	GCA_001675725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/725/GCA_001675725.1_ASM167572v1	-	NCTC_10773
Klebsiella aerogenes	548	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.05624	55.1	-	LESX01	5	4959	4720	6/19/15	4/6/17	Scaffold	Broad Institute	SAMN03280173	GCA_001030185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/185/GCA_001030185.1_Ente_aero_UCI97_V1	-	UCI97
Leuconostoc pseudomesenteroides	33968	PRJNA352459	352459	Terrabacteria group	Firmicutes	2.07199	39	-	MPHU01	222	2228	1882	3/27/17	4/17/17	Scaffold	Norwegian University of Life Sciences	SAMN05981490	GCA_002072575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/575/GCA_002072575.1_ASM207257v1	28217118	LMGH284
Aeromonas veronii	654	PRJNA296464	296464	Proteobacteria	Gammaproteobacteria	4.67829	58.6	-	LKKH01	54	4347	4120	11/19/15	4/4/17	Contig	Texas Tech University	SAMN04099668	GCA_001446875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/875/GCA_001446875.1_ASM144687v1	26824353	TTU2014-143ASC
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.95952	64.1	-	FSAX01	22	4919	4775	12/14/16	3/21/17	Contig	SC	SAMEA2071365	GCA_900131745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/745/GCA_900131745.1_10665_4_31	-	286
Gallibacterium anatis	750	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.53061	39.9	-	JTJN01	111	2398	2259	7/2/16	4/5/17	Contig	University of Copenhagen	SAMN03220399	GCA_001678465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/465/GCA_001678465.1_Gal26	-	18102/2
Mycobacterium africanum MAL020107	1354186	PRJNA211676	211676	Terrabacteria group	Actinobacteria	4.3819	65.6	-	JKZO01	2	4242	4042	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02231143	GCA_000666865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/865/GCA_000666865.1_Myco_afri_MAL020107_V1	-	MAL020107
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.51025	66.7	-	LOTV01	98	7895	7507	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449157	GCA_001522335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/335/GCA_001522335.1_ASM152233v1	-	INT1-BP233
Enterococcus hirae 67-03-C5	1262665	PRJNA182154	182154	Terrabacteria group	Firmicutes	2.84959	36.8	-	LGUM01	149	2734	2172	6/30/17	7/3/17	Contig	University of Saskatchewan	SAMN03801245	GCA_002213345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/345/GCA_002213345.1_ASM221334v1	-	67-03-C5
Streptococcus sobrinus TCI-349	1074073	PRJNA71915	71915	Terrabacteria group	Firmicutes	2.07366	43.7	-	AGGW01	511	2118	1799	10/6/11	3/30/17	Contig	JCVI	SAMN02436535	GCA_000228205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/205/GCA_000228205.2_SMUT2-NEX_2-349	-	TCI-349
Morganella morganii F675	1428452	PRJEB6425	251631	Proteobacteria	Gammaproteobacteria	4.19646	51	-	CCFB01	12	4081	3735	7/15/14	4/2/17	Scaffold	URMITE	SAMEA2602632	GCA_000752335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/335/GCA_000752335.1_Morganella_morganii_F675	-	-
Geobacillus sp. 44C	1963024	PRJNA354604	354604	Terrabacteria group	Firmicutes	3.2204	42.3	-	NADQ01	121	3362	3068	4/3/17	4/5/17	Scaffold	"Jet Propulsion Laboratory, California Institute of Technology"	SAMN06347029	GCA_002077865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/865/GCA_002077865.1_ASM207786v1	-	44C
Mycobacterium chelonae	1774	PRJNA347845	347845	Terrabacteria group	Actinobacteria	5.87811	63.8	-	MLIS01	665	5774	5444	10/26/16	4/5/17	Contig	University of Georgia	SAMN05898000	GCA_001853995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/995/GCA_001853995.1_ASM185399v1	-	15518
Vibrio campbellii	680	PRJNA349815	349815	Proteobacteria	Gammaproteobacteria	5.68691	45.4	-	MNLF01	82	5233	5074	4/3/17	4/5/17	Contig	University of Copenhagen	SAMN05933183	GCA_002078065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/065/GCA_002078065.1_Vibrio_harveyi_strain_VIB391	-	VIB391
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28399	32.4	chromosome:AP017591.1	-	1	-	-	1/24/17	1/27/17	Chromosome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053859	GCA_002356915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/915/GCA_002356915.1_ASM235691v1	-	LON-151
Campylobacter lanienae	75658	PRJNA341001	341001	Proteobacteria	delta/epsilon subdivisions	1.58843	34.6	-	MJJO01	23	1661	1593	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687021	GCA_002139335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/335/GCA_002139335.1_ASM213933v1	28854596	P0129
Rhodococcus fascians A3b	1443895	PRJNA233522	233522	Terrabacteria group	Actinobacteria	6.03282	64.3	-	JMEY01	34	5758	5579	9/30/14	4/2/17	Scaffold	Oregon State University	SAMN02569992	GCA_000760675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/675/GCA_000760675.1_R_fas_A3b	-	A3b
Piscirickettsia salmonis T-GIM	1277602	PRJNA185169	185169	Proteobacteria	Gammaproteobacteria	2.93655	39.5	-	JRHD01	342	2973	2791	10/6/14	4/2/17	Contig	Fraunhofer Chile Research Center for Systems Biotechnology Bio-Computing Division	SAMN03031340	GCA_000764075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/075/GCA_000764075.1_ASM76407v1	-	T-GIM
Leptospira kirschneri serovar Grippotyphosa str. Duyster-Boelhouwer	1049944	PRJNA74193	74193	Spirochaetes	Spirochaetia	4.27063	35.9	-	AHPZ01	266	3857	3540	2/3/12	5/18/17	Scaffold	J. Craig Venter Institute	SAMN00739367	GCA_000246155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/155/GCA_000246155.2_CLC_glsol046	-	Duyster-Boelhouwer
Salinispora pacifica CNT150	1136423	PRJNA169843	169843	Terrabacteria group	Actinobacteria	5.03854	69.4	-	AZVX01	160	4883	4425	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597228	GCA_000514435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/435/GCA_000514435.1_ASM51443v1	-	CNT150
Elizabethkingia anophelis NUH6	1338016	PRJNA205482	205482	FCB group	Bacteroidetes/Chlorobi group	4.1238	35.6	-	ASYJ01	74	3831	3712	11/7/13	4/2/17	Contig	SCELSE	SAMN02470990	GCA_000496035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/035/GCA_000496035.1_NUH6	24012265	NUH6
Vibrio cyclitrophicus ZF264	1136175	PRJNA81895	81895	Proteobacteria	Gammaproteobacteria	4.91094	43.6	-	AIDQ02	56	4325	4189	3/26/12	4/5/17	Scaffold	Massachusetts Institute of Technology	SAMN02470509	GCA_000256445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/445/GCA_000256445.2_ASM25644v2	22491847	ZF264
Pseudomonas chlororaphis subsp. chlororaphis NBRC 3904	1215096	PRJDB204	171623	Proteobacteria	Gammaproteobacteria	6.77165	63	-	BCZX01	36	6180	6018	4/4/17	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00046925	GCA_002091535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/535/GCA_002091535.1_ASM209153v1	-	NBRC 3904
Helicobacter pylori BM012A	1407462	PRJNA224090	224090	Proteobacteria	delta/epsilon subdivisions	1.66043	38.9	chromosome:NC_022886.1/CP006888.1	-	1	1663	1493	11/22/13	3/24/17	Complete Genome	Pennsylvania State University	SAMN02376623	GCA_000498315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/315/GCA_000498315.1_ASM49831v1	24340004	BM012A
Streptomyces sp. 1H-SSA4	2014920	PRJNA391271	391271	Terrabacteria group	Actinobacteria	10.9894	70	chromosome:CP022161.1	-	1	-	-	7/3/17	7/3/17	Chromosome	Northeast Agricultural University	SAMN07260326	GCA_002214185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/185/GCA_002214185.1_ASM221418v1	-	1H-SSA4
Paeniclostridium sordellii	1505	PRJEB8142	277666	Terrabacteria group	Firmicutes	3.54506	27.3	-	CDNI01	27	3502	3326	3/13/15	4/4/17	Contig	WTSI	SAMEA1572114	GCA_001372715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/715/GCA_001372715.1_JGS6961	-	JGS6961
Acinetobacter sp. NIPH 284	1217704	PRJNA183246	183246	Proteobacteria	Gammaproteobacteria	3.19061	39	-	1-Apr	22	3096	2799	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01087868	GCA_000369425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/425/GCA_000369425.1_Acin_sp_NIPH_284_V1	-	NIPH 284
Klebsiella sp. NFIX11	1566182	PRJEB15978	348292	Proteobacteria	Gammaproteobacteria	5.21047	58.2	-	FMTQ01	22	5106	4876	10/14/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159441	GCA_900100145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/145/GCA_900100145.1_IMG-taxon_2600255287_annotated_assembly	-	NFIX11
Flavobacterium sp. A45	1945862	PRJNA369723	369723	FCB group	Bacteroidetes/Chlorobi group	4.34677	34.3	-	MUNX01	159	3672	3548	2/16/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN06293009	GCA_002001005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/005/GCA_002001005.1_ASM200100v1	-	A45
Frankia sp. KB5	683318	PRJNA321004	321004	Terrabacteria group	Actinobacteria	5.45556	70.1	-	MRUJ01	420	4942	4346	4/18/17	4/21/17	Contig	University of New Hampshire	SAMN04962126	GCA_002099325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/325/GCA_002099325.1_ASM209932v1	-	KB5
Bacillus sp. BT1B_CT2	665958	PRJNA40001	40001	Terrabacteria group	Firmicutes	4.36955	45.8	-	ACWC01	24	4580	4271	1/11/11	5/18/17	Scaffold	Broad Institute	SAMN02463786	GCA_000186125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/125/GCA_000186125.1_Bacillus_BT1B_CT2_V1	-	BT1B_CT2
Clostridium sp. HMSC19B12	1581184	PRJNA269813	269813	Terrabacteria group	Firmicutes	4.28647	28.2	-	LWPE01	113	3990	3854	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436146	GCA_001806635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/635/GCA_001806635.1_ASM180663v1	-	HMSC19B12
Sphingomonas sp. Leaf62	1736228	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.14241	66	-	LMLN01	33	3748	3595	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151608	GCA_001421915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/915/GCA_001421915.1_Leaf62	26633631	Leaf62
Helicobacter pylori BM012S	1407463	PRJNA229079	229079	Proteobacteria	delta/epsilon subdivisions	1.66047	38.9	chromosome:NC_022911.1/CP006889.1	-	1	1662	1488	11/22/13	3/24/17	Complete Genome	Pennsylvania State University	SAMN02376624	GCA_000498335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/335/GCA_000498335.1_ASM49833v1	24340004	BM012S
Rhodococcus sp. JVH1	745408	PRJNA46601	46601	Terrabacteria group	Actinobacteria	9.18108	67	-	AKKP01	173	8610	8073	7/20/12	5/19/17	Contig	Thompson Rivers University	SAMN02471208	GCA_000280725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/725/GCA_000280725.1_ASM28072v1	22965106	JVH1
Enterobacter sp. MGH 37	1329833	PRJNA201952	201952	Proteobacteria	Gammaproteobacteria	5.08833	54.8	-	JCLI01	7	4992	4743	2/3/14	4/10/17	Scaffold	Broad Institute	SAMN02138577	GCA_000534515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/515/GCA_000534515.1_Ente_cloa_complex_MGH_37_V1	-	MGH 37
Staphylococcus sp. HMSC064E11	1715101	PRJNA296229	296229	Terrabacteria group	Firmicutes	2.50336	32	-	LTJP01	84	2471	2351	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477513	GCA_001809495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/495/GCA_001809495.1_ASM180949v1	-	HMSC064E11
Corynebacterium sp. HMSC29G08	1581069	PRJNA269838	269838	Terrabacteria group	Actinobacteria	2.40784	60.1	-	LWOR01	88	2313	2178	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436225	GCA_001806875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/875/GCA_001806875.1_ASM180687v1	-	HMSC29G08
Arthrobacter sp. H14	1312959	PRJNA232079	232079	Terrabacteria group	Actinobacteria	4.26613	62	-	AZRX01	158	4388	3797	1/14/14	4/9/17	Scaffold	University of Auckland	SAMN02429162	GCA_000520495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/495/GCA_000520495.1_Ah14DRAFT	25649291	H14
Bradyrhizobium sp. DOA9	1126627	PRJDB1640	243416	Proteobacteria	Alphaproteobacteria	7.85055	64.5	-	BAWE01	2	7364	7109	4/3/14	4/12/17	Scaffold	Tokyo University of Agriculture and Technology	SAMD00000001	GCA_000617845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/845/GCA_000617845.2_ASM61784v2	25710540	DOA9
Streptococcus sp. HMSC10E12	1581080	PRJNA269849	269849	Terrabacteria group	Firmicutes	2.34767	39.7	-	LTZZ01	58	2177	2059	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03287009	GCA_001807855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/855/GCA_001807855.1_ASM180785v1	-	HMSC10E12
Mycobacterium sp. Root135	1736457	PRJNA297942	297942	Terrabacteria group	Actinobacteria	6.50143	67.4	-	LMEZ01	11	6187	6042	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155726	GCA_001426545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/545/GCA_001426545.1_Root135	26633631	Root135
Serratia sp. 2880STDY5682895	1805637	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.07211	60.1	-	FCJL01	14	4808	4653	1/21/16	4/11/17	Scaffold	SC	SAMEA2273968	GCA_001537265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/265/GCA_001537265.1_12082_3_3	-	2880STDY5682895
Pantoea sp. AV62	1990688	PRJNA386770	386770	Proteobacteria	Gammaproteobacteria	4.97337	55.8	-	NHBE01	57	4739	4260	7/26/17	7/28/17	Contig	Hasselt University	SAMN07126171	GCA_002233725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/725/GCA_002233725.1_ASM223372v1	-	AV62
Prevotella sp. 10(H)	1158294	PRJNA195815	195815	FCB group	Bacteroidetes/Chlorobi group	4.2992	39.4	-	JOMI01	9	3571	3452	6/24/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02745921	GCA_000711235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/235/GCA_000711235.1_ASM71123v1	-	10(H)
Enterococcus sp. HMSC076E04	1739465	PRJNA300115	300115	Terrabacteria group	Firmicutes	2.87679	38.1	-	LTVD01	90	2904	2713	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480387	GCA_001814285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/285/GCA_001814285.1_ASM181428v1	-	HMSC076E04
Lactobacillus sp. OTU4228	1572760	PRJEB7876	282869	Terrabacteria group	Firmicutes	1.87964	38	-	CDLD01	41	1902	1713	5/2/15	4/10/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA3146092	GCA_001006945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/945/GCA_001006945.1_Lac4228	-	-
Novosphingobium sp. 63-713	1895900	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	5.55425	63.2	-	MKVS01	53	4951	4822	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660613	GCA_001898925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/925/GCA_001898925.1_ASM189892v1	-	-
Treponema sp. UBA750	1947746	PRJNA348753	348753	Spirochaetes	Spirochaetia	2.05132	39.9	-	DBKM01	52	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456435	GCA_002298495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/495/GCA_002298495.1_ASM229849v1	28894102	-
Citrobacter sp. AATXQ	1779184	PRJNA279608	279608	Proteobacteria	Gammaproteobacteria	4.88392	52	-	LUGC01	92	4873	4558	3/10/16	4/12/17	Contig	NHGRI	SAMN03455927	GCA_001586835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/835/GCA_001586835.1_ASM158683v1	-	AATXQ
Methylobacterium sp. Leaf125	1736265	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	5.45263	68.9	-	LMNU01	49	5000	4820	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151645	GCA_001423085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/085/GCA_001423085.1_Leaf125	26633631	Leaf125
Nocardioides sp. Soil774	1736408	PRJNA298127	298127	Terrabacteria group	Actinobacteria	3.84586	72.1	-	LMSM01	12	3721	3626	11/2/15	4/11/17	Contig	ETH Zurich	SAMN04155673	GCA_001428125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/125/GCA_001428125.1_Soil774	26633631	Soil774
Erythrobacter sp. REDSEA-S34_B3	1811533	PRJNA289734	289734	Proteobacteria	Alphaproteobacteria	2.68623	63.7	-	LUNR01	7	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534567	GCA_001626435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/435/GCA_001626435.1_ASM162643v1	27377622	-
Marinobacter sp. DSM 26671	1761793	PRJEB17243	351427	Proteobacteria	Gammaproteobacteria	4.86789	57.1	-	FONF01	77	4439	4222	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487869	GCA_900112835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/835/GCA_900112835.1_IMG-taxon_2619618958_annotated_assembly	-	DSM 26671
Acidovorax sp. Leaf76	1736236	PRJNA297956	297956	Proteobacteria	Betaproteobacteria	5.87015	66.8	-	LMLY01	30	5213	5055	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151616	GCA_001422065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/065/GCA_001422065.1_Leaf76	26633631	Leaf76
Psychrobacter sp. TB15	494416	PRJNA228323	228323	Proteobacteria	Gammaproteobacteria	3.06684	44.8	-	AYXN01	43	2602	2474	12/20/13	4/17/17	Scaffold	University of Florence	SAMN02597460	GCA_000511655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/655/GCA_000511655.1_PsyTB15_v1.0	-	TB15
Caulobacter sp. 35-67-4	1970331	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.37112	66.9	-	NCEY01	1111	2944	2718	8/16/17	8/16/17	Scaffold	None	SAMN06622334	GCA_002280925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/925/GCA_002280925.1_ASM228092v1	-	-
Janthinobacterium sp. GW456P	1981506	PRJNA383021	383021	Proteobacteria	Betaproteobacteria	6.2692	62.9	-	NEHB01	78	5633	5410	5/11/17	5/23/17	Scaffold	Lawrence Berkeley National Laboratory	SAMN06758626	GCA_002127655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/655/GCA_002127655.1_ASM212765v1	-	GW456P
Eubacterium sp. CAG:202	1262884	PRJEB755	206689	Terrabacteria group	Firmicutes	1.97412	38.9	-	CBEO01	102	1854	1817	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138723	GCA_000436775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/775/GCA_000436775.1_MGS202	-	-
Alcanivorax sp. HI0011	1822220	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	5.63201	59	-	LWEL01	2482	5016	4358	5/2/16	5/2/16	Contig	Massachusetts Institute of Technology	SAMN04580759	GCA_001635565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/565/GCA_001635565.1_ASM163556v1	-	HI0011
Brevundimonas sp. UBA1471	1946122	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.51853	66.6	-	DCSH01	37	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453299	GCA_002325515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/515/GCA_002325515.1_ASM232551v1	28894102	-
Stenotrophomonas sp. UBA2124	1947550	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.70951	65.6	-	DCXY01	52	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450341	GCA_002329155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/155/GCA_002329155.1_ASM232915v1	28894102	-
Paenibacillus sp. D9	665792	PRJNA277007	277007	Terrabacteria group	Firmicutes	5.6453	58.1	-	JZEJ01	7	5142	4926	4/10/15	4/17/17	Scaffold	University of KwaZulu Natal (Westville campus)	SAMN03383164	GCA_001188365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/365/GCA_001188365.1_ASM118836v1	-	D9
Ruminococcus sp. CAG:9	1262967	PRJEB1030	206921	Terrabacteria group	Firmicutes	2.86541	41.7	-	CBHS01	260	2520	2492	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138679	GCA_000435855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/855/GCA_000435855.1_MGS9	-	-
Thioalkalivibrio sp. ALMg11	1158165	PRJNA178485	178485	Proteobacteria	Gammaproteobacteria	3.03779	66	-	ARJF01	18	2981	2832	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440463	GCA_000377905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/905/GCA_000377905.1_ASM37790v1	-	ALMg11
Bacteroides sp. HMSC067B03	1739298	PRJNA299948	299948	FCB group	Bacteroidetes/Chlorobi group	6.51325	42.8	-	LTGI01	295	5524	5184	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477614	GCA_001811315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/315/GCA_001811315.1_ASM181131v1	-	HMSC067B03
Shigella sp. FC3196	1898678	PRJNA342388	342388	Proteobacteria	Gammaproteobacteria	4.61217	50.7	-	MINV01	678	5039	4264	9/17/16	9/17/16	Contig	Christian Medical College	SAMN05756150	GCA_001730405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/405/GCA_001730405.1_ASM173040v1	-	FC3196
Prochlorococcus sp. HOT208_60m_805A16	1961081	PRJNA375759	375759	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.99935	31.2	-	MWPA01	234	1121	986	3/14/17	3/16/17	Scaffold	Massachusetts Institute of Technology	SAMN06345441	GCA_002026045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/045/GCA_002026045.1_ASM202604v1	-	HOT208_60m_805A16
Actinomyces sp. HMSC065F11	1739395	PRJNA300045	300045	Terrabacteria group	Actinobacteria	2.06433	56.1	-	LTXG01	27	1866	1771	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480058	GCA_001813085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/085/GCA_001813085.1_ASM181308v1	-	HMSC065F11
Propionibacterium sp. KPL2008	1203634	PRJNA170374	170374	Terrabacteria group	Actinobacteria	2.56055	60	-	AXME01	2	2566	2415	10/21/13	4/17/17	Contig	Broad Institute	SAMN02597011	GCA_000477755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/755/GCA_000477755.1_Prop_sp_KPL2008_V1	-	KPL2008
Alistipes sp. UBA943	1946018	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.34007	54.5	-	DBDB01	102	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06454457	GCA_002293345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/345/GCA_002293345.1_ASM229334v1	28894102	-
Campylobacter sp. 113	2039337	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.85403	30.2	-	NXAY01	115	1990	1841	9/27/17	9/27/17	Contig	University of California at Davis	SAMN05711878	GCA_002383985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/985/GCA_002383985.1_ASM238398v1	-	113
Neisseria sp. HMSC061E12	1739301	PRJNA299951	299951	Proteobacteria	Betaproteobacteria	2.22919	48.8	-	LTGF01	37	2154	2027	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477613	GCA_001811365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/365/GCA_001811365.1_ASM181136v1	-	HMSC061E12
Pseudonocardia sp. SCN 72-51	1660130	PRJNA279279	279279	Terrabacteria group	Actinobacteria	5.46804	72.4	-	MEEZ01	408	5468	4960	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652475	GCA_001725125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/125/GCA_001725125.1_ASM172512v1	26031303	-
Sphingobacterium sp. UBA2074	1947487	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	5.37324	39.8	-	DCZW01	199	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454686	GCA_002331955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/955/GCA_002331955.1_ASM233195v1	28894102	-
Rothia sp. HMSC071C12	1739446	PRJNA300096	300096	Terrabacteria group	Actinobacteria	2.35307	59.4	-	LTVT01	37	1849	1756	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480369	GCA_001813895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/895/GCA_001813895.1_ASM181389v1	-	HMSC071C12
Rhodanobacter sp. SCN 67-45	1660133	PRJNA279279	279279	Proteobacteria	Gammaproteobacteria	4.04257	67.2	-	MEFB01	218	3694	3348	9/13/16	9/13/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03652477	GCA_001724655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/655/GCA_001724655.1_ASM172465v1	26031303	-
Sphingobium sp. ba1	1522072	PRJNA255228	255228	Proteobacteria	Alphaproteobacteria	4.45979	63	-	JPPQ01	87	4480	4005	8/26/14	4/9/17	Scaffold	IBBE Istituto di biomembrane e bioenergetica	SAMN02911527	GCA_000743655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/655/GCA_000743655.1_ASM74365v1	25288103	ba1
Halomonas sp. KX33721	1819251	PRJNA315927	315927	Proteobacteria	Gammaproteobacteria	3.51425	56.7	-	LVIA01	108	3366	2964	3/23/16	4/17/17	Contig	"Institute of Oceanology, Chinese Academy of Sciences"	SAMN04571870	GCA_001596805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/805/GCA_001596805.1_ASM159680v1	-	KX33721
Rhizobium sp. OK665	1500305	PRJNA247559	247559	Proteobacteria	Alphaproteobacteria	6.03056	59.9	-	JQJO01	36	5723	5555	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02787059	GCA_000745575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/575/GCA_000745575.1_ASM74557v1	-	OK665
Chryseobacterium sp. JM1	1233950	PRJNA255970	255970	FCB group	Bacteroidetes/Chlorobi group	5.25616	38	-	JPRN01	31	4694	4565	8/5/14	4/9/17	Contig	GCAT-SEEK	SAMN02934164	GCA_000737715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/715/GCA_000737715.1_ASM73771v1	-	JM1
Mesorhizobium sp. L2C066B000	1287105	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.63831	62.5	-	AYWZ01	60	6608	6086	12/3/13	4/9/17	Contig	University of Southern California	SAMN02359655	GCA_000502335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/335/GCA_000502335.1_Mloti_L2C066B000	-	L2C066B000
Micavibrio sp. UBA3503	1946922	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.13302	57.4	-	DFPY01	69	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450557	GCA_002377505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/505/GCA_002377505.1_ASM237750v1	28894102	-
Variovorax sp. NFACC28	1566273	PRJEB16591	349869	Proteobacteria	Betaproteobacteria	8.24641	67.3	-	FNUI01	54	7723	7461	10/22/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159371	GCA_900107915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/915/GCA_900107915.1_IMG-taxon_2599185227_annotated_assembly	-	NFACC28
Xanthomonas translucens	343	PRJNA302486	302486	Proteobacteria	Gammaproteobacteria	4.71973	68	-	LNVJ01	306	4051	3668	12/8/15	4/4/17	Scaffold	Kansas State University	SAMN04279082	GCA_001461925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/461/925/GCA_001461925.1_ASM146192v1	-	CR31
Snodgrassella alvi	1196083	PRJNA339423	339423	Proteobacteria	Betaproteobacteria	2.43026	41.2	-	NAGZ01	122	2195	2084	4/13/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603555	GCA_002089015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/015/GCA_002089015.1_ASM208901v1	-	A11
Microbacterium sp. Root280D1	1736510	PRJNA297942	297942	Terrabacteria group	Actinobacteria	3.59352	68.1	-	LMJK01	4	3512	3422	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155779	GCA_001428975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/975/GCA_001428975.1_Root280D1	26633631	Root280D1
Cupriavidus sp. JdFR-90	1934999	PRJNA269163	269163	Proteobacteria	Betaproteobacteria	2.66603	62.6	-	MTOZ01	703	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226407	GCA_002010805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/805/GCA_002010805.1_ASM201080v1	28350381	-
Mycobacterium fortuitum subsp. fortuitum DSM 46621 = ATCC 6841	1214102	PRJNA304096	304096	Terrabacteria group	Actinobacteria	6.25708	65.3	chromosome:CP014258.1	-	1	5785	3211	2/8/16	4/6/16	Chromosome	CSIR-CDRI	SAMN04295031	GCA_001475495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/495/GCA_001475495.2_ASM147549v2	-	ATCC 6841
uncultured Blautia sp.	765821	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.55779	44	-	FMEU01	42	3228	3168	8/16/16	8/16/16	Scaffold	SC	SAMEA3545288	GCA_900066335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/335/GCA_900066335.1_13414_6_64	-	-
Blastomonas sp. CCH13-A3	1768748	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	3.35076	64	-	LSHW01	7538	-	-	2/10/16	2/10/16	Contig	Georgia Institute of Technology	SAMN04299420	GCA_001557245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/245/GCA_001557245.1_ASM155724v1	-	CCH13-A3
Raoultella ornithinolytica	54291	PRJNA385790	385790	Proteobacteria	Gammaproteobacteria	5.75773	55.3	-	NGAI01	62	5546	5315	8/23/17	8/25/17	Scaffold	Zhejiang University	SAMN06909733	GCA_002266665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/665/GCA_002266665.1_ASM226666v1	-	Ro24522
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.85543	58.9	-	LNWV01	45	4641	4511	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339859	GCA_001681645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/645/GCA_001681645.1_ASM168164v1	-	G946
Curtobacterium sp. MCBA15_013	1898739	PRJNA342146	342146	Terrabacteria group	Actinobacteria	3.94821	71	-	MJGQ01	86	3741	3552	11/2/16	4/13/17	Scaffold	Massachusetts Institute of Technology	SAMN05736490	GCA_001865095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/095/GCA_001865095.1_ASM186509v1	-	MCBA15_013
Streptomyces rimosus subsp. rimosus	132474	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.4851	71.9	-	LGCQ01	299	8224	7812	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900603	GCA_001279065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/065/GCA_001279065.1_ASM127906v1	-	NRRL WC-3869
Butyrivibrio sp. AD3002	1280670	PRJNA185689	185689	Terrabacteria group	Firmicutes	4.31653	41.9	-	ATVV01	73	3889	3722	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441237	GCA_000420905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/905/GCA_000420905.1_ASM42090v1	-	AD3002
Ensifer sp. 1H6	1911585	PRJNA349070	349070	Proteobacteria	Alphaproteobacteria	7.26605	61.4	-	MOAI01	87	6947	6362	1/31/17	4/17/17	Contig	Hasselt University	SAMN05919926	GCA_001976035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/035/GCA_001976035.1_ASM197603v1	-	1H6
Sphingopyxis sp. H057	1759076	PRJNA294421	294421	Proteobacteria	Alphaproteobacteria	4.28529	64.9	-	LNSD01	33	4217	4110	12/15/15	4/11/17	Contig	US EPA	SAMN04256157	GCA_001468315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/315/GCA_001468315.1_ASM146831v1	-	H057
Salinivibrio sp. MA440	1909456	PRJNA368800	368800	Proteobacteria	Gammaproteobacteria	3.42155	49.3	-	MUFI01	102	3137	2986	2/14/17	2/22/17	Contig	Universidad de Sevilla	SAMN06272996	GCA_001996265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/265/GCA_001996265.1_ASM199626v1	-	MA440
Helicobacter pylori 26695-1	1391726	PRJDB1447	231447	Proteobacteria	delta/epsilon subdivisions	1.66764	38.9	chromosome:NZ_AP013354.1/AP013354.1	-	1	1644	1510	10/2/13	3/25/17	Complete Genome	Oita university	SAMD00061015	GCA_000829095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/095/GCA_000829095.1_ASM82909v1	24233587	26695-1
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.62835	34.9	-	LZHH01	125	2526	2321	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179609	GCA_001690595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/595/GCA_001690595.1_ASM169059v1	-	Choc5-1
Lysinibacillus sp. UBA2078	1946770	PRJNA348753	348753	Terrabacteria group	Firmicutes	4.56302	37.6	-	DCZS01	147	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454688	GCA_002331675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/675/GCA_002331675.1_ASM233167v1	28894102	-
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.07952	42.1	-	FTPZ01	2	966	900	3/18/17	3/24/17	Contig	Functional Genomics Genter Zurich	SAMEA4555936	GCA_900149605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/605/GCA_900149605.1_8-17a	-	-
Klebsiella michiganensis	1134687	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.21343	55.9	-	JWDP01	245	6048	5797	7/10/15	2/25/17	Contig	University of Washington	SAMN03197045	GCA_001052045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/045/GCA_001052045.1_ASM105204v1	26230489	1082_KOXY
Achromobacter sp. 2789STDY5663426	1806475	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	6.52914	67.6	-	CYTQ01	80	5971	5776	9/19/15	4/11/17	Scaffold	SC	SAMEA2258935	GCA_001298895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/895/GCA_001298895.1_11861_6_69	-	2789STDY5663426
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	6.88858	43.6	-	MPTW01	70	6049	5893	1/18/17	4/6/17	Contig	Cornell University	SAMN05772539	GCA_001955545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/545/GCA_001955545.1_ASM195554v1	-	FSL H7-0443
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.67997	50.8	-	MPPX01	408	2867	2466	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016239	GCA_002020165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/165/GCA_002020165.1_ASM202016v1	-	-
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.78909	32.3	-	FQKG01	17	2795	2619	11/23/16	4/5/17	Contig	SC	SAMEA3449087	GCA_900126655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/655/GCA_900126655.1_17175_3_31	-	3688STDY6125079
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.38081	57.8	-	NFVP01	47	5404	5149	6/9/17	6/12/17	Contig	JCVI	SAMN05960874	GCA_002186565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/565/GCA_002186565.1_ASM218656v1	-	PO416
Lactobacillus parabuchneri	152331	PRJNA357007	357007	Terrabacteria group	Firmicutes	2.56315	43.4	-	MSBG01	65	2460	2293	4/18/17	4/21/17	Scaffold	University of Bern	SAMN06130987	GCA_002095905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/905/GCA_002095905.1_ASM209590v1	28261177	FAM23280
Lactobacillus taiwanensis	508451	PRJNA384810	384810	Terrabacteria group	Firmicutes	1.97049	34.2	-	NGOX01	46	1941	1742	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848407	GCA_002253565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/565/GCA_002253565.1_ASM225356v1	-	103n
Enterobacter kobei	208224	PRJNA218840	218840	Proteobacteria	Gammaproteobacteria	4.66918	55	-	JSVH01	216	4614	4229	11/29/16	4/6/17	Contig	Tianjin University of Science and Technology	SAMN03135879	GCA_001887225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/225/GCA_001887225.1_ASM188722v1	-	BH-18
Proteiniphilum sp. UBA4988	1947264	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.16556	41.4	-	DGZE01	102	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450878	GCA_002396965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/965/GCA_002396965.1_ASM239696v1	28894102	-
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.64991	66.8	-	LPGY01	72	6168	5887	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449524	GCA_001531005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/005/GCA_001531005.1_ASM153100v1	-	MSMB1918WGS
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.73165	67.6	-	LPFV01	105	7056	6707	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449495	GCA_001530645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/645/GCA_001530645.1_ASM153064v1	-	MSMB1512WGS
Syntrophomonas sp. UBA4922	1947626	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.76873	49.6	-	DHBS01	52	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457719	GCA_002398825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/825/GCA_002398825.1_ASM239882v1	28894102	-
Oleiphilus sp. HI0050	1822236	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	4.81989	44.3	-	LWFB01	2036	4508	3654	5/2/16	5/2/16	Contig	Massachusetts Institute of Technology	SAMN04580775	GCA_001635615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/615/GCA_001635615.1_ASM163561v1	-	HI0050
Fibrobacter sp. UWB15	1938898	PRJEB20265	381722	FCB group	Fibrobacteres	3.46409	50.2	-	FXBA01	24	2855	2737	4/20/17	5/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05720473	GCA_900177705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/705/GCA_900177705.1_IMG-taxon_2718218506_annotated_assembly	-	UWB15
Xanthomonas axonopodis pv. manihotis str. IBSBF 2539	1185676	PRJNA163747	163747	Proteobacteria	Gammaproteobacteria	4.95261	65.1	-	AKDH01	138	4427	4104	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090312	GCA_000265985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/985/GCA_000265985.1_IBSBF2539	22699502	IBSBF 2539
Catabacter sp. UBA1685	1946247	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.39227	55.4	-	DCKB01	78	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452876	GCA_002320595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/595/GCA_002320595.1_ASM232059v1	28894102	-
Candidatus Microthrix sp. UBA2127	1946166	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.01077	64.3	-	DCXV01	72	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450344	GCA_002329105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/105/GCA_002329105.1_ASM232910v1	28894102	-
Candidatus Microthrix sp. UBA2111	1946165	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.17578	66.4	-	DCYL01	203	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455329	GCA_002331065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/065/GCA_002331065.1_ASM233106v1	28894102	-
Catabacter sp. UBA1428	1946245	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.57795	56.1	-	DCTY01	76	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456894	GCA_002329335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/335/GCA_002329335.1_ASM232933v1	28894102	-
Xanthomonas axonopodis pv. manihotis str. IBSBF 2672	1185681	PRJNA163757	163757	Proteobacteria	Gammaproteobacteria	4.85651	65.2	-	AKDM01	131	4307	3993	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090317	GCA_000266005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/005/GCA_000266005.1_IBSBF2672	22699502	IBSBF 2672
Fibrobacter sp. UWP2	1896216	PRJEB18280	355706	FCB group	Fibrobacteres	3.23497	53.4	-	FQYM01	72	2734	2610	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05720471	GCA_900141705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/705/GCA_900141705.1_IMG-taxon_2700988687_annotated_assembly	-	UWP2
Oleiphilus sp. HI0065	1822241	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	6.39861	47.5	-	LWFG01	2693	5856	4935	5/2/16	5/2/16	Contig	Massachusetts Institute of Technology	SAMN04580780	GCA_001635715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/715/GCA_001635715.1_ASM163571v1	-	HI0065
Syntrophomonas sp. UBA4889	1947622	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.98988	46.9	-	DHCZ01	139	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451272	GCA_002399145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/145/GCA_002399145.1_ASM239914v1	28894102	-
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.52585	67.7	-	LPGZ01	99	6848	6502	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449525	GCA_001531025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/025/GCA_001531025.1_ASM153102v1	-	MSMB1943WGS
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.04874	66.5	-	LPGT01	94	6479	6166	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449519	GCA_001531325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/325/GCA_001531325.1_ASM153132v1	-	MSMB1843WGS
Proteiniphilum sp. UBA4932	1947262	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.73276	46.7	-	DHBI01	55	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454914	GCA_002397755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/755/GCA_002397755.1_ASM239775v1	28894102	-
Enterobacter kobei	208224	PRJNA361484	361484	Proteobacteria	Gammaproteobacteria	4.99031	56.1	-	NEWG01	286	4958	4551	5/16/17	5/24/17	Contig	University of Sao Paulo	SAMN06887675	GCA_002145455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/145/455/GCA_002145455.1_ASM214545v1	-	EkBL-II-14(1)
Lactobacillus taiwanensis	508451	PRJNA384810	384810	Terrabacteria group	Firmicutes	1.96648	34.2	-	NGOW01	72	1956	1736	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848408	GCA_002253575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/575/GCA_002253575.1_ASM225357v1	-	103q
Lactobacillus parabuchneri	152331	PRJNA357007	357007	Terrabacteria group	Firmicutes	2.61621	43.3	-	MSBH01	79	2524	2335	4/18/17	4/21/17	Scaffold	University of Bern	SAMN06130988	GCA_002095915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/915/GCA_002095915.1_ASM209591v1	28261177	FAM23281
Klebsiella quasipneumoniae subsp. quasipneumoniae	1667327	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.59801	57.6	-	NFWG01	105	5614	5277	6/9/17	6/12/17	Contig	JCVI	SAMN05960883	GCA_002186915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/915/GCA_002186915.1_ASM218691v1	-	PO1285
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79756	32.3	-	FQKL01	13	2807	2633	11/24/16	4/6/17	Contig	SC	SAMEA3449088	GCA_900126665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/665/GCA_900126665.1_17175_3_32	-	3688STDY6125080
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.55869	50.8	-	MPQD01	57	2474	2389	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016249	GCA_002020195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/195/GCA_002020195.1_ASM202019v1	-	-
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	6.85853	44.2	-	MPVO01	25	6057	5844	1/18/17	4/6/17	Contig	Cornell University	SAMN05929604	GCA_001955555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/555/GCA_001955555.1_ASM195555v1	-	FSL F4-0077
Achromobacter sp. 2789STDY5608611	1806478	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	6.3682	67.8	-	CYTH01	23	5806	5659	9/19/15	4/11/17	Scaffold	SC	SAMEA2247576	GCA_001298915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/915/GCA_001298915.1_11861_6_5	-	2789STDY5608611
Klebsiella michiganensis	1134687	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.21373	55.9	-	JWDN01	256	6055	5800	7/10/15	2/21/17	Contig	University of Washington	SAMN03197047	GCA_001052785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/785/GCA_001052785.1_ASM105278v1	26230489	1084_KOXY
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.10635	42.2	-	FTPW01	3	996	920	3/18/17	3/24/17	Contig	Functional Genomics Genter Zurich	SAMEA4555937	GCA_900149615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/615/GCA_900149615.1_11-17a	-	-
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.68963	35.5	-	LZHP01	103	2621	2423	7/21/16	4/10/17	Contig	University of Texas at Austin	SAMN05179616	GCA_001690605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/605/GCA_001690605.1_ASM169060v1	-	Nev6-6
Helicobacter pylori 26695-1CL	1391727	PRJDB1448	231448	Proteobacteria	delta/epsilon subdivisions	1.66724	38.9	chromosome:NZ_AP013356.1/AP013356.1	-	1	1643	1508	10/2/13	3/25/17	Complete Genome	Oita university	SAMD00061016	GCA_000829115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/115/GCA_000829115.1_ASM82911v1	24233587	26695-1CL
Sphingopyxis sp. H067	1759077	PRJNA294421	294421	Proteobacteria	Alphaproteobacteria	4.30872	64.8	-	LNSE01	32	4236	4120	12/15/15	4/11/17	Contig	US EPA	SAMN04256158	GCA_001468345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/345/GCA_001468345.1_ASM146834v1	-	H067
Ensifer sp. Root423	1736534	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	7.30652	62.3	-	LMEG01	47	6936	6621	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155803	GCA_001426275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/275/GCA_001426275.1_Root423	26633631	Root423
Butyrivibrio sp. VCB2006	1280679	PRJNA185706	185706	Terrabacteria group	Firmicutes	3.94773	41.1	-	ATVX01	40	3470	3322	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441238	GCA_000420945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/945/GCA_000420945.1_ASM42094v1	-	VCB2006
Streptomyces rimosus subsp. rimosus	132474	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.5278	72	-	LGCR01	336	8404	7935	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900604	GCA_001279075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/075/GCA_001279075.1_ASM127907v1	-	NRRL WC-3875
Curtobacterium sp. MCBA15_016	1898740	PRJNA342146	342146	Terrabacteria group	Actinobacteria	3.94787	70.8	-	MJGR01	77	3678	3453	11/2/16	4/13/17	Scaffold	Massachusetts Institute of Technology	SAMN05736492	GCA_001865105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/105/GCA_001865105.1_ASM186510v1	-	MCBA15_016
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.83734	58.9	-	LNWW01	70	4595	4458	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339860	GCA_001681675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/675/GCA_001681675.1_ASM168167v1	-	M41-2.2
Raoultella ornithinolytica	54291	PRJNA385790	385790	Proteobacteria	Gammaproteobacteria	5.7751	55.3	-	NGAJ01	60	5568	5323	8/23/17	8/25/17	Scaffold	Zhejiang University	SAMN06909732	GCA_002266675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/675/GCA_002266675.1_ASM226667v1	-	Ro24362
uncultured Blautia sp.	765821	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.89199	43	-	FMFE01	92	3615	3559	8/16/16	8/16/16	Scaffold	SC	SAMEA3545328	GCA_900066505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/505/GCA_900066505.1_13470_2_81	-	-
Cupriavidus sp. UBA2027	1946397	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	4.93657	63.9	-	DDBR01	17	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454469	GCA_002332825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/825/GCA_002332825.1_ASM233282v1	28894102	-
Microbacterium sp. AISO3	2002831	PRJNA386682	386682	Terrabacteria group	Actinobacteria	3.69631	69.7	-	NHRF01	232	3475	3351	6/21/17	6/24/17	Scaffold	University of Houston	SAMN07124007	GCA_002204305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/305/GCA_002204305.1_ASM220430v1	-	AISO3
Snodgrassella alvi	1196083	PRJNA239652	239652	Proteobacteria	Betaproteobacteria	2.40631	42.8	-	JFZV01	88	2229	2060	5/22/14	4/2/17	Scaffold	Yale University	SAMN02677641	GCA_000695545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/545/GCA_000695545.1_SnoalvwkB29v1.0	25053814	wkB29
Xanthomonas translucens	343	PRJNA302486	302486	Proteobacteria	Gammaproteobacteria	5.08877	68.1	-	LNVR01	151	4423	4005	12/8/15	4/4/17	Scaffold	Kansas State University	SAMN04279074	GCA_001461965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/461/965/GCA_001461965.1_ASM146196v1	-	P3
Variovorax sp. YR750	1884384	PRJEB16871	351012	Proteobacteria	Betaproteobacteria	8.09941	67.4	-	FOBJ01	58	7486	7282	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05518845	GCA_900109805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/805/GCA_900109805.1_IMG-taxon_2687453686_annotated_assembly	-	YR750
Mesorhizobium sp. L2C089B000	1287120	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.71046	62.5	-	AYWV01	40	6612	6157	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359659	GCA_000502355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/355/GCA_000502355.1_Mloti_L2C089B000	-	L2C089B000
Chryseobacterium sp. CF299	1500284	PRJNA247526	247526	FCB group	Bacteroidetes/Chlorobi group	4.49583	36.6	-	JQMA01	74	4154	3961	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02787069	GCA_000744495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/495/GCA_000744495.1_ASM74449v1	-	CF299
Rhizobium sp. OV201	1500307	PRJNA247562	247562	Proteobacteria	Alphaproteobacteria	7.18444	59.9	-	JQJZ01	62	7052	6635	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02787115	GCA_000745785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/785/GCA_000745785.1_ASM74578v1	-	OV201
Halomonas sp. ALS9	1805819	PRJNA319557	319557	Proteobacteria	Gammaproteobacteria	4.70383	54.5	-	LXRG01	233	4302	4178	5/18/16	4/12/17	Contig	Instituto de Nutricion y Tecnologia de los Alimentos - Universidad de Chile	SAMN04893747	GCA_001651035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/035/GCA_001651035.1_ASM165103v1	-	ALS9
Sphingobium sp. TCM1	453246	PRJNA321086	321086	Proteobacteria	Alphaproteobacteria	5.1548	64.3	-	LXVX01	41	4914	4738	5/24/16	4/17/17	Scaffold	Nagaoka University of Technology	SAMN04965946	GCA_001650725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/725/GCA_001650725.1_ASM165072v1	-	TCM1
Rhodanobacter sp. SCN 65-17	1660137	PRJNA279279	279279	Proteobacteria	Gammaproteobacteria	0.472134	65.5	-	MEGI01	31	412	373	9/13/16	9/13/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03652512	GCA_001725445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/445/GCA_001725445.1_ASM172544v1	26031303	-
Rothia sp. HMSC072E10	1739448	PRJNA300098	300098	Terrabacteria group	Actinobacteria	2.2451	62	-	LTVR01	25	1790	1682	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480370	GCA_001813965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/965/GCA_001813965.1_ASM181396v1	-	HMSC072E10
Pseudonocardia sp. SCN 73-27	1660132	PRJNA279279	279279	Terrabacteria group	Actinobacteria	6.9526	72.6	-	MEGH01	99	6741	6466	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652511	GCA_001725415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/415/GCA_001725415.1_ASM172541v1	26031303	-
Neisseria sp. HMSC063B05	1739328	PRJNA299978	299978	Proteobacteria	Betaproteobacteria	2.20633	49	-	LTYP01	70	2159	2046	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477637	GCA_001811855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/855/GCA_001811855.1_ASM181185v1	-	HMSC063B05
Campylobacter sp. 1	2039344	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.66668	30.5	-	NXBF01	56	1756	1626	9/27/17	9/27/17	Contig	University of California at Davis	SAMN06277490	GCA_002383995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/995/GCA_002383995.1_ASM238399v1	-	1
Alistipes sp. UBA940	1946017	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.4855	54.3	-	DBDE01	47	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06454456	GCA_002293425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/425/GCA_002293425.1_ASM229342v1	28894102	-
Propionibacterium sp. KPL2003	1203631	PRJNA170371	170371	Terrabacteria group	Actinobacteria	2.49342	60	-	AXMG01	2	2507	2370	10/21/13	4/17/17	Contig	Broad Institute	SAMN02597013	GCA_000477775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/775/GCA_000477775.1_Prop_sp_KPL2003_V1	-	KPL2003
Actinomyces sp. HMSC062G12	1739450	PRJNA300100	300100	Terrabacteria group	Actinobacteria	2.08593	65.5	-	LTVP01	23	1862	1768	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480372	GCA_001813985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/985/GCA_001813985.1_ASM181398v1	-	HMSC062G12
Prochlorococcus sp. HOT212_60m_826P21	1961099	PRJNA375761	375761	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.26373	31.3	-	MWPC01	358	1422	1236	3/14/17	3/16/17	Scaffold	Massachusetts Institute of Technology	SAMN06345459	GCA_002026065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/065/GCA_002026065.1_ASM202606v1	-	HOT212_60m_826P21
Shigella sp. FC2125	1898679	PRJNA342382	342382	Proteobacteria	Gammaproteobacteria	4.47236	50.7	-	MINQ01	543	4827	4190	9/17/16	9/17/16	Contig	Christian Medical College	SAMN05756138	GCA_001730475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/475/GCA_001730475.1_ASM173047v1	-	FC2125
Bacteroides sp. HMSC068A09	1739319	PRJNA299969	299969	FCB group	Bacteroidetes/Chlorobi group	6.03781	42.2	-	LTFO01	167	4853	4597	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477629	GCA_001811695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/695/GCA_001811695.1_ASM181169v1	-	HMSC068A09
Thioalkalivibrio sp. AKL12	1158159	PRJNA178486	178486	Proteobacteria	Gammaproteobacteria	2.9748	66.2	-	ARJG01	32	2854	2697	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441005	GCA_000377925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/925/GCA_000377925.1_ASM37792v1	-	AKL12
Ruminococcus sp. CAG:57	1262962	PRJEB938	206800	Terrabacteria group	Firmicutes	2.53119	43	-	CBFS01	121	2294	2264	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138683	GCA_000435935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/935/GCA_000435935.1_MGS57	-	-
Paenibacillus sp. GD6	1232431	PRJEB549	176215	Terrabacteria group	Firmicutes	6.72536	49.5	-	CTED01	13	6241	5459	3/25/15	4/11/17	Scaffold	URMITE	SAMEA3307865	GCA_001368795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/795/GCA_001368795.1_Paenibacillus_reamassiliensis	-	GD6
Stenotrophomonas sp. UBA2118	1947548	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.63961	69.7	-	DCYE01	24	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455338	GCA_002331405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/405/GCA_002331405.1_ASM233140v1	28894102	-
Alcanivorax sp. UBA679	1945998	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.15259	63.9	-	DBNF01	292	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455252	GCA_002297715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/715/GCA_002297715.1_ASM229771v1	28894102	-
Eubacterium sp. CAG:251	1262886	PRJEB787	206686	Terrabacteria group	Firmicutes	1.87386	38.1	-	CBFD01	52	1750	1717	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138726	GCA_000436835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/835/GCA_000436835.1_MGS251	-	-
Janthinobacterium sp. PC23-8	2012679	PRJNA390432	390432	Proteobacteria	Betaproteobacteria	6.3865	62.6	-	NJGY01	12	5585	5384	8/14/17	8/16/17	Scaffold	Geneva College	SAMN07234397	GCA_002250505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/505/GCA_002250505.1_ASM225050v1	-	PC23-8
Caulobacter sp. 39-67-4	1970332	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.10344	66.7	-	NCIV01	1084	2637	2429	8/16/17	8/16/17	Scaffold	None	SAMN06622233	GCA_002282475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/475/GCA_002282475.1_ASM228247v1	-	-
Psychrobacter sp. SHUES1	1849383	PRJNA321378	321378	Proteobacteria	Gammaproteobacteria	3.11559	43.6	-	LXWA01	115	2680	2492	5/25/16	4/12/17	Scaffold	East China Normal University	SAMN04992873	GCA_001652315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/315/GCA_001652315.1_ASM165231v1	-	SHUES1
Acidovorax sp. Leaf84	1736240	PRJNA297956	297956	Proteobacteria	Betaproteobacteria	5.8697	66.9	-	LMMC01	29	5212	5031	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151620	GCA_001422105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/105/GCA_001422105.1_Leaf84	26633631	Leaf84
Marinobacter sp. HL-58	1479237	PRJNA283228	283228	Proteobacteria	Gammaproteobacteria	4.24353	57.6	-	LIHP01	21	3800	3757	10/14/15	6/23/16	Scaffold	Pacific Northwest National Laboratroy	SAMN03785503	GCA_001314605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/605/GCA_001314605.1_ASM131460v1	26497460	-
Erythrobacter sp. REDSEA-S36_B6	1811534	PRJNA289734	289734	Proteobacteria	Alphaproteobacteria	2.93141	63.6	-	LUNS01	99	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534568	GCA_001626455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/455/GCA_001626455.1_ASM162645v1	27377622	-
Nocardioides sp. Soil797	1736413	PRJNA298127	298127	Terrabacteria group	Actinobacteria	4.38636	68.3	-	LMSR01	20	4218	4106	11/2/15	4/11/17	Contig	ETH Zurich	SAMN04155678	GCA_001429555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/555/GCA_001429555.1_Soil797	26633631	Soil797
Methylobacterium sp. Leaf111	1736257	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	5.16623	69.1	-	LMNE01	74	4780	4500	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151637	GCA_001423285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/285/GCA_001423285.1_Leaf111	26633631	Leaf111
Citrobacter sp. AATXR	1779183	PRJNA279609	279609	Proteobacteria	Gammaproteobacteria	5.2025	51.6	-	LUGB01	70	5270	4954	3/10/16	4/12/17	Contig	NHGRI	SAMN03455928	GCA_001586845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/845/GCA_001586845.1_ASM158684v1	-	AATXR
Treponema sp. UBA1240	1947700	PRJNA348753	348753	Spirochaetes	Spirochaetia	2.06501	41.4	-	DBWK01	143	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06455236	GCA_002308875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/875/GCA_002308875.1_ASM230887v1	28894102	-
Novosphingobium sp. 17-62-19	1970406	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	3.81513	61.7	-	NCII01	149	3623	3447	8/16/17	8/16/17	Scaffold	None	SAMN06622246	GCA_002256775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/775/GCA_002256775.1_ASM225677v1	-	-
Lactobacillus sp. Marseille-P3519	1926284	PRJEB18962	361346	Terrabacteria group	Firmicutes	2.23737	45.4	-	FTOY01	11	2091	1985	1/15/17	4/17/17	Contig	URMITE	SAMEA49226668	GCA_900156885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/885/GCA_900156885.1_PRJEB18962	-	Marseille-P3519
Enterococcus sp. HMSC063C12	1739468	PRJNA300118	300118	Terrabacteria group	Firmicutes	2.93921	37.8	-	LTVB01	256	3025	2859	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480389	GCA_001814315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/315/GCA_001814315.1_ASM181431v1	-	HMSC063C12
Prevotella sp. S7-1-8	1284775	PRJNA187471	187471	FCB group	Bacteroidetes/Chlorobi group	2.83893	48.4	-	JRNC01	152	2507	2355	9/26/14	4/9/17	Contig	JCVI	SAMN02850936	GCA_000758925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/925/GCA_000758925.1_04_NF40_HMP1640v01	-	S7-1-8
Pantoea sp. FDAARGOS_194	1975707	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.87711	58.8	-	NWFM01	6	4668	4440	9/19/17	9/21/17	Contig	US Food and Drug Administration 	SAMN04875531	GCA_002313185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/185/GCA_002313185.1_ASM231318v1	-	FDAARGOS_194
Serratia sp. 2880STDY5682894	1805636	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.17639	59.8	-	FCJA01	26	4923	4760	1/21/16	4/11/17	Scaffold	SC	SAMEA2273967	GCA_001537385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/385/GCA_001537385.1_12082_3_2	-	2880STDY5682894
Mycobacterium sp. Soil538	1736391	PRJNA298127	298127	Terrabacteria group	Actinobacteria	5.74766	68.9	-	LMRX01	24	5507	5326	11/2/15	4/11/17	Scaffold	ETH Zurich	SAMN04155656	GCA_001428285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/285/GCA_001428285.1_Soil538	26633631	Soil538
Streptococcus sp. HMSC11C05	1581086	PRJNA269855	269855	Terrabacteria group	Firmicutes	2.05785	35.3	-	LUAC01	28	2089	2005	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03287010	GCA_001807935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/935/GCA_001807935.1_ASM180793v1	-	HMSC11C05
Bradyrhizobium sp. URHD0069	1380355	PRJNA213792	213792	Proteobacteria	Alphaproteobacteria	6.79394	60.7	-	JNIJ01	129	6595	6156	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841140	GCA_000701345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/345/GCA_000701345.1_ASM70134v1	-	URHD0069
Arthrobacter sp. H20	1267981	PRJNA232073	232073	Terrabacteria group	Actinobacteria	3.43676	62.8	-	AZRY01	88	3364	2990	1/14/14	4/9/17	Scaffold	University of Auckland	SAMN02429161	GCA_000520515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/515/GCA_000520515.1_Ah20DRAFT	25649291	H20
Corynebacterium sp. HMSC30G07	1581072	PRJNA269841	269841	Terrabacteria group	Actinobacteria	2.5228	60.6	-	LWOP01	46	2390	2258	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436229	GCA_001806945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/945/GCA_001806945.1_ASM180694v1	-	HMSC30G07
Staphylococcus sp. HMSC078D05	1715118	PRJNA296246	296246	Terrabacteria group	Firmicutes	2.19151	31.3	-	LTJJ01	79	2145	2076	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477519	GCA_001809605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/605/GCA_001809605.1_ASM180960v1	-	HMSC078D05
Enterobacter sp. MGH 33	1329831	PRJNA201948	201948	Proteobacteria	Gammaproteobacteria	5.13352	55.3	-	JCLJ01	5	5025	4755	2/3/14	4/9/17	Scaffold	Broad Institute	SAMN02138573	GCA_000534535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/535/GCA_000534535.1_Ente_cloa_complex_MGH_33_V1	-	MGH 33
Rhodococcus sp. AW25M09	1268303	PRJEB1196	187154	Terrabacteria group	Actinobacteria	5.64203	64.1	-	CAPS01	167	5384	5101	1/22/13	5/19/17	Contig	salmonicida	SAMEA2271987	GCA_000333955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/955/GCA_000333955.1_ASM33395v1	-	AW25M09
Synechococcus sp. WH 8020	32052	PRJNA278997	278997	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.66117	53.1	chromosome:NZ_CP011941.1/CP011941.1	-	1	2814	2725	6/26/15	4/17/17	Chromosome	University of Rhode Island	SAMN03436066	GCA_001040845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/040/845/GCA_001040845.1_ASM104084v1	-	WH 8020
Sphingomonas sp. Leaf29	1736212	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	3.94551	66.9	-	LMKY01	15	3618	3520	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151592	GCA_001422495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/495/GCA_001422495.1_Leaf29	26633631	Leaf29
Clostridium sp. HMSC19C05	1581185	PRJNA269814	269814	Terrabacteria group	Firmicutes	4.06279	28.4	-	LWPD01	69	3731	3623	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436144	GCA_001806645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/645/GCA_001806645.1_ASM180664v1	-	HMSC19C05
Bacillus sp. 2_A_57_CT2	665959	PRJNA40003	40003	Terrabacteria group	Firmicutes	5.88219	40.9	-	ACWD01	43	6035	5665	1/11/11	6/15/17	Scaffold	Broad Institute	SAMN02463787	GCA_000186145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/145/GCA_000186145.1_Bacillus_sp_2_A_57_CT2_V1	-	2_A_57_CT2
Frankia sp. Cg70.9	683313	PRJNA276002	276002	Terrabacteria group	Actinobacteria	4.98659	70.3	-	MSEA01	718	4537	3732	4/18/17	4/21/17	Contig	University of New Hampshire	SAMN03360501	GCA_002099355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/355/GCA_002099355.1_ASM209935v1	-	Cg70.9
Flavobacterium sp. KBS0721	1179672	PRJNA370526	370526	FCB group	Bacteroidetes/Chlorobi group	5.85912	34.1	-	MULJ01	29	4935	4795	2/27/17	3/2/17	Contig	Lennon Lab	SAMN06295817	GCA_002007065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/065/GCA_002007065.1_ASM200706v1	-	KBS0721
Klebsiella sp. NFIX37	1566159	PRJEB16025	348504	Proteobacteria	Gammaproteobacteria	5.28397	58.1	-	FMUK01	22	5213	4976	10/17/16	7/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159426	GCA_900101145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/145/GCA_900101145.1_IMG-taxon_2600255304_annotated_assembly	-	NFIX37
Acinetobacter sp. NIPH 713	1217709	PRJNA183244	183244	Proteobacteria	Gammaproteobacteria	3.04253	43.3	-	APRJ01	12	2884	2732	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01828137	GCA_000369445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/445/GCA_000369445.1_Acin_sp_NIPH_713_V1	-	NIPH 713
Paeniclostridium sordellii	1505	PRJEB8143	277667	Terrabacteria group	Firmicutes	3.4965	27.4	-	CDNR01	36	3381	3293	3/13/15	4/4/17	Contig	WTSI	SAMEA1572079	GCA_001372735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/735/GCA_001372735.1_DA108	-	DA108
Streptomyces sp. 2114.2	1881022	PRJEB16387	349309	Terrabacteria group	Actinobacteria	8.62026	72.1	chromosome I:NZ_LT629768.1/LT629768.1	-	1	7936	7573	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05428941	GCA_900104935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/935/GCA_900104935.1_IMG-taxon_2690315611_annotated_assembly	-	2114.2
Pseudomonas sp. WCS374	1495331	PRJNA245805	245805	Proteobacteria	Gammaproteobacteria	6.08505	60	chromosome:NZ_CP007638.1/CP007638.1	-	1	5608	5418	6/5/14	4/10/17	Chromosome	"Utrecht University, Utrecht, NETHERLANDS"	SAMN02740646	GCA_000698295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/295/GCA_000698295.1_ASM69829v1	-	WCS374
Pseudomonas chlororaphis subsp. chlororaphis	333	PRJNA380114	380114	Proteobacteria	Gammaproteobacteria	6.78303	63	-	NBAT01	35	6191	6027	4/18/17	4/21/17	Contig	Biotechnology Institute	SAMN06627644	GCA_002095925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/925/GCA_002095925.1_ASM209592v1	-	ATCC 9446
Vibrio cyclitrophicus ZF270	1136176	PRJNA81897	81897	Proteobacteria	Gammaproteobacteria	5.18221	43.6	-	AIDR02	45	4553	4313	3/26/12	4/5/17	Scaffold	Massachusetts Institute of Technology	SAMN02470504	GCA_000256465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/465/GCA_000256465.2_ASM25646v2	22491847	ZF270
Elizabethkingia anophelis NUH11	1338017	PRJNA205483	205483	FCB group	Bacteroidetes/Chlorobi group	4.09148	35.6	-	ASYK01	59	3772	3651	11/7/13	4/2/17	Contig	SCELSE	SAMN02470986	GCA_000496055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/055/GCA_000496055.1_NUH11	24012265	NUH11
Salinispora pacifica CNT138	1136421	PRJNA169842	169842	Terrabacteria group	Actinobacteria	5.40881	69.8	-	AZVY01	51	4948	4690	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597229	GCA_000514455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/455/GCA_000514455.1_ASM51445v1	-	CNT138
Leptospira kirschneri serovar Grippotyphosa str. 'Brem 127 Duyster'	1049943	PRJNA74195	74195	Spirochaetes	Spirochaetia	4.26759	35.9	-	AHQA01	263	3846	3531	2/3/12	5/18/17	Scaffold	J. Craig Venter Institute	SAMN00739368	GCA_000246175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/175/GCA_000246175.2_CLC_glsol047	-	Brem 127 Duyster
Piscirickettsia salmonis	1238	PRJNA286205	286205	Proteobacteria	Gammaproteobacteria	3.09115	39.8	-	LELB01	285	3306	2810	6/19/15	4/3/17	Contig	"FAVET-INBIOGEN, Universidad de Chile."	SAMN03766099	GCA_001029935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/935/GCA_001029935.1_ASM102993v1	-	FIUCHILE-89L01
Rhodococcus fascians 04-516	1443890	PRJNA233522	233522	Terrabacteria group	Actinobacteria	5.81643	64.3	-	JMFD01	23	5472	5315	9/30/14	4/2/17	Scaffold	Oregon State University	SAMN02569987	GCA_000760685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/685/GCA_000760685.1_R_fas_04-516	-	04-516
Campylobacter lanienae	75658	PRJNA340999	340999	Proteobacteria	delta/epsilon subdivisions	1.63474	34.7	-	MJJM01	12	1689	1610	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687019	GCA_002139345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/345/GCA_002139345.1_ASM213934v1	28854596	P0104
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28403	32.4	chromosome:AP017590.1	-	1	-	-	1/24/17	1/27/17	Chromosome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053854	GCA_002356935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/935/GCA_002356935.1_ASM235693v1	-	HH06125
Vibrio campbellii	680	PRJNA377806	377806	Proteobacteria	Gammaproteobacteria	5.58814	45.5	-	MWRX01	90	5145	4920	3/15/17	3/17/17	Scaffold	Network Project on Agricultural Bioinformatics and Computational Biology	SAMN06473102	GCA_002027615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/615/GCA_002027615.1_ASM202761v1	-	LB102
Mycobacterium chelonae	1774	PRJNA347845	347845	Terrabacteria group	Actinobacteria	5.00413	64.1	-	MLIU01	102	4898	4766	10/26/16	4/5/17	Contig	University of Georgia	SAMN05898002	GCA_001854015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/015/GCA_001854015.1_ASM185401v1	-	15520
Geobacillus sp. FJAT-46040	2011017	PRJNA390033	390033	Terrabacteria group	Firmicutes	3.36115	51.3	-	NISS01	5	-	-	9/21/17	9/23/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN07212131	GCA_002335725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/725/GCA_002335725.1_ASM233572v1	-	FJAT-46040
Morganella morganii	582	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.9725	51	-	JUYZ01	138	3835	3682	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197841	GCA_001066745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/745/GCA_001066745.1_ASM106674v1	26230489	640_MMOR
Streptococcus sobrinus TCI-352	1074074	PRJNA71917	71917	Terrabacteria group	Firmicutes	2.0988	43.5	-	AGGX01	355	2145	1882	10/6/11	3/30/17	Contig	JCVI	SAMN02436464	GCA_000228225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/225/GCA_000228225.2_SMUT2-NEX_3-352	-	TCI-352
Enterococcus hirae 57-03-H11	1232728	PRJNA175367	175367	Terrabacteria group	Firmicutes	2.793	36.9	-	LGUN01	102	2676	2211	6/30/17	7/3/17	Contig	University of Saskatchewan	SAMN03801246	GCA_002213365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/365/GCA_002213365.1_ASM221336v1	-	57-03-H11
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.61758	66.6	-	LOTX01	129	8013	7568	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449159	GCA_001522525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/525/GCA_001522525.1_ASM152252v1	-	INT1-BP277
Mycobacterium africanum MAL020135	1354187	PRJNA211682	211682	Terrabacteria group	Actinobacteria	4.38875	65.6	-	JKZI01	4	4246	4044	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02231149	GCA_000666985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/985/GCA_000666985.1_Myco_afri_MAL020135_V1	-	MAL020135
Gallibacterium anatis	750	PRJNA217951	217951	Proteobacteria	Gammaproteobacteria	2.54843	40	-	JTJO01	95	2397	2259	7/2/16	4/5/17	Contig	University of Copenhagen	SAMN03220400	GCA_001678565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/565/GCA_001678565.1_Gal27	-	F 279
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96567	64.1	-	FSBC01	22	4908	4744	12/14/16	3/21/17	Contig	SC	SAMEA2068798	GCA_900131885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/885/GCA_900131885.1_10665_4_33	-	288
Aeromonas veronii	654	PRJNA279618	279618	Proteobacteria	Gammaproteobacteria	4.52343	58.9	-	LRBO01	50	4114	3931	4/28/16	4/5/17	Contig	NHGRI	SAMN03455937	GCA_001647435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/435/GCA_001647435.1_ASM164743v1	26888898	AVNIH2
Leuconostoc pseudomesenteroides KCTC 3652	935295	PRJNA61105	61105	Terrabacteria group	Firmicutes	3.24498	38.3	-	AEOQ01	1160	-	-	1/5/11	1/8/14	Contig	Korea Research Institute of Bioscience and Biotechnology	SAMN02470177	GCA_000185065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/065/GCA_000185065.2_ASM18506v1	21705609	KCTC 3652
Klebsiella aerogenes	548	PRJNA322201	322201	Proteobacteria	Gammaproteobacteria	5.56105	54.7887	plasmid pEA77a:NZ_CM004623.1/CM004623.1	LYDO01	37	5593	5294	5/23/16	4/6/17	Scaffold	University of Sao Paulo	SAMN05068064	GCA_001649605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/605/GCA_001649605.2_ASM164960v2	-	Ea77
Xanthomonas perforans	442694	PRJNA276644	276644	Proteobacteria	Gammaproteobacteria	5.1458	64.9	-	JZVR01	103	4717	4346	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03379527	GCA_001009845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/845/GCA_001009845.1_ASM100984v1	26089818	GEV936
Streptococcus pseudopneumoniae	257758	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.89335	40.3	-	JVLX01	72	1862	1746	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197505	GCA_001070815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/815/GCA_001070815.1_ASM107081v1	26230489	315_SPSE
Kingella kingae KK189	1348240	PRJEB4188	209157	Proteobacteria	Betaproteobacteria	1.993	46.6	-	CBRX01	1	1900	1588	9/10/13	4/2/17	Scaffold	URMITE	SAMEA2272164	GCA_000470295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/295/GCA_000470295.1_G114	-	KK189
Vibrio anguillarum	55601	PRJNA267072	267072	Proteobacteria	Gammaproteobacteria	4.17097	44.6891	chromosome I:CP011468.1; chromosome II:CP011469.1; plasmid pJM1:CP016263.1	-	3	3572	3448	2/7/17	2/7/17	Chromosome	University of Copenhagen	SAMN03177549	GCA_001989875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/875/GCA_001989875.1_ASM198987v1	-	LMG12010
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.91426	55.1	-	JUHV01	78	4841	4610	12/16/14	3/25/17	Contig	JCVI	SAMN03012835	GCA_000802695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/695/GCA_000802695.1_SPADES_assembly_of_Enterobacter_cloacae_ND11	-	ND11
Haemophilus parainfluenzae	729	PRJNA327273	327273	Proteobacteria	Gammaproteobacteria	1.87229	39.3	-	MPJJ01	13	1842	1723	1/12/17	4/6/17	Scaffold	Menzies School of Health Research	SAMN06013564	GCA_001949895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/895/GCA_001949895.1_ASM194989v1	-	60884 B Hi-2
Agrobacterium sp. 719_389	1279030	PRJEB21437	391639	Proteobacteria	Alphaproteobacteria	4.91924	59.7	-	FYEM01	18	4707	4551	6/23/17	6/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05661103	GCA_900188475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/475/GCA_900188475.1_IMG-taxon_2521172559_annotated_assembly	-	719_389
Streptococcus parasanguinis	1318	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.13131	42.1	-	JVKP01	54	2039	1944	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197539	GCA_001072435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/435/GCA_001072435.1_ASM107243v1	26230489	349_SPAR
Fusobacterium necrophorum subsp. funduliforme	143387	PRJNA315619	315619	Fusobacteria	Fusobacteriia	2.08466	35.1	-	LVFA01	105	1964	1882	3/25/16	4/5/17	Contig	Aarhus University	SAMN04570268	GCA_001597485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/485/GCA_001597485.1_ASM159748v1	-	F1314
Citrobacter freundii	546	PRJNA252011	252011	Proteobacteria	Gammaproteobacteria	5.33127	51.5	-	JRTA01	157	5342	5086	10/26/15	4/4/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872771	GCA_001413125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/125/GCA_001413125.1_ASM141312v1	25501822	RU2 LB31
Leptospira santarosai	28183	PRJNA257150	257150	Spirochaetes	Spirochaetia	3.89688	41.8	-	JQRI01	203	3879	3565	2/24/16	4/5/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947899	GCA_001568375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/375/GCA_001568375.1_ASM156837v1	26833181	56180
Pantoea ananatis	553	PRJEA68179	68179	Proteobacteria	Gammaproteobacteria	5.11924	53.5	-	CAEJ01	233	4798	4633	8/19/11	5/19/17	Scaffold	Chonnam National University	SAMEA2272043	GCA_000285975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/975/GCA_000285975.1_ASM28597v1	-	B1-9
Riemerella anatipestifer	34085	PRJNA309002	309002	FCB group	Bacteroidetes/Chlorobi group	2.153	35	-	LUDO01	40	2029	1961	6/20/16	4/5/17	Contig	Sichuan Agricultural University	SAMN04419308	GCA_001670855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/670/855/GCA_001670855.1_RCAD0134	-	RCAD0134
Acinetobacter pittii	48296	PRJNA281683	281683	Proteobacteria	Gammaproteobacteria	3.80337	38.7	-	LBHY01	123	3722	3498	5/11/15	4/3/17	Contig	Monash University Malaysia	SAMN03493513	GCA_001005885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/885/GCA_001005885.1_ASM100588v1	-	LC510
Xanthomonas euvesicatoria	456327	PRJNA275486	275486	Proteobacteria	Gammaproteobacteria	5.44372	64.5	-	JZLN01	126	4916	4515	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03349320	GCA_001008815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/815/GCA_001008815.1_v1	26089818	206
Pseudomonas amygdali pv. dendropanacis	235272	PRJNA274691	274691	Proteobacteria	Gammaproteobacteria	6.04924	58.1	-	JYHD01	377	5791	5152	3/2/15	4/3/17	Contig	INRA	SAMN03328997	GCA_000935665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/665/GCA_000935665.1_PDCFBP4219-G1	25931602	CFBP 4219
Brucella sp. CMUL 025	1905698	PRJNA344962	344962	Proteobacteria	Alphaproteobacteria	3.29018	57.2	-	MKPZ01	34	3365	3134	1/6/17	4/16/17	Contig	LAU	SAMN05853701	GCA_001937795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/795/GCA_001937795.1_ASM193779v1	-	CMUL 025
Enterobacter asburiae	61645	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.85054	55.8	-	JUOY01	193	4707	4547	7/10/15	4/3/17	Contig	University of Washington	SAMN03198102	GCA_001059535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/535/GCA_001059535.1_ASM105953v1	26230489	895_ECLO
Helicobacter pylori 26695-1CH	1391728	PRJDB1449	231449	Proteobacteria	delta/epsilon subdivisions	1.6673	38.9	chromosome:NZ_AP013355.1/AP013355.1	-	1	1645	1510	10/2/13	3/25/17	Complete Genome	Oita university	SAMD00061017	GCA_000829135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/135/GCA_000829135.1_ASM82913v1	24233587	26695-1CH
Vibrio alginolyticus	663	PRJNA295761	295761	Proteobacteria	Gammaproteobacteria	5.31973	44.6	-	LJTF01	140	4922	4695	10/5/15	4/4/17	Contig	UC Davis	SAMN04088203	GCA_001306825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/825/GCA_001306825.1_ASM130682v1	-	UCD-32C
Pseudoalteromonas sp. A2	1523412	PRJNA255541	255541	Proteobacteria	Gammaproteobacteria	4.17663	40.1	-	JPMC01	57	3922	3648	8/11/14	4/9/17	Contig	"the First Institute of Ocenography, SOA"	SAMN02925395	GCA_000738935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/935/GCA_000738935.1_ASM73893v1	25212616	A2
Pseudomonas savastanoi pv. glycinea	318	PRJNA285232	285232	Proteobacteria	Gammaproteobacteria	6.04795	57.7	-	LGLL01	144	5551	5068	9/18/15	4/4/17	Scaffold	University of Toronto	SAMN03837734	GCA_001294275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/275/GCA_001294275.1_PgyUnB647	-	UnB647
Pseudomonas syringae pv. tomato	323	PRJNA301753	301753	Proteobacteria	Gammaproteobacteria	6.30909	58.6	-	LNKY01	188	6090	5725	1/19/16	4/4/17	Contig	University of California	SAMN04256406	GCA_001518465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/465/GCA_001518465.1_ASM151846v1	26966221	A9
Achromobacter xylosoxidans	85698	PRJNA319130	319130	Proteobacteria	Betaproteobacteria	6.26198	67.8	-	LYQK01	192	5741	5556	8/18/16	4/5/17	Contig	University of Florida	SAMN04961122	GCA_001707485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/485/GCA_001707485.1_ASM170748v1	-	KCJK1726
Streptococcus oralis subsp. tigurinus 1366	1282665	PRJNA188400	188400	Terrabacteria group	Firmicutes	1.87185	41	-	AORX01	14	1916	1780	3/5/13	4/1/17	Contig	Geneva University Hospitals	SAMN02469809	GCA_000344255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/255/GCA_000344255.1_Streptococcus_tigurinus_1366	23640198	1366
Acinetobacter nosocomialis	106654	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.06566	38.7	-	NGCS01	78	4004	3784	5/15/17	5/23/17	Contig	JCVI	SAMN06837782	GCA_002137075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/075/GCA_002137075.1_ASM213707v1	-	PR365
Klebsiella variicola	244366	PRJNA288761	288761	Proteobacteria	Gammaproteobacteria	5.76699	57.4	-	LGAW01	145	5777	5485	7/28/15	2/21/17	Contig	Memorial University of Newfoundland	SAMN03840749	GCA_001187825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/825/GCA_001187825.1_ASM118782v1	26358587	NL58
Rhodococcus hoagii	43767	PRJNA316970	316970	Terrabacteria group	Actinobacteria	5.37216	68.7	-	LWHU01	37	4983	4862	4/18/17	6/6/17	Contig	The University of Edinburgh	SAMN04632049	GCA_002095035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/035/GCA_002095035.1_ASM209503v1	27638249	PAM1354
Staphylococcus capitis	29388	PRJNA311173	311173	Terrabacteria group	Firmicutes	2.47154	32.8	-	LSLA01	45	2397	2297	5/25/16	4/5/17	Contig	Nofima	SAMN04479466	GCA_001651335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/335/GCA_001651335.1_ASM165133v1	27375578	MF1872
Staphylococcus hominis	1290	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.2798	31.3	-	JWCO01	71	2240	2172	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197072	GCA_001068715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/715/GCA_001068715.1_ASM106871v1	26230489	1118_SHAE
Lactobacillus paracasei subsp. paracasei Lpp22	1256221	PRJNA178450	178450	Terrabacteria group	Firmicutes	2.74911	46.3	-	ANMI01	270	2899	2634	6/11/13	4/1/17	Contig	Danone Research	SAMN02469708	GCA_000410155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/155/GCA_000410155.1_L.paracasei_Lpp22.v.1	23894338	Lpp22
Gardnerella vaginalis	2702	PRJNA272100	272100	Terrabacteria group	Actinobacteria	1.59671	42.9	-	LRQB01	59	1303	1192	2/2/16	4/4/17	Scaffold	The Genome Institute at Washington University	SAMN03851016	GCA_001546485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/485/GCA_001546485.1_ASM154648v1	-	PSS_7772B
Aggregatibacter actinomycetemcomitans serotype a str. H5P1	907486	PRJNA53925	53925	Proteobacteria	Gammaproteobacteria	2.20051	44.3	-	AEJK02	102	2203	2018	9/29/11	4/3/17	Scaffold	University of Southern California School of Dentistry	SAMN02471947	GCA_000226715.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/715/GCA_000226715.3_AaH5P-1v2.0	-	H5P1
Lactobacillus crispatus	47770	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.10336	37	-	LYQX01	71	2169	1963	7/14/17	7/17/17	Contig	University of Minnesota	SAMN04498979	GCA_002218775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/775/GCA_002218775.1_ASM221877v1	-	UMNLC7
Brachyspira hyodysenteriae	159	PRJNA272555	272555	Spirochaetes	Spirochaetia	3.05538	27	-	JXNP01	90	2686	2553	5/26/15	4/3/17	Scaffold	Murdoch University	SAMN03285458	GCA_001013245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/013/245/GCA_001013245.1_ASM101324v1	26098837	ST210
Mycobacterium kansasii	1768	PRJNA374853	374853	Terrabacteria group	Actinobacteria	6.17584	66	-	MWKV01	23	5655	5337	4/11/17	4/11/17	Scaffold	University of Lodz	SAMN06339046	GCA_002086855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/855/GCA_002086855.1_ASM208685v1	-	8MK
Pectobacterium carotovorum subsp. carotovorum ICMP 5702	1267545	PRJNA183435	183435	Proteobacteria	Gammaproteobacteria	4.77446	51.9	-	AODT01	46	4356	4194	6/24/15	4/3/17	Contig	Lincoln University	SAMN03782483	GCA_001039055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/055/GCA_001039055.1_ASM103905v1	26251498	ICMP 5702
Streptococcus equinus	1335	PRJEB16855	351026	Terrabacteria group	Firmicutes	1.87578	37.2	-	FNZS01	11	1808	1743	10/29/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216373	GCA_900109415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/415/GCA_900109415.1_IMG-taxon_2654588151_annotated_assembly	-	H24
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.72439	47.6	-	MEBT01	69	3465	3300	11/18/16	4/5/17	Contig	The University of Queensland	SAMN05200562	GCA_001883025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/025/GCA_001883025.1_ASM188302v1	-	AHL6
Escherichia albertii	208962	PRJDB3047	301492	Proteobacteria	Gammaproteobacteria	4.95854	49.5	-	BBVT01	119	5134	4796	11/6/15	2/25/17	Scaffold	University of Miyazaki	SAMD00026631	GCA_001514865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/865/GCA_001514865.1_ASM151486v1	26537224	E2675
Lactobacillus johnsonii	33959	PRJNA316010	316010	Terrabacteria group	Firmicutes	1.91814	34.4	-	NIBB01	119	1914	1712	8/25/17	8/28/17	Scaffold	University of Minnesota	SAMN04573178	GCA_002269975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/975/GCA_002269975.1_ASM226997v1	-	UMNLJ54
Flavobacterium psychrophilum	96345	PRJNA335403	335403	FCB group	Bacteroidetes/Chlorobi group	2.75595	32.4	-	MIJV01	55	2507	2389	11/28/16	4/5/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05504827	GCA_001887145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/145/GCA_001887145.1_ASM188714v1	-	FPG103
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.56819	67.3	-	LOVB01	133	6922	6528	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449191	GCA_001523225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/225/GCA_001523225.1_ASM152322v1	-	MSMB1146
Propionibacterium freudenreichii	1744	PRJEB6431	270195	Terrabacteria group	Actinobacteria	2.56153	67.3	-	CCYR01	59	2257	2137	12/11/14	4/4/17	Scaffold	INRA STLO	SAMEA2822392	GCA_900000125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/000/125/GCA_900000125.1_CIRM-BIA121	-	CIRM-BIA 121
Aeromonas hydrophila 145	1273135	PRJNA183197	183197	Proteobacteria	Gammaproteobacteria	4.8641	61.5	-	JEMK01	113	4445	4256	3/7/14	4/2/17	Contig	University of Malaya	SAMN02643439	GCA_000586035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/035/GCA_000586035.1_de_novo_assembly	-	145
Pseudomonas stutzeri	316	PRJNA266857	266857	Proteobacteria	Gammaproteobacteria	4.64377	62.7	-	JXJL01	116	4407	4209	4/30/15	4/3/17	Contig	University of Balearic Islands	SAMN03174913	GCA_000982865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/865/GCA_000982865.1_ASM98286v1	26044424	ST-9
Paenibacillus polymyxa	1406	PRJNA243331	243331	Terrabacteria group	Firmicutes	6.41063	45.3	-	LYND01	206	5820	5569	8/18/16	4/5/17	Contig	FDA/CFSAN	SAMN04990134	GCA_001707685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/685/GCA_001707685.1_ASM170768v1	-	CFSAN034343
Vibrio sp. RC586	675815	PRJNA40489	40489	Proteobacteria	Gammaproteobacteria	4.08259	46.5	-	ADBD01	16	3875	3612	11/3/09	4/17/17	Contig	"Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR)"	SAMN02393818	GCA_000176715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/715/GCA_000176715.1_ASM17671v1	-	RC586
Staphylococcus saprophyticus	29385	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.62516	33	-	LNPV01	61	2571	2403	9/28/16	4/10/17	Scaffold	Tufts University	SAMN04244230	GCA_001747175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/175/GCA_001747175.1_ASM174717v1	-	BWH2
Streptococcus sanguinis	1305	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.33603	43.1	-	JUWC01	61	2305	2221	7/10/15	4/3/17	Contig	University of Washington	SAMN03197916	GCA_001074035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/035/GCA_001074035.1_ASM107403v1	26230489	711_SSAN
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.22044	36.7	-	LPRR01	5	2329	2208	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305152	GCA_001560245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/245/GCA_001560245.1_GG12_C01_18	-	GG12-C01-18
Bacillus weihenstephanensis	86662	PRJEB14962	336312	Terrabacteria group	Firmicutes	5.28141	35.5	-	FMBF01	56	5592	5196	8/3/16	6/16/17	Scaffold	INRA-MIG	SAMEA4361530	GCA_900094695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/695/GCA_900094695.1_ASM90009469v1	-	SDA_NFFE664
Bifidobacterium breve MCC 0121	1365960	PRJNA215976	215976	Terrabacteria group	Actinobacteria	2.43634	58.9	-	AVQA01	27	2178	1973	8/11/15	4/3/17	Contig	"Food Science and Technology Institute, Morinaga Milk Industry Co., Ltd"	SAMN03978796	GCA_001264045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/045/GCA_001264045.1_ASM126404v1	26236711	MCC 0121
Helicobacter pylori UM037	1321939	PRJNA196985	196985	Proteobacteria	delta/epsilon subdivisions	1.69279	38.9	chromosome:NC_021217.3/CP005492.3	-	1	1675	1507	5/14/13	3/24/17	Complete Genome	University of Malaya	SAMN02604194	GCA_000392515.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/515/GCA_000392515.3_ASM39251v3	-	UM037
Moraxella catarrhalis	480	PRJNA297370	297370	Proteobacteria	Gammaproteobacteria	1.94245	41.5	-	LXHL01	71	1858	1654	6/3/16	4/5/17	Contig	Drexel University College of Medicine	SAMN04122799	GCA_001656205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/205/GCA_001656205.1_ASM165620v1	26912404	N19
Lactobacillus salivarius	1624	PRJNA321782	321782	Terrabacteria group	Firmicutes	2.17667	32.8	-	LXZM01	146	2233	2051	9/12/17	9/14/17	Contig	Seoul National University	SAMN05003798	GCA_002289665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/665/GCA_002289665.1_ASM228966v1	-	KLF002
Klebsiella oxytoca BRL6-2	1168170	PRJNA185290	185290	Proteobacteria	Gammaproteobacteria	5.80136	55.2	-	ARVT01	1	5497	5279	12/13/13	2/21/17	Contig	DOE Joint Genome Institute	SAMN02597163	GCA_000507385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/507/385/GCA_000507385.1_ASM50738v1	-	BRL6-2
Cronobacter sakazakii	28141	PRJNA251872	251872	Proteobacteria	Gammaproteobacteria	4.66149	56.7	-	JOLW01	77	4543	4307	10/9/15	4/4/17	Scaffold	"Nottingham Trent University, UK"	SAMN02840980	GCA_001309315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/315/GCA_001309315.1_ASM130931v1	26438044	696
Helicobacter pylori 26695	85962	PRJNA175543	175543	Proteobacteria	delta/epsilon subdivisions	1.66789	38.9	chromosome:NC_018939.1/CP003904.1	-	1	1645	1507	10/23/12	3/23/17	Complete Genome	RIPCM	SAMN02603761	GCA_000307795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/795/GCA_000307795.1_ASM30779v1	-	26695
Proteus mirabilis	584	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	3.9554	38.8	-	JTBP01	1	3649	3419	11/14/14	7/6/17	Contig	US Food and Drug Administration 	SAMN02934516	GCA_000783875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/875/GCA_000783875.1_ASM78387v1	-	FDAARGOS_67
Mycoplasma bovis	28903	PRJNA306895	306895	Terrabacteria group	Tenericutes	0.927047	29.3	-	LQEF01	77	801	708	1/4/17	4/6/17	Contig	"University of California, Davis"	SAMN04366527	GCA_001930395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/395/GCA_001930395.1_ASM193039v1	-	2512MB
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.62122	32.7	-	CUFL01	79	2628	2488	3/31/15	3/26/17	Contig	SC	SAMEA1035024	GCA_001226405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/405/GCA_001226405.1_7068_7_19	-	T_621
Propionibacterium acnes HL082PA2	765121	PRJNA49277	49277	Terrabacteria group	Actinobacteria	2.48619	60	-	ADZR01	37	2494	2277	7/28/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189239	GCA_000144105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/105/GCA_000144105.1_ASM14410v1	-	HL082PA2
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.86937	67.1	-	LOXC01	94	6277	5965	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449253	GCA_001524265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/265/GCA_001524265.1_ASM152426v1	-	FL-7-4-30-S2-D0
Burkholderia sp. WSM2232	944436	PRJNA182741	182741	Proteobacteria	Betaproteobacteria	7.20831	63.1	-	AWZV01	72	6361	6130	9/30/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02440791	GCA_000472545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/545/GCA_000472545.1_ASM47254v1	-	WSM2232
Campylobacter coli K3	1412896	PRJNA224706	224706	Proteobacteria	delta/epsilon subdivisions	1.68067	31.3	-	AYKN01	18	1727	1636	12/10/13	3/15/17	Scaffold	University of Exeter	SAMN02384445	GCA_000505605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/605/GCA_000505605.1_K3	25348335	K3
Lactobacillus brevis	1580	PRJNA306257	306257	Terrabacteria group	Firmicutes	2.86378	45.3	-	LPXV01	31	2873	2742	1/17/17	4/6/17	Contig	University of Alberta	SAMN04346868	GCA_001953605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/605/GCA_001953605.1_ASM195360v1	27493201	EF
Mannheimia haemolytica serotype A1/A6 str. PKL10	1450449	PRJNA235217	235217	Proteobacteria	Gammaproteobacteria	2.32421	40	-	JANJ01	11	2258	2043	3/3/14	4/2/17	Contig	Newport Laboratories Ltd.	SAMN02951912	GCA_000584935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/935/GCA_000584935.1_PKL10V1.0	24675846	PKL10
Helicobacter pylori Rif1	1234365	PRJNA175544	175544	Proteobacteria	delta/epsilon subdivisions	1.66788	38.9	chromosome:NC_018937.1/CP003905.1	-	1	1643	1500	10/23/12	3/23/17	Complete Genome	RIPCM	SAMN02603762	GCA_000307815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/815/GCA_000307815.1_ASM30781v1	23833139	Rif1
Serratia marcescens	615	PRJNA388843	388843	Proteobacteria	Gammaproteobacteria	5.24155	59.5	chromosome:NZ_CP021984.1/CP021984.1	-	1	4694	4516	6/22/17	6/24/17	Chromosome	"Assam University, Silchar"	SAMN07187733	GCA_002205475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/475/GCA_002205475.1_ASM220547v1	-	S2I7
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.16462	40	-	FQLQ01	11	1062	961	5/10/17	5/24/17	Contig	WTSI	SAMEA1903258	GCA_900119015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/015/GCA_900119015.1_9471_4_67	-	162STDY5437300
Leuconostoc mesenteroides subsp. cremoris	33965	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.72228	37.9	-	MPAN01	112	1867	1517	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981464	GCA_002092135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/135/GCA_002092135.1_ASM209213v1	28217118	LMGCF02
Anaplasma phagocytophilum	948	PRJEB13033	321622	Proteobacteria	Alphaproteobacteria	1.71862	42.9	-	FLMD02	300	1321	1110	6/2/16	4/5/17	Contig	INRA-MIG	SAMEA4018765	GCA_900088665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/665/GCA_900088665.2_ANAPC5	-	C5
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.18856	41.6	-	JJQU01	263	3636	3410	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708980	GCA_000979265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/265/GCA_000979265.1_gtlEnvA5udCFS	25756680	1.H.M.2.1
Dehalococcoides mccartyi	61435	PRJNA242217	242217	Terrabacteria group	Chloroflexi	1.57151	48.3	-	JGYD01	33	1711	1614	12/4/15	4/4/17	Contig	National University of Singapore	SAMN02691827	GCA_001459095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/459/095/GCA_001459095.1_ASM145909v1	26541266	MB
Lactobacillus gasseri	1596	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.47412	34.5	-	JVEX01	1422	-	-	7/10/15	7/13/16	Scaffold	University of Washington	SAMN03197687	GCA_001063485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/485/GCA_001063485.1_ASM106348v1	26230489	494_LGAS
Yersinia enterocolitica (type O:3) str. YE12/03	1262466	PRJEB665	194496	Proteobacteria	Gammaproteobacteria	4.52824	47	-	CAQG01	1	4225	3933	4/30/13	3/26/17	Scaffold	WTSI	SAMEA3146322	GCA_001050795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/795/GCA_001050795.1_ASM105079v1	-	YE12/03
Helicobacter pylori Rif2	1234600	PRJNA175625	175625	Proteobacteria	delta/epsilon subdivisions	1.66789	38.9	chromosome:NC_018938.1/CP003906.1	-	1	1644	1506	10/23/12	3/23/17	Complete Genome	RIPCM	SAMN02603763	GCA_000307835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/835/GCA_000307835.1_ASM30783v1	23833139	Rif2
Streptococcus gordonii	1302	PRJNA280667	280667	Terrabacteria group	Firmicutes	2.18569	40.5	-	LAYI01	18	2118	2026	3/11/16	4/5/17	Contig	University of Malaya	SAMN03481559	GCA_001589145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/589/145/GCA_001589145.1_ASM158914v1	-	FSS2
[Haemophilus] ducreyi	730	PRJNA270894	270894	Proteobacteria	Gammaproteobacteria	1.66195	38.5	chromosome:CP011225.1	-	1	1640	1453	6/30/15	7/23/15	Chromosome	Indiana University School of Medicine	SAMN03271825	GCA_001043375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/375/GCA_001043375.1_ASM104337v1	-	GU4
Corynebacterium diphtheriae bv. mitis str. ISS 3319	1450520	PRJNA235381	235381	Terrabacteria group	Actinobacteria	2.36609	53.5	-	JAQO01	33	2287	2105	6/5/15	4/3/17	Contig	"Northumbria University, Newcastle"	SAMN02837547	GCA_001026825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/825/GCA_001026825.1_ASM102682v1	26452736	ISS 3319
Sinorhizobium meliloti CIAM1775	1041152	PRJNA78231	78231	Proteobacteria	Alphaproteobacteria	6.71286	62.1	-	ATYH01	108	6718	6220	7/15/13	4/2/17	Scaffold	JGI	SAMN02440595	GCA_000427585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/585/GCA_000427585.1_ASM42758v1	-	CIAM1775
Bordetella bronchiseptica MBORD668	1331225	PRJNA202137	202137	Proteobacteria	Betaproteobacteria	5.14979	68.3	-	JGXM01	59	4849	4736	5/12/14	4/2/17	Contig	JCVI	SAMN02231437	GCA_000689755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/755/GCA_000689755.1_gbb29v01	25908122	MBORD668
Helicobacter pylori Shi169	1163741	PRJNA94507	94507	Proteobacteria	delta/epsilon subdivisions	1.61691	38.9	chromosome:NC_017740.1/CP003473.1	-	1	1595	1456	4/19/12	3/23/17	Complete Genome	"Dept. Molec. Microbiology, Washington University Medical School in Saint Louis"	SAMN02603195	GCA_000277385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/385/GCA_000277385.1_ASM27738v1	-	Shi169
Enterococcus casseliflavus	37734	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.08738	43.1	-	DGNV01	179	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455152	GCA_002389105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/105/GCA_002389105.1_ASM238910v1	28894102	-
Clostridium sporogenes	1509	PRJNA267549	267549	Terrabacteria group	Firmicutes	4.22056	27.8	-	JUYE01	250	4023	3822	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197862	GCA_001058825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/825/GCA_001058825.1_ASM105882v1	26230489	66_CBOT
Fervidobacterium pennivorans DSM 9078	771875	PRJNA60139	60139	Thermotogae	Thermotogae	2.16638	38.9	chromosome:NC_017095.1/CP003260.1	-	1	2017	1930	4/2/12	4/10/17	Complete Genome	DOE Joint Genome Institute	SAMN02232021	GCA_000235405.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/405/GCA_000235405.3_ASM23540v3	-	DSM 9078
Vibrio splendidus	29497	PRJNA318805	318805	Proteobacteria	Gammaproteobacteria	5.5359	44.1	-	MAKF01	162	4930	4763	7/21/16	4/5/17	Scaffold	Massachusetts Institute of Technology	SAMN04867921	GCA_001691275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/275/GCA_001691275.1_ASM169127v1	-	13B01
Lactobacillus rhamnosus R0011	880592	PRJNA51799	51799	Terrabacteria group	Firmicutes	2.90062	46.7	-	AGKC01	10	2948	2780	11/18/11	3/30/17	Contig	Institut Rosell Lallemand Inc.	SAMN02469944	GCA_000235785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/785/GCA_000235785.2_ASM23578v2	22275100	R0011
Pasteurella multocida subsp. multocida VTCCBAA264	1161102	PRJNA89423	89423	Proteobacteria	Gammaproteobacteria	2.28033	40.5	-	ALYC02	78	2175	1980	9/13/12	4/2/17	Contig	"Veterinary Type Culture Collection, NRCE, Sirsa Road, Hisar"	SAMN02470650	GCA_000296345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/345/GCA_000296345.2_ASM29634v2	25081265	VTCCBAA264
[Haemophilus] parasuis	738	PRJNA271652	271652	Proteobacteria	Gammaproteobacteria	2.47296	40.4	-	MOLW01	383	2639	2256	11/14/16	4/5/17	Scaffold	University of Sao Paulo	SAMN05948859	GCA_001877015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/015/GCA_001877015.1_ASM187701v1	-	Hp100/13
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15768	41.2	-	CVZK01	92	2088	1906	6/23/15	3/26/17	Contig	SC	SAMEA1032761	GCA_001175225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/225/GCA_001175225.1_6830_4_82	-	EQUI0227
Bifidobacterium bifidum	1681	PRJEB10915	297013	Terrabacteria group	Actinobacteria	2.15716	62.8	-	CYXQ01	16	1838	1669	10/1/15	4/4/17	Contig	SC	SAMEA3545285	GCA_001405355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/355/GCA_001405355.1_13414_6_61	-	2789STDY5608877
Yersinia frederiksenii	29484	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.87288	47.5	-	CGCB01	84	4493	4323	3/15/15	4/4/17	Scaffold	SC	SAMEA859872	GCA_001319565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/565/GCA_001319565.1_4821_6_6	-	3400/83
Bacillus mycoides	1405	PRJNA293515	293515	Terrabacteria group	Firmicutes	5.73245	35.2	-	LJKG01	115	5896	5578	4/13/16	4/5/17	Scaffold	TIFN	SAMN04046538	GCA_001619505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/505/GCA_001619505.1_ASM161950v1	-	B4117
Comamonas testosteroni	285	PRJNA251509	251509	Proteobacteria	Betaproteobacteria	5.50106	61.5	-	JNVD01	40	5069	4825	8/12/15	4/4/17	Scaffold	Nanyang Technological University	SAMN02848499	GCA_001266835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/835/GCA_001266835.1_ASM126683v1	-	WDL7
Stenotrophomonas maltophilia MF89	1333853	PRJNA202921	202921	Proteobacteria	Gammaproteobacteria	4.64903	66.2	-	ATAP01	209	4276	4144	8/28/13	3/24/17	Contig	University of Illinois at Chicago	SAMN02471816	GCA_000455685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/685/GCA_000455685.1_ASM45568v1	24092793	MF89
Bacillus amyloliquefaciens	1390	PRJDB3066	259717	Terrabacteria group	Firmicutes	3.90857	46	-	BBLH01	8	3993	3762	8/27/14	4/2/17	Scaffold	"Graduate School of Agriculture, Kindai University"	SAMD00019233	GCA_000747705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/705/GCA_000747705.1_ASM74770v1	25323721	CMW1
Bifidobacterium animalis subsp. animalis	302912	PRJNA289613	289613	Terrabacteria group	Actinobacteria	2.01636	60.2	-	NHMR01	3	1701	1562	7/19/17	7/21/17	Contig	Max von Pettenkofer-Institut	SAMN03854118	GCA_002221565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/565/GCA_002221565.1_ASM222156v1	-	YL2
Chlamydia psittaci 03DC29	1112262	PRJNA77097	77097	PVC group	Chlamydiae	1.23552	39.2	-	ATKW01	100	1103	912	6/25/13	4/1/17	Scaffold	University of Maryland School of Medicine	SAMN00860211	GCA_000415665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/665/GCA_000415665.1_ASM41566v1	-	03DC29
Streptococcus thermophilus JIM 8232	1051074	PRJEA68521	68521	Terrabacteria group	Firmicutes	1.9299	38.9	chromosome:NC_017581.1/FR875178.1	-	1	2033	1748	7/4/11	4/11/17	Complete Genome	Institut National de la Recherche Agronomique (INRA)	SAMEA2272807	GCA_000253395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/395/GCA_000253395.1_ASM25339v1	-	JIM 8232
Neisseria gonorrhoeae PID332	528358	PRJNA32803	32803	Proteobacteria	Betaproteobacteria	2.19702	52.3	-	ABZO01	47	2427	2155	12/15/08	4/11/17	Scaffold	Broad Institute	SAMN02595246	GCA_000156935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/935/GCA_000156935.1_ASM15693v1	-	PID332
Streptococcus mutans TCI-153	1074129	PRJNA72009	72009	Terrabacteria group	Firmicutes	1.92765	36.7	-	AGKU01	55	1942	1845	10/6/11	3/22/17	Contig	JCVI	SAMN02436348	GCA_000229065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/065/GCA_000229065.2_SMUT4-NEX_62-153	-	TCI-153
Borrelia garinii IPT90	1408830	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.00623	28.5	-	AYAF01	494	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378797	GCA_000500975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/975/GCA_000500975.1_BorGarIPT90	-	IPT90
Streptococcus dysgalactiae subsp. equisimilis AKSDE4288	452436	PRJNA19975	19975	Terrabacteria group	Firmicutes	2.21755	39.2	-	MCRR01	59	2224	2018	8/13/16	4/5/17	Contig	"Laboratory of Molecular Evolution and Bacterial Pathogenesis, Univ. of Louisville, KY"	SAMN05449652	GCA_001704525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/525/GCA_001704525.1_ASM170452v1	-	AKSDE4288
Methanobrevibacter smithii	2173	PRJNA397915	397915	Euryarchaeota	Methanobacteria	1.92634	30.3	-	NQLD01	16	1837	1727	8/15/17	8/17/17	Contig	University of Illinois	SAMN07492084	GCA_002252585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/585/GCA_002252585.1_ASM225258v1	-	WWM1085
Microcystis aeruginosa CACIAM 03	1885576	PRJNA336078	336078	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.02989	42.9	-	MCIH01	249	4856	4197	8/17/16	8/17/16	Contig	UFPA	SAMN05468009	GCA_001706385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/385/GCA_001706385.1_ASM170638v1	-	-
Enterococcus faecalis TX1346	749516	PRJNA47187	47187	Terrabacteria group	Firmicutes	2.7829	37.6	-	AEBI01	91	2830	2680	8/30/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189126	GCA_000147455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/455/GCA_000147455.1_ASM14745v1	-	TX1346
Brucella suis F12/02	1160229	PRJNA173592	173592	Proteobacteria	Alphaproteobacteria	3.32504	57.2	-	AQLB01	3	3389	3154	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN00811235	GCA_000371165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/165/GCA_000371165.1_Bruc_suis_F12_02_V1	-	F12/02
Clavibacter michiganensis subsp. sepedonicus	31964	PRJNA379075	379075	Terrabacteria group	Actinobacteria	3.36394	72.4	-	MZMM01	5	3213	2995	3/24/17	8/6/17	Contig	Canadian Food Inspection Agency	SAMN06579179	GCA_002240555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/555/GCA_002240555.1_ASM224055v1	-	CFIA-Cs3N
Rhizobium leguminosarum bv. trifolii	386	PRJNA259682	259682	Proteobacteria	Alphaproteobacteria	7.07737	60.9	-	JRXL01	28	6869	6469	10/27/14	4/10/17	Scaffold	AgResearch	SAMN03010502	GCA_000769405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/405/GCA_000769405.1_ASM76940v1	-	CC275e
Treponema pallidum subsp. pallidum	161	PRJNA322283	322283	Spirochaetes	Spirochaetia	1.13907	52.8	chromosome:NZ_CP016049.1/CP016049.1	-	1	1067	965	8/25/16	4/10/17	Chromosome	"National Institute of Health, Portugal"	SAMN05150354	GCA_001712935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/935/GCA_001712935.1_ASM171293v1	-	PT_SIF0908
Borrelia burgdorferi IPT51	1408868	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.19825	28.3	-	AYBR01	111	1223	752	12/3/13	4/2/17	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378835	GCA_000501455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/455/GCA_000501455.1_BorBurgIPT51	-	IPT51
Burkholderia multivorans	87883	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.32192	67.4	-	LPGG01	60	5938	5668	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449506	GCA_001530485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/485/GCA_001530485.1_ASM153048v1	-	MSMB1535WGS
Mycoplasma haemofelis str. Langford 1	941640	PRJEA61503	61503	Terrabacteria group	Tenericutes	1.14726	38.9	chromosome:NC_014970.1/FR773153.2	-	1	1559	1487	1/20/11	8/19/15	Complete Genome	"Centre for Genomic Research, Institute of Integrative Biology, University of Liverpool"	SAMEA2272171	GCA_000200735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/200/735/GCA_000200735.1_ASM20073v1	21317334	Langford 1
Burkholderia thailandensis	57975	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.56846	67.8	-	LOXF01	138	6289	5745	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449257	GCA_001524325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/325/GCA_001524325.1_ASM152432v1	-	E1
Aliivibrio fischeri	668	PRJNA318805	318805	Proteobacteria	Gammaproteobacteria	4.24657	38.4	-	MAJW01	178	3973	3796	7/21/16	4/5/17	Scaffold	Massachusetts Institute of Technology	SAMN04867929	GCA_001691095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/095/GCA_001691095.1_ASM169109v1	-	FF227
Porphyromonas gingivalis	837	PRJEB10280	362716	FCB group	Bacteroidetes/Chlorobi group	2.31266	48.3	-	FUFB01	72	2058	1868	2/2/17	4/6/17	Scaffold	"Melbourne Dental School, University of Melbourne"	SAMEA3505341	GCA_900157215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/215/GCA_900157215.1_Strain_3-3	-	3_3
Helicobacter pylori F16	866344	PRJDA50589	50589	Proteobacteria	delta/epsilon subdivisions	1.5754	38.9	chromosome:NC_017368.1/AP011940.1	-	1	1565	1409	1/8/11	9/18/17	Complete Genome	The University of Tokyo	SAMD00060971	GCA_000270005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/005/GCA_000270005.1_ASM27000v1	"2,121,236,221,575,170"	F16
Lactobacillus fermentum	1613	PRJEB19181	374429	Terrabacteria group	Firmicutes	1.91136	52.3	-	FUHZ01	82	1899	1708	2/11/17	5/24/17	Contig	MICALIS	SAMEA80264668	GCA_900163585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/585/GCA_900163585.1_LFS6	-	S6
Bifidobacterium adolescentis	1680	PRJNA300965	300965	Terrabacteria group	Actinobacteria	2.06169	59.4	-	LNKL01	7	1713	1562	4/24/17	4/26/17	Contig	University of Parma	SAMN04231318	GCA_002108155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/155/GCA_002108155.1_BadoLMG11579v1	27035119	LMG 11579
Vibrio harveyi	669	PRJNA290384	290384	Proteobacteria	Gammaproteobacteria	5.91636	44.9	-	LGYT01	121	5537	5304	8/7/15	4/3/17	Contig	University of Copenhagen	SAMN03890868	GCA_001262745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/745/GCA_001262745.1_ASM126274v1	26383670	VH5
Lactobacillus helveticus	1587	PRJNA399634	399634	Terrabacteria group	Firmicutes	2.01801	36.7	-	NRQX01	392	2205	1558	9/7/17	9/9/17	Contig	Universita' Cattolica del Sacro Cuore	SAMN07542363	GCA_002287645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/645/GCA_002287645.1_ASM228764v1	-	UC1156
Salinispora arenicola CNS299	1288086	PRJNA187934	187934	Terrabacteria group	Actinobacteria	5.74656	69.5	-	AUKM01	63	5153	4846	7/10/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02441150	GCA_000424745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/745/GCA_000424745.1_ASM42474v1	-	CNS299
Lactobacillus casei Lpc-37	1051656	PRJNA68487	68487	Terrabacteria group	Firmicutes	3.07525	46.3	-	AFYU01	150	3152	2920	11/2/12	3/30/17	Contig	"University of Wisconsin-Madison, Utah State University, and Danisco USA Inc."	SAMN02472013	GCA_000309785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/785/GCA_000309785.1_ASM30978v1	23035691	Lpc-37
Coxiella burnetii	777	PRJEB5844	242515	Proteobacteria	Gammaproteobacteria	2.01375	42.5	-	CCAJ01	73	2268	1994	3/25/14	4/2/17	Contig	ANIMAL HEALTH AND VETERINARY LABORATORIES AGENCY	SAMEA3138976	GCA_000612785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/785/GCA_000612785.1_Cb-C2	-	Cb_C2
Helicobacter pylori India7	907238	PRJNA53321	53321	Proteobacteria	delta/epsilon subdivisions	1.67592	38.9	chromosome:NC_017372.1/CP002331.1	-	1	1629	1470	1/6/11	3/22/17	Complete Genome	"Berg lab, Washington University Medical Shool"	SAMN02603026	GCA_000185185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/185/GCA_000185185.1_ASM18518v1	-	India7
Vibrio parahaemolyticus B-265	1238206	PRJNA176641	176641	Proteobacteria	Gammaproteobacteria	5.18944	45.3	-	AZKN01	80	4978	4791	1/8/14	3/18/17	Scaffold	IGS	SAMN02597369	GCA_000516875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/875/GCA_000516875.2_vpB265	-	B-265
Aeromonas salmonicida subsp. salmonicida	29491	PRJNA310296	310296	Proteobacteria	Gammaproteobacteria	4.72814	58.5	-	LSGW01	119	4451	4108	5/13/16	4/5/17	Contig	Universidad Mayor	SAMN04449999	GCA_001643305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/305/GCA_001643305.1_ASM164330v1	-	ATCC 33658
Streptococcus mitis	28037	PRJNA242572	242572	Terrabacteria group	Firmicutes	1.98964	39.8	-	JPFW01	11	2023	1797	7/7/14	4/2/17	Contig	Aarhus University	SAMN02836938	GCA_000722705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/705/GCA_000722705.1_ASM72270v1	25053789	SK642
Oenococcus oeni IOEB_0502	1428412	PRJNA229528	229528	Terrabacteria group	Firmicutes	1.82227	37.9	-	AZKL01	39	1850	1670	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02902415	GCA_000761575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/575/GCA_000761575.1_Oeoe_IOEB_0502_1.0	24901216	IOEB_0502
Helicobacter pylori 35A	585535	PRJNA34603	34603	Proteobacteria	delta/epsilon subdivisions	1.56665	38.9	chromosome:NC_017360.1/CP002096.1	-	1	1566	1411	12/29/10	3/22/17	Complete Genome	Baylor College of Medicine	SAMN02299423	GCA_000178935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/935/GCA_000178935.2_ASM17893v2	-	35A
Campylobacter fetus subsp. testudinum	1507806	PRJNA285170	285170	Proteobacteria	delta/epsilon subdivisions	1.81939	33	-	LFLL01	114	1861	1783	8/5/16	4/5/17	Contig	Utrecht University	SAMN03741803	GCA_001699255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/255/GCA_001699255.1_ASM169925v1	27333878	12S02263-3
Paludibacter propionicigenes WB4	694427	PRJNA42009	42009	FCB group	Bacteroidetes/Chlorobi group	3.6855	38.9	chromosome:NC_014734.1/CP002345.1	-	1	3055	2979	11/23/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00016731	GCA_000183135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/135/GCA_000183135.1_ASM18313v1	21475585	WB4
Leptospira borgpetersenii	174	PRJNA257146	257146	Spirochaetes	Spirochaetia	3.80098	40.3	-	JQQZ01	322	3671	3272	2/24/16	4/4/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947783	GCA_001568295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/295/GCA_001568295.1_ASM156829v1	26833181	56670
Lactobacillus delbrueckii subsp. lactis	29397	PRJEB5824	240976	Terrabacteria group	Firmicutes	1.91073	50	-	CCDT01	10	1928	1670	6/11/14	4/2/17	Scaffold	INRA-MIG	SAMEA2547934	GCA_000751655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/655/GCA_000751655.1_LBCNRZ226_V1	-	-
Yersinia pseudotuberculosis	633	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.74141	47.4	-	CQDI01	93	4444	4169	3/23/15	4/3/17	Contig	SC	SAMEA859911	GCA_001144105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/105/GCA_001144105.1_5139_2_8	-	N912
Brucella abortus	235	PRJNA400357	400357	Proteobacteria	Alphaproteobacteria	3.38058	56.8414	chromosome 1:NZ_CP023221.1/CP023221.1; chromosome 2:NZ_CP023222.1/CP023222.1	-	2	3280	2938	9/12/17	9/14/17	Chromosome	IZSM-Portici	SAMN07572681	GCA_002290785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/785/GCA_002290785.1_ASM229078v1	-	57750
Helicobacter pylori SJM180	765962	PRJNA49025	49025	Proteobacteria	delta/epsilon subdivisions	1.65805	38.9	chromosome:NC_014560.1/CP002073.1	-	1	1617	1478	10/1/10	3/22/17	Complete Genome	"Dept. of Molec. Microbiology, Washington University Medical School, Saint Louis"	SAMN02603202	GCA_000148855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/855/GCA_000148855.1_ASM14885v1	-	SJM180
Streptococcus salivarius	1304	PRJNA320256	320256	Terrabacteria group	Firmicutes	2.17352	39.9	-	LXIF01	122	2068	1938	12/16/16	4/6/17	Contig	State University of Campinas	SAMN04933251	GCA_001906885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/885/GCA_001906885.1_ASM190688v1	-	22-08 S7
Shigella boydii	621	PRJNA293357	293357	Proteobacteria	Gammaproteobacteria	4.48495	50.8	-	LPTE01	414	5170	4286	12/15/16	2/26/17	Contig	"University of Maryland, School of Medicine"	SAMN04001702	GCA_001906055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/055/GCA_001906055.1_ASM190605v1	-	602682
Clostridioides difficile 050-P50-2011	997828	PRJNA64721	64721	Terrabacteria group	Firmicutes	4.22722	28.7	-	AGAB01	65	3894	3796	11/18/11	3/15/17	Scaffold	Washington University Genome Center	SAMN02299445	GCA_000235925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/925/GCA_000235925.1_ASM23592v1	-	050-P50-2011
Helicobacter pylori Cuz20	765964	PRJNA49029	49029	Proteobacteria	delta/epsilon subdivisions	1.63545	38.9	chromosome:NC_017358.1/CP002076.1	-	1	1616	1475	10/1/10	3/22/17	Complete Genome	"Dept. of Molec. Microbiology, Washington University Medical School, Saint Louis"	SAMN02603204	GCA_000148895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/895/GCA_000148895.1_ASM14889v1	-	Cuz20
Candidatus Pelagibacter ubique HIMB058	1144932	PRJNA82953	82953	Proteobacteria	Alphaproteobacteria	1.11505	29.9	-	ATTF01	59	-	-	7/9/13	7/29/15	Contig	JGI	SAMN02440920	GCA_000419545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/545/GCA_000419545.1_ASM41954v1	-	HIMB058
Ralstonia solanacearum	305	PRJEB7427	268815	Proteobacteria	Betaproteobacteria	5.52371	66.6	-	CDMD01	1	5110	4548	1/5/15	4/10/17	Scaffold	CIRAD	SAMEA3137594	GCA_000825825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/825/GCA_000825825.2_CIP417	-	CIP417
Helicobacter pylori 52	684950	PRJNA39507	39507	Proteobacteria	delta/epsilon subdivisions	1.56883	38.9	chromosome:NC_017354.1/CP001680.1	-	1	1549	1390	10/21/09	3/22/17	Complete Genome	Gyeongsang National University College of Medicine and 21c Frontier Human Genome Functional Research Project	SAMN02603357	GCA_000023805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/805/GCA_000023805.1_ASM2380v1	-	52
Corynebacterium glutamicum ATCC 14067	1079988	PRJNA72697	72697	Terrabacteria group	Actinobacteria	3.31108	54.1	-	AGQQ02	2	3193	2988	10/26/11	4/2/17	Contig	South China University of Technology	SAMN02471001	GCA_000233355.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/355/GCA_000233355.3_Corynebacterium_glutamicum_ATCC14067	22247536	ATCC 14067
Bacillus pumilus CCMA-560	1350468	PRJNA209569	209569	Terrabacteria group	Firmicutes	3.84481	41.4	-	AUYP01	72	3990	3862	8/7/13	4/1/17	Contig	University of Campinas	SAMN02471694	GCA_000444805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/805/GCA_000444805.1_B._pumilus	24029758	CCMA-560
Helicobacter pylori Shi470	512562	PRJNA29045	29045	Proteobacteria	delta/epsilon subdivisions	1.60855	38.9	chromosome:NC_010698.2/CP001072.2	-	1	1584	1442	5/14/08	3/22/17	Complete Genome	Washington University Medical School	SAMN02604319	GCA_000020245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/245/GCA_000020245.1_ASM2024v1	-	Shi470
Lactobacillus reuteri JCM 1112	557433	PRJDA19011	19011	Terrabacteria group	Firmicutes	2.03941	38.9	chromosome:NC_010609.1/AP007281.1	-	1	2082	1943	4/16/08	3/29/17	Complete Genome	Kitasato Institute for Life Sciences	SAMD00060920	GCA_000010005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/005/GCA_000010005.1_ASM1000v1	18487258	JCM 1112
Burkholderia cenocepacia D2AES	1165869	PRJNA114707	114707	Proteobacteria	Betaproteobacteria	7.47795	67	-	AXZZ01	339	7205	6645	5/12/14	3/24/17	Contig	Macquarie University	SAMN02769656	GCA_000689595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/595/GCA_000689595.1_D2AESLargecontigs	-	D2AES
Lactobacillus reuteri	1598	PRJNA377846	377846	Terrabacteria group	Firmicutes	2.33353	38.9	-	MWVS01	207	2379	1986	3/14/17	3/16/17	Contig	"Biosearch, S.A."	SAMN06473517	GCA_002027295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/295/GCA_002027295.1_ASM202729v1	-	CECT8605
Streptococcus thermophilus TH1477	1436725	PRJNA231320	231320	Terrabacteria group	Firmicutes	1.88956	38.9296	chromosome chr:NZ_CM003135.1/CM003135.1	AZTJ01	56	2035	1718	2/14/14	4/18/17	Chromosome	University of Padua	SAMN02442661	GCA_000572095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/095/GCA_000572095.1_TH1477VE	24625867	TH1477
Bacteroides fragilis str. 3988 T1	1339288	PRJNA206119	206119	FCB group	Bacteroidetes/Chlorobi group	5.34924	43.5	-	JGCZ01	462	4948	4458	3/20/14	4/18/17	Contig	IGS	SAMN02314428	GCA_000598205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/205/GCA_000598205.1_ASM59820v1	-	3988 T1
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.77951	50.7	-	CXNF01	405	5409	4604	7/16/15	2/24/17	Contig	SC	SAMEA2057215	GCA_001248725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/725/GCA_001248725.1_9870_6_5	-	143100
Lactobacillus reuteri DSM 20016	557436	PRJNA15766	15766	Terrabacteria group	Firmicutes	1.99962	38.9	chromosome:NC_009513.1/CP000705.1	-	1	2049	1917	6/1/07	3/30/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598351	GCA_000016825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/825/GCA_000016825.1_ASM1682v1	-	DSM 20016
Bacillus licheniformis	1402	PRJNA287302	287302	Terrabacteria group	Firmicutes	4.5598	45.6	-	LFIM01	48	4680	4432	7/29/15	4/3/17	Contig	Agricultural Research Organisation	SAMN03780440	GCA_001188525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/525/GCA_001188525.1_ASM118852v1	26430024	S127
Histophilus somni	731	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	1.76285	37	-	LQCX01	63	-	-	1/4/17	1/4/17	Contig	"University of California, Davis"	SAMN04366493	GCA_001929895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/895/GCA_001929895.1_ASM192989v1	-	0090HS
Vibrio vulnificus	672	PRJNA258253	258253	Proteobacteria	Gammaproteobacteria	5.28131	46.4	-	JQDS01	412	4765	4513	8/22/14	4/2/17	Contig	Emek Medical center	SAMN02990648	GCA_000743165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/165/GCA_000743165.1_ASM74316v1	25642229	2322
Pseudomonas syringae pv. actinidiae CH2010-6	1108968	PRJNA75359	75359	Proteobacteria	Gammaproteobacteria	6.19657	58.4	-	AGUH01	342	5932	5443	12/30/11	5/19/17	Scaffold	University of Exeter	SAMN02471733	GCA_000245475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/475/GCA_000245475.1_ASM24547v1	-	CH2010-6
Helicobacter pylori 26695	85962	PRJNA233	233	Proteobacteria	delta/epsilon subdivisions	1.66787	38.9	chromosome:NC_000915.1/AE000511.1	-	1	1555	1445	8/6/97	8/2/16	Complete Genome	TIGR	SAMN02603995	GCA_000008525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/525/GCA_000008525.1_ASM852v1	"92,521,851,047,731,100,000,000"	26695
Acinetobacter baumannii	470	PRJNA380857	380857	Proteobacteria	Gammaproteobacteria	3.9876	38.8976	chromosome:NZ_CP020592.1/CP020592.1; plasmid pUSA2_1:NZ_CP020593.1/CP020593.1	-	2	3825	3637	4/10/17	4/13/17	Complete Genome	Yonsei University College of medicine	SAMN06650241	GCA_002082725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/725/GCA_002082725.1_ASM208272v1	-	USA2
Acinetobacter baumannii	470	PRJEB9585	287776	Proteobacteria	Gammaproteobacteria	3.93626	38.8974	chromosome I:NZ_LN865143.1/LN865143.1; plasmid II:NZ_LN865144.1/LN865144.1	-	2	3704	3550	6/22/15	3/19/17	Complete Genome	CEBITEC	SAMEA3449716	GCA_001457535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/535/GCA_001457535.1_CIP70.10	-	-
Helicobacter pylori F32	102608	PRJDA50593	50593	Proteobacteria	delta/epsilon subdivisions	1.58146	38.8963	chromosome:NC_017366.1/AP011943.1; plasmid pHPF32:NC_017370.1/AP011944.1	-	2	1570	1434	1/8/11	9/18/17	Complete Genome	The University of Tokyo	SAMD00060973	GCA_000270045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/045/GCA_000270045.1_ASM27004v1	"2,121,236,221,575,170"	F32
Bifidobacterium longum subsp. longum CMCC P0001	1266716	PRJNA182967	182967	Terrabacteria group	Actinobacteria	2.42435	59.7	-	APVE01	72	2116	1892	6/4/13	4/1/17	Scaffold	"Shanghai Sine Pharmaceutical Co., Ltd."	SAMN02470970	GCA_000410595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/595/GCA_000410595.1_ASM41059v1	24029762	CMCC P0001
Fusobacterium nucleatum CTI-2	1204475	PRJNA170357	170357	Fusobacteria	Fusobacteriia	2.28495	27.4	-	AXNY01	50	2177	1992	10/22/13	4/2/17	Scaffold	Broad Institute	SAMN02597025	GCA_000479265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/265/GCA_000479265.1_Fuso_nucl_CTI-2_V1	-	CTI-2
Agrobacterium tumefaciens	358	PRJNA355337	355337	Proteobacteria	Alphaproteobacteria	5.49142	59.3	-	MRDG01	22	5358	5135	2/28/17	3/2/17	Contig	"Northeast institute of Geography and Agroecology, Chinese Academy of Sciences"	SAMN06074341	GCA_002008215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/008/215/GCA_002008215.1_ASM200821v1	-	LMG 140
Shigella flexneri K-272	766148	PRJNA49075	49075	Proteobacteria	Gammaproteobacteria	4.51065	50.9	-	AFGX01	71	4967	3947	5/13/11	8/8/17	Contig	Institute for Genome Sciences	SAMN00792444	GCA_000213715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/715/GCA_000213715.2_ASM21371v2	-	K-272
Acinetobacter baumannii TCDC-AB0715	980514	PRJNA62279	62279	Proteobacteria	Gammaproteobacteria	4.21801	38.8947	chromosome:CP002522.2; plasmid p1ABTCDC0715:CP002523.1; plasmid p2ABTCDC0715:CP002524.1	-	3	4010	3956	2/17/11	1/31/14	Complete Genome	Taiwan Centers for Disease Control	SAMN02603891	GCA_000189735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/735/GCA_000189735.2_ASM18973v2	-	TCDC-AB0715
Pseudomonas putida	303	PRJEB19718	377489	Proteobacteria	Gammaproteobacteria	6.20306	61.5	chromosome I:NZ_LT799039.1/LT799039.1	-	1	5772	5517	3/8/17	3/18/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216307	GCA_900167985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/985/GCA_900167985.1_IMG-taxon_2667527229_annotated_assembly	-	KT2440
Xylella fastidiosa	2371	PRJNA258391	258391	Proteobacteria	Gammaproteobacteria	2.52233	51.8	-	JQAP01	16	2349	2166	10/21/14	4/2/17	Contig	"Crop Diseases, Pests, Genetics Research Unit, San Joaquin Valley Agricultural Sciences Center, USDA"	SAMN02997312	GCA_000767565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/565/GCA_000767565.1_ASM76756v1	-	ATCC 35879
Acinetobacter baumannii	470	PRJNA339692	339692	Proteobacteria	Gammaproteobacteria	4.07517	38.8905	chromosome:NZ_CP017656.1/CP017656.1; plasmid unnamed:NZ_CP017657.1/CP017657.1	-	2	3963	3711	10/21/16	3/20/17	Complete Genome	Korea Basic Science Institute	SAMN05601673	GCA_001806485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/485/GCA_001806485.1_ASM180648v1	-	KAB08
Leptospira interrogans serovar Copenhageni str. Fiocruz LV130	996818	PRJNA63733	63733	Spirochaetes	Spirochaetia	4.63946	35	-	AFJW02	157	4175	3780	6/7/11	4/10/17	Contig	J. Craig Venter Institute	SAMN00254991	GCA_000217535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/535/GCA_000217535.2_CA_glsol087	-	Fiocruz LV130
Helicobacter pylori ELS37	1055527	PRJNA69915	69915	Proteobacteria	delta/epsilon subdivisions	1.66988	38.8905	chromosome:NC_017063.1/CP002953.1; plasmid pHPELS37:NC_017064.1/CP002954.1	-	2	1643	1485	3/23/12	3/22/17	Complete Genome	Washington University Med. School	SAMN02604318	GCA_000255955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/955/GCA_000255955.1_ASM25595v1	-	ELS37
Acinetobacter pittii	48296	PRJNA352745	352745	Proteobacteria	Gammaproteobacteria	4.04582	38.8894	chromosome:NZ_CP017938.1/CP017938.1; plasmid unnamed1:NZ_CP017939.1/CP017939.1	-	2	3901	3691	3/3/17	3/6/17	Complete Genome	Yonsei university college of medicine	SAMN05827444	GCA_002012285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/285/GCA_002012285.1_ASM201228v1	-	YMC2010/8/T346
Acinetobacter baumannii	470	PRJNA380857	380857	Proteobacteria	Gammaproteobacteria	4.04931	38.8893	chromosome:NZ_CP020574.1/CP020574.1; plasmid p15A5_1:NZ_CP020573.1/CP020573.1; plasmid p15A5_2:NZ_CP020575.1/CP020575.1	-	3	3916	3685	4/10/17	4/13/17	Complete Genome	Yonsei University College of medicine	SAMN06650264	GCA_002082705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/705/GCA_002082705.1_ASM208270v1	-	15A5
Acinetobacter baumannii ATCC 17978	400667	PRJNA17477	17477	Proteobacteria	Gammaproteobacteria	4.00146	38.8805	chromosome:CP000521.1; plasmid pAB1:CP000522.1; plasmid pAB2:CP000523.1	-	3	3905	3803	3/1/07	1/31/14	Complete Genome	Yale University	SAMN02604331	GCA_000015425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/425/GCA_000015425.1_ASM1542v1	-	ATCC 17978
Leuconostoc citreum KM20	349519	PRJNA16062	16062	Terrabacteria group	Firmicutes	1.89661	38.8804	chromosome:NC_010471.1/DQ489736.1; plasmid pLCK1:NC_010470.1/DQ489740.1; plasmid pLCK2:NC_010466.1/DQ489737.1; plasmid pLCK3:NC_010467.1/DQ489738.1; plasmid pLCK4:NC_010469.1/DQ489739.1	-	5	1915	1776	3/12/08	3/30/17	Complete Genome	Korea Research Institute of Bioscience and Biotechnology (KRIBB)	SAMN02603482	GCA_000026405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/405/GCA_000026405.1_ASM2640v1	18281406	KM20
Proteus mirabilis HI4320	529507	PRJNA12624	12624	Proteobacteria	Gammaproteobacteria	4.0999	38.8761	chromosome:NC_010554.1/AM942759.1; plasmid pHI4320:NC_010555.1/AM942760.1	-	2	3812	3634	4/2/08	5/28/17	Complete Genome	Sanger Institute	SAMEA1705945	GCA_000069965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/069/965/GCA_000069965.1_ASM6996v1	18375554	HI4320
Haemophilus influenzae RdAW	656912	PRJNA39127	39127	Proteobacteria	Gammaproteobacteria	1.80217	38	-	ACSM01	32	1809	1674	9/29/09	3/22/17	Contig	Broad Institute	SAMN02595335	GCA_000175455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/455/GCA_000175455.1_ASM17545v1	-	RdAW
Prochlorococcus marinus str. MIT 9401	167551	PRJNA246696	246696	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.66681	31.2	-	JNAR01	17	1867	1805	9/29/14	4/2/17	Contig	MIT	SAMN02769561	GCA_000760095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/095/GCA_000760095.1_ASM76009v1	25977791	MIT 9401
Mycobacterium bovis BCG str. Phipps	1195467	PRJNA167551	167551	Terrabacteria group	Actinobacteria	4.13147	65.4	-	AKYT01	810	4373	3788	8/30/13	4/2/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control, China"	SAMN02470644	GCA_000463235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/235/GCA_000463235.1_BCG_Phipps	23977002	Phipps
Mycobacterium avium subsp. paratuberculosis Pt144	1029816	PRJNA66643	66643	Terrabacteria group	Actinobacteria	4.58292	69	-	AFPD01	838	4679	3999	6/13/11	5/19/17	Contig	The Commonwealth Scientific and Industrial Research Organisation (CSIRO)	SAMN00222094	GCA_000218055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/055/GCA_000218055.2_ASM21805v2	-	Pt144
Clostridium perfringens	1502	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.32108	28.1	-	CYYX01	48	2980	2858	10/1/15	4/4/17	Contig	SC	SAMEA3545297	GCA_001406415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/415/GCA_001406415.1_13414_6_73	-	2789STDY5608889
Xanthomonas campestris pv. arecae	487849	PRJNA264725	264725	Proteobacteria	Gammaproteobacteria	4.80455	63.3	-	JSBP01	81	4372	3779	10/31/14	4/11/17	Scaffold	University of Exeter	SAMN03140274	GCA_000770355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/355/GCA_000770355.1_NCPPB2649v1	-	NCPPB 2649
Helicobacter pylori G27	563041	PRJNA31341	31341	Proteobacteria	delta/epsilon subdivisions	1.66301	38.8759	chromosome:NC_011333.1/CP001173.1; plasmid pHPG27:NC_011334.1/CP001174.1	-	2	1619	1468	10/3/08	3/22/17	Complete Genome	University of Oregon	SAMN02604237	GCA_000021165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/165/GCA_000021165.1_ASM2116v1	18952803	G27
Helicobacter pylori Puno120	1055528	PRJNA69917	69917	Proteobacteria	delta/epsilon subdivisions	1.63776	38.8758	chromosome:NC_017378.1/CP002980.1; plasmid pHPPN120:NC_017377.1/CP002981.1	-	2	1585	1444	8/26/11	3/22/17	Complete Genome	Washington University Medical School	SAMN02604320	GCA_000224535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/535/GCA_000224535.1_ASM22453v1	-	Puno120
Staphylococcus epidermidis VCU105	904328	PRJNA53739	53739	Terrabacteria group	Firmicutes	2.30061	32.1	-	AFTZ01	30	2285	2143	7/26/11	3/22/17	Contig	J. Craig Venter Institute	SAMN00116831	GCA_000221685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/685/GCA_000221685.2_ASM22168v2	-	VCU105
Helicobacter pylori	210	PRJNA393647	393647	Proteobacteria	delta/epsilon subdivisions	1.58487	38.8746	chromosome:NZ_CP022409.1/CP022409.1; plasmid unnamed1:NZ_CP022410.1/CP022410.1	-	2	1568	1401	7/20/17	7/22/17	Complete Genome	Key Laboratory of Medical microbiology and parasitology of Guizhou Province	SAMN07338981	GCA_002222575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/222/575/GCA_002222575.1_ASM222257v1	-	G272
Helicobacter pylori PeCan4	765963	PRJNA49027	49027	Proteobacteria	delta/epsilon subdivisions	1.63827	38.8681	chromosome:NC_014555.1/CP002074.1; plasmid pHPPC4:NC_014556.1/CP002075.1	-	2	1611	1462	10/1/10	3/22/17	Complete Genome	"Dept. of Molec. Microbiology, Washington University Medical School, Saint Louis"	SAMN02603203	GCA_000148875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/875/GCA_000148875.1_ASM14887v1	-	PeCan4
Pseudomonas fluorescens Q2-87	1038922	PRJNA67535	67535	Proteobacteria	Gammaproteobacteria	6.36817	60.6	chromosome:NZ_CM001558.1/CM001558.1	AGBM01	1	12334	11999	7/27/12	6/15/17	Chromosome	"USDA - Agricultural Research Service, USA"	SAMN02436465	GCA_000281895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/895/GCA_000281895.1_ASM28189v1	22792073	Q2-87
Bartonella tribocorum CIP 105476	382640	PRJNA28109	28109	Proteobacteria	Alphaproteobacteria	2.6424	38.8655	chromosome:NC_010161.1/AM260525.1; plasmid pBT01:NC_010160.1/AM260524.1	-	2	2421	2208	11/25/07	4/7/17	Complete Genome	"Department of Biochemistry and Molecular Biology, Center for Comparative Genomics and Bioinformatics Center for Infectious Disease Dynamics, Penn State University"	SAMEA3138339	GCA_000196435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/435/GCA_000196435.1_ASM19643v1	18037886	type strain:506 = CIP 105476
Acinetobacter baumannii	470	PRJNA311034	311034	Proteobacteria	Gammaproteobacteria	3.98304	38.8603	chromosome:CP014291.1; plasmid unnamed1:CP014292.1; plasmid unnamed2:CP014293.1	-	3	3805	3496	3/2/17	3/2/17	Complete Genome	USAMRIID	SAMN04457967	GCA_002009115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/115/GCA_002009115.1_ASM200911v1	-	AB34299
Acinetobacter calcoaceticus	471	PRJEB6403	251923	Proteobacteria	Gammaproteobacteria	4.12898	38.8495	chromosome 1:NZ_LT605059.1/LT605059.1; plasmid 2:NZ_LT605060.1/LT605060.1	-	2	3977	3791	8/10/16	3/18/17	Complete Genome	SC	SAMEA3310339	GCA_900093475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/475/GCA_900093475.1_36734_D01_2	-	NCTC7364
Helicobacter pylori Lithuania75	907237	PRJNA53323	53323	Proteobacteria	delta/epsilon subdivisions	1.64067	38.8492	chromosome:NC_017362.1/CP002334.1; plasmid unnamed:NC_017363.1/CP002335.1	-	2	1619	1445	1/6/11	3/22/17	Complete Genome	"Berg lab, Washington University Medical School"	SAMN02603023	GCA_000185225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/225/GCA_000185225.1_ASM18522v1	-	Lithuania75
Acinetobacter sp. DUT-2	1809055	PRJNA313514	313514	Proteobacteria	Gammaproteobacteria	4.07267	38.8315	chromosome:CP014651.1; plasmid unnamed1:CP014652.1; plasmid unnamed2:CP014653.1; plasmid unnamed3:CP014654.1; plasmid unnamed4:CP014655.1; plasmid unnamed5:CP014656.1	-	6	3842	3374	3/8/16	3/8/16	Complete Genome	PJ_1_2mM	SAMN04525297	GCA_001581975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/975/GCA_001581975.1_ASM158197v1	-	DUT-2
Acinetobacter baumannii AC30	1224747	PRJNA173033	173033	Proteobacteria	Gammaproteobacteria	3.92286	38.8212	chromosome:CP007577.1; plasmid pAC30a:CP007578.1; plasmid pAC30b:CP007579.1; plasmid pAC30c:CP007580.1	-	4	3729	3660	4/22/14	12/16/16	Complete Genome	Universiti Sultan Zainal Abidin	SAMN02471421	GCA_000307975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/975/GCA_000307975.2_ASM30797v2	-	AC30
Pseudomonas fluorescens R124	743713	PRJNA68653	68653	Proteobacteria	Gammaproteobacteria	6.30049	60.2541	chromosome:NZ_CM001561.1/CM001561.1; plasmid pMP-R124:NZ_CM001562.1/CM001562.1	ALYL01	2	5693	5518	8/23/12	5/24/17	Chromosome	Northern Kentucky University	SAMN02471518	GCA_000292795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/795/GCA_000292795.1_PF-R124.01	-	R124
Weissella jogaejeotgali	1631871	PRJNA299085	299085	Terrabacteria group	Firmicutes	2.14954	38.8049	chromosome:NZ_CP014332.1/CP014332.1; plasmid pFOL01:NZ_CP014333.1/CP014333.1	-	2	2157	1973	1/4/17	4/16/17	Complete Genome	Kyung Hee university	SAMN04193338	GCA_001932615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/615/GCA_001932615.1_ASM193261v1	-	FOL01
Sulfurospirillum sp. JPD-1	220622	PRJNA340224	340224	Proteobacteria	delta/epsilon subdivisions	2.81409	38.8	chromosome:NZ_CP023275.1/CP023275.1	-	1	2882	2793	9/18/17	9/20/17	Complete Genome	Friedrich Schiller University Jena	SAMN07609062	GCA_002309535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/535/GCA_002309535.1_ASM230953v1	-	JPD-1
Staphylococcus epidermidis VCU037	904319	PRJNA53721	53721	Terrabacteria group	Firmicutes	2.44904	32	-	AFTY01	44	2386	2264	7/26/11	3/22/17	Contig	J. Craig Venter Institute	SAMN00116868	GCA_000221705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/705/GCA_000221705.2_ASM22170v2	-	VCU037
Capnocytophaga sputigena	1019	PRJNA369395	369395	FCB group	Bacteroidetes/Chlorobi group	2.85515	38.8	chromosome:NZ_CP022379.1/CP022379.1	-	1	2563	2456	9/14/17	9/16/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06754875	GCA_002302495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/495/GCA_002302495.1_ASM230249v1	-	D1176
Acinetobacter lactucae	1785128	PRJNA360843	360843	Proteobacteria	Gammaproteobacteria	3.98171	38.8	chromosome:NZ_CP020015.1/CP020015.1	-	1	3778	3586	4/3/17	4/5/17	Complete Genome	Center for Genomic Sciences	SAMN06215789	GCA_002076935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/935/GCA_002076935.1_ASM207693v1	-	OTEC-02
Xanthomonas campestris pv. campestris str. CN18	1358019	PRJEB4855	359552	Proteobacteria	Gammaproteobacteria	4.98799	65.2	-	CBVA01	6	4413	4078	12/31/16	4/6/17	Scaffold	Genoscope CEA	SAMEA3158490	GCA_900034305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/305/GCA_900034305.1_20120323	-	CN18
Clostridium perfringens	1502	PRJNA327316	327316	Terrabacteria group	Firmicutes	3.65222	28	-	MARD01	56	3373	3202	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323879	GCA_001949205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/205/GCA_001949205.1_ASM194920v1	28062388	JFP718
Mycobacterium avium subsp. paratuberculosis Pt145	1029817	PRJNA66645	66645	Terrabacteria group	Actinobacteria	4.56886	69	-	AFPE01	916	4660	3954	6/13/11	5/19/17	Contig	The Commonwealth Scientific and Industrial Research Organisation (CSIRO)	SAMN00222095	GCA_000218075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/075/GCA_000218075.2_ASM21807v2	-	Pt145
Mycobacterium bovis BCG str. Prague	1195468	PRJNA167552	167552	Terrabacteria group	Actinobacteria	4.12559	65.3	-	AKYU01	896	4396	3769	8/30/13	4/1/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control, China"	SAMN02470642	GCA_000463255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/255/GCA_000463255.1_BCG_Prague	23977002	Prague
Prochlorococcus marinus str. SB	59926	PRJNA246696	246696	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.66982	31.5	-	JNAS01	4	1830	1767	9/29/14	4/2/17	Contig	MIT	SAMN02769562	GCA_000760115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/115/GCA_000760115.1_ASM76011v1	25977791	SB
Haemophilus influenzae	727	PRJNA240637	240637	Proteobacteria	Gammaproteobacteria	1.79457	38	-	JFZL01	17	1801	1658	4/22/14	3/24/17	Contig	University of British Columbia	SAMN02678121	GCA_000636035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/035/GCA_000636035.1_NTHi584v1	-	584
Veillonella parvula	29466	PRJNA373880	373880	Terrabacteria group	Firmicutes	2.17852	38.8	chromosome:NZ_CP019721.1/CP019721.1	-	1	2013	1923	2/21/17	2/23/17	Complete Genome	Rice University	SAMN06317777	GCA_002005185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/185/GCA_002005185.1_ASM200518v1	-	UTDB1-3
Thalassotalea crassostreae	1763536	PRJNA341534	341534	Proteobacteria	Gammaproteobacteria	3.86167	38.8	chromosome:NZ_CP017689.1/CP017689.1	-	1	3362	3251	10/24/16	4/13/17	Complete Genome	Korea University	SAMN05725820	GCA_001831495.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/495/GCA_001831495.1_ASM183149v1	-	LPB0090
Lactobacillus reuteri	1598	PRJNA317592	317592	Terrabacteria group	Firmicutes	2.04477	38.8	chromosome:NZ_CP015408.2/CP015408.2	-	1	1956	1786	7/20/16	4/17/17	Complete Genome	University of Bern	SAMN04621617	GCA_001688685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/685/GCA_001688685.2_ASM168868v2	-	I49
Helicobacter pylori	210	PRJNA245115	245115	Proteobacteria	delta/epsilon subdivisions	1.61783	38.8	chromosome:NZ_CP011482.1/CP011482.1	-	1	1613	1432	5/27/16	3/28/17	Complete Genome	Veterinary Medicine University of Vienna	SAMN02731779	GCA_001653375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/375/GCA_001653375.1_ASM165337v1	-	L7
Helicobacter pylori	210	PRJNA245115	245115	Proteobacteria	delta/epsilon subdivisions	1.53145	38.8	chromosome:NZ_CP011487.1/CP011487.1	-	1	1523	1353	5/27/16	3/28/17	Complete Genome	Veterinary Medicine University of Vienna	SAMN02731781	GCA_001653475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/475/GCA_001653475.1_ASM165347v1	-	PNG84A
Pedobacter cryoconitis	188932	PRJNA312429	312429	FCB group	Bacteroidetes/Chlorobi group	5.95054	38.8	chromosome:NZ_CP014504.1/CP014504.1	-	1	5070	4929	3/14/16	4/17/17	Complete Genome	Korea Polar Research Institute	SAMN04505864	GCA_001590605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/590/605/GCA_001590605.1_ASM159060v1	-	PAMC 27485
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2755	996819	PRJNA63735	63735	Spirochaetes	Spirochaetia	4.73775	35	-	AFJX02	219	4259	3838	6/7/11	4/10/17	Contig	J. Craig Venter Institute	SAMN00254992	GCA_000217555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/555/GCA_000217555.2_CA_glsol088	-	Fiocruz LV2755
Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)	593275	PRJNA33811	33811	Proteobacteria	Gammaproteobacteria	0.642011	26.3	chromosome:NZ_ACFK01000001.1/ACFK01000001.1	ACFK01	1	621	574	3/2/09	3/14/17	Chromosome	International Aphid Genomics Consortium	SAMN02470818	GCA_000174075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/075/GCA_000174075.1_ASM17407v1	-	LSR1 (Acyrthosiphon pisum)
Xylella fastidiosa	2371	PRJNA269016	269016	Proteobacteria	Gammaproteobacteria	2.54293	51.9667	plasmid unnamed:NZ_CM003178.1/CM003178.1	JUJW01	12	2405	2109	12/29/14	4/3/17	Contig	"National Research Council (C.N.R.), Institute for Sustainable Plant Protection"	SAMN03247589	GCA_000811965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/965/GCA_000811965.1_ASM81196v1	25676759	CoDiRO
Pseudomonas putida	303	PRJNA247591	247591	Proteobacteria	Gammaproteobacteria	5.99714	61.8	-	JUHC01	37	5539	5331	12/9/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02787146	GCA_000799625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/625/GCA_000799625.1_ASM79962v1	-	PD1
Helicobacter pylori	210	PRJNA264984	264984	Proteobacteria	delta/epsilon subdivisions	1.66716	38.8	chromosome:NZ_CP012907.1/CP012907.1	-	1	1643	1445	11/5/15	3/27/17	Complete Genome	Universidad Nacional Autonoma de Mexico	SAMN03144734	GCA_001433495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/495/GCA_001433495.1_ASM143349v1	26769924	29CaP
Shigella flexneri SFJ17B	754092	PRJNA48259	48259	Proteobacteria	Gammaproteobacteria	4.72974	51	-	AFOW01	52	5157	4214	6/10/11	8/8/17	Contig	Institute for Genome Sciences	SAMN00017129	GCA_000217895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/895/GCA_000217895.2_ASM21789v2	-	SFJ17B
Agrobacterium tumefaciens	358	PRJNA381929	381929	Proteobacteria	Alphaproteobacteria	5.38748	59.5	-	NBZF01	33	5247	5014	6/8/17	6/10/17	Contig	Oregon State University	SAMN06693640	GCA_002179795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/795/GCA_002179795.1_ASM217979v1	28569126	LMG 215
Fusobacterium nucleatum CTI-1	1204474	PRJNA170356	170356	Fusobacteria	Fusobacteriia	2.42945	27	-	AXNZ01	8	2354	2214	10/22/13	4/2/17	Scaffold	Broad Institute	SAMN02597026	GCA_000479285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/285/GCA_000479285.1_Fuso_nucl_CTI-1_V1	-	CTI-1
Bifidobacterium longum	216816	PRJNA272123	272123	Terrabacteria group	Actinobacteria	2.37208	60	-	LRPQ01	39	2080	1903	2/2/16	4/5/17	Scaffold	The Genome Institute at Washington University	SAMN03842222	GCA_001546275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/275/GCA_001546275.1_ASM154627v1	-	CMW7750
Proteus vulgaris	585	PRJNA292343	292343	Proteobacteria	Gammaproteobacteria	3.79498	38.8	chromosome:NZ_CP012675.1/CP012675.1	-	1	3478	3200	9/15/15	4/11/17	Complete Genome	Consortium of Clinical Bacterial Genomics	SAMN03968923	GCA_001281565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/565/GCA_001281565.1_ASM128156v1	-	CYPV1
Proteus mirabilis	584	PRJNA292344	292344	Proteobacteria	Gammaproteobacteria	3.793	38.8	chromosome:NZ_CP012674.1/CP012674.1	-	1	3476	3136	9/15/15	4/4/17	Complete Genome	Consortium of Clinical Bacterial Genomics	SAMN03968924	GCA_001281545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/545/GCA_001281545.1_ASM128154v1	-	CYPM1
Helicobacter pylori NY40	1426844	PRJDB1537	251824	Proteobacteria	delta/epsilon subdivisions	1.69692	38.8	chromosome:NZ_AP014523.1/AP014523.1	-	1	1693	1479	6/5/14	3/25/17	Complete Genome	Kochi University	SAMD00061026	GCA_000828955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/955/GCA_000828955.1_ASM82895v1	-	NY40
Helicobacter pylori oki102	1382920	PRJNA215147	215147	Proteobacteria	delta/epsilon subdivisions	1.63321	38.8	chromosome:NZ_CP006820.1/CP006820.1	-	1	1594	1456	3/25/14	3/24/17	Complete Genome	Okinawa Institute of Advanced Sciences	SAMN03081488	GCA_000600045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/045/GCA_000600045.1_ASM60004v1	24744331	oki102
Pseudomonas syringae pv. avellanae str. ISPaVe013	1154761	PRJNA84319	84319	Proteobacteria	Gammaproteobacteria	6.06218	58.9	-	AKCJ01	37	5531	5184	10/4/12	5/19/17	Scaffold	University of Toronto Centre for the Analysis of Genome Evolution and Function	SAMN02471968	GCA_000302795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/795/GCA_000302795.1_Pav013_1.0	22800299	ISPaVe013
Vibrio vulnificus	672	PRJNA263083	263083	Proteobacteria	Gammaproteobacteria	5.0598	46.5	-	JRQR01	281	4796	4383	10/8/14	4/2/17	Contig	Emek Medical center	SAMN03092747	GCA_000764895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/895/GCA_000764895.1_ASM76489v1	25428972	ATCC 33147
Histophilus somni	731	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	1.14424	37.3	-	LQFN01	80	-	-	1/4/17	1/4/17	Scaffold	"University of California, Davis"	SAMN04366561	GCA_001930785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/785/GCA_001930785.1_ASM193078v1	-	3216HS
Bacillus licheniformis LMG 7559	1131732	PRJNA80829	80829	Terrabacteria group	Firmicutes	4.34179	45.8	-	AZSX01	69	4355	4186	1/8/16	4/4/17	Contig	University of Ghent	SAMN04388493	GCA_001507755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/755/GCA_001507755.1_LI7559	26786044	LMG 7559
Helicobacter pylori oki112	1382921	PRJNA215148	215148	Proteobacteria	delta/epsilon subdivisions	1.63793	38.8	chromosome:NZ_CP006821.1/CP006821.1	-	1	1602	1451	3/25/14	3/24/17	Complete Genome	Okinawa Institute of Advanced Sciences	SAMN03081489	GCA_000600085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/085/GCA_000600085.1_ASM60008v1	24744331	oki112
Shigella sonnei	624	PRJEB2075	203826	Proteobacteria	Gammaproteobacteria	4.85107	50.4	-	CXLZ01	438	5476	4643	7/16/15	2/24/17	Contig	SC	SAMEA1560240	GCA_001249535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/535/GCA_001249535.1_8489_2_82	-	44773052
Bacteroides fragilis str. 3996 N(B) 6	1339283	PRJNA206114	206114	FCB group	Bacteroidetes/Chlorobi group	5.65365	43.4	-	JGDA01	298	5243	4809	3/20/14	4/18/17	Contig	IGS	SAMN02314532	GCA_000598225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/225/GCA_000598225.1_ASM59822v1	-	3996 N(B) 6
Streptococcus thermophilus 1F8CT	1435981	PRJNA231319	231319	Terrabacteria group	Firmicutes	1.74694	39.1844	chromosome:NZ_CM003138.1/CM003138.1	AZTK01	60	1897	1542	2/14/14	4/18/17	Chromosome	University of Padua	SAMN02442659	GCA_000836595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/836/595/GCA_000836595.1_1F8CTVE	24625867	1F8CT
Lactobacillus reuteri	1598	PRJNA342243	342243	Terrabacteria group	Firmicutes	2.06498	38.6	-	MIME01	145	2043	1865	5/11/17	5/22/17	Contig	Seoul National University	SAMN05751479	GCA_002128485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/485/GCA_002128485.1_ASM212848v1	-	KLR1001
Burkholderia cenocepacia	95486	PRJNA268776	268776	Proteobacteria	Betaproteobacteria	8.0555	66.6	-	JTLT01	177	7433	7050	1/15/15	3/25/17	Contig	Universidad Autonoma del Estado de Morelos	SAMN03224187	GCA_000818575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/575/GCA_000818575.1_BcenoS511.01	25744996	CEIB S5-1
Helicobacter pylori oki154	1382923	PRJNA215152	215152	Proteobacteria	delta/epsilon subdivisions	1.5997	38.8	chromosome:NZ_CP006823.1/CP006823.1	-	1	1582	1405	3/25/14	3/24/17	Complete Genome	Okinawa Institute of Advanced Sciences	SAMN03081491	GCA_000600145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/145/GCA_000600145.1_ASM60014v1	24744331	oki154
Helicobacter pylori oki422	1382924	PRJNA215149	215149	Proteobacteria	delta/epsilon subdivisions	1.63485	38.8	chromosome:NZ_CP006824.1/CP006824.1	-	1	1594	1430	3/25/14	3/24/17	Complete Genome	Okinawa Institute of Advanced Sciences	SAMN03081492	GCA_000600165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/165/GCA_000600165.1_ASM60016v1	24744331	oki422
Bacillus pumilus INR7	1423688	PRJNA227786	227786	Terrabacteria group	Firmicutes	3.68171	41.3	-	AYTK01	55	3820	3703	12/15/13	4/2/17	Contig	KRIBB	SAMN02414600	GCA_000508145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/145/GCA_000508145.1_INR7_01	25359912	INR7
Corynebacterium glutamicum Z188	1198672	PRJNA168426	168426	Terrabacteria group	Actinobacteria	3.28383	53.9	-	AKXP01	35	3081	2950	7/2/13	4/1/17	Contig	"Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences"	SAMN02471211	GCA_000417765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/765/GCA_000417765.1_ASM41776v1	-	Z188
Helicobacter pylori oki673	1382925	PRJNA215154	215154	Proteobacteria	delta/epsilon subdivisions	1.59506	38.8	chromosome:NZ_CP006825.1/CP006825.1	-	1	1573	1390	3/25/14	3/24/17	Complete Genome	Okinawa Institute of Advanced Sciences	SAMN03081493	GCA_000600185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/185/GCA_000600185.1_ASM60018v1	24744331	oki673
Ralstonia solanacearum	305	PRJEB7428	268816	Proteobacteria	Betaproteobacteria	5.47946	66.4	-	CDLW01	1	5029	4428	1/5/15	4/3/17	Scaffold	CIRAD	SAMEA3137596	GCA_000825845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/845/GCA_000825845.2_Grenada91	-	Grenada 9-1
Candidatus Pelagibacter ubique	198252	PRJEB9287	287342	Proteobacteria	Alphaproteobacteria	0.667038	28.4	-	CVSD01	82	-	-	6/17/15	6/17/15	Contig	UNIVERSITY OF CALIFORNIA - SAN DIEGO	SAMEA3368555	GCA_001179885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/885/GCA_001179885.1_CLC_assembled_contigs	-	SCGC AAA795-C09
Helicobacter pylori oki828	1382926	PRJNA215153	215153	Proteobacteria	delta/epsilon subdivisions	1.60034	38.8	chromosome:NZ_CP006826.1/CP006826.1	-	1	1586	1396	3/25/14	3/24/17	Complete Genome	Okinawa Institute of Advanced Sciences	SAMN03081494	GCA_000600205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/205/GCA_000600205.1_ASM60020v1	24744331	oki828
Clostridioides difficile ATCC 9689 = DSM 1296	1121308	PRJNA205963	205963	Terrabacteria group	Firmicutes	4.21327	28.4	-	AUOX01	30	3952	3823	7/17/13	3/15/17	Scaffold	DOE Joint Genome Institute	SAMN02440800	GCA_000438845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/845/GCA_000438845.1_ASM43884v1	-	DSM 1296
Shigella boydii	621	PRJNA288485	288485	Proteobacteria	Gammaproteobacteria	4.51132	50.9	-	LPTB01	415	5187	4312	12/15/16	2/26/17	Contig	"University of Maryland, School of Medicine"	SAMN04001705	GCA_001906065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/065/GCA_001906065.1_ASM190606v1	-	603150
Streptococcus salivarius	1304	PRJNA320256	320256	Terrabacteria group	Firmicutes	2.25135	39.6	-	LXIG01	388	2217	1949	12/16/16	4/6/17	Contig	State University of Campinas	SAMN04933252	GCA_001906895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/895/GCA_001906895.1_ASM190689v1	-	34-19 S9
Helicobacter pylori oki898	1382927	PRJNA215151	215151	Proteobacteria	delta/epsilon subdivisions	1.63488	38.8	chromosome:NZ_CP006827.1/CP006827.1	-	1	1599	1461	3/25/14	3/24/17	Complete Genome	Okinawa Institute of Advanced Sciences	SAMN03081495	GCA_000600225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/225/GCA_000600225.1_ASM60022v1	24744331	oki898
Brucella abortus	235	PRJNA400357	400357	Proteobacteria	Alphaproteobacteria	3.40231	56.6139	chromosome 1:NZ_CP023227.1/CP023227.1; chromosome 2:NZ_CP023228.1/CP023228.1	-	2	3231	2871	9/12/17	9/14/17	Chromosome	IZSM-Portici	SAMN07572686	GCA_002290805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/805/GCA_002290805.1_ASM229080v1	-	149279
Yersinia pseudotuberculosis	633	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.30424	47.5	-	CPVC01	49	3939	3650	3/23/15	4/3/17	Contig	SC	SAMEA859944	GCA_001155645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/645/GCA_001155645.1_5139_1_10	-	Y722
Lactobacillus delbrueckii subsp. lactis	29397	PRJEB5822	240975	Terrabacteria group	Firmicutes	2.10543	49.8	-	CCDV01	1	2039	1708	6/23/14	4/10/17	Scaffold	INRA-MIG	SAMEA2547921	GCA_000751695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/695/GCA_000751695.2_LBCNRZ327_V11	-	-
Leptospira borgpetersenii	174	PRJNA257146	257146	Spirochaetes	Spirochaetia	3.75021	40.3	-	JQRA01	301	3635	3206	2/24/16	4/5/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947784	GCA_001568305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/305/GCA_001568305.1_ASM156830v1	26833181	56676
Thermotoga profunda AZM34c06	1408160	PRJDB1509	242320	Thermotogae	Thermotogae	2.18761	38.8	chromosome:NZ_AP014510.1/AP014510.1	-	1	2139	2072	3/20/14	4/10/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00061023	GCA_000828675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/675/GCA_000828675.1_ASM82867v1	24676729	AZM34c06
Campylobacter fetus subsp. testudinum	1507806	PRJNA285168	285168	Proteobacteria	delta/epsilon subdivisions	1.76281	33.2	-	LFLM01	99	1788	1715	8/5/16	4/5/17	Contig	Utrecht University	SAMN03741802	GCA_001699265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/265/GCA_001699265.1_ASM169926v1	27333878	12S02842-30
Lactobacillus reuteri TD1	1358027	PRJNA211728	211728	Terrabacteria group	Firmicutes	2.14545	38.8	chromosome:NC_021872.1/CP006603.1	-	1	2037	1890	7/23/13	4/1/17	Complete Genome	University of Florida	SAMN02604178	GCA_000439275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/275/GCA_000439275.1_ASM43927v1	24812223	TD1
Oenococcus oeni IOEB_0608	1428414	PRJNA229531	229531	Terrabacteria group	Firmicutes	1.81261	38	-	AZKJ01	41	1854	1618	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02902413	GCA_000761585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/585/GCA_000761585.1_Oeoe_IOEB_0608_1.0	24901216	IOEB_0608
Streptococcus mitis	28037	PRJNA242567	242567	Terrabacteria group	Firmicutes	2.08079	40	-	JPFY01	16	2072	1868	7/7/14	4/2/17	Contig	Aarhus University	SAMN02836940	GCA_000722755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/755/GCA_000722755.1_ASM72275v1	25053789	SK578
Aeromonas salmonicida subsp. salmonicida	29491	PRJNA310296	310296	Proteobacteria	Gammaproteobacteria	4.69715	58.5	-	LSGX01	122	4421	4065	5/13/16	4/5/17	Contig	Universidad Mayor	SAMN04450000	GCA_001643355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/355/GCA_001643355.1_ASM164335v1	-	J227
Vibrio parahaemolyticus 605	1238200	PRJNA176634	176634	Proteobacteria	Gammaproteobacteria	5.14978	45.3	-	AZGU01	95	4918	4758	1/13/14	3/18/17	Scaffold	IGS	SAMN02597368	GCA_000519365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/365/GCA_000519365.2_vp605	-	605
Helicobacter pylori UM298	1321941	PRJNA196983	196983	Proteobacteria	delta/epsilon subdivisions	1.59454	38.8	chromosome:NC_021882.2/CP006610.2	-	1	1575	1442	7/23/13	3/24/17	Complete Genome	University of Malaya	SAMN02641597	GCA_000439295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/295/GCA_000439295.2_ASM43929v2	23957912	UM298
Coxiella burnetii	777	PRJEB5842	242516	Proteobacteria	Gammaproteobacteria	2.00801	42.5	-	CCAH01	40	2251	1952	3/25/14	4/2/17	Contig	ANIMAL HEALTH AND VETERINARY LABORATORIES AGENCY	SAMEA3138988	GCA_000613025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/025/GCA_000613025.1_Cb-B1	-	Cb_B1
Lactobacillus casei UW4	1051661	PRJNA165565	165565	Terrabacteria group	Firmicutes	2.62883	46.4	-	AQVS01	144	2814	2475	4/20/13	4/1/17	Contig	DOE Joint Genome Institute	SAMN02256476	GCA_000376145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/145/GCA_000376145.1_ASM37614v1	-	UW4
Salinispora arenicola CNS243	1288087	PRJNA187957	187957	Terrabacteria group	Actinobacteria	5.76155	69.6	-	AUKT01	70	5086	4796	7/10/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02441485	GCA_000424885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/885/GCA_000424885.1_ASM42488v1	-	CNS243
Lactobacillus helveticus MTCC 5463	947827	PRJNA62111	62111	Terrabacteria group	Firmicutes	2.04855	36.7	-	AEYL01	593	2303	2239	4/7/11	1/8/14	Contig	"SMC College of Dairy Science, Anand Agricultural University, Anand"	SAMN02470980	GCA_000195355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/355/GCA_000195355.2_ASM19535v2	21705605	MTCC 5463
Vibrio harveyi NBRC 15634 = ATCC 14126	1219071	PRJNA173085	173085	Proteobacteria	Gammaproteobacteria	5.60201	44.9	-	AMCT01	253	5282	4952	8/7/15	4/3/17	Contig	"CIAD, A.C."	SAMN03968604	GCA_001263135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/135/GCA_001263135.1_Vh-14126.1	-	ATCC 14126
Bifidobacterium adolescentis	1680	PRJNA300965	300965	Terrabacteria group	Actinobacteria	2.14679	59.8	-	LNKM01	33	1841	1681	4/24/17	4/26/17	Contig	University of Parma	SAMN04231319	GCA_002108165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/165/GCA_002108165.1_BadoLMG188971	27035119	LMG 18897
Lactobacillus fermentum	1613	PRJEB19182	374430	Terrabacteria group	Firmicutes	1.91521	52.3	-	FUHY01	85	1913	1708	2/11/17	5/31/17	Contig	MICALIS	SAMEA80310418	GCA_900163595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/595/GCA_900163595.1_ASM90016359v1	-	S13
Helicobacter pylori UM032	1311573	PRJNA196982	196982	Proteobacteria	delta/epsilon subdivisions	1.59354	38.8	chromosome:NC_021215.3/CP005490.3	-	1	1572	1441	5/14/13	3/24/17	Complete Genome	University of Malaya	SAMN02230257	GCA_000392455.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/455/GCA_000392455.3_ASM39245v3	23957912	UM032
Porphyromonas gingivalis	837	PRJEB10280	362716	FCB group	Bacteroidetes/Chlorobi group	2.24898	48.4	-	FUFD01	72	1993	1845	2/2/17	4/6/17	Scaffold	"Melbourne Dental School, University of Melbourne"	SAMEA3505343	GCA_900157225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/225/GCA_900157225.1_7BTORR	-	7BTORR
Aliivibrio fischeri	668	PRJNA318805	318805	Proteobacteria	Gammaproteobacteria	4.15367	38.3	-	MAJX01	128	3806	3680	7/21/16	4/5/17	Scaffold	Massachusetts Institute of Technology	SAMN04867926	GCA_001691105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/105/GCA_001691105.1_ASM169110v1	-	ZF73
Burkholderia thailandensis	57975	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.6242	67.8	-	LOXG01	145	6390	5878	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449260	GCA_001524345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/345/GCA_001524345.1_ASM152434v1	-	MSMB60
Clostridium botulinum Prevot_594	1408284	PRJNA222586	222586	Terrabacteria group	Firmicutes	4.33455	27.8456	chromosome:NZ_CP006902.1/CP006902.1; plasmid pCBH:NZ_CP006901.1/CP006901.1	-	2	4166	3925	1/9/15	3/25/17	Chromosome	Los Alamos National Laboratory	SAMN03222821	GCA_000816965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/965/GCA_000816965.1_ASM81696v1	25489752	Prevot_594
Burkholderia multivorans	87883	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.4657	67.2	-	LPGW01	99	6106	5795	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449522	GCA_001530985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/985/GCA_001530985.1_ASM153098v1	-	MSMB1916WGS
Borrelia burgdorferi IPT61	1408870	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.2289	28.2	-	AYBT01	190	1283	652	12/3/13	4/2/17	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378837	GCA_000501475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/475/GCA_000501475.1_BorBurgIPT61	-	IPT61
Treponema pallidum subsp. pallidum	161	PRJNA322283	322283	Spirochaetes	Spirochaetia	1.13914	52.8	chromosome:NZ_CP016050.1/CP016050.1	-	1	1066	1004	8/25/16	4/5/17	Chromosome	"National Institute of Health, Portugal"	SAMN05150355	GCA_001712955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/955/GCA_001712955.1_ASM171295v1	-	PT_SIF0954
Rhizobium leguminosarum	384	PRJNA247552	247552	Proteobacteria	Alphaproteobacteria	6.84239	61.3	-	JUHS01	35	6592	6348	12/9/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02787152	GCA_000799945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/945/GCA_000799945.1_ASM79994v1	-	CF307
Clavibacter michiganensis subsp. insidiosus	33014	PRJNA379081	379081	Terrabacteria group	Actinobacteria	3.38716	72.7	-	MZMO01	3	3278	3061	3/24/17	8/6/17	Contig	Canadian Food Inspection Agency	SAMN06579200	GCA_002240565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/565/GCA_002240565.1_ASM224056v1	-	LMG 3663
Brucella suis F5/05-10	1169236	PRJNA173516	173516	Proteobacteria	Alphaproteobacteria	3.34645	57.2	-	AQIP01	5	3406	3153	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN00839713	GCA_000371185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/185/GCA_000371185.1_Bruc_suis_5_05-10_V1	-	F5/05-10
Enterococcus faecalis TX1342	749515	PRJNA47185	47185	Terrabacteria group	Firmicutes	2.83654	37.5	-	AEBJ01	27	2840	2721	8/30/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189125	GCA_000147475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/475/GCA_000147475.1_ASM14747v1	-	TX1342
Microcystis aeruginosa FCY-27	1163387	PRJNA91061	91061	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.6831	43.2	-	AJUS01	2045	-	-	6/15/17	6/15/17	Contig	Hanyang University	SAMN07248038	GCA_002196405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/405/GCA_002196405.1_MaFCY27-1.0	22814493	FCY-27
Methanobrevibacter smithii TS146C	911120	PRJNA59649	59649	Euryarchaeota	Methanobacteria	1.94748	31.2	-	AELO01	102	-	-	2/17/11	12/6/13	Contig	Washington University in St.Louis	SAMN02436682	GCA_000189875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/875/GCA_000189875.2_ASM18987v2	21317366	TS146C
Streptococcus dysgalactiae subsp. equisimilis	119602	PRJEB19910	379928	Terrabacteria group	Firmicutes	2.12173	40.4	-	FWEH01	317	2046	1866	3/21/17	3/24/17	Contig	HELMHOLTZ CENTER FOR INFECTION RESEARCH	SAMEA103910974	GCA_900169605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/605/GCA_900169605.1_C161SL1	-	-
Borrelia garinii IPT91	1408831	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.11041	28.3	-	AYAG01	563	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378798	GCA_000500995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/995/GCA_000500995.1_BorGarIPT91	-	IPT91
Streptococcus mutans TCI-154	1074130	PRJNA72011	72011	Terrabacteria group	Firmicutes	1.81895	37	-	AGKV01	120	1851	1739	10/6/11	3/22/17	Contig	JCVI	SAMN02436448	GCA_000229085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/085/GCA_000229085.2_SMUT4-NEX_78-154	-	TCI-154
Neisseria gonorrhoeae SK-92-679	528359	PRJNA32805	32805	Proteobacteria	Betaproteobacteria	2.1705	52.4	-	ABZP01	47	2371	2112	12/15/08	4/11/17	Scaffold	Broad Institute	SAMN02595247	GCA_000156955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/955/GCA_000156955.1_ASM15695v1	-	SK-92-679
Helicobacter pylori UM299	1321938	PRJNA196984	196984	Proteobacteria	delta/epsilon subdivisions	1.59457	38.8	chromosome:NC_021216.3/CP005491.3	-	1	1573	1441	5/14/13	3/24/17	Complete Genome	University of Malaya	SAMN02230259	GCA_000392475.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/475/GCA_000392475.3_ASM39247v3	23957912	UM299
Chlamydia psittaci 04DC42	1112265	PRJNA77103	77103	PVC group	Chlamydiae	1.17692	39.1	-	ATKX01	9	1043	984	6/25/13	4/4/17	Scaffold	University of Maryland School of Medicine	SAMN00860213	GCA_000415685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/685/GCA_000415685.2_ASM41568v2	-	04DC42
Bifidobacterium animalis	28025	PRJEB18553	373869	Terrabacteria group	Actinobacteria	1.95436	60.4	-	FTRP01	75	1659	1583	2/8/17	4/6/17	Contig	University of Tromso	SAMEA51820918	GCA_900157045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/045/GCA_900157045.1_Bifido_08_v1	-	-
Bacillus amyloliquefaciens	1390	PRJNA268537	268537	Terrabacteria group	Firmicutes	3.98764	46.4	-	JUDU01	3	3886	3626	1/12/15	4/3/17	Scaffold	"Institute of microbiology, heilongjiang academy sciences"	SAMN03223812	GCA_000817575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/575/GCA_000817575.1_ASM81757v1	-	TF28
Stenotrophomonas maltophilia stmalt0377	1347912	PRJEB3410	215665	Proteobacteria	Gammaproteobacteria	4.62084	66.4	-	CBQT01	120	4357	4152	8/16/13	3/24/17	Contig	IUK	SAMEA3138820	GCA_000499565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/565/GCA_000499565.1_Stmalt0377	-	stmalt0377
Comamonas testosteroni	285	PRJNA298504	298504	Proteobacteria	Betaproteobacteria	5.53006	61.5	-	LMXT01	111	5056	4816	1/26/16	4/4/17	Scaffold	KU Leuven	SAMN04159841	GCA_001541245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/245/GCA_001541245.1_ASM154124v1	-	WDL7
Bacillus mycoides	1405	PRJNA356811	356811	Terrabacteria group	Firmicutes	5.97875	35.1	-	MRWS01	209	6362	5864	5/5/17	6/15/17	Scaffold	University of Groningen	SAMN06127738	GCA_002118205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/118/205/GCA_002118205.1_ASM211820v1	-	SB8
Yersinia frederiksenii	29484	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.80416	46.9	-	CGCC01	42	4357	4171	3/15/15	4/4/17	Scaffold	SC	SAMEA859873	GCA_001319585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/585/GCA_001319585.1_4821_6_7	-	38/83
Bifidobacterium bifidum	1681	PRJNA298114	298114	Terrabacteria group	Actinobacteria	2.28546	62.4	-	LKUR01	33	1952	1778	3/21/16	4/5/17	Contig	N. Blokhina Nizhny Novgorod Research Institute of Epidemiology and Microbiology	SAMN04155634	GCA_001595435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/435/GCA_001595435.1_ASM159543v1	-	791
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15932	41.1	-	CWAD01	68	2111	1931	6/23/15	3/26/17	Contig	SC	SAMEA1032762	GCA_001175245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/245/GCA_001175245.1_6903_3_29	-	EQUI0078
[Haemophilus] parasuis	738	PRJNA301181	301181	Proteobacteria	Gammaproteobacteria	2.32611	39.6	-	MNAL01	109	2247	2050	1/6/17	4/6/17	Scaffold	Chinese Academy of Agricultural Sciences	SAMN04240914	GCA_001938125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/125/GCA_001938125.1_ASM193812v1	-	131
Pasteurella multocida 1500E	1298924	PRJNA191135	191135	Proteobacteria	Gammaproteobacteria	2.21058	40.3	-	AQTL01	265	2142	1940	6/11/13	4/1/17	Contig	Moredun Research Institute	SAMN02470554	GCA_000409915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/915/GCA_000409915.1_1500E	-	1500E
Lactobacillus rhamnosus LRHMDP2	1203258	PRJNA169251	169251	Terrabacteria group	Firmicutes	2.91111	46.6	-	AMQW01	50	2952	2818	11/9/12	3/31/17	Contig	"Westmead Centre for Oral Health and Westmead Millennium  Institute, Westmead Hostpital"	SAMN01737618	GCA_000311945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/945/GCA_000311945.1_ASM31194v1	23405363	LRHMDP2
Vibrio splendidus	29497	PRJNA328102	328102	Proteobacteria	Gammaproteobacteria	5.3633	43.7	-	MKKM01	85	4744	4559	1/28/17	4/6/17	Scaffold	Massachusetts Institute of Technology	SAMN05768149	GCA_001974615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/974/615/GCA_001974615.1_ASM197461v1	-	10N.222.45.F4
Bartonella vinsonii subsp. berkhoffii str. Winnie	1094497	PRJNA73951	73951	Proteobacteria	Alphaproteobacteria	1.8027	38.8	chromosome:NC_020301.1/CP003124.1	-	1	1668	1474	2/20/13	4/8/17	Complete Genome	Uppsala University	SAMN02604271	GCA_000341385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/385/GCA_000341385.1_ASM34138v1	23555299	Winnie
Clostridium sporogenes	1509	PRJNA313949	313949	Terrabacteria group	Firmicutes	4.08809	27.8	-	LUAU01	19	3906	3649	3/25/16	4/10/17	Scaffold	University of Utah	SAMN04526190	GCA_001597905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/905/GCA_001597905.1_ASM159790v1	-	8-O
Enterococcus casseliflavus	37734	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.252	42.8	-	DGRB01	52	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452112	GCA_002389865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/865/GCA_002389865.1_ASM238986v1	28894102	-
Bartonella quintana RM-11	1225179	PRJNA173218	173218	Proteobacteria	Alphaproteobacteria	1.58765	38.8	chromosome:CP003784.1	-	1	1251	1203	9/6/12	1/30/14	Complete Genome	"Beijing Institute of Microbiology and Epidemiology, State Key Laboratory of Pathogen and Biosecurity "	SAMN02603022	GCA_000294715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/715/GCA_000294715.1_ASM29471v1	-	RM-11
Bordetella bronchiseptica MBORD665	1331224	PRJNA202136	202136	Proteobacteria	Betaproteobacteria	5.14709	68.3	-	JGXL01	51	4854	4744	5/12/14	4/2/17	Contig	JCVI	SAMN02231439	GCA_000689775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/775/GCA_000689775.1_gbb28v01	25908122	MBORD665
Sinorhizobium meliloti RRl128	1041156	PRJNA162989	162989	Proteobacteria	Alphaproteobacteria	6.90027	62	-	ATYP01	156	6986	6339	7/15/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02441575	GCA_000427745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/745/GCA_000427745.1_ASM42774v1	-	RRl128
Corynebacterium diphtheriae bv. gravis str. ISS 4746	1450522	PRJNA235383	235383	Terrabacteria group	Actinobacteria	2.37971	53.5	-	JAQP01	53	2299	2119	6/5/15	4/3/17	Contig	"Northumbria University, Newcastle"	SAMN02837549	GCA_001026845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/845/GCA_001026845.1_ASM102684v1	26452736	ISS 4746
[Haemophilus] ducreyi	730	PRJNA270894	270894	Proteobacteria	Gammaproteobacteria	1.62487	38.3	chromosome:CP011226.1	-	1	1574	1422	6/30/15	7/23/15	Chromosome	Indiana University School of Medicine	SAMN03271826	GCA_001043395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/395/GCA_001043395.1_ASM104339v1	-	GU5
Streptococcus gordonii	1302	PRJNA302716	302716	Terrabacteria group	Firmicutes	2.16676	40.5	-	LQWV01	41	2114	2002	2/9/16	4/4/17	Scaffold	TAILORED-Treatment project	SAMN04395146	GCA_001553855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/855/GCA_001553855.1_ASM155385v1	27013051	CCUG 33482
Sulfurospirillum barnesii SES-3	760154	PRJNA63451	63451	Proteobacteria	delta/epsilon subdivisions	2.51011	38.8	chromosome:NC_018002.1/CP003333.1	-	1	2543	2477	6/7/12	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02232056	GCA_000265295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/295/GCA_000265295.1_ASM26529v1	-	SES-3
Yersinia enterocolitica (type O:2) str. YE3094/96	1262467	PRJEB666	194489	Proteobacteria	Gammaproteobacteria	4.6663	47	-	CAQH01	1	4444	3978	4/30/13	3/26/17	Scaffold	WTSI	SAMEA3146323	GCA_001050815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/815/GCA_001050815.1_ASM105081v1	-	YE3094/96
Dehalococcoides mccartyi	61435	PRJNA242211	242211	Terrabacteria group	Chloroflexi	1.32452	47.2	-	JGVX01	6	1415	1339	12/4/15	4/4/17	Contig	National University of Singapore	SAMN02691824	GCA_001460955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/460/955/GCA_001460955.1_ASM146095v1	26541266	11a
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.0826	41.6	-	JJQV01	154	3527	3305	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708939	GCA_000979275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/275/GCA_000979275.1_gtlEnvA5udCFS	25756680	1.H.M.2.2
Anaplasma phagocytophilum	948	PRJEB6582	259954	Proteobacteria	Alphaproteobacteria	1.37082	41.5	-	CCXQ01	169	1092	924	11/1/14	4/4/17	Scaffold	ANSES	SAMEA2781627	GCA_900000025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/000/025/GCA_900000025.1_AnapV1	-	BOV-10_179
Leuconostoc mesenteroides subsp. cremoris	33965	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.66544	38	-	MPAO01	116	1776	1442	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981465	GCA_002092145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/145/GCA_002092145.1_ASM209214v1	28217118	LMGCF03
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.18633	39.7	-	FPLZ01	57	1058	959	5/10/17	5/24/17	Scaffold	WTSI	SAMEA1094338	GCA_900118525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/525/GCA_900118525.1_7067_6_50	-	C22_98
Serratia marcescens LCT-SM213	1162294	PRJNA89607	89607	Proteobacteria	Gammaproteobacteria	5.06733	59.6	-	AJUV01	11	4771	4626	5/22/12	5/19/17	Scaffold	BGI	SAMN02469363	GCA_000264275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/275/GCA_000264275.1_ASM26427v1	22843602	LCT-SM213
Helicobacter pylori Shi417	1163739	PRJNA94345	94345	Proteobacteria	delta/epsilon subdivisions	1.66572	38.8	chromosome:NC_017739.1/CP003472.1	-	1	1622	1490	4/19/12	3/23/17	Complete Genome	"Dept. Molec. Microbiology, Washington University Medical School in Saint Louis"	SAMN02603193	GCA_000277365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/365/GCA_000277365.1_ASM27736v1	-	Shi417
Mannheimia haemolytica	75985	PRJNA181191	181191	Proteobacteria	Gammaproteobacteria	2.42548	41.1	-	LFXW01	107	2429	2221	3/23/16	4/5/17	Contig	Agriculture and Agri-Food Canada	SAMN03840561	GCA_001596555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/555/GCA_001596555.1_ASM159655v1	26926339	T2
Lactobacillus brevis	1580	PRJNA369571	369571	Terrabacteria group	Firmicutes	2.73617	45.3	-	MULL01	10	2770	2445	3/3/17	4/10/17	Contig	Korea University	SAMN06240354	GCA_002017995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/995/GCA_002017995.1_ASM201799v1	-	G101
Campylobacter coli K7	1412897	PRJNA224718	224718	Proteobacteria	delta/epsilon subdivisions	1.79054	31.2	-	AYKO01	34	1879	1782	12/10/13	3/15/17	Scaffold	University of Exeter	SAMN02471735	GCA_000505625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/625/GCA_000505625.1_K7	25348335	K7
Burkholderia sp. JPY366	668820	PRJNA169698	169698	Proteobacteria	Betaproteobacteria	6.78061	63.6	-	AZXJ01	69	6084	5807	1/3/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02597266	GCA_000515195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/195/GCA_000515195.1_ASM51519v1	-	JPY366
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.52111	67.3	-	LOXD01	81	5911	5638	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449254	GCA_001524285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/285/GCA_001524285.1_ASM152428v1	-	FL-7-4-30-S3-D0
Propionibacterium acnes HL002PA2	765116	PRJNA49267	49267	Terrabacteria group	Actinobacteria	2.47576	60.1	-	ADZS01	15	2492	2356	7/28/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189192	GCA_000144125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/125/GCA_000144125.1_ASM14412v1	-	HL002PA2
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.58333	32.5	-	CUDG01	62	2579	2430	3/31/15	3/26/17	Contig	SC	SAMEA1035103	GCA_001226765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/765/GCA_001226765.1_7067_4_48	-	51-21
Mycoplasma bovis	28903	PRJNA306895	306895	Terrabacteria group	Tenericutes	0.936988	29.3	-	LQEO01	71	808	730	1/4/17	4/6/17	Contig	"University of California, Davis"	SAMN04366536	GCA_001930535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/535/GCA_001930535.1_ASM193053v1	-	2612MB
Proteus mirabilis	584	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.10551	38.9	-	JTBW01	1	3855	3625	11/14/14	7/6/17	Contig	US Food and Drug Administration 	SAMN02934509	GCA_000784015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/015/GCA_000784015.1_ASM78401v1	-	FDAARGOS_60
Helicobacter pylori Shi112	1163740	PRJNA94347	94347	Proteobacteria	delta/epsilon subdivisions	1.66346	38.8	chromosome:NC_017741.1/CP003474.1	-	1	1635	1493	4/19/12	3/23/17	Complete Genome	"Dept. Molec. Microbiology, Washington University Medical School in Saint Louis"	SAMN02603194	GCA_000277405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/405/GCA_000277405.1_ASM27740v1	-	Shi112
Cronobacter sakazakii	28141	PRJNA251870	251870	Proteobacteria	Gammaproteobacteria	4.5498	56.8	-	JOLX01	64	4446	4199	10/9/15	4/4/17	Scaffold	"Nottingham Trent University, UK"	SAMN02840979	GCA_001309345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/345/GCA_001309345.1_ASM130934v1	26438044	713
Klebsiella oxytoca KA-2	1256996	PRJNA181051	181051	Proteobacteria	Gammaproteobacteria	5.91976	55.1	-	JAKX01	77	5628	5430	1/31/14	2/21/17	Contig	JCVI	SAMN02641585	GCA_000527215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/215/GCA_000527215.1_KoxKA2v1.0	-	KA-2
Lactobacillus salivarius	1624	PRJNA321782	321782	Terrabacteria group	Firmicutes	2.3669	32.9	-	LXZO01	167	2432	2236	9/12/17	9/14/17	Contig	Seoul National University	SAMN05003796	GCA_002289675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/675/GCA_002289675.1_ASM228967v1	-	KLA006
Moraxella catarrhalis	480	PRJNA297370	297370	Proteobacteria	Gammaproteobacteria	1.9536	41.6	-	LXHI01	41	1844	1667	6/3/16	4/5/17	Contig	Drexel University College of Medicine	SAMN04122802	GCA_001656215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/215/GCA_001656215.1_ASM165621v1	26912404	R4
Helicobacter pylori Puno135	1055529	PRJNA69919	69919	Proteobacteria	delta/epsilon subdivisions	1.64614	38.8	chromosome:NC_017379.1/CP002982.1	-	1	1606	1481	8/26/11	3/22/17	Complete Genome	Washington University Medical School	SAMN02604321	GCA_000224555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/555/GCA_000224555.1_ASM22455v1	-	Puno135
Bifidobacterium breve MCC 1604	1365968	PRJNA215984	215984	Terrabacteria group	Actinobacteria	2.20639	58.7	-	AVQE01	15	1948	1771	8/11/15	4/3/17	Contig	"Food Science and Technology Institute, Morinaga Milk Industry Co., Ltd"	SAMN03978800	GCA_001264155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/155/GCA_001264155.1_ASM126415v1	26236711	MCC 1604
Bacillus weihenstephanensis	86662	PRJEB14962	336312	Terrabacteria group	Firmicutes	5.62048	35.2	-	FMJF01	60	6023	5574	9/8/16	6/16/17	Scaffold	INRA-MIG	SAMEA4361354	GCA_900094995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/995/GCA_900094995.1_ASM90009499v1	-	ADRIA I21
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.21922	36.7	-	LPRS01	8	2334	2176	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305153	GCA_001560275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/275/GCA_001560275.1_GG12_C01_20	-	GG12-C01-20
Streptococcus sanguinis	1305	PRJNA280678	280678	Terrabacteria group	Firmicutes	2.45276	42.9	-	LAWK01	27	2444	2334	3/11/16	4/5/17	Contig	University of Malaya	SAMN03480686	GCA_001588715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/715/GCA_001588715.1_ASM158871v1	-	MB451
Staphylococcus saprophyticus	29385	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.60258	33	-	LMYV01	23	2562	2391	9/28/16	4/5/17	Scaffold	Tufts University	SAMN04244237	GCA_001747225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/225/GCA_001747225.1_ASM174722v1	-	1815
Vibrio sp. N418	701176	PRJNA51213	51213	Proteobacteria	Gammaproteobacteria	4.41066	44.7	-	AFWD01	103	4020	3899	8/4/11	5/19/17	Contig	FDA	SAMN02951900	GCA_000222565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/565/GCA_000222565.2_ASM22256v1	-	N418
Paenibacillus polymyxa	1406	PRJNA243331	243331	Terrabacteria group	Firmicutes	5.7385	45.5	-	LYMX01	188	5129	4881	8/23/16	4/5/17	Contig	FDA/CFSAN	SAMN04990133	GCA_001709075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/075/GCA_001709075.1_ASM170907v1	-	CFSAN034341
Pseudomonas stutzeri	316	PRJNA285410	285410	Proteobacteria	Gammaproteobacteria	4.3413	64.1	-	LDWB01	126	4080	3915	8/31/15	4/4/17	Contig	University of Queensland	SAMN03753647	GCA_001276475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/475/GCA_001276475.1_ASM127647v1	-	C2
Aeromonas hydrophila 226	1268078	PRJNA183200	183200	Proteobacteria	Gammaproteobacteria	5.11106	60.9	-	JEML01	135	4823	4576	3/7/14	4/2/17	Contig	University of Malaya	SAMN02643440	GCA_000586055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/055/GCA_000586055.1_de_novo_assembly	-	226
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.65208	67.2	-	LOVC01	110	6991	6645	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449192	GCA_001523245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/245/GCA_001523245.1_ASM152324v1	-	MSMB1151
Flavobacterium psychrophilum	96345	PRJNA335404	335404	FCB group	Bacteroidetes/Chlorobi group	2.76663	32.4	-	MTBY01	54	2510	2400	5/19/17	5/24/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05504828	GCA_002150145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/145/GCA_002150145.1_ASM215014v1	-	FPG48
Lactobacillus johnsonii	33959	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.85111	34.3	-	DBZO01	28	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06450962	GCA_002311145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/145/GCA_002311145.1_ASM231114v1	28894102	-
Escherichia albertii	208962	PRJDB3047	301492	Proteobacteria	Gammaproteobacteria	4.9976	49.6	-	BBVU01	149	5099	4774	11/6/15	2/25/17	Scaffold	University of Miyazaki	SAMD00026632	GCA_001514885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/885/GCA_001514885.1_ASM151488v1	26537224	EC03-127
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.72241	47.6	-	MEBS01	77	3457	3295	11/18/16	4/5/17	Contig	The University of Queensland	SAMN05200563	GCA_001883035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/035/GCA_001883035.1_ASM188303v1	-	AHL7
Streptococcus equinus	1335	PRJEB16935	351103	Terrabacteria group	Firmicutes	1.82729	37.3	-	FODM01	10	1802	1742	10/29/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488496	GCA_900110365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/365/GCA_900110365.1_IMG-taxon_2623620585_annotated_assembly	-	ES1
Pectobacterium carotovorum subsp. carotovorum UGC32	1267544	PRJNA183436	183436	Proteobacteria	Gammaproteobacteria	4.79774	51.1	-	AODU01	28	4322	4156	6/24/15	4/3/17	Contig	Lincoln University	SAMN03782482	GCA_001039065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/065/GCA_001039065.1_ASM103906v1	26251497	UGC32
Mycobacterium kansasii	1768	PRJNA374853	374853	Terrabacteria group	Actinobacteria	6.51402	65.7	-	MWKW01	24	5813	5478	4/11/17	4/11/17	Scaffold	University of Lodz	SAMN06215600	GCA_002086865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/865/GCA_002086865.1_ASM208686v1	-	NLA001001166
Brachyspira hyodysenteriae	159	PRJNA272555	272555	Spirochaetes	Spirochaetia	3.13016	27	-	JXNS01	187	2787	2633	5/26/15	4/3/17	Scaffold	Murdoch University	SAMN03286869	GCA_001013275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/013/275/GCA_001013275.1_ASM101327v1	26098837	WA100
Lactobacillus crispatus	47770	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.04614	36.9	-	LYRA01	54	2082	1890	7/14/17	7/17/17	Contig	University of Minnesota	SAMN04498982	GCA_002218805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/805/GCA_002218805.1_ASM221880v1	-	UMNLC10
Aggregatibacter actinomycetemcomitans serotype d str. I63B	907487	PRJNA53927	53927	Proteobacteria	Gammaproteobacteria	2.22226	44.3	-	AEJL02	134	2233	2034	9/29/11	4/4/17	Scaffold	University of Southern California School of Dentistry	SAMN02471942	GCA_000226735.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/735/GCA_000226735.3_AaI63Bv2.0	23194436	I63B
Gardnerella vaginalis	2702	PRJNA272122	272122	Terrabacteria group	Actinobacteria	1.60263	38	-	LSRC01	31	1253	1152	2/18/16	4/10/17	Scaffold	The Genome Institute at Washington University	SAMN03851013	GCA_001563665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/665/GCA_001563665.1_ASM156366v1	-	CMW7778B
Lactobacillus paracasei subsp. paracasei Lpp225	1256225	PRJNA178454	178454	Terrabacteria group	Firmicutes	3.08669	46.3	-	ANMM01	74	3232	3012	6/11/13	4/1/17	Contig	Danone Research	SAMN02469715	GCA_000410175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/175/GCA_000410175.1_L.paracasei_Lpp225.v.1	23894338	Lpp225
Staphylococcus hominis	1290	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.26795	31.3	-	JWBV01	89	2229	2160	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197091	GCA_001068725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/725/GCA_001068725.1_ASM106872v1	26230489	1137_SHAE
Staphylococcus capitis	29388	PRJEB8890	317847	Terrabacteria group	Firmicutes	2.4746	32.8	-	CZWH01	26	2406	2301	11/14/15	6/9/17	Contig	Department of Biosecurity PCL3	SAMEA3661573	GCA_900068995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/068/995/GCA_900068995.1_CR07	-	CR07
Rhodococcus hoagii	43767	PRJNA316970	316970	Terrabacteria group	Actinobacteria	5.20246	68.8	-	LWIC01	41	4849	4732	4/18/17	6/6/17	Contig	The University of Edinburgh	SAMN04632002	GCA_002095045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/045/GCA_002095045.1_ASM209504v1	27638249	PAM1271
Klebsiella variicola	244366	PRJEB7831	268465	Proteobacteria	Gammaproteobacteria	5.51056	57.4	-	CXOY01	24	5493	5260	7/24/15	2/21/17	Contig	INSTITUTO NACIONAL DE SALUD	SAMEA3487663	GCA_001261815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/815/GCA_001261815.1_Kv3	-	-
Acinetobacter nosocomialis	106654	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.94897	38.7	-	NGDO01	89	3875	3654	5/15/17	5/23/17	Contig	JCVI	SAMN06837760	GCA_002137515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/515/GCA_002137515.1_ASM213751v1	-	PR324
Streptococcus oralis subsp. tigurinus AZ_3a	1282664	PRJNA188401	188401	Terrabacteria group	Firmicutes	2.18466	40.3	-	AORU01	22	2202	2041	3/5/13	4/1/17	Contig	Geneva University Hospitals	SAMN02469808	GCA_000344275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/275/GCA_000344275.1_Streptococcus_tigurinus_AZ_3a	23640198	AZ_3a
Achromobacter xylosoxidans	85698	PRJNA343957	343957	Proteobacteria	Betaproteobacteria	6.5071	67.6	-	MJMO01	61	5937	5783	1/19/17	4/6/17	Contig	University Laval	SAMN05806719	GCA_001957045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/957/045/GCA_001957045.1_ASM195704v1	-	U400
Pseudomonas syringae pv. tomato	323	PRJNA301754	301754	Proteobacteria	Gammaproteobacteria	6.26107	58.6	-	LNKZ01	192	6050	5674	1/19/16	4/4/17	Contig	University of California	SAMN04256407	GCA_001518695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/695/GCA_001518695.1_ASM151869v1	26966221	407
Pseudomonas savastanoi pv. fraxini	360922	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	6.02392	58	-	LLJL01	481	5651	5155	12/30/15	4/4/17	Scaffold	University of Toronto	SAMN03976404	GCA_001483545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/483/545/GCA_001483545.1_PfrICMP7711	-	ICMP7711
Pseudoalteromonas sp. ND6B	1535421	PRJNA258174	258174	Proteobacteria	Gammaproteobacteria	4.23644	40.4	-	JQFL01	90	3881	3606	10/6/14	4/9/17	Contig	Oak Ridge National Lab	SAMN02989440	GCA_000764215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/215/GCA_000764215.1_ASM76421v1	25428968	ND6B
Vibrio alginolyticus	663	PRJNA295764	295764	Proteobacteria	Gammaproteobacteria	5.20447	44.6	-	LJTG01	76	4784	4570	10/5/15	4/4/17	Contig	UC Davis	SAMN04088219	GCA_001306845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/845/GCA_001306845.1_ASM130684v1	-	UCD-53C
Lactococcus garvieae ATCC 49156	420889	PRJDA18705	18705	Terrabacteria group	Firmicutes	1.95013	38.8	chromosome:NC_015930.1/AP009332.1	-	1	1985	1858	8/10/11	3/30/17	Complete Genome	Kitasato Institute for Life Sciences	SAMD00060911	GCA_000269925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/925/GCA_000269925.1_ASM26992v1	21829716	ATCC 49156
Enterobacter asburiae	61645	PRJNA285410	285410	Proteobacteria	Gammaproteobacteria	4.92101	55.7	-	LDVX01	243	4910	4660	8/31/15	4/4/17	Contig	University of Queensland	SAMN03753642	GCA_001276465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/465/GCA_001276465.1_ASM127646v1	-	C7
Brucella sp. CMUL 003	1905694	PRJNA344953	344953	Proteobacteria	Alphaproteobacteria	3.29077	57.2	-	MKPV01	37	3363	3127	1/6/17	4/16/17	Contig	LAU	SAMN05853576	GCA_001937805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/805/GCA_001937805.1_ASM193780v1	-	CMUL 003
Pseudomonas amygdali pv. dendropanacis	235272	PRJNA274667	274667	Proteobacteria	Gammaproteobacteria	5.73998	58.1	-	JYHG01	247	5445	4841	3/2/15	4/3/17	Contig	INRA	SAMN03328994	GCA_000935735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/735/GCA_000935735.1_PSDCFBP3226-G1	25931602	CFBP 3226
Xanthomonas euvesicatoria	456327	PRJNA275494	275494	Proteobacteria	Gammaproteobacteria	5.32156	64.5	-	JZLV01	115	4791	4384	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03349328	GCA_001008825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/825/GCA_001008825.1_v1	26089818	515
Acinetobacter pittii	48296	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.9871	38.8	-	JVLG01	220	3870	3674	7/10/15	4/3/17	Contig	University of Washington	SAMN03197522	GCA_001056355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/355/GCA_001056355.1_ASM105635v1	26230489	332_ABCC
Riemerella anatipestifer	34085	PRJNA299094	299094	FCB group	Bacteroidetes/Chlorobi group	2.10396	35	-	LUDS01	24	1974	1910	6/20/16	4/5/17	Contig	Sichuan Agricultural University	SAMN04395147	GCA_001670865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/670/865/GCA_001670865.1_ASM167086v1	-	RCAD0131
Pantoea ananatis	553	PRJNA259615	259615	Proteobacteria	Gammaproteobacteria	4.7564	53.8	-	JQZZ01	177	4504	4232	10/10/14	4/2/17	Scaffold	Huazhong Agricultural University	SAMN03009826	GCA_000766045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/766/045/GCA_000766045.1_ASM76604v1	-	PaMB1
Leptospira santarosai	28183	PRJNA257150	257150	Spirochaetes	Spirochaetia	3.90226	41.9	-	JQRG01	210	3965	3620	2/24/16	4/5/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947895	GCA_001569265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/265/GCA_001569265.1_ASM156926v1	26833181	56163
Citrobacter freundii	546	PRJNA252011	252011	Proteobacteria	Gammaproteobacteria	5.33041	51.5	-	JRTC01	163	5341	5079	10/26/15	4/4/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872773	GCA_001413155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/155/GCA_001413155.1_ASM141315v1	25501822	RU2 LB33
Fusobacterium necrophorum subsp. funduliforme	143387	PRJNA315619	315619	Fusobacteria	Fusobacteriia	2.11269	35.1	-	LVFD01	45	2053	1944	3/25/16	4/5/17	Contig	Aarhus University	SAMN04570271	GCA_001597525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/525/GCA_001597525.1_ASM159752v1	-	F1353
Streptococcus parasanguinis	1318	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.12151	41.7	-	JVEE01	54	2105	1973	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197706	GCA_001073155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/155/GCA_001073155.1_ASM107315v1	26230489	512_SPAR
Agrobacterium sp. SCN 61-19	1660088	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	4.47502	61.4	-	MEDN01	47	4304	4198	9/13/16	9/13/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03652433	GCA_001724035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/035/GCA_001724035.1_ASM172403v1	26031303	-
Haemophilus parainfluenzae	729	PRJNA327106	327106	Proteobacteria	Gammaproteobacteria	1.88335	39.5	-	MKXX01	12	-	-	12/22/16	12/22/16	Scaffold	None	SAMN05509309	GCA_001914055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/055/GCA_001914055.1_ASM191405v1	-	-
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.97557	55.2	-	JUHW01	76	4930	4677	12/16/14	3/25/17	Contig	JCVI	SAMN03012830	GCA_000802705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/705/GCA_000802705.1_SPADES_assembly_of_Enterobacter_cloacae_ND12	-	ND12
Vibrio anguillarum	55601	PRJNA267170	267170	Proteobacteria	Gammaproteobacteria	4.00249	44.6723	chromosome I:CP011472.1; chromosome II:CP011473.1	-	2	3479	3399	2/7/17	2/7/17	Chromosome	University of Copenhagen	SAMN03178169	GCA_001989895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/895/GCA_001989895.1_ASM198989v1	-	S2 2/9
Kingella kingae KK75	1305774	PRJEB1626	194487	Proteobacteria	Betaproteobacteria	1.99281	46.6	-	CBTD01	1	1902	1625	9/11/13	4/2/17	Scaffold	URMITE	SAMEA2272652	GCA_000470335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/335/GCA_000470335.1_KK75	-	KK75
Streptococcus pseudopneumoniae	257758	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.93934	39.9	-	JVQA01	183	1905	1785	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197398	GCA_001071735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/735/GCA_001071735.1_ASM107173v1	26230489	205_SPSE
Xanthomonas perforans	442694	PRJNA276641	276641	Proteobacteria	Gammaproteobacteria	5.11757	64.9	-	JZVP01	69	4650	4306	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03379525	GCA_001009855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/855/GCA_001009855.1_ASM100985v1	26089818	GEV915
Klebsiella aerogenes	548	PRJNA390761	390761	Proteobacteria	Gammaproteobacteria	5.26295	55.1	-	NJBB01	103	5188	4918	6/21/17	6/24/17	Scaffold	University of Houston	SAMN07249743	GCA_002204605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/605/GCA_002204605.1_ASM220460v1	-	PX01
Aeromonas veronii bv. veronii	197701	PRJNA345311	345311	Proteobacteria	Gammaproteobacteria	4.51126	58.9	-	MRZR01	56	4170	3908	12/19/16	4/6/17	Contig	Masaryk University	SAMN05860752	GCA_001908535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/535/GCA_001908535.1_ASM190853v1	-	CCM 4359
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98824	64.1	-	FVDZ01	21	4947	4802	3/10/17	3/18/17	Contig	SC	SAMEA2071368	GCA_900131955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/955/GCA_900131955.1_10665_4_40	-	295
Gallibacterium anatis	750	PRJNA393058	393058	Proteobacteria	Gammaproteobacteria	2.5444	40	-	NLFL01	55	2411	2193	8/22/17	8/24/17	Contig	BUAP-UNAM	SAMN07327628	GCA_002263255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/255/GCA_002263255.1_ASM226325v1	-	SV200
Mycobacterium africanum MAL020136	1354141	PRJNA211683	211683	Terrabacteria group	Actinobacteria	4.39778	65.5	-	JKZH01	4	4247	4029	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02231150	GCA_000667005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/005/GCA_000667005.1_Myco_tube_MAL020136_V1	-	MAL020136
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.73902	66.5	-	LOUB01	124	8116	7665	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449163	GCA_001522575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/575/GCA_001522575.1_ASM152257v1	-	INT3-BP101
Enterococcus hirae 57-09-G6	1232727	PRJNA175366	175366	Terrabacteria group	Firmicutes	2.91495	36.7	-	LGUO01	98	2789	2219	6/30/17	7/3/17	Contig	University of Saskatchewan	SAMN03801248	GCA_002213385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/385/GCA_002213385.1_ASM221338v1	-	57-09-G6
Streptococcus sobrinus TCI-355	1074076	PRJNA71919	71919	Terrabacteria group	Firmicutes	2.07035	43.5	-	AGGY01	227	2031	1853	10/6/11	3/30/17	Contig	JCVI	SAMN02436536	GCA_000228245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/245/GCA_000228245.2_SMUT2-NEX_5-355	-	TCI-355
Morganella morganii	582	PRJNA288592	288592	Proteobacteria	Gammaproteobacteria	3.98264	50.5	-	LFWB01	313	3869	3547	8/26/15	4/4/17	Scaffold	MSU	SAMN03813741	GCA_001274995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/274/995/GCA_001274995.1_ASM127499v1	26450735	TW17014
Lactococcus garvieae Lg2	420890	PRJDA18707	18707	Terrabacteria group	Firmicutes	1.96396	38.8	chromosome:NC_017490.1/AP009333.1	-	1	2001	1867	8/10/11	3/30/17	Complete Genome	Kitasato Institute for Life Sciences	SAMD00060912	GCA_000269945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/945/GCA_000269945.1_ASM26994v1	21829716	Lg2
Mycobacterium chelonae	1774	PRJNA347845	347845	Terrabacteria group	Actinobacteria	5.26746	63.9	-	MLIV01	109	5165	5020	10/26/16	4/5/17	Contig	University of Georgia	SAMN05898003	GCA_001854035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/035/GCA_001854035.1_ASM185403v1	-	Trumpetfish
Vibrio campbellii PEL22A	1126217	PRJNA78919	78919	Proteobacteria	Gammaproteobacteria	5.06425	45.4	-	AHYY01	319	-	-	3/8/12	1/8/14	Contig	Federal University of Rio de Janeiro	SAMN02471382	GCA_000252345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/345/GCA_000252345.2_ASM25234v2	22535939	PEL22A
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28403	32.4	chromosome:AP017589.1	-	1	-	-	1/24/17	1/27/17	Chromosome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053855	GCA_002356955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/955/GCA_002356955.1_ASM235695v1	-	HH06116
Campylobacter lanienae	75658	PRJNA341000	341000	Proteobacteria	delta/epsilon subdivisions	1.54456	34.6	-	MJJN01	20	1595	1523	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687020	GCA_002139375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/375/GCA_002139375.1_ASM213937v1	28854596	P0121
Rhodococcus fascians	1828	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.95056	64.4	-	NPFO01	41	5637	5478	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07414580	GCA_002258705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/705/GCA_002258705.1_ASM225870v1	-	15-508-1b
Piscirickettsia salmonis LF-89 = ATCC VR-1361	1227812	PRJNA174046	174046	Proteobacteria	Gammaproteobacteria	3.02912	40.1	-	AMFF02	284	2843	2606	9/17/12	4/2/17	Scaffold	Fraunhofer Chile Research Center for Systems Biotechnology Bio-Computing Division	SAMN02469792	GCA_000297215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/215/GCA_000297215.2_ASM29721v2	-	LF-89
Leptospira kirschneri serovar Valbuzzi str. Brem 179	1049969	PRJNA74207	74207	Spirochaetes	Spirochaetia	4.3108	35.9	-	AHQG01	321	3887	3544	2/3/12	5/18/17	Scaffold	J. Craig Venter Institute	SAMN00739374	GCA_000246295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/295/GCA_000246295.2_CLC_glsol056	-	Brem 179
Salinispora pacifica CNT131	1136420	PRJNA169841	169841	Terrabacteria group	Actinobacteria	5.52707	69.9	-	AZVZ01	113	5074	4709	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597230	GCA_000514475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/475/GCA_000514475.1_ASM51447v1	-	CNT131
Elizabethkingia anophelis	1117645	PRJEB5243	244391	FCB group	Bacteroidetes/Chlorobi group	4.03206	35.5	-	CCAC01	89	3695	3584	4/10/14	4/2/17	Contig	INSTITUT PASTEUR	SAMEA3139014	GCA_000689515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/515/GCA_000689515.1_E27107v1_PRJEB5243	-	Po0527107
Vibrio cyclitrophicus FF160	1136164	PRJNA81873	81873	Proteobacteria	Gammaproteobacteria	5.19114	43.5	-	AIDF02	109	4604	4396	3/26/12	4/5/17	Scaffold	Massachusetts Institute of Technology	SAMN02470462	GCA_000256605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/605/GCA_000256605.2_ASM25660v2	22491847	FF160
Pseudomonas chlororaphis	587753	PRJEB15108	347745	Proteobacteria	Gammaproteobacteria	6.97211	62.7	-	FMCZ01	22	6406	6205	10/10/16	5/31/17	Contig	OAK RIDGE NATIONAL LABORATORY	SAMEA4378487	GCA_900095245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/245/GCA_900095245.1_ASM90009524v1	-	-
Pseudomonas sp. MT-1	150396	PRJDB2890	265065	Proteobacteria	Gammaproteobacteria	4.86126	60.2	chromosome:NZ_AP014655.1/AP014655.1	-	1	4513	4334	10/25/14	4/17/17	Chromosome	Nihon University	SAMD00017418	GCA_000828755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/755/GCA_000828755.1_ASM82875v1	25523772	MT-1
Streptomyces sp. TLI_053	1855352	PRJEB16370	349326	Terrabacteria group	Actinobacteria	9.90005	73.6	chromosome I:NZ_LT629775.1/LT629775.1	-	1	8233	7840	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216371	GCA_900105395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/395/GCA_900105395.1_IMG-taxon_2671180173_annotated_assembly	-	TLI_053
Paeniclostridium sordellii	1505	PRJEB8144	277668	Terrabacteria group	Firmicutes	3.45134	27.4	-	CDNV01	26	3381	3280	3/13/15	4/4/17	Contig	WTSI	SAMEA1572101	GCA_001372755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/755/GCA_001372755.1_SSCC33589	-	SSCC33589
Acinetobacter sp. CIP 53.82	1144671	PRJNA183243	183243	Proteobacteria	Gammaproteobacteria	3.15034	45.9	-	APRK01	11	3026	2856	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01828136	GCA_000369465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/465/GCA_000369465.1_Acin_sp_CIP_53_82_V1	-	CIP 53.82
Klebsiella sp. NFIX40	1566157	PRJEB16029	348500	Proteobacteria	Gammaproteobacteria	5.28329	58.1	-	FMUM01	19	5213	4966	10/17/16	7/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159387	GCA_900101155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/155/GCA_900101155.1_IMG-taxon_2602042110_annotated_assembly	-	NFIX40
Flavobacterium sp. LM4	1938609	PRJNA363097	363097	FCB group	Bacteroidetes/Chlorobi group	5.72764	33.7	-	MUFW01	17	4937	4663	3/3/17	3/6/17	Contig	The University of Chicago	SAMN06263772	GCA_002017935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/935/GCA_002017935.1_ASM201793v1	-	LM4
Frankia sp. CcI6	1352929	PRJNA217436	217436	Terrabacteria group	Actinobacteria	5.57578	69.3	-	AYTZ01	136	4780	4342	12/3/13	4/11/17	Scaffold	University of New Hampshire	SAMN02216979	GCA_000503735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/735/GCA_000503735.2_CcI6	24435877	CcI6
Bacillus sp. 7_6_55CFAA_CT2	665957	PRJNA40005	40005	Terrabacteria group	Firmicutes	5.74729	35	-	ACWE01	30	6025	5511	12/16/11	5/18/17	Scaffold	Broad Institute	SAMN02463788	GCA_000238655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/655/GCA_000238655.1_Bacillus_sp_7_6_55CFAA_CT2_V1	-	7_6_55CFAA_CT2
Clostridium sp. HMSC19C08	1581186	PRJNA269815	269815	Terrabacteria group	Firmicutes	4.06923	28.5	-	LWPC01	79	3738	3643	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436145	GCA_001806655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/655/GCA_001806655.1_ASM180665v1	-	HMSC19C08
Sphingomonas sp. Leaf30	1736213	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.40308	65.8	-	LMKZ01	22	3953	3808	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151593	GCA_001422525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/525/GCA_001422525.1_ASM142252v1	26633631	Leaf30
Synechococcus sp. PCC 7336	195250	PRJNA158719	158719	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.06664	53.7	chromosome:NZ_CM001776.1/CM001776.1	ALWC01	1	4625	4347	1/18/13	4/17/17	Chromosome	JGI	SAMN02261338	GCA_000332275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/275/GCA_000332275.1_ASM33227v1	23277585	PCC 7336
Rhodococcus sp. P27	1384060	PRJNA214615	214615	Terrabacteria group	Actinobacteria	6.26235	62.4	-	AVCO01	60	5973	5005	8/23/13	4/8/17	Contig	Embrapa Environment	SAMN02313937	GCA_000454285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/285/GCA_000454285.1_RhodP27	24072865	P27
Enterobacter sp. MGH 15	1329824	PRJNA201930	201930	Proteobacteria	Gammaproteobacteria	5.28451	55	-	JCLK01	4	5227	4935	2/3/14	4/9/17	Scaffold	Broad Institute	SAMN02138555	GCA_000534555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/555/GCA_000534555.1_Ente_cloa_complex_MGH_15_V1	-	MGH 15
Staphylococcus sp. HMSC055A09	1715121	PRJNA296249	296249	Terrabacteria group	Firmicutes	2.39095	32.8	-	LTJH01	25	2274	2201	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477525	GCA_001809655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/655/GCA_001809655.1_ASM180965v1	-	HMSC055A09
Corynebacterium sp. HMSC11D10	1581088	PRJNA269857	269857	Terrabacteria group	Actinobacteria	2.44311	61.6	-	LTZO01	75	2327	2200	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03287011	GCA_001806995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/995/GCA_001806995.1_ASM180699v1	-	HMSC11D10
Arthrobacter sp. H41	1312978	PRJNA232076	232076	Terrabacteria group	Actinobacteria	3.2507	65.8	-	AZRZ01	148	3269	2751	1/14/14	4/9/17	Scaffold	University of Auckland	SAMN02429166	GCA_000520535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/535/GCA_000520535.1_Ah41DRAFT	25649291	H41
Bradyrhizobium sp. Leaf396	1736363	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	7.70928	63.8	-	LMQJ01	66	7324	7020	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151753	GCA_001424605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/605/GCA_001424605.1_Leaf396	26633631	Leaf396
Streptococcus sp. HMSC069D09	1715050	PRJNA296177	296177	Terrabacteria group	Firmicutes	2.09173	35.3	-	LTLJ01	58	2169	2090	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04495794	GCA_001808575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/575/GCA_001808575.1_ASM180857v1	-	HMSC069D09
Mycobacterium sp. Root265	1736504	PRJNA297942	297942	Terrabacteria group	Actinobacteria	6.6721	67.2	-	LMJA01	33	6434	6275	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155773	GCA_001428895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/895/GCA_001428895.1_Root265	26633631	Root265
Serratia sp. 14-2641	1841657	PRJNA319063	319063	Proteobacteria	Gammaproteobacteria	6.34351	53.5	-	LXKR01	105	5974	5740	7/22/16	4/13/17	Scaffold	Oregon State University	SAMN04901303	GCA_001692375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/375/GCA_001692375.1_ASM169237v1	27547538	14-2641
Pantoea sp. OXWO6B1	1835724	PRJNA312098	312098	Proteobacteria	Gammaproteobacteria	5.23614	52.7228	plasmid unnamed1:NZ_CM004290.1/CM004290.1; plasmid unnamed2:NZ_CM004291.1/CM004291.1; plasmid unnamed3:NZ_CM004292.1/CM004292.1	LWLR01	5	4979	4715	5/10/16	4/12/17	Scaffold	Agriculture and Agri-Food Canada	SAMN04857056	GCA_001641135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/135/GCA_001641135.1_ASM164113v1	-	OXWO6B1
Prevotella sp. S7 MS 2	1287488	PRJNA219649	219649	FCB group	Bacteroidetes/Chlorobi group	2.79787	43.9	-	JRPT01	131	2360	2245	10/2/14	4/17/17	Contig	J. Craig Venter Institute	SAMN02850950	GCA_000762865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/865/GCA_000762865.1_04_NF40_HMP671v01	-	S7 MS 2
Enterococcus sp. HMSC060E05	1739477	PRJNA300127	300127	Terrabacteria group	Firmicutes	2.87238	37.7	-	LTUS01	255	2933	2791	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480399	GCA_001814465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/465/GCA_001814465.1_ASM181446v1	-	HMSC060E05
Lactobacillus sp. N15.MGS-260	1637506	PRJNA277012	277012	Terrabacteria group	Firmicutes	1.82086	47.5	-	LARJ01	151	-	-	4/24/15	6/10/15	Contig	The Mayo Clinic	SAMN03450002	GCA_000980425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/425/GCA_000980425.1_ASM98042v1	26021920	-
Novosphingobium sp. 17-62-9	1970408	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	3.39398	62.4	-	NCIG01	240	3262	3140	8/16/17	8/16/17	Scaffold	None	SAMN06622248	GCA_002256795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/795/GCA_002256795.1_ASM225679v1	-	-
Treponema sp. UBA1226	1947698	PRJNA348753	348753	Spirochaetes	Spirochaetia	1.44138	38	-	DBWY01	14	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06455339	GCA_002309195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/195/GCA_002309195.1_ASM230919v1	28894102	-
Citrobacter sp. CFSAN044567	1897730	PRJNA342326	342326	Proteobacteria	Gammaproteobacteria	5.5804	51.8	-	MIEG01	149	5689	5312	9/7/16	4/13/17	Contig	FDA	SAMN05213497	GCA_001721255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/255/GCA_001721255.1_ASM172125v1	-	CFSAN044567
Methylobacterium sp. Leaf121	1736262	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	5.52849	68.3	-	LMNP01	32	5143	4889	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151642	GCA_001423385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/385/GCA_001423385.1_Leaf121	26633631	Leaf121
Nocardioides sp. PD653-B2	1892811	PRJDB5132	382671	Terrabacteria group	Actinobacteria	4.9841	71	-	BDJE01	81	4822	4636	4/11/17	7/24/17	Contig	"Microbiology, Applied Biology and Chemistry, Tokyo university of Agriclture"	SAMD00066186	GCA_002117935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/935/GCA_002117935.1_ASM211793v1	-	PD653-B2
Erythrobacter sp. REDSEA-S22_B4	1811531	PRJNA289734	289734	Proteobacteria	Alphaproteobacteria	2.68796	63.7	-	LUNP01	10	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534565	GCA_001626465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/465/GCA_001626465.1_ASM162646v1	27377622	-
Marinobacter sp. Hex_13	1795866	PRJNA301966	301966	Proteobacteria	Gammaproteobacteria	4.46671	57	-	LSMM01	95	4114	3978	2/23/16	2/23/16	Contig	The University of Texas at Austin	SAMN04458015	GCA_001566815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/815/GCA_001566815.1_ASM156681v1	-	-
Acidovorax sp. Leaf160	1736280	PRJNA297956	297956	Proteobacteria	Betaproteobacteria	4.7179	68.6	-	LMOV01	29	4167	4032	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151660	GCA_001424265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/265/GCA_001424265.1_Leaf160	26633631	Leaf160
Janthinobacterium sp. YR213	1881027	PRJEB15922	348263	Proteobacteria	Betaproteobacteria	6.42154	62.7	-	FNDA01	15	5701	5566	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05428968	GCA_900099875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/875/GCA_900099875.1_IMG-taxon_2690315660_annotated_assembly	-	YR213
Eubacterium sp. CAG:841	1262894	PRJEB1021	206886	Terrabacteria group	Firmicutes	1.78145	45.3	-	CBIL01	46	1689	1650	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138753	GCA_000437375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/375/GCA_000437375.1_MGS841	-	-
Alcanivorax sp. UBA1092	1945967	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.1227	66.4	-	DCCB01	55	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06457030	GCA_002313655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/655/GCA_002313655.1_ASM231365v1	28894102	-
Stenotrophomonas sp. UBA2123	1947549	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.6241	69.5	-	DCXZ01	57	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450348	GCA_002331685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/685/GCA_002331685.1_ASM233168v1	28894102	-
Paenibacillus sp. Root444D2	1736538	PRJNA297942	297942	Terrabacteria group	Firmicutes	8.11917	44.7	-	LMEO01	53	7271	7031	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155807	GCA_001426375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/375/GCA_001426375.1_Root444D2	26633631	Root444D2
Ruminococcus sp. CAG:177	1262952	PRJEB741	206590	Terrabacteria group	Firmicutes	2.11456	51.6	-	CBDQ01	58	1976	1937	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138696	GCA_000436215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/215/GCA_000436215.1_MGS177	-	-
Thioalkalivibrio sp. ARh4	1158151	PRJNA181381	181381	Proteobacteria	Gammaproteobacteria	3.04351	65.6	-	ARJY01	10	2930	2816	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441345	GCA_000378265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/265/GCA_000378265.1_ASM37826v1	-	ARh4
Bacteroides sp. HMSC073E02	1739517	PRJNA300168	300168	FCB group	Bacteroidetes/Chlorobi group	6.62293	42.1	-	LTTH01	116	5337	5071	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480435	GCA_001815255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/255/GCA_001815255.1_ASM181525v1	-	HMSC073E02
Shigella sp. FC2117	1898682	PRJNA342379	342379	Proteobacteria	Gammaproteobacteria	4.51964	50.8	-	MINP01	492	4833	4116	9/17/16	9/17/16	Contig	Christian Medical College	SAMN05756121	GCA_001730485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/485/GCA_001730485.1_ASM173048v1	-	FC2117
Exiguobacterium sp. UBA3491	1946491	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.90881	46.9	-	DFQK01	32	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457113	GCA_002377745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/745/GCA_002377745.1_ASM237774v1	28894102	-
Prochlorococcus sp. HOT212_60m_824C06	1961096	PRJNA375761	375761	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.02154	31.2	-	MWPF01	268	1145	1004	3/14/17	3/16/17	Scaffold	Massachusetts Institute of Technology	SAMN06345456	GCA_002026105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/105/GCA_002026105.1_ASM202610v1	-	HOT212_60m_824C06
Actinomyces sp. HMSC065F12	1739479	PRJNA300129	300129	Terrabacteria group	Actinobacteria	2.62812	58.8	-	LTUQ01	115	2347	2216	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480398	GCA_001814535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/535/GCA_001814535.1_ASM181453v1	-	HMSC065F12
Propionibacterium sp. KPL2000	1203629	PRJNA170369	170369	Terrabacteria group	Actinobacteria	2.56219	63.4	-	AXMH01	3	2387	2232	10/21/13	4/17/17	Contig	Broad Institute	SAMN02597014	GCA_000477795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/795/GCA_000477795.1_Prop_sp_KPL2000_V1	-	KPL2000
Alistipes sp. UBA936	1946016	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.3494	55.8	-	DBDI01	31	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451391	GCA_002293505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/505/GCA_002293505.1_ASM229350v1	28894102	-
Campylobacter sp. 4	2039346	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.65271	30.3	-	NXBH01	141	1765	1652	9/27/17	9/27/17	Contig	University of California at Davis	SAMN06277493	GCA_002384005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/005/GCA_002384005.1_ASM238400v1	-	4
Neisseria sp. HMSC071A01	1739332	PRJNA299982	299982	Proteobacteria	Betaproteobacteria	2.27113	49.1	-	LTFD01	52	2239	2118	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477641	GCA_001811945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/945/GCA_001811945.1_ASM181194v1	-	HMSC071A01
Pseudonocardia sp. 73-21	1895809	PRJNA279279	279279	Terrabacteria group	Actinobacteria	7.09056	72.6	-	MKVV01	111	6911	6632	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660616	GCA_001899645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/645/GCA_001899645.1_ASM189964v1	-	-
Rothia sp. HMSC036D11	1739462	PRJNA300112	300112	Terrabacteria group	Actinobacteria	2.49118	53.7	-	LTVG01	46	2139	2042	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480381	GCA_001814205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/205/GCA_001814205.1_ASM181420v1	-	HMSC036D11
Rhodanobacter sp. SCN 69-32	1660136	PRJNA279279	279279	Proteobacteria	Gammaproteobacteria	3.54136	68.6	-	MEGJ01	37	3063	2951	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652513	GCA_001725465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/465/GCA_001725465.1_ASM172546v1	26031303	-
Sphingobium sp. Z007	627495	PRJEB12244	390091	Proteobacteria	Alphaproteobacteria	4.87231	63.4	-	FBVT01	101	4715	4510	6/11/17	6/21/17	Scaffold	UNIVERSITY OF ZUERICH	SAMEA3718967	GCA_900010525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/525/GCA_900010525.1_Sphingobium_sp_Z007_rep_B_without_predator	-	-
Halomonas sp. CSM-2	1975722	PRJNA381545	381545	Proteobacteria	Gammaproteobacteria	4.13142	56.9	-	NBYR01	55	3856	3647	5/8/17	5/10/17	Contig	Queen's University Belfast	SAMN06680021	GCA_002119345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/345/GCA_002119345.1_ASM211934v1	-	CSM-2
Rhizobium sp. CF394	1500304	PRJNA247554	247554	Proteobacteria	Alphaproteobacteria	6.62667	59.1	-	JQKY01	51	6391	6129	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02787060	GCA_000746265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/265/GCA_000746265.1_ASM74626v1	-	CF394
Chryseobacterium sp. YR005	1500288	PRJNA247530	247530	FCB group	Bacteroidetes/Chlorobi group	3.7897	35.2	-	JUGK01	19	3533	3442	12/9/14	4/10/17	Contig	DOE Joint Genome Institute	SAMN02787112	GCA_000799255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/255/GCA_000799255.1_ASM79925v1	-	YR005
Mesorhizobium sp. L48C026A00	1287182	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	7.78691	62.1	-	AYWU01	138	7596	6746	12/3/13	4/20/17	Contig	University of Southern California	SAMN02359660	GCA_000502375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/375/GCA_000502375.1_Mloti_L48C026A00	-	L48C026A00
Variovorax sp. NFACC26	1566275	PRJEB17145	351385	Proteobacteria	Betaproteobacteria	8.20996	67.4	-	FOKS01	56	7684	7440	10/30/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159379	GCA_900112125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/125/GCA_900112125.1_IMG-taxon_2599185214_annotated_assembly	-	NFACC26
Xanthomonas translucens	343	PRJNA302486	302486	Proteobacteria	Gammaproteobacteria	4.78786	67.7	-	LNVM01	363	4149	3660	12/8/15	4/5/17	Scaffold	Kansas State University	SAMN04279083	GCA_001461975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/461/975/GCA_001461975.1_ASM146197v1	-	CS4
Snodgrassella alvi	1196083	PRJNA239651	239651	Proteobacteria	Betaproteobacteria	2.4385	43	-	JFZW01	34	2264	2060	5/22/14	4/2/17	Scaffold	Yale University	SAMN02677640	GCA_000695565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/565/GCA_000695565.1_SnoalvwkB12v1.0	25053814	wkB12
Microbacterium sp. B19	96765	PRJDA69963	69963	Terrabacteria group	Actinobacteria	3.65336	70.6	-	BADA01	576	3641	3071	12/26/12	4/17/17	Contig	Kazusa DNA Research Institute	SAMD00036571	GCA_000333395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/395/GCA_000333395.1_ASM33339v1	-	B19
Cupriavidus sp. UBA2010	1946396	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	6.35482	64	-	DDCI01	36	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451673	GCA_002335265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/265/GCA_002335265.1_ASM233526v1	28894102	-
uncultured Blautia sp.	765821	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.93228	43.7	-	FMFZ01	58	3556	3497	8/16/16	8/16/16	Scaffold	SC	SAMEA3545380	GCA_900066745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/745/GCA_900066745.1_14207_7_40	-	-
Raoultella ornithinolytica	54291	PRJNA385790	385790	Proteobacteria	Gammaproteobacteria	5.77461	55.3	-	NGAK01	63	5571	5324	8/23/17	8/25/17	Scaffold	Zhejiang University	SAMN06909731	GCA_002266685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/685/GCA_002266685.1_ASM226668v1	-	Ro24005
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.8349	58.9	-	LNWX01	77	4590	4455	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339861	GCA_001681685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/685/GCA_001681685.1_ASM168168v1	-	M43-2.3
Curtobacterium sp. MMLR14_014	1898744	PRJNA342146	342146	Terrabacteria group	Actinobacteria	3.82284	70.7	-	MJGX01	139	3572	3449	11/2/16	4/17/17	Scaffold	Massachusetts Institute of Technology	SAMN05736491	GCA_001865135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/135/GCA_001865135.1_ASM186513v1	-	MMLR14_014
Streptomyces rimosus subsp. rimosus	132474	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.51165	71.9	-	LGCT01	305	8435	7976	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900607	GCA_001279095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/095/GCA_001279095.1_ASM127909v1	-	NRRL WC-3899
Butyrivibrio sp. NC2007	1280683	PRJNA185725	185725	Terrabacteria group	Firmicutes	4.0004	43.6	-	ATWY01	54	3579	3468	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02440583	GCA_000421405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/405/GCA_000421405.1_ASM42140v1	-	NC2007
Ensifer sp. Root558	1736558	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	7.18431	62.3	-	LMGC01	39	6868	6567	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155827	GCA_001427045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/045/GCA_001427045.1_Root558	26633631	Root558
Sphingopyxis sp. H071	1759078	PRJNA294421	294421	Proteobacteria	Alphaproteobacteria	4.30922	64.8	-	LNSF01	30	4232	4116	12/15/15	4/11/17	Contig	US EPA	SAMN04256159	GCA_001468365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/365/GCA_001468365.1_ASM146836v1	-	H071
Mycoplasma haemofelis Ohio2	859194	PRJNA50029	50029	Terrabacteria group	Tenericutes	1.15594	38.8	chromosome:NC_017520.1/CP002808.1	-	1	1585	1495	5/27/11	8/19/15	Complete Genome	Purdue University	SAMN02603731	GCA_000186985.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/985/GCA_000186985.3_ASM18698v3	"2,131,732,821,936,940"	Ohio2
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.23279	34.5	-	LZHQ01	36	2130	1995	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179617	GCA_001690655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/655/GCA_001690655.1_ASM169065v1	-	Occ3-1
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.10191	42.2	-	FTQV01	1	981	914	3/18/17	3/24/17	Contig	Functional Genomics Genter Zurich	SAMEA4555931	GCA_900149625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/625/GCA_900149625.1_5-27b	-	-
Lysinibacillus sp. UBA3551	1946772	PRJNA348753	348753	Terrabacteria group	Firmicutes	4.72612	36.2	-	DFOC01	246	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06456093	GCA_002376495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/495/GCA_002376495.1_ASM237649v1	28894102	-
Salinivibrio sp. ES.052	1882823	PRJEB18290	355695	Proteobacteria	Gammaproteobacteria	3.57289	49.3	-	FSRI01	6	3322	3146	12/14/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444724	GCA_900141775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/775/GCA_900141775.1_IMG-taxon_2695421045_annotated_assembly	-	ES.052
Klebsiella michiganensis	1134687	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.20566	55.8	-	JWDM01	373	6062	5767	7/10/15	2/21/17	Contig	University of Washington	SAMN03197048	GCA_001053845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/845/GCA_001053845.1_ASM105384v1	26230489	1085_KOXY
Achromobacter sp. 2789STDY5608630	1806491	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	6.45357	67.8	-	CYTL01	29	5930	5779	9/19/15	4/11/17	Scaffold	SC	SAMEA2247595	GCA_001298935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/935/GCA_001298935.1_11861_6_23	-	2789STDY5608630
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	7.51317	44	-	MPVP01	1049	6921	6283	1/18/17	4/6/17	Contig	Cornell University	SAMN05772531	GCA_001955595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/595/GCA_001955595.1_ASM195559v1	-	FSL H7-0433
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.72692	50.8	-	MPQA01	67	2633	2539	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016244	GCA_002020225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/225/GCA_002020225.1_ASM202022v1	-	-
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.76482	32.3	-	FQKR01	13	2755	2578	11/24/16	4/5/17	Contig	SC	SAMEA3449091	GCA_900126685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/685/GCA_900126685.1_17175_3_35	-	3688STDY6125083
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.28501	57.9	-	NFWJ01	108	5302	4998	6/9/17	6/12/17	Contig	JCVI	SAMN05960967	GCA_002186965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/965/GCA_002186965.1_ASM218696v1	-	MM_2867
Lactobacillus taiwanensis	508451	PRJNA384810	384810	Terrabacteria group	Firmicutes	1.96154	34.2	-	NGOZ01	70	1949	1726	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848405	GCA_002253605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/605/GCA_002253605.1_ASM225360v1	-	103a
Enterobacter kobei	208224	PRJNA361484	361484	Proteobacteria	Gammaproteobacteria	5.27153	54.4	-	NIHL01	278	5329	4909	8/4/17	8/6/17	Contig	University of Sao Paulo	SAMN07195210	GCA_002241015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/015/GCA_002241015.1_ASM224101v1	-	ICBEaBL-III-03(2)
Proteiniphilum sp. UBA4913	1947261	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.89385	45.4	-	DHCB01	78	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450480	GCA_002398075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/075/GCA_002398075.1_ASM239807v1	28894102	-
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.63197	66.8	-	LPGX01	68	6105	5856	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449523	GCA_001531385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/385/GCA_001531385.1_ASM153138v1	-	MSMB1917WGS
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.52546	67.7	-	LPHB01	98	6844	6501	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449527	GCA_001531065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/065/GCA_001531065.1_ASM153106v1	-	MSMB1960WGS
Syntrophomonas sp. UBA4878	1947621	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.87956	44.1	-	DHDK01	153	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456583	GCA_002399315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/315/GCA_002399315.1_ASM239931v1	28894102	-
Oleiphilus sp. HI0069	1822245	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	5.90175	44.3	-	LWFK01	2238	5348	4573	5/2/16	5/2/16	Contig	Massachusetts Institute of Technology	SAMN04580784	GCA_001635795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/795/GCA_001635795.1_ASM163579v1	-	HI0069
Lachnoclostridium sp. UBA4112	1946692	PRJNA348753	348753	Terrabacteria group	Firmicutes	4.84747	38.6	-	DFXI01	199	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453442	GCA_002381775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/775/GCA_002381775.1_ASM238177v1	28894102	-
Fibrobacter sp. UWOS	1896214	PRJEB18355	355813	FCB group	Fibrobacteres	3.24212	48	-	FRAW01	93	2917	2760	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05720469	GCA_900142455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/455/GCA_900142455.1_IMG-taxon_2700988678_annotated_assembly	-	UWOS
Xanthomonas axonopodis pv. manihotis str. IBSBF 2673	1185682	PRJNA163759	163759	Proteobacteria	Gammaproteobacteria	4.83062	65.1	-	AKDN01	305	4387	3914	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090318	GCA_000266025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/025/GCA_000266025.1_IBSBF2673	22699502	IBSBF 2673
Catabacter sp. UBA1431	1946246	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.53283	60	-	DCTV01	78	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453844	GCA_002329665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/665/GCA_002329665.1_ASM232966v1	28894102	-
Candidatus Microthrix sp. UBA2110	1946164	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.4157	53.3	-	DCYM01	269	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455330	GCA_002331465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/465/GCA_002331465.1_ASM233146v1	28894102	-
Xanthomonas axonopodis pv. manihotis str. IBSBF 278	1185683	PRJNA163761	163761	Proteobacteria	Gammaproteobacteria	5.02021	64.9	-	AKDO01	138	4483	4150	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090319	GCA_000266045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/045/GCA_000266045.1_IBSBF278	22699502	IBSBF 278
Fibrobacter sp. UWH6	1896212	PRJEB18356	355814	FCB group	Fibrobacteres	3.92102	48.8	-	FRAX01	50	3286	3132	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05720765	GCA_900142465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/465/GCA_900142465.1_IMG-taxon_2700988679_annotated_assembly	-	UWH6
Oleiphilus sp. HI0071	1822246	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	5.69832	47.5	-	LWFL01	2289	5155	4361	5/2/16	5/2/16	Contig	Massachusetts Institute of Technology	SAMN04580785	GCA_001635805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/805/GCA_001635805.1_ASM163580v1	-	HI0071
Syntrophomonas sp. UBA4851	1947620	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.84474	45.7	-	DHEL01	187	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453588	GCA_002399845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/845/GCA_002399845.1_ASM239984v1	28894102	-
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.53046	67.7	-	LPHA01	95	6844	6507	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449526	GCA_001531405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/405/GCA_001531405.1_ASM153140v1	-	MSMB1956WGS
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.79899	66.7	-	LPKE01	77	6224	5945	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449610	GCA_001532155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/155/GCA_001532155.1_ASM153215v1	-	MSMB599WGS
Proteiniphilum sp. UBA4907	1947260	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.1715	40.9	-	DHCH01	150	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451819	GCA_002398155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/155/GCA_002398155.1_ASM239815v1	28894102	-
Enterobacter kobei	208224	PRJEB7657	277159	Proteobacteria	Gammaproteobacteria	5.59004	54.3	-	FKLS01	10	5598	5211	5/18/16	4/5/17	Contig	SC	SAMEA3181516	GCA_900078855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/855/GCA_900078855.1_15682_8_87	-	3380STDY6027363
Lactobacillus taiwanensis	508451	PRJNA384810	384810	Terrabacteria group	Firmicutes	1.96287	34.1	-	NGOY01	43	1944	1741	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848406	GCA_002253615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/615/GCA_002253615.1_ASM225361v1	-	103j
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.81299	57.2	-	NFWY01	146	6021	5654	6/9/17	6/12/17	Contig	JCVI	SAMN05960939	GCA_002187175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/175/GCA_002187175.1_ASM218717v1	-	G4612
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.76759	32.3	-	FQKP01	14	2755	2580	11/24/16	4/5/17	Contig	SC	SAMEA3449095	GCA_900126705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/705/GCA_900126705.1_17175_3_39	-	3688STDY6125087
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.55409	50.8	-	MPQC01	47	2481	2395	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016247	GCA_002020285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/285/GCA_002020285.1_ASM202028v1	-	-
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	6.78865	44.2	-	MPTR01	119	5942	5776	1/18/17	4/6/17	Contig	Cornell University	SAMN05772523	GCA_001955755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/755/GCA_001955755.1_ASM195575v1	-	FSL J3-0153
Achromobacter sp. ATCC31444	1806484	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	6.72074	63.9	-	CYTC01	32	6001	5825	9/19/15	4/11/17	Scaffold	SC	SAMEA2247603	GCA_001298955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/955/GCA_001298955.1_11861_6_29	-	ATCC 31444
Klebsiella michiganensis	1134687	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.87646	56	-	JWCT01	368	5673	5394	7/10/15	2/21/17	Contig	University of Washington	SAMN03197067	GCA_001053875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/875/GCA_001053875.1_ASM105387v1	26230489	1113_KOXY
Salinivibrio sp. IB872	1766123	PRJNA368809	368809	Proteobacteria	Gammaproteobacteria	3.64136	49.8	-	MUFO01	102	3402	3192	2/14/17	4/17/17	Scaffold	Universidad de Sevilla	SAMN06273036	GCA_001995345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/345/GCA_001995345.1_ASM199534v1	-	IB872
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.10372	42.2	-	FTQP01	3	991	923	3/18/17	3/24/17	Contig	Functional Genomics Genter Zurich	SAMEA4555942	GCA_900149645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/645/GCA_900149645.1_15-27b	-	-
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.68622	34.8	-	LZHR01	124	2586	2428	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179618	GCA_001690675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/675/GCA_001690675.1_ASM169067v1	-	Occ4-3
Acinetobacter pittii PHEA-2	871585	PRJNA51267	51267	Proteobacteria	Gammaproteobacteria	3.86253	38.8	chromosome:NC_016603.1/CP002177.1	-	1	3674	3599	3/3/11	8/30/17	Complete Genome	"Biotechnology Research Institute, Chinese Academy of Agricultural Sciences"	SAMN02603040	GCA_000191145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/145/GCA_000191145.1_ASM19114v1	21441526	PHEA-2
Sphingopyxis sp. H081	1759080	PRJNA294421	294421	Proteobacteria	Alphaproteobacteria	4.30623	64.8	-	LNSH01	51	4242	4105	12/15/15	4/11/17	Contig	US EPA	SAMN04256161	GCA_001468385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/385/GCA_001468385.1_ASM146838v1	-	H081
Ensifer sp. Root954	1736611	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	7.45705	62.2	-	LMJM01	54	7015	6750	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155880	GCA_001429005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/005/GCA_001429005.1_Root954	26633631	Root954
Butyrivibrio sp. FCS014	1408304	PRJNA223149	223149	Terrabacteria group	Firmicutes	4.08992	45.8	-	JAHA01	22	3604	3383	1/14/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02585011	GCA_000526935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/935/GCA_000526935.1_ASM52693v1	-	FCS014
Streptomyces rimosus subsp. rimosus	132474	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.58833	71.9	-	LGCS01	365	8480	7996	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900605	GCA_001279105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/105/GCA_001279105.1_ASM127910v1	-	NRRL WC-3873
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.72065	59	-	LNWY01	59	4487	4359	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339862	GCA_001681715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/715/GCA_001681715.1_ASM168171v1	-	NBRC101030
Raoultella ornithinolytica	54291	PRJNA385790	385790	Proteobacteria	Gammaproteobacteria	5.7735	55.3	-	NGAL01	58	5569	5328	8/23/17	8/25/17	Scaffold	Zhejiang University	SAMN06909730	GCA_002266695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/695/GCA_002266695.1_ASM226669v1	-	Ro23980
uncultured Blautia sp.	765821	PRJEB10915	297013	Terrabacteria group	Firmicutes	4.35973	42.6	-	FMGU01	67	3900	3837	8/16/16	8/16/16	Scaffold	SC	SAMEA3545421	GCA_900066965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/965/GCA_900066965.1_14207_7_81	-	-
Microbacterium sp. B24	95616	PRJDA69965	69965	Terrabacteria group	Actinobacteria	3.02787	69.5	-	BADB01	550	3082	2495	12/26/12	4/17/17	Contig	Kazusa DNA Research Institute	SAMD00036572	GCA_000333415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/415/GCA_000333415.1_ASM33341v1	-	B24
Hyphomonas sp. UBA3596	1946625	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.45211	58.4	-	DFMJ01	16	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453348	GCA_002375365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/365/GCA_002375365.1_ASM237536v1	28894102	-
Xanthomonas translucens	343	PRJNA302486	302486	Proteobacteria	Gammaproteobacteria	4.61424	68	-	LNVP01	117	3972	3639	12/8/15	4/4/17	Scaffold	Kansas State University	SAMN04279079	GCA_001461995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/461/995/GCA_001461995.1_ASM146199v1	-	LG54
Variovorax sp. NFACC27	1566274	PRJEB17304	351525	Proteobacteria	Betaproteobacteria	8.23358	67.4	-	FOOV01	81	7717	7465	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159447	GCA_900113295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/295/GCA_900113295.1_IMG-taxon_2599185226_annotated_assembly	-	NFACC27
Mesorhizobium sp. LNHC220B00	1287232	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.66346	62.5	-	AYWS01	49	6569	6002	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359662	GCA_000502395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/395/GCA_000502395.1_Mloti_LNHC220B00	-	LNHC220B00
Chryseobacterium sp. YR561	1500298	PRJNA247542	247542	FCB group	Bacteroidetes/Chlorobi group	4.42027	34.5	-	JUGT01	20	4016	3904	12/9/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02787077	GCA_000799455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/455/GCA_000799455.1_ASM79945v1	-	YR561
Rhizobium sp. OK494	1500306	PRJNA247560	247560	Proteobacteria	Alphaproteobacteria	7.41325	59.9	-	JQLA01	77	7085	6780	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02787153	GCA_000746325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/325/GCA_000746325.1_ASM74632v1	-	OK494
Halomonas sp. WN018	2032624	PRJNA400702	400702	Proteobacteria	Gammaproteobacteria	4.05412	52.5	-	NSKA01	34	3705	3566	9/6/17	9/8/17	Contig	"Institute of Agricultural c and Regional Planning, Chinese Academy of Agricultural Sciences"	SAMN07572982	GCA_002286955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/955/GCA_002286955.1_ASM228695v1	-	WN018
Sphingobium sp. Z007	627495	PRJEB12244	390091	Proteobacteria	Alphaproteobacteria	4.81421	63.4	-	FBVU01	98	4661	4448	6/11/17	6/21/17	Scaffold	UNIVERSITY OF ZUERICH	SAMEA3718966	GCA_900012545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/545/GCA_900012545.1_Sphingobium_sp_Z007_rep_A_without_predator	-	-
Rhodanobacter sp. SCN 68-63	1660134	PRJNA279279	279279	Proteobacteria	Gammaproteobacteria	3.43976	67.6	-	MEGL01	264	3281	2665	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652515	GCA_001725485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/485/GCA_001725485.1_ASM172548v1	26031303	-
Rothia sp. HMSC066G07	1739475	PRJNA300125	300125	Terrabacteria group	Actinobacteria	2.29899	59.5	-	LTUU01	23	1819	1730	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480395	GCA_001814485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/485/GCA_001814485.1_ASM181448v1	-	HMSC066G07
Neisseria sp. HMSC067H04	1739338	PRJNA299988	299988	Proteobacteria	Betaproteobacteria	2.30292	49.1	-	LTEX01	56	2285	2151	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477646	GCA_001812055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/055/GCA_001812055.1_ASM181205v1	-	HMSC067H04
Alistipes sp. UBA934	1946015	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.56152	51.7	-	DBDK01	10	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451389	GCA_002293535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/535/GCA_002293535.1_ASM229353v1	28894102	-
Propionibacterium sp. KPL1854	1203577	PRJNA169466	169466	Terrabacteria group	Actinobacteria	2.54926	60.1	-	AXMI01	8	2584	2441	10/21/13	4/17/17	Contig	Broad Institute	SAMN02597015	GCA_000477815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/815/GCA_000477815.1_Prop_sp_KPL1854_V1	-	KPL1854
Actinomyces sp. HMSC035G02	1739406	PRJNA300056	300056	Terrabacteria group	Actinobacteria	2.38143	65.6	-	LTNX01	61	2039	1949	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498682	GCA_001838165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/165/GCA_001838165.1_ASM183816v1	-	HMSC035G02
Prochlorococcus sp. HOT208_60m_813E23	1961089	PRJNA375759	375759	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.525465	31.5	-	MWOT01	201	571	471	3/14/17	3/16/17	Scaffold	Massachusetts Institute of Technology	SAMN06345449	GCA_002026175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/175/GCA_002026175.1_ASM202617v1	-	HOT208_60m_813E23
Exiguobacterium sp. UBA4141	1946493	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.35762	46.6	-	DFWF01	274	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451470	GCA_002380785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/785/GCA_002380785.1_ASM238078v1	28894102	-
Shigella sp. FC1967	1898041	PRJNA341907	341907	Proteobacteria	Gammaproteobacteria	4.23816	39.4	-	MIIZ01	1498	3813	2890	9/23/16	9/23/16	Contig	Christian Medical College	SAMN05730137	GCA_001743005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/743/005/GCA_001743005.1_ASM174300v1	-	FC1967
Bacteroides sp. Marseille-P3208T	1907658	PRJEB18049	354754	FCB group	Bacteroidetes/Chlorobi group	3.97462	45	-	FQSC01	14	3445	3258	11/25/16	4/16/17	Scaffold	URMITE	SAMEA4555867	GCA_900128495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/495/GCA_900128495.1_PRJEB18049	-	Marseille-P3208
Thioalkalivibrio sp. ALgr1	748655	PRJNA181382	181382	Proteobacteria	Gammaproteobacteria	2.74884	66	-	ARJZ01	9	2646	2544	4/22/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441330	GCA_000378285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/285/GCA_000378285.1_ASM37828v1	-	ALgr1
Ruminococcus sp. CAG:55	1262960	PRJEB927	206753	Terrabacteria group	Firmicutes	2.4467	41.1	-	CBEU01	149	2157	2125	6/11/13	1/30/15	Scaffold	DTU	SAMEA3138736	GCA_000437035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/035/GCA_000437035.1_MGS55	-	-
Paenibacillus sp. Root52	1736552	PRJNA297942	297942	Terrabacteria group	Firmicutes	6.62802	44.5	-	LMFO01	34	5985	5815	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155821	GCA_001426865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/865/GCA_001426865.1_Root52	26633631	Root52
Alcanivorax sp. UBA1614	1945971	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.84548	63.7	-	DCMU01	335	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454490	GCA_002321575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/575/GCA_002321575.1_ASM232157v1	28894102	-
Eubacterium sp. CAG:38	1262889	PRJEB858	206730	Terrabacteria group	Firmicutes	2.72995	41.9	-	CBIU01	67	2466	2436	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138771	GCA_000437735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/735/GCA_000437735.1_MGS38	-	-
Janthinobacterium sp. OK676	1855295	PRJEB16181	348937	Proteobacteria	Betaproteobacteria	6.27173	62.8	-	FNHA01	31	5602	5456	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216517	GCA_900103595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/595/GCA_900103595.1_IMG-taxon_2609459643_annotated_assembly	-	OK676
Acidovorax sp. Root70	1736590	PRJNA297942	297942	Proteobacteria	Betaproteobacteria	5.0068	64.9	-	LMHQ01	32	4649	4531	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04155859	GCA_001428225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/225/GCA_001428225.1_Root70	26633631	Root70
Marinobacter sp. T13-3	1794906	PRJNA308326	308326	Proteobacteria	Gammaproteobacteria	5.12951	57.5	-	LSRT01	1265	5759	5759	2/29/16	2/29/16	Contig	The Ohio State University	SAMN04432754	GCA_001577575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/575/GCA_001577575.1_ASM157757v1	-	-
Erythrobacter sp. REDSEA-S41_B1	1811537	PRJNA289734	289734	Proteobacteria	Alphaproteobacteria	2.93144	63.6	-	LUNV01	23	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534571	GCA_001626495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/495/GCA_001626495.1_ASM162649v1	27377622	-
Nocardioides sp. PD653	393303	PRJDB5132	382671	Terrabacteria group	Actinobacteria	5.07308	71	-	BDJG01	87	4927	4733	4/11/17	7/24/17	Contig	"Microbiology, Applied Biology and Chemistry, Tokyo university of Agriclture"	SAMD00066187	GCA_002117955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/955/GCA_002117955.1_ASM211795v1	-	PD653
Methylobacterium sp. Leaf123	1736264	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	5.43767	68.5	-	LMNS01	40	5016	4811	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151644	GCA_001423405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/405/GCA_001423405.1_Leaf123	26633631	Leaf123
Citrobacter sp. A316	1639132	PRJNA369027	369027	Proteobacteria	Gammaproteobacteria	5.35179	51.5	-	MVFZ01	51	5349	5063	3/20/17	3/22/17	Contig	"Faculty of Pharmacy, University of Porto"	SAMN06214716	GCA_002042945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/945/GCA_002042945.1_ASM204294v1	-	A316
Treponema sp. UBA1233	1947699	PRJNA348753	348753	Spirochaetes	Spirochaetia	3.11273	43.1	-	DBWR01	76	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06457548	GCA_002309305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/309/305/GCA_002309305.1_ASM230930v1	28894102	-
Novosphingobium sp. PASSN1	2015561	PRJNA340070	340070	Proteobacteria	Alphaproteobacteria	4.89765	64.2	-	NKIS01	40	4440	4327	8/16/17	8/16/17	Scaffold	CNRS-AMU	SAMN07280675	GCA_002278815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/815/GCA_002278815.1_ASM227881v1	-	-
Lactobacillus sp. N54.MGS-719	1637512	PRJNA277012	277012	Terrabacteria group	Firmicutes	1.82179	38.4	-	LARO01	151	-	-	4/24/15	6/10/15	Contig	The Mayo Clinic	SAMN03450008	GCA_000980505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/505/GCA_000980505.1_ASM98050v1	26021920	-
Enterococcus sp. HMSC061C05	1739492	PRJNA300142	300142	Terrabacteria group	Firmicutes	2.72709	38.3	-	LTUE01	50	2671	2555	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480409	GCA_001814765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/765/GCA_001814765.1_ASM181476v1	-	HMSC061C05
Prevotella sp. P4-65	1602168	PRJNA272653	272653	FCB group	Bacteroidetes/Chlorobi group	3.13606	47.8	-	JXQH01	96	2465	2320	2/9/15	4/10/17	Contig	University of Ljubljana	SAMN03284260	GCA_000833955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/955/GCA_000833955.1_ASM83395v1	-	P4-65
Pantoea sp. Ae16	1890373	PRJNA338688	338688	Proteobacteria	Gammaproteobacteria	3.99662	56.4	-	MDJQ01	41	3690	3554	11/17/16	4/14/17	Scaffold	New Mexico State University	SAMN05560685	GCA_001881025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/025/GCA_001881025.1_ASM188102v1	-	Ae16
Serratia sp. GLFA	1326759	PRJNA196463	196463	Proteobacteria	Gammaproteobacteria	5.49614	53.7	-	ARZD01	4657	-	-	5/14/13	11/6/13	Contig	Altogen Labs	SAMN02393805	GCA_000392415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/415/GCA_000392415.2_Cofactor	-	GLFA
Mycobacterium sp. M26	1762962	PRJEB11994	305112	Terrabacteria group	Actinobacteria	5.73201	67.5	-	FAXD01	9	5491	5298	12/4/15	4/11/17	Scaffold	URMITE	SAMEA3696413	GCA_001494595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/595/GCA_001494595.1_Mycobacterium_massilipolynesiensis	-	M26
Streptococcus sp. HMSC076E03	1715077	PRJNA296205	296205	Terrabacteria group	Firmicutes	2.11212	35.3	-	LTLI01	64	2166	2030	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04461800	GCA_001808585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/585/GCA_001808585.1_ASM180858v1	-	HMSC076E03
Bradyrhizobium sp. ORS 285	115808	PRJNA65549	65549	Proteobacteria	Alphaproteobacteria	7.60225	65.2	-	CAFH01	301	6843	6583	12/14/11	5/18/17	Contig	IRD LSTM	SAMEA3138405	GCA_000239755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/755/GCA_000239755.2_ASM23975v2	24704842	ORS285
Arthrobacter sp. Br18	1312954	PRJNA232074	232074	Terrabacteria group	Actinobacteria	3.54413	65.8	-	AZSA01	120	3478	3064	1/14/14	4/9/17	Scaffold	University of Auckland	SAMN02429165	GCA_000520555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/555/GCA_000520555.1_Abr18DRAFT	25649291	Br18
Corynebacterium sp. HMSC11E11	1581089	PRJNA269858	269858	Terrabacteria group	Actinobacteria	2.7532	69	-	LTZP01	88	2407	2296	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03287012	GCA_001807025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/025/GCA_001807025.1_ASM180702v1	-	HMSC11E11
Staphylococcus sp. HMSC074B09	1715141	PRJNA296269	296269	Terrabacteria group	Firmicutes	2.21685	31.3	-	LTJD01	80	2200	2091	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477522	GCA_001809735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/735/GCA_001809735.1_ASM180973v1	-	HMSC074B09
Enterobacter sp. MGH 12	1329821	PRJNA201927	201927	Proteobacteria	Gammaproteobacteria	4.98405	54.9	-	JCLM01	11	4880	4602	2/3/14	4/2/17	Scaffold	Broad Institute	SAMN02138552	GCA_000534595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/595/GCA_000534595.1_Ente_cloa_complex_MGH_12_V1	-	MGH 12
Rhodococcus sp. UNC23MFCrub1.1	1449068	PRJNA234953	234953	Terrabacteria group	Actinobacteria	4.69662	68.5	-	JMLQ01	24	4394	4258	5/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743366	GCA_000686025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/025/GCA_000686025.1_ASM68602v1	-	UNC23MFCrub1.1
Synechococcus sp. WH 5701	69042	PRJNA13554	13554	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.28024	64.3	-	AANO01	116	3230	3009	2/15/06	4/17/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436085	GCA_000153045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/045/GCA_000153045.1_ASM15304v1	-	WH 5701
Sphingomonas sp. Leaf412	1736370	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	3.46269	69.4	-	LMQP01	5	3272	3105	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151760	GCA_001425405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/405/GCA_001425405.1_Leaf412	26633631	Leaf412
Clostridium sp. HMSC19C09	1581187	PRJNA269816	269816	Terrabacteria group	Firmicutes	4.06041	28.4	-	LWPB01	91	3734	3620	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436191	GCA_001806705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/705/GCA_001806705.1_ASM180670v1	-	HMSC19C09
Bacillus sp. 37MA	1132442	PRJNA165517	165517	Terrabacteria group	Firmicutes	3.98158	40.5	-	ARCN01	5	4132	3883	4/19/13	4/10/17	Scaffold	DOE Joint Genome Institute	SAMN02256468	GCA_000372765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/765/GCA_000372765.1_ASM37276v1	-	37MA
Frankia sp. BMG5.23	683305	PRJNA217862	217862	Terrabacteria group	Actinobacteria	5.26596	69.9	-	JDWE01	166	4608	4182	5/8/14	4/16/17	Scaffold	University of New Hampshire	SAMN02338736	GCA_000685765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/765/GCA_000685765.2_BMG5.23v1	24874687	BMG5.23
Flavobacterium sp. LM5	1938610	PRJNA363098	363098	FCB group	Bacteroidetes/Chlorobi group	3.98031	35.5	-	MUFX01	63	3474	3200	3/3/17	3/6/17	Contig	The University of Chicago	SAMN06263773	GCA_002017945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/945/GCA_002017945.1_ASM201794v1	-	LM5
Klebsiella sp. NFIX29	1566165	PRJEB15742	347675	Proteobacteria	Gammaproteobacteria	5.28471	58.1	-	FMUU01	20	5224	4969	10/17/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159393	GCA_900101255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/255/GCA_900101255.1_IMG-taxon_2602042103_annotated_assembly	-	NFIX29
Acinetobacter sp. ANC 4105	1217703	PRJNA183242	183242	Proteobacteria	Gammaproteobacteria	4.10693	40.5	-	APRL01	5	3906	3741	4/17/13	5/18/17	Scaffold	Broad Institute	SAMN01087867	GCA_000369485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/485/GCA_000369485.1_Acin_sp_ANC_4105_V1	-	ANC 4105
Paeniclostridium sordellii	1505	PRJEB8145	277669	Terrabacteria group	Firmicutes	3.50133	27.3	-	CDNH01	29	3417	3321	3/13/15	4/4/17	Contig	WTSI	SAMEA1572080	GCA_001372775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/775/GCA_001372775.1_SSCC42239	-	SSCC42239
Streptomyces sp. 3124.6	1882757	PRJEB18237	355540	Terrabacteria group	Actinobacteria	9.37555	70.7	chromosome I:NZ_LT670819.1/LT670819.1	-	1	8474	7944	12/2/16	3/18/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05444521	GCA_900129855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/855/GCA_900129855.1_IMG-taxon_2695421014_annotated_assembly	-	3124.6
Pseudomonas sp. DRA525	1916993	PRJNA352034	352034	Proteobacteria	Gammaproteobacteria	6.26758	62.8	chromosome:NZ_CP018743.1/CP018743.1	-	1	5777	5547	12/19/16	4/17/17	Chromosome	Birmingham-Southern College	SAMN05829281	GCA_001908395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/395/GCA_001908395.1_ASM190839v1	-	DRA525
Pseudomonas chlororaphis subsp. aurantiaca PB-St2	1415170	PRJNA225665	225665	Proteobacteria	Gammaproteobacteria	6.59092	63.2	-	AYUD01	23	5962	5735	12/11/13	4/2/17	Scaffold	University of Tuebingen	SAMN02388884	GCA_000506385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/385/GCA_000506385.1_PcsubspaPBSt2-2.0	24459254	PB-St2
Vibrio cyclitrophicus	47951	PRJNA318805	318805	Proteobacteria	Gammaproteobacteria	4.9818	43.5	-	MAKB01	88	4356	4237	7/21/16	4/5/17	Scaffold	Massachusetts Institute of Technology	SAMN04867934	GCA_001691175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/175/GCA_001691175.1_ASM169117v1	-	5F59
Elizabethkingia anophelis	1117645	PRJNA248328	248328	FCB group	Bacteroidetes/Chlorobi group	3.93625	35.5	-	JNCG01	50	3572	3484	7/28/14	4/2/17	Contig	University of Malaya	SAMN02797821	GCA_000735205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/205/GCA_000735205.1_ASM73520v1	-	B2D
Salinispora pacifica CNT084	1136419	PRJNA169840	169840	Terrabacteria group	Actinobacteria	5.47127	69.5	-	AZWA01	138	5192	4703	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597231	GCA_000514495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/495/GCA_000514495.1_ASM51449v1	-	CNT084
Leptospira kirschneri serovar Mozdok str. Brem 166	1049962	PRJNA74211	74211	Spirochaetes	Spirochaetia	4.35363	35.9	-	AHQI01	475	3939	3611	2/3/12	5/18/17	Scaffold	J. Craig Venter Institute	SAMN00739376	GCA_000246335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/335/GCA_000246335.2_CLC_glsol059	-	Brem 166
Rhodococcus fascians	1828	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.93354	64.4	-	NPFT01	44	5621	5459	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07414575	GCA_002259295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/295/GCA_002259295.1_ASM225929v1	-	14-2632-D2
Campylobacter lanienae	75658	PRJNA341004	341004	Proteobacteria	delta/epsilon subdivisions	1.58685	34.7	-	MJJR01	19	1651	1576	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687024	GCA_002139385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/385/GCA_002139385.1_ASM213938v1	28854596	P158
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28374	32.4	chromosome:AP017588.1	-	1	-	-	1/24/17	1/27/17	Chromosome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053863	GCA_002356975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/975/GCA_002356975.1_ASM235697v1	-	HH-18
Vibrio campbellii	680	PRJNA257165	257165	Proteobacteria	Gammaproteobacteria	5.09258	45.7	-	JPTC01	3988	-	-	7/22/15	7/22/15	Contig	Naval Research Laboratory	SAMN02948011	GCA_001185285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/285/GCA_001185285.1_ASM118528v1	-	42A
Mycobacterium chelonae	1774	PRJNA347845	347845	Terrabacteria group	Actinobacteria	5.03505	63.9	-	MLCH01	20	4933	4806	1/11/17	4/6/17	Contig	University of Georgia	SAMN05897972	GCA_001942545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/545/GCA_001942545.1_ASM194254v1	-	ATCC 35752
Helicobacter pylori 51	290847	PRJNA9627	9627	Proteobacteria	delta/epsilon subdivisions	1.58995	38.8	chromosome:NC_017382.1/CP000012.1	-	1	1575	1417	10/21/09	3/22/17	Complete Genome	Gyeongsang National University College of Medicine and 21c Frontier Human Functional Genome Research Project	SAMN02603300	GCA_000011725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/725/GCA_000011725.1_ASM1172v1	-	51
Morganella morganii	582	PRJNA311932	311932	Proteobacteria	Gammaproteobacteria	3.80598	51.1	-	LSUX01	79	3694	3540	5/31/16	4/5/17	Scaffold	National Institute of Health Dr Ricardo Jorge	SAMN04497995	GCA_001653675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/675/GCA_001653675.1_ASM165367v1	-	INSali207
Streptococcus sobrinus TCI-357	1074077	PRJNA71921	71921	Terrabacteria group	Firmicutes	2.09481	43.5	-	AGGZ01	220	2094	1880	10/6/11	3/30/17	Contig	JCVI	SAMN02436456	GCA_000228265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/265/GCA_000228265.2_SMUT2-NEX_6-357	-	TCI-357
Enterococcus hirae	1354	PRJNA395161	395161	Terrabacteria group	Firmicutes	3.09187	36.5	-	NNSV01	23	2877	2691	8/22/17	8/24/17	Contig	CSIR-National Environmental Engineering Research Institute (CSIR-NEERI)	SAMN07372521	GCA_002265245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/245/GCA_002265245.1_ASM226524v1	-	AAK_VMS5
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.73574	66.5	-	LOUE01	122	8108	7667	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449166	GCA_001522625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/625/GCA_001522625.1_ASM152262v1	-	INT3-BP107
Mycobacterium africanum MAL020173	1354191	PRJNA211700	211700	Terrabacteria group	Actinobacteria	4.38398	65.6	-	JKYR01	2	4237	4021	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02231167	GCA_000667325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/325/GCA_000667325.1_Myco_afri_MAL020173_V1	-	MAL020173
Gallibacterium anatis	750	PRJNA393346	393346	Proteobacteria	Gammaproteobacteria	2.32477	40.2	-	NLFM01	55	2266	2088	8/22/17	8/24/17	Contig	BUAP-UANM	SAMN07328925	GCA_002263295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/295/GCA_002263295.1_ASM226329v1	-	2PKA3
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98822	64.1	-	FVEG01	23	4947	4802	3/10/17	3/18/17	Contig	SC	SAMEA2070661	GCA_900132055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/055/GCA_900132055.1_10665_4_50	-	305
Aeromonas veronii	654	PRJNA345309	345309	Proteobacteria	Gammaproteobacteria	4.42225	58.9	-	MRZQ01	74	4069	3807	12/19/16	4/6/17	Contig	Masaryk University	SAMN05860749	GCA_001908555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/555/GCA_001908555.1_ASM190855v1	-	CCM 7244
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.66186	54.2	-	JUHZ01	202	5678	5377	12/16/14	4/6/17	Contig	JCVI	SAMN03012837	GCA_000802765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/765/GCA_000802765.1_SPADES_assembly_of_Enterobacter_cloacae_ND17	-	ND17
Xanthomonas perforans	442694	PRJNA276642	276642	Proteobacteria	Gammaproteobacteria	5.13996	64.9	-	JZVQ01	119	4717	4330	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03379526	GCA_001009865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/865/GCA_001009865.1_ASM100986v1	26089818	GEV917
Streptococcus pseudopneumoniae	257758	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.12301	39.9	-	JVMU01	86	2144	1980	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197482	GCA_001072115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/115/GCA_001072115.1_ASM107211v1	26230489	289_SPSE
Kingella kingae KK56	1305771	PRJEB1623	194475	Proteobacteria	Betaproteobacteria	1.993	46.6	-	CBSE01	1	1918	1639	9/11/13	4/2/17	Scaffold	URMITE	SAMEA2271982	GCA_000470395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/395/GCA_000470395.1_G116	-	KK56
Vibrio anguillarum	55601	PRJNA267178	267178	Proteobacteria	Gammaproteobacteria	4.14273	44.5952	chromosome I:CP010038.1; chromosome II:CP010039.1; plasmid pJM1:CP016262.1	-	3	3610	3473	2/7/17	2/7/17	Chromosome	University of Copenhagen	SAMN03178184	GCA_001989915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/915/GCA_001989915.1_ASM198991v1	-	9014/8
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.92741	55.1	-	JUHX01	81	4859	4616	12/16/14	3/25/17	Contig	JCVI	SAMN03012827	GCA_000802715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/715/GCA_000802715.1_SPADES_assembly_of_Enterobacter_cloacae_ND14	-	ND14
Streptococcus parasanguinis	1318	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.27466	41.6	-	JVCY01	80	2230	2132	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197738	GCA_001076955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/955/GCA_001076955.1_ASM107695v1	26230489	540.rep2_SPAR
Fusobacterium necrophorum subsp. funduliforme	143387	PRJNA315619	315619	Fusobacteria	Fusobacteriia	2.11048	35.2	-	LVFB01	72	2027	1940	3/25/16	4/5/17	Contig	Aarhus University	SAMN04570269	GCA_001597545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/545/GCA_001597545.1_ASM159754v1	-	F1330
Citrobacter freundii	546	PRJNA252011	252011	Proteobacteria	Gammaproteobacteria	5.29337	51.5	-	JRTE01	63	5288	4982	10/26/15	4/4/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872775	GCA_001413195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/195/GCA_001413195.1_ASM141319v1	25501822	RU2 LB35
Leptospira santarosai	28183	PRJNA257150	257150	Spirochaetes	Spirochaetia	4.03239	41.6	-	JQRH01	288	4073	3686	2/24/16	4/5/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947897	GCA_001569285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/285/GCA_001569285.1_ASM156928v1	26833181	56164
Pantoea ananatis	553	PRJNA301127	301127	Proteobacteria	Gammaproteobacteria	4.87577	53.1	-	LMYG01	79	4608	4334	12/15/15	4/4/17	Scaffold	Embrapa Soja	SAMN04235877	GCA_001465955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/465/955/GCA_001465955.1_ASM146595v1	26893418	AMG521
Riemerella anatipestifer	34085	PRJNA308999	308999	FCB group	Bacteroidetes/Chlorobi group	2.08862	35	-	LUDV01	21	1955	1891	6/20/16	4/5/17	Contig	Sichuan Agricultural University	SAMN04419303	GCA_001670875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/670/875/GCA_001670875.1_RCAD0127	-	RCAD0127
Acinetobacter pittii	48296	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.89952	38.9	-	LLFJ01	565	3874	3615	10/27/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145675	GCA_001414705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/705/GCA_001414705.1_ASM141470v1	-	ABBL064
Xanthomonas euvesicatoria	456327	PRJNA275495	275495	Proteobacteria	Gammaproteobacteria	5.39223	64.5	-	JZLW01	173	4876	4444	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03349329	GCA_001008835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/835/GCA_001008835.1_v1	26089818	526
Pseudomonas amygdali pv. morsprunorum	129138	PRJNA287067	287067	Proteobacteria	Gammaproteobacteria	5.8838	58.1	-	LGLQ01	447	5605	5006	9/18/15	4/4/17	Contig	University of Toronto	SAMN03837768	GCA_001294215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/215/GCA_001294215.1_PmpFTRS_U7805	-	FTRS_U7805
Brucella sp. CMUL 015	1905697	PRJNA344958	344958	Proteobacteria	Alphaproteobacteria	3.32277	57.1	-	MKPY01	80	3393	3153	1/6/17	4/16/17	Contig	LAU	SAMN05853690	GCA_001937825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/825/GCA_001937825.1_ASM193782v1	-	CMUL 015
Enterobacter asburiae	61645	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	4.87372	55.6	-	LJDJ02	103	4842	4555	10/15/15	4/5/17	Contig	University of KwaZulu Natal	SAMN03792301	GCA_001316445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/445/GCA_001316445.2_ASM131644v2	-	ST252:19870317JSK
Cytophaga hutchinsonii ATCC 33406	269798	PRJNA54	54	FCB group	Bacteroidetes/Chlorobi group	4.43322	38.8	chromosome:NC_008255.1/CP000383.1	-	1	3769	3690	7/11/06	5/18/17	Complete Genome	DOE Joint Genome Institute	SAMN02598536	GCA_000014145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/145/GCA_000014145.1_ASM1414v1	17400776	ATCC 33406
Vibrio alginolyticus	663	PRJNA295769	295769	Proteobacteria	Gammaproteobacteria	5.86221	44.2	-	LJTH01	95	5540	5294	10/5/15	4/4/17	Contig	UC Davis	SAMN04088220	GCA_001306875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/875/GCA_001306875.1_ASM130687v1	-	UCD-9C
Pseudoalteromonas sp. ECSMB14103	1580062	PRJNA269322	269322	Proteobacteria	Gammaproteobacteria	4.1074	39.7	-	JWGY01	32	3828	3665	1/2/15	4/10/17	Contig	shanghai ocean university	SAMN03253078	GCA_000813065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/065/GCA_000813065.1_ASM81306v1	25908138	ECSMB14103
Pseudomonas savastanoi pv. retacarpa	663708	PRJNA381903	381903	Proteobacteria	Gammaproteobacteria	5.72532	58.1	-	NBYW01	316	5485	4920	4/28/17	5/3/17	Scaffold	SAVASTOVAR	SAMN06691537	GCA_002115545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/545/GCA_002115545.1_ASM211554v1	-	CECT 4861
Pseudomonas syringae pv. tomato	323	PRJNA357646	357646	Proteobacteria	Gammaproteobacteria	6.27706	58.6	-	MSDS01	143	5990	5683	3/13/17	3/15/17	Contig	University of Exeter	SAMN06157973	GCA_002024925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/925/GCA_002024925.1_ASM202492v1	28207977	PT23
Achromobacter xylosoxidans	85698	PRJNA343957	343957	Proteobacteria	Betaproteobacteria	6.82965	67.5	-	MJMP01	42	6339	6182	1/19/17	4/6/17	Contig	University Laval	SAMN05806738	GCA_001957055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/957/055/GCA_001957055.1_ASM195705v1	-	4124363476
Streptococcus oralis subsp. tigurinus 2425	1333864	PRJNA202967	202967	Terrabacteria group	Firmicutes	1.87183	41	-	ASWZ01	15	1918	1778	7/31/13	4/1/17	Contig	"Geneva University Hospitals, Genomic Research Laboratory"	SAMN02469816	GCA_000442155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/155/GCA_000442155.1_2425.1	24478475	2425
Acinetobacter nosocomialis	106654	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.01599	38.6	-	NGIH01	41	3817	3694	5/16/17	5/24/17	Contig	JCVI	SAMN06892317	GCA_002145205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/145/205/GCA_002145205.1_ASM214520v1	-	ARLG1930
Klebsiella variicola	244366	PRJEB7831	268465	Proteobacteria	Gammaproteobacteria	5.40702	57.2	-	CXPB01	88	5382	5042	7/24/15	2/21/17	Contig	INSTITUTO NACIONAL DE SALUD	SAMEA3488479	GCA_001261855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/855/GCA_001261855.1_Kv4880	-	-
Rhodococcus hoagii	43767	PRJNA316970	316970	Terrabacteria group	Actinobacteria	5.05816	68.8	-	LWHT01	25	4710	4599	4/18/17	6/6/17	Contig	The University of Edinburgh	SAMN04632003	GCA_002095085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/085/GCA_002095085.1_ASM209508v1	27638249	PAM1340
Staphylococcus capitis	29388	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.59971	32.9	-	JVVH01	194	2445	2377	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197261	GCA_001060815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/815/GCA_001060815.1_ASM106081v1	26230489	129_SAUR
Staphylococcus hominis	1290	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.27844	31.3	-	JVOX01	50	2221	2165	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197427	GCA_001070775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/775/GCA_001070775.1_ASM107077v1	26230489	238_SHAE
Lactobacillus paracasei subsp. paracasei Lpp219	1256196	PRJNA178423	178423	Terrabacteria group	Firmicutes	3.05908	46.3	-	ANJS01	238	3242	2852	6/11/13	4/1/17	Contig	Danone Research	SAMN02469710	GCA_000410195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/195/GCA_000410195.1_ASM41019v1	23894338	Lpp219
Gardnerella vaginalis 101	904144	PRJNA53359	53359	Terrabacteria group	Actinobacteria	1.5275	43.4	-	AEJD01	43	1226	1158	10/25/10	3/30/17	Contig	Virginia Commonwealth University	SAMN02472073	GCA_000165615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/165/615/GCA_000165615.2_ASM16561v2	-	101
Aggregatibacter actinomycetemcomitans serotype e str. SCC393	907489	PRJNA53933	53933	Proteobacteria	Gammaproteobacteria	2.25404	44.3	-	AEJN02	106	2278	2040	9/29/11	4/4/17	Scaffold	University of Southern California School of Dentistry	SAMN02471949	GCA_000226775.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/775/GCA_000226775.3_AaSCC393v2.0	23194436	SCC393
Lactobacillus crispatus	47770	PRJNA290636	290636	Terrabacteria group	Firmicutes	2.24296	36.9	-	LJOK01	259	2400	2146	1/26/16	4/4/17	Scaffold	Vaginal Microbiome Consortium	SAMN03893603	GCA_001541515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/515/GCA_001541515.1_ASM154151v1	26747455	VMC5
Mycobacterium kansasii	1768	PRJNA374853	374853	Terrabacteria group	Actinobacteria	6.34722	66	-	MWQA01	30	5752	5410	4/11/17	4/11/17	Scaffold	University of Lodz	SAMN06368474	GCA_002086915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/915/GCA_002086915.1_ASM208691v1	-	12MK
Pectobacterium carotovorum subsp. brasiliense	180957	PRJNA288624	288624	Proteobacteria	Gammaproteobacteria	4.82028	52	-	LGRF01	33	4332	4169	8/5/15	4/3/17	Contig	University of South Africa	SAMN03835252	GCA_001238575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/575/GCA_001238575.1_ASM123857v1	-	BD255
Streptococcus equinus	1335	PRJEB16965	351065	Terrabacteria group	Firmicutes	1.86412	37.1	-	FOFQ01	23	1815	1737	10/29/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216477	GCA_900110935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/935/GCA_900110935.1_IMG-taxon_2651870309_annotated_assembly	-	MPR1
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.76029	47.6	-	MECI01	79	3487	3306	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320418	GCA_001883065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/065/GCA_001883065.1_ASM188306v1	-	05/0297-5eye
Escherichia albertii	208962	PRJDB3047	301492	Proteobacteria	Gammaproteobacteria	4.85368	49.7	-	BBVV01	78	4992	4627	11/6/15	2/25/17	Scaffold	University of Miyazaki	SAMD00026633	GCA_001514905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/905/GCA_001514905.1_ASM151490v1	26537224	EC03-195
Lactobacillus johnsonii	33959	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.86381	34.3	-	DBZQ01	33	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06457168	GCA_002311195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/195/GCA_002311195.1_ASM231119v1	28894102	-
Flavobacterium psychrophilum	96345	PRJNA335402	335402	FCB group	Bacteroidetes/Chlorobi group	2.8891	32.4	-	MTBZ01	94	2670	2526	5/19/17	5/24/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05504826	GCA_002150215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/215/GCA_002150215.1_ASM215021v1	-	FPG92
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.13403	67.5	-	LOVF01	104	6460	6120	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449195	GCA_001523315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/315/GCA_001523315.1_ASM152331v1	-	MSMB1164
Aeromonas hydrophila AD9	1453502	PRJNA236257	236257	Proteobacteria	Gammaproteobacteria	4.90707	61.3	-	JFJO01	221	4582	4376	4/11/14	4/2/17	Contig	University of Minnesota	SAMN02673382	GCA_000626755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/755/GCA_000626755.1_A._veronii_AD9	25035334	AD9
Pseudomonas stutzeri	316	PRJDB3357	295168	Proteobacteria	Gammaproteobacteria	4.18801	64.2	-	BBQQ01	30	3939	3808	9/8/15	4/4/17	Contig	National Institute of Advanced Industrial Science and Technology (AIST)	SAMD00023464	GCA_001294145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/145/GCA_001294145.1_ASM129414v1	26494664	KF716
Paenibacillus polymyxa	1406	PRJNA243331	243331	Terrabacteria group	Firmicutes	5.98958	45.6	-	LYMY01	203	5285	5045	8/23/16	4/5/17	Contig	FDA/CFSAN	SAMN04990131	GCA_001709135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/135/GCA_001709135.1_ASM170913v1	-	CFSAN034342
Vibrio sp. 712i1	1234592	PRJNA175605	175605	Proteobacteria	Gammaproteobacteria	5.25101	44.7	-	ANBX01	168	4980	4488	12/4/12	5/19/17	Contig	San Diego State University	SAMN02470876	GCA_000316925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/925/GCA_000316925.1_712i1	-	712i1
Staphylococcus saprophyticus	29385	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.61394	33	-	LMYX01	34	2592	2406	9/28/16	4/5/17	Scaffold	Tufts University	SAMN04244239	GCA_001747235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/235/GCA_001747235.1_ASM174723v1	-	B2
Streptococcus sanguinis	1305	PRJNA280669	280669	Terrabacteria group	Firmicutes	2.31267	43.2	-	LAWE01	63	2285	2191	3/11/16	4/5/17	Contig	University of Malaya	SAMN03480635	GCA_001588875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/875/GCA_001588875.1_ASM158887v1	-	FSS4
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.21799	36.7	-	LPRT01	12	2329	2171	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305154	GCA_001560285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/285/GCA_001560285.1_GG12_C01_21	-	GG12-C01-21
Bacillus weihenstephanensis	86662	PRJEB14962	336312	Terrabacteria group	Firmicutes	4.93817	35.6	-	FMJH01	33	5313	4965	9/8/16	6/16/17	Scaffold	INRA-MIG	SAMEA4361421	GCA_900095005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/005/GCA_900095005.1_ASM90009500v1	-	INRA_SL'
Bifidobacterium breve	1685	PRJDB4597	325619	Terrabacteria group	Actinobacteria	2.6608	59.2	-	BCXL01	101	2365	2066	6/10/16	4/5/17	Contig	Yakult Central Institute	SAMD00047596	GCA_001685705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/705/GCA_001685705.1_ASM168570v1	27340092	BR-06
Bartonella quintana str. Toulouse	283165	PRJNA44	44	Proteobacteria	Alphaproteobacteria	1.58138	38.8	chromosome:NC_005955.1/BX897700.1	-	1	1385	1219	6/24/04	4/10/17	Complete Genome	Uppsala Univ.	SAMEA3138248	GCA_000046685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/046/685/GCA_000046685.1_ASM4668v1	15210978	Toulouse
Moraxella catarrhalis	480	PRJNA297370	297370	Proteobacteria	Gammaproteobacteria	1.88122	41.6	-	LXHH01	30	1760	1606	6/3/16	4/5/17	Contig	Drexel University College of Medicine	SAMN04122845	GCA_001656255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/255/GCA_001656255.1_ASM165625v1	26912404	Z18
Lactobacillus salivarius	1624	PRJNA321782	321782	Terrabacteria group	Firmicutes	2.20692	32.7	-	LXZL01	124	2287	2091	9/12/17	9/14/17	Contig	Seoul National University	SAMN05003799	GCA_002289685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/685/GCA_002289685.1_ASM228968v1	-	KLF003
Klebsiella oxytoca OK-1	1256995	PRJNA181050	181050	Proteobacteria	Gammaproteobacteria	5.73892	55.2	-	JAKY01	79	5440	5255	1/31/14	2/21/17	Contig	JCVI	SAMN02641584	GCA_000527235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/235/GCA_000527235.1_KoxOK1v1.0	-	OK-1
Cronobacter sakazakii	28141	PRJNA251875	251875	Proteobacteria	Gammaproteobacteria	4.61893	56.7	-	JOLY01	80	4466	4224	10/9/15	4/4/17	Scaffold	"Nottingham Trent University, UK"	SAMN02840983	GCA_001309375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/375/GCA_001309375.1_ASM130937v1	26438044	703
Anabaena cylindrica PCC 7122	272123	PRJNA43355	43355	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.06328	38.7952	chromosome:NC_019771.1/CP003659.1; plasmid pANACY.01:NC_019772.1/CP003660.1; plasmid pANACY.02:NC_020157.1/CP003661.1; plasmid pANACY.03:NC_019773.1/CP003662.1; plasmid pANACY.04:NC_019774.1/CP003663.1; plasmid pANACY.05:NC_020056.1/CP003664.1; plasmid pANACY.06:NC_019775.1/CP003665.1	-	7	6195	5834	12/7/12	5/18/17	Complete Genome	DOE Joint Genome Institute	SAMN02232008	GCA_000317695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/695/GCA_000317695.1_ASM31769v1	-	PCC 7122
Proteus mirabilis	584	PRJNA254477	254477	Proteobacteria	Gammaproteobacteria	4.01998	38.7	-	LANL01	108	3782	3566	4/13/15	4/3/17	Contig	Canadian Food Inspection Agency	SAMN03437553	GCA_000972665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/665/GCA_000972665.1_ASM97266v1	-	25933 GTA
Mycoplasma bovis	28903	PRJNA306895	306895	Terrabacteria group	Tenericutes	0.94154	29.3	-	LQEW01	76	803	726	1/4/17	4/6/17	Contig	"University of California, Davis"	SAMN04366544	GCA_001930545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/545/GCA_001930545.1_ASM193054v1	-	2769MB
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.47644	32.7	-	CUFA01	73	2431	2328	3/31/15	3/26/17	Contig	SC	SAMEA1035056	GCA_001227205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/205/GCA_001227205.1_7067_4_91	-	95671
Propionibacterium acnes HL025PA2	765090	PRJNA49213	49213	Terrabacteria group	Actinobacteria	2.47846	60	-	ADZO01	21	2494	2365	7/28/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189203	GCA_000144145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/145/GCA_000144145.1_ASM14414v1	-	HL025PA2
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.64868	67.5	-	LOXE01	81	6043	5765	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449256	GCA_001524305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/305/GCA_001524305.1_ASM152430v1	-	FL-7-5-30-S2-D0
Burkholderia sp. UYPR1.413	1080179	PRJNA165303	165303	Proteobacteria	Betaproteobacteria	10.3639	62.3	-	JAFD01	336	9686	8932	1/10/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02584916	GCA_000519245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/245/GCA_000519245.1_ASM51924v1	-	UYPR1.413
Campylobacter coli CVM 41957	1440024	PRJNA232314	232314	Proteobacteria	delta/epsilon subdivisions	1.71414	31.4	-	JAJZ01	53	1774	1669	10/29/15	3/18/17	Scaffold	FDA/CVM	SAMN02887125	GCA_001419355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/355/GCA_001419355.1_Campylobacter_coli_CVM_41957_v1.0	-	CVM 41957
Lactobacillus brevis	1580	PRJNA378171	378171	Terrabacteria group	Firmicutes	2.64494	45.6	-	MZMW01	22	2636	2533	4/17/17	4/21/17	Contig	CERELA-CONICET	SAMN06480772	GCA_002093065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/065/GCA_002093065.1_ASM209306v1	-	CRL 2013
Mannheimia haemolytica	75985	PRJNA181191	181191	Proteobacteria	Gammaproteobacteria	2.63879	41.1	-	LFXX01	116	2749	2564	3/23/16	4/5/17	Contig	Agriculture and Agri-Food Canada	SAMN03840562	GCA_001596565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/565/GCA_001596565.1_ASM159656v1	26926339	L02A
Helicobacter pylori OK310	1248726	PRJDB694	192818	Proteobacteria	delta/epsilon subdivisions	1.59544	38.7937	chromosome:NC_020509.1/AP012601.1; plasmid pHPOK310:NC_020556.1/AP012602.1	-	2	1575	1443	3/11/13	3/23/17	Complete Genome	University of Tokyo	SAMD00061057	GCA_000348885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/885/GCA_000348885.1_ASM34888v1	23505045	OK310
Serratia marcescens MC620	1333585	PRJNA203061	203061	Proteobacteria	Gammaproteobacteria	5.25981	59.2	-	ATOG01	138	5064	4855	7/3/13	3/24/17	Scaffold	The Genome Institute	SAMN02436761	GCA_000418815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/815/GCA_000418815.1_S_marcescensMC620-1.0	-	MC620
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.1911	39.9	-	FPIE01	63	1091	986	5/10/17	5/24/17	Scaffold	WTSI	SAMEA893069	GCA_900118535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/535/GCA_900118535.1_4880_2_10	-	A22
Leuconostoc mesenteroides subsp. cremoris	33965	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.64019	38	-	MPAP01	124	1748	1410	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981466	GCA_002092155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/155/GCA_002092155.1_ASM209215v1	28217118	LMGCF04
Anaplasma phagocytophilum	948	PRJEB13033	321622	Proteobacteria	Alphaproteobacteria	1.64135	42.2	-	FLMA01	230	1342	1122	6/2/16	4/5/17	Scaffold	INRA-MIG	SAMEA4018762	GCA_900088605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/605/GCA_900088605.1_ANAPC2	-	C2
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.07794	41.6	-	JJOR01	189	3516	3298	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708960	GCA_000979335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/335/GCA_000979335.1_gtlEnvA5udCFS	25756680	2.F.A.2.3
Dehalococcoides mccartyi	61435	PRJNA265807	265807	Terrabacteria group	Chloroflexi	1.46251	47.1	-	JSWM01	7	1582	1515	1/15/16	4/5/17	Contig	National University of Singapore	SAMN03143573	GCA_001515295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/295/GCA_001515295.1_ASM151529v1	-	JNA
Yersinia enterocolitica subsp. palearctica PhRBD_Ye1	1071969	PRJNA71137	71137	Proteobacteria	Gammaproteobacteria	4.36739	46.9	-	AGQO01	112	4103	3785	10/17/11	5/19/17	Contig	St Luke's Medical Center - Quezon City	SAMN02404397	GCA_000230775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/775/GCA_000230775.2_ASM23077v2	22207747	PhRBD_Ye1
Helicobacter pylori B8	693745	PRJEA41831	41831	Proteobacteria	delta/epsilon subdivisions	1.68003	38.7896	chromosome:NC_014256.1/FN598874.1; plasmid HPB8p:NC_014257.1/FN665651.1	-	2	1637	1488	6/15/10	3/22/17	Complete Genome	"CeBitec, Bielefeld University"	SAMEA2272698	GCA_000196755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/755/GCA_000196755.1_ASM19675v1	20507619	B8
Streptococcus gordonii	1302	PRJNA304333	304333	Terrabacteria group	Firmicutes	2.23262	40.6	-	LQRC01	51	2176	2155	3/2/16	3/24/16	Scaffold	University of Kaiserslautern	SAMN04324326	GCA_001578795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/795/GCA_001578795.1_ASM157879v1	-	DD07
[Haemophilus] ducreyi	730	PRJNA270894	270894	Proteobacteria	Gammaproteobacteria	1.59294	38.4	chromosome:CP011227.1	-	1	1557	1382	6/30/15	7/23/15	Chromosome	Indiana University School of Medicine	SAMN03271821	GCA_001043415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/415/GCA_001043415.1_ASM104341v1	-	CLU5
Corynebacterium diphtheriae bv. gravis str. ISS 4749	1450523	PRJNA235384	235384	Terrabacteria group	Actinobacteria	2.36648	53.5	-	JAQQ01	40	2269	2106	6/5/15	4/3/17	Contig	"Northumbria University, Newcastle"	SAMN02837550	GCA_001188005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/005/GCA_001188005.1_ASM118800v1	26452736	ISS 4749
Sinorhizobium meliloti GVPV12	1041153	PRJNA165341	165341	Proteobacteria	Alphaproteobacteria	7.07629	62	-	ATZC01	106	6990	6386	7/15/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02440602	GCA_000428005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/005/GCA_000428005.1_ASM42800v1	-	GVPV12
Bordetella bronchiseptica MBORD670	1331226	PRJNA202138	202138	Proteobacteria	Betaproteobacteria	5.16903	68.2	-	JGXN01	80	4927	4775	5/12/14	4/2/17	Contig	JCVI	SAMN02231438	GCA_000689795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/795/GCA_000689795.1_gbb30v01	25908122	MBORD670
Lactobacillus reuteri ATCC 53608	927703	PRJEA63411	63411	Terrabacteria group	Firmicutes	2.09124	38.7846	chromosome:NZ_LN906634.1/LN906634.1; plasmid ATCC53608 Plasmid I:NZ_LN906635.1/LN906635.1; plasmid ATCC53608 Plasmid II:NZ_LN906636.1/LN906636.1	-	3	2088	1918	11/17/15	5/18/17	Complete Genome	"Institute of Food Research, Norwich"	SAMEA2272605	GCA_000236455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/455/GCA_000236455.2_ASM23645v2	"2,137,933,926,626,320"	ATCC 53608
Enterococcus casseliflavus	37734	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.25579	42.9	-	DGGA01	11	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453884	GCA_002391965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/965/GCA_002391965.1_ASM239196v1	28894102	-
Clostridium sporogenes	1509	PRJNA266242	266242	Terrabacteria group	Firmicutes	2.83397	26.8	-	LAGG01	361	-	-	3/27/15	3/27/15	Contig	Centers for Disease Control and Prevention	SAMN03169468	GCA_000965435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/435/GCA_000965435.1_ASM96543v1	-	CDC24442
Helicobacter pylori P12	570508	PRJNA32291	32291	Proteobacteria	delta/epsilon subdivisions	1.68404	38.7775	chromosome:NC_011498.1/CP001217.1; plasmid HPP12:NC_011499.1/CP001218.1	-	2	1664	1471	10/30/08	3/22/17	Complete Genome	"Max von Pettenkofer-Institut für Hygiene und Medizinische Mikrobiologie, Ludwig-Maximilians-Universität München"	SAMN02603595	GCA_000021465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/465/GCA_000021465.1_ASM2146v1	20478826	P12
Lactobacillus rhamnosus LRHMDP3	1203259	PRJNA169313	169313	Terrabacteria group	Firmicutes	2.91193	46.6	-	AMQX01	47	2975	2825	11/9/12	3/31/17	Contig	"Westmead Centre for Oral Health and Westmead Millennium  Institute, Westmead Hostpital"	SAMN01757838	GCA_000311965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/965/GCA_000311965.1_ASM31196v1	23405363	LRHMDP3
Pasteurella multocida P1933	1298927	PRJNA191138	191138	Proteobacteria	Gammaproteobacteria	2.44169	40.3	-	ARNY01	269	2420	2291	6/18/13	4/1/17	Contig	Moredun Research Institute	SAMN02470559	GCA_000412015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/015/GCA_000412015.1_P1933	-	P1933
[Haemophilus] parasuis	738	PRJNA301181	301181	Proteobacteria	Gammaproteobacteria	2.18609	40	-	MNAP01	139	2177	1955	1/6/17	4/6/17	Scaffold	Chinese Academy of Agricultural Sciences	SAMN04230877	GCA_001938205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/205/GCA_001938205.1_ASM193820v1	-	H12
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.1266	41.2	-	CWCN01	75	2055	1877	6/23/15	3/26/17	Contig	SC	SAMEA1032763	GCA_001175265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/265/GCA_001175265.1_6903_6_12	-	EQUI0157
Bifidobacterium bifidum	1681	PRJDB4597	325619	Terrabacteria group	Actinobacteria	2.18443	62.6	-	BCXK01	26	1835	1658	6/10/16	4/5/17	Contig	Yakult Central Institute	SAMD00047595	GCA_001685685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/685/GCA_001685685.1_ASM168568v1	27340092	BI-14
Alteromonas macleodii	28108	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.873	44.1	-	DFPE01	392	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457865	GCA_002377105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/105/GCA_002377105.1_ASM237710v1	28894102	-
Yersinia frederiksenii	29484	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.68118	47.6	-	CGCI01	50	4241	4079	3/15/15	4/4/17	Scaffold	SC	SAMEA859967	GCA_001319985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/985/GCA_001319985.1_4821_5_10	-	FCF467
Bacillus mycoides	1405	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.45636	35.2	-	NIUP01	52	5778	5431	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07205612	GCA_002200005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/005/GCA_002200005.1_ASM220000v1	-	MOD1_Bc228
Comamonas testosteroni	285	PRJDB5621	386474	Proteobacteria	Betaproteobacteria	5.85773	61.2	-	BDQJ01	5	5433	5234	5/11/17	5/31/17	Scaffold	shizuoka University	SAMD00076718	GCA_002157685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/685/GCA_002157685.1_ASM215768v1	-	R2
Stenotrophomonas maltophilia 5BA-I-2	1429851	PRJNA229945	229945	Proteobacteria	Gammaproteobacteria	4.56805	66.4	-	AZAE01	4	4151	4037	2/4/14	3/24/17	Contig	"Faculty of Science, Charles University"	SAMN02641498	GCA_000543365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/365/GCA_000543365.1_Assembly_for_Stenotrophomonas_maltophilia_5BA-I-2	24604648	5BA-I-2
Bacillus amyloliquefaciens	1390	PRJNA293779	293779	Terrabacteria group	Firmicutes	3.97818	46.1	-	LMAG01	29	3935	3751	11/4/15	4/4/17	Scaffold	OSMANIA UNIVERISTY	SAMN04009787	GCA_001431285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/285/GCA_001431285.1_ASM143128v1	26823600	RHNK22
Bifidobacterium animalis	28025	PRJEB18553	373869	Terrabacteria group	Actinobacteria	1.93843	60.4	-	FTRE01	46	1654	1582	2/8/17	4/6/17	Contig	University of Tromso	SAMEA51823168	GCA_900157135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/135/GCA_900157135.1_Bifido_11_v1	-	-
Chlamydia psittaci 08DC60	1112267	PRJNA77107	77107	PVC group	Chlamydiae	1.21636	39.2	-	ATKY01	84	1074	953	6/25/13	4/1/17	Scaffold	University of Maryland School of Medicine	SAMN00860215	GCA_000415705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/705/GCA_000415705.1_ASM41570v1	-	08DC60
Enterococcus faecium	1352	PRJNA292790	292790	Terrabacteria group	Firmicutes	3.28517	37.7103	chromosome:NZ_CP012436.1/CP012436.1; plasmid ISMMS_VRE2_p1:NZ_CP012437.1/CP012437.1; plasmid ISMMS_VRE2_p2:NZ_CP012439.1/CP012439.1; plasmid ISMMS_VRE2_p3:NZ_CP012438.1/CP012438.1	-	4	3406	3097	9/7/16	4/17/17	Chromosome	Mount Sinai School of Medicine	SAMN03988550	GCA_001720965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/965/GCA_001720965.1_ASM172096v1	28301471	ISMMS_VRE_2
Neisseria gonorrhoeae SK-93-1035	528360	PRJNA32807	32807	Proteobacteria	Betaproteobacteria	2.14498	52.3	-	ABZQ01	40	2334	2061	12/15/08	4/11/17	Scaffold	Broad Institute	SAMN02595248	GCA_000156975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/975/GCA_000156975.1_ASM15697v1	-	SK-93-1035
Streptococcus mutans TCI-162	1074134	PRJNA72017	72017	Terrabacteria group	Firmicutes	1.81787	37	-	AGKW01	130	1854	1741	10/6/11	3/22/17	Contig	JCVI	SAMN02436603	GCA_000229105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/105/GCA_000229105.2_SMUT5-NEX_3-162	-	TCI-162
Borrelia garinii IPT95	1408833	PRJNA223339	223339	Spirochaetes	Spirochaetia	0.157477	27.3	-	AYAI01	194	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378800	GCA_000501035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/035/GCA_000501035.1_BorGarIPT95	-	IPT95
Streptococcus dysgalactiae subsp. equisimilis	119602	PRJNA381604	381604	Terrabacteria group	Firmicutes	2.09561	39.2	-	NBUZ01	80	2033	1909	4/17/17	4/21/17	Scaffold	Haukeland University Hospital	SAMN06688436	GCA_002094215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/215/GCA_002094215.1_ASM209421v1	-	-
Microcystis aeruginosa FCY-28	1163388	PRJNA91063	91063	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.62944	43.3	-	AJUT01	1905	-	-	6/15/17	6/15/17	Contig	Hanyang University	SAMN07248037	GCA_002196425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/425/GCA_002196425.1_MaFCY28-1.0	22814493	FCY-28
Enterococcus faecalis TX1302	749513	PRJNA47181	47181	Terrabacteria group	Firmicutes	2.88376	37.5	-	AEBK01	32	2912	2798	8/30/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189123	GCA_000147495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/495/GCA_000147495.1_ASM14749v1	-	TX1302
Brucella suis F5/05-4	1169238	PRJNA173499	173499	Proteobacteria	Alphaproteobacteria	3.34894	57.2	-	AQLC01	5	3412	3167	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN00839696	GCA_000371205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/205/GCA_000371205.1_Bruc_suis_F5_05-4_V1	-	F5/05-4
Clavibacter michiganensis subsp. michiganensis	33013	PRJNA379102	379102	Terrabacteria group	Actinobacteria	3.39151	72.6	-	MZMP01	5	3184	3055	3/24/17	8/7/17	Contig	Canadian Food Inspection Agency	SAMN06579286	GCA_002240575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/575/GCA_002240575.1_ASM224057v1	-	LMG 7333
Rhizobium leguminosarum	384	PRJNA247571	247571	Proteobacteria	Alphaproteobacteria	7.27343	59.9	-	JUHT01	54	6936	6646	12/9/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02787141	GCA_000799975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/975/GCA_000799975.1_ASM79997v1	-	YR374
Treponema pallidum subsp. pallidum	161	PRJNA322283	322283	Spirochaetes	Spirochaetia	1.13913	52.8	chromosome:NZ_CP016051.1/CP016051.1	-	1	1067	1005	8/25/16	4/10/17	Chromosome	"National Institute of Health, Portugal"	SAMN05150356	GCA_001712975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/975/GCA_001712975.1_ASM171297v1	-	PT_SIF1002
Borrelia burgdorferi IPT137	1408881	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.20531	28.2	-	AYCE01	164	1268	745	12/3/13	4/2/17	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378848	GCA_000501535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/535/GCA_000501535.1_BorBurgIPT137	-	IPT137
Burkholderia multivorans	87883	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.77001	67	-	LPGO01	94	6387	6054	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449514	GCA_001531425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/425/GCA_001531425.1_ASM153142v1	-	MSMB1641WGS
Clostridium botulinum	1491	PRJNA301985	301985	Terrabacteria group	Firmicutes	4.25258	27.9319	chromosome:NZ_CP013857.1/CP013857.1; plasmid pNPD8_1:NZ_CP013858.1/CP013858.1	-	26	4174	3708	1/13/17	4/10/17	Chromosome	Los Alamos National Laboratory	SAMN04262347	GCA_001951135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/135/GCA_001951135.2_ASM195113v2	-	CDC_69096
Burkholderia thailandensis	57975	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.97013	67.5	-	LNNG01	4	6795	6113	2/9/16	4/10/17	Contig	Northern Arizona University	SAMN04196787	GCA_001555485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/485/GCA_001555485.1_ASM155548v1	-	2002721621
Aliivibrio fischeri	668	PRJNA318805	318805	Proteobacteria	Gammaproteobacteria	4.24291	38.3	-	MAJY01	103	3996	3855	7/21/16	4/5/17	Scaffold	Massachusetts Institute of Technology	SAMN04867925	GCA_001691135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/135/GCA_001691135.1_ASM169113v1	-	ZF47
Porphyromonas gingivalis	837	PRJEB10280	362716	FCB group	Bacteroidetes/Chlorobi group	2.25735	48.5	-	FUFI01	53	2026	1829	2/2/17	4/6/17	Scaffold	"Melbourne Dental School, University of Melbourne"	SAMEA3505351	GCA_900157235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/235/GCA_900157235.1_YH522	-	SU60
Helicobacter pylori F30	866345	PRJDA50591	50591	Proteobacteria	delta/epsilon subdivisions	1.57969	38.7728	chromosome:NC_017365.1/AP011941.1; plasmid pHPF30:NC_017369.1/AP011942.1	-	2	1569	1427	1/8/11	9/18/17	Complete Genome	The University of Tokyo	SAMD00060972	GCA_000270025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/025/GCA_000270025.1_ASM27002v1	"2,121,236,221,575,170"	F30
Lactobacillus fermentum	1613	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.93581	52.1	-	JUTH01	169	1945	1741	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197989	GCA_001077025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/025/GCA_001077025.1_ASM107702v1	26230489	779_LFER
Bifidobacterium adolescentis	1680	PRJNA261982	261982	Terrabacteria group	Actinobacteria	2.26346	59.6	-	JRNZ01	145	1939	1650	1/29/15	4/2/15	Contig	University of Nebraska-Lincoln	SAMN03076346	GCA_000829865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/865/GCA_000829865.1_ASM82986v1	25616794	IVS-1
Vibrio harveyi	669	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.75818	45	-	LOSK01	2	5445	4998	12/21/15	4/4/17	Contig	US Food and Drug Administration 	SAMN03996325	GCA_001471575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/575/GCA_001471575.1_ASM147157v1	-	LMG 4044
Salinispora arenicola CNR416	1298918	PRJNA190782	190782	Terrabacteria group	Actinobacteria	5.18161	69.5	-	AUEJ01	97	4857	4538	7/10/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02440635	GCA_000425925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/925/GCA_000425925.1_ASM42592v1	-	CNR416
Lactobacillus casei 12A	1051650	PRJNA217366	217366	Terrabacteria group	Firmicutes	2.932	46.3	-	AWZQ01	397	3218	2800	9/30/13	4/2/17	Contig	DOE Joint Genome Institute	SAMN02441122	GCA_000472345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/345/GCA_000472345.1_ASM47234v1	-	12A
Coxiella burnetii	777	PRJEB5846	249029	Proteobacteria	Gammaproteobacteria	1.99973	42.5	-	CCAL01	37	2205	1934	3/25/14	4/2/17	Contig	ANIMAL HEALTH AND VETERINARY LABORATORIES AGENCY	SAMEA3139021	GCA_000723245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/245/GCA_000723245.1_EV-Cb-BK10	-	EV-Cb_BK10
Acinetobacter pittii	48296	PRJNA312161	312161	Proteobacteria	Gammaproteobacteria	4.2168	38.7712	chromosome:NZ_CP014477.1/CP014477.1; plasmid pNDM-AP_882:NZ_CP014478.1/CP014478.1; plasmid pOXA58-AP_882:NZ_CP014479.1/CP014479.1	-	3	4040	3785	2/29/16	4/5/17	Complete Genome	UNIVERSITY OF MALAYA	SAMN04495667	GCA_001577285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/285/GCA_001577285.1_ASM157728v1	-	AP_882
Vibrio parahaemolyticus 50	1238202	PRJNA176636	176636	Proteobacteria	Gammaproteobacteria	5.06021	45.2	-	AZGT01	82	4850	4638	1/13/14	3/18/17	Scaffold	IGS	SAMN02597367	GCA_000519385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/385/GCA_000519385.2_vp50	-	50
Aeromonas salmonicida subsp. salmonicida	29491	PRJNA264317	264317	Proteobacteria	Gammaproteobacteria	4.8236	58.4	-	MIIN01	115	4641	4167	12/13/16	4/6/17	Contig	Universite Laval	SAMN05728464	GCA_001901965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/965/GCA_001901965.1_ASM190196v1	-	170-68
Streptococcus mitis	28037	PRJNA242571	242571	Terrabacteria group	Firmicutes	1.9395	40.3	-	JPFX01	7	1942	1759	7/7/14	4/2/17	Contig	Aarhus University	SAMN02836939	GCA_000722765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/765/GCA_000722765.1_ASM72276v1	25053789	SK637
Oenococcus oeni IOEB_0607	1428413	PRJNA229529	229529	Terrabacteria group	Firmicutes	1.81536	37.8	-	AZKK01	122	1826	1572	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02902414	GCA_000761595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/595/GCA_000761595.1_Oeoe_IOEB_0607_1.0	24901216	IOEB_0607
Xanthomonas oryzae ATCC 35933	1313303	PRJNA195863	195863	Proteobacteria	Gammaproteobacteria	4.28563	63.9	-	AXVI01	264	4312	3425	10/25/13	3/24/17	Scaffold	DOE Joint Genome Institute	SAMN02440720	GCA_000482445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/445/GCA_000482445.1_ASM48244v1	-	ATCC 35933
Campylobacter fetus subsp. testudinum	1507806	PRJNA285167	285167	Proteobacteria	delta/epsilon subdivisions	1.80051	33	-	LFLN01	147	1782	1699	8/5/16	4/5/17	Contig	Utrecht University	SAMN03741801	GCA_001699295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/295/GCA_001699295.1_ASM169929v1	27333878	12S02847-1
Bartonella tribocorum	85701	PRJEB5999	242930	Proteobacteria	Alphaproteobacteria	2.63118	38.7661	chromosome I:NZ_HG969192.1/HG969192.1; plasmid II:NZ_HG969193.1/HG969193.1	-	2	2402	2183	4/3/14	4/9/17	Complete Genome	URMITE	SAMEA3139006	GCA_000689355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/355/GCA_000689355.1_PRJEB5999_assembly_1	-	BM1374166
Leptospira borgpetersenii	174	PRJNA257146	257146	Spirochaetes	Spirochaetia	3.92506	40	-	JQRV01	198	3760	3470	2/24/16	4/5/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947887	GCA_001568445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/445/GCA_001568445.1_ASM156844v1	26833181	56142
Lactobacillus delbrueckii subsp. bulgaricus	1585	PRJEB5827	240980	Terrabacteria group	Firmicutes	1.81801	49.7	-	CCEU01	14	1906	1617	6/23/14	4/2/17	Scaffold	INRA-MIG	SAMEA2580781	GCA_000751895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/895/GCA_000751895.1_LBVIB44_V12	-	-
Yersinia pseudotuberculosis	633	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.68283	47.4	-	CQEA01	87	4351	4082	3/23/15	4/3/17	Contig	SC	SAMEA859903	GCA_001157205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/205/GCA_001157205.1_5139_3_9	-	IP33054
Brucella abortus	235	PRJNA400357	400357	Proteobacteria	Alphaproteobacteria	3.30293	57.1708	chromosome 1:CP023213.1; chromosome 2:CP023214.1	-	2	3399	2971	9/12/17	9/12/17	Chromosome	IZSM-Portici	SAMN07572670	GCA_002291205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/205/GCA_002291205.1_ASM229120v1	-	33295
Chlamydia psittaci M56	1218357	PRJNA171917	171917	PVC group	Chlamydiae	1.16894	38.7619	chromosome:NC_018623.1/CP003795.1; plasmid pcpM56:NC_018635.1/CP003814.1	-	2	1030	957	9/19/12	3/30/17	Complete Genome	"University of Maryland, Baltimore"	SAMN02604211	GCA_000298495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/495/GCA_000298495.2_ASM29849v2	23209198	M56
Streptococcus salivarius	1304	PRJNA320256	320256	Terrabacteria group	Firmicutes	2.32125	39.5	-	LXIH01	87	2179	2058	12/16/16	4/6/17	Contig	State University of Campinas	SAMN04933464	GCA_001906915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/915/GCA_001906915.1_ASM190691v1	-	34-24 S10
Shigella boydii	621	PRJNA288162	288162	Proteobacteria	Gammaproteobacteria	4.14741	51.1	-	LPTT01	800	4613	3882	12/15/16	2/26/17	Contig	"University of Maryland, School of Medicine"	SAMN04001687	GCA_001906105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/105/GCA_001906105.1_ASM190610v1	-	600266
Clostridioides difficile T20	1215060	PRJEB189	222735	Terrabacteria group	Firmicutes	3.81597	28.3	-	CAMC01	210	3519	3378	10/14/13	3/15/17	Scaffold	LPBA	SAMEA3138817	GCA_000499505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/505/GCA_000499505.1_T20	24482682	T20
Acinetobacter nosocomialis	106654	PRJNA270223	270223	Proteobacteria	Gammaproteobacteria	4.06175	38.7533	chromosome:NZ_CP010368.1/CP010368.1; plasmid p6411-66.409kb:NZ_CP010903.1/CP010903.1; plasmid p6411-89.111kb:NZ_CP010369.1/CP010369.1; plasmid p6411-9.012kb:NZ_CP010370.2/CP010370.2	-	4	3908	3679	1/5/15	4/3/17	Complete Genome	JCVI	SAMN03263968	GCA_000814165.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/165/GCA_000814165.3_ASM81416v3	-	6411
Candidatus Pelagibacter ubique	198252	PRJEB9287	287342	Proteobacteria	Alphaproteobacteria	0.731292	29.9	-	CVSL01	114	-	-	6/17/15	6/17/15	Contig	UNIVERSITY OF CALIFORNIA - SAN DIEGO	SAMEA3368563	GCA_001180045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/045/GCA_001180045.1_CLC_assembled_contigs	-	SCGC AAA795-K18
Ralstonia solanacearum	305	PRJEB7430	268817	Proteobacteria	Betaproteobacteria	5.53237	66.4	-	CDMB01	1	5147	4578	1/5/15	4/3/17	Scaffold	CIRAD	SAMEA3137591	GCA_000825865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/865/GCA_000825865.2_UW163	-	UW163
Helicobacter pylori Aklavik117	1055531	PRJNA69923	69923	Proteobacteria	delta/epsilon subdivisions	1.63613	38.7292	chromosome:NC_019560.1/CP003483.1; plasmid p1HPAKL117:NC_019561.1/CP003484.1; plasmid p2HPAKL117:NC_019562.1/CP003485.1	-	3	1590	1459	11/26/12	3/23/17	Complete Genome	Washington University Medical School	SAMN02604323	GCA_000315955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/955/GCA_000315955.1_ASM31595v1	25883278	Aklavik117
Corynebacterium glutamicum	1718	PRJNA271321	271321	Terrabacteria group	Actinobacteria	3.21486	54	-	JXBH01	37	3104	2899	1/16/15	4/2/17	Contig	Jiangnan University	SAMN03274530	GCA_000819915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/915/GCA_000819915.1_ASM81991v1	-	SYPS-062
Bacillus pumilus	1408	PRJNA238961	238961	Terrabacteria group	Firmicutes	3.82649	41.5	-	JFBY01	39	3871	3773	3/28/14	4/2/17	Contig	CSIRO	SAMN02649963	GCA_000604385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/385/GCA_000604385.1_B.pum_Fairview_1.0	24744330	Fairview
Capnocytophaga sputigena	1019	PRJNA369395	369395	FCB group	Bacteroidetes/Chlorobi group	3.09862	38.7	chromosome:NZ_CP022383.1/CP022383.1	-	1	2824	2697	9/14/17	9/16/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06289150	GCA_002302595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/595/GCA_002302595.1_ASM230259v1	-	H4486
Sulfurospirillum sp. SL2-1	1986224	PRJNA385904	385904	Proteobacteria	delta/epsilon subdivisions	2.87654	38.7	chromosome:NZ_CP021416.1/CP021416.1	-	1	2943	2701	5/31/17	6/2/17	Complete Genome	Friedrich Schiller University Jena	SAMN06885934	GCA_002162315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/315/GCA_002162315.1_ASM216231v1	-	SL2-1
Burkholderia cenocepacia	95486	PRJNA279989	279989	Proteobacteria	Betaproteobacteria	7.81315	67	-	LAUA01	17	7398	7069	4/28/15	3/26/17	Contig	University of Manitoba	SAMN02045905	GCA_000981305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/305/GCA_000981305.1_ASM98130v1	-	K56-2
Lactobacillus reuteri	1598	PRJNA342243	342243	Terrabacteria group	Firmicutes	2.11057	38.5	-	MIMI01	149	2127	1970	5/11/17	5/22/17	Contig	Seoul National University	SAMN05751483	GCA_002128495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/495/GCA_002128495.1_ASM212849v1	-	KLR2001
Streptococcus thermophilus TH985	1435972	PRJNA231300	231300	Terrabacteria group	Firmicutes	1.84443	39.0114	chromosome:NZ_CM003139.1/CM003139.1	AZTM01	84	1989	1657	2/14/14	4/18/17	Chromosome	University of Padua	SAMN02442656	GCA_000836675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/836/675/GCA_000836675.1_TH985VE	24625867	TH985
Bacteroides fragilis str. DS-166	1339278	PRJNA206109	206109	FCB group	Bacteroidetes/Chlorobi group	5.16733	43.4	-	JGDD01	124	4628	4315	3/20/14	4/2/17	Contig	IGS	SAMN02314419	GCA_000598245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/245/GCA_000598245.1_ASM59824v1	-	DS-166
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.79352	50.7	-	CXGW01	413	5430	4639	7/16/15	2/24/17	Contig	SC	SAMEA1324267	GCA_001249675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/675/GCA_001249675.1_7655_8_15	-	H113020319
Helicobacter pylori	210	PRJNA245115	245115	Proteobacteria	delta/epsilon subdivisions	1.61441	38.7	chromosome:NZ_CP011483.1/CP011483.1	-	1	1622	1449	5/27/16	4/10/17	Complete Genome	Veterinary Medicine University of Vienna	SAMN02731778	GCA_001653395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/395/GCA_001653395.1_ASM165339v1	-	DU15
Bacillus licheniformis LMG 6934	1131734	PRJNA80833	80833	Terrabacteria group	Firmicutes	4.33315	45.8	-	AZSZ01	80	4380	4202	1/8/16	4/5/17	Contig	University of Ghent	SAMN04388495	GCA_001507765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/765/GCA_001507765.1_LI6934	26786044	LMG 6934
Vibrio vulnificus	672	PRJNA264981	264981	Proteobacteria	Gammaproteobacteria	4.93603	46.7	-	JSWN01	143	4609	4078	12/2/14	4/11/17	Contig	Northwestern University	SAMN03160382	GCA_000788315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/315/GCA_000788315.1_ASM78831v1	25593245	99-796 DP-E7
Pseudomonas syringae pv. avellanae str. ISPaVe037	1154762	PRJNA84321	84321	Proteobacteria	Gammaproteobacteria	5.88105	59.1	-	AKCK01	39	5378	5102	10/4/12	5/19/17	Scaffold	University of Toronto Centre for the Analysis of Genome Evolution and Function	SAMN02471963	GCA_000302815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/815/GCA_000302815.1_Pav037_1.0	22800299	ISPaVe037
Helicobacter pylori	210	PRJNA245115	245115	Proteobacteria	delta/epsilon subdivisions	1.57031	38.7	chromosome:NZ_CP011486.1/CP011486.1	-	1	1528	1375	5/27/16	3/28/17	Complete Genome	Veterinary Medicine University of Vienna	SAMN02731784	GCA_001653455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/455/GCA_001653455.1_ASM165345v1	-	K26A1
Lactobacillus reuteri	1598	PRJNA290298	290298	Terrabacteria group	Firmicutes	2.2341	38.7	chromosome:NZ_CP014786.1/CP014786.1	-	1	2217	2024	4/12/16	4/5/17	Complete Genome	Institute of Animal Husbandry and Veterinary Medicine	SAMN03879966	GCA_001618905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/905/GCA_001618905.1_ASM161890v1	-	ZLR003
endosymbiont of Bathymodiolus septemdierum str. Myojin knoll	1303921	PRJDB949	297840	Proteobacteria	Gammaproteobacteria	1.46943	38.7	chromosome Unknown:NZ_AP013042.1/AP013042.1	-	1	1569	1508	10/6/15	4/16/17	Complete Genome	Japan Agency for Marine-Earth Science and Technology	SAMD00024725	GCA_001547755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/755/GCA_001547755.1_ASM154775v1	26418631	Myojin Knoll
Acinetobacter sp. TTH0-4	1646498	PRJNA293585	293585	Proteobacteria	Gammaproteobacteria	2.96245	38.7	chromosome:NZ_CP012608.1/CP012608.1	-	1	2856	2654	9/4/15	4/6/17	Complete Genome	Cold and Arid Regions Environmental and Engineering Research Institute	SAMN04008121	GCA_001278715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/715/GCA_001278715.1_ASM127871v1	-	TTH0-4
Bifidobacterium longum subsp. longum 2-2B	1161745	PRJNA89651	89651	Terrabacteria group	Actinobacteria	2.6257	59.7	-	AJTJ01	141	2440	2132	5/4/12	4/10/17	Contig	JCVI	SAMN00829155	GCA_000261205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/205/GCA_000261205.1_Blongum22Bv1.0	23682142	2-2B
Fusobacterium nucleatum 13_3C	1357398	PRJNA212676	212676	Fusobacteria	Fusobacteriia	2.6314	27.4	-	JAOZ01	13	2521	2362	1/27/14	4/2/17	Scaffold	Broad Institute	SAMN00690715	GCA_000523555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/555/GCA_000523555.1_Fuso_nucl_13_3C_V1	-	13_3C
Agrobacterium tumefaciens	358	PRJNA319063	319063	Proteobacteria	Alphaproteobacteria	5.76813	58.4	-	LXKT01	29	5552	5345	7/22/16	4/5/17	Scaffold	Oregon State University	SAMN04901299	GCA_001692195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/195/GCA_001692195.1_ASM169219v1	27547538	N2/73
Shigella flexneri CCH060	754091	PRJNA48257	48257	Proteobacteria	Gammaproteobacteria	4.77177	51.2	-	AKMW01	80	5311	4309	6/14/12	8/4/17	Contig	Institute for Genome Sciences	SAMN00016949	GCA_000267985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/985/GCA_000267985.1_ASM26798v1	-	CCH060
Helicobacter pylori	210	PRJDB3430	277824	Proteobacteria	delta/epsilon subdivisions	1.62982	38.7	chromosome Unknown:NZ_AP014710.1/AP014710.1	-	1	1613	1382	3/7/15	4/18/17	Complete Genome	National Health Research Institutes	SAMD00024431	GCA_001549715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/715/GCA_001549715.1_ASM154971v1	25908123	ML1
Pseudomonas putida str. Idaho	1079364	PRJNA72621	72621	Proteobacteria	Gammaproteobacteria	6.36307	61.6	-	AGFJ01	839	6234	5656	9/27/11	5/19/17	Contig	Shanghai Jiao Tong University	SAMN02470932	GCA_000226475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/475/GCA_000226475.2_ASM22647v2	22123764	Idaho
Xylella fastidiosa	2371	PRJNA296551	296551	Proteobacteria	Gammaproteobacteria	2.68193	51.7	-	LJZW01	96	2584	2306	10/28/15	4/4/17	Contig	"National Research Council (C.N.R.), Institute for Sustainable Plant Protection"	SAMN04100274	GCA_001417925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/925/GCA_001417925.1_ASM141792v1	26679584	CO33
Buchnera aphidicola (Myzus persicae)	98795	PRJNA319804	319804	Proteobacteria	Gammaproteobacteria	0.643531	25.4	-	MJNC01	2	626	581	1/6/17	3/14/17	Contig	IAGC	SAMN05788880	GCA_001939165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/165/GCA_001939165.1_Buchnera_aphidicola_GOO6_v1	-	G006
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2756 C1	996820	PRJNA63737	63737	Spirochaetes	Spirochaetia	4.6993	34.9	-	AFJY02	364	4232	3820	6/7/11	4/10/17	Contig	J. Craig Venter Institute	SAMN00254324	GCA_000217575.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/575/GCA_000217575.3_CA_glsol089	-	Fiocruz LV2756 C1
Helicobacter pylori	210	PRJNA265917	265917	Proteobacteria	delta/epsilon subdivisions	1.58647	38.7	chromosome:NZ_CP010013.1/CP010013.1	-	1	1569	1410	1/9/15	3/25/17	Complete Genome	National Cheng Kung University	SAMN03154060	GCA_000817025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/025/GCA_000817025.1_ASM81702v1	25700392	Hp238
Pelosinus sp. UFO1	484770	PRJNA253596	253596	Terrabacteria group	Firmicutes	5.11541	38.7	chromosome:NZ_CP008852.1/CP008852.1	-	1	4831	4599	7/14/14	4/17/17	Complete Genome	Oak Ridge National Lab	SAMN02872985	GCA_000725345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/345/GCA_000725345.1_ASM72534v1	25189589	UFO1
Pseudothermotoga elfii DSM 9442 = NBRC 107921	1123383	PRJDB361	172330	Thermotogae	Thermotogae	2.16986	38.7	chromosome:NC_022792.1/AP014507.1	-	1	2138	2067	10/24/13	4/9/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00061030	GCA_000504085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/085/GCA_000504085.1_ASM50408v1	24676729	NBRC 107921
Helicobacter pylori OK113	1248725	PRJDB693	192817	Proteobacteria	delta/epsilon subdivisions	1.61662	38.7	chromosome:NC_020508.1/AP012600.1	-	1	1598	1422	3/11/13	3/23/17	Complete Genome	University of Tokyo	SAMD00061056	GCA_000348865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/865/GCA_000348865.1_ASM34886v1	23505045	OK113
Cyanobacterium stanieri PCC 7202	292563	PRJNA39697	39697	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.16338	38.7	chromosome:CP003940.1	-	1	2941	2837	12/7/12	7/17/13	Complete Genome	DOE Joint Genome Institute	SAMN02232010	GCA_000317655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/655/GCA_000317655.1_ASM31765v1	-	PCC 7202
Helicobacter pylori 83	585538	PRJNA34609	34609	Proteobacteria	delta/epsilon subdivisions	1.61743	38.7	chromosome:NC_017375.1/CP002605.1	-	1	1599	1432	5/11/11	3/22/17	Complete Genome	Baylor College of Medicine	SAMN00189522	GCA_000213135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/135/GCA_000213135.1_ASM21313v1	-	83
Haemophilus influenzae	727	PRJNA240637	240637	Proteobacteria	Gammaproteobacteria	1.78794	38	-	JFZK01	23	1796	1664	4/22/14	3/24/17	Contig	University of British Columbia	SAMN02678120	GCA_000636055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/055/GCA_000636055.1_NTHi411v1	-	411
Prochlorococcus marinus str. LG	167556	PRJNA246696	246696	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.75406	36.4	-	JNAT01	14	1932	1864	9/29/14	4/2/17	Contig	MIT	SAMN02769565	GCA_000760155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/155/GCA_000760155.1_ASM76015v1	25977791	LG
Mycobacterium bovis BCG str. Sweden	1195469	PRJNA167553	167553	Terrabacteria group	Actinobacteria	4.07883	65.3	-	AKYV01	1092	4450	3695	8/30/13	4/1/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control, China"	SAMN02470643	GCA_000463275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/275/GCA_000463275.1_BCG_Sweden	23977002	Sweden
Mycobacterium avium subsp. paratuberculosis Pt146	1029818	PRJNA66647	66647	Terrabacteria group	Actinobacteria	4.58255	69	-	AFPF01	955	4732	3931	6/13/11	5/19/17	Contig	The Commonwealth Scientific and Industrial Research Organisation (CSIRO)	SAMN00222096	GCA_000218095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/095/GCA_000218095.2_ASM21809v2	-	Pt146
Clostridium perfringens	1502	PRJNA327402	327402	Terrabacteria group	Firmicutes	3.5486	28	-	MARH01	56	3251	3097	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323883	GCA_001949215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/215/GCA_001949215.1_ASM194921v1	28062388	JFP774
Xanthomonas campestris pv. campestris str. CFBP 6863	1358025	PRJEB4861	359560	Proteobacteria	Gammaproteobacteria	5.00103	65.1	-	CBVH01	4	4466	4170	12/31/16	4/6/17	Scaffold	Genoscope CEA	SAMEA3158504	GCA_900036155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/155/GCA_900036155.1_20120321	-	CFBP6863
Helicobacter pylori F57	866346	PRJDA50595	50595	Proteobacteria	delta/epsilon subdivisions	1.60901	38.7	chromosome:NC_017367.1/AP011945.1	-	1	1584	1439	1/8/11	9/18/17	Complete Genome	The University of Tokyo	SAMD00060974	GCA_000270065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/065/GCA_000270065.1_ASM27006v1	"2,121,236,221,575,170"	F57
Acinetobacter oleivorans DR1	436717	PRJNA46105	46105	Proteobacteria	Gammaproteobacteria	4.15254	38.7	chromosome:NC_014259.1/CP002080.1	-	1	3999	3832	6/21/10	5/18/17	Complete Genome	"Division of Environmental Science and Ecological Engineering, Korea University"	SAMN02603211	GCA_000196795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/795/GCA_000196795.1_ASM19679v1	20639327	DR1
Staphylococcus epidermidis VCU041	904320	PRJNA53723	53723	Terrabacteria group	Firmicutes	2.58501	31.8	-	AHKX01	87	2601	2416	2/1/12	3/23/17	Contig	J. Craig Venter Institute	SAMN00117454	GCA_000245635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/635/GCA_000245635.2_ASM24563v2	-	VCU041
Pseudothermotoga lettingae TMO	416591	PRJNA15644	15644	Thermotogae	Thermotogae	2.13534	38.7	chromosome:NC_009828.1/CP000812.1	-	1	2127	2052	9/18/07	8/28/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598331	GCA_000017865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/865/GCA_000017865.1_ASM1786v1	19307556	TMO
Streptococcus pyogenes MGAS2096	370553	PRJNA16365	16365	Terrabacteria group	Firmicutes	1.86035	38.7	chromosome:NC_008023.1/CP000261.1	-	1	1809	1609	5/4/06	3/2/16	Complete Genome	Lab of Human Bacterial Pathogenesis	SAMN02603503	GCA_000013525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/525/GCA_000013525.1_ASM1352v1	16636287	MGAS2096
Pseudomonas fluorescens HK44	1042209	PRJNA67805	67805	Proteobacteria	Gammaproteobacteria	6.19515	58.7	-	AFOY02	32	5935	5555	6/10/11	4/2/17	Scaffold	Center for Environmental Biotechnology	SAMN02471959	GCA_000217955.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/955/GCA_000217955.3_PfluHK442.0	21742869	HK44
Streptococcus pyogenes MGAS10394	286636	PRJNA12469	12469	Terrabacteria group	Firmicutes	1.89988	38.7	chromosome:NC_006086.1/CP000003.1	-	1	1947	1792	8/3/04	3/22/17	Complete Genome	Lab of Human Bacterial Pathogenesis	SAMN02603497	GCA_000011665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/665/GCA_000011665.1_ASM1166v1	15272401	MGAS10394
Acinetobacter nosocomialis	106654	PRJNA380857	380857	Proteobacteria	Gammaproteobacteria	4.14236	38.6923	chromosome:NZ_CP020588.1/CP020588.1; plasmid pSSA3_1:NZ_CP020587.1/CP020587.1	-	2	4026	3807	4/10/17	4/13/17	Complete Genome	Yonsei University College of medicine	SAMN06650244	GCA_002082665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/665/GCA_002082665.1_ASM208266v1	-	SSA3
Acinetobacter calcoaceticus	471	PRJNA358196	358196	Proteobacteria	Gammaproteobacteria	4.11599	38.6886	chromosome:NZ_CP020000.1/CP020000.1; plasmid pCA16:NZ_CP020001.1/CP020001.1	-	2	3967	3798	3/21/17	3/23/17	Complete Genome	"Southern Crop Protection and Food Research Centre, Agriculture and Agri-Food Canada"	SAMN06197019	GCA_002055515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/515/GCA_002055515.1_ASM205551v1	-	CA16
Acinetobacter pittii	48296	PRJNA316135	316135	Proteobacteria	Gammaproteobacteria	3.9572	38.6794	chromosome:NZ_CP015145.1/CP015145.1; plasmid pIEC338SC2:NZ_CP015147.1/CP015147.1; plasmid pIEC338SC3:NZ_CP015148.1/CP015148.1; plasmid pIEC338SCOX:NZ_CP015146.1/CP015146.1	-	4	3869	3706	4/8/16	4/10/17	Complete Genome	Universidade de Sao Paulo	SAMN04576523	GCA_001617545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/545/GCA_001617545.1_ASM161754v1	-	IEC338SC
Helicobacter pylori	210	PRJDB3430	277824	Proteobacteria	delta/epsilon subdivisions	1.63533	38.6787	chromosome Unknown:AP014712.1; plasmid ML3-PL:AP014713.1	-	2	-	-	3/7/15	6/4/15	Complete Genome	National Health Research Institutes	SAMD00024433	GCA_001549875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/875/GCA_001549875.1_ASM154987v1	-	ML3
Bacillus methanolicus MGA3	796606	PRJNA246479	246479	Terrabacteria group	Firmicutes	3.42521	38.6304	chromosome:NZ_CP007739.1/CP007739.1; plasmid pBM19:NZ_CP007741.1/CP007741.1; plasmid pBM69:NZ_CP007740.1/CP007740.1	-	3	3454	3179	7/9/14	4/9/17	Complete Genome	Bielefeld University	SAMN02899989	GCA_000724485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/485/GCA_000724485.1_ASM72448v1	25758049	MGA3
Pseudomonas fluorescens NZ007	690597	PRJNA41635	41635	Proteobacteria	Gammaproteobacteria	6.54229	59.8	-	AKBR01	141	5956	5562	7/23/12	5/19/17	Scaffold	The Sainsbury Laboratory	SAMN02471734	GCA_000280805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/805/GCA_000280805.1_ASM28080v1	-	NZ007
Helicobacter pylori XZ274	1127122	PRJNA79003	79003	Proteobacteria	delta/epsilon subdivisions	1.65654	38.6067	chromosome:CP003419.1; plasmid pXZ274:CP003420.1	-	2	1682	1438	5/14/12	1/31/14	Complete Genome	Third Military Medical University	SAMN02603962	GCA_000262655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/655/GCA_000262655.1_ASM26265v1	-	XZ274
Pediococcus damnosus	51663	PRJNA290141	290141	Terrabacteria group	Firmicutes	2.50947	38.6043	chromosome:NZ_CP012288.1/CP012288.1; plasmid pL21535-1:NZ_CP012289.1/CP012289.1; plasmid pL21535-2:NZ_CP012290.1/CP012290.1; plasmid pL21535-3:NZ_CP012291.1/CP012291.1; plasmid pL21535-4:NZ_CP012292.1/CP012292.1; plasmid unnamed:NZ_CP012293.1/CP012293.1	-	6	2391	2221	4/5/16	4/5/17	Complete Genome	Technische Universitaet Muenchen	SAMN03876484	GCA_001611135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/135/GCA_001611135.1_ASM161113v1	27028007	TMW 2.1535
Staphylococcus epidermidis VCU065	904324	PRJNA53731	53731	Terrabacteria group	Firmicutes	2.5465	32	-	AHKZ01	87	2552	2430	2/1/12	3/23/17	Contig	J. Craig Venter Institute	SAMN00117455	GCA_000245675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/675/GCA_000245675.2_ASM24567v2	-	VCU065
[Eubacterium] hallii	39488	PRJEB22345	401412	Terrabacteria group	Firmicutes	3.51567	38.6	chromosome I:LT907978.1	-	1	3336	3093	9/19/17	9/19/17	Complete Genome	WAGENINGEN UNIVERSITY	SAMEA104233736	GCA_900209925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/209/925/GCA_900209925.1_EH1	-	-
[Eubacterium] hallii	39488	PRJEB65610	400737	Terrabacteria group	Firmicutes	3.51567	38.6	chromosome I:LT907848.1	-	1	3336	3093	9/10/17	9/10/17	Complete Genome	NCCSI	SAMEA104226259	GCA_900205895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/205/895/GCA_900205895.1_EH1	-	-
Xanthomonas campestris pv. campestris str. CN19	1358020	PRJEB4856	359554	Proteobacteria	Gammaproteobacteria	4.95808	65.1	-	CBVC01	3	4432	4101	12/31/16	4/6/17	Scaffold	Genoscope CEA	SAMEA3158497	GCA_900039345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/345/GCA_900039345.1_20120324	-	CN19
Clostridium perfringens	1502	PRJNA327319	327319	Terrabacteria group	Firmicutes	3.57963	28	-	MARF01	85	3298	3151	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323881	GCA_001949235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/235/GCA_001949235.1_ASM194923v1	28062388	JFP728
Mycobacterium avium subsp. paratuberculosis Pt154	1029819	PRJNA66649	66649	Terrabacteria group	Actinobacteria	4.50007	68.9	-	AFPG01	1077	4713	3835	6/13/11	5/19/17	Contig	The Commonwealth Scientific and Industrial Research Organisation (CSIRO)	SAMN00222097	GCA_000218115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/115/GCA_000218115.2_ASM21811v2	-	Pt154
Mycobacterium bovis 04-303	1384084	PRJNA214551	214551	Terrabacteria group	Actinobacteria	4.31308	65.5	-	AVSW01	169	4277	4023	10/30/13	4/2/17	Contig	South American Mycobacterium bovis WGS	SAMN02316561	GCA_000488915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/915/GCA_000488915.1_MB04303v1	24285661	04-303
Prochlorococcus marinus str. PAC1	59924	PRJNA246696	246696	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.84116	35.1	-	JNAX01	20	2049	1972	9/29/14	4/2/17	Contig	MIT	SAMN02769564	GCA_000760235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/235/GCA_000760235.1_ASM76023v1	25977791	PAC1
Haemophilus influenzae	727	PRJNA240637	240637	Proteobacteria	Gammaproteobacteria	1.80321	38.1	-	JFZM01	16	1818	1657	4/22/14	3/24/17	Contig	University of British Columbia	SAMN02678122	GCA_000636075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/075/GCA_000636075.1_NTHi1104v1	-	1104
Veillonella parvula	29466	PRJEB6403	251923	Terrabacteria group	Firmicutes	2.13214	38.6	chromosome 1:NZ_LT906445.1/LT906445.1	-	1	1908	1827	8/15/17	8/28/17	Complete Genome	SC	SAMEA4063028	GCA_900186885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/885/GCA_900186885.1_48903_D01	-	NCTC11810
Streptococcus pyogenes	1314	PRJNA377855	377855	Terrabacteria group	Firmicutes	1.84635	38.6	chromosome:NZ_CP020027.1/CP020027.1	-	1	1887	1755	8/1/17	8/21/17	Complete Genome	university of rennes1	SAMN06473357	GCA_002238295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/295/GCA_002238295.1_ASM223829v1	-	STAB090229
Streptococcus pyogenes	1314	PRJNA378587	378587	Terrabacteria group	Firmicutes	1.89035	38.6	chromosome:NZ_CP020082.1/CP020082.1	-	1	1964	1812	8/1/17	8/21/17	Complete Genome	university of rennes1	SAMN06554460	GCA_002238315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/315/GCA_002238315.1_ASM223831v1	-	STAB120304
Streptococcus pyogenes	1314	PRJNA312571	312571	Terrabacteria group	Firmicutes	1.89047	38.6	chromosome:NZ_CP014542.1/CP014542.1	-	1	1966	1827	6/2/17	6/5/17	Complete Genome	university of rennes1	SAMN04500791	GCA_002163545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/545/GCA_002163545.1_ASM216354v1	-	STAB14018
Colwellia sp. PAMC 21821	1816219	PRJNA315485	315485	Proteobacteria	Gammaproteobacteria	4.8843	38.6	chromosome:NZ_CP014943.1/CP014943.1	-	1	4104	3937	4/3/17	4/5/17	Complete Genome	Korea Polar Research Institute	SAMN04562547	GCA_002077175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/175/GCA_002077175.1_ASM207717v1	-	PAMC 21821
Acinetobacter junii	40215	PRJNA359984	359984	Proteobacteria	Gammaproteobacteria	3.37831	38.6	chromosome:NZ_CP019041.1/CP019041.1	-	1	3225	2967	1/10/17	4/6/17	Complete Genome	NEB	SAMN06198736	GCA_001941805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/805/GCA_001941805.1_ASM194180v1	-	65
Leptospira interrogans serovar Pyrogenes str. 2006006960	1049927	PRJNA74039	74039	Spirochaetes	Spirochaetia	4.8755	35	-	AHME02	71	4394	3931	1/24/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436505	GCA_000243515.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/515/GCA_000243515.3_gls454019v2.0	-	2006006960
Buchnera aphidicola (Cinara strobi)	1921549	PRJEB15507	354853	Proteobacteria	Gammaproteobacteria	0.448999	24.0378	chromosome 1:LT669949.1; plasmid pLeu:LT669950.1; plasmid pTrp:LT669951.1	-	3	-	-	12/2/16	12/2/16	Chromosome	Centre de Biologie pour la Gestion des Populations (CBGP - UMR1062)	SAMEA4560776	GCA_900128825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/825/GCA_900128825.1_BCistrobi_v1.0	-	BCistrobi
Xylella fastidiosa	2371	PRJNA257008	257008	Proteobacteria	Gammaproteobacteria	2.53996	51.9302	plasmid pXF-P1.COF0407:NZ_CM003743.1/CM003743.1; plasmid pXF-P4.COF0407:NZ_CM003744.1/CM003744.1; plasmid pXF-PS.COF0407:NZ_CM003745.1/CM003745.1; plasmid pXF-RC.COF0407:NZ_CM003746.1/CM003746.1	LRVH01	183	2450	2132	2/5/16	4/4/17	Contig	µFORGE	SAMN03862123	GCA_001549735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/735/GCA_001549735.1_XFAS004-SEQ-2-ASM-1	-	OLS0479
Pseudomonas putida B001	1048261	PRJEA68177	68177	Proteobacteria	Gammaproteobacteria	5.74094	62.2	-	CAED01	262	5449	4906	8/19/11	5/19/17	Contig	Chonnam National University	SAMEA2272788	GCA_000285395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/395/GCA_000285395.1_ASM28539v1	22072649	B001
Streptococcus anginosus	1328	PRJNA270893	270893	Terrabacteria group	Firmicutes	2.00135	38.6	chromosome:CP012719.1	-	1	1912	1912	8/2/16	8/2/16	Complete Genome	University of Oklahoma Health Sciences Center	SAMN03271571	GCA_001697145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/145/GCA_001697145.1_ASM169714v1	-	J4206
Shigella flexneri 2850-71	766158	PRJNA49097	49097	Proteobacteria	Gammaproteobacteria	4.78728	51	-	AKMV01	52	5239	4311	6/14/12	8/8/17	Contig	Institute for Genome Sciences	SAMN00017001	GCA_000268085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/085/GCA_000268085.1_ASM26808v1	-	2850-71
Agrobacterium tumefaciens	358	PRJNA319063	319063	Proteobacteria	Alphaproteobacteria	5.71746	59.2	-	LXKS01	45	5590	5347	7/22/16	4/5/17	Scaffold	Oregon State University	SAMN04901298	GCA_001692245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/245/GCA_001692245.1_ASM169224v1	27547538	B140/95
Fusobacterium nucleatum	851	PRJNA272113	272113	Fusobacteria	Fusobacteriia	2.39235	26.7	-	LRPY01	199	2355	2151	2/2/16	4/4/17	Scaffold	The Genome Institute at Washington University	SAMN03851012	GCA_001546435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/435/GCA_001546435.1_ASM154643v1	-	MJR7757B
Bifidobacterium longum subsp. longum 35B	1161904	PRJNA89649	89649	Terrabacteria group	Actinobacteria	2.51443	60.1	-	AJTI01	131	2289	2017	5/4/12	3/30/17	Contig	JCVI	SAMN00829158	GCA_000261225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/225/GCA_000261225.1_Blongum35Bv1.0	23682142	35B
Streptococcus pyogenes	1314	PRJNA167314	167314	Terrabacteria group	Firmicutes	1.78687	38.6	chromosome:NZ_CP013838.1/CP013838.1	-	1	1796	1662	5/2/16	3/28/17	Complete Genome	The Methodist Hospital Research Institute	SAMN03792044	GCA_001635895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/895/GCA_001635895.1_ASM163589v1	27247229	MGAS11027
Streptococcus pyogenes	1314	PRJNA305806	305806	Terrabacteria group	Firmicutes	1.86055	38.6	chromosome:NZ_CP013672.1/CP013672.1	-	1	1937	1806	4/18/16	3/28/17	Complete Genome	University of Notre Dame	SAMN04334485	GCA_001620285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/285/GCA_001620285.1_ASM162028v1	27044623	AP53
Solibacillus silvestris	76853	PRJNA296936	296936	Terrabacteria group	Firmicutes	3.99123	38.6	chromosome:NZ_CP014609.1/CP014609.1	-	1	3974	3779	3/10/16	4/12/17	Complete Genome	Charles River 	SAMN04111444	GCA_001586195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/195/GCA_001586195.1_ASM158619v1	-	DSM 12223
Streptococcus pyogenes	1314	PRJNA243328	243328	Terrabacteria group	Firmicutes	1.7914	38.6	chromosome:NZ_CP010450.1/CP010450.1	-	1	1829	1702	8/17/15	3/26/17	Complete Genome	Public Health Ontario	SAMN03274510	GCA_001267845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/845/GCA_001267845.1_ASM126784v1	-	NGAS638
Pseudomonas syringae BRIP39023	1205752	PRJNA169522	169522	Proteobacteria	Gammaproteobacteria	5.9382	59.2	-	AMZX01	34	5347	5114	1/4/13	5/19/17	Scaffold	CSIRO	SAMN02469654	GCA_000333995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/995/GCA_000333995.1_BRIP39023v2.0	23661484	BRIP39023
Vibrio vulnificus	672	PRJNA264982	264982	Proteobacteria	Gammaproteobacteria	4.93725	46.7	-	JSVD01	136	4615	4050	12/2/14	4/17/17	Contig	Northwestern University	SAMN03160381	GCA_000788325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/325/GCA_000788325.1_ASM78832v1	25593245	99-578 DP-B1
Bacillus licheniformis LMG 17339	1131733	PRJNA80831	80831	Terrabacteria group	Firmicutes	4.13866	46.1	-	AZSY01	53	4220	4099	1/8/16	4/5/17	Contig	University of Ghent	SAMN04388494	GCA_001507775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/775/GCA_001507775.1_LI17339	26786044	LMG 17339
Streptococcus pyogenes	1314	PRJNA243328	243328	Terrabacteria group	Firmicutes	1.70205	38.6	chromosome:NZ_CP007562.1/CP007562.1	-	1	1700	1572	6/3/15	3/26/17	Complete Genome	Public Health Ontario	SAMN02715759	GCA_001019695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/695/GCA_001019695.1_ASM101969v1	-	NGAS327
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.66084	50.7	-	CXGP01	387	5246	4463	7/16/15	2/24/17	Contig	SC	SAMEA1324291	GCA_001250055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/055/GCA_001250055.1_7655_8_12	-	H112700291
Bacteroides fragilis str. 1007-1-F #8	1339293	PRJNA206136	206136	FCB group	Bacteroidetes/Chlorobi group	5.49269	43.2	-	JGCM01	315	5070	4648	3/20/14	4/18/17	Contig	IGS	SAMN02314432	GCA_000598265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/265/GCA_000598265.1_ASM59826v1	-	1007-1-F #8
Streptococcus thermophilus	1308	PRJNA291967	291967	Terrabacteria group	Firmicutes	1.86802	39.2	-	LHSK01	10	1987	1705	8/11/15	4/4/17	Scaffold	Northeast Agricultural University	SAMN03957073	GCA_001266475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/475/GCA_001266475.1_ASM126647v1	-	KLDS3.1012
Lactobacillus reuteri	1598	PRJNA342243	342243	Terrabacteria group	Firmicutes	2.65513	38.5	-	MIMF01	392	2645	2371	5/11/17	5/22/17	Contig	Seoul National University	SAMN05751480	GCA_002128515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/515/GCA_002128515.1_ASM212851v1	-	KLR1002
Burkholderia cenocepacia	95486	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	7.59814	67	-	JUPN01	583	7316	6761	7/10/15	3/26/17	Contig	University of Washington	SAMN03198087	GCA_001059305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/305/GCA_001059305.1_ASM105930v1	26230489	881_BCEN
Streptococcus pyogenes JRS4	1150773	PRJNA283215	283215	Terrabacteria group	Firmicutes	1.81197	38.6	chromosome:NZ_CP011414.1/CP011414.1	-	1	1851	1715	5/28/15	3/26/17	Complete Genome	Washington University School of Medicine	SAMN03610013	GCA_001014285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/014/285/GCA_001014285.1_ASM101428v1	26139722	JRS4
Streptococcus pyogenes	1314	PRJNA283214	283214	Terrabacteria group	Firmicutes	1.81197	38.6	chromosome:NZ_CP011415.1/CP011415.1	-	1	1851	1715	5/28/15	3/26/17	Complete Genome	Washington University School of Medicine	SAMN03610015	GCA_001014305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/014/305/GCA_001014305.1_ASM101430v1	26139722	D471
Bacillus pumilus	1408	PRJNA281235	281235	Terrabacteria group	Firmicutes	3.79569	41.3	-	LBDK01	63	3899	3802	6/1/15	4/3/17	Contig	Universidad de Granada	SAMN03486505	GCA_001017485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/485/GCA_001017485.1_BpV2.0	26404596	15.1
Corynebacterium glutamicum	1718	PRJNA274871	274871	Terrabacteria group	Actinobacteria	3.21199	54	-	JYEG01	50	3108	2901	2/26/15	4/3/17	Contig	Jiangnan University	SAMN03333183	GCA_000934815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/815/GCA_000934815.1_ASM93481v1	-	SYPS-062-33a
Streptococcus pyogenes JRS4	1150773	PRJDB114	280499	Terrabacteria group	Firmicutes	1.81112	38.6	chromosome Unknown:NZ_AP012335.1/AP012335.1	-	1	1851	1710	4/4/15	3/27/17	Complete Genome	Tokyo Medical and Dental University	SAMD00061011	GCA_001547715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/715/GCA_001547715.1_ASM154771v1	-	JRS4
Ralstonia solanacearum	305	PRJEB7432	268818	Proteobacteria	Betaproteobacteria	5.60202	66.5	-	CDLS01	1	5177	4603	1/5/15	4/3/17	Scaffold	CIRAD	SAMEA3137590	GCA_000825885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/885/GCA_000825885.2_CFBP6783	-	CFBP6783
Candidatus Pelagibacter ubique	198252	PRJEB9287	287342	Proteobacteria	Alphaproteobacteria	0.834822	27.8	-	CVSM01	150	-	-	6/17/15	6/17/15	Contig	UNIVERSITY OF CALIFORNIA - SAN DIEGO	SAMEA3368564	GCA_001180065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/065/GCA_001180065.1_CLC_assembled_contigs	-	SCGC AAA795-L23
Streptococcus pyogenes	1314	PRJNA238516	238516	Terrabacteria group	Firmicutes	1.70979	38.6	chromosome:NZ_CP007240.1/CP007240.1	-	1	1715	1584	10/20/14	3/24/17	Complete Genome	University Rennes1	SAMN02644974	GCA_000767505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/505/GCA_000767505.1_ASM76750v1	-	7F7
Clostridioides difficile E15	1215069	PRJEB199	222750	Terrabacteria group	Firmicutes	4.32579	28.2	-	CAMM01	444	4049	3837	10/14/13	3/16/17	Scaffold	LPBA	SAMEA3138880	GCA_000530295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/295/GCA_000530295.1_E15	24482682	E15
Shigella boydii	621	PRJNA288164	288164	Proteobacteria	Gammaproteobacteria	4.32276	50.7	-	LSCA01	467	4975	4063	12/15/16	2/26/17	Contig	"University of Maryland, School of Medicine"	SAMN04001689	GCA_001906115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/115/GCA_001906115.1_ASM190611v1	-	600657
Streptococcus salivarius	1304	PRJNA320256	320256	Terrabacteria group	Firmicutes	2.32001	39.2	-	LXII01	207	2195	2022	12/16/16	4/6/17	Contig	State University of Campinas	SAMN04933466	GCA_001906965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/965/GCA_001906965.1_ASM190696v1	-	37-08 S12
Streptococcus pyogenes	1314	PRJNA248257	248257	Terrabacteria group	Firmicutes	1.84648	38.6	chromosome:NZ_CP008695.1/CP008695.1	-	1	1909	1771	9/22/14	3/24/17	Complete Genome	University of Notre Dame	SAMN02800743	GCA_000756485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/485/GCA_000756485.1_ASM75648v1	25225265	M23ND
Brucella abortus	235	PRJNA400357	400357	Proteobacteria	Alphaproteobacteria	3.43547	57.234	chromosome 1:CP023231.1; chromosome 2:CP023232.1	-	2	3523	3148	9/12/17	9/12/17	Chromosome	IZSM-Portici	SAMN07602350	GCA_002291225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/225/GCA_002291225.1_ASM229122v1	-	15500
Yersinia pseudotuberculosis	633	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.3853	47.5	-	CWJJ01	51	4052	3742	7/8/15	4/3/17	Contig	SC	SAMEA859939	GCA_001244655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/655/GCA_001244655.1_5139_1_7	-	Y716
Lactobacillus delbrueckii subsp. delbrueckii DSM 20074 = JCM 1012	1423823	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.7485	50	-	AZCR01	188	1776	1418	11/6/15	4/4/17	Scaffold	Shanghai Majorbio	SAMN02369483	GCA_001433875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/875/GCA_001433875.1_ASM143387v1	26415554	DSM 20074
Leptospira borgpetersenii	174	PRJNA257146	257146	Spirochaetes	Spirochaetia	3.90525	40.1	-	JQRW01	229	3759	3459	2/24/16	4/4/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947889	GCA_001568485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/485/GCA_001568485.1_ASM156848v1	26833181	56214
Streptococcus pyogenes	1314	PRJEB1935	287595	Terrabacteria group	Firmicutes	1.72625	38.6	chromosome:NZ_HG316453.1/HG316453.2	-	1	1721	1582	5/13/14	3/26/17	Complete Genome	ICL-CFB	SAMEA3865279	GCA_001039695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/695/GCA_001039695.2_emm89-1	26173696	H293
Campylobacter fetus subsp. testudinum	1507806	PRJNA285164	285164	Proteobacteria	delta/epsilon subdivisions	1.74222	33.1	-	LFLO01	115	1753	1667	8/5/16	4/5/17	Contig	Utrecht University	SAMN03741800	GCA_001699305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/305/GCA_001699305.1_ASM169930v1	27333878	12S02855-1
Xanthomonas oryzae X11-5A	1009853	PRJNA66097	66097	Proteobacteria	Gammaproteobacteria	4.58976	64.1	-	AFHK01	529	4290	3565	5/9/11	6/15/17	Contig	Colorado State University	SAMN02469650	GCA_000212755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/212/755/GCA_000212755.2_ASM21275v2	21515727	X11-5A
Oenococcus oeni IOEB_8417	1428416	PRJNA229533	229533	Terrabacteria group	Firmicutes	1.84214	37.8	-	AZKH01	65	1878	1697	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02902411	GCA_000761665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/665/GCA_000761665.1_Oeoe_IOEB_8417_1.0	24901216	IOEB_8417
Streptococcus mitis	28037	PRJNA242555	242555	Terrabacteria group	Firmicutes	2.12786	40	-	JPFZ01	15	2119	1913	7/7/14	4/10/17	Contig	Aarhus University	SAMN02836941	GCA_000722775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/775/GCA_000722775.1_ASM72277v1	25053789	SK608
Aeromonas salmonicida subsp. salmonicida	29491	PRJNA264317	264317	Proteobacteria	Gammaproteobacteria	5.16704	58.1	-	MIIM01	233	5012	4373	12/13/16	4/6/17	Contig	Universite Laval	SAMN05728463	GCA_001901975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/975/GCA_001901975.1_ASM190197v1	-	01-B522
Vibrio parahaemolyticus 3256	1238197	PRJNA176631	176631	Proteobacteria	Gammaproteobacteria	5.0901	45.3	-	AZGS01	65	4912	4677	1/13/14	3/18/17	Scaffold	IGS	SAMN02597366	GCA_000519405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/405/GCA_000519405.2_vp3256	-	3256
Helicobacter pylori SouthAfrica20	1352356	PRJNA209860	209860	Proteobacteria	delta/epsilon subdivisions	1.6229	38.6	chromosome:NC_022130.1/CP006691.1	-	1	1579	1343	8/21/13	4/10/17	Complete Genome	Vanderbilt University School of Medicine	SAMN02604293	GCA_000590775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/775/GCA_000590775.1_ASM59077v1	24072860	SouthAfrica20
Coxiella burnetii	777	PRJEB5845	249030	Proteobacteria	Gammaproteobacteria	2.16822	42.4	-	CCAK01	268	2510	2027	3/25/14	4/2/17	Contig	ANIMAL HEALTH AND VETERINARY LABORATORIES AGENCY	SAMEA3139022	GCA_000723265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/265/GCA_000723265.1_Cb-O184	-	Cb_O184
Lactobacillus casei 5b	1378069	PRJNA213287	213287	Terrabacteria group	Firmicutes	3.01993	46.3	-	AUYM01	91	3120	2919	10/17/13	4/2/17	Contig	Instituto de Productos Lacteos de Asturias (IPLA-CSIC)	SAMN02470054	GCA_000474615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/615/GCA_000474615.1_Lcasei5b_2.0	24435875	5b
Salinispora arenicola CNR425	1298919	PRJNA190868	190868	Terrabacteria group	Actinobacteria	5.70588	69.6	-	AXVS01	70	5147	4853	10/25/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02440759	GCA_000482565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/565/GCA_000482565.1_ASM48256v1	-	CNR425
Vibrio harveyi	669	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.95485	44.8	-	LRIF01	2	5583	5289	1/22/16	4/4/17	Contig	US Food and Drug Administration 	SAMN03996255	GCA_001525585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/585/GCA_001525585.1_ASM152558v1	-	ATCC 35084
Bifidobacterium adolescentis	1680	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.54188	58.6	-	DCZM01	180	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457481	GCA_002331865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/865/GCA_002331865.1_ASM233186v1	28894102	-
Lactobacillus fermentum	1613	PRJNA343164	343164	Terrabacteria group	Firmicutes	1.91526	52.2	-	MKGE01	74	1957	1725	2/1/17	4/6/17	Scaffold	ETH Zurich	SAMN05717758	GCA_001982185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/185/GCA_001982185.1_ASM198218v1	-	RI-508
Proteus mirabilis BB2000	1266738	PRJNA183065	183065	Proteobacteria	Gammaproteobacteria	3.84675	38.6	chromosome:NC_022000.1/CP004022.1	-	1	3509	3340	8/6/13	4/10/17	Complete Genome	Harvard University	SAMN02603303	GCA_000444425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/425/GCA_000444425.1_ASM44442v1	"2,388,201,424,009,110"	BB2000
Porphyromonas gingivalis	837	PRJEB10280	362716	FCB group	Bacteroidetes/Chlorobi group	2.25248	48.4	-	FUGF01	68	1995	1804	2/8/17	6/21/17	Scaffold	"Melbourne Dental School, University of Melbourne"	SAMEA3505346	GCA_900157245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/245/GCA_900157245.1_15-9	-	15_9
Aliivibrio fischeri	668	PRJNA318805	318805	Proteobacteria	Gammaproteobacteria	4.09014	38.3	-	MCGK01	118	3756	3609	9/16/16	4/5/17	Scaffold	Massachusetts Institute of Technology	SAMN05449650	GCA_001730145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/145/GCA_001730145.1_ASM173014v1	-	ZF25
Burkholderia thailandensis	57975	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.70808	67.6	-	LNPC01	4	6452	5900	2/9/16	4/5/17	Contig	Northern Arizona University	SAMN03449258	GCA_001555555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/555/GCA_001555555.1_ASM155555v1	-	Malaysia_#20
Clostridium botulinum V891	929508	PRJNA60413	60413	Terrabacteria group	Firmicutes	3.17246	27.8926	plasmid p1CbV891:NZ_CM003321.1/CM003321.1; plasmid p4CbV891:NZ_CM003322.1/CM003322.1; plasmid p5CbV891:NZ_CM003323.1/CM003323.1	AESC02	114	3068	2925	4/14/11	3/26/17	Scaffold	"National Veterinary Institute (SVA), Sweden"	SAMN02470655	GCA_000204375.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/375/GCA_000204375.3_V891_0.2	21486474	V891
Burkholderia multivorans	87883	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.38504	67.4	-	LPJZ01	56	6010	5763	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449605	GCA_001531955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/955/GCA_001531955.1_ASM153195v1	-	MSMB576WGS
Borrelia burgdorferi IPT24	1408861	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.22698	28.4	-	AYBK01	298	1223	645	12/3/13	4/2/17	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378828	GCA_000501955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/955/GCA_000501955.1_BorBurgIPT24	-	IPT24
Treponema pallidum subsp. pallidum	161	PRJNA322283	322283	Spirochaetes	Spirochaetia	1.13918	52.8	chromosome:NZ_CP016052.1/CP016052.1	-	1	1065	1002	8/25/16	4/10/17	Chromosome	"National Institute of Health, Portugal"	SAMN05150357	GCA_001712995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/995/GCA_001712995.1_ASM171299v1	-	PT_SIF1020
Rhizobium leguminosarum	384	PRJNA247563	247563	Proteobacteria	Alphaproteobacteria	7.25884	60.8	-	JUHU01	45	7093	6760	12/9/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02787157	GCA_000799985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/985/GCA_000799985.1_ASM79998v1	-	OV152
Clavibacter michiganensis subsp. sepedonicus	31964	PRJNA379079	379079	Terrabacteria group	Actinobacteria	3.41166	72.4	-	MZMN01	6	3265	3026	3/24/17	8/6/17	Contig	Canadian Food Inspection Agency	SAMN06579198	GCA_002240585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/585/GCA_002240585.1_ASM224058v1	-	CFIA-CsR14
Brucella suis F7/06-1	1169239	PRJNA173530	173530	Proteobacteria	Alphaproteobacteria	3.34119	57.2	-	AQLD01	3	3399	3167	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN00839727	GCA_000371225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/225/GCA_000371225.1_Bruc_suis_F7_06-1_V1	-	F7/06-1
Enterococcus faecalis TX0043	749500	PRJNA47155	47155	Terrabacteria group	Firmicutes	2.81205	37.5	-	AEBL01	35	2867	2761	8/31/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189107	GCA_000147515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/515/GCA_000147515.1_ASM14751v1	-	TX0043
Microcystis aeruginosa NIES-298	449468	PRJNA91065	91065	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.70388	43.2	-	AJUU01	1894	-	-	6/15/17	6/15/17	Contig	Hanyang University	SAMN07248036	GCA_002196445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/445/GCA_002196445.1_MaNIES298-1.0	22814493	NIES-298
Helicobacter pylori UM066	1321940	PRJNA196986	196986	Proteobacteria	delta/epsilon subdivisions	1.65805	38.6	chromosome:NC_021218.3/CP005493.3	-	1	1614	1471	5/14/13	3/24/17	Complete Genome	University of Malaya	SAMN02230271	GCA_000392535.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/535/GCA_000392535.3_ASM39253v3	-	UM066
Borrelia garinii IPT98	1408835	PRJNA223339	223339	Spirochaetes	Spirochaetia	0.933117	28.8	-	AYAK01	677	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378802	GCA_000501075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/075/GCA_000501075.1_BorGarIPT98	-	IPT98
Streptococcus mutans TCI-163	1074135	PRJNA72019	72019	Terrabacteria group	Firmicutes	1.89788	36.8	-	AGKX01	92	1920	1818	10/6/11	3/22/17	Contig	JCVI	SAMN02436449	GCA_000229125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/125/GCA_000229125.2_SMUT5-NEX_4-163	-	TCI-163
Neisseria gonorrhoeae DGI2	528348	PRJNA34705	34705	Proteobacteria	Betaproteobacteria	2.17577	52.3	-	ACIG01	38	2416	2131	4/2/09	4/11/17	Scaffold	Broad Institute	SAMN02595308	GCA_000159935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/935/GCA_000159935.1_ASM15993v1	-	DGI2
Enterococcus faecium	1352	PRJNA292791	292791	Terrabacteria group	Firmicutes	3.24271	37.6016	chromosome:NZ_CP012440.1/CP012440.1; plasmid ISMMS_VRE3_p1:NZ_CP012441.1/CP012441.1; plasmid ISMMS_VRE3_p2:NZ_CP012442.1/CP012442.1; plasmid ISMMS_VRE3_p3:NZ_CP012443.1/CP012443.1; plasmid ISMMS_VRE3_p4:NZ_CP012444.1/CP012444.1; plasmid ISMMS_VRE3_p5:NZ_CP012445.1/CP012445.1; plasmid ISMMS_VRE3_p6:NZ_CP012446.1/CP012446.1	-	7	3372	3126	9/7/16	4/17/17	Chromosome	Mount Sinai School of Medicine	SAMN03988555	GCA_001720985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/985/GCA_001720985.1_ASM172098v1	28301471	ISMMS_VRE_3
Chlamydia psittaci 09DC77	1112268	PRJNA77109	77109	PVC group	Chlamydiae	1.21409	39.3	-	ATKZ01	56	1089	1000	6/25/13	4/1/17	Scaffold	University of Maryland School of Medicine	SAMN00860216	GCA_000415725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/725/GCA_000415725.1_ASM41572v1	-	09DC77
Bifidobacterium animalis subsp. lactis CECT 8145	1415606	PRJEB4870	239559	Terrabacteria group	Actinobacteria	1.95989	60.4	-	CBWX01	77	1647	1569	2/26/14	4/2/17	Scaffold	BIOPOLIS	SAMEA3138972	GCA_000612705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/705/GCA_000612705.1_CECT8145	-	CECT 8145
Bacillus amyloliquefaciens EGD-AQ14	1390372	PRJNA215964	215964	Terrabacteria group	Firmicutes	4.22259	45.7	-	AVQH01	59	4226	4058	9/11/13	4/1/17	Contig	National Environmental Engineering Research Institute-CSIR	SAMN02469682	GCA_000465655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/655/GCA_000465655.1_GS_De_Novo_Assembly	-	EGD-AQ14
Stenotrophomonas maltophilia MTCC 434	1449982	PRJNA235261	235261	Proteobacteria	Gammaproteobacteria	4.88156	66.2	-	JALV01	306	4592	4367	2/26/14	3/24/17	Contig	CSIR-Institute of Microbial Technology	SAMN02952972	GCA_000597745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/745/GCA_000597745.1_XMT-16JAN14	27014232	MTCC 434
Bacillus mycoides	1405	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.63514	35.2	-	NIZC01	65	5978	5572	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07205606	GCA_002200135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/135/GCA_002200135.1_ASM220013v1	-	MOD1_Bc221
Yersinia frederiksenii	29484	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.81598	46.7	-	NHOJ01	61	4526	4357	6/9/17	6/12/17	Scaffold	FDA/CFSAN	SAMN06330408	GCA_002188925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/925/GCA_002188925.1_ASM218892v1	-	CFSAN060535
Alteromonas macleodii	28108	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.37479	44.1	-	DFWA01	332	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451475	GCA_002380205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/205/GCA_002380205.1_ASM238020v1	28894102	-
Bifidobacterium bifidum	1681	PRJNA379831	379831	Terrabacteria group	Actinobacteria	2.25554	62.6	-	NAQK01	21	1952	1777	3/31/17	4/6/17	Contig	University of Parma	SAMN06621707	GCA_002076105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/105/GCA_002076105.1_Bbif1887B	-	1887B
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.09388	41.4	-	CWAM01	77	2042	1864	6/24/15	3/26/17	Contig	SC	SAMEA1032764	GCA_001175285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/285/GCA_001175285.1_6903_3_39	-	EQUI0088
[Haemophilus] parasuis	738	PRJNA301181	301181	Proteobacteria	Gammaproteobacteria	2.24792	39.9	-	MNAQ01	167	2252	2045	1/6/17	4/6/17	Scaffold	Chinese Academy of Agricultural Sciences	SAMN04230880	GCA_001938215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/215/GCA_001938215.1_ASM193821v1	-	H35
Pasteurella multocida 2000	1298925	PRJNA191136	191136	Proteobacteria	Gammaproteobacteria	2.21053	40.3	-	ARNW01	261	2131	1947	6/18/13	4/1/17	Contig	Moredun Research Institute	SAMN02470558	GCA_000412035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/035/GCA_000412035.1_ASM41203v1	-	2000
Lactobacillus rhamnosus LR231	1408205	PRJNA222567	222567	Terrabacteria group	Firmicutes	2.59226	47.1	-	AZHJ01	183	2616	2365	12/16/13	4/2/17	Contig	Saurashtra University	SAMN02469586	GCA_000508405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/405/GCA_000508405.1_Lac_rha231	24578273	LR231
Psychromonas sp. CNPT3	314282	PRJNA13583	13583	Proteobacteria	Gammaproteobacteria	3.05241	38.6	chromosome:NC_020802.1/CP004404.1	-	1	2766	2564	3/22/13	4/17/17	Complete Genome	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN00622974	GCA_000153405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/405/GCA_000153405.2_ASM15340v2	-	CNPT3
Streptococcus pyogenes Alab49	487215	PRJNA73399	73399	Terrabacteria group	Firmicutes	1.82731	38.6	chromosome:NC_017596.1/CP003068.1	-	1	1888	1753	10/7/11	3/22/17	Complete Genome	Institute for Genome Sciences	SAMN02603353	GCA_000230295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/295/GCA_000230295.1_ASM23029v1	21949075	Alab49
Bordetella bronchiseptica MBORD675	1331227	PRJNA202139	202139	Proteobacteria	Betaproteobacteria	5.17302	68.3	-	JGXO01	41	4894	4759	5/12/14	4/2/17	Contig	JCVI	SAMN02231435	GCA_000689815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/815/GCA_000689815.1_gbb31v01	25908122	MBORD675
Sinorhizobium meliloti Mlalz-1	1041154	PRJNA165343	165343	Proteobacteria	Alphaproteobacteria	6.66412	62.2	-	ATZD01	99	6628	6053	7/15/13	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02440882	GCA_000428025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/025/GCA_000428025.1_ASM42802v1	-	Mlalz-1
Corynebacterium diphtheriae	1717	PRJNA339927	339927	Terrabacteria group	Actinobacteria	2.45201	53.5	-	MDYU01	81	2358	2041	9/12/16	4/21/17	Contig	"CMC, Vellore"	SAMN05615426	GCA_001723445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/445/GCA_001723445.1_ASM172344v1	-	TH1526
[Haemophilus] ducreyi	730	PRJNA270894	270894	Proteobacteria	Gammaproteobacteria	1.62555	38.1	chromosome:CP011228.1	-	1	1566	1407	6/30/15	7/23/15	Chromosome	Indiana University School of Medicine	SAMN03271827	GCA_001043435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/435/GCA_001043435.1_ASM104343v1	-	GU6
Legionella pneumophila subsp. pneumophila str. Hextuple_2q	1081094	PRJNA72895	72895	Proteobacteria	Gammaproteobacteria	2.68263	38.6	chromosome:CP003023.1	-	1	-	-	9/9/11	8/31/17	Complete Genome	"HHMI/Dept Microbiology, Tufts University School of Medicine"	SAMN02603308	GCA_000277025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/025/GCA_000277025.1_ASM27702v1	-	Lp02 substr. Hextuple_2q
Yersinia enterocolitica NFO	947557	PRJEA61955	61955	Proteobacteria	Gammaproteobacteria	4.66311	47.1	-	CACY01	97	4426	4088	3/14/11	5/19/17	Contig	Max von Pettenkofer-Institute	SAMEA2272185	GCA_000284995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/995/GCA_000284995.1_ASM28499v1	-	NFO
Dehalococcoides mccartyi	61435	PRJNA256899	256899	Terrabacteria group	Chloroflexi	1.42874	47.1	-	JPRE01	5	1535	1467	8/18/14	4/2/17	Scaffold	NUS	SAMN02943815	GCA_000741845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/845/GCA_000741845.1_ASM74184v1	25278523	SG1
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.1989	41.6	-	JJOS01	146	3640	3422	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708981	GCA_000979345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/345/GCA_000979345.1_gtlEnvA5udCFS	25756680	2.F.A.2.4
Anaplasma phagocytophilum str. ApNP	1359153	PRJNA212452	212452	Proteobacteria	Alphaproteobacteria	1.52158	41.7	-	LANW01	1	1827	1790	3/27/15	3/27/15	Contig	IGS	SAMN02585090	GCA_000964785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/785/GCA_000964785.1_ASM96478v1	-	ApNP
Leuconostoc mesenteroides subsp. cremoris	33965	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.61642	38	-	MPAU01	109	1734	1401	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981472	GCA_002092245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/245/GCA_002092245.1_ASM209224v1	28217118	LMGCF10
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.30713	38.8	-	FPMS01	193	1169	1037	5/10/17	5/24/17	Scaffold	WTSI	SAMEA1094348	GCA_900118555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/555/GCA_900118555.1_7067_6_59	-	03DC37
Serratia marcescens MC6001	1333584	PRJNA203058	203058	Proteobacteria	Gammaproteobacteria	5.36762	59.1	-	ATOH01	131	5201	4980	7/3/13	3/24/17	Scaffold	The Genome Institute	SAMN02436893	GCA_000418835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/835/GCA_000418835.1_S_marcescensMC6001-1.0	-	MC6001
Legionella pneumophila subsp. pneumophila str. Hextuple_3a	1081095	PRJNA72897	72897	Proteobacteria	Gammaproteobacteria	2.68263	38.6	chromosome:CP003024.1	-	1	-	-	9/9/11	8/31/17	Complete Genome	"HHMI/Dept Microbiology, Tufts University School of Medicine"	SAMN02603309	GCA_000277065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/065/GCA_000277065.1_ASM27706v1	-	Lp02 substr. hextuple 3a
Mannheimia haemolytica	75985	PRJNA181191	181191	Proteobacteria	Gammaproteobacteria	2.55859	41	-	LFXV01	101	2629	2478	3/23/16	4/5/17	Contig	Agriculture and Agri-Food Canada	SAMN03840490	GCA_001596575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/575/GCA_001596575.1_ASM159657v1	26926339	T14
Lactobacillus brevis	1580	PRJNA407015	407015	Terrabacteria group	Firmicutes	2.80216	45.5	-	NVYO01	6	2849	2699	9/20/17	9/22/17	Contig	World Institute of Kimchi	SAMN07637920	GCA_002318935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/935/GCA_002318935.1_ASM231893v1	-	D7
Campylobacter coli HN-CCD07046	1318632	PRJNA196812	196812	Proteobacteria	delta/epsilon subdivisions	1.67579	31.5	-	AWRX01	17	1738	1642	6/23/17	6/28/17	Scaffold	"State Key Laboratory for Infectious Disease Prevention and Control, and National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China"	SAMN07269616	GCA_002207945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/945/GCA_002207945.1_ASM220794v1	-	HN-CCD07046
Burkholderia sp. WP42	1416772	PRJNA247584	247584	Proteobacteria	Betaproteobacteria	6.76386	67	-	JQJT01	45	6198	5881	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02787145	GCA_000745665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/665/GCA_000745665.1_ASM74566v1	-	WP42
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.94932	67.2	-	LOWM01	88	6336	6026	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449234	GCA_001525645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/645/GCA_001525645.1_ASM152564v1	-	FL-2-4-30-S1-D0
Propionibacterium acnes HL053PA2	765067	PRJNA49165	49165	Terrabacteria group	Actinobacteria	2.49809	60.1	-	ADZB01	17	2522	2383	7/29/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189226	GCA_000144165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/165/GCA_000144165.1_ASM14416v1	-	HL053PA2
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.51124	32.7	-	CUDS01	80	2476	2367	3/31/15	3/26/17	Contig	SC	SAMEA1035100	GCA_001227225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/225/GCA_001227225.1_7067_4_58	-	51-34
Mycoplasma bovis	28903	PRJNA306895	306895	Terrabacteria group	Tenericutes	0.959003	29.3	-	LQFU01	75	825	743	1/4/17	4/6/17	Contig	"University of California, Davis"	SAMN04366568	GCA_001931315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/315/GCA_001931315.1_ASM193131v1	-	3308MB
Proteus mirabilis	584	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.92369	38.7	-	JVXV01	157	3593	3463	7/10/15	4/3/17	Contig	University of Washington	SAMN03197195	GCA_001062385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/385/GCA_001062385.1_ASM106238v1	26230489	1230_SSON
Veillonella parvula DSM 2008	479436	PRJNA21091	21091	Terrabacteria group	Firmicutes	2.13214	38.6	chromosome:NC_013520.1/CP001820.1	-	1	1904	1824	11/19/09	3/30/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002609	GCA_000024945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/945/GCA_000024945.1_ASM2494v1	21304678	DSM 2008
Cronobacter sakazakii	28141	PRJNA251874	251874	Proteobacteria	Gammaproteobacteria	4.66553	56.7	-	JOLZ01	94	4544	4291	10/9/15	4/4/17	Scaffold	"Nottingham Trent University, UK"	SAMN02840982	GCA_001309385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/385/GCA_001309385.1_ASM130938v1	26438044	708
Klebsiella oxytoca	571	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.95262	55	-	JVAZ01	580	5873	5399	7/10/15	2/21/17	Contig	University of Washington	SAMN03197789	GCA_001063775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/775/GCA_001063775.1_ASM106377v1	26230489	588_KOXY
Lactobacillus salivarius	1624	PRJNA321782	321782	Terrabacteria group	Firmicutes	2.1547	32.7	-	LXZJ01	126	2184	1989	9/12/17	9/14/17	Contig	Seoul National University	SAMN05003801	GCA_002289725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/725/GCA_002289725.1_ASM228972v1	-	KLF005
Moraxella catarrhalis	480	PRJNA297370	297370	Proteobacteria	Gammaproteobacteria	1.89666	41.7	-	LXHG01	189	1861	1609	6/3/16	4/5/17	Contig	Drexel University College of Medicine	SAMN04122860	GCA_001656275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/275/GCA_001656275.1_ASM165627v1	26912404	MX1
Streptococcus pyogenes NZ131	471876	PRJNA20707	20707	Terrabacteria group	Firmicutes	1.81578	38.6	chromosome:NC_011375.1/CP000829.1	-	1	1852	1658	10/16/08	3/22/17	Complete Genome	University of Oklahoma Health Sciences Center	SAMN02604236	GCA_000018125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/125/GCA_000018125.1_ASM1812v1	18820018	NZ131; ATCC BAA-1633
Bifidobacterium breve	1685	PRJDB4597	325619	Terrabacteria group	Actinobacteria	2.24948	58.7	-	BCXM01	27	2003	1809	6/10/16	4/5/17	Contig	Yakult Central Institute	SAMD00047597	GCA_001685725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/725/GCA_001685725.1_ASM168572v1	27340092	BR-07
Bacillus weihenstephanensis	86662	PRJNA246580	246580	Terrabacteria group	Firmicutes	5.90241	35.2	-	JNLY01	128	5775	5362	7/22/14	7/22/14	Contig	University of Bialystok	SAMN02834838	GCA_000732525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/525/GCA_000732525.1_ASM73252v1	-	JAS 83/3
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.2191	36.7	-	LPRU01	12	2331	2193	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305155	GCA_001560305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/305/GCA_001560305.1_GG12_C01_22	-	GG12-C01-22
Streptococcus sanguinis	1305	PRJNA280671	280671	Terrabacteria group	Firmicutes	2.42926	43.1	-	LAWG01	20	2437	2333	3/11/16	4/5/17	Contig	University of Malaya	SAMN03480643	GCA_001588895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/895/GCA_001588895.1_ASM158889v1	-	FSS9
Staphylococcus saprophyticus	29385	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.58685	33	-	LMYP01	51	2548	2380	9/28/16	4/5/17	Scaffold	Tufts University	SAMN04244231	GCA_001747245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/245/GCA_001747245.1_ASM174724v1	-	JB027
Vibrio sp. S512-13	1620394	PRJNA275537	275537	Proteobacteria	Gammaproteobacteria	5.20702	45.3	-	JYOR01	203	5009	4721	3/23/15	4/10/17	Contig	Health Canada	SAMN03349600	GCA_000960425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/425/GCA_000960425.1_ASM96042v1	-	S512-13
Paenibacillus polymyxa A18	1414587	PRJNA225496	225496	Terrabacteria group	Firmicutes	5.71425	45.3	-	JWJJ01	28	5062	4805	12/26/14	4/5/17	Scaffold	International Centre for Genetic Engineering and Biotechnology	SAMN03167808	GCA_000809185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/185/GCA_000809185.2_ASM80918v2	-	A18
Pseudomonas stutzeri	316	PRJNA312382	312382	Proteobacteria	Gammaproteobacteria	4.59133	64.2	-	LSVE01	85	4253	4167	2/26/16	4/5/17	Contig	University of Houston	SAMN04497594	GCA_001575085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/085/GCA_001575085.1_ASM157508v1	-	ODKF13
Aeromonas hydrophila	644	PRJNA237917	237917	Proteobacteria	Gammaproteobacteria	4.78711	61.3	-	JDWC01	134	4508	4212	6/16/14	4/2/17	Contig	USFDA	SAMN02597477	GCA_000708065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/065/GCA_000708065.1_A_hydrophila_NF2	-	NF2
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.41644	67.5	-	LOVJ01	92	6753	6430	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449199	GCA_001523345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/345/GCA_001523345.1_ASM152334v1	-	MSMB1193
Flavobacterium psychrophilum	96345	PRJNA335406	335406	FCB group	Bacteroidetes/Chlorobi group	2.78524	32.4	-	MTCC01	25	2530	2439	5/19/17	5/24/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05504870	GCA_002150255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/255/GCA_002150255.1_ASM215025v1	-	FPG10
Lactobacillus johnsonii	33959	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.51687	34.1	-	DBZS01	160	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06450956	GCA_002311225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/225/GCA_002311225.1_ASM231122v1	28894102	-
Escherichia albertii	208962	PRJDB3047	301492	Proteobacteria	Gammaproteobacteria	4.73968	49.6	-	BBVW01	73	4814	4480	11/6/15	2/25/17	Scaffold	University of Miyazaki	SAMD00026634	GCA_001514925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/925/GCA_001514925.1_ASM151492v1	26537224	EC05-160
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.75646	47.6	-	MECG01	78	3484	3302	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320420	GCA_001883075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/075/GCA_001883075.1_ASM188307v1	-	07/3642-5K-b
Streptococcus equinus	1335	PRJEB17202	351407	Terrabacteria group	Firmicutes	1.8782	37.6	-	FOLK01	14	1830	1767	10/31/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216408	GCA_900112385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/385/GCA_900112385.1_IMG-taxon_2654588137_annotated_assembly	-	Sb13
Pectobacterium carotovorum subsp. brasiliense	180957	PRJNA297630	297630	Proteobacteria	Gammaproteobacteria	4.82218	52.1	-	LKKQ01	83	4333	4163	11/2/15	4/4/17	Contig	University of Pretoria	SAMN04127569	GCA_001429565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/565/GCA_001429565.1_ASM142956v1	26744374	PcbHPI01
Mycobacterium kansasii	1768	PRJNA374853	374853	Terrabacteria group	Actinobacteria	6.52757	65.9	-	MWKX01	51	6043	5652	4/11/17	4/11/17	Scaffold	University of Lodz	SAMN06339041	GCA_002086925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/925/GCA_002086925.1_ASM208692v1	-	3MK
Lactobacillus crispatus	47770	PRJNA290636	290636	Terrabacteria group	Firmicutes	2.07405	36.8	-	LJCZ01	267	2125	1960	2/2/16	4/4/17	Scaffold	Vaginal Microbiome Consortium	SAMN03893599	GCA_001546015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/015/GCA_001546015.1_ASM154601v1	-	VMC1
Aggregatibacter actinomycetemcomitans serotype f str. D18P1	907490	PRJNA53935	53935	Proteobacteria	Gammaproteobacteria	2.26611	44.1	-	AEJO02	114	2249	2035	9/29/11	4/4/17	Scaffold	University of Southern California School of Dentistry	SAMN02471944	GCA_000226795.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/795/GCA_000226795.3_AaD18P-1v2.0	23194436	D18P1
Gardnerella vaginalis 41V	907262	PRJNA53893	53893	Terrabacteria group	Actinobacteria	1.65937	41.3	-	AEJE01	76	1445	1267	10/25/10	3/30/17	Contig	Virginia Commonwealth University	SAMN02472074	GCA_000165635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/165/635/GCA_000165635.2_ASM16563v2	-	41V
Lactobacillus paracasei subsp. paracasei Lpp229	1256197	PRJNA178424	178424	Terrabacteria group	Firmicutes	2.95436	46.3	-	ANJT01	317	3187	2711	6/11/13	4/1/17	Contig	Danone Research	SAMN02469727	GCA_000410215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/215/GCA_000410215.1_ASM41021v1	23894338	Lpp229
Staphylococcus hominis	1290	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.2228	31.4	-	JVLC01	68	2161	2101	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197526	GCA_001070895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/895/GCA_001070895.1_ASM107089v1	26230489	336_SHAE
Staphylococcus capitis	29388	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.53678	32.8	-	JVOP01	120	2441	2343	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197435	GCA_001064095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/095/GCA_001064095.1_ASM106409v1	26230489	245_SAUR
Rhodococcus hoagii	43767	PRJNA316970	316970	Terrabacteria group	Actinobacteria	5.04106	68.8	-	LWHW01	39	4693	4558	4/18/17	6/6/17	Contig	The University of Edinburgh	SAMN04632054	GCA_002095115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/115/GCA_002095115.1_ASM209511v1	27638249	PAM1413
Klebsiella variicola	244366	PRJEB7831	268465	Proteobacteria	Gammaproteobacteria	5.43006	57.5	-	CXOZ01	19	5414	5179	7/24/15	2/21/17	Contig	INSTITUTO NACIONAL DE SALUD	SAMEA3487664	GCA_001261875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/875/GCA_001261875.1_Kv06-268	-	-
Acinetobacter nosocomialis	106654	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.96487	38.7	-	NDFD01	117	3852	3624	5/31/17	6/2/17	Contig	JCVI	SAMN06461822	GCA_002161975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/975/GCA_002161975.1_ASM216197v1	-	ABUH381
Streptococcus oralis subsp. tigurinus 2426	1333865	PRJNA202968	202968	Terrabacteria group	Firmicutes	1.88288	40.8861	plasmid pST2426:NZ_ASXA01000016.1/ASXA01000016.1	ASXA01	25	1930	1791	7/31/13	4/6/17	Contig	"Geneva University Hospitals, Genomic Research Laboratory"	SAMN02469815	GCA_000442175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/175/GCA_000442175.1_2426.1	24478475	2426
Achromobacter xylosoxidans	85698	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	6.74367	67.6	-	NBTL01	1	6206	5981	4/10/17	4/13/17	Contig	US Food and Drug Administration 	SAMN04875581	GCA_002083165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/165/GCA_002083165.1_ASM208316v1	-	FDAARGOS_255
Pseudomonas syringae pv. maculicola	59511	PRJNA286821	286821	Proteobacteria	Gammaproteobacteria	5.91434	58.8	-	LGLD01	64	5447	5072	9/18/15	4/4/17	Scaffold	University of Toronto	SAMN03837766	GCA_001293575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/575/GCA_001293575.1_PmaYM7930	-	YM7930
Pseudomonas savastanoi pv. fraxini	360922	PRJNA388451	388451	Proteobacteria	Gammaproteobacteria	5.89054	58.2	-	NIAW01	222	5555	5054	8/25/17	8/28/17	Scaffold	savastovar	SAMN07177411	GCA_002269785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/785/GCA_002269785.1_ASM226978v1	-	NCPPB 1006
Pseudoalteromonas sp. S2292	579607	PRJNA242743	242743	Proteobacteria	Gammaproteobacteria	4.73366	38.9	-	JXYD01	281	4129	3943	4/1/15	4/17/17	Contig	Technical University of Denmark	SAMN03323956	GCA_000967705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/705/GCA_000967705.1_S2292	25879706	S2292
Vibrio alginolyticus	663	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.17783	44.7	-	LOSN01	2	4797	4562	12/21/15	4/4/17	Contig	US Food and Drug Administration 	SAMN03996338	GCA_001471275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/275/GCA_001471275.1_ASM147127v1	-	ATCC 17749
Streptococcus pyogenes str. Manfredo	160491	PRJNA270	270	Terrabacteria group	Firmicutes	1.84127	38.6	chromosome:NC_009332.1/AM295007.1	-	1	1912	1774	2/5/07	5/28/17	Complete Genome	Sanger Institute	SAMEA1705956	GCA_000009385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/385/GCA_000009385.1_ASM938v1	17012393	Manfredo
Enterobacter asburiae	61645	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.48222	55.2	-	LJEY02	240	5586	5206	10/15/15	4/5/17	Contig	University of KwaZulu Natal	SAMN04011459	GCA_001317235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/235/GCA_001317235.2_ASM131723v2	-	ST435:939705067
Brucella sp. CMUL 027	1905699	PRJNA344963	344963	Proteobacteria	Alphaproteobacteria	3.29068	57.2	-	MKQA01	36	3362	3130	1/6/17	4/16/17	Contig	LAU	SAMN05853708	GCA_001937875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/875/GCA_001937875.1_ASM193787v1	-	CMUL 027
Pseudomonas amygdali pv. morsprunorum	129138	PRJNA287460	287460	Proteobacteria	Gammaproteobacteria	6.28223	58.1	-	LIIB01	173	6077	5553	1/25/16	4/4/17	Contig	University of Edinburgh	SAMN03992203	GCA_001535735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/735/GCA_001535735.1_ASM153573v1	27145446	2341
Xanthomonas euvesicatoria	456327	PRJNA275496	275496	Proteobacteria	Gammaproteobacteria	5.31203	64.6	-	JZLX01	116	4789	4365	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03349330	GCA_001008885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/885/GCA_001008885.1_v1	26089818	586
Acinetobacter pittii	48296	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.03769	38.8	-	LLFK01	79	4021	3753	10/27/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145676	GCA_001414725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/725/GCA_001414725.1_ASM141472v1	-	ABBL065
Riemerella anatipestifer	34085	PRJNA309353	309353	FCB group	Bacteroidetes/Chlorobi group	2.2167	35.2	-	LUDI01	22	2090	1989	6/20/16	4/5/17	Contig	Sichuan Agricultural University	SAMN04431887	GCA_001671145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/671/145/GCA_001671145.1_RCAD0121	-	RCAD0121
Pantoea ananatis	553	PRJEB17890	353797	Proteobacteria	Gammaproteobacteria	4.85463	53.5	-	FPJM01	16	4586	4415	11/17/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03097714	GCA_900119405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/405/GCA_900119405.1_IMG-taxon_2599185299_annotated_assembly	-	NFR11
Leptospira santarosai	28183	PRJNA257150	257150	Spirochaetes	Spirochaetia	4.05694	41.8	-	JQRK01	311	4075	3719	2/24/16	4/5/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947901	GCA_001569295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/295/GCA_001569295.1_ASM156929v1	26833181	56215
Citrobacter freundii	546	PRJNA252011	252011	Proteobacteria	Gammaproteobacteria	5.19699	51.6	-	JRTI01	98	5194	4847	10/26/15	4/4/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872791	GCA_001413235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/235/GCA_001413235.1_ASM141323v1	25501822	RU2 BHI15
Fusobacterium necrophorum subsp. funduliforme	143387	PRJNA315619	315619	Fusobacteria	Fusobacteriia	2.17384	35.1	-	LVFE01	47	2152	2040	3/25/16	4/5/17	Contig	Aarhus University	SAMN04570273	GCA_001597565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/565/GCA_001597565.1_ASM159756v1	-	F1365
Streptococcus parasanguinis	1318	PRJNA304333	304333	Terrabacteria group	Firmicutes	2.28706	41.8	-	LQNY01	116	2075	2048	3/2/16	3/24/16	Scaffold	University of Kaiserslautern	SAMN04325031	GCA_001578955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/955/GCA_001578955.1_ASM157895v1	-	DD19
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.8587	55.2	-	JUIA01	72	4772	4531	12/16/14	3/25/17	Contig	JCVI	SAMN03012831	GCA_000802785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/785/GCA_000802785.1_SPADES_assembly_of_Enterobacter_cloacae_ND19	-	ND19
Vibrio anguillarum	55601	PRJNA267183	267183	Proteobacteria	Gammaproteobacteria	4.16753	44.5875	chromosome I:CP010044.1; chromosome II:CP010045.1	-	2	3635	3499	2/7/17	2/7/17	Chromosome	University of Copenhagen	SAMN03178218	GCA_001989935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/935/GCA_001989935.1_ASM198993v1	-	87-9-116
Kingella kingae KK107	1305790	PRJEB1645	194482	Proteobacteria	Betaproteobacteria	1.99128	46.8	-	CBSN01	1	2006	1793	9/11/13	4/2/17	Scaffold	URMITE	SAMEA2272676	GCA_000470415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/415/GCA_000470415.1_KK107	-	KK107
Streptococcus pseudopneumoniae	257758	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.11858	39.3	-	JVHE01	132	2041	1948	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197628	GCA_001072925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/925/GCA_001072925.1_ASM107292v1	26230489	434_SPSE
Xanthomonas perforans	442694	PRJNA276683	276683	Proteobacteria	Gammaproteobacteria	5.22531	64.7	-	JZVY01	81	4741	4386	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03379912	GCA_001009925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/925/GCA_001009925.1_ASM100992v1	26089818	GEV1054
Klebsiella aerogenes	548	PRJNA272572	272572	Proteobacteria	Gammaproteobacteria	4.47433	54.2	-	JXTQ01	69	4257	3884	2/20/15	4/6/17	Contig	Hasselt University	SAMN03283901	GCA_000878365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/365/GCA_000878365.1_ASM87836v1	25883299	DDE1
Aeromonas veronii	654	PRJNA356925	356925	Proteobacteria	Gammaproteobacteria	4.91915	58.1	-	MRUI01	21	4581	4317	12/26/16	4/6/17	Contig	Agricultural University of Athens	SAMN06130232	GCA_001921885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/921/885/GCA_001921885.1_ASM192188v1	-	pamvotica
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98883	64.1	-	FSBI01	18	4944	4805	12/14/16	3/21/17	Contig	SC	SAMEA2071373	GCA_900132145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/145/GCA_900132145.1_10665_4_58	-	313
Mycobacterium africanum MAL020176	1354188	PRJNA211702	211702	Terrabacteria group	Actinobacteria	4.38526	65.6	-	JKYP01	2	4230	4021	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02231169	GCA_000667365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/365/GCA_000667365.1_Myco_afri_MAL020176_V1	-	MAL020176
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.73552	66.5	-	LOUA01	121	8110	7667	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449162	GCA_001522695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/695/GCA_001522695.1_ASM152269v1	-	INT3-BP99
Streptococcus sobrinus TCI-363	1074078	PRJNA71923	71923	Terrabacteria group	Firmicutes	2.13064	43.4	-	AGHA01	356	2181	1890	10/6/11	3/30/17	Contig	JCVI	SAMN02436537	GCA_000228285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/285/GCA_000228285.2_SMUT2-NEX_7-363	-	TCI-363
Morganella morganii	582	PRJEB18384	355781	Proteobacteria	Gammaproteobacteria	3.91641	50.9	-	FRBZ01	18	3712	3579	12/2/16	4/6/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216301	GCA_900142745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/745/GCA_900142745.1_IMG-taxon_2654588210_annotated_assembly	-	NLAE-zl-C84
Streptococcus pyogenes SSI-1	193567	PRJNA301	301	Terrabacteria group	Firmicutes	1.89427	38.6	chromosome:NC_004606.1/BA000034.2	-	1	1974	1846	3/4/03	3/22/17	Complete Genome	Osaka Univ.	SAMD00061102	GCA_000011285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/285/GCA_000011285.1_ASM1128v1	12799345	SSI-1
Mycobacterium chelonae	1774	PRJNA347845	347845	Terrabacteria group	Actinobacteria	5.0997	64	-	MLCI01	21	4990	4860	1/11/17	4/6/17	Contig	University of Georgia	SAMN05897973	GCA_001942555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/555/GCA_001942555.1_ASM194255v1	-	ATCC 19237
Vibrio campbellii	680	PRJNA257165	257165	Proteobacteria	Gammaproteobacteria	5.3125	45.8	-	JPTD01	5273	-	-	7/22/15	7/22/15	Contig	Naval Research Laboratory	SAMN02948012	GCA_001185295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/295/GCA_001185295.1_ASM118529v1	-	501J
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28395	32.4	chromosome:AP017587.1	-	1	-	-	1/24/17	1/27/17	Chromosome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053862	GCA_002356995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/995/GCA_002356995.1_ASM235699v1	-	HH-17
Rhodococcus fascians	1828	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.95142	64.4	-	NPFU01	41	5639	5477	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07414574	GCA_002259325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/325/GCA_002259325.1_ASM225932v1	-	14-2632c-1
Leptospira kirschneri serovar Mozdok str. 'B 81/7 type 3/Tsaratsovo'	1049961	PRJNA74213	74213	Spirochaetes	Spirochaetia	4.24734	35.9	-	AHQJ01	570	3871	3410	2/3/12	5/18/17	Scaffold	J. Craig Venter Institute	SAMN00739378	GCA_000246355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/355/GCA_000246355.2_CLC_glsol065	-	B 81/7 type 3/Tsaratsovo
Salinispora pacifica CNT029	1136418	PRJNA169839	169839	Terrabacteria group	Actinobacteria	5.23675	69.8	-	AZWB01	37	4898	4597	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597232	GCA_000514515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/515/GCA_000514515.1_ASM51451v1	-	CNT029
Elizabethkingia anophelis	1117645	PRJNA272632	272632	FCB group	Bacteroidetes/Chlorobi group	3.59087	35.5	-	LFKT01	12	3322	3237	7/10/15	4/3/17	Contig	The Pennsylvania State University	SAMN03491119	GCA_001051975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/975/GCA_001051975.1_ASM105197v1	26966196	As1
Vibrio cyclitrophicus	47951	PRJNA318805	318805	Proteobacteria	Gammaproteobacteria	6.12483	35	-	MAKE01	310	4569	3500	7/21/16	7/21/16	Scaffold	Massachusetts Institute of Technology	SAMN04867923	GCA_001691245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/245/GCA_001691245.1_ASM169124v1	-	ZF255
Pseudomonas sp. NS1(2017)	2025658	PRJNA397663	397663	Proteobacteria	Gammaproteobacteria	6.70252	60.3	chromosome:NZ_CP022960.1/CP022960.1	-	1	6241	6055	8/24/17	8/27/17	Chromosome	University of Reading	SAMN07484035	GCA_002269425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/425/GCA_002269425.1_ASM226942v1	-	NS1
Streptomyces sp. 2323.1	1938841	PRJEB22324	401128	Terrabacteria group	Actinobacteria	8.21246	71.2	chromosome I:LT907981.1	-	1	7162	6881	9/19/17	9/19/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN06272775	GCA_900221035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/221/035/GCA_900221035.1_IMG-taxon_2738543001_annotated_assembly	-	2323.1
Paeniclostridium sordellii	1505	PRJEB8146	277670	Terrabacteria group	Firmicutes	3.52176	27.3	-	CDNX01	35	3402	3312	3/13/15	4/4/17	Contig	WTSI	SAMEA1572083	GCA_001372795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/795/GCA_001372795.1_SSCC26591	-	SSCC26591
Acinetobacter sp. NIPH 298	1217692	PRJNA183241	183241	Proteobacteria	Gammaproteobacteria	3.48684	40.2	-	APRM01	4	3278	3130	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01087856	GCA_000369505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/505/GCA_000369505.1_Acin_sp_NIPH_298_V1	-	NIPH 298
Klebsiella sp. NFIX42	1566155	PRJEB15773	347727	Proteobacteria	Gammaproteobacteria	5.29231	58.1	-	FMVG01	21	5236	4977	10/17/16	7/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159331	GCA_900101775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/775/GCA_900101775.1_IMG-taxon_2600255280_annotated_assembly	-	NFIX42
Flavobacterium sp. FPG59	1929267	PRJNA356714	356714	FCB group	Bacteroidetes/Chlorobi group	3.59416	33.9	-	MTCA01	418	3243	3032	5/19/17	5/24/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN06121432	GCA_002150205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/205/GCA_002150205.1_ASM215020v1	-	FPG59
Frankia sp. CeD	258230	PRJNA218012	218012	Terrabacteria group	Actinobacteria	5.0046	70.1	-	JPGU01	120	4350	3878	7/21/14	4/17/17	Scaffold	University of New Hampshire	SAMN02344567	GCA_000732115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/115/GCA_000732115.1_CeD	27056238	CeD
Bacillus sp. 105MF	1151120	PRJNA175165	175165	Terrabacteria group	Firmicutes	5.82194	35.3	-	ARGR01	125	6138	5588	4/19/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441689	GCA_000374885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/885/GCA_000374885.1_ASM37488v1	-	105MF
Clostridium sp. HMSC19C11	1581188	PRJNA269817	269817	Terrabacteria group	Firmicutes	4.01564	28.2	-	LWPA01	79	3657	3557	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436192	GCA_001806715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/715/GCA_001806715.1_ASM180671v1	-	HMSC19C11
Sphingomonas sp. Root1294	1736447	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	5.49668	66.6	-	LMEJ01	16	5146	4980	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155716	GCA_001426255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/255/GCA_001426255.1_Root1294	26633631	Root1294
Synechococcus sp. RS9917	221360	PRJNA13555	13555	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.58492	64.4	-	AANP01	1	2693	2584	1/30/06	4/17/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436139	GCA_000153065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/065/GCA_000153065.1_ASM15306v1	-	RS9917; RCC556
Rhodococcus sp. Chr-9	713612	PRJNA268262	268262	Terrabacteria group	Actinobacteria	5.34333	67.7	-	JTIZ01	142	5047	4651	12/15/14	4/17/17	Contig	Peking University	SAMN03217555	GCA_000801125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/125/GCA_000801125.1_ASM80112v1	25635009	Chr-9
Enterobacter sp. MGH 11	1329820	PRJNA201926	201926	Proteobacteria	Gammaproteobacteria	4.99312	54.9	-	JCLN01	8	4900	4623	2/3/14	4/2/17	Scaffold	Broad Institute	SAMN02138551	GCA_000534615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/615/GCA_000534615.1_Ente_cloa_complex_MGH_11_V1	-	MGH 11
Staphylococcus sp. HMSC068D07	1715151	PRJNA296279	296279	Terrabacteria group	Firmicutes	2.22331	31.4	-	LTIZ01	51	2177	2092	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477529	GCA_001809815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/815/GCA_001809815.1_ASM180981v1	-	HMSC068D07
Corynebacterium sp. HMSC11H10	1581090	PRJNA269859	269859	Terrabacteria group	Actinobacteria	2.43328	58.7	-	LTZQ01	20	2130	2030	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03287013	GCA_001807045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/045/GCA_001807045.1_ASM180704v1	-	HMSC11H10
Arthrobacter sp. I3	218158	PRJNA232078	232078	Terrabacteria group	Actinobacteria	4.7477	66.7	-	AZSB01	124	4585	3977	1/14/14	4/17/17	Scaffold	University of Auckland	SAMN02429164	GCA_000520575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/575/GCA_000520575.1_Ai3DRAFT	25649291	I3
Bradyrhizobium sp. STM 3809	551936	PRJEA72433	72433	Proteobacteria	Alphaproteobacteria	7.31175	66.2	-	CAFJ01	803	6897	6413	12/14/11	5/18/17	Contig	CEA IG Genoscope	SAMEA2272567	GCA_000239795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/795/GCA_000239795.2_ASM23979v2	24704842	STM 3809
Streptococcus sp. HMSC068H01	1715078	PRJNA296206	296206	Terrabacteria group	Firmicutes	2.064	35.3	-	LTLH01	108	2109	2027	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04461801	GCA_001808625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/625/GCA_001808625.1_ASM180862v1	-	HMSC068H01
Mycobacterium sp. AB57	1841860	PRJEB19165	368667	Terrabacteria group	Actinobacteria	6.01547	67.2	-	FUFA01	1	5649	5462	2/1/17	4/17/17	Scaffold	URMITE	SAMEA54078418	GCA_900157375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/375/GCA_900157375.1_PRJEB19165	-	AB57
Serratia sp. LCN16	1805627	PRJEB11856	312324	Proteobacteria	Gammaproteobacteria	5.09212	52.8	-	FBSD01	25	4794	4708	2/17/16	8/18/17	Contig	James Hutton Institute	SAMEA3708278	GCA_900007715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/715/GCA_900007715.1_Serratia_sp._strain_LCN16	-	-
Prevotella sp. P5-119	1602171	PRJNA272659	272659	FCB group	Bacteroidetes/Chlorobi group	3.31937	47.5	-	JXQK01	93	2660	2516	2/9/15	4/10/17	Contig	University of Ljubljana	SAMN03284263	GCA_000833975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/975/GCA_000833975.1_ASM83397v1	-	P5-119
Enterococcus sp. HMSC066C04	1739504	PRJNA300154	300154	Terrabacteria group	Firmicutes	4.19267	39.2	-	LTTS01	137	4127	3938	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480421	GCA_001815025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/025/GCA_001815025.1_ASM181502v1	-	HMSC066C04
Novosphingobium sp. 12-64-8	1970404	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	0.66464	64.4	-	NCCP01	22	657	619	8/16/17	8/16/17	Scaffold	None	SAMN06622395	GCA_002279725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/725/GCA_002279725.1_ASM227972v1	-	-
Treponema sp. UBA1793	1947704	PRJNA348753	348753	Spirochaetes	Spirochaetia	3.99997	45.3	-	DCFX01	98	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06454586	GCA_002314445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/445/GCA_002314445.1_ASM231444v1	28894102	-
Citrobacter sp. TSA-1	184912	PRJNA396906	396906	Proteobacteria	Gammaproteobacteria	5.13052	52	-	NSCC01	139	5091	4774	9/11/17	9/13/17	Contig	UC Santa Cruz	SAMN07441838	GCA_002289385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/385/GCA_002289385.1_ASM228938v1	-	TSA-1
Methylobacterium sp. Leaf361	1736352	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	6.84906	70.9	-	LMPY01	98	6527	6221	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151742	GCA_001424445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/445/GCA_001424445.1_Leaf361	26633631	Leaf361
Nocardioides sp. YR527	1881028	PRJEB16035	348494	Terrabacteria group	Actinobacteria	6.19244	69.5	-	FNFN01	22	5869	5737	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428985	GCA_900101045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/045/GCA_900101045.1_IMG-taxon_2684622998_annotated_assembly	-	YR527
Erythrobacter sp. REDSEA-S43_B2	1811539	PRJNA289734	289734	Proteobacteria	Alphaproteobacteria	2.87177	63.6	-	LUNX01	18	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534573	GCA_001626515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/515/GCA_001626515.1_ASM162651v1	27377622	-
Marinobacter sp. tcs-11	1742860	PRJNA270573	270573	Proteobacteria	Gammaproteobacteria	4.26656	57.1	-	LLYU01	51	-	-	3/20/17	3/20/17	Contig	Hong Kong University of Science and Technology	SAMN04195695	GCA_002049515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/515/GCA_002049515.1_ASM204951v1	-	-
Acidovorax sp. 12322-1	1705602	PRJNA302578	302578	Proteobacteria	Betaproteobacteria	3.01844	59.5	-	LPXH01	41	2822	2678	12/28/15	4/11/17	Contig	Huaqiao University	SAMN04272206	GCA_001482805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/805/GCA_001482805.1_ASM148280v1	-	12322-1
Janthinobacterium sp. 551a	1566281	PRJEB16217	348992	Proteobacteria	Betaproteobacteria	6.45918	63.7	-	FMXD01	28	5639	5489	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159349	GCA_900103675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/675/GCA_900103675.1_IMG-taxon_2600255393_annotated_assembly	-	551a
Eubacterium sp. CAG:76	1262892	PRJEB998	206788	Terrabacteria group	Firmicutes	2.5876	36.3	-	CBKG01	64	2303	2278	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138782	GCA_000437955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/955/GCA_000437955.1_MGS76	-	-
Alcanivorax sp. UBA1608	1945970	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.2999	64.3	-	DCNA01	164	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451981	GCA_002321635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/635/GCA_002321635.1_ASM232163v1	28894102	-
Stenotrophomonas sp. UBA1867	1947547	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.80378	69.3	-	DDHV01	15	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451468	GCA_002352995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/995/GCA_002352995.1_ASM235299v1	28894102	-
Paenibacillus sp. Soil750	1736398	PRJNA298127	298127	Terrabacteria group	Firmicutes	8.32231	45	-	LMSD01	44	7130	6904	11/2/15	4/11/17	Scaffold	ETH Zurich	SAMN04155663	GCA_001428045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/045/GCA_001428045.1_Soil750	26633631	Soil750
Ruminococcus sp. CAG:330	1262954	PRJEB835	206894	Terrabacteria group	Firmicutes	2.4746	52.4	-	CBIH01	130	2281	2236	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138743	GCA_000437175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/175/GCA_000437175.1_MGS330	-	-
Thioalkalivibrio sp. ALJ12	1158761	PRJNA181383	181383	Proteobacteria	Gammaproteobacteria	2.77939	66	-	ARKA01	6	2654	2554	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441677	GCA_000378305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/305/GCA_000378305.1_ASM37830v1	-	ALJ12
Bacteroides sp. Marseille-P3166	1917883	PRJEB18269	355717	FCB group	Bacteroidetes/Chlorobi group	3.9771	48.3	-	FQXX01	23	3375	3213	12/2/16	4/16/17	Scaffold	URMITE	SAMEA18121918	GCA_900130135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/135/GCA_900130135.1_PRJEB18269	-	Marseille-P3166
Shigella sp. FC1737	1898040	PRJNA341906	341906	Proteobacteria	Gammaproteobacteria	4.62043	50.7	-	MIIY01	688	5145	4393	9/23/16	9/23/16	Contig	Christian Medical College	SAMN05730136	GCA_001743055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/743/055/GCA_001743055.1_ASM174305v1	-	FC1737
Exiguobacterium sp. UBA3968	1946492	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.94731	46.7	-	DGCW01	14	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454525	GCA_002385115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/115/GCA_002385115.1_ASM238511v1	28894102	-
Prochlorococcus sp. HOT212_60m_824E10	1961097	PRJNA375761	375761	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.17334	31.3	-	MWPE01	414	1311	1122	3/14/17	3/16/17	Scaffold	Massachusetts Institute of Technology	SAMN06345457	GCA_002026185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/185/GCA_002026185.1_ASM202618v1	-	HOT212_60m_824E10
Actinomyces sp. Marseille-P2825	1852361	PRJEB18045	354750	Terrabacteria group	Actinobacteria	2.3001	63.1	-	FQSA01	31	2166	1658	11/25/16	4/17/17	Scaffold	URMITE	SAMEA4555840	GCA_900128465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/465/GCA_900128465.1_PRJEB18045	-	Marseille-P2825
Propionibacterium sp. KPL1849	1203575	PRJNA169464	169464	Terrabacteria group	Actinobacteria	2.47217	60	-	AXMK01	2	2462	2243	10/21/13	4/17/17	Contig	Broad Institute	SAMN02597017	GCA_000477835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/835/GCA_000477835.1_Prop_sp_KPL1849_V1	-	KPL1849
Alistipes sp. UBA928	1946014	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.09753	57.6	-	DBDQ01	143	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06454180	GCA_002293665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/665/GCA_002293665.1_ASM229366v1	28894102	-
Neisseria sp. HMSC072F04	1739348	PRJNA299998	299998	Proteobacteria	Betaproteobacteria	2.41995	51.1	-	LTEO01	128	2342	2146	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477656	GCA_001812225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/225/GCA_001812225.1_ASM181222v1	-	HMSC072F04
Rothia sp. HMSC076D04	1739484	PRJNA300134	300134	Terrabacteria group	Actinobacteria	2.32124	59.4	-	LTUL01	26	1859	1759	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480404	GCA_001814645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/645/GCA_001814645.1_ASM181464v1	-	HMSC076D04
Rhodanobacter sp. SCN 66-43	1660135	PRJNA279279	279279	Proteobacteria	Gammaproteobacteria	3.54036	65.8	-	MEGK01	28	3152	3038	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652514	GCA_001725765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/765/GCA_001725765.1_ASM172576v1	26031303	-
Sphingobium sp. Z007	627495	PRJEB12244	390091	Proteobacteria	Alphaproteobacteria	4.54996	63.6	-	FBVV01	99	4400	4209	6/11/17	6/21/17	Scaffold	UNIVERSITY OF ZUERICH	SAMEA3718969	GCA_900013435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/435/GCA_900013435.1_Sphingobium_sp_Z007_rep_B_with_predator	-	-
Halomonas sp. WRN001	2032625	PRJNA400729	400729	Proteobacteria	Gammaproteobacteria	5.47588	63.8	-	NSKB01	33	5100	4920	9/6/17	9/8/17	Contig	"Institute of Agricultural c and Regional Planning, Chinese Academy of Agricultural Sciences"	SAMN07573017	GCA_002286975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/975/GCA_002286975.1_ASM228697v1	-	WRN001
Rhizobium sp. YR060	1500309	PRJNA247567	247567	Proteobacteria	Alphaproteobacteria	6.5976	60.2	-	JQLB01	30	6315	6123	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02787064	GCA_000746335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/335/GCA_000746335.1_ASM74633v1	-	YR060
Chryseobacterium sp. BLS98	885586	PRJNA287685	287685	FCB group	Bacteroidetes/Chlorobi group	4.4126	37.6	-	LFNF01	8	4040	3936	7/2/15	4/17/17	Contig	GCAT-SEEK	SAMN03785155	GCA_001045445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/445/GCA_001045445.1_ASM104544v1	-	BLS98
Mesorhizobium sp. LNHC229A00	1287240	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.89488	62.4	-	AYWQ01	272	6759	6019	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359664	GCA_000502415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/415/GCA_000502415.1_Mloti_LNHC229A00	-	LNHC229A00
Variovorax sp. OK605	1855317	PRJEB17234	351436	Proteobacteria	Betaproteobacteria	8.71852	68.1	-	FOWL01	42	8059	7787	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216567	GCA_900115445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/445/GCA_900115445.1_IMG-taxon_2609459724_annotated_assembly	-	OK605
Xanthomonas translucens	343	PRJNA302486	302486	Proteobacteria	Gammaproteobacteria	4.8842	68.1	-	LNVN01	117	4199	3847	12/8/15	4/5/17	Scaffold	Kansas State University	SAMN04279077	GCA_001462005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/005/GCA_001462005.1_ASM146200v1	-	LB10
Snodgrassella alvi SCGC AB-598-J21	1385367	PRJNA214773	214773	Proteobacteria	Betaproteobacteria	2.33416	40.9	-	AVQL01	456	2479	2414	7/7/14	7/7/14	Contig	Yale University	SAMN02314518	GCA_000722505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/505/GCA_000722505.1_sag_b_j21_noCtrl	25210772	-
Hyphomonas sp. UBA3601	1946626	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.17125	57.2	-	DFME01	148	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457087	GCA_002375605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/605/GCA_002375605.1_ASM237560v1	28894102	-
Microbacterium sp. 292MF	1151122	PRJNA183360	183360	Terrabacteria group	Actinobacteria	4.07322	70.7	-	AQYD01	7	3775	3698	4/23/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441725	GCA_000380605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/605/GCA_000380605.1_ASM38060v1	-	292MF
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.8438	59	-	LNWZ01	85	4581	4431	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339863	GCA_001681735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/735/GCA_001681735.1_ASM168173v1	-	NBRC102038
Streptomyces rimosus subsp. pseudoverticillatus	1464079	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.51835	71.9	-	LGCV01	436	8364	7813	9/4/15	3/12/17	Contig	University of Illinois	SAMN02900609	GCA_001279345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/345/GCA_001279345.1_ASM127934v1	-	NRRL WC-3896
Curtobacterium sp. UNCCL20	1502773	PRJEB15749	347678	Terrabacteria group	Actinobacteria	3.85388	71.1	-	FNKG01	6	3637	3526	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02800687	GCA_900101675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/675/GCA_900101675.1_IMG-taxon_2595698215_annotated_assembly	-	UNCCL20
Butyrivibrio sp. AE3003	1496721	PRJNA239505	239505	Terrabacteria group	Firmicutes	3.46403	41	-	JMLX01	1	3246	3046	5/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743359	GCA_000686065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/065/GCA_000686065.1_ASM68606v1	-	AE3003
Ensifer sp. YIC4027	1752398	PRJNA321922	321922	Proteobacteria	Alphaproteobacteria	5.97332	62.2	-	LYBW01	66	5588	5308	9/12/16	4/13/17	Scaffold	"Yantai Institute of Coastal Zone Research,Chinese Academy of Sciences"	SAMN05006708	GCA_001723275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/275/GCA_001723275.1_ASM172327v1	-	YIC4027
Sphingopyxis sp. H073	1759079	PRJNA294421	294421	Proteobacteria	Alphaproteobacteria	4.30902	64.8	-	LNSG01	27	4236	4122	12/15/15	4/11/17	Contig	US EPA	SAMN04256160	GCA_001468395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/395/GCA_001468395.1_ASM146839v1	-	H073
Streptococcus pyogenes MGAS315	198466	PRJNA311	311	Terrabacteria group	Firmicutes	1.90052	38.6	chromosome:NC_004070.1/AE014074.1	-	1	1987	1850	7/18/02	3/22/17	Complete Genome	Lab of Human Bacterial Pathogenesis	SAMN02603496	GCA_000007425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/425/GCA_000007425.1_ASM742v1	12122206	MGAS315
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.53231	34.4	-	LZGL01	22	2408	2306	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179586	GCA_001690685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/685/GCA_001690685.1_ASM169068v1	-	wkB112
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.10277	42.2	-	FTQK01	5	984	915	3/18/17	3/24/17	Scaffold	Functional Genomics Genter Zurich	SAMEA4555943	GCA_900149395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/395/GCA_900149395.1_17-23a	-	-
Salinivibrio sp. AR640	1909437	PRJNA368795	368795	Proteobacteria	Gammaproteobacteria	3.25602	49.3	-	MUFD01	60	3027	2869	2/14/17	4/17/17	Scaffold	Universidad de Sevilla	SAMN06272989	GCA_001995405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/405/GCA_001995405.1_ASM199540v1	-	AR640
Klebsiella michiganensis	1134687	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.89469	55.3	-	JUZP01	344	5711	5351	7/10/15	2/21/17	Contig	University of Washington	SAMN03197825	GCA_001057685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/685/GCA_001057685.1_ASM105768v1	26230489	625_KOXY
Achromobacter sp. 2789STDY5608633	1806501	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	7.15023	67.6	-	CYTR01	52	6640	6412	9/19/15	4/11/17	Scaffold	SC	SAMEA2247598	GCA_001298975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/975/GCA_001298975.1_11861_6_25	-	2789STDY5608633
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	7.16453	44	-	MPTQ01	111	6348	6168	1/18/17	4/6/17	Contig	Cornell University	SAMN05772524	GCA_001955765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/765/GCA_001955765.1_ASM195576v1	-	FSL H3-0464
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.60954	50.8	-	MPPZ01	88	2583	2456	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016241	GCA_002020335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/335/GCA_002020335.1_ASM202033v1	-	-
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.81307	32.3	-	FQKO01	15	2816	2641	11/23/16	4/6/17	Contig	SC	SAMEA3449098	GCA_900126725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/725/GCA_900126725.1_17175_3_42	-	3688STDY6125090
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.8125	57.2	-	NFXE01	135	6030	5669	6/9/17	6/12/17	Contig	JCVI	SAMN05960931	GCA_002187215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/215/GCA_002187215.1_ASM218721v1	-	G4582
Enterobacter kobei	208224	PRJNA322832	322832	Proteobacteria	Gammaproteobacteria	4.95472	54.7	-	LYUT01	53	4868	4642	6/2/17	6/5/17	Scaffold	zhejiang University 	SAMN05176179	GCA_002165505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/505/GCA_002165505.1_ASM216550v1	28243445	ECC3047
Proteiniphilum sp. UBA4993	1947265	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.89861	46.4	-	DGYZ01	74	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455638	GCA_002398505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/505/GCA_002398505.1_ASM239850v1	28894102	-
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.74131	66.7	-	LPKD01	63	6199	5917	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449609	GCA_001532185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/185/GCA_001532185.1_ASM153218v1	-	MSMB594WGS
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.53275	67.7	-	LPIH01	98	6863	6514	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449559	GCA_001532315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/315/GCA_001532315.1_ASM153231v1	-	MSMB2168WGS
Syntrophomonas sp. UBA4844	1947619	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.1852	47.7	-	DHES01	121	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452757	GCA_002400005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/005/GCA_002400005.1_ASM240000v1	28894102	-
Oleiphilus sp. HI0133	1822271	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	5.72863	47.6	-	LWGK01	2393	5084	4339	5/2/16	5/2/16	Contig	Massachusetts Institute of Technology	SAMN04580810	GCA_001635835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/835/GCA_001635835.1_ASM163583v1	-	HI0133
Fibrobacter sp. UWB13	1896204	PRJEB20261	381720	FCB group	Fibrobacteres	3.80467	47.9	-	FXAX01	10	3143	3026	4/20/17	5/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05720489	GCA_900177805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/805/GCA_900177805.1_IMG-taxon_2716885052_annotated_assembly	-	UWB13
Xanthomonas axonopodis pv. manihotis str. IBSBF 280	1185684	PRJNA163763	163763	Proteobacteria	Gammaproteobacteria	4.84275	64.8	-	AKDP01	850	4705	3825	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090320	GCA_000266065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/065/GCA_000266065.1_IBSBF280	22699502	IBSBF 280
Xanthomonas axonopodis pv. manihotis str. IBSBF 2816	1185685	PRJNA163765	163765	Proteobacteria	Gammaproteobacteria	4.90262	65.1	-	AKDQ01	145	4364	4044	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090321	GCA_000266085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/085/GCA_000266085.1_IBSBF2816	22699502	IBSBF 2816
Fibrobacter sp. UBA1313	1946526	PRJNA348753	348753	FCB group	Fibrobacteres	2.21529	44.5	-	DBTP01	219	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06451420	GCA_002307115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/115/GCA_002307115.1_ASM230711v1	28894102	-
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.53586	67.7	-	LPII01	102	6866	6520	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449560	GCA_001532345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/345/GCA_001532345.1_ASM153234v1	-	MSMB2169WGS
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.98796	66.5	-	LPJC01	85	6484	6164	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449580	GCA_001532675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/675/GCA_001532675.1_ASM153267v1	-	MSMB2156WGS
Proteiniphilum sp. UBA4977	1947263	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.80767	44.4	-	DGZP01	128	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455399	GCA_002398565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/565/GCA_002398565.1_ASM239856v1	28894102	-
Enterobacter kobei	208224	PRJNA322832	322832	Proteobacteria	Gammaproteobacteria	4.95454	54.7	-	LYUS01	54	4867	4641	6/2/17	6/5/17	Scaffold	zhejiang University 	SAMN05173313	GCA_002165545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/545/GCA_002165545.1_ASM216554v1	28243445	ECC3026
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.8169	57.2	-	NFXB01	142	6026	5653	6/9/17	6/12/17	Contig	JCVI	SAMN05960936	GCA_002187225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/225/GCA_002187225.1_ASM218722v1	-	G4601
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.80901	32.3	-	FQKW01	16	2812	2637	11/23/16	4/6/17	Contig	SC	SAMEA3449101	GCA_900126735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/735/GCA_900126735.1_17175_3_45	-	3688STDY6125093
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.7428	50.7	-	MPPY01	90	2715	2578	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016240	GCA_002020375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/375/GCA_002020375.1_ASM202037v1	-	-
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	6.9507	44	-	MPTS01	105	6128	5964	1/18/17	4/6/17	Contig	Cornell University	SAMN05772522	GCA_001955775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/775/GCA_001955775.1_ASM195577v1	-	FSL H3-0465
Achromobacter sp. 2789STDY5608615	1806492	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	6.87247	68.1	-	CYTY01	103	6393	5971	9/19/15	4/11/17	Scaffold	SC	SAMEA2247580	GCA_001298995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/995/GCA_001298995.1_11861_6_9	-	2789STDY5608615
Klebsiella michiganensis	1134687	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	6.19599	55.7	-	LJFC02	176	6057	5742	10/15/15	2/21/17	Contig	University of KwaZulu Natal	SAMN04011463	GCA_001317245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/245/GCA_001317245.2_ASM131724v2	-	ST170:939742031
Salinivibrio sp. ML290	1909468	PRJNA368706	368706	Proteobacteria	Gammaproteobacteria	3.52366	50.3	-	MUEY01	36	3261	3125	2/14/17	4/17/17	Scaffold	Universidad de Sevilla	SAMN06270276	GCA_001995695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/695/GCA_001995695.1_ASM199569v1	-	ML290
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.08892	42	-	FTQL01	2	973	910	3/18/17	4/10/17	Scaffold	Functional Genomics Genter Zurich	SAMEA4555922	GCA_900149475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/475/GCA_900149475.1_1-25a	-	-
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.36903	35.8	-	LZGK01	16	2189	2112	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179587	GCA_001690705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/705/GCA_001690705.1_ASM169070v1	-	wkB178
Geosporobacter ferrireducens	1424294	PRJNA340190	340190	Terrabacteria group	Firmicutes	5.81722	38.592	chromosome:NZ_CP017269.1/CP017269.1; plasmid unnamed1:NZ_CP017270.1/CP017270.1	-	2	5522	5278	10/3/16	4/13/17	Complete Genome	Chungbuk National University	SAMN05786931	GCA_001750685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/685/GCA_001750685.1_ASM175068v1	-	IRF9
Sphingopyxis sp. H100	1759081	PRJNA294421	294421	Proteobacteria	Alphaproteobacteria	4.30667	64.8	-	LNSI01	52	4245	4109	12/15/15	4/11/17	Contig	US EPA	SAMN04256162	GCA_001468425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/425/GCA_001468425.1_ASM146842v1	-	H100
Ensifer sp. YR511	1855294	PRJEB16160	348918	Proteobacteria	Alphaproteobacteria	8.25832	61.8	-	FNGR01	91	7755	7376	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216328	GCA_900103045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/045/GCA_900103045.1_IMG-taxon_2615840643_annotated_assembly	-	YR511
Butyrivibrio sp. AE2032	1458463	PRJNA237252	237252	Terrabacteria group	Firmicutes	7.346	45.1	-	JNLF01	9	6456	6240	6/11/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02841205	GCA_000702965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/965/GCA_000702965.1_ASM70296v1	-	AE2032
Curtobacterium sp. YR515	1855316	PRJEB17276	351474	Terrabacteria group	Actinobacteria	3.83103	71.6	-	FOOD01	10	3618	3523	10/30/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216329	GCA_900113095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/095/GCA_900113095.1_IMG-taxon_2616644843_annotated_assembly	-	YR515
Streptomyces rimosus subsp. rimosus	132474	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.59278	71.9	-	LGCU01	367	8470	7999	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900608	GCA_001279375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/375/GCA_001279375.1_ASM127937v1	-	NRRL WC-3898
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.6577	58.9	-	LNXA01	64	4425	4290	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339864	GCA_001681755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/755/GCA_001681755.1_ASM168175v1	-	S1358
Microbacterium sp. TS-1	1344956	PRJDB1140	231363	Terrabacteria group	Actinobacteria	3.39616	70.2	-	BASQ01	3	3181	3112	8/30/13	4/24/17	Contig	Toyo University	SAMD00036755	GCA_000509385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/509/385/GCA_000509385.1_ASM50938v1	24356828	TS-1
Hyphomonas sp. UBA3592	1946624	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.52784	58.1	-	DFMN01	30	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453352	GCA_002376305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/305/GCA_002376305.1_ASM237630v1	28894102	-
Snodgrassella alvi SCGC AB-598-P14	1443104	PRJNA233347	233347	Proteobacteria	Betaproteobacteria	1.30775	40.7	-	JACG01	385	1529	1498	7/14/14	7/14/14	Contig	Yale University	SAMN02567697	GCA_000725145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/145/GCA_000725145.1_sag_b_p14_noCtrl	25210772	-
Xanthomonas translucens	343	PRJNA302486	302486	Proteobacteria	Gammaproteobacteria	5.15814	67.9	-	LNVS01	128	4366	3992	12/8/15	4/5/17	Scaffold	Kansas State University	SAMN04279068	GCA_001462045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/045/GCA_001462045.1_ASM146204v1	-	XT130
Variovorax sp. 770b2	1566271	PRJEB17411	351598	Proteobacteria	Betaproteobacteria	7.45378	67	-	FOXJ01	16	6873	6711	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159339	GCA_900115685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/685/GCA_900115685.1_IMG-taxon_2603880186_annotated_assembly	-	770b2
Mesorhizobium sp. LNHC232B00	1287243	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.98878	62.7	-	AYWP01	81	6860	6339	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359665	GCA_000502435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/435/GCA_000502435.1_Mloti_LNHC232B00	-	LNHC232B00
Chryseobacterium sp. FH2	1674291	PRJNA287676	287676	FCB group	Bacteroidetes/Chlorobi group	3.98876	34.2	-	LFNE01	24	3755	3614	7/2/15	4/10/17	Contig	GCAT-SEEK	SAMN03785143	GCA_001045455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/455/GCA_001045455.1_ASM104545v1	-	FH2
Rhizobium sp. YR519	1500259	PRJNA247575	247575	Proteobacteria	Alphaproteobacteria	5.83137	61.8	-	JQLD01	27	5646	5460	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02787134	GCA_000746385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/385/GCA_000746385.1_ASM74638v1	-	YR519
Halomonas sp. JB37	2024405	PRJNA387187	387187	Proteobacteria	Gammaproteobacteria	3.80824	53.9	-	NRGW01	2	3540	3380	9/21/17	9/23/17	Contig	"Dutton Lab, UCSD"	SAMN07141169	GCA_002332255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/255/GCA_002332255.1_ASM233225v1	28644126	JB37
Sphingobium sp. Z007	627495	PRJEB12244	390091	Proteobacteria	Alphaproteobacteria	4.54967	63.6	-	FBVW01	114	4387	4193	6/11/17	6/21/17	Scaffold	UNIVERSITY OF ZUERICH	SAMEA3718968	GCA_900013445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/445/GCA_900013445.1_Sphingobium_sp_Z007_rep_A_with_predator	-	-
Rhodanobacter sp. RIFOXYA1_FULL_67_6	1802011	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	2.91463	66.4	-	MHZQ01	830	2906	1858	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314332	GCA_001830405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/405/GCA_001830405.1_ASM183040v1	27774985	-
Rothia sp. HMSC069C01	1739485	PRJNA300135	300135	Terrabacteria group	Actinobacteria	2.41661	53.8	-	LTUK01	35	2117	1985	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480453	GCA_001814655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/655/GCA_001814655.1_ASM181465v1	-	HMSC069C01
Sphingobacterium sp. UBA2700	1947492	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.11646	41.4	-	DELI01	36	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06454558	GCA_002354335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/335/GCA_002354335.1_ASM235433v1	28894102	-
Neisseria sp. HMSC073B07	1739362	PRJNA300012	300012	Proteobacteria	Betaproteobacteria	2.36307	51.4	-	LTED01	168	2273	2106	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480026	GCA_001812465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/465/GCA_001812465.1_ASM181246v1	-	HMSC073B07
Alistipes sp. UBA1813	1946008	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.15843	62.1	-	DCFD01	29	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453768	GCA_002315055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/055/GCA_002315055.1_ASM231505v1	28894102	-
Propionibacterium sp. KPL1847	1203574	PRJNA169463	169463	Terrabacteria group	Actinobacteria	2.48387	60	-	AXML01	4	2470	2248	10/21/13	4/17/17	Contig	Broad Institute	SAMN02597018	GCA_000477855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/855/GCA_000477855.1_Prop_sp_KPL1847_V1	-	KPL1847
Campylobacter sp. MIT 97-5078	1548153	PRJNA261711	261711	Proteobacteria	delta/epsilon subdivisions	2.45517	34	-	JRMR01	184	2518	2349	10/2/14	4/9/17	Scaffold	Massachusetts Institute of Technology	SAMN03075554	GCA_000762855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/855/GCA_000762855.1_ASM76285v1	-	MIT 97-5078
Actinomyces sp. Marseille-P2818	1852376	PRJEB18271	355708	Terrabacteria group	Actinobacteria	2.00757	57	-	FTLP01	2	1764	1643	1/17/17	4/17/17	Scaffold	URMITE	SAMEA18122668	GCA_900155605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/605/GCA_900155605.1_PRJEB18271	-	Marseille-P2818
Prochlorococcus sp. HOT208_60m_810B23	1961086	PRJNA375759	375759	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.57701	31.1	-	MWOW01	267	1743	1593	3/14/17	3/16/17	Scaffold	Massachusetts Institute of Technology	SAMN06345446	GCA_002026205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/205/GCA_002026205.1_ASM202620v1	-	HOT208_60m_810B23
Exiguobacterium sp. UBA4551	1946494	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.08117	47	-	DGLF01	40	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457831	GCA_002387265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/265/GCA_002387265.1_ASM238726v1	28894102	-
Bacteroides sp. Marseille-P2653	1841855	PRJEB18812	360801	FCB group	Bacteroidetes/Chlorobi group	5.30857	39.8	-	FTLV01	20	4557	4285	1/14/17	4/17/17	Scaffold	URMITE	SAMEA45981418	GCA_900155865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/865/GCA_900155865.1_PRJEB18812	-	Marseille-P2653
Thioalkalivibrio sp. ALJ2	1261622	PRJNA181384	181384	Proteobacteria	Gammaproteobacteria	2.88173	65.8	-	ARKB01	12	2783	2671	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440992	GCA_000378325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/325/GCA_000378325.1_ASM37832v1	-	ALJ2
Ruminococcus sp. CAG:403	1262958	PRJEB869	206779	Terrabacteria group	Firmicutes	2.20835	45.6	-	CBIS01	62	2001	1971	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138747	GCA_000437255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/255/GCA_000437255.1_MGS403	-	-
Paenibacillus sp. Soil766	1736404	PRJNA298127	298127	Terrabacteria group	Firmicutes	8.25778	45.1	-	LMSJ01	60	7066	6757	11/2/15	4/11/17	Scaffold	ETH Zurich	SAMN04155669	GCA_001428105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/105/GCA_001428105.1_Soil766	26633631	Soil766
Alcanivorax sp. UBA1504	1945969	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.99704	63.6	-	DCRA01	351	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456432	GCA_002323635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/635/GCA_002323635.1_ASM232363v1	28894102	-
Brevundimonas sp. UBA4609	1946128	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.06211	66.8	-	DGIZ01	270	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454888	GCA_002386585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/585/GCA_002386585.1_ASM238658v1	28894102	-
Eubacterium sp. CAG:581	1262890	PRJEB944	206831	Terrabacteria group	Firmicutes	1.90042	33.9	-	CBKI01	133	1772	1746	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138783	GCA_000437975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/975/GCA_000437975.1_MGS581	-	-
Janthinobacterium sp. 344	1566280	PRJEB17092	351708	Proteobacteria	Betaproteobacteria	6.44486	63.7	-	FOKL01	27	5628	5478	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159300	GCA_900112025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/025/GCA_900112025.1_IMG-taxon_2602042072_annotated_assembly	-	344
Psychrobacter sp. JCM 18900	1298608	PRJDB884	240165	Proteobacteria	Gammaproteobacteria	3.27264	42.7	-	BAWG01	35	2928	2893	3/5/14	5/2/14	Contig	The University of Tokyo	SAMD00000009	GCA_000586415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/415/GCA_000586415.1_ASM58641v1	24699965	JCM 18900
Acidovorax sp. CCH12-A4	1768795	PRJNA299404	299404	Proteobacteria	Betaproteobacteria	7.99796	63.9	-	LSKS01	674	7629	7105	2/10/16	4/12/17	Contig	Georgia Institute of Technology	SAMN04299497	GCA_001557145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/145/GCA_001557145.1_ASM155714v1	-	CCH12-A4
Marinobacter sp. REDSEA-S27_B10	1811545	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	3.26637	57.2	-	LUOM01	500	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534588	GCA_001626795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/795/GCA_001626795.1_ASM162679v1	27377622	-
Erythrobacter sp. REDSEA-S42_B5	1811538	PRJNA289734	289734	Proteobacteria	Alphaproteobacteria	2.68131	63.7	-	LUNW01	12	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534572	GCA_001626545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/545/GCA_001626545.1_ASM162654v1	27377622	-
Nocardioides sp. JGI 0001009-J09	1298875	PRJNA190853	190853	Terrabacteria group	Actinobacteria	1.11678	52.6	-	AXWB01	171	-	-	10/25/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02440760	GCA_000482665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/665/GCA_000482665.1_ASM48266v1	-	JGI 0001009-J09
Methylobacterium sp. Leaf399	1736364	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.45672	69.7	-	LMQK01	35	4114	3956	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151754	GCA_001424525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/525/GCA_001424525.1_Leaf399	26633631	Leaf399
Citrobacter sp. CtB7.12	1696093	PRJNA291389	291389	Proteobacteria	Gammaproteobacteria	5.01961	53.3	-	LIFT01	53	4866	4613	9/23/15	4/11/17	Scaffold	IBT-UNAM	SAMN03945393	GCA_001297795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/795/GCA_001297795.1_ASM129779v1	26543121	CtB7.12
Treponema sp. UBA1747	1947703	PRJNA348753	348753	Spirochaetes	Spirochaetia	2.64647	39.9	-	DCHR01	61	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452734	GCA_002315375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/375/GCA_002315375.1_ASM231537v1	28894102	-
Novosphingobium sp. 12-62-10	1970402	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	3.28698	62.5	-	NCCU01	28	3034	2962	8/16/17	8/16/17	Scaffold	None	SAMN06622390	GCA_002279815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/815/GCA_002279815.1_ASM227981v1	-	-
Enterococcus sp. HMSC065H03	1739507	PRJNA300157	300157	Terrabacteria group	Firmicutes	2.86234	37.8	-	LTTP01	238	2941	2787	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480424	GCA_001815065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/065/GCA_001815065.1_ASM181506v1	-	HMSC065H03
Prevotella sp. P5-125	1602172	PRJNA272660	272660	FCB group	Bacteroidetes/Chlorobi group	3.12012	47.8	-	JXQL01	88	2451	2304	2/9/15	4/10/17	Contig	University of Ljubljana	SAMN03284264	GCA_000833995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/995/GCA_000833995.1_ASM83399v1	-	P5-125
Mycobacterium sp. AB308	1841859	PRJEB19184	368665	Terrabacteria group	Actinobacteria	6.02958	68.4	-	FTRV01	12	5716	5476	1/27/17	4/17/17	Scaffold	URMITE	SAMEA54120418	GCA_900157385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/385/GCA_900157385.1_PRJEB19184	-	AB308
Streptococcus sp. HMSC063D10	1715081	PRJNA296209	296209	Terrabacteria group	Firmicutes	2.09223	35.4	-	LTLG01	25	2122	2025	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477502	GCA_001808635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/635/GCA_001808635.1_ASM180863v1	-	HMSC063D10
Bradyrhizobium sp. CCBAU 43298	1128178	PRJNA77219	77219	Proteobacteria	Alphaproteobacteria	7.91699	63.9	-	AJQE01	508	7836	7123	5/3/12	5/18/17	Contig	China Agricultural University	SAMN02469467	GCA_000261685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/685/GCA_000261685.1_43298	22586130	CCBAU 43298
Arthrobacter sp. H5	1267973	PRJNA232080	232080	Terrabacteria group	Actinobacteria	4.32547	62.3	-	AZSC01	104	4371	3825	1/14/14	4/9/17	Scaffold	University of Auckland	SAMN02429163	GCA_000520595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/595/GCA_000520595.1_Ah5DRAFT	25649291	H5
Corynebacterium sp. HMSC14B06	1581098	PRJNA269867	269867	Terrabacteria group	Actinobacteria	2.56224	58.6	-	LWON01	55	2198	2105	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03433344	GCA_001807075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/075/GCA_001807075.1_ASM180707v1	-	HMSC14B06
Staphylococcus sp. HMSC062C01	1715152	PRJNA296280	296280	Terrabacteria group	Firmicutes	2.13884	31.3	-	LTIY01	45	2081	2015	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477530	GCA_001809845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/845/GCA_001809845.1_ASM180984v1	-	HMSC062C01
Enterobacter sp. MGH 10	1329819	PRJNA201925	201925	Proteobacteria	Gammaproteobacteria	5.26044	55.3	-	JCLO01	17	5233	4958	2/3/14	4/10/17	Scaffold	Broad Institute	SAMN02138550	GCA_000534635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/635/GCA_000534635.1_Ente_cloa_complex_MGH_10_V2	-	MGH 10
Rhodococcus sp. MEB064	1587522	PRJNA270644	270644	Terrabacteria group	Actinobacteria	4.66425	67	-	JXQS01	81	4373	4239	2/9/15	4/10/17	Contig	University of Chicago	SAMN03267949	GCA_000834565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/565/GCA_000834565.1_ASM83456v1	-	MEB064
Synechococcus sp. WH 7805	59931	PRJNA13553	13553	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.62705	57.6	-	AAOK01	3	2736	2615	2/24/06	4/17/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436160	GCA_000153285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/285/GCA_000153285.1_ASM15328v1	-	WH 7805
Sphingomonas sp. Root50	1736551	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	5.49879	66.6	-	LMFM01	18	5149	4992	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155820	GCA_001426825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/825/GCA_001426825.1_Root50	26633631	Root50
Clostridium sp. HMSC19D02	1581189	PRJNA269818	269818	Terrabacteria group	Firmicutes	4.07019	28.2	-	LWOZ01	85	3751	3623	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436193	GCA_001806725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/725/GCA_001806725.1_ASM180672v1	-	HMSC19D02
Bacillus sp. 95MFCvi2.1	1151121	PRJNA175169	175169	Terrabacteria group	Firmicutes	5.6733	35.3	-	ARGV01	93	5919	5468	4/19/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440448	GCA_000374965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/374/965/GCA_000374965.1_ASM37496v1	-	95MFCvi2.1
Frankia sp. Allo2	981405	PRJNA218011	218011	Terrabacteria group	Actinobacteria	5.35211	70	-	JPHT01	110	4738	4271	7/25/14	4/17/17	Scaffold	University of New Hampshire	SAMN02344566	GCA_000733325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/325/GCA_000733325.1_ASM73332v1	-	Allo2
Flavobacterium sp. AJR	1979369	PRJNA382733	382733	FCB group	Bacteroidetes/Chlorobi group	5.3962	32.5	-	NCWQ01	203	4701	4528	5/23/17	5/25/17	Contig	Lycoming College	SAMN06718011	GCA_002156885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/885/GCA_002156885.1_ASM215688v1	-	AJR
Klebsiella sp. NFIX22	1566167	PRJEB15831	347750	Proteobacteria	Gammaproteobacteria	5.21866	58.2	-	FMVO01	21	5109	4882	10/17/16	7/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159308	GCA_900102285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/285/GCA_900102285.1_IMG-taxon_2600255299_annotated_assembly	-	NFIX22
Acinetobacter sp. CIP 70.18	1217700	PRJNA183240	183240	Proteobacteria	Gammaproteobacteria	4.66318	40.8	-	APRN01	28	4424	4247	4/17/13	5/18/17	Scaffold	Broad Institute	SAMN01087864	GCA_000369525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/525/GCA_000369525.1_Acin_sp_CIP_70_18_V1	-	CIP 70.18
Paeniclostridium sordellii	1505	PRJEB8147	277671	Terrabacteria group	Firmicutes	3.44281	27.3	-	CDNO01	31	3343	3237	3/13/15	4/4/17	Contig	WTSI	SAMEA1572111	GCA_001372815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/815/GCA_001372815.1_SSCC37615	-	SSCC37615
Streptomyces sp. Tu6071	355249	PRJNA63579	63579	Terrabacteria group	Actinobacteria	7.50673	73.0568	chromosome:NZ_CM001165.1/CM001165.1; plasmid pTu6071:NZ_CM001166.1/CM001166.1	AFHJ01	2	6554	6257	5/10/11	5/19/17	Chromosome	"Pharmaceutical Bioinformatic, University of Freiburg"	SAMN02470040	GCA_000213055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/055/GCA_000213055.1_ASM21305v1	21705604	Tu6071
Pseudomonas sp. LAB-08	143813	PRJDB4583	330823	Proteobacteria	Gammaproteobacteria	6.73396	59.7	chromosome:AP017423.1	-	1	6158	6063	7/20/16	7/20/16	Chromosome	"Graduate School of Science and Technology, Shizuoka University, Japan"	SAMD00047326	GCA_002356535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/535/GCA_002356535.1_ASM235653v1	-	-
Elizabethkingia anophelis	1117645	PRJNA302576	302576	FCB group	Bacteroidetes/Chlorobi group	4.02331	35.6	-	LPXG01	83	3690	3564	12/28/15	4/5/17	Contig	Huaqiao University	SAMN04272205	GCA_001482795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/795/GCA_001482795.1_ASM148279v1	-	12012-2 PRCM
Salinispora pacifica CNT001	1136416	PRJNA169838	169838	Terrabacteria group	Actinobacteria	5.49231	69.8	-	AZWC01	82	5133	4749	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597233	GCA_000514535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/535/GCA_000514535.1_ASM51453v1	-	CNT001
Leptospira kirschneri serovar Grippotyphosa str. UT130	1049947	PRJNA74245	74245	Spirochaetes	Spirochaetia	4.46503	36	-	AHQZ01	410	4060	3666	2/3/12	5/18/17	Scaffold	J. Craig Venter Institute	SAMN00739395	GCA_000246675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/675/GCA_000246675.2_CLC_glsol173	-	UT130
Rhodococcus fascians	1828	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.93302	64.4	-	NOZN01	46	5621	5461	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07414745	GCA_002259465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/465/GCA_002259465.1_ASM225946v1	-	B3
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28391	32.4	chromosome:AP017586.1	-	1	-	-	1/24/17	1/27/17	Chromosome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053861	GCA_002357015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/015/GCA_002357015.1_ASM235701v1	-	HH-16
Vibrio campbellii	680	PRJNA257165	257165	Proteobacteria	Gammaproteobacteria	5.27882	45.6	-	JPTI01	2777	-	-	7/22/15	7/22/15	Contig	Naval Research Laboratory	SAMN02948017	GCA_001185395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/395/GCA_001185395.1_ASM118539v1	-	CAIM198
Mycobacterium chelonae	1774	PRJNA347845	347845	Terrabacteria group	Actinobacteria	5.11476	64	-	MLCK01	21	5059	4940	1/11/17	4/6/17	Contig	University of Georgia	SAMN05897975	GCA_001942575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/575/GCA_001942575.1_ASM194257v1	-	37256
Geobacillus sp. WSUCF1	886559	PRJNA192273	192273	Terrabacteria group	Firmicutes	3.40238	52.2	-	ATCO01	346	4180	4144	7/11/13	1/8/14	Contig	South Dakota School of Mines and Technology	SAMN02471005	GCA_000422025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/025/GCA_000422025.1_DUJ	23950119	WSUCF1
Morganella morganii	582	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.26151	50.2	-	JZSH01	661	4425	2375	3/10/15	3/10/15	Contig	FDA/CFSAN	SAMN03295488	GCA_000950365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/365/GCA_000950365.1_CFSAN029440_01.0	-	GCSL-TSO-24
Streptococcus sobrinus TCI-366	1074079	PRJNA71925	71925	Terrabacteria group	Firmicutes	2.07038	43.6	-	AGHB01	298	2090	1851	10/6/11	3/30/17	Contig	JCVI	SAMN02436538	GCA_000228305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/305/GCA_000228305.2_SMUT2-NEX_8-366	-	TCI-366
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.69547	66.5	-	LOUF01	134	8048	7601	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449167	GCA_001522785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/785/GCA_001522785.1_ASM152278v1	-	INT3-BP108
Mycobacterium africanum MAL020185	1354189	PRJNA211707	211707	Terrabacteria group	Actinobacteria	4.39506	65.5	-	JKYL01	2	4241	4030	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02231174	GCA_000667445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/445/GCA_000667445.1_Myco_afri_MAL020185_V1	-	MAL020185
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96568	64.1	-	FVEX01	19	4907	4744	3/10/17	3/18/17	Contig	SC	SAMEA2071374	GCA_900132285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/285/GCA_900132285.1_10665_4_61	-	316
Aeromonas veronii bv. veronii	197701	PRJEB7044	267815	Proteobacteria	Gammaproteobacteria	4.51642	58.9	-	CDDK01	52	4170	3999	11/24/14	4/3/17	Scaffold	UCONNMISEQ	SAMEA2752404	GCA_000820225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/225/GCA_000820225.1_PRJEB7044	-	CECT 4257
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.06858	55.1	-	LAAO01	55	5005	4795	3/19/15	4/6/17	Contig	JCVI	SAMN03283308	GCA_000956775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/775/GCA_000956775.1_ASM95677v1	-	33850
Xanthomonas perforans	442694	PRJNA276682	276682	Proteobacteria	Gammaproteobacteria	5.23718	64.7	-	JZVX01	81	4755	4406	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03379911	GCA_001009935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/935/GCA_001009935.1_ASM100993v1	26089818	GEV1044
Streptococcus pseudopneumoniae	257758	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.09475	39.5	-	JVFV01	44	2117	1952	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197663	GCA_001073085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/085/GCA_001073085.1_ASM107308v1	26230489	469_SPSE
Kingella kingae KK260	1348242	PRJEB4190	209620	Proteobacteria	Betaproteobacteria	1.99136	46.7	-	CBRZ01	1	2001	1765	9/10/13	4/2/17	Scaffold	URMITE	SAMEA2272512	GCA_000470455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/455/GCA_000470455.1_KK260	-	KK260
Vibrio anguillarum	55601	PRJNA267044	267044	Proteobacteria	Gammaproteobacteria	4.35133	44.6822	chromosome I:CP010084.1; chromosome II:CP010085.1	-	2	3658	3511	2/7/17	2/7/17	Chromosome	University of Copenhagen	SAMN03177464	GCA_001989995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/995/GCA_001989995.1_ASM198999v1	-	DSM 21597
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.97816	55	-	JUIB01	78	4943	4692	12/16/14	3/25/17	Contig	JCVI	SAMN03012820	GCA_000802805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/805/GCA_000802805.1_SPADES_assembly_of_Enterobacter_cloacae_ND4	-	ND4
Streptococcus parasanguinis F0405	905067	PRJNA53565	53565	Terrabacteria group	Firmicutes	2.0503	42	-	AEKM01	16	2062	1978	11/4/10	9/20/13	Contig	J. Craig Venter Institute	SAMN00115113	GCA_000180035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/180/035/GCA_000180035.1_ASM18003v1	-	F0405
Fusobacterium necrophorum subsp. funduliforme	143387	PRJNA315619	315619	Fusobacteria	Fusobacteriia	2.20183	35	-	LVFC01	56	2206	2094	3/25/16	4/5/17	Contig	Aarhus University	SAMN04570270	GCA_001597575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/575/GCA_001597575.1_ASM159757v1	-	F1351
Citrobacter freundii	546	PRJNA252011	252011	Proteobacteria	Gammaproteobacteria	5.25484	51.5	-	JRTK01	138	5237	4977	10/26/15	4/4/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872793	GCA_001413255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/255/GCA_001413255.1_ASM141325v1	25501822	RU2 BHI17
Leptospira santarosai	28183	PRJNA257150	257150	Spirochaetes	Spirochaetia	3.8711	41.8	-	JQRL01	212	3823	3486	2/24/16	4/5/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947957	GCA_001569305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/305/GCA_001569305.1_ASM156930v1	26833181	56274
Pantoea ananatis	553	PRJEB19578	376361	Proteobacteria	Gammaproteobacteria	4.62424	53.5	-	FUXY01	16	4331	4165	3/4/17	3/11/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03097719	GCA_900167295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/295/GCA_900167295.1_IMG-taxon_2684622997_annotated_assembly	-	NFIX48
Riemerella anatipestifer	34085	PRJNA309005	309005	FCB group	Bacteroidetes/Chlorobi group	2.11542	35.1	-	LUDL01	71	1981	1911	6/20/16	4/5/17	Scaffold	Sichuan Agricultural University	SAMN04419311	GCA_001670645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/670/645/GCA_001670645.1_RCAD0181	-	RCAD0181
Acinetobacter pittii	48296	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.97838	38.8	-	LLGE01	220	3959	3711	10/27/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145696	GCA_001415105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/105/GCA_001415105.1_ASM141510v1	-	ABBL074
Xanthomonas euvesicatoria	456327	PRJNA275498	275498	Proteobacteria	Gammaproteobacteria	5.13742	64.7	-	JZLZ01	101	4603	4195	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03349332	GCA_001008895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/895/GCA_001008895.1_v1	26089818	679
Pseudomonas amygdali pv. morsprunorum	129138	PRJNA287460	287460	Proteobacteria	Gammaproteobacteria	6.47012	58.4	-	LIIA01	263	6320	5668	1/25/16	4/4/17	Contig	University of Edinburgh	SAMN03992207	GCA_001535755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/755/GCA_001535755.1_ASM153575v1	27145446	HRI-W 5261
Brucella sp. CMUL 036	1905700	PRJNA344966	344966	Proteobacteria	Alphaproteobacteria	3.2947	57.2	-	MKQB01	43	3362	3123	1/6/17	4/16/17	Contig	LAU	SAMN05853709	GCA_001937885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/885/GCA_001937885.1_ASM193788v1	-	CMUL 036
Enterobacter asburiae	61645	PRJNA278429	278429	Proteobacteria	Gammaproteobacteria	4.72285	55.4	-	LDQE01	72	4540	4336	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401401	GCA_001475795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/795/GCA_001475795.1_ASM147579v1	26793183	NS34
Solibacillus silvestris StLB046	1002809	PRJDA65037	65037	Terrabacteria group	Firmicutes	3.98423	38.5903	chromosome:NC_018065.1/AP012157.1; plasmid pSSIL1:NC_018069.1/AP012158.1	-	2	4014	3824	4/5/11	4/7/17	Complete Genome	Department of Material and Environmental Chemistry Utsunomiya University	SAMD00060988	GCA_000271325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/325/GCA_000271325.1_ASM27132v1	22019407	StLB046
Vibrio alginolyticus	663	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.21044	44.7	-	LRIG01	3	4852	4555	1/22/16	4/4/17	Contig	US Food and Drug Administration 	SAMN03996257	GCA_001525595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/595/GCA_001525595.1_ASM152559v1	-	LMG 11650
Pseudoalteromonas sp. '520P1 No. 423'	1690037	PRJDB1722	244140	Proteobacteria	Gammaproteobacteria	5.38761	35.2	-	BBZB01	2	4884	4481	8/8/15	4/11/17	Contig	Kochi University of Technology	SAMD00035723	GCA_001269985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/985/GCA_001269985.1_ASM126998v1	-	520P1 No. 423
Pseudomonas savastanoi	29438	PRJNA388575	388575	Proteobacteria	Gammaproteobacteria	5.86762	58.1	-	NIAX01	218	5551	5038	8/25/17	8/28/17	Scaffold	Savastovar	SAMN07179224	GCA_002269885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/885/GCA_002269885.1_ASM226988v1	-	Ph3
Pseudomonas syringae pv. maculicola	59511	PRJNA285237	285237	Proteobacteria	Gammaproteobacteria	6.25204	58.4	-	LGLH01	91	5712	5399	9/18/15	4/4/17	Scaffold	University of Toronto	SAMN03837739	GCA_001293855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/855/GCA_001293855.1_Pma90_32	-	90_32
Achromobacter xylosoxidans	85698	PRJNA184698	184698	Proteobacteria	Betaproteobacteria	7.21241	66.1	-	MTLG01	132	6738	6577	6/14/17	6/19/17	Contig	Georgia Institute of Technology	SAMN06009451	GCA_002192695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/695/GCA_002192695.1_ASM219269v1	-	B_1
Streptococcus oralis	1303	PRJNA242575	242575	Terrabacteria group	Firmicutes	1.87397	41.1	-	JPGA01	11	1944	1785	7/7/14	4/2/17	Contig	Aarhus University	SAMN02836942	GCA_000722675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/675/GCA_000722675.1_ASM72267v1	25053789	SK141
Acinetobacter nosocomialis P020	1285584	PRJNA186920	186920	Proteobacteria	Gammaproteobacteria	4.06757	38.7	-	APCE01	240	3900	3745	6/5/17	6/7/17	Contig	National Taiwan University Hospital	SAMN06458192	GCA_002166815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/815/GCA_002166815.1_AN_P020_1.0	-	P020
Klebsiella variicola	244366	PRJNA288371	288371	Proteobacteria	Gammaproteobacteria	5.76686	57.4	-	LFQQ01	145	5778	5485	6/21/16	2/22/17	Contig	Memorial University of Newfoundland	SAMN03799036	GCA_001674935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/935/GCA_001674935.1_ASM167493v1	-	NL58
Rhodococcus hoagii	43767	PRJNA316970	316970	Terrabacteria group	Actinobacteria	5.01387	68.8	-	LWHV01	24	4658	4547	4/18/17	6/6/17	Contig	The University of Edinburgh	SAMN04632050	GCA_002095125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/125/GCA_002095125.1_ASM209512v1	27638249	PAM1357
Staphylococcus capitis	29388	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.57911	32.9	-	JVEM01	52	2474	2393	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197698	GCA_001065245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/245/GCA_001065245.1_ASM106524v1	26230489	505_SAUR
Staphylococcus hominis	1290	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.18464	31.3	-	JVEB01	48	2143	2068	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197709	GCA_001071235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/235/GCA_001071235.1_ASM107123v1	26230489	515_SHAE
Lactobacillus paracasei subsp. paracasei Lpp74	1256199	PRJNA178426	178426	Terrabacteria group	Firmicutes	3.03271	46.3	-	ANJU01	190	3163	2880	6/11/13	4/1/17	Contig	Danone Research	SAMN02469728	GCA_000410235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/235/GCA_000410235.1_ASM41023v1	23894338	Lpp74
Gardnerella vaginalis AMD	682147	PRJNA40893	40893	Terrabacteria group	Actinobacteria	1.60676	42.1	-	ADAM01	117	1280	1204	5/26/10	3/30/17	Contig	"Center for the Study of Biological Complexity, Virginia Commonwealth University"	SAMN02472072	GCA_000176475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/475/GCA_000176475.1_ASM17647v1	20540756	AMD
Aggregatibacter actinomycetemcomitans serotype b str. SCC1398	907491	PRJNA53937	53937	Proteobacteria	Gammaproteobacteria	2.04285	44.4	-	AEJP02	34	2079	1893	9/29/11	4/3/17	Scaffold	University of Southern California School of Dentistry	SAMN02471948	GCA_000226815.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/815/GCA_000226815.3_AaSCC1398v2.0	23194436	SCC1398
Lactobacillus crispatus	47770	PRJNA290636	290636	Terrabacteria group	Firmicutes	2.20196	36.9	-	LJDA01	258	2281	2088	2/2/16	4/4/17	Scaffold	Vaginal Microbiome Consortium	SAMN03893600	GCA_001546025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/025/GCA_001546025.1_ASM154602v1	-	VMC2
Mycobacterium kansasii	1768	PRJNA374853	374853	Terrabacteria group	Actinobacteria	6.26758	65.9	-	MWKZ01	52	5785	5441	4/11/17	4/11/17	Scaffold	University of Lodz	SAMN06339045	GCA_002086935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/935/GCA_002086935.1_ASM208693v1	-	7MK
Pectobacterium carotovorum	554	PRJNA381622	381622	Proteobacteria	Gammaproteobacteria	4.77362	52.2	-	NCQL01	154	4282	4087	8/14/17	8/16/17	Contig	Biotechnology Institute of UNAM	SAMN06684312	GCA_002250255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/255/GCA_002250255.1_Bf45_V1	-	BF45
Streptococcus equinus	1335	PRJEB17296	351454	Terrabacteria group	Firmicutes	1.91275	37.3	-	FOOP01	14	1866	1821	10/31/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216385	GCA_900113235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/235/GCA_900113235.1_IMG-taxon_2654588204_annotated_assembly	-	MPR4
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.75848	47.6	-	MECF01	77	3476	3300	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320421	GCA_001883105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/105/GCA_001883105.1_ASM188310v1	-	07/3828-6E
Escherichia albertii	208962	PRJDB3047	301492	Proteobacteria	Gammaproteobacteria	4.57104	49.7	-	BBVX01	43	4578	4283	11/6/15	2/25/17	Scaffold	University of Miyazaki	SAMD00026635	GCA_001514945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/945/GCA_001514945.1_ASM151494v1	26537224	EC05-44
Lactobacillus johnsonii	33959	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.83089	34.2	-	DBZT01	42	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06450955	GCA_002311255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/255/GCA_002311255.1_ASM231125v1	28894102	-
Flavobacterium psychrophilum	96345	PRJNA356780	356780	FCB group	Bacteroidetes/Chlorobi group	2.682	32.6	-	MTCD01	592	2566	2215	5/19/17	5/24/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN06127406	GCA_002150295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/295/GCA_002150295.1_ASM215029v1	-	FPG102
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.20302	67.4	-	LOVG01	132	6495	6145	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449196	GCA_001523385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/385/GCA_001523385.1_ASM152338v1	-	MSMB1166
Aeromonas hydrophila	644	PRJNA237913	237913	Proteobacteria	Gammaproteobacteria	4.80653	61.1	-	JDWB01	150	4481	4229	6/16/14	4/2/17	Contig	USFDA	SAMN02597476	GCA_000708105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/105/GCA_000708105.1_Ahyd_NF1	-	NF1
Pseudomonas stutzeri	316	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	5.04417	62.8	-	LWEF01	607	4716	4428	5/2/16	4/5/17	Contig	Massachusetts Institute of Technology	SAMN04580753	GCA_001635435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/435/GCA_001635435.1_ASM163543v1	-	HI00D01
Paenibacillus polymyxa	1406	PRJNA304353	304353	Terrabacteria group	Firmicutes	5.77676	45.2	-	LNZF01	39	5202	4884	12/23/15	4/5/17	Scaffold	Unversity of Jinan	SAMN04299553	GCA_001481575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/575/GCA_001481575.1_ASM148157v1	-	KF-1
Vibrio sp. S457-15	1620393	PRJNA275537	275537	Proteobacteria	Gammaproteobacteria	5.11162	45.2	-	JYOQ01	181	4872	4602	3/23/15	4/10/17	Contig	Health Canada	SAMN03349601	GCA_000960545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/545/GCA_000960545.1_ASM96054v1	-	S457-15
Staphylococcus saprophyticus	29385	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.58986	33	-	LMYQ01	32	2526	2366	9/28/16	4/5/17	Scaffold	Tufts University	SAMN04244232	GCA_001747265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/265/GCA_001747265.1_ASM174726v1	-	7108
Streptococcus sanguinis	1305	PRJNA280681	280681	Terrabacteria group	Firmicutes	2.3679	43.2	-	LAYH01	162	2319	2229	3/11/16	4/5/17	Contig	University of Malaya	SAMN03480699	GCA_001589015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/589/015/GCA_001589015.1_ASM158901v1	-	PJM8
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.2037	36.7	-	LPRV01	20	2341	2197	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305156	GCA_001560315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/315/GCA_001560315.1_NG05A_C04	-	NG05A_C04
Bifidobacterium breve	1685	PRJDB4597	325619	Terrabacteria group	Actinobacteria	2.34992	58.8	-	BCXN01	60	2082	1860	6/10/16	4/5/17	Contig	Yakult Central Institute	SAMD00047598	GCA_001685745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/745/GCA_001685745.1_ASM168574v1	27340092	BR-10
Mycobacterium abscessus 9808	1246644	PRJNA178140	178140	Terrabacteria group	Actinobacteria	5.21858	64.1	-	ANAR01	68	5246	5083	1/22/13	5/19/17	Scaffold	BGI	SAMN02470976	GCA_000332605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/605/GCA_000332605.1_SOAPdenovo_v1.06	-	9808
Moraxella catarrhalis	480	PRJNA297370	297370	Proteobacteria	Gammaproteobacteria	1.87841	41.5	-	LXHF01	120	1795	1568	6/3/16	4/5/17	Contig	Drexel University College of Medicine	SAMN04122862	GCA_001656285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/285/GCA_001656285.1_ASM165628v1	26912404	S11
Lactobacillus salivarius	1624	PRJNA321782	321782	Terrabacteria group	Firmicutes	2.1157	32.7	-	LXZK01	106	2205	1997	9/12/17	9/14/17	Contig	Seoul National University	SAMN05003800	GCA_002289735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/735/GCA_002289735.1_ASM228973v1	-	KLF004
Klebsiella oxytoca NBRC 105695	1218097	PRJDB270	172093	Proteobacteria	Gammaproteobacteria	5.7931	55.1	-	BCZK01	43	5507	5300	3/11/16	2/21/17	Contig	National Institute of Technology and Evaluation	SAMD00046899	GCA_001598695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/695/GCA_001598695.1_ASM159869v1	-	NBRC 105695
Cronobacter sakazakii	28141	PRJNA251639	251639	Proteobacteria	Gammaproteobacteria	4.57231	56.9	-	JOLC01	124	4481	4233	10/9/15	4/4/17	Scaffold	"Nottingham Trent University, UK"	SAMN02837661	GCA_001309415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/415/GCA_001309415.1_ASM130941v1	26438044	711
Enterobacter cloacae	550	PRJNA310238	310238	Proteobacteria	Gammaproteobacteria	4.80116	56.2	chromosome:NZ_CP014280.1/CP014280.1	-	1	4583	4385	2/17/16	3/27/17	Chromosome	Mayo Clinic	SAMN04448597	GCA_001562175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/175/GCA_001562175.1_ASM156217v1	-	-
Proteus mirabilis	584	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.93186	38.8	-	JUXR01	331	3648	3460	7/10/15	4/3/17	Contig	University of Washington	SAMN03197875	GCA_001066855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/855/GCA_001066855.1_ASM106685v1	26230489	672_PMIR
Mycoplasma bovis	28903	PRJNA306895	306895	Terrabacteria group	Tenericutes	0.953454	29.3	-	LQDM01	75	837	739	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366508	GCA_001929505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/505/GCA_001929505.1_ASM192950v1	-	2307MB
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.46498	32.7	-	CUCS01	84	2438	2321	3/31/15	3/26/17	Contig	SC	SAMEA1035029	GCA_001227365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/365/GCA_001227365.1_7067_4_33	-	26-24
Propionibacterium acnes HL053PA1	765066	PRJNA49163	49163	Terrabacteria group	Actinobacteria	2.52536	60.2	-	ADZD01	25	2574	2437	7/29/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189224	GCA_000144185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/185/GCA_000144185.1_ASM14418v1	-	HL053PA1
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.70852	67.4	-	LOWK01	51	6064	5805	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449231	GCA_001525665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/665/GCA_001525665.1_ASM152566v1	-	FL-2-3-10-S1-D7
Burkholderia sp. Leaf177	1736287	PRJNA297956	297956	Proteobacteria	Betaproteobacteria	6.80429	59.2	-	LMPF01	26	6166	6002	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151667	GCA_001424345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/345/GCA_001424345.1_Leaf1773	26633631	Leaf177
Campylobacter coli JL-CDD-LMH	1318631	PRJNA196811	196811	Proteobacteria	delta/epsilon subdivisions	1.75325	31.3	-	AWRW01	12	1831	1732	6/23/17	6/28/17	Scaffold	"State Key Laboratory for Infectious Disease Prevention and Control, and National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China"	SAMN07269617	GCA_002207965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/965/GCA_002207965.1_ASM220796v1	-	JL-CDD-LMH
Lactobacillus brevis	1580	PRJEB17528	359565	Terrabacteria group	Firmicutes	2.59131	45.6	-	FPCM01	250	2655	2382	12/31/16	5/31/17	Contig	Microbiology and Fermentation	SAMEA4527926	GCA_900116945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/945/GCA_900116945.1_ASM90011694v1	-	-
Mannheimia haemolytica	75985	PRJNA181191	181191	Proteobacteria	Gammaproteobacteria	2.60328	41.1	-	LFXY01	122	2698	2513	3/23/16	4/5/17	Contig	Agriculture and Agri-Food Canada	SAMN03840563	GCA_001596585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/585/GCA_001596585.1_ASM159658v1	26926339	L044A
Lactococcus piscium MKFS47	297352	PRJEB8222	280069	Terrabacteria group	Firmicutes	2.50307	38.5854	chromosome I:NZ_LN774769.1/LN774769.1; plasmid II:NZ_LN774770.1/LN774770.1; plasmid III:NZ_LN774771.1/LN774771.1	-	3	2489	2356	4/2/15	4/10/17	Complete Genome	UNIVERSITY OF HELSINKI	SAMEA3208644	GCA_000981525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/525/GCA_000981525.1_L_piscium	-	MKFS47
Serratia marcescens MC6000	1333583	PRJNA203057	203057	Proteobacteria	Gammaproteobacteria	5.32774	59.3	-	ATOI01	133	5162	4935	7/3/13	3/27/17	Scaffold	The Genome Institute	SAMN02436715	GCA_000418855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/855/GCA_000418855.2_S_marcescensMC6000-1.0	-	MC6000
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.22355	40	-	FPIF01	96	1149	1026	5/10/17	5/24/17	Scaffold	WTSI	SAMEA893013	GCA_900118575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/575/GCA_900118575.1_4880_2_5	-	S82/3
Leuconostoc mesenteroides subsp. cremoris	33965	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.67437	38.2	-	MPEA01	86	1832	1438	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981473	GCA_002092315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/315/GCA_002092315.1_ASM209231v1	28217118	LMGCF11
Anaplasma phagocytophilum	948	PRJEB13033	321622	Proteobacteria	Alphaproteobacteria	1.77221	41.5	-	FLMC02	300	1579	1534	6/2/16	10/5/16	Scaffold	INRA-MIG	SAMEA4018767	GCA_900088655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/655/GCA_900088655.2_ANAPH2_2	-	H2
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.0923	41.5	-	JJOT01	136	3539	3323	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708943	GCA_000979375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/375/GCA_000979375.1_gtlEnvA5udCFS	25756680	2.F.T.0.2
Helicobacter cinaedi PAGU611	1172562	PRJDB88	159977	Proteobacteria	delta/epsilon subdivisions	2.1014	38.5221	chromosome:NC_017761.1/AP012344.1; plasmid pHci1:NC_017762.1/AP012345.1	-	2	2153	1989	4/20/12	4/7/17	Complete Genome	Kazusa DNA Research Institute	SAMD00061064	GCA_000284635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/635/GCA_000284635.1_ASM28463v1	22740670	PAGU611
Yersinia enterocolitica IP2222	947561	PRJEA61957	61957	Proteobacteria	Gammaproteobacteria	4.75396	47.1	-	CACZ01	74	4469	4165	3/14/11	5/19/17	Contig	Max von Pettenkofer-Institute	SAMEA2272317	GCA_000285015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/015/GCA_000285015.1_ASM28501v1	-	IP2222
Cyanothece sp. PCC 7424	65393	PRJNA20479	20479	Terrabacteria group	Cyanobacteria/Melainabacteria group	6.55417	38.5033	chromosome:NC_011729.1/CP001291.1; plasmid pP742401:NC_011738.1/CP001292.1; plasmid pP742402:NC_011737.1/CP001293.1; plasmid pP742403:NC_011730.1/CP001294.1; plasmid pP742404:NC_011732.1/CP001295.1; plasmid pP742405:NC_011733.1/CP001296.1; plasmid pP742406:NC_011734.1/CP001297.1	-	7	5842	5603	12/17/08	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000286	GCA_000021825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/825/GCA_000021825.1_ASM2182v1	-	PCC 7424
[Haemophilus] ducreyi	730	PRJNA270894	270894	Proteobacteria	Gammaproteobacteria	1.55775	38	chromosome:CP011229.1	-	1	1504	1340	6/30/15	7/23/15	Chromosome	Indiana University School of Medicine	SAMN03271828	GCA_001043455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/455/GCA_001043455.1_ASM104345v1	-	GU7
Corynebacterium diphtheriae	1717	PRJNA339923	339923	Terrabacteria group	Actinobacteria	2.46482	53.5	-	MDYT01	105	2406	2109	9/12/16	4/21/17	Contig	"CMC, Vellore"	SAMN05615420	GCA_001723455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/455/GCA_001723455.1_ASM172345v1	-	TH1141
Sinorhizobium meliloti BO21CC	928723	PRJNA74719	74719	Proteobacteria	Alphaproteobacteria	6.98904	62.1	-	AXBL01	3	6985	6428	9/30/13	4/2/17	Scaffold	JGI	SAMN02440778	GCA_000473405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/405/GCA_000473405.1_ASM47340v1	-	BO21CC
Bordetella bronchiseptica MBORD681	1331229	PRJNA202141	202141	Proteobacteria	Betaproteobacteria	5.15831	68.3	-	JGXP01	70	4872	4750	5/12/14	4/2/17	Contig	JCVI	SAMN02231433	GCA_000689835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/835/GCA_000689835.1_gbb33v01	25908122	MBORD681
Capnocytophaga sputigena	1019	PRJNA369395	369395	FCB group	Bacteroidetes/Chlorobi group	3.07475	38.5	chromosome:NZ_CP022385.1/CP022385.1	-	1	2825	2688	9/14/17	9/16/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06289148	GCA_002302395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/395/GCA_002302395.1_ASM230239v1	-	KC1668
Brucella melitensis bv. 2 str. 63/9	520465	PRJNA243893	243893	Proteobacteria	Alphaproteobacteria	3.31296	57.1716	chromosome 1:NZ_CP007789.1/CP007789.1; chromosome 2:NZ_CP007788.1/CP007788.1	-	2	3386	3148	8/15/14	4/2/17	Chromosome	Los Alamos National Laboratory	SAMN02786857	GCA_000740395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/395/GCA_000740395.1_ASM74039v1	25237024	63/9
Clostridium sporogenes	1509	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.74304	26.4	-	DFMY01	44	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452538	GCA_002375805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/805/GCA_002375805.1_ASM237580v1	28894102	-
Lactobacillus rhamnosus 51B	1408180	PRJNA222883	222883	Terrabacteria group	Firmicutes	2.95258	46.6	-	JMSI01	21	2965	2781	6/10/14	4/2/17	Contig	Vavilov Institute of General Genetics	SAMN02776192	GCA_000699985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/985/GCA_000699985.1_ASM69998v1	-	51B
Pasteurella multocida 671/90	1290393	PRJNA188485	188485	Proteobacteria	Gammaproteobacteria	2.2452	40.2	-	ARWR01	21	2105	2030	6/18/13	4/1/17	Contig	Moredun Research Institute	SAMN02470557	GCA_000412075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/075/GCA_000412075.1_Pmultocida_hybrid671-90	24092794	671/90
[Haemophilus] parasuis	738	PRJNA301181	301181	Proteobacteria	Gammaproteobacteria	2.24297	39.9	-	MNAR01	161	2245	2034	1/6/17	4/6/17	Scaffold	Chinese Academy of Agricultural Sciences	SAMN04230881	GCA_001938245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/245/GCA_001938245.1_ASM193824v1	-	H36
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.07316	41.4	-	CVXX01	80	2013	1845	6/23/15	3/26/17	Contig	SC	SAMEA1032765	GCA_001175305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/305/GCA_001175305.1_6817_2_85	-	EQUI0038
Bifidobacterium bifidum	1681	PRJNA345151	345151	Terrabacteria group	Actinobacteria	2.21963	62.4	-	NBYL01	32	1871	1709	4/28/17	5/3/17	Contig	Institute for Cellular and Intracellular Symbiosis	SAMN05858649	GCA_002114145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/145/GCA_002114145.1_ASM211414v1	-	ICIS-310
Yersinia frederiksenii	29484	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	5.00514	47.5	-	NHOK01	54	4683	4467	6/9/17	6/12/17	Scaffold	FDA/CFSAN	SAMN06330409	GCA_002188975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/975/GCA_002188975.1_ASM218897v1	-	CFSAN060534
Bacillus mycoides	1405	PRJNA260746	260746	Terrabacteria group	Firmicutes	6.49666	38.2	-	JYCJ01	107	-	-	3/5/15	3/5/15	Contig	Los Alamos National Laboratory	SAMN03025784	GCA_000948355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/355/GCA_000948355.1_BFA_8_A	-	11kri323
Stenotrophomonas maltophilia M30	1451188	PRJNA235918	235918	Proteobacteria	Gammaproteobacteria	4.90201	66.4	-	JELS02	193	4594	4401	3/31/14	3/24/17	Contig	"IBB, Autonomous University of Barcelona."	SAMN02592618	GCA_000611735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/735/GCA_000611735.2_ASM61173v2	24926059	M30
Bacillus amyloliquefaciens UASWS BA1	1384051	PRJNA214573	214573	Terrabacteria group	Firmicutes	3.94409	46.6	-	AWQY01	24	3922	3745	9/18/13	4/2/17	Contig	University of Applied Sciences of Western Switzerland hepia	SAMN02313291	GCA_000469015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/015/GCA_000469015.1_BA1	24503983	UASWS BA1
Bifidobacterium animalis subsp. animalis MCC 1489	1365957	PRJNA215972	215972	Terrabacteria group	Actinobacteria	1.90992	60.5	-	AWFO01	14	1616	1484	8/11/15	4/3/17	Scaffold	"Food Science and Technology Institute, Morinaga Milk Industry Co., Ltd"	SAMN03978810	GCA_001263835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/835/GCA_001263835.1_ASM126383v1	26236711	MCC 1489
Chlamydia psittaci 09DC78	1112269	PRJNA77111	77111	PVC group	Chlamydiae	1.21732	39.3	-	ATLA01	89	1066	980	6/25/13	4/1/17	Scaffold	University of Maryland School of Medicine	SAMN00860217	GCA_000415745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/745/GCA_000415745.1_ASM41574v1	-	09DC78
Enterococcus faecium	1352	PRJNA292795	292795	Terrabacteria group	Firmicutes	3.22308	37.7503	chromosome:NZ_CP012447.1/CP012447.1; plasmid ISMMS_VRE4_p1:NZ_CP012450.1/CP012450.1; plasmid ISMMS_VRE4_p2:NZ_CP012448.1/CP012448.1; plasmid ISMMS_VRE4_p3:NZ_CP012449.1/CP012449.1; plasmid ISMMS_VRE4_p4:NZ_CP012451.1/CP012451.1; plasmid ISMMS_VRE4_p5:NZ_CP012452.1/CP012452.1; plasmid ISMMS_VRE4_p6:NZ_CP012453.1/CP012453.1	-	7	3346	3053	9/7/16	4/17/17	Chromosome	Mount Sinai School of Medicine	SAMN03988559	GCA_001721005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/005/GCA_001721005.1_ASM172100v1	28301471	ISMMS_VRE_4
Neisseria gonorrhoeae F62	528351	PRJNA36329	36329	Proteobacteria	Betaproteobacteria	2.15844	52.6	-	ADAA01	59	2541	2164	3/23/10	4/11/17	Scaffold	Broad Institute	SAMN02595364	GCA_000163535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/535/GCA_000163535.1_ASM16353v1	-	F62
Streptococcus mutans TCI-164	1074136	PRJNA72021	72021	Terrabacteria group	Firmicutes	1.8292	37	-	AGKY01	115	1853	1762	10/6/11	3/22/17	Contig	JCVI	SAMN02436604	GCA_000229145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/145/GCA_000229145.2_SMUT5-NEX_5-164	-	TCI-164
Borrelia garinii IPT99	1408836	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.16793	28.1	-	AYAL01	422	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378803	GCA_000501095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/095/GCA_000501095.1_BorGarIPT99	-	IPT99
Microcystis aeruginosa FCY-26	1150859	PRJNA84433	84433	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.68869	43.2	-	AJHB01	1944	-	-	6/20/17	6/20/17	Contig	Hanyang University	SAMN07247203	GCA_002202315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/315/GCA_002202315.1_MaFCY26-1.0	22814493	FCY-26
Enterococcus faecalis TX0027	749498	PRJNA47151	47151	Terrabacteria group	Firmicutes	3.06166	37.2	-	AEBM01	59	3160	3022	8/31/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189105	GCA_000147535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/535/GCA_000147535.1_ASM14753v1	-	TX0027
Brucella suis F7/06-2	1169240	PRJNA173518	173518	Proteobacteria	Alphaproteobacteria	3.33596	57.2	-	AQLE01	4	3394	3158	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN00839715	GCA_000371245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/245/GCA_000371245.1_Bruc_suis_F7_06-2_V1	-	F7/06-2
Clavibacter michiganensis subsp. tessellarius	31965	PRJNA379105	379105	Terrabacteria group	Actinobacteria	3.31853	73.7	-	MZMQ01	2	3145	3008	3/24/17	8/6/17	Contig	Canadian Food Inspection Agency	SAMN06579315	GCA_002240635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/635/GCA_002240635.1_ASM224063v1	-	ATCC 33566
Rhizobium leguminosarum bv. trifolii SRDI565	935549	PRJNA81743	81743	Proteobacteria	Alphaproteobacteria	6.9056	60.7	-	AQUD01	7	6759	6417	4/19/13	5/19/17	Contig	JGI	SAMN02261296	GCA_000371905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/905/GCA_000371905.1_ASM37190v1	-	SRDI565
Treponema pallidum subsp. pallidum	161	PRJNA322283	322283	Spirochaetes	Spirochaetia	1.13915	52.8	chromosome:NZ_CP016053.1/CP016053.1	-	1	1065	1002	8/25/16	4/10/17	Chromosome	"National Institute of Health, Portugal"	SAMN05150358	GCA_001713015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/015/GCA_001713015.1_ASM171301v1	-	PT_SIF1063
Borrelia burgdorferi IPT87	1408875	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.27176	28.3	-	AYBY01	138	1320	699	12/3/13	4/2/17	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378842	GCA_000502035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/035/GCA_000502035.1_BorBurgIPT87	-	IPT87
Burkholderia multivorans	87883	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.60293	67.3	-	LPKG01	63	6230	5943	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449613	GCA_001532145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/145/GCA_001532145.1_ASM153214v1	-	MSMB612WGS
Clostridium botulinum B str. Osaka05	1407017	PRJDB1500	227279	Terrabacteria group	Firmicutes	4.40835	27.7	-	BAUF01	3	4211	3980	11/11/13	3/24/17	Scaffold	University of Miyazaki	SAMD00036773	GCA_000503815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/815/GCA_000503815.1_ASM50381v1	24459252	Osaka05
Aliivibrio fischeri	668	PRJNA318805	318805	Proteobacteria	Gammaproteobacteria	4.31769	38.3	-	MCGJ01	119	4078	3894	9/16/16	4/5/17	Scaffold	Massachusetts Institute of Technology	SAMN05449651	GCA_001730155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/155/GCA_001730155.1_ASM173015v1	-	5F7
Porphyromonas gingivalis	837	PRJEB10280	362716	FCB group	Bacteroidetes/Chlorobi group	2.42422	48.3	-	FUFH01	77	2236	1999	2/2/17	4/6/17	Scaffold	"Melbourne Dental School, University of Melbourne"	SAMEA3505348	GCA_900157255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/255/GCA_900157255.1_ATCC49417	-	ATCC 49417
Legionella pneumophila	446	PRJEB6403	251923	Proteobacteria	Gammaproteobacteria	3.5146	38.5	chromosome 1:NZ_LT906452.1/LT906452.1	-	1	3224	3041	8/15/17	8/28/17	Complete Genome	SC	SAMEA4040028	GCA_900186925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/925/GCA_900186925.1_48450_B02	-	NCTC11985
Lactobacillus fermentum	1613	PRJNA390617	390617	Terrabacteria group	Firmicutes	1.98289	52.1	-	NIWV01	149	2027	1752	6/21/17	6/24/17	Scaffold	Max Rubner-Institut	SAMN07246874	GCA_002204495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/495/GCA_002204495.1_ASM220449v1	-	BFE 6620
Vibrio harveyi	669	PRJNA302718	302718	Proteobacteria	Gammaproteobacteria	5.9522	45	-	LNRD01	74	5524	5285	2/10/16	4/4/17	Contig	University of Cambridge	SAMN04279314	GCA_001557775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/775/GCA_001557775.1_ASM155777v1	-	MOR3
Salinispora arenicola CNT799	1169172	PRJNA195856	195856	Terrabacteria group	Actinobacteria	5.62149	69.5	-	AZVD01	58	5085	4789	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597208	GCA_000514035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/035/GCA_000514035.1_ASM51403v1	-	CNT799
Lactobacillus casei	1582	PRJNA282947	282947	Terrabacteria group	Firmicutes	3.00103	47.9	-	LCUN01	26	2951	2739	5/26/15	4/3/17	Contig	Consiglio Nazionale delle Ricerche CNR	SAMN03580836	GCA_001013375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/013/375/GCA_001013375.1_ASM101337v1	27151805	N87
Coxiella burnetii	777	PRJEB5847	249032	Proteobacteria	Gammaproteobacteria	2.02317	42.6	-	CCAM01	109	2381	1999	3/25/14	4/2/17	Contig	ANIMAL HEALTH AND VETERINARY LABORATORIES AGENCY	SAMEA3139023	GCA_000723285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/285/GCA_000723285.1_EV-Cb-C13	-	EV-Cb_C13
Streptococcus pyogenes	1314	PRJNA376567	376567	Terrabacteria group	Firmicutes	1.89317	38.5	chromosome:NZ_CP022206.1/CP022206.1	-	1	1963	1823	7/28/17	8/1/17	Complete Genome	University of Copenhagen	SAMN06435541	GCA_002236855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/236/855/GCA_002236855.1_ASM223685v1	-	GURSA1
Vibrio parahaemolyticus IDH02640	1238210	PRJNA176645	176645	Proteobacteria	Gammaproteobacteria	5.22258	45.1	-	JAIH01	97	5073	4781	1/22/14	3/18/17	Scaffold	IGS	SAMN01924111	GCA_000521825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/825/GCA_000521825.2_vpIDH02640	-	IDH02640
Aeromonas salmonicida subsp. salmonicida	29491	PRJNA264317	264317	Proteobacteria	Gammaproteobacteria	5.05571	58.2	-	MIIO01	211	4809	4214	12/13/16	4/6/17	Contig	Universite Laval	SAMN05728465	GCA_001901985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/985/GCA_001901985.1_ASM190198v1	-	JF2267
Streptococcus mitis	28037	PRJNA242574	242574	Terrabacteria group	Firmicutes	1.93247	40.4	-	JPFT01	9	1903	1699	7/7/14	4/2/17	Contig	Aarhus University	SAMN02836935	GCA_000722815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/815/GCA_000722815.1_ASM72281v1	25053789	SK1126
Oenococcus oeni IOEB_9517	1428418	PRJNA229543	229543	Terrabacteria group	Firmicutes	1.74378	37.9	-	AZKG01	56	1790	1580	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02902410	GCA_000761685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/685/GCA_000761685.1_Oeoe_IOEB_9517_1.0	24901216	IOEB_9517
Xanthomonas oryzae X8-1A	1009854	PRJNA66099	66099	Proteobacteria	Gammaproteobacteria	4.59486	64	-	AFHL01	875	4395	3556	5/9/11	6/15/17	Contig	Colorado State University	SAMN02469643	GCA_000212775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/212/775/GCA_000212775.2_ASM21277v2	21515727	X8-1A
Campylobacter fetus subsp. testudinum	1507806	PRJNA285163	285163	Proteobacteria	delta/epsilon subdivisions	1.94167	32.9	-	LFLP01	145	1978	1892	8/5/16	4/5/17	Contig	Utrecht University	SAMN03784720	GCA_001699335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/335/GCA_001699335.1_ASM169933v1	27333878	12S04217-1
Streptococcus pyogenes	1314	PRJNA376567	376567	Terrabacteria group	Firmicutes	1.8902	38.5	chromosome:NZ_CP022354.1/CP022354.1	-	1	1959	1819	7/28/17	8/1/17	Complete Genome	University of Copenhagen	SAMN06434935	GCA_002236875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/236/875/GCA_002236875.1_ASM223687v1	-	GUR
Leptospira borgpetersenii	174	PRJNA257146	257146	Spirochaetes	Spirochaetia	3.9009	40	-	JQRZ01	220	3765	3422	2/24/16	4/5/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947777	GCA_001568495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/495/GCA_001568495.1_ASM156849v1	26833181	56607
Lactobacillus delbrueckii subsp. lactis DSM 20072	888027	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.87005	49.9	-	AZDE01	222	1901	1689	11/6/15	4/4/17	Scaffold	Shanghai Majorbio	SAMN02369369	GCA_001434635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/635/GCA_001434635.1_ASM143463v1	26415554	DSM 20072
Yersinia pseudotuberculosis	633	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.37122	47.5	-	CGGB01	45	4026	3718	3/15/15	4/4/17	Contig	SC	SAMEA859895	GCA_001319665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/665/GCA_001319665.1_5139_3_7	-	IP32938
Brucella abortus	235	PRJNA400357	400357	Proteobacteria	Alphaproteobacteria	3.30658	57.1707	chromosome 1:NZ_CP023229.1/CP023229.1; chromosome 2:NZ_CP023230.1/CP023230.1	-	2	3397	2978	9/12/17	9/14/17	Chromosome	IZSM-Portici	SAMN07572688	GCA_002291245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/245/GCA_002291245.1_ASM229124v1	-	7863
Enterococcus mundtii	53346	PRJNA337899	337899	Terrabacteria group	Firmicutes	3.01443	38.5	chromosome:NZ_CP022340.1/CP022340.1	-	1	2867	2653	7/12/17	9/21/17	Complete Genome	Zhejiang University	SAMN07459877	GCA_002216705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/705/GCA_002216705.1_ASM221670v1	-	EMB156
Streptococcus salivarius	1304	PRJNA320256	320256	Terrabacteria group	Firmicutes	2.31986	39.5	-	LXIN01	242	2284	2038	12/16/16	4/6/17	Contig	State University of Campinas	SAMN04934534	GCA_001906975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/975/GCA_001906975.1_ASM190697v1	-	84-12 S20
Shigella boydii	621	PRJNA288165	288165	Proteobacteria	Gammaproteobacteria	4.73245	50.4	-	LPTQ01	299	5119	4302	12/15/16	3/5/17	Contig	"University of Maryland, School of Medicine"	SAMN04001690	GCA_001906135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/135/GCA_001906135.1_ASM190613v1	-	600690
Clostridioides difficile T42	1215073	PRJEB203	222747	Terrabacteria group	Firmicutes	4.12783	28.5	-	CAMQ01	96	3850	3713	10/14/13	3/16/17	Scaffold	LPBA	SAMEA3138881	GCA_000530325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/325/GCA_000530325.1_T42	24482682	T42
Colwellia sp. NB097-1	1967665	PRJNA378583	378583	Proteobacteria	Gammaproteobacteria	4.66127	38.5	chromosome:NZ_CP020465.1/CP020465.1	-	1	3954	3807	4/3/17	8/6/17	Complete Genome	"Third Institute Of Oceanography,State Oceanic Administration"	SAMN06606376	GCA_002076895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/895/GCA_002076895.1_ASM207689v1	-	NB097-1
Candidatus Pelagibacter ubique	198252	PRJEB9287	287342	Proteobacteria	Alphaproteobacteria	0.575315	29.1	-	CVSP01	157	-	-	6/17/15	6/17/15	Contig	UNIVERSITY OF CALIFORNIA - SAN DIEGO	SAMEA3368567	GCA_001180125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/125/GCA_001180125.1_CLC_assembled_contigs	-	SCGC AAA795-N08
Ralstonia solanacearum	305	PRJEB7433	268819	Proteobacteria	Betaproteobacteria	5.5145	66.5	-	CDLY01	1	5089	4500	1/5/15	4/3/17	Scaffold	CIRAD	SAMEA3137589	GCA_000825905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/905/GCA_000825905.2_IBSBF1503	-	IBSBF1503
Streptococcus pyogenes	1314	PRJDB5086	340978	Terrabacteria group	Firmicutes	1.74198	38.5	chromosome:AP017629.1	-	1	1731	1659	8/27/16	8/27/16	Complete Genome	"Division of Bacteriology, Department of Infection and Immunity, School of Medicine, Jichi Medical University"	SAMD00057778	GCA_002355815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/815/GCA_002355815.1_ASM235581v1	-	JMUB1235
Corynebacterium glutamicum	1718	PRJNA305676	305676	Terrabacteria group	Actinobacteria	3.26342	54	-	LOQW01	32	3059	2934	12/21/16	5/1/17	Contig	Shanghai Institutes for Biological Sciences (SIBS) of Chinese Academy of Sciences (CAS)	SAMN04331506	GCA_001912155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/155/GCA_001912155.1_ASM191215v1	28198668	T6-13
Bacillus pumilus	1408	PRJNA277428	277428	Terrabacteria group	Firmicutes	3.67002	41.6	-	LDWT01	28	3756	3646	6/24/15	4/3/17	Contig	University of Malaya	SAMN03751792	GCA_001038765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/765/GCA_001038765.1_ASM103876v1	-	LK32
Streptococcus pyogenes	1314	PRJNA287028	287028	Terrabacteria group	Firmicutes	1.70939	38.5	chromosome:NZ_CP013839.1/CP013839.1	-	1	1698	1571	5/2/16	3/28/17	Complete Genome	Houston Methodist Research Institute	SAMN03775331	GCA_001635935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/935/GCA_001635935.1_ASM163593v1	27247229	MGAS23530
Streptococcus pyogenes	1314	PRJNA266333	266333	Terrabacteria group	Firmicutes	1.74135	38.5	chromosome:NZ_CP013840.1/CP013840.1	-	1	1736	1608	5/2/16	3/28/17	Complete Genome	Houston Methodist Research Institute	SAMN03161558	GCA_001635975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/975/GCA_001635975.1_ASM163597v1	27247229	MGAS27061
Burkholderia cenocepacia	95486	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	7.60936	67	-	JUPC01	381	7218	6823	7/10/15	3/26/17	Contig	University of Washington	SAMN03198098	GCA_001059335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/335/GCA_001059335.1_ASM105933v1	26230489	891_BCEN
Lactobacillus reuteri	1598	PRJNA342243	342243	Terrabacteria group	Firmicutes	2.20369	38.5	-	MIMH01	154	2219	2026	5/11/17	5/22/17	Contig	Seoul National University	SAMN05751482	GCA_002128525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/525/GCA_002128525.1_ASM212852v1	-	KLR1004
Streptococcus thermophilus MTCC 5461	1073570	PRJNA71269	71269	Terrabacteria group	Firmicutes	1.6199	39.3	-	ALIL01	144	1774	1457	2/1/13	4/11/17	Contig	Anand Agricultural University	SAMN02470979	GCA_000335495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/495/GCA_000335495.1_ASM33549v1	23568199	MTCC 5461
Bacteroides fragilis str. 2-F-2 #5	1339281	PRJNA206112	206112	FCB group	Bacteroidetes/Chlorobi group	5.77431	43.5	-	JGCN01	250	5228	4774	3/20/14	4/18/17	Contig	IGS	SAMN02314526	GCA_000598285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/285/GCA_000598285.1_ASM59828v1	-	2-F-2 #5
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.74579	50.7	-	CXMR01	383	5348	4559	7/17/15	2/24/17	Contig	SC	SAMEA2057990	GCA_001250135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/135/GCA_001250135.1_9870_6_24	-	143563
Streptococcus pyogenes	1314	PRJDB1740	313352	Terrabacteria group	Firmicutes	1.89382	38.5	chromosome 1:AP014596.1	-	1	1998	1926	2/26/16	2/26/16	Complete Genome	National Center for Global Health and Medicine	SAMD00000355	GCA_002355175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/175/GCA_002355175.1_ASM235517v1	-	M3-b
Bacillus licheniformis	1402	PRJNA321941	321941	Terrabacteria group	Firmicutes	4.12955	46.2	-	LYUH01	17	4266	4086	6/15/16	4/5/17	Contig	Microbial Institue for Fermentation Industry	SAMN05162511	GCA_001662975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/975/GCA_001662975.1_ASM166297v1	-	SRCM100115
Vibrio vulnificus	672	PRJNA264980	264980	Proteobacteria	Gammaproteobacteria	4.91281	46.7	-	JSWO01	144	4622	4089	12/2/14	4/11/17	Contig	Northwestern University	SAMN03160383	GCA_000788335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/335/GCA_000788335.1_ASM78833v1	25593245	ATL 6-1306
Pseudomonas syringae BRIP34876	1204471	PRJNA169408	169408	Proteobacteria	Gammaproteobacteria	6.01523	58.9	-	AMXK01	99	5307	5057	1/4/13	5/19/17	Scaffold	CSIRO	SAMN02469653	GCA_000334035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/035/GCA_000334035.1_34876_v2.0	23661484	BRIP34876
Streptococcus suis 89/1591	286604	PRJNA12417	12417	Terrabacteria group	Firmicutes	2.14325	41.1	-	AAFA03	82	2204	1971	7/23/04	3/15/17	Contig	DOE Joint Genome Institute	SAMN02441756	GCA_000167375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/375/GCA_000167375.1_ASM16737v1	-	89/1591
Streptococcus pyogenes	1314	PRJNA231221	231221	Terrabacteria group	Firmicutes	1.83964	38.5	chromosome:NZ_CP014027.1/CP014027.1	-	1	1889	1749	2/11/16	3/27/17	Complete Genome	US Food and Drug Administration 	SAMN03996295	GCA_001559175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/175/GCA_001559175.1_ASM155917v1	-	FDAARGOS_149
Streptococcus pyogenes	1314	PRJNA308988	308988	Terrabacteria group	Firmicutes	1.81445	38.5	chromosome:CP014138.1	-	1	1767	1554	1/25/16	4/7/16	Complete Genome	University of Michigan	SAMN04419118	GCA_001535505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/505/GCA_001535505.1_ASM153550v1	-	MEW427
Streptococcus pyogenes	1314	PRJNA289181	289181	Terrabacteria group	Firmicutes	1.94341	38.5	chromosome:NZ_CP012045.1/CP012045.1	-	1	2013	1875	7/9/15	3/26/17	Complete Genome	University of Queensland	SAMN03846812	GCA_001051095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/095/GCA_001051095.1_ASM105109v1	-	HKU488
Bifidobacterium longum subsp. longum 1-6B	1161744	PRJNA89647	89647	Terrabacteria group	Actinobacteria	2.68677	59.6	-	AJTF01	171	2456	2236	5/4/12	3/30/17	Contig	JCVI	SAMN00829154	GCA_000261245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/245/GCA_000261245.1_Blongum16Bv1.0	23682142	1-6B
Fusobacterium nucleatum subsp. nucleatum ATCC 23726	525283	PRJNA31471	31471	Fusobacteria	Fusobacteriia	2.23703	27	-	ADVK01	67	2128	1971	5/17/10	3/30/17	Contig	BCM	SAMN00001497	GCA_000178895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/895/GCA_000178895.1_ASM17889v1	-	ATCC 23726
Agrobacterium tumefaciens	358	PRJNA319063	319063	Proteobacteria	Alphaproteobacteria	6.0031	58.4	-	LXKV01	38	5781	5551	7/22/16	4/5/17	Scaffold	Oregon State University	SAMN04901301	GCA_001692265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/265/GCA_001692265.1_ASM169226v1	27547538	15-1187-1-2a
Shigella flexneri 1485-80	766155	PRJNA49091	49091	Proteobacteria	Gammaproteobacteria	4.68014	51.1	-	AMGB01	82	5201	4182	9/12/12	8/8/17	Contig	Institute for Genome Sciences	SAMN00017661	GCA_000296305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/305/GCA_000296305.1_ASM29630v1	-	1485-80
Streptococcus pyogenes	1314	PRJNA252999	252999	Terrabacteria group	Firmicutes	1.82952	38.5	chromosome:NZ_CP008776.1/CP008776.1	-	1	1873	1749	6/8/15	3/26/17	Complete Genome	Helmholtz Centre for Infection Research	SAMN02866032	GCA_001021955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/955/GCA_001021955.1_ASM102195v1	-	5448
Pseudomonas putida S12	1215087	PRJNA171340	171340	Proteobacteria	Gammaproteobacteria	6.28466	61.5	-	ALNR01	258	5908	5695	8/15/12	5/19/17	Contig	Shanghai Jiao Tong University	SAMN02470946	GCA_000287915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/915/GCA_000287915.1_ASM28791v1	23045497	S12
Xylella fastidiosa	2371	PRJNA257008	257008	Proteobacteria	Gammaproteobacteria	2.70214	52.5105	plasmid pXF-BHR.CVC0256:NZ_CM003748.1/CM003748.1; plasmid pXF-P1.CVC0256:NZ_CM003749.1/CM003749.1; plasmid pXF-P4.CVC0256:NZ_CM003750.1/CM003750.1; plasmid pXF-PS.CVC0256:NZ_CM003751.1/CM003751.1	LRVF01	128	2690	2335	2/5/16	4/4/17	Contig	µFORGE	SAMN03862121	GCA_001549745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/745/GCA_001549745.1_XFAS002-SEQ-2-ASM-1	-	CVC0256
Leptospira interrogans str. 2002000623	1049930	PRJNA74043	74043	Spirochaetes	Spirochaetia	4.92855	35.2	-	AHMG02	73	4495	4030	1/24/12	5/18/17	Contig	J. Craig Venter Institute	SAMN02436506	GCA_000243555.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/555/GCA_000243555.3_Lint2002000623v2.0	-	2002000623
Streptococcus pyogenes	1314	PRJNA243328	243328	Terrabacteria group	Firmicutes	1.91555	38.5	chromosome:NZ_CP007560.1/CP007560.1	-	1	1984	1849	6/3/15	3/26/17	Complete Genome	Public Health Ontario	SAMN02715744	GCA_001019635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/635/GCA_001019635.1_ASM101963v1	-	NGAS743
Streptococcus pyogenes	1314	PRJNA243328	243328	Terrabacteria group	Firmicutes	1.79131	38.5	chromosome:NZ_CP007561.1/CP007561.1	-	1	1800	1657	6/3/15	3/26/17	Complete Genome	Public Health Ontario	SAMN02715758	GCA_001019675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/675/GCA_001019675.1_ASM101967v1	-	NGAS596
Streptococcus pyogenes	1314	PRJNA242701	242701	Terrabacteria group	Firmicutes	1.90829	38.5	chromosome:NZ_CP007537.1/CP007537.1	-	1	1988	1860	5/7/15	3/26/17	Complete Genome	COMBACTE	SAMN02716635	GCA_000993765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/993/765/GCA_000993765.1_ASM99376v1	-	AP1
Streptococcus pyogenes	1314	PRJEB6403	251923	Terrabacteria group	Firmicutes	1.91486	38.5	chromosome 1:NZ_LN831034.1/LN831034.1	-	1	2007	1866	3/22/15	3/23/17	Complete Genome	SC	SAMEA2479569	GCA_002055535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/535/GCA_002055535.1_NCTC8198	-	NCTC8198
Streptococcus pyogenes	1314	PRJDB1668	276524	Terrabacteria group	Firmicutes	1.74483	38.5	chromosome Unknown:NZ_AP014585.1/AP014585.1	-	1	1785	1624	2/24/15	4/10/17	Complete Genome	Kitasato Institute of Life Sciences	SAMD00000332	GCA_001547835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/835/GCA_001547835.1_ASM154783v1	25883280	MTB314
Streptococcus pyogenes	1314	PRJDB1654	276523	Terrabacteria group	Firmicutes	1.74533	38.5	chromosome Unknown:AP014572.1	-	1	1843	1758	2/24/15	6/4/15	Complete Genome	Kitasato Institute of Life Sciences	SAMD00000328	GCA_001547815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/815/GCA_001547815.1_ASM154781v1	-	MTB313
Haemophilus influenzae 60294N1	1424333	PRJNA228952	228952	Proteobacteria	Gammaproteobacteria	1.81736	38	-	JXCI01	19	1819	1682	1/15/15	3/25/17	Contig	Menzies School of Health Research	SAMN03265433	GCA_000818925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/925/GCA_000818925.1_ASM81892v1	24285816	60294N1
Prochlorococcus marinus str. SS2	167552	PRJNA246696	246696	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.75277	36.4	-	JNAY01	19	1936	1866	9/29/14	4/2/17	Contig	MIT	SAMN02769569	GCA_000760255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/255/GCA_000760255.1_ASM76025v1	25977791	SS2
Mycobacterium bovis AN5	1389959	PRJNA214551	214551	Terrabacteria group	Actinobacteria	4.32567	65.6	-	AWPL01	70	4245	4013	10/30/13	4/2/17	Contig	South American Mycobacterium bovis WGS	SAMN02318534	GCA_000488935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/935/GCA_000488935.1_MBAN5v1	24699964	AN5
Mycobacterium avium subsp. paratuberculosis Pt155	1029820	PRJNA66651	66651	Terrabacteria group	Actinobacteria	4.56078	69	-	AFPH01	957	4673	3930	6/13/11	5/19/17	Contig	The Commonwealth Scientific and Industrial Research Organisation (CSIRO)	SAMN00222098	GCA_000218135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/135/GCA_000218135.2_ASM21813v2	-	Pt155
Clostridium perfringens	1502	PRJNA327317	327317	Terrabacteria group	Firmicutes	3.62403	28	-	MARE01	47	3340	3174	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323880	GCA_001949245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/245/GCA_001949245.1_ASM194924v1	28062388	JFP727
Xanthomonas campestris pv. campestris str. CFBP 4956	1358024	PRJEB4860	359558	Proteobacteria	Gammaproteobacteria	4.96588	65.1	-	CBVG01	2	4392	4089	12/31/16	4/6/17	Scaffold	Genoscope CEA	SAMEA3158498	GCA_900039355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/355/GCA_900039355.1_20120321	-	CFBP4956
Streptococcus pyogenes	1314	PRJNA257934	257934	Terrabacteria group	Firmicutes	1.94454	38.5	chromosome:NZ_CP009612.1/CP009612.1	-	1	1986	1858	11/5/14	3/24/17	Complete Genome	University of Queensland	SAMN02980885	GCA_000772185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/185/GCA_000772185.1_ASM77218v1	-	HKU360
Streptococcus pyogenes	1314	PRJNA238987	238987	Terrabacteria group	Firmicutes	1.79615	38.5	chromosome:NZ_CP007241.1/CP007241.1	-	1	1806	1662	11/5/14	3/24/17	Complete Genome	University Rennes1	SAMN02649402	GCA_000772245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/245/GCA_000772245.1_ASM77224v1	-	1.00E+01
Staphylococcus epidermidis VCU081	904326	PRJNA53735	53735	Terrabacteria group	Firmicutes	2.38	31.9	-	AHLU01	78	2327	2232	2/1/12	3/23/17	Contig	J. Craig Venter Institute	SAMN00117450	GCA_000245695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/695/GCA_000245695.2_ASM24569v2	-	VCU081
Streptococcus pyogenes	1314	PRJNA244349	244349	Terrabacteria group	Firmicutes	1.8448	38.5	chromosome:NZ_CP008926.1/CP008926.1	-	1	1909	1750	8/22/14	3/24/17	Complete Genome	Los Alamos National Laboratory	SAMN02905033	GCA_000743015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/015/GCA_000743015.1_ASM74301v1	25258274	ATCC 19615
Streptococcus pyogenes STAB902	1437007	PRJNA231895	231895	Terrabacteria group	Firmicutes	1.89212	38.5	chromosome:NZ_CP007041.1/CP007041.1	-	1	1974	1846	7/22/14	3/24/17	Complete Genome	nicolas.soriano@univ-rennes1.fr	SAMN03081524	GCA_000732425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/425/GCA_000732425.1_ASM73242v1	-	STAB902
Pseudomonas fluorescens BRIP34879	1205750	PRJNA169520	169520	Proteobacteria	Gammaproteobacteria	5.52529	60.8	-	AMZW01	110	4981	4767	1/4/13	5/19/17	Scaffold	CSIRO	SAMN02469655	GCA_000334015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/015/GCA_000334015.1_BRIP34879v2.0	23661484	BRIP34879
Streptococcus pyogenes STAB901	1440772	PRJNA232121	232121	Terrabacteria group	Firmicutes	1.79561	38.5	chromosome:CP007024.1	-	1	1812	1358	7/22/14	10/1/14	Complete Genome	"Bacteriology Service, CHU Pontchaillou Rennes, France"	SAMN03081523	GCA_000732385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/385/GCA_000732385.1_ASM73238v1	-	STAB901
Streptococcus pyogenes HSC5	1336746	PRJNA205050	205050	Terrabacteria group	Firmicutes	1.81835	38.5	chromosome:NC_021807.1/CP006366.1	-	1	1871	1735	7/11/13	3/24/17	Complete Genome	Washington University in St Louis	SAMN02604317	GCA_000422045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/045/GCA_000422045.1_ASM42204v1	23950122	HSC5
Streptococcus pyogenes A20	1235829	PRJNA175952	175952	Terrabacteria group	Firmicutes	1.83728	38.5	chromosome:NC_018936.1/CP003901.1	-	1	1894	1756	10/22/12	3/23/17	Complete Genome	National Cheng Kung University	SAMN02603640	GCA_000307535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/535/GCA_000307535.1_ASM30753v1	-	A20
Streptococcus pyogenes M1 476	1207470	PRJDB141	170670	Terrabacteria group	Firmicutes	1.83113	38.5	chromosome 1:NC_020540.2/AP012491.2	-	1	1880	1755	7/14/12	3/24/17	Complete Genome	National Center for Global Health and Medicine	SAMD00061013	GCA_000349925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/925/GCA_000349925.2_ASM34992v2	22965090	M1 476
Streptococcus pyogenes MGAS15252	798300	PRJNA49669	49669	Terrabacteria group	Firmicutes	1.75083	38.5	chromosome:NC_017040.1/CP003116.1	-	1	1751	1627	3/1/12	3/22/17	Complete Genome	The Methodist Hospital Research Institute	SAMN02603944	GCA_000250905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/905/GCA_000250905.1_ASM25090v1	22330677	MGAS15252
Streptococcus pyogenes MGAS1882	1010840	PRJNA66081	66081	Terrabacteria group	Firmicutes	1.78103	38.5	chromosome:NC_017053.1/CP003121.1	-	1	1787	1662	3/1/12	3/22/17	Complete Genome	The Methodist Hospital Research Institute	SAMN02603945	GCA_000250925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/925/GCA_000250925.1_ASM25092v1	-	MGAS1882
Pseudomonas fluorescens Pf29Arp	1262454	PRJNA182080	182080	Proteobacteria	Gammaproteobacteria	6.1318	60.9	-	ANOR01	69	5641	5349	3/15/13	5/19/17	Scaffold	INRA	SAMN02469932	GCA_000346775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/775/GCA_000346775.1_Pf29Arp_v1	23754720	Pf29Arp
Legionella pneumophila str. Corby	400673	PRJNA17491	17491	Proteobacteria	Gammaproteobacteria	3.57647	38.5	chromosome:NC_009494.2/CP000675.2	-	1	3276	3118	5/24/07	3/22/17	Complete Genome	"Fritz Lipmann Institute (former Institute of Molecular Biotechnology, IMB)"	SAMN02603241	GCA_000092545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/545/GCA_000092545.1_ASM9254v1	17888731	Corby
Streptococcus pyogenes MGAS9429	370551	PRJNA16363	16363	Terrabacteria group	Firmicutes	1.83647	38.5	chromosome:NC_008021.1/CP000259.1	-	1	1867	1724	5/4/06	3/22/17	Complete Genome	Lab of Human Bacterial Pathogenesis	SAMN02603501	GCA_000013485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/485/GCA_000013485.1_ASM1348v1	16636287	MGAS9429
Staphylococcus epidermidis VCU117	904335	PRJNA53753	53753	Terrabacteria group	Firmicutes	2.44822	32	-	AHLA01	90	2410	2283	2/7/12	3/23/17	Contig	J. Craig Venter Institute	SAMN00116890	GCA_000247025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/025/GCA_000247025.2_ASM24702v2	-	VCU117
Streptococcus pyogenes MGAS5005	293653	PRJNA13888	13888	Terrabacteria group	Firmicutes	1.83856	38.5	chromosome:NC_007297.2/CP000017.2	-	1	1896	1760	8/5/05	3/22/17	Complete Genome	Lab of Human Bacterial Pathogenesis	SAMN02603500	GCA_000011765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/765/GCA_000011765.2_ASM1176v2	"1,608,882,624,733,890"	MGAS5005
Streptococcus pyogenes MGAS8232	186103	PRJNA286	286	Terrabacteria group	Firmicutes	1.89502	38.5	chromosome:NC_003485.1/AE009949.1	-	1	1986	1847	1/31/02	3/22/17	Complete Genome	Lab of Human Bacterial Pathogenesis	SAMN02603495	GCA_000007285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/285/GCA_000007285.1_ASM728v1	11917108	MGAS8232
Xanthomonas campestris pv. campestris str. CFBP 1119	1358022	PRJEB4858	359556	Proteobacteria	Gammaproteobacteria	5.00884	65.1	-	CBVE01	2	4481	4169	12/31/16	4/6/17	Scaffold	Genoscope CEA	SAMEA3158472	GCA_900044145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/145/GCA_900044145.1_20120320	-	CFBP1119
Clostridium perfringens	1502	PRJNA327404	327404	Terrabacteria group	Firmicutes	3.57891	28	-	MARI01	67	3286	3123	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323884	GCA_001949295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/295/GCA_001949295.1_ASM194929v1	28062388	JFP795
Mycobacterium avium subsp. paratuberculosis Pt164	1029821	PRJNA66653	66653	Terrabacteria group	Actinobacteria	4.66971	69.2	-	AFPI01	592	4687	4090	6/13/11	5/19/17	Contig	The Commonwealth Scientific and Industrial Research Organisation (CSIRO)	SAMN00222099	GCA_000218155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/155/GCA_000218155.2_ASM21815v2	-	Pt164
Mycobacterium bovis BCG	33892	PRJNA247465	247465	Terrabacteria group	Actinobacteria	4.33313	65.6	-	JNAF01	62	4223	4004	6/12/14	4/2/17	Contig	"Sorbonne Universites, UPMC Univ Paris 06"	SAMN02777350	GCA_000705655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/655/GCA_000705655.1_ASM70565v1	-	BCG
Prochlorococcus marinus str. SS35	167553	PRJNA246696	246696	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.75101	36.4	-	JNAZ01	9	1925	1866	9/29/14	4/2/17	Contig	MIT	SAMN02769570	GCA_000760275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/275/GCA_000760275.1_ASM76027v1	25977791	SS35
Haemophilus influenzae	727	PRJNA272685	272685	Proteobacteria	Gammaproteobacteria	1.9356	38.1	-	JXMH01	35	1987	1818	2/9/15	3/25/17	Contig	Novartis Vaccines	SAMN03284981	GCA_000833735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/735/GCA_000833735.1_ASM83373v1	25814593	RMHi93
Streptococcus pyogenes M1 GAS	160490	PRJNA269	269	Terrabacteria group	Firmicutes	1.85243	38.5	chromosome:NC_002737.2/AE004092.2	-	1	1801	1693	4/10/01	8/3/16	Complete Genome	Univ. Oklahoma	SAMN02604089	GCA_000006785.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/006/785/GCA_000006785.2_ASM678v2	"1,129,629,624,733,890"	SF370
Methanobacterium congolense	118062	PRJEB14599	342286	Euryarchaeota	Methanobacteria	2.46957	38.4824	chromosome I:NZ_LT607756.1/LT607756.1; plasmid II:NZ_LT607757.1/LT607757.1	-	2	2359	2284	9/8/16	4/17/17	Complete Genome	CEBITEC	SAMEA4378819	GCA_900095295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/295/GCA_900095295.1_MCBB	-	-
Aliivibrio wodanis	80852	PRJEB6963	262768	Proteobacteria	Gammaproteobacteria	4.63513	38.4801	chromosome 1:NZ_LN554846.1/LN554846.1; chromosome 2:NZ_LN554847.1/LN554847.1; plasmid pAWOD150:NZ_LN554849.1/LN554849.1; plasmid pAWOD19:NZ_LN554851.1/LN554851.1; plasmid pAWOD72:NZ_LN554850.1/LN554850.1; plasmid pAWOD920:NZ_LN554848.1/LN554848.1	-	6	4232	3981	9/30/14	4/3/17	Complete Genome	University of Tromso	SAMEA2735904	GCA_000953695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/695/GCA_000953695.1_AWOD1	-	-
Enterococcus faecium T110	1344042	PRJNA207757	207757	Terrabacteria group	Firmicutes	2.73796	38.4565	chromosome:NZ_CP006030.1/CP006030.1; plasmid pEFT110:NZ_CP006031.1/CP006031.1	-	2	2764	2551	8/4/14	3/24/17	Complete Genome	SRM University	SAMN02194078	GCA_000737555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/555/GCA_000737555.1_ASM73755v1	-	T110
Helicobacter pylori SouthAfrica7	907239	PRJNA53319	53319	Proteobacteria	delta/epsilon subdivisions	1.67983	38.4259	chromosome:NC_017361.1/CP002336.1; plasmid unnamed:NC_017373.1/CP002337.1	-	2	1619	1461	1/6/11	3/22/17	Complete Genome	"Berg lab, Washington University Medical Shool"	SAMN02603025	GCA_000185245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/245/GCA_000185245.1_ASM18524v1	24072860	SouthAfrica7
Pediococcus damnosus	51663	PRJNA290141	290141	Terrabacteria group	Firmicutes	2.40469	38.4235	chromosome:NZ_CP012275.1/CP012275.1; plasmid pL21533-1:NZ_CP012276.1/CP012276.1; plasmid pL21533-2:NZ_CP012277.1/CP012277.1; plasmid pL21533-3:NZ_CP012278.1/CP012278.1; plasmid pL21533-4:NZ_CP012279.1/CP012279.1; plasmid pL21533-5:NZ_CP012280.1/CP012280.1; plasmid pL21533-6:NZ_CP012281.1/CP012281.1; plasmid pL21533-7:NZ_CP012282.1/CP012282.1	-	8	2319	2153	4/5/16	4/5/17	Complete Genome	Technische Universitaet Muenchen	SAMN03876482	GCA_001611075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/075/GCA_001611075.1_ASM161107v1	27028007	TMW 2.1533
Leptospira interrogans serovar Pomona str. Kennewicki LC82-25	1049924	PRJNA74051	74051	Spirochaetes	Spirochaetia	4.60833	35	-	AHMK02	71	4182	3681	1/24/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436433	GCA_000243635.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/635/GCA_000243635.3_gls454045v1.0	-	Kennewicki LC82-25
Xylella fastidiosa	2371	PRJNA257008	257008	Proteobacteria	Gammaproteobacteria	2.55541	51.919	plasmid pXF-P1.OLS0478:NZ_CM003752.1/CM003752.1; plasmid pXF-P4.OLS0478:NZ_CM003753.1/CM003753.1	LRVI01	48	2471	2172	2/5/16	4/4/17	Contig	µFORGE	SAMN03862124	GCA_001549755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/755/GCA_001549755.1_XFAS005-SEQ-1-ASM-1	-	OLS0478
Pseudomonas putida LS46	1193146	PRJNA167222	167222	Proteobacteria	Gammaproteobacteria	5.87476	61.7	-	ALPV02	32	5445	5200	8/31/12	5/19/17	Contig	"University of Manitoba,"	SAMN02471870	GCA_000294445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/445/GCA_000294445.2_ASM29444v2	"2,280,468,123,599,290"	LS46
Legionella pneumophila subsp. pneumophila	91891	PRJNA337897	337897	Proteobacteria	Gammaproteobacteria	3.4318	38.402	chromosome:NZ_CP016868.1/CP016868.1; plasmid unnamed:NZ_CP016869.1/CP016869.1	-	2	3092	2915	10/14/16	3/28/17	Complete Genome	Norwegian Defence Research Establishment (FFI)	SAMN05513576	GCA_001766275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/275/GCA_001766275.1_ASM176627v1	-	FFI102
Shigella flexneri	623	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.80581	50.6	-	JTBI01	2	5236	4264	11/14/14	8/4/17	Contig	US Food and Drug Administration 	SAMN02934526	GCA_000783735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/735/GCA_000783735.1_ASM78373v1	-	FDAARGOS_74
Agrobacterium tumefaciens	358	PRJNA319063	319063	Proteobacteria	Alphaproteobacteria	6.00394	58.4	-	LXKW01	38	5782	5552	7/22/16	4/5/17	Scaffold	Oregon State University	SAMN04901302	GCA_001692365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/365/GCA_001692365.1_ASM169236v1	-	15-1187-1-2b
Fusobacterium nucleatum subsp. polymorphum F0401	693991	PRJNA41987	41987	Fusobacteria	Fusobacteriia	2.51403	27	-	ADDB02	2	2494	2330	11/2/11	4/2/17	Contig	Broad Institute	SAMN02463835	GCA_000234075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/075/GCA_000234075.2_Fuso_nucl_F0401_V2	-	F0401
Bifidobacterium longum subsp. longum 44B	1161743	PRJNA89645	89645	Terrabacteria group	Actinobacteria	2.55922	59.7	-	AJTM01	62	2337	2155	5/4/12	3/30/17	Contig	JCVI	SAMN00829148	GCA_000261265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/265/GCA_000261265.1_Blongum44Bv1.0	23682142	44B
Legionella pneumophila subsp. pneumophila	91891	PRJNA337897	337897	Proteobacteria	Gammaproteobacteria	3.43176	38.402	chromosome:NZ_CP016870.1/CP016870.1; plasmid unnamed:NZ_CP016871.1/CP016871.1	-	2	3093	2890	10/14/16	3/28/17	Complete Genome	Norwegian Defence Research Establishment (FFI)	SAMN05513577	GCA_001766295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/295/GCA_001766295.1_ASM176629v1	-	FFI103
Legionella pneumophila subsp. pneumophila	91891	PRJNA337897	337897	Proteobacteria	Gammaproteobacteria	3.4318	38.402	chromosome:NZ_CP016874.1/CP016874.1; plasmid unnamed:NZ_CP016875.1/CP016875.1	-	2	3094	2920	10/14/16	3/28/17	Complete Genome	Norwegian Defence Research Establishment (FFI)	SAMN05513580	GCA_001766355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/355/GCA_001766355.1_ASM176635v1	-	FFI329
Legionella pneumophila subsp. fraseri	91892	PRJNA344070	344070	Proteobacteria	Gammaproteobacteria	3.51538	38.4	chromosome:NZ_CP017457.1/CP017457.1	-	1	3187	3018	11/28/16	3/28/17	Complete Genome	Centers of Disease Control	SAMN05818658	GCA_001886795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/795/GCA_001886795.1_ASM188679v1	-	Detroit-1
Streptococcus suis R61	996306	PRJNA63545	63545	Terrabacteria group	Firmicutes	2.39091	41.2	-	AEYY01	53	2434	2179	10/21/11	3/15/17	Contig	Huazhong Agricultural University	SAMN02469902	GCA_000231325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/325/GCA_000231325.2_ASM23132v2	-	R61
Pseudomonas syringae BRIP34881	1205751	PRJNA169521	169521	Proteobacteria	Gammaproteobacteria	6.01707	58.9	-	AMXL01	96	5324	5061	1/4/13	5/19/17	Scaffold	CSIRO	SAMN02469652	GCA_000334055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/055/GCA_000334055.1_34881_v2.0	23661484	BRIP34881
Vibrio vulnificus	672	PRJNA264979	264979	Proteobacteria	Gammaproteobacteria	4.8393	46.7	-	JSWP01	126	4491	4054	12/2/14	4/2/17	Contig	Northwestern University	SAMN03160384	GCA_000788345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/345/GCA_000788345.1_ASM78834v1	25593245	ATL 71503
Bacillus licheniformis	1402	PRJNA316783	316783	Terrabacteria group	Firmicutes	4.44545	45.6	-	LWKC01	228	4722	4444	11/10/16	4/5/17	Contig	CSIR-Institute of Microbial Technology	SAMN04590050	GCA_001876545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/545/GCA_001876545.1_ASM187654v1	-	RE1.58
Legionella pneumophila	446	PRJEB17630	353190	Proteobacteria	Gammaproteobacteria	3.50959	38.4	chromosome 1:NZ_LT632615.1/LT632615.1	-	1	3214	3070	11/18/16	3/28/17	Complete Genome	WTSI	SAMEA4535097	GCA_900119755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/755/GCA_900119755.1_2531STDY5467379	-	ST23
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.73973	50.7	-	CXJN01	394	5358	4568	7/16/15	2/24/17	Contig	SC	SAMEA2004860	GCA_001250335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/335/GCA_001250335.1_8290_4_14	-	95234
Bacteroides fragilis str. 3774 T13	1339308	PRJNA206151	206151	FCB group	Bacteroidetes/Chlorobi group	5.42189	43.8	-	JGCR01	340	4945	4594	3/20/14	4/18/17	Contig	IGS	SAMN02314525	GCA_000598305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/305/GCA_000598305.1_ASM59830v1	-	3774 T13
Streptococcus thermophilus MTCC 5460	1073569	PRJNA71267	71267	Terrabacteria group	Firmicutes	1.60936	39.3	-	ALIK01	143	1756	1421	2/1/13	4/11/17	Contig	Anand Agricultural University	SAMN02470981	GCA_000335515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/515/GCA_000335515.1_ASM33551v1	-	MTCC 5460
Lactobacillus reuteri	1598	PRJNA342243	342243	Terrabacteria group	Firmicutes	2.12572	38.7	-	MIMJ01	169	2124	1958	5/11/17	5/22/17	Contig	Seoul National University	SAMN05751484	GCA_002128555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/555/GCA_002128555.1_ASM212855v1	-	KLR2002
Burkholderia cenocepacia	95486	PRJNA285410	285410	Proteobacteria	Betaproteobacteria	7.26132	67	-	LDWC01	1002	7109	6293	8/31/15	3/26/17	Contig	University of Queensland	SAMN03753648	GCA_001276275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/275/GCA_001276275.1_ASM127627v1	-	C14
Legionella pneumophila	446	PRJEB17630	353190	Proteobacteria	Gammaproteobacteria	3.53082	38.4	chromosome 1:NZ_LT632614.1/LT632614.1	-	1	3216	3070	11/18/16	3/28/17	Complete Genome	WTSI	SAMEA4535100	GCA_900119765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/765/GCA_900119765.1_2532STDY5467631	-	ST62
Legionella pneumophila	446	PRJEB17630	353190	Proteobacteria	Gammaproteobacteria	3.47464	38.4	chromosome 1:NZ_LT632616.1/LT632616.1	-	1	3164	3054	11/18/16	3/28/17	Complete Genome	WTSI	SAMEA4535098	GCA_900119775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/775/GCA_900119775.1_2531STDY5467446	-	ST37
Bacillus pumilus	1408	PRJNA277414	277414	Terrabacteria group	Firmicutes	3.67004	41.6	-	LDWK01	28	3754	3644	6/24/15	4/3/17	Contig	University of Malaya	SAMN03751780	GCA_001038905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/905/GCA_001038905.1_ASM103890v1	-	LK21
Corynebacterium glutamicum	1718	PRJNA305673	305673	Terrabacteria group	Actinobacteria	3.10931	54.2	-	LOQS01	38	2945	2774	12/21/16	5/1/17	Contig	Shanghai Institutes for Biological Sciences (SIBS) of Chinese Academy of Sciences (CAS)	SAMN04331502	GCA_001912725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/725/GCA_001912725.1_ASM191272v1	28198668	AS 1.299
Burkholderia mallei	13373	PRJNA238918	238918	Proteobacteria	Betaproteobacteria	5.66195	68.5042	chromosome 1:NZ_CP009942.1/CP009942.1; chromosome 2:NZ_CP009943.1/CP009943.1	-	2	6066	5661	3/20/15	4/3/17	Chromosome	Los Alamos National Laboratory	SAMN03198318	GCA_000959585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/585/GCA_000959585.1_ASM95958v1	25931592	KC_1092
Legionella pneumophila	446	PRJEB17630	353190	Proteobacteria	Gammaproteobacteria	3.43056	38.4	chromosome 1:NZ_LT632617.1/LT632617.1	-	1	3101	2966	11/18/16	3/28/17	Complete Genome	WTSI	SAMEA4535099	GCA_900119785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/785/GCA_900119785.1_2531STDY5467415	-	ST42
Ralstonia solanacearum	305	PRJEB7434	268820	Proteobacteria	Betaproteobacteria	5.74427	66.4	-	CDLX01	1	5382	4755	1/5/15	4/3/17	Scaffold	CIRAD	SAMEA3137588	GCA_000825925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/925/GCA_000825925.2_CFBP1416	-	CFBP1416
Candidatus Pelagibacter ubique	198252	PRJEB9287	287342	Proteobacteria	Alphaproteobacteria	0.611592	29.5	-	CVSR01	94	-	-	6/17/15	6/17/15	Contig	UNIVERSITY OF CALIFORNIA - SAN DIEGO	SAMEA3368568	GCA_001180145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/145/GCA_001180145.1_CLC_assembled_contigs	-	SCGC AAA795-N17
Legionella pneumophila subsp. pneumophila	91891	PRJNA337897	337897	Proteobacteria	Gammaproteobacteria	3.36249	38.4	chromosome:NZ_CP016872.1/CP016872.1	-	1	3064	2889	10/14/16	3/28/17	Complete Genome	Norwegian Defence Research Establishment (FFI)	SAMN05513578	GCA_001766315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/315/GCA_001766315.1_ASM176631v1	-	FFI104
Clostridioides difficile T6	1215074	PRJEB204	222751	Terrabacteria group	Firmicutes	4.30794	28.4	-	CAMR01	373	4019	3868	10/14/13	3/16/17	Scaffold	LPBA	SAMEA3138884	GCA_000530415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/415/GCA_000530415.1_T6	24482682	T6
Shigella boydii	621	PRJNA288163	288163	Proteobacteria	Gammaproteobacteria	4.3862	50.7	-	LPTS01	473	5073	4178	12/15/16	2/26/17	Contig	"University of Maryland, School of Medicine"	SAMN04001688	GCA_001906145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/145/GCA_001906145.1_ASM190614v1	-	600375
Streptococcus salivarius	1304	PRJNA320256	320256	Terrabacteria group	Firmicutes	2.33104	39.4	-	LXIJ01	97	2206	2066	12/16/16	4/6/17	Contig	State University of Campinas	SAMN04933504	GCA_001906995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/995/GCA_001906995.1_ASM190699v1	-	37-09 S13
Legionella pneumophila subsp. pneumophila	91891	PRJNA337897	337897	Proteobacteria	Gammaproteobacteria	3.364	38.4	chromosome:NZ_CP016873.1/CP016873.1	-	1	3068	2890	10/14/16	3/28/17	Complete Genome	Norwegian Defence Research Establishment (FFI)	SAMN05513579	GCA_001766335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/335/GCA_001766335.1_ASM176633v1	-	FFI105
Brucella abortus	235	PRJNA400357	400357	Proteobacteria	Alphaproteobacteria	3.37328	56.9897	chromosome 1:NZ_CP023235.1/CP023235.1; chromosome 2:NZ_CP023236.1/CP023236.1	-	2	3383	2977	9/12/17	9/14/17	Chromosome	IZSM-Portici	SAMN07572693	GCA_002291285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/285/GCA_002291285.1_ASM229128v1	-	21630
Yersinia pseudotuberculosis	633	PRJEB5497	243338	Proteobacteria	Gammaproteobacteria	4.89474	47.4	-	CCBI01	128	4564	4281	4/1/14	4/2/17	Scaffold	UPSUD	SAMEA3138992	GCA_000613105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/105/GCA_000613105.1_CEB14_0017	-	CEB14_0017
Lactobacillus delbrueckii subsp. indicus DSM 15996	1423824	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.86357	49.6	-	AZFL01	139	1872	1601	11/6/15	4/4/17	Scaffold	Shanghai Majorbio	SAMN02369368	GCA_001435795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/795/GCA_001435795.1_ASM143579v1	26415554	DSM 15996
Leptospira borgpetersenii	174	PRJNA257146	257146	Spirochaetes	Spirochaetia	3.86013	40.1	-	JQQY01	178	3700	3413	2/24/16	4/5/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947893	GCA_001569145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/145/GCA_001569145.1_ASM156914v1	26833181	56664
Legionella pneumophila subsp. pneumophila	91891	PRJNA337897	337897	Proteobacteria	Gammaproteobacteria	3.36246	38.4	chromosome:NZ_CP016876.1/CP016876.1	-	1	3065	2882	10/14/16	3/28/17	Complete Genome	Norwegian Defence Research Establishment (FFI)	SAMN05513581	GCA_001766375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/375/GCA_001766375.1_ASM176637v1	-	FFI337
Campylobacter fetus subsp. testudinum	1507806	PRJNA285158	285158	Proteobacteria	delta/epsilon subdivisions	1.73536	33.1	-	LFXC01	79	1722	1655	8/5/16	4/5/17	Contig	Utrecht University	SAMN03741798	GCA_001699345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/345/GCA_001699345.1_ASM169934v1	27333878	85-387
Xanthomonas oryzae pv. oryzicola MAI10	1423890	PRJNA228927	228927	Proteobacteria	Gammaproteobacteria	4.41763	64	-	AYSY01	860	4269	3397	12/12/13	4/11/17	Contig	Colorado State University	SAMN02469641	GCA_000507025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/507/025/GCA_000507025.1_X._oryzae_pv._oryzicola_MAI10	24837384	MAI10
Oenococcus oeni IOEB_9803	1428419	PRJNA229544	229544	Terrabacteria group	Firmicutes	1.83391	37.8	-	AZKF01	36	1881	1711	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02902409	GCA_000761705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/705/GCA_000761705.1_Oeoe_IOEB_9803_1.0	24901216	IOEB_9803
Streptococcus mitis	28037	PRJNA242740	242740	Terrabacteria group	Firmicutes	1.95687	40.1	-	JPFS01	40	2000	1768	7/7/14	4/2/17	Contig	Aarhus University	SAMN02836934	GCA_000722835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/835/GCA_000722835.1_ASM72283v1	25053789	SK137
Aeromonas salmonicida subsp. salmonicida	29491	PRJNA264317	264317	Proteobacteria	Gammaproteobacteria	4.91513	58.4	-	MIIP01	215	4765	4106	12/13/16	4/6/17	Contig	Universite Laval	SAMN05728466	GCA_001902025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/025/GCA_001902025.1_ASM190202v1	-	m23067-09
Vibrio parahaemolyticus EKP-028	1238212	PRJNA176647	176647	Proteobacteria	Gammaproteobacteria	5.20156	45.2	-	JACH01	100	5355	4557	1/23/14	3/18/17	Scaffold	IGS	SAMN01923903	GCA_000522005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/005/GCA_000522005.2_vpEKP026	-	EKP-028
Legionella pneumophila	446	PRJNA323476	323476	Proteobacteria	Gammaproteobacteria	3.45733	38.4	chromosome:NZ_CP015932.1/CP015932.1	-	1	3142	3033	10/6/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05179547	GCA_001752845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/845/GCA_001752845.1_ASM175284v1	27684472	C1_S
Coxiella burnetii	777	PRJEB5843	249031	Proteobacteria	Gammaproteobacteria	2.00845	42.5	-	CCAI01	41	2252	1949	3/25/14	4/2/17	Contig	ANIMAL HEALTH AND VETERINARY LABORATORIES AGENCY	SAMEA3139024	GCA_000723305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/305/GCA_000723305.1_Cb-B18	-	Cb_B18
Lactobacillus casei	1582	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.09242	47.9	-	JUPZ01	200	2982	2784	7/10/15	4/3/17	Contig	University of Washington	SAMN03198075	GCA_001066695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/695/GCA_001066695.1_ASM106669v1	26230489	867_LCAS
Salinispora arenicola CNX482	1136426	PRJNA169837	169837	Terrabacteria group	Actinobacteria	5.71157	69.5	-	AZWD01	89	5229	4863	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597234	GCA_000514555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/555/GCA_000514555.1_ASM51455v1	-	CNX482
Vibrio harveyi	669	PRJNA302718	302718	Proteobacteria	Gammaproteobacteria	6.18416	45.5	-	LNRB01	106	5741	5420	2/10/16	4/4/17	Contig	University of Cambridge	SAMN04279316	GCA_001557945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/945/GCA_001557945.1_ASM155794v1	-	CUB2
Lactobacillus fermentum MTCC 8711	1366052	PRJNA212396	212396	Terrabacteria group	Firmicutes	2.5663	49.6491	plasmid pLF01:AVAB01000110.1; plasmid pLF02:AVAB01000111.1; plasmid pLF03:AVAB01000112.1; plasmid pLF04:AVAB01000113.1; plasmid pLF05:AVAB01000114.1; plasmid pLF06:AVAB01000115.1; plasmid pLF07:AVAB01000116.1	AVAB01	116	2683	2264	8/19/13	1/8/14	Contig	Madurai Kamaraj University	SAMN02470291	GCA_000477515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/515/GCA_000477515.1_Reference_Assembly	24072868	MTCC 8711
Streptococcus pyogenes	1314	PRJNA278400	278400	Terrabacteria group	Firmicutes	1.86249	38.4	chromosome:NZ_CP011069.1/CP011069.1	-	1	1890	1746	7/5/16	3/28/17	Complete Genome	Universite de Rennes 1	SAMN03418290	GCA_001678885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/885/GCA_001678885.1_ASM167888v1	-	STAB09014
Porphyromonas gingivalis	837	PRJEB10280	362716	FCB group	Bacteroidetes/Chlorobi group	2.22268	48.6	-	FUFF01	22	1973	1827	2/2/17	4/6/17	Scaffold	"Melbourne Dental School, University of Melbourne"	SAMEA3505349	GCA_900157265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/265/GCA_900157265.1_A7A1-28	-	A7A1_28
Aliivibrio fischeri JCM 18803	1298605	PRJDB881	243765	Proteobacteria	Gammaproteobacteria	4.30272	38.2	-	BBEE01	180	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016818	GCA_001312625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/625/GCA_001312625.1_ASM131262v1	-	JCM 18803
Clostridium botulinum	1491	PRJNA259757	259757	Terrabacteria group	Firmicutes	3.87108	27.3	-	JQOK01	128	3547	3364	9/8/14	3/24/17	Scaffold	Bureau of Food Surveillance and Science Integration	SAMN03012885	GCA_000750055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/055/GCA_000750055.1_ASM75005v1	25377702	KAPB-3
Burkholderia multivorans	87883	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.38516	67.4	-	LPJY01	62	6019	5759	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449604	GCA_001534105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/105/GCA_001534105.1_ASM153410v1	-	MSMB575WGS
Borrelia burgdorferi IPT92	1408876	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.23779	28.2	-	AYBZ01	182	1272	735	12/3/13	4/2/17	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378843	GCA_000502055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/055/GCA_000502055.1_BorBurgIPT92	-	IPT92
Treponema pallidum subsp. pallidum	161	PRJNA322283	322283	Spirochaetes	Spirochaetia	1.13893	52.8	chromosome:NZ_CP016054.1/CP016054.1	-	1	1065	950	8/25/16	4/10/17	Chromosome	"National Institute of Health, Portugal"	SAMN05150778	GCA_001713035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/035/GCA_001713035.1_ASM171303v1	-	PT_SIF1127
Rhizobium leguminosarum bv. trifolii SRDI943	935550	PRJNA89687	89687	Proteobacteria	Alphaproteobacteria	7.41239	60.7	-	AQUN01	5	7346	6992	4/19/13	5/19/17	Contig	JGI	SAMN02261326	GCA_000372105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/105/GCA_000372105.1_ASM37210v1	-	SRDI943
Clavibacter michiganensis	28447	PRJEB19757	377510	Terrabacteria group	Actinobacteria	3.29572	72.7	-	FVZG01	13	3099	2994	3/11/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06265879	GCA_900168345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/345/GCA_900168345.1_IMG-taxon_2708742539_annotated_assembly	-	VKM Ac-1403
Brucella suis F7/06-5	1169241	PRJNA173517	173517	Proteobacteria	Alphaproteobacteria	3.33308	57.2	-	AQLF01	3	3388	3132	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN00839714	GCA_000371265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/265/GCA_000371265.1_Bruc_suis_F7_06-5_V1	-	F7/06-5
Enterococcus faecalis TX0309A	749503	PRJNA47161	47161	Terrabacteria group	Firmicutes	3.11221	37.2	-	AEBN01	56	3243	3106	8/31/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189110	GCA_000147555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/555/GCA_000147555.1_ASM14755v1	-	TX0309A
Microcystis aeruginosa LE3	1194489	PRJNA340013	340013	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.55692	42.8	-	MTBS01	163	-	-	8/31/17	8/31/17	Scaffold	University of Michigan	SAMN05629279	GCA_002282945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/945/GCA_002282945.1_ASM228294v1	-	-
Borrelia garinii IPT101	1408837	PRJNA223339	223339	Spirochaetes	Spirochaetia	0.847411	28.1	-	AYAM01	713	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378804	GCA_000501115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/115/GCA_000501115.1_BorGarIPT101	-	IPT101
Streptococcus mutans TCI-169	1074137	PRJNA72023	72023	Terrabacteria group	Firmicutes	1.92777	36.7	-	AGKZ01	59	1934	1839	10/6/11	3/22/17	Contig	JCVI	SAMN02436349	GCA_000229165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/165/GCA_000229165.2_SMUT5-NEX_6-169	-	TCI-169
Neisseria gonorrhoeae	485	PRJNA400362	400362	Proteobacteria	Betaproteobacteria	2.22374	52.5	-	NTCU01	185	2730	2167	9/11/17	9/11/17	Scaffold	State Research Center of Dermatovenereology and Cosmetology (CNIKVI)	SAMN07566722	GCA_002289065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/065/GCA_002289065.1_ASM228906v1	-	19/15/005
Enterococcus faecium	1352	PRJNA292797	292797	Terrabacteria group	Firmicutes	3.16115	37.8036	chromosome:NZ_CP012454.1/CP012454.1; plasmid ISMMS_VRE5_p1:NZ_CP012455.1/CP012455.1; plasmid ISMMS_VRE5_p2:NZ_CP012458.1/CP012458.1; plasmid ISMMS_VRE5_p3:NZ_CP012456.1/CP012456.1; plasmid ISMMS_VRE5_p4:NZ_CP012457.1/CP012457.1; plasmid ISMMS_VRE5_p5:NZ_CP012459.1/CP012459.1	-	6	3289	3004	9/7/16	4/17/17	Chromosome	Mount Sinai School of Medicine	SAMN03988560	GCA_001721025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/025/GCA_001721025.1_ASM172102v1	28301471	ISMMS_VRE_5
Chlamydia psittaci 09DC80	1112271	PRJNA77115	77115	PVC group	Chlamydiae	1.19028	39.1	-	ATLB01	16	1067	982	6/25/13	4/1/17	Scaffold	University of Maryland School of Medicine	SAMN00860218	GCA_000415765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/765/GCA_000415765.1_ASM41576v1	-	09DC80
Bifidobacterium animalis subsp. animalis MCC 0499	1365956	PRJNA215970	215970	Terrabacteria group	Actinobacteria	2.13378	60.2	-	AWFN01	11	1876	1719	8/11/15	4/3/17	Scaffold	"Food Science and Technology Institute, Morinaga Milk Industry Co., Ltd"	SAMN03978809	GCA_001263865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/865/GCA_001263865.1_ASM126386v1	26236711	MCC 0499
Bacillus amyloliquefaciens EBL11	1457158	PRJNA236534	236534	Terrabacteria group	Firmicutes	3.92932	46.5	-	JCOC01	24	3874	3719	2/6/14	4/2/17	Contig	CSIRO Land and Water	SAMN02597787	GCA_000559145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/145/GCA_000559145.1_BacAmy_A3	25059875	EBL11
Stenotrophomonas maltophilia SeITE02	1407502	PRJEB4721	243334	Proteobacteria	Gammaproteobacteria	4.55711	66.4	-	CBXW01	63	4160	4026	4/1/14	3/24/17	Contig	BIOCAT	SAMEA3138997	GCA_000613205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/205/GCA_000613205.1_Stenotrophomonas_maltophilia_SeITE02	-	SeITE02
Yersinia frederiksenii	29484	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.94118	47.6	-	MWTJ01	247	4623	4095	6/14/17	6/14/17	Contig	SRCAMB	SAMN06344231	GCA_002192835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/835/GCA_002192835.1_ASM219283v1	-	SCPM-O-B-8031
Bifidobacterium bifidum	1681	PRJEB17194	351296	Terrabacteria group	Actinobacteria	2.1503	62.8	-	FOLU01	15	1835	1670	10/31/16	4/5/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216254	GCA_900112465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/465/GCA_900112465.1_IMG-taxon_2654588208_annotated_assembly	-	Calf96
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12648	41.2	-	CWBQ01	77	2054	1875	6/24/15	3/26/17	Contig	SC	SAMEA1032767	GCA_001175325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/325/GCA_001175325.1_6903_5_80	-	EQUI0129
[Haemophilus] parasuis	738	PRJNA301181	301181	Proteobacteria	Gammaproteobacteria	2.20956	39.9	-	MNAS01	171	2217	1997	1/6/17	4/6/17	Scaffold	Chinese Academy of Agricultural Sciences	SAMN04230883	GCA_001938255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/255/GCA_001938255.1_ASM193825v1	-	H47
Pasteurella multocida RIIF	1298928	PRJNA191139	191139	Proteobacteria	Gammaproteobacteria	2.19563	40.3	-	ARNZ01	243	2092	1967	6/18/13	4/1/17	Contig	Moredun Research Institute	SAMN02470562	GCA_000412105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/105/GCA_000412105.1_RIIF	-	RIIF
Lactobacillus rhamnosus E800	1457191	PRJNA236793	236793	Terrabacteria group	Firmicutes	3.03162	46.6	-	JDRW01	83	3110	2862	6/26/14	4/2/17	Contig	Helsinki University	SAMN02602919	GCA_000712495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/495/GCA_000712495.1_E800	25032833	E800
Clostridium sporogenes	1509	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.83011	27.3	-	DGFO01	229	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453098	GCA_002391715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/715/GCA_002391715.1_ASM239171v1	28894102	-
Brucella melitensis	29459	PRJNA338970	338970	Proteobacteria	Alphaproteobacteria	3.31278	57.1716	chromosome 1:NZ_CP016985.1/CP016985.1; chromosome 2:NZ_CP016986.1/CP016986.1	-	2	3380	3136	8/29/16	4/10/17	Chromosome	Viginia Tech University	SAMN05578252	GCA_001715465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/465/GCA_001715465.1_ASM171546v1	-	2010724553
Legionella pneumophila	446	PRJNA324244	324244	Proteobacteria	Gammaproteobacteria	3.545	38.4	chromosome:NZ_CP016029.2/CP016029.2	-	1	3234	3092	6/28/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05199028	GCA_001677115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/115/GCA_001677115.2_ASM167711v2	27563044	Pontiac
Bordetella bronchiseptica MBORD698	1331230	PRJNA202142	202142	Proteobacteria	Betaproteobacteria	5.15174	68.3	-	JGXQ01	52	4856	4748	5/12/14	4/2/17	Contig	JCVI	SAMN02231434	GCA_000689855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/855/GCA_000689855.1_gbb34v01	25908122	MBORD698
Sinorhizobium meliloti AK58	928722	PRJNA71315	71315	Proteobacteria	Alphaproteobacteria	6.97433	62	-	AXBM01	9	7048	6400	9/30/13	4/2/17	Scaffold	JGI	SAMN02440779	GCA_000473425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/425/GCA_000473425.1_ASM47342v1	-	AK58
Corynebacterium diphtheriae	1717	PRJNA339932	339932	Terrabacteria group	Actinobacteria	2.53902	53.5	-	MDYV01	49	2469	2196	9/12/16	4/21/17	Contig	"CMC, Vellore"	SAMN05615463	GCA_001723465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/465/GCA_001723465.1_ASM172346v1	-	TH510
[Haemophilus] ducreyi	730	PRJNA270894	270894	Proteobacteria	Gammaproteobacteria	1.5966	38.1	chromosome:CP011230.1	-	1	1539	1385	6/30/15	7/23/15	Chromosome	Indiana University School of Medicine	SAMN03271829	GCA_001043475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/475/GCA_001043475.1_ASM104347v1	-	GU8
Legionella pneumophila	446	PRJNA318217	318217	Proteobacteria	Gammaproteobacteria	3.4447	38.4	chromosome:NZ_CP015344.1/CP015344.1	-	1	3136	2997	5/26/16	3/28/17	Complete Genome	Pneumonia Response and Surveillance Laboratory (CDC)	SAMN04634513	GCA_001652685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/685/GCA_001652685.1_ASM165268v1	-	D-7630
Yersinia enterocolitica subsp. enterocolitica WA-314	1194086	PRJNA167372	167372	Proteobacteria	Gammaproteobacteria	4.52466	47.2	-	AKKR01	129	4290	4013	9/17/12	5/19/17	Contig	Max von Pettenkofer-Institut	SAMN02403951	GCA_000297175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/175/GCA_000297175.1_ASM29717v1	22963272	WA-314
Dehalococcoides mccartyi	61435	PRJNA320716	320716	Terrabacteria group	Chloroflexi	1.4716	46.8	-	LZFK01	16	1535	1475	7/1/16	7/1/16	Contig	Stanford University	SAMN05190593	GCA_001678035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/035/GCA_001678035.1_ASM167803v1	-	-
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.10248	41.7	-	JJPA01	267	3603	3342	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708982	GCA_000979495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/495/GCA_000979495.1_gtlEnvA5udCFS	25756680	3.F.A.1A.1
Anaplasma phagocytophilum	948	PRJEB13033	321622	Proteobacteria	Alphaproteobacteria	1.16875	41.8	-	FLMF02	300	1049	1022	6/2/16	10/5/16	Scaffold	INRA-MIG	SAMEA4018766	GCA_900088675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/675/GCA_900088675.2_ANAPH1_2	-	H1
Leuconostoc mesenteroides subsp. cremoris	33965	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.62752	38	-	MPED01	105	1753	1406	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981476	GCA_002092335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/335/GCA_002092335.1_ASM209233v1	28217118	LMGCF14
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.34673	39.5	-	FPIH01	401	1137	1021	5/10/17	5/24/17	Scaffold	WTSI	SAMEA893021	GCA_900118595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/595/GCA_900118595.1_4880_6_7	-	86/30
Serratia marcescens MC460	1333582	PRJNA203056	203056	Proteobacteria	Gammaproteobacteria	5.3712	59.1	-	ATOJ01	139	5217	4968	7/3/13	3/24/17	Scaffold	The Genome Institute	SAMN02436894	GCA_000418875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/875/GCA_000418875.1_S_marcescensMC460-1.0	-	MC460
Streptococcus pyogenes	1314	PRJNA317786	317786	Terrabacteria group	Firmicutes	1.76512	38.4	chromosome:NZ_CP015238.2/CP015238.2	-	1	1759	1631	5/6/16	3/28/17	Complete Genome	University of Notre Dame	SAMN04625972	GCA_001638845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/845/GCA_001638845.2_ASM163884v2	-	NS53
Mannheimia haemolytica	75985	PRJNA181191	181191	Proteobacteria	Gammaproteobacteria	2.57319	41.1	-	LFXZ01	128	2625	2423	3/23/16	4/5/17	Contig	Agriculture and Agri-Food Canada	SAMN03840564	GCA_001596635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/635/GCA_001596635.1_ASM159663v1	26926339	L033A
Lactobacillus brevis	1580	PRJEB17528	359565	Terrabacteria group	Firmicutes	2.69291	45.4	-	FPCL01	173	2800	2515	12/31/16	5/31/17	Contig	Microbiology and Fermentation	SAMEA4527921	GCA_900116975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/975/GCA_900116975.1_ASM90011697v1	-	-
Campylobacter coli 111-3	887280	PRJNA52697	52697	Proteobacteria	delta/epsilon subdivisions	1.70959	31.2	-	AIMI01	122	1769	1665	3/16/12	3/15/17	Contig	Cornell University	SAMN02428935	GCA_000253415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/415/GCA_000253415.2_ASM25341v2	23279811	111-3
Burkholderia sp. HMSC10F09	1581083	PRJNA269852	269852	Proteobacteria	Betaproteobacteria	6.13062	67.3	-	LWOO01	460	5991	5477	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03287022	GCA_001806955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/955/GCA_001806955.1_ASM180695v1	-	HMSC10F09
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.71524	67.2	-	LOWG01	99	6149	5850	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449227	GCA_001525685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/685/GCA_001525685.1_ASM152568v1	-	FL-2-1-10-S1-D0
Propionibacterium acnes HL110PA1	765077	PRJNA49187	49187	Terrabacteria group	Actinobacteria	2.49615	60.1	-	ADZE01	16	2511	2381	7/29/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189247	GCA_000144205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/205/GCA_000144205.1_ASM14420v1	-	HL110PA1
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.45384	32.7	-	CUDX01	80	2425	2296	3/31/15	3/26/17	Contig	SC	SAMEA1035143	GCA_001227625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/625/GCA_001227625.1_7067_4_65	-	51-44
Mycoplasma bovis	28903	PRJNA306895	306895	Terrabacteria group	Tenericutes	0.916337	29.3	-	LQFF01	69	795	702	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366553	GCA_001930655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/655/GCA_001930655.1_ASM193065v1	-	2969MB
Proteus mirabilis	584	PRJNA289042	289042	Proteobacteria	Gammaproteobacteria	4.19732	39.2	-	LGAY01	100	4042	3814	11/27/15	4/4/17	Contig	University of Siena	SAMN03840807	GCA_001448445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/445/GCA_001448445.1_ASM144844v1	26868393	NO-051/03
Enterobacter cloacae	550	PRJEB20432	382931	Proteobacteria	Gammaproteobacteria	4.77351	55.6	chromosome I:NZ_LT840187.1/LT840187.1	-	1	4586	4388	4/19/17	4/22/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04487932	GCA_900177445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/445/GCA_900177445.1_IMG-taxon_2608642260_annotated_assembly	-	DG6
Cronobacter sakazakii	28141	PRJNA283440	283440	Proteobacteria	Gammaproteobacteria	4.54745	56.9	-	LCWW01	142	4467	4202	10/9/15	4/4/17	Scaffold	"Nottingham Trent University, UK"	SAMN03650261	GCA_001309435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/435/GCA_001309435.1_ASM130943v1	26438044	701
Klebsiella oxytoca	571	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	6.2734	54.5	-	NPHT01	103	6276	5916	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07344980	GCA_002265085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/085/GCA_002265085.1_ASM226508v1	-	K3678
Lactobacillus salivarius	1624	PRJNA321782	321782	Terrabacteria group	Firmicutes	2.22216	32.9	-	LXZH01	115	2254	2091	9/12/17	9/14/17	Contig	Seoul National University	SAMN05003803	GCA_002289745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/745/GCA_002289745.1_ASM228974v1	-	KLF007
Moraxella catarrhalis	480	PRJNA297370	297370	Proteobacteria	Gammaproteobacteria	2.23147	43.6	-	LXHE01	26	2088	1907	6/3/16	4/5/17	Contig	Drexel University College of Medicine	SAMN04122865	GCA_001656295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/295/GCA_001656295.1_ASM165629v1	26912404	Z7574
Mycobacterium abscessus CF	1166017	PRJEA114709	114709	Terrabacteria group	Actinobacteria	4.98732	64.1	-	CAHZ01	1	4957	4801	1/7/13	5/19/17	Scaffold	EA3647 - Université de Versailles Saint-Quentin	SAMEA2271995	GCA_000333695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/695/GCA_000333695.1_ASM33369v1	-	CF
Bifidobacterium breve	1685	PRJDB4597	325619	Terrabacteria group	Actinobacteria	2.52987	59.2	-	BCXO01	57	2315	2086	6/10/16	4/5/17	Contig	Yakult Central Institute	SAMD00047599	GCA_001685765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/765/GCA_001685765.1_ASM168576v1	27340092	BR-14
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.22232	36.7	-	LPRX01	5	2356	2233	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305158	GCA_001560375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/375/GCA_001560375.1_NG05B_C03_01	-	NG05B_C03_01
Streptococcus sanguinis SK1 = NCTC 7863	888807	PRJNA280651	280651	Terrabacteria group	Firmicutes	2.30261	43.3	-	LBFD01	110	2306	2183	3/17/16	4/5/17	Contig	University of Malaya	SAMN03480625	GCA_001593525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/525/GCA_001593525.1_ASM159352v1	-	NCTC 7863
Staphylococcus saprophyticus	29385	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.58974	33	-	LMYR01	36	2545	2374	9/28/16	4/5/17	Scaffold	Tufts University	SAMN04244233	GCA_001747305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/305/GCA_001747305.1_ASM174730v1	-	937
Vibrio sp. ECSMB14106	1638949	PRJNA280146	280146	Proteobacteria	Gammaproteobacteria	4.68316	43.8	-	LAUM01	92	4191	4011	4/14/15	4/10/17	Contig	shanghai ocean university	SAMN03457171	GCA_000972265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/265/GCA_000972265.1_ASM97226v1	-	ECSMB14106
Paenibacillus polymyxa	1406	PRJNA294076	294076	Terrabacteria group	Firmicutes	5.15074	46.6	-	LIYK01	1391	4829	4563	9/1/15	9/1/15	Contig	Yangtze University	SAMN04007141	GCA_001277855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/855/GCA_001277855.1_ASM127785v1	-	YUPP-8
Pseudomonas stutzeri	316	PRJNA376805	376805	Proteobacteria	Gammaproteobacteria	4.56865	63.8	-	MWUI01	102	4315	3929	3/14/17	3/16/17	Contig	University of Dhaka	SAMN06433609	GCA_002027175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/175/GCA_002027175.1_ASM202717v1	-	40D2
Aeromonas hydrophila	644	PRJNA253773	253773	Proteobacteria	Gammaproteobacteria	5.08893	60.8	-	JPEH01	3	4818	4504	7/11/14	4/2/17	Contig	University of Malaya	SAMN02892980	GCA_000724965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/965/GCA_000724965.1_ASM72496v1	-	RB-AH
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.62148	67.2	-	LOVH01	135	6927	6531	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449197	GCA_001523405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/405/GCA_001523405.1_ASM152340v1	-	MSMB1175
Flavobacterium psychrophilum	96345	PRJEB21067	396411	FCB group	Bacteroidetes/Chlorobi group	2.70401	32.3	-	FYBY01	60	2442	2353	7/29/17	8/7/17	Contig	INRA	SAMEA104124974	GCA_900186345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/345/GCA_900186345.1_FPCH8_V1	-	CH8
Lactobacillus johnsonii	33959	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.85391	34.3	-	DBZR01	37	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06454931	GCA_002311795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/795/GCA_002311795.1_ASM231179v1	28894102	-
Escherichia albertii	208962	PRJDB3047	301492	Proteobacteria	Gammaproteobacteria	4.65692	49.7	-	BBVY01	50	4717	4421	11/6/15	2/25/17	Scaffold	University of Miyazaki	SAMD00026636	GCA_001514965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/965/GCA_001514965.1_ASM151496v1	26537224	EC05-81
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.73753	47.6	-	MECB01	59	3461	3302	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320425	GCA_001883115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/115/GCA_001883115.1_ASM188311v1	-	11/4666-4k
Streptococcus equinus JB1	1294274	PRJEB17456	351615	Terrabacteria group	Firmicutes	1.96736	37.6	-	FOTG01	28	1993	1895	10/31/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910290	GCA_900114525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/525/GCA_900114525.1_IMG-taxon_2593339156_annotated_assembly	-	JB1
Pectobacterium carotovorum subsp. brasiliense	180957	PRJNA255895	255895	Proteobacteria	Gammaproteobacteria	4.75798	52.1	-	JPSN01	39	4291	4080	8/6/14	4/2/17	Scaffold	Canadian Food Inspection Agency	SAMN02947973	GCA_000738105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/105/GCA_000738105.1_ASM73810v1	25858837	CFIA1009
Lactobacillus crispatus	47770	PRJNA316969	316969	Terrabacteria group	Firmicutes	2.14777	36.7	-	MAKH01	96	2185	1943	8/5/16	4/5/17	Scaffold	Loyola University Chicago	SAMN05244202	GCA_001700475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/475/GCA_001700475.1_ASM170047v1	-	C037
Aggregatibacter actinomycetemcomitans serotype b str. I23C	907492	PRJNA53939	53939	Proteobacteria	Gammaproteobacteria	2.11211	44.4	-	AEJQ02	30	2112	1950	9/29/11	4/4/17	Scaffold	University of Southern California School of Dentistry	SAMN02471945	GCA_000226835.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/835/GCA_000226835.3_AaI23Cv2.0	23194436	I23C
Gardnerella vaginalis 5-1	682148	PRJNA40895	40895	Terrabacteria group	Actinobacteria	1.67284	42	-	ADAN01	94	1383	1296	6/4/10	3/30/17	Contig	"Center for the Study of Biological Complexity, Virginia Commonwealth University"	SAMN02472071	GCA_000176495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/495/GCA_000176495.1_ASM17649v1	20540756	1-May
Lactobacillus paracasei subsp. paracasei Lpp7	1256200	PRJNA178427	178427	Terrabacteria group	Firmicutes	2.84294	46.3	-	ANJV01	611	3047	2563	6/11/13	4/10/17	Contig	Danone Research	SAMN02469713	GCA_000410255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/255/GCA_000410255.1_ASM41025v1	23894338	Lpp7
Staphylococcus hominis	1290	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.26069	31.3	-	JVHB01	48	2210	2148	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197631	GCA_001072965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/965/GCA_001072965.1_ASM107296v1	26230489	438_SHAE
Staphylococcus capitis	29388	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.53814	32.8	-	JVAJ01	82	2417	2352	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197805	GCA_001065645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/645/GCA_001065645.1_ASM106564v1	26230489	605_SAUR
Rhodococcus hoagii	43767	PRJNA316970	316970	Terrabacteria group	Actinobacteria	5.09174	68.8	-	LWHZ01	41	4726	4603	4/18/17	6/6/17	Contig	The University of Edinburgh	SAMN04632306	GCA_002095155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/155/GCA_002095155.1_ASM209515v1	27638249	PAM1496
Klebsiella variicola	244366	PRJNA292901	292901	Proteobacteria	Gammaproteobacteria	5.51683	57.5	-	MPCI01	1	5468	5211	11/10/16	2/21/17	Contig	Centers for Disease Control and Prevention	SAMN04014857	GCA_001875745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/745/GCA_001875745.1_ASM187574v1	-	AR_0016
Acinetobacter nosocomialis	106654	PRJNA255268	255268	Proteobacteria	Gammaproteobacteria	3.79181	38.6	-	JRUA01	52	3713	3516	12/17/14	4/2/17	Scaffold	The University of Queensland	SAMN03080634	GCA_000802905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/905/GCA_000802905.1_ASM80290v1	-	T228
Streptococcus oralis	1303	PRJNA242576	242576	Terrabacteria group	Firmicutes	2.04312	41.3	-	JPGB01	7	2058	1909	7/7/14	4/2/17	Contig	Aarhus University	SAMN02836943	GCA_000722845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/845/GCA_000722845.1_ASM72284v1	25053789	SK143
Achromobacter xylosoxidans	85698	PRJNA184698	184698	Proteobacteria	Betaproteobacteria	7.23396	66.2	-	MTLI01	319	6935	6550	6/14/17	6/19/17	Contig	Georgia Institute of Technology	SAMN06009453	GCA_002192705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/705/GCA_002192705.1_ASM219270v1	-	DPB_1
Pseudomonas syringae pv. maculicola	59511	PRJNA286818	286818	Proteobacteria	Gammaproteobacteria	5.9428	57.8	-	LGLF01	55	5361	4874	9/18/15	4/4/17	Scaffold	University of Toronto	SAMN03837763	GCA_001294185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/185/GCA_001294185.1_PmaKN91	-	KN91
Pseudomonas savastanoi pv. nerii	360921	PRJNA388634	388634	Proteobacteria	Gammaproteobacteria	5.83647	58.1	-	NIAY01	229	5540	5018	8/25/17	8/28/17	Scaffold	Savastovar	SAMN07179550	GCA_002270015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/270/015/GCA_002270015.1_ASM227001v1	-	ESC 23
Pseudoalteromonas sp. SW0106-04	1702169	PRJDB4170	294066	Proteobacteria	Gammaproteobacteria	4.05229	47.3	-	BCAI01	30	3750	3630	9/1/15	4/11/17	Contig	Shandong University	SAMD00039894	GCA_001293805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/805/GCA_001293805.1_ASM129380v1	-	SW0106-04
Vibrio alginolyticus	663	PRJNA313133	313133	Proteobacteria	Gammaproteobacteria	5.15805	44.5	-	LTYK01	135	4764	4508	3/9/16	4/5/17	Contig	Institute of Life Sciences	SAMN04523674	GCA_001584265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/265/GCA_001584265.1_ASM158426v1	27151803	ANC4-19
Legionella pneumophila subsp. pneumophila	91891	PRJNA288830	288830	Proteobacteria	Gammaproteobacteria	3.5739	38.4	chromosome:NZ_CP012019.1/CP012019.1	-	1	3269	3106	3/15/16	3/28/17	Complete Genome	University of Toronto	SAMN03839261	GCA_001592705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/705/GCA_001592705.1_ASM159270v1	26936325	Toronto-2005
Enterobacter asburiae	61645	PRJNA278224	278224	Proteobacteria	Gammaproteobacteria	4.72827	55.4	-	LDQF01	70	4529	4339	12/22/15	4/4/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401389	GCA_001475805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/805/GCA_001475805.1_ASM147580v1	26793183	NS7
Brucella sp. CMUL 004	1905695	PRJNA344954	344954	Proteobacteria	Alphaproteobacteria	3.29769	57.2	-	MKPW01	55	3372	3140	1/6/17	4/16/17	Contig	LAU	SAMN05853579	GCA_001937895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/895/GCA_001937895.1_ASM193789v1	-	CMUL 004
Pseudomonas amygdali pv. morsprunorum	129138	PRJNA287460	287460	Proteobacteria	Gammaproteobacteria	6.18329	58.1	-	LIHZ01	157	5941	5465	1/25/16	4/4/17	Contig	University of Edinburgh	SAMN03992210	GCA_001535785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/785/GCA_001535785.1_ASM153578v1	27145446	HRI-W 5269
Xanthomonas euvesicatoria	456327	PRJNA275499	275499	Proteobacteria	Gammaproteobacteria	5.15682	64.7	-	JZMA01	101	4639	4235	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03349333	GCA_001008905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/905/GCA_001008905.1_v1	26089818	681
Acinetobacter pittii	48296	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.17015	38.8	-	LLGF01	323	4163	3939	10/27/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145697	GCA_001415145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/145/GCA_001415145.1_ASM141514v1	-	ABBL075
Riemerella anatipestifer	34085	PRJNA308407	308407	FCB group	Bacteroidetes/Chlorobi group	2.35718	35.1	-	LUDR01	63	2270	2144	6/20/16	4/5/17	Scaffold	Sichuan Agricultural University	SAMN04395153	GCA_001670735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/670/735/GCA_001670735.1_RCAD0111	-	RCAD0111
Pantoea ananatis DAR 76143	1367456	PRJDB1421	219088	Proteobacteria	Gammaproteobacteria	5.24626	53.4	-	BATH01	254	-	-	9/12/13	9/16/15	Contig	Charles Sturt University	SAMD00000757	GCA_000467085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/085/GCA_000467085.1_ASM46708v1	-	DAR76143
Leptospira santarosai	28183	PRJNA257150	257150	Spirochaetes	Spirochaetia	3.89975	41.9	-	JQRM01	211	3965	3619	2/24/16	4/5/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947959	GCA_001569335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/335/GCA_001569335.1_ASM156933v1	26833181	56663
Citrobacter freundii	546	PRJNA252011	252011	Proteobacteria	Gammaproteobacteria	5.25565	51.5	-	JRTL01	158	5235	4979	10/26/15	4/4/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872794	GCA_001413275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/275/GCA_001413275.1_ASM141327v1	25501822	RU2 BHI18
Fusobacterium necrophorum	859	PRJEB16277	348859	Fusobacteria	Fusobacteriia	2.55037	34.1	-	FMXX01	87	2409	2180	10/20/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02983009	GCA_900104395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/395/GCA_900104395.1_IMG-taxon_2597490366_annotated_assembly	-	ATCC 25286
Streptococcus parasanguinis DORA_23_24	1403947	PRJNA221495	221495	Terrabacteria group	Firmicutes	2.82531	40.6791	plasmid pSPPPL_DORA_A_5_14_21:AZMG01001431.1	AZMG01	1431	3644	3644	12/16/13	12/16/13	Contig	"University of California, Berkeley"	SAMN02316559	GCA_000508565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/565/GCA_000508565.1_Strpp_DORA_23_24_velvet_1.1	-	-
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.92108	55.1	-	JUIC01	78	4857	4612	12/16/14	3/25/17	Contig	JCVI	SAMN03012821	GCA_000802825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/825/GCA_000802825.1_SPADES_assembly_of_Enterobacter_cloacae_ND5	-	ND5
Vibrio anguillarum	55601	PRJNA268283	268283	Proteobacteria	Gammaproteobacteria	4.21849	44.637	chromosome I:CP011475.1; chromosome II:CP011476.1; plasmid pJM1:CP016254.1	-	3	3703	3584	2/7/17	2/7/17	Chromosome	University of Copenhagen	SAMN03175443	GCA_001990025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/025/GCA_001990025.1_ASM199002v1	-	90-11-287
Kingella kingae KK83	1305592	PRJEB1616	194420	Proteobacteria	Betaproteobacteria	1.99103	46.8	-	CBSH01	1	2010	1785	9/11/13	4/2/17	Scaffold	URMITE	SAMEA2272003	GCA_000470475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/475/GCA_000470475.1_KK83	-	KK83
Streptococcus pseudopneumoniae	257758	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.08527	40.5	-	JUQX01	72	2126	1994	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03198051	GCA_001074565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/565/GCA_001074565.1_ASM107456v1	26230489	843_SPSE
Xanthomonas perforans	442694	PRJNA276688	276688	Proteobacteria	Gammaproteobacteria	5.26962	64.6	-	JZWA01	146	4746	4428	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03379914	GCA_001009945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/945/GCA_001009945.1_ASM100994v1	26089818	TB6
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.34978	55	-	JZZY01	91	5311	5046	3/19/15	4/6/17	Contig	JCVI	SAMN03283614	GCA_000956895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/895/GCA_000956895.1_ASM95689v1	-	35007
Aeromonas veronii	654	PRJEB7050	267821	Proteobacteria	Gammaproteobacteria	4.4108	58.9	-	CDBU01	66	4073	3859	11/24/14	4/3/17	Scaffold	UCONNMISEQ	SAMEA2752398	GCA_000820365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/365/GCA_000820365.1_PRJEB7050	-	CECT 4486
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98869	64.1	-	FVFA01	23	4949	4804	3/10/17	3/18/17	Contig	SC	SAMEA2070665	GCA_900132305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/305/GCA_900132305.1_10665_4_62	-	317
Mycobacterium africanum MAL020193	1354104	PRJNA211711	211711	Terrabacteria group	Actinobacteria	4.3871	65.5	-	JKYH01	7	4242	4031	4/29/14	4/2/17	Scaffold	Broad Institute	SAMN02231178	GCA_000667525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/525/GCA_000667525.1_Myco_tube_MAL020193_V1	-	MAL020193
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.71949	66.5	-	LOUH01	146	8104	7649	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449169	GCA_001522805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/805/GCA_001522805.1_ASM152280v1	-	INT3-BP120
Enterococcus hirae	1354	PRJEB8304	276434	Terrabacteria group	Firmicutes	2.7553	38	-	CDRF01	1456	-	-	2/24/15	2/24/15	Contig	CGS-GL	SAMEA3218006	GCA_000938855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/855/GCA_000938855.1_1b3B_assembly	-	1b3B
Streptococcus sobrinus TCI-367	1074080	PRJNA71927	71927	Terrabacteria group	Firmicutes	2.12009	43.5	-	AGHC01	325	2132	1873	10/6/11	3/30/17	Contig	JCVI	SAMN02436539	GCA_000228325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/325/GCA_000228325.2_SMUT2-NEX_9-367	-	TCI-367
Morganella morganii	582	PRJNA284809	284809	Proteobacteria	Gammaproteobacteria	2.56444	51.4	-	LDNQ01	1355	2859	2105	6/5/15	12/23/15	Contig	Aljouf university	SAMN03733277	GCA_001021105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/105/GCA_001021105.1_ASM102110v1	26697333	SA36
Geobacillus sp. CAMR12739	1482738	PRJNA243323	243323	Terrabacteria group	Firmicutes	3.41474	52.2	-	JHUR01	74	3511	1703	5/15/14	6/13/14	Contig	Centre for Microbial Ecology and Genomics	SAMN02715733	GCA_000691445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/445/GCA_000691445.1_CAMRasm9	24903881	CAMR12739
Mycobacterium chelonae	1774	PRJNA323571	323571	Terrabacteria group	Actinobacteria	4.98923	64	-	MAES01	36	4972	4815	3/3/17	3/6/17	Contig	LNCC	SAMN05186771	GCA_002013305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/305/GCA_002013305.1_ASM201330v1	-	96-1720
Vibrio campbellii	680	PRJNA257165	257165	Proteobacteria	Gammaproteobacteria	5.14756	45.7	-	JPTE01	6533	-	-	7/22/15	7/22/15	Contig	Naval Research Laboratory	SAMN02948013	GCA_001185415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/415/GCA_001185415.1_ASM118541v1	-	9078-83
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28361	32.4	chromosome:AP017585.1	-	1	-	-	1/24/17	1/27/17	Chromosome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053857	GCA_002357035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/035/GCA_002357035.1_ASM235703v1	-	HH-13
Rhodococcus fascians	1828	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.9722	64.4	-	NOZO01	44	5662	5500	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07414744	GCA_002259505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/505/GCA_002259505.1_ASM225950v1	-	A2
Leptospira kirschneri serovar Mozdok	437752	PRJNA264469	264469	Spirochaetes	Spirochaetia	4.48335	35.9	-	JSVJ02	174	4087	3721	11/6/14	4/4/17	Scaffold	Universidade Federal de Pelotas	SAMN03135151	GCA_000772835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/835/GCA_000772835.2_ASM77283v2	-	61H
Salinispora pacifica CNT003	1136417	PRJNA169836	169836	Terrabacteria group	Actinobacteria	5.46926	69.9	-	AZWE01	136	5103	4715	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597235	GCA_000514575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/575/GCA_000514575.1_ASM51457v1	-	CNT003
Elizabethkingia anophelis	1117645	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	3.97988	35.6	-	MAHM01	17	3676	3575	3/7/17	3/10/17	Contig	CDC	SAMN05273152	GCA_002023145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/145/GCA_002023145.1_ASM202314v1	-	3375
Pseudomonas sp. Z003-0.4C(8344-21)	1855380	PRJEB16408	349414	Proteobacteria	Gammaproteobacteria	6.11348	60	chromosome I:NZ_LT629756.1/LT629756.1	-	1	5497	5323	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216496	GCA_900104975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/975/GCA_900104975.1_IMG-taxon_2675902959_annotated_assembly	-	Z003-0.4C(8344-21)
Streptomyces sp. GBA 94-10	1218177	PRJNA171847	171847	Terrabacteria group	Actinobacteria	7.22447	73.0094	chromosome:NZ_CM002271.1/CM002271.1; plasmid pGBA1:NZ_CM002272.1/CM002272.1	ASHF01	2	6356	5878	11/5/13	3/9/17	Chromosome	The Institute for Information Transmission Problems	SAMN02469388	GCA_000495635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/635/GCA_000495635.1_GBA94-10.20	-	GBA 94-10
Paeniclostridium sordellii	1505	PRJEB8148	277672	Terrabacteria group	Firmicutes	3.44471	27.4	-	CDNK01	30	3346	3235	3/13/15	4/4/17	Contig	WTSI	SAMEA1572088	GCA_001372835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/835/GCA_001372835.1_SSCC18838	-	SSCC18838
Acinetobacter sp. NIPH 1867	1217702	PRJNA183239	183239	Proteobacteria	Gammaproteobacteria	3.93933	40.5	-	APRO01	2	3712	3570	4/17/13	4/6/17	Scaffold	Broad Institute	SAMN01087866	GCA_000369545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/545/GCA_000369545.1_Acin_sp_NIPH_1867_V1	-	NIPH 1867
Klebsiella sp. NFIX36	1566160	PRJEB16107	348603	Proteobacteria	Gammaproteobacteria	5.21931	58.2	-	FMWF01	21	5105	4883	10/17/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159356	GCA_900102775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/775/GCA_900102775.1_IMG-taxon_2600255303_annotated_assembly	-	NFIX36
Flavobacterium sp. NLM	1699509	PRJNA292164	292164	FCB group	Bacteroidetes/Chlorobi group	5.62099	33.6	-	LIAC01	44	4838	4726	6/28/17	6/30/17	Contig	GCAT-SEEK	SAMN03968561	GCA_002210235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/210/235/GCA_002210235.1_ASM221023v1	-	NLM
Frankia sp. CpI1-S	1502723	PRJNA248409	248409	Terrabacteria group	Actinobacteria	7.62476	72.4	-	JYFN01	153	6406	5945	3/5/15	4/10/17	Scaffold	University of New Hampshire	SAMN02798190	GCA_000948395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/395/GCA_000948395.1_CpI1-S	26769948	CpI1-S
Bacillus sp. 123MFChir2	1169144	PRJNA187935	187935	Terrabacteria group	Firmicutes	4.37422	36	-	ARSX01	110	4434	4089	4/26/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440515	GCA_000383235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/235/GCA_000383235.1_ASM38323v1	-	123MFChir2
Clostridium sp. HMSC19D07	1581191	PRJNA269820	269820	Terrabacteria group	Firmicutes	4.21773	28.2	-	LWOY01	98	3932	3785	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436194	GCA_001806735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/735/GCA_001806735.1_ASM180673v1	-	HMSC19D07
Sphingomonas sp. Root720	1736595	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	5.58803	66.6	-	LMID01	17	5232	5081	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155864	GCA_001428605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/605/GCA_001428605.1_Root720	26633631	Root720
Synechococcus sp. BL107	313625	PRJNA13559	13559	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.28503	54.2	-	AATZ01	1	2444	2365	10/12/06	4/17/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436154	GCA_000153805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/805/GCA_000153805.1_ASM15380v1	-	BL107
Rhodococcus sp. AD45	103808	PRJNA272922	272922	Terrabacteria group	Actinobacteria	6.79479	61.7393	plasmid unnamed:NZ_CM003191.1/CM003191.1	JYOP01	9	6252	6070	3/6/15	4/17/17	Contig	University of East Anglia	SAMN03329995	GCA_000949305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/305/GCA_000949305.1_ASM94930v1	25727256	AD45
Enterobacter sp. MGH 9	1329818	PRJNA201924	201924	Proteobacteria	Gammaproteobacteria	4.92682	55	-	JCLP01	5	4805	4550	2/3/14	4/10/17	Scaffold	Broad Institute	SAMN02138549	GCA_000534655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/655/GCA_000534655.1_Ente_cloa_complex_MGH_9_V2	-	MGH 9
Staphylococcus sp. HMSC059G05	1715156	PRJNA296284	296284	Terrabacteria group	Firmicutes	2.18607	31.4	-	LTIX01	59	2145	2071	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477531	GCA_001809865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/865/GCA_001809865.1_ASM180986v1	-	HMSC059G05
Corynebacterium sp. HMSC14H10	1581103	PRJNA269872	269872	Terrabacteria group	Actinobacteria	2.49097	58.9	-	LTZS01	48	2213	2122	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03287019	GCA_001807105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/105/GCA_001807105.1_ASM180710v1	-	HMSC14H10
Arthrobacter sp. 9MFCol3.1	1150398	PRJNA175161	175161	Terrabacteria group	Actinobacteria	4.50077	67.1	-	JIBJ01	31	4062	3900	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743949	GCA_000620385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/385/GCA_000620385.1_ASM62038v1	-	9MFCol3.1
Bradyrhizobium sp. CCBAU 15544	455353	PRJNA77219	77219	Proteobacteria	Alphaproteobacteria	8.48438	63.7	-	AJQF01	612	8340	7529	5/3/12	5/18/17	Contig	China Agricultural University	SAMN02469468	GCA_000261705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/705/GCA_000261705.1_15544	22586130	CCBAU 15544
Streptococcus sp. HMSC078H03	1715086	PRJNA296214	296214	Terrabacteria group	Firmicutes	2.13426	40	-	LTLF01	55	1994	1893	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477505	GCA_001808655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/655/GCA_001808655.1_ASM180865v1	-	HMSC078H03
Mycobacterium sp. AFP003	1964395	PRJEB20293	381895	Terrabacteria group	Actinobacteria	6.12144	66.2	-	FXEG01	4	-	-	5/12/17	9/23/17	Scaffold	URMITE	SAMEA103958175	GCA_900176255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/255/GCA_900176255.1_PRJEB20293	-	AFP003
Pantoea sp. YR512	1884370	PRJEB17406	351602	Proteobacteria	Gammaproteobacteria	5.27708	54.6	-	FOSD01	27	4834	4709	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05518863	GCA_900114175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/175/GCA_900114175.1_IMG-taxon_2690315618_annotated_assembly	-	YR512
Prevotella sp. P4-76	1602169	PRJNA272654	272654	FCB group	Bacteroidetes/Chlorobi group	3.26325	47.5	-	JXQI01	90	2621	2466	2/9/15	4/10/17	Contig	University of Ljubljana	SAMN03284261	GCA_000834015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/015/GCA_000834015.1_ASM83401v1	-	P4-76
Enterococcus sp. HMSC076D08	1739513	PRJNA300163	300163	Terrabacteria group	Firmicutes	2.98766	37.7	-	LTTK01	249	3097	2913	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480430	GCA_001815195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/195/GCA_001815195.1_ASM181519v1	-	HMSC076D08
Novosphingobium sp. 12-63-9	1970403	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	1.31062	62.8	-	NCCS01	65	1293	1217	8/16/17	8/16/17	Scaffold	None	SAMN06622392	GCA_002279875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/875/GCA_002279875.1_ASM227987v1	-	-
Treponema sp. UBA1798	1947705	PRJNA348753	348753	Spirochaetes	Spirochaetia	3.59819	43.2	-	DCFS01	350	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455216	GCA_002319875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/875/GCA_002319875.1_ASM231987v1	28894102	-
Citrobacter sp. NLAE-zl-C269	1855329	PRJEB17089	351701	Proteobacteria	Gammaproteobacteria	4.95978	53.2	-	FOJV01	24	4891	4653	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216502	GCA_900112055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/055/GCA_900112055.1_IMG-taxon_2651870313_annotated_assembly	-	NLAE-zl-C269
Methylobacterium sp. GXF4	1096546	PRJNA159455	159455	Proteobacteria	Alphaproteobacteria	6.11634	69.6	-	AKFK01	123	5861	5671	6/25/12	5/19/17	Contig	Rochester Institute of Technology	SAMN02470868	GCA_000272495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/495/GCA_000272495.1_ASM27249v1	22933776	GXF4
Nocardioides sp. UNC345MFTsu5.1	1449070	PRJNA234924	234924	Terrabacteria group	Actinobacteria	5.11085	72.1	-	JQJL01	13	-	-	8/28/14	8/28/14	Scaffold	DOE Joint Genome Institute	SAMN02745427	GCA_000745515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/515/GCA_000745515.1_ASM74551v1	-	UNC345MFTsu5.1
Erythrobacter sp. REDSEA-S45_B7	1811540	PRJNA289734	289734	Proteobacteria	Alphaproteobacteria	2.88697	63.5	-	LUNY01	285	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534574	GCA_001626595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/595/GCA_001626595.1_ASM162659v1	27377622	-
Marinobacter sp. REDSEA-S15_B16	1811543	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	2.88546	57.6	-	LUOK01	527	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534586	GCA_001626835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/835/GCA_001626835.1_ASM162683v1	27377622	-
Acidovorax sp. T1m	2006116	PRJNA388632	388632	Proteobacteria	Betaproteobacteria	4.21418	64.2	-	NIAZ01	233	3988	3697	6/14/17	6/19/17	Contig	Nanjing Agricultural University	SAMN07179510	GCA_002193515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/515/GCA_002193515.1_ASM219351v1	-	T1m
Psychrobacter sp. JCM 18901	1298609	PRJDB885	240166	Proteobacteria	Gammaproteobacteria	3.14583	42.7	-	BAWH01	58	2914	2875	3/5/14	5/2/14	Contig	The University of Tokyo	SAMD00000010	GCA_000586435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/435/GCA_000586435.1_ASM58643v1	24699965	JCM 18901
Janthinobacterium sp. TND4EL3	1907311	PRJEB18853	360731	Proteobacteria	Betaproteobacteria	6.51687	62.9	-	FTMV01	74	5915	5732	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05880566	GCA_900156175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/175/GCA_900156175.1_IMG-taxon_2708742400_annotated_assembly	-	TND4EL3
Eubacterium sp. UNK.MGS-25	1638784	PRJNA277012	277012	Terrabacteria group	Firmicutes	4.31296	56.2	-	LBCI01	339	-	-	4/24/15	6/10/15	Scaffold	The Mayo Clinic	SAMN03456686	GCA_000980675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/675/GCA_000980675.1_ASM98067v1	26021920	-
Brevundimonas sp. UBA4553	1946127	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.33327	67	-	DGLD01	23	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456269	GCA_002387245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/245/GCA_002387245.1_ASM238724v1	28894102	-
Alcanivorax sp. UBA1475	1945968	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.23376	63.4	-	DCSD01	151	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453295	GCA_002325465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/465/GCA_002325465.1_ASM232546v1	28894102	-
Paenibacillus sp. Soil522	1736388	PRJNA298127	298127	Terrabacteria group	Firmicutes	6.39899	47.1	-	LMRV01	120	5997	5642	11/2/15	4/6/17	Scaffold	ETH Zurich	SAMN04155653	GCA_001428245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/245/GCA_001428245.1_Soil522	26633631	Soil522
Ruminococcus sp. CAG:90	1262968	PRJEB1031	206922	Terrabacteria group	Firmicutes	2.32363	45.2	-	CBIR01	166	2036	2010	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138755	GCA_000437415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/415/GCA_000437415.1_MGS90	-	-
Thioalkalivibrio sp. ALE23	1265495	PRJNA182412	182412	Proteobacteria	Gammaproteobacteria	2.89657	67.4	-	ARKM01	66	2801	2664	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441664	GCA_000378545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/545/GCA_000378545.1_ASM37854v1	-	ALE23
Bacteroides sp. 14(A)	1163670	PRJNA196011	196011	FCB group	Bacteroidetes/Chlorobi group	7.214	42.8	-	JAGH01	7	5515	5295	1/14/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02584945	GCA_000526555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/555/GCA_000526555.1_ASM52655v1	-	14(A)
Exiguobacterium sp. UBA4604	1946495	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.85381	46.7	-	DGJE01	100	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454887	GCA_002393175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/175/GCA_002393175.1_ASM239317v1	28894102	-
Prochlorococcus sp. HOT_208_60	1945637	PRJNA371456	371456	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.886656	31.2	-	MVOP01	376	1162	1097	5/22/17	5/22/17	Scaffold	Massachusetts Institute of Technology	SAMN06290256	GCA_002156565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/565/GCA_002156565.1_ASM215656v1	-	HOT_208_60
Actinomyces sp. oral taxon 175 str. F0384	944560	PRJNA61829	61829	Terrabacteria group	Actinobacteria	3.13333	68.7	-	AFUR01	7	2605	2489	8/10/11	4/17/17	Contig	J. Craig Venter Institute	SAMN00195309	GCA_000223355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/223/355/GCA_000223355.2_ASM22335v1	-	F0384
Campylobacter sp. BCW_6871	1903284	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.83893	30.1	-	MJWQ01	83	1962	1785	10/4/16	4/13/17	Scaffold	University of California at Davis	SAMN03360218	GCA_001762325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/325/GCA_001762325.1_ASM176232v1	-	BCW_6871
Propionibacterium sp. MB3007	1410615	PRJNA223473	223473	Terrabacteria group	Actinobacteria	2.53926	60.1	-	JMLB01	17	2563	2411	5/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743352	GCA_000685945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/945/GCA_000685945.1_ASM68594v1	-	MB3007
Alistipes sp. UBA1686	1946007	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.05307	58.6	-	DCKA01	21	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452877	GCA_002320215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/215/GCA_002320215.1_ASM232021v1	28894102	-
Neisseria sp. HMSC073G10	1739369	PRJNA300019	300019	Proteobacteria	Betaproteobacteria	2.31761	49	-	LTYD01	66	2338	2173	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480033	GCA_001812605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/605/GCA_001812605.1_ASM181260v1	-	HMSC073G10
Sphingobacterium sp. UBA3549	1947496	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	5.46294	40	-	DFOE01	39	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451063	GCA_002376635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/635/GCA_002376635.1_ASM237663v1	28894102	-
Rothia sp. HMSC066H02	1739503	PRJNA300153	300153	Terrabacteria group	Actinobacteria	2.33146	59.4	-	LTTT01	22	1853	1775	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480419	GCA_001814995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/995/GCA_001814995.1_ASM181499v1	-	HMSC066H02
Rhodanobacter sp. 67-28	1895822	PRJNA279279	279279	Proteobacteria	Gammaproteobacteria	4.07786	67.5	-	MKTU01	82	3675	3517	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660563	GCA_001898415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/415/GCA_001898415.1_ASM189841v1	-	-
Sphingobium sp. Z007	627495	PRJEB12244	390091	Proteobacteria	Alphaproteobacteria	4.58129	63.5	-	FBVX01	120	4460	4220	6/11/17	6/21/17	Scaffold	UNIVERSITY OF ZUERICH	SAMEA3718970	GCA_900013455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/455/GCA_900013455.1_Sphingobium_sp_Z007_rep_C_with_predator	-	-
Halomonas sp. JB380	1434831	PRJEB19046	374423	Proteobacteria	Gammaproteobacteria	3.97828	53.8	-	FUKM01	65	3715	3566	2/11/17	5/31/17	Contig	MICALIS	SAMEA80403418	GCA_900163645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/645/GCA_900163645.1_ASM90016364v1	-	JB380
Rhizobium sp. CF048	1500299	PRJNA247543	247543	Proteobacteria	Alphaproteobacteria	6.82463	59.9	-	JUHN01	49	6701	6338	12/9/14	4/10/17	Scaffold	DOE Joint Genome Institute	SAMN02787067	GCA_000799845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/845/GCA_000799845.1_ASM79984v1	-	CF048
Chryseobacterium sp. FF12	1608584	PRJEB10923	297015	FCB group	Bacteroidetes/Chlorobi group	2.56373	37.2	-	CYUH01	15	2409	2311	9/23/15	4/11/17	Contig	URMITE	SAMEA3546016	GCA_001403755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/403/755/GCA_001403755.1_Chryseobacterium_senegalensis	-	FF12
Mesorhizobium sp. LNJC372A00	1287256	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.52486	62.5	-	AYWN01	50	6405	5948	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359667	GCA_000502455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/455/GCA_000502455.1_Mloti_LNJC372A00	-	LNJC372A00
Variovorax sp. JGI 0001020-M05	1286839	PRJNA187232	187232	Proteobacteria	Betaproteobacteria	1.4375	66.4	-	AXWZ01	136	-	-	10/25/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02440726	GCA_000482885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/885/GCA_000482885.1_ASM48288v1	-	JGI 0001020-M05
Xanthomonas translucens	343	PRJNA302486	302486	Proteobacteria	Gammaproteobacteria	4.52421	68	-	LNVU01	252	3969	3513	12/8/15	4/5/17	Scaffold	Kansas State University	SAMN04279070	GCA_001462065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/065/GCA_001462065.1_ASM146206v1	-	XT5770
Snodgrassella alvi SCGC AB-598-O11	1445515	PRJNA233647	233647	Proteobacteria	Betaproteobacteria	1.37491	40.2	-	JAIK01	401	1653	1617	7/14/14	7/14/14	Contig	Yale University	SAMN02570540	GCA_000725185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/185/GCA_000725185.1_sag_b_o11_noCtrl	25210772	-
Hyphomonas sp. UBA4208	1946629	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.42642	58.3	-	DFTQ01	29	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455427	GCA_002383005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/005/GCA_002383005.1_ASM238300v1	28894102	-
Microbacterium sp. KROCY2	1305732	PRJNA195886	195886	Terrabacteria group	Actinobacteria	2.76582	70.6	-	JAGG01	1	2451	2314	1/14/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02584943	GCA_000526535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/535/GCA_000526535.1_ASM52653v1	-	KROCY2
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.855	58.9	-	LNXB01	50	4628	4500	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339865	GCA_001681765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/765/GCA_001681765.1_ASM168176v1	-	S1424
Streptomyces rimosus subsp. rimosus	132474	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.59298	71.9	-	LMWF01	315	8467	8012	1/7/16	3/12/17	Contig	University of Illinois	SAMN02900606	GCA_001507395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/395/GCA_001507395.1_ASM150739v1	-	NRRL WC-3897
Butyrivibrio sp. AE3004	1506994	PRJNA239125	239125	Terrabacteria group	Firmicutes	4.47091	39.6	-	JNLQ01	6	3983	3829	6/11/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02841232	GCA_000703165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/165/GCA_000703165.1_ASM70316v1	-	AE3004
Ensifer sp. OV372	1855293	PRJEB17291	351468	Proteobacteria	Alphaproteobacteria	7.32829	62.3	-	FOON01	67	7049	6747	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216459	GCA_900113205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/205/GCA_900113205.1_IMG-taxon_2609459711_annotated_assembly	-	OV372
Sphingopyxis sp. H115	1759073	PRJNA294421	294421	Proteobacteria	Alphaproteobacteria	4.49389	64.3	-	LNSA01	63	4331	4179	12/15/15	4/11/17	Contig	US EPA	SAMN04256113	GCA_001468465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/465/GCA_001468465.1_ASM146846v1	27034493	H115
Bartonella ancashensis	1318743	PRJNA248888	248888	Proteobacteria	Alphaproteobacteria	1.46769	38.4	chromosome:NZ_CP010401.1/CP010401.1	-	1	1317	1203	9/14/15	4/11/17	Complete Genome	Walter Reed Army Institute of Research	SAMN02803869	GCA_001281405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/405/GCA_001281405.1_ASM128140v1	26543106	20
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	3.10546	33.8	-	LZGJ01	55	2827	2688	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179588	GCA_001690735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/735/GCA_001690735.1_ASM169073v1	-	P54G
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.08187	41.6	-	FSSG01	23	976	891	3/18/17	3/24/17	Scaffold	Functional Genomics Genter Zurich	SAMEA4555929	GCA_900149485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/485/GCA_900149485.1_14-23b	-	-
Salinivibrio sp. IB563	1933894	PRJNA368653	368653	Proteobacteria	Gammaproteobacteria	3.48382	50.5	-	MUEN01	173	3226	3027	2/14/17	4/17/17	Scaffold	Universidad de Sevilla	SAMN06268099	GCA_001995785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/785/GCA_001995785.1_ASM199578v1	-	IB563
Klebsiella michiganensis	1134687	PRJNA307354	307354	Proteobacteria	Gammaproteobacteria	6.14833	55.7	-	LQHH01	133	5976	5730	3/8/16	2/21/17	Contig	UC Davis	SAMN04378714	GCA_001583485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/485/GCA_001583485.1_KlebPneuJA29	27151785	UCD-JA29
Achromobacter sp. 2789STDY5608632	1806495	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	6.37331	67.6	-	CYSY01	39	5794	5632	9/19/15	4/11/17	Scaffold	SC	SAMEA2247597	GCA_001299015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/015/GCA_001299015.1_11861_6_24	-	2789STDY5608632
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	7.39833	43.7	-	MPTT01	141	6715	6552	1/18/17	4/6/17	Contig	Cornell University	SAMN05772521	GCA_001955785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/785/GCA_001955785.1_ASM195578v1	-	FSL R5-0937
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.53123	50.9	-	MPQI01	49	2461	2372	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016255	GCA_002020475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/475/GCA_002020475.1_ASM202047v1	-	-
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.82644	32.3	-	FQKN01	13	2837	2664	11/24/16	4/5/17	Contig	SC	SAMEA3449102	GCA_900126745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/745/GCA_900126745.1_17175_3_46	-	3688STDY6125100
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.80716	56.8	-	NFXX01	124	5874	5520	6/9/17	6/12/17	Contig	JCVI	SAMN05960909	GCA_002187465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/465/GCA_002187465.1_ASM218746v1	-	CAB1577
Enterobacter kobei	208224	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.22237	54.5	-	BEGI01	138	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089514	GCA_002334635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/635/GCA_002334635.1_ASM233463v1	-	TUM11131
Proteiniphilum sp. UBA4892	1947259	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.48172	44.3	-	DHCW01	188	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455954	GCA_002399035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/035/GCA_002399035.1_ASM239903v1	28894102	-
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.99006	66.5	-	LPJE01	85	6481	6158	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449582	GCA_001532725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/725/GCA_001532725.1_ASM153272v1	-	MSMB2206WGS
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.57467	67.7	-	LPIY01	99	6864	6509	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449576	GCA_001532645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/645/GCA_001532645.1_ASM153264v1	-	MSMB2170WGS
Fibrobacter sp. UBA1765	1946528	PRJNA348753	348753	FCB group	Fibrobacteres	3.34937	45.5	-	DCGZ01	194	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452464	GCA_002314675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/675/GCA_002314675.1_ASM231467v1	28894102	-
Xanthomonas axonopodis pv. manihotis str. IBSBF 2818	1185686	PRJNA163767	163767	Proteobacteria	Gammaproteobacteria	4.85169	65.1	-	AKDR01	139	4301	3991	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090322	GCA_000266105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/105/GCA_000266105.1_IBSBF2818	22699502	IBSBF 2818
Xanthomonas axonopodis pv. manihotis str. IBSBF 2819	1185687	PRJNA163769	163769	Proteobacteria	Gammaproteobacteria	4.85281	65.1	-	AKDS01	557	4553	3921	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090323	GCA_000266125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/125/GCA_000266125.1_IBSBF2819	22699502	IBSBF 2819
Fibrobacter sp. UBA1717	1946527	PRJNA348753	348753	FCB group	Fibrobacteres	2.54123	49.2	-	DCIV01	259	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456273	GCA_002317455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/455/GCA_002317455.1_ASM231745v1	28894102	-
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.52744	67.7	-	LPKN01	97	6854	6508	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449620	GCA_001532905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/905/GCA_001532905.1_ASM153290v1	-	MSMB653WGS
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.98517	66.5	-	LPJD01	87	6487	6164	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449581	GCA_001532735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/735/GCA_001532735.1_ASM153273v1	-	MSMB2202WGS
Proteiniphilum sp. UBA4888	1947258	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.58436	46.6	-	DHDA01	61	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451273	GCA_002399095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/095/GCA_002399095.1_ASM239909v1	28894102	-
Enterobacter kobei	208224	PRJNA343406	343406	Proteobacteria	Gammaproteobacteria	4.74515	55.4	-	MKXD01	3	4473	4292	1/9/17	1/9/17	Scaffold	Zhejiang Sci-Tech University	SAMN05787337	GCA_001940295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/295/GCA_001940295.1_ASM194029v1	-	JCM 8580
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.36536	57.8	-	NFXV01	89	5368	5057	6/9/17	6/12/17	Contig	JCVI	SAMN05960917	GCA_002187485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/485/GCA_002187485.1_ASM218748v1	-	G1129
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.83369	32.3	-	FQKT01	15	2861	2685	11/23/16	4/6/17	Contig	SC	SAMEA3449107	GCA_900126775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/775/GCA_900126775.1_17175_3_51	-	3688STDY6125105
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.5424	50.8	-	MPQK01	63	2471	2375	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016257	GCA_002020485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/485/GCA_002020485.1_ASM202048v1	-	-
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	6.93246	44	-	MPTU01	128	6134	5975	1/18/17	4/6/17	Contig	Cornell University	SAMN05772520	GCA_001955835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/835/GCA_001955835.1_ASM195583v1	-	FSL F4-0126
Achromobacter sp. 2789STDY5608612	1806494	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	6.65624	67.4	-	CYTE01	53	6143	5929	9/19/15	4/11/17	Scaffold	SC	SAMEA2247577	GCA_001299035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/035/GCA_001299035.1_11861_6_6	-	2789STDY5608612
Klebsiella michiganensis	1134687	PRJNA318538	318538	Proteobacteria	Gammaproteobacteria	5.77985	56	-	LWKU01	6	5574	5284	4/27/16	2/21/17	Contig	Lawrence Berkeley National Laboratory	SAMN04858204	GCA_001633115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/115/GCA_001633115.1_ASM163311v1	-	M5al
Salinivibrio sp. IC317	1909452	PRJNA368688	368688	Proteobacteria	Gammaproteobacteria	3.27826	50.9	-	MUEP01	236	3104	2866	2/14/17	2/22/17	Scaffold	Universidad de Sevilla	SAMN06269576	GCA_001995875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/875/GCA_001995875.1_ASM199587v1	-	IC317
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.08386	41.6	-	FTQS01	1	973	909	3/18/17	4/10/17	Scaffold	Functional Genomics Genter Zurich	SAMEA4555927	GCA_900149535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/535/GCA_900149535.1_2-26b	-	-
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.54911	34.7	-	LZGI01	20	2336	2257	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179589	GCA_001690755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/755/GCA_001690755.1_ASM169075v1	-	P62G
Streptococcus pyogenes	1314	PRJNA284654	284654	Terrabacteria group	Firmicutes	1.89698	38.4	chromosome:NZ_CP011535.2/CP011535.2	-	1	1944	1806	6/5/15	3/28/17	Complete Genome	INSERM	SAMN03733610	GCA_001020185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/185/GCA_001020185.2_ASM102018v2	26184934	M28PF1
Sphingopyxis sp. H107	1759082	PRJNA294421	294421	Proteobacteria	Alphaproteobacteria	4.30814	64.8	-	LNSJ01	57	4250	4109	12/15/15	4/11/17	Contig	US EPA	SAMN04256163	GCA_001468475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/475/GCA_001468475.1_ASM146847v1	-	H107
Ensifer sp. JGI 0001011-A08	1286840	PRJNA187235	187235	Proteobacteria	Alphaproteobacteria	0.657917	60.5	-	AXWX01	38	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440756	GCA_000485015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/015/GCA_000485015.1_ASM48501v1	-	JGI 0001011-A08
Butyrivibrio sp. INlla18	1520806	PRJEB16187	348931	Terrabacteria group	Firmicutes	3.2546	40.1	-	FMXK01	34	3015	2919	10/20/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02910275	GCA_900103635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/635/GCA_900103635.1_IMG-taxon_2593339254_annotated_assembly	-	INlla18
Streptomyces rimosus R6-500	1421017	PRJNA227408	227408	Terrabacteria group	Actinobacteria	8.88174	72	-	JJNO01	243	7863	7327	6/13/14	3/9/17	Scaffold	TU Kaiserslautern	SAMN02721380	GCA_000707925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/925/GCA_000707925.1_r6_51	25035320	R6-500
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.65638	58.9	-	LNXC01	63	4426	4295	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339867	GCA_001681795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/795/GCA_001681795.1_ASM168179v1	-	S1611
Microbacterium sp. MRS-1	1451261	PRJNA236071	236071	Terrabacteria group	Actinobacteria	3.01067	69.3	-	JAUF01	142	2923	2719	3/4/14	4/9/17	Contig	Madurai Kamaraj University	SAMN02951918	GCA_000585455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/455/GCA_000585455.1_Denovo_assembly	-	MRS-1
Hyphomonas sp. UBA3988	1946628	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.43494	57.4	-	DGCC01	107	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454242	GCA_002384465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/465/GCA_002384465.1_ASM238446v1	28894102	-
Snodgrassella alvi SCGC AB-598-O02	1443103	PRJNA233318	233318	Proteobacteria	Betaproteobacteria	1.60139	37.8	-	JAIL01	259	1661	1620	7/14/14	7/14/14	Contig	Yale University	SAMN02567660	GCA_000725195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/195/GCA_000725195.1_sag_b_o02_noCtrl	25210772	-
Xanthomonas translucens	343	PRJNA302486	302486	Proteobacteria	Gammaproteobacteria	4.6858	67.8	-	LNVQ01	467	4160	3571	12/8/15	4/5/17	Scaffold	Kansas State University	SAMN04279075	GCA_001462075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/075/GCA_001462075.1_ASM146207v1	-	LW16
Variovorax sp. JGI 0001013-B23	1286838	PRJNA187231	187231	Proteobacteria	Betaproteobacteria	0.391287	65.8	-	AXXA01	49	-	-	10/25/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02440757	GCA_000482905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/905/GCA_000482905.1_ASM48290v1	-	JGI 0001013-B23
Mesorhizobium sp. LNJC374B00	1287258	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.52607	62.5	-	AYWM01	56	6397	5935	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359668	GCA_000502475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/475/GCA_000502475.1_Mloti_LNJC374B00	-	LNJC374B00
Chryseobacterium sp. Leaf201	1735672	PRJNA297956	297956	FCB group	Bacteroidetes/Chlorobi group	4.33896	39.5	-	LMKA01	144	3972	3827	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151680	GCA_001421435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/435/GCA_001421435.1_Leaf201	26633631	Leaf201
Methylophaga sp. UBA3618	1946889	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	1.78824	45	-	DFLN01	9	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454523	GCA_002375185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/185/GCA_002375185.1_ASM237518v1	28894102	-
Rhizobium sp. Root1203	1736427	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	6.70546	60.1	-	LMCW01	69	6631	6273	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155696	GCA_001424945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/945/GCA_001424945.1_Root1203	26633631	Root1203
Halomonas sp. KHS3	866350	PRJNA270219	270219	Proteobacteria	Gammaproteobacteria	5.17734	54.7	-	JWHY01	24	4793	4642	1/30/15	4/17/17	Scaffold	INDEAR	SAMN03263895	GCA_000830495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/495/GCA_000830495.1_ASM83049v1	25767220	KHS3
Sphingobium sp. AP50	1884369	PRJEB16804	350942	Proteobacteria	Alphaproteobacteria	6.16748	62.3	-	FNYZ01	75	5781	5549	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05518849	GCA_900109095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/095/GCA_900109095.1_IMG-taxon_2687453790_annotated_assembly	-	AP50
Rhodanobacter sp. 68-29	1895823	PRJNA279279	279279	Proteobacteria	Gammaproteobacteria	4.05687	68.5	-	MKWC01	29	3559	3453	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660623	GCA_001899565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/565/GCA_001899565.1_ASM189956v1	-	-
Rothia sp. HMSC065D09	1739511	PRJNA300161	300161	Terrabacteria group	Actinobacteria	2.33135	59.4	-	LTTM01	23	1867	1776	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480428	GCA_001815155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/155/GCA_001815155.1_ASM181515v1	-	HMSC065D09
Sphingobacterium sp. UBA3519	1947495	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	5.69242	40	-	DFPI01	37	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455535	GCA_002377215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/215/GCA_002377215.1_ASM237721v1	28894102	-
Neisseria sp. HMSC067G12	1739375	PRJNA300025	300025	Proteobacteria	Betaproteobacteria	2.30418	49.1	-	LTXX01	53	2294	2157	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480039	GCA_001812725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/725/GCA_001812725.1_ASM181272v1	-	HMSC067G12
Propionibacterium sp. DORA_15	1403938	PRJNA221492	221492	Terrabacteria group	Actinobacteria	0.336576	53.1	-	AZMD01	352	565	565	12/16/13	12/16/13	Scaffold	"University of California, Berkeley"	SAMN02316559	GCA_000508665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/665/GCA_000508665.1_PS_DORA_15_velvet_1.1	-	-
Campylobacter sp. BCW_6872	1903285	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.72727	30.6	-	MJWR01	38	1791	1664	10/4/16	4/13/17	Scaffold	University of California at Davis	SAMN03360219	GCA_001762345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/345/GCA_001762345.1_ASM176234v1	-	BCW_6872
Actinomyces sp. ICM47	936548	PRJNA78551	78551	Terrabacteria group	Actinobacteria	2.4441	64.7	-	ALCA01	143	2069	1902	7/16/12	4/17/17	Contig	J. Craig Venter Institute	SAMN00828776	GCA_000278725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/725/GCA_000278725.1_AspICM47v1.0	-	ICM47
Prochlorococcus sp. W4	569153	PRJNA169363	169363	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.765485	29.9	-	ALPD01	104	-	-	8/20/12	7/29/15	Contig	Massachusetts Institute of Technology	SAMN02470471	GCA_000291785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/785/GCA_000291785.1_ProW4_v1.0	22895163	-
Exiguobacterium sp. UBA5002	1946497	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.90386	47.2	-	DGYQ01	49	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456500	GCA_002396765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/765/GCA_002396765.1_ASM239676v1	28894102	-
Bacteroides sp. UW	1450439	PRJNA235322	235322	FCB group	Bacteroidetes/Chlorobi group	5.58328	43.8	-	JANI01	77	4910	4600	11/17/14	4/9/17	Contig	University of Washington	SAMN02951417	GCA_000785025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/025/GCA_000785025.1_ASM78502v1	25529016	UW
Thioalkalivibrio sp. AL5	1158149	PRJNA182413	182413	Proteobacteria	Gammaproteobacteria	2.98044	65.7	-	ARKN01	11	2865	2758	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440471	GCA_000378565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/565/GCA_000378565.1_ASM37856v1	-	AL5
Ruminococcus sp. CAG:353	1262955	PRJEB846	206941	Terrabacteria group	Firmicutes	2.54632	47.1	-	CBJQ01	116	2370	2331	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138800	GCA_000438315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/315/GCA_000438315.1_MGS353	-	-
Paenibacillus sp. Soil787	1736411	PRJNA298127	298127	Terrabacteria group	Firmicutes	7.66405	44.5	-	LMSP01	48	6825	6508	11/2/15	4/11/17	Scaffold	ETH Zurich	SAMN04155676	GCA_001429545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/545/GCA_001429545.1_Soil787	26633631	Soil787
Alcanivorax sp. UBA2114	1945975	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.21034	63.4	-	DCYI01	240	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455334	GCA_002331785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/785/GCA_002331785.1_ASM233178v1	28894102	-
Eubacterium sp. UNK.MGS-26	1638785	PRJNA277012	277012	Terrabacteria group	Firmicutes	4.44006	56.1	-	LBCJ01	345	-	-	4/24/15	6/10/15	Scaffold	The Mayo Clinic	SAMN03456687	GCA_000980695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/695/GCA_000980695.1_ASM98069v1	26021920	-
Janthinobacterium sp. Ant5-2	881002	PRJNA293097	293097	Proteobacteria	Betaproteobacteria	4.12832	61.3	-	LITI01	1703	-	-	9/3/15	9/3/15	Contig	University of Alabama at Birmingham	SAMN03996953	GCA_001278625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/625/GCA_001278625.1_ASM127862v1	-	Ant5-2
Psychrobacter sp. JCM 18902	1298607	PRJDB883	240164	Proteobacteria	Gammaproteobacteria	3.27433	42.9	-	BAWI01	33	2838	2798	3/5/14	5/2/14	Contig	The University of Tokyo	SAMD00000011	GCA_000586455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/455/GCA_000586455.1_ASM58645v1	24699965	JCM 18902
Acidovorax sp. GW101-3H11	1813946	PRJNA314893	314893	Proteobacteria	Betaproteobacteria	5.44252	65.6	-	LUKZ01	39	4959	4794	4/27/16	4/12/17	Scaffold	Lawrence Berkeley National Laboratory	SAMN04545320	GCA_001633105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/105/GCA_001633105.1_ASM163310v1	-	GW101-3H11
Marinobacter sp. REDSEA-S21_B2N3	1811544	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	4.37222	57	-	LUOL01	262	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534587	GCA_001626955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/955/GCA_001626955.1_ASM162695v1	27377622	-
Erythrobacter sp. ANT-B3C2	1844758	PRJNA319586	319586	Proteobacteria	Alphaproteobacteria	2.73517	66.5	-	LXQI01	43	-	-	7/12/16	7/12/16	Scaffold	CMEG University of Pretoria	SAMN04932542	GCA_001683845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/845/GCA_001683845.1_ANT-B3C2	-	-
Nocardioides sp. DN36	652434	PRJDB890	243768	Terrabacteria group	Actinobacteria	2.09389	68.7	-	BBEJ01	1776	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016813	GCA_001312705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/705/GCA_001312705.1_ASM131270v1	-	JCM 16518
Methylobacterium sp. B1	91459	PRJDA69949	69949	Proteobacteria	Alphaproteobacteria	5.90512	69.6	-	BACT01	1090	5980	4750	12/26/12	5/19/17	Contig	Kazusa DNA Research Institute	SAMD00036564	GCA_000333255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/255/GCA_000333255.1_ASM33325v1	-	B1
uncultured Citrobacter sp.	200446	PRJEB13524	390596	Proteobacteria	Gammaproteobacteria	5.05473	51.8	-	FLUA01	18	4727	4590	6/15/17	6/15/17	Scaffold	Genoscope CEA	SAMEA3931509	GCA_900079705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/705/GCA_900079705.1_APW_PRJEB13524_v1	-	-
Treponema sp. UBA1635	1947702	PRJNA348753	348753	Spirochaetes	Spirochaetia	1.5677	50.4	-	DCLZ01	45	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456996	GCA_002321195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/195/GCA_002321195.1_ASM232119v1	28894102	-
Novosphingobium sp. 32-60-15	1970410	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	3.7646	59.6	-	NCEN01	61	3614	3493	8/16/17	8/16/17	Scaffold	None	SAMN06622345	GCA_002280675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/675/GCA_002280675.1_ASM228067v1	-	-
Enterococcus sp. HMSC034B11	1715070	PRJNA296198	296198	Terrabacteria group	Firmicutes	2.80881	37.7	-	LTSA01	326	2882	2712	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498597	GCA_001835885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/885/GCA_001835885.1_ASM183588v1	-	HMSC034B11
Prevotella sp. P5-60	1602170	PRJNA272657	272657	FCB group	Bacteroidetes/Chlorobi group	3.02282	48.1	-	JXQJ01	163	2358	2214	2/9/15	4/10/17	Contig	University of Ljubljana	SAMN03284262	GCA_000834035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/035/GCA_000834035.1_ASM83403v1	-	P5-60
Pantoea sp. OV426	1881036	PRJEB17129	351319	Proteobacteria	Gammaproteobacteria	4.75126	55.2	-	FOVG01	12	4454	4287	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05428971	GCA_900115075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/075/GCA_900115075.1_IMG-taxon_2690315639_annotated_assembly	-	OV426
Mycobacterium sp. VKM Ac-1816D	1273686	PRJNA183984	183984	Terrabacteria group	Actinobacteria	5.4136	66.8	-	AOHQ01	146	5096	4969	6/28/13	4/8/17	Contig	Center of Innovations and Technologies “Biologically active compounds and their applications”	SAMN02469804	GCA_000416385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/385/GCA_000416385.1_M6May	23474435	VKM Ac-1816D
Streptococcus sp. HMSC070B10	1715092	PRJNA296220	296220	Terrabacteria group	Firmicutes	2.10328	39.9	-	LTLE01	93	2157	1981	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477508	GCA_001808665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/665/GCA_001808665.1_ASM180866v1	-	HMSC070B10
Bradyrhizobium sp. CCBAU 15615	1128179	PRJNA77219	77219	Proteobacteria	Alphaproteobacteria	8.85254	63.7	-	AJQG01	453	8600	7815	5/3/12	5/18/17	Contig	China Agricultural University	SAMN02469484	GCA_000261725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/725/GCA_000261725.1_15615	22586130	CCBAU 15615
Arthrobacter sp. Edens01	1732020	PRJNA297456	297456	Terrabacteria group	Actinobacteria	3.63918	64.8	-	LKIU01	10	3383	3272	10/6/15	4/11/17	Scaffold	Oklahoma State Universtiy	SAMN04123916	GCA_001307035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/035/GCA_001307035.1_ASM130703v1	26679586	Edens01
Corynebacterium sp. HMSC05C01	1581113	PRJNA269882	269882	Terrabacteria group	Actinobacteria	2.39023	61.7	-	LWOM01	52	2275	2176	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03609716	GCA_001807155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/155/GCA_001807155.1_ASM180715v1	-	HMSC05C01
Staphylococcus sp. HMSC077E12	1715167	PRJNA296295	296295	Terrabacteria group	Firmicutes	2.49172	33.8	-	LTIS01	40	2374	2283	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477537	GCA_001809965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/965/GCA_001809965.1_ASM180996v1	-	HMSC077E12
Enterobacter sp. MGH 7	1329816	PRJNA201922	201922	Proteobacteria	Gammaproteobacteria	5.27628	54.9	-	JCLQ01	7	5211	4945	2/3/14	4/9/17	Scaffold	Broad Institute	SAMN02138547	GCA_000534675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/675/GCA_000534675.1_Ente_cloa_complex_MGH_7_V2	-	MGH 7
Rhodococcus sp. ARP2	1661385	PRJNA283580	283580	Terrabacteria group	Actinobacteria	6.30204	62.4	-	LEKE01	120	5946	5730	6/18/15	4/10/17	Contig	University of Wuerzburg	SAMN03653322	GCA_001029585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/585/GCA_001029585.1_ASM102958v1	-	ARP2
Synechococcus sp. RS9916	221359	PRJNA13557	13557	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.66487	59.8	-	AAUA01	1	2740	2660	10/12/06	4/17/17	Scaffold	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436107	GCA_000153825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/825/GCA_000153825.1_ASM15382v1	-	RS9916
Sphingomonas sp. Root241	1736501	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	4.2125	66	-	LMIV01	6	3881	3745	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155770	GCA_001428865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/865/GCA_001428865.1_Root241	26633631	Root241
Clostridium sp. HMSC19E03	1581192	PRJNA269822	269822	Terrabacteria group	Firmicutes	4.05983	28.4	-	LWOX01	64	3722	3618	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436199	GCA_001806785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/785/GCA_001806785.1_ASM180678v1	-	HMSC19E03
Bacillus sp. URHB0009	1298866	PRJNA190840	190840	Terrabacteria group	Firmicutes	5.37721	39.1	-	AUER01	74	5280	4970	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440856	GCA_000426085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/085/GCA_000426085.1_ASM42608v1	-	URHB0009
Frankia sp. G2	795642	PRJEB11831	302875	Terrabacteria group	Actinobacteria	9.53799	70.9	-	FAOZ01	83	7744	7342	11/23/15	8/2/17	Scaffold	DOE - Joint Genome Institute	SAMN04233181	GCA_001536285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/285/GCA_001536285.1_IMG-taxon_2634166352_annotated_assembly	-	DSM 45899
Flavobacterium sp. IR1	2026304	PRJNA377240	377240	FCB group	Bacteroidetes/Chlorobi group	5.81304	34.7	-	NQOT01	1130	4759	4609	8/29/17	8/30/17	Contig	Hoekmine BV	SAMN06459178	GCA_002277835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/835/GCA_002277835.1_ASM227783v1	-	IR1
Klebsiella sp. NFIX16	1566177	PRJEB16162	348916	Proteobacteria	Gammaproteobacteria	5.28191	58.1	-	FMWV01	22	5212	4973	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159381	GCA_900103095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/095/GCA_900103095.1_IMG-taxon_2600255289_annotated_assembly	-	NFIX16
Acinetobacter sp. ANC 3862	1217705	PRJNA183238	183238	Proteobacteria	Gammaproteobacteria	3.83536	38.6	-	APRP01	3	3686	3529	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01087869	GCA_000369565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/565/GCA_000369565.1_Acin_sp_ANC_3862_V1	-	ANC 3862
Paeniclostridium sordellii	1505	PRJEB8149	277673	Terrabacteria group	Firmicutes	3.44017	27.4	-	CDNE01	27	3350	3237	3/13/15	4/4/17	Contig	WTSI	SAMEA1572100	GCA_001372855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/855/GCA_001372855.1_SSCC18392	-	SSCC18392
Streptomyces sp. PVA 94-07	1223307	PRJNA171846	171846	Terrabacteria group	Actinobacteria	7.10615	73.0632	chromosome:NZ_CM002273.1/CM002273.1; plasmid pPVA1:NZ_CM002274.1/CM002274.1; plasmid pPVA2:NZ_CM002275.1/CM002275.1	ASHE01	3	6196	5743	11/5/13	3/9/17	Chromosome	The Institute for Information Transmission Problems	SAMN02469391	GCA_000495755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/755/GCA_000495755.1_PVA94-07.23	-	PVA 94-07
Pseudomonas sp. bs2935	1761895	PRJEB16426	349348	Proteobacteria	Gammaproteobacteria	5.86885	60.2	chromosome I:NZ_LT629744.1/LT629744.1	-	1	5389	5213	10/21/16	7/29/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN04490210	GCA_900105085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/085/GCA_900105085.1_IMG-taxon_2639763196_annotated_assembly	-	BS2935
Elizabethkingia anophelis	1117645	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	3.95124	35.6	-	MAHT01	9	3606	3509	3/7/17	3/10/17	Contig	CDC	SAMN04482309	GCA_002023175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/175/GCA_002023175.1_ASM202317v1	-	F3543
Salinispora pacifica CNT148	1136422	PRJNA169828	169828	Terrabacteria group	Actinobacteria	5.06119	69.9	-	AZWJ01	57	4812	4529	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597240	GCA_000514675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/675/GCA_000514675.1_ASM51467v1	-	CNT148
Leptospira kirschneri str. 200801925	1193046	PRJNA167249	167249	Spirochaetes	Spirochaetia	4.50819	36.2	-	AKWK02	200	4980	4937	10/17/12	11/19/13	Contig	J. Craig Venter Institute	SAMN01036858	GCA_000306355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/355/GCA_000306355.2_gls454127v02	-	200801925
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28353	32.4	chromosome:AP017584.1	-	1	-	-	1/24/17	1/27/17	Chromosome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053856	GCA_002357055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/055/GCA_002357055.1_ASM235705v1	-	HH-12
Leclercia adecarboxylata	83655	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.59638	55.7	-	DDPH01	85	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06452794	GCA_002352845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/845/GCA_002352845.1_ASM235284v1	28894102	-
Mycobacterium chelonae	1774	PRJNA323571	323571	Terrabacteria group	Actinobacteria	4.93913	64.1	-	MAEU01	45	4828	4673	3/3/17	3/6/17	Contig	LNCC	SAMN05186773	GCA_002013315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/315/GCA_002013315.1_ASM201331v1	-	96-1728
Geobacillus sp. BCO2	1547578	PRJNA261745	261745	Terrabacteria group	Firmicutes	3.41703	52.2	-	LJAJ01	154	4700	4649	9/18/15	9/18/15	Contig	Microbial Gene Research and Resources Facility	SAMN03075634	GCA_001294475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/475/GCA_001294475.1_ASM129447v1	-	BCO2
Streptococcus sobrinus TCI-373	1074081	PRJNA71929	71929	Terrabacteria group	Firmicutes	2.06059	43.5	-	AGHD01	320	2054	1853	10/6/11	3/30/17	Contig	JCVI	SAMN02436343	GCA_000228345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/345/GCA_000228345.2_SMUT2-NEX_10-373	-	TCI-373
Enterococcus hirae	1354	PRJEB8304	276434	Terrabacteria group	Firmicutes	2.50137	38.8	-	CDRM01	1380	-	-	2/24/15	2/24/15	Contig	CGS-GL	SAMEA3218007	GCA_000944155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/155/GCA_000944155.1_1g9A_assembly	-	1g9A
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.73259	66.5	-	LOUI01	137	8117	7666	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449170	GCA_001522815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/815/GCA_001522815.1_ASM152281v1	-	INT3-BP121
Legionella pneumophila subsp. pneumophila	91891	PRJNA67919	67919	Proteobacteria	Gammaproteobacteria	3.49254	38.4	chromosome:NC_018140.1/FQ958211.1	-	1	3191	3036	7/11/12	3/23/17	Complete Genome	Genoscope	SAMEA3138424	GCA_000306845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/845/GCA_000306845.1_ASM30684v1	-	HL06041035
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96582	64.1	-	FSBO01	16	4904	4737	12/14/16	3/21/17	Contig	SC	SAMEA2068809	GCA_900132345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/345/GCA_900132345.1_10665_4_66	-	321
Aeromonas veronii bv. sobria	114517	PRJEB7051	267822	Proteobacteria	Gammaproteobacteria	4.73561	58.4	-	CDBQ01	72	4340	4110	11/24/14	4/3/17	Scaffold	UCONNMISEQ	SAMEA2752397	GCA_000820385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/385/GCA_000820385.1_PRJEB7051	-	LMG 13067
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.24284	54.8	-	JZYI01	81	5184	4962	3/19/15	4/6/17	Contig	JCVI	SAMN03283649	GCA_000957275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/275/GCA_000957275.1_ASM95727v1	-	42193
Xanthomonas perforans	442694	PRJNA276689	276689	Proteobacteria	Gammaproteobacteria	5.32212	64.6	-	JZWB01	264	4792	4448	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03379915	GCA_001009955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/955/GCA_001009955.1_ASM100995v1	26089818	TB9
Streptococcus pseudopneumoniae	257758	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.09444	39.7	-	JUUO01	142	2141	1968	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197956	GCA_001074975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/975/GCA_001074975.1_ASM107497v1	26230489	75_SPSE
Kingella kingae KK128	1305778	PRJEB1630	194504	Proteobacteria	Betaproteobacteria	1.99301	46.6	-	CBSS01	1	1888	1625	9/11/13	4/2/17	Scaffold	URMITE	SAMEA2272776	GCA_000470515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/515/GCA_000470515.1_KK128	-	KK128
Vibrio anguillarum	55601	PRJNA267042	267042	Proteobacteria	Gammaproteobacteria	4.25893	44.7058	chromosome I:CP010082.1; chromosome II:CP010083.1; plasmid pJM1:CP016255.1	-	3	3682	3555	2/7/17	2/7/17	Chromosome	University of Copenhagen	SAMN03177463	GCA_001990045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/045/GCA_001990045.1_ASM199004v1	-	-
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.9271	55.1	-	JUID01	76	4864	4620	12/16/14	3/25/17	Contig	JCVI	SAMN03012819	GCA_000802845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/845/GCA_000802845.1_SPADES_assembly_of_Enterobacter_cloacae_ND9	-	ND9
Streptococcus parasanguinis	1318	PRJNA267549	267549	Terrabacteria group	Firmicutes	4.33776	52.2	-	JVKQ01	505	-	-	7/10/15	7/13/16	Scaffold	University of Washington	SAMN03197538	GCA_001072395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/395/GCA_001072395.1_ASM107239v1	26230489	348_SPAR
Fusobacterium necrophorum D12	556263	PRJNA32485	32485	Fusobacteria	Fusobacteriia	1.96093	35.2	-	ACDG02	17	1978	1833	3/2/09	1/9/14	Scaffold	Broad Institute	SAMN02463712	GCA_000158295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/295/GCA_000158295.2_Fuso_sp_D12_V2	-	D12
Citrobacter freundii	546	PRJNA252011	252011	Proteobacteria	Gammaproteobacteria	5.25457	51.5	-	JRTM01	145	5238	4982	10/26/15	4/4/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872795	GCA_001413295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/295/GCA_001413295.1_ASM141329v1	25501822	RU2 BHI19
Leptospira santarosai	28183	PRJNA311750	311750	Spirochaetes	Spirochaetia	3.98396	41.8	-	LSSR01	95	3983	3658	3/9/16	4/5/17	Contig	Northern Arizona University	SAMN04488388	GCA_001584305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/305/GCA_001584305.1_ASM158430v1	27151788	C216
Pantoea ananatis	553	PRJNA280811	280811	Proteobacteria	Gammaproteobacteria	4.14656	53.6	-	LBFU01	239	3944	3320	5/7/15	5/7/15	Contig	Junagadh Agricultural University	SAMN03470247	GCA_001005095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/095/GCA_001005095.1_ASM100509v1	-	MR5
Legionella pneumophila 2300/99 Alcoy	423212	PRJNA18743	18743	Proteobacteria	Gammaproteobacteria	3.51633	38.4	chromosome:NC_014125.1/CP001828.1	-	1	3207	3061	5/3/10	3/22/17	Complete Genome	"Valencia University and Public Health Research Superior Center (CSISP) of Valencia's Goverment, Spain"	SAMN02604292	GCA_000092625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/625/GCA_000092625.1_ASM9262v1	20236513	2300/99 Alcoy
Acinetobacter pittii	48296	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.98198	38.9	-	LLGI01	320	3995	3718	10/27/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145700	GCA_001415175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/175/GCA_001415175.1_ASM141517v1	-	ABBL078
Xanthomonas euvesicatoria	456327	PRJNA275497	275497	Proteobacteria	Gammaproteobacteria	5.41834	64.4	-	JZLY01	194	4912	4489	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03349331	GCA_001008915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/915/GCA_001008915.1_v1	26089818	678
Pseudomonas amygdali pv. myricae	129139	PRJNA287460	287460	Proteobacteria	Gammaproteobacteria	6.02878	58.2	-	LIHY01	203	5726	5189	1/25/16	4/4/17	Contig	University of Edinburgh	SAMN03992212	GCA_001535805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/805/GCA_001535805.1_ASM153580v1	27145446	CFBP 2897
Brucella sp. CMUL 014	1905696	PRJNA344957	344957	Proteobacteria	Alphaproteobacteria	3.2913	57.2	-	MKPX01	34	3365	3136	1/6/17	4/16/17	Contig	LAU	SAMN05853689	GCA_001937915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/915/GCA_001937915.1_ASM193791v1	-	CMUL 014
Enterobacter asburiae	61645	PRJNA278427	278427	Proteobacteria	Gammaproteobacteria	4.71616	55.4	-	LDQD01	102	4542	4331	12/22/15	4/5/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401399	GCA_001475955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/955/GCA_001475955.1_ASM147595v1	26793183	NS23
Streptococcus pyogenes MGAS10270	370552	PRJNA16364	16364	Terrabacteria group	Firmicutes	1.92825	38.4	chromosome:NC_008022.1/CP000260.1	-	1	1990	1829	5/4/06	3/22/17	Complete Genome	Lab of Human Bacterial Pathogenesis	SAMN02603502	GCA_000013505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/505/GCA_000013505.1_ASM1350v1	16636287	MGAS10270
Vibrio alginolyticus	663	PRJNA280486	280486	Proteobacteria	Gammaproteobacteria	5.15564	44.4	-	LVYF01	62	4806	4621	4/8/16	4/5/17	Contig	"Technische Universitaet Dresden, Medical Faculty 'Carl Gustav Carus'"	SAMN03457195	GCA_001617475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/475/GCA_001617475.1_ASM161747v1	-	VN-7501
Pseudoalteromonas sp. UCD-33C	1716175	PRJNA295757	295757	Proteobacteria	Gammaproteobacteria	4.47175	41.3	-	LJTB01	48	4085	3930	10/5/15	4/11/17	Contig	UC Davis	SAMN04088184	GCA_001306895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/895/GCA_001306895.1_Pseudoalteromonas_sp._UCD-33C	26893412	UCD-33C
Pseudomonas savastanoi pv. glycinea str. race 4	875330	PRJNA33197	33197	Proteobacteria	Gammaproteobacteria	6.2301	57.5	-	ADWY01	3012	8059	8035	6/22/10	1/8/14	Scaffold	University of North Carolina at Chapel Hill	SAMN02471322	GCA_000143005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/143/005/GCA_000143005.1_ASM14300v1	21799664	race 4
Pseudomonas syringae pv. maculicola	59511	PRJNA286819	286819	Proteobacteria	Gammaproteobacteria	6.43579	58.4	-	LGLE01	44	6117	5813	9/18/15	4/4/17	Scaffold	University of Toronto	SAMN03837764	GCA_001294305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/305/GCA_001294305.1_PmaM4a	-	M4a
Achromobacter xylosoxidans	85698	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	6.59865	67.7	-	JUZX01	803	6262	5687	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197817	GCA_001057595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/595/GCA_001057595.1_ASM105759v1	26230489	617_AXYL
Streptococcus oralis subsp. oralis	1891914	PRJNA274768	274768	Terrabacteria group	Firmicutes	1.90015	41.2	-	JYGM01	11	1933	1790	3/23/15	4/3/17	Contig	University at Buffalo	SAMN03334896	GCA_000959945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/945/GCA_000959945.1_ASM95994v1	25999552	COL85/1862
Acinetobacter nosocomialis	106654	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.17031	38.7	-	JVGT01	107	4037	3784	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197639	GCA_001056825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/825/GCA_001056825.1_ASM105682v1	26230489	446_ABAU
Klebsiella variicola	244366	PRJNA353361	353361	Proteobacteria	Gammaproteobacteria	5.8489	57	-	MSZI01	81	5905	5632	5/9/17	5/22/17	Contig	New Jersey Medical School-Rutgers University	SAMN06200339	GCA_002119865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/865/GCA_002119865.1_ASM211986v1	-	KP007
Rhodococcus hoagii	43767	PRJNA316970	316970	Terrabacteria group	Actinobacteria	5.19656	68.8	-	LWHS01	41	4838	4719	4/18/17	6/6/17	Contig	The University of Edinburgh	SAMN04631996	GCA_002095175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/175/GCA_002095175.1_ASM209517v1	27638249	PAM1216
Staphylococcus capitis	29388	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.56104	32.9	-	JUXY01	40	2451	2369	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197868	GCA_001066795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/795/GCA_001066795.1_ASM106679v1	26230489	664.rep2_SAUR
Staphylococcus hominis	1290	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.24527	31.4	-	JVED01	53	2206	2128	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197707	GCA_001073185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/185/GCA_001073185.1_ASM107318v1	26230489	513_SHAE
Lactobacillus paracasei subsp. paracasei CNCM I-4270	1256202	PRJNA178429	178429	Terrabacteria group	Firmicutes	2.98735	46.2	-	ANJX01	461	3250	2689	6/11/13	4/10/17	Contig	Danone Research	SAMN02469729	GCA_000410275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/275/GCA_000410275.1_ASM41027v1	23894338	CNCM I-4270
Gardnerella vaginalis 315-A	879307	PRJNA52049	52049	Terrabacteria group	Actinobacteria	1.65328	41.4	-	AFDI01	13	1414	1290	5/20/11	3/30/17	Contig	J. Craig Venter Institute	SAMN00138210	GCA_000214315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/315/GCA_000214315.2_ASM21431v2	-	315-A
Aggregatibacter actinomycetemcomitans serotype c str. SCC2302	907493	PRJNA53941	53941	Proteobacteria	Gammaproteobacteria	2.03459	44.5	-	AEJR02	26	2040	1868	9/29/11	4/4/17	Scaffold	University of Southern California School of Dentistry	SAMN02471946	GCA_000226855.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/855/GCA_000226855.3_AaSCC2302v2.0	23194436	SCC2302
Lactobacillus crispatus	47770	PRJNA379934	379934	Terrabacteria group	Firmicutes	2.06954	36.6	-	NARH01	129	2125	1868	4/12/17	4/16/17	Scaffold	Loyola University Chicago	SAMN06624125	GCA_002088015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/015/GCA_002088015.1_ASM208801v1	-	ATCC 33820
Pectobacterium carotovorum subsp. brasiliense	180957	PRJNA255894	255894	Proteobacteria	Gammaproteobacteria	4.76595	52.1	-	JPSM01	25	4339	4176	8/6/14	4/2/17	Scaffold	Canadian Food Inspection Agency	SAMN02947962	GCA_000738115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/115/GCA_000738115.1_ASM73811v1	25858837	CFIA1001
Streptococcus equinus	1335	PRJEB17497	351654	Terrabacteria group	Firmicutes	1.91251	37.1	-	FOYC01	11	1846	1788	10/31/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216422	GCA_900115895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/895/GCA_900115895.1_IMG-taxon_2654588207_annotated_assembly	-	SI
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.73865	47.6	-	MECA01	68	3463	3296	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320426	GCA_001883145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/145/GCA_001883145.1_ASM188314v1	-	12/3871-3K
Escherichia albertii	208962	PRJDB3047	301492	Proteobacteria	Gammaproteobacteria	5.02818	49.4	-	BBVZ01	85	5200	4802	11/6/15	2/25/17	Scaffold	University of Miyazaki	SAMD00026638	GCA_001514985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/985/GCA_001514985.1_ASM151498v1	26537224	HIPH08472
Flavobacterium psychrophilum	96345	PRJEB21067	396411	FCB group	Bacteroidetes/Chlorobi group	2.77866	32.4	-	FYCB01	67	2554	2455	7/29/17	8/7/17	Contig	INRA	SAMEA104125237	GCA_900186365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/365/GCA_900186365.1_FPDK150_V1	-	DK150
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.142	67.5	-	LOVI01	91	6455	6112	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449198	GCA_001523425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/425/GCA_001523425.1_ASM152342v1	-	MSMB1182
Aeromonas hydrophila	644	PRJNA264123	264123	Proteobacteria	Gammaproteobacteria	4.96772	61	-	JRWS01	164	4654	4415	11/14/14	4/2/17	Contig	University of Malaya	SAMN03113148	GCA_000783255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/255/GCA_000783255.1_ASM78325v1	25555739	M013
Pseudomonas stutzeri	316	PRJNA380483	380483	Proteobacteria	Gammaproteobacteria	4.4778	64.1	-	NCKS02	298	4380	4007	4/17/17	5/3/17	Contig	Central South University	SAMN06644890	GCA_002093045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/045/GCA_002093045.2_ASM209304v2	-	LH-42
Paenibacillus polymyxa	1406	PRJNA348753	348753	Terrabacteria group	Firmicutes	5.31349	45.5	-	DFNW01	20	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452315	GCA_002376225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/225/GCA_002376225.1_ASM237622v1	28894102	-
Vibrio sp. ECSMB14105	1638951	PRJNA280145	280145	Proteobacteria	Gammaproteobacteria	5.0969	43.5	-	LAUL01	68	4519	4343	4/14/15	4/10/17	Contig	shanghai ocean university	SAMN03457170	GCA_000972275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/275/GCA_000972275.1_ASM97227v1	-	ECSMB14105
Staphylococcus saprophyticus	29385	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.62812	33	-	LMYU01	33	2579	2406	9/28/16	4/5/17	Scaffold	Tufts University	SAMN04244236	GCA_001747315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/315/GCA_001747315.1_ASM174731v1	-	9325
Streptococcus sanguinis	1305	PRJEB7884	272990	Terrabacteria group	Firmicutes	2.30861	43.3	-	CDMW01	1	2336	2162	1/19/15	4/3/17	Scaffold	IMPERIAL COLLEGE LONDON	SAMEA3207422	GCA_001078705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/705/GCA_001078705.1_Streptococcus_sanguinis_2908	-	2908
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.25581	36.7	-	LPRY01	18	2404	2261	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305159	GCA_001560385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/385/GCA_001560385.1_NG05B_C06_02	-	NG05B_C06_02
Bifidobacterium breve	1685	PRJDB4597	325619	Terrabacteria group	Actinobacteria	2.3738	58.7	-	BCXP01	27	2100	1890	6/10/16	4/5/17	Contig	Yakult Central Institute	SAMD00047600	GCA_001685785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/785/GCA_001685785.1_ASM168578v1	27340092	BR-15
Mycobacterium abscessus 47J26	1087483	PRJNA73255	73255	Terrabacteria group	Actinobacteria	4.87405	64.2	-	AGQU01	17	4901	4766	10/20/11	5/19/17	Contig	University of Birmingham	SAMN02471593	GCA_000231155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/155/GCA_000231155.2_ASM23115v2	22207751	47J26
Moraxella catarrhalis	480	PRJNA297370	297370	Proteobacteria	Gammaproteobacteria	2.17043	43.7	-	LXHD01	45	2046	1868	6/3/16	4/5/17	Contig	Drexel University College of Medicine	SAMN04122866	GCA_001656335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/335/GCA_001656335.1_ASM165633v1	26912404	Z7547
Lactobacillus salivarius	1624	PRJNA321782	321782	Terrabacteria group	Firmicutes	2.0913	32.8	-	LXZF01	107	2095	1948	9/12/17	9/14/17	Contig	Seoul National University	SAMN05003805	GCA_002289785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/785/GCA_002289785.1_ASM228978v1	-	KLW002
Klebsiella oxytoca	571	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.2475	55.4	-	JWBI01	256	6193	5841	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197104	GCA_001052235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/235/GCA_001052235.1_ASM105223v1	26230489	1148_KOXY
Cronobacter sakazakii	28141	PRJNA287482	287482	Proteobacteria	Gammaproteobacteria	4.36904	57	-	LGRL01	26	4230	4014	4/17/17	4/26/17	Scaffold	" National Institute for Communicable Disease Control and Prevention,China CDC"	SAMN03782454	GCA_002093925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/925/GCA_002093925.1_ASM209392v1	-	HB04
Enterobacter cloacae	550	PRJEB12512	309818	Proteobacteria	Gammaproteobacteria	5.15935	56	chromosome I:NZ_LT160614.1/LT160614.1	FIZE01	1	5516	4385	2/12/16	3/27/17	Chromosome	URMITE	SAMEA3856670	GCA_900050915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/915/GCA_900050915.1_Enterobacter_cloacae_NH52	-	NH52
Proteus mirabilis	584	PRJNA266009	266009	Proteobacteria	Gammaproteobacteria	3.95435	38.9	-	JSUP01	146	3699	3530	12/8/15	4/4/17	Contig	Trinity College Dublin	SAMN03154486	GCA_001462385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/385/GCA_001462385.1_ASM146238v1	26865983	PM593
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.55039	32.5	-	CUDW01	78	2540	2419	3/31/15	3/26/17	Contig	SC	SAMEA1035075	GCA_001227705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/705/GCA_001227705.1_7067_4_62	-	51-41
Propionibacterium acnes HL083PA1	765087	PRJNA49207	49207	Terrabacteria group	Actinobacteria	2.4775	60.1	-	ADZC01	18	2511	2383	7/29/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189240	GCA_000144225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/225/GCA_000144225.1_ASM14422v1	-	HL083PA1
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.86786	66.9	-	LOZI01	91	6276	5916	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449318	GCA_001527445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/445/GCA_001527445.1_ASM152744v1	-	BAA-248
Burkholderia sp. H160	516466	PRJNA29197	29197	Proteobacteria	Betaproteobacteria	7.89335	62.9	-	ABYL01	310	7432	6855	10/15/08	5/18/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN00001867	GCA_000173575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/575/GCA_000173575.1_ASM17357v1	23209196	H160
Campylobacter coli 90-3	887286	PRJNA52709	52709	Proteobacteria	delta/epsilon subdivisions	1.76538	31.2	-	AIMJ01	121	1851	1752	3/16/12	3/15/17	Contig	Cornell University	SAMN02428936	GCA_000253435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/435/GCA_000253435.2_ASM25343v2	23279811	90-3
Lactobacillus brevis	1580	PRJEB17528	359565	Terrabacteria group	Firmicutes	2.71665	45.4	-	FPCO01	192	2811	2537	12/31/16	5/31/17	Contig	Microbiology and Fermentation	SAMEA4527922	GCA_900116995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/995/GCA_900116995.1_ASM90011699v1	-	-
Mannheimia haemolytica	75985	PRJNA181191	181191	Proteobacteria	Gammaproteobacteria	2.60052	41.1	-	LFYA01	134	2688	2498	3/23/16	4/5/17	Contig	Agriculture and Agri-Food Canada	SAMN03840565	GCA_001596655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/655/GCA_001596655.1_ASM159665v1	26926339	L038A
Streptococcus pyogenes MGAS6180	319701	PRJNA13887	13887	Terrabacteria group	Firmicutes	1.89757	38.4	chromosome:NC_007296.1/CP000056.1	-	1	1945	1803	8/4/05	3/22/17	Complete Genome	Lab of Human Bacterial Pathogenesis	SAMN02603499	GCA_000012165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/165/GCA_000012165.1_ASM1216v1	16088825	MGAS6180
Serratia marcescens MC459	1333581	PRJNA203055	203055	Proteobacteria	Gammaproteobacteria	5.37306	59.1	-	ATOK01	129	5210	4991	7/3/13	3/24/17	Scaffold	The Genome Institute	SAMN02436762	GCA_000418895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/895/GCA_000418895.1_S_marcescensMC459-1.0	-	MC459
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.38639	39.5	-	FPIK01	683	1125	1014	5/10/17	6/9/17	Scaffold	WTSI	SAMEA893067	GCA_900118605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/605/GCA_900118605.1_4880_2_8	-	83/12
Leuconostoc mesenteroides subsp. cremoris	33965	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.66343	38.1	-	MPEB01	113	1801	1433	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981474	GCA_002092385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/385/GCA_002092385.1_ASM209238v1	28217118	LMGCF12
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.07842	41.5	-	JJPC01	167	3503	3290	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708983	GCA_000979505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/505/GCA_000979505.1_gtlEnvA5udCFS	25756680	3.F.A.1B.1
Dehalococcoides mccartyi	61435	PRJNA320716	320716	Terrabacteria group	Chloroflexi	1.3573	48.5	-	LZFJ01	8	1451	1369	7/1/16	7/1/16	Contig	Stanford University	SAMN05190594	GCA_001678055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/055/GCA_001678055.1_ASM167805v1	-	-
Yersinia enterocolitica IP 10393	1243181	PRJNA177695	177695	Proteobacteria	Gammaproteobacteria	4.46321	47	-	CAOV01	12	4171	3899	12/17/12	3/23/17	Contig	Institut Pasteur	SAMEA3138430	GCA_000330605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/605/GCA_000330605.1_ASM33060v1	23469338	IP 10393
Legionella pneumophila str. Lens	297245	PRJNA13126	13126	Proteobacteria	Gammaproteobacteria	3.40552	38.4	chromosome:NC_006369.1/CR628337.1; plasmid pLPL:NC_006366.1/CR628339.1	-	2	3074	2909	10/3/04	3/23/17	Complete Genome	Institut Pasteur	SAMEA3138253	GCA_000048665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/048/665/GCA_000048665.1_ASM4866v1	15467720	Lens
[Haemophilus] ducreyi	730	PRJNA270894	270894	Proteobacteria	Gammaproteobacteria	1.5741	38.1	chromosome:CP011231.1	-	1	1522	1363	6/30/15	7/23/15	Chromosome	Indiana University School of Medicine	SAMN03271830	GCA_001043495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/495/GCA_001043495.1_ASM104349v1	-	GU9
Corynebacterium diphtheriae	1717	PRJNA342907	342907	Terrabacteria group	Actinobacteria	2.43713	53.5	-	MJAQ01	76	2366	2083	9/22/16	4/21/17	Contig	"CMC, Vellore"	SAMN05771005	GCA_001742085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/085/GCA_001742085.1_ASM174208v1	-	TH1337
Sinorhizobium meliloti WSM1022	1041157	PRJNA78233	78233	Proteobacteria	Alphaproteobacteria	6.64157	62.2	-	AZNW01	121	6657	6122	12/17/13	4/2/17	Scaffold	JGI	SAMN02597176	GCA_000510665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/510/665/GCA_000510665.1_ASM51066v1	-	WSM1022
Bordetella bronchiseptica MBORD707	1331231	PRJNA202143	202143	Proteobacteria	Betaproteobacteria	5.13809	68.3	-	JGXR01	56	4875	4747	5/12/14	4/2/17	Contig	JCVI	SAMN02231432	GCA_000689875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/875/GCA_000689875.1_gbb35v01	25908122	MBORD707
Legionella pneumophila subsp. pneumophila	91891	PRJNA67921	67921	Proteobacteria	Gammaproteobacteria	3.61769	38.3875	chromosome:NC_018139.1/FQ958210.1; plasmid pLELO:NC_018141.1/FQ958212.1	-	2	3331	3125	7/11/12	3/23/17	Complete Genome	Genoscope	SAMEA3138425	GCA_000306865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/865/GCA_000306865.1_ASM30686v1	-	Lorraine
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31315	57.2358	chromosome 1:NZ_CP018480.1/CP018480.1; chromosome 2:NZ_CP018481.1/CP018481.1	-	2	3375	3151	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932954	GCA_002191255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/255/GCA_002191255.1_ASM219125v1	28388689	BwIM_ALB_46
Lactobacillus rhamnosus PEL5	1457395	PRJNA237053	237053	Terrabacteria group	Firmicutes	2.89703	46.7	-	JDFQ01	71	2962	2764	6/26/14	4/2/17	Contig	Helsinki University	SAMN02602920	GCA_000712505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/505/GCA_000712505.1_PEL5	25032833	PEL5
Pasteurella multocida 1500C	1298929	PRJNA190878	190878	Proteobacteria	Gammaproteobacteria	2.27409	40.4	-	AROA01	350	2185	2054	6/18/13	4/1/17	Contig	Moredun Research Institute	SAMN02470560	GCA_000412125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/125/GCA_000412125.1_1500C	-	1500C
[Haemophilus] parasuis	738	PRJNA301181	301181	Proteobacteria	Gammaproteobacteria	2.21245	39.9	-	MNAT01	112	2158	1973	1/6/17	4/6/17	Scaffold	Chinese Academy of Agricultural Sciences	SAMN04230859	GCA_001938285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/285/GCA_001938285.1_ASM193828v1	-	HPS4
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12744	41.2	-	CWFZ01	76	2042	1875	6/23/15	3/26/17	Contig	SC	SAMEA1032769	GCA_001175345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/345/GCA_001175345.1_6817_2_73	-	EQUI0026
Bifidobacterium bifidum JCM 1254	398514	PRJDB801	243712	Terrabacteria group	Actinobacteria	2.19002	62.6	-	BBBT01	238	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000434	GCA_001311705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/705/GCA_001311705.1_ASM131170v1	-	JCM 1254
Stenotrophomonas maltophilia	40324	PRJNA260977	260977	Proteobacteria	Gammaproteobacteria	4.63789	66.3	-	JRJA01	127	4270	4129	9/26/14	3/24/17	Contig	University of Huddersfield	SAMN03067892	GCA_000758465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/465/GCA_000758465.1_ASM75846v1	25883296	53
Bacillus amyloliquefaciens	1390	PRJNA259605	259605	Terrabacteria group	Firmicutes	3.9211	46.5	-	JQNZ01	21	3866	3670	9/8/14	4/2/17	Contig	Huazhong Agricultural University	SAMN03009691	GCA_000750045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/045/GCA_000750045.1_ASM75004v1	-	X1
Bifidobacterium animalis subsp. animalis MCC 0483	1365955	PRJNA215971	215971	Terrabacteria group	Actinobacteria	2.17604	60.1	-	AWFK01	27	1887	1729	8/11/15	4/3/17	Scaffold	"Food Science and Technology Institute, Morinaga Milk Industry Co., Ltd"	SAMN03978806	GCA_001263945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/945/GCA_001263945.1_ASM126394v1	26236711	MCC 0483
Chlamydia psittaci 99DC5	1112251	PRJNA77075	77075	PVC group	Chlamydiae	1.20766	39.2	-	ATLC01	23	1085	1001	6/25/13	4/1/17	Scaffold	University of Maryland School of Medicine	SAMN00860247	GCA_000415785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/785/GCA_000415785.1_ASM41578v1	-	99DC5
Enterococcus faecium	1352	PRJNA292803	292803	Terrabacteria group	Firmicutes	3.41543	37.6392	chromosome:NZ_CP012465.1/CP012465.1; plasmid ISMMS_VRE8_p1:NZ_CP012467.1/CP012467.1; plasmid ISMMS_VRE8_p2:NZ_CP012468.1/CP012468.1; plasmid ISMMS_VRE8_p3:NZ_CP012466.1/CP012466.1; plasmid ISMMS_VRE8_p4:NZ_CP012469.1/CP012469.1; plasmid ISMMS_VRE8_p5:NZ_CP012470.1/CP012470.1	-	6	3588	3325	9/7/16	4/17/17	Chromosome	Mount Sinai School of Medicine	SAMN03988626	GCA_001721085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/085/GCA_001721085.1_ASM172108v1	28301471	ISMMS_VRE_8
Neisseria gonorrhoeae	485	PRJNA400361	400361	Proteobacteria	Betaproteobacteria	2.27094	52.5	-	NTCT01	340	2810	2119	9/11/17	9/11/17	Scaffold	State Research Center of Dermatovenereology and Cosmetology (CNIKVI)	SAMN07566723	GCA_002289125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/125/GCA_002289125.1_ASM228912v1	-	20/15/004
Streptococcus mutans TCI-170	1074138	PRJNA72025	72025	Terrabacteria group	Firmicutes	1.89949	36.8	-	AGLA01	86	1896	1805	10/6/11	3/22/17	Contig	JCVI	SAMN02436605	GCA_000229185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/185/GCA_000229185.2_SMUT5-NEX_7-170	-	TCI-170
Borrelia garinii IPT115	1408844	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.02957	28.3	-	AYAT01	565	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378811	GCA_000501155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/155/GCA_000501155.1_BorGarIPT115	-	IPT115
Enterococcus faecalis TX0309B	749504	PRJNA47163	47163	Terrabacteria group	Firmicutes	3.10797	37.2	-	AEBO01	69	3238	3097	8/31/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189111	GCA_000147575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/575/GCA_000147575.1_ASM14757v1	-	TX0309B
Brucella suis F8/06-1	1169242	PRJNA173537	173537	Proteobacteria	Alphaproteobacteria	3.3209	57.2	-	AQLG01	18	3385	3156	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN00839734	GCA_000371285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/285/GCA_000371285.1_Bruc_suis_F8_06-1_V1	-	F8/06-1
Clavibacter michiganensis subsp. michiganensis	33013	PRJNA331193	331193	Terrabacteria group	Actinobacteria	3.31468	72.7	-	MDHB01	6	4096	4039	5/19/17	5/19/17	Contig	University of California	SAMN05439589	GCA_002150925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/925/GCA_002150925.1_ASM215092v1	-	CASJ001
Rhizobium leguminosarum bv. viciae TOM	935553	PRJNA80887	80887	Proteobacteria	Alphaproteobacteria	7.35767	60.8	-	AQUC01	6	7192	6813	4/19/13	5/19/17	Contig	JGI	SAMN02261293	GCA_000372205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/205/GCA_000372205.1_ASM37220v1	-	TOM
Treponema pallidum subsp. pallidum	161	PRJNA322283	322283	Spirochaetes	Spirochaetia	1.13918	52.8	chromosome:NZ_CP016055.1/CP016055.1	-	1	1065	1001	8/25/16	4/5/17	Chromosome	"National Institute of Health, Portugal"	SAMN05150382	GCA_001713055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/055/GCA_001713055.1_ASM171305v1	-	PT_SIF1135
Borrelia burgdorferi IPT93	1408877	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.2386	28.3	-	AYCA01	113	1280	771	12/3/13	4/2/17	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378844	GCA_000502075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/075/GCA_000502075.1_BorBurgIPT93	-	IPT93
Burkholderia multivorans	87883	PRJEB12786	382509	Proteobacteria	Betaproteobacteria	6.1574	67.3	-	FKJP01	13	5861	5593	4/11/17	7/9/17	Contig	LM-UGent	SAMEA3876907	GCA_900079435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/435/GCA_900079435.1_ASM90007943v1	-	-
Clostridium botulinum	1491	PRJNA259755	259755	Terrabacteria group	Firmicutes	3.91534	27.3	-	JQOJ01	150	3595	3413	9/8/14	3/24/17	Scaffold	Bureau of Food Surveillance and Science Integration	SAMN03012839	GCA_000750065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/065/GCA_000750065.1_ASM75006v1	25377702	DB-2
Vibrio fischeri EM17	1367487	PRJNA212806	212806	Proteobacteria	Gammaproteobacteria	3.74489	39.1	-	AUUW01	3765	-	-	6/8/17	6/8/17	Contig	University of New Mexico	SAMN06226650	GCA_002179655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/655/GCA_002179655.1_ASM217965v1	-	EM17
Porphyromonas gingivalis	837	PRJEB10280	362716	FCB group	Bacteroidetes/Chlorobi group	2.32518	48.3	-	FUFG01	50	2090	1930	2/2/17	4/6/17	Scaffold	"Melbourne Dental School, University of Melbourne"	SAMEA3505347	GCA_900157275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/275/GCA_900157275.1_84-3	-	84_3
Anabaena sp. WA102	1647413	PRJNA282166	282166	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.78203	38.3841	chromosome:NZ_CP011456.1/CP011456.1; plasmid unnamed:NZ_CP011457.1/CP011457.1	-	2	5370	4927	9/1/15	4/6/17	Complete Genome	Oregon State University	SAMN03568000	GCA_001277295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/295/GCA_001277295.1_ASM127729v1	-	WA102
Lactobacillus fermentum	1613	PRJNA294944	294944	Terrabacteria group	Firmicutes	2.04336	51.8	-	LJFJ01	7	2012	1366	9/22/15	11/24/15	Contig	CSIR-Institute of Himalayan Bioresource Technology	SAMN04038470	GCA_001297025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/025/GCA_001297025.1_ASM129702v1	26543124	HFB3
Vibrio harveyi NBRC 15634 = ATCC 14126	1219071	PRJDB350	172319	Proteobacteria	Gammaproteobacteria	5.58364	44.9	-	BCUF01	189	5108	4975	2/23/16	4/5/17	Contig	National Institute of Technology and Evaluation	SAMD00046755	GCA_001591145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/145/GCA_001591145.1_ASM159114v1	-	NBRC 15634
Salinispora arenicola CNR921	1136429	PRJNA169835	169835	Terrabacteria group	Actinobacteria	5.45854	69.6	-	AZWF01	47	4973	4697	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597236	GCA_000514595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/595/GCA_000514595.1_ASM51459v1	-	CNR921
Lactobacillus casei	1582	PRJNA289062	289062	Terrabacteria group	Firmicutes	3.05336	46.4	-	LNQD01	58	3289	2821	12/17/15	4/4/17	Contig	"Teagasc, Moorepark"	SAMN03840869	GCA_001469115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/115/GCA_001469115.1_ASM146911v1	26941145	DPC6800
Coxiella burnetii RSA 493	227377	PRJEB4294	218957	Proteobacteria	Gammaproteobacteria	1.95694	42.5	-	CCNR01	67	2143	1803	8/22/14	4/2/17	Contig	URMITE	SAMEA2697688	GCA_000751935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/935/GCA_000751935.1_Coxiella_burnetii	-	-
Vibrio fischeri ES114	312309	PRJNA12986	12986	Proteobacteria	Gammaproteobacteria	4.27372	38.371	chromosome I:NC_006840.2/CP000020.2; chromosome II:NC_006841.2/CP000021.2; plasmid pES100:NC_006842.1/CP000022.1	-	3	3984	3814	2/11/05	8/3/16	Complete Genome	W.M. Keck Microbial Communities and Cell-signaling Program	SAMN02604303	GCA_000011805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/805/GCA_000011805.1_ASM1180v1	"1,570,329,418,366,730"	ES114
Vibrio parahaemolyticus IDH02189	1238211	PRJNA176646	176646	Proteobacteria	Gammaproteobacteria	5.10081	45.3	-	JAHD01	102	4903	4690	1/23/14	3/18/17	Scaffold	IGS	SAMN01923897	GCA_000522025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/025/GCA_000522025.2_vpEKP026	-	IDH02189
Aeromonas salmonicida subsp. salmonicida	29491	PRJNA264317	264317	Proteobacteria	Gammaproteobacteria	4.86756	58.4	-	MIIQ01	112	4705	4222	12/13/16	4/6/17	Contig	Universite Laval	SAMN05728467	GCA_001902045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/045/GCA_001902045.1_ASM190204v1	-	2009-157 K5
Streptococcus mitis	28037	PRJNA242568	242568	Terrabacteria group	Firmicutes	1.94458	40.3	-	JPGW01	14	1938	1743	7/8/14	4/2/17	Contig	Aarhus University	SAMN02698681	GCA_000724165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/165/GCA_000724165.1_ASM72416v1	25053789	SK271
Oenococcus oeni IOEB_9805	1428420	PRJNA229545	229545	Terrabacteria group	Firmicutes	1.84345	37.8	-	AZKE01	57	1892	1697	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02902408	GCA_000761725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/725/GCA_000761725.1_Oeoe_IOEB_9805_1.0	24901216	IOEB_9805
Xanthomonas oryzae pv. oryzae NAI8	1423889	PRJNA228925	228925	Proteobacteria	Gammaproteobacteria	4.34405	64.1	-	AYSX01	515	4152	3305	12/12/13	4/11/17	Contig	Colorado State University	SAMN02404518	GCA_000511585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/585/GCA_000511585.1_X._oryzae_pv._oryzae_NAI8	24837384	NAI8
Campylobacter fetus subsp. testudinum	1507806	PRJNA285153	285153	Proteobacteria	delta/epsilon subdivisions	1.79426	33.1	-	LFXD01	56	1813	1748	8/5/16	4/5/17	Contig	Utrecht University	SAMN03741770	GCA_001699365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/365/GCA_001699365.1_ASM169936v1	27333878	CF78.2
Legionella pneumophila	446	PRJNA324244	324244	Proteobacteria	Gammaproteobacteria	3.61599	38.3677	chromosome:NZ_CP016030.2/CP016030.2; plasmid unnamed:NZ_CP016031.1/CP016031.1	-	2	3321	3167	6/28/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05198688	GCA_001677075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/075/GCA_001677075.2_ASM167707v2	27563044	OLDA
Leptospira borgpetersenii	174	PRJNA257146	257146	Spirochaetes	Spirochaetia	3.89282	40	-	JQQX01	222	3750	3401	2/24/16	4/5/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947782	GCA_001569155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/155/GCA_001569155.1_ASM156915v1	26833181	56648
Lactobacillus delbrueckii subsp. jakobsenii ZN7a-9 = DSM 26046	1217420	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.74924	50.3	-	JQCG01	134	1755	1566	11/6/15	4/4/17	Scaffold	Shanghai Majorbio	SAMN02797789	GCA_001437485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/485/GCA_001437485.1_ASM143748v1	26415554	DSM 26046
Yersinia pseudotuberculosis	633	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.68658	47.5	-	CPWK01	135	4368	4131	3/22/15	4/3/17	Scaffold	SC	SAMEA859877	GCA_001104045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/045/GCA_001104045.1_4821_8_12	-	IH111554
Brucella abortus	235	PRJNA400357	400357	Proteobacteria	Alphaproteobacteria	3.82341	56.9062	chromosome 1:CP023233.1; chromosome 2:CP023234.1	-	2	3745	3294	9/12/17	9/12/17	Chromosome	IZSM-Portici	SAMN07572692	GCA_002291305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/305/GCA_002291305.1_ASM229130v1	-	21614
Legionella pneumophila str. Paris	297246	PRJNA13127	13127	Proteobacteria	Gammaproteobacteria	3.6355	38.3637	chromosome:NC_006368.1/CR628336.1; plasmid pLPP:NC_006365.1/CR628338.1	-	2	3326	3172	10/3/04	3/23/17	Complete Genome	Institut Pasteur	SAMEA3138252	GCA_000048645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/048/645/GCA_000048645.1_ASM4864v1	15467720	Paris
Streptococcus salivarius	1304	PRJNA320256	320256	Terrabacteria group	Firmicutes	2.26451	39.6	-	LXIL01	469	2265	1943	12/16/16	4/6/17	Contig	State University of Campinas	SAMN04933563	GCA_001907005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/005/GCA_001907005.1_ASM190700v1	-	39-09 S16
Shigella boydii	621	PRJNA288168	288168	Proteobacteria	Gammaproteobacteria	4.2919	50.7	-	LPTN01	461	4949	4011	12/15/16	2/26/17	Contig	"University of Maryland, School of Medicine"	SAMN04001693	GCA_001906185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/185/GCA_001906185.1_ASM190618v1	-	601143
Clostridioides difficile E23	1215081	PRJEB211	222731	Terrabacteria group	Firmicutes	4.01539	28.3	-	CAMY01	264	3703	3580	10/14/13	3/15/17	Scaffold	LPBA	SAMEA3138885	GCA_000530435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/435/GCA_000530435.1_E23	24482682	E23
Vibrio cholerae H1	1093790	PRJNA73829	73829	Proteobacteria	Gammaproteobacteria	4.08902	47.5207	chromosome 1:NZ_AKGH01000001.1/AKGH01000001.1; chromosome 2:NZ_AKGH01000002.1/AKGH01000002.1	AKGH01	2	3889	3702	6/29/12	3/23/17	Chromosome	Pacific Biosciences	SAMN02470784	GCA_000275645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/645/GCA_000275645.1_ASM27564v1	-	H1
Candidatus Pelagibacter ubique	198252	PRJEB9287	287342	Proteobacteria	Alphaproteobacteria	0.374567	28.4	-	CVSA01	61	-	-	6/17/15	6/17/15	Contig	UNIVERSITY OF CALIFORNIA - SAN DIEGO	SAMEA3368552	GCA_001179825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/825/GCA_001179825.1_CLC_assembled_contigs	-	SCGC AAA795-A08
Ralstonia solanacearum IPO1609	564066	PRJNA32087	32087	Proteobacteria	Betaproteobacteria	5.31852	66.2	-	CDGL01	10	4677	4223	11/15/14	4/3/17	Scaffold	Genoscope	SAMEA3158502	GCA_001050995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/995/GCA_001050995.1_ASM105099v1	-	IPO1609
Enterococcus faecium Aus0004	1155766	PRJNA86649	86649	Terrabacteria group	Firmicutes	3.01978	38.3424	chromosome:NC_017022.1/CP003351.1; plasmid AUS0004_p1:NC_017032.1/CP003352.1; plasmid AUS0004_p2:NC_017023.1/CP003353.1; plasmid AUS0004_p3:NC_017024.1/CP003354.1	-	4	3118	2919	3/1/12	3/23/17	Complete Genome	University of Melbourne	SAMN02604218	GCA_000250945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/945/GCA_000250945.1_ASM25094v1	22366422	Aus0004
Burkholderia mallei ATCC 10399	412021	PRJNA13944	13944	Proteobacteria	Betaproteobacteria	5.93808	68.4	-	AAHN02	63	6240	5783	6/9/05	5/18/17	Scaffold	TIGR	SAMN02435893	GCA_000152305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/305/GCA_000152305.1_ASM15230v1	-	ATCC 10399
Corynebacterium glutamicum	1718	PRJNA305675	305675	Terrabacteria group	Actinobacteria	3.2987	53.9	-	LOQT01	37	3084	2958	12/21/16	5/1/17	Contig	Shanghai Institutes for Biological Sciences (SIBS) of Chinese Academy of Sciences (CAS)	SAMN04331505	GCA_001912735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/735/GCA_001912735.1_ASM191273v1	28198668	AS 1.542
Bacillus pumilus	1408	PRJNA277404	277404	Terrabacteria group	Firmicutes	3.67101	41.6	-	LDUS01	27	3758	3644	6/30/15	4/3/17	Contig	University of Malaya	SAMN03392531	GCA_001043695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/695/GCA_001043695.1_ASM104369v1	-	LK12
Legionella pneumophila subsp. pneumophila LPE509	1312904	PRJNA174371	174371	Proteobacteria	Gammaproteobacteria	3.50771	38.3419	chromosome:NC_020521.1/CP003885.1; plasmid unnamed:NC_020522.1/CP003886.1	-	2	3205	3102	3/20/13	3/23/17	Complete Genome	"Zhongshan Hospital, Fudan University;  Department of Biological Sciences Purdue University"	SAMN02604344	GCA_000347615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/615/GCA_000347615.1_ASM34761v1	23792742	LPE509
Legionella fallonii LLAP-10	1212491	PRJEB7322	264513	Proteobacteria	Gammaproteobacteria	4.43489	38.3339	chromosome I:NZ_LN614827.1/LN614827.1; plasmid II:NZ_LN614828.1/LN614828.1; plasmid III:NZ_LN614829.1/LN614829.1	-	3	3761	3622	10/21/14	4/17/17	Complete Genome	INSTITUT PASTEUR	SAMEA2785663	GCA_000953135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/135/GCA_000953135.1_LFA	-	LLAP-10
Burkholderia cenocepacia	95486	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.48283	67.5	-	LOWV01	65	7041	6777	1/21/16	3/27/17	Contig	Northern Arizona University	SAMN03449245	GCA_001524105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/105/GCA_001524105.1_ASM152410v1	-	FL-6-2-30-S1-D2
Lactobacillus reuteri	1598	PRJNA342243	342243	Terrabacteria group	Firmicutes	2.08328	38.7	-	MIMK01	149	2092	1934	5/11/17	5/22/17	Contig	Seoul National University	SAMN05751485	GCA_002128585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/585/GCA_002128585.1_ASM212858v1	-	KLR2003
Streptococcus thermophilus DGCC7710	1268061	PRJNA213367	213367	Terrabacteria group	Firmicutes	1.79834	38.9	-	AWVZ01	17	1921	1655	11/29/13	4/11/17	Contig	DuPont Nutrition and Health	SAMN02469758	GCA_000500565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/565/GCA_000500565.1_DGCC7710v1	24256225	DGCC7710
Bacteroides fragilis str. 3783N1-2	1339309	PRJNA206152	206152	FCB group	Bacteroidetes/Chlorobi group	5.28779	43.7	-	JGCS01	449	4749	4390	3/20/14	4/3/17	Contig	IGS	SAMN02314527	GCA_000598325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/325/GCA_000598325.1_ASM59832v1	-	3783N1-2
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.57643	50.7	-	CXOF01	369	5154	4382	7/19/15	2/24/17	Contig	SC	SAMEA2164643	GCA_001250355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/355/GCA_001250355.1_8290_5_2	-	124521
Legionella pneumophila	446	PRJNA323476	323476	Proteobacteria	Gammaproteobacteria	3.50407	38.3271	chromosome:NZ_CP015941.1/CP015941.1; plasmid unamed2:NZ_CP015943.1/CP015943.1; plasmid unnamed1:NZ_CP015942.1/CP015942.1	-	3	3191	3086	10/6/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05180030	GCA_001753085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/085/GCA_001753085.1_ASM175308v1	27684472	C9_S
Bacillus licheniformis	1402	PRJNA316783	316783	Terrabacteria group	Firmicutes	4.44876	45.6	-	LWKD01	143	4708	4470	11/10/16	4/5/17	Contig	CSIR-Institute of Microbial Technology	SAMN04590051	GCA_001876555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/555/GCA_001876555.1_ASM187655v1	-	RE1.59
Vibrio vulnificus	672	PRJNA276162	276162	Proteobacteria	Gammaproteobacteria	5.11895	46.5	-	JZER01	140	4756	4518	3/23/15	4/3/17	Contig	Hankuk University of Foreign Studies	SAMN03371455	GCA_000959745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/745/GCA_000959745.1_ASM95974v1	-	SC9613
Pseudomonas syringae UB246	1357270	PRJNA211378	211378	Proteobacteria	Gammaproteobacteria	6.26822	56.8	-	AVEQ01	410	5584	5415	8/20/13	3/24/17	Scaffold	University of Arizona	SAMN02230600	GCA_000452865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/865/GCA_000452865.1_UB246_042011_1.0	24459267	UB246
Streptococcus suis YS49	1214205	PRJNA171467	171467	Terrabacteria group	Firmicutes	2.40826	41.3	-	ALMT01	133	2417	2225	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469566	GCA_000440075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/075/GCA_000440075.1_version1	-	YS49
'Nostoc azollae' 0708	551115	PRJNA30807	30807	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.48614	38.3265	chromosome:NC_014248.1/CP002059.1; plasmid pAzo01:NC_014249.1/CP002060.1; plasmid pAzo02:NC_014250.1/CP002061.1	-	3	5319	3669	6/14/10	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598476	GCA_000196515.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/515/GCA_000196515.1_ASM19651v1	20628610	708
Enterococcus mundtii QU 25	1300150	PRJDB868	192584	Terrabacteria group	Firmicutes	3.35106	38.3228	chromosome:NC_022878.1/AP013036.1; plasmid pQY003:NC_022881.1/AP013041.1; plasmid pQY024:NC_022884.1/AP013040.1; plasmid pQY039:NC_022880.1/AP013039.1; plasmid pQY082:NC_022883.1/AP013038.1; plasmid pQY182:NC_022879.1/AP013037.1	-	6	3229	2992	11/20/13	4/2/17	Complete Genome	"Genome Research Center, NODAI Research Institute, Tokyo University of Agriculture"	SAMD00061063	GCA_000504125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/125/GCA_000504125.1_ASM50412v1	24568933	QU25
Legionella pneumophila	446	PRJNA323476	323476	Proteobacteria	Gammaproteobacteria	3.40841	38.3168	chromosome:NZ_CP015947.1/CP015947.1; plasmid unnamed1:NZ_CP015948.1/CP015948.1	-	2	3114	3009	10/6/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05180034	GCA_001753265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/265/GCA_001753265.1_ASM175326v1	27684472	E2_N
Bifidobacterium longum AGR2137	1280702	PRJNA185722	185722	Terrabacteria group	Actinobacteria	2.27038	59.9	-	ATWX01	49	2040	1779	7/9/13	4/1/17	Contig	DOE Joint Genome Institute	SAMN02441228	GCA_000421385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/385/GCA_000421385.1_ASM42138v1	-	AGR2137
Fusobacterium nucleatum subsp. animalis F0419	999414	PRJNA64879	64879	Fusobacteria	Fusobacteriia	2.43805	27	-	AKCE01	5	2381	2256	6/15/12	3/30/17	Contig	Broad Institute	SAMN02596922	GCA_000273605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/605/GCA_000273605.1_PB_Fuso_nucl_ss_animalis_F0419_V1	22829535	F0419
Agrobacterium tumefaciens	358	PRJNA319063	319063	Proteobacteria	Alphaproteobacteria	5.44819	59.5	-	LXKX01	56	5264	5051	7/22/16	4/5/17	Scaffold	Oregon State University	SAMN04901304	GCA_001692405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/405/GCA_001692405.1_ASM169240v1	27547538	15-172
Shigella flexneri S5717	1212562	PRJNA171069	171069	Proteobacteria	Gammaproteobacteria	4.80523	50.7	-	AMJP01	222	5248	4362	1/6/15	8/4/17	Contig	Institute for Genome Sciences	SAMN03276476	GCA_000815485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/485/GCA_000815485.1_ASM81548v1	-	S5717
Legionella pneumophila	446	PRJNA323476	323476	Proteobacteria	Gammaproteobacteria	3.49339	38.3147	chromosome:NZ_CP015951.1/CP015951.1; plasmid unnamed1:NZ_CP015952.1/CP015952.1	-	2	3182	3079	10/6/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05180037	GCA_001753325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/325/GCA_001753325.1_ASM175332v1	27684472	E5_N
Pseudomonas putida CSV86	1005395	PRJNA65243	65243	Proteobacteria	Gammaproteobacteria	6.46978	63.1	-	AMWJ01	209	5846	5639	12/7/12	5/19/17	Contig	National Environmental Engineering Research Institute (NEERI)	SAMN02472262	GCA_000319305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/305/GCA_000319305.1_ASM31930v1	23469351	CSV86
Xylella fastidiosa	2371	PRJNA257008	257008	Proteobacteria	Gammaproteobacteria	2.74025	52.5118	plasmid pXF-BHR.CVC0251:NZ_CM003754.1/CM003754.1; plasmid pXF-P1.CVC0251:NZ_CM003755.1/CM003755.1; plasmid pXF-P4.CVC0251:NZ_CM003756.1/CM003756.1; plasmid pXF-PS.CVC0251:NZ_CM003757.1/CM003757.1	LRVE01	130	2715	2365	2/5/16	4/4/17	Contig	µFORGE	SAMN03862120	GCA_001549765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/765/GCA_001549765.1_XFAS001-SEQ-2-ASM-1	-	CVC0251
Leptospira interrogans serovar Muenchen str. Brem 129	1049923	PRJNA74063	74063	Spirochaetes	Spirochaetia	4.63098	35	-	AHMQ02	44	4148	3739	1/24/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436508	GCA_000243755.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/755/GCA_000243755.3_gls454053v2.0	-	Brem 129
Legionella pneumophila	446	PRJNA323476	323476	Proteobacteria	Gammaproteobacteria	3.41556	38.3014	chromosome:NZ_CP015956.1/CP015956.1; plasmid unnamed1:NZ_CP015957.1/CP015957.1	-	2	3104	3001	10/6/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05180041	GCA_001753405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/405/GCA_001753405.1_ASM175340v1	27684472	E9_O
Legionella pneumophila	446	PRJEB6403	251923	Proteobacteria	Gammaproteobacteria	3.42611	38.3	chromosome 1:NZ_LT906476.1/LT906476.1	-	1	3118	2971	8/15/17	8/28/17	Complete Genome	SC	SAMEA4040027	GCA_900186855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/855/GCA_900186855.1_48290_H02	-	NCTC11286
Legionella pneumophila	446	PRJNA314856	314856	Proteobacteria	Gammaproteobacteria	3.43944	38.3	chromosome:NZ_CP014759.1/CP014759.1	-	1	3133	2994	2/7/17	3/29/17	Complete Genome	Centers of Disease Control	SAMN04544730	GCA_001989475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/475/GCA_001989475.1_ASM198947v1	-	F4468
Jeotgalibaca sp. PTS2502	1903686	PRJNA362670	362670	Terrabacteria group	Firmicutes	2.30099	38.3	chromosome:NZ_CP019433.1/CP019433.1	-	1	2302	2137	1/30/17	4/17/17	Complete Genome	Kyung Hee University	SAMN06240847	GCA_001975685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/685/GCA_001975685.1_ASM197568v1	-	PTS2502
Legionella pneumophila	446	PRJNA314856	314856	Proteobacteria	Gammaproteobacteria	3.43944	38.3	chromosome:NZ_CP014760.1/CP014760.1	-	1	3133	2995	1/23/17	3/28/17	Complete Genome	Centers of Disease Control	SAMN04544525	GCA_001969405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/405/GCA_001969405.1_ASM196940v1	-	F4469
Legionella pneumophila	446	PRJNA292755	292755	Proteobacteria	Gammaproteobacteria	3.40914	38.3	chromosome:NZ_CP013742.1/CP013742.1	-	1	3100	3002	1/10/17	3/28/17	Complete Genome	Public Health Agency of Canada	SAMN03988484	GCA_001941585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/585/GCA_001941585.1_ASM194158v1	-	Philadelphia-1
Haemophilus influenzae	727	PRJNA272685	272685	Proteobacteria	Gammaproteobacteria	1.97946	37.8	-	JXMG01	109	2032	1793	2/9/15	3/25/17	Contig	Novartis Vaccines	SAMN03284980	GCA_000833745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/745/GCA_000833745.1_ASM83374v1	25814593	MiHi64
Prochlorococcus marinus str. SS51	167554	PRJNA246696	246696	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.74698	36.4	-	JNBD01	12	1927	1862	9/29/14	4/2/17	Contig	MIT	SAMN02769571	GCA_000760355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/355/GCA_000760355.1_ASM76035v1	25977791	SS51
Mycobacterium bovis	1765	PRJNA214551	214551	Terrabacteria group	Actinobacteria	4.32746	65.6	-	JPFP01	86	4270	4021	7/15/14	4/2/17	Contig	South American Mycobacterium bovis WGS	SAMN02899098	GCA_000729745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/745/GCA_000729745.1_ASM72974v1	-	09-1191
Mycobacterium avium subsp. paratuberculosis S397	1010838	PRJNA66075	66075	Terrabacteria group	Actinobacteria	4.81371	69.3	-	AFIF01	176	4627	4307	6/21/11	5/19/17	Contig	USDA-ARS-National Animal Disease Center	SAMN02470597	GCA_000219085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/085/GCA_000219085.2_ASM21908v2	22409516	S397
Clostridium perfringens	1502	PRJNA327406	327406	Terrabacteria group	Firmicutes	3.58061	28	-	MARK01	59	3286	3119	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323886	GCA_001949305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/305/GCA_001949305.1_ASM194930v1	28062388	JFP801
Xanthomonas campestris JX	1182783	PRJNA162587	162587	Proteobacteria	Gammaproteobacteria	5.023	65.1	-	AJVO01	155	4493	4160	5/22/12	6/15/17	Contig	Shanghai Jiao Tong University	SAMN02470938	GCA_000263835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/835/GCA_000263835.1_Xc1.0	22887662	JX
Legionella pneumophila subsp. fraseri	91892	PRJNA344070	344070	Proteobacteria	Gammaproteobacteria	3.50094	38.3	chromosome:NZ_CP017458.1/CP017458.1	-	1	3163	3004	11/28/16	3/28/17	Complete Genome	Centers of Disease Control	SAMN05818649	GCA_001886835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/835/GCA_001886835.1_ASM188683v1	-	Dallas 1E
Legionella pneumophila	446	PRJNA323476	323476	Proteobacteria	Gammaproteobacteria	3.41556	38.3	chromosome:NZ_CP015925.1/CP015925.1	-	1	3100	2995	10/6/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05180042	GCA_001752705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/705/GCA_001752705.1_ASM175270v1	27684472	E10_P
Staphylococcus epidermidis VCU118	904336	PRJNA53755	53755	Terrabacteria group	Firmicutes	2.55182	31.9	-	AHLB01	75	2541	2382	2/7/12	3/23/17	Contig	J. Craig Venter Institute	SAMN00116847	GCA_000247045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/045/GCA_000247045.2_ASM24704v2	-	VCU118
Legionella pneumophila	446	PRJNA323476	323476	Proteobacteria	Gammaproteobacteria	3.40205	38.3	chromosome:NZ_CP015926.1/CP015926.1	-	1	3110	3007	10/6/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05180043	GCA_001752725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/725/GCA_001752725.1_ASM175272v1	27684472	E11_U
Legionella pneumophila	446	PRJNA323476	323476	Proteobacteria	Gammaproteobacteria	3.44708	38.3	chromosome:NZ_CP015927.1/CP015927.1	-	1	3139	3042	10/6/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05180048	GCA_001752745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/745/GCA_001752745.1_ASM175274v1	27684472	Philadelphia_1_ATCC
Pseudomonas fluorescens PA4C2	1403315	PRJNA219733	219733	Proteobacteria	Gammaproteobacteria	6.21086	60.1	-	AXDA01	5	5727	5464	11/18/14	4/2/17	Scaffold	CNRS - UPR2355	SAMN03198227	GCA_000785395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/395/GCA_000785395.1_PseuFluoPA4C2_1.0	25635023	PA4C2
Legionella pneumophila	446	PRJNA323476	323476	Proteobacteria	Gammaproteobacteria	3.40856	38.3	chromosome:NZ_CP015928.1/CP015928.1	-	1	3100	2999	10/6/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05180044	GCA_001752765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/765/GCA_001752765.1_ASM175276v1	27684472	Philadelphia_1_CDC
Legionella pneumophila	446	PRJNA323476	323476	Proteobacteria	Gammaproteobacteria	3.44708	38.3	chromosome:NZ_CP015929.1/CP015929.1	-	1	3139	3040	10/6/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05180045	GCA_001752785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/785/GCA_001752785.1_ASM175278v1	27684472	Philadelphia_2
Legionella pneumophila	446	PRJNA323476	323476	Proteobacteria	Gammaproteobacteria	3.40901	38.3	chromosome:NZ_CP015930.1/CP015930.1	-	1	3100	2996	10/6/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05180046	GCA_001752805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/805/GCA_001752805.1_ASM175280v1	27684472	Philadelphia_3
Legionella pneumophila	446	PRJNA323476	323476	Proteobacteria	Gammaproteobacteria	3.44709	38.3	chromosome:NZ_CP015931.1/CP015931.1	-	1	3138	3039	10/6/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05180047	GCA_001752825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/825/GCA_001752825.1_ASM175282v1	27684472	Philadelphia_4
Legionella pneumophila	446	PRJNA323476	323476	Proteobacteria	Gammaproteobacteria	3.40416	38.3	chromosome:NZ_CP015933.1/CP015933.1	-	1	3085	2984	10/6/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05179997	GCA_001752865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/865/GCA_001752865.1_ASM175286v1	27684472	C2_S
Legionella pneumophila	446	PRJNA323476	323476	Proteobacteria	Gammaproteobacteria	3.45341	38.3	chromosome:NZ_CP015934.1/CP015934.1	-	1	3140	3036	10/6/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05180024	GCA_001752885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/885/GCA_001752885.1_ASM175288v1	27684472	C3_O
Pseudomonas fluorescens	294	PRJNA236579	236579	Proteobacteria	Gammaproteobacteria	6.3916	58.8	-	JBOO01	9	5809	5616	12/10/14	4/3/17	Scaffold	CNRS - UPR2355	SAMN03198228	GCA_000800625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/625/GCA_000800625.1_PseuPA3G8	25635023	PA3G8
Legionella pneumophila	446	PRJNA323476	323476	Proteobacteria	Gammaproteobacteria	3.40936	38.3	chromosome:NZ_CP015935.1/CP015935.1	-	1	3101	3001	10/6/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05180025	GCA_001752905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/905/GCA_001752905.1_ASM175290v1	27684472	C4_S
Legionella pneumophila	446	PRJNA323476	323476	Proteobacteria	Gammaproteobacteria	3.41972	38.3	chromosome:NZ_CP015936.1/CP015936.1	-	1	3103	3001	10/6/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05180026	GCA_001752925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/925/GCA_001752925.1_ASM175292v1	27684472	C5_P
Staphylococcus epidermidis VCU120	904337	PRJNA53757	53757	Terrabacteria group	Firmicutes	2.55316	31.8	-	AHLC01	61	2555	2409	2/7/12	3/23/17	Contig	J. Craig Venter Institute	SAMN00117466	GCA_000247065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/065/GCA_000247065.2_ASM24706v2	-	VCU120
Legionella pneumophila	446	PRJNA323476	323476	Proteobacteria	Gammaproteobacteria	3.4042	38.3	chromosome:NZ_CP015937.1/CP015937.1	-	1	3086	2986	10/6/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05180027	GCA_001752945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/945/GCA_001752945.1_ASM175294v1	27684472	C6_S
Legionella pneumophila	446	PRJNA323476	323476	Proteobacteria	Gammaproteobacteria	3.35944	38.3	chromosome:NZ_CP015938.1/CP015938.1	-	1	3047	2944	10/6/16	4/10/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05180028	GCA_001752965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/965/GCA_001752965.1_ASM175296v1	27684472	C7_O
Xanthomonas campestris pv. viticola	487899	PRJEB5493	251628	Proteobacteria	Gammaproteobacteria	5.10504	64.5	-	CBZT01	50	4578	4222	6/2/14	4/2/17	Contig	IMTECH (CSIR) Chandigarh	SAMEA3139044	GCA_000723725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/725/GCA_000723725.1_XVIT	25085494	LMG 965
Clostridium perfringens	1502	PRJNA327409	327409	Terrabacteria group	Firmicutes	3.62597	28	-	MARL01	117	3342	3124	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323887	GCA_001949315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/315/GCA_001949315.1_ASM194931v1	28062388	JFP804
Mycobacterium avium subsp. paratuberculosis JQ5	1051629	PRJNA68575	68575	Terrabacteria group	Actinobacteria	4.73547	69.1	-	AHAZ01	176	4627	3565	12/29/11	5/19/17	Contig	UW-Madison	SAMN02472065	GCA_000240345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/345/GCA_000240345.2_ASM24034v2	22393374	JQ5
Mycobacterium bovis	1765	PRJNA214551	214551	Terrabacteria group	Actinobacteria	4.32889	65.6	-	JPFQ01	69	4273	4036	7/15/14	4/2/17	Contig	South American Mycobacterium bovis WGS	SAMN02899231	GCA_000729755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/755/GCA_000729755.1_ASM72975v1	-	05-567
Prochlorococcus marinus	1219	PRJEB9287	287342	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.41837	31.4	-	CVSV01	136	1564	1493	6/17/15	4/11/17	Contig	UNIVERSITY OF CALIFORNIA - SAN DIEGO	SAMEA3368573	GCA_001180245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/245/GCA_001180245.1_CLC_assembled_contigs	-	SCGC AAA795-F05
Haemophilus influenzae	727	PRJNA272685	272685	Proteobacteria	Gammaproteobacteria	1.8356	38	-	JXMF01	26	1855	1701	2/9/15	3/25/17	Contig	Novartis Vaccines	SAMN03284979	GCA_000833755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/755/GCA_000833755.1_ASM83375v1	25814593	MiHi270
Legionella pneumophila	446	PRJNA323476	323476	Proteobacteria	Gammaproteobacteria	3.36832	38.3	chromosome:NZ_CP015944.1/CP015944.1	-	1	3051	2947	10/6/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05180031	GCA_001753105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/105/GCA_001753105.1_ASM175310v1	27684472	C10_S
Legionella pneumophila	446	PRJNA323476	323476	Proteobacteria	Gammaproteobacteria	3.41688	38.3	chromosome:NZ_CP015945.1/CP015945.1	-	1	3102	2998	10/6/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05180032	GCA_001753125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/125/GCA_001753125.1_ASM175312v1	27684472	C11_O
Legionella pneumophila	446	PRJNA323476	323476	Proteobacteria	Gammaproteobacteria	3.41134	38.3	chromosome:NZ_CP015946.1/CP015946.1	-	1	3101	3002	10/6/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05180033	GCA_001753145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/145/GCA_001753145.1_ASM175314v1	27684472	E1_P
Legionella pneumophila	446	PRJNA323476	323476	Proteobacteria	Gammaproteobacteria	3.46535	38.3	chromosome:NZ_CP015949.1/CP015949.1	-	1	3154	3052	10/6/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05180035	GCA_001753285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/285/GCA_001753285.1_ASM175328v1	27684472	E3_N
Legionella pneumophila	446	PRJNA323476	323476	Proteobacteria	Gammaproteobacteria	3.41676	38.3	chromosome:NZ_CP015950.1/CP015950.1	-	1	3098	2996	10/6/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05180036	GCA_001753305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/305/GCA_001753305.1_ASM175330v1	27684472	E4_N
Legionella pneumophila	446	PRJNA323476	323476	Proteobacteria	Gammaproteobacteria	3.40517	38.3	chromosome:NZ_CP015953.1/CP015953.1	-	1	3084	2981	10/6/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05180038	GCA_001753345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/345/GCA_001753345.1_ASM175334v1	27684472	E6_N
Leptospira interrogans str. FPW2026	1049931	PRJNA74077	74077	Spirochaetes	Spirochaetia	4.88027	35.1	-	AHMX02	93	4459	4021	1/24/12	5/18/17	Contig	J. Craig Venter Institute	SAMN02436424	GCA_000243895.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/895/GCA_000243895.3_LintFPW2026v1.0	-	FPW2026
Xylella fastidiosa	2371	PRJNA257008	257008	Proteobacteria	Gammaproteobacteria	2.77256	52.432	plasmid pXF-BHR-COF0324:NZ_CM003758.1/CM003758.1; plasmid pXF-P1.COF0324:NZ_CM003759.1/CM003759.1; plasmid pXF-PC_CFO0324:NZ_CM003760.1/CM003760.1; plasmid pXF-RC.COF0324:NZ_CM003761.1/CM003761.1	LRVG01	143	2765	2416	2/5/16	4/4/17	Contig	µFORGE	SAMN03862122	GCA_001549815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/815/GCA_001549815.1_XFAS003-SEQ-2-ASM-1	-	COF0324
Pseudomonas putida TRO1	1227924	PRJNA174070	174070	Proteobacteria	Gammaproteobacteria	6.31521	61.4	-	APBQ01	222	5939	5693	4/19/13	5/19/17	Contig	Aalborg University	SAMN02391501	GCA_000367825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/825/GCA_000367825.1_Pseudomonas_putida_TRO1	-	TRO1
Legionella pneumophila	446	PRJNA323476	323476	Proteobacteria	Gammaproteobacteria	3.426	38.3	chromosome:NZ_CP015954.1/CP015954.1	-	1	3105	2999	10/6/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05180039	GCA_001753365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/365/GCA_001753365.1_ASM175336v1	27684472	E7_O
Shigella flexneri S6585	1212566	PRJNA171073	171073	Proteobacteria	Gammaproteobacteria	4.81537	50.7	-	AMJT01	274	5295	4349	1/6/15	8/4/17	Contig	Institute for Genome Sciences	SAMN03276487	GCA_000815565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/565/GCA_000815565.1_ASM81556v1	-	S6585
Agrobacterium tumefaciens	358	PRJNA319063	319063	Proteobacteria	Alphaproteobacteria	6.05497	58.3	-	LXKY01	42	5747	5547	7/22/16	4/5/17	Scaffold	Oregon State University	SAMN04901305	GCA_001692425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/425/GCA_001692425.1_ASM169242v1	27547538	15-174
Fusobacterium nucleatum subsp. animalis 7_1	457405	PRJNA32483	32483	Fusobacteria	Fusobacteriia	2.51549	27	-	AKBT01	4	2502	2349	6/15/12	3/30/17	Contig	Broad Institute	SAMN02463711	GCA_000273625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/625/GCA_000273625.1_PB_Fuso_sp_7_1_V1	22829535	7_1
Bifidobacterium longum D2957	1298922	PRJNA191039	191039	Terrabacteria group	Actinobacteria	2.33023	60.4	-	AQGL01	13	2046	1830	6/17/13	4/2/17	Contig	Utah State University	SAMN02472064	GCA_000478525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/525/GCA_000478525.1_blongD2957	-	D2957
Legionella pneumophila	446	PRJNA323476	323476	Proteobacteria	Gammaproteobacteria	3.45556	38.3	chromosome:NZ_CP015955.1/CP015955.1	-	1	3140	3037	10/6/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05180040	GCA_001753385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/385/GCA_001753385.1_ASM175338v1	27684472	E8_O
Legionella pneumophila	446	PRJNA318217	318217	Proteobacteria	Gammaproteobacteria	3.43565	38.3	chromosome:NZ_CP015342.1/CP015342.1	-	1	3128	2992	5/26/16	3/28/17	Complete Genome	Pneumonia Response and Surveillance Laboratory (CDC)	SAMN04633978	GCA_001652645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/645/GCA_001652645.1_ASM165264v1	-	D-7632
Legionella pneumophila	446	PRJNA318217	318217	Proteobacteria	Gammaproteobacteria	3.43618	38.3	chromosome:NZ_CP015343.1/CP015343.1	-	1	3127	2987	5/26/16	3/28/17	Complete Genome	Pneumonia Response and Surveillance Laboratory (CDC)	SAMN04634091	GCA_001652665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/665/GCA_001652665.1_ASM165266v1	-	D-7631
Streptococcus suis YS54	1214208	PRJNA171471	171471	Terrabacteria group	Firmicutes	2.31479	41.2	-	ALMX01	124	2275	2114	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469559	GCA_000440095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/095/GCA_000440095.1_version1	-	YS54
Pseudomonas syringae pv. syringae	321	PRJNA253460	253460	Proteobacteria	Gammaproteobacteria	5.81226	59.2	-	JPNN01	29	5192	4903	8/7/14	3/24/17	Scaffold	University of Exeter	SAMN02870642	GCA_000738515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/515/GCA_000738515.1_Alf3_v1	26868403	Alf3
Vibrio vulnificus	672	PRJNA276162	276162	Proteobacteria	Gammaproteobacteria	4.88452	46.8	-	JZET01	110	4556	4373	3/23/15	4/3/17	Contig	Hankuk University of Foreign Studies	SAMN03371453	GCA_000959755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/755/GCA_000959755.1_ASM95975v1	-	NV1
Bacillus licheniformis	1402	PRJNA316783	316783	Terrabacteria group	Firmicutes	4.43272	45.6	-	LWKE01	279	4715	4417	11/10/16	4/5/17	Contig	CSIR-Institute of Microbial Technology	SAMN04590052	GCA_001876575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/575/GCA_001876575.1_ASM187657v1	-	RE1.60
Bacillus sp. IHB B 7164	1827146	PRJNA313491	313491	Terrabacteria group	Firmicutes	5.03663	38.3	chromosome:NZ_CP015226.1/CP015226.1	-	1	5196	4920	5/19/16	4/12/17	Complete Genome	CSIR-Institute of Himalayan Bioresource Technology	SAMN04524004	GCA_001648135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/135/GCA_001648135.1_ASM164813v1	-	IHB B 7164
Shigella sonnei	624	PRJEB2075	203826	Proteobacteria	Gammaproteobacteria	4.91676	50.4	-	CXMK01	462	5599	4744	7/16/15	2/24/17	Contig	SC	SAMEA1560460	GCA_001250895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/895/GCA_001250895.1_8489_2_93	-	92497962
Bacteroides fragilis str. 3783N2-1	1339312	PRJNA206155	206155	FCB group	Bacteroidetes/Chlorobi group	5.18588	43.6	-	JGCT01	436	4652	4304	3/20/14	4/18/17	Contig	IGS	SAMN02314533	GCA_000598345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/345/GCA_000598345.1_ASM59834v1	-	3783N2-1
Streptococcus thermophilus	1308	PRJNA288538	288538	Terrabacteria group	Firmicutes	1.76901	38.9	-	LGRS01	85	1874	1637	9/30/15	4/4/17	Contig	CSK Food Enrichment	SAMN03801559	GCA_001306395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/395/GCA_001306395.1_ASM130639v1	26607891	C106
Lactobacillus reuteri	1598	PRJNA342243	342243	Terrabacteria group	Firmicutes	1.97682	38.7	-	MIMO01	136	1963	1803	5/11/17	5/22/17	Contig	Seoul National University	SAMN05751489	GCA_002128605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/605/GCA_002128605.1_ASM212860v1	-	KLR2007
Burkholderia cenocepacia	95486	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.69583	67.3	-	LPJQ01	82	7187	6925	1/22/16	3/27/17	Contig	Northern Arizona University	SAMN03449595	GCA_001531965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/965/GCA_001531965.1_ASM153196v1	-	MSMB364WGS
Streptococcus pyogenes	1314	PRJNA308987	308987	Terrabacteria group	Firmicutes	1.8787	38.3	chromosome:NZ_CP014139.1/CP014139.1	-	1	1885	1687	1/25/16	3/27/17	Complete Genome	University of Michigan	SAMN04419117	GCA_001535565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/565/GCA_001535565.1_ASM153556v1	26988051	MEW123
Caldimicrobium thiodismutans	1653476	PRJDB4154	308191	Thermodesulfobacteria	Thermodesulfobacteria	1.81495	38.3	chromosome Unknown:NZ_AP014945.1/AP014945.1	-	1	1831	1765	1/6/16	4/11/17	Complete Genome	"Microbial Ecology Group, Institution of Low Temperature Science, Hokkaido University"	SAMD00039083	GCA_001548275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/275/GCA_001548275.1_ASM154827v1	26842785	TF1
Bacillus pumilus	1408	PRJEB9876	290051	Terrabacteria group	Firmicutes	3.7589	41.2	-	CYHK01	108	3860	3739	8/27/15	4/10/17	Contig	University of Liverpool	SAMEA3484402	GCA_001286985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/985/GCA_001286985.1_Bacillus_JRS3	-	-
Corynebacterium glutamicum	1718	PRJNA305668	305668	Terrabacteria group	Actinobacteria	3.35832	54	-	LOQV01	36	3175	3029	12/21/16	9/23/17	Contig	Shanghai Institutes for Biological Sciences (SIBS) of Chinese Academy of Sciences (CAS)	SAMN04331501	GCA_001912755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/755/GCA_001912755.2_ASM191275v2	28198668	ATCC 13870
Burkholderia mallei FMH	334802	PRJNA13987	13987	Proteobacteria	Betaproteobacteria	5.89935	68.2	-	AAIQ02	12	6221	5691	7/5/05	5/18/17	Scaffold	TIGR	SAMN02435848	GCA_000152385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/385/GCA_000152385.1_ASM15238v1	-	FMH
Listeria monocytogenes	1639	PRJNA302838	302838	Terrabacteria group	Firmicutes	2.84204	38.3	chromosome:NZ_CP013287.1/CP013287.1	-	1	2865	2743	12/1/15	3/1/17	Complete Genome	ETH Zurich	SAMN04286630	GCA_001454885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/885/GCA_001454885.1_ASM145488v1	27034489	WSLC 1020
Ralstonia solanacearum	305	PRJEB8309	279369	Proteobacteria	Betaproteobacteria	5.62106	66.4	-	CDRJ01	1	5217	4585	3/24/15	4/4/17	Scaffold	CIRAD	SAMEA3218683	GCA_001373255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/255/GCA_001373255.1_CFBP7014	-	CFBP7014
Candidatus Pelagibacter ubique	198252	PRJEB9287	287342	Proteobacteria	Alphaproteobacteria	0.477445	29.3	-	CVSE01	55	-	-	6/17/15	6/17/15	Contig	UNIVERSITY OF CALIFORNIA - SAN DIEGO	SAMEA3368556	GCA_001179905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/905/GCA_001179905.1_CLC_assembled_contigs	-	SCGC AAA795-C10
Vibrio cholerae O1 str. Inaba G4222	1224154	PRJNA172960	172960	Proteobacteria	Gammaproteobacteria	4.20281	47.4989	chromosome I:NZ_CM001785.1/CM001785.1; chromosome II:NZ_CM001786.1/CM001786.1	ANNB01	2	7892	7662	2/6/13	5/19/17	Chromosome	CSIR	SAMN02469666	GCA_000338075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/338/075/GCA_000338075.1_G4222_chroI_and_II	23516184	Inaba G4222
Clostridioides difficile E14	1215075	PRJEB205	222726	Terrabacteria group	Firmicutes	4.13127	28.3	-	CAMS01	319	3869	3723	10/14/13	3/15/17	Scaffold	LPBA	SAMEA3138886	GCA_000530475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/475/GCA_000530475.1_E14	24482682	E14
Shigella boydii	621	PRJNA288464	288464	Proteobacteria	Gammaproteobacteria	4.23564	51	-	LPTJ01	688	4788	3979	12/15/16	2/26/17	Contig	"University of Maryland, School of Medicine"	SAMN04001697	GCA_001906195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/195/GCA_001906195.1_ASM190619v1	-	602144
Streptococcus salivarius	1304	PRJNA320256	320256	Terrabacteria group	Firmicutes	2.36929	39.3	-	LXIK01	224	2274	2065	12/16/16	4/6/17	Contig	State University of Campinas	SAMN04933505	GCA_001907045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/045/GCA_001907045.1_ASM190704v1	-	39-07 S15
Streptococcus pyogenes	1314	PRJNA243328	243328	Terrabacteria group	Firmicutes	1.95047	38.3	chromosome:NZ_CP010449.1/CP010449.1	-	1	1987	1843	8/17/15	3/26/17	Complete Genome	Public Health Ontario	SAMN03274509	GCA_001267805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/805/GCA_001267805.1_ASM126780v1	-	NGAS322
Brucella abortus	235	PRJNA400357	400357	Proteobacteria	Alphaproteobacteria	3.33633	56.9279	chromosome 1:NZ_CP023237.1/CP023237.1; chromosome 2:NZ_CP023238.1/CP023238.1	-	2	3298	2892	9/12/17	9/14/17	Chromosome	IZSM-Portici	SAMN07572694	GCA_002291325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/325/GCA_002291325.1_ASM229132v1	-	38127
Yersinia pseudotuberculosis	633	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.7436	47.3	-	CQBJ01	85	4401	4129	3/22/15	4/3/17	Scaffold	SC	SAMEA859924	GCA_001108005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/005/GCA_001108005.1_5139_2_2	-	1231
Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4	784613	PRJNA49619	49619	Terrabacteria group	Firmicutes	1.97734	50	-	AEAT01	140	1952	1773	7/13/10	3/30/17	Contig	J. Craig Venter Institute	SAMN00017036	GCA_000179375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/375/GCA_000179375.1_ASM17937v1	-	PB2003/044-T3-4
Leptospira borgpetersenii	174	PRJNA257146	257146	Spirochaetes	Spirochaetia	3.86194	40.1	-	JQRX01	179	3701	3403	2/24/16	4/5/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947775	GCA_001569455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/455/GCA_001569455.1_ASM156945v1	26833181	56602
Cyclobacterium amurskyense	320787	PRJNA289169	289169	FCB group	Bacteroidetes/Chlorobi group	6.15883	38.3	chromosome:NZ_CP012040.1/CP012040.1	-	1	4906	4798	7/8/15	4/17/17	Complete Genome	Korea Research Institute of Bioscience and Biotechnology	SAMN03846661	GCA_001050135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/135/GCA_001050135.1_ASM105013v1	-	KCTC 12363
Campylobacter fetus subsp. testudinum	1507806	PRJNA286186	286186	Proteobacteria	delta/epsilon subdivisions	1.77085	33	-	LFXE01	53	1759	1699	8/5/16	4/5/17	Contig	Utrecht University	SAMN03741943	GCA_001699385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/385/GCA_001699385.1_ASM169938v1	27333878	D4335
Xanthomonas oryzae	347	PRJNA257008	257008	Proteobacteria	Gammaproteobacteria	4.87148	64	-	LHUJ01	391	4583	3665	8/31/15	4/11/17	Contig	µFORGE	SAMN03862117	GCA_001277045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/045/GCA_001277045.1_XANT002-SEQ-2-ASM-1	-	X11-5A
Oenococcus oeni IOEB_S277	1428431	PRJNA229565	229565	Terrabacteria group	Firmicutes	1.7414	37.8	-	AZKD01	69	1779	1567	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02902407	GCA_000761745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/745/GCA_000761745.1_Oeoe_IOEB_S277_1.0	24901216	IOEB_S277
Streptococcus mitis	28037	PRJNA274768	274768	Terrabacteria group	Firmicutes	1.9152	40.1	-	JYGP01	3	1976	1826	3/23/15	4/3/17	Contig	University at Buffalo	SAMN03334899	GCA_000960005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/005/GCA_000960005.1_ASM96000v1	25999552	OT25
Aeromonas salmonicida subsp. salmonicida	29491	PRJNA264317	264317	Proteobacteria	Gammaproteobacteria	4.89563	58.4	-	MIIR01	116	4741	4246	12/13/16	4/6/17	Contig	Universite Laval	SAMN05728468	GCA_001902055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/055/GCA_001902055.1_ASM190205v1	-	2010-47 K18
Vibrio parahaemolyticus SBR10290	1238194	PRJNA176628	176628	Proteobacteria	Gammaproteobacteria	5.13674	45.3	-	JAIJ01	67	4979	4689	1/23/14	3/18/17	Scaffold	IGS	SAMN01923807	GCA_000522045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/045/GCA_000522045.2_vpSBR10290	-	SBR10290
Haemophilus influenzae 2019	1232659	PRJNA175345	175345	Proteobacteria	Gammaproteobacteria	1.96966	38.3	chromosome:NZ_CP008740.1/CP008740.1	-	1	2017	1863	4/2/15	3/26/17	Complete Genome	"The Research Institute at Nationwide Children's Hospital and The Ohio State University, Department of Microbiology and DNA Facility, The University of Iowa, Carver College of Medicine and State"	SAMN03450976	GCA_000968335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/335/GCA_000968335.1_ASM96833v1	-	2019
Coxiella burnetii	777	PRJNA257771	257771	Proteobacteria	Gammaproteobacteria	2.0709	42.545	plasmid QpRS:NZ_JPVV01000067.1/JPVV01000067.1	JPVV01	67	2272	1991	8/26/14	4/2/17	Contig	Bundeswehr	SAMN02978824	GCA_000756325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/325/GCA_000756325.1_CoxAra	25278528	AuQ01
Lactobacillus casei	1582	PRJNA284431	284431	Terrabacteria group	Firmicutes	2.92405	46.5	-	LDEJ01	86	3020	2807	1/25/16	4/4/17	Contig	Geneva University Hospitals	SAMN03702539	GCA_001540885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/885/GCA_001540885.1_ASM154088v1	26713450	Lc1542
Salinispora arenicola CNT850	1136428	PRJNA169834	169834	Terrabacteria group	Actinobacteria	5.62192	69.6	-	AZWG01	67	5094	4799	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597237	GCA_000514615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/615/GCA_000514615.1_ASM51461v1	-	CNT850
Vibrio harveyi	669	PRJNA324107	324107	Proteobacteria	Gammaproteobacteria	5.91709	44.8	-	MBTP01	66	5588	5362	9/1/16	4/5/17	Contig	Texas A&M University - Corpus Christi	SAMN05195136	GCA_001718025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/025/GCA_001718025.1_ASM171802v1	-	Hep-2a-10
Streptococcus anginosus subsp. whileyi MAS624	1353243	PRJDB81	219073	Terrabacteria group	Firmicutes	2.12228	38.3	chromosome:NZ_AP013072.1/AP013072.1	-	1	2153	1938	7/4/13	4/2/17	Complete Genome	"Pediatric Dentistry, Tokyo Dental College"	SAMD00061060	GCA_000478925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/925/GCA_000478925.1_ASM47892v1	-	MAS624
Porphyromonas gingivalis	837	PRJEB10280	362716	FCB group	Bacteroidetes/Chlorobi group	2.34111	48.3	-	FUGG01	68	2084	1898	2/8/17	4/6/17	Scaffold	"Melbourne Dental School, University of Melbourne"	SAMEA3505345	GCA_900157285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/285/GCA_900157285.1_13-1	-	13_1
Vibrio fischeri SA1G	1367489	PRJNA212810	212810	Proteobacteria	Gammaproteobacteria	3.74652	39.1	-	AUUY01	3710	-	-	6/8/17	6/8/17	Contig	New Mexico State University	SAMN06226648	GCA_002179665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/665/GCA_002179665.1_ASM217966v1	-	SA1G
Clostridium botulinum B2 450	1379739	PRJNA213608	213608	Terrabacteria group	Firmicutes	4.32067	27.8	-	JXSU01	10	4149	3953	2/17/15	3/25/17	Scaffold	Army Medical and Veterinary Research Center	SAMN02854325	GCA_000876495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/495/GCA_000876495.1_ASM87649v1	25838491	B2 450
Burkholderia multivorans	87883	PRJEB12787	382512	Proteobacteria	Betaproteobacteria	6.55955	67.2	-	FKJV01	4	6191	5891	4/11/17	7/9/17	Contig	LM-UGent	SAMEA3876908	GCA_900079455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/455/GCA_900079455.1_ASM90007945v1	-	-
Borrelia burgdorferi IPT132	1408880	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.1945	28.3	-	AYCD01	263	1240	696	12/3/13	4/2/17	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378847	GCA_000502135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/135/GCA_000502135.1_BorBurgIPT132	-	IPT132
Treponema pallidum subsp. pallidum	161	PRJNA322283	322283	Spirochaetes	Spirochaetia	1.13918	52.8	chromosome:NZ_CP016056.1/CP016056.1	-	1	1065	891	8/25/16	4/5/17	Chromosome	"National Institute of Health, Portugal"	SAMN05150594	GCA_001713075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/075/GCA_001713075.1_ASM171307v1	-	PT_SIF1140
Rhizobium leguminosarum bv. viciae WSM1481	935554	PRJNA84327	84327	Proteobacteria	Alphaproteobacteria	7.55558	61	-	AQUM01	6	7452	7114	4/19/13	5/19/17	Contig	JGI	SAMN02261314	GCA_000372305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/305/GCA_000372305.1_ASM37230v1	-	WSM1481
Clavibacter michiganensis subsp. michiganensis	33013	PRJNA331199	331199	Terrabacteria group	Actinobacteria	3.35292	72.7	-	MDHH01	10	4112	4051	5/19/17	5/19/17	Contig	University of California	SAMN05439588	GCA_002151045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/045/GCA_002151045.1_ASM215104v1	-	CASJ007
Brucella suis F8/06-3	1169243	PRJNA173498	173498	Proteobacteria	Alphaproteobacteria	3.33516	57.2	-	AQLH01	3	3399	3160	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN00839695	GCA_000371305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/305/GCA_000371305.1_Bruc_suis_F8_06-3_V1	-	F8/06-3
Enterococcus faecalis TX2137	749491	PRJNA47129	47129	Terrabacteria group	Firmicutes	2.96688	37.2	-	AEBQ01	106	3011	2872	8/26/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189128	GCA_000147595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/595/GCA_000147595.1_ASM14759v1	-	TX2137
Borrelia garinii IPT133	1408853	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.12704	27.8	-	AYBC01	416	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378820	GCA_000501215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/215/GCA_000501215.1_BorGarIPT133	-	IPT133
Streptococcus mutans TCI-173	1074140	PRJNA72029	72029	Terrabacteria group	Firmicutes	1.87268	36.8	-	AGLB01	112	1879	1786	10/6/11	3/22/17	Contig	JCVI	SAMN02436513	GCA_000229205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/205/GCA_000229205.2_SMUT5-NEX_9-173	-	TCI-173
Neisseria gonorrhoeae	485	PRJNA400360	400360	Proteobacteria	Betaproteobacteria	2.23597	52.4	-	NTCS01	181	2745	2229	9/11/17	9/11/17	Scaffold	State Research Center of Dermatovenereology and Cosmetology (CNIKVI)	SAMN07566721	GCA_002289135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/135/GCA_002289135.1_ASM228913v1	-	41/15/003
Enterococcus faecium	1352	PRJNA292806	292806	Terrabacteria group	Firmicutes	3.20345	37.7022	chromosome:NZ_CP012471.1/CP012471.1; plasmid ISMMS_VRE10_p1:NZ_CP012472.1/CP012472.1; plasmid ISMMS_VRE10_p2:NZ_CP012473.1/CP012473.1; plasmid ISMMS_VRE10_p3:NZ_CP012474.1/CP012474.1	-	4	3329	3066	9/7/16	4/17/17	Chromosome	Mount Sinai School of Medicine	SAMN03988629	GCA_001721105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/105/GCA_001721105.1_ASM172110v1	28301471	ISMMS_VRE_10
Chlamydia psittaci C19/98	1112250	PRJNA77073	77073	PVC group	Chlamydiae	1.18939	39.1	-	ATLD01	9	1065	1002	6/25/13	4/1/17	Scaffold	University of Maryland School of Medicine	SAMN00860249	GCA_000415805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/805/GCA_000415805.1_ASM41580v1	-	C19/98
Bifidobacterium animalis subsp. lactis ATCC 27536	1365953	PRJNA215969	215969	Terrabacteria group	Actinobacteria	1.91245	60.5	-	AWFL01	18	1636	1569	8/11/15	4/3/17	Scaffold	"Food Science and Technology Institute, Morinaga Milk Industry Co., Ltd"	SAMN03978807	GCA_001263975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/975/GCA_001263975.1_ASM126397v1	26236711	ATCC 27536
Bacillus amyloliquefaciens HB-26	1366051	PRJNA212551	212551	Terrabacteria group	Firmicutes	3.98936	46.4	-	AUWK01	39	3940	3769	11/17/14	4/2/17	Contig	Hubei Academy of Agricultural Sciences	SAMN03196740	GCA_000784675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/675/GCA_000784675.1_A3_1	25197462	HB-26
Stenotrophomonas maltophilia	40324	PRJNA266048	266048	Proteobacteria	Gammaproteobacteria	4.68825	65.5	-	JSXG01	231	4104	3999	12/1/14	8/17/15	Contig	Shandong Academy of Sciences	SAMN03161950	GCA_000788095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/095/GCA_000788095.1_ASM78809v1	25700397	B418
Bifidobacterium bifidum	1681	PRJNA272371	272371	Terrabacteria group	Actinobacteria	2.10522	62.9	-	LSUL01	44	1783	1663	2/29/16	2/29/16	Contig	National University of Singapore	SAMN04497897	GCA_001576865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/865/GCA_001576865.1_ASM157686v1	-	-
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.13128	41.2	-	CVXW01	75	2063	1887	6/23/15	3/26/17	Contig	SC	SAMEA1032771	GCA_001175365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/365/GCA_001175365.1_6817_2_87	-	EQUI0040
[Haemophilus] parasuis	738	PRJNA301181	301181	Proteobacteria	Gammaproteobacteria	2.19819	39.9	-	MNAV01	140	2141	1936	1/6/17	4/6/17	Scaffold	Chinese Academy of Agricultural Sciences	SAMN04230857	GCA_001938295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/295/GCA_001938295.1_ASM193829v1	-	16
Pasteurella multocida subsp. multocida str. PMTB	1220026	PRJNA172191	172191	Proteobacteria	Gammaproteobacteria	2.20342	40.4	-	AWTD01	8	2096	1996	9/19/13	4/2/17	Contig	Institute of Bioscience	SAMN02469964	GCA_000469095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/095/GCA_000469095.1_ASM46909v1	24136854	PMTB
Lactobacillus rhamnosus PEL6	1457396	PRJNA237054	237054	Terrabacteria group	Firmicutes	2.87687	46.7	-	JDFR01	67	2954	2772	6/26/14	4/2/17	Contig	Helsinki University	SAMN02602921	GCA_000712515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/515/GCA_000712515.1_PEL6	25032833	PEL6
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31113	57.2358	chromosome 1:NZ_CP018484.1/CP018484.1; chromosome 2:NZ_CP018485.1/CP018485.1	-	2	3374	3150	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932957	GCA_002191275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/275/GCA_002191275.1_ASM219127v1	28388689	BwIM_IRN_28
Listeria monocytogenes SLCC2376	882097	PRJEA51863	51863	Terrabacteria group	Firmicutes	2.84018	38.3	chromosome:NC_018590.1/FR733651.1	-	1	2864	2741	9/10/12	2/26/17	Complete Genome	ERA-NET / Spatelis	SAMEA2272177	GCA_000307065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/065/GCA_000307065.1_ASM30706v1	23339658	SLCC2376
Bordetella bronchiseptica MBORD782	1331234	PRJNA202146	202146	Proteobacteria	Betaproteobacteria	5.13444	68.3	-	JGXT01	90	4899	4749	5/12/14	4/2/17	Contig	JCVI	SAMN02231429	GCA_000689915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/915/GCA_000689915.1_gbb38v01	25908122	MBORD782
Sinorhizobium meliloti CCNWSX0020	1107881	PRJNA75085	75085	Proteobacteria	Alphaproteobacteria	7.00159	62	-	AGVV01	233	7073	6389	12/7/11	5/19/17	Contig	Northwest A&F University	SAMN02470710	GCA_000236945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/945/GCA_000236945.2_ASM23694v2	22328762	CCNWSX0020
Corynebacterium diphtheriae	1717	PRJNA342909	342909	Terrabacteria group	Actinobacteria	2.49573	53.6	-	MJAR01	115	2429	2131	9/22/16	4/21/17	Contig	"CMC, Vellore"	SAMN05771014	GCA_001742095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/095/GCA_001742095.1_ASM174209v1	-	TH2031
Helicobacter cinaedi CCUG 18818 = ATCC BAA-847	537971	PRJDB113	170143	Proteobacteria	delta/epsilon subdivisions	2.24013	38.3	chromosome 1:NC_020555.1/AP012492.1	-	1	2321	2208	7/19/12	4/8/17	Complete Genome	National Center for Global Health and Medicine	SAMD00061010	GCA_000349975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/975/GCA_000349975.1_ASM34997v1	23012276	ATCC BAA-847
Yersinia enterocolitica subsp. palearctica YE-149	1329365	PRJNA200684	200684	Proteobacteria	Gammaproteobacteria	4.54192	46.9	-	ASHV01	100	4339	3961	5/28/13	3/24/17	Contig	Max von Pettenkofer-Institut	SAMN02403949	GCA_000401935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/935/GCA_000401935.1_YE-149_1.0	23846271	YE-149
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.07611	41.6	-	JJPD01	209	3525	3282	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708975	GCA_000979515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/515/GCA_000979515.1_gtlEnvA5udCFS	25756680	3.F.A.2.12
Leuconostoc mesenteroides subsp. cremoris	33965	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.64533	38	-	MPEI01	113	1782	1424	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981481	GCA_002092415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/415/GCA_002092415.1_ASM209241v1	28217118	LMGCF19
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.26494	40.2	-	FPMM01	204	1097	988	5/10/17	5/24/17	Scaffold	WTSI	SAMEA1094371	GCA_900118655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/655/GCA_900118655.1_7067_6_75	-	09_04
Serratia marcescens MC458	1333580	PRJNA203054	203054	Proteobacteria	Gammaproteobacteria	5.40209	59.2	-	ATOL01	156	5246	5036	7/3/13	3/24/17	Scaffold	The Genome Institute	SAMN02436823	GCA_000418915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/915/GCA_000418915.1_S_marcescensMC458-1.0	-	MC458
Taylorella asinigenitalis MCE3	1008459	PRJNA66041	66041	Proteobacteria	Betaproteobacteria	1.63856	38.3	chromosome:NC_016043.1/CP003059.1	-	1	1556	1485	9/28/11	4/7/17	Complete Genome	Anses	SAMN02602982	GCA_000226625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/625/GCA_000226625.1_ASM22662v1	22235352	MCE3
Mannheimia haemolytica	75985	PRJNA181191	181191	Proteobacteria	Gammaproteobacteria	2.57858	41.1	-	LFYB01	158	2683	2464	3/23/16	4/5/17	Contig	Agriculture and Agri-Food Canada	SAMN03840568	GCA_001596665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/665/GCA_001596665.1_ASM159666v1	26926339	535A
Lactobacillus brevis	1580	PRJEB17528	359565	Terrabacteria group	Firmicutes	2.44921	45.9	-	FPCN01	144	2460	2246	12/31/16	5/31/17	Contig	Microbiology and Fermentation	SAMEA4527924	GCA_900117015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/015/GCA_900117015.1_ASM90011701v1	-	-
Campylobacter coli Z163	887314	PRJNA52765	52765	Proteobacteria	delta/epsilon subdivisions	1.67729	31.3	-	AIMK01	105	1755	1663	3/16/12	3/15/17	Contig	Cornell University	SAMN02429053	GCA_000253455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/455/GCA_000253455.2_ASM25345v2	-	Z163
Burkholderia sp. SJ98	406819	PRJNA81431	81431	Proteobacteria	Betaproteobacteria	7.87873	62.7	-	AJHK02	14	7394	7116	3/26/12	5/18/17	Contig	"Institute of Microbial Technology,Chandigarh,INDIA"	SAMN02141584	GCA_000256585.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/585/GCA_000256585.3_ASM25658v3	22628512	SJ98
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.39154	66.7	-	LPCM01	153	6859	6480	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449403	GCA_001528495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/495/GCA_001528495.1_ASM152849v1	-	AU15829
Propionibacterium acnes HL072PA1	765074	PRJNA49179	49179	Terrabacteria group	Actinobacteria	2.52416	60.1	-	ADZF01	22	2558	2427	7/29/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189234	GCA_000144245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/245/GCA_000144245.1_ASM14424v1	-	HL072PA1
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.49283	32.7	-	CUDF01	82	2449	2336	3/31/15	3/26/17	Contig	SC	SAMEA1035107	GCA_001227745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/745/GCA_001227745.1_7067_4_47	-	51-20
Proteus mirabilis	584	PRJNA266008	266008	Proteobacteria	Gammaproteobacteria	4.05447	39.1	-	JSUO01	204	3782	3564	12/8/15	4/4/17	Contig	Trinity College Dublin	SAMN03154481	GCA_001462475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/475/GCA_001462475.1_ASM146247v1	26865983	PM655
Enterobacter cloacae UCICRE 12	1329856	PRJNA201997	201997	Proteobacteria	Gammaproteobacteria	5.21054	55.5	-	AYID01	21	5188	4833	10/30/13	4/20/17	Scaffold	Broad Institute	SAMN02138617	GCA_000492435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/435/GCA_000492435.1_Ente_cloa_UCI_12_V1	-	UCICRE 12
Cronobacter sakazakii E899	930780	PRJNA60533	60533	Proteobacteria	Gammaproteobacteria	3.95731	57.5	-	AFMO01	385	3917	3286	5/25/11	3/30/17	Contig	FDA	SAMN02952882	GCA_000214745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/745/GCA_000214745.2_ASM21474v2	21952538	E899
Klebsiella oxytoca	571	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.59383	57.1	-	JVXP01	254	5686	5369	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197201	GCA_001052475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/475/GCA_001052475.1_ASM105247v1	26230489	1236_KOXY
Lactobacillus salivarius	1624	PRJNA321782	321782	Terrabacteria group	Firmicutes	2.33817	32.8	-	LXZD01	246	2361	2139	9/12/17	9/14/17	Contig	Seoul National University	SAMN05003807	GCA_002289795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/795/GCA_002289795.1_ASM228979v1	-	KLW004
Moraxella catarrhalis	480	PRJNA297370	297370	Proteobacteria	Gammaproteobacteria	2.13223	43.6	-	LXHC01	29	2011	1849	6/3/16	4/5/17	Contig	Drexel University College of Medicine	SAMN04122867	GCA_001656355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/355/GCA_001656355.1_ASM165635v1	26912404	Z7542
Mycobacterium abscessus subsp. bolletii BD	1091046	PRJNA73695	73695	Terrabacteria group	Actinobacteria	5.04801	64.1	-	AHAS01	22	5015	4858	12/20/11	5/19/17	Contig	Chungnam National University	SAMN02470911	GCA_000239035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/035/GCA_000239035.2_ASM23903v2	22535937	BD
Bifidobacterium breve	1685	PRJDB4597	325619	Terrabacteria group	Actinobacteria	2.32499	58.6	-	BCXQ01	15	2045	1867	6/10/16	4/5/17	Contig	Yakult Central Institute	SAMD00047601	GCA_001685805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/805/GCA_001685805.1_ASM168580v1	27340092	BR-19
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.23812	36.7	-	LPRZ01	17	2387	2247	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305160	GCA_001560405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/405/GCA_001560405.1_NG05B_C06_03	-	NG05B_C06_03
Streptococcus sanguinis	1305	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.31855	42.2	-	JWCU01	2149	-	-	7/10/15	7/13/16	Contig	University of Washington	SAMN03197066	GCA_001070235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/235/GCA_001070235.1_ASM107023v1	26230489	1112_SSAN
Staphylococcus saprophyticus	29385	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.60279	33	-	LMYW01	26	2563	2396	9/28/16	4/5/17	Scaffold	Tufts University	SAMN04244238	GCA_001747325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/325/GCA_001747325.1_ASM174732v1	-	2262
Vibrio sp. Vb278	1191964	PRJEB9086	281999	Proteobacteria	Gammaproteobacteria	5.35974	44.6	-	CVNE01	14	4793	4571	4/21/15	4/17/17	Contig	CENTRE OF MARINE SCIENCES	SAMEA3340379	GCA_000983095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/095/GCA_000983095.1_Vb278	-	Vb278
Pseudomonas stutzeri	316	PRJNA385519	385519	Proteobacteria	Gammaproteobacteria	5.10004	63.3	-	NFZU01	136	4895	4652	6/14/17	6/19/17	Contig	UDRI	SAMN06602340	GCA_002193135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/135/GCA_002193135.1_ASM219313v1	-	19
Aeromonas hydrophila	644	PRJNA265923	265923	Proteobacteria	Gammaproteobacteria	4.91453	60.9	-	JSWA01	183	4637	4361	11/23/14	4/2/17	Contig	University of Malaya	SAMN03162034	GCA_000786315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/315/GCA_000786315.1_ASM78631v1	25700404	M023
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.54463	67.2	-	LOVP01	133	6876	6453	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449206	GCA_001523485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/485/GCA_001523485.1_ASM152348v1	-	MSMB1199
Flavobacterium psychrophilum	96345	PRJEB21067	396411	FCB group	Bacteroidetes/Chlorobi group	2.69756	32.4	-	FYCC01	42	2430	2347	7/29/17	8/7/17	Contig	INRA	SAMEA104125239	GCA_900186375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/375/GCA_900186375.1_FPFI056_V1	-	FI056
Escherichia albertii	208962	PRJDB3047	301492	Proteobacteria	Gammaproteobacteria	5.12026	49.4	-	BBWA01	59	5333	4890	11/6/15	2/25/17	Scaffold	University of Miyazaki	SAMD00026639	GCA_001515005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/005/GCA_001515005.1_ASM151500v1	26537224	K7394
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.78183	47.6	-	MEBZ01	80	3520	3324	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320427	GCA_001883155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/155/GCA_001883155.1_ASM188315v1	-	14/0125-1k
Streptococcus equinus	1335	PRJEB17239	351431	Terrabacteria group	Firmicutes	1.89445	37.7	-	FOZA01	9	1858	1803	11/1/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216416	GCA_900115995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/995/GCA_900115995.1_IMG-taxon_2654588135_annotated_assembly	-	Sb20
Pectobacterium carotovorum subsp. brasiliense	180957	PRJNA255896	255896	Proteobacteria	Gammaproteobacteria	4.70627	51.3	-	JPSO01	75	4314	4042	8/6/14	4/2/17	Scaffold	Canadian Food Inspection Agency	SAMN02947974	GCA_000738125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/125/GCA_000738125.1_ASM73812v1	25858837	CFIA1033
Lactobacillus crispatus	47770	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.18826	36.9	-	LYQR01	69	2259	2031	7/14/17	7/17/17	Scaffold	University of Minnesota	SAMN04498973	GCA_002218615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/615/GCA_002218615.1_ASM221861v1	-	UMNLC1
Aggregatibacter actinomycetemcomitans D17P-3	754505	PRJNA47331	47331	Proteobacteria	Gammaproteobacteria	2.28435	44.3	-	ADOA02	123	2314	2136	10/3/11	4/4/17	Scaffold	"Bumgarner laboratory, Department of Microbiology, University of Washington"	SAMN02471984	GCA_000240985.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/985/GCA_000240985.3_AaD17P-3v2.0	-	D17P-3
Gardnerella vaginalis 284V	698950	PRJNA42431	42431	Terrabacteria group	Actinobacteria	1.65084	41.2	-	ADEL01	16	1380	1278	5/21/12	3/30/17	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393773	GCA_000263435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/435/GCA_000263435.1_ASM26343v1	-	284V
Lactobacillus paracasei subsp. paracasei Lpp189	1256203	PRJNA178430	178430	Terrabacteria group	Firmicutes	2.92326	46.2	-	ANJY01	295	3155	2766	6/11/13	4/1/17	Contig	Danone Research	SAMN02469702	GCA_000410295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/295/GCA_000410295.1_ASM41029v1	23894338	Lpp189
Staphylococcus hominis	1290	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.20323	31.4	-	JUYH01	56	2156	2106	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197859	GCA_001073815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/815/GCA_001073815.1_ASM107381v1	26230489	657_SHAE
Staphylococcus capitis	29388	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.55798	32.9	-	JWFD01	43	2446	2367	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197005	GCA_001069155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/155/GCA_001069155.1_ASM106915v1	26230489	104_SEPI
Rhodococcus hoagii	43767	PRJNA316970	316970	Terrabacteria group	Actinobacteria	5.20728	68.8	-	LWHY01	60	4823	4703	4/18/17	6/6/17	Contig	The University of Edinburgh	SAMN04632134	GCA_002095185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/185/GCA_002095185.1_ASM209518v1	27638249	PAM1475
Klebsiella variicola	244366	PRJNA350774	350774	Proteobacteria	Gammaproteobacteria	5.93848	56.9	-	MOSU01	555	6053	5619	6/6/17	6/8/17	Contig	Beijing Institute of Genomics	SAMN05945974	GCA_002174085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/085/GCA_002174085.1_ASM217408v1	-	H39
Acinetobacter nosocomialis	106654	PRJNA322764	322764	Proteobacteria	Gammaproteobacteria	3.9605	38.8	-	MADF01	88	3806	3600	7/6/16	4/5/17	Scaffold	"The First Affiliated Hospital,College of Medicine,Zhejiang University"	SAMN05177796	GCA_001680455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/455/GCA_001680455.1_ASM168045v1	-	HJ14
Streptococcus oralis subsp. oralis	1891914	PRJNA274768	274768	Terrabacteria group	Firmicutes	1.84417	41.4	-	JYGO01	10	1918	1766	3/23/15	4/3/17	Contig	University at Buffalo	SAMN03334898	GCA_000959975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/975/GCA_000959975.1_ASM95997v1	25999552	OP51
Achromobacter xylosoxidans	85698	PRJNA311337	311337	Proteobacteria	Betaproteobacteria	5.83725	65.8	-	LSMI01	120	5364	5214	2/23/16	4/5/17	Scaffold	University of Houston	SAMN04482112	GCA_001566985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/985/GCA_001566985.1_ASM156698v1	-	ADAF13
Pseudoalteromonas sp. P1-9	1710354	PRJNA294442	294442	Proteobacteria	Gammaproteobacteria	4.80805	40.7	-	LKBD01	211	4365	4217	10/20/15	4/11/17	Contig	Hans Knoell Institute	SAMN04026656	GCA_001399975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/975/GCA_001399975.1_ASM139997v1	26679587	P1-9
Vibrio alginolyticus	663	PRJNA274607	274607	Proteobacteria	Gammaproteobacteria	5.10355	44.7	-	JZWD01	40	4854	4659	3/25/15	4/3/17	Scaffold	Annamalai University	SAMN03329625	GCA_000962815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/815/GCA_000962815.1_ASM96281v1	-	TS13
Flexistipes sinusarabici DSM 4947	717231	PRJNA45817	45817	Deferribacteres	Deferribacteres	2.52659	38.3	chromosome:NC_015672.1/CP002858.1	-	1	2398	2293	6/15/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02232022	GCA_000218625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/625/GCA_000218625.1_ASM21862v1	22180813	DSM 4947
Enterobacter asburiae	61645	PRJNA297498	297498	Proteobacteria	Gammaproteobacteria	4.81836	55.4	-	LLJM01	66	4701	4507	12/24/15	4/5/17	Contig	Statens Serum Institut	SAMN04124432	GCA_001482465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/465/GCA_001482465.1_ASM148246v1	-	AMA 497
Brucella sp. CMUL 08	1909733	PRJNA348685	348685	Proteobacteria	Alphaproteobacteria	3.29793	57.2	-	MLJL01	56	3375	3148	1/6/17	4/16/17	Contig	LAU	SAMN05913791	GCA_001938045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/045/GCA_001938045.1_ASM193804v1	-	CMUL 08
Pseudomonas amygdali pv. ulmi	251720	PRJNA287460	287460	Proteobacteria	Gammaproteobacteria	6.40252	57.9	-	LIHQ01	319	6225	5535	1/25/16	4/4/17	Contig	University of Edinburgh	SAMN03992222	GCA_001535915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/915/GCA_001535915.1_ASM153591v1	27145446	CFBP 1407
Xanthomonas euvesicatoria	456327	PRJNA275487	275487	Proteobacteria	Gammaproteobacteria	5.24563	64.6	-	JZLO01	134	4698	4302	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03349321	GCA_001008965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/965/GCA_001008965.1_v1	26089818	259
Acinetobacter pittii	48296	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.96559	38.8	-	LLGH01	328	3976	3716	10/27/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145699	GCA_001415185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/185/GCA_001415185.1_ASM141518v1	-	ABBL077
Leptospira santarosai serovar Grippotyphosa	1933030	PRJNA360567	360567	Spirochaetes	Spirochaetia	4.08319	41.7	-	MTCN01	60	4064	3693	1/15/17	4/10/17	Contig	School of Veterinary Medicine and Animal Science / University of Sao Paulo	SAMN06212381	GCA_001952675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/675/GCA_001952675.1_ASM195267v1	-	LO-9
Citrobacter freundii	546	PRJNA272104	272104	Proteobacteria	Gammaproteobacteria	4.92778	51.7	-	LRPR01	24	4820	4621	2/2/16	4/4/17	Scaffold	The Genome Institute at Washington University	SAMN03842472	GCA_001546285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/285/GCA_001546285.1_ASM154628v1	-	GED7749C
Fusobacterium necrophorum subsp. funduliforme 1_1_36S	742814	PRJNA46417	46417	Fusobacteria	Fusobacteriia	2.3127	34.7	-	ADLZ01	15	3250	3197	1/10/12	1/9/14	Scaffold	Broad Institute	SAMN02463865	GCA_000242215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/215/GCA_000242215.1_Fuso_necr_1_1_36S_V1	-	1_1_36S
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.90571	55.1	-	JUIE01	77	4833	4602	12/16/14	3/25/17	Contig	JCVI	SAMN03012824	GCA_000802865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/865/GCA_000802865.1_SPADES_assembly_of_Enterobacter_cloacae_NDB	-	NDB
Vibrio anguillarum	55601	PRJNA266923	266923	Proteobacteria	Gammaproteobacteria	4.3322	44.6281	chromosome I:CP010076.1; chromosome II:CP010077.1; plasmid pJM1:CP016259.1	-	3	3832	3689	2/7/17	2/7/17	Chromosome	University of Copenhagen	SAMN03176858	GCA_001990065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/065/GCA_001990065.1_ASM199006v1	-	601/90
Kingella kingae KK60	1305775	PRJEB1627	194503	Proteobacteria	Betaproteobacteria	1.99298	46.6	-	CBSR01	1	1900	1618	9/11/13	4/2/17	Scaffold	URMITE	SAMEA2271998	GCA_000470575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/575/GCA_000470575.1_KK60	-	KK60
Streptococcus pseudopneumoniae	257758	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.03473	39.9	-	JVMO01	75	2032	1866	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197489	GCA_001076615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/615/GCA_001076615.1_ASM107661v1	26230489	294_SPSE
Xanthomonas perforans	442694	PRJNA276677	276677	Proteobacteria	Gammaproteobacteria	5.15502	64.9	-	JZVU01	68	4686	4359	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03379877	GCA_001010005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/005/GCA_001010005.1_ASM101000v1	26089818	GEV993
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.22513	54.9	-	LAAX01	66	5217	4979	3/19/15	4/6/17	Contig	JCVI	SAMN03283312	GCA_000957485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/485/GCA_000957485.1_ASM95748v1	-	28944
Aeromonas veronii	654	PRJNA296464	296464	Proteobacteria	Gammaproteobacteria	4.66269	58.6	-	LKJQ01	122	4338	4095	11/19/15	4/4/17	Scaffold	Texas Tech University	SAMN04099651	GCA_001446535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/535/GCA_001446535.1_ASM144653v1	26824353	TTU2014-113AME
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96606	64.1	-	FVFG01	15	4903	4745	3/10/17	3/18/17	Contig	SC	SAMEA2071438	GCA_900132355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/355/GCA_900132355.1_10665_4_67	-	322
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.7311	66.5	-	LOUJ01	136	8108	7657	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449171	GCA_001522875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/875/GCA_001522875.1_ASM152287v1	-	INT3-BP131
Enterococcus hirae	1354	PRJNA267549	267549	Terrabacteria group	Firmicutes	4.18532	39	-	JUPQ01	799	-	-	7/10/15	7/13/16	Contig	University of Washington	SAMN03198084	GCA_001059285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/285/GCA_001059285.1_ASM105928v1	26230489	877_EHIR
Streptococcus sobrinus TCI-374	1074082	PRJNA71931	71931	Terrabacteria group	Firmicutes	2.08505	43.6	-	AGHE01	486	2072	1800	10/6/11	3/30/17	Contig	JCVI	SAMN02436457	GCA_000228365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/365/GCA_000228365.2_SMUT2-NEX_11-374	-	TCI-374
Geobacillus sp. 15	1817673	PRJNA315614	315614	Terrabacteria group	Firmicutes	3.363	52.4	-	LVHZ01	254	3414	3100	4/20/16	4/20/16	Scaffold	University of Groningen	SAMN04566681	GCA_001624615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/624/615/GCA_001624615.1_ASM162461v1	-	15
Mycobacterium chelonae	1774	PRJNA323571	323571	Terrabacteria group	Actinobacteria	5.15256	64	-	MAFF01	41	5118	4964	3/3/17	3/6/17	Contig	LNCC	SAMN05186786	GCA_002013455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/455/GCA_002013455.1_ASM201345v1	-	D16R2
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28346	32.4	chromosome:AP017583.1	-	1	-	-	1/24/17	1/27/17	Chromosome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053865	GCA_002357075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/075/GCA_002357075.1_ASM235707v1	-	3416
Leptospira kirschneri str. H2	1193050	PRJNA167243	167243	Spirochaetes	Spirochaetia	4.6863	36.3	-	AKWQ02	80	4540	4498	10/17/12	12/5/13	Contig	J. Craig Venter Institute	SAMN02436389	GCA_000306515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/515/GCA_000306515.2_gls454082v2.0	-	H2
Salinispora pacifica CNT796	1206102	PRJNA169790	169790	Terrabacteria group	Actinobacteria	5.07374	70	-	AZWM01	99	4772	4346	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597243	GCA_000514735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/735/GCA_000514735.1_ASM51473v1	-	CNT796
Elizabethkingia anophelis	1117645	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	4.09478	35.6	-	MAHS01	16	3794	3696	3/7/17	3/10/17	Contig	CDC	SAMN04482265	GCA_002023235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/235/GCA_002023235.1_ASM202323v1	-	E6809
Pseudomonas sp. B10	118613	PRJEB18869	360726	Proteobacteria	Gammaproteobacteria	5.89739	60	chromosome I:NZ_LT707063.1/LT707063.1	-	1	5362	5213	1/14/17	4/17/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216509	GCA_900156235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/235/GCA_900156235.1_IMG-taxon_2681812804_annotated_assembly	-	B10
Streptomyces sp. Mg1	465541	PRJNA28547	28547	Terrabacteria group	Actinobacteria	7.26037	70.7	-	ABJF01	127	6640	5894	2/28/08	5/19/17	Scaffold	Broad Institute	SAMN02595219	GCA_000154885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/885/GCA_000154885.1_ASM15488v1	-	Mg1
Paeniclostridium sordellii	1505	PRJEB8150	277674	Terrabacteria group	Firmicutes	3.55267	27.3	-	CDNF01	36	3470	3354	3/13/15	4/4/17	Contig	WTSI	SAMEA1572094	GCA_001372875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/875/GCA_001372875.1_SSCC35109	-	SSCC35109
Acinetobacter sp. CIP 101934	1144661	PRJNA183237	183237	Proteobacteria	Gammaproteobacteria	3.206	42.6	-	APRQ01	17	3067	2886	4/16/13	4/10/17	Scaffold	Broad Institute	SAMN01828135	GCA_000369585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/585/GCA_000369585.1_Acin_sp_CIP_101934_V1	-	CIP 101934
Klebsiella sp. NFIX23	1566175	PRJEB16224	348986	Proteobacteria	Gammaproteobacteria	5.28278	58.1	-	FMXI01	21	5220	4971	10/20/16	7/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159500	GCA_900103465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/465/GCA_900103465.1_IMG-taxon_2600255255_annotated_assembly	-	NFIX23
Flavobacterium sp. ACN2	1975676	PRJNA341585	341585	FCB group	Bacteroidetes/Chlorobi group	5.39756	33.8	-	MRCM01	47	4699	4581	9/15/17	9/18/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05954931	GCA_002303885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/885/GCA_002303885.1_ASM230388v1	-	ACN2
Bacillus sp. SB47	1071079	PRJNA209232	209232	Terrabacteria group	Firmicutes	4.46892	45.5	-	ATNR01	10	4563	4356	9/10/13	4/9/17	Scaffold	Directorate of Groundnut Research (Indian Council of Agricultural Research)	SAMN02469737	GCA_000465445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/445/GCA_000465445.1_GS_De_Novo_Assembly	24115544	SB47
Clostridium sp. HMSC19A10	1581148	PRJNA269807	269807	Terrabacteria group	Firmicutes	4.53858	28.6	-	LWPS01	100	4068	3928	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436138	GCA_001815925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/925/GCA_001815925.1_ASM181592v1	-	HMSC19A10
Sphingomonas sp. Root710	1736594	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	4.7723	64.5	-	LMIB01	21	4572	4437	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155863	GCA_001429065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/065/GCA_001429065.1_Root710	26633631	Root710
Synechococcus sp. PCC 7335	91464	PRJNA19377	19377	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.97356	48.2	-	ABRV01	11	5174	4986	7/8/08	4/17/17	Scaffold	Gordon and Betty Moore Foundation Microbial Genome Sequencing Project	SAMN02436177	GCA_000155595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/595/GCA_000155595.1_ASM15559v1	-	PCC 7335
Rhodococcus sp. RD6.2	260936	PRJEB8922	284793	Terrabacteria group	Actinobacteria	5.57246	68.4	-	CVQP01	13	5089	4947	5/23/15	4/17/17	Contig	IINFACTS	SAMEA3297057	GCA_001040705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/040/705/GCA_001040705.1_RD6.2	-	RD6.2
Enterobacter sp. MGH 6	1329815	PRJNA201921	201921	Proteobacteria	Gammaproteobacteria	4.99926	55.4	-	JCLR01	6	4927	4662	2/3/14	4/9/17	Scaffold	Broad Institute	SAMN02138546	GCA_000534695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/695/GCA_000534695.1_Ente_cloa_complex_MGH_6_V2	-	MGH 6
Staphylococcus sp. HMSC068D08	1715172	PRJNA296300	296300	Terrabacteria group	Firmicutes	2.57011	33.7	-	LTIQ01	39	2445	2363	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477539	GCA_001810005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/005/GCA_001810005.1_ASM181000v1	-	HMSC068D08
Corynebacterium sp. HMSC05D03	1581115	PRJNA269884	269884	Terrabacteria group	Actinobacteria	2.6428	60.6	-	LWOK01	43	2501	2381	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03433347	GCA_001807205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/205/GCA_001807205.1_ASM180720v1	-	HMSC05D03
Arthrobacter sp. Leaf69	1736232	PRJNA297956	297956	Terrabacteria group	Actinobacteria	4.14055	67	-	LMLR01	17	3763	3627	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151612	GCA_001422645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/645/GCA_001422645.1_Leaf69	26633631	Leaf69
Bradyrhizobium sp. CCBAU 15635	1128180	PRJNA77219	77219	Proteobacteria	Alphaproteobacteria	8.28871	63.8	-	AJQH01	456	8091	7410	5/3/12	5/18/17	Contig	China Agricultural University	SAMN02469488	GCA_000261745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/745/GCA_000261745.1_15635	22586130	CCBAU 15635
Streptococcus sp. HMSC074B11	1715098	PRJNA296226	296226	Terrabacteria group	Firmicutes	2.1305	39.1	-	LTLD01	101	2126	1965	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477510	GCA_001808705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/705/GCA_001808705.1_ASM180870v1	-	HMSC074B11
Mycobacterium sp. 012931	1187065	PRJNA178079	178079	Terrabacteria group	Actinobacteria	5.75936	65.7	-	AOPX01	1	5133	4525	7/8/13	4/17/17	Contig	Gyeongsang National University	SAMN02469866	GCA_000419295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/295/GCA_000419295.1_SP	23929466	12931
Pantoea sp. YR525	1884372	PRJEB17591	351940	Proteobacteria	Gammaproteobacteria	5.27687	54.6	-	FPBU01	27	4835	4711	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05518864	GCA_900116775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/775/GCA_900116775.1_IMG-taxon_2690315619_annotated_assembly	-	YR525
Prevotella sp. 109	1676614	PRJNA288289	288289	FCB group	Bacteroidetes/Chlorobi group	3.78833	45.7	-	LFQU01	85	2943	2783	8/26/15	4/11/17	Contig	Pirogov Russian National Research Medical University	SAMN03797675	GCA_001275135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/135/GCA_001275135.1_ASM127513v1	-	109
Enterococcus sp. HMSC035B04	1715144	PRJNA296272	296272	Terrabacteria group	Firmicutes	2.69673	37.7	-	LTRU01	244	2753	2608	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498638	GCA_001835985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/985/GCA_001835985.1_ASM183598v1	-	HMSC035B04
Novosphingobium sp. 35-62-5	1970411	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	3.02924	61.9	-	NCFC01	932	3401	3174	8/16/17	8/16/17	Scaffold	None	SAMN06622330	GCA_002280995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/995/GCA_002280995.1_ASM228099v1	-	-
Treponema sp. UBA1634	1947701	PRJNA348753	348753	Spirochaetes	Spirochaetia	2.64756	36.7	-	DCMA01	219	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456997	GCA_002321205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/205/GCA_002321205.1_ASM232120v1	28894102	-
uncultured Citrobacter sp.	200446	PRJEB13530	390591	Proteobacteria	Gammaproteobacteria	4.8012	51.7	-	FLUB01	7	4625	4455	6/15/17	6/15/17	Scaffold	Genoscope CEA	SAMEA3931513	GCA_900079745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/745/GCA_900079745.1_APW_PRJEB13530_v1	-	-
Methylobacterium sp. 88A	1131813	PRJNA165571	165571	Proteobacteria	Alphaproteobacteria	4.8893	67.1	-	AQVT01	4	4531	4372	4/20/13	5/19/17	Contig	DOE Joint Genome Institute	SAMN02256484	GCA_000376345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/345/GCA_000376345.1_ASM37634v1	-	88A
Nocardioides sp. AN3	285040	PRJDB906	245948	Terrabacteria group	Actinobacteria	3.99207	67.7	-	BBEZ01	2498	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016822	GCA_001312985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/985/GCA_001312985.1_ASM131298v1	-	JCM 18899
Erythrobacter sp. SCN 68-10	1660098	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	0.377526	68	-	MEDV01	57	388	314	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652441	GCA_001724195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/195/GCA_001724195.1_ASM172419v1	26031303	-
Marinobacter sp. 34-60-7	1970395	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	2.83227	59.8	-	NCJO01	1005	3238	2893	8/16/17	8/16/17	Scaffold	None	SAMN06622214	GCA_002282495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/495/GCA_002282495.1_ASM228249v1	-	-
Acidovorax sp. 202149	1914868	PRJNA352161	352161	Proteobacteria	Betaproteobacteria	3.43936	59.6	-	MPOE01	34	3199	2984	2/16/17	4/17/17	Scaffold	The First Quanzhou Hospital	SAMN05967416	GCA_002002425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/425/GCA_002002425.1_ASM200242v1	-	202149
Psychrobacter sp. JCM 18903	1298610	PRJDB886	240167	Proteobacteria	Gammaproteobacteria	3.42796	42.7	-	BAWJ01	56	3044	3004	3/5/14	5/2/14	Contig	The University of Tokyo	SAMD00000012	GCA_000586475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/475/GCA_000586475.1_ASM58647v1	24699965	JCM 18903
Eubacterium sp. 36_13	1897001	PRJNA321218	321218	Terrabacteria group	Firmicutes	2.34079	36.4	-	MNSH01	60	2188	2030	12/23/16	12/23/16	Scaffold	None	SAMN05717265	GCA_001916375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/375/GCA_001916375.1_ASM191637v1	27819664	-
Stenotrophomonas sp. UBA3473	1947555	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.58269	69.7	-	DFRC01	23	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453468	GCA_002378065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/065/GCA_002378065.1_ASM237806v1	28894102	-
Paenibacillus sp. HGF5	908341	PRJNA54029	54029	Terrabacteria group	Firmicutes	6.95006	51.1	-	AEXS01	185	6372	6027	4/15/11	5/19/17	Contig	J. Craig Venter Institute	SAMN00195202	GCA_000204455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/455/GCA_000204455.2_ASM20445v1	-	HGF5
Ruminococcus sp. CAG:624	1262965	PRJEB963	206902	Terrabacteria group	Firmicutes	2.19839	37.4	-	CBKC01	175	1984	1963	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138806	GCA_000438435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/435/GCA_000438435.1_MGS624	-	-
Thioalkalivibrio sp. ALJ20	1158763	PRJNA182417	182417	Proteobacteria	Gammaproteobacteria	2.96566	65.4	-	ARKO01	5	2948	2818	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440472	GCA_000378585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/585/GCA_000378585.1_ASM37858v1	-	ALJ20
Bacteroides sp. An279	1965620	PRJNA377666	377666	FCB group	Bacteroidetes/Chlorobi group	3.93719	45.8	-	NFJA01	219	3318	3115	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473706	GCA_002159615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/615/GCA_002159615.1_ASM215961v1	-	An279
Exiguobacterium sp. UBA4960	1946496	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.70971	48.5	-	DHAG01	48	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450664	GCA_002398685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/685/GCA_002398685.1_ASM239868v1	28894102	-
Prochlorococcus sp. W7	613198	PRJNA169364	169364	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.905221	30.7	-	ALPE01	109	-	-	8/20/12	7/29/15	Contig	Massachusetts Institute of Technology	SAMN02470468	GCA_000291805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/805/GCA_000291805.1_ProW7_v1.0	22895163	-
Actinomyces sp. ICM39	1105029	PRJNA78553	78553	Terrabacteria group	Actinobacteria	2.26766	65.5	-	ALCB01	146	1980	1857	7/30/12	4/7/17	Contig	J. Craig Venter Institute	SAMN00828786	GCA_000282935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/935/GCA_000282935.1_AspICM39v1.0	-	ICM39
Campylobacter sp. BCW_6873	1903286	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.8644	30.1	-	MJWS01	114	1966	1770	10/4/16	4/13/17	Scaffold	University of California at Davis	SAMN03360220	GCA_001762365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/365/GCA_001762365.1_ASM176236v1	-	BCW_6873
Propionibacterium sp. CG1_02_60_36	1805326	PRJNA297582	297582	Terrabacteria group	Actinobacteria	2.45149	60.2	-	MNWQ01	80	2348	2229	11/9/16	11/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04328235	GCA_001872645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/872/645/GCA_001872645.1_ASM187264v1	27112493	-
Neisseria sp. HMSC069H12	1739376	PRJNA300026	300026	Proteobacteria	Betaproteobacteria	2.27235	49.1	-	LTXW01	75	2265	2079	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480040	GCA_001812735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/735/GCA_001812735.1_ASM181273v1	-	HMSC069H12
Sphingobacterium sp. UBA3476	1947494	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.86257	39.7	-	DFQZ01	20	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453473	GCA_002378015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/015/GCA_002378015.1_ASM237801v1	28894102	-
Rothia sp. HMSC065D02	1739518	PRJNA300169	300169	Terrabacteria group	Actinobacteria	2.4787	53.9	-	LTTG01	35	2153	2031	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480436	GCA_001815285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/285/GCA_001815285.1_ASM181528v1	-	HMSC065D02
Sphingobium sp. YR657	1884366	PRJEB18391	355777	Proteobacteria	Alphaproteobacteria	5.14654	64.4	-	FRCG01	40	4769	4647	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05518668	GCA_900142815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/815/GCA_900142815.1_IMG-taxon_2687453679_annotated_assembly	-	YR657
Halomonas sp. HG01	1609967	PRJNA273864	273864	Proteobacteria	Gammaproteobacteria	3.66003	67.9	-	LAEZ01	41	3408	3216	4/3/15	4/10/17	Scaffold	University of Sao Paulo	SAMN03366765	GCA_000968715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/715/GCA_000968715.1_ASM96871v1	26798101	HG01
Rhizobium sp. Root1212	1736429	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	5.34526	61.8	-	LMDA01	28	5033	4851	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155698	GCA_001424985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/985/GCA_001424985.1_Root1212	26633631	Root1212
Methylophaga sp. UBA3603	1946887	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.01504	45	-	DFMC01	11	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457080	GCA_002375335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/335/GCA_002375335.1_ASM237533v1	28894102	-
Chryseobacterium sp. Leaf180	1736289	PRJNA297956	297956	FCB group	Bacteroidetes/Chlorobi group	3.35378	38.3	-	LMPJ01	15	3139	3034	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151669	GCA_001424585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/585/GCA_001424585.1_Leaf180	26633631	Leaf180
Mesorhizobium sp. LNJC380A00	1287264	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	5.75666	62.9	-	AYWL01	45	5668	5334	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359669	GCA_000502495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/495/GCA_000502495.1_Mloti_LNJC380A00	-	LNJC380A00
Variovorax sp. JGI 0001016-C20	1286837	PRJNA187230	187230	Proteobacteria	Betaproteobacteria	0.775561	66.3	-	AXXB01	60	-	-	10/25/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441108	GCA_000482925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/925/GCA_000482925.1_ASM48292v1	-	JGI 0001016-C20
Xanthomonas translucens	343	PRJNA302486	302486	Proteobacteria	Gammaproteobacteria	4.83439	68.1	-	LNVO01	171	4179	3772	12/8/15	4/5/17	Scaffold	Kansas State University	SAMN04279078	GCA_001462095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/095/GCA_001462095.1_ASM146209v1	-	LG48
Hyphomonas sp. UBA3973	1946627	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.29424	58.5	-	DGCR01	5	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452017	GCA_002385025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/025/GCA_002385025.1_ASM238502v1	28894102	-
Microbacterium sp. CH12i	1479651	PRJNA242700	242700	Terrabacteria group	Actinobacteria	3.35476	63.8	-	JHET01	21	3370	2697	5/7/14	4/9/17	Contig	CMEG	SAMN02708520	GCA_000685355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/355/GCA_000685355.1_Microbacteriumx4	25125643	CH12i
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.78679	58.8	-	LNXD01	63	4588	4450	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339868	GCA_001681815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/815/GCA_001681815.1_ASM168181v1	-	S1689
Streptomyces rimosus	1927	PRJNA242829	242829	Terrabacteria group	Actinobacteria	8.19754	72.1	-	JMGX01	88	7195	6821	6/13/14	3/9/17	Scaffold	TU Kaiserslautern	SAMN02730067	GCA_000707945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/945/GCA_000707945.1_mv9-51	25035320	R6-500MV9
Butyrivibrio sp. M55	1855323	PRJEB17596	351945	Terrabacteria group	Firmicutes	3.66631	40.8	-	FPCD01	38	3397	3296	11/2/16	8/3/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216540	GCA_900116865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/865/GCA_900116865.1_IMG-taxon_2654588120_annotated_assembly	-	M55
Sphingopyxis sp. A083	1759083	PRJNA294421	294421	Proteobacteria	Alphaproteobacteria	3.59484	65.2	-	LNSK01	25	3497	3393	12/15/15	4/11/17	Contig	US EPA	SAMN04256164	GCA_001468495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/495/GCA_001468495.1_ASM146849v1	-	A083
Streptococcus pyogenes MGAS10750	370554	PRJNA16366	16366	Terrabacteria group	Firmicutes	1.93711	38.3	chromosome:NC_008024.1/CP000262.1	-	1	1983	1804	5/4/06	3/22/17	Complete Genome	Lab of Human Bacterial Pathogenesis	SAMN02603504	GCA_000013545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/545/GCA_000013545.1_ASM1354v1	16636287	MGAS10750
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.38882	34.6	-	LZGQ01	10	2149	2066	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179593	GCA_001690775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/775/GCA_001690775.1_ASM169077v1	-	M1-2G
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.09428	41.8	-	FTQB01	1	985	922	3/18/17	3/24/17	Scaffold	Functional Genomics Genter Zurich	SAMEA4555939	GCA_900149545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/545/GCA_900149545.1_5-22b	-	-
Salinivibrio sp. ML318	1909470	PRJNA368690	368690	Proteobacteria	Gammaproteobacteria	3.36148	50.7	-	MUEQ01	96	3134	2973	2/14/17	2/22/17	Scaffold	Universidad de Sevilla	SAMN06270077	GCA_001995885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/885/GCA_001995885.1_ASM199588v1	-	ML318
Klebsiella michiganensis	1134687	PRJNA246471	246471	Proteobacteria	Gammaproteobacteria	7.14848	55.5	-	MRWY01	12	7211	6640	1/6/17	2/22/17	Contig	University of Oxford	SAMN03733822	GCA_001938605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/605/GCA_001938605.1_ASM193860v1	-	CAV1755
Achromobacter sp. 2789STDY5608606	1806504	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	7.03092	67.2	-	CYTI01	56	6514	6314	9/19/15	4/11/17	Scaffold	SC	SAMEA2247571	GCA_001299055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/055/GCA_001299055.1_11861_6_1	-	2789STDY5608606
Paenibacillus odorifer	189426	PRJNA343020	343020	Terrabacteria group	Firmicutes	7.31409	44	-	MPTV01	115	6548	6374	1/18/17	4/6/17	Contig	Cornell University	SAMN05772519	GCA_001955845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/845/GCA_001955845.1_ASM195584v1	-	FSL H8-0237
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.55619	50.8	-	MPQJ01	54	2481	2395	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016256	GCA_002020515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/515/GCA_002020515.1_ASM202051v1	-	-
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.72487	32.3	-	FQKZ01	15	2688	2519	11/24/16	4/5/17	Contig	SC	SAMEA3449108	GCA_900126785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/785/GCA_900126785.1_17175_3_52	-	3688STDY6125106
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.72082	57.3	-	NFWQ01	126	5896	5540	6/9/17	6/12/17	Contig	JCVI	SAMN05960914	GCA_002187935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/935/GCA_002187935.1_ASM218793v1	-	G747
Enterobacter kobei	208224	PRJEB18893	360760	Proteobacteria	Gammaproteobacteria	4.70033	55.5	-	FTNJ01	38	4555	4424	1/14/17	1/14/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444841	GCA_900156385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/385/GCA_900156385.1_IMG-taxon_2681812896_annotated_assembly	-	ATCC BAA-260
Proteiniphilum sp. UBA4879	1947257	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.96787	42.1	-	DHDJ01	62	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456584	GCA_002399305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/305/GCA_002399305.1_ASM239930v1	28894102	-
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.71131	66.8	-	LPJK01	86	6152	5876	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449589	GCA_001533385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/385/GCA_001533385.1_ASM153338v1	-	MSMB2204WGS
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.72747	67.6	-	LPKK01	134	7007	6623	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449617	GCA_001532925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/925/GCA_001532925.1_ASM153292v1	-	MSMB642WGS
Xanthomonas axonopodis pv. manihotis str. IBSBF 2820	1185688	PRJNA163771	163771	Proteobacteria	Gammaproteobacteria	4.93043	65.1	-	AKDT01	150	4397	4080	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090324	GCA_000266145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/145/GCA_000266145.1_IBSBF2820	22699502	IBSBF 2820
Xanthomonas axonopodis pv. manihotis str. IBSBF 2821	1185689	PRJNA163773	163773	Proteobacteria	Gammaproteobacteria	4.90696	65.1	-	AKDU01	161	4373	4055	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090325	GCA_000266165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/165/GCA_000266165.1_IBSBF2821	22699502	IBSBF 2821
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.73092	67.6	-	LPKJ01	131	7011	6619	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449616	GCA_001532985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/985/GCA_001532985.1_ASM153298v1	-	MSMB618WGS
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.21746	66.3	-	LPLZ01	99	6665	6262	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449659	GCA_001533805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/805/GCA_001533805.1_ASM153380v1	-	MSMB793WGS
Proteiniphilum sp. UBA4846	1947256	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.02298	46.4	-	DHEQ01	79	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452759	GCA_002399965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/965/GCA_002399965.1_ASM239996v1	28894102	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.37933	57.8	-	NFWX01	46	5409	5147	6/9/17	6/12/17	Contig	JCVI	SAMN05960940	GCA_002187945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/945/GCA_002187945.1_ASM218794v1	-	G4704
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.80757	32.3	-	FQLE01	16	2813	2637	11/23/16	4/5/17	Contig	SC	SAMEA3449110	GCA_900126795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/795/GCA_900126795.1_17175_3_54	-	3688STDY6125108
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.72623	50.8	-	MPQL01	64	2637	2545	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016258	GCA_002020525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/525/GCA_002020525.1_ASM202052v1	-	-
Paenibacillus odorifer	189426	PRJNA385758	385758	Terrabacteria group	Firmicutes	6.80282	44.1	-	NFUZ01	245	5990	5853	8/22/17	8/24/17	Scaffold	VTT Technical Research Centre of Finland	SAMN06909694	GCA_002264345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/345/GCA_002264345.1_ASM226434v1	-	VTT E-133288
Achromobacter sp. ATCC13047	1806483	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	5.45748	54.6	-	CYTA01	110	5495	5218	9/19/15	4/11/17	Scaffold	SC	SAMEA2247599	GCA_001299075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/075/GCA_001299075.1_11861_6_26	-	ATCC 13047
Klebsiella michiganensis	1134687	PRJNA353361	353361	Proteobacteria	Gammaproteobacteria	6.514	55.6	-	MPJB01	183	6504	6145	1/11/17	2/22/17	Contig	New Jersey Medical School-Rutgers University	SAMN06014568	GCA_001945455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/455/GCA_001945455.1_ASM194545v1	-	97_38
Salinivibrio sp. MA427	1909455	PRJNA368799	368799	Proteobacteria	Gammaproteobacteria	3.26351	49.5	-	MUFH01	513	3167	2745	2/14/17	2/23/17	Scaffold	Universidad de Sevilla	SAMN06272995	GCA_001996115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/115/GCA_001996115.1_ASM199611v1	-	MA427
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.07208	41.7	-	FTQR01	3	971	905	3/18/17	4/10/17	Scaffold	Functional Genomics Genter Zurich	SAMEA4555935	GCA_900149635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/635/GCA_900149635.1_6-17a	-	-
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.83208	35.2	-	LZGU01	137	2708	2511	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179620	GCA_001690795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/795/GCA_001690795.1_ASM169079v1	-	HK7
Legionella pneumophila subsp. pneumophila str. Philadelphia 1	272624	PRJNA22	22	Proteobacteria	Gammaproteobacteria	3.39775	38.3	chromosome:NC_002942.5/AE017354.1	-	1	3003	2943	10/15/01	1/11/17	Complete Genome	Columbia Genome Center	SAMN02603156	GCA_000008485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/485/GCA_000008485.1_ASM848v1	15448271	Philadelphia 1
Sphingopyxis sp. KK2	1855727	PRJNA214105	214105	Proteobacteria	Alphaproteobacteria	4.33694	66.2	-	LYVN01	320	4354	4037	2/3/17	4/17/17	Contig	Georgia Institute of Technology	SAMN05161776	GCA_001990265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/265/GCA_001990265.1_ASM199026v1	-	KK2
Butyrivibrio sp. INlla14	1520808	PRJEB15856	347794	Terrabacteria group	Firmicutes	4.19479	40.6	-	FMVS01	79	3775	3583	10/17/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910371	GCA_900102515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/515/GCA_900102515.1_IMG-taxon_2593339224_annotated_assembly	-	INlla14
Streptomyces rimosus	1927	PRJNA242833	242833	Terrabacteria group	Actinobacteria	8.38617	72.1	-	JMGY01	375	7396	6728	6/13/14	3/9/17	Scaffold	TU Kaiserslautern	SAMN02730068	GCA_000707965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/965/GCA_000707965.1_rev-51	25035320	R6-500MV9-R8
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.65963	58.9	-	LNXE01	63	4432	4294	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339869	GCA_001681825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/825/GCA_001681825.1_ASM168182v1	-	S1847
Microbacterium sp. Cr-K1W	1452537	PRJNA236112	236112	Terrabacteria group	Actinobacteria	3.91334	68.6	-	JARF01	44	3778	3662	6/16/14	4/9/17	Contig	Central Michigan University	SAMN02594833	GCA_000708305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/305/GCA_000708305.1_Cr-K1W	-	Cr-K1W
Hyphomonas sp. UBA4510	1946634	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.39227	58.3	-	DGMU01	25	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450763	GCA_002388565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/565/GCA_002388565.1_ASM238856v1	28894102	-
Xanthomonas translucens	343	PRJNA302486	302486	Proteobacteria	Gammaproteobacteria	4.53959	68	-	LNVV01	154	3888	3527	12/8/15	4/4/17	Scaffold	Kansas State University	SAMN04279071	GCA_001462145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/145/GCA_001462145.1_ASM146214v1	-	XT5791
Variovorax sp. JGI 0001014-H11	1286836	PRJNA187229	187229	Proteobacteria	Betaproteobacteria	1.18053	65.7	-	AXXC01	110	-	-	10/25/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441428	GCA_000482945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/945/GCA_000482945.1_ASM48294v1	-	JGI 0001014-H11
Mesorhizobium sp. LNJC386A00	1287270	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.17857	62.7	-	AYWJ01	31	6065	5695	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359671	GCA_000502515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/515/GCA_000502515.1_Mloti_LNJC386A00	-	LNJC386A00
Chryseobacterium sp. JAH	1742858	PRJNA299507	299507	FCB group	Bacteroidetes/Chlorobi group	3.87455	35.2	-	LMAH01	16	3580	3488	1/7/16	4/11/17	Contig	GCAT-SEEK	SAMN04209271	GCA_001507335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/335/GCA_001507335.1_ASM150733v1	-	JAH
Methylophaga sp. UBA3613	1946888	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.24791	44.6	-	DFLS01	14	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454532	GCA_002375415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/415/GCA_002375415.1_ASM237541v1	28894102	-
Rhizobium sp. Root1220	1736432	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	5.74966	59.6	-	LMDG01	37	5636	5359	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155701	GCA_001426265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/265/GCA_001426265.1_Root1220	26633631	Root1220
Halomonas sp. G11	1684425	PRJNA289975	289975	Proteobacteria	Gammaproteobacteria	3.96329	57.8	-	LYXG01	44	3696	3567	6/16/16	4/12/17	Scaffold	Institute for Biotechnology of Sidi Thabet	SAMN04513427	GCA_001663515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/515/GCA_001663515.1_ASM166351v1	-	G11
Sphingobium sp. SCN 64-10	1660140	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	1.29292	64.4	-	MEFF01	190	1357	1164	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652481	GCA_001725025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/025/GCA_001725025.1_ASM172502v1	26031303	-
Rothia sp. HMSC061C12	1739547	PRJNA300198	300198	Terrabacteria group	Actinobacteria	2.28245	59.5	-	LTSI01	52	1818	1719	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480464	GCA_001815755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/755/GCA_001815755.1_ASM181575v1	-	HMSC061C12
Sphingobacterium sp. UBA3424	1947493	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	5.32163	39.8	-	DFSZ01	85	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451485	GCA_002378775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/775/GCA_002378775.1_ASM237877v1	28894102	-
Neisseria sp. HMSC067G11	1739384	PRJNA300034	300034	Proteobacteria	Betaproteobacteria	2.3022	49.1	-	LTXQ01	55	2290	2153	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480047	GCA_001812885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/885/GCA_001812885.1_ASM181288v1	-	HMSC067G11
Propionibacterium sp. 4572_24	1971622	PRJNA362212	362212	Terrabacteria group	Actinobacteria	1.70684	60.2	-	NBLU01	160	1775	1499	4/10/17	4/10/17	Scaffold	The University of Texas at Austin	SAMN06628326	GCA_002084605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/084/605/GCA_002084605.1_ASM208460v1	-	-
Campylobacter sp. BCW_6874	1903287	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.86435	30.1	-	MJWT01	116	1954	1764	10/4/16	4/13/17	Scaffold	University of California at Davis	SAMN03360221	GCA_001762375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/375/GCA_001762375.1_ASM176237v1	-	BCW_6874
Actinomyces sp. ICM58	1105030	PRJNA78555	78555	Terrabacteria group	Actinobacteria	2.3905	66.5	-	ALIY01	239	2124	1890	7/30/12	4/7/17	Contig	J. Craig Venter Institute	SAMN00828781	GCA_000283035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/035/GCA_000283035.1_AspICM58v1.0	-	ICM58
Prochlorococcus sp. W8	613199	PRJNA169365	169365	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.841756	31.4	-	ALPF01	58	-	-	8/20/12	7/29/15	Contig	Massachusetts Institute of Technology	SAMN02470472	GCA_000291825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/825/GCA_000291825.1_ProW8_v1.0	22895163	-
Bacteroides sp. An269	1965613	PRJNA377666	377666	FCB group	Bacteroidetes/Chlorobi group	4.41491	45.8	-	NFJG01	275	3909	3671	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473699	GCA_002159755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/755/GCA_002159755.1_ASM215975v1	-	An269
Thioalkalivibrio sp. ALJ21	1158764	PRJNA182418	182418	Proteobacteria	Gammaproteobacteria	2.96464	65.4	-	ARKP01	5	2950	2815	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440996	GCA_000378605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/605/GCA_000378605.1_ASM37860v1	-	ALJ21
Ruminococcus sp. A254.MGS-254	1637499	PRJNA277012	277012	Terrabacteria group	Firmicutes	2.91837	47	-	LARB01	843	-	-	4/24/15	4/24/15	Scaffold	The Mayo Clinic	SAMN03449995	GCA_000980235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/235/GCA_000980235.1_ASM98023v1	-	-
Paenibacillus sp. HGF7	944559	PRJNA61827	61827	Terrabacteria group	Firmicutes	6.28298	52.9	-	AFDH01	148	5772	5520	5/20/11	5/19/17	Contig	J. Craig Venter Institute	SAMN00195299	GCA_000214295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/295/GCA_000214295.2_ASM21429v1	-	HGF7
Stenotrophomonas sp. UBA5023	1947556	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.06234	64.7	-	DGXV01	111	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450696	GCA_002396445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/445/GCA_002396445.1_ASM239644v1	28894102	-
Eubacterium sp. 38_16	1897002	PRJNA321218	321218	Terrabacteria group	Firmicutes	2.8406	38	-	MNSI01	75	2533	2363	12/23/16	12/23/16	Scaffold	None	SAMN05717266	GCA_001916385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/385/GCA_001916385.1_ASM191638v1	27819664	-
Psychrobacter sp. 310(2012)	1472682	PRJNA240298	240298	Proteobacteria	Gammaproteobacteria	0.258435	41.4	-	JHOL01	145	-	-	5/12/14	5/5/16	Contig	InDRE	SAMN02769813	GCA_000690075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/075/GCA_000690075.1_Psychrobacter_sp._310_2012_	26546315	-
Acidovorax sp. 121606	1914867	PRJNA352146	352146	Proteobacteria	Betaproteobacteria	3.41938	59.7	-	MPOF01	53	3187	2956	2/16/17	4/17/17	Scaffold	The First Quanzhou Hospital	SAMN05967359	GCA_002002445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/445/GCA_002002445.1_ASM200244v1	-	121606
Marinobacter sp. UBA856	1946827	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.06841	63.2	-	DBGK01	100	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455548	GCA_002295845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/845/GCA_002295845.1_ASM229584v1	28894102	-
Erythrobacter sp. SCN 62-14	1660099	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	2.80271	62	-	MEDW01	136	2708	2525	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652442	GCA_001724215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/215/GCA_001724215.1_ASM172421v1	26031303	-
Nocardioides sp. JCM 18998	1300156	PRJDB907	245949	Terrabacteria group	Actinobacteria	1.74281	67.9	-	BBFA01	1630	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016828	GCA_001313005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/005/GCA_001313005.1_ASM131300v1	-	JCM 18998
Methylobacterium sp. ZNC0032	1339244	PRJNA205581	205581	Proteobacteria	Alphaproteobacteria	4.9376	66.3	-	JROW01	1195	5067	4409	12/11/14	4/10/17	Contig	University of Oregon	SAMN03021518	GCA_000800935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/935/GCA_000800935.1_ZNC0032.1	-	ZNC0032
Novosphingobium sp. 16-62-11	1970405	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.41204	62.6	-	NCGT01	1169	3019	2752	8/16/17	8/16/17	Scaffold	None	SAMN06622287	GCA_002281675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/675/GCA_002281675.1_ASM228167v1	-	-
Enterococcus sp. HMSC035C10	1715072	PRJNA296200	296200	Terrabacteria group	Firmicutes	2.82605	37.7	-	LTRS01	284	2863	2695	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498600	GCA_001836045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/045/GCA_001836045.1_ASM183604v1	-	HMSC035C10
Prevotella sp. P5-126	2024216	PRJNA396820	396820	FCB group	Bacteroidetes/Chlorobi group	3.2816	45.7	-	NPIZ01	118	2750	2624	8/14/17	8/16/17	Contig	University of Ljubljana	SAMN07431228	GCA_002251185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/185/GCA_002251185.1_ASM225118v1	-	P5-126
Pantoea sp. B40	95608	PRJDA69975	69975	Proteobacteria	Gammaproteobacteria	4.64523	53.3	-	BADG01	728	-	-	12/26/12	9/16/15	Contig	Kazusa DNA Research Institute	SAMD00036577	GCA_000333515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/515/GCA_000333515.1_ASM33351v1	-	B40
Mycobacterium sp. UM_WGJ	1370120	PRJNA213251	213251	Terrabacteria group	Actinobacteria	4.47323	67.7	-	AUWR01	116	4178	3980	8/26/13	4/8/17	Contig	"Universiti Malaya, Kuala Lumpur"	SAMN02471858	GCA_000455125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/125/GCA_000455125.1_Mycobacterium_sp_UM_WGJ	-	UM_WGJ
Streptococcus sp. HMSC074F05	1715164	PRJNA296292	296292	Terrabacteria group	Firmicutes	2.09321	41.9	-	LTLB01	21	2043	1915	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477535	GCA_001808725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/725/GCA_001808725.1_ASM180872v1	-	HMSC074F05
Bradyrhizobium sp. CCBAU 41267	502063	PRJNA77219	77219	Proteobacteria	Alphaproteobacteria	9.12183	64	-	AJQI01	563	9076	8388	5/3/12	5/18/17	Contig	China Agricultural University	SAMN02469472	GCA_000261765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/765/GCA_000261765.1_41267	22586130	CCBAU 41267
Arthrobacter sp. Leaf234	1736303	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.52425	69.4	-	LMLU01	12	3272	3146	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151693	GCA_001422665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/665/GCA_001422665.1_Leaf234	26633631	Leaf234
Corynebacterium sp. HMSC05D08	1581116	PRJNA269885	269885	Terrabacteria group	Actinobacteria	2.81277	59.3	-	LWOJ01	85	2636	2483	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03433348	GCA_001807215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/215/GCA_001807215.1_ASM180721v1	-	HMSC05D08
Staphylococcus sp. HMSC076B11	1715173	PRJNA296301	296301	Terrabacteria group	Firmicutes	2.41583	32.7	-	LTIP01	78	2350	2261	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477540	GCA_001810025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/025/GCA_001810025.1_ASM181002v1	-	HMSC076B11
Enterobacter sp. MGH 5	1329814	PRJNA201920	201920	Proteobacteria	Gammaproteobacteria	5.00946	54.9	-	JCLS01	6	4906	4629	2/3/14	4/2/17	Scaffold	Broad Institute	SAMN02138545	GCA_000534715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/715/GCA_000534715.1_Ente_cloa_complex_MGH_5_V2	-	MGH 5
Rhodococcus sp. 311R	1617904	PRJEB8720	283046	Terrabacteria group	Actinobacteria	6.34372	62.6	-	CFHW01	128	5935	5735	3/20/15	4/10/17	Contig	Department Biochemical and Microbial Technology	SAMEA3296592	GCA_001242945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/945/GCA_001242945.1_Rhodococcus_sp._311R	25999565	311R
Synechococcus sp. CC9616	110663	PRJNA89559	89559	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.64591	56.5	-	AZXL01	1	2803	2708	1/3/14	4/17/17	Scaffold	JGI	SAMN02597268	GCA_000515235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/235/GCA_000515235.1_ASM51523v1	-	CC9616
Sphingomonas sp. W16RD	1843236	PRJNA349220	349220	Proteobacteria	Alphaproteobacteria	3.72274	67	-	MOLY01	35	3374	3260	1/6/17	4/17/17	Scaffold	"Institute of Tibetan Plateau Research, Chinese Academy of Sciences"	SAMN05928587	GCA_001956315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/315/GCA_001956315.1_ASM195631v1	-	W16RD
Clostridium sp. Marseille-P2414	1805470	PRJEB13977	321396	Terrabacteria group	Firmicutes	3.79949	28.4	-	FLKB01	4	3611	3370	5/12/16	4/17/17	Scaffold	URMITE	SAMEA3982858	GCA_900086595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/595/GCA_900086595.1_PRJEB13977	-	Marseille-P2414
Bacillus sp. NSP9.1	1071078	PRJNA209222	209222	Terrabacteria group	Firmicutes	4.52057	45.6	-	AUQZ01	8	4664	4435	9/10/13	4/9/17	Scaffold	Directorate of Groundnut Research (Indian Council of Agricultural Research)	SAMN02469740	GCA_000465465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/465/GCA_000465465.1_GS_De_Novo_Assembly	24115550	NSP9.1
Flavobacterium sp. ACN6	1920426	PRJNA341585	341585	FCB group	Bacteroidetes/Chlorobi group	5.12728	33.8	-	MRCQ01	45	4440	4327	9/15/17	9/18/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05967353	GCA_002304005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/005/GCA_002304005.1_ASM230400v1	-	ACN6
Klebsiella sp. NFIX20	1566169	PRJEB16300	348902	Proteobacteria	Gammaproteobacteria	5.21208	58.2	-	FMXY01	18	5096	4873	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159325	GCA_900104465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/465/GCA_900104465.1_IMG-taxon_2602042111_annotated_assembly	-	NFIX20
Acinetobacter sp. NIPH 1847	1217697	PRJNA183236	183236	Proteobacteria	Gammaproteobacteria	3.95409	43	-	APRR01	4	3759	3624	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01087861	GCA_000369605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/605/GCA_000369605.1_Acin_sp_NIPH_1847_V1	-	NIPH 1847
Paeniclostridium sordellii	1505	PRJEB8151	277675	Terrabacteria group	Firmicutes	3.45856	27.4	-	CDNW01	28	3389	3287	3/13/15	4/4/17	Contig	WTSI	SAMEA1572109	GCA_001372895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/895/GCA_001372895.1_SSCC33587	-	SSCC33587
Streptomyces sp. SPB074	465543	PRJNA28549	28549	Terrabacteria group	Actinobacteria	6.97055	71.3	-	ABJG02	2	6102	5091	2/28/08	5/19/17	Scaffold	Broad Institute	SAMN02595220	GCA_000154905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/905/GCA_000154905.1_ASM15490v1	-	SPB074
Pseudomonas sp. A214	1855331	PRJEB18871	360778	Proteobacteria	Gammaproteobacteria	6.07763	60.2	chromosome I:NZ_LT707062.1/LT707062.1	-	1	5446	5268	1/14/17	4/17/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05216504	GCA_900156295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/295/GCA_900156295.1_IMG-taxon_2681812807_annotated_assembly	-	A214
Elizabethkingia anophelis	1117645	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	4.04825	35.7	-	MAHA01	17	3733	3623	3/8/17	3/10/17	Contig	CDC	SAMN05255124	GCA_002023325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/325/GCA_002023325.1_ASM202332v1	-	CSID_3000516074
Salinispora pacifica CNR894	1137261	PRJNA169789	169789	Terrabacteria group	Actinobacteria	5.51802	69.8	-	AZWN01	115	5168	4776	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597244	GCA_000514755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/755/GCA_000514755.1_ASM51475v1	-	CNR894
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28346	32.4	chromosome:AP017582.1	-	1	-	-	1/24/17	1/27/17	Chromosome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053858	GCA_002357095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/095/GCA_002357095.1_ASM235709v1	-	2763
Mycobacterium chelonae	1774	PRJNA323571	323571	Terrabacteria group	Actinobacteria	5.12477	64.1	-	MAFI01	40	5047	4897	3/3/17	3/6/17	Contig	LNCC	SAMN05186789	GCA_002013485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/485/GCA_002013485.1_ASM201348v1	-	D16R9
Streptococcus sobrinus TCI-376	1074083	PRJNA71933	71933	Terrabacteria group	Firmicutes	2.07366	43.7	-	AGHF01	511	2118	1799	10/6/11	3/30/17	Contig	JCVI	SAMN02436540	GCA_000228385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/385/GCA_000228385.2_SMUT2-NEX_12-376	-	TCI-376
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.73438	66.5	-	LOUL01	136	8115	7663	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449173	GCA_001522925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/925/GCA_001522925.1_ASM152292v1	-	INT3-BP133
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98869	64.1	-	FSBP01	25	4945	4802	12/14/16	3/21/17	Contig	SC	SAMEA2068811	GCA_900132405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/405/GCA_900132405.1_10665_4_72	-	327
Aeromonas veronii	654	PRJNA296464	296464	Proteobacteria	Gammaproteobacteria	4.53177	58.7	-	LKJR01	53	4181	3978	11/19/15	4/4/17	Scaffold	Texas Tech University	SAMN04099652	GCA_001446555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/555/GCA_001446555.1_ASM144655v1	26824353	TTU2014-115AME
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.12506	55	-	LAAU01	54	5043	4841	3/19/15	4/6/17	Contig	JCVI	SAMN03283311	GCA_000957525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/525/GCA_000957525.1_ASM95752v1	-	32540
Xanthomonas perforans	442694	PRJNA276680	276680	Proteobacteria	Gammaproteobacteria	5.14646	64.9	-	JZVW01	69	4688	4350	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03379910	GCA_001010035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/035/GCA_001010035.1_ASM101003v1	26089818	GEV1026
Streptococcus pseudopneumoniae	257758	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.08817	40	-	JVGV01	37	2170	2008	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197638	GCA_001076775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/775/GCA_001076775.1_ASM107677v1	26230489	445_SPSE
Kingella kingae KK274	1305595	PRJEB1619	194512	Proteobacteria	Betaproteobacteria	1.99145	46.7	-	CBSM01	1	2002	1697	9/11/13	4/2/17	Scaffold	URMITE	SAMEA2272032	GCA_000470595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/595/GCA_000470595.1_KK274	-	KK274
Vibrio anguillarum	55601	PRJNA267064	267064	Proteobacteria	Gammaproteobacteria	4.25311	44.7073	chromosome I:CP010291.1; chromosome II:CP010292.1; plasmid pJM1:CP016260.1	-	3	3649	3503	2/7/17	2/7/17	Chromosome	University of Copenhagen	SAMN03177521	GCA_001990085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/085/GCA_001990085.1_ASM199008v1	-	6018/1
Enterobacter hormaechei subsp. oharae	301102	PRJNA264581	264581	Proteobacteria	Gammaproteobacteria	5.37356	54.5	-	JSBO01	58	5456	5077	12/17/14	3/25/17	Contig	IOC- FIOCRUZ	SAMN03135815	GCA_000803045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/045/GCA_000803045.1_ASM80304v1	-	CCBH10892
Fusobacterium necrophorum subsp. funduliforme B35	1226633	PRJNA173652	173652	Fusobacteria	Fusobacteriia	2.05481	35	-	AUZI01	42	2438	2368	1/5/15	1/5/15	Contig	Frederick National Laboratory for Cancer Research	SAMN01983953	GCA_000814775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/775/GCA_000814775.1_ASM81477v1	-	B35
Citrobacter freundii	546	PRJNA301444	301444	Proteobacteria	Gammaproteobacteria	4.87767	52	-	LNFS01	79	4789	4340	7/20/16	4/5/17	Scaffold	Agriculture and Agri-Food Canada	SAMN04246388	GCA_001689745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/745/GCA_001689745.1_ASM168974v1	-	A47
Leptospira santarosai serovar Guaricura	508589	PRJNA360567	360567	Spirochaetes	Spirochaetia	4.01539	41.9	-	MTAS01	57	4020	3686	1/15/17	4/6/17	Contig	School of Veterinary Medicine and Animal Science / University of Sao Paulo	SAMN06212380	GCA_001952685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/685/GCA_001952685.1_ASM195268v1	-	M4/98
Acinetobacter pittii	48296	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.073	38.8	-	LLGO01	393	4065	3804	10/27/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145706	GCA_001415245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/245/GCA_001415245.1_ASM141524v1	-	ABBL086
Xanthomonas euvesicatoria	456327	PRJNA275485	275485	Proteobacteria	Gammaproteobacteria	5.2716	64.6	-	JZLM01	106	4743	4345	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03349319	GCA_001008975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/975/GCA_001008975.1_v1	26089818	199
Pseudomonas amygdali pv. aesculi	251722	PRJNA287460	287460	Proteobacteria	Gammaproteobacteria	6.23999	58.3	-	LILK01	311	6048	5379	1/25/16	4/4/17	Contig	University of Edinburgh	SAMN03992138	GCA_001537955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/955/GCA_001537955.1_ASM153795v1	27145446	2329
Brucella sp. CMUL 024	1912098	PRJNA349236	349236	Proteobacteria	Alphaproteobacteria	3.29005	57.2	-	MNBM01	32	3361	3133	1/6/17	4/16/17	Contig	LAU	SAMN05929023	GCA_001938135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/135/GCA_001938135.1_ASM193813v1	-	CMUL 024
Enterobacter asburiae	61645	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.79052	55.7	-	LRCE01	186	4818	4443	1/19/16	4/4/17	Contig	JCVI	SAMN04407772	GCA_001518045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/045/GCA_001518045.1_ASM151804v1	-	GN03205
Legionella pneumophila	446	PRJNA323476	323476	Proteobacteria	Gammaproteobacteria	3.47809	38.2983	chromosome:NZ_CP015939.1/CP015939.1; plasmid unnamed1:NZ_CP015940.1/CP015940.1	-	2	3158	3056	10/6/16	3/28/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05180029	GCA_001753065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/065/GCA_001753065.1_ASM175306v1	27684472	C8_S
Vibrio alginolyticus	663	PRJNA245457	245457	Proteobacteria	Gammaproteobacteria	5.10241	44.5	-	JOKY01	55	4702	4525	8/24/15	4/4/17	Scaffold	East China University of Science and Technology	SAMN02746033	GCA_001273715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/715/GCA_001273715.1_ASM127371v1	-	EPGS
Pseudoalteromonas sp. P1-16-1b	1723757	PRJNA294442	294442	Proteobacteria	Gammaproteobacteria	3.97758	40	-	LKGQ01	90	3636	3535	10/21/15	4/11/17	Contig	Hans Knoell Institute	SAMN04026660	GCA_001401785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/785/GCA_001401785.1_ASM140178v1	26679587	P1-16-1b
Achromobacter xylosoxidans	85698	PRJNA359932	359932	Proteobacteria	Betaproteobacteria	6.69144	67.6	-	MSTP01	193	6311	6039	1/11/17	6/12/17	Scaffold	Universidad Andres Bello	SAMN06198582	GCA_001945385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/385/GCA_001945385.1_ASM194538v1	-	MT3
Streptococcus oralis subsp. oralis	1891914	PRJNA274768	274768	Terrabacteria group	Firmicutes	1.8595	41.1	-	JYGR01	5	1916	1804	3/23/15	4/3/17	Contig	University at Buffalo	SAMN03334901	GCA_000960035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/035/GCA_000960035.1_ASM96003v1	25999552	SK141
Acinetobacter nosocomialis	106654	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.7486	38.7	-	LYGC01	58	3600	3441	11/2/16	4/5/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745526	GCA_001861705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/705/GCA_001861705.1_ASM186170v1	-	XH796
Klebsiella variicola	244366	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.78465	57.2	-	JXJH01	121	5873	5543	6/8/17	6/10/17	Contig	unverisity medical center groningen	SAMN03281119	GCA_002179565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/565/GCA_002179565.1_ASM217956v1	-	KP-21F
Rhodococcus hoagii	43767	PRJNA316970	316970	Terrabacteria group	Actinobacteria	5.20423	68.8	-	LWHX01	41	4842	4729	4/18/17	6/6/17	Contig	The University of Edinburgh	SAMN04632067	GCA_002095195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/195/GCA_002095195.1_ASM209519v1	27638249	PAM1422
Staphylococcus capitis	29388	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.56112	32.8	-	JVSX01	75	2445	2376	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197323	GCA_001069765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/765/GCA_001069765.1_ASM106976v1	26230489	1341_SEPI
Staphylococcus hominis	1290	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.18734	31.4	-	JUSR01	54	2135	2055	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03198006	GCA_001077055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/055/GCA_001077055.1_ASM107705v1	26230489	793_SHAE
Lactobacillus paracasei subsp. paracasei Lpp14	1256204	PRJNA178431	178431	Terrabacteria group	Firmicutes	2.88312	46.3	-	ANJZ01	436	3201	2633	6/11/13	4/1/17	Contig	Danone Research	SAMN02469711	GCA_000410315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/315/GCA_000410315.1_ASM41031v1	23894338	Lpp14
Gardnerella vaginalis 55152	698955	PRJNA42443	42443	Terrabacteria group	Actinobacteria	1.64319	41.3	-	ADEQ01	25	1380	1233	5/21/12	3/30/17	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393778	GCA_000263475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/475/GCA_000263475.1_ASM26347v1	-	55152
Aggregatibacter actinomycetemcomitans serotype c str. D17P-2	754506	PRJNA47335	47335	Proteobacteria	Gammaproteobacteria	2.18795	44.4	-	ADOB02	51	2223	2049	10/3/11	4/4/17	Scaffold	"Bumgarner laboratory, Department of Microbiology, University of Washington"	SAMN02471983	GCA_000241005.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/005/GCA_000241005.3_AaD17P-2v2.0	23194436	D17P-2
Lactobacillus crispatus	47770	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.01803	36.9	-	LYQT01	64	2070	1857	7/14/17	7/17/17	Scaffold	University of Minnesota	SAMN04498975	GCA_002218645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/645/GCA_002218645.1_ASM221864v1	-	UMNLC3
Pectobacterium carotovorum subsp. brasiliense	180957	PRJNA268444	268444	Proteobacteria	Gammaproteobacteria	4.70269	52	-	JUJB01	31	4338	4146	12/29/14	4/2/17	Scaffold	Beijing Academy of Agriculture and Forestry Sciences	SAMN03220250	GCA_000808115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/115/GCA_000808115.1_ASM80811v1	-	YC D49
Pediococcus damnosus	51663	PRJNA290141	290141	Terrabacteria group	Firmicutes	2.17366	38.2955	chromosome:NZ_CP012294.1/CP012294.1; plasmid pL21536-1:NZ_CP012295.1/CP012295.1; plasmid pL21536-2:NZ_CP012296.1/CP012296.1	-	3	2067	1944	4/5/16	4/5/17	Complete Genome	Technische Universitaet Muenchen	SAMN03876485	GCA_001611155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/155/GCA_001611155.1_ASM161115v1	27028007	TMW 2.1536
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.86012	47.6	-	MEBY01	68	3630	3446	11/18/16	4/5/17	Contig	The University of Queensland	SAMN05200557	GCA_001883185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/185/GCA_001883185.1_ASM188318v1	-	AHL1
Escherichia albertii	208962	PRJDB3047	301492	Proteobacteria	Gammaproteobacteria	4.84422	49.7	-	BBWB01	116	4986	4618	11/6/15	2/25/17	Scaffold	University of Miyazaki	SAMD00026640	GCA_001515025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/025/GCA_001515025.1_ASM151502v1	26537224	K7744
Flavobacterium psychrophilum	96345	PRJEB21067	396411	FCB group	Bacteroidetes/Chlorobi group	2.82318	32.4	-	FYCI01	68	2616	2501	7/29/17	8/7/17	Contig	INRA	SAMEA104125236	GCA_900186385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/385/GCA_900186385.1_FPDK095_V1	-	DK095
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.58513	67	-	LOVR01	134	6854	6407	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449208	GCA_001523505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/505/GCA_001523505.1_ASM152350v1	-	MSMB1191
Aeromonas hydrophila	644	PRJNA265924	265924	Proteobacteria	Gammaproteobacteria	4.97435	61.1	-	JSXE01	140	4691	4450	12/17/14	4/2/17	Contig	University of Malaya	SAMN03154072	GCA_000803185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/185/GCA_000803185.1_ASM80318v1	25767237	M062
Pseudomonas stutzeri	316	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.58565	63.9	-	JVYC01	199	4299	4058	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197188	GCA_001062345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/345/GCA_001062345.1_ASM106234v1	26230489	1223_PMEN
Vibrio sp. J2-1	1507970	PRJEB5886	284692	Proteobacteria	Gammaproteobacteria	5.35368	44.5	-	CCJZ01	69	4704	4588	5/20/15	4/10/17	Contig	STATION BIOLOGIQUE DE ROSCOFF	SAMEA2593984	GCA_001048595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/595/GCA_001048595.1_VRSK1v1_PRJEB5886	-	J2-1
Staphylococcus saprophyticus	29385	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.59416	33	-	LMZM01	27	2551	2391	9/28/16	4/5/17	Scaffold	Tufts University	SAMN04244245	GCA_001747465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/465/GCA_001747465.1_ASM174746v1	-	3201
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.18514	36.7	-	LPSA01	18	2311	2147	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305161	GCA_001560435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/435/GCA_001560435.1_NG05B_C06_04	-	NG05B_C06_04
Bifidobacterium breve	1685	PRJDB4597	325619	Terrabacteria group	Actinobacteria	2.33547	58.8	-	BCXR01	52	2046	1848	6/10/16	4/5/17	Contig	Yakult Central Institute	SAMD00047602	GCA_001685825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/825/GCA_001685825.1_ASM168582v1	27340092	BR-20
Mycobacterium abscessus subsp. massiliense CCUG 48898 = JCM 15300	1001714	PRJNA73693	73693	Terrabacteria group	Actinobacteria	4.96979	64.1	-	AHAR01	18	4991	4848	12/20/11	3/2/17	Contig	Chungnam National University	SAMN02470910	GCA_000239055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/055/GCA_000239055.2_ASM23905v2	-	CCUG 48898
Moraxella catarrhalis	480	PRJNA297370	297370	Proteobacteria	Gammaproteobacteria	2.10777	43.7	-	LXHB01	148	2002	1805	6/3/16	4/5/17	Contig	Drexel University College of Medicine	SAMN04122868	GCA_001656375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/375/GCA_001656375.1_ASM165637v1	26912404	Z7546
Lactobacillus salivarius	1624	PRJNA321782	321782	Terrabacteria group	Firmicutes	2.36801	32.9	-	LXZE01	240	2406	2172	9/12/17	9/14/17	Contig	Seoul National University	SAMN05003806	GCA_002289815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/815/GCA_002289815.1_ASM228981v1	-	KLW003
Klebsiella oxytoca	571	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.01969	54.8	-	JWEV01	214	5768	5560	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197013	GCA_001053715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/715/GCA_001053715.1_ASM105371v1	26230489	1047_KOXY
Cronobacter sakazakii 680	1208592	PRJEB153	181115	Proteobacteria	Gammaproteobacteria	4.36276	56.8	-	CALG01	201	4358	3571	11/15/12	5/18/17	Contig	LifeTech	SAMEA2272711	GCA_000319615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/615/GCA_000319615.1_ASM31961v1	23166675	680
Enterobacter cloacae UCICRE 11	1329855	PRJNA201996	201996	Proteobacteria	Gammaproteobacteria	4.91429	55.5	-	AYIE01	3	4772	4557	10/30/13	3/24/17	Scaffold	Broad Institute	SAMN02138616	GCA_000492455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/455/GCA_000492455.1_Ente_cloa_UCI_11_V1	-	UCICRE 11
Proteus mirabilis	584	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	4.23884	39.3	-	LNHT01	126	4009	3795	12/9/15	4/4/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158302	GCA_001463025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/025/GCA_001463025.1_ASM146302v1	-	50664164
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.47585	32.7	-	CUCP01	82	2445	2333	3/31/15	3/26/17	Contig	SC	SAMEA1035069	GCA_001228105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/105/GCA_001228105.1_7067_4_30	-	25-59
Propionibacterium acnes HL050PA1	765100	PRJNA49233	49233	Terrabacteria group	Actinobacteria	2.47468	60	-	ADZL01	17	2495	2352	7/29/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189222	GCA_000144265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/265/GCA_000144265.1_ASM14426v1	-	HL050PA1
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.88343	67	-	LPCO01	105	6313	5982	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449406	GCA_001528525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/525/GCA_001528525.1_ASM152852v1	-	AU25004
Burkholderia sp. BT03	1144309	PRJNA83041	83041	Proteobacteria	Betaproteobacteria	10.9184	61.9	-	AKKD02	135	10056	9530	7/27/12	4/9/17	Contig	Oak Ridge National Lab	SAMN00839617	GCA_000281995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/995/GCA_000281995.2_Burkholderia.strBT03_v2.0	-	BT03
Campylobacter coli 2548	887315	PRJNA52767	52767	Proteobacteria	delta/epsilon subdivisions	1.6443	31.3	-	AIML01	162	1734	1632	3/16/12	3/15/17	Contig	Cornell University	SAMN02429054	GCA_000253475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/475/GCA_000253475.2_ASM25347v2	-	2548
Lactobacillus brevis	1580	PRJEB17528	359565	Terrabacteria group	Firmicutes	2.67138	45.6	-	FPCQ01	181	2778	2492	12/31/16	5/31/17	Contig	Microbiology and Fermentation	SAMEA4527923	GCA_900117025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/025/GCA_900117025.1_ASM90011702v1	-	-
Mannheimia haemolytica	75985	PRJNA181191	181191	Proteobacteria	Gammaproteobacteria	2.50149	41.1	-	LFYC01	111	2537	2356	3/23/16	4/5/17	Contig	Agriculture and Agri-Food Canada	SAMN03840631	GCA_001596675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/675/GCA_001596675.1_ASM159667v1	26926339	587A
Lactobacillus amylolyticus	83683	PRJNA376039	376039	Terrabacteria group	Firmicutes	1.63604	38.2911	chromosome:NZ_CP020457.1/CP020457.1; plasmid pL6-1:NZ_CP020458.1/CP020458.1	-	2	1676	1461	3/30/17	4/3/17	Complete Genome	South China University of Technology	SAMN06339751	GCA_002075105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/105/GCA_002075105.1_ASM207510v1	-	L6
Serratia marcescens AB42556419-isolate1	1333586	PRJNA203079	203079	Proteobacteria	Gammaproteobacteria	5.33487	59.2	-	ATOM01	117	5171	4948	7/3/13	3/24/17	Scaffold	The Genome Institute	SAMN02436716	GCA_000418935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/935/GCA_000418935.1_S_marcescensAB42556419-isolate1-1.0	-	AB42556419-isolate1
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.29196	39.6	-	FPIL01	417	1090	987	5/10/17	5/24/17	Scaffold	WTSI	SAMEA893038	GCA_900118725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/725/GCA_900118725.1_4880_2_2	-	POS
Leuconostoc mesenteroides subsp. cremoris	33965	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.62949	38	-	MPEG01	101	1754	1408	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981479	GCA_002092425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/425/GCA_002092425.1_ASM209242v1	28217118	LMGCF17
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.07893	41.6	-	JJPE01	185	3517	3298	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708976	GCA_000979555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/555/GCA_000979555.1_gtlEnvA5udCFS	25756680	3.F.A.2.3
Yersinia enterocolitica subsp. palearctica YE-P4	1329364	PRJNA200683	200683	Proteobacteria	Gammaproteobacteria	4.44978	46.9	-	ASHU01	95	4210	3855	5/28/13	3/24/17	Contig	Max von Pettenkofer-Institut	SAMN02403948	GCA_000401955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/955/GCA_000401955.1_YE-P4_1.0	23846271	YE-P4
Legionella pneumophila	446	PRJNA278111	278111	Proteobacteria	Gammaproteobacteria	3.78558	38.2886	chromosome:NZ_CP011105.1/CP011105.1; plasmid unnamed:NZ_CP011106.1/CP011106.1	-	2	3507	3248	4/5/16	3/28/17	Complete Genome	Robert Koch Institute	SAMN03379010	GCA_001610735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/735/GCA_001610735.1_ASM161073v1	-	L10-023
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.44454	53.6	-	MLBJ01	41	2408	2191	10/13/16	8/3/17	Contig	Institute for Medical Research	SAMN05877646	GCA_001832925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/925/GCA_001832925.1_ASM183292v1	28254972	c123
Sinorhizobium meliloti 4H41	1041151	PRJNA169747	169747	Proteobacteria	Alphaproteobacteria	6.79564	62	-	AQWP01	47	6564	6136	4/20/13	5/19/17	Contig	DOE Joint Genome Institute	SAMN02440409	GCA_000375585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/585/GCA_000375585.1_ASM37558v1	26380038	4H41
Bordetella bronchiseptica MBORD849	1331237	PRJNA202149	202149	Proteobacteria	Betaproteobacteria	5.21617	68.2	-	JGXW01	68	4973	4842	5/12/14	4/2/17	Contig	JCVI	SAMN02231426	GCA_000689935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/935/GCA_000689935.1_gbb41v01	25908122	MBORD849
Pediococcus damnosus	51663	PRJNA290141	290141	Terrabacteria group	Firmicutes	2.20126	38.2783	chromosome:NZ_CP012269.1/CP012269.1; plasmid pL21532-1:NZ_CP012270.1/CP012270.1; plasmid pL21532-2:NZ_CP012271.1/CP012271.1; plasmid pL21532-3:NZ_CP012272.1/CP012272.1; plasmid pL21532-4:NZ_CP012273.1/CP012273.1; plasmid pL21532-5:NZ_CP012274.1/CP012274.1	-	6	2148	1998	4/5/16	4/5/17	Complete Genome	Technische Universitaet Muenchen	SAMN03876481	GCA_001611035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/035/GCA_001611035.1_ASM161103v1	27028007	TMW 2.1532
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31229	57.2358	chromosome 1:NZ_CP018488.1/CP018488.1; chromosome 2:NZ_CP018489.1/CP018489.1	-	2	3371	3145	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932931	GCA_002191315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/315/GCA_002191315.1_ASM219131v1	28388689	BwIM_IRQ_11
Lactobacillus rhamnosus K32	1300223	PRJNA191611	191611	Terrabacteria group	Firmicutes	3.01692	46.7	-	JNNV01	24	3029	2773	7/28/14	4/2/17	Contig	Vavilov Institute of General Genetics	SAMN02840977	GCA_000735255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/255/GCA_000735255.1_ASM73525v1	-	K32
Pasteurella multocida 93002	1298926	PRJNA191137	191137	Proteobacteria	Gammaproteobacteria	2.19591	40.4	-	ARNX01	317	2062	1934	6/18/13	4/2/17	Contig	Moredun Research Institute	SAMN02470556	GCA_000478235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/235/GCA_000478235.1_ASM47823v1	-	93002
[Haemophilus] parasuis	738	PRJNA301181	301181	Proteobacteria	Gammaproteobacteria	2.4602	39.6	-	MNAW01	128	2379	2153	1/6/17	4/6/17	Scaffold	Chinese Academy of Agricultural Sciences	SAMN04230866	GCA_001938325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/325/GCA_001938325.1_ASM193832v1	-	H38
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12774	41.2	-	CWFB01	82	2046	1874	6/23/15	3/26/17	Contig	SC	SAMEA1032772	GCA_001175385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/385/GCA_001175385.1_6903_8_67	-	EQUI0212
Bifidobacterium bifidum	1681	PRJNA272371	272371	Terrabacteria group	Actinobacteria	2.13194	63	-	LSUI01	72	1838	1695	2/29/16	2/29/16	Contig	National University of Singapore	SAMN04497916	GCA_001576895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/895/GCA_001576895.1_ASM157689v1	-	-
Stenotrophomonas maltophilia	40324	PRJNA272355	272355	Proteobacteria	Gammaproteobacteria	4.0654	66.3	-	JXIP01	145	3659	3536	2/9/15	3/25/17	Contig	University of Malaya	SAMN03280975	GCA_000834105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/105/GCA_000834105.1_ASM83410v1	26659682	ZBG7B
Bacillus amyloliquefaciens	1390	PRJNA268171	268171	Terrabacteria group	Firmicutes	3.96166	45.7	-	JTJG01	40	4065	3837	12/8/14	4/2/17	Contig	Universidad del Papaloapan	SAMN03216563	GCA_000798615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/615/GCA_000798615.1_ASM79861v1	25676753	JJC33M
Bifidobacterium animalis subsp. lactis ATCC 27674	1365954	PRJNA215968	215968	Terrabacteria group	Actinobacteria	1.91238	60.5	-	AWFM01	18	1637	1569	8/11/15	4/3/17	Scaffold	"Food Science and Technology Institute, Morinaga Milk Industry Co., Ltd"	SAMN03978808	GCA_001263985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/985/GCA_001263985.1_ASM126398v1	26236711	ATCC 27674
Chlamydia psittaci 03DC35	1112264	PRJNA77101	77101	PVC group	Chlamydiae	1.19364	39.1	-	ATLE01	13	1072	999	6/25/13	4/1/17	Scaffold	University of Maryland School of Medicine	SAMN01821293	GCA_000415825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/825/GCA_000415825.1_ASM41582v1	-	03DC35
Enterococcus faecium TX0133a04	749523	PRJNA47199	47199	Terrabacteria group	Firmicutes	2.92265	37.7	-	AEBC01	190	3031	2878	8/27/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189137	GCA_000147235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/235/GCA_000147235.1_ASM14723v1	-	TX0133a04
Neisseria gonorrhoeae FA19	528352	PRJNA32793	32793	Proteobacteria	Betaproteobacteria	2.21803	52.4	-	AKCG01	11	2620	2279	6/15/12	4/11/17	Contig	Broad Institute	SAMN02595242	GCA_000273665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/665/GCA_000273665.1_PB_Neis_gono_FA19_V1	22829535	FA19
Streptococcus mutans TCI-176	1074143	PRJNA72033	72033	Terrabacteria group	Firmicutes	1.79475	37	-	AGLC01	128	1820	1718	10/6/11	3/22/17	Contig	JCVI	SAMN02436514	GCA_000229225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/225/GCA_000229225.2_SMUT5-NEX_12-176	-	TCI-176
Borrelia garinii IPT136	1408855	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.05469	28.3	-	AYBE01	572	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378822	GCA_000501255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/255/GCA_000501255.1_BorGarIPT136	-	IPT136
Enterococcus faecalis TX0017	749497	PRJNA47147	47147	Terrabacteria group	Firmicutes	2.99707	37.4	-	AEBP01	69	3079	2931	8/31/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189104	GCA_000147905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/905/GCA_000147905.1_ASM14790v1	-	TX0017
Brucella suis F9/06-1	1169244	PRJNA173538	173538	Proteobacteria	Alphaproteobacteria	3.32176	57.2	-	AQLI01	20	3388	3161	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN00839735	GCA_000371325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/325/GCA_000371325.1_Bruc_suis_F9_06-1_V1	-	F9/06-1
Rhizobium leguminosarum bv. viciae Ps8	1079454	PRJNA169711	169711	Proteobacteria	Alphaproteobacteria	7.55298	60.8	-	AQWI01	69	7443	7029	4/20/13	5/19/17	Contig	DOE Joint Genome Institute	SAMN02441058	GCA_000375705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/705/GCA_000375705.1_ASM37570v1	-	Ps8
Treponema pallidum subsp. pallidum	161	PRJNA322283	322283	Spirochaetes	Spirochaetia	1.13916	52.8	chromosome:NZ_CP016057.1/CP016057.1	-	1	1066	1003	8/25/16	4/5/17	Chromosome	"National Institute of Health, Portugal"	SAMN05150624	GCA_001713095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/095/GCA_001713095.1_ASM171309v1	-	PT_SIF1142
Borrelia burgdorferi IPT141	1408882	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.20444	28.2	-	AYCF01	72	1248	946	12/3/13	4/2/17	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378849	GCA_000502155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/155/GCA_000502155.1_BorBurgIPT141	-	IPT141
Burkholderia multivorans	87883	PRJEB12785	382510	Proteobacteria	Betaproteobacteria	6.22343	67.3	-	FKJU01	3	5910	5655	4/11/17	7/9/17	Contig	LM-UGent	SAMEA3876906	GCA_900079465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/465/GCA_900079465.1_ASM90007946v1	-	-
Clostridium botulinum	1491	PRJNA290143	290143	Terrabacteria group	Firmicutes	3.00517	27.9	-	LGVU01	111	2884	2752	8/11/15	3/26/17	Scaffold	Anses	SAMN03876597	GCA_001264475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/475/GCA_001264475.1_ASM126447v1	26430029	43243-CD
Vibrio fischeri JRM200	1367488	PRJNA212807	212807	Proteobacteria	Gammaproteobacteria	3.59093	39.1	-	AUUX01	3663	-	-	6/8/17	6/8/17	Contig	University of New Mexico	SAMN06226649	GCA_002179675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/675/GCA_002179675.1_ASM217967v1	-	JRM200
Porphyromonas gingivalis	837	PRJEB10280	362716	FCB group	Bacteroidetes/Chlorobi group	2.30412	48.4	-	FUFE01	89	2063	1889	2/2/17	4/6/17	Scaffold	"Melbourne Dental School, University of Melbourne"	SAMEA3505344	GCA_900157295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/295/GCA_900157295.1_11A	-	11A
Bacillus megaterium Q3	1452722	PRJNA236009	236009	Terrabacteria group	Firmicutes	5.2298	38.2723	chromosome:NZ_CP010586.1/CP010586.1; plasmid p1:NZ_CP010587.1/CP010587.1	-	2	5383	5134	7/9/15	4/3/17	Complete Genome	Hunan Agricultural University	SAMN03799770	GCA_001050455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/455/GCA_001050455.1_ASM105045v1	-	Q3
Vibrio harveyi	669	PRJNA340970	340970	Proteobacteria	Gammaproteobacteria	5.83575	44.9	-	MSFV01	68	5455	5214	4/21/17	4/24/17	Contig	hainan academy of ocean and fisheries sciences	SAMN06169720	GCA_002105235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/235/GCA_002105235.1_ASM210523v1	-	LG353
Salinispora arenicola CNH646	1136427	PRJNA169832	169832	Terrabacteria group	Actinobacteria	5.40049	69.6	-	AZWH01	58	4897	4571	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597238	GCA_000514635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/635/GCA_000514635.1_ASM51463v1	-	CNH646
Lactobacillus casei	1582	PRJNA305625	305625	Terrabacteria group	Firmicutes	3.02619	47.8	-	LOJN01	238	2976	2712	1/9/17	4/6/17	Contig	CORPOICA	SAMN04330102	GCA_001940585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/585/GCA_001940585.1_Lactobacillus_BGA56	-	B900021
Coxiella burnetii CbuK_Q154	434924	PRJEB7092	262155	Proteobacteria	Gammaproteobacteria	2.00642	42.6	-	CCXO01	3	2203	1912	9/27/14	4/2/17	Contig	URMITE	SAMEA2777685	GCA_000820465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/465/GCA_000820465.1_Coxiella_burnetii	25428964	Cb196_Saudi_Arabia
Legionella pneumophila	446	PRJEB13594	326235	Proteobacteria	Gammaproteobacteria	3.39144	38.2694	chromosome 1:NZ_LT598657.1/LT598657.1; plasmid 2:NZ_LT598658.1/LT598658.1	-	2	3076	2940	7/9/16	3/28/17	Complete Genome	UNIVERSITY OF MELBOURNE	SAMEA4067783	GCA_900092465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/465/GCA_900092465.1_Lpm7613_v1	-	Lpm7613
Vibrio parahaemolyticus Peru-288	1238207	PRJNA176642	176642	Proteobacteria	Gammaproteobacteria	5.18309	45.3	-	JAII01	110	4965	4802	1/23/14	3/18/17	Scaffold	IGS	SAMN01923801	GCA_000522065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/065/GCA_000522065.2_vpPeru288	-	Peru-288
Aeromonas salmonicida subsp. salmonicida	29491	PRJNA264317	264317	Proteobacteria	Gammaproteobacteria	4.77614	58.4	-	MIIS01	117	4582	4100	12/13/16	4/6/17	Contig	Universite Laval	SAMN05728470	GCA_001902065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/065/GCA_001902065.1_ASM190206v1	-	JF2506
Streptococcus mitis	28037	PRJNA274768	274768	Terrabacteria group	Firmicutes	1.9844	40.2	-	JYGQ01	7	2011	1850	3/23/15	4/3/17	Contig	University at Buffalo	SAMN03334900	GCA_000960025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/025/GCA_000960025.1_ASM96002v1	25999552	SK137
Oenococcus oeni IOEB_B16	1428422	PRJNA229547	229547	Terrabacteria group	Firmicutes	1.7934	38	-	AZKC01	45	1843	1577	10/1/14	4/11/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02902406	GCA_000761765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/765/GCA_000761765.1_Oeoe_IOEB_B16_1.0	24901216	IOEB_B16
Xanthomonas oryzae	347	PRJNA257008	257008	Proteobacteria	Gammaproteobacteria	4.69324	64	-	LHUH01	457	4395	3536	8/31/15	4/11/17	Contig	µFORGE	SAMN03862119	GCA_001277055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/055/GCA_001277055.1_XANT004-SEQ-2-ASM-1	-	CIX44
Campylobacter fetus subsp. testudinum	1507806	PRJNA285182	285182	Proteobacteria	delta/epsilon subdivisions	1.74277	33.1	-	LFXF01	52	1750	1675	8/5/16	4/5/17	Contig	Utrecht University	SAMN03741942	GCA_001699415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/415/GCA_001699415.1_ASM169941v1	27333878	D6659
Pediococcus damnosus	51663	PRJNA290141	290141	Terrabacteria group	Firmicutes	2.2811	38.2484	chromosome:NZ_CP012283.1/CP012283.1; plasmid pL21534-1:NZ_CP012284.1/CP012284.1; plasmid pL21534-2:NZ_CP012285.1/CP012285.1; plasmid pL21534-3:NZ_CP012286.1/CP012286.1; plasmid pL21534-4:NZ_CP012287.1/CP012287.1	-	5	2229	2070	4/5/16	4/5/17	Complete Genome	Technische Universitaet Muenchen	SAMN03876483	GCA_001611115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/115/GCA_001611115.1_ASM161111v1	27028007	TMW 2.1534
Leptospira borgpetersenii	174	PRJNA257146	257146	Spirochaetes	Spirochaetia	3.90082	40	-	JQRY01	229	3767	3417	2/24/16	4/5/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947776	GCA_001569465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/465/GCA_001569465.1_ASM156946v1	26833181	56604
Lactobacillus delbrueckii subsp. bulgaricus CNCM I-1632	1042399	PRJNA67859	67859	Terrabacteria group	Firmicutes	1.7679	49.9	-	AGFO01	69	1838	1603	10/28/11	3/30/17	Contig	"Washington University School of Medicine,  Center for Genome Sciences and Systems Biology"	SAMN02436800	GCA_000284695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/695/GCA_000284695.1_ASM28469v1	22030749	CNCM I-1632
Yersinia pseudotuberculosis	633	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.42894	47.5	-	CPUY01	55	4097	3779	3/23/15	4/3/17	Scaffold	SC	SAMEA859889	GCA_001110725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/725/GCA_001110725.1_5139_3_3	-	IP32544
Brucella abortus	235	PRJNA400357	400357	Proteobacteria	Alphaproteobacteria	3.30655	57.1709	chromosome 1:NZ_CP023241.1/CP023241.1; chromosome 2:NZ_CP023242.1/CP023242.1	-	2	3396	3006	9/12/17	9/14/17	Chromosome	IZSM-Portici	SAMN07572696	GCA_002291345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/345/GCA_002291345.1_ASM229134v1	-	84573
Enterococcus faecium	1352	PRJNA299371	299371	Terrabacteria group	Firmicutes	2.75335	38.2372	chromosome:NZ_CP013009.1/CP013009.1; plasmid pWCF-TC1:NZ_CP013010.1/CP013010.1	-	2	2821	2626	10/26/15	3/27/17	Complete Genome	Robert Koch Institute	SAMN04201208	GCA_001412695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/695/GCA_001412695.1_ASM141269v1	26902259	UW7606x64/3 TC1
Streptococcus salivarius	1304	PRJNA320256	320256	Terrabacteria group	Firmicutes	2.29554	39.5	-	LXIM01	53	2141	2031	12/16/16	4/6/17	Contig	State University of Campinas	SAMN04934527	GCA_001907055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/055/GCA_001907055.1_ASM190705v1	-	40-02 S18
Shigella boydii	621	PRJNA288170	288170	Proteobacteria	Gammaproteobacteria	4.34523	50.7	-	LPTL01	441	4961	4125	12/15/16	2/26/17	Contig	"University of Maryland, School of Medicine"	SAMN04001695	GCA_001906205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/205/GCA_001906205.1_ASM190620v1	-	601294
Clostridioides difficile E28	1215080	PRJEB210	222738	Terrabacteria group	Firmicutes	3.98387	28.5	-	CAMX01	274	3686	3561	10/14/13	3/16/17	Scaffold	LPBA	SAMEA3138888	GCA_000530595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/595/GCA_000530595.1_E28	24482682	E28
Vibrio cholerae O1 biovar El Tor	686	PRJNA268882	268882	Proteobacteria	Gammaproteobacteria	4.03497	47.6342	chromosome I:NZ_CM003111.1/CM003111.1; chromosome II:NZ_CM003112.1/CM003112.1	JWIK01	2	3691	3348	1/15/15	3/25/17	Chromosome	Irkutsk Antiplague Research Institute of Rospotrebnadzor	SAMN03234995	GCA_000818865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/865/GCA_000818865.1_ASM81886v1	-	I-1471
Candidatus Pelagibacter ubique	198252	PRJEB9287	287342	Proteobacteria	Alphaproteobacteria	0.294337	30.5	-	CVSJ01	62	-	-	6/17/15	6/17/15	Contig	UNIVERSITY OF CALIFORNIA - SAN DIEGO	SAMEA3368561	GCA_001180005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/005/GCA_001180005.1_CLC_assembled_contigs	-	SCGC AAA795-G15
Ralstonia solanacearum	305	PRJEB8309	279369	Proteobacteria	Betaproteobacteria	5.8126	66.1	-	CDRW01	1	5483	4678	3/24/15	4/4/17	Scaffold	CIRAD	SAMEA3218684	GCA_001373275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/275/GCA_001373275.1_IBSBF1900.fas.gz	-	IBSBF1900
Lactobacillus hokkaidonensis JCM 18461	1291742	PRJDB1726	266931	Terrabacteria group	Firmicutes	2.40059	38.2004	chromosome:NZ_AP014680.1/AP014680.1; plasmid pLOOC260-1:NZ_AP014681.1/AP014681.1; plasmid pLOOC260-2:NZ_AP014682.1/AP014682.1	-	3	2369	2241	11/11/14	4/10/17	Complete Genome	"National Agriculture and Food Research Organization, National Institute of Livestock and Grassland Science"	SAMD00000344	GCA_000829395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/395/GCA_000829395.1_ASM82939v1	25879859	LOOC260
Burkholderia mallei JHU	334803	PRJNA13988	13988	Proteobacteria	Betaproteobacteria	5.89399	67.8	-	AAIR02	10	6136	5638	7/5/05	5/18/17	Scaffold	TIGR	SAMN02435849	GCA_000152405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/405/GCA_000152405.1_ASM15240v1	-	JHU
Corynebacterium glutamicum	1718	PRJNA305709	305709	Terrabacteria group	Actinobacteria	3.17384	54.3	-	LOQY01	117	2966	2796	12/21/16	5/1/17	Contig	Shanghai Institutes for Biological Sciences (SIBS) of Chinese Academy of Sciences (CAS)	SAMN04331743	GCA_001912785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/785/GCA_001912785.1_ASM191278v1	28198668	617
Bacillus pumilus	1408	PRJNA301919	301919	Terrabacteria group	Firmicutes	3.66991	41.5	-	LNCN01	20	3759	3593	11/17/15	4/4/17	Contig	Bundeswehr Insitute of Microbiology	SAMN04260432	GCA_001444515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/515/GCA_001444515.1_ASM144451v1	26868410	Bonn
Capnocytophaga sp. ChDC OS43	209053	PRJNA386716	386716	FCB group	Bacteroidetes/Chlorobi group	3.41269	38.2	chromosome:NZ_CP022022.1/CP022022.1	-	1	3138	2983	6/27/17	6/29/17	Complete Genome	Chosun University	SAMN07125685	GCA_002209445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/445/GCA_002209445.1_ASM220944v1	-	ChDC OS43
[Haemophilus] ducreyi	730	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	1.70131	38.2	chromosome:NZ_CP022037.1/CP022037.1	-	1	1686	1519	6/27/17	6/29/17	Complete Genome	US Food and Drug Administration 	SAMN06173310	GCA_002208665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/665/GCA_002208665.1_ASM220866v1	-	FDAARGOS_297
Burkholderia cenocepacia	95486	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.70661	67.3	-	LPJW01	111	7261	6985	1/22/16	3/27/17	Contig	Northern Arizona University	SAMN03449601	GCA_001533105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/105/GCA_001533105.1_ASM153310v1	-	MSMB383WGS
Lactobacillus reuteri	1598	PRJNA342243	342243	Terrabacteria group	Firmicutes	1.98639	38.8	-	MIMR01	228	1948	1788	5/11/17	5/22/17	Contig	Seoul National University	SAMN05751492	GCA_002128615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/615/GCA_002128615.1_ASM212861v1	-	KLR3002
Streptococcus thermophilus	1308	PRJNA335822	335822	Terrabacteria group	Firmicutes	1.77367	39	-	MCHV01	61	1921	1638	11/7/16	4/11/17	Contig	Universita Cattolica del Sacro Cuore	SAMN05463221	GCA_001867185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/185/GCA_001867185.1_ASM186718v1	-	UC8547del3
Bacteroides fragilis str. 3988T(B)14	1339315	PRJNA206158	206158	FCB group	Bacteroidetes/Chlorobi group	5.19046	43.4	-	JGCY01	408	4772	4315	3/20/14	4/18/17	Contig	IGS	SAMN02314558	GCA_000598365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/365/GCA_000598365.1_ASM59836v1	-	3988T(B)14
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.71935	50.7	-	CXIF01	384	5248	4547	7/16/15	2/24/17	Contig	SC	SAMEA2004846	GCA_001250915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/915/GCA_001250915.1_8289_7_65	-	83011
Bacillus krulwichiae	199441	PRJNA373882	373882	Terrabacteria group	Firmicutes	4.61086	38.2	chromosome:NZ_CP020814.1/CP020814.1	-	1	4672	4214	4/25/17	4/27/17	Complete Genome	Drexel University	SAMN06317781	GCA_002109385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/385/GCA_002109385.1_ASM210938v1	-	AM31D
Bacillus licheniformis	1402	PRJNA316783	316783	Terrabacteria group	Firmicutes	4.44119	45.6	-	LWKF01	209	4729	4455	11/10/16	4/5/17	Contig	CSIR-Institute of Microbial Technology	SAMN04590053	GCA_001876655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/655/GCA_001876655.1_ASM187665v1	-	RE1.61
Vibrio vulnificus	672	PRJNA276162	276162	Proteobacteria	Gammaproteobacteria	4.97126	46.6	-	JZEP01	118	4627	4439	3/23/15	4/3/17	Contig	Hankuk University of Foreign Studies	SAMN03371457	GCA_000959765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/765/GCA_000959765.1_ASM95976v1	-	SC9740
Pseudomonas syringae pv. atrofaciens	192087	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	6.01225	59	-	LJPO01	248	5416	5057	10/20/15	3/27/17	Scaffold	University of Toronto	SAMN03976252	GCA_001400125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/125/GCA_001400125.1_PafICMP4394	-	ICMP4394
Streptococcus suis YS56	1214209	PRJNA171472	171472	Terrabacteria group	Firmicutes	2.23011	41.2	-	ALMY01	87	2251	2086	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469542	GCA_000440115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/115/GCA_000440115.1_version1	-	YS56
Gramella sp. LPB0144	1913577	PRJNA350755	350755	FCB group	Bacteroidetes/Chlorobi group	2.97889	38.2	chromosome:NZ_CP018153.1/CP018153.1	-	1	2723	2612	12/5/16	4/14/17	Complete Genome	Korea University	SAMN05945920	GCA_001889005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/005/GCA_001889005.1_ASM188900v1	-	LPB0144
Dokdonia donghaensis DSW-1	1300343	PRJNA191952	191952	FCB group	Bacteroidetes/Chlorobi group	3.29394	38.2	chromosome:NZ_CP015125.1/CP015125.1	-	1	2953	2843	6/1/16	4/12/17	Complete Genome	Yonsei University	SAMN04572126	GCA_001653755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/755/GCA_001653755.1_ASM165375v1	-	DSW-1
[Haemophilus] ducreyi	730	PRJNA318024	318024	Proteobacteria	Gammaproteobacteria	1.73854	38.2	chromosome:NZ_CP015431.1/CP015431.1	-	1	1722	1554	5/19/16	4/5/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04632446	GCA_001647855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/855/GCA_001647855.1_ASM164785v1	-	GHA3
Bifidobacterium longum subsp. longum	1679	PRJNA239849	239849	Terrabacteria group	Actinobacteria	2.3847	60.3	-	JGYZ01	8	2090	1852	8/18/14	4/2/17	Contig	University of Parma	SAMN02673437	GCA_000741245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/245/GCA_000741245.1_Biflon_sub.lon	"2,508,549,325,107,960"	LMG 13197
Fusobacterium nucleatum subsp. fusiforme ATCC 51190	1196653	PRJNA167963	167963	Fusobacteria	Fusobacteriia	1.83711	27.2	-	AKXI01	198	1859	1627	7/16/12	3/30/17	Contig	Chosun University	SAMN02469584	GCA_000279975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/975/GCA_000279975.1_ASM27997v1	22965077	ATCC 51190
Agrobacterium tumefaciens	358	PRJNA360555	360555	Proteobacteria	Alphaproteobacteria	5.93927	58.4	-	MTKI01	117	5709	5462	1/30/17	4/6/17	Scaffold	McMaster University	SAMN06212346	GCA_001975795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/795/GCA_001975795.1_ASM197579v1	-	ATCC 31700
Shigella flexneri S6678	1212568	PRJNA171075	171075	Proteobacteria	Gammaproteobacteria	4.79816	50.7	-	AMJV01	247	5277	4370	1/6/15	8/4/17	Contig	Institute for Genome Sciences	SAMN03276483	GCA_000815595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/595/GCA_000815595.1_ASM81559v1	-	S6678
[Haemophilus] ducreyi	730	PRJNA318024	318024	Proteobacteria	Gammaproteobacteria	1.73856	38.2	chromosome:NZ_CP015432.1/CP015432.1	-	1	1728	1553	5/19/16	4/5/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04632447	GCA_001647875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/875/GCA_001647875.1_ASM164787v1	-	GHA5
Pseudomonas putida MTCC 5279	1240350	PRJNA176888	176888	Proteobacteria	Gammaproteobacteria	5.21579	62.5	-	AMZE01	171	4867	4579	6/14/13	4/1/17	Contig	CSIR-National Botanical Research Institute	SAMN01840335	GCA_000411615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/615/GCA_000411615.1_Pput2.5	23908291	MTCC5279
Xylella fastidiosa	2371	PRJNA257008	257008	Proteobacteria	Gammaproteobacteria	2.53847	51.8424	plasmid pXF-P1.OLS0479:NZ_CM003762.1/CM003762.1; plasmid pXF-P4.OLS0479:NZ_CM003763.1/CM003763.1; plasmid pXF-PS.OLS0479:NZ_CM003764.1/CM003764.1; plasmid pXF-RC.OLS0479:NZ_CM003765.1/CM003765.1	LRVJ01	172	2454	2150	2/5/16	4/4/17	Contig	µFORGE	SAMN03862125	GCA_001549825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/825/GCA_001549825.1_XFAS006-SEQ-1-ASM-1	-	COF0407
Leptospira interrogans serovar Medanensis str. L0448	1049920	PRJNA74083	74083	Spirochaetes	Spirochaetia	4.9502	35.1	-	AHNA02	81	4597	4096	1/24/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436373	GCA_000243955.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/955/GCA_000243955.3_LintL0448v0.2	-	L0448
[Haemophilus] ducreyi	730	PRJNA318024	318024	Proteobacteria	Gammaproteobacteria	1.76992	38.2	chromosome:NZ_CP015433.1/CP015433.1	-	1	1763	1587	5/19/16	4/5/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04632448	GCA_001647895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/895/GCA_001647895.1_ASM164789v1	-	GHA8
[Haemophilus] ducreyi	730	PRJNA318024	318024	Proteobacteria	Gammaproteobacteria	1.7755	38.2	chromosome:NZ_CP015434.1/CP015434.1	-	1	1773	1593	5/19/16	4/5/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04632449	GCA_001647915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/915/GCA_001647915.1_ASM164791v1	-	GHA9
Legionella pneumophila subsp. pascullei	91890	PRJNA310003	310003	Proteobacteria	Gammaproteobacteria	3.45892	38.2	chromosome:NZ_CP014256.1/CP014256.1	-	1	3142	3002	3/14/16	3/28/17	Complete Genome	Centers of Disease Control	SAMN04438278	GCA_001590645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/590/645/GCA_001590645.1_ASM159064v1	27151801	D-7158
Bartonella bacilliformis	774	PRJNA231221	231221	Proteobacteria	Alphaproteobacteria	1.4434	38.2	chromosome:NZ_CP014012.1/CP014012.1	-	1	1284	1183	2/11/16	4/4/17	Complete Genome	US Food and Drug Administration 	SAMN03996253	GCA_001559035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/035/GCA_001559035.1_ASM155903v1	-	ATCC:35685D-5
Listeria monocytogenes	1639	PRJNA302838	302838	Terrabacteria group	Firmicutes	2.83987	38.2	chromosome:NZ_CP013286.1/CP013286.1	-	1	2858	2749	12/1/15	3/1/17	Complete Genome	ETH Zurich	SAMN04286629	GCA_001454865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/865/GCA_001454865.1_ASM145486v1	27034489	WSLC 1019
Enterococcus faecium	1352	PRJNA293793	293793	Terrabacteria group	Firmicutes	2.57233	38.2	chromosome:NZ_CP012522.1/CP012522.1	-	1	2631	2441	9/24/15	3/26/17	Complete Genome	Robert Koch Institute	SAMN04009964	GCA_001298485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/485/GCA_001298485.1_ASM129848v1	26586871	64/3
Haemophilus influenzae	727	PRJNA272685	272685	Proteobacteria	Gammaproteobacteria	1.8384	38	-	JXMC01	24	1854	1703	2/9/15	3/25/17	Contig	Novartis Vaccines	SAMN03284976	GCA_000833765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/765/GCA_000833765.1_ASM83376v1	25814593	Hi381
Prochlorococcus marinus	1219	PRJEB9287	287342	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.38877	31.1	-	CVSW01	120	1525	1453	6/17/15	4/11/17	Contig	UNIVERSITY OF CALIFORNIA - SAN DIEGO	SAMEA3368574	GCA_001180265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/265/GCA_001180265.1_CLC_assembled_contigs	-	SCGC AAA795-I06
Mycobacterium bovis	1765	PRJNA214551	214551	Terrabacteria group	Actinobacteria	4.30814	65.5	-	JPFR01	89	4268	4023	7/15/14	4/2/17	Contig	South American Mycobacterium bovis WGS	SAMN02899232	GCA_000729765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/765/GCA_000729765.1_ASM72976v1	-	05-566
Mycobacterium avium subsp. paratuberculosis 1281	1078001	PRJNA72211	72211	Terrabacteria group	Actinobacteria	4.75509	69.3	-	AGAK01	1030	4845	3988	12/29/11	5/19/17	Contig	University of Wisconsin- Madison	SAMN02472017	GCA_000240385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/385/GCA_000240385.2_ASM24038v2	22163226	1281
Clostridium perfringens	1502	PRJNA327405	327405	Terrabacteria group	Firmicutes	3.60115	28	-	MARJ01	114	3332	3146	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323885	GCA_001949325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/325/GCA_001949325.1_ASM194932v1	28062388	JFP796
Xanthomonas campestris	339	PRJNA270636	270636	Proteobacteria	Gammaproteobacteria	5.06313	65.3	-	JXQP01	47	4478	4182	2/9/15	4/3/17	Contig	University of Chicago	SAMN03267868	GCA_000834675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/675/GCA_000834675.1_ASM83467v1	-	LMCP11
Bartonella henselae	38323	PRJEB5996	242929	Proteobacteria	Alphaproteobacteria	1.90538	38.2	chromosome I:NZ_LN879429.1/LN879429.1	-	1	1706	1505	9/11/15	4/10/17	Complete Genome	URMITE	SAMEA3511177	GCA_001291465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/465/GCA_001291465.1_Bartonella_henselae_MVT02	-	MVT02
Coxiella-like endosymbiont	1592897	PRJNA279339	279339	Proteobacteria	Gammaproteobacteria	1.73384	38.2	chromosome:NZ_CP011126.1/CP011126.1	-	1	1747	1309	7/14/15	4/10/17	Complete Genome	Uppsala University	SAMN03445847	GCA_001077715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/715/GCA_001077715.1_ASM107771v1	26025560	CRt
Staphylococcus epidermidis VCU125	904341	PRJNA53765	53765	Terrabacteria group	Firmicutes	2.43634	32	-	AHLF01	70	2415	2285	2/7/12	3/23/17	Contig	J. Craig Venter Institute	SAMN00116836	GCA_000247125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/125/GCA_000247125.2_ASM24712v2	-	VCU125
Streptococcus pyogenes	1314	PRJNA278400	278400	Terrabacteria group	Firmicutes	1.95045	38.2	chromosome:NZ_CP011068.1/CP011068.1	-	1	1991	1854	6/9/15	3/26/17	Complete Genome	Universite de Rennes 1	SAMN03418291	GCA_001023495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/495/GCA_001023495.1_ASM102349v1	26184948	STAB10015
Haemophilus influenzae	727	PRJEB6403	251923	Proteobacteria	Gammaproteobacteria	1.89064	38.2	chromosome 1:NZ_LN831035.1/LN831035.1	-	1	1901	1761	3/22/15	3/27/17	Complete Genome	SC	SAMEA2498480	GCA_001457655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/655/GCA_001457655.1_NCTC8143	-	NCTC8143
Pseudomonas fluorescens	294	PRJNA264019	264019	Proteobacteria	Gammaproteobacteria	6.42011	59	-	JSAK01	64	5913	5721	12/17/14	4/2/17	Scaffold	University of Copenhagen	SAMN03112824	GCA_000802965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/965/GCA_000802965.1_ASM80296v1	-	C2
Haemophilus influenzae	727	PRJNA235929	235929	Proteobacteria	Gammaproteobacteria	1.84626	38.2	chromosome:NZ_CP007470.1/CP007470.1	-	1	1842	1702	2/23/15	3/25/17	Complete Genome	Griffith University	SAMN02595602	GCA_000931575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/575/GCA_000931575.1_ASM93157v1	-	477
Haemophilus influenzae	727	PRJNA235929	235929	Proteobacteria	Gammaproteobacteria	1.8465	38.2	chromosome:NZ_CP007471.1/CP007471.1	-	1	1819	1681	2/23/15	3/25/17	Complete Genome	Griffith University	SAMN02595604	GCA_000931605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/605/GCA_000931605.1_ASM93160v1	-	C486
Haemophilus influenzae	727	PRJNA235929	235929	Proteobacteria	Gammaproteobacteria	1.88762	38.2	chromosome:NZ_CP007472.1/CP007472.1	-	1	1898	1758	2/23/15	3/25/17	Complete Genome	Griffith University	SAMN02595605	GCA_000931625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/625/GCA_000931625.1_ASM93162v1	-	723
Haemophilus influenzae	727	PRJNA263041	263041	Proteobacteria	Gammaproteobacteria	1.8509	38.2	chromosome:NZ_CP009610.1/CP009610.1	-	1	1843	1710	10/16/14	3/24/17	Complete Genome	Drexel University College of Medicine	SAMN03093440	GCA_000767075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/075/GCA_000767075.1_ASM76707v1	-	Hi375
Dokdonia sp. MED134	313590	PRJNA13544	13544	FCB group	Bacteroidetes/Chlorobi group	3.30255	38.2	chromosome:NZ_CP009301.1/CP009301.1	-	1	2951	2857	9/12/14	4/17/17	Complete Genome	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436136	GCA_000152925.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/925/GCA_000152925.3_ASM15292v3	"172,158,432,200,300,000,000,000"	MED134
Bartonella henselae	38323	PRJEB4971	230328	Proteobacteria	Alphaproteobacteria	1.90538	38.2	chromosome I:NZ_HG965802.1/HG965802.1	-	1	1705	1505	4/1/14	4/10/17	Complete Genome	URMITE	SAMEA3138985	GCA_000612965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/965/GCA_000612965.1_PRJEB4971_assembly_1	-	BM1374163
Pseudomonas fluorescens	294	PRJNA264019	264019	Proteobacteria	Gammaproteobacteria	6.80779	59.1	-	JSAL01	78	6197	6020	12/17/14	4/2/17	Scaffold	University of Copenhagen	SAMN03112832	GCA_000802985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/985/GCA_000802985.1_ASM80298v1	-	H16
Streptococcus constellatus subsp. pharyngis C232	696216	PRJNA42135	42135	Terrabacteria group	Firmicutes	1.93541	38.2	chromosome:NC_022236.1/CP003800.1	-	1	1984	1786	9/3/13	4/1/17	Complete Genome	"National Microbiology Laboratory, Public Health Agency of Canada"	SAMN02603657	GCA_000463395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/395/GCA_000463395.1_ASM46339v1	24341328	C232
Streptococcus anginosus C238	862971	PRJNA50425	50425	Terrabacteria group	Firmicutes	2.23364	38.2	chromosome:NC_022239.1/CP003861.1	-	1	2211	2005	9/3/13	4/1/17	Complete Genome	"National Microbiology Laboratory, Public Health Agency of Canada"	SAMN02603663	GCA_000463505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/505/GCA_000463505.1_ASM46350v1	24341328	C238
Staphylococcus epidermidis VCU126	904342	PRJNA53767	53767	Terrabacteria group	Firmicutes	2.44525	32	-	AHLG01	80	2414	2279	2/7/12	3/23/17	Contig	J. Craig Venter Institute	SAMN00116846	GCA_000247145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/145/GCA_000247145.2_ASM24714v2	-	VCU126
Streptococcus constellatus subsp. pharyngis C818	862968	PRJNA50419	50419	Terrabacteria group	Firmicutes	1.93566	38.2	chromosome:NC_022245.1/CP003840.1	-	1	1983	1783	9/3/13	4/2/17	Complete Genome	"National Microbiology Laboratory, Public Health Agency of Canada"	SAMN02603660	GCA_000463445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/445/GCA_000463445.1_ASM46344v1	24341328	C818
Lactococcus lactis subsp. cremoris IBB477	1449093	PRJNA235170	235170	Terrabacteria group	Firmicutes	2.85035	35.5964	chromosome:NZ_CM007353.1/CM007353.1; plasmid pIBB477a:NZ_CM007354.1/CM007354.1; plasmid pIBB477b:NZ_CM007355.1/CM007355.1; plasmid pIBB477c:NZ_CM007356.1/CM007356.1; plasmid pIBB477d:NZ_CM007357.1/CM007357.1; plasmid pIBB477e:NZ_CM007358.1/CM007358.1	JMMZ01	6	2926	2650	10/3/16	4/5/17	Chromosome	Institute of Biochemistry and Biophysics Polish Academy of Sciences	SAMN02585714	GCA_001856165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/165/GCA_001856165.1_IBB477v1	27687992	IBB477
Xanthomonas campestris	339	PRJNA283309	283309	Proteobacteria	Gammaproteobacteria	5.14069	65.5	-	LHBM01	215	4474	4148	8/11/15	4/4/17	Contig	FDA	SAMN03897571	GCA_001264265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/265/GCA_001264265.1_CFSAN033079	-	CFSAN033079
Clostridium perfringens	1502	PRJNA327398	327398	Terrabacteria group	Firmicutes	3.49531	28	-	MARG01	81	3226	3044	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323882	GCA_001949375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/375/GCA_001949375.1_ASM194937v1	28062388	JFP771
Mycobacterium avium subsp. paratuberculosis JTC 1285	1078002	PRJNA72213	72213	Terrabacteria group	Actinobacteria	4.74516	69.3	-	AGAL01	1115	4836	3988	12/29/11	5/19/17	Contig	University of Wisconsin- Madison	SAMN02472019	GCA_000240405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/405/GCA_000240405.2_ASM24040v2	22163226	JTC 1285
Mycobacterium bovis	1765	PRJNA214551	214551	Terrabacteria group	Actinobacteria	4.33376	65.6	-	JQES01	61	4262	4031	9/8/14	4/2/17	Contig	South American Mycobacterium bovis WGS	SAMN02902641	GCA_000749605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/605/GCA_000749605.1_ASM74960v1	-	49-09
Prochlorococcus marinus	1219	PRJEB9287	287342	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.28294	31.3	-	CVSY01	221	1393	1302	6/17/15	4/3/17	Contig	UNIVERSITY OF CALIFORNIA - SAN DIEGO	SAMEA3368575	GCA_001180285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/285/GCA_001180285.1_CLC_assembled_contigs	-	SCGC AAA795-I15
Haemophilus influenzae	727	PRJNA272685	272685	Proteobacteria	Gammaproteobacteria	1.84357	38	-	JXMA01	21	1851	1707	2/9/15	3/25/17	Contig	Novartis Vaccines	SAMN03284974	GCA_000833815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/815/GCA_000833815.1_ASM83381v1	25814593	Hi361
Legionella pneumophila subsp. pneumophila str. Thunder Bay	1199191	PRJNA168333	168333	Proteobacteria	Gammaproteobacteria	3.45517	38.2	chromosome:CP003730.1	-	1	3043	2998	6/3/13	1/31/14	Complete Genome	Public Health Ontario	SAMN02603729	GCA_000404245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/245/GCA_000404245.1_ASM40424v1	-	Thunder Bay
Legionella pneumophila subsp. pneumophila ATCC 43290	933093	PRJNA78169	78169	Proteobacteria	Gammaproteobacteria	3.359	38.2	chromosome:NC_016811.1/CP003192.1	-	1	3064	2969	12/21/11	3/22/17	Complete Genome	Department of Microbiology - University of Chicago	SAMN02603182	GCA_000239175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/175/GCA_000239175.1_ASM23917v1	22374950	ATCC 43290
Listeria monocytogenes M7	1030009	PRJNA66625	66625	Terrabacteria group	Firmicutes	2.97616	38.2	chromosome:NC_017537.1/CP002816.1	-	1	3081	2952	6/14/11	2/26/17	Complete Genome	Zhejiang University	SAMN02604342	GCA_000218305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/305/GCA_000218305.1_ASM21830v1	21742872	M7
Haemophilus influenzae F3047	935897	PRJEA61001	61001	Proteobacteria	Gammaproteobacteria	2.00702	38.2	chromosome:NC_014922.1/FQ670204.1	-	1	2042	1867	1/10/11	5/28/17	Complete Genome	Wellcome Trust Sanger insititute	SAMEA2272570	GCA_000200475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/200/475/GCA_000200475.1_ASM20047v1	22377449	F3047
Haemophilus influenzae F3031	866630	PRJNA50729	50729	Proteobacteria	Gammaproteobacteria	1.98583	38.2	chromosome:NC_014920.1/FQ670178.1	-	1	2020	1844	12/16/10	5/28/17	Complete Genome	The Wellcome Trust Sanger Institute	SAMEA3138342	GCA_000197875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/197/875/GCA_000197875.1_ASM19787v1	22377449	F3031
Listeria monocytogenes L99	563174	PRJEA31327	31327	Terrabacteria group	Firmicutes	2.9792	38.2	chromosome:NC_017529.1/FM211688.1	-	1	3082	2963	9/22/10	2/26/17	Complete Genome	Justus-Liebig-University Giessen	SAMEA2272406	GCA_000209755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/209/755/GCA_000209755.1_ASM20975v1	23339658	L99
Leptospira interrogans str. L0996	1049932	PRJNA74085	74085	Spirochaetes	Spirochaetia	4.84503	35.2	-	AHNB02	73	4524	3997	1/24/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436425	GCA_000243975.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/975/GCA_000243975.3_LintL0996v0.2	-	L0996
Xylella fastidiosa subsp. fastidiosa	644356	PRJNA311586	311586	Proteobacteria	Gammaproteobacteria	2.5108	51.7	-	LSMJ01	15	2351	2160	2/24/16	4/4/17	Contig	USDA-ARS	SAMN04485942	GCA_001572105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/105/GCA_001572105.1_ASM157210v1	27103713	Stag's Leap
Pseudomonas putida S610	1399145	PRJNA218557	218557	Proteobacteria	Gammaproteobacteria	4.59635	62	-	AYJQ01	69	4119	4010	11/19/13	4/2/17	Contig	Los Alamos National Laboratory	SAMN02470268	GCA_000497385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/385/GCA_000497385.1_EDP1a	24371199	S610
Listeria monocytogenes HCC23	552536	PRJNA29409	29409	Terrabacteria group	Firmicutes	2.97621	38.2	chromosome:NC_011660.1/CP001175.1	-	1	3080	2941	12/12/08	2/26/17	Complete Genome	"College of Veterinary Medicine, Mississippi State University"	SAMN02603154	GCA_000021185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/185/GCA_000021185.1_ASM2118v1	21602330	HCC23
Shigella flexneri S6764	1212569	PRJNA171076	171076	Proteobacteria	Gammaproteobacteria	4.67324	50.9	-	AMJW01	402	5137	4241	1/6/15	8/4/17	Contig	Institute for Genome Sciences	SAMN03276468	GCA_000815625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/625/GCA_000815625.1_ASM81562v1	-	S6764
Agrobacterium tumefaciens	358	PRJNA239301	239301	Proteobacteria	Alphaproteobacteria	5.37676	59	-	JFFS01	68	5267	5172	4/23/14	4/24/14	Scaffold	Shandong University	SAMN02666090	GCA_000648215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/215/GCA_000648215.1_SOAPdenovo_for_version_3_of_the_Agrobacterium_tumefaciens_S33_genome	-	S33
Fusobacterium nucleatum CC53	1297579	PRJNA190102	190102	Fusobacteria	Fusobacteriia	2.06956	27.2	-	AOUL01	379	2039	1833	3/18/13	4/1/17	Contig	BC Cancer Agency	SAMN02469329	GCA_000347315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/315/GCA_000347315.1_SSAKE_FusoCC53	22009989	CC53
Bifidobacterium longum subsp. suis	1695	PRJNA239850	239850	Terrabacteria group	Actinobacteria	2.33583	60	-	JGZA01	36	2102	1823	8/18/14	4/10/17	Contig	University of Parma	SAMN02673438	GCA_000741625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/625/GCA_000741625.1_Biflon_sub.sui	"2,508,549,325,107,960"	LMG 21814
Bartonella bacilliformis KC583	360095	PRJNA16249	16249	Proteobacteria	Alphaproteobacteria	1.44502	38.2	chromosome:NC_008783.1/CP000524.1	-	1	1290	1199	1/4/07	3/30/17	Complete Genome	TIGR	SAMN02604047	GCA_000015445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/445/GCA_000015445.1_ASM1544v1	-	KC583; ATCC 35685
Haemophilus influenzae 86-028NP	281310	PRJNA11752	11752	Proteobacteria	Gammaproteobacteria	1.91449	38.2	chromosome:NC_007146.2/CP000057.2	-	1	1934	1793	6/21/05	3/22/17	Complete Genome	"Columbus Children's Research Institute and The Ohio State University, Pediatrics, USA"	SAMN02603157	GCA_000012185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/185/GCA_000012185.1_ASM1218v1	15968074	86-028NP
Bartonella henselae str. Houston-1	283166	PRJNA196	196	Proteobacteria	Alphaproteobacteria	1.93105	38.2	chromosome:NC_005956.1/BX897699.1	-	1	1743	1520	6/24/04	4/10/17	Complete Genome	Uppsala Univ.	SAMEA3138249	GCA_000046705.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/046/705/GCA_000046705.1_ASM4670v1	15210978	Houston-1
Streptococcus suis YS6	1214212	PRJNA171478	171478	Terrabacteria group	Firmicutes	2.03884	41.1	-	ALNE01	37	2035	1938	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469518	GCA_000440155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/155/GCA_000440155.1_version1	-	YS6
Pseudomonas syringae pv. cerasicola	264451	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.52605	58.4	-	LJQA01	970	5348	4527	10/20/15	3/27/17	Scaffold	University of Toronto	SAMN03976260	GCA_001400215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/215/GCA_001400215.1_PceICMP17524	-	ICMP17524
Vibrio vulnificus	672	PRJNA276162	276162	Proteobacteria	Gammaproteobacteria	4.97372	46.8	-	JZEU01	144	4620	4376	3/23/15	4/3/17	Contig	Hankuk University of Foreign Studies	SAMN03371452	GCA_000959775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/775/GCA_000959775.1_ASM95977v1	-	CG64
Bacillus licheniformis	1402	PRJNA338659	338659	Terrabacteria group	Firmicutes	4.76359	45	-	MEDB01	81	5082	4855	12/9/16	4/6/17	Contig	Tennessee State University	SAMN05560474	GCA_001896285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/285/GCA_001896285.1_ASM189628v1	-	YNP2-TSU
Haemophilus ducreyi 35000HP	233412	PRJNA38	38	Proteobacteria	Gammaproteobacteria	1.69895	38.2	chromosome:NC_002940.2/AE017143.1	-	1	1680	1516	10/24/01	3/29/17	Complete Genome	Univ. Ohio	SAMN02604087	GCA_000007945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/945/GCA_000007945.1_ASM794v1	-	35000HP
Shigella sonnei	624	PRJEB2075	203826	Proteobacteria	Gammaproteobacteria	4.94823	50.4	-	CXMD01	430	5611	4755	7/16/15	2/24/17	Contig	SC	SAMEA1559988	GCA_001251055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/055/GCA_001251055.1_8489_2_84	-	37975463
Bacteroides fragilis str. 3998 T(B) 4	1339285	PRJNA206116	206116	FCB group	Bacteroidetes/Chlorobi group	5.5102	44.1	-	JGDC01	424	5065	4634	3/20/14	4/18/17	Contig	IGS	SAMN02314534	GCA_000598385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/385/GCA_000598385.1_ASM59838v1	-	3998 T(B) 4
Streptococcus thermophilus	1308	PRJNA335822	335822	Terrabacteria group	Firmicutes	1.78937	39	-	MCHW01	76	1930	1644	11/7/16	4/11/17	Contig	Universita Cattolica del Sacro Cuore	SAMN05463208	GCA_001867245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/245/GCA_001867245.1_ASM186724v1	-	UC8547
Lactobacillus reuteri	1598	PRJNA342243	342243	Terrabacteria group	Firmicutes	1.97032	38.8	-	MIMS01	142	1950	1811	5/11/17	5/22/17	Contig	Seoul National University	SAMN05751493	GCA_002128635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/635/GCA_002128635.1_ASM212863v1	-	KLR3003
Burkholderia cenocepacia	95486	PRJNA301637	301637	Proteobacteria	Betaproteobacteria	8.97605	65.7	-	LNCR01	109	8429	7983	1/26/16	3/27/17	Contig	Universidad Autonoma del Estado de Morelos	SAMN04252993	GCA_001541445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/445/GCA_001541445.1_ASM154144v1	27125479	CEIB S5-2
Haemophilus influenzae Rd KW20	71421	PRJNA219	219	Proteobacteria	Gammaproteobacteria	1.83014	38.2	chromosome:NC_000907.1/L42023.1	-	1	1765	1610	7/25/95	8/2/16	Complete Genome	TIGR	SAMN02603991	GCA_000027305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/027/305/GCA_000027305.1_ASM2730v1	"754,280,075,428,028,000,000"	-
Helicobacter acinonychis str. Sheeba	382638	PRJNA17251	17251	Proteobacteria	delta/epsilon subdivisions	1.55759	38.1915	chromosome:NC_008229.1/AM260522.1; plasmid pHac1:NC_008230.1/AM260523.1	-	2	1549	1362	6/28/06	4/6/17	Complete Genome	Penn State Univ.	SAMEA3138199	GCA_000009305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/305/GCA_000009305.1_ASM930v1	16789826	Sheeba
Bacillus pumilus	1408	PRJNA324411	324411	Terrabacteria group	Firmicutes	3.82484	41.5	-	LYXP01	36	3987	3801	6/23/16	4/5/17	Contig	California State University Fresno	SAMN05202149	GCA_001675655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/655/GCA_001675655.1_ASM167565v1	-	CB01
Corynebacterium glutamicum	1718	PRJNA305677	305677	Terrabacteria group	Actinobacteria	3.27523	54.1	-	LOQX01	57	3180	2985	12/21/16	5/1/17	Contig	Shanghai Institutes for Biological Sciences (SIBS) of Chinese Academy of Sciences (CAS)	SAMN04331507	GCA_001912805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/805/GCA_001912805.1_ASM191280v1	28198668	ATCC 21493
Burkholderia mallei 2002721280	370895	PRJNA16352	16352	Proteobacteria	Betaproteobacteria	5.69817	68.3	-	AANX02	131	5950	5447	2/14/06	5/18/17	Scaffold	TIGR	SAMN02435874	GCA_000153085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/085/GCA_000153085.1_ASM15308v1	-	2002721280
Lactococcus garvieae	1363	PRJDB4555	322159	Terrabacteria group	Firmicutes	2.00011	38.1748	chromosome:AP017373.1; plasmid pNALG-1:AP017399.1	-	2	2051	1976	5/18/16	5/18/16	Complete Genome	"Research Center for Aquatic Genomics, National Research Institute of Fisheries Science, Fisheries Research Agency"	SAMD00046983	GCA_002355575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/575/GCA_002355575.1_ASM235557v1	-	122061
Ralstonia solanacearum	305	PRJEB8309	279369	Proteobacteria	Betaproteobacteria	4.78826	66.9	-	CDRX01	1	4307	4067	3/24/15	4/4/17	Scaffold	CIRAD	SAMEA3218685	GCA_001373295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/295/GCA_001373295.1_RS2	-	RS2
Vibrio cholerae	666	PRJNA276767	276767	Proteobacteria	Gammaproteobacteria	4.03378	47.5205	chromosome I:NZ_CM003192.1/CM003192.1; chromosome II:NZ_CM003193.1/CM003193.1	JZCC01	2	3784	3514	3/23/15	3/26/17	Chromosome	Irkutsk Antiplague Research Institute of Rospotrebnadzor	SAMN03380744	GCA_000967785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/785/GCA_000967785.1_ASM96778v1	-	I-1300
Clostridioides difficile T19	1215083	PRJEB213	222749	Terrabacteria group	Firmicutes	3.9562	28.3	-	CANA01	247	3634	3506	10/14/13	3/16/17	Scaffold	LPBA	SAMEA3138889	GCA_000530695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/695/GCA_000530695.1_T19	24482682	T19
Shigella boydii	621	PRJNA288465	288465	Proteobacteria	Gammaproteobacteria	4.47477	50.6	-	LPTI01	413	5135	4257	12/15/16	2/26/17	Contig	"University of Maryland, School of Medicine"	SAMN04001698	GCA_001906225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/225/GCA_001906225.1_ASM190622v1	-	602339_II
Streptococcus salivarius	1304	PRJNA320256	320256	Terrabacteria group	Firmicutes	2.24377	39.8	-	LXIP01	61	2081	1983	12/16/16	4/6/17	Contig	State University of Campinas	SAMN04934535	GCA_001907065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/065/GCA_001907065.1_ASM190706v1	-	85-04 S22
Bacillus megaterium WSH-002	1006007	PRJNA71447	71447	Terrabacteria group	Firmicutes	5.07529	38.1493	chromosome:NC_017138.1/CP003017.1; plasmid WSH-002_p1:NC_017139.1/CP003018.1; plasmid WSH-002_p2:NC_017140.1/CP003019.1; plasmid WSH-002_p3:NC_017141.1/CP003020.1	-	4	5240	4841	9/2/11	6/15/17	Complete Genome	"Jiangnan University, State Key Laboratory of Food Science and Technology; Tianjin Biochip Corperation"	SAMN02603461	GCA_000225265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/265/GCA_000225265.1_ASM22526v1	22038958	WSH-002
Brucella abortus	235	PRJNA400357	400357	Proteobacteria	Alphaproteobacteria	3.79437	56.8146	chromosome 1:CP023239.1; chromosome 2:CP023240.1	-	2	3669	3225	9/12/17	9/12/17	Chromosome	IZSM-Portici	SAMN07572695	GCA_002291365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/365/GCA_002291365.1_ASM229136v1	-	72871
Yersinia pseudotuberculosis	633	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.8575	47.2	-	CPWG01	94	4565	4160	3/23/15	4/3/17	Scaffold	SC	SAMEA859940	GCA_001123345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/345/GCA_001123345.1_5139_1_6	-	Y428
Lactobacillus delbrueckii subsp. bulgaricus CNCM I-1519	1042400	PRJNA67861	67861	Terrabacteria group	Firmicutes	1.79654	49.9	-	AGHW01	70	1897	1678	10/28/11	3/30/17	Contig	Washington University School of Medicine Center for Genome Sciences and Systems Biology	SAMN02436863	GCA_000284715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/715/GCA_000284715.1_ASM28471v1	22030749	CNCM I-1519
Leptospira borgpetersenii	174	PRJNA257146	257146	Spirochaetes	Spirochaetia	3.75863	40.3	-	JQSA01	305	3646	3213	2/24/16	4/5/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947778	GCA_001569485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/485/GCA_001569485.1_ASM156948v1	26833181	56613
Weissella paramesenteroides	1249	PRJNA231221	231221	Terrabacteria group	Firmicutes	1.94791	38.1	chromosome:CP023501.1	-	1	1925	1787	9/28/17	9/28/17	Complete Genome	US Food and Drug Administration 	SAMN07312458	GCA_002386265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/265/GCA_002386265.1_ASM238626v1	-	FDAARGOS_414
Campylobacter fetus subsp. testudinum	1507806	PRJNA285181	285181	Proteobacteria	delta/epsilon subdivisions	1.73617	33.1	-	LFXG01	68	1751	1669	8/5/16	4/5/17	Contig	Utrecht University	SAMN03741941	GCA_001699425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/425/GCA_001699425.1_ASM169942v1	27333878	D6683
Xanthomonas oryzae	347	PRJNA257008	257008	Proteobacteria	Gammaproteobacteria	4.53463	64	-	LHUI01	361	4385	3367	8/31/15	4/11/17	Contig	µFORGE	SAMN03862118	GCA_001277095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/095/GCA_001277095.1_XANT003-SEQ-2-ASM-1	-	CFPB1947
Oenococcus oeni S13	1428437	PRJNA229642	229642	Terrabacteria group	Firmicutes	1.81445	37.8	-	AZKB01	66	1853	1652	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02902405	GCA_000761785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/785/GCA_000761785.1_Oeoe_S13_1.0	24901216	S13
Streptococcus mitis	28037	PRJNA274768	274768	Terrabacteria group	Firmicutes	1.97317	40	-	JYGS01	8	2003	1837	3/23/15	4/18/17	Contig	University at Buffalo	SAMN03334902	GCA_000960065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/065/GCA_000960065.1_ASM96006v1	25999552	SK145
Aeromonas salmonicida subsp. salmonicida	29491	PRJNA264317	264317	Proteobacteria	Gammaproteobacteria	4.77377	58.5	-	MIIT01	109	4588	4109	12/13/16	4/6/17	Contig	Universite Laval	SAMN05728471	GCA_001902105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/105/GCA_001902105.1_ASM190210v1	-	JF2507
Vibrio parahaemolyticus 861	1238201	PRJNA176635	176635	Proteobacteria	Gammaproteobacteria	5.18295	45.3	-	AZGV01	93	5048	4747	1/30/14	3/18/17	Scaffold	IGS	SAMN01923894	GCA_000524535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/535/GCA_000524535.2_vp861	-	861
Listeria monocytogenes	1639	PRJEB6403	251923	Terrabacteria group	Firmicutes	2.86466	38.1	chromosome 1:NZ_LT906436.1/LT906436.1	-	1	2906	2785	8/15/17	8/28/17	Complete Genome	SC	SAMEA44515918	GCA_900187225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/225/GCA_900187225.1_51881_G01	-	NCTC10357
Coxiella burnetii RSA 493	227377	PRJEB4294	218957	Proteobacteria	Gammaproteobacteria	1.95694	42.5	-	CCYB01	67	2143	1803	10/9/14	4/3/17	Contig	URMITE	SAMEA2610543	GCA_000820825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/825/GCA_000820825.1_Coxiella_burnetii_Dog_Utad	-	RSA 493
Lactobacillus casei	1582	PRJNA378122	378122	Terrabacteria group	Firmicutes	2.72607	46.5	-	MWVD01	119	2829	2592	3/14/17	3/16/17	Contig	The University of Hong Kong	SAMN06479973	GCA_002027405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/405/GCA_002027405.1_ASM202740v1	-	W16
Salinispora arenicola CNB458	1136425	PRJNA169831	169831	Terrabacteria group	Actinobacteria	5.70414	69.5	-	AZWI01	132	5290	4798	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597239	GCA_000514655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/655/GCA_000514655.1_ASM51465v1	-	CNB458
Vibrio harveyi E385	1352943	PRJNA210120	210120	Proteobacteria	Gammaproteobacteria	6.35419	44.8	-	AYKI01	84	6008	5636	10/31/13	4/2/17	Scaffold	"Third Institute of Oceanography, State Oceanic Administration"	SAMN02221893	GCA_000493315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/315/GCA_000493315.1_Vibrio_harveyi_E385_Genome_sequencing	24336361	E385
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.90591	38.1	chromosome:NZ_CP020830.1/CP020830.1	-	1	2969	2857	4/24/17	4/26/17	Complete Genome	FDA/CFSAN	SAMN02769705	GCA_002105655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/655/GCA_002105655.1_ASM210565v1	-	MOD1_LS152
Porphyromonas gingivalis	837	PRJEB10280	362716	FCB group	Bacteroidetes/Chlorobi group	2.29052	48.6	-	FUFJ01	88	2057	1870	2/2/17	4/6/17	Scaffold	"Melbourne Dental School, University of Melbourne"	SAMEA3505350	GCA_900157345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/345/GCA_900157345.1_AFR-5B1	-	AFR5B1
Vibrio fischeri CB37	1367486	PRJNA212805	212805	Proteobacteria	Gammaproteobacteria	4.95236	45.8	-	AUUV01	4998	-	-	6/8/17	6/8/17	Contig	University of New Mexico	SAMN06226651	GCA_002179685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/685/GCA_002179685.1_ASM217968v1	-	CB37
Clostridium botulinum	1491	PRJNA290143	290143	Terrabacteria group	Firmicutes	3.0058	27.9	-	LGVR01	131	2880	2759	8/11/15	3/26/17	Scaffold	Anses	SAMN03876592	GCA_001264505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/505/GCA_001264505.1_ASM126450v1	26430029	12LNRI-CD
Burkholderia multivorans	87883	PRJEB12789	382513	Proteobacteria	Betaproteobacteria	6.32293	67.2	-	FKJX01	3	6030	5796	4/11/17	7/9/17	Contig	LM-UGent	SAMEA3876910	GCA_900079495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/495/GCA_900079495.1_ASM90007949v1	-	-
Borreliella burgdorferi	139	PRJNA231221	231221	Spirochaetes	Spirochaetia	1.34025	28.5	-	NBTP01	12	1411	1176	4/10/17	4/13/17	Contig	US Food and Drug Administration 	SAMN04875533	GCA_002083055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/055/GCA_002083055.1_ASM208305v1	-	FDAARGOS_196
Treponema pallidum subsp. pallidum	161	PRJNA322283	322283	Spirochaetes	Spirochaetia	1.13915	52.8	chromosome:NZ_CP016058.1/CP016058.1	-	1	1066	1003	8/25/16	4/5/17	Chromosome	"National Institute of Health, Portugal"	SAMN05150625	GCA_001713115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/115/GCA_001713115.1_ASM171311v1	-	PT_SIF1156
Rhizobium leguminosarum bv. viciae 248	936136	PRJNA81757	81757	Proteobacteria	Alphaproteobacteria	7.28851	60.9	-	ARRT01	7	7148	6821	4/26/13	4/1/17	Contig	JGI	SAMN02261297	GCA_000385155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/155/GCA_000385155.1_ASM38515v1	-	248
Brucella suis 04-0115	1388743	PRJNA217067	217067	Proteobacteria	Alphaproteobacteria	3.31801	57.2	-	AXMU01	6	3383	3155	10/24/13	4/2/17	Scaffold	Broad Institute	SAMN02334521	GCA_000480055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/055/GCA_000480055.1_Bruc_suis_04-0115_V1	-	04-0115
Enterococcus faecalis TX4248	749495	PRJNA47143	47143	Terrabacteria group	Firmicutes	3.18702	37.1	-	AEBR01	85	3304	3136	9/9/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189132	GCA_000147925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/925/GCA_000147925.1_ASM14792v1	-	TX4248
Borrelia garinii IPT140	1408857	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.10675	27.7	-	AYBG01	448	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378824	GCA_000501275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/275/GCA_000501275.1_BorGarIPT140	-	IPT140
Streptococcus mutans TCI-177	1074144	PRJNA72035	72035	Terrabacteria group	Firmicutes	1.88295	36.8	-	AGLD01	110	1915	1787	10/6/11	3/22/17	Contig	JCVI	SAMN02436606	GCA_000229245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/245/GCA_000229245.2_SMUT5-NEX_21-177	-	TCI-177
Neisseria gonorrhoeae MS11	528354	PRJNA32795	32795	Proteobacteria	Betaproteobacteria	2.23332	52.4	-	AKCH01	8	2660	2312	6/15/12	4/11/17	Contig	Broad Institute	SAMN02596923	GCA_000273685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/685/GCA_000273685.1_PB_Neis_gono_MS11_V1	22829535	MS11
Enterococcus faecium TX0133C	749525	PRJNA47203	47203	Terrabacteria group	Firmicutes	2.90786	37.7	-	AEBG01	193	3021	2872	8/30/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189143	GCA_000147315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/315/GCA_000147315.1_ASM14731v1	-	TX0133C
Chlamydia psittaci 02DC24	1112260	PRJNA77093	77093	PVC group	Chlamydiae	1.19211	39.1	-	ATMV01	25	1068	1002	6/27/13	4/1/17	Scaffold	University of Maryland School of Medicine	SAMN00860212	GCA_000417585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/585/GCA_000417585.1_ASM41758v1	-	02DC24
Bifidobacterium animalis subsp. lactis ATCC 27673	1167629	PRJNA215974	215974	Terrabacteria group	Actinobacteria	1.93714	60.6	-	AWFP01	21	1654	1560	8/11/15	4/3/17	Scaffold	"Food Science and Technology Institute, Morinaga Milk Industry Co., Ltd"	SAMN03978811	GCA_001264015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/015/GCA_001264015.1_ASM126401v1	26236711	ATCC 27673
Bacillus amyloliquefaciens	1390	PRJNA271043	271043	Terrabacteria group	Firmicutes	3.87327	46.6	-	JXAT01	21	3836	3695	1/6/15	4/2/17	Contig	China Agricultural University	SAMN03272507	GCA_000815275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/275/GCA_000815275.1_ASM81527v1	-	LPL-K103
Stenotrophomonas maltophilia	40324	PRJNA261822	261822	Proteobacteria	Gammaproteobacteria	4.88958	66.7	-	LBFT01	179	4604	4403	4/23/15	3/26/17	Contig	Universitat Autonoma de Barcelona	SAMN03076212	GCA_000978875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/978/875/GCA_000978875.1_ASM97887v1	26067959	UV74
Bifidobacterium bifidum	1681	PRJNA321218	321218	Terrabacteria group	Actinobacteria	1.67851	62.8	-	MNQB01	33	1403	1169	12/23/16	12/23/16	Scaffold	None	SAMN05717207	GCA_001915215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/215/GCA_001915215.1_ASM191521v1	27819664	-
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.1337	41.2	-	CVZG01	81	2072	1896	6/24/15	3/26/17	Contig	SC	SAMEA1032773	GCA_001175405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/405/GCA_001175405.1_6830_4_95	-	EQUI0240
[Haemophilus] parasuis	738	PRJNA301181	301181	Proteobacteria	Gammaproteobacteria	2.49073	39.5	-	MNAY01	128	2415	2195	1/6/17	4/6/17	Scaffold	Chinese Academy of Agricultural Sciences	SAMN04230868	GCA_001938335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/335/GCA_001938335.1_ASM193833v1	-	K3
Pasteurella multocida subsp. multocida	44283	PRJNA244095	244095	Proteobacteria	Gammaproteobacteria	2.35197	40.3	-	JQAD01	38	2235	2153	6/13/15	4/3/17	Contig	Murdoch University	SAMN02721611	GCA_001027665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/665/GCA_001027665.1_ASM102766v1	26151935	PVAcc
Lactobacillus rhamnosus	47715	PRJNA256139	256139	Terrabacteria group	Firmicutes	2.92214	46.7	-	JPZB01	90	2989	2767	8/22/14	4/2/17	Contig	Vavilov Institute of General Genetics	SAMN02983263	GCA_000743075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/075/GCA_000743075.1_ASM74307v1	-	24
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31262	57.1716	chromosome 1:NZ_CP018498.1/CP018498.1; chromosome 2:NZ_CP018499.1/CP018499.1	-	2	3373	3142	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932952	GCA_002191395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/395/GCA_002191395.1_ASM219139v1	28388689	BwIM_JOR_13
Haemophilus influenzae	727	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	1.8306	38.1	chromosome:NZ_CP020411.1/CP020411.1	-	1	1823	1633	3/29/17	4/1/17	Complete Genome	US Food and Drug Administration 	SAMN04875536	GCA_002073475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/475/GCA_002073475.1_ASM207347v1	-	FDAARGOS_199
Bordetella bronchiseptica OSU095	1331241	PRJNA202153	202153	Proteobacteria	Betaproteobacteria	5.46004	68	-	JGXY01	54	5220	5068	5/12/14	4/2/17	Contig	JCVI	SAMN02231296	GCA_000689955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/955/GCA_000689955.1_gbb45v01	25908122	OSU095
Sinorhizobium meliloti MVII-I	1041155	PRJNA162981	162981	Proteobacteria	Alphaproteobacteria	7.26529	61.9	-	ATTK01	220	7396	6679	7/9/13	4/1/17	Contig	DOE Joint Genome Institute	SAMN02440921	GCA_000419645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/645/GCA_000419645.1_ASM41964v1	-	MVII-I
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.47212	53.6	-	MLBK01	43	2438	2208	10/13/16	8/3/17	Contig	Institute for Medical Research	SAMN05877647	GCA_001832935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/935/GCA_001832935.1_ASM183293v1	28254972	c325
[Haemophilus] ducreyi	730	PRJNA318024	318024	Proteobacteria	Gammaproteobacteria	1.66745	38.1	chromosome:NZ_CP015424.1/CP015424.1	-	1	1642	1477	5/19/16	4/5/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04632439	GCA_001647655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/655/GCA_001647655.1_ASM164765v1	-	VAN1
Yersinia enterocolitica subsp. palearctica YE-P1	1329363	PRJNA200682	200682	Proteobacteria	Gammaproteobacteria	4.55083	46.9	-	ASHT01	86	4335	3971	5/28/13	3/24/17	Contig	Max von Pettenkofer-Institut	SAMN02403947	GCA_000401975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/975/GCA_000401975.1_YE-P1_1.0	23846271	YE-P1
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.04321	41.6	-	JJPG01	160	3479	3281	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708946	GCA_000979575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/575/GCA_000979575.1_gtlEnvA5udCFS	25756680	3.F.A.2.6
Leuconostoc mesenteroides subsp. cremoris	33965	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.63087	38	-	MPEJ01	109	1767	1408	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981482	GCA_002092455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/455/GCA_002092455.1_ASM209245v1	28217118	LMGCF20
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.16291	39.9	-	FPMF01	5	1063	962	5/10/17	5/24/17	Scaffold	WTSI	SAMEA1094376	GCA_900118745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/745/GCA_900118745.1_7067_6_51	-	C23_98
Serratia marcescens LCT-SM262	1348337	PRJNA208980	208980	Proteobacteria	Gammaproteobacteria	5.16015	58.8	-	ATJX01	55	4913	4245	7/30/13	4/10/17	Scaffold	BGI	SAMN02469362	GCA_000442375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/375/GCA_000442375.1_S.marcescens_LCT-SM262	-	LCT-SM262
[Haemophilus] ducreyi	730	PRJNA318024	318024	Proteobacteria	Gammaproteobacteria	1.6671	38.1	chromosome:NZ_CP015426.1/CP015426.1	-	1	1639	1475	5/19/16	4/5/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04632441	GCA_001647735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/735/GCA_001647735.1_ASM164773v1	-	VAN3
Mannheimia haemolytica	75985	PRJNA181191	181191	Proteobacteria	Gammaproteobacteria	2.5971	41	-	LFYD01	116	2685	2502	3/23/16	4/5/17	Contig	Agriculture and Agri-Food Canada	SAMN03840635	GCA_001596715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/715/GCA_001596715.1_ASM159671v1	26926339	157-4-1
Lactobacillus brevis	1580	PRJEB17528	359565	Terrabacteria group	Firmicutes	2.75198	45.4	-	FPCR01	198	2859	2572	12/31/16	5/31/17	Contig	Microbiology and Fermentation	SAMEA4527925	GCA_900117045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/045/GCA_900117045.1_ASM90011704v1	-	-
Campylobacter coli 2553	887316	PRJNA52769	52769	Proteobacteria	delta/epsilon subdivisions	1.82567	31	-	AIMM01	208	1905	1806	3/16/12	3/15/17	Contig	Cornell University	SAMN02428967	GCA_000253495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/495/GCA_000253495.2_ASM25349v2	23279811	2553
Burkholderia sp. AU4i	1335308	PRJNA203354	203354	Proteobacteria	Betaproteobacteria	9.26797	66.2	-	ASSI01	506	8957	8244	9/13/13	4/9/17	Contig	Institute of Microbial Technology	SAMN02469984	GCA_000466765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/765/GCA_000466765.1_Burkholderia_vietnamiensis	-	AU4i
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.01787	66.9	-	LPCP01	99	6476	6152	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449407	GCA_001528545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/545/GCA_001528545.1_ASM152854v1	-	AU25340
Propionibacterium acnes HL046PA1	765094	PRJNA49221	49221	Terrabacteria group	Actinobacteria	2.47811	60	-	ADZQ01	15	2492	2366	7/29/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189220	GCA_000144285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/285/GCA_000144285.1_ASM14428v1	-	HL046PA1
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.37283	32.7	-	CUFW01	67	2324	2201	3/31/15	3/26/17	Contig	SC	SAMEA1035060	GCA_001228185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/185/GCA_001228185.1_7068_7_30	-	135665
Proteus mirabilis	584	PRJNA308381	308381	Proteobacteria	Gammaproteobacteria	4.04796	38.9	-	LQNN01	59	3836	3639	4/8/16	4/5/17	Contig	"Zhongshan School of Medicine, Sun Yat-sen University"	SAMN04395118	GCA_001617295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/295/GCA_001617295.1_ASM161729v1	-	GB08
Enterobacter cloacae UCICRE 5	1329853	PRJNA201988	201988	Proteobacteria	Gammaproteobacteria	5.06286	55.3	-	AYIK01	3	4941	4666	10/30/13	4/10/17	Scaffold	Broad Institute	SAMN02138610	GCA_000492575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/575/GCA_000492575.1_Ente_cloa_UCI_5_V1	-	UCICRE 5
Cronobacter sakazakii E764	1159490	PRJNA89095	89095	Proteobacteria	Gammaproteobacteria	4.44086	57	-	AJLA01	32	4260	3734	6/7/13	4/1/17	Contig	Cronobacter Genus Genome Sequencing Consortium	SAMN02952934	GCA_000409245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/245/GCA_000409245.1_Csak764_final_contigs	23724777	E764
Klebsiella oxytoca	571	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.06399	55	-	JVQJ01	121	5779	5539	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197389	GCA_001054575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/575/GCA_001054575.1_ASM105457v1	26230489	197_KOXY
Lactobacillus salivarius	1624	PRJNA321782	321782	Terrabacteria group	Firmicutes	2.07512	32.8	-	LXZC01	91	2096	1936	9/12/17	9/14/17	Contig	Seoul National University	SAMN05003808	GCA_002289845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/845/GCA_002289845.1_ASM228984v1	-	KLW005
Moraxella catarrhalis	480	PRJNA297370	297370	Proteobacteria	Gammaproteobacteria	1.95464	41.5	-	LXHV01	47	1851	1692	6/3/16	4/5/17	Contig	Drexel University College of Medicine	SAMN04122788	GCA_001656385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/385/GCA_001656385.1_ASM165638v1	26912404	C031
Mycobacterium abscessus M93	1149134	PRJNA84203	84203	Terrabacteria group	Actinobacteria	5.0736	64.1	-	AJGF01	41	5007	4889	3/30/12	3/18/17	Contig	"Faculty of Dentistry, Universiti Malaya, Kuala Lumpur"	SAMN02471415	GCA_000257225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/225/GCA_000257225.2_ASM25722v2	22628507	M93
Bifidobacterium breve	1685	PRJDB4597	325619	Terrabacteria group	Actinobacteria	2.61462	59.2	-	BCXS01	66	2386	2151	6/10/16	4/5/17	Contig	Yakult Central Institute	SAMD00047603	GCA_001685845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/845/GCA_001685845.1_ASM168584v1	27340092	BR-21
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.18721	36.7	-	LPSB01	17	2314	2165	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305162	GCA_001560455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/455/GCA_001560455.1_NG05B_C06_05	-	NG05B_C06_05
Staphylococcus saprophyticus	29385	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.66994	33	-	LMZK01	45	2646	2473	9/28/16	4/5/17	Scaffold	Tufts University	SAMN04244243	GCA_001747485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/485/GCA_001747485.1_ASM174748v1	-	9777
Vibrio sp. J2-8	1507973	PRJEB5890	284696	Proteobacteria	Gammaproteobacteria	5.38061	44.5	-	CCKL01	98	4720	4597	5/20/15	4/10/17	Contig	STATION BIOLOGIQUE DE ROSCOFF	SAMEA2594000	GCA_001048615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/615/GCA_001048615.1_VRSK8v1_PRJEB5890	-	J2-8
Pseudomonas stutzeri	316	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.6387	63.8	-	JVNQ01	144	4331	4114	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197460	GCA_001064225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/225/GCA_001064225.1_ASM106422v1	26230489	267_PSTU
Aeromonas hydrophila	644	PRJNA270277	270277	Proteobacteria	Gammaproteobacteria	4.68278	61.7	-	JWJQ01	70	4296	4129	1/2/15	4/2/17	Contig	University of Malaya	SAMN03265385	GCA_000813465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/465/GCA_000813465.1_ASM81346v1	-	L14f
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.6825	67	-	LOVO01	180	7044	6581	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449205	GCA_001523775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/775/GCA_001523775.1_ASM152377v1	-	MSMB1186
Flavobacterium psychrophilum	96345	PRJEB21067	396411	FCB group	Bacteroidetes/Chlorobi group	2.73555	32.3	-	FYCA01	79	2496	2409	7/29/17	8/7/17	Contig	INRA	SAMEA104125238	GCA_900186395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/395/GCA_900186395.1_FPFI055_V1	-	FI055
Escherichia albertii	208962	PRJDB3047	301492	Proteobacteria	Gammaproteobacteria	4.72743	49.5	-	BBWC01	53	4839	4488	11/6/15	2/25/17	Scaffold	University of Miyazaki	SAMD00026641	GCA_001515045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/045/GCA_001515045.1_ASM151504v1	26537224	K7756
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.6874	47.6	-	MEBX01	87	3379	3222	11/18/16	4/5/17	Contig	The University of Queensland	SAMN05200558	GCA_001883195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/195/GCA_001883195.1_ASM188319v1	-	AHL2
Pectobacterium carotovorum subsp. brasiliense	180957	PRJNA269213	269213	Proteobacteria	Gammaproteobacteria	4.85706	52	-	JUJD01	14	4374	4188	12/29/14	4/2/17	Scaffold	Beijing Academy of Agriculture and Forestry Sciences	SAMN03252595	GCA_000808145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/145/GCA_000808145.1_ASM80814v1	-	YC D62
Lactobacillus crispatus	47770	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.05427	36.9	-	LYQY01	74	2113	1890	7/14/17	7/17/17	Scaffold	University of Minnesota	SAMN04498980	GCA_002218685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/685/GCA_002218685.1_ASM221868v1	-	UMNLC8
Aggregatibacter actinomycetemcomitans serotype c str. AAS4A	1167010	PRJNA91107	91107	Proteobacteria	Gammaproteobacteria	2.12606	44.7	-	AJMG02	28	2045	1877	1/24/13	4/4/17	Scaffold	"Bumgarner laboratory, Department of Microbiology, University of Washington"	SAMN02471982	GCA_000332895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/895/GCA_000332895.2_AaAAS4av2.0	23194436	AAS4A
Gardnerella vaginalis 1400E	698956	PRJNA42445	42445	Terrabacteria group	Actinobacteria	1.71633	41.2	-	ADER01	28	1472	1339	5/21/12	3/30/17	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393779	GCA_000263495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/495/GCA_000263495.1_ASM26349v1	-	1400E
Lactobacillus paracasei subsp. tolerans Lpl14	1256229	PRJNA178433	178433	Terrabacteria group	Firmicutes	3.0141	46.3	-	ANKB01	141	3151	2906	6/11/13	4/1/17	Contig	Danone Research	SAMN02469703	GCA_000410335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/335/GCA_000410335.1_ASM41033v1	23894338	Lpl14
Staphylococcus hominis	1290	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.33975	31.6	-	JUSP01	49	2305	2213	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03198007	GCA_001077185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/185/GCA_001077185.1_ASM107718v1	26230489	794_SEPI
Staphylococcus capitis	29388	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.3924	32.7	-	JVGZ01	56	2324	2176	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197633	GCA_001071095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/095/GCA_001071095.1_ASM107109v1	26230489	441_SEPI
Rhodococcus hoagii	43767	PRJNA316970	316970	Terrabacteria group	Actinobacteria	5.12563	68.8	-	LWIA01	82	4814	4657	4/18/17	6/6/17	Contig	The University of Edinburgh	SAMN04632328	GCA_002095235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/235/GCA_002095235.1_ASM209523v1	27638249	PAM1533
Klebsiella variicola	244366	PRJNA357969	357969	Proteobacteria	Gammaproteobacteria	5.98837	57	-	MSCS01	282	6034	5672	6/29/17	7/1/17	Contig	Fatima Jinnah Women University	SAMN06163066	GCA_002211425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/425/GCA_002211425.1_ASM221142v1	-	MB351
Acinetobacter nosocomialis	106654	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.95674	38.8	-	LYGU01	79	3819	3640	11/2/16	4/5/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745508	GCA_001862695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/695/GCA_001862695.1_ASM186269v1	-	XH762
Streptococcus oralis	1303	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.98272	41.1	-	JVUD01	99	1924	1832	7/10/15	4/3/17	Contig	University of Washington	SAMN03197291	GCA_001069675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/675/GCA_001069675.1_ASM106967v1	26230489	1314_SORA
Achromobacter xylosoxidans	85698	PRJNA343957	343957	Proteobacteria	Betaproteobacteria	7.115	67.3	-	MJMN01	65	6691	6492	1/19/17	4/6/17	Scaffold	University Laval	SAMN05806604	GCA_001957065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/957/065/GCA_001957065.1_ASM195706v1	-	AUS488
Pseudoalteromonas sp. P1-26	1723759	PRJNA294442	294442	Proteobacteria	Gammaproteobacteria	4.71581	41.2	-	LKDX01	219	4278	4138	10/21/15	4/11/17	Contig	Hans Knoell Institute	SAMN04027294	GCA_001401795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/795/GCA_001401795.1_ASM140179v1	26679587	P1-26
Vibrio alginolyticus	663	PRJNA318805	318805	Proteobacteria	Gammaproteobacteria	5.23168	44.6	-	MAKC01	179	4764	4619	7/21/16	4/10/17	Scaffold	Massachusetts Institute of Technology	SAMN04867927	GCA_001691185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/185/GCA_001691185.1_ASM169118v1	-	FF273
[Haemophilus] ducreyi	730	PRJNA318024	318024	Proteobacteria	Gammaproteobacteria	1.67305	38.1	chromosome:NZ_CP015427.1/CP015427.1	-	1	1653	1486	5/19/16	4/5/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04632442	GCA_001647765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/765/GCA_001647765.1_ASM164776v1	-	VAN4
Enterobacter asburiae	61645	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.90681	55.8	-	LRCJ01	104	4892	4607	1/19/16	4/4/17	Contig	JCVI	SAMN04407777	GCA_001518285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/285/GCA_001518285.1_ASM151828v1	-	GN03667
Brucella sp. CMUL 026	1912099	PRJNA349238	349238	Proteobacteria	Alphaproteobacteria	3.29588	57.2	-	MNBN01	51	3374	3146	1/6/17	4/16/17	Contig	LAU	SAMN05929026	GCA_001938165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/165/GCA_001938165.1_ASM193816v1	-	CMUL 026
Pseudomonas amygdali pv. aesculi	251722	PRJNA287460	287460	Proteobacteria	Gammaproteobacteria	6.16294	58.3	-	LIKY01	324	6006	5298	1/25/16	4/4/17	Contig	University of Edinburgh	SAMN03782321	GCA_001537965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/965/GCA_001537965.1_ASM153796v1	27145446	2113
Xanthomonas euvesicatoria	456327	PRJNA275488	275488	Proteobacteria	Gammaproteobacteria	5.51186	64.3	-	JZLP01	567	4876	4434	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03349322	GCA_001008985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/985/GCA_001008985.1_v1	26089818	315
Acinetobacter pittii	48296	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.83142	38.8	-	LLGR01	349	3785	3522	10/27/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145709	GCA_001415485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/485/GCA_001415485.1_ASM141548v1	-	ABBL090
Leptospira santarosai serovar Bananal	1542967	PRJNA360567	360567	Spirochaetes	Spirochaetia	4.08885	41.7	-	MTSS01	44	4068	3709	2/1/17	4/6/17	Contig	School of Veterinary Medicine and Animal Science / University of Sao Paulo	SAMN06212382	GCA_001981425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/425/GCA_001981425.1_ASM198142v1	-	2ACAP
Citrobacter freundii ATCC 8090 = MTCC 1658	1006003	PRJNA177199	177199	Proteobacteria	Gammaproteobacteria	5.00127	51.7	-	ANAV01	171	4923	4664	11/9/12	5/18/17	Contig	"Institute of Microbial Technology (IMTECH), Chandigarh"	SAMN02469678	GCA_000312465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/465/GCA_000312465.1_ASM31246v1	23405287	MTCC 1658
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.92947	55.1	-	JWRS01	85	4858	4616	12/23/14	3/25/17	Contig	JCVI	SAMN03012825	GCA_000807535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/535/GCA_000807535.1_ASM80753v1	-	ND1
Vibrio anguillarum	55601	PRJNA267040	267040	Proteobacteria	Gammaproteobacteria	4.19189	44.6182	chromosome I:CP010078.1; chromosome II:CP010079.1; plasmid pJM1:CP016265.1	-	3	3643	3507	2/7/17	2/7/17	Chromosome	University of Copenhagen	SAMN03177461	GCA_001990105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/105/GCA_001990105.1_ASM199010v1	-	VA1
Kingella kingae KK411	1305777	PRJEB1629	194478	Proteobacteria	Betaproteobacteria	1.99145	46.7	-	CBTG01	1	1996	1675	9/12/13	4/2/17	Scaffold	URMITE	SAMEA2272158	GCA_000470615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/615/GCA_000470615.1_KK411	-	KK411
Streptococcus pseudopneumoniae	257758	PRJNA302716	302716	Terrabacteria group	Firmicutes	2.11519	39.9	-	MUXQ01	75	2273	1964	3/3/17	3/15/17	Scaffold	TAILORED-Treatment project	SAMN06299414	GCA_002014925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/925/GCA_002014925.1_ASM201492v1	-	CCUG 62647
Xanthomonas perforans	442694	PRJNA276687	276687	Proteobacteria	Gammaproteobacteria	5.16334	64.8	-	JZVZ01	91	4692	4333	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03379913	GCA_001010085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/085/GCA_001010085.1_ASM101008v1	26089818	GEV1063
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.38229	54.5	-	LAAC01	67	5314	5042	3/19/15	4/6/17	Contig	JCVI	SAMN03283620	GCA_000957705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/705/GCA_000957705.1_ASM95770v1	-	35003
Aeromonas veronii	654	PRJNA296464	296464	Proteobacteria	Gammaproteobacteria	4.67998	58.6	-	LKJX01	49	4341	4120	11/19/15	4/4/17	Scaffold	Texas Tech University	SAMN04099658	GCA_001446675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/675/GCA_001446675.1_ASM144667v1	26824353	TTU2014-130ASC
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98855	64.1	-	FVFC01	24	4949	4805	3/10/17	3/18/17	Contig	SC	SAMEA2071442	GCA_900132455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/455/GCA_900132455.1_10665_4_79	-	334
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.73881	66.5	-	LOUM01	131	8112	7666	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449174	GCA_001522945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/945/GCA_001522945.1_ASM152294v1	-	INT3-BP142
Streptococcus sobrinus TCI-377	1074084	PRJNA71935	71935	Terrabacteria group	Firmicutes	2.14477	43.4	-	AGHG01	384	2193	1903	10/6/11	3/30/17	Contig	JCVI	SAMN02436622	GCA_000228405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/405/GCA_000228405.2_SMUT2-NEX_21-377	-	TCI-377
Mycobacterium chelonae	1774	PRJNA323571	323571	Terrabacteria group	Actinobacteria	4.98852	64.1	-	MAFL01	30	4916	4789	3/3/17	3/6/17	Contig	LNCC	SAMN05186792	GCA_002013515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/515/GCA_002013515.1_ASM201351v1	-	D16R19
Rickettsia japonica YH	652620	PRJNA175417	175417	Proteobacteria	Alphaproteobacteria	1.27668	32.3	-	AMRT02	14	1513	1202	10/3/12	4/9/17	Contig	"Unite des Rickettsies, faculte de medicine"	SAMN02597471	GCA_000302635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/635/GCA_000302635.2_ASM30263v2	23209240	YH
Salinispora pacifica CNR114	1137260	PRJNA169788	169788	Terrabacteria group	Actinobacteria	5.8669	69.7	-	AZWO01	99	5524	5095	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597245	GCA_000514775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/775/GCA_000514775.1_ASM51477v1	-	CNR114
Elizabethkingia anophelis	1117645	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	3.87116	35.6	-	MAHH01	25	3513	3422	3/8/17	3/10/17	Contig	CDC	SAMN05256530	GCA_002023425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/425/GCA_002023425.1_ASM202342v1	-	CSID_3000516810
Pseudomonas sp. 7SR1	1881017	PRJEB18901	360704	Proteobacteria	Gammaproteobacteria	6.0903	62	chromosome I:NZ_LT707064.1/LT707064.1	-	1	5345	5193	1/14/17	4/17/17	Chromosome	DOE - JOINT GENOME INSTITUTE	SAMN05428955	GCA_900156465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/465/GCA_900156465.1_IMG-taxon_2681812917_annotated_assembly	-	7SR1
Streptomyces sp. SPB78	591157	PRJNA33597	33597	Terrabacteria group	Actinobacteria	7.55738	70.7	-	ACEU01	4	6439	5373	2/26/09	5/19/17	Scaffold	Broad Institute	SAMN02595296	GCA_000158855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/855/GCA_000158855.1_ASM15885v1	-	SPB78
Paeniclostridium sordellii	1505	PRJEB8152	277676	Terrabacteria group	Firmicutes	3.42474	27.4	-	CDNQ01	31	3327	3214	3/13/15	4/4/17	Contig	WTSI	SAMEA1572103	GCA_001372915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/915/GCA_001372915.1_SSCC32135	-	SSCC32135
Acinetobacter sp. NIPH 2171	1217693	PRJNA183235	183235	Proteobacteria	Gammaproteobacteria	3.50076	42	-	APRS01	7	3368	3088	4/16/13	4/10/17	Scaffold	Broad Institute	SAMN01087857	GCA_000369625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/625/GCA_000369625.1_Acin_sp_NIPH_2171_V1	-	NIPH 2171
Klebsiella sp. NFIX33	1566163	PRJEB16603	349915	Proteobacteria	Gammaproteobacteria	5.28053	58.1	-	FNOQ01	23	5217	4976	10/22/16	7/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159458	GCA_900107085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/085/GCA_900107085.1_IMG-taxon_2600255301_annotated_assembly	-	NFIX33
Flavobacterium sp. B17	95618	PRJDA69959	69959	FCB group	Bacteroidetes/Chlorobi group	4.16575	37.1	-	BACY01	697	3963	3301	12/26/12	5/18/17	Scaffold	Kazusa DNA Research Institute	SAMD00036569	GCA_000333355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/355/GCA_000333355.1_ASM33335v1	-	B17
Bacillus sp. SB49	1071080	PRJNA209234	209234	Terrabacteria group	Firmicutes	3.72633	47	-	ATWS01	12	3826	3740	9/19/13	4/9/17	Scaffold	Directorate of Groundnut Research (Indian Council of Agricultural Research)	SAMN02469735	GCA_000469135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/135/GCA_000469135.1_ASM46913v1	24136852	SB49
Clostridium sp. Marseille-P3244	1871020	PRJEB18023	354764	Terrabacteria group	Firmicutes	2.97227	48.2	-	FQLT01	3	2826	2713	11/24/16	4/16/17	Scaffold	URMITE	SAMEA4555313	GCA_900120155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/155/GCA_900120155.1_PRJEB18023	-	Marseille-P3244
Sphingomonas sp. S17	1007104	PRJNA65571	65571	Proteobacteria	Alphaproteobacteria	4.26841	65.7	-	AFGG01	62	3945	3807	5/3/11	5/19/17	Contig	INDEAR	SAMN02469909	GCA_000211795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/211/795/GCA_000211795.2_SphS17_1.0	21602338	S17
Synechococcus sp. CB0101	232348	PRJNA46501	46501	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.6864	64.2	-	ADXL01	94	2930	2802	6/22/10	4/17/17	Contig	Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN00010394	GCA_000179235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/235/GCA_000179235.1_ASM17923v1	-	CB0101
Rhodococcus sp. ADH	224843	PRJNA294916	294916	Terrabacteria group	Actinobacteria	7.08333	62.3	-	LJIS01	129	6602	6389	9/23/15	4/16/17	Contig	UBA-CONICET	SAMN04038417	GCA_001297885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/885/GCA_001297885.1_ASM129788v1	-	ADH
Enterobacter sp. MGH 4	1329813	PRJNA201919	201919	Proteobacteria	Gammaproteobacteria	4.7556	54.8	-	JCLT01	12	4666	4392	2/3/14	4/2/17	Scaffold	Broad Institute	SAMN02138544	GCA_000534735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/735/GCA_000534735.1_Ente_cloa_complex_MGH_4_V2	-	MGH 4
Staphylococcus sp. HMSC076E07	1715174	PRJNA296302	296302	Terrabacteria group	Firmicutes	2.47077	32.6	-	LTIO01	92	2418	2321	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477567	GCA_001810045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/045/GCA_001810045.1_ASM181004v1	-	HMSC076E07
Corynebacterium sp. HMSC05E07	1581117	PRJNA269886	269886	Terrabacteria group	Actinobacteria	2.79706	59.9	-	LWOI01	85	2596	2443	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03433339	GCA_001807225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/225/GCA_001807225.1_ASM180722v1	-	HMSC05E07
Arthrobacter sp. Leaf141	1736273	PRJNA297956	297956	Terrabacteria group	Actinobacteria	4.3552	66.3	-	LMOL01	45	3999	3852	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151653	GCA_001424565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/565/GCA_001424565.1_Leaf141	26633631	Leaf141
Bradyrhizobium sp. YR681	1144344	PRJNA83113	83113	Proteobacteria	Alphaproteobacteria	7.83171	64.7	-	AKIY01	351	7575	7139	7/27/12	5/18/17	Contig	Oak Ridge National Lab	SAMN00839655	GCA_000282615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/615/GCA_000282615.1_Bradyrhizobium.strYR681_v1.0	23045501	YR681
Streptococcus sp. HMSC057G03	1715165	PRJNA296293	296293	Terrabacteria group	Firmicutes	2.10561	42	-	LTLA01	24	2027	1940	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477536	GCA_001808745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/745/GCA_001808745.1_ASM180874v1	-	HMSC057G03
Mycobacterium sp. UM_RHS	1370118	PRJNA213249	213249	Terrabacteria group	Actinobacteria	6.7759	67.9	-	AUWP01	167	6632	6425	8/26/13	4/8/17	Contig	"Universiti Malaya, Kuala Lumpur"	SAMN02471836	GCA_000455185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/185/GCA_000455185.1_Mycobacterium_sp_UM_RHS	-	UM_RHS
Prevotella sp. P3-92	2024221	PRJNA396820	396820	FCB group	Bacteroidetes/Chlorobi group	3.22639	45.7	-	NPJE01	73	2643	2540	8/14/17	8/16/17	Contig	University of Ljubljana	SAMN07431223	GCA_002251205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/205/GCA_002251205.1_ASM225120v1	-	P3-92
Enterococcus sp. HMSC060D07	1715095	PRJNA296223	296223	Terrabacteria group	Firmicutes	2.97239	37.7	-	LTQS01	302	3069	2890	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498607	GCA_001836555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/555/GCA_001836555.1_ASM183655v1	-	HMSC060D07
Novosphingobium sp. 17-62-8	1970407	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	0.668471	62.3	-	NCIC01	190	725	687	8/16/17	8/16/17	Scaffold	None	SAMN06622252	GCA_002281995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/995/GCA_002281995.1_ASM228199v1	-	-
Methylobacterium sp. ARG-1	1692501	PRJNA291614	291614	Proteobacteria	Alphaproteobacteria	6.29924	69.1	-	LHCD01	92	6102	5757	8/6/15	4/11/17	Contig	Stonehill College	SAMN03939344	GCA_001262595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/595/GCA_001262595.1_ASM126259v1	27257212	ARG-1
Nocardioides sp. JCM 18999	1301083	PRJDB909	245950	Terrabacteria group	Actinobacteria	2.1753	67.8	-	BBFC01	1794	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016829	GCA_001313045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/045/GCA_001313045.1_ASM131304v1	-	JCM 18999
Erythrobacter sp. RIFCSPHIGHO2_12_FULL_63_10	1797975	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	2.32788	61.5	-	MGVU01	605	2467	1643	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04316128	GCA_001800645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/800/645/GCA_001800645.1_ASM180064v1	27774985	-
Acidovorax sp. KNDSW-TSA6	2004485	PRJNA387526	387526	Proteobacteria	Betaproteobacteria	5.138	65.7	-	NOIG01	31	4668	4570	8/10/17	8/12/17	Scaffold	Institute of Microbial Technology	SAMN07156299	GCA_002245625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/625/GCA_002245625.1_ASM224562v1	-	KNDSW-TSA6
Psychrobacter sp. B29-1	1867800	PRJNA326465	326465	Proteobacteria	Gammaproteobacteria	3.19928	42.8	-	MAJM01	9	2697	2600	9/22/16	9/22/16	Scaffold	"Centre for Microbial Ecology and Genomics, University of Pretoria,"	SAMN05278111	GCA_001742065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/065/GCA_001742065.1_ASM174206v1	-	-
Eubacterium sp. 41_20	1897003	PRJNA321218	321218	Terrabacteria group	Firmicutes	2.80049	41.3	-	MNSJ01	81	2600	2444	12/23/16	12/23/16	Scaffold	None	SAMN05717267	GCA_001916395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/395/GCA_001916395.1_ASM191639v1	27819664	-
Paenibacillus sp. OSY-SE	1196323	PRJNA167831	167831	Terrabacteria group	Firmicutes	6.93177	48.7	-	ALKF01	205	6179	5890	8/3/12	5/19/17	Contig	The Ohio State University	SAMN02471152	GCA_000283315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/315/GCA_000283315.1_PaeOsy1.0	23105053	OSY-SE
Ruminococcus sp. N15.MGS-57	1637508	PRJNA277012	277012	Terrabacteria group	Firmicutes	2.35976	43.4	-	LARF01	176	-	-	4/24/15	6/10/15	Scaffold	The Mayo Clinic	SAMN03450004	GCA_000980385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/385/GCA_000980385.1_ASM98038v1	26021920	-
Thioalkalivibrio sp. ALE12	1158170	PRJNA182453	182453	Proteobacteria	Gammaproteobacteria	2.85031	67.3	-	ARLG01	24	2835	2712	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440479	GCA_000381105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/105/GCA_000381105.1_ASM38110v1	-	ALE12
Bacteroides sp. An19	1965580	PRJNA377666	377666	FCB group	Bacteroidetes/Chlorobi group	4.73308	45.9	-	NFKD01	156	4183	3938	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473653	GCA_002160215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/215/GCA_002160215.1_ASM216021v1	-	An19
Prochlorococcus sp. W10	613201	PRJNA169367	169367	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.561998	30.8	-	ALPH01	349	-	-	8/20/12	7/29/15	Contig	Massachusetts Institute of Technology	SAMN02470451	GCA_000291845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/845/GCA_000291845.1_ProW10_v1.0	22895163	-
Actinomyces sp. ph3	1118058	PRJEA82081	82081	Terrabacteria group	Actinobacteria	1.86418	56	-	CAGY01	10	1652	1584	5/30/12	4/8/17	Contig	URMITE CNRS UMR 6236 IRD 198	SAMEA2272301	GCA_000308055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/055/GCA_000308055.1_ASM30805v1	-	-
Campylobacter sp. BCW_6875	1903288	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.73705	30.4	-	MJWU01	40	1814	1673	10/4/16	4/13/17	Scaffold	University of California at Davis	SAMN03360222	GCA_001762405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/405/GCA_001762405.1_ASM176240v1	-	BCW_6875
Neisseria sp. HMSC055H02	1739411	PRJNA300061	300061	Proteobacteria	Betaproteobacteria	2.41968	51.2	-	LTWU01	81	2396	2165	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480068	GCA_001813335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/335/GCA_001813335.1_ASM181333v1	-	HMSC055H02
Sphingobacterium sp. UBA3964	1947497	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.11143	39.8	-	DGDA01	88	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454025	GCA_002385185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/185/GCA_002385185.1_ASM238518v1	28894102	-
Rothia sp. HMSC061D12	1715161	PRJNA296289	296289	Terrabacteria group	Actinobacteria	2.33654	59.6	-	LTQJ01	13	1846	1771	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498645	GCA_001836735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/735/GCA_001836735.1_ASM183673v1	-	HMSC061D12
Sphingobium sp. 66-54	1895845	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	3.99611	65.6	-	MKWI01	38	3817	3709	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660629	GCA_001899715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/715/GCA_001899715.1_ASM189971v1	-	-
Halomonas sp. QHL1	1123773	PRJNA329581	329581	Proteobacteria	Gammaproteobacteria	4.15534	54.6	-	MINL01	5	3799	3635	11/17/16	4/16/17	Scaffold	Qinghai University Medical College	SAMN05415087	GCA_001882345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/345/GCA_001882345.1_ASM188234v1	-	QHL1
Rhizobium sp. Root482	1736543	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	5.26075	61.5	-	LMFA01	26	5074	4879	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155812	GCA_001426565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/565/GCA_001426565.1_Root482	26633631	Root482
Methylophaga sp. UBA3595	1946886	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.18944	44.2	-	DFMK01	76	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453351	GCA_002375655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/655/GCA_002375655.1_ASM237565v1	28894102	-
Chryseobacterium sp. CCH4-E10	1768758	PRJNA299404	299404	FCB group	Bacteroidetes/Chlorobi group	4.39635	36.6	-	LSIL01	383	3962	3802	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299436	GCA_001556235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/235/GCA_001556235.1_ASM155623v1	-	CCH4-E10
Mesorhizobium sp. LNJC391B00	1287273	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.38973	62.6	-	AYWI01	44	6279	5862	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359672	GCA_000502535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/535/GCA_000502535.1_Mloti_LNJC391B00	-	LNJC391B00
Variovorax sp. JGI 0001020-D06	1286835	PRJNA187228	187228	Proteobacteria	Betaproteobacteria	0.267607	64.7	-	AXXD01	33	-	-	10/25/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441093	GCA_000482965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/965/GCA_000482965.1_ASM48296v1	-	JGI 0001020-D06
Xanthomonas translucens	343	PRJNA302486	302486	Proteobacteria	Gammaproteobacteria	4.67562	68.1	-	LNVT01	117	4011	3676	12/8/15	4/5/17	Scaffold	Kansas State University	SAMN04279069	GCA_001462155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/155/GCA_001462155.1_ASM146215v1	-	XT5523
Hyphomonas sp. UBA4508	1946633	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.58626	57.8	-	DGMW01	47	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455766	GCA_002388625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/625/GCA_002388625.1_ASM238862v1	28894102	-
Microbacterium sp. Cr-K32	1452535	PRJNA236112	236112	Terrabacteria group	Actinobacteria	3.8654	68.3	-	JARD01	30	3696	3587	6/16/14	4/9/17	Contig	Central Michigan University	SAMN02594834	GCA_000708345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/345/GCA_000708345.1_Cr-K32	-	Cr-K32
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.7866	58.8	-	LNXF01	63	4593	4448	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339870	GCA_001681845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/845/GCA_001681845.1_ASM168184v1	-	S1923
Streptomyces rimosus subsp. rimosus	132474	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.36449	71.8	-	JNXX01	5743	-	-	7/1/14	7/1/14	Contig	University of Illinois	SAMN02645298	GCA_000717145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/145/GCA_000717145.2_ASM71714v2	-	NRRL B-2659
Butyrivibrio sp. INlla16	1520807	PRJEB16262	348874	Terrabacteria group	Firmicutes	4.79934	41.7	-	FMYB01	133	4454	4232	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910263	GCA_900104155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/155/GCA_900104155.1_IMG-taxon_2593339137_annotated_assembly	-	INlla16
Sphingopyxis sp. YR583	1881047	PRJEB16700	350422	Proteobacteria	Alphaproteobacteria	4.3121	64	-	FNWK01	5	4050	3958	10/27/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428974	GCA_900108295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/295/GCA_900108295.1_IMG-taxon_2687453811_annotated_assembly	-	YR583
[Haemophilus] ducreyi	730	PRJNA318024	318024	Proteobacteria	Gammaproteobacteria	1.66748	38.1	chromosome:NZ_CP015428.1/CP015428.1	-	1	1645	1481	5/19/16	4/5/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04632443	GCA_001647795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/795/GCA_001647795.1_ASM164779v1	-	VAN5
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.39223	34.7	-	LZHJ01	163	2429	2160	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179611	GCA_001690815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/815/GCA_001690815.1_ASM169081v1	-	GillExp13
Chlamydia suis	83559	PRJEB17986	379679	PVC group	Chlamydiae	1.04549	42.2	-	FSSF01	344	-	-	3/18/17	3/18/17	Contig	Functional Genomics Genter Zurich	SAMEA4555946	GCA_900149375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/375/GCA_900149375.1_19-23b	-	-
Salinivibrio sp. PR932	1909492	PRJNA368805	368805	Proteobacteria	Gammaproteobacteria	3.49726	49.9	-	MUFM01	74	3224	3088	2/14/17	2/22/17	Scaffold	Universidad de Sevilla	SAMN06273034	GCA_001996125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/125/GCA_001996125.1_ASM199612v1	-	PR932
Klebsiella michiganensis	1134687	PRJNA352878	352878	Proteobacteria	Gammaproteobacteria	6.20834	55.7	-	MPJL01	120	6099	5728	5/9/17	5/22/17	Contig	Universidad Nacional Mayor de San Marcos	SAMN06006480	GCA_002119875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/875/GCA_002119875.1_ASM211987v1	-	3T412C
Achromobacter sp. 2789STDY5608622	1806489	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	6.77697	67.5	-	CYTN01	36	6262	6052	9/19/15	4/11/17	Scaffold	SC	SAMEA2247587	GCA_001299095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/095/GCA_001299095.1_11861_6_16	-	2789STDY5608622
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.61838	51.1	-	MPQM01	54	2567	2461	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016259	GCA_002020545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/545/GCA_002020545.1_ASM202054v1	-	-
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79585	32.3	-	FQKY01	15	2797	2622	11/23/16	4/6/17	Contig	SC	SAMEA3449112	GCA_900126815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/815/GCA_900126815.1_17175_3_56	-	3688STDY6125110
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.81399	57.2	-	NFXD01	137	6029	5666	6/9/17	6/12/17	Contig	JCVI	SAMN05960934	GCA_002188025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/025/GCA_002188025.1_ASM218802v1	-	G4593
Proteiniphilum sp. UBA4842	1947255	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.35113	41.5	-	DHEU01	149	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452755	GCA_002400045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/400/045/GCA_002400045.1_ASM240004v1	28894102	-
Burkholderia territorii	1503055	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.10185	66.4	-	LPMW01	153	6588	6248	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449683	GCA_001534365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/365/GCA_001534365.1_ASM153436v1	-	MSMB1474WGS
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.79446	67.5	-	LPKY01	122	7100	6706	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449631	GCA_001532995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/995/GCA_001532995.1_ASM153299v1	-	MSMB719WGS
Xanthomonas axonopodis pv. manihotis str. IBSBF 2822	1185690	PRJNA163775	163775	Proteobacteria	Gammaproteobacteria	4.83135	65.1	-	AKDV01	464	4475	3879	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090326	GCA_000266185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/185/GCA_000266185.1_IBSBF2822	22699502	IBSBF 2822
Xanthomonas axonopodis pv. manihotis str. IBSBF 285	1185691	PRJNA163777	163777	Proteobacteria	Gammaproteobacteria	4.97205	65	-	AKDW01	147	4437	4100	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090327	GCA_000266205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/205/GCA_000266205.1_IBSBF285	22699502	IBSBF 285
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.5246	67.7	-	LPKO01	96	6854	6503	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449621	GCA_001533025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/025/GCA_001533025.1_ASM153302v1	-	MSMB654WGS
Burkholderia territorii	1503055	PRJNA369256	369256	Proteobacteria	Betaproteobacteria	8.86575	66.4	-	MUZF01	261	8468	8047	5/19/17	5/19/17	Scaffold	University of Florida	SAMN06282495	GCA_002151255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/255/GCA_002151255.1_ASM215125v1	-	A63
Klebsiella quasipneumoniae subsp. quasipneumoniae	1667327	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.87378	56.6	-	NFYR01	121	5987	5601	6/9/17	6/12/17	Contig	JCVI	SAMN05960947	GCA_002188215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/215/GCA_002188215.1_ASM218821v1	-	AK_SD_007
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.83453	32.3	-	FQLA01	16	2861	2686	11/24/16	4/6/17	Contig	SC	SAMEA3449113	GCA_900126825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/825/GCA_900126825.1_17175_3_57	-	3688STDY6125111
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.56443	50.9	-	MPQN01	123	2548	2397	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016260	GCA_002020555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/555/GCA_002020555.1_ASM202055v1	-	-
Achromobacter sp. 2789STDY5608618	1806505	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	6.45187	67.8	-	CYTJ01	31	5922	5746	9/19/15	4/11/17	Scaffold	SC	SAMEA2247583	GCA_001299115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/115/GCA_001299115.1_11861_6_12	-	2789STDY5608618
Klebsiella michiganensis	1134687	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	6.44619	54.7	-	NFVT01	134	6387	6030	6/9/17	6/12/17	Contig	JCVI	SAMN05960896	GCA_002186735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/735/GCA_002186735.1_ASM218673v1	-	PO2731
Salinivibrio sp. IB574	1909444	PRJNA368808	368808	Proteobacteria	Gammaproteobacteria	3.61254	49.8	-	MUFN01	69	3388	3181	2/14/17	2/22/17	Scaffold	Universidad de Sevilla	SAMN06273035	GCA_001996205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/205/GCA_001996205.1_ASM199620v1	-	IB574
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.74134	35.2	-	LZGX01	118	2588	2419	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179602	GCA_001690825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/825/GCA_001690825.1_ASM169082v1	-	Fer1-1
Legionella pneumophila subsp. pascullei	91890	PRJNA310003	310003	Proteobacteria	Gammaproteobacteria	3.38509	38.1	chromosome:NZ_CP014255.1/CP014255.1	-	1	3077	2927	3/14/16	3/28/17	Complete Genome	Centers of Disease Control	SAMN04438305	GCA_001590615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/590/615/GCA_001590615.1_ASM159061v1	27151801	F-4185
Sphingopyxis sp. P1IMeth2	1892848	PRJEB21174	397158	Proteobacteria	Alphaproteobacteria	3.88621	64.9	-	FYAT01	19	-	-	8/5/17	8/5/17	Contig	Griffith University	SAMEA104113267	GCA_900185685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/685/GCA_900185685.1_P1IMeth2_assembly_1	-	-
Butyrivibrio sp. ob235	1761780	PRJEB16830	350969	Terrabacteria group	Firmicutes	4.73448	41.6	-	FOBE01	83	4303	4097	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487770	GCA_900109475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/475/GCA_900109475.1_IMG-taxon_2606217762_annotated_assembly	-	OB235
Streptomyces rimosus subsp. pseudoverticillatus	1464079	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.55634	71.4	-	JNXZ01	8884	-	-	7/1/14	7/1/14	Contig	University of Illinois	SAMN02645300	GCA_000717385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/385/GCA_000717385.2_ASM71738v2	-	NRRL B-3698
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.85909	58.9	-	LNXG01	53	4637	4507	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339871	GCA_001681875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/875/GCA_001681875.1_ASM168187v1	-	S2144
Microbacterium sp. Cr-K29	1452534	PRJNA236112	236112	Terrabacteria group	Actinobacteria	3.78918	68.3	-	JARC01	49	3638	3526	6/16/14	4/9/17	Contig	Central Michigan University	SAMN02594835	GCA_000708365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/365/GCA_000708365.1_Cr-K29	-	Cr-K29
Hyphomonas sp. UBA4505	1946632	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.45682	58.4	-	DGMZ01	12	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455774	GCA_002388685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/685/GCA_002388685.1_ASM238868v1	28894102	-
Xanthomonas translucens	343	PRJNA302486	302486	Proteobacteria	Gammaproteobacteria	4.80183	67.6	-	LNTA01	514	4354	3781	1/27/16	4/4/17	Scaffold	Kansas State University	SAMN04279072	GCA_001542045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/045/GCA_001542045.1_ASM154204v1	-	B1
Variovorax sp. JGI 0001011-P21	1286834	PRJNA187227	187227	Proteobacteria	Betaproteobacteria	1.58398	65.8	-	AXXE01	91	-	-	10/25/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441429	GCA_000482985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/985/GCA_000482985.1_ASM48298v1	-	JGI 0001011-P21
Mesorhizobium sp. LNJC394B00	1287274	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.52365	62.6	-	AYWH01	39	6381	5894	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359673	GCA_000502555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/555/GCA_000502555.1_Mloti_LNJC394B00	-	LNJC394B00
Chryseobacterium sp. FP211-J200	1792309	PRJNA310285	310285	FCB group	Bacteroidetes/Chlorobi group	4.11077	37.1	-	LSHB01	83	3896	3755	5/13/16	9/19/17	Contig	Memorial University of Newfoundland	SAMN04449598	GCA_001643375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/375/GCA_001643375.1_ASM164337v1	-	FP211-J200
Methylophaga sp. UBA3593	1946885	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.25105	44.5	-	DFMM01	19	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453353	GCA_002375685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/685/GCA_002375685.1_ASM237568v1	28894102	-
Rhizobium sp. Root708	1736592	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	6.29212	60.3	-	LMHV01	44	6027	5777	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155861	GCA_001429725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/725/GCA_001429725.1_Root708	26633631	Root708
Halomonas sp. BC2	1670449	PRJNA286904	286904	Proteobacteria	Gammaproteobacteria	3.60515	59.5	-	LFGT01	29	3372	2981	4/3/17	4/5/17	Scaffold	Procter & Gamble Company 	SAMN03775324	GCA_002078115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/115/GCA_002078115.1_ASM207811v1	26888357	BC2
Sphingobium sp. 32-64-5	1970430	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.23502	64.1	-	NCDI01	915	2760	2440	8/16/17	8/16/17	Scaffold	None	SAMN06622376	GCA_002280085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/085/GCA_002280085.1_ASM228008v1	-	-
Rothia sp. HMSC062F03	1715153	PRJNA296281	296281	Terrabacteria group	Actinobacteria	2.27194	61.8	-	LTQB01	42	1807	1712	10/25/16	4/18/17	Scaffold	The Genome Institute at Washington University	SAMN04498642	GCA_001836905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/905/GCA_001836905.1_ASM183690v1	-	HMSC062F03
Sphingobacterium sp. UBA4616	1947498	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	5.18157	39.8	-	DGIS01	35	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457689	GCA_002386525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/525/GCA_002386525.1_ASM238652v1	28894102	-
Neisseria sp. HMSC068C12	1739456	PRJNA300106	300106	Proteobacteria	Betaproteobacteria	2.20987	49.2	-	LTVK01	55	2185	2051	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480384	GCA_001814095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/095/GCA_001814095.1_ASM181409v1	-	HMSC068C12
Campylobacter sp. BCW_6876	1903289	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.79836	30.2	-	MJWV01	39	1938	1706	10/4/16	4/21/17	Scaffold	University of California at Davis	SAMN03360223	GCA_001762425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/425/GCA_001762425.1_ASM176242v1	-	BCW_6876
Actinomyces sp. ICM54	936549	PRJNA165951	165951	Terrabacteria group	Actinobacteria	2.35505	65.7	-	JDFI01	94	2063	1966	2/6/14	4/17/17	Contig	JCVI	SAMN02344581	GCA_000565035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/035/GCA_000565035.1_AspICM54v1.0	-	ICM54
Prochlorococcus sp. W2	1203261	PRJNA169371	169371	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.26677	30.5	-	ALPB01	108	-	-	8/20/12	7/29/15	Contig	Massachusetts Institute of Technology	SAMN02470450	GCA_000291885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/885/GCA_000291885.1_ProW2_v1.0	22895163	-
Bacteroides sp. An51A	1965640	PRJNA377666	377666	FCB group	Bacteroidetes/Chlorobi group	4.48644	45.9	-	NFIC01	26	3842	3621	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473732	GCA_002161565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/565/GCA_002161565.1_ASM216156v1	-	An51A
Thioalkalivibrio sp. ALMg2	1265497	PRJNA182455	182455	Proteobacteria	Gammaproteobacteria	2.91856	66	-	ARLI01	54	2844	2645	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441668	GCA_000381145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/145/GCA_000381145.1_ASM38114v1	-	ALMg2
Ruminococcus sp. UNK.MGS-30	1638786	PRJNA277012	277012	Terrabacteria group	Firmicutes	2.95661	50	-	LBCK01	126	-	-	4/24/15	6/10/15	Scaffold	The Mayo Clinic	SAMN03456688	GCA_000980705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/705/GCA_000980705.1_ASM98070v1	26021920	-
Paenibacillus sp. PAMC 26794	1257080	PRJNA179328	179328	Terrabacteria group	Firmicutes	6.65719	46	-	ANHX01	92	5834	5647	11/29/12	5/19/17	Contig	Korea Polar Research Institute	SAMN02470173	GCA_000316035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/035/GCA_000316035.1_Draft_genome_sequence_of_PAMC_26794	23409270	PAMC 26794
Eubacterium sp. 45_250	1897004	PRJNA321218	321218	Terrabacteria group	Firmicutes	2.56684	45	-	MNSK01	39	2293	2197	12/23/16	12/23/16	Scaffold	None	SAMN05717268	GCA_001916415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/415/GCA_001916415.1_ASM191641v1	27819664	-
Psychrobacter sp. UBA2071	1947345	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.77689	43.7	-	DCZZ01	114	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454683	GCA_002332465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/465/GCA_002332465.1_ASM233246v1	28894102	-
Acidovorax sp. SCN 65-108	1660085	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	5.12736	64.6	-	MEDK01	190	4686	4211	9/13/16	9/13/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03652430	GCA_001724055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/055/GCA_001724055.1_ASM172405v1	26031303	-
Erythrobacter sp. 34-65-8	1970335	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	1.99828	65.4	-	NCJP01	422	2248	2070	8/16/17	8/16/17	Scaffold	None	SAMN06622213	GCA_002278985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/985/GCA_002278985.1_ASM227898v1	-	-
Nocardioides sp. REDSEA-S39_B2	1811558	PRJNA289734	289734	Terrabacteria group	Actinobacteria	3.48243	72.2	-	LUPO01	56	-	-	4/22/16	7/27/16	Contig	King Abdullah University of Science and Technology	SAMN04534616	GCA_001627505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/505/GCA_001627505.1_ASM162750v1	27377622	-
Methylobacterium sp. Leaf85	1736241	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	5.14322	67	-	LMME01	35	4810	4621	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151621	GCA_001422125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/125/GCA_001422125.1_Leaf85	26633631	Leaf85
Enterococcus sp. HMSC060D09	1715071	PRJNA296199	296199	Terrabacteria group	Firmicutes	2.97283	37.7	-	LTQR01	306	3066	2891	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498599	GCA_001836575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/575/GCA_001836575.1_ASM183657v1	-	HMSC060D09
Prevotella sp. P5-92	2024222	PRJNA396820	396820	FCB group	Bacteroidetes/Chlorobi group	3.50776	47.6	-	NPJG01	139	2918	2741	8/14/17	8/16/17	Contig	University of Ljubljana	SAMN07431221	GCA_002251245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/245/GCA_002251245.1_ASM225124v1	-	P5-92
Mycobacterium sp. UM_CSW	1370119	PRJNA213250	213250	Terrabacteria group	Actinobacteria	6.39479	67.8	-	AUWQ01	186	6128	5857	8/26/13	4/8/17	Contig	"Universiti Malaya, Kuala Lumpur"	SAMN04287657	GCA_000455205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/205/GCA_000455205.1_Mycobacterium_sp_UM_CSW	27035710	UM_CSW
Pantoea sp. UBA2708	1947028	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.90828	57.7	-	DELA01	22	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06454556	GCA_002354155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/155/GCA_002354155.1_ASM235415v1	28894102	-
Streptococcus sp. HMSC077D04	1715180	PRJNA296308	296308	Terrabacteria group	Firmicutes	2.09417	39.5	-	LTKZ01	116	2039	1868	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477544	GCA_001808785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/785/GCA_001808785.1_ASM180878v1	-	HMSC077D04
Bradyrhizobium sp. ARR65	1040989	PRJNA182742	182742	Proteobacteria	Alphaproteobacteria	8.61387	62	-	AWZU01	139	8126	7603	9/30/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02441123	GCA_000472385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/385/GCA_000472385.1_ASM47238v1	-	ARR65
Arthrobacter sp. Soil736	1736395	PRJNA298127	298127	Terrabacteria group	Actinobacteria	5.88713	65.4	-	LMSB01	74	5470	5064	11/2/15	4/11/17	Scaffold	ETH Zurich	SAMN04155660	GCA_001428005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/005/GCA_001428005.1_Soil736	26633631	Soil736
Corynebacterium sp. HMSC05H05	1581119	PRJNA269888	269888	Terrabacteria group	Actinobacteria	2.41162	65.3	-	LWOH01	55	2306	2185	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03433340	GCA_001807265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/265/GCA_001807265.1_ASM180726v1	-	HMSC05H05
Staphylococcus sp. HMSC059E03	1715192	PRJNA296320	296320	Terrabacteria group	Firmicutes	2.68323	35.9	-	LTIH01	50	2591	2505	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477549	GCA_001810185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/185/GCA_001810185.1_ASM181018v1	-	HMSC059E03
Enterobacter sp. MGH 3	1329812	PRJNA201918	201918	Proteobacteria	Gammaproteobacteria	5.16311	55.1	-	JCLU01	21	5080	4790	2/3/14	4/10/17	Scaffold	Broad Institute	SAMN02138543	GCA_000534755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/755/GCA_000534755.1_Ente_cloa_complex_MGH_3_V2	-	MGH 3
Rhodococcus sp. 4J2A2	861270	PRJEB8446	280823	Terrabacteria group	Actinobacteria	6.44465	61.8	-	CEDU01	60	5988	5762	4/10/15	8/1/17	Contig	University of Granada	SAMEA3249415	GCA_001373455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/455/GCA_001373455.1_Rhodococcus_sp._4J2A2	-	4J2A2
Synechococcus sp. CB0205	232363	PRJNA46503	46503	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.42731	63	-	ADXM01	78	2644	2501	6/22/10	4/17/17	Contig	Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN00010406	GCA_000179255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/255/GCA_000179255.1_ASM17925v1	-	CB0205
Sphingomonas sp. KC8	1030157	PRJNA67131	67131	Proteobacteria	Alphaproteobacteria	4.07426	63.7	-	AFMP01	70	3911	3772	5/20/11	4/17/17	Contig	"Key Lab of Urban Environment and Health, Institute of Urban Environment, Chinese Academy of Sciences"	SAMN02470047	GCA_000214335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/335/GCA_000214335.2_ASM21433v1	21685282	KC8
Clostridium sp. Marseille-P2415	1805471	PRJEB18751	359778	Terrabacteria group	Firmicutes	5.24787	44.9	-	FTLN01	9	4807	4516	2/8/17	4/17/17	Scaffold	URMITE	SAMEA47482918	GCA_900155545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/545/GCA_900155545.1_PRJEB18751	-	Marseille-P2415
Bacillus sp. NSP2.1	1071072	PRJNA209223	209223	Terrabacteria group	Firmicutes	5.52153	53.9	-	AVBJ01	25	5334	5010	9/24/13	4/6/17	Scaffold	Directorate of Groundnut Research (Indian Council of Agricultural Research)	SAMN02469742	GCA_000470975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/975/GCA_000470975.1_GS_De_Novo_Assembly	24158559	-
[Flexibacter] sp. ATCC 35103	1937528	PRJNA360555	360555	FCB group	Bacteroidetes/Chlorobi group	5.68181	33.5	-	MTQF01	30	4671	4554	1/31/17	4/17/17	Scaffold	McMaster University	SAMN06249474	GCA_001975985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/985/GCA_001975985.1_ASM197598v1	-	ATCC 35103
Klebsiella sp. NFIX25	1566173	PRJEB16620	349949	Proteobacteria	Gammaproteobacteria	5.2823	58.1	-	FNPY01	20	5215	4972	10/22/16	7/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159478	GCA_900107425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/425/GCA_900107425.1_IMG-taxon_2602042105_annotated_assembly	-	NFIX25
Acinetobacter sp. CIP 64.2	1217694	PRJNA183233	183233	Proteobacteria	Gammaproteobacteria	4.04914	41.4	-	APRT01	9	3888	3649	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01087858	GCA_000369645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/645/GCA_000369645.1_Acin_sp_CIP_64_2_V1	-	CIP 64.2
Paeniclostridium sordellii	1505	PRJEB8153	277677	Terrabacteria group	Firmicutes	3.52429	27.3	-	CDNM01	35	3438	3340	3/13/15	4/4/17	Contig	WTSI	SAMEA1572076	GCA_001372935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/935/GCA_001372935.1_UMC1	-	UMC1
Streptomyces sp. AA4	591158	PRJNA33599	33599	Terrabacteria group	Actinobacteria	9.17567	69.7	-	ACEV01	4	8528	8218	2/26/09	5/19/17	Scaffold	Broad Institute	SAMN02595297	GCA_000158875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/875/GCA_000158875.1_ASM15887v1	-	AA4
Pseudomonas sp. 2_1_26	665948	PRJNA40037	40037	Proteobacteria	Gammaproteobacteria	6.44748	66.1	-	ACWU01	51	6207	5773	10/31/11	5/19/17	Scaffold	Broad Institute	SAMN02463803	GCA_000233495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/495/GCA_000233495.1_Pseudomonas_sp_2_1_26_V1	-	2_1_26
Elizabethkingia anophelis	1117645	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	3.84337	35.6	-	MAHO01	23	3548	3447	3/8/17	3/10/17	Contig	CDC	SAMN05275358	GCA_002023645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/645/GCA_002023645.1_ASM202364v1	-	CSID_3015183679
Salinispora pacifica CNS103	1137262	PRJNA169787	169787	Terrabacteria group	Actinobacteria	5.58437	69.8	-	AZWP01	122	5240	4825	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597246	GCA_000514795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/795/GCA_000514795.1_ASM51479v1	-	CNS103
Mycobacterium chelonae	1774	PRJNA323571	323571	Terrabacteria group	Actinobacteria	5.18107	64.1	-	MAFM01	77	5128	4965	3/3/17	3/6/17	Contig	LNCC	SAMN05186793	GCA_002013535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/535/GCA_002013535.1_ASM201353v1	-	D16R20
Streptococcus sobrinus TCI-381	1074085	PRJNA71937	71937	Terrabacteria group	Firmicutes	2.12812	43.4	-	AGHH01	396	2151	1895	10/6/11	3/30/17	Contig	JCVI	SAMN02436623	GCA_000228425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/425/GCA_000228425.2_SMUT2-NEX_25-381	-	TCI-381
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.69065	66.5	-	LOUO01	138	8062	7614	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449176	GCA_001522965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/965/GCA_001522965.1_ASM152296v1	-	INT3-BP156
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96521	64.1	-	FVFU01	14	4907	4748	3/10/17	3/18/17	Contig	SC	SAMEA2068816	GCA_900132715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/715/GCA_900132715.1_10250_1_2	-	342
Aeromonas veronii	654	PRJNA296464	296464	Proteobacteria	Gammaproteobacteria	4.67964	58.6	-	LKKD01	48	4340	4119	11/19/15	4/4/17	Scaffold	Texas Tech University	SAMN04099664	GCA_001446795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/795/GCA_001446795.1_ASM144679v1	26824353	TTU2014-141AME
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.35288	55	-	LAAA01	94	5321	5057	3/19/15	4/6/17	Contig	JCVI	SAMN03283616	GCA_000957715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/715/GCA_000957715.1_ASM95771v1	-	35005
Xanthomonas perforans	442694	PRJNA276690	276690	Proteobacteria	Gammaproteobacteria	5.33568	64.6	-	JZWC01	259	4782	4443	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03379916	GCA_001010105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/105/GCA_001010105.1_ASM101010v1	26089818	TB15
Streptococcus pseudopneumoniae	257758	PRJNA302716	302716	Terrabacteria group	Firmicutes	2.17752	39.8	-	MUXR01	89	2335	2015	3/3/17	3/15/17	Scaffold	TAILORED-Treatment project	SAMN06302302	GCA_002014955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/955/GCA_002014955.1_ASM201495v1	-	CCUG 63747
Kingella kingae KK158	1348241	PRJEB4189	209623	Proteobacteria	Betaproteobacteria	1.99281	46.6	-	CBRV01	1	1902	1622	8/28/13	4/2/17	Scaffold	URMITE	SAMEA2272610	GCA_000470635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/635/GCA_000470635.1_G113	-	KK158
Vibrio anguillarum	55601	PRJNA283572	283572	Proteobacteria	Gammaproteobacteria	4.14273	44.5952	chromosome I:CP011438.1; chromosome II:CP011439.1; plasmid pJM1:CP016267.1	-	3	3611	3470	2/7/17	2/7/17	Chromosome	University of Copenhagen	SAMN03652808	GCA_001990125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/125/GCA_001990125.1_ASM199012v1	-	VIB 93
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.01564	55	-	JWRO01	4	4978	4696	12/24/14	3/25/17	Contig	JCVI	SAMN03012816	GCA_000807735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/735/GCA_000807735.1_ASM80773v1	-	NDA
Citrobacter freundii GTC 09479	1288347	PRJNA187423	187423	Proteobacteria	Gammaproteobacteria	4.89958	51.6	-	AOMS01	31	4813	4599	2/28/13	5/18/17	Contig	"Institute of Microbial Technology (IMTECH), Chandigarh, India 160036"	SAMN02469850	GCA_000342325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/325/GCA_000342325.1_Whole_genome_assembly	-	GTC 09479
Leptospira santarosai serovar Grippotyphosa	1933030	PRJNA360567	360567	Spirochaetes	Spirochaetia	4.09893	41.8	-	MTST01	60	4015	3668	2/1/17	4/6/17	Contig	School of Veterinary Medicine and Animal Science / University of Sao Paulo	SAMN06212383	GCA_001981455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/455/GCA_001981455.1_ASM198145v1	-	M72/6-6
Acinetobacter pittii	48296	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.86365	38.8	-	LLGZ01	297	3772	3582	10/27/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145717	GCA_001415555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/555/GCA_001415555.1_ASM141555v1	-	ABBL098
Xanthomonas euvesicatoria	456327	PRJNA275490	275490	Proteobacteria	Gammaproteobacteria	5.43164	64.4	-	JZLR01	279	4893	4469	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03349324	GCA_001008995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/995/GCA_001008995.1_v1	26089818	354
Pseudomonas amygdali pv. aesculi	251722	PRJNA287460	287460	Proteobacteria	Gammaproteobacteria	6.23144	58.3	-	LILI01	286	6070	5386	1/25/16	4/4/17	Contig	University of Edinburgh	SAMN03991891	GCA_001537985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/985/GCA_001537985.1_ASM153798v1	27145446	2306
Brucella sp. CMUL 029	1912100	PRJNA349259	349259	Proteobacteria	Alphaproteobacteria	3.29391	57.2	-	MNBO01	38	3366	3135	1/6/17	4/16/17	Contig	LAU	SAMN05929593	GCA_001938175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/175/GCA_001938175.1_ASM193817v1	-	CMUL 029
Enterobacter asburiae	61645	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.06752	55.6	-	LRJQ01	106	5070	4790	1/22/16	4/4/17	Contig	JCVI	SAMN04430996	GCA_001525055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/055/GCA_001525055.1_ASM152505v1	-	SMART_1470
Legionella pneumophila subsp. pascullei	91890	PRJNA310003	310003	Proteobacteria	Gammaproteobacteria	3.37664	38.1	chromosome:NZ_CP014257.1/CP014257.1	-	1	3069	2924	3/14/16	3/28/17	Complete Genome	Centers of Disease Control	SAMN04438273	GCA_001590695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/590/695/GCA_001590695.1_ASM159069v1	27151801	D-7119
Vibrio alginolyticus	663	PRJNA382465	382465	Proteobacteria	Gammaproteobacteria	5.14776	44.5	-	NCXR01	39	4766	4618	4/28/17	5/3/17	Scaffold	"First Institution of Oceanography,SOA"	SAMN06706663	GCA_002114195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/195/GCA_002114195.1_ASM211419v1	-	QD-5
Pseudoalteromonas sp. P1-25	1723758	PRJNA294442	294442	Proteobacteria	Gammaproteobacteria	4.39956	40.7	-	LKDW01	163	3925	3806	10/21/15	4/11/17	Contig	Hans Knoell Institute	SAMN04026661	GCA_001401805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/805/GCA_001401805.1_ASM140180v1	26679587	P1-25
Enterococcus faecium	1352	PRJEB12395	310574	Terrabacteria group	Firmicutes	2.61465	38.1	chromosome I:NZ_LN999844.1/LN999844.1	-	1	2647	2465	2/2/16	3/27/17	Complete Genome	"Institute of Biotechnology, Univerity of Helsinki"	SAMEA3726417	GCA_900066025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/025/GCA_900066025.1_Enterococcus_faecium_E1002_isolate	-	-
Streptococcus oralis	1303	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.03434	41.1	-	JVYP01	79	2007	1916	7/10/15	4/3/17	Contig	University of Washington	SAMN03197175	GCA_001070335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/335/GCA_001070335.1_ASM107033v1	26230489	1212_SMIT
Acinetobacter nosocomialis	106654	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.93222	38.7	-	LYKW01	56	3728	3576	11/2/16	4/5/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745402	GCA_001863655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/655/GCA_001863655.1_ASM186365v1	-	XH551
Klebsiella variicola	244366	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.54465	57.3	-	NLDD01	117	5502	5213	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07251798	GCA_002262695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/695/GCA_002262695.1_ASM226269v1	-	L18
Rhodococcus hoagii	43767	PRJNA316970	316970	Terrabacteria group	Actinobacteria	5.34894	68.7	-	LWIB01	34	4976	4851	4/18/17	6/6/17	Contig	The University of Edinburgh	SAMN04632340	GCA_002095255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/255/GCA_002095255.1_ASM209525v1	27638249	PAM1557
Staphylococcus capitis	29388	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.54248	32.8	-	JUZV01	57	2428	2350	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197819	GCA_001073565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/565/GCA_001073565.1_ASM107356v1	26230489	619_SEPI
Staphylococcus hominis	1290	PRJNA327386	327386	Terrabacteria group	Firmicutes	2.21186	31.4	-	MAYR01	14	2236	2097	7/21/16	4/5/17	Scaffold	Oklahoma State University	SAMN05332129	GCA_001691635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/635/GCA_001691635.1_ASM169163v1	-	Hudgins
Lactobacillus paracasei subsp. paracasei Lpp37	1256210	PRJNA178438	178438	Terrabacteria group	Firmicutes	2.97845	46.3	-	ANKG01	264	3189	2864	6/11/13	4/1/17	Contig	Danone Research	SAMN02469718	GCA_000410415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/415/GCA_000410415.1_ASM41041v1	23894338	Lpp37
Gardnerella vaginalis 00703C2mash	698959	PRJNA42451	42451	Terrabacteria group	Actinobacteria	1.54668	42.3	-	ADEU01	22	1298	1178	5/21/12	3/30/17	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393782	GCA_000263515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/515/GCA_000263515.1_ASM26351v1	-	00703C2mash
Aggregatibacter actinomycetemcomitans serotype a str. A160	1167007	PRJNA91101	91101	Proteobacteria	Gammaproteobacteria	2.25683	44.3	-	AJME02	118	2270	2056	1/24/13	4/4/17	Scaffold	"Bumgarner laboratory, Department of Microbiology, University of Washington"	SAMN02471981	GCA_000332915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/915/GCA_000332915.2_AaA160v2.0	23194436	A160
Lactobacillus crispatus	47770	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.04684	36.9	-	LYQW01	49	2093	1882	7/14/17	7/17/17	Scaffold	University of Minnesota	SAMN04498978	GCA_002218695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/695/GCA_002218695.1_ASM221869v1	-	UMNLC6
Pectobacterium carotovorum subsp. brasiliense	180957	PRJNA269227	269227	Proteobacteria	Gammaproteobacteria	4.81548	51.9	-	JUJK01	27	4413	4214	12/29/14	4/2/17	Scaffold	Beijing Academy of Agriculture and Forestry Sciences	SAMN03252606	GCA_000808245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/245/GCA_000808245.1_ASM80824v1	-	YC D29
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.70917	47.6	-	MEBV01	53	3414	3261	11/18/16	4/5/17	Contig	The University of Queensland	SAMN05200560	GCA_001883225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/225/GCA_001883225.1_ASM188322v1	-	AHL4
Escherichia albertii	208962	PRJDB3047	301492	Proteobacteria	Gammaproteobacteria	4.78059	49.5	-	BBWD01	111	4897	4540	11/6/15	2/25/17	Scaffold	University of Miyazaki	SAMD00026642	GCA_001515065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/065/GCA_001515065.1_ASM151506v1	26537224	KU20110014
Flavobacterium psychrophilum	96345	PRJEB21067	396411	FCB group	Bacteroidetes/Chlorobi group	2.70751	32.3	-	FYCD01	49	2454	2361	7/29/17	8/7/17	Contig	INRA	SAMEA104125234	GCA_900186405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/405/GCA_900186405.1_FPDK001_V1	-	DK001
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.86907	66.9	-	LOVQ01	287	7155	6655	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449207	GCA_001523825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/825/GCA_001523825.1_ASM152382v1	-	MSMB1190
Aeromonas hydrophila	644	PRJNA301651	301651	Proteobacteria	Gammaproteobacteria	5.08731	60.8	-	LNUR01	16	4755	4552	1/25/16	4/4/17	Contig	Mississippi State University	SAMN04253181	GCA_001535585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/585/GCA_001535585.1_ASM153558v1	27231367	TN-97-08
Pseudomonas stutzeri	316	PRJNA338661	338661	Proteobacteria	Gammaproteobacteria	4.58087	64.1	-	MDGV01	16	4295	4186	8/16/16	4/5/17	Scaffold	New Mexico State University	SAMN05560417	GCA_001705635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/635/GCA_001705635.1_ASM170563v1	-	AR9-4
Vibrio sp. J2-31	1507980	PRJEB5892	284698	Proteobacteria	Gammaproteobacteria	5.65995	44.5	-	CCKO01	63	5024	4908	5/20/15	4/10/17	Contig	STATION BIOLOGIQUE DE ROSCOFF	SAMEA2594034	GCA_001048635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/635/GCA_001048635.1_VRSK14v1_PRJEB5892	-	J2-31
Staphylococcus saprophyticus	29385	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.56226	33	-	LMZN01	34	2523	2366	9/28/16	4/5/17	Scaffold	Tufts University	SAMN04244246	GCA_001747545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/545/GCA_001747545.1_ASM174754v1	-	3751
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.25198	36.7	-	LPSC01	43	2374	2221	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305163	GCA_001560465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/465/GCA_001560465.1_NG05B_C06_06	-	NG05B_C06_06
Bifidobacterium breve	1685	PRJDB4597	325619	Terrabacteria group	Actinobacteria	2.38763	58.8	-	BCXT01	62	2100	1881	6/10/16	4/5/17	Contig	Yakult Central Institute	SAMD00047604	GCA_001685865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/865/GCA_001685865.1_ASM168586v1	27340092	BR-A29
Mycobacterium abscessus M94	1158135	PRJNA88149	88149	Terrabacteria group	Actinobacteria	5.09011	64.1	-	AJGG01	82	5158	4833	3/30/12	3/18/17	Contig	"Universiti Malaya, Kuala Lumpur"	SAMN02471416	GCA_000257245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/245/GCA_000257245.2_ASM25724v2	23012295	M94
Moraxella catarrhalis	480	PRJNA297370	297370	Proteobacteria	Gammaproteobacteria	2.09162	41.4	-	LXHU01	42	2022	1797	6/3/16	4/10/17	Contig	Drexel University College of Medicine	SAMN04122789	GCA_001656415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/415/GCA_001656415.1_ASM165641v1	26912404	C10
Lactobacillus salivarius	1624	PRJNA321782	321782	Terrabacteria group	Firmicutes	2.03485	32.7	-	LXZB01	100	2003	1863	9/12/17	9/14/17	Contig	Seoul National University	SAMN05003809	GCA_002289865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/865/GCA_002289865.1_ASM228986v1	-	KLW006
Klebsiella oxytoca	571	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.01737	55	-	JVKR01	242	5777	5503	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197537	GCA_001054935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/935/GCA_001054935.1_ASM105493v1	26230489	346_KOXY
Cronobacter sakazakii 2151	1159489	PRJNA89093	89093	Proteobacteria	Gammaproteobacteria	4.38275	57	-	AJKT01	60	4196	4010	6/7/13	4/1/17	Contig	Cronobacter sakazakii Genome Sequencing Consortium	SAMN02952927	GCA_000409265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/265/GCA_000409265.1_Csak_2151_final_contigs	23724777	2151
Enterobacter cloacae BWH 31	1329845	PRJNA201971	201971	Proteobacteria	Gammaproteobacteria	5.20487	55.5	-	AYIP01	11	5173	4857	10/30/13	3/24/17	Scaffold	Broad Institute	SAMN02138596	GCA_000492675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/675/GCA_000492675.1_Ente_cloa_BWH_31_V1	-	BWH 31
Proteus mirabilis	584	PRJNA308382	308382	Proteobacteria	Gammaproteobacteria	4.15167	38.7	-	LQNO01	92	3913	3681	4/8/16	4/5/17	Contig	"Zhongshan School of Medicine, Sun Yat-sen University"	SAMN04395120	GCA_001617305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/305/GCA_001617305.1_ASM161730v1	-	GB11
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.54588	32.7	-	CUGD01	109	2536	2423	3/31/15	3/26/17	Contig	SC	SAMEA1035086	GCA_001228285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/285/GCA_001228285.1_7068_7_36	-	127925
Propionibacterium acnes HL005PA1	765096	PRJNA49225	49225	Terrabacteria group	Actinobacteria	2.51713	60.2	-	ADZP01	49	2557	2413	7/29/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189194	GCA_000144305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/305/GCA_000144305.1_ASM14430v1	-	HL005PA1
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.9119	66.8	-	LPCQ01	308	6495	6032	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449408	GCA_001528565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/565/GCA_001528565.1_ASM152856v1	-	AU26564
Burkholderia sp. WSM2230	944435	PRJNA165309	165309	Proteobacteria	Betaproteobacteria	6.3098	63.1	-	AXAJ01	33	5630	5444	9/30/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440786	GCA_000472445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/445/GCA_000472445.1_ASM47244v1	-	WSM2230
Campylobacter coli 2680	887317	PRJNA52771	52771	Proteobacteria	delta/epsilon subdivisions	1.6969	31.3	-	AIMN01	128	1793	1702	3/16/12	3/15/17	Contig	Cornell University	SAMN02429055	GCA_000253515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/515/GCA_000253515.2_ASM25351v2	-	2680
Lactobacillus brevis	1580	PRJNA264952	264952	Terrabacteria group	Firmicutes	2.54065	46	-	JXUG01	33	2513	2110	2/6/15	4/10/17	Scaffold	Technische Universitaet Muenchen	SAMN03144672	GCA_000833395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/395/GCA_000833395.1_ASM83339v1	-	TMW 1.465
Mannheimia haemolytica	75985	PRJNA181191	181191	Proteobacteria	Gammaproteobacteria	2.52035	41	-	LFYE01	105	2577	2406	3/23/16	4/5/17	Contig	Agriculture and Agri-Food Canada	SAMN03840636	GCA_001596735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/735/GCA_001596735.1_ASM159673v1	26926339	3927A
Listeria monocytogenes	1639	PRJNA258242	258242	Terrabacteria group	Firmicutes	2.9185	38.1	chromosome:NZ_CP009242.1/CP009242.1	-	1	2992	2867	7/30/15	2/27/17	Complete Genome	Institute of Preventive Veterinary Medicine	SAMN02997429	GCA_001188655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/655/GCA_001188655.1_ASM118865v1	-	LM850658
Serratia marcescens LCT-SM166	1348336	PRJNA208978	208978	Proteobacteria	Gammaproteobacteria	5.07002	59.6	-	ATJW01	13	4760	4614	7/30/13	4/10/17	Scaffold	BGI	SAMN02469358	GCA_000442455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/455/GCA_000442455.1_S.marcescens_LCT-SM166	24526644	LCT-SM166
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.16705	40	-	FPIM01	12	1064	956	5/10/17	5/24/17	Scaffold	WTSI	SAMEA1527865	GCA_900118755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/755/GCA_900118755.1_5965_6_9	-	S1523
Leuconostoc mesenteroides subsp. cremoris	33965	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.63644	38.3	-	MPEC01	219	1761	1406	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981475	GCA_002092465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/465/GCA_002092465.1_ASM209246v1	28217118	LMGCF13
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.02887	41.6	-	JJPH01	142	3466	3262	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708947	GCA_000979585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/585/GCA_000979585.1_gtlEnvA5udCFS	25756680	3.F.A.2.7
Yersinia enterocolitica subsp. palearctica YE-150	1329366	PRJNA200685	200685	Proteobacteria	Gammaproteobacteria	4.46417	46.9	-	ASHW01	96	4225	3888	5/28/13	3/24/17	Contig	Max von Pettenkofer-Institut	SAMN02403950	GCA_000401995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/995/GCA_000401995.1_YE-150_1.0	23846271	YE-150
Listeria monocytogenes	1639	PRJNA243264	243264	Terrabacteria group	Firmicutes	2.89659	38.1	chromosome:NZ_CP007687.1/CP007687.1	-	1	2957	2840	6/3/15	2/27/17	Complete Genome	Cornell University	SAMN02713648	GCA_001027125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/125/GCA_001027125.1_ASM102712v1	-	L2625
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.39096	53.5	-	MLBI01	36	2337	2117	10/13/16	8/3/17	Contig	Institute for Medical Research	SAMN05877645	GCA_001832945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/945/GCA_001832945.1_ASM183294v1	28254972	c122
Sinorhizobium meliloti	382	PRJNA277996	277996	Proteobacteria	Alphaproteobacteria	6.90584	62	-	JZXD01	196	6929	6288	4/2/15	4/3/17	Contig	Monash University Malaysia	SAMN03401073	GCA_000968555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/555/GCA_000968555.1_Rmel_L5_30_v1	-	L5-30
Bordetella bronchiseptica RB630	1331243	PRJNA202155	202155	Proteobacteria	Betaproteobacteria	5.31268	68.1	-	JGYA01	48	5069	4935	5/12/14	4/2/17	Contig	JCVI	SAMN02231292	GCA_000689995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/995/GCA_000689995.1_gbb47v01	25908122	RB630
Listeria monocytogenes	1639	PRJNA276441	276441	Terrabacteria group	Firmicutes	2.91164	38.1	chromosome:NZ_CP011004.1/CP011004.1	-	1	2935	2818	3/11/15	2/27/17	Complete Genome	"University of Zurich, Vetsuisse Faculty"	SAMN03372633	GCA_000950775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/775/GCA_000950775.1_ASM95077v1	26021930	N2306
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31061	57.2359	chromosome 1:NZ_CP018502.1/CP018502.1; chromosome 2:NZ_CP018503.1/CP018503.1	-	2	3372	3120	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932985	GCA_002191415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/415/GCA_002191415.1_ASM219141v1	28388689	BwIM_MAR_25
Lactobacillus rhamnosus L34	1390384	PRJNA217081	217081	Terrabacteria group	Firmicutes	2.93772	46.8	-	AYTR01	51	2983	2778	11/17/14	4/2/17	Contig	Baylor College of Medicine	SAMN02324555	GCA_000784375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/375/GCA_000784375.1_L34	25197459	L34
Pasteurella multocida subsp. multocida	44283	PRJNA244097	244097	Proteobacteria	Gammaproteobacteria	2.34875	40.3	-	JQAI01	27	2236	2154	6/14/15	4/3/17	Contig	Murdoch University	SAMN02721612	GCA_001027685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/685/GCA_001027685.1_ASM102768v1	26151935	V1
[Haemophilus] parasuis	738	PRJNA301181	301181	Proteobacteria	Gammaproteobacteria	2.19334	39.9	-	MNAZ01	123	2130	1932	1/6/17	4/6/17	Scaffold	Chinese Academy of Agricultural Sciences	SAMN04230870	GCA_001938355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/355/GCA_001938355.1_ASM193835v1	-	HPS6
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.08943	41.2	-	CWBN01	81	1991	1826	6/24/15	3/26/17	Contig	SC	SAMEA1032775	GCA_001175425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/425/GCA_001175425.1_6903_4_69	-	EQUI0118
Stenotrophomonas maltophilia	40324	PRJNA272632	272632	Proteobacteria	Gammaproteobacteria	4.39408	66.6	-	LFKU01	33	3935	3766	7/10/15	3/26/17	Contig	The Pennsylvania State University	SAMN03491122	GCA_001051925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/925/GCA_001051925.1_Steno1	26966198	As1
Bacillus amyloliquefaciens Lx-11	1352353	PRJNA209927	209927	Terrabacteria group	Firmicutes	3.88689	46.4	-	AUNG01	39	3842	3670	7/14/15	4/10/17	Contig	"Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences"	SAMN03854673	GCA_001077735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/735/GCA_001077735.1_Lx-11-1.0	-	Lx-11
Bifidobacterium animalis subsp. animalis ATCC 27672	1365959	PRJNA215973	215973	Terrabacteria group	Actinobacteria	1.99016	60.1	-	AWFQ01	10	1668	1530	8/11/15	4/3/17	Scaffold	"Food Science and Technology Institute, Morinaga Milk Industry Co., Ltd"	SAMN03978812	GCA_001264055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/055/GCA_001264055.1_ASM126405v1	26236711	ATCC 27672
Chlamydia psittaci 09DC79	1112270	PRJNA77113	77113	PVC group	Chlamydiae	1.20809	39.3	-	ATMW01	67	1060	982	6/27/13	4/1/17	Scaffold	University of Maryland School of Medicine	SAMN00860219	GCA_000417605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/605/GCA_000417605.1_ASM41760v1	-	09DC79
Enterococcus faecium TX0082	749520	PRJNA47193	47193	Terrabacteria group	Firmicutes	2.69185	37.9	-	AEBU01	130	2785	2638	9/9/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189133	GCA_000148025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/025/GCA_000148025.1_ASM14802v1	-	TX0082
Neisseria gonorrhoeae	485	PRJNA236643	236643	Proteobacteria	Betaproteobacteria	2.151	52.5	-	JFAZ01	120	2467	2163	5/22/14	3/24/17	Contig	Federal Medical and Biological Agency SRI of Physical-Chemical Medicine	SAMN02644626	GCA_000695405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/405/GCA_000695405.1_NG-e03.04	-	e03.04
Streptococcus mutans TCI-179	1074146	PRJNA72037	72037	Terrabacteria group	Firmicutes	1.8182	37	-	AGLE01	126	1848	1741	10/6/11	3/22/17	Contig	JCVI	SAMN02436350	GCA_000229265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/265/GCA_000229265.2_SMUT5-NEX_34-179	-	TCI-179
Borrelia garinii IPT86	1408827	PRJNA223339	223339	Spirochaetes	Spirochaetia	0.974466	27.7	-	AYAC01	640	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378794	GCA_000501635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/635/GCA_000501635.1_BorGarIPT86	-	IPT86
Enterococcus faecalis DAPTO 516	749490	PRJNA47127	47127	Terrabacteria group	Firmicutes	3.0558	37.3	-	AEBS01	79	3140	3006	9/9/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189100	GCA_000147985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/985/GCA_000147985.1_ASM14798v1	-	DAPTO 516
Brucella suis 06-988-1656	1388739	PRJNA217054	217054	Proteobacteria	Alphaproteobacteria	3.32155	57.2	-	AXNH01	7	3389	3166	10/24/13	4/2/17	Scaffold	Broad Institute	SAMN02334508	GCA_000480315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/315/GCA_000480315.1_Bruc_suis_06-988-1656_V1	-	06-988-1656
Rhizobium leguminosarum bv. phaseoli FA23	1041140	PRJNA163059	163059	Proteobacteria	Alphaproteobacteria	7.54555	60.8	-	ATTN01	66	7386	7017	7/9/13	4/2/17	Contig	DOE Joint Genome Institute	SAMN02441595	GCA_000419705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/705/GCA_000419705.1_ASM41970v1	-	FA23
Treponema pallidum subsp. pallidum	161	PRJNA322283	322283	Spirochaetes	Spirochaetia	1.13913	52.8	chromosome:NZ_CP016059.1/CP016059.1	-	1	1066	1004	8/25/16	4/5/17	Chromosome	"National Institute of Health, Portugal"	SAMN05150626	GCA_001713135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/135/GCA_001713135.1_ASM171313v1	-	PT_SIF1167
Borrelia burgdorferi 80a	498736	PRJNA28623	28623	Spirochaetes	Spirochaetia	1.79836	28.4	-	ABJU01	252	-	-	2/6/08	12/5/13	Contig	J. Craig Venter Institute	SAMN02436320	GCA_000172255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/255/GCA_000172255.1_JCVI-gbb80a-v1.0	-	80a
Burkholderia multivorans	87883	PRJEB12791	382506	Proteobacteria	Betaproteobacteria	6.30882	67.2	-	FKJY01	3	6020	5784	4/11/17	7/9/17	Contig	LM-UGent	SAMEA3876911	GCA_900079525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/525/GCA_900079525.1_ASM90007952v1	-	-
Clostridium botulinum	1491	PRJNA290143	290143	Terrabacteria group	Firmicutes	3.00534	27.8	-	LGVS01	75	2876	2767	8/11/15	3/26/17	Scaffold	Anses	SAMN03876598	GCA_001264515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/515/GCA_001264515.1_ASM126451v1	26430029	48212-CD
Vibrio fischeri ETJB5C	1367490	PRJNA212811	212811	Proteobacteria	Gammaproteobacteria	3.66157	39	-	AUUZ01	3679	-	-	6/8/17	6/8/17	Contig	New Mexico State University	SAMN06226647	GCA_002179715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/715/GCA_002179715.1_ASM217971v1	-	ETJB5C
Bacillus sp. X1(2014)	1565991	PRJNA253895	253895	Terrabacteria group	Firmicutes	3.42267	38.1	chromosome:NZ_CP008855.1/CP008855.1	-	1	3433	3103	9/3/14	4/9/17	Complete Genome	New England Biolabs	SAMN02900498	GCA_000747345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/345/GCA_000747345.1_ASM74734v1	25700417	X1
Haemophilus influenzae CGSHiCZ412602	1295140	PRJNA189674	189674	Proteobacteria	Gammaproteobacteria	1.8118	38.1	chromosome:NZ_CP007805.1/CP007805.1	-	1	1791	1655	6/5/14	3/24/17	Complete Genome	Center for Genomic Science	SAMN02800345	GCA_000698365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/365/GCA_000698365.1_ASM69836v1	-	CGSHiCZ412602
Vibrio harveyi	669	PRJNA257174	257174	Proteobacteria	Gammaproteobacteria	5.72509	45	-	JPTL01	2036	-	-	7/22/15	7/22/15	Contig	Naval Research Laboratory	SAMN02948021	GCA_001185565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/565/GCA_001185565.1_ASM118556v1	-	74F
Salinispora arenicola CNX508	1137257	PRJNA169782	169782	Terrabacteria group	Actinobacteria	5.63285	69.5	-	AZWT01	96	5124	4741	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597250	GCA_000514875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/875/GCA_000514875.1_ASM51487v1	-	CNX508
Lactobacillus casei	1582	PRJNA378123	378123	Terrabacteria group	Firmicutes	2.77258	46.4	-	MWVE01	66	2870	2627	3/14/17	3/16/17	Contig	The University of Hong Kong	SAMN06480069	GCA_002027415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/415/GCA_002027415.1_ASM202741v1	-	W14
Coxiella burnetii RSA 493	227377	PRJEB7556	265984	Proteobacteria	Gammaproteobacteria	2.07712	42.5	-	CDBG01	1	2332	1943	11/4/14	4/3/17	Contig	URMITE	SAMEA3108619	GCA_000826165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/165/GCA_000826165.2_Coxiella_burnetii_Cb171_QLYMPHOMA	-	Cb171_QLYMPHOMA
Bartonella henselae	38323	PRJEB5998	242928	Proteobacteria	Alphaproteobacteria	1.9755	38.1	chromosome I:NZ_HG969191.1/HG969191.1	-	1	1767	1538	4/3/14	4/10/17	Complete Genome	URMITE	SAMEA3138975	GCA_000612765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/765/GCA_000612765.1_PRJEB5998_assembly_1	-	BM1374165
Vibrio parahaemolyticus EKP-026	1238217	PRJNA176652	176652	Proteobacteria	Gammaproteobacteria	5.11273	45.3	-	JABV01	103	4933	4693	1/31/14	3/18/17	Scaffold	IGS	SAMN02641511	GCA_000525005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/005/GCA_000525005.2_vpEKP026	-	EKP-026
Aeromonas salmonicida subsp. salmonicida	29491	PRJNA264317	264317	Proteobacteria	Gammaproteobacteria	4.93514	58.3	-	MIIU01	132	4781	4253	12/13/16	4/6/17	Contig	Universite Laval	SAMN05728472	GCA_001902125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/125/GCA_001902125.1_ASM190212v1	-	JF3517
Streptococcus mitis	28037	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.88816	40.3	-	JWFA01	79	1834	1737	7/10/15	4/3/17	Contig	University of Washington	SAMN03197008	GCA_001070035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/035/GCA_001070035.1_ASM107003v1	26230489	1042_SPSE
Oenococcus oeni S22	1428442	PRJNA229732	229732	Terrabacteria group	Firmicutes	1.81014	37.8	-	AZKA01	43	1855	1567	10/1/14	4/11/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02902404	GCA_000761805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/805/GCA_000761805.1_Oeoe_S22_1.0	24901216	S22
Xanthomonas oryzae pv. oryzae	64187	PRJNA269400	269400	Proteobacteria	Gammaproteobacteria	4.2406	63.9	-	JXDW01	398	4219	3404	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252499	GCA_001927305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/305/GCA_001927305.1_ASM192730v1	-	BXO439
Campylobacter fetus subsp. testudinum	1507806	PRJNA285180	285180	Proteobacteria	delta/epsilon subdivisions	1.74177	33.1	-	LMBF01	132	1760	1659	8/5/16	4/5/17	Contig	Utrecht University	SAMN03741940	GCA_001699455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/455/GCA_001699455.1_ASM169945v1	27333878	D6690
Haemophilus influenzae KR494	1334187	PRJNA203127	203127	Proteobacteria	Gammaproteobacteria	1.85618	38.1	chromosome:NC_022356.1/CP005967.1	-	1	1808	1635	9/9/13	3/24/17	Complete Genome	Lund University	SAMN02603575	GCA_000465255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/255/GCA_000465255.1_ASM46525v1	24092777	KR494
Leptospira borgpetersenii serovar Ballum	280505	PRJNA374546	374546	Spirochaetes	Spirochaetia	3.96388	40	-	MVIU01	37	3836	3455	3/3/17	3/6/17	Contig	School of Veterinary Medicine and Animal Science / University of Sao Paulo	SAMN06327236	GCA_002018035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/035/GCA_002018035.1_ASM201803v1	-	LO-24
Lactobacillus delbrueckii subsp. jakobsenii ZN7a-9 = DSM 26046	1217420	PRJNA171594	171594	Terrabacteria group	Firmicutes	1.73081	50.2	-	ALPY01	75	1756	1570	5/2/13	4/1/17	Contig	University of Copenhagen	SAMN02471706	GCA_000387565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/565/GCA_000387565.1_ASM38756v1	-	ZN7a-9
Yersinia pseudotuberculosis	633	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.66954	47.3	-	CQEU01	95	4316	4080	3/23/15	4/3/17	Scaffold	SC	SAMEA859912	GCA_001124425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/425/GCA_001124425.1_5139_2_9	-	No5
Brucella abortus	235	PRJNA400357	400357	Proteobacteria	Alphaproteobacteria	3.42759	56.8023	chromosome 1:CP023243.1; chromosome 2:CP023244.1	-	2	3335	2898	9/12/17	9/12/17	Chromosome	IZSM-Portici	SAMN07572659	GCA_002291385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/385/GCA_002291385.1_ASM229138v1	-	14330
Streptococcus constellatus subsp. pharyngis C1050	862969	PRJNA50421	50421	Terrabacteria group	Firmicutes	1.99116	38.1	chromosome:NC_022238.1/CP003859.1	-	1	2029	1833	9/3/13	4/1/17	Complete Genome	"National Microbiology Laboratory, Public Health Agency of Canada"	SAMN02603661	GCA_000463425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/425/GCA_000463425.1_ASM46342v1	24341328	C1050
Streptococcus salivarius	1304	PRJNA320256	320256	Terrabacteria group	Firmicutes	2.23968	39.8	-	LXIO01	89	2086	1985	12/16/16	4/6/17	Contig	State University of Campinas	SAMN04934536	GCA_001907105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/105/GCA_001907105.1_ASM190710v1	-	85-05 S23
Shigella boydii	621	PRJNA288481	288481	Proteobacteria	Gammaproteobacteria	4.49024	50.8	-	LPTF01	544	5124	4302	12/15/16	2/26/17	Contig	"University of Maryland, School of Medicine"	SAMN04001701	GCA_001906265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/265/GCA_001906265.1_ASM190626v1	-	602573
Clostridioides difficile T23	1215070	PRJEB200	222737	Terrabacteria group	Firmicutes	4.07884	28.3	-	CAMN01	293	3824	3664	10/14/13	3/15/17	Scaffold	LPBA	SAMEA3138892	GCA_000530795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/795/GCA_000530795.1_T23	24482682	T23
Vibrio cholerae	666	PRJNA278095	278095	Proteobacteria	Gammaproteobacteria	4.05708	47.4987	plasmid p2011004:NZ_CM003324.1/CM003324.1	LBBP01	64	3879	3705	5/7/15	3/26/17	Scaffold	Yunnan Provincial Centre for Disease Control and Prevention	SAMN03402961	GCA_001029975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/975/GCA_001029975.1_ASM102997v1	-	YN2011004
Ralstonia solanacearum	305	PRJEB8309	279369	Proteobacteria	Betaproteobacteria	5.43669	66.4	-	CDSB01	1	4991	4390	3/24/15	4/4/17	Scaffold	CIRAD	SAMEA3218686	GCA_001373315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/315/GCA_001373315.1_CFBP3858	-	UW181
Listeria monocytogenes	1639	PRJEB538	177104	Terrabacteria group	Firmicutes	2.77652	38.1	chromosome:HE999704.1	-	1	3216	3131	1/11/13	2/27/15	Complete Genome	DTU Food	SAMEA2272573	GCA_000382925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/925/GCA_000382925.1_ASM38292v1	-	La111
Burkholderia mallei	13373	PRJNA244051	244051	Proteobacteria	Betaproteobacteria	5.69944	68.4	-	JNLV01	2	6176	5497	9/23/14	4/2/17	Scaffold	Los Alamos National Laboratory	SAMN02837859	GCA_000756865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/865/GCA_000756865.1_BMP	25414490	SR092700I
Corynebacterium glutamicum	1718	PRJDB1732	369769	Terrabacteria group	Actinobacteria	3.10084	54.2	-	BAYH01	113	2914	2726	2/3/17	4/6/17	Contig	Yamaguchi University	SAMD00000550	GCA_002003445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/003/445/GCA_002003445.1_ASM200344v1	-	CS176
Bacillus pumilus	1408	PRJNA341926	341926	Terrabacteria group	Firmicutes	3.69188	41.2	-	MIJA01	109	3787	3623	6/6/17	6/15/17	Contig	University of the Western Cape	SAMN05730644	GCA_002174275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/275/GCA_002174275.1_ASM217427v1	28218694	PE09-72
Listeria monocytogenes N53-1	1234142	PRJEB539	177090	Terrabacteria group	Firmicutes	2.77685	38.1	chromosome:HE999705.1	-	1	3235	3150	1/11/13	2/27/15	Complete Genome	DTU Food	SAMEA2271966	GCA_000382945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/945/GCA_000382945.1_ASM38294v1	-	N53-1
Listeria monocytogenes L312	882094	PRJEA51857	51857	Terrabacteria group	Firmicutes	2.91235	38.1	chromosome:NC_018642.1/FR733642.2	-	1	2935	2823	9/10/12	2/26/17	Complete Genome	ERA-NET / Spatelis	SAMEA2272305	GCA_000307085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/085/GCA_000307085.1_ASM30708v1	23339658	L312
Burkholderia cenocepacia	95486	PRJNA336117	336117	Proteobacteria	Betaproteobacteria	8.20316	66.7	-	MDWA01	155	7771	7433	9/5/16	3/28/17	Contig	LAU	SAMN05504489	GCA_001720525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/525/GCA_001720525.1_ASM172052v1	-	AE_MEH_16
Lactobacillus reuteri	1598	PRJNA342243	342243	Terrabacteria group	Firmicutes	1.99624	38.8	-	MIMT01	149	1975	1824	5/11/17	5/22/17	Contig	Seoul National University	SAMN05751494	GCA_002128655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/655/GCA_002128655.1_ASM212865v1	-	KLR3004
Streptococcus thermophilus	1308	PRJNA316674	316674	Terrabacteria group	Firmicutes	1.74727	39.1	-	LVWV01	53	1871	1642	4/20/16	4/5/17	Scaffold	Chr. Hansen A/S	SAMN04589353	GCA_001624895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/624/895/GCA_001624895.1_ASM162489v1	-	St1-WT
Bacteroides fragilis str. 34-F-2 #13	1339336	PRJNA206179	206179	FCB group	Bacteroidetes/Chlorobi group	5.26288	43.4	-	JGCQ01	426	4742	4275	3/20/14	4/18/17	Contig	IGS	SAMN02315073	GCA_000598425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/425/GCA_000598425.1_ASM59842v1	-	34-F-2 #13
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.23766	51	-	CXNO01	193	4596	4057	7/17/15	2/24/17	Contig	SC	SAMEA2058006	GCA_001251835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/835/GCA_001251835.1_9870_7_11	-	144446
Listeria monocytogenes Finland 1998	393127	PRJNA17319	17319	Terrabacteria group	Firmicutes	2.87443	38.1	chromosome:NC_017547.1/CP002004.1	-	1	2905	2765	9/14/11	2/26/17	Complete Genome	Broad Institute	SAMN00012880	GCA_000168595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/595/GCA_000168595.2_ASM16859v2	-	Finland 1988
Bacillus licheniformis	1402	PRJNA338659	338659	Terrabacteria group	Firmicutes	4.53603	45.6	-	MEDD01	60	4766	4570	12/9/16	4/6/17	Contig	Tennessee State University	SAMN05560547	GCA_001896295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/295/GCA_001896295.1_ASM189629v1	-	YNP5-TSU
Vibrio vulnificus	672	PRJNA276162	276162	Proteobacteria	Gammaproteobacteria	5.87882	45.2	-	JZEQ01	134	5693	5402	3/23/15	4/3/17	Contig	Hankuk University of Foreign Studies	SAMN03371456	GCA_000959825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/825/GCA_000959825.1_ASM95982v1	-	SC9729
Pseudomonas syringae pv. daphniphylli	264455	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.93336	58.2	-	LJQF01	528	5553	5041	10/20/15	3/27/17	Scaffold	University of Toronto	SAMN03976283	GCA_001400275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/275/GCA_001400275.1_PdaICMP9757	-	ICMP9757
Streptococcus suis YS72	1214217	PRJNA171480	171480	Terrabacteria group	Firmicutes	2.35965	41.4	-	ALNF01	78	2337	2177	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469532	GCA_000440175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/175/GCA_000440175.1_version1	-	YS72
Cyclobacterium marinum DSM 745	880070	PRJNA51773	51773	FCB group	Bacteroidetes/Chlorobi group	6.22127	38.1	chromosome:NC_015914.1/CP002955.1	-	1	5065	4964	8/3/11	5/18/17	Complete Genome	JGI	SAMN02261369	GCA_000222485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/485/GCA_000222485.1_ASM22248v1	-	DSM 745
Haemophilus influenzae R2866	262728	PRJNA9621	9621	Proteobacteria	Gammaproteobacteria	1.93231	38.1	chromosome:NC_017451.1/CP002277.1	-	1	1935	1803	10/22/10	3/22/17	Complete Genome	University of Washington Genome Center; Seattle Biomedical Research Institute	SAMN02604259	GCA_000165525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/165/525/GCA_000165525.1_ASM16552v1	-	R2866
Haemophilus influenzae 10810	862964	PRJNA50409	50409	Proteobacteria	Gammaproteobacteria	1.98154	38.1	chromosome:NC_016809.1/FQ312006.1	-	1	2012	1851	7/23/10	3/22/17	Complete Genome	The Wellcome Trust Sanger Institute	SAMEA3138383	GCA_000210875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/875/GCA_000210875.1_ASM21087v1	-	10810
Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088	391904	PRJNA237576	237576	Terrabacteria group	Actinobacteria	2.78032	59.8	-	JDTT01	176	2648	2386	11/4/14	4/2/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442011	GCA_000771105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/105/GCA_000771105.1_DSM-20088	25658111	DSM 20088
Fusobacterium nucleatum subsp. nucleatum ChDC F316	1307428	PRJNA193580	193580	Fusobacteria	Fusobacteriia	2.16212	27	-	ATKC01	83	2088	1966	8/29/13	4/1/17	Contig	Dental School of Chosun University	SAMN02469582	GCA_000455945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/945/GCA_000455945.1_de_novo	24336379	ChDC F316
Agrobacterium tumefaciens	358	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	5.51031	58.8	-	DDCM01	265	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454190	GCA_002335295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/295/GCA_002335295.1_ASM233529v1	28894102	-
Shigella flexneri S7737	1212571	PRJNA171078	171078	Proteobacteria	Gammaproteobacteria	4.58341	50.9	-	AMJY01	288	4953	4177	1/6/15	8/4/17	Contig	Institute for Genome Sciences	SAMN03276486	GCA_000815665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/665/GCA_000815665.1_ASM81566v1	-	S7737
Bacillus megaterium DSM 319	592022	PRJNA42425	42425	Terrabacteria group	Firmicutes	5.09745	38.1	chromosome:NC_014103.1/CP001982.1	-	1	5245	4941	4/16/10	6/15/17	Complete Genome	Technical University Braunschweig	SAMN02603894	GCA_000025805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/805/GCA_000025805.1_ASM2580v1	21705586	DSM 319
Pseudomonas putida OUS82	1410669	PRJNA223432	223432	Proteobacteria	Gammaproteobacteria	6.63331	61.8	-	AZBL01	164	6287	5996	12/13/13	4/2/17	Contig	SCELSE	SAMN02470576	GCA_000507325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/507/325/GCA_000507325.1_P.putidaOUS82_v1	24435866	OUS82
Xylella fastidiosa subsp. pauca 11399	1445511	PRJNA233654	233654	Proteobacteria	Gammaproteobacteria	2.73606	52.6387	plasmid pXF51:NZ_CM004499.1/CM004499.1	JNBT01	36	2656	2310	7/13/16	4/11/17	Contig	IAC - Centro de citricultura	SAMN02786837	GCA_001684415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/684/415/GCA_001684415.1_ASM168441v1	-	11399
Leptospira interrogans serovar Bataviae str. L1111	1049804	PRJNA74089	74089	Spirochaetes	Spirochaetia	4.85358	35.1	-	AHND02	82	4442	3972	1/24/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436427	GCA_000244015.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/015/GCA_000244015.3_gls454087v2.0	-	L1111
Listeria monocytogenes serotype 4b str. CLIP 80459	568819	PRJEA32207	32207	Terrabacteria group	Firmicutes	2.91269	38.1	chromosome:NC_012488.1/FM242711.1	-	1	2935	2823	3/30/09	2/26/17	Complete Genome	Institut Pasteur - Unite de Biologie des Bacteries Intracellulaires	SAMEA2272134	GCA_000026705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/705/GCA_000026705.1_ASM2670v1	-	Clip80459
Anabaena sp. 90	46234	PRJNA30803	30803	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.30567	38.0907	chromosome chANA01:NC_019427.1/CP003284.1; chromosome chANA02:NC_019439.1/CP003285.1; plasmid pANA01:NC_019428.1/CP003286.1; plasmid pANA02:NC_019429.1/CP003287.1; plasmid pANA03:NC_019440.1/CP003288.1	-	5	4883	4531	11/13/12	5/18/17	Complete Genome	University of Helsinki	SAMN02604187	GCA_000312705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/705/GCA_000312705.1_ASM31270v1	23148582	90
Lactobacillus amylovorus	1604	PRJNA53145	53145	Terrabacteria group	Firmicutes	2.09777	38.0807	chromosome:NC_015214.1/CP002559.1; plasmid pRKC30SC1:NC_015213.1/CP002560.1; plasmid pRKC30SC2:NC_015218.1/CP002561.1	-	3	2143	1925	3/7/11	4/7/17	Complete Genome	Korea University	SAMN02603487	GCA_000191545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/545/GCA_000191545.1_ASM19154v1	21478365	30SC
Bartonella grahamii as4aup	634504	PRJNA34873	34873	Proteobacteria	Alphaproteobacteria	2.36952	38.0798	chromosome:NC_012846.1/CP001562.1; plasmid pBGR3:NC_012847.1/CP001563.1	-	2	2081	1884	6/19/09	4/6/17	Complete Genome	"Dept. of Molecular Evolution, Uppsala University"	SAMN02603206	GCA_000022725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/725/GCA_000022725.1_ASM2272v1	19578403	as4aup
Carnobacterium sp. CP1	1564681	PRJNA264769	264769	Terrabacteria group	Firmicutes	2.6144	38.0779	chromosome:NZ_CP010796.1/CP010796.1; plasmid pCP1:NZ_CP010819.1/CP010819.1	-	2	2484	2328	1/4/16	4/11/17	Complete Genome	Zhejiang Wanli University	SAMN03140695	GCA_001483965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/483/965/GCA_001483965.1_ASM148396v1	-	CP1
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	3.14816	38.0607	chromosome:NZ_CP023052.1/CP023052.1; plasmid pCFSAN021143:NZ_CP023053.1/CP023053.1	-	2	3228	3094	9/5/17	9/7/17	Complete Genome	FDA/CFSAN	SAMN02923159	GCA_002285655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/655/GCA_002285655.1_ASM228565v1	-	FDA00006905
Haemophilus influenzae	727	PRJNA272685	272685	Proteobacteria	Gammaproteobacteria	1.91028	38.1	-	JXLX01	33	1965	1800	2/9/15	3/25/17	Contig	Novartis Vaccines	SAMN03284971	GCA_000833835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/835/GCA_000833835.1_ASM83383v1	25814593	Hi322
Prochlorococcus marinus	1219	PRJEB9287	287342	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.46372	31	-	CVSX01	85	1625	1555	6/17/15	4/11/17	Contig	UNIVERSITY OF CALIFORNIA - SAN DIEGO	SAMEA3368576	GCA_001180305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/305/GCA_001180305.1_CLC_assembled_contigs	-	SCGC AAA795-J16
Mycobacterium bovis	1765	PRJNA214551	214551	Terrabacteria group	Actinobacteria	4.31419	65.6	-	JQER01	83	4254	4017	9/8/14	4/2/17	Contig	South American Mycobacterium bovis WGS	SAMN02902640	GCA_000749615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/615/GCA_000749615.1_ASM74961v1	-	32-08
Mycobacterium avium subsp. paratuberculosis 4B	1078003	PRJNA72215	72215	Terrabacteria group	Actinobacteria	4.7386	69.3	-	AGAM01	479	4700	4169	12/29/11	5/19/17	Contig	University of Wisconsin- Madison	SAMN02472021	GCA_000240425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/425/GCA_000240425.2_ASM24042v2	22163226	4B
Clostridium perfringens	1502	PRJNA327410	327410	Terrabacteria group	Firmicutes	3.83041	28	-	MARM01	95	3629	3436	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323888	GCA_001949385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/385/GCA_001949385.1_ASM194938v1	28062388	JFP810
Xanthomonas campestris	339	PRJNA283309	283309	Proteobacteria	Gammaproteobacteria	5.18422	65.5	-	LHBN01	225	4512	4205	8/11/15	4/4/17	Contig	FDA	SAMN03897572	GCA_001264275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/275/GCA_001264275.1_CFSAN033080	-	CFSAN033080
Lactococcus lactis subsp. lactis Dephy 1	1390360	PRJEB4823	223373	Terrabacteria group	Firmicutes	2.60355	35.1	-	CBUJ01	56	2675	2453	10/22/13	4/2/17	Scaffold	INRA-MIG	SAMEA2272647	GCA_000493355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/355/GCA_000493355.1_LL-D1-V1	-	Dephy 1
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	3.14818	38.0607	chromosome:NZ_CP023050.1/CP023050.1; plasmid pCFSAN059932:NZ_CP023051.1/CP023051.1	-	2	3228	3102	9/5/17	9/7/17	Complete Genome	FDA/CFSAN	SAMN06339459	GCA_002285835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/835/GCA_002285835.1_ASM228583v1	-	FDA00011238
Staphylococcus epidermidis VCU127	904343	PRJNA53769	53769	Terrabacteria group	Firmicutes	2.4296	32	-	AHLH01	81	2431	2279	2/7/12	3/23/17	Contig	J. Craig Venter Institute	SAMN00117463	GCA_000247165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/165/GCA_000247165.2_ASM24716v2	-	VCU127
Listeria monocytogenes SLCC2755	932919	PRJEA50379	50379	Terrabacteria group	Firmicutes	3.02393	38.0599	chromosome Chromosome:NC_018587.1/FR733646.1; plasmid pLM1-2bUG1:NC_014495.1/FR667692.1	-	2	3045	2912	9/10/12	2/26/17	Complete Genome	ERA-NET / Spatelis	SAMEA2271969	GCA_000197755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/197/755/GCA_000197755.2_ASM19775v2	23339658	SLCC2755
Yersinia pestis	632	PRJNA240107	240107	Proteobacteria	Gammaproteobacteria	4.83056	47.5203	chromosome:NZ_CP009996.1/CP009996.1; plasmid plasmid1:NZ_CP009995.1/CP009995.1; plasmid plasmid2:NZ_CP009994.1/CP009994.1; plasmid plasmid3:NZ_CP009993.1/CP009993.1; plasmid plasmid4:NZ_CP009992.1/CP009992.1	-	5	4622	4381	2/9/15	4/10/17	Chromosome	Los Alamos National Laboratory	SAMN03216587	GCA_000834905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/905/GCA_000834905.1_ASM83490v1	25931590	Java9
Pseudomonas fluorescens	294	PRJEB7699	273253	Proteobacteria	Gammaproteobacteria	6.35298	58.4	-	CDMF01	1	5877	5593	1/22/15	4/3/17	Scaffold	THE UNIVERSITY OF QUEENSLAND	SAMEA3112443	GCA_000827755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/827/755/GCA_000827755.2_Pseudomonas_fluorescens_SRM1	25792057	-
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	3.23851	38.0483	chromosome:NZ_CP022020.1/CP022020.1; plasmid pCFSAN021445:NZ_CP022021.1/CP022021.1	-	2	3323	3130	6/26/17	6/28/17	Complete Genome	FDA/CFSAN	SAMN02923161	GCA_002208215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/215/GCA_002208215.1_ASM220821v1	-	FDA00006907
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	3.10552	38.042	chromosome:NZ_CP014252.1/CP014252.1; plasmid CFSAN023459_01:NZ_CP014253.1/CP014253.1; plasmid CFSAN023459_02:NZ_CP014254.1/CP014254.1	-	3	3167	3036	2/4/16	3/1/17	Complete Genome	FDA/CFSAN	SAMN03002779	GCA_001548585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/585/GCA_001548585.1_ASM154858v1	-	CFSAN023459
Leuconostoc mesenteroides subsp. dextranicum	33966	PRJNA263697	263697	Terrabacteria group	Firmicutes	1.85473	38.0389	chromosome:NZ_CP012009.1/CP012009.1; plasmid pDSM20484:NZ_CP012010.1/CP012010.1	-	2	1902	1696	7/8/15	4/3/17	Complete Genome	"Shin's Lab., Kyungpook National University"	SAMN03105774	GCA_001047695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/695/GCA_001047695.1_ASM104769v1	-	DSM 20484
Enterococcus faecium	1352	PRJNA275194	275194	Terrabacteria group	Firmicutes	2.87819	38.0247	chromosome:NZ_CP011828.1/CP011828.1; plasmid unnamed1:NZ_CP011829.1/CP011829.1; plasmid unnamed2:NZ_CP011830.1/CP011830.1; plasmid unnamed3:NZ_CP011831.1/CP011831.1	-	4	2966	2746	3/11/16	3/27/17	Complete Genome	Robert Koch-Institute	SAMN03339922	GCA_001587115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/115/GCA_001587115.1_ASM158711v1	26682961	UW8175
Listeria monocytogenes	1639	PRJNA328054	328054	Terrabacteria group	Firmicutes	2.93503	38	chromosome:NZ_CP016629.1/CP016629.1	-	1	2957	2839	7/17/17	7/19/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN05363481	GCA_002220325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/325/GCA_002220325.1_ASM222032v1	-	FORC_049
Listeria monocytogenes serotype 4b str. 10-0809	1196162	PRJNA167875	167875	Terrabacteria group	Firmicutes	2.97585	38	chromosome:NZ_CP007167.1/CP007167.1	-	1	3025	2923	7/3/17	7/5/17	Complete Genome	Public Health Agency of Canada	SAMN07124730	GCA_002214065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/065/GCA_002214065.1_ASM221406v1	-	10-0809
Pseudomonas fluorescens	294	PRJNA275699	275699	Proteobacteria	Gammaproteobacteria	6.12486	60.7	-	JYHW01	110	5588	5330	3/13/15	4/3/17	Scaffold	Volcani Research Center	SAMN03352192	GCA_000952735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/735/GCA_000952735.1_ASM95273v1	-	NT0133
Yersinia pestis	632	PRJNA240084	240084	Proteobacteria	Gammaproteobacteria	4.57268	47.7947	chromosome:NZ_CP010293.1/CP010293.1; plasmid pPCP:NZ_CP010294.1/CP010294.1	-	2	4309	3974	2/9/15	3/25/17	Chromosome	Los Alamos National Laboratory	SAMN03256395	GCA_000835005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/835/005/GCA_000835005.1_ASM83500v1	25931590	Nairobi
Listeria monocytogenes serotype 1/2b str. 10-0810	1196163	PRJNA167876	167876	Terrabacteria group	Firmicutes	3.01794	38	chromosome:NZ_CP007168.1/CP007168.1	-	1	3075	2973	7/3/17	7/5/17	Complete Genome	Public Health Agency of Canada	SAMN07124731	GCA_002214085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/085/GCA_002214085.1_ASM221408v1	-	10-0810
Staphylococcus epidermidis VCU128	904344	PRJNA53771	53771	Terrabacteria group	Firmicutes	2.52704	31.9	-	AHLI01	58	2512	2337	2/7/12	3/23/17	Contig	J. Craig Venter Institute	SAMN00116852	GCA_000247185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/185/GCA_000247185.2_ASM24718v2	-	VCU128
Listeria monocytogenes serotype 1/2b str. 10-0811	1196164	PRJNA167877	167877	Terrabacteria group	Firmicutes	3.01794	38	chromosome:NZ_CP007169.1/CP007169.1	-	1	3075	2973	7/3/17	7/5/17	Complete Genome	Public Health Agency of Canada	SAMN07124732	GCA_002214105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/105/GCA_002214105.1_ASM221410v1	-	10-0811
Lactococcus lactis RTB018	1408188	PRJNA227015	227015	Terrabacteria group	Firmicutes	2.48665	35.4	-	JCOB01	17	2511	2147	6/14/16	4/5/17	Scaffold	Omics Solutions	SAMN02399558	GCA_001672265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/265/GCA_001672265.1_Llactis1.0	-	RTB018
Xanthomonas campestris	339	PRJNA283309	283309	Proteobacteria	Gammaproteobacteria	5.10123	65.4	-	LHBK01	197	4459	4125	8/11/15	4/4/17	Contig	FDA	SAMN03897569	GCA_001264285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/285/GCA_001264285.1_CFSAN033077_1	26450732	CFSAN033077
Clostridium perfringens	1502	PRJNA327411	327411	Terrabacteria group	Firmicutes	3.66041	28	-	MARN01	70	3373	3212	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323889	GCA_001949395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/395/GCA_001949395.1_ASM194939v1	28062388	JFP826
Mycobacterium avium subsp. paratuberculosis DT 3	1078004	PRJNA72217	72217	Terrabacteria group	Actinobacteria	4.72517	69.3	-	AGAN01	531	4695	4157	12/29/11	5/19/17	Contig	University of Wisconsin- Madison	SAMN02472023	GCA_000240445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/445/GCA_000240445.2_ASM24044v2	22163226	DT 3
Mycobacterium bovis	1765	PRJNA214551	214551	Terrabacteria group	Actinobacteria	4.32932	65.6	-	JQEQ01	63	4265	4033	9/8/14	4/2/17	Contig	South American Mycobacterium bovis WGS	SAMN02902638	GCA_000749625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/625/GCA_000749625.1_ASM74962v1	-	18-08C
Prochlorococcus marinus	1219	PRJEB9287	287342	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.44399	31.2	-	CVSZ01	93	1626	1550	6/17/15	4/3/17	Contig	UNIVERSITY OF CALIFORNIA - SAN DIEGO	SAMEA3368577	GCA_001180325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/325/GCA_001180325.1_CLC_assembled_contigs	-	SCGC AAA795-M23
Haemophilus influenzae	727	PRJNA272685	272685	Proteobacteria	Gammaproteobacteria	1.8579	38	-	JXLZ01	30	1883	1738	2/9/15	3/25/17	Contig	Novartis Vaccines	SAMN03284973	GCA_000833855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/855/GCA_000833855.1_ASM83385v1	25814593	Hi359
Listeria monocytogenes serotype 1/2a str. 10-0812	1196165	PRJNA167878	167878	Terrabacteria group	Firmicutes	2.94223	38	chromosome:NZ_CP007170.1/CP007170.1	-	1	3014	2909	7/3/17	7/5/17	Complete Genome	Public Health Agency of Canada	SAMN07124733	GCA_002214125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/125/GCA_002214125.1_ASM221412v1	-	10-0812
Listeria monocytogenes serotype 1/2a str. 10-0813	1196166	PRJNA167879	167879	Terrabacteria group	Firmicutes	2.94223	38	chromosome:NZ_CP007171.1/CP007171.1	-	1	3014	2909	7/3/17	7/5/17	Complete Genome	Public Health Agency of Canada	SAMN07124734	GCA_002214145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/145/GCA_002214145.1_ASM221414v1	-	10-0813
Streptococcus pneumoniae A026	1408179	PRJNA222882	222882	Terrabacteria group	Firmicutes	2.09188	39.8	chromosome:NC_022655.1/CP006844.1	-	1	2276	2022	11/1/13	3/9/17	Chromosome	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN02603401	GCA_000494795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/795/GCA_000494795.1_ASM49479v1	24336372	A026
Listeria monocytogenes serotype 4b str. 02-6679	1196174	PRJNA167887	167887	Terrabacteria group	Firmicutes	2.908	38	chromosome:NZ_CP008821.1/CP008821.1	-	1	2933	2836	6/30/17	7/3/17	Complete Genome	Public Health Agency of Canada	SAMN02944848	GCA_002213505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/505/GCA_002213505.1_ASM221350v1	-	Feb-79
Listeria monocytogenes serotype 1/2a str. 02-5993	1196180	PRJNA167893	167893	Terrabacteria group	Firmicutes	2.99925	38	chromosome:NZ_CP007007.1/CP007007.1	-	1	3081	2973	6/30/17	7/3/17	Complete Genome	Public Health Agency of Canada	SAMN07124746	GCA_002213545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/545/GCA_002213545.1_ASM221354v1	-	Feb-93
Listeria monocytogenes serotype 1/2a str. 04-5457	1196181	PRJNA167894	167894	Terrabacteria group	Firmicutes	2.99933	38	chromosome:NZ_CP007008.1/CP007008.1	-	1	3081	2973	6/30/17	7/3/17	Complete Genome	Public Health Agency of Canada	SAMN07124747	GCA_002213565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/565/GCA_002213565.1_ASM221356v1	-	Apr-57
Leptospira interrogans serovar Autumnalis str. LP101	1049795	PRJNA74093	74093	Spirochaetes	Spirochaetia	5.03019	35.2	-	AHNF02	127	4611	4130	1/24/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436428	GCA_000244055.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/055/GCA_000244055.3_gls454089v02	-	LP101
Xylella fastidiosa subsp. multiplex	644357	PRJNA314986	314986	Proteobacteria	Gammaproteobacteria	2.51397	51.9	-	LUYA01	271	2405	2155	1/25/17	4/6/17	Contig	INRA	SAMN04546487	GCA_001971465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/465/GCA_001971465.1_ASM197146v1	-	CFBP8418
Pseudomonas putida W15Oct28	1449986	PRJNA235256	235256	Proteobacteria	Gammaproteobacteria	6.32051	62.8	-	JENB01	119	5703	5425	6/16/14	4/4/17	Contig	Vrije Universiteit Brussel	SAMN02644482	GCA_000708715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/715/GCA_000708715.2_W15Oct28_99_scaffold	25369289	W15Oct28
Listeria monocytogenes serotype 1/2a str. 08-6056	1196182	PRJNA167895	167895	Terrabacteria group	Firmicutes	3.03262	38	chromosome:NZ_CP007009.1/CP007009.1	-	1	3125	3017	6/30/17	7/3/17	Complete Genome	Public Health Agency of Canada	SAMN07124748	GCA_002213585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/585/GCA_002213585.1_ASM221358v1	-	Aug-56
Shigella flexneri MT1457	1212578	PRJNA171085	171085	Proteobacteria	Gammaproteobacteria	4.55208	50.9	-	AMKF01	341	4893	4125	1/6/15	8/4/17	Contig	Institute for Genome Sciences	SAMN03276489	GCA_000815805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/805/GCA_000815805.1_ASM81580v1	-	MT1457
Fusobacterium nucleatum subsp. vincentii ChDC F8	1307427	PRJNA193577	193577	Fusobacteria	Fusobacteriia	1.98927	26.9	-	ATKB01	186	1919	1769	8/29/13	4/1/17	Contig	Dental School of Chosun University	SAMN02469575	GCA_000455965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/965/GCA_000455965.1_de_novo	24336378	ChDC F8
Bifidobacterium longum subsp. suis DSM 20211	1437597	PRJNA237576	237576	Terrabacteria group	Actinobacteria	2.38997	60	-	JDUC01	129	2118	1885	11/4/14	4/3/17	Contig	Key Laboratory of Dairy BiotecInner Mongolia Agricultural University	SAMN02442020	GCA_000771285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/771/285/GCA_000771285.1_DSM-20211	25658111	DSM 20211
Listeria monocytogenes serotype 1/2a str. 08-7374	1196185	PRJNA167898	167898	Terrabacteria group	Firmicutes	2.99933	38	chromosome:NZ_CP007010.1/CP007010.1	-	1	3080	2972	6/30/17	7/3/17	Complete Genome	Public Health Agency of Canada	SAMN07124749	GCA_002213605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/605/GCA_002213605.1_ASM221360v1	-	Aug-74
Listeria monocytogenes serotype 1/2a str. 08-7669	1196186	PRJNA167899	167899	Terrabacteria group	Firmicutes	2.95458	38	chromosome:NZ_CP007011.1/CP007011.1	-	1	3019	2913	6/30/17	7/3/17	Complete Genome	Public Health Agency of Canada	SAMN07124750	GCA_002213625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/625/GCA_002213625.1_ASM221362v1	-	Aug-69
Listeria monocytogenes serotype 1/2a str. 10-1046	1196189	PRJNA167902	167902	Terrabacteria group	Firmicutes	2.99821	38	chromosome:NZ_CP007017.1/CP007017.1	-	1	3077	2969	6/30/17	7/3/17	Complete Genome	Public Health Agency of Canada	SAMN07124751	GCA_002213645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/645/GCA_002213645.1_ASM221364v1	-	10-1046
Streptococcus suis YS74	1214218	PRJNA171481	171481	Terrabacteria group	Firmicutes	2.46635	41.2	-	ALNG01	136	2481	2282	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469549	GCA_000440195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/195/GCA_000440195.1_version1	-	YS74
Pseudomonas syringae pv. castaneae	264450	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	6.37828	58	-	LJQD01	614	6010	5325	10/20/15	3/27/17	Scaffold	University of Toronto	SAMN03976289	GCA_001400285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/285/GCA_001400285.1_PcsICMP9419	-	ICMP9419
Vibrio vulnificus	672	PRJNA276162	276162	Proteobacteria	Gammaproteobacteria	4.88622	46.8	-	JZEO01	59	4405	4261	3/23/15	4/3/17	Contig	Hankuk University of Foreign Studies	SAMN03371458	GCA_000959835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/835/GCA_000959835.1_ASM95983v1	-	SC9761
Bacillus licheniformis	1402	PRJNA338659	338659	Terrabacteria group	Firmicutes	4.51733	45.3	-	MEDC01	46	4758	4553	12/9/16	4/6/17	Contig	Tennessee State University	SAMN05560543	GCA_001896305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/305/GCA_001896305.1_ASM189630v1	-	YNP3-TSU
Listeria monocytogenes serotype 1/2a str. 10-1321	1196191	PRJNA167904	167904	Terrabacteria group	Firmicutes	2.99933	38	chromosome:NZ_CP007018.1/CP007018.1	-	1	3080	2973	6/30/17	7/3/17	Complete Genome	Public Health Agency of Canada	SAMN07124752	GCA_002213665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/665/GCA_002213665.1_ASM221366v1	-	10-1321
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.70904	50.7	-	CXHW01	384	5338	4546	7/16/15	2/24/17	Contig	SC	SAMEA2003376	GCA_001251875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/875/GCA_001251875.1_8289_7_51	-	77231
Bacteroides fragilis str. 3986 N(B)19	1339289	PRJNA206120	206120	FCB group	Bacteroidetes/Chlorobi group	5.31168	44.1	-	JGCW01	792	4825	4362	3/20/14	4/18/17	Contig	IGS	SAMN02317048	GCA_000598445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/445/GCA_000598445.1_ASM59844v1	-	3986 N(B)19
Streptococcus thermophilus	1308	PRJNA316677	316677	Terrabacteria group	Firmicutes	1.74524	39.1	-	LVWW01	45	1868	1638	4/20/16	4/5/17	Scaffold	Chr. Hansen A/S	SAMN04589445	GCA_001624915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/624/915/GCA_001624915.1_ASM162491v1	-	St1-GS-2
Lactobacillus reuteri	1598	PRJNA342243	342243	Terrabacteria group	Firmicutes	2.27696	38.8	-	MIMU01	172	2240	2062	5/11/17	5/22/17	Contig	Seoul National University	SAMN05751495	GCA_002128685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/685/GCA_002128685.1_ASM212868v1	-	KLR3005
Burkholderia cenocepacia	95486	PRJNA336116	336116	Proteobacteria	Betaproteobacteria	8.12703	67	-	MDWB01	172	7701	7359	9/5/16	3/28/17	Contig	LAU	SAMN05504479	GCA_001720575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/575/GCA_001720575.1_ASM172057v1	-	GA_AUH_16
Listeria monocytogenes serotype 1/2a str. 95-0093	1196177	PRJNA167890	167890	Terrabacteria group	Firmicutes	3.00027	38	chromosome:NZ_CP007019.1/CP007019.1	-	1	3083	2976	6/30/17	7/3/17	Complete Genome	Public Health Agency of Canada	SAMN07124743	GCA_002213685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/685/GCA_002213685.1_ASM221368v1	-	95-0093
Listeria monocytogenes serotype 1/2a str. 98-2035	1196178	PRJNA167891	167891	Terrabacteria group	Firmicutes	3.03221	38	chromosome:NZ_CP007020.1/CP007020.1	-	1	3127	3017	6/30/17	7/3/17	Complete Genome	Public Health Agency of Canada	SAMN07124744	GCA_002213705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/705/GCA_002213705.1_ASM221370v1	-	98-2035
Bacillus pumilus	1408	PRJNA243557	243557	Terrabacteria group	Firmicutes	3.57776	41.9	-	JHUD02	9	3670	3473	5/15/14	4/4/17	Scaffold	Kazan (Volga Region) Federal University	SAMN02646548	GCA_000691485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/485/GCA_000691485.2_ASM69148v2	24926064	7P
Corynebacterium glutamicum	1718	PRJEB19159	374428	Terrabacteria group	Actinobacteria	3.13808	54.2	-	FUIB01	47	2990	2822	2/11/17	5/31/17	Contig	MICALIS	SAMEA80389168	GCA_900163685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/685/GCA_900163685.1_ASM90016368v1	-	B Co 03.31
Burkholderia mallei	13373	PRJNA244242	244242	Proteobacteria	Betaproteobacteria	5.57685	68.5	-	JPGJ01	2	5941	5449	9/4/15	4/18/17	Scaffold	Los Alamos National Laboratory	SAMN02798149	GCA_001279165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/165/GCA_001279165.1_BGX	26744368	Turkey8
Listeria monocytogenes serotype 1/2a str. 99-6370	1196179	PRJNA167892	167892	Terrabacteria group	Firmicutes	3.03221	38	chromosome:NZ_CP007021.1/CP007021.1	-	1	3127	3017	6/30/17	7/3/17	Complete Genome	Public Health Agency of Canada	SAMN07124745	GCA_002213725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/725/GCA_002213725.1_ASM221372v1	-	99-6370
Ralstonia solanacearum	305	PRJEB8309	279369	Proteobacteria	Betaproteobacteria	5.83599	66.3	-	CDQJ01	1	5410	4760	3/24/15	4/4/17	Scaffold	CIRAD	SAMEA3292285	GCA_001373335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/335/GCA_001373335.1_CFBP3858	-	CFBP3858
Vibrio cholerae	666	PRJNA278341	278341	Proteobacteria	Gammaproteobacteria	4.07424	47.5	-	LBBQ01	64	3895	3727	5/7/15	3/26/17	Scaffold	Yunnan Provincial Centre for Disease Control and Prevention	SAMN03402964	GCA_001030015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/015/GCA_001030015.1_ASM103001v1	-	YN97083
Clostridioides difficile T22	1215064	PRJEB195	222725	Terrabacteria group	Firmicutes	4.08333	28.4	-	CAMI01	332	3824	3647	10/14/13	3/16/17	Scaffold	LPBA	SAMEA3138893	GCA_000530835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/835/GCA_000530835.1_T22	24482682	T22
Shigella boydii	621	PRJNA288480	288480	Proteobacteria	Gammaproteobacteria	4.29795	50.7	-	LPTG01	471	4992	4035	12/15/16	2/26/17	Contig	"University of Maryland, School of Medicine"	SAMN04001700	GCA_001906275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/275/GCA_001906275.1_ASM190627v1	-	602404
Streptococcus salivarius	1304	PRJNA320256	320256	Terrabacteria group	Firmicutes	2.19584	39.8	-	LXOR01	11	2087	1968	4/17/17	4/21/17	Contig	State University of Campinas	SAMN04942601	GCA_002093995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/995/GCA_002093995.1_ASM209399v1	27902365	34-09 S8
Francisella tularensis subsp. tularensis	119856	PRJNA240118	240118	Proteobacteria	Gammaproteobacteria	1.89102	32.3	chromosome:NZ_CP010287.1/CP010287.1	-	1	1939	1664	2/6/15	4/3/17	Chromosome	Los Alamos National Laboratory	SAMN02769658	GCA_000833555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/555/GCA_000833555.1_ASM83355v1	25931589	Scherm
Brucella abortus	235	PRJNA400357	400357	Proteobacteria	Alphaproteobacteria	3.3794	56.7609	chromosome 1:NZ_CP023308.1/CP023308.1; chromosome 2:NZ_CP023309.1/CP023309.1	-	2	3297	2898	9/18/17	9/20/17	Chromosome	IZSM-Portici	SAMN07572607	GCA_002310355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/355/GCA_002310355.1_ASM231035v1	-	9510
Yersinia pseudotuberculosis	633	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.87406	47.4	-	CPXN01	82	4543	4301	3/23/15	4/3/17	Scaffold	SC	SAMEA859893	GCA_001125265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/265/GCA_001125265.1_5139_3_8	-	IP33038
Lactobacillus delbrueckii subsp. indicus	249265	PRJNA289289	289289	Terrabacteria group	Firmicutes	1.87741	49.5	-	LGAS01	85	1925	1617	7/31/15	4/3/17	Contig	"ChunLab, Inc"	SAMN03852101	GCA_001189855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/855/GCA_001189855.1_ASM118985v1	-	JCM 15610
Leptospira borgpetersenii serovar Kenya str. TE 0159	1049773	PRJNA74233	74233	Spirochaetes	Spirochaetia	3.92383	40.1	-	AHQT01	241	3761	3489	2/3/12	3/30/17	Scaffold	J. Craig Venter Institute	SAMN00739389	GCA_000246555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/555/GCA_000246555.2_CLC_glsol078	-	TE 0159
Listeria monocytogenes serotype 1/2a str. 10-4754	1196167	PRJNA167880	167880	Terrabacteria group	Firmicutes	2.91092	38	chromosome:NZ_CP007197.1/CP007197.1	-	1	2973	2869	6/30/17	7/3/17	Complete Genome	Public Health Agency of Canada	SAMN07124735	GCA_002213805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/805/GCA_002213805.1_ASM221380v1	-	Oct-54
Campylobacter fetus subsp. testudinum	1507806	PRJNA285178	285178	Proteobacteria	delta/epsilon subdivisions	1.80651	33.1	-	LMBE01	64	1844	1762	8/5/16	4/5/17	Contig	Utrecht University	SAMN03741934	GCA_001699465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/465/GCA_001699465.1_ASM169946v1	27333878	D6783
Xanthomonas oryzae pv. oryzae	64187	PRJNA269392	269392	Proteobacteria	Gammaproteobacteria	4.27424	63.9	-	JXDO01	479	4239	3425	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252491	GCA_001927315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/315/GCA_001927315.1_ASM192731v1	-	BXO6
Oenococcus oeni S25	1428444	PRJNA229735	229735	Terrabacteria group	Firmicutes	1.7413	37.9	-	AZJZ01	32	1765	1527	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02902403	GCA_000761825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/825/GCA_000761825.1_Oeoe_S25_1.0	24901216	S25
Streptococcus mitis	28037	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.0256	40	-	JWCV01	178	2012	1876	7/10/15	4/3/17	Contig	University of Washington	SAMN03197065	GCA_001070205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/205/GCA_001070205.1_ASM107020v1	26230489	1111_SMIT
Aeromonas salmonicida subsp. salmonicida	29491	PRJNA264317	264317	Proteobacteria	Gammaproteobacteria	4.89297	58.4	-	LMTK01	206	4715	4125	12/13/16	4/6/17	Contig	Universite Laval	SAMN04226662	GCA_001902165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/165/GCA_001902165.1_ASM190216v1	-	09-0167
Vibrio parahaemolyticus V14/01	1238205	PRJNA176640	176640	Proteobacteria	Gammaproteobacteria	5.26018	45.1	-	JALG01	101	5039	4839	2/5/14	3/18/17	Scaffold	IGS	SAMN01924113	GCA_000558885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/885/GCA_000558885.2_vpV1401	-	V14/01
Listeria monocytogenes serotype 1/2a str. 10-4758	1196168	PRJNA167881	167881	Terrabacteria group	Firmicutes	2.91092	38	chromosome:NZ_CP007198.1/CP007198.1	-	1	2973	2869	6/30/17	7/3/17	Complete Genome	Public Health Agency of Canada	SAMN07124736	GCA_002213825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/825/GCA_002213825.1_ASM221382v1	-	Oct-58
Coxiella burnetii	777	PRJNA277924	277924	Proteobacteria	Gammaproteobacteria	2.21425	42.8	-	JZWL01	5	2512	2158	3/31/15	4/3/17	Contig	Federal Insitute for Risk Assessment	SAMN03400050	GCA_000967075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/075/GCA_000967075.1_ASM96707v1	25953164	NL-Limburg
Lactobacillus casei	1582	PRJNA350868	350868	Terrabacteria group	Firmicutes	2.97771	46.4	-	MODT01	77	3085	2890	4/13/17	4/17/17	Contig	University of Tasmania	SAMN05949208	GCA_002091995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/995/GCA_002091995.1_ASM209199v1	-	GCRL 163
Salinispora arenicola CNT005	1137255	PRJNA169781	169781	Terrabacteria group	Actinobacteria	5.76967	69.6	-	AZWU01	67	5168	4877	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597251	GCA_000514895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/895/GCA_000514895.1_ASM51489v1	-	CNT005
Vibrio harveyi	669	PRJNA257174	257174	Proteobacteria	Gammaproteobacteria	5.69444	45	-	JPTO01	2590	-	-	7/22/15	7/22/15	Contig	Naval Research Laboratory	SAMN02948025	GCA_001185625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/625/GCA_001185625.1_ASM118562v1	-	CAIM461
Listeria monocytogenes serotype 1/2a str. 10-0933	1196169	PRJNA167882	167882	Terrabacteria group	Firmicutes	2.87028	38	chromosome:NZ_CP007199.1/CP007199.1	-	1	2916	2808	6/30/17	7/3/17	Complete Genome	Public Health Agency of Canada	SAMN07124737	GCA_002213845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/845/GCA_002213845.1_ASM221384v1	-	10-0933
Porphyromonas gingivalis JCVI SC001	1195243	PRJNA167667	167667	FCB group	Bacteroidetes/Chlorobi group	2.4264	48.2497	chromosome:CM001843.1	APMB01	1	4808	4708	4/23/13	3/21/15	Chromosome	The J. Craig Venter Institute	SAMN02436407	GCA_000380305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/305/GCA_000380305.1_PgingivalisJCVISC001v1.0	23564253	JCVI SC001
Clostridium botulinum	1491	PRJNA290143	290143	Terrabacteria group	Firmicutes	3.04175	27.9	-	LGVQ01	132	2915	2793	8/11/15	3/26/17	Scaffold	Anses	SAMN03876593	GCA_001264555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/555/GCA_001264555.1_ASM126455v1	26430029	12LNR10-CD
Burkholderia multivorans	87883	PRJEB12783	382508	Proteobacteria	Betaproteobacteria	6.46408	67.1	-	FKJT01	4	6194	5937	4/11/17	7/9/17	Contig	LM-UGent	SAMEA3876904	GCA_900079585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/585/GCA_900079585.1_ASM90007958v1	-	-
Borrelia burgdorferi IPT27	1408863	PRJNA223339	223339	Spirochaetes	Spirochaetia	0.440984	28.1	-	AYBM01	458	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378830	GCA_000501355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/355/GCA_000501355.1_BorBurgIPT27	-	IPT27
Treponema pallidum subsp. pallidum	161	PRJNA322283	322283	Spirochaetes	Spirochaetia	1.13914	52.8	chromosome:NZ_CP016060.1/CP016060.1	-	1	1067	1005	8/25/16	4/5/17	Chromosome	"National Institute of Health, Portugal"	SAMN05150627	GCA_001713155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/155/GCA_001713155.1_ASM171315v1	-	PT_SIF1183
Rhizobium leguminosarum bv. viciae GB30	1041142	PRJNA165299	165299	Proteobacteria	Alphaproteobacteria	7.46846	60.8	-	ATTP01	78	7348	6985	7/9/13	4/1/17	Contig	DOE Joint Genome Institute	SAMN02440922	GCA_000419745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/745/GCA_000419745.1_ASM41974v1	-	GB30
Brucella suis	29461	PRJNA244263	244263	Proteobacteria	Alphaproteobacteria	3.30926	57.2	-	JMUD01	2	3356	3152	8/19/14	4/2/17	Scaffold	Los Alamos National Laboratory	SAMN02777546	GCA_000741995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/995/GCA_000741995.1_ASM74199v1	25237024	BSQ
Enterococcus faecalis DAPTO 512	749489	PRJNA47125	47125	Terrabacteria group	Firmicutes	3.05442	37.3	-	AEBT01	74	3141	3001	9/9/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189099	GCA_000148005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/005/GCA_000148005.1_ASM14800v1	-	DAPTO 512
Borrelia garinii IPT107	1408840	PRJNA223339	223339	Spirochaetes	Spirochaetia	0.485065	28.8	-	AYAP01	493	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378807	GCA_000501715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/715/GCA_000501715.1_BorGarIPT107	-	IPT107
Streptococcus mutans TCI-187	1074148	PRJNA72039	72039	Terrabacteria group	Firmicutes	1.76556	37	-	AGLF01	127	1777	1668	10/6/11	3/22/17	Contig	JCVI	SAMN02436351	GCA_000229285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/285/GCA_000229285.2_SMUT5-NEX_57-187	-	TCI-187
Neisseria gonorrhoeae	485	PRJNA236643	236643	Proteobacteria	Betaproteobacteria	2.17209	52.4	-	JFBA01	130	2521	2208	5/22/14	3/24/17	Contig	Federal Medical and Biological Agency SRI of Physical-Chemical Medicine	SAMN02644628	GCA_000695425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/425/GCA_000695425.1_NG-i19.05	-	i19.05
Enterococcus faecium TX0133B	749524	PRJNA47201	47201	Terrabacteria group	Firmicutes	2.92759	37.7	-	AECI01	199	3035	2889	9/8/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189138	GCA_000148145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/145/GCA_000148145.1_ASM14814v1	-	TX0133B
Chlamydia psittaci C1/97	1112248	PRJNA77069	77069	PVC group	Chlamydiae	1.23823	39.4	-	ATMZ01	208	1081	864	7/2/13	4/10/17	Scaffold	University of Maryland School of Medicine	SAMN00860248	GCA_000417655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/655/GCA_000417655.1_ASM41765v1	-	C1/97
Bacillus amyloliquefaciens	1390	PRJNA236098	236098	Terrabacteria group	Firmicutes	4.17309	45.8	-	LJAU01	86	4171	4022	9/3/15	4/4/17	Contig	NIH	SAMN03983769	GCA_001278635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/635/GCA_001278635.1_ASM127863v1	26607897	Bs006
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.93283	66.2	-	JWFN01	308	4546	4409	7/10/15	3/26/17	Contig	University of Washington	SAMN03196995	GCA_001068535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/535/GCA_001068535.1_ASM106853v1	26230489	1030_SMAL
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15104	41.2	-	CWDW01	83	2096	1910	6/23/15	3/26/17	Contig	SC	SAMEA1032776	GCA_001175445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/445/GCA_001175445.1_6903_7_39	-	EQUI0184
[Haemophilus] parasuis	738	PRJNA301181	301181	Proteobacteria	Gammaproteobacteria	2.19711	39.9	-	MNAU01	130	2123	1925	1/6/17	4/6/17	Scaffold	Chinese Academy of Agricultural Sciences	SAMN04230858	GCA_001938365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/365/GCA_001938365.1_ASM193836v1	-	YT
Pasteurella multocida subsp. multocida	44283	PRJNA244083	244083	Proteobacteria	Gammaproteobacteria	2.40998	40.3	-	JQAH01	35	2295	2197	6/14/15	4/3/17	Contig	Murdoch University	SAMN02721556	GCA_001027695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/695/GCA_001027695.1_ASM102769v1	26151935	TX1
Lactobacillus rhamnosus L35	1390383	PRJNA217082	217082	Terrabacteria group	Firmicutes	2.9374	46.8	-	AYTP01	51	2980	2777	11/17/14	4/2/17	Contig	Baylor College of Medicine	SAMN02324556	GCA_000784395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/395/GCA_000784395.1_L35	25197459	L35
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.3032	57.2357	chromosome 1:NZ_CP018506.1/CP018506.1; chromosome 2:NZ_CP018507.1/CP018507.1	-	2	3372	3137	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932921	GCA_002191435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/435/GCA_002191435.1_ASM219143v1	28388689	BwIM_SOM_36a
Listeria monocytogenes serotype 1/2a str. 10-0934	1196170	PRJNA167883	167883	Terrabacteria group	Firmicutes	2.87028	38	chromosome:NZ_CP007200.1/CP007200.1	-	1	2916	2808	6/30/17	7/3/17	Complete Genome	Public Health Agency of Canada	SAMN07124738	GCA_002213865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/865/GCA_002213865.1_ASM221386v1	-	10-0934
Bordetella bronchiseptica SO10328	1331245	PRJNA202157	202157	Proteobacteria	Betaproteobacteria	5.11684	68.2	-	JGYB01	115	4879	4691	5/12/14	4/2/17	Contig	JCVI	SAMN02231287	GCA_000690015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/015/GCA_000690015.1_gbb49v01	25908122	SO10328
Sinorhizobium meliloti C0431A	1194717	PRJNA167599	167599	Proteobacteria	Alphaproteobacteria	7.08683	62	-	AKZT01	401	7259	5792	8/13/12	5/19/17	Scaffold	University of Florence	SAMN02471762	GCA_000287375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/375/GCA_000287375.1_SMC0431A_v1	23431003	C0431A
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.46669	53.4	-	MLBH01	37	2424	2236	10/13/16	8/3/17	Contig	Institute for Medical Research	SAMN05877644	GCA_001832975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/975/GCA_001832975.1_ASM183297v1	28254972	c110
Listeria monocytogenes serotype 1/2a str. 10-5024	1196192	PRJNA167905	167905	Terrabacteria group	Firmicutes	2.99933	38	chromosome:NZ_CP008837.1/CP008837.1	-	1	3080	2973	6/30/17	7/3/17	Complete Genome	Public Health Agency of Canada	SAMN02725209	GCA_002213905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/905/GCA_002213905.1_ASM221390v1	-	Oct-24
Yersinia enterocolitica	630	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	4.59798	47	-	CQCL01	79	4365	4088	3/22/15	3/26/17	Contig	SC	SAMEA1486377	GCA_001087805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/805/GCA_001087805.1_8016_2_69	-	IP29194
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.15797	41.5	-	JJPJ01	163	3559	3356	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708948	GCA_000979595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/595/GCA_000979595.1_gtlEnvA5udCFS	25756680	3.F.T.1A.2
Leuconostoc mesenteroides subsp. cremoris	33965	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.62399	38	-	MPEH01	105	1741	1406	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981480	GCA_002092495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/495/GCA_002092495.1_ASM209249v1	28217118	LMGCF18
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.16656	39.9	-	FPLY01	8	1061	963	5/10/17	5/24/17	Scaffold	WTSI	SAMEA1094374	GCA_900118775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/775/GCA_900118775.1_7067_6_65	-	10DC85
Serratia marcescens BIDMC 50	1400187	PRJNA219258	219258	Proteobacteria	Gammaproteobacteria	5.12066	59.6	-	JAPC01	4	4849	4682	1/23/14	3/24/17	Scaffold	Broad Institute	SAMN02356590	GCA_000521905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/905/GCA_000521905.1_Serr_marc_BIDMC_50_V1	-	BIDMC 50
Listeria monocytogenes serotype 4b str. 02-6680	1196175	PRJNA167888	167888	Terrabacteria group	Firmicutes	2.908	38	chromosome:NZ_CP007462.1/CP007462.1	-	1	2933	2836	6/30/17	7/3/17	Complete Genome	Public Health Agency of Canada	SAMN07124742	GCA_002213965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/965/GCA_002213965.1_ASM221396v1	-	Feb-80
Mannheimia haemolytica	75985	PRJNA253905	253905	Proteobacteria	Gammaproteobacteria	2.46906	40.8	-	JPIZ01	85	2451	2306	2/24/15	4/3/17	Scaffold	Agricultural Research Council-Onderstepoort Veterinary Institute (ARC-OVI)	SAMN02866377	GCA_000931975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/975/GCA_000931975.1_ASM93197v1	25858825	MH10517
Lactobacillus brevis	1580	PRJNA309616	309616	Terrabacteria group	Firmicutes	2.83215	53.5	-	LTDY01	271	2749	2555	5/2/16	4/10/17	Scaffold	South China University of Technology	SAMN04437151	GCA_001636145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/145/GCA_001636145.1_ASM163614v1	-	BM-LB13908
Campylobacter coli 2685	887318	PRJNA52773	52773	Proteobacteria	delta/epsilon subdivisions	1.71358	31.3	-	AIMO01	103	1797	1709	3/16/12	3/15/17	Contig	Cornell University	SAMN02429056	GCA_000253535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/535/GCA_000253535.2_ASM25353v2	-	2685
Burkholderia sp. A1	148446	PRJNA244293	244293	Proteobacteria	Betaproteobacteria	8.11636	68.5	-	JJMR01	304	7055	6700	4/17/14	4/17/17	Contig	Osaka Ohtani University	SAMN02725052	GCA_000633145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/145/GCA_000633145.1_BrkA1_for_Burkholderia_sp._strain_A1	24831148	A1
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.861	66.9	-	LPCR01	99	6272	5928	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449409	GCA_001528585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/585/GCA_001528585.1_ASM152858v1	-	HI2221
Propionibacterium acnes HL050PA3	765102	PRJNA49239	49239	Terrabacteria group	Actinobacteria	2.47661	60	-	ADZK01	14	2493	2380	7/29/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189225	GCA_000144325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/325/GCA_000144325.1_ASM14432v1	-	HL050PA3
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.46345	32.7	-	CUEB01	79	2428	2290	3/31/15	3/26/17	Contig	SC	SAMEA1035123	GCA_001228325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/325/GCA_001228325.1_7067_4_66	-	51-45
Proteus mirabilis	584	PRJNA308262	308262	Proteobacteria	Gammaproteobacteria	3.90377	38.6	-	LQQZ01	90	3576	3420	4/13/16	4/5/17	Contig	University of Malaya	SAMN04390157	GCA_001619795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/795/GCA_001619795.1_ASM161979v1	-	M16
Enterobacter cloacae BWH 29	1329844	PRJNA201969	201969	Proteobacteria	Gammaproteobacteria	4.87312	55.1	-	AYIR01	6	4809	4553	10/30/13	3/24/17	Scaffold	Broad Institute	SAMN02138594	GCA_000492715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/715/GCA_000492715.1_Ente_cloa_BWH_29_V1	-	BWH 29
Cronobacter sakazakii ES713	1045857	PRJNA68023	68023	Proteobacteria	Gammaproteobacteria	4.55101	56.7	-	AJLB01	156	4473	3995	6/7/13	4/1/17	Contig	FDA	SAMN02952935	GCA_000409385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/385/GCA_000409385.1_Csak713_final_contigs	23724777	ES713
Klebsiella oxytoca	571	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.99122	55	-	JVRA01	275	5738	5489	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197372	GCA_001055635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/635/GCA_001055635.1_ASM105563v1	26230489	181_KOXY
Lactobacillus salivarius	1624	PRJNA321782	321782	Terrabacteria group	Firmicutes	1.96532	32.8	-	LXZA01	96	1955	1803	9/12/17	9/14/17	Contig	Seoul National University	SAMN05003810	GCA_002289875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/875/GCA_002289875.1_ASM228987v1	-	KLW007
Moraxella catarrhalis	480	PRJNA297370	297370	Proteobacteria	Gammaproteobacteria	1.88936	41.6	-	LXHN01	26	1768	1620	6/3/16	4/5/17	Contig	Drexel University College of Medicine	SAMN04122797	GCA_001656455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/455/GCA_001656455.1_ASM165645v1	26912404	N12
Mycobacterium abscessus M154	1162288	PRJNA89603	89603	Terrabacteria group	Actinobacteria	4.7945	64.3	-	AJMA01	40	4754	4628	4/30/12	3/18/17	Contig	"Universiti Malaya, Kuala Lumpur"	SAMN02471414	GCA_000260575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/575/GCA_000260575.2_ASM26057v2	22887675	M154
Bifidobacterium breve	1685	PRJDB4597	325619	Terrabacteria group	Actinobacteria	2.28766	58.9	-	BCXU01	41	2035	1844	6/10/16	4/5/17	Contig	Yakult Central Institute	SAMD00047605	GCA_001685885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/885/GCA_001685885.1_ASM168588v1	27340092	BR-C29
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.18679	36.7	-	LPSD01	18	2309	2180	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305164	GCA_001560485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/485/GCA_001560485.1_NG05B_C06_07	-	NG05B_C06_07
Staphylococcus saprophyticus	29385	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.65292	33	-	LMZI01	93	2619	2436	9/28/16	4/5/17	Scaffold	Tufts University	SAMN04244241	GCA_001747555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/555/GCA_001747555.1_ASM174755v1	-	JBCB14
Vibrio sp. J2-29	1507979	PRJEB5896	284702	Proteobacteria	Gammaproteobacteria	5.6444	44.5	-	CCKH01	117	5013	4861	5/20/15	4/10/17	Contig	STATION BIOLOGIQUE DE ROSCOFF	SAMEA2594004	GCA_001048655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/655/GCA_001048655.1_VRSK29v1_PRJEB5896	-	J2-29
Pseudomonas stutzeri	316	PRJNA355021	355021	Proteobacteria	Gammaproteobacteria	4.08535	64.5	-	MQMM01	17	3840	3718	2/13/17	2/22/17	Scaffold	University of Illinois Urbana-Champaign	SAMN06060101	GCA_001996325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/325/GCA_001996325.1_ASM199632v1	-	DCP-Ps1
Aeromonas hydrophila	644	PRJNA302467	302467	Proteobacteria	Gammaproteobacteria	4.96786	60.9	-	LRRV01	13	4596	4409	3/31/16	4/5/17	Contig	Mississippi State University	SAMN04274131	GCA_001604835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/835/GCA_001604835.1_ASM160483v1	-	AL09-79
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.92245	67.2	-	LOVU01	123	7171	6804	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449211	GCA_001523855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/855/GCA_001523855.1_ASM152385v1	-	ABCPW-28
Flavobacterium psychrophilum	96345	PRJEB21067	396411	FCB group	Bacteroidetes/Chlorobi group	2.68976	32.4	-	FYCF01	41	2423	2339	7/29/17	8/7/17	Contig	INRA	SAMEA104125235	GCA_900186425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/425/GCA_900186425.1_FPDK002_V1	-	DK002
Escherichia albertii B156	550693	PRJNA38903	38903	Proteobacteria	Gammaproteobacteria	5.02305	49.6	-	ADJH01	25	5139	4770	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392851	GCA_002109845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/845/GCA_002109845.1_ASM210984v1	-	B156
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.73848	47.6	-	MDZX01	76	3440	3271	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320399	GCA_001883245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/245/GCA_001883245.1_ASM188324v1	-	95/6654-1
Pectobacterium carotovorum subsp. carotovorum	555	PRJNA269222	269222	Proteobacteria	Gammaproteobacteria	4.77775	52	-	JUJH01	31	4364	4188	12/29/14	4/2/17	Scaffold	Beijing Academy of Agriculture and Forestry Sciences	SAMN03252603	GCA_000808255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/255/GCA_000808255.1_ASM80825v1	-	YC D46
Lactobacillus crispatus	47770	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.03974	37	-	LYRB01	73	2080	1865	7/14/17	7/17/17	Scaffold	University of Minnesota	SAMN04498983	GCA_002218815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/815/GCA_002218815.1_ASM221881v1	-	UMNLC11
Aggregatibacter actinomycetemcomitans serotype b str. SCC4092	1167009	PRJNA91105	91105	Proteobacteria	Gammaproteobacteria	2.09957	44.6	-	AJMF02	31	2063	1883	1/24/13	4/4/17	Scaffold	"Bumgarner laboratory, Department of Microbiology, University of Washington"	SAMN02471977	GCA_000332935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/935/GCA_000332935.2_AaSCC4092v2.0	23194436	SCC4092
Gardnerella vaginalis 75712	698951	PRJNA42435	42435	Terrabacteria group	Actinobacteria	1.67297	41.3	-	ADEM01	3	1418	1306	5/21/12	3/30/17	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393774	GCA_000263535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/535/GCA_000263535.1_ASM26353v1	-	75712
Lactobacillus paracasei subsp. paracasei CNCM I-4649	1256211	PRJNA178439	178439	Terrabacteria group	Firmicutes	2.98101	46.2	-	ANKH01	665	3279	2641	6/11/13	4/10/17	Contig	Danone Research	SAMN02469704	GCA_000410435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/435/GCA_000410435.1_ASM41043v1	23894338	CNCM I-4649
Staphylococcus hominis	1290	PRJNA319366	319366	Terrabacteria group	Firmicutes	2.41577	31.5	-	MIZV01	500	2288	2175	9/24/16	4/5/17	Scaffold	"Jet Propulsion Laboratory, California Institute of Technology"	SAMN04902360	GCA_001743355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/743/355/GCA_001743355.1_ASM174335v1	-	IIF4SC-B9
Staphylococcus capitis	29388	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.54034	32.8	-	JUZS01	63	2433	2351	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197822	GCA_001073605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/605/GCA_001073605.1_ASM107360v1	26230489	622_SHAE
Rhodococcus hoagii	43767	PRJNA316970	316970	Terrabacteria group	Actinobacteria	5.08316	68.9	-	LWHR01	45	4686	4588	4/18/17	6/6/17	Contig	The University of Edinburgh	SAMN04849237	GCA_002095295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/295/GCA_002095295.1_ASM209529v1	27638249	PAM1637
Klebsiella variicola	244366	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	6.29392	56.4	-	NPGY01	208	6534	6065	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07345001	GCA_002264565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/565/GCA_002264565.1_ASM226456v1	-	K2631
Acinetobacter nosocomialis	106654	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.93037	38.7	-	LYKE01	44	3732	3580	11/2/16	4/5/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745420	GCA_001864205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/205/GCA_001864205.1_ASM186420v1	-	XH653
Streptococcus oralis	1303	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.04309	41.1	-	JVPZ01	28	2007	1913	7/10/15	4/3/17	Contig	University of Washington	SAMN03197399	GCA_001071755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/755/GCA_001071755.1_ASM107175v1	26230489	206_SPSE
Listeria monocytogenes serotype 4b str. 81-0558	1196159	PRJNA167872	167872	Terrabacteria group	Firmicutes	2.97154	38	chromosome:NZ_CP007525.1/CP007525.1	-	1	3019	2915	6/30/17	7/3/17	Complete Genome	Public Health Agency of Canada	SAMN02713777	GCA_002213985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/985/GCA_002213985.1_ASM221398v1	-	81-0558
Pseudoalteromonas sp. P1-7a	1723755	PRJNA294442	294442	Proteobacteria	Gammaproteobacteria	4.37456	40.8	-	LKDU01	189	3927	3798	10/21/15	4/11/17	Contig	Hans Knoell Institute	SAMN04025688	GCA_001401855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/855/GCA_001401855.1_ASM140185v1	26679587	P1-7a
Listeria monocytogenes serotype 4b str. 81-0592	1196160	PRJNA167873	167873	Terrabacteria group	Firmicutes	2.97586	38	chromosome:NZ_CP007526.1/CP007526.1	-	1	3025	2922	6/30/17	7/3/17	Complete Genome	Public Health Agency of Canada	SAMN02713778	GCA_002214005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/005/GCA_002214005.1_ASM221400v1	-	81-0592
Enterobacter asburiae	61645	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.51665	55.1	-	LRJA01	144	5642	5304	1/22/16	4/4/17	Contig	JCVI	SAMN04431012	GCA_001525135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/135/GCA_001525135.1_ASM152513v1	-	EC_287
Brucella sp. CMUL 030	1927133	PRJNA357019	357019	Proteobacteria	Alphaproteobacteria	3.29471	57.2	-	MRUO01	44	3381	3130	5/19/17	5/24/17	Contig	LAU	SAMN06131426	GCA_002150345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/345/GCA_002150345.1_ASM215034v1	-	CMUL 030
Pseudomonas amygdali pv. aesculi	251722	PRJNA287460	287460	Proteobacteria	Gammaproteobacteria	6.19709	58.3	-	LILH01	319	5978	5339	1/25/16	4/4/17	Contig	University of Edinburgh	SAMN03989044	GCA_001538045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/045/GCA_001538045.1_ASM153804v1	27145446	2279
Xanthomonas euvesicatoria	456327	PRJNA275491	275491	Proteobacteria	Gammaproteobacteria	5.30344	64.5	-	JZLS01	123	4775	4354	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03349325	GCA_001009045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/045/GCA_001009045.1_v1	26089818	376
Acinetobacter pittii	48296	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.99325	38.8	-	LLHD01	229	3930	3720	10/27/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145722	GCA_001415585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/585/GCA_001415585.1_ASM141558v1	-	ABBL103
Leptospira santarosai	28183	PRJNA360567	360567	Spirochaetes	Spirochaetia	4.2058	41.7	-	MTSU01	45	4215	3857	2/1/17	4/6/17	Contig	School of Veterinary Medicine and Animal Science / University of Sao Paulo	SAMN06212384	GCA_001981505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/505/GCA_001981505.1_ASM198150v1	-	M52/8-19
Citrobacter freundii GTC 09629	1297584	PRJNA190645	190645	Proteobacteria	Gammaproteobacteria	5.05389	51.8	-	AOUE01	79	5052	4792	5/3/13	4/1/17	Contig	"Institute of Microbial Technology (IMTECH), Chandigarh, India 160036"	SAMN02469849	GCA_000388155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/155/GCA_000388155.1_Whole_genome_assembly	-	GTC 09629
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.04638	55	-	LABC01	77	5032	4780	3/19/15	3/25/17	Contig	JCVI	SAMN03283316	GCA_000956645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/645/GCA_000956645.1_ASM95664v1	-	28131
Vibrio anguillarum	55601	PRJNA267085	267085	Proteobacteria	Gammaproteobacteria	4.182	44.8456	chromosome I:CP011464.1; chromosome II:CP011465.1	-	2	3501	3393	2/14/17	2/14/17	Chromosome	University of Copenhagen	SAMN03177770	GCA_001997225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/225/GCA_001997225.1_ASM199722v1	-	PF7
Kingella kingae KK6	1305789	PRJEB1643	194505	Proteobacteria	Betaproteobacteria	1.99127	46.8	-	CBSC01	1	2006	1789	9/10/13	4/2/17	Scaffold	URMITE	SAMEA2272499	GCA_000470675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/675/GCA_000470675.1_ASM47067v1	-	KK6
Streptococcus pseudopneumoniae ATCC BAA-960 = CCUG 49455	889205	PRJNA302716	302716	Terrabacteria group	Firmicutes	2.17262	39.9	-	MWSM01	86	2371	2089	4/11/17	5/31/17	Scaffold	TAILORED-Treatment project	SAMN06459226	GCA_002087075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/075/GCA_002087075.1_ASM208707v1	-	CCUG 49455
Xanthomonas perforans	442694	PRJNA276618	276618	Proteobacteria	Gammaproteobacteria	5.24879	64.6	-	JZVJ01	13	4537	4113	5/18/15	6/16/15	Contig	Universidade de Sao Paulo	SAMN03378983	GCA_001009785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/785/GCA_001009785.1_ASM100978v1	26089818	Xp2010
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.35205	55	-	JZZZ01	99	5314	5052	3/19/15	4/6/17	Contig	JCVI	SAMN03283613	GCA_000957725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/725/GCA_000957725.1_ASM95772v1	-	35006
Aeromonas veronii	654	PRJNA329585	329585	Proteobacteria	Gammaproteobacteria	4.4817	58.8	-	NJGB01	54	4142	3979	7/5/17	7/7/17	Scaffold	North-West University	SAMN07252140	GCA_002214865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/865/GCA_002214865.1_ASM221486v1	-	A29
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98908	64.1	-	FVFW01	18	4945	4801	3/10/17	3/18/17	Contig	SC	SAMEA2068957	GCA_900132745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/745/GCA_900132745.1_10250_1_23	-	363
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.73786	66.5	-	LOUP01	129	8115	7666	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449177	GCA_001522985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/985/GCA_001522985.1_ASM152298v1	-	INT3-BP157
Streptococcus sobrinus TCI-384	1074086	PRJNA71939	71939	Terrabacteria group	Firmicutes	2.12548	43.4	-	AGHI01	196	2097	1911	10/6/11	3/30/17	Contig	JCVI	SAMN02436624	GCA_000228445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/445/GCA_000228445.2_SMUT2-NEX_34-384	-	TCI-384
Mycobacterium chelonae	1774	PRJNA323571	323571	Terrabacteria group	Actinobacteria	4.99699	64.1	-	MAEQ01	49	4937	4801	3/3/17	3/6/17	Contig	LNCC	SAMN05186769	GCA_002013595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/595/GCA_002013595.1_ASM201359v1	-	96-1705
Salinispora pacifica CNT569	1137263	PRJNA169786	169786	Terrabacteria group	Actinobacteria	5.23469	69.2	-	AZWQ01	39	4863	4512	1/3/14	4/11/17	Scaffold	DOE Joint Genome Institute	SAMN02597247	GCA_000514815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/815/GCA_000514815.1_ASM51481v1	-	CNT569
Elizabethkingia anophelis	1117645	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	4.00333	35.5	-	MAHP01	38	3706	3595	3/8/17	3/10/17	Contig	CDC	SAMN05275369	GCA_002023695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/695/GCA_002023695.1_ASM202369v1	-	CSID_3015183680
Pseudomonas sp. R62	1144884	PRJNA82847	82847	Proteobacteria	Gammaproteobacteria	6.58357	58.9	-	AHZM01	192	5773	4960	4/4/12	5/24/17	Scaffold	Botanical Institute	SAMN02471581	GCA_000257605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/605/GCA_000257605.1_ASM25760v1	22628504	R62
Streptomyces sp. e14	645465	PRJNA38051	38051	Terrabacteria group	Actinobacteria	7.92895	70.3	-	ACUR01	13	6539	5445	3/22/10	5/19/17	Scaffold	Broad Institute	SAMN02595349	GCA_000162775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/775/GCA_000162775.1_ASM16277v1	-	e14
Paeniclostridium sordellii	1505	PRJEB8155	277679	Terrabacteria group	Firmicutes	3.492	27.3	-	CDNP01	32	3406	3298	3/13/15	4/4/17	Contig	WTSI	SAMEA1572095	GCA_001372975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/975/GCA_001372975.1_UMC178	-	UMC178
Acinetobacter sp. CIP 51.11	1144670	PRJNA183232	183232	Proteobacteria	Gammaproteobacteria	3.14376	43.2	-	APRU01	5	2973	2793	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01828134	GCA_000369665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/665/GCA_000369665.1_Acin_sp_CIP_51_11_V1	-	CIP 51.11
Klebsiella sp. NFIX12	1566181	PRJEB16646	349926	Proteobacteria	Gammaproteobacteria	5.21436	58.2	-	FNQI01	19	5115	4883	10/22/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159374	GCA_900107525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/525/GCA_900107525.1_IMG-taxon_2602042053_annotated_assembly	-	NFIX12
Flavobacterium sp. TH167	2023067	PRJNA396029	396029	FCB group	Bacteroidetes/Chlorobi group	3.24718	40.4	-	NOXX01	228	3020	2900	8/14/17	8/16/17	Scaffold	Nanjing Institute of Geography and Limnology	SAMN07419339	GCA_002251775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/775/GCA_002251775.1_ASM225177v1	-	TH167
Bacillus sp. UNC438CL73TsuS30	1340434	PRJNA205973	205973	Terrabacteria group	Firmicutes	5.60597	38.9	-	AXVA01	40	5547	5288	10/25/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441109	GCA_000482325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/325/GCA_000482325.1_ASM48232v1	-	UNC438CL73TsuS30
Clostridium sp. HGF2	908340	PRJNA54027	54027	Terrabacteria group	Firmicutes	4.09985	43.9	-	AENW01	60	4018	3856	11/30/10	4/17/17	Contig	J. Craig Venter Institute	SAMN00116782	GCA_000183585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/585/GCA_000183585.2_ASM18358v1	-	HGF2
Sphingomonas sp. PAMC 26621	1112213	PRJNA76637	76637	Proteobacteria	Alphaproteobacteria	4.76993	65.5	-	AIDW01	68	4508	4171	3/7/12	5/19/17	Contig	korea Polar Research Institute	SAMN02470168	GCA_000251145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/145/GCA_000251145.2_ASM25114v2	22582384	PAMC 26621
Synechococcus sp. WH 8016	166318	PRJNA61805	61805	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.69484	54.1	-	AGIK01	16	2875	2784	10/14/11	4/17/17	Contig	JGI	SAMN02261394	GCA_000230675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/675/GCA_000230675.2_ASM23067v1	-	WH 8016
Rhodococcus sp. Leaf258	1736310	PRJNA297956	297956	Terrabacteria group	Actinobacteria	4.70962	68.4	-	LMRQ01	19	4412	4293	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151700	GCA_001426065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/065/GCA_001426065.1_Leaf258	26633631	Leaf258
Enterobacter sp. MGH 2	1329811	PRJNA201917	201917	Proteobacteria	Gammaproteobacteria	5.27193	54.9	-	JCLV01	9	5241	4955	2/3/14	4/2/17	Scaffold	Broad Institute	SAMN02138542	GCA_000534775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/775/GCA_000534775.1_Ente_cloa_complex_MGH_2_V2	-	MGH 2
Staphylococcus sp. HMSC069D07	1715196	PRJNA296324	296324	Terrabacteria group	Firmicutes	2.40787	32.7	-	LTIE01	95	2344	2253	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477552	GCA_001810245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/245/GCA_001810245.1_ASM181024v1	-	HMSC069D07
Corynebacterium sp. HMSC06C06	1581121	PRJNA269890	269890	Terrabacteria group	Actinobacteria	2.65222	59.4	-	LWOF01	74	2461	2326	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03433349	GCA_001807295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/295/GCA_001807295.1_ASM180729v1	-	HMSC06C06
Arthrobacter sp. Soil764	1736403	PRJNA298127	298127	Terrabacteria group	Actinobacteria	4.3464	65.8	-	LMSI01	25	4034	3901	11/2/15	4/11/17	Scaffold	ETH Zurich	SAMN04155668	GCA_001428075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/075/GCA_001428075.1_Soil764	26633631	Soil764
Bradyrhizobium sp. Tv2a-2	113395	PRJNA165315	165315	Proteobacteria	Alphaproteobacteria	8.49628	62.2	-	AXAI01	87	7955	7609	9/30/13	4/17/17	Contig	DOE Joint Genome Institute	SAMN02440785	GCA_000472425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/425/GCA_000472425.1_ASM47242v1	-	Tv2a-2
Streptococcus sp. HMSC074F10	1715182	PRJNA296310	296310	Terrabacteria group	Firmicutes	2.05477	35.3	-	LTKY01	38	2089	1988	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477546	GCA_001808795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/795/GCA_001808795.1_ASM180879v1	-	HMSC074F10
Mycobacterium sp. MAC_011194_8550	1335321	PRJNA203576	203576	Terrabacteria group	Actinobacteria	5.39383	69	-	JAOR01	167	5156	4851	1/27/14	4/9/17	Contig	Institute for Genome Sciences	SAMN02641624	GCA_000523635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/635/GCA_000523635.1_ASM52363v1	-	MAC_011194_8550
Prevotella sp. P5-64	2024226	PRJNA396820	396820	FCB group	Bacteroidetes/Chlorobi group	3.15562	51.5	-	NPJK01	78	2744	2609	8/14/17	8/16/17	Contig	University of Ljubljana	SAMN07431217	GCA_002251285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/285/GCA_002251285.1_ASM225128v1	-	P5-64
Enterococcus sp. HMSC070F12	1715147	PRJNA296275	296275	Terrabacteria group	Firmicutes	2.93308	37.7	-	LTOX01	303	3022	2852	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498640	GCA_001837605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/605/GCA_001837605.1_ASM183760v1	-	HMSC070F12
Methylobacterium sp. Leaf91	1736247	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	5.26038	65.9	-	LMMP01	52	4907	4689	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151627	GCA_001422815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/815/GCA_001422815.1_Leaf91	26633631	Leaf91
Nocardioides sp. REDSEA-S25_B9	1811550	PRJNA289734	289734	Terrabacteria group	Actinobacteria	2.25033	71.4	-	LUPG01	485	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534608	GCA_001627155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/155/GCA_001627155.1_ASM162715v1	27377622	-
Acidovorax sp. SCN 68-22	1660087	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	2.93901	67.7	-	MEDL01	223	2825	2565	9/13/16	9/13/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03652431	GCA_001724785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/785/GCA_001724785.1_ASM172478v1	26031303	-
Eubacterium sp. CAG76_36_125	1897026	PRJNA321218	321218	Terrabacteria group	Firmicutes	2.61615	35.9	-	MNSL01	28	2339	2234	12/23/16	12/23/16	Scaffold	None	SAMN05717269	GCA_001916455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/455/GCA_001916455.1_ASM191645v1	27819664	-
Paenibacillus sp. A9	1284352	PRJNA186663	186663	Terrabacteria group	Firmicutes	5.48568	46.5	-	AOIG01	67	4794	4704	3/14/13	5/19/17	Contig	Northeastern University	SAMN02470704	GCA_000346635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/635/GCA_000346635.1_Paenibacillus_A9	23618713	A9
Ruminococcus sp. A254.MGS-108	1637497	PRJNA277012	277012	Terrabacteria group	Firmicutes	1.94286	41.6	-	LAQZ01	132	-	-	4/24/15	6/10/15	Contig	The Mayo Clinic	SAMN03449993	GCA_000980315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/315/GCA_000980315.1_ASM98031v1	26021920	-
Thioalkalivibrio sp. ALMg13-2	1158167	PRJNA182457	182457	Proteobacteria	Gammaproteobacteria	3.01825	65.9	-	ARLK01	64	2965	2758	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440481	GCA_000381185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/185/GCA_000381185.1_ASM38118v1	-	ALMg13-2
Bacteroides sp. An322	1965632	PRJNA377666	377666	FCB group	Bacteroidetes/Chlorobi group	3.43269	44.8	-	NFIN01	80	2943	2772	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473719	GCA_002161765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/765/GCA_002161765.1_ASM216176v1	-	An322
Prochlorococcus sp. W3	569152	PRJNA169362	169362	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.339045	30.7	-	ALPC01	197	-	-	8/20/12	7/29/15	Contig	Massachusetts Institute of Technology	SAMN02470511	GCA_000291905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/905/GCA_000291905.1_ProW3_v1.0	22895163	-
Actinomyces sp. S6-Spd3	1284680	PRJNA187458	187458	Terrabacteria group	Actinobacteria	2.09101	56.9	-	JRMV01	281	1792	1687	9/26/14	4/9/17	Contig	JCVI	SAMN02850923	GCA_000758755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/755/GCA_000758755.1_04_NF40_HMP1627v01	-	S6-Spd3
Campylobacter sp. BCW_6877	1903290	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.86661	29.9	-	MJWW01	65	1964	1789	10/4/16	4/13/17	Scaffold	University of California at Davis	SAMN03360224	GCA_001762445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/445/GCA_001762445.1_ASM176244v1	-	BCW_6877
Neisseria sp. HMSC067H09	1739458	PRJNA300108	300108	Proteobacteria	Betaproteobacteria	2.4056	51.2	-	LTYS01	122	2353	2160	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480378	GCA_001814135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/135/GCA_001814135.1_ASM181413v1	-	HMSC067H09
Rothia sp. HMSC064F07	1715191	PRJNA296319	296319	Terrabacteria group	Actinobacteria	2.26762	59.5	-	LTPN01	12	1786	1693	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498655	GCA_001837265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/265/GCA_001837265.1_ASM183726v1	-	HMSC064F07
Halomonas sp. BC1	1670448	PRJNA286903	286903	Proteobacteria	Gammaproteobacteria	3.89002	59.5	-	LFGS01	20	3606	3286	4/3/17	4/5/17	Scaffold	Procter & Gamble Company 	SAMN03775259	GCA_002078135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/135/GCA_002078135.1_ASM207813v1	26888357	BC1
Rhizobium sp. PDO1-076	1125979	PRJNA78831	78831	Proteobacteria	Alphaproteobacteria	5.505	60.2	-	AHZC01	441	5303	4896	2/8/12	5/19/17	Contig	Oak Ridge National Laboratory	SAMN02470738	GCA_000247475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/475/GCA_000247475.2_ASM24747v2	22493196	PDO-076
Methylophaga sp. UBA4204	1946892	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.04959	44.1	-	DFTU01	109	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455421	GCA_002379485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/485/GCA_002379485.1_ASM237948v1	28894102	-
Chryseobacterium sp. MOF25P	1664318	PRJNA286099	286099	FCB group	Bacteroidetes/Chlorobi group	4.66121	33.6	-	LFEG01	310	4288	4138	7/1/16	4/13/17	Contig	Cefas	SAMN03764887	GCA_001677935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/935/GCA_001677935.1_ASM167793v1	-	MOF25P
Mesorhizobium sp. LNJC395A00	1287275	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.33524	62.6	-	AYWG01	60	6209	5738	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359674	GCA_000502575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/575/GCA_000502575.1_Mloti_LNJC395A00	-	LNJC395A00
Variovorax sp. JGI 0001016-M12	1286832	PRJNA187225	187225	Proteobacteria	Betaproteobacteria	2.25602	65.8	-	AXXG01	103	-	-	10/25/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441094	GCA_000483005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/005/GCA_000483005.1_ASM48300v1	-	JGI 0001016-M12
Xanthomonas translucens	343	PRJNA302486	302486	Proteobacteria	Gammaproteobacteria	4.54448	67.8	-	LNSZ01	506	4085	3491	1/27/16	4/4/17	Scaffold	Kansas State University	SAMN04279073	GCA_001542205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/205/GCA_001542205.1_ASM154220v1	-	B2
Hyphomonas sp. UBA4494	1946631	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.40781	58.6	-	DGNK01	42	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450409	GCA_002388935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/935/GCA_002388935.1_ASM238893v1	28894102	-
Microbacterium sp. CF335	1500279	PRJNA247513	247513	Terrabacteria group	Actinobacteria	3.01895	70.8	-	JUGQ01	4	2840	2764	12/9/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02787151	GCA_000799385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/385/GCA_000799385.1_ASM79938v1	-	CF335
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.8552	58.9	-	LNXH01	49	4632	4504	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339872	GCA_001681895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/895/GCA_001681895.1_ASM168189v1	-	S2405
Butyrivibrio sp. TB	1520809	PRJEB16993	351111	Terrabacteria group	Firmicutes	4.4077	39.6	-	FOER01	56	3789	3622	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910382	GCA_900110805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/805/GCA_900110805.1_IMG-taxon_2593339242_annotated_assembly	-	TB
Sphingopyxis sp. GW247-27LB	2012632	PRJNA390430	390430	Proteobacteria	Alphaproteobacteria	4.79154	66	-	NIWD01	20	4570	4416	8/29/17	8/30/17	Scaffold	Lawrence Berkeley National Laboratory	SAMN07230139	GCA_002277025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/025/GCA_002277025.1_ASM227702v1	-	GW247-27LB
Listeria monocytogenes serotype 1/2a str. 10-0814	1196187	PRJNA167900	167900	Terrabacteria group	Firmicutes	2.99931	38	chromosome:NZ_CP008836.1/CP008836.1	-	1	3080	2972	6/30/17	7/3/17	Complete Genome	Public Health Agency of Canada	SAMN02873948	GCA_002214045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/045/GCA_002214045.1_ASM221404v1	-	10-0814
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.53748	34.9	-	LZHD01	107	2494	2315	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179600	GCA_001690835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/835/GCA_001690835.1_ASM169083v1	-	Bim1-2
Klebsiella michiganensis	1134687	PRJNA184698	184698	Proteobacteria	Gammaproteobacteria	6.58211	55.5	-	MTLK01	256	6478	6181	6/14/17	6/19/17	Contig	Georgia Institute of Technology	SAMN06009455	GCA_002192755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/755/GCA_002192755.1_ASM219275v1	-	DPB_3
Achromobacter sp. 2789STDY5608607	1806497	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	6.16751	67.7	-	CYSX01	26	5618	5471	9/19/15	4/11/17	Scaffold	SC	SAMEA2247572	GCA_001299135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/135/GCA_001299135.1_11861_6_2	-	2789STDY5608607
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.21593	51.4	-	MPQP01	145	2269	2091	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016262	GCA_002020605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/605/GCA_002020605.1_ASM202060v1	-	-
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.7972	32.3	-	FQLC01	16	2801	2626	11/23/16	4/5/17	Contig	SC	SAMEA3449117	GCA_900126855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/855/GCA_900126855.1_17175_3_61	-	3688STDY6125115
Klebsiella quasipneumoniae	1463165	PRJNA385274	385274	Proteobacteria	Gammaproteobacteria	5.37812	57.8	-	NEWB01	47	5422	5131	6/19/17	6/22/17	Contig	Monash University Malaysia	SAMN06885982	GCA_002197675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/675/GCA_002197675.1_Kquasi_MGF005v1	-	MGF005
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.86896	67.5	-	LPKS01	112	7067	6706	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449625	GCA_001533065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/065/GCA_001533065.1_ASM153306v1	-	MSMB659WGS
Xanthomonas axonopodis pv. manihotis str. IBSBF 289	1185692	PRJNA163779	163779	Proteobacteria	Gammaproteobacteria	4.84753	65.1	-	AKDX01	155	4309	3968	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090328	GCA_000266225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/225/GCA_000266225.1_IBSBF289	22699502	IBSBF 289
Xanthomonas axonopodis pv. manihotis str. IBSBF 725	1185698	PRJNA163791	163791	Proteobacteria	Gammaproteobacteria	4.88652	65.2	-	AKED01	141	4337	4030	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090334	GCA_000266245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/245/GCA_000266245.1_IBSBF725	22699502	IBSBF 725
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.52623	67.6	-	LPKP01	90	6853	6490	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449622	GCA_001533075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/075/GCA_001533075.1_ASM153307v1	-	MSMB656WGS
Fibrobacter sp. UBA4223	1946534	PRJNA348753	348753	FCB group	Fibrobacteres	2.15014	51.6	-	DFTB01	18	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455664	GCA_002382975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/975/GCA_002382975.1_ASM238297v1	28894102	-
Klebsiella quasipneumoniae	1463165	PRJNA385274	385274	Proteobacteria	Gammaproteobacteria	5.37608	57.8	-	NEWC01	50	5432	5132	6/19/17	6/22/17	Contig	Monash University Malaysia	SAMN06886016	GCA_002197725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/725/GCA_002197725.1_Kquasi_MGF008v1	-	MGF008
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.87905	32.4	-	FQLY01	23	2936	2762	11/23/16	4/6/17	Contig	SC	SAMEA3449120	GCA_900126865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/865/GCA_900126865.1_17175_3_64	-	3688STDY6125118
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.69815	50.9	-	MPQQ01	50	2622	2528	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016263	GCA_002020635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/635/GCA_002020635.1_ASM202063v1	-	-
Achromobacter sp. 2789STDY5608629	1806487	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	6.49461	67.6	-	CYSW01	33	5951	5781	9/19/15	4/11/17	Scaffold	SC	SAMEA2247594	GCA_001299155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/155/GCA_001299155.1_11861_6_22	-	2789STDY5608629
Klebsiella michiganensis	1134687	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	6.13581	55.9	-	NPHU01	84	5988	5680	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07344979	GCA_002265195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/195/GCA_002265195.1_ASM226519v1	-	K1439
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.37199	34.4	-	LZHM01	113	2185	2030	7/21/16	4/5/17	Contig	University of Texas at Austin	SAMN05179622	GCA_001690875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/875/GCA_001690875.1_ASM169087v1	-	wkB18
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.9666	38	chromosome:NZ_CP020827.1/CP020827.1	-	1	3033	2917	4/24/17	4/26/17	Complete Genome	FDA/CFSAN	SAMN03285109	GCA_002105615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/615/GCA_002105615.1_ASM210561v1	-	CFSAN028538
Listeria monocytogenes	1639	PRJNA212117	212117	Terrabacteria group	Firmicutes	2.9122	38	chromosome:NZ_CP020831.1/CP020831.1	-	1	2948	2799	4/24/17	4/26/17	Complete Genome	"Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention"	SAMN02351401	GCA_002105675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/675/GCA_002105675.1_ASM210567v1	-	PNUSAL000144
Butyrivibrio sp. YAB3001	1520812	PRJEB17137	351311	Terrabacteria group	Firmicutes	4.5879	38.7	-	FOKR01	56	4082	3899	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910398	GCA_900112195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/195/GCA_900112195.1_IMG-taxon_2595698243_annotated_assembly	-	YAB3001
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.78838	58.8	-	LNXI01	67	4588	4450	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339873	GCA_001681905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/905/GCA_001681905.1_ASM168190v1	-	S2608
Microbacterium sp. ZOR0019	1339233	PRJNA205577	205577	Terrabacteria group	Actinobacteria	3.73222	68.3	-	JRKC01	120	3617	3474	12/11/14	4/9/17	Contig	University of Oregon	SAMN03021530	GCA_000800925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/925/GCA_000800925.1_ZOR0019.1	-	ZOR0019
Hyphomonas sp. UBA4484	1946630	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	3.44683	58.4	-	DGNU01	14	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455155	GCA_002389085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/085/GCA_002389085.1_ASM238908v1	28894102	-
Xanthomonas translucens pv. arrhenatheri	320326	PRJNA319535	319535	Proteobacteria	Gammaproteobacteria	4.76494	68.3	-	LWSX01	134	3928	3679	6/8/16	4/5/17	Scaffold	The Connecticut Agricultural Experiment Station	SAMN04893617	GCA_001659895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/895/GCA_001659895.1_ASM165989v1	-	UPB455
Variovorax sp. JGI 0001013-M04	1279036	PRJNA185348	185348	Proteobacteria	Betaproteobacteria	0.95515	66.2	-	AXXS01	72	-	-	10/25/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441096	GCA_000483145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/145/GCA_000483145.1_ASM48314v1	-	JGI 0001013-M04
Mesorhizobium sp. LNJC399B00	1287277	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.52953	62.5	-	AYWE01	40	6358	5966	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359676	GCA_000502595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/595/GCA_000502595.1_Mloti_LNJC399B00	-	LNJC399B00
Chryseobacterium sp. BGARF1	1664319	PRJNA286103	286103	FCB group	Bacteroidetes/Chlorobi group	4.67502	33.6	-	LELA01	260	4299	4152	7/1/16	4/13/17	Contig	Cefas	SAMN03764910	GCA_001677955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/955/GCA_001677955.1_ASM167795v1	-	BGARF1
Methylophaga sp. UBA3991	1946890	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.01209	43.3	-	DGBZ01	56	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451730	GCA_002384405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/405/GCA_002384405.1_ASM238440v1	28894102	-
Rhizobium sp. CF142	1144314	PRJNA83051	83051	Proteobacteria	Alphaproteobacteria	7.45709	60.2	-	AJWE01	150	7280	6993	7/24/12	5/19/17	Contig	Oak Ridge National Lab	SAMN00839622	GCA_000281145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/145/GCA_000281145.1_Rhizobium.strCF142_v1.0	23045501	CF142
Rothia sp. HMSC065C03	1715084	PRJNA296212	296212	Terrabacteria group	Actinobacteria	2.35277	59.4	-	LTPL01	42	1839	1757	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498657	GCA_001837295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/295/GCA_001837295.1_ASM183729v1	-	HMSC065C03
Neisseria sp. HMSC070F02	1739463	PRJNA300113	300113	Proteobacteria	Betaproteobacteria	1.98624	51.9	-	LTVF01	168	2203	1957	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480382	GCA_001814225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/225/GCA_001814225.1_ASM181422v1	-	HMSC070F02
Campylobacter sp. BCW_6878	1903291	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.86209	30.1	-	MJWX01	114	1962	1765	10/4/16	4/13/17	Scaffold	University of California at Davis	SAMN03360225	GCA_001762495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/495/GCA_001762495.1_ASM176249v1	-	BCW_6878
Actinomyces sp. S4-C9	1219581	PRJNA187459	187459	Terrabacteria group	Actinobacteria	1.95563	56.2	-	JRMU01	30	1720	1647	9/26/14	4/17/17	Contig	JCVI	SAMN02850924	GCA_000758775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/775/GCA_000758775.1_04_NF40_HMP1628v01	-	S4-C9
Prochlorococcus sp. W9	613200	PRJNA169366	169366	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.42015	30.7	-	ALPG01	211	-	-	8/20/12	7/29/15	Contig	Massachusetts Institute of Technology	SAMN02470491	GCA_000291925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/925/GCA_000291925.1_ProW9_v1.0	22895163	-
Bacteroides sp. Marseille-P3108	1903262	PRJEB16738	350432	FCB group	Bacteroidetes/Chlorobi group	4.94927	47.7	-	FNVV01	14	4166	3969	10/26/16	4/13/17	Contig	URMITE	SAMEA4523114	GCA_900108345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/345/GCA_900108345.1_PRJEB16738	-	Marseille-P3108
Thioalkalivibrio sp. ALE11	1265494	PRJNA182459	182459	Proteobacteria	Gammaproteobacteria	2.98504	67.3	-	ARLL01	55	2839	2692	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440987	GCA_000381205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/205/GCA_000381205.1_ASM38120v1	-	ALE11
Ruminococcus sp. 37_24	1897019	PRJNA321218	321218	Terrabacteria group	Firmicutes	2.68137	36.8	-	MNTP01	61	2653	2493	12/23/16	12/23/16	Scaffold	None	SAMN05717299	GCA_001917035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/035/GCA_001917035.1_ASM191703v1	27819664	-
Paenibacillus sp. P22	483908	PRJEB4273	210864	Terrabacteria group	Firmicutes	5.44326	58.3	-	CBRA02	297	5300	4707	8/31/13	4/16/17	Contig	University of Vienna	SAMEA2272356	GCA_000469945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/945/GCA_000469945.2_ASM46994v2	-	P22
Alcanivorax sp. UBA2694	1945979	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.46257	63.4	-	DELO01	103	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451357	GCA_002354455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/455/GCA_002354455.1_ASM235445v1	28894102	-
Eubacterium sp. UBA2086	1946472	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.19835	48.3	-	DCZK01	259	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457479	GCA_002331885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/885/GCA_002331885.1_ASM233188v1	28894102	-
Acidovorax sp. SCN 65-28	1660086	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	4.31813	65.2	-	MEDM01	231	4006	3771	9/13/16	9/13/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03652432	GCA_001724795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/795/GCA_001724795.1_ASM172479v1	26031303	-
Marinobacter sp. UBA2688	1946816	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.25654	57.1	-	DELU01	32	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06453891	GCA_002352785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/785/GCA_002352785.1_ASM235278v1	28894102	-
Nocardioides sp. REDSEA-S31_B4	1811553	PRJNA289734	289734	Terrabacteria group	Actinobacteria	3.44106	71.6	-	LUPJ01	387	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534611	GCA_001627175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/175/GCA_001627175.1_ASM162717v1	27377622	-
Methylobacterium sp. Leaf104	1736254	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.968	70	-	LMMZ01	41	4617	4454	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151634	GCA_001422885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/885/GCA_001422885.1_Leaf104	26633631	Leaf104
Enterococcus sp. HMSC072D11	1715127	PRJNA296255	296255	Terrabacteria group	Firmicutes	2.88787	37.7	-	LTOR01	284	2968	2797	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498625	GCA_001837695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/695/GCA_001837695.1_ASM183769v1	-	HMSC072D11
Prevotella sp. P5-50	2024217	PRJNA396820	396820	FCB group	Bacteroidetes/Chlorobi group	2.98	45.9	-	NPJA01	55	2429	2306	8/14/17	8/16/17	Contig	University of Ljubljana	SAMN07431227	GCA_002251295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/295/GCA_002251295.1_ASM225129v1	-	P5-50
Mycobacterium sp. MAC_080597_8934	1335322	PRJNA203577	203577	Terrabacteria group	Actinobacteria	5.57145	68.9	-	JAOS01	60	5251	4771	1/27/14	4/9/17	Contig	Institute for Genome Sciences	SAMN02641625	GCA_000523975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/975/GCA_000523975.1_ASM52397v1	-	MAC_080597_8934
Streptococcus sp. HMSC076D11	1715202	PRJNA296331	296331	Terrabacteria group	Firmicutes	2.03679	35.3	-	LTKW01	92	2087	1987	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477557	GCA_001808815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/815/GCA_001808815.1_ASM180881v1	-	HMSC076D11
Bradyrhizobium sp. OHSU_III	1297865	PRJNA191811	191811	Proteobacteria	Alphaproteobacteria	7.93554	64.7	-	APJD01	82	7417	7217	11/20/13	4/9/17	Contig	FDA	SAMN02952940	GCA_000497675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/675/GCA_000497675.1_OHSU_W	24155888	OHSU_III
Arthrobacter sp. Soil761	1736400	PRJNA298127	298127	Terrabacteria group	Actinobacteria	5.00774	65.6	-	LMSF01	33	4623	4451	11/2/15	4/11/17	Scaffold	ETH Zurich	SAMN04155665	GCA_001428325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/325/GCA_001428325.1_Soil761	26633631	Soil761
Corynebacterium sp. HMSC06D04	1581123	PRJNA269892	269892	Terrabacteria group	Actinobacteria	2.67258	59	-	LWOE01	43	2520	2379	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03433350	GCA_001807315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/315/GCA_001807315.1_ASM180731v1	-	HMSC06D04
Staphylococcus sp. HMSC074A11	1715201	PRJNA296330	296330	Terrabacteria group	Firmicutes	2.44635	32.7	-	LTIC01	125	2404	2289	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477556	GCA_001810265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/265/GCA_001810265.1_ASM181026v1	-	HMSC074A11
Enterobacter sp. MGH 1	1329810	PRJNA201916	201916	Proteobacteria	Gammaproteobacteria	4.95328	55.4	-	JCLW01	9	4883	4627	2/3/14	4/9/17	Scaffold	Broad Institute	SAMN02138541	GCA_000534795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/795/GCA_000534795.1_Ente_cloa_complex_MGH_1_V2	-	MGH 1
Rhodococcus sp. Leaf278	1736319	PRJNA297956	297956	Terrabacteria group	Actinobacteria	5.7218	64.1	-	LMRR01	45	5386	5215	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151709	GCA_001426085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/085/GCA_001426085.1_Leaf278	26633631	Leaf278
Synechococcus sp. NKBG15041c	1407650	PRJDB1488	223632	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.18004	49.3	-	BAUB01	44	3020	2850	10/22/13	4/9/17	Contig	Tokyo university of agriculture and technology	SAMD00036772	GCA_000485815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/815/GCA_000485815.1_ASM48581v1	24285664	NKBG15041c
Sphingomonas sp. ATCC 31555	194867	PRJNA170137	170137	Proteobacteria	Alphaproteobacteria	4.04612	65.9	-	ALBQ01	62	3761	3640	7/30/12	4/17/17	Contig	"State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University"	SAMN02470959	GCA_000282895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/895/GCA_000282895.1_ASM28289v1	23045500	ATCC 31555
Clostridium sp. MSTE9	1105031	PRJNA78561	78561	Terrabacteria group	Firmicutes	3.50892	52	-	AKFU01	55	3372	3252	7/10/12	4/7/17	Contig	J. Craig Venter Institute	SAMN00828787	GCA_000277625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/625/GCA_000277625.1_CspMSTE9v1.0	-	MSTE9
Bacillus sp. UNC437CL72CviS29	1340430	PRJNA205959	205959	Terrabacteria group	Firmicutes	4.95921	35.6	-	AXVB01	46	5156	4743	10/25/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440768	GCA_000482345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/345/GCA_000482345.1_ASM48234v1	-	UNC437CL72CviS29
Flavobacterium sp. TH021	2022802	PRJNA395959	395959	FCB group	Bacteroidetes/Chlorobi group	3.23829	41.7	-	NOXV01	306	3077	2949	8/14/17	8/16/17	Scaffold	Nanjing Institute of Geography and Limnology	SAMN07418557	GCA_002251835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/835/GCA_002251835.1_ASM225183v1	-	TH021
Klebsiella sp. NFIX34	1566162	PRJEB16669	349895	Proteobacteria	Gammaproteobacteria	5.28302	58.1	-	FNRN01	19	5212	4971	10/22/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159401	GCA_900107805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/805/GCA_900107805.1_IMG-taxon_2603880178_annotated_assembly	-	NFIX34
Acinetobacter sp. CIP 102136	1144665	PRJNA183231	183231	Proteobacteria	Gammaproteobacteria	3.60661	42.5	-	APRV01	20	3462	3221	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01828133	GCA_000369685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/685/GCA_000369685.1_Acin_sp_CIP_102136_V1	-	CIP 102136
Paeniclostridium sordellii	1505	PRJEB8156	277680	Terrabacteria group	Firmicutes	3.51008	27.3	-	CDNS01	27	3425	3320	3/13/15	4/10/17	Contig	WTSI	SAMEA1572071	GCA_001372995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/995/GCA_001372995.1_UMC4401	-	UMC4401
Streptomyces sp. ACT-1	1609288	PRJNA38279	38279	Terrabacteria group	Actinobacteria	8.73168	72.1	-	ADFC02	2	7476	7175	12/30/09	5/19/17	Scaffold	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713595	GCA_000177175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/175/GCA_000177175.2_ASM17717v2	21460079	XylebKG-1
Pseudomonas sp. R81	1144885	PRJNA82849	82849	Proteobacteria	Gammaproteobacteria	6.22577	60.3	-	AHZN01	8	5779	5514	4/4/12	5/19/17	Scaffold	Botanical Institute	SAMN02471582	GCA_000257625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/625/GCA_000257625.1_ASM25762v1	22628504	R81
Elizabethkingia anophelis	1117645	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	4.1958	35.6	-	MAHR01	49	3892	3785	3/8/17	3/10/17	Contig	CDC	SAMN05277596	GCA_002023705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/705/GCA_002023705.1_ASM202370v1	-	CSID_3015183686
Salinispora pacifica CNT854	1137265	PRJNA169785	169785	Terrabacteria group	Actinobacteria	5.31542	69.7	-	AZWR01	104	5049	4608	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597248	GCA_000514835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/835/GCA_000514835.1_ASM51483v1	-	CNT854
Mycobacterium chelonae	1774	PRJNA323571	323571	Terrabacteria group	Actinobacteria	5.16665	64	-	MAET01	47	5111	4944	3/3/17	3/6/17	Contig	LNCC	SAMN05186772	GCA_002013635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/635/GCA_002013635.1_ASM201363v1	-	96-1724
Streptococcus sobrinus TCI-392	1074088	PRJNA71941	71941	Terrabacteria group	Firmicutes	2.03629	43.5	-	AGHJ01	435	2106	1777	10/6/11	3/30/17	Contig	JCVI	SAMN02436541	GCA_000228465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/465/GCA_000228465.2_SMUT2-NEX_57-392	-	TCI-392
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.62812	66.6	-	LOUT01	134	8004	7571	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449182	GCA_001523085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/085/GCA_001523085.1_ASM152308v1	-	INT25-BP2
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.84835	64.2	-	FVFY01	11	4787	4658	3/10/17	3/18/17	Contig	SC	SAMEA2068958	GCA_900132765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/765/GCA_900132765.1_10250_1_26	-	366
Aeromonas veronii	654	PRJEB18858	360736	Proteobacteria	Gammaproteobacteria	4.53442	58.7	-	FTMU01	93	4203	3976	1/14/17	4/6/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05892873	GCA_900156085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/085/GCA_900156085.1_IMG-taxon_2708742417_annotated_assembly	-	RU31B
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.23998	55	-	JZYV01	60	5167	4936	3/19/15	4/6/17	Contig	JCVI	SAMN03283688	GCA_000958075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/075/GCA_000958075.1_ASM95807v1	-	35715
Xanthomonas perforans	442694	PRJNA264141	264141	Proteobacteria	Gammaproteobacteria	5.51339	64.7	-	JRWW01	433	-	-	12/10/14	12/10/14	Scaffold	Universita di Udine	SAMN03114863	GCA_000800665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/665/GCA_000800665.1_ASM80066v1	-	4P1S2
Streptococcus pseudopneumoniae G42	1415758	PRJNA225866	225866	Terrabacteria group	Firmicutes	2.13523	39.9	-	AYRN01	199	2274	1522	12/11/13	12/15/15	Contig	"Research Institute of Physical-Chemical Medicine, Moscow, Russia"	SAMN02470841	GCA_000506665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/665/GCA_000506665.1_Spspn.strG42_v1.0	26563895	G42
Kingella kingae KK93	1348238	PRJEB4186	209171	Proteobacteria	Betaproteobacteria	1.99307	46.6	-	CBRQ01	1	1875	1619	8/28/13	4/2/17	Scaffold	URMITE	SAMEA2272080	GCA_000477275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/275/GCA_000477275.1_G120	-	KK93
Vibrio anguillarum	55601	PRJNA283571	283571	Proteobacteria	Gammaproteobacteria	4.24885	44.602	chromosome I:CP011436.1; chromosome II:CP011437.1; plasmid pJM1:CP016266.1	-	3	3706	3542	2/13/17	2/13/17	Chromosome	University of Copenhagen	SAMN03652801	GCA_001998845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/845/GCA_001998845.1_ASM199884v1	-	VIB 18
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.89569	55.4	-	LAAY01	40	4762	4554	3/19/15	3/25/17	Contig	JCVI	SAMN03283313	GCA_000956655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/655/GCA_000956655.1_ASM95665v1	-	28940
Citrobacter freundii RLS1	1454056	PRJNA226604	226604	Proteobacteria	Gammaproteobacteria	4.90789	51.7	-	JATT01	68	4831	4601	2/26/14	4/2/17	Contig	Rutgers University	SAMN02951916	GCA_000582615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/615/GCA_000582615.1_Citrobacter_assembly	-	RLS1
Leptospira santarosai serovar Arenal str. 7	1085550	PRJNA74215	74215	Spirochaetes	Spirochaetia	4.17964	41.6	-	AHQK01	536	4266	3835	2/3/12	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00739379	GCA_000246375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/375/GCA_000246375.2_CLC_glsol066	-	7
Acinetobacter pittii	48296	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.83914	38.8	-	LLHW01	405	3787	3551	10/27/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145741	GCA_001415865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/865/GCA_001415865.1_ASM141586v1	-	ABBL126
Xanthomonas euvesicatoria	456327	PRJNA275492	275492	Proteobacteria	Gammaproteobacteria	5.32536	64.5	-	JZLT01	125	4802	4385	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03349326	GCA_001009055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/055/GCA_001009055.1_v1	26089818	455
Pseudomonas amygdali pv. eriobotryae	129137	PRJNA287460	287460	Proteobacteria	Gammaproteobacteria	6.32156	57.8	-	LIID01	128	6066	5519	1/25/16	4/4/17	Contig	University of Edinburgh	SAMN03992199	GCA_001538055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/055/GCA_001538055.1_ASM153805v1	27145446	CFBP 2343
Brucella sp. CMUL 031	1927134	PRJNA357021	357021	Proteobacteria	Alphaproteobacteria	3.29216	57.2	-	MRUP01	35	3371	3141	5/19/17	5/24/17	Contig	LAU	SAMN06131434	GCA_002150355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/355/GCA_002150355.1_ASM215035v1	-	CMUL 031
Enterobacter asburiae	61645	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.02115	55.7	-	LVUG01	119	5060	4711	4/25/16	4/5/17	Contig	JCVI	SAMN04572683	GCA_001631385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/385/GCA_001631385.1_ASM163138v1	-	GN05598
Listeria monocytogenes	1639	PRJNA212117	212117	Terrabacteria group	Firmicutes	2.89733	38	chromosome:NZ_CP020832.1/CP020832.1	-	1	2957	2840	4/24/17	4/26/17	Complete Genome	"Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention"	SAMN02347435	GCA_002105695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/695/GCA_002105695.1_ASM210569v1	-	PNUSAL000096
Pseudoalteromonas sp. P1-13-1a	1723756	PRJNA294442	294442	Proteobacteria	Gammaproteobacteria	4.44267	40.7	-	LKDV01	174	3986	3861	10/21/15	4/11/17	Contig	Hans Knoell Institute	SAMN04026659	GCA_001401875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/875/GCA_001401875.1_ASM140187v1	26679587	P1-13-1a
Listeria monocytogenes	1639	PRJNA381593	381593	Terrabacteria group	Firmicutes	2.89247	38	chromosome:NZ_CP020774.1/CP020774.1	-	1	2912	2782	4/20/17	4/22/17	Complete Genome	University of Zuerich	SAMN06681248	GCA_002101275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/275/GCA_002101275.1_ASM210127v1	-	H34
Streptococcus oralis	1303	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.99335	41.2	-	JVNJ01	23	1979	1866	7/10/15	4/3/17	Contig	University of Washington	SAMN03197467	GCA_001072035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/035/GCA_001072035.1_ASM107203v1	26230489	274_SPSE
Acinetobacter nosocomialis	106654	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.96441	38.7	-	LYKD01	155	3748	3585	11/2/16	4/5/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745421	GCA_001864245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/245/GCA_001864245.1_ASM186424v1	-	XH654
Rhodococcus hoagii	43767	PRJNA301801	301801	Terrabacteria group	Actinobacteria	6.34088	62.4	-	LNIU01	30	5902	5762	7/19/16	7/19/16	Scaffold	Zhejiang Univesity	SAMN04260011	GCA_001687425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/425/GCA_001687425.1_ASM168742v1	-	MET
Staphylococcus capitis	29388	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.55465	32.9	-	JUYU01	40	2467	2360	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197846	GCA_001073715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/715/GCA_001073715.1_ASM107371v1	26230489	645_SEPI
Staphylococcus hominis	1290	PRJEB10524	374818	Terrabacteria group	Firmicutes	2.44804	31.5	-	FBVN01	663	2292	2170	2/12/17	2/23/17	Scaffold	UNIVERSITY OF LIVERPOOL	SAMEA3515759	GCA_900006665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/006/665/GCA_900006665.1_S.hominis_J31	-	-
Lactobacillus paracasei subsp. paracasei Lpp43	1256212	PRJNA178440	178440	Terrabacteria group	Firmicutes	3.11628	46.1	-	ANKI01	205	3306	2970	6/11/13	4/1/17	Contig	Danone Research	SAMN02469725	GCA_000410455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/455/GCA_000410455.1_ASM41045v1	23894338	Lpp43
Gardnerella vaginalis 0288E	698952	PRJNA42437	42437	Terrabacteria group	Actinobacteria	1.70877	41.2	-	ADEN01	17	1470	1347	5/21/12	3/30/17	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393775	GCA_000263555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/555/GCA_000263555.1_ASM26355v1	-	0288E
Aggregatibacter actinomycetemcomitans serotype b str. S23A	1167008	PRJNA91103	91103	Proteobacteria	Gammaproteobacteria	2.17043	44.4	-	AJMH02	44	2142	1964	1/24/13	4/4/17	Scaffold	"Bumgarner laboratory, Department of Microbiology, University of Washington"	SAMN02471978	GCA_000332955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/955/GCA_000332955.2_AaS23Av2.0	23194436	S23A
Lactobacillus crispatus	47770	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.0212	37	-	LYRD01	110	2046	1843	7/14/17	7/17/17	Scaffold	University of Minnesota	SAMN04498985	GCA_002218845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/845/GCA_002218845.1_ASM221884v1	-	UMNLC13
Pectobacterium carotovorum subsp. carotovorum	555	PRJNA269238	269238	Proteobacteria	Gammaproteobacteria	4.68376	52.2	-	JUJT01	34	4297	4121	12/29/14	4/2/17	Scaffold	Beijing Academy of Agriculture and Forestry Sciences	SAMN03252622	GCA_000808355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/355/GCA_000808355.1_ASM80835v1	-	BC D6
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.75639	47.6	-	MDZY01	78	3484	3302	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320400	GCA_001883255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/255/GCA_001883255.1_ASM188325v1	-	96/5134-k
Flavobacterium psychrophilum	96345	PRJEB21067	396411	FCB group	Bacteroidetes/Chlorobi group	2.75246	32.3	-	FYCH01	66	2507	2420	7/29/17	8/7/17	Contig	INRA	SAMEA104125175	GCA_900186435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/435/GCA_900186435.1_FPCH18951_V1	-	CH1895
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.35446	67.3	-	LOXH01	128	6671	6279	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449262	GCA_001524365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/365/GCA_001524365.1_ASM152436v1	-	MSMB112
Aeromonas hydrophila	644	PRJNA302455	302455	Proteobacteria	Gammaproteobacteria	4.96991	60.9	-	LRRW01	13	4600	4415	3/31/16	4/5/17	Contig	Mississippi State University	SAMN04273360	GCA_001604855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/855/GCA_001604855.1_ASM160485v1	-	AL10-121
Pseudomonas stutzeri	316	PRJNA360478	360478	Proteobacteria	Gammaproteobacteria	4.61173	63.8	-	MUEH01	51	4312	4157	8/31/17	9/2/17	Scaffold	"ICAR-Indian Agricultural Research Institute, New Delhi"	SAMN06211260	GCA_002282995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/995/GCA_002282995.1_ASM228299v1	-	KMS 55
Vibrio sp. VPAP30	1647102	PRJNA282014	282014	Proteobacteria	Gammaproteobacteria	5.16791	44.5	-	LBLS01	43	4733	4546	6/5/15	4/10/17	Contig	Universidad Mayor	SAMN03565815	GCA_001188205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/205/GCA_001188205.1_ASM118820v1	26159530	VPAP30
Staphylococcus saprophyticus	29385	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.60879	32.9	-	LMZL01	29	2571	2404	9/28/16	4/5/17	Scaffold	Tufts University	SAMN04244244	GCA_001747575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/575/GCA_001747575.1_ASM174757v1	-	1146
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.22007	36.7	-	LPSE01	6	2340	2227	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305165	GCA_001560515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/515/GCA_001560515.1_NG05B_C06_11	-	NG05B_C06_11
Bifidobacterium breve	1685	PRJDB4597	325619	Terrabacteria group	Actinobacteria	2.47084	59.2	-	BCXV01	39	2206	1990	6/10/16	4/5/17	Contig	Yakult Central Institute	SAMD00047606	GCA_001685905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/905/GCA_001685905.1_ASM168590v1	27340092	BR-H29
Mycobacterium abscessus M115	1162287	PRJNA89601	89601	Terrabacteria group	Actinobacteria	4.97594	64.1	-	AJLZ01	47	5004	4842	4/30/12	5/19/17	Contig	"Universiti Malaya, Kuala Lumpur"	SAMN02471412	GCA_000260595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/595/GCA_000260595.1_ASM26059v1	22887681	M115
Moraxella catarrhalis	480	PRJNA297370	297370	Proteobacteria	Gammaproteobacteria	1.88491	41.6	-	LXHO01	22	1751	1625	6/3/16	4/5/17	Contig	Drexel University College of Medicine	SAMN04122796	GCA_001656475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/475/GCA_001656475.1_ASM165647v1	26912404	N1
Lactobacillus salivarius	1624	PRJNA321782	321782	Terrabacteria group	Firmicutes	2.13784	32.9	-	LXYZ01	162	2130	1965	9/12/17	9/14/17	Contig	Seoul National University	SAMN05003811	GCA_002289905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/905/GCA_002289905.1_ASM228990v1	-	KLW008
Klebsiella oxytoca	571	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.96464	55	-	JVBF01	245	5750	5475	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197783	GCA_001057405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/405/GCA_001057405.1_ASM105740v1	26230489	582_KOXY
Cronobacter sakazakii ES35	1159614	PRJNA89113	89113	Proteobacteria	Gammaproteobacteria	4.34771	57	-	AJLC01	183	4251	3808	6/7/13	4/1/17	Contig	Cronobacter sakazakii Genome Sequencing Consortium	SAMN02952936	GCA_000409405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/405/GCA_000409405.1_Csak35_final_contigs	23724777	ES35
Enterobacter cloacae IIT-BT 08	1070842	PRJNA82637	82637	Proteobacteria	Gammaproteobacteria	4.67204	56	-	AZXO01	1	4506	4316	1/3/14	4/10/17	Scaffold	JGI	SAMN02597271	GCA_000515295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/295/GCA_000515295.1_ASM51529v1	-	IIT-BT 08
Proteus mirabilis	584	PRJNA254158	254158	Proteobacteria	Gammaproteobacteria	3.95371	38.4	-	LTBK01	113	3695	3206	5/13/16	4/11/17	Contig	Texas A&M University	SAMN02900469	GCA_001643755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/755/GCA_001643755.1_ASM164375v1	-	Wood
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.45427	32.4	-	CUFO01	42	2435	2246	3/31/15	3/26/17	Contig	SC	SAMEA1035059	GCA_001228845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/845/GCA_001228845.1_7068_7_21	-	W59
Propionibacterium acnes HL005PA3	765098	PRJNA49229	49229	Terrabacteria group	Actinobacteria	2.47483	60.1	-	ADZM01	17	2495	2367	7/29/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189196	GCA_000144345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/345/GCA_000144345.1_ASM14434v1	-	HL005PA3
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.05295	67	-	LPCN01	108	6494	6184	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449405	GCA_001529585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/585/GCA_001529585.1_ASM152958v1	-	AU21726
Burkholderia sp. lig30	1192124	PRJNA241332	241332	Proteobacteria	Betaproteobacteria	5.50818	66.5	-	JGVW01	139	5085	4805	5/9/14	4/16/17	Contig	Oak Ridge National Lab	SAMN02689377	GCA_000687455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/455/GCA_000687455.2_Burkholderia.strain_LIG30_v1.0	24948777	lig30
Campylobacter coli 2688	887319	PRJNA52775	52775	Proteobacteria	delta/epsilon subdivisions	1.74409	31.3	-	AIMP01	209	1857	1743	3/16/12	3/15/17	Contig	Cornell University	SAMN02429017	GCA_000253555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/555/GCA_000253555.2_ASM25355v2	-	2688
Lactobacillus brevis	1580	PRJNA288595	288595	Terrabacteria group	Firmicutes	2.61414	45.5	-	LGIX01	133	2750	2415	12/28/16	4/6/17	Scaffold	University of Saskatchewan	SAMN03813855	GCA_001923045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/923/045/GCA_001923045.1_ASM192304v1	-	BSO 310
Mannheimia haemolytica	75985	PRJNA349069	349069	Proteobacteria	Gammaproteobacteria	2.67637	41.1	-	MLYL01	60	2763	2605	10/28/16	4/5/17	Scaffold	Oklahoma State Universtiy	SAMN05919894	GCA_001856545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/545/GCA_001856545.1_ASM185654v1	-	16041065 BH
Listeria monocytogenes	1639	PRJNA319288	319288	Terrabacteria group	Firmicutes	2.98269	38	chromosome:NZ_CP015593.1/CP015593.1	-	1	3037	2919	3/20/17	3/22/17	Complete Genome	National Institute for Communicable Disease Control and Prevention 	SAMN04884549	GCA_002043045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/045/GCA_002043045.1_ASM204304v1	-	ICDC-LM188
Serratia marcescens BIDMC 44	1400186	PRJNA219251	219251	Proteobacteria	Gammaproteobacteria	5.34166	59.6	-	JAPD01	2	5008	4823	1/23/14	4/10/17	Scaffold	Broad Institute	SAMN02356583	GCA_000521925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/925/GCA_000521925.1_Serr_marc_BIDMC_44_V1	-	BIDMC 44
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.17536	39.9	-	FQLN01	15	1070	968	5/10/17	5/24/17	Scaffold	WTSI	SAMEA1094365	GCA_900118785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/785/GCA_900118785.1_7067_6_73	-	09_02
Leuconostoc mesenteroides subsp. cremoris	33965	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.61323	38	-	MPEF01	124	1729	1399	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981478	GCA_002092515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/515/GCA_002092515.1_ASM209251v1	28217118	LMGCF16
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.16051	41.5	-	JJPK01	139	3557	3349	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708949	GCA_000979635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/635/GCA_000979635.1_gtlEnvA5udCFS	25756680	3.F.T.1A.4
Yersinia enterocolitica	630	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	4.44152	47	-	CPZE01	115	4159	3895	3/23/15	3/26/17	Contig	SC	SAMEA1486319	GCA_001090225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/225/GCA_001090225.1_8016_2_66	-	IP20851
Listeria monocytogenes	1639	PRJNA371291	371291	Terrabacteria group	Firmicutes	2.91395	38	chromosome:NZ_CP019616.1/CP019616.1	-	1	2958	2827	2/14/17	3/2/17	Complete Genome	Canadian Food Inspection Agency	SAMN06297510	GCA_001998985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/985/GCA_001998985.1_ASM199898v1	-	10-092876-1063 LM3
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.4612	53.6	-	MLBL02	45	2393	2201	10/13/16	8/3/17	Contig	Institute for Medical Research	SAMN05877648	GCA_001833005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/005/GCA_001833005.2_ASM183300v2	28254972	c488
Sinorhizobium meliloti 1A42	1194706	PRJNA167584	167584	Proteobacteria	Alphaproteobacteria	7.16272	62	-	ALAA01	315	7328	5968	8/13/12	5/19/17	Scaffold	University of Florence	SAMN02471746	GCA_000287435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/435/GCA_000287435.1_SM1A42_v1	23431003	1A42
Bordetella bronchiseptica D756	1458269	PRJNA237094	237094	Proteobacteria	Betaproteobacteria	5.23366	68.2	-	JGWT01	102	4995	4857	5/12/14	4/2/17	Contig	JCVI	SAMN02614576	GCA_000690095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/095/GCA_000690095.1_gbb77v01	25908122	D756
Listeria monocytogenes	1639	PRJNA371291	371291	Terrabacteria group	Firmicutes	2.99679	38	chromosome:NZ_CP019618.1/CP019618.1	-	1	3084	2962	2/14/17	3/3/17	Complete Genome	Canadian Food Inspection Agency	SAMN06297522	GCA_001999025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/025/GCA_001999025.1_ASM199902v1	-	10-092876-0731 LM5
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31169	57.2358	chromosome 1:NZ_CP018514.1/CP018514.1; chromosome 2:NZ_CP018515.1/CP018515.1	-	2	3369	3142	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932956	GCA_002191475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/475/GCA_002191475.1_ASM219147v1	28388689	BwIM_SYR_05
Lactobacillus rhamnosus L31	1390386	PRJNA217079	217079	Terrabacteria group	Firmicutes	2.82675	46.7	-	AYTQ01	67	2854	2675	11/17/14	4/2/17	Contig	Baylor College of Medicine	SAMN02324553	GCA_000784405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/405/GCA_000784405.1_L31	25197459	L31
Pasteurella multocida subsp. multocida	44283	PRJNA244093	244093	Proteobacteria	Gammaproteobacteria	2.34931	40.3	-	JQAB01	32	2235	2152	6/14/15	4/3/17	Contig	Murdoch University	SAMN02721586	GCA_001027735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/735/GCA_001027735.1_ASM102773v1	26151935	Islm
[Haemophilus] parasuis	738	PRJNA301181	301181	Proteobacteria	Gammaproteobacteria	2.45443	39.5	-	MNAX01	134	2368	2157	1/6/17	4/6/17	Scaffold	Chinese Academy of Agricultural Sciences	SAMN04230867	GCA_001938405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/405/GCA_001938405.1_ASM193840v1	-	H39
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12882	41.2	-	CWDO01	80	2059	1884	6/24/15	3/26/17	Contig	SC	SAMEA1032778	GCA_001175465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/465/GCA_001175465.1_6903_7_29	-	EQUI0174
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.85462	66.3	-	JWFT01	488	4532	4301	7/10/15	3/26/17	Contig	University of Washington	SAMN03196989	GCA_001069105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/105/GCA_001069105.1_ASM106910v1	26230489	1025_SMAL
Bacillus amyloliquefaciens	1390	PRJEB9876	290051	Terrabacteria group	Firmicutes	4.03148	46.3	-	CYHL01	128	3950	3794	8/27/15	4/4/17	Contig	University of Liverpool	SAMEA3484404	GCA_001286945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/945/GCA_001286945.1_Bacillus_JRS5	-	-
Chlamydia psittaci C6/98	1112249	PRJNA77071	77071	PVC group	Chlamydiae	1.24794	39.4	-	ATNA01	142	1079	990	7/2/13	4/1/17	Scaffold	University of Maryland School of Medicine	SAMN00860250	GCA_000417675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/675/GCA_000417675.1_ASM41767v1	-	C6/98
Enterococcus faecium TX0133A	749521	PRJNA47195	47195	Terrabacteria group	Firmicutes	2.93032	37.7	-	AECH01	201	3050	2892	9/8/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189134	GCA_000148285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/285/GCA_000148285.1_ASM14828v1	-	TX0133A
Neisseria gonorrhoeae	485	PRJNA236643	236643	Proteobacteria	Betaproteobacteria	2.1638	52	-	JFBB01	232	2492	1972	5/22/14	3/24/17	Contig	Federal Medical and Biological Agency SRI of Physical-Chemical Medicine	SAMN02644627	GCA_000695445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/445/GCA_000695445.1_NG-m07.05	-	m07.05
Streptococcus mutans TCI-191	1074149	PRJNA72041	72041	Terrabacteria group	Firmicutes	1.83201	37	-	AGLG01	120	1861	1753	10/6/11	3/22/17	Contig	JCVI	SAMN02436352	GCA_000229305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/305/GCA_000229305.2_SMUT5-NEX_62-191	-	TCI-191
Borrelia garinii IPT113	1408842	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.05599	28.3	-	AYAR01	511	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378809	GCA_000501755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/755/GCA_000501755.1_BorGarIPT113	-	IPT113
Enterococcus faecalis TX0855	749511	PRJNA47177	47177	Terrabacteria group	Firmicutes	2.98732	37.2	-	AEBV01	65	3039	2893	9/9/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189119	GCA_000148045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/045/GCA_000148045.1_ASM14804v1	-	TX0855
Brucella suis 1330	204722	PRJNA243899	243899	Proteobacteria	Alphaproteobacteria	3.296	57.3	-	JMUC01	2	3339	3137	8/19/14	4/2/17	Scaffold	Los Alamos National Laboratory	SAMN02777545	GCA_000742005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/005/GCA_000742005.1_ASM74200v1	25237024	1330
Rhizobium leguminosarum	384	PRJNA316801	316801	Proteobacteria	Alphaproteobacteria	7.66568	60.7	-	LVYU01	166	7543	7114	4/6/16	4/5/17	Contig	All-Russia Research Institute for Agricultural Microbiology	SAMN04590176	GCA_001612535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/535/GCA_001612535.1_ASM161253v1	-	Vaf12
Treponema pallidum subsp. pallidum	161	PRJNA322283	322283	Spirochaetes	Spirochaetia	1.13915	52.8	chromosome:NZ_CP016061.1/CP016061.1	-	1	1068	1006	8/25/16	4/5/17	Chromosome	"National Institute of Health, Portugal"	SAMN05150628	GCA_001713175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/175/GCA_001713175.1_ASM171317v1	-	PT_SIF1196
Borrelia burgdorferi IPT46	1408865	PRJNA223339	223339	Spirochaetes	Spirochaetia	0.94062	28.9	-	AYBO01	661	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378832	GCA_000501395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/395/GCA_000501395.1_BorBurgIPT46	-	IPT46
Burkholderia multivorans	87883	PRJEB12784	382507	Proteobacteria	Betaproteobacteria	6.29674	67.2	-	FKJS01	4	5968	5710	4/11/17	7/9/17	Contig	LM-UGent	SAMEA3876905	GCA_900079595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/595/GCA_900079595.1_ASM90007959v1	-	-
Clostridium botulinum	1491	PRJNA290143	290143	Terrabacteria group	Firmicutes	3.04615	27.9	-	LGVP01	112	2939	2799	8/11/15	3/26/17	Scaffold	Anses	SAMN03876595	GCA_001264575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/575/GCA_001264575.1_ASM126457v1	26430029	29401-CD
Listeria monocytogenes	1639	PRJNA371291	371291	Terrabacteria group	Firmicutes	2.97445	38	chromosome:NZ_CP019619.1/CP019619.1	-	1	3022	2905	2/14/17	3/3/17	Complete Genome	Canadian Food Inspection Agency	SAMN06297524	GCA_001999045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/045/GCA_001999045.1_ASM199904v1	-	10-092876-1155 LM6
Salinispora arenicola CNH941	1137252	PRJNA169780	169780	Terrabacteria group	Actinobacteria	5.7615	69.4	-	AZWV01	73	5291	4918	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597252	GCA_000514915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/915/GCA_000514915.1_ASM51491v1	-	CNH941
Lactobacillus casei	1582	PRJNA351770	351770	Terrabacteria group	Firmicutes	2.88565	46.1	-	MOAG01	236	2947	2778	5/9/17	5/22/17	Contig	Tianjin University of Science & Technology	SAMN05954276	GCA_002120125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/125/GCA_002120125.1_ASM212012v1	-	HZ-1
Coxiella burnetii	777	PRJNA394747	394747	Proteobacteria	Gammaproteobacteria	1.97402	42.5	-	NOLP01	40	2154	1813	8/11/17	8/15/17	Contig	National Institutes of Health	SAMN07349493	GCA_002247225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/225/GCA_002247225.1_ASM224722v1	-	Ko Q229
Listeria monocytogenes	1639	PRJNA371291	371291	Terrabacteria group	Firmicutes	2.92201	38	chromosome:NZ_CP019620.1/CP019620.1	-	1	2971	2837	2/14/17	3/2/17	Complete Genome	Canadian Food Inspection Agency	SAMN06297525	GCA_001999065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/065/GCA_001999065.1_ASM199906v1	-	10-092876-1547 LM7
Vibrio parahaemolyticus VP2007-007	1238192	PRJNA176626	176626	Proteobacteria	Gammaproteobacteria	5.12245	45.1	-	JALI01	86	5260	4485	2/5/14	3/18/17	Scaffold	IGS	SAMN01923803	GCA_000558925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/925/GCA_000558925.2_vpVP2007007	-	VP2007-007
Aeromonas salmonicida	645	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.71498	58.8	-	NVQH01	58	4345	4171	9/20/17	9/22/17	Contig	JCVI	SAMN07450651	GCA_002317045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/045/GCA_002317045.1_ASM231704v1	-	ECFood+05
Streptococcus mitis	28037	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.00089	40	-	JVYJ01	83	1994	1876	7/10/15	4/3/17	Contig	University of Washington	SAMN03197181	GCA_001070375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/375/GCA_001070375.1_ASM107037v1	26230489	1217_SPSE
Oenococcus oeni S28	1428445	PRJNA229736	229736	Terrabacteria group	Firmicutes	1.8434	37.9	-	AZJY01	46	1885	1642	10/1/14	4/11/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02902402	GCA_000761845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/845/GCA_000761845.1_Oeoe_S28_1.0	24901216	S28
Xanthomonas oryzae pv. oryzae	64187	PRJNA269391	269391	Proteobacteria	Gammaproteobacteria	4.23908	63.9	-	JXDN01	419	4218	3408	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252490	GCA_001927325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/325/GCA_001927325.1_ASM192732v1	-	BXO2
Campylobacter fetus subsp. testudinum	1507806	PRJNA285177	285177	Proteobacteria	delta/epsilon subdivisions	1.75296	33.1	-	LMBG01	160	1782	1661	8/5/16	4/5/17	Contig	Utrecht University	SAMN03741933	GCA_001699485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/485/GCA_001699485.1_ASM169948v1	27333878	D6856
Listeria monocytogenes	1639	PRJNA371291	371291	Terrabacteria group	Firmicutes	3.07003	38	chromosome:NZ_CP019622.1/CP019622.1	-	1	3157	3018	2/14/17	3/2/17	Complete Genome	Canadian Food Inspection Agency	SAMN06297602	GCA_001999105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/105/GCA_001999105.1_ASM199910v1	-	10-092876-0145 LM9
Leptospira borgpetersenii serovar Javanica str. L0864	1049765	PRJNA74247	74247	Spirochaetes	Spirochaetia	3.85519	40.1	-	AHRA01	178	3679	3413	2/3/12	3/30/17	Scaffold	J. Craig Venter Institute	SAMN00739396	GCA_000246695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/695/GCA_000246695.2_CLC_glsol175	-	L0864
Lactobacillus delbrueckii subsp. sunkii	1050107	PRJNA289290	289290	Terrabacteria group	Firmicutes	1.94526	50.1	-	LGHR01	32	1939	1723	7/31/15	4/3/17	Contig	"ChunLab, Inc"	SAMN03852102	GCA_001190005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/190/005/GCA_001190005.1_ASM119000v1	-	JCM 17838
Yersinia pseudotuberculosis	633	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.64148	47.4	-	CQBA01	83	4267	4002	3/23/15	4/3/17	Scaffold	SC	SAMEA859926	GCA_001136125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/125/GCA_001136125.1_5139_3_10	-	IP33177
Brucella abortus bv. 6 str. 870	520454	PRJNA33025	33025	Proteobacteria	Alphaproteobacteria	3.27034	57.2	-	ACBG01	13	3329	3104	1/23/09	3/22/17	Scaffold	Broad Institute	SAMN02595275	GCA_000157675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/675/GCA_000157675.1_ASM15767v1	-	870
Francisella tularensis subsp. holarctica	119857	PRJNA281242	281242	Proteobacteria	Gammaproteobacteria	1.89415	32.3	chromosome:NZ_CP011488.2/CP011488.2	-	1	1954	1540	7/1/15	5/29/17	Chromosome	"Alkek Center for Metagenomics and Microbiome Research, Baylor College of Medicine"	SAMN03486587	GCA_001044315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/315/GCA_001044315.2_ASM104431v2	26272574	OR96-0246
Streptococcus salivarius	1304	PRJNA320256	320256	Terrabacteria group	Firmicutes	2.25502	39.8	-	LXOU01	13	2121	1991	4/17/17	4/21/17	Contig	State University of Campinas	SAMN04942660	GCA_002094005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/005/GCA_002094005.1_ASM209400v1	27902365	85-06 S24
Shigella boydii	621	PRJNA288483	288483	Proteobacteria	Gammaproteobacteria	4.16022	51.2	-	LPTD01	896	4662	3917	12/15/16	2/26/17	Contig	"University of Maryland, School of Medicine"	SAMN04001703	GCA_001906285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/285/GCA_001906285.1_ASM190628v1	-	602988
Clostridioides difficile T17	1215076	PRJEB206	222730	Terrabacteria group	Firmicutes	3.98825	28.3	-	CAMT01	449	3719	3512	10/14/13	3/15/17	Scaffold	LPBA	SAMEA3138895	GCA_000530895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/895/GCA_000530895.1_T17	-	T17
Vibrio cholerae	666	PRJNA278342	278342	Proteobacteria	Gammaproteobacteria	3.95028	47.4986	plasmid p89004:NZ_CM003325.1/CM003325.1	LBBR01	59	3773	3616	5/7/15	3/26/17	Scaffold	Yunnan Provincial Centre for Disease Control and Prevention	SAMN03402963	GCA_001030035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/035/GCA_001030035.1_ASM103003v1	-	YN89004
Ralstonia solanacearum	305	PRJNA347357	347357	Proteobacteria	Betaproteobacteria	5.48625	67	-	MNCM01	139	4862	4618	10/26/16	4/5/17	Scaffold	University of Exeter	SAMN05879720	GCA_001854265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/265/GCA_001854265.1_ASM185426v1	-	RD15
Listeria monocytogenes	1639	PRJNA371291	371291	Terrabacteria group	Firmicutes	2.96566	38	chromosome:NZ_CP019624.1/CP019624.1	-	1	3030	2890	2/14/17	3/2/17	Complete Genome	Canadian Food Inspection Agency	SAMN06297604	GCA_001999145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/145/GCA_001999145.1_ASM199914v1	-	10-092876-1016 LM11
Burkholderia mallei	13373	PRJNA244035	244035	Proteobacteria	Betaproteobacteria	5.46871	68.4	-	JPGH01	3	5911	5301	9/4/15	4/4/17	Scaffold	Los Alamos National Laboratory	SAMN02798092	GCA_001279175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/175/GCA_001279175.1_BGE	26744368	Turkey6
Corynebacterium glutamicum	1718	PRJNA252976	252976	Terrabacteria group	Actinobacteria	3.04894	54.2	-	JOLA01	56	-	-	9/27/17	9/27/17	Scaffold	Nanjing Tech University	SAMN02865958	GCA_002379385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/385/GCA_002379385.1_ASM237938v1	25630515	1006
Bacillus pumilus	1408	PRJNA252901	252901	Terrabacteria group	Firmicutes	3.57274	41.9	-	JOJX02	8	3670	3475	6/27/14	4/3/17	Scaffold	Kazan Federal University	SAMN02864245	GCA_000714495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/495/GCA_000714495.2_ASM71449v2	25059870	19-Mar
Listeria monocytogenes	1639	PRJNA371291	371291	Terrabacteria group	Firmicutes	2.92963	38	chromosome:NZ_CP019625.1/CP019625.1	-	1	3000	2875	2/14/17	3/2/17	Complete Genome	Canadian Food Inspection Agency	SAMN06297605	GCA_001999165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/165/GCA_001999165.1_ASM199916v1	-	10-092876-0769 LM12
Listeria monocytogenes	1639	PRJNA355549	355549	Terrabacteria group	Firmicutes	3.00399	38	chromosome:NZ_CP019164.1/CP019164.1	-	1	3091	2968	1/17/17	3/2/17	Complete Genome	Food and Drug Administration	SAMN02867555	GCA_001952735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/735/GCA_001952735.1_ASM195273v1	-	HPB2088
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.09484	66.9	-	MUJP01	5	6685	6408	2/3/17	3/29/17	Contig	University of British Columbia	SAMN05001827	GCA_001984275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/275/GCA_001984275.1_ASM198427v1	-	VC7604
Lactobacillus reuteri	1598	PRJNA342243	342243	Terrabacteria group	Firmicutes	2.14018	38.7	-	MIMW01	136	2150	1993	5/11/17	5/22/17	Contig	Seoul National University	SAMN05751497	GCA_002128705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/705/GCA_002128705.1_ASM212870v1	-	KLR4001
Streptococcus thermophilus CNCM I-1630	1042404	PRJNA67867	67867	Terrabacteria group	Firmicutes	1.62185	39.1	-	AGFN01	376	1936	1891	10/28/11	12/6/13	Contig	Washington University School of Medicine Center for Genome Sciences and Systems Biology	SAMN02436864	GCA_000284675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/675/GCA_000284675.1_ASM28467v1	22030749	CNCM I-1630
Bacteroides fragilis str. 3986 T(B)9	1339287	PRJNA206118	206118	FCB group	Bacteroidetes/Chlorobi group	5.43075	43.3	-	JGCX01	211	4872	4466	3/20/14	4/2/17	Contig	IGS	SAMN02314535	GCA_000598465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/465/GCA_000598465.1_ASM59846v1	-	3986 T(B)9
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.87838	50.5	-	CXLR01	433	5508	4684	7/16/15	2/24/17	Contig	SC	SAMEA2003494	GCA_001251895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/895/GCA_001251895.1_8290_5_3	-	36991242
Listeria monocytogenes	1639	PRJNA355549	355549	Terrabacteria group	Firmicutes	3.00535	38	chromosome:NZ_CP019170.1/CP019170.1	-	1	3090	2970	1/17/17	3/2/17	Complete Genome	Food and Drug Administration	SAMN04277002	GCA_001952795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/795/GCA_001952795.1_ASM195279v1	-	CFSAN042079
Bacillus licheniformis	1402	PRJNA342590	342590	Terrabacteria group	Firmicutes	4.16708	46.2	-	MIPQ01	33	4318	4147	12/12/16	4/6/17	Contig	Agricultural Research Organisation - volcani center - Israel	SAMN05762524	GCA_001901555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/555/GCA_001901555.1_ASM190155v1	-	127185/10
Vibrio vulnificus	672	PRJNA276162	276162	Proteobacteria	Gammaproteobacteria	4.8843	46.8	-	JZEN01	105	4430	4302	3/23/15	4/3/17	Contig	Hankuk University of Foreign Studies	SAMN03371459	GCA_000959845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/845/GCA_000959845.1_ASM95984v1	-	SC9794
Pseudomonas syringae pv. lapsa	199201	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.85043	59.2	-	LJQQ01	118	5236	4995	10/20/15	3/27/17	Scaffold	University of Toronto	SAMN03976249	GCA_001400495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/495/GCA_001400495.1_PlpICMP3947	-	ICMP3947
Streptococcus suis 07SC3	1214149	PRJNA171409	171409	Terrabacteria group	Firmicutes	2.06109	41	-	ALKP01	33	2055	1971	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02470639	GCA_000440215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/215/GCA_000440215.1_version1	-	07SC3
Listeria monocytogenes	1639	PRJNA355549	355549	Terrabacteria group	Firmicutes	3.00535	38	chromosome:NZ_CP018685.1/CP018685.1	-	1	3090	2970	12/21/16	3/2/17	Complete Genome	Food and Drug Administration	SAMN03160826	GCA_001913195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/195/GCA_001913195.1_ASM191319v1	-	HPB913
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	3.03083	38	chromosome:NZ_CP016213.1/CP016213.1	-	1	3099	2973	12/19/16	3/2/17	Complete Genome	FDA/CFSAN	SAMN03386937	GCA_001908335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/335/GCA_001908335.1_ASM190833v1	-	CFSAN029793
Haemophilus influenzae	727	PRJNA328024	328024	Proteobacteria	Gammaproteobacteria	1.82922	38	chromosome:NZ_CP017811.1/CP017811.1	-	1	1823	1652	10/31/16	3/28/17	Complete Genome	Public Health Agency of Canada	SAMN05714732	GCA_001856725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/725/GCA_001856725.1_ASM185672v1	-	NML-Hia-1
Bifidobacterium longum subsp. infantis	1682	PRJEB7117	270920	Terrabacteria group	Actinobacteria	2.78904	59.8	-	CCWN01	57	2657	2408	12/19/14	4/2/17	Contig	CHUV-UNIL	SAMEA2747183	GCA_000825005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/005/GCA_000825005.1_BIC1206122787.V1	-	BIC1206122787
Fusobacterium nucleatum subsp. animalis ChDC F324	1307429	PRJNA193581	193581	Fusobacteria	Fusobacteriia	2.26572	26.9	-	ATKD01	123	2237	2098	8/29/13	4/2/17	Contig	Dental School of Chosun University	SAMN02469583	GCA_000455985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/985/GCA_000455985.1_de_novo	24336380	ChDC F324
Shigella flexneri S6162	1210044	PRJNA170569	170569	Proteobacteria	Gammaproteobacteria	4.669	50.6	-	ANAN01	869	5041	4225	1/6/15	8/8/17	Contig	University of Maryland School of Medicine	SAMN03276474	GCA_000815945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/945/GCA_000815945.1_ASM81594v1	-	S6162
Listeria monocytogenes	1639	PRJNA239039	239039	Terrabacteria group	Firmicutes	3.01839	38	chromosome:NZ_CP011345.1/CP011345.1	-	1	3115	2995	5/16/16	3/1/17	Complete Genome	University of Tasmania	SAMN03579634	GCA_001644625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/625/GCA_001644625.1_ASM164462v1	-	FW040025
Pseudomonas putida T2-2	1449987	PRJNA235245	235245	Proteobacteria	Gammaproteobacteria	5.52423	62.6	-	JALX01	389	5263	4960	6/23/14	4/2/17	Contig	University of Malaya	SAMN02869884	GCA_000710785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/785/GCA_000710785.1_De_novo_Assembly	-	T2-2
Xylella fastidiosa subsp. multiplex	644357	PRJNA314984	314984	Proteobacteria	Gammaproteobacteria	2.50498	51.8	-	LUYB01	256	2394	2153	1/25/17	4/6/17	Contig	INRA	SAMN04546482	GCA_001971505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/505/GCA_001971505.1_ASM197150v1	-	CFBP8417
Leptospira interrogans serovar Pyrogenes str. R168	1049929	PRJNA74097	74097	Spirochaetes	Spirochaetia	4.86835	35.2	-	AHNH02	99	4457	4008	1/24/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436589	GCA_000244095.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/095/GCA_000244095.3_gls454092v02	-	R168
Listeria monocytogenes	1639	PRJNA261392	261392	Terrabacteria group	Firmicutes	2.86429	38	chromosome:NZ_CP014261.1/CP014261.1	-	1	2908	2791	2/8/16	3/1/17	Complete Genome	IZSAM	SAMN04452088	GCA_001551855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/551/855/GCA_001551855.1_ASM155185v1	-	2015TE19005-1355
Listeria monocytogenes	1639	PRJNA261392	261392	Terrabacteria group	Firmicutes	2.90553	38	chromosome:NZ_CP013919.1/CP013919.1	-	1	2960	2855	1/12/16	3/1/17	Complete Genome	IZSAM	SAMN04387840	GCA_001513695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/695/GCA_001513695.1_ASM151369v1	-	IZSAM_Lm_15_17439_A144
Listeria monocytogenes	1639	PRJNA306210	306210	Terrabacteria group	Firmicutes	2.92775	38	chromosome:NZ_CP013722.1/CP013722.1	-	1	2979	2867	12/30/15	3/1/17	Complete Genome	"University of Zurich, Vetsuisse Faculty"	SAMN04348333	GCA_001483405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/483/405/GCA_001483405.1_ASM148340v1	26966206	Lm 3163
Streptococcus pneumoniae	1313	PRJNA304320	304320	Terrabacteria group	Firmicutes	2.06928	39.8	chromosome:NZ_CP016633.2/CP016633.2	-	1	2282	1980	8/29/16	4/6/17	Chromosome	University of Kaiserslautern	SAMN04320590	GCA_001715565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/565/GCA_001715565.2_ASM171556v2	-	D141
Listeria monocytogenes	1639	PRJNA306208	306208	Terrabacteria group	Firmicutes	2.90535	38	chromosome:NZ_CP013723.1/CP013723.1	-	1	2967	2845	12/30/15	3/1/17	Complete Genome	"University of Zurich, Vetsuisse Faculty"	SAMN04348332	GCA_001483425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/483/425/GCA_001483425.1_ASM148342v1	26966206	Lm 3136
Listeria monocytogenes	1639	PRJNA302838	302838	Terrabacteria group	Firmicutes	2.94251	38	chromosome:NZ_CP013285.1/CP013285.1	-	1	2977	2851	12/1/15	3/1/17	Complete Genome	ETH Zurich	SAMN04286628	GCA_001454845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/845/GCA_001454845.1_ASM145484v1	27034489	WSLC 1018
Haemophilus influenzae	727	PRJNA272685	272685	Proteobacteria	Gammaproteobacteria	1.81113	37.9	-	JXLY01	22	1810	1661	2/9/15	3/25/17	Contig	Novartis Vaccines	SAMN03284972	GCA_000833875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/875/GCA_000833875.1_ASM83387v1	25814593	Hi345
Prochlorococcus marinus str. MIT 1323	1801625	PRJNA311923	311923	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.44068	50.6	-	LVHQ01	26	2435	2311	4/25/16	4/5/17	Contig	MIT	SAMN04490363	GCA_001632025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/025/GCA_001632025.1_ASM163202v1	-	MIT 1323
Mycobacterium bovis	1765	PRJNA214551	214551	Terrabacteria group	Actinobacteria	4.27548	65.6	-	JQEV01	94	4246	3998	9/8/14	4/2/17	Contig	South American Mycobacterium bovis WGS	SAMN02902644	GCA_000749665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/665/GCA_000749665.1_ASM74966v1	-	35
Mycobacterium avium subsp. paratuberculosis Env 210	1078005	PRJNA72219	72219	Terrabacteria group	Actinobacteria	4.73614	69.3	-	AGAO01	538	4688	4165	12/29/11	5/19/17	Contig	University of Wisconsin- Madison	SAMN02472020	GCA_000240465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/465/GCA_000240465.2_ASM24046v2	22163226	Env 210
Clostridium perfringens	1502	PRJNA327440	327440	Terrabacteria group	Firmicutes	3.56437	28	-	MARO01	54	3272	3112	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323890	GCA_001949405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/405/GCA_001949405.1_ASM194940v1	28062388	JFP828
Xanthomonas campestris	339	PRJNA283309	283309	Proteobacteria	Gammaproteobacteria	5.11626	65.6	-	LHBL01	215	4452	4137	8/11/15	4/4/17	Contig	FDA	SAMN03897570	GCA_001264295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/295/GCA_001264295.1_CFSAN033078	26450732	CFSAN033078
Lactococcus lactis subsp. lactis CNCM I-1631	1042402	PRJNA67863	67863	Terrabacteria group	Firmicutes	2.51133	34.9	-	AGHX01	131	2598	2420	10/28/11	3/30/17	Contig	Washington University School of Medicine Center for Genome Sciences and Systems Biology	SAMN02436934	GCA_000284735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/735/GCA_000284735.1_ASM28473v1	22030749	CNCM I-1631
Listeria monocytogenes ATCC 19117	882095	PRJNA302838	302838	Terrabacteria group	Firmicutes	2.95082	38	chromosome:NZ_CP013288.1/CP013288.1	-	1	2976	2857	12/1/15	3/1/17	Complete Genome	ETH Zurich	SAMN04286631	GCA_001454905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/905/GCA_001454905.1_ASM145490v1	27034489	WSLC 1033
Staphylococcus epidermidis VCU129	904345	PRJNA53773	53773	Terrabacteria group	Firmicutes	2.43548	32	-	AHLJ01	36	2406	2272	2/7/12	3/23/17	Contig	J. Craig Venter Institute	SAMN00117464	GCA_000247205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/205/GCA_000247205.2_ASM24720v2	-	VCU129
Listeria monocytogenes	1639	PRJNA302838	302838	Terrabacteria group	Firmicutes	2.95075	38	chromosome:NZ_CP013289.1/CP013289.1	-	1	2977	2853	12/1/15	2/28/17	Complete Genome	ETH Zurich	SAMN04286632	GCA_001454925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/925/GCA_001454925.1_ASM145492v1	27034489	WSLC 1047
Yersinia pestis	632	PRJNA240083	240083	Proteobacteria	Gammaproteobacteria	4.7875	47.7043	chromosome 1:NZ_CP009836.1/CP009836.1; plasmid pCD:NZ_CP009835.1/CP009835.1; plasmid pMT:NZ_CP009834.1/CP009834.1; plasmid pPCP:NZ_CP009833.1/CP009833.1	-	4	4560	4308	4/7/15	3/26/17	Chromosome	Los Alamos National Laboratory	SAMN03160723	GCA_000970105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/105/GCA_000970105.1_ASM97010v1	25931590	KIM5
Pseudomonas fluorescens	294	PRJNA295937	295937	Proteobacteria	Gammaproteobacteria	5.75743	59.9	-	LKBJ01	2	5263	5083	11/6/15	3/15/17	Scaffold	Lawrence Berkeley National Laboratory	SAMN04094109	GCA_001440325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/325/GCA_001440325.1_ASM144032v1	-	GW456-L13
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.93973	38	chromosome:NZ_CP012021.1/CP012021.1	-	1	2977	2854	7/8/15	2/27/17	Complete Genome	FDA/CFSAN	SAMN03002783	GCA_001047715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/715/GCA_001047715.1_ASM104771v1	-	CFSAN023463
Listeria monocytogenes	1639	PRJNA243260	243260	Terrabacteria group	Firmicutes	2.89719	38	chromosome:NZ_CP007689.1/CP007689.1	-	1	2951	2837	6/3/15	2/27/17	Complete Genome	Cornell University	SAMN02713647	GCA_001027065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/065/GCA_001027065.1_ASM102706v1	-	L2074
Listeria monocytogenes	1639	PRJNA243081	243081	Terrabacteria group	Firmicutes	2.94748	38	chromosome:NZ_CP007688.1/CP007688.1	-	1	3025	2908	6/3/15	2/27/17	Complete Genome	Cornell University	SAMN02712416	GCA_001027085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/085/GCA_001027085.1_ASM102708v1	-	L1846
Listeria monocytogenes	1639	PRJNA243265	243265	Terrabacteria group	Firmicutes	2.9325	38	chromosome:NZ_CP007686.1/CP007686.1	-	1	2948	2838	6/3/15	2/27/17	Complete Genome	Cornell University	SAMN02713668	GCA_001027165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/165/GCA_001027165.1_ASM102716v1	-	L2624
Listeria monocytogenes	1639	PRJNA243258	243258	Terrabacteria group	Firmicutes	2.94729	38	chromosome:NZ_CP007685.1/CP007685.1	-	1	3018	2899	6/3/15	2/27/17	Complete Genome	Cornell University	SAMN02713644	GCA_001027205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/205/GCA_001027205.1_ASM102720v1	-	L2676
Listeria monocytogenes	1639	PRJNA243256	243256	Terrabacteria group	Firmicutes	2.90749	38	chromosome:NZ_CP007684.1/CP007684.1	-	1	2962	2845	6/3/15	2/27/17	Complete Genome	Cornell University	SAMN02713641	GCA_001027245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/245/GCA_001027245.1_ASM102724v1	-	L2626
Pseudomonas fluorescens NZ052	564421	PRJNA32037	32037	Proteobacteria	Gammaproteobacteria	6.82765	60.1	-	AJXH01	440	6203	5903	7/9/12	5/19/17	Contig	The Sainsbury Laboratory	SAMN02471725	GCA_000275925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/925/GCA_000275925.1_ASM27592v1	-	NZ052
Yersinia pestis 790	1345701	PRJNA208248	208248	Proteobacteria	Gammaproteobacteria	4.78191	47.6133	chromosome:NZ_CP006806.1/CP006806.1; plasmid pMT:NZ_CP006807.1/CP006807.1; plasmid pPCP:NZ_CP006808.1/CP006808.1	-	3	4550	4316	7/30/15	4/10/17	Chromosome	Los Alamos National Laboratory	SAMN02769799	GCA_001188675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/675/GCA_001188675.1_ASM118867v1	26383663	790
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.91817	38	chromosome:NZ_CP011397.1/CP011397.1	-	1	2988	2871	5/11/15	2/27/17	Complete Genome	FDA/CFSAN	SAMN02569973	GCA_001005985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/985/GCA_001005985.1_ASM100598v1	-	CFSAN007956
Staphylococcus epidermidis IS-K	904791	PRJNA53817	53817	Terrabacteria group	Firmicutes	2.52853	31.9	-	AJJS01	57	2500	2305	4/5/12	3/22/17	Contig	J. Craig Venter Institute	SAMN00189683	GCA_000257965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/965/GCA_000257965.1_SaureusISKv1.0	-	IS-K
Listeria monocytogenes	1639	PRJNA261392	261392	Terrabacteria group	Firmicutes	2.90423	38	chromosome:NZ_CP010346.1/CP010346.1	-	1	2943	2829	12/29/14	2/26/17	Complete Genome	IZSAM	SAMN03073546	GCA_000808055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/055/GCA_000808055.1_ASM80805v1	25744995	IZSAM_Lm_hs2008
Lactococcus lactis subsp. lactis YF11	1149132	PRJNA83637	83637	Terrabacteria group	Firmicutes	2.52731	34.9	-	APAV01	71	2491	2334	3/25/13	4/1/17	Contig	Tianjin University	SAMN02470885	GCA_000348965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/965/GCA_000348965.1_YF11_v1	23929487	YF11
Xanthomonas campestris	339	PRJNA283309	283309	Proteobacteria	Gammaproteobacteria	5.14192	65.4	-	LHBO01	186	4499	4158	8/11/15	4/4/17	Contig	FDA	SAMN03897573	GCA_001264345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/345/GCA_001264345.1_CFSAN033081	-	CFSAN033081
Clostridium perfringens	1502	PRJNA327441	327441	Terrabacteria group	Firmicutes	3.63969	28	-	MARP01	108	3354	3169	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323891	GCA_001949455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/455/GCA_001949455.1_ASM194945v1	28062388	JFP829
Mycobacterium avium subsp. avium DT 78	1078011	PRJNA72221	72221	Terrabacteria group	Actinobacteria	4.95983	69.2	-	AGAP01	1201	5083	4191	12/29/11	5/19/17	Contig	University of Wisconsin- Madison	SAMN02472015	GCA_000240485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/485/GCA_000240485.2_ASM24048v2	22163226	DT 78
Mycobacterium bovis	1765	PRJNA214551	214551	Terrabacteria group	Actinobacteria	4.31111	65.5	-	JQET01	108	4287	4026	9/8/14	4/2/17	Contig	South American Mycobacterium bovis WGS	SAMN02902642	GCA_000749675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/675/GCA_000749675.1_ASM74967v1	-	08-08BF2
Prochlorococcus marinus str. MIT 1320	1801623	PRJNA311922	311922	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.50045	50.3	-	LVHP01	26	2504	2381	4/25/16	4/5/17	Contig	MIT	SAMN04490362	GCA_001632075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/075/GCA_001632075.1_ASM163207v1	-	MIT 1320
Haemophilus influenzae	727	PRJNA272685	272685	Proteobacteria	Gammaproteobacteria	1.92201	38.1	-	JXMB01	26	1944	1805	2/9/15	3/25/17	Contig	Novartis Vaccines	SAMN03284975	GCA_000833895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/895/GCA_000833895.1_ASM83389v1	25814593	Hi378
Listeria monocytogenes	1639	PRJNA267024	267024	Terrabacteria group	Firmicutes	2.9045	38	chromosome:NZ_CP009897.1/CP009897.1	-	1	2941	2824	12/9/14	2/26/17	Complete Genome	Yangzhou University	SAMN03177401	GCA_000800335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/335/GCA_000800335.1_ASM80033v1	25593254	NTSN
Listeria monocytogenes	1639	PRJNA255073	255073	Terrabacteria group	Firmicutes	2.98959	38	chromosome:NZ_CP009258.1/CP009258.1	-	1	3074	2953	8/29/14	2/26/17	Complete Genome	"University of Zurich, Vetsuisse Faculty"	SAMN03003922	GCA_000746625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/625/GCA_000746625.1_ASM74662v1	25477407	Lm60
Streptococcus pneumoniae	1313	PRJNA379899	379899	Terrabacteria group	Firmicutes	2.15436	39.6955	chromosome:CP020549.1; plasmid pSpn_Hu17:CP020550.1	-	2	2324	2192	4/3/17	4/3/17	Chromosome	University of Kaiserslautern	SAMN06622699	GCA_002076835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/835/GCA_002076835.1_ASM207683v1	-	Hu17
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.90667	38	chromosome:NZ_CP007600.1/CP007600.1	-	1	2944	2834	5/6/14	2/26/17	Complete Genome	FDA/CFSAN	SAMN02318985	GCA_000681515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/515/GCA_000681515.1_ASM68151v1	-	CFSAN006122
Listeria monocytogenes	1639	PRJNA241322	241322	Terrabacteria group	Firmicutes	2.90466	38	chromosome:NZ_CP007492.1/CP007492.1	-	1	2943	2825	3/25/14	2/26/17	Complete Genome	"DC Public Health Laboratory, Washington DC"	SAMN02689320	GCA_000600015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/015/GCA_000600015.1_ASM60001v1	-	NE dc2014
Listeria monocytogenes WSLC1042	1457188	PRJNA236791	236791	Terrabacteria group	Firmicutes	2.94217	38	chromosome:NZ_CP007210.1/CP007210.1	-	1	2978	2843	2/14/14	2/26/17	Complete Genome	ETH Zurich	SAMN02743817	GCA_000568935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/935/GCA_000568935.1_ASM56893v1	24786957	WSLC1042
Leptospira interrogans serovar Hebdomadis str. R499	1049906	PRJNA74099	74099	Spirochaetes	Spirochaetia	4.70275	35.1	-	AHNI02	70	4332	3859	1/24/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436375	GCA_000244115.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/115/GCA_000244115.3_gls454096v2.0	-	R499
Xylella fastidiosa Dixon	155919	PRJNA260	260	Proteobacteria	Gammaproteobacteria	2.62233	52	-	AAAL02	32	2543	2328	7/10/02	3/30/17	Scaffold	DOE Joint Genome Institute	SAMN02441075	GCA_000166835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/835/GCA_000166835.1_ASM16683v1	-	Dixon
Pseudomonas putida	303	PRJNA253005	253005	Proteobacteria	Gammaproteobacteria	6.8581	59.7	-	JOJW01	1152	6390	6092	7/15/14	4/2/17	Contig	University of Groningen	SAMN02866106	GCA_000729805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/805/GCA_000729805.1_ASM72980v1	22752160	MC4-5222
Listeria monocytogenes WSLC1001	1457187	PRJNA236721	236721	Terrabacteria group	Firmicutes	2.95124	38	chromosome:NZ_CP007160.1/CP007160.1	-	1	3028	2894	2/12/14	2/26/17	Complete Genome	"Institute of Food, Nutrition and Health"	SAMN02743815	GCA_000568475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/475/GCA_000568475.1_ASM56847v1	24786957	WSLC1001
Shigella flexneri S5644	1210043	PRJNA170568	170568	Proteobacteria	Gammaproteobacteria	4.6891	50.7	-	AMWM01	491	5132	4234	1/20/15	8/8/17	Contig	University of Maryland School of Medicine	SAMN03025773	GCA_000826695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/695/GCA_000826695.1_ASM82669v1	-	S5644
Fusobacterium nucleatum CTI-6	1316587	PRJNA197117	197117	Fusobacteria	Fusobacteriia	2.44719	26.8	-	AXNV01	79	2449	2297	10/22/13	4/2/17	Contig	Broad Institute	SAMN02597022	GCA_000479185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/185/GCA_000479185.1_Fuso_nucl_CTI-6_V1	-	CTI-6
Bifidobacterium longum subsp. infantis	1682	PRJEB7117	270920	Terrabacteria group	Actinobacteria	2.87962	59.9	-	CCWO01	68	2716	2453	12/19/14	4/2/17	Contig	CHUV-UNIL	SAMEA2747184	GCA_000825025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/025/GCA_000825025.1_BIC1307292462.V1	-	BIC1307292462
Listeria monocytogenes serotype 1/2a str. 08-6569	1196183	PRJNA167896	167896	Terrabacteria group	Firmicutes	3.03262	38	chromosome:NZ_CP006858.1/CP006858.1	-	1	3122	3014	1/7/14	2/26/17	Complete Genome	Public Health Agency of Canada	SAMN05771122	GCA_000513595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/595/GCA_000513595.1_ASM51359v1	-	Aug-69
Listeria monocytogenes serotype 4b str. 81-0861	1196161	PRJNA167874	167874	Terrabacteria group	Firmicutes	2.9744	38	chromosome:NZ_CP006874.1/CP006874.1	-	1	3025	2904	1/7/14	2/26/17	Complete Genome	Public Health Agency of Canada	SAMN05771116	GCA_000513615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/615/GCA_000513615.1_ASM51361v1	-	81-0861
Listeria monocytogenes serotype 1/2a str. 08-6997	1196184	PRJNA167897	167897	Terrabacteria group	Firmicutes	3.03262	38	chromosome:NZ_CP006859.1/CP006859.1	-	1	3123	3015	1/7/14	2/26/17	Complete Genome	Public Health Agency of Canada	SAMN05771121	GCA_000513635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/635/GCA_000513635.1_ASM51363v1	-	Aug-97
Streptococcus suis 11611	1214148	PRJNA171412	171412	Terrabacteria group	Firmicutes	2.03893	41.2	-	ALKR01	35	2054	1949	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02470636	GCA_000440255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/255/GCA_000440255.1_version1	-	11611
Pseudomonas syringae pv. aceris	199198	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	6.30096	59.1	-	LJPM01	684	5961	5243	10/20/15	3/27/17	Scaffold	University of Toronto	SAMN03976301	GCA_001400655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/655/GCA_001400655.1_PacICMP2802	-	ICMP2802
Vibrio vulnificus	672	PRJNA276162	276162	Proteobacteria	Gammaproteobacteria	4.90461	46.6	-	JZES01	177	4595	4361	3/23/15	4/3/17	Contig	Hankuk University of Foreign Studies	SAMN03371454	GCA_000960125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/125/GCA_000960125.1_ASM96012v1	-	NV22
Bacillus licheniformis	1402	PRJNA296449	296449	Terrabacteria group	Firmicutes	4.38886	45.9	-	LKPO01	31	4444	4219	12/30/16	4/6/17	Contig	TIFN	SAMN04127601	GCA_001925045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/925/045/GCA_001925045.1_ASM192504v1	27994575	B4121
Listeria monocytogenes serotype 1/2a str. 10-0815	1196188	PRJNA167901	167901	Terrabacteria group	Firmicutes	3.03262	38	chromosome:NZ_CP006860.1/CP006860.1	-	1	3123	3015	1/7/14	2/26/17	Complete Genome	Public Health Agency of Canada	SAMN05771120	GCA_000513655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/655/GCA_000513655.1_ASM51365v1	-	10-0815
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.74466	50.7	-	CXOB01	387	5314	4572	7/18/15	2/24/17	Contig	SC	SAMEA2058005	GCA_001252315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/315/GCA_001252315.1_9870_7_8	-	144376
Bacteroides fragilis str. 3998T(B)3	1339316	PRJNA206159	206159	FCB group	Bacteroidetes/Chlorobi group	6.0989	44.1	-	JGDB01	444	5688	5195	3/20/14	4/18/17	Contig	IGS	SAMN02363970	GCA_000598485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/485/GCA_000598485.1_ASM59848v1	-	3998T(B)3
Lactobacillus reuteri	1598	PRJNA342243	342243	Terrabacteria group	Firmicutes	1.94468	38.7	-	MIML01	140	1918	1775	5/11/17	5/22/17	Contig	Seoul National University	SAMN05751486	GCA_002128715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/715/GCA_002128715.1_ASM212871v1	-	KLR2004
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.73614	66.9	-	MUJR01	10	7311	6881	2/3/17	4/10/17	Contig	University of British Columbia	SAMN05001975	GCA_001984285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/285/GCA_001984285.1_ASM198428v1	-	VC5486
Listeria monocytogenes serotype 1/2a str. 10-1047	1196190	PRJNA167903	167903	Terrabacteria group	Firmicutes	2.99821	38	chromosome:NZ_CP006861.1/CP006861.1	-	1	3075	2967	1/7/14	2/26/17	Complete Genome	Public Health Agency of Canada	SAMN05771119	GCA_000513675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/675/GCA_000513675.1_ASM51367v1	-	10-1047
Listeria monocytogenes serotype 1/2a str. 88-0478	1196176	PRJNA167889	167889	Terrabacteria group	Firmicutes	2.99435	38	chromosome:NZ_CP006862.1/CP006862.1	-	1	3074	2966	1/7/14	2/26/17	Complete Genome	Public Health Agency of Canada	SAMN05771118	GCA_000513695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/695/GCA_000513695.1_ASM51369v1	-	88-0478
Bacillus pumilus	1408	PRJNA270572	270572	Terrabacteria group	Firmicutes	3.88714	41.2	-	JXCL01	46	4044	3905	1/26/15	4/3/17	Scaffold	University of Groningen	SAMN03267269	GCA_000828345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/345/GCA_000828345.1_ASM82834v1	25767247	B4127
Burkholderia mallei	13373	PRJNA244042	244042	Proteobacteria	Betaproteobacteria	5.66956	68.4	-	JPGO01	3	6098	5519	9/4/15	4/4/17	Scaffold	Los Alamos National Laboratory	SAMN02821334	GCA_001279185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/185/GCA_001279185.1_BMJ	26744368	Turkey7
Listeria monocytogenes EGD	1334565	PRJEB4153	221836	Terrabacteria group	Firmicutes	2.90719	38	chromosome I:NC_022568.1/HG421741.1	-	1	2968	2841	9/15/13	2/26/17	Complete Genome	IP	SAMEA3138952	GCA_000582845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/845/GCA_000582845.1_SV_1	24667708	EGD
Ralstonia solanacearum	305	PRJNA347357	347357	Proteobacteria	Betaproteobacteria	5.8713	66.7	-	MOLJ01	224	5297	4996	11/14/16	4/5/17	Scaffold	University of Exeter	SAMN05879718	GCA_001876975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/975/GCA_001876975.1_ASM187697v1	-	PSS216
Vibrio cholerae	666	PRJNA278343	278343	Proteobacteria	Gammaproteobacteria	4.00443	47.4986	plasmid p98296:NZ_CM003362.1/CM003362.1	LBBS01	53	3824	3667	5/7/15	3/26/17	Scaffold	Yunnan Provincial Centre for Disease Control and Prevention	SAMN03402962	GCA_001184775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/775/GCA_001184775.1_ASM118477v1	-	YN98296
Clostridioides difficile E13	1215062	PRJEB192	222742	Terrabacteria group	Firmicutes	4.14624	28.5	-	CAMF01	262	3847	3698	10/14/13	3/16/17	Scaffold	LPBA	SAMEA3138896	GCA_000530915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/915/GCA_000530915.1_E13	24482682	E13
Shigella boydii	621	PRJNA288484	288484	Proteobacteria	Gammaproteobacteria	4.31912	51.2	-	LPTC01	924	4857	4086	12/15/16	2/26/17	Contig	"University of Maryland, School of Medicine"	SAMN04001704	GCA_001906295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/295/GCA_001906295.1_ASM190629v1	-	603122
Streptococcus salivarius	1304	PRJNA320256	320256	Terrabacteria group	Firmicutes	2.36157	39.4	-	LXOS01	87	2245	2052	4/17/17	4/21/17	Contig	State University of Campinas	SAMN04942658	GCA_002094035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/035/GCA_002094035.1_ASM209403v1	27902365	39-01 S14
Francisella tularensis	263	PRJNA288396	288396	Proteobacteria	Gammaproteobacteria	1.89968	32.3	chromosome:NZ_CP012092.1/CP012092.1	-	1	1942	1521	10/26/15	4/10/17	Chromosome	Beijing Institute of Microbiology and Epidemiology	SAMN03799293	GCA_001412545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/545/GCA_001412545.1_ASM141254v1	26679594	T01
Brucella abortus bv. 4 str. 292	520452	PRJNA33027	33027	Proteobacteria	Alphaproteobacteria	3.27294	57.2	-	ACBH01	12	3342	3130	1/23/09	3/22/17	Scaffold	Broad Institute	SAMN02595276	GCA_000157695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/695/GCA_000157695.1_ASM15769v1	-	292
Yersinia pseudotuberculosis	633	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.66915	46.8	-	CPYL01	103	4319	3957	3/22/15	4/3/17	Scaffold	SC	SAMEA859914	GCA_001136465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/465/GCA_001136465.1_5139_2_7	-	MW109-2
Lactobacillus delbrueckii subsp. delbrueckii	83684	PRJNA289288	289288	Terrabacteria group	Firmicutes	1.76619	50	-	LHPL01	147	1828	1485	8/7/15	4/3/17	Contig	"ChunLab, Inc"	SAMN03852100	GCA_001263315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/315/GCA_001263315.1_ASM126331v1	-	KACC 13439
Leptospira borgpetersenii str. 200701203	1193007	PRJNA167245	167245	Spirochaetes	Spirochaetia	3.97322	40.2	-	AKWO02	111	4822	4776	10/17/12	11/19/13	Contig	J. Craig Venter Institute	SAMN01036697	GCA_000306315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/315/GCA_000306315.2_gls454123v02	-	200701203
Listeria monocytogenes J1816	930781	PRJNA60537	60537	Terrabacteria group	Firmicutes	2.94746	38	chromosome:NC_021830.2/CP006047.2	-	1	3001	2765	7/16/13	2/28/17	Complete Genome	FDA	SAMN01813900	GCA_000195435.4	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/435/GCA_000195435.4_ASM19543v4	21551300	J1816
Campylobacter fetus subsp. fetus	32019	PRJNA285198	285198	Proteobacteria	delta/epsilon subdivisions	1.83456	33	-	LMBH01	192	1969	1671	8/5/16	4/5/17	Contig	Utrecht University	SAMN03742157	GCA_001699505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/505/GCA_001699505.1_ASM169950v1	27333878	98/v445
Xanthomonas oryzae pv. oryzae	64187	PRJNA269397	269397	Proteobacteria	Gammaproteobacteria	4.37137	63.8	-	JXDT01	451	4426	3542	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252496	GCA_001927335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/335/GCA_001927335.1_ASM192733v1	-	BXO407
Oenococcus oeni IOEB_B10	1428421	PRJNA229546	229546	Terrabacteria group	Firmicutes	1.77908	37.8	-	AZJW01	42	1820	1662	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02902400	GCA_000761865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/865/GCA_000761865.1_Oeoe_IOEB_B10_1.0	24901216	IOEB_B10
Streptococcus mitis	28037	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.86866	40.7	-	JVRN01	38	1890	1758	7/10/15	4/3/17	Contig	University of Washington	SAMN03197359	GCA_001070705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/705/GCA_001070705.1_ASM107070v1	26230489	168_SPSE
Aeromonas salmonicida subsp. salmonicida	29491	PRJEB7036	267807	Proteobacteria	Gammaproteobacteria	4.74015	58.5	-	CDDW01	128	4479	4101	11/24/14	4/3/17	Scaffold	UCONNMISEQ	SAMEA2752412	GCA_000820065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/065/GCA_000820065.1_PRJEB7036	-	CIP 103209
Vibrio parahaemolyticus EKP-021	1238216	PRJNA176651	176651	Proteobacteria	Gammaproteobacteria	5.22344	45.2	-	AZNA01	91	5336	4625	2/14/14	3/18/17	Scaffold	IGS	SAMN01923802	GCA_000571915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/915/GCA_000571915.2_vpEKP021	-	EKP-021
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.98895	38	chromosome:NC_021823.1/CP006591.1	-	1	3060	2941	7/16/13	2/26/17	Complete Genome	University of California at Davis	SAMN02203127	GCA_000438605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/605/GCA_000438605.1_ASM43860v1	-	C1-387
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.94322	38	chromosome:NC_021824.1/CP006592.1	-	1	2962	2859	7/16/13	2/26/17	Complete Genome	University of California at Davis	SAMN02203122	GCA_000438625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/625/GCA_000438625.1_ASM43862v1	-	J2-064
Lactobacillus casei	1582	PRJNA407882	407882	Terrabacteria group	Firmicutes	2.98225	46.9	-	NXEV01	94	3144	2915	10/1/17	10/1/17	Contig	McGill University	SAMN07665579	GCA_002406715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/406/715/GCA_002406715.1_ASM240671v1	-	P5
Salinispora arenicola CNX891	1137258	PRJNA169779	169779	Terrabacteria group	Actinobacteria	5.73119	69.5	-	AZWW01	92	5230	4863	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597253	GCA_000514935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/935/GCA_000514935.1_ASM51493v1	-	CNX891
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.95891	38	chromosome:NC_021837.1/CP006593.1	-	1	3042	2909	7/16/13	2/26/17	Complete Genome	University of California at Davis	SAMN02203124	GCA_000438645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/645/GCA_000438645.1_ASM43864v1	-	J2-031
Clostridium botulinum	1491	PRJNA290143	290143	Terrabacteria group	Firmicutes	3.07546	27.9	-	LGVT01	140	2960	2823	8/11/15	3/26/17	Scaffold	Anses	SAMN03876594	GCA_001264605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/605/GCA_001264605.1_ASM126460v1	26430029	12LNR13-CD
Burkholderia multivorans	87883	PRJEB12788	382511	Proteobacteria	Betaproteobacteria	6.85768	67	-	FKJW01	6	6574	6244	4/11/17	7/9/17	Contig	LM-UGent	SAMEA3876909	GCA_900079605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/605/GCA_900079605.1_ASM90007960v1	-	-
Borrelia burgdorferi IPT48	1408866	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.13893	28.4	-	AYBP01	395	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378833	GCA_000501415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/415/GCA_000501415.1_BorBurgIPT48	-	IPT48
Treponema pallidum subsp. pallidum	161	PRJNA322283	322283	Spirochaetes	Spirochaetia	1.13913	52.8	chromosome:NZ_CP016062.1/CP016062.1	-	1	1065	1003	8/25/16	4/5/17	Chromosome	"National Institute of Health, Portugal"	SAMN05150632	GCA_001713195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/195/GCA_001713195.1_ASM171319v1	-	PT_SIF1200
Rhizobium leguminosarum	384	PRJNA316801	316801	Proteobacteria	Alphaproteobacteria	8.17711	60.6	-	LWBS01	472	8195	7453	5/25/16	4/5/17	Contig	All-Russia Research Institute for Agricultural Microbiology	SAMN04606863	GCA_001652265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/265/GCA_001652265.1_ASM165226v1	-	Vaf-46
Brucella suis	29461	PRJNA243901	243901	Proteobacteria	Alphaproteobacteria	3.31743	57.2	-	JMUE01	1	3379	3141	8/19/14	4/2/17	Scaffold	Los Alamos National Laboratory	SAMN02777841	GCA_000742055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/055/GCA_000742055.1_ASM74205v1	25237024	Thompsen
Enterococcus faecalis TX2134	749518	PRJNA47191	47191	Terrabacteria group	Firmicutes	3.12143	37.1	-	AEBW01	78	3239	3086	9/9/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189127	GCA_000148065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/065/GCA_000148065.1_ASM14806v1	-	TX2134
Borrelia garinii IPT114	1408843	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.04818	28.4	-	AYAS01	491	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378810	GCA_000501775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/775/GCA_000501775.1_BorGarIPT114	-	IPT114
Streptococcus mutans TCI-196	1074151	PRJNA72045	72045	Terrabacteria group	Firmicutes	1.89819	36.8	-	AGLH01	90	1895	1799	10/6/11	3/22/17	Contig	JCVI	SAMN02436353	GCA_000229325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/325/GCA_000229325.2_SMUT5-NEX_93-196	-	TCI-196
Neisseria gonorrhoeae	485	PRJNA243883	243883	Proteobacteria	Betaproteobacteria	2.14666	52.5	-	JIBZ01	113	2517	2176	6/12/14	3/24/17	Contig	Federal Medical and Biological Agency SRI of Physical-Chemical Medicine	SAMN02720944	GCA_000705675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/675/GCA_000705675.1_n01.08	-	n01.08
Enterococcus faecium TX0133a01	749522	PRJNA47197	47197	Terrabacteria group	Firmicutes	3.07358	37.6	-	AECJ01	230	3210	3030	9/8/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189136	GCA_000148325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/325/GCA_000148325.1_ASM14832v1	-	TX0133a01
Chlamydia psittaci 10_1398_11	1238237	PRJNA176510	176510	PVC group	Chlamydiae	1.21305	38.6	-	ATNB01	153	1045	973	7/2/13	4/4/17	Scaffold	IGS	SAMN01831300	GCA_000417695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/695/GCA_000417695.2_ASM41769v2	-	10_1398_11
Bacillus amyloliquefaciens	1390	PRJEB9876	290051	Terrabacteria group	Firmicutes	4.0909	46.3	-	CYHP01	167	4072	3904	8/27/15	4/10/17	Contig	University of Liverpool	SAMEA3484407	GCA_001286965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/965/GCA_001286965.1_Bacillus_JRS8	-	-
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.77222	66.7	-	JWBW01	370	4487	4293	7/10/15	3/26/17	Contig	University of Washington	SAMN03197090	GCA_001069235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/235/GCA_001069235.1_ASM106923v1	26230489	1136_SMAL
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.13476	41.2	-	CVYP01	73	2078	1879	6/24/15	3/26/17	Contig	SC	SAMEA1032779	GCA_001175485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/485/GCA_001175485.1_6830_4_81	-	EQUI0226
[Haemophilus] parasuis	738	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	2.32904	39.9	-	MUXW01	91	2347	2117	3/3/17	3/6/17	Scaffold	TAILORED-Treatment project	SAMN06308701	GCA_002015085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/085/GCA_002015085.1_ASM201508v1	-	CCUG 3712
Pasteurella multocida subsp. multocida	44283	PRJNA244069	244069	Proteobacteria	Gammaproteobacteria	2.29901	40.4	-	JQAE01	29	2178	2094	6/14/15	4/3/17	Contig	Murdoch University	SAMN02721471	GCA_001027755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/755/GCA_001027755.1_ASM102775v1	26151935	THA
Lactobacillus rhamnosus	47715	PRJNA265918	265918	Terrabacteria group	Firmicutes	2.96624	46.6	-	JTDC01	90	3015	2770	12/11/14	4/2/17	Contig	Vavilov Institute of General Genetics	SAMN03154065	GCA_000801045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/045/GCA_000801045.1_ASM80104v1	-	116
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31278	57.2358	chromosome 1:NZ_CP018516.1/CP018516.1; chromosome 2:NZ_CP018517.1/CP018517.1	-	2	3373	3149	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932963	GCA_002191495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/495/GCA_002191495.1_ASM219149v1	28388689	BwIM_SYR_07
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.98189	38	chromosome:NC_021825.1/CP006596.1	-	1	3036	2911	7/16/13	2/26/17	Complete Genome	University of California at Davis	SAMN02203123	GCA_000438665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/665/GCA_000438665.1_ASM43866v1	-	J1-108
Bordetella bronchiseptica F4563	1331214	PRJNA202126	202126	Proteobacteria	Betaproteobacteria	5.25758	68.2	-	JGXC01	161	5062	4816	5/12/14	4/4/17	Contig	JCVI	SAMN02231451	GCA_000690115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/115/GCA_000690115.2_gbb18v01	25908122	F4563
Sinorhizobium meliloti A0641M	1194708	PRJNA167594	167594	Proteobacteria	Alphaproteobacteria	7.95371	61.9	-	AKZY01	451	8286	6782	8/13/12	5/19/17	Scaffold	University of Florence	SAMN02471745	GCA_000287455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/455/GCA_000287455.1_SMA0641M_v1	23431003	A0641M
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.46406	53.4	-	MLBM01	34	2419	2227	10/13/16	8/3/17	Contig	Institute for Medical Research	SAMN05877649	GCA_001833025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/025/GCA_001833025.1_ASM183302v1	28254972	c517
Bacillus sp. 1NLA3E	666686	PRJNA53255	53255	Terrabacteria group	Firmicutes	4.8156	38	chromosome:NC_021171.1/CP005586.1	-	1	4780	4466	4/30/13	4/17/17	Complete Genome	JGI	SAMN02598535	GCA_000242895.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/895/GCA_000242895.3_ASM24289v3	23833140	1NLA3E
Yersinia enterocolitica	630	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	4.50067	46.9	-	CPZU01	109	4243	3965	3/23/15	3/26/17	Contig	SC	SAMEA1486340	GCA_001121425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/425/GCA_001121425.1_8016_2_68	-	IP26766
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.01107	41.6	-	JJPM01	349	3526	3168	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708984	GCA_000979655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/655/GCA_000979655.1_gtlEnvA5udCFS	25756680	3.H.A.1A.1
Leuconostoc mesenteroides subsp. mesenteroides	33967	PRJNA352459	352459	Terrabacteria group	Firmicutes	2.00187	38	-	MPLH01	250	2178	1708	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981496	GCA_002092565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/565/GCA_002092565.1_ASM209256v1	28217118	LN05
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.27753	39.7	-	FPIJ01	293	1114	997	5/10/17	5/24/17	Scaffold	WTSI	SAMEA893047	GCA_900118795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/795/GCA_900118795.1_4880_2_4	-	T20
Serratia marcescens BIDMC 81	1445865	PRJNA234267	234267	Proteobacteria	Gammaproteobacteria	5.04622	59.7	-	JJMZ01	33	4779	4644	4/15/14	3/24/17	Scaffold	Broad Institute	SAMN02581400	GCA_000633695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/695/GCA_000633695.1_Serr_marc_BIDMC_81_V1	-	BIDMC 81
Listeria monocytogenes serotype 4b str. LL195	1230340	PRJEB418	179063	Terrabacteria group	Firmicutes	2.90466	38	chromosome:NC_019556.1/HF558398.1	-	1	2943	2825	11/21/12	2/26/17	Complete Genome	University of Vienna	SAMEA2272544	GCA_000318055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/055/GCA_000318055.1_ASM31805v1	-	LL195
Mannheimia haemolytica	75985	PRJNA349067	349067	Proteobacteria	Gammaproteobacteria	2.67563	41.1	-	MLYM01	68	2759	2617	10/28/16	4/5/17	Scaffold	Oklahoma State Universtiy	SAMN05919893	GCA_001856565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/565/GCA_001856565.1_ASM185656v1	-	16041065 GH
Lactobacillus brevis	1580	PRJNA386434	386434	Terrabacteria group	Firmicutes	2.45933	45.8	-	NFZZ01	29	2410	2264	6/8/17	6/10/17	Scaffold	Shenzhen Institutes of Advanced Technology	SAMN06947160	GCA_002179515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/515/GCA_002179515.1_ASM217951v1	-	3M004
Campylobacter coli 2692	887320	PRJNA52777	52777	Proteobacteria	delta/epsilon subdivisions	1.59647	31.5	-	AIMQ01	168	1670	1567	3/16/12	3/15/17	Contig	Cornell University	SAMN02428968	GCA_000253575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/575/GCA_000253575.2_ASM25357v2	-	2692
Burkholderia sp. MSh2	1506588	PRJNA251789	251789	Proteobacteria	Betaproteobacteria	8.72314	67.1	-	JPGM01	167	7959	7481	7/18/14	4/9/17	Contig	Monash University Malaysia	SAMN02840653	GCA_000731655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/655/GCA_000731655.1_ASM73165v1	25301661	MSh2
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.61877	66.4	-	LPCS01	196	7174	6781	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449411	GCA_001529645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/645/GCA_001529645.1_ASM152964v1	-	HI3392
Propionibacterium acnes HL045PA1	765068	PRJNA49167	49167	Terrabacteria group	Actinobacteria	2.5277	60.2	-	ADZA01	19	2573	2432	7/29/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189219	GCA_000144365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/365/GCA_000144365.1_ASM14436v1	-	HL045PA1
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.43651	32.6	-	CUHI01	81	2413	2284	3/31/15	3/26/17	Contig	SC	SAMEA1035090	GCA_001229105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/105/GCA_001229105.1_7068_7_65	-	105731
Proteus mirabilis	584	PRJNA319626	319626	Proteobacteria	Gammaproteobacteria	3.95547	38.8	-	LWUL01	149	3697	3493	6/1/16	4/5/17	Contig	UNIVERSITY OF MALAYA	SAMN04901708	GCA_001653835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/835/GCA_001653835.1_ASM165383v1	-	PM_125
Enterobacter cloacae UCI 49	1400154	PRJNA219301	219301	Proteobacteria	Gammaproteobacteria	5.01437	55.7	-	JCKL01	6	4931	4660	2/3/14	3/24/17	Scaffold	Broad Institute	SAMN02356629	GCA_000534055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/055/GCA_000534055.1_Ente_cloa_UCI_49_V1	-	UCI 49
Cronobacter sakazakii NBRC 102416	1218104	PRJDB277	172100	Proteobacteria	Gammaproteobacteria	4.54831	56.7	-	BAWU01	100	4462	4203	4/24/14	4/2/17	Contig	National Institute of Technology and Evaluation	SAMD00000350	GCA_000684935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/935/GCA_000684935.1_ASM68493v1	-	NBRC 102416
Klebsiella oxytoca	571	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.00014	55	-	JUZH01	623	5908	5402	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197833	GCA_001065715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/715/GCA_001065715.1_ASM106571v1	26230489	633_KOXY
Lactobacillus salivarius	1624	PRJNA321782	321782	Terrabacteria group	Firmicutes	2.07127	32.9	-	LXYY01	86	2088	1919	9/12/17	9/14/17	Contig	Seoul National University	SAMN05003812	GCA_002289925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/925/GCA_002289925.1_ASM228992v1	-	KLW009
Moraxella catarrhalis	480	PRJNA297370	297370	Proteobacteria	Gammaproteobacteria	1.93454	41.4	-	LXHM01	45	1819	1650	6/3/16	4/5/17	Contig	Drexel University College of Medicine	SAMN04122798	GCA_001656495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/495/GCA_001656495.1_ASM165649v1	26912404	N15
Mycobacterium abscessus M24	1162284	PRJNA89595	89595	Terrabacteria group	Actinobacteria	5.48862	63.9	-	AJLY02	67	5624	5396	4/30/12	3/15/17	Contig	"Universiti Malaya, Kuala Lumpur"	SAMN02471408	GCA_000260615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/615/GCA_000260615.2_M24_version02	22843600	M24
Bifidobacterium breve	1685	PRJDB4597	325619	Terrabacteria group	Actinobacteria	2.24992	58.7	-	BCXW01	39	2007	1797	6/10/16	4/5/17	Contig	Yakult Central Institute	SAMD00047607	GCA_001685925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/925/GCA_001685925.1_ASM168592v1	27340092	BR-I29
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.23912	36.7	-	LPSF01	7	2355	2248	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305166	GCA_001560525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/525/GCA_001560525.1_NG05B_C06_12	-	NG05B_C06_12
Staphylococcus saprophyticus	29385	PRJNA301343	301343	Terrabacteria group	Firmicutes	2.6641	33	-	LNPJ01	62	2625	2445	9/28/16	4/5/17	Scaffold	Tufts University	SAMN04244261	GCA_001747625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/625/GCA_001747625.1_ASM174762v1	-	CE6
Vibrio sp. HI00D65	1822216	PRJNA305749	305749	Proteobacteria	Gammaproteobacteria	5.31901	43.9	-	LWEH01	614	4874	4456	5/2/16	4/12/17	Contig	Massachusetts Institute of Technology	SAMN04580755	GCA_001635455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/455/GCA_001635455.1_ASM163545v1	-	HI00D65
Aeromonas hydrophila	644	PRJNA302468	302468	Proteobacteria	Gammaproteobacteria	4.96594	60.9	-	LRRX01	14	4594	4409	3/31/16	4/5/17	Contig	Mississippi State University	SAMN04274132	GCA_001604895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/895/GCA_001604895.1_ASM160489v1	-	ML09-121
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.17273	67.5	-	LOXJ01	70	6490	6128	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449264	GCA_001524405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/405/GCA_001524405.1_ASM152440v1	-	MSMB0011
Flavobacterium psychrophilum	96345	PRJEB21067	396411	FCB group	Bacteroidetes/Chlorobi group	2.72544	32.5	-	FYCG01	55	2519	2421	7/29/17	8/7/17	Contig	INRA	SAMEA104125240	GCA_900186445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/445/GCA_900186445.1_FPFI0701_V1	-	FI070
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.73874	47.6	-	MDZZ01	79	3441	3273	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320402	GCA_001883265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/265/GCA_001883265.1_ASM188326v1	-	97/1152-1
Pectobacterium carotovorum subsp. carotovorum	555	PRJNA269218	269218	Proteobacteria	Gammaproteobacteria	4.83692	52	-	JUJF01	37	4486	4282	12/29/14	4/2/17	Scaffold	Beijing Academy of Agriculture and Forestry Sciences	SAMN03252599	GCA_000808375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/375/GCA_000808375.1_ASM80837v1	-	BC S2
Lactobacillus crispatus	47770	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.08213	36.9	-	LYRC01	59	2117	1908	7/14/17	7/17/17	Scaffold	University of Minnesota	SAMN04498984	GCA_002218855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/855/GCA_002218855.1_ASM221885v1	-	UMNLC12
Listeria monocytogenes SLCC7179	879090	PRJEA51733	51733	Terrabacteria group	Firmicutes	2.88223	38	chromosome:NC_018593.1/FR733650.1	-	1	2947	2819	9/10/12	2/26/17	Complete Genome	ERA-NET / Spatelis	SAMEA2272571	GCA_000306985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/985/GCA_000306985.1_ASM30698v1	23339658	SLCC7179
Gardnerella vaginalis 6420B	698954	PRJNA42441	42441	Terrabacteria group	Actinobacteria	1.49359	42.2	-	ADEP01	14	1186	1115	5/21/12	3/30/17	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393777	GCA_000263575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/575/GCA_000263575.1_ASM26357v1	-	6420B
Lactobacillus paracasei subsp. paracasei Lpp125	1256216	PRJNA178444	178444	Terrabacteria group	Firmicutes	3.0135	46.1	-	ANKM01	192	3252	2900	6/11/13	4/1/17	Contig	Danone Research	SAMN02641495	GCA_000410475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/475/GCA_000410475.1_ASM41047v1	23894338	Lpp125
Staphylococcus hominis	1290	PRJEB10524	374818	Terrabacteria group	Firmicutes	2.23533	31.2	-	FBVI01	50	2215	2101	2/12/17	2/23/17	Scaffold	UNIVERSITY OF LIVERPOOL	SAMEA3515757	GCA_900006735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/006/735/GCA_900006735.1_S.hominis_J23	-	-
Staphylococcus capitis	29388	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.54184	32.8	-	JUYG01	64	2429	2348	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197860	GCA_001073835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/835/GCA_001073835.1_ASM107383v1	26230489	658_SEPI
Streptococcus oralis	1303	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.04318	40.9	-	JUVM01	149	2034	1925	7/10/15	4/3/17	Contig	University of Washington	SAMN03197932	GCA_001074055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/055/GCA_001074055.1_ASM107405v1	26230489	727_SORA
Klebsiella variicola	244366	PRJEB7831	268465	Proteobacteria	Gammaproteobacteria	5.5247	57.3	-	FLLH01	37	5489	5249	5/21/16	2/21/17	Contig	INSTITUTO NACIONAL DE SALUD	SAMEA3993663	GCA_900087855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/855/GCA_900087855.1_KVMX100_PRJEB7831_wgs.embl.gz	-	-
Achromobacter xylosoxidans	85698	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	6.90232	65	-	JTAT01	3	6423	5257	11/14/14	7/6/17	Contig	US Food and Drug Administration 	SAMN02934544	GCA_000783435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/435/GCA_000783435.1_ASM78343v1	-	FDAARGOS_88
Pseudoalteromonas sp. 13-15	1761891	PRJNA209414	209414	Proteobacteria	Gammaproteobacteria	4.05982	39.7	-	LODJ01	17	3755	3586	12/15/15	4/11/17	Contig	University of Arizona	SAMN04293673	GCA_001468205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/205/GCA_001468205.1_ASM146820v1	26868390	13-15
Listeria monocytogenes SLCC2479	882020	PRJEA51829	51829	Terrabacteria group	Firmicutes	2.97217	38	chromosome:NC_018589.1/FR733649.1	-	1	3048	2932	9/10/12	2/26/17	Complete Genome	ERA-NET / Spatelis	SAMEA2272506	GCA_000307005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/005/GCA_000307005.1_ASM30700v1	23339658	SLCC2479
Enterobacter asburiae	61645	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.68365	55.9	-	LVVE01	124	4644	4331	4/25/16	4/5/17	Contig	JCVI	SAMN04572705	GCA_001631885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/885/GCA_001631885.1_ASM163188v1	-	GN06315
Brucella sp. CMUL 034	1927136	PRJNA357030	357030	Proteobacteria	Alphaproteobacteria	3.29666	57.2	-	MRUR01	55	3380	3140	5/19/17	5/24/17	Contig	LAU	SAMN06131530	GCA_002150395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/395/GCA_002150395.1_ASM215039v1	-	CMUL 034
Pseudomonas amygdali pv. aesculi	251722	PRJNA287460	287460	Proteobacteria	Gammaproteobacteria	6.20254	58.3	-	LILL01	283	6070	5305	1/25/16	4/4/17	Contig	University of Edinburgh	SAMN03992139	GCA_001538085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/085/GCA_001538085.1_ASM153808v1	27145446	2336
Xanthomonas euvesicatoria	456327	PRJNA275493	275493	Proteobacteria	Gammaproteobacteria	5.37404	64.5	-	JZLU01	126	4856	4437	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03349327	GCA_001009075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/009/075/GCA_001009075.1_v1	26089818	490
Acinetobacter pittii	48296	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.36319	39.1	-	LLHY01	1973	4008	3729	10/27/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145743	GCA_001415895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/895/GCA_001415895.1_ASM141589v1	-	ABBL128
Leptospira santarosai serovar Arenal str. 11	1085549	PRJNA74217	74217	Spirochaetes	Spirochaetia	4.01356	41.7	-	AHQL01	407	4040	3683	2/3/12	3/30/17	Scaffold	J. Craig Venter Institute	SAMN00739380	GCA_000246395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/395/GCA_000246395.2_CLC_glsol067	-	11
Citrobacter freundii	546	PRJNA233703	233703	Proteobacteria	Gammaproteobacteria	4.97042	51.8	-	JOQX01	68	4961	4630	6/27/14	4/2/17	Contig	IGS	SAMN02680232	GCA_000714305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/305/GCA_000714305.1_ASM71430v1	-	5-172-05_S1_C1
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.92301	55.1	-	LAAW01	92	4878	4634	3/19/15	3/25/17	Contig	JCVI	SAMN03283307	GCA_000956665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/665/GCA_000956665.1_ASM95666v1	-	31613
Vibrio anguillarum 96F	990314	PRJNA63191	63191	Proteobacteria	Gammaproteobacteria	4.06217	44.3	-	AEZA01	193	3726	3585	6/22/11	3/30/17	Contig	OHSU	SAMN02470770	GCA_000257165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/165/GCA_000257165.1_ASM25716v1	21576332	96F
Kingella kingae BB631	1305797	PRJEB1654	194424	Proteobacteria	Betaproteobacteria	1.99314	46.5	-	CBRR01	1	1892	1611	8/28/13	4/2/17	Scaffold	URMITE	SAMEA2272212	GCA_000477295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/295/GCA_000477295.1_BB631	-	BB631
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.45136	54.9	-	JZXY01	82	5415	5169	3/19/15	4/6/17	Contig	JCVI	SAMN03283642	GCA_000958305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/305/GCA_000958305.1_ASM95830v1	-	44247
Listeria monocytogenes ATCC 19117	882095	PRJEA51859	51859	Terrabacteria group	Firmicutes	2.9518	38	chromosome:NC_018584.1/FR733643.1	-	1	2976	2855	9/10/12	2/26/17	Complete Genome	ERA-NET / Spatelis	SAMEA2271997	GCA_000307025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/025/GCA_000307025.1_ASM30702v1	23339658	ATCC 19117
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98937	64.1	-	FVFZ01	19	4951	4808	3/10/17	3/18/17	Contig	SC	SAMEA2070674	GCA_900132785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/785/GCA_900132785.1_10250_1_4	-	344
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.62015	66.6	-	LOWJ01	83	7975	7612	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449230	GCA_001523685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/685/GCA_001523685.1_ASM152368v1	-	FL-2-3-10-S1-D0
Streptococcus sobrinus TCI-395	1074089	PRJNA71943	71943	Terrabacteria group	Firmicutes	2.0381	43.5	-	AGHK01	379	2076	1793	10/6/11	3/30/17	Contig	JCVI	SAMN02436344	GCA_000228485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/485/GCA_000228485.2_SMUT2-NEX_62-395	-	TCI-395
Mycobacterium chelonae	1774	PRJNA323571	323571	Terrabacteria group	Actinobacteria	5.13269	64	-	MAFJ01	65	5067	4905	3/3/17	3/6/17	Contig	LNCC	SAMN05186790	GCA_002013675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/675/GCA_002013675.1_ASM201367v1	-	D16R10
Salinispora pacifica CNT855	1137266	PRJNA169784	169784	Terrabacteria group	Actinobacteria	5.20863	69.9	-	AZWS01	85	4866	4522	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597249	GCA_000514855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/855/GCA_000514855.1_ASM51485v1	-	CNT855
Elizabethkingia anophelis	1117645	PRJEB13258	317808	FCB group	Bacteroidetes/Chlorobi group	4.06897	35.4	-	FLST01	58	3759	3661	6/30/16	7/29/17	Contig	JUSTUS LIEBIG UNIVERSITY	SAMEA4051571	GCA_900092065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/065/GCA_900092065.1_ASM90009206v1	-	-
Pseudomonas sp. 35MFCvi1.1	1151123	PRJNA182410	182410	Proteobacteria	Gammaproteobacteria	6.45755	59.4	-	ARKL01	26	5976	5786	4/22/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441663	GCA_000378525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/378/525/GCA_000378525.1_ASM37852v1	-	35MFCvi1.1
Streptomyces sp. S4	889487	PRJEA66093	66093	Terrabacteria group	Actinobacteria	7.61375	72.8	-	CADY01	99	6491	6204	5/17/11	5/13/16	Scaffold	The Genome Analysis Centre	SAMEA2272132	GCA_000297715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/715/GCA_000297715.1_ASM29771v1	-	S4
Paeniclostridium sordellii	1505	PRJEB8157	277681	Terrabacteria group	Firmicutes	3.52831	27.3	-	CDNY01	30	3436	3343	3/13/15	4/4/17	Contig	WTSI	SAMEA1572087	GCA_001373015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/015/GCA_001373015.1_UMC4404	-	UMC4404
Acinetobacter sp. NIPH 2168	1217706	PRJNA183230	183230	Proteobacteria	Gammaproteobacteria	4.0849	41.5	-	APRW01	3	3785	3642	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01828132	GCA_000369705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/705/GCA_000369705.1_Acin_sp_NIPH_2168_V1	-	NIPH 2168
Klebsiella sp. NFIX44	1566153	PRJEB15812	347777	Proteobacteria	Gammaproteobacteria	5.28161	58.1	-	FNWY01	23	5207	4971	10/27/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159351	GCA_900108445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/445/GCA_900108445.1_IMG-taxon_2600255306_annotated_assembly	-	NFIX44
Bacillus sp. NSP22.2	1071073	PRJNA209218	209218	Terrabacteria group	Firmicutes	4.00093	44	-	AVCV01	20	3928	3666	10/28/13	4/9/17	Scaffold	Directorate of Groundnut Research (Indian Council of Agricultural Research)	SAMN02469739	GCA_000485775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/775/GCA_000485775.1_ASM48577v1	24356848	NSP22.2
Clostridium sp. BL8	1354301	PRJNA210530	210530	Terrabacteria group	Firmicutes	4.77623	31.3	-	AUPA01	248	4420	3902	8/15/13	4/10/17	Contig	National Centre for Cell Science	SAMN02470614	GCA_000447315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/315/GCA_000447315.1_BL8	25076986	BL8
Sphingomonas sp. LH128	473781	PRJNA172017	172017	Proteobacteria	Alphaproteobacteria	6.45752	64.9	-	ALVC01	658	6204	5601	8/27/12	5/19/17	Contig	KuLeuven	SAMN02470208	GCA_000293195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/195/GCA_000293195.2_ASM29319v2	24657861	LH128
Synechococcus sp. NKBG042902	490193	PRJDB1723	253791	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.31948	49.4	-	BAWS01	77	3228	3046	6/27/14	4/17/17	Contig	Tokyo University Agriculuture and Technology	SAMD00000348	GCA_000715475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/475/GCA_000715475.1_ASM71547v1	24285664	NKBG042902
Rhodococcus sp. Leaf233	1736302	PRJNA297956	297956	Terrabacteria group	Actinobacteria	5.53428	64.5	-	LMRO01	15	5209	5089	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151692	GCA_001426165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/165/GCA_001426165.1_Leaf233	26633631	Leaf233
Enterobacter sp. BWH 27	1329835	PRJNA201967	201967	Proteobacteria	Gammaproteobacteria	5.25217	54.9	-	JJNL01	5	5220	4924	4/15/14	4/2/17	Scaffold	Broad Institute	SAMN02138592	GCA_000633795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/795/GCA_000633795.1_Ente_cloa_complex_BWH_27_V1	-	BWH 27
Staphylococcus sp. HMSC074C02	1715199	PRJNA296328	296328	Terrabacteria group	Firmicutes	2.39508	32.7	-	LTID01	119	2356	2261	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477554	GCA_001810275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/275/GCA_001810275.1_ASM181027v1	-	HMSC074C02
Corynebacterium sp. HMSC06G04	1581126	PRJNA269895	269895	Terrabacteria group	Actinobacteria	2.62704	59.1	-	LWOC01	40	2488	2350	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03433966	GCA_001807365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/365/GCA_001807365.1_ASM180736v1	-	HMSC06G04
Arthrobacter sp. Soil762	1736401	PRJNA298127	298127	Terrabacteria group	Actinobacteria	4.52656	65	-	LMSG01	23	4257	4024	11/2/15	4/11/17	Scaffold	ETH Zurich	SAMN04155666	GCA_001428335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/335/GCA_001428335.1_Soil762	26633631	Soil762
Bradyrhizobium sp. CCH5-F6	1768753	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	8.16315	64.1	-	LSIC01	222	7720	7383	2/10/16	4/12/17	Contig	Georgia Institute of Technology	SAMN04299426	GCA_001556045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/045/GCA_001556045.1_ASM155604v1	-	CCH5-F6
Streptococcus sp. HMSC061D10	1715207	PRJNA296336	296336	Terrabacteria group	Firmicutes	2.09606	39.2	-	LTKV01	52	2044	1941	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477560	GCA_001808865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/865/GCA_001808865.1_ASM180886v1	-	HMSC061D10
Mycobacterium sp. UM_Kg27	1545693	PRJNA260997	260997	Terrabacteria group	Actinobacteria	4.50572	67.5	-	JRMM01	397	4317	3928	4/17/15	4/10/17	Contig	Universiti Malaya	SAMN03068181	GCA_000972905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/905/GCA_000972905.1_ASM97290v1	25830768	UM_Kg27
Pantoea sp. UBA4549	1947033	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.64718	56.2	-	DGLH01	18	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455280	GCA_002387285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/285/GCA_002387285.1_ASM238728v1	28894102	-
Prevotella sp. P4-67	2024227	PRJNA396820	396820	FCB group	Bacteroidetes/Chlorobi group	3.03446	51.9	-	NPJL01	82	2622	2500	8/14/17	8/16/17	Contig	University of Ljubljana	SAMN07431216	GCA_002251325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/325/GCA_002251325.1_ASM225132v1	-	P4-67
Enterococcus sp. HMSC072F02	1715210	PRJNA296339	296339	Terrabacteria group	Firmicutes	2.81829	38.1	-	LTOQ01	109	2882	2680	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498665	GCA_001837725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/725/GCA_001837725.1_ASM183772v1	-	HMSC072F02
Methylobacterium sp. Leaf106	1736255	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.75932	67.3	-	LMNB01	36	4451	4287	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151635	GCA_001422895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/895/GCA_001422895.1_Leaf106	26633631	Leaf106
Nocardioides sp. REDSEA-S22_B2	1811549	PRJNA289734	289734	Terrabacteria group	Actinobacteria	3.75717	71.8	-	LUPF01	94	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534607	GCA_001627255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/255/GCA_001627255.1_ASM162725v1	27377622	-
Marinobacter sp. UBA2698	1946817	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.21079	55.6	-	DELK01	34	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451363	GCA_002354375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/375/GCA_002354375.1_ASM235437v1	28894102	-
Acidovorax sp. 39-64-12	1970313	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	4.116	63.6	-	NCJC01	93	3853	3713	8/16/17	8/16/17	Contig	None	SAMN06622226	GCA_002282335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/335/GCA_002282335.1_ASM228233v1	-	-
Psychrobacter sp. UBA2769	1947348	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.14831	43.1	-	DEIR01	26	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06454302	GCA_002352555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/555/GCA_002352555.1_ASM235255v1	28894102	-
Alcanivorax sp. UBA2685	1945978	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.41305	64.7	-	DELX01	63	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06453896	GCA_002354605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/605/GCA_002354605.1_ASM235460v1	28894102	-
Paenibacillus sp. MAEPY2	1395587	PRJNA217885	217885	Terrabacteria group	Firmicutes	7.4708	45.9	-	AWUK01	129	6728	6494	11/25/13	4/9/17	Contig	Monash University	SAMN02343193	GCA_000499205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/205/GCA_000499205.1_MAEPY2_1.0	24526641	MAEPY2
Ruminococcus sp. CAG:9-related_41_34	1897021	PRJNA321218	321218	Terrabacteria group	Firmicutes	2.39837	42.3	-	MNTO01	208	2192	1795	12/23/16	12/23/16	Scaffold	None	SAMN05717298	GCA_001917045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/045/GCA_001917045.1_ASM191704v1	27819664	-
Thioalkalivibrio sp. ALMg3	1158163	PRJNA182461	182461	Proteobacteria	Gammaproteobacteria	2.79991	66.5	-	ARLM01	22	2691	2571	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441336	GCA_000381225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/225/GCA_000381225.1_ASM38122v1	-	ALMg3
Bacteroides sp. AR20	93974	PRJEB16891	350954	FCB group	Bacteroidetes/Chlorobi group	6.06536	42.7	-	FOBY01	28	4736	4543	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910431	GCA_900109965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/965/GCA_900109965.1_IMG-taxon_2593339260_annotated_assembly	-	AR20
Prochlorococcus sp. W11	613202	PRJNA169368	169368	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.766829	30.6	-	ALPI01	158	-	-	8/20/12	7/29/15	Contig	Massachusetts Institute of Technology	SAMN02470447	GCA_000291945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/945/GCA_000291945.1_ProW11_v1.0	22895163	-
Actinomyces sp. CtC 72	1937003	PRJNA362692	362692	Terrabacteria group	Actinobacteria	3.4231	68	-	MTPX01	114	3076	2155	5/22/17	5/24/17	Contig	"MACS Agaharkar Research Institute, Pune"	SAMN06245908	GCA_002154335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/335/GCA_002154335.1_ASM215433v1	-	CtC 72
Campylobacter sp. BCW_6879	1903292	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.63391	30.5	-	MJWY01	31	1706	1489	10/4/16	4/21/17	Scaffold	University of California at Davis	SAMN03360226	GCA_001762515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/515/GCA_001762515.1_ASM176251v1	-	BCW_6879
Neisseria sp. HMSC066B07	1739476	PRJNA300126	300126	Proteobacteria	Betaproteobacteria	2.24964	49	-	LTUT01	138	2159	2024	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480396	GCA_001814445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/445/GCA_001814445.1_ASM181444v1	-	HMSC066B07
Rothia sp. ND6WE1A	1848190	PRJNA244670	244670	Terrabacteria group	Actinobacteria	2.31516	52.3	-	LXTU01	77	2141	1996	7/12/16	4/13/17	Contig	US Naval Research laboratory	SAMN04933465	GCA_001683935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/935/GCA_001683935.1_ASM168393v1	-	ND6WE1A
Rhizobium sp. AP16	1144306	PRJNA83035	83035	Proteobacteria	Alphaproteobacteria	6.49762	60.2	-	AJVM01	96	6176	5997	7/25/12	5/19/17	Contig	Oak Ridge National Lab	SAMN00839614	GCA_000281735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/735/GCA_000281735.1_ASM28173v1	23045501	AP16
Halomonas sp. DSM 26667	1761787	PRJEB15965	348294	Proteobacteria	Gammaproteobacteria	5.47292	54.7	-	FNEF01	61	5115	4876	10/20/16	7/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487867	GCA_900099955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/955/GCA_900099955.1_IMG-taxon_2619618960_annotated_assembly	-	DSM 26667
Methylophaga sp. UBA3996	1946891	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.00389	42.9	-	DGBU01	84	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451731	GCA_002384885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/885/GCA_002384885.1_ASM238488v1	28894102	-
Chryseobacterium sp. CBo1	1869230	PRJNA326914	326914	FCB group	Bacteroidetes/Chlorobi group	4.50663	34.7	-	MAUH01	71	4163	4011	7/25/16	4/13/17	Contig	University of Liverpool	SAMN05294120	GCA_001693475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/475/GCA_001693475.1_ASM169347v1	-	CBo1
Mesorhizobium sp. LNJC405B00	1287281	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.63592	62.6	-	AYWC01	66	6480	5974	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359678	GCA_000502615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/615/GCA_000502615.1_Mloti_LNJC405B00	-	LNJC405B00
Variovorax sp. JGI 001013-H06	1167756	PRJNA179469	179469	Proteobacteria	Betaproteobacteria	0.188129	62.8	-	ATUC01	39	-	-	7/9/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441243	GCA_000420005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/005/GCA_000420005.1_ASM42000v1	-	JGI 001013-H06
Xanthomonas translucens pv. graminis	134874	PRJNA319536	319536	Proteobacteria	Gammaproteobacteria	4.21423	68.6	-	LWSW01	386	3549	3283	6/8/16	4/5/17	Scaffold	The Connecticut Agricultural Experiment Station	SAMN04893620	GCA_001659905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/905/GCA_001659905.1_ASM165990v1	-	UPB437
Microbacterium sp. MEJ108Y	1587523	PRJNA270652	270652	Terrabacteria group	Actinobacteria	3.66995	68	-	JXQX01	43	3594	3486	2/9/15	4/10/17	Contig	University of Chicago	SAMN03267959	GCA_000834175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/175/GCA_000834175.1_ASM83417v1	-	MEJ108Y
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.80899	58.7	-	LNXJ01	66	4613	4465	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339874	GCA_001681925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/925/GCA_001681925.1_ASM168192v1	-	S2684
Butyrivibrio sp. INlla21	1520811	PRJEB17595	351944	Terrabacteria group	Firmicutes	3.34312	42.2	-	FPCC01	73	3213	3082	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02910342	GCA_900116875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/875/GCA_900116875.1_IMG-taxon_2593339243_annotated_assembly	-	INlla21
Sphingopyxis sp. REDSEA-S22_B5	1811566	PRJNA289734	289734	Proteobacteria	Alphaproteobacteria	3.05719	65	-	LURA01	103	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534655	GCA_001628055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/055/GCA_001628055.1_ASM162805v1	27377622	-
Listeria monocytogenes SLCC5850	882096	PRJEA51861	51861	Terrabacteria group	Firmicutes	2.90714	38	chromosome:NC_018592.1/FR733647.1	-	1	2969	2836	9/10/12	2/26/17	Complete Genome	ERA-NET / Spatelis	SAMEA2272672	GCA_000307045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/045/GCA_000307045.1_ASM30704v1	23339658	SLCC5850
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.71349	35.4	-	LZHO01	94	2673	2455	7/21/16	4/10/17	Contig	University of Texas at Austin	SAMN05179615	GCA_001690895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/895/GCA_001690895.1_ASM169089v1	-	Nev5-1
Klebsiella michiganensis	1134687	PRJNA285085	285085	Proteobacteria	Gammaproteobacteria	6.39092	55.4	-	LDZM01	116	6233	5914	6/23/15	2/21/17	Scaffold	UCSF	SAMN03737905	GCA_001038305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/305/GCA_001038305.1_ASM103830v1	-	GY84G39
Achromobacter sp. 2789STDY5608619	1806486	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	6.62631	67.5	-	CYTS01	54	6140	5957	9/19/15	4/11/17	Scaffold	SC	SAMEA2247584	GCA_001299175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/175/GCA_001299175.1_11861_6_13	-	2789STDY5608619
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.56618	50.8	-	MPQR01	53	2488	2401	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016264	GCA_002020645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/645/GCA_002020645.1_ASM202064v1	-	-
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79021	32.3	-	FQLX01	14	2792	2622	11/23/16	4/5/17	Contig	SC	SAMEA3449121	GCA_900126895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/895/GCA_900126895.1_17175_3_65	-	3688STDY6125119
Klebsiella quasipneumoniae	1463165	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.81441	57.2	-	NJCN01	134	6010	5645	8/2/17	8/4/17	Contig	JCVI	SAMN05960932	GCA_002239895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/895/GCA_002239895.1_ASM223989v1	-	G4584
Fibrobacter sp. UBA4373	1946538	PRJNA348753	348753	FCB group	Fibrobacteres	2.21053	49	-	DGSB01	96	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451337	GCA_002390045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/045/GCA_002390045.1_ASM239004v1	28894102	-
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.86861	67.5	-	LPKT01	113	7067	6702	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449626	GCA_001533115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/115/GCA_001533115.1_ASM153311v1	-	MSMB660WGS
Xanthomonas axonopodis pv. manihotis str. IBSBF 726	1185699	PRJNA163793	163793	Proteobacteria	Gammaproteobacteria	4.83291	65.2	-	AKEE01	140	4291	3965	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090335	GCA_000266265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/265/GCA_000266265.1_IBSBF726	22699502	IBSBF 726
Candidatus Microthrix sp. UBA3522	1946184	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.79168	41.2	-	DFPF01	100	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457866	GCA_002377115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/115/GCA_002377115.1_ASM237711v1	28894102	-
Catabacter sp. UBA3944	1946264	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.71861	50.4	-	DGDU01	58	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457051	GCA_002385605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/605/GCA_002385605.1_ASM238560v1	28894102	-
Catabacter sp. UBA3929	1946263	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.40006	42.6	-	DGEJ01	32	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457322	GCA_002385905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/905/GCA_002385905.1_ASM238590v1	28894102	-
Candidatus Microthrix sp. UBA3508	1946183	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.48558	42	-	DFPT01	130	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450564	GCA_002377405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/405/GCA_002377405.1_ASM237740v1	28894102	-
Xanthomonas axonopodis pv. manihotis str. NCPPB 1159	1185700	PRJNA163795	163795	Proteobacteria	Gammaproteobacteria	4.79798	65.2	-	AKEF01	128	4236	3916	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090336	GCA_000266285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/285/GCA_000266285.1_NCPPB1159	22699502	NCPPB 1159
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.85728	67.6	-	LPKR01	115	7054	6692	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449624	GCA_001533205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/205/GCA_001533205.1_ASM153320v1	-	MSMB658WGS
Fibrobacter sp. UBA4375	1946539	PRJNA348753	348753	FCB group	Fibrobacteres	2.91595	52.1	-	DGRZ01	116	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451343	GCA_002391195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/195/GCA_002391195.1_ASM239119v1	28894102	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.50395	57.6	-	NQAO01	146	5626	5280	8/11/17	8/15/17	Contig	JCVI	SAMN07450550	GCA_002246675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/675/GCA_002246675.1_ASM224667v1	-	KPCRETH06
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.84511	32.3	-	FQMC01	18	2867	2692	11/24/16	4/6/17	Contig	SC	SAMEA3449122	GCA_900126905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/905/GCA_900126905.1_17175_3_66	-	3688STDY6125120
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.51341	50.9	-	MPQS01	56	2452	2360	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016265	GCA_002020675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/675/GCA_002020675.1_ASM202067v1	-	-
Achromobacter sp. 2789STDY5608624	1806479	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	6.94675	67.4	-	CYTF01	111	6448	6205	9/19/15	4/11/17	Scaffold	SC	SAMEA2247589	GCA_001299195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/195/GCA_001299195.1_11861_6_18	-	2789STDY5608624
Klebsiella michiganensis	1134687	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.20169	55.5	-	JVXE01	313	6173	5796	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197212	GCA_001052525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/525/GCA_001052525.1_ASM105252v1	26230489	1246_KOXY
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.57083	35.1	-	LZEI01	30	2374	2282	7/26/16	4/5/17	Contig	University of Texas at Austin	SAMN05179581	GCA_001693745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/745/GCA_001693745.1_ASM169374v1	-	wkB72
Bacillus velezensis	492670	PRJNA398258	398258	Terrabacteria group	Firmicutes	4.17993	46.2	chromosome:NZ_CP023133.1/CP023133.1	-	1	4267	3949	9/12/17	9/20/17	Chromosome	Universidade Federal de Pelotas	SAMN07504415	GCA_002290045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/045/GCA_002290045.1_ASM229004v1	-	J01
Sphingopyxis sp. REDSEA-S40_B6	1811573	PRJNA289734	289734	Proteobacteria	Alphaproteobacteria	3.4501	65.2	-	LURH01	73	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534662	GCA_001628085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/085/GCA_001628085.1_ASM162808v1	27377622	-
Butyrivibrio sp. CAG:318	1262761	PRJEB830	206875	Terrabacteria group	Firmicutes	2.31239	41.9	-	CBFF01	52	2157	2127	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138478	GCA_000431815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/815/GCA_000431815.1_MGS318	-	-
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.78601	58.8	-	LNXK01	58	4593	4451	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339875	GCA_001681955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/955/GCA_001681955.1_ASM168195v1	-	S3584
Microbacterium sp. SA39	1263625	PRJNA270387	270387	Terrabacteria group	Actinobacteria	3.8629	68.3	-	JXRU01	39	3761	3642	3/20/15	4/10/17	Contig	Austrian Institute of Technology	SAMN03266144	GCA_000967865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/865/GCA_000967865.1_ASM96786v1	25977426	SA39
Xanthomonas translucens pv. poae	227946	PRJNA319549	319549	Proteobacteria	Gammaproteobacteria	4.57443	68.1	-	LWSU01	296	3859	3593	6/8/16	4/5/17	Scaffold	The Connecticut Agricultural Experiment Station	SAMN04893727	GCA_001659965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/965/GCA_001659965.1_ASM165996v1	-	B99
Variovorax sp. JGI 0001014-I04	1286833	PRJNA187226	187226	Proteobacteria	Betaproteobacteria	0.253116	63.6	-	AXXF01	47	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440758	GCA_000485055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/055/GCA_000485055.1_ASM48505v1	-	JGI 0001014-I04
Mesorhizobium sp. LSHC414A00	1287287	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.57285	62.5	-	AYWA01	39	6476	6031	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359680	GCA_000502635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/635/GCA_000502635.1_Mloti_LSHC414A00	-	LSHC414A00
Chryseobacterium sp. VT16-26	1945581	PRJNA369709	369709	FCB group	Bacteroidetes/Chlorobi group	4.40396	36.1	-	MVAG01	255	4030	3906	6/8/17	6/10/17	Contig	Human Microbiology Institute	SAMN06292066	GCA_002177115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/115/GCA_002177115.1_ASM217711v1	-	VT16-26
Methylophaga sp. UBA4512	1946894	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.56627	43.5	-	DGMS01	11	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450761	GCA_002388525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/525/GCA_002388525.1_ASM238852v1	28894102	-
Halomonas sp. HL-93	1666906	PRJNA283228	283228	Proteobacteria	Gammaproteobacteria	3.53303	56.4	-	LJST01	257	3469	3403	10/14/15	6/23/16	Scaffold	Pacific Northwest National Laboratroy	SAMN03785504	GCA_001314745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/745/GCA_001314745.1_ASM131474v1	26497460	-
Rhizobium sp. CF122	1144312	PRJNA83047	83047	Proteobacteria	Alphaproteobacteria	6.1423	59.9	-	AKKA01	130	6038	5715	7/27/12	5/19/17	Contig	Oak Ridge National Lab	SAMN00839620	GCA_000282035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/035/GCA_000282035.1_CF122.fsa	23045501	CF122
Rothia sp. Olga	1979525	PRJNA375758	375758	Terrabacteria group	Actinobacteria	2.75601	55.6	-	NDFM01	401	2330	2201	8/1/17	8/21/17	Contig	SysMilk	SAMN06718477	GCA_002238135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/135/GCA_002238135.1_ASM223813v1	-	Olga
Neisseria sp. HMSC065C04	1739524	PRJNA300175	300175	Proteobacteria	Betaproteobacteria	2.31438	48.8	-	LTTB01	48	2260	2121	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480440	GCA_001815375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/375/GCA_001815375.1_ASM181537v1	-	HMSC065C04
Campylobacter sp. BCW_6889	1903293	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.94446	30.1	-	MJWZ01	81	2093	1910	10/4/16	4/13/17	Scaffold	University of California at Davis	SAMN03360227	GCA_001762535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/535/GCA_001762535.1_ASM176253v1	-	BCW_6889
Actinomyces sp. Marseille-P3257	1871028	PRJEB18043	354748	Terrabacteria group	Actinobacteria	2.39562	63.8	-	FTPB01	4	2119	1995	1/17/17	4/17/17	Contig	URMITE	SAMEA17745418	GCA_900155595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/595/GCA_900155595.1_PRJEB18043	-	Marseille-P3257
Prochlorococcus sp. W12	613203	PRJNA169370	169370	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.423437	29.6	-	ALPJ01	232	-	-	8/20/12	7/29/15	Contig	Massachusetts Institute of Technology	SAMN02470448	GCA_000291965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/965/GCA_000291965.1_ProW12_v1.0	22895163	-
Bacteroides sp. 1_1_14	469585	PRJNA38765	38765	FCB group	Bacteroidetes/Chlorobi group	6.44642	42.9	-	ACRP01	57	5108	4761	4/28/10	1/9/14	Scaffold	Broad Institute	SAMN02463759	GCA_000162515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/515/GCA_000162515.1_ASM16251v1	-	1_1_14
Thioalkalivibrio sp. ALD1	1158150	PRJNA182462	182462	Proteobacteria	Gammaproteobacteria	2.64411	65.2	-	ARLN01	12	2587	2470	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441337	GCA_000381245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/245/GCA_000381245.1_ASM38124v1	-	ALD1
Ruminococcus sp. CAG:108-related_41_35	1897020	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.63592	41.3	-	MNTQ01	21	1553	1495	12/23/16	12/23/16	Scaffold	None	SAMN05717300	GCA_001917065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/065/GCA_001917065.1_ASM191706v1	27819664	-
Paenibacillus sp. MAEPY1	1395586	PRJNA217884	217884	Terrabacteria group	Firmicutes	7.47851	45.9	-	AWUJ01	183	6743	6482	11/25/13	4/9/17	Contig	Monash University	SAMN02343192	GCA_000499305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/305/GCA_000499305.1_MAEPY1_1.0	24526641	MAEPY1
Acidovorax sp. 65-7	1895692	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	4.18317	64.2	-	MKRM01	219	4027	3011	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660503	GCA_001897915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/915/GCA_001897915.1_ASM189791v1	-	-
Marinobacter sp. UBA2678	1946815	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	5.09964	56.5	-	DEME01	249	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06452578	GCA_002354755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/755/GCA_002354755.1_ASM235475v1	28894102	-
Nocardioides sp. REDSEA-S30_B4	1811552	PRJNA289734	289734	Terrabacteria group	Actinobacteria	3.67592	71.9	-	LUPI01	104	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534610	GCA_001627265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/265/GCA_001627265.1_ASM162726v1	27377622	-
Methylobacterium sp. Leaf108	1736256	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.46577	69.6	-	LMND01	35	4116	3951	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151636	GCA_001423265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/265/GCA_001423265.1_Leaf108	26633631	Leaf108
Enterococcus sp. HMSC074F07	1715033	PRJNA296160	296160	Terrabacteria group	Firmicutes	2.93366	37.6	-	LTOL01	273	3017	2866	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498572	GCA_001837845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/845/GCA_001837845.1_ASM183784v1	-	HMSC074F07
Prevotella sp. P4-119	2024218	PRJNA396820	396820	FCB group	Bacteroidetes/Chlorobi group	3.17718	45.7	-	NPJB01	112	2632	2502	8/14/17	8/16/17	Contig	University of Ljubljana	SAMN07431226	GCA_002251345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/345/GCA_002251345.1_ASM225134v1	-	P4-119
Pantoea sp. UBA4570	1947034	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.18078	56.6	-	DGKM01	252	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450524	GCA_002387765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/765/GCA_002387765.1_ASM238776v1	28894102	-
Mycobacterium sp. UM_Kg17	1545692	PRJNA260996	260996	Terrabacteria group	Actinobacteria	4.23784	67.6	-	JRML01	192	3958	3724	4/17/15	4/10/17	Contig	Universiti Malaya	SAMN03068180	GCA_000972915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/915/GCA_000972915.1_ASM97291v1	25830768	UM_Kg17
Streptococcus sp. HMSC034B05	1715022	PRJNA296149	296149	Terrabacteria group	Firmicutes	1.90183	37.8	-	LTKL01	50	1886	1756	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04495797	GCA_001809055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/055/GCA_001809055.1_ASM180905v1	-	HMSC034B05
Bradyrhizobium sp. CCH4-A6	1768759	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	5.29995	60.9	-	LSIM01	249	5151	4852	2/10/16	4/12/17	Contig	Georgia Institute of Technology	SAMN04299437	GCA_001556245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/245/GCA_001556245.1_ASM155624v1	-	CCH4-A6
Arthrobacter sp. Soil763	1736402	PRJNA298127	298127	Terrabacteria group	Actinobacteria	3.54043	68.9	-	LMSH01	9	3278	3165	11/2/15	4/11/17	Scaffold	ETH Zurich	SAMN04155667	GCA_001428365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/365/GCA_001428365.1_Soil763	26633631	Soil763
Corynebacterium sp. HMSC08A12	1581134	PRJNA269903	269903	Terrabacteria group	Actinobacteria	2.21578	62.9	-	LWNW01	31	1991	1902	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03434239	GCA_001807485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/485/GCA_001807485.1_ASM180748v1	-	HMSC08A12
Staphylococcus sp. HMSC069D12	1715216	PRJNA296345	296345	Terrabacteria group	Firmicutes	2.28325	32.6	-	LTHW01	49	2221	2087	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477563	GCA_001810405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/405/GCA_001810405.1_ASM181040v1	-	HMSC069D12
Enterobacter sp. ZOR0014	1339232	PRJNA205576	205576	Proteobacteria	Gammaproteobacteria	4.84563	54.9	-	JTLF01	412	4672	4472	12/8/14	4/9/17	Scaffold	University of Oregon	SAMN03021527	GCA_000798855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/855/GCA_000798855.1_ZOR0014.1	-	ZOR0014
Rhodococcus sp. EPR-279	1813678	PRJNA314738	314738	Terrabacteria group	Actinobacteria	5.35168	64.8	-	LVCW01	602	5366	4750	4/14/16	4/12/17	Contig	Zhejiang Wanli University	SAMN04514661	GCA_001647175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/175/GCA_001647175.1_ASM164717v1	-	EPR-279
Synechococcus sp. GFB01	1662190	PRJNA286005	286005	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.33981	67.8	-	LFEK01	125	2513	1850	6/24/15	4/11/17	Contig	Federal University of Para	SAMN03736791	GCA_001039265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/265/GCA_001039265.1_ASM103926v1	26272565	GFB01
Sphingomonas sp. Mn802worker	629773	PRJNA67957	67957	Proteobacteria	Alphaproteobacteria	3.18546	66.5	-	AORY01	21	3102	2991	4/24/13	4/17/17	Contig	JGI	SAMN00626992	GCA_000382485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/485/GCA_000382485.1_Mn802	23563954	Mn802worker
Clostridium sp. Ade.TY	1391647	PRJNA216131	216131	Terrabacteria group	Firmicutes	3.1139	26.7	-	AVSV01	66	3064	2944	11/22/13	4/9/17	Contig	Monash University	SAMN02324738	GCA_000498355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/355/GCA_000498355.1_Ade.TY_1.0	24604640	Ade.TY
Bacillus sp. 17376	977905	PRJNA62235	62235	Terrabacteria group	Firmicutes	4.69687	42.5	-	AWXY01	69	4383	4166	11/25/13	4/17/17	Scaffold	Ankara University Biotechnology Institute	SAMN02469311	GCA_000498695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/695/GCA_000498695.1_AUBTEML1	24385571	17376
Klebsiella sp. NFIX19	1566170	PRJEB16860	351022	Proteobacteria	Gammaproteobacteria	5.2173	58.2	-	FOAU01	21	5109	4881	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159295	GCA_900109625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/625/GCA_900109625.1_IMG-taxon_2600255291_annotated_assembly	-	NFIX19
Flavobacterium sp. fv08	1761784	PRJEB16932	351095	FCB group	Bacteroidetes/Chlorobi group	5.56731	33.6	-	FODK01	18	4682	4565	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487978	GCA_900110335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/335/GCA_900110335.1_IMG-taxon_2615840595_annotated_assembly	-	FV08
Acinetobacter sp. CIP 101966	1144662	PRJNA183229	183229	Proteobacteria	Gammaproteobacteria	3.52846	42.9	-	APRX01	18	3453	3169	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01828131	GCA_000369725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/725/GCA_000369725.1_Acin_sp_CIP_101966_V1	-	CIP 101966
Paeniclostridium sordellii	1505	PRJEB8158	277682	Terrabacteria group	Firmicutes	3.44186	27.4	-	CEKU01	32	3360	3245	3/13/15	4/4/17	Contig	WTSI	SAMEA1572074	GCA_001373035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/035/GCA_001373035.1_R15892	-	R15892
Streptomyces sp. CNS615	1169158	PRJNA178490	178490	Terrabacteria group	Actinobacteria	7.34963	72.7	-	AQPE01	69	6247	5962	4/15/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02441407	GCA_000365385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/385/GCA_000365385.1_ASM36538v1	-	CNS615
Pseudomonas sp. 45MFCol3.1	1151124	PRJNA185298	185298	Proteobacteria	Gammaproteobacteria	6.56265	59.4	-	ARMZ01	21	6028	5858	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440990	GCA_000382025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/025/GCA_000382025.1_ASM38202v1	-	45MFCol3.1
Elizabethkingia anophelis	1117645	PRJEB14302	358788	FCB group	Bacteroidetes/Chlorobi group	3.95658	35.6	-	FTRB01	41	3597	3498	1/20/17	5/31/17	Contig	INSTITUT PASTEUR	SAMEA50777668	GCA_900157025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/025/GCA_900157025.1_ASM90015702v1	-	-
Salinispora pacifica CNY202	1305843	PRJNA195684	195684	Terrabacteria group	Actinobacteria	5.18306	69.6	-	AXVR01	204	4967	4454	10/25/13	4/2/17	Contig	DOE Joint Genome Institute	SAMN02440773	GCA_000484695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/695/GCA_000484695.1_ASM48469v1	-	CNY202
Mycobacterium chelonae	1774	PRJNA323571	323571	Terrabacteria group	Actinobacteria	5.0871	63.9	-	MAER01	49	5085	4924	3/3/17	3/6/17	Contig	LNCC	SAMN05186770	GCA_002013725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/725/GCA_002013725.1_ASM201372v1	-	96-1717
Streptococcus sobrinus TCI-396	1074090	PRJNA71945	71945	Terrabacteria group	Firmicutes	2.08788	43.5	-	AGHL01	306	2101	1866	10/6/11	3/30/17	Contig	JCVI	SAMN02436542	GCA_000228505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/505/GCA_000228505.2_SMUT2-NEX_78-396	-	TCI-396
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.51786	66.7	-	LOWP01	100	7971	7583	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449237	GCA_001523985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/985/GCA_001523985.1_ASM152398v1	-	FL-4-2-10-S1-D0
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96808	64.1	-	FVHK01	19	4904	4738	3/10/17	3/18/17	Contig	SC	SAMEA2070777	GCA_900133335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/335/GCA_900133335.1_10250_1_37	-	377
Aeromonas veronii PhIn2	1202454	PRJNA169110	169110	Proteobacteria	Gammaproteobacteria	4.30055	58.8	-	ANNT01	1899	-	-	6/10/13	1/8/14	Contig	University of Georgia	SAMN02471783	GCA_000409545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/545/GCA_000409545.1_PhIn2	-	PhIn2
Klebsiella aerogenes	548	PRJNA265010	265010	Proteobacteria	Gammaproteobacteria	5.1365	54.9	-	JSWV01	52	5054	4817	5/14/15	4/6/17	Contig	University of Malaya	SAMN03145041	GCA_001006555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/555/GCA_001006555.1_ASM100655v1	-	B3
Kingella kingae KK238	1348237	PRJEB4185	209622	Proteobacteria	Betaproteobacteria	1.99314	46.6	-	CBRP01	1	1889	1633	8/27/13	4/2/17	Scaffold	URMITE	SAMEA2272582	GCA_000477315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/315/GCA_000477315.1_G124	-	KK238
Vibrio anguillarum	55601	PRJNA336161	336161	Proteobacteria	Gammaproteobacteria	4.0149	44.5	-	MCJC01	217	3657	3374	9/1/16	4/5/17	Contig	USFDA	SAMN05505091	GCA_001718015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/015/GCA_001718015.1_Va_14181_F1	-	ATCC 14181
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.0447	55	-	LAAZ01	74	5031	4779	3/19/15	3/25/17	Contig	JCVI	SAMN03283310	GCA_000956675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/675/GCA_000956675.1_ASM95667v1	-	28585
Citrobacter freundii ATCC 8090 = MTCC 1658	1006003	PRJNA65519	65519	Proteobacteria	Gammaproteobacteria	4.89964	51.7	-	JMTA01	129	4869	4548	7/28/14	4/2/17	Contig	UW-GEL	SAMN02742758	GCA_000734905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/734/905/GCA_000734905.1_ASM73490v1	-	ATCC 8090
Leptospira santarosai	28183	PRJNA280847	280847	Spirochaetes	Spirochaetia	4.24639	41.7	-	LAYP01	204	4372	3732	5/5/15	4/11/17	Scaffold	Universidade Federal de Pelotas	SAMN03470253	GCA_000988105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/105/GCA_000988105.1_ASM98810v1	26272577	U160
Acinetobacter pittii	48296	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.91074	38.8	-	LLGX01	342	3882	3636	10/27/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145715	GCA_001415935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/935/GCA_001415935.1_ASM141593v1	-	ABBL096
Xanthomonas euvesicatoria	456327	PRJNA275484	275484	Proteobacteria	Gammaproteobacteria	5.30818	64.5	-	JZRY01	101	4788	4387	5/18/15	4/3/17	Scaffold	Universidade de Sao Paulo	SAMN03349318	GCA_001010095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/095/GCA_001010095.1_ASM101009v1	-	181
Pseudomonas amygdali pv. dendropanacis	235272	PRJNA287460	287460	Proteobacteria	Gammaproteobacteria	5.87387	58.1	-	LIIE01	218	5653	4943	1/25/16	4/4/17	Contig	University of Edinburgh	SAMN03992196	GCA_001538145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/145/GCA_001538145.1_ASM153814v1	27145446	CFBP 3226
Brucella sp. CMUL 035	1927135	PRJNA357022	357022	Proteobacteria	Alphaproteobacteria	3.29571	57.2	-	MRUQ01	41	3384	3136	5/19/17	5/24/17	Contig	LAU	SAMN06131490	GCA_002150445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/445/GCA_002150445.1_ASM215044v1	-	CMUL 035
Enterobacter asburiae	61645	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	4.54695	56	-	NEYO01	24	4419	4249	6/9/17	6/12/17	Contig	JCVI	SAMN06812669	GCA_002185225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/225/GCA_002185225.1_ASM218522v1	-	ARLG-2979
Listeria monocytogenes SLCC2378	879088	PRJEA51729	51729	Terrabacteria group	Firmicutes	2.94136	38	chromosome:NC_018585.1/FR733644.1	-	1	2978	2847	9/10/12	2/26/17	Complete Genome	ERA-NET / Spatelis	SAMEA2272689	GCA_000307615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/615/GCA_000307615.1_ASM30761v1	23339658	SLCC2378
Pseudoalteromonas sp. XI10	1766621	PRJNA305180	305180	Proteobacteria	Gammaproteobacteria	4.53595	41.2	-	LOPY01	64	4154	4024	12/18/15	4/11/17	Contig	"Red Sea Research Center, Saudi Arabia"	SAMN04318431	GCA_001469895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/895/GCA_001469895.1_ASM146989v1	26966209	XI10
Achromobacter xylosoxidans JCM 9787	1295130	PRJDB835	245937	Proteobacteria	Betaproteobacteria	4.61592	65.5	-	BBCZ01	3100	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000548	GCA_001312125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/125/GCA_001312125.1_ASM131212v1	-	JCM 9787
Klebsiella variicola	244366	PRJEB7831	268465	Proteobacteria	Gammaproteobacteria	5.67627	57	-	CEGG01	103	5717	5333	2/18/15	2/21/17	Scaffold	INSTITUTO NACIONAL DE SALUD	SAMEA3140791	GCA_000941635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/635/GCA_000941635.1_8917	-	8917
Streptococcus oralis	1303	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.01964	40.8	-	JUVF01	261	2047	1903	7/10/15	4/3/17	Contig	University of Washington	SAMN03197939	GCA_001074085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/085/GCA_001074085.1_ASM107408v1	26230489	734_SORA
Staphylococcus capitis	29388	PRJEB8618	278837	Terrabacteria group	Firmicutes	2.50835	32.8	-	CTEB01	1	2427	2299	3/25/15	4/3/17	Scaffold	Department of Biosecurity PCL3	SAMEA3271078	GCA_001215085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/085/GCA_001215085.1_CR03	-	CR03
Staphylococcus hominis	1290	PRJEB10524	374818	Terrabacteria group	Firmicutes	2.23684	31.2	-	FBVM01	40	2222	2105	2/12/17	2/23/17	Scaffold	UNIVERSITY OF LIVERPOOL	SAMEA3515758	GCA_900006745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/006/745/GCA_900006745.1_S.hominis_J27	-	-
Lactobacillus paracasei subsp. paracasei Lpp70	1256198	PRJNA178425	178425	Terrabacteria group	Firmicutes	2.72351	46.5	-	ANLF01	474	2978	2498	6/11/13	4/1/17	Contig	Danone Research	SAMN02641493	GCA_000410495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/495/GCA_000410495.1_ASM41049v1	23894338	Lpp70
Gardnerella vaginalis 1500E	698957	PRJNA42447	42447	Terrabacteria group	Actinobacteria	1.54824	43	-	ADES01	27	1249	1167	5/21/12	3/30/17	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393780	GCA_000263595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/595/GCA_000263595.1_ASM26359v1	-	1500E
Listeria monocytogenes 07PF0776	1126011	PRJNA78811	78811	Terrabacteria group	Firmicutes	2.90156	38	chromosome:NC_017728.1/CP003414.1	-	1	2942	2765	4/17/12	2/26/17	Complete Genome	University of Illinois at Chicago	SAMN02604190	GCA_000258905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/905/GCA_000258905.1_ASM25890v1	22689239	07PF0776
Lactobacillus crispatus	47770	PRJNA312549	312549	Terrabacteria group	Firmicutes	1.98828	37	-	LYRE01	81	2034	1828	7/14/17	7/17/17	Scaffold	University of Minnesota	SAMN04498986	GCA_002218885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/885/GCA_002218885.1_ASM221888v1	-	UMNLC14
Pectobacterium carotovorum subsp. brasiliense	180957	PRJNA269211	269211	Proteobacteria	Gammaproteobacteria	4.78008	52.2	-	JUJC01	17	4321	4143	12/29/14	4/2/17	Scaffold	Beijing Academy of Agriculture and Forestry Sciences	SAMN03252594	GCA_000808385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/385/GCA_000808385.1_ASM80838v1	-	YC D52
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.76047	47.6	-	MEAB01	87	3494	3306	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320403	GCA_001883275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/275/GCA_001883275.1_ASM188327v1	-	00/0652-K3
Flavobacterium psychrophilum	96345	PRJEB21067	396411	FCB group	Bacteroidetes/Chlorobi group	2.8449	32.4	-	FYCE01	101	2642	2526	7/29/17	8/7/17	Contig	INRA	SAMEA104125241	GCA_900186455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/455/GCA_900186455.1_FPFI146_V1	-	FI146
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.36728	66.7	-	LOXM01	329	7724	7272	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449268	GCA_001524455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/455/GCA_001524455.1_ASM152445v1	-	MSMB2036
Aeromonas hydrophila	644	PRJNA302469	302469	Proteobacteria	Gammaproteobacteria	4.96999	60.9	-	LRRY01	19	4598	4412	3/31/16	4/5/17	Contig	Mississippi State University	SAMN04274135	GCA_001604905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/905/GCA_001604905.1_ASM160490v1	-	ML09-122
Vibrio sp. UCD-FRSSP16_10	1853257	PRJNA322706	322706	Proteobacteria	Gammaproteobacteria	3.59396	42	-	LZFX01	80	3268	3071	6/23/16	4/13/17	Contig	UC Davis	SAMN05172616	GCA_001675945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/945/GCA_001675945.1_ASM167594v1	-	UCD-FRSSP16_10
Staphylococcus saprophyticus	29385	PRJNA352403	352403	Terrabacteria group	Firmicutes	2.56892	33	-	MPAV01	36	2533	2365	1/5/17	4/6/17	Scaffold	University of Wisconsin-Madison	SAMN05978690	GCA_001937025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/025/GCA_001937025.1_ASM193702v1	-	63
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.22405	36.7	-	LPSG01	10	2351	2205	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305167	GCA_001560555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/555/GCA_001560555.1_NG05B_C06_13	-	NG05B_C06_13
Bifidobacterium breve	1685	PRJDB4597	325619	Terrabacteria group	Actinobacteria	2.34466	59	-	BCXX01	44	2120	1921	6/10/16	4/5/17	Contig	Yakult Central Institute	SAMD00047608	GCA_001685945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/945/GCA_001685945.1_ASM168594v1	27340092	BR-L29
Mycobacterium abscessus subsp. bolletii M18	1162283	PRJNA89593	89593	Terrabacteria group	Actinobacteria	4.88694	64.2	-	AJSC01	34	4910	4787	5/4/12	5/19/17	Contig	"Universiti Malaya, Kuala Lumpur"	SAMN02471409	GCA_000261085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/085/GCA_000261085.1_ASM26108v1	22815444	M18
Moraxella catarrhalis	480	PRJNA297370	297370	Proteobacteria	Gammaproteobacteria	1.93546	41.4	-	LXHK01	46	1808	1652	6/3/16	4/5/17	Contig	Drexel University College of Medicine	SAMN04122800	GCA_001656505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/505/GCA_001656505.1_ASM165650v1	26912404	N4
Lactobacillus salivarius	1624	PRJNA321782	321782	Terrabacteria group	Firmicutes	2.38939	32.7	-	LXYX01	217	2392	2181	9/12/17	9/14/17	Contig	Seoul National University	SAMN05003813	GCA_002289935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/935/GCA_002289935.1_ASM228993v1	-	KLW010
Klebsiella oxytoca	571	PRJNA307050	307050	Proteobacteria	Gammaproteobacteria	5.85274	55.1	-	LQAL01	12	5613	5372	3/21/16	8/12/17	Scaffold	Argonne national Lab	SAMN04370968	GCA_001594375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/375/GCA_001594375.1_ASM159437v1	-	ICU1-2b
Cronobacter sakazakii	28141	PRJNA246467	246467	Proteobacteria	Gammaproteobacteria	4.44461	56.9	-	JNBN01	84	4287	4101	6/4/14	4/3/17	Contig	Health Canada	SAMN02767826	GCA_000698225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/225/GCA_000698225.1_ASM69822v1	25103765	HPB5174
Enterobacter cloacae UCI 36	1400151	PRJNA219286	219286	Proteobacteria	Gammaproteobacteria	4.75623	55.2	-	JCKR01	11	4749	4496	2/3/14	3/24/17	Scaffold	Broad Institute	SAMN02356616	GCA_000534175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/175/GCA_000534175.1_Ente_cloa_UCI_36_V1	-	UCI 36
Proteus mirabilis	584	PRJNA319626	319626	Proteobacteria	Gammaproteobacteria	3.96907	38.9	-	LWUM01	190	3700	3501	6/1/16	4/5/17	Contig	UNIVERSITY OF MALAYA	SAMN04901710	GCA_001653845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/845/GCA_001653845.1_ASM165384v1	-	PM_178
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.50067	32.7	-	CUHA01	76	2452	2342	3/31/15	3/26/17	Contig	SC	SAMEA1035063	GCA_001229785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/785/GCA_001229785.1_7068_7_58	-	112056
Propionibacterium acnes HL005PA2	765097	PRJNA49227	49227	Terrabacteria group	Actinobacteria	2.47318	60.1	-	ADZN01	19	2495	2353	7/29/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189195	GCA_000144385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/385/GCA_000144385.1_ASM14438v1	-	HL005PA2
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.26738	66.7	-	LPCU01	94	5852	5538	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449413	GCA_001530215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/215/GCA_001530215.1_ASM153021v1	-	HI3908
Burkholderia sp. 9120	1500897	PRJNA247916	247916	Proteobacteria	Betaproteobacteria	8.45563	62.7	-	JQNA01	2	7485	7246	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02787046	GCA_000745015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/015/GCA_000745015.1_ASM74501v1	-	9120
Campylobacter coli 2698	887321	PRJNA52779	52779	Proteobacteria	delta/epsilon subdivisions	1.51587	31.3	-	AIMR01	141	1588	1496	3/16/12	3/15/17	Contig	Cornell University	SAMN02429018	GCA_000253595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/595/GCA_000253595.2_ASM25359v2	-	2698
Lactobacillus brevis BSO 464	1334191	PRJNA203088	203088	Terrabacteria group	Firmicutes	2.7232	45.4558	chromosome:CP005977.1; plasmid pL747-1:CP005978.1; plasmid pL747-2:CP005979.1; plasmid pL747-3:CP005980.1; plasmid pL747-4:CP005981.1; plasmid pL747-5:CP005982.1; plasmid pL747-6:CP005983.1; plasmid pL747-7:CP005984.1; plasmid pL747-8:CP005985.1	-	9	2708	2606	12/29/14	12/17/15	Chromosome	University of Saskatchewan	SAMN03273225	GCA_000807975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/975/GCA_000807975.1_ASM80797v1	-	BSO 464
Mannheimia haemolytica	75985	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.66395	41	-	LQCY01	82	2752	2598	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366494	GCA_001929455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/455/GCA_001929455.1_ASM192945v1	-	2125MH
Listeria monocytogenes FSL R2-561	393126	PRJNA17317	17317	Terrabacteria group	Firmicutes	2.9738	38	chromosome:NC_017546.1/CP002003.1	-	1	3044	2897	9/13/11	2/26/17	Complete Genome	Broad Institute	SAMN00013319	GCA_000168575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/575/GCA_000168575.2_ASM16857v2	-	FSL R2-561
Serratia marcescens BIDMC 80	1445864	PRJNA234266	234266	Proteobacteria	Gammaproteobacteria	5.27423	59.7	-	JJNA01	37	5040	4865	4/15/14	3/24/17	Scaffold	Broad Institute	SAMN02581399	GCA_000633715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/715/GCA_000633715.1_Serr_marc_BIDMC_80_V1	-	BIDMC 80
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.18117	39.9	-	FQLL01	26	1071	969	5/10/17	5/24/17	Scaffold	WTSI	SAMEA1094372	GCA_900118835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/835/GCA_900118835.1_7067_6_74	-	09_03
Leuconostoc mesenteroides subsp. cremoris	33965	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.59621	38.1	-	MPLI01	107	1697	1356	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981497	GCA_002092615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/615/GCA_002092615.1_ASM209261v1	28217118	LN07
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.11022	41.5	-	JJPL01	162	3531	3314	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708986	GCA_000979665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/665/GCA_000979665.1_gtlEnvA5udCFS	25756680	3.F.T.2.1
Yersinia enterocolitica	630	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	4.65721	47.2	-	CPYU01	34	4358	4167	3/23/15	3/26/17	Contig	SC	SAMEA1486348	GCA_001135745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/745/GCA_001135745.1_8016_2_62	-	IP26618
Listeria monocytogenes 10403S	393133	PRJNA17495	17495	Terrabacteria group	Firmicutes	2.90311	38	chromosome:NC_017544.1/CP002002.1	-	1	2957	2839	9/7/11	2/26/17	Complete Genome	Broad Institute	SAMN02641382	GCA_000168695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/695/GCA_000168695.2_ASM16869v2	-	10403S
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.47121	53.6	-	MLBN01	37	2438	2211	10/13/16	8/3/17	Contig	Institute for Medical Research	SAMN05877642	GCA_001833035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/035/GCA_001833035.1_ASM183303v1	28254972	c20
Sinorhizobium meliloti H1	1194719	PRJNA167601	167601	Proteobacteria	Alphaproteobacteria	6.92315	62	-	AKZR01	397	7054	5893	8/13/12	5/19/17	Scaffold	University of Florence	SAMN02471761	GCA_000287475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/475/GCA_000287475.1_SMH1_v1	23431003	H1
Bordetella bronchiseptica GA96-01	1331215	PRJNA202127	202127	Proteobacteria	Betaproteobacteria	5.28667	68.3	-	JGXD01	157	5064	4844	5/12/14	4/4/17	Contig	JCVI	SAMN02231542	GCA_000690135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/135/GCA_000690135.2_gbb19v01	25908122	GA96-01
Haemophilus influenzae R2846	262727	PRJNA9620	9620	Proteobacteria	Gammaproteobacteria	1.81937	38	chromosome:NC_017452.1/CP002276.1	-	1	1801	1656	10/25/10	3/22/17	Complete Genome	University of Washington; Seattle Biomedical Research Institute	SAMN02604260	GCA_000165575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/165/575/GCA_000165575.1_ASM16557v1	-	R2846
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31255	57.2358	chromosome 1:NZ_CP018530.1/CP018530.1; chromosome 2:NZ_CP018531.1/CP018531.1	-	2	3370	3140	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932960	GCA_002191515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/515/GCA_002191515.1_ASM219151v1	28388689	BwIM_SYR_34
Lactobacillus rhamnosus	47715	PRJNA265920	265920	Terrabacteria group	Firmicutes	3.04016	46.6	-	JWHC01	72	3103	2844	1/5/15	4/2/17	Contig	Vavilov Institute of General Genetics	SAMN03154069	GCA_000814485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/485/GCA_000814485.1_ASM81448v1	-	308
Pasteurella multocida subsp. multocida	44283	PRJNA244094	244094	Proteobacteria	Gammaproteobacteria	2.3502	40.3	-	JQAC01	32	2239	2156	6/14/15	4/3/17	Contig	Murdoch University	SAMN02721587	GCA_001027805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/805/GCA_001027805.1_ASM102780v1	26151935	Pesh
Listeria monocytogenes 08-5923	637381	PRJNA36363	36363	Terrabacteria group	Firmicutes	2.99905	38	chromosome:NC_013768.1/CP001604.1	-	1	3076	2969	1/20/10	2/26/17	Complete Genome	Public Health Agency of Canada	SAMN02603721	GCA_000022925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/925/GCA_000022925.1_ASM2292v1	20167121	Aug-23
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12462	41.2	-	CWBO01	70	2055	1886	6/23/15	3/26/17	Contig	SC	SAMEA1032781	GCA_001175505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/505/GCA_001175505.1_6903_5_79	-	EQUI0128
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.93293	66.3	-	JVUQ01	265	4622	4467	7/10/15	3/26/17	Contig	University of Washington	SAMN03197278	GCA_001069605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/605/GCA_001069605.1_ASM106960v1	26230489	1305.rep1_SMAL
Bacillus amyloliquefaciens	1390	PRJNA294742	294742	Terrabacteria group	Firmicutes	3.94181	46.4	-	LJDI01	35	3915	3755	9/18/15	4/4/17	Contig	Yangtze University	SAMN04032688	GCA_001294785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/785/GCA_001294785.1_ASM129478v1	-	XK-4-1
Chlamydia psittaci 10_743_SC13	1238236	PRJNA176509	176509	PVC group	Chlamydiae	1.18935	38.3	-	ATNC01	370	1056	975	7/2/13	4/1/17	Scaffold	IGS	SAMN01821746	GCA_000417715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/715/GCA_000417715.1_ASM41771v1	-	10_743_SC13
"Enterococcus faecium 1,230,933"	565656	PRJNA32943	32943	Terrabacteria group	Firmicutes	3.14078	38.4	-	ACAS01	85	3077	2833	6/15/09	3/22/17	Scaffold	Broad Institute	SAMN02595263	GCA_000157435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/435/GCA_000157435.1_ASM15743v1	-	"1,230,933"
Neisseria gonorrhoeae	485	PRJNA236643	236643	Proteobacteria	Betaproteobacteria	2.12748	52.5	-	JPOZ01	141	2465	2063	10/3/14	3/24/17	Contig	Federal Medical and Biological Agency SRI of Physical-Chemical Medicine	SAMN02934149	GCA_000763255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/255/GCA_000763255.1_ASM76325v1	-	NG05
Streptococcus mutans TCI-201	1074153	PRJNA72049	72049	Terrabacteria group	Firmicutes	1.77085	37	-	AGLI01	146	1797	1678	10/6/11	3/22/17	Contig	JCVI	SAMN02436450	GCA_000229345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/345/GCA_000229345.2_SMUT6-NEX_2-201	-	TCI-201
Borrelia garinii IPT117	1408845	PRJNA223339	223339	Spirochaetes	Spirochaetia	0.74815	28	-	AYAU01	576	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378812	GCA_000501795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/795/GCA_000501795.1_BorGarIPT117	-	IPT117
Enterococcus faecalis TX0860	749512	PRJNA47179	47179	Terrabacteria group	Firmicutes	3.06177	37.2	-	AEBX01	72	3128	2998	9/9/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189122	GCA_000148085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/085/GCA_000148085.1_ASM14808v1	-	TX0860
Brucella suis bv. 1 str. S2	1004954	PRJNA65465	65465	Proteobacteria	Alphaproteobacteria	3.28372	57.3	-	AFFC02	28	3316	3107	4/26/11	4/2/17	Contig	"Microbial Genome Research Center, CAS Key laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences"	SAMN02470031	GCA_000209635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/209/635/GCA_000209635.2_ASM20963v2	21602346	S2
Rhizobium leguminosarum bv. trifolii	386	PRJNA325742	325742	Proteobacteria	Alphaproteobacteria	7.54454	60.6	-	MAMO01	179	7427	6888	7/5/16	4/5/17	Contig	Maria Curie-Sklodowska University in Lublin 	SAMN05251099	GCA_001679565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/565/GCA_001679565.1_ASM167956v1	-	Rt24.2
Treponema pallidum subsp. pallidum	161	PRJNA322283	322283	Spirochaetes	Spirochaetia	1.13912	52.8	chromosome:NZ_CP016063.1/CP016063.1	-	1	1064	1002	8/25/16	4/5/17	Chromosome	"National Institute of Health, Portugal"	SAMN05150648	GCA_001713215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/215/GCA_001713215.1_ASM171321v1	-	PT_SIF1242
Borrelia burgdorferi IPT49	1408867	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.05194	28.6	-	AYBQ01	537	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378834	GCA_000501435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/435/GCA_000501435.1_BorBurgIPT49	-	IPT49
Burkholderia multivorans	87883	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	6.64874	67	-	JUSI01	510	6548	5932	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03198014	GCA_001058485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/485/GCA_001058485.1_ASM105848v1	26230489	800_BMUL
Clostridium botulinum	1491	PRJNA290143	290143	Terrabacteria group	Firmicutes	3.04073	27.9	-	LHYR01	103	2927	2792	8/12/15	3/26/17	Scaffold	Anses	SAMN03876601	GCA_001266875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/875/GCA_001266875.1_ASM126687v1	26430029	55741-CD
Haemophilus influenzae PittEE	374930	PRJNA16400	16400	Proteobacteria	Gammaproteobacteria	1.81303	38	chromosome:CP000671.1	-	1	1695	1619	6/7/07	1/30/14	Complete Genome	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02603084	GCA_000016465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/465/GCA_000016465.1_ASM1646v1	-	PittEE
Salinispora arenicola CNT857	1137254	PRJNA169778	169778	Terrabacteria group	Actinobacteria	5.71202	69.5	-	AZWX01	92	5245	4899	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597254	GCA_000514955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/955/GCA_000514955.1_ASM51495v1	-	CNT857
Lactobacillus casei	1582	PRJNA407882	407882	Terrabacteria group	Firmicutes	2.97189	46.8	-	NXEX01	76	3137	2900	10/1/17	10/1/17	Contig	McGill University	SAMN07665577	GCA_002406785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/406/785/GCA_002406785.1_ASM240678v1	-	P3
Coxiella burnetii cb109	1196327	PRJNA167845	167845	Proteobacteria	Gammaproteobacteria	1.95464	42.5	-	AKYP01	257	-	-	9/28/12	1/8/14	Contig	URMITE	SAMN02472052	GCA_000300315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/315/GCA_000300315.1_ASM30031v1	23209205	cb109
Haemophilus influenzae PittGG	374931	PRJNA16401	16401	Proteobacteria	Gammaproteobacteria	1.88719	38	chromosome:CP000672.1	-	1	1741	1667	6/7/07	1/30/14	Complete Genome	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02603085	GCA_000016485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/485/GCA_000016485.1_ASM1648v1	-	PittGG
Vibrio parahaemolyticus AQ3810	419109	PRJNA176638	176638	Proteobacteria	Gammaproteobacteria	5.16718	45.1	-	AZJP01	92	5542	4462	2/27/14	3/18/17	Scaffold	IGS	SAMN01923896	GCA_000582905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/905/GCA_000582905.2_vpAQ3810	-	AQ3810
Aeromonas salmonicida subsp. salmonicida	29491	PRJNA264317	264317	Proteobacteria	Gammaproteobacteria	5.03466	58.1	-	LAIS01	916	5228	4553	4/26/17	4/26/17	Contig	Universite Laval	SAMN03421178	GCA_002110585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/585/GCA_002110585.1_ASM211058v1	27752114	M15879-11
Streptococcus mitis	28037	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.93362	40.4	-	JVJJ01	39	1910	1779	7/10/15	4/3/17	Contig	University of Washington	SAMN03197571	GCA_001070985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/985/GCA_001070985.1_ASM107098v1	26230489	38_SPSE
Oenococcus oeni IOEB_CiNe	1428426	PRJNA229552	229552	Terrabacteria group	Firmicutes	1.79087	37.9	-	AZJV01	60	1845	1616	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02902399	GCA_000761885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/885/GCA_000761885.1_Oeoe_IOEB_CiNe_1.0	24901216	IOEB_CiNe
Xanthomonas oryzae pv. oryzae	64187	PRJNA269405	269405	Proteobacteria	Gammaproteobacteria	4.28985	63.9	-	JXEB01	437	4267	3431	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252504	GCA_001927385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/385/GCA_001927385.1_ASM192738v1	-	BXO554
Campylobacter fetus subsp. venerealis	32020	PRJNA285144	285144	Proteobacteria	delta/epsilon subdivisions	1.97362	33.1	-	LMBI01	77	2048	1929	8/5/16	4/5/17	Contig	Utrecht University	SAMN03740594	GCA_001699535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/535/GCA_001699535.1_ASM169953v1	27333878	WBT011/09
Colwellia psychrerythraea 34H	167879	PRJNA275	275	Proteobacteria	Gammaproteobacteria	5.37318	38	chromosome:NC_003910.7/CP000083.1	-	1	4634	4441	5/16/02	5/18/17	Complete Genome	TIGR	SAMN02604001	GCA_000012325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/325/GCA_000012325.1_ASM1232v1	16043709	34H; BAA-681
Leptospira borgpetersenii serovar Pomona str. 200901868	1192866	PRJNA167255	167255	Spirochaetes	Spirochaetia	4.26763	40.3	-	AKWF02	144	5157	5111	10/17/12	11/19/13	Contig	J. Craig Venter Institute	SAMN01036874	GCA_000306415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/415/GCA_000306415.2_gls454133v02	-	200901868
Lactobacillus delbrueckii subsp. bulgaricus	1585	PRJEB11306	307555	Terrabacteria group	Firmicutes	1.75792	49.8	-	CZPS01	44	1867	1575	1/3/16	4/5/17	Contig	INRA GRIGNON	SAMEA3628664	GCA_001510975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/975/GCA_001510975.1_Lactobacillus_delbrueckii_subsp._bulgaricus_CFL1	-	CFL1
Yersinia pseudotuberculosis	633	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.76612	46.9	-	CPZI01	106	4415	4059	3/22/15	4/3/17	Scaffold	SC	SAMEA859929	GCA_001140625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/625/GCA_001140625.1_5139_1_11	-	R819
Brucella abortus bv. 3 str. Tulya	520451	PRJNA33029	33029	Proteobacteria	Alphaproteobacteria	3.28276	57.2	-	ACBI01	13	3327	3095	1/23/09	3/22/17	Scaffold	Broad Institute	SAMN02595277	GCA_000157715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/715/GCA_000157715.1_ASM15771v1	-	Tulya
Francisella tularensis	263	PRJNA307317	307317	Proteobacteria	Gammaproteobacteria	1.87793	32.3	chromosome:NZ_CP013853.1/CP013853.1	-	1	1917	1652	1/5/17	4/6/17	Chromosome	USAMRIID	SAMN04378279	GCA_001936015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/015/GCA_001936015.1_ASM193601v1	-	Schu4 F. tul Mut-127
Streptococcus salivarius	1304	PRJNA320256	320256	Terrabacteria group	Firmicutes	2.21983	39.8	-	LXOT01	191	2146	1909	4/17/17	4/21/17	Contig	State University of Campinas	SAMN04942659	GCA_002094045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/045/GCA_002094045.1_ASM209404v1	27902365	85-02 s21
Shigella boydii	621	PRJNA293355	293355	Proteobacteria	Gammaproteobacteria	4.7507	50.4	-	LPSZ01	494	5383	4467	12/15/16	3/5/17	Contig	"University of Maryland, School of Medicine"	SAMN04001707	GCA_001906345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/345/GCA_001906345.1_ASM190634v1	-	603233
Clostridioides difficile T10	1215084	PRJEB214	222753	Terrabacteria group	Firmicutes	4.04221	28.5	-	CANB01	460	3737	3601	10/14/13	3/15/17	Scaffold	LPBA	SAMEA3138897	GCA_000530955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/955/GCA_000530955.1_T10	24482682	T10
Vibrio cholerae MO10	345072	PRJNA15666	15666	Proteobacteria	Gammaproteobacteria	4.07964	47.5	-	AAKF03	27	3829	3697	9/13/05	3/22/17	Scaffold	TIGR	SAMN02435880	GCA_000152425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/425/GCA_000152425.1_ASM15242v1	-	MO10
Ralstonia solanacearum	305	PRJNA347357	347357	Proteobacteria	Betaproteobacteria	5.60928	67	-	MOLK01	134	5018	4770	11/14/16	4/5/17	Scaffold	University of Exeter	SAMN05879719	GCA_001876985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/985/GCA_001876985.1_ASM187698v1	-	PSS4
Listeria monocytogenes EGD-e	169963	PRJNA276	276	Terrabacteria group	Firmicutes	2.94453	38	chromosome:NC_003210.1/AL591824.1	-	1	3055	2867	11/8/01	8/28/16	Complete Genome	European Consortium	SAMEA3138329	GCA_000196035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/035/GCA_000196035.1_ASM19603v1	"116,796,691,642,878,000,000,000"	EGD-e
Burkholderia mallei	13373	PRJNA244036	244036	Proteobacteria	Betaproteobacteria	5.44524	68.4	-	JPGI01	2	5901	5316	9/4/15	4/4/17	Scaffold	Los Alamos National Laboratory	SAMN02798126	GCA_001279195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/195/GCA_001279195.1_BGG	26744368	Turkey5
Bacillus pumilus	1408	PRJNA286914	286914	Terrabacteria group	Firmicutes	3.74348	41.4	-	LFIZ01	68	3800	3327	6/23/15	4/22/16	Contig	Thompson Rivers University	SAMN03771707	GCA_001038525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/525/GCA_001038525.1_ASM103852v1	-	SCAL1
Listeria monocytogenes serotype 4b str. F2365	265669	PRJNA85	85	Terrabacteria group	Firmicutes	2.90519	38	chromosome:NC_002973.6/AE017262.2	-	1	2943	2819	8/28/01	2/26/17	Complete Genome	TIGR	SAMN02603980	GCA_000008285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/285/GCA_000008285.1_ASM828v1	15115801	4b F2365
Enterococcus durans	53345	PRJNA397225	397225	Terrabacteria group	Firmicutes	2.98893	37.9905	chromosome:NZ_CP022930.1/CP022930.1; plasmid pEdBDGP3A:NZ_CP022931.1/CP022931.1	-	2	2868	2614	8/30/17	9/1/17	Complete Genome	Lawrence Berkeley National Laboratory	SAMN07510606	GCA_002277935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/935/GCA_002277935.1_ASM227793v1	-	BDGP3
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.80352	66.9	-	MUJN01	7	7397	7052	2/3/17	3/29/17	Contig	University of British Columbia	SAMN05001819	GCA_001984315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/315/GCA_001984315.1_ASM198431v1	-	VC9789
Lactobacillus reuteri	1598	PRJNA342243	342243	Terrabacteria group	Firmicutes	1.97511	38.7	-	MIMP01	143	1950	1794	5/11/17	5/22/17	Contig	Seoul National University	SAMN05751490	GCA_002128745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/745/GCA_002128745.1_ASM212874v1	-	KLR2008
Bacteroides fragilis str. DS-208	1339276	PRJNA206107	206107	FCB group	Bacteroidetes/Chlorobi group	5.0513	43.6	-	JGDE01	271	4590	4192	3/20/14	4/18/17	Contig	IGS	SAMN02314417	GCA_000598505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/505/GCA_000598505.1_ASM59850v1	-	DS-208
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.6691	50.8	-	CXJQ01	401	5255	4480	7/16/15	2/24/17	Contig	SC	SAMEA2004861	GCA_001253275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/275/GCA_001253275.1_8290_4_17	-	95641
Lactobacillus amylovorus GRL1118	695562	PRJNA42079	42079	Terrabacteria group	Firmicutes	1.97709	37.9883	chromosome:NC_017470.1/CP002609.1; plasmid plasmid1:NC_017471.1/CP002610.1; plasmid plasmid2:NC_017472.1/CP002611.1	-	3	2002	1820	3/29/11	4/10/17	Complete Genome	"Helsinki University, Finland"	SAMN02603307	GCA_000194115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/115/GCA_000194115.1_ASM19411v1	21478337	GRL1118
Bacillus licheniformis	1402	PRJNA342748	342748	Terrabacteria group	Firmicutes	4.29949	45.8	-	MIZF01	26	4510	4334	1/9/17	4/6/17	Contig	Agricultural Research Organisation - volcani center - Israel	SAMN05767746	GCA_001939525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/525/GCA_001939525.1_ASM193952v1	-	127160/7
Vibrio vulnificus	672	PRJNA275514	275514	Proteobacteria	Gammaproteobacteria	5.09441	46.6	-	JYGG01	140	4716	4533	3/31/15	4/3/17	Contig	Hankuk University of Foreign Studies	SAMN03349353	GCA_000967055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/055/GCA_000967055.1_ASM96705v1	-	SC9629
Pseudomonas syringae pv. broussonetiae	129136	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.80197	57.9	-	LJPV01	623	5469	4867	10/20/15	4/11/17	Scaffold	University of Toronto	SAMN03976292	GCA_001400715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/715/GCA_001400715.1_PbrICMP13650	-	ICMP13650
Streptococcus suis 11538	1214180	PRJNA171411	171411	Terrabacteria group	Firmicutes	2.16627	40.9	-	ALKS01	39	2157	1997	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02470634	GCA_000440275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/275/GCA_000440275.1_version1	-	11538
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	3.04308	37.9763	chromosome:NZ_CP014250.1/CP014250.1; plasmid pCFSAN010068_01:NZ_CP014251.1/CP014251.1	-	2	3088	2959	2/4/16	3/1/17	Complete Genome	FDA/CFSAN	SAMN02666871	GCA_001548635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/635/GCA_001548635.1_ASM154863v1	-	CFSAN010068
Listeria monocytogenes	1639	PRJNA306211	306211	Terrabacteria group	Firmicutes	3.03922	37.9715	chromosome:NZ_CP013724.1/CP013724.1; plasmid pLmN1546:NZ_CP013725.1/CP013725.1	-	2	3123	2995	12/30/15	3/1/17	Complete Genome	"University of Zurich, Vetsuisse Faculty"	SAMN04348334	GCA_001483445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/483/445/GCA_001483445.1_ASM148344v1	26966206	Lm N1546
Bacillus flexus	86664	PRJNA331023	331023	Terrabacteria group	Firmicutes	4.10424	37.9712	chromosome:NZ_CP016790.1/CP016790.1; plasmid unnamed1:NZ_CP016791.1/CP016791.1; plasmid unnamed2:NZ_CP016792.1/CP016792.1	-	3	4244	3810	3/9/17	3/11/17	Complete Genome	Jiangsu Normal University	SAMN05435900	GCA_002024265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/265/GCA_002024265.1_ASM202426v1	-	KLBMP 4941
Bifidobacterium longum subsp. infantis	1682	PRJEB7117	270920	Terrabacteria group	Actinobacteria	2.79389	59.8	-	CCWP01	60	2655	2409	12/19/14	4/3/17	Contig	CHUV-UNIL	SAMEA2747185	GCA_000825045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/045/GCA_000825045.1_BIC1401111250.V1	-	BIC1401111250
Shigella flexneri 2a	42897	PRJNA278281	278281	Proteobacteria	Gammaproteobacteria	4.59899	50.5	-	LAIB01	428	5153	4347	6/1/15	3/5/17	Contig	U.S. Food and Drug Administration	SAMN03420873	GCA_001017155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/155/GCA_001017155.1_ASM101715v1	25980352	BS1042
Bacillus megaterium QM B1551	545693	PRJNA30165	30165	Terrabacteria group	Firmicutes	5.52319	37.9674	chromosome:NC_014019.1/CP001983.1; plasmid pBM100:NC_010008.2/CP001984.1; plasmid pBM200:NC_010009.2/CP001985.1; plasmid pBM300:NC_010010.2/CP001986.1; plasmid pBM400:NC_004604.2/CP001987.1; plasmid pBM500:NC_014025.1/CP001988.1; plasmid pBM600:NC_014031.1/CP001989.1; plasmid pBM700:NC_014023.1/CP001990.1	-	8	5674	5379	4/8/10	3/30/17	Complete Genome	"Institute for Genome Sciences, University of Maryland School of Medicine"	SAMN02603354	GCA_000025825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/825/GCA_000025825.1_ASM2582v1	21705586	QM B1551
Pseudomonas putida	303	PRJDB2892	248804	Proteobacteria	Gammaproteobacteria	5.87071	61.9	-	BBNC01	91	5440	5281	9/26/14	4/2/17	Contig	National Institute of Technology and Evaluation	SAMD00020208	GCA_000787655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/655/GCA_000787655.1_ASM78765v1	-	YKD221
Xylella fastidiosa subsp. pauca	698414	PRJNA295541	295541	Proteobacteria	Gammaproteobacteria	2.49666	51.9	-	LKDK01	278	2351	2048	12/18/15	4/4/17	Scaffold	INRA	SAMN04075656	GCA_001469345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/345/GCA_001469345.1_XYFPCFBP8072	-	CFBP8072
Leptospira interrogans serovar Grippotyphosa str. UI 08368	1049902	PRJNA74101	74101	Spirochaetes	Spirochaetia	4.87148	35	-	AHNJ02	78	4411	4003	1/24/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436429	GCA_000244135.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/135/GCA_000244135.3_gls454097v02	-	UI 08368
Cyanothece sp. ATCC 51142	43989	PRJNA20319	20319	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.46038	37.967	chromosome circular:NC_010546.1/CP000806.1; chromosome linear:NC_010547.1/CP000807.1; plasmid A:NC_010539.1/CP000808.1; plasmid B:NC_010541.1/CP000809.1; plasmid C:NC_010542.1/CP000810.1; plasmid D:NC_010543.1/CP000811.1	-	6	5075	4942	4/1/08	4/17/17	Complete Genome	Washington University (WashU)	SAMN02604312	GCA_000017845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/845/GCA_000017845.1_ASM1784v1	18812508	ATCC 51142
Listeria monocytogenes	1639	PRJNA355549	355549	Terrabacteria group	Firmicutes	3.11575	37.9654	chromosome:NZ_CP019167.1/CP019167.1; plasmid pLM5578:NZ_CP019168.1/CP019168.1	-	2	3215	3091	1/17/17	3/2/17	Complete Genome	Food and Drug Administration	SAMN02839425	GCA_001952775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/775/GCA_001952775.1_ASM195277v1	-	HPB5622
Listeria monocytogenes 08-5578	653938	PRJNA36361	36361	Terrabacteria group	Firmicutes	3.10968	37.9653	chromosome:NC_013766.2/CP001602.2; plasmid pLM5578:NC_013767.1/CP001603.1	-	2	3203	3092	1/20/10	2/26/17	Complete Genome	Public Health Agency of Canada	SAMN02603776	GCA_000093125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/093/125/GCA_000093125.2_ASM9312v2	20167121	Aug-78
Streptococcus pneumoniae	1313	PRJNA379899	379899	Terrabacteria group	Firmicutes	2.15342	39.6934	chromosome:CP020551.1; plasmid pSpn_Hu15:CP020552.1	-	2	2295	2197	4/3/17	4/3/17	Chromosome	University of Kaiserslautern	SAMN06622698	GCA_002076855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/855/GCA_002076855.1_ASM207685v1	-	Hu15
Listeria monocytogenes	1639	PRJNA355549	355549	Terrabacteria group	Firmicutes	3.08243	37.965	chromosome:NZ_CP019165.1/CP019165.1; plasmid pLM5578:NZ_CP019166.1/CP019166.1	-	2	3170	3046	1/17/17	3/2/17	Complete Genome	Food and Drug Administration	SAMN02867583	GCA_001952755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/755/GCA_001952755.1_ASM195275v1	-	HPB5415
Leuconostoc mesenteroides subsp. mesenteroides	33967	PRJNA355067	355067	Terrabacteria group	Firmicutes	1.94688	37.9649	chromosome:NZ_CP020731.1/CP020731.1; plasmid pLm1:NZ_CP020732.1/CP020732.1; plasmid pLm2:NZ_CP020733.1/CP020733.1; plasmid pLm3:NZ_CP020734.1/CP020734.1	-	4	2025	1742	5/17/17	5/24/17	Complete Genome	Wageningen University & Research	SAMN06061940	GCA_002148235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/235/GCA_002148235.1_ASM214823v1	-	FM06
Haemophilus influenzae	727	PRJNA272685	272685	Proteobacteria	Gammaproteobacteria	1.89621	38.1	-	JXMD01	31	1940	1791	2/9/15	3/25/17	Contig	Novartis Vaccines	SAMN03284977	GCA_000833915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/915/GCA_000833915.1_ASM83391v1	25814593	Hi394
Prochlorococcus marinus str. MIT 1342	1801627	PRJNA311926	311926	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.548	50.3	-	LVHS01	27	2559	2431	4/25/16	4/5/17	Contig	MIT	SAMN04490365	GCA_001632145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/145/GCA_001632145.1_ASM163214v1	-	MIT 1342
Mycobacterium bovis	1765	PRJNA214551	214551	Terrabacteria group	Actinobacteria	4.30894	65.5	-	JQEN01	89	4266	4018	9/8/14	4/2/17	Contig	South American Mycobacterium bovis WGS	SAMN02902635	GCA_000749685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/685/GCA_000749685.1_ASM74968v1	-	09-1193
Mycobacterium avium subsp. paratuberculosis ATCC 19698	1074454	PRJNA71483	71483	Terrabacteria group	Actinobacteria	4.73633	69.3	-	AGAR01	1092	4851	3972	12/29/11	5/19/17	Contig	University of Wisconsin- Madison	SAMN02472018	GCA_000240525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/525/GCA_000240525.2_ASM24052v2	22163226	ATCC 19698
Clostridium perfringens	1502	PRJNA327442	327442	Terrabacteria group	Firmicutes	3.52177	27.9	-	MARQ01	96	3286	3057	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323892	GCA_001949465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/465/GCA_001949465.1_ASM194946v1	28062388	JFP833
Xanthomonas campestris	339	PRJNA283309	283309	Proteobacteria	Gammaproteobacteria	5.1844	65.5	-	LHBP01	232	4538	4201	8/11/15	4/6/17	Contig	FDA	SAMN03897574	GCA_001264355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/355/GCA_001264355.1_CFSAN033082	-	CFSAN033082
Lactococcus lactis subsp. lactis A12	1137134	PRJNA81819	81819	Terrabacteria group	Firmicutes	2.7	35.3	-	CBLU01	42	2698	2411	7/15/13	4/1/17	Contig	LMGM du CNRS	SAMEA3138808	GCA_000442845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/845/GCA_000442845.1_LLA12V1	23872564	A12
Listeria monocytogenes	1639	PRJNA261392	261392	Terrabacteria group	Firmicutes	2.95225	37.961	chromosome:NZ_CP014790.1/CP014790.1; plasmid pl2015TE24968:NZ_CP015985.1/CP015985.1	-	2	3012	2892	3/23/16	3/3/17	Complete Genome	IZSAM	SAMN04452089	GCA_001596775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/775/GCA_001596775.2_ASM159677v2	-	2015TE24968
Staphylococcus epidermidis VCU071	904325	PRJNA53733	53733	Terrabacteria group	Firmicutes	2.39637	32	-	AGUB01	46	2368	2215	12/22/11	3/23/17	Contig	J. Craig Venter Institute	SAMN00116887	GCA_000260295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/295/GCA_000260295.1_ASM26029v1	-	VCU071
Listeria monocytogenes SLCC2372	932920	PRJEA50377	50377	Terrabacteria group	Firmicutes	3.02291	37.9586	chromosome NC_018588.1:NC_018588.1/FR733648.1; plasmid pLM1-2cUG1:NC_018889.1/FR667691.1	-	2	3107	2988	9/10/12	2/26/17	Complete Genome	ERA-NET / Spatelis	SAMEA2272627	GCA_000210815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/815/GCA_000210815.2_ASM21081v2	23339658	SLCC2372
Yersinia pestis 1045	1345710	PRJNA208260	208260	Proteobacteria	Gammaproteobacteria	4.68408	47.6074	chromosome:NZ_CP006794.1/CP006794.1; plasmid pCD:NZ_CP006795.1/CP006795.1; plasmid pMT:NZ_CP006797.1/CP006797.1; plasmid pPCP:NZ_CP006796.1/CP006796.1	-	4	4489	4193	7/30/15	3/26/17	Chromosome	Los Alamos National Laboratory	SAMN03943674	GCA_001188735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/735/GCA_001188735.1_ASM118873v1	26383663	1045
Pseudomonas fluorescens NZ011	564420	PRJNA32035	32035	Proteobacteria	Gammaproteobacteria	6.81443	58.5	-	AJXJ01	973	6051	5678	7/9/12	5/28/17	Contig	The Sainsbury Laboratory	SAMN02471726	GCA_000276585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/585/GCA_000276585.1_ASM27658v1	-	NZ011
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.2433	37.9541	chromosome:NC_021826.1/CP006597.1; plasmid unnamed:NC_022045.1/CP006611.1	-	2	3337	3201	7/16/13	2/26/17	Complete Genome	University of California at Davis	SAMN02203128	GCA_000438685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/685/GCA_000438685.2_ASM43868v2	-	N1-011A
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	3.10812	37.9495	chromosome:NZ_CP011398.1/CP011398.1; plasmid pCFSAN008100:NZ_CP011399.1/CP011399.1	-	2	3204	3079	5/11/15	2/27/17	Complete Genome	FDA/CFSAN	SAMN02689388	GCA_001005925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/925/GCA_001005925.1_ASM100592v1	-	CFSAN008100
Enterococcus faecium Aus0085	1305849	PRJNA193299	193299	Terrabacteria group	Firmicutes	3.23928	37.947	chromosome:NC_021994.1/CP006620.1; plasmid p1:NC_021987.1/CP006621.1; plasmid p2:NC_021995.1/CP006622.1; plasmid p3:NC_021988.1/CP006623.1; plasmid p4:NC_021989.1/CP006624.1; plasmid p5:NC_021996.1/CP006625.1; plasmid p6:NC_021990.1/CP006626.1	-	7	3381	3004	8/6/13	4/10/17	Complete Genome	University Of Melbourne	SAMN02604219	GCA_000444405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/405/GCA_000444405.1_ASM44440v1	24004955	AUS0085
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.00952	37.9425	chromosome:NC_021839.1/CP006598.1; plasmid unnamed:NC_022046.1/CP006612.1	-	2	3079	2955	7/16/13	2/26/17	Complete Genome	University of California at Davis	SAMN02203125	GCA_000438705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/705/GCA_000438705.2_ASM43870v2	-	J1776
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.00952	37.9425	chromosome:NC_021827.1/CP006599.1; plasmid unnamed:NC_022047.1/CP006613.1	-	2	3078	2953	7/16/13	2/26/17	Complete Genome	University of California at Davis	SAMN02203129	GCA_000438725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/725/GCA_000438725.2_ASM43872v2	-	J1817
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.00951	37.9425	chromosome:NC_021840.1/CP006600.1; plasmid unnamed:NC_022051.1/CP006614.1	-	2	3079	2953	7/16/13	2/26/17	Complete Genome	University of California at Davis	SAMN02203130	GCA_000438745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/745/GCA_000438745.2_ASM43874v2	-	J1926
Pseudomonas fluorescens Wood1R	1085031	PRJEA73041	73041	Proteobacteria	Gammaproteobacteria	6.68132	60.8	-	CAFF01	1437	6064	5751	10/11/11	5/19/17	Contig	The Ohio State Univeristy	SAMEA2272645	GCA_000285615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/615/GCA_000285615.1_ASM28561v1	-	WoodR1
Yersinia pestis CA88-4125	412420	PRJNA18241	18241	Proteobacteria	Gammaproteobacteria	4.82539	47.611	plasmid pCD1:NC_009595.1/CP000722.1; plasmid pMT1:NC_009596.1/CP000723.1	ABCD01	10	4626	4420	6/21/07	3/23/17	Scaffold	ERIC	SAMN02403940	GCA_000181455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/181/455/GCA_000181455.2_ASM18145v2	-	CA88-4125
Candidatus Caedibacter acanthamoebae	244581	PRJNA254818	254818	Proteobacteria	Alphaproteobacteria	2.17577	37.9185	chromosome:CP008936.1; plasmid Plasmid_00001:CP008937.1; plasmid Plasmid_00002:CP008938.1; plasmid Plasmid_00003:CP008939.1; plasmid Plasmid_00004:CP008940.1	-	5	1775	1683	8/22/14	8/22/14	Complete Genome	University of Virginia	SAMN02905703	GCA_000743035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/035/GCA_000743035.1_ASM74303v1	-	-
Staphylococcus epidermidis NIH051475	1155130	PRJNA86755	86755	Terrabacteria group	Firmicutes	2.50856	32	-	AKHL01	91	2506	2303	7/9/12	3/23/17	Contig	NIH-NISC	SAMN00993392	GCA_000275965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/965/GCA_000275965.1_ASM27596v1	-	NIH051475
Enterococcus faecium DO	333849	PRJNA30627	30627	Terrabacteria group	Firmicutes	3.05257	37.9158	chromosome:NC_017960.1/CP003583.1; plasmid 1:NC_017961.1/CP003584.1; plasmid 2:NC_017962.1/CP003585.1; plasmid 3:NC_017963.1/CP003586.1	-	4	3209	3114	5/25/12	8/3/16	Complete Genome	Baylor College of Medicine	SAMN00002237	GCA_000174395.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/395/GCA_000174395.2_ASM17439v2	22769602	DO
Lactococcus lactis subsp. cremoris TIFN1	1234871	PRJNA175624	175624	Terrabacteria group	Firmicutes	2.67978	35.5	-	ASXF01	291	2850	2205	8/19/13	4/10/17	Contig	Top Institute Food and Nutrition	SAMN02472109	GCA_000447885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/885/GCA_000447885.1_LLT1.01	23823494	TIFN1
Xanthomonas campestris	339	PRJNA283309	283309	Proteobacteria	Gammaproteobacteria	5.11785	65.6	-	LHBQ01	206	4466	4130	8/11/15	4/4/17	Contig	FDA	SAMN03897575	GCA_001264385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/385/GCA_001264385.1_CFSAN033083	-	CFSAN033083
Clostridium perfringens	1502	PRJNA327443	327443	Terrabacteria group	Firmicutes	3.54914	27.9	-	MARR01	121	3315	3107	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323893	GCA_001949485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/485/GCA_001949485.1_ASM194948v1	28062388	JFP834
Mycobacterium avium subsp. paratuberculosis S5	1247747	PRJNA178307	178307	Terrabacteria group	Actinobacteria	4.79816	69.2	-	ANPD01	178	4612	3839	1/2/13	5/19/17	Contig	"Institute of Microbial Technology(IMTECH), Chandigarh, India"	SAMN02469426	GCA_000330785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/785/GCA_000330785.1_ASM33078v1	23469332	S5
Mycobacterium bovis	1765	PRJNA214551	214551	Terrabacteria group	Actinobacteria	4.32599	65.6	-	JQEM01	72	4261	4025	9/8/14	4/2/17	Contig	South American Mycobacterium bovis WGS	SAMN02902634	GCA_000749725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/725/GCA_000749725.1_ASM74972v1	-	534
Leuconostoc kimchii IMSNU 11154	762051	PRJNA40837	40837	Terrabacteria group	Firmicutes	2.10179	37.9101	chromosome:NC_014136.1/CP001758.1; plasmid LkipL4701:NC_014131.1/CP001753.1; plasmid LkipL4704:NC_014132.1/CP001754.1; plasmid LkipL4719:NC_014133.1/CP001755.1; plasmid LkipL4726:NC_014134.1/CP001756.1; plasmid LkipL48:NC_014135.1/CP001757.1	-	6	2148	2024	5/6/10	4/17/17	Complete Genome	Institute of Microbiology	SAMN02603394	GCA_000092505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/505/GCA_000092505.1_ASM9250v1	20494991	IMSNU 11154
Haemophilus influenzae	727	PRJNA272685	272685	Proteobacteria	Gammaproteobacteria	1.87073	38	-	JXME01	31	1902	1758	2/9/15	3/25/17	Contig	Novartis Vaccines	SAMN03284978	GCA_000833935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/935/GCA_000833935.1_ASM83393v1	25814593	Hi403
Listeria monocytogenes serotype 1/2c str. 10-5025	1196193	PRJNA167906	167906	Terrabacteria group	Firmicutes	2.96752	37.9	chromosome:NZ_CP007194.1/CP007194.1	-	1	3038	2941	6/30/17	7/3/17	Complete Genome	Public Health Agency of Canada	SAMN07124753	GCA_002213745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/745/GCA_002213745.1_ASM221374v1	-	Oct-25
Listeria monocytogenes serotype 1/2c str. 10-5026	1196194	PRJNA167907	167907	Terrabacteria group	Firmicutes	2.9675	37.9	chromosome:NZ_CP007195.1/CP007195.1	-	1	3038	2941	6/30/17	7/3/17	Complete Genome	Public Health Agency of Canada	SAMN07124754	GCA_002213765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/765/GCA_002213765.1_ASM221376v1	-	Oct-26
Streptococcus pneumoniae	1313	PRJDB5486	368847	Terrabacteria group	Firmicutes	2.15894	39.7	chromosome:AP018043.1	-	1	2247	2177	4/28/17	4/28/17	Chromosome	"Department of Infectious Diseases, Keio University School of Medicine"	SAMD00073749	GCA_002358015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/358/015/GCA_002358015.1_ASM235801v1	-	KK0381
Listeria monocytogenes serotype 3c str. 10-5027	1196195	PRJNA167908	167908	Terrabacteria group	Firmicutes	2.96533	37.9	chromosome:NZ_CP007196.1/CP007196.1	-	1	3041	2943	6/30/17	7/3/17	Complete Genome	Public Health Agency of Canada	SAMN07124755	GCA_002213785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/785/GCA_002213785.1_ASM221378v1	-	Oct-27
Listeria monocytogenes serotype 4b str. 02-1103	1196171	PRJNA167884	167884	Terrabacteria group	Firmicutes	2.97911	37.9	chromosome:NZ_CP007459.1/CP007459.1	-	1	3033	2928	6/30/17	7/3/17	Complete Genome	Public Health Agency of Canada	SAMN07124739	GCA_002213885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/885/GCA_002213885.1_ASM221388v1	-	02-1103
Listeria monocytogenes serotype 4b str. 02-1289	1196172	PRJNA167885	167885	Terrabacteria group	Firmicutes	2.97911	37.9	chromosome:NZ_CP007460.1/CP007460.1	-	1	3033	2928	6/30/17	7/3/17	Complete Genome	Public Health Agency of Canada	SAMN07124740	GCA_002213925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/925/GCA_002213925.1_ASM221392v1	-	02-1289
Leptospira interrogans serovar Grippotyphosa str. UI 08434	1049903	PRJNA74103	74103	Spirochaetes	Spirochaetia	4.74138	34.9	-	AHNK02	60	4275	3844	1/24/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436376	GCA_000244155.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/155/GCA_000244155.3_LintUI08434v0.2	-	UI 08434
Xylella fastidiosa	2371	PRJNA295547	295547	Proteobacteria	Gammaproteobacteria	2.58215	51.6	-	LKES01	328	2481	2217	12/18/15	4/4/17	Scaffold	INRA	SAMN04075659	GCA_001469395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/395/GCA_001469395.1_XYFPCFBP8073	-	CFBP8073
Pseudomonas putida	303	PRJNA266268	266268	Proteobacteria	Gammaproteobacteria	5.32094	61.6	-	JTCJ01	1623	5151	4289	12/16/14	4/2/17	Contig	University of Konstanz	SAMN03160600	GCA_000802565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/565/GCA_000802565.1_ASM80256v1	-	SQ1
Listeria monocytogenes serotype 4b str. 02-1792	1196173	PRJNA167886	167886	Terrabacteria group	Firmicutes	2.97911	37.9	chromosome:NZ_CP007461.1/CP007461.1	-	1	3033	2928	6/30/17	7/3/17	Complete Genome	Public Health Agency of Canada	SAMN07124741	GCA_002213945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/945/GCA_002213945.1_ASM221394v1	-	02-1792
Shigella flexneri 2a	42897	PRJNA278281	278281	Proteobacteria	Gammaproteobacteria	4.62884	50.4	-	LAHX01	426	5208	4326	6/1/15	3/5/17	Contig	U.S. Food and Drug Administration	SAMN03418660	GCA_001017165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/165/GCA_001017165.1_ASM101716v1	25980352	BS1023
Bifidobacterium longum subsp. infantis	1682	PRJEB7117	270920	Terrabacteria group	Actinobacteria	2.79157	59.8	-	CCWS01	51	2657	2413	12/19/14	4/2/17	Contig	CHUV-UNIL	SAMEA2747186	GCA_000825065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/065/GCA_000825065.1_BIC1401212621a.V1	-	BIC1401212621a
Fusobacterium nucleatum W1481	1408287	PRJNA222595	222595	Fusobacteria	Fusobacteriia	2.47797	27.7	-	AXUR01	186	2300	1904	10/28/13	4/2/17	Scaffold	University of Malaya	SAMN02471857	GCA_000493815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/815/GCA_000493815.1_FN_W1481	24526626	W1481
Listeria monocytogenes	1639	PRJNA371291	371291	Terrabacteria group	Firmicutes	2.97255	37.9	chromosome:NZ_CP019614.1/CP019614.1	-	1	3074	2954	2/14/17	3/2/17	Complete Genome	Canadian Food Inspection Agency	SAMN06297508	GCA_001998915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/915/GCA_001998915.1_ASM199891v1	-	10-092876-1559 LM1
Listeria monocytogenes	1639	PRJNA371291	371291	Terrabacteria group	Firmicutes	3.07209	37.9	chromosome:NZ_CP019615.1/CP019615.1	-	1	3188	3059	2/14/17	3/3/17	Complete Genome	Canadian Food Inspection Agency	SAMN06297509	GCA_001998945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/945/GCA_001998945.1_ASM199894v1	-	10-092876-0168
Listeria monocytogenes	1639	PRJNA371291	371291	Terrabacteria group	Firmicutes	2.98969	37.9	chromosome:NZ_CP019617.1/CP019617.1	-	1	3076	2949	2/14/17	3/2/17	Complete Genome	Canadian Food Inspection Agency	SAMN06297521	GCA_001999005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/005/GCA_001999005.1_ASM199900v1	-	10-092876-0055 LM4
Streptococcus suis 12814	1214156	PRJNA171413	171413	Terrabacteria group	Firmicutes	2.0675	41.1	-	ALKT01	55	2082	1941	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02470638	GCA_000440295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/295/GCA_000440295.1_version1	-	12814
Pseudomonas syringae pv. cunninghamiae	264454	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.78263	58.2	-	LJQE01	389	5355	4804	10/20/15	4/11/17	Scaffold	University of Toronto	SAMN03976284	GCA_001400795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/795/GCA_001400795.1_PcuICMP11894	-	ICMP11894
Vibrio vulnificus CladeA-yb158	1112911	PRJNA76645	76645	Proteobacteria	Gammaproteobacteria	5.29466	46.7	-	LBNN01	76	4928	4683	5/26/15	4/3/17	Contig	Technion - Israel Institute of Technology	SAMN03571538	GCA_001013325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/013/325/GCA_001013325.1_ASM101332v1	26205875	CladeA-yb158
Bacillus licheniformis	1402	PRJNA342741	342741	Terrabacteria group	Firmicutes	4.127	44.1	-	MIZD01	52	4205	4006	1/9/17	4/6/17	Contig	Agricultural Research Organisation - volcani center - Israel	SAMN05767736	GCA_001939535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/535/GCA_001939535.1_ASM193953v1	-	127185/2
Listeria monocytogenes	1639	PRJNA371291	371291	Terrabacteria group	Firmicutes	2.94091	37.9	chromosome:NZ_CP019623.1/CP019623.1	-	1	2992	2869	2/14/17	3/3/17	Complete Genome	Canadian Food Inspection Agency	SAMN06297603	GCA_001999125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/125/GCA_001999125.1_ASM199912v1	-	10-092876-1763 LM10
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.69743	50.8	-	CXJK01	389	5247	4509	7/16/15	2/24/17	Contig	SC	SAMEA2004855	GCA_001253775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/775/GCA_001253775.1_8289_7_95	-	88371
Bacteroides fragilis str. J-143-4	1339271	PRJNA206102	206102	FCB group	Bacteroidetes/Chlorobi group	5.52139	43.1	-	JGDH01	270	5058	4627	3/20/14	4/18/17	Contig	IGS	SAMN02314403	GCA_000598525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/525/GCA_000598525.1_ASM59852v1	-	J-143-4
Lactobacillus reuteri	1598	PRJNA342243	342243	Terrabacteria group	Firmicutes	1.90745	38.6	-	MIMN01	96	1866	1732	5/11/17	5/22/17	Contig	Seoul National University	SAMN05751488	GCA_002128755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/755/GCA_002128755.1_ASM212875v1	-	KLR2006
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.22889	67	-	MUJO01	9	7706	7390	2/3/17	3/29/17	Contig	University of British Columbia	SAMN05001820	GCA_001984325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/325/GCA_001984325.1_ASM198432v1	-	VC4558
Colwellia sp. PAMC 20917	1816218	PRJNA315484	315484	Proteobacteria	Gammaproteobacteria	4.68331	37.9	chromosome:NZ_CP014944.1/CP014944.1	-	1	4040	3837	10/18/16	4/13/17	Complete Genome	Korea Polar Research Institute	SAMN04562546	GCA_001767295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/295/GCA_001767295.1_ASM176729v1	-	PAMC 20917
[Haemophilus] ducreyi	730	PRJNA318024	318024	Proteobacteria	Gammaproteobacteria	1.58962	37.9	chromosome:NZ_CP015425.1/CP015425.1	-	1	1547	1382	5/19/16	4/5/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04632440	GCA_001647695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/695/GCA_001647695.1_ASM164769v1	-	VAN2
Bacillus pumilus	1408	PRJNA290581	290581	Terrabacteria group	Firmicutes	3.63392	41.7	-	LHCE01	18	-	-	12/17/15	12/17/15	Contig	Federico II University of Naples	SAMN03893210	GCA_001468935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/935/GCA_001468935.1_ASM146893v1	26506360	SF214
Burkholderia mallei	13373	PRJNA244021	244021	Proteobacteria	Betaproteobacteria	5.49164	68.3	-	JOLB01	17	6034	5311	9/4/15	4/10/17	Scaffold	Los Alamos National Laboratory	SAMN02836930	GCA_001279245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/245/GCA_001279245.1_BFO_8	-	Turkey3
[Haemophilus] ducreyi	730	PRJNA318024	318024	Proteobacteria	Gammaproteobacteria	1.62216	37.9	chromosome:NZ_CP015429.1/CP015429.1	-	1	1565	1398	5/19/16	4/5/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04632444	GCA_001647815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/815/GCA_001647815.1_ASM164781v1	-	GHA1
Ralstonia solanacearum	305	PRJNA378704	378704	Proteobacteria	Betaproteobacteria	5.21485	66.8	-	MZNB01	147	4635	4406	3/16/17	3/18/17	Scaffold	NCDC Lugar Center	SAMN06560054	GCA_002029865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/865/GCA_002029865.1_ASM202986v1	-	GEO_99
Vibrio cholerae RC385	345074	PRJNA15668	15668	Proteobacteria	Gammaproteobacteria	4.1947	47.4	-	AAKH03	23	3942	3709	9/13/05	5/19/17	Scaffold	TIGR	SAMN02435834	GCA_000152445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/445/GCA_000152445.1_ASM15244v1	-	RC385
Clostridioides difficile E10	1215061	PRJEB191	222733	Terrabacteria group	Firmicutes	3.83643	28.3	-	CAME01	293	3573	3384	10/14/13	3/15/17	Scaffold	LPBA	SAMEA3138901	GCA_000531165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/165/GCA_000531165.1_E10	24482682	E10
Shigella boydii	621	PRJNA288486	288486	Proteobacteria	Gammaproteobacteria	4.46358	51	-	LPTA01	541	5094	4276	12/15/16	2/26/17	Contig	"University of Maryland, School of Medicine"	SAMN04001706	GCA_001906355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/355/GCA_001906355.1_ASM190635v1	-	603210
Francisella tularensis subsp. holarctica 257	412422	PRJNA18251	18251	Proteobacteria	Gammaproteobacteria	1.88795	32.1	-	AAUD01	21	1971	1473	12/18/06	8/8/17	Scaffold	Broad Institute	SAMN02595214	GCA_000153845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/845/GCA_000153845.1_ASM15384v1	-	257
Brucella abortus bv. 2 str. 86/8/59	520450	PRJNA33031	33031	Proteobacteria	Alphaproteobacteria	3.29491	57.1	-	ACBJ01	21	3357	3097	1/23/09	3/22/17	Scaffold	Broad Institute	SAMN02595278	GCA_000157735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/735/GCA_000157735.1_ASM15773v1	-	86/8/59
Yersinia pseudotuberculosis	633	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.66738	47.4	-	CQDR01	82	4341	4083	3/22/15	4/3/17	Scaffold	SC	SAMEA859917	GCA_001150985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/985/GCA_001150985.1_5139_2_3	-	2888
Lactobacillus delbrueckii subsp. bulgaricus	1585	PRJNA316681	316681	Terrabacteria group	Firmicutes	1.79043	49.9	-	LVWX01	59	1858	1641	4/20/16	4/5/17	Contig	Chr. Hansen A/S	SAMN04589502	GCA_001624905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/624/905/GCA_001624905.1_ASM162490v1	-	Lb1-WT
[Haemophilus] ducreyi	730	PRJNA318024	318024	Proteobacteria	Gammaproteobacteria	1.63424	37.9	chromosome:NZ_CP015430.1/CP015430.1	-	1	1574	1386	5/19/16	4/5/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04632445	GCA_001647835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/835/GCA_001647835.1_ASM164783v1	-	GHA2
Campylobacter fetus subsp. venerealis cfvi02/298	1273269	PRJNA184001	184001	Proteobacteria	delta/epsilon subdivisions	1.90918	33.2	-	LRVK01	233	2043	1718	8/5/16	4/5/17	Contig	Utrecht University	SAMN04445794	GCA_001699555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/555/GCA_001699555.1_ASM169955v1	27333878	cfvi02/298
Xanthomonas oryzae pv. oryzae	64187	PRJNA269394	269394	Proteobacteria	Gammaproteobacteria	4.26224	63.9	-	JXDQ01	408	4276	3413	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252493	GCA_001927395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/395/GCA_001927395.1_ASM192739v1	-	BXO25
Oenococcus oeni S11	1428435	PRJNA229592	229592	Terrabacteria group	Firmicutes	1.83325	38	-	AZJX01	40	1875	1713	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02902401	GCA_000761905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/905/GCA_000761905.1_Oeoe_S11_1.0	24901216	S11
Streptococcus mitis	28037	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.0846	39.7	-	JUQO01	250	2037	1877	7/10/15	4/3/17	Contig	University of Washington	SAMN03198060	GCA_001074635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/635/GCA_001074635.1_ASM107463v1	26230489	850_SMIT
Vibrio parahaemolyticus VP-48	1238204	PRJNA176639	176639	Proteobacteria	Gammaproteobacteria	5.12809	45.3	-	JDFK01	93	4973	4694	3/4/14	3/18/17	Scaffold	IGS	SAMN01933054	GCA_000593285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/285/GCA_000593285.2_vpVP48	-	VP-48
Listeria monocytogenes J1-220	930782	PRJNA60535	60535	Terrabacteria group	Firmicutes	3.03227	37.9	chromosome:NC_021829.2/CP006046.2	-	1	3106	2986	7/16/13	2/28/17	Complete Genome	FDA	SAMN01816124	GCA_000195395.4	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/395/GCA_000195395.4_ASM19539v4	-	J1-220
Lactobacillus casei	1582	PRJNA407882	407882	Terrabacteria group	Firmicutes	2.96763	46.8	-	NXEZ01	77	3139	2896	10/1/17	10/1/17	Contig	McGill University	SAMN07665575	GCA_002406795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/406/795/GCA_002406795.1_ASM240679v1	-	P1
Salinispora arenicola CNQ748	1144929	PRJNA169777	169777	Terrabacteria group	Actinobacteria	5.82137	69.5	-	AZWY01	90	5165	4849	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597255	GCA_000514975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/975/GCA_000514975.1_ASM51497v1	-	CNQ748
Listeria monocytogenes SLCC2540	879089	PRJEA51731	51731	Terrabacteria group	Firmicutes	2.97696	37.9	chromosome:NC_018586.1/FR733645.1	-	1	3004	2884	9/10/12	2/26/17	Complete Genome	ERA-NET / Spatelis	SAMEA2272785	GCA_000306905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/905/GCA_000306905.1_ASM30690v1	23339658	SLCC2540
Clostridium botulinum	1491	PRJNA290143	290143	Terrabacteria group	Firmicutes	3.0773	27.9	-	LHYQ01	134	2948	2836	8/12/15	3/26/17	Scaffold	Anses	SAMN03876600	GCA_001266885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/885/GCA_001266885.1_ASM126688v1	26430029	50867-CD
Burkholderia multivorans	87883	PRJNA386405	386405	Proteobacteria	Betaproteobacteria	6.13006	65.9	-	NGKK01	4192	7918	6911	7/20/17	7/20/17	Contig	DSO National Laboratories	SAMN06946599	GCA_002222845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/222/845/GCA_002222845.1_ASM222284v1	-	DSOPR54
Borrelia burgdorferi IPT69	1408871	PRJNA223339	223339	Spirochaetes	Spirochaetia	0.996849	28.3	-	AYBU01	618	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378838	GCA_000501495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/495/GCA_000501495.1_BorBurgIPT69	-	IPT69
Treponema pallidum subsp. pallidum	161	PRJNA322283	322283	Spirochaetes	Spirochaetia	1.13913	52.8	chromosome:NZ_CP016064.1/CP016064.1	-	1	1066	1003	8/25/16	4/5/17	Chromosome	"National Institute of Health, Portugal"	SAMN05150673	GCA_001713235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/235/GCA_001713235.1_ASM171323v1	-	PT_SIF1252
Rhizobium leguminosarum bv. viciae USDA 2370	754774	PRJNA355901	355901	Proteobacteria	Alphaproteobacteria	7.81101	60.6	-	MRDL01	72	7570	7194	2/28/17	3/2/17	Contig	"Northeast institute of Geography and Agroecology, Chinese Academy of Sciences"	SAMN06094796	GCA_002008365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/008/365/GCA_002008365.1_ASM200836v1	-	USDA 2370
Brucella suis bv. 1 str. BCB025	1210444	PRJNA170702	170702	Proteobacteria	Alphaproteobacteria	3.28655	57.3	-	ALOK02	290	3374	3141	8/20/12	3/30/17	Contig	Beijing Institute of Disease Control and Prevention	SAMN02469342	GCA_000292005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/005/GCA_000292005.2_ASM29200v2	23209218	BCB025
Enterococcus faecalis TX0109	749502	PRJNA47159	47159	Terrabacteria group	Firmicutes	2.9673	37.4	-	AEBY01	78	3029	2884	9/9/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189109	GCA_000148105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/105/GCA_000148105.1_ASM14810v1	-	TX0109
Borrelia garinii IPT126	1408848	PRJNA223339	223339	Spirochaetes	Spirochaetia	0.951627	28.1	-	AYAX01	657	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378815	GCA_000501835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/835/GCA_000501835.1_BorGarIPT126	-	IPT126
Streptococcus mutans TCI-202	1074154	PRJNA72051	72051	Terrabacteria group	Firmicutes	1.82031	37	-	AGLJ01	115	1847	1728	10/6/11	3/22/17	Contig	JCVI	SAMN02436515	GCA_000229365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/365/GCA_000229365.2_SMUT6-NEX_3-202	-	TCI-202
Neisseria gonorrhoeae SK7461	1352528	PRJNA209320	209320	Proteobacteria	Betaproteobacteria	2.12682	52.5	-	ATPH01	467	2523	2119	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02338785	GCA_001025465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/465/GCA_001025465.1_ASM102546v1	-	SK7461
"Enterococcus faecium 1,231,502"	565657	PRJNA32955	32955	Terrabacteria group	Firmicutes	3.08493	38.2	-	ACAX01	61	3049	2867	6/12/09	3/22/17	Scaffold	Broad Institute	SAMN02595268	GCA_000157535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/535/GCA_000157535.1_ASM15753v1	-	"1,231,502"
Chlamydia psittaci 10_881_SC42	1238235	PRJNA176508	176508	PVC group	Chlamydiae	1.0511	36.8	-	ATND01	6	962	913	7/2/13	4/4/17	Scaffold	IGS	SAMN02435924	GCA_000417735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/735/GCA_000417735.2_ASM41773v2	-	10_881_SC42
Bacillus amyloliquefaciens	1390	PRJNA300225	300225	Terrabacteria group	Firmicutes	4.08932	46	-	LMAT01	48	4113	3920	12/18/15	4/4/17	Contig	Jiangxi Normal University	SAMN04217165	GCA_001469685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/685/GCA_001469685.1_ASM146968v1	-	Jxnuwx-1
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.46636	66.9	-	JUQF01	266	4077	3965	7/10/15	3/26/17	Contig	University of Washington	SAMN03198069	GCA_001074685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/685/GCA_001074685.1_ASM107468v1	26230489	860_SMAL
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12723	41.2	-	CWAO01	80	2052	1876	6/24/15	3/26/17	Contig	SC	SAMEA1032782	GCA_001175525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/525/GCA_001175525.1_6903_3_40	-	EQUI0089
Haemophilus parasuis 174	1275972	PRJNA184685	184685	Proteobacteria	Gammaproteobacteria	1.36981	40	-	APCA01	63	1457	1433	8/7/13	1/8/14	Contig	Iowa State University	SAMN02470073	GCA_000444685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/685/GCA_000444685.1_ASM44468v1	24051319	174
Pasteurella multocida subsp. multocida	44283	PRJNA244075	244075	Proteobacteria	Gammaproteobacteria	2.29811	40.4	-	JQAF01	28	2177	2094	6/14/15	4/3/17	Contig	Murdoch University	SAMN02721472	GCA_001027815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/815/GCA_001027815.1_ASM102781v1	26151935	THD
Lactobacillus rhamnosus	47715	PRJNA264249	264249	Terrabacteria group	Firmicutes	2.88931	46.8	-	JYCS01	71	2942	2763	2/24/15	4/3/17	Contig	"Center for Life Sciences, Nazarbayev University"	SAMN03120606	GCA_000932035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/932/035/GCA_000932035.1_ASM93203v1	25977410	CLS17
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31263	57.2358	chromosome 1:NZ_CP018532.1/CP018532.1; chromosome 2:NZ_CP018533.1/CP018533.1	-	2	3373	3147	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932970	GCA_002191535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/535/GCA_002191535.1_ASM219153v1	28388689	BwIM_SYR_41
Listeria monocytogenes J0161	393130	PRJNA17493	17493	Terrabacteria group	Firmicutes	3.00046	37.9	chromosome:NC_017545.1/CP002001.1	-	1	3077	2978	9/7/11	2/26/17	Complete Genome	Broad Institute	SAMN00769971	GCA_000168635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/635/GCA_000168635.2_ASM16863v2	-	J0161
Bordetella bronchiseptica M85/00/2	1331218	PRJNA202130	202130	Proteobacteria	Betaproteobacteria	5.1579	68.2	-	JGXF01	159	4951	4733	5/12/14	4/2/17	Contig	JCVI	SAMN02231461	GCA_000690155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/155/GCA_000690155.1_gbb22v01	"2,562,743,825,908,120"	M85/00/2
Sinorhizobium meliloti C0438LL	1194718	PRJNA167600	167600	Proteobacteria	Alphaproteobacteria	7.06477	62	-	AKZS01	492	7190	6008	8/13/12	5/19/17	Scaffold	University of Florence	SAMN02471759	GCA_000287495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/495/GCA_000287495.1_SMC0438LL_v1	23431003	C0438LL
Corynebacterium diphtheriae	1717	PRJNA341832	341832	Terrabacteria group	Actinobacteria	2.4358	53.6	-	MINX01	54	2396	2196	11/10/16	8/24/17	Contig	National Institute for Communicable Diseases	SAMN05729411	GCA_001875845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/845/GCA_001875845.1_ASM187584v1	28726616	ST378-KZN-2015-45461
Leuconostoc sp. C2	979982	PRJNA67911	67911	Terrabacteria group	Firmicutes	1.87727	37.9	chromosome:NC_015734.1/CP002898.1	-	1	1893	1787	6/30/11	4/17/17	Complete Genome	Chung-Ang University	SAMN02603135	GCA_000219785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/785/GCA_000219785.1_ASM21978v1	21914872	C2
Yersinia enterocolitica	630	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	4.74584	47.1	-	CPZF01	28	4463	4276	3/23/15	3/26/17	Contig	SC	SAMEA1486356	GCA_001146765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/765/GCA_001146765.1_8016_2_63	-	IP27818
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.09568	41.5	-	JJPN01	182	3528	3334	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708962	GCA_000979675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/675/GCA_000979675.1_gtlEnvA5udCFS	25756680	3.H.A.1A.2
Leuconostoc mesenteroides subsp. mesenteroides	33967	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.96519	37.8	-	MPLJ01	106	2084	1777	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981498	GCA_002092625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/625/GCA_002092625.1_ASM209262v1	28217118	LN08
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.16063	39.9	-	FQLK01	16	1043	947	5/10/17	5/24/17	Scaffold	WTSI	SAMEA1094367	GCA_900118855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/855/GCA_900118855.1_7067_6_70	-	11_01
Serratia marcescens	615	PRJNA244355	244355	Proteobacteria	Gammaproteobacteria	5.13165	59.8	-	JOVM01	2	4900	4710	8/25/14	3/24/17	Scaffold	Los Alamos National Laboratory	SAMN02872852	GCA_000743395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/395/GCA_000743395.1_SAS_1	25291774	CDC_813-60
Halothermothrix orenii H 168	373903	PRJNA16377	16377	Terrabacteria group	Firmicutes	2.57815	37.9	chromosome:NC_011899.1/CP001098.1	-	1	2463	2362	1/13/09	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN00623047	GCA_000020485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/485/GCA_000020485.1_ASM2048v1	19145256	H 168; DSM 9562
Mannheimia haemolytica	75985	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.59527	41.1	-	LQDN01	107	2660	2473	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366509	GCA_001929515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/515/GCA_001929515.1_ASM192951v1	-	23209MH
Lactobacillus brevis	1580	PRJNA264952	264952	Terrabacteria group	Firmicutes	2.73529	45.5	-	JXUF01	11	2876	2811	2/6/15	2/6/15	Scaffold	Technische Universitaet Muenchen	SAMN03144671	GCA_000833405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/405/GCA_000833405.1_ASM83340v1	-	TMW 1.313
Campylobacter coli 84-2	887287	PRJNA52711	52711	Proteobacteria	delta/epsilon subdivisions	1.60534	31.4	-	AIMS01	99	1658	1571	3/16/12	3/15/17	Contig	Cornell University	SAMN02428937	GCA_000253615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/615/GCA_000253615.2_ASM25361v2	-	84-2
Burkholderia sp. ABCPW 111	1820025	PRJNA230987	230987	Proteobacteria	Betaproteobacteria	6.70181	67.7	-	JPWT01	142	6330	5779	11/7/14	4/9/17	Contig	Los Alamos National Laboratory	SAMN02953580	GCA_000773065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/065/GCA_000773065.1_BCW_31	25676747	ABCPW 111
Burkholderia vietnamiensis	60552	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.3079	66.8	-	LPCV01	155	6824	6440	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449414	GCA_001541005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/005/GCA_001541005.1_ASM154100v1	-	PC082
Propionibacterium acnes HL086PA1	765093	PRJNA49219	49219	Terrabacteria group	Actinobacteria	2.52431	60.1	-	ADYP01	16	2548	2419	7/30/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189242	GCA_000144425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/425/GCA_000144425.1_ASM14442v1	-	HL086PA1
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.46654	32.7	-	CUCM01	82	2439	2326	3/31/15	3/26/17	Contig	SC	SAMEA1035108	GCA_001229885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/885/GCA_001229885.1_7067_4_29	-	25-57
Proteus mirabilis	584	PRJNA328901	328901	Proteobacteria	Gammaproteobacteria	4.06011	38.5	-	MBTY01	60	3836	3667	11/1/16	4/5/17	Contig	University of Malaya	SAMN05383975	GCA_001858185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/185/GCA_001858185.1_ASM185818v1	-	T1C
Enterobacter cloacae UCI 35	1400150	PRJNA219285	219285	Proteobacteria	Gammaproteobacteria	4.58909	55.2	-	JCKS01	7	4584	4344	2/3/14	4/10/17	Scaffold	Broad Institute	SAMN02356615	GCA_000534195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/195/GCA_000534195.1_Ente_cloa_UCI_35_V1	-	UCI 35
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.4929	56.7	-	JZDO01	128	4382	4148	4/21/15	4/3/17	Contig	FDA/CFSAN	SAMN03371494	GCA_000974965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/965/GCA_000974965.1_ASM97496v1	25999578	NM1240
Klebsiella oxytoca	571	PRJNA344449	344449	Proteobacteria	Gammaproteobacteria	6.26819	55.3	-	MKCU01	62	6194	5828	4/5/17	4/10/17	Scaffold	University of Florence	SAMN05823989	GCA_002080105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/105/GCA_002080105.1_ASM208010v1	-	DSM 29614
Lactobacillus salivarius	1624	PRJNA321782	321782	Terrabacteria group	Firmicutes	2.25857	32.8	-	LXZP01	100	2310	2146	9/12/17	9/14/17	Contig	Seoul National University	SAMN05003795	GCA_002289965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/965/GCA_002289965.1_ASM228996v1	-	KLA005
Moraxella catarrhalis	480	PRJNA341407	341407	Proteobacteria	Gammaproteobacteria	1.87999	41.5	-	MTGF01	20	1736	1642	2/13/17	2/22/17	Contig	California Department of Public Health	SAMN05721781	GCA_001997265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/265/GCA_001997265.1_ASM199726v1	-	CDPH_C53
Mycobacterium abscessus M159	1162285	PRJNA89597	89597	Terrabacteria group	Actinobacteria	4.93586	64.3	-	AJSD01	118	4917	4693	5/4/12	5/19/17	Contig	"Universiti Malaya, Kuala Lumpur"	SAMN02471413	GCA_000261105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/105/GCA_000261105.1_ASM26110v1	23990576	M159
Bifidobacterium breve	1685	PRJNA377846	377846	Terrabacteria group	Actinobacteria	2.33041	58.9	-	MWVR01	25	2050	1860	3/14/17	3/16/17	Contig	"Biosearch, S.A."	SAMN06473336	GCA_002027265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/265/GCA_002027265.1_ASM202726v1	-	CECT7263
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.2206	36.7	-	LPSH01	21	2336	2200	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305168	GCA_001560565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/565/GCA_001560565.1_NG05B_CO5_01	-	NG05B_CO5_01
Staphylococcus saprophyticus	29385	PRJNA352403	352403	Terrabacteria group	Firmicutes	2.65882	33	-	MPAW01	49	2642	2474	1/5/17	4/6/17	Scaffold	University of Wisconsin-Madison	SAMN05978689	GCA_001937035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/035/GCA_001937035.1_ASM193703v1	-	55
Vibrio sp. UCD-FRSSP16_30	1853258	PRJNA322708	322708	Proteobacteria	Gammaproteobacteria	3.60101	41.9	-	LZFW01	84	3272	3077	6/23/16	4/13/17	Contig	UC Davis	SAMN05172617	GCA_001676025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/025/GCA_001676025.1_ASM167602v1	-	UCD-FRSSP16_30
Aeromonas hydrophila	644	PRJNA323709	323709	Proteobacteria	Gammaproteobacteria	5.12318	60.9	-	LYXN01	218	4863	4638	7/13/16	4/5/17	Contig	Universitat de Barcelona	SAMN05187193	GCA_001684445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/684/445/GCA_001684445.1_ASM168444v1	-	AH-1
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.47783	67.2	-	LOXR01	117	6832	6402	1/21/16	6/27/17	Contig	Northern Arizona University	SAMN03449274	GCA_001524545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/545/GCA_001524545.1_ASM152454v1	-	MSMB0827
Flavobacterium psychrophilum	96345	PRJEB21067	396411	FCB group	Bacteroidetes/Chlorobi group	2.53018	32.5	-	FYCU01	183	2310	2227	7/29/17	8/7/17	Contig	INRA	SAMEA104125756	GCA_900186475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/475/GCA_900186475.1_KU060626-4_V1	-	KU 060626-4
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.76956	47.6	-	MEAC01	74	3527	3370	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320404	GCA_001883325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/325/GCA_001883325.1_ASM188332v1	-	00/1445
Pectobacterium carotovorum subsp. carotovorum	555	PRJNA269232	269232	Proteobacteria	Gammaproteobacteria	4.74116	51.9	-	JUJO01	29	4314	4153	12/29/14	4/2/17	Scaffold	Beijing Academy of Agriculture and Forestry Sciences	SAMN03252616	GCA_000808435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/435/GCA_000808435.1_ASM80843v1	-	YC D16
Lactobacillus crispatus	47770	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.02795	36.9	-	LYRF01	81	2090	1862	7/14/17	7/17/17	Scaffold	University of Minnesota	SAMN04498987	GCA_002218895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/895/GCA_002218895.1_ASM221889v1	-	UMNLC15
Aggregatibacter actinomycetemcomitans serotype d str. SA3733	1434261	PRJNA230862	230862	Proteobacteria	Gammaproteobacteria	1.86013	45.8	-	AZTV01	787	1983	1969	3/23/16	3/23/16	Contig	"Bumgarner laboratory, Department of Microbiology, University of Washington"	SAMN04573008	GCA_001596395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/395/GCA_001596395.1_SA3733v1.0	-	SA3733
Gardnerella vaginalis 00703Bmash	698958	PRJNA42449	42449	Terrabacteria group	Actinobacteria	1.56605	42.3	-	ADET01	16	1347	1230	5/21/12	3/30/17	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393781	GCA_000263615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/615/GCA_000263615.1_ASM26361v1	-	00703Bmash
Lactobacillus paracasei COM0101	1226299	PRJDB479	231329	Terrabacteria group	Firmicutes	3.00336	46.3	-	BAGT01	184	3179	2919	8/15/13	4/2/17	Contig	Kyushu University	SAMD00016729	GCA_000508845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/845/GCA_000508845.1_ASM50884v1	24116025	COM0101
Staphylococcus hominis	1290	PRJEB10524	374818	Terrabacteria group	Firmicutes	2.23679	31.2	-	FBVJ01	51	2213	2094	2/12/17	2/23/17	Scaffold	UNIVERSITY OF LIVERPOOL	SAMEA3515756	GCA_900006845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/006/845/GCA_900006845.1_S.hominis_J11	-	-
Staphylococcus capitis	29388	PRJEB8891	284730	Terrabacteria group	Firmicutes	2.34475	33.1	-	CZWI01	320	2415	2295	11/14/15	11/14/15	Contig	Department of Biosecurity PCL3	SAMEA3661572	GCA_001458675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/675/GCA_001458675.1_CR02	-	CR02
Streptococcus oralis	1303	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.88452	41.2	-	JUNW01	60	1833	1750	7/10/15	4/3/17	Contig	University of Washington	SAMN03198130	GCA_001075675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/675/GCA_001075675.1_ASM107567v1	26230489	918_SORA
Acinetobacter genomosp. 13TU str. NCTC 8102	981325	PRJNA62413	62413	Proteobacteria	Gammaproteobacteria	4.11825	38.7	-	AIEJ01	277	-	-	2/21/12	1/8/14	Contig	University of Birmingham	SAMN02471604	GCA_000248315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/315/GCA_000248315.2_ASM24831v2	23259572	NCTC 8102
Klebsiella variicola	244366	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.95269	56.6	-	JUYL01	850	6105	5554	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197855	GCA_001065835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/835/GCA_001065835.1_ASM106583v1	26230489	653_KVAR
Achromobacter xylosoxidans	85698	PRJNA319130	319130	Proteobacteria	Betaproteobacteria	7.91864	67.5	-	LYQM01	2957	7240	6124	8/18/16	8/18/16	Contig	University of Florida	SAMN04961127	GCA_001707535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/535/GCA_001707535.1_ASM170753v1	-	KCJK1728
Pseudoalteromonas sp. PAMC 28425	1840331	PRJDB4787	321406	Proteobacteria	Gammaproteobacteria	4.97258	39.7	-	BDDS01	66	4490	4239	5/11/16	4/12/17	Contig	Korea Polar Research Institute	SAMD00051355	GCA_001653135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/135/GCA_001653135.1_ASM165313v1	-	PAMC 28425
Candidatus Cloacimonas acidaminovorans str. Evry	459349	PRJEA28717	28717	FCB group	Candidatus Cloacimonetes	2.24682	37.9	chromosome:NC_020449.1/CU466930.1	-	1	1840	1727	2/12/08	4/17/17	Complete Genome	Genoscope	SAMEA2272155	GCA_000146065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/146/065/GCA_000146065.1_ASM14606v1	18245282	Evry
Enterobacter asburiae	61645	PRJEB12511	310579	Proteobacteria	Gammaproteobacteria	4.85827	55.7	-	FCNO01	36	4771	4559	1/30/16	4/5/17	Contig	URMITE	SAMEA3855957	GCA_900048055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/055/GCA_900048055.1_Enterobacter_asburiae	-	LH74
Brucella sp. B13-0095	1867845	PRJNA326393	326393	Proteobacteria	Alphaproteobacteria	3.1531	57.1	-	MAIL01	34	3182	2964	9/23/16	4/13/17	Scaffold	USDA Animal Plant Health Inspection Service-National Veterinary Services Laboratories	SAMN05277611	GCA_001742815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/815/GCA_001742815.1_ASM174281v1	-	B13-0095
Pseudomonas amygdali pv. aesculi	251722	PRJNA287460	287460	Proteobacteria	Gammaproteobacteria	6.12964	58.3	-	LILJ01	287	5971	5303	1/25/16	4/4/17	Contig	University of Edinburgh	SAMN03991981	GCA_001538185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/185/GCA_001538185.1_ASM153818v1	27145446	2315
Acinetobacter pittii	48296	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.11765	39	-	LLHQ01	1067	4006	3783	10/27/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145735	GCA_001416065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/065/GCA_001416065.1_ASM141606v1	-	ABBL120
Leptospira santarosai	28183	PRJNA280849	280849	Spirochaetes	Spirochaetia	4.05748	41.9	-	LAZN01	152	4041	3690	5/15/15	4/3/17	Scaffold	Universidade Federal de Pelotas	SAMN03470256	GCA_001008325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/325/GCA_001008325.1_ASM100832v1	26272577	U233
Citrobacter freundii NBRC 12681	1114920	PRJDB10	77955	Proteobacteria	Gammaproteobacteria	4.9027	51.7	-	BBMV01	48	4830	4604	9/25/14	4/2/17	Contig	National Institute of Technology and Evaluation	SAMD00018684	GCA_000759735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/735/GCA_000759735.1_ASM75973v1	-	NBRC 12681
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.01269	54.8	-	LAAS01	88	4988	4753	3/19/15	3/25/17	Contig	JCVI	SAMN03283319	GCA_000956725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/725/GCA_000956725.1_ASM95672v1	-	32595
Vibrio anguillarum	55601	PRJNA349812	349812	Proteobacteria	Gammaproteobacteria	3.85963	44.6	-	MNLD01	197	3524	3259	4/3/17	4/5/17	Contig	University of Copenhagen	SAMN05933173	GCA_002078035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/035/GCA_002078035.1_ASM207803v1	-	HI618
Kingella kingae KK141	1305596	PRJEB1621	194470	Proteobacteria	Betaproteobacteria	1.99288	46.6	-	CBRM01	1	1879	1508	8/27/13	4/10/17	Scaffold	URMITE	SAMEA2272192	GCA_000477335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/335/GCA_000477335.1_G112	-	KK141
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.32186	55	-	LDBQ01	54	5296	5052	5/21/15	4/6/17	Contig	JCVI	SAMN03495953	GCA_001011175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/175/GCA_001011175.1_ASM101117v1	-	GN03019
Aeromonas veronii	654	PRJNA320014	320014	Proteobacteria	Gammaproteobacteria	4.6965	58.4	-	LXJN01	526	4351	3325	7/28/16	7/28/16	Contig	Christian Medical College	SAMN04914378	GCA_001696435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/435/GCA_001696435.1_ASM169643v1	-	VBF557
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98813	64.1	-	FVHD01	24	4956	4803	3/10/17	3/18/17	Contig	SC	SAMEA2068966	GCA_900133415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/415/GCA_900133415.1_10250_1_50	-	390
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.50064	66.7	-	LOWW01	96	7915	7493	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449246	GCA_001524125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/125/GCA_001524125.1_ASM152412v1	-	FL-6-3-10-S1-D0
Streptococcus sobrinus TCI-2	1074094	PRJNA71951	71951	Terrabacteria group	Firmicutes	2.14177	43.4	-	AGHM01	401	2186	1902	10/6/11	3/30/17	Contig	JCVI	SAMN02436625	GCA_000228525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/525/GCA_000228525.2_SMUT3-NEX_3-2	-	TCI-2
Mycobacterium chelonae	1774	PRJNA323571	323571	Terrabacteria group	Actinobacteria	5.45491	64	-	MAFA01	126	5531	5307	3/3/17	3/6/17	Contig	LNCC	SAMN05186781	GCA_002013815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/815/GCA_002013815.1_ASM201381v1	-	D16Q24
Salinispora pacifica CNS-143	1150612	PRJNA84389	84389	Terrabacteria group	Actinobacteria	3.99701	68.8	-	AIIG01	5260	-	-	4/27/12	1/8/14	Contig	Scripps Insitution of Oceanography	SAMN02470895	GCA_000259635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/635/GCA_000259635.2_ASM25963v2	22479523	CNS-143
Elizabethkingia anophelis	1117645	PRJEB5242	244390	FCB group	Bacteroidetes/Chlorobi group	4.03675	35.7	-	CCAB01	213	3673	3568	4/10/14	4/2/17	Scaffold	INSTITUT PASTEUR	SAMEA3139011	GCA_000689455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/455/GCA_000689455.1_E18064v1_PRJEB5242	-	V0378064
Pseudomonas sp. P179	1125698	PRJNA169471	169471	Proteobacteria	Gammaproteobacteria	6.89384	65.6	-	AQFO01	13	6555	6360	4/8/13	4/9/17	Scaffold	Broad Institute	SAMN01779567	GCA_000478485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/485/GCA_000478485.2_Pseu_sp_P179_V1	-	P179
Streptomyces sp. LaPpAH-202	1155716	PRJNA169720	169720	Terrabacteria group	Actinobacteria	7.00484	73.5	-	ARDM01	34	6101	5917	4/19/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02441710	GCA_000373225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/225/GCA_000373225.1_ASM37322v1	-	LaPpAH-202
Paeniclostridium sordellii	1505	PRJEB8159	277683	Terrabacteria group	Firmicutes	3.39359	27.4	-	CDNL01	25	3279	3186	3/13/15	4/4/17	Contig	WTSI	SAMEA1572116	GCA_001373055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/055/GCA_001373055.1_E204	-	E204
Acinetobacter sp. CIP 64.7	1144673	PRJNA183228	183228	Proteobacteria	Gammaproteobacteria	3.65779	42.9	-	APRY01	19	3601	3339	4/16/13	4/10/17	Scaffold	Broad Institute	SAMN01828130	GCA_000369745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/745/GCA_000369745.1_Acin_sp_CIP_64_7_V1	-	CIP 64.7
Flavobacterium sp. CF108	1882758	PRJEB18231	355534	FCB group	Bacteroidetes/Chlorobi group	5.6109	33.6	-	FQWW01	19	4732	4610	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444671	GCA_900129795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/795/GCA_900129795.1_IMG-taxon_2693429823_annotated_assembly	-	CF108
Klebsiella sp. NFIX41	1566156	PRJEB16892	350953	Proteobacteria	Gammaproteobacteria	5.28233	58.1	-	FOBZ01	21	5216	4973	10/29/16	7/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159451	GCA_900109975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/975/GCA_900109975.1_IMG-taxon_2600255305_annotated_assembly	-	NFIX41
Bacillus sp. FJAT-14578	1208600	PRJNA226628	226628	Terrabacteria group	Firmicutes	5.56939	40.9	-	AYSE01	37	5362	5081	12/5/13	4/17/17	Scaffold	Fujian academy of agricultural sciences	SAMN02469795	GCA_000504165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/165/GCA_000504165.1_SOAPdenovo_for_version2.04_of_Bacillus_sp._FJAT-14578_genome	25377706	FJAT-14578
Clostridium sp. 12(A)	1163671	PRJNA196012	196012	Terrabacteria group	Firmicutes	4.60525	42.1	-	JAGI01	3	4268	4121	1/14/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02584946	GCA_000526575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/575/GCA_000526575.1_ASM52657v1	-	12(A)
Sphingomonas sp. PR090111-T3T-6A	685778	PRJNA67959	67959	Proteobacteria	Alphaproteobacteria	3.91096	67.4	-	AORL01	25	3713	3624	4/26/13	4/17/17	Contig	JGI	SAMN00626993	GCA_000383095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/095/GCA_000383095.1_4088801	23563954	PR090111-T3T-6A
Synechococcus sp. 1G10	2025605	PRJNA396543	396543	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.34022	64.6	-	NQKW01	84	3496	3273	8/15/17	8/17/17	Contig	University of Bristol	SAMN07427896	GCA_002252625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/625/GCA_002252625.1_ASM225262v1	-	1G10
Rhodococcus sp. EPR-147	1813676	PRJNA314738	314738	Terrabacteria group	Actinobacteria	5.35236	64.8	-	LVCU01	596	5363	4773	4/14/16	4/12/17	Contig	Zhejiang Wanli University	SAMN04514659	GCA_001647185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/185/GCA_001647185.1_ASM164718v1	-	EPR-147
Enterobacter sp. BIDMC92	1594172	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.88808	55.2	-	LETR01	3	4766	4541	6/19/15	4/10/17	Scaffold	Broad Institute	SAMN03280194	GCA_001030225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/225/GCA_001030225.1_Ente_spec_BIDMC92_V1	-	BIDMC92
Staphylococcus sp. HMSC075A04	1739249	PRJNA299899	299899	Terrabacteria group	Firmicutes	2.4482	32.1	-	LTHU01	70	2412	2318	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477577	GCA_001810435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/435/GCA_001810435.1_ASM181043v1	-	HMSC075A04
Corynebacterium sp. HMSC08C04	1581137	PRJNA269906	269906	Terrabacteria group	Actinobacteria	2.65771	59.1	-	LWNV01	41	2538	2399	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03434243	GCA_001807495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/495/GCA_001807495.1_ASM180749v1	-	HMSC08C04
Arthrobacter sp. Soil782	1736410	PRJNA298127	298127	Terrabacteria group	Actinobacteria	3.42237	63.4	-	LMSO01	14	3266	3157	11/2/15	4/11/17	Scaffold	ETH Zurich	SAMN04155675	GCA_001428435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/435/GCA_001428435.1_Soil782	26633631	Soil782
Bradyrhizobium sp. CCH10-C7	1768760	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	5.59269	60.7	-	LSIN01	366	5487	5116	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299438	GCA_001556255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/255/GCA_001556255.1_ASM155625v1	-	CCH10-C7
Streptococcus sp. HMSC061D01	1739263	PRJNA299913	299913	Terrabacteria group	Firmicutes	2.01848	38.8	-	LTHK01	57	1969	1857	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477598	GCA_001810705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/705/GCA_001810705.1_ASM181070v1	-	HMSC061D01
Mycobacterium sp. UM_Kg1	1545691	PRJNA260995	260995	Terrabacteria group	Actinobacteria	4.51783	68.5	-	JRMK01	414	4309	3939	4/17/15	4/10/17	Contig	Universiti Malaya	SAMN03068179	GCA_000972925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/925/GCA_000972925.1_ASM97292v1	25830768	UM_Kg1
Pantoea sp. UBA4389	1947032	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.32143	57.6	-	DGRL01	15	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457229	GCA_002389975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/975/GCA_002389975.1_ASM238997v1	28894102	-
Prevotella sp. P3-122	2024223	PRJNA396820	396820	FCB group	Bacteroidetes/Chlorobi group	3.9047	48	-	NPJH01	100	3155	2997	8/14/17	8/16/17	Contig	University of Ljubljana	SAMN07431220	GCA_002251365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/365/GCA_002251365.1_ASM225136v1	-	P3-122
Enterococcus sp. HMSC34G12	1608861	PRJNA274513	274513	Terrabacteria group	Firmicutes	2.92127	37.6	-	LTNE01	305	3031	2842	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498859	GCA_001838605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/605/GCA_001838605.1_ASM183860v1	-	HMSC34G12
Methylobacterium sp. Leaf112	1736258	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.69315	69	-	LMNG01	34	4388	4222	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151638	GCA_001423295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/295/GCA_001423295.1_Leaf112	26633631	Leaf112
Nocardioides sp. REDSEA-S28_B4	1811551	PRJNA289734	289734	Terrabacteria group	Actinobacteria	3.90111	71.7	-	LUPH01	313	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534609	GCA_001627295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/295/GCA_001627295.1_ASM162729v1	27377622	-
Acidovorax sp. 24-64-9	1970309	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	3.92419	63.8	-	NCHK01	252	3788	3606	8/16/17	8/16/17	Scaffold	None	SAMN06622270	GCA_002257135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/135/GCA_002257135.1_ASM225713v1	-	-
Psychrobacter sp. UBA3483	1947351	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.07227	43.4	-	DFQS01	73	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452292	GCA_002377905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/905/GCA_002377905.1_ASM237790v1	28894102	-
Paenibacillus sp. JCM 10914	1236974	PRJDB672	231349	Terrabacteria group	Firmicutes	6.11225	48.6	-	BAUO01	95	5639	4614	11/29/13	4/9/17	Contig	The University of Tokyo	SAMD00000412	GCA_000509425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/509/425/GCA_000509425.1_ASM50942v1	24459258	JCM 10914
Ruminococcus sp. Phil11	1929998	PRJNA357304	357304	Terrabacteria group	Firmicutes	3.70794	54.8	-	MSGZ01	46	-	-	1/10/17	1/10/17	Scaffold	University of Queensland	SAMN06140818	GCA_001940925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/925/GCA_001940925.1_ASM194092v1	-	-
Thioalkalivibrio sp. ALE16	1158172	PRJNA182466	182466	Proteobacteria	Gammaproteobacteria	3.14151	66.6	-	ARLQ01	39	3147	2963	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441669	GCA_000381305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/305/GCA_000381305.1_ASM38130v1	-	ALE16
Bacteroides sp. 2_1_56FAA	665938	PRJNA40013	40013	FCB group	Bacteroidetes/Chlorobi group	5.64844	43.5	-	ACWI01	47	4979	4906	6/13/11	1/9/14	Scaffold	Broad Institute	SAMN02463792	GCA_000218345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/345/GCA_000218345.1_Bacteroides_sp_2_1_56FAA_V1	-	2_1_56FAA
Prochlorococcus sp. scB241_526B17	1471437	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.10774	31.3	-	JFKN01	378	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02647043	GCA_000633975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/975/GCA_000633975.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. BCW_6460	1903294	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.74308	30.4	-	MJXI01	42	1806	1669	10/4/16	4/13/17	Scaffold	University of California at Davis	SAMN03360169	GCA_001762705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/705/GCA_001762705.1_ASM176270v1	-	BCW_6460
Neisseria sp. HMSC075C10	1739539	PRJNA300190	300190	Proteobacteria	Betaproteobacteria	2.22766	49.3	-	LTSP01	62	2204	2054	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480456	GCA_001815615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/615/GCA_001815615.1_ASM181561v1	-	HMSC075C10
Rhizobium sp. CF080	1144310	PRJNA83043	83043	Proteobacteria	Alphaproteobacteria	7.04953	61.4	-	AKKC02	16	6751	6556	7/27/12	4/9/17	Contig	Oak Ridge National Lab	SAMN00839618	GCA_000282095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/095/GCA_000282095.2_Rhizobium.strCF080_v2.0	-	CF080
Halomonas sp. HL-48	1479235	PRJNA283228	283228	Proteobacteria	Gammaproteobacteria	3.54753	59.3	-	LJZS01	34	3311	3249	10/14/15	6/23/16	Scaffold	Pacific Northwest National Laboratroy	SAMN03785500	GCA_001314875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/875/GCA_001314875.1_ASM131487v1	26497460	-
Methylophaga sp. UBA4502	1946893	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.13595	44.7	-	DGNC01	53	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455771	GCA_002388745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/745/GCA_002388745.1_ASM238874v1	28894102	-
Chryseobacterium sp. VAUSW3	2010998	PRJNA389953	389953	FCB group	Bacteroidetes/Chlorobi group	2.63313	39.6	-	NIUY01	10	2472	2413	6/22/17	6/24/17	Contig	Institute of Microbial Technology	SAMN07211361	GCA_002205795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/795/GCA_002205795.1_ASM220579v1	-	VAUSW3
Mesorhizobium sp. LSHC416B00	1287289	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.64576	62.5	-	AYVZ01	52	6568	6005	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359681	GCA_000502655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/655/GCA_000502655.1_Mloti_LSHC416B00	-	LSHC416B00
Variovorax sp. JGI 0001013-L10	1279035	PRJNA185347	185347	Proteobacteria	Betaproteobacteria	0.427235	65.6	-	AXXT01	52	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441432	GCA_000485175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/175/GCA_000485175.1_ASM48517v1	-	JGI 0001013-L10
Xanthomonas translucens pv. cerealis	152263	PRJNA326105	326105	Proteobacteria	Gammaproteobacteria	4.42472	67.4	-	MADM01	251	3859	3448	8/18/16	4/5/17	Scaffold	The Connecticut Agricultural Experiment Station	SAMN05258070	GCA_001707115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/115/GCA_001707115.1_XTC_AA	-	NCPPB1943
Microbacterium sp. Ag1	1643443	PRJNA281381	281381	Terrabacteria group	Actinobacteria	3.87974	68.2	-	LBCR01	34	3820	3721	5/8/15	4/10/17	Contig	New Mexico State University	SAMN03487394	GCA_001005635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/635/GCA_001005635.1_ASM100563v1	-	Ag1
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.78703	58.8	-	LNXL01	65	4592	4450	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339876	GCA_001681975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/975/GCA_001681975.1_ASM168197v1	-	S3585
Sphingopyxis sp. REDSEA-S29_B3	1811570	PRJNA289734	289734	Proteobacteria	Alphaproteobacteria	3.46355	65.2	-	LURE01	43	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534659	GCA_001628115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/115/GCA_001628115.1_ASM162811v1	27377622	-
Bacillus velezensis	492670	PRJNA291327	291327	Terrabacteria group	Firmicutes	4.01448	46.4	-	LHCG01	4	3973	3788	6/2/17	6/16/17	Scaffold	Chinese Academy of Agricultural Sciences	SAMN03951123	GCA_002165455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/455/GCA_002165455.1_ASM216545v1	-	GB1
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.67093	35.1	-	LYST01	59	2440	2329	7/26/16	4/10/17	Contig	University of Texas at Austin	SAMN05179580	GCA_001693755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/755/GCA_001693755.1_ASM169375v1	-	wkB171
Klebsiella michiganensis	1134687	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.24847	55.6	-	JWBC01	164	6200	5885	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197110	GCA_001052825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/825/GCA_001052825.1_ASM105282v1	26230489	1154_KOXY
Achromobacter sp. 2789STDY5663447	1806485	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	6.37226	67.7	-	CYUA01	31	5777	5649	9/19/15	4/11/17	Scaffold	SC	SAMEA2258938	GCA_001299215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/215/GCA_001299215.1_11861_6_72	-	2789STDY5663447
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.38627	51.1	-	MPQU01	76	2345	2244	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016267	GCA_002020715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/715/GCA_002020715.1_ASM202071v1	-	-
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.80487	32.3	-	FQMA01	14	2811	2638	11/24/16	4/10/17	Contig	SC	SAMEA3449123	GCA_900126915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/915/GCA_900126915.1_17175_3_67	-	3688STDY6125121
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.72483	57.1	-	NQCU01	70	5813	5511	8/11/17	8/15/17	Contig	JCVI	SAMN07450606	GCA_002248055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/055/GCA_002248055.1_ASM224805v1	-	KPCTRSRTH03
Fibrobacter sp. UBA4297	1946536	PRJNA348753	348753	FCB group	Fibrobacteres	3.71972	48	-	DGUZ01	26	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452659	GCA_002394865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/865/GCA_002394865.1_ASM239486v1	28894102	-
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.87197	67.5	-	LPKQ01	110	7075	6704	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449623	GCA_001533235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/235/GCA_001533235.1_ASM153323v1	-	MSMB657WGS
Xanthomonas axonopodis pv. manihotis str. ORST4	1185703	PRJNA163801	163801	Proteobacteria	Gammaproteobacteria	4.65021	65	-	AKEI01	767	4479	3622	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090339	GCA_000266305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/305/GCA_000266305.1_ORST4	22699502	ORST4
Candidatus Microthrix sp. UBA3507	1946182	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.02094	62.6	-	DFPU01	230	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450561	GCA_002377425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/425/GCA_002377425.1_ASM237742v1	28894102	-
Catabacter sp. UBA4379	1946268	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.98514	58.7	-	DGRV01	105	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451335	GCA_002391225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/225/GCA_002391225.1_ASM239122v1	28894102	-
Catabacter sp. UBA3859	1946262	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.56521	49.1	-	DGHB01	14	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452536	GCA_002392465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/465/GCA_002392465.1_ASM239246v1	28894102	-
Candidatus Microthrix sp. UBA3506	1946181	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.26146	66.8	-	DFPV01	150	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450562	GCA_002377455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/455/GCA_002377455.1_ASM237745v1	28894102	-
Xanthomonas axonopodis pv. manihotis str. ORST X27	1185704	PRJNA163803	163803	Proteobacteria	Gammaproteobacteria	4.93191	65.1	-	AKEJ01	133	4380	4078	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090340	GCA_000266325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/325/GCA_000266325.1_ORSTX27	22699502	ORST X27
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.57286	67.7	-	LPIZ01	98	6857	6509	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449577	GCA_001533335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/335/GCA_001533335.1_ASM153333v1	-	MSMB2171WGS
Fibrobacter sp. UBA4291	1946535	PRJNA348753	348753	FCB group	Fibrobacteres	2.04921	48.7	-	DGVF01	242	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452661	GCA_002394875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/875/GCA_002394875.1_ASM239487v1	28894102	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.80883	57.1	-	NQCV01	148	5864	5488	8/11/17	8/15/17	Contig	JCVI	SAMN07450605	GCA_002248085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/085/GCA_002248085.1_ASM224808v1	-	KPCTRSRTH04
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.74452	32.3	-	FQMH01	19	2715	2527	11/24/16	4/5/17	Contig	SC	SAMEA3449129	GCA_900126955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/955/GCA_900126955.1_17175_3_73	-	3688STDY6125127
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.60593	51	-	MPRI01	68	2580	2476	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016282	GCA_002020795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/795/GCA_002020795.1_ASM202079v1	-	-
Achromobacter sp. 2789STDY5608609	1806482	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	6.79087	67.4	-	CYTP01	30	6274	6041	9/19/15	4/11/17	Scaffold	SC	SAMEA2247574	GCA_001299235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/235/GCA_001299235.1_11861_6_4	-	2789STDY5608609
Klebsiella michiganensis	1134687	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.18792	55.6	-	JWFG01	351	6135	5809	7/10/15	2/25/17	Scaffold	University of Washington	SAMN03197002	GCA_001053665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/665/GCA_001053665.1_ASM105366v1	26230489	1037_KOXY
Gilliamella apicola	1196095	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	3.06436	33.6	-	NAHR01	129	2756	2645	4/13/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603503	GCA_002088795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/795/GCA_002088795.1_ASM208879v1	-	NO6
Bacillus velezensis M27	1177186	PRJNA159609	159609	Terrabacteria group	Firmicutes	3.86096	46.6	-	AMPK01	21	3819	3679	9/27/12	4/10/17	Contig	"National Academy of Agricultural Science, RDA"	SAMN02470577	GCA_000299615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/615/GCA_000299615.1_ASM29961v1	23209201	M27
Sphingopyxis sp. REDSEA-S38_B16	1811572	PRJNA289734	289734	Proteobacteria	Alphaproteobacteria	2.13778	64.8	-	LURG01	337	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534661	GCA_001628175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/175/GCA_001628175.1_ASM162817v1	27377622	-
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.78736	58.8	-	LNXM01	67	4592	4448	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339877	GCA_001681995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/995/GCA_001681995.1_ASM168199v1	-	S3899
Microbacterium sp. 3J1	861269	PRJEB8445	285632	Terrabacteria group	Actinobacteria	3.40031	69.1	-	CDWI01	30	3266	3180	6/1/15	8/2/17	Contig	University of Granada	SAMEA3249318	GCA_001049495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/495/GCA_001049495.1_Microbacterium_sp._3J1	-	3J1
Xanthomonas translucens pv. translucens	134875	PRJNA326107	326107	Proteobacteria	Gammaproteobacteria	4.52759	67.9	-	MADQ01	705	4081	3516	8/18/16	4/5/17	Scaffold	The Connecticut Agricultural Experiment Station	SAMN05258384	GCA_001707125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/125/GCA_001707125.1_XTR_AA	-	SIMT-07
Variovorax sp. RA8	662548	PRJDB852	245941	Proteobacteria	Betaproteobacteria	5.35531	65	-	BBDP01	2999	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000535	GCA_001312365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/365/GCA_001312365.1_ASM131236v1	-	JCM 16519
Mesorhizobium sp. LSHC424B00	1287296	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.65013	62.5	-	AYVW01	56	6571	6027	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359684	GCA_000502675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/675/GCA_000502675.1_Mloti_LSHC424B00	-	LSHC424B00
Chryseobacterium sp. G972	1805473	PRJEB13113	315740	FCB group	Bacteroidetes/Chlorobi group	5.39004	35.5	-	FJVD01	8	4853	4727	3/23/16	4/12/17	Contig	URMITE	SAMEA3904576	GCA_900078205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/205/GCA_900078205.1_PRJEB13113	-	G972
Halomonas sp. SUBG004	1485007	PRJNA243841	243841	Proteobacteria	Gammaproteobacteria	4.89736	57.4	-	JPEU01	1982	4249	2029	7/28/14	12/23/15	Contig	SaurashtraUniversity	SAMN02720835	GCA_000735265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/265/GCA_000735265.1_ASM73526v1	26697321	SUBG004
Rhizobium sp. CCGE 510	1132836	PRJNA63217	63217	Proteobacteria	Alphaproteobacteria	6.91661	60.8	-	AEYF01	142	6687	6285	8/21/12	5/19/17	Contig	Universidad Nacional Autonoma de Mex	SAMN02469421	GCA_000292525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/525/GCA_000292525.1_ASM29252v1	23105056	CCGE 510
Neisseria sp. HMSC065D04	1739542	PRJNA300193	300193	Proteobacteria	Betaproteobacteria	2.74129	51	-	LTSM01	116	2739	2532	10/17/16	8/4/17	Scaffold	The Genome Institute at Washington University	SAMN04480457	GCA_001815675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/675/GCA_001815675.1_ASM181567v1	-	HMSC065D04
Campylobacter sp. BCW_6461	1903295	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.72427	30.6	-	MJXJ01	28	1821	1674	10/4/16	4/13/17	Scaffold	University of California at Davis	SAMN03360170	GCA_001762735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/735/GCA_001762735.1_ASM176273v1	-	BCW_6461
Prochlorococcus sp. scB241_526K3	1471441	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.13345	31.2	-	JFKR01	523	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671312	GCA_000633995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/995/GCA_000633995.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Bacteroides sp. CAG:598	1262743	PRJEB951	206850	FCB group	Bacteroidetes/Chlorobi group	3.34603	49	-	CAWS01	97	2813	2777	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138440	GCA_000431055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/055/GCA_000431055.1_MGS598	-	-
Thioalkalivibrio sp. AL21	1158152	PRJNA182467	182467	Proteobacteria	Gammaproteobacteria	2.96625	65.4	-	ARLR01	5	2952	2814	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441654	GCA_000381325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/325/GCA_000381325.1_ASM38132v1	-	AL21
Ruminococcus sp. Phil15	1930000	PRJNA357304	357304	Terrabacteria group	Firmicutes	2.07967	44.7	-	MSHC01	50	-	-	1/10/17	1/10/17	Scaffold	University of Queensland	SAMN06140822	GCA_001940995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/995/GCA_001940995.1_ASM194099v1	-	-
Paenibacillus sp. FSL R5-192	1226754	PRJNA173781	173781	Terrabacteria group	Firmicutes	7.08307	45.8	-	ASPR01	80	6221	6053	1/13/14	4/17/17	Contig	Cornell University	SAMN02597346	GCA_000517845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/845/GCA_000517845.1_ASM51784v1	24422886	FSL R5-192
Psychrobacter sp. UBA3480	1947350	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.49181	42.5	-	DFQV01	33	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452289	GCA_002377945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/945/GCA_002377945.1_ASM237794v1	28894102	-
Acidovorax sp. 28-64-14	1970310	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	3.86841	63.6	-	NCGE01	250	3727	3492	8/16/17	8/16/17	Scaffold	None	SAMN06622302	GCA_002278845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/845/GCA_002278845.1_ASM227884v1	-	-
Marinobacter sp. UBA3604	1946819	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.14902	57.3	-	DFMB01	63	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452016	GCA_002375325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/325/GCA_002375325.1_ASM237532v1	28894102	-
Nocardioides sp. REDSEA-S40_B4	1811559	PRJNA289734	289734	Terrabacteria group	Actinobacteria	3.70013	71.9	-	LUPP01	116	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534617	GCA_001627315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/315/GCA_001627315.1_ASM162731v1	27377622	-
Methylobacterium sp. Leaf113	1736259	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	5.1519	67.9	-	LMNJ01	54	4726	4514	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151639	GCA_001423325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/325/GCA_001423325.1_Leaf113	26633631	Leaf113
Enterococcus sp. C1	1182762	PRJNA162851	162851	Terrabacteria group	Firmicutes	3.64493	42.5	-	AKKS01	36	3477	3371	7/10/12	4/7/17	Contig	Universiti Teknologi Malaysia	SAMN02471425	GCA_000277605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/605/GCA_000277605.1_ASM27760v1	23012290	C1
Prevotella sp. P5-108	2024225	PRJNA396820	396820	FCB group	Bacteroidetes/Chlorobi group	2.91543	52.2	-	NPJJ01	63	2504	2384	8/14/17	8/16/17	Contig	University of Ljubljana	SAMN07431218	GCA_002251385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/385/GCA_002251385.1_ASM225138v1	-	P5-108
Pantoea sp. UBA3896	1947031	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.91481	54.8	-	DGFQ01	10	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453100	GCA_002391745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/745/GCA_002391745.1_ASM239174v1	28894102	-
Mycobacterium sp. UM_NZ2	1545694	PRJNA260998	260998	Terrabacteria group	Actinobacteria	5.06738	67.4	-	JRMN01	442	4877	4475	4/17/15	4/10/17	Contig	Universiti Malaya	SAMN03068182	GCA_000972935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/935/GCA_000972935.1_ASM97293v1	25830768	UM_NZ2
Streptococcus sp. HMSC057E02	1739265	PRJNA299915	299915	Terrabacteria group	Firmicutes	1.95863	38.6	-	LTHI01	71	1907	1785	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477579	GCA_001810745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/745/GCA_001810745.1_ASM181074v1	-	HMSC057E02
Bradyrhizobium sp. CCH1-B1	1768766	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	4.29941	67.8	-	LSIY01	243	4189	3992	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299449	GCA_001556485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/485/GCA_001556485.1_ASM155648v1	-	CCH1-B1
Arthrobacter sp. NIO-1057	993071	PRJNA302101	302101	Terrabacteria group	Actinobacteria	3.54182	56.1	-	LNQJ01	13	3320	3194	12/4/15	4/11/17	Scaffold	CSIR-National Chemical Laboratory	SAMN04263917	GCA_001456945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/945/GCA_001456945.1_ASM145694v1	-	NIO-1057
Corynebacterium sp. HMSC08D02	1581138	PRJNA269907	269907	Terrabacteria group	Actinobacteria	2.41874	60.7	-	LWNU01	30	2260	2165	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03434244	GCA_001807505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/505/GCA_001807505.1_ASM180750v1	-	HMSC08D02
Staphylococcus sp. HMSC072H01	1739259	PRJNA299909	299909	Terrabacteria group	Firmicutes	2.47203	31.9	-	LTHN01	78	2410	2291	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477572	GCA_001810625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/625/GCA_001810625.1_ASM181062v1	-	HMSC072H01
Enterobacter sp. BWH52	1686386	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.78885	55.3	-	LETB01	8	4642	4430	6/19/15	4/10/17	Scaffold	Broad Institute	SAMN03280177	GCA_001037565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/565/GCA_001037565.1_Ente_cloa_complex_BWH52_V1	-	BWH52
Rhodococcus sp. EPR-157	1813677	PRJNA314738	314738	Terrabacteria group	Actinobacteria	5.93797	63.5	-	LVCV01	695	5840	5203	4/14/16	4/12/17	Contig	Zhejiang Wanli University	SAMN04514660	GCA_001647195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/195/GCA_001647195.1_ASM164719v1	-	EPR-157
Synechococcus sp. MW101C3	210768	PRJNA396543	396543	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.02914	66.1	-	NQKX01	18	2952	2814	8/15/17	8/17/17	Contig	University of Bristol	SAMN07427897	GCA_002252635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/635/GCA_002252635.1_ASM225263v1	-	MW101C3
Sphingomonas sp. YL-JM2C	1336744	PRJNA205081	205081	Proteobacteria	Alphaproteobacteria	5.92302	67.9	-	ASTM01	273	5541	5276	7/23/13	4/8/17	Contig	Institute of Urban Environment	SAMN02470045	GCA_000439355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/355/GCA_000439355.1_Sphingobium_sp._strain_YL-JM2C	26044437	YL-JM2C
Clostridium sp. ASBs410	1304866	PRJNA195881	195881	Terrabacteria group	Firmicutes	5.72367	43.4	-	JFBV01	1	5345	5162	3/3/14	5/18/17	Contig	DOE Joint Genome Institute	SAMN02849403	GCA_000585315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/315/GCA_000585315.1_ASM58531v1	-	ASBs410
Bacillus sp. 278922_107	1292019	PRJNA188915	188915	Terrabacteria group	Firmicutes	5.10845	38.1	-	AZVI01	40	5227	5049	1/3/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02597213	GCA_000514135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/135/GCA_000514135.1_ASM51413v1	-	278922_107
Klebsiella sp. NFIX13	1566180	PRJEB16931	351096	Proteobacteria	Gammaproteobacteria	5.28274	58.1	-	FODI01	20	5220	4979	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159501	GCA_900110325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/325/GCA_900110325.1_IMG-taxon_2602042106_annotated_assembly	-	NFIX13
Flavobacterium sp. ov086	1761785	PRJEB21387	391617	FCB group	Bacteroidetes/Chlorobi group	6.21781	33.4	-	FZNL01	60	5314	5138	7/13/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487979	GCA_900187965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/965/GCA_900187965.1_IMG-taxon_2609459741_annotated_assembly	-	OV086
Acinetobacter sp. NIPH 1859	1217695	PRJNA183227	183227	Proteobacteria	Gammaproteobacteria	4.2233	41.5	-	APRZ01	8	4019	3811	4/16/13	5/18/17	Scaffold	Broad Institute	SAMN01087859	GCA_000369765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/765/GCA_000369765.1_Acin_sp_NIPH_1859_V1	-	NIPH 1859
Paeniclostridium sordellii	1505	PRJEB8125	277650	Terrabacteria group	Firmicutes	3.69179	27.3	-	CEMY01	40	3650	3516	3/10/15	4/4/17	Scaffold	WTSI	SAMEA1572091	GCA_001372395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/395/GCA_001372395.1_R29426	-	R29426
Streptomyces sp. CcalMP-8W	1155715	PRJNA169725	169725	Terrabacteria group	Actinobacteria	7.80544	72.5	-	ARDQ01	36	6636	6342	4/19/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02441713	GCA_000373305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/305/GCA_000373305.1_ASM37330v1	-	CcalMP-8W
Pseudomonas sp. HPB0071	1203578	PRJNA169470	169470	Proteobacteria	Gammaproteobacteria	5.70102	55.1	-	AQFP01	9	5266	5061	4/8/13	4/17/17	Scaffold	Broad Institute	SAMN01779564	GCA_000478505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/505/GCA_000478505.2_Pseu_sp_HPB0071_V1	-	HPB0071
Elizabethkingia anophelis PW2806	1358028	PRJEB5024	272791	FCB group	Bacteroidetes/Chlorobi group	3.91281	35.9	-	CBYD01	42	3613	3452	1/15/15	4/3/17	Scaffold	HKU	SAMEA3158465	GCA_000982575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/575/GCA_000982575.1_PW2806	-	-
Salinispora pacifica CNT-133	1149864	PRJNA84271	84271	Terrabacteria group	Actinobacteria	4.37819	68.8	-	AIIH01	5224	-	-	4/27/12	1/8/14	Contig	Scripps Insitution of Oceanography	SAMN02470893	GCA_000259655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/655/GCA_000259655.2_ASM25965v2	22479523	CNT-133
Leclercia adecarboxylata	83655	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.77403	54.8	-	DFVL01	208	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451756	GCA_002380575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/575/GCA_002380575.1_ASM238057v1	28894102	-
Mycobacterium chelonae	1774	PRJNA323571	323571	Terrabacteria group	Actinobacteria	5.12253	64.1	-	MAFK01	41	5115	4951	3/3/17	3/6/17	Contig	LNCC	SAMN05186791	GCA_002013825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/825/GCA_002013825.1_ASM201382v1	-	D16R14
Streptococcus sobrinus TCI-118	1074117	PRJNA71985	71985	Terrabacteria group	Firmicutes	2.10723	43.5	-	AGHN01	224	2057	1894	10/6/11	3/30/17	Contig	JCVI	SAMN02436543	GCA_000228545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/545/GCA_000228545.2_SMUT4-NEX_6-118	-	TCI-118
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.14461	67.1	-	LOXZ01	54	7487	7124	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449282	GCA_001524665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/665/GCA_001524665.1_ASM152466v1	-	MSMB0859
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98798	64.1	-	FVIJ01	19	4948	4804	3/10/17	3/18/17	Contig	SC	SAMEA2068971	GCA_900133925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/925/GCA_900133925.1_10250_1_65	-	405
Aeromonas veronii	654	PRJDB5119	339820	Proteobacteria	Gammaproteobacteria	4.56486	58.7	-	BDGY01	80	-	-	8/25/16	5/16/17	Contig	University of Peradeniya	SAMD00057823	GCA_001748325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/325/GCA_001748325.1_ASM174832v1	27942459	Ae52
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.28615	55	-	LDBB01	48	5237	4996	5/21/15	4/6/17	Contig	JCVI	SAMN03495937	GCA_001011185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/185/GCA_001011185.1_ASM101118v1	-	GN02173
Kingella kingae KK88	1305591	PRJEB1614	194474	Proteobacteria	Betaproteobacteria	1.99309	46.6	-	CBRH01	1	1923	1560	8/27/13	4/2/17	Scaffold	URMITE	SAMEA2272459	GCA_000477355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/355/GCA_000477355.1_G101	-	KK88
Vibrio anguillarum RV22	989499	PRJNA63209	63209	Proteobacteria	Gammaproteobacteria	4.01274	44.4	-	AEZB01	296	-	-	6/22/11	1/8/14	Contig	Oregon Health Sciences University	SAMN02470771	GCA_000257185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/185/GCA_000257185.1_ASM25718v1	21576332	RV22
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.05066	55.1	-	LAAR01	80	5045	4791	3/19/15	3/25/17	Contig	JCVI	SAMN03283318	GCA_000956745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/745/GCA_000956745.1_ASM95674v1	-	32600
Citrobacter freundii	546	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.45114	51.6	-	JTBJ01	3	5476	5079	11/14/14	7/6/17	Contig	US Food and Drug Administration 	SAMN02934525	GCA_000783755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/755/GCA_000783755.1_ASM78375v1	-	FDAARGOS_73
Leptospira santarosai	28183	PRJNA280848	280848	Spirochaetes	Spirochaetia	4.1559	41.8	-	LAZM01	169	4202	3816	5/15/15	4/3/17	Scaffold	Universidade Federal de Pelotas	SAMN03470254	GCA_001008335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/335/GCA_001008335.1_ASM100833v1	26272577	U164
Acinetobacter pittii	48296	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.94747	38.9	-	LLIF01	593	3897	3620	10/27/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145750	GCA_001416185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/185/GCA_001416185.1_ASM141618v1	-	ABBL135
Pseudomonas amygdali pv. lachrymans	53707	PRJNA282427	282427	Proteobacteria	Gammaproteobacteria	6.27666	58	-	LCWT01	69	5986	5524	5/13/15	4/3/17	Scaffold	KRIBB	SAMN03610503	GCA_001006445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/445/GCA_001006445.1_PSl_v01	26089433	98A-744
Enterobacter asburiae	61645	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.50022	56	-	JWCN01	121	4317	4181	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197073	GCA_001052135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/135/GCA_001052135.1_ASM105213v1	26230489	1119_ECLO
Oenococcus oeni PSU-1	203123	PRJNA317	317	Terrabacteria group	Firmicutes	1.78052	37.9	chromosome:NC_008528.1/CP000411.1	-	1	1831	1655	10/13/06	3/22/17	Complete Genome	"US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc."	SAMN02598484	GCA_000014385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/385/GCA_000014385.1_ASM1438v1	17030793	PSU-1
Pseudoalteromonas sp. MQS005	1854052	PRJNA323395	323395	Proteobacteria	Gammaproteobacteria	4.24361	40.4	-	LYRQ01	134	3930	3758	6/10/16	4/12/17	Contig	Shenzhen Institutes of Advanced Technology 	SAMN05178518	GCA_001661605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/661/605/GCA_001661605.1_TERMQS1.0	-	MQS005
Achromobacter xylosoxidans	85698	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	6.66617	67.6	-	DBER01	19	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453944	GCA_002294075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/075/GCA_002294075.1_ASM229407v1	28894102	-
Klebsiella variicola	244366	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.51845	57.3	-	JUXS01	217	5481	5260	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197874	GCA_001065855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/855/GCA_001065855.1_ASM106585v1	26230489	671_KVAR
Acinetobacter nosocomialis	106654	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.82783	38.7	-	DBET01	48	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455068	GCA_002294545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/545/GCA_002294545.1_ASM229454v1	28894102	-
Streptococcus oralis	1303	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.09857	39.2	-	JUOS01	211	2065	1949	7/10/15	4/3/17	Contig	University of Washington	SAMN03198108	GCA_001075875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/875/GCA_001075875.1_ASM107587v1	26230489	900_SORA
Staphylococcus hominis	1290	PRJEB10524	374818	Terrabacteria group	Firmicutes	2.28542	31.3	-	FBVK01	37	2293	2186	2/12/17	2/23/17	Scaffold	UNIVERSITY OF LIVERPOOL	SAMEA3515753	GCA_900006855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/006/855/GCA_900006855.1_S.hominis_B10	-	-
Lactobacillus paracasei	1597	PRJNA274162	274162	Terrabacteria group	Firmicutes	3.02342	46.2	-	JYBD01	92	3190	2942	3/10/15	4/3/17	Contig	Shanghai Jiao Tong University	SAMN03323315	GCA_000949485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/485/GCA_000949485.1_ASM94948v1	-	DSM 20207
Gardnerella vaginalis 00703Dmash	698960	PRJNA42453	42453	Terrabacteria group	Actinobacteria	1.4908	43.4	-	ADEV01	11	1199	1126	5/21/12	3/30/17	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393783	GCA_000263635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/635/GCA_000263635.1_ASM26363v1	-	00703Dmash
Lactobacillus crispatus	47770	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.13506	37.1	-	LYRG01	56	2212	2009	7/14/17	7/17/17	Scaffold	University of Minnesota	SAMN04498988	GCA_002218925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/925/GCA_002218925.1_ASM221892v1	-	UMNLC16
Pectobacterium carotovorum subsp. carotovorum	555	PRJNA269233	269233	Proteobacteria	Gammaproteobacteria	4.83243	52	-	JUJP01	16	4351	4173	12/29/14	4/2/17	Scaffold	Beijing Academy of Agriculture and Forestry Sciences	SAMN03252617	GCA_000808455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/455/GCA_000808455.1_ASM80845v1	-	YC D60
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.7581	47.6	-	MDZW01	79	3472	3299	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320398	GCA_001883335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/335/GCA_001883335.1_ASM188333v1	-	95/4881-1
Flavobacterium psychrophilum	96345	PRJEB21067	396411	FCB group	Bacteroidetes/Chlorobi group	2.60949	32.3	-	FYCM01	229	2448	2265	7/29/17	8/7/17	Contig	INRA	SAMEA104125749	GCA_900186485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/485/GCA_900186485.1_FPC831_V1	-	FPC 831
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.4661	67.4	-	LOXW01	102	6798	6449	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449279	GCA_001524605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/605/GCA_001524605.1_ASM152460v1	-	MSMB2043
Aeromonas hydrophila	644	PRJNA321178	321178	Proteobacteria	Gammaproteobacteria	4.83027	61.1894	plasmid pAH9791:NZ_CM004591.1/CM004591.1	LYZF01	42	4543	4332	8/17/16	4/5/17	Contig	Mississippi State University	SAMN04967787	GCA_001705905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/905/GCA_001705905.1_ASM170590v1	-	AL97-91
Vibrio sp. SALL6	1904359	PRJNA343874	343874	Proteobacteria	Gammaproteobacteria	4.98963	45.4	-	MQVK01	81	4786	4593	2/16/17	4/17/17	Contig	University of Malaya	SAMN06011221	GCA_002002385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/385/GCA_002002385.1_ASM200238v1	-	SALL6
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.24112	36.7	-	LPSI01	14	2357	2247	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305169	GCA_001560595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/595/GCA_001560595.1_NG05B_CO5_02	-	NG05B_CO5_02
Bifidobacterium breve	1685	PRJNA379831	379831	Terrabacteria group	Actinobacteria	2.28787	58.6	-	NAPZ01	22	2028	1844	3/31/17	4/6/17	Contig	University of Parma	SAMN06621718	GCA_002075865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/865/GCA_002075865.1_Bbif1900B	-	1900B
Mycobacterium abscessus M172	1162286	PRJNA89599	89599	Terrabacteria group	Actinobacteria	5.20446	64	-	AJSE01	33	5307	5157	5/4/12	5/19/17	Contig	"Universiti Malaya, Kuala Lumpur"	SAMN02471419	GCA_000261125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/125/GCA_000261125.1_ASM26112v1	22933758	M172
Moraxella catarrhalis	480	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.99389	41.6	-	JVRY01	40	1853	1724	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197348	GCA_001062815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/815/GCA_001062815.1_ASM106281v1	26230489	157.rep2_MCAT
Lactobacillus salivarius	1624	PRJNA321782	321782	Terrabacteria group	Firmicutes	2.26806	32.8	-	LXZT01	108	2338	2152	9/12/17	9/14/17	Contig	Seoul National University	SAMN05003791	GCA_002289985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/985/GCA_002289985.1_ASM228998v1	-	KLA001
Klebsiella oxytoca TDB-1	1421015	PRJNA227406	227406	Proteobacteria	Gammaproteobacteria	6.13528	55.9	-	JAKW01	15	5887	5555	4/21/17	5/1/17	Scaffold	Hunan Plant Protection Institute	SAMN02401956	GCA_002111445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/445/GCA_002111445.1_ASM211144v1	-	TDB-1
Cronobacter sakazakii	28141	PRJNA251685	251685	Proteobacteria	Gammaproteobacteria	4.54372	56.9	-	JOLD01	105	4442	4205	10/9/15	4/4/17	Contig	"Nottingham Trent University, UK"	SAMN02838910	GCA_001308965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/308/965/GCA_001308965.1_ASM130896v1	26438044	707
Enterobacter cloacae UCI 30	1400149	PRJNA219280	219280	Proteobacteria	Gammaproteobacteria	4.68881	55.6	-	JCKT01	9	4584	4356	2/3/14	3/24/17	Scaffold	Broad Institute	SAMN02356610	GCA_000534215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/215/GCA_000534215.1_Ente_cloa_UCI_30_V1	-	UCI 30
Proteus mirabilis	584	PRJNA337898	337898	Proteobacteria	Gammaproteobacteria	3.80064	39.4	-	MCOR01	610	3638	3411	11/7/16	4/5/17	Contig	"Faculte de Medecine, Universite Paris-Sud"	SAMN05513636	GCA_001867325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/325/GCA_001867325.1_ASM186732v1	-	1091
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.52468	32.6	-	CUDM01	89	2519	2382	3/31/15	3/26/17	Contig	SC	SAMEA1035065	GCA_001230025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/025/GCA_001230025.1_7067_4_50	-	51-24
Propionibacterium acnes HL038PA1	765085	PRJNA49203	49203	Terrabacteria group	Actinobacteria	2.53548	60.2	-	ADYD01	24	2582	2436	7/30/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189214	GCA_000144445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/445/GCA_000144445.1_ASM14444v1	-	HL038PA1
Burkholderia vietnamiensis	60552	PRJEB15690	347447	Proteobacteria	Betaproteobacteria	6.75842	67	-	FMVZ01	42	6204	5878	10/17/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02787148	GCA_900102765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/765/GCA_900102765.1_IMG-taxon_2615840639_annotated_assembly	-	WPB
Burkholderia sp. A9	1365108	PRJNA266743	266743	Proteobacteria	Betaproteobacteria	3.46106	65.5	-	JSZN01	98	3230	3024	12/16/14	4/10/17	Contig	University of Malaya	SAMN03174117	GCA_000801975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/975/GCA_000801975.1_ASM80197v1	25745000	A9
Campylobacter coli 80352	887288	PRJNA52713	52713	Proteobacteria	delta/epsilon subdivisions	1.91886	31.1	-	AIMT01	260	2032	1913	3/16/12	3/15/17	Contig	Cornell University	SAMN02429019	GCA_000253635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/635/GCA_000253635.2_ASM25363v2	-	80352
Mannheimia haemolytica	75985	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.58625	41.1	-	LQEG01	117	2650	2459	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366528	GCA_001929645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/645/GCA_001929645.1_ASM192964v1	-	2512MH
Treponema denticola ATCC 35405	243275	PRJNA4	4	Spirochaetes	Spirochaetia	2.8432	37.9	chromosome:NC_002967.9/AE017226.1	-	1	2838	2767	2/14/02	8/28/16	Complete Genome	TIGR	SAMN02603967	GCA_000008185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/185/GCA_000008185.1_ASM818v1	15064399	ATCC 35405
Serratia marcescens	615	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.65925	58.5	-	LETV01	13	5461	5130	6/19/15	3/26/17	Scaffold	Broad Institute	SAMN03280199	GCA_001030265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/265/GCA_001030265.1_Serr_marc_BWH57_V1	-	BWH57
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.17888	39.9	-	FQLG01	26	1073	966	5/10/17	5/24/17	Scaffold	WTSI	SAMEA1094377	GCA_900118865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/865/GCA_900118865.1_7067_6_69	-	09_05
Leuconostoc mesenteroides subsp. mesenteroides	33967	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.84828	37.8	-	MPLQ01	68	1872	1672	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981505	GCA_002092705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/705/GCA_002092705.1_ASM209270v1	28217118	LN32
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.12399	41.4	-	JJPP01	157	3545	3327	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708963	GCA_000979685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/685/GCA_000979685.1_gtlEnvA5udCFS	25756680	3.H.A.2.4
Yersinia enterocolitica	630	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	4.66872	47.1	-	CQAE01	22	4396	4218	3/22/15	3/26/17	Contig	SC	SAMEA1486389	GCA_001160345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/345/GCA_001160345.1_8016_2_61	-	IP26014
Bacillus megaterium	1404	PRJNA358455	358455	Terrabacteria group	Firmicutes	5.61088	37.8976	chromosome:NZ_CP018874.1/CP018874.1; plasmid 3:NZ_CP018876.1/CP018876.1; plasmid 4:NZ_CP018877.1/CP018877.1; plasmid 5:NZ_CP018878.1/CP018878.1; plasmid 6:NZ_CP018879.1/CP018879.1; plasmid 7:NZ_CP018880.1/CP018880.1; plasmid 8:NZ_CP018881.1/CP018881.1; plasmid unnamed2:NZ_CP018875.1/CP018875.1	-	8	5767	5328	3/2/17	3/8/17	Complete Genome	Zhejiang University	SAMN06174236	GCA_002009195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/195/GCA_002009195.1_ASM200919v1	-	JX285
Corynebacterium diphtheriae	1717	PRJNA341832	341832	Terrabacteria group	Actinobacteria	2.44409	53.6	-	MIOH01	58	2412	2210	11/10/16	8/24/17	Contig	National Institute for Communicable Diseases	SAMN05729424	GCA_001875945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/945/GCA_001875945.1_ASM187594v1	28726616	ST378-KZN-2015-45465
Sinorhizobium meliloti AK75	1194716	PRJNA167598	167598	Proteobacteria	Alphaproteobacteria	6.98806	61.9	-	AKZU01	699	7287	5625	8/13/12	4/4/17	Scaffold	University of Florence	SAMN02471744	GCA_000287515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/515/GCA_000287515.2_SMAK75_v1	23431003	AK75
Bordetella bronchiseptica M435/02/3	1331217	PRJNA202129	202129	Proteobacteria	Betaproteobacteria	5.15777	68.2	-	JGXE01	182	4937	4731	5/12/14	4/2/17	Contig	JCVI	SAMN02231460	GCA_000690175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/175/GCA_000690175.1_gbb21v01	25627438	M435/02/3
Listeria monocytogenes	1639	PRJNA229903	229903	Terrabacteria group	Firmicutes	3.05793	37.892	chromosome:NZ_CP020833.1/CP020833.1; plasmid pCFSAN004330:NZ_CP020834.1/CP020834.1	-	2	3122	3000	4/24/17	4/26/17	Complete Genome	FDA/CFSAN	SAMN03354355	GCA_002105715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/715/GCA_002105715.1_ASM210571v1	-	CFSAN004330
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31307	57.2358	chromosome 1:NZ_CP018534.1/CP018534.1; chromosome 2:NZ_CP018535.1/CP018535.1	-	2	3372	3144	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932962	GCA_002191555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/555/GCA_002191555.1_ASM219155v1	28388689	BwIM_SYR_53
Lactobacillus rhamnosus	47715	PRJNA280583	280583	Terrabacteria group	Firmicutes	2.96648	46.7	-	LAZE01	71	2987	2788	5/8/15	4/3/17	Contig	university of caen lower normandy	SAMN03465328	GCA_001005625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/625/GCA_001005625.1_ASM100562v1	26067954	CNCM-I-3698
Pasteurella multocida subsp. multocida	44283	PRJNA244081	244081	Proteobacteria	Gammaproteobacteria	2.29804	40.4	-	JQAG01	28	2179	2095	6/14/15	4/3/17	Contig	Murdoch University	SAMN02721548	GCA_001027825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/825/GCA_001027825.1_ASM102782v1	26151935	THF
Haemophilus parasuis SW140	1275973	PRJNA184686	184686	Proteobacteria	Gammaproteobacteria	1.41342	39.7	-	APCB01	77	1517	1484	8/7/13	1/8/14	Contig	Iowa State University	SAMN02470067	GCA_000444705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/705/GCA_000444705.1_ASM44470v1	24051319	SW140
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15547	41.2	-	CWDD01	81	2085	1920	6/23/15	3/26/17	Contig	SC	SAMEA1032785	GCA_001175565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/565/GCA_001175565.1_6903_6_2	-	EQUI0147
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.44575	66.3	-	JUQE01	238	4142	4004	7/10/15	3/26/17	Contig	University of Washington	SAMN03198070	GCA_001074705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/705/GCA_001074705.1_ASM107470v1	26230489	862_SMAL
Bacillus amyloliquefaciens	1390	PRJNA300579	300579	Terrabacteria group	Firmicutes	3.95883	46.4	-	LMUC01	16	3958	3795	4/8/16	4/5/17	Contig	University of Queensland	SAMN04226371	GCA_001617995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/995/GCA_001617995.1_ASM161799v1	-	H57
Chlamydia psittaci 08-2626_L3	1112246	PRJNA77065	77065	PVC group	Chlamydiae	1.22967	39.5	-	ATMX01	177	1093	899	7/2/13	4/10/17	Scaffold	University of Maryland School of Medicine	SAMN00860214	GCA_000417825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/825/GCA_000417825.1_ASM41782v1	-	08-2626_L3
"Enterococcus faecium 1,231,501"	565658	PRJNA32957	32957	Terrabacteria group	Firmicutes	2.87123	38.2	-	ACAY01	25	2856	2690	5/20/09	3/22/17	Scaffold	Broad Institute	SAMN02595269	GCA_000157555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/555/GCA_000157555.1_ASM15755v1	-	"1,231,501"
Neisseria gonorrhoeae SK17973	1352519	PRJNA209347	209347	Proteobacteria	Betaproteobacteria	2.07268	52.6	-	ATPQ01	425	2456	2054	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02338793	GCA_001025475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/475/GCA_001025475.1_ASM102547v1	-	SK17973
Streptococcus mutans TCI-204	1074155	PRJNA72053	72053	Terrabacteria group	Firmicutes	1.84716	37	-	AGLK01	136	1867	1746	10/6/11	3/22/17	Contig	JCVI	SAMN02436354	GCA_000229385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/385/GCA_000229385.2_SMUT6-NEX_4-204	-	TCI-204
Borrelia garinii IPT128	1408849	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.09821	28.3	-	AYAY01	565	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378816	GCA_000501855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/855/GCA_000501855.1_BorGarIPT128	-	IPT128
Enterococcus faecalis EnGen0311	749509	PRJNA47173	47173	Terrabacteria group	Firmicutes	3.16869	37	-	AEBZ01	86	3274	3129	9/9/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189116	GCA_000148125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/125/GCA_000148125.1_ASM14812v1	-	TX0635
Brucella suis bv. 2 str. BCB032	1210448	PRJNA170706	170706	Proteobacteria	Alphaproteobacteria	3.27678	57.3	-	ALON02	271	3363	3133	8/20/12	3/30/17	Contig	Beijing Institute of Disease Control and Prevention	SAMN02469346	GCA_000292105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/105/GCA_000292105.2_ASM29210v2	-	BCB032
Rhizobium leguminosarum bv. phaseoli CCGM1	1408223	PRJNA222534	222534	Proteobacteria	Alphaproteobacteria	6.87192	61.4	-	JFGP01	55	6763	6307	6/12/14	4/2/17	Scaffold	"Centro de Ciencias Genomicas, UNAM"	SAMN02370996	GCA_000705615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/615/GCA_000705615.1_CCGM1.1	25002426	CCGM1
Treponema pallidum subsp. pallidum	161	PRJNA322283	322283	Spirochaetes	Spirochaetia	1.13913	52.8	chromosome:NZ_CP016065.1/CP016065.1	-	1	1066	1004	8/25/16	4/5/17	Chromosome	"National Institute of Health, Portugal"	SAMN05150674	GCA_001713255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/255/GCA_001713255.1_ASM171325v1	-	PT_SIF1261
Borrelia burgdorferi IPT70	1408872	PRJNA223339	223339	Spirochaetes	Spirochaetia	0.41035	28	-	AYBV01	434	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378839	GCA_000501515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/515/GCA_000501515.1_BorBurgIPT70	-	IPT70
Burkholderia multivorans	87883	PRJNA386406	386406	Proteobacteria	Betaproteobacteria	6.29111	66.1	-	NGKL01	3787	7867	6898	7/20/17	7/20/17	Contig	DSO National Laboratories	SAMN06946673	GCA_002222875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/222/875/GCA_002222875.1_ASM222287v1	-	DSOPR57
Clostridium botulinum	1491	PRJNA290143	290143	Terrabacteria group	Firmicutes	3.0889	27.9	-	LHYP01	85	2949	2851	8/12/15	3/26/17	Scaffold	Anses	SAMN03876599	GCA_001266895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/895/GCA_001266895.1_ASM126689v1	26430029	49511-CD
Listeria monocytogenes R479a	1437838	PRJEB5108	242481	Terrabacteria group	Firmicutes	3.03165	37.8743	chromosome I:NZ_HG813247.1/HG813247.1; plasmid II:NZ_HG813248.1/HG813248.1	-	2	3105	2996	3/23/14	2/26/17	Complete Genome	VETMEDVIENNA	SAMEA3138991	GCA_000613085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/085/GCA_000613085.1_R479A_18022011	-	R479a
Salinispora arenicola CNT798	1137256	PRJNA169775	169775	Terrabacteria group	Actinobacteria	5.65735	69.5	-	AZXA01	66	5155	4846	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597257	GCA_000515015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/015/GCA_000515015.1_ASM51501v1	-	CNT798
Lactobacillus casei	1582	PRJEB21025	395523	Terrabacteria group	Firmicutes	2.9572	47.9	-	FXZN01	172	2855	2650	7/23/17	8/1/17	Contig	UANTW	SAMEA104094738	GCA_900185125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/125/GCA_900185125.1_AMBR2	-	-
Listeria monocytogenes 6179	1288295	PRJEB1355	194518	Terrabacteria group	Firmicutes	3.07283	37.8717	chromosome:NZ_HG813249.1/HG813249.1; plasmid LM6179:NZ_HG813250.1/HG813250.1	-	2	3151	3057	2/10/14	2/26/17	Complete Genome	VETMEDVIENNA	SAMEA3138937	GCA_000577745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/745/GCA_000577745.1_6179_18022011	-	6179
Vibrio parahaemolyticus VPCR-2009	1238223	PRJNA176658	176658	Proteobacteria	Gammaproteobacteria	5.10184	45.3	-	JDFL01	109	4942	4695	3/4/14	3/18/17	Scaffold	IGS	SAMN01940374	GCA_000593305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/305/GCA_000593305.2_vpVPCR2009	-	VPCR-2009
Streptococcus mitis	28037	PRJNA308844	308844	Terrabacteria group	Firmicutes	1.99917	40.1	-	LROV01	61	2029	1803	3/11/16	4/5/17	Contig	University of Kaiserslautern	SAMN04432976	GCA_001588605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/605/GCA_001588605.1_ASM158860v1	-	M3-4
Oenococcus oeni IOEB_C23	1428423	PRJNA229549	229549	Terrabacteria group	Firmicutes	1.83766	37.8	-	AZJU01	47	1898	1691	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02902398	GCA_000761925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/925/GCA_000761925.1_Oeoe_IOEB_C23_1.0	24901216	IOEB_C23
Xanthomonas oryzae pv. oryzae	64187	PRJNA269390	269390	Proteobacteria	Gammaproteobacteria	4.40974	63.8	-	JXDM01	446	4435	3560	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252489	GCA_001927405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/405/GCA_001927405.1_ASM192740v1	-	BXO1
Campylobacter fetus subsp. venerealis cfvi92/203	1273272	PRJNA184003	184003	Proteobacteria	delta/epsilon subdivisions	1.93186	33.2	-	LRVL01	133	2006	1871	8/5/16	4/5/17	Contig	Utrecht University	SAMN04445795	GCA_001699565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/565/GCA_001699565.1_ASM169956v1	27333878	cfvi92/203
Xanthomonas citri pv. malvacearum X18	1220027	PRJNA172044	172044	Proteobacteria	Gammaproteobacteria	4.99192	64.7339	chromosome:NZ_CM002136.1/CM002136.1; plasmid unnamed1:NZ_CM002137.1/CM002137.1; plasmid unnamed2:NZ_CM002138.1/CM002138.1	ATMA01	4	4502	4056	7/25/13	4/2/17	Chromosome	French Network on Xanthomonads	SAMN02469929	GCA_000454505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/505/GCA_000454505.1_20120625	23990578	X18
Lactobacillus delbrueckii subsp. bulgaricus	1585	PRJNA314465	314465	Terrabacteria group	Firmicutes	1.77788	49.8	-	LUGK01	129	1829	1587	5/18/16	4/5/17	Contig	GENOBOX	SAMN04535277	GCA_001647065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/065/GCA_001647065.1_ASM164706v1	-	LBB.B5
Yersinia pseudotuberculosis	633	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.84925	47.4	-	CQEB01	98	4507	4258	3/22/15	4/3/17	Scaffold	SC	SAMEA859909	GCA_001166025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/025/GCA_001166025.1_5139_2_10	-	OK5586
Brucella abortus bv. 9 str. C68	520455	PRJNA33575	33575	Proteobacteria	Alphaproteobacteria	3.26958	57.2	-	ACEL01	13	3328	3122	2/18/09	3/22/17	Scaffold	Broad Institute	SAMN02595293	GCA_000158795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/795/GCA_000158795.1_ASM15879v1	-	C68
Francisella tularensis subsp. holarctica FSC022	430556	PRJNA19015	19015	Proteobacteria	Gammaproteobacteria	1.86649	32.1	-	AAYD01	9	1919	1522	5/14/07	3/30/17	Scaffold	Broad Institute	SAMN02595215	GCA_000154145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/145/GCA_000154145.1_ASM15414v1	-	FSC022
Shigella boydii	621	PRJNA293194	293194	Proteobacteria	Gammaproteobacteria	4.476	50.5	-	LPSY01	336	5092	4253	12/15/16	3/5/17	Contig	"University of Maryland, School of Medicine"	SAMN04001710	GCA_001906365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/365/GCA_001906365.1_100706	-	100706
Streptococcus salivarius	1304	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.26234	39.8	-	JVSQ01	166	2115	2002	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197330	GCA_001070595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/595/GCA_001070595.1_ASM107059v1	26230489	140_SSAL
Clostridioides difficile T3	1215079	PRJEB209	222752	Terrabacteria group	Firmicutes	4.06058	28.6	-	CAMW01	275	3791	3662	10/14/13	3/15/17	Scaffold	LPBA	SAMEA3138902	GCA_000531225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/225/GCA_000531225.1_T3	24482682	T3
Vibrio cholerae V51	345075	PRJNA15669	15669	Proteobacteria	Gammaproteobacteria	4.20862	47.5	-	AAKI03	80	4012	3674	9/13/05	3/26/17	Scaffold	TIGR	SAMN02435835	GCA_000152465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/465/GCA_000152465.2_ASM15246v2	-	V51
Ralstonia solanacearum	305	PRJNA378704	378704	Proteobacteria	Betaproteobacteria	5.18985	66.8	-	MXAM01	145	4622	4386	3/16/17	3/18/17	Scaffold	NCDC Lugar Center	SAMN06560052	GCA_002029885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/885/GCA_002029885.1_ASM202988v1	-	GEO_57
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	3.02095	37.8667	chromosome:NZ_CP020828.1/CP020828.1; plasmid pCFSAN022990:NZ_CP020829.1/CP020829.1	-	2	3082	2883	4/24/17	4/26/17	Complete Genome	FDA/CFSAN	SAMN02990220	GCA_002105635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/635/GCA_002105635.1_ASM210563v1	-	CFSAN022990
Burkholderia mallei	13373	PRJNA244038	244038	Proteobacteria	Betaproteobacteria	5.36284	68.3	-	JNLU01	31	5925	5237	9/4/15	4/4/17	Scaffold	Los Alamos National Laboratory	SAMN02837832	GCA_001279255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/255/GCA_001279255.1_BMO	-	Turkey9
Bacillus pumilus	1408	PRJNA344842	344842	Terrabacteria group	Firmicutes	3.50652	40.9	-	MKZN01	36	3624	3551	1/6/17	1/6/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05846351	GCA_001938995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/995/GCA_001938995.1_ASM193899v1	-	GM3FR
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.0916	37.8646	chromosome:NC_021838.1/CP006594.1; plasmid unnamed:NC_021828.1/CP006595.1	-	2	3156	3030	7/16/13	2/26/17	Complete Genome	University of California at Davis	SAMN02203126	GCA_000438585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/585/GCA_000438585.1_ASM43858v1	-	R2-502
Chlamydia gallinacea	1457153	PRJNA374394	374394	PVC group	Chlamydiae	1.06701	37.8572	chromosome:NZ_CP019792.1/CP019792.1; plasmid pJX1:NZ_CP019793.1/CP019793.1	-	2	965	893	2/28/17	3/2/17	Complete Genome	Yangzhou University	SAMN06323233	GCA_002007725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/725/GCA_002007725.1_ASM200772v1	-	JX-1
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.34467	66.8	-	MUJS01	13	6966	6636	2/3/17	3/29/17	Contig	University of British Columbia	SAMN05001990	GCA_001984355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/355/GCA_001984355.1_ASM198435v1	-	VC3917
Lactobacillus reuteri	1598	PRJNA342243	342243	Terrabacteria group	Firmicutes	2.37218	38.6	-	MIMV01	257	2396	2179	5/11/17	5/22/17	Contig	Seoul National University	SAMN05751496	GCA_002128765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/765/GCA_002128765.1_ASM212876v1	-	KLR3006
Bacteroides fragilis str. 1007-1-F #4	1339338	PRJNA206181	206181	FCB group	Bacteroidetes/Chlorobi group	5.41339	43	-	JGDK01	167	4966	4596	3/20/14	4/4/17	Contig	IGS	SAMN02315075	GCA_000598545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/545/GCA_000598545.2_ASM59854v2	-	1007-1-F #4
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.69548	50.6	-	CXKU01	455	5293	4521	7/16/15	2/24/17	Contig	SC	SAMEA1968803	GCA_001254175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/175/GCA_001254175.1_8290_4_52	-	109275
Chlamydia gallinacea 08-1274/3	1143323	PRJNA209652	209652	PVC group	Chlamydiae	1.0672	37.8557	chromosome:NZ_CP015840.1/CP015840.1; plasmid p1274:NZ_CP015841.1/CP015841.1	-	2	971	912	5/25/16	4/12/17	Complete Genome	Insititute for Genome Sciences	SAMN02435823	GCA_000471025.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/025/GCA_000471025.2_ASM47102v2	24461712	08-1274/3
Bacillus licheniformis	1402	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.28833	45.9	-	NPCY01	112	4484	4327	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372728	GCA_002271465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/465/GCA_002271465.1_assembly-7727_v1	-	7727
Vibrio vulnificus	672	PRJNA261393	261393	Proteobacteria	Gammaproteobacteria	5.05287	46.5	-	LIIO01	220	4613	4428	9/1/15	4/4/17	Contig	Technion	SAMN03073547	GCA_001277815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/815/GCA_001277815.1_ASM127781v1	26472833	V252
Pseudomonas syringae pv. rhaphiolepidis	264457	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.48302	58.3	-	LJRE01	446	5157	4538	10/20/15	4/21/17	Scaffold	University of Toronto	SAMN03976258	GCA_001400995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/995/GCA_001400995.1_PrhICMP9756	-	ICMP9756
Streptococcus suis 13730	1214159	PRJNA171414	171414	Terrabacteria group	Firmicutes	1.96124	41.3	-	ALKU01	46	1969	1851	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02470631	GCA_000440315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/315/GCA_000440315.1_version1	-	13730
Bacillus megaterium NBRC 15308 = ATCC 14581	1348623	PRJNA238207	238207	Terrabacteria group	Firmicutes	5.74664	37.8506	chromosome:NZ_CP009920.1/CP009920.1; plasmid pBMV_1:NZ_CP009919.1/CP009919.1; plasmid pBMV_2:NZ_CP009921.1/CP009921.1; plasmid pBMV_3:NZ_CP009915.1/CP009915.1; plasmid pBMV_4:NZ_CP009918.1/CP009918.1; plasmid pBMV_5:NZ_CP009916.1/CP009916.1; plasmid pBMV_6:NZ_CP009917.1/CP009917.1	-	7	5952	5607	2/5/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03174779	GCA_000832985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/985/GCA_000832985.1_ASM83298v1	25931591	ATCC 14581
Enterococcus faecium NRRL B-2354	1104325	PRJNA74725	74725	Terrabacteria group	Firmicutes	2.84989	37.8496	chromosome:NC_020207.1/CP004063.1; plasmid pNB2354_1:NC_020208.1/CP004064.1	-	2	2920	2719	2/4/13	3/23/17	Complete Genome	"University of California, Davis"	SAMN02604149	GCA_000336405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/405/GCA_000336405.1_ASM33640v1	24413604	NRRL B-2354
Enterococcus durans	53345	PRJNA291946	291946	Terrabacteria group	Firmicutes	3.07188	37.8306	chromosome:NZ_CP012384.1/CP012384.1; plasmid unnamed 1:NZ_CP012385.1/CP012385.1; plasmid unnamed 2:NZ_CP012386.1/CP012386.1	-	3	2987	2521	8/17/15	4/10/17	Complete Genome	Northeast Agricultural University	SAMN03956792	GCA_001267865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/865/GCA_001267865.1_ASM126786v1	-	KLDS 6.0930
Fusobacterium nucleatum subsp. nucleatum	76856	PRJNA270147	270147	Fusobacteria	Fusobacteriia	2.47067	27.1	-	LMVH01	3	2445	2295	1/11/16	4/5/17	Scaffold	Chosun University	SAMN03263580	GCA_001510735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/735/GCA_001510735.1_ASM151073v1	-	ChDC F311
Bifidobacterium longum subsp. infantis	1682	PRJEB7117	270920	Terrabacteria group	Actinobacteria	2.82188	59.9	-	CCWQ01	54	2682	2429	12/19/14	4/2/17	Contig	CHUV-UNIL	SAMEA2747187	GCA_000825085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/085/GCA_000825085.1_BIC1401212621b.V1	-	BIC1401212621b
Shigella flexneri 2a	42897	PRJNA278281	278281	Proteobacteria	Gammaproteobacteria	4.48639	50.6	-	LAIE01	407	5046	4258	6/1/15	3/5/17	Contig	U.S. Food and Drug Administration	SAMN03420995	GCA_001017225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/225/GCA_001017225.1_ASM101722v1	25980352	BS1045
Enterococcus durans	53345	PRJNA291957	291957	Terrabacteria group	Firmicutes	3.0718	37.8306	chromosome:NZ_CP012366.1/CP012366.1; plasmid unnamed 1:NZ_CP012367.1/CP012367.1; plasmid unnamed 2:NZ_CP012368.1/CP012368.1	-	3	2989	2537	8/13/15	4/10/17	Complete Genome	Northeast Agricultural University	SAMN03956931	GCA_001267395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/395/GCA_001267395.1_ASM126739v1	-	KLDS6.0933
Pseudomonas putida	303	PRJDB3352	274628	Proteobacteria	Gammaproteobacteria	6.4349	62.1	-	BBQL01	135	6013	5766	2/4/15	4/3/17	Contig	National Institute of Advanced Industrial Science and Technology (AIST)	SAMD00023457	GCA_000875995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/875/995/GCA_000875995.1_ASM87599v1	-	KF703
Xylella fastidiosa	2371	PRJEB18221	355485	Proteobacteria	Gammaproteobacteria	2.43165	51.4	-	FQWN01	63	2302	2089	12/2/16	4/6/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660380	GCA_900129695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/695/GCA_900129695.1_IMG-taxon_2595698223_annotated_assembly	-	DSM 10026
Leptospira interrogans str. UI 08452	1049935	PRJNA74105	74105	Spirochaetes	Spirochaetia	4.86482	35.2	-	AHNL02	66	4519	4031	1/24/12	5/18/17	Contig	J. Craig Venter Institute	SAMN02436590	GCA_000244175.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/175/GCA_000244175.3_gls454099v02	-	UI 08452
Enterococcus faecium	1352	PRJEB14733	330941	Terrabacteria group	Firmicutes	3.27243	37.8244	chromosome 1:NZ_LT598663.1/LT598663.1; plasmid 2:NZ_LT598664.1/LT598664.1; plasmid 3:NZ_LT598665.1/LT598665.1; plasmid 4:NZ_LT598666.1/LT598666.1; plasmid 5:NZ_LT598667.1/LT598667.1; plasmid 6:NZ_LT598668.1/LT598668.1	-	6	3382	3137	7/22/16	3/18/17	Complete Genome	UNIVERSITY OF MELBOURNE	SAMEA4067785	GCA_900092475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/475/GCA_900092475.1_Ef_aus00233	-	-
Enterococcus faecium	1352	PRJNA281247	281247	Terrabacteria group	Firmicutes	3.10803	37.8205	chromosome:NZ_CP011281.1/CP011281.1; plasmid p1:NZ_CP011282.1/CP011282.1; plasmid p2:NZ_CP011283.1/CP011283.1; plasmid p3:NZ_CP015123.1/CP015123.1; plasmid p4:NZ_CP011284.1/CP011284.1; plasmid p5:NZ_CP011285.1/CP011285.1	-	6	3204	2984	5/2/16	3/28/17	Complete Genome	New York Medical College	SAMN03486724	GCA_001635875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/875/GCA_001635875.1_ASM163587v1	-	E39
Enterococcus faecium	1352	PRJNA353653	353653	Terrabacteria group	Firmicutes	3.24267	37.8111	chromosome:NZ_CP018071.1/CP018071.1; plasmid unnamed1:NZ_CP018070.1/CP018070.1; plasmid unnamed2:NZ_CP018072.1/CP018072.1; plasmid unnamed3:NZ_CP018073.1/CP018073.1	-	4	3351	3075	12/9/16	3/28/17	Complete Genome	St Jude Children's Research Hospital	SAMN06018903	GCA_001895905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/905/GCA_001895905.1_ASM189590v1	-	VRE001
Streptococcus pneumoniae	1313	PRJDB5486	368847	Terrabacteria group	Firmicutes	2.26795	39.6	chromosome:AP018044.1	-	1	2373	2303	4/29/17	4/29/17	Chromosome	"Department of Infectious Diseases, Keio University School of Medicine"	SAMD00073750	GCA_002358035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/358/035/GCA_002358035.1_ASM235803v1	-	KK1157
Enterococcus faecium	1352	PRJNA311738	311738	Terrabacteria group	Firmicutes	3.15141	37.8021	chromosome:CP014449.1; plasmid unnamed1:CP014450.1; plasmid unnamed2:CP014451.1; plasmid unnamed3:CP014452.1	-	4	3145	2725	3/21/16	3/21/16	Complete Genome	Memorial Sloan Kettering Cancer Center	SAMN04488250	GCA_001594345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/345/GCA_001594345.1_ASM159434v1	-	ATCC 700221
Listeria monocytogenes	1639	PRJNA371291	371291	Terrabacteria group	Firmicutes	2.96682	37.8	chromosome:NZ_CP019621.1/CP019621.1	-	1	3040	2907	2/14/17	3/2/17	Complete Genome	Canadian Food Inspection Agency	SAMN06297526	GCA_001999085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/085/GCA_001999085.1_ASM199908v1	-	10-092876-1235 LM8
Haemophilus influenzae	727	PRJNA235929	235929	Proteobacteria	Gammaproteobacteria	1.92599	38.2	-	JMQP01	2	1936	1771	2/18/15	3/25/17	Contig	Griffith University	SAMN02595603	GCA_000877255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/255/GCA_000877255.1_ASM87725v1	-	1209
Prochlorococcus marinus bv. HNLC1	1041938	PRJNA67829	67829	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.56962	29.9	-	-	1	-	-	-	-	Scaffold	J. Craig Venter Institute	SAMN02954344	GCA_000218705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/705/GCA_000218705.1_HNLC1	-	-
Mycobacterium bovis	1765	PRJNA214551	214551	Terrabacteria group	Actinobacteria	4.30177	65.5	-	JQEW01	85	4257	4003	9/8/14	4/2/17	Contig	South American Mycobacterium bovis WGS	SAMN02902645	GCA_000749745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/745/GCA_000749745.1_ASM74974v1	-	0822-11
Mycobacterium avium subsp. hominissuis MAH 27-1	1402213	PRJNA219499	219499	Terrabacteria group	Actinobacteria	4.79393	69	-	AWXK01	977	4871	3966	11/26/13	4/2/17	Contig	Robert Koch Institute	SAMN02470866	GCA_000500005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/005/GCA_000500005.1_MycAHom1.0	-	MAH 27-1
Clostridium perfringens	1502	PRJNA327444	327444	Terrabacteria group	Firmicutes	3.59953	28	-	MARS01	51	3318	3147	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323894	GCA_001949515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/515/GCA_001949515.1_ASM194951v1	28062388	JFP836
Xanthomonas campestris	339	PRJNA283309	283309	Proteobacteria	Gammaproteobacteria	5.11899	65.6	-	LHBS01	196	4460	4131	8/11/15	4/4/17	Contig	FDA	SAMN03897577	GCA_001264425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/425/GCA_001264425.1_CFSAN033085	26450732	CFSAN033085
Lactococcus lactis subsp. lactis bv. diacetylactis str. TIFN2	1234601	PRJNA175670	175670	Terrabacteria group	Firmicutes	2.50507	35.1	-	ATBF01	143	2666	2301	8/19/13	4/1/17	Contig	Top Institute Food and Nutrition	SAMN02472113	GCA_000447905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/905/GCA_000447905.1_LLDT2.01	23823494	TIFN2
Enterococcus faecalis	1351	PRJNA352597	352597	Terrabacteria group	Firmicutes	2.66825	37.8	chromosome:NZ_CP018102.1/CP018102.1	-	1	2660	2543	11/28/16	3/28/17	Complete Genome	USP	SAMN06042544	GCA_001886675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/675/GCA_001886675.1_ASM188667v1	-	L12
Staphylococcus epidermidis NIH051668	1155131	PRJNA86757	86757	Terrabacteria group	Firmicutes	2.69295	31.8	-	AKHK01	73	2703	2478	7/9/12	3/24/17	Contig	NIH-NISC	SAMN00993214	GCA_000275985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/985/GCA_000275985.2_ASM27598v2	-	NIH051668
Leuconostoc mesenteroides subsp. mesenteroides	33967	PRJNA312878	312878	Terrabacteria group	Firmicutes	1.98657	37.8	chromosome:NZ_CP014610.1/CP014610.1	-	1	2007	1886	3/9/16	4/5/17	Complete Genome	State Key Laboratory of Dairy Biotechnology	SAMN04508169	GCA_001583825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/825/GCA_001583825.1_ASM158382v1	-	BD3749
Yersinia pestis Nepal516	377628	PRJNA30503	30503	Proteobacteria	Gammaproteobacteria	4.62908	47.6	-	ACNQ01	23	4403	4181	5/8/09	5/19/17	Scaffold	ERIC (Enteropathogen Resource Integration Center)	SAMN02403941	GCA_000182485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/182/485/GCA_000182485.1_ASM18248v1	-	Nepal516
Pseudomonas fluorescens BBc6R8	463794	PRJNA20583	20583	Proteobacteria	Gammaproteobacteria	6.94648	61	-	AKXH02	153	6418	6282	9/17/12	4/2/17	Contig	Institut National de la Recherche Agronomique	SAMN02304079	GCA_000297195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/195/GCA_000297195.2_Pseudomonas.strain_BBc6R8_v2.0	24407649	BBc6R8
Enterococcus faecalis OG1RF	474186	PRJNA20843	20843	Terrabacteria group	Firmicutes	2.73963	37.8	chromosome:NC_017316.1/CP002621.1	-	1	2710	2602	4/6/11	3/22/17	Complete Genome	Baylor College of Medicine	SAMN02603002	GCA_000172575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/575/GCA_000172575.2_ASM17257v2	-	OG1RF
Enterococcus faecium	1352	PRJNA292809	292809	Terrabacteria group	Firmicutes	3.13059	37.793	chromosome:NZ_CP018828.1/CP018828.1; plasmid p1_ISMMS_VRE12:NZ_CP018827.1/CP018827.1; plasmid p2_ISMMS_VRE12:NZ_CP018825.1/CP018825.1; plasmid p3_ISMMS_VRE12:NZ_CP018829.1/CP018829.1; plasmid p4_ISMMS_VRE12:NZ_CP018826.1/CP018826.1	-	5	3235	2999	1/17/17	3/28/17	Complete Genome	Mount Sinai School of Medicine	SAMN03988631	GCA_001953235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/235/GCA_001953235.1_ASM195323v1	28301471	ISMMS_VRE_12
Enterococcus faecium	1352	PRJNA292804	292804	Terrabacteria group	Firmicutes	3.1267	37.7927	chromosome:NZ_CP018830.1/CP018830.1; plasmid p1_ISMMS_VRE9:NZ_CP018832.1/CP018832.1; plasmid p2_ISMMS_VRE9:NZ_CP018831.1/CP018831.1; plasmid p3_ISMMS_VRE9:NZ_CP018834.1/CP018834.1; plasmid p4_ISMMS_VRE9:NZ_CP018833.1/CP018833.1	-	5	3231	2994	1/17/17	3/28/17	Complete Genome	Mount Sinai School of Medicine	SAMN03988627	GCA_001953255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/255/GCA_001953255.1_ASM195325v1	28301471	ISMMS_VRE_9
Enterococcus faecium	1352	PRJNA292807	292807	Terrabacteria group	Firmicutes	3.1403	37.7427	chromosome:NZ_CP016163.1/CP016163.1; plasmid ISMMS_VRE11_p1:NZ_CP016164.1/CP016164.1; plasmid ISMMS_VRE11_p2:NZ_CP016165.1/CP016165.1; plasmid ISMMS_VRE11_p3:NZ_CP016166.1/CP016166.1; plasmid ISMMS_VRE11_p4:NZ_CP016167.1/CP016167.1; plasmid ISMMS_VRE11_p5:NZ_CP016168.1/CP016168.1; plasmid ISMMS_VRE11_p6:NZ_CP016169.1/CP016169.1	-	7	3245	2910	9/8/16	4/17/17	Complete Genome	Mount Sinai School of Medicine	SAMN03988630	GCA_001721905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/905/GCA_001721905.1_ASM172190v1	28301471	ISMMS_VRE_11
Enterococcus faecium	1352	PRJNA353757	353757	Terrabacteria group	Firmicutes	3.20874	37.7375	chromosome:NZ_CP018065.1/CP018065.1; plasmid pE1_13:NZ_CP018068.1/CP018068.1; plasmid pE1_230:NZ_CP018066.1/CP018066.1; plasmid pE1_29:NZ_CP018067.1/CP018067.1; plasmid pE1_3:NZ_CP018069.1/CP018069.1	-	5	3332	3104	11/28/16	3/28/17	Complete Genome	EvoTAR	SAMN06019998	GCA_001886635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/635/GCA_001886635.1_ASM188663v1	-	E1
Enterococcus faecium	1352	PRJNA407052	407052	Terrabacteria group	Firmicutes	3.07161	37.702	chromosome:CP023423.1; plasmid pTT39_p1:CP023424.1; plasmid pTT39_p2:CP023425.1; plasmid pTT39_p3:CP023426.1; plasmid pTT39_p4:CP023427.1	-	5	3164	2879	9/21/17	9/21/17	Complete Genome	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN07638053	GCA_002334625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/625/GCA_002334625.1_ASM233462v1	-	K60-39
Pseudomonas fluorescens BS2	1231390	PRJNA174875	174875	Proteobacteria	Gammaproteobacteria	6.12326	60.6	-	AMZG01	122	5660	5476	10/30/12	5/19/17	Contig	LSHTM	SAMN01173945	GCA_000308175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/175/GCA_000308175.1_PseuFluoBS2	-	BS2
Yersinia pestis biovar Orientalis str. India 195	547047	PRJNA30507	30507	Proteobacteria	Gammaproteobacteria	4.71961	47.6	-	ACNR01	33	4544	4311	5/8/09	5/19/17	Scaffold	ERIC (Enteropathogen Resource Integration Center)	SAMN02403942	GCA_000182505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/182/505/GCA_000182505.1_ASM18250v1	-	India 195
Staphylococcus lutrae	155085	PRJNA379140	379140	Terrabacteria group	Firmicutes	2.53312	37.7	chromosome:NZ_CP020773.1/CP020773.1	-	1	2354	2204	4/20/17	5/1/17	Complete Genome	Illinois Institute of Technology	SAMN06602281	GCA_002101335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/335/GCA_002101335.1_ASM210133v1	-	ATCC 700373
Staphylococcus epidermidis NIH04003	1155132	PRJNA86759	86759	Terrabacteria group	Firmicutes	2.49336	32.1	-	AKHJ01	61	2455	2282	7/9/12	3/23/17	Contig	NIH-NISC	SAMN00993757	GCA_000276005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/005/GCA_000276005.1_ASM27600v1	-	NIH04003
Streptococcus intermedius	1338	PRJNA231221	231221	Terrabacteria group	Firmicutes	1.91389	37.7	chromosome:NZ_CP020433.1/CP020433.1	-	1	1918	1710	3/29/17	4/11/17	Complete Genome	US Food and Drug Administration 	SAMN04875570	GCA_002073355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/355/GCA_002073355.1_ASM207335v1	-	FDAARGOS_233
Lactococcus lactis subsp. lactis bv. diacetylactis str. TIFN4	1283280	PRJNA175672	175672	Terrabacteria group	Firmicutes	2.55039	35	-	ATBD01	182	2688	2354	8/19/13	4/1/17	Contig	Top Institute Food and Nutrition	SAMN02472114	GCA_000447985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/985/GCA_000447985.1_LLDT4.01	23823494	TIFN4
Xanthomonas campestris	339	PRJNA283309	283309	Proteobacteria	Gammaproteobacteria	5.13857	65.5	-	LHBR01	210	4480	4149	8/11/15	4/4/17	Contig	FDA	SAMN03897576	GCA_001264435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/435/GCA_001264435.1_CFSAN033084	-	CFSAN033084
Clostridium perfringens	1502	PRJNA327445	327445	Terrabacteria group	Firmicutes	3.81923	28	-	MART01	79	3588	3404	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323895	GCA_001949535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/535/GCA_001949535.1_ASM194953v1	28062388	JFP914
Mycobacterium avium 05-4293	1392002	PRJNA216942	216942	Terrabacteria group	Actinobacteria	5.15605	69.2	-	AYLW01	190	4897	4354	12/9/13	4/2/17	Contig	National Animal Disease Center	SAMN02470578	GCA_000504745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/745/GCA_000504745.1_MAA_4293_version_1	24482526	May-93
Mycobacterium bovis	1765	PRJNA214551	214551	Terrabacteria group	Actinobacteria	4.33249	65.6	-	JQEX01	68	4262	4020	9/8/14	4/2/17	Contig	South American Mycobacterium bovis WGS	SAMN02902639	GCA_000749765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/765/GCA_000749765.1_ASM74976v1	-	61-09
Prochlorococcus marinus bv. HNLC2	1041939	PRJNA67831	67831	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.48449	30.4	-	-	1	-	-	-	-	Scaffold	J. Craig Venter Institute	SAMN02954344	GCA_000218745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/745/GCA_000218745.1_HNLC2	-	-
Haemophilus influenzae 2019	1232659	PRJNA283325	283325	Proteobacteria	Gammaproteobacteria	1.91799	38.1	-	LCVK01	44	1959	1833	5/14/15	3/26/17	Contig	University of Iowa	SAMN03614184	GCA_001007605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/605/GCA_001007605.1_2019	-	2019
Streptococcus gallolyticus subsp. gallolyticus DSM 16831	1258574	PRJNA357355	357355	Terrabacteria group	Firmicutes	2.4929	37.7	chromosome:NZ_CP018822.1/CP018822.1	-	1	2490	2336	2/16/17	4/6/17	Complete Genome	Herz- und Diabeteszentrum Nordrhein-Westfalen Universitaetsklinik der Ruhr-Universitaet Bochum 	SAMN06140979	GCA_002000985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/985/GCA_002000985.1_ASM200098v1	-	DSM 16831
Enterococcus faecalis	1351	PRJNA352597	352597	Terrabacteria group	Firmicutes	2.69304	37.7	chromosome:NZ_CP018004.1/CP018004.1	-	1	2706	2578	11/14/16	3/28/17	Complete Genome	USP	SAMN05990127	GCA_001878735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/735/GCA_001878735.1_ASM187873v1	-	L9
Streptococcus pneumoniae TIGR4	170187	PRJNA76613	76613	Terrabacteria group	Firmicutes	2.16334	39.7	chromosome:NZ_AKVY01000001.1/AKVY01000001.1	AKVY01	1	2347	2101	6/25/12	3/2/17	Chromosome	Broad Institute	SAMN02597080	GCA_000273445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/445/GCA_000273445.1_Stre_pneu_Tigr4_V1	22829535	TIGR4
Enterococcus faecalis	1351	PRJDB5023	336322	Terrabacteria group	Firmicutes	2.70486	37.7	chromosome:AP017623.1	-	1	2600	2537	8/5/16	8/5/16	Complete Genome	Okayama University of Science	SAMD00056606	GCA_002355755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/755/GCA_002355755.1_ASM235575v1	-	W11
Streptococcus infantarius	102684	PRJNA306242	306242	Terrabacteria group	Firmicutes	1.81829	37.7	chromosome:NZ_CP013689.1/CP013689.1	-	1	1852	1615	12/22/15	4/11/17	Complete Genome	Nestle Research Center and Nestle Institute of Health Sciences 	SAMN04348603	GCA_001477615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/615/GCA_001477615.1_ASM147761v1	26981577	ICDDRB-NRC-S5
Streptococcus gallolyticus	315405	PRJNA306242	306242	Terrabacteria group	Firmicutes	2.0525	37.7	chromosome:NZ_CP013688.1/CP013688.1	-	1	2125	1759	12/22/15	4/11/17	Complete Genome	Nestle Research Center and Nestle Institute of Health Sciences 	SAMN04348601	GCA_001477575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/575/GCA_001477575.1_ASM147757v1	-	ICDDRB-NRC-S1
Leptospira interrogans str. UI 09600	1049936	PRJNA74111	74111	Spirochaetes	Spirochaetia	4.71652	35	-	AHNO02	55	4283	3831	1/24/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436377	GCA_000244235.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/235/GCA_000244235.3_gls454102v2.0	-	UI 09600
Xylella fastidiosa subsp. multiplex	644357	PRJNA314983	314983	Proteobacteria	Gammaproteobacteria	2.46675	51.8	-	LUYC01	128	2167	1815	1/25/17	1/25/17	Contig	INRA	SAMN04546448	GCA_001971475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/475/GCA_001971475.1_ASM197147v1	-	CFBP8416
Pseudomonas putida	303	PRJNA268580	268580	Proteobacteria	Gammaproteobacteria	6.0013	63.9	-	JXOG01	191	5492	5286	2/20/15	4/3/17	Contig	University of Applied Sciences of Western Switzerland hepia	SAMN02687626	GCA_000878325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/325/GCA_000878325.1_UASWS0946_1.0	26450728	UASWS0946
Leuconostoc mesenteroides KFRI-MG	427140	PRJNA18679	18679	Terrabacteria group	Firmicutes	1.89641	37.7	chromosome:NZ_CP000574.1/CP000574.1	-	1	1905	1778	1/3/14	4/2/17	Complete Genome	Macrogen	SAMN02641526	GCA_000512955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/955/GCA_000512955.1_ASM51295v1	-	KFRI-MG
Shigella flexneri 2a	42897	PRJNA278281	278281	Proteobacteria	Gammaproteobacteria	4.51724	50.6	-	LAHW01	372	5067	4266	6/1/15	3/5/17	Contig	U.S. Food and Drug Administration	SAMN03418659	GCA_001017235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/235/GCA_001017235.1_ASM101723v1	25980352	BS1022
Bifidobacterium longum subsp. infantis	1682	PRJEB7117	270920	Terrabacteria group	Actinobacteria	2.78753	59.8	-	CCWU01	50	2654	2407	12/19/14	4/2/17	Contig	CHUV-UNIL	SAMEA2747188	GCA_000825105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/105/GCA_000825105.1_BIB1401242951.V1	-	BIB1401242951
Fusobacterium nucleatum	851	PRJNA338014	338014	Fusobacteria	Fusobacteriia	2.1434	27	-	MLQO01	60	2048	1902	10/26/16	4/5/17	Scaffold	UW	SAMN05912803	GCA_001854465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/465/GCA_001854465.1_ASM185446v1	-	AB1
Streptococcus lutetiensis 033	1076934	PRJNA72209	72209	Terrabacteria group	Firmicutes	1.97555	37.7	chromosome:NC_021900.1/CP003025.1	-	1	1999	1762	7/26/13	4/8/17	Complete Genome	Chinese Center for Disease Control and Prevention	SAMN02603123	GCA_000441535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/535/GCA_000441535.1_ASM44153v1	23782707	33
Enterococcus faecalis str. Symbioflor 1	1261557	PRJEB648	182916	Terrabacteria group	Firmicutes	2.81067	37.7	chromosome:NC_019770.1/HF558530.1	-	1	2885	2733	12/3/12	9/18/17	Complete Genome	JLU	SAMEA2272087	GCA_000317915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/915/GCA_000317915.1_ASM31791v1	-	Symbioflor 1
Streptococcus intermedius JTH08	591365	PRJDA33443	33443	Terrabacteria group	Firmicutes	1.93361	37.7	chromosome:NC_018073.1/AP010969.1	-	1	1926	1787	6/16/12	3/30/17	Complete Genome	Juntendo University School of Medicine	SAMD00060960	GCA_000306805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/805/GCA_000306805.1_ASM30680v1	-	JTH08
Streptococcus suis 14636	1214183	PRJNA171415	171415	Terrabacteria group	Firmicutes	2.07957	41.2	-	ALKV01	40	2068	1927	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02470635	GCA_000440335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/335/GCA_000440335.1_version1	-	14636
Pseudomonas syringae pv. papulans	83963	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	6.09747	58.9	-	LJRB01	298	5701	5223	10/20/15	3/27/17	Scaffold	University of Toronto	SAMN03976275	GCA_001401005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/005/GCA_001401005.1_PppICMP4048	-	ICMP4048
Vibrio vulnificus	672	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.95055	46.8	-	LOSI01	2	4604	4313	12/21/15	4/4/17	Contig	US Food and Drug Administration 	SAMN03996331	GCA_001471305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/305/GCA_001471305.1_ASM147130v1	-	ATCC 43382
Bacillus licheniformis	1402	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.1321	46.1	-	NPCQ01	69	4271	4141	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372719	GCA_002271485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/485/GCA_002271485.1_assembly-7708_v1	-	7708
Rummeliibacillus stabekisii	241244	PRJNA304612	304612	Terrabacteria group	Firmicutes	3.42074	37.6939	chromosome:NZ_CP014806.1/CP014806.1; plasmid pPP9:NZ_CP014807.1/CP014807.1	-	2	3479	3271	4/8/16	4/17/17	Complete Genome	Universidade Federal do Rio de Janeiro	SAMN04305282	GCA_001617605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/605/GCA_001617605.1_ASM161760v1	27231360	PP9
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.69364	50.8	-	CXJP01	402	5258	4501	7/16/15	2/24/17	Contig	SC	SAMEA2003433	GCA_001254415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/415/GCA_001254415.1_8290_4_15	-	95522
Bacteroides fragilis str. 3397 N2	1339300	PRJNA206143	206143	FCB group	Bacteroidetes/Chlorobi group	5.11715	43.3	-	JGDN01	93	4579	4273	3/20/14	4/18/17	Contig	IGS	SAMN02314521	GCA_000598565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/565/GCA_000598565.1_ASM59856v1	-	3397 N2
Lactobacillus reuteri	1598	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.28085	38.4	-	NFHN01	119	2358	2117	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473750	GCA_002159305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/159/305/GCA_002159305.1_ASM215930v1	-	An71
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.37363	66.9	-	MUJQ01	17	7854	7425	2/3/17	3/29/17	Contig	University of British Columbia	SAMN05001970	GCA_001984375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/375/GCA_001984375.1_ASM198437v1	-	VC1255
Enterococcus faecium	1352	PRJNA295268	295268	Terrabacteria group	Firmicutes	3.16841	37.6905	chromosome:NZ_CP014529.1/CP014529.1; plasmid pl1:NZ_CP014530.1/CP014530.1; plasmid pl2:NZ_CP014531.1/CP014531.1; plasmid pl3:NZ_CP014532.1/CP014532.1; plasmid pl4:NZ_CP014533.1/CP014533.1; plasmid pl5:NZ_CP014534.1/CP014534.1; plasmid pl6:NZ_CP014535.1/CP014535.1	-	7	3279	3037	10/3/16	3/28/17	Complete Genome	UMC Utrecht	SAMN04045274	GCA_001750885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/885/GCA_001750885.1_ASM175088v1	-	E745
Leuconostoc mesenteroides subsp. mesenteroides J18	1107880	PRJNA75083	75083	Terrabacteria group	Firmicutes	2.01726	37.6784	chromosome:NC_016805.3/CP003101.3; plasmid pKLE01:NC_016827.2/CP003102.2; plasmid pKLE02:NC_016820.2/CP003103.2; plasmid pKLE03:NC_016821.2/CP003104.2; plasmid pKLE04:NC_016828.2/CP003105.2	-	5	2012	1884	11/10/11	4/4/17	Complete Genome	Chung-Ang University	SAMN02603136	GCA_000234825.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/825/GCA_000234825.3_ASM23482v3	22247530	J18
Bacillus pumilus	1408	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.51412	41.2	-	DGAA01	32	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457339	GCA_002382215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/215/GCA_002382215.1_ASM238221v1	28894102	-
Burkholderia mallei	13373	PRJNA244039	244039	Proteobacteria	Betaproteobacteria	5.43545	68.5	-	JNOV01	2	5813	5391	9/4/15	4/4/17	Scaffold	Los Alamos National Laboratory	SAMN02837660	GCA_001279265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/265/GCA_001279265.1_BIC_1	26744368	Turkey10
Enterococcus faecium	1352	PRJNA292786	292786	Terrabacteria group	Firmicutes	3.25929	37.6727	chromosome:NZ_CP012430.1/CP012430.1; plasmid ISMMS_VRE_p1:NZ_CP012432.1/CP012432.1; plasmid ISMMS_VRE_p2:NZ_CP012431.1/CP012431.1; plasmid ISMMS_VRE_p3:NZ_CP012435.1/CP012435.1; plasmid ISMMS_VRE_p4:NZ_CP012434.1/CP012434.1; plasmid ISMMS_VRE_p5:NZ_CP012433.1/CP012433.1	-	6	3384	3104	9/7/16	4/17/17	Complete Genome	Mount Sinai School of Medicine	SAMN03988632	GCA_001720945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/945/GCA_001720945.1_ASM172094v1	28301471	ISMMS_VRE_1
Ralstonia solanacearum	305	PRJNA378704	378704	Proteobacteria	Betaproteobacteria	5.19244	66.8	-	MZNA01	129	4607	4391	3/16/17	3/18/17	Scaffold	NCDC Lugar Center	SAMN06560053	GCA_002029895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/895/GCA_002029895.1_ASM202989v1	-	GEO_96
Vibrio cholerae AM-19226	404974	PRJNA17723	17723	Proteobacteria	Gammaproteobacteria	4.05313	47.6	-	AATY02	33	3933	3708	9/28/06	3/26/17	Scaffold	TIGR	SAMN02435859	GCA_000153785.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/785/GCA_000153785.3_ASM15378v3	-	AM-19226
Clostridioides difficile T11	1215068	PRJEB198	222743	Terrabacteria group	Firmicutes	4.18563	28.3	-	CAML01	409	3947	3766	10/14/13	3/16/17	Scaffold	LPBA	SAMEA3138903	GCA_000531255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/255/GCA_000531255.1_T11	24482682	T11
Streptococcus salivarius	1304	PRJNA320256	320256	Terrabacteria group	Firmicutes	2.18552	39.9	-	LXZU01	3	2066	1945	6/4/16	4/5/17	Scaffold	State University of Campinas	SAMN04931570	GCA_001657895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/895/GCA_001657895.1_ASM165789v1	-	2202 S3
Shigella boydii	621	PRJNA293193	293193	Proteobacteria	Gammaproteobacteria	4.36149	50.7	-	LSCP01	404	5003	4154	12/15/16	2/26/17	Contig	"University of Maryland, School of Medicine"	SAMN04001709	GCA_001906385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/385/GCA_001906385.1_ASM190638v1	-	100705
Francisella tularensis subsp. tularensis FSC033	430557	PRJNA19017	19017	Proteobacteria	Gammaproteobacteria	1.85168	32.2	-	AAYE01	8	1887	1614	5/14/07	3/30/17	Scaffold	Broad Institute	SAMN02595216	GCA_000154165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/165/GCA_000154165.1_ASM15416v1	-	FSC033
Brucella abortus NCTC 8038	575591	PRJNA34743	34743	Proteobacteria	Alphaproteobacteria	3.27687	57.2	-	ACJJ01	16	3348	3130	9/18/09	3/22/17	Scaffold	Broad Institute	SAMN02595309	GCA_000160255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/255/GCA_000160255.1_ASM16025v1	25212613	NCTC 8038
Yersinia pseudotuberculosis	633	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.95581	47.1	-	CPXB01	121	4614	4300	3/23/15	4/3/17	Scaffold	SC	SAMEA859890	GCA_001172325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/325/GCA_001172325.1_5139_3_2	-	IP32463
Lactobacillus delbrueckii subsp. lactis	29397	PRJNA356187	356187	Terrabacteria group	Firmicutes	2.4285	48.9	-	MRBF01	5	2496	2039	3/3/17	3/6/17	Contig	Korea University	SAMN06109027	GCA_002016675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/675/GCA_002016675.1_ASM201667v1	-	KCTC 3034
Xanthomonas citri pv. malvacearum X20	1220028	PRJNA172045	172045	Proteobacteria	Gammaproteobacteria	5.2177	64.4656	chromosome:NZ_CM002029.1/CM002029.1; plasmid unnamed1:NZ_CM002030.1/CM002030.1; plasmid unnamed2:NZ_CM002031.1/CM002031.1	ATMB01	4	4711	4212	7/25/13	4/11/17	Chromosome	French Network on Xanthomonads	SAMN02469930	GCA_000454525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/525/GCA_000454525.1_20120625	23990578	X20
Campylobacter fetus subsp. fetus BT 10/98	1273268	PRJNA183999	183999	Proteobacteria	delta/epsilon subdivisions	1.74991	33.2	-	LRAL01	43	1786	1635	8/5/16	4/5/17	Contig	Utrecht University	SAMN04417251	GCA_001699575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/575/GCA_001699575.1_ASM169957v1	27333878	BT 10/98
Xanthomonas oryzae pv. oryzae	64187	PRJNA269393	269393	Proteobacteria	Gammaproteobacteria	4.31622	63.9	-	JXDP01	455	4267	3458	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252492	GCA_001927415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/415/GCA_001927415.1_ASM192741v1	-	BXO8
Oenococcus oeni IOEB_L65_2	1428430	PRJNA229557	229557	Terrabacteria group	Firmicutes	1.77657	37.8	-	AZLR01	39	1812	1643	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02904300	GCA_000761945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/945/GCA_000761945.1_Oeoe_IOEB_L65_2_1.0	24901216	IOEB_L65_2
Streptococcus mitis	28037	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.97415	39.8	-	NCVE01	29	2032	1873	4/18/17	4/21/17	Contig	Slagelse Hospital	SAMN06705604	GCA_002096775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/775/GCA_002096775.1_ASM209677v1	27325438	RH_50738_11
Vibrio parahaemolyticus VPTS-2009	1238221	PRJNA176656	176656	Proteobacteria	Gammaproteobacteria	5.07862	45.3	-	JDFM01	82	4871	4712	3/4/14	3/18/17	Scaffold	IGS	SAMN01923895	GCA_000593325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/325/GCA_000593325.2_vpVPTS2009	-	VPTS-2009
Enterococcus faecium	1352	PRJNA292801	292801	Terrabacteria group	Firmicutes	3.22135	37.6589	chromosome:NZ_CP012460.1/CP012460.1; plasmid ISMMS_VRE7_p1:NZ_CP012461.1/CP012461.1; plasmid ISMMS_VRE7_p2:NZ_CP012462.1/CP012462.1; plasmid ISMMS_VRE7_p3:NZ_CP012463.1/CP012463.1; plasmid ISMMS_VRE7_p4:NZ_CP012464.1/CP012464.1	-	5	3350	3076	9/7/16	4/17/17	Complete Genome	Mount Sinai School of Medicine	SAMN03988624	GCA_001721065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/065/GCA_001721065.1_ASM172106v1	28301471	ISMMS_VRE_7
Lactobacillus casei	1582	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.85609	46.5	-	JVUB01	170	2974	2688	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197293	GCA_001062665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/665/GCA_001062665.1_ASM106266v1	26230489	1316.rep1_LPAR
Salinispora arenicola CNH905	1137251	PRJNA169774	169774	Terrabacteria group	Actinobacteria	5.66703	69.5	-	AZXB01	105	5153	4775	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597258	GCA_000515035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/035/GCA_000515035.1_ASM51503v1	-	CNH905
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293	203120	PRJNA315	315	Terrabacteria group	Firmicutes	2.07576	37.6586	chromosome:NC_008531.1/CP000414.1; plasmid pLEUM1:NC_008496.1/CP000415.1	-	2	2089	1960	10/13/06	3/29/17	Complete Genome	"US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc."	SAMN02598482	GCA_000014445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/445/GCA_000014445.1_ASM1444v1	17030793	ATCC 8293
Clostridium botulinum	1491	PRJNA290143	290143	Terrabacteria group	Firmicutes	3.17471	27.9	-	LHYY01	101	3062	2904	8/12/15	3/26/17	Scaffold	Anses	SAMN03876608	GCA_001266905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/905/GCA_001266905.1_ASM126690v1	26430029	51714-DC
Borrelia burgdorferi IPT19	1408858	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.18553	28.4	-	AYBH01	368	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378825	GCA_000501935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/935/GCA_000501935.1_BorBurgIPT19	-	IPT19
Treponema pallidum subsp. pallidum	161	PRJNA322283	322283	Spirochaetes	Spirochaetia	1.13916	52.8	chromosome:NZ_CP016066.1/CP016066.1	-	1	1064	1001	8/25/16	4/5/17	Chromosome	"National Institute of Health, Portugal"	SAMN05150675	GCA_001713275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/275/GCA_001713275.1_ASM171327v1	-	PT_SIF1278
Rhizobium leguminosarum bv. viciae	387	PRJNA354725	354725	Proteobacteria	Alphaproteobacteria	7.2394	60.8	-	MPZP01	133	7047	6718	12/31/16	4/6/17	Scaffold	ARRIAM	SAMN06050875	GCA_001927265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/265/GCA_001927265.1_ASM192726v1	28053873	RCAM 1026
Brucella suis S2-30	1210453	PRJNA170711	170711	Proteobacteria	Alphaproteobacteria	3.27002	57.2	-	ALOS01	86	3327	3117	8/20/12	3/30/17	Contig	Beijing Institute of Disease Control and Prevention	SAMN02469344	GCA_000292125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/125/GCA_000292125.1_ASM29212v1	23045513	S2-30
Enterococcus faecalis TX2141	749492	PRJNA47131	47131	Terrabacteria group	Firmicutes	2.90311	37.4	-	AECG01	77	3024	2862	9/8/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189129	GCA_000148165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/165/GCA_000148165.1_ASM14816v1	-	TX2141
Borrelia garinii IPT129	1408850	PRJNA223339	223339	Spirochaetes	Spirochaetia	0.947395	28.4	-	AYAZ01	525	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378817	GCA_000501875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/875/GCA_000501875.1_BorGarIPT129	-	IPT129
Streptococcus mutans TCI-210	1074156	PRJNA72055	72055	Terrabacteria group	Firmicutes	1.80935	37	-	AGLL01	135	1841	1722	10/6/11	3/22/17	Contig	JCVI	SAMN02436451	GCA_000229405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/405/GCA_000229405.2_SMUT6-NEX_5-210	-	TCI-210
Neisseria gonorrhoeae SK22871	1352518	PRJNA209351	209351	Proteobacteria	Betaproteobacteria	2.16393	52.4	-	ATPR01	441	2560	2148	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02338794	GCA_001025525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/525/GCA_001025525.1_ASM102552v1	-	SK22871
"Enterococcus faecium 1,141,733"	565659	PRJNA32959	32959	Terrabacteria group	Firmicutes	2.92414	38.3	-	ACAZ01	25	2886	2729	5/20/09	3/22/17	Scaffold	Broad Institute	SAMN02595270	GCA_000157575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/575/GCA_000157575.1_ASM15757v1	-	"1,141,733"
Chlamydia psittaci	83554	PRJNA244792	244792	PVC group	Chlamydiae	1.17842	39	-	JMBZ01	59	1049	985	5/9/14	4/2/17	Scaffold	BGI	SAMN02729061	GCA_000687395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/395/GCA_000687395.1_PsittaciChina1.0_for_CB7	24903864	CB7
Bacillus amyloliquefaciens	1390	PRJNA308161	308161	Terrabacteria group	Firmicutes	3.88665	46.5	-	LQQW01	43	3841	3674	4/13/16	4/5/17	Contig	University of Malaya	SAMN04387725	GCA_001619745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/745/GCA_001619745.1_ASM161974v1	-	M49
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.09271	65.8	-	JUPM01	484	4814	4589	7/10/15	3/26/17	Contig	University of Washington	SAMN03198088	GCA_001074785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/785/GCA_001074785.1_ASM107478v1	26230489	882_SMAL
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.11961	41.2	-	CWCO01	77	2042	1870	6/24/15	3/26/17	Contig	SC	SAMEA1032788	GCA_001175605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/605/GCA_001175605.1_6903_6_13	-	EQUI0158
Pasteurella multocida subsp. multocida	44283	PRJNA244054	244054	Proteobacteria	Gammaproteobacteria	2.36884	40.3	-	JPHI01	71	2252	2167	6/15/15	4/3/17	Contig	Murdoch University	SAMN02721467	GCA_001028245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/245/GCA_001028245.1_ASM102824v1	26151935	Karachi
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.81445	46.6	-	JUIK01	735	3006	2353	7/1/15	4/10/17	Contig	Wageningen University	SAMN03196656	GCA_001043995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/995/GCA_001043995.1_ASM104399v1	26048937	Lr073
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31353	57.2358	chromosome 1:NZ_CP018538.1/CP018538.1; chromosome 2:NZ_CP018539.1/CP018539.1	-	2	3373	3149	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932989	GCA_002191595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/595/GCA_002191595.1_ASM219159v1	28388689	BwIM_TUR_02
Leuconostoc mesenteroides subsp. jonggajibkimchii	2026657	PRJNA299366	299366	Terrabacteria group	Firmicutes	1.98392	37.6424	chromosome:NZ_CP014611.1/CP014611.1; plasmid pDRC1:NZ_CP014612.1/CP014612.1; plasmid pDRC2:NZ_CP014613.1/CP014613.1; plasmid pDRC3:NZ_CP014614.1/CP014614.1	-	4	1990	1770	11/28/16	4/5/17	Complete Genome	Chung-Ang University	SAMN04198570	GCA_001886915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/915/GCA_001886915.1_ASM188691v1	-	DRC1506
Bordetella bronchiseptica D993	1458260	PRJNA237085	237085	Proteobacteria	Betaproteobacteria	5.27954	68.2	-	JGWV01	200	5195	4738	5/12/14	4/4/17	Contig	JCVI	SAMN02614578	GCA_000690195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/195/GCA_000690195.2_gbb63v01	25908122	D993
Sinorhizobium meliloti AK11	1194715	PRJNA167597	167597	Proteobacteria	Alphaproteobacteria	6.84394	62	-	AKZV01	424	6904	5782	8/13/12	5/19/17	Scaffold	University of Florence	SAMN02471751	GCA_000287535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/535/GCA_000287535.1_SMAK11_v1	23431003	AK11
Corynebacterium diphtheriae	1717	PRJNA341832	341832	Terrabacteria group	Actinobacteria	2.4662	53.6	-	MIOF01	75	2442	2229	11/10/16	8/24/17	Contig	National Institute for Communicable Diseases	SAMN05729421	GCA_001876055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/055/GCA_001876055.1_ASM187605v1	28726616	ST378-KZN-2015-45238
Enterococcus faecium	1352	PRJNA358851	358851	Terrabacteria group	Firmicutes	3.23847	37.6168	chromosome:NZ_CP019988.1/CP019988.1; plasmid p63-1:NZ_CP019989.1/CP019989.1; plasmid p63-2:NZ_CP019990.1/CP019990.1; plasmid p63-3:NZ_CP019991.1/CP019991.1	-	4	3335	3074	3/13/17	3/15/17	Complete Genome	Asia Pacific Foundation for Infectious Diseases (APFID)	SAMN06472829	GCA_002025065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/065/GCA_002025065.1_ASM202506v1	-	-
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.38811	47.2	-	CQCF01	88	4059	3835	3/23/15	3/26/17	Contig	SC	SAMEA980207	GCA_001168925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/925/GCA_001168925.1_5116_3_7	-	SZ506/04
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.09415	41.6	-	JJPQ01	186	3526	3330	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708950	GCA_000979735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/735/GCA_000979735.1_gtlEnvA5udCFS	25756680	3.H.A.2.5
Leuconostoc mesenteroides subsp. mesenteroides	33967	PRJNA352459	352459	Terrabacteria group	Firmicutes	2.2776	37.5	-	MPLO01	70	2309	2144	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981503	GCA_002092735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/735/GCA_002092735.1_ASM209273v1	28217118	LN25
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.16136	39.9	-	FPMB01	4	1056	955	5/10/17	5/24/17	Scaffold	WTSI	SAMEA1094359	GCA_900118875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/875/GCA_900118875.1_7067_6_47	-	C18_98
Serratia marcescens	615	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.13313	59.6	-	LFBS01	12	4878	4727	6/19/15	3/26/17	Scaffold	Broad Institute	SAMN03280433	GCA_001034395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/395/GCA_001034395.1_Serr_marc_UCI87_V1	-	UCI87
Enterococcus faecium	1352	PRJNA308959	308959	Terrabacteria group	Firmicutes	3.39785	37.6039	chromosome:NZ_CP013994.1/CP013994.1; plasmid unnamed1:NZ_CP013995.1/CP013995.1; plasmid unnamed2:NZ_CP013996.1/CP013996.1	-	3	3558	3294	1/20/16	3/27/17	Complete Genome	University of Minnesota	SAMN04418075	GCA_001518735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/735/GCA_001518735.1_ASM151873v1	-	6.00E+06
Mannheimia haemolytica	75985	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.59405	40.9	-	LQEJ01	92	2667	2512	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366531	GCA_001929665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/665/GCA_001929665.1_ASM192966v1	-	2543MH
Campylobacter coli 86119	887289	PRJNA52715	52715	Proteobacteria	delta/epsilon subdivisions	1.73698	31.3	-	AIMU01	120	1828	1751	3/16/12	3/15/17	Contig	Cornell University	SAMN02428969	GCA_000253655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/655/GCA_000253655.2_ASM25365v2	-	86119
Burkholderia sp. MR1	870478	PRJNA269162	269162	Proteobacteria	Betaproteobacteria	6.01967	63.3	-	JWHM01	58	5578	5410	1/15/15	4/17/17	Contig	Oak Ridge National Lab	SAMN03252282	GCA_000818655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/655/GCA_000818655.1_Burkholderia_sp_MR1_v1.0	26044439	MR1
Enterococcus faecium	1352	PRJEB13012	326233	Terrabacteria group	Firmicutes	3.31203	37.6036	chromosome 1:LT603678.1; plasmid 2:LT603679.1; plasmid 3:LT603680.1; plasmid 4:LT603681.1; plasmid 5:LT603682.1	-	5	-	-	7/28/16	7/28/16	Complete Genome	UNIVERSITY OF MELBOURNE	SAMEA4357170	GCA_900094185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/185/GCA_900094185.1_Ef_DMG1500501	-	-
Propionibacterium acnes HL050PA2	765101	PRJNA49237	49237	Terrabacteria group	Actinobacteria	2.46137	60	-	ADYC01	13	2457	2235	7/30/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189223	GCA_000144465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/465/GCA_000144465.1_ASM14446v1	-	HL050PA2
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.45228	32.7	-	CUHG01	68	2431	2294	3/31/15	3/26/17	Contig	SC	SAMEA1035105	GCA_001230145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/145/GCA_001230145.1_7068_7_64	-	137133
Proteus mirabilis	584	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	3.92335	37.8	-	NEYX01	30	3601	3467	6/9/17	6/12/17	Contig	JCVI	SAMN06812618	GCA_002184635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/635/GCA_002184635.1_ASM218463v1	-	ARLG-2970
Enterobacter cloacae UCI 24	1400147	PRJNA219274	219274	Proteobacteria	Gammaproteobacteria	4.7738	55	-	JCKW01	1	4648	4414	2/3/14	4/10/17	Scaffold	Broad Institute	SAMN02356604	GCA_000534275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/275/GCA_000534275.1_Ente_cloa_UCI_24_V1	-	UCI 24
Cronobacter sakazakii	28141	PRJNA251868	251868	Proteobacteria	Gammaproteobacteria	4.53851	56.9	-	JOLV01	104	4432	4193	10/9/15	4/4/17	Contig	"Nottingham Trent University, UK"	SAMN02840976	GCA_001309295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/295/GCA_001309295.1_ASM130929v1	26438044	692
Lactobacillus salivarius cp400	1273133	PRJEB1226	189728	Terrabacteria group	Firmicutes	2.15684	32.9	-	CBVR01	89	2228	1958	12/12/13	4/3/17	Scaffold	TGAC	SAMEA3138854	GCA_000529385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/385/GCA_000529385.1_Lsalivarius_cp400	24526652	-
Moraxella catarrhalis	480	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.99313	41.6	-	JVRZ01	45	1870	1724	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197347	GCA_001062845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/845/GCA_001062845.1_ASM106284v1	26230489	157.rep1_MCAT
Mycobacterium abscessus 3A-0930-R	1001720	PRJNA65169	65169	Terrabacteria group	Actinobacteria	5.27353	64.1	-	AKVB01	13	5362	5253	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00728496	GCA_000270565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/565/GCA_000270565.1_ASM27056v1	-	3A-0930-R
Bifidobacterium breve	1685	PRJNA379831	379831	Terrabacteria group	Actinobacteria	2.41898	59.1	-	NAQG01	38	2226	1972	3/31/17	4/6/17	Contig	University of Parma	SAMN06621711	GCA_002076055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/055/GCA_002076055.1_Bbif1891B	-	1891B
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.19858	36.7	-	LPSJ01	8	2338	2230	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305170	GCA_001560605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/605/GCA_001560605.1_NG05B_CO5_03	-	NG05B_CO5_03
Vibrio sp. OULL4	1904360	PRJNA343875	343875	Proteobacteria	Gammaproteobacteria	4.14664	45.4	-	MQVJ01	59	3968	3817	2/16/17	4/17/17	Contig	University of Malaya	SAMN06011220	GCA_002002405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/405/GCA_002002405.1_ASM200240v1	-	OULL4
Staphylococcus saprophyticus	29385	PRJEB4141	221830	Terrabacteria group	Firmicutes	2.71143	33.3	-	FMPI01	81	2694	2529	9/30/16	4/5/17	Scaffold	SC	SAMEA2297796	GCA_900097975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/975/GCA_900097975.1_12075_1_89	-	82C
Aeromonas hydrophila	644	PRJNA321182	321182	Proteobacteria	Gammaproteobacteria	4.88294	61.0967	plasmid pAH9804:NZ_CM004592.1/CM004592.1	LYZG01	46	4602	4391	8/17/16	4/5/17	Contig	Mississippi State University	SAMN04967900	GCA_001705915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/915/GCA_001705915.1_ASM170591v1	-	MN98-04
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.45162	67.4	-	LOYA01	91	6788	6441	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449283	GCA_001524685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/685/GCA_001524685.1_ASM152468v1	-	MSMB2044
Flavobacterium psychrophilum	96345	PRJEB21067	396411	FCB group	Bacteroidetes/Chlorobi group	2.52043	32.5	-	FYCV01	205	2286	2209	7/29/17	8/7/17	Contig	INRA	SAMEA104125757	GCA_900186495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/495/GCA_900186495.1_KU060626-59_V1	-	KU 060626-59
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.73972	47.6	-	MEAA01	72	3451	3273	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320401	GCA_001883345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/345/GCA_001883345.1_ASM188334v1	-	97/0226-1 vc
Pectobacterium carotovorum subsp. carotovorum	555	PRJNA269235	269235	Proteobacteria	Gammaproteobacteria	4.75602	52	-	JUJR01	12	4344	4181	12/29/14	4/2/17	Scaffold	Beijing Academy of Agriculture and Forestry Sciences	SAMN03252619	GCA_000808495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/495/GCA_000808495.1_ASM80849v1	-	BC T2
Lactobacillus crispatus	47770	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.03977	36.8	-	LYRH01	76	2088	1882	7/14/17	7/17/17	Scaffold	University of Minnesota	SAMN04498990	GCA_002218945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/945/GCA_002218945.1_ASM221894v1	-	UMNLC18
Gardnerella vaginalis 6119V5	698961	PRJNA42455	42455	Terrabacteria group	Actinobacteria	1.4996	43.3	-	ADEW01	12	1203	1128	5/21/12	3/30/17	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393784	GCA_000263655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/655/GCA_000263655.1_ASM26365v1	-	6119V5
Lactobacillus paracasei NRIC 1981	1435040	PRJDB1561	277564	Terrabacteria group	Firmicutes	3.18977	46.2	-	BAYO01	527	3336	2998	3/12/15	4/3/17	Contig	Tokyo University of Agriculture	SAMD00000558	GCA_000958485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/485/GCA_000958485.1_ASM95848v1	25931593	NRIC1981
Staphylococcus hominis	1290	PRJEB10524	374818	Terrabacteria group	Firmicutes	2.23584	31.2	-	FBVH01	45	2213	2095	2/12/17	2/23/17	Scaffold	UNIVERSITY OF LIVERPOOL	SAMEA3515755	GCA_900006865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/006/865/GCA_900006865.1_S.hominis_J6	-	-
Streptococcus oralis	1303	PRJNA280673	280673	Terrabacteria group	Firmicutes	1.98969	41	-	LAYF01	74	1965	1846	3/11/16	4/10/17	Contig	University of Malaya	SAMN03480681	GCA_001588645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/645/GCA_001588645.1_ASM158864v1	-	JPIIBV3
Acinetobacter nosocomialis	106654	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.63224	38.5	-	DBFT01	168	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455327	GCA_002295745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/745/GCA_002295745.1_ASM229574v1	28894102	-
Klebsiella variicola	244366	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.61278	57.3	-	JUTF01	104	5531	5304	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197991	GCA_001066265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/265/GCA_001066265.1_ASM106626v1	26230489	780_KPNE
Pseudoalteromonas sp. BMB	1874619	PRJNA329295	329295	Proteobacteria	Gammaproteobacteria	5.386	43.3	-	MBQA01	237	4655	4475	8/23/16	4/13/17	Contig	Auburn University	SAMN05408344	GCA_001709235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/235/GCA_001709235.1_ASM170923v1	-	BMB
Taylorella equigenitalis	29575	PRJNA385665	385665	Proteobacteria	Betaproteobacteria	1.64994	37.6	chromosome:NZ_CP021199.1/CP021199.1	-	1	1518	1446	9/8/17	9/11/17	Complete Genome	USDA APHIS VS NVSL	SAMN06899385	GCA_002288125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/125/GCA_002288125.1_ASM228812v1	-	89-0490
Enterobacter asburiae	61645	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.91422	55.5	-	JWCF01	156	4815	4632	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197081	GCA_001052145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/145/GCA_001052145.1_ASM105214v1	26230489	1126_ECLO
Pseudomonas amygdali pv. tabaci str. ATCC 11528	573066	PRJNA282426	282426	Proteobacteria	Gammaproteobacteria	6.12908	58.1	-	LCWS01	18	5685	5388	5/13/15	4/3/17	Scaffold	KRIBB	SAMN03610501	GCA_001006455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/455/GCA_001006455.1_PSt_v01	26089433	ATCC 11528
Acinetobacter pittii	48296	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.5715	39	-	LLIO01	493	3458	3311	10/27/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145759	GCA_001416335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/335/GCA_001416335.1_ASM141633v1	-	ABBL148
Leptospira santarosai str. CBC1416	1193059	PRJNA167256	167256	Spirochaetes	Spirochaetia	3.97485	42	-	AKWE02	191	4263	4221	10/17/12	11/19/13	Contig	J. Craig Venter Institute	SAMN01036871	GCA_000306615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/615/GCA_000306615.2_gls454161v02	-	CBC1416
Citrobacter freundii	546	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.25845	51.8	-	JTBV01	1	5076	4770	11/14/14	7/6/17	Contig	US Food and Drug Administration 	SAMN02934510	GCA_000783995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/995/GCA_000783995.1_ASM78399v1	-	FDAARGOS_61
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.7453	55.5	-	LAAN01	47	4591	4412	3/19/15	3/25/17	Contig	JCVI	SAMN03283633	GCA_000956805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/805/GCA_000956805.1_ASM95680v1	-	34980
Kingella kingae KK101	1305590	PRJEB1613	194484	Proteobacteria	Betaproteobacteria	1.99137	46.7	-	CBRN01	1	1999	1709	8/27/13	4/2/17	Scaffold	URMITE	SAMEA2272086	GCA_000477375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/375/GCA_000477375.1_G97	-	KK101
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.40956	54.9	-	LDBD01	64	5342	5090	5/21/15	4/6/17	Contig	JCVI	SAMN03495939	GCA_001011195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/195/GCA_001011195.1_ASM101119v1	-	GN02286
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.94271	64.1	-	FWDA01	21	4910	4762	3/16/17	3/24/17	Contig	SC	SAMEA2071553	GCA_900134755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/755/GCA_900134755.1_10208_3_17	-	442
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.44901	66.9	-	LOYF01	83	7833	7457	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449288	GCA_001524765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/765/GCA_001524765.1_ASM152476v1	-	MSMB1224
Streptococcus sobrinus TCI-160	1074133	PRJNA72015	72015	Terrabacteria group	Firmicutes	2.08181	43.5	-	AGHP01	351	2121	1858	10/6/11	3/30/17	Contig	JCVI	SAMN02436458	GCA_000228585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/585/GCA_000228585.2_SMUT5-NEX_2-160	-	TCI-160
Mycobacterium chelonae	1774	PRJNA323571	323571	Terrabacteria group	Actinobacteria	5.21155	64.1	-	MAFH01	40	5239	5069	3/3/17	3/6/17	Contig	LNCC	SAMN05186788	GCA_002013855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/855/GCA_002013855.1_ASM201385v1	-	D16R7
Leclercia adecarboxylata	83655	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.6501	55.7	-	DFOJ01	28	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451055	GCA_002381145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/145/GCA_002381145.1_ASM238114v1	28894102	-
Elizabethkingia anophelis	1117645	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	3.9599	35.6	-	LNOG01	25	3653	3559	1/21/16	3/22/17	Scaffold	CDC	SAMN04254539	GCA_001521815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/815/GCA_001521815.1_ASM152181v1	26966213	422
Pseudomonas sp. URIL14HWK12:I4	1283282	PRJNA186457	186457	Proteobacteria	Gammaproteobacteria	5.81701	62	-	AXXQ01	29	5447	5253	10/25/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440729	GCA_000483105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/105/GCA_000483105.1_ASM48310v1	-	URIL14HWK12:I4
Streptomyces sp. ScaeMP-e10	1156841	PRJNA169733	169733	Terrabacteria group	Actinobacteria	8.07558	71.6	-	ARDV01	20	7173	6873	4/19/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02441715	GCA_000373405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/405/GCA_000373405.1_ASM37340v1	-	ScaeMP-e10
Paeniclostridium sordellii	1505	PRJEB8133	277658	Terrabacteria group	Firmicutes	3.59883	27.5	-	CENA01	80	3483	3352	3/13/15	4/4/17	Scaffold	WTSI	SAMEA1572070	GCA_001372555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/555/GCA_001372555.1_W2946	-	W2946
Acinetobacter sp. NIPH 3623	1217698	PRJNA183226	183226	Proteobacteria	Gammaproteobacteria	3.99249	42.8	-	APSA01	2	3712	3555	4/16/13	4/6/17	Scaffold	Broad Institute	SAMN01087862	GCA_000369785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/785/GCA_000369785.1_Acin_sp_NIPH_3623_V1	-	NIPH 3623
Flavobacterium sp. MS220-5C	926447	PRJNA60085	60085	FCB group	Bacteroidetes/Chlorobi group	0.71137	39.4	-	AOTS01	22	-	-	2/21/13	7/23/13	Scaffold	JGI	SAMN02261264	GCA_000341755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/755/GCA_000341755.1_ASM34175v1	-	MS220-5C
Klebsiella sp. NFIX26	1566172	PRJEB16987	351116	Proteobacteria	Gammaproteobacteria	5.28164	58.1	-	FOEW01	20	5221	4973	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159326	GCA_900110725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/725/GCA_900110725.1_IMG-taxon_2602042104_annotated_assembly	-	NFIX26
Bacillus sp. 171095_106	1286363	PRJNA187092	187092	Terrabacteria group	Firmicutes	5.19318	38	-	AZVK01	22	5347	5134	1/3/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02597215	GCA_000514175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/175/GCA_000514175.1_ASM51417v1	-	171095_106
Clostridium sp. KNHs205	1449050	PRJNA234887	234887	Terrabacteria group	Firmicutes	6.36098	39	-	JNLE01	6	5345	5181	6/11/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02841229	GCA_000702945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/945/GCA_000702945.1_ASM70294v1	-	KNHs205
Sphingomonas sp. RIT328	1470591	PRJNA239292	239292	Proteobacteria	Alphaproteobacteria	4.34351	68.3	-	JFYV01	56	4011	3870	4/14/14	4/9/17	Contig	Monash University Malaysia	SAMN02676630	GCA_000632225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/225/GCA_000632225.1_Willow_Endophyte_RIT328	24812212	RIT328
Synechococcus sp. OG1	1938863	PRJEB20449	382923	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.43394	49.2	-	FXBO01	6	3277	3144	4/21/17	5/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06272755	GCA_900177365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/365/GCA_900177365.1_IMG-taxon_2708742537_annotated_assembly	-	OG1
Rhodococcus sp. EPR-134	1813675	PRJNA314738	314738	Terrabacteria group	Actinobacteria	6.9882	62.4	-	LVCT01	811	6928	6120	4/14/16	4/12/17	Contig	Zhejiang Wanli University	SAMN04514658	GCA_001647205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/205/GCA_001647205.1_ASM164720v1	-	EPR-134
Enterobacter sp. BWH63	1686387	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.26913	54.6	-	LETC01	15	5271	4983	6/19/15	4/10/17	Scaffold	Broad Institute	SAMN03280179	GCA_001037595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/595/GCA_001037595.1_Ente_cloa_complex_BWH63_V1	-	BWH63
Staphylococcus sp. HMSC075C08	1739274	PRJNA299924	299924	Terrabacteria group	Firmicutes	2.8142	32.7	-	LTHA01	76	2937	2779	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477586	GCA_001810905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/905/GCA_001810905.1_ASM181090v1	-	HMSC075C08
Corynebacterium sp. HMSC08F01	1581139	PRJNA269908	269908	Terrabacteria group	Actinobacteria	2.41349	61.6	-	LWNT01	74	2290	2168	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03434245	GCA_001807545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/545/GCA_001807545.1_ASM180754v1	-	HMSC08F01
Arthrobacter sp. B6	1570137	PRJNA306410	306410	Terrabacteria group	Actinobacteria	4.66344	64.7	-	LQAP01	8	4243	4064	6/16/16	4/13/17	Scaffold	 China University of Geosciences (Wuhan)	SAMN04349877	GCA_001663775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/775/GCA_001663775.1_ASM166377v1	-	B6
Bradyrhizobium sp. CCH5-A9	1768775	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	4.71363	67.7	-	LSJL01	295	4576	4349	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299462	GCA_001556725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/725/GCA_001556725.1_ASM155672v1	-	CCH5-A9
Streptococcus sp. HMSC075A03	1739266	PRJNA299916	299916	Terrabacteria group	Firmicutes	2.05233	35.3	-	LTHH01	35	2094	1999	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477580	GCA_001810765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/765/GCA_001810765.1_ASM181076v1	-	HMSC075A03
Mycobacterium sp. UM_11	1638773	PRJNA280198	280198	Terrabacteria group	Actinobacteria	5.21914	68.9	-	LATC01	308	5013	4682	10/26/15	4/11/17	Contig	Universiti Malaya	SAMN03458310	GCA_001414075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/075/GCA_001414075.1_ASM141407v1	-	UM_11
Prevotella sp. P4-98	2024219	PRJNA396820	396820	FCB group	Bacteroidetes/Chlorobi group	3.10787	45.7	-	NPJC01	91	2580	2441	8/14/17	8/16/17	Contig	University of Ljubljana	SAMN07431225	GCA_002251405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/405/GCA_002251405.1_ASM225140v1	-	P4-98
Enterococcus sp. GMD2E	1169666	PRJNA157403	157403	Terrabacteria group	Firmicutes	2.35146	38	-	AJQZ01	104	2424	2276	9/14/12	4/7/17	Contig	Los Alamos National Laboratory	SAMN02470272	GCA_000296895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/895/GCA_000296895.1_ASM29689v1	23493677	GMD2E
Methylobacterium sp. Leaf465	1736385	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	5.05548	69.4	-	LMRA01	48	4659	4433	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151775	GCA_001424705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/705/GCA_001424705.1_Leaf465	26633631	Leaf465
Nocardioides sp. REDSEA-S33_B3	1811554	PRJNA289734	289734	Terrabacteria group	Actinobacteria	3.55515	72.1	-	LUPK01	61	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534612	GCA_001627335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/335/GCA_001627335.1_ASM162733v1	27377622	-
Marinobacter sp. UBA3607	1946820	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.09926	58.9	-	DFLY01	38	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452015	GCA_002375525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/525/GCA_002375525.1_ASM237552v1	28894102	-
Acidovorax sp. 32-64-7	1970311	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	1.26144	64	-	NCDR01	160	1293	1130	8/16/17	8/16/17	Scaffold	None	SAMN06622367	GCA_002280295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/295/GCA_002280295.1_ASM228029v1	-	-
Psychrobacter sp. UBA4193	1947353	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.33676	43	-	DFUF01	220	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455646	GCA_002380345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/345/GCA_002380345.1_ASM238034v1	28894102	-
Paenibacillus sp. FSL R7-269	1226755	PRJNA173783	173783	Terrabacteria group	Firmicutes	7.59713	51.8	-	ASPS01	161	6814	6562	1/13/14	4/17/17	Contig	Cornell University	SAMN02597347	GCA_000517865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/865/GCA_000517865.1_ASM51786v1	24422886	FSL R7-269
Alcanivorax sp. UBA3585	1945983	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.47101	64.8	-	DFMU01	45	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452542	GCA_002375775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/775/GCA_002375775.1_ASM237577v1	28894102	-
Ruminococcus sp. Zagget7	1930001	PRJNA357304	357304	Terrabacteria group	Firmicutes	2.07651	47	-	MSHI01	115	-	-	1/10/17	1/10/17	Scaffold	University of Queensland	SAMN06140836	GCA_001941055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/055/GCA_001941055.1_ASM194105v1	-	-
Thioalkalivibrio sp. ALE10	748651	PRJNA183022	183022	Proteobacteria	Gammaproteobacteria	2.76603	67.7	-	ARLT01	21	2655	2537	4/23/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441655	GCA_000381385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/385/GCA_000381385.1_ASM38138v1	-	ALE10
Bacteroides sp. CAG:927	1262753	PRJEB1037	206691	FCB group	Bacteroidetes/Chlorobi group	2.54078	47.9	-	CAWM01	42	2275	2231	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138445	GCA_000431155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/155/GCA_000431155.1_MGS927	-	-
Prochlorococcus sp. scB241_526N9	1471443	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.27123	31.2	-	JFKT01	173	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671314	GCA_000634015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/015/GCA_000634015.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. BCW_6462	1903579	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.7628	30.4	-	MJXK01	45	1855	1686	10/4/16	4/13/17	Scaffold	University of California at Davis	SAMN03360171	GCA_001762755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/755/GCA_001762755.1_ASM176275v1	-	BCW_6462
Neisseria sp. HMSC056A03	1739544	PRJNA300195	300195	Proteobacteria	Betaproteobacteria	2.2471	49.3	-	LTSK01	103	2257	2090	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480460	GCA_001815685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/685/GCA_001815685.1_ASM181568v1	-	HMSC056A03
Rhizobium sp. IBUN	1042326	PRJNA80361	80361	Proteobacteria	Alphaproteobacteria	6.51592	59.8	-	AZNV01	101	6399	5970	12/17/13	4/17/17	Contig	JGI	SAMN02597175	GCA_000510625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/510/625/GCA_000510625.1_ASM51062v1	-	IBUN
Halomonas sp. JCM 19031	1460632	PRJDB1610	243811	Proteobacteria	Gammaproteobacteria	3.47495	56.8	-	BAWX01	158	-	-	10/1/15	10/1/15	Contig	"Microbe Division/JCM, RIKEN BioResource Center"	SAMD00000369	GCA_001310335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/335/GCA_001310335.1_ASM131033v1	-	JCM 19031
Chryseobacterium sp. RU33C	1907398	PRJEB18868	360725	FCB group	Bacteroidetes/Chlorobi group	4.67616	36	-	FTMT01	53	4193	4056	1/14/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05880573	GCA_900156015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/015/GCA_900156015.1_IMG-taxon_2708742466_annotated_assembly	-	RU33C
Mesorhizobium sp. LSHC426A00	1287298	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.49018	62.5	-	AYVV01	57	6392	5954	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359685	GCA_000502695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/695/GCA_000502695.1_Mloti_LSHC426A00	-	LSHC426A00
Variovorax sp. SCN 67-85	1660152	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	7.71254	67.4	-	MEFM01	61	7035	6885	9/13/16	9/13/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03652489	GCA_001725035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/035/GCA_001725035.1_ASM172503v1	26031303	-
Xanthomonas translucens pv. undulosa	487909	PRJNA326107	326107	Proteobacteria	Gammaproteobacteria	4.4947	68	-	MADT01	299	3891	3519	8/18/16	4/5/17	Scaffold	The Connecticut Agricultural Experiment Station	SAMN05258688	GCA_001707195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/195/GCA_001707195.1_NARK-1	-	NARK-1
Microbacterium sp. GCS4	1692239	PRJNA291338	291338	Terrabacteria group	Actinobacteria	3.65291	69.5	-	LGYE01	7	3515	3436	8/6/15	4/11/17	Contig	University of Exeter	SAMN03941641	GCA_001262495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/495/GCA_001262495.1_GCS4v1	26769927	GCS4
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.80776	58.7	-	LNXN01	59	4610	4470	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339878	GCA_001682005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/005/GCA_001682005.1_ASM168200v1	-	S3903
Sphingopyxis sp. REDSEA-S23_B6	1811567	PRJNA289734	289734	Proteobacteria	Alphaproteobacteria	3.23572	65.1	-	LURB01	118	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534656	GCA_001628235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/235/GCA_001628235.1_ASM162823v1	27377622	-
Bacillus velezensis	492670	PRJNA196467	196467	Terrabacteria group	Firmicutes	4.1347	46	-	AQGM01	79	4107	3984	6/5/13	3/22/17	Contig	Nanjing University of Technology	SAMN02470571	GCA_000408925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/925/GCA_000408925.1_BL	23887917	-
Gilliamella apicola	1196095	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	3.03721	33.7	-	NAHS01	529	2744	2581	4/13/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603504	GCA_002088815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/815/GCA_002088815.1_ASM208881v1	-	NO8
Klebsiella michiganensis	1134687	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.22127	55.8	-	JVON01	257	6011	5744	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197437	GCA_001054755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/755/GCA_001054755.1_ASM105475v1	26230489	247_KOXY
Achromobacter sp. 2789STDY5608616	1806499	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	6.84957	67.4	-	CYTD01	49	6383	6148	9/19/15	4/11/17	Scaffold	SC	SAMEA2247581	GCA_001299265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/265/GCA_001299265.1_11861_6_10	-	2789STDY5608616
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.74175	50.9	-	MPRY01	69	2682	2573	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016296	GCA_002020895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/895/GCA_002020895.1_ASM202089v1	-	-
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.75397	32.2	-	FQME01	15	2720	2560	11/23/16	4/5/17	Contig	SC	SAMEA3449130	GCA_900126965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/965/GCA_900126965.1_17175_3_74	-	3688STDY6125128
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.7083	57.1	-	NQEK01	74	5769	5479	8/11/17	8/15/17	Contig	JCVI	SAMN07450695	GCA_002248565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/565/GCA_002248565.1_ASM224856v1	-	KPPSTH03
Fibrobacter sp. UBA4309	1946537	PRJNA348753	348753	FCB group	Fibrobacteres	2.88082	54.2	-	DGUN01	82	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453871	GCA_002395745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/745/GCA_002395745.1_ASM239574v1	28894102	-
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.79248	67.5	-	LPLD01	120	7089	6702	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449636	GCA_001533485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/485/GCA_001533485.1_ASM153348v1	-	MSMB729WGS
Xanthomonas axonopodis pv. manihotis str. ThaiXam	1185705	PRJNA163805	163805	Proteobacteria	Gammaproteobacteria	4.87462	65.2	-	AKEK01	324	4437	3984	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090341	GCA_000266345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/345/GCA_000266345.1_ThaiXam	22699502	ThaiXam
Candidatus Microthrix sp. UBA3493	1946180	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.00438	50.6	-	DFQI01	195	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457111	GCA_002377685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/685/GCA_002377685.1_ASM237768v1	28894102	-
Catabacter sp. UBA3857	1946261	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.42443	56.8	-	DGHD01	61	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453626	GCA_002392505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/505/GCA_002392505.1_ASM239250v1	28894102	-
Catabacter sp. UBA4263	1946267	PRJNA348753	348753	Terrabacteria group	Firmicutes	4.761	52.8	-	DGWH01	171	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456226	GCA_002395225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/225/GCA_002395225.1_ASM239522v1	28894102	-
Candidatus Microthrix sp. UBA3492	1946179	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.64551	40.7	-	DFQJ01	123	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457112	GCA_002377725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/725/GCA_002377725.1_ASM237772v1	28894102	-
Xanthomonas axonopodis pv. manihotis str. UA536	1185666	PRJNA163727	163727	Proteobacteria	Gammaproteobacteria	4.8663	65.1	-	AKEQ01	142	4303	3995	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090347	GCA_000266365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/365/GCA_000266365.1_UA536	22699502	UA536
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.53502	67.7	-	LPLE01	90	6848	6490	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449638	GCA_001533495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/495/GCA_001533495.1_ASM153349v1	-	MSMB739WGS
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.50656	57.6	-	NQCW01	85	5559	5244	8/11/17	8/15/17	Contig	JCVI	SAMN07450604	GCA_002248945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/945/GCA_002248945.1_ASM224894v1	-	KPCTRSRTH05
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.75373	32.3	-	FQMG01	22	2724	2550	11/23/16	4/6/17	Contig	SC	SAMEA3449132	GCA_900126975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/975/GCA_900126975.1_17175_3_76	-	3688STDY6125130
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.61371	51	-	MPRD01	70	2577	2471	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016277	GCA_002020995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/995/GCA_002020995.1_ASM202099v1	-	-
Achromobacter sp. 2789STDY5608623	1806503	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	6.64411	67.5	-	CYSZ01	32	6128	5942	9/19/15	4/11/17	Scaffold	SC	SAMEA2247588	GCA_001299295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/295/GCA_001299295.1_11861_6_17	-	2789STDY5608623
Klebsiella michiganensis	1134687	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.00684	55.7	-	JVJS01	220	5879	5599	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197562	GCA_001054995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/995/GCA_001054995.1_ASM105499v1	26230489	371_KOXY
Gilliamella apicola	1196095	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	3.07643	33.6	-	NAHT01	147	2772	2646	4/13/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603505	GCA_002088825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/825/GCA_002088825.1_ASM208882v1	-	N-12-12
Bacillus velezensis	492670	PRJNA200105	200105	Terrabacteria group	Firmicutes	4.13565	46	-	ARYD01	81	4116	3982	6/13/13	3/22/17	Contig	Nanjing University of Technology	SAMN02470568	GCA_000410835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/835/GCA_000410835.1_ATCC12321	23908297	-
Sphingopyxis sp. REDSEA-S24_B7	1811568	PRJNA289734	289734	Proteobacteria	Alphaproteobacteria	1.75333	65.3	-	LURC01	439	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534657	GCA_001628255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/255/GCA_001628255.1_ASM162825v1	27377622	-
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.78742	58.8	-	LNXO01	69	4587	4449	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339879	GCA_001682035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/035/GCA_001682035.1_ASM168203v1	-	S3940
Microbacterium sp. Leaf288	1736323	PRJNA297956	297956	Terrabacteria group	Actinobacteria	4.7478	70	-	LMNI01	17	4164	4063	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151713	GCA_001422925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/925/GCA_001422925.1_Leaf288	26633631	Leaf288
Xanthomonas translucens pv. undulosa	487909	PRJNA326107	326107	Proteobacteria	Gammaproteobacteria	4.59617	67.5	-	MADU01	556	4197	3397	8/18/16	4/5/17	Scaffold	The Connecticut Agricultural Experiment Station	SAMN05258727	GCA_001707225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/225/GCA_001707225.1_MC	-	BLSW16
Variovorax sp. SCN 67-20	1660153	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	7.72269	67.4	-	MEGR01	97	7053	6870	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652521	GCA_001725775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/775/GCA_001725775.1_ASM172577v1	26031303	-
Mesorhizobium sp. LSHC432A00	1287303	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	5.99087	62.8	-	AYVU01	21	5910	5586	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359686	GCA_000502715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/715/GCA_000502715.1_Mloti_LSHC432A00	-	LSHC432A00
Chryseobacterium sp. JV274	1932669	PRJEB18783	371337	FCB group	Bacteroidetes/Chlorobi group	5.15494	36.4	-	FTPE01	19	4694	4558	2/6/17	4/17/17	Contig	UMR5557	SAMEA43981918	GCA_900156935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/935/GCA_900156935.1_JV274	-	-
Halomonas sp. JCM 19032	1460633	PRJDB1611	243812	Proteobacteria	Gammaproteobacteria	3.47773	56.8	-	BAWY01	145	-	-	10/1/15	10/1/15	Contig	"Microbe Division/JCM, RIKEN BioResource Center"	SAMD00000370	GCA_001310355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/355/GCA_001310355.1_ASM131035v1	-	JCM 19032
Rhizobium sp. CF258	1500300	PRJNA247544	247544	Proteobacteria	Alphaproteobacteria	6.64433	60	-	JQME01	35	6365	6168	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02787125	GCA_000744575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/575/GCA_000744575.1_ASM74457v1	-	CF258
Neisseria sp. HMSC056A04	1715047	PRJNA296174	296174	Proteobacteria	Betaproteobacteria	2.23982	48.8	-	LTRE01	37	2177	2061	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498579	GCA_001836315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/315/GCA_001836315.1_ASM183631v1	-	HMSC056A04
Campylobacter sp. BCW_6464	1903581	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.87488	30.3	-	MJXM01	89	2010	1825	10/4/16	4/13/17	Scaffold	University of California at Davis	SAMN03360173	GCA_001762775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/775/GCA_001762775.1_ASM176277v1	-	BCW_6464
Prochlorococcus sp. scB241_527E14	1471444	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.10855	31.3	-	JFKU01	271	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671315	GCA_000634035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/035/GCA_000634035.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Bacteroides sp. CAG:20	1262738	PRJEB754	206640	FCB group	Bacteroidetes/Chlorobi group	3.13758	43.5	-	CAXI01	83	2602	2556	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138469	GCA_000431635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/635/GCA_000431635.1_MGS20	-	-
Thioalkalivibrio sp. ALE20	545275	PRJNA183024	183024	Proteobacteria	Gammaproteobacteria	2.84556	67.6	-	ARLU01	28	2724	2595	4/23/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441323	GCA_000381405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/405/GCA_000381405.1_ASM38140v1	-	ALE20
Ruminococcus sp. Zagget11	1930004	PRJNA357304	357304	Terrabacteria group	Firmicutes	1.99752	45.1	-	MSHL01	69	-	-	1/10/17	1/10/17	Scaffold	University of Queensland	SAMN06140840	GCA_001941135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/135/GCA_001941135.1_ASM194113v1	-	-
Alcanivorax sp. UBA4152	1945987	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.44271	63.2	-	DFVU01	141	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453999	GCA_002380125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/125/GCA_002380125.1_ASM238012v1	28894102	-
Paenibacillus sp. FSL R5-808	1227076	PRJNA173824	173824	Terrabacteria group	Firmicutes	6.44839	48.8	-	ASPT01	89	5901	5704	1/13/14	4/9/17	Contig	Cornell University	SAMN02597348	GCA_000517885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/885/GCA_000517885.1_ASM51788v1	24422886	FSL R5-808
Psychrobacter sp. UBA3962	1947352	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.80712	42.4	-	DGDC01	52	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454531	GCA_002385225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/225/GCA_002385225.1_ASM238522v1	28894102	-
Acidovorax sp. 35-64-16	1970312	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	4.02289	63.7	-	NCFM01	73	3763	3625	8/16/17	8/16/17	Scaffold	None	SAMN06622320	GCA_002281195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/195/GCA_002281195.1_ASM228119v1	-	-
Marinobacter sp. UBA4153	1946821	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.66021	56.3	-	DFVT01	343	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453998	GCA_002380095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/095/GCA_002380095.1_ASM238009v1	28894102	-
Nocardioides sp. REDSEA-S34_B5	1811555	PRJNA289734	289734	Terrabacteria group	Actinobacteria	4.16828	71.7	-	LUPL01	291	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534613	GCA_001627345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/345/GCA_001627345.1_ASM162734v1	27377622	-
Methylobacterium sp. Leaf469	1736387	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.70085	68.9	-	LMRE01	46	4378	4179	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151777	GCA_001424745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/745/GCA_001424745.1_Leaf469	26633631	Leaf469
Enterococcus sp. GMD3E	1169667	PRJNA157405	157405	Terrabacteria group	Firmicutes	2.27507	38	-	AJRB03	97	2344	2202	9/14/12	4/8/17	Contig	Los Alamos National Laboratory	SAMN02470257	GCA_000296915.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/915/GCA_000296915.3_ASM29691v3	23493677	GMD3E
Prevotella sp. P2-180	2024224	PRJNA396820	396820	FCB group	Bacteroidetes/Chlorobi group	4.10623	45.6	-	NPJI01	116	3463	3301	8/14/17	8/16/17	Contig	University of Ljubljana	SAMN07431219	GCA_002251435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/435/GCA_002251435.1_ASM225143v1	-	P2-180
Mycobacterium sp. UM_3	1638774	PRJNA280197	280197	Terrabacteria group	Actinobacteria	5.22616	68.9	-	LATB01	329	5028	4677	10/26/15	4/11/17	Contig	Universiti Malaya	SAMN03458309	GCA_001414095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/095/GCA_001414095.1_ASM141409v1	-	UM_3
Streptococcus sp. HMSC073F11	1739268	PRJNA299918	299918	Terrabacteria group	Firmicutes	1.87558	40.4	-	LTHG01	21	1927	1805	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477582	GCA_001810785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/785/GCA_001810785.1_ASM181078v1	-	HMSC073F11
Bradyrhizobium sp. LMTR 3	189873	PRJNA325368	325368	Proteobacteria	Alphaproteobacteria	7.83474	62.3	-	MAXC01	55	7328	7024	7/25/16	4/17/17	Contig	Universidad Nacional Agraria La Molina	SAMN05230121	GCA_001693485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/485/GCA_001693485.1_ASM169348v1	-	LMTR 3
Arthrobacter sp. HMSC06H05	1581128	PRJNA269897	269897	Terrabacteria group	Actinobacteria	2.17771	60.1	-	LWOA01	38	1916	1801	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03434235	GCA_001807395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/395/GCA_001807395.1_ASM180739v1	-	HMSC06H05
Corynebacterium sp. HMSC077D03	1739392	PRJNA300042	300042	Terrabacteria group	Actinobacteria	2.63638	59.2	-	LTXJ01	61	2487	2347	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480074	GCA_001808545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/545/GCA_001808545.1_ASM180854v1	-	HMSC077D03
Staphylococcus sp. HMSC034G11	1739278	PRJNA299928	299928	Terrabacteria group	Firmicutes	2.36358	32.1	-	LWQO01	60	2313	2202	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477592	GCA_001810985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/985/GCA_001810985.1_ASM181098v1	-	HMSC034G11
Enterobacter sp. BWH64	1686388	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.80028	55.5	-	LETD01	3	4657	4452	6/19/15	4/10/17	Scaffold	Broad Institute	SAMN03280180	GCA_001037645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/645/GCA_001037645.1_Ente_cloa_complex_BWH64_V1	-	BWH64
Rhodococcus sp. HS-D2	1384636	PRJNA293396	293396	Terrabacteria group	Actinobacteria	5.74729	67.5	-	LUTX01	202	5432	5103	5/18/16	4/12/17	Contig	Central China Normal University	SAMN04549370	GCA_001651055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/055/GCA_001651055.1_ASM165105v1	-	HS-D2
Synechococcus sp. 7002	1938862	PRJEB20275	381738	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.43443	49.2	-	FXWN01	6	3273	3119	5/13/17	5/24/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06272774	GCA_900177825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/825/GCA_900177825.1_IMG-taxon_2708742468_annotated_assembly	-	7002
Sphingomonas sp. UNC305MFCol5.2	1449076	PRJNA234882	234882	Proteobacteria	Alphaproteobacteria	4.23998	65.9	-	JOOE01	7	3969	3862	6/25/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02745504	GCA_000712135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/135/GCA_000712135.1_ASM71213v1	-	UNC305MFCol5.2
Clostridium sp. K25	1443109	PRJNA233465	233465	Terrabacteria group	Firmicutes	2.60234	27.8319	plasmid p1K25:NZ_CM003344.1/CM003344.1; plasmid p2K25:NZ_CM003345.1/CM003345.1	JENU01	88	2512	2357	6/20/14	4/10/17	Contig	National Veterinary Institute (SVA)	SAMN02593754	GCA_000724285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/285/GCA_000724285.2_K25_1.0	25254374	K25
Bacillus sp. J37	935837	PRJNA202365	202365	Terrabacteria group	Firmicutes	5.33505	36	-	JAEK01	96	5130	4931	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02584959	GCA_000518865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/865/GCA_000518865.1_ASM51886v1	-	J37
Klebsiella sp. NFIX43	1566154	PRJEB16998	351106	Proteobacteria	Gammaproteobacteria	5.28875	58.1	-	FOGX01	22	5229	4979	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159347	GCA_900111335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/335/GCA_900111335.1_IMG-taxon_2600255281_annotated_assembly	-	NFIX43
Flavobacterium sp. SCGC AAA160-P02	1009412	PRJNA195656	195656	FCB group	Bacteroidetes/Chlorobi group	2.54461	31.8	-	ARTD01	80	-	-	4/26/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441636	GCA_000383355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/355/GCA_000383355.1_ASM38335v1	-	SCGC AAA160-P02
Acinetobacter sp. NIPH 2100	1217708	PRJNA183225	183225	Proteobacteria	Gammaproteobacteria	3.92951	41	-	APSB01	1	3653	3502	4/17/13	4/6/17	Scaffold	Broad Institute	SAMN01828129	GCA_000369805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/805/GCA_000369805.1_Acin_sp_NIPH_2100_V1	-	NIPH 2100
Paeniclostridium sordellii	1505	PRJEB8154	277678	Terrabacteria group	Firmicutes	3.42208	27.4	-	CDPO01	24	3335	3241	3/10/15	4/4/17	Scaffold	WTSI	SAMEA1572112	GCA_001372955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/955/GCA_001372955.1_UMC164	-	UMC164
Streptomyces sp. FxanaD5	1157639	PRJNA169738	169738	Terrabacteria group	Actinobacteria	7.58613	72.1	-	ARDY01	103	7008	6621	4/19/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02441716	GCA_000373465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/465/GCA_000373465.1_ASM37346v1	-	FxanaD5
Pseudomonas sp. LAIL14HWK12:I7	1259801	PRJNA179456	179456	Proteobacteria	Gammaproteobacteria	5.95377	62.5	-	AXYZ01	28	5339	5175	10/25/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440735	GCA_000483465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/465/GCA_000483465.1_ASM48346v1	-	LAIL14HWK12:I7
Elizabethkingia anophelis	1117645	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	3.90717	35.7	-	MAFY01	22	3551	3472	3/7/17	3/10/17	Scaffold	CDC	SAMN04567744	GCA_002023105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/105/GCA_002023105.1_ASM202310v1	-	CSID_3015183678
Leclercia adecarboxylata	83655	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.49043	55.9	-	DFXG01	28	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453440	GCA_002383125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/125/GCA_002383125.1_ASM238312v1	28894102	-
Mycobacterium chelonae	1774	PRJNA299467	299467	Terrabacteria group	Actinobacteria	5.02377	63.9	-	LQON01	9	4923	4798	4/20/17	4/22/17	Contig	University of Trento	SAMN04216917	GCA_002102055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/055/GCA_002102055.1_ASM210205v1	-	ATCC 35752
Streptococcus sobrinus TCI-172	1074139	PRJNA72027	72027	Terrabacteria group	Firmicutes	2.14039	43.4	-	AGHQ01	393	2207	1895	10/6/11	3/30/17	Contig	JCVI	SAMN02436544	GCA_000228605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/605/GCA_000228605.2_SMUT5-NEX_8-172	-	TCI-172
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.26377	66.9	-	LOYD01	68	7666	7290	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449286	GCA_001524835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/835/GCA_001524835.1_ASM152483v1	-	MSMB1129
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.06677	64.1	-	FVKA01	11	5084	4898	3/10/17	3/18/17	Contig	SC	SAMEA2070897	GCA_900134785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/785/GCA_900134785.1_10208_3_24	-	449
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.12976	55.2	-	LDBE01	44	5021	4796	5/21/15	4/6/17	Contig	JCVI	SAMN03495940	GCA_001011205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/205/GCA_001011205.1_ASM101120v1	-	GN02326
Kingella kingae KK171	1305773	PRJEB1625	194497	Proteobacteria	Betaproteobacteria	1.99293	46.6	-	CBSK01	1	1915	1618	9/11/13	4/3/17	Scaffold	URMITE	SAMEA3146255	GCA_001050895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/895/GCA_001050895.1_ASM105089v1	-	KK171
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.01093	55.2	-	LAAJ01	75	5006	4757	3/19/15	3/26/17	Contig	JCVI	SAMN03283628	GCA_000956825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/825/GCA_000956825.1_ASM95682v1	-	34988
Citrobacter freundii	546	PRJNA274332	274332	Proteobacteria	Gammaproteobacteria	4.87048	51.7	-	LAZI01	19	4805	4592	4/30/15	4/3/17	Contig	University of Huddersfield	SAMN03325972	GCA_000982845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/845/GCA_000982845.1_ASM98284v1	26044421	SA79
Acinetobacter pittii	48296	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.18945	38.7	-	LLCV01	68	4233	3989	11/5/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145626	GCA_001432435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/435/GCA_001432435.1_ASM143243v1	-	ABBL015
Pseudomonas amygdali pv. lachrymans	53707	PRJNA285235	285235	Proteobacteria	Gammaproteobacteria	6.05612	58.5	-	LGLJ01	128	5661	5303	9/18/15	4/4/17	Scaffold	University of Toronto	SAMN03837736	GCA_001293835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/835/GCA_001293835.1_Pla3988	-	3988
Enterobacter asburiae	61645	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.50142	56	-	JWAA01	100	4321	4181	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197138	GCA_001052355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/355/GCA_001052355.1_ASM105235v1	26230489	1180_ECLO
Taylorella equigenitalis	29575	PRJNA385665	385665	Proteobacteria	Betaproteobacteria	1.63533	37.6	chromosome:NZ_CP021201.1/CP021201.1	-	1	1510	1437	9/8/17	9/11/17	Complete Genome	USDA APHIS VS NVSL	SAMN06899359	GCA_002288205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/205/GCA_002288205.1_ASM228820v1	-	09-0932
Pseudoalteromonas sp. PAB 2.2	1841508	PRJNA321134	321134	Proteobacteria	Gammaproteobacteria	4.43464	41.6	-	LYPI01	40	3993	3810	1/6/17	4/16/17	Contig	UFRJ	SAMN04903162	GCA_001938575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/575/GCA_001938575.1_ASM193857v1	-	PAB 2.2
Klebsiella variicola	244366	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.60907	57.3	-	JURI01	207	5592	5285	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03198040	GCA_001066505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/505/GCA_001066505.1_ASM106650v1	26230489	833_KPNE
Acinetobacter nosocomialis	106654	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.459	38.4	-	DCLF01	181	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451773	GCA_002320905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/905/GCA_002320905.1_ASM232090v1	28894102	-
Streptococcus oralis	1303	PRJNA328451	328451	Terrabacteria group	Firmicutes	1.93408	41.1	-	MBDM01	13	1922	1804	11/23/16	4/5/17	Contig	Public Health Agency of Canada	SAMN05371533	GCA_001885595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/595/GCA_001885595.1_ASM188559v1	-	SC15-3744
Staphylococcus hominis	1290	PRJEB10524	374818	Terrabacteria group	Firmicutes	2.25	31.3	-	FBVL01	83	2202	2103	2/12/17	2/23/17	Scaffold	UNIVERSITY OF LIVERPOOL	SAMEA3515760	GCA_900006945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/006/945/GCA_900006945.1_S.hominis_I4	-	-
Lactobacillus paracasei NRIC 1917	1435039	PRJDB1560	277563	Terrabacteria group	Firmicutes	2.96089	46.3	-	BAYN01	141	3001	2818	3/12/15	4/3/17	Contig	Tokyo University of Agriculture	SAMD00000557	GCA_000958505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/505/GCA_000958505.1_ASM95850v1	25931593	NRIC1917
Gardnerella vaginalis	2702	PRJNA288563	288563	Terrabacteria group	Actinobacteria	1.73225	41.4	-	LFWD01	11	1491	1343	7/8/15	4/3/17	Contig	Medical Diagnostic Laboratories	SAMN03801593	GCA_001049785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/785/GCA_001049785.1_ASM104978v1	26337887	3549624
Lactobacillus crispatus	47770	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.05287	36.8	-	LYRI01	75	2101	1892	7/14/17	7/17/17	Scaffold	University of Minnesota	SAMN04498991	GCA_002218965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/965/GCA_002218965.1_ASM221896v1	-	UMNLC19
Pectobacterium carotovorum subsp. carotovorum	555	PRJNA269237	269237	Proteobacteria	Gammaproteobacteria	4.82633	52.2	-	JUJS01	6	4391	4229	12/29/14	4/2/17	Scaffold	Beijing Academy of Agriculture and Forestry Sciences	SAMN03252620	GCA_000808515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/515/GCA_000808515.1_ASM80851v1	-	BC T5
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.74354	47.6	-	MEAD01	78	3459	3281	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320405	GCA_001883365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/365/GCA_001883365.1_ASM188336v1	-	00/1793-k2
Flavobacterium psychrophilum	96345	PRJEB21067	396411	FCB group	Bacteroidetes/Chlorobi group	2.71931	32.3	-	FYCS01	47	2451	2361	7/29/17	8/7/17	Contig	INRA	SAMEA104125752	GCA_900186525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/525/GCA_900186525.1_IT09_V1	-	IT09
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.94603	67.1	-	LOYE01	138	7297	6896	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449287	GCA_001524745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/745/GCA_001524745.1_ASM152474v1	-	MSMB1172
Aeromonas hydrophila	644	PRJNA321184	321184	Proteobacteria	Gammaproteobacteria	4.97356	60.9	-	LYZH01	12	4604	4417	8/17/16	4/5/17	Contig	Mississippi State University	SAMN04967902	GCA_001705945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/945/GCA_001705945.1_ASM170594v1	-	Arkansas 2010
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.46353	63.4	-	DGNW01	8	-	-	9/28/17	9/28/17	Contig	University of Queensland	SAMN06456367	GCA_002389115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/115/GCA_002389115.1_ASM238911v1	28894102	-
Enterococcus faecalis	1351	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.86059	37.6	chromosome:CP022059.1	-	1	2939	2572	6/27/17	6/27/17	Complete Genome	US Food and Drug Administration 	SAMN06173351	GCA_002208945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/945/GCA_002208945.1_ASM220894v1	-	FDAARGOS_338
Vibrio sp. L85	1769292	PRJNA305262	305262	Proteobacteria	Gammaproteobacteria	6.36894	44.8	-	LPVH01	270	5962	5720	3/14/17	3/16/17	Contig	Institute of microbiology Chinese academy of sciences	SAMN04321321	GCA_002026255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/255/GCA_002026255.1_ASM202625v1	-	L85
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.22282	36.7	-	LPSK01	5	2327	2200	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305171	GCA_001560635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/635/GCA_001560635.1_NG05B_CO5_04	-	NG05B_CO5_04
Bifidobacterium breve	1685	PRJNA379831	379831	Terrabacteria group	Actinobacteria	2.34482	58.8	-	NAQI01	22	2081	1866	3/31/17	4/6/17	Contig	University of Parma	SAMN06621709	GCA_002076075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/075/GCA_002076075.1_Bbif1889B	-	1889B
Mycobacterium abscessus 3A-0122-S	1001716	PRJNA65161	65161	Terrabacteria group	Actinobacteria	5.23367	64.1	-	AKUZ01	18	5306	5198	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00672648	GCA_000270585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/585/GCA_000270585.1_ASM27058v1	-	3A-0122-S
Moraxella catarrhalis	480	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.83021	41.7	-	JVFD01	37	1700	1588	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197681	GCA_001063475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/475/GCA_001063475.1_ASM106347v1	26230489	489_MCAT
Lactobacillus salivarius	1624	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.83868	32.7	-	JVAF01	111	1816	1691	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197809	GCA_001063855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/855/GCA_001063855.1_ASM106385v1	26230489	609_LSAL
Cronobacter sakazakii	28141	PRJNA307649	307649	Proteobacteria	Gammaproteobacteria	4.39614	57	-	LQQM01	36	4201	4015	4/13/16	4/5/17	Contig	University of Malaya	SAMN04384248	GCA_001619915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/915/GCA_001619915.1_ASM161991v1	-	M30
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.34114	55.6	-	FLAH01	95	6235	5903	5/19/16	2/21/17	Scaffold	SC	SAMEA2273639	GCA_900083565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/565/GCA_900083565.1_12082_4_84	-	2880STDY5682563
Enterobacter cloacae UCI 23	1400146	PRJNA219273	219273	Proteobacteria	Gammaproteobacteria	4.96414	55.5	-	JCKX01	5	4821	4586	2/3/14	3/24/17	Scaffold	Broad Institute	SAMN02356603	GCA_000534295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/295/GCA_000534295.1_Ente_cloa_UCI_23_V1	-	UCI 23
Proteus mirabilis	584	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.15522	38.1	-	NJFA01	1	3851	3576	6/23/17	6/26/17	Contig	US Food and Drug Administration 	SAMN06173297	GCA_002206145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/145/GCA_002206145.1_ASM220614v1	-	FDAARGOS_284
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.50998	32.7	-	CUCW01	90	2467	2354	3/31/15	3/26/17	Contig	SC	SAMEA1035092	GCA_001230445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/445/GCA_001230445.1_7067_4_39	-	51-08
Propionibacterium acnes HL087PA3	765083	PRJNA49199	49199	Terrabacteria group	Actinobacteria	2.51682	60.1	-	ADYA01	20	2547	2427	7/30/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189245	GCA_000144485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/485/GCA_000144485.1_ASM14448v1	-	HL087PA3
Burkholderia sp. MSHR3999	1542965	PRJNA260165	260165	Proteobacteria	Betaproteobacteria	7.89424	66.9	-	JRFO01	7	7130	6682	2/9/15	4/10/17	Contig	Los Alamos National Laboratory	SAMN03019860	GCA_000833595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/595/GCA_000833595.1_GFC_23	-	MSHR3999
Campylobacter coli 1091	887290	PRJNA52717	52717	Proteobacteria	delta/epsilon subdivisions	1.65467	31.3	-	AIMV01	132	1711	1607	3/16/12	3/15/17	Contig	Cornell University	SAMN02429020	GCA_000253675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/675/GCA_000253675.2_ASM25367v2	-	1091
Mannheimia haemolytica	75985	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.59285	40.9	-	LQEM01	98	2667	2511	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366534	GCA_001929715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/715/GCA_001929715.1_ASM192971v1	-	2597MH
Leuconostoc mesenteroides subsp. mesenteroides	33967	PRJNA314170	314170	Terrabacteria group	Firmicutes	2.12404	37.6	chromosome:NZ_CP015442.1/CP015442.1	-	1	2143	2002	5/2/17	5/6/17	Complete Genome	State Key Laboratory of Dairy Biotechnology	SAMN04530070	GCA_002117185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/185/GCA_002117185.1_ASM211718v1	-	BD1710
Serratia marcescens	615	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.1875	59.8	-	LFBT01	1	4903	4743	6/19/15	4/10/17	Scaffold	Broad Institute	SAMN03280434	GCA_001034405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/405/GCA_001034405.1_Serr_marc_UCI88_V1	-	UCI88
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.15392	39.9	-	FQSZ01	5	1038	940	5/10/17	5/24/17	Scaffold	WTSI	SAMEA1094332	GCA_900118895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/895/GCA_900118895.1_7067_6_71	-	S3_3
Leuconostoc mesenteroides subsp. mesenteroides	33967	PRJNA352459	352459	Terrabacteria group	Firmicutes	2.2246	37.5	-	MPLP01	54	2255	2099	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981504	GCA_002092745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/745/GCA_002092745.1_ASM209274v1	28217118	LN27
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.00594	41.7	-	JJPS01	222	3438	3207	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708977	GCA_000979745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/745/GCA_000979745.1_gtlEnvA5udCFS	25756680	3.H.A.2.8
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.45594	46.9	-	CWGM01	93	4170	3934	6/27/15	3/26/17	Contig	SC	SAMEA980194	GCA_001174945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/945/GCA_001174945.1_5749_7_5	-	YE74/03
Bartonella sp. WD16.2	1933904	PRJNA360985	360985	Proteobacteria	Alphaproteobacteria	1.763	37.6	chromosome:NZ_CP019781.1/CP019781.1	-	1	1527	1349	3/7/17	3/10/17	Complete Genome	University of Basel	SAMN06213866	GCA_002022505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/505/GCA_002022505.1_ASM202250v1	-	WD16.2
Corynebacterium diphtheriae	1717	PRJNA341832	341832	Terrabacteria group	Actinobacteria	2.44557	53.6	-	MIOI01	50	2410	2209	11/10/16	8/24/17	Contig	National Institute for Communicable Diseases	SAMN05729425	GCA_001876085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/085/GCA_001876085.1_ASM187608v1	28726616	ST378-KZN-2015-45466
Sinorhizobium meliloti AE608H	1194714	PRJNA167596	167596	Proteobacteria	Alphaproteobacteria	7.34718	62	-	AKZW01	223	7558	6921	8/13/12	5/19/17	Scaffold	University of Florence	SAMN02471752	GCA_000287555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/555/GCA_000287555.1_SMAE608H_v1	23431003	AE608H
Bordetella bronchiseptica D989	1458259	PRJNA237084	237084	Proteobacteria	Betaproteobacteria	5.32288	68.1	-	JGWU01	76	5157	4948	5/12/14	4/4/17	Contig	JCVI	SAMN02614577	GCA_000690215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/215/GCA_000690215.2_gbb62v01	25908122	D989
Streptococcus intermedius	1338	PRJDB3973	356118	Terrabacteria group	Firmicutes	2.00688	37.6	chromosome:AP014880.1	-	1	2092	2007	12/2/16	6/15/17	Complete Genome	"Pathogen Genomics Center, National Institute of Infectious Diseases"	SAMD00031898	GCA_002356055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/055/GCA_002356055.1_ASM235605v1	-	TYG1620
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31255	57.2358	chromosome 1:NZ_CP018542.1/CP018542.1; chromosome 2:NZ_CP018543.1/CP018543.1	-	2	3374	3144	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932916	GCA_002191635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/635/GCA_002191635.1_ASM219163v1	28388689	BwIM_TUR_15
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.82771	46.6	-	JUIL01	630	2998	2405	7/1/15	4/10/17	Contig	Wageningen University	SAMN03196657	GCA_001044015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/015/GCA_001044015.1_ASM104401v1	26048937	Lr071
Pasteurella multocida subsp. multocida	44283	PRJNA244049	244049	Proteobacteria	Gammaproteobacteria	2.36342	40.4	-	JQAO01	37	2257	2163	6/18/15	4/3/17	Contig	Murdoch University	SAMN02721466	GCA_001029495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/495/GCA_001029495.1_ASM102949v1	26151935	BUKK
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12581	41.2	-	CWAR01	77	2055	1877	6/24/15	3/26/17	Contig	SC	SAMEA1032791	GCA_001175625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/625/GCA_001175625.1_6903_3_42	-	EQUI0091
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.68864	66.3	-	JUQS01	746	4536	4113	7/10/15	3/26/17	Contig	University of Washington	SAMN03198056	GCA_001075145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/145/GCA_001075145.1_ASM107514v1	26230489	847.rep2_SMAL
Bacillus amyloliquefaciens	1390	PRJNA321940	321940	Terrabacteria group	Firmicutes	3.76536	46.1	-	LYUG01	26	3856	3664	6/21/16	4/5/17	Contig	Microbial Institue for Fermentation Industry	SAMN05162510	GCA_001672615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/615/GCA_001672615.1_ASM167261v1	-	SRCM101266
Chlamydia psittaci NJ1	1050221	PRJNA68341	68341	PVC group	Chlamydiae	1.16821	38.9599	plasmid unnamed:NZ_CM003517.1/CM003517.1	AFVK01	4	1038	979	10/21/15	4/4/17	Scaffold	CDC	SAMN04201204	GCA_001401475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/475/GCA_001401475.1_ASM140147v1	25887617	NJ1
"Enterococcus faecium 1,231,410"	565660	PRJNA32961	32961	Terrabacteria group	Firmicutes	3.1016	38.2	-	ACBA01	69	3055	2878	6/15/09	3/22/17	Scaffold	Broad Institute	SAMN02595271	GCA_000157595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/595/GCA_000157595.1_ASM15759v1	-	"1,231,410"
Neisseria gonorrhoeae SK32402	1351774	PRJNA209465	209465	Proteobacteria	Betaproteobacteria	2.12608	52.4	-	ATPX01	455	2516	2133	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02338801	GCA_001025545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/545/GCA_001025545.1_ASM102554v1	-	SK32402
Streptococcus mutans TCI-212	1074157	PRJNA72057	72057	Terrabacteria group	Firmicutes	1.77143	37	-	AGLM01	194	1797	1660	10/6/11	3/22/17	Contig	JCVI	SAMN02436452	GCA_000229425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/425/GCA_000229425.2_SMUT6-NEX_6-212	-	TCI-212
Enterococcus faecalis TX0411	749506	PRJNA47167	47167	Terrabacteria group	Firmicutes	3.12459	37.2	-	AECA01	75	3283	3121	9/9/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189113	GCA_000148185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/185/GCA_000148185.1_ASM14818v1	-	TX0411
Brucella suis F8/06-2	1160231	PRJNA173606	173606	Proteobacteria	Alphaproteobacteria	3.2979	57.2	-	AQOA01	17	3371	3130	4/16/13	4/1/17	Contig	Broad Institute	SAMN00811237	GCA_000365565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/565/GCA_000365565.1_Bruc_suis_F8_06-2_V1	-	F8/06-2
Enterococcus faecalis	1351	PRJNA316564	316564	Terrabacteria group	Firmicutes	2.80343	37.6	chromosome:NZ_CP014949.1/CP014949.1	-	1	2867	2695	3/28/16	3/28/17	Complete Genome	Harbin Institute of Technology	SAMN04585513	GCA_001598635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/635/GCA_001598635.1_ASM159863v1	-	LD33
Treponema pallidum subsp. pallidum	161	PRJNA322283	322283	Spirochaetes	Spirochaetia	1.13914	52.8	chromosome:NZ_CP016067.1/CP016067.1	-	1	1066	1004	8/25/16	4/5/17	Chromosome	"National Institute of Health, Portugal"	SAMN05150676	GCA_001713295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/295/GCA_001713295.1_ASM171329v1	-	PT_SIF1280
Borrelia burgdorferi IPT60	1408869	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.07457	28.6	-	AYBS01	568	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378836	GCA_000501975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/975/GCA_000501975.1_BorBurgIPT60	-	IPT60
Clostridium botulinum	1491	PRJNA290143	290143	Terrabacteria group	Firmicutes	3.17851	27.9	-	LHYX01	108	3078	2903	8/12/15	3/26/17	Scaffold	Anses	SAMN03876607	GCA_001266955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/955/GCA_001266955.1_ASM126695v1	26430029	47295-DC
Campylobacter concisus	199	PRJNA275352	275352	Proteobacteria	delta/epsilon subdivisions	1.84004	37.6	chromosome:NZ_CP012541.1/CP012541.1	-	1	1879	1767	9/24/15	4/4/17	Complete Genome	"Dr William Miller (USDA, ARS, WRRC)"	SAMN03342362	GCA_001298465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/465/GCA_001298465.1_ASM129846v1	-	ATCC 33237
Salinispora arenicola CNT800	1137253	PRJNA169712	169712	Terrabacteria group	Actinobacteria	5.52628	69.5	-	AZXG01	51	4998	4697	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597263	GCA_000515135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/135/GCA_000515135.1_ASM51513v1	-	CNT800
Lactobacillus casei	1582	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.79277	46.4	-	JVUA01	264	2899	2632	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197294	GCA_001062695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/695/GCA_001062695.1_ASM106269v1	26230489	1316.rep2_LPAR
Streptococcus intermedius	1338	PRJNA270135	270135	Terrabacteria group	Firmicutes	1.9082	37.6	chromosome:CP012718.1	-	1	1851	1746	9/22/15	9/22/15	Complete Genome	Chosun University	SAMN03263087	GCA_001296205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/205/GCA_001296205.1_ASM129620v1	-	KCOM 1545
Vibrio parahaemolyticus VPTS-2010	1238222	PRJNA176657	176657	Proteobacteria	Gammaproteobacteria	5.29646	45	-	JDFN01	75	5324	4618	3/4/14	3/18/17	Scaffold	IGS	SAMN01924114	GCA_000593345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/345/GCA_000593345.2_vpVPTS2010	-	VPTS-2010
Streptococcus mitis	28037	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.81981	40.4	-	NCVI01	20	1813	1682	4/18/17	4/21/17	Contig	Slagelse Hospital	SAMN06705600	GCA_002096895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/895/GCA_002096895.1_ASM209689v1	27325438	RH_17024_08
Oenococcus oeni S14	1428438	PRJNA229684	229684	Terrabacteria group	Firmicutes	1.73191	37.9	-	AZLI01	40	1788	1595	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02904291	GCA_000761955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/955/GCA_000761955.1_Oeoe_S14_1.0	24901216	S14
Xanthomonas oryzae pv. oryzae	64187	PRJNA269395	269395	Proteobacteria	Gammaproteobacteria	4.27442	63.9	-	JXDR01	413	4248	3421	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252494	GCA_001927465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/465/GCA_001927465.1_ASM192746v1	-	BXO33
Campylobacter fetus subsp. venerealis cfvi03/596	1273274	PRJNA184002	184002	Proteobacteria	delta/epsilon subdivisions	1.88212	33.2	-	LRAM01	103	1935	1813	8/5/16	4/5/17	Contig	Utrecht University	SAMN04417662	GCA_001699615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/615/GCA_001699615.1_ASM169961v1	27333878	cfvi03/596
Xanthomonas citri pv. glycines CFBP 7119	1365649	PRJNA212249	212249	Proteobacteria	Gammaproteobacteria	5.52032	64.3434	chromosome:NZ_CM002264.1/CM002264.1; plasmid unnamed1:NZ_CM002265.1/CM002265.1; plasmid unnamed2:NZ_CM002266.1/CM002266.1	AUWM01	4	5040	4652	10/30/13	4/2/17	Chromosome	INRA	SAMN02469937	GCA_000488895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/895/GCA_000488895.1_Xag-CFBP7119-G1	24336374	CFBP 7119
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002	390333	PRJNA222257	222257	Terrabacteria group	Firmicutes	1.75853	49.9	-	JQAV01	80	1797	1553	11/6/15	4/4/17	Scaffold	Shanghai Majorbio	SAMN02797778	GCA_001437195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/195/GCA_001437195.1_ASM143719v1	26415554	DSM 20081
Yersinia pseudotuberculosis	633	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.80661	47.4	-	CTIQ01	84	4503	4245	3/26/15	4/3/17	Scaffold	SC	SAMEA859888	GCA_001220805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/805/GCA_001220805.1_5139_3_4	-	IP32670
Brucella abortus bv. 5 str. B3196	520453	PRJNA36509	36509	Proteobacteria	Alphaproteobacteria	3.34344	57.1	-	ACXC01	48	3442	3160	4/1/10	3/22/17	Scaffold	Broad Institute	SAMN02595354	GCA_000163115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/115/GCA_000163115.1_ASM16311v1	-	B3196
Francisella tularensis subsp. novicida GA99-3549	430558	PRJNA19019	19019	Proteobacteria	Gammaproteobacteria	1.9013	32.3	-	AAYF01	9	1828	1716	5/14/07	3/30/17	Scaffold	Broad Institute	SAMN02595217	GCA_000154185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/185/GCA_000154185.1_ASM15418v1	-	GA99-3549
Shigella boydii	621	PRJNA293195	293195	Proteobacteria	Gammaproteobacteria	4.38003	50.7	-	LPSX01	455	5026	4110	12/15/16	2/26/17	Contig	"University of Maryland, School of Medicine"	SAMN04001711	GCA_001906425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/425/GCA_001906425.1_ASM190642v1	-	102252
Streptococcus salivarius	1304	PRJEB18413	355827	Terrabacteria group	Firmicutes	2.16298	40.1	-	FRCU01	18	2026	1923	12/2/16	4/6/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421814	GCA_900143035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/035/GCA_900143035.1_IMG-taxon_2687453658_annotated_assembly	-	ATCC 7073
Clostridioides difficile T14	1215085	PRJEB215	222739	Terrabacteria group	Firmicutes	3.98895	28.5	-	CANC01	491	3742	3469	10/14/13	3/15/17	Scaffold	LPBA	SAMEA3138904	GCA_000531295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/295/GCA_000531295.1_T14	24482682	T14
Vibrio cholerae MAK 757	412967	PRJNA18263	18263	Proteobacteria	Gammaproteobacteria	3.936	47.6	-	AAUS02	12	3693	3515	11/27/06	3/22/17	Scaffold	TIGR	SAMN02435868	GCA_000153865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/865/GCA_000153865.1_ASM15386v1	-	MAK 757
Ralstonia solanacearum MolK2	564065	PRJNA32085	32085	Proteobacteria	Betaproteobacteria	5.55188	66.7	-	CAHW02	349	5122	4532	3/30/12	4/3/17	Contig	Genoscope	SAMEA3138396	GCA_000212635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/212/635/GCA_000212635.2_ASM21263v2	-	MolK2
Sulfurospirillum sp. UCH001	1581011	PRJDB3361	270041	Proteobacteria	delta/epsilon subdivisions	2.60656	37.6	chromosome Unknown:NZ_AP014723.1/AP014723.1	-	1	2609	2532	2/17/15	4/11/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00023483	GCA_001548035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/035/GCA_001548035.1_ASM154803v1	25814615	UCH001
Burkholderia mallei	13373	PRJNA244020	244020	Proteobacteria	Betaproteobacteria	5.47935	68.5	-	JNUY01	2	5901	5317	9/4/15	4/4/17	Scaffold	Los Alamos National Laboratory	SAMN02836929	GCA_001279275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/275/GCA_001279275.1_BFN_8	26744368	Turkey1
Lysinibacillus fusiformis	28031	PRJNA253769	253769	Terrabacteria group	Firmicutes	4.84379	37.6	chromosome:NZ_CP010820.1/CP010820.1	-	1	4818	4566	2/10/15	4/11/17	Complete Genome	University of Malaya	SAMN02892976	GCA_000724775.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/775/GCA_000724775.3_ASM72477v3	25953192	RB-21
Streptococcus intermedius B196	862967	PRJNA50415	50415	Terrabacteria group	Firmicutes	1.99621	37.6	chromosome:NC_022246.1/CP003857.1	-	1	1967	1830	9/3/13	4/1/17	Complete Genome	"National Microbiology Laboratory, Public Health Agency of Canada"	SAMN02603659	GCA_000463355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/355/GCA_000463355.1_ASM46335v1	24341328	B196
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.30516	67	-	MUPR01	135	7917	7486	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001799	GCA_001991115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/115/GCA_001991115.1_ASM199111v1	-	VC2387
Lactobacillus reuteri	1598	PRJNA377666	377666	Terrabacteria group	Firmicutes	2.24803	38.4	-	NFKV01	105	2312	2074	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473632	GCA_002160565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/565/GCA_002160565.1_ASM216056v1	-	An166
Bacteroides fragilis str. 3725 D9(v)	1339298	PRJNA206141	206141	FCB group	Bacteroidetes/Chlorobi group	5.59598	43.2	-	JGDQ01	75	5127	4868	3/20/14	4/18/17	Contig	IGS	SAMN02317049	GCA_000598585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/585/GCA_000598585.1_ASM59858v1	-	3725 D9(v)
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.85018	50.6	-	CXLG01	407	5479	4696	7/16/15	2/24/17	Contig	SC	SAMEA2164639	GCA_001254455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/455/GCA_001254455.1_8290_4_92	-	124566
Streptococcus intermedius C270	862966	PRJNA50413	50413	Terrabacteria group	Firmicutes	1.96073	37.6	chromosome:NC_022237.1/CP003858.1	-	1	1943	1788	9/3/13	4/1/17	Complete Genome	"National Microbiology Laboratory, Public Health Agency of Canada"	SAMN02603658	GCA_000463385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/385/GCA_000463385.1_ASM46338v1	24341328	C270
Bacillus licheniformis	1402	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.22012	46.1	-	NPCX01	127	4370	4214	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372727	GCA_002271715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/715/GCA_002271715.1_assembly-7716_v1	-	7716
Vibrio vulnificus	672	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.02999	46.9	-	LORY01	3	4692	4231	12/21/15	4/4/17	Contig	US Food and Drug Administration 	SAMN03996332	GCA_001471415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/415/GCA_001471415.1_ASM147141v1	-	ATCC 29306
Pseudomonas syringae pv. solidagae	264458	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.98044	59.2	-	LJRH01	382	5387	4805	10/20/15	4/11/17	Scaffold	University of Toronto	SAMN03976256	GCA_001401055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/055/GCA_001401055.1_PsoICMP16925	-	ICMP16925
Streptococcus suis 14A	1214167	PRJNA171416	171416	Terrabacteria group	Firmicutes	2.34792	41.4	-	ALKW01	120	2320	2159	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469544	GCA_000440355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/355/GCA_000440355.1_version1	-	14A
Staphylococcus pseudintermedius ED99	984892	PRJNA62991	62991	Terrabacteria group	Firmicutes	2.57222	37.6	chromosome:NC_017568.1/CP002478.1	-	1	2426	2301	2/16/11	3/30/17	Complete Genome	University of Edinburgh	SAMN02604167	GCA_000189495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/495/GCA_000189495.1_ASM18949v1	21398539	ED99
Streptococcus gallolyticus UCN34	637909	PRJEA34729	34729	Terrabacteria group	Firmicutes	2.35091	37.6	chromosome:NC_013798.1/FN597254.1	-	1	2342	2209	2/10/10	4/10/17	Complete Genome	Institut Pasteur	SAMEA2272396	GCA_000027185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/027/185/GCA_000027185.1_ASM2718v1	20139183	UCN34
Caldanaerobacter subterraneus subsp. tengcongensis MB4	273068	PRJNA249	249	Terrabacteria group	Firmicutes	2.68945	37.6	chromosome:NC_003869.1/AE008691.1	-	1	2680	2490	10/7/01	4/6/17	Complete Genome	Beijing Center.HGP	SAMN02603009	GCA_000007085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/085/GCA_000007085.1_ASM708v1	11997336	MB4
Fusobacterium nucleatum subsp. polymorphum	76857	PRJNA386424	386424	Fusobacteria	Fusobacteriia	2.52364	26.9	-	NHRT01	3	2457	2293	6/21/17	6/24/17	Scaffold	Chosun University	SAMN06947082	GCA_002204435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/435/GCA_002204435.1_ASM220443v1	-	KCOM 1001
Bifidobacterium longum subsp. infantis	1682	PRJEB7117	270920	Terrabacteria group	Actinobacteria	2.79152	59.8	-	CCWR01	50	2648	2404	12/19/14	4/3/17	Contig	CHUV-UNIL	SAMEA2747189	GCA_000825125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/125/GCA_000825125.1_BIB1401272845a.V1	-	BIB1401272845a
Shigella flexneri 2a	42897	PRJNA278281	278281	Proteobacteria	Gammaproteobacteria	4.62474	50.4	-	LAHZ01	388	5207	4380	6/1/15	3/5/17	Contig	U.S. Food and Drug Administration	SAMN03418662	GCA_001017285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/285/GCA_001017285.1_ASM101728v1	25980352	BS1025
Leuconostoc mesenteroides subsp. mesenteroides	33967	PRJNA299363	299363	Terrabacteria group	Firmicutes	2.1241	37.5981	chromosome:NZ_CP013016.1/CP013016.1; plasmid pDSK1:NZ_CP013017.1/CP013017.1; plasmid pDSK2:NZ_CP014602.1/CP014602.1; plasmid pDSK3:NZ_CP014603.1/CP014603.1; plasmid pDSK4:NZ_CP014604.1/CP014604.1	-	5	2121	1966	3/2/17	3/4/17	Complete Genome	"Chung-Ang University, Department of Life Science, 84 Heukseok-Ro, Dongjak-Gu, Seoul, South Korea "	SAMN04198273	GCA_002009375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/375/GCA_002009375.1_ASM200937v1	-	DRC0211
Pseudomonas putida KG-4	1410521	PRJNA223514	223514	Proteobacteria	Gammaproteobacteria	5.58691	63	-	AYRY01	91	5171	4978	5/1/15	4/3/17	Contig	Centre for Cellular and Molecular Biology (CSIR-CCMB)	SAMN02380720	GCA_000987155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/987/155/GCA_000987155.1_ASM98715v1	26044433	KG-4
Leptospira interrogans str. UI 12621	1049937	PRJNA74115	74115	Spirochaetes	Spirochaetia	4.98162	35.1	-	AHNQ02	59	4498	4042	1/24/12	5/18/17	Contig	J. Craig Venter Institute	SAMN02436582	GCA_000244275.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/275/GCA_000244275.3_gls454104v2.0	-	UI 12621
Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069	990317	PRJEA63179	63179	Terrabacteria group	Firmicutes	2.37721	37.5974	chromosome:NC_015215.1/FR824043.1; plasmid pSGG1:NC_015219.1/FR824044.1	-	2	2379	2220	3/3/11	3/30/17	Complete Genome	Herz- und Diabeteszentrum Nordrhein-Westfalen Universitätsklinik der Ruhr-Universität Bochum	SAMEA2272408	GCA_000203195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/203/195/GCA_000203195.1_ASM20319v1	21824414	ATCC BAA-2069
Leuconostoc mesenteroides subsp. suionicum	1511761	PRJNA318320	318320	Terrabacteria group	Firmicutes	2.04883	37.5936	chromosome:NZ_CP015247.1/CP015247.1; plasmid unnamed:NZ_CP015248.1/CP015248.1	-	2	2059	1921	12/8/16	4/6/17	Complete Genome	Chung-Ang University	SAMN04811211	GCA_001891125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/125/GCA_001891125.1_ASM189112v1	-	DSM 20241
Enterococcus faecium	1352	PRJNA358851	358851	Terrabacteria group	Firmicutes	3.28073	37.5927	chromosome:NZ_CP019208.1/CP019208.1; plasmid unnamed1:NZ_CP019209.1/CP019209.1; plasmid unnamed2:NZ_CP019210.1/CP019210.1; plasmid unnamed3:NZ_CP019211.1/CP019211.1; plasmid unnamed4:NZ_CP019212.1/CP019212.1	-	5	3381	3115	2/28/17	3/29/17	Complete Genome	Asia Pacific Foundation for Infectious Diseases (APFID)	SAMN06186500	GCA_002007625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/625/GCA_002007625.1_ASM200762v1	-	2014-VREF-41
Streptococcus pneumoniae PCS8235	1159083	PRJNA89169	89169	Terrabacteria group	Firmicutes	2.07653	39.5888	chromosome:NZ_CM001835.1/CM001835.1; plasmid pPCS8235:NZ_CM001836.1/CM001836.1	ALJW01	2	2284	2011	3/22/13	3/9/17	Chromosome	Washington University	SAMN02436861	GCA_000348705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/705/GCA_000348705.1_ASM34870v1	-	PCS8235
Virgibacillus sp. SK37	403957	PRJNA230994	230994	Terrabacteria group	Firmicutes	3.84173	37.5904	chromosome:NZ_CP007161.1/CP007161.1; plasmid pSK37042:NZ_CP007162.1/CP007162.1; plasmid pSK37064:NZ_CP007163.1/CP007163.1; plasmid pSK37387:NZ_CP007164.1/CP007164.1	-	4	3845	3683	7/14/14	4/17/17	Complete Genome	Suranaree University of Technology	SAMN03081529	GCA_000725285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/285/GCA_000725285.1_ASM72528v1	-	SK37
Streptococcus macedonicus ACA-DC 198	1116231	PRJEA76965	76965	Terrabacteria group	Firmicutes	2.14276	37.5846	chromosome:NC_016749.1/HE613569.1; plasmid pSMA198:NC_016750.1/HE613570.1	-	2	2160	1812	1/16/12	4/7/17	Complete Genome	"Agricultural University of Athens, Greece"	SAMEA2272145	GCA_000283635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/635/GCA_000283635.1_ASM28363v1	"2,240,824,124,713,040"	ACA-DC 198
Haemophilus influenzae	727	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.82582	38.1	-	JWEN01	67	1811	1709	7/10/15	3/26/17	Contig	University of Washington	SAMN03197021	GCA_001053795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/795/GCA_001053795.1_ASM105379v1	26230489	1057_HINF
Prochlorococcus marinus str. MIT 1312	1801621	PRJNA311918	311918	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.5615	50.5	-	LVHM01	53	2696	2656	4/25/16	4/25/16	Contig	MIT	SAMN04490358	GCA_001632005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/005/GCA_001632005.1_ASM163200v1	-	MIT 1312
Mycobacterium bovis	1765	PRJNA214551	214551	Terrabacteria group	Actinobacteria	4.32005	65.5	-	JQEP01	72	4266	4026	9/8/14	4/2/17	Contig	South American Mycobacterium bovis WGS	SAMN02902637	GCA_000749785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/785/GCA_000749785.1_ASM74978v1	-	45-08B
Mycobacterium avium subsp. hominissuis 10-4249	1391990	PRJNA216923	216923	Terrabacteria group	Actinobacteria	4.78663	69.2	-	AYNQ01	924	4843	3750	12/9/13	4/2/17	Contig	National Animal Disease Center	SAMN02470586	GCA_000504765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/765/GCA_000504765.1_MAH_4249_version_1	-	Oct-49
Clostridium perfringens	1502	PRJNA327446	327446	Terrabacteria group	Firmicutes	3.66064	28	-	MARU01	67	3390	3198	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323896	GCA_001949545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/545/GCA_001949545.1_ASM194954v1	28062388	JFP916
Xanthomonas campestris	339	PRJNA283309	283309	Proteobacteria	Gammaproteobacteria	5.14414	65.4	-	LHBT01	205	4492	4155	8/11/15	4/4/17	Contig	FDA	SAMN03897578	GCA_001264465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/465/GCA_001264465.1_CFSAN033086	26450732	CFSAN033086
Lactococcus lactis subsp. lactis bv. diacetylactis str. LD61	1408260	PRJNA222498	222498	Terrabacteria group	Firmicutes	2.59924	35	-	AXZK01	132	2751	2515	10/30/13	4/2/17	Contig	"Geneva University Hospitals, Genomic Research Laboratory."	SAMN02370934	GCA_000488975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/975/GCA_000488975.1_LD61v1	24435871	LD61
Streptococcus infantarius subsp. infantarius CJ18	1069533	PRJNA70717	70717	Terrabacteria group	Firmicutes	2.00825	37.5743	chromosome:NC_016826.1/CP003295.1; plasmid pSICJ18-1:NC_016837.1/CP003296.1	-	2	2066	1756	2/6/12	4/7/17	Complete Genome	"Laboratory of Food Biotechnology ETH Zurich, Switzerland"	SAMN02603507	GCA_000246835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/835/GCA_000246835.1_ASM24683v1	22461547	CJ18
Staphylococcus epidermidis NIH05003	1155133	PRJNA86761	86761	Terrabacteria group	Firmicutes	2.41226	32.1	-	AKHI01	66	2396	2226	7/9/12	3/23/17	Contig	NIH-NISC	SAMN00993648	GCA_000276025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/025/GCA_000276025.1_ASM27602v1	-	NIH05003
[Eubacterium] eligens ATCC 27750	515620	PRJNA29073	29073	Terrabacteria group	Firmicutes	2.83139	37.567	chromosome:NC_012778.1/CP001104.1; plasmid unnamed:NC_012782.1/CP001105.1; plasmid unnamed:NC_012780.1/CP001106.1	-	3	2723	2613	6/4/09	8/28/17	Complete Genome	"Center for Genome Sciences, Washington University School of Medicine"	SAMN02603083	GCA_000146185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/146/185/GCA_000146185.1_ASM14618v1	19321416	ATCC 27750
Yersinia pestis biovar Orientalis str. PEXU2	547046	PRJNA30509	30509	Proteobacteria	Gammaproteobacteria	4.77089	47.7	-	ACNS01	5	4542	4338	5/8/09	4/10/17	Scaffold	Enteropathogen Resource Integration Center (ERIC)	SAMN02403943	GCA_000182525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/182/525/GCA_000182525.1_ASM18252v1	-	PEXU2
Pseudomonas fluorescens LMG 5329	1324332	PRJNA198067	198067	Proteobacteria	Gammaproteobacteria	6.87002	60.5	-	ASGY01	253	6403	6216	6/14/13	4/1/17	Contig	"Centre of Microbial and Plant Genetics (CMPG), University of Leuven"	SAMN02146680	GCA_000411675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/675/GCA_000411675.1_Pse.Fluo1.0	23887909	LMG 5329
Enterococcus faecium	1352	PRJNA358851	358851	Terrabacteria group	Firmicutes	3.39217	37.5505	chromosome:NZ_CP019992.1/CP019992.1; plasmid p268-1:NZ_CP019993.1/CP019993.1; plasmid p268-2:NZ_CP019994.1/CP019994.1; plasmid p268-3:NZ_CP019995.1/CP019995.1	-	4	3526	3246	3/13/17	3/15/17	Complete Genome	Asia Pacific Foundation for Infectious Diseases (APFID)	SAMN06472830	GCA_002025045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/045/GCA_002025045.1_ASM202504v1	-	-
Enterococcus faecium	1352	PRJNA358851	358851	Terrabacteria group	Firmicutes	3.2552	37.5091	chromosome:NZ_CP019970.1/CP019970.1; plasmid p114-1:NZ_CP019971.1/CP019971.1; plasmid p114-2:NZ_CP019972.1/CP019972.1; plasmid p114-3:NZ_CP019973.1/CP019973.1; plasmid p114-4:NZ_CP019974.1/CP019974.1; plasmid p114-5:NZ_CP019975.1/CP019975.1; plasmid p114-6:NZ_CP019976.1/CP019976.1	-	7	3386	3067	3/9/17	3/14/17	Complete Genome	Asia Pacific Foundation for Infectious Diseases (APFID)	SAMN06463381	GCA_002024245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/245/GCA_002024245.1_ASM202424v1	-	-
Prevotella sp. oral taxon 299 str. F0039	575614	PRJNA40047	40047	FCB group	Bacteroidetes/Chlorobi group	2.48027	37.5003	chromosome:NC_022124.1/CP003666.1; plasmid unnamed:NC_022111.1/CP003667.1	-	2	2009	1912	8/21/13	4/17/17	Complete Genome	Broad Institute	SAMN02463807	GCA_000163055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/055/GCA_000163055.2_ASM16305v2	-	F0039
Taylorella equigenitalis	29575	PRJNA384636	384636	Proteobacteria	Betaproteobacteria	1.66629	37.5	chromosome:NZ_CP021060.1/CP021060.1	-	1	1535	1458	9/8/17	9/11/17	Complete Genome	USDA	SAMN06843504	GCA_002288025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/025/GCA_002288025.1_ASM228802v1	-	92-0972
Taylorella equigenitalis	29575	PRJNA385665	385665	Proteobacteria	Betaproteobacteria	1.69204	37.5	chromosome:NZ_CP021246.1/CP021246.1	-	1	1566	1487	9/8/17	9/11/17	Complete Genome	USDA APHIS VS NVSL	SAMN06929898	GCA_002288245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/245/GCA_002288245.1_ASM228824v1	-	98-0554
Pasteurella dagmatis	754	PRJEB6403	251923	Proteobacteria	Gammaproteobacteria	2.28721	37.5	chromosome 1:NZ_LT906448.1/LT906448.1	-	1	2098	2000	8/15/17	8/28/17	Complete Genome	SC	SAMEA4362423	GCA_900186835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/835/GCA_900186835.1_49950_F01	-	NCTC11617
Pseudomonas fluorescens EGD-AQ6	1390371	PRJNA215963	215963	Proteobacteria	Gammaproteobacteria	6.08626	60.5	-	AVQG01	58	5651	5514	9/11/13	4/2/17	Contig	National Environmental Engineering Research Institute-CSIR	SAMN02469684	GCA_000465595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/595/GCA_000465595.1_GS_De_Novo_Assembly	-	EGD-AQ6
Yersinia pestis Pestoides A	545431	PRJNA30511	30511	Proteobacteria	Gammaproteobacteria	4.75061	47.6	-	ACNT01	37	4517	4201	5/8/09	5/19/17	Scaffold	ERIC (Enteropathogen Resource Integration Center)	SAMN02403944	GCA_000182545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/182/545/GCA_000182545.1_ASM18254v1	-	Pestoides A
Staphylococcus pseudintermedius	283734	PRJNA319397	319397	Terrabacteria group	Firmicutes	2.73111	37.5	chromosome:NZ_CP016073.1/CP016073.1	-	1	2657	2405	7/8/16	4/10/17	Complete Genome	University of Tennessee	SAMN05181827	GCA_001682435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/435/GCA_001682435.2_ASM168243v2	-	81661
Staphylococcus epidermidis NIH06004	1155134	PRJNA86763	86763	Terrabacteria group	Firmicutes	2.61684	32.1	-	AKHH01	76	2618	2418	7/9/12	3/23/17	Contig	NIH-NISC	SAMN00993391	GCA_000276045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/045/GCA_000276045.1_ASM27604v1	-	NIH06004
Lactobacillus heilongjiangensis	1074467	PRJNA258033	258033	Terrabacteria group	Firmicutes	2.79055	37.5	chromosome:NZ_CP012559.1/CP012559.1	-	1	2492	2391	8/31/15	4/11/17	Complete Genome	Zhejiang University	SAMN02983013	GCA_000831645.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/645/GCA_000831645.3_ASM83164v3	-	DSM 28069
Lactococcus lactis subsp. cremoris HP	1295827	PRJNA189984	189984	Terrabacteria group	Firmicutes	2.26951	35.6	-	JAUH01	213	2353	2030	2/3/14	4/2/17	Contig	"AgResearch, Grasslands Research Institute"	SAMN02952974	GCA_000534815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/815/GCA_000534815.1_HPAssemblyV1	24604643	HP
Xanthomonas campestris	339	PRJNA283309	283309	Proteobacteria	Gammaproteobacteria	5.10426	65.5	-	LHBU01	215	4434	4120	8/11/15	4/4/17	Contig	FDA	SAMN03897579	GCA_001266515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/515/GCA_001266515.1_CFSAN033087	-	CFSAN033087
Clostridium perfringens	1502	PRJNA327447	327447	Terrabacteria group	Firmicutes	3.60177	28	-	MARV01	78	3318	3144	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323897	GCA_001949565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/565/GCA_001949565.1_ASM194956v1	28062388	JFP921
Mycobacterium avium subsp. paratuberculosis 10-4404	1391997	PRJNA216936	216936	Terrabacteria group	Actinobacteria	4.81436	69.3	-	AYNR01	546	4771	3539	12/9/13	4/2/17	Contig	National Animal Disease Center	SAMN02470587	GCA_000504785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/785/GCA_000504785.1_MAP_4404_version_1	-	Oct-04
Mycobacterium bovis	1765	PRJNA214551	214551	Terrabacteria group	Actinobacteria	4.33454	65.6	-	JQEO01	56	4252	4028	9/8/14	4/2/17	Contig	South American Mycobacterium bovis WGS	SAMN02902636	GCA_000749805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/805/GCA_000749805.1_ASM74980v1	-	09-1192
Prochlorococcus marinus str. MIT 1318	1801622	PRJNA311921	311921	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.58474	50	-	LVHO01	27	2665	2627	4/25/16	4/25/16	Contig	MIT	SAMN04490361	GCA_001632045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/045/GCA_001632045.1_ASM163204v1	-	MIT 1318
Haemophilus influenzae	727	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.83611	37.9	-	JWEJ01	81	1805	1699	7/10/15	3/26/17	Contig	University of Washington	SAMN03197025	GCA_001053815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/815/GCA_001053815.1_ASM105381v1	26230489	1061_HINF
Ornithobacterium rhinotracheale ORT-UMN 88	1401325	PRJNA219465	219465	FCB group	Bacteroidetes/Chlorobi group	2.39787	37.5	chromosome:NZ_CP006828.1/CP006828.1	-	1	2307	2205	9/22/14	4/9/17	Complete Genome	National Animal Disease Center	SAMN02358229	GCA_000756505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/505/GCA_000756505.1_ASM75650v1	-	ORT-UMN 88
Enterococcus faecalis DENG1	1287066	PRJNA187445	187445	Terrabacteria group	Firmicutes	2.96104	37.5	chromosome:NZ_CP004081.1/CP004081.1	-	1	3050	2881	2/5/14	3/24/17	Complete Genome	The Affiliated Shenzhen Nanshan Hospital of Guangdong Medical College	SAMN03081447	GCA_000550745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/745/GCA_000550745.1_ASM55074v1	24800692	DENG1
Streptococcus pneumoniae PCS8106	1159081	PRJNA89165	89165	Terrabacteria group	Firmicutes	2.13617	39.5	-	AKQV01	45	2393	2055	1/29/13	3/9/17	Scaffold	Washington University	SAMN02299518	GCA_000334535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/535/GCA_000334535.1_ASM33453v1	-	PCS8106
Tepidanaerobacter acetatoxydans Re1	1209989	PRJEB1140	184009	Terrabacteria group	Firmicutes	2.76125	37.5	chromosome:NC_019954.2/HF563609.2	-	1	2685	2553	12/18/12	4/9/17	Complete Genome	HGEN	SAMEA2272437	GCA_000328765.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/765/GCA_000328765.2_ASM32876v2	23469343	Re1
Fervidicoccus fontis Kam940	1163730	PRJNA91117	91117	TACK group	Crenarchaeota	1.31921	37.5	chromosome:CP003423.1	-	1	1439	1385	4/10/12	4/17/14	Complete Genome	Centre Bioengineering RAS	SAMN02603095	GCA_000258425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/425/GCA_000258425.1_ASM25842v1	-	Kam940
Streptococcus gallolyticus subsp. gallolyticus ATCC 43143	981539	PRJDA62517	62517	Terrabacteria group	Firmicutes	2.36224	37.5	chromosome:NC_017576.1/AP012053.1	-	1	2356	2233	5/28/11	3/30/17	Complete Genome	"Yang-Ming Genome Sequencing Center, National Yang-Ming University"	SAMD00060983	GCA_000270145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/145/GCA_000270145.1_ASM27014v1	21633709	ATCC 43143
Leptospira interrogans str. UI 12758	1049938	PRJNA74117	74117	Spirochaetes	Spirochaetia	5.10203	35.1	-	AHNR02	83	4725	4281	1/24/12	5/18/17	Contig	J. Craig Venter Institute	SAMN02436378	GCA_000244295.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/295/GCA_000244295.3_gls454105v2.0	-	UI 12758
Pseudomonas putida	303	PRJNA267498	267498	Proteobacteria	Gammaproteobacteria	6.81706	60	-	JTEN01	146	6226	5986	5/12/15	4/3/17	Contig	The University of Texas at Austin	SAMN03196557	GCA_001006135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/135/GCA_001006135.1_ASM100613v1	26067973	CBB5
Tepidanaerobacter acetatoxydans Re1	1209989	PRJNA50697	50697	Terrabacteria group	Firmicutes	2.75987	37.5	chromosome:NC_015519.1/CP002728.1	-	1	2681	2572	5/12/11	4/7/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713617	GCA_000213235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/235/GCA_000213235.1_ASM21323v1	-	Re1
Shigella flexneri 2a	42897	PRJNA278281	278281	Proteobacteria	Gammaproteobacteria	4.54901	50.5	-	LAID01	401	5127	4296	6/1/15	3/5/17	Contig	U.S. Food and Drug Administration	SAMN03420875	GCA_001017295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/295/GCA_001017295.1_ASM101729v1	25980352	BS1044
Bifidobacterium longum subsp. infantis	1682	PRJEB7117	270920	Terrabacteria group	Actinobacteria	2.78684	59.8	-	CCWT01	56	2660	2405	12/19/14	4/2/17	Contig	CHUV-UNIL	SAMEA2747190	GCA_000825145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/145/GCA_000825145.1_BIB1401272845b.V1	-	BIB1401272845b
Hippea maritima DSM 10411	760142	PRJNA48195	48195	Proteobacteria	delta/epsilon subdivisions	1.69443	37.5	chromosome:NC_015318.1/CP002606.1	-	1	1785	1703	3/29/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713597	GCA_000194135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/135/GCA_000194135.1_ASM19413v1	21886857	DSM 10411
Staphylococcus pseudintermedius HKU10-03	937773	PRJNA61283	61283	Terrabacteria group	Firmicutes	2.61738	37.5	chromosome:NC_014925.1/CP002439.1	-	1	2517	2384	1/7/11	3/30/17	Complete Genome	The University of Hong Kong	SAMN02603958	GCA_000185885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/885/GCA_000185885.1_ASM18588v1	21278300	HKU10-03
Rivularia sp. PCC 7116	373994	PRJNA63147	63147	Terrabacteria group	Cyanobacteria/Melainabacteria group	8.72877	37.4958	chromosome:NC_019678.1/CP003549.1; plasmid pRIV7116.01:NC_019679.1/CP003550.1; plasmid pRIV7116.02:NC_019686.1/CP003551.1	-	3	6790	6526	12/4/12	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02232049	GCA_000316665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/665/GCA_000316665.1_ASM31666v1	-	PCC 7116
Jeotgalibaca dankookensis	708126	PRJNA362679	362679	Terrabacteria group	Firmicutes	2.1165	37.4372	chromosome:NZ_CP019728.1/CP019728.1; plasmid unnamed:NZ_CP019729.1/CP019729.1	-	2	2101	1959	2/21/17	2/24/17	Complete Genome	Kyung Hee University	SAMN06241153	GCA_002005405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/405/GCA_002005405.1_ASM200540v1	24554638	EX-07
Streptococcus suis 161_00P5	1214150	PRJNA171417	171417	Terrabacteria group	Firmicutes	2.26721	41.4	-	ALKX01	106	2246	2075	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469528	GCA_000440375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/375/GCA_000440375.1_version1	-	161_00P5
Pseudomonas syringae pv. spinaceae	264459	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	6.0387	58.3	-	LJRI01	1657	6352	4960	10/20/15	3/27/17	Scaffold	University of Toronto	SAMN03976304	GCA_001401065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/065/GCA_001401065.1_PspICMP16929	-	ICMP16929
Vibrio vulnificus	672	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.04825	46.7	-	LOSH01	4	4808	4477	12/21/15	4/4/17	Contig	US Food and Drug Administration 	SAMN03996333	GCA_001471465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/465/GCA_001471465.1_ASM147146v1	-	ATCC 29307
Bacillus licheniformis	1402	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.28104	45.9	-	NPCW01	74	4473	4329	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372726	GCA_002271725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/725/GCA_002271725.1_assembly-7715_v1	-	7715
Enterococcus faecalis D32	1206105	PRJNA169860	169860	Terrabacteria group	Firmicutes	3.0625	37.4365	chromosome:NC_018221.1/CP003726.1; plasmid EFD32pA:NC_018222.1/CP003727.1; plasmid EFD32pB:NC_018223.1/CP003728.1	-	3	3174	2973	7/24/12	3/23/17	Complete Genome	Robert Koch Institute	SAMN02603765	GCA_000281195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/195/GCA_000281195.1_ASM28119v1	22965105	D32
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.7005	50.8	-	CXII01	385	5272	4513	7/17/15	2/24/17	Contig	SC	SAMEA2004847	GCA_001254995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/995/GCA_001254995.1_8289_7_68	-	83589
Bacteroides fragilis str. 3783N1-8	1339311	PRJNA206154	206154	FCB group	Bacteroidetes/Chlorobi group	5.94213	43.4	-	JGDR01	85	5338	5009	3/20/14	4/18/17	Contig	IGS	SAMN02314531	GCA_000598605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/605/GCA_000598605.1_ASM59860v1	-	3783N1-8
Lactobacillus reuteri	1598	PRJNA289613	289613	Terrabacteria group	Firmicutes	2.0636	38.8	-	NHMT01	3	1983	1803	7/19/17	7/21/17	Contig	Max von Pettenkofer-Institut	SAMN03854115	GCA_002221655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/655/GCA_002221655.1_ASM222165v1	-	I49
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.13096	67	-	MUQA01	118	7804	7379	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001808	GCA_001991135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/135/GCA_001991135.1_ASM199113v1	-	VC6581
Virgibacillus halodenitrificans	1482	PRJNA351727	351727	Terrabacteria group	Firmicutes	3.91776	37.4304	chromosome:NZ_CP017962.1/CP017962.1; plasmid unnamed1:NZ_CP017963.1/CP017963.1	-	2	3867	3729	11/14/16	4/16/17	Complete Genome	East China University of Science and Technology	SAMN05953463	GCA_001878675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/675/GCA_001878675.1_ASM187867v1	-	PDB-F2
Staphylococcus muscae	1294	PRJEB6403	251923	Terrabacteria group	Firmicutes	2.09512	37.4	chromosome 1:NZ_LT906464.1/LT906464.1	-	1	2074	1964	8/15/17	8/28/17	Complete Genome	SC	SAMEA4412661	GCA_900187005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/005/GCA_900187005.1_50569_B01	-	NCTC13833
Burkholderia mallei	13373	PRJNA244053	244053	Proteobacteria	Betaproteobacteria	5.50374	68.4	-	JNUZ01	15	5973	5317	9/4/15	4/4/17	Scaffold	Los Alamos National Laboratory	SAMN02837870	GCA_001279325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/325/GCA_001279325.1_BMU	26744368	Turkey2
Bacillus thuringiensis serovar kurstaki	29339	PRJNA238238	238238	Terrabacteria group	Firmicutes	6.85947	34.8925	chromosome:NZ_CP010005.1/CP010005.1; plasmid unnamed1:NZ_CP009998.1/CP009998.1; plasmid unnamed10:NZ_CP010010.1/CP010010.1; plasmid unnamed11:NZ_CP010009.1/CP010009.1; plasmid unnamed12:NZ_CP010007.1/CP010007.1; plasmid unnamed13:NZ_CP010011.1/CP010011.1; plasmid unnamed14:NZ_CP010008.1/CP010008.1; plasmid unnamed2:NZ_CP009999.1/CP009999.1; plasmid unnamed3:NZ_CP010000.1/CP010000.1; plasmid unnamed4:NZ_CP010001.1/CP010001.1; plasmid unnamed5:NZ_CP010002.1/CP010002.1; plasmid unnamed6:NZ_CP010003.1/CP010003.1; plasmid unnamed7:NZ_CP010006.1/CP010006.1; plasmid unnamed8:NZ_CP010004.1/CP010004.1; plasmid unnamed9:NZ_CP010012.1/CP010012.1	-	15	7261	6751	2/10/15	4/10/17	Chromosome	Los Alamos National Laboratory	SAMN03216682	GCA_000835235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/835/235/GCA_000835235.1_ASM83523v1	25931591	HD 1
Ralstonia solanacearum FJAT-91	1130829	PRJNA80751	80751	Proteobacteria	Betaproteobacteria	5.40714	66.5	-	AHIY01	1322	5205	4309	1/16/13	5/19/17	Contig	"Fujian Academy of Agricultural Sciences, Fuzhou, Fujian, PR China"	SAMN02469793	GCA_000331875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/875/GCA_000331875.1_FJAT-91	-	FJAT-91
Vibrio cholerae NCTC 8457	417399	PRJNA18497	18497	Proteobacteria	Gammaproteobacteria	4.08209	47.4	-	AAWD01	203	4045	3593	1/3/07	3/22/17	Scaffold	TIGR	SAMN02435855	GCA_000153945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/945/GCA_000153945.1_ASM15394v1	-	NCTC 8457
Clostridioides difficile E24	1215072	PRJEB202	222744	Terrabacteria group	Firmicutes	4.01013	28.4	-	CAMP01	63	3669	3553	10/14/13	3/15/17	Scaffold	LPBA	SAMEA3138905	GCA_000531315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/315/GCA_000531315.1_E24	24482682	E24
Streptococcus salivarius	1304	PRJNA267549	267549	Terrabacteria group	Firmicutes	7.7025	52	-	JUNV01	1120	-	-	7/10/15	7/13/16	Contig	University of Washington	SAMN03198131	GCA_001075325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/325/GCA_001075325.1_ASM107532v1	26230489	918_SSAL
Shigella boydii	621	PRJNA293198	293198	Proteobacteria	Gammaproteobacteria	4.54744	50.7	-	LPSW01	468	5191	4278	12/15/16	2/26/17	Contig	"University of Maryland, School of Medicine"	SAMN04001713	GCA_001906435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/435/GCA_001906435.1_ASM190643v1	-	102265
Francisella tularensis subsp. novicida GA99-3548	442346	PRJNA19573	19573	Proteobacteria	Gammaproteobacteria	1.85864	32.5	-	ABAH01	5	1792	1669	5/31/07	3/30/17	Scaffold	Broad Institute	SAMN02595218	GCA_000154265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/265/GCA_000154265.1_ASM15426v1	-	GA99-3548
Brucella abortus bv. 1 str. NI435a	1051055	PRJNA74321	74321	Proteobacteria	Alphaproteobacteria	3.30304	57.2	-	AGVF01	3	3401	3159	2/3/12	3/23/17	Scaffold	Broad Institute	SAMN02596739	GCA_000245835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/835/GCA_000245835.1_Bruc_abor_bv1_NI435a_V1	-	NI435a
Yersinia pseudotuberculosis	633	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.61712	47.5	-	CWJN01	179	4260	3997	7/8/15	4/3/17	Scaffold	SC	SAMEA859931	GCA_001244855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/855/GCA_001244855.1_4840_7_12	-	SP93422
Lactobacillus delbrueckii subsp. bulgaricus	1585	PRJNA316692	316692	Terrabacteria group	Firmicutes	1.74252	49.9	-	LVWY01	56	1804	1578	4/20/16	4/5/17	Scaffold	Chr. Hansen A/S	SAMN04589663	GCA_001624925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/624/925/GCA_001624925.1_ASM162492v1	-	Lb1-GS-1
Xanthomonas citri pv. glycines CFBP 2526	1365648	PRJNA212247	212247	Proteobacteria	Gammaproteobacteria	5.25324	64.6655	chromosome:NZ_CM002268.1/CM002268.1; plasmid unnamed1:NZ_CM002269.1/CM002269.1; plasmid unnamed2:NZ_CM002270.1/CM002270.1	AUWO01	4	4779	4400	10/30/13	4/2/17	Chromosome	INRA	SAMN02469936	GCA_000495275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/275/GCA_000495275.1_Xag-CFBP2526-G1	24336374	CFBP 2526
Campylobacter fetus subsp. venerealis cfvi97/532	1273270	PRJNA184004	184004	Proteobacteria	delta/epsilon subdivisions	1.95553	33	-	LRER01	125	2041	1912	8/5/16	4/5/17	Contig	Utrecht University	SAMN04419559	GCA_001699635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/635/GCA_001699635.1_ASM169963v1	27333878	cfvi97/532
Xanthomonas oryzae pv. oryzae	64187	PRJNA269396	269396	Proteobacteria	Gammaproteobacteria	4.28747	63.9	-	JXDS01	442	4275	3466	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252495	GCA_001927475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/475/GCA_001927475.1_ASM192747v1	-	BXO34
Oenococcus oeni IOEB_C28	1428424	PRJNA229550	229550	Terrabacteria group	Firmicutes	1.80486	37.9	-	AZLE01	130	1854	1625	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02904287	GCA_000761965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/965/GCA_000761965.1_Oeoe_IOEB_C28_1.0	24901216	IOEB_C28
Streptococcus mitis	28037	PRJNA304678	304678	Terrabacteria group	Firmicutes	2.03811	39.7	-	NCVN01	85	2122	1908	4/18/17	4/21/17	Contig	Slagelse Hospital	SAMN06705595	GCA_002096925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/925/GCA_002096925.1_ASM209692v1	27325438	B_009152_10
Vibrio parahaemolyticus VPTS-2010_2	1238220	PRJNA176655	176655	Proteobacteria	Gammaproteobacteria	5.07487	45.3	-	JDFO01	95	5139	4431	3/4/14	3/18/17	Scaffold	IGS	SAMN01940373	GCA_000593365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/365/GCA_000593365.2_vpVPTS20102	-	VPTS-2010_2
Histophilus somni	731	PRJNA281531	281531	Proteobacteria	Gammaproteobacteria	2.18339	37.4	chromosome:NZ_CP018803.1/CP018803.1	-	1	2008	1877	5/31/17	6/2/17	Complete Genome	USDA-ARS-USMARC	SAMN06141920	GCA_002162195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/195/GCA_002162195.1_ASM216219v1	-	USDA-ARS-USMARC-63255
Lactobacillus casei	1582	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.78883	46.4	-	JUQW01	236	2879	2636	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03198052	GCA_001066565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/565/GCA_001066565.1_ASM106656v1	26230489	844_LCAS
Salinispora arenicola CNB527	1137250	PRJNA169705	169705	Terrabacteria group	Actinobacteria	5.98145	69.3	-	AZXI01	120	5463	4873	1/3/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02597265	GCA_000515175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/175/GCA_000515175.1_ASM51517v1	-	CNB527
Histophilus somni	731	PRJNA281531	281531	Proteobacteria	Gammaproteobacteria	2.1835	37.4	chromosome:NZ_CP018804.1/CP018804.1	-	1	2011	1883	5/31/17	6/2/17	Complete Genome	USDA-ARS-USMARC	SAMN06141917	GCA_002162215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/215/GCA_002162215.1_ASM216221v1	-	USDA-ARS-USMARC-63368
Clostridium botulinum	1491	PRJNA290143	290143	Terrabacteria group	Firmicutes	2.9372	27.9	-	LHYU01	146	2806	2686	8/12/15	3/26/17	Scaffold	Anses	SAMN03876604	GCA_001266965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/965/GCA_001266965.1_ASM126696v1	26430029	69285-CD
Borrelia burgdorferi IPT71	1408873	PRJNA223339	223339	Spirochaetes	Spirochaetia	0.777977	28.1	-	AYBW01	640	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378840	GCA_000501995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/501/995/GCA_000501995.1_BorBurgIPT71	-	IPT71
Treponema pallidum subsp. pallidum	161	PRJNA322283	322283	Spirochaetes	Spirochaetia	1.13914	52.8	chromosome:NZ_CP016068.1/CP016068.1	-	1	1066	1004	8/25/16	4/5/17	Chromosome	"National Institute of Health, Portugal"	SAMN05150677	GCA_001713315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/315/GCA_001713315.1_ASM171331v1	-	PT_SIF1299
Brucella suis F5/03-2	1169237	PRJNA173536	173536	Proteobacteria	Alphaproteobacteria	3.31612	57.2	-	AQNZ01	9	3379	3152	4/16/13	4/1/17	Contig	Broad Institute	SAMN00839733	GCA_000365585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/585/GCA_000365585.1_Bruc_suis_F5_03-2_V1	-	F5/03-2
Enterococcus faecalis TX0645	749510	PRJNA47175	47175	Terrabacteria group	Firmicutes	3.17461	37.1	-	AECE01	90	3304	3131	9/9/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189118	GCA_000148205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/205/GCA_000148205.1_ASM14820v1	-	TX0645
Streptococcus mutans TCI-218	1074159	PRJNA72061	72061	Terrabacteria group	Firmicutes	1.78937	37	-	AGLN01	136	1803	1712	10/6/11	3/22/17	Contig	JCVI	SAMN02436516	GCA_000229445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/445/GCA_000229445.2_SMUT6-NEX_8-218	-	TCI-218
Neisseria gonorrhoeae ATL_2011_01_03	1351780	PRJNA209479	209479	Proteobacteria	Betaproteobacteria	2.06727	52.5	-	ATQD01	326	2338	2103	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02338806	GCA_001025585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/585/GCA_001025585.1_ATL_2011_01_03	-	ATL_2011_01_03
"Enterococcus faecium 1,231,408"	565661	PRJNA32963	32963	Terrabacteria group	Firmicutes	3.08019	38.3	-	ACBB01	79	2991	2713	6/12/09	4/10/17	Scaffold	Broad Institute	SAMN02595272	GCA_000157615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/615/GCA_000157615.1_ASM15761v1	-	"1,231,408"
Chlamydia psittaci	83554	PRJNA312245	312245	PVC group	Chlamydiae	1.17629	39	-	LZSA01	10	1044	991	8/26/16	4/5/17	Scaffold	University of the Sunshine Coast	SAMN04496845	GCA_001714565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/565/GCA_001714565.1_ASM171456v1	-	Fr Da
Bacillus amyloliquefaciens	1390	PRJNA323667	323667	Terrabacteria group	Firmicutes	3.96275	45.6	-	LZZO01	36	4056	3883	7/18/16	4/5/17	Contig	Microbial Institute for Fermentation Industry	SAMN05185288	GCA_001687185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/185/GCA_001687185.1_ASM168718v1	-	SRCM101294
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.43565	66.3	-	JUQM01	302	4148	3981	7/10/15	3/26/17	Contig	University of Washington	SAMN03198062	GCA_001075175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/175/GCA_001075175.1_ASM107517v1	26230489	854_SMAL
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.13185	41.2	-	CVXY01	82	2055	1887	6/23/15	3/26/17	Contig	SC	SAMEA1032792	GCA_001175645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/645/GCA_001175645.1_6817_2_88	-	EQUI0041
Pasteurella multocida	747	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	2.17137	36.9	-	JVME01	30	2013	1936	7/10/15	4/11/17	Contig	University of Washington	SAMN03197498	GCA_001064415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/415/GCA_001064415.1_ASM106441v1	26230489	306_PMUL
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.84607	46.7	-	JUIH01	148	2913	2646	7/1/15	4/3/17	Contig	Wageningen University	SAMN03196652	GCA_001044025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/025/GCA_001044025.1_ASM104402v1	26048937	Lr108
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31462	57.1716	chromosome 1:NZ_CP018550.1/CP018550.1; chromosome 2:NZ_CP018551.1/CP018551.1	-	2	3382	3148	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932961	GCA_002191695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/695/GCA_002191695.1_ASM219169v1	28388689	BwIM_TUR_27
Histophilus somni	731	PRJNA281531	281531	Proteobacteria	Gammaproteobacteria	2.18344	37.4	chromosome:NZ_CP018805.1/CP018805.1	-	1	2013	1883	5/31/17	6/2/17	Complete Genome	USDA-ARS-USMARC	SAMN06141921	GCA_002162235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/235/GCA_002162235.1_ASM216223v1	-	USDA-ARS-USMARC-63369
Bordetella bronchiseptica E010	1458265	PRJNA237090	237090	Proteobacteria	Betaproteobacteria	5.1853	68.2	-	JGWW01	191	5067	4749	5/12/14	4/2/17	Contig	JCVI	SAMN02614580	GCA_000690235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/235/GCA_000690235.1_gbb69v01	25908122	E010
Sinorhizobium meliloti A0643DD	1194709	PRJNA167595	167595	Proteobacteria	Alphaproteobacteria	7.35191	61.9	-	AKZX01	678	7633	6125	8/13/12	5/19/17	Scaffold	University of Florence	SAMN02471763	GCA_000287575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/575/GCA_000287575.1_SMA0643DD_v1	23431003	A0643DD
Corynebacterium diphtheriae	1717	PRJNA341832	341832	Terrabacteria group	Actinobacteria	2.28564	53.4	-	MIYR01	82	2208	2023	11/10/16	8/24/17	Contig	National Institute for Communicable Diseases	SAMN05729432	GCA_001876195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/195/GCA_001876195.1_ASM187619v1	28726616	ST390-CPT-2015-46337
Histophilus somni	731	PRJNA281531	281531	Proteobacteria	Gammaproteobacteria	2.18342	37.4	chromosome:NZ_CP018806.1/CP018806.1	-	1	2010	1878	5/31/17	6/2/17	Complete Genome	USDA-ARS-USMARC	SAMN06141918	GCA_002162255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/255/GCA_002162255.1_ASM216225v1	-	USDA-ARS-USMARC-63370
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.63941	47.1	-	CWGK01	26	4344	4164	6/26/15	3/26/17	Contig	SC	SAMEA980168	GCA_001174965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/965/GCA_001174965.1_5749_7_1	-	YE177/02
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.1215	41.4	-	JJPT01	167	3536	3327	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708952	GCA_000979755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/755/GCA_000979755.1_gtlEnvA5udCFS	25756680	3.H.M.1A.1
Leuconostoc mesenteroides subsp. mesenteroides	33967	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.87513	37.7	-	MPLR01	110	1909	1690	4/14/17	4/17/17	Contig	Norwegian University of Life Sciences	SAMN05981506	GCA_002092775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/775/GCA_002092775.1_ASM209277v1	28217118	LN34
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.15645	39.9	-	FQLJ01	13	1036	938	5/10/17	5/24/17	Scaffold	WTSI	SAMEA1094343	GCA_900118915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/915/GCA_900118915.1_7067_6_72	-	09_01
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.68713	59.3	-	JUSU01	159	5499	5293	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198002	GCA_001067375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/375/GCA_001067375.1_ASM106737v1	26230489	790_SMAR
Lactobacillus plantarum CMPG5300	1304889	PRJNA193572	193572	Terrabacteria group	Firmicutes	3.50783	44.2157	chromosome:NZ_CM002918.1/CM002918.1; plasmid pCMPG5300.01:NZ_CM002919.1/CM002919.1; plasmid pCMPG5300.02:NZ_CM002920.1/CM002920.1; plasmid pCMPG5300.03:NZ_CM002921.1/CM002921.1	AXZV01	7	3418	3233	10/1/14	3/24/17	Chromosome	KU Leuven	SAMN03083641	GCA_000762955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/955/GCA_000762955.1_ASM76295v1	25395634	CMPG5300
Mannheimia haemolytica	75985	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.60458	41.1	-	LQER01	123	2673	2478	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366539	GCA_001929735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/735/GCA_001929735.1_ASM192973v1	-	2633MH
Campylobacter coli 1098	887291	PRJNA52719	52719	Proteobacteria	delta/epsilon subdivisions	1.74063	31.3	-	AIMW01	126	1810	1698	3/16/12	3/15/17	Contig	Cornell University	SAMN02428970	GCA_000253695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/695/GCA_000253695.2_ASM25369v2	-	1098
Burkholderia sp. USM B20	1571773	PRJNA267030	267030	Proteobacteria	Betaproteobacteria	7.71853	66.9	-	JTAN01	142	7139	6742	3/6/15	4/10/17	Contig	USM	SAMN03177436	GCA_000949135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/135/GCA_000949135.1_ASM94913v1	-	USM B20
Propionibacterium acnes HL020PA1	765065	PRJNA49161	49161	Terrabacteria group	Actinobacteria	2.47851	60	-	ADYO01	14	2498	2366	7/30/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189201	GCA_000144505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/505/GCA_000144505.1_ASM14450v1	-	HL020PA1
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.52216	32.7	-	CUFT01	67	2507	2362	3/31/15	3/26/17	Contig	SC	SAMEA1035121	GCA_001230645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/645/GCA_001230645.1_7068_7_28	-	109919
Proteus mirabilis	584	PRJNA395387	395387	Proteobacteria	Gammaproteobacteria	3.96084	38.6	-	NOWB01	62	3679	3500	8/22/17	8/24/17	Contig	Washington University	SAMN07376741	GCA_002265385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/385/GCA_002265385.1_ASM226538v1	-	PM185
Enterobacter cloacae BIDMC 8	1329846	PRJNA202010	202010	Proteobacteria	Gammaproteobacteria	4.88499	55.1	-	JCLF01	3	4836	4580	2/3/14	4/10/17	Scaffold	Broad Institute	SAMN02138629	GCA_000534455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/455/GCA_000534455.1_Ente_cloa_BIDMC_8_V2	-	BIDMC 8
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.98365	55.9	-	FKZM01	67	5793	5468	5/19/16	2/21/17	Scaffold	SC	SAMEA2273531	GCA_900083575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/575/GCA_900083575.1_12045_6_1	-	2880STDY5682446
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.59927	56.7	-	MCOE01	94	4534	4317	9/20/16	4/5/17	Contig	FDA/CFSAN	SAMN04329637	GCA_001735615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/735/615/GCA_001735615.1_Csak-MOD1-GK1025B	-	MOD1-GK1025B
Lactobacillus salivarius	1624	PRJNA357984	357984	Terrabacteria group	Firmicutes	1.92155	32.9	-	NBEA01	58	1868	1763	4/5/17	4/8/17	Scaffold	University College Cork	SAMN06163273	GCA_002079325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/325/GCA_002079325.1_ASM207932v1	-	NCIMB702343
Moraxella catarrhalis	480	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.91655	41.6	-	JVKY01	46	1795	1671	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197530	GCA_001064655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/655/GCA_001064655.1_ASM106465v1	26230489	339_MCAT
Mycobacterium abscessus 6G-0728-R	1001737	PRJNA65205	65205	Terrabacteria group	Actinobacteria	5.34183	64.1	-	AKUS01	8	5433	5322	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00717269	GCA_000270605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/605/GCA_000270605.1_ASM27060v1	-	6G-0728-R
Bifidobacterium breve	1685	PRJNA349793	349793	Terrabacteria group	Actinobacteria	2.27086	58.6	-	MNLA01	17	2006	1794	8/28/17	8/30/17	Contig	University of Parma	SAMN05933031	GCA_002271275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/275/GCA_002271275.1_Bbre7Ev1	28837128	7E
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.21686	36.7	-	LPSL01	19	2348	2200	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305172	GCA_001560645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/645/GCA_001560645.1_NG05B_CO5_05	-	NG05B_CO5_05
Vibrio sp. corallo1	1516159	PRJNA375722	375722	Proteobacteria	Gammaproteobacteria	5.44573	44.5	-	MVJD01	233	4855	4614	5/22/17	5/24/17	Contig	Universiti Teknologi Malaysia	SAMN06344317	GCA_002156455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/455/GCA_002156455.1_ASM215645v1	-	corallo1
Histophilus somni	731	PRJNA281531	281531	Proteobacteria	Gammaproteobacteria	2.18343	37.4	chromosome:NZ_CP018808.1/CP018808.1	-	1	2008	1879	5/31/17	6/2/17	Complete Genome	USDA-ARS-USMARC	SAMN06141922	GCA_002162295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/295/GCA_002162295.1_ASM216229v1	-	USDA-ARS-USMARC-63374
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.89145	63.7	-	DBBI01	67	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457231	GCA_002292085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/085/GCA_002292085.1_ASM229208v1	28894102	-
Aeromonas hydrophila	644	PRJNA320461	320461	Proteobacteria	Gammaproteobacteria	5.08689	60.8	-	LXME01	47	4730	4535	8/31/16	4/5/17	Contig	University of Chinese Academy of Sciences	SAMN04939662	GCA_001717755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/755/GCA_001717755.1_ASM171775v1	-	2JBN101
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.45534	67.4	-	LOYG01	88	6795	6443	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449289	GCA_001524785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/785/GCA_001524785.1_ASM152478v1	-	MSMB2045
Flavobacterium psychrophilum	96345	PRJEB21067	396411	FCB group	Bacteroidetes/Chlorobi group	2.64764	32.5	-	FYCO01	43	2400	2312	7/29/17	8/7/17	Contig	INRA	SAMEA104125751	GCA_900186545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/545/GCA_900186545.1_IT02_V1	-	IT02
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.80918	47.6	-	MEAE01	114	3562	3370	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320406	GCA_001883405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/405/GCA_001883405.1_ASM188340v1	-	00/2994
Pectobacterium carotovorum subsp. actinidiae	1507808	PRJNA354645	354645	Proteobacteria	Gammaproteobacteria	4.88695	51.5	-	MPUJ01	49	4353	4134	2/3/17	4/6/17	Scaffold	Plant & Food Research	SAMN06049671	GCA_001984525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/525/GCA_001984525.1_ASM198452v1	-	ICMP 19972
Lactobacillus crispatus	47770	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.04108	36.8	-	LYRJ01	67	2081	1893	7/14/17	7/17/17	Scaffold	University of Minnesota	SAMN04498992	GCA_002218975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/975/GCA_002218975.1_ASM221897v1	-	UMNLC20
Gardnerella vaginalis	2702	PRJNA294071	294071	Terrabacteria group	Actinobacteria	1.6611	41.3	-	LIYA01	7	1416	1298	9/2/15	4/4/17	Contig	Medical Diagnostic Laboratories	SAMN04014465	GCA_001278345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/345/GCA_001278345.1_ASM127834v1	-	14019_MetR
Lactobacillus paracasei NRIC 0644	1435038	PRJDB1559	277562	Terrabacteria group	Firmicutes	3.29215	46.3	-	BAYM01	1436	3105	2899	3/12/15	4/3/17	Contig	Tokyo University of Agriculture	SAMD00000556	GCA_000958525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/525/GCA_000958525.1_ASM95852v1	25931593	NRIC0644
Staphylococcus hominis	1290	PRJEB17909	353827	Terrabacteria group	Firmicutes	2.24155	31.3	-	FPJS01	47	2248	2127	11/17/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487789	GCA_900119525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/525/GCA_900119525.1_IMG-taxon_2623620554_annotated_assembly	-	ZBW5
Streptococcus oralis subsp. oralis	1891914	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.99076	41.1	-	NCUJ01	18	1953	1863	4/18/17	4/21/17	Contig	Slagelse Hospital	SAMN06705625	GCA_002096375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/375/GCA_002096375.1_ASM209637v1	27325438	RH_8610_08
Acinetobacter nosocomialis	106654	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.53103	38.7	-	DCNU01	48	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454230	GCA_002322145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/145/GCA_002322145.1_ASM232214v1	28894102	-
Klebsiella variicola	244366	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.61127	57.3	-	JURG01	250	5622	5283	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03198042	GCA_001066535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/535/GCA_001066535.1_ASM106653v1	26230489	835_KPNE
Pseudoalteromonas sp. SK20	1938367	PRJNA362331	362331	Proteobacteria	Gammaproteobacteria	4.14062	40.3	-	MTQC01	188	3831	3516	1/30/17	4/17/17	Contig	BluePharmTrain	SAMN06238075	GCA_001974845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/974/845/GCA_001974845.1_ASM197484v1	-	SK20
Staphylococcus pseudintermedius	283734	PRJNA319397	319397	Terrabacteria group	Firmicutes	2.76657	37.4	chromosome:NZ_CP015626.1/CP015626.1	-	1	2673	2399	7/15/16	4/10/17	Complete Genome	University of Tennessee	SAMN04886711	GCA_001685665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/665/GCA_001685665.2_ASM168566v2	-	63228
Enterobacter asburiae	61645	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.00236	55.5	-	JUKN01	196	4915	4722	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03198217	GCA_001060045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/045/GCA_001060045.1_ASM106004v1	26230489	995_ECLO
Pseudomonas amygdali pv. lachrymans	53707	PRJNA285236	285236	Proteobacteria	Gammaproteobacteria	6.46976	57.7	-	LGLI01	95	6217	5871	9/18/15	4/4/17	Scaffold	University of Toronto	SAMN03837737	GCA_001293845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/845/GCA_001293845.1_PlaYM7902	-	YM7902
Acinetobacter pittii	48296	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.8747	38.8	-	LLCW01	34	3769	3562	11/5/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145627	GCA_001432505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/505/GCA_001432505.1_ASM143250v1	-	ABBL016
Citrobacter freundii	546	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.02731	51.8	-	JVCJ01	146	4977	4762	7/10/15	4/3/17	Contig	University of Washington	SAMN03197753	GCA_001057215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/215/GCA_001057215.1_ASM105721v1	26230489	554_CKOS
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.977	55.2	-	LAAI01	87	4965	4742	3/19/15	3/25/17	Contig	JCVI	SAMN03283617	GCA_000956845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/845/GCA_000956845.1_ASM95684v1	-	34990
Kingella kingae KK3	1305784	PRJEB1636	194423	Proteobacteria	Betaproteobacteria	1.99259	46.5	-	CBSA01	1	1924	1635	9/11/13	4/4/17	Scaffold	URMITE	SAMEA3146309	GCA_001408935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/408/935/GCA_001408935.1_KK3	-	KK3
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.54976	54.8	-	LDBC01	91	5585	5317	5/21/15	4/6/17	Contig	JCVI	SAMN03495938	GCA_001011255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/255/GCA_001011255.1_ASM101125v1	-	GN02278
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98944	64.1	-	FSFK01	40	4953	4803	12/14/16	4/2/17	Contig	SC	SAMEA2069142	GCA_900134845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/845/GCA_900134845.1_10208_3_28	-	453
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.69108	66.5	-	LOUN01	123	8062	7622	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449175	GCA_001525765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/765/GCA_001525765.1_ASM152576v1	-	INT3-BP144
Streptococcus sobrinus TCI-175	1074142	PRJNA72031	72031	Terrabacteria group	Firmicutes	2.16272	43.4	-	AGHR01	669	2337	1863	10/6/11	3/30/17	Contig	JCVI	SAMN02436459	GCA_000228625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/625/GCA_000228625.2_SMUT5-NEX_11-175	-	TCI-175
Mycobacterium chelonae 1518	1299322	PRJNA191786	191786	Terrabacteria group	Actinobacteria	5.39406	64	-	JAOI01	22	5770	5719	1/27/14	2/22/14	Contig	Institute for Genome Sciences	SAMN02641602	GCA_000523895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/895/GCA_000523895.1_ASM52389v1	-	1518
Leclercia adecarboxylata	83655	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.37601	55.8	-	DGIQ01	101	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457691	GCA_002386505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/505/GCA_002386505.1_ASM238650v1	28894102	-
Elizabethkingia anophelis	1117645	PRJEB14302	358788	FCB group	Bacteroidetes/Chlorobi group	3.98893	35.7	-	FTPG01	105	3656	3535	1/19/17	4/6/17	Scaffold	INSTITUT PASTEUR	SAMEA4026800	GCA_900156945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/945/GCA_900156945.1_Elizabethkingia_anophelis_CIP108654	-	LDVH-AR107
Pseudomonas sp. MOIL14HWK12:I1	1033993	PRJNA79067	79067	Proteobacteria	Gammaproteobacteria	5.00552	66.3	-	AZNY01	12	4613	4527	12/17/13	4/17/17	Scaffold	JGI	SAMN02597178	GCA_000510705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/510/705/GCA_000510705.1_ASM51070v1	-	MOIL14HWK12:I1
Streptomyces sp. LaPpAH-165	1156843	PRJNA169742	169742	Terrabacteria group	Actinobacteria	7.56491	71.9	-	AREB01	35	6807	6601	4/19/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02440428	GCA_000373525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/525/GCA_000373525.1_ASM37352v1	-	LaPpAH-165
Paeniclostridium sordellii	1505	PRJEB7741	267479	Terrabacteria group	Firmicutes	3.56286	27.3375	chromosome 1:LN681234.1; plasmid pCS1:LN681235.1	-	2	3469	3469	12/9/14	12/9/14	Chromosome	WTSI	SAMEA1572077	GCA_000953555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/555/GCA_000953555.1_JGS6382	-	JGS6382
Acinetobacter sp. NIPH 542	1217688	PRJNA183224	183224	Proteobacteria	Gammaproteobacteria	4.17639	38.8	-	APSC01	8	3992	3828	4/16/13	5/18/17	Scaffold	Broad Institute	SAMN01828128	GCA_000369825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/825/GCA_000369825.1_Acin_sp_NIPH_542_V1	-	NIPH 542
Flavobacterium sp. JGI 0001001-D01	1235980	PRJNA176083	176083	FCB group	Bacteroidetes/Chlorobi group	1.54493	34.6	-	AUOT02	141	-	-	7/16/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441462	GCA_000464355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/355/GCA_000464355.2_ASM46435v2	-	JGI 0001001-D01
Klebsiella sp. NFIX30	1566164	PRJEB17287	351461	Proteobacteria	Gammaproteobacteria	5.28777	58.1	-	FOOM01	28	5229	4976	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159311	GCA_900113165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/165/GCA_900113165.1_IMG-taxon_2600255300_annotated_assembly	-	NFIX30
Bacillus sp. J33	935836	PRJNA202364	202364	Terrabacteria group	Firmicutes	5.55849	40.6	-	JAEL01	196	5511	5183	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02584958	GCA_000518885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/885/GCA_000518885.1_ASM51888v1	-	J33
Clostridium sp. KNHs209	1469948	PRJNA239495	239495	Terrabacteria group	Firmicutes	4.67609	42.7	-	JPNB01	3	4206	4048	7/22/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02910261	GCA_000732725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/725/GCA_000732725.1_ASM73272v1	-	KNHs209
Sphingomonas sp. 37zxx	1550073	PRJNA260955	260955	Proteobacteria	Alphaproteobacteria	3.69481	64.5	-	JROH01	141	3424	3269	11/23/14	4/9/17	Contig	Applied and enviromental microbiology lab	SAMN03079347	GCA_000786205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/205/GCA_000786205.1_ASM78620v1	-	37zxx
Synechococcus sp. MIT S9509	1801630	PRJNA311929	311929	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.08793	55.4	-	LVHV01	33	3381	3246	4/25/16	4/12/17	Scaffold	MIT	SAMN04490776	GCA_001631935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/935/GCA_001631935.1_ASM163193v1	-	MIT S9509
Rhodococcus sp. AJR001	1852041	PRJNA306614	306614	Terrabacteria group	Actinobacteria	7.25629	62.4	-	LPZM01	167	6833	6556	5/25/16	4/12/17	Contig	Northumbria University	SAMN04357309	GCA_001652355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/355/GCA_001652355.1_rey60	-	AJR001
Enterobacter sp. MGH85	1686389	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.91751	55	-	LETE01	4	4855	4544	6/19/15	4/10/17	Scaffold	Broad Institute	SAMN03280181	GCA_001037655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/655/GCA_001037655.1_Ente_cloa_complex_MGH85_V1	-	MGH85
Staphylococcus sp. HMSC057A02	1739303	PRJNA299953	299953	Terrabacteria group	Firmicutes	2.17636	31.3	-	LTGE01	60	2152	2050	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477612	GCA_001811375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/375/GCA_001811375.1_ASM181137v1	-	HMSC057A02
Corynebacterium sp. HMSC074E01	1715017	PRJNA296144	296144	Terrabacteria group	Actinobacteria	2.6545	60.8	-	LTKT01	54	2476	2353	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04455695	GCA_001808885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/885/GCA_001808885.1_ASM180888v1	-	HMSC074E01
Arthrobacter sp. HMSC08H08	1581143	PRJNA269912	269912	Terrabacteria group	Actinobacteria	2.20635	60.1	-	LWNR01	41	1973	1850	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03434394	GCA_001807575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/575/GCA_001807575.1_ASM180757v1	-	HMSC08H08
Bradyrhizobium sp. AS23.2	1680155	PRJNA289134	289134	Proteobacteria	Alphaproteobacteria	8.70545	63.1	-	LGHM01	430	8443	7610	12/19/16	4/16/17	Contig	UFRGS	SAMN03842497	GCA_001908185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/185/GCA_001908185.1_ASM190818v1	-	AS23.2
Streptococcus sp. HMSC076C08	1739270	PRJNA299920	299920	Terrabacteria group	Firmicutes	1.99815	41.2	-	LTHE01	38	1956	1856	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477605	GCA_001810825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/825/GCA_001810825.1_ASM181082v1	-	HMSC076C08
Mycobacterium sp. H001	1720565	PRJNA294421	294421	Terrabacteria group	Actinobacteria	5.45035	64	-	LJYH01	52	5373	5211	11/6/15	4/11/17	Contig	US EPA	SAMN04091131	GCA_001440005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/005/GCA_001440005.1_ASM144000v1	-	H001
Prevotella sp. P4-51	2024228	PRJNA396820	396820	FCB group	Bacteroidetes/Chlorobi group	3.15243	51.6	-	NPJM01	76	2760	2635	8/14/17	8/16/17	Contig	University of Ljubljana	SAMN07431215	GCA_002251455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/455/GCA_002251455.1_ASM225145v1	-	P4-51
Enterococcus sp. GMD4E	1169668	PRJNA157407	157407	Terrabacteria group	Firmicutes	2.29388	38	-	AJRD01	99	2372	2220	9/14/12	4/7/17	Contig	Los Alamos National Laboratory	SAMN02470274	GCA_000296935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/935/GCA_000296935.1_ASM29693v1	23493677	GMD4E
Methylobacterium sp. Leaf456	1736382	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	5.57704	69.4	-	LMQV01	44	5273	5024	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151772	GCA_001425465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/465/GCA_001425465.1_Leaf456	26633631	Leaf456
Nocardioides sp. REDSEA-S43_B3	1811560	PRJNA289734	289734	Terrabacteria group	Actinobacteria	3.68377	71.9	-	LUPQ01	164	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534618	GCA_001627395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/395/GCA_001627395.1_ASM162739v1	27377622	-
Marinobacter sp. UBA4489	1946822	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.31933	57.3	-	DGNP01	46	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455146	GCA_002388985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/985/GCA_002388985.1_ASM238898v1	28894102	-
Acidovorax sp. 16-64-162	1970307	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	3.94291	63.7	-	NCHE01	212	3797	3476	8/16/17	8/16/17	Scaffold	None	SAMN06622276	GCA_002281795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/795/GCA_002281795.1_ASM228179v1	-	-
Paenibacillus sp. FSL H7-689	1227349	PRJNA173825	173825	Terrabacteria group	Firmicutes	6.84058	45.9	-	ASPU01	66	5954	5805	1/13/14	4/9/17	Contig	Cornell University	SAMN02597349	GCA_000517905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/905/GCA_000517905.1_ASM51790v1	24422886	FSL H7-689
Alcanivorax sp. UBA4150	1945986	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.94097	65.2	-	DFVW01	188	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452028	GCA_002380185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/185/GCA_002380185.1_ASM238018v1	28894102	-
Ruminococcus sp. UBA946	1947442	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.67501	41.7	-	DBCY01	214	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06454462	GCA_002293295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/295/GCA_002293295.1_ASM229329v1	28894102	-
Thioalkalivibrio sp. ALRh	1266911	PRJNA183025	183025	Proteobacteria	Gammaproteobacteria	2.74768	66	-	ARLV01	14	2641	2531	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440484	GCA_000381425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/425/GCA_000381425.1_ASM38142v1	-	ALRh
Bacteroides sp. CAG:189	1262737	PRJEB747	206602	FCB group	Bacteroidetes/Chlorobi group	5.0247	41.9	-	CAYI01	168	3901	3866	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138502	GCA_000432295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/295/GCA_000432295.1_MGS189	-	-
Prochlorococcus sp. scB241_527N11	1471451	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.47694	31.3	-	JFLB01	321	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671322	GCA_000634055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/055/GCA_000634055.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. BCW_6463	1903580	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.8105	30	-	MJXL01	80	1897	1730	10/4/16	4/13/17	Scaffold	University of California at Davis	SAMN03360172	GCA_001762785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/785/GCA_001762785.1_ASM176278v1	-	BCW_6463
Neisseria sp. HMSC061B04	1715140	PRJNA296268	296268	Proteobacteria	Betaproteobacteria	2.26712	49.3	-	LTQL01	77	2243	2109	10/25/16	4/18/17	Scaffold	The Genome Institute at Washington University	SAMN04498636	GCA_001836705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/705/GCA_001836705.1_ASM183670v1	-	HMSC061B04
Rhizobium sp. YR295	1500257	PRJNA247572	247572	Proteobacteria	Alphaproteobacteria	6.45054	60.1	-	JQNM01	29	6127	5972	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02787140	GCA_000745255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/255/GCA_000745255.1_ASM74525v1	-	YR295
Halomonas sp. 54_146	1635257	PRJNA278302	278302	Proteobacteria	Gammaproteobacteria	3.56467	54.8	-	LGEN01	90	3302	3302	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445111	GCA_001507855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/855/GCA_001507855.1_ASM150785v1	26787827	-
Chryseobacterium sp. OV715	1500287	PRJNA247529	247529	FCB group	Bacteroidetes/Chlorobi group	5.30471	38.1	-	JUGX01	26	4757	4654	12/9/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02787107	GCA_000800075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/075/GCA_000800075.1_ASM80007v1	-	OV715
Mesorhizobium sp. LSHC440A00	1287307	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.47031	62.5	-	AYVT01	71	6387	5859	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359687	GCA_000502735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/735/GCA_000502735.1_Mloti_LSHC440A00	-	LSHC440A00
Variovorax sp. 67-131	1895865	PRJNA279279	279279	Proteobacteria	Betaproteobacteria	7.94721	67.3	-	MKWO01	55	7243	7110	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660635	GCA_001899795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/795/GCA_001899795.1_ASM189979v1	-	-
Xanthomonas translucens pv. translucens	134875	PRJNA326107	326107	Proteobacteria	Gammaproteobacteria	4.56017	67.6	-	MADS01	366	4160	3384	8/18/16	4/5/17	Scaffold	The Connecticut Agricultural Experiment Station	SAMN05258682	GCA_001707275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/275/GCA_001707275.1_MC_6	-	BLSB3
Microbacterium sp. Leaf320	1736334	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.86608	67.9	-	LMOD01	9	3764	3667	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151724	GCA_001423485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/485/GCA_001423485.1_Leaf320	26633631	Leaf320
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.85601	58.9	-	LNXP01	56	4630	4502	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339880	GCA_001682055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/055/GCA_001682055.1_ASM168205v1	-	S4732
Sphingopyxis sp. REDSEA-S42_B3	1811574	PRJNA289734	289734	Proteobacteria	Alphaproteobacteria	2.90641	65.3	-	LURI01	11	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534663	GCA_001628265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/265/GCA_001628265.1_ASM162826v1	27377622	-
Bacillus velezensis SK19.001	1281778	PRJNA186403	186403	Terrabacteria group	Firmicutes	3.92572	46.2	-	AOFO01	74	3895	3748	1/7/14	3/22/17	Contig	Bacillus methylotrophicus	SAMN02597424	GCA_000513755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/755/GCA_000513755.1_SOAPdenovo	-	SK19.001
Gilliamella apicola	1196095	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	3.0515	33.7	-	NAHU01	398	2760	2590	4/13/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603506	GCA_002088845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/845/GCA_002088845.1_ASM208884v1	-	NO10
Klebsiella michiganensis	1134687	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.1731	55.8	-	JVLB01	445	6028	5670	7/10/15	2/25/17	Scaffold	University of Washington	SAMN03197527	GCA_001056405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/405/GCA_001056405.1_ASM105640v1	26230489	337_KOXY
Achromobacter sp. ATCC35328	1806490	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	5.2107	50.8	-	CYUC01	170	5648	5171	9/19/15	4/11/17	Scaffold	SC	SAMEA2258939	GCA_001299315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/315/GCA_001299315.1_11861_6_73	-	ATCC 35328
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.60757	51	-	MPRE01	62	2583	2472	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016278	GCA_002021005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/005/GCA_002021005.1_ASM202100v1	-	-
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79237	32.3	-	FQMF01	19	2794	2617	11/24/16	4/6/17	Contig	SC	SAMEA3449133	GCA_900126985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/985/GCA_900126985.1_17175_3_77	-	3688STDY6125131
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.40341	67.8	-	LPLL01	88	6702	6357	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449645	GCA_001533575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/575/GCA_001533575.1_ASM153357v1	-	MSMB754WGS
Xanthomonas axonopodis pv. manihotis str. UA556	1185667	PRJNA163729	163729	Proteobacteria	Gammaproteobacteria	4.84265	65.1	-	AKER01	139	4306	3993	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090348	GCA_000266385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/385/GCA_000266385.1_UA556	22699502	UA556
Candidatus Microthrix sp. UBA4147	1946187	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.48649	41.9	-	DFVZ01	168	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451476	GCA_002380145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/145/GCA_002380145.1_ASM238014v1	28894102	-
Catabacter sp. UBA4247	1946266	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.40354	49.1	-	DGWX01	75	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455948	GCA_002395405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/405/GCA_002395405.1_ASM239540v1	28894102	-
Catabacter sp. UBA4246	1946265	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.74996	58.9	-	DGWY01	314	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455949	GCA_002395425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/425/GCA_002395425.1_ASM239542v1	28894102	-
Candidatus Microthrix sp. UBA4144	1946186	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.4959	40.7	-	DFWC01	158	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451473	GCA_002380665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/665/GCA_002380665.1_ASM238066v1	28894102	-
Xanthomonas axonopodis pv. manihotis str. UA560	1185668	PRJNA163731	163731	Proteobacteria	Gammaproteobacteria	4.89792	65.1	-	AKES01	154	4336	4015	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090349	GCA_000266405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/405/GCA_000266405.1_UA560	22699502	UA560
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.52227	67.7	-	LPLM01	103	6855	6510	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449646	GCA_001533605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/605/GCA_001533605.1_ASM153360v1	-	MSMB756WGS
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.78919	32.3	-	FQMJ01	14	2787	2621	11/24/16	4/6/17	Contig	SC	SAMEA3449134	GCA_900126995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/995/GCA_900126995.1_17175_3_78	-	3688STDY6125132
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB13450	319501	Proteobacteria	Gammaproteobacteria	5.64027	57.4	-	FKLR01	57	5643	5365	5/18/16	2/21/17	Contig	INSTITUTO NACIONAL DE SALUD	SAMEA3940169	GCA_900080215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/215/GCA_900080215.1_KQS06HV_PRJEB13450_wgs.embl	-	-
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.59894	51	-	MPRG01	68	2572	2461	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016280	GCA_002021025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/025/GCA_002021025.1_ASM202102v1	-	-
Achromobacter sp. 2789STDY5663443	1806500	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	6.86575	67.3	-	CYTX01	36	6376	6192	9/19/15	4/11/17	Scaffold	SC	SAMEA2258937	GCA_001299335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/335/GCA_001299335.1_11861_6_71	-	2789STDY5663443
Klebsiella michiganensis	1134687	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.29286	55.8	-	JVKS01	392	6219	5838	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197536	GCA_001056445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/445/GCA_001056445.1_ASM105644v1	26230489	345_KOXY
Gilliamella apicola	1196095	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	3.06325	33.6	-	NAHV01	143	2758	2634	4/13/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603507	GCA_002088855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/855/GCA_002088855.1_ASM208885v1	-	NO5
Bacillus velezensis	492670	PRJNA238839	238839	Terrabacteria group	Firmicutes	3.99223	46.5	-	JFBZ01	218	4054	3696	4/7/14	8/8/17	Contig	Korea Research Institute of Bioscience and Biotechnology	SAMN02649967	GCA_000612565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/565/GCA_000612565.1_KWG_Bacillus	-	AH159-1
Sphingopyxis sp. REDSEA-S34_B10	1811571	PRJNA289734	289734	Proteobacteria	Alphaproteobacteria	1.75185	64.9	-	LURF01	399	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534660	GCA_001628315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/315/GCA_001628315.1_ASM162831v1	27377622	-
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.875	58.9	-	LNXR01	93	4642	4513	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339866	GCA_001682075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/075/GCA_001682075.1_ASM168207v1	-	S1425
Microbacterium sp. Leaf161	1736281	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.63089	67.9	-	LMOW01	6	3499	3400	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151661	GCA_001423645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/645/GCA_001423645.1_Leaf161	26633631	Leaf161
Xanthomonas translucens pv. poae	227946	PRJNA326107	326107	Proteobacteria	Gammaproteobacteria	4.5893	67.9	-	MADO01	514	3962	3606	8/18/16	4/5/17	Scaffold	The Connecticut Agricultural Experiment Station	SAMN05258213	GCA_001707285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/285/GCA_001707285.1_XTG_AA	-	CNC2-P4
Mesorhizobium sp. LSJC264A00	1287321	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.5991	62.5	-	AYVQ01	171	6528	5936	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359690	GCA_000502755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/755/GCA_000502755.1_Mloti_LSJC264A00	-	LSJC264A00
Chryseobacterium sp. Hurlbut01	1681828	PRJNA289499	289499	FCB group	Bacteroidetes/Chlorobi group	3.89405	34.1	-	LGIP01	23	3590	3383	7/27/15	4/10/17	Scaffold	Oklahoma State Universtiy	SAMN03854360	GCA_001187685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/685/GCA_001187685.1_ASM118768v1	26383650	Hurlbut01
Halomonas sp. UBA1491	1946583	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.25976	55.4	-	DCRN01	159	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455383	GCA_002325135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/135/GCA_002325135.1_ASM232513v1	28894102	-
Rhizobium sp. H41	1510041	PRJNA252806	252806	Proteobacteria	Alphaproteobacteria	5.57016	59.3	-	JPFJ01	162	5545	5259	9/26/14	4/9/17	Contig	Nanjing Agticultrual University	SAMN02863109	GCA_000758445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/445/GCA_000758445.1_ASM75844v1	25377707	H41
Neisseria sp. HMSC061H08	1715154	PRJNA296282	296282	Proteobacteria	Betaproteobacteria	2.24085	49.1	-	LTQH01	54	2204	2052	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498643	GCA_001836795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/795/GCA_001836795.1_ASM183679v1	-	HMSC061H08
Campylobacter sp. BCW_6465	1903582	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.89818	30.2	-	MJXN01	113	2010	1801	10/4/16	4/13/17	Scaffold	University of California at Davis	SAMN03360174	GCA_001762815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/815/GCA_001762815.1_ASM176281v1	-	BCW_6465
Prochlorococcus sp. scB241_528J14	1471453	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.18309	31.1	-	JFLD01	326	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671324	GCA_000634075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/075/GCA_000634075.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Bacteroides sp. CAG:545	1262742	PRJEB926	206752	FCB group	Bacteroidetes/Chlorobi group	2.70275	49.1	-	CBAA01	82	2225	2183	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138513	GCA_000432515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/515/GCA_000432515.1_MGS545	-	-
Thioalkalivibrio sp. ALE22	1158176	PRJNA183027	183027	Proteobacteria	Gammaproteobacteria	2.74824	67.4	-	ARLW01	20	2705	2587	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441656	GCA_000381445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/445/GCA_000381445.1_ASM38144v1	-	ALE22
Ruminococcus sp. UBA1409	1947405	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.73779	51.1	-	DBPX01	22	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06450972	GCA_002305045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/045/GCA_002305045.1_ASM230504v1	28894102	-
Alcanivorax sp. UBA3989	1945985	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.92251	65.5	-	DGCB01	59	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454241	GCA_002384445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/445/GCA_002384445.1_ASM238444v1	28894102	-
Paenibacillus sp. FSL H8-237	1227350	PRJNA173826	173826	Terrabacteria group	Firmicutes	7.32442	44	-	ASPV01	128	6559	6376	1/13/14	4/9/17	Contig	Cornell University	SAMN02597350	GCA_000517925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/925/GCA_000517925.1_ASM51792v1	24422886	FSL H8-237
Acidovorax sp. 17-64-282	1970308	PRJNA379596	379596	Proteobacteria	Betaproteobacteria	3.84938	63.5	-	NCIT01	405	3910	3455	8/16/17	8/16/17	Scaffold	None	SAMN06622235	GCA_002282295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/295/GCA_002282295.1_ASM228229v1	-	-
Eubacterium sp. UBA4343	1946482	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.54796	50.2	-	DGTF01	80	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454390	GCA_002394235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/235/GCA_002394235.1_ASM239423v1	28894102	-
Nocardioides sp. REDSEA-S36_B10	1811556	PRJNA289734	289734	Terrabacteria group	Actinobacteria	2.33778	71	-	LUPM01	439	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534614	GCA_001627415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/415/GCA_001627415.1_ASM162741v1	27377622	-
Methylobacterium sp. Leaf466	1736386	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.30054	69.7	-	LMRC01	36	3977	3829	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151776	GCA_001425565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/565/GCA_001425565.1_Leaf466	26633631	Leaf466
Treponema sp. UBA4377	1947728	PRJNA348753	348753	Spirochaetes	Spirochaetia	2.66927	49	-	DGRX01	31	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451341	GCA_002391235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/235/GCA_002391235.1_ASM239123v1	28894102	-
Enterococcus sp. GMD1E	1169665	PRJNA157401	157401	Terrabacteria group	Firmicutes	2.57129	38	-	AJQX01	216	2625	2439	9/14/12	4/7/17	Contig	Los Alamos National Laboratory	SAMN02470261	GCA_000296975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/975/GCA_000296975.1_ASM29697v1	23493677	GMD1E
Prevotella sp. P3-120	2024220	PRJNA396820	396820	FCB group	Bacteroidetes/Chlorobi group	3.20995	45.7	-	NPJD01	94	2637	2520	8/14/17	8/16/17	Contig	University of Ljubljana	SAMN07431224	GCA_002251535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/535/GCA_002251535.1_ASM225153v1	-	P3-120
Mycobacterium sp. H002	1720566	PRJNA294421	294421	Terrabacteria group	Actinobacteria	5.42159	64	-	LJYI01	60	5353	5191	11/6/15	4/11/17	Contig	US EPA	SAMN04091132	GCA_001440085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/085/GCA_001440085.1_ASM144008v1	26798093	H002
Streptococcus sp. HMSC072E12	1739275	PRJNA299925	299925	Terrabacteria group	Firmicutes	2.11841	35.2	-	LTGZ01	49	2175	2087	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477588	GCA_001810915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/915/GCA_001810915.1_ASM181091v1	-	HMSC072E12
Bradyrhizobium sp. NAS80.1	1680159	PRJNA289210	289210	Proteobacteria	Alphaproteobacteria	9.23547	63.1	-	LGHL01	533	8856	7914	12/19/16	4/17/17	Contig	UFRGS	SAMN03846989	GCA_001908205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/205/GCA_001908205.1_ASM190820v1	-	NAS80.1
Arthrobacter sp. M2012083	1197706	PRJNA168078	168078	Terrabacteria group	Actinobacteria	4.62917	62	-	AKKK01	67	4277	4144	7/23/12	5/18/17	Contig	"State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University"	SAMN02470964	GCA_000281065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/065/GCA_000281065.1_ASM28106v1	23012289	M2012083
Corynebacterium sp. HMSC070E08	1715006	PRJNA296133	296133	Terrabacteria group	Actinobacteria	2.72586	61	-	LTKS01	79	2585	2427	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04387652	GCA_001808895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/895/GCA_001808895.1_ASM180889v1	-	HMSC070E08
Staphylococcus sp. HMSC071G07	1739306	PRJNA299956	299956	Terrabacteria group	Firmicutes	2.4822	38.8	-	LTGB01	45	2352	2265	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477616	GCA_001811435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/435/GCA_001811435.1_ASM181143v1	-	HMSC071G07
Enterobacter sp. MGH86	1686390	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.15194	55.2	-	LETF01	31	4878	4646	6/19/15	4/17/17	Scaffold	Broad Institute	SAMN03280182	GCA_001037665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/665/GCA_001037665.1_Ente_cloa_complex_MGH86_V1	-	MGH86
Rhodococcus sp. 852002-51564_SCH6189132-a	1834103	PRJNA305922	305922	Terrabacteria group	Actinobacteria	4.86201	68.2	-	LZMJ01	87	4504	4250	6/17/16	4/12/17	Contig	JCVI	SAMN04692018	GCA_001665495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/495/GCA_001665495.1_ASM166549v1	-	852002-51564_SCH6189132-a
Synechococcus sp. MIT S9504	1801628	PRJNA311927	311927	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.08729	55.4	-	LVHT01	34	3354	3215	4/25/16	4/12/17	Scaffold	MIT	SAMN04490774	GCA_001632105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/105/GCA_001632105.1_ASM163210v1	-	MIT S9504
Sphingomonas sp. 35-24ZXX	1545915	PRJNA260955	260955	Proteobacteria	Alphaproteobacteria	4.09098	64	-	JROG01	35	3788	3653	11/23/14	4/9/17	Contig	Applied and enviromental microbiology lab	SAMN03078812	GCA_000786215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/215/GCA_000786215.1_ASM78621v1	-	35-24zxx
Clostridium sp. KNHs214	1540257	PRJNA239494	239494	Terrabacteria group	Firmicutes	4.2662	30.5	-	JQMW01	14	3901	3629	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02744597	GCA_000744935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/935/GCA_000744935.1_ASM74493v1	-	KNHs214
Bacillus sp. J13	935835	PRJNA202359	202359	Terrabacteria group	Firmicutes	6.58303	51.9	-	JAEO01	125	5988	5662	1/10/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02584953	GCA_000518945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/518/945/GCA_000518945.1_ASM51894v1	-	J13
Klebsiella sp. NFIX54	1566152	PRJEB17315	351515	Proteobacteria	Gammaproteobacteria	5.43739	57.9	-	FOPB01	28	5349	5116	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159418	GCA_900113365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/365/GCA_900113365.1_IMG-taxon_2600255392_annotated_assembly	-	NFIX54
Flavobacterium sp. MedPE-SWcel	1860086	PRJNA318731	318731	FCB group	Bacteroidetes/Chlorobi group	2.51683	33.2	-	MPCW01	22	2370	2322	11/10/16	11/10/16	Contig	University Miguel Hernandez	SAMN05219212	GCA_001874325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/325/GCA_001874325.1_ASM187432v1	27446036	-
Acinetobacter sp. ANC 3880	1217701	PRJNA183223	183223	Proteobacteria	Gammaproteobacteria	4.37423	41	-	APSD01	14	4096	3931	4/17/13	5/18/17	Scaffold	Broad Institute	SAMN01087865	GCA_000369845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/845/GCA_000369845.1_Acin_sp_ANC_3880_V1	-	ANC 3880
Paeniclostridium sordellii	1505	PRJEB7738	267476	Terrabacteria group	Firmicutes	3.53495	27.3148	chromosome 1:LN679998.1; plasmid pCS1:LN679999.1; plasmid pCS2:LN680000.1	-	3	3436	3435	11/20/14	11/20/14	Chromosome	WTSI	SAMEA1572090	GCA_000953675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/675/GCA_000953675.1_ATCC9714_	-	ATCC9714
Streptomyces sp. HmicA12	1156844	PRJNA169744	169744	Terrabacteria group	Actinobacteria	9.16195	71.1	-	ARED01	56	8352	8014	4/19/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02440430	GCA_000373565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/565/GCA_000373565.1_ASM37356v1	-	HmicA12
Pseudomonas sp. MOIL14HWK12:I2	1033994	PRJNA79069	79069	Proteobacteria	Gammaproteobacteria	5.03794	66.2	-	AZOA01	19	4638	4543	12/17/13	4/17/17	Scaffold	JGI	SAMN02597180	GCA_000510745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/510/745/GCA_000510745.1_ASM51074v1	-	MOIL14HWK12:I2
Elizabethkingia anophelis	1117645	PRJEB14302	358788	FCB group	Bacteroidetes/Chlorobi group	3.95901	35.6	-	FTQY01	24	3649	3550	1/20/17	5/31/17	Scaffold	INSTITUT PASTEUR	SAMEA50775418	GCA_900156985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/985/GCA_900156985.1_ASM90015698v1	-	-
Leclercia adecarboxylata	83655	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.53393	55.9	-	DGJG01	25	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454881	GCA_002387365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/365/GCA_002387365.1_ASM238736v1	28894102	-
Mycobacterium chelonae	1774	PRJNA323571	323571	Terrabacteria group	Actinobacteria	2.77502	64	-	MAFG01	15	-	-	3/3/17	3/3/17	Contig	LNCC	SAMN05186787	GCA_002013615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/615/GCA_002013615.1_ASM201361v1	-	D16R3
Streptococcus sobrinus TCI-200	1074152	PRJNA72047	72047	Terrabacteria group	Firmicutes	2.08568	43.5	-	AGHT01	216	2059	1884	10/6/11	3/30/17	Contig	JCVI	SAMN02436529	GCA_000228665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/665/GCA_000228665.2_SMUT6-NEX_1-200	-	TCI-200
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.74215	66.5	-	LOUR01	121	8134	7684	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449180	GCA_001525775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/775/GCA_001525775.1_ASM152577v1	-	INT3-BP185
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.06554	64.1	-	FVKL01	24	5095	4897	3/10/17	3/18/17	Contig	SC	SAMEA2069144	GCA_900134905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/905/GCA_900134905.1_10208_3_34	-	459
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.18907	55.1	-	LDBG01	49	5092	4866	5/21/15	4/6/17	Contig	JCVI	SAMN03495942	GCA_001011265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/265/GCA_001011265.1_ASM101126v1	-	GN02355
Kingella kingae	504	PRJEB6199	249053	Proteobacteria	Betaproteobacteria	2.12853	46.6	-	CCJT01	33	2332	2064	9/3/14	4/2/17	Contig	URMITE	SAMEA2618372	GCA_000751135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/135/GCA_000751135.1_Kingella_kingae_KK247_	-	-
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.01076	54.8	-	LAAH01	92	4984	4755	3/19/15	3/25/17	Contig	JCVI	SAMN03283629	GCA_000956855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/855/GCA_000956855.1_ASM95685v1	-	34992
Citrobacter freundii	546	PRJNA275513	275513	Proteobacteria	Gammaproteobacteria	5.66353	51.9	-	LIDR01	356	5711	5379	8/25/15	4/4/17	Contig	"West China Hospital, Sichuan University"	SAMN03975633	GCA_001273815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/815/GCA_001273815.1_ASM127381v1	-	WCHCF65
Acinetobacter pittii	48296	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.89192	38.7	-	LLDE01	99	3863	3598	11/5/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145635	GCA_001432635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/635/GCA_001432635.1_ASM143263v1	-	ABBL024
Pseudomonas amygdali pv. mellea	251721	PRJNA287065	287065	Proteobacteria	Gammaproteobacteria	6.10766	57.7	-	LGLB01	124	5709	5212	9/18/15	4/4/17	Scaffold	University of Toronto	SAMN03837767	GCA_001293975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/975/GCA_001293975.1_PmeN6801	-	N6801
Enterobacter asburiae	61645	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.95298	55.5	-	JWBX01	134	4853	4661	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197089	GCA_001076295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/295/GCA_001076295.1_ASM107629v1	26230489	1135_ECLO
Candidatus Thioglobus singularis PS1	1125411	PRJNA229178	229178	Proteobacteria	Gammaproteobacteria	1.71415	37.4	chromosome:NZ_CP006911.1/CP006911.1	-	1	1746	1686	9/14/15	4/11/17	Complete Genome	University of Washington	SAMN04054243	GCA_001281385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/385/GCA_001281385.1_ASM128138v1	26494659	PS1
Pseudoalteromonas sp. SK18	1938366	PRJNA362325	362325	Proteobacteria	Gammaproteobacteria	3.96447	40.2	-	MTQB01	87	3622	3458	1/30/17	4/17/17	Contig	BluePharmTrain	SAMN06237885	GCA_001974855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/974/855/GCA_001974855.1_ASM197485v1	-	SK18
Klebsiella variicola	244366	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.60829	57.3	-	JURF01	140	5554	5296	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03198043	GCA_001066555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/555/GCA_001066555.1_ASM106655v1	26230489	836_KPNE
Acinetobacter nosocomialis	106654	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.68407	38.6	-	DCYY01	50	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454932	GCA_002331545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/545/GCA_002331545.1_ASM233154v1	28894102	-
Streptococcus oralis subsp. oralis	1891914	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.9884	41	-	NCUK01	13	1987	1864	4/18/17	4/21/17	Contig	Slagelse Hospital	SAMN06705624	GCA_002096445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/445/GCA_002096445.1_ASM209644v1	27325438	RH_57980_07
Lactobacillus paracasei subsp. paracasei DSM 5622	1423829	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.88196	46.5	-	AZGH01	170	3004	2781	11/6/15	4/4/17	Contig	Shanghai Majorbio	SAMN02369433	GCA_001436385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/385/GCA_001436385.1_ASM143638v1	26415554	DSM 5622
Gardnerella vaginalis	2702	PRJNA342481	342481	Terrabacteria group	Actinobacteria	1.70685	41.2	-	MJBN01	21	1469	1349	12/22/16	4/6/17	Contig	Middle Tennessee State University	SAMN05757759	GCA_001913835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/835/GCA_001913835.1_ASM191383v1	-	ATCC 49145
Lactobacillus crispatus	47770	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.03733	36.8	-	LYRK01	68	2084	1889	7/14/17	7/17/17	Scaffold	University of Minnesota	SAMN04498993	GCA_002219005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/219/005/GCA_002219005.1_ASM221900v1	-	UMNLC21
Pectobacterium carotovorum subsp. actinidiae	1507808	PRJNA354644	354644	Proteobacteria	Gammaproteobacteria	4.89191	51.5	-	MPUI01	50	4348	4115	2/3/17	4/6/17	Scaffold	Scion	SAMN06049670	GCA_001984535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/535/GCA_001984535.1_ASM198453v1	-	ICMP 19971
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.7416	47.6	-	MEAF01	77	3451	3278	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320407	GCA_001883415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/415/GCA_001883415.1_ASM188341v1	-	01/0230-7
Flavobacterium psychrophilum	96345	PRJEB21067	396411	FCB group	Bacteroidetes/Chlorobi group	2.57209	32.5	-	FYCP01	179	2325	2258	7/29/17	8/7/17	Contig	INRA	SAMEA104125755	GCA_900186555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/555/GCA_900186555.1_KU051128-10_V1	-	KU 051128-10
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.45553	67.4	-	LOXP01	91	6795	6441	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449271	GCA_001524805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/805/GCA_001524805.1_ASM152480v1	-	MSMB2037
Aeromonas hydrophila	644	PRJNA326907	326907	Proteobacteria	Gammaproteobacteria	4.97305	61.1	-	MAKI01	99	4668	4457	10/11/16	4/5/17	Contig	University of Malaya	SAMN05294042	GCA_001756325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/325/GCA_001756325.1_ASM175632v1	-	M052
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.31608	62.8	-	DBBG01	20	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452152	GCA_002292125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/125/GCA_002292125.1_ASM229212v1	28894102	-
Staphylococcus saprophyticus	29385	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.42318	32.9	-	DCDK01	15	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06454656	GCA_002316395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/395/GCA_002316395.1_ASM231639v1	28894102	-
Vibrio sp. V09_P4A23P171	1938664	PRJNA361511	361511	Proteobacteria	Gammaproteobacteria	3.93643	44.6	-	NDIE01	72	3699	3504	8/4/17	8/6/17	Contig	Instituto de ecologia	SAMN06251405	GCA_002241235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/235/GCA_002241235.1_ASM224123v1	-	V09_P4A23P171
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.24182	36.7	-	LPSM01	7	2376	2240	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305173	GCA_001560675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/675/GCA_001560675.1_NG05B_CO5_06	-	NG05B_CO5_06
Bifidobacterium breve	1685	PRJEB16050	348515	Terrabacteria group	Actinobacteria	2.26049	58.7	-	FNFW01	25	2012	1816	10/20/16	4/5/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216468	GCA_900102865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/865/GCA_900102865.1_IMG-taxon_2651870312_annotated_assembly	-	RP2
Mycobacterium abscessus 4S-0116-S	1001724	PRJNA65177	65177	Terrabacteria group	Actinobacteria	4.84192	64.2	-	AKVE01	7	4843	4735	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00728579	GCA_000270625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/625/GCA_000270625.1_ASM27062v1	-	4S-0116-S
Moraxella catarrhalis	480	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.89915	41.6	-	JVKW01	56	1771	1663	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197532	GCA_001064665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/665/GCA_001064665.1_ASM106466v1	26230489	340_MCAT
Lactobacillus salivarius	1624	PRJNA357984	357984	Terrabacteria group	Firmicutes	2.01127	32.9	-	NBDX01	58	2018	1881	4/5/17	4/8/17	Scaffold	University College Cork	SAMN06163276	GCA_002079335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/335/GCA_002079335.1_ASM207933v1	-	NCIMB8818
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.68877	56.5	-	MSAH01	78	4596	4372	12/28/16	4/6/17	Contig	FDA/CFSAN	SAMN06100260	GCA_001922925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/925/GCA_001922925.1_ASM192292v1	-	MOD1-Md1g
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.30056	54.8	-	FKZQ01	48	6164	5899	5/19/16	2/21/17	Scaffold	SC	SAMEA2273556	GCA_900083585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/585/GCA_900083585.1_12045_6_24	-	2880STDY5682471
Enterobacter cloacae JD8715	1399775	PRJNA218810	218810	Proteobacteria	Gammaproteobacteria	4.76923	53.3	-	JDWG01	52	4683	4420	5/8/14	3/24/17	Scaffold	DOE Joint Genome Institute	SAMN02952977	GCA_000686165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/165/GCA_000686165.1_ASM68616v1	-	JD8715
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.41435	32.7	-	CUEV01	61	2367	2250	3/31/15	3/26/17	Contig	SC	SAMEA1035155	GCA_001230845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/845/GCA_001230845.1_7067_4_86	-	CN1138
Propionibacterium acnes HL013PA2	765070	PRJNA49171	49171	Terrabacteria group	Actinobacteria	2.47576	60.1	-	ADYN01	18	2494	2361	7/30/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189200	GCA_000144525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/525/GCA_000144525.1_ASM14452v1	-	HL013PA2
Burkholderia sp. LK4	1628208	PRJNA277397	277397	Proteobacteria	Betaproteobacteria	8.67926	66.5	-	LDUL01	196	8035	7602	6/30/15	4/10/17	Contig	University of Malaya	SAMN03390110	GCA_001043615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/615/GCA_001043615.1_ASM104361v1	-	LK4
Campylobacter coli 1148	887292	PRJNA52721	52721	Proteobacteria	delta/epsilon subdivisions	1.70349	31.2	-	AIMX01	113	1757	1671	3/16/12	3/15/17	Contig	Campylobacter coli 1148	SAMN02428971	GCA_000253715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/715/GCA_000253715.2_ASM25371v2	-	1148
Mannheimia haemolytica	75985	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.66032	41	-	LQEU01	106	2749	2591	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366542	GCA_001929775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/775/GCA_001929775.1_ASM192977v1	-	2683MH
Lactobacillus plantarum subsp. plantarum ATCC 14917 = JCM 1149 = CGMCC 1.2437	525338	PRJNA31515	31515	Terrabacteria group	Firmicutes	3.21226	44.5	-	ACGZ02	9	3115	2960	2/20/09	3/22/17	Scaffold	Baylor College of Medicine	SAMN00001478	GCA_000143745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/143/745/GCA_000143745.1_ASM14374v1	-	ATCC 14917
Serratia marcescens	615	PRJNA303138	303138	Proteobacteria	Gammaproteobacteria	5.60412	57.2	-	LNRP01	11	5611	5330	2/10/16	3/28/17	Scaffold	chong qing medical university	SAMN04286789	GCA_001557575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/575/GCA_001557575.1_ASM155757v1	-	CQMUS2
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.16845	39.9	-	FQLM01	20	1049	948	5/10/17	5/24/17	Scaffold	WTSI	SAMEA1094340	GCA_900118935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/935/GCA_900118935.1_7067_6_82	-	15a
Leuconostoc mesenteroides	1245	PRJNA375758	375758	Terrabacteria group	Firmicutes	1.71628	37.9	-	NCWT01	146	1750	1506	8/29/17	8/30/17	Contig	SysMilk	SAMN06718482	GCA_002276945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/945/GCA_002276945.1_ASM227694v1	-	OG2
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.12604	41.5	-	JJPV01	136	3532	3319	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708953	GCA_000979765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/765/GCA_000979765.1_gtlEnvA5udCFS	25756680	3.H.M.1B.2
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.56687	47.1	-	CWGL01	28	4283	4107	6/26/15	3/26/17	Contig	SC	SAMEA980216	GCA_001182085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/085/GCA_001182085.1_5749_7_4	-	ERL053484
Streptococcus pasteurianus ATCC 43144	981540	PRJDA62519	62519	Terrabacteria group	Firmicutes	2.10008	37.4	chromosome:NC_015600.1/AP012054.1	-	1	2115	1874	5/28/11	4/7/17	Complete Genome	"Yang-Ming Genome Sequencing Center, National Yang-Ming University"	SAMD00060984	GCA_000270165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/165/GCA_000270165.1_ASM27016v1	21633709	ATCC 43144
Corynebacterium diphtheriae	1717	PRJNA341832	341832	Terrabacteria group	Actinobacteria	2.52557	53.3	-	MIOQ01	159	2446	2243	11/10/16	8/24/17	Contig	National Institute for Communicable Diseases	SAMN05729436	GCA_001876335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/335/GCA_001876335.1_ASM187633v1	28726616	ST378-KZN-2016-48347
Sinorhizobium meliloti	382	PRJEB16600	349918	Proteobacteria	Alphaproteobacteria	6.86002	62.1	-	FNOO01	117	6925	6346	10/22/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04244576	GCA_900107055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/055/GCA_900107055.1_IMG-taxon_2597490346_annotated_assembly	-	DSM 23914
Bordetella bronchiseptica F2	1331213	PRJNA202125	202125	Proteobacteria	Betaproteobacteria	5.38052	68	-	JGXB01	164	5238	4995	5/12/14	4/2/17	Contig	JCVI	SAMN02231450	GCA_000690255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/255/GCA_000690255.1_gbb17v01	25908122	F2
Taylorella equigenitalis MCE9	937774	PRJNA61285	61285	Proteobacteria	Betaproteobacteria	1.69586	37.4	chromosome:NC_014914.1/CP002456.1	-	1	1577	1512	1/7/11	4/7/17	Complete Genome	"Agence Nationale de Securite Sanitaire de l'alimentation, de l'environnement et du travail (Anses), Laboratoire de pathologie equine de Dozule, Goustranville, 14430 Dozule, France"	SAMN02602972	GCA_000185745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/745/GCA_000185745.1_ASM18574v1	21278298	MCE9
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31112	57.2358	chromosome 1:NZ_CP018552.1/CP018552.1; chromosome 2:NZ_CP018553.1/CP018553.1	-	2	3373	3146	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932978	GCA_002191715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/715/GCA_002191715.1_ASM219171v1	28388689	BwIM_TUR_38
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.73771	46.7	-	JUII01	533	2880	2269	7/1/15	4/10/17	Contig	Wageningen University	SAMN03196654	GCA_001044075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/075/GCA_001044075.1_ASM104407v1	26048937	Lr138
Pasteurella multocida	747	PRJNA301781	301781	Proteobacteria	Gammaproteobacteria	2.27617	40.3	-	LNCO01	23	2133	2055	1/11/16	4/5/17	Contig	Monash University Malaysia	SAMN04259798	GCA_001510775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/775/GCA_001510775.1_ASM151077v1	26941132	SMC1
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.1321	41.2	-	CVZD01	78	2068	1890	6/23/15	3/26/17	Contig	SC	SAMEA1032793	GCA_001175665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/665/GCA_001175665.1_6903_2_12	-	EQUI0061
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.85388	66.6	-	JUMR01	208	4523	4399	7/10/15	3/26/17	Contig	University of Washington	SAMN03198161	GCA_001075445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/445/GCA_001075445.1_ASM107544v1	26230489	941_SMAL
Bacillus amyloliquefaciens	1390	PRJNA349099	349099	Terrabacteria group	Firmicutes	3.92677	46.1	-	MOEA01	16	3987	3824	11/4/16	4/5/17	Contig	Kasetsart university	SAMN05920291	GCA_001866745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/745/GCA_001866745.1_ASM186674v1	-	K2
Chlamydia psittaci	83554	PRJNA245047	245047	PVC group	Chlamydiae	1.16954	39.1	-	JMEI01	28	1036	985	5/9/14	4/2/17	Contig	BGI-TJ	SAMN02731088	GCA_000687415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/415/GCA_000687415.1_PsittaciChina1.0_for_CB3	24903864	CB3
Enterococcus faecium Com12	565662	PRJNA32965	32965	Terrabacteria group	Firmicutes	2.71374	38.2	-	ACBC01	19	2698	2539	5/20/09	3/22/17	Scaffold	Broad Institute	SAMN02595273	GCA_000157635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/635/GCA_000157635.1_ASM15763v1	-	Com12
Neisseria gonorrhoeae MIA_2011_02_02	1351788	PRJNA209502	209502	Proteobacteria	Betaproteobacteria	2.09879	52.5	-	ATQM01	342	2374	2126	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02338814	GCA_001025645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/645/GCA_001025645.1_ASM102564v1	-	MIA_2011_02_02
Streptococcus mutans TCI-219	1074160	PRJNA72063	72063	Terrabacteria group	Firmicutes	1.80927	37	-	AGLO01	131	1826	1718	10/6/11	3/22/17	Contig	JCVI	SAMN02436607	GCA_000229465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/465/GCA_000229465.2_SMUT6-NEX_9-219	-	TCI-219
Enterococcus faecalis TX1341	749514	PRJNA47183	47183	Terrabacteria group	Firmicutes	2.99999	37.2	-	AECF01	38	3064	2951	9/8/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189124	GCA_000148225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/225/GCA_000148225.1_ASM14822v1	-	TX1341
Brucella suis F4/06-146	1198694	PRJNA176534	176534	Proteobacteria	Alphaproteobacteria	3.3171	57.2	-	AQNY01	11	3383	3161	4/16/13	4/1/17	Contig	Broad Institute	SAMN01047745	GCA_000365705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/705/GCA_000365705.1_Bruc_suis_F4_06-146_V1	-	F4/06-146
Treponema pallidum subsp. pallidum	161	PRJNA322283	322283	Spirochaetes	Spirochaetia	1.13916	52.8	chromosome:NZ_CP016069.1/CP016069.1	-	1	1064	1001	8/25/16	4/5/17	Chromosome	"National Institute of Health, Portugal"	SAMN05150777	GCA_001713335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/335/GCA_001713335.1_ASM171333v1	-	PT_SIF1348
Borrelia burgdorferi IPT77	1408874	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.01779	28.7	-	AYBX01	610	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378841	GCA_000502015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/015/GCA_000502015.1_BorBurgIPT77	-	IPT77
Clostridium botulinum	1491	PRJNA290143	290143	Terrabacteria group	Firmicutes	3.00125	27.9	-	LHYV01	145	2873	2753	8/12/15	3/26/17	Scaffold	Anses	SAMN03876605	GCA_001266995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/995/GCA_001266995.1_ASM126699v1	26430029	71840-CD
Listeria seeligeri serovar 1/2b str. SLCC3954	683837	PRJEA41123	41123	Terrabacteria group	Firmicutes	2.79764	37.4	chromosome:NC_013891.1/FN557490.1	-	1	2790	2663	2/18/10	2/26/17	Complete Genome	PathoGenoMik	SAMEA2272547	GCA_000027145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/027/145/GCA_000027145.1_ASM2714v1	20061480	SLCC3954
Salinispora arenicola CNH964	1136430	PRJNA169833	169833	Terrabacteria group	Actinobacteria	5.91299	69.4	-	JAEY01	70	5394	5011	1/10/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02584921	GCA_000519145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/145/GCA_000519145.1_ASM51914v1	-	CNH964
Lactobacillus casei	1582	PRJNA302242	302242	Terrabacteria group	Firmicutes	3.03956	46.3	-	LTDP01	194	3008	2817	5/1/16	4/5/17	Scaffold	South China University of Technology	SAMN04270890	GCA_001636215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/215/GCA_001636215.1_ASM163621v1	-	BM-LC14617
[Clostridium] cellulolyticum H10	394503	PRJNA17419	17419	Terrabacteria group	Firmicutes	4.06872	37.4	chromosome:NC_011898.1/CP001348.1	-	1	3518	3337	1/13/09	8/28/17	Complete Genome	US DOE Joint Genome Institute	SAMN00623037	GCA_000022065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/065/GCA_000022065.1_ASM2206v1	-	H10; ATCC 35319
Vibrio parahaemolyticus	670	PRJNA267224	267224	Proteobacteria	Gammaproteobacteria	5.03744	45.2	-	JTGQ01	166	4803	4592	11/25/14	3/16/17	Scaffold	Bureau of Food Surveillance and Science Integration	SAMN03195665	GCA_000786835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/835/GCA_000786835.1_T12739	25635013	T12739
Streptococcus mitis	28037	PRJNA268403	268403	Terrabacteria group	Firmicutes	2.11068	40.1	-	LBMT01	6	2104	1931	2/22/17	2/24/17	Scaffold	Xinqiao Hospital of Third military medical university	SAMN03219950	GCA_002005545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/545/GCA_002005545.1_ASM200554v1	-	321A
Oenococcus oeni IOEB_L40_4	1428429	PRJNA229556	229556	Terrabacteria group	Firmicutes	1.73138	37.9	-	AZLQ01	61	1773	1595	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02904299	GCA_000761975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/975/GCA_000761975.1_Oeoe_IOEB_L40_4_1.0	24901216	IOEB_L40_4
Xanthomonas oryzae pv. oryzae	64187	PRJNA269398	269398	Proteobacteria	Gammaproteobacteria	4.23715	63.9	-	JXDU01	411	4190	3392	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252497	GCA_001927495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/495/GCA_001927495.1_ASM192749v1	-	BXO416
Campylobacter fetus subsp. venerealis CCUG 33872	1273276	PRJNA184005	184005	Proteobacteria	delta/epsilon subdivisions	1.92512	33	-	LREU01	101	2004	1874	8/5/16	4/5/17	Contig	Utrecht University	SAMN04419569	GCA_001699645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/645/GCA_001699645.1_ASM169964v1	27333878	CCUG 33872
Xanthomonas citri subsp. citri	611301	PRJEB7163	306120	Proteobacteria	Gammaproteobacteria	5.26748	64.6931	chromosome XAC40:LN606820.1; plasmid XAC40_p1:LN606821.1; plasmid XAC40_p2:LN606822.1	CCWX01	67	9254	8908	12/16/15	12/16/15	Chromosome	Genoscope CEA	SAMEA2752396	GCA_001494675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/675/GCA_001494675.1_ASX_PRJEB7163_v1	-	-
Lactobacillus delbrueckii subsp. delbrueckii DSM 20074 = JCM 1012	1423823	PRJDB634	243212	Terrabacteria group	Firmicutes	1.72509	50.2	-	BALP01	150	-	-	4/1/14	7/24/15	Contig	The University of Tokyo	SAMD00016569	GCA_000615095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/095/GCA_000615095.1_ASM61509v1	-	JCM 1012
Yersinia pseudotuberculosis	633	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.92838	47.4	-	CIFM01	101	4617	4284	4/21/15	4/4/17	Scaffold	SC	SAMEA859897	GCA_001319685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/685/GCA_001319685.1_5139_3_6	-	IP32921
Brucella abortus bv. 1 str. NI486	1051057	PRJNA74325	74325	Proteobacteria	Alphaproteobacteria	3.2857	57.2	-	AGVH01	4	3377	3150	2/3/12	3/23/17	Scaffold	Broad Institute	SAMN02596741	GCA_000245855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/855/GCA_000245855.1_Bruc_abor_bv1_NI486_V1	-	NI486
Francisella tularensis subsp. tularensis MA00-2987	543737	PRJNA30443	30443	Proteobacteria	Gammaproteobacteria	1.87187	32.1	-	ABRI01	19	1920	1573	8/26/08	3/30/17	Scaffold	Broad Institute	SAMN02595231	GCA_000155535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/535/GCA_000155535.1_ASM15553v1	-	MA00-2987
Shigella boydii	621	PRJNA293196	293196	Proteobacteria	Gammaproteobacteria	4.384	50.8	-	LPSV01	429	5010	4172	12/15/16	2/26/17	Contig	"University of Maryland, School of Medicine"	SAMN04001712	GCA_001906445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/445/GCA_001906445.1_ASM190644v1	-	102309
Clostridioides difficile E16	1215065	PRJEB194	222736	Terrabacteria group	Firmicutes	4.25278	28.7	-	CAMH01	111	3952	3792	10/14/13	3/15/17	Scaffold	LPBA	SAMEA3138906	GCA_000531385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/385/GCA_000531385.1_E16	24482682	E16
Vibrio cholerae B33	417400	PRJNA18499	18499	Proteobacteria	Gammaproteobacteria	4.04373	47.4	-	AAWE01	200	3924	3587	1/3/07	3/22/17	Scaffold	TIGR	SAMN02471145	GCA_000153965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/965/GCA_000153965.1_ASM15396v1	-	B33
Ralstonia solanacearum FJAT-1458	1130828	PRJNA80749	80749	Proteobacteria	Betaproteobacteria	5.43457	66.3	-	AHIX01	1447	5352	4373	1/16/13	5/19/17	Contig	"FJAT, Fujian Academy of Agriculture Sciences, China"	SAMN02469797	GCA_000331895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/895/GCA_000331895.1_FJAT-1458	-	FJAT-1458
Bacillus thuringiensis serovar tochigiensis BGSC 4Y1	527024	PRJNA29713	29713	Terrabacteria group	Firmicutes	5.62591	34.9	chromosome:NZ_CM000746.1/CM000746.1	ACMY01	1	11873	11319	4/30/09	6/15/17	Chromosome	Naval Medical Research Center	SAMN00727630	GCA_000161475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/475/GCA_000161475.1_ASM16147v1	22645259	BGSC 4Y1
Burkholderia mallei GB8 horse 4	320390	PRJNA13945	13945	Proteobacteria	Betaproteobacteria	5.80486	68.5	-	AAHO01	181	6190	5683	6/9/05	5/18/17	Contig	TIGR	SAMN02435863	GCA_000167635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/635/GCA_000167635.1_ASM16763v1	-	GB8 horse 4
Haemophilus somnus 2336	228400	PRJNA388	388	Proteobacteria	Gammaproteobacteria	2.26386	37.4	chromosome:NC_010519.1/CP000947.1	-	1	2114	1984	2/26/08	3/30/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598524	GCA_000019405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/405/GCA_000019405.1_ASM1940v1	-	2336
Pediococcus pentosaceus ATCC 25745	278197	PRJNA398	398	Terrabacteria group	Firmicutes	1.83239	37.4	chromosome:NC_008525.1/CP000422.1	-	1	1812	1716	10/13/06	3/29/17	Complete Genome	"US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc."	SAMN02598525	GCA_000014505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/505/GCA_000014505.1_ASM1450v1	17030793	ATCC 25745
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.65768	67	-	MUQB01	102	7309	6928	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001809	GCA_001991155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/155/GCA_001991155.1_ASM199115v1	-	VC6579
Lactobacillus reuteri	1598	PRJNA248653	248653	Terrabacteria group	Firmicutes	2.06605	38.6	-	JOSX01	25	2080	1804	6/26/14	4/2/17	Scaffold	University of Alberta	SAMN02800394	GCA_000712555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/555/GCA_000712555.1_LTH2584	-	LTH2584
Bacteroides fragilis str. J38-1	1339272	PRJNA206103	206103	FCB group	Bacteroidetes/Chlorobi group	5.14474	43.4	-	JGDV01	120	4563	4287	3/20/14	4/18/17	Contig	IGS	SAMN02314412	GCA_000598645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/645/GCA_000598645.1_ASM59864v1	-	J38-1
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.42801	50.9	-	CXNL01	237	4836	4250	7/16/15	2/24/17	Contig	SC	SAMEA2055842	GCA_001255115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/115/GCA_001255115.1_9870_6_64	-	144357
Erysipelothrix larvae	1514105	PRJNA295643	295643	Terrabacteria group	Firmicutes	2.51149	37.3961	chromosome:NZ_CP013213.1/CP013213.1; plasmid unnamed:NZ_CP013214.1/CP013214.1	-	2	2390	2287	2/2/16	4/24/17	Complete Genome	Korea Research Institute Bioscience and Biotechnology	SAMN04087214	GCA_001545095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/095/GCA_001545095.1_ASM154509v1	-	LV19
Bacillus licheniformis	1402	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.32214	45.9	-	NPBU01	104	4547	4389	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372695	GCA_002272005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/005/GCA_002272005.1_assembly-7525_v1	-	7525
Vibrio vulnificus NBRC 15645 = ATCC 27562	1219061	PRJDB340	172309	Proteobacteria	Gammaproteobacteria	4.82899	46.7	-	BCUB01	106	4461	4277	2/23/16	4/5/17	Contig	National Institute of Technology and Evaluation	SAMD00046713	GCA_001591065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/065/GCA_001591065.1_ASM159106v1	-	NBRC 15645
Pseudomonas syringae pv. syringae	321	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	6.07308	59	-	LJRK01	179	5453	5087	10/20/15	3/27/17	Scaffold	University of Toronto	SAMN03976255	GCA_001401075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/075/GCA_001401075.1_PsyICMP3023	-	ICMP3023
Streptococcus suis 22083	1214184	PRJNA171418	171418	Terrabacteria group	Firmicutes	2.02465	41.5	-	ALKY01	42	1970	1877	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02470632	GCA_000440395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/395/GCA_000440395.1_version1	-	22083
Streptococcus agalactiae	1311	PRJNA258349	258349	Terrabacteria group	Firmicutes	2.04796	35.6	chromosome:NZ_CP011326.1/CP011326.1	-	1	2096	1952	8/3/15	3/17/17	Chromosome	GUANGXI ACADEMY OF FISHERY SCIENCES	SAMN02996604	GCA_001190825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/190/825/GCA_001190825.1_ASM119082v1	26537657	YM001
Pediococcus pentosaceus	1255	PRJNA390207	390207	Terrabacteria group	Firmicutes	1.86979	37.3785	chromosome:NZ_CP021927.1/CP021927.1; plasmid pPP194-1:NZ_CP021926.1/CP021926.1; plasmid pPP194-2:NZ_CP021928.1/CP021928.1	-	3	1849	1721	6/20/17	6/22/17	Complete Genome	Microbial Institute for Fermentation Industry	SAMN07224387	GCA_002202155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/155/GCA_002202155.1_ASM220215v1	-	SRCM100194
Enterococcus faecalis 62	936153	PRJNA61185	61185	Terrabacteria group	Firmicutes	3.13082	37.3617	chromosome:CP002491.1;  EF62phi:NC_017732.1/CP002495.1; plasmid EF62pA:CP002492.1; plasmid EF62pB:CP002493.1; plasmid EF62pC:CP002494.1	-	5	3157	3075	2/16/11	1/31/14	Complete Genome	"Laboratory of Microbial Gene Technology and Food Microbiology, Department of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences"	SAMN02603509	GCA_000211255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/211/255/GCA_000211255.2_ASM21125v2	"1,939,307,821,398,540"	62
Lactobacillus kefiranofaciens ZW3	1033837	PRJNA66525	66525	Terrabacteria group	Firmicutes	2.35409	37.3604	chromosome:NC_015602.1/CP002764.1; plasmid pWW1:NC_015598.1/CP002765.1; plasmid pWW2:NC_015603.1/CP002766.1	-	3	2336	2014	5/25/11	4/7/17	Complete Genome	TianJin university of science and technology	SAMN02603965	GCA_000214785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/785/GCA_000214785.1_ASM21478v1	21705607	ZW3
Bifidobacterium longum subsp. longum CECT 7347	1205679	PRJEB107	173411	Terrabacteria group	Actinobacteria	2.32722	60	-	CALH01	128	2085	1855	9/6/13	4/3/17	Contig	BIOPOLIS	SAMEA3146249	GCA_001050555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/555/GCA_001050555.1_ASM105055v1	-	CECT 7347
Shigella flexneri 2a	42897	PRJNA278281	278281	Proteobacteria	Gammaproteobacteria	4.54659	50.4	-	LAHY01	352	5142	4312	6/1/15	3/5/17	Contig	U.S. Food and Drug Administration	SAMN03418661	GCA_001017305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/305/GCA_001017305.1_ASM101730v1	25980352	BS1024
Enterococcus faecalis ATCC 29212	1201292	PRJNA244550	244550	Terrabacteria group	Firmicutes	3.04813	37.3559	chromosome:NZ_CP008816.1/CP008816.1; plasmid 1:NZ_CP008815.1/CP008815.1; plasmid 2:NZ_CP008814.1/CP008814.1	-	3	3128	2922	8/22/14	3/24/17	Complete Genome	Los Alamos National Laboratory	SAMN02870637	GCA_000742975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/975/GCA_000742975.1_ASM74297v1	25291775	ATCC 29212
Pseudomonas putida	303	PRJNA284837	284837	Proteobacteria	Gammaproteobacteria	5.80588	62.5	-	LDPF01	292	5528	5231	6/15/15	4/3/17	Contig	National Environmental Engineering Research Institute-CSIR	SAMN03733491	GCA_001027965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/965/GCA_001027965.1_ASM102796v1	-	SF1
Leptospira interrogans serovar Grippotyphosa str. UI 12764	1049904	PRJNA74119	74119	Spirochaetes	Spirochaetia	5.0776	35.1	-	AHNS02	73	4666	4192	1/24/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436430	GCA_000244315.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/315/GCA_000244315.3_LintUI12764v0.2	-	UI 12764
Enterococcus faecalis V583	226185	PRJNA70	70	Terrabacteria group	Firmicutes	3.35997	37.3546	chromosome:NC_004668.1/AE016830.1; plasmid pTEF1:NC_004669.1/AE016833.1; plasmid pTEF2:NC_004671.1/AE016831.1; plasmid pTEF3:NC_004670.1/AE016832.1	-	4	3412	3264	3/28/03	8/28/16	Complete Genome	TIGR	SAMN02603978	GCA_000007785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/785/GCA_000007785.1_ASM778v1	"126,639,271,591,751,000,000,000"	V583
Listeria innocua Clip11262	272626	PRJNA86	86	Terrabacteria group	Firmicutes	3.09311	37.3497	chromosome:NC_003212.1/AL592022.1; plasmid pLI100:NC_003383.1/AL592102.1	-	2	3218	3078	11/8/01	2/26/17	Complete Genome	Institut Pasteur	SAMEA3138320	GCA_000195795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/795/GCA_000195795.1_ASM19579v1	11679669	Clip11262
Taylorella equigenitalis	29575	PRJNA385665	385665	Proteobacteria	Betaproteobacteria	1.73905	37.3	chromosome:NZ_CP021200.1/CP021200.1	-	1	1621	1547	9/8/17	9/11/17	Complete Genome	USDA APHIS VS NVSL	SAMN06899366	GCA_002288155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/155/GCA_002288155.1_ASM228815v1	-	15-1587
Streptococcus pneumoniae PCS8203	1159082	PRJNA89167	89167	Terrabacteria group	Firmicutes	2.14135	39.6	-	AKQW01	38	2369	2042	1/29/13	3/9/17	Scaffold	Washington University	SAMN02299519	GCA_000334555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/555/GCA_000334555.1_ASM33455v1	-	PCS8203
Virgibacillus necropolis	163877	PRJNA392614	392614	Terrabacteria group	Firmicutes	4.33742	37.3	chromosome:NZ_CP022437.1/CP022437.1	-	1	4134	3965	7/24/17	7/28/17	Complete Genome	Kyung Hee University	SAMN07303562	GCA_002224365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/365/GCA_002224365.1_ASM222436v1	12710619	LMG 19488
Anaerostipes hadrus	649756	PRJNA244280	244280	Terrabacteria group	Firmicutes	3.17261	37.3	chromosome:NZ_CP012098.1/CP012098.1	-	1	3147	2911	2/14/17	4/6/17	Complete Genome	Shanghai Jiao Tong University	SAMN02725021	GCA_001998765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/765/GCA_001998765.1_ASM199876v1	27264309	BPB5
Haemophilus influenzae	727	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.92983	38.1	-	JVCL01	45	1985	1847	7/10/15	3/26/17	Contig	University of Washington	SAMN03197751	GCA_001057195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/195/GCA_001057195.1_ASM105719v1	26230489	552_HINF
Prochlorococcus marinus str. MIT 1313	1801624	PRJNA311920	311920	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.59034	50	-	LVHN01	28	2668	2625	4/25/16	4/25/16	Contig	MIT	SAMN04490360	GCA_001632065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/065/GCA_001632065.1_ASM163206v1	-	MIT 1313
Mycobacterium bovis	1765	PRJNA214551	214551	Terrabacteria group	Actinobacteria	4.32045	65.5	-	JQEU01	84	4272	4031	9/8/14	4/2/17	Contig	South American Mycobacterium bovis WGS	SAMN02902643	GCA_000749825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/825/GCA_000749825.1_ASM74982v1	-	50
Mycobacterium avium 10-5581	1392000	PRJNA216939	216939	Terrabacteria group	Actinobacteria	5.33019	69	-	AYNT01	325	5055	4352	12/9/13	4/2/17	Contig	National Animal Disease Center	SAMN02470593	GCA_000504805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/805/GCA_000504805.1_MAC_5581_version_1	-	Oct-81
Clostridium perfringens	1502	PRJNA327448	327448	Terrabacteria group	Firmicutes	3.6121	28	-	MARW01	76	3335	3149	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323898	GCA_001949595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/595/GCA_001949595.1_ASM194959v1	28062388	JFP922
Xanthomonas campestris	339	PRJNA283309	283309	Proteobacteria	Gammaproteobacteria	5.17366	65.5	-	LHBV01	221	4516	4207	8/11/15	4/4/17	Contig	FDA	SAMN03897580	GCA_001266525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/525/GCA_001266525.1_CFSAN033088	-	CFSAN033088
Lactococcus lactis subsp. lactis JCM 5805 = NBRC 100933	1236944	PRJDB643	243222	Terrabacteria group	Firmicutes	2.527	35.2	-	BALX01	88	2571	2206	4/1/14	4/2/17	Contig	The University of Tokyo	SAMD00008943	GCA_000615405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/405/GCA_000615405.1_ASM61540v1	-	JCM 5805
Cuniculiplasma divulgatum	1673428	PRJEB12276	309795	Euryarchaeota	Thermoplasmata	1.9387	37.3	chromosome I:LT671858.1	-	1	2016	1905	12/14/16	12/14/16	Complete Genome	Immanuel Kant Baltic Federal University	SAMEA3719625	GCA_900083515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/515/GCA_900083515.1_ASM90008351v1	-	S5(T) (=JCM 30642; =VKM B-2941)
Staphylococcus epidermidis NIH08001	1155135	PRJNA86765	86765	Terrabacteria group	Firmicutes	2.50945	32.1	-	AKHG01	68	2515	2339	7/9/12	3/23/17	Contig	NIH-NISC	SAMN00993450	GCA_000276065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/065/GCA_000276065.1_ASM27606v1	-	NIH08001
Virgibacillus sp. 6R	1911587	PRJNA349088	349088	Terrabacteria group	Firmicutes	4.74939	37.3	chromosome:NZ_CP017762.1/CP017762.1	-	1	4289	4045	12/9/16	4/16/17	Complete Genome	Shanghai Ocean University	SAMN05920239	GCA_001895305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/305/GCA_001895305.1_ASM189530v1	-	6R
Yersinia pestis 2501	1194970	PRJNA167473	167473	Proteobacteria	Gammaproteobacteria	4.59732	47.5	-	AKVQ01	185	4319	4098	7/2/12	5/19/17	Scaffold	BGI	SAMN02402990	GCA_000275685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/685/GCA_000275685.1_ASM27568v1	22965078	2501
Pseudomonas fluorescens S12	1383069	PRJNA214469	214469	Proteobacteria	Gammaproteobacteria	6.36933	60.7	-	AVFN01	332	5764	5547	11/22/13	4/2/17	Contig	University of Malaya	SAMN02304012	GCA_000498415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/415/GCA_000498415.1_De_Novo_Assembly	-	S12
Staphylococcus pseudintermedius	283734	PRJNA319397	319397	Terrabacteria group	Firmicutes	2.84121	37.3	chromosome:NZ_CP016072.1/CP016072.1	-	1	2787	2551	7/8/16	4/10/17	Complete Genome	University of Tennessee	SAMN05181828	GCA_001682335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/335/GCA_001682335.1_ASM168233v1	-	NA45
Lysinibacillus sphaericus	1421	PRJNA315681	315681	Terrabacteria group	Firmicutes	4.6928	37.3	chromosome:NZ_CP015224.1/CP015224.1	-	1	4622	4334	4/22/16	4/5/17	Complete Genome	CIMIC Uniandes	SAMN04568231	GCA_001629735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/629/735/GCA_001629735.1_ASM162973v1	27284157	2362
Bacteroidetes bacterium UKL13-3	1690483	PRJNA312233	312233	FCB group	Bacteroidetes/Chlorobi group	3.23653	37.3	chromosome:CP012155.1	-	1	2850	2598	3/30/16	3/30/16	Complete Genome	Oregon State University	SAMN03894428	GCA_001602415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/415/GCA_001602415.1_ASM160241v1	-	-
Chryseobacterium gallinarum	1324352	PRJNA265816	265816	FCB group	Bacteroidetes/Chlorobi group	4.63363	37.3	chromosome:NZ_CP009928.1/CP009928.1	-	1	4173	4021	6/8/15	4/10/17	Complete Genome	"Shin's Lab., Kyungpook National University"	SAMN03152363	GCA_001021975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/975/GCA_001021975.1_ASM102197v1	-	DSM 27622
Fermentimonas caenicola	1562970	PRJEB7091	264879	FCB group	Bacteroidetes/Chlorobi group	2.80893	37.3	chromosome I:NZ_LN515532.1/LN515532.1	-	1	2415	2319	10/15/14	4/10/17	Complete Genome	CEBITEC	SAMEA2724983	GCA_000953535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/535/GCA_000953535.1_E5B	-	-
Pediococcus pentosaceus SL4	1408206	PRJNA222573	222573	Terrabacteria group	Firmicutes	1.78914	37.3	chromosome:NC_022780.1/CP006854.1	-	1	1784	1674	11/8/13	4/2/17	Complete Genome	The Technical University of Denmark	SAMN02603952	GCA_000496265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/265/GCA_000496265.1_ASM49626v1	24371205	SL4
Pseudomonas fluorescens FH5	1284404	PRJNA186801	186801	Proteobacteria	Gammaproteobacteria	6.17843	60	-	AOJA01	87	5691	5514	12/19/13	4/4/17	Contig	University of Exeter	SAMN02597452	GCA_000511155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/155/GCA_000511155.2_v1	24286439	FH5
Yersinia pestis EV76-CN	665028	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.33697	47.8	-	ADSA02	474	4160	3894	12/7/12	3/24/17	Scaffold	Beijing Genomics Institute	SAMN02403074	GCA_000324805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/805/GCA_000324805.2_EV76-CN	23271803	EV76-CN
Taylorella equigenitalis ATCC 35865	743973	PRJNA73729	73729	Proteobacteria	Betaproteobacteria	1.73212	37.3	chromosome:NC_018108.1/CP003264.1	-	1	1619	1536	7/9/12	4/7/17	Complete Genome	University of Bristol	SAMN02604145	GCA_000276685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/685/GCA_000276685.1_ASM27668v1	22541164	ATCC 35865
Staphylococcus epidermidis NIH04008	979222	PRJNA62395	62395	Terrabacteria group	Firmicutes	2.73759	32	-	AKHF01	130	2785	2567	7/9/12	3/23/17	Contig	NISC - NIH Intramural Sequencing Center	SAMN00993294	GCA_000276085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/085/GCA_000276085.1_ASM27608v1	-	NIH04008
Bacillus cereus	1396	PRJNA376851	376851	Terrabacteria group	Firmicutes	5.78633	35.3377	chromosome:NZ_CP020937.1/CP020937.1; plasmid pBC244:NZ_CP020938.1/CP020938.1; plasmid pBC52:NZ_CP020939.1/CP020939.1; plasmid pBCXO1:NZ_CP020940.1/CP020940.1; plasmid pBCXO2:NZ_CP020941.1/CP020941.1	-	5	6226	5779	5/2/17	5/6/17	Chromosome	Key Laboratory of Jilin Province for Zoonosis Prevention and Control Changchun	SAMN06448760	GCA_002117465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/465/GCA_002117465.1_ASM211746v1	-	BC-AK
Lactococcus lactis subsp. lactis	1360	PRJNA239124	239124	Terrabacteria group	Firmicutes	2.48081	35.1	-	JNLP01	1	2512	2299	6/11/14	4/2/17	Contig	DOE Joint Genome Institute	SAMN02841213	GCA_000703145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/145/GCA_000703145.1_ASM70314v1	-	511
Xanthomonas campestris	339	PRJNA283309	283309	Proteobacteria	Gammaproteobacteria	5.13456	65.5	-	LHBW01	213	4490	4159	8/11/15	4/4/17	Contig	FDA	SAMN03897581	GCA_001266535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/535/GCA_001266535.1_CFSAN033089	-	CFSAN033089
Clostridium perfringens	1502	PRJNA327449	327449	Terrabacteria group	Firmicutes	3.58971	28	-	MARX01	48	3288	3127	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323899	GCA_001949615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/615/GCA_001949615.1_ASM194961v1	28062388	JFP923
Mycobacterium avium subsp. hominissuis 10-5606	1381559	PRJNA214087	214087	Terrabacteria group	Actinobacteria	5.52927	68.7	-	AYNU01	1690	5496	3931	12/9/13	4/10/17	Contig	National Animal Disease Center	SAMN02470589	GCA_000504825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/825/GCA_000504825.1_MAH_5606_version_1	-	Oct-06
Mycobacterium bovis	1765	PRJNA272571	272571	Terrabacteria group	Actinobacteria	4.30487	65.6	-	JXTK01	50	4219	4002	2/20/15	4/3/17	Contig	Animal and Plant Quarantine Agency	SAMN03290670	GCA_000878485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/485/GCA_000878485.1_ASM87848v1	26659693	W-1171
Prochlorococcus marinus str. MIT 1327	1801626	PRJNA311924	311924	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.59159	50.3	-	LVHR01	34	2667	2627	4/25/16	4/25/16	Contig	MIT	SAMN04490364	GCA_001632125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/125/GCA_001632125.1_ASM163212v1	-	MIT 1327
Haemophilus influenzae	727	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.93731	38.2	-	JURC01	47	1899	1775	7/10/15	3/26/17	Contig	University of Washington	SAMN03198046	GCA_001059185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/185/GCA_001059185.1_ASM105918v1	26230489	839_HINF
Solitalea canadensis DSM 3403	929556	PRJNA60421	60421	FCB group	Bacteroidetes/Chlorobi group	5.20207	37.3	chromosome:NC_017770.1/CP003349.1	-	1	4431	4283	3/8/12	5/19/17	Complete Genome	DOE Joint Genome Institute	SAMN02232052	GCA_000242635.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/635/GCA_000242635.3_ASM24263v3	-	DSM 3403
Clostridium sp. BNL1100	755731	PRJNA81613	81613	Terrabacteria group	Firmicutes	4.61375	37.3	chromosome:NC_016791.1/CP003259.1	-	1	4020	3863	1/25/12	5/18/17	Complete Genome	JGI	SAMN02261430	GCA_000244875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/875/GCA_000244875.1_ASM24487v1	23209234	BNL1100
Streptococcus pneumoniae PCS125219	1159084	PRJNA89171	89171	Terrabacteria group	Firmicutes	2.05429	39.7	-	AKQX01	51	2289	2040	1/29/13	3/9/17	Scaffold	Washington University	SAMN02299520	GCA_000334575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/575/GCA_000334575.1_ASM33457v1	-	PCS125219
Dokdonia sp. 4H-3-7-5	983548	PRJNA62895	62895	FCB group	Bacteroidetes/Chlorobi group	3.38999	37.3	chromosome:NC_015496.1/CP002528.1	-	1	3011	2948	5/5/11	9/3/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713609	GCA_000212355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/212/355/GCA_000212355.1_ASM21235v1	21725025	4H-3-7-5
Treponema putidum	221027	PRJNA257943	257943	Spirochaetes	Spirochaetia	2.80056	37.296	chromosome:NZ_CP009228.1/CP009228.1; plasmid pTPu1:NZ_CP009229.1/CP009229.1	-	2	2577	2272	9/16/14	4/17/17	Complete Genome	The University of Hong Kong	SAMN02980915	GCA_000755145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/145/GCA_000755145.1_ASM75514v1	25342686	OMZ 758
Enterococcus sp. MN05	2005703	PRJNA388020	388020	Terrabacteria group	Firmicutes	4.15595	37.2798	chromosome:NZ_CP021874.1/CP021874.1; plasmid unnamed2:NZ_CP021875.1/CP021875.1; plasmid unnamed3:NZ_CP021876.1/CP021876.1; plasmid unnamed4:NZ_CP021877.1/CP021877.1; plasmid unnamed5:NZ_CP021878.1/CP021878.1	-	5	4197	4048	6/19/17	6/22/17	Complete Genome	Chinese Center for Disease Control and Prevention	SAMN07171652	GCA_002197645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/645/GCA_002197645.1_ASM219764v1	-	MN05
Leptospira interrogans serovar Grippotyphosa str. UI 12769	1049905	PRJNA74121	74121	Spirochaetes	Spirochaetia	4.90069	35	-	AHNT02	94	4431	4011	1/24/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436501	GCA_000244335.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/335/GCA_000244335.3_gls454107v02	-	UI 12769
Pseudomonas putida	303	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.24298	62	-	JUST01	576	5958	5504	7/10/15	4/3/17	Contig	University of Washington	SAMN03198003	GCA_001066335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/335/GCA_001066335.1_ASM106633v1	26230489	791_PPUT
Pediococcus pentosaceus	1255	PRJNA386763	386763	Terrabacteria group	Firmicutes	2.00247	37.269	chromosome:NZ_CP021474.1/CP021474.1; plasmid pPC892-1:NZ_CP021471.1/CP021471.1; plasmid pPC892-2:NZ_CP021472.1/CP021472.1; plasmid pPC892-3:NZ_CP021473.1/CP021473.1; plasmid pPC892-4:NZ_CP021475.1/CP021475.1; plasmid pPC892-5:NZ_CP021476.1/CP021476.1; plasmid pPC892-6:NZ_CP021477.1/CP021477.1	-	7	2078	1600	6/6/17	8/4/17	Complete Genome	Microbial Institiue for Fermentation Industry	SAMN07126152	GCA_002173535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/535/GCA_002173535.1_ASM217353v1	-	SRCM100892
Shigella flexneri 2a	42897	PRJNA278281	278281	Proteobacteria	Gammaproteobacteria	4.52959	50.6	-	LAHV01	434	5052	4274	6/1/15	3/5/17	Contig	U.S. Food and Drug Administration	SAMN03418656	GCA_001017345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/345/GCA_001017345.1_ASM101734v1	25980352	BS1021
Bifidobacterium longum subsp. infantis	1682	PRJEB7787	272908	Terrabacteria group	Actinobacteria	2.4677	59.9	-	CDPT01	1	2202	2028	1/28/15	4/3/17	Contig	Ordesa	SAMEA3158508	GCA_001051015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/015/GCA_001051015.1_ASM105101v1	-	CECT 7210
Pediococcus pentosaceus	1255	PRJNA260124	260124	Terrabacteria group	Firmicutes	1.83063	37.2581	chromosome:NZ_CP015918.1/CP015918.1; plasmid unnamed1:NZ_CP015919.1/CP015919.1; plasmid unnamed2:NZ_CP015920.1/CP015920.1; plasmid unnamed3:NZ_CP015921.1/CP015921.1	-	4	1789	1676	6/8/16	4/5/17	Complete Genome	WIKIM	SAMN04017317	GCA_001411765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/765/GCA_001411765.2_ASM141176v2	-	wikim20
Listeria ivanovii subsp. ivanovii	202751	PRJEB6403	251923	Terrabacteria group	Firmicutes	2.91955	37.2	chromosome 1:NZ_LT906478.1/LT906478.1	-	1	2913	2739	8/15/17	8/28/17	Complete Genome	SC	SAMEA4362421	GCA_900187025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/025/GCA_900187025.1_49923_F01	-	NCTC11846
Listeria ivanovii subsp. ivanovii	202751	PRJEB6403	251923	Terrabacteria group	Firmicutes	2.91955	37.2	chromosome 1:NZ_LT906466.1/LT906466.1	-	1	2913	2738	8/15/17	8/28/17	Complete Genome	SC	SAMEA4475701	GCA_900187195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/195/GCA_900187195.1_51485_F01	-	NCTC11007
Streptococcus agalactiae	1311	PRJNA258307	258307	Terrabacteria group	Firmicutes	2.06435	35.7	chromosome:NZ_CP011327.1/CP011327.1	-	1	2101	1963	8/3/15	3/17/17	Chromosome	GUANGXI ACADEMY OF FISHERY SCIENCES	SAMN02991566	GCA_001190845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/190/845/GCA_001190845.1_ASM119084v1	-	GX064
Streptococcus suis 2524	1214181	PRJNA171419	171419	Terrabacteria group	Firmicutes	1.88224	41.5	-	ALKZ01	62	1851	1719	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469521	GCA_000440415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/415/GCA_000440415.1_version1	-	2524
Pseudomonas syringae pv. theae	103985	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	6.23275	58.7	-	LJRU01	369	5858	5466	10/20/15	3/27/17	Scaffold	University of Toronto	SAMN04033035	GCA_001401255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/255/GCA_001401255.1_PthICMP3923	-	ICMP3923
Vibrio vulnificus	672	PRJNA299126	299126	Proteobacteria	Gammaproteobacteria	4.94744	46.7	-	LMXX01	132	4742	4463	12/7/16	4/6/17	Contig	Exeter University	SAMN04193762	GCA_001890485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/485/GCA_001890485.1_ASM189048v1	-	99-796
Bacillus licheniformis	1402	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.29649	45.8	-	NPMO01	146	4310	4139	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372679	GCA_002272155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/155/GCA_002272155.1_assembly-7510_v1	-	7510
Chryseobacterium indologenes	253	PRJNA231221	231221	FCB group	Bacteroidetes/Chlorobi group	5.11927	37.2	chromosome:NZ_CP022058.1/CP022058.1	-	1	4615	4402	6/27/17	6/29/17	Complete Genome	US Food and Drug Administration 	SAMN06173350	GCA_002208925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/925/GCA_002208925.1_ASM220892v1	-	FDAARGOS_337
Shigella sonnei	624	PRJEB2075	203826	Proteobacteria	Gammaproteobacteria	4.94816	50.4	-	CXML01	459	5613	4780	7/16/15	2/24/17	Contig	SC	SAMEA1560371	GCA_001255335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/335/GCA_001255335.1_8489_2_94	-	36971985
Bacteroides fragilis str. S23 R14	1339291	PRJNA206122	206122	FCB group	Bacteroidetes/Chlorobi group	5.26174	43.1	-	JGDX01	263	4838	4446	3/20/14	4/18/17	Contig	IGS	SAMN02314430	GCA_000598665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/665/GCA_000598665.1_ASM59866v1	-	S23 R14
Lactobacillus reuteri	1598	PRJNA328437	328437	Terrabacteria group	Firmicutes	2.2407	38.3	-	MBLQ01	154	2260	2027	8/11/16	4/10/17	Scaffold	Sheba Medical Center	SAMN05371093	GCA_001703855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/703/855/GCA_001703855.1_ASM170385v1	-	480_44
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.90246	67.1	-	MUQC01	121	7557	7088	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001810	GCA_001991175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/175/GCA_001991175.1_ASM199117v1	-	VC6905
Histophilus somni	731	PRJNA281531	281531	Proteobacteria	Gammaproteobacteria	2.11064	37.2	chromosome:NZ_CP018802.1/CP018802.1	-	1	1923	1796	5/31/17	6/2/17	Complete Genome	USDA-ARS-USMARC	SAMN06141919	GCA_002162175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/175/GCA_002162175.1_ASM216217v1	-	USDA-ARS-USMARC-63250
Histophilus somni	731	PRJNA281531	281531	Proteobacteria	Gammaproteobacteria	2.11061	37.2	chromosome:NZ_CP018807.1/CP018807.1	-	1	1924	1801	5/31/17	6/2/17	Complete Genome	USDA-ARS-USMARC	SAMN06141923	GCA_002162275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/275/GCA_002162275.1_ASM216227v1	-	USDA-ARS-USMARC-63373
Burkholderia mallei PRL-20	436115	PRJNA19147	19147	Proteobacteria	Betaproteobacteria	5.66975	68.4	-	AAZP01	274	6049	5491	4/24/07	5/18/17	Contig	TIGR	SAMN02435865	GCA_000169875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/875/GCA_000169875.1_ASM16987v1	-	PRL-20
Bacillus thuringiensis Bt407	527021	PRJNA29717	29717	Terrabacteria group	Firmicutes	6.02684	34.8	chromosome:NZ_CM000747.1/CM000747.1	ACMZ01	1	13089	12592	4/30/09	6/15/17	Chromosome	Naval Medical Research Center	SAMN00727629	GCA_000161495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/495/GCA_000161495.1_ASM16149v1	22645259	Bt407
Ralstonia solanacearum SD54	1333539	PRJNA202849	202849	Proteobacteria	Betaproteobacteria	5.64732	67	-	ASQR02	165	5095	4763	7/17/13	4/2/17	Contig	"Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences"	SAMN02470050	GCA_000430925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/925/GCA_000430925.2_RsSD54V2.0	24356823	SD54
Vibrio cholerae MZO-2	417398	PRJNA18495	18495	Proteobacteria	Gammaproteobacteria	3.97725	47.6	-	AAWF02	36	3809	3563	1/3/07	3/26/17	Scaffold	TIGR	SAMN02435870	GCA_000153985.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/985/GCA_000153985.3_ASM15398v3	-	MZO-2
Clostridioides difficile T15	1215067	PRJEB197	222740	Terrabacteria group	Firmicutes	4.35047	28.3	-	CAMK01	631	4134	3927	10/14/13	3/16/17	Scaffold	LPBA	SAMEA3138909	GCA_000531505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/505/GCA_000531505.1_T15	24482682	T15
Shigella boydii	621	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.8719	50.7	-	NISW01	147	5108	4693	6/22/17	6/26/17	Contig	JCVI	SAMN07203017	GCA_002205865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/865/GCA_002205865.1_ASM220586v1	-	ESBL-A16-4-1
Francisella tularensis subsp. novicida FTE	545422	PRJNA30119	30119	Proteobacteria	Gammaproteobacteria	1.88887	32.4	-	ABSS01	4	1822	1729	7/18/08	3/30/17	Scaffold	BioHealthBase	SAMN02469397	GCA_000155755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/755/GCA_000155755.1_FTE_ASSEMBLY	-	FTE
Brucella abortus bv. 1 str. NI474	1051056	PRJNA74323	74323	Proteobacteria	Alphaproteobacteria	3.30303	57.2	-	AGVG01	3	3392	3150	2/3/12	3/23/17	Scaffold	Broad Institute	SAMN02596740	GCA_000245875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/875/GCA_000245875.1_Bruc_abor_bv1_NI474_V1	-	NI474
Yersinia pseudotuberculosis	633	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.92182	47.4	-	CIKF01	91	4599	4278	4/21/15	4/4/17	Scaffold	SC	SAMEA859899	GCA_001319705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/705/GCA_001319705.1_5139_3_5	-	IP32881
Lactobacillus delbrueckii subsp. bulgaricus	1585	PRJNA271062	271062	Terrabacteria group	Firmicutes	2.06078	49.1	-	JXRV01	536	2086	1361	2/26/15	7/23/15	Contig	CERELA-CONICET	SAMN03272671	GCA_000934805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/805/GCA_000934805.1_ASM93480v1	26112792	CRL871
Xanthomonas citri subsp. citri	611301	PRJEB7164	306121	Proteobacteria	Gammaproteobacteria	5.37058	64.5358	chromosome XACJK:LN590509.1; plasmid XACJK2_p1:LN590510.1; plasmid XACJK2_p2:LN590511.1	CCWV01	96	9738	9344	12/16/15	12/16/15	Chromosome	Genoscope CEA	SAMEA2755371	GCA_001496995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/995/GCA_001496995.1_ASX_PRJEB7164_v1	-	-
Campylobacter fetus subsp. venerealis	32020	PRJNA285152	285152	Proteobacteria	delta/epsilon subdivisions	1.94607	33.2	-	LREX01	98	2012	1861	8/5/16	4/5/17	Contig	Utrecht University	SAMN04419579	GCA_001699655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/655/GCA_001699655.1_ASM169965v1	27333878	ADRI1362
Xanthomonas oryzae pv. oryzae	64187	PRJNA269399	269399	Proteobacteria	Gammaproteobacteria	4.29545	63.9	-	JXDV01	455	4295	3433	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252498	GCA_001927505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/505/GCA_001927505.1_ASM192750v1	-	BXO432
Oenococcus oeni IOEB_S436a	1428432	PRJNA229566	229566	Terrabacteria group	Firmicutes	1.76418	37.8	-	AZLS01	44	1808	1648	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02904301	GCA_000762025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/025/GCA_000762025.1_Oeoe_IOEB_S436a_1.0	24901216	IOEB_S436a
Streptococcus mitis	28037	PRJNA302716	302716	Terrabacteria group	Firmicutes	1.84788	40.4	-	MUYN01	14	1832	1718	3/3/17	3/6/17	Scaffold	TAILORED-Treatment project	SAMN06286552	GCA_002014755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/755/GCA_002014755.1_ASM201475v1	-	CCUG 31611
Vibrio parahaemolyticus	670	PRJNA267226	267226	Proteobacteria	Gammaproteobacteria	5.11244	45.2	-	JTGR01	202	4939	4743	11/25/14	3/16/17	Scaffold	Bureau of Food Surveillance and Science Integration	SAMN03195667	GCA_000786845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/845/GCA_000786845.1_T9109	25635013	T9109
Cuniculiplasma divulgatum	1673428	PRJEB12275	309794	Euryarchaeota	Thermoplasmata	1.87892	37.2	chromosome I:NZ_LT719092.1/LT719092.1	-	1	1862	1802	1/31/17	4/17/17	Complete Genome	Immanuel Kant Baltic Federal University	SAMEA3719624	GCA_900090055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/090/055/GCA_900090055.1_C.divulgatum_PM4	-	PM4 (=JCM 30641; =VKM B-2940)
Lactobacillus casei	1582	PRJNA353570	353570	Terrabacteria group	Firmicutes	2.74492	46.4	-	MPOP01	193	2894	2564	11/22/16	4/6/17	Scaffold	University of Copenhagen	SAMN06036023	GCA_001885295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/295/GCA_001885295.1_ASM188529v1	-	Z11
Salinispora arenicola	168697	PRJNA239501	239501	Terrabacteria group	Actinobacteria	5.85785	69.5	-	JNLS01	151	5418	4904	6/11/14	4/2/17	Scaffold	DOE Joint Genome Institute	SAMN02841215	GCA_000702345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/345/GCA_000702345.1_ASM70234v1	-	CNH996
Enterococcus faecalis	1351	PRJNA317592	317592	Terrabacteria group	Firmicutes	3.02601	37.2	chromosome:NZ_CP015410.2/CP015410.2	-	1	3014	2815	7/20/16	4/17/17	Complete Genome	University of Bern	SAMN04621616	GCA_001689055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/055/GCA_001689055.2_ASM168905v2	-	KB1
Clostridium botulinum	1491	PRJNA290143	290143	Terrabacteria group	Firmicutes	2.89403	28	-	LHYW01	83	2770	2574	8/12/15	3/26/17	Scaffold	Anses	SAMN03876606	GCA_001267015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/015/GCA_001267015.1_ASM126701v1	26430029	LNC5-DC
Borrelia burgdorferi IPT112	1408878	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.03557	28.3	-	AYCB01	648	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378845	GCA_000502095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/095/GCA_000502095.1_BorBurgIPT112	-	IPT112
Treponema pallidum subsp. pallidum	161	PRJNA322283	322283	Spirochaetes	Spirochaetia	1.13916	52.8	chromosome:NZ_CP016046.1/CP016046.1	-	1	1065	1003	10/13/16	4/5/17	Chromosome	"National Institute of Health, Portugal"	SAMN05150273	GCA_001761515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/515/GCA_001761515.1_ASM176151v1	-	PT_SIF0751
Brucella suis 63/252	1160232	PRJNA173607	173607	Proteobacteria	Alphaproteobacteria	3.30824	57.2	-	AQNT01	8	3350	3152	4/16/13	4/1/17	Contig	Broad Institute	SAMN00811231	GCA_000366085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/085/GCA_000366085.1_Bruc_suis_63_252_V1	-	63/252
Enterococcus faecalis TX0012	749496	PRJNA47145	47145	Terrabacteria group	Firmicutes	2.81853	37.4	-	AECD01	36	2802	2682	9/9/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189103	GCA_000148245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/245/GCA_000148245.1_ASM14824v1	-	TX0012
Streptococcus mutans TCI-220	1074161	PRJNA72065	72065	Terrabacteria group	Firmicutes	1.79064	37	-	AGLP01	145	1800	1694	10/6/11	3/22/17	Contig	JCVI	SAMN02436453	GCA_000229485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/485/GCA_000229485.2_SMUT6-NEX_10-220	-	TCI-220
Neisseria gonorrhoeae SK7842	1352527	PRJNA209333	209333	Proteobacteria	Betaproteobacteria	2.06337	52.7	-	ATPI01	442	2467	2073	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02338786	GCA_001025765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/765/GCA_001025765.1_ASM102576v1	-	SK7842
Enterococcus faecium Com15	565663	PRJNA32967	32967	Terrabacteria group	Firmicutes	2.80186	38.3	-	ACBD01	20	2831	2606	5/20/09	3/22/17	Scaffold	Broad Institute	SAMN02595274	GCA_000157655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/655/GCA_000157655.1_ASM15765v1	-	Com15
Chlamydia psittaci	83554	PRJNA312238	312238	PVC group	Chlamydiae	1.17659	38.9598	plasmid unnamed:NZ_CM004617.1/CM004617.1	LZRX01	12	1050	998	8/26/16	4/5/17	Contig	University of the Sunshine Coast	SAMN04496221	GCA_001714575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/575/GCA_001714575.1_ASM171457v1	-	CR009
Bacillus amyloliquefaciens	1390	PRJNA304213	304213	Terrabacteria group	Firmicutes	4.02366	46.4	-	LPUP01	14	3984	3758	2/11/16	4/4/17	Scaffold	Chinese Academy of Sciences	SAMN04296795	GCA_001558705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/705/GCA_001558705.1_ASM155870v1	-	11B91
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.81445	66.2	-	JUMH01	259	4400	4289	7/10/15	3/26/17	Contig	University of Washington	SAMN03198171	GCA_001075475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/475/GCA_001075475.1_ASM107547v1	26230489	951_SMAL
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12654	41.2	-	CWEK01	74	2054	1876	6/23/15	3/26/17	Contig	SC	SAMEA1032794	GCA_001175685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/685/GCA_001175685.1_6903_8_55	-	EQUI0200
Pasteurella multocida subsp. septica	115545	PRJNA320086	320086	Proteobacteria	Gammaproteobacteria	2.2136	40.3	-	LYOX01	46	2067	1986	6/10/16	4/5/17	Contig	Huazhong Agricultural University	SAMN04918751	GCA_001661585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/661/585/GCA_001661585.1_ASM166158v1	-	HB02
Lactobacillus rhamnosus	47715	PRJNA287246	287246	Terrabacteria group	Firmicutes	3.12747	46.6	-	LFNA01	81	3176	2833	7/1/15	4/10/17	Contig	Vavilov Institute of General Genetics	SAMN03766173	GCA_001044405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/405/GCA_001044405.1_ASM104440v1	-	40f
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31472	57.1716	chromosome 1:NZ_CP018556.1/CP018556.1; chromosome 2:NZ_CP018557.1/CP018557.1	-	2	3375	3147	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932971	GCA_002191735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/735/GCA_002191735.1_ASM219173v1	28388689	BwIM_TUR_40
Streptococcus troglodytae	1111760	PRJDB2913	274627	Terrabacteria group	Firmicutes	2.09787	37.2	chromosome:AP014612.1	-	1	2162	2082	2/4/15	2/14/17	Complete Genome	"Tsurumi University, School of Dental Medicine"	SAMD00017730	GCA_002355215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/215/GCA_002355215.1_ASM235521v1	-	TKU 31
Bordetella bronchiseptica MBORD632	1331222	PRJNA202134	202134	Proteobacteria	Betaproteobacteria	5.14864	68.2	-	JGXJ01	164	4945	4737	5/12/14	4/2/17	Contig	JCVI	SAMN02231443	GCA_000690275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/275/GCA_000690275.1_gbb26v01	25908122	MBORD632
Sinorhizobium meliloti	382	PRJEB16786	350918	Proteobacteria	Alphaproteobacteria	6.91961	62	-	FNYP01	184	7123	6421	10/29/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04244575	GCA_900108935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/935/GCA_900108935.1_IMG-taxon_2597490345_annotated_assembly	-	AK83
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.44943	53.5	-	MKYH01	37	2407	2186	12/6/16	8/3/17	Contig	Institute for Medical Research	SAMN05877641	GCA_001889765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/765/GCA_001889765.1_ASM188976v1	28254972	rz379
Listeria ivanovii subsp. ivanovii	202751	PRJNA257573	257573	Terrabacteria group	Firmicutes	2.91955	37.2	chromosome:NZ_CP009577.1/CP009577.1	-	1	2898	2728	10/6/14	2/26/17	Complete Genome	ETH Zurich	SAMN02953497	GCA_000763515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/515/GCA_000763515.1_ASM76351v1	25614561	WSLC 3010
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.43896	46.9	-	CWIV01	107	4131	3908	7/6/15	3/26/17	Contig	SC	SAMEA980203	GCA_001182225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/225/GCA_001182225.1_5116_3_3	-	H7580/93
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.07528	41.5	-	JJPY01	128	3504	3314	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708955	GCA_000979815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/815/GCA_000979815.1_gtlEnvA5udCFS	25756680	3.H.T.1A.1
Leuconostoc mesenteroides subsp. cremoris T26	1339224	PRJNA205545	205545	Terrabacteria group	Firmicutes	1.83247	38.4	-	JAUJ01	123	1931	1621	5/8/14	4/2/17	Scaffold	Copenhagen University	SAMN02767914	GCA_000686485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/485/GCA_000686485.1_Leuconostoc	24903867	T26
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.22201	40	-	FPML01	125	1089	982	5/10/17	5/24/17	Scaffold	WTSI	SAMEA1094363	GCA_900118945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/945/GCA_900118945.1_7067_6_78	-	86_33
Serratia marcescens	615	PRJNA395801	395801	Proteobacteria	Gammaproteobacteria	5.68777	58.6	-	NPIX01	272	5525	5193	8/14/17	8/16/17	Scaffold	"Austrian Agency for Health and Food Safety, Vienna, Austria"	SAMN07414881	GCA_002250685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/685/GCA_002250685.1_ASM225068v1	-	at10508
Lactobacillus plantarum UCMA 3037	1284223	PRJNA186734	186734	Terrabacteria group	Firmicutes	3.10828	44.5	-	APHP01	68	3019	2836	3/19/13	3/23/17	Scaffold	Universite de Caen Basse-Normandie	SAMN02471400	GCA_000347515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/515/GCA_000347515.1_Assemblage_de_novo	23704179	UCMA 3037
Mannheimia haemolytica	75985	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.65947	41	-	LQEV01	99	2755	2583	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366543	GCA_001929885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/885/GCA_001929885.1_ASM192988v1	-	2700MH
Campylobacter coli 1417	887293	PRJNA52723	52723	Proteobacteria	delta/epsilon subdivisions	1.73136	31.3	-	AIMY01	97	1834	1717	3/16/12	3/15/17	Contig	Cornell University	SAMN02429057	GCA_000253735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/735/GCA_000253735.2_ASM25373v2	-	1417
Burkholderia sp. E168m22	1561199	PRJDB2729	297658	Proteobacteria	Betaproteobacteria	7.61392	66.8	-	BBSK01	186	7199	6820	10/1/15	4/11/17	Contig	"Laboratory of Microbial Genetics, Department of Environmental Life Sciences, Graduate School of Life Sciences, Tohoku University"	SAMD00020904	GCA_001319805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/805/GCA_001319805.1_ASM131980v1	-	E168m22
Propionibacterium acnes HL063PA1	765113	PRJNA49261	49261	Terrabacteria group	Actinobacteria	2.47671	60	-	ADYK01	14	2497	2372	7/30/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189231	GCA_000144545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/545/GCA_000144545.1_ASM14454v1	-	HL063PA1
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.49668	32.8	-	CUFI01	63	2483	2350	3/31/15	3/26/17	Contig	SC	SAMEA1035133	GCA_001231145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/145/GCA_001231145.1_7068_7_14	-	F06
Proteus mirabilis	584	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.95664	38.7	-	JWCS01	166	3638	3520	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197068	GCA_001060285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/285/GCA_001060285.1_ASM106028v1	26230489	1114_PMIR
Enterobacter cloacae JD6301	1399774	PRJNA218809	218809	Proteobacteria	Gammaproteobacteria	4.77291	53.4	-	JDWH01	49	4693	4433	5/8/14	3/24/17	Scaffold	DOE Joint Genome Institute	SAMN02952978	GCA_000686185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/185/GCA_000686185.1_ASM68618v1	24874669	JD6301
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.05353	55.6	-	FKZP01	95	5969	5618	5/19/16	2/25/17	Scaffold	SC	SAMEA2273590	GCA_900083595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/595/GCA_900083595.1_12045_6_57	-	2880STDY5682505
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.44878	56.8	-	MSAI01	119	4381	4123	12/28/16	4/6/17	Contig	FDA/CFSAN	SAMN06100259	GCA_001922945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/945/GCA_001922945.1_ASM192294v1	-	MOD1-Md33g
Lactobacillus salivarius	1624	PRJNA357984	357984	Terrabacteria group	Firmicutes	1.8582	32.8	-	NBDZ01	62	1837	1695	4/5/17	4/8/17	Scaffold	University College Cork	SAMN06163274	GCA_002079365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/365/GCA_002079365.1_ASM207936v1	-	NCIMB8816
Moraxella catarrhalis	480	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.85106	41.7	-	JVAC01	42	1712	1591	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197812	GCA_001065625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/625/GCA_001065625.1_ASM106562v1	26230489	611_MCAT
Mycobacterium abscessus 6G-0212	1001739	PRJNA65209	65209	Terrabacteria group	Actinobacteria	5.14469	64.1	-	AKUR01	13	5176	5088	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00672657	GCA_000270645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/645/GCA_000270645.1_ASM27064v1	-	6G-0212
Bifidobacterium breve	1685	PRJEB18553	373869	Terrabacteria group	Actinobacteria	2.37804	58.5	-	FTRL01	41	2120	1934	2/8/17	4/6/17	Contig	University of Tromso	SAMEA51822418	GCA_900157105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/105/GCA_900157105.1_Bifido_10_v1	-	-
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.17887	36.7	-	LPSN01	8	2302	2166	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305175	GCA_001560685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/685/GCA_001560685.1_NG05B_CO5_08	-	NG05B_CO5_08
Vibrio sp. V12_P9A6T4	1938667	PRJNA361511	361511	Proteobacteria	Gammaproteobacteria	3.83808	44.7	-	NDIH01	126	3593	3390	8/4/17	8/6/17	Contig	Instituto de ecologia	SAMN06251408	GCA_002241275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/275/GCA_002241275.1_ASM224127v1	-	V12_P9A6T4
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.33434	63	-	DBED01	41	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453151	GCA_002293905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/905/GCA_002293905.1_ASM229390v1	28894102	-
Aeromonas hydrophila	644	PRJNA326908	326908	Proteobacteria	Gammaproteobacteria	4.96091	61.1	-	MAKJ01	162	4671	4433	10/11/16	4/5/17	Contig	University of Malaya	SAMN05294043	GCA_001756345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/345/GCA_001756345.1_ASM175634v1	-	M053
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.677	67.1	-	LOVL01	106	6957	6524	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449201	GCA_001525705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/705/GCA_001525705.1_ASM152570v1	-	MSMB1200
Flavobacterium psychrophilum	96345	PRJEB21067	396411	FCB group	Bacteroidetes/Chlorobi group	2.73521	32.3	-	FYCT01	63	2485	2404	7/29/17	8/7/17	Contig	INRA	SAMEA104125747	GCA_900186565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/565/GCA_900186565.1_FPFI1661_V1	-	FI166
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.76076	47.6	-	MEAG01	84	3489	3301	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320408	GCA_001883425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/425/GCA_001883425.1_ASM188342v1	-	01/0298
Pectobacterium carotovorum	554	PRJNA381621	381621	Proteobacteria	Gammaproteobacteria	4.79732	52.2	-	NCQM01	191	4373	4187	8/14/17	8/16/17	Scaffold	Biotechnology Institute of UNAM	SAMN06684311	GCA_002250215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/215/GCA_002250215.1_101_V1	-	BF20
Lactobacillus crispatus	47770	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.04877	36.8	-	LYRN01	68	2095	1897	7/14/17	7/17/17	Scaffold	University of Minnesota	SAMN04498996	GCA_002219015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/219/015/GCA_002219015.1_ASM221901v1	-	UMNLC24
Gardnerella vaginalis	2702	PRJNA231221	231221	Terrabacteria group	Actinobacteria	1.77085	41.3	-	NJFH01	2	1493	1318	6/23/17	6/23/17	Contig	US Food and Drug Administration 	SAMN06173309	GCA_002206225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/225/GCA_002206225.1_ASM220622v1	-	FDAARGOS_296
Lactobacillus paracasei	1597	PRJNA328904	328904	Terrabacteria group	Firmicutes	3.15771	46.2	-	MBTZ01	138	3308	3063	11/1/16	4/5/17	Contig	University of Malaya	SAMN05383978	GCA_001858275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/275/GCA_001858275.1_ASM185827v1	-	L9D
Streptococcus oralis subsp. oralis	1891914	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.96707	41.3	-	NCUO01	12	1913	1812	4/18/17	4/21/17	Contig	Slagelse Hospital	SAMN06705620	GCA_002096495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/495/GCA_002096495.1_ASM209649v1	27325438	OD_336064_07
Acinetobacter nosocomialis	106654	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.74824	38.7	-	DDAW01	41	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456965	GCA_002332705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/705/GCA_002332705.1_ASM233270v1	28894102	-
Klebsiella variicola	244366	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.61595	57.3	-	JURH01	132	5542	5303	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03198041	GCA_001067475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/475/GCA_001067475.1_ASM106747v1	26230489	834_KPNE
Pseudoalteromonas sp. EB27	1938368	PRJNA362334	362334	Proteobacteria	Gammaproteobacteria	4.52604	39	-	MTQD01	37	4089	3918	1/30/17	4/17/17	Contig	BluePharmTrain	SAMN06238077	GCA_001974875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/974/875/GCA_001974875.1_ASM197487v1	-	EB27
Lysinibacillus varians	1145276	PRJNA223427	223427	Terrabacteria group	Firmicutes	4.66282	37.2	chromosome:NZ_CP006837.1/CP006837.1	-	1	4576	4378	3/25/14	4/9/17	Complete Genome	Guangdong Institute of Microbiology	SAMN03081497	GCA_000600105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/105/GCA_000600105.1_ASM60010v1	25070216	GY32
Enterobacter asburiae	61645	PRJNA297498	297498	Proteobacteria	Gammaproteobacteria	4.94724	55.4	-	LLJQ01	108	4869	4636	12/24/15	4/5/17	Scaffold	Statens Serum Institut	SAMN04124437	GCA_001482565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/565/GCA_001482565.1_ASM148256v1	-	AMA 810
Pseudomonas amygdali pv. myricae	129139	PRJNA287068	287068	Proteobacteria	Gammaproteobacteria	6.02584	58	-	LGLA01	62	5541	5116	9/18/15	4/4/17	Scaffold	University of Toronto	SAMN03837769	GCA_001293985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/985/GCA_001293985.1_PmyAZ84488	-	AZ84488
Acinetobacter pittii	48296	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.10022	38.7	-	LLCL01	61	4098	3841	11/5/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145616	GCA_001432715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/715/GCA_001432715.1_ASM143271v1	-	ABBL005
Citrobacter freundii	546	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	6.18597	51.8	-	LJEB01	850	6586	5961	10/15/15	4/4/17	Contig	University of KwaZulu Natal	SAMN04011435	GCA_001316675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/675/GCA_001316675.1_ASM131667v1	-	ST62:944112508
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.03885	55.2	-	LAAF01	88	5029	4778	3/19/15	3/25/17	Contig	JCVI	SAMN03283621	GCA_000956885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/885/GCA_000956885.1_ASM95688v1	-	34996
Kingella kingae ATCC 23330	887327	PRJEB17081	351712	Proteobacteria	Betaproteobacteria	1.95389	46.6	-	FOJK01	59	2080	1893	10/31/16	4/5/17	Contig	URMITE	SAMEA4526462	GCA_900111845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/845/GCA_900111845.1_PRJEB17081	-	ATCC 23330
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.05012	55	-	LDBH01	48	5011	4780	5/21/15	4/6/17	Contig	JCVI	SAMN03495944	GCA_001011295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/295/GCA_001011295.1_ASM101129v1	-	GN02384
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.06589	64.1	-	FSFN01	21	5094	4900	12/14/16	3/21/17	Contig	SC	SAMEA2071558	GCA_900134915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/915/GCA_900134915.1_10208_3_32	-	457
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.7354	66.5	-	LOUQ01	131	8120	7668	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449178	GCA_001525785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/785/GCA_001525785.1_ASM152578v1	-	INT3-BP169
Streptococcus sobrinus TCI-215	1074158	PRJNA72059	72059	Terrabacteria group	Firmicutes	2.12896	43.5	-	AGHU01	306	2140	1902	10/6/11	3/30/17	Contig	JCVI	SAMN02436530	GCA_000228685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/685/GCA_000228685.2_SMUT6-NEX_7-215	-	TCI-215
Leclercia adecarboxylata	83655	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.56732	55.7	-	DGLZ01	52	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451048	GCA_002388185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/185/GCA_002388185.1_ASM238818v1	28894102	-
Elizabethkingia anophelis	1117645	PRJEB14302	358788	FCB group	Bacteroidetes/Chlorobi group	3.84734	35.7	-	FTQZ01	65	3476	3390	1/20/17	5/31/17	Scaffold	INSTITUT PASTEUR	SAMEA50774668	GCA_900156995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/995/GCA_900156995.1_ASM90015699v1	-	-
Pseudomonas sp. URIL14HWK12:I6	1283293	PRJNA186475	186475	Proteobacteria	Gammaproteobacteria	6.33775	60	-	AZVL01	61	5767	5597	1/3/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02597216	GCA_000514195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/195/GCA_000514195.1_ASM51419v1	-	URIL14HWK12:I6
Streptomyces sp. MspMP-M5	1155718	PRJNA169745	169745	Terrabacteria group	Actinobacteria	8.59666	71.9	-	AREE01	120	7659	7133	4/19/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02440431	GCA_000373585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/585/GCA_000373585.1_ASM37358v1	-	MspMP-M5
Paeniclostridium sordellii ATCC 9714	1292036	PRJNA188695	188695	Terrabacteria group	Firmicutes	3.55292	27.4	-	APWR01	103	6001	5957	8/5/13	1/8/14	Contig	Kansas State University	SAMN02470117	GCA_000444075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/075/GCA_000444075.1_ASM44407v1	23873908	ATCC 9714
Acinetobacter sp. CIP 102143	1144666	PRJNA183222	183222	Proteobacteria	Gammaproteobacteria	3.02507	41.6	-	APSE01	26	3004	2705	4/17/13	4/10/17	Scaffold	Broad Institute	SAMN01828127	GCA_000369865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/865/GCA_000369865.1_Acin_sp_CIP_102143_V1	-	CIP 102143
Flavobacterium sp. BFFFF2	2015558	PRJNA340070	340070	FCB group	Bacteroidetes/Chlorobi group	3.71878	40	-	NKJD01	118	3123	3050	8/16/17	8/16/17	Contig	CNRS-AMU	SAMN07280664	GCA_002256385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/385/GCA_002256385.1_ASM225638v1	-	-
Klebsiella sp. NFIX17	1566176	PRJEB17330	351501	Proteobacteria	Gammaproteobacteria	5.28222	58.1	-	FOPL01	24	5217	4970	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159410	GCA_900113475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/475/GCA_900113475.1_IMG-taxon_2600255290_annotated_assembly	-	NFIX17
Bacillus sp. EB01	1347086	PRJEB4215	222451	Terrabacteria group	Firmicutes	5.28226	42.2	-	CCBA01	1	5065	4888	3/20/14	4/9/17	Scaffold	URMITE	SAMEA3138993	GCA_000613125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/125/GCA_000613125.1_EB01T	-	EB01
Clostridium sp. CL-6	1499683	PRJEB6474	251848	Terrabacteria group	Firmicutes	4.32518	32.2	-	CCFF01	17	4114	3907	9/6/14	4/9/17	Contig	URMITE	SAMEA2602735	GCA_000751675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/675/GCA_000751675.1_Clostridium_culturomicsense	-	-
Sphingomonas sp. Ant H11	1564113	PRJNA264598	264598	Proteobacteria	Alphaproteobacteria	4.64369	64.3	-	JSBN01	214	4552	3320	12/5/14	4/9/17	Contig	Centre of Microbial Ecology and Genomics	SAMN03140074	GCA_000797515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/515/GCA_000797515.1_ASM79751v1	-	Ant H11
Synechococcus sp. MIT S9508	1801629	PRJNA311928	311928	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.50243	56	-	LVHU01	23	2735	2642	4/25/16	4/12/17	Scaffold	MIT	SAMN04490775	GCA_001632165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/165/GCA_001632165.1_ASM163216v1	-	MIT S9508
Rhodococcus sp. M8	1925550	PRJNA347902	347902	Terrabacteria group	Actinobacteria	6.31759	70.3	-	MLYX02	13	5746	5561	12/7/16	4/17/17	Contig	Research Institute for Genetics and Selection of Industrial Microorganisms(Genetika)	SAMN05905582	GCA_001890475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/475/GCA_001890475.2_ASM189047v2	-	M8
Enterobacter sp. MGH119	1686391	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.63186	55.4	-	LETG01	11	4552	4338	6/19/15	4/10/17	Scaffold	Broad Institute	SAMN03280183	GCA_001037675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/675/GCA_001037675.1_Ente_cloa_complex_MGH119_V1	-	MGH119
Staphylococcus sp. HMSC034D07	1739307	PRJNA299957	299957	Terrabacteria group	Firmicutes	2.3947	32.2	-	LTGA01	87	2390	2272	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477618	GCA_001811475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/475/GCA_001811475.1_ASM181147v1	-	HMSC034D07
Corynebacterium sp. HMSC055G02	1715027	PRJNA296154	296154	Terrabacteria group	Actinobacteria	2.41067	58.9	-	LTKK01	45	2101	2024	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04495802	GCA_001809065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/065/GCA_001809065.1_ASM180906v1	-	HMSC055G02
Arthrobacter sp. TB 23	494419	PRJNA170988	170988	Terrabacteria group	Actinobacteria	3.54231	63.3	-	ALPM01	126	3359	3089	9/5/12	4/17/17	Contig	Università degli Studi di Firenze	SAMN02471747	GCA_000294595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/595/GCA_000294595.1_ASM29459v1	23105071	TB 23
Bradyrhizobium sp. NAS96.2	1680160	PRJNA289232	289232	Proteobacteria	Alphaproteobacteria	8.92749	63.8	-	LGHK01	450	8300	7677	12/19/16	4/16/17	Contig	UFRGS	SAMN03846991	GCA_001908235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/235/GCA_001908235.1_ASM190823v1	-	NAS96.2
Streptococcus sp. HMSC076H08	1739281	PRJNA299931	299931	Terrabacteria group	Firmicutes	1.95442	35.2	-	LTGV01	30	1966	1884	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477594	GCA_001811035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/035/GCA_001811035.1_ASM181103v1	-	HMSC076H08
Mycobacterium sp. H072	1720568	PRJNA294421	294421	Terrabacteria group	Actinobacteria	5.44938	64	-	LJYK01	54	5379	5214	11/6/15	4/11/17	Contig	US EPA	SAMN04091134	GCA_001440105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/105/GCA_001440105.1_ASM144010v1	26798093	H072
Prevotella sp. 885	2022527	PRJNA395537	395537	FCB group	Bacteroidetes/Chlorobi group	3.7214	48.7	-	1-Nov	133	3074	2845	8/22/17	8/24/17	Contig	Pirogov Russian National Research Medical University	SAMN07409541	GCA_002265625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/625/GCA_002265625.1_ASM226562v1	-	885
Enterococcus sp. GMD5E	1169669	PRJNA157409	157409	Terrabacteria group	Firmicutes	2.38628	38.1	-	AJRF02	18	2431	2312	10/3/12	4/8/17	Contig	Los Alamos National Laboratory	SAMN02470275	GCA_000302675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/675/GCA_000302675.2_ASM30267v2	23493677	GMD5E
Treponema sp. UBA3870	1947719	PRJNA348753	348753	Spirochaetes	Spirochaetia	2.25637	45.4	-	DGGQ01	219	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452814	GCA_002392275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/275/GCA_002392275.1_ASM239227v1	28894102	-
Methylobacterium sp. Leaf94	1736250	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	5.24796	69.3	-	LMRM01	64	4876	4626	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151630	GCA_001426045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/045/GCA_001426045.1_Leaf94	26633631	Leaf94
Nocardioides sp. REDSEA-S37_B12	1811557	PRJNA289734	289734	Terrabacteria group	Actinobacteria	2.84599	71.4	-	LUPN01	503	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534615	GCA_001627495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/495/GCA_001627495.1_ASM162749v1	27377622	-
Eubacterium sp. UBA4340	1946481	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.74668	46.3	-	DGTI01	117	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454391	GCA_002394285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/285/GCA_002394285.1_ASM239428v1	28894102	-
Paenibacillus sp. FSL H8-457	1227351	PRJNA173827	173827	Terrabacteria group	Firmicutes	7.08377	51.2	-	ASPW01	69	6324	6162	1/13/14	4/9/17	Contig	Cornell University	SAMN02597351	GCA_000517945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/945/GCA_000517945.1_ASM51794v1	24422886	FSL H8-457
Alcanivorax sp. UBA3985	1945984	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.43621	64.8	-	DGCF01	52	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455672	GCA_002384455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/455/GCA_002384455.1_ASM238445v1	28894102	-
Ruminococcus sp. UBA1394	1947404	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.356	42.1	-	DBQM01	60	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452365	GCA_002305725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/725/GCA_002305725.1_ASM230572v1	28894102	-
Thioalkalivibrio sp. ALE18	1158174	PRJNA183048	183048	Proteobacteria	Gammaproteobacteria	2.76724	67.7	-	ARLX01	23	2663	2546	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440485	GCA_000381465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/465/GCA_000381465.1_ASM38146v1	-	ALE18
Bacteroides sp. CAG:661	1262746	PRJEB974	206949	FCB group	Bacteroidetes/Chlorobi group	3.1706	53	-	CBAC01	103	2610	2573	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138514	GCA_000432535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/535/GCA_000432535.1_MGS661	-	-
Prochlorococcus sp. scB241_528J8	1471454	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.57755	31.3	-	JFLE01	166	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671325	GCA_000634095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/095/GCA_000634095.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. BCW_6466	1903583	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.8561	30	-	MJXO01	75	1961	1795	10/4/16	4/13/17	Scaffold	University of California at Davis	SAMN03360175	GCA_001762835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/835/GCA_001762835.1_ASM176283v1	-	BCW_6466
Neisseria sp. HMSC064D07	1715087	PRJNA296215	296215	Proteobacteria	Betaproteobacteria	2.25912	49	-	LTPQ01	71	2216	2069	10/25/16	4/18/17	Scaffold	The Genome Institute at Washington University	SAMN04498601	GCA_001837185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/185/GCA_001837185.1_ASM183718v1	-	HMSC064D07
Rhizobium sp. UR51a	1604021	PRJNA273005	273005	Proteobacteria	Alphaproteobacteria	5.23506	59.2	-	JYFU01	32	5049	4821	2/23/15	4/10/17	Contig	UFRGS	SAMN03288143	GCA_000931365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/365/GCA_000931365.1_ASM93136v1	25838497	UR51a
Chryseobacterium sp. OV279	1500285	PRJEB18184	355430	FCB group	Bacteroidetes/Chlorobi group	5.40318	37.9	-	FQUD01	11	4814	4709	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02787100	GCA_900128945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/945/GCA_900128945.1_IMG-taxon_2588253712_annotated_assembly	-	OV279
Mesorhizobium sp. LSJC265A00	1287322	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.80728	62.4	-	AYVP01	97	6710	6190	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359691	GCA_000502775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/775/GCA_000502775.1_Mloti_LSJC265A00	-	LSJC265A00
Xanthomonas translucens pv. poae	227946	PRJNA326107	326107	Proteobacteria	Gammaproteobacteria	4.61265	68.1	-	MADP01	615	4044	3595	8/18/16	4/5/17	Scaffold	The Connecticut Agricultural Experiment Station	SAMN05258230	GCA_001707335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/335/GCA_001707335.1_XTO_AA	-	Utah5-P1
Microbacterium sp. Leaf179	1736288	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.53381	70.3	-	LMPH01	8	3278	3174	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151668	GCA_001423785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/785/GCA_001423785.1_Leaf179	26633631	Leaf179
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.85589	58.9	-	LNWR01	45	4635	4505	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339855	GCA_001683015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/015/GCA_001683015.1_ASM168301v1	-	G1302
Sphingopyxis sp. SCN 67-31	1660142	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	5.14442	66.5	-	MEFH01	232	4858	4568	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652483	GCA_001725095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/095/GCA_001725095.1_ASM172509v1	26031303	-
Bacillus velezensis	492670	PRJNA270954	270954	Terrabacteria group	Firmicutes	3.99136	46.4	-	JXAM01	60	3876	3726	2/13/15	3/22/17	Contig	Auburn University	SAMN03271888	GCA_000875875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/875/875/GCA_000875875.1_ASM87587v1	25883273	AP183
Gilliamella apicola	1196095	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	3.06968	33.6	-	NAHW01	118	2763	2640	4/13/17	4/18/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603508	GCA_002088895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/895/GCA_002088895.1_ASM208889v1	-	N-9-4
Klebsiella michiganensis	1134687	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.95016	55.6	-	JVGY01	79	5837	5582	7/10/15	2/25/17	Scaffold	University of Washington	SAMN03197634	GCA_001056765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/765/GCA_001056765.1_ASM105676v1	26230489	442_KOXY
Achromobacter sp. 2789STDY5608625	1806481	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	6.872	65.8	-	CYTK01	31	6438	6290	9/19/15	4/11/17	Scaffold	SC	SAMEA2247590	GCA_001299355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/355/GCA_001299355.1_11861_6_19	-	2789STDY5608625
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.40811	50.9	-	MPRF01	64	2356	2252	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016279	GCA_002021035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/035/GCA_002021035.1_ASM202103v1	-	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.06226	58.2	-	JVQN01	309	4992	4698	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197385	GCA_001055795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/795/GCA_001055795.1_ASM105579v1	26230489	193_KOXY
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.78379	32.3	-	FQMT01	12	2777	2614	11/24/16	4/6/17	Contig	SC	SAMEA3449137	GCA_900127035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/035/GCA_900127035.1_17175_3_81	-	3688STDY6125135
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.73662	67.5	-	LPLQ01	111	7028	6651	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449650	GCA_001533645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/645/GCA_001533645.1_ASM153364v1	-	MSMB774WGS
Xanthomonas axonopodis pv. manihotis str. UA686	1185669	PRJNA163733	163733	Proteobacteria	Gammaproteobacteria	4.898	65.1	-	AKET01	143	4330	4024	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090350	GCA_000266425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/425/GCA_000266425.1_UA686	22699502	UA686
Candidatus Microthrix sp. UBA4143	1946185	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.66565	43.2	-	DFWD01	184	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451472	GCA_002380725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/725/GCA_002380725.1_ASM238072v1	28894102	-
Candidatus Microthrix sp. UBA4542	1946188	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.42284	53.9	-	DGLO01	151	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455275	GCA_002388005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/005/GCA_002388005.1_ASM238800v1	28894102	-
Xanthomonas axonopodis pv. manihotis str. UG21	1185706	PRJNA163807	163807	Proteobacteria	Gammaproteobacteria	5.01047	65.1	-	AKEU01	148	4492	4171	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090351	GCA_000266445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/445/GCA_000266445.1_UG21	22699502	UG21
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.77961	67.5	-	LPLT01	86	7067	6701	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449653	GCA_001533705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/705/GCA_001533705.1_ASM153370v1	-	MSMB780WGS
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.75253	32.3	-	FQMU01	13	2735	2558	11/24/16	4/6/17	Contig	SC	SAMEA3449138	GCA_900127045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/045/GCA_900127045.1_17175_3_82	-	3688STDY6125136
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.08348	58	-	JVJE01	116	4989	4772	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197576	GCA_001056525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/525/GCA_001056525.1_ASM105652v1	26230489	385_ECLO
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.60153	50.7	-	MPRM01	81	2551	2460	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016284	GCA_002021105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/105/GCA_002021105.1_ASM202110v1	-	-
Achromobacter sp. 2789STDY5608621	1806496	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	7.26571	67.7	-	CYTU01	118	6747	6473	9/19/15	4/11/17	Scaffold	SC	SAMEA2247586	GCA_001299375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/375/GCA_001299375.1_11861_6_15	-	2789STDY5608621
Klebsiella michiganensis	1134687	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.18483	55.6	-	JWAM01	637	6270	5725	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197126	GCA_001060405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/405/GCA_001060405.1_ASM106040v1	26230489	1169_SBOY
Gilliamella apicola	1196095	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	3.04946	33.7	-	NAHX01	264	2756	2622	4/13/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603509	GCA_002088905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/905/GCA_002088905.1_ASM208890v1	-	N-15-12
Bacillus velezensis	492670	PRJNA248940	248940	Terrabacteria group	Firmicutes	4.1114	46.1	-	JYGH01	30	4106	3922	2/26/15	3/22/17	Contig	"National Academy of Agricultural Science, RDA"	SAMN02808187	GCA_000934885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/885/GCA_000934885.1_ASM93488v1	-	GR4-5
Sphingopyxis sp. RIFCSPHIGHO2_01_FULL_65_24	1802171	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	4.89766	65.7	-	MIAL01	34	4656	4515	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315038	GCA_001829105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/829/105/GCA_001829105.1_ASM182910v1	27774985	-
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	4.8755	58.9	-	LNXQ01	91	4643	4511	7/7/16	4/5/17	Contig	Technical University of Denmark	SAMN03339849	GCA_001683035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/035/GCA_001683035.1_ASM168303v1	-	F3629
Microbacterium sp. Leaf347	1736347	PRJNA297956	297956	Terrabacteria group	Actinobacteria	2.94214	70.4	-	LMPI01	34	2818	2726	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151737	GCA_001423805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/805/GCA_001423805.1_Leaf347	26633631	Leaf347
Xanthomonas translucens pv. poae	227946	PRJNA326107	326107	Proteobacteria	Gammaproteobacteria	4.52076	67.8	-	MADN01	674	4008	3512	8/18/16	4/5/17	Scaffold	The Connecticut Agricultural Experiment Station	SAMN05258173	GCA_001707435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/435/GCA_001707435.1_XTP_AA	-	ATCC 33804
Mesorhizobium sp. LSJC268A00	1287325	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.64179	62.5	-	AYVO01	58	6577	6078	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359692	GCA_000502795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/795/GCA_000502795.1_Mloti_LSJC268A00	-	LSJC268A00
Chryseobacterium sp. YR203	1500291	PRJEB18161	355449	FCB group	Bacteroidetes/Chlorobi group	5.43609	37.1	-	FQVE01	16	5012	4902	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02787073	GCA_900129105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/105/GCA_900129105.1_IMG-taxon_2588254257_annotated_assembly	-	YR203
Rhizobium sp. LMB-1	1605895	PRJNA277782	277782	Proteobacteria	Alphaproteobacteria	5.21875	59.2	-	JZUD01	73	5028	4866	3/20/15	4/10/17	Contig	East China University of Science and Technology	SAMN03396664	GCA_000959075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/959/075/GCA_000959075.1_ASM95907v1	25953182	LMB-1
Neisseria sp. HMSC064F03	1715037	PRJNA296164	296164	Proteobacteria	Betaproteobacteria	2.25487	49.1	-	LTPO01	63	2221	2062	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498574	GCA_001837245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/245/GCA_001837245.1_ASM183724v1	-	HMSC064F03
Campylobacter sp. BCW_6467	1903584	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.70604	30.4	-	MJXP01	52	1769	1620	10/4/16	4/13/17	Scaffold	University of California at Davis	SAMN03360176	GCA_001762855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/855/GCA_001762855.1_ASM176285v1	-	BCW_6467
Prochlorococcus sp. scB241_528O2	1471459	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.53169	31	-	JFLJ01	232	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671330	GCA_000634115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/115/GCA_000634115.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Bacteroides sp. CAG:1060	1262734	PRJEB683	206648	FCB group	Bacteroidetes/Chlorobi group	1.76382	48.5	-	CAWQ01	86	1611	1576	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138520	GCA_000432655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/655/GCA_000432655.1_MGS1060	-	-
Thioalkalivibrio sp. ALgr5	1158162	PRJNA183049	183049	Proteobacteria	Gammaproteobacteria	2.85377	67.1	-	ARLY01	23	2790	2660	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441324	GCA_000381485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/485/GCA_000381485.1_ASM38148v1	-	ALgr5
Ruminococcus sp. UBA1366	1947403	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.77898	48.1	-	DBRO01	133	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06456412	GCA_002306005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/005/GCA_002306005.1_ASM230600v1	28894102	-
Alcanivorax sp. UBA4543	1945992	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.24583	63.9	-	DGLN01	222	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455276	GCA_002387965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/965/GCA_002387965.1_ASM238796v1	28894102	-
Paenibacillus sp. FSL R7-277	1227352	PRJNA173830	173830	Terrabacteria group	Firmicutes	7.59988	52.5	-	ASPX01	122	6511	6290	1/13/14	4/9/17	Contig	Cornell University	SAMN02597352	GCA_000517965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/965/GCA_000517965.1_ASM51796v1	24422886	FSL R7-277
Eubacterium sp. UBA4238	1946480	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.18649	50.3	-	DGXG01	157	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450910	GCA_002396255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/255/GCA_002396255.1_ASM239625v1	28894102	-
Methylobacterium sp. GXS13	1730094	PRJNA297388	297388	Proteobacteria	Alphaproteobacteria	5.80529	68.5	-	LKKO01	112	5515	5203	12/3/15	4/11/17	Contig	Monash University Malaysia	SAMN04123207	GCA_001455965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/965/GCA_001455965.1_Methylo_sp_GXS13_v1	26847900	GXS13
Treponema sp. UBA3862	1947718	PRJNA348753	348753	Spirochaetes	Spirochaetia	1.58569	40.2	-	DGGY01	56	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453641	GCA_002392405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/405/GCA_002392405.1_ASM239240v1	28894102	-
Enterococcus sp. TR	1417988	PRJNA226735	226735	Terrabacteria group	Firmicutes	3.90209	36.6	-	AYPQ01	20	3659	3232	4/18/14	4/10/17	Contig	Gateway Technical College	SAMN02729938	GCA_000633635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/635/GCA_000633635.1_NGEN_DNA_Star_	-	TR
Prevotella sp. khp1	1761884	PRJEB15822	347758	FCB group	Bacteroidetes/Chlorobi group	3.41875	47.7	-	FNJZ01	6	2824	2741	10/20/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487826	GCA_900102205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/205/GCA_900102205.1_IMG-taxon_2606217814_annotated_assembly	-	KHP1
Mycobacterium sp. H054	1720567	PRJNA294421	294421	Terrabacteria group	Actinobacteria	5.42302	64	-	LJYJ01	62	5357	5190	11/6/15	4/11/17	Contig	US EPA	SAMN04091133	GCA_001440125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/125/GCA_001440125.1_ASM144012v1	-	H054
Streptococcus sp. HMSC056C01	1739299	PRJNA299949	299949	Terrabacteria group	Firmicutes	2.07004	39.2	-	LTGH01	44	2040	1915	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477620	GCA_001811305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/305/GCA_001811305.1_ASM181130v1	-	HMSC056C01
Bradyrhizobium sp. UFLA 03-321	1783512	PRJNA354699	354699	Proteobacteria	Alphaproteobacteria	8.59505	63.9	-	MPVQ01	94	7931	7569	1/23/17	4/17/17	Contig	Universidade Federal do Parana (UFPR)	SAMN06050723	GCA_001969825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/825/GCA_001969825.1_ASM196982v1	-	UFLA 03-321
Arthrobacter sp. PAO19	1096756	PRJNA208966	208966	Terrabacteria group	Actinobacteria	3.63739	59.5	-	ATKN01	43	3342	3252	6/26/13	4/8/17	Contig	China Agricultural University	SAMN02469487	GCA_000414345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/345/GCA_000414345.1_contig	23908294	PAO19
Corynebacterium sp. HMSC072G08	1715039	PRJNA296166	296166	Terrabacteria group	Actinobacteria	2.66794	63.5	-	LTKF01	93	2465	2334	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04495790	GCA_001809185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/185/GCA_001809185.1_ASM180918v1	-	HMSC072G08
Staphylococcus sp. HMSC062D04	1739318	PRJNA299968	299968	Terrabacteria group	Firmicutes	2.40975	32	-	LTFP01	136	2396	2165	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477668	GCA_001811685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/685/GCA_001811685.1_ASM181168v1	-	HMSC062D04
Enterobacter sp. MGH120	1686392	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.60762	55.6	-	LETH01	1	4408	4227	6/19/15	4/10/17	Scaffold	Broad Institute	SAMN03280184	GCA_001037725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/725/GCA_001037725.1_Ente_cloa_complex_MGH120_V1	-	MGH120
Rhodococcus sp. CUA-806	1517936	PRJNA344658	344658	Terrabacteria group	Actinobacteria	5.79889	63.9	-	MKKD01	67	5645	3966	1/11/17	4/17/17	Contig	"Scripps Institution of Oceanography, UCSD"	SAMN05830212	GCA_001942265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/265/GCA_001942265.1_ASM194226v1	27902408	CUA-806
Synechococcus sp. 8F6	2025606	PRJNA396543	396543	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.5107	65.8	-	NQKZ01	84	2692	2549	8/15/17	8/17/17	Scaffold	University of Bristol	SAMN07427898	GCA_002252665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/665/GCA_002252665.1_ASM225266v1	-	8F6
Sphingomonas sp. ERG5	1381597	PRJNA266275	266275	Proteobacteria	Alphaproteobacteria	5.73986	63.7	-	JSXI01	86	5329	5176	12/17/14	4/10/17	Contig	"ENVS, Aarhus University"	SAMN03160620	GCA_000803065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/065/GCA_000803065.1_ASM80306v1	25676756	ERG5
Clostridium sp. LF2	1499689	PRJEB6483	251839	Terrabacteria group	Firmicutes	3.75022	30.6	-	CCNN01	15	3517	3308	8/22/14	4/9/17	Contig	URMITE	SAMEA2697684	GCA_000753355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/355/GCA_000753355.1_Clostridium_amazonitimonense	-	-
Bacillus sp. UNC41MFS5	1449046	PRJNA234930	234930	Terrabacteria group	Firmicutes	6.42952	38.6	-	JMLP01	53	6230	5932	5/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743384	GCA_000686805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/805/GCA_000686805.1_ASM68680v1	-	UNC41MFS5
Klebsiella sp. NFIX21	1566168	PRJEB17402	351606	Proteobacteria	Gammaproteobacteria	5.21518	58.2	-	FOSA01	22	5110	4880	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159392	GCA_900114145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/145/GCA_900114145.1_IMG-taxon_2600255298_annotated_assembly	-	NFIX21
Flavobacterium sp. 40-81	1896169	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	3.88522	39.6	-	MKTM01	44	3531	3443	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660555	GCA_001898245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/245/GCA_001898245.1_ASM189824v1	-	-
Acinetobacter sp. CIP 110321	1217699	PRJNA183234	183234	Proteobacteria	Gammaproteobacteria	4.30314	40.8	-	AQFL01	8	4080	3804	5/20/13	4/6/17	Scaffold	Broad Institute	SAMN01087863	GCA_000400715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/715/GCA_000400715.1_Acin_sp_CIP_110321_V1	-	CIP 110321
Paeniclostridium sordellii 8483	1172204	PRJNA158367	158367	Terrabacteria group	Firmicutes	7.81023	27.8	-	AJXR01	1432	7894	7850	6/9/15	10/15/15	Contig	Cornell University	SAMN03766269	GCA_001023455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/455/GCA_001023455.1_ASM102345v1	26059449	8483
Streptomyces sp. LaPpAH-108	1155714	PRJNA169751	169751	Terrabacteria group	Actinobacteria	6.85089	71.8	-	AREG01	14	6219	5947	4/19/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02441702	GCA_000373625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/625/GCA_000373625.1_ASM37362v1	-	LaPpAH-108
Pseudomonas sp. URMO17WK12:I4	1283292	PRJNA186474	186474	Proteobacteria	Gammaproteobacteria	4.91037	63.4	-	AZVM01	29	4496	4376	1/3/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02597217	GCA_000514215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/215/GCA_000514215.1_ASM51421v1	-	URMO17WK12:I4
Elizabethkingia anophelis	1117645	PRJNA263868	263868	FCB group	Bacteroidetes/Chlorobi group	4.01982	35.5	-	JSAA01	167	3729	2302	11/7/14	7/14/16	Contig	Sri Sathya Sai Institute of Higher Learning	SAMN03107819	GCA_000773465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/465/GCA_000773465.1_ASM77346v1	25540348	Endophthalmitis
Streptococcus sobrinus DSM 20742 = ATCC 33478	1123317	PRJNA185220	185220	Terrabacteria group	Firmicutes	2.13359	43.4	-	AUUD01	54	2109	1920	7/19/13	4/1/17	Contig	DOE Joint Genome Institute	SAMN02440709	GCA_000439045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/045/GCA_000439045.1_ASM43904v1	-	ATCC 33478
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.73827	66.5	-	LOUC01	135	8104	7662	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449164	GCA_001525895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/895/GCA_001525895.1_ASM152589v1	-	INT3-BP104
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.06533	64.1	-	FVKK01	16	5091	4901	3/10/17	3/18/17	Contig	SC	SAMEA2070900	GCA_900134925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/925/GCA_900134925.1_10208_3_33	-	458
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.06942	55.1	-	LDBI01	51	4987	4784	5/21/15	4/6/17	Contig	JCVI	SAMN03495945	GCA_001011305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/305/GCA_001011305.1_ASM101130v1	-	GN02420
Listeria ivanovii WSLC3009	1457190	PRJNA236792	236792	Terrabacteria group	Firmicutes	2.91954	37.2	chromosome:NZ_CP007172.1/CP007172.1	-	1	2900	2722	2/7/14	2/26/17	Complete Genome	ETH Zurich	SAMN02743816	GCA_000565155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/155/GCA_000565155.1_ASM56515v1	24786957	WSLC3009
Enterobacter hormaechei	158836	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.87319	55	-	JZZT01	65	4755	4520	3/19/15	3/25/17	Contig	JCVI	SAMN03283618	GCA_000956925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/925/GCA_000956925.1_ASM95692v1	-	35014
Citrobacter freundii	546	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.56825	51.8	-	LJES02	239	5669	5291	10/15/15	4/5/17	Contig	University of KwaZulu Natal	SAMN04011451	GCA_001317135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/135/GCA_001317135.2_48_S23v.02	-	ST63:944526466
Acinetobacter pittii	48296	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.046	38.7	-	LLCQ01	58	4038	3789	11/5/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145621	GCA_001432775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/775/GCA_001432775.1_ASM143277v1	-	ABBL010
Pseudomonas amygdali pv. sesami	86841	PRJNA287075	287075	Proteobacteria	Gammaproteobacteria	6.1677	57.9	-	LGKS01	197	5707	5283	9/18/15	4/4/17	Scaffold	University of Toronto	SAMN03837776	GCA_001294115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/115/GCA_001294115.1_PseHC_1	-	HC_1
Enterobacter asburiae	61645	PRJNA297498	297498	Proteobacteria	Gammaproteobacteria	4.81929	55.4	-	LLJN01	62	4700	4504	12/24/15	4/5/17	Scaffold	Statens Serum Institut	SAMN04124433	GCA_001482625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/625/GCA_001482625.1_ASM148262v1	-	AMA 590
Ornithobacterium rhinotracheale DSM 15997	867902	PRJNA50745	50745	FCB group	Bacteroidetes/Chlorobi group	2.39918	37.2	chromosome:NC_018016.1/CP003283.1	-	1	2320	2222	6/11/12	4/7/17	Complete Genome	JGI	SAMN02261366	GCA_000265465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/465/GCA_000265465.1_ASM26546v1	-	DSM 15997
Pseudoalteromonas sp. A601	1967839	PRJNA378700	378700	Proteobacteria	Gammaproteobacteria	4.89454	40	-	MXQF01	101	4340	4150	6/2/17	6/5/17	Contig	Shandong University	SAMN06560034	GCA_002165575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/575/GCA_002165575.1_ASM216557v1	-	A601
Klebsiella variicola	244366	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.61566	57.3	-	JURE01	173	5559	5278	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03198044	GCA_001067495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/495/GCA_001067495.1_ASM106749v1	26230489	837_KPNE
Acinetobacter nosocomialis	106654	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.83454	38.4	-	DDAY01	166	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456971	GCA_002333295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/295/GCA_002333295.1_ASM233329v1	28894102	-
Streptococcus oralis subsp. oralis	1891914	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.94646	41.3	-	NCUP01	9	1924	1833	4/18/17	4/21/17	Contig	Slagelse Hospital	SAMN06705619	GCA_002096515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/515/GCA_002096515.1_ASM209651v1	27325438	OD_332610_07
Lactobacillus paracasei	1597	PRJDB3859	353268	Terrabacteria group	Firmicutes	3.07838	46.2	-	BDIT01	87	3195	2984	11/10/16	4/17/17	Contig	"National Institute of Technology, Okinawa College"	SAMD00029052	GCA_001895185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/185/GCA_001895185.1_ASM189518v1	28153910	LC-Ikematsu
Gardnerella vaginalis ATCC 14018 = JCM 11026	585528	PRJNA46675	46675	Terrabacteria group	Actinobacteria	1.60416	41.2	-	ADNB01	145	1431	1218	4/7/10	3/30/17	Scaffold	Stanford Genome Technology Center	SAMN02471014	GCA_000178355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/355/GCA_000178355.1_ASM17835v1	20418427	ATCC 14018
Lactobacillus crispatus	47770	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.04608	36.8	-	LYRL01	67	2106	1896	7/14/17	7/17/17	Scaffold	University of Minnesota	SAMN04498994	GCA_002219045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/219/045/GCA_002219045.1_ASM221904v1	-	UMNLC22
Pectobacterium carotovorum	554	PRJEB18213	355497	Proteobacteria	Gammaproteobacteria	4.75946	51.9	-	FQWI01	25	4344	4195	12/2/16	4/6/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444147	GCA_900129615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/615/GCA_900129615.1_IMG-taxon_2695420962_annotated_assembly	-	DSM 30168
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.76002	47.6	-	MEAH01	77	3483	3306	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320409	GCA_001883435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/435/GCA_001883435.1_ASM188343v1	-	02/0972-2br
Flavobacterium psychrophilum	96345	PRJEB21067	396411	FCB group	Bacteroidetes/Chlorobi group	2.51963	32.4	-	FYEO01	275	2401	2187	7/29/17	8/7/17	Contig	INRA	SAMEA104125750	GCA_900186575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/575/GCA_900186575.1_FPC840_V1	-	FPC 840
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.18936	67.4	-	LOVK01	94	6530	6191	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449200	GCA_001525715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/715/GCA_001525715.1_ASM152571v1	-	MSMB1194
Aeromonas hydrophila	644	PRJNA361399	361399	Proteobacteria	Gammaproteobacteria	5.0285	61.1759	plasmid unnamed:NZ_CM007660.1/CM007660.1	MTPO01	174	4740	4462	2/1/17	4/6/17	Contig	University of Sao Paulo	SAMN06233223	GCA_001982465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/465/GCA_001982465.1_ASM198246v1	-	Ah-HSP
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.08124	63	-	DBEV01	33	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455064	GCA_002294115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/115/GCA_002294115.1_ASM229411v1	28894102	-
Vibrio sp. 03_296	2024409	PRJNA396847	396847	Proteobacteria	Gammaproteobacteria	5.82213	46.5	-	NPKW01	1414	5390	4865	8/22/17	8/22/17	Contig	Instituto Adolfo Lutz	SAMN07439671	GCA_002265885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/885/GCA_002265885.1_ASM226588v1	-	03_296
Staphylococcus saprophyticus	29385	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.54444	32.9	-	DEKY01	41	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451796	GCA_002354115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/115/GCA_002354115.1_ASM235411v1	28894102	-
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.20866	36.7	-	LPSO01	4	2338	2211	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305176	GCA_001560715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/715/GCA_001560715.1_NG05B_CO5_09	-	NG05B_CO5_09
Bifidobacterium breve	1685	PRJEB18553	373869	Terrabacteria group	Actinobacteria	2.34387	58.8	-	FTRK01	17	2101	1926	2/8/17	4/6/17	Contig	University of Tromso	SAMEA51820168	GCA_900157125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/125/GCA_900157125.1_Bifido_07_v1	-	-
Mycobacterium abscessus subsp. massiliense CCUG 48898 = JCM 15300	1001714	PRJNA65215	65215	Terrabacteria group	Actinobacteria	5.1952	64.1	-	AKVF01	5	5183	5054	6/19/12	3/3/17	Contig	Institute for Genome Sciences	SAMN00672674	GCA_000270665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/665/GCA_000270665.1_ASM27066v1	22965080	CCUG 48898
Moraxella catarrhalis	480	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.84413	41.7	-	JVAA01	61	1705	1586	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197814	GCA_001065675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/675/GCA_001065675.1_ASM106567v1	26230489	613_MCAT
Lactobacillus salivarius	1624	PRJNA357984	357984	Terrabacteria group	Firmicutes	2.07921	32.9	-	NBEC01	171	2070	1917	4/5/17	4/8/17	Scaffold	University College Cork	SAMN06163271	GCA_002079385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/385/GCA_002079385.1_ASM207938v1	-	LMG 14476
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.5043	56.8	-	MRXQ01	45	4367	4146	3/23/17	3/25/17	Contig	FDA/CFSAN	SAMN06124503	GCA_002071735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/071/735/GCA_002071735.1_ASM207173v1	-	MOD1-H1191
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.15524	55.6	-	FLAB01	63	6042	5736	5/19/16	2/21/17	Scaffold	SC	SAMEA2273697	GCA_900083605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/605/GCA_900083605.1_11983_8_48	-	2880STDY5682622
Enterobacter cloacae BIDMC 66	1439324	PRJNA234154	234154	Proteobacteria	Gammaproteobacteria	5.32684	54.7	-	JMUP01	15	5299	5024	5/19/14	3/24/17	Scaffold	Broad Institute	SAMN02581287	GCA_000692235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/235/GCA_000692235.1_Ente_cloa_BIDMC_66_V1	-	BIDMC 66
Proteus mirabilis	584	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.00737	38.7	-	JWBY01	182	3708	3569	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197088	GCA_001060325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/325/GCA_001060325.1_ASM106032v1	26230489	1134_PMIR
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.62496	32.6	-	CUGY01	97	2594	2462	3/31/15	3/26/17	Contig	SC	SAMEA1035140	GCA_001231545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/545/GCA_001231545.1_7068_7_55	-	104658
Propionibacterium acnes HL036PA1	765106	PRJNA49247	49247	Terrabacteria group	Actinobacteria	2.47775	60.1	-	ADYL01	13	2497	2358	7/30/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189208	GCA_000144565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/565/GCA_000144565.1_ASM14456v1	-	HL036PA1
Burkholderia sp. E7m39	1561196	PRJDB2729	297658	Proteobacteria	Betaproteobacteria	9.36268	62.6	-	BBSL01	774	8829	7771	10/1/15	4/11/17	Contig	"Laboratory of Microbial Genetics, Department of Environmental Life Sciences, Graduate School of Life Sciences, Tohoku University"	SAMD00020901	GCA_001319865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/865/GCA_001319865.1_ASM131986v1	-	E7m39
Campylobacter coli 7--1	887281	PRJNA52699	52699	Proteobacteria	delta/epsilon subdivisions	1.53022	31.3	-	AIMZ01	99	1601	1497	3/16/12	3/15/17	Contig	Cornell University	SAMN02429021	GCA_000253755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/755/GCA_000253755.2_ASM25375v2	-	7--1
Mannheimia haemolytica	75985	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.66055	41	-	LQDD01	101	2761	2596	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366499	GCA_001929965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/965/GCA_001929965.1_ASM192996v1	-	2165MH
Lactobacillus plantarum	1590	PRJNA256799	256799	Terrabacteria group	Firmicutes	3.31364	44.5	-	JPSU01	4	3194	3017	10/6/14	4/10/17	Scaffold	South China Agricultural University	SAMN02947174	GCA_000764285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/285/GCA_000764285.1_ASM76428v1	25428967	FMNP01
Serratia marcescens W2.3	1218513	PRJNA171722	171722	Proteobacteria	Gammaproteobacteria	5.23179	59.2	-	ALOV01	72	5024	4849	8/20/12	5/19/17	Contig	University of Malaya	SAMN02471845	GCA_000292365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/365/GCA_000292365.1_ASM29236v1	24148830	W2.3
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.2676	40.3	-	FPMP01	255	1118	950	5/10/17	5/24/17	Scaffold	WTSI	SAMEA1094329	GCA_900118955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/955/GCA_900118955.1_7067_6_76	-	S124_3A
Leuconostoc mesenteroides	1245	PRJNA300958	300958	Terrabacteria group	Firmicutes	1.81597	38.1	-	LMXE01	11	1727	1644	1/26/16	4/4/17	Scaffold	University of Wuerzburg	SAMN04231183	GCA_001541125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/125/GCA_001541125.1_ASM154112v1	-	GL1
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.09127	41.5	-	JJPZ01	185	3513	3323	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708965	GCA_000979825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/825/GCA_000979825.1_gtlEnvA5udCFS	25756680	3.H.T.1A.2
Yersinia enterocolitica	630	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	4.56939	47.2	-	CWIZ01	118	4324	4032	7/6/15	3/26/17	Contig	SC	SAMEA1486311	GCA_001182365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/365/GCA_001182365.1_8016_2_77	-	E736
Haemophilus somnus 129PT	205914	PRJNA322	322	Proteobacteria	Gammaproteobacteria	2.01288	37.1943	chromosome:NC_008309.1/CP000436.1; plasmid pHS129:NC_006298.1/CP000019.1	-	2	1876	1766	8/22/06	3/29/17	Complete Genome	DOE Joint Genome Institute	SAMN02598486	GCA_000011785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/785/GCA_000011785.1_ASM1178v1	-	129PT
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.47673	53.6	-	MKYI01	42	2416	2214	12/6/16	8/3/17	Contig	Institute for Medical Research	SAMN05877637	GCA_001889775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/775/GCA_001889775.1_ASM188977v1	28254972	rz356
Sinorhizobium meliloti 5A14	1194707	PRJNA167593	167593	Proteobacteria	Alphaproteobacteria	8.94255	62	-	AKZZ01	217	-	-	8/13/12	1/8/14	Contig	University of Florence	SAMN02471750	GCA_000287415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/415/GCA_000287415.1_SM5A14_v1	23431003	5A14
Bordetella bronchiseptica MBORD624	1331221	PRJNA202133	202133	Proteobacteria	Betaproteobacteria	5.30654	68	-	JGXI01	213	5082	4846	5/12/14	4/2/17	Contig	JCVI	SAMN02231442	GCA_000690295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/295/GCA_000690295.1_gbb25v01	25908122	MBORD624
Enterococcus faecalis	1351	PRJNA318633	318633	Terrabacteria group	Firmicutes	3.05407	37.1734	chromosome:NZ_CP015883.1/CP015883.1; plasmid Efsorialis-p1:NZ_CP015884.1/CP015884.1; plasmid Efsorialis-p2:NZ_CP015885.1/CP015885.1	-	3	3059	2886	6/2/17	6/5/17	Complete Genome	J. Craig Venter Institute	SAMN04859054	GCA_002163735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/735/GCA_002163735.1_ASM216373v1	-	sorialis
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31259	57.2358	chromosome 1:NZ_CP018562.1/CP018562.1; chromosome 2:NZ_CP018563.1/CP018563.1	-	2	3374	3144	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932972	GCA_002191775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/775/GCA_002191775.1_ASM219177v1	28388689	BwIM_TUR_60
Lactobacillus rhamnosus	47715	PRJNA287248	287248	Terrabacteria group	Firmicutes	2.93453	46.6	-	LFNB01	78	3015	2810	7/1/15	4/3/17	Contig	Vavilov Institute of General Genetics	SAMN03766175	GCA_001044415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/415/GCA_001044415.1_ASM104441v1	-	313
Pasteurella multocida subsp. multocida	44283	PRJNA298956	298956	Proteobacteria	Gammaproteobacteria	2.26014	40.2	-	LODS01	17	2142	2059	6/13/16	4/5/17	Contig	Sichuan Agricultural University	SAMN04185193	GCA_001662525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/525/GCA_001662525.1_C48_V1	-	C48-1
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.1268	41.2	-	CWFY01	77	2049	1877	6/23/15	3/26/17	Contig	SC	SAMEA1032795	GCA_001175705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/705/GCA_001175705.1_6817_1_72	-	EQUI0025
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.85067	66.6	-	JUMQ01	274	4533	4388	7/10/15	3/26/17	Contig	University of Washington	SAMN03198162	GCA_001075985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/985/GCA_001075985.1_ASM107598v1	26230489	942_SMAL
Bacillus amyloliquefaciens	1390	PRJNA270600	270600	Terrabacteria group	Firmicutes	4.01425	46.3	-	LQYO01	29	3955	3741	3/11/16	4/5/17	Scaffold	University of Groningen	SAMN03267280	GCA_001587325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/325/GCA_001587325.1_B4140	27174261	B4140
Chlamydia psittaci	83554	PRJNA312240	312240	PVC group	Chlamydiae	1.17924	39.0586	plasmid unnamed:NZ_CM004619.1/CM004619.1	LZRY01	9	1047	993	8/26/16	4/5/17	Contig	University of the Sunshine Coast	SAMN04496222	GCA_001714585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/585/GCA_001714585.1_ASM171458v1	-	Zo Pa
Enterococcus faecium TX1330	525279	PRJNA31463	31463	Terrabacteria group	Firmicutes	2.77797	38.3	-	ACHL01	38	2717	2555	3/10/09	4/10/17	Scaffold	Baylor College of Medicine	SAMN00002238	GCA_000159675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/675/GCA_000159675.1_ASM15967v1	-	TX1330
Neisseria gonorrhoeae SK8976	1352526	PRJNA209334	209334	Proteobacteria	Betaproteobacteria	2.11969	52.5	-	ATPJ01	444	2504	2108	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02729277	GCA_001025775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/775/GCA_001025775.1_ASM102577v1	-	SK8976
Streptococcus mutans TCI-222	1074162	PRJNA72067	72067	Terrabacteria group	Firmicutes	1.86163	36.8	-	AGLQ01	101	1863	1765	10/6/11	3/22/17	Contig	JCVI	SAMN02436454	GCA_000229505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/505/GCA_000229505.2_SMUT6-NEX_11-222	-	TCI-222
Enterococcus faecalis TX0470	749507	PRJNA47169	47169	Terrabacteria group	Firmicutes	2.87879	37.3	-	AECC01	42	2920	2798	9/9/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189114	GCA_000148265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/265/GCA_000148265.1_ASM14826v1	-	TX0470
Brucella suis 92/29	1160233	PRJNA173605	173605	Proteobacteria	Alphaproteobacteria	3.30881	57.3	-	AQNU01	10	3351	3152	4/16/13	4/1/17	Contig	Broad Institute	SAMN00811233	GCA_000366205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/205/GCA_000366205.1_Bruc_suis_92_29_V1	-	92/29
Treponema pallidum subsp. pallidum	161	PRJNA322283	322283	Spirochaetes	Spirochaetia	1.13914	52.8	chromosome:NZ_CP016048.1/CP016048.1	-	1	1066	1004	10/13/16	4/10/17	Chromosome	"National Institute of Health, Portugal"	SAMN05150353	GCA_001761565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/565/GCA_001761565.1_ASM176156v1	-	PT_SIF0877_3
Borrelia burgdorferi IPT125	1408879	PRJNA223339	223339	Spirochaetes	Spirochaetia	1.08912	28.4	-	AYCC01	429	-	-	12/3/13	12/3/13	Contig	Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris	SAMN02378846	GCA_000502115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/115/GCA_000502115.1_BorBurgIPT125	-	IPT125
Clostridium botulinum	1491	PRJNA290143	290143	Terrabacteria group	Firmicutes	3.07486	27.9	-	LHYS01	128	2959	2837	8/12/15	3/26/17	Scaffold	Anses	SAMN03876602	GCA_001267035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/035/GCA_001267035.1_ASM126703v1	26430029	58272-CD
Lysinibacillus sphaericus	1421	PRJNA315334	315334	Terrabacteria group	Firmicutes	4.83732	37.1563	chromosome:NZ_CP014856.1/CP014856.1; plasmid unnamed:NZ_CP014857.1/CP014857.1	-	2	4805	4526	3/28/16	4/5/17	Complete Genome	Universidad de los Andes	SAMN04555630	GCA_001598075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/075/GCA_001598075.1_ASM159807v1	-	III(3)7
Salinispora arenicola ATCC BAA-917	391967	PRJNA84391	84391	Terrabacteria group	Actinobacteria	4.74505	69	-	AIIF01	3823	-	-	4/27/12	1/8/14	Contig	Scripps Insitution of Oceanography	SAMN02470894	GCA_000259615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/615/GCA_000259615.1_ASM25961v1	22479523	CNH-643
Lactobacillus casei	1582	PRJNA350870	350870	Terrabacteria group	Firmicutes	3.15937	46.3	-	MODS01	96	3294	3114	4/13/17	4/17/17	Scaffold	University of Tasmania	SAMN05949223	GCA_002091975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/975/GCA_002091975.1_ASM209197v1	-	MJA 12
Lysinibacillus sphaericus C3-41	444177	PRJNA19619	19619	Terrabacteria group	Firmicutes	4.81746	37.1451	chromosome:CP000817.1; plasmid pBsph:CP000818.1	-	2	4972	4771	2/27/08	1/20/15	Complete Genome	"Wuhan Institute of Virology, Chinese Academy of Sciences"	SAMN02604328	GCA_000017965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/965/GCA_000017965.1_ASM1796v1	-	C3-41
Vibrio parahaemolyticus	670	PRJNA267229	267229	Proteobacteria	Gammaproteobacteria	5.47956	45	-	JTGS01	79	5252	5016	11/25/14	3/16/17	Scaffold	Bureau of Food Surveillance and Science Integration	SAMN03195675	GCA_000786855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/855/GCA_000786855.1_ASM78685v1	25635013	4.2548
Streptococcus mitis	28037	PRJNA302716	302716	Terrabacteria group	Firmicutes	2.03975	39.9	-	MUYO01	9	2098	1955	3/3/17	3/6/17	Scaffold	TAILORED-Treatment project	SAMN06286559	GCA_002014795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/795/GCA_002014795.1_ASM201479v1	-	CCUG 63687
Oenococcus oeni IOEB_C52	1428425	PRJNA229551	229551	Terrabacteria group	Firmicutes	1.90377	37.6	-	AZLF01	48	1920	1777	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02904288	GCA_000762045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/045/GCA_000762045.1_Oeoe_IOEB_C52_1.0	24901216	IOEB_C52
Xanthomonas oryzae pv. oryzae	64187	PRJNA269401	269401	Proteobacteria	Gammaproteobacteria	4.27651	63.9	-	JXDX01	427	4251	3423	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252500	GCA_001927545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/545/GCA_001927545.1_ASM192754v1	-	BXO447
Campylobacter fetus subsp. venerealis cfvi9825	1273127	PRJNA183989	183989	Proteobacteria	delta/epsilon subdivisions	1.93745	33.1	-	LRES01	100	2011	1882	8/5/16	4/5/17	Contig	Utrecht University	SAMN04419560	GCA_001699685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/685/GCA_001699685.1_ASM169968v1	27333878	cfvi9825
Xanthomonas citri subsp. citri	611301	PRJNA344031	344031	Proteobacteria	Gammaproteobacteria	5.56881	64.4911	chromosome:NZ_CM007619.1/CM007619.1; plasmid pLM199.1:NZ_CM007620.1/CM007620.1; plasmid pLM199.2:NZ_CM007621.1/CM007621.1	MSQV01	18	5039	4634	1/9/17	4/6/17	Chromosome	cirad	SAMN05822798	GCA_001939965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/965/GCA_001939965.1_ASM193996v1	-	LM199
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002	390333	PRJDB769	243681	Terrabacteria group	Firmicutes	1.7388	49.8	-	BBAN01	75	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000406	GCA_001311275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/275/GCA_001311275.1_ASM131127v1	-	JCM 1002
Yersinia pseudotuberculosis	633	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.71488	47.4	-	CIFL01	106	4314	4068	4/21/15	4/4/17	Scaffold	SC	SAMEA859910	GCA_001319725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/725/GCA_001319725.1_5139_2_11	-	PT682
Brucella abortus bv. 1 str. NI488	1051058	PRJNA74327	74327	Proteobacteria	Alphaproteobacteria	3.29576	57.2	-	AGVI01	5	3384	3148	2/3/12	3/23/17	Scaffold	Broad Institute	SAMN02596742	GCA_000245895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/895/GCA_000245895.1_Bruc_abor_bv1_NI488_V1	-	NI488
Francisella tularensis subsp. novicida FTG	563990	PRJNA30447	30447	Proteobacteria	Gammaproteobacteria	1.84423	32.4	-	ABXZ01	5	1784	1699	10/6/08	3/30/17	Scaffold	BioHealthBase	SAMN02469396	GCA_000156415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/156/415/GCA_000156415.1_ASM15641v1	-	FTG
Shigella boydii	621	PRJNA393761	393761	Proteobacteria	Gammaproteobacteria	4.58236	50.8	-	NMXT01	574	5319	4143	8/4/17	8/6/17	Contig	Christian Medical College	SAMN07340966	GCA_002241885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/885/GCA_002241885.1_ASM224188v1	-	FC666
Clostridioides difficile E12	1215082	PRJEB212	222727	Terrabacteria group	Firmicutes	4.00942	28.5	-	CAMZ01	353	3670	3538	10/14/13	3/16/17	Scaffold	LPBA	SAMEA3138910	GCA_000531535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/535/GCA_000531535.1_E12	24482682	E12
Vibrio cholerae 623-39	417397	PRJNA18493	18493	Proteobacteria	Gammaproteobacteria	4.16418	47.5	-	AAWG02	39	3939	3695	1/3/07	3/26/17	Scaffold	TIGR	SAMN02435871	GCA_000154005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/005/GCA_000154005.2_Vibrio_cholerae_623-39_V1	-	623-39
Ralstonia solanacearum P673	1431453	PRJNA230111	230111	Proteobacteria	Betaproteobacteria	5.31873	66.9	-	JALO01	251	4820	4528	1/31/14	4/2/17	Contig	University of FLorida	SAMN02585053	GCA_000525615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/615/GCA_000525615.1_P673cont1.0	24558246	P673
Bacillus thuringiensis serovar thuringiensis str. T01001	527025	PRJNA29719	29719	Terrabacteria group	Firmicutes	6.32312	34.8	chromosome:NZ_CM000748.1/CM000748.1	ACNA01	1	13145	12675	4/30/09	6/15/17	Chromosome	Naval Medical Research Center	SAMN00717297	GCA_000161515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/515/GCA_000161515.1_ASM16151v1	22645259	T01001
Burkholderia mallei China_7	1382519	PRJNA214255	214255	Proteobacteria	Betaproteobacteria	5.65554	68.7	-	AWGN01	197	6041	5570	1/31/14	4/4/17	Contig	Translational Genomics Research Institute	SAMN02303033	GCA_000565365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/365/GCA_000565365.2_BMchina7	-	China_7
Lysinibacillus sphaericus	1421	PRJNA299746	299746	Terrabacteria group	Firmicutes	4.84166	37.1436	chromosome:NZ_CP014643.1/CP014643.1; plasmid unnamed:NZ_CP014644.1/CP014644.1	-	2	4802	4497	3/8/16	4/5/17	Complete Genome	Universidad de los Andes	SAMN04215005	GCA_001581875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/875/GCA_001581875.1_ASM158187v1	27151786	OT4b.25
Legionella longbeachae	450	PRJNA369580	369580	Proteobacteria	Gammaproteobacteria	4.27103	37.1304	chromosome:NZ_CP020894.1/CP020894.1; plasmid pLLO-F1157CHC:NZ_CP020895.1/CP020895.1	-	2	3759	3560	4/27/17	5/3/17	Complete Genome	Canterbury Health Laboratories	SAMN06289612	GCA_002113845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/845/GCA_002113845.1_ASM211384v1	-	F1157CHC
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.99066	67	-	MUQE01	124	7657	7242	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001812	GCA_001991195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/195/GCA_001991195.1_ASM199119v1	-	VC7485
Lactobacillus reuteri	1598	PRJNA328440	328440	Terrabacteria group	Firmicutes	2.25544	38.2	-	MBLR01	188	2251	2036	8/11/16	4/10/17	Scaffold	Sheba Medical Center	SAMN05371094	GCA_001703865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/703/865/GCA_001703865.1_ASM170386v1	-	482_46
Bacteroides fragilis str. 1007-1-F #10	1339295	PRJNA206138	206138	FCB group	Bacteroidetes/Chlorobi group	5.53758	43.2	-	JGEA01	83	5019	4717	3/20/14	4/4/17	Contig	IGS	SAMN02314435	GCA_000598685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/685/GCA_000598685.2_ASM59868v2	-	1007-1-F #10
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.82583	50.7	-	CXHG01	435	5501	4687	7/16/15	2/24/17	Contig	SC	SAMEA1324208	GCA_001255975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/975/GCA_001255975.1_7655_8_4	-	H112620256
Persephonella marina EX-H1	123214	PRJNA12526	12526	Aquificae	Aquificae	1.98397	37.1242	chromosome:NC_012440.1/CP001230.1; plasmid unnamed:NC_012439.1/CP001231.1	-	2	2084	2033	3/25/09	4/17/17	Complete Genome	TIGR	SAMN02604029	GCA_000021565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/565/GCA_000021565.1_ASM2156v1	19136599	EX-H1
Bacillus licheniformis	1402	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.13528	46.2	-	NPMV01	110	4248	4113	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372725	GCA_002272305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/305/GCA_002272305.1_assembly-7714_v1	-	7714
Vibrio vulnificus	672	PRJNA299131	299131	Proteobacteria	Gammaproteobacteria	4.86095	46.8	-	LMYA01	47	4458	4288	12/7/16	4/6/17	Contig	Exeter University	SAMN04194078	GCA_001890565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/565/GCA_001890565.1_ASM189056v1	-	DAL-79040
Pseudomonas syringae pv. aptata	83167	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.97736	58.8	-	LJRP01	149	5368	5088	10/20/15	3/27/17	Scaffold	University of Toronto	SAMN03976295	GCA_001401335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/335/GCA_001401335.1_PttICMP459	-	ICMP459
Streptococcus suis 2651	1214154	PRJNA171420	171420	Terrabacteria group	Firmicutes	1.98353	41.4	-	ALLA01	49	2020	1832	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469522	GCA_000440435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/435/GCA_000440435.1_version1	-	2651
Streptococcus agalactiae ATCC 13813	888745	PRJNA53057	53057	Terrabacteria group	Firmicutes	2.28789	36.3	-	AEQQ01	21	2199	2061	1/20/11	3/15/17	Scaffold	Baylor College of Medicine	SAMN00217013	GCA_000186445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/445/GCA_000186445.1_ASM18644v1	-	ATCC 13813
Legionella longbeachae NSW150	661367	PRJEA39579	39579	Proteobacteria	Gammaproteobacteria	4.14916	37.119	chromosome:NC_013861.1/FN650140.1; plasmid pLLO:NC_014544.1/FN650141.1	-	2	3609	3478	2/13/10	5/18/17	Complete Genome	Institut Pasteur - Unite de Biologie des Bacteries Intracellulaires	SAMEA2272007	GCA_000091785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/091/785/GCA_000091785.1_ASM9178v1	20174605	NSW150
Macrococcus canis	1855823	PRJNA384167	384167	Terrabacteria group	Firmicutes	2.36341	37.1	chromosome:NZ_CP021059.1/CP021059.1	-	1	2497	2367	5/9/17	5/22/17	Complete Genome	University of Bern	SAMN06829615	GCA_002119805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/805/GCA_002119805.1_ASM211980v1	27902286	KM45013
Fusobacterium nucleatum subsp. polymorphum	76857	PRJNA270139	270139	Fusobacteria	Fusobacteriia	2.48149	27.0015	chromosome:CP013328.1; plasmid unnamed1:CP013329.1; plasmid unnamed2:CP013330.1	-	3	2382	2242	12/2/15	12/2/15	Chromosome	Chosun University	SAMN03263146	GCA_001455125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/125/GCA_001455125.1_ASM145512v1	-	ChDC F319
Bifidobacterium longum subsp. longum	1679	PRJNA286998	286998	Terrabacteria group	Actinobacteria	2.41759	60	-	LFDU01	72	2148	1955	8/31/15	4/4/17	Contig	University of Parma	SAMN03775040	GCA_001275745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/745/GCA_001275745.1_assBLOI2	-	BLOI2
Shigella flexneri 2a	42897	PRJNA278281	278281	Proteobacteria	Gammaproteobacteria	4.46862	50.6	-	LAIA01	408	4978	4222	6/1/15	3/5/17	Contig	U.S. Food and Drug Administration	SAMN03418663	GCA_001017355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/355/GCA_001017355.1_ASM101735v1	25980352	BS1041
Bacillus anthracis	1392	PRJNA243519	243519	Terrabacteria group	Firmicutes	5.22965	35.4	chromosome:NZ_CP008752.1/CP008752.1	-	1	5854	5435	8/21/14	3/24/17	Chromosome	Los Alamos National Laboratory	SAMN02736981	GCA_000742695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/695/GCA_000742695.1_ASM74269v1	25301645	delta Sterne
Pseudomonas putida	303	PRJNA289510	289510	Proteobacteria	Gammaproteobacteria	5.77208	61.9	-	LIYM01	80	5392	4962	9/14/15	4/4/17	Contig	"Indstitute of Fundamental Medicine and Biology, Kazan Federal University"	SAMN04014707	GCA_001282125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/125/GCA_001282125.1_ASM128212v1	-	PCL1760
Leptospira interrogans str. UI 13372	1049939	PRJNA74125	74125	Spirochaetes	Spirochaetia	5.09619	35.1	-	AHNV02	283	4732	4190	1/24/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436416	GCA_000244375.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/375/GCA_000244375.3_LintUI13372v0.2	-	UI 13372
Legionella longbeachae	450	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.16272	37.1	chromosome:NZ_CP020412.1/CP020412.1	-	1	3638	3475	3/29/17	4/1/17	Complete Genome	US Food and Drug Administration 	SAMN04875538	GCA_002073455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/455/GCA_002073455.1_ASM207345v1	-	FDAARGOS_201
Candidatus Nitrosotalea devanaterra	1078905	PRJEB10948	314743	TACK group	Thaumarchaeota	1.8053	37.1	chromosome 1:LN890280.1	-	1	2144	2103	3/8/16	3/8/16	Complete Genome	UNIVERSITY OF ABERDEEN	SAMEA3577360	GCA_900065925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/925/GCA_900065925.1_NDEV.embl.gz	-	-
Listeria ivanovii subsp. londoniensis	202752	PRJNA257574	257574	Terrabacteria group	Firmicutes	3.04503	37.1	chromosome:NZ_CP009576.1/CP009576.1	-	1	3020	2865	10/6/14	2/26/17	Complete Genome	ETH Zurich	SAMN02953498	GCA_000763495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/495/GCA_000763495.1_ASM76349v1	25614561	WSLC 30151
Streptococcus pneumoniae PCS70012	1159085	PRJNA89173	89173	Terrabacteria group	Firmicutes	2.08943	40.2	-	AKQY01	47	2295	2052	1/29/13	3/9/17	Scaffold	Washington University	SAMN02299521	GCA_000334595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/595/GCA_000334595.1_ASM33459v1	-	PCS70012
Streptococcus mutans LJ23	1155071	PRJDB67	88537	Terrabacteria group	Firmicutes	2.01563	37.1	chromosome:NC_017768.1/AP012336.1	-	1	2028	1878	3/6/12	3/23/17	Complete Genome	Tokyo Medical and Dental University Graduate School of Medical and Dental Sciences	SAMD00061051	GCA_000284575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/575/GCA_000284575.1_ASM28457v1	22535936	LJ23
Listeria ivanovii subsp. ivanovii PAM 55	881621	PRJNA13441	13441	Terrabacteria group	Firmicutes	2.92888	37.1	chromosome:NC_016011.1/FR687253.1	-	1	2909	2723	9/15/11	2/26/17	Complete Genome	Institut Pasteur	SAMEA3138408	GCA_000252975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/975/GCA_000252975.1_ASM25297v1	22072644	PAM 55
Haemophilus influenzae	727	PRJNA285227	285227	Proteobacteria	Gammaproteobacteria	1.8446	37.9	-	LFFN01	18	1841	1713	7/21/15	3/26/17	Contig	University of Oklahoma Health Sciences Center	SAMN03702714	GCA_001184435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/435/GCA_001184435.1_ASM118443v1	26404588	HI1988
Mycobacterium bovis	1765	PRJNA287158	287158	Terrabacteria group	Actinobacteria	4.29561	65.6	-	LFGY01	100	4238	3990	7/21/15	4/3/17	Contig	Institut Pasteur de Montevideo	SAMN03776961	GCA_001184735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/735/GCA_001184735.1_ASM118473v1	26543108	MbURU-001
Mycobacterium avium subsp. paratuberculosis 10-5975	1391995	PRJNA216934	216934	Terrabacteria group	Actinobacteria	4.63175	69	-	AYNW01	1256	4753	3460	12/9/13	4/2/17	Contig	National Animal Disease Center	SAMN02470594	GCA_000504865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/865/GCA_000504865.1_MAP_5975_version_1	-	Oct-75
Clostridium perfringens	1502	PRJNA327450	327450	Terrabacteria group	Firmicutes	3.59464	28	-	MARY01	64	3323	3153	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323900	GCA_001949625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/625/GCA_001949625.1_ASM194962v1	28062388	JFP941
Xanthomonas campestris	339	PRJNA257008	257008	Proteobacteria	Gammaproteobacteria	4.85551	63.9	-	LHUK01	461	4605	3691	8/31/15	4/11/17	Contig	µFORGE	SAMN03862116	GCA_001276975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/975/GCA_001276975.1_XANT001-SEQ-2-ASM-1	-	NCPPB4346
Lactococcus lactis subsp. cremoris GE214	1415168	PRJNA225671	225671	Terrabacteria group	Firmicutes	2.80103	35.4	-	AZSI01	243	2887	2599	7/18/14	4/2/17	Contig	Instituto de Productos Lacteos de Asturias (IPLA-CSIC)	SAMN02899667	GCA_000731635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/635/GCA_000731635.1_LlactisGE214	25342694	GE214
Bacillus cereus	1396	PRJNA378614	378614	Terrabacteria group	Firmicutes	4.82659	35.1	chromosome:CP020803.1	-	1	4961	4931	5/4/17	8/28/17	Chromosome	Universidade Federal de Pelotas	SAMN06554630	GCA_002117835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/835/GCA_002117835.1_ASM211783v1	-	25
Staphylococcus epidermidis NIH05001	979221	PRJNA62391	62391	Terrabacteria group	Firmicutes	2.61896	32.2	-	AKHE01	174	2699	2457	7/9/12	3/23/17	Contig	NISC - NIH Intramural Sequencing Center	SAMN00993295	GCA_000276105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/105/GCA_000276105.1_ASM27610v1	-	NIH05001
Lactobacillus helveticus DPC 4571	405566	PRJNA17811	17811	Terrabacteria group	Firmicutes	2.08093	37.1	chromosome:NC_010080.1/CP000517.1	-	1	2125	1720	11/15/07	3/30/17	Complete Genome	"Teagasc, Moorepark Food Research Centre"	SAMN02603893	GCA_000015385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/385/GCA_000015385.1_ASM1538v1	17993529	DPC 4571
Yersinia pestis 113	1330535	PRJNA201410	201410	Proteobacteria	Gammaproteobacteria	4.57141	47.5	-	AXDG01	141	4298	3860	10/21/13	3/24/17	Scaffold	"National Centre for Cell Science, Pune - 411007, India"	SAMN02470617	GCA_000475115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/115/GCA_000475115.2_YP113_v2	25320451	113
Pseudomonas fluorescens	294	PRJNA238413	238413	Proteobacteria	Gammaproteobacteria	6.24744	60.5	-	JENC01	74	5676	5488	6/16/14	4/4/17	Contig	Vrije Universiteit Brussel	SAMN02644483	GCA_000708695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/695/GCA_000708695.2_ATCC_17400	-	ATCC 17400
Pediococcus claussenii	187452	PRJNA290141	290141	Terrabacteria group	Firmicutes	1.98793	37.0967	chromosome:NZ_CP014936.1/CP014936.1; plasmid pL254-1:NZ_CP014937.1/CP014937.1; plasmid pL254-2:NZ_CP014938.1/CP014938.1; plasmid pL254-3:NZ_CP014939.1/CP014939.1	-	4	1973	1849	8/10/16	4/13/17	Complete Genome	Technische Universitaet Muenchen	SAMN04505732	GCA_001702235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/702/235/GCA_001702235.1_ASM170223v1	-	TMW 2.54
Leuconostoc carnosum JB16	1229758	PRJNA174298	174298	Terrabacteria group	Firmicutes	1.77347	37.091	chromosome:NC_018673.1/CP003851.1; plasmid pKLC1:NC_018674.1/CP003852.1; plasmid pKLC2:NC_018698.1/CP003853.1; plasmid pKLC3:NC_018675.1/CP003854.1; plasmid pKLC4:NC_018699.1/CP003855.1	-	5	1761	1653	9/28/12	4/8/17	Complete Genome	"Department of Life Science, Chung-Ang University, Republic of Korea "	SAMN02603179	GCA_000300135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/135/GCA_000300135.1_ASM30013v1	23144413	JB16
Enterococcus faecalis	1351	PRJNA368724	368724	Terrabacteria group	Firmicutes	3.24354	37.0835	chromosome:NZ_CP019512.1/CP019512.1; plasmid pA:NZ_CP019513.1/CP019513.1; plasmid pB:NZ_CP019514.1/CP019514.1	-	3	3404	3211	2/7/17	3/29/17	Complete Genome	Merck Research Laboratory	SAMN06270347	GCA_001989555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/555/GCA_001989555.1_ASM198955v1	-	CLB21560
Pediococcus claussenii	187452	PRJNA290141	290141	Terrabacteria group	Firmicutes	1.95003	37.0325	chromosome:NZ_CP014933.1/CP014933.1; plasmid pL253-1:NZ_CP014934.1/CP014934.1; plasmid pL253-2:NZ_CP014935.1/CP014935.1	-	3	1934	1815	8/10/16	4/13/17	Complete Genome	Technische Universitaet Muenchen	SAMN04505731	GCA_001702215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/702/215/GCA_001702215.1_ASM170221v1	-	TMW 2.53
Enterococcus hirae	1354	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.84544	37	chromosome:NZ_CP023011.1/CP023011.1	-	1	2593	2359	8/30/17	9/1/17	Complete Genome	US Food and Drug Administration 	SAMN04875571	GCA_002278015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/015/GCA_002278015.1_ASM227801v1	-	FDAARGOS_234
Lactobacillus helveticus	1587	PRJNA330602	330602	Terrabacteria group	Firmicutes	2.05307	37	chromosome:NZ_CP020029.1/CP020029.1	-	1	2092	1693	3/6/17	3/15/17	Complete Genome	State Research Institute of Highly Pure Biopreparations	SAMN05417795	GCA_001746265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/265/GCA_001746265.2_ASM174626v2	-	D75
Pseudomonas fluorescens	294	PRJNA262837	262837	Proteobacteria	Gammaproteobacteria	6.20768	60.4	-	JRXT01	49	5711	5512	12/16/14	4/2/17	Contig	"University of Michigan, Ann Arbor"	SAMN03086631	GCA_000801775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/775/GCA_000801775.1_PfAU2989	25635025	AU2989
Yersinia pestis	632	PRJNA243531	243531	Proteobacteria	Gammaproteobacteria	4.71968	47.6	-	JPMB01	7	4531	4223	9/15/14	3/24/17	Scaffold	Los Alamos National Laboratory	SAMN02923783	GCA_000754785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/785/GCA_000754785.1_YAU	25342679	Colorado 92
Lactobacillus helveticus	1587	PRJNA330602	330602	Terrabacteria group	Firmicutes	2.05832	37	chromosome:NZ_CP016827.1/CP016827.1	-	1	2097	1694	8/10/16	4/5/17	Complete Genome	State Research Institute of Highly Pure Biopreparations	SAMN05417796	GCA_001702095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/702/095/GCA_001702095.1_ASM170209v1	-	D76
Staphylococcus epidermidis NIH05005	979220	PRJNA62389	62389	Terrabacteria group	Firmicutes	2.49317	32	-	AKHD01	73	2493	2285	7/9/12	3/23/17	Contig	NISC - NIH Intramural Sequencing Center	SAMN00993293	GCA_000276125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/125/GCA_000276125.1_ASM27612v1	-	NIH05005
Bacillus cereus m1293	526973	PRJNA29657	29657	Terrabacteria group	Firmicutes	5.26973	35.3501	chromosome:NZ_CM000714.1/CM000714.1	ACLS01	1	11022	10610	4/30/09	6/15/17	Chromosome	Naval Medical Research Center	SAMN00717290	GCA_000003645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/003/645/GCA_000003645.1_ASM364v1	22645259	m1293
Lactococcus lactis	1358	PRJNA255324	255324	Terrabacteria group	Firmicutes	2.3057	34.9	-	JRFX01	64	2219	2080	9/29/14	4/2/17	Contig	Cornell University	SAMN02900673	GCA_000759595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/595/GCA_000759595.1_ASM75959v1	-	Bpl1
Xanthomonas campestris pv. campestris	340	PRJEB8116	275295	Proteobacteria	Gammaproteobacteria	5.07749	65.1	-	CDNB01	70	4536	4241	3/13/15	4/4/17	Contig	CEBITEC	SAMEA3208495	GCA_001372255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/255/GCA_001372255.1_B1459	-	-
Clostridium perfringens	1502	PRJNA327451	327451	Terrabacteria group	Firmicutes	3.61722	28	-	MARZ01	66	3314	3134	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323901	GCA_001949635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/635/GCA_001949635.1_ASM194963v1	28062388	JFP961
Mycobacterium avium subsp. avium 10-9275	1391991	PRJNA216924	216924	Terrabacteria group	Actinobacteria	4.79458	69.1	-	AYNY01	886	4872	3824	12/9/13	4/2/17	Contig	National Animal Disease Center	SAMN02470595	GCA_000504945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/945/GCA_000504945.1_MAA_9275	-	Oct-75
Mycobacterium bovis	1765	PRJEB7273	278029	Terrabacteria group	Actinobacteria	4.25561	65.6	-	CDHE01	118	4187	3960	3/15/15	4/4/17	Contig	ERA7	SAMEA2794687	GCA_001369335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/369/335/GCA_001369335.1_Assembly_of_Mycobacterium_caprae_MB5_genome	-	MB4
Haemophilus influenzae	727	PRJNA285224	285224	Proteobacteria	Gammaproteobacteria	1.77364	37.9	-	LFFQ01	21	1762	1637	7/21/15	3/26/17	Contig	University of Oklahoma Health Sciences Center	SAMN03702711	GCA_001184445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/445/GCA_001184445.1_ASM118444v1	26404588	HI2004
Candidatus Methylopumilus planktonicus	1581557	PRJEB7906	274245	Proteobacteria	Betaproteobacteria	1.35643	37	chromosome 1:NZ_LN827929.1/LN827929.1	-	1	1427	1373	3/14/15	4/10/17	Complete Genome	University of Zurich	SAMEA3165955	GCA_000981505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/505/GCA_000981505.1_Candidatus_Methylopumilus_planktonicus_MMS-2-53	-	MMS-10A-171
Listeria ivanovii subsp. londoniensis	202752	PRJNA257575	257575	Terrabacteria group	Firmicutes	2.99349	37	chromosome:NZ_CP009575.1/CP009575.1	-	1	2934	2773	10/6/14	2/26/17	Complete Genome	ETH Zurich	SAMN02953499	GCA_000763475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/475/GCA_000763475.1_ASM76347v1	25614561	WSLC 30167
Streptococcus pneumoniae PCS81218	1159086	PRJNA89175	89175	Terrabacteria group	Firmicutes	2.04436	39.7	-	AKQZ01	171	2317	2027	1/29/13	3/9/17	Scaffold	Washington University	SAMN02299522	GCA_000334615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/615/GCA_000334615.1_ASM33461v1	-	PCS81218
Sphingobacterium sp. ML3W	1538644	PRJNA259305	259305	FCB group	Bacteroidetes/Chlorobi group	5.32901	37	chromosome:NZ_CP009278.1/CP009278.1	-	1	4569	4396	9/4/14	4/9/17	Complete Genome	Delaware Technical Community College	SAMN03003634	GCA_000747525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/525/GCA_000747525.1_ASM74752v1	25614576	ML3W
Thermodesulfobacterium commune DSM 2178	289377	PRJNA12531	12531	Thermodesulfobacteria	Thermodesulfobacteria	1.76405	37	chromosome:NZ_CP008796.1/CP008796.1	-	1	1782	1702	7/28/14	4/9/17	Complete Genome	TIGR	SAMN02934663	GCA_000734015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/734/015/GCA_000734015.1_ASM73401v1	25635017	DSM 2178
Lactobacillus helveticus H9	767456	PRJNA49151	49151	Terrabacteria group	Firmicutes	1.87112	37	chromosome:NZ_CP002427.1/CP002427.1	-	1	1936	1546	2/3/14	4/2/17	Complete Genome	"The Key Laboratory of Dairy Biotechnology and Bioengineering, Education Ministry of P. R. China, Department of Food Science and Engineering, Inner Mongolia Agricultural University, China"	SAMN02641509	GCA_000525715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/715/GCA_000525715.1_ASM52571v1	-	H9
Leptospira interrogans serovar Medanensis str. UT053	1049922	PRJNA74127	74127	Spirochaetes	Spirochaetia	5.15764	35.2	-	AHNW02	174	4880	4303	1/24/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436502	GCA_000244395.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/395/GCA_000244395.3_gls454110v02	-	UT053
Pseudomonas putida	303	PRJNA289292	289292	Proteobacteria	Gammaproteobacteria	5.7088	61.4	-	LGRH01	188	5385	5126	9/17/15	4/4/17	Contig	85303	SAMN03852107	GCA_001293025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/025/GCA_001293025.1_ASM129302v1	-	IOFA1
Bacillus anthracis	1392	PRJNA243518	243518	Terrabacteria group	Firmicutes	5.50835	35.2705	chromosome:NZ_CP007704.1/CP007704.1; plasmid unnamed_1:NZ_CP007702.1/CP007702.1; plasmid unnamed_2:NZ_CP007703.1/CP007703.1	-	3	6137	5692	8/21/14	3/24/17	Chromosome	Los Alamos National Laboratory	SAMN02736972	GCA_000742875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/875/GCA_000742875.1_ASM74287v1	25301645	BFV
Shigella flexneri Y	424720	PRJNA278281	278281	Proteobacteria	Gammaproteobacteria	4.45396	50.6	-	LAIC01	374	4952	4226	6/1/15	3/5/17	Contig	U.S. Food and Drug Administration	SAMN03420874	GCA_001017365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/365/GCA_001017365.1_ASM101736v1	25980352	BS1043
Bifidobacterium longum subsp. longum	1679	PRJNA297703	297703	Terrabacteria group	Actinobacteria	2.23377	60	-	LKSV01	31	1915	1789	11/25/15	4/4/17	Contig	UC Davis	SAMN04129541	GCA_001447955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/447/955/GCA_001447955.1_ASM144795v1	26571226	9
Fusobacterium nucleatum subsp. animalis ATCC 51191	997347	PRJNA64727	64727	Fusobacteria	Fusobacteriia	2.47654	29.2	-	AFQD01	465	2822	2777	7/13/11	8/20/13	Scaffold	Baylor College of Medicine	SAMN02299446	GCA_000220825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/825/GCA_000220825.1_ASM22082v1	-	ATCC 51191
Maribacter sp. HTCC2170	313603	PRJNA13595	13595	FCB group	Bacteroidetes/Chlorobi group	3.8683	37	chromosome:NC_014472.1/CP002157.1	-	1	3400	3327	8/24/10	4/17/17	Complete Genome	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02603923	GCA_000153165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/165/GCA_000153165.2_ASM15316v2	21037013	HTCC2170
Pediococcus claussenii ATCC BAA-344	701521	PRJNA42741	42741	Terrabacteria group	Firmicutes	1.97879	36.999	chromosome:NC_016605.1/CP003137.1; plasmid pPECL-1:NC_016635.1/CP003138.1; plasmid pPECL-2:NC_016606.1/CP003139.1; plasmid pPECL-3:NC_016636.1/CP003140.1; plasmid pPECL-4:NC_016607.1/CP003141.1; plasmid pPECL-5:NC_016608.1/CP003142.1; plasmid pPECL-6:NC_017017.1/CP003143.1; plasmid pPECL-7:NC_017018.1/CP003144.1; plasmid pPECL-8:NC_017019.1/CP003145.2	-	9	1955	1854	12/14/11	4/7/17	Complete Genome	University of Saskatchewan	SAMN02604240	GCA_000237995.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/995/GCA_000237995.2_ASM23799v2	22328764	ATCC BAA-344
Streptococcus agalactiae ZQ0910	1156939	PRJNA158929	158929	Terrabacteria group	Firmicutes	2.03491	35.5	-	AKAP01	14	2058	1957	6/4/12	3/15/17	Scaffold	"Fisheries College, Guangdong Ocean University"	SAMN02469855	GCA_000264975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/975/GCA_000264975.1_ASM26497v1	22933761	ZQ0910
Streptococcus suis 2726	1214161	PRJNA171421	171421	Terrabacteria group	Firmicutes	2.22316	41.1	-	ALLB01	55	2238	2084	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469550	GCA_000440455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/455/GCA_000440455.1_version1	-	2726
Pseudomonas syringae pv. alisalensis	663709	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	6.1021	58.7	-	LJPP01	400	5775	5287	10/20/15	3/27/17	Scaffold	University of Toronto	SAMN03976293	GCA_001401375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/375/GCA_001401375.1_PalICMP15200	-	ICMP15200
Vibrio vulnificus	672	PRJNA299130	299130	Proteobacteria	Gammaproteobacteria	4.8852	46.6	-	LMXZ01	101	4539	4320	12/7/16	4/6/17	Contig	Exeter University	SAMN04194077	GCA_001890575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/575/GCA_001890575.1_ASM189057v1	-	DAL-79087
Bacillus licheniformis	1402	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.1983	46.1	-	NPCV01	146	4336	4206	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372724	GCA_002272315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/315/GCA_002272315.1_assembly-7713_v1	-	7713
Enterococcus hirae	1354	PRJNA319460	319460	Terrabacteria group	Firmicutes	2.96006	36.9652	chromosome:NZ_CP015516.1/CP015516.1; plasmid unnamed:NZ_CP015517.1/CP015517.1	-	2	2685	2512	5/10/16	4/5/17	Complete Genome	China National Center for Food Safety Risk Assessment	SAMN04892752	GCA_001641305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/305/GCA_001641305.1_ASM164130v1	-	R17
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.73098	50.7	-	CXHF01	410	5342	4553	7/16/15	2/24/17	Contig	SC	SAMEA1324200	GCA_001256195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/195/GCA_001256195.1_7655_8_5	-	H112540448
Bacteroides fragilis str. 1009-4-F #10	1339297	PRJNA206140	206140	FCB group	Bacteroidetes/Chlorobi group	5.11728	43.2	-	JGED01	63	4498	4224	3/20/14	4/18/17	Contig	IGS	SAMN02314519	GCA_000598705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/705/GCA_000598705.1_ASM59870v1	-	1009-4-F #10
Lactobacillus reuteri	1598	PRJNA328442	328442	Terrabacteria group	Firmicutes	2.63919	38.5	-	MBLT01	523	2581	2285	8/11/16	4/5/17	Scaffold	Sheba Medical Center	SAMN05371179	GCA_001703875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/703/875/GCA_001703875.1_ASM170387v1	-	484_32
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.87746	67	-	MUQG01	117	7538	7102	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001814	GCA_001991215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/215/GCA_001991215.1_ASM199121v1	-	VC7489
Salegentibacter sp. T436	1729720	PRJNA297197	297197	FCB group	Bacteroidetes/Chlorobi group	4.08655	36.9	chromosome:NZ_CP012872.1/CP012872.1	-	1	3638	3518	1/4/17	4/16/17	Complete Genome	Oak Ridge National Laboratory	SAMN04116623	GCA_001932675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/675/GCA_001932675.1_ASM193267v1	-	T436
Streptococcus mutans	1309	PRJNA298029	298029	Terrabacteria group	Firmicutes	1.98444	36.9	chromosome:NZ_CP013237.1/CP013237.1	-	1	1988	1844	2/11/16	3/27/17	Complete Genome	University of Florida	SAMN04155244	GCA_001558215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/215/GCA_001558215.1_ASM155821v1	-	NG8
Burkholderia mallei strain_6	1382520	PRJNA214255	214255	Proteobacteria	Betaproteobacteria	5.46826	68.6	-	AWGO01	182	5854	5288	1/31/14	4/2/17	Contig	Translational Genomics Research Institute	SAMN02303034	GCA_000565385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/385/GCA_000565385.1_BMstrain6	-	strain_6
Bacillus thuringiensis serovar pakistani str. T13001	527027	PRJNA29721	29721	Terrabacteria group	Firmicutes	6.03751	35	chromosome:NZ_CM000750.1/CM000750.1	ACNC01	1	12740	11981	4/30/09	5/18/17	Chromosome	Naval Medical Research Center	SAMN00723189	GCA_000161555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/555/GCA_000161555.1_ASM16155v1	22645259	T13001
Ralstonia solanacearum	305	PRJNA259632	259632	Proteobacteria	Betaproteobacteria	5.62936	66.7	-	JQOI01	94	5024	4719	9/8/14	4/2/17	Contig	University of Exeter	SAMN03009919	GCA_000749995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/995/GCA_000749995.1_ASM74999v1	-	23-10BR
Vibrio cholerae V52	345076	PRJNA15670	15670	Proteobacteria	Gammaproteobacteria	4.0453	47.5	-	AAKJ03	59	3914	3677	9/13/05	3/26/17	Scaffold	TIGR	SAMN02435881	GCA_000167935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/935/GCA_000167935.2_Vibrio_cholerae_V52_V1	-	V52
Clostridioides difficile E25	1215066	PRJEB196	222734	Terrabacteria group	Firmicutes	4.1047	28.3	-	CAMJ01	441	3796	3630	10/14/13	3/16/17	Scaffold	LPBA	SAMEA3138912	GCA_000531595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/595/GCA_000531595.1_E25	24482682	E25
Shigella boydii	621	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.79839	50.9	-	NQBB01	148	5093	4629	8/11/17	8/15/17	Contig	JCVI	SAMN07450673	GCA_002247435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/435/GCA_002247435.1_ASM224743v1	-	ECH+10
Francisella tularensis subsp. tularensis str. SCHU S4 substr. FSC237	1341660	PRJNA217352	217352	Proteobacteria	Gammaproteobacteria	1.89356	32.3	-	JIDS01	2	1927	1665	4/11/14	4/2/17	Scaffold	Broad Institute	SAMN02335350	GCA_000628945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/945/GCA_000628945.1_Fran_tula_Schu_S4_FSC043_V1	-	Schu S4 substr. FSC043
Brucella abortus bv. 1 str. NI010	1051059	PRJNA74329	74329	Proteobacteria	Alphaproteobacteria	3.2967	57.2	-	AGVJ01	3	3383	3150	2/3/12	3/23/17	Scaffold	Broad Institute	SAMN02596743	GCA_000245915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/915/GCA_000245915.1_Bruc_abor_bv1_NI010_V1	-	NI010
Yersinia pseudotuberculosis	633	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.63397	47.5	-	CGBX01	76	4305	4060	3/15/15	4/4/17	Scaffold	SC	SAMEA859920	GCA_001319765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/765/GCA_001319765.1_5139_2_6	-	260
Lactobacillus delbrueckii subsp. lactis DSM 20072	888027	PRJNA354489	354489	Terrabacteria group	Firmicutes	2.63389	49	-	MRUN01	16	2670	2166	3/3/17	3/3/17	Contig	Korea University	SAMN06046522	GCA_002017855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/855/GCA_002017855.1_ASM201785v1	-	DSM 20072
Xanthomonas citri subsp. citri	611301	PRJNA344031	344031	Proteobacteria	Gammaproteobacteria	5.66709	64.3676	chromosome:NZ_CM007622.1/CM007622.1; plasmid pLM180.1:NZ_CM007623.1/CM007623.1; plasmid pLM180.2:NZ_CM007624.1/CM007624.1; plasmid pLM180.3:NZ_CM007625.1/CM007625.1; plasmid pLM180.4:NZ_CM007626.1/CM007626.1	MSQW01	10	5198	4736	1/9/17	4/11/17	Chromosome	cirad	SAMN05823141	GCA_001939985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/985/GCA_001939985.1_ASM193998v1	-	LM180
Campylobacter fetus subsp. venerealis LMG 6570 = CCUG 33900	1265739	PRJNA183997	183997	Proteobacteria	delta/epsilon subdivisions	1.81609	33.2	-	LREV01	53	1862	1754	8/5/16	4/5/17	Contig	Utrecht University	SAMN04419574	GCA_001699715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/715/GCA_001699715.1_ASM169971v1	27333878	CCUG 33900
Xanthomonas oryzae pv. oryzae	64187	PRJNA269402	269402	Proteobacteria	Gammaproteobacteria	4.21331	63.9	-	JXDY01	430	4165	3378	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252501	GCA_001927555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/555/GCA_001927555.1_ASM192755v1	-	BXO454
Oenococcus oeni IOEB_1491	1428415	PRJNA229532	229532	Terrabacteria group	Firmicutes	1.77257	37.9	-	AZLG01	42	1819	1648	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02904289	GCA_000762065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/065/GCA_000762065.1_Oeoe_IOEB_1491_1.0	24901216	IOEB_1491
Streptococcus mitis	28037	PRJNA302716	302716	Terrabacteria group	Firmicutes	1.98919	39.9	-	MUXS01	26	1992	1845	3/3/17	3/6/17	Scaffold	TAILORED-Treatment project	SAMN06302341	GCA_002014875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/875/GCA_002014875.1_ASM201487v1	-	CCUG 61082
Vibrio parahaemolyticus	670	PRJNA267230	267230	Proteobacteria	Gammaproteobacteria	5.36749	44.8	-	JTGT01	688	5066	4863	11/25/14	3/16/17	Scaffold	Bureau of Food Surveillance and Science Integration	SAMN03195677	GCA_000786865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/865/GCA_000786865.1_ASM78686v1	25635013	9.5357
Lactobacillus kunkeei	148814	PRJNA298292	298292	Terrabacteria group	Firmicutes	1.61452	36.9	chromosome:NZ_CP012920.1/CP012920.1	-	1	1557	1446	10/14/15	4/4/17	Complete Genome	Universidad Mayor	SAMN04157996	GCA_001314945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/945/GCA_001314945.1_ASM131494v1	27114887	MP2
Lactobacillus casei	1582	PRJNA255080	255080	Terrabacteria group	Firmicutes	3.27253	47.9	-	JPKN02	297	2891	2443	7/29/14	11/6/14	Scaffold	Indian Institute of Chemical Biology	SAMN02910029	GCA_000736295.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/295/GCA_000736295.3_L._casei_Hybrid_assembly	-	Lbs2
Salinispora arenicola CNT-088	1149863	PRJNA84269	84269	Terrabacteria group	Actinobacteria	5.2874	69.4	-	AIIJ01	2304	-	-	4/27/12	1/8/14	Contig	Scripps Insitution of Oceanography	SAMN02470892	GCA_000259675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/675/GCA_000259675.1_ASM25967v1	22479523	CNT-088
Lactobacillus helveticus	1587	PRJNA274663	274663	Terrabacteria group	Firmicutes	2.08406	36.9	chromosome:NZ_CP011386.1/CP011386.1	-	1	2204	1771	5/11/15	4/3/17	Complete Genome	Nanjing Agricultural University	SAMN03328961	GCA_001006025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/025/GCA_001006025.1_ASM100602v1	-	MB2-1
Clostridium botulinum	1491	PRJNA290143	290143	Terrabacteria group	Firmicutes	2.82587	28	-	LHYT01	114	2689	2558	8/12/15	3/26/17	Scaffold	Anses	SAMN03876603	GCA_001267045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/045/GCA_001267045.1_ASM126704v1	26430029	58752-CD
Treponema pallidum subsp. pallidum	161	PRJNA271237	271237	Spirochaetes	Spirochaetia	1.13984	52.8	chromosome:NZ_CP010422.1/CP010422.1	-	1	1066	1004	1/10/17	4/6/17	Chromosome	University of Washington	SAMN03273360	GCA_001941545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/545/GCA_001941545.1_ASM194154v1	-	Seattle Nichols
Brucella suis 92/63	1160230	PRJNA173593	173593	Proteobacteria	Alphaproteobacteria	3.32492	57.2	-	AQNV01	2	3390	3158	4/16/13	4/1/17	Contig	Broad Institute	SAMN00811234	GCA_000366225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/225/GCA_000366225.1_Bruc_suis_92_63_V1	-	92/63
Enterococcus faecalis TX0312	749505	PRJNA47165	47165	Terrabacteria group	Firmicutes	2.78566	37.6	-	AECB01	42	2822	2697	9/9/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189112	GCA_000148305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/305/GCA_000148305.1_ASM14830v1	-	TX0312
Streptococcus mutans TCI-223	1074163	PRJNA72069	72069	Terrabacteria group	Firmicutes	1.80957	37	-	AGLR01	134	1849	1733	10/6/11	3/22/17	Contig	JCVI	SAMN02436517	GCA_000229525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/525/GCA_000229525.2_SMUT6-NEX_12-223	-	TCI-223
Neisseria gonorrhoeae SK15454	1352522	PRJNA209342	209342	Proteobacteria	Betaproteobacteria	2.11814	52.5	-	ATPN01	466	2519	2106	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02338790	GCA_001025805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/805/GCA_001025805.1_ASM102580v1	-	SK15454
Enterococcus faecium TC 6	565666	PRJNA32161	32161	Terrabacteria group	Firmicutes	3.05564	38.4	-	ACOB01	125	3060	2788	9/15/09	3/22/17	Scaffold	Broad Institute	SAMN02595327	GCA_000161855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/855/GCA_000161855.1_EFCM_TC6_V1	-	TC 6
Chlamydia psittaci	83554	PRJNA312244	312244	PVC group	Chlamydiae	1.21312	39.0604	plasmid unnamed:NZ_CM004618.1/CM004618.1	LZRZ01	58	1093	1024	8/26/16	4/5/17	Contig	University of the Sunshine Coast	SAMN04496844	GCA_001714595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/595/GCA_001714595.1_ASM171459v1	-	Fa An
Bacillus amyloliquefaciens	1390	PRJNA270600	270600	Terrabacteria group	Firmicutes	3.9682	45.7	-	LQYP01	30	4104	3874	3/11/16	4/5/17	Scaffold	University of Groningen	SAMN03267281	GCA_001587435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/435/GCA_001587435.1_B425	27174261	B425
Stenotrophomonas maltophilia	40324	PRJNA277366	277366	Proteobacteria	Gammaproteobacteria	4.78482	66.6	-	JZIV01	18	4423	4253	8/26/15	3/26/17	Contig	Icahn School of Medicine at Mount Sinai	SAMN03389652	GCA_001275075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/075/GCA_001275075.1_ISMMS5v1	26324280	ISMMS5
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.14759	41.2	-	CWBX01	84	2107	1910	6/24/15	3/26/17	Contig	SC	SAMEA1032796	GCA_001175725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/725/GCA_001175725.1_6903_5_82	-	EQUI0131
Pasteurella multocida	747	PRJNA339731	339731	Proteobacteria	Gammaproteobacteria	2.44635	40.7	-	MDXJ01	48	2343	2145	9/2/16	4/5/17	Contig	Sardarkrushinagar Dantiwada Agricultural University	SAMN05603852	GCA_001857595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/595/GCA_001857595.1_ASM185759v1	-	HS SKN01
Lactobacillus rhamnosus	47715	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.89944	46.7	-	JVLT01	32	2923	2756	7/10/15	4/3/17	Contig	University of Washington	SAMN03197509	GCA_001064515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/515/GCA_001064515.1_ASM106451v1	26230489	319_LRHA
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31276	57.2358	chromosome 1:NZ_CP018564.1/CP018564.1; chromosome 2:NZ_CP018565.1/CP018565.1	-	2	3375	3150	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932965	GCA_002191795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/795/GCA_002191795.1_ASM219179v1	28388689	BwIM_XXX_12
Treponema pedis str. T A4	1291379	PRJNA188500	188500	Spirochaetes	Spirochaetia	2.88932	36.9	chromosome:NC_022097.1/CP004120.1	-	1	2645	2473	8/16/13	4/1/17	Complete Genome	Swedish University of Agricultural Sciences	SAMN02603890	GCA_000447675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/675/GCA_000447675.1_ASM44767v1	23977007	T A4
Bordetella bronchiseptica MBORD635	1331223	PRJNA202135	202135	Proteobacteria	Betaproteobacteria	5.0925	68.3	-	JGXK01	55	4827	4698	5/12/14	4/2/17	Contig	JCVI	SAMN02231440	GCA_000690315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/315/GCA_000690315.1_gbb27v01	25908122	MBORD635
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.45011	53.6	-	MKYG01	35	2401	2193	12/6/16	8/3/17	Contig	Institute for Medical Research	SAMN05868145	GCA_001889785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/785/GCA_001889785.1_ASM188978v1	28254972	rz252
Lactobacillus helveticus CNRZ32	326425	PRJNA46731	46731	Terrabacteria group	Firmicutes	2.22596	36.9	chromosome:NC_021744.1/CP002081.1	-	1	2316	1833	7/11/13	9/18/17	Complete Genome	Utah State University	SAMN02604285	GCA_000422165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/165/GCA_000422165.1_ASM42216v1	23969047	CNRZ32
Yersinia enterocolitica	630	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	4.55214	46.9	-	CTFQ01	108	4307	4034	3/26/15	3/26/17	Contig	SC	SAMEA1486353	GCA_001220085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/085/GCA_001220085.1_8016_2_67	-	IP21447
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.03416	41.6	-	JJQB01	144	3480	3284	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708933	GCA_000979845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/845/GCA_000979845.1_gtlEnvA5udCFS	25756680	1.F.A.1B.3
Leuconostoc mesenteroides subsp. cremoris	33965	PRJNA352459	352459	Terrabacteria group	Firmicutes	1.63929	38.1	-	MPAS01	109	1762	1371	4/14/17	4/17/17	Scaffold	Norwegian University of Life Sciences	SAMN05981469	GCA_002092215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/215/GCA_002092215.1_ASM209221v1	28217118	LMGCF07
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.2533	40.6	-	FPMQ01	116	1162	1046	5/10/17	5/24/17	Scaffold	WTSI	SAMEA1903250	GCA_900118975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/975/GCA_900118975.1_9471_4_63	-	162STDY5437296
Serratia marcescens VGH107	1263833	PRJNA182128	182128	Proteobacteria	Gammaproteobacteria	5.51912	59.5	-	AORJ01	83	5309	5107	2/27/13	5/19/17	Contig	"Department of Computer Science and Information Engineering, National Chung Cheng University"	SAMN02470620	GCA_000342205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/205/GCA_000342205.1_SerMar_1.0	23682149	VGH107
Lactobacillus plantarum	1590	PRJNA277393	277393	Terrabacteria group	Firmicutes	3.35307	44.4	-	JZSB01	52	3345	3051	3/31/15	3/25/17	Scaffold	"No. 17 Qinghua East Road, Hai-dian District"	SAMN03390058	GCA_000966475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/475/GCA_000966475.1_ASM96647v1	26370773	NL42
Mannheimia haemolytica	75985	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.66896	41	-	LQDF01	100	2776	2608	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366501	GCA_001930025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/025/GCA_001930025.1_ASM193002v1	-	2190MH
Campylobacter coli 132-6	887282	PRJNA52701	52701	Proteobacteria	delta/epsilon subdivisions	1.53199	31.4	-	AINA01	148	1604	1504	3/16/12	3/15/17	Contig	Cornell University	SAMN02429058	GCA_000253775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/775/GCA_000253775.2_ASM25377v2	-	132-6
Burkholderia sp. E7m48	1561197	PRJDB2729	297658	Proteobacteria	Betaproteobacteria	8.49671	62.8	-	BBSM01	421	7792	7318	10/1/15	4/11/17	Contig	"Laboratory of Microbial Genetics, Department of Environmental Life Sciences, Graduate School of Life Sciences, Tohoku University"	SAMD00020902	GCA_001319905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/905/GCA_001319905.1_ASM131990v1	-	E7m48
Propionibacterium acnes HL036PA2	765107	PRJNA49249	49249	Terrabacteria group	Actinobacteria	2.47667	60	-	ADYU01	13	2502	2369	7/30/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189209	GCA_000144585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/585/GCA_000144585.1_ASM14458v1	-	HL036PA2
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.48937	32.6	-	CUFQ01	89	2477	2316	3/31/15	3/26/17	Contig	SC	SAMEA1035111	GCA_001231725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/725/GCA_001231725.1_7068_7_23	-	W_75
Proteus mirabilis	584	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.99693	38.7	-	JWBG01	201	3696	3565	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197106	GCA_001060355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/355/GCA_001060355.1_ASM106035v1	26230489	1150_PMIR
Enterobacter cloacae BIDMC 67	1439325	PRJNA234155	234155	Proteobacteria	Gammaproteobacteria	4.86649	54.7	-	JMUQ01	4	4791	4519	5/19/14	3/24/17	Scaffold	Broad Institute	SAMN02581288	GCA_000692255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/255/GCA_000692255.1_Ente_cloa_BIDMC_67_V1	-	BIDMC 67
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.37825	54.8	-	FKZK01	72	6249	5962	5/19/16	2/21/17	Scaffold	SC	SAMEA2273758	GCA_900083615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/615/GCA_900083615.1_11983_8_91	-	2880STDY5682683
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.50645	56.8	-	MRXT01	45	4366	4141	3/23/17	3/25/17	Contig	FDA/CFSAN	SAMN06124505	GCA_002071775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/071/775/GCA_002071775.1_ASM207177v1	-	MOD1-A31
Lactobacillus salivarius	1624	PRJNA357984	357984	Terrabacteria group	Firmicutes	1.71932	32.6	-	NBEE01	45	1641	1544	4/5/17	4/8/17	Scaffold	University College Cork	SAMN06163269	GCA_002079405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/405/GCA_002079405.1_ASM207940v1	-	JCM 1230
Moraxella catarrhalis	480	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	1.88501	41.5	-	LWAH01	18	1739	1639	4/26/16	4/5/17	Scaffold	TAILORED-Treatment project	SAMN04606841	GCA_001632285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/285/GCA_001632285.1_ASM163228v1	27313296	CCUG 353
Mycobacterium abscessus 4S-0116-R	1001725	PRJNA65179	65179	Terrabacteria group	Actinobacteria	4.83953	64.2	-	AKVD01	5	4837	4731	6/19/12	3/18/17	Contig	Institute for Genome Sciences	SAMN00728552	GCA_000270685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/685/GCA_000270685.2_ASM27068v2	-	4S-0116-R
Bifidobacterium breve MCC 1605	1365969	PRJNA215983	215983	Terrabacteria group	Actinobacteria	2.32401	59	-	AWFV01	37	2080	1870	8/11/15	4/3/17	Scaffold	"Food Science and Technology Institute, Morinaga Milk Industry Co., Ltd"	SAMN03978805	GCA_001263935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/935/GCA_001263935.1_ASM126393v1	26236711	MCC 1605
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.24005	36.7	-	LPSP01	7	2380	2277	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305177	GCA_001560725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/725/GCA_001560725.1_NG05B_CO5_10	-	NG05B_CO5_10
Staphylococcus saprophyticus	29385	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.3054	33	-	DFUG01	13	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455647	GCA_002379625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/625/GCA_002379625.1_ASM237962v1	28894102	-
Vibrio sp. JB196	1434844	PRJEB19167	374441	Proteobacteria	Gammaproteobacteria	3.89381	40.5	-	FUKS01	55	3550	3417	2/11/17	5/31/17	Contig	MICALIS	SAMEA81166168	GCA_900163805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/805/GCA_900163805.1_ASM90016380v1	-	JB196
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.33363	63.6	-	DBEO01	86	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453941	GCA_002294535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/535/GCA_002294535.1_ASM229453v1	28894102	-
Aeromonas hydrophila subsp. ranae	208958	PRJEB7049	267820	Proteobacteria	Gammaproteobacteria	4.68256	61.6	-	CDDC01	107	4400	4124	11/24/14	4/3/17	Scaffold	UCONNMISEQ	SAMEA2752399	GCA_000820325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/325/GCA_000820325.1_PRJEB7049	-	CIP 107985
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.24274	67.4	-	LOVN01	94	6515	6151	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449204	GCA_001525745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/745/GCA_001525745.1_ASM152574v1	-	MSMB1185
Flavobacterium psychrophilum	96345	PRJEB21067	396411	FCB group	Bacteroidetes/Chlorobi group	2.51455	32.5	-	FYCQ01	202	2253	2188	7/29/17	8/7/17	Contig	INRA	SAMEA104125758	GCA_900186605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/605/GCA_900186605.1_KU061128-1_V1	-	KU 061128-1
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.74035	47.6	-	MEAI01	88	3460	3278	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320410	GCA_001883485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/485/GCA_001883485.1_ASM188348v1	-	02/0981-4br
Lactobacillus helveticus	1587	PRJNA266376	266376	Terrabacteria group	Firmicutes	2.10663	36.8859	chromosome:NZ_CP009907.1/CP009907.1; plasmid unnamed:NZ_CP009908.1/CP009908.1	-	2	2172	1740	3/24/15	4/3/17	Complete Genome	Northeast Agricultural University	SAMN03164100	GCA_000961015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/015/GCA_000961015.1_ASM96101v1	-	KLDS1.8701
Lactobacillus crispatus	47770	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.04966	36.8	-	LYRO01	69	2102	1895	7/14/17	7/17/17	Scaffold	University of Minnesota	SAMN04498997	GCA_002219055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/219/055/GCA_002219055.1_ASM221905v1	-	UMNLC25
Gardnerella vaginalis	2702	PRJNA316969	316969	Terrabacteria group	Actinobacteria	1.5952	41.9	-	LWSQ01	302	1360	1185	6/9/16	4/5/17	Scaffold	Loyola University Chicago	SAMN04625558	GCA_001660735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/735/GCA_001660735.1_ASM166073v1	-	23-12
Lactobacillus paracasei	1597	PRJNA383564	383564	Terrabacteria group	Firmicutes	3.20143	46.1	-	NDXH01	127	3424	3099	4/28/17	5/3/17	Contig	Brigham Young University	SAMN06767179	GCA_002115655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/655/GCA_002115655.1_ASM211565v1	-	DmW_181
Streptococcus oralis subsp. oralis	1891914	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.93685	41.4	-	NCUM01	7	1894	1793	4/18/17	4/21/17	Contig	Slagelse Hospital	SAMN06705622	GCA_002096525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/525/GCA_002096525.1_ASM209652v1	27325438	RH_34706_11
Acinetobacter nosocomialis	106654	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.97653	38.6	-	DDBC01	49	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456967	GCA_002333365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/365/GCA_002333365.1_ASM233336v1	28894102	-
Klebsiella variicola	244366	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.46937	57.6	-	JVXL01	301	5446	5164	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197205	GCA_001068855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/855/GCA_001068855.1_ASM106885v1	26230489	124_ECLO
Pseudoalteromonas sp. NBT06-2	2025950	PRJNA397862	397862	Proteobacteria	Gammaproteobacteria	5.77453	34.8	-	NQMR01	462	5202	4756	8/28/17	8/30/17	Contig	Shanghai Ocean University	SAMN07490266	GCA_002276045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/045/GCA_002276045.1_ASM227604v1	-	NBT06-2
Enterococcus hirae ATCC 9790	768486	PRJNA49385	49385	Terrabacteria group	Firmicutes	2.85644	36.8638	chromosome:NC_018081.1/CP003504.1; plasmid pTG9790:NC_015845.1/HQ724512.1	-	2	2745	2482	6/20/12	3/30/17	Complete Genome	University of Bern	SAMN02604142	GCA_000271405.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/405/GCA_000271405.2_ASM27140v2	22933757	ATCC 9790
Enterobacter asburiae	61645	PRJNA299023	299023	Proteobacteria	Gammaproteobacteria	4.5887	55.9	-	LZCS01	22	4441	4272	6/10/16	4/5/17	Scaffold	Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion	SAMN04481089	GCA_001661155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/661/155/GCA_001661155.1_ASM166115v1	-	EA_75
Pseudomonas amygdali pv. mori str. 301020	629261	PRJNA33207	33207	Proteobacteria	Gammaproteobacteria	6.50603	57.5	-	AEAG01	2281	7573	7544	7/8/10	1/8/14	Scaffold	University of North Carolina at Chapel Hill	SAMN02471311	GCA_000145765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/765/GCA_000145765.1_ASM14576v1	21799664	301020
Acinetobacter pittii	48296	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.88935	38.8	-	LLCZ01	26	3775	3618	11/5/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145630	GCA_001432835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/835/GCA_001432835.1_ASM143283v1	-	ABBL019
Citrobacter freundii	546	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.55288	51.8	-	LJET02	263	5671	5285	10/15/15	4/5/17	Contig	University of KwaZulu Natal	SAMN04011453	GCA_001317155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/155/GCA_001317155.2_ASM131715v2	-	953086287
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.97558	55.1	-	JZZL01	70	4942	4700	3/19/15	3/25/17	Contig	JCVI	SAMN03283640	GCA_000956935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/935/GCA_000956935.1_ASM95693v1	-	35036
Kingella kingae KK98	1348243	PRJEB4191	209621	Proteobacteria	Betaproteobacteria	1.99292	46.6	-	CBRU01	1	-	-	8/28/13	1/30/15	Scaffold	URMITE	SAMEA2272124	GCA_000470435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/435/GCA_000470435.1_G99	-	KK98
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.08089	55.1	-	LDBW01	65	5040	4783	5/21/15	4/6/17	Contig	JCVI	SAMN03495959	GCA_001011335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/335/GCA_001011335.1_ASM101133v1	-	GN04690
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.95702	64.1	-	FSFT01	24	4922	4777	12/14/16	3/21/17	Contig	SC	SAMEA2069146	GCA_900134995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/995/GCA_900134995.1_10208_3_40	-	465
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.73393	66.5	-	LOUD01	133	8109	7667	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449165	GCA_001525925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/925/GCA_001525925.1_ASM152592v1	-	INT3-BP105
Streptococcus sobrinus	1310	PRJNA270153	270153	Terrabacteria group	Firmicutes	2.19811	43.4	-	NPOU01	4	2132	1938	8/23/17	8/25/17	Contig	Chosun University	SAMN03263586	GCA_002266475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/475/GCA_002266475.1_ASM226647v1	-	KCOM 1157
Pseudomonas sp. URMO17WK12:I11	1283291	PRJNA186473	186473	Proteobacteria	Gammaproteobacteria	4.69321	61.9	-	AZVN01	33	4309	4161	1/3/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02597218	GCA_000514235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/235/GCA_000514235.1_ASM51423v1	-	URMO17WK12:I11
Streptomyces sp. ATexAB-D23	1157635	PRJNA169754	169754	Terrabacteria group	Actinobacteria	7.94848	71.7	-	AREH01	89	6980	6652	4/19/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02441037	GCA_000373645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/645/GCA_000373645.1_ASM37364v1	-	ATexAB-D23
Acinetobacter sp. NIPH 2036	1217696	PRJNA183245	183245	Proteobacteria	Gammaproteobacteria	3.89768	41.3	-	ATGK01	11	3683	3461	6/21/13	4/6/17	Scaffold	Broad Institute	SAMN01087860	GCA_000413935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/935/GCA_000413935.1_Acin_sp_NIPH_2036_V1	-	NIPH 2036
Flavobacterium sp. 38-13	1896168	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	3.80114	37.9	-	MKVG01	23	3479	3391	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660601	GCA_001899155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/155/GCA_001899155.1_ASM189915v1	-	-
Klebsiella sp. NFIX35	1566161	PRJEB17117	351331	Proteobacteria	Gammaproteobacteria	5.28824	58.1	-	FOUW01	23	5225	4975	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159397	GCA_900114985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/985/GCA_900114985.1_IMG-taxon_2600255302_annotated_assembly	-	NFIX35
Bacillus sp. UNC125MFCrub1.1	1380371	PRJNA213759	213759	Terrabacteria group	Firmicutes	3.71815	41.4	-	JNIG01	15	3881	3757	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841139	GCA_000701305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/305/GCA_000701305.1_ASM70130v1	-	UNC125MFCrub1.1
Clostridium sp. LF2	1499689	PRJEB6483	251839	Terrabacteria group	Firmicutes	3.75022	30.6	-	CCFK01	15	3517	3308	9/6/14	4/9/17	Contig	URMITE	SAMEA2602741	GCA_000753435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/435/GCA_000753435.1_Clostridium_amazonitimonense	-	-
Sphingomonas sp. SRS2	133190	PRJNA279931	279931	Proteobacteria	Alphaproteobacteria	4.63149	63.9	-	LARW01	168	4663	4419	4/8/15	4/17/17	Contig	"ENVS, Aarhus University"	SAMN03452277	GCA_000971055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/055/GCA_000971055.1_SRS2_1.0	26021936	SRS2
Synechococcus sp. BO 8801	169670	PRJNA396543	396543	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.27118	69.2	-	NQKY01	47	3270	3117	8/15/17	8/17/17	Scaffold	University of Bristol	SAMN07427895	GCA_002252675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/675/GCA_002252675.1_ASM225267v1	-	BO 8801
Rhodococcus sp. D-1	1912238	PRJNA350241	350241	Terrabacteria group	Actinobacteria	6.93433	62.3	-	MNPP01	57	6535	6356	1/31/17	4/17/17	Contig	institute of microbiology	SAMN05935552	GCA_001976025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/025/GCA_001976025.1_ASM197602v1	-	D-1
Enterobacter sp. MGH127	1686393	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.97789	54.9	-	LETI01	8	4852	4604	6/19/15	4/3/17	Scaffold	Broad Institute	SAMN03280185	GCA_001037735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/735/GCA_001037735.1_Ente_cloa_complex_MGH127_V1	-	MGH127
Staphylococcus sp. HMSC055H04	1739323	PRJNA299973	299973	Terrabacteria group	Firmicutes	2.83784	32.6	-	LTFK01	81	2972	2858	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477633	GCA_001811775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/775/GCA_001811775.1_ASM181177v1	-	HMSC055H04
Corynebacterium sp. HMSC077G07	1715042	PRJNA296169	296169	Terrabacteria group	Actinobacteria	2.43057	58.8	-	LTKD01	37	2142	2056	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04495789	GCA_001809225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/225/GCA_001809225.1_ASM180922v1	-	HMSC077G07
Arthrobacter sp. AK-YN10	1349820	PRJNA209398	209398	Terrabacteria group	Actinobacteria	4.43454	63.3	-	AVPD02	464	4407	3887	9/11/13	4/10/17	Contig	National Environmental Engineering Research Institute	SAMN02470623	GCA_000465895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/895/GCA_000465895.2_ASM46589v2	24407646	AK-YN10
Bradyrhizobium sp. 2(2017)	1404768	PRJNA397110	397110	Proteobacteria	Alphaproteobacteria	7.06834	64.7	-	NPNZ01	37	6642	6436	8/22/17	8/24/17	Contig	Ottawa Research and Development Center	SAMN07448754	GCA_002266435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/435/GCA_002266435.1_ASM226643v1	-	39S1MB
Streptococcus sp. HMSC034E03	1739309	PRJNA299959	299959	Terrabacteria group	Firmicutes	2.11151	39.4	-	LTFY01	97	2085	1909	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477621	GCA_001811505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/505/GCA_001811505.1_ASM181150v1	-	HMSC034E03
Mycobacterium sp. H003	1720569	PRJNA294421	294421	Terrabacteria group	Actinobacteria	5.58846	63.9	-	LJYL01	35	5577	5359	11/6/15	4/11/17	Contig	US EPA	SAMN04091147	GCA_001440135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/135/GCA_001440135.1_ASM144013v1	26798093	H003
Prevotella sp. BP1-145	645273	PRJEB16250	348886	FCB group	Bacteroidetes/Chlorobi group	3.55296	48.4	-	FNIW01	50	2897	2768	10/20/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487900	GCA_900104295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/295/GCA_900104295.1_IMG-taxon_2623620512_annotated_assembly	-	BP1-145
Enterococcus sp. 1140_ESPC	1579349	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.71374	37.6	-	JWBQ01	75	2690	2595	7/10/15	4/10/17	Contig	University of Washington	SAMN03197096	GCA_001053935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/935/GCA_001053935.1_ASM105393v1	26230489	1140_ESPC
Treponema sp. UBA4326	1947726	PRJNA348753	348753	Spirochaetes	Spirochaetia	2.97763	44.1	-	DGTW01	373	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453632	GCA_002393835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/835/GCA_002393835.1_ASM239383v1	28894102	-
Methylobacterium sp. CCH5-D2	1768765	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	6.24009	71	-	LSIX01	1165	6191	5516	2/10/16	4/12/17	Contig	Georgia Institute of Technology	SAMN04299448	GCA_001556475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/475/GCA_001556475.1_ASM155647v1	-	CCH5-D2
uncultured Eubacterium sp.	165185	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.02729	34	-	FMHC01	26	2758	2709	8/16/16	8/16/16	Scaffold	SC	SAMEA3545227	GCA_900066105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/105/GCA_900066105.1_13414_6_2	-	-
Paenibacillus sp. 1-18	1333846	PRJNA202956	202956	Terrabacteria group	Firmicutes	5.40155	46	-	ASSB01	408	5146	4472	1/15/14	4/9/17	Contig	China Agricultural University	SAMN02597338	GCA_000520755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/755/GCA_000520755.1_s118	-	18-Jan
Alcanivorax sp. UBA4527	1945991	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.98139	63.2	-	DGMD01	318	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456085	GCA_002388265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/265/GCA_002388265.1_ASM238826v1	28894102	-
Ruminococcus sp. UBA1780	1947406	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.9002	41.8	-	DCGK01	141	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06457766	GCA_002315235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/235/GCA_002315235.1_ASM231523v1	28894102	-
Thioalkalivibrio sp. ALM2T	1158184	PRJNA183050	183050	Proteobacteria	Gammaproteobacteria	2.92411	65.9	-	ARLZ01	26	2833	2668	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441657	GCA_000381505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/505/GCA_000381505.1_ASM38150v1	-	ALM2T
Bacteroides sp. CAG:702	1262747	PRJEB983	206721	FCB group	Bacteroidetes/Chlorobi group	3.43389	45.8	-	CBAM01	157	2891	2855	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138522	GCA_000432695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/695/GCA_000432695.1_MGS702	-	-
Prochlorococcus sp. scB241_528P14	1471460	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.10413	31.1	-	JFLK01	281	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671331	GCA_000634135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/135/GCA_000634135.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. BCW_6468	1903585	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.74597	30.4	-	MJXQ01	44	1800	1635	10/4/16	4/13/17	Scaffold	University of California at Davis	SAMN03360177	GCA_001762865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/865/GCA_001762865.1_ASM176286v1	-	BCW_6468
Neisseria sp. HMSC066F04	1715148	PRJNA296276	296276	Proteobacteria	Betaproteobacteria	2.21715	48.9	-	LTPI01	53	2145	2014	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498639	GCA_001837365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/365/GCA_001837365.1_ASM183736v1	-	HMSC066F04
Rhizobium sp. LC145	1120688	PRJNA281579	281579	Proteobacteria	Alphaproteobacteria	5.88027	61.4	-	LBHV01	35	5856	5672	5/11/15	4/10/17	Contig	Monash University Malaysia	SAMN03491939	GCA_001005825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/825/GCA_001005825.1_ASM100582v1	-	LC145
Halomonas sp. UBA3980	1946586	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.08931	55.1	-	DGCK01	237	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454236	GCA_002384585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/585/GCA_002384585.1_ASM238458v1	28894102	-
Chryseobacterium sp. RU37D	1907397	PRJEB18865	360722	FCB group	Bacteroidetes/Chlorobi group	3.07195	35	-	FTMM01	64	2789	2650	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05880574	GCA_900156075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/075/GCA_900156075.1_IMG-taxon_2708742463_annotated_assembly	-	RU37D
Mesorhizobium sp. LSJC269B00	1287326	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.55906	62.5	-	AYVN01	46	6473	6001	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359693	GCA_000502815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/815/GCA_000502815.1_Mloti_LSJC269B00	-	LSJC269B00
Xanthomonas translucens	343	PRJNA302486	302486	Proteobacteria	Gammaproteobacteria	5.71154	68	-	LNVW01	140	-	-	12/8/15	12/8/15	Scaffold	Kansas State University	SAMN04279066	GCA_001462125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/125/GCA_001462125.1_ASM146212v1	-	XT8
Microbacterium sp. Leaf151	1736276	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.6096	69.8	-	LMOR01	7	3325	3219	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151656	GCA_001424225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/225/GCA_001424225.1_Leaf151	26633631	Leaf151
Ruegeria mobilis	379347	PRJEB16553	349839	Proteobacteria	Alphaproteobacteria	4.71365	59	-	FNNK01	37	4484	4355	10/22/16	4/5/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444385	GCA_900106635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/635/GCA_900106635.1_IMG-taxon_2693429875_annotated_assembly	-	DSM 23403
Sphingopyxis sp. RIFCSPHIGHO2_12_FULL_65_19	1802172	PRJNA288027	288027	Proteobacteria	Alphaproteobacteria	3.87423	64.5	-	MIAM01	73	3750	3514	10/21/16	10/24/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04315629	GCA_001830555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/555/GCA_001830555.1_ASM183055v1	27774985	-
Bacillus velezensis	492670	PRJNA267587	267587	Terrabacteria group	Firmicutes	3.88892	46.4	-	JTKJ02	18	3852	3671	3/23/15	3/22/17	Contig	NCAUR-ARS-USDA	SAMN03198508	GCA_000960265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/265/GCA_000960265.2_ASM96026v2	25835027	KACC 13105
Gilliamella apicola	1196095	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	3.14452	33.6	-	MZNE01	157	2875	2734	5/16/17	5/23/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603510	GCA_002141515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/515/GCA_002141515.1_ASM214151v1	-	A-1-24
Klebsiella michiganensis	1134687	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.88434	55.3	-	JUZM01	567	5788	5298	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197828	GCA_001065705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/705/GCA_001065705.1_ASM106570v1	26230489	628_KOXY
Achromobacter sp. 2789STDY5608608	1806476	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	6.24525	67.8	-	CYTG01	48	5700	5493	9/19/15	4/11/17	Scaffold	SC	SAMEA2247573	GCA_001299395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/395/GCA_001299395.1_11861_6_3	-	2789STDY5608608
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.54648	50.9	-	MPRN01	73	2506	2417	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016285	GCA_002021115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/115/GCA_002021115.1_ASM202111v1	-	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJNA322421	322421	Proteobacteria	Gammaproteobacteria	5.71625	57.3	-	LYWO01	74	5747	5478	8/9/16	2/21/17	Scaffold	Zhejiang university	SAMN05170810	GCA_001701635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/635/GCA_001701635.1_ASM170163v1	-	SKLX2736
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.77235	32.3	-	FQMV01	14	2777	2593	11/24/16	4/6/17	Contig	SC	SAMEA3449139	GCA_900127055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/055/GCA_900127055.1_17175_3_83	-	3688STDY6125137
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.53441	67.7	-	LPMB01	86	6852	6493	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449661	GCA_001533815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/815/GCA_001533815.1_ASM153381v1	-	MSMB800WGS
Xanthomonas axonopodis pv. manihotis str. UG23	1185707	PRJNA163809	163809	Proteobacteria	Gammaproteobacteria	4.92406	65	-	AKEV01	133	4395	4071	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090352	GCA_000266465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/465/GCA_000266465.1_UG23	22699502	UG23
Xanthomonas axonopodis pv. manihotis str. UG24	1185708	PRJNA163811	163811	Proteobacteria	Gammaproteobacteria	4.90991	65	-	AKEW01	145	4368	4035	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090353	GCA_000266485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/485/GCA_000266485.1_UG24	22699502	UG24
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.53572	67.7	-	LPMC01	86	6849	6493	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449662	GCA_001533845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/845/GCA_001533845.1_ASM153384v1	-	MSMB802WGS
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.71492	32.3	-	FQMX01	10	2681	2521	11/24/16	4/5/17	Contig	SC	SAMEA3449141	GCA_900127065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/065/GCA_900127065.1_17175_3_85	-	3688STDY6125139
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJNA322421	322421	Proteobacteria	Gammaproteobacteria	5.32557	57.9	-	LYWP01	38	5322	5060	8/9/16	2/21/17	Scaffold	Zhejiang university	SAMN05170868	GCA_001701645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/645/GCA_001701645.1_ASM170164v1	-	SKLX2781
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.55848	50.8	-	MPRQ01	74	2509	2426	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016288	GCA_002021155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/155/GCA_002021155.1_ASM202115v1	-	-
Achromobacter sp. 2789STDY5663429	1806474	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	6.42547	67.8	-	CYTZ01	23	5879	5710	9/19/15	4/11/17	Scaffold	SC	SAMEA2258936	GCA_001299415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/415/GCA_001299415.1_11861_6_70	-	2789STDY5663429
Klebsiella michiganensis	1134687	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.01743	55.5	-	JUZE01	275	5851	5538	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197836	GCA_001065765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/765/GCA_001065765.1_ASM106576v1	26230489	636_KOXY
Gilliamella apicola	1196095	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	3.04652	33.5	-	MZNG01	226	2725	2568	5/16/17	5/23/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603512	GCA_002141555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/555/GCA_002141555.1_ASM214155v1	-	A8
Bacillus velezensis	492670	PRJNA289327	289327	Terrabacteria group	Firmicutes	3.8614	46.6	-	LGAU01	24	3815	3637	8/12/15	3/22/17	Contig	University Laval	SAMN03852608	GCA_001266815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/815/GCA_001266815.1_ASM126681v1	26450741	OB9
Sphingopyxis sp. 65-8	1895852	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	3.29116	64.7	-	MKUC01	103	3311	2742	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660571	GCA_001898555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/555/GCA_001898555.1_ASM189855v1	-	-
Ruegeria mobilis	379347	PRJNA242743	242743	Proteobacteria	Alphaproteobacteria	6.30244	59.3	-	LNWH01	2955	-	-	7/7/16	7/7/16	Contig	Technical University of Denmark	SAMN03339844	GCA_001681365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/365/GCA_001681365.1_ASM168136v1	-	F3183
Microbacterium sp. Leaf436	1736377	PRJNA297956	297956	Terrabacteria group	Actinobacteria	3.36754	70.6	-	LMRB01	6	3169	3078	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151767	GCA_001424715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/715/GCA_001424715.1_Leaf436	26633631	Leaf436
Xanthomonas translucens pv. translucens	134875	PRJNA319538	319538	Proteobacteria	Gammaproteobacteria	4.51974	67.6	-	LWSV01	801	3888	3239	6/8/16	6/8/16	Scaffold	The Connecticut Agricultural Experiment Station	SAMN04893624	GCA_001659915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/915/GCA_001659915.1_ASM165991v1	-	UPB458
Mesorhizobium sp. LSJC280B00	1287336	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	7.02701	62.1	-	AYVL01	120	7063	6374	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359695	GCA_000502835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/835/GCA_000502835.1_Mloti_LSJC280B00	-	LSJC280B00
Chryseobacterium sp. YR221	1500293	PRJEB20322	382108	FCB group	Bacteroidetes/Chlorobi group	5.01429	36.4	-	FWXM01	16	4445	4351	4/8/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02787074	GCA_900176315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/315/GCA_900176315.1_IMG-taxon_2588254255_annotated_assembly	-	YR221
Rhizobium sp. AAP116	1523429	PRJNA255568	255568	Proteobacteria	Alphaproteobacteria	4.57854	61.4	-	LJIB01	44	4384	4276	9/22/15	4/11/17	Contig	"Institute of Microbiology, ASCR"	SAMN02927149	GCA_001295785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/785/GCA_001295785.1_ASM129578v1	-	AAP116
Neisseria sp. HMSC066H01	1715031	PRJNA296158	296158	Proteobacteria	Betaproteobacteria	2.14724	49.6	-	LTPH01	28	2067	1947	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498571	GCA_001837375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/375/GCA_001837375.1_ASM183737v1	-	HMSC066H01
Campylobacter sp. BCW_4321	1903586	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.84011	30.1	-	MJYA01	67	1930	1768	10/4/16	4/13/17	Scaffold	University of California at Davis	SAMN03358048	GCA_001763075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/075/GCA_001763075.1_ASM176307v1	-	BCW_4321
Prochlorococcus sp. scB241_529C4	1471463	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.60681	31.3	-	JFLN01	187	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671334	GCA_000634155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/155/GCA_000634155.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Bacteroides sp. CAG:443	1262739	PRJEB883	206830	FCB group	Bacteroidetes/Chlorobi group	3.39523	43.4	-	CBEN01	106	2757	2710	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138524	GCA_000432735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/735/GCA_000432735.1_MGS443	-	-
Thioalkalivibrio sp. AKL7	1158155	PRJNA185214	185214	Proteobacteria	Gammaproteobacteria	2.87411	66.3	-	ARMJ01	20	2786	2658	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441327	GCA_000381705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/705/GCA_000381705.1_ASM38170v1	-	AKL7
Alcanivorax sp. UBA4521	1945990	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.9242	63.5	-	DGMJ01	206	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456083	GCA_002388345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/345/GCA_002388345.1_ASM238834v1	28894102	-
Paenibacillus sp. 1-49	1155954	PRJNA202959	202959	Terrabacteria group	Firmicutes	5.618	46.8	-	ASRY01	350	5293	4770	1/15/14	4/9/17	Contig	China Agricultural University	SAMN02597335	GCA_000520815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/815/GCA_000520815.1_s149	-	Jan-49
uncultured Eubacterium sp.	165185	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.4169	38.4	-	FMEO01	58	3066	3000	8/16/16	8/16/16	Scaffold	SC	SAMEA3545253	GCA_900066175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/175/GCA_900066175.1_13414_6_29	-	-
Methylobacterium sp. CCH7-A2	1768789	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	5.15706	67.5	-	LSKN01	331	4957	4736	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299490	GCA_001557075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/075/GCA_001557075.1_ASM155707v1	-	CCH7-A2
Treponema sp. UBA4319	1947725	PRJNA348753	348753	Spirochaetes	Spirochaetia	2.75557	57.1	-	DGUD01	225	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453094	GCA_002393865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/865/GCA_002393865.1_ASM239386v1	28894102	-
Enterococcus sp. RIT-PI-f	1690244	PRJNA290677	290677	Terrabacteria group	Firmicutes	3.22157	41.6	-	LHOX01	25	3089	2958	9/22/15	4/11/17	Contig	Monash University Malaysia	SAMN03894454	GCA_001297065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/065/GCA_001297065.1_ASM129706v1	26586879	RIT-PI-f
Prevotella sp. tc2-28	1761888	PRJEB16650	349913	FCB group	Bacteroidetes/Chlorobi group	3.37112	48.3	-	FNRE01	36	2885	2778	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487851	GCA_900107705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/705/GCA_900107705.1_IMG-taxon_2623620552_annotated_assembly	-	TC2-28
Mycobacterium sp. H063	1720570	PRJNA294421	294421	Terrabacteria group	Actinobacteria	5.73925	63.9	-	LJYM01	67	5749	5497	11/6/15	4/11/17	Contig	US EPA	SAMN04091148	GCA_001440155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/155/GCA_001440155.1_ASM144015v1	-	H063
Streptococcus sp. HMSC070A10	1739321	PRJNA299971	299971	Terrabacteria group	Firmicutes	2.02942	35.2	-	LTFM01	30	2060	1971	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477631	GCA_001811745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/745/GCA_001811745.1_ASM181174v1	-	HMSC070A10
Bradyrhizobium sp. 3(2017)	1404367	PRJNA397108	397108	Proteobacteria	Alphaproteobacteria	7.03705	64.3	-	NQFN01	24	6674	6408	8/23/17	8/25/17	Contig	Ottawa Research and Development Center	SAMN07448748	GCA_002266465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/465/GCA_002266465.1_ASM226646v1	-	85S1MB
Arthrobacter sp. 31Y	1115632	PRJNA195712	195712	Terrabacteria group	Actinobacteria	5.07955	61.9	-	JAFW01	2	4722	4549	1/14/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02584931	GCA_000526335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/335/GCA_000526335.1_ASM52633v1	-	31Y
Corynebacterium sp. HMSC072A04	1715045	PRJNA296172	296172	Terrabacteria group	Actinobacteria	2.80442	61.1	-	LTKC01	97	2664	2516	10/17/16	4/17/17	Scaffold	The Genome Institute at Washington University	SAMN04495792	GCA_001809235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/235/GCA_001809235.1_ASM180923v1	-	HMSC072A04
Staphylococcus sp. HMSC065C10	1739325	PRJNA299975	299975	Terrabacteria group	Firmicutes	2.36	32.5	-	LTFI01	73	2327	2189	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477634	GCA_001811815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/815/GCA_001811815.1_ASM181181v1	-	HMSC065C10
Enterobacter sp. MGH128	1686394	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.88406	55	-	LETJ01	6	4781	4524	6/19/15	4/10/17	Scaffold	Broad Institute	SAMN03280186	GCA_001037745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/745/GCA_001037745.1_Ente_cloa_complex_MGH128_V1	-	MGH128
Rhodococcus sp. 1168	2018041	PRJNA344850	344850	Terrabacteria group	Actinobacteria	5.06479	62.1	-	MKKY01	97	4693	4452	4/13/17	7/11/17	Contig	University of Tasmania	SAMN05846348	GCA_002091955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/955/GCA_002091955.1_ASM209195v1	-	1168
Synechococcus sp. LL	2025607	PRJNA396543	396543	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.54888	68.4	-	NQLA01	160	3564	3382	8/15/17	8/17/17	Scaffold	University of Bristol	SAMN07427899	GCA_002252705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/705/GCA_002252705.1_ASM225270v1	-	LL
Sphingomonas sp. Ag1	1642949	PRJNA281229	281229	Proteobacteria	Alphaproteobacteria	3.93395	66	-	LAZX01	94	3814	3628	4/24/15	4/10/17	Contig	New Mexico State University	SAMN03486495	GCA_000980895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/895/GCA_000980895.1_ASM98089v1	-	Ag1
Clostridium sp. CL-2	1499684	PRJEB6475	251853	Terrabacteria group	Firmicutes	4.05889	29.2	-	CCNP01	26	3867	3674	9/6/14	4/9/17	Contig	URMITE	SAMEA2697682	GCA_000753455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/455/GCA_000753455.1_Clostridium_jeddahtimonense	-	-
Bacillus sp. MB2021	1408303	PRJNA223041	223041	Terrabacteria group	Firmicutes	5.03535	35.2	-	JNJJ01	166	4878	4630	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841167	GCA_000701605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/605/GCA_000701605.1_ASM70160v1	-	MB2021
Klebsiella sp. NFIX38	1566158	PRJEB17281	351467	Proteobacteria	Gammaproteobacteria	5.28468	58.1	-	FOWU01	19	5222	4977	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159330	GCA_900115525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/525/GCA_900115525.1_IMG-taxon_2603880202_annotated_assembly	-	NFIX38
Flavobacterium sp. BFFFF1	2015557	PRJNA340070	340070	FCB group	Bacteroidetes/Chlorobi group	3.77125	43.4	-	NKJE01	68	3346	3257	8/16/17	8/16/17	Scaffold	CNRS-AMU	SAMN07280663	GCA_002256285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/285/GCA_002256285.1_ASM225628v1	-	-
Acinetobacter sp. UNC436CL71CviS28	1380368	PRJNA213756	213756	Proteobacteria	Gammaproteobacteria	3.22656	41.6	-	JIBB01	103	3147	2895	4/8/14	4/6/17	Scaffold	DOE Joint Genome Institute	SAMN02743943	GCA_000620525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/525/GCA_000620525.1_ASM62052v1	-	UNC436CL71CviS28
Streptomyces sp. BoleA5	1157637	PRJNA169757	169757	Terrabacteria group	Actinobacteria	8.64687	72.3	-	AREI01	67	8002	7495	4/19/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02441703	GCA_000373665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/665/GCA_000373665.1_ASM37366v1	-	BoleA5
Pseudomonas sp. URMO17WK12:I3	1283289	PRJNA186470	186470	Proteobacteria	Gammaproteobacteria	4.95227	63.6	-	AZVO01	17	4573	4458	1/3/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02597219	GCA_000514255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/255/GCA_000514255.1_ASM51425v1	-	URMO17WK12:I3
Streptococcus sobrinus TCI-194	1074150	PRJNA72043	72043	Terrabacteria group	Firmicutes	2.1221	43.5	-	AGHS01	854	-	-	10/6/11	12/5/13	Contig	JCVI	SAMN02436528	GCA_000228645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/228/645/GCA_000228645.2_SMUT5-NEX_78-194	-	TCI-194
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.73183	66.5	-	LOUG01	122	8118	7664	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449168	GCA_001525945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/945/GCA_001525945.1_ASM152594v1	-	INT3-BP109
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.91429	64.1	-	FSGJ01	16	4839	4705	12/14/16	3/21/17	Contig	SC	SAMEA2071186	GCA_900135225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/225/GCA_900135225.1_10625_4_37	-	37
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.9437	55.2	-	LDBR01	49	4855	4638	5/21/15	4/6/17	Contig	JCVI	SAMN03495954	GCA_001011355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/355/GCA_001011355.1_ASM101135v1	-	GN03543
Kingella kingae KK190	1305779	PRJEB1631	194501	Proteobacteria	Betaproteobacteria	1.99284	46.6	-	CBTE01	1	-	-	9/12/13	1/30/15	Scaffold	URMITE	SAMEA2272399	GCA_000470555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/555/GCA_000470555.1_KK190	-	KK190
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.02899	55.1	-	JZZH01	94	4928	4700	3/19/15	3/25/17	Contig	JCVI	SAMN03283665	GCA_000956985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/985/GCA_000956985.1_ASM95698v1	-	35638
Citrobacter freundii	546	PRJNA252011	252011	Proteobacteria	Gammaproteobacteria	5.25209	51.5	-	JRST01	47	5267	4987	10/26/15	4/4/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02872722	GCA_001412715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/715/GCA_001412715.1_AssemblyName	25501822	RU2
Acinetobacter pittii	48296	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.1435	38.8	-	LLDL01	83	4157	3880	11/5/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145642	GCA_001432935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/935/GCA_001432935.1_ASM143293v1	-	ABBL031
Pseudomonas amygdali pv. eriobotryae	129137	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	6.16095	57.7	-	LJQI01	440	5922	5922	10/20/15	10/20/15	Scaffold	University of Toronto	SAMN03976280	GCA_001400455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/455/GCA_001400455.1_PerICMP4455	-	ICMP4455
Enterobacter asburiae	61645	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.45632	54.9	-	BEEV01	225	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089475	GCA_002333885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/885/GCA_002333885.1_ASM233388v1	-	TUM10682
Chlamydia avium 10DC88	1229831	PRJNA209934	209934	PVC group	Chlamydiae	1.04827	36.8614	chromosome Chlamydia_sp_10DC88:NZ_CP006571.1/CP006571.1; plasmid p10DC88:NZ_CP006572.1/CP006572.1	-	2	963	847	3/3/14	4/9/17	Complete Genome	Friedrich-Loeffler-Institut	SAMN02216823	GCA_000583875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/875/GCA_000583875.1_ASM58387v1	24461712	10DC88
Pseudoalteromonas sp. JB197	1434839	PRJNA387187	387187	Proteobacteria	Gammaproteobacteria	4.1616	40.1	-	NRGZ01	12	3817	3532	9/21/17	9/23/17	Contig	"Dutton Lab, UCSD"	SAMN07141177	GCA_002332205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/205/GCA_002332205.1_ASM233220v1	28644126	JB197
Klebsiella variicola	244366	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.79468	57.2	-	JVTE01	230	5810	5499	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197316	GCA_001076365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/365/GCA_001076365.1_ASM107636v1	26230489	1335_KPNE
Streptococcus oralis subsp. oralis	1891914	PRJNA304678	304678	Terrabacteria group	Firmicutes	2.00468	41	-	NCUN01	11	1943	1848	4/18/17	4/21/17	Contig	Slagelse Hospital	SAMN06705621	GCA_002096535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/535/GCA_002096535.1_ASM209653v1	27325438	RH_1735_08
Lactobacillus paracasei	1597	PRJNA361077	361077	Terrabacteria group	Firmicutes	3.09527	46.3	-	NCSO01	49	3236	2951	5/18/17	5/24/17	Contig	"Teagasc, Moorepark"	SAMN06220137	GCA_002148805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/805/GCA_002148805.1_ASM214880v1	-	DPC4206
Gardnerella vaginalis	2702	PRJNA316969	316969	Terrabacteria group	Actinobacteria	1.62283	42.3	-	LWSP01	324	1399	1188	6/9/16	4/5/17	Scaffold	Loyola University Chicago	SAMN04625602	GCA_001660755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/755/GCA_001660755.1_ASM166075v1	-	18-4
Lactobacillus crispatus	47770	PRJNA312549	312549	Terrabacteria group	Firmicutes	2.04244	36.8	-	LYRM01	63	2080	1888	7/14/17	7/17/17	Scaffold	University of Minnesota	SAMN04498995	GCA_002219085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/219/085/GCA_002219085.1_ASM221908v1	-	UMNLC23
Pectobacterium carotovorum subsp. carotovorum WPP14	558270	PRJNA31123	31123	Proteobacteria	Gammaproteobacteria	4.82319	52	-	ABVY01	741	-	-	9/9/08	1/8/14	Contig	University of Wisconsin	SAMN02472006	GCA_000173155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/155/GCA_000173155.1_ASM17315v1	18986251	WPP14
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.76002	47.6	-	MEAJ01	82	3476	3303	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320411	GCA_001883495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/495/GCA_001883495.1_ASM188349v1	-	Feb-68
Flavobacterium psychrophilum	96345	PRJEB21067	396411	FCB group	Bacteroidetes/Chlorobi group	2.6943	32.4	-	FYDF01	261	2549	2336	7/29/17	8/7/17	Contig	INRA	SAMEA104126819	GCA_900186645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/645/GCA_900186645.1_LVDJXP189_V1	-	LVDJ XP189
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.67932	67.3	-	LOUY01	106	6978	6634	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449188	GCA_001525845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/845/GCA_001525845.1_ASM152584v1	-	MSMB867
Aeromonas hydrophila	644	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.66846	61.6	-	JVES01	108	4302	4122	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197692	GCA_001055195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/195/GCA_001055195.1_ASM105519v1	26230489	50_AHYD
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.61794	62.7	-	DBFU01	323	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455328	GCA_002295205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/205/GCA_002295205.1_ASM229520v1	28894102	-
Vibrio sp. Vb150	1191786	PRJEB20749	386794	Proteobacteria	Gammaproteobacteria	5.42265	44.6	-	FXUU01	17	4893	4690	5/16/17	5/31/17	Contig	Instituto Superior Tecnico Universidade de Lisboa	SAMEA104054544	GCA_900183395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/395/GCA_900183395.1_ASM90018339v1	-	-
Staphylococcus saprophyticus	29385	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.49965	33	-	DFUH01	14	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455648	GCA_002379645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/645/GCA_002379645.1_ASM237964v1	28894102	-
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.17924	36.8	-	LPSQ01	6	2302	2163	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305178	GCA_001560755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/755/GCA_001560755.1_NG05B_CO5_11	-	NG05B_CO5_11
Bifidobacterium breve MCC 0305	1365961	PRJNA215975	215975	Terrabacteria group	Actinobacteria	2.28684	58.8	-	AWFR01	22	2033	1859	8/11/15	4/3/17	Scaffold	"Food Science and Technology Institute, Morinaga Milk Industry Co., Ltd"	SAMN03978801	GCA_001264035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/035/GCA_001264035.1_ASM126403v1	26236711	MCC 0305
Mycobacterium abscessus 3A-0731	1001718	PRJNA65165	65165	Terrabacteria group	Actinobacteria	5.38696	64.1	-	AKVA01	12	5467	5365	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00672649	GCA_000270705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/705/GCA_000270705.1_ASM27070v1	-	3A-0731
Moraxella catarrhalis	480	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	1.90042	41.5	-	LZDK01	13	1776	1645	7/5/16	4/5/17	Scaffold	TAILORED-Treatment project	SAMN05213996	GCA_001679075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/075/GCA_001679075.1_ASM167907v1	-	CCUG 58286
Lactobacillus salivarius	1624	PRJNA357984	357984	Terrabacteria group	Firmicutes	2.21504	32.5	-	NBEF01	78	2179	2033	4/5/17	4/8/17	Scaffold	University College Cork	SAMN06163268	GCA_002079425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/425/GCA_002079425.1_ASM207942v1	-	JCM 1047
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.70855	56.5	-	MRWZ01	78	4644	4436	3/31/17	4/6/17	Contig	FDA/CFSAN	SAMN06100269	GCA_002075415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/415/GCA_002075415.1_ASM207541v1	-	MOD1-Md5s
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.04827	55.1	-	FLAE01	59	5891	5653	5/19/16	2/21/17	Scaffold	SC	SAMEA2273747	GCA_900083625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/625/GCA_900083625.1_11983_8_83	-	2880STDY5682672
Enterobacter cloacae BWH 43	1439328	PRJNA234121	234121	Proteobacteria	Gammaproteobacteria	5.05461	56.1	-	JMUR01	7	4904	4624	5/19/14	3/24/17	Scaffold	Broad Institute	SAMN02581254	GCA_000692275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/275/GCA_000692275.1_Ente_cloa_BWH_43_V1	-	BWH 43
Proteus mirabilis	584	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.86793	38.6	-	JVWE01	73	3554	3410	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197238	GCA_001060765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/765/GCA_001060765.1_ASM106076v1	26230489	127_PMIR
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.38973	32.7	-	CUHB01	68	2358	2227	3/31/15	3/26/17	Contig	SC	SAMEA1035114	GCA_001231825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/825/GCA_001231825.1_7068_7_57	-	94759
Propionibacterium acnes HL027PA2	765112	PRJNA49259	49259	Terrabacteria group	Actinobacteria	2.47467	60.1	-	ADYT01	16	2495	2343	7/30/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189205	GCA_000144715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/715/GCA_000144715.1_ASM14471v1	-	HL027PA2
Burkholderia sp. RF7-non_BP4	1637848	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.32605	66.5	-	LOTA01	99	6807	6452	1/21/16	4/11/17	Contig	Northern Arizona University	SAMN03449134	GCA_001521935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/935/GCA_001521935.1_ASM152193v1	-	RF7-non_BP4
Campylobacter coli 1891	887294	PRJNA52725	52725	Proteobacteria	delta/epsilon subdivisions	1.49747	31.6	-	AINB01	107	1564	1467	3/16/12	3/15/17	Contig	Cornell University	SAMN02429059	GCA_000253795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/795/GCA_000253795.2_ASM25379v2	-	1891
Mannheimia haemolytica	75985	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.65804	41	-	LQDO01	104	2751	2597	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366510	GCA_001930105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/105/GCA_001930105.1_ASM193010v1	-	232020MH
Lactobacillus plantarum	1590	PRJNA279324	279324	Terrabacteria group	Firmicutes	3.32581	44.4	-	LBHS01	11	3225	3050	5/11/15	3/26/17	Scaffold	"Institute of Biomedical Informatics, National Yang Ming University"	SAMN03445817	GCA_001005805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/805/GCA_001005805.1_ASM100580v1	26279684	PS128
Serratia marcescens EGD-HP20	1357297	PRJNA211617	211617	Proteobacteria	Gammaproteobacteria	5.07762	59.8	-	AVSR01	61	4826	4662	9/11/13	3/27/17	Contig	National Environmental Engineering Research Institute-CSIR	SAMN02469683	GCA_000465615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/615/GCA_000465615.2_GS_De_Novo_Assembly	-	EGD-HP20
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.2859	40.7	-	FPMO01	159	1200	1068	5/10/17	5/24/17	Scaffold	WTSI	SAMEA1903253	GCA_900118985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/985/GCA_900118985.1_9471_4_64	-	162STDY5437297
Leuconostoc mesenteroides subsp. cremoris TIFN8	1234889	PRJNA175676	175676	Terrabacteria group	Firmicutes	1.71009	38.2	-	ATAZ01	173	1722	1452	8/19/13	1/8/14	Contig	Top Institute Food and Nutrition	SAMN02472108	GCA_000447945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/945/GCA_000447945.1_LMT8.01	23823494	TIFN8
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.05356	41.6	-	JJQC01	171	3504	3291	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708966	GCA_000979855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/855/GCA_000979855.1_gtlEnvA5udCFS	25756680	1.F.A.1B.4
Yersinia enterocolitica	630	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	4.5638	47	-	CGBR01	104	4325	4070	3/15/15	3/27/17	Contig	SC	SAMEA1486332	GCA_001354575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/575/GCA_001354575.1_8016_2_65	-	IP26249
Leuconostoc gelidum subsp. gasicomitatum KG16-1	1165892	PRJEB11303	309258	Terrabacteria group	Firmicutes	2.05073	36.8506	chromosome I:NZ_LN890331.1/LN890331.1; plasmid II:NZ_LN890332.1/LN890332.1; plasmid III:NZ_LN890333.1/LN890333.1; plasmid IV:NZ_LN890334.1/LN890334.1	-	4	2077	1944	1/20/16	4/11/17	Complete Genome	UNIVERSITY OF HELSINKI	SAMEA3608619	GCA_001536305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/305/GCA_001536305.1_Leuconostoc_gelidum_subsp._gasicomitatum_KG16-1	-	-
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.43337	53.5	-	MKYK01	42	2387	2194	12/6/16	8/3/17	Contig	Institute for Medical Research	SAMN05877639	GCA_001889825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/825/GCA_001889825.1_ASM188982v1	28254972	rz373
Bordetella bronchiseptica A1-7	1458257	PRJNA237082	237082	Proteobacteria	Betaproteobacteria	5.2652	68.1	-	JGWO01	184	5114	4833	5/12/14	4/2/17	Contig	JCVI	SAMN02614573	GCA_000690335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/335/GCA_000690335.1_gbb60v01	25908122	27-Sep
Bacillus kochii	859143	PRJNA397225	397225	Terrabacteria group	Firmicutes	4.69437	36.8153	chromosome:NZ_CP022983.1/CP022983.1; plasmid pBkBDGP4A:NZ_CP022984.1/CP022984.1	-	2	4716	4430	8/29/17	8/30/17	Complete Genome	Lawrence Berkeley National Laboratory	SAMN07525044	GCA_002276165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/165/GCA_002276165.1_ASM227616v1	-	BDGP4
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31354	57.2358	chromosome 1:NZ_CP018566.1/CP018566.1; chromosome 2:NZ_CP018567.1/CP018567.1	-	2	3371	3149	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932950	GCA_002191815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/815/GCA_002191815.1_ASM219181v1	28388689	BwIM_XXX_22
Lactobacillus rhamnosus	47715	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.03213	46.6	-	JUPX01	248	3048	2836	7/10/15	4/3/17	Contig	University of Washington	SAMN03198077	GCA_001066715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/715/GCA_001066715.1_ASM106671v1	26230489	870_LRHA
Pasteurella multocida subsp. multocida	44283	PRJNA276484	276484	Proteobacteria	Gammaproteobacteria	2.43981	40.2	-	LGRE01	82	2463	2262	11/9/16	4/5/17	Contig	Universidad Nacional Mayor de San Marcos	SAMN03375481	GCA_001874105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/105/GCA_001874105.1_ASM187410v1	-	unmsm
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12549	41.2	-	CWEN01	77	2058	1876	6/23/15	3/26/17	Contig	SC	SAMEA1032798	GCA_001175745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/745/GCA_001175745.1_6903_8_56	-	EQUI0201
Stenotrophomonas maltophilia	40324	PRJNA277366	277366	Proteobacteria	Gammaproteobacteria	4.75211	66.2	-	JZIU01	3	4441	4271	8/26/15	3/26/17	Contig	Icahn School of Medicine at Mount Sinai	SAMN03389651	GCA_001275085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/085/GCA_001275085.1_ISMMS4v1	26324280	ISMMS4
Bacillus amyloliquefaciens	1390	PRJNA359364	359364	Terrabacteria group	Firmicutes	4.01666	46.2	-	MSTO01	17	4013	3840	3/9/17	3/11/17	Scaffold	University of Alberta	SAMN06190352	GCA_002024555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/555/GCA_002024555.1_ASM202455v1	-	F11
Chlamydia psittaci	83554	PRJNA312249	312249	PVC group	Chlamydiae	1.23967	39.0613	plasmid unnamed:NZ_CM007184.1/CM007184.1	LZRF01	78	1106	1034	9/20/16	4/5/17	Contig	University of the Sunshine Coast	SAMN04496848	GCA_001735985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/735/985/GCA_001735985.1_ASM173598v1	-	Ho Re lower
Enterococcus faecium LCT-EF90	1167697	PRJNA141665	141665	Terrabacteria group	Firmicutes	2.774	38.4	-	AJKH01	31	2768	2574	4/9/12	3/23/17	Scaffold	BGI-shenzhen	SAMN02469377	GCA_000258325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/325/GCA_000258325.1_Enterococcus_faecium_LCT-EF90_version_1.0	22689242	LCT-EF90
Neisseria gonorrhoeae SK16259	1352521	PRJNA209343	209343	Proteobacteria	Betaproteobacteria	2.0801	52.6	-	ATPO01	430	2456	2061	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02338791	GCA_001025825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/825/GCA_001025825.1_ASM102582v1	-	SK16259
Streptococcus mutans TCI-224	1074164	PRJNA72071	72071	Terrabacteria group	Firmicutes	1.79774	37	-	AGLS01	133	1800	1687	10/6/11	3/22/17	Contig	JCVI	SAMN02436355	GCA_000229545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/545/GCA_000229545.2_SMUT6-NEX_21-224	-	TCI-224
Enterococcus faecalis TX4000	749493	PRJNA47133	47133	Terrabacteria group	Firmicutes	2.8403	37.5	-	AEBB01	55	2890	2751	8/27/10	3/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189130	GCA_000148445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/445/GCA_000148445.1_ASM14844v1	-	TX4000
Brucella suis 94/11	1198695	PRJNA176535	176535	Proteobacteria	Alphaproteobacteria	3.31933	57.2	-	AQNW01	11	3383	3158	4/16/13	4/1/17	Contig	Broad Institute	SAMN01047746	GCA_000366245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/245/GCA_000366245.1_Bruc_suis_94_11_V1	-	94/11
Treponema pallidum subsp. pertenue	168	PRJNA378179	378179	Spirochaetes	Spirochaetia	1.13958	52.8	chromosome:NZ_CP020365.1/CP020365.1	-	1	1067	1006	8/28/17	8/30/17	Chromosome	Veterinary Research Institute	SAMN06480792	GCA_002271195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/195/GCA_002271195.1_ASM227119v1	-	Ghana-051
Clostridium botulinum NCTC 2916	445335	PRJNA20013	20013	Terrabacteria group	Firmicutes	4.03136	28.5	-	ABDO02	49	3834	3575	7/11/07	3/22/17	Contig	J. Craig Venter Institute	SAMN02436237	GCA_000171055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/055/GCA_000171055.1_ASM17105v1	-	NCTC 2916
Enterococcus thailandicus	417368	PRJNA400701	400701	Terrabacteria group	Firmicutes	2.64625	36.8	chromosome:NZ_CP023074.1/CP023074.1	-	1	2499	2370	9/12/17	9/21/17	Complete Genome	Health Sciences North Research Institute	SAMN07572979	GCA_002290025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/025/GCA_002290025.1_ASM229002v1	-	a523
Lactobacillus casei 32G	1051652	PRJNA68463	68463	Terrabacteria group	Firmicutes	3.0115	46.4	-	AFYL01	42	3090	2920	11/2/12	1/8/14	Contig	University of Wisconsin-Madison and Utah State University	SAMN02472010	GCA_000309605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/605/GCA_000309605.1_ASM30960v1	23035691	32G
Streptococcus iniae	1346	PRJNA385746	385746	Terrabacteria group	Firmicutes	2.11657	36.8	chromosome:NZ_CP022392.1/CP022392.1	-	1	2055	1920	7/17/17	7/19/17	Complete Genome	University of Queensland	SAMN06909305	GCA_002220115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/115/GCA_002220115.1_ASM222011v1	-	QMA0248
Vibrio parahaemolyticus	670	PRJNA275536	275536	Proteobacteria	Gammaproteobacteria	5.20647	45	-	JZAO01	188	5083	4803	3/23/15	3/25/17	Scaffold	Health Canada	SAMN03349603	GCA_000960645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/645/GCA_000960645.1_ASM96064v1	-	08-0278
Streptococcus mitis	28037	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.88894	40.2	-	NCVC01	17	1917	1781	4/18/17	4/21/17	Scaffold	Slagelse Hospital	SAMN06705606	GCA_002096735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/735/GCA_002096735.1_ASM209673v1	27325438	RH_8961_10
Oenococcus oeni S19	1428441	PRJNA229731	229731	Terrabacteria group	Firmicutes	1.81039	37.8	-	AZLK01	65	1860	1686	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02904293	GCA_000762085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/085/GCA_000762085.1_Oeoe_S19_1.0	24901216	S19
Xanthomonas oryzae pv. oryzae	64187	PRJNA269409	269409	Proteobacteria	Gammaproteobacteria	4.26891	63.9	-	JXEF01	435	4250	3405	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252508	GCA_001927575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/575/GCA_001927575.1_ASM192757v1	-	BXO571
Campylobacter fetus subsp. venerealis	32020	PRJNA285151	285151	Proteobacteria	delta/epsilon subdivisions	1.88155	33	-	LREY01	90	1946	1828	8/5/16	4/5/17	Contig	Utrecht University	SAMN04419580	GCA_001699725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/725/GCA_001699725.1_ASM169972v1	27333878	zaf65
Xanthomonas citri subsp. citri	611301	PRJEB7147	306104	Proteobacteria	Gammaproteobacteria	5.22415	64.7	-	CCVZ01	42	4918	4845	12/16/15	12/16/15	Scaffold	Genoscope CEA	SAMEA2752225	GCA_001487915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/915/GCA_001487915.1_ASX_I_PRJEB7147_v1	-	-
Lactobacillus delbrueckii	1584	PRJEB13997	324048	Terrabacteria group	Firmicutes	2.18898	51.1	-	FLLT01	10	-	-	5/28/16	5/28/16	Contig	JLU	SAMEA3986259	GCA_900088455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/455/GCA_900088455.1_Lactobacillus_22L	-	-
Yersinia pseudotuberculosis	633	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.72763	47.4	-	CHDQ01	86	4392	4134	4/21/15	4/4/17	Scaffold	SC	SAMEA859921	GCA_001319785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/785/GCA_001319785.1_5139_3_11	-	IP33250
Brucella abortus bv. 1 str. NI016	1051060	PRJNA74331	74331	Proteobacteria	Alphaproteobacteria	3.28659	57.2	-	AGVK01	3	3382	3154	2/3/12	3/22/17	Scaffold	Broad Institute	SAMN02596744	GCA_000245935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/935/GCA_000245935.1_Bruc_abor_bv1_NI016_V1	-	NI016
Francisella tularensis subsp. tularensis str. SCHU S4 substr. SL	1341659	PRJNA217351	217351	Proteobacteria	Gammaproteobacteria	1.89431	32.3	-	JIDT01	2	1931	1664	4/11/14	4/2/17	Scaffold	Broad Institute	SAMN02335349	GCA_000628965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/965/GCA_000628965.1_Fran_tula_Schu_S4_SL_V1	-	Schu S4 substr. SL
Shigella boydii	621	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.51022	50.3	-	NQBT01	262	6042	5494	8/11/17	8/15/17	Contig	JCVI	SAMN07450635	GCA_002247695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/695/GCA_002247695.1_ASM224769v1	-	ECSW+04
Clostridioides difficile CD002	1215063	PRJEB193	222724	Terrabacteria group	Firmicutes	4.05594	28.4	-	CAMG01	71	3714	3594	10/14/13	3/15/17	Scaffold	LPBA	SAMEA3138913	GCA_000531625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/625/GCA_000531625.1_CD002	-	CD002
Vibrio cholerae 1587	412966	PRJNA18265	18265	Proteobacteria	Gammaproteobacteria	4.21619	47.4	-	AAUR02	73	4134	3866	11/27/06	3/26/17	Scaffold	TIGR	SAMN02435867	GCA_000168895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/895/GCA_000168895.2_Vibrio_cholerae_1587	-	1587
Ralstonia solanacearum	305	PRJNA259636	259636	Proteobacteria	Betaproteobacteria	5.25457	66.7	-	JQSH01	181	4721	4442	9/9/14	4/2/17	Contig	University of Exeter	SAMN03009966	GCA_000750575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/575/GCA_000750575.1_ASM75057v1	-	NCPPB 282
Bacillus thuringiensis serovar kurstaki str. T03a001	527023	PRJNA29711	29711	Terrabacteria group	Firmicutes	5.52757	35	chromosome:NZ_CM000751.1/CM000751.1	ACND01	1	11665	11170	4/30/09	6/15/17	Chromosome	Naval Medical Research Center	SAMN00717315	GCA_000161575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/575/GCA_000161575.1_ASM16157v1	22645259	T03a001
Burkholderia mallei strain_11	1382521	PRJNA214255	214255	Proteobacteria	Betaproteobacteria	5.72821	68.7	-	AWGP01	188	6079	5612	1/31/14	4/4/17	Contig	Translational Genomics Research Institute	SAMN02303035	GCA_000565405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/405/GCA_000565405.2_BMstrain11	-	strain_11
Sulfolobus acidocaldarius	2285	PRJNA378849	378849	TACK group	Crenarchaeota	2.28671	36.8	chromosome:NZ_CP020362.1/CP020362.1	-	1	2415	2320	7/6/17	7/8/17	Complete Genome	Harvard University	SAMN06562951	GCA_002215485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/485/GCA_002215485.1_ASM221548v1	-	Y14 16-22
Streptococcus iniae	1346	PRJNA352154	352154	Terrabacteria group	Firmicutes	2.09865	36.8	chromosome:NZ_CP017952.1/CP017952.1	-	1	2030	1871	11/22/16	4/5/17	Complete Genome	National Taiwan Ocean University	SAMN05967356	GCA_001885145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/145/GCA_001885145.1_ASM188514v1	-	89353
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.2434	67	-	MUQJ01	140	7950	7399	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001817	GCA_001991235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/235/GCA_001991235.1_ASM199123v1	-	VC9041
Lactobacillus reuteri	1598	PRJNA328441	328441	Terrabacteria group	Firmicutes	2.24197	38.3	-	MBLS01	186	2255	2009	8/11/16	4/5/17	Scaffold	Sheba Medical Center	SAMN05371178	GCA_001703885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/703/885/GCA_001703885.1_ASM170388v1	-	482_54
Bacteroides fragilis str. 3719 T6	1339306	PRJNA206149	206149	FCB group	Bacteroidetes/Chlorobi group	4.98608	43.2	-	JGEH01	64	4506	4213	3/20/14	4/18/17	Contig	IGS	SAMN02314530	GCA_000598725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/725/GCA_000598725.1_ASM59872v1	-	3719 T6
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.75141	50.7	-	CXGQ01	416	5362	4578	7/17/15	2/24/17	Contig	SC	SAMEA1324206	GCA_001256255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/255/GCA_001256255.1_7655_8_10	-	H112700289
Lactobacillus helveticus	1587	PRJNA292623	292623	Terrabacteria group	Firmicutes	2.16058	36.8	chromosome:NZ_CP012381.1/CP012381.1	-	1	2206	1851	10/8/15	4/4/17	Complete Genome	China Agricultural University	SAMN03982146	GCA_001308285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/308/285/GCA_001308285.1_ASM130828v1	-	CAUH18
Bacillus licheniformis	1402	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.16203	46	-	NPCU01	76	4311	4170	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372723	GCA_002272335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/335/GCA_002272335.1_assembly-7712_v1	-	7712
Vibrio vulnificus	672	PRJNA280798	280798	Proteobacteria	Gammaproteobacteria	4.95273	46.5	-	MVKO01	145	4667	4435	3/28/17	3/30/17	Contig	"Technische Universitaet Dresden, Medical Faculty 'Carl Gustav Carus'"	SAMN03470190	GCA_002073055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/055/GCA_002073055.1_ASM207305v1	-	VN-0206
Pseudomonas syringae pv. syringae 642	673266	PRJNA40347	40347	Proteobacteria	Gammaproteobacteria	5.80939	59.2	-	ADGB01	296	5290	5064	2/4/10	5/19/17	Contig	Virginia Tech	SAMN02472094	GCA_000177515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/515/GCA_000177515.1_ASM17751v1	20064063	642
Streptococcus suis 4417	1214155	PRJNA171422	171422	Terrabacteria group	Firmicutes	2.22117	41.1	-	ALLC01	93	2217	2071	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469534	GCA_000440475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/475/GCA_000440475.1_version1	-	4417
Streptococcus agalactiae MC629	1333574	PRJNA203069	203069	Terrabacteria group	Firmicutes	2.04976	35.3	-	ATOR01	34	2094	2008	7/3/13	3/18/17	Scaffold	The Genome Institute	SAMN02436825	GCA_000419055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/055/GCA_000419055.2_S_agalactiaeMC629-1.0	-	MC629
Streptococcus iniae	1346	PRJNA271544	271544	Terrabacteria group	Firmicutes	2.08696	36.8	chromosome:NZ_CP010783.1/CP010783.1	-	1	2020	1863	2/3/15	4/3/17	Complete Genome	"ChunLab, Inc"	SAMN03286870	GCA_000831485.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/485/GCA_000831485.1_ASM83148v1	25908134	YSFST01-82
Streptococcus mutans UA159-FR	1437447	PRJNA231968	231968	Terrabacteria group	Firmicutes	2.03169	36.8	chromosome:NZ_CP007016.1/CP007016.1	-	1	2072	1940	1/9/15	3/25/17	Complete Genome	Jilin University	SAMN03278343	GCA_000817065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/065/GCA_000817065.1_ASM81706v1	-	UA159-FR
Fusobacterium nucleatum subsp. vincentii ATCC 49256	209882	PRJNA1419	1419	Fusobacteria	Fusobacteriia	2.11826	27.3	-	AABF01	302	2250	2250	1/24/03	1/8/14	Contig	Integrated Genomics	SAMN02470057	GCA_000182945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/182/945/GCA_000182945.1_ASM18294v1	12799352	ATCC 49256
Bifidobacterium longum	216816	PRJNA298113	298113	Terrabacteria group	Actinobacteria	2.38762	60.2	-	LKUQ01	24	2110	1939	3/21/16	4/5/17	Contig	N. Blokhina Nizhny Novgorod Research Institute of Epidemiology and Microbiology	SAMN04155602	GCA_001595465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/465/GCA_001595465.1_ASM159546v1	-	379
Shigella flexneri 2a	42897	PRJNA278281	278281	Proteobacteria	Gammaproteobacteria	4.35238	50.7	-	LAIF01	347	4837	4114	6/1/15	2/23/17	Contig	U.S. Food and Drug Administration	SAMN03420996	GCA_001017405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/405/GCA_001017405.1_ASM101740v1	25980352	BS1046
Bacillus anthracis	1392	PRJNA270580	270580	Terrabacteria group	Firmicutes	5.32224	35.4555	chromosome:NZ_CP010342.1/CP010342.1; plasmid pXO2:NZ_CP010343.1/CP010343.1	-	2	5915	5537	12/29/14	4/10/17	Chromosome	BEI Resources/American Type	SAMN03267488	GCA_000808075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/075/GCA_000808075.1_ASM80807v1	-	A0157
Pseudomonas putida	303	PRJNA287247	287247	Proteobacteria	Gammaproteobacteria	6.3255	62.4	-	LKKS01	150	6012	5772	10/5/15	4/4/17	Contig	Abengoa Research	SAMN03779024	GCA_001306495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/495/GCA_001306495.1_ASM130649v1	26820467	HB13667
Leptospira interrogans serovar Pomona str. UT364	1049925	PRJNA74131	74131	Spirochaetes	Spirochaetia	5.11346	35.2	-	AHNX02	291	4738	4171	1/24/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436379	GCA_000244415.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/415/GCA_000244415.3_LintUT364v0.2	-	UT364
Streptococcus iniae	1346	PRJNA244502	244502	Terrabacteria group	Firmicutes	2.07082	36.8	chromosome:CP007586.1	-	1	1997	1872	4/28/14	6/13/14	Complete Genome	"USDA, ARS"	SAMN02726853	GCA_000648525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/525/GCA_000648525.1_ASM64852v1	-	ISET0901
Streptococcus iniae	1346	PRJNA244738	244738	Terrabacteria group	Firmicutes	2.07018	36.8	chromosome:CP007587.1	-	1	1996	1865	4/28/14	6/18/14	Complete Genome	"USDA, ARS"	SAMN02728459	GCA_000648555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/555/GCA_000648555.1_ASM64855v1	-	ISNO
Lactobacillus helveticus R0052	880633	PRJNA51767	51767	Terrabacteria group	Firmicutes	2.12921	36.8	chromosome:NC_018528.1/CP003799.1	-	1	2173	1761	9/5/12	3/30/17	Complete Genome	Institut Rosell Lallemand Inc.	SAMN02603348	GCA_000165775.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/165/775/GCA_000165775.3_ASM16577v3	23105080	R0052
Streptococcus pneumoniae PNI0002	1159087	PRJNA89177	89177	Terrabacteria group	Firmicutes	2.10225	39.7	-	AKRA01	32	2341	2093	1/29/13	3/9/17	Scaffold	Washington University	SAMN02299523	GCA_000334635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/635/GCA_000334635.1_ASM33463v1	-	PNI0002
Streptococcus mutans GS-5	1198676	PRJNA168469	168469	Terrabacteria group	Firmicutes	2.02709	36.8	chromosome:NC_018089.1/CP003686.1	-	1	2024	1842	6/25/12	3/23/17	Complete Genome	KUMC	SAMN02603489	GCA_000271865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/865/GCA_000271865.1_ASM27186v1	22887682	GS-5
Belliella baltica DSM 15883	866536	PRJNA50619	50619	FCB group	Bacteroidetes/Chlorobi group	4.1966	36.8	chromosome:NC_018010.1/CP003281.1	-	1	3815	3664	6/8/12	5/18/17	Complete Genome	DOE Joint Genome Institute	SAMN02232009	GCA_000265405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/405/GCA_000265405.1_ASM26540v1	-	DSM 15883
Haemophilus influenzae	727	PRJNA285225	285225	Proteobacteria	Gammaproteobacteria	1.853	38	-	LFFP01	37	1871	1733	7/21/15	3/26/17	Contig	University of Oklahoma Health Sciences Center	SAMN03702712	GCA_001184475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/475/GCA_001184475.1_ASM118447v1	-	HI2007
Mycobacterium bovis	1765	PRJNA301187	301187	Terrabacteria group	Actinobacteria	4.29985	65.6	-	LNOF01	56	4228	3999	12/2/15	4/4/17	Contig	Animal and Plant Qarantine Agency	SAMN04241384	GCA_001455165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/165/GCA_001455165.1_ASM145516v1	-	B-3222
Mycobacterium avium subsp. silvaticum ATCC 49884	1401690	PRJNA219418	219418	Terrabacteria group	Actinobacteria	4.71317	69.2	-	AYOC01	808	4761	3833	12/9/13	4/2/17	Contig	National Animal Disease Center	SAMN02470590	GCA_000504975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/975/GCA_000504975.1_MAS_49884_version_1	-	ATCC 49884
Clostridium perfringens	1502	PRJNA327452	327452	Terrabacteria group	Firmicutes	3.58528	27.9	-	MASA01	68	3363	3165	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323902	GCA_001949695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/695/GCA_001949695.1_ASM194969v1	28062388	JFP978
Xanthomonas campestris	339	PRJNA328328	328328	Proteobacteria	Gammaproteobacteria	5.01793	65.1	-	MBDP01	50	4470	4126	8/17/16	4/5/17	Contig	Technische Universitaet Muenchen	SAMN05369631	GCA_001705825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/825/GCA_001705825.1_ASM170582v1	-	LMG 8031
Lactococcus lactis subsp. lactis	1360	PRJNA261703	261703	Terrabacteria group	Firmicutes	2.57915	34.9	-	JRKY01	111	2687	2259	10/1/14	4/10/17	Contig	UFRJ	SAMN03075524	GCA_000761565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/565/GCA_000761565.1_ASM76156v1	25395632	CECT 4433
Bacillus cereus AH1273	526994	PRJNA29699	29699	Terrabacteria group	Firmicutes	5.7905	35.2502	chromosome:NZ_CM000741.1/CM000741.1	ACMT01	1	12210	11569	4/30/09	6/15/17	Chromosome	Naval Medical Research Center	SAMN00727677	GCA_000003955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/003/955/GCA_000003955.1_ASM395v1	22645259	AH1273
Staphylococcus epidermidis NIHLM001	979219	PRJNA62387	62387	Terrabacteria group	Firmicutes	2.61586	31.9	-	AKHC01	87	2626	2389	7/9/12	3/23/17	Contig	NISC - NIH Intramural Sequencing Center	SAMN00993289	GCA_000276145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/145/GCA_000276145.1_ASM27614v1	-	NIHLM001
Lactobacillus helveticus H10	767462	PRJNA49153	49153	Terrabacteria group	Firmicutes	2.17238	36.8	chromosome:NC_017467.1/CP002429.1; plasmid pH10:NC_017468.1/CP002430.1	-	2	2236	1901	2/16/11	3/30/17	Complete Genome	"The Key Laboratory of Dairy Biotechnology and Bioengineering, Education Ministry of P. R. China, Department of Food Science and Engineering, Inner Mongolia Agricultural University, China"	SAMN02603939	GCA_000189515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/515/GCA_000189515.1_ASM18951v1	21398542	H10
Yersinia pestis subsp. microtus bv. Ulegeica	385969	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.52322	47.5	-	JYJW01	477	4331	3826	3/11/15	3/25/17	Scaffold	SRCAMB	SAMN03256459	GCA_000950935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/935/GCA_000950935.1_ASM95093v1	-	SCPM-O-B-6906
Pseudomonas fluorescens	294	PRJNA262940	262940	Proteobacteria	Gammaproteobacteria	6.11645	60	-	JRXZ01	29	5627	5418	12/16/14	4/2/17	Contig	"University of Michigan, Ann Arbor"	SAMN03092886	GCA_000801815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/815/GCA_000801815.1_PfAU6308	-	AU6308
Staphylothermus hellenicus DSM 12710	591019	PRJNA33683	33683	TACK group	Crenarchaeota	1.58035	36.8	chromosome:NC_014205.1/CP002051.1	-	1	1651	1586	6/1/10	8/21/15	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002730	GCA_000092465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/465/GCA_000092465.1_ASM9246v1	22180806	DSM 12710
Streptococcus mutans NN2025	511691	PRJDA28997	28997	Terrabacteria group	Firmicutes	2.01359	36.8	chromosome:NC_013928.1/AP010655.1	-	1	2024	1876	8/1/09	3/22/17	Complete Genome	"The Institute of Medical Science, Tokyo University"	SAMD00060939	GCA_000091645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/091/645/GCA_000091645.1_ASM9164v1	19656368	NN2025
Alkaliphilus metalliredigens QYMF	293826	PRJNA13006	13006	Terrabacteria group	Firmicutes	4.92957	36.8	chromosome:NC_009633.1/CP000724.1	-	1	4875	4641	6/28/07	5/18/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598282	GCA_000016985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/985/GCA_000016985.1_ASM1698v1	-	QYMF
Streptococcus mutans UA159	210007	PRJNA333	333	Terrabacteria group	Firmicutes	2.03293	36.8	chromosome:NC_004350.2/AE014133.2	-	1	2040	1958	10/25/02	5/21/17	Complete Genome	Univ. Oklahoma	SAMN02604090	GCA_000007465.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/465/GCA_000007465.2_ASM746v2	12397186	UA159
Lactobacillus gallinarum	52242	PRJNA297274	297274	Terrabacteria group	Firmicutes	2.37478	36.74	chromosome:NZ_CP012890.1/CP012890.1; plasmid pMKG01:NZ_CP012891.1/CP012891.1; plasmid pMKG02:NZ_CP012892.1/CP012892.1; plasmid pMKG03:NZ_CP012893.1/CP012893.1; plasmid pMKG05:NZ_CP012895.1/CP012895.1; plasmid pMKG06:NZ_CP012896.1/CP012896.1	-	6	2433	1901	10/14/15	4/13/17	Complete Genome	CSIR-Institute of Himalayan Bioresource Technology	SAMN04121884	GCA_001314245.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/245/GCA_001314245.2_ASM131424v2	-	HFD4
Lactobacillus sp. wkB8	1545702	PRJNA260941	260941	Terrabacteria group	Firmicutes	1.93253	36.7076	chromosome:NZ_CP009531.1/CP009531.1; plasmid wkB8_plasmid:NZ_CP009532.1/CP009532.1	-	2	1801	1715	10/1/14	4/10/17	Complete Genome	Yale University	SAMN03067541	GCA_000761135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/135/GCA_000761135.1_ASM76113v1	25395644	wkB8
Pseudomonas fluorescens	294	PRJNA262951	262951	Proteobacteria	Gammaproteobacteria	6.88089	59.5	-	JRXX01	109	6439	6104	12/16/14	4/10/17	Contig	"University of Michigan, Ann Arbor"	SAMN03092896	GCA_000801875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/875/GCA_000801875.1_PfAU14440	25635025	AU14440
Yersinia pestis subsp. microtus bv. Ulegeica	385969	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.6248	47.5	-	JYJX01	326	4370	4026	3/11/15	3/25/17	Scaffold	SRCAMB	SAMN03256423	GCA_000950945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/945/GCA_000950945.1_ASM95094v1	-	SCPM-O-B-6706
Staphylococcus piscifermentans	70258	PRJEB6403	251923	Terrabacteria group	Firmicutes	2.61327	36.7	chromosome 1:NZ_LT906447.1/LT906447.1	-	1	2458	2362	8/15/17	8/28/17	Complete Genome	SC	SAMEA4384060	GCA_900186985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/985/GCA_900186985.1_50377_C01	-	NCTC13836
Staphylococcus epidermidis NIHLM003	979218	PRJNA62385	62385	Terrabacteria group	Firmicutes	2.5973	32	-	AKHB01	72	2624	2448	7/9/12	3/23/17	Contig	NISC - NIH Intramural Sequencing Center	SAMN00993288	GCA_000276165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/165/GCA_000276165.1_ASM27616v1	-	NIHLM003
Bacillus cereus ATCC 10876	526980	PRJNA29671	29671	Terrabacteria group	Firmicutes	5.93902	34.8	chromosome:NZ_CM000715.1/CM000715.1	ACLT01	1	12258	11745	4/30/09	5/18/17	Chromosome	Naval Medical Research Center	SAMN00715886	GCA_000160895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/895/GCA_000160895.1_ASM16089v1	22645259	ATCC 10876
Lactococcus lactis subsp. lactis 1AA59	1379274	PRJNA213570	213570	Terrabacteria group	Firmicutes	2.57654	35	-	AZQT01	218	2612	2411	11/25/14	4/2/17	Contig	Instituto de Productos Lacteos de Asturias (IPLA-CSIC)	SAMN03220318	GCA_000786755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/755/GCA_000786755.1_Llactis1AA59	26089428	1AA59
Xanthomonas campestris pv. azadirachtae	487852	PRJNA298615	298615	Proteobacteria	Gammaproteobacteria	5.18445	64.5	-	LOKS01	236	4743	4172	3/6/17	4/11/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN04145208	GCA_002019075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/075/GCA_002019075.1_ASM201907v1	-	LMG543
Clostridium perfringens	1502	PRJNA327453	327453	Terrabacteria group	Firmicutes	3.65459	28	-	MASB01	67	3382	3201	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323903	GCA_001949715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/715/GCA_001949715.1_ASM194971v1	28062388	JFP980
Mycobacterium avium subsp. paratuberculosis 11-1786	1391993	PRJNA216930	216930	Terrabacteria group	Actinobacteria	4.67368	69	-	AYOA01	1308	4827	3539	12/9/13	4/2/17	Contig	National Animal Disease Center	SAMN02470582	GCA_000504995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/995/GCA_000504995.1_MAP_1786_version_1	-	11-1786
Mycobacterium bovis BCG	33892	PRJEB10696	301489	Terrabacteria group	Actinobacteria	4.24579	65.6	-	CYST01	131	4207	3951	11/7/15	4/4/17	Contig	CEBITEC	SAMEA3539300	GCA_001458155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/458/155/GCA_001458155.1_S4	-	-
Haemophilus influenzae	727	PRJNA285220	285220	Proteobacteria	Gammaproteobacteria	1.88729	37.9	-	LFFR01	75	1903	1762	7/21/15	3/26/17	Contig	University of Oklahoma Health Sciences Center	SAMN03702707	GCA_001184485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/485/GCA_001184485.1_ASM118448v1	26404588	HI2114
Sulfolobus acidocaldarius	2285	PRJNA378849	378849	TACK group	Crenarchaeota	2.17159	36.7	chromosome:NZ_CP020360.1/CP020360.1	-	1	2323	2229	7/6/17	7/8/17	Complete Genome	Harvard University	SAMN06562953	GCA_002215405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/405/GCA_002215405.1_ASM221540v1	-	Y14 18-5
Sulfolobus acidocaldarius	2285	PRJNA378849	378849	TACK group	Crenarchaeota	2.27034	36.7	chromosome:NZ_CP020361.1/CP020361.1	-	1	2390	2295	7/6/17	7/8/17	Complete Genome	Harvard University	SAMN06562952	GCA_002215445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/445/GCA_002215445.1_ASM221544v1	-	Y14 20-20
Streptococcus pneumoniae PNI0006	1159088	PRJNA89179	89179	Terrabacteria group	Firmicutes	2.05238	39.8	-	AKRB01	3	2266	2024	1/29/13	3/9/17	Scaffold	Washington University	SAMN02299524	GCA_000334655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/655/GCA_000334655.1_ASM33465v1	-	PNI0006
Sulfolobus acidocaldarius	2285	PRJNA378849	378849	TACK group	Crenarchaeota	2.2382	36.7	chromosome:NZ_CP020363.1/CP020363.1	-	1	2352	2256	7/6/17	7/8/17	Complete Genome	Harvard University	SAMN06562950	GCA_002215525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/525/GCA_002215525.1_ASM221552v1	-	Y14 13-1
Sulfolobus acidocaldarius	2285	PRJNA378849	378849	TACK group	Crenarchaeota	2.22585	36.7	chromosome:NZ_CP020364.1/CP020364.1	-	1	2333	2249	7/6/17	7/8/17	Complete Genome	Harvard University	SAMN06562949	GCA_002215565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/565/GCA_002215565.1_ASM221556v1	-	DG1
Macrococcus caseolyticus	69966	PRJNA384137	384137	Terrabacteria group	Firmicutes	2.2756	36.7	chromosome:NZ_CP021058.1/CP021058.1	-	1	2411	2297	5/9/17	5/22/17	Complete Genome	University of Bern	SAMN06829096	GCA_002119825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/825/GCA_002119825.1_ASM211982v1	28272476	IMD0819
Leptospira interrogans serovar Copenhageni str. HAI0188	1049819	PRJNA74149	74149	Spirochaetes	Spirochaetia	4.61736	35	-	AHOG02	31	4110	3757	1/24/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436381	GCA_000244595.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/595/GCA_000244595.3_gls454167v02	-	HAI0188
Pseudomonas putida	303	PRJNA287249	287249	Proteobacteria	Gammaproteobacteria	5.93051	61.7	-	LKKT01	122	5615	5366	10/5/15	4/4/17	Contig	Abengoa Research	SAMN03779026	GCA_001306515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/515/GCA_001306515.1_ASM130651v1	-	HB4184
Bacillus anthracis	1392	PRJNA273788	273788	Terrabacteria group	Firmicutes	5.50389	35.2629	chromosome:NZ_CP010813.1/CP010813.1; plasmid pXO1:NZ_CP010814.1/CP010814.1; plasmid pXO2:NZ_CP010815.1/CP010815.1	-	3	6134	5731	2/3/15	3/25/17	Chromosome	Bundeswehr Institute of Microbiology	SAMN03296000	GCA_000831505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/505/GCA_000831505.1_ASM83150v1	-	Pollino
Shigella flexneri 2a	42897	PRJNA279143	279143	Proteobacteria	Gammaproteobacteria	4.67971	50.5	-	LAJS01	484	5224	4312	7/21/15	8/8/17	Contig	U.S. Food and Drug Administration	SAMN03438037	GCA_001184045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/045/GCA_001184045.1_ASM118404v1	-	BS1057
Bifidobacterium longum subsp. infantis	1682	PRJDB4597	325619	Terrabacteria group	Actinobacteria	2.74983	60	-	BCYF01	114	2447	2170	6/10/16	4/5/17	Contig	Yakult Central Institute	SAMD00047616	GCA_001686105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/105/GCA_001686105.1_ASM168610v1	27340092	IN-07
Ezakiella massiliensis	1852374	PRJEB15652	347305	Terrabacteria group	Firmicutes	1.74178	36.7	chromosome contig00001:NZ_LT635475.1/LT635475.1	-	1	1653	1577	11/23/16	4/14/17	Complete Genome	URMITE	SAMEA4554850	GCA_900120165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/165/GCA_900120165.1_PRJEB15652	-	Marseille-P2951
Kurthia sp. 11kri321	1750719	PRJNA301103	301103	Terrabacteria group	Firmicutes	2.96453	36.7	chromosome:NZ_CP013217.1/CP013217.1	-	1	2969	2840	1/25/16	4/11/17	Complete Genome	Los Alamos National Laboratory	SAMN04235798	GCA_001534765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/765/GCA_001534765.1_ASM153476v1	-	11kri321
Streptococcus agalactiae MC628	1333573	PRJNA203068	203068	Terrabacteria group	Firmicutes	2.09399	35.2	-	ATOS01	50	2141	2056	7/3/13	3/18/17	Scaffold	The Genome Institute	SAMN02436764	GCA_000419075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/075/GCA_000419075.2_S_agalactiaeMC628-1.0	-	MC628
Streptococcus suis 4961	1214176	PRJNA171423	171423	Terrabacteria group	Firmicutes	2.01661	41.2	-	ALLD01	71	2054	1924	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469551	GCA_000440495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/495/GCA_000440495.1_version1	-	4961
Pseudomonas syringae pv. actinidiae str. NCPPB 3871	1052680	PRJEA68657	68657	Proteobacteria	Gammaproteobacteria	5.93809	58.8	-	AFTF01	462	5644	5247	11/3/11	5/19/17	Contig	Università di Udine	SAMN02471301	GCA_000233795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/795/GCA_000233795.2_ASM23379v2	-	NCPPB 3871
Vibrio vulnificus	672	PRJNA281155	281155	Proteobacteria	Gammaproteobacteria	4.96952	46.6895	plasmid pVN0288:NZ_CM007809.1/CM007809.1	MVKP01	163	4626	4398	3/28/17	4/1/17	Contig	"Technische Universitaet Dresden, Medical Faculty 'Carl Gustav Carus'"	SAMN03483372	GCA_002073065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/065/GCA_002073065.1_ASM207306v1	-	VN-0288
Bacillus licheniformis	1402	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.35056	45.8	-	NPCT01	99	4573	4426	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372722	GCA_002272365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/365/GCA_002272365.1_assembly-7711_v1	-	7711
Lactobacillus ginsenosidimutans	1007676	PRJNA285015	285015	Terrabacteria group	Firmicutes	2.59056	36.7	chromosome:NZ_CP012034.1/CP012034.1	-	1	2582	2489	7/9/15	4/17/17	Complete Genome	Seoul Women's University	SAMN03734923	GCA_001050475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/475/GCA_001050475.1_ASM105047v1	-	EMML 3041
Shigella sonnei	624	PRJEB2075	203826	Proteobacteria	Gammaproteobacteria	4.69819	50.7	-	CXMC01	389	5299	4523	7/16/15	2/24/17	Contig	SC	SAMEA1560497	GCA_001256575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/575/GCA_001256575.1_8489_2_89	-	37514976
Bacteroides fragilis str. S24L26	1339324	PRJNA206167	206167	FCB group	Bacteroidetes/Chlorobi group	5.27379	43.1	-	JGEN01	72	4690	4398	3/20/14	4/2/17	Contig	IGS	SAMN02314565	GCA_000598745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/745/GCA_000598745.1_ASM59874v1	-	S24L26
Lactobacillus reuteri	1598	PRJNA328444	328444	Terrabacteria group	Firmicutes	2.27348	38.2	-	MBLU01	191	2295	2061	8/11/16	4/5/17	Scaffold	Sheba Medical Center	SAMN05371506	GCA_001703935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/703/935/GCA_001703935.1_ASM170393v1	-	484_39
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.27878	67	-	MUQL01	140	7838	7423	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001821	GCA_001991255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/255/GCA_001991255.1_ASM199125v1	-	VC3929
Lactobacillus acetotolerans	1600	PRJDB3543	277825	Terrabacteria group	Firmicutes	1.70486	36.7	chromosome Unknown:NZ_AP014808.1/AP014808.1	-	1	1686	1501	3/7/15	4/10/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00026530	GCA_001042405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/405/GCA_001042405.1_ASM104240v1	-	NBRC 13120
Streptococcus iniae SF1	1318633	PRJNA196817	196817	Terrabacteria group	Firmicutes	2.14984	36.7	chromosome:CP005941.1	-	1	2196	2125	5/30/13	3/14/14	Complete Genome	"Institute of Oceanology, Chinese Academy of Sciences"	SAMN02603405	GCA_000403625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/625/GCA_000403625.1_ASM40362v1	-	SF1
Burkholderia mallei 2000031281	1382516	PRJNA214255	214255	Proteobacteria	Betaproteobacteria	5.64414	68.7	-	AWGQ01	189	6014	5575	1/31/14	4/2/17	Contig	Translational Genomics Research Institute	SAMN02303030	GCA_000565425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/425/GCA_000565425.1_BM2000031281	-	2000031281
Bacillus thuringiensis serovar monterrey BGSC 4AJ1	527022	PRJNA29709	29709	Terrabacteria group	Firmicutes	6.48902	34.7	chromosome:NZ_CM000752.1/CM000752.1	ACNE01	1	13530	12959	4/30/09	6/15/17	Chromosome	Naval Medical Research Center	SAMN00726690	GCA_000161595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/595/GCA_000161595.1_ASM16159v1	22645259	BGSC 4AJ1
Ralstonia solanacearum	305	PRJNA259638	259638	Proteobacteria	Betaproteobacteria	5.58079	66.4	-	JQSI01	703	4993	4539	9/9/14	4/2/17	Contig	University of Exeter	SAMN03009990	GCA_000750585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/585/GCA_000750585.1_ASM75058v1	-	POPS2
Vibrio cholerae 2740-80	412614	PRJNA18253	18253	Proteobacteria	Gammaproteobacteria	4.06834	47.5	-	AAUT02	41	3935	3735	1/9/07	3/26/17	Scaffold	TIGR	SAMN02435841	GCA_000168915.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/915/GCA_000168915.3_ASM16891v3	-	2740-80
Clostridioides difficile E7	1215078	PRJEB208	222748	Terrabacteria group	Firmicutes	4.21031	28.5	-	CAMV01	409	3975	3808	10/14/13	3/16/17	Scaffold	LPBA	SAMEA3138914	GCA_000531655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/655/GCA_000531655.1_E7	24482682	E7
Shigella boydii	621	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.90273	50.5	-	NQBY01	152	5152	4725	8/11/17	8/15/17	Contig	JCVI	SAMN07450630	GCA_002247815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/815/GCA_002247815.1_ASM224781v1	-	ECSW+09
Francisella tularensis subsp. tularensis str. SCHU S4 substr. NR-643	1341658	PRJNA217350	217350	Proteobacteria	Gammaproteobacteria	1.89283	32.3	-	JIDU01	2	1928	1667	4/11/14	4/2/17	Scaffold	Broad Institute	SAMN02335348	GCA_000628985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/985/GCA_000628985.1_Fran_tula_Schu_S4_NR-643_V1	-	Schu S4 substr. NR-643
Brucella abortus bv. 1 str. NI021	1051061	PRJNA74333	74333	Proteobacteria	Alphaproteobacteria	3.29779	57.2	-	AGVL01	3	3396	3161	2/3/12	3/23/17	Scaffold	Broad Institute	SAMN02596745	GCA_000245955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/955/GCA_000245955.1_Bruc_abor_bv1_NI021_V1	-	NI021
Yersinia pseudotuberculosis	633	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.85015	47.4	-	CGGM01	122	4518	4231	3/15/15	4/4/17	Scaffold	SC	SAMEA859934	GCA_001319885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/885/GCA_001319885.1_4840_7_11	-	OK6088
Xanthomonas citri subsp. citri	611301	PRJEB7160	306117	Proteobacteria	Gammaproteobacteria	5.30576	64.6	-	CCWK01	41	5014	4940	12/16/15	12/16/15	Scaffold	Genoscope CEA	SAMEA2752278	GCA_001488315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/315/GCA_001488315.1_ASX_E_PRJEB7160_v1	-	-
Campylobacter fetus subsp. venerealis	32020	PRJNA285149	285149	Proteobacteria	delta/epsilon subdivisions	1.86431	33.1	-	LREZ01	59	1921	1815	8/5/16	4/5/17	Contig	Utrecht University	SAMN04419582	GCA_001699735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/735/GCA_001699735.1_ASM169973v1	27333878	zaf3
Xanthomonas oryzae pv. oryzae	64187	PRJNA269411	269411	Proteobacteria	Gammaproteobacteria	4.25507	63.9	-	JXEH01	418	4237	3419	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252510	GCA_001927605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/605/GCA_001927605.1_ASM192760v1	-	BXO589
Oenococcus oeni IOEB_VF	1428434	PRJNA229569	229569	Terrabacteria group	Firmicutes	1.78254	37.8	-	AZLM01	48	1832	1662	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02904295	GCA_000762105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/105/GCA_000762105.1_Oeoe_IOEB_VF_1.0	24901216	IOEB_VF
Streptococcus mitis	28037	PRJNA304678	304678	Terrabacteria group	Firmicutes	2.05713	39.9	-	NCVF01	26	2146	2003	4/18/17	4/21/17	Scaffold	Slagelse Hospital	SAMN06705603	GCA_002096755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/755/GCA_002096755.1_ASM209675v1	27325438	RH_50275_09
Vibrio parahaemolyticus	670	PRJNA275536	275536	Proteobacteria	Gammaproteobacteria	5.05936	45.3	-	JZAQ01	155	4852	4571	3/23/15	3/26/17	Scaffold	Health Canada	SAMN03349605	GCA_000960655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/655/GCA_000960655.1_ASM96065v1	-	Sep-17
Sulfolobus acidocaldarius Ron12/I	1028567	PRJNA66535	66535	TACK group	Crenarchaeota	2.22398	36.7	chromosome:NC_020247.1/CP002818.1	-	1	2331	2243	2/8/13	4/1/17	Complete Genome	University of Cincinnati	SAMN02604153	GCA_000338775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/338/775/GCA_000338775.1_ASM33877v1	22418622	Ron12/I
Lactobacillus casei DSM 20011 = JCM 1134	1423732	PRJDB638	243216	Terrabacteria group	Firmicutes	2.78002	47.7	-	BALS01	178	-	-	4/1/14	7/24/15	Contig	The University of Tokyo	SAMD00015724	GCA_000615205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/205/GCA_000615205.1_ASM61520v1	-	JCM 1134
Sulfolobus acidocaldarius N8	1028566	PRJNA66533	66533	TACK group	Crenarchaeota	2.17636	36.7	chromosome:NC_020246.1/CP002817.1	-	1	2287	2207	2/8/13	4/1/17	Complete Genome	University of Cincinnati	SAMN02604152	GCA_000340315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/315/GCA_000340315.1_ASM34031v1	22418622	N8
Clostridium botulinum Bf	445336	PRJNA20015	20015	Terrabacteria group	Firmicutes	4.21775	28.2	-	ABDP01	70	4153	3847	7/11/07	6/15/17	Contig	J. Craig Venter Institute	SAMN02436292	GCA_000171075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/075/GCA_000171075.1_ASM17107v1	-	Bf
Treponema pallidum subsp. pertenue	168	PRJNA378185	378185	Spirochaetes	Spirochaetia	1.13958	52.8	chromosome:NZ_CP020366.1/CP020366.1	-	1	1067	1006	8/28/17	8/30/17	Chromosome	Veterinary Research Institute	SAMN06480828	GCA_002271235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/235/GCA_002271235.1_ASM227123v1	-	CDC 2575
Brucella suis CNGB 786	1198682	PRJNA176522	176522	Proteobacteria	Alphaproteobacteria	3.30777	57.3	-	AQNX01	8	3351	3151	4/16/13	4/1/17	Contig	Broad Institute	SAMN01047733	GCA_000366265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/265/GCA_000366265.1_Bruc_suis_CNGB_786_V1	-	CNGB 786
Enterococcus faecalis T1	565636	PRJNA32915	32915	Terrabacteria group	Firmicutes	2.95069	37.7	-	ACAD01	16	2954	2822	5/28/09	3/22/17	Scaffold	Broad Institute	SAMN02595249	GCA_000157135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/135/GCA_000157135.1_ASM15713v1	-	T1
Streptococcus mutans TCI-227	1074165	PRJNA72073	72073	Terrabacteria group	Firmicutes	1.8029	37	-	AGLT01	130	1828	1720	10/6/11	3/22/17	Contig	JCVI	SAMN02436356	GCA_000229565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/565/GCA_000229565.2_SMUT6-NEX_25-227	-	TCI-227
Neisseria gonorrhoeae SK16942	1352520	PRJNA209345	209345	Proteobacteria	Betaproteobacteria	2.07763	52.6	-	ATPP01	488	2475	2041	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02338792	GCA_001025835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/835/GCA_001025835.1_ASM102583v1	-	SK16942
Enterococcus faecium LCT-EF128	1178528	PRJNA161911	161911	Terrabacteria group	Firmicutes	2.67826	38.3	-	AJUP01	14	2621	2487	5/8/12	3/23/17	Scaffold	BGI-shenzhen	SAMN02469370	GCA_000262105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/105/GCA_000262105.1_Enterococcus_faecium_LCT-EF128_version_1.0	22887667	LCT-EF128
Chlamydia psittaci	83554	PRJNA312250	312250	PVC group	Chlamydiae	1.17046	39.1	-	LZRG01	9	1036	984	9/20/16	4/5/17	Contig	University of the Sunshine Coast	SAMN04496849	GCA_001736045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/736/045/GCA_001736045.1_ASM173604v1	-	Po An
Bacillus amyloliquefaciens	1390	PRJEB18880	360767	Terrabacteria group	Firmicutes	3.85046	46.6	-	FTNB01	16	3823	3655	1/14/17	4/6/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216239	GCA_900156245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/245/GCA_900156245.1_IMG-taxon_2681812862_annotated_assembly	-	GD4a
Stenotrophomonas maltophilia	40324	PRJNA277366	277366	Proteobacteria	Gammaproteobacteria	4.83247	66.9	-	JZIW01	10	4565	4267	8/26/15	3/26/17	Contig	Icahn School of Medicine at Mount Sinai	SAMN03389653	GCA_001275095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/095/GCA_001275095.1_ISMMS6v1	26324280	ISMMS6
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12749	41.2	-	CWFX01	72	2044	1874	6/24/15	3/26/17	Contig	SC	SAMEA1032799	GCA_001175765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/765/GCA_001175765.1_6817_1_71	-	EQUI0024
Pasteurella multocida subsp. septica	115545	PRJNA355236	355236	Proteobacteria	Gammaproteobacteria	2.27558	40.2	-	MTIK01	14	2171	2078	3/8/17	3/11/17	Contig	INRA	SAMN06140950	GCA_002023985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/985/GCA_002023985.1_ASM202398v1	-	CIRMBP-0922
Lactobacillus rhamnosus	47715	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.95569	46.5	-	JUWQ01	220	2977	2791	7/10/15	4/3/17	Contig	University of Washington	SAMN03197902	GCA_001066975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/975/GCA_001066975.1_ASM106697v1	26230489	699_LRHA
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31263	57.1716	chromosome 1:NZ_CP018568.1/CP018568.1; chromosome 2:NZ_CP018569.1/CP018569.1	-	2	3373	3143	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932980	GCA_002191835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/835/GCA_002191835.1_ASM219183v1	28388689	BwIM_XXX_54
Leuconostoc gelidum JB7	1229756	PRJNA174297	174297	Terrabacteria group	Firmicutes	1.8935	36.7	chromosome:NC_018631.1/CP003839.1	-	1	1874	1769	9/21/12	4/7/17	Complete Genome	"Department of Life Science, Chung-Ang University, Republic of Korea "	SAMN02603178	GCA_000298875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/875/GCA_000298875.1_ASM29887v1	23144409	JB7
Bordetella bronchiseptica B18-5 (C3)	1458258	PRJNA237083	237083	Proteobacteria	Betaproteobacteria	5.21802	68.2	-	JGWP01	101	4979	4756	5/12/14	4/4/17	Contig	JCVI	SAMN02614574	GCA_000690355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/355/GCA_000690355.2_gbb61v01	25908122	B18-5 (C3)
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.44924	53.5	-	MKYL01	40	2407	2192	12/6/16	8/3/17	Contig	Institute for Medical Research	SAMN05877640	GCA_001889835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/835/GCA_001889835.1_ASM188983v1	28254972	rz378
Mycoplasma pneumoniae	2104	PRJNA267612	267612	Terrabacteria group	Tenericutes	0.777576	39.5	-	JTGU01	29	763	661	12/2/15	4/4/17	Scaffold	Capital Institute of Pediatrics	SAMN03142251	GCA_001455605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/605/GCA_001455605.1_ASM145560v1	-	CIP10349
Yersinia enterocolitica subsp. enterocolitica NBRC 105693	1218100	PRJDB273	172096	Proteobacteria	Gammaproteobacteria	4.47213	47.3	-	BCZM01	60	4191	3922	3/11/16	3/28/17	Contig	National Institute of Technology and Evaluation	SAMD00046906	GCA_001598735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/735/GCA_001598735.1_ASM159873v1	-	NBRC 105693
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	3.96825	41.7	-	JJQF01	157	3412	3222	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708934	GCA_000979895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/895/GCA_000979895.1_gtlEnvA5udCFS	25756680	1.H.A.0.1
Leuconostoc mesenteroides	1245	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.80591	37.7	-	DGKW01	15	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455509	GCA_002387815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/815/GCA_002387815.1_ASM238781v1	28894102	-
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.16354	40.1	-	FQLP01	43	1043	949	5/10/17	5/24/17	Scaffold	WTSI	SAMEA1903255	GCA_900118995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/995/GCA_900118995.1_9471_4_65	-	162STDY5437298
Serratia marcescens H1q	1416757	PRJNA226208	226208	Proteobacteria	Gammaproteobacteria	5.24309	59.2	-	AYMO01	60	5031	4856	4/18/14	3/24/17	Contig	University of Malaya	SAMN02729848	GCA_000633335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/335/GCA_000633335.1_de_novo	-	H1q
Lactobacillus plantarum	1590	PRJNA286052	286052	Terrabacteria group	Firmicutes	3.21648	44.5	-	LEKW01	45	3136	2944	8/17/15	3/26/17	Scaffold	China Agricultural University	SAMN03764446	GCA_001267905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/905/GCA_001267905.1_ASM126790v1	-	L31-1
Mannheimia haemolytica	75985	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.83013	40.9	-	LQDK01	217	2958	2701	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366506	GCA_001930195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/195/GCA_001930195.1_ASM193019v1	-	2297MH
Campylobacter coli 1909	887295	PRJNA52727	52727	Proteobacteria	delta/epsilon subdivisions	1.70055	31.3	-	AINC01	132	1760	1665	3/16/12	3/18/17	Contig	Cornell University	SAMN02428938	GCA_000253815.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/815/GCA_000253815.3_ASM25381v3	-	1909
Burkholderia sp. RF4-BP95	1637845	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.41908	66.4	-	LOSX01	97	6875	6516	1/21/16	4/11/17	Contig	Northern Arizona University	SAMN03449131	GCA_001521985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/985/GCA_001521985.1_ASM152198v1	-	RF4-BP95
Propionibacterium acnes HL063PA2	765114	PRJNA49263	49263	Terrabacteria group	Actinobacteria	2.50384	60.1	-	ADYS01	16	2532	2391	7/30/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189232	GCA_000144735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/735/GCA_000144735.1_ASM14473v1	-	HL063PA2
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.40036	32.7	-	CUGE01	62	2347	2243	3/31/15	3/26/17	Contig	SC	SAMEA1035101	GCA_001231885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/885/GCA_001231885.1_7068_7_37	-	124655
Proteus mirabilis	584	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.84661	38.4	-	JVVD01	146	3465	3367	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197265	GCA_001060835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/835/GCA_001060835.1_ASM106083v1	26230489	1293_PMIR
Enterobacter cloacae MGH 53	1439329	PRJNA234252	234252	Proteobacteria	Gammaproteobacteria	5.09886	55.2	-	JMUT01	8	4939	4713	5/19/14	4/10/17	Scaffold	Broad Institute	SAMN02581385	GCA_000692315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/315/GCA_000692315.1_Ente_cloa_MGH_53_V1	-	MGH 53
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.20633	55.9	-	FKYS01	87	6029	5703	5/19/16	2/21/17	Scaffold	SC	SAMEA2273883	GCA_900083635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/635/GCA_900083635.1_12082_2_19	-	2880STDY5682809
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.58461	56.6	-	MRXA01	120	4473	4236	3/31/17	4/6/17	Contig	FDA/CFSAN	SAMN06100275	GCA_002075425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/425/GCA_002075425.1_ASM207542v1	-	MOD1-Md5g
Lactobacillus salivarius	1624	PRJNA357984	357984	Terrabacteria group	Firmicutes	1.95544	32.8	-	NBED01	60	1955	1821	4/5/17	4/8/17	Scaffold	University College Cork	SAMN06163270	GCA_002079435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/435/GCA_002079435.1_ASM207943v1	-	L21
Moraxella catarrhalis	480	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	1.90912	41.6	-	LZDJ01	24	1798	1690	7/5/16	4/5/17	Scaffold	TAILORED-Treatment project	SAMN05213945	GCA_001679105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/105/GCA_001679105.1_ASM167910v1	-	CCUG 18283
Mycobacterium abscessus 3A-0930-S	1001719	PRJNA65167	65167	Terrabacteria group	Actinobacteria	5.24999	64.1	-	AKVC01	12	5352	5251	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00672652	GCA_000270725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/725/GCA_000270725.1_ASM27072v1	-	3A-0930-S
Bifidobacterium breve MCC 1094	1365963	PRJNA215978	215978	Terrabacteria group	Actinobacteria	2.32721	59	-	AWFS01	23	2077	1899	8/11/15	4/3/17	Scaffold	"Food Science and Technology Institute, Morinaga Milk Industry Co., Ltd"	SAMN03978802	GCA_001264095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/095/GCA_001264095.1_ASM126409v1	26236711	MCC 1094
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.23438	36.7	-	LPSR01	7	2357	2197	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305179	GCA_001560765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/765/GCA_001560765.1_NG05B_CO5_12	-	NG05B_CO5_12
Vibrio sp. B183	1526762	PRJNA256191	256191	Proteobacteria	Gammaproteobacteria	5.58008	45.1	-	JPQB01	52	5169	4990	8/15/14	4/9/17	Scaffold	UMBC	SAMN02941064	GCA_000740665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/665/GCA_000740665.1_ASM74066v1	25237023	B183
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.66004	64.2	-	DBGD01	91	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450326	GCA_002295365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/365/GCA_002295365.1_ASM229536v1	28894102	-
Aeromonas hydrophila	644	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.67151	61.6	-	JVDL01	101	4286	4118	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197725	GCA_001055245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/245/GCA_001055245.1_ASM105524v1	26230489	53_AHYD
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.55277	67.1	-	LOVD01	146	6877	6452	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449193	GCA_001525855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/855/GCA_001525855.1_ASM152585v1	-	MSMB1158
Flavobacterium psychrophilum	96345	PRJEB21067	396411	FCB group	Bacteroidetes/Chlorobi group	2.68874	32.4	-	FYCZ01	44	2419	2339	7/29/17	8/7/17	Contig	INRA	SAMEA104126818	GCA_900186665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/665/GCA_900186665.1_LM-02-Fp_V1	-	LM-02-Fp
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.80956	47.6	-	MEAL01	109	3551	3373	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320413	GCA_001883525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/525/GCA_001883525.1_ASM188352v1	-	5-Mar
Pectobacterium carotovorum subsp. carotovorum	555	PRJNA269224	269224	Proteobacteria	Gammaproteobacteria	3.88478	51.3	-	JUJI01	30	3470	3281	12/29/14	12/29/14	Scaffold	Beijing Academy of Agriculture and Forestry Sciences	SAMN03252604	GCA_000808415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/415/GCA_000808415.1_ASM80841v1	-	YC T1
Lactobacillus crispatus CTV-05	440496	PRJNA36325	36325	Terrabacteria group	Firmicutes	2.36458	36	-	ADML01	25	2431	2248	10/29/10	1/9/14	Scaffold	Broad Institute	SAMN02463723	GCA_000165885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/165/885/GCA_000165885.1_ASM16588v1	-	CTV-05
Gardnerella vaginalis 6420LIT	698953	PRJNA42439	42439	Terrabacteria group	Actinobacteria	0.543852	43.2	-	ADEO01	3	382	369	5/21/12	11/6/13	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393776	GCA_000263455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/455/GCA_000263455.1_ASM26345v1	-	6420LIT
Lactobacillus paracasei	1597	PRJNA350891	350891	Terrabacteria group	Firmicutes	2.93687	46.3	-	NCSN01	41	3098	2827	5/18/17	5/24/17	Contig	"Teagasc, Moorepark"	SAMN05949321	GCA_002148875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/875/GCA_002148875.1_ASM214887v1	-	DPC2071
Streptococcus oralis subsp. oralis	1891914	PRJNA304678	304678	Terrabacteria group	Firmicutes	2.01685	41.3	-	NCUQ01	10	1983	1886	4/18/17	4/21/17	Contig	Slagelse Hospital	SAMN06705618	GCA_002096575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/575/GCA_002096575.1_ASM209657v1	27325438	OD_321121_09
Klebsiella variicola	244366	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.07525	56.6	-	JVDU01	487	6202	5667	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197716	GCA_001076525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/525/GCA_001076525.1_ASM107652v1	26230489	521_SSON
Pseudoalteromonas sp. 13-15	1761891	PRJEB18306	355725	Proteobacteria	Gammaproteobacteria	4.09997	39.8	-	FSRF01	2	3758	3588	12/14/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05878071	GCA_900141965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/965/GCA_900141965.1_IMG-taxon_2703719062_annotated_assembly	-	13-15
Leuconostoc gelidum subsp. gasicomitatum LMG 18811	762550	PRJEA48123	48123	Terrabacteria group	Firmicutes	1.95408	36.7	chromosome:NC_014319.1/FN822744.1	-	1	1961	1846	6/30/10	4/7/17	Complete Genome	"The Department of Food Hygiene and Environmental Health, University of Helsinki, P.O. Box 66 00014 University of Helsinki"	SAMEA2272393	GCA_000196855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/855/GCA_000196855.1_ASM19685v1	21571876	type strain: LMG 18811
Enterobacter asburiae	61645	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.467	54.9	-	BEFB01	200	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089481	GCA_002334005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/005/GCA_002334005.1_ASM233400v1	-	TUM10688
Pseudomonas amygdali pv. lachrymans	53707	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	6.12154	57.8	-	LJQP01	512	6003	6003	10/20/15	10/20/15	Scaffold	University of Toronto	SAMN03976245	GCA_001400475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/475/GCA_001400475.1_PlaICMP3507	-	ICMP3507
Acinetobacter pittii	48296	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.80181	38.9	-	LLDN01	123	3775	3542	11/5/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145644	GCA_001433125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/125/GCA_001433125.1_ASM143312v1	-	ABBL033
Citrobacter freundii	546	PRJNA252011	252011	Proteobacteria	Gammaproteobacteria	5.16916	51.6	-	JRSV01	214	5175	4882	10/26/15	4/4/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02872766	GCA_001412725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/725/GCA_001412725.1_ASM141272v1	25501822	RU2 LB26
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.25301	54.8	-	JZZD01	127	5179	4937	3/19/15	3/25/17	Contig	JCVI	SAMN03283674	GCA_000957015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/015/GCA_000957015.1_ASM95701v1	-	35661
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.14982	54.9	-	LDBA01	33	5088	4876	5/21/15	4/6/17	Contig	JCVI	SAMN03495936	GCA_001011375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/375/GCA_001011375.1_ASM101137v1	-	GN02154
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.91398	64.1	-	FSGI01	18	4840	4696	12/14/16	3/21/17	Contig	SC	SAMEA2070597	GCA_900135235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/235/GCA_900135235.1_10625_4_36	-	36
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.73938	66.5	-	LOUK01	124	8141	7690	1/21/16	4/4/17	Contig	Northern Arizona University	SAMN03449172	GCA_001525965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/965/GCA_001525965.1_ASM152596v1	-	INT3-BP132
Streptococcus sobrinus DSM 20742 = ATCC 33478	1123317	PRJNA179259	179259	Terrabacteria group	Firmicutes	2.0962	43.5	-	AOCE01	283	2035	2016	3/21/13	6/4/14	Contig	Institute of Bioprocess and Biosystems Engineering	SAMN02469963	GCA_000347935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/935/GCA_000347935.1_DSM20742_V1	23805886	DSM 20742
Pseudomonas sp. URIL14HWK12:I7	1283285	PRJNA186464	186464	Proteobacteria	Gammaproteobacteria	6.88333	60.7	-	AZVP01	78	6254	6065	1/3/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02597220	GCA_000514275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/275/GCA_000514275.1_ASM51427v1	-	URIL14HWK12:I7
Streptomyces sp. PsTaAH-124	1157638	PRJNA169758	169758	Terrabacteria group	Actinobacteria	8.80886	73	-	AREJ01	53	7674	7312	4/19/13	5/19/17	Scaffold	DOE Joint Genome Institute	SAMN02441038	GCA_000373685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/685/GCA_000373685.1_ASM37368v1	-	PsTaAH-124
Acinetobacter sp. neg1	1561068	PRJNA266754	266754	Proteobacteria	Gammaproteobacteria	3.91781	41.2	-	JSZD01	27	3663	3545	12/1/14	4/6/17	Scaffold	IBBE Istituto di biomembrane e bioenergetica	SAMN03105795	GCA_000788125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/125/GCA_000788125.1_ac.159.2	-	neg1
Flavobacterium sp. UBA807	1946561	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.39931	36.5	-	DBIH01	288	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451074	GCA_002296885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/885/GCA_002296885.1_ASM229688v1	28894102	-
Klebsiella sp. NFIX24	1566174	PRJEB17903	353821	Proteobacteria	Gammaproteobacteria	5.28423	58.1	-	FPKE01	20	5195	4958	11/17/16	2/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159400	GCA_900119465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/465/GCA_900119465.1_IMG-taxon_2603880211_annotated_assembly	-	NFIX24
Bacillus sp. UNC69MF	1449047	PRJNA234898	234898	Terrabacteria group	Firmicutes	3.8706	46.5	-	JQKM01	24	3847	3680	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02745536	GCA_000746035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/035/GCA_000746035.1_ASM74603v1	-	UNC69MF
Clostridium sp. NCR	1538552	PRJNA259160	259160	Terrabacteria group	Firmicutes	3.61841	28.1	-	JQHY01	56	3512	3371	10/6/14	4/9/17	Contig	Anand Agricultural University	SAMN03002484	GCA_000764005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/005/GCA_000764005.1_ASM76400v1	26484236	NCR
Sphingomonas sp. MEA3-1	1647414	PRJNA282354	282354	Proteobacteria	Alphaproteobacteria	6.85126	64.0662	plasmid pMEA01:NZ_CM003352.1/CM003352.1; plasmid pMEA02:NZ_CM003353.1/CM003353.1; plasmid pMEA03:NZ_CM003354.1/CM003354.1; plasmid pMEA04:NZ_CM003355.1/CM003355.1; plasmid pMEA05:NZ_CM003356.1/CM003356.1; plasmid pMEA06:NZ_CM003357.1/CM003357.1; plasmid pMEA07:NZ_CM003358.1/CM003358.1	LECE01	272	6741	6274	7/7/15	4/10/17	Contig	Nanjing Agriculture university	SAMN03753718	GCA_001047295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/295/GCA_001047295.1_ASM104729v1	24605783	MEA3-1
Synechococcus sp. Tous	1910958	PRJNA342151	342151	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.79167	52.6	-	MRUD01	46	1989	1925	2/24/17	2/24/17	Contig	Universidad Miguel Hernandez	SAMN05915836	GCA_002006815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/815/GCA_002006815.1_ASM200681v1	-	-
Rhodococcus sp. 1163	1905289	PRJNA344704	344704	Terrabacteria group	Actinobacteria	4.45798	62.3	-	MKKX01	43	4099	3953	4/13/17	4/17/17	Contig	University of Tasmania	SAMN05831618	GCA_002091985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/985/GCA_002091985.1_ASM209198v1	-	1163
Enterobacter sp. BIDMC87	1686395	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.93558	55.3	-	LETK01	7	4831	4549	6/19/15	4/10/17	Scaffold	Broad Institute	SAMN03280187	GCA_001037755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/755/GCA_001037755.1_Ente_cloa_complex_BIDMC87_V1	-	BIDMC87
Staphylococcus sp. HMSC068H12	1739329	PRJNA299979	299979	Terrabacteria group	Firmicutes	2.61788	33	-	LTFG01	85	2557	2392	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477639	GCA_001811885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/885/GCA_001811885.1_ASM181188v1	-	HMSC068H12
Corynebacterium sp. HMSC055A01	1715083	PRJNA296211	296211	Terrabacteria group	Actinobacteria	2.81838	60.9	-	LTJU01	82	2708	2548	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477504	GCA_001809405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/405/GCA_001809405.1_ASM180940v1	-	HMSC055A01
Arthrobacter sp. UNC362MFTsu5.1	1449044	PRJNA234823	234823	Terrabacteria group	Actinobacteria	5.09978	65.8	-	JMLE01	68	4731	4536	5/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743368	GCA_000685965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/965/GCA_000685965.1_ASM68596v1	-	UNC362MFTsu5.1
Bradyrhizobium sp. UFLA03-84	418599	PRJNA400693	400693	Proteobacteria	Alphaproteobacteria	8.62893	64.1	-	NSJY01	21	8094	7816	9/11/17	9/13/17	Contig	Universidade Federal de Lavras	SAMN07572887	GCA_002289535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/535/GCA_002289535.1_ASM228953v1	-	UFLA03-84
Streptococcus sp. HMSC076H09	1739322	PRJNA299972	299972	Terrabacteria group	Firmicutes	1.95424	35.2	-	LTFL01	29	1965	1886	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477632	GCA_001811765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/765/GCA_001811765.1_ASM181176v1	-	HMSC076H09
Mycobacterium sp. H070	1720571	PRJNA294421	294421	Terrabacteria group	Actinobacteria	4.56242	64.4	-	LJYN01	173	4438	4299	11/6/15	4/11/17	Contig	US EPA	SAMN04091149	GCA_001440185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/185/GCA_001440185.1_ASM144018v1	-	H070
Prevotella sp. P6B1	1410613	PRJNA223449	223449	FCB group	Bacteroidetes/Chlorobi group	3.61367	47.6	-	JNKF01	18	2981	2883	6/11/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841184	GCA_000702825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/825/GCA_000702825.1_ASM70282v1	-	P6B1
Enterococcus sp. Marseille-P2817	1852364	PRJEB16349	349292	Terrabacteria group	Firmicutes	2.12393	38.5	-	FNVY01	4	2047	1947	10/27/16	4/13/17	Contig	URMITE	SAMEA4519250	GCA_900104595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/595/GCA_900104595.1_PRJEB16349	-	Marseille-P2817
Treponema sp. UBA4328	1947727	PRJNA348753	348753	Spirochaetes	Spirochaetia	1.91775	43.5	-	DGTU01	193	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453639	GCA_002394465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/465/GCA_002394465.1_ASM239446v1	28894102	-
Methylobacterium sp. UNC378MF	1502748	PRJEB16173	348946	Proteobacteria	Alphaproteobacteria	6.35802	69.3	-	FMWU01	77	6077	5761	10/20/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02799622	GCA_900103195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/195/GCA_900103195.1_IMG-taxon_2590828861_annotated_assembly	-	UNC378MF
uncultured Eubacterium sp.	165185	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.64817	47.8	-	FMDZ01	29	2361	2316	8/16/16	8/16/16	Scaffold	SC	SAMEA3545284	GCA_900066305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/305/GCA_900066305.1_13414_6_60	-	-
Paenibacillus sp. TCA20	1499968	PRJDB2870	254958	Terrabacteria group	Firmicutes	5.63142	45.7	-	BBIW01	33	5237	5011	7/9/14	4/9/17	Contig	Toyo University	SAMD00017271	GCA_000732325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/325/GCA_000732325.1_ASM73232v1	25189580	TCA20
Alcanivorax sp. UBA4488	1945989	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.42561	66.2	-	DGNQ01	224	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455147	GCA_002388995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/995/GCA_002388995.1_ASM238899v1	28894102	-
Thioalkalivibrio sp. ARh5	1158183	PRJNA185230	185230	Proteobacteria	Gammaproteobacteria	2.76838	66.2	-	ARMO01	8	2694	2582	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440492	GCA_000381805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/805/GCA_000381805.1_ASM38180v1	-	ARh5
Bacteroides sp. CAG:144	1262736	PRJEB720	206635	FCB group	Bacteroidetes/Chlorobi group	2.46752	45.6	-	CBBJ01	97	2147	2103	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138598	GCA_000434215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/215/GCA_000434215.1_MGS144	-	-
Prochlorococcus sp. scB241_529D18	1471464	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.51145	31.4	-	JFLO01	170	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671335	GCA_000634175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/175/GCA_000634175.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. BCW_4322	1903587	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.80666	30.2	-	MJYB01	67	1898	1726	10/4/16	4/13/17	Scaffold	University of California at Davis	SAMN03358049	GCA_001763095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/095/GCA_001763095.1_ASM176309v1	-	BCW_4322
Neisseria sp. HMSC070H10	1715085	PRJNA296213	296213	Proteobacteria	Betaproteobacteria	2.17171	49.3	-	LTOV01	45	2138	1983	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498603	GCA_001837635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/635/GCA_001837635.1_ASM183763v1	-	HMSC070H10
Rhizobium sp. AAP43	1523420	PRJNA255553	255553	Proteobacteria	Alphaproteobacteria	4.8754	60.4	-	LJHS01	69	4556	4454	9/22/15	4/11/17	Contig	"Institute of Microbiology, ASCR"	SAMN02925445	GCA_001296045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/045/GCA_001296045.1_ASM129604v1	-	AAP43
Chryseobacterium sp. P1-3	1517683	PRJNA253967	253967	FCB group	Bacteroidetes/Chlorobi group	4.62876	37	-	JPEQ01	45	4069	3119	8/7/14	2/3/15	Contig	Kyungpook National University	SAMN02898319	GCA_000738495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/495/GCA_000738495.1_Chry1.0	25428979	P1-3
Mesorhizobium sp. L2C067A000	1287106	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.69478	62.5	-	AYWY01	87	6635	6123	12/3/13	4/9/17	Contig	University of Southern California	SAMN02359656	GCA_000502855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/855/GCA_000502855.1_Mloti_L2C067A000	-	L2C067A000
Xanthomonas translucens pv. translucens	134875	PRJNA326107	326107	Proteobacteria	Gammaproteobacteria	4.5943	66.2	-	MADR01	1131	-	-	8/18/16	8/18/16	Scaffold	The Connecticut Agricultural Experiment Station	SAMN05258389	GCA_001707145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/145/GCA_001707145.1_XTT_AA	-	SLV-2
Microbacterium sp. Root53	1736553	PRJNA297942	297942	Terrabacteria group	Actinobacteria	2.9109	71.9	-	LMFR01	26	2769	2646	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04155822	GCA_001426925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/925/GCA_001426925.1_Root53	26633631	Root53
Bacillus velezensis	492670	PRJNA289317	289317	Terrabacteria group	Firmicutes	3.86876	46.6	-	LGAT01	26	3814	3634	8/12/15	3/22/17	Contig	University Laval	SAMN03852606	GCA_001266825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/825/GCA_001266825.1_ASM126682v1	26450741	B26
Gilliamella apicola	1196095	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	3.13669	33.6	-	MZNF01	129	2869	2725	5/16/17	5/23/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603511	GCA_002141565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/565/GCA_002141565.1_ASM214156v1	-	A-2-24
Klebsiella michiganensis	1134687	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.73887	56	-	JUYQ01	264	5559	5253	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197850	GCA_001066775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/775/GCA_001066775.1_ASM106677v1	26230489	649_KOXY
Achromobacter sp. 2789STDY5608628	1806493	PRJEB4659	263108	Proteobacteria	Betaproteobacteria	7.00563	68	-	CYTT01	81	6559	6316	9/19/15	4/11/17	Scaffold	SC	SAMEA2247593	GCA_001299435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/435/GCA_001299435.1_11861_6_21	-	2789STDY5608628
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.71541	51	-	MPRR01	61	2658	2566	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016289	GCA_002021175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/175/GCA_002021175.1_ASM202117v1	-	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.87375	56.9	-	FXNL01	109	6009	5657	4/28/17	5/6/17	Scaffold	SC	SAMEA2609381	GCA_900180495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/495/GCA_900180495.1_14893_8_76	-	3189STDY5864741
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.75258	32.3	-	FQMW01	14	2726	2555	11/24/16	4/5/17	Contig	SC	SAMEA3449140	GCA_900127075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/075/GCA_900127075.1_17175_3_84	-	3688STDY6125138
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.5738	67.7	-	LPME01	110	6915	6570	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449664	GCA_001533885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/885/GCA_001533885.1_ASM153388v1	-	MSMB808WGS
Xanthomonas axonopodis pv. manihotis str. UG27	1185709	PRJNA163813	163813	Proteobacteria	Gammaproteobacteria	4.90334	65.1	-	AKEX01	131	4364	4040	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090354	GCA_000266505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/505/GCA_000266505.1_UG27	22699502	UG27
Xanthomonas axonopodis pv. manihotis str. UG28	1185710	PRJNA163815	163815	Proteobacteria	Gammaproteobacteria	4.72273	65.1	-	AKEY01	676	4447	3748	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090355	GCA_000266525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/525/GCA_000266525.1_UG28	22699502	UG28
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.5697	67.7	-	LPMF01	96	6913	6572	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449665	GCA_001533905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/905/GCA_001533905.1_ASM153390v1	-	MSMB809WGS
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79454	32.3	-	FQMZ01	14	2802	2626	11/24/16	4/6/17	Contig	SC	SAMEA3449142	GCA_900127085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/085/GCA_900127085.1_17175_3_86	-	3688STDY6125140
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.56063	57.5	-	FXNF01	85	5596	5267	4/28/17	5/6/17	Scaffold	SC	SAMEA2609371	GCA_900180565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/565/GCA_900180565.1_14936_2_75	-	3189STDY5864929
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.70836	51	-	MPRT01	66	2661	2567	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016291	GCA_002021185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/185/GCA_002021185.1_ASM202118v1	-	-
Achromobacter sp. AR476-2	1631616	PRJNA316622	316622	Proteobacteria	Betaproteobacteria	6.51522	65.1	-	LWDT01	57	6046	5920	5/6/16	4/12/17	Scaffold	PROIMI	SAMN04588820	GCA_001639685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/685/GCA_001639685.1_ASM163968v1	-	AR476-2
Klebsiella michiganensis	1134687	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.85325	55.9	-	JUYF01	572	5790	5346	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197861	GCA_001066805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/805/GCA_001066805.1_ASM106680v1	26230489	659_KOXY
Gilliamella apicola	1196095	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	3.00338	34.2	-	MZNH01	655	2703	2488	5/16/17	5/23/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603513	GCA_002141575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/575/GCA_002141575.1_ASM214157v1	-	AM6
Bacillus velezensis	492670	PRJNA295358	295358	Terrabacteria group	Firmicutes	3.88167	46.4	-	LJJY01	15	3861	3672	11/6/15	3/22/17	Contig	Hubei Academy of Agricultural Sciences	SAMN04046537	GCA_001440465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/465/GCA_001440465.1_ASM144046v1	-	NBIF-003
Microbacterium sp. Root553	1736556	PRJNA297942	297942	Terrabacteria group	Actinobacteria	3.54426	68.9	-	LMFY01	4	3387	3297	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04155825	GCA_001426995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/995/GCA_001426995.1_Root553	26633631	Root553
Xanthomonas translucens pv. undulosa	487909	PRJNA326107	326107	Proteobacteria	Gammaproteobacteria	4.48272	67.9	-	MADV01	1678	-	-	8/18/16	8/18/16	Scaffold	The Connecticut Agricultural Experiment Station	SAMN05258786	GCA_001707235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/235/GCA_001707235.1_UPB513	-	UPB513
Mesorhizobium sp. L2C084A000	1287116	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.64838	62.5	-	AYWX01	78	6553	6091	12/3/13	4/9/17	Contig	University of Southern California	SAMN02359657	GCA_000502875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/875/GCA_000502875.1_Mloti_L2C084A000	-	L2C084A000
Chryseobacterium sp. SCN 40-13	1660093	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	4.86458	39.7	-	MEDR01	246	4653	4288	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652437	GCA_001724115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/115/GCA_001724115.1_ASM172411v1	26031303	-
Rhizobium sp. Leaf202	1735675	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.78525	58.3	-	LMKD01	15	4460	4346	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151681	GCA_001421235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/235/GCA_001421235.1_Leaf202	26633631	Leaf202
Neisseria sp. HMSC078C12	1715075	PRJNA296203	296203	Proteobacteria	Betaproteobacteria	2.24221	49.6	-	LTOB01	47	2192	2051	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498659	GCA_001838065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/065/GCA_001838065.1_ASM183806v1	-	HMSC078C12
Campylobacter sp. BCW_4323	1903588	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.73688	30.3	-	MJYC01	88	1814	1629	10/4/16	4/13/17	Scaffold	University of California at Davis	SAMN03358050	GCA_001763115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/115/GCA_001763115.1_ASM176311v1	-	BCW_4323
Prochlorococcus sp. scB243_495D8	1471469	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.22785	31.4	-	JFLT01	211	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671340	GCA_000634195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/195/GCA_000634195.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Bacteroides sp. CAG:530	1262741	PRJEB921	206733	FCB group	Bacteroidetes/Chlorobi group	3.36642	42.9	-	CBCL01	126	2712	2669	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138624	GCA_000434735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/735/GCA_000434735.1_MGS530	-	-
Thioalkalivibrio sp. ALJT	1158146	PRJNA185231	185231	Proteobacteria	Gammaproteobacteria	2.65931	65.8	-	ARMP01	21	2516	2387	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441660	GCA_000381825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/825/GCA_000381825.1_ASM38182v1	-	ALJT
Alcanivorax sp. UBA4485	1945988	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.3433	64.6	-	DGNT01	224	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456368	GCA_002389055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/055/GCA_002389055.1_ASM238905v1	28894102	-
Paenibacillus sp. P1XP2	1472719	PRJNA240914	240914	Terrabacteria group	Firmicutes	5.84104	53.5	-	JRNV01	186	5575	4020	11/26/14	4/9/17	Contig	Microbial Gene Research and Resources facility	SAMN02680274	GCA_000787385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/385/GCA_000787385.1_ASM78738v1	-	P1XP2
uncultured Eubacterium sp.	165185	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.69366	43.3	-	FMDW01	39	2621	2569	8/16/16	8/16/16	Scaffold	SC	SAMEA3545338	GCA_900066555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/555/GCA_900066555.1_13470_2_91	-	-
Methylobacterium sp. 275MFSha3.1	1502746	PRJEB15689	347448	Proteobacteria	Alphaproteobacteria	6.5394	71	-	FNWP01	69	6133	5897	10/27/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02799636	GCA_900108435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/435/GCA_900108435.1_IMG-taxon_2590828857_annotated_assembly	-	275MFSha3.1
Treponema sp. UBA4313	1947724	PRJNA348753	348753	Spirochaetes	Spirochaetia	3.14343	44.6	-	DGUJ01	325	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453088	GCA_002394625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/625/GCA_002394625.1_ASM239462v1	28894102	-
Enterococcus sp. 255_ESPC	1579344	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.11186	37.2	-	JVOE01	157	3207	3031	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197446	GCA_001056095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/095/GCA_001056095.1_ASM105609v1	26230489	255_ESPC
Mycobacterium sp. H079	1720572	PRJNA294421	294421	Terrabacteria group	Actinobacteria	5.72656	63.9	-	LJYO01	94	5759	5483	11/6/15	4/11/17	Contig	US EPA	SAMN04091150	GCA_001440205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/205/GCA_001440205.1_ASM144020v1	26798093	H079
Streptococcus sp. HMSC073D05	1739336	PRJNA299986	299986	Terrabacteria group	Firmicutes	2.02288	41.9	-	LTEZ01	25	1974	1885	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477645	GCA_001812015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/015/GCA_001812015.1_ASM181201v1	-	HMSC073D05
Bradyrhizobium sp. OK095	1882760	PRJEB16888	350996	Proteobacteria	Alphaproteobacteria	7.84612	63.9	-	FOBX01	51	7417	7204	10/29/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443254	GCA_900109945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/945/GCA_900109945.1_IMG-taxon_2687453685_annotated_assembly	-	OK095
Arthrobacter sp. MWB30	1534409	PRJNA257946	257946	Terrabacteria group	Actinobacteria	4.64701	63	-	JPZK01	58	4359	4247	12/31/14	4/10/17	Contig	Korea Basic Science Institute	SAMN02980920	GCA_000812065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/065/GCA_000812065.1_ASM81206v1	25700396	MWB30
Corynebacterium sp. HMSC074C11	1715093	PRJNA296221	296221	Terrabacteria group	Actinobacteria	2.45696	58.7	-	LTJR01	23	2165	2063	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477509	GCA_001809455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/455/GCA_001809455.1_ASM180945v1	-	HMSC074C11
Staphylococcus sp. HMSC065E07	1739335	PRJNA299985	299985	Terrabacteria group	Firmicutes	2.55724	33.7	-	LTFA01	22	2429	2339	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477644	GCA_001812005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/005/GCA_001812005.1_ASM181200v1	-	HMSC065E07
Enterobacter sp. BIDMC93	1686396	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.70101	55.6	-	LETL01	1	4474	4290	6/19/15	4/10/17	Scaffold	Broad Institute	SAMN03280188	GCA_001037805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/805/GCA_001037805.1_Ente_cloa_complex_BIDMC93_V1	-	BIDMC93
Rhodococcus sp. Br-6	1522141	PRJDB5044	335882	Terrabacteria group	Actinobacteria	5.49648	68.7	-	BDIV01	23	5139	5012	4/15/17	5/6/17	Contig	Chiba University	SAMD00056695	GCA_002117895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/895/GCA_002117895.1_ASM211789v1	-	Br-6
Synechococcus sp. Lanier	1910957	PRJNA342151	342151	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.47574	51.4	-	MWMJ01	79	1647	1590	5/19/17	5/19/17	Contig	Universidad Miguel Hernandez	SAMN05915837	GCA_002151525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/525/GCA_002151525.1_ASM215152v1	-	-
Sphingomonas sp. Leaf11	1735678	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	3.76583	66.9	-	LMKG01	7	3494	3390	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151580	GCA_001421285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/285/GCA_001421285.1_Leaf11	26633631	Leaf11
Clostridium sp. CL-6	1499683	PRJEB6474	251848	Terrabacteria group	Firmicutes	4.32518	32.2	-	CCXK01	17	4114	3907	9/18/14	4/10/17	Contig	URMITE	SAMEA2697681	GCA_000821305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/305/GCA_000821305.1_Clostridium_culturomicsense	-	-
Bacillus sp. UNC322MFChir4.1	1449045	PRJNA234888	234888	Terrabacteria group	Firmicutes	4.95585	35.9	-	JQKQ01	63	5105	4771	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02745492	GCA_000746135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/135/GCA_000746135.1_ASM74613v1	-	UNC322MFChir4.1
Klebsiella sp. NFIX56	1566183	PRJEB17906	353824	Proteobacteria	Gammaproteobacteria	5.43906	57.9	-	FPJQ01	33	5320	5093	11/17/16	2/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159364	GCA_900119505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/505/GCA_900119505.1_IMG-taxon_2600255307_annotated_assembly	-	NFIX56
Flavobacterium sp. UBA2787	1946543	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.72942	33.8	-	DEHZ01	17	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06457880	GCA_002352205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/205/GCA_002352205.1_ASM235220v1	28894102	-
Acinetobacter sp. Leaf130	1736269	PRJNA297956	297956	Proteobacteria	Gammaproteobacteria	4.04586	38.5	-	LMOE01	12	3882	3701	11/2/15	4/6/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151649	GCA_001423205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/205/GCA_001423205.1_Leaf130	26633631	Leaf130
Streptomyces sp. CNQ766	1169157	PRJNA175192	175192	Terrabacteria group	Actinobacteria	8.47458	73.6	-	ARHR01	87	7217	6986	4/22/13	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440453	GCA_000377105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/105/GCA_000377105.1_ASM37710v1	-	CNQ766
Pseudomonas sp. LAIL14HWK12:I6	1259806	PRJNA179477	179477	Proteobacteria	Gammaproteobacteria	5.59778	62.1	-	AZVQ01	25	5179	5014	1/3/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02597221	GCA_000514295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/295/GCA_000514295.1_ASM51429v1	-	LAIL14HWK12:I6
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.60714	66.8	-	LOYH01	116	7932	7514	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449290	GCA_001526205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/205/GCA_001526205.1_ASM152620v1	-	MSMB1302
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.45603	64	-	FVPZ01	33	5556	5378	3/10/17	3/18/17	Contig	SC	SAMEA1966577	GCA_900137935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/935/GCA_900137935.1_10660_1_45	-	542
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.0414	55.1	-	LDAY01	56	4998	4780	5/21/15	4/6/17	Contig	JCVI	SAMN03495934	GCA_001011385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/385/GCA_001011385.1_ASM101138v1	-	GN02079
Enterobacter hormaechei subsp. hormaechei	301105	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.11272	54.8	-	JZZC01	108	5054	4807	3/19/15	3/25/17	Contig	JCVI	SAMN03283654	GCA_000957025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/025/GCA_000957025.1_ASM95702v1	-	35666
Citrobacter freundii	546	PRJNA252011	252011	Proteobacteria	Gammaproteobacteria	5.33552	51.5	-	JRSY01	251	5412	5075	10/26/15	4/4/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02872769	GCA_001412735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/735/GCA_001412735.1_ASM141273v1	25501822	RU2 LB29
Acinetobacter pittii	48296	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.07148	38.9	-	LLDW01	318	4039	3758	11/5/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145653	GCA_001433185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/185/GCA_001433185.1_ASM143318v1	-	ABBL042
Pseudomonas amygdali pv. mori	34065	PRJNA292453	292453	Proteobacteria	Gammaproteobacteria	5.81834	57.8	-	LJQU01	619	5681	5681	10/20/15	10/20/15	Scaffold	University of Toronto	SAMN03976273	GCA_001400525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/525/GCA_001400525.1_PmoICMP4331	-	ICMP4331
Sulfolobus acidocaldarius DSM 639	330779	PRJNA13935	13935	TACK group	Crenarchaeota	2.22596	36.7	chromosome:NC_007181.1/CP000077.1	-	1	2331	2243	7/5/05	3/29/17	Complete Genome	Danish Archaea Centre	SAMN02603173	GCA_000012285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/285/GCA_000012285.1_ASM1228v1	15995215	DSM 639
Halobacteriovorax marinus SJ	862908	PRJNA50431	50431	Proteobacteria	Oligoflexia	3.43791	36.6997	chromosome:NC_016620.1/FQ312005.1; plasmid pBMS1:NC_019100.1/HE610506.1	-	2	3307	3254	7/23/10	4/17/17	Complete Genome	Wellcome Trust Sanger Institute	SAMEA3138385	GCA_000210915.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/915/GCA_000210915.2_ASM21091v2	22955231	SJ
Pseudoalteromonas sp. JB197	1434839	PRJEB19049	374425	Proteobacteria	Gammaproteobacteria	3.99207	40	-	FUKV01	132	3635	3426	2/11/17	5/31/17	Contig	MICALIS	SAMEA81154918	GCA_900163875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/875/GCA_900163875.1_ASM90016387v1	-	JB197
Klebsiella variicola	244366	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.08711	56.6	-	JVDR01	369	6147	5764	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197719	GCA_001076915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/915/GCA_001076915.1_ASM107691v1	26230489	524_SBOY
Streptococcus oralis subsp. oralis	1891914	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.97249	41.3	-	NCUS01	31	2009	1884	4/18/17	4/21/17	Contig	Slagelse Hospital	SAMN06705616	GCA_002096605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/605/GCA_002096605.1_ASM209660v1	27325438	B_19836_11
Acinetobacter nosocomialis	106654	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.12026	38.7	-	DDGU01	178	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06457061	GCA_002352835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/835/GCA_002352835.1_ASM235283v1	28894102	-
Lactobacillus paracasei	1597	PRJNA377610	377610	Terrabacteria group	Firmicutes	3.07857	46.3	-	NCSP01	35	3205	2931	5/18/17	5/24/17	Contig	"Teagasc, Moorepark"	SAMN06463780	GCA_002148885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/885/GCA_002148885.1_ASM214888v1	-	DPC4536
Lactobacillus crispatus 2029	1381118	PRJNA213996	213996	Terrabacteria group	Firmicutes	2.19312	36.9	-	AVFH02	295	2648	2501	9/13/13	3/5/14	Contig	Kingston Uniiversity	SAMN02298797	GCA_000466885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/885/GCA_000466885.2_ASM46688v2	24558253	2029
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.81019	47.6	-	MEAK01	81	3602	3426	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320412	GCA_001883535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/535/GCA_001883535.1_ASM188353v1	-	Feb-00
Flavobacterium psychrophilum	96345	PRJEB21067	396411	FCB group	Bacteroidetes/Chlorobi group	2.75597	32.3	-	FYCW01	47	2499	2416	7/29/17	8/7/17	Contig	INRA	SAMEA104126817	GCA_900186685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/685/GCA_900186685.1_LM-01-Fp_V1	-	LM-01-Fp
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.72743	67.1	-	LOVE01	141	6975	6573	1/21/16	6/26/17	Contig	Northern Arizona University	SAMN03449194	GCA_001525885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/885/GCA_001525885.1_ASM152588v1	-	MSMB1160
Aeromonas hydrophila	644	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.70016	61.6	-	JVFM01	72	4347	4136	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197672	GCA_001056955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/955/GCA_001056955.1_ASM105695v1	26230489	48_AHYD
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.50984	62.9	-	DBGF01	67	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450328	GCA_002295785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/785/GCA_002295785.1_ASM229578v1	28894102	-
Vibrio sp. ZF57	1840084	PRJNA318805	318805	Proteobacteria	Gammaproteobacteria	4.8517	44.5	-	MAKD01	142	4260	4067	7/21/16	4/13/17	Scaffold	Massachusetts Institute of Technology	SAMN04867924	GCA_001691235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/235/GCA_001691235.1_ASM169123v1	-	ZF57
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.21633	36.7	-	LPSS01	4	2335	2227	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305180	GCA_001560795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/795/GCA_001560795.1_NG05B_CO5_13	-	NG05B_CO5_13
Bifidobacterium breve MCC 1340	1365966	PRJNA215981	215981	Terrabacteria group	Actinobacteria	2.37311	58.6	-	AWFT01	23	2081	1899	8/11/15	4/3/17	Scaffold	"Food Science and Technology Institute, Morinaga Milk Industry Co., Ltd"	SAMN03978803	GCA_001264105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/105/GCA_001264105.1_ASM126410v1	26236711	MCC 1340
Mycobacterium abscessus 4S-0206	1001723	PRJNA65175	65175	Terrabacteria group	Actinobacteria	4.84939	64.2	-	AKUT01	10	4852	4738	6/19/12	3/18/17	Contig	Institute for Genome Sciences	SAMN00728580	GCA_000270745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/745/GCA_000270745.2_ASM27074v2	-	4S-0206
Moraxella catarrhalis	480	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	1.83034	41.7	-	LZYD01	10	1699	1607	7/5/16	4/5/17	Scaffold	TAILORED-Treatment project	SAMN05219449	GCA_001679345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/345/GCA_001679345.1_ASM167934v1	-	CCUG 57283
Lactobacillus salivarius	1624	PRJNA357984	357984	Terrabacteria group	Firmicutes	1.92751	32.7	-	NBEG01	46	1932	1811	4/5/17	4/8/17	Scaffold	University College Cork	SAMN06163267	GCA_002079465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/465/GCA_002079465.1_ASM207946v1	-	JCM 1045
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.45485	56.8	-	MRXD01	135	4399	4132	3/31/17	4/6/17	Contig	FDA/CFSAN	SAMN06100267	GCA_002075435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/435/GCA_002075435.1_ASM207543v1	-	MOD1-Md35s
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.25308	54.8	-	FKZL01	68	6097	5827	5/19/16	2/21/17	Scaffold	SC	SAMEA2273756	GCA_900083645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/645/GCA_900083645.1_12082_5_20	-	2880STDY5682681
Enterobacter cloacae UCI 29	1400148	PRJNA219279	219279	Proteobacteria	Gammaproteobacteria	4.95878	54.7	-	JMUV01	12	4854	4629	5/19/14	4/10/17	Scaffold	Broad Institute	SAMN02356609	GCA_000692355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/355/GCA_000692355.1_Ente_cloa_UCI_29_V1	-	UCI 29
Proteus mirabilis	584	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.93472	38.8	-	JVTO01	351	3651	3456	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197306	GCA_001061595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/595/GCA_001061595.1_ASM106159v1	26230489	1326_PMIR
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.61149	32.5	-	CUFS01	117	2593	2443	3/31/15	3/26/17	Contig	SC	SAMEA1035095	GCA_001232065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/065/GCA_001232065.1_7068_7_22	-	W114
Propionibacterium acnes HL043PA2	765073	PRJNA49177	49177	Terrabacteria group	Actinobacteria	2.53259	60.2	-	ADYM01	39	2586	2439	7/30/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189216	GCA_000144755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/755/GCA_000144755.1_ASM14475v1	-	HL043PA2
Burkholderia sp. RF2-non_BP3	1637844	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.36725	66.4	-	LOSU01	79	6814	6477	1/21/16	4/11/17	Contig	Northern Arizona University	SAMN03449127	GCA_001522185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/185/GCA_001522185.1_ASM152218v1	-	RF2-non_BP3
Campylobacter coli 59-2	887283	PRJNA52703	52703	Proteobacteria	delta/epsilon subdivisions	1.76301	31.1	-	AIND01	140	1851	1736	3/16/12	3/15/17	Contig	Cornell University	SAMN02429022	GCA_000253835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/835/GCA_000253835.2_ASM25383v2	-	59-2
Mannheimia haemolytica	75985	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.67268	41	-	LQDZ01	81	2771	2608	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366521	GCA_001930325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/325/GCA_001930325.1_ASM193032v1	-	2428MH
Lactobacillus plantarum subsp. plantarum ATCC 14917 = JCM 1149 = CGMCC 1.2437	525338	PRJNA222257	222257	Terrabacteria group	Firmicutes	3.20891	44.5	-	AZEJ01	48	3111	2962	11/6/15	3/27/17	Scaffold	Shanghai Majorbio	SAMN02369435	GCA_001434175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/434/175/GCA_001434175.1_ASM143417v1	26415554	CGMCC 1.2437
Serratia marcescens PH1a	1416761	PRJNA226213	226213	Proteobacteria	Gammaproteobacteria	5.24384	59.2	-	AYMT01	56	5039	4858	4/18/14	3/24/17	Contig	University of Malaya	SAMN02729853	GCA_000633555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/555/GCA_000633555.1_de_novo	-	PH1a
Chlamydia abortus	83555	PRJEB17758	386127	PVC group	Chlamydiae	1.26578	40.9	-	FPME01	122	1178	1047	5/10/17	5/24/17	Scaffold	WTSI	SAMEA1903260	GCA_900119045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/045/GCA_900119045.1_9471_4_70	-	162STDY5437303
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.0449	41.6	-	JJQG01	172	3490	3271	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708957	GCA_000979915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/915/GCA_000979915.1_gtlEnvA5udCFS	25756680	1.H.A.1A.1
Yersinia enterocolitica	630	PRJNA359164	359164	Proteobacteria	Gammaproteobacteria	4.78201	47.1	-	MSPN01	86	4468	4185	1/5/17	3/28/17	Contig	"Istituto Zooprofilattico Sperimentale del Piemonte, Liguria e Valle d'Aosta"	SAMN06187702	GCA_001936535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/535/GCA_001936535.1_ASM193653v1	-	wildboar1
Mycoplasma pneumoniae	2104	PRJNA267612	267612	Terrabacteria group	Tenericutes	0.802079	39.9	-	JTGX01	44	781	683	12/2/15	4/4/17	Scaffold	Capital Institute of Pediatrics	SAMN03142254	GCA_001455625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/625/GCA_001455625.1_ASM145562v1	-	CIP12311
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.49572	53.6	-	MKYM01	27	2450	2253	12/6/16	8/3/17	Contig	Institute for Medical Research	SAMN05877636	GCA_001889845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/845/GCA_001889845.1_ASM188984v1	28254972	rz319
Bordetella bronchiseptica CARE970018BB	1331204	PRJNA202116	202116	Proteobacteria	Betaproteobacteria	5.24019	68.2	-	JGWS01	121	5039	4840	5/12/14	4/2/17	Contig	JCVI	SAMN02263910	GCA_000690375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/375/GCA_000690375.1_gbb08v01	25908122	CARE970018BB
Formosa sp. Hel1_33_131	1336794	PRJNA328568	328568	FCB group	Bacteroidetes/Chlorobi group	2.73516	36.6	chromosome:NZ_CP017260.1/CP017260.1	-	1	2564	2488	9/20/16	4/13/17	Complete Genome	"Ernst Moritz Arndt University of Greifswald, Institute of Pharmacy"	SAMN05375114	GCA_001735745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/735/745/GCA_001735745.1_ASM173574v1	-	Hel1_33_131
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31229	57.2358	chromosome 1:NZ_CP018482.1/CP018482.1; chromosome 2:NZ_CP018483.1/CP018483.1	-	2	3373	3142	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932986	GCA_002191855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/855/GCA_002191855.1_ASM219185v1	28388689	BwIM_BGR_21
Lactobacillus rhamnosus	47715	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.96074	46.6	-	JUWG01	166	3001	2813	7/10/15	4/3/17	Contig	University of Washington	SAMN03197912	GCA_001067025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/025/GCA_001067025.1_ASM106702v1	26230489	708_LRHA
Pasteurella multocida	747	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	2.46513	40.3	-	NBTJ01	3	2430	2276	4/10/17	4/13/17	Contig	US Food and Drug Administration 	SAMN04875587	GCA_002083205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/205/GCA_002083205.1_ASM208320v1	-	FDAARGOS_261
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12788	41.2	-	CWCX01	80	2046	1877	6/23/15	3/26/17	Contig	SC	SAMEA1032800	GCA_001175785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/785/GCA_001175785.1_6903_6_1	-	EQUI0146
Stenotrophomonas maltophilia	40324	PRJNA285410	285410	Proteobacteria	Gammaproteobacteria	4.77082	66.9	-	LDVT01	242	4470	4277	8/31/15	3/26/17	Contig	University of Queensland	SAMN03753638	GCA_001276185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/185/GCA_001276185.1_ASM127618v1	-	C11
Bacillus amyloliquefaciens	1390	PRJNA245180	245180	Terrabacteria group	Firmicutes	4.10728	46.1	-	JMEG01	186	4026	3623	5/28/14	6/24/14	Contig	Kingston Uniiversity	SAMN02732238	GCA_000696285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/285/GCA_000696285.1_ASM69628v1	24948774	B1895
Chlamydia psittaci	83554	PRJNA312248	312248	PVC group	Chlamydiae	1.17831	38.9605	plasmid unnamed:NZ_CM007183.1/CM007183.1	LZRE01	8	1048	994	9/20/16	4/5/17	Contig	University of the Sunshine Coast	SAMN04496847	GCA_001736055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/736/055/GCA_001736055.1_ASM173605v1	-	Ho Re upper
Enterococcus faecium TX1337RF	1134802	PRJNA81993	81993	Terrabacteria group	Firmicutes	2.68674	38.1	-	AMAA01	47	2676	2532	8/27/12	3/27/17	Scaffold	Washington University	SAMN02299478	GCA_000294345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/345/GCA_000294345.2_ASM29434v2	-	TX1337RF
Neisseria gonorrhoeae SK29471	1352513	PRJNA209376	209376	Proteobacteria	Betaproteobacteria	2.0683	52.7	-	ATPW01	465	2480	2042	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02338799	GCA_001025865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/865/GCA_001025865.1_ASM102586v1	-	SK29471
Streptococcus mutans TCI-228	1074166	PRJNA72075	72075	Terrabacteria group	Firmicutes	1.86	36.9	-	AGLU01	109	1862	1761	10/6/11	3/22/17	Contig	JCVI	SAMN02436518	GCA_000229585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/585/GCA_000229585.2_SMUT6-NEX_34-228	-	TCI-228
Enterococcus faecalis T2	565637	PRJNA32917	32917	Terrabacteria group	Firmicutes	3.26383	37.2	-	ACAE01	22	3331	3164	6/11/09	3/22/17	Scaffold	Broad Institute	SAMN02595250	GCA_000157155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/155/GCA_000157155.1_ASM15715v1	-	T2
Brucella suis 06-791-1309	1388744	PRJNA217068	217068	Proteobacteria	Alphaproteobacteria	3.31552	57.2	-	AXMT01	11	3377	3150	10/24/13	4/2/17	Contig	Broad Institute	SAMN02334522	GCA_000480035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/035/GCA_000480035.1_Bruc_suis_06-791-1309_V1	-	06-791-1309
Candidatus Liberibacter asiaticus str. gxpsy	1174529	PRJNA158395	158395	Proteobacteria	Alphaproteobacteria	1.26824	36.6	chromosome:NC_020549.1/CP004005.1	-	1	1161	1082	3/14/13	4/17/17	Complete Genome	United States Department of Agriculture	SAMN02604078	GCA_000346595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/595/GCA_000346595.1_ASM34659v1	23640196	gxpsy
Clostridium botulinum C str. Eklund	445337	PRJNA20017	20017	Terrabacteria group	Firmicutes	2.96119	29	-	ABDQ01	76	2813	2601	7/11/07	3/22/17	Contig	J. Craig Venter Institute	SAMN02436293	GCA_000171095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/095/GCA_000171095.1_ASM17109v1	23516187	Eklund
Candidatus Midichloria mitochondrii IricVA	696127	PRJNA42125	42125	Proteobacteria	Alphaproteobacteria	1.18373	36.6	chromosome:NC_015722.1/CP002130.1	-	1	1378	1163	6/27/11	4/17/17	Complete Genome	Università degli Studi di Milano	SAMN02604106	GCA_000219355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/355/GCA_000219355.1_ASM21935v1	21690562	IricVA
Erysipelothrix rhusiopathiae str. Fujisawa	650150	PRJDA38421	38421	Terrabacteria group	Firmicutes	1.78794	36.6	chromosome:NC_015601.1/AP012027.1	-	1	1747	1643	5/31/11	4/7/17	Complete Genome	National Institute of Animal Health (Japan)	SAMD00060966	GCA_000270085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/085/GCA_000270085.1_ASM27008v1	21478354	Fujisawa
Vibrio parahaemolyticus	670	PRJNA275536	275536	Proteobacteria	Gammaproteobacteria	5.20754	45.2	-	JZAP01	121	5083	4814	3/23/15	3/25/17	Scaffold	Health Canada	SAMN03349604	GCA_000960665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/665/GCA_000960665.1_ASM96066v1	-	Aug-26
Streptococcus mitis	28037	PRJNA304678	304678	Terrabacteria group	Firmicutes	2.10728	39.8	-	NCVD01	51	2194	2026	4/18/17	4/21/17	Scaffold	Slagelse Hospital	SAMN06705605	GCA_002096765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/765/GCA_002096765.1_ASM209676v1	27325438	RH_777_07
Oenococcus oeni IOEB_L18_3	1428427	PRJNA229553	229553	Terrabacteria group	Firmicutes	1.73575	37.8	-	AZLO01	44	1767	1611	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02904297	GCA_000762125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/125/GCA_000762125.1_Oeoe_IOEB_L18_3_1.0	24901216	IOEB_L18_3
Xanthomonas oryzae pv. oryzae	64187	PRJNA269403	269403	Proteobacteria	Gammaproteobacteria	4.24235	63.9	-	JXDZ01	405	4235	3405	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252502	GCA_001927615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/615/GCA_001927615.1_ASM192761v1	-	BXO471
Campylobacter fetus subsp. venerealis	32020	PRJNA285150	285150	Proteobacteria	delta/epsilon subdivisions	1.86788	33	-	LRFA01	103	1931	1816	8/5/16	4/5/17	Contig	Utrecht University	SAMN04419584	GCA_001699745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/745/GCA_001699745.1_ASM169974v1	27333878	ADRI513
Xanthomonas citri subsp. citri	611301	PRJEB7155	306112	Proteobacteria	Gammaproteobacteria	5.23683	64.7	-	CCWJ01	51	4942	4867	12/16/15	12/16/15	Scaffold	Genoscope CEA	SAMEA2752264	GCA_001489275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/275/GCA_001489275.1_ASX_N_PRJEB7155_v1	-	-
Brucella abortus bv. 1 str. NI259	1051062	PRJNA74335	74335	Proteobacteria	Alphaproteobacteria	3.28244	57.2	-	AGVM01	4	3376	3164	2/3/12	3/23/17	Scaffold	Broad Institute	SAMN02596746	GCA_000245975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/975/GCA_000245975.1_Bruc_abor_bv1_NI259_V1	-	NI259
Francisella tularensis subsp. tularensis str. SCHU S4 substr. NR-10492	1341657	PRJNA217349	217349	Proteobacteria	Gammaproteobacteria	1.89483	32.3	-	JIDV01	2	1930	1666	4/11/14	4/2/17	Scaffold	Broad Institute	SAMN02335347	GCA_000629005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/005/GCA_000629005.1_Fran_tula_Schu_S4_NR-10492_V1	-	Schu S4 substr. NR-10492
Shigella boydii	621	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.92675	50.7	-	NQCA01	151	5302	4875	8/11/17	8/15/17	Contig	JCVI	SAMN07450628	GCA_002247825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/825/GCA_002247825.1_ASM224782v1	-	ECSW+11
Clostridioides difficile E9	1215077	PRJEB207	222745	Terrabacteria group	Firmicutes	4.15631	28.9	-	CAMU01	373	3946	3772	10/14/13	3/16/17	Scaffold	LPBA	SAMEA3138915	GCA_000531695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/695/GCA_000531695.1_E9	24482682	E9
Vibrio cholerae MZO-3	412883	PRJNA18261	18261	Proteobacteria	Gammaproteobacteria	4.13733	47.4	-	AAUU02	45	4031	3676	11/27/06	3/26/17	Scaffold	TIGR	SAMN02435869	GCA_000168935.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/935/GCA_000168935.3_ASM16893v3	-	MZO-3
Ralstonia solanacearum	305	PRJNA269725	269725	Proteobacteria	Betaproteobacteria	5.67154	66.6	-	JXAY01	145	5127	4795	5/16/16	4/5/17	Contig	University of Florida MREC	SAMN03256333	GCA_001644795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/795/GCA_001644795.1_ASM164479v1	-	CIP120
Bacillus thuringiensis serovar berliner ATCC 10792	527031	PRJNA29723	29723	Terrabacteria group	Firmicutes	6.26014	34.8	chromosome:NZ_CM000753.1/CM000753.1	ACNF01	1	13011	12511	4/30/09	6/15/17	Chromosome	Naval Medical Research Center	SAMN00738287	GCA_000161615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/615/GCA_000161615.1_ASM16161v1	22645259	ATCC 10792
Burkholderia mallei A188	1382517	PRJNA214255	214255	Proteobacteria	Betaproteobacteria	5.03271	68.6	-	AWGR01	172	5362	4942	1/31/14	4/4/17	Contig	Translational Genomics Research Institute	SAMN02303031	GCA_000565445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/445/GCA_000565445.2_BMA188	-	A188
Pseudopedobacter saltans DSM 12145	762903	PRJNA49337	49337	FCB group	Bacteroidetes/Chlorobi group	4.63524	36.6	chromosome:NC_015177.1/CP002545.1	-	1	3891	3790	3/1/11	9/3/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00103626	GCA_000190735.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/735/GCA_000190735.2_ASM19073v2	22180808	DSM 12145
Acetohalobium arabaticum DSM 5501	574087	PRJNA32769	32769	Terrabacteria group	Firmicutes	2.4696	36.6	chromosome:NC_014378.1/CP002105.1	-	1	2398	2274	8/5/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00016993	GCA_000144695.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/695/GCA_000144695.1_ASM14469v1	21304692	DSM 5501
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.79915	67	-	MUPX01	129	7454	7035	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001805	GCA_001991275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/275/GCA_001991275.1_ASM199127v1	-	VC5280
Lactobacillus reuteri	1598	PRJNA380292	380292	Terrabacteria group	Firmicutes	2.06291	38.5	-	NBBG01	93	2138	1930	4/27/17	5/3/17	Scaffold	University of Alberta	SAMN06640221	GCA_002112185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/185/GCA_002112185.1_ASM211218v1	28389535	1366
Bacteroides fragilis str. S38L3	1339331	PRJNA206174	206174	FCB group	Bacteroidetes/Chlorobi group	4.95506	43.2	-	JGEV01	40	4332	4087	3/20/14	4/4/17	Contig	IGS	SAMN02315069	GCA_000598765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/765/GCA_000598765.2_ASM59876v2	-	S38L3
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.69398	50.8	-	CXIA01	390	5300	4503	7/16/15	2/24/17	Contig	SC	SAMEA2004844	GCA_001256635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/635/GCA_001256635.1_8289_7_59	-	82541
Streptococcus uberis 0140J	218495	PRJNA353	353	Terrabacteria group	Firmicutes	1.85235	36.6	chromosome:NC_012004.1/AM946015.1	-	1	1873	1762	1/28/09	3/29/17	Complete Genome	Sanger Institute	SAMEA3138207	GCA_000009545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/545/GCA_000009545.1_ASM954v1	-	0140J
Bacillus licheniformis	1402	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.25551	46	-	NPCR01	280	4431	4255	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372720	GCA_002272395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/395/GCA_002272395.1_assembly-7709_v1	-	7709
Vibrio vulnificus	672	PRJNA281160	281160	Proteobacteria	Gammaproteobacteria	5.00399	46.6	-	MVKQ01	143	4593	4402	3/28/17	3/30/17	Contig	"Technische Universitaet Dresden, Medical Faculty 'Carl Gustav Carus'"	SAMN03483416	GCA_002073095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/095/GCA_002073095.1_ASM207309v1	-	VN-0101
Pseudomonas syringae pv. actinidiae str. CRAFRU8.43	1052681	PRJEA68659	68659	Proteobacteria	Gammaproteobacteria	6.14319	58.5	-	AFTG01	585	5807	5407	11/3/11	5/19/17	Contig	Università di Udine	SAMN02471300	GCA_000233815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/815/GCA_000233815.2_ASM23381v2	-	CRAFRU8.43
Streptococcus suis 6407	1214179	PRJNA171424	171424	Terrabacteria group	Firmicutes	2.24827	40.9	-	ALLE01	53	2258	2098	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469535	GCA_000440515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/515/GCA_000440515.1_version1	-	6407
Streptococcus agalactiae MC627	1333572	PRJNA203067	203067	Terrabacteria group	Firmicutes	2.07348	35.3	-	ATOT01	117	2129	2019	7/3/13	3/18/17	Scaffold	The Genome Institute	SAMN02436765	GCA_000419095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/095/GCA_000419095.2_S_agalactiaeMC627-1.0	-	MC627
Gramella forsetii KT0803	411154	PRJEA19061	19061	FCB group	Bacteroidetes/Chlorobi group	3.79847	36.6	chromosome:NC_008571.1/CU207366.1	-	1	3463	3368	11/6/06	4/17/17	Complete Genome	Max Planck Institute for Molecular Genetics	SAMEA2272667	GCA_000060345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/060/345/GCA_000060345.1_ASM6034v1	17107561	KT0803
Macrococcus caseolyticus JCSC5402	458233	PRJDA20209	20209	Terrabacteria group	Firmicutes	2.21974	36.5846	chromosome:NC_011999.1/AP009484.1; plasmid pMCCL1:NC_011995.1/AP009485.1; plasmid pMCCL2:NC_011996.1/AP009486.1; plasmid pMCCL3:NC_011997.1/AP009487.1; plasmid pMCCL4:NC_011998.1/AP009488.1; plasmid pMCCL5:NC_012000.1/AP009489.1; plasmid pMCCL6:NC_012001.1/AP009490.1; plasmid pMCCL7:NC_012002.1/AP009491.1; plasmid pMCCL8:NC_012003.1/AP009492.1	-	9	2332	2227	1/29/09	4/17/17	Complete Genome	Juntendo University School of Medicine	SAMD00060930	GCA_000010585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/585/GCA_000010585.1_ASM1058v1	19074389	JCSC5402
Bifidobacterium longum subsp. infantis	1682	PRJDB4597	325619	Terrabacteria group	Actinobacteria	2.64362	59.9	-	BCYG01	58	2380	2106	6/10/16	4/5/17	Contig	Yakult Central Institute	SAMD00047617	GCA_001686125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/125/GCA_001686125.1_ASM168612v1	27340092	IN-F29
Shigella flexneri 3a	424717	PRJNA279143	279143	Proteobacteria	Gammaproteobacteria	4.47509	50.5	-	LAJP01	422	4937	4084	7/21/15	8/8/17	Contig	U.S. Food and Drug Administration	SAMN03438034	GCA_001184055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/055/GCA_001184055.1_ASM118405v1	-	BS1038
Bacillus anthracis	1392	PRJNA286154	286154	Terrabacteria group	Firmicutes	5.50329	35.263	chromosome:NZ_CP012519.1/CP012519.1; plasmid pXO1:NZ_CP012520.1/CP012520.1; plasmid pXO2:NZ_CP012521.1/CP012521.1	-	3	6133	5730	9/2/15	3/26/17	Chromosome	Bundeswehr Insitute of Microbiology	SAMN03765650	GCA_001277955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/955/GCA_001277955.1_ASM127795v1	-	Larissa
Pseudomonas putida	303	PRJNA316053	316053	Proteobacteria	Gammaproteobacteria	6.56391	62	-	LWDW01	93	6029	5818	4/25/16	4/5/17	Contig	Zhejiang University of Technology	SAMN04574078	GCA_001630725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/630/725/GCA_001630725.1_ASM163072v1	-	JQ581
Leptospira interrogans str. MMD3731	1049934	PRJNA74161	74161	Spirochaetes	Spirochaetia	4.59169	35	-	AHOL02	38	4096	3747	1/24/12	5/18/17	Contig	J. Craig Venter Institute	SAMN02436498	GCA_000244695.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/695/GCA_000244695.3_gls454177v02	-	MMD3731
Stanieria sp. NIES-3757	1807358	PRJDB4607	313903	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.46331	36.5525	chromosome:AP017375.1; plasmid plasmid1:AP017376.1	-	2	4970	4917	3/5/16	3/5/16	Complete Genome	"Environment and Life Sciences, Toyohashi University of Technology"	SAMD00047668	GCA_002355455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/455/GCA_002355455.1_ASM235545v1	-	NIES-3757
Ferroplasma acidiphilum	74969	PRJNA316151	316151	Euryarchaeota	Thermoplasmata	1.82694	36.5	chromosome:NZ_CP015363.1/CP015363.1	-	1	1840	1764	4/4/17	4/5/17	Complete Genome	Max Planck Institute for Chemical Ecology	SAMN03952737	GCA_002078355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/355/GCA_002078355.1_ASM207835v1	-	Y
Elizabethkingia meningoseptica	238	PRJNA326741	326741	FCB group	Bacteroidetes/Chlorobi group	3.87312	36.5	chromosome:NZ_CP016376.1/CP016376.1	-	1	3484	3406	3/6/17	3/8/17	Complete Genome	CDC	SAMN05281841	GCA_002022105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/105/GCA_002022105.1_ASM202210v1	-	G4076
Streptococcus pneumoniae PNI0007	1159089	PRJNA89181	89181	Terrabacteria group	Firmicutes	2.07118	39.7	-	AKRC01	162	2315	2030	1/29/13	3/9/17	Scaffold	Washington University	SAMN02299525	GCA_000334675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/675/GCA_000334675.1_ASM33467v1	-	PNI0007
Erysipelothrix rhusiopathiae	1648	PRJNA331066	331066	Terrabacteria group	Firmicutes	1.77806	36.5	chromosome:NZ_CP017116.1/CP017116.1	-	1	1741	1643	9/13/16	4/13/17	Complete Genome	Huazhong Agricultural University	SAMN05437124	GCA_001723625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/625/GCA_001723625.1_ASM172362v1	-	WH13013
Erysipelothrix rhusiopathiae	1648	PRJNA315595	315595	Terrabacteria group	Firmicutes	1.87649	36.5	chromosome:NZ_CP014861.1/CP014861.1	-	1	1838	1723	3/30/16	4/12/17	Complete Genome	Guangxi Veterinary Research Institute	SAMN04566196	GCA_001602155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/155/GCA_001602155.1_ASM160215v1	27222802	GXBY-1
Haemophilus influenzae	727	PRJNA285221	285221	Proteobacteria	Gammaproteobacteria	1.83103	38	-	LFFS01	34	1813	1701	7/21/15	3/26/17	Contig	University of Oklahoma Health Sciences Center	SAMN03702708	GCA_001184515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/515/GCA_001184515.1_ASM118451v1	26404588	HI2116
Mycobacterium bovis	1765	PRJNA342251	342251	Terrabacteria group	Actinobacteria	4.24528	65.6	-	MINA01	159	4202	3939	9/15/16	4/5/17	Contig	Réseau français de Santé Animale	SAMN05725038	GCA_001726085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/085/GCA_001726085.1_ASM172608v1	-	D-10-02315
Mycobacterium avium subsp. avium 11-4751	1391992	PRJNA216926	216926	Terrabacteria group	Actinobacteria	4.83538	69.2	-	AYOB01	577	4744	3514	12/9/13	4/2/17	Contig	National Animal Disease Center	SAMN02470596	GCA_000505015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/015/GCA_000505015.1_MAA_4751_version_1	-	Nov-51
Clostridium perfringens	1502	PRJNA327455	327455	Terrabacteria group	Firmicutes	3.58037	27.9	-	MASC01	68	3367	3158	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323904	GCA_001949725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/725/GCA_001949725.1_ASM194972v1	28062388	JFP981
Xanthomonas campestris pv. leeana	487874	PRJNA298610	298610	Proteobacteria	Gammaproteobacteria	5.00075	64.6	-	LOJY01	92	4484	4088	3/6/17	3/9/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN04145203	GCA_002019165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/165/GCA_002019165.1_ASM201916v1	-	LMG9048
Lactococcus lactis subsp. cremoris	1359	PRJNA257540	257540	Terrabacteria group	Firmicutes	2.67994	35.6	-	JQIC01	16	2589	2348	10/1/14	4/10/17	Contig	"Institute of Biomedical Informatics, National Yang Ming University"	SAMN02953047	GCA_000805435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/435/GCA_000805435.1_A17_version_1_W50_B98_	25676767	A17
Bacillus cereus BGSC 6E1	526970	PRJNA29651	29651	Terrabacteria group	Firmicutes	5.73018	35	chromosome:NZ_CM000716.1/CM000716.1	ACLU01	1	11917	11391	4/30/09	5/18/17	Chromosome	Naval Medical Research Center	SAMN00727655	GCA_000160915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/915/GCA_000160915.1_ASM16091v1	22645259	BGSC 6E1
Staphylococcus epidermidis NIHLM008	979217	PRJNA62383	62383	Terrabacteria group	Firmicutes	2.44954	32	-	AKHA01	45	2398	2239	7/9/12	3/23/17	Contig	NISC - NIH Intramural Sequencing Center	SAMN00993290	GCA_000276185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/185/GCA_000276185.1_ASM27618v1	-	NIHLM008
Ferroplasma acidarmanus fer1	333146	PRJNA239	239	Euryarchaeota	Thermoplasmata	1.93521	36.5	chromosome:NC_021592.1/CP004145.1	-	1	1950	1879	6/26/13	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02604346	GCA_000152265.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/265/GCA_000152265.2_ASM15226v2	17267615	fer1
Yersinia pestis 14735	1345709	PRJNA208259	208259	Proteobacteria	Gammaproteobacteria	4.69375	47.7	-	AYLS01	29	4504	4209	7/29/15	3/26/17	Scaffold	Los Alamos National Laboratory	SAMN03943539	GCA_001188325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/325/GCA_001188325.1_YPY_1	26383663	14735
Pseudomonas fluorescens	294	PRJNA262952	262952	Proteobacteria	Gammaproteobacteria	6.10709	59.9	-	JRYA01	97	5543	5359	12/16/14	4/2/17	Contig	"University of Michigan, Ann Arbor"	SAMN03092897	GCA_000801895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/895/GCA_000801895.1_PfAU14705	25635025	AU14705
Fluviicola taffensis DSM 16823	755732	PRJNA47603	47603	FCB group	Bacteroidetes/Chlorobi group	4.63358	36.5	chromosome:NC_015321.1/CP002542.1	-	1	4082	4005	3/31/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713599	GCA_000194605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/605/GCA_000194605.1_ASM19460v1	22180807	DSM 16823
Bacillus cellulosilyticus DSM 2522	649639	PRJNA38423	38423	Terrabacteria group	Firmicutes	4.68167	36.5	chromosome:NC_014829.1/CP002394.1	-	1	4337	4188	12/27/10	6/15/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00007429	GCA_000177235.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/235/GCA_000177235.2_ASM17723v2	-	DSM 2522
Candidatus Liberibacter asiaticus str. psy62	537021	PRJNA29835	29835	Proteobacteria	Alphaproteobacteria	1.22733	36.5	chromosome:NC_012985.3/CP001677.5	-	1	1115	1027	7/17/09	3/30/17	Complete Genome	"Horticultural Research Laboratory, USDA-ARS"	SAMN02603311	GCA_000023765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/765/GCA_000023765.2_ASM2376v2	"1,958,907,621,784,900"	psy62
Bacillus weihaiensis	1547283	PRJNA323409	323409	Terrabacteria group	Firmicutes	4.36128	36.4944	chromosome:NZ_CP016020.1/CP016020.1; plasmid unnamed:NZ_CP016021.1/CP016021.1	-	2	4207	3993	12/5/16	4/16/17	Complete Genome	"Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences"	SAMN05178567	GCA_001889165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/165/GCA_001889165.1_ASM188916v1	27901120	Alg07
Bacillus endophyticus	135735	PRJNA280147	280147	Terrabacteria group	Firmicutes	5.31398	36.4535	chromosome:NZ_CP011974.1/CP011974.1; plasmid pBEH1:NZ_CP015323.1/CP015323.1; plasmid pBEH2:NZ_CP015324.1/CP015324.1; plasmid pBEH3:NZ_CP015325.1/CP015325.1; plasmid pBEH4:NZ_CP015326.1/CP015326.1; plasmid pBEH5:NZ_CP015327.1/CP015327.1; plasmid pBEH6:NZ_CP015328.1/CP015328.1; plasmid pBEH7:NZ_CP015329.1/CP015329.1; plasmid pBEH8:NZ_CP015330.1/CP015330.1	-	9	5345	5105	7/6/15	4/12/17	Complete Genome	Tianjin University	SAMN03457172	GCA_000972245.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/245/GCA_000972245.3_ASM97224v3	26248285	Hbe603
Brochothrix thermosphacta	2756	PRJNA407213	407213	Terrabacteria group	Firmicutes	2.64779	36.4	chromosome:CP023483.1	-	1	2557	2413	9/27/17	9/27/17	Complete Genome	USDA/ARS/Eastern Regional Research Center	SAMN07634393	GCA_002381265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/265/GCA_002381265.1_ASM238126v1	-	BI
Pseudomonas fluorescens	294	PRJNA262950	262950	Proteobacteria	Gammaproteobacteria	5.8219	60.4	-	JRYP01	24	5355	5191	12/16/14	4/10/17	Contig	"University of Michigan, Ann Arbor"	SAMN03092895	GCA_000801915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/915/GCA_000801915.1_PfAU12271	-	AU12271
Yersinia pestis	632	PRJNA288602	288602	Proteobacteria	Gammaproteobacteria	4.74586	47.7	-	LFXP01	4	4526	4258	8/6/15	3/26/17	Scaffold	Los Alamos National Laboratory	SAMN03817042	GCA_001261975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/975/GCA_001261975.1_YPW_8_IHQD	26383662	KIM 10v
Listeria welshimeri	1643	PRJEB6403	251923	Terrabacteria group	Firmicutes	2.81414	36.4	chromosome 1:NZ_LT906444.1/LT906444.1	-	1	2877	2741	8/15/17	8/28/17	Complete Genome	SC	SAMEA4534872	GCA_900187315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/315/GCA_900187315.1_52087_C01	-	NCTC11857
Staphylococcus epidermidis NIHLM015	979216	PRJNA62381	62381	Terrabacteria group	Firmicutes	2.44636	32.1	-	AKGZ01	43	2403	2253	7/9/12	3/23/17	Contig	NISC - NIH Intramural Sequencing Center	SAMN00993292	GCA_000276205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/205/GCA_000276205.1_ASM27620v1	-	NIHLM015
Bacillus cereus 172560W	526967	PRJNA29645	29645	Terrabacteria group	Firmicutes	5.69954	34.8	chromosome:NZ_CM000717.1/CM000717.1	ACLV01	1	11719	11276	4/30/09	6/15/17	Chromosome	Naval Medical Research Center	SAMN00727633	GCA_000160935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/935/GCA_000160935.1_ASM16093v1	22645259	172560W
Lactococcus lactis subsp. lactis	1360	PRJDB3260	273820	Terrabacteria group	Firmicutes	2.54579	35.2	-	BBSI01	88	2597	2363	1/27/15	4/3/17	Contig	Kirin	SAMD00023525	GCA_000835975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/835/975/GCA_000835975.1_ASM83597v1	-	JCM 5805
Xanthomonas campestris pv. thespesiae	487892	PRJNA298609	298609	Proteobacteria	Gammaproteobacteria	4.99678	64.6	-	LOJU01	93	4478	4084	3/6/17	3/9/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN04145202	GCA_002019195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/195/GCA_002019195.1_ASM201919v1	-	LMG9057
Clostridium perfringens	1502	PRJNA327456	327456	Terrabacteria group	Firmicutes	3.67056	28	-	MASD01	62	3405	3218	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323905	GCA_001949735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/735/GCA_001949735.1_ASM194973v1	28062388	JFP982
Mycobacterium avium subsp. avium 2285 (S)	1299329	PRJNA191793	191793	Terrabacteria group	Actinobacteria	5.51731	68.1	-	JAOD01	7	5240	4229	1/27/14	4/10/17	Contig	Institute for Genome Sciences	SAMN02641609	GCA_000523595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/595/GCA_000523595.1_ASM52359v1	-	2285 (S)
Mycobacterium bovis	1765	PRJNA362881	362881	Terrabacteria group	Actinobacteria	4.29593	65.6	-	MTZR01	146	4240	3995	3/14/17	4/27/17	Contig	Réseau français de Santé Animale	SAMN06250727	GCA_002026285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/285/GCA_002026285.1_ASM202628v1	-	D11-00843
Haemophilus influenzae	727	PRJNA285219	285219	Proteobacteria	Gammaproteobacteria	1.77473	37.9	-	LFFT01	41	1766	1649	7/21/15	3/26/17	Contig	University of Oklahoma Health Sciences Center	SAMN03702706	GCA_001184535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/535/GCA_001184535.1_ASM118453v1	26404588	HI1974
Candidatus Liberibacter asiaticus	34021	PRJNA376787	376787	Proteobacteria	Alphaproteobacteria	1.22516	36.4	chromosome:NZ_CP019958.1/CP019958.1	-	1	1120	1040	7/12/17	7/14/17	Complete Genome	"Crop Diseases, Pests, Genetics Research Unit, San Joaquin Valley Agricultural Sciences Center"	SAMN06446703	GCA_002216815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/815/GCA_002216815.1_ASM221681v1	-	JXGC
Elizabethkingia meningoseptica	238	PRJNA326741	326741	FCB group	Bacteroidetes/Chlorobi group	4.00476	36.4	chromosome:NZ_CP016378.1/CP016378.1	-	1	3630	3519	3/6/17	3/8/17	Complete Genome	CDC	SAMN05281842	GCA_002022145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/145/GCA_002022145.1_ASM202214v1	-	G4120
Streptococcus pneumoniae PNI0008	1159090	PRJNA89183	89183	Terrabacteria group	Firmicutes	2.04234	39.8	-	AKRD01	125	2282	2029	1/29/13	3/9/17	Scaffold	Washington University	SAMN02299526	GCA_000334695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/695/GCA_000334695.1_ASM33469v1	-	PNI0008
Formosa sp. Hel3_A1_48	1336795	PRJNA328569	328569	FCB group	Bacteroidetes/Chlorobi group	2.01645	36.4	chromosome:NZ_CP017259.1/CP017259.1	-	1	1842	1786	9/20/16	4/13/17	Complete Genome	"Ernst Moritz Arndt University of Greifswald, Institute of Pharmacy"	SAMN05375122	GCA_001735715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/735/715/GCA_001735715.1_ASM173571v1	-	Hel3_A1_48
Enterococcus silesiacus	332949	PRJNA226735	226735	Terrabacteria group	Firmicutes	3.92814	36.4	chromosome:CP013614.1	-	1	3627	3559	12/10/15	12/10/15	Complete Genome	Gateway Technical College	SAMN04296138	GCA_001465115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/465/115/GCA_001465115.1_ASM146511v1	-	LMG 23085
Candidatus Liberibacter asiaticus	34021	PRJNA239529	239529	Proteobacteria	Alphaproteobacteria	1.23351	36.4	chromosome:NZ_CP010804.1/CP010804.1	-	1	1122	1030	10/22/15	4/17/17	Complete Genome	"Crop Diseases, Pests, Genetics Research Unit San Joaquin Valley Agricultural Sciences Center, USDA"	SAMN02665901	GCA_000590865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/865/GCA_000590865.2_ASM59086v2	24723715	A4
Leptospira interrogans serovar Grippotyphosa str. Andaman	1193018	PRJNA167223	167223	Spirochaetes	Spirochaetia	4.93742	35.1	-	AKXG02	80	4522	4056	10/17/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436576	GCA_000306075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/075/GCA_000306075.2_gls454009v2.0	-	Andaman
Pseudomonas putida	303	PRJNA312605	312605	Proteobacteria	Gammaproteobacteria	6.12063	63.7	-	LUCV01	73	5550	5382	5/16/16	4/5/17	Contig	University of Houston	SAMN04500978	GCA_001644955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/955/GCA_001644955.1_CBF10-2	-	CBF10-2
Bacillus anthracis 8903-G	1412843	PRJNA224562	224562	Terrabacteria group	Firmicutes	5.50477	35.2647	chromosome:NZ_CM002401.1/CM002401.1; plasmid pXO1:NZ_CM002402.1/CM002402.1; plasmid pXO2:NZ_CM002403.1/CM002403.1	AZUD01	3	6132	5729	2/5/14	3/24/17	Chromosome	"Center for Microbial Genetics and Genomics, Northern Arizona University"	SAMN02951868	GCA_000558965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/965/GCA_000558965.1_Ba8903G_1.0	-	8903-G
Shigella flexneri 6	424719	PRJNA279143	279143	Proteobacteria	Gammaproteobacteria	4.46878	50.8	-	LAJR01	501	4976	4160	7/21/15	8/8/17	Contig	U.S. Food and Drug Administration	SAMN03438036	GCA_001184065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/065/GCA_001184065.1_ASM118406v1	-	BS1040
Bifidobacterium longum subsp. longum	1679	PRJDB4597	325619	Terrabacteria group	Actinobacteria	2.43747	60	-	BCYH01	77	2144	1964	6/10/16	4/5/17	Contig	Yakult Central Institute	SAMD00047618	GCA_001686145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/145/GCA_001686145.1_ASM168614v1	27340092	LO-06
Erysipelothrix rhusiopathiae SY1027	1313290	PRJNA195586	195586	Terrabacteria group	Firmicutes	1.75291	36.4	chromosome:NC_021354.1/CP005079.1	-	1	1716	1378	6/3/13	4/8/17	Complete Genome	Nanjing Agricultural University Bioinformatics Center	SAMN05771124	GCA_000404205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/205/GCA_000404205.1_ASM40420v1	24993343	SY1027
Listeria welshimeri serovar 6b str. SLCC5334	386043	PRJNA13443	13443	Terrabacteria group	Firmicutes	2.81413	36.4	chromosome:NC_008555.1/AM263198.1	-	1	2877	2737	10/25/06	2/26/17	Complete Genome	Universitat Giessen	SAMEA3138260	GCA_000060285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/060/285/GCA_000060285.1_ASM6028v1	16936040	SLCC5334
Streptococcus agalactiae MC626	1333571	PRJNA203066	203066	Terrabacteria group	Firmicutes	2.03745	35.1	-	ATOU01	59	2087	1993	7/3/13	3/18/17	Scaffold	The Genome Institute	SAMN02436896	GCA_000419115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/115/GCA_000419115.2_S_agalactiaeMC626-1.0	-	MC626
Streptococcus suis 8074	1214182	PRJNA171425	171425	Terrabacteria group	Firmicutes	2.05903	41.2	-	ALLF01	102	2095	1941	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469536	GCA_000440535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/535/GCA_000440535.1_version1	-	8074
Pseudomonas syringae pv. actinidiae str. NCPPB 3739	1052682	PRJEA68663	68663	Proteobacteria	Gammaproteobacteria	5.9279	58.8	-	AFTH01	815	5778	5180	11/3/11	5/19/17	Contig	Università di Udine	SAMN02471302	GCA_000233835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/835/GCA_000233835.2_ASM23383v2	-	NCPPB 3739
Vibrio vulnificus	672	PRJNA281277	281277	Proteobacteria	Gammaproteobacteria	4.86707	46.7	-	MVKR01	144	4493	4288	3/28/17	3/30/17	Contig	"Technische Universitaet Dresden, Medical Faculty 'Carl Gustav Carus'"	SAMN03486854	GCA_002073105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/105/GCA_002073105.1_ASM207310v1	-	VN-0104
Bacillus licheniformis	1402	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.25514	45.8	-	NPCM01	70	4453	4307	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372714	GCA_002272455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/455/GCA_002272455.1_assembly-7701_v1	-	7701
Prochlorococcus marinus subsp. marinus str. CCMP1375	167539	PRJNA419	419	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.75108	36.4	chromosome:NC_005042.1/AE017126.1	-	1	1930	1882	7/25/03	8/3/16	Complete Genome	CNRS	SAMN02603142	GCA_000007925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/925/GCA_000007925.1_ASM792v1	12917486	CCMP1375; SS120
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.63998	50.7	-	CXHB01	392	5215	4445	7/16/15	2/24/17	Contig	SC	SAMEA1324229	GCA_001256775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/775/GCA_001256775.1_7655_8_6	-	H112620255
Bacteroides fragilis str. I1345	1339270	PRJNA206101	206101	FCB group	Bacteroidetes/Chlorobi group	5.31774	43.5	-	JGEW01	76	4723	4464	3/20/14	4/4/17	Contig	IGS	SAMN02314404	GCA_000598785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/785/GCA_000598785.2_ASM59878v2	-	I1345
Lactobacillus reuteri	1598	PRJNA380292	380292	Terrabacteria group	Firmicutes	2.03566	38.7	-	NBBH01	181	2144	1876	4/27/17	5/3/17	Scaffold	University of Alberta	SAMN06640219	GCA_002112195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/195/GCA_002112195.1_ASM211219v1	28389535	M27U15
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.99469	67	-	MUPW01	120	7622	7222	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001804	GCA_001991295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/295/GCA_001991295.1_ASM199129v1	-	VC5018
Methanohalobium evestigatum Z-7303	644295	PRJNA37945	37945	Euryarchaeota	Methanomicrobia	2.40623	36.3956	chromosome:NC_014253.1/CP002069.1; plasmid pMETEV01:NC_014254.1/CP002070.1	-	2	2396	2267	6/15/10	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN00015125	GCA_000196655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/655/GCA_000196655.1_ASM19665v1	-	Z-7303
Capnocytophaga canimorsus	28188	PRJNA369395	369395	FCB group	Bacteroidetes/Chlorobi group	2.41427	36.3	chromosome:NZ_CP022382.1/CP022382.1	-	1	2137	2046	9/14/17	9/16/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06289152	GCA_002302565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/565/GCA_002302565.1_ASM230256v1	-	7120
Burkholderia mallei A193	1382518	PRJNA214255	214255	Proteobacteria	Betaproteobacteria	5.09839	68.6	-	AWGS01	185	5346	4937	1/31/14	4/2/17	Contig	Translational Genomics Research Institute	SAMN02303032	GCA_000565465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/465/GCA_000565465.1_BMA193	-	A193
Bacillus thuringiensis serovar andalousiensis BGSC 4AW1	527032	PRJNA29725	29725	Terrabacteria group	Firmicutes	5.48884	35.1	chromosome:NZ_CM000754.1/CM000754.1	ACNG01	1	11663	11094	4/30/09	5/18/17	Chromosome	Naval Medical Research Center	SAMN00727678	GCA_000161635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/635/GCA_000161635.1_ASM16163v1	22645259	BGSC 4AW1
Ralstonia solanacearum	305	PRJNA243370	243370	Proteobacteria	Betaproteobacteria	5.64802	66.4	-	JIBY01	530	5247	4580	5/16/16	4/5/17	Contig	University of Florida MREC	SAMN02716068	GCA_001644805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/805/GCA_001644805.1_P597Contigs4.0	-	P597
Vibrio cholerae HC-40A1	991961	PRJNA63929	63929	Proteobacteria	Gammaproteobacteria	4.03178	47.5	-	AFOK01	203	3838	3664	7/26/11	3/22/17	Scaffold	Institute for Genome Sciences	SAMN00222983	GCA_000221345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/345/GCA_000221345.1_ASM22134v1	-	HC-40A1
Clostridioides difficile T61	1215086	PRJEB216	222732	Terrabacteria group	Firmicutes	4.07144	28.7	-	CAND01	82	3739	3603	10/14/13	3/15/17	Scaffold	LPBA	SAMEA3138916	GCA_000531715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/715/GCA_000531715.1_T61	-	T61
Shigella boydii	621	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.1674	50.6	-	NQCK01	136	5417	5016	8/11/17	8/15/17	Contig	JCVI	SAMN07450678	GCA_002247945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/945/GCA_002247945.1_ASM224794v1	-	ECH+05
Francisella tularensis	263	PRJNA244566	244566	Proteobacteria	Gammaproteobacteria	1.85927	32.3	-	JOVO01	1	1912	1628	8/19/14	4/2/17	Scaffold	Los Alamos National Laboratory	SAMN02887095	GCA_000741935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/935/GCA_000741935.1_ASM74193v1	25291764	FTZ
Brucella abortus 225/65	1169203	PRJNA173520	173520	Proteobacteria	Alphaproteobacteria	3.27364	57.2	-	AQIQ01	3	3365	3151	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00839717	GCA_000369905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/905/GCA_000369905.1_Bruc_abor_225_65_V1	-	225/65
Xanthomonas citri subsp. citri	611301	PRJEB7149	306106	Proteobacteria	Gammaproteobacteria	5.26663	64.6	-	CCWC01	56	5013	4936	12/16/15	12/16/15	Scaffold	Genoscope CEA	SAMEA2752229	GCA_001489975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/975/GCA_001489975.1_ASX_L_PRJEB7149_v1	-	-
Campylobacter fetus subsp. fetus cff110800-21-2	1273130	PRJNA183992	183992	Proteobacteria	delta/epsilon subdivisions	1.75142	33.1	-	LSZN01	306	-	-	7/25/17	7/25/17	Contig	Utrecht University	SAMN04505905	GCA_002238195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/195/GCA_002238195.1_ASM223819v1	27599479	cff110800-21-2
Xanthomonas oryzae pv. oryzae	64187	PRJNA269406	269406	Proteobacteria	Gammaproteobacteria	4.25085	63.9	-	JXEC01	422	4209	3418	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252505	GCA_001927625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/625/GCA_001927625.1_ASM192762v1	-	BXO557
Oenococcus oeni IOEB_L26_1	1428428	PRJNA229554	229554	Terrabacteria group	Firmicutes	1.7941	37.8	-	AZLP01	26	1817	1573	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02904298	GCA_000762145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/145/GCA_000762145.1_Oeoe_IOEB_L26_1_1.0	24901216	IOEB_L26_1
Streptococcus mitis	28037	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.98428	40.2	-	NCVJ01	21	1987	1850	4/18/17	4/21/17	Scaffold	Slagelse Hospital	SAMN06705599	GCA_002096815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/815/GCA_002096815.1_ASM209681v1	27325438	RH_12363_08
Vibrio parahaemolyticus	670	PRJNA275536	275536	Proteobacteria	Gammaproteobacteria	5.18761	45.4	-	LASF01	85	5003	4797	4/21/15	3/17/17	Scaffold	Health Canada	SAMN03452289	GCA_000975195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/975/195/GCA_000975195.1_ASM97519v1	-	Apr-51
Capnocytophaga canimorsus	28188	PRJNA369395	369395	FCB group	Bacteroidetes/Chlorobi group	2.4554	36.3	chromosome:NZ_CP022389.1/CP022389.1	-	1	2173	2085	9/14/17	9/16/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06289144	GCA_002302655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/655/GCA_002302655.1_ASM230265v1	-	H3936
Candidatus Liberibacter asiaticus str. Ishi-1	931202	PRJDB1752	257706	Proteobacteria	Alphaproteobacteria	1.19085	36.3	chromosome:NZ_AP014595.1/AP014595.1	-	1	1078	1004	8/2/14	4/17/17	Complete Genome	"NARO, Institute of Fruit Tree Science"	SAMD00000555	GCA_000829355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/355/GCA_000829355.1_ASM82935v1	25180586	Ishi-1
Clostridium botulinum E1 str. 'BoNT E Beluga'	536233	PRJNA29861	29861	Terrabacteria group	Firmicutes	3.9992	27.4	-	ACSC01	6	3709	3508	7/1/09	3/22/17	Contig	Los Alamos National Laboratory	SAMN02470262	GCA_000175335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/335/GCA_000175335.1_ASM17533v1	-	BoNT E Beluga
Treponema pallidum subsp. pallidum SS14	455434	PRJNA20067	20067	Spirochaetes	Spirochaetia	1.13946	52.8	chromosome:CP000805.1	-	1	1088	1028	5/22/08	12/11/13	Chromosome	Baylor College of Medicine	SAMN00000318	GCA_000017825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/825/GCA_000017825.1_ASM1782v1	-	SS14
Brucella suis 06-997-1672	1388742	PRJNA217065	217065	Proteobacteria	Alphaproteobacteria	3.32175	57.2	-	AXMW01	20	3392	3154	10/24/13	4/2/17	Contig	Broad Institute	SAMN02334519	GCA_000480135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/135/GCA_000480135.1_Bruc_suis_06-997-1672_V1	-	06-997-1672
Enterococcus faecalis T3	565638	PRJNA32919	32919	Terrabacteria group	Firmicutes	2.79121	37.6	-	ACAF01	10	2791	2674	5/28/09	3/22/17	Scaffold	Broad Institute	SAMN02595251	GCA_000157175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/175/GCA_000157175.1_ASM15717v1	-	T3
Streptococcus mutans TCI-234	1074167	PRJNA72077	72077	Terrabacteria group	Firmicutes	1.85493	36.8	-	AGLV01	106	1884	1759	10/6/11	3/22/17	Contig	JCVI	SAMN02436608	GCA_000229605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/605/GCA_000229605.2_SMUT6-NEX_50-234	-	TCI-234
Neisseria gonorrhoeae ATL_2011_01_05	1351781	PRJNA209483	209483	Proteobacteria	Betaproteobacteria	2.08848	52.5	-	ATQF01	331	2353	2123	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02338807	GCA_001025945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/945/GCA_001025945.1_ASM102594v1	-	ATL_2011_01_05
Enterococcus faecium V689	1134841	PRJNA82071	82071	Terrabacteria group	Firmicutes	2.86227	37.7	-	AMAC01	214	2928	2781	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299516	GCA_000294815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/815/GCA_000294815.2_ASM29481v2	-	V689
Chlamydia psittaci CP3	1050219	PRJNA68347	68347	PVC group	Chlamydiae	1.17063	38.9606	plasmid unnamed:NZ_CM003516.1/CM003516.1	AFVN01	5	1043	970	10/21/15	4/4/17	Scaffold	CDC	SAMN04201207	GCA_001401455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/455/GCA_001401455.1_ASM140145v1	25887617	CP3
Bacillus amyloliquefaciens	1390	PRJNA276525	276525	Terrabacteria group	Firmicutes	7.59676	46.2	-	JZDI01	1400	8194	7985	3/4/15	3/4/15	Contig	"Institute of Chemistry, Technology and Metallurgy, University of Belgrade, Serbia"	SAMN03377064	GCA_000947115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/115/GCA_000947115.1_ASM94711v1	23994699	12B
Stenotrophomonas maltophilia	40324	PRJNA285410	285410	Proteobacteria	Gammaproteobacteria	4.51475	66.9	-	LDVP01	242	4161	4037	8/31/15	3/26/17	Contig	University of Queensland	SAMN03753634	GCA_001276305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/305/GCA_001276305.1_ASM127630v1	-	A2
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15018	41.2	-	CWDP01	83	2080	1907	6/23/15	3/26/17	Contig	SC	SAMEA1032802	GCA_001175825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/825/GCA_001175825.1_6903_7_28	-	EQUI0173
Pasteurella multocida	747	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	2.3875	40.4	-	NBTG01	2	2244	2102	4/10/17	4/13/17	Contig	US Food and Drug Administration 	SAMN04875557	GCA_002083215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/215/GCA_002083215.1_ASM208321v1	-	FDAARGOS_220
Lactobacillus rhamnosus	47715	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.96063	46.6	-	JUPA01	191	2966	2781	7/10/15	4/3/17	Contig	University of Washington	SAMN03198100	GCA_001067625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/625/GCA_001067625.1_ASM106762v1	26230489	893_LRHA
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.3127	57.2358	chromosome 1:NZ_CP018492.1/CP018492.1; chromosome 2:NZ_CP018493.1/CP018493.1	-	2	3371	3138	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932959	GCA_002191875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/875/GCA_002191875.1_ASM219187v1	28388689	BwIM_IRQ_43
Wolbachia endosymbiont of Cimex lectularius	246273	PRJDB748	252059	Proteobacteria	Alphaproteobacteria	1.25006	36.3	chromosome:NZ_AP013028.1/AP013028.1	-	1	1246	981	6/10/14	4/17/17	Complete Genome	The Open University of Japan	SAMD00061059	GCA_000829315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/315/GCA_000829315.1_ASM82931v1	24982177	wCle
Bordetella bronchiseptica B20-10725633	1458263	PRJNA237088	237088	Proteobacteria	Betaproteobacteria	5.31417	68.1	-	JGWQ01	126	5164	4871	5/12/14	4/4/17	Contig	JCVI	SAMN02614575	GCA_000690395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/395/GCA_000690395.2_gbb66v01	25908122	B20-10725633
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.37054	53.4	-	MKYJ01	24	2299	2120	12/6/16	8/3/17	Contig	Institute for Medical Research	SAMN05877638	GCA_001889855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/855/GCA_001889855.1_ASM188985v1	28254972	rz358
Mycoplasma pneumoniae	2104	PRJNA267612	267612	Terrabacteria group	Tenericutes	0.778884	39.5	-	JTGV01	29	780	670	12/2/15	4/4/17	Scaffold	Capital Institute of Pediatrics	SAMN03142252	GCA_001455635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/635/GCA_001455635.1_ASM145563v1	-	CIP10361
Yersinia enterocolitica	630	PRJNA359201	359201	Proteobacteria	Gammaproteobacteria	4.78201	47.1	-	MTCV01	86	4468	4185	2/1/17	3/29/17	Contig	"Istituto Zooprofilattico Sperimentale del Piemonte, Liguria e Valle d'Aosta"	SAMN06187705	GCA_001983245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/245/GCA_001983245.1_ASM198324v1	-	Y1WildBoar1B
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.07965	41.6	-	JJQJ01	231	3533	3282	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708969	GCA_000979925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/925/GCA_000979925.1_gtlEnvA5udCFS	25756680	1.H.A.1A.6
Chlamydia abortus	83555	PRJEB2710	204487	PVC group	Chlamydiae	1.14782	39.9	-	FRDP01	13	1031	942	12/3/16	4/16/17	Scaffold	SC	SAMEA1094378	GCA_900128555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/555/GCA_900128555.1_7067_6_61	-	09DC76
Serratia marcescens	615	PRJNA240624	240624	Proteobacteria	Gammaproteobacteria	5.02987	59.8	-	JGVB01	161	4774	4605	5/22/14	3/24/17	Contig	Serratia marcescens ATCC14041	SAMN02678212	GCA_000695485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/485/GCA_000695485.1_smgenome	24948764	ATCC 14041
Lactobacillus plantarum subsp. argentoratensis DSM 16365	1423831	PRJNA222257	222257	Terrabacteria group	Firmicutes	3.18631	45	-	AZFR01	210	3072	2851	11/6/15	3/27/17	Scaffold	Shanghai Majorbio	SAMN02369470	GCA_001435215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/435/215/GCA_001435215.1_ASM143521v1	26415554	DSM 16365
Mannheimia haemolytica	75985	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.59482	41	-	LQEB01	90	2664	2519	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366523	GCA_001930365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/365/GCA_001930365.1_ASM193036v1	-	2436MH
Campylobacter coli 1948	887296	PRJNA52729	52729	Proteobacteria	delta/epsilon subdivisions	1.61843	31.5	-	AINE01	104	1670	1573	3/16/12	3/18/17	Contig	Cornell University	SAMN02429060	GCA_000253855.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/855/GCA_000253855.3_ASM25385v3	-	1948
Burkholderia sp. RF7-non_BP1	1637847	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.32566	66.5	-	LOSZ01	100	6808	6453	1/21/16	4/11/17	Contig	Northern Arizona University	SAMN03449133	GCA_001522425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/425/GCA_001522425.1_ASM152242v1	-	RF7-non_BP1
Propionibacterium acnes HL002PA3	765117	PRJNA49269	49269	Terrabacteria group	Actinobacteria	2.47544	60.1	-	ADYR01	13	2493	2362	7/30/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189193	GCA_000144775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/775/GCA_000144775.1_ASM14477v1	-	HL002PA3
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.50143	32.7	-	CUEX01	64	2483	2347	3/31/15	3/26/17	Contig	SC	SAMEA1035035	GCA_001232285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/285/GCA_001232285.1_7067_4_87	-	CN1167
Proteus mirabilis	584	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.85559	38.4	-	JWAP01	113	3483	3380	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197123	GCA_001062135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/135/GCA_001062135.1_ASM106213v1	26230489	1166_PMIR
Enterobacter cloacae	550	PRJNA244549	244549	Proteobacteria	Gammaproteobacteria	5.55547	54.6	-	JPPR01	4	5623	5280	9/17/14	4/10/17	Scaffold	Los Alamos National Laboratory	SAMN02937552	GCA_000755525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/525/GCA_000755525.1_ASM75552v1	-	ATCC 13047
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.27091	54.9	-	FKYZ01	56	6100	5850	5/21/16	2/21/17	Scaffold	SC	SAMEA2273701	GCA_900083655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/655/GCA_900083655.1_11983_8_52	-	2880STDY5682626
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.70994	56.5	-	MRXB01	96	4660	4431	3/31/17	4/6/17	Contig	FDA/CFSAN	SAMN06100265	GCA_002075445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/445/GCA_002075445.1_ASM207544v1	-	MOD1-Md6g
Lactobacillus salivarius	1624	PRJNA357984	357984	Terrabacteria group	Firmicutes	1.79909	32.6	-	NBEH01	45	1759	1652	4/5/17	4/8/17	Scaffold	University College Cork	SAMN06163266	GCA_002079485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/485/GCA_002079485.1_ASM207948v1	-	JCM 1044
Moraxella catarrhalis 12P80B1	857577	PRJNA49915	49915	Proteobacteria	Gammaproteobacteria	1.81443	41.7	-	AERG01	53	1768	1727	3/22/11	11/6/13	Contig	Center for Genomic Sciences	SAMN02393788	GCA_000192965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/965/GCA_000192965.2_ASM19296v2	21269504	12P80B1
Mycobacterium abscessus subsp. bolletii 2B-0307	1001713	PRJNA65157	65157	Terrabacteria group	Actinobacteria	4.80997	64.2	-	AKUU01	9	4812	4700	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00672641	GCA_000270765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/765/GCA_000270765.1_ASM27076v1	-	2B-0307
Bifidobacterium breve MCC 1454	1365967	PRJNA215980	215980	Terrabacteria group	Actinobacteria	2.45745	58.5	-	AWFU01	14	2217	2034	8/11/15	4/3/17	Scaffold	"Food Science and Technology Institute, Morinaga Milk Industry Co., Ltd"	SAMN03978804	GCA_001264135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/135/GCA_001264135.1_ASM126413v1	26236711	MCC 1454
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.23918	36.7	-	LPST01	10	2354	2246	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305181	GCA_001560815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/815/GCA_001560815.1_NG05B_CO5_14	-	NG05B_CO5_14
Vibrio sp. M12-1144	1307414	PRJDB5318	354994	Proteobacteria	Gammaproteobacteria	3.67088	44	-	BDJF01	33	3375	3237	11/25/16	4/16/17	Scaffold	Korea Research Institute of Bioscience and Biotechnology	SAMD00066877	GCA_001895205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/205/GCA_001895205.1_ASM189520v1	-	M12-1144
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.02919	60.1	-	DBHT01	82	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450815	GCA_002296205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/205/GCA_002296205.1_ASM229620v1	28894102	-
Aeromonas hydrophila	644	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.68345	61.6	-	JVDW01	111	4293	4132	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197714	GCA_001057115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/115/GCA_001057115.1_ASM105711v1	26230489	52_AHYD
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.24334	66.9	-	LOYI01	150	7585	7082	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449291	GCA_001526225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/225/GCA_001526225.1_ASM152622v1	-	MSMB2046
Flavobacterium psychrophilum	96345	PRJEB21067	396411	FCB group	Bacteroidetes/Chlorobi group	2.77695	32.3	-	FYCX01	59	2538	2420	7/29/17	8/7/17	Contig	INRA	SAMEA104126820	GCA_900186755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/755/GCA_900186755.1_NO004_V1	-	NO004
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.76118	47.6	-	MEAM01	77	3495	3304	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320414	GCA_001883565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/565/GCA_001883565.1_ASM188356v1	-	04/1749
Lactobacillus crispatus DSM 20584 = JCM 1185	1423736	PRJDB800	243711	Terrabacteria group	Firmicutes	2.03399	36.6	-	BBBS01	151	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000420	GCA_001311685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/685/GCA_001311685.1_ASM131168v1	-	JCM 1185
Lactobacillus paracasei	1597	PRJNA407882	407882	Terrabacteria group	Firmicutes	3.01505	46.3	-	NXES01	73	3242	2945	10/1/17	10/1/17	Contig	McGill University	SAMN07665582	GCA_002406665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/406/665/GCA_002406665.1_ASM240666v1	-	B3
Streptococcus oralis subsp. dentisani 7746	1297534	PRJEB1503	198473	Terrabacteria group	Firmicutes	1.98109	40.9	-	CAUJ01	8	1962	1859	4/22/13	4/1/17	Scaffold	CSISP	SAMEA2272693	GCA_000382805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/805/GCA_000382805.1_ASM38280v1	24006481	CECT 7746
Klebsiella variicola	244366	PRJEB7831	268465	Proteobacteria	Gammaproteobacteria	5.85317	56.9	-	CXPA01	126	5866	5450	7/24/15	2/21/17	Scaffold	INSTITUTO NACIONAL DE SALUD	SAMEA3488478	GCA_001261795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/795/GCA_001261795.1_KvT29A	-	-
Pseudoalteromonas sp. S8-8	1333520	PRJNA202438	202438	Proteobacteria	Gammaproteobacteria	4.91123	39.2	-	AUTR01	79	4475	4232	11/20/13	4/9/17	Scaffold	University of Florence	SAMN02471754	GCA_000497875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/875/GCA_000497875.1_s8-8	-	S8-8
Sulfolobus acidocaldarius SUSAZ	1435377	PRJNA231215	231215	TACK group	Crenarchaeota	2.06192	36.3	chromosome:CP006977.1	-	1	2228	2146	12/16/13	10/1/14	Complete Genome	Center for Genomic Sciences	SAMN03081514	GCA_000508305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/305/GCA_000508305.1_ASM50830v1	-	SUSAZ
Enterobacter asburiae JCM 6051	1298604	PRJDB880	243764	Proteobacteria	Gammaproteobacteria	4.75499	55.4	-	BBED01	248	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016833	GCA_001312605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/605/GCA_001312605.1_ASM131260v1	-	JCM 6051
Pseudomonas amygdali pv. lachrymans	53707	PRJNA285233	285233	Proteobacteria	Gammaproteobacteria	7.31726	57.1	-	LGLK01	75	6781	6781	9/18/15	9/18/15	Scaffold	University of Toronto	SAMN03837735	GCA_001293825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/825/GCA_001293825.1_Pla107	-	107
Acinetobacter pittii	48296	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.10135	38.7	-	LLEB01	62	4047	3817	11/5/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145658	GCA_001433225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/225/GCA_001433225.1_ASM143322v1	-	ABBL047
Citrobacter freundii	546	PRJNA252011	252011	Proteobacteria	Gammaproteobacteria	5.33141	51.5	-	JRTF01	163	5357	5082	10/26/15	4/4/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02872776	GCA_001412755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/755/GCA_001412755.1_ASM141275v1	25501822	RU2 LB36
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.78276	55.1	-	JZZA01	71	4753	4507	3/19/15	3/25/17	Contig	JCVI	SAMN03283670	GCA_000957085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/085/GCA_000957085.1_ASM95708v1	-	35673
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.30718	55	-	LDAZ01	49	5241	5012	5/21/15	4/6/17	Contig	JCVI	SAMN03495935	GCA_001011415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/415/GCA_001011415.1_ASM101141v1	-	GN02126
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.86055	64.2	-	FVTC01	19	4817	4686	3/10/17	3/18/17	Contig	SC	SAMEA2070907	GCA_900138865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/865/GCA_900138865.1_10208_3_54	-	479
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.27628	67	-	LOYK01	88	7648	7258	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449294	GCA_001526255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/255/GCA_001526255.1_ASM152625v1	-	MSMB1820
Pseudomonas sp. LAIL14HWK12:I9	1259804	PRJNA179473	179473	Proteobacteria	Gammaproteobacteria	5.68149	62.1	-	AZVR01	25	5264	5103	1/3/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02597222	GCA_000514315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/315/GCA_000514315.1_ASM51431v1	-	LAIL14HWK12:I9
Streptomyces sp. CNS335	1169160	PRJNA175193	175193	Terrabacteria group	Actinobacteria	8.59197	73.6	-	ARHS01	93	7338	7090	4/22/13	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440454	GCA_000377125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/125/GCA_000377125.1_ASM37712v1	-	CNS335
Acinetobacter sp. Root1280	1736444	PRJNA297942	297942	Proteobacteria	Gammaproteobacteria	4.69923	37.9	-	LMED01	30	4480	4249	11/2/15	4/6/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155713	GCA_001425285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/285/GCA_001425285.1_Root1280	26633631	Root1280
Flavobacterium sp. UBA4197	1946546	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.91085	39.6	-	DFUB01	34	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455642	GCA_002379575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/575/GCA_002379575.1_ASM237957v1	28894102	-
Klebsiella sp. NFIX18	1566171	PRJEB17902	353820	Proteobacteria	Gammaproteobacteria	5.21587	58.2	-	FPJY01	19	5091	4871	11/17/16	2/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159373	GCA_900119545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/545/GCA_900119545.1_IMG-taxon_2602042052_annotated_assembly	-	NFIX18
Bacillus sp. TH008	1609979	PRJNA273390	273390	Terrabacteria group	Firmicutes	4.45871	46.2	-	JZBT01	112	4592	4320	4/7/15	4/10/17	Scaffold	The Ohio State University	SAMN03291350	GCA_000970445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/445/GCA_000970445.1_ASM97044v1	26798097	TH008
Clostridium sp. FS41	1609975	PRJNA274493	274493	Terrabacteria group	Firmicutes	6.26587	49.4	-	JYHN01	97	5792	5576	3/16/15	4/10/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03329171	GCA_000954015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/954/015/GCA_000954015.1_ASM95401v1	25931608	FS41
Sphingomonas sp. Leaf9	1735674	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	3.76591	66.9	-	LMKC01	7	3492	3391	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151578	GCA_001421355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/355/GCA_001421355.1_Leaf9	26633631	Leaf9
Synechococcus sp. TMED20	1986597	PRJNA385857	385857	Terrabacteria group	Cyanobacteria/Melainabacteria group	3.60727	53.7	-	NHBZ01	162	3786	3628	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971874	GCA_002167425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/425/GCA_002167425.1_ASM216742v1	-	-
Rhodococcus sp. YL-0	1930581	PRJNA358671	358671	Terrabacteria group	Actinobacteria	7.23301	62.4	-	MSQF01	174	6800	6548	6/2/17	6/5/17	Contig	NJAU	SAMN06177111	GCA_002165495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/495/GCA_002165495.1_ASM216549v1	-	YL-0
Enterobacter sp. BIDMC94	1686397	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.18632	54.8	-	LETM01	22	5151	4890	6/19/15	4/10/17	Scaffold	Broad Institute	SAMN03280189	GCA_001037815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/815/GCA_001037815.1_Ente_cloa_complex_BIDMC94_V1	-	BIDMC94
Staphylococcus sp. HMSC067B04	1739347	PRJNA299997	299997	Terrabacteria group	Firmicutes	2.5255	31.9	-	LTYR01	91	2456	2347	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477655	GCA_001812215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/215/GCA_001812215.1_ASM181221v1	-	HMSC067B04
Corynebacterium sp. HMSC063A05	1715130	PRJNA296258	296258	Terrabacteria group	Actinobacteria	2.44494	58.6	-	LTJF01	24	2146	2062	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477526	GCA_001809695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/695/GCA_001809695.1_ASM180969v1	-	HMSC063A05
Arthrobacter sp. W1	490910	PRJNA270005	270005	Terrabacteria group	Actinobacteria	3.7854	61.9	-	JWMD01	38	3539	3389	12/31/14	4/17/17	Contig	Dalian University of Technology	SAMN03262488	GCA_000812545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/545/GCA_000812545.1_ASM81254v1	25908151	W1
Bradyrhizobium sp. NFR13	1566285	PRJEB17463	351689	Proteobacteria	Alphaproteobacteria	6.2261	61.5	-	FOTP01	17	5921	5776	10/31/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN03159423	GCA_900114605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/605/GCA_900114605.1_IMG-taxon_2602042107_annotated_assembly	-	NFR13
Streptococcus sp. HMSC071D03	1739341	PRJNA299991	299991	Terrabacteria group	Firmicutes	2.12068	39.2	-	LTEU01	142	2098	1915	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477649	GCA_001812125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/125/GCA_001812125.1_ASM181212v1	-	HMSC071D03
Mycobacterium sp. H092	1720573	PRJNA294421	294421	Terrabacteria group	Actinobacteria	5.71509	63.9	-	LJYP01	96	5742	5466	11/6/15	4/11/17	Contig	US EPA	SAMN04091151	GCA_001440225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/225/GCA_001440225.1_ASM144022v1	-	H092
Enterococcus sp. 10A9_DIV0425	1987383	PRJNA313452	313452	Terrabacteria group	Firmicutes	3.36998	37.3	-	NGMO01	14	2764	2534	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634043	GCA_002140175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/175/GCA_002140175.1_ASM214017v1	-	10A9_DIV0425
Treponema sp. UBA4307	1947723	PRJNA348753	348753	Spirochaetes	Spirochaetia	2.99716	37.8	-	DGUP01	80	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453873	GCA_002394685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/685/GCA_002394685.1_ASM239468v1	28894102	-
Methylobacterium sp. B34	95563	PRJDA69971	69971	Proteobacteria	Alphaproteobacteria	6.92666	70.4	-	BADE01	1622	6999	5433	12/26/12	5/19/17	Scaffold	Kazusa DNA Research Institute	SAMD00036575	GCA_000333475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/475/GCA_000333475.1_ASM33347v1	-	B34
uncultured Eubacterium sp.	165185	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.51579	37.9	-	FMFP01	51	3169	3099	8/16/16	8/16/16	Scaffold	SC	SAMEA3545347	GCA_900066585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/585/GCA_900066585.1_14207_7_6	-	-
Paenibacillus sp. IHB B 3415	867080	PRJNA268701	268701	Terrabacteria group	Firmicutes	8.43679	50.8	-	JUEI01	289	7369	7047	12/16/14	4/16/17	Contig	"CSIR-Institute of Himalayan Bioresource Technology, Palampur and Central Arid Zone Research Institute, Jodhpur"	SAMN03223810	GCA_000802655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/655/GCA_000802655.2_ASM80265v2	25700411	IHB B 3415
Thioalkalivibrio sp. AKL10	1158158	PRJNA185232	185232	Proteobacteria	Gammaproteobacteria	2.98668	66.1	-	ARMQ01	8	2858	2721	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441314	GCA_000381845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/845/GCA_000381845.1_ASM38184v1	-	AKL10
Bacteroides sp. CAG:754	1262750	PRJEB996	206786	FCB group	Bacteroidetes/Chlorobi group	5.41744	43.3	-	CBCP01	178	4083	4054	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138631	GCA_000434875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/875/GCA_000434875.1_MGS754	-	-
Prochlorococcus sp. scB243_495L20	1471473	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.56936	31.3	-	JFLX01	143	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671344	GCA_000634215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/215/GCA_000634215.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. BCW_4325	1903589	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.73338	30.3	-	MJYD01	88	1808	1631	10/4/16	4/13/17	Scaffold	University of California at Davis	SAMN03358051	GCA_001763125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/125/GCA_001763125.1_ASM176312v1	-	BCW_4325
Neisseria sp. HMSC078H04	1715040	PRJNA296167	296167	Proteobacteria	Betaproteobacteria	2.23858	49	-	LTNY01	39	2184	2063	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498575	GCA_001838135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/135/GCA_001838135.1_ASM183813v1	-	HMSC078H04
Rhizobium sp. Leaf68	1736231	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.78495	58.3	-	LMLQ01	15	4462	4344	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151611	GCA_001421985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/985/GCA_001421985.1_Leaf68	26633631	Leaf68
Chryseobacterium sp. 39-10	1895745	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	3.07378	39.4	-	MKTK01	41	2808	2667	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660553	GCA_001898255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/255/GCA_001898255.1_ASM189825v1	-	-
Mesorhizobium sp. L2C085B000	1287117	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.60346	62.5	-	AYWW01	46	6530	6081	12/3/13	4/9/17	Contig	University of Southern California	SAMN02359658	GCA_000502895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/895/GCA_000502895.1_Mloti_L2C085B000	-	L2C085B000
Microbacterium sp. Root61	1736570	PRJNA297942	297942	Terrabacteria group	Actinobacteria	4.0226	68.7	-	LMGU01	2	3741	3664	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04155839	GCA_001427525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/525/GCA_001427525.1_Root61	26633631	Root61
Bacillus velezensis	492670	PRJNA299292	299292	Terrabacteria group	Firmicutes	4.03433	46.3	-	LLZC01	24	4004	3835	12/7/15	3/22/17	Contig	NCAUR-ARS-USDA	SAMN04196551	GCA_001461825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/461/825/GCA_001461825.1_ASM146182v1	-	NRRL B-41580
Gilliamella apicola	1196095	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.92823	34	-	MZNI01	130	2659	2538	5/16/17	5/24/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603514	GCA_002141595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/595/GCA_002141595.1_ASM214159v1	-	Aw-17
Klebsiella michiganensis	1134687	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.01168	55.7	-	JVJO01	603	6023	5541	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197566	GCA_001070955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/955/GCA_001070955.1_ASM107095v1	26230489	375_KOXY
Achromobacter sp. KAs 3-5	1915388	PRJNA352521	352521	Proteobacteria	Betaproteobacteria	5.71797	64.9	-	MQNQ02	252	5829	4930	1/30/17	7/18/17	Scaffold	Indian Institute of Technology Kharagpur	SAMN05981820	GCA_001975485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/485/GCA_001975485.2_ASM197548v2	-	KAs 3-5
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.69002	51	-	MPRU01	70	2624	2533	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016292	GCA_002021235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/235/GCA_002021235.1_ASM202123v1	-	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.56077	57.5	-	FXML01	73	5605	5266	4/28/17	5/6/17	Scaffold	SC	SAMEA2609386	GCA_900180585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/585/GCA_900180585.1_14936_2_79	-	3189STDY5864933
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.80076	32.3	-	FQNB01	12	2799	2632	11/24/16	4/5/17	Contig	SC	SAMEA3449145	GCA_900127115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/115/GCA_900127115.1_17175_3_89	-	3688STDY6125143
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.57631	67.7	-	LPMG01	104	6919	6576	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449666	GCA_001533925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/925/GCA_001533925.1_ASM153392v1	-	MSMB810WGS
Xanthomonas axonopodis pv. manihotis str. UG39	1185711	PRJNA163817	163817	Proteobacteria	Gammaproteobacteria	4.9115	65	-	AKEZ01	130	4376	4059	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090356	GCA_000266545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/545/GCA_000266545.1_UG39	22699502	UG39
Xanthomonas axonopodis pv. manihotis str. UG43	1185712	PRJNA163819	163819	Proteobacteria	Gammaproteobacteria	4.92418	65	-	AKFA01	145	4406	4070	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090357	GCA_000266565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/565/GCA_000266565.1_UG43	22699502	UG43
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.57087	67.6	-	LPMK01	83	6928	6551	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449670	GCA_001533985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/985/GCA_001533985.1_ASM153398v1	-	MSMB826WGS
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.78878	32.3	-	FQRA01	20	2788	2612	11/25/16	4/6/17	Contig	SC	SAMEA3449070	GCA_900128145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/145/GCA_900128145.1_17175_3_14	-	3688STDY6125062
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.79941	57	-	FXMJ01	111	5897	5489	4/28/17	5/6/17	Scaffold	SC	SAMEA2609398	GCA_900180635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/635/GCA_900180635.1_14936_2_82	-	3189STDY5864936
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.53247	50.9	-	MPRW01	65	2492	2411	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016294	GCA_002021255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/255/GCA_002021255.1_ASM202125v1	-	-
Achromobacter sp. NFACC18-2	1564112	PRJEB16798	350906	Proteobacteria	Betaproteobacteria	6.2908	66.5	-	FNYM01	37	5794	5647	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159494	GCA_900108985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/985/GCA_900108985.1_IMG-taxon_2599185292_annotated_assembly	-	NFACC18-2
Klebsiella michiganensis	1134687	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.1532	55.7	-	JVIT01	241	6071	5715	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197587	GCA_001072735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/735/GCA_001072735.1_ASM107273v1	26230489	397_KOXY
Gilliamella apicola	1196095	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.91073	33.9	-	NARN01	127	2630	2527	5/16/17	5/23/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603515	GCA_002141635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/635/GCA_002141635.1_ASM214163v1	-	N4
Bacillus velezensis	492670	PRJNA299292	299292	Terrabacteria group	Firmicutes	3.92842	46.4	-	LLZA01	25	3892	3722	12/7/15	3/22/17	Contig	NCAUR-ARS-USDA	SAMN04196679	GCA_001461835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/461/835/GCA_001461835.1_ASM146183v1	-	KACC 18228
Microbacterium sp. CCH5-D1	1768780	PRJNA299404	299404	Terrabacteria group	Actinobacteria	3.98657	68.3	-	LSJW01	326	3932	3678	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299473	GCA_001557335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/335/GCA_001557335.1_ASM155733v1	-	CCH5-D1
Mesorhizobium sp. LNHC209A00	1287226	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.65461	62.5	-	AYWT01	71	6545	5981	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359661	GCA_000502915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/915/GCA_000502915.1_Mloti_LNHC209A00	-	LNHC209A00
Chryseobacterium sp. 36-9	1895905	PRJNA279279	279279	FCB group	Bacteroidetes/Chlorobi group	3.47828	35.6	-	MKVE01	50	3244	3077	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660599	GCA_001898785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/785/GCA_001898785.1_ASM189878v1	-	-
Rhizobium sp. Leaf262	1736312	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	5.04693	57.3	-	LMMM01	21	4807	4656	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151702	GCA_001422245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/245/GCA_001422245.1_Leaf262	26633631	Leaf262
Neisseria sp. HMSC064F04	1739440	PRJNA300090	300090	Proteobacteria	Betaproteobacteria	2.48578	51	-	LTNO01	141	2433	2230	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498684	GCA_001838365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/365/GCA_001838365.1_ASM183836v1	-	HMSC064F04
Campylobacter sp. BCW_4326	1903590	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.73214	30.3	-	MJYE01	90	1816	1627	10/4/16	4/13/17	Scaffold	University of California at Davis	SAMN03358052	GCA_001763155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/155/GCA_001763155.1_ASM176315v1	-	BCW_4326
Prochlorococcus sp. scB243_495N16	1471474	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.4344	31.3	-	JFLY01	264	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671345	GCA_000634235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/235/GCA_000634235.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Bacteroides sp. CAG:709	1262748	PRJEB984	206737	FCB group	Bacteroidetes/Chlorobi group	2.72682	49.4	-	CBCT01	55	2216	2178	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138633	GCA_000434935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/935/GCA_000434935.1_MGS709	-	-
Thioalkalivibrio sp. ALSr1	748658	PRJNA185293	185293	Proteobacteria	Gammaproteobacteria	2.92881	67.5	-	ARMV01	25	2790	2664	4/23/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441317	GCA_000381945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/381/945/GCA_000381945.1_ASM38194v1	-	ALSr1
Paenibacillus sp. VKM B-2647	1590651	PRJNA271371	271371	Terrabacteria group	Firmicutes	6.95655	55	-	JXAK01	152	6645	5849	1/27/15	4/10/17	Contig	Kingston University	SAMN03274189	GCA_000829455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/455/GCA_000829455.1_ASM82945v1	-	VKM B-2647
uncultured Eubacterium sp.	165185	PRJEB10915	297013	Terrabacteria group	Firmicutes	4.2957	45.1	-	FMHH01	20	4127	4079	8/16/16	8/16/16	Scaffold	SC	SAMEA3545368	GCA_900066695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/695/GCA_900066695.1_14207_7_28	-	-
Methylobacterium sp. UNC300MFChir4.1	1502747	PRJEB16913	351052	Proteobacteria	Alphaproteobacteria	6.4344	71.1	-	FOCS01	80	6099	6026	10/29/16	10/29/16	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02799625	GCA_900110155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/155/GCA_900110155.1_IMG-taxon_2590828860_annotated_assembly	-	UNC300MFChir4.1
Treponema sp. UBA4267	1947722	PRJNA348753	348753	Spirochaetes	Spirochaetia	2.67225	36.2	-	DGWD01	45	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456222	GCA_002395155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/155/GCA_002395155.1_ASM239515v1	28894102	-
Enterococcus sp. 10F3_DIV0382	1834165	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.90463	38.3	-	NGMF01	11	2917	2687	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634048	GCA_002140245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/245/GCA_002140245.1_ASM214024v1	-	10F3_DIV0382
Prevotella sp. BP1-148	645274	PRJEB15901	347967	FCB group	Bacteroidetes/Chlorobi group	3.4796	48.4	-	FNCQ01	41	2777	2676	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487901	GCA_900100635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/635/GCA_900100635.1_IMG-taxon_2623620508_annotated_assembly	-	BP1-148
Mycobacterium sp. H101	1720574	PRJNA294421	294421	Terrabacteria group	Actinobacteria	5.72322	63.9	-	LJYQ01	87	5746	5478	11/6/15	4/11/17	Contig	US EPA	SAMN04091152	GCA_001440245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/245/GCA_001440245.1_ASM144024v1	-	H101
Streptococcus sp. HMSC077F03	1739357	PRJNA300007	300007	Terrabacteria group	Firmicutes	1.92667	41.2	-	LTEI01	66	1900	1798	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477662	GCA_001812375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/375/GCA_001812375.1_ASM181237v1	-	HMSC077F03
Bradyrhizobium sp. ORS 375	566679	PRJNA72429	72429	Proteobacteria	Alphaproteobacteria	7.85947	65.5	-	CAFI01	497	7230	6821	12/14/11	5/18/17	Scaffold	CEA IG Genoscope	SAMEA3138406	GCA_000239775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/775/GCA_000239775.2_ASM23977v2	24704842	ORS375
Arthrobacter sp. SPG23	1610703	PRJNA274694	274694	Terrabacteria group	Actinobacteria	4.70383	65.7	-	JYCN01	38	4276	4088	2/17/15	4/10/17	Contig	Thompson Rivers University	SAMN03330027	GCA_000876655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/655/GCA_000876655.1_ASM87665v1	26701084	SPG23
Corynebacterium sp. HMSC058E07	1715157	PRJNA296285	296285	Terrabacteria group	Actinobacteria	2.22374	62	-	LTIW01	67	1993	1863	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477532	GCA_001809885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/885/GCA_001809885.1_ASM180988v1	-	HMSC058E07
Staphylococcus sp. HMSC056G08	1739350	PRJNA300000	300000	Terrabacteria group	Firmicutes	2.84631	35.6	-	LTEM01	134	2756	2614	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477671	GCA_001812305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/305/GCA_001812305.1_ASM181230v1	-	HMSC056G08
Enterobacter sp. BIDMC99	1686398	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.86092	55.4	-	LETN01	4	4780	4546	6/19/15	4/10/17	Scaffold	Broad Institute	SAMN03280190	GCA_001037835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/835/GCA_001037835.1_Ente_cloa_complex_BIDMC99_V1	-	BIDMC99
Rhodococcus sp. NCIMB 12038	933800	PRJNA386481	386481	Terrabacteria group	Actinobacteria	9.26648	67.2	-	NHML01	109	8498	8035	6/2/17	6/5/17	Contig	Queens University Belfast	SAMN06957463	GCA_002165735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/735/GCA_002165735.1_ASM216573v1	-	NCIMB 12038
Synechococcus sp. TMED19	1986596	PRJNA385857	385857	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.07488	60.1	-	NHBY01	56	2297	2220	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971873	GCA_002168155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/155/GCA_002168155.1_ASM216815v1	-	-
Sphingomonas sp. Leaf16	1735681	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	3.94593	66.9	-	LMKJ01	16	3618	3521	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151583	GCA_001421405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/405/GCA_001421405.1_Leaf16	26633631	Leaf16
Clostridium sp. IBUN62F	1523157	PRJNA255517	255517	Terrabacteria group	Firmicutes	3.83681	28.8	-	JZWH01	85	3473	3318	4/2/15	4/10/17	Contig	Universidad Nacional de Colombia	SAMN02924052	GCA_000968235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/235/GCA_000968235.1_CLOSIBUN62Fv1.0	25999575	IBUN62F
Bacillus sp. FJAT-27445	1679166	PRJNA289029	289029	Terrabacteria group	Firmicutes	4.18877	43.9	-	LFZT01	25	4311	3922	7/21/15	4/10/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN03840764	GCA_001183905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/905/GCA_001183905.1_ASM118390v1	-	FJAT-27445
Klebsiella sp. NFPP35	1566184	PRJEB17899	353804	Proteobacteria	Gammaproteobacteria	5.44138	57.9	-	FPKA01	25	5315	5093	11/17/16	2/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159289	GCA_900119585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/585/GCA_900119585.1_IMG-taxon_2599185169_annotated_assembly	-	NFPP35
Flavobacterium sp. UBA4098	1946544	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.02313	34.9	-	DFXW01	43	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06456322	GCA_002382495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/495/GCA_002382495.1_ASM238249v1	28894102	-
Acinetobacter sp. LW15	2006115	PRJNA388764	388764	Proteobacteria	Gammaproteobacteria	3.57615	37.2	-	NIFO01	60	3331	3187	7/26/17	7/28/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN07184470	GCA_002233755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/755/GCA_002233755.1_ASM223375v1	-	LW15
Streptomyces sp. CNT372	1169154	PRJNA175194	175194	Terrabacteria group	Actinobacteria	6.45645	73.3	-	ARHT01	40	5684	5393	4/22/13	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441678	GCA_000377145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/145/GCA_000377145.1_ASM37714v1	-	CNT372
Pseudomonas sp. LAIL14HWK12:I12	1259803	PRJNA179472	179472	Proteobacteria	Gammaproteobacteria	5.5759	62.2	-	AZVS01	26	5152	4986	1/3/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02597223	GCA_000514335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/335/GCA_000514335.1_ASM51433v1	-	LAIL14HWK12:I12
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.30121	66.9	-	LOYO01	64	7730	7385	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449298	GCA_001526345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/345/GCA_001526345.1_ASM152634v1	-	MSMB1830
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.55306	63.8	-	FVTX01	66	5662	5469	3/10/17	3/18/17	Contig	SC	SAMEA2070156	GCA_900139385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/385/GCA_900139385.1_10625_4_17	-	17
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.05079	55.2	-	LDBJ01	51	4977	4770	5/21/15	4/6/17	Contig	JCVI	SAMN03495946	GCA_001011425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/425/GCA_001011425.1_ASM101142v1	-	GN02464
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.26266	54.8	-	JZYZ01	84	5206	4966	3/19/15	3/25/17	Contig	JCVI	SAMN03283647	GCA_000957095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/095/GCA_000957095.1_ASM95709v1	-	35681
Citrobacter freundii	546	PRJNA252011	252011	Proteobacteria	Gammaproteobacteria	5.16986	51.6	-	JRTN01	172	5121	4883	10/26/15	4/4/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02872796	GCA_001412825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/825/GCA_001412825.1_ASM141282v1	25501822	RU2 BHI20
Acinetobacter pittii	48296	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.92003	38.7	-	LLEA01	124	3852	3637	11/5/15	4/4/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145657	GCA_001433295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/295/GCA_001433295.1_ASM143329v1	-	ABBL046
Enterobacter asburiae	61645	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.10552	55.2	-	LJER02	156	4963	4754	10/15/15	11/25/16	Contig	University of KwaZulu Natal	SAMN04011452	GCA_001317125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/125/GCA_001317125.2_ASM131712v2	-	ST252:950126202
Alkaliphilus oremlandii OhILAs	350688	PRJNA16083	16083	Terrabacteria group	Firmicutes	3.12356	36.3	chromosome:NC_009922.1/CP000853.1	-	1	3045	2898	10/11/07	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN00623039	GCA_000018325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/325/GCA_000018325.1_ASM1832v1	-	OhILAs
Pseudoalteromonas sp. TB13	1938599	PRJNA202427	202427	Proteobacteria	Gammaproteobacteria	4.73409	39.1	-	AUTJ01	254	4289	3693	11/20/13	4/9/17	Scaffold	University of Florence	SAMN02260219	GCA_000497915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/915/GCA_000497915.1_TB13	28095778	TB13
Klebsiella variicola	244366	PRJEB7831	268465	Proteobacteria	Gammaproteobacteria	5.90541	56.9	-	CXPC01	206	6003	5481	7/24/15	2/21/17	Scaffold	INSTITUTO NACIONAL DE SALUD	SAMEA3488477	GCA_001261835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/835/GCA_001261835.1_Kv6A2	-	-
Streptococcus oralis subsp. dentisani 7747	1297857	PRJEB1510	198655	Terrabacteria group	Firmicutes	1.88439	41.2	-	CAUK01	6	1846	1726	4/22/13	8/27/17	Scaffold	CSISP	SAMEA2272194	GCA_000382825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/825/GCA_000382825.1_ASM38282v1	24006481	7747
Lactobacillus paracasei	1597	PRJNA407882	407882	Terrabacteria group	Firmicutes	3.01383	46.3	-	NXET01	78	3240	2960	10/1/17	10/1/17	Contig	McGill University	SAMN07665581	GCA_002406765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/406/765/GCA_002406765.1_ASM240676v1	-	B2
Lactobacillus crispatus	47770	PRJNA316969	316969	Terrabacteria group	Firmicutes	2.00625	37.3	-	MAMR01	752	-	-	8/5/16	8/5/16	Scaffold	Loyola University Chicago	SAMN05244207	GCA_001700485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/485/GCA_001700485.1_ASM170048v1	-	OAB24-B
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.75723	47.6	-	MEAN01	85	3485	3301	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320415	GCA_001883575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/575/GCA_001883575.1_ASM188357v1	-	04/1779
Flavobacterium psychrophilum	96345	PRJEB21067	396411	FCB group	Bacteroidetes/Chlorobi group	2.68591	32.4	-	FYCY01	67	2417	2333	7/29/17	8/7/17	Contig	INRA	SAMEA104126821	GCA_900186785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/785/GCA_900186785.1_NO014_V1	-	NO014
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.85692	67	-	LOYM01	142	7125	6713	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449296	GCA_001526305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/305/GCA_001526305.1_ASM152630v1	-	MSMB1823
Aeromonas hydrophila	644	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.68375	61.6	-	JVCD01	99	4300	4125	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197759	GCA_001057275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/275/GCA_001057275.1_ASM105727v1	26230489	56_AHYD
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.4651	59.9	-	DBIJ01	251	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451072	GCA_002296325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/325/GCA_002296325.1_ASM229632v1	28894102	-
Vibrio sp. 10N.222.47.A9	1903178	PRJNA328102	328102	Proteobacteria	Gammaproteobacteria	5.66037	44.1	-	MKKN01	114	5076	4845	1/28/17	4/17/17	Scaffold	Massachusetts Institute of Technology	SAMN05768150	GCA_001974565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/974/565/GCA_001974565.1_ASM197456v1	-	10N.222.47.A9
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.19753	36.7	-	LPSU01	4	2329	2201	2/11/16	4/4/17	Contig	University of Illinois at Urbana-Champaign	SAMN04305182	GCA_001560835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/835/GCA_001560835.1_NG05B_CO5_15	-	NG05B_CO5_15
Bifidobacterium breve 31L	1385944	PRJNA214962	214962	Terrabacteria group	Actinobacteria	2.26565	58.6	-	AWUF01	4	1814	1734	2/13/14	8/5/14	Contig	University of Parma	SAMN02951889	GCA_000568875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/875/GCA_000568875.1_Mira_de-novo_assembly	24581150	31L
Mycobacterium abscessus subsp. bolletii 2B-0912-S	1001712	PRJNA65155	65155	Terrabacteria group	Actinobacteria	4.80931	64.2	-	AKUW01	12	4813	4699	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00715106	GCA_000270785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/785/GCA_000270785.1_ASM27078v1	-	2B-0912-S
Moraxella catarrhalis	480	PRJNA297370	297370	Proteobacteria	Gammaproteobacteria	1.94747	41.5	-	LXHR01	52	2058	2019	6/3/16	6/3/16	Contig	Drexel University College of Medicine	SAMN04122792	GCA_001656425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/425/GCA_001656425.1_ASM165642v1	26912404	F21
Lactobacillus salivarius	1624	PRJNA357984	357984	Terrabacteria group	Firmicutes	1.80136	32.6	-	NBEI01	47	1770	1653	4/5/17	4/8/17	Scaffold	University College Cork	SAMN06163265	GCA_002079505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/505/GCA_002079505.1_ASM207950v1	-	JCM 1042
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.59184	56.6	-	MRXG01	115	4521	4288	3/31/17	4/6/17	Contig	FDA/CFSAN	SAMN06100264	GCA_002075495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/495/GCA_002075495.1_ASM207549v1	-	MOD1-Md70g
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.31902	57.4	-	FKYN01	32	5291	5058	5/19/16	2/21/17	Scaffold	SC	SAMEA2273553	GCA_900083665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/665/GCA_900083665.1_12045_6_21	-	2880STDY5682468
Enterobacter cloacae	550	PRJNA273951	273951	Proteobacteria	Gammaproteobacteria	5.13421	54.9	-	JYGA02	7	5149	4893	3/3/15	3/26/17	Scaffold	Walter Reed Army Institute of Research	SAMN03316841	GCA_000938355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/355/GCA_000938355.2_ASM93835v2	-	MRSN 17626
Proteus mirabilis	584	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.85306	38.4	-	JVUE01	105	3496	3379	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197290	GCA_001062655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/655/GCA_001062655.1_ASM106265v1	26230489	1313_PMIR
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.50913	32.7	-	CUDU01	77	2498	2364	3/31/15	3/26/17	Contig	SC	SAMEA1035055	GCA_001232605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/605/GCA_001232605.1_7067_4_61	-	51-39
Propionibacterium acnes HL025PA1	765089	PRJNA49211	49211	Terrabacteria group	Actinobacteria	2.53513	60.1	-	ADYQ01	12	2544	2396	7/30/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189202	GCA_000144795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/795/GCA_000144795.1_ASM14479v1	-	HL025PA1
Burkholderia sp. NRF60-BP8	1637853	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.03649	67.3	-	LOTR01	58	6618	6287	1/21/16	4/11/17	Contig	Northern Arizona University	SAMN03449153	GCA_001522585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/585/GCA_001522585.1_ASM152258v1	-	NRF60-BP8
Campylobacter coli 1957	887297	PRJNA52731	52731	Proteobacteria	delta/epsilon subdivisions	1.73539	31.3	-	AINF01	123	1822	1732	3/16/12	3/15/17	Contig	Cornell University	SAMN02429001	GCA_000253875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/875/GCA_000253875.2_ASM25387v2	-	1957
Mannheimia haemolytica	75985	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.59188	40.9	-	LQEK01	92	2670	2515	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366532	GCA_001930475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/475/GCA_001930475.1_ASM193047v1	-	2578MH
Lactobacillus plantarum	1590	PRJNA222257	222257	Terrabacteria group	Firmicutes	3.4398	44.2	-	JQAW01	90	3351	3166	11/6/15	3/27/17	Scaffold	Shanghai Majorbio	SAMN02797770	GCA_001436855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/855/GCA_001436855.1_ASM143685v1	26415554	DSM 13273
Serratia marcescens subsp. marcescens ATCC 13880	911022	PRJNA59561	59561	Proteobacteria	Gammaproteobacteria	5.09245	59.8	-	JMPQ01	62	4852	4697	7/28/14	3/24/17	Contig	UW-GEL (University of Wisconsin - Genome Evolution Laboratory)	SAMN02743269	GCA_000735445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/445/GCA_000735445.1_GSMA_DRAFTv1	-	ATCC 13880
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	3.99833	41.7	-	JJQK01	294	3469	3251	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708978	GCA_000979935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/935/GCA_000979935.1_gtlEnvA5udCFS	25756680	1.H.A.2.1
Yersinia enterocolitica	630	PRJNA359202	359202	Proteobacteria	Gammaproteobacteria	4.79044	47.1	-	MTCW01	84	4487	4276	2/1/17	3/29/17	Contig	"Istituto Zooprofilattico Sperimentale del Piemonte, Liguria e Valle d'Aosta"	SAMN06187706	GCA_001983255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/255/GCA_001983255.1_ASM198325v1	-	Y2wildboar1B
Mycoplasma pneumoniae	2104	PRJNA267612	267612	Terrabacteria group	Tenericutes	0.803269	39.9	-	JTGZ01	16	794	694	12/2/15	4/4/17	Scaffold	Capital Institute of Pediatrics	SAMN03142256	GCA_001455675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/675/GCA_001455675.1_ASM145567v1	-	CIP12206
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.5008	53.6	-	MKYN01	40	2470	2242	12/6/16	8/3/17	Contig	Institute for Medical Research	SAMN05877643	GCA_001889905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/905/GCA_001889905.1_ASM188990v1	28254972	c21
Bordetella bronchiseptica F-1	1331260	PRJNA202163	202163	Proteobacteria	Betaproteobacteria	5.37734	68.1	-	JGXA01	96	5177	5014	5/12/14	4/2/17	Contig	JCVI	SAMN02231546	GCA_000690415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/415/GCA_000690415.1_gbh05v01	25908122	F-1
Cardinium endosymbiont cEper1 of Encarsia pergandiella	1231626	PRJEA66421	66421	FCB group	Bacteroidetes/Chlorobi group	0.94493	36.288	chromosome I:NC_018605.1/HE983995.1; plasmid pCher:NC_018606.1/HE983996.1	-	2	839	751	9/13/12	4/17/17	Complete Genome	University of Vienna	SAMEA2272294	GCA_000304455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/455/GCA_000304455.1_CCh_cEper1	23133394	cEper1
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.3115	57.2358	chromosome 1:NZ_CP018500.1/CP018500.1; chromosome 2:NZ_CP018501.1/CP018501.1	-	2	3376	3147	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932984	GCA_002191895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/895/GCA_002191895.1_ASM219189v1	28388689	BwIM_KWT_42
Lactobacillus rhamnosus	47715	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.96637	46.6	-	JUON01	192	2962	2777	7/10/15	4/3/17	Contig	University of Washington	SAMN03198113	GCA_001067885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/885/GCA_001067885.1_ASM106788v1	26230489	906_LRHA
Pasteurella multocida	747	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	2.51383	40.4	-	NBTH01	13	2368	2106	4/10/17	8/11/17	Contig	US Food and Drug Administration 	SAMN04875556	GCA_002083245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/245/GCA_002083245.1_ASM208324v1	-	FDAARGOS_219
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12874	41.2	-	CVXM01	72	2067	1884	6/23/15	3/26/17	Contig	SC	SAMEA1032803	GCA_001175845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/845/GCA_001175845.1_6817_1_57	-	EQUI0010
Stenotrophomonas maltophilia	40324	PRJNA285410	285410	Proteobacteria	Gammaproteobacteria	4.37413	66.7	-	LDVQ01	214	4028	3885	8/31/15	3/26/17	Contig	University of Queensland	SAMN03753635	GCA_001276345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/345/GCA_001276345.1_ASM127634v1	-	B1
Bacillus amyloliquefaciens	1390	PRJNA291066	291066	Terrabacteria group	Firmicutes	3.90337	46.6	-	LGYP01	16	3798	3443	8/5/15	11/24/15	Contig	UFBA	SAMN03939243	GCA_001247635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/635/GCA_001247635.1_ASM124763v1	26586881	629
Chlamydia psittaci DD34	1040963	PRJNA68343	68343	PVC group	Chlamydiae	1.1713	38.9607	plasmid unnamed:NZ_CM003515.1/CM003515.1	AFVL01	5	1043	990	10/21/15	4/4/17	Scaffold	CDC	SAMN04201205	GCA_001401465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/465/GCA_001401465.1_ASM140146v1	25887617	DD34
Enterococcus faecium S447	1134840	PRJNA82069	82069	Terrabacteria group	Firmicutes	2.98195	37.7	-	AMAD01	219	3103	2906	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299515	GCA_000294835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/835/GCA_000294835.2_ASM29483v2	-	S447
Neisseria gonorrhoeae ATL_2011_01_08	1351782	PRJNA209492	209492	Proteobacteria	Betaproteobacteria	2.13107	52.4	-	ATQG01	337	2422	2168	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02338808	GCA_001025955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/955/GCA_001025955.1_ASM102595v1	-	ATL_2011_01_08
Streptococcus mutans TCI-239	1074168	PRJNA72079	72079	Terrabacteria group	Firmicutes	1.89822	36.8	-	AGLW01	86	1904	1799	10/6/11	3/22/17	Contig	JCVI	SAMN02436609	GCA_000229625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/625/GCA_000229625.2_SMUT6-NEX_57-239	-	TCI-239
Enterococcus faecalis ATCC 4200	565642	PRJNA32923	32923	Terrabacteria group	Firmicutes	3.03617	37.5	-	ACAG01	14	3065	2901	5/28/09	3/22/17	Scaffold	Broad Institute	SAMN02595252	GCA_000157195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/195/GCA_000157195.1_ASM15719v1	-	ATCC 4200
Brucella suis 97-9757	1388741	PRJNA217063	217063	Proteobacteria	Alphaproteobacteria	3.3182	57.2	-	AXMY01	25	3380	3158	10/24/13	4/2/17	Contig	Broad Institute	SAMN02334517	GCA_000480155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/155/GCA_000480155.1_Bruc_suis_97-9757_V1	-	97-9757
Clostridium botulinum BKT028387	929507	PRJNA60411	60411	Terrabacteria group	Firmicutes	2.83382	28	-	AESB01	237	2717	2572	4/14/11	3/22/17	Contig	"National Veterinary Institute (SVA), Sweden"	SAMN02470654	GCA_000204395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/395/GCA_000204395.2_ASM20439v2	21486474	BKT028387
Natranaerobius thermophilus JW/NM-WN-LF	457570	PRJNA20207	20207	Terrabacteria group	Firmicutes	3.19145	36.287	chromosome:NC_010718.1/CP001034.1; plasmid pNTHE01:NC_010715.1/CP001035.1; plasmid pNTHE02:NC_010724.1/CP001036.1	-	3	3004	2883	4/9/08	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598430	GCA_000020005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/005/GCA_000020005.1_ASM2000v1	21642468	JW/NM-WN-LF
Stanieria cyanosphaera PCC 7437	111780	PRJNA158877	158877	Terrabacteria group	Cyanobacteria/Melainabacteria group	5.54499	36.2677	chromosome:NC_019748.1/CP003653.1; plasmid pSTA7437.01:NC_019765.1/CP003654.1; plasmid pSTA7437.02:NC_019749.1/CP003655.1; plasmid pSTA7437.03:NC_019750.1/CP003656.1; plasmid pSTA7437.04:NC_020052.1/CP003657.1; plasmid pSTA7437.05:NC_019766.1/CP003658.1	-	6	4945	4758	12/6/12	4/17/17	Complete Genome	JGI	SAMN02261352	GCA_000317575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/575/GCA_000317575.1_ASM31757v1	-	PCC 7437
Vibrio parahaemolyticus	670	PRJNA275536	275536	Proteobacteria	Gammaproteobacteria	5.21917	45.1	-	JYJS01	155	5028	4784	5/12/15	3/17/17	Scaffold	Health Canada	SAMN03349609	GCA_001006105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/105/GCA_001006105.1_ASM100610v1	-	Oct-51
Streptococcus mitis	28037	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.84967	40.1	-	NCVG01	23	1850	1693	4/18/17	4/21/17	Scaffold	Slagelse Hospital	SAMN06705602	GCA_002096835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/835/GCA_002096835.1_ASM209683v1	27325438	RH_43861_09
Oenococcus oeni IOEB_S450	1428433	PRJNA229567	229567	Terrabacteria group	Firmicutes	1.76212	37.8	-	AZLT01	37	1806	1613	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02904302	GCA_000762165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/165/GCA_000762165.1_Oeoe_IOEB_S450_1.0	24901216	IOEB_S450
Xanthomonas oryzae pv. oryzae	64187	PRJNA269408	269408	Proteobacteria	Gammaproteobacteria	4.24912	63.9	-	JXEE01	449	4219	3398	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252507	GCA_001927635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/635/GCA_001927635.1_ASM192763v1	-	BXO559
Campylobacter fetus subsp. fetus	32019	PRJEB8721	292173	Proteobacteria	delta/epsilon subdivisions	1.78464	34	-	FAVE01	13	1877	1759	11/29/15	4/4/17	Scaffold	SC	SAMEA3310291	GCA_001486805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/486/805/GCA_001486805.1_17150_1_78	-	006A-0091
Xanthomonas citri subsp. citri	611301	PRJEB7154	306111	Proteobacteria	Gammaproteobacteria	5.2894	64.7	-	CCVX01	52	5002	4924	12/16/15	12/16/15	Scaffold	Genoscope CEA	SAMEA2752230	GCA_001490135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/135/GCA_001490135.1_ASX_T_PRJEB7154_v1	-	-
Brucella abortus 355/78	1169204	PRJNA173523	173523	Proteobacteria	Alphaproteobacteria	3.30294	57.2	-	AQIR01	4	3391	3158	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00839720	GCA_000369925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/925/GCA_000369925.1_Bruc_abor_355_78_V1	-	355/78
Francisella tularensis	263	PRJNA244561	244561	Proteobacteria	Gammaproteobacteria	1.8928	32.2	-	JPGP01	1	1973	1647	8/19/14	4/2/17	Scaffold	Los Alamos National Laboratory	SAMN02870045	GCA_000742015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/015/GCA_000742015.1_ASM74201v1	25291764	FTV
Shigella boydii	621	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.48222	50.3	-	NQDL01	192	5798	5333	8/11/17	8/15/17	Contig	JCVI	SAMN07450660	GCA_002248245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/245/GCA_002248245.1_ASM224824v1	-	ECH+23
Clostridioides difficile E19	1215071	PRJEB201	222729	Terrabacteria group	Firmicutes	3.98388	28.3	-	CAMO01	325	3656	3547	10/14/13	3/16/17	Scaffold	LPBA	SAMEA3138918	GCA_000531785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/785/GCA_000531785.1_E19	24482682	E19
Vibrio cholerae HC-48A1	991965	PRJNA63937	63937	Proteobacteria	Gammaproteobacteria	4.03218	47.5	-	AFOL01	208	3822	3668	7/26/11	3/22/17	Scaffold	Institute for Genome Sciences	SAMN00249596	GCA_000221365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/365/GCA_000221365.1_ASM22136v1	-	HC-48A1
Ralstonia solanacearum	305	PRJNA269725	269725	Proteobacteria	Betaproteobacteria	5.55718	66.6	-	JXAZ01	178	5041	4677	5/16/16	4/5/17	Contig	University of Florida MREC	SAMN03256353	GCA_001644815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/815/GCA_001644815.1_ASM164481v1	-	CFBP6783
Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1	527029	PRJNA29727	29727	Terrabacteria group	Firmicutes	6.03148	34.9	chromosome:NZ_CM000755.1/CM000755.1	ACNH01	1	12699	12226	4/30/09	5/18/17	Chromosome	Naval Medical Research Center	SAMN00727679	GCA_000161655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/655/GCA_000161655.1_ASM16165v1	22645259	BGSC 4BA1
Burkholderia mallei	13373	PRJNA244056	244056	Proteobacteria	Betaproteobacteria	5.86986	68.5	-	JPNX02	1	6194	5686	9/23/14	4/3/17	Contig	Los Alamos National Laboratory	SAMN02900561	GCA_000757315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/315/GCA_000757315.2_BMZ_2	25414490	China5
Capnocytophaga canimorsus	28188	PRJNA369395	369395	FCB group	Bacteroidetes/Chlorobi group	2.49383	36.2	chromosome:NZ_CP022388.1/CP022388.1	-	1	2269	2156	9/14/17	9/16/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06289145	GCA_002302445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/445/GCA_002302445.1_ASM230244v1	-	H5594
Aequorivita sublithincola DSM 14238	746697	PRJNA46631	46631	FCB group	Bacteroidetes/Chlorobi group	3.52067	36.2	chromosome:NC_018013.1/CP003280.1	-	1	3218	3134	6/8/12	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02232006	GCA_000265385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/385/GCA_000265385.1_ASM26538v1	-	DSM 14238
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.10026	67	-	MUQS01	181	7686	7248	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001829	GCA_001991315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/315/GCA_001991315.1_ASM199131v1	-	VC8556
Lactobacillus reuteri	1598	PRJNA380292	380292	Terrabacteria group	Firmicutes	2.31353	38.5	-	NBBD01	61	2477	2238	4/27/17	5/3/17	Scaffold	University of Alberta	SAMN06640220	GCA_002112225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/225/GCA_002112225.1_ASM211222v1	28389535	JCM 1081
Bacteroides fragilis str. Ds-233	1339275	PRJNA206106	206106	FCB group	Bacteroidetes/Chlorobi group	5.01607	44	-	JGDG01	557	4466	4098	3/20/14	4/18/17	Contig	IGS	SAMN02314414	GCA_000598805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/805/GCA_000598805.1_ASM59880v1	-	Ds-233
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.6764	50.8	-	CXHL01	393	5125	4481	7/16/15	2/24/17	Contig	SC	SAMEA2004800	GCA_001257095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/095/GCA_001257095.1_8289_7_41	-	75672
Zunongwangia profunda SM-A87	655815	PRJNA38641	38641	FCB group	Bacteroidetes/Chlorobi group	5.12819	36.2	chromosome:NC_014041.1/CP001650.1	-	1	4503	4348	4/21/10	5/19/17	Complete Genome	ShanDong University	SAMN02603855	GCA_000023465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/465/GCA_000023465.1_ASM2346v1	20398413	SMA-87
Bacillus licheniformis	1402	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.17803	46	-	NQLP01	362	4419	4146	8/29/17	8/30/17	Contig	Bielefeld University	SAMN07372717	GCA_002276325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/325/GCA_002276325.1_ASM227632v1	-	7705
Vibrio vulnificus	672	PRJNA281279	281279	Proteobacteria	Gammaproteobacteria	4.91049	46.6	-	MVKS01	137	4572	4347	3/28/17	3/30/17	Contig	"Technische Universitaet Dresden, Medical Faculty 'Carl Gustav Carus'"	SAMN03486856	GCA_002073135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/135/GCA_002073135.1_ASM207313v1	-	VN-0108
Pseudomonas syringae pv. panici str. LMG 2367	1176491	PRJNA160239	160239	Proteobacteria	Gammaproteobacteria	5.99358	59	-	ALAC01	148	5344	4573	7/30/12	8/8/17	Contig	Zhejiang University	SAMN02472179	GCA_000282735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/735/GCA_000282735.1_ASM28273v1	23012277	LMG 2367
Streptococcus suis 86-5192	1214166	PRJNA171426	171426	Terrabacteria group	Firmicutes	2.11017	39.9	-	ALLG01	55	2116	1993	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469537	GCA_000440555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/555/GCA_000440555.1_version1	-	86-5192
Streptococcus agalactiae MC625	1333570	PRJNA203065	203065	Terrabacteria group	Firmicutes	2.0579	35.3	-	ATOV01	40	2097	1998	7/3/13	3/18/17	Scaffold	The Genome Institute	SAMN02436897	GCA_000419135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/135/GCA_000419135.2_S_agalactiaeMC625-1.0	-	MC625
Bacillus cohnii	33932	PRJNA357928	357928	Terrabacteria group	Firmicutes	4.89914	36.1	chromosome:NZ_CP018866.1/CP018866.1	-	1	4920	4705	8/14/17	8/16/17	Complete Genome	Kyungpook National University	SAMN06162173	GCA_002250055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/055/GCA_002250055.1_ASM225005v1	-	DSM 6307
Tetragenococcus halophilus	51669	PRJNA376840	376840	Terrabacteria group	Firmicutes	2.59912	36.1	chromosome:NZ_CP020017.1/CP020017.1	-	1	2533	2344	8/8/17	8/10/17	Complete Genome	Dongduk Women's University	SAMN06448671	GCA_002243535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/535/GCA_002243535.1_ASM224353v1	-	KUD23
Bifidobacterium longum subsp. longum	1679	PRJDB4597	325619	Terrabacteria group	Actinobacteria	2.54024	60.3	-	BCYI01	80	2243	2052	6/10/16	4/5/17	Contig	Yakult Central Institute	SAMD00047619	GCA_001686165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/165/GCA_001686165.1_ASM168616v1	27340092	LO-10
Shigella flexneri 2a	42897	PRJNA279143	279143	Proteobacteria	Gammaproteobacteria	4.64926	50.4	-	LAJQ01	419	5272	4408	7/21/15	3/5/17	Contig	U.S. Food and Drug Administration	SAMN03438035	GCA_001184075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/075/GCA_001184075.1_ASM118407v1	-	BS1039
Bacillus anthracis 9080-G	1412842	PRJNA224558	224558	Terrabacteria group	Firmicutes	5.50866	35.2631	chromosome:NZ_CM002398.1/CM002398.1; plasmid pXO1:NZ_CM002399.1/CM002399.1; plasmid pXO2:NZ_CM002400.1/CM002400.1	AZUE01	3	6158	5701	2/5/14	3/24/17	Chromosome	"Center for Microbial Genetics and Genomics, Northern Arizona University"	SAMN02951869	GCA_000558985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/985/GCA_000558985.1_Ba9080G_1.0	-	9080-G
Pseudomonas putida	303	PRJNA318796	318796	Proteobacteria	Gammaproteobacteria	5.99654	63	-	MCBI01	77	5509	5305	8/8/16	4/5/17	Contig	University of Pittsburgh	SAMN04867885	GCA_001700655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/655/GCA_001700655.1_ASM170065v1	-	PSP3
Leptospira interrogans serovar Canicola str. Fiocruz LV133	1193014	PRJNA167235	167235	Spirochaetes	Spirochaetia	4.71985	35	-	AKWU02	89	4276	3804	10/17/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436487	GCA_000306135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/135/GCA_000306135.2_gls454069v2.0	-	Fiocruz LV133
Bartonella sp. Raccoon60	1933912	PRJNA360985	360985	Proteobacteria	Alphaproteobacteria	1.6157	36.1	chromosome:NZ_CP019786.1/CP019786.1	-	1	1418	1259	3/7/17	3/10/17	Complete Genome	University of Basel	SAMN06213874	GCA_002022585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/585/GCA_002022585.1_ASM202258v1	-	Raccoon60
Caldicellulosiruptor lactoaceticus 6A	632516	PRJNA40219	40219	Terrabacteria group	Firmicutes	2.67481	36.1	chromosome:NC_015949.1/CP003001.1	-	1	2536	2256	8/22/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713563	GCA_000193435.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/435/GCA_000193435.3_ASM19343v3	-	6A
Capnocytophaga canimorsus Cc5	860228	PRJNA50199	50199	FCB group	Bacteroidetes/Chlorobi group	2.57141	36.1	chromosome:NC_015846.1/CP002113.1	-	1	2298	2183	7/14/11	4/7/17	Complete Genome	"BIOZENTRUM, Basel university, Switzerland"	SAMN02603043	GCA_000220625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/625/GCA_000220625.1_ASM22062v1	"2,176,221,921,914,870"	Cc5
Streptococcus pneumoniae PNI0009	1159091	PRJNA89185	89185	Terrabacteria group	Firmicutes	2.04334	39.7	-	AKRE01	181	2288	2005	1/29/13	3/9/17	Scaffold	Washington University	SAMN02299527	GCA_000334715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/715/GCA_000334715.1_ASM33471v1	-	PNI0009
Caldicellulosiruptor hydrothermalis 108	632292	PRJNA40831	40831	Terrabacteria group	Firmicutes	2.77068	36.1	chromosome:NC_014652.1/CP002219.1	-	1	2673	2542	11/10/10	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713562	GCA_000166355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/355/GCA_000166355.1_ASM16635v1	21216991	108
Caldicellulosiruptor kristjanssonii I77R1B	632335	PRJNA41727	41727	Terrabacteria group	Firmicutes	2.80244	36.0983	chromosome:NC_014721.1/CP002326.1; plasmid pCALKR01:NC_014719.1/CP002327.1	-	2	2672	2475	11/17/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713564	GCA_000166695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/695/GCA_000166695.1_ASM16669v1	21216991	I77R1B
Haemophilus influenzae	727	PRJNA285218	285218	Proteobacteria	Gammaproteobacteria	1.84967	38.1	-	LFFU01	41	1870	1749	7/21/15	3/26/17	Contig	University of Oklahoma Health Sciences Center	SAMN03702705	GCA_001184545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/545/GCA_001184545.1_ASM118454v1	26390432	HI1722
Mycobacterium bovis	1765	PRJNA362881	362881	Terrabacteria group	Actinobacteria	4.3087	65.6	-	MTZS01	155	4240	4006	3/14/17	4/27/17	Contig	Réseau français de Santé Animale	SAMN06250738	GCA_002026325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/325/GCA_002026325.1_ASM202632v1	-	D11-03130
Mycobacterium avium MAV_061107_1842	1335418	PRJNA203573	203573	Terrabacteria group	Actinobacteria	5.32095	69.1	-	JAOQ01	16	5004	4698	1/27/14	4/2/17	Contig	Institute for Genome Sciences	SAMN02641621	GCA_000523655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/655/GCA_000523655.1_ASM52365v1	-	MAV_061107_1842
Clostridium perfringens	1502	PRJNA327457	327457	Terrabacteria group	Firmicutes	3.65752	28	-	MASE01	46	3372	3203	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323906	GCA_001949775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/775/GCA_001949775.1_ASM194977v1	28062388	JFP983
Xanthomonas campestris pv. durantae	487862	PRJNA298606	298606	Proteobacteria	Gammaproteobacteria	5.4183	64.7	-	LOKP01	187	5029	4584	3/6/17	3/9/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN04145199	GCA_002019265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/265/GCA_002019265.1_ASM201926v1	-	LMG696
Lactococcus lactis subsp. cremoris	1359	PRJNA277805	277805	Terrabacteria group	Firmicutes	2.60534	35.4	-	JZUI01	103	2672	2407	4/6/15	4/3/17	Contig	University of Eastern Finland	SAMN03396775	GCA_000969475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/475/GCA_000969475.1_ASM96947v1	25999570	Mast36
Bacillus cereus MM3	526971	PRJNA29653	29653	Terrabacteria group	Firmicutes	5.54706	35.2	chromosome:NZ_CM000718.1/CM000718.1	ACLW01	1	11561	11109	4/30/09	6/15/17	Chromosome	Naval Medical Research Center	SAMN00727654	GCA_000160955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/955/GCA_000160955.1_ASM16095v1	22645259	MM3
Staphylococcus epidermidis NIHLM018	979215	PRJNA62379	62379	Terrabacteria group	Firmicutes	2.47774	32	-	AKGY01	64	2496	2310	7/9/12	3/23/17	Contig	NISC - NIH Intramural Sequencing Center	SAMN00993287	GCA_000276225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/225/GCA_000276225.1_ASM27622v1	-	NIHLM018
Capnocytophaga sp. H2931	1945657	PRJNA369395	369395	FCB group	Bacteroidetes/Chlorobi group	2.63297	36	chromosome:NZ_CP022381.1/CP022381.1	-	1	2233	2141	9/14/17	9/16/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06289153	GCA_002302535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/535/GCA_002302535.1_ASM230253v1	-	H2931
Yersinia pestis	632	PRJNA288599	288599	Proteobacteria	Gammaproteobacteria	4.72887	47.6	-	LGRJ01	6	4580	4259	8/6/15	3/26/17	Scaffold	Los Alamos National Laboratory	SAMN03816156	GCA_001261985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/985/GCA_001261985.1_YPW_3_IHQD	26383662	EV76D
Pseudomonas fluorescens	294	PRJNA264639	264639	Proteobacteria	Gammaproteobacteria	6.50701	60.5	-	JTGH01	47	5913	5756	1/14/15	4/3/17	Contig	University of Massachusetts Dartmouth	SAMN03140176	GCA_000817905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/905/GCA_000817905.1_ASM81790v1	25814613	SF4c
Marinifilaceae bacterium SPP2	1717717	PRJDB5655	389554	FCB group	Bacteroidetes/Chlorobi group	5.71899	36	chromosome:AP018042.1	-	1	4436	4331	6/6/17	7/21/17	Complete Genome	"The Institute of Low Temperature Science, Hokkaido University"	SAMD00078003	GCA_002356295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/295/GCA_002356295.1_ASM235629v1	-	SPP2
Flavobacterium crassostreae	1763534	PRJNA340213	340213	FCB group	Bacteroidetes/Chlorobi group	3.02732	36	chromosome:NZ_CP017688.1/CP017688.1	-	1	2727	2613	10/24/16	4/13/17	Complete Genome	Korea University	SAMN05695074	GCA_001831475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/475/GCA_001831475.1_ASM183147v1	-	LPB0076
Tetragenococcus halophilus	51669	PRJNA289198	289198	Terrabacteria group	Firmicutes	2.38947	36	chromosome:NZ_CP012047.1/CP012047.1	-	1	2338	2174	8/25/16	4/13/17	Complete Genome	Chung-Ang university	SAMN03846930	GCA_001712815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/815/GCA_001712815.1_ASM171281v1	-	MJ4
Staphylococcus simulans	1286	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.64755	36	chromosome:NZ_CP014016.1/CP014016.1	-	1	2540	2404	2/11/16	4/11/17	Complete Genome	US Food and Drug Administration 	SAMN03996269	GCA_001559115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/115/GCA_001559115.1_ASM155911v1	-	FDAARGOS_124
Staphylococcus schleiferi	1295	PRJNA265120	265120	Terrabacteria group	Firmicutes	2.41976	36	chromosome:NZ_CP009762.1/CP009762.1	-	1	2284	2153	7/30/15	4/10/17	Complete Genome	Center for Host Microbe Interactions	SAMN03145672	GCA_001188895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/895/GCA_001188895.1_ASM118889v1	26358596	2142-05
candidate division TM6 bacterium GW2011_GWF2_28_16	1619077	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.853053	36	chromosome:CP011212.1	-	1	902	855	6/19/15	9/21/17	Complete Genome	"Banfield Lab, University of California, Berkeley"	SAMN03319330	GCA_001029715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/715/GCA_001029715.1_ASM102971v1	-	-
Pseudomonas fluorescens	294	PRJNA270653	270653	Proteobacteria	Gammaproteobacteria	5.91424	60.2	-	JXQY01	58	5228	5072	2/9/15	4/3/17	Contig	University of Chicago	SAMN03267960	GCA_000834545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/545/GCA_000834545.1_ASM83454v1	-	MEP34
Yersinia pestis subsp. microtus bv. Xilingolensis	1679171	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.58786	47.5	-	LIYR01	230	4308	3902	9/21/15	3/26/17	Scaffold	SRCAMB	SAMN03839877	GCA_001294805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/805/GCA_001294805.1_ASM129480v1	26634751	SCPM-O-B-6216
Tetragenococcus halophilus NBRC 12172	945021	PRJNA41613	41613	Terrabacteria group	Firmicutes	2.56272	36	chromosome:NC_016052.1/AP012046.1	-	1	2550	2382	10/1/11	4/7/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00061109	GCA_000283615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/615/GCA_000283615.1_ASM28361v1	-	NBRC 12172
Staphylococcus epidermidis NIHLM031	979214	PRJNA62377	62377	Terrabacteria group	Firmicutes	2.53393	32	-	AKGX01	64	2525	2291	7/9/12	3/23/17	Contig	NISC - NIH Intramural Sequencing Center	SAMN00993286	GCA_000276245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/245/GCA_000276245.1_ASM27624v1	-	NIHLM031
Bacillus cereus AH621	526972	PRJNA29655	29655	Terrabacteria group	Firmicutes	5.67481	35.2	chromosome:NZ_CM000719.1/CM000719.1	ACLX01	1	11780	11271	4/30/09	6/15/17	Chromosome	Naval Medical Research Center	SAMN00716180	GCA_000160975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/975/GCA_000160975.1_ASM16097v1	22645259	AH621
Lactococcus lactis subsp. lactis bv. diacetylactis	44688	PRJNA295856	295856	Terrabacteria group	Firmicutes	2.57372	35	-	LKPE01	83	2709	2459	12/2/15	4/4/17	Contig	IBR	SAMN04091128	GCA_001455265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/265/GCA_001455265.1_ASM145526v1	26847906	CRL264
Xanthomonas campestris pv. vitistrifoliae	487901	PRJNA298596	298596	Proteobacteria	Gammaproteobacteria	5.07088	64.7	-	LOKH01	184	4643	4156	3/6/17	3/9/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN04145189	GCA_002019295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/295/GCA_002019295.1_ASM201929v1	-	LMG940
Clostridium perfringens	1502	PRJNA327459	327459	Terrabacteria group	Firmicutes	3.65787	28	-	MASG01	70	3370	3203	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323908	GCA_001949795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/795/GCA_001949795.1_ASM194979v1	28062388	JFP992
Mycobacterium avium MAV_120709_2344	1335419	PRJNA203574	203574	Terrabacteria group	Actinobacteria	5.6285	68.8	-	JAOP01	62	5353	4925	1/27/14	4/2/17	Contig	Institute for Genome Sciences	SAMN02641622	GCA_000523755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/755/GCA_000523755.1_ASM52375v1	-	MAV_120709_2344
Mycobacterium bovis	1765	PRJNA362881	362881	Terrabacteria group	Actinobacteria	4.29445	65.6	-	MTZQ01	191	4258	3973	3/14/17	4/27/17	Contig	Réseau français de Santé Animale	SAMN06250728	GCA_002026395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/395/GCA_002026395.1_ASM202639v1	-	D11-01601
Haemophilus influenzae	727	PRJNA285226	285226	Proteobacteria	Gammaproteobacteria	1.76105	37.8	-	LFFO01	20	1750	1622	7/21/15	3/26/17	Contig	University of Oklahoma Health Sciences Center	SAMN03702713	GCA_001184555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/555/GCA_001184555.1_ASM118455v1	26404588	HI1980
Picrophilus torridus DSM 9790	263820	PRJNA10641	10641	Euryarchaeota	Thermoplasmata	1.5459	36	chromosome:NC_005877.1/AE017261.1	-	1	1616	1563	6/8/04	4/17/17	Complete Genome	"Institut of Microbiology and Genetics, University of Goettingen"	SAMN02603345	GCA_000008265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/265/GCA_000008265.1_ASM826v1	15184674	DSM 9790
Capnocytophaga stomatis	1848904	PRJNA369395	369395	FCB group	Bacteroidetes/Chlorobi group	2.83135	35.9	chromosome:NZ_CP022387.1/CP022387.1	-	1	2521	2446	9/14/17	9/16/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06289146	GCA_002302635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/635/GCA_002302635.1_ASM230263v1	-	H2177
Streptococcus pneumoniae PNI0010	1159092	PRJNA89187	89187	Terrabacteria group	Firmicutes	2.0768	39.9	-	AKRF01	21	2281	2032	1/29/13	3/9/17	Scaffold	Washington University	SAMN02299528	GCA_000334735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/735/GCA_000334735.1_ASM33473v1	-	PNI0010
Chryseobacterium indologenes	253	PRJNA357031	357031	FCB group	Bacteroidetes/Chlorobi group	5.31475	35.9	chromosome:NZ_CP018786.1/CP018786.1	-	1	4812	4657	3/13/17	3/15/17	Complete Genome	Harvard University	SAMN06130963	GCA_002025665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/665/GCA_002025665.1_ASM202566v1	28275097	AA5
Elizabethkingia genomosp. 3	1756149	PRJNA326741	326741	FCB group	Bacteroidetes/Chlorobi group	4.43352	35.9	chromosome:NZ_CP014337.1/CP014337.1	-	1	4127	4007	3/10/17	3/13/17	Complete Genome	CDC	SAMN05277827	GCA_002024805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/805/GCA_002024805.1_ASM202480v1	-	G0146
Maribacter sp. 1_2014MBL_MicDiv	1644130	PRJNA281767	281767	FCB group	Bacteroidetes/Chlorobi group	4.39961	35.9	chromosome:NZ_CP011318.1/CP011318.1	-	1	3786	3701	11/3/16	4/13/17	Complete Genome	UC Davis	SAMN03496287	GCA_001865655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/655/GCA_001865655.1_ASM186565v1	-	1_2014MBL_MicDiv
Leptospira interrogans serovar Valbuzzi str. Valbuzzi	1193044	PRJNA167224	167224	Spirochaetes	Spirochaetia	4.53979	34.9	-	AKXF02	39	4176	3647	10/17/12	4/10/17	Contig	J. Craig Venter Institute	SAMN02436490	GCA_000306155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/155/GCA_000306155.2_gls454012v02	-	Valbuzzi
Pseudomonas putida	303	PRJNA318784	318784	Proteobacteria	Gammaproteobacteria	5.99306	63	-	MCBG01	64	5516	5306	8/8/16	4/5/17	Contig	University of Pittsburgh	SAMN04867679	GCA_001700665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/665/GCA_001700665.1_ASM170066v1	-	PSP1
Bacillus anthracis 52-G	1412844	PRJNA224563	224563	Terrabacteria group	Firmicutes	5.50444	35.2647	chromosome:NZ_CM002395.1/CM002395.1; plasmid pXO1:NZ_CM002396.1/CM002396.1; plasmid pXO2:NZ_CM002397.1/CM002397.1	AZUF01	3	6134	5723	2/5/14	3/24/17	Chromosome	"Center for Microbial Genetics and Genomics, Northern Arizona University"	SAMN02951870	GCA_000559005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/005/GCA_000559005.1_Ba52G_1.0	-	52-G
Shigella flexneri 2a	42897	PRJNA279143	279143	Proteobacteria	Gammaproteobacteria	4.65968	50.4	-	LAJU01	473	5253	4381	7/21/15	3/5/17	Contig	U.S. Food and Drug Administration	SAMN03438039	GCA_001184125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/125/GCA_001184125.1_ASM118412v1	-	BS1059
Bifidobacterium longum subsp. longum	1679	PRJDB4597	325619	Terrabacteria group	Actinobacteria	2.65603	60.1	-	BCYJ01	71	2242	2054	6/10/16	4/5/17	Contig	Yakult Central Institute	SAMD00047620	GCA_001686185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/185/GCA_001686185.1_ASM168618v1	27340092	LO-21
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.27514	35.9	chromosome I:NZ_LT545678.1/LT545678.1	-	1	2320	2106	9/30/16	3/20/17	Complete Genome	INSTITUT PASTEUR	SAMEA3888151	GCA_900078265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/265/GCA_900078265.1_SA111	-	-
Staphylococcus schleiferi	1295	PRJDB4158	296412	Terrabacteria group	Firmicutes	2.52808	35.9	chromosome Unknown:NZ_AP014944.1/AP014944.1	-	1	2406	2283	9/17/15	4/11/17	Complete Genome	Juntendo University	SAMD00039081	GCA_001548255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/255/GCA_001548255.1_ASM154825v1	26514766	TSCC54
Streptococcus agalactiae MC624	1333569	PRJNA203064	203064	Terrabacteria group	Firmicutes	2.05811	35.3	-	ATOW01	37	2097	2005	7/3/13	3/18/17	Scaffold	The Genome Institute	SAMN02436826	GCA_000419155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/155/GCA_000419155.2_S_agalactiaeMC624-1.0	-	MC624
Streptococcus suis 8830	1214157	PRJNA171429	171429	Terrabacteria group	Firmicutes	2.19679	40.8	-	ALLH01	50	2235	2074	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469523	GCA_000440575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/575/GCA_000440575.1_version1	-	8830
Pseudomonas syringae pv. actinidiae ICMP 18744	1104680	PRJNA74967	74967	Proteobacteria	Gammaproteobacteria	6.23561	58.5	-	ANGD01	442	5981	5475	2/27/13	5/19/17	Contig	University of Otago	SAMN02471919	GCA_000342185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/185/GCA_000342185.1_ICMP18744PSA1.0	-	ICMP 18744
Vibrio vulnificus	672	PRJNA281280	281280	Proteobacteria	Gammaproteobacteria	5.08767	46.6	-	MVKT01	181	4702	4465	3/28/17	3/30/17	Contig	"Technische Universitaet Dresden, Medical Faculty 'Carl Gustav Carus'"	SAMN03486858	GCA_002073145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/145/GCA_002073145.1_ASM207314v1	-	VN-0112
Bacillus licheniformis	1402	PRJNA397530	397530	Terrabacteria group	Firmicutes	4.25356	45.8	-	NQLG01	457	4577	4226	9/6/17	9/8/17	Contig	CSIR-National Environmental Engineering Research Institute (CSIR-NEERI)	SAMN07460323	GCA_002287385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/385/GCA_002287385.1_ASM228738v1	-	AAK_S4
Staphylococcus schleiferi	1295	PRJNA260936	260936	Terrabacteria group	Firmicutes	2.43563	35.9	chromosome:NZ_CP009470.1/CP009470.1	-	1	2300	2152	7/30/15	4/10/17	Complete Genome	Center for Host Microbe Interactions	SAMN03067536	GCA_001188855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/855/GCA_001188855.1_ASM118885v1	26358596	1360-13
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.73106	50.7	-	CXHH01	420	5346	4561	7/17/15	2/24/17	Contig	SC	SAMEA1324244	GCA_001257115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/115/GCA_001257115.1_7655_8_7	-	H112540447
Bacteroides fragilis str. 2-F-2 #4	1339280	PRJNA206111	206111	FCB group	Bacteroidetes/Chlorobi group	5.57659	43.4	-	JGDM01	213	5045	4636	3/20/14	4/18/17	Contig	IGS	SAMN02314421	GCA_000598825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/825/GCA_000598825.1_ASM59882v1	-	2-F-2 #4
Lactobacillus reuteri	1598	PRJNA380292	380292	Terrabacteria group	Firmicutes	1.95205	38.6	-	NBBE01	107	1981	1770	4/27/17	5/3/17	Scaffold	University of Alberta	SAMN06640222	GCA_002112245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/245/GCA_002112245.1_ASM211224v1	28389535	CSF8
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.20844	67	-	MUQT01	173	7806	7319	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001830	GCA_001991325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/325/GCA_001991325.1_ASM199132v1	-	VC9612
Staphylococcus schleiferi	1295	PRJNA263923	263923	Terrabacteria group	Firmicutes	2.5284	35.9	chromosome:NZ_CP009676.1/CP009676.1	-	1	2425	2290	7/30/15	4/10/17	Complete Genome	Center for Host Microbe Interactions	SAMN03108617	GCA_001188875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/875/GCA_001188875.1_ASM118887v1	26358596	5909-02
Sulfolobus solfataricus	2287	PRJNA279939	279939	TACK group	Crenarchaeota	2.72726	35.9	chromosome:NZ_CP011055.1/CP011055.1	-	1	2971	2701	4/2/15	4/3/17	Complete Genome	University of Nebraska-Lincoln	SAMN03452281	GCA_000968355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/355/GCA_000968355.1_ASM96835v1	26021927	SULB
Burkholderia mallei	13373	PRJNA257008	257008	Proteobacteria	Betaproteobacteria	5.65058	68.5	-	LBFF01	263	5961	5436	5/1/15	4/3/17	Contig	µFORGE	SAMN03418621	GCA_000986905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/986/905/GCA_000986905.1_BMAL002-SEQ-1-ASM-1	-	Ivan
Bacillus thuringiensis serovar huazhongensis BGSC 4BD1	527030	PRJNA29729	29729	Terrabacteria group	Firmicutes	6.2312	34.6501	chromosome:NZ_CM000756.1/CM000756.1	ACNI01	1	12596	12010	4/30/09	5/18/17	Chromosome	Naval Medical Research Center	SAMN00727681	GCA_000161675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/675/GCA_000161675.1_ASM16167v1	22645259	BGSC 4BD1
Ralstonia solanacearum	305	PRJNA269725	269725	Proteobacteria	Betaproteobacteria	5.39639	66.9	-	JXBA01	399	4974	4400	5/16/16	4/5/17	Contig	University of Florida MREC	SAMN03256358	GCA_001644855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/855/GCA_001644855.1_ASM164485v1	-	CFBP3059
Vibrio cholerae HC-70A1	991984	PRJNA63975	63975	Proteobacteria	Gammaproteobacteria	4.05743	47.5	-	AFON01	169	3832	3694	7/26/11	3/22/17	Scaffold	Institute for Genome Sciences	SAMN00249594	GCA_000221385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/385/GCA_000221385.1_ASM22138v1	-	HC-70A1
Clostridioides difficile E1	1225722	PRJEB190	238025	Terrabacteria group	Firmicutes	3.94572	28.8	-	CAMD01	212	3652	3496	10/14/13	3/16/17	Scaffold	LPBA	SAMEA3138953	GCA_000582865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/865/GCA_000582865.1_E1	24482682	E1
Shigella boydii	621	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.02971	50.5	-	NQCL01	151	5287	4910	8/11/17	8/15/17	Contig	JCVI	SAMN07450677	GCA_002248875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/875/GCA_002248875.1_ASM224887v1	-	ECH+06
Francisella tularensis	263	PRJNA244554	244554	Proteobacteria	Gammaproteobacteria	1.85549	32.3	-	JOOR01	1	1902	1636	8/19/14	4/2/17	Scaffold	Los Alamos National Laboratory	SAMN02869888	GCA_000742075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/075/GCA_000742075.1_ASM74207v1	25291764	FAE
Brucella abortus 544	1169205	PRJNA173507	173507	Proteobacteria	Alphaproteobacteria	3.29686	57.2	-	AQIS01	3	3386	3155	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00839704	GCA_000369945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/945/GCA_000369945.1_Bruc_abor_544_V1	-	544
Xanthomonas citri subsp. citri	611301	PRJEB7146	306103	Proteobacteria	Gammaproteobacteria	5.20116	64.7	-	CCVY01	46	4910	4837	12/16/15	12/16/15	Scaffold	Genoscope CEA	SAMEA2752224	GCA_001490855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/855/GCA_001490855.1_ASX_H_PRJEB7146_v1	-	-
Campylobacter fetus subsp. fetus	32019	PRJEB8721	292173	Proteobacteria	delta/epsilon subdivisions	1.7557	34	-	FAUZ01	25	1837	1733	11/29/15	4/4/17	Scaffold	SC	SAMEA3310292	GCA_001486825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/486/825/GCA_001486825.1_17150_1_79	-	006A-0113
Xanthomonas oryzae pv. oryzae	64187	PRJNA269414	269414	Proteobacteria	Gammaproteobacteria	4.27508	63.9	-	JXEK01	485	4217	3426	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252513	GCA_001927685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/685/GCA_001927685.1_ASM192768v1	-	DXO-015
Oenococcus oeni S12	1428436	PRJNA229617	229617	Terrabacteria group	Firmicutes	1.81362	37.8	-	AZLH01	35	1838	1687	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02904290	GCA_000762185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/185/GCA_000762185.1_Oeoe_S12_1.0	24901216	S12
Streptococcus mitis	28037	PRJNA304678	304678	Terrabacteria group	Firmicutes	2.06398	39.8	-	NCVK01	60	2090	1892	4/18/17	4/21/17	Scaffold	Slagelse Hospital	SAMN06705598	GCA_002096845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/845/GCA_002096845.1_ASM209684v1	27325438	OD_317805_11
Vibrio parahaemolyticus	670	PRJNA275536	275536	Proteobacteria	Gammaproteobacteria	5.21702	45.2	-	JYJQ01	148	5073	4808	5/12/15	3/17/17	Scaffold	Health Canada	SAMN03349607	GCA_001006115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/115/GCA_001006115.1_ASM100611v1	-	Sep-63
Sulfolobus solfataricus	2287	PRJNA277733	277733	TACK group	Crenarchaeota	2.72731	35.9	chromosome:NZ_CP011056.1/CP011056.1	-	1	2922	2713	4/2/15	8/20/15	Complete Genome	University of Nebraska-Lincoln	SAMN03395044	GCA_000968395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/395/GCA_000968395.1_ASM96839v1	26021927	98/2 SULC
Sulfolobus solfataricus	2287	PRJNA279935	279935	TACK group	Crenarchaeota	2.72734	35.9	chromosome:NZ_CP011057.1/CP011057.1	-	1	2967	2695	4/2/15	4/3/17	Complete Genome	University of Nebraska-Lincoln	SAMN03452280	GCA_000968435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/435/GCA_000968435.1_ASM96843v1	26021927	SULA
Clostridium botulinum CFSAN001628	1232188	PRJNA175309	175309	Terrabacteria group	Firmicutes	4.01363	28	-	AMXJ02	246	3920	3124	10/22/12	3/23/17	Contig	FDA	SAMN01816399	GCA_000307655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/655/GCA_000307655.2_CFSAN0001628_2.0	23409268	CFSAN001628
Streptococcus agalactiae	1311	PRJNA243854	243854	Terrabacteria group	Firmicutes	2.2143	35.9	chromosome:NZ_CP007571.1/CP007571.1	-	1	2275	2099	8/21/14	3/16/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05771130	GCA_000831125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/125/GCA_000831125.1_ASM83112v1	25053786	GBS2-NM
Enterococcus faecalis DS5	565643	PRJNA32925	32925	Terrabacteria group	Firmicutes	3.18642	37.3	-	ACAI01	43	3261	3083	6/12/09	3/22/17	Scaffold	Broad Institute	SAMN02595254	GCA_000157235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/235/GCA_000157235.1_ASM15723v1	-	DS5
Streptococcus mutans TCI-242	1074169	PRJNA72081	72081	Terrabacteria group	Firmicutes	1.9144	36.8	-	AGLX01	61	1929	1834	10/6/11	3/22/17	Contig	JCVI	SAMN02436455	GCA_000229645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/645/GCA_000229645.2_SMUT6-NEX_62-242	-	TCI-242
Neisseria gonorrhoeae NYC_2011_05_13	1351796	PRJNA209522	209522	Proteobacteria	Betaproteobacteria	2.10534	52.4	-	ATQU01	346	2380	2126	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02338822	GCA_001026035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/035/GCA_001026035.1_ASM102603v1	-	NYC_2011_05_13
Enterococcus faecium R501	1134839	PRJNA82067	82067	Terrabacteria group	Firmicutes	3.00397	38	-	AMAE01	247	3085	2914	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299514	GCA_000294855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/855/GCA_000294855.2_ASM29485v2	-	R501
Chlamydia psittaci str. Frances	1050220	PRJNA68345	68345	PVC group	Chlamydiae	1.16967	38.9606	plasmid unnamed:NZ_CM003518.1/CM003518.1	AFVM01	3	1035	962	10/21/15	4/4/17	Scaffold	CDC	SAMN04201206	GCA_001401485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/485/GCA_001401485.1_ASM140148v1	25887617	Frances
Bacillus amyloliquefaciens	1390	PRJNA392432	392432	Terrabacteria group	Firmicutes	3.90693	46	-	NMRK01	34	4085	3681	7/24/17	7/24/17	Scaffold	"Navsari Agricultural University, Surat-395007"	SAMN07299096	GCA_002224045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/045/GCA_002224045.1_ASM222404v1	-	KCP2
Stenotrophomonas maltophilia	40324	PRJNA285410	285410	Proteobacteria	Gammaproteobacteria	4.33473	66.6	-	LDVR01	180	4011	3870	8/31/15	3/26/17	Contig	University of Queensland	SAMN03753636	GCA_001276355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/355/GCA_001276355.1_ASM127635v1	-	B4
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.13955	41.2	-	CWFA01	79	2084	1900	6/24/15	3/26/17	Contig	SC	SAMEA1032804	GCA_001175865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/865/GCA_001175865.1_6903_8_65	-	EQUI0211
Pasteurella multocida	747	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	2.43843	40.5	-	NBTI01	7	2379	2181	4/10/17	4/13/17	Contig	US Food and Drug Administration 	SAMN04875554	GCA_002083265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/265/GCA_002083265.1_ASM208326v1	-	FDAARGOS_217
Lactobacillus rhamnosus	47715	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.04634	46.6	-	JUKV01	167	3044	2860	7/10/15	4/3/17	Contig	University of Washington	SAMN03198209	GCA_001068045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/045/GCA_001068045.1_ASM106804v1	26230489	988_LRHA
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.30364	57.1714	chromosome 1:NZ_CP018508.1/CP018508.1; chromosome 2:NZ_CP018509.1/CP018509.1	-	2	3372	3137	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932922	GCA_002191935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/935/GCA_002191935.1_ASM219193v1	28388689	BwIM_SOM_36b
Streptococcus agalactiae	1311	PRJNA243853	243853	Terrabacteria group	Firmicutes	2.24371	35.9	chromosome:NZ_CP007570.1/CP007570.1	-	1	2300	2120	8/21/14	3/16/17	Complete Genome	Centers for Disease Control and Prevention	SAMN02720890	GCA_000831145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/145/GCA_000831145.1_ASM83114v1	25053786	GBS1-NY
Bordetella bronchiseptica CA90 BB1334	1331203	PRJNA202115	202115	Proteobacteria	Betaproteobacteria	5.26916	68.2	-	JGWR01	120	5053	4766	5/12/14	4/2/17	Contig	JCVI	SAMN02263909	GCA_000690435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/435/GCA_000690435.1_gbb07v01	25908122	CA90 BB1334
Corynebacterium diphtheriae	1717	PRJNA296457	296457	Terrabacteria group	Actinobacteria	2.4457	53.7	-	LJXS01	45	2375	2153	12/21/16	4/6/17	Contig	Northumbria University	SAMN04099184	GCA_001913255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/255/GCA_001913255.1_CdipDSM43989	-	DSM 43989
Mycoplasma pneumoniae	2104	PRJNA267612	267612	Terrabacteria group	Tenericutes	0.802909	39.8	-	JTHA01	18	794	694	12/2/15	4/4/17	Scaffold	Capital Institute of Pediatrics	SAMN03142257	GCA_001455685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/685/GCA_001455685.1_ASM145568v1	-	CIP12235
Yersinia enterocolitica	630	PRJNA359203	359203	Proteobacteria	Gammaproteobacteria	4.78324	47.1	-	MTHH01	34	4469	4279	2/10/17	3/29/17	Contig	"Istituto Zooprofilattico Sperimentale del Piemonte, Liguria e Valle d'Aosta"	SAMN06187707	GCA_001995075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/075/GCA_001995075.1_ASM199507v1	-	Y3wildboar1A
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.00686	41.6	-	JJQN01	204	3485	3266	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708979	GCA_000979995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/979/995/GCA_000979995.1_gtlEnvA5udCFS	25756680	1.H.A.2.6
Serratia marcescens	615	PRJNA256271	256271	Proteobacteria	Gammaproteobacteria	5.29878	59.1	-	JPQY01	103	5050	4845	8/7/14	3/24/17	Contig	University of the Witwatersrand	SAMN02942804	GCA_000738535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/535/GCA_000738535.1_ASM73853v1	25237022	MCB
Lactobacillus plantarum	1590	PRJNA305628	305628	Terrabacteria group	Firmicutes	3.29448	44.4	-	LOMH01	171	3268	3039	3/21/16	3/28/17	Scaffold	Vavilov Institute of General Genetics	SAMN04329467	GCA_001595615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/615/GCA_001595615.1_ASM159561v1	-	43-3
Mannheimia haemolytica	75985	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.64959	41	-	LQEP01	135	2746	2572	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366537	GCA_001930505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/505/GCA_001930505.1_ASM193050v1	-	2612MH
Campylobacter coli 1961	887298	PRJNA52733	52733	Proteobacteria	delta/epsilon subdivisions	1.72817	31.2	-	AING01	127	1794	1690	3/16/12	3/18/17	Contig	Cornell University	SAMN02428972	GCA_000253895.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/895/GCA_000253895.3_ASM25389v3	-	1961
Burkholderia sp. BDU8	1385592	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.25136	66.5	-	LOWE01	135	6888	6234	1/21/16	4/11/17	Contig	Northern Arizona University	SAMN03449222	GCA_001522635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/635/GCA_001522635.1_ASM152263v1	-	BDU8
Propionibacterium acnes HL110PA2	765078	PRJNA49189	49189	Terrabacteria group	Actinobacteria	2.50237	60.1	-	ADYY01	14	2519	2391	7/30/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189248	GCA_000144815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/815/GCA_000144815.1_ASM14481v1	-	HL110PA2
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.43332	32.6	-	CUEJ01	78	2416	2293	3/31/15	3/26/17	Contig	SC	SAMEA1035068	GCA_001232865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/865/GCA_001232865.1_7067_4_74	-	51-55
Proteus mirabilis	584	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.95917	38.8	-	JVTJ01	168	3625	3499	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197311	GCA_001062745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/745/GCA_001062745.1_ASM106274v1	26230489	1330_PMIR
Enterobacter cloacae BIDMC 33A	1328422	PRJNA202044	202044	Proteobacteria	Gammaproteobacteria	5.1787	54.9	-	JZKC01	9	5131	4857	3/9/15	3/25/17	Scaffold	Broad Institute	SAMN02138663	GCA_000949365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/365/GCA_000949365.1_Ente_cloa_BIDMC_33A_V1	-	BIDMC 33A
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.88211	54.9	-	FKZB01	70	5680	5425	5/19/16	2/25/17	Scaffold	SC	SAMEA2273601	GCA_900083675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/675/GCA_900083675.1_12045_6_65	-	2880STDY5682516
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.45654	56.8	-	MRXE01	213	4468	4127	3/31/17	4/6/17	Contig	FDA/CFSAN	SAMN06100266	GCA_002075505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/505/GCA_002075505.1_ASM207550v1	-	MOD1-Md40g
Lactobacillus salivarius	1624	PRJNA357984	357984	Terrabacteria group	Firmicutes	1.92063	32.9	-	NBEJ01	48	1890	1761	4/5/17	4/8/17	Scaffold	University College Cork	SAMN06163264	GCA_002079525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/525/GCA_002079525.1_ASM207952v1	-	JCM 1040
Mycobacterium abscessus subsp. bolletii 2B-0912-R	1001711	PRJNA65153	65153	Terrabacteria group	Actinobacteria	4.80999	64.2	-	AKUV01	9	4812	4700	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00672643	GCA_000270805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/805/GCA_000270805.1_ASM27080v1	-	2B-0912-R
Bifidobacterium breve	1685	PRJNA239841	239841	Terrabacteria group	Actinobacteria	2.26378	58.9	-	JGYR01	31	1977	1887	8/18/14	12/4/14	Contig	University of Parma	SAMN02673429	GCA_000741125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/125/GCA_000741125.1_Bifbre	"2,508,549,325,107,960"	LMG 13208
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.21723	36.7	-	LPRL01	5	2332	2174	2/11/16	4/4/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN04305146	GCA_001560125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/125/GCA_001560125.1_GG12_C01_12	-	GG12-C01-12
Vibrio sp. 10N.261.45.E1	1903177	PRJNA328102	328102	Proteobacteria	Gammaproteobacteria	5.7785	44	-	MKKP01	268	5289	5010	1/28/17	4/17/17	Scaffold	Massachusetts Institute of Technology	SAMN05768152	GCA_001974575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/974/575/GCA_001974575.1_ASM197457v1	-	10N.261.45.E1
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.69018	61.7	-	DBIL01	38	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451078	GCA_002296385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/385/GCA_002296385.1_ASM229638v1	28894102	-
Aeromonas hydrophila	644	PRJNA356344	356344	Proteobacteria	Gammaproteobacteria	5.03559	60.9	-	MRDF01	32	4670	4473	1/5/17	4/6/17	Scaffold	HuaZhong Agricultural  University	SAMN06112127	GCA_001937135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/135/GCA_001937135.1_ASM193713v1	-	HZAUAH
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.86508	67.2	-	LOYW01	111	7216	6819	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449306	GCA_001526465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/465/GCA_001526465.1_ASM152646v1	-	MSMB2048
Flavobacterium psychrophilum	96345	PRJEB21067	396411	FCB group	Bacteroidetes/Chlorobi group	2.69431	32.4	-	FYDC01	43	2422	2339	7/29/17	8/7/17	Contig	INRA	SAMEA104126823	GCA_900186805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/805/GCA_900186805.1_NO083_V1	-	NO083
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.76118	47.6	-	MEAO01	76	3488	3305	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320416	GCA_001883605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/605/GCA_001883605.1_ASM188360v1	-	04/2640-8k
Lactobacillus paracasei	1597	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.16059	46.2	-	JVNI01	146	3220	2973	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197468	GCA_001076595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/595/GCA_001076595.1_ASM107659v1	26230489	275_LPAR
Streptococcus oralis	1303	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.96264	41.2	-	JVQE01	30	1953	1847	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197394	GCA_001071715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/715/GCA_001071715.1_ASM107171v1	26230489	201_SPSE
Acinetobacter nosocomialis	106654	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.71473	38.1	-	DFXP01	278	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452939	GCA_002381845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/845/GCA_002381845.1_ASM238184v1	28894102	-
Klebsiella variicola	244366	PRJNA307311	307311	Proteobacteria	Gammaproteobacteria	5.64692	57.3	-	LQMR01	49	5624	5375	4/8/16	2/21/17	Scaffold	Guangxi Normal University	SAMN04378133	GCA_001617965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/965/GCA_001617965.1_ASM161796v1	-	KV321
Pseudoalteromonas sp. TAE56	1938596	PRJNA202435	202435	Proteobacteria	Gammaproteobacteria	4.6007	39	-	AUTN01	163	4217	3831	11/20/13	5/24/17	Scaffold	University of Florence	SAMN02260210	GCA_000497955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/955/GCA_000497955.1_TAE56	28095778	TAE56
Weeksella virosa DSM 16922	865938	PRJNA50581	50581	FCB group	Bacteroidetes/Chlorobi group	2.27295	35.9	chromosome:NC_015144.1/CP002455.1	-	1	2171	2060	2/15/11	4/7/17	Complete Genome	JGI	SAMN00713585	GCA_000189415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/415/GCA_000189415.1_ASM18941v1	21475590	DSM 16922
Acinetobacter pittii	48296	PRJNA281196	281196	Proteobacteria	Gammaproteobacteria	4.01429	38.7	-	LBCP01	147	3949	3671	7/12/16	4/5/17	Contig	Universidade do Estado do Rio de Janeiro	SAMN03485844	GCA_001684275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/684/275/GCA_001684275.1_ASM168427v1	-	FC8876
Citrobacter freundii	546	PRJNA252011	252011	Proteobacteria	Gammaproteobacteria	5.25347	51.5	-	JRTR01	153	5253	4978	10/26/15	4/4/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02872800	GCA_001412875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/875/GCA_001412875.1_ASM141287v1	25501822	RU2 BHI24
Enterobacter hormaechei	158836	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.99039	54.9	-	JZYY01	69	4923	4670	3/19/15	3/25/17	Contig	JCVI	SAMN03283686	GCA_000957105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/105/GCA_000957105.1_ASM95710v1	-	35683
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.28399	55	-	LDBF01	53	5248	5006	5/21/15	4/6/17	Contig	JCVI	SAMN03495941	GCA_001011455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/455/GCA_001011455.1_ASM101145v1	-	GN02329
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98273	64.1	-	FSNI01	12	4935	4784	12/14/16	3/21/17	Contig	SC	SAMEA2070821	GCA_900139545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/545/GCA_900139545.1_10625_5_50	-	135
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.31618	67	-	LOYU01	83	7680	7281	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449304	GCA_001526445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/445/GCA_001526445.1_ASM152644v1	-	MSMB1906
Pseudomonas sp. LAMO17WK12:I4	1259800	PRJNA179455	179455	Proteobacteria	Gammaproteobacteria	5.59363	62.2	-	AZVT01	28	5172	5014	1/3/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02597224	GCA_000514355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/355/GCA_000514355.1_ASM51435v1	-	LAMO17WK12:I4
Streptomyces sp. CNY243	1169161	PRJNA175195	175195	Terrabacteria group	Actinobacteria	8.48198	73.6	-	ARHU01	63	7184	6968	4/22/13	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441361	GCA_000377165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/165/GCA_000377165.1_ASM37716v1	-	CNY243
Acinetobacter sp. BS1	2024618	PRJNA396988	396988	Proteobacteria	Gammaproteobacteria	3.93308	38.8	-	NPMK01	109	3793	3605	8/14/17	8/16/17	Scaffold	Fudan University	SAMN07445345	GCA_002251565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/565/GCA_002251565.1_ASM225156v1	-	BS1
Flavobacterium sp. UBA4120	1946545	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.95585	35.1	-	DFXA01	98	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453218	GCA_002383055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/055/GCA_002383055.1_ASM238305v1	28894102	-
Klebsiella sp. NFIX27	1566166	PRJEB17904	353822	Proteobacteria	Gammaproteobacteria	5.2179	58.2	-	FPKF01	19	5080	4865	11/17/16	2/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159513	GCA_900119605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/605/GCA_900119605.1_IMG-taxon_2603880184_annotated_assembly	-	NFIX27
Bacillus sp. FJAT-27916	1679169	PRJNA289032	289032	Terrabacteria group	Firmicutes	4.15423	43	-	LFZV01	3	4121	3925	7/21/15	4/10/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN03840768	GCA_001183965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/965/GCA_001183965.1_ASM118396v1	-	FJAT-27916
Clostridium sp. IBUN22A	1523155	PRJNA255517	255517	Terrabacteria group	Firmicutes	4.60738	28.7	-	JZWE01	208	4219	3847	4/2/15	4/10/17	Contig	Universidad Nacional de Colombia	SAMN02924069	GCA_000968245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/245/GCA_000968245.1_ClosIBUN22Av1.0	25999575	IBUN22A
Sphingomonas sp. Leaf17	1735683	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	3.204	66.8	-	LMKL01	11	3020	2936	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151584	GCA_001421505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/505/GCA_001421505.1_Leaf17	26633631	Leaf17
Synechococcus sp. TMED205	1986598	PRJNA385857	385857	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.28039	63.1	-	NHJC01	45	1394	1341	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972059	GCA_002170705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/170/705/GCA_002170705.1_ASM217070v1	-	-
Rhodococcus sp. BUPNP1	1432786	PRJNA383111	383111	Terrabacteria group	Actinobacteria	5.55511	68.1	-	NERM01	89	5092	4924	7/6/17	7/8/17	Contig	The University of Burdwan	SAMN06759728	GCA_002215235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/235/GCA_002215235.1_ASM221523v1	-	BUPNP1
Enterobacter sp. BIDMC100	1686399	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.24836	55	-	LETO01	13	5177	4904	6/19/15	4/10/17	Scaffold	Broad Institute	SAMN03280191	GCA_001037845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/845/GCA_001037845.1_Ente_cloa_complex_BIDMC100_V1	-	BIDMC100
Staphylococcus sp. HMSC066G04	1739354	PRJNA300004	300004	Terrabacteria group	Firmicutes	2.53916	31.8	-	LTEL01	79	2494	2385	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477659	GCA_001812315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/315/GCA_001812315.1_ASM181231v1	-	HMSC066G04
Corynebacterium sp. HMSC064H12	1715160	PRJNA296288	296288	Terrabacteria group	Actinobacteria	2.45813	58.9	-	LTIU01	44	2172	2092	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477534	GCA_001809925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/925/GCA_001809925.1_ASM180992v1	-	HMSC064H12
Arthrobacter sp. RIT-PI-e	1681197	PRJNA289426	289426	Terrabacteria group	Actinobacteria	3.45909	69.4	-	LGIU01	104	3241	3017	7/28/15	4/10/17	Contig	Monash University Malaysia	SAMN03853643	GCA_001187915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/915/GCA_001187915.1_ASM118791v1	26586879	RIT-PI-e
Bradyrhizobium sp. STM 3843	551947	PRJEA72431	72431	Proteobacteria	Alphaproteobacteria	8.43479	63.6	-	CAFK01	350	7822	7470	12/14/11	5/18/17	Scaffold	CEA IG Genoscope	SAMEA2272016	GCA_000239815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/815/GCA_000239815.2_ASM23981v2	24704842	STM 3843
Streptococcus sp. HMSC064H09	1739371	PRJNA300021	300021	Terrabacteria group	Firmicutes	2.24356	39.9	-	LTYB01	80	2152	2006	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480035	GCA_001812625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/625/GCA_001812625.1_ASM181262v1	-	HMSC064H09
Mycobacterium sp. H110	1720575	PRJNA294421	294421	Terrabacteria group	Actinobacteria	5.70799	63.9	-	LJYR01	126	5752	5454	11/6/15	4/11/17	Contig	US EPA	SAMN04091153	GCA_001440265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/265/GCA_001440265.1_ASM144026v1	-	H110
Prevotella sp. lc2012	1761886	PRJEB16601	349917	FCB group	Bacteroidetes/Chlorobi group	2.88681	49	-	FNUF01	9	2422	2349	10/22/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487828	GCA_900107065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/065/GCA_900107065.1_IMG-taxon_2606217810_annotated_assembly	-	LC2012
Enterococcus sp. 2F9_DIV0599	1834172	PRJNA313452	313452	Terrabacteria group	Firmicutes	3.60931	42.7	-	NGLN01	15	3423	3226	5/16/17	5/24/17	Scaffold	Broad Institute	SAMN04634070	GCA_002140575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/575/GCA_002140575.1_ASM214057v1	-	2F9_DIV0599
Treponema sp. UBA4245	1947721	PRJNA348753	348753	Spirochaetes	Spirochaetia	2.8088	35.7	-	DGWZ01	285	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455950	GCA_002395445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/445/GCA_002395445.1_ASM239544v1	28894102	-
Methylobacterium sp. ap11	1761799	PRJEB16879	351014	Proteobacteria	Alphaproteobacteria	6.98308	71	-	FOEB01	56	6367	6020	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487843	GCA_900110515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/515/GCA_900110515.1_IMG-taxon_2609459615_annotated_assembly	-	AP11
uncultured Eubacterium sp.	165185	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.0366	37.7	-	FMFW01	96	2924	2860	8/16/16	8/16/16	Scaffold	SC	SAMEA3545372	GCA_900066705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/705/GCA_900066705.1_14207_7_32	-	-
Paenibacillus sp. E194	1458845	PRJNA237296	237296	Terrabacteria group	Firmicutes	6.44974	46.6	-	JMDX01	559	5892	5159	3/2/15	4/10/17	Contig	University of Wisconsin - Madison	SAMN02617790	GCA_000935845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/845/GCA_000935845.1_ASM93584v1	-	E194
Thioalkalivibrio sp. ALJ15	748652	PRJNA183365	183365	Proteobacteria	Gammaproteobacteria	2.85232	65.9	-	ARTU01	13	2746	2625	4/26/13	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02441632	GCA_000383695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/695/GCA_000383695.1_ASM38369v1	-	ALJ15
Bacteroides sp. CAG:770	1262751	PRJEB1001	206804	FCB group	Bacteroidetes/Chlorobi group	2.63477	48	-	CBFR01	103	2127	2085	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138640	GCA_000435075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/075/GCA_000435075.1_MGS770	-	-
Prochlorococcus sp. scB243_496A2	1471478	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.43994	31.4	-	JFMC01	242	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671349	GCA_000634255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/255/GCA_000634255.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. BCW_4332	1903591	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.73913	30.2	-	MJYF01	70	1804	1646	10/4/16	4/13/17	Scaffold	University of California at Davis	SAMN03358054	GCA_001763175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/175/GCA_001763175.1_ASM176317v1	-	BCW_4332
Neisseria sp. HMSC070E12	1739527	PRJNA300178	300178	Proteobacteria	Betaproteobacteria	2.43702	51	-	LTYO01	149	2329	2109	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498689	GCA_001838375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/375/GCA_001838375.1_ASM183837v1	-	HMSC070E12
Rhizobium sp. Leaf306	1736330	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	5.00916	60.3	-	LMNX01	9	4715	4593	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151720	GCA_001423425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/425/GCA_001423425.1_Leaf306	26633631	Leaf306
Mesorhizobium sp. LNHC221B00	1287233	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.75778	62.9	-	AYWR01	69	6638	6140	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359663	GCA_000502935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/935/GCA_000502935.1_Mloti_LNHC221B00	-	LNHC221B00
Microbacterium sp. T32	1776083	PRJNA308036	308036	Terrabacteria group	Actinobacteria	3.53782	70.3	-	LQQP01	78	3410	3287	4/13/16	4/12/17	Contig	University of Malaya	SAMN04384532	GCA_001619615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/615/GCA_001619615.1_ASM161961v1	-	T32
Bacillus velezensis	492670	PRJNA299292	299292	Terrabacteria group	Firmicutes	4.00626	46.3	-	LLZB01	28	3963	3805	12/7/15	3/22/17	Contig	NCAUR-ARS-USDA	SAMN04196680	GCA_001461845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/461/845/GCA_001461845.1_ASM146184v1	-	NRRL B-4257
Gilliamella apicola	1196095	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	3.14386	33.6	-	NARP01	91	2873	2734	5/16/17	5/23/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603517	GCA_002141655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/655/GCA_002141655.1_ASM214165v1	-	A-7-12
Klebsiella michiganensis	1134687	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.03113	55.7	-	JVIH01	685	6086	5457	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197599	GCA_001072835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/835/GCA_001072835.1_ASM107283v1	26230489	409_KOXY
Achromobacter sp. JCM 18799	1295134	PRJDB839	245938	Proteobacteria	Betaproteobacteria	5.49445	64	-	BBDD01	3166	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000542	GCA_001312205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/205/GCA_001312205.1_ASM131220v1	-	JCM 18799
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.55004	50.8	-	MPRX01	85	2518	2410	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016295	GCA_002021275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/275/GCA_002021275.1_ASM202127v1	-	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.74828	57.1	-	FXNU01	93	5824	5412	4/28/17	5/6/17	Scaffold	SC	SAMEA2609414	GCA_900180685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/685/GCA_900180685.1_14936_2_87	-	3189STDY5864941
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79585	32.3	-	FQRC01	15	2794	2620	11/25/16	4/6/17	Contig	SC	SAMEA3449075	GCA_900128155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/155/GCA_900128155.1_17175_3_19	-	3688STDY6125067
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.56933	67.7	-	LPMM01	98	6898	6555	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449672	GCA_001534015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/015/GCA_001534015.1_ASM153401v1	-	MSMB835WGS
Xanthomonas axonopodis pv. manihotis str. UG44	1185713	PRJNA163821	163821	Proteobacteria	Gammaproteobacteria	4.89544	65.1	-	AKFB01	141	4369	4030	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090358	GCA_000266585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/585/GCA_000266585.1_UG44	22699502	UG44
Xanthomonas axonopodis pv. manihotis str. UG45	1185714	PRJNA163823	163823	Proteobacteria	Gammaproteobacteria	4.9864	64.9	-	AKFC01	323	4537	4073	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090359	GCA_000266605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/605/GCA_000266605.1_UG45	22699502	UG45
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.57017	67.7	-	LPMN01	104	6899	6550	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449673	GCA_001534035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/035/GCA_001534035.1_ASM153403v1	-	MSMB836WGS
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.82919	32.3	-	FQRD01	14	2837	2664	11/25/16	4/6/17	Contig	SC	SAMEA3449076	GCA_900128165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/165/GCA_900128165.1_17175_3_20	-	3688STDY6125068
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.90667	56.8	-	FXMW01	116	6095	5625	4/28/17	5/6/17	Scaffold	SC	SAMEA2609358	GCA_900180695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/695/GCA_900180695.1_14893_8_69	-	3189STDY5864734
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.56988	50.9	-	MPRZ01	131	2539	2432	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016297	GCA_002021315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/315/GCA_002021315.1_ASM202131v1	-	-
Achromobacter sp. UBA1170	1945909	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	6.30929	65	-	DBZC01	18	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06457417	GCA_002311015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/015/GCA_002311015.1_ASM231101v1	28894102	-
Klebsiella michiganensis	1134687	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.08947	55.7	-	JVGO01	140	6009	5672	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197644	GCA_001076805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/805/GCA_001076805.1_ASM107680v1	26230489	452_SSON
Gilliamella apicola	1196095	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.94318	34	-	NARQ01	107	2678	2574	5/16/17	5/23/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603518	GCA_002141665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/665/GCA_002141665.1_ASM214166v1	-	A-7-24
Bacillus velezensis	492670	PRJNA300480	300480	Terrabacteria group	Firmicutes	3.92879	46.5	-	LNTG01	2	3889	3678	12/18/15	3/22/17	Contig	Shandong Agricultural  University	SAMN04223542	GCA_001469675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/675/GCA_001469675.1_ASM146967v1	26868409	FKM10
Microbacterium sp. TNHR37B	1775956	PRJNA305084	305084	Terrabacteria group	Actinobacteria	3.51856	69.6	-	LQGV01	4	3269	3174	4/13/16	4/12/17	Contig	Griffith University	SAMN04378105	GCA_001620065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/065/GCA_001620065.1_ASM162006v1	-	TNHR37B
Mesorhizobium sp. LNHC252B00	1287252	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.81584	62	-	AYWO01	190	6781	6086	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359666	GCA_000502955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/955/GCA_000502955.1_Mloti_LNHC252B00	-	LNHC252B00
Rhizobium sp. Leaf383	1736357	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	5.01473	63	-	LMQD01	30	4573	4428	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151747	GCA_001425345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/345/GCA_001425345.1_Leaf383	26633631	Leaf383
Neisseria sp. HMSC071B12	1739546	PRJNA300197	300197	Proteobacteria	Betaproteobacteria	2.35819	51.4	-	LTYN01	117	2288	2117	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498691	GCA_001838405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/405/GCA_001838405.1_ASM183840v1	-	HMSC071B12
Campylobacter sp. BCW_4333	1903592	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.87484	30.1	-	MJYG01	81	1999	1821	10/4/16	4/13/17	Scaffold	University of California at Davis	SAMN03358055	GCA_001763195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/195/GCA_001763195.1_ASM176319v1	-	BCW_4333
Prochlorococcus sp. scB243_497J18	1471485	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.40175	31.3	-	JFMJ01	266	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671356	GCA_000634275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/275/GCA_000634275.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Bacteroides sp. CAG:462	1262740	PRJEB890	206863	FCB group	Bacteroidetes/Chlorobi group	3.56837	53.5	-	CBHU01	156	2876	2834	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138641	GCA_000435095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/095/GCA_000435095.1_MGS462	-	-
Thioalkalivibrio sp. ALE17	1158173	PRJNA188902	188902	Proteobacteria	Gammaproteobacteria	2.77653	67.3	-	AUDT01	27	2721	2573	7/10/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440632	GCA_000425605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/425/605/GCA_000425605.1_ASM42560v1	-	ALE17
Paenibacillus sp. DMB20	1642570	PRJNA281174	281174	Terrabacteria group	Firmicutes	6.64718	50.3	-	LAZU01	58	6292	5111	5/5/15	4/10/17	Contig	Sardar Patel University	SAMN03485799	GCA_000987955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/987/955/GCA_000987955.1_ASM98795v1	26067950	DMB20
uncultured Eubacterium sp.	165185	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.19131	37.8	-	FMGW01	36	2818	2751	8/16/16	8/16/16	Scaffold	SC	SAMEA3545427	GCA_900066975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/975/GCA_900066975.1_14207_7_87	-	-
Methylobacterium sp. 13MFTsu3.1M2	1502776	PRJEB17216	351394	Proteobacteria	Alphaproteobacteria	6.35372	71.2	-	FOMM01	69	5972	5740	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02799627	GCA_900112625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/625/GCA_900112625.1_IMG-taxon_2590828854_annotated_assembly	-	13MFTsu3.1M2
Treponema sp. UBA4232	1947720	PRJNA348753	348753	Spirochaetes	Spirochaetia	2.25049	46.8	-	DGXM01	229	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450916	GCA_002396325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/325/GCA_002396325.1_ASM239632v1	28894102	-
Enterococcus sp. 2G9_DIV0600	1834173	PRJNA313452	313452	Terrabacteria group	Firmicutes	3.57583	42.6	-	NGLL01	4	3423	3240	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634069	GCA_002140615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/615/GCA_002140615.1_ASM214061v1	-	2G9_DIV0600
Prevotella sp. khp7	1761885	PRJEB16801	350935	FCB group	Bacteroidetes/Chlorobi group	3.08008	47.4	-	FOIV01	8	2563	2479	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487827	GCA_900109055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/055/GCA_900109055.1_IMG-taxon_2606217765_annotated_assembly	-	KHP7
Mycobacterium sp. HXVII	1720576	PRJNA294421	294421	Terrabacteria group	Actinobacteria	5.62012	63.9	-	LJYS01	58	5620	5366	11/6/15	4/11/17	Contig	US EPA	SAMN04091154	GCA_001440275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/275/GCA_001440275.1_ASM144027v1	-	HXVII
Streptococcus sp. HMSC070B09	1739374	PRJNA300024	300024	Terrabacteria group	Firmicutes	1.967	35.2	-	LTXY01	30	1988	1904	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480038	GCA_001812695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/695/GCA_001812695.1_ASM181269v1	-	HMSC070B09
Bradyrhizobium sp. LTSPM299	1619233	PRJNA275239	275239	Proteobacteria	Alphaproteobacteria	9.09443	62.8	-	JYMU01	100	8488	8171	3/3/15	4/10/17	Scaffold	University of British Columbia	SAMN03340245	GCA_000938235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/235/GCA_000938235.1_ASM93823v1	-	LTSPM299
Arthrobacter sp. ZBG10	1676590	PRJNA287868	287868	Terrabacteria group	Actinobacteria	4.13381	66.4	-	LFQH01	173	3789	3644	8/5/15	4/10/17	Contig	University of Malaya	SAMN03793178	GCA_001238605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/605/GCA_001238605.1_ASM123860v1	-	ZBG10
Corynebacterium sp. HMSC072A02	1715177	PRJNA296305	296305	Terrabacteria group	Actinobacteria	2.75334	60.9	-	LTIM01	92	2561	2418	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477542	GCA_001810085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/085/GCA_001810085.1_ASM181008v1	-	HMSC072A02
Staphylococcus sp. HMSC077E11	1739359	PRJNA300009	300009	Terrabacteria group	Firmicutes	2.49084	33.8	-	LTEG01	33	2370	2285	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477664	GCA_001812415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/415/GCA_001812415.1_ASM181241v1	-	HMSC077E11
Enterobacter sp. BIDMC109	1686400	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.63783	55.5	-	LETP01	2	4456	4228	6/19/15	4/10/17	Scaffold	Broad Institute	SAMN03280192	GCA_001037885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/885/GCA_001037885.1_Ente_cloa_complex_BIDMC109_V1	-	BIDMC109
Rhodococcus sp. OK302	1882769	PRJNA331842	331842	Terrabacteria group	Actinobacteria	6.79018	61.3	-	NPJZ01	2	6315	5976	8/10/17	8/12/17	Contig	DOE Joint Genome Institute	SAMN05444668	GCA_002245895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/895/GCA_002245895.1_ASM224589v1	-	OK302
Synechococcus sp. TMED155	1986592	PRJNA385857	385857	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.4012	62.2	-	NHHE01	35	1572	1473	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972009	GCA_002171075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/075/GCA_002171075.1_ASM217107v1	-	-
Sphingomonas sp. Leaf20	1735685	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.31332	66.1	-	LMKN01	15	3937	3813	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151585	GCA_001421535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/535/GCA_001421535.1_Leaf20	26633631	Leaf20
Clostridium sp. IBUN125C	1523154	PRJNA255517	255517	Terrabacteria group	Firmicutes	4.59689	28.7	-	JZWF01	71	4130	3972	4/2/15	4/10/17	Contig	Universidad Nacional de Colombia	SAMN02924068	GCA_000968265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/265/GCA_000968265.1_CLOSIBUN125Cv1.0	25999575	IBUN125C
Bacillus sp. FJAT-27231	1679168	PRJNA289031	289031	Terrabacteria group	Firmicutes	4.33221	41.4	-	LFZU01	4	4203	3977	7/21/15	4/10/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN03840767	GCA_001183975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/975/GCA_001183975.1_ASM118397v1	-	FJAT-27231
Flavobacterium sp. UBA4854	1946548	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	5.3239	32.8	-	DHEI01	165	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453583	GCA_002399805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/805/GCA_002399805.1_ASM239980v1	28894102	-
Streptomyces sp. CNT302	1169155	PRJNA177735	177735	Terrabacteria group	Actinobacteria	7.17427	72.5	-	ARIM01	55	6246	5962	4/22/13	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441002	GCA_000377525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/525/GCA_000377525.1_ASM37752v1	-	CNT302
Pseudomonas sp. LAMO17WK12:I2	1259798	PRJNA179453	179453	Proteobacteria	Gammaproteobacteria	6.92894	61	-	AZVU01	34	6441	6233	1/3/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02597225	GCA_000514375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/375/GCA_000514375.1_ASM51437v1	-	LAMO17WK12:I2
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.70204	66.6	-	LPBQ01	81	8107	7695	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449379	GCA_001526755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/755/GCA_001526755.1_ASM152675v1	-	MSMB1831WGS
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98229	64.1	-	FVUJ01	13	4937	4785	3/10/17	3/18/17	Contig	SC	SAMEA2070822	GCA_900139635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/635/GCA_900139635.1_10625_5_53	-	138
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.31405	54.8	-	LDBK01	68	5363	5067	5/21/15	4/6/17	Contig	JCVI	SAMN03495947	GCA_001011475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/475/GCA_001011475.1_ASM101147v1	-	GN02499
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.92824	54.9	-	JZYU01	87	4852	4640	3/19/15	3/25/17	Contig	JCVI	SAMN03283671	GCA_000957135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/135/GCA_000957135.1_ASM95713v1	-	35722
Citrobacter freundii	546	PRJNA252011	252011	Proteobacteria	Gammaproteobacteria	5.33176	51.5	-	JRSU01	151	5353	5082	10/26/15	4/4/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02872765	GCA_001413035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/035/GCA_001413035.1_ASM141303v1	25501822	RU2 LB25
Acinetobacter pittii	48296	PRJNA317609	317609	Proteobacteria	Gammaproteobacteria	4.14347	39	-	LWHP01	2	4042	3705	8/5/16	4/5/17	Contig	Institut Pasteur Korea	SAMN04621895	GCA_001698835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/835/GCA_001698835.1_ASM169883v1	-	IPK_TSA6.1
Helicobacter hepaticus ATCC 51449	235279	PRJNA185	185	Proteobacteria	delta/epsilon subdivisions	1.79915	35.9	chromosome:NC_004917.1/AE017125.1	-	1	1819	1744	6/26/03	4/17/17	Complete Genome	Univ. Wuerzburg	SAMN02604097	GCA_000007905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/905/GCA_000007905.1_ASM790v1	12810954	ATCC 51449
Pseudoalteromonas sp. TB41	985149	PRJNA202402	202402	Proteobacteria	Gammaproteobacteria	4.63261	40.3	-	AUTH01	122	4270	3991	11/20/13	4/17/17	Scaffold	University of Florence	SAMN02260220	GCA_000497975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/975/GCA_000497975.1_TB41	28095778	TB41
Klebsiella variicola	244366	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	6.04513	56.8	-	NGSP01	23	5618	5174	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521850	GCA_002152295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/295/GCA_002152295.1_ASM215229v1	-	BIDMC118
Acinetobacter nosocomialis	106654	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.81772	38.6	-	DFXD01	140	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453437	GCA_002383085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/085/GCA_002383085.1_ASM238308v1	28894102	-
Streptococcus oralis	1303	PRJNA302716	302716	Terrabacteria group	Firmicutes	1.98958	41.4	-	LWCE01	129	1936	1839	4/29/16	4/5/17	Scaffold	TAILORED-Treatment project	SAMN04623586	GCA_001639355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/355/GCA_001639355.1_ASM163935v1	-	CCUG 35754
Lactobacillus paracasei	1597	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.18181	46.1	-	JVDQ01	115	3300	3042	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197720	GCA_001076935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/935/GCA_001076935.1_ASM107693v1	26230489	525_LPAR
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.76082	47.6	-	MEAP01	77	3492	3305	11/18/16	4/5/17	Contig	The University of Queensland	SAMN04320417	GCA_001883615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/615/GCA_001883615.1_ASM188361v1	-	05/0285-1K
Flavobacterium psychrophilum	96345	PRJEB21067	396411	FCB group	Bacteroidetes/Chlorobi group	2.61702	32.4	-	FYDB01	52	2370	2268	7/29/17	8/7/17	Contig	INRA	SAMEA104126824	GCA_900186815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/815/GCA_900186815.1_NO098_V1	-	NO098
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.86083	67.2	-	LOYX01	114	7210	6813	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449307	GCA_001526485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/485/GCA_001526485.1_ASM152648v1	-	MSMB2049
Aeromonas hydrophila	644	PRJNA341407	341407	Proteobacteria	Gammaproteobacteria	4.67383	61.6	-	MTGJ01	132	4321	4117	2/13/17	4/6/17	Scaffold	California Department of Public Health	SAMN05721785	GCA_001999685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/685/GCA_001999685.1_ASM199968v1	-	ATCC 7966
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.34083	64.5	-	DBIG01	35	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451069	GCA_002296595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/595/GCA_002296595.1_ASM229659v1	28894102	-
Vibrio sp. CA-1004	1891186	PRJDB5109	387272	Proteobacteria	Gammaproteobacteria	3.37891	42.1	-	BDGR01	24	3018	2899	5/18/17	5/31/17	Scaffold	"Laboratory of Microbiology, Division of Marine Life Science, Faculty of Fisheries Sciences, Hokkaido University"	SAMD00057777	GCA_002157735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/735/GCA_002157735.1_ASM215773v1	-	CA1004
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.21392	36.7	-	LPRW01	15	2341	2195	2/11/16	4/10/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN04305157	GCA_001560355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/355/GCA_001560355.1_NG05A_C05_01	-	NG05A_C05_01
Bifidobacterium breve DSM 20213 = JCM 1192	518634	PRJDB770	243682	Terrabacteria group	Actinobacteria	2.23281	58.7	-	BBAO01	143	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000422	GCA_001311295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/295/GCA_001311295.1_ASM131129v1	-	JCM 1192
Mycobacterium abscessus 3A-0119-R	1001721	PRJNA65171	65171	Terrabacteria group	Actinobacteria	5.28126	64.1	-	AKUX01	13	5370	5257	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00728494	GCA_000270825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/825/GCA_000270825.1_ASM27082v1	-	3A-0119-R
Lactobacillus salivarius	1624	PRJNA357984	357984	Terrabacteria group	Firmicutes	1.99952	32.5	-	NBEK01	50	1978	1845	4/5/17	4/8/17	Scaffold	University College Cork	SAMN06163263	GCA_002079545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/545/GCA_002079545.1_ASM207954v1	-	gul2
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.3679	57	-	MRXH01	24	4172	3995	3/31/17	4/6/17	Contig	FDA/CFSAN	SAMN06124514	GCA_002075535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/535/GCA_002075535.1_ASM207553v1	-	MOD1-SK1180
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.83474	55.5	-	FKZO01	35	5693	5417	5/19/16	2/25/17	Scaffold	SC	SAMEA2273573	GCA_900083685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/685/GCA_900083685.1_12045_6_41	-	2880STDY5682488
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.88165	55.2	-	JZDC01	100	4832	4563	3/20/15	3/25/17	Scaffold	University of Minnesota	SAMN03333179	GCA_000958825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/825/GCA_000958825.1_ASM95882v1	26438492	MNCRE83
Proteus mirabilis	584	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.04145	38.8	-	JVPB01	199	3729	3589	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197423	GCA_001063035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/035/GCA_001063035.1_ASM106303v1	26230489	232_PMIR
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.38972	32.7	-	CUGP01	58	2350	2236	3/31/15	3/26/17	Contig	SC	SAMEA1035043	GCA_001233205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/205/GCA_001233205.1_7068_7_47	-	131974
Propionibacterium acnes HL074PA1	765076	PRJNA49183	49183	Terrabacteria group	Actinobacteria	2.51091	60.2	-	ADYZ01	58	2545	2390	7/30/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189236	GCA_000144835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/835/GCA_000144835.1_ASM14483v1	-	HL074PA1
Burkholderia sp. BDU5	1385590	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.64823	66.2	-	LOWC01	174	6370	5750	1/21/16	4/11/17	Contig	Northern Arizona University	SAMN03449220	GCA_001522845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/845/GCA_001522845.1_ASM152284v1	-	BDU5
Campylobacter coli 202/04	887299	PRJNA52735	52735	Proteobacteria	delta/epsilon subdivisions	1.67539	31.3	-	AINH01	104	1741	1653	3/16/12	3/15/17	Contig	Cornell University	SAMN02428939	GCA_000253915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/915/GCA_000253915.2_ASM25391v2	-	202/04
Mannheimia haemolytica	75985	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.56914	41.1	-	LQEX01	109	2628	2432	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366545	GCA_001930585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/585/GCA_001930585.1_ASM193058v1	-	2769MH
Lactobacillus plantarum subsp. plantarum NC8	1036177	PRJNA67175	67175	Terrabacteria group	Firmicutes	3.20722	44.6	-	AGRI01	10	3110	2942	2/16/12	3/23/17	Contig	"CMBI Radboud University Medical Centre, Nijmegen"	SAMN02470702	GCA_000247735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/735/GCA_000247735.2_ASM24773v2	22493200	-
Serratia marcescens	615	PRJNA255947	255947	Proteobacteria	Gammaproteobacteria	5.12257	59.9	-	JPWM01	7	4852	4690	8/13/14	3/24/17	Contig	Cork Institute of Technology	SAMN02947226	GCA_000739215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/215/GCA_000739215.1_ASM73921v1	25212627	NGS-ED-1015
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.07752	41.7	-	JJQP01	337	3522	3311	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708958	GCA_000980005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/005/GCA_000980005.1_gtlEnvA5udCFS	25756680	1.H.A.2.8
Yersinia enterocolitica	630	PRJNA359204	359204	Proteobacteria	Gammaproteobacteria	4.71067	47	-	MTHI01	53	4339	4162	2/10/17	3/29/17	Contig	"Istituto Zooprofilattico Sperimentale del Piemonte, Liguria e Valle d'Aosta"	SAMN06187708	GCA_001995305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/305/GCA_001995305.1_ASM199530v1	-	Y4fallowdeer1A
Mycoplasma pneumoniae	2104	PRJNA267612	267612	Terrabacteria group	Tenericutes	0.803078	39.8	-	JTHB01	17	793	695	12/2/15	4/4/17	Scaffold	Capital Institute of Pediatrics	SAMN03142258	GCA_001455695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/695/GCA_001455695.1_ASM145569v1	-	CIP12261
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA296455	296455	Terrabacteria group	Actinobacteria	2.3716	53.5	-	LJXR01	28	2305	2106	12/21/16	4/6/17	Contig	Northumbria University	SAMN04099181	GCA_001913265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/265/GCA_001913265.1_CdipDSM44123	-	DSM 44123
Bordetella bronchiseptica MBORD591	1331219	PRJNA202131	202131	Proteobacteria	Betaproteobacteria	5.15113	68.2	-	JGXG01	271	5032	4700	5/12/14	4/2/17	Contig	JCVI	SAMN02231444	GCA_000690455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/455/GCA_000690455.1_gbb23v01	25908122	MBORD591
Bacillus cytotoxicus NVH 391-98	315749	PRJNA13624	13624	Terrabacteria group	Firmicutes	4.09416	35.8902	chromosome:NC_009674.1/CP000764.1; plasmid pBC9801:NC_009673.1/CP000765.1	-	2	4277	3855	7/17/07	8/28/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598310	GCA_000017425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/425/GCA_000017425.1_ASM1742v1	17434157	NVH 391-98
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31139	57.2358	chromosome 1:NZ_CP018510.1/CP018510.1; chromosome 2:NZ_CP018511.1/CP018511.1	-	2	3373	3141	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932958	GCA_002191995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/995/GCA_002191995.1_ASM219199v1	28388689	BwIM_SYR_01
Lactobacillus rhamnosus	47715	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.0486	46.6	-	JUMP01	212	3067	2854	7/10/15	4/3/17	Contig	University of Washington	SAMN03198163	GCA_001068195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/195/GCA_001068195.1_ASM106819v1	26230489	943_LRHA
Pasteurella multocida	747	PRJNA251431	251431	Proteobacteria	Gammaproteobacteria	2.3038	40.4	-	JNOK01	33	2199	2090	7/18/14	4/2/17	Scaffold	University of Minnesota	SAMN02839402	GCA_000731735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/735/GCA_000731735.1_ASM73173v1	25103770	2213
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12553	41.2	-	CVZC01	79	2054	1876	6/24/15	3/26/17	Contig	SC	SAMEA1032805	GCA_001175885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/885/GCA_001175885.1_6903_2_13	-	EQUI0062
Stenotrophomonas maltophilia	40324	PRJNA285410	285410	Proteobacteria	Gammaproteobacteria	4.43125	67	-	LDVS01	239	4021	3904	8/31/15	3/26/17	Contig	University of Queensland	SAMN03753637	GCA_001276385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/385/GCA_001276385.1_ASM127638v1	-	B5
Chlamydia psittaci UGA	1055521	PRJNA217087	217087	PVC group	Chlamydiae	1.1725	38.9607	plasmid unnamed:NZ_CM003780.1/CM003780.1	AWXQ01	7	1043	991	2/17/16	4/4/17	Scaffold	cdc	SAMN04497623	GCA_001563055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/055/GCA_001563055.1_ASM156305v1	25887617	UGA
Enterococcus faecium R499	1134838	PRJNA82065	82065	Terrabacteria group	Firmicutes	2.84678	37.7	-	AMAF01	202	2921	2784	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299513	GCA_000294875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/875/GCA_000294875.2_ASM29487v2	-	R499
Neisseria gonorrhoeae MU_NG21	1351812	PRJNA209650	209650	Proteobacteria	Betaproteobacteria	2.13686	52.4	-	ATRJ01	344	2427	2174	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02338837	GCA_001026115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/115/GCA_001026115.1_ASM102611v1	-	MU_NG21
Streptococcus mutans TCI-243	1074170	PRJNA72083	72083	Terrabacteria group	Firmicutes	1.9147	36.8	-	AGLY01	66	1921	1828	10/6/11	3/22/17	Contig	JCVI	SAMN02436519	GCA_000229665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/665/GCA_000229665.2_SMUT6-NEX_78-243	-	TCI-243
Enterococcus faecalis ARO1/DG	565651	PRJNA32929	32929	Terrabacteria group	Firmicutes	2.84994	37.7	-	ACAK01	13	2868	2749	6/12/09	3/22/17	Scaffold	Broad Institute	SAMN02595256	GCA_000157275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/275/GCA_000157275.1_ASM15727v1	-	AR01/DG
Lactococcus lactis subsp. cremoris A76	1104322	PRJNA74685	74685	Terrabacteria group	Firmicutes	2.5771	35.8771	chromosome:NC_017492.1/CP003132.1; plasmid pQA504:NC_017497.1/CP003136.1; plasmid pQA518:NC_017495.1/CP003135.1; plasmid pQA549:NC_017493.1/CP003134.1; plasmid pQA554:NC_017496.1/CP003133.1	-	5	2683	2320	12/1/11	3/30/17	Complete Genome	MICALIS INRA	SAMN02603598	GCA_000236475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/475/GCA_000236475.1_ASM23647v1	-	A76
Clostridium botulinum CDC66177	1221327	PRJNA172445	172445	Terrabacteria group	Firmicutes	3.85244	27.2	-	ALYJ01	119	3567	3339	11/2/12	3/23/17	Contig	Centers for Disease Control and Prevention	SAMN02952937	GCA_000309805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/805/GCA_000309805.1_ASM30980v1	23113872	CDC66177
Lactococcus lactis subsp. cremoris SK11	272622	PRJNA401	401	Terrabacteria group	Firmicutes	2.59835	35.8242	chromosome:NC_008527.1/CP000425.1; plasmid 1:NC_008503.1/CP000426.1; plasmid 2:NC_008504.1/CP000427.1; plasmid 3:NC_008505.1/CP000428.1; plasmid 4:NC_008506.1/CP000429.1; plasmid 5:NC_008507.1/CP000430.1	-	6	2702	2358	10/13/06	3/30/17	Complete Genome	"US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc."	SAMN02598527	GCA_000014545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/545/GCA_000014545.1_ASM1454v1	17030793	SK11
Lactococcus lactis subsp. cremoris	1359	PRJNA320692	320692	Terrabacteria group	Firmicutes	2.63911	35.8019	chromosome:NZ_CP015901.1/CP015901.1; plasmid pJM3A:NZ_CP016737.1/CP016737.1; plasmid pJM3B:NZ_CP016738.1/CP016738.1; plasmid pJM3C:NZ_CP016739.1/CP016739.1; plasmid pJM3D:NZ_CP016740.1/CP016740.1; plasmid pJM3E:NZ_CP016741.1/CP016741.1	-	6	2758	2424	4/4/17	4/6/17	Complete Genome	University College Cork	SAMN04955245	GCA_002078935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/935/GCA_002078935.1_ASM207893v1	28356072	JM3
Vibrio parahaemolyticus	670	PRJNA275536	275536	Proteobacteria	Gammaproteobacteria	5.26893	45.2	-	JYJR01	128	5039	4781	5/12/15	3/17/17	Scaffold	Health Canada	SAMN03349608	GCA_001006125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/125/GCA_001006125.1_ASM100612v1	-	Oct-44
Streptococcus mitis	28037	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.90805	40.3	-	NCVH01	33	1963	1835	4/18/17	4/21/17	Scaffold	Slagelse Hospital	SAMN06705601	GCA_002096855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/855/GCA_002096855.1_ASM209685v1	27325438	RH_17439_08
Oenococcus oeni S15	1428439	PRJNA229729	229729	Terrabacteria group	Firmicutes	1.74073	37.8	-	AZLJ01	37	1766	1625	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02904292	GCA_000762205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/205/GCA_000762205.1_Oeoe_S15_1.0	24901216	S15
Xanthomonas oryzae pv. oryzae	64187	PRJNA269416	269416	Proteobacteria	Gammaproteobacteria	4.25115	63.9	-	JXEM01	418	4250	3410	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252521	GCA_001927695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/695/GCA_001927695.1_ASM192769v1	-	DXO-044
Campylobacter fetus subsp. fetus	32019	PRJEB8721	292173	Proteobacteria	delta/epsilon subdivisions	1.88773	34	-	FAVG01	16	2033	1925	11/29/15	4/4/17	Scaffold	SC	SAMEA3310294	GCA_001486845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/486/845/GCA_001486845.1_17150_1_81	-	006A-0170
Xanthomonas citri subsp. citri	611301	PRJEB7153	306110	Proteobacteria	Gammaproteobacteria	5.28681	64.7	-	CCWE01	49	5015	4936	12/16/15	12/16/15	Scaffold	Genoscope CEA	SAMEA2752277	GCA_001492055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/055/GCA_001492055.1_ASX_AA_PRJEB7153_v1	-	-
Brucella abortus 600/64	1169206	PRJNA173532	173532	Proteobacteria	Alphaproteobacteria	3.31574	57.2	-	AQIT01	5	3412	3167	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00839729	GCA_000369965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/965/GCA_000369965.1_Bruc_abor_600_64_V1	-	600/64
Francisella tularensis	263	PRJNA244555	244555	Proteobacteria	Gammaproteobacteria	1.81846	32.3	-	JOOS01	1	1849	1562	8/19/14	4/2/17	Scaffold	Los Alamos National Laboratory	SAMN02870009	GCA_000742095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/095/GCA_000742095.1_ASM74209v1	25291764	Larsen
Shigella boydii	621	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.28358	50.6	-	NQDX01	152	5500	5091	8/11/17	8/15/17	Contig	JCVI	SAMN07450708	GCA_002249045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/045/GCA_002249045.1_ASM224904v1	-	ECPSTH05
Clostridioides difficile	1496	PRJNA238404	238404	Terrabacteria group	Firmicutes	4.26855	28.7	-	JFAF01	102	4045	3884	4/16/14	3/16/17	Scaffold	UNIVERSITY OF CONNECTICUT	SAMN02644972	GCA_000632735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/735/GCA_000632735.1_P1	25440554	SG12
Vibrio cholerae HE-09	991998	PRJNA64003	64003	Proteobacteria	Gammaproteobacteria	3.82613	47.5	-	AFOP01	223	3613	3404	7/26/11	3/22/17	Scaffold	Institute for Genome Sciences	SAMN02435807	GCA_000221405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/405/GCA_000221405.1_ASM22140v1	-	HE-09
Ralstonia solanacearum	305	PRJNA269729	269729	Proteobacteria	Betaproteobacteria	5.62164	67.1	-	JXLK01	298	5091	4692	5/16/16	4/5/17	Contig	University of Florida MREC	SAMN03256359	GCA_001644865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/865/GCA_001644865.1_ASM164486v1	-	P781
Bacillus thuringiensis serovar pulsiensis BGSC 4CC1	527028	PRJNA29731	29731	Terrabacteria group	Firmicutes	6.0026	34.9	chromosome:NZ_CM000757.1/CM000757.1	ACNJ01	1	12524	11953	4/30/09	6/19/17	Chromosome	Naval Medical Research Center	SAMN00727674	GCA_000161695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/695/GCA_000161695.1_ASM16169v1	22645259	BGSC 4CC1
Burkholderia mallei	13373	PRJNA244022	244022	Proteobacteria	Betaproteobacteria	5.45658	68.5	-	JPGF01	296	5992	5348	9/4/15	4/4/17	Contig	Los Alamos National Laboratory	SAMN02797575	GCA_001278925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/925/GCA_001278925.1_BFZ	26744368	Turkey4
Capnocytophaga sp. H4358	1945658	PRJNA369395	369395	FCB group	Bacteroidetes/Chlorobi group	2.63319	35.8	chromosome:NZ_CP022380.1/CP022380.1	-	1	2227	2126	9/14/17	9/16/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06289154	GCA_002302515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/515/GCA_002302515.1_ASM230251v1	-	H4358
Elizabethkingia anophelis	1117645	PRJNA231221	231221	FCB group	Bacteroidetes/Chlorobi group	4.07399	35.8	chromosome:NZ_CP023010.1/CP023010.1	-	1	3738	3529	8/30/17	9/1/17	Complete Genome	US Food and Drug Administration 	SAMN04875535	GCA_002277995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/995/GCA_002277995.1_ASM227799v1	-	FDAARGOS_198
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.30275	67	-	MUQU01	210	7889	7409	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001831	GCA_001991355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/355/GCA_001991355.1_ASM199135v1	-	VC10178
Lactobacillus reuteri	1598	PRJNA380292	380292	Terrabacteria group	Firmicutes	2.15294	38.8	-	NBBF01	179	2261	1996	4/27/17	5/3/17	Scaffold	University of Alberta	SAMN06640223	GCA_002112805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/805/GCA_002112805.1_ASM211280v1	28389535	MM34-4A
Bacteroides fragilis str. 3719 A10	1339307	PRJNA206150	206150	FCB group	Bacteroidetes/Chlorobi group	5.24522	43.3	-	JGDP01	117	4672	4302	3/20/14	4/18/17	Contig	IGS	SAMN02314524	GCA_000598845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/845/GCA_000598845.1_ASM59884v1	-	3719 A10
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.79147	50.7	-	CXNJ01	409	5425	4616	7/16/15	2/24/17	Contig	SC	SAMEA2055700	GCA_001257955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/955/GCA_001257955.1_9870_6_7	-	143102
Streptococcus agalactiae	1311	PRJNA293392	293392	Terrabacteria group	Firmicutes	2.22768	35.8	chromosome:NZ_CP021862.1/CP021862.1	-	1	2330	2158	6/16/17	6/21/17	Complete Genome	Singapore Streptococcus agalactiae working group	SAMN05384056	GCA_002197205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/205/GCA_002197205.1_ASM219720v1	28475781	CUGBS591
Bacillus licheniformis F1-1	1433290	PRJNA230652	230652	Terrabacteria group	Firmicutes	4.11235	46.3	-	AZSL01	30	4249	4093	3/28/14	4/18/17	Scaffold	The University of Queensland	SAMN02437138	GCA_000603965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/965/GCA_000603965.1_Bacillus_licheniformis_strain_F1-1	24657871	F1-1
Vibrio vulnificus	672	PRJNA281283	281283	Proteobacteria	Gammaproteobacteria	5.08945	46.6	-	MVKU01	190	4693	4453	3/28/17	3/30/17	Contig	"Technische Universitaet Dresden, Medical Faculty 'Carl Gustav Carus'"	SAMN03486932	GCA_002073185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/185/GCA_002073185.1_ASM207318v1	-	VN-0092
Pseudomonas syringae pv. actinidiae ICMP 18800	1104681	PRJNA74969	74969	Proteobacteria	Gammaproteobacteria	6.22859	58.5	-	ANJD01	463	6004	5483	3/5/13	5/19/17	Contig	University of Otago	SAMN02471922	GCA_000344375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/375/GCA_000344375.1_ICMP18800PSA1.0	23555547	ICMP 18800
Streptococcus suis 89-1591	1214151	PRJNA171430	171430	Terrabacteria group	Firmicutes	2.14688	41.1	-	ALLI01	128	2224	2044	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469524	GCA_000440595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/595/GCA_000440595.1_version1	-	89-1591
Streptococcus agalactiae MC623	1333568	PRJNA203063	203063	Terrabacteria group	Firmicutes	2.03704	35.1	-	ATOX01	36	2077	1995	7/3/13	3/18/17	Scaffold	The Genome Institute	SAMN02436898	GCA_000419175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/175/GCA_000419175.2_S_agalactiaeMC623-1.0	-	MC623
Streptococcus agalactiae	1311	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.21854	35.8	chromosome:NZ_CP020449.1/CP020449.1	-	1	2295	2038	3/29/17	8/11/17	Complete Genome	US Food and Drug Administration 	SAMN04875580	GCA_002073695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/695/GCA_002073695.1_ASM207369v1	-	FDAARGOS_254
Streptococcus agalactiae	1311	PRJNA374480	374480	Terrabacteria group	Firmicutes	2.19878	35.8	chromosome:NZ_CP019978.1/CP019978.1	-	1	2292	2110	3/13/17	3/15/17	Complete Genome	"Ruijin Hospital, Shanghai Jiaotong University School of Medicine"	SAMN06329441	GCA_002025025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/025/GCA_002025025.1_ASM202502v1	-	Sag37
Bifidobacterium longum subsp. longum	1679	PRJDB4597	325619	Terrabacteria group	Actinobacteria	2.48387	60	-	BCYK01	49	2172	1963	6/10/16	4/5/17	Contig	Yakult Central Institute	SAMD00047621	GCA_001686205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/205/GCA_001686205.1_ASM168620v1	27340092	LO-C29
Shigella flexneri Y	424720	PRJNA279143	279143	Proteobacteria	Gammaproteobacteria	4.62566	50.5	-	LAJV01	471	5190	4365	7/21/15	3/5/17	Contig	U.S. Food and Drug Administration	SAMN03438040	GCA_001184145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/145/GCA_001184145.1_ASM118414v1	-	BS1060
Bacillus anthracis	1392	PRJNA243516	243516	Terrabacteria group	Firmicutes	5.28699	35.2806	chromosome:NZ_CM002879.1/CM002879.1; plasmid pXO2:NZ_CM002880.1/CM002880.1	JNOD01	2	11555	11089	8/20/14	4/10/17	Chromosome	Los Alamos National Laboratory	SAMN02732407	GCA_000742315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/315/GCA_000742315.1_ASM74231v1	25301645	Smith 1013
Pseudomonas putida	303	PRJNA318787	318787	Proteobacteria	Gammaproteobacteria	5.95985	63	-	MCBH01	59	5459	5260	8/8/16	4/5/17	Contig	University of Pittsburgh	SAMN04867695	GCA_001700695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/695/GCA_001700695.1_ASM170069v1	-	PSP2
Leptospira interrogans str. Brem 329	1193039	PRJNA167229	167229	Spirochaetes	Spirochaetia	4.7549	35	-	AKXA02	53	4342	3899	10/17/12	5/18/17	Contig	J. Craig Venter Institute	SAMN02436488	GCA_000306215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/215/GCA_000306215.2_gls454057v2.0	-	Brem 329
Bartonella sp. A1379B	1933910	PRJNA360985	360985	Proteobacteria	Alphaproteobacteria	1.54198	35.8	chromosome:NZ_CP019780.1/CP019780.1	-	1	1332	1218	3/7/17	3/10/17	Complete Genome	University of Basel	SAMN06213872	GCA_002022485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/485/GCA_002022485.1_ASM202248v1	-	A1379B
Streptococcus agalactiae	1311	PRJNA328400	328400	Terrabacteria group	Firmicutes	2.21257	35.8	chromosome:NZ_CP016501.1/CP016501.1	-	1	2262	2067	9/16/16	3/21/17	Complete Genome	Chinese Academy of Fishery Sciences	SAMN05370985	GCA_001729925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/925/GCA_001729925.1_ASM172992v1	-	WC1535
Campylobacter iguaniorum	1244531	PRJNA284978	284978	Proteobacteria	delta/epsilon subdivisions	1.54409	35.8	chromosome:NZ_CP015577.1/CP015577.1	-	1	1634	1540	5/16/16	4/12/17	Complete Genome	"USDA, ARS, WRRC"	SAMN03737975	GCA_001643995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/995/GCA_001643995.1_ASM164399v1	27365359	RM11343
Streptococcus pneumoniae PNI0076	1159093	PRJNA89189	89189	Terrabacteria group	Firmicutes	2.07988	39.7	-	AKRG01	154	2340	2050	1/29/13	3/9/17	Scaffold	Washington University	SAMN02299529	GCA_000334755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/755/GCA_000334755.1_ASM33475v1	-	PNI0076
Sulfolobus solfataricus	2287	PRJEB13308	317814	TACK group	Crenarchaeota	3.03402	35.8	chromosome I:NZ_LT549890.1/LT549890.1	-	1	3254	2944	4/11/16	4/5/17	Complete Genome	Institute of Biology	SAMEA3920617	GCA_900079115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/115/GCA_900079115.1_SSOP1	-	P1
Elizabethkingia anophelis	1117645	PRJNA315668	315668	FCB group	Bacteroidetes/Chlorobi group	3.93122	35.8	chromosome:NZ_CP015066.2/CP015066.2	-	1	3579	3472	4/11/16	4/5/17	Complete Genome	Bacterial Special Pathogens Branch (CDC)	SAMN04590540	GCA_001618465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/465/GCA_001618465.2_ASM161846v2	27313304	CSID_3015183684
Haemophilus influenzae	727	PRJNA285217	285217	Proteobacteria	Gammaproteobacteria	1.84722	38	-	LFDL01	18	1850	1715	7/21/15	3/26/17	Contig	University of Oklahoma Health Sciences Center	SAMN03702704	GCA_001184595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/595/GCA_001184595.1_ASM118459v1	26390432	HI1426
Mycobacterium bovis	1765	PRJNA214551	214551	Terrabacteria group	Actinobacteria	4.32116	65.6	-	NBZZ01	29	4209	4010	5/18/17	5/24/17	Contig	South American Mycobacterium bovis WGS	SAMN06697553	GCA_002148975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/975/GCA_002148975.1_ASM214897v1	-	M1009
Mycobacterium avium MAV_120809_2495	1335420	PRJNA203575	203575	Terrabacteria group	Actinobacteria	5.71214	68.9	-	JAOO01	97	5420	4917	1/27/14	4/3/17	Contig	Institute for Genome Sciences	SAMN02641623	GCA_000523995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/995/GCA_000523995.1_ASM52399v1	-	MAV_120809_2495
Clostridium perfringens	1502	PRJNA327458	327458	Terrabacteria group	Firmicutes	3.66905	28	-	MASF01	58	3406	3217	1/12/17	4/6/17	Contig	"Ontario Veterinary College, University of Guelph"	SAMN05323907	GCA_001949805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/805/GCA_001949805.1_ASM194980v1	28062388	JFP986
Xanthomonas campestris pv. vitiscarnosae	487900	PRJNA298601	298601	Proteobacteria	Gammaproteobacteria	5.06226	64.7	-	LOKI01	105	4570	4180	3/6/17	3/9/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN04145194	GCA_002019305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/305/GCA_002019305.1_ASM201930v1	-	LMG939
Lactococcus lactis subsp. lactis	1360	PRJNA294255	294255	Terrabacteria group	Firmicutes	2.54729	35.3	-	LKLC01	171	2595	2373	12/4/15	4/4/17	Contig	Radboudumc	SAMN04018792	GCA_001456385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/385/GCA_001456385.1_ASM145638v1	-	ATCC 19435
Bacillus cereus R309803	526968	PRJNA29647	29647	Terrabacteria group	Firmicutes	5.58625	35.4	chromosome:NZ_CM000720.1/CM000720.1	ACLY01	1	11626	11172	4/30/09	6/15/17	Chromosome	Naval Medical Research Center	SAMN00726683	GCA_000160995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/995/GCA_000160995.1_ASM16099v1	22645259	R309803
Staphylococcus epidermidis NIHLM020	979213	PRJNA62375	62375	Terrabacteria group	Firmicutes	2.37686	32.1	-	AKGW01	64	2358	2141	7/9/12	3/23/17	Contig	NISC - NIH Intramural Sequencing Center	SAMN00993291	GCA_000276265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/265/GCA_000276265.1_ASM27626v1	-	NIHLM020
Elizabethkingia anophelis	1117645	PRJNA315668	315668	FCB group	Bacteroidetes/Chlorobi group	3.93122	35.8	chromosome:NZ_CP015068.2/CP015068.2	-	1	3578	3471	4/11/16	4/5/17	Complete Genome	Bacterial Special Pathogens Branch (CDC)	SAMN04567745	GCA_001618545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/545/GCA_001618545.2_ASM161854v2	27313304	CSID_3015183681
Yersinia pestis subsp. microtus bv. Caucasica	385966	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.5603	47.6	-	LIYQ01	207	4308	3993	9/21/15	3/26/17	Scaffold	SRCAMB	SAMN03839876	GCA_001294815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/815/GCA_001294815.1_ASM129481v1	26634751	SCPM-O-B-7761
Pseudomonas fluorescens	294	PRJNA269735	269735	Proteobacteria	Gammaproteobacteria	6.04797	62.4	-	JXNZ01	524	5638	5208	2/12/15	4/3/17	Contig	Unversidad Michoacana de San Nicolas de Hidalgo	SAMN03256364	GCA_000836415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/836/415/GCA_000836415.1_ASM83641v1	26767092	UM270
Elizabethkingia anophelis	1117645	PRJNA315668	315668	FCB group	Bacteroidetes/Chlorobi group	3.93122	35.8	chromosome:NZ_CP014805.2/CP014805.2	-	1	3578	3473	3/23/16	4/5/17	Complete Genome	Bacterial Special Pathogens Branch (CDC)	SAMN04567744	GCA_001596175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/175/GCA_001596175.2_ASM159617v2	27313304	CSID_3015183678
Staphylococcus schleiferi	1295	PRJNA270103	270103	Terrabacteria group	Firmicutes	2.58293	35.8	chromosome:NZ_CP010309.1/CP010309.1	-	1	2485	2333	7/30/15	4/10/17	Complete Genome	Center for Host Microbe Interactions	SAMN03262954	GCA_001188915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/915/GCA_001188915.1_ASM118891v1	26358596	2317-03
Streptococcus agalactiae	1311	PRJNA244773	244773	Terrabacteria group	Firmicutes	2.23148	35.8	chromosome:NZ_CP007572.1/CP007572.1	-	1	2306	2119	8/21/14	3/16/17	Complete Genome	Centers for Disease Control and Prevention	SAMN05771129	GCA_000831105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/105/GCA_000831105.1_ASM83110v1	25053786	GBS6
Acholeplasma brassicae	61635	PRJEB1741	222672	Terrabacteria group	Tenericutes	1.87779	35.8	chromosome:NC_022549.1/FO681348.1	-	1	1756	1684	10/11/13	4/17/17	Complete Genome	MPIMG	SAMEA4532333	GCA_000967915.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/915/GCA_000967915.1_ASM96791v1	24158107	O502
Methanobacterium lacus	877455	PRJNA53495	53495	Euryarchaeota	Methanobacteria	2.58375	35.8	chromosome:NC_015216.1/CP002551.1	-	1	2533	2451	3/7/11	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN02232037	GCA_000191585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/585/GCA_000191585.1_ASM19158v1	24449792	AL-21
Sulfolobus solfataricus 98/2	555311	PRJNA30989	30989	TACK group	Crenarchaeota	2.66897	35.8	chromosome:NC_017274.1/CP001800.1	-	1	2924	2661	10/20/09	3/30/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00120218	GCA_000024745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/745/GCA_000024745.1_ASM2474v1	-	98/2
Pseudomonas fluorescens	294	PRJNA271841	271841	Proteobacteria	Gammaproteobacteria	6.35818	59.8	-	JXCQ01	143	5776	5589	2/17/15	4/3/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03278127	GCA_000876155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/155/GCA_000876155.1_ASM87615v1	25814594	Feb-79
Yersinia pestis subsp. microtus bv. Caucasica	385966	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.51057	47.6	-	LIYP01	190	4267	3907	9/21/15	3/26/17	Scaffold	SRCAMB	SAMN03839871	GCA_001294825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/825/GCA_001294825.1_ASM129482v1	26634751	SCPM-O-B-6904
Sulfolobus solfataricus P2	273057	PRJNA108	108	TACK group	Crenarchaeota	2.99225	35.8	chromosome:NC_002754.1/AE006641.1	-	1	3213	2829	10/3/01	9/18/17	Complete Genome	European/Canadian Consortium	SAMN02603227	GCA_000007005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/005/GCA_000007005.1_ASM700v1	-	P2
Staphylococcus epidermidis NIHLM021	979212	PRJNA62373	62373	Terrabacteria group	Firmicutes	2.49532	32.1	-	AKGV01	72	2502	2295	7/9/12	3/23/17	Contig	NISC - NIH Intramural Sequencing Center	SAMN00993238	GCA_000276285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/285/GCA_000276285.1_ASM27628v1	-	NIHLM021
Bacillus cereus ATCC 4342	526977	PRJNA29665	29665	Terrabacteria group	Firmicutes	5.2348	35.2	chromosome:NZ_CM000721.1/CM000721.1	ACLZ01	1	11031	10604	4/30/09	6/15/17	Chromosome	Naval Medical Research Center	SAMN00717283	GCA_000161015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/015/GCA_000161015.1_ASM16101v1	22645259	ATCC 4342
Lactococcus lactis subsp. lactis	1360	PRJNA294255	294255	Terrabacteria group	Firmicutes	2.37566	34.9	-	LKLD01	46	2329	2213	12/4/15	4/4/17	Contig	Radboudumc	SAMN04023369	GCA_001456455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/455/GCA_001456455.1_ASM145645v1	-	E34
Xanthomonas campestris pv. vitiswoodrowii	487902	PRJNA298602	298602	Proteobacteria	Gammaproteobacteria	5.03104	64.6	-	LOKG01	102	4514	3977	3/6/17	4/11/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN04145195	GCA_002019335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/335/GCA_002019335.1_ASM201933v1	-	LMG954
Clostridium perfringens	1502	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.25438	28	-	NFKH01	71	2963	2790	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473648	GCA_002160285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/285/GCA_002160285.1_ASM216028v1	-	An185
Mycobacterium avium subsp. hominissuis A5	1160711	PRJNA88487	88487	Terrabacteria group	Actinobacteria	4.87051	69.4	-	AUZQ01	50	4604	4430	6/2/14	4/2/17	Contig	Oregon State University	SAMN02756836	GCA_000696715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/715/GCA_000696715.1_Maq_reference_guided_assembly	-	A5
Mycobacterium bovis	1765	PRJNA214551	214551	Terrabacteria group	Actinobacteria	4.32116	65.6	-	NCTD01	28	4210	4011	5/18/17	5/24/17	Contig	South American Mycobacterium bovis WGS	SAMN06697554	GCA_002149005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/149/005/GCA_002149005.1_ASM214900v1	-	M1010
Haemophilus influenzae	727	PRJNA285216	285216	Proteobacteria	Gammaproteobacteria	1.82913	37.9	-	LFDK01	15	1806	1663	7/21/15	3/26/17	Contig	University of Oklahoma Health Sciences Center	SAMN03702703	GCA_001184615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/615/GCA_001184615.1_ASM118461v1	26390432	HI1417
Campylobacter iguaniorum	1244531	PRJNA177184	177184	Proteobacteria	delta/epsilon subdivisions	1.75464	35.7922	chromosome:NZ_CP009043.1/CP009043.1; plasmid pCIG1485E:NZ_CP009044.1/CP009044.1	-	2	1830	1756	7/30/14	4/9/17	Complete Genome	Utrecht University	SAMN02929694	GCA_000736415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/415/GCA_000736415.1_ASM73641v1	-	1485E
Staphylococcus simulans	1286	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.87197	35.7696	chromosome:CP023497.1; plasmid unnamed:CP023496.1	-	2	2777	2598	9/28/17	9/28/17	Complete Genome	US Food and Drug Administration 	SAMN07312427	GCA_002386185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/185/GCA_002386185.1_ASM238618v1	-	FDAARGOS_383
Streptococcus pneumoniae PNI0153	1159094	PRJNA89191	89191	Terrabacteria group	Firmicutes	2.0988	39.7	-	AKRH01	5	2332	2067	1/29/13	3/9/17	Scaffold	Washington University	SAMN02299530	GCA_000334775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/775/GCA_000334775.1_ASM33477v1	-	PNI0153
Lactococcus lactis subsp. cremoris UC509.9	1111678	PRJNA76597	76597	Terrabacteria group	Firmicutes	2.45735	35.76	chromosome:NC_019435.1/CP003157.1; plasmid pCIS1:NC_019438.1/CP003165.1; plasmid pCIS2:NC_019434.1/CP003164.1; plasmid pCIS3:NC_019433.1/CP003163.1; plasmid pCIS4:NC_019437.1/CP003162.1; plasmid pCIS5:NC_019432.1/CP003161.1; plasmid pCIS6:NC_019436.1/CP003160.1; plasmid pCIS7:NC_019431.1/CP003159.1; plasmid pCIS8:NC_019430.1/CP003158.1	-	9	2511	2153	11/13/12	3/31/17	Complete Genome	University College Cork	SAMN02604113	GCA_000312685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/685/GCA_000312685.1_ASM31268v1	23405300	UC509.9
Lactococcus lactis subsp. cremoris	1359	PRJNA320689	320689	Terrabacteria group	Firmicutes	2.75219	35.7597	chromosome:NZ_CP015899.1/CP015899.1; plasmid pJM1A:NZ_CP016747.1/CP016747.1; plasmid pJM1B:NZ_CP016748.1/CP016748.1; plasmid pJM1C:NZ_CP016749.1/CP016749.1; plasmid pJM1D:NZ_CP016750.1/CP016750.1; plasmid pJM1E:NZ_CP016751.1/CP016751.1; plasmid pJM1F:NZ_CP016752.1/CP016752.1; plasmid pMPJM1:NZ_CP016746.1/CP016746.1	-	8	2838	2473	4/4/17	4/6/17	Complete Genome	University College Cork	SAMN04955031	GCA_002078895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/895/GCA_002078895.1_ASM207889v1	28356072	JM1
Lactococcus lactis subsp. cremoris	1359	PRJNA320719	320719	Terrabacteria group	Firmicutes	2.39039	35.7551	chromosome:NZ_CP015907.1/CP015907.1; plasmid pUC109A:NZ_CP016707.1/CP016707.1; plasmid pUC109B:NZ_CP016708.1/CP016708.1; plasmid pUC109C:NZ_CP016709.1/CP016709.1; plasmid pUC109D:NZ_CP016710.1/CP016710.1; plasmid pUC109E:NZ_CP016711.1/CP016711.1; plasmid pUC109F:NZ_CP016712.1/CP016712.1	-	7	2460	2133	4/4/17	4/5/17	Complete Genome	University College Cork	SAMN04956304	GCA_002078765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/765/GCA_002078765.1_ASM207876v1	28356072	UC109
Leptospira interrogans serovar Icterohaemorrhagiae str. Verdun LP	1193019	PRJNA167244	167244	Spirochaetes	Spirochaetia	4.60983	35	-	AKWP02	31	4106	3759	10/17/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436410	GCA_000306295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/295/GCA_000306295.2_gls454117v2.0	-	Verdun LP
Pseudomonas putida	303	PRJNA318811	318811	Proteobacteria	Gammaproteobacteria	5.9641	63	-	MCBJ01	55	5450	5264	8/8/16	4/5/17	Contig	University of Pittsburgh	SAMN04867918	GCA_001700705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/705/GCA_001700705.1_ASM170070v1	-	PSP4
Bacillus anthracis str. CNEVA-9066	280354	PRJNA10796	10796	Terrabacteria group	Firmicutes	5.48868	35.2	-	AAEN01	30	6116	5672	6/3/04	5/18/17	Scaffold	J. Craig Venter Institute	SAMN02435891	GCA_000167235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/235/GCA_000167235.1_ASM16723v1	-	CNEVA-9066
Shigella flexneri 3a	424717	PRJNA279143	279143	Proteobacteria	Gammaproteobacteria	4.5084	50.5	-	LAJW01	486	4998	4102	7/21/15	8/8/17	Contig	U.S. Food and Drug Administration	SAMN03438047	GCA_001184155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/155/GCA_001184155.1_ASM118415v1	-	BS1061
Bifidobacterium longum subsp. longum	1679	PRJDB4597	325619	Terrabacteria group	Actinobacteria	2.44918	60	-	BCYL01	85	2170	1954	6/10/16	4/5/17	Contig	Yakult Central Institute	SAMD00047622	GCA_001686225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/225/GCA_001686225.1_ASM168622v1	27340092	LO-K29a
Lactococcus lactis subsp. cremoris	1359	PRJNA320691	320691	Terrabacteria group	Firmicutes	2.57444	35.7453	chromosome:NZ_CP015900.1/CP015900.1; plasmid pJM2A:NZ_CP016742.1/CP016742.1; plasmid pJM2B:NZ_CP016743.1/CP016743.1; plasmid pJM2C:NZ_CP016744.1/CP016744.1; plasmid pMPJM2:NZ_CP016745.1/CP016745.1	-	5	2659	2285	4/4/17	4/6/17	Complete Genome	University College Cork	SAMN04955242	GCA_002078915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/915/GCA_002078915.1_ASM207891v1	28356072	JM2
Lactococcus lactis subsp. cremoris	1359	PRJNA320683	320683	Terrabacteria group	Firmicutes	2.48649	35.7431	chromosome:NZ_CP015894.1/CP015894.1; plasmid p158A:NZ_CP016685.1/CP016685.1; plasmid p158B:NZ_CP016686.1/CP016686.1; plasmid p158C:NZ_CP016687.1/CP016687.1; plasmid p158D:NZ_CP016688.1/CP016688.1; plasmid p158E:NZ_CP016689.1/CP016689.1; plasmid p158F:NZ_CP016690.1/CP016690.1	-	7	2539	2190	4/4/17	4/5/17	Complete Genome	University College Cork	SAMN04954999	GCA_002078375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/375/GCA_002078375.1_ASM207837v1	28356072	158
Streptococcus agalactiae MC621	1333567	PRJNA203062	203062	Terrabacteria group	Firmicutes	2.04927	35.3	-	ATOY01	38	2091	2004	7/3/13	3/18/17	Scaffold	The Genome Institute	SAMN02436766	GCA_000419195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/195/GCA_000419195.2_S_agalactiaeMC621-1.0	-	MC621
Streptococcus suis 89-2479	1214169	PRJNA171431	171431	Terrabacteria group	Firmicutes	2.16808	41	-	ALLJ01	48	2190	2021	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469552	GCA_000440615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/615/GCA_000440615.1_version1	-	89-2479
Pseudomonas syringae pv. actinidiae ICMP 18804	1104682	PRJNA74971	74971	Proteobacteria	Gammaproteobacteria	6.25368	58.7	-	ANJE01	263	5885	5441	3/5/13	5/19/17	Contig	University of Otago	SAMN02471913	GCA_000344395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/395/GCA_000344395.1_ICMP18804v1.0	23555547	ICMP 18804
Vibrio vulnificus	672	PRJNA277724	277724	Proteobacteria	Gammaproteobacteria	4.7426	47	-	LAVT01	31	4482	3798	3/29/17	4/17/17	Contig	University of Valencia	SAMN03395016	GCA_002074875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/875/GCA_002074875.1_ASM207487v1	25435180	11028
Bacillus licheniformis F2-1	1433291	PRJNA230654	230654	Terrabacteria group	Firmicutes	4.24043	46.1	-	AZSM01	49	4429	4252	3/28/14	4/18/17	Scaffold	The University of Queensland	SAMN02486612	GCA_000603985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/985/GCA_000603985.1_Bacillus_licheniformis_strain_F2-1	24657871	F2-1
Lactococcus lactis subsp. cremoris	1359	PRJNA320693	320693	Terrabacteria group	Firmicutes	2.50155	35.7187	chromosome:NZ_CP015909.1/CP015909.1; plasmid pJM4A:NZ_CP016729.1/CP016729.1; plasmid pJM4B:NZ_CP016730.1/CP016730.1; plasmid pJM4C:NZ_CP016731.1/CP016731.1; plasmid pJM4D:NZ_CP016732.1/CP016732.1; plasmid pJM4E:NZ_CP016733.1/CP016733.1	-	6	2596	2257	4/4/17	4/6/17	Complete Genome	University College Cork	SAMN04955246	GCA_002078955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/955/GCA_002078955.1_ASM207895v1	28356072	JM4
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.70167	50.7	-	CXKJ01	398	5300	4517	7/16/15	2/24/17	Contig	SC	SAMEA2004868	GCA_001258135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/135/GCA_001258135.1_8290_4_41	-	99443
Bacteroides fragilis str. 3-F-2 #6	1339335	PRJNA206178	206178	FCB group	Bacteroidetes/Chlorobi group	5.30046	43.1	-	JGDT01	201	4829	4490	3/20/14	4/18/17	Contig	IGS	SAMN02315072	GCA_000598865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/865/GCA_000598865.1_ASM59886v1	-	3-F-2 #6
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.14781	38.7	-	NGPB01	107	2172	1963	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848403	GCA_002253625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/625/GCA_002253625.1_ASM225362v1	-	609i
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.01464	67.1	-	MUQY01	297	7662	7160	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001835	GCA_001991375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/375/GCA_001991375.1_ASM199137v1	-	VC14815
Staphylococcus agnetis	985762	PRJNA246192	246192	Terrabacteria group	Firmicutes	2.5034	35.7167	chromosome:NZ_CP009623.1/CP009623.1; plasmid unamed:NZ_CP009624.1/CP009624.1	-	2	2482	2375	11/12/15	4/11/17	Complete Genome	University of Arkansas	SAMN02743857	GCA_001442815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/815/GCA_001442815.1_ASM144281v1	-	908
Streptococcus agalactiae	1311	PRJNA293561	293561	Terrabacteria group	Firmicutes	2.07912	35.7038	chromosome:NZ_CP012480.1/CP012480.1; plasmid pNGBS128:NZ_CP012742.1/CP012742.1	-	2	2124	1917	2/4/16	3/19/17	Complete Genome	Public Health Ontario	SAMN04007140	GCA_001552035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/035/GCA_001552035.1_ASM155203v1	26843175	NGBS128
Burkholderia mallei	13373	PRJNA257008	257008	Proteobacteria	Betaproteobacteria	5.79852	68.5	-	LUFO01	628	6195	5559	4/4/16	4/5/17	Contig	µFORGE	SAMN04260155	GCA_001608335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/335/GCA_001608335.1_BMAL005-SEQ-1-ASM-1	-	Kweiyang#4
Bacillus thuringiensis IBL 200	527019	PRJNA29733	29733	Terrabacteria group	Firmicutes	6.73179	34.5	chromosome:NZ_CM000758.1/CM000758.1	ACNK01	1	13789	13093	4/30/09	5/18/17	Chromosome	Naval Medical Research Center	SAMN00727642	GCA_000161715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/715/GCA_000161715.1_ASM16171v1	22645259	IBL 200
Ralstonia solanacearum	305	PRJNA257008	257008	Proteobacteria	Betaproteobacteria	5.24293	66.7	-	LVKU01	118	4657	4431	8/2/16	4/5/17	Contig	µFORGE	SAMN04216072	GCA_001696845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/845/GCA_001696845.1_RSOL003-SEQ-1-ASM-1	-	UW491
Vibrio cholerae HFU-02	991989	PRJNA63985	63985	Proteobacteria	Gammaproteobacteria	4.03285	47.5	-	AFOS01	110	3836	3674	7/26/11	3/22/17	Scaffold	Institute for Genome Sciences	SAMN00249595	GCA_000221425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/425/GCA_000221425.1_ASM22142v1	-	HFU-02
Clostridioides difficile	1496	PRJNA264745	264745	Terrabacteria group	Firmicutes	4.51215	29.1	-	JXBP01	54	4319	4136	1/26/15	3/16/17	Scaffold	Universidad de Costa Rica	SAMN03275179	GCA_000828235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/235/GCA_000828235.1_ASM82823v1	25653402	LIBA-5701
Shigella boydii	621	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.86034	50.7	-	NQFM01	152	5120	4754	8/11/17	8/15/17	Contig	JCVI	SAMN07450713	GCA_002249645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/645/GCA_002249645.1_ASM224964v1	-	ECCTRSRTH11
Francisella tularensis	263	PRJNA244562	244562	Proteobacteria	Gammaproteobacteria	1.8834	32.3	-	JOOV01	1	1940	1646	8/19/14	4/2/17	Scaffold	Los Alamos National Laboratory	SAMN02870078	GCA_000742145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/145/GCA_000742145.1_ASM74214v1	25291764	FTX
Brucella abortus 63/130	1169207	PRJNA173521	173521	Proteobacteria	Alphaproteobacteria	3.30442	57.2	-	AQIU01	4	3382	3135	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00839718	GCA_000369985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/985/GCA_000369985.1_Bruc_abor_63_130_V1	-	63/130
Xanthomonas citri subsp. citri	611301	PRJEB7151	306108	Proteobacteria	Gammaproteobacteria	5.27821	64.7	-	CCWI01	57	5156	5080	12/16/15	12/16/15	Scaffold	Genoscope CEA	SAMEA2752280	GCA_001492595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/595/GCA_001492595.1_ASX_F_PRJEB7151_v1	-	-
Campylobacter fetus subsp. fetus	32019	PRJEB8721	292173	Proteobacteria	delta/epsilon subdivisions	1.73315	33.9	-	FAUT01	10	1833	1726	11/29/15	4/4/17	Scaffold	SC	SAMEA3403191	GCA_001486865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/486/865/GCA_001486865.1_17059_2_3	-	006A-0196
Xanthomonas oryzae pv. oryzae	64187	PRJNA269415	269415	Proteobacteria	Gammaproteobacteria	4.2243	63.9	-	JXEL01	432	4210	3370	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252531	GCA_001927705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/705/GCA_001927705.1_ASM192770v1	-	DXO-27
Oenococcus oeni S23	1428443	PRJNA229733	229733	Terrabacteria group	Firmicutes	1.80546	38	-	AZLL01	50	1839	1684	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02904294	GCA_000762225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/225/GCA_000762225.1_Oeoe_S23_1.0	24901216	S23
Streptococcus mitis	28037	PRJNA304678	304678	Terrabacteria group	Firmicutes	2.00841	40.1	-	NCVL01	57	2095	1947	4/18/17	4/21/17	Scaffold	Slagelse Hospital	SAMN06705597	GCA_002096915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/915/GCA_002096915.1_ASM209691v1	27325438	OD_310347_11
Vibrio parahaemolyticus	670	PRJNA275536	275536	Proteobacteria	Gammaproteobacteria	5.26903	45.2	-	JYJU01	333	4999	4741	5/12/15	3/17/17	Scaffold	Health Canada	SAMN03349611	GCA_001006185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/185/GCA_001006185.1_ASM100618v1	-	Oct-87
Streptococcus agalactiae	1311	PRJNA293392	293392	Terrabacteria group	Firmicutes	2.20834	35.7	chromosome:NZ_CP021867.1/CP021867.1	-	1	2319	2156	6/16/17	6/21/17	Complete Genome	Singapore Streptococcus agalactiae working group	SAMN05384059	GCA_002197305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/305/GCA_002197305.1_ASM219730v1	28475781	SG-M25
Streptococcus agalactiae	1311	PRJNA376652	376652	Terrabacteria group	Firmicutes	2.09688	35.7	chromosome:NZ_CP019979.1/CP019979.1	-	1	2190	2000	3/13/17	3/15/17	Complete Genome	"Ruijin Hospital, Shanghai Jiaotong University School of Medicine"	SAMN06445344	GCA_002025005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/005/GCA_002025005.1_ASM202500v1	-	Sag158
Clostridium botulinum CB11/1-1	1289590	PRJNA188396	188396	Terrabacteria group	Firmicutes	3.82331	27.1	-	AORM01	171	3464	3263	4/5/13	3/23/17	Contig	"Institute of Biotechnology, University of Helsinki"	SAMN02471792	GCA_000353835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/835/GCA_000353835.1_ASM35383v1	-	CB11/1-1
Brucella suis	29461	PRJNA338969	338969	Proteobacteria	Alphaproteobacteria	3.31799	57.2364	chromosome 1:CP017012.1; chromosome 2:CP017013.1	-	2	3153	2030	12/19/16	12/19/16	Chromosome	Viginia Tech University	SAMN05578251	GCA_001908355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/355/GCA_001908355.1_ASM190835v1	-	2011017258
Enterococcus faecalis Merz96	565645	PRJNA32933	32933	Terrabacteria group	Firmicutes	3.08525	37.7	-	ACAM01	21	3088	2941	6/12/09	3/22/17	Scaffold	Broad Institute	SAMN02595258	GCA_000157315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/315/GCA_000157315.1_ASM15731v1	-	Merz96
Streptococcus mutans TCI-244	1074171	PRJNA72085	72085	Terrabacteria group	Firmicutes	1.77114	37	-	AGLZ01	143	1792	1668	10/6/11	3/22/17	Contig	JCVI	SAMN02436436	GCA_000229685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/685/GCA_000229685.2_SMUT6-NEX_93-244	-	TCI-244
Neisseria gonorrhoeae SK1902	1352530	PRJNA209316	209316	Proteobacteria	Betaproteobacteria	2.1655	52.4	-	ATPF01	501	2607	2157	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02338783	GCA_001026145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/145/GCA_001026145.1_ASM102614v1	-	SK1902
Enterococcus faecium R497	1134837	PRJNA82063	82063	Terrabacteria group	Firmicutes	2.99014	37.6	-	AMAG01	283	3096	2888	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299512	GCA_000294895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/895/GCA_000294895.2_ASM29489v2	-	R497
Elizabethkingia genomosp. 4	1756150	PRJNA326741	326741	FCB group	Bacteroidetes/Chlorobi group	4.21672	35.7	chromosome:NZ_CP016377.1/CP016377.1	-	1	3856	3730	3/6/17	3/8/17	Complete Genome	CDC	SAMN05281858	GCA_002022125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/125/GCA_002022125.1_ASM202212v1	-	G4123
Stenotrophomonas maltophilia	40324	PRJEB9726	294149	Proteobacteria	Gammaproteobacteria	4.38684	66.5	-	CWHS01	34	4060	3881	8/27/15	3/26/17	Contig	KAUST	SAMEA3751020	GCA_001286925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/925/GCA_001286925.1_Stenotrophomonas_maltophilia_mecca_isolate	-	-
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15049	41.2	-	CWEM01	89	2081	1906	6/24/15	3/26/17	Contig	SC	SAMEA1032806	GCA_001175905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/905/GCA_001175905.1_6903_7_42	-	EQUI0187
Pasteurella multocida	747	PRJNA251433	251433	Proteobacteria	Gammaproteobacteria	2.30191	40.4	-	JNOL01	31	2188	2089	7/18/14	4/2/17	Scaffold	University of Minnesota	SAMN02839403	GCA_000731745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/745/GCA_000731745.1_ASM73174v1	25103770	3213
Lactobacillus rhamnosus	47715	PRJNA315956	315956	Terrabacteria group	Firmicutes	3.05301	46.8	-	LWBT01	72	3118	2874	5/17/16	4/5/17	Contig	Vavilov Institute of General Genetics	SAMN04366754	GCA_001645615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/615/GCA_001645615.1_ASM164561v1	-	R19-3
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31363	57.2358	chromosome 1:NZ_CP018518.1/CP018518.1; chromosome 2:NZ_CP018519.1/CP018519.1	-	2	3371	3148	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932967	GCA_002192015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/015/GCA_002192015.1_ASM219201v1	28388689	BwIM_SYR_08
Elizabethkingia anophelis	1117645	PRJNA326741	326741	FCB group	Bacteroidetes/Chlorobi group	4.00621	35.7	chromosome:NZ_CP016373.1/CP016373.1	-	1	3704	3578	3/6/17	3/8/17	Complete Genome	CDC	SAMN05273152	GCA_002022065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/065/GCA_002022065.1_ASM202206v1	-	3375
Bordetella bronchiseptica MBORD595	1331220	PRJNA202132	202132	Proteobacteria	Betaproteobacteria	5.21498	68.2	-	JGXH01	107	4948	4783	5/12/14	4/2/17	Contig	JCVI	SAMN02231441	GCA_000690475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/475/GCA_000690475.1_gbb24v01	25908122	MBORD595
Corynebacterium diphtheriae	1717	PRJNA357972	357972	Terrabacteria group	Actinobacteria	2.48505	53.4	-	MSBU01	166	2398	2083	1/4/17	4/10/17	Contig	"CMC, Vellore"	SAMN06163069	GCA_001935905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/935/905/GCA_001935905.1_ASM193590v1	-	CMCTH1506
Mycoplasma pneumoniae	2104	PRJNA267612	267612	Terrabacteria group	Tenericutes	0.805308	39.9	-	JTHC01	16	791	694	12/2/15	4/4/17	Scaffold	Capital Institute of Pediatrics	SAMN03142259	GCA_001455735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/735/GCA_001455735.1_ASM145573v1	-	CIP12267
Yersinia enterocolitica	630	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.07366	47.5	-	NBTC01	2	4689	4323	4/10/17	4/13/17	Contig	US Food and Drug Administration 	SAMN04875564	GCA_002082245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/245/GCA_002082245.1_ASM208224v1	-	FDAARGOS_227
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.06409	41.6	-	JJQQ01	176	3491	3271	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708970	GCA_000980025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/025/GCA_000980025.1_gtlEnvA5udCFS	25756680	1.H.M.0.1
Serratia marcescens	615	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.24826	59.9	-	JTBR01	1	4933	4662	11/14/14	7/6/17	Contig	US Food and Drug Administration 	SAMN02934514	GCA_000783915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/915/GCA_000783915.1_ASM78391v1	-	FDAARGOS_65
Lactobacillus plantarum IPLA88	1328309	PRJNA198827	198827	Terrabacteria group	Firmicutes	3.25406	44.4	-	ASJE01	208	3161	3001	6/13/13	3/24/17	Contig	Instituto de Productos Lacteos de Asturias (IPLA-CSIC)	SAMN02470055	GCA_000410795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/795/GCA_000410795.1_LplantarumLP882.0	23887921	IPLA88
Mannheimia haemolytica	75985	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.66475	41	-	LQEZ01	80	2755	2601	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366547	GCA_001930615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/615/GCA_001930615.1_ASM193061v1	-	2887MH
Campylobacter coli 67-8	887284	PRJNA52705	52705	Proteobacteria	delta/epsilon subdivisions	1.50269	31.3	-	AINI01	137	1612	1514	3/16/12	3/15/17	Contig	Cornell University	SAMN02429061	GCA_000253935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/935/GCA_000253935.2_ASM25393v2	-	67-8
Burkholderia sp. TSV86	1385594	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	5.81869	63.8	-	LOWB01	135	5249	4868	1/21/16	4/11/17	Contig	Northern Arizona University	SAMN03449219	GCA_001522865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/522/865/GCA_001522865.1_ASM152286v1	-	TSV86
Propionibacterium acnes HL059PA1	765091	PRJNA49215	49215	Terrabacteria group	Actinobacteria	2.47509	60	-	ADYW01	20	2489	2360	7/30/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189228	GCA_000144855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/855/GCA_000144855.1_ASM14485v1	-	HL059PA1
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.49396	32.7	-	CUHK01	74	2455	2343	3/31/15	3/26/17	Contig	SC	SAMEA1035085	GCA_001233265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/265/GCA_001233265.1_7068_7_66	-	89727
Proteus mirabilis	584	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.94049	38.6	-	JVKD01	141	3601	3491	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197551	GCA_001063205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/205/GCA_001063205.1_ASM106320v1	26230489	360_PMIR
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.89688	55.2	-	LDEO01	209	4893	4573	6/10/15	3/26/17	Scaffold	University of Minnesota	SAMN03333170	GCA_001025045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/045/GCA_001025045.1_ASM102504v1	26438492	MNCRE81
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.93178	55.6	-	FKZA01	28	5776	5522	5/19/16	2/21/17	Scaffold	SC	SAMEA2273597	GCA_900083695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/695/GCA_900083695.1_12045_6_61	-	2880STDY5682512
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.46353	56.9	-	MRXC01	235	4389	4120	3/31/17	4/6/17	Contig	FDA/CFSAN	SAMN06100268	GCA_002075545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/545/GCA_002075545.1_ASM207554v1	-	MOD1-Md33s
Lactobacillus salivarius	1624	PRJNA357984	357984	Terrabacteria group	Firmicutes	1.99896	32.5	-	NBEL01	50	1979	1848	4/5/17	4/8/17	Scaffold	University College Cork	SAMN06163262	GCA_002079565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/565/GCA_002079565.1_ASM207956v1	-	gul1
Mycobacterium abscessus 3A-0122-R	1001715	PRJNA65159	65159	Terrabacteria group	Actinobacteria	5.23138	64.1	-	AKUY01	33	5319	5198	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00715826	GCA_000270845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/845/GCA_000270845.1_ASM27084v1	-	3A-0122-R
Bifidobacterium breve	1685	PRJNA272371	272371	Terrabacteria group	Actinobacteria	1.09419	59.2	-	LSUH01	7	936	868	2/29/16	2/29/16	Contig	National University of Singapore	SAMN04497912	GCA_001576875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/875/GCA_001576875.1_ASM157687v1	-	-
Elizabethkingia anophelis	1117645	PRJNA315668	315668	FCB group	Bacteroidetes/Chlorobi group	3.85345	35.7	chromosome:NZ_CP015067.2/CP015067.2	-	1	3505	3400	4/11/16	4/5/17	Complete Genome	Bacterial Special Pathogens Branch (CDC)	SAMN04567738	GCA_001618505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/505/GCA_001618505.2_ASM161850v2	27313304	CSID_3000521207
Vibrio sp. V04_P4A5T148	1938659	PRJNA361511	361511	Proteobacteria	Gammaproteobacteria	3.92125	44.6	-	NDHZ01	113	3713	3502	8/4/17	8/6/17	Scaffold	Instituto de ecologia	SAMN06251400	GCA_002241075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/075/GCA_002241075.1_V04_P4A5T148	-	V04_P4A5T148
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.46351	63.2	-	DBRY01	28	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452909	GCA_002306135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/135/GCA_002306135.1_ASM230613v1	28894102	-
Aeromonas hydrophila	644	PRJNA379721	379721	Proteobacteria	Gammaproteobacteria	4.99895	60.9	-	NADM01	36	4610	4426	4/17/17	4/21/17	Scaffold	"Institute of Hydrobiology, Chinese Academy of Sciences"	SAMN06618438	GCA_002093135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/135/GCA_002093135.1_ASM209313v1	-	Ah DBHS101
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.04113	67.5	-	LPAV01	108	6361	6011	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449358	GCA_001526625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/625/GCA_001526625.1_ASM152662v1	-	MSMB1637WGS
Flavobacterium psychrophilum	96345	PRJEB21067	396411	FCB group	Bacteroidetes/Chlorobi group	2.58257	32.5	-	FYDA01	73	2336	2242	7/29/17	8/7/17	Contig	INRA	SAMEA104126822	GCA_900186825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/825/GCA_900186825.1_NO042_V1	-	NO042
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.73585	47.6	-	MDZQ01	82	3435	3273	11/17/16	4/5/17	Contig	The University of Queensland	SAMN04320392	GCA_001883745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/745/GCA_001883745.1_ASM188374v1	-	90/4316
Lactobacillus paracasei	1597	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.05999	46.1	-	MKFY01	58	3160	2974	2/1/17	4/6/17	Scaffold	ETH Zurich	SAMN05717723	GCA_001981715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/715/GCA_001981715.1_ASM198171v1	-	RI-210
Streptococcus oralis	1303	PRJNA302716	302716	Terrabacteria group	Firmicutes	1.91357	41.4	-	LWCF01	40	1885	1795	4/29/16	4/5/17	Scaffold	TAILORED-Treatment project	SAMN04625306	GCA_001639375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/375/GCA_001639375.1_ASM163937v1	-	CCUG 24891
Acinetobacter nosocomialis	106654	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.23342	38.4	-	DGCH01	411	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454237	GCA_002384525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/525/GCA_002384525.1_ASM238452v1	28894102	-
Klebsiella variicola	244366	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.60161	57.2	-	NGSO01	4	5504	5265	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521849	GCA_002153075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/075/GCA_002153075.1_ASM215307v1	-	BIDMC117
Pseudoalteromonas sp. TB25	985258	PRJNA202428	202428	Proteobacteria	Gammaproteobacteria	4.64866	39.2	-	AUTI01	458	4384	3730	11/20/13	4/17/17	Scaffold	University of Florence	SAMN02260213	GCA_000497995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/995/GCA_000497995.1_TB25	28095778	TB25
Campylobacter iguaniorum	1244531	PRJNA177183	177183	Proteobacteria	delta/epsilon subdivisions	1.80962	35.7	chromosome:NZ_CP010995.1/CP010995.1	-	1	1904	1830	1/4/16	4/11/17	Complete Genome	Utrecht University	SAMN03378131	GCA_001483985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/483/985/GCA_001483985.1_ASM148398v1	-	2463D
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	3.8796	38.7	-	MDHS01	68	3736	3610	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022853	GCA_001706035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/035/GCA_001706035.1_ASM170603v1	-	UKK-0145
Citrobacter freundii	546	PRJNA252011	252011	Proteobacteria	Gammaproteobacteria	5.33159	51.5	-	JRSW01	169	5364	5078	10/26/15	4/4/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02872767	GCA_001413045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/045/GCA_001413045.1_ASM141304v1	25501822	RU2 LB27
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.20232	54.9	-	JZYT01	102	5128	4905	3/19/15	3/25/17	Contig	JCVI	SAMN03283681	GCA_000957165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/165/GCA_000957165.1_ASM95716v1	-	35728
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.30878	55	-	LDBL01	54	5236	4988	5/21/15	4/6/17	Contig	JCVI	SAMN03495948	GCA_001011495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/495/GCA_001011495.1_ASM101149v1	-	GN02509
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.84006	64.2	-	FVVJ01	17	4774	4632	3/10/17	3/18/17	Contig	SC	SAMEA2160080	GCA_900139985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/985/GCA_900139985.1_10660_1_49	-	512
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.29893	66.9	-	LPBP01	71	7732	7390	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449378	GCA_001526785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/785/GCA_001526785.1_ASM152678v1	-	MSMB1829WGS
Pseudomonas sp. URMO17WK12:I12	1259797	PRJNA179452	179452	Proteobacteria	Gammaproteobacteria	6.56843	59.1	-	AZVV01	32	6091	5894	1/3/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02597226	GCA_000514395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/395/GCA_000514395.1_ASM51439v1	-	URMO17WK12:I12
Streptomyces sp. CNY228	1169159	PRJNA177736	177736	Terrabacteria group	Actinobacteria	6.95915	73.5	-	ARIN01	49	6092	5892	4/22/13	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441350	GCA_000377545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/545/GCA_000377545.1_ASM37754v1	-	CNY228
Bacillus sp. JFL15	1679193	PRJNA288238	288238	Terrabacteria group	Firmicutes	3.84123	46.4	-	LFWQ01	5	3844	3634	7/21/15	4/10/17	Scaffold	South China Agricultural University	SAMN03796075	GCA_001184225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/225/GCA_001184225.1_ASM118422v1	-	JFL15
Acinetobacter sp. P8-3-8	1029823	PRJNA66629	66629	Proteobacteria	Gammaproteobacteria	3.89233	37.6	-	AFIE01	204	3693	3494	5/19/11	4/6/17	Contig	Genome Resource Center	SAMN02470194	GCA_000214135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/135/GCA_000214135.2_ASM21413v1	21685286	P8-3-8
Clostridium sp. IBUN13A	1523156	PRJNA255517	255517	Terrabacteria group	Firmicutes	4.64359	28.6	-	JZWG01	261	4229	3961	4/2/15	4/10/17	Contig	Universidad Nacional de Colombia	SAMN02924070	GCA_000968315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/315/GCA_000968315.1_CLOSIBUN13Av1.0	25999575	IBUN13A
Sphingomonas sp. Leaf23	1735689	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	3.80443	67	-	LMKR01	8	3541	3432	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151587	GCA_001421585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/585/GCA_001421585.1_Leaf23	26633631	Leaf23
Synechococcus sp. TMED66	1986599	PRJNA385857	385857	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.15344	53.8	-	NHDT01	105	2390	2274	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971920	GCA_002171685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/685/GCA_002171685.1_ASM217168v1	-	-
Rhodococcus sp. 06-469-3-2	2022510	PRJNA395383	395383	Terrabacteria group	Actinobacteria	6.0279	64.6	-	NOYC01	36	5664	5496	8/18/17	8/21/17	Contig	Oregon State University	SAMN07376380	GCA_002258305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/305/GCA_002258305.1_ASM225830v1	-	06-469-3-2
Enterobacter sp. BIDMC110	1686401	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.01356	55.4	-	LETQ01	9	4915	4669	6/19/15	4/10/17	Scaffold	Broad Institute	SAMN03280193	GCA_001037905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/905/GCA_001037905.1_Ente_cloa_complex_BIDMC110_V1	-	BIDMC110
Staphylococcus sp. HMSC073C02	1739360	PRJNA300010	300010	Terrabacteria group	Firmicutes	2.4236	32	-	LTEF01	71	2395	2291	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477666	GCA_001812445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/445/GCA_001812445.1_ASM181244v1	-	HMSC073C02
Corynebacterium sp. HMSC077G01	1715193	PRJNA296321	296321	Terrabacteria group	Actinobacteria	2.46178	58.8	-	LTIG01	59	2177	2089	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477550	GCA_001810195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/195/GCA_001810195.1_ASM181019v1	-	HMSC077G01
Arthrobacter sp. Hiyo1	1588020	PRJDB3373	291832	Terrabacteria group	Actinobacteria	4.3391	63.2	-	BBUD01	1063	4563	3098	8/4/15	4/17/17	Contig	"Department of Computational Biology, Graduate School of Frontier Sciences, The University of Tokyo"	SAMD00024042	GCA_001263615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/615/GCA_001263615.1_ASM126361v1	26764021	Hiyo1
Bradyrhizobium sp. LTSP849	1615890	PRJNA275239	275239	Proteobacteria	Alphaproteobacteria	8.57016	63.2	-	JYMR01	57	8063	7841	3/3/15	4/10/17	Scaffold	University of British Columbia	SAMN03340218	GCA_000938255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/255/GCA_000938255.1_ASM93825v1	-	LTSP849
Streptococcus sp. HMSC073A12	1739380	PRJNA300030	300030	Terrabacteria group	Firmicutes	1.96733	38.5	-	LTXT01	51	1996	1805	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480044	GCA_001812815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/815/GCA_001812815.1_ASM181281v1	-	HMSC073A12
Mycobacterium sp. HXXIII	1720577	PRJNA294421	294421	Terrabacteria group	Actinobacteria	5.72461	63.9	-	LJYT01	97	5748	5475	11/6/15	4/11/17	Contig	US EPA	SAMN04091155	GCA_001440305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/305/GCA_001440305.1_ASM144030v1	-	HXXIII
Prevotella sp. ne3005	1761887	PRJEB16906	351058	FCB group	Bacteroidetes/Chlorobi group	3.56761	49	-	FOCK01	21	3046	2924	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487902	GCA_900110085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/085/GCA_900110085.1_IMG-taxon_2623620457_annotated_assembly	-	NE3005
Enterococcus sp. 3G6_DIV0642	1834177	PRJNA313452	313452	Terrabacteria group	Firmicutes	3.55107	42.7	-	NGLH01	2	3466	3330	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634077	GCA_002140635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/635/GCA_002140635.1_ASM214063v1	-	3G6_DIV0642
Treponema sp. UBA4873	1947734	PRJNA348753	348753	Spirochaetes	Spirochaetia	4.02458	49.4	-	DHDP01	23	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454298	GCA_002399405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/399/405/GCA_002399405.1_ASM239940v1	28894102	-
Methylobacterium sp. yr596	1761800	PRJEB17258	351412	Proteobacteria	Alphaproteobacteria	6.57233	71.3	-	FONO01	84	6107	5773	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487844	GCA_900112945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/945/GCA_900112945.1_IMG-taxon_2615840644_annotated_assembly	-	YR596
Paenibacillus sp. VT-400	1495853	PRJNA245893	245893	Terrabacteria group	Firmicutes	6.98562	45.8	-	LELF01	115	6092	5875	6/17/15	4/10/17	Contig	Institute Of Human Microbiology LLC	SAMN02741403	GCA_001029205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/205/GCA_001029205.1_ASM102920v1	26272571	VT-400
Thioalkalivibrio sp. ALE19	1266909	PRJNA183021	183021	Proteobacteria	Gammaproteobacteria	3.11828	67.1	-	AUAG01	67	3064	2912	7/15/13	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441557	GCA_000428605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/605/GCA_000428605.1_ASM42860v1	-	ALE19
Bacteroides sp. CAG:633	1262744	PRJEB968	206931	FCB group	Bacteroidetes/Chlorobi group	3.64175	47.4	-	CBDA01	225	3051	3004	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138642	GCA_000435115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/115/GCA_000435115.1_MGS633	-	-
Prochlorococcus sp. scB243_498A3	1471487	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.47254	31.3	-	JFML01	255	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671358	GCA_000634295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/295/GCA_000634295.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. BCW_4335	1903593	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.7256	30.2	-	MJYH01	91	1805	1630	10/4/16	4/13/17	Scaffold	University of California at Davis	SAMN03358057	GCA_001763205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/205/GCA_001763205.1_ASM176320v1	-	BCW_4335
Neisseria sp. HMSC071C03	1739257	PRJNA299907	299907	Proteobacteria	Betaproteobacteria	2.36397	51.4	-	LTYM01	114	2294	2122	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498674	GCA_001838415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/415/GCA_001838415.1_ASM183841v1	-	HMSC071C03
Rhizobium sp. Root564	1736563	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	5.18727	58.3	-	LMGN01	24	4876	4753	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04155832	GCA_001427405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/405/GCA_001427405.1_Root564	26633631	Root564
Mesorhizobium sp. LNJC384A00	1287268	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.5316	62.6	-	AYWK01	54	6490	6010	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359670	GCA_000502975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/975/GCA_000502975.1_Mloti_LNJC384A00	-	LNJC384A00
Microbacterium sp. H83	1827324	PRJNA317658	317658	Terrabacteria group	Actinobacteria	3.53433	69.6	-	LWCU01	56	3484	3347	5/24/16	4/12/17	Contig	UC Berkeley	SAMN04622671	GCA_001650405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/405/GCA_001650405.1_ASM165040v1	-	H83
Bacillus velezensis	492670	PRJNA307263	307263	Terrabacteria group	Firmicutes	3.85624	46.5	-	LQCL01	19	3815	3652	1/19/16	3/22/17	Contig	NCAUR-ARS-USDA	SAMN04377520	GCA_001517185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/185/GCA_001517185.1_ASM151718v1	-	RC218
Gilliamella apicola	1196095	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.9427	34	-	NARO01	102	2684	2571	5/16/17	5/24/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603516	GCA_002141675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/675/GCA_002141675.1_ASM214167v1	-	A-12-12
Klebsiella michiganensis	1134687	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.99206	55.9	-	JUSQ01	241	5825	5574	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03198005	GCA_001077175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/175/GCA_001077175.1_ASM107717v1	26230489	793_KOXY
Achromobacter sp. UBA1582	1945910	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	6.22981	64.3	-	DCOA01	447	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455554	GCA_002322215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/215/GCA_002322215.1_ASM232221v1	28894102	-
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.71505	50.9	-	MPQZ01	97	2694	2543	3/6/17	3/9/17	Scaffold	Harvard University	SAMN06016272	GCA_002021855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/855/GCA_002021855.1_ASM202185v1	-	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.80302	57	-	FXMO01	106	5889	5511	4/28/17	5/6/17	Scaffold	SC	SAMEA2609375	GCA_900180725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/725/GCA_900180725.1_14936_2_76	-	3189STDY5864930
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.72272	32.3	-	FQRB01	12	2691	2520	11/25/16	4/6/17	Contig	SC	SAMEA3449077	GCA_900128175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/175/GCA_900128175.1_17175_3_21	-	3688STDY6125069
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.56058	67.7	-	LPLJ01	112	6870	6503	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449643	GCA_001534185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/185/GCA_001534185.1_ASM153418v1	-	MSMB749WGS
Xanthomonas axonopodis pv. manihotis str. UG51	1185715	PRJNA163825	163825	Proteobacteria	Gammaproteobacteria	4.87129	65.1	-	AKFD01	140	4327	4019	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090360	GCA_000266625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/625/GCA_000266625.1_UG51	22699502	UG51
Xanthomonas axonopodis pv. manihotis str. Xam1134	1185658	PRJNA163711	163711	Proteobacteria	Gammaproteobacteria	4.89484	65.1	-	AKFE01	158	4363	4044	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090300	GCA_000266645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/645/GCA_000266645.1_Xam1134	22699502	Xam1134
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.51296	67.7	-	LPLN01	107	6852	6503	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449647	GCA_001534205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/205/GCA_001534205.1_ASM153420v1	-	MSMB757WGS
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79489	32.3	-	FQRE01	17	2801	2622	11/25/16	4/6/17	Contig	SC	SAMEA3449081	GCA_900128185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/185/GCA_900128185.1_17175_3_25	-	3688STDY6125073
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.78295	57	-	FXMN01	111	5856	5480	4/28/17	5/6/17	Scaffold	SC	SAMEA2609410	GCA_900180755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/755/GCA_900180755.1_14936_2_86	-	3189STDY5864940
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.53413	50.8	-	MPRV01	69	2471	2401	3/6/17	3/6/17	Contig	Harvard University	SAMN06016293	GCA_002021265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/265/GCA_002021265.1_ASM202126v1	-	-
Achromobacter sp. UBA2119	1945911	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	6.18364	65.2	-	DCYD01	23	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455337	GCA_002331005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/005/GCA_002331005.1_ASM233100v1	28894102	-
Klebsiella michiganensis	1134687	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	6.43832	55.7	-	NGSM01	11	6323	5908	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521924	GCA_002152315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/315/GCA_002152315.1_ASM215231v1	-	MGH175
Gilliamella apicola	1196095	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.92955	34	-	NARR01	110	2660	2543	5/16/17	5/23/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603519	GCA_002141715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/715/GCA_002141715.1_ASM214171v1	-	A-8-12
Bacillus velezensis	492670	PRJNA311096	311096	Terrabacteria group	Firmicutes	4.03978	46.2	-	LSZM01	51	3990	3820	5/19/16	3/22/17	Contig	Auburn University	SAMN04461072	GCA_001647945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/945/GCA_001647945.1_ASM164794v1	-	AP214
Microbacterium sp. CSI-V	1933777	PRJNA360622	360622	Terrabacteria group	Actinobacteria	3.71416	70.7	-	MTQM01	9	3535	3446	2/3/17	4/17/17	Contig	Los Alamos National Laboratory	SAMN06213903	GCA_001984105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/105/GCA_001984105.1_ASM198410v1	28087533	CSI-V
Mesorhizobium sp. LNJC398B00	1287276	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	5.961	62.8	-	AYWF01	31	5851	5529	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359675	GCA_000502995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/502/995/GCA_000502995.1_Mloti_LNJC398B00	-	LNJC398B00
Rhizobium sp. Root268	1736506	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	5.34551	61.8	-	LMJD01	32	5038	4852	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04155775	GCA_001428925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/925/GCA_001428925.1_Root268	26633631	Root268
Neisseria sp. HMSC70E02	1608896	PRJNA274548	274548	Proteobacteria	Betaproteobacteria	2.76761	50.9	-	LTNC01	111	2803	2583	10/25/16	8/4/17	Scaffold	The Genome Institute at Washington University	SAMN04498886	GCA_001838645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/645/GCA_001838645.1_ASM183864v1	-	HMSC70E02
Campylobacter sp. BCW_4337	1903594	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.80632	30.2	-	MJYI01	68	1896	1729	10/4/16	4/13/17	Scaffold	University of California at Davis	SAMN03358058	GCA_001763235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/235/GCA_001763235.1_ASM176323v1	-	BCW_4337
Prochlorococcus sp. scB243_498J20	1471494	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.860969	31.3	-	JFMS01	351	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671365	GCA_000634315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/315/GCA_000634315.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Bacteroides sp. CAG:875	1262752	PRJEB1024	206903	FCB group	Bacteroidetes/Chlorobi group	3.24541	46.1	-	CBHD01	161	2641	2612	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138657	GCA_000435415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/415/GCA_000435415.1_MGS875	-	-
Thioalkalivibrio sp. ALJ1	1158144	PRJNA181378	181378	Proteobacteria	Gammaproteobacteria	2.7661	64.1	-	JQIW01	5	2688	2532	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02194616	GCA_000745395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/395/GCA_000745395.1_ASM74539v1	-	ALJ1
Paenibacillus sp. Mc5Re-14	1030529	PRJEB9156	285309	Terrabacteria group	Firmicutes	6.03891	45.2	-	CVPD01	3	5396	4999	5/28/15	8/1/17	Contig	TUGRAZ	SAMEA3373828	GCA_001049835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/835/GCA_001049835.1_Mc5Re-14_upgraded	-	Mc5Re-14
Methylobacterium sp. yr668	1761801	PRJEB17550	352023	Proteobacteria	Alphaproteobacteria	6.62316	71.1	-	FOZY01	99	6318	6020	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487845	GCA_900116245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/245/GCA_900116245.1_IMG-taxon_2609459632_annotated_assembly	-	YR668
Enterococcus sp. 3H8_DIV0648	1834178	PRJNA313452	313452	Terrabacteria group	Firmicutes	5.08905	41.5	-	NGLG01	25	4623	4339	5/16/17	7/9/17	Scaffold	Broad Institute	SAMN04634074	GCA_002140655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/655/GCA_002140655.1_ASM214065v1	-	3H8_DIV0648
Prevotella sp. kh1p2	1761883	PRJEB17034	351196	FCB group	Bacteroidetes/Chlorobi group	3.28106	53.2	-	FOHY01	40	2644	2529	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487825	GCA_900111525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/525/GCA_900111525.1_IMG-taxon_2606217815_annotated_assembly	-	KH1P2
Mycobacterium sp. GA-2617	1772272	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.63981	66.8	-	LQII01	67	5448	5284	1/6/16	4/11/17	Contig	JCVI	SAMN04349489	GCA_001499825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/825/GCA_001499825.1_ASM149982v1	-	GA-2617
Streptococcus sp. HMSC072D03	1739381	PRJNA300031	300031	Terrabacteria group	Firmicutes	2.24209	39.5	-	LWQK01	97	2079	1947	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480045	GCA_001812855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/855/GCA_001812855.1_ASM181285v1	-	HMSC072D03
Bradyrhizobium sp. LTSP857	1619231	PRJNA275239	275239	Proteobacteria	Alphaproteobacteria	8.42608	63.3	-	JYMS01	50	7947	7719	3/3/15	4/10/17	Scaffold	University of British Columbia	SAMN03340243	GCA_000938285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/285/GCA_000938285.1_ASM93828v1	-	LTSP857
Arthrobacter sp. Leaf137	1736271	PRJNA297956	297956	Terrabacteria group	Actinobacteria	4.37555	66.2	-	LMOI01	24	4026	3893	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151651	GCA_001423525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/525/GCA_001423525.1_Leaf137	26633631	Leaf137
Corynebacterium sp. HMSC071F07	1715203	PRJNA296332	296332	Terrabacteria group	Actinobacteria	2.57488	59.1	-	LTIB01	61	2457	2209	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477576	GCA_001810285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/285/GCA_001810285.1_ASM181028v1	-	HMSC071F07
Staphylococcus sp. HMSC065C09	1739366	PRJNA300016	300016	Terrabacteria group	Firmicutes	2.33601	32.5	-	LWQM01	85	2304	2166	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480030	GCA_001812535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/535/GCA_001812535.1_ASM181253v1	-	HMSC065C09
Enterobacter sp. HMSC16D10	1581111	PRJNA269880	269880	Proteobacteria	Gammaproteobacteria	5.1231	55.7	-	LTZU01	114	4992	4743	10/17/16	4/20/17	Scaffold	The Genome Institute at Washington University	SAMN03287031	GCA_001807145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/145/GCA_001807145.1_ASM180714v1	-	HMSC16D10
Rhodococcus sp. 06-156-4C	2022513	PRJNA395383	395383	Terrabacteria group	Actinobacteria	6.29773	64.4	-	NOYK01	47	5857	5723	8/18/17	8/21/17	Contig	Oregon State University	SAMN07376383	GCA_002258395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/395/GCA_002258395.1_ASM225839v1	-	06-156-4C
Synechococcus sp. TMED187	1986595	PRJNA385857	385857	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.83999	59.6	-	NHIK01	148	1926	1849	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972041	GCA_002171995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/171/995/GCA_002171995.1_ASM217199v1	-	-
Sphingomonas sp. Leaf24	1735690	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.00192	66.4	-	LMKS01	22	3633	3515	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151588	GCA_001421605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/605/GCA_001421605.1_Leaf24	26633631	Leaf24
Clostridium sp. C8	1667357	PRJNA282450	282450	Terrabacteria group	Firmicutes	4.02096	28	-	LBMX01	125	3713	3558	5/20/15	4/18/17	Contig	Gwangju Institution of Science and Technology	SAMN03571283	GCA_001010885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/885/GCA_001010885.1_ASM101088v1	-	C8
Acinetobacter sp. NBRC 100985	1071390	PRJNA71037	71037	Proteobacteria	Gammaproteobacteria	3.5181	39	-	BAEB01	67	3371	3178	11/19/11	4/6/17	Contig	National Institute of Technology and Evaluation	SAMD00041787	GCA_000241225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/225/GCA_000241225.2_ASM24122v2	-	NBRC 100985
Bacillus sp. FJAT-25509	1712029	PRJNA294851	294851	Terrabacteria group	Firmicutes	5.11755	33	-	LJIZ01	42	4804	4650	10/30/15	4/11/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04038045	GCA_001420605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/605/GCA_001420605.1_ASM142060v1	-	FJAT-25509
Flavobacterium sp. SCGC AAA536-P05	1009712	PRJNA195658	195658	FCB group	Bacteroidetes/Chlorobi group	0.263384	38.3	-	ARQV01	55	-	-	4/26/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440971	GCA_000384835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/384/835/GCA_000384835.1_ASM38483v1	-	SCGC AAA536-P05
Streptomyces sp. CNB091	1169156	PRJNA178488	178488	Terrabacteria group	Actinobacteria	8.22895	71.6	-	ARJI01	50	7278	6893	4/22/13	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441673	GCA_000377965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/377/965/GCA_000377965.1_ASM37796v1	-	CNB091
Pseudomonas sp. URHB0015	1380376	PRJNA213764	213764	Proteobacteria	Gammaproteobacteria	6.2081	60.6	-	JHVR01	24	5726	5542	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02952997	GCA_000620245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/245/GCA_000620245.1_ASM62024v1	-	URHB0015
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.25845	66.9	-	LPBO01	64	7713	7349	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449377	GCA_001526905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/905/GCA_001526905.1_ASM152690v1	-	MSMB1824WGS
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.91046	64.2	-	FSOE01	10	4868	4733	12/14/16	3/21/17	Contig	SC	SAMEA2153565	GCA_900140055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/055/GCA_900140055.1_10665_2_60	-	511
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.09129	55.1	-	LDBN01	48	5035	4808	5/21/15	4/6/17	Contig	JCVI	SAMN03495950	GCA_001011515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/515/GCA_001011515.1_ASM101151v1	-	GN02694
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.92084	55.5	-	JZYP01	54	4824	4630	3/19/15	3/25/17	Contig	JCVI	SAMN03283657	GCA_000957225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/225/GCA_000957225.1_ASM95722v1	-	36801
Citrobacter freundii	546	PRJNA252011	252011	Proteobacteria	Gammaproteobacteria	5.3303	51.5	-	JRTD01	163	5337	5077	10/26/15	4/4/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02872774	GCA_001413165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/165/GCA_001413165.1_ASM141316v1	25501822	RU2 LB34
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	3.91084	38.8	-	MDHP01	88	3791	3627	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022842	GCA_001706045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/045/GCA_001706045.1_ASM170604v1	-	St-11469-92
Streptococcus agalactiae	1311	PRJNA258321	258321	Terrabacteria group	Firmicutes	2.06472	35.7	chromosome:NZ_CP011325.1/CP011325.1	-	1	2120	1968	8/3/15	3/17/17	Complete Genome	GUANGXI ACADEMY OF FISHERY SCIENCES	SAMN02992126	GCA_001190805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/190/805/GCA_001190805.1_ASM119080v1	26537657	HN016
Pseudoalteromonas sp. TAE79	1938597	PRJNA202434	202434	Proteobacteria	Gammaproteobacteria	5.04509	39.3	-	AUTL01	298	4812	4215	11/20/13	4/2/17	Scaffold	University of Florence	SAMN02260209	GCA_000498015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/015/GCA_000498015.1_TAE79	28095778	TAE79
Klebsiella variicola	244366	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	6.06836	57	-	NGZG01	171	6181	5785	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06909163	GCA_002164805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/805/GCA_002164805.1_ASM216480v1	-	WCHKP19
Acinetobacter nosocomialis	106654	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.07996	38.4	-	DGCU01	179	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452014	GCA_002385085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/085/GCA_002385085.1_ASM238508v1	28894102	-
Streptococcus oralis	1303	PRJNA302716	302716	Terrabacteria group	Firmicutes	1.94887	41.1	-	LWCG01	36	1978	1852	4/29/16	4/5/17	Scaffold	TAILORED-Treatment project	SAMN04625404	GCA_001639395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/395/GCA_001639395.1_ASM163939v1	-	CCUG 62648
Lactobacillus paracasei	1597	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.05933	46.3	-	MKFZ01	86	3192	2950	2/1/17	4/6/17	Scaffold	ETH Zurich	SAMN05717749	GCA_001982085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/085/GCA_001982085.1_ASM198208v1	-	RI-194
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.73798	47.6	-	MDZR01	80	3439	3268	11/17/16	4/5/17	Contig	The University of Queensland	SAMN04320393	GCA_001883755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/755/GCA_001883755.1_ASM188375v1	-	91/4311 A1
Flavobacterium psychrophilum	96345	PRJNA335405	335405	FCB group	Bacteroidetes/Chlorobi group	2.7369	32.4	-	MTCB01	20	2496	2414	5/19/17	5/24/17	Scaffold	"Ontario Veterinary College, University of Guelph"	SAMN05504832	GCA_002150245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/245/GCA_002150245.1_ASM215024v1	-	FPG1W08
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.75114	67.1	-	LPBL01	160	6979	6564	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449374	GCA_001526635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/635/GCA_001526635.1_ASM152663v1	-	MSMB1811WGS
Aeromonas hydrophila	644	PRJNA381330	381330	Proteobacteria	Gammaproteobacteria	4.96331	61	-	NBOV01	34	4584	4399	4/28/17	5/3/17	Scaffold	Zhejiang Institute of Freshwater Fisheries	SAMN06674713	GCA_002114075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/075/GCA_002114075.1_ASM211407v1	-	BSK-10
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.12618	63.2	-	DBRZ01	36	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452912	GCA_002306155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/155/GCA_002306155.1_ASM230615v1	28894102	-
Vibrio sp. V05_P4A8T149	1938660	PRJNA361511	361511	Proteobacteria	Gammaproteobacteria	3.72259	44.8	-	NDIA01	313	3514	3256	8/4/17	8/6/17	Scaffold	Instituto de ecologia	SAMN06251401	GCA_002241155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/155/GCA_002241155.1_ASM224115v1	-	V05_P4A8T149
Sulfolobus acidocaldarius	2285	PRJNA304349	304349	TACK group	Crenarchaeota	2.22058	36.7	chromosome:CP013694.1	-	1	2301	2161	12/23/15	12/23/15	Chromosome	University of Illinois at Urbana-Champaign	SAMN04305143	GCA_001481595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/595/GCA_001481595.1_ASM148159v1	-	GG12-C01-09
Mycobacterium abscessus 6G-0125-S	1001741	PRJNA65213	65213	Terrabacteria group	Actinobacteria	5.32882	64.1	-	AKUF01	8	5420	5305	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00672659	GCA_000270865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/865/GCA_000270865.1_ASM27086v1	-	6G-0125-S
Lactobacillus salivarius	1624	PRJNA357984	357984	Terrabacteria group	Firmicutes	1.97182	32.6	-	NBEM01	51	1965	1852	4/5/17	4/8/17	Scaffold	University College Cork	SAMN06163261	GCA_002079585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/585/GCA_002079585.1_ASM207958v1	-	DSM 20554
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.5441	56.8	-	MRXF01	194	4477	4194	3/31/17	4/6/17	Contig	FDA/CFSAN	SAMN06100270	GCA_002075555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/555/GCA_002075555.1_ASM207555v1	-	MOD1-Anth48g
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.20986	54.9	-	FKZS01	60	6038	5760	5/19/16	2/21/17	Scaffold	SC	SAMEA2273608	GCA_900083705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/705/GCA_900083705.1_12045_6_72	-	2880STDY5682532
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.94478	55.2	-	LDEN01	112	4916	4652	6/10/15	3/26/17	Scaffold	University of Minnesota	SAMN03333169	GCA_001025055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/055/GCA_001025055.1_ASM102505v1	26438492	MNCRE79
Proteus mirabilis	584	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.91663	38.7	-	JVEH01	127	3557	3443	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197703	GCA_001063575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/575/GCA_001063575.1_ASM106357v1	26230489	51_PMIR
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.51705	32.7	-	CUEH01	80	2512	2382	3/31/15	3/26/17	Contig	SC	SAMEA1035091	GCA_001233365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/365/GCA_001233365.1_7067_4_72	-	51-52
Propionibacterium acnes HL046PA2	765095	PRJNA49223	49223	Terrabacteria group	Actinobacteria	2.5096	60.1	-	ADYV01	59	2528	2376	7/30/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189221	GCA_000144875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/875/GCA_000144875.1_ASM14487v1	-	HL046PA2
Burkholderia sp. ABCPW 11	1637859	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.24791	66.9	-	LOVM01	102	6801	6355	1/21/16	8/28/17	Contig	Northern Arizona University	SAMN03449203	GCA_001523445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/445/GCA_001523445.1_ASM152344v1	-	ABCPW11
Campylobacter coli 317/04	887300	PRJNA52737	52737	Proteobacteria	delta/epsilon subdivisions	1.7478	31	-	AINJ01	132	1820	1684	3/16/12	3/18/17	Contig	Cornell University	SAMN02428940	GCA_000253955.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/955/GCA_000253955.3_ASM25395v3	-	317/04
Mannheimia haemolytica	75985	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.65458	41	-	LQFD01	115	2749	2584	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366551	GCA_001930625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/625/GCA_001930625.1_ASM193062v1	-	2930MH
Lactobacillus plantarum EGD-AQ4	1382301	PRJNA214308	214308	Terrabacteria group	Firmicutes	3.41463	46.5	-	AVAQ01	51	3103	2933	8/23/13	3/27/17	Contig	National Environmental Engineering Research Institute-CSIR	SAMN02469688	GCA_000463075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/075/GCA_000463075.2_GC_Assembler	24407637	EGD-AQ4
Serratia marcescens	615	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.13641	59.7	-	JTBU01	4	4842	4490	11/14/14	7/6/17	Contig	US Food and Drug Administration 	SAMN02934511	GCA_000783975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/975/GCA_000783975.1_ASM78397v1	-	FDAARGOS_62
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.08538	41.6	-	JJQR01	175	3516	3299	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708959	GCA_000980055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/055/GCA_000980055.1_gtlEnvA5udCFS	25756680	1.H.M.1A.1
Yersinia enterocolitica	630	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.52869	47.3	-	NBTD01	1	4251	3855	4/10/17	4/13/17	Contig	US Food and Drug Administration 	SAMN04875563	GCA_002082275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/275/GCA_002082275.1_ASM208227v1	-	FDAARGOS_226
Mycoplasma pneumoniae	2104	PRJNA267612	267612	Terrabacteria group	Tenericutes	0.803244	39.8	-	JTHD01	15	791	695	12/2/15	4/4/17	Scaffold	Capital Institute of Pediatrics	SAMN03142260	GCA_001455745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/745/GCA_001455745.1_ASM145574v1	-	CIP12355
Corynebacterium diphtheriae	1717	PRJNA357965	357965	Terrabacteria group	Actinobacteria	2.46435	53.5	-	MSBR01	50	2391	2062	1/4/17	4/10/17	Contig	"CMC, Vellore"	SAMN06162630	GCA_001935935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/935/935/GCA_001935935.1_ASM193593v1	-	CMCER388
Bordetella bronchiseptica MBORD785	1331235	PRJNA202147	202147	Proteobacteria	Betaproteobacteria	5.15203	68.2	-	JGXU01	102	4901	4762	5/12/14	4/2/17	Contig	JCVI	SAMN02231428	GCA_000690495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/495/GCA_000690495.1_gbb39v01	25908122	MBORD785
Streptococcus agalactiae	1311	PRJNA258310	258310	Terrabacteria group	Firmicutes	2.14742	35.7	chromosome:NZ_CP011329.1/CP011329.1	-	1	2224	2054	8/3/15	3/17/17	Complete Genome	GUANGXI ACADEMY OF FISHERY SCIENCES	SAMN02991570	GCA_001190885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/190/885/GCA_001190885.1_ASM119088v1	26430031	H002
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31325	57.2358	chromosome 1:NZ_CP018520.1/CP018520.1; chromosome 2:NZ_CP018521.1/CP018521.1	-	2	3374	3147	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932968	GCA_002192035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/035/GCA_002192035.1_ASM219203v1	28388689	BwIM_SYR_10
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.86603	46.7	-	JTHR01	83	2929	2718	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196640	GCA_001656535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/535/GCA_001656535.1_ASM165653v1	-	Lrh8
Pasteurella multocida subsp. multocida	44283	PRJNA244088	244088	Proteobacteria	Gammaproteobacteria	2.35827	40.3	-	JQEB01	52	2236	2154	6/15/15	4/3/17	Scaffold	Murdoch University	SAMN02721577	GCA_001028205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/205/GCA_001028205.1_ASM102820v1	26151935	Faisal
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15976	41.1	-	CWAE01	73	2104	1931	6/24/15	3/26/17	Contig	SC	SAMEA1032807	GCA_001175925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/925/GCA_001175925.1_6903_3_31	-	EQUI0080
Stenotrophomonas maltophilia	40324	PRJNA295129	295129	Proteobacteria	Gammaproteobacteria	4.68804	66.4	-	LJJH01	202	4300	4125	9/22/15	9/24/15	Contig	Universitat Autonoma de Barcelona	SAMN04041569	GCA_001297005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/005/GCA_001297005.1_SmOC94scaf_imr500	-	OC194
Elizabethkingia miricola	172045	PRJNA277897	277897	FCB group	Bacteroidetes/Chlorobi group	4.24252	35.7	chromosome:NZ_CP011059.1/CP011059.1	-	1	3888	3728	3/17/15	4/3/17	Complete Genome	Kookmin University	SAMN03398457	GCA_000955665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/955/665/GCA_000955665.1_ASM95566v1	26450743	BM10
Enterococcus faecium R496	1134836	PRJNA82061	82061	Terrabacteria group	Firmicutes	3.05381	37.5	-	AMAH01	242	3184	3026	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299511	GCA_000294915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/915/GCA_000294915.2_ASM29491v2	-	R496
Neisseria gonorrhoeae SK6987	1352529	PRJNA209319	209319	Proteobacteria	Betaproteobacteria	2.06394	52.7	-	ATPG01	435	2438	2053	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02338784	GCA_001026165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/165/GCA_001026165.1_ASM102616v1	-	SK6987
Streptococcus mutans TCI-249	1074173	PRJNA72087	72087	Terrabacteria group	Firmicutes	1.87941	36.8	-	AGMA01	98	1909	1790	10/6/11	3/22/17	Contig	JCVI	SAMN02436437	GCA_000229705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/705/GCA_000229705.2_SMUT7-NEX_2-249	-	TCI-249
Enterococcus faecalis HIP11704	565646	PRJNA32937	32937	Terrabacteria group	Firmicutes	3.20299	37.3	-	ACAN01	38	3286	3112	5/20/09	3/22/17	Scaffold	Broad Institute	SAMN02595259	GCA_000157335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/335/GCA_000157335.1_ASM15733v1	-	HIP11704
Brucella suis 019	1171378	PRJNA157955	157955	Proteobacteria	Alphaproteobacteria	3.29911	57.1	-	ANOZ01	30	-	-	1/9/13	4/5/16	Scaffold	Shihezi University	SAMN00847564	GCA_000331635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/635/GCA_000331635.1_Brucella_019	26821047	19
Clostridium botulinum Af84	1248417	PRJNA178523	178523	Terrabacteria group	Firmicutes	4.08608	27.9434	plasmid pCLQ:NZ_AOSX01000021.1/AOSX01000021.1	AOSX01	43	4023	3754	7/24/13	3/25/17	Contig	Los Alamos National Laboratory	SAMN02470269	GCA_000439815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/815/GCA_000439815.2_ASM43981v2	23637798	Af84
Lactococcus lactis subsp. cremoris KW2	1295826	PRJNA189982	189982	Terrabacteria group	Firmicutes	2.42705	35.7	chromosome:NC_022369.1/CP004884.1	-	1	2364	2219	9/16/13	4/1/17	Complete Genome	"AgResearch, Grasslands Research Institute"	SAMN02602975	GCA_000468955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/955/GCA_000468955.1_ASM46895v1	24009606	KW2
Amphibacillus xylanus NBRC 15112	698758	PRJNA42371	42371	Terrabacteria group	Firmicutes	2.56949	35.7	chromosome:NC_018704.1/AP012050.1	-	1	2455	2330	10/2/12	4/8/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00061112	GCA_000307165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/165/GCA_000307165.1_ASM30716v1	-	NBRC 15112
Vibrio parahaemolyticus	670	PRJNA275536	275536	Proteobacteria	Gammaproteobacteria	5.09136	45.3	-	JYJT01	197	4841	4555	5/12/15	3/17/17	Scaffold	Health Canada	SAMN03349610	GCA_001006195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/195/GCA_001006195.1_ASM100619v1	-	Oct-55
Streptococcus mitis	28037	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.8966	40.3	-	NCVM01	27	1914	1769	4/18/17	4/21/17	Scaffold	Slagelse Hospital	SAMN06705596	GCA_002096935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/935/GCA_002096935.1_ASM209693v1	27325438	B_5756_13
Oenococcus oeni S161	1428440	PRJNA229730	229730	Terrabacteria group	Firmicutes	1.78953	37.8	-	AZLN01	35	1822	1677	10/1/14	3/24/17	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02904296	GCA_000762245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/245/GCA_000762245.1_Oeoe_S161_1.0	24901216	S161
Xanthomonas oryzae pv. oryzae	64187	PRJNA269417	269417	Proteobacteria	Gammaproteobacteria	4.35459	63.9	-	JXEN01	414	4374	3519	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252537	GCA_001927725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/725/GCA_001927725.1_ASM192772v1	-	DXO-50
Campylobacter fetus subsp. fetus	32019	PRJEB8721	292173	Proteobacteria	delta/epsilon subdivisions	1.81035	33.9	-	FAUU01	18	1890	1769	11/29/15	4/4/17	Scaffold	SC	SAMEA3310295	GCA_001486885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/486/885/GCA_001486885.1_17150_1_82	-	006A-0178
Xanthomonas citri subsp. citri	611301	PRJEB7157	306114	Proteobacteria	Gammaproteobacteria	5.41675	64.6	-	CCWD01	87	5163	5088	12/16/15	12/16/15	Scaffold	Genoscope CEA	SAMEA2752209	GCA_001492615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/615/GCA_001492615.1_ASX_P_PRJEB7157_v1	-	-
Brucella abortus 63/138	1169208	PRJNA173524	173524	Proteobacteria	Alphaproteobacteria	3.29745	57.2	-	AQIV01	5	3389	3157	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00839721	GCA_000370005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/005/GCA_000370005.1_Bruc_abor_63_138_V1	-	63/138
Francisella tularensis	263	PRJNA244560	244560	Proteobacteria	Gammaproteobacteria	1.86629	32.3	-	JOOU01	1	1916	1641	8/19/14	4/2/17	Scaffold	Los Alamos National Laboratory	SAMN02870034	GCA_000742155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/155/GCA_000742155.1_ASM74215v1	25291764	FTU
Shigella boydii	621	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.97057	50.6	-	NIYW01	173	5227	4744	9/12/17	9/14/17	Contig	JCVI	SAMN07203019	GCA_002290405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/405/GCA_002290405.1_ASM229040v1	-	ESBL-A07-8-2
Clostridioides difficile	1496	PRJNA264745	264745	Terrabacteria group	Firmicutes	4.15683	28.6	-	JXBS01	44	3864	3725	1/26/15	3/16/17	Scaffold	Universidad de Costa Rica	SAMN03275226	GCA_000828245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/245/GCA_000828245.1_ASM82824v1	25653402	LIBA-5784
Vibrio cholerae HC-02A1	991948	PRJNA63903	63903	Proteobacteria	Gammaproteobacteria	3.94955	47.8	-	AFOT01	168	3744	3521	7/26/11	3/22/17	Scaffold	Institute for Genome Sciences	SAMN00249590	GCA_000221445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/445/GCA_000221445.1_ASM22144v1	-	HC-02A1
Ralstonia solanacearum	305	PRJNA257008	257008	Proteobacteria	Betaproteobacteria	5.18378	66.7	-	LVKT01	124	4583	4360	8/2/16	4/5/17	Contig	µFORGE	SAMN04216071	GCA_001696855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/855/GCA_001696855.1_RSOL002-SEQ-1-ASM-1	-	UW24
Bacillus thuringiensis IBL 4222	527020	PRJNA29735	29735	Terrabacteria group	Firmicutes	6.61243	34.8501	chromosome:NZ_CM000759.1/CM000759.1	ACNL01	1	13877	13258	4/30/09	5/18/17	Chromosome	Naval Medical Research Center	SAMN00727641	GCA_000161735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/735/GCA_000161735.1_ASM16173v1	22645259	IBL 4222
Burkholderia mallei	13373	PRJNA257008	257008	Proteobacteria	Betaproteobacteria	5.00633	68.5	-	LUFQ01	251	5452	4885	4/4/16	4/5/17	Contig	µFORGE	SAMN04260157	GCA_001608345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/345/GCA_001608345.1_BMAL003-SEQ-2-ASM-1	-	Budapest
[Clostridium] clariflavum DSM 19732	720554	PRJNA72805	72805	Terrabacteria group	Firmicutes	4.89768	35.7	chromosome:NC_016627.1/CP003065.1	-	1	4162	3906	12/12/11	9/4/17	Complete Genome	JGI	SAMN02261428	GCA_000237085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/085/GCA_000237085.1_ASM23708v1	22675603	DSM 19732
Methanobacterium paludis	868131	PRJNA53561	53561	Euryarchaeota	Methanobacteria	2.54654	35.7	chromosome:NC_015574.1/CP002772.1	-	1	2445	2367	5/24/11	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713630	GCA_000214725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/725/GCA_000214725.1_ASM21472v1	24449792	SWAN1
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.02929	67.1	-	MUQX01	192	7703	7190	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001834	GCA_001991385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/385/GCA_001991385.1_ASM199138v1	-	VC14748
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.06723	38.7	-	NGPA01	121	2010	1846	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848404	GCA_002253665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/665/GCA_002253665.1_ASM225366v1	-	609l
Bacteroides fragilis str. 1007-1-F #9	1339294	PRJNA206137	206137	FCB group	Bacteroidetes/Chlorobi group	5.52123	43.2	-	JGEC01	66	5006	4694	3/20/14	4/18/17	Contig	IGS	SAMN02314433	GCA_000598885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/885/GCA_000598885.1_ASM59888v1	-	1007-1-F #9
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.779	50.7	-	CXNC01	411	5374	4597	7/16/15	2/24/17	Contig	SC	SAMEA2055699	GCA_001258195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/195/GCA_001258195.1_9870_6_4	-	143099
Bartonella clarridgeiae 73	696125	PRJEA42109	42109	Proteobacteria	Alphaproteobacteria	1.52274	35.7	chromosome:NC_014932.1/FN645454.1	-	1	1293	1191	1/17/11	4/7/17	Complete Genome	"Focal area Infection Biology, Biozentrum, University of Basel, Switzerland"	SAMEA2272739	GCA_000253015.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/015/GCA_000253015.1_ASM25301v1	21347280	73
Bacillus licheniformis	1402	PRJNA270588	270588	Terrabacteria group	Firmicutes	4.52134	45.4	-	LQYK01	82	4761	4526	3/11/16	4/5/17	Scaffold	University of Groningen	SAMN03267275	GCA_001587195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/195/GCA_001587195.1_B4092	27174261	B4092
Vibrio vulnificus	672	PRJNA281153	281153	Proteobacteria	Gammaproteobacteria	4.90417	46.7	-	MVKY01	176	4621	4387	5/19/17	5/24/17	Contig	"Technische Universitaet Dresden, Medical Faculty 'Carl Gustav Carus'"	SAMN03483332	GCA_002150885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/885/GCA_002150885.1_ASM215088v1	-	VN-0208
Pseudomonas syringae ICMP 18806	1104683	PRJNA74973	74973	Proteobacteria	Gammaproteobacteria	6.25746	58.7	-	ANJF01	284	5915	5453	3/5/13	5/19/17	Contig	University of Otago	SAMN02471923	GCA_000344415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/415/GCA_000344415.1_ICMP18806v1.0	23555547	ICMP 18806
Streptococcus suis 89-3576-3	1214171	PRJNA171432	171432	Terrabacteria group	Firmicutes	2.12613	41.3	-	ALLK01	69	2137	2009	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469529	GCA_000440635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/635/GCA_000440635.1_version1	-	89-3576-3
Streptococcus agalactiae GBS12	1333566	PRJNA203050	203050	Terrabacteria group	Firmicutes	2.04807	35.3	-	ATOZ01	66	2120	1994	7/3/13	3/15/17	Scaffold	The Genome Institute	SAMN02436767	GCA_000419215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/215/GCA_000419215.1_S_agalactiaeGBS12-1.0	-	GBS12
Ignisphaera aggregans DSM 17230	583356	PRJNA33361	33361	TACK group	Crenarchaeota	1.87595	35.7	chromosome:CP002098.1	-	1	2039	1930	8/24/10	1/2/14	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00016987	GCA_000145985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/985/GCA_000145985.1_ASM14598v1	-	DSM 17230
Lactococcus lactis subsp. cremoris NZ9000	746361	PRJNA46623	46623	Terrabacteria group	Firmicutes	2.53029	35.7	chromosome:NC_017949.1/CP002094.1	-	1	2604	2363	7/2/10	3/30/17	Complete Genome	Department of Biochemistry - University of Groningen (The Netherlands)	SAMN02603175	GCA_000143205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/143/205/GCA_000143205.1_ASM14320v1	20639323	NZ9000
Bifidobacterium longum subsp. longum	1679	PRJDB4597	325619	Terrabacteria group	Actinobacteria	2.37271	60.1	-	BCYM01	97	2099	1891	6/10/16	4/5/17	Contig	Yakult Central Institute	SAMD00047623	GCA_001686245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/245/GCA_001686245.1_ASM168624v1	27340092	LO-K29b
Shigella flexneri	623	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.56583	51	-	JWSL01	8	4976	4027	12/24/14	8/8/17	Contig	US Food and Drug Administration 	SAMN03255439	GCA_001188055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/055/GCA_001188055.1_ASM118805v1	-	CFSAN027317
Bacillus anthracis str. A1055	280355	PRJNA10795	10795	Terrabacteria group	Firmicutes	5.37062	35.3	-	AAEO01	42	5977	5579	6/3/04	5/18/17	Scaffold	J. Craig Venter Institute	SAMN02435882	GCA_000167255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/255/GCA_000167255.1_ASM16725v1	-	A1055
Pseudomonas putida	303	PRJNA318797	318797	Proteobacteria	Gammaproteobacteria	5.7608	62.4	-	LWMA01	26	5327	5070	9/30/16	4/5/17	Contig	Instituto Agronomico - IAC - Campinas - SP - Brasil	SAMN04867884	GCA_001750465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/465/GCA_001750465.1_ASM175046v1	-	IAC-RBcr5
Leptospira interrogans str. FPW1039	1193040	PRJNA167242	167242	Spirochaetes	Spirochaetia	5.11336	35	-	AKWR02	264	4761	4168	10/17/12	8/8/17	Contig	J. Craig Venter Institute	SAMN02436495	GCA_000306495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/495/GCA_000306495.2_gls454079v02	-	FPW1039
Staphylothermus marinus F1	399550	PRJNA17449	17449	TACK group	Crenarchaeota	1.57048	35.7	chromosome:NC_009033.1/CP000575.1	-	1	1662	1598	2/21/07	8/21/15	Complete Genome	US DOE Joint Genome Institute	SAMN02598390	GCA_000015945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/945/GCA_000015945.1_ASM1594v1	21304655	F1
Lactococcus lactis subsp. cremoris MG1363	416870	PRJNA18797	18797	Terrabacteria group	Firmicutes	2.52948	35.7	chromosome:NC_009004.1/AM406671.1	-	1	2602	2359	1/31/07	3/29/17	Complete Genome	MG1363 Sequencing Consortium	SAMEA3138204	GCA_000009425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/425/GCA_000009425.1_ASM942v1	17307855	MG1363
Oceanobacillus iheyensis HTE831	221109	PRJNA284	284	Terrabacteria group	Firmicutes	3.63053	35.7	chromosome:NC_004193.1/BA000028.3	-	1	3604	3464	9/18/02	4/6/17	Complete Genome	JAMSTEC	SAMD00061101	GCA_000011245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/245/GCA_000011245.1_ASM1124v1	"1,175,081,812,235,370"	HTE831
Streptococcus pneumoniae PNI0199	1159098	PRJNA89199	89199	Terrabacteria group	Firmicutes	2.04994	39.7	-	AKRI01	143	2294	2034	1/29/13	3/9/17	Scaffold	Washington University	SAMN02299531	GCA_000334795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/795/GCA_000334795.1_ASM33479v1	-	PNI0199
Calditerrivibrio nitroreducens DSM 19672	768670	PRJNA49523	49523	Deferribacteres	Deferribacteres	2.21655	35.6755	chromosome:NC_014758.1/CP002347.1; plasmid pCALNI01:NC_014749.1/CP002348.1	-	2	2164	2099	11/30/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00102793	GCA_000183405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/405/GCA_000183405.1_ASM18340v1	21475587	DSM 19672
Anaerococcus prevotii DSM 20548	525919	PRJNA29533	29533	Terrabacteria group	Firmicutes	1.99863	35.6663	chromosome:NC_013171.1/CP001708.1; plasmid pAPRE01:NC_013164.1/CP001709.1	-	2	1884	1781	8/28/09	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00001908	GCA_000024105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/105/GCA_000024105.1_ASM2410v1	21304652	DSM 20548
Haemophilus influenzae	727	PRJNA285214	285214	Proteobacteria	Gammaproteobacteria	1.78072	37.9	-	LFDM01	21	1751	1633	7/21/15	3/26/17	Contig	University of Oklahoma Health Sciences Center	SAMN03702701	GCA_001184635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/635/GCA_001184635.1_ASM118463v1	26390432	HI1394
Mycobacterium bovis	1765	PRJEB7270	276993	Terrabacteria group	Actinobacteria	4.27521	65.6	-	CDHF01	49	4234	3958	3/3/15	4/3/17	Scaffold	ERA7	SAMEA2794672	GCA_000947875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/875/GCA_000947875.1_Genome_assembly_of_Mycobacterium_bovis_MB1	-	MB1
Mycobacterium avium subsp. hominissuis 100	1402966	PRJNA176036	176036	Terrabacteria group	Actinobacteria	5.49871	68.8	-	AUZT01	340	5392	4926	6/2/14	4/2/17	Contig	Oregon State University	SAMN02756838	GCA_000696735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/735/GCA_000696735.1_Maq_reference_guided_assembly	-	100
Clostridium perfringens	1502	PRJNA377666	377666	Terrabacteria group	Firmicutes	3.26398	28	-	NFHR01	47	2985	2801	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473746	GCA_002161405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/405/GCA_002161405.1_ASM216140v1	-	An68
Xanthomonas campestris pv. centellae	487858	PRJNA298605	298605	Proteobacteria	Gammaproteobacteria	5.15138	64.6	-	LOJR01	315	4721	4187	3/6/17	3/9/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN04145198	GCA_002019395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/395/GCA_002019395.1_ASM201939v1	-	LMG9044
Lactococcus lactis subsp. lactis	1360	PRJNA294255	294255	Terrabacteria group	Firmicutes	2.33604	34.8	-	LKLE01	60	2311	2174	12/4/15	4/4/17	Contig	Radboudumc	SAMN04023370	GCA_001456475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/475/GCA_001456475.1_ASM145647v1	-	K231
Bacillus cereus m1550	526969	PRJNA29649	29649	Terrabacteria group	Firmicutes	5.24649	35.1	chromosome:NZ_CM000722.1/CM000722.1	ACMA01	1	10881	10528	4/30/09	5/18/17	Chromosome	Naval Medical Research Center	SAMN00717296	GCA_000161035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/035/GCA_000161035.1_ASM16103v1	22645259	m1550
Staphylococcus epidermidis NIHLM023	979211	PRJNA62371	62371	Terrabacteria group	Firmicutes	2.54244	32	-	AKGU01	87	2506	2319	7/9/12	3/23/17	Contig	NISC - NIH Intramural Sequencing Center	SAMN00993233	GCA_000276305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/305/GCA_000276305.1_ASM27630v1	-	NIHLM023
Bacillus mycoides	1405	PRJNA243593	243593	Terrabacteria group	Firmicutes	5.6753	35.6237	chromosome:NZ_CP007626.1/CP007626.1; plasmid unnamed_1:NZ_CP007621.1/CP007621.1; plasmid unnamed_2:NZ_CP007622.1/CP007622.1; plasmid unnamed_3:NZ_CP007623.1/CP007623.1; plasmid unnamed_4:NZ_CP007624.1/CP007624.1; plasmid unnamed_5:NZ_CP007625.1/CP007625.1	-	6	5888	5395	8/21/14	4/2/17	Complete Genome	Los Alamos National Laboratory	SAMN03081542	GCA_000742855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/855/GCA_000742855.1_ASM74285v1	25301645	219298
Yersinia pestis subsp. microtus bv. Ulegeica	385969	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.63683	47.6	-	LIYO01	189	4345	3961	9/21/15	3/26/17	Scaffold	SRCAMB	SAMN03839870	GCA_001294835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/835/GCA_001294835.1_ASM129483v1	26634751	SCPM-O-B-6706
Pseudomonas fluorescens	294	PRJNA271924	271924	Proteobacteria	Gammaproteobacteria	6.63984	61	-	JXOE01	135	6069	5850	2/17/15	4/3/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03279759	GCA_000876175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/175/GCA_000876175.1_ASM87617v1	25814596	DSM 8569
Bacillus mycoides	1405	PRJNA238237	238237	Terrabacteria group	Firmicutes	5.67696	35.6192	chromosome:NZ_CP009651.1/CP009651.1; plasmid pBTZ_1:NZ_CP009650.1/CP009650.1; plasmid pBTZ_2:NZ_CP009649.1/CP009649.1; plasmid pBTZ_3:NZ_CP009648.1/CP009648.1; plasmid pBTZ_4:NZ_CP009647.1/CP009647.1; plasmid pBTZ_5:NZ_CP009645.1/CP009645.1; plasmid pBTZ_6:NZ_CP009646.1/CP009646.1	-	7	5994	5426	2/5/15	9/18/17	Complete Genome	Los Alamos National Laboratory	SAMN03107476	GCA_000832885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/885/GCA_000832885.1_ASM83288v1	25931591	BTZ
Streptococcus agalactiae	1311	PRJNA252450	252450	Terrabacteria group	Firmicutes	2.12137	35.6	chromosome:NZ_CP008813.1/CP008813.1	-	1	2189	2046	7/5/17	7/7/17	Complete Genome	GUANGXI ACADEMY OF FISHERY SCIENCES	SAMN02850626	GCA_002214425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/425/GCA_002214425.1_ASM221442v1	-	C001
Streptococcus agalactiae	1311	PRJNA293392	293392	Terrabacteria group	Firmicutes	2.16712	35.6	chromosome:NZ_CP021868.1/CP021868.1	-	1	2237	2073	6/16/17	6/21/17	Complete Genome	Singapore Streptococcus agalactiae working group	SAMN05384054	GCA_002197325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/325/GCA_002197325.1_ASM219732v1	28475781	SG-M8
Streptococcus agalactiae	1311	PRJNA293392	293392	Terrabacteria group	Firmicutes	2.10602	35.6	chromosome:NZ_CP021869.1/CP021869.1	-	1	2188	2007	6/16/17	6/21/17	Complete Genome	Singapore Streptococcus agalactiae working group	SAMN05384057	GCA_002197365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/365/GCA_002197365.1_ASM219736v1	28475781	SG-M6
Streptococcus sp. 'group B'	1319	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.17806	35.6	chromosome:CP020432.1	-	1	2255	1960	3/29/17	3/29/17	Complete Genome	US Food and Drug Administration 	SAMN04875566	GCA_002073795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/795/GCA_002073795.1_ASM207379v1	-	FDAARGOS_229
Elizabethkingia anophelis	1117645	PRJNA326741	326741	FCB group	Bacteroidetes/Chlorobi group	3.97428	35.6	chromosome:NZ_CP014340.1/CP014340.1	-	1	3632	3512	3/10/17	3/13/17	Complete Genome	CDC	SAMN04482309	GCA_002024825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/825/GCA_002024825.1_ASM202482v1	-	F3543
Pseudomonas fluorescens	294	PRJNA283446	283446	Proteobacteria	Gammaproteobacteria	4.83671	58.6	-	LCYU01	56	4481	4306	6/5/15	4/3/17	Contig	"University of Michigan, Ann Arbor"	SAMN03650287	GCA_001020625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/625/GCA_001020625.1_ASM102062v1	-	AU10414
Yersinia pestis subsp. microtus bv. Hissarica	385965	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.53108	47.6	-	LIYS01	209	4226	3839	9/21/15	3/26/17	Scaffold	SRCAMB	SAMN03839878	GCA_001294885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/885/GCA_001294885.1_ASM129488v1	26634751	SCPM-O-B-6304
Elizabethkingia anophelis	1117645	PRJNA326741	326741	FCB group	Bacteroidetes/Chlorobi group	3.98648	35.6	chromosome:NZ_CP016370.1/CP016370.1	-	1	3679	3564	3/6/17	3/8/17	Complete Genome	CDC	SAMN04254539	GCA_002022025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/025/GCA_002022025.1_ASM202202v1	-	422
Staphylococcus epidermidis NIHLM037	979210	PRJNA62369	62369	Terrabacteria group	Firmicutes	2.46936	32.1	-	AKGT01	68	2431	2246	7/9/12	3/23/17	Contig	NISC - NIH Intramural Sequencing Center	SAMN00993246	GCA_000276325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/325/GCA_000276325.1_ASM27632v1	-	NIHLM037
Bacillus cereus BDRD-ST24	526974	PRJNA29659	29659	Terrabacteria group	Firmicutes	5.43617	35.1	chromosome:NZ_CM000723.1/CM000723.1	ACMB01	1	11343	10925	4/30/09	5/18/17	Chromosome	Naval Medical Research Center	SAMN00727632	GCA_000161055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/055/GCA_000161055.1_ASM16105v1	22645259	BDRD-ST24
Lactococcus lactis subsp. lactis	1360	PRJNA294255	294255	Terrabacteria group	Firmicutes	2.36676	34.9	-	LKLG01	54	2359	2204	12/4/15	4/4/17	Contig	Radboudumc	SAMN04023372	GCA_001456495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/495/GCA_001456495.1_ASM145649v1	-	KF7
Xanthomonas campestris pv. musacearum NCPPB 4381	559737	PRJNA31215	31215	Proteobacteria	Gammaproteobacteria	4.7939	61.8	-	ACHT01	115	-	-	8/25/09	11/19/13	Scaffold	The Sainsbury Laboratory	SAMN00002877	GCA_000159815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/815/GCA_000159815.1_ASM15981v1	20695894	NCPPB 4381
Clostridium perfringens	1502	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.20716	28.1	-	JVYV01	95	2809	2754	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197169	GCA_001052445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/445/GCA_001052445.1_ASM105244v1	26230489	1207_CPER
Mycobacterium avium subsp. hominissuis 101	1402967	PRJNA176035	176035	Terrabacteria group	Actinobacteria	5.46524	69	-	AUZP01	156	5279	4926	6/2/14	4/2/17	Contig	Oregon State University	SAMN02756839	GCA_000696755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/755/GCA_000696755.1_MAV101_WGS_assembly	-	101
Mycobacterium bovis	1765	PRJEB7272	276994	Terrabacteria group	Actinobacteria	4.25979	65.5	-	CDHH01	94	4211	3931	3/3/15	4/3/17	Scaffold	ERA7	SAMEA2794682	GCA_000947895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/895/GCA_000947895.1_Assembly_of_the_genome_MB3	-	MB3
Haemophilus influenzae	727	PRJNA285213	285213	Proteobacteria	Gammaproteobacteria	1.81246	37.8	-	LFDN01	16	1799	1683	7/21/15	3/26/17	Contig	University of Oklahoma Health Sciences Center	SAMN03702700	GCA_001184645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/645/GCA_001184645.1_ASM118464v1	26390432	HI1388
Streptococcus agalactiae	1311	PRJNA307137	307137	Terrabacteria group	Firmicutes	2.09257	35.6	chromosome:NZ_CP013908.1/CP013908.1	-	1	2169	2008	1/4/17	3/21/17	Complete Genome	Institutes of Biology and Medical Sciences	SAMN04376007	GCA_001932715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/715/GCA_001932715.1_ASM193271v1	-	GBS-M002
Streptococcus agalactiae	1311	PRJNA293858	293858	Terrabacteria group	Firmicutes	2.17287	35.6	chromosome:NZ_CP012503.1/CP012503.1	-	1	2248	2078	8/25/16	3/20/17	Complete Genome	Public Health Ontario	SAMN04007152	GCA_001712835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/835/GCA_001712835.1_ASM171283v1	-	NGBS357
Streptococcus pneumoniae PNI0360	1159100	PRJNA89203	89203	Terrabacteria group	Firmicutes	2.04704	39.7	-	AKRJ01	157	2307	2030	1/29/13	3/9/17	Scaffold	Washington University	SAMN02299532	GCA_000334815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/815/GCA_000334815.1_ASM33481v1	-	PNI0360
Elizabethkingia anophelis FMS-007	1352940	PRJNA210135	210135	FCB group	Bacteroidetes/Chlorobi group	3.93897	35.6	chromosome:NZ_CP006576.1/CP006576.1	-	1	3593	3480	5/21/15	4/3/17	Complete Genome	Fudan University	SAMN03704061	GCA_001011675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/675/GCA_001011675.1_ASM101167v1	26112786	FMS-007
Staphylococcus hyicus	1284	PRJNA252807	252807	Terrabacteria group	Firmicutes	2.47213	35.6	chromosome:NZ_CP008747.1/CP008747.1	-	1	2367	2262	1/7/15	4/10/17	Complete Genome	University of Missouri - Columbia	SAMN02863110	GCA_000816085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/085/GCA_000816085.1_ASM81608v1	25700402	ATCC 11249
Streptococcus pyogenes STAB1102	1437008	PRJNA231786	231786	Terrabacteria group	Firmicutes	1.70944	38.6	chromosome:NZ_CP007023.1/CP007023.1	-	1	1714	1584	7/22/14	3/24/17	Chromosome	Service Bacteriologie CHU Pontchaillou	SAMN03081522	GCA_000732345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/345/GCA_000732345.1_ASM73234v1	-	STAB1102
Leptospira interrogans str. HAI1536	1193041	PRJNA167257	167257	Spirochaetes	Spirochaetia	4.69495	35.3	-	AKWD02	69	4274	3860	10/17/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436491	GCA_000306635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/635/GCA_000306635.2_gls454172v02	-	HAI1536
Pseudomonas putida	303	PRJNA344845	344845	Proteobacteria	Gammaproteobacteria	7.06425	63.4	-	MKZO01	79	6441	6228	1/10/17	5/30/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05846352	GCA_001941965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/965/GCA_001941965.1_ASM194196v1	-	GM4FR
Bacillus anthracis str. Vollum	261591	PRJNA10797	10797	Terrabacteria group	Firmicutes	5.48846	35.2	-	AAEP01	52	6106	5716	6/3/04	5/18/17	Scaffold	J. Craig Venter Institute	SAMN02435883	GCA_000167275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/275/GCA_000167275.1_ASM16727v1	-	Vollum
Shigella flexneri	623	PRJNA315925	315925	Proteobacteria	Gammaproteobacteria	4.81639	50.4	-	LVIO01	522	5573	4440	5/20/16	8/8/17	Contig	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04570182	GCA_001648935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/935/GCA_001648935.1_ASM164893v1	-	GX4s05
Bifidobacterium longum subsp. longum	1679	PRJNA348831	348831	Terrabacteria group	Actinobacteria	2.25318	59.9	-	MLZK01	40	1967	1712	12/8/16	4/10/17	Contig	University of Parma	SAMN05916052	GCA_001892965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/965/GCA_001892965.1_ASM189296v1	-	296B
Elizabethkingia anophelis NUHP1	1338011	PRJNA205476	205476	FCB group	Bacteroidetes/Chlorobi group	4.36983	35.6	chromosome:NZ_CP007547.1/CP007547.1	-	1	4039	3912	8/27/14	4/2/17	Complete Genome	SCELSE	SAMN02470988	GCA_000495935.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/935/GCA_000495935.2_ASM49593v2	"2,401,226,526,019,160"	NUHP1
Chryseobacterium sp. StRB126	878220	PRJDB3026	259182	FCB group	Bacteroidetes/Chlorobi group	5.50374	35.6	chromosome:NZ_AP014624.1/AP014624.1	-	1	4980	4810	8/21/14	4/17/17	Complete Genome	"Department of Material and Environmental Chemistry, Graduate School of Engineering, Utsunomiya University"	SAMD00018982	GCA_000829375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/375/GCA_000829375.1_ASM82937v1	25291777	StRB126
Streptococcus agalactiae GBS11	1333565	PRJNA203049	203049	Terrabacteria group	Firmicutes	2.07752	35.1	-	ATPA01	174	2167	2016	7/3/13	3/15/17	Scaffold	The Genome Institute	SAMN02436827	GCA_000419235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/235/GCA_000419235.1_S_agalactiaeGBS11-1.0	-	GBS11
Streptococcus suis 89-4109-1	1214172	PRJNA171433	171433	Terrabacteria group	Firmicutes	2.17673	39.9	-	ALLL01	76	2176	2024	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469553	GCA_000440655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/655/GCA_000440655.1_version1	-	89-4109-1
Pseudomonas syringae pv. actinidiae TP1	1104684	PRJNA74975	74975	Proteobacteria	Gammaproteobacteria	6.22031	58.5	-	ANJG01	472	5992	5476	3/5/13	5/19/17	Contig	University of Otago	SAMN02471924	GCA_000344435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/435/GCA_000344435.1_TP1_PSA1.0	23555547	TP1
Vibrio vulnificus	672	PRJNA355116	355116	Proteobacteria	Gammaproteobacteria	5.08992	46.5	-	NOJB01	136	4900	4592	8/22/17	8/24/17	Contig	FDA	SAMN06062368	GCA_002265325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/325/GCA_002265325.1_ASM226532v1	-	WAPHLVBRA00007
Bacillus licheniformis	1402	PRJNA270588	270588	Terrabacteria group	Firmicutes	4.29694	46.1	-	LQYL01	36	4490	4265	3/11/16	4/5/17	Scaffold	University of Groningen	SAMN03267273	GCA_001587285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/285/GCA_001587285.1_B4090	27174261	B4090_201601
Streptococcus agalactiae GD201008-001	1203670	PRJNA169338	169338	Terrabacteria group	Firmicutes	2.06311	35.6	chromosome:NC_018646.1/CP003810.1	-	1	2122	1967	9/24/12	3/15/17	Complete Genome	"College of Veterinary Medicine, Nanjing Agricultural  University"	SAMN02603155	GCA_000299135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/135/GCA_000299135.1_ASM29913v1	23144401	GD201008-001
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.56552	50.6	-	CXIK01	371	5077	4357	7/16/15	2/24/17	Contig	SC	SAMEA2003855	GCA_001258295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/295/GCA_001258295.1_8289_7_70	-	85002
Bacteroides fragilis str. 20793-3	1339279	PRJNA206110	206110	FCB group	Bacteroidetes/Chlorobi group	5.28207	43	-	JGEF01	148	4725	4389	3/20/14	4/2/17	Contig	IGS	SAMN02314420	GCA_000598905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/905/GCA_000598905.1_ASM59890v1	-	20793-3
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.14349	38.7	-	NGPC01	115	2172	1956	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848402	GCA_002253685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/685/GCA_002253685.1_ASM225368v1	-	609e
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.00995	67	-	MURA01	183	7599	7154	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001837	GCA_001991415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/415/GCA_001991415.1_ASM199141v1	-	VC3868
Streptococcus agalactiae A909	205921	PRJNA326	326	Terrabacteria group	Firmicutes	2.12784	35.6	chromosome:NC_007432.1/CP000114.1	-	1	2207	2040	9/29/05	3/15/17	Complete Genome	TIGR	SAMN02604011	GCA_000012705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/705/GCA_000012705.1_ASM1270v1	16172379	A909
Streptococcus agalactiae NEM316	211110	PRJNA334	334	Terrabacteria group	Firmicutes	2.21149	35.6	chromosome:NC_004368.1/AL732656.1	-	1	2273	2127	11/7/02	3/15/17	Complete Genome	Institut Pasteur	SAMEA3138330	GCA_000196055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/055/GCA_000196055.1_ASM19605v1	12354221	NEM316
Burkholderia mallei	13373	PRJNA257008	257008	Proteobacteria	Betaproteobacteria	5.44534	68.7	-	LUFP01	204	5829	5279	4/4/16	4/5/17	Contig	µFORGE	SAMN04260156	GCA_001608365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/365/GCA_001608365.1_BMAL004-SEQ-1-ASM-1	-	102
Bacillus thuringiensis DAR 81934	1257079	PRJNA179326	179326	Terrabacteria group	Firmicutes	5.9438	35.4355	chromosome chromosome:NZ_CM001804.1/CM001804.1	ANPK01	11	6196	5624	2/19/13	7/29/17	Chromosome	Black Box Bioinformatics	SAMN02469463	GCA_000342025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/025/GCA_000342025.1_BTHUDAR81934.1	23516227	DAR 81934
Ralstonia solanacearum	305	PRJNA257008	257008	Proteobacteria	Betaproteobacteria	5.26452	66.7	-	LVKS01	136	4657	4420	8/2/16	4/5/17	Contig	µFORGE	SAMN04216070	GCA_001696865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/865/GCA_001696865.1_RSOL001-SEQ-1-ASM-1	-	UW365
Vibrio cholerae BJG-01	991997	PRJNA64001	64001	Proteobacteria	Gammaproteobacteria	3.91087	47.6	-	AFOU01	238	3706	3489	7/26/11	3/22/17	Scaffold	Institute for Genome Sciences	SAMN00222974	GCA_000221465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/465/GCA_000221465.1_ASM22146v1	-	BJG-01
Clostridioides difficile	1496	PRJNA264745	264745	Terrabacteria group	Firmicutes	4.53955	29.1	-	JXBQ01	78	4352	4184	1/26/15	3/16/17	Scaffold	Universidad de Costa Rica	SAMN03275180	GCA_000828255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/255/GCA_000828255.1_ASM82825v1	25653402	LIBA-5719
Shigella boydii	621	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.72595	51	-	NIYT01	183	5093	4531	9/12/17	9/14/17	Contig	JCVI	SAMN07203023	GCA_002290435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/435/GCA_002290435.1_ASM229043v1	-	ESBL-T013
Francisella tularensis	263	PRJNA244553	244553	Proteobacteria	Gammaproteobacteria	1.85214	32.3	-	JOUF01	2	1906	1514	8/19/14	4/10/17	Scaffold	Los Alamos National Laboratory	SAMN02867633	GCA_000746455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/455/GCA_000746455.1_ASM74645v1	25291764	FAC
Brucella abortus 63/144	1169209	PRJNA173522	173522	Proteobacteria	Alphaproteobacteria	3.28409	57.2	-	AQIW01	4	3372	3156	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00839719	GCA_000370025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/025/GCA_000370025.1_Bruc_abor_63_144_V1	-	63/144
Xanthomonas citri subsp. citri	611301	PRJEB7152	306109	Proteobacteria	Gammaproteobacteria	5.31929	64.6	-	CCWL01	52	5008	4923	12/16/15	12/16/15	Scaffold	Genoscope CEA	SAMEA2752210	GCA_001494115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/115/GCA_001494115.1_ASX_Q_PRJEB7152_v1	-	-
Campylobacter fetus subsp. fetus	32019	PRJEB8721	292173	Proteobacteria	delta/epsilon subdivisions	1.78107	34.4	-	FAVF01	13	1840	1744	11/29/15	4/4/17	Scaffold	SC	SAMEA3310293	GCA_001486905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/486/905/GCA_001486905.1_17150_1_80	-	006A-0161
Xanthomonas oryzae pv. oryzae	64187	PRJNA269419	269419	Proteobacteria	Gammaproteobacteria	4.29325	63.9	-	JXEP01	450	4279	3474	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252515	GCA_001927765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/765/GCA_001927765.1_ASM192776v1	-	DXO-089
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.23526	38.1	-	MLKP01	573	2338	2016	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297003	GCA_001867355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/355/GCA_001867355.1_ASM186735v1	27118061	AWRIB1059
Streptococcus mitis	28037	PRJNA304333	304333	Terrabacteria group	Firmicutes	2.12255	40.1	-	LQOD01	85	2056	2021	3/2/16	3/24/16	Scaffold	University of Kaiserslautern	SAMN04325055	GCA_001579035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/035/GCA_001579035.1_ASM157903v1	-	DD26
Vibrio parahaemolyticus	670	PRJNA280160	280160	Proteobacteria	Gammaproteobacteria	5.06773	45.2	-	LATW01	51	4877	4646	4/24/15	3/26/17	Scaffold	Huazhong Agricultural University	SAMN03458146	GCA_001011015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/015/GCA_001011015.1_ASM101101v1	-	ATCC 17802
Streptococcus agalactiae 2603V/R	208435	PRJNA330	330	Terrabacteria group	Firmicutes	2.16027	35.6	chromosome:NC_004116.1/AE009948.1	-	1	2279	2127	8/28/02	8/3/16	Complete Genome	TIGR	SAMN02604013	GCA_000007265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/265/GCA_000007265.1_ASM726v1	12200547	2603V/R
Chryseobacterium sp. IHB B 17019	1721091	PRJNA303135	303135	FCB group	Bacteroidetes/Chlorobi group	4.07777	35.596	chromosome:NZ_CP013293.1/CP013293.1; plasmid pAR01:NZ_CP013294.1/CP013294.1	-	2	3781	3656	12/3/15	4/11/17	Complete Genome	CSIR-Institute of Himalayan Bioresource Technology	SAMN04286739	GCA_001456155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/155/GCA_001456155.1_ASM145615v1	-	IHB B 17019
Clostridium botulinum CDC54075	1435055	PRJNA231041	231041	Terrabacteria group	Firmicutes	4.25615	27.9	-	AZQW01	542	4313	3346	2/25/14	3/24/17	Contig	Centers for Disease Control and Prevention	SAMN02951880	GCA_000582375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/375/GCA_000582375.1_CDC54075.1	24632257	CDC54075
Brucella suis bv. 4 str. 40	520488	PRJNA230241	230241	Proteobacteria	Alphaproteobacteria	3.34785	57.1	-	AZBG02	218	3098	2641	5/1/14	10/21/14	Contig	Smi	SAMN02427354	GCA_000661995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/995/GCA_000661995.2_Bsuis2.0	25278518	40
Enterococcus faecalis JH1	565648	PRJNA32939	32939	Terrabacteria group	Firmicutes	3.0428	37.4	-	ACAP01	24	3063	2921	6/12/09	3/22/17	Scaffold	Broad Institute	SAMN02595260	GCA_000157375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/375/GCA_000157375.1_ASM15737v1	-	JH1
Streptococcus mutans TCI-256	1074175	PRJNA72089	72089	Terrabacteria group	Firmicutes	1.88111	36.8	-	AGMB01	110	1894	1781	10/6/11	3/22/17	Contig	JCVI	SAMN02436520	GCA_000229725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/725/GCA_000229725.2_SMUT7-NEX_4-256	-	TCI-256
Neisseria gonorrhoeae SK29344	1352514	PRJNA209375	209375	Proteobacteria	Betaproteobacteria	2.06972	52.7	-	ATPV01	461	2426	2045	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02338798	GCA_001026175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/175/GCA_001026175.1_ASM102617v1	-	SK29344
Enterococcus faecium R494	1134835	PRJNA82059	82059	Terrabacteria group	Firmicutes	2.84858	37.7	-	AMAI01	196	2934	2786	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299510	GCA_000294935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/935/GCA_000294935.2_ASM29493v2	-	R494
Chlamydia psittaci RD1	929557	PRJEA60445	60445	PVC group	Chlamydiae	1.17163	39.06	chromosome:FQ482149.1; plasmid pRD1:FQ482150.1	-	2	1009	951	12/9/10	2/27/15	Chromosome	Wellcome Trust Sanger insititute	SAMEA2272574	GCA_000211155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/211/155/GCA_000211155.1_ASM21115v1	-	RD1
Stenotrophomonas maltophilia	40324	PRJNA299446	299446	Proteobacteria	Gammaproteobacteria	3.50829	66	-	LLXS01	84	3228	3099	11/4/15	9/22/17	Contig	CSIR-Institute of Microbial Technology	SAMN04207798	GCA_001431585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/585/GCA_001431585.1_ASM143158v1	27014232	JCM 9942
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15056	41.1	-	CVXK01	73	2096	1922	6/24/15	3/26/17	Contig	SC	SAMEA1032810	GCA_001175965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/965/GCA_001175965.1_6817_1_56	-	EQUI0009
Pasteurella multocida subsp. multocida	44283	PRJNA244084	244084	Proteobacteria	Gammaproteobacteria	2.35282	40.4	-	JQEA01	44	2228	2149	6/15/15	4/3/17	Scaffold	Murdoch University	SAMN02721557	GCA_001028225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/225/GCA_001028225.1_ASM102822v1	26151935	ATTK
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.9339	46.6	-	JTHW01	94	3029	2811	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196642	GCA_001656545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/545/GCA_001656545.1_ASM165654v1	-	Lrh32
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31258	57.2358	chromosome 1:NZ_CP018522.1/CP018522.1; chromosome 2:NZ_CP018523.1/CP018523.1	-	2	3372	3143	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932964	GCA_002192055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/055/GCA_002192055.1_ASM219205v1	28388689	BwIM_SYR_14
Emticicia oligotrophica DSM 17448	929562	PRJNA60431	60431	FCB group	Bacteroidetes/Chlorobi group	5.22036	35.5843	chromosome:CP002961.1; plasmid pEMTOL01:CP002962.1; plasmid pEMTOL02:CP002963.1; plasmid pEMTOL03:CP002964.1; plasmid pEMTOL04:CP002965.1; plasmid pEMTOL05:CP002966.1	-	6	4365	4267	5/17/12	1/8/15	Complete Genome	DOE Joint Genome Institute	SAMN02232019	GCA_000263195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/195/GCA_000263195.1_ASM26319v1	-	DSM 17448
Bordetella bronchiseptica MBORD901	1331238	PRJNA202150	202150	Proteobacteria	Betaproteobacteria	5.09696	68.3	-	JGXX01	109	4882	4718	5/12/14	4/2/17	Contig	JCVI	SAMN02231424	GCA_000690515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/515/GCA_000690515.1_gbb42v01	25908122	MBORD901
Corynebacterium diphtheriae	1717	PRJNA358448	358448	Terrabacteria group	Actinobacteria	2.58362	53	-	MSGA01	395	2408	2092	1/5/17	4/10/17	Contig	"CMC, Vellore"	SAMN06174217	GCA_001937225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/225/GCA_001937225.1_ASM193722v1	-	WD45
Mycoplasma pneumoniae	2104	PRJNA267612	267612	Terrabacteria group	Tenericutes	0.800977	39.8	-	JTGY01	17	786	690	12/2/15	4/4/17	Scaffold	Capital Institute of Pediatrics	SAMN03142255	GCA_001455775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/775/GCA_001455775.1_ASM145577v1	-	CIP12357
Yersinia enterocolitica	630	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.61579	47.3	-	NBTE01	4	4341	3946	4/10/17	4/13/17	Contig	US Food and Drug Administration 	SAMN04875562	GCA_002083285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/285/GCA_002083285.1_ASM208328v1	-	FDAARGOS_225
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	3.9788	41.6	-	JJQW01	142	3434	3228	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708940	GCA_000980075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/075/GCA_000980075.1_gtlEnvA5udCFS	25756680	1.H.M.2.3
Serratia marcescens subsp. marcescens	211759	PRJNA286707	286707	Proteobacteria	Gammaproteobacteria	5.20166	59.5	-	LFJS01	20	4913	4747	7/10/15	3/26/17	Contig	University of Melbourne	SAMN03769462	GCA_001051865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/865/GCA_001051865.1_ASM105186v1	26337895	AH0650_Sm1
Lactobacillus plantarum AY01	1358413	PRJNA211934	211934	Terrabacteria group	Firmicutes	3.31597	43.7	-	AVAI01	169	3188	2999	9/20/13	3/24/17	Contig	Kunming University of Science and Technology	SAMN02250894	GCA_000469115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/115/GCA_000469115.1_Velvet_V1.2.03_of_the_Lactobacillus_plantarum_genome	24115537	AY01
Mannheimia haemolytica	75985	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.65765	41	-	LQFG01	114	2757	2594	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366554	GCA_001930685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/685/GCA_001930685.1_ASM193068v1	-	2969MH
Campylobacter coli 37/05	887301	PRJNA52739	52739	Proteobacteria	delta/epsilon subdivisions	1.71025	31.3	-	AINK01	122	1808	1704	3/16/12	3/15/17	Contig	Cornell University	SAMN02428973	GCA_000253975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/975/GCA_000253975.2_ASM25397v2	-	37/05
Burkholderia sp. BDU6	1385591	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.49809	66.3	-	LOWD01	122	6120	5531	1/21/16	4/11/17	Contig	Northern Arizona University	SAMN03449221	GCA_001523745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/745/GCA_001523745.1_ASM152374v1	-	BDU6
Propionibacterium acnes HL110PA4	765080	PRJNA49193	49193	Terrabacteria group	Actinobacteria	2.5127	60.1	-	ADYF01	56	2501	2277	8/4/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189250	GCA_000144895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/895/GCA_000144895.1_ASM14489v1	-	HL110PA4
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.33139	32.7	-	CUEZ01	42	2301	2166	3/31/15	3/26/17	Contig	SC	SAMEA1035057	GCA_001233565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/565/GCA_001233565.1_7067_4_89	-	CN1197
Proteus mirabilis	584	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.76148	38.5	-	JVOK01	185	3410	3319	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197440	GCA_001064105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/105/GCA_001064105.1_ASM106410v1	26230489	25_PMIR
Enterobacter cloacae	550	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.68311	55.3	-	LETA01	7	4579	4360	6/19/15	3/26/17	Scaffold	Broad Institute	SAMN03280176	GCA_001030145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/145/GCA_001030145.1_Ente_cloa_UCI86_V1	-	UCI86
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.05177	55.1	-	FKZV01	37	5838	5599	5/19/16	2/21/17	Scaffold	SC	SAMEA2273617	GCA_900083715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/715/GCA_900083715.1_12045_6_80	-	2880STDY5682541
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.4674	56.9	-	MRXJ01	34	4302	4108	3/31/17	4/6/17	Contig	FDA/CFSAN	SAMN06124515	GCA_002075575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/575/GCA_002075575.1_ASM207557v1	-	MOD1-S1765
Lactobacillus salivarius	1624	PRJNA357984	357984	Terrabacteria group	Firmicutes	1.88863	32.7	-	NBEN01	20	1874	1756	4/5/17	4/8/17	Scaffold	University College Cork	SAMN06163260	GCA_002079595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/595/GCA_002079595.1_ASM207959v1	-	DSM 20492
Mycobacterium abscessus subsp. bolletii 1S-153-0915	1001706	PRJNA65143	65143	Terrabacteria group	Actinobacteria	4.89449	64.2	-	AKUK01	13	4906	4788	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00714442	GCA_000270885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/885/GCA_000270885.1_ASM27088v1	-	1S-153-0915
Vibrio sp. V07_P2A8T137	1938662	PRJNA361511	361511	Proteobacteria	Gammaproteobacteria	3.6247	45	-	NDIC01	436	3335	3139	8/4/17	8/6/17	Scaffold	Instituto de ecologia	SAMN06251403	GCA_002241165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/165/GCA_002241165.1_ASM224116v1	-	V07_P2A8T137
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.91309	60.1	-	DBUC01	23	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06451776	GCA_002307775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/775/GCA_002307775.1_ASM230777v1	28894102	-
Aeromonas hydrophila	644	PRJNA381370	381370	Proteobacteria	Gammaproteobacteria	4.93286	61.2	-	NBWY01	32	4564	4354	4/28/17	5/3/17	Scaffold	Zhejiang Institute of Freshwater Fisheries	SAMN06675356	GCA_002115515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/515/GCA_002115515.1_ASM211551v1	-	TPS-30
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.4713	67.1	-	LPBN01	223	6773	6315	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449376	GCA_001526645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/645/GCA_001526645.1_ASM152664v1	-	MSMB1817WGS
Flavobacterium psychrophilum	96345	PRJNA354433	354433	FCB group	Bacteroidetes/Chlorobi group	2.63805	32.5	-	MUHE01	83	2390	2284	7/12/17	7/14/17	Scaffold	FDA	SAMN06049063	GCA_002217405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/405/GCA_002217405.1_ASM221740v1	-	ATCC 49418
Yersinia ruckeri	29486	PRJNA310959	310959	Proteobacteria	Gammaproteobacteria	3.73626	47.6	-	MDZP01	85	3441	3274	11/17/16	4/5/17	Contig	The University of Queensland	SAMN04320391	GCA_001883765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/765/GCA_001883765.1_ASM188376v1	-	90/0961-C9
Lactobacillus paracasei	1597	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.03279	46.3	-	MKGA01	125	3166	2936	2/1/17	4/6/17	Scaffold	ETH Zurich	SAMN05717750	GCA_001982095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/095/GCA_001982095.1_ASM198209v1	-	RI-195
Streptococcus oralis	1303	PRJNA302716	302716	Terrabacteria group	Firmicutes	1.91019	41.4	-	MUXP01	11	1875	1795	3/3/17	3/6/17	Scaffold	TAILORED-Treatment project	SAMN06299363	GCA_002014885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/885/GCA_002014885.1_ASM201488v1	-	CCUG 13229
Acinetobacter nosocomialis	106654	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.26996	38.4	-	DGCY01	402	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454527	GCA_002385165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/165/GCA_002385165.1_ASM238516v1	28894102	-
Klebsiella variicola	244366	PRJNA321569	321569	Proteobacteria	Gammaproteobacteria	5.7479	56.9	-	LZGB01	30	5739	5474	8/10/17	8/14/17	Scaffold	CSIR-Institute of Microbial Technology	SAMN04992848	GCA_002245455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/455/GCA_002245455.1_ASM224545v1	-	KV093
Pseudoalteromonas sp. TAE80	1938598	PRJNA202436	202436	Proteobacteria	Gammaproteobacteria	4.97117	39.3	-	AUTM01	360	4772	4089	11/20/13	4/2/17	Scaffold	University of Florence	SAMN02260212	GCA_000498035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/035/GCA_000498035.1_TAE80	28095778	TAE80
Helicobacter cetorum MIT 99-5656	1163745	PRJNA97499	97499	Proteobacteria	delta/epsilon subdivisions	1.84779	35.5778	chromosome:NC_017735.1/CP003481.1; plasmid pHCD:NC_017736.1/CP003482.1	-	2	1747	1621	4/19/12	4/7/17	Complete Genome	"Dept. Molec. Microbiology, Washington University Medical School in Saint Louis"	SAMN02603198	GCA_000259275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/275/GCA_000259275.1_ASM25927v1	24358262	MIT 99-5656
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	4.05407	38.8	-	MDHO01	124	3956	3788	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022841	GCA_001706055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/055/GCA_001706055.1_ASM170605v1	-	St-10592-91
Citrobacter freundii	546	PRJNA252011	252011	Proteobacteria	Gammaproteobacteria	5.25641	51.5	-	JRTG01	146	5250	4982	10/26/15	4/4/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02872789	GCA_001413215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/215/GCA_001413215.1_ASM141321v1	25501822	RU2 BHI13
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.85199	55.2	-	JZYK01	68	4771	4548	3/19/15	3/25/17	Contig	JCVI	SAMN03283675	GCA_000957255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/255/GCA_000957255.1_ASM95725v1	-	41948
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.61099	54.7	-	LDBM01	98	5658	5383	5/21/15	4/6/17	Contig	JCVI	SAMN03495949	GCA_001011535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/535/GCA_001011535.1_ASM101153v1	-	GN02525
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23986	64	-	FVVO01	23	5248	5084	3/10/17	3/18/17	Contig	SC	SAMEA2147405	GCA_900140075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/075/GCA_900140075.1_10665_2_62	-	515
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.94739	66.9	-	LPCL01	56	6456	6180	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449400	GCA_001528485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/485/GCA_001528485.1_ASM152848v1	-	MSMB2027WGS
Pseudomonas sp. URMO17WK12:I8	1265490	PRJNA182478	182478	Proteobacteria	Gammaproteobacteria	5.75281	62.8	-	JHVY01	43	5349	5141	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02952889	GCA_000620365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/365/GCA_000620365.1_ASM62036v1	-	URMO17WK12:I8
Streptomyces sp. 303MFCol5.2	1172181	PRJNA187949	187949	Terrabacteria group	Actinobacteria	9.5509	71.4	-	ARTR01	77	8463	8100	4/26/13	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441630	GCA_000383635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/635/GCA_000383635.1_ASM38363v1	-	303MFCol5.2
Bacillus sp. Leaf13	1736211	PRJNA297956	297956	Terrabacteria group	Firmicutes	5.99397	37.8	-	LMRJ01	87	5791	5439	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151581	GCA_001426005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/005/GCA_001426005.1_Leaf13	26633631	Leaf13
Acinetobacter sp. HA	1173062	PRJNA158435	158435	Proteobacteria	Gammaproteobacteria	3.12508	42.7	-	AJXD01	102	3054	2739	5/30/12	4/6/17	Contig	University of Delhi	SAMN02471709	GCA_000264725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/725/GCA_000264725.1_ASM26472v1	22933775	HA
Clostridium sp. DMHC 10	747377	PRJNA290415	290415	Terrabacteria group	Firmicutes	3.98883	30.6	-	LGVB01	16	3877	3012	8/18/15	4/17/17	Contig	"MACS Agharkar Research Institute, Pune (MS) India"	SAMN03891558	GCA_001270375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/375/GCA_001270375.1_ASM127037v1	-	DMHC 10
Sphingomonas sp. Leaf226	1735691	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.27156	66.1	-	LMKT01	29	3923	3780	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151689	GCA_001421625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/625/GCA_001421625.1_Leaf226	26633631	Leaf226
Synechococcus sp. TMED185	1986594	PRJNA385857	385857	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.42457	61.1	-	NHII01	69	1629	1563	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972039	GCA_002172045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/045/GCA_002172045.1_ASM217204v1	-	-
Rhodococcus sp. 06-156-4a	2022481	PRJNA395383	395383	Terrabacteria group	Actinobacteria	6.29671	64.4	-	NOYL01	45	5856	5723	8/18/17	8/21/17	Contig	Oregon State University	SAMN07376351	GCA_002258405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/405/GCA_002258405.1_ASM225840v1	-	06-156-4a
Enterobacter sp. HMSC055A11	1715020	PRJNA296147	296147	Proteobacteria	Gammaproteobacteria	5.77105	55.1	-	LTKN01	116	5509	5271	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04495801	GCA_001809025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/025/GCA_001809025.1_ASM180902v1	-	HMSC055A11
Staphylococcus sp. HMSC059F04	1739368	PRJNA300018	300018	Terrabacteria group	Firmicutes	2.48846	33.8	-	LTYE01	29	2369	2276	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480032	GCA_001812565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/565/GCA_001812565.1_ASM181256v1	-	HMSC059F04
Corynebacterium sp. HMSC055D05	1715213	PRJNA296342	296342	Terrabacteria group	Actinobacteria	2.3968	61.6	-	LTHX01	62	2282	2154	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477562	GCA_001810365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/365/GCA_001810365.1_ASM181036v1	-	HMSC055D05
Arthrobacter sp. Leaf145	1736274	PRJNA297956	297956	Terrabacteria group	Actinobacteria	4.494	63.2	-	LMON01	29	4238	4115	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151654	GCA_001423565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/565/GCA_001423565.1_Leaf145	26633631	Leaf145
Bradyrhizobium sp. LTSP885	1619232	PRJNA275239	275239	Proteobacteria	Alphaproteobacteria	7.85122	63.4	-	JYMT01	43	7295	7143	3/3/15	4/10/17	Scaffold	University of British Columbia	SAMN03340244	GCA_000938305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/305/GCA_000938305.1_ASM93830v1	-	LTSP885
Streptococcus sp. HMSC062H02	1739389	PRJNA300039	300039	Terrabacteria group	Firmicutes	1.95394	41.1	-	LTXM01	51	1940	1833	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480052	GCA_001813005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/005/GCA_001813005.1_ASM181300v1	-	HMSC062H02
Mycobacterium sp. GA-2613	1772271	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.70227	66.8	-	LQIH01	66	5504	5332	1/6/16	4/11/17	Contig	JCVI	SAMN04339709	GCA_001499835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/835/GCA_001499835.1_ASM149983v1	-	GA-2613
Prevotella sp. KH2C16	1855325	PRJEB17305	351524	FCB group	Bacteroidetes/Chlorobi group	3.22135	50.5	-	FOOW01	58	2796	2638	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216383	GCA_900113305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/305/GCA_900113305.1_IMG-taxon_2651870360_annotated_assembly	-	KH2C16
Enterococcus sp. 4E1_DIV0656	1834180	PRJNA313452	313452	Terrabacteria group	Firmicutes	4.146	42.3	-	NGLF01	7	3915	3739	5/16/17	5/24/17	Scaffold	Broad Institute	SAMN04634081	GCA_002140695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/695/GCA_002140695.1_ASM214069v1	-	4E1_DIV0656
Methylobacterium sp. UNCCL125	1502759	PRJEB17601	351964	Proteobacteria	Alphaproteobacteria	6.71243	69.7	-	FPBW01	83	6351	6036	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02799643	GCA_900116795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/795/GCA_900116795.1_IMG-taxon_2595698237_annotated_assembly	-	UNCCL125
Paenibacillus sp. JCM 10914	1236974	PRJDB672	231349	Terrabacteria group	Firmicutes	6.11225	48.6	-	BAZR01	95	5639	4614	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00000412	GCA_001315105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/105/GCA_001315105.1_ASM131510v1	-	JCM 10914
Thioalkalivibrio sp. ALE6	1266908	PRJNA183020	183020	Proteobacteria	Gammaproteobacteria	2.9637	66.8	-	AQPB01	61	2956	2798	4/15/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441754	GCA_000364565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/565/GCA_000364565.1_ASM36456v1	-	ALE6
Bacteroides sp. CAG:714	1262749	PRJEB986	206739	FCB group	Bacteroidetes/Chlorobi group	3.11164	47.1	-	CBGW01	83	2604	2561	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138689	GCA_000436055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/055/GCA_000436055.1_MGS714	-	-
Prochlorococcus sp. scB243_498N4	1471497	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.41229	31.3	-	JFMV01	126	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671368	GCA_000634335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/335/GCA_000634335.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. BCW_4338	1903595	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.8072	30.2	-	MJYJ01	66	1895	1726	10/4/16	4/13/17	Scaffold	University of California at Davis	SAMN03358059	GCA_001763255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/255/GCA_001763255.1_ASM176325v1	-	BCW_4338
Neisseria sp. 74A18	1696094	PRJNA291416	291416	Proteobacteria	Betaproteobacteria	2.57293	50.4	-	LGZA01	88	2470	2306	10/7/15	4/11/17	Contig	UCSF	SAMN03943944	GCA_001308005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/308/005/GCA_001308005.1_ASM130800v1	-	74A18
Rhizobium sp. WYCCWR10014	1825933	PRJNA319404	319404	Proteobacteria	Alphaproteobacteria	7.44591	60.8	-	LXFU01	53	7237	6912	6/3/16	4/12/17	Contig	Zhengzhou University of Light Industry	SAMN04887025	GCA_001657485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/485/GCA_001657485.1_ASM165748v1	-	WYCCWR10014
Mesorhizobium sp. LNJC403B00	1287280	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	5.9517	62.8	-	AYWD01	39	5830	5493	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359677	GCA_000503015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/015/GCA_000503015.1_Mloti_LNJC403B00	-	LNJC403B00
Microbacterium sp. LEMMJ01	1978350	PRJNA382155	382155	Terrabacteria group	Actinobacteria	3.63313	70.2	-	NCTV01	44	3548	3426	4/28/17	5/3/17	Contig	Federal University of Rio de Janeiro	SAMN06700302	GCA_002114135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/135/GCA_002114135.1_ASM211413v1	-	LEMMJ01
Bacillus velezensis	492670	PRJNA311096	311096	Terrabacteria group	Firmicutes	3.9894	46.3	-	LSZL01	53	3941	3776	5/19/16	3/22/17	Contig	Auburn University	SAMN04461071	GCA_001647965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/965/GCA_001647965.1_ASM164796v1	-	AP194
Gilliamella apicola	1196095	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	3.02892	33.5	-	NARS01	362	2716	2532	5/16/17	5/23/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603520	GCA_002141735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/735/GCA_002141735.1_ASM214173v1	-	A9
Klebsiella michiganensis	1134687	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	6.14727	55.6	-	NGSN01	7	5940	5644	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521925	GCA_002152325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/325/GCA_002152325.1_ASM215232v1	-	MGH176
Achromobacter sp. UBA4530	1945912	PRJNA348753	348753	Proteobacteria	Betaproteobacteria	6.16811	65.6	-	DGMA01	51	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451049	GCA_002388205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/205/GCA_002388205.1_ASM238820v1	28894102	-
Solemya velum gill symbiont	2340	PRJNA353273	353273	Proteobacteria	Gammaproteobacteria	2.07311	51.3	-	MPPW01	637	2516	2377	3/6/17	3/6/17	Scaffold	Harvard University	SAMN06016238	GCA_002020385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/385/GCA_002020385.1_ASM202038v1	-	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.8008	57	-	FXMZ01	115	5881	5505	4/28/17	5/6/17	Scaffold	SC	SAMEA2609379	GCA_900180805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/805/GCA_900180805.1_14936_2_77	-	3189STDY5864931
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.83312	32.3	-	FQRF01	14	2861	2686	11/25/16	4/6/17	Contig	SC	SAMEA3449083	GCA_900128195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/195/GCA_900128195.1_17175_3_27	-	3688STDY6125075
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.73926	67.5	-	LPLR01	106	7027	6655	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449651	GCA_001534225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/225/GCA_001534225.1_ASM153422v1	-	MSMB777WGS
Xanthomonas axonopodis pv. manihotis str. Xam668	1185327	PRJNA163523	163523	Proteobacteria	Gammaproteobacteria	4.95486	64.9	-	AKFF01	195	4433	4062	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090296	GCA_000266665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/665/GCA_000266665.1_Xam668	22699502	Xam668
Xanthomonas axonopodis pv. manihotis str. Xam669	1185655	PRJNA163705	163705	Proteobacteria	Gammaproteobacteria	4.8203	65.2	-	AKFG01	137	4269	3954	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090297	GCA_000266685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/685/GCA_000266685.1_Xam669	22699502	Xam669
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.87189	67.5	-	LPMH01	103	7096	6730	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449667	GCA_001534285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/285/GCA_001534285.1_ASM153428v1	-	MSMB811WGS
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.83204	32.3	-	FQRH01	13	2858	2683	11/25/16	4/6/17	Contig	SC	SAMEA3449085	GCA_900128205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/205/GCA_900128205.1_17175_3_29	-	3688STDY6125077
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.70886	57.2	-	FXNV01	307	5688	5316	4/28/17	5/6/17	Scaffold	SC	SAMEA2609383	GCA_900180855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/855/GCA_900180855.1_14936_2_78	-	3189STDY5864932
Klebsiella michiganensis	1134687	PRJNA174058	174058	Proteobacteria	Gammaproteobacteria	5.8447	56	-	AMPJ01	114	5349	5254	10/31/12	7/8/16	Contig	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN02470033	GCA_000308735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/735/GCA_000308735.2_ASM30873v2	23405358	M5al
Gilliamella apicola	1196095	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	3.14501	33.6	-	NART01	189	2873	2733	5/16/17	5/23/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603521	GCA_002141745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/745/GCA_002141745.1_ASM214174v1	-	A-9-12
Bacillus velezensis	492670	PRJNA321939	321939	Terrabacteria group	Firmicutes	4.04106	45.9	-	LYUF01	36	4084	3877	6/21/16	3/22/17	Contig	Microbial Institute for Fermentation Industry	SAMN05162509	GCA_001672595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/595/GCA_001672595.1_ASM167259v1	-	SRCM100731
Microbacterium sp. Yaish 1	2025014	PRJNA397331	397331	Terrabacteria group	Actinobacteria	3.40867	70.3	-	NPMR01	3	3225	3126	8/9/17	8/12/17	Contig	Sultan Qaboos University	SAMN07453917	GCA_002245215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/215/GCA_002245215.1_ASM224521v1	-	Yaish 1
Mesorhizobium sp. LSHC412B00	1287285	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.5241	62.5	-	AYWB01	49	6441	6004	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359679	GCA_000503035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/035/GCA_000503035.1_Mloti_LSHC412B00	-	LSHC412B00
Rhizobium sp. RSm-3	1720346	PRJNA296467	296467	Proteobacteria	Alphaproteobacteria	6.91209	61.4	-	MAWZ01	60	6702	6417	10/26/16	4/13/17	Contig	University of North Bengal	SAMN04099707	GCA_001854685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/685/GCA_001854685.1_ASM185468v1	-	RSm-3
Neisseria sp. 83E34	1692264	PRJNA291318	291318	Proteobacteria	Betaproteobacteria	2.41901	48.3	-	LGYH01	40	2320	2200	10/7/15	4/11/17	Contig	UCSF	SAMN03941560	GCA_001308015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/308/015/GCA_001308015.1_ASM130801v1	-	8.30E+35
Campylobacter sp. BCW_4341	1903596	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.77311	30.2	-	MKAH01	55	1839	1688	10/4/16	4/13/17	Scaffold	University of California at Davis	SAMN03358060	GCA_001764255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/255/GCA_001764255.1_ASM176425v1	-	BCW_4341
Prochlorococcus sp. scB243_498N8	1471498	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.907618	31.1	-	JFMW01	445	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671369	GCA_000634355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/355/GCA_000634355.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Bacteroides sp. CAG:1076	1262735	PRJEB685	206654	FCB group	Bacteroidetes/Chlorobi group	2.90732	42.5	-	CAZB01	162	2372	2333	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138724	GCA_000436795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/795/GCA_000436795.1_MGS1076	-	-
Thioalkalivibrio sp. ALE14	1158168	PRJNA182411	182411	Proteobacteria	Gammaproteobacteria	3.02461	66.6	-	AQXY01	31	2993	2832	4/22/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02440418	GCA_000376845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/845/GCA_000376845.1_ASM37684v1	-	ALE14
Paenibacillus sp. FF9	1527293	PRJEB8435	280715	Terrabacteria group	Firmicutes	4.56943	45.7	-	CDSE01	102	4373	4147	4/9/15	4/11/17	Contig	URMITE	SAMEA3246153	GCA_001373415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/415/GCA_001373415.1_Paenibacillus_dakarensis_FF9	-	FF9
Methylobacterium sp. 174MFSha1.1	1502749	PRJEB17603	351966	Proteobacteria	Alphaproteobacteria	7.43722	70.6	-	FPCB01	87	6730	6425	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02799631	GCA_900116815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/815/GCA_900116815.1_IMG-taxon_2590828856_annotated_assembly	-	174MFSha1.1
Enterococcus sp. 4G2_DIV0659	1834181	PRJNA313452	313452	Terrabacteria group	Firmicutes	3.49233	36	-	NGLE01	15	3170	3042	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634079	GCA_002140715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/715/GCA_002140715.1_ASM214071v1	-	4G2_DIV0659
Prevotella sp. tf2-5	1761889	PRJEB17227	351443	FCB group	Bacteroidetes/Chlorobi group	3.51183	46.5	-	FOWK01	23	2894	2781	10/30/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487852	GCA_900115435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/435/GCA_900115435.1_IMG-taxon_2623620458_annotated_assembly	-	TF2-5
Mycobacterium sp. GA-2945b	1772273	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.64492	66.8	-	LQIJ01	73	5453	5284	1/6/16	4/11/17	Contig	JCVI	SAMN04349490	GCA_001499845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/845/GCA_001499845.1_ASM149984v1	-	GA-2945b
Streptococcus sp. HMSC071H03	1739391	PRJNA300041	300041	Terrabacteria group	Firmicutes	1.94237	38.8	-	LTXK01	38	1973	1738	10/17/16	4/17/17	Scaffold	The Genome Institute at Washington University	SAMN04480053	GCA_001813035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/035/GCA_001813035.1_ASM181303v1	-	HMSC071H03
Bradyrhizobium sp. BR 10303	1755647	PRJNA301972	301972	Proteobacteria	Alphaproteobacteria	8.72214	63.2	-	LNCU01	137	8162	7593	1/28/16	4/11/17	Scaffold	Embrapa Agrobiologia	SAMN04262301	GCA_001542415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/415/GCA_001542415.1_ASM154241v1	-	BR 10303
Arthrobacter sp. Leaf337	1736342	PRJNA297956	297956	Terrabacteria group	Actinobacteria	5.20117	65.4	-	LMPC01	31	4740	4564	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151732	GCA_001423745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/745/GCA_001423745.1_Leaf337	26633631	Leaf337
Corynebacterium sp. HMSC077B05	1739252	PRJNA299902	299902	Terrabacteria group	Actinobacteria	2.67895	63.6	-	LTHS01	66	2498	2380	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477585	GCA_001810505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/505/GCA_001810505.1_ASM181050v1	-	HMSC077B05
Staphylococcus sp. HMSC075H09	1739377	PRJNA300027	300027	Terrabacteria group	Firmicutes	2.26017	31.2	-	LWQL01	104	2213	2082	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480041	GCA_001812765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/765/GCA_001812765.1_ASM181276v1	-	HMSC075H09
Enterobacter sp. Ag1	1202448	PRJNA169065	169065	Proteobacteria	Gammaproteobacteria	4.74665	54.9	-	AKXM01	64	4547	4379	7/10/12	5/18/17	Contig	New Mexico State University	SAMN02470680	GCA_000277545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/545/GCA_000277545.1_ASM27754v1	22965099	Ag1
Rhodococcus sp. 06-156-3b	2022480	PRJNA395383	395383	Terrabacteria group	Actinobacteria	6.30966	64.3	-	NOYN01	48	5867	5737	8/18/17	8/21/17	Contig	Oregon State University	SAMN07376350	GCA_002258445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/445/GCA_002258445.1_ASM225844v1	-	06-156-3b
Synechococcus sp. TMED169	1986593	PRJNA385857	385857	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.52124	57.9	-	NHHS01	97	1751	1663	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972023	GCA_002172175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/175/GCA_002172175.1_ASM217217v1	-	-
Sphingomonas sp. Leaf32	1736214	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	3.94628	66.9	-	LMLA01	14	3619	3520	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151594	GCA_001421765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/765/GCA_001421765.1_Leaf32	26633631	Leaf32
Clostridium sp. L74	1560217	PRJNA263322	263322	Terrabacteria group	Firmicutes	3.68721	27.1	-	LITJ01	81	3374	3188	8/31/15	4/11/17	Contig	KRIBB	SAMN03107535	GCA_001276215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/215/GCA_001276215.1_ASM127621v1	26981432	L74
Acinetobacter sp. GG2	651305	PRJNA171723	171723	Proteobacteria	Gammaproteobacteria	3.87311	38.4	-	ALOW01	40	3680	3534	8/20/12	4/6/17	Contig	University of Malaya	SAMN02471865	GCA_000292385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/385/GCA_000292385.1_ASM29238v1	23105061	GG2
Bacillus sp. Leaf75	1736235	PRJNA297956	297956	Terrabacteria group	Firmicutes	6.03156	37.4	-	LMRL01	75	6226	5930	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151615	GCA_001426025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/025/GCA_001426025.1_Leaf75	26633631	Leaf75
Streptomyces sp. 351MFTsu5.1	1172180	PRJNA187950	187950	Terrabacteria group	Actinobacteria	9.33012	71	-	ARTS01	45	8444	8095	4/26/13	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441631	GCA_000383655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/655/GCA_000383655.1_ASM38365v1	-	351MFTsu5.1
Pseudomonas sp. AAC	1502784	PRJNA248604	248604	Proteobacteria	Gammaproteobacteria	7.06773	67	-	JNCW01	25	6254	6069	7/15/14	4/9/17	Scaffold	CSIRO	SAMN02799455	GCA_000725445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/445/GCA_000725445.1_ASM72544v1	25912724	AAC
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.41216	66.8	-	LPCW01	80	7778	7413	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449415	GCA_001528675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/675/GCA_001528675.1_ASM152867v1	-	MSMB1055WGS
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.86194	64.2	-	FVVN01	13	4793	4653	3/10/17	3/18/17	Contig	SC	SAMEA2149450	GCA_900140135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/135/GCA_900140135.1_10665_2_63	-	516
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.12029	55	-	LDBS01	59	5054	4843	5/21/15	4/6/17	Contig	JCVI	SAMN03495955	GCA_001011545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/545/GCA_001011545.1_ASM101154v1	-	GN03688
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.92357	55.1	-	JZYE01	73	4887	4665	3/19/15	3/25/17	Contig	JCVI	SAMN03283655	GCA_000957305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/305/GCA_000957305.1_ASM95730v1	-	42336
Citrobacter freundii	546	PRJNA252011	252011	Proteobacteria	Gammaproteobacteria	5.25427	51.5	-	JRTO01	171	5252	4978	10/26/15	4/4/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02872797	GCA_001413315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/315/GCA_001413315.1_ASM141331v1	25501822	RU2 BHI21
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	4.04109	38.6	-	MDHQ01	114	3915	3712	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022851	GCA_001706065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/065/GCA_001706065.1_ASM170606v1	-	St-19650-90
Bacillus toyonensis BCT-7112	1415784	PRJNA225857	225857	Terrabacteria group	Firmicutes	5.02542	35.552	chromosome:NC_022781.1/CP006863.1; plasmid pBCT77:NC_022782.1/CP006864.1; plasmid pBCT8:NC_022783.1/CP006865.1	-	3	5377	4999	11/8/13	4/9/17	Complete Genome	"RUBINUM, S.A."	SAMN02389599	GCA_000496285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/285/GCA_000496285.1_ASM49628v1	"2,379,120,324,356,840"	BCT-7112
Pseudoalteromonas sp. TAB23	1938595	PRJNA202433	202433	Proteobacteria	Gammaproteobacteria	5.13909	39.1	-	AUTP01	367	4794	4127	11/20/13	5/24/17	Scaffold	University of Florence	SAMN02260211	GCA_000498075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/075/GCA_000498075.1_TAB23	28095778	TAB23
Klebsiella variicola	244366	PRJEB8302	276432	Proteobacteria	Gammaproteobacteria	9.5794	57.6	-	CDRB01	2171	-	-	2/24/15	2/24/15	Contig	CGS-GL	SAMEA3218003	GCA_000941455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/455/GCA_000941455.1_B8C2_assembly	-	B8C2
Acinetobacter nosocomialis	106654	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.83449	38.7	-	DGKU01	48	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455507	GCA_002387805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/805/GCA_002387805.1_ASM238780v1	28894102	-
Streptococcus oralis subsp. oralis	1891914	PRJNA304678	304678	Terrabacteria group	Firmicutes	2.0325	41.1	-	NCUV01	24	2067	1934	4/18/17	4/21/17	Scaffold	Slagelse Hospital	SAMN06705613	GCA_002096175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/175/GCA_002096175.1_ASM209617v1	27325438	OD_338919_11
Lactobacillus paracasei subsp. tolerans DSM 20258	1423830	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.38324	46.4	-	AYYJ01	389	2490	2130	11/6/15	4/4/17	Scaffold	Shanghai Majorbio	SAMN02369371	GCA_001436485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/436/485/GCA_001436485.1_ASM143648v1	-	DSM 20258
Yersinia ruckeri	29486	PRJEB6967	262470	Proteobacteria	Gammaproteobacteria	3.83052	47.4	-	CCYO01	63	3518	3331	10/20/14	4/2/17	Scaffold	UCONNMISEQ	SAMEA2698059	GCA_000824965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/965/GCA_000824965.1_RuckeriXTk35	-	CSF007-82
Flavobacterium psychrophilum DSM 3660	1121894	PRJEB15787	347714	FCB group	Bacteroidetes/Chlorobi group	2.62614	32.5	-	FMVE01	42	2381	2265	10/17/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745938	GCA_900101925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/925/GCA_900101925.1_IMG-taxon_2622736523_annotated_assembly	-	DSM 3660
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.88264	67	-	LPBR01	141	7124	6728	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449380	GCA_001526655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/655/GCA_001526655.1_ASM152665v1	-	MSMB1832WGS
Aeromonas hydrophila	644	PRJEB18852	360730	Proteobacteria	Gammaproteobacteria	4.83377	61.2	-	FTME01	25	4467	4268	1/14/17	4/6/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05878295	GCA_900155975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/975/GCA_900155975.1_IMG-taxon_2708742399_annotated_assembly	-	RU34A
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.70992	64.6	-	DBUK01	9	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06454429	GCA_002307875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/875/GCA_002307875.1_ASM230787v1	28894102	-
Vibrio sp. V06_P1A73T115	1938661	PRJNA361511	361511	Proteobacteria	Gammaproteobacteria	3.57152	45.1	-	NDIB01	391	3313	3092	8/4/17	8/6/17	Scaffold	Instituto de ecologia	SAMN06251402	GCA_002241185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/185/GCA_002241185.1_ASM224118v1	-	V06_P1A73T115
Mycobacterium abscessus subsp. bolletii 2B-0626	1001708	PRJNA65147	65147	Terrabacteria group	Actinobacteria	4.81087	64.2	-	AKUM01	6	4810	4708	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00672642	GCA_000270905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/905/GCA_000270905.1_ASM27090v1	-	2B-0626
Lactobacillus salivarius	1624	PRJNA357984	357984	Terrabacteria group	Firmicutes	1.97785	32.8	-	NBEO01	50	1973	1845	4/5/17	4/8/17	Scaffold	University College Cork	SAMN06163259	GCA_002079625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/625/GCA_002079625.1_ASM207962v1	-	CCuG47826
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.48096	56.9	-	MRXR01	32	4311	4128	3/31/17	4/6/17	Contig	FDA/CFSAN	SAMN06124507	GCA_002075715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/715/GCA_002075715.1_ASM207571v1	-	MOD1-33SS8
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.23705	54.8	-	FKZU01	72	6100	5821	5/19/16	2/25/17	Scaffold	SC	SAMEA2273578	GCA_900083725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/725/GCA_900083725.1_12045_6_46	-	2880STDY5682493
Enterobacter cloacae	550	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.65771	55.3	-	LESZ01	6	4552	4329	6/19/15	3/26/17	Scaffold	Broad Institute	SAMN03280175	GCA_001030195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/195/GCA_001030195.1_Ente_cloa_UCI85_V1	-	UCI85
Proteus mirabilis	584	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.91102	38.6	-	JVMQ01	125	3577	3458	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197486	GCA_001064375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/375/GCA_001064375.1_ASM106437v1	26230489	292_PMIR
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.44176	32.7	-	CUFR01	80	2401	2295	3/31/15	3/26/17	Contig	SC	SAMEA1035156	GCA_001233845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/845/GCA_001233845.1_7068_7_26	-	115609
Propionibacterium acnes HL110PA3	765079	PRJNA49191	49191	Terrabacteria group	Actinobacteria	2.49312	60	-	ADYG01	29	2481	2252	8/4/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189249	GCA_000145055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/055/GCA_000145055.1_ASM14505v1	-	HL110PA3
Burkholderia sp. ABCPW 14	1637860	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.22087	66.3	-	LOVS01	215	6911	6162	1/21/16	4/11/17	Contig	Northern Arizona University	SAMN03449209	GCA_001523835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/835/GCA_001523835.1_ASM152383v1	-	ABCPW-14
Campylobacter coli LMG 9854	887302	PRJNA52741	52741	Proteobacteria	delta/epsilon subdivisions	1.71568	31.3	-	AINL01	118	1783	1684	3/16/12	3/15/17	Contig	Cornell University	SAMN02428941	GCA_000253995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/995/GCA_000253995.2_ASM25399v2	-	LMG 9854
Mannheimia haemolytica	75985	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.66272	41	-	LQFI01	105	2776	2597	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366556	GCA_001930695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/695/GCA_001930695.1_ASM193069v1	-	3022MH
Lactobacillus plantarum LP91	1403542	PRJNA221362	221362	Terrabacteria group	Firmicutes	2.92558	45.1	-	AXDQ01	145	2835	2671	10/17/13	3/24/17	Contig	National Dairy Research Institute	SAMN02470621	GCA_000473935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/935/GCA_000473935.1_LP1_1.0	24265501	LP91
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.11755	59.3	-	JVXJ01	117	4803	4686	7/10/15	3/26/17	Contig	University of Washington	SAMN03197207	GCA_001060625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/625/GCA_001060625.1_ASM106062v1	26230489	1241_SMAR
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.08166	41.6	-	JJQT01	257	3552	3254	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708971	GCA_000980085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/085/GCA_000980085.1_gtlEnvA5udCFS	25756680	1.H.M.1A.3
Yersinia enterocolitica	630	PRJEB13626	384942	Proteobacteria	Gammaproteobacteria	4.41846	47	-	FKKK01	157	4181	3898	5/1/17	5/9/17	Contig	IP	SAMEA3935401	GCA_900079815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/815/GCA_900079815.1_IP35475	-	-
Mycoplasma pneumoniae	2104	PRJNA267612	267612	Terrabacteria group	Tenericutes	0.807092	39.9	-	JTGW01	20	798	698	12/2/15	4/4/17	Scaffold	Capital Institute of Pediatrics	SAMN03142253	GCA_001455795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/795/GCA_001455795.1_ASM145579v1	-	CIP12265
Corynebacterium diphtheriae	1717	PRJNA359739	359739	Terrabacteria group	Actinobacteria	2.43743	53.5	-	MSSZ01	73	2372	1982	1/5/17	4/10/17	Contig	"CMC, Vellore"	SAMN06197330	GCA_001937315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/315/GCA_001937315.1_ASM193731v1	-	WD46
Bordetella bronchiseptica MBORD678	1331228	PRJNA202140	202140	Proteobacteria	Betaproteobacteria	5.18479	68.2	-	JHBQ01	50	4908	4790	5/13/14	4/2/17	Contig	JCVI	SAMN02231436	GCA_000690615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/615/GCA_000690615.1_gbb32v01	25908122	MBORD678
Bacillus cereus NC7401	334406	PRJDA18977	18977	Terrabacteria group	Firmicutes	5.55203	35.5372	chromosome:NC_016771.1/AP007209.1; plasmid pNC1:NC_016772.1/AP007211.1; plasmid pNC2:NC_016773.1/AP007212.1; plasmid pNC3:NC_016793.1/AP007213.1; plasmid pNC4:NC_016774.1/AP007214.1; plasmid pNCcld:NC_016792.1/AP007210.1	-	6	5968	5628	11/29/11	3/23/17	Complete Genome	Kitasato Institute for Life Sciences	SAMD00060916	GCA_000283675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/675/GCA_000283675.1_ASM28367v1	22887669	NC7401
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31295	57.2358	chromosome 1:NZ_CP018524.1/CP018524.1; chromosome 2:NZ_CP018525.1/CP018525.1	-	2	3374	3148	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932966	GCA_002192075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/075/GCA_002192075.1_ASM219207v1	28388689	BwIM_SYR_23
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	3.02443	46.6	-	JTHX01	56	3067	2856	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196651	GCA_001656575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/575/GCA_001656575.1_ASM165657v1	-	Lrh31
Pasteurella multocida subsp. multocida	44283	PRJNA303094	303094	Proteobacteria	Gammaproteobacteria	2.28323	40.3	-	LUCX01	16	2153	2065	6/20/16	4/5/17	Scaffold	Sichuan Agricultural University	SAMN04285688	GCA_001670425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/670/425/GCA_001670425.1_ASM167042v1	-	HN141014
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15939	41.1	-	CWAG01	77	2097	1928	6/23/15	3/26/17	Contig	SC	SAMEA1032811	GCA_001175985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/985/GCA_001175985.1_6903_3_32	-	EQUI0081
Stenotrophomonas maltophilia	40324	PRJNA299450	299450	Proteobacteria	Gammaproteobacteria	4.48462	66.8	-	LLXV01	109	4078	3935	11/4/15	3/27/17	Contig	CSIR-Institute of Microbial Technology	SAMN04207868	GCA_001431665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/665/GCA_001431665.1_ASM143166v1	27014232	LMG 978
Chlamydia psittaci 06-1683	1112244	PRJNA77061	77061	PVC group	Chlamydiae	1.27069	39.7	-	ATLF01	345	2229	2188	6/25/13	11/19/13	Scaffold	University of Maryland School of Medicine	SAMN01821298	GCA_000415845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/845/GCA_000415845.1_ASM41584v1	-	06-1683
Enterococcus faecium R446	1134834	PRJNA82057	82057	Terrabacteria group	Firmicutes	2.98033	37.7	-	AMAJ01	219	3109	2895	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299509	GCA_000294955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/955/GCA_000294955.2_ASM29495v2	-	R446
Neisseria gonorrhoeae SK28355	1352515	PRJNA209373	209373	Proteobacteria	Betaproteobacteria	2.0737	52.6	-	ATPU01	417	2448	2065	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02338797	GCA_001026185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/185/GCA_001026185.1_ASM102618v1	-	SK28355
Streptococcus mutans TCI-260	1074176	PRJNA72091	72091	Terrabacteria group	Firmicutes	1.799	37	-	AGMC01	141	1834	1709	10/6/11	3/22/17	Contig	JCVI	SAMN02436357	GCA_000229745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/745/GCA_000229745.2_SMUT7-NEX_5-260	-	TCI-260
Enterococcus faecalis E1Sol	565647	PRJNA32941	32941	Terrabacteria group	Firmicutes	2.8819	37.6	-	ACAQ01	14	2919	2771	6/12/09	3/22/17	Scaffold	Broad Institute	SAMN02595261	GCA_000157395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/395/GCA_000157395.1_ASM15739v1	-	E1Sol
Brucella suis 1330	204722	PRJNA238006	238006	Proteobacteria	Alphaproteobacteria	3.28062	57.3	-	JELT01	112	3287	2706	6/11/14	6/11/14	Contig	"The Federal Goverment Health Institution ""Stavropol Plague Control Reseach Institute"" of the Federal Service for Supervision in the Sphere of Consumer Rights Protection and Human Welfare"	SAMN02640305	GCA_000701065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/065/GCA_000701065.1_Bru1330	-	1330
Clostridium botulinum CDC54088	1435052	PRJNA231045	231045	Terrabacteria group	Firmicutes	3.86811	28.2	-	AZRS01	469	3818	2955	2/25/14	3/24/17	Contig	Centers for Disease Control and Prevention	SAMN02951883	GCA_000582415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/415/GCA_000582415.1_CDC54088.1	24632257	CDC54088
Bacillus cereus AH187	405534	PRJNA17715	17715	Terrabacteria group	Firmicutes	5.59986	35.5213	chromosome:NC_011658.1/CP001177.1; plasmid pAH187_12:NC_011654.1/CP001178.1; plasmid pAH187_270:NC_011655.1/CP001179.1; plasmid pAH187_3:NC_011657.1/CP001181.1; plasmid pAH187_45:NC_011656.1/CP001180.1	-	5	6037	5690	12/10/08	5/18/17	Complete Genome	TIGR	SAMN02604058	GCA_000021225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/225/GCA_000021225.1_ASM2122v1	-	AH187
Bacillus weihenstephanensis KBAB4	315730	PRJNA13623	13623	Terrabacteria group	Firmicutes	5.87274	35.5202	chromosome:NC_010184.1/CP000903.1; plasmid pBWB401:NC_010180.1/CP000904.1; plasmid pBWB402:NC_010181.1/CP000905.1; plasmid pBWB403:NC_010182.1/CP000906.1; plasmid pBWB404:NC_010183.1/CP000907.1	-	5	6165	5757	12/21/07	5/18/17	Complete Genome	US DOE Joint Genome Institute	SAMN00623031	GCA_000018825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/825/GCA_000018825.1_ASM1882v1	17434157	KBAB4
Vibrio parahaemolyticus	670	PRJNA288141	288141	Proteobacteria	Gammaproteobacteria	5.23358	45.3	-	LFWO01	58	5032	4803	8/17/15	3/18/17	Scaffold	Health Canada	SAMN03795180	GCA_001267965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/965/GCA_001267965.1_ASM126796v1	-	RM-13-3
Streptococcus mitis	28037	PRJNA304333	304333	Terrabacteria group	Firmicutes	2.2464	40.0958	plasmid unnamed:CM003839.1	LQZD01	170	2098	2081	3/2/16	3/24/16	Scaffold	University of Kaiserslautern	SAMN04325048	GCA_001579665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/665/GCA_001579665.1_ASM157966v1	27303717	DD22
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.98252	37.7	-	MLKQ01	397	2059	1797	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297004	GCA_001867395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/395/GCA_001867395.1_ASM186739v1	27118061	AWRIB1062
Xanthomonas oryzae pv. oryzae	64187	PRJNA269422	269422	Proteobacteria	Gammaproteobacteria	4.26305	64	-	JXES01	410	4193	3409	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252532	GCA_001927775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/775/GCA_001927775.1_ASM192777v1	-	DXO-122
Campylobacter fetus subsp. fetus	32019	PRJEB8721	292173	Proteobacteria	delta/epsilon subdivisions	1.83553	34.1	-	FAVC01	21	1960	1874	11/29/15	4/4/17	Scaffold	SC	SAMEA3403192	GCA_001486925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/486/925/GCA_001486925.1_17059_2_4	-	007A-0283
Xanthomonas citri subsp. citri	611301	PRJEB7162	306119	Proteobacteria	Gammaproteobacteria	5.245	64.6	-	CCWF01	61	4958	4874	12/16/15	12/16/15	Scaffold	Genoscope CEA	SAMEA2752240	GCA_001494255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/255/GCA_001494255.1_ASX_D_PRJEB7162_v1	-	-
Brucella abortus 63/168	1160177	PRJNA173571	173571	Proteobacteria	Alphaproteobacteria	3.28709	57.2	-	AQIX01	10	3373	3134	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00811159	GCA_000370045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/045/GCA_000370045.1_Bruc_abor_63_168_V1	-	63/168
Francisella tularensis subsp. holarctica URFT1	445226	PRJNA19645	19645	Proteobacteria	Gammaproteobacteria	1.80053	32.3	-	ABAZ01	480	1839	1452	9/3/09	4/10/17	Contig	"Unite des Rickettsies, CNRS"	SAMN02471335	GCA_000170295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/295/GCA_000170295.1_ASM17029v1	-	URFT1
Shigella boydii	621	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.8254	50.6	-	NIYS01	154	4992	4591	9/12/17	9/14/17	Contig	JCVI	SAMN07203024	GCA_002290485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/485/GCA_002290485.1_ASM229048v1	-	ESBL-W3-2
Clostridioides difficile	1496	PRJNA264745	264745	Terrabacteria group	Firmicutes	4.5495	29.1	-	JXCP01	56	4361	4174	1/26/15	3/16/17	Scaffold	Universidad de Costa Rica	SAMN03140386	GCA_000828325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/325/GCA_000828325.1_ASM82832v1	25653402	LIBA-5704
Vibrio cholerae HC-38A1	991959	PRJNA63925	63925	Proteobacteria	Gammaproteobacteria	4.03606	47.5	-	AFOV01	135	3823	3685	7/26/11	3/22/17	Scaffold	Institute for Genome Sciences	SAMN00249593	GCA_000221485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/485/GCA_000221485.1_ASM22148v1	-	HC-38A1
Ralstonia solanacearum	305	PRJNA257008	257008	Proteobacteria	Betaproteobacteria	5.26173	66.7	-	LVKV01	130	4659	4427	8/2/16	4/5/17	Contig	µFORGE	SAMN04216073	GCA_001696875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/875/GCA_001696875.1_RSOL004-SEQ-1-ASM-1	-	UW551
Bacillus thuringiensis DB27	1431339	PRJEB5006	236364	Terrabacteria group	Firmicutes	6.08626	35.6	-	CBXL01	63	6425	5712	1/23/14	4/2/17	Scaffold	WTSI	SAMEA3138883	GCA_000530375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/375/GCA_000530375.1_BTDB27_001	-	DB27
Burkholderia mallei	13373	PRJNA257008	257008	Proteobacteria	Betaproteobacteria	5.14943	68.5	-	LUFM01	215	5504	4947	4/4/16	4/5/17	Contig	µFORGE	SAMN04260153	GCA_001608415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/415/GCA_001608415.1_BMAL007-SEQ-1-ASM-1	-	BURK081
Bacillus cereus	1396	PRJNA326992	326992	Terrabacteria group	Firmicutes	5.44835	35.52	chromosome:NZ_CP016316.1/CP016316.1; plasmid pBCM301:NZ_CP016317.1/CP016317.1	-	2	5798	5406	7/5/17	7/7/17	Complete Genome	Korea Food Research Institute	SAMN05300199	GCA_002214725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/725/GCA_002214725.1_ASM221472v1	-	M3
Weissella koreensis KACC 15510	1045854	PRJNA67979	67979	Terrabacteria group	Firmicutes	1.44147	35.5158	chromosome:NC_015759.1/CP002899.1; plasmid WKp2903:NC_015756.1/CP002900.1	-	2	1404	1320	6/30/11	4/7/17	Complete Genome	Chung-Ang Univ.	SAMN02603132	GCA_000219805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/805/GCA_000219805.1_ASM21980v1	21914863	KACC 15510
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.82032	67	-	MUPV01	154	7459	7046	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001803	GCA_001991435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/435/GCA_001991435.1_ASM199143v1	-	VC4462
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.07992	38.7	-	NGPD01	136	1998	1845	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848401	GCA_002253705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/705/GCA_002253705.1_ASM225370v1	-	609d
Bacteroides fragilis str. 3397 N3	1339301	PRJNA206144	206144	FCB group	Bacteroidetes/Chlorobi group	5.20476	43.3	-	JGEG01	102	4646	4333	3/20/14	4/18/17	Contig	IGS	SAMN02314529	GCA_000598925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/925/GCA_000598925.1_ASM59892v1	-	3397 N3
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.64436	50.8	-	CXKM01	399	5171	4446	7/16/15	2/24/17	Contig	SC	SAMEA2003916	GCA_001258315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/315/GCA_001258315.1_8290_4_43	-	99608
Bacillus cereus ATCC 10987	222523	PRJNA74	74	Terrabacteria group	Firmicutes	5.43265	35.5156	chromosome:NC_003909.8/AE017194.1; plasmid pBc10987:NC_005707.1/AE017195.1	-	2	5816	5408	4/10/02	5/18/17	Complete Genome	TIGR	SAMN02603979	GCA_000008005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/005/GCA_000008005.1_ASM800v1	14960714	ATCC 10987
Bacillus licheniformis	1402	PRJNA270588	270588	Terrabacteria group	Firmicutes	4.28801	45.8	-	LQYM01	33	4476	4289	3/11/16	4/5/17	Scaffold	University of Groningen	SAMN03267274	GCA_001587315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/315/GCA_001587315.1_B4091	27174261	B4091
Vibrio vulnificus	672	PRJNA355116	355116	Proteobacteria	Gammaproteobacteria	5.07029	46.5	-	NOJC01	128	4871	4589	8/22/17	8/24/17	Contig	FDA	SAMN06062369	GCA_002265345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/345/GCA_002265345.1_ASM226534v1	-	WAPHLVBRA00006
Pseudomonas syringae pv. actinidiae TP6-1	1104685	PRJNA74977	74977	Proteobacteria	Gammaproteobacteria	6.2241	58.5	-	ANJH01	483	5987	5485	3/5/13	5/19/17	Contig	University of Otago	SAMN02471914	GCA_000344455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/455/GCA_000344455.1_TP6-1_PSA1.0	23555547	TP6-1
Streptococcus suis 89-5259	1214173	PRJNA171434	171434	Terrabacteria group	Firmicutes	2.45846	41.3	-	ALLM01	141	2499	2299	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469554	GCA_000440675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/675/GCA_000440675.1_version1	-	89-5259
Streptococcus agalactiae GBS10	1333564	PRJNA203048	203048	Terrabacteria group	Firmicutes	2.03276	35.1	-	ATPB01	379	2225	1888	7/3/13	3/15/17	Scaffold	The Genome Institute	SAMN02436899	GCA_000419255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/255/GCA_000419255.1_S_agalactiaeGBS10-1.0	-	GBS10
Marivirga tractuosa DSM 4126	643867	PRJNA37901	37901	FCB group	Bacteroidetes/Chlorobi group	4.51649	35.5046	chromosome:NC_014759.1/CP002349.1; plasmid pFTRAC01:NC_014750.1/CP002350.1	-	2	3813	3740	11/30/10	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00138949	GCA_000183425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/425/GCA_000183425.1_ASM18342v1	21677852	DSM 4126
Bacillus cereus Q1	361100	PRJNA16220	16220	Terrabacteria group	Firmicutes	5.50621	35.504	chromosome:NC_011969.1/CP000227.1; plasmid pBc239:NC_011973.1/CP000228.1; plasmid pBc53:NC_011971.1/CP000229.1	-	3	5856	5513	1/23/09	5/18/17	Complete Genome	Microbial Genome Center of ChMPH	SAMN02603603	GCA_000013065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/065/GCA_000013065.1_ASM1306v1	19060151	Q1
Bifidobacterium longum subsp. longum	1679	PRJNA356203	356203	Terrabacteria group	Actinobacteria	2.32998	59.9	-	MRBG01	22	2005	1844	1/9/17	4/6/17	Contig	University of Parma	SAMN06109230	GCA_001940535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/535/GCA_001940535.1_BlonW11v1	-	W11
Shigella flexneri	623	PRJNA315925	315925	Proteobacteria	Gammaproteobacteria	4.69718	50.5	-	LVIF01	455	5486	4313	5/20/16	8/8/17	Contig	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04570173	GCA_001648945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/945/GCA_001648945.1_ASM164894v1	-	BJ4s01
Bacillus anthracis str. Kruger B	205919	PRJNA324	324	Terrabacteria group	Firmicutes	5.47001	35.1	-	AAEQ01	64	6106	5619	6/4/04	6/19/17	Scaffold	J. Craig Venter Institute	SAMN02435884	GCA_000167295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/295/GCA_000167295.1_ASM16729v1	-	Kruger B
Pseudomonas putida	303	PRJNA349188	349188	Proteobacteria	Gammaproteobacteria	6.96357	60.2	-	MNAH01	19	6358	6118	1/31/17	4/10/17	Contig	Olin College	SAMN05928284	GCA_001976065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/065/GCA_001976065.1_ASM197606v1	-	ASAD
Leptospira interrogans str. HAI1594	1193060	PRJNA167258	167258	Spirochaetes	Spirochaetia	4.60823	35	-	AKWC02	41	4105	3751	10/17/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436413	GCA_000306655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/655/GCA_000306655.2_gls454173v2.0	-	HAI1594
Streptococcus pyogenes	1314	PRJNA310843	310843	Terrabacteria group	Firmicutes	1.81194	38.5	chromosome:NZ_CP014278.2/CP014278.2	-	1	1853	1709	5/9/16	3/28/17	Chromosome	university of rennes1	SAMN04456596	GCA_001640945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/945/GCA_001640945.2_ASM164094v2	-	STAB13021
Elizabethkingia anophelis Ag1	1117646	PRJNA77829	77829	FCB group	Bacteroidetes/Chlorobi group	4.09381	35.5	chromosome:NZ_CP023402.1/CP023402.1	-	1	3780	3676	9/18/17	9/20/17	Complete Genome	New Mexico State University	SAMN02470679	GCA_000240095.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/095/GCA_000240095.3_ASM24009v3	24309745	Ag1
Elizabethkingia anophelis	1117645	PRJNA326741	326741	FCB group	Bacteroidetes/Chlorobi group	4.09381	35.5	chromosome:NZ_CP023404.1/CP023404.1	-	1	3780	3676	9/18/17	9/20/17	Complete Genome	CDC	SAMN07625922	GCA_002310515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/515/GCA_002310515.1_ASM231051v1	-	AR4-6
Streptococcus pneumoniae PNI0427	1159101	PRJNA89205	89205	Terrabacteria group	Firmicutes	2.03868	39.7	-	AKRK01	160	2295	2012	1/29/13	3/9/17	Scaffold	Washington University	SAMN02299533	GCA_000334835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/835/GCA_000334835.1_ASM33483v1	-	PNI0427
Elizabethkingia anophelis	1117645	PRJNA326741	326741	FCB group	Bacteroidetes/Chlorobi group	4.09381	35.5	chromosome:NZ_CP023403.1/CP023403.1	-	1	3780	3676	9/18/17	9/20/17	Complete Genome	CDC	SAMN07625921	GCA_002310535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/535/GCA_002310535.1_ASM231053v1	-	AR6-8
Elizabethkingia anophelis R26	1246994	PRJNA301708	301708	FCB group	Bacteroidetes/Chlorobi group	4.05831	35.5	chromosome:NZ_CP023401.1/CP023401.1	-	1	3737	3634	9/11/17	9/20/17	Complete Genome	CDC	SAMN02470677	GCA_002023665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/665/GCA_002023665.2_ASM202366v2	-	R26
Haemophilus influenzae	727	PRJNA285212	285212	Proteobacteria	Gammaproteobacteria	1.85744	38	-	LFDO01	30	1885	1746	7/21/15	3/26/17	Contig	University of Oklahoma Health Sciences Center	SAMN03702699	GCA_001184655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/655/GCA_001184655.1_ASM118465v1	26390432	HI1374
Mycobacterium bovis BCG	33892	PRJEB8560	294541	Terrabacteria group	Actinobacteria	4.31178	65.6	-	CUWN01	1	4184	3977	9/1/15	4/4/17	Scaffold	KAUST	SAMEA3257672	GCA_001287005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/005/GCA_001287005.1_bcg_Phipps	-	Phipps
Mycobacterium avium subsp. hominissuis 3388	1160712	PRJNA88489	88489	Terrabacteria group	Actinobacteria	5.0519	69.2	-	AWNJ01	128	4790	4535	6/2/14	4/2/17	Contig	Oregon State University	SAMN02756837	GCA_000696775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/775/GCA_000696775.1_Maq_reference_guided_assembly	-	3388
Clostridium perfringens	1502	PRJNA327106	327106	Terrabacteria group	Firmicutes	3.4172	28.3	-	MKXR01	31	-	-	12/22/16	12/22/16	Contig	None	SAMN05509317	GCA_001913905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/905/GCA_001913905.1_ASM191390v1	-	-
Xanthomonas campestris pv. musacearum 'Kenyan'	1075759	PRJNA71795	71795	Proteobacteria	Gammaproteobacteria	4.90794	63.1	-	AGFQ01	510	-	-	11/2/11	1/8/14	Scaffold	International Institute of Tropical Agriculture	SAMN02470061	GCA_000233635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/635/GCA_000233635.1_XCM_Kenyan_1.0	-	Kenyan
Lactococcus lactis subsp. lactis	1360	PRJNA294255	294255	Terrabacteria group	Firmicutes	2.61922	34.9	-	LKLH01	192	2698	2484	12/4/15	4/4/17	Contig	Radboudumc	SAMN04023416	GCA_001456505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/505/GCA_001456505.1_ASM145650v1	-	KF24
Bacillus cereus BDRD-ST196	526976	PRJNA29663	29663	Terrabacteria group	Firmicutes	5.57657	35.2	chromosome:NZ_CM000725.1/CM000725.1	ACMD01	1	11484	10936	4/30/09	6/15/17	Chromosome	Naval Medical Research Center	SAMN00727652	GCA_000161095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/095/GCA_000161095.1_ASM16109v1	22645259	BDRD-ST196
Staphylococcus epidermidis NIHLM039	979209	PRJNA62365	62365	Terrabacteria group	Firmicutes	2.52373	31.9	-	AKGS01	66	2527	2332	7/9/12	3/23/17	Contig	NISC - NIH Intramural Sequencing Center	SAMN00993248	GCA_000276345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/345/GCA_000276345.1_ASM27634v1	-	NIHLM039
Streptococcus agalactiae	1311	PRJNA395243	395243	Terrabacteria group	Firmicutes	2.15394	35.5	chromosome:NZ_CP022537.1/CP022537.1	-	1	2224	2034	9/11/17	9/13/17	Complete Genome	Griffith University	SAMN07374522	GCA_002289205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/205/GCA_002289205.1_ASM228920v1	-	874391
Yersinia pestis subsp. microtus bv. Caucasica	385966	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.56007	47.6	-	LIZE01	204	4312	3934	9/21/15	3/26/17	Scaffold	SRCAMB	SAMN03861512	GCA_001294915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/915/GCA_001294915.1_ASM129491v1	26634751	SCPM-O-B-6536
Pseudomonas fluorescens	294	PRJNA283445	283445	Proteobacteria	Gammaproteobacteria	4.84501	58.7	-	LCYT01	57	4491	4310	6/5/15	4/3/17	Contig	"University of Michigan, Ann Arbor"	SAMN03650286	GCA_001020635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/635/GCA_001020635.1_ASM102063v1	-	AU7350
Streptococcus agalactiae	1311	PRJNA293392	293392	Terrabacteria group	Firmicutes	2.11681	35.5	chromosome:NZ_CP021865.1/CP021865.1	-	1	2221	2063	6/16/17	6/21/17	Complete Genome	Singapore Streptococcus agalactiae working group	SAMN05384208	GCA_002197245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/245/GCA_002197245.1_ASM219724v1	28475781	SG-M50
Streptococcus agalactiae	1311	PRJNA293392	293392	Terrabacteria group	Firmicutes	2.11681	35.5	chromosome:NZ_CP021864.1/CP021864.1	-	1	2221	2064	6/16/17	6/21/17	Complete Genome	Singapore Streptococcus agalactiae working group	SAMN05384089	GCA_002197265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/265/GCA_002197265.1_ASM219726v1	28475781	SG-M158
Streptococcus agalactiae	1311	PRJNA293392	293392	Terrabacteria group	Firmicutes	2.11677	35.5	chromosome:NZ_CP021866.1/CP021866.1	-	1	2221	2062	6/16/17	6/21/17	Complete Genome	Singapore Streptococcus agalactiae working group	SAMN05384163	GCA_002197285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/285/GCA_002197285.1_ASM219728v1	28475781	SG-M29
Streptococcus agalactiae	1311	PRJNA293392	293392	Terrabacteria group	Firmicutes	2.07201	35.5	chromosome:NZ_CP021870.1/CP021870.1	-	1	2133	1980	6/16/17	6/21/17	Complete Genome	Singapore Streptococcus agalactiae working group	SAMN05384060	GCA_002197385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/385/GCA_002197385.1_ASM219738v1	28475781	SG-M4
Streptococcus agalactiae	1311	PRJNA293392	293392	Terrabacteria group	Firmicutes	2.11681	35.5	chromosome:NZ_CP021863.1/CP021863.1	-	1	2221	2063	6/16/17	6/21/17	Complete Genome	Singapore Streptococcus agalactiae working group	SAMN05384092	GCA_002197425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/425/GCA_002197425.1_ASM219742v1	28475781	SG-M163
Streptococcus agalactiae	1311	PRJEB18603	386975	Terrabacteria group	Firmicutes	2.17028	35.5	chromosome I:NZ_LT714196.1/LT714196.1	-	1	2283	2094	5/18/17	5/24/17	Complete Genome	INSTITUT PASTEUR	SAMEA46071418	GCA_900155855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/855/GCA_900155855.1_BM110	-	-
Pseudomonas fluorescens	294	PRJNA283449	283449	Proteobacteria	Gammaproteobacteria	4.83951	58.7	-	LCYX01	61	4489	4307	6/5/15	4/3/17	Contig	"University of Michigan, Ann Arbor"	SAMN03650290	GCA_001020645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/645/GCA_001020645.1_ASM102064v1	-	AU11235
Yersinia pestis subsp. microtus bv. Altaica	385967	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.57549	47.5	-	LIYV01	223	4321	3910	9/21/15	3/26/17	Scaffold	SRCAMB	SAMN03839881	GCA_001294965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/965/GCA_001294965.1_ASM129496v1	26634751	SCPM-O-B-7812
Nonlabens sediminis	319236	PRJNA355348	355348	FCB group	Bacteroidetes/Chlorobi group	2.83571	35.5	chromosome:NZ_CP019342.1/CP019342.1	-	1	2607	2486	5/2/17	5/6/17	Complete Genome	"Atmosphere and Ocean Research Institute, The University of Tokyo"	SAMN06075339	GCA_002117085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/085/GCA_002117085.1_ASM211708v1	-	NBRC 100970
Staphylococcus epidermidis NIHLM040	979208	PRJNA62363	62363	Terrabacteria group	Firmicutes	2.5578	31.9	-	AKGR01	62	2527	2304	7/9/12	3/23/17	Contig	NISC - NIH Intramural Sequencing Center	SAMN00993236	GCA_000276365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/365/GCA_000276365.1_ASM27636v1	-	NIHLM040
Bacillus cereus BDRD-Cer4	526978	PRJNA29667	29667	Terrabacteria group	Firmicutes	5.39745	35.1	chromosome:NZ_CM000726.1/CM000726.1	ACME01	1	11234	10874	4/30/09	5/18/17	Chromosome	Naval Medical Research Center	SAMN00727651	GCA_000161115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/115/GCA_000161115.1_ASM16111v1	22645259	BDRD-Cer4
Lactococcus lactis subsp. lactis	1360	PRJNA294255	294255	Terrabacteria group	Firmicutes	2.44552	34.7	-	LKLF01	61	2423	2259	12/4/15	4/4/17	Contig	Radboudumc	SAMN04023371	GCA_001456525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/525/GCA_001456525.1_ASM145652v1	-	K337
Xanthomonas campestris pv. musacearum NCPPB 4384	1094186	PRJNA73881	73881	Proteobacteria	Gammaproteobacteria	4.74178	63.1	-	AKBH01	84	4875	4556	7/17/12	7/22/14	Scaffold	University of Exeter	SAMN00991244	GCA_000277935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/935/GCA_000277935.1_Xcm4384v1	24704974	NCPPB 4384
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.2748	69	-	LNBS01	480	5109	4667	4/4/16	4/5/17	Contig	Robert Koch Institute	SAMN04226740	GCA_001610145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/145/GCA_001610145.1_ASM161014v1	-	MAHP-883
Mycobacterium bovis BCG	33892	PRJEB8560	294541	Terrabacteria group	Actinobacteria	4.28435	65.5	-	CUWK01	1	4218	3983	9/2/15	4/4/17	Scaffold	KAUST	SAMEA3257670	GCA_001287045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/045/GCA_001287045.1_bcg_Moreau	-	Moreau
Haemophilus influenzae	727	PRJNA285211	285211	Proteobacteria	Gammaproteobacteria	1.83967	38	-	LFDP01	24	1869	1747	7/21/15	3/26/17	Contig	University of Oklahoma Health Sciences Center	SAMN03702698	GCA_001184695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/695/GCA_001184695.1_ASM118469v1	26390432	HI1373
Clostridium formicaceticum	1497	PRJNA380994	380994	Terrabacteria group	Firmicutes	4.58673	35.5	chromosome:NZ_CP020559.1/CP020559.1	-	1	4288	4047	4/6/17	4/8/17	Complete Genome	Georg-August-University Goettingen	SAMN06660676	GCA_002080475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/475/GCA_002080475.1_ASM208047v1	-	DSM 92
Elizabethkingia endophytica	1606016	PRJNA326741	326741	FCB group	Bacteroidetes/Chlorobi group	4.18451	35.5	chromosome:NZ_CP016372.1/CP016372.1	-	1	3824	3690	3/6/17	3/8/17	Complete Genome	CDC	SAMN05255122	GCA_002022045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/045/GCA_002022045.1_ASM202204v1	-	JM-87
Streptococcus pneumoniae PNI0446	1159102	PRJNA89207	89207	Terrabacteria group	Firmicutes	2.09699	39.7	-	AKRL01	159	2377	2033	1/29/13	3/8/17	Scaffold	Washington University	SAMN02299534	GCA_000334855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/855/GCA_000334855.1_ASM33485v1	-	PNI0446
Clostridium formicaceticum	1497	PRJNA345142	345142	Terrabacteria group	Firmicutes	4.58676	35.5	chromosome:NZ_CP017603.1/CP017603.1	-	1	4293	4042	10/26/16	4/13/17	Complete Genome	The Ohio State University	SAMN05858599	GCA_001854185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/185/GCA_001854185.1_ASM185418v1	-	ATCC 27076
Streptococcus agalactiae	1311	PRJNA323652	323652	Terrabacteria group	Firmicutes	1.83899	35.5	chromosome:CP015976.1	-	1	1880	1640	6/3/16	6/3/16	Complete Genome	Londrina State University	SAMN05185185	GCA_001655175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/175/GCA_001655175.1_ASM165517v1	-	S25
Streptococcus pyogenes HKU QMH11M0907901	1048264	PRJNA68183	68183	Terrabacteria group	Firmicutes	1.9081	38.5	chromosome:NZ_AFRY01000001.1/AFRY01000001.1	AFRY01	1	1934	1803	5/18/12	3/23/17	Chromosome	"Department of Microbiology, The University of Hong Kong"	SAMN02471172	GCA_000275625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/625/GCA_000275625.1_ASM27562v1	-	HKU QMH11M0907901
Leptospira interrogans serovar Grippotyphosa str. 2006006986	1193017	PRJNA167227	167227	Spirochaetes	Spirochaetia	4.93599	35.1	-	AKXC02	60	4501	4050	10/17/12	5/19/17	Contig	J. Craig Venter Institute	SAMN02436575	GCA_000306925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/925/GCA_000306925.2_gls454020v2.0	-	2006006986
Pseudomonas putida	303	PRJNA382790	382790	Proteobacteria	Gammaproteobacteria	6.76666	62.1	-	NFSB01	91	6299	6029	5/25/17	5/31/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN06720480	GCA_002157515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/515/GCA_002157515.1_ASM215751v1	-	1312
Bacillus anthracis str. Western North America USA6153	212045	PRJNA337	337	Terrabacteria group	Firmicutes	5.51135	35.2	-	AAER01	44	6163	5728	6/4/04	6/19/17	Scaffold	J. Craig Venter Institute	SAMN02435885	GCA_000167315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/315/GCA_000167315.1_ASM16731v1	-	Western North America USA6153
Shigella flexneri	623	PRJNA315925	315925	Proteobacteria	Gammaproteobacteria	4.60191	50.3	-	LVIJ01	733	5176	4248	5/20/16	3/5/17	Contig	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04570177	GCA_001648955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/955/GCA_001648955.1_ASM164895v1	-	BJ4s05
Bifidobacterium longum	216816	PRJNA379831	379831	Terrabacteria group	Actinobacteria	2.47439	59.9	-	NAQB01	41	2190	1990	3/31/17	4/6/17	Contig	University of Parma	SAMN06621716	GCA_002075875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/875/GCA_002075875.1_Bbif1898B	-	1898B
Nonlabens sp. MIC269	1476901	PRJNA282571	282571	FCB group	Bacteroidetes/Chlorobi group	2.88429	35.5	chromosome:NZ_CP011373.1/CP011373.1	-	1	2636	2547	11/3/15	4/11/17	Complete Genome	Korea Institute of Ocean Science and Technology	SAMN03571531	GCA_001430865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/430/865/GCA_001430865.1_ASM143086v1	-	MIC269
Streptococcus agalactiae	1311	PRJNA293392	293392	Terrabacteria group	Firmicutes	2.11681	35.5	chromosome:NZ_CP012419.2/CP012419.2	-	1	2219	2054	8/31/15	3/18/17	Complete Genome	Singapore Streptococcus agalactiae working group	SAMN04002524	GCA_001275545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/545/GCA_001275545.2_ASM127554v2	26494662	SG-M1
Streptococcus agalactiae	1311	PRJNA244605	244605	Terrabacteria group	Firmicutes	2.10501	35.5	-	JMBI01	66	2143	2043	6/27/14	3/16/17	Scaffold	"Faculty of Veterinary Science, Chulalongkorn University"	SAMN02727744	GCA_000715295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/295/GCA_000715295.1_StrAga1.0	25502682	FNA07
Streptococcus suis 92-1191	1214175	PRJNA171435	171435	Terrabacteria group	Firmicutes	2.35428	41.3	-	ALLN01	165	2332	2144	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469525	GCA_000440695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/695/GCA_000440695.1_version1	-	92-1191
Pseudomonas syringae pv. actinidiae str. Shaanxi_M228	1108972	PRJNA76165	76165	Proteobacteria	Gammaproteobacteria	6.34745	58.4	-	ANJI02	419	6125	5558	3/5/13	3/24/17	Contig	University of Otago	SAMN02471925	GCA_000344475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/475/GCA_000344475.2_Pseudomonas_syringae_pv._actinidiae_str._Shaanxi_M228_V02	23555547	Shaanxi_M228
Vibrio vulnificus	672	PRJNA355116	355116	Proteobacteria	Gammaproteobacteria	5.08898	46.5	-	NPFH01	149	4906	4602	8/30/17	9/1/17	Contig	FDA	SAMN06062372	GCA_002278415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/415/GCA_002278415.1_ASM227841v1	-	WAPHLVBRA00003
Bacillus licheniformis	1402	PRJNA270588	270588	Terrabacteria group	Firmicutes	4.09491	46.2	-	LQYQ01	35	4211	4047	3/11/16	4/5/17	Scaffold	University of Groningen	SAMN04390292	GCA_001587355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/355/GCA_001587355.1_B4164	27174261	B4164
Streptococcus agalactiae	1311	PRJNA263907	263907	Terrabacteria group	Firmicutes	1.99615	35.5	chromosome:NZ_CP010319.1/CP010319.1	-	1	2040	1912	8/11/15	3/18/17	Complete Genome	UFMG	SAMN03108598	GCA_001266635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/635/GCA_001266635.1_ASM126663v1	27274785	GBS85147
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.79975	50.6	-	CXKS01	398	5465	4652	7/16/15	2/24/17	Contig	SC	SAMEA2003918	GCA_001259095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/095/GCA_001259095.1_8290_4_49	-	109171
Bacteroides fragilis str. 3986 N(B)22	1339305	PRJNA206148	206148	FCB group	Bacteroidetes/Chlorobi group	5.05071	43.2	-	JGEI01	31	4451	4202	3/20/14	4/18/17	Contig	IGS	SAMN02314545	GCA_000598945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/945/GCA_000598945.1_ASM59894v1	-	3986 N(B)22
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.187	38.7	-	NGPF01	147	2220	1994	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848399	GCA_002253725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/725/GCA_002253725.1_ASM225372v1	-	601g
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.08836	67	-	MUQH01	137	7763	7335	2/10/17	3/30/17	Contig	University of British Columbia	SAMN05001815	GCA_001991455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/455/GCA_001991455.1_ASM199145v1	-	VC7945
Streptococcus agalactiae	1311	PRJNA254961	254961	Terrabacteria group	Firmicutes	1.84065	35.5	chromosome:CP011328.1	-	1	1875	1613	8/3/15	8/3/15	Complete Genome	GUANGXI ACADEMY OF FISHERY SCIENCES	SAMN02906739	GCA_001190865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/190/865/GCA_001190865.1_ASM119086v1	-	GX026
Streptococcus agalactiae	1311	PRJNA274384	274384	Terrabacteria group	Firmicutes	2.09207	35.5	chromosome:NZ_CP010867.1/CP010867.1	-	1	2173	2008	6/3/15	3/17/17	Complete Genome	Baylor College of Medicine	SAMN03329971	GCA_001026925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/925/GCA_001026925.1_ASM102692v1	25941374	SS1
Burkholderia mallei	13373	PRJNA257008	257008	Proteobacteria	Betaproteobacteria	5.02569	68.6	-	LUFN01	233	5329	4929	4/4/16	4/5/17	Contig	µFORGE	SAMN04260154	GCA_001608455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/455/GCA_001608455.1_BMAL006-SEQ-1-ASM-1	-	BURK080
Bacillus thuringiensis	1428	PRJNA237997	237997	Terrabacteria group	Firmicutes	5.81846	35	-	JEOF01	162	6291	5843	3/20/14	4/18/17	Scaffold	Hubei Academy of Agricultural Sciences	SAMN02640274	GCA_000600315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/315/GCA_000600315.1_Newbler2.5.3	24855295	NBIN-866
Ralstonia solanacearum CaRs-Mep	1335617	PRJNA203439	203439	Proteobacteria	Betaproteobacteria	5.71855	67	-	MCBM01	253	5139	4753	10/27/16	4/5/17	Contig	ICAR	SAMN02152298	GCA_001855495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/495/GCA_001855495.1_ASM185549v1	-	CaRs-Mep
Vibrio cholerae HC-48B2	991966	PRJNA63939	63939	Proteobacteria	Gammaproteobacteria	4.02482	47.5	-	AGUR01	166	3839	3664	11/4/11	3/22/17	Scaffold	Institute for Genome Sciences	SAMN00262259	GCA_000234865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/865/GCA_000234865.1_ASM23486v1	-	HC-48B2
Clostridioides difficile	1496	PRJNA275031	275031	Terrabacteria group	Firmicutes	4.22533	29.1	-	JYNK01	20	3988	3529	3/10/15	4/21/17	Scaffold	Zhejiang Provincial Center for Disease Control and Prevention	SAMN03338720	GCA_000949855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/855/GCA_000949855.1_ASM94985v1	26823648	ZJCDC-S82
Shigella boydii	621	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.75983	50.7	-	NQDC01	158	5135	4645	9/20/17	9/22/17	Contig	JCVI	SAMN07450652	GCA_002317935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/935/GCA_002317935.1_ASM231793v1	-	ECFood+03
Francisella tularensis subsp. tularensis 70102010	1210518	PRJNA170747	170747	Proteobacteria	Gammaproteobacteria	1.81702	32.3	-	AMPY01	28	1878	1590	10/16/12	3/30/17	Contig	Dugway Proving Ground	SAMN02469756	GCA_000305835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/835/GCA_000305835.1_ASM30583v1	-	70102010
Brucella abortus 63/294	1160181	PRJNA173575	173575	Proteobacteria	Alphaproteobacteria	3.28563	57.2	-	AQIY01	32	3360	3061	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00811181	GCA_000370065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/065/GCA_000370065.1_Bruc_abor_63_294_V1	-	63/294
Xanthomonas citri subsp. citri	611301	PRJEB7161	306118	Proteobacteria	Gammaproteobacteria	5.39821	64.6	-	CCWG01	55	5110	5027	12/16/15	12/16/15	Scaffold	Genoscope CEA	SAMEA2752279	GCA_001494775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/775/GCA_001494775.1_ASX_B_PRJEB7161_v1	-	-
Campylobacter fetus subsp. fetus	32019	PRJEB8721	292173	Proteobacteria	delta/epsilon subdivisions	1.75646	33.8	-	FAUV01	14	1857	1750	11/29/15	4/4/17	Scaffold	SC	SAMEA3310289	GCA_001486945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/486/945/GCA_001486945.1_17150_1_76	-	006A-0063
Xanthomonas oryzae pv. oryzae	64187	PRJNA269424	269424	Proteobacteria	Gammaproteobacteria	4.24556	63.9	-	JXEU01	432	4206	3404	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252539	GCA_001927785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/785/GCA_001927785.1_ASM192778v1	-	DXO-131
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.0723	38.1	-	MLKR01	572	2081	1719	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297005	GCA_001867405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/405/GCA_001867405.1_ASM186740v1	27118061	AWRIB1063
Streptococcus mitis 11/5	1239792	PRJNA176680	176680	Terrabacteria group	Firmicutes	1.87525	40.3	-	AQTT01	69	1824	1796	4/30/13	1/8/14	Contig	"Research Institute of Physical-Chemical Medicine, Moscow, Russia"	SAMN02470837	GCA_000385815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/815/GCA_000385815.1_ASM38581v1	-	5-Nov
Vibrio parahaemolyticus	670	PRJNA288141	288141	Proteobacteria	Gammaproteobacteria	5.22438	45.2	-	LFWJ01	83	5010	4764	8/17/15	3/18/17	Scaffold	Health Canada	SAMN03795184	GCA_001268005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/005/GCA_001268005.1_ASM126800v1	-	S195-7
Streptococcus agalactiae	1311	PRJNA246096	246096	Terrabacteria group	Firmicutes	2.22121	35.5	chromosome:NZ_CP007631.1/CP007631.2	-	1	2314	2138	7/17/14	3/16/17	Complete Genome	Public Health Ontario	SAMN02741687	GCA_000730215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/215/GCA_000730215.2_ASM73021v2	-	NGBS061
Streptococcus agalactiae	1311	PRJNA246096	246096	Terrabacteria group	Firmicutes	2.06143	35.5	chromosome:NZ_CP007632.1/CP007632.1	-	1	2127	1967	7/17/14	3/16/17	Complete Genome	Public Health Ontario	SAMN02741688	GCA_000730255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/255/GCA_000730255.1_ASM73025v1	-	NGBS572
Clostridium botulinum CDC54085	1435054	PRJNA231043	231043	Terrabacteria group	Firmicutes	4.09576	28	-	AZRQ01	345	4079	3574	2/25/14	3/24/17	Contig	Centers for Disease Control and Prevention	SAMN02951881	GCA_000582435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/435/GCA_000582435.1_CDC54085.1	24632257	CDC54085
Enterococcus faecalis Fly1	565649	PRJNA32945	32945	Terrabacteria group	Firmicutes	2.83429	37.5	-	ACAR01	12	2769	2629	6/15/09	3/22/17	Scaffold	Broad Institute	SAMN02595262	GCA_000157415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/415/GCA_000157415.1_ASM15741v1	-	Fly1
Streptococcus mutans TCI-264	1074177	PRJNA72093	72093	Terrabacteria group	Firmicutes	1.8246	37	-	AGMD01	137	1858	1754	10/6/11	3/22/17	Contig	JCVI	SAMN02436438	GCA_000229765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/765/GCA_000229765.2_SMUT7-NEX_6-264	-	TCI-264
Neisseria gonorrhoeae SK36809	1351776	PRJNA209468	209468	Proteobacteria	Betaproteobacteria	2.13249	52.4	-	ATPZ01	490	2534	2126	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02338800	GCA_001026225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/225/GCA_001026225.1_ASM102622v1	-	SK36809
Enterococcus faecium P1986	1134833	PRJNA82055	82055	Terrabacteria group	Firmicutes	2.98614	37.6	-	AMAK01	267	3100	2927	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299508	GCA_000294975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/975/GCA_000294975.2_ASM29497v2	-	P1986
Chlamydia psittaci 02DC14	1112253	PRJNA77079	77079	PVC group	Chlamydiae	1.35962	38.6	-	ATMU01	458	1792	1748	6/27/13	11/19/13	Scaffold	University of Maryland School of Medicine	SAMN00860203	GCA_000417565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/565/GCA_000417565.1_ASM41756v1	-	02DC14
Stenotrophomonas maltophilia	40324	PRJNA299451	299451	Proteobacteria	Gammaproteobacteria	4.51217	66.3	-	LLXW01	173	4180	4031	11/4/15	3/27/17	Contig	CSIR-Institute of Microbial Technology	SAMN04207869	GCA_001431675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/675/GCA_001431675.1_ASM143167v1	27014232	LMG 22072
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.13778	41.2	-	CVZB01	82	2083	1895	6/23/15	3/26/17	Contig	SC	SAMEA1032813	GCA_001176025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/025/GCA_001176025.1_6830_4_93	-	EQUI0238
Pasteurella multocida subsp. multocida	44283	PRJNA300368	300368	Proteobacteria	Gammaproteobacteria	2.27083	40.3	-	LUDA01	18	2140	2052	6/20/16	4/5/17	Scaffold	Sichuan Agricultural University	SAMN04219571	GCA_001670435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/670/435/GCA_001670435.1_ASM167043v1	-	ATCC 11039
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	3.01877	46.6	-	JTIA01	390	3235	2755	6/3/16	4/10/17	Contig	Wageningen University	SAMN03196632	GCA_001656585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/585/GCA_001656585.1_ASM165658v1	-	Lrh29
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31267	57.2358	chromosome 1:NZ_CP018528.1/CP018528.1; chromosome 2:NZ_CP018529.1/CP018529.1	-	2	3373	3146	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932979	GCA_002192115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/115/GCA_002192115.1_ASM219211v1	28388689	BwIM_SYR_31
Bacillus cereus	1396	PRJNA248730	248730	Terrabacteria group	Firmicutes	5.22366	35.5	chromosome:CP008712.1	-	1	4404	4278	7/10/14	5/13/15	Complete Genome	University of Brasilia	SAMN02801763	GCA_000724585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/585/GCA_000724585.1_ASM72458v1	-	FT9
Bordetella bronchiseptica MBORD762	1331233	PRJNA202145	202145	Proteobacteria	Betaproteobacteria	5.28042	68.2	-	JHBR01	63	5013	4905	5/13/14	4/2/17	Contig	JCVI	SAMN02231431	GCA_000690635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/635/GCA_000690635.1_gbb37v01	25908122	MBORD762
Corynebacterium diphtheriae	1717	PRJNA359742	359742	Terrabacteria group	Actinobacteria	2.41949	53.5	-	MSTA01	85	2335	1957	1/5/17	4/10/17	Contig	"CMC, Vellore"	SAMN06197335	GCA_001937335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/335/GCA_001937335.1_ASM193733v1	-	WD65
Mycoplasma pneumoniae	2104	PRJNA291007	291007	Terrabacteria group	Tenericutes	0.821185	40.1	-	LHPO01	13	804	705	9/22/15	4/4/17	Scaffold	Centre for genomic regulation (CRG)	SAMN03897299	GCA_001296485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/485/GCA_001296485.1_ASM129648v1	26335586	Mympn_1145
Yersinia enterocolitica	630	PRJEB13626	384942	Proteobacteria	Gammaproteobacteria	4.42198	46.9	-	FKKW01	150	4199	3911	5/1/17	5/9/17	Contig	IP	SAMEA3935393	GCA_900079825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/825/GCA_900079825.1_IP35464	-	-
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.0792	41.6	-	JJQX01	260	3547	3274	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708972	GCA_000980105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/105/GCA_000980105.1_gtlEnvA5udCFS	25756680	1.H.M.2.4
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.11393	59.3	-	JVXI01	144	4816	4686	7/10/15	3/26/17	Contig	University of Washington	SAMN03197208	GCA_001060655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/655/GCA_001060655.1_ASM106065v1	26230489	1242_SMAR
Lactobacillus plantarum WJL	1350466	PRJNA209589	209589	Terrabacteria group	Firmicutes	3.47749	44.2	-	AUTE01	102	3408	3229	10/18/13	3/24/17	Contig	Seoul National University	SAMN02470914	GCA_000474695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/695/GCA_000474695.1_Lactobacillus_plantarum_WJL_genome_Assembly	24265491	WJL
Mannheimia haemolytica	75985	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.60473	41	-	LQFK01	70	2680	2531	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366558	GCA_001930735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/735/GCA_001930735.1_ASM193073v1	-	3045MH
Campylobacter coli LMG 23336	887303	PRJNA52743	52743	Proteobacteria	delta/epsilon subdivisions	1.64817	31.4	-	AINM01	120	1706	1621	3/16/12	3/15/17	Contig	Cornell University	SAMN02429062	GCA_000254015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/015/GCA_000254015.2_ASM25401v2	-	LMG 23336
Burkholderia sp. LA-2-3-30-S1-D2	1637862	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.02478	66.4	-	LOVX01	135	6576	6206	1/21/16	4/11/17	Contig	Northern Arizona University	SAMN03449215	GCA_001523915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/523/915/GCA_001523915.1_ASM152391v1	-	LA-2-3-30-S1-D2
Propionibacterium acnes HL056PA1	765119	PRJNA49273	49273	Terrabacteria group	Actinobacteria	2.47365	60.1	-	ADYI01	32	2513	2381	8/4/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189227	GCA_000145095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/095/GCA_000145095.1_ASM14509v1	-	HL056PA1
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.52128	32.6	-	CUFF01	74	2483	2359	3/31/15	3/26/17	Contig	SC	SAMEA1035031	GCA_001233865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/865/GCA_001233865.1_7068_7_12	-	708075
Proteus mirabilis	584	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.92314	38.6	-	JVFU01	85	3594	3451	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197664	GCA_001065085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/085/GCA_001065085.1_ASM106508v1	26230489	47_PMIR
Enterobacter cloacae	550	PRJNA300355	300355	Proteobacteria	Gammaproteobacteria	4.81552	55.6	-	LMBL01	6	4651	4285	12/18/15	3/27/17	Scaffold	"Graduate School at Shenzhen, Tsinghua University"	SAMN04219575	GCA_001469415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/415/GCA_001469415.1_ASM146941v1	26981407	ST3
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.08938	55	-	FLAD01	44	5935	5640	5/19/16	2/21/17	Scaffold	SC	SAMEA2273521	GCA_900083735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/735/GCA_900083735.1_12045_5_89	-	2880STDY5682436
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.57187	56.7	-	MRXS01	35	4430	4231	3/31/17	4/3/17	Contig	FDA/CFSAN	SAMN06124508	GCA_002075725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/725/GCA_002075725.1_ASM207572v1	-	MOD1-32B1C
Lactobacillus salivarius	1624	PRJNA357984	357984	Terrabacteria group	Firmicutes	2.03546	32.9	-	NBEQ01	103	2024	1873	4/5/17	4/8/17	Scaffold	University College Cork	SAMN06163257	GCA_002079645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/645/GCA_002079645.1_ASM207964v1	-	CCuG47171
Mycobacterium abscessus subsp. bolletii 2B-1231	1001709	PRJNA65149	65149	Terrabacteria group	Actinobacteria	4.81126	64.2	-	AKUO01	9	4814	4706	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00672644	GCA_000270925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/925/GCA_000270925.1_ASM27092v1	-	2B-1231
Vibrio sp. V08_P9A1T1	1938663	PRJNA361511	361511	Proteobacteria	Gammaproteobacteria	3.65027	44.9	-	NDID01	316	3365	3164	8/4/17	8/6/17	Scaffold	Instituto de ecologia	SAMN06251404	GCA_002241195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/195/GCA_002241195.1_ASM224119v1	-	V08_P9A1T1
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.68395	63.9	-	DBUQ01	51	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06452549	GCA_002307985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/985/GCA_002307985.1_ASM230798v1	28894102	-
Aeromonas hydrophila	644	PRJDB1739	248280	Proteobacteria	Gammaproteobacteria	4.7051	61.6	-	BAXY01	28	-	-	5/21/14	7/2/14	Contig	The University of Tokyo	SAMD00000402	GCA_000698205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/205/GCA_000698205.1_ASM69820v1	24926056	Ae34
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.58335	67.3	-	LPAL01	133	6939	6552	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449348	GCA_001526735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/735/GCA_001526735.1_ASM152673v1	-	MSMB1601WGS
Streptococcus agalactiae	1311	PRJNA226756	226756	Terrabacteria group	Firmicutes	1.83813	35.5	chromosome:CP007565.1	-	1	1825	1590	4/23/14	5/20/14	Complete Genome	"USDA, ARS, AAHRU"	SAMN02721568	GCA_000636115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/115/GCA_000636115.1_ASM63611v1	-	138spar
Yersinia ruckeri	29486	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	3.8188	47.4	-	CQBN01	60	3508	3324	3/23/15	4/3/17	Scaffold	SC	SAMEA859855	GCA_001166725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/725/GCA_001166725.1_4840_7_6	-	RS41
Lactobacillus paracasei subsp. paracasei Lpp123	1256201	PRJNA178428	178428	Terrabacteria group	Firmicutes	2.81504	46.1	-	ANJW01	1107	3306	3283	6/11/13	11/13/14	Contig	Danone Research	SAMN02469719	GCA_000409975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/975/GCA_000409975.1_ASM40997v1	23894338	Lpp123
Streptococcus oralis subsp. oralis	1891914	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.98758	41.2	-	NCUT01	30	2029	1915	4/18/17	4/21/17	Scaffold	Slagelse Hospital	SAMN06705615	GCA_002096195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/195/GCA_002096195.1_ASM209619v1	27325438	B_007274_11
Klebsiella variicola	244366	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	5.42011	57.5	-	DBMQ01	41	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452255	GCA_002304815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/815/GCA_002304815.1_ASM230481v1	28894102	-
Pseudoalteromonas sp. TB64	1938600	PRJNA202416	202416	Proteobacteria	Gammaproteobacteria	4.84368	37.9	-	AUTQ01	275	4497	3945	11/20/13	4/9/17	Scaffold	University of Florence	SAMN02260218	GCA_000498095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/095/GCA_000498095.1_TB64	28095778	TB64
Streptococcus agalactiae 138P	1417990	PRJNA226756	226756	Terrabacteria group	Firmicutes	1.8387	35.5	chromosome:CP007482.1	-	1	1831	1593	3/25/14	4/21/14	Complete Genome	"USDA, ARS, AAHRU"	SAMN02689812	GCA_000599965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/965/GCA_000599965.1_ASM59996v1	-	138P
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	3.93812	38.7	-	MDHU01	166	3843	3633	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022855	GCA_001706115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/115/GCA_001706115.1_ASM170611v1	-	UKK-0250
Citrobacter freundii	546	PRJNA252011	252011	Proteobacteria	Gammaproteobacteria	5.25145	51.5	-	JRTP01	192	5238	4978	10/26/15	4/4/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02872798	GCA_001413335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/335/GCA_001413335.1_ASM141333v1	25501822	RU2 BHI22
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.27757	54.7	-	JZXT01	126	5324	5053	3/19/15	3/25/17	Contig	JCVI	SAMN03283667	GCA_000957325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/325/GCA_000957325.1_ASM95732v1	-	44565
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.122	55.1	-	LDBU01	44	5020	4793	5/21/15	4/6/17	Contig	JCVI	SAMN03495957	GCA_001011575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/575/GCA_001011575.1_ASM101157v1	-	GN03927
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.8704	64.2	-	FVVT01	10	4843	4703	3/10/17	3/18/17	Contig	SC	SAMEA2148691	GCA_900140175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/175/GCA_900140175.1_10665_2_69	-	523
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.31521	66.7	-	LPDA01	107	7827	7388	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449419	GCA_001528685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/685/GCA_001528685.1_ASM152868v1	-	MSMB1062WGS
Pseudomonas sp. PTA1	1500297	PRJNA247540	247540	Proteobacteria	Gammaproteobacteria	6.09429	59.7	-	JQJQ01	42	5562	5368	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02787058	GCA_000745605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/745/605/GCA_000745605.1_ASM74560v1	-	PTA1
Streptomyces sp. Amel2xE9	1157634	PRJNA169737	169737	Terrabacteria group	Actinobacteria	8.25244	72.9	-	ARPE01	70	7244	6854	4/25/13	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441313	GCA_000383935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/935/GCA_000383935.1_ASM38393v1	-	Amel2xE9
Bacillus sp. Root147	1736468	PRJNA297942	297942	Terrabacteria group	Firmicutes	5.62389	37.6	-	LMJR01	27	5809	5467	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155737	GCA_001429365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/365/GCA_001429365.1_Root147	26633631	Root147
Acinetobacter sp. TG27347	1221289	PRJNA172701	172701	Proteobacteria	Gammaproteobacteria	4.01675	38.6	-	AMIT01	90	3900	3726	10/2/12	4/6/17	Contig	Translational Genomics Research Institute	SAMN02471235	GCA_000301635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/635/GCA_000301635.1_ASM30163v1	-	TG27347
Clostridium sp. C105KSO13	1776045	PRJEB12102	308705	Terrabacteria group	Firmicutes	3.20801	42.6	-	FBWL01	172	3035	2862	1/9/16	8/1/17	Contig	UNIVERSITY OF WARWICK	SAMEA3721275	GCA_001517425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/425/GCA_001517425.1_C105KS013_ass	-	-
Sphingomonas sp. Leaf34	1736216	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	3.94383	65.8	-	LMLC01	6	3596	3480	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151596	GCA_001421805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/805/GCA_001421805.1_Leaf34	26633631	Leaf34
Synechococcus sp. TMED90	1986600	PRJNA385857	385857	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.78105	59.4	-	NHER01	87	1969	1869	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971944	GCA_002172935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/172/935/GCA_002172935.1_ASM217293v1	-	-
Rhodococcus sp. 06-156-3C	2022486	PRJNA395383	395383	Terrabacteria group	Actinobacteria	6.35708	64.3	-	NOYM01	46	5941	5808	8/18/17	8/21/17	Contig	Oregon State University	SAMN07376356	GCA_002258795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/795/GCA_002258795.1_ASM225879v1	-	06-156-3C
Enterobacter sp. SST3	1216470	PRJNA171535	171535	Proteobacteria	Gammaproteobacteria	4.62685	56	-	ALNS01	63	4489	4290	8/10/12	5/18/17	Contig	Rochester Institute of Technology	SAMN02470869	GCA_000286655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/655/GCA_000286655.1_ASM28665v1	23045495	SST3
Staphylococcus sp. HMSC057A08	1739385	PRJNA300035	300035	Terrabacteria group	Firmicutes	2.2869	31.4	-	LWQJ01	54	2265	2178	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480048	GCA_001812925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/925/GCA_001812925.1_ASM181292v1	-	HMSC057A08
Corynebacterium sp. HMSC063G05	1739255	PRJNA299905	299905	Terrabacteria group	Actinobacteria	2.40926	58.9	-	LTHQ01	37	2112	2030	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477569	GCA_001810555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/555/GCA_001810555.1_ASM181055v1	-	HMSC063G05
Arthrobacter sp. ATCC 21022	1771959	PRJNA257760	257760	Terrabacteria group	Actinobacteria	4.5521	63.4	-	JPWK01	48	4256	4051	1/20/16	4/11/17	Contig	Mount Saint Mary's University	SAMN02954666	GCA_001519005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/005/GCA_001519005.1_ASM151900v1	-	KY 3901
Bradyrhizobium sp. AT1	574934	PRJNA271718	271718	Proteobacteria	Alphaproteobacteria	7.53484	64.2	-	JXDL01	8	7029	6673	3/14/16	4/17/17	Scaffold	National Institute for Agro-Environmental Sciences	SAMN03276517	GCA_001590795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/590/795/GCA_001590795.1_ASM159079v1	-	AT1
Streptococcus sp. HMSC072C09	1739397	PRJNA300047	300047	Terrabacteria group	Firmicutes	2.1325	41.9	-	LTXE01	27	2103	1981	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480070	GCA_001813105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/105/GCA_001813105.1_ASM181310v1	-	HMSC072C09
Mycobacterium sp. GA-0227b	1772274	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.14811	66.9	-	LQIK01	34	4918	4778	1/6/16	4/11/17	Contig	JCVI	SAMN04349491	GCA_001499855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/855/GCA_001499855.1_ASM149985v1	-	GA-0227b
Prevotella sp. CAG:255	1262923	PRJEB791	206585	FCB group	Bacteroidetes/Chlorobi group	3.48512	45.7	-	CAWV01	109	2809	2771	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138447	GCA_000431195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/195/GCA_000431195.1_MGS255	-	-
Enterococcus sp. 5B3_DIV0040	1834182	PRJNA313452	313452	Terrabacteria group	Firmicutes	4.05664	42.5	-	NGLC01	3	3789	3563	5/16/17	5/24/17	Scaffold	Broad Institute	SAMN04634082	GCA_002140755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/755/GCA_002140755.1_ASM214075v1	-	5B3_DIV0040
Methylobacterium sp. L2-4	1166158	PRJNA194465	194465	Proteobacteria	Alphaproteobacteria	6.79654	70.8	-	AVNX01	382	-	-	8/23/13	1/30/15	Contig	Temasek Lifesciences Laboratory	SAMN02471039	GCA_000454305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/305/GCA_000454305.1_NA	25502683	L2-4
Paenibacillus sp. A3	1337054	PRJNA268053	268053	Terrabacteria group	Firmicutes	7.56358	53.6	-	JTHN01	441	7068	6505	10/19/15	4/11/17	Contig	CSIR-Institute of Microbial Technology	SAMN03202138	GCA_001399685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/685/GCA_001399685.1_ASM139968v1	26574006	A3
Thioalkalivibrio sp. ALJ7	1158756	PRJNA176575	176575	Proteobacteria	Gammaproteobacteria	2.71215	64.5	-	AQXQ01	12	2629	2501	4/22/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441736	GCA_000376865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/865/GCA_000376865.1_ASM37686v1	-	ALJ7
Bacteroides sp. CAG:98	1262754	PRJEB1045	206952	FCB group	Bacteroidetes/Chlorobi group	3.32077	42.2	-	CBKJ01	152	2697	2670	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138804	GCA_000438395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/395/GCA_000438395.1_MGS98	-	-
Prochlorococcus sp. scB245a_518A17	1471501	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.62527	31.3	-	JFMZ01	136	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671372	GCA_000634375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/375/GCA_000634375.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. BCW_4317	1904034	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.72909	30.2	-	MKAW01	87	1811	1638	10/4/16	4/13/17	Scaffold	University of California at Davis	SAMN03358045	GCA_001764555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/555/GCA_001764555.1_BCW_4317	27260356	BCW_4317
Neisseria sp. N95_16	2024408	PRJNA396839	396839	Proteobacteria	Betaproteobacteria	2.71131	49	-	NPKV01	573	2707	2369	8/31/17	9/2/17	Contig	Instituto Adolfo Lutz	SAMN07439669	GCA_002284555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/555/GCA_002284555.1_ASM228455v1	-	N95_16
Rhizobium sp. LCM 4573	1848291	PRJNA321049	321049	Proteobacteria	Alphaproteobacteria	5.52154	61.3	-	MDDW01	30	5456	5276	10/26/16	4/13/17	Contig	University of New Hampshire	SAMN04964198	GCA_001854865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/865/GCA_001854865.1_ASM185486v1	-	LCM 4573
Mesorhizobium sp. LSHC420B00	1287292	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	7.05155	62.1	-	AYVY01	90	7082	6384	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359682	GCA_000503055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/055/GCA_000503055.1_Mloti_LSHC420B00	-	LSHC420B00
Bacillus velezensis	492670	PRJNA323665	323665	Terrabacteria group	Firmicutes	4.04125	45.9	-	LZZN01	36	4083	3881	7/18/16	3/22/17	Contig	Microbial Institute for Fermentation Industry	SAMN05185284	GCA_001687195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/195/GCA_001687195.1_ASM168719v1	-	SRCM100730
Gilliamella apicola	1196095	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	3.12886	33.6	-	NARU01	371	2868	2686	5/16/17	5/24/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603522	GCA_002141755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/755/GCA_002141755.1_ASM214175v1	-	AW13
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.55718	57.5	-	FXMM01	77	5591	5261	4/28/17	5/6/17	Scaffold	SC	SAMEA2609394	GCA_900180865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/865/GCA_900180865.1_14936_2_81	-	3189STDY5864935
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.75931	32.3	-	FQRI01	13	2753	2580	11/25/16	4/6/17	Contig	SC	SAMEA3449093	GCA_900128225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/225/GCA_900128225.1_17175_3_37	-	3688STDY6125085
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.55486	67.7	-	LPMR01	114	6860	6494	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449677	GCA_001534295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/295/GCA_001534295.1_ASM153429v1	-	MSMB845WGS
Xanthomonas axonopodis pv. manihotis str. Xam672	1185656	PRJNA163707	163707	Proteobacteria	Gammaproteobacteria	5.01607	64.9	-	AKFH01	165	4474	4143	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090298	GCA_000266705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/705/GCA_000266705.1_Xam672	22699502	Xam672
Xanthomonas axonopodis pv. manihotis str. Xam678	1185657	PRJNA163709	163709	Proteobacteria	Gammaproteobacteria	4.89414	65.1	-	AKFI01	256	4429	4022	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090299	GCA_000266725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/725/GCA_000266725.1_Xam678	22699502	Xam678
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.625	67.6	-	LPMT01	94	6937	6588	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449679	GCA_001534305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/305/GCA_001534305.1_ASM153430v1	-	MSMB847WGS
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79559	32.3	-	FQRJ01	14	2797	2623	11/25/16	4/6/17	Contig	SC	SAMEA3449094	GCA_900128235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/235/GCA_900128235.1_17175_3_38	-	3688STDY6125086
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.90865	56.9	-	FXNH01	111	5995	5602	4/28/17	5/6/17	Scaffold	SC	SAMEA2609401	GCA_900180875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/875/GCA_900180875.1_14936_2_83	-	3189STDY5864937
Gilliamella apicola	1196095	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.89899	34	-	NARV01	202	2619	2514	5/16/17	5/24/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603523	GCA_002141785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/785/GCA_002141785.1_ASM214178v1	-	N10
Bacillus velezensis	492670	PRJNA328523	328523	Terrabacteria group	Firmicutes	3.88601	46.4	-	MBDV01	35	3846	3673	7/22/16	3/22/17	Contig	"Insititute of microbilogy,Chinese Academy of Sciences"	SAMN05375008	GCA_001692115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/115/GCA_001692115.1_ASM169211v1	-	V4
Mesorhizobium sp. LSHC422A00	1287294	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.64917	62.5	-	AYVX01	56	6545	6038	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359683	GCA_000503075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/075/GCA_000503075.1_Mloti_LSHC422A00	-	LSHC422A00
Rhizobium sp. 58	1798804	PRJNA311628	311628	Proteobacteria	Alphaproteobacteria	5.30904	60.6	-	LSRO01	162	5030	4820	11/23/16	4/16/17	Contig	University of Copenhagen	SAMN04486984	GCA_001885575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/575/GCA_001885575.1_ASM188557v1	-	58
Microbacterium sp. RU33B	1907390	PRJEB18863	360720	Terrabacteria group	Actinobacteria	3.40644	70	-	FTPO01	4	3217	3122	1/19/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05880545	GCA_900155915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/915/GCA_900155915.1_IMG-taxon_2708742473_annotated_assembly	-	RU33B
Campylobacter sp. P0088	1895599	PRJNA341017	341017	Proteobacteria	delta/epsilon subdivisions	1.62884	33.5	-	MJKD01	23	1671	1597	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687037	GCA_002138695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/695/GCA_002138695.1_ASM213869v1	28854596	P0088
Prochlorococcus sp. scB245a_518D8	1471503	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.43968	32.1	-	JFNB01	498	-	-	4/22/14	3/24/16	Contig	Massachusetts Institute of Technology	SAMN02671374	GCA_000634395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/395/GCA_000634395.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Bacteroides sp. UNK.MGS-13	1638779	PRJNA277012	277012	FCB group	Bacteroidetes/Chlorobi group	6.40353	44.9	-	LBCE01	1584	-	-	4/24/15	4/24/15	Scaffold	The Mayo Clinic	SAMN03456681	GCA_000980575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/575/GCA_000980575.1_ASM98057v1	-	-
Thioalkalivibrio sp. AKL6	1158154	PRJNA178482	178482	Proteobacteria	Gammaproteobacteria	2.83638	66.4	-	AQXS01	11	2758	2638	4/22/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441053	GCA_000376905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/905/GCA_000376905.1_ASM37690v1	-	AKL6
Paenibacillus sp. Leaf72	1736234	PRJNA297956	297956	Terrabacteria group	Firmicutes	7.57653	48.2	-	LMLV01	35	6688	6441	11/2/15	4/6/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151614	GCA_001422685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/685/GCA_001422685.1_Leaf72	26633631	Leaf72
Methylobacterium sp. EUR3 AL-11	1305730	PRJNA195879	195879	Proteobacteria	Alphaproteobacteria	7.20951	71.1	-	JAGD01	7	-	-	1/14/14	1/23/14	Contig	DOE Joint Genome Institute	SAMN02584940	GCA_000526475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/475/GCA_000526475.1_ASM52647v1	-	EUR3 AL-11
Enterococcus sp. 5B7_DIV0075	1987386	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.74274	36.8	-	NGMR01	5	2619	2477	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04633999	GCA_002140775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/775/GCA_002140775.1_ASM214077v1	-	5B7_DIV0075
Prevotella sp. CAG:1031	1262917	PRJEB680	206632	FCB group	Bacteroidetes/Chlorobi group	2.54036	53.6	-	CAWK01	71	2239	2199	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138448	GCA_000431215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/215/GCA_000431215.1_MGS1031	-	-
Mycobacterium sp. GA-1285	1772282	PRJNA305922	305922	Terrabacteria group	Actinobacteria	4.81158	66.8	-	LQIS01	55	4550	4426	1/6/16	4/11/17	Contig	JCVI	SAMN04349499	GCA_001499905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/905/GCA_001499905.1_ASM149990v1	-	GA-1285
Streptococcus sp. HMSC072G04	1739408	PRJNA300058	300058	Terrabacteria group	Firmicutes	2.23519	41.7	-	LTWX01	50	2194	2070	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480066	GCA_001813295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/295/GCA_001813295.1_ASM181329v1	-	HMSC072G04
Bradyrhizobium sp. DOA1	1126616	PRJNA271717	271717	Proteobacteria	Alphaproteobacteria	7.5431	63.6	-	JXJM01	4	7085	6648	3/16/16	4/12/17	Scaffold	National Institute for Agro-Environmental Sciences	SAMN03276511	GCA_001593325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/325/GCA_001593325.1_ASM159332v1	-	DOA1
Arthrobacter sp. SW1	1920889	PRJNA343737	343737	Terrabacteria group	Actinobacteria	4.11812	66.6	-	MJLT01	69	3834	3683	10/13/16	4/13/17	Contig	Government Medical College	SAMN05792587	GCA_001766675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/675/GCA_001766675.1_ASM176667v1	-	SW1
Corynebacterium sp. HMSC077C02	1739256	PRJNA299906	299906	Terrabacteria group	Actinobacteria	2.43609	58.8	-	LTHP01	52	2154	2030	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477570	GCA_001810585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/585/GCA_001810585.1_ASM181058v1	-	HMSC077C02
Staphylococcus sp. HMSC063F02	1739393	PRJNA300043	300043	Terrabacteria group	Firmicutes	2.12272	31.4	-	LTXI01	52	2068	1999	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480054	GCA_001813045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/045/GCA_001813045.1_ASM181304v1	-	HMSC063F02
Enterobacter sp. MGH 14	1329823	PRJNA201929	201929	Proteobacteria	Gammaproteobacteria	5.50663	54.8	-	AXLK01	8	5471	5094	10/18/13	4/9/17	Contig	Broad Institute	SAMN02138554	GCA_000474785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/785/GCA_000474785.1_Ente_cloa_complex_MGH_14_V1_PacBio	-	MGH 14
Rhodococcus sp. 06-156-3	2022517	PRJNA395383	395383	Terrabacteria group	Actinobacteria	6.29845	64.4	-	NOYO01	42	5857	5727	8/18/17	8/21/17	Contig	Oregon State University	SAMN07376387	GCA_002258835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/835/GCA_002258835.1_ASM225883v1	-	06-156-3
Synechococcus sp. REDSEA-S01_B1	1811575	PRJNA289734	289734	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.79913	62.8	-	LURJ01	78	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534664	GCA_001628295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/295/GCA_001628295.1_ASM162829v1	27377622	-
Sphingomonas sp. Leaf42	1736219	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	3.78359	67.7	-	LMLF01	11	3470	3378	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151599	GCA_001421845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/845/GCA_001421845.1_Leaf42	26633631	Leaf42
Clostridium sp. C105KSO15	1776047	PRJEB12303	308712	Terrabacteria group	Firmicutes	5.17616	43.5	-	FBWN01	305	4727	4530	1/9/16	8/1/17	Contig	UNIVERSITY OF WARWICK	SAMEA3723034	GCA_001517445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/445/GCA_001517445.1_C105KS015	-	-
Acinetobacter sp. 528	1221302	PRJNA172719	172719	Proteobacteria	Gammaproteobacteria	4.05134	38.7	-	AMJL01	293	3927	3715	10/2/12	4/6/17	Contig	Translational Genomics Research Institute	SAMN02471256	GCA_000302395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/395/GCA_000302395.1_ASM30239v1	-	528
Bacillus sp. Root239	1736499	PRJNA297942	297942	Terrabacteria group	Firmicutes	5.7564	37.5	-	LMJS01	46	5996	5663	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155768	GCA_001429385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/385/GCA_001429385.1_Root239	26633631	Root239
Streptomyces sp. HGB0020	1078086	PRJNA72491	72491	Terrabacteria group	Actinobacteria	9.36124	70.7	-	AGER01	9	8568	8292	6/13/13	3/9/17	Scaffold	Broad Institute	SAMN02596734	GCA_000411315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/315/GCA_000411315.1_Stre_sp_HGB0020_V1	-	HGB0020
Pseudomonas sp. ML96	1523503	PRJNA255572	255572	Proteobacteria	Gammaproteobacteria	4.79678	64.8	-	JPMY01	47	4564	4467	10/1/14	4/9/17	Scaffold	"Institute of Microbiology, ASCR"	SAMN02927160	GCA_000761545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/545/GCA_000761545.1_ASM76154v1	-	ML96
Burkholderia cepacia	292	PRJDB3000	256148	Proteobacteria	Betaproteobacteria	8.48606	66.7	-	BCNU01	110	7962	7547	1/15/16	4/4/17	Contig	National Institute of Technology and Evaluation	SAMD00018762	GCA_001528845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/845/GCA_001528845.1_ASM152884v1	-	NBRC 14074
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96817	64.2	-	FSOJ01	26	4922	4774	12/14/16	3/21/17	Contig	SC	SAMEA2150636	GCA_900140205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/205/GCA_900140205.1_10665_2_73	-	532
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.41843	54.6	-	LDBV01	54	5347	5064	5/21/15	4/6/17	Contig	JCVI	SAMN03495958	GCA_001011595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/595/GCA_001011595.1_ASM101159v1	-	GN03959
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.9421	55.2	-	JZYD01	74	4903	4646	3/19/15	3/25/17	Contig	JCVI	SAMN03283663	GCA_000957335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/335/GCA_000957335.1_ASM95733v1	-	42844
Citrobacter freundii	546	PRJNA335317	335317	Proteobacteria	Gammaproteobacteria	5.38883	52.1	-	MCJD01	221	5418	5098	11/7/16	4/5/17	Contig	Hospital Universitary 12 de octubre	SAMN05440239	GCA_001867255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/255/GCA_001867255.1_ASM186725v1	-	CF1_ST89
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	4.14314	38.7	-	MDHV01	131	4104	3865	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022856	GCA_001706125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/125/GCA_001706125.1_ASM170612v1	-	UKK-0265
Streptococcus agalactiae 09mas018883	1309806	PRJEB1693	205640	Terrabacteria group	Firmicutes	2.13869	35.5	chromosome I:NC_021485.1/HF952104.1	-	1	2225	2066	5/28/13	3/15/17	Complete Genome	SLU-GBC	SAMEA2272272	GCA_000427035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/035/GCA_000427035.1_09mas018883	23846269	09mas018883
Pseudoalteromonas sp. PLSV	1547444	PRJNA261372	261372	Proteobacteria	Gammaproteobacteria	5.2488	44.2	-	JRKG01	52	4506	4359	10/20/14	4/9/17	Scaffold	Bar Ilan university	SAMN03072851	GCA_000767305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/305/GCA_000767305.1_ASM76730v1	25502665	PLSV
Streptococcus oralis subsp. oralis	1891914	PRJNA304678	304678	Terrabacteria group	Firmicutes	2.01316	41.1	-	NCUU01	47	2004	1873	4/18/17	4/21/17	Scaffold	Slagelse Hospital	SAMN06705614	GCA_002096205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/205/GCA_002096205.1_ASM209620v1	27325438	RH_5486_10
Lactobacillus paracasei subsp. paracasei CNCM I-4648	1256215	PRJNA178443	178443	Terrabacteria group	Firmicutes	2.83106	46.1	-	ANKL01	852	3235	3204	6/11/13	11/13/14	Contig	Danone Research	SAMN03177793	GCA_000410075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/075/GCA_000410075.1_ASM41007v1	23894338	CNCM I-4648
Yersinia ruckeri	29486	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	3.68489	47.6	-	CPUZ01	36	3402	3226	3/22/15	4/3/17	Scaffold	SC	SAMEA859856	GCA_001172905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/905/GCA_001172905.1_4840_7_5	-	OMBL4
Streptococcus agalactiae	1311	PRJEB643	189946	Terrabacteria group	Firmicutes	1.83887	35.5	chromosome:FO393392.1	-	1	1854	1548	5/7/13	3/7/15	Complete Genome	IP	SAMEA3283110	GCA_000967445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/445/GCA_000967445.1_ASM96744v1	-	22-Feb
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.9305	66.8	-	LPAX01	114	7353	6931	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449360	GCA_001526865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/865/GCA_001526865.1_ASM152686v1	-	MSMB1639WGS
Aeromonas hydrophila	644	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.9262	61	-	JTBD01	7	4391	3506	11/14/14	7/6/17	Contig	US Food and Drug Administration 	SAMN02934532	GCA_000783635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/635/GCA_000783635.1_ASM78363v1	-	FDAARGOS_78
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.80304	62.9	-	DBZD01	15	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06454626	GCA_002311095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/095/GCA_002311095.1_ASM231109v1	28894102	-
Vibrio sp. V10_P2A27P122	1938665	PRJNA361511	361511	Proteobacteria	Gammaproteobacteria	3.80354	44.8	-	NDIF01	310	3519	3302	8/4/17	8/6/17	Scaffold	Instituto de ecologia	SAMN06251406	GCA_002241255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/255/GCA_002241255.1_ASM224125v1	-	V10_P2A27P122
Mycobacterium abscessus subsp. bolletii 2B-0107	1001710	PRJNA65151	65151	Terrabacteria group	Actinobacteria	4.81137	64.2	-	AKUN01	7	4813	4707	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00714551	GCA_000270945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/945/GCA_000270945.1_ASM27094v1	24565502	2B-0107
Lactobacillus salivarius	1624	PRJNA357984	357984	Terrabacteria group	Firmicutes	1.94907	32.7	-	NBER01	66	1927	1806	4/5/17	4/8/17	Scaffold	University College Cork	SAMN06163256	GCA_002079685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/685/GCA_002079685.1_ASM207968v1	-	CCuG45735
Cronobacter sakazakii	28141	PRJNA329459	329459	Proteobacteria	Gammaproteobacteria	4.2686	57.5	-	MBRM01	439	4088	3868	4/17/17	4/21/17	Contig	Guangdong Institute of Microbiology	SAMN05412989	GCA_002094435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/435/GCA_002094435.1_ASM209443v1	28057934	cro2811A3-1
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.79722	55.2	-	FKZJ01	29	5543	5328	5/19/16	2/21/17	Scaffold	SC	SAMEA2273750	GCA_900083745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/745/GCA_900083745.1_11983_8_86	-	2880STDY5682675
Enterobacter cloacae subsp. cloacae 08XA1	1203195	PRJNA169339	169339	Proteobacteria	Gammaproteobacteria	4.87576	55.4	-	AMGJ01	51	4818	4592	9/20/12	5/18/17	Contig	Sichuan University	SAMN02470984	GCA_000315775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/775/GCA_000315775.1_ASM31577v1	23209197	08XA1
Proteus mirabilis	584	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.90866	38.6	-	JUXK01	98	3567	3436	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197882	GCA_001065915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/915/GCA_001065915.1_ASM106591v1	26230489	68_PMIR
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.51073	32.7	-	CUGK01	91	2508	2369	3/31/15	3/26/17	Contig	SC	SAMEA1035089	GCA_001234185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/185/GCA_001234185.1_7068_7_42	-	109939
Propionibacterium acnes HL030PA1	765103	PRJNA49241	49241	Terrabacteria group	Actinobacteria	2.54335	60	-	ADYB01	18	2544	2396	8/4/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189206	GCA_000145115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/115/GCA_000145115.1_ASM14511v1	-	HL030PA1
Burkholderia sp. FL-7-2-10-S1-D7	1637866	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.93837	66.3	-	LOWY01	101	6511	6144	1/21/16	4/11/17	Contig	Northern Arizona University	SAMN03449249	GCA_001524185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/185/GCA_001524185.1_ASM152418v1	-	FL-7-2-10-S1-D7
Campylobacter coli LMG 23341	887304	PRJNA52745	52745	Proteobacteria	delta/epsilon subdivisions	1.61702	31.4	-	AINN01	118	1668	1571	3/16/12	3/15/17	Contig	Cornell University	SAMN02429002	GCA_000254035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/035/GCA_000254035.2_ASM25403v2	-	LMG 23341
Mannheimia haemolytica	75985	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.66513	41	-	LQFQ01	78	2758	2603	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366564	GCA_001930845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/845/GCA_001930845.1_ASM193084v1	-	327511MH
Lactobacillus plantarum 4_3	1382366	PRJNA214266	214266	Terrabacteria group	Firmicutes	3.32036	44.3	-	AYTU01	105	3213	3043	12/12/13	3/24/17	Contig	Kunming University of Science and Technology	SAMN02303046	GCA_000507045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/507/045/GCA_000507045.1_Velvet_for_Version_1.2.03_of_the_Lactobacillus_plantarum_genome	-	4_3
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.15279	59.6	-	JVZU01	204	4882	4730	7/10/15	3/26/17	Contig	University of Washington	SAMN03197144	GCA_001061145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/145/GCA_001061145.1_ASM106114v1	26230489	1186_SMAR
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.07757	41.6	-	JJQZ01	159	3518	3296	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708973	GCA_000980135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/135/GCA_000980135.1_gtlEnvA5udCFS	25756680	1.H.T.2.1
Yersinia enterocolitica	630	PRJEB13626	384942	Proteobacteria	Gammaproteobacteria	4.43256	46.9	-	FKKM01	146	4218	3885	5/1/17	5/9/17	Contig	IP	SAMEA3935390	GCA_900079835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/835/GCA_900079835.1_IP35459	-	-
Mycoplasma pneumoniae	2104	PRJNA291007	291007	Terrabacteria group	Tenericutes	0.820892	40.1	-	LHPP01	13	801	705	9/22/15	4/4/17	Scaffold	Centre for genomic regulation (CRG)	SAMN03897300	GCA_001296505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/505/GCA_001296505.1_ASM129650v1	26335586	Mympn_2285
Corynebacterium diphtheriae	1717	PRJNA360016	360016	Terrabacteria group	Actinobacteria	2.51374	53.5	-	MSTV01	96	2469	2074	1/29/17	4/10/17	Contig	"CMC, Vellore"	SAMN06198943	GCA_001974665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/974/665/GCA_001974665.1_ASM197466v1	-	WD138
Bordetella bronchiseptica MO275	1331240	PRJNA202152	202152	Proteobacteria	Betaproteobacteria	4.75581	68.4	-	JHBS01	98	4486	4364	5/13/14	4/2/17	Contig	JCVI	SAMN02231297	GCA_000690695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/695/GCA_000690695.1_gbb44v01	25908122	MO275
Streptococcus agalactiae	1311	PRJNA174852	174852	Terrabacteria group	Firmicutes	1.84195	35.5	chromosome:CP003919.2	-	1	1912	1679	11/2/12	3/9/17	Complete Genome	Laboratory of Cellular and Molecular Genetics (Federal University of Minas Gerais)	SAMN02603506	GCA_000302475.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/475/GCA_000302475.3_ASM30247v3	-	SA20
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.3125	57.2358	chromosome 1:NZ_CP018548.1/CP018548.1; chromosome 2:NZ_CP018549.1/CP018549.1	-	2	3375	3145	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932983	GCA_002192135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/135/GCA_002192135.1_ASM219213v1	28388689	BwIM_TUR_24
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.99331	46.6	-	JTID01	91	3027	2773	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196629	GCA_001656605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/605/GCA_001656605.1_ASM165660v1	-	Lrh26
Pasteurella multocida subsp. multocida	44283	PRJNA303093	303093	Proteobacteria	Gammaproteobacteria	2.28314	40.3	-	LUCZ01	15	2153	2063	6/20/16	4/5/17	Scaffold	Sichuan Agricultural University	SAMN04285687	GCA_001670445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/670/445/GCA_001670445.1_ASM167044v1	-	DY120818
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12788	41.2	-	CVXZ01	79	2068	1891	6/24/15	3/26/17	Contig	SC	SAMEA1032815	GCA_001176045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/045/GCA_001176045.1_6817_2_89	-	EQUI0042
Stenotrophomonas maltophilia	40324	PRJEB8824	307423	Proteobacteria	Gammaproteobacteria	4.50459	66.6	-	CVIU01	48	4121	3942	1/3/16	3/27/17	Contig	UMR5557	SAMEA3309461	GCA_001499695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/695/GCA_001499695.1_BurE1	-	-
Chlamydia psittaci 84-8471/1	1112230	PRJNA77033	77033	PVC group	Chlamydiae	1.21166	39.6	-	ATMY01	851	3245	3209	7/2/13	11/19/13	Scaffold	University of Maryland School of Medicine	SAMN00860220	GCA_000417845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/845/GCA_000417845.2_ASM41784v2	-	84-8471/1
Enterococcus faecium P1190	1134832	PRJNA82053	82053	Terrabacteria group	Firmicutes	2.89349	37.7	-	AMAL01	225	2950	2810	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299507	GCA_000294995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/995/GCA_000294995.2_ASM29499v2	-	P1190
Neisseria gonorrhoeae SK39420	1351777	PRJNA209470	209470	Proteobacteria	Betaproteobacteria	2.12702	52.5	-	ATQA01	450	2519	2122	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02338803	GCA_001026245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/245/GCA_001026245.1_ASM102624v1	-	SK39420
Streptococcus mutans TCI-267	1074178	PRJNA72095	72095	Terrabacteria group	Firmicutes	1.81974	37	-	AGME01	127	1857	1738	10/6/11	3/22/17	Contig	JCVI	SAMN02436439	GCA_000229785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/785/GCA_000229785.2_SMUT7-NEX_7-267	-	TCI-267
Enterococcus faecalis D6	565650	PRJNA32947	32947	Terrabacteria group	Firmicutes	2.90625	37.6	-	ACAT01	11	2910	2797	5/20/09	3/22/17	Scaffold	Broad Institute	SAMN02595264	GCA_000157455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/455/GCA_000157455.1_ASM15745v1	-	D6
Clostridium botulinum CDC54091	1435053	PRJNA231044	231044	Terrabacteria group	Firmicutes	4.07905	28.1	-	AZRR01	721	4037	2055	2/25/14	4/10/17	Contig	Centers for Disease Control and Prevention	SAMN02951882	GCA_000582455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/455/GCA_000582455.1_CDC54091.1	24632257	CDC54091
Streptococcus parauberis KCTC 11537	936154	PRJNA61187	61187	Terrabacteria group	Firmicutes	2.14389	35.5	chromosome:NC_015558.1/CP002471.1	-	1	2222	1829	5/17/11	3/30/17	Complete Genome	"Gyeongsang National University, Aquatic Biotechnology Center of WCU project"	SAMN02603301	GCA_000213825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/825/GCA_000213825.1_ASM21382v1	21531805	KCTC 11537
Lactococcus lactis subsp. lactis	1360	PRJEB14157	331029	Terrabacteria group	Firmicutes	2.73062	35.4946	chromosome 1:NZ_LT599049.1/LT599049.1; plasmid pA12-1:NZ_LT599050.1/LT599050.1; plasmid pA12-2:NZ_LT599051.1/LT599051.1; plasmid pA12-3:NZ_LT599052.1/LT599052.1; plasmid pA12-4:NZ_LT599053.1/LT599053.1	-	5	2707	2478	7/23/16	4/5/17	Complete Genome	UNIVERSITY TOULOUSE III	SAMEA4005236	GCA_900088425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/425/GCA_900088425.1_A12	-	A12
Vibrio parahaemolyticus	670	PRJNA288141	288141	Proteobacteria	Gammaproteobacteria	5.22579	45.2	-	LFWP01	74	4984	4715	8/17/15	3/18/17	Scaffold	Health Canada	SAMN03795185	GCA_001268015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/015/GCA_001268015.1_ASM126801v1	-	S349-10
Streptococcus mitis 13/39	1239793	PRJNA176681	176681	Terrabacteria group	Firmicutes	2.05888	39.7	-	AQTU01	153	2046	2023	4/30/13	1/8/14	Contig	"Research Institute of Physical-Chemical Medicine, Moscow, Russia"	SAMN02470854	GCA_000385835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/835/GCA_000385835.1_ASM38583v1	-	13/39
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.86734	37.8	-	MLKS01	321	1966	1602	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297006	GCA_001867445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/445/GCA_001867445.1_ASM186744v1	27118061	AWRIB1064
Xanthomonas oryzae pv. oryzae	64187	PRJNA269425	269425	Proteobacteria	Gammaproteobacteria	4.28179	63.9	-	JXEV01	420	4243	3457	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252516	GCA_001927795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/795/GCA_001927795.1_ASM192779v1	-	DXO-133
Campylobacter fetus subsp. fetus	32019	PRJEB8721	292173	Proteobacteria	delta/epsilon subdivisions	1.86361	33.9	-	FAUX01	31	1976	1857	11/29/15	4/4/17	Scaffold	SC	SAMEA3310296	GCA_001486965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/486/965/GCA_001486965.1_17150_1_83	-	006A-0180
Xanthomonas citri subsp. citri	611301	PRJEB7158	306115	Proteobacteria	Gammaproteobacteria	5.2648	64.6	-	CCWA01	85	5020	4945	12/16/15	12/16/15	Scaffold	Genoscope CEA	SAMEA2752227	GCA_001495295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/295/GCA_001495295.1_ASX_R_PRJEB7158_v1	-	-
Brucella abortus 64/108	1160199	PRJNA173621	173621	Proteobacteria	Alphaproteobacteria	3.28743	57.2	-	AQIZ01	2	3378	3160	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00811203	GCA_000370085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/085/GCA_000370085.1_Bruc_abor_64_108_V1	-	64/108
Francisella tularensis subsp. tularensis 80700103	1210519	PRJNA170749	170749	Proteobacteria	Gammaproteobacteria	1.81084	32.3	-	AMPX01	58	1910	1574	10/16/12	3/30/17	Contig	Dugway Proving Ground	SAMN02469755	GCA_000305855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/855/GCA_000305855.1_ASM30585v1	-	80700103
Shigella boydii	621	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.30842	59.4	-	JWAE01	101	5140	4954	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03197134	GCA_001060475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/475/GCA_001060475.1_ASM106047v1	26230489	1177_SBOY
Clostridioides difficile T5	1215059	PRJEB188	222741	Terrabacteria group	Firmicutes	3.96132	28.8	-	CAMB01	227	3665	3511	10/14/13	3/17/17	Scaffold	LPBA	SAMEA3146273	GCA_001050575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/575/GCA_001050575.1_ASM105057v1	24482682	T5
Vibrio cholerae HC-33A2	991957	PRJNA63921	63921	Proteobacteria	Gammaproteobacteria	4.02473	47.5	-	AGUP01	64	3821	3670	11/4/11	3/22/17	Scaffold	Institute for Genome Sciences	SAMN00262261	GCA_000234885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/885/GCA_000234885.1_ASM23488v1	-	HC-33A2
Ralstonia solanacearum	305	PRJNA347357	347357	Proteobacteria	Betaproteobacteria	5.6795	66.9	-	MOLO01	162	5101	4847	11/7/16	4/5/17	Contig	University of Exeter	SAMN05879716	GCA_001870805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/805/GCA_001870805.1_ASM187080v1	-	PSS1308
Bacillus thuringiensis Sbt003	1235825	PRJNA175950	175950	Terrabacteria group	Firmicutes	6.17739	35.2	-	AMYJ01	61	6685	6194	2/20/15	4/3/17	Scaffold	Huazhong Agricultural University	SAMN03013093	GCA_000878525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/525/GCA_000878525.1_ASM87852v1	25656389	Sbt003
Burkholderia mallei	13373	PRJNA336108	336108	Proteobacteria	Betaproteobacteria	5.55686	68.7	-	MDTH01	250	5875	5458	10/23/16	4/5/17	Contig	ICAR-National Research Centre on Equines	SAMN05504014	GCA_001831355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/355/GCA_001831355.1_ASM183135v1	-	3076
Bacillus cereus	1396	PRJNA401060	401060	Terrabacteria group	Firmicutes	5.30832	35.4926	chromosome:NZ_CP023179.1/CP023179.1; plasmid p1:NZ_CP023180.1/CP023180.1; plasmid p2:NZ_CP023181.1/CP023181.1; plasmid p3:NZ_CP023182.1/CP023182.1; plasmid p4:NZ_CP023183.1/CP023183.1	-	5	5689	5306	9/12/17	9/14/17	Complete Genome	Dalian university of technology	SAMN07593956	GCA_002290105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/105/GCA_002290105.1_ASM229010v1	-	CC-1
Bacillus thuringiensis	1428	PRJNA238078	238078	Terrabacteria group	Firmicutes	5.29139	35.4811	chromosome:NZ_CP009720.1/CP009720.1; plasmid pBGN_1:NZ_CP009719.1/CP009719.1; plasmid pBGN_2:NZ_CP009718.1/CP009718.1; plasmid pBGN_3:NZ_CP009717.1/CP009717.1	-	4	5761	5422	2/5/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03120827	GCA_000832925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/925/GCA_000832925.1_ASM83292v1	25931591	HD682
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.05273	67	-	MUQI01	115	7662	7230	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001816	GCA_001991475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/475/GCA_001991475.1_ASM199147v1	-	VC8379
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.15711	38.7	-	NGPE01	162	2174	1955	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848400	GCA_002253745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/745/GCA_002253745.1_ASM225374v1	-	601l
Bacteroides fragilis str. 3986 T(B)13	1339303	PRJNA206146	206146	FCB group	Bacteroidetes/Chlorobi group	5.06278	43.2	-	JGEJ01	44	4473	4209	3/20/14	4/18/17	Contig	IGS	SAMN02314539	GCA_000598965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/965/GCA_000598965.1_ASM59896v1	-	3986 T(B)13
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.95227	50.4	-	CXLO01	433	5627	4767	7/16/15	2/24/17	Contig	SC	SAMEA2004002	GCA_001259415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/415/GCA_001259415.1_8290_5_13	-	36303731
Elizabethkingia endophytica	1606016	PRJNA326741	326741	FCB group	Bacteroidetes/Chlorobi group	4.2811	35.4621	chromosome:NZ_CP016374.1/CP016374.1; plasmid unnamed:NZ_CP016375.1/CP016375.1	-	2	3916	3783	3/6/17	3/8/17	Complete Genome	CDC	SAMN05277779	GCA_002022085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/085/GCA_002022085.1_ASM202208v1	-	F3201
Bacillus licheniformis	1402	PRJNA296449	296449	Terrabacteria group	Firmicutes	3.75823	45.6	-	LKPM01	29	4128	3914	12/30/16	4/6/17	Scaffold	TIFN	SAMN04127589	GCA_001925025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/925/025/GCA_001925025.1_ASM192502v1	27994575	B4089
Vibrio vulnificus	672	PRJNA355116	355116	Proteobacteria	Gammaproteobacteria	5.03781	46.6	-	NOIX01	154	4733	4465	8/30/17	9/1/17	Contig	FDA	SAMN06140069	GCA_002278435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/435/GCA_002278435.1_ASM227843v1	-	WAPHLVBRA00011
Pseudomonas syringae pv. actinidiae str. Shaanxi_M7	1108973	PRJNA76167	76167	Proteobacteria	Gammaproteobacteria	6.09257	58.4	-	ANJJ01	1590	6261	5073	3/5/13	5/19/17	Contig	University of Otago	SAMN02471916	GCA_000344495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/495/GCA_000344495.1_M7PSA1.0	23555547	Shaanxi_M7
Streptococcus suis 92-1400	1214177	PRJNA171436	171436	Terrabacteria group	Firmicutes	2.30598	40.8	-	ALLO01	78	2279	2099	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469555	GCA_000440715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/715/GCA_000440715.1_version1	-	92-1400
Streptococcus agalactiae	1311	PRJNA244605	244605	Terrabacteria group	Firmicutes	2.04834	35.4	-	JMBJ01	105	2077	1987	6/27/14	3/16/17	Scaffold	"Faculty of Veterinary Science, Chulalongkorn University"	SAMN02727743	GCA_000715315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/315/GCA_000715315.1_StrAga1.0	25502682	FPrA02
Bacillus cereus FRI-35	1217984	PRJNA171769	171769	Terrabacteria group	Firmicutes	5.38232	35.4535	chromosome:NC_018491.1/CP003747.1; plasmid p01:NC_018492.1/CP003748.1; plasmid p02:NC_018493.1/CP003749.1; plasmid p03:NC_018499.1/CP003750.1; plasmid p04:NC_018494.1/CP003751.1	-	5	5774	5405	8/21/12	3/24/17	Complete Genome	Los Alamos National Laboratory	SAMN02603563	GCA_000292415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/415/GCA_000292415.1_ASM29241v1	-	FRI-35
Bacillus cereus	1396	PRJNA335430	335430	Terrabacteria group	Firmicutes	5.34101	35.4488	chromosome:NZ_CP018933.1/CP018933.1; plasmid unnamed1:NZ_CP018934.1/CP018934.1	-	2	5791	5446	1/10/17	3/28/17	Complete Genome	NBACC	SAMN05442525	GCA_001941885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/885/GCA_001941885.1_ASM194188v1	-	ISSFR-9F
Bifidobacterium longum	216816	PRJNA379831	379831	Terrabacteria group	Actinobacteria	2.45361	59.9	-	NAQC01	55	2250	1950	3/31/17	4/6/17	Contig	University of Parma	SAMN06621715	GCA_002075935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/935/GCA_002075935.1_Bbif1897B	-	1897B
Shigella flexneri	623	PRJNA315925	315925	Proteobacteria	Gammaproteobacteria	4.74686	50.4	-	LVIH01	463	5512	4339	5/20/16	8/11/17	Contig	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04570175	GCA_001648965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/965/GCA_001648965.1_ASM164896v1	-	BJ4s03
Bacillus anthracis str. Australia 94	280477	PRJNA10799	10799	Terrabacteria group	Firmicutes	5.50456	35.2	-	AAES01	49	6173	5737	6/4/04	5/18/17	Scaffold	J. Craig Venter Institute	SAMN02435830	GCA_000167335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/335/GCA_000167335.1_ASM16733v1	-	Australia 94
Pseudomonas putida	303	PRJNA387110	387110	Proteobacteria	Gammaproteobacteria	6.18505	61.6	-	NHBC01	34	5794	5509	6/2/17	6/5/17	Contig	Queens University Belfast	SAMN07139229	GCA_002165665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/665/GCA_002165665.1_ASM216566v1	-	UV4/95
Leptospira interrogans serovar Copenhageni str. M20	1249484	PRJNA178718	178718	Spirochaetes	Spirochaetia	4.62896	35.1	-	AOGV02	53	4123	3735	1/18/13	5/19/17	Contig	J. Craig Venter Institute	SAMN02436483	GCA_000332535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/535/GCA_000332535.2_gls454204v02	-	M20
Streptococcus pyogenes ATCC 10782	864568	PRJNA50517	50517	Terrabacteria group	Firmicutes	1.91708	38.8	-	AEEO01	29	1883	1765	8/24/10	3/22/17	Scaffold	Baylor College of Medicine	SAMN00189880	GCA_000146715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/146/715/GCA_000146715.1_ASM14671v1	-	ATCC 10782
Bacillus cereus	1396	PRJNA335430	335430	Terrabacteria group	Firmicutes	5.3404	35.4396	chromosome:NZ_CP018931.1/CP018931.1; plasmid unnamed:NZ_CP018932.1/CP018932.1	-	2	5794	5457	1/10/17	3/28/17	Complete Genome	NBACC	SAMN05442524	GCA_001941905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/905/GCA_001941905.1_ASM194190v1	-	ISSFR-3F
Bacillus thuringiensis	1428	PRJNA238070	238070	Terrabacteria group	Firmicutes	5.31218	35.4084	chromosome:NZ_CP009600.1/CP009600.1; plasmid pBFQ:NZ_CP009599.1/CP009599.1	-	2	5747	5406	2/5/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03085882	GCA_000832825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/825/GCA_000832825.1_ASM83282v1	25931591	HD571
Streptococcus pneumoniae PNI0212	1159099	PRJNA89201	89201	Terrabacteria group	Firmicutes	2.028	39.8	-	AJUZ01	126	2184	1995	4/8/13	3/9/17	Scaffold	Washington University	SAMN02436684	GCA_000355925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/925/GCA_000355925.1_ASM35592v1	-	PNI0212
Bacillus thuringiensis str. Al Hakam	412694	PRJNA18255	18255	Terrabacteria group	Firmicutes	5.31303	35.4084	chromosome:NC_008600.1/CP000485.1; plasmid pALH1:NC_008598.1/CP000486.1	-	2	5751	5405	11/27/06	5/18/17	Complete Genome	DOE Joint Genome Institute	SAMN02598406	GCA_000015065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/065/GCA_000015065.1_ASM1506v1	17337577	Al Hakam
Bacillus thuringiensis	1428	PRJNA381833	381833	Terrabacteria group	Firmicutes	5.24633	35.4	chromosome:NZ_CP020723.1/CP020723.1	-	1	5690	5314	6/13/17	6/15/17	Complete Genome	South China University of Technology	SAMN06689774	GCA_002192515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/515/GCA_002192515.1_ASM219251v1	28479507	BM-BT15426
Haemophilus influenzae	727	PRJNA285215	285215	Proteobacteria	Gammaproteobacteria	1.90195	38	-	LFDJ01	27	1923	1775	7/21/15	3/26/17	Contig	University of Oklahoma Health Sciences Center	SAMN03702702	GCA_001184705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/705/GCA_001184705.1_ASM118470v1	26390432	HI1408
Mycobacterium bovis BCG	33892	PRJEB8560	294541	Terrabacteria group	Actinobacteria	4.30614	65.6	-	CUWE01	1	4195	3972	9/1/15	4/4/17	Scaffold	KAUST	SAMEA3257663	GCA_001287065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/065/GCA_001287065.1_bcg_Birkhaug	-	Birkhaug
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.20324	69.1	-	LNAF01	167	4924	4667	4/4/16	4/5/17	Contig	Robert Koch Institute	SAMN04229397	GCA_001610185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/185/GCA_001610185.1_ASM161018v1	-	MAH-E-82-7
Xanthomonas campestris pv. musacearum NCPPB 2251	1184256	PRJNA163287	163287	Proteobacteria	Gammaproteobacteria	4.53531	63.4	-	LGTY01	684	4229	3107	7/31/15	7/31/15	Contig	University of Exeter	SAMN00991248	GCA_001189905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/905/GCA_001189905.1_NCPPB2251v1	24704974	NCPPB 2251
Lactococcus lactis subsp. lactis	1360	PRJNA294255	294255	Terrabacteria group	Firmicutes	2.6843	34.8	-	LKLI01	110	2705	2524	12/4/15	4/4/17	Contig	Radboudumc	SAMN04026621	GCA_001456545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/545/GCA_001456545.1_ASM145654v1	-	KF67
Bacillus cereus 95/8201	526979	PRJNA29669	29669	Terrabacteria group	Firmicutes	5.58406	35.1	chromosome:NZ_CM000727.1/CM000727.1	ACMF01	1	11832	11368	4/30/09	5/18/17	Chromosome	Naval Medical Research Center	SAMN00110498	GCA_000161135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/135/GCA_000161135.1_ASM16113v1	22645259	95/8201
Staphylococcus epidermidis NIHLM049	979207	PRJNA62361	62361	Terrabacteria group	Firmicutes	2.47997	32.1	-	AKGQ01	56	2461	2319	7/9/12	3/23/17	Contig	NISC - NIH Intramural Sequencing Center	SAMN00993261	GCA_000276385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/385/GCA_000276385.1_ASM27638v1	-	NIHLM049
Streptococcus agalactiae	1311	PRJNA356737	356737	Terrabacteria group	Firmicutes	1.83516	35.4	chromosome:CP018623.1	-	1	1904	1645	12/19/16	12/19/16	Complete Genome	Londrina State University	SAMN06124256	GCA_001908255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/255/GCA_001908255.1_ASM190825v1	-	S13
Yersinia pestis subsp. microtus bv. Talassica	385968	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.62624	47.6	-	LIYW01	275	4365	3953	9/21/15	3/26/17	Scaffold	SRCAMB	SAMN03861481	GCA_001294975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/975/GCA_001294975.1_ASM129497v1	26634751	SCPM-O-B-7019
Pseudomonas fluorescens	294	PRJNA283448	283448	Proteobacteria	Gammaproteobacteria	4.83415	58.7	-	LCYW01	56	4475	4306	6/5/15	4/3/17	Contig	"University of Michigan, Ann Arbor"	SAMN03650289	GCA_001020655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/655/GCA_001020655.1_ASM102065v1	-	AU11164
Marinilactibacillus sp. 15R	1911586	PRJNA349087	349087	Terrabacteria group	Firmicutes	2.76791	35.4	chromosome:NZ_CP017761.1/CP017761.1	-	1	2693	2550	12/9/16	4/16/17	Complete Genome	Shanghai Ocean University	SAMN05920238	GCA_001895285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/285/GCA_001895285.1_ASM189528v1	-	15R
Streptococcus agalactiae	1311	PRJNA323692	323692	Terrabacteria group	Firmicutes	2.09029	35.4	chromosome:NZ_CP016391.1/CP016391.1	-	1	2177	2018	7/11/16	3/20/17	Complete Genome	Chinese Academy of Fishery Sciences	SAMN05187216	GCA_001683515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/515/GCA_001683515.1_ASM168351v1	-	FWL1402
Bacillus anthracis	1392	PRJNA295544	295544	Terrabacteria group	Firmicutes	5.22709	35.4	chromosome:NZ_CP012729.1/CP012729.1	-	1	5840	5471	7/11/16	3/28/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN04093744	GCA_001683065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/065/GCA_001683065.1_ASM168306v1	27152321	Parent2
Bacillus anthracis	1392	PRJNA295544	295544	Terrabacteria group	Firmicutes	5.22866	35.4	chromosome:NZ_CP012730.1/CP012730.1	-	1	5844	5476	7/11/16	3/28/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN04093743	GCA_001683095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/095/GCA_001683095.1_ASM168309v1	27152321	Parent1
Bacillus anthracis	1392	PRJNA295544	295544	Terrabacteria group	Firmicutes	5.22866	35.4	chromosome:NZ_CP012720.1/CP012720.1	-	1	5844	5475	7/11/16	3/28/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN04075676	GCA_001683135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/135/GCA_001683135.1_ASM168313v1	27152321	PR01
Bacillus anthracis	1392	PRJNA295544	295544	Terrabacteria group	Firmicutes	5.22866	35.4	chromosome:NZ_CP012721.1/CP012721.1	-	1	5844	5475	7/11/16	3/28/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN04075677	GCA_001683155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/155/GCA_001683155.1_ASM168315v1	27152321	PR02
Pseudomonas fluorescens	294	PRJNA283451	283451	Proteobacteria	Gammaproteobacteria	4.86382	58.8	-	LCZA01	62	4542	4337	6/5/15	4/3/17	Contig	"University of Michigan, Ann Arbor"	SAMN03650292	GCA_001020705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/705/GCA_001020705.1_ASM102070v1	-	AU12644
Yersinia pestis subsp. microtus bv. Ulegeica	385969	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.6369	47.5	-	LIZD01	189	4347	3962	9/21/15	3/26/17	Scaffold	SRCAMB	SAMN03861510	GCA_001295025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/025/GCA_001295025.1_ASM129502v1	26634751	SCPM-O-B-6213
Bacillus anthracis	1392	PRJNA295544	295544	Terrabacteria group	Firmicutes	5.22866	35.4	chromosome:NZ_CP012722.1/CP012722.1	-	1	5844	5475	7/11/16	3/28/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN04075680	GCA_001683175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/175/GCA_001683175.1_ASM168317v1	-	PR05
Staphylococcus epidermidis NIHLM057	979205	PRJNA62357	62357	Terrabacteria group	Firmicutes	2.54435	32.1	-	AKGO01	104	2555	2332	7/9/12	3/23/17	Contig	NISC - NIH Intramural Sequencing Center	SAMN00993232	GCA_000276425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/425/GCA_000276425.1_ASM27642v1	-	NIHLM057
Bacillus cereus Rock1-3	526981	PRJNA29673	29673	Terrabacteria group	Firmicutes	5.85985	34.9	chromosome:NZ_CM000728.1/CM000728.1	ACMG01	1	12073	11575	4/30/09	6/15/17	Chromosome	Naval Medical Research Center	SAMN00727650	GCA_000161155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/155/GCA_000161155.1_ASM16115v1	22645259	Rock1-3
Lactococcus lactis subsp. lactis	1360	PRJNA294255	294255	Terrabacteria group	Firmicutes	2.57452	34.7	-	LKLK01	44	2560	2417	12/4/15	4/4/17	Contig	Radboudumc	SAMN04026623	GCA_001456575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/575/GCA_001456575.1_ASM145657v1	-	KF146
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.30978	69	-	LNAG01	214	5039	4778	4/4/16	4/5/17	Contig	Robert Koch Institute	SAMN04229399	GCA_001610215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/215/GCA_001610215.1_ASM161021v1	-	MAH-E-83-1
Mycobacterium bovis BCG	33892	PRJEB8560	294541	Terrabacteria group	Actinobacteria	4.30717	65.6	-	CUWP01	1	4197	3988	9/1/15	4/4/17	Scaffold	KAUST	SAMEA3257675	GCA_001287105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/105/GCA_001287105.1_bcg_Sweden	-	Sweden
Haemophilus influenzae	727	PRJNA285410	285410	Proteobacteria	Gammaproteobacteria	1.86353	38	-	LDWA01	83	1884	1765	8/31/15	3/26/17	Contig	University of Queensland	SAMN03753645	GCA_001276545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/545/GCA_001276545.1_ASM127654v1	-	C10
Bacillus anthracis	1392	PRJNA295544	295544	Terrabacteria group	Firmicutes	5.22866	35.4	chromosome:NZ_CP012723.1/CP012723.1	-	1	5844	5476	7/11/16	3/28/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN04075681	GCA_001683195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/195/GCA_001683195.1_ASM168319v1	27152321	PR06
Bacillus anthracis	1392	PRJNA295544	295544	Terrabacteria group	Firmicutes	5.22709	35.4	chromosome:NZ_CP012724.1/CP012724.1	-	1	5840	5472	7/11/16	3/28/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN04075682	GCA_001683215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/215/GCA_001683215.1_ASM168321v1	-	PR07
Streptococcus pneumoniae PNI0164	1159096	PRJNA89195	89195	Terrabacteria group	Firmicutes	2.07625	39.9	-	AJUY01	123	2212	2000	4/8/13	3/3/17	Scaffold	Washington University	SAMN02436799	GCA_000355945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/945/GCA_000355945.1_ASM35594v1	-	PNI0164
Bacillus anthracis	1392	PRJNA295544	295544	Terrabacteria group	Firmicutes	5.22709	35.4	chromosome:NZ_CP012725.1/CP012725.1	-	1	5840	5472	7/11/16	3/28/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN04075683	GCA_001683235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/235/GCA_001683235.1_ASM168323v1	27152321	PR08
Bacillus anthracis	1392	PRJNA295544	295544	Terrabacteria group	Firmicutes	5.22706	35.4	chromosome:NZ_CP012726.1/CP012726.1	-	1	5841	5470	7/11/16	3/28/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN04075684	GCA_001683255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/255/GCA_001683255.1_ASM168325v1	27152321	PR09-1
Streptococcus pyogenes BJCYGAS15	1213458	PRJNA171138	171138	Terrabacteria group	Firmicutes	1.84964	38.3	-	ALKD01	45	1858	1763	8/14/12	3/23/17	Scaffold	"State Key Laboratory for Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, People’s Republic of China"	SAMN02469371	GCA_000290575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/575/GCA_000290575.1_ASM29057v1	23045496	BJCYGAS15
Leptospira interrogans serovar Pomona str. Fox 32256	1218574	PRJNA177162	177162	Spirochaetes	Spirochaetia	4.58372	35	-	AOHG01	172	4181	3674	2/28/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01886736	GCA_000342365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/365/GCA_000342365.1_gls454201v02	-	Fox 32256
Pseudomonas putida	303	PRJNA387110	387110	Proteobacteria	Gammaproteobacteria	6.09475	61.6	-	NHBB01	31	5717	5427	6/2/17	6/5/17	Contig	Queens University Belfast	SAMN07139228	GCA_002165695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/695/GCA_002165695.1_ASM216569v1	-	UV4
Bacillus anthracis str. Tsiankovskii-I	405536	PRJNA17709	17709	Terrabacteria group	Firmicutes	5.50473	35.2	-	ABDN02	56	6151	5698	7/11/07	5/18/17	Scaffold	J. Craig Venter Institute	SAMN02436236	GCA_000181675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/181/675/GCA_000181675.2_ASM18167v2	-	Tsiankovskii-I
Shigella flexneri	623	PRJNA315925	315925	Proteobacteria	Gammaproteobacteria	4.6711	50.5	-	LVIP01	496	5374	4265	5/20/16	8/8/17	Contig	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04570183	GCA_001649015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/015/GCA_001649015.1_ASM164901v1	-	HN4s01
Bifidobacterium longum	216816	PRJNA379831	379831	Terrabacteria group	Actinobacteria	2.34167	59.9	-	NAQH01	109	2117	1798	3/31/17	4/6/17	Contig	University of Parma	SAMN06621710	GCA_002076015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/015/GCA_002076015.1_Bbif1890B	-	1890B
Bacillus anthracis	1392	PRJNA295544	295544	Terrabacteria group	Firmicutes	5.22709	35.4	chromosome:NZ_CP012727.1/CP012727.1	-	1	5840	5471	7/11/16	3/28/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN04075685	GCA_001683275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/275/GCA_001683275.1_ASM168327v1	27152321	PR09-4
Bacillus anthracis	1392	PRJNA295544	295544	Terrabacteria group	Firmicutes	5.22708	35.4	chromosome:NZ_CP012728.1/CP012728.1	-	1	5840	5470	7/11/16	3/28/17	Complete Genome	University of Illinois at Urbana-Champaign	SAMN04075686	GCA_001683295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/295/GCA_001683295.1_ASM168329v1	27152321	PR10-4
Streptococcus agalactiae	1311	PRJNA298901	298901	Terrabacteria group	Firmicutes	1.95396	35.4	-	LLVS01	174	2005	1883	11/6/15	3/18/17	Scaffold	MSU	SAMN04168595	GCA_001439905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/905/GCA_001439905.1_ASM143990v1	-	GB00411
Streptococcus suis 92-4172	1214178	PRJNA171437	171437	Terrabacteria group	Firmicutes	2.3039	41.3	-	ALLP01	102	2275	2124	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469561	GCA_000440735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/735/GCA_000440735.1_version1	-	92-4172
Pseudomonas syringae pv. actinidiae ICMP 19455	1248724	PRJNA178611	178611	Proteobacteria	Gammaproteobacteria	6.22131	58.5	-	ANJK01	412	6015	5494	3/5/13	3/27/17	Contig	University of Otago	SAMN02471915	GCA_000344515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/515/GCA_000344515.2_ICMP19455PSA1.0	23555547	ICMP 19455
Vibrio vulnificus	672	PRJNA355116	355116	Proteobacteria	Gammaproteobacteria	4.91432	46.6	-	NOJA01	134	4643	4385	8/30/17	9/1/17	Contig	FDA	SAMN06062367	GCA_002278445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/445/GCA_002278445.1_ASM227844v1	-	WAPHLVBRA00008
Bacillus licheniformis	1402	PRJNA296449	296449	Terrabacteria group	Firmicutes	4.53481	45.9	-	LKPP01	141	4766	4326	12/30/16	4/6/17	Scaffold	TIFN	SAMN04127602	GCA_001925035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/925/035/GCA_001925035.1_ASM192503v1	27994575	B4123
Streptococcus agalactiae	1311	PRJNA274685	274685	Terrabacteria group	Firmicutes	2.08451	35.4	chromosome:NZ_CP010874.1/CP010874.1	-	1	2178	2025	3/15/16	9/26/17	Complete Genome	CUHK	SAMN03331945	GCA_001592385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/385/GCA_001592385.1_ASM159238v1	-	CU_GBS_08
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.72243	50.7	-	CXJH01	394	5303	4546	7/16/15	2/24/17	Contig	SC	SAMEA2003429	GCA_001259855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/855/GCA_001259855.1_8289_7_93	-	87772
Bacteroides fragilis str. A7 (UDC12-2)	1339274	PRJNA206105	206105	FCB group	Bacteroidetes/Chlorobi group	5.20107	43.2	-	JGEK01	87	4575	4306	3/20/14	4/18/17	Contig	IGS	SAMN02314413	GCA_000598985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/985/GCA_000598985.1_ASM59898v1	-	A7 (UDC12-2)
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.15953	38.7	-	NGPG01	291	2193	1863	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848398	GCA_002253755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/755/GCA_002253755.1_ASM225375v1	-	601f
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.0645	67.1	-	MUQR01	191	7650	7191	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001828	GCA_001991495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/495/GCA_001991495.1_ASM199149v1	-	VC8057
Streptococcus agalactiae	1311	PRJNA274685	274685	Terrabacteria group	Firmicutes	2.02967	35.4	chromosome:NZ_CP010875.1/CP010875.1	-	1	2103	1956	3/15/16	3/19/17	Complete Genome	CUHK	SAMN03331944	GCA_001592425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/425/GCA_001592425.1_ASM159242v1	-	CU_GBS_98
Liberibacter crescens	1273132	PRJNA269727	269727	Proteobacteria	Alphaproteobacteria	1.52212	35.4	chromosome:NZ_CP010522.1/CP010522.1	-	1	1372	1299	2/1/16	4/17/17	Complete Genome	University of Florida	SAMN03256334	GCA_001543305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/305/GCA_001543305.1_ASM154330v1	-	BT-0
Burkholderia mallei	13373	PRJNA344947	344947	Proteobacteria	Betaproteobacteria	5.50744	68.6	-	MKIU01	706	6039	5338	12/15/16	4/6/17	Contig	Volgograd Research Institute for Plague Control	SAMN05853556	GCA_001905275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/275/GCA_001905275.1_ASM190527v1	-	V-120
Bacillus thuringiensis	1428	PRJNA288912	288912	Terrabacteria group	Firmicutes	6.16799	34.9	-	LFXM01	94	6521	6123	9/22/15	4/4/17	Scaffold	Federal University of Itajuba (UNIFEI)	SAMN03839946	GCA_001296435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/435/GCA_001296435.1_ASM129643v1	26517667	147
Ralstonia solanacearum	305	PRJNA347357	347357	Proteobacteria	Betaproteobacteria	5.47242	67	-	MOLP01	189	4924	4617	11/7/16	4/5/17	Contig	University of Exeter	SAMN05879717	GCA_001870825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/825/GCA_001870825.1_ASM187082v1	-	PSS190
Vibrio cholerae HC-32A1	991956	PRJNA63919	63919	Proteobacteria	Gammaproteobacteria	4.03321	47.5	-	AGUO01	79	3845	3681	11/4/11	3/22/17	Scaffold	Institute for Genome Sciences	SAMN00262264	GCA_000234905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/905/GCA_000234905.1_ASM23490v1	-	HC-32A1
Clostridioides difficile	1496	PRJNA269819	269819	Terrabacteria group	Firmicutes	4.07517	28.5	-	LWLK01	77	3739	3638	10/17/16	3/20/17	Scaffold	The Genome Institute at Washington University	SAMN04526270	GCA_001857645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/645/GCA_001857645.1_ASM185764v1	-	HMSC19D05
Shigella boydii	621	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.24988	59.5	-	JVWX01	243	5109	4894	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03197219	GCA_001060695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/695/GCA_001060695.1_ASM106069v1	26230489	1252_SBOY
Francisella tularensis subsp. tularensis 80700075	1210520	PRJNA170750	170750	Proteobacteria	Gammaproteobacteria	1.80866	32.3	-	AMPW01	58	1920	1598	10/16/12	3/30/17	Contig	Dugway Proving Ground	SAMN02469757	GCA_000305875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/875/GCA_000305875.1_ASM30587v1	-	80700075
Brucella abortus 64/81	1169210	PRJNA173508	173508	Proteobacteria	Alphaproteobacteria	3.29494	57.2	-	AQJA01	3	3384	3150	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00839705	GCA_000370105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/105/GCA_000370105.1_Bruc_abor_64_81_V1	-	64/81
Xanthomonas citri subsp. citri	611301	PRJEB7159	306116	Proteobacteria	Gammaproteobacteria	5.52228	64.6	-	CCXZ01	98	5307	5234	12/16/15	12/16/15	Scaffold	Genoscope CEA	SAMEA2752223	GCA_001495715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/715/GCA_001495715.1_ASX_G_PRJEB7159_v1	-	-
Campylobacter fetus subsp. fetus	32019	PRJEB8721	292173	Proteobacteria	delta/epsilon subdivisions	1.73209	34.2	-	FAUY01	13	1812	1722	11/29/15	4/4/17	Scaffold	SC	SAMEA3310290	GCA_001486985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/486/985/GCA_001486985.1_17150_1_77	-	006A-0073
Xanthomonas oryzae pv. oryzae	64187	PRJNA269427	269427	Proteobacteria	Gammaproteobacteria	4.30383	63.9	-	JXEX01	425	4296	3449	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252535	GCA_001927845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/845/GCA_001927845.1_ASM192784v1	-	DXO-165
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.89846	38	-	MLKT01	157	1960	1758	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297007	GCA_001867465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/465/GCA_001867465.1_ASM186746v1	27118061	AWRIB1116
Streptococcus mitis 17/34	1340484	PRJNA206048	206048	Terrabacteria group	Firmicutes	1.87325	40.2	-	ASZZ01	51	1747	1539	7/16/13	1/8/14	Contig	"Research Institute of Physical-Chemical Medicine, Moscow, Russia"	SAMN02470848	GCA_000430305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/305/GCA_000430305.1_Smit.str17_34_v1.0	-	17/34
Vibrio parahaemolyticus	670	PRJNA233509	233509	Proteobacteria	Gammaproteobacteria	5.33835	45.3	-	LFUK01	20	5187	4282	8/19/15	4/11/17	Scaffold	Omics Solutions	SAMN02781335	GCA_001270805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/805/GCA_001270805.1_ASM127080v1	-	PMA109.5
Streptococcus agalactiae	1311	PRJNA296923	296923	Terrabacteria group	Firmicutes	2.16597	35.4	chromosome:NZ_CP013202.1/CP013202.1	-	1	2261	2083	11/30/15	3/18/17	Complete Genome	Hartnell College	SAMN04111187	GCA_001448985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/985/GCA_001448985.1_ASM144898v1	26823579	GBS ST-1
Streptococcus agalactiae CNCTC 10/84	1427374	PRJNA229124	229124	Terrabacteria group	Firmicutes	2.01384	35.4	chromosome:NZ_CP006910.1/CP006910.1	-	1	2094	1947	11/14/14	3/16/17	Complete Genome	IGS	SAMN03178022	GCA_000782855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/855/GCA_000782855.1_ASM78285v1	25540350	CNCTC 10/84
Clostridium botulinum C/D str. BKT12695	1443125	PRJNA233471	233471	Terrabacteria group	Firmicutes	2.75478	28.4064	plasmid p2CbBKT12695:NZ_CM003332.1/CM003332.1; plasmid p3CbBKT12695:NZ_CM003333.1/CM003333.1	JENP01	89	2680	2484	6/20/14	3/26/17	Contig	National Veterinary Institute (SVA)	SAMN02593752	GCA_000710585.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/585/GCA_000710585.3_BKT12695_1.0	25254374	BKT12695
Enterococcus faecalis T11	565640	PRJNA32949	32949	Terrabacteria group	Firmicutes	2.74872	37.7	-	ACAU01	13	2712	2625	5/20/09	3/22/17	Scaffold	Broad Institute	SAMN02595265	GCA_000157475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/475/GCA_000157475.1_ASM15747v1	-	T11
Streptococcus mutans TCI-268	1074179	PRJNA72097	72097	Terrabacteria group	Firmicutes	1.85568	36.9	-	AGMF01	92	1865	1756	10/6/11	3/22/17	Contig	JCVI	SAMN02436521	GCA_000229805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/805/GCA_000229805.2_SMUT7-NEX_8-268	-	TCI-268
Neisseria gonorrhoeae ATL_2011_01_17	1351783	PRJNA209493	209493	Proteobacteria	Betaproteobacteria	2.14537	52.3	-	ATQH01	351	2432	2202	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02338809	GCA_001026255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/255/GCA_001026255.1_ASM102625v1	-	ATL_2011_01_17
Enterococcus faecium P1140	1134831	PRJNA82051	82051	Terrabacteria group	Firmicutes	2.91532	37.7	-	AMAM01	194	2996	2841	9/4/12	3/23/17	Scaffold	Washington University	SAMN02299506	GCA_000295015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/015/GCA_000295015.1_ASM29501v1	-	P1140
Chlamydia psittaci	83554	PRJNA254934	254934	PVC group	Chlamydiae	1.23796	39	-	JPIH02	81	-	-	11/21/14	3/26/15	Scaffold	BGI	SAMN02905838	GCA_000786005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/005/GCA_000786005.2_ASM78600v2	25744990	HJ
Stenotrophomonas maltophilia	40324	PRJEB8824	307423	Proteobacteria	Gammaproteobacteria	4.36066	66.6	-	CVIW01	64	4040	3872	1/3/16	3/27/17	Contig	UMR5557	SAMEA3309460	GCA_001499715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/715/GCA_001499715.1_BurA1	-	-
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12654	41.2	-	CWAQ01	79	2056	1876	6/24/15	3/26/17	Contig	SC	SAMEA1032816	GCA_001176065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/065/GCA_001176065.1_6903_3_43	-	EQUI0092
Pasteurella multocida subsp. multocida	44283	PRJNA302563	302563	Proteobacteria	Gammaproteobacteria	2.21679	40.3	-	LUCY01	15	2076	1996	6/20/16	4/5/17	Scaffold	Sichuan Agricultural University	SAMN04274812	GCA_001670455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/670/455/GCA_001670455.1_ASM167045v1	-	RCAD0276
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.96894	46.7	-	JTIG01	57	2987	2772	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196649	GCA_001656635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/635/GCA_001656635.1_ASM165663v1	-	Lrh23
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31159	57.2358	chromosome 1:NZ_CP018558.1/CP018558.1; chromosome 2:NZ_CP018559.1/CP018559.1	-	2	3376	3143	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932917	GCA_002192175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/175/GCA_002192175.1_ASM219217v1	28388689	BwIM_TUR_51
Bacillus anthracis	1392	PRJNA252785	252785	Terrabacteria group	Firmicutes	5.22717	35.4	chromosome:CP008853.1	-	1	5510	5382	9/3/14	9/3/14	Complete Genome	State Key Laboratory of Pathogen and Biosecurity	SAMN02898388	GCA_000747335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/335/GCA_000747335.1_ASM74733v1	-	Cvac02
Bordetella bronchiseptica SBL-F6116	1331244	PRJNA202156	202156	Proteobacteria	Betaproteobacteria	5.06025	68.4	-	JHBT01	121	4813	4526	5/13/14	4/2/17	Contig	JCVI	SAMN02231291	GCA_000690755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/755/GCA_000690755.1_gbb48v01	25908122	SBL-F6116
Corynebacterium diphtheriae	1717	PRJNA360012	360012	Terrabacteria group	Actinobacteria	2.46997	53.6	-	MSTT01	56	2415	2013	1/29/17	4/10/17	Contig	"CMC, Vellore"	SAMN06198939	GCA_001974705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/974/705/GCA_001974705.1_ASM197470v1	-	WD126
Mycoplasma pneumoniae	2104	PRJNA291007	291007	Terrabacteria group	Tenericutes	0.821536	40	-	LHPR01	17	807	684	9/22/15	4/10/17	Scaffold	Centre for genomic regulation (CRG)	SAMN03897302	GCA_001296515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/515/GCA_001296515.1_ASM129651v1	26335586	Mympn_3163
Yersinia enterocolitica	630	PRJEB13626	384942	Proteobacteria	Gammaproteobacteria	4.41589	46.9	-	FKKJ01	148	4187	3881	5/1/17	5/9/17	Contig	IP	SAMEA3935395	GCA_900079855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/855/GCA_900079855.1_IP35466	-	-
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	3.97212	41.6	-	JJRA01	148	3427	3220	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708941	GCA_000980155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/155/GCA_000980155.1_gtlEnvA5udCFS	25756680	1.H.T.2.3
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.0954	59.8	-	JVMB01	164	4823	4712	7/10/15	3/26/17	Contig	University of Washington	SAMN03197501	GCA_001064455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/455/GCA_001064455.1_ASM106445v1	26230489	311_SMAR
Lactobacillus plantarum subsp. plantarum	337330	PRJNA245118	245118	Terrabacteria group	Firmicutes	3.35267	44.3	-	JMEL01	323	3265	2961	4/29/14	3/24/17	Contig	WIKIM	SAMN02732144	GCA_000648755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/755/GCA_000648755.1_LP_contig	24855305	wikim18
Mannheimia haemolytica	75985	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.58137	41	-	LQFR01	112	2646	2448	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366565	GCA_001930855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/855/GCA_001930855.1_ASM193085v1	-	327518MH
Campylobacter coli LMG 23342	887305	PRJNA52747	52747	Proteobacteria	delta/epsilon subdivisions	1.61655	31.4	-	AINO01	109	1666	1583	3/16/12	3/15/17	Contig	Cornell University	SAMN02428942	GCA_000254055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/055/GCA_000254055.2_ASM25405v2	-	LMG 23342
Burkholderia sp. MSMB0265	1637836	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.28601	67.1	-	LOXK01	144	6965	6338	1/21/16	4/11/17	Contig	Northern Arizona University	SAMN03449266	GCA_001524425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/425/GCA_001524425.1_ASM152442v1	-	MSMB0265
Propionibacterium acnes HL087PA1	765081	PRJNA49195	49195	Terrabacteria group	Actinobacteria	2.47486	60	-	ADXQ01	13	2490	2377	8/5/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189243	GCA_000145135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/135/GCA_000145135.1_ASM14513v1	-	HL087PA1
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.39269	32.7	-	CUCO01	75	2334	2233	3/31/15	3/26/17	Contig	SC	SAMEA1035042	GCA_001234205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/205/GCA_001234205.1_7067_4_34	-	26-4
Proteus mirabilis	584	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.00639	38.7	-	JVJQ01	138	3669	3518	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197564	GCA_001076695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/695/GCA_001076695.1_ASM107669v1	26230489	373_PMIR
Enterobacter cloacae str. Hanford	1340854	PRJNA206261	206261	Proteobacteria	Gammaproteobacteria	4.83215	54.5	-	ATCK01	62	4667	4474	7/11/13	3/24/17	Contig	Oak Ridge National Lab	SAMN02212350	GCA_000422225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/422/225/GCA_000422225.1_E_cloacae_Hanford_v1.0	-	Hanford
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.86203	55.7	-	FLAC01	61	5720	5425	5/19/16	2/25/17	Scaffold	SC	SAMEA2273876	GCA_900083755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/755/GCA_900083755.1_12082_2_12	-	2880STDY5682802
Cronobacter sakazakii	28141	PRJNA329459	329459	Proteobacteria	Gammaproteobacteria	4.56773	57.1	-	MBRO01	475	4267	4040	4/17/17	4/21/17	Contig	Guangdong Institute of Microbiology	SAMN05412997	GCA_002094475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/475/GCA_002094475.1_ASM209447v1	28057934	cro1509B2
Lactobacillus salivarius	1624	PRJNA357984	357984	Terrabacteria group	Firmicutes	1.94558	32.8	-	NBES01	87	1886	1739	4/5/17	4/8/17	Scaffold	University College Cork	SAMN06163255	GCA_002079705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/705/GCA_002079705.1_ASM207970v1	-	CCuG44481
Mycobacterium abscessus 5S-0921	1001732	PRJNA65193	65193	Terrabacteria group	Actinobacteria	5.25465	64	-	AKUQ01	12	5372	5202	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00672660	GCA_000270965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/965/GCA_000270965.1_ASM27096v1	-	5S-0921
Vibrio sp. V11_P1A41T118	1938666	PRJNA361511	361511	Proteobacteria	Gammaproteobacteria	3.6247	45	-	NDIG01	366	3398	3177	8/4/17	8/6/17	Scaffold	Instituto de ecologia	SAMN06251407	GCA_002241265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/265/GCA_002241265.1_ASM224126v1	-	V11_P1A41T118
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.5877	63.3	-	DBZB01	380	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06457418	GCA_002311715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/715/GCA_002311715.1_ASM231171v1	28894102	-
Aeromonas hydrophila	644	PRJNA343741	343741	Proteobacteria	Gammaproteobacteria	4.98829	60.1	-	MJGY01	27	4393	3978	1/9/17	1/9/17	Scaffold	"Institute of Hydrobiology, Chinese Academy of Sciences"	SAMN05792599	GCA_001939675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/675/GCA_001939675.1_ASM193967v1	-	4LNG101
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.55501	67.3	-	LPAS01	116	6932	6555	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449355	GCA_001526875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/875/GCA_001526875.1_ASM152687v1	-	MSMB1623WGS
Flavobacterium psychrophilum	96345	PRJNA262098	262098	FCB group	Bacteroidetes/Chlorobi group	2.89915	32.5	-	JRWC01	7	-	-	12/16/14	9/22/15	Contig	Washington State University	SAMN03079823	GCA_000801625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/625/GCA_000801625.1_ASM80162v1	26377311	CR
Yersinia ruckeri	29486	PRJNA344460	344460	Proteobacteria	Gammaproteobacteria	3.82678	47.4	-	MKFJ01	49	3445	3303	10/2/16	4/5/17	Scaffold	UNIVERSIDAD DE OVIEDO	SAMN05824028	GCA_001750505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/505/GCA_001750505.1_ASM175050v1	-	150
Lactobacillus paracasei subsp. paracasei Lpp48	1256217	PRJNA178445	178445	Terrabacteria group	Firmicutes	2.8121	46.1	-	ANLG01	998	3248	3220	6/11/13	11/13/14	Contig	Danone Research	SAMN02641496	GCA_000410115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/115/GCA_000410115.1_ASM41011v1	23894338	Lpp48
Streptococcus oralis subsp. oralis	1891914	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.99977	41.1	-	NCUI01	25	2038	1924	4/18/17	4/21/17	Scaffold	Slagelse Hospital	SAMN06705626	GCA_002096435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/435/GCA_002096435.1_ASM209643v1	27325438	Y_11577_11
Klebsiella variicola	244366	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	5.33619	57.4	-	DFSA01	43	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452677	GCA_002378425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/425/GCA_002378425.1_ASM237842v1	28894102	-
Pseudoalteromonas sp. R3	1709477	PRJNA294510	294510	Proteobacteria	Gammaproteobacteria	5.83968	47.6	-	LJDF01	39	4979	4769	9/14/15	4/11/17	Scaffold	Zhejiang University of Technology	SAMN04026692	GCA_001282135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/135/GCA_001282135.1_ASM128213v1	26586885	R3
Bacillus anthracis	1392	PRJNA252784	252784	Terrabacteria group	Firmicutes	5.22543	35.4	chromosome:CP008854.1	-	1	5641	5513	9/3/14	6/26/15	Complete Genome	State Key Laboratory of Pathogen and Biosecurity	SAMN02898318	GCA_000747375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/375/GCA_000747375.1_ASM74737v1	-	Han
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	4.03255	38.4	-	MDHY01	51	3961	3797	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022859	GCA_001706135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/135/GCA_001706135.1_ASM170613v1	-	UKK-0520
Citrobacter freundii	546	PRJNA335390	335390	Proteobacteria	Gammaproteobacteria	5.30228	51.8	-	MCOM01	128	5263	5017	11/17/16	4/5/17	Contig	Hospital Universitary 12 de octubre	SAMN05441395	GCA_001880775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/775/GCA_001880775.1_ASM188077v1	-	CF4_ST90
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.80127	55.3	-	JZXQ01	79	4733	4527	3/19/15	3/25/17	Contig	JCVI	SAMN03283685	GCA_000957405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/405/GCA_000957405.1_ASM95740v1	-	44888
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.36457	54.8	-	LDBP01	80	5324	5037	5/21/15	4/6/17	Contig	JCVI	SAMN03495952	GCA_001011615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/615/GCA_001011615.1_ASM101161v1	-	GN02770
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.07199	64.2	-	FVVW01	18	5053	4906	3/10/17	3/18/17	Contig	SC	SAMEA1971359	GCA_900140215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/215/GCA_900140215.1_10665_2_75	-	536
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.41499	66.8	-	LPEE01	78	7822	7453	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449452	GCA_001529145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/145/GCA_001529145.1_ASM152914v1	-	MSMB1213WGS
Pseudomonas sp. HMSC05H02	1581118	PRJNA269887	269887	Proteobacteria	Gammaproteobacteria	6.40131	66.4	-	JZWM01	151	6165	5807	3/13/15	4/10/17	Scaffold	The Genome Institute at Washington University	SAMN03287032	GCA_000952805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/805/GCA_000952805.1_ASM95280v1	-	HMSC05H02
Streptomyces sp. HPH0547	1203592	PRJNA169487	169487	Terrabacteria group	Actinobacteria	7.88797	72.5	-	ATCE01	12	6664	6320	6/14/13	3/9/17	Scaffold	Broad Institute	SAMN02596979	GCA_000411495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/495/GCA_000411495.1_Stre_sp_HPH0547_V1	-	HPH0547
Bacillus sp. Root920	1736608	PRJNA297942	297942	Terrabacteria group	Firmicutes	3.67626	41.6	-	LMJV01	14	3768	3624	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155877	GCA_001429445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/445/GCA_001429445.1_Root920	26633631	Root920
Acinetobacter sp. TG19627	1221303	PRJNA172720	172720	Proteobacteria	Gammaproteobacteria	4.52465	40.8	-	AMJM01	109	4360	4203	10/2/12	5/18/17	Contig	Translational Genomics Research Institute	SAMN02471257	GCA_000302415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/415/GCA_000302415.1_ASM30241v1	-	TG19627
Clostridium sp. C105KSO14	1776046	PRJEB12302	308711	Terrabacteria group	Firmicutes	5.48134	49.1	-	FBWO01	341	5511	4902	1/9/16	8/2/17	Contig	UNIVERSITY OF WARWICK	SAMEA3722993	GCA_001517465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/465/GCA_001517465.1_C105KES14_ass	-	-
Sphingomonas sp. Leaf67	1736230	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.19291	65.9	-	LMLP01	25	3812	3665	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151610	GCA_001421965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/965/GCA_001421965.1_Leaf67	26633631	Leaf67
Synechococcus sp. REDSEA-S02_B4	1811576	PRJNA289734	289734	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.7763	62.8	-	LURK01	81	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534665	GCA_001628325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/325/GCA_001628325.1_ASM162832v1	27377622	-
Rhodococcus sp. 06-1477-1A	2022497	PRJNA395383	395383	Terrabacteria group	Actinobacteria	6.04805	64.6	-	NOYQ01	33	5681	5520	8/18/17	8/21/17	Contig	Oregon State University	SAMN07376367	GCA_002258865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/865/GCA_002258865.1_ASM225886v1	-	06-1477-1A
Enterobacter sp. MGH 8	1329817	PRJNA201923	201923	Proteobacteria	Gammaproteobacteria	4.9851	55	-	AXLJ01	4	4904	4623	10/18/13	4/2/17	Contig	Broad Institute	SAMN02138548	GCA_000474805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/805/GCA_000474805.1_Ente_cloa_complex_MGH_8_V1_PacBio	-	MGH 8
Staphylococcus sp. HMSC065D05	1739401	PRJNA300051	300051	Terrabacteria group	Firmicutes	2.51824	31.9	-	LTXC01	67	2488	2353	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480067	GCA_001813195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/195/GCA_001813195.1_ASM181319v1	-	HMSC065D05
Corynebacterium sp. HMSC065D07	1739264	PRJNA299914	299914	Terrabacteria group	Actinobacteria	2.65896	61	-	LTHJ01	58	2485	2365	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477578	GCA_001810695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/695/GCA_001810695.1_ASM181069v1	-	HMSC065D07
Arthrobacter sp. SRS-W-1-2016	1930254	PRJNA352261	352261	Terrabacteria group	Actinobacteria	4.5647	64.1	-	MTPV01	93	4271	4099	3/2/17	3/4/17	Contig	Florida A&M University	SAMN06030390	GCA_002009585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/585/GCA_002009585.1_ASM200958v1	-	SRS-W-1-2016
Bradyrhizobium sp. BR 10245	1497613	PRJNA301972	301972	Proteobacteria	Alphaproteobacteria	10.1111	63.2	-	LUUB01	133	9486	8827	5/10/16	4/12/17	Scaffold	Embrapa Agrobiologia	SAMN04448272	GCA_001641635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/635/GCA_001641635.1_ASM164163v1	-	BR 10245
Streptococcus sp. HMSC061E03	1739421	PRJNA300071	300071	Terrabacteria group	Firmicutes	2.21499	41.6	-	LTWN01	30	2149	2041	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480345	GCA_001813505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/505/GCA_001813505.1_ASM181350v1	-	HMSC061E03
Mycobacterium sp. GA-1331	1772278	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.20357	66.8	-	LQIO01	49	4984	4845	1/6/16	4/11/17	Contig	JCVI	SAMN04349495	GCA_001499915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/915/GCA_001499915.1_ASM149991v1	-	GA-1331
Prevotella sp. CAG:755	1262935	PRJEB997	206787	FCB group	Bacteroidetes/Chlorobi group	2.28211	56.4	-	CAXR01	114	1975	1936	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138451	GCA_000431275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/275/GCA_000431275.1_MGS755	-	-
Enterococcus sp. 6C8_DIV0013	1987385	PRJNA313452	313452	Terrabacteria group	Firmicutes	3.0218	33.1	-	NGMT01	13	2850	2740	5/16/17	5/24/17	Scaffold	Broad Institute	SAMN04633997	GCA_002140795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/795/GCA_002140795.1_ASM214079v1	-	6C8_DIV0013
Methylobacterium sp. ME121	1604132	PRJDB3462	277938	Proteobacteria	Alphaproteobacteria	7.09698	71.1	-	BBUX01	197	6726	6676	3/10/15	10/6/15	Contig	Toyo University	SAMD00024962	GCA_000974725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/725/GCA_000974725.1_ASM97472v1	26337893	ME121
Paenibacillus sp. DMB5	1780103	PRJNA308890	308890	Terrabacteria group	Firmicutes	7.45722	51.2	-	LRAC01	174	6743	6090	1/19/16	4/11/17	Contig	SARDAR PATEL UNIVERSITY	SAMN04417243	GCA_001517085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/085/GCA_001517085.1_ASM151708v1	27034501	DMB5
Thioalkalivibrio sp. ALJ11	1158760	PRJNA176572	176572	Proteobacteria	Gammaproteobacteria	2.77691	66	-	AQXP01	55	2667	2546	4/22/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441383	GCA_000376925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/925/GCA_000376925.1_ASM37692v1	-	ALJ11
Ruminococcus sp. UBA4383	1947428	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.20987	40.1	-	DGRR01	235	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457225	GCA_002389995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/995/GCA_002389995.1_ASM238999v1	28894102	-
Bacteroides sp. UNK.MGS-14	1638780	PRJNA277012	277012	FCB group	Bacteroidetes/Chlorobi group	5.13264	45.5	-	LBCF01	411	-	-	4/24/15	6/10/15	Scaffold	The Mayo Clinic	SAMN03456682	GCA_000980595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/595/GCA_000980595.1_ASM98059v1	26021920	-
Prochlorococcus sp. scB245a_519A13	1471509	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.14956	31.1	-	JFNH01	222	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671380	GCA_000634415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/415/GCA_000634415.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. P0098	1895601	PRJNA341019	341019	Proteobacteria	delta/epsilon subdivisions	1.60364	33.5	-	MJKF01	21	1639	1556	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687039	GCA_002138705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/705/GCA_002138705.1_ASM213870v1	28854596	P0098
Microbacterium sp. RU1D	1907411	PRJEB18897	360764	Terrabacteria group	Actinobacteria	3.38913	70.7	-	FTPQ01	7	3164	3071	1/19/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05880579	GCA_900156435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/435/GCA_900156435.1_IMG-taxon_2710264749_annotated_assembly	-	RU1D
Rhizobium sp. P44RR-XXIV	1921145	PRJNA354620	354620	Proteobacteria	Alphaproteobacteria	7.44678	59.5	-	MPVZ01	119	7077	6579	2/13/17	4/17/17	Contig	Hasselt University	SAMN06049265	GCA_001999485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/485/GCA_001999485.1_ASM199948v1	-	P44RR-XXIV
Mesorhizobium sp. LSHC440B00	1287308	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.46545	62.5	-	AYVS01	52	6368	5921	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359688	GCA_000503095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/095/GCA_000503095.1_Mloti_LSHC440B00	-	LSHC440B00
Bacillus velezensis	492670	PRJNA243331	243331	Terrabacteria group	Firmicutes	4.05201	46.2	-	LYNA01	105	4081	3929	8/23/16	3/22/17	Contig	FDA/CFSAN	SAMN04990135	GCA_001709045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/045/GCA_001709045.1_ASM170904v1	-	CFSAN034338
Gilliamella apicola	1196095	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.94285	34	-	NARX01	328	2696	2554	5/16/17	5/23/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603525	GCA_002141815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/815/GCA_002141815.1_ASM214181v1	-	AW11
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.55897	57.5	-	FXNR01	83	5606	5252	4/28/17	5/6/17	Scaffold	SC	SAMEA2609361	GCA_900180895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/895/GCA_900180895.1_14936_2_72	-	3189STDY5864926
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.81257	32.3	-	FQRK01	16	2818	2647	11/25/16	4/6/17	Contig	SC	SAMEA3449096	GCA_900128245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/245/GCA_900128245.1_17175_3_40	-	3688STDY6125088
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.56197	67.7	-	LPMY01	103	6908	6559	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449685	GCA_001534385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/385/GCA_001534385.1_ASM153438v1	-	MSMB1511WGS
Xanthomonas axonopodis pv. manihotis str. IBSBF 2667	1185679	PRJNA163753	163753	Proteobacteria	Gammaproteobacteria	4.91306	65.1	-	AKDK01	138	4366	4045	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090315	GCA_000266745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/745/GCA_000266745.1_IBSBF2667	22699502	IBSBF 2667
Xanthomonas axonopodis pv. manihotis str. IBSBF 2670	1185680	PRJNA163755	163755	Proteobacteria	Gammaproteobacteria	4.9029	65.1	-	AKDL01	139	4369	4047	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090316	GCA_000266765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/765/GCA_000266765.1_IBSBF2670	22699502	IBSBF 2670
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.62608	67.6	-	LPMS01	114	6947	6589	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449678	GCA_001534505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/505/GCA_001534505.1_ASM153450v1	-	MSMB846WGS
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79509	32.3	-	FQRL01	13	2801	2625	11/25/16	4/6/17	Contig	SC	SAMEA3449097	GCA_900128255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/255/GCA_900128255.1_17175_3_41	-	3688STDY6125089
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.79994	57	-	FXMK01	110	5881	5492	4/28/17	5/6/17	Scaffold	SC	SAMEA2609367	GCA_900180915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/915/GCA_900180915.1_14936_2_74	-	3189STDY5864928
Gilliamella apicola	1196095	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.90865	34	-	NARW01	88	2630	2529	5/16/17	5/23/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603524	GCA_002141855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/855/GCA_002141855.1_ASM214185v1	-	N2
Bacillus velezensis	492670	PRJNA243331	243331	Terrabacteria group	Firmicutes	4.20953	45.9	-	LYNB01	53	4210	4046	8/23/16	3/22/17	Contig	FDA/CFSAN	SAMN04990136	GCA_001709055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/055/GCA_001709055.1_ASM170905v1	-	CFSAN034339
Mesorhizobium sp. LSJC255A00	1287313	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.81178	62.4	-	AYVR01	66	6715	6130	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359689	GCA_000503115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/115/GCA_000503115.1_Mloti_LSJC255A00	-	LSJC255A00
Rhizobium sp. R635	1764275	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	5.82311	61.8	-	LOKX01	37	5607	5440	6/29/17	7/1/17	Contig	Centro de Ciencias Genomicas UNAM	SAMN04304759	GCA_002211285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/285/GCA_002211285.1_ASM221128v1	-	R635
Microbacterium sp. RURRCA19A	1907391	PRJEB18900	360703	Terrabacteria group	Actinobacteria	3.67186	70.3	-	FTNQ01	15	3446	3349	1/14/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05880568	GCA_900156455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/455/GCA_900156455.1_IMG-taxon_2710264756_annotated_assembly	-	RURRCA19A
Campylobacter sp. P0108	1895605	PRJNA341023	341023	Proteobacteria	delta/epsilon subdivisions	1.7472	33.4	-	MJKJ01	10	1783	1705	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687043	GCA_002138715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/715/GCA_002138715.1_ASM213871v1	28854596	P0108
Prochlorococcus sp. scB245a_519B7	1471510	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.698939	31.5	-	JFNI01	97	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671381	GCA_000634435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/435/GCA_000634435.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Bacteroides sp. SM1_62	1703351	PRJNA270657	270657	FCB group	Bacteroidetes/Chlorobi group	2.57673	45.3	-	LJVC01	307	2317	2092	9/30/15	9/30/15	Scaffold	University of Texas	SAMN03994188	GCA_001304045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/045/GCA_001304045.1_ASM130404v1	25922666	-
Ruminococcus sp. UBA4385	1947429	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.33981	45.6	-	DGRP01	178	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457223	GCA_002391065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/065/GCA_002391065.1_ASM239106v1	28894102	-
Thioalkalivibrio sp. AKL8	1158156	PRJNA185234	185234	Proteobacteria	Gammaproteobacteria	2.84287	66.4	-	AQYF01	14	2719	2613	4/23/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02441726	GCA_000380525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/525/GCA_000380525.1_ASM38052v1	-	AKL8
Paenibacillus sp. LPB0068	1763538	PRJNA310816	310816	Terrabacteria group	Firmicutes	4.64556	39.8	-	LSFN01	45	4349	4172	5/5/16	4/12/17	Contig	Korea University	SAMN04453328	GCA_001637335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/335/GCA_001637335.1_ASM163733v1	-	LPB0068
Methylobacterium sp. SCN 67-24	1660110	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	4.93161	67.1	-	MEEG01	304	4824	4492	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652453	GCA_001724885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/885/GCA_001724885.1_ASM172488v1	26031303	-
Enterococcus sp. 7D2_DIV0200	1834187	PRJNA313452	313452	Terrabacteria group	Firmicutes	4.00919	36.8	-	NGNB01	20	3721	3502	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634083	GCA_002140835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/835/GCA_002140835.1_ASM214083v1	-	7D2_DIV0200
Prevotella sp. CAG:386	1262925	PRJEB861	206746	FCB group	Bacteroidetes/Chlorobi group	2.61899	46.8	-	CBEZ01	214	2174	2132	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138483	GCA_000431915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/915/GCA_000431915.1_MGS386	-	-
Mycobacterium sp. IS-1744	1772281	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.13055	66.9	-	LQIR01	69	5015	4880	1/6/16	4/11/17	Contig	JCVI	SAMN04349498	GCA_001499925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/925/GCA_001499925.1_ASM149992v1	-	IS-1744
Streptococcus sp. HMSC065C01	1739422	PRJNA300072	300072	Terrabacteria group	Firmicutes	2.18999	41.8	-	LTWM01	51	2134	2022	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480358	GCA_001813525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/525/GCA_001813525.1_ASM181352v1	-	HMSC065C01
Bradyrhizobium sp. BR10280	1399419	PRJNA318391	318391	Proteobacteria	Alphaproteobacteria	8.6988	63.8	-	LWIG01	69	8168	7552	3/22/17	3/24/17	Scaffold	Embrapa Agrobiologia	SAMN04849207	GCA_002068095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/068/095/GCA_002068095.1_ASM206809v1	-	p9-20
Arthrobacter sp. KI72	388925	PRJDB5529	377701	Terrabacteria group	Actinobacteria	4.56857	63.5	-	BDMH01	105	4270	4062	3/1/17	3/22/17	Contig	"Department of Material Science and Chemistry, Graduate School of Engineering, University of Hyogo"	SAMD00074878	GCA_002049485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/485/GCA_002049485.1_ASM204948v1	-	KI72
Corynebacterium sp. HMSC062A03	1739285	PRJNA299935	299935	Terrabacteria group	Actinobacteria	2.6062	60.6	-	LTGR01	66	2425	2299	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477599	GCA_001811145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/145/GCA_001811145.1_ASM181114v1	-	HMSC062A03
Staphylococcus sp. HMSC065D11	1739404	PRJNA300054	300054	Terrabacteria group	Firmicutes	2.39601	32	-	LTXA01	72	2333	2227	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480063	GCA_001813245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/245/GCA_001813245.1_ASM181324v1	-	HMSC065D11
Enterobacter sp. DC1	314330	PRJNA217835	217835	Proteobacteria	Gammaproteobacteria	4.59064	56	-	AZUA01	18	4485	4314	2/10/14	4/17/17	Contig	Monash University	SAMN02951907	GCA_000568075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/075/GCA_000568075.1_DC1_v1	24625871	DC1
Rhodococcus sp. 15-725-2-2b	2023139	PRJNA395383	395383	Terrabacteria group	Actinobacteria	6.11777	64.6	-	NPFL01	33	5738	5577	8/18/17	8/21/17	Contig	Oregon State University	SAMN07414583	GCA_002259075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/075/GCA_002259075.1_ASM225907v1	-	15-725-2-2b
Sphingomonas sp. Leaf231	1736301	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	3.7332	67	-	LMLS01	8	3448	3338	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151691	GCA_001421995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/995/GCA_001421995.1_Leaf231	26633631	Leaf231
Clostridium sp. AT4	1720194	PRJEB12383	308819	Terrabacteria group	Firmicutes	3.41269	46.5	-	FCEY01	8	3267	3092	1/15/16	4/6/17	Contig	URMITE	SAMEA3725798	GCA_001517625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/625/GCA_001517625.1_Clostridium_bouchedurhonense	-	AT5
Acinetobacter sp. TG2027	1221304	PRJNA172721	172721	Proteobacteria	Gammaproteobacteria	3.92724	38.7	-	AMJN01	66	3807	3621	10/2/12	4/6/17	Contig	Translational Genomics Research Institute	SAMN02471269	GCA_000302435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/435/GCA_000302435.1_ASM30243v1	-	TG2027
Bacillus sp. Root11	1736425	PRJNA297942	297942	Terrabacteria group	Firmicutes	6.6217	34.8	-	LMJP01	51	7108	6660	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155694	GCA_001429465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/465/GCA_001429465.1_Root11	26633631	Root11
Streptomyces sp. CNT318	1288079	PRJNA187951	187951	Terrabacteria group	Actinobacteria	7.2842	72.8	-	AUKN01	59	6297	5996	7/10/13	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440809	GCA_000424765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/765/GCA_000424765.1_ASM42476v1	-	CNT318
Pseudomonas sp. 10B238	1586417	PRJNA270555	270555	Proteobacteria	Gammaproteobacteria	4.93176	60.2	-	JWTL01	72	4602	4437	3/16/15	4/10/17	Scaffold	Chinese Academy of Sciences	SAMN03267211	GCA_000970615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/615/GCA_000970615.1_ASM97061v1	-	10B238
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.58503	66.7	-	LPFA01	67	7997	7634	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449474	GCA_001529525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/525/GCA_001529525.1_ASM152952v1	-	MSMB1339WGS
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.8557	64	-	FVXU01	45	4795	4590	3/10/17	3/18/17	Contig	SC	SAMEA1973616	GCA_900141195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/195/GCA_900141195.1_10702_1_82	-	695
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.28817	55	-	LDBO01	69	5238	4997	5/21/15	4/6/17	Contig	JCVI	SAMN03495951	GCA_001011625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/625/GCA_001011625.1_ASM101162v1	-	GN02761
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.02607	55	-	LABB01	65	4944	4722	3/19/15	3/25/17	Contig	JCVI	SAMN03283317	GCA_000957445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/445/GCA_000957445.1_ASM95744v1	-	28132
Citrobacter freundii	546	PRJNA335394	335394	Proteobacteria	Gammaproteobacteria	5.41627	51.6	-	MCON01	201	5490	5213	11/17/16	4/5/17	Contig	Hospital Universitary 12 de octubre	SAMN05441405	GCA_001880795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/795/GCA_001880795.1_ASM188079v1	-	CF6_ST18
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	4.08258	38.7	-	MDHX01	52	4035	3870	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022858	GCA_001706155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/155/GCA_001706155.1_ASM170615v1	-	UKK-0432
Streptococcus agalactiae COH1	342616	PRJEB5232	243863	Terrabacteria group	Firmicutes	2.06507	35.4	chromosome I:NZ_HG939456.1/HG939456.1	-	1	2123	1939	4/6/14	3/16/17	Complete Genome	IP	SAMEA3139000	GCA_000689235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/235/GCA_000689235.1_GBCO_p1	25088811	COH1
Pseudoalteromonas sp. H100	1348394	PRJNA209414	209414	Proteobacteria	Gammaproteobacteria	4.04088	39.7	-	LODK01	29	3692	3521	12/15/15	4/11/17	Scaffold	University of Arizona	SAMN04293674	GCA_001468185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/185/GCA_001468185.1_ASM146818v1	26868390	H100
Klebsiella variicola	244366	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	5.36752	57.4	-	DGAC01	37	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457337	GCA_002382305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/305/GCA_002382305.1_ASM238230v1	28894102	-
Streptococcus oralis subsp. oralis	1891914	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.92137	41.5	-	NCUL01	8	1900	1803	4/18/17	4/21/17	Scaffold	Slagelse Hospital	SAMN06705623	GCA_002096455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/455/GCA_002096455.1_ASM209645v1	27325438	RH_50443_09
Lactobacillus paracasei subsp. paracasei Lpp126	1256206	PRJNA178434	178434	Terrabacteria group	Firmicutes	2.70265	46.1	-	ANKC01	1355	3421	3393	6/11/13	11/13/14	Contig	Danone Research	SAMN02469721	GCA_000410355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/355/GCA_000410355.1_ASM41035v1	23894338	Lpp126
Flavobacterium psychrophilum	96345	PRJNA262097	262097	FCB group	Bacteroidetes/Chlorobi group	2.89731	32.5	-	JRWB01	25	-	-	12/16/14	9/22/15	Contig	Washington State University	SAMN03079822	GCA_000801645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/645/GCA_000801645.1_ASM80164v1	26377311	CN
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.19005	67.4	-	LPBM01	96	6468	6132	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449375	GCA_001526915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/915/GCA_001526915.1_ASM152691v1	-	MSMB1812WGS
Aeromonas hydrophila	644	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.25378	61.6	-	DBMF01	282	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453168	GCA_002297625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/625/GCA_002297625.1_ASM229762v1	28894102	-
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.41919	61.7	-	DBZE01	23	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06454627	GCA_002311755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/755/GCA_002311755.1_ASM231175v1	28894102	-
Vibrio sp. V14_P6S14T42	1938668	PRJNA361511	361511	Proteobacteria	Gammaproteobacteria	3.84993	44.7	-	NDII01	112	3616	3411	8/4/17	8/6/17	Scaffold	Instituto de ecologia	SAMN06251409	GCA_002241285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/285/GCA_002241285.1_ASM224128v1	-	V14_P6S14T42
Mycobacterium abscessus 6G-0125-R	1001740	PRJNA65211	65211	Terrabacteria group	Actinobacteria	5.13942	64.1	-	AKUE01	5	5167	5079	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00672655	GCA_000270985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/985/GCA_000270985.1_ASM27098v1	-	6G-0125-R
Lactobacillus salivarius	1624	PRJNA357984	357984	Terrabacteria group	Firmicutes	1.93333	32.8	-	NBET01	67	1933	1801	4/5/17	4/8/17	Scaffold	University College Cork	SAMN06163254	GCA_002079715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/715/GCA_002079715.1_ASM207971v1	-	CCuG38008
Cronobacter sakazakii	28141	PRJNA329459	329459	Proteobacteria	Gammaproteobacteria	4.32634	57.2	-	MBRQ01	373	4200	3907	4/17/17	4/21/17	Contig	Guangdong Institute of Microbiology	SAMN05412994	GCA_002094485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/485/GCA_002094485.1_ASM209448v1	28057934	cro360W
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.26598	54.8	-	FKYW01	54	6100	5837	5/19/16	2/25/17	Scaffold	SC	SAMEA2273589	GCA_900083765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/765/GCA_900083765.1_12045_6_56	-	2880STDY5682504
Enterobacter cloacae S611	1399146	PRJNA218558	218558	Proteobacteria	Gammaproteobacteria	4.43725	56.2	-	AXOM01	53	4131	3957	11/13/13	3/24/17	Contig	Los Alamos National Laboratory	SAMN02470260	GCA_000496775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/775/GCA_000496775.1_EDP2a	25502660	S611
Proteus mirabilis	584	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.88325	38.6	-	JVHX01	104	3611	3448	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197609	GCA_001076705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/705/GCA_001076705.1_ASM107670v1	26230489	418_PMIR
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.55603	32.6	-	CUHQ01	78	2532	2414	3/31/15	3/26/17	Contig	SC	SAMEA1035099	GCA_001234345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/345/GCA_001234345.1_7068_7_8	-	2111
Propionibacterium acnes HL083PA2	765088	PRJNA49209	49209	Terrabacteria group	Actinobacteria	2.4779	60	-	ADXT01	14	2494	2369	8/5/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189241	GCA_000145155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/155/GCA_000145155.1_ASM14515v1	-	HL083PA2
Burkholderia sp. MSMB2040	1637838	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.28875	67.1	-	LOXQ01	139	6976	6345	1/21/16	4/11/17	Contig	Northern Arizona University	SAMN03449273	GCA_001524525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/525/GCA_001524525.1_ASM152452v1	-	MSMB2040
Campylobacter coli LMG 23344	887306	PRJNA52749	52749	Proteobacteria	delta/epsilon subdivisions	1.78416	31.1	-	AINP01	192	1869	1750	3/16/12	3/15/17	Contig	Cornell University	SAMN02428974	GCA_000254075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/075/GCA_000254075.2_ASM25407v2	-	LMG 23344
Mannheimia haemolytica	75985	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.65263	41	-	LQGA01	119	2749	2583	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366574	GCA_001930935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/935/GCA_001930935.1_ASM193093v1	-	3483MH
Lactobacillus plantarum	1590	PRJNA239498	239498	Terrabacteria group	Firmicutes	3.44287	44.3	-	JHWA01	48	3355	3068	4/8/14	3/24/17	Contig	DOE Joint Genome Institute	SAMN02743874	GCA_000687495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/495/GCA_000687495.1_ASM68749v1	-	AG30
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.09923	59.7	-	JVDI01	89	4859	4762	7/10/15	3/26/17	Contig	University of Washington	SAMN03197728	GCA_001065325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/325/GCA_001065325.1_ASM106532v1	26230489	532_SMAR
Methanosarcina mazei	2209	PRJNA242781	242781	Euryarchaeota	Methanomicrobia	4.08598	41.6	-	JJRB01	142	3523	3298	4/23/15	4/3/17	Scaffold	University of Illinois at Urbana-Champaign	SAMN02708942	GCA_000980175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/175/GCA_000980175.1_gtlEnvA5udCFS	25756680	1.H.T.2.5
Yersinia enterocolitica	630	PRJEB13626	384942	Proteobacteria	Gammaproteobacteria	4.41581	46.9	-	FKKT01	151	4185	3885	5/1/17	5/9/17	Contig	IP	SAMEA3935396	GCA_900079865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/865/GCA_900079865.1_IP35467	-	-
Mycoplasma pneumoniae	2104	PRJNA291007	291007	Terrabacteria group	Tenericutes	0.82183	40	-	LHPQ01	17	806	688	9/22/15	4/10/17	Scaffold	Centre for genomic regulation (CRG)	SAMN03897301	GCA_001296525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/525/GCA_001296525.1_ASM129652v1	26335586	Mympn_2882
Corynebacterium diphtheriae	1717	PRJNA360015	360015	Terrabacteria group	Actinobacteria	2.4909	53.6	-	MSTU01	64	2444	2022	1/29/17	4/10/17	Contig	"CMC, Vellore"	SAMN06198940	GCA_001974725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/974/725/GCA_001974725.1_ASM197472v1	-	WD128
Bordetella bronchiseptica MBORD731	1331232	PRJNA202144	202144	Proteobacteria	Betaproteobacteria	5.13263	68.3	-	JGXS01	52	4876	4763	5/12/14	4/2/17	Contig	JCVI	SAMN02231430	GCA_000698985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/985/GCA_000698985.1_gbb36v01	25908122	MBORD731
Streptococcus agalactiae ILRI005	1309807	PRJEB1694	205689	Terrabacteria group	Firmicutes	2.10976	35.4	chromosome I:NC_021486.1/HF952105.1	-	1	2214	1998	5/28/13	3/15/17	Complete Genome	SLU-GBC	SAMEA2272371	GCA_000427075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/075/GCA_000427075.1_ILRI005	23868134	ILRI005
Brucella melitensis	29459	PRJNA347914	347914	Proteobacteria	Alphaproteobacteria	3.31435	57.1716	chromosome 1:NZ_CP018570.1/CP018570.1; chromosome 2:NZ_CP018571.1/CP018571.1	-	2	3373	3145	6/13/17	6/15/17	Chromosome	"Bundeswehr, Institute of Microbiology"	SAMN05932932	GCA_002192195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/195/GCA_002192195.1_ASM219219v1	28388689	BwIM_TUR_30
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.96679	46.7	-	JTIH01	52	3033	2810	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196648	GCA_001656655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/655/GCA_001656655.1_ASM165665v1	-	Lrh22
Pasteurella multocida subsp. multocida	44283	PRJNA300371	300371	Proteobacteria	Gammaproteobacteria	2.26791	40.3	-	LUDC01	15	2119	2038	6/20/16	4/5/17	Scaffold	Sichuan Agricultural University	SAMN04219585	GCA_001670525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/670/525/GCA_001670525.1_ASM167052v1	-	ATCC 1662
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12674	41.2	-	CWEF01	72	2056	1873	6/24/15	3/26/17	Contig	SC	SAMEA1032817	GCA_001176085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/085/GCA_001176085.1_6903_8_54	-	EQUI0199
Stenotrophomonas maltophilia	40324	PRJEB8824	307423	Proteobacteria	Gammaproteobacteria	4.63858	66.3	-	CVIV01	59	4274	4109	1/3/16	4/5/17	Contig	UMR5557	SAMEA3309462	GCA_001499755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/755/GCA_001499755.1_PierC1	-	-
Enterococcus faecium P1139	1134830	PRJNA82049	82049	Terrabacteria group	Firmicutes	2.98607	37.6	-	AMAN01	271	3105	2909	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299505	GCA_000295035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/035/GCA_000295035.2_ASM29503v2	-	P1139
Neisseria gonorrhoeae ATL_2011_05-08	1351786	PRJNA209499	209499	Proteobacteria	Betaproteobacteria	2.13669	52.4	-	ATQK01	314	2492	2169	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02338812	GCA_001026305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/305/GCA_001026305.1_ASM102630v1	-	ATL_2011_05-08
Streptococcus mutans TCI-278	1074180	PRJNA72099	72099	Terrabacteria group	Firmicutes	1.85634	36.9	-	AGMG01	98	1866	1753	10/6/11	3/22/17	Contig	JCVI	SAMN02436358	GCA_000229825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/825/GCA_000229825.2_SMUT7-NEX_9-278	-	TCI-278
Enterococcus faecalis CH188	565644	PRJNA32951	32951	Terrabacteria group	Firmicutes	3.22035	37.3	-	ACAV01	27	3273	3133	5/20/09	3/22/17	Scaffold	Broad Institute	SAMN02595266	GCA_000157495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/495/GCA_000157495.1_ASM15749v1	-	CH188
Clostridium botulinum B2 331	1379273	PRJNA213567	213567	Terrabacteria group	Firmicutes	3.8091	28	-	AUYV01	10	3658	3460	6/24/14	3/24/17	Contig	Army Medical and Veterinary Research Center	SAMN02869845	GCA_000710975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/975/GCA_000710975.1_B2_331	26341861	B2 331
Liberibacter crescens BT-1	1215343	PRJNA171392	171392	Proteobacteria	Alphaproteobacteria	1.50466	35.4	chromosome:NC_019907.1/CP003789.1	-	1	1363	1245	12/19/12	4/17/17	Complete Genome	University of Florida	SAMN02604174	GCA_000325745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/745/GCA_000325745.1_ASM32574v1	23408754	BT-1
Caldisericum exile AZM16c01	511051	PRJNA41615	41615	Caldiserica	Caldisericia	1.5581	35.4	chromosome:NC_017096.1/AP012051.1	-	1	1570	1496	3/29/12	4/17/17	Complete Genome	National Institute of Technology and Evaluation	SAMD00061110	GCA_000284335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/335/GCA_000284335.1_ASM28433v1	-	AZM16c01
Vibrio parahaemolyticus	670	PRJNA288141	288141	Proteobacteria	Gammaproteobacteria	5.36816	45.1	-	LFYM01	94	5174	4927	8/21/15	3/18/17	Scaffold	Health Canada	SAMN03799830	GCA_001273575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/575/GCA_001273575.1_ASM127357v1	-	ISF-29-3
Streptococcus mitis 18/56	1340485	PRJNA206049	206049	Terrabacteria group	Firmicutes	1.92309	40.2	-	ATAA01	86	1820	1611	7/16/13	1/8/14	Contig	"Research Institute of Physical-Chemical Medicine, Moscow, Russia"	SAMN02470843	GCA_000430345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/345/GCA_000430345.1_Smit.str18_56_v1.0	-	18/56
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.89152	38.1	-	MLKU01	179	1950	1709	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297008	GCA_001867475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/475/GCA_001867475.1_ASM186747v1	27118061	AWRIB1118
Xanthomonas oryzae pv. oryzae	64187	PRJNA269429	269429	Proteobacteria	Gammaproteobacteria	4.29773	63.9	-	JXEZ01	448	4245	3416	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252524	GCA_001927855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/855/GCA_001927855.1_ASM192785v1	-	DXO-174
Campylobacter fetus subsp. fetus	32019	PRJEB8721	292173	Proteobacteria	delta/epsilon subdivisions	1.83733	33.8	-	FAUW01	13	1969	1853	11/29/15	4/4/17	Scaffold	SC	SAMEA3403189	GCA_001487005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/005/GCA_001487005.1_17059_2_1	-	006A-0191
Xanthomonas citri subsp. citri	611301	PRJEB7148	306105	Proteobacteria	Gammaproteobacteria	5.2251	64.7	-	CCWY01	41	4919	4846	12/16/15	12/16/15	Scaffold	Genoscope CEA	SAMEA2752226	GCA_001495935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/935/GCA_001495935.1_ASX_K_PRJEB7148_v1	-	-
Brucella abortus 65/157	1160200	PRJNA173622	173622	Proteobacteria	Alphaproteobacteria	3.27895	57.2	-	AQJB01	6	3367	3138	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00811236	GCA_000370125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/125/GCA_000370125.1_Bruc_abor_65_157_V1	-	65/157
Francisella tularensis subsp. tularensis 831	1210521	PRJNA170751	170751	Proteobacteria	Gammaproteobacteria	1.81309	32.3	-	AMPV01	46	1898	1594	10/16/12	3/30/17	Contig	Dugway Proving Ground	SAMN02469748	GCA_000305895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/895/GCA_000305895.1_ASM30589v1	-	831
Shigella boydii	621	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.00318	50.5	-	JWBP01	294	5267	4948	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03197097	GCA_001061115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/115/GCA_001061115.1_ASM106111v1	26230489	1141_SBOY
Clostridioides difficile 6503	691160	PRJNA41651	41651	Terrabacteria group	Firmicutes	4.08239	28.2	-	ADEI01	150	3789	3463	12/29/10	4/21/17	Contig	Cornell University	SAMN00006222	GCA_000193695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/695/GCA_000193695.2_ASM19369v2	-	6503
Vibrio cholerae HC-22A1	991954	PRJNA63915	63915	Proteobacteria	Gammaproteobacteria	4.03403	47.5	-	AGUL01	86	3841	3689	11/4/11	3/22/17	Scaffold	Institute for Genome Sciences	SAMN00262257	GCA_000234925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/925/GCA_000234925.1_ASM23492v1	-	HC-22A1
Ralstonia solanacearum	305	PRJNA381968	381968	Proteobacteria	Betaproteobacteria	4.79355	66.5	-	NCTJ01	39	4355	2581	8/14/17	8/14/17	Contig	University of Wisconsin-Madison	SAMN06697628	GCA_002251605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/605/GCA_002251605.1_ASM225160v1	-	UW700
Bacillus thuringiensis serovar aizawai str. Hu4-2	1238885	PRJNA175233	175233	Terrabacteria group	Firmicutes	6.45591	34.7	-	AMXT02	390	6974	6447	9/19/13	4/4/17	Contig	Universidad Publica de Navarra	SAMN02471369	GCA_000468995.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/995/GCA_000468995.3_Hu4-2_second_version	24784323	Hu4-2
Burkholderia mallei	13373	PRJNA336109	336109	Proteobacteria	Betaproteobacteria	5.54352	68.7	-	MDJV01	215	5851	5458	8/29/16	4/5/17	Scaffold	ICAR-National Research Centre on Equines	SAMN05504013	GCA_001715185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/185/GCA_001715185.1_ASM171518v1	-	3712
Bacillus cereus F837/76	347495	PRJNA15716	15716	Terrabacteria group	Firmicutes	5.2885	35.4	chromosome:NC_016779.1/CP003187.1; plasmid pF837_10:NC_016780.1/CP003189.1; plasmid pF837_55:NC_016794.1/CP003188.1	-	3	5691	5316	12/21/11	5/18/17	Complete Genome	Genoscope	SAMN02603249	GCA_000239195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/195/GCA_000239195.1_ASM23919v1	22374959	F837/76
Filifactor alocis ATCC 35896	546269	PRJNA30485	30485	Terrabacteria group	Firmicutes	1.93101	35.4	chromosome:NC_016630.1/CP002390.1	-	1	1747	1662	1/27/11	4/17/17	Complete Genome	Broad Institute	SAMN02463683	GCA_000163895.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/895/GCA_000163895.2_ASM16389v2	-	ATCC 35896
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.16698	67.1	-	MUQO01	181	7738	7303	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001824	GCA_001991515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/515/GCA_001991515.1_ASM199151v1	-	VC6904
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.19789	38.3	-	NGPH01	107	2170	1999	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848397	GCA_002253765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/765/GCA_002253765.1_ASM225376v1	-	117w
Bacteroides fragilis str. S24L15	1339323	PRJNA206166	206166	FCB group	Bacteroidetes/Chlorobi group	5.23926	43.2	-	JGEM01	147	4679	4362	3/20/14	4/18/17	Contig	IGS	SAMN02314564	GCA_000599005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/005/GCA_000599005.1_ASM59900v1	-	S24L15
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.58381	50.7	-	CXIC01	356	5105	4385	7/16/15	2/24/17	Contig	SC	SAMEA2003380	GCA_001260595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/595/GCA_001260595.1_8289_7_63	-	82896
Caldicellulosiruptor owensensis OL	632518	PRJNA40833	40833	Terrabacteria group	Firmicutes	2.4289	35.4	chromosome:NC_014657.1/CP002216.1	-	1	2312	2131	11/10/10	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713561	GCA_000166335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/335/GCA_000166335.1_ASM16633v1	21216991	OL
Bacillus licheniformis	1402	PRJNA296449	296449	Terrabacteria group	Firmicutes	4.20647	46.2	-	LKPQ01	18	4398	4202	12/30/16	4/6/17	Scaffold	TIFN	SAMN04127603	GCA_001925055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/925/055/GCA_001925055.1_ASM192505v1	27994575	B4124
Vibrio vulnificus	672	PRJNA355116	355116	Proteobacteria	Gammaproteobacteria	5.11197	46.6	-	NOIY01	240	4903	4597	8/30/17	9/1/17	Contig	FDA	SAMN06140070	GCA_002278455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/455/GCA_002278455.1_ASM227845v1	-	WAPHLVBRA00010
Pseudomonas syringae pv. actinidiae ICMP 18807	1194404	PRJNA178798	178798	Proteobacteria	Gammaproteobacteria	6.12582	58.8	-	ANJL01	148	5784	5345	3/5/13	5/19/17	Contig	University of Otago	SAMN02471920	GCA_000344535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/535/GCA_000344535.1_ICMP18807v1.0	23555547	ICMP 18807
Streptococcus suis 93A	1214162	PRJNA171438	171438	Terrabacteria group	Firmicutes	2.3269	41.1	-	ALLQ01	168	2340	2111	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469562	GCA_000440755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/755/GCA_000440755.1_version1	-	93A
Streptococcus agalactiae	1311	PRJNA254651	254651	Terrabacteria group	Firmicutes	2.0896	35.2	-	LRQK01	39	2130	2054	2/2/16	3/19/17	Scaffold	The Genome Institute at Washington University	SAMN03948582	GCA_001546675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/675/GCA_001546675.1_ASM154667v1	-	PSS_7568
Sulfolobus islandicus Y.G.57.14	439386	PRJNA19487	19487	TACK group	Crenarchaeota	2.70206	35.4	chromosome:NC_012622.1/CP001403.1	-	1	2984	2710	4/29/09	3/30/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598422	GCA_000022465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/465/GCA_000022465.1_ASM2246v1	19435847	Y.G.57.14
Bacillus anthracis str. Sterne	260799	PRJNA10878	10878	Terrabacteria group	Firmicutes	5.22866	35.4	chromosome:NC_005945.1/AE017225.1	-	1	5263	4952	6/24/04	8/3/16	Complete Genome	DOE Joint Genome Institute	SAMN02598266	GCA_000008165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/165/GCA_000008165.1_ASM816v1	-	Sterne
Bifidobacterium longum subsp. infantis	1682	PRJNA379831	379831	Terrabacteria group	Actinobacteria	2.57973	59.4	-	NAQJ01	26	2332	2038	3/31/17	4/10/17	Contig	University of Parma	SAMN06621708	GCA_002076025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/025/GCA_002076025.1_Bbif1888B	-	1888B
Shigella flexneri	623	PRJNA315925	315925	Proteobacteria	Gammaproteobacteria	4.85384	50.5	-	LVIQ01	488	5629	4520	5/20/16	8/8/17	Contig	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04570184	GCA_001649025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/025/GCA_001649025.1_ASM164902v1	-	HN4s02
Bacillus anthracis str. A0488	486624	PRJNA27913	27913	Terrabacteria group	Firmicutes	5.39217	35.2	-	ABJC01	63	6024	5594	1/15/08	5/18/17	Scaffold	Los Alamos National Laboratory	SAMN02470254	GCA_000181835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/181/835/GCA_000181835.1_ASM18183v1	-	A0488
Pseudomonas putida	303	PRJEB15108	347745	Proteobacteria	Gammaproteobacteria	6.06823	61.7	-	FMHQ01	21	5659	5463	10/10/16	6/27/17	Contig	OAK RIDGE NATIONAL LABORATORY	SAMEA4383250	GCA_900095365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/365/GCA_900095365.1_ASM90009536v1	-	-
Leptospira interrogans serovar Canicola str. P2655	1291307	PRJNA188981	188981	Spirochaetes	Spirochaetia	4.60691	35	-	AOWJ01	178	4202	3739	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01919808	GCA_000342645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/645/GCA_000342645.1_CA_glsol063	-	P2655
Streptococcus pyogenes HLJGAS12011	1214224	PRJNA171209	171209	Terrabacteria group	Firmicutes	1.8961	38.3	-	ALKE01	30	1915	1818	8/14/12	3/23/17	Scaffold	"State Key Laboratory for Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, People’s Republic of China"	SAMN02469372	GCA_000290595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/595/GCA_000290595.1_ASM29059v1	23045496	HLJGAS12011
Bacillus anthracis str. Ames	198094	PRJNA309	309	Terrabacteria group	Firmicutes	5.22729	35.4	chromosome:NC_003997.3/AE016879.1	-	1	5636	5326	5/16/02	8/3/16	Complete Genome	J. Craig Venter Institute	SAMN02603432	GCA_000007845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/845/GCA_000007845.1_ASM784v1	12721629	Ames
Bacillus thuringiensis	1428	PRJNA290307	290307	Terrabacteria group	Firmicutes	6.75249	35.3991	chromosome:NZ_CP015350.1/CP015350.1; plasmid p101287:NZ_CP015356.1/CP015356.1; plasmid p109822:NZ_CP015355.1/CP015355.1; plasmid p120416:NZ_CP015354.1/CP015354.1; plasmid p120510:NZ_CP015353.1/CP015353.1; plasmid p142098:NZ_CP015352.1/CP015352.1; plasmid p14456:NZ_CP015360.1/CP015360.1; plasmid p150790:NZ_CP015351.1/CP015351.1; plasmid p17175:NZ_CP015359.1/CP015359.1; plasmid p46701:NZ_CP015358.1/CP015358.1; plasmid p55166:NZ_CP015357.1/CP015357.1; plasmid p6330:NZ_CP015361.1/CP015361.1	-	12	7248	6445	7/15/16	8/8/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03890259	GCA_001685565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/565/GCA_001685565.1_ASM168556v1	-	MYBT18246
Streptococcus pneumoniae PNI0159	1159095	PRJNA89193	89193	Terrabacteria group	Firmicutes	2.03408	39.8	-	AJUX01	112	2180	1992	4/8/13	3/2/17	Scaffold	Washington University	SAMN02436798	GCA_000355965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/965/GCA_000355965.1_ASM35596v1	-	PNI0159
Bacillus thuringiensis	1428	PRJNA302721	302721	Terrabacteria group	Firmicutes	5.35293	35.3976	chromosome:NZ_CP013274.1/CP013274.1; plasmid unnamed:NZ_CP013273.1/CP013273.1	-	2	5569	5306	12/2/15	1/27/16	Complete Genome	HZAU	SAMN04278951	GCA_001455345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/345/GCA_001455345.1_ASM145534v1	-	CTC
Lactococcus lactis subsp. lactis KLDS 4.0325	1399116	PRJNA218564	218564	Terrabacteria group	Firmicutes	2.59549	35.3892	chromosome:NC_022593.1/CP006766.1; plasmid 1:NC_022587.1/CP006767.1; plasmid 2:NZ_CP007042.1/CP007042.1; plasmid 3:NZ_CP007043.1/CP007043.1	-	4	2680	2453	10/24/13	4/2/17	Complete Genome	"key lab of dairy science, ministry of education, northeast agriculture university"	SAMN02603468	GCA_000479375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/375/GCA_000479375.2_ASM47937v2	24285665	KLDS 4.0325
Haemophilus influenzae	727	PRJNA288974	288974	Proteobacteria	Gammaproteobacteria	1.9519	38.2	-	LHSM01	54	2012	1871	9/24/15	3/26/17	Contig	University of Oklahoma Health Sciences Center	SAMN03840566	GCA_001298185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/185/GCA_001298185.1_ASM129818v1	26607889	HI1413
Mycobacterium bovis BCG	33892	PRJEB8560	294541	Terrabacteria group	Actinobacteria	4.2942	65.6	-	CUWH01	1	4190	3975	9/1/15	4/4/17	Scaffold	KAUST	SAMEA3257666	GCA_001287125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/125/GCA_001287125.1_bcg_Copenhagen	-	Danish
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.34901	69	-	LMVR01	243	5111	4806	4/4/16	4/5/17	Contig	Robert Koch Institute	SAMN04229400	GCA_001610235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/235/GCA_001610235.1_ASM161023v1	-	MAH-E-88-1
Lactococcus lactis subsp. lactis	1360	PRJNA294255	294255	Terrabacteria group	Firmicutes	2.44589	34.8	-	LKLL01	38	2415	2289	12/4/15	4/4/17	Contig	Radboudumc	SAMN04026624	GCA_001456595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/595/GCA_001456595.1_ASM145659v1	-	KF196
Bacillus cereus Rock1-15	526982	PRJNA29675	29675	Terrabacteria group	Firmicutes	5.76628	34.9	chromosome:NZ_CM000729.1/CM000729.1	ACMH01	1	12044	11605	4/30/09	5/18/17	Chromosome	Naval Medical Research Center	SAMN00727711	GCA_000161175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/175/GCA_000161175.1_ASM16117v1	22645259	Rock1-15
Staphylococcus epidermidis NIHLM061	979204	PRJNA62355	62355	Terrabacteria group	Firmicutes	2.58609	32	-	AKGN01	61	2548	2386	7/9/12	3/23/17	Contig	NISC - NIH Intramural Sequencing Center	SAMN00993260	GCA_000276445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/445/GCA_000276445.1_ASM27644v1	-	NIHLM061
Bacillus sp. ABP14	1892404	PRJNA339780	339780	Terrabacteria group	Firmicutes	5.15257	35.3891	chromosome:NZ_CP017016.1/CP017016.1; plasmid pABP14:NZ_CP017017.1/CP017017.1	-	2	5557	5202	10/24/16	4/13/17	Complete Genome	GENOPAR consortium	SAMN05607843	GCA_001831375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/375/GCA_001831375.1_ASM183137v1	-	ABP14
Yersinia pestis subsp. microtus bv. Caucasica	385966	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.56177	47.6	-	LIYU01	180	4309	3955	9/21/15	3/26/17	Scaffold	SRCAMB	SAMN03839880	GCA_001295045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/045/GCA_001295045.1_ASM129504v1	26634751	SCPM-O-B-6990
Pseudomonas fluorescens	294	PRJNA283456	283456	Proteobacteria	Gammaproteobacteria	7.2569	62.9	-	LCZB01	137	6664	6425	6/5/15	4/3/17	Contig	"University of Michigan, Ann Arbor"	SAMN03650320	GCA_001020715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/715/GCA_001020715.1_ASM102071v1	26227600	AU11706
Bacillus mycoides	1405	PRJNA238211	238211	Terrabacteria group	Firmicutes	5.63705	35.3849	chromosome:NZ_CP009692.1/CP009692.1; plasmid pBMX_1:NZ_CP009691.1/CP009691.1; plasmid pBMX_2:NZ_CP009690.1/CP009690.1; plasmid pBMX_3:NZ_CP009689.1/CP009689.1	-	4	5903	5490	2/5/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03012838	GCA_000832605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/605/GCA_000832605.1_ASM83260v1	25931591	ATCC 6462
Bacillus thuringiensis serovar finitimus YBT-020	930170	PRJNA60447	60447	Terrabacteria group	Firmicutes	5.68238	35.3815	chromosome:NC_017200.1/CP002508.1; plasmid pBMB26:NC_017201.1/CP002509.1; plasmid pBMB28:NC_017199.1/CP002510.1	-	3	6089	5693	2/28/11	6/15/17	Complete Genome	Huazhong Agricultural University	SAMN02603317	GCA_000190515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/515/GCA_000190515.1_ASM19051v1	21398543	YBT-020
Bacillus cereus ATCC 4342	526977	PRJNA243585	243585	Terrabacteria group	Firmicutes	5.3063	35.3674	chromosome:NZ_CP009628.1/CP009628.1; plasmid pBGM:NZ_CP009627.1/CP009627.1	-	2	5697	5326	2/5/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03107142	GCA_000832845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/845/GCA_000832845.1_ASM83284v1	25931591	ATCC 4342
Lactobacillus sp. WiKim39	1847728	PRJNA320457	320457	Terrabacteria group	Firmicutes	2.53418	35.363	chromosome:NZ_CP019323.1/CP019323.1; plasmid pWIKIM01:NZ_CP019324.1/CP019324.1	-	2	2530	2431	1/26/17	4/17/17	Complete Genome	world institute of kimchi	SAMN04939523	GCA_001971585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/585/GCA_001971585.1_ASM197158v1	-	WiKim39
Bacillus thuringiensis	1428	PRJNA238236	238236	Terrabacteria group	Firmicutes	5.31269	35.3595	chromosome:NZ_CP010088.1/CP010088.1; plasmid unnamed:NZ_CP010087.1/CP010087.1	-	2	5795	5461	2/5/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03223175	GCA_000833085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/085/GCA_000833085.1_ASM83308v1	25931591	97-27
[Bacillus thuringiensis] serovar konkukian str. 97-27	281309	PRJNA10877	10877	Terrabacteria group	Firmicutes	5.31479	35.3594	chromosome:NC_005957.1/AE017355.1; plasmid pBT9727:NC_006578.1/CP000047.1	-	2	5343	5197	6/28/04	8/3/16	Complete Genome	DOE Joint Genome Institute	SAMN02598265	GCA_000008505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/505/GCA_000008505.1_ASM850v1	16621833	97-27
Pseudomonas fluorescens	294	PRJNA283443	283443	Proteobacteria	Gammaproteobacteria	5.4093	58.3	-	LCYS01	93	5057	4814	6/5/15	4/3/17	Contig	"University of Michigan, Ann Arbor"	SAMN03650285	GCA_001020765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/765/GCA_001020765.1_ASM102076v1	-	AU2390
Yersinia pestis subsp. microtus bv. Caucasica	385966	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.55475	47.6	-	LIYY01	228	4315	3952	9/21/15	3/26/17	Scaffold	SRCAMB	SAMN03861483	GCA_001295105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/105/GCA_001295105.1_ASM129510v1	26634751	SCPM-O-B-6757
Bacillus anthracis	1392	PRJNA243523	243523	Terrabacteria group	Firmicutes	5.33174	35.3573	chromosome:NZ_CP007618.1/CP007618.1; plasmid unnamed:NZ_CP007617.1/CP007617.1	-	2	5902	5528	8/21/14	3/24/17	Complete Genome	Los Alamos National Laboratory	SAMN02736984	GCA_000742655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/655/GCA_000742655.1_ASM74265v1	25301645	2000031021
Staphylococcus epidermidis NIHLM067	979203	PRJNA62353	62353	Terrabacteria group	Firmicutes	2.39904	32.1	-	AKGM01	51	2404	2214	7/9/12	3/23/17	Contig	NISC - NIH Intramural Sequencing Center	SAMN00993237	GCA_000276465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/465/GCA_000276465.1_ASM27646v1	-	NIHLM067
Bacillus cereus Rock3-29	526984	PRJNA29679	29679	Terrabacteria group	Firmicutes	5.87811	34.9	chromosome:NZ_CM000731.1/CM000731.1	ACMJ01	1	12197	11735	4/30/09	6/15/17	Chromosome	Naval Medical Research Center	SAMN00727649	GCA_000161215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/215/GCA_000161215.1_ASM16121v1	22645259	Rock3-29
Lactococcus lactis subsp. lactis	1360	PRJNA294255	294255	Terrabacteria group	Firmicutes	2.65125	34.8	-	LKLN01	98	2621	2473	12/4/15	4/4/17	Contig	Radboudumc	SAMN04026627	GCA_001456615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/615/GCA_001456615.1_ASM145661v1	-	KF282
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.09063	69.2	-	LMVS01	198	4823	4573	4/4/16	4/5/17	Contig	Robert Koch Institute	SAMN04229401	GCA_001610245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/245/GCA_001610245.1_ASM161024v1	-	MAH-E-89-1
Mycobacterium bovis BCG	33892	PRJEB8560	294541	Terrabacteria group	Actinobacteria	4.27919	65.6	-	CUWL01	1	4167	3965	9/1/15	4/4/17	Scaffold	KAUST	SAMEA3257671	GCA_001287165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/165/GCA_001287165.1_bcg_Pasteur	-	Pasteur
Haemophilus influenzae	727	PRJNA288993	288993	Proteobacteria	Gammaproteobacteria	1.79881	37.9	-	LHSO01	45	1754	1618	9/24/15	3/26/17	Contig	University of Oklahoma Health Sciences Center	SAMN03840618	GCA_001298195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/195/GCA_001298195.1_ASM129819v1	-	HI2428
Mycobacterium tuberculosis UT205	1097669	PRJEA74573	74573	Terrabacteria group	Actinobacteria	4.41809	64.9	chromosome I:NC_016934.1/HE608151.1	-	1	4246	3977	2/24/12	5/19/17	Chromosome	"CNSG, CCITB"	SAMEA2272432	GCA_000304555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/555/GCA_000304555.1_Mt_UT205	22404577	UT205
Bacillus anthracis	1392	PRJNA238046	238046	Terrabacteria group	Firmicutes	5.2948	35.3571	chromosome:NZ_CP009476.1/CP009476.1; plasmid pXO2:NZ_CP009475.1/CP009475.1	-	2	5922	5521	2/5/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03024436	GCA_000832585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/585/GCA_000832585.1_ASM83258v1	25931591	Pasteur
Streptococcus pneumoniae PNI0197	1159097	PRJNA89197	89197	Terrabacteria group	Firmicutes	1.98983	39.8	-	AJUW01	118	2144	1964	4/8/13	3/9/17	Scaffold	Washington University	SAMN02436862	GCA_000355985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/985/GCA_000355985.1_ASM35598v1	-	PNI0197
Lactococcus lactis subsp. lactis	1360	PRJNA320696	320696	Terrabacteria group	Firmicutes	2.75389	35.3538	chromosome:NZ_CP015897.1/CP015897.1; plasmid p275A:NZ_CP016699.1/CP016699.1; plasmid p275B:NZ_CP016700.1/CP016700.1; plasmid p275C:NZ_CP016701.1/CP016701.1; plasmid p275D:NZ_CP016702.1/CP016702.1	-	5	2836	2613	4/4/17	4/5/17	Complete Genome	University College Cork	SAMN04955252	GCA_002078435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/435/GCA_002078435.1_ASM207843v1	28356072	275
Bacillus cereus	1396	PRJNA335430	335430	Terrabacteria group	Firmicutes	5.32417	35.3467	chromosome:NZ_CP018935.1/CP018935.1; plasmid unnamed1:NZ_CP018936.1/CP018936.1	-	2	5777	5441	1/10/17	3/28/17	Complete Genome	NBACC	SAMN05442529	GCA_001941925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/925/GCA_001941925.1_ASM194192v1	-	JEM-2
Streptococcus pyogenes ABC020060793	1439300	PRJNA233301	233301	Terrabacteria group	Firmicutes	1.87509	38.6	-	JJFA01	8	1946	1805	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567650	GCA_000629625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/625/GCA_000629625.1_Stre_pyog_ABC020060793_V1	-	ABC020060793
Leptospira interrogans serovar Copenhageni str. Fiocruz LV4113	1291326	PRJNA188990	188990	Spirochaetes	Spirochaetia	4.62085	35	-	AOWA01	133	4152	3783	3/1/13	6/20/17	Contig	J. Craig Venter Institute	SAMN01920633	GCA_000342665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/665/GCA_000342665.1_CA_glsol095	-	Fiocruz LV4113
Pseudomonas putida LF54	1299319	PRJNA190835	190835	Proteobacteria	Gammaproteobacteria	5.62502	61.4	-	AOUR02	180	5296	5032	5/8/13	4/2/17	Scaffold	University of Tsukuba	SAMN02221896	GCA_000390005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/005/GCA_000390005.2_ASM39000v2	23603683	LF54
Bacillus anthracis str. A0193	486619	PRJNA27923	27923	Terrabacteria group	Firmicutes	5.39288	35.1	-	ABKF01	60	6020	5611	2/8/08	5/18/17	Scaffold	Los Alamos National Laboratory	SAMN02470282	GCA_000181915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/181/915/GCA_000181915.1_ASM18191v1	-	A0193
Shigella flexneri	623	PRJNA315925	315925	Proteobacteria	Gammaproteobacteria	4.79247	50.5	-	LVIR01	482	5554	4406	5/20/16	8/11/17	Contig	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04570185	GCA_001649035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/035/GCA_001649035.1_ASM164903v1	-	HN4s03
Bifidobacterium longum	216816	PRJNA379831	379831	Terrabacteria group	Actinobacteria	2.47375	60.2	-	NAQL01	47	2292	2075	3/31/17	4/6/17	Contig	University of Parma	SAMN06621706	GCA_002076095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/095/GCA_002076095.1_Bbif1886B	-	1886B
Bacillus sp. FDAARGOS_235	1839798	PRJNA231221	231221	Terrabacteria group	Firmicutes	5.60814	35.3186	chromosome:NZ_CP020437.1/CP020437.1; plasmid 1:NZ_CP020434.1/CP020434.1; plasmid 2:NZ_CP020436.1/CP020436.1; plasmid 3:NZ_CP020435.1/CP020435.1	-	4	5952	5498	3/29/17	4/1/17	Complete Genome	US Food and Drug Administration 	SAMN04875572	GCA_002073415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/415/GCA_002073415.1_ASM207341v1	-	FDAARGOS_235
Bacillus cereus D17	1454382	PRJNA236486	236486	Terrabacteria group	Firmicutes	5.59036	35.3171	chromosome:NZ_CP009300.1/CP009300.1; plasmid unnamed:NZ_CP009299.1/CP009299.1	-	2	6085	5715	2/5/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03010435	GCA_000832385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/385/GCA_000832385.1_ASM83238v1	25931591	D17
Streptococcus agalactiae	1311	PRJNA254648	254648	Terrabacteria group	Firmicutes	2.06828	35.1	-	LRQL01	36	2096	2015	2/2/16	3/19/17	Scaffold	The Genome Institute at Washington University	SAMN03948583	GCA_001546685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/685/GCA_001546685.1_ASM154668v1	-	PSS_7625
Streptococcus suis NT77	1214163	PRJNA171439	171439	Terrabacteria group	Firmicutes	2.31631	41	-	ALLR01	146	2309	2108	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469538	GCA_000440775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/775/GCA_000440775.1_version1	-	NT77
Pseudomonas syringae pv. actinidiae ICMP 19439	1250998	PRJNA179101	179101	Proteobacteria	Gammaproteobacteria	6.216	58.5	-	ANJM01	477	5987	5472	3/5/13	5/19/17	Contig	University of Otago	SAMN02471918	GCA_000344555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/555/GCA_000344555.1_ICMP19439PSA1.0	23555547	ICMP 19439
Vibrio vulnificus	672	PRJNA355116	355116	Proteobacteria	Gammaproteobacteria	4.90843	46.6	-	NPFI01	128	4634	4378	8/30/17	9/1/17	Contig	FDA	SAMN06062374	GCA_002278495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/495/GCA_002278495.1_ASM227849v1	-	WAPHLVBRA00001
Bacillus licheniformis	1402	PRJNA296449	296449	Terrabacteria group	Firmicutes	4.36585	45.8	-	LKPR01	16	4417	4207	12/30/16	4/6/17	Scaffold	TIFN	SAMN04127604	GCA_001925105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/925/105/GCA_001925105.1_ASM192510v1	27994575	B4125
Sulfolobus islandicus Y.N.15.51	419942	PRJNA18651	18651	TACK group	Crenarchaeota	2.85441	35.3118	chromosome:NC_012623.1/CP001404.1; plasmid pYN01:NC_012624.1/CP001405.1	-	2	3156	2826	4/29/09	3/30/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598411	GCA_000022485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/485/GCA_000022485.1_ASM2248v1	19435847	Y.N.15.51
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.62842	50.7	-	CXNK01	388	5224	4432	7/16/15	2/24/17	Contig	SC	SAMEA2057216	GCA_001260875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/875/GCA_001260875.1_9870_6_8	-	143105
Bacteroides fragilis str. S36L5	1339326	PRJNA206169	206169	FCB group	Bacteroidetes/Chlorobi group	5.74361	43.6	-	JGEQ01	105	5357	5001	3/20/14	4/2/17	Contig	IGS	SAMN02315065	GCA_000599025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/025/GCA_000599025.1_ASM59902v1	-	S36L5
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.19113	38.3	-	NGPI01	106	2165	2002	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848396	GCA_002253785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/785/GCA_002253785.1_ASM225378v1	-	117r
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.33813	67	-	MUQP01	181	7931	7479	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001825	GCA_001991535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/535/GCA_001991535.1_ASM199153v1	-	VC6903
Bacillus cereus	1396	PRJNA301081	301081	Terrabacteria group	Firmicutes	5.37329	35.3101	chromosome:NZ_CP014486.1/CP014486.1; plasmid unnamed:NZ_CP014487.1/CP014487.1	-	2	5732	5366	2/15/17	3/29/17	Complete Genome	Hallym University	SAMN04233293	GCA_002000005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/005/GCA_002000005.1_ASM200000v1	27728961	FORC021
Bacillus cereus AH820	405535	PRJNA17711	17711	Terrabacteria group	Firmicutes	5.58883	35.3086	chromosome:NC_011773.1/CP001283.1; plasmid pAH820_10:NC_011771.1/CP001286.1; plasmid pAH820_272:NC_011777.1/CP001285.1; plasmid pAH820_3:NC_011776.1/CP001284.1	-	4	6107	5765	12/19/08	5/18/17	Complete Genome	TIGR	SAMN02604057	GCA_000021785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/785/GCA_000021785.1_ASM2178v1	-	AH820
Burkholderia mallei	13373	PRJEB20536	386140	Proteobacteria	Betaproteobacteria	5.68713	68.6	-	FXLG01	72	6117	5544	5/10/17	5/24/17	Scaffold	ANSES	SAMEA104016670	GCA_900180415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/415/GCA_900180415.1_16-2438_BM_8_v1	-	-
Bacillus thuringiensis JM-Mgvxx-63	1423139	PRJNA227447	227447	Terrabacteria group	Firmicutes	4.9318	35	-	AYSM01	33	5233	4879	12/3/13	4/2/17	Contig	University of Sao Paulo - Escola Superior de Agricultura Luiz de Queiroz	SAMN02402225	GCA_000503755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/755/GCA_000503755.1_Bcereus	24482524	JM-Mgvxx-63
Ralstonia solanacearum	305	PRJNA381968	381968	Proteobacteria	Betaproteobacteria	5.47898	66.6	-	NCTI01	2	4842	4566	8/14/17	8/16/17	Contig	University of Wisconsin-Madison	SAMN06697629	GCA_002251655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/655/GCA_002251655.1_ASM225165v1	-	UW551
Vibrio cholerae HC-21A1	991953	PRJNA63913	63913	Proteobacteria	Gammaproteobacteria	4.03043	47.5	-	AGUK01	96	3841	3676	11/4/11	3/22/17	Scaffold	Institute for Genome Sciences	SAMN00262263	GCA_000234945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/945/GCA_000234945.1_ASM23494v1	-	HC-21A1
Clostridioides difficile CD37	1125976	PRJNA78805	78805	Terrabacteria group	Firmicutes	4.01023	28.6	-	AHJJ01	245	3700	3569	1/11/12	3/15/17	Contig	UCL Eastman Dental Institute	SAMN02471299	GCA_000242355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/355/GCA_000242355.2_ASM24235v2	22461557	CD37
Shigella boydii	621	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.78866	50.7	-	JVYF01	548	5107	4693	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03197185	GCA_001061275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/275/GCA_001061275.1_ASM106127v1	26230489	1220_SBOY
Francisella tularensis subsp. tularensis AS_713	1210522	PRJNA170752	170752	Proteobacteria	Gammaproteobacteria	1.81549	32.3	-	AMPU01	46	1897	1584	10/16/12	3/30/17	Contig	Dugway Proving Ground	SAMN02469754	GCA_000305915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/915/GCA_000305915.1_ASM30591v1	-	AS_713
Brucella abortus 65/63	1169211	PRJNA173509	173509	Proteobacteria	Alphaproteobacteria	3.29379	57.2	-	AQJC01	7	3389	3156	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00839706	GCA_000370145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/145/GCA_000370145.1_Bruc_abor_65_63_V1	-	65/63
Xanthomonas citri subsp. citri	611301	PRJEB7156	306113	Proteobacteria	Gammaproteobacteria	5.25856	64.7	-	CCWH01	88	4979	4905	12/16/15	12/16/15	Scaffold	Genoscope CEA	SAMEA2752263	GCA_001496535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/535/GCA_001496535.1_ASX_M_PRJEB7156_v1	-	-
Campylobacter fetus subsp. fetus	32019	PRJEB8721	292173	Proteobacteria	delta/epsilon subdivisions	2.00026	33.9	-	FAVB01	29	2162	2049	11/29/15	4/5/17	Scaffold	SC	SAMEA3310288	GCA_001487085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/085/GCA_001487085.1_17150_1_75	-	006A-0059
Xanthomonas oryzae pv. oryzae	64187	PRJNA269432	269432	Proteobacteria	Gammaproteobacteria	4.25791	63.9	-	JXFC01	392	4247	3434	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252536	GCA_001927865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/865/GCA_001927865.1_ASM192786v1	-	DXO-203
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.86104	38	-	MLKV01	175	1906	1679	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297009	GCA_001867485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/485/GCA_001867485.1_ASM186748v1	27118061	AWRIB1119
Streptococcus mitis 29/42	1340486	PRJNA206050	206050	Terrabacteria group	Firmicutes	1.94377	40.2	-	ATAB01	43	1841	1626	7/16/13	1/8/14	Contig	"Research Institute of Physical-Chemical Medicine, Moscow, Russia"	SAMN02470852	GCA_000430365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/365/GCA_000430365.1_Smit.str29_42_v1.0	-	29/42
Vibrio parahaemolyticus	670	PRJNA288141	288141	Proteobacteria	Gammaproteobacteria	5.04136	45.4	-	LIRR01	74	4867	4598	9/9/15	3/26/17	Scaffold	Health Canada	SAMN03799834	GCA_001280635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/635/GCA_001280635.1_ASM128063v1	-	ISF-54-12
Bacillus subtilis	1423	PRJNA262507	262507	Terrabacteria group	Firmicutes	3.94145	46.5	chromosome:NZ_CP009684.1/CP009684.1	-	1	3891	3681	10/28/14	3/24/17	Chromosome	Ludwig-Maximilians-Universitaet Muenchen	SAMN03083512	GCA_000769515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/515/GCA_000769515.1_ASM76951v1	25502661	B-1
Bacillus cereus ATCC 14579	226900	PRJNA384	384	Terrabacteria group	Firmicutes	5.42708	35.3076	chromosome:NC_004722.1/AE016877.1; plasmid pBClin15:NC_004721.2/AE016878.2	-	2	5494	5231	4/16/03	8/28/16	Complete Genome	INRA	SAMN02603340	GCA_000007825.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/825/GCA_000007825.1_ASM782v1	12721630	ATCC 14579
Clostridium botulinum B2 275	1379277	PRJNA213573	213573	Terrabacteria group	Firmicutes	3.97819	28	-	AUYX01	13	3892	3667	6/24/14	3/24/17	Contig	Army Medical and Veterinary Research Center	SAMN02869850	GCA_000710985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/985/GCA_000710985.1_B2_275	26341861	B2 275
Enterococcus faecalis X98	565641	PRJNA32953	32953	Terrabacteria group	Firmicutes	2.9427	37.5	-	ACAW01	13	3031	2889	5/21/09	3/22/17	Scaffold	Broad Institute	SAMN02595267	GCA_000157515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/157/515/GCA_000157515.1_ASM15751v1	-	X98
Streptococcus mutans TCI-279	1074181	PRJNA72101	72101	Terrabacteria group	Firmicutes	1.80982	37	-	AGMH01	136	1843	1735	10/6/11	3/22/17	Contig	JCVI	SAMN02436440	GCA_000229845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/845/GCA_000229845.2_SMUT7-NEX_10-279	-	TCI-279
Neisseria gonorrhoeae MU_NG1	1351797	PRJNA209596	209596	Proteobacteria	Betaproteobacteria	2.12682	52.3	-	ATQV01	349	2408	2150	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02338823	GCA_001026385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/385/GCA_001026385.1_ASM102638v1	-	MU_NG1
Enterococcus faecium 503	1134804	PRJNA81995	81995	Terrabacteria group	Firmicutes	2.74673	37.8	-	AMBN01	199	2803	2660	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299479	GCA_000295055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/055/GCA_000295055.2_ASM29505v2	-	503
Stenotrophomonas maltophilia	40324	PRJNA295129	295129	Proteobacteria	Gammaproteobacteria	4.94942	66.5	-	LNIW01	76	4648	4504	1/28/16	4/4/17	Contig	Universitat Autonoma de Barcelona	SAMN04260440	GCA_001542395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/395/GCA_001542395.1_ASM154239v1	-	PG157
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12993	41.2	-	CVYW01	77	2064	1890	6/23/15	3/26/17	Contig	SC	SAMEA1032818	GCA_001176105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/105/GCA_001176105.1_6903_2_11	-	EQUI0060
Pasteurella multocida subsp. multocida	44283	PRJNA300373	300373	Proteobacteria	Gammaproteobacteria	2.3178	40.2	-	LUDE01	15	2198	2110	6/20/16	4/5/17	Scaffold	Sichuan Agricultural University	SAMN04219598	GCA_001670535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/670/535/GCA_001670535.1_ASM167053v1	-	ATCC 2095
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.95604	46.6	-	JTIJ01	59	2983	2802	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196645	GCA_001656675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/675/GCA_001656675.1_ASM165667v1	-	Lrh20
Brucella melitensis	29459	PRJNA400844	400844	Proteobacteria	Alphaproteobacteria	3.30268	57.1718	chromosome 1:CP023171.1; chromosome 2:CP023172.1	-	2	3300	3085	9/12/17	9/12/17	Chromosome	IVRI	SAMN07580939	GCA_002290125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/125/GCA_002290125.1_ASM229012v1	-	2007BM/1
Bacillus anthracis	1392	PRJNA231221	231221	Terrabacteria group	Firmicutes	5.41004	35.3026	chromosome:CP022044.1; plasmid unnamed1:CP022045.1	-	2	6032	5492	6/27/17	6/27/17	Complete Genome	US Food and Drug Administration 	SAMN06173354	GCA_002208785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/785/GCA_002208785.1_ASM220878v1	-	FDAARGOS_341
Bordetella bronchiseptica KM22	1427985	PRJNA229441	229441	Proteobacteria	Betaproteobacteria	5.19973	68.2	-	JNHR01	46	4923	4715	6/10/14	4/2/17	Contig	USDA-ARS	SAMN02415995	GCA_000699925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/925/GCA_000699925.1_BbronchKM22_1.0	26711033	KM22
Corynebacterium diphtheriae	1717	PRJNA362755	362755	Terrabacteria group	Actinobacteria	2.54184	53.5	-	MTQK01	59	2478	2176	2/1/17	4/10/17	Contig	"CMC, Vellore"	SAMN06246970	GCA_001981265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/265/GCA_001981265.1_ASM198126v1	-	CMCTH2020
Mycoplasma pneumoniae	2104	PRJNA291007	291007	Terrabacteria group	Tenericutes	0.819937	40	-	LHPS01	18	808	682	9/22/15	4/10/17	Scaffold	Centre for genomic regulation (CRG)	SAMN03897303	GCA_001296565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/565/GCA_001296565.1_ASM129656v1	26335586	Mympn_3896
Yersinia enterocolitica	630	PRJEB13626	384942	Proteobacteria	Gammaproteobacteria	4.42184	46.9	-	FKKL01	153	4185	3903	5/1/17	5/9/17	Contig	IP	SAMEA3935392	GCA_900079875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/875/GCA_900079875.1_IP35463	-	-
Bacillus anthracis	1392	PRJNA368680	368680	Terrabacteria group	Firmicutes	5.41035	35.3026	chromosome:NZ_CP019588.1/CP019588.1; plasmid pX01:NZ_CP019589.1/CP019589.1	-	2	6027	5631	2/8/17	3/29/17	Complete Genome	Universidade Federal do Rio Grande do Sul	SAMN06270326	GCA_001990245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/245/GCA_001990245.1_ASM199024v1	-	SPV842_15
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.18474	60.1	-	JUWF01	591	4938	4648	7/10/15	3/26/17	Contig	University of Washington	SAMN03197913	GCA_001066015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/015/GCA_001066015.1_ASM106601v1	26230489	709_SMAR
Lactobacillus plantarum	1590	PRJNA241429	241429	Terrabacteria group	Firmicutes	3.32408	44.3	-	JIBX01	33	3267	3065	7/21/14	3/24/17	Contig	Consiglio per la Ricerca e la Sperimentazione in Agricoltura	SAMN02689810	GCA_000731855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/855/GCA_000731855.1_ASM73185v1	25767234	Lp90
Mannheimia haemolytica	75985	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.59747	41	-	LQGQ01	97	2670	2525	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366590	GCA_001931195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/195/GCA_001931195.1_ASM193119v1	-	63667MH
Campylobacter coli 151-9	887285	PRJNA52707	52707	Proteobacteria	delta/epsilon subdivisions	1.68032	31.4	-	AINQ01	107	1727	1633	3/16/12	3/15/17	Contig	Cornell University	SAMN02428943	GCA_000254095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/095/GCA_000254095.2_ASM25409v2	-	151-9
Burkholderia sp. MSMB2041	1637839	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.28885	67.1	-	LOXS01	143	6967	6335	1/21/16	4/11/17	Contig	Northern Arizona University	SAMN03449275	GCA_001524565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/565/GCA_001524565.1_ASM152456v1	-	MSMB2041
Propionibacterium acnes HL007PA1	765118	PRJNA49271	49271	Terrabacteria group	Actinobacteria	2.53054	60.2	-	ADYJ01	25	2583	2443	8/5/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189198	GCA_000145175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/175/GCA_000145175.1_ASM14517v1	-	HL007PA1
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.52264	32.6	-	CUCU01	96	2514	2377	3/31/15	3/26/17	Contig	SC	SAMEA1035104	GCA_001234405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/405/GCA_001234405.1_7067_4_37	-	51-06
Proteus mirabilis	584	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.83122	39	-	JVHK01	72	3529	3349	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197622	GCA_001076715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/715/GCA_001076715.1_ASM107671v1	26230489	429_PMIR
Enterobacter cloacae	550	PRJNA258043	258043	Proteobacteria	Gammaproteobacteria	4.72489	55.4	-	JQGO01	195	4667	4382	9/2/14	3/24/17	Contig	University of Malaya	SAMN02983088	GCA_000747015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/015/GCA_000747015.1_ASM74701v1	-	479
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.28835	54.8	-	FKZG01	55	6148	5848	5/19/16	2/25/17	Scaffold	SC	SAMEA2273580	GCA_900083785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/785/GCA_900083785.1_12045_6_48	-	2880STDY5682495
Cronobacter sakazakii	28141	PRJNA329459	329459	Proteobacteria	Gammaproteobacteria	4.73262	56.9	-	MBRP01	510	4418	4214	4/17/17	4/21/17	Contig	Guangdong Institute of Microbiology	SAMN05412991	GCA_002094495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/495/GCA_002094495.1_ASM209449v1	28057934	cro360A2
Lactobacillus salivarius	1624	PRJNA357984	357984	Terrabacteria group	Firmicutes	1.80176	32.6	-	NBEU01	43	1768	1654	4/5/17	4/8/17	Scaffold	University College Cork	SAMN06163253	GCA_002079745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/745/GCA_002079745.1_ASM207974v1	-	CCuG2753OB
Mycobacterium abscessus 5S-0817	1001735	PRJNA65199	65199	Terrabacteria group	Actinobacteria	5.24888	64	-	AKUB01	12	5362	5189	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00672654	GCA_000271005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/005/GCA_000271005.1_ASM27100v1	24565502	5S-0817
Vibrio sp. V17_P4S1T151	1938670	PRJNA361511	361511	Proteobacteria	Gammaproteobacteria	4.74798	43.5	-	NDIK01	352	4691	4313	8/4/17	8/6/17	Scaffold	Instituto de ecologia	SAMN06251411	GCA_002241335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/335/GCA_002241335.1_ASM224133v1	-	V17_P4S1T151
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.18564	64.2	-	DCFJ01	60	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453205	GCA_002314405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/405/GCA_002314405.1_ASM231440v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.02713	67	-	LPAY01	169	7389	6943	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449361	GCA_001526945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/945/GCA_001526945.1_ASM152694v1	-	MSMB1791WGS
Flavobacterium psychrophilum	96345	PRJDB5594	380100	FCB group	Bacteroidetes/Chlorobi group	2.70711	32.5	-	BDSH01	164	2948	2912	6/2/17	6/2/17	Contig	Kochi University	SAMD00076183	GCA_002207815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/815/GCA_002207815.1_ASM220781v1	-	SSADA-1411
Lactobacillus paracasei subsp. paracasei Lpp71	1256207	PRJNA178435	178435	Terrabacteria group	Firmicutes	2.68409	46.5	-	ANKD01	825	2963	2944	6/11/13	11/13/14	Contig	Danone Research	SAMN02469712	GCA_000410375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/375/GCA_000410375.1_ASM41037v1	23894338	Lpp71
Streptococcus oralis subsp. oralis	1891914	PRJNA304678	304678	Terrabacteria group	Firmicutes	1.95117	41.1	-	NCUR01	10	1944	1844	4/18/17	4/21/17	Scaffold	Slagelse Hospital	SAMN06705617	GCA_002096595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/595/GCA_002096595.1_ASM209659v1	27325438	OD_311844-09
Pseudoalteromonas sp. H71	1348395	PRJNA209414	209414	Proteobacteria	Gammaproteobacteria	4.03008	39.7	-	LODI01	48	3698	3475	12/15/15	4/11/17	Scaffold	University of Arizona	SAMN04293672	GCA_001468485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/485/GCA_001468485.1_ASM146848v1	26868390	H71
Bacillus anthracis str. Sterne	260799	PRJNA236483	236483	Terrabacteria group	Firmicutes	5.40912	35.3026	chromosome:NZ_CP009541.1/CP009541.1; plasmid pXO1:NZ_CP009540.1/CP009540.1	-	2	6028	5606	2/5/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03010431	GCA_000832635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/635/GCA_000832635.1_ASM83263v1	25931591	Sterne
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	4.09644	38.8	-	MDHZ01	249	3975	3780	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022860	GCA_001706195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/195/GCA_001706195.1_ASM170619v1	-	UKK-0536
Citrobacter freundii	546	PRJNA335400	335400	Proteobacteria	Gammaproteobacteria	5.43944	51.7	-	MCOP01	218	5463	5165	11/17/16	4/5/17	Contig	Hospital Universitary 12 de octubre	SAMN05441430	GCA_001880825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/825/GCA_001880825.1_ASM188082v1	-	CF8_ST22
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.03212	55	-	LABA01	66	5021	4765	3/19/15	3/25/17	Contig	JCVI	SAMN03283309	GCA_000957465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/465/GCA_000957465.1_ASM95746v1	-	28134
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.15021	54.9	-	LDBT01	48	5091	4868	5/21/15	4/6/17	Contig	JCVI	SAMN03495956	GCA_001011645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/645/GCA_001011645.1_ASM101164v1	-	GN03732
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.1037	64	-	FVCA01	48	5066	4861	3/10/17	3/18/17	Scaffold	SC	SAMEA2259553	GCA_900130975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/975/GCA_900130975.1_11861_7_16	-	748
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.09884	66.8	-	LPFG01	46	6636	6339	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449480	GCA_001529685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/685/GCA_001529685.1_ASM152968v1	-	MSMB1384WGS
Pseudomonas sp. ARP3	1661386	PRJNA283580	283580	Proteobacteria	Gammaproteobacteria	6.12771	60.3	-	LEKF01	63	5693	5491	6/18/15	4/10/17	Scaffold	University of Wuerzburg	SAMN03653324	GCA_001029595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/595/GCA_001029595.1_ASM102959v1	-	ARP3
Streptomyces sp. CNT360	1288080	PRJNA187952	187952	Terrabacteria group	Actinobacteria	7.72066	72.3	-	AUKO01	41	6686	6226	7/10/13	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440677	GCA_000424785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/785/GCA_000424785.1_ASM42478v1	-	CNT360
Bacillus sp. Root131	1736451	PRJNA297942	297942	Terrabacteria group	Firmicutes	6.52379	34.8	-	LMJQ01	45	7010	6571	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155720	GCA_001429475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/475/GCA_001429475.1_Root131	26633631	Root131
Acinetobacter sp. WC-141	903915	PRJNA53429	53429	Proteobacteria	Gammaproteobacteria	3.93225	38.9	-	AMSS01	91	3873	3584	11/21/12	4/6/17	Contig	Walter Reed Army Institute of Research	SAMN00761232	GCA_000313935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/935/GCA_000313935.1_gacin27v1.0	-	WC-141
Clostridium sp. ATCC 25772	1676991	PRJNA286797	286797	Terrabacteria group	Firmicutes	4.00941	27.1	-	LFRG01	241	3492	3326	2/25/16	4/12/17	Contig	Northern Arizona University	SAMN03780007	GCA_001573875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/875/GCA_001573875.1_ASM157387v1	26939550	ATCC 25772
Sphingomonas sp. Leaf242	1736304	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.30007	65.3	-	LMLW01	14	3926	3813	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151694	GCA_001422045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/045/GCA_001422045.1_Leaf242	26633631	Leaf242
Rhodococcus sp. 15-1189-1-1a	2023143	PRJNA395383	395383	Terrabacteria group	Actinobacteria	6.23667	64.3	-	NPFQ01	69	5894	5679	8/18/17	8/21/17	Contig	Oregon State University	SAMN07414578	GCA_002259155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/155/GCA_002259155.1_ASM225915v1	-	15-1189-1-1a
Enterobacter sp. DC4	1395580	PRJNA217838	217838	Proteobacteria	Gammaproteobacteria	5.21171	55.6	-	AZUB01	30	5076	4861	2/10/14	4/9/17	Contig	Monash University	SAMN02951908	GCA_000568095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/095/GCA_000568095.1_DC4_v1	24625871	DC4
Staphylococcus sp. HMSC068G12	1739407	PRJNA300057	300057	Terrabacteria group	Firmicutes	2.5021	31.9	-	LTWY01	87	2465	2345	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480065	GCA_001813255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/255/GCA_001813255.1_ASM181325v1	-	HMSC068G12
Corynebacterium sp. HMSC067D03	1739289	PRJNA299939	299939	Terrabacteria group	Actinobacteria	2.39097	61.7	-	LTGO01	72	2269	2151	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477600	GCA_001811185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/185/GCA_001811185.1_ASM181118v1	-	HMSC067D03
Arthrobacter sp. OV608	1882768	PRJEB16897	350948	Terrabacteria group	Actinobacteria	4.92922	64.8	-	FOEZ01	71	4519	4321	10/29/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444745	GCA_900110595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/595/GCA_900110595.1_IMG-taxon_2687453691_annotated_assembly	-	OV608
Bradyrhizobium sp. err11	1761772	PRJEB14982	336138	Proteobacteria	Alphaproteobacteria	9.16323	63.2	-	FMAI01	102	8688	8037	8/3/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487809	GCA_900094605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/605/GCA_900094605.1_IMG-taxon_2617270735_annotated_assembly	-	ERR11
Streptococcus sp. HMSC078D02	1739427	PRJNA300077	300077	Terrabacteria group	Firmicutes	2.03398	35.3	-	LTWI01	96	2070	1990	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480350	GCA_001813595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/595/GCA_001813595.1_ASM181359v1	-	HMSC078D02
Mycobacterium sp. GA-2829	1772283	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.50338	68.6	-	LQIT01	99	6222	5974	1/6/16	4/11/17	Contig	JCVI	SAMN04349500	GCA_001499965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/965/GCA_001499965.1_ASM149996v1	-	GA-2829
Prevotella sp. CAG:487	1262928	PRJEB903	206914	FCB group	Bacteroidetes/Chlorobi group	2.99006	49.3	-	CAZM01	204	2550	2507	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138484	GCA_000431935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/935/GCA_000431935.1_MGS487	-	-
Enterococcus sp. 7E2_DIV0204	1834188	PRJNA313452	313452	Terrabacteria group	Firmicutes	4.05678	36.7	-	NGKY01	13	3776	3550	5/16/17	5/24/17	Scaffold	Broad Institute	SAMN04634018	GCA_002140855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/855/GCA_002140855.1_ASM214085v1	-	7E2_DIV0204
Paenibacillus sp. KS1	1849249	PRJNA321323	321323	Terrabacteria group	Firmicutes	6.50819	46.5	-	MAIS01	398	5685	5412	7/6/16	8/7/17	Contig	University of Central Florida	SAMN04990187	GCA_001680695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/695/GCA_001680695.1_ASM168069v1	-	KS1
Thioalkalivibrio sp. ALJ9	1158758	PRJNA185216	185216	Proteobacteria	Gammaproteobacteria	2.93304	65.7	-	AQYE01	11	2814	2692	4/23/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02440420	GCA_000380585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/585/GCA_000380585.1_ASM38058v1	-	ALJ9
Ruminococcus sp. UBA3855	1947421	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.59532	42.9	-	DGHF01	249	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453635	GCA_002392545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/545/GCA_002392545.1_ASM239254v1	28894102	-
Bacteroides sp. N54.MGS-20	1637511	PRJNA277012	277012	FCB group	Bacteroidetes/Chlorobi group	2.97973	43.5	-	LARM01	83	-	-	4/24/15	6/10/15	Contig	The Mayo Clinic	SAMN03450007	GCA_000980475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/475/GCA_000980475.1_ASM98047v1	26021920	-
Prochlorococcus sp. scB245a_519O21	1471517	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.26447	31.6	-	JFNP01	205	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671388	GCA_000634455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/455/GCA_000634455.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. P0109	1895606	PRJNA341024	341024	Proteobacteria	delta/epsilon subdivisions	1.61672	33.5	-	MJKK01	22	1663	1569	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687044	GCA_002138755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/755/GCA_002138755.1_ASM213875v1	28854596	P0109
Microbacterium sp. Cr-K20	1452536	PRJNA236112	236112	Terrabacteria group	Actinobacteria	3.90828	68.6	-	JARE01	82	3799	3652	6/16/14	4/9/17	Scaffold	Central Michigan University	SAMN02594832	GCA_000708325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/325/GCA_000708325.1_Cr-K20	-	Cr-K20
Rhizobium sp. N122	1764272	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.89618	61.4	-	LOKU01	80	6742	6346	6/29/17	7/9/17	Contig	Centro de Ciencias Genomicas UNAM	SAMN04304756	GCA_002211295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/295/GCA_002211295.1_ASM221129v1	-	N122
Mesorhizobium sp. LSJC277A00	1287334	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.49986	62.5	-	AYVM01	60	6442	5883	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359694	GCA_000503135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/135/GCA_000503135.1_Mloti_LSJC277A00	-	LSJC277A00
Bacillus velezensis	492670	PRJNA243331	243331	Terrabacteria group	Firmicutes	4.06284	46.4	-	LYNC01	105	4068	3890	8/23/16	3/22/17	Contig	FDA/CFSAN	SAMN04990132	GCA_001709115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/115/GCA_001709115.1_ASM170911v1	-	CFSAN034340
Gilliamella apicola	1196095	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.90517	33.9	-	NARZ01	82	2630	2527	5/16/17	5/23/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603529	GCA_002141885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/885/GCA_002141885.1_ASM214188v1	-	N6
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.57759	57.5	-	FXOA01	68	5613	5310	4/28/17	5/6/17	Scaffold	SC	SAMEA2609425	GCA_900181025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/025/GCA_900181025.1_14893_8_91	-	3189STDY5864756
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79706	32.3	-	FQRM01	12	2801	2625	11/25/16	4/6/17	Contig	SC	SAMEA3449099	GCA_900128265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/265/GCA_900128265.1_17175_3_43	-	3688STDY6125091
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.53913	67.8	-	LPNA01	174	6850	6468	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449687	GCA_001534515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/515/GCA_001534515.1_ASM153451v1	-	MSMB1545WGS
Xanthomonas axonopodis pv. manihotis str. IBSBF 614	1185697	PRJNA163789	163789	Proteobacteria	Gammaproteobacteria	4.73079	65	-	AKEC01	706	4508	3728	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090333	GCA_000266785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/785/GCA_000266785.1_IBSBF614	22699502	IBSBF 614
Xanthomonas axonopodis pv. manihotis str. UA323	1185664	PRJNA163723	163723	Proteobacteria	Gammaproteobacteria	4.87201	65.1	-	AKEO01	151	4300	3982	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090345	GCA_000266805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/805/GCA_000266805.1_UA323	22699502	UA323
Burkholderia stagnalis	1503054	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.52482	67.7	-	LPMO01	96	6842	6504	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449674	GCA_001534525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/525/GCA_001534525.1_ASM153452v1	-	MSMB837WGS
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79587	32.3	-	FQRN01	15	2804	2625	11/25/16	4/6/17	Contig	SC	SAMEA3449100	GCA_900128275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/275/GCA_900128275.1_17175_3_44	-	3688STDY6125092
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.80133	57	-	FXOJ01	104	5875	5505	4/28/17	5/6/17	Scaffold	SC	SAMEA2609426	GCA_900181045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/045/GCA_900181045.1_14936_2_91	-	3189STDY5864945
Gilliamella apicola	1196095	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	3.06385	33.9	-	NARY01	166	2700	2571	5/16/17	5/24/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603528	GCA_002141905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/905/GCA_002141905.1_ASM214190v1	-	AM4
Bacillus velezensis	492670	PRJNA338084	338084	Terrabacteria group	Firmicutes	4.11289	46.4	-	MDCI01	2	4079	3862	9/12/16	3/22/17	Contig	National Academy of Agrigultural Science 	SAMN05520939	GCA_001723375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/375/GCA_001723375.1_ASM172337v1	-	HJ18-4
Mesorhizobium sp. LSJC285A00	1287338	PRJNA171524	171524	Proteobacteria	Alphaproteobacteria	6.70164	62.5	-	AYVK01	120	6668	6057	12/3/13	4/17/17	Contig	University of Southern California	SAMN02359696	GCA_000503155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/155/GCA_000503155.1_Mloti_LSJC285A00	-	LSJC285A00
Rhizobium sp. R634	1764274	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.73206	61.6	-	LOKW01	29	6452	6234	6/29/17	7/1/17	Contig	Centro de Ciencias Genomicas UNAM	SAMN04304758	GCA_002211305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/305/GCA_002211305.1_ASM221130v1	-	R634
Microbacterium sp. CH1	1770208	PRJNA305940	305940	Terrabacteria group	Actinobacteria	3.54328	70.2	-	LOSO01	24	3461	3348	3/21/16	4/12/17	Scaffold	CINVESTAV-Langebio	SAMN04335738	GCA_001595495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/495/GCA_001595495.1_ASM159549v1	-	CH1
Campylobacter sp. P0135	1895610	PRJNA341028	341028	Proteobacteria	delta/epsilon subdivisions	1.55757	33.7	-	MJKO01	18	1606	1521	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687048	GCA_002138775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/775/GCA_002138775.1_ASM213877v1	28854596	P0135
Prochlorococcus sp. scB245a_520B18	1471518	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.43067	31.3	-	JFNQ01	474	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671389	GCA_000634475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/475/GCA_000634475.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Bacteroides sp. SM23_62	1703352	PRJNA270657	270657	FCB group	Bacteroidetes/Chlorobi group	5.78468	45.9	-	LJUP01	403	4876	4378	9/30/15	9/30/15	Contig	University of Texas	SAMN03994209	GCA_001303955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/303/955/GCA_001303955.1_ASM130395v1	25922666	-
Ruminococcus sp. UBA3827	1947420	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.14291	40.1	-	DGIH01	258	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456336	GCA_002393085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/085/GCA_002393085.1_ASM239308v1	28894102	-
Thioalkalivibrio sp. AKL19	1266914	PRJNA183051	183051	Proteobacteria	Gammaproteobacteria	2.88491	66.8	-	ATUK01	18	2781	2639	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02440567	GCA_000420165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/165/GCA_000420165.1_ASM42016v1	-	AKL19
Paenibacillus sp. TI45-13ar	1886670	PRJNA338088	338088	Terrabacteria group	Firmicutes	5.36038	39	-	MDER01	116	4706	4567	9/7/16	4/13/17	Contig	National Academy of Agrigultural Science	SAMN05526182	GCA_001721045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/045/GCA_001721045.1_ASM172104v1	-	TI45-13ar
Enterococcus sp. 8G7_MSG3316	1834191	PRJNA313452	313452	Terrabacteria group	Firmicutes	3.20248	41.6	-	NGKU01	3	3122	2953	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634085	GCA_002140915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/915/GCA_002140915.1_ASM214091v1	-	8G7_MSG3316
Prevotella sp. CAG:924	1262938	PRJEB1036	206690	FCB group	Bacteroidetes/Chlorobi group	2.79173	49.8	-	CAXK01	210	2265	2225	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138486	GCA_000431975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/975/GCA_000431975.1_MGS924	-	-
Mycobacterium sp. IS-1556	1772276	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.21404	67	-	LQIM01	42	4990	4856	1/6/16	4/11/17	Contig	JCVI	SAMN04349493	GCA_001499985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/985/GCA_001499985.1_ASM149998v1	-	IS-1556
Streptococcus sp. HMSC078D09	1739430	PRJNA300080	300080	Terrabacteria group	Firmicutes	2.16357	41.6	-	LTWF01	31	2135	2029	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480352	GCA_001813675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/675/GCA_001813675.1_ASM181367v1	-	HMSC078D09
Bradyrhizobium sp. Rc2d	1855321	PRJEB15911	348221	Proteobacteria	Alphaproteobacteria	9.57822	62.8	-	FNCU01	117	9149	8477	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216338	GCA_900099855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/855/GCA_900099855.1_IMG-taxon_2654588102_annotated_assembly	-	Rc2d
Arthrobacter sp. TB 26	494420	PRJNA197486	197486	Terrabacteria group	Actinobacteria	4.32461	66.4	-	AUPJ01	556	4161	3440	7/15/13	4/17/17	Scaffold	University of Florence	SAMN02471755	GCA_000427315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/315/GCA_000427315.1_ArtTB261.0	24231161	TB 26
Corynebacterium sp. HMSC063F04	1739292	PRJNA299942	299942	Terrabacteria group	Actinobacteria	2.42514	58.8	-	LTGN01	35	2115	2041	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477601	GCA_001811205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/205/GCA_001811205.1_ASM181120v1	-	HMSC063F04
Staphylococcus sp. HMSC078E07	1739409	PRJNA300059	300059	Terrabacteria group	Firmicutes	2.20266	31.4	-	LTWW01	32	2180	2103	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480073	GCA_001813345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/345/GCA_001813345.1_ASM181334v1	-	HMSC078E07
Enterobacter sp. DC3	1395579	PRJNA217837	217837	Proteobacteria	Gammaproteobacteria	5.0763	55.7	-	AZXZ01	34	4939	4747	2/10/14	4/9/17	Contig	Monash University	SAMN02951909	GCA_000568155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/155/GCA_000568155.1_DC3_v1	24625871	DC3
Rhodococcus sp. PBTS 2	1653479	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.26584	64.7	-	NOWH01	29	4961	4829	8/18/17	8/21/17	Contig	Oregon State University	SAMN07376390	GCA_002259165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/165/GCA_002259165.1_ASM225916v1	-	PBTS 2
Sphingomonas sp. Leaf257	1736309	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.41456	65.8	-	LMMH01	37	4147	3982	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151699	GCA_001422185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/185/GCA_001422185.1_Leaf257	26633631	Leaf257
Clostridium sp. W14A	1849176	PRJNA321289	321289	Terrabacteria group	Firmicutes	3.82263	51.5	-	MBSV01	127	3825	3647	7/27/16	4/13/17	Contig	Bangor University	SAMN04978860	GCA_001695555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/555/GCA_001695555.1_ASM169555v1	-	W14A
Acinetobacter sp. WC-487	903917	PRJNA53433	53433	Proteobacteria	Gammaproteobacteria	4.11508	38.7	-	AMZR01	121	4062	3778	11/26/12	5/18/17	Contig	Walter Reed Army Institute of Research	SAMN00761233	GCA_000314595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/595/GCA_000314595.1_gacin29v1.0	-	WC-487
Bacillus sp. Soil531	1736389	PRJNA298127	298127	Terrabacteria group	Firmicutes	5.80343	37.6	-	LMSY01	34	5856	5634	11/2/15	4/11/17	Scaffold	ETH Zurich	SAMN04155654	GCA_001429825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/825/GCA_001429825.1_Soil531	26633631	Soil531
Streptomyces sp. CNQ865	1288081	PRJNA187953	187953	Terrabacteria group	Actinobacteria	8.6128	73.6	-	AUKP01	101	7382	7150	7/10/13	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441151	GCA_000424805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/805/GCA_000424805.1_ASM42480v1	-	CNQ865
Pseudomonas sp. In5	665135	PRJNA292855	292855	Proteobacteria	Gammaproteobacteria	7.3188	59.4	-	LIRD01	18	6503	6332	10/9/15	4/16/17	Scaffold	University of Copenhagen	SAMN03992868	GCA_001308855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/308/855/GCA_001308855.1_ASM130885v1	25784695	In5
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.12014	66.7	-	LPCZ01	77	6732	6379	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449418	GCA_001529755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/755/GCA_001529755.1_ASM152975v1	-	MSMB1061WGS
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.10332	64	-	FVCB01	53	5069	4861	3/10/17	3/18/17	Scaffold	SC	SAMEA2259554	GCA_900130995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/995/GCA_900130995.1_11861_7_17	-	749
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.5302	54.9	-	LDBY01	58	5502	5235	5/21/15	4/6/17	Contig	JCVI	SAMN03495961	GCA_001011795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/795/GCA_001011795.1_ASM101179v1	-	GN04835
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.06726	55	-	LAAV01	98	5061	4798	3/19/15	3/25/17	Contig	JCVI	SAMN03283314	GCA_000957505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/505/GCA_000957505.1_ASM95750v1	-	32534
Citrobacter freundii	546	PRJNA335556	335556	Proteobacteria	Gammaproteobacteria	4.99434	52	-	MCOQ01	203	4942	4685	11/17/16	4/6/17	Contig	Hospital Universitary 12 de octubre	SAMN05447746	GCA_001880835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/835/GCA_001880835.1_ASM188083v1	-	CF10_ST11
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	3.96434	38.9	-	MDIF01	145	3914	3696	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022865	GCA_001706205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/205/GCA_001706205.1_ASM170620v1	-	UKK-0542
Corynebacterium pseudotuberculosis	1719	PRJNA353917	353917	Terrabacteria group	Actinobacteria	2.43544	52.2	chromosome:NZ_CP019159.1/CP019159.1	-	1	2247	1939	1/23/17	4/10/17	Chromosome	Federal University of Para	SAMN06028555	GCA_001969465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/465/GCA_001969465.1_ASM196946v1	-	PA05
Pseudoalteromonas sp. 10-33	1761890	PRJNA209414	209414	Proteobacteria	Gammaproteobacteria	4.2013	39.8	-	LOFI01	29	3816	3605	12/17/15	4/11/17	Scaffold	University of Arizona	SAMN04293677	GCA_001469195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/195/GCA_001469195.1_ASM146919v1	26868390	Oct-33
Streptococcus oralis	1303	PRJNA304333	304333	Terrabacteria group	Firmicutes	2.08695	42	-	LQOC01	376	1730	1719	3/2/16	3/24/16	Scaffold	University of Kaiserslautern	SAMN04325032	GCA_001578965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/965/GCA_001578965.1_ASM157896v1	27303717	DD20
Lactobacillus paracasei subsp. paracasei Lpp41	1256208	PRJNA178436	178436	Terrabacteria group	Firmicutes	2.70536	46.1	-	ANKE01	827	3038	3012	6/11/13	11/13/14	Contig	Danone Research	SAMN02469724	GCA_000410395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/395/GCA_000410395.1_ASM41039v1	23894338	Lpp41
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.43773	67.2	-	LPBI01	155	6817	6394	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449371	GCA_001526955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/955/GCA_001526955.1_ASM152695v1	-	MSMB1807WGS
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.28835	64.2	-	DCFG01	107	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453767	GCA_002315115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/115/GCA_002315115.1_ASM231511v1	28894102	-
Vibrio sp. V15_P4S5T153	1938669	PRJNA361511	361511	Proteobacteria	Gammaproteobacteria	5.09205	43.3	-	NDIJ01	24	5108	4803	8/4/17	8/7/17	Scaffold	Instituto de ecologia	SAMN06251410	GCA_002241355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/355/GCA_002241355.1_ASM224135v1	-	V15_P4S5T153
Mycobacterium abscessus 5S-1212	1001733	PRJNA65195	65195	Terrabacteria group	Actinobacteria	5.23984	64	-	AKUC01	7	5355	5183	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00672656	GCA_000271025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/025/GCA_000271025.1_ASM27102v1	-	5S-1212
Lactobacillus salivarius	1624	PRJNA357984	357984	Terrabacteria group	Firmicutes	2.08553	33	-	NBEX01	133	2118	1946	4/5/17	4/8/17	Scaffold	University College Cork	SAMN06163250	GCA_002079765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/765/GCA_002079765.1_ASM207976v1	-	AH4331
Cronobacter sakazakii	28141	PRJNA329459	329459	Proteobacteria	Gammaproteobacteria	4.33372	57.4	-	MBRR01	449	4181	3915	4/17/17	4/21/17	Contig	Guangdong Institute of Microbiology	SAMN05412995	GCA_002094505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/505/GCA_002094505.1_ASM209450v1	28057934	cro810A3
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.97616	55.1	-	FKZI01	62	5784	5514	5/19/16	2/21/17	Scaffold	SC	SAMEA2273817	GCA_900083795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/795/GCA_900083795.1_12045_7_49	-	2880STDY5682743
Enterobacter cloacae	550	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.90393	55.6	-	JTBF01	3	4895	4551	11/14/14	7/6/17	Contig	US Food and Drug Administration 	SAMN02934530	GCA_000783675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/675/GCA_000783675.1_ASM78367v1	-	FDAARGOS_77
Proteus mirabilis	584	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.82037	39	-	JVHI01	76	3499	3337	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197624	GCA_001076755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/755/GCA_001076755.1_ASM107675v1	26230489	430_PMIR
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.43899	32.6	-	CUCK01	84	2394	2282	3/31/15	3/26/17	Contig	SC	SAMEA1035145	GCA_001234445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/445/GCA_001234445.1_7067_4_27	-	25-38
Propionibacterium acnes HL043PA1	765072	PRJNA49175	49175	Terrabacteria group	Actinobacteria	2.53345	60.2	-	ADXP01	28	2586	2448	8/5/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189215	GCA_000145195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/195/GCA_000145195.1_ASM14519v1	-	HL043PA1
Burkholderia sp. MSMB2042	1637840	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.28615	67.1	-	LOXT01	134	6961	6341	1/21/16	4/11/17	Contig	Northern Arizona University	SAMN03449276	GCA_001524585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/585/GCA_001524585.1_ASM152458v1	-	MSMB2042
Campylobacter coli LMG 9853	887307	PRJNA52751	52751	Proteobacteria	delta/epsilon subdivisions	1.66632	31.3	-	AINR01	85	1719	1628	3/16/12	3/15/17	Contig	Cornell University	SAMN02429063	GCA_000254115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/115/GCA_000254115.2_ASM25411v2	-	LMG 9853
Mannheimia haemolytica	75985	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.57519	41	-	LQFP01	118	2642	2447	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366563	GCA_001931285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/285/GCA_001931285.1_ASM193128v1	-	32754MH
Lactobacillus plantarum	1590	PRJNA252100	252100	Terrabacteria group	Firmicutes	3.19469	44.5	-	JOJT01	83	3089	2945	8/26/14	3/24/17	Contig	Cornell University	SAMN02849421	GCA_000743895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/895/GCA_000743895.1_ASM74389v1	-	DmCS_001
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.21305	60	-	JUWR01	193	4875	4725	7/10/15	3/26/17	Contig	University of Washington	SAMN03197901	GCA_001066945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/945/GCA_001066945.1_ASM106694v1	26230489	698_SMAR
Methanosarcina mazei JCM 9314	1293038	PRJDB784	243696	Euryarchaeota	Methanomicrobia	4.22385	41.7	-	BBBC01	309	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000479	GCA_001315865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/865/GCA_001315865.1_ASM131586v1	-	JCM 9314
Yersinia enterocolitica	630	PRJEB13626	384942	Proteobacteria	Gammaproteobacteria	4.45817	47	-	FKKS01	141	4185	3926	5/1/17	5/9/17	Contig	IP	SAMEA3935389	GCA_900079885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/885/GCA_900079885.1_IP134	-	-
Mycoplasma pneumoniae	2104	PRJNA291007	291007	Terrabacteria group	Tenericutes	0.823018	40.1	-	LHPU01	14	805	693	9/22/15	4/4/17	Scaffold	Centre for genomic regulation (CRG)	SAMN03897305	GCA_001296585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/585/GCA_001296585.1_ASM129658v1	26335586	Mympn_4010
Corynebacterium diphtheriae	1717	PRJNA362754	362754	Terrabacteria group	Actinobacteria	2.46276	53.5	-	MTQJ01	87	2412	2109	2/1/17	4/10/17	Contig	"CMC, Vellore"	SAMN06246969	GCA_001981275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/275/GCA_001981275.1_ASM198127v1	-	CMCTH1112
Bordetella bronchiseptica NBRC 13691	1216982	PRJDB244	171912	Proteobacteria	Betaproteobacteria	5.11542	68.3	-	BCZI01	193	4937	4690	3/11/16	4/5/17	Contig	National Institute of Technology and Evaluation	SAMD00046893	GCA_001598655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/655/GCA_001598655.1_ASM159865v1	-	NBRC 13691
Bacillus anthracis str. V770-NP-1R	1449979	PRJNA235226	235226	Terrabacteria group	Firmicutes	5.4104	35.3026	chromosome:NZ_CP009598.1/CP009598.1; plasmid pXO1:NZ_CP009597.1/CP009597.1	-	2	6027	5628	2/5/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03092715	GCA_000832785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/785/GCA_000832785.1_ASM83278v1	25931591	V770-NP-1R
Brucella melitensis bv. 1 str. Rev.1	520464	PRJNA33565	33565	Proteobacteria	Alphaproteobacteria	3.30582	57.1	-	ACEG01	26	3341	3104	2/18/09	3/30/17	Scaffold	Broad Institute	SAMN02595288	GCA_000158695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/695/GCA_000158695.1_ASM15869v1	-	Rev.1
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.93771	46.6	-	JTIL01	93	2990	2743	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196650	GCA_001656685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/685/GCA_001656685.1_ASM165668v1	-	Lrh19
Pasteurella multocida subsp. multocida	44283	PRJNA300372	300372	Proteobacteria	Gammaproteobacteria	2.3181	40.3	-	LUDD01	23	2181	2081	6/20/16	4/5/17	Scaffold	Sichuan Agricultural University	SAMN04219590	GCA_001670545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/670/545/GCA_001670545.1_ASM167054v1	-	ATCC 1702
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.126	41.2	-	CVYY01	84	2049	1875	6/23/15	3/26/17	Contig	SC	SAMEA1032820	GCA_001176125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/125/GCA_001176125.1_6830_4_83	-	EQUI0228
Stenotrophomonas maltophilia NBRC 14161	1220593	PRJDB412	172611	Proteobacteria	Gammaproteobacteria	4.93672	66.2	-	BCUI01	131	4635	4479	2/23/16	3/28/17	Contig	National Institute of Technology and Evaluation	SAMD00046746	GCA_001591205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/205/GCA_001591205.1_ASM159120v1	-	NBRC 14161
Enterococcus faecium ERV168	1134823	PRJNA82035	82035	Terrabacteria group	Firmicutes	2.9836	37.7	-	AMAU01	204	3053	2912	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299498	GCA_000295075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/075/GCA_000295075.2_ASM29507v2	-	ERV168
Neisseria gonorrhoeae MU_NG9	1351804	PRJNA209637	209637	Proteobacteria	Betaproteobacteria	2.08443	52.4	-	ATRB01	405	2381	2090	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02338829	GCA_001026405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/405/GCA_001026405.1_ASM102640v1	-	MU_NG9
Streptococcus mutans TCI-280	1074182	PRJNA72103	72103	Terrabacteria group	Firmicutes	1.81879	37	-	AGMI01	119	1840	1730	10/6/11	3/22/17	Contig	JCVI	SAMN02436610	GCA_000229865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/865/GCA_000229865.2_SMUT7-NEX_11-280	-	TCI-280
Enterococcus faecalis TX0104	491074	PRJNA30623	30623	Terrabacteria group	Firmicutes	3.15648	37.4	-	ACGL01	95	3241	3024	2/18/09	3/22/17	Scaffold	Baylor College of Medicine	SAMN00002243	GCA_000159255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/255/GCA_000159255.1_ASM15925v1	-	TX0104
Clostridium botulinum A2B3 87	1379740	PRJNA213609	213609	Terrabacteria group	Firmicutes	4.16855	27.8566	plasmid p1_A2B3_87:NZ_AUZB01000012.1/AUZB01000012.1; plasmid p2_A2B3_87:NZ_AUZB01000013.1/AUZB01000013.1	AUZB01	13	4012	3817	6/24/14	3/24/17	Contig	Army Medical and Veterinary Research Center	SAMN02869849	GCA_000710995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/995/GCA_000710995.1_A2B3_87	25814616	A2B3 87
Bacillus anthracis str. A16R	673518	PRJNA40353	40353	Terrabacteria group	Firmicutes	5.40945	35.3026	chromosome:CP001974.1; plasmid pXO1:CP001975.1	-	2	5764	5276	1/3/14	3/24/15	Complete Genome	Beijing Genomics Institute	SAMN02641484	GCA_000512775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/775/GCA_000512775.1_ASM51277v1	-	A16R
Bacillus subtilis subsp. subtilis	135461	PRJNA343182	343182	Terrabacteria group	Firmicutes	4.21795	43.5	chromosome:NZ_CP017312.1/CP017312.1	-	1	4422	4252	10/3/16	3/28/17	Chromosome	University of Goettingen	SAMN05781320	GCA_001750745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/745/GCA_001750745.1_ASM175074v1	-	QB5412
Vibrio parahaemolyticus	670	PRJNA288141	288141	Proteobacteria	Gammaproteobacteria	5.05699	45.3	-	LIRT01	60	4869	4646	9/9/15	3/26/17	Scaffold	Health Canada	SAMN03799836	GCA_001280645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/645/GCA_001280645.1_ASM128064v1	-	ISF-94-1
Streptococcus mitis	28037	PRJNA308844	308844	Terrabacteria group	Firmicutes	2.01527	40	-	LROU01	154	2277	2244	3/11/16	3/11/16	Contig	University of Kaiserslautern	SAMN04432975	GCA_001588595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/595/GCA_001588595.1_ASM158859v1	-	M3-1
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.96536	38	-	MLKZ01	694	2074	1722	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297013	GCA_001867525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/525/GCA_001867525.1_ASM186752v1	27118061	AWRIB124
Xanthomonas oryzae pv. oryzae	64187	PRJNA269434	269434	Proteobacteria	Gammaproteobacteria	4.26725	63.9	-	JXFE01	412	4276	3438	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252527	GCA_001927875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/875/GCA_001927875.1_ASM192787v1	-	DXO-216
Campylobacter fetus subsp. fetus	32019	PRJEB12566	312809	Proteobacteria	delta/epsilon subdivisions	2.04293	33.7	-	FIZQ01	34	1916	1847	2/20/16	4/10/17	Scaffold	WTSI	SAMEA3298594	GCA_900060165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/165/GCA_900060165.1_16473_4_68	-	RC7
Xanthomonas citri subsp. citri	611301	PRJEB7150	306107	Proteobacteria	Gammaproteobacteria	5.29196	64.6	-	CCWB01	30	5019	4945	12/16/15	12/16/15	Scaffold	Genoscope CEA	SAMEA2752228	GCA_001498875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/875/GCA_001498875.1_ASX_S_PRJEB7150_v1	-	-
Brucella abortus 67/93	1169212	PRJNA173513	173513	Proteobacteria	Alphaproteobacteria	3.30775	57.2	-	AQJD01	5	3388	3140	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00839710	GCA_000370165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/165/GCA_000370165.1_Bruc_abor_67_93_V1	-	67/93
Francisella tularensis subsp. tularensis 70001275	1208319	PRJNA170180	170180	Proteobacteria	Gammaproteobacteria	1.81532	32.3	-	AMPP01	25	1878	1587	11/15/12	3/31/17	Contig	Dugway Proving Ground	SAMN02469747	GCA_000313275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/275/GCA_000313275.1_Ft1.0	-	70001275
Shigella boydii	621	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.25822	59.4	-	JWBK01	200	5106	4905	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03197102	GCA_001062045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/045/GCA_001062045.1_ASM106204v1	26230489	1146_SBOY
Clostridioides difficile ATCC 9689 = DSM 1296	1121308	PRJNA169800	169800	Terrabacteria group	Firmicutes	4.20767	28.4	-	AQWV01	70	3956	3818	4/20/13	5/18/17	Contig	DOE Joint Genome Institute	SAMN02441391	GCA_000376285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/285/GCA_000376285.1_ASM37628v1	-	ATCC 9689
Vibrio cholerae HC-19A1	991952	PRJNA63911	63911	Proteobacteria	Gammaproteobacteria	4.0334	47.5	-	AGUJ01	96	3864	3686	11/4/11	3/22/17	Scaffold	Institute for Genome Sciences	SAMN00262260	GCA_000234965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/965/GCA_000234965.1_ASM23496v1	-	HC-19A1
Ralstonia solanacearum	305	PRJNA381968	381968	Proteobacteria	Betaproteobacteria	5.77066	66.4	-	NCTK01	2	5178	4781	8/14/17	8/16/17	Contig	University of Wisconsin-Madison	SAMN06697627	GCA_002251695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/695/GCA_002251695.1_ASM225169v1	-	UW25
Bacillus thuringiensis serovar tolworthi NA205-3	1306023	PRJNA193288	193288	Terrabacteria group	Firmicutes	6.51005	34.7	-	AYXQ01	169	6869	6501	2/14/14	4/18/17	Contig	Universidad Publica de Navarra	SAMN02952956	GCA_000571955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/955/GCA_000571955.1_Na205-2_Genome_assembly	24625875	NA205-3
Bacillus anthracis	1392	PRJNA237808	237808	Terrabacteria group	Firmicutes	5.40338	35.3025	chromosome:NZ_CP009325.1/CP009325.1; plasmid 1:NZ_CP009324.1/CP009324.1	-	2	6024	5639	2/5/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03010430	GCA_000832425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/425/GCA_000832425.1_ASM83242v1	25931591	PAK-1
Chryseobacterium piperi	558152	PRJNA342323	342323	FCB group	Bacteroidetes/Chlorobi group	4.50183	35.3	chromosome:NZ_CP023049.1/CP023049.1	-	1	3982	3721	9/5/17	9/7/17	Complete Genome	FDA	SAMN07488153	GCA_002285635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/635/GCA_002285635.1_ASM228563v1	-	ATCC BAA-1782
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.20482	67	-	MUQQ01	166	7788	7343	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001826	GCA_001991555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/555/GCA_001991555.1_ASM199155v1	-	VC7603
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.17996	38.7	-	NGPL01	106	2206	1984	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848393	GCA_002253825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/825/GCA_002253825.1_ASM225382v1	-	114h
Bacteroides fragilis str. S6R5	1339320	PRJNA206163	206163	FCB group	Bacteroidetes/Chlorobi group	5.24925	43.4	-	JGET01	80	4717	4419	3/20/14	4/2/17	Contig	IGS	SAMN02314561	GCA_000599045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/045/GCA_000599045.1_ASM59904v1	-	S6R5
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.67118	50.8	-	CXJE01	378	5236	4472	7/16/15	2/24/17	Contig	SC	SAMEA2003388	GCA_001261035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/035/GCA_001261035.1_8289_7_90	-	87065
Bacillus cereus	1396	PRJNA326995	326995	Terrabacteria group	Firmicutes	5.3691	35.3	chromosome:NZ_CP016315.1/CP016315.1	-	1	5622	5248	7/5/17	7/7/17	Complete Genome	Korea Food Research Institute	SAMN05300203	GCA_002214705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/705/GCA_002214705.1_ASM221470v1	-	D12_2
Bacillus licheniformis	1402	PRJNA296449	296449	Terrabacteria group	Firmicutes	4.33699	45.8	-	LKPN01	32	4569	4342	12/30/16	4/6/17	Scaffold	TIFN	SAMN04127600	GCA_001925115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/925/115/GCA_001925115.1_ASM192511v1	27994575	B4094
Vibrio vulnificus	672	PRJNA355116	355116	Proteobacteria	Gammaproteobacteria	4.91549	46.6	-	NOJD01	142	4638	4388	8/30/17	9/1/17	Contig	FDA	SAMN06062370	GCA_002278505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/505/GCA_002278505.1_ASM227850v1	-	WAPHLVBRA00005
Pseudomonas syringae pv. actinidiae ICMP 19103	1194415	PRJNA167430	167430	Proteobacteria	Gammaproteobacteria	6.01099	58.8	-	AOJQ01	444	5744	5280	7/1/13	3/24/17	Contig	The New Zealand Institute for Plant & Food Research Limited	SAMN02470794	GCA_000416525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/525/GCA_000416525.1_ASM41652v1	-	ICMP 19103
Streptococcus suis R735	1214165	PRJNA171440	171440	Terrabacteria group	Firmicutes	1.94957	41.4	-	ALLS01	41	1943	1836	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469503	GCA_000440795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/795/GCA_000440795.1_version1	-	R735
Streptococcus agalactiae	1311	PRJNA254643	254643	Terrabacteria group	Firmicutes	2.17527	35.5	-	LRQM01	52	2272	2171	2/2/16	3/19/17	Scaffold	The Genome Institute at Washington University	SAMN03948584	GCA_001546695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/695/GCA_001546695.1_ASM154669v1	-	PSS_7632a
Bacillus cereus	1396	PRJNA329383	329383	Terrabacteria group	Firmicutes	5.3586	35.3	chromosome:NZ_CP017234.1/CP017234.1	-	1	5663	5329	7/5/17	7/7/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN05411284	GCA_002214765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/765/GCA_002214765.1_ASM221476v1	-	FORC_048
Bartonella sp. JB15	1933906	PRJNA360985	360985	Proteobacteria	Alphaproteobacteria	1.49402	35.3	chromosome:NZ_CP019787.1/CP019787.1	-	1	1294	1143	3/7/17	3/10/17	Complete Genome	University of Basel	SAMN06213868	GCA_002022605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/605/GCA_002022605.1_ASM202260v1	-	JB15
Bifidobacterium longum	216816	PRJNA398177	398177	Terrabacteria group	Actinobacteria	2.37423	60	-	NQMV01	43	2120	1936	8/29/17	8/30/17	Contig	Translational Health Science and Technology Institute	SAMN07503177	GCA_002276185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/185/GCA_002276185.1_ASM227618v1	-	Indica
Shigella flexneri	623	PRJNA315925	315925	Proteobacteria	Gammaproteobacteria	4.85784	50.5	-	LVIS01	503	5655	4413	5/20/16	8/8/17	Contig	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04570186	GCA_001649045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/045/GCA_001649045.1_ASM164904v1	-	HN4s04
Bacillus anthracis str. A0442	486621	PRJNA27915	27915	Terrabacteria group	Firmicutes	5.37484	35.2	-	ABKG01	46	5983	5507	2/8/08	5/18/17	Scaffold	Los Alamos National Laboratory	SAMN02470279	GCA_000181935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/181/935/GCA_000181935.1_ASM18193v1	-	A0442
Pseudomonas putida	303	PRJNA278654	278654	Proteobacteria	Gammaproteobacteria	5.83022	61.4	-	LBME01	64	5454	5135	5/8/15	4/3/17	Scaffold	Universidad de Santiago de Chile	SAMN03421250	GCA_001005285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/285/GCA_001005285.1_ASM100528v1	-	ATH-43
Leptospira interrogans serovar Pyrogenes str. Sri Lanka 30	1291356	PRJNA188976	188976	Spirochaetes	Spirochaetia	5.03249	35.2	-	AOWO01	208	4759	4313	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920597	GCA_000342685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/685/GCA_000342685.1_CA_glsol055	-	Sri Lanka 30
Streptococcus pyogenes ABC020054973	1439246	PRJNA233294	233294	Terrabacteria group	Firmicutes	1.8218	38.5	-	JJFB01	3	1863	1734	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567643	GCA_000629645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/645/GCA_000629645.1_Stre_pyog_ABC020054973_V1	-	ABC020054973
Bartonella sp. JB63	1933907	PRJNA360985	360985	Proteobacteria	Alphaproteobacteria	1.49369	35.3	chromosome:NZ_CP019788.1/CP019788.1	-	1	1296	1174	3/7/17	3/10/17	Complete Genome	University of Basel	SAMN06213869	GCA_002022665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/665/GCA_002022665.1_ASM202266v1	-	JB63
Bacillus cereus	1396	PRJNA295362	295362	Terrabacteria group	Firmicutes	5.43012	35.3	chromosome:NZ_CP012691.1/CP012691.1	-	1	5671	5345	9/7/16	3/28/17	Complete Genome	"FOOD-borne Pathogen Omics Research Center, FORC"	SAMN04046553	GCA_001721145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/145/GCA_001721145.1_ASM172114v1	-	FORC_024
Streptococcus pneumoniae MNZ11b	1315307	PRJNA196245	196245	Terrabacteria group	Firmicutes	2.02178	39.6	-	ASJW01	54	2198	1979	6/12/13	3/2/17	Scaffold	University of Mississippi medical center	SAMN02471899	GCA_000411715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/715/GCA_000411715.1_ASM41171v1	23887920	MNZ11b
Herbinix luporum	1679721	PRJEB10631	295670	Terrabacteria group	Firmicutes	2.60935	35.3	chromosome I:NZ_LN879430.1/LN879430.1	-	1	2413	2279	9/14/15	6/10/17	Complete Genome	CEBITEC	SAMEA3518679	GCA_900070325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/070/325/GCA_900070325.1_SD1D	-	SD1D
Mycobacterium tuberculosis 18b	1452723	PRJNA236012	236012	Terrabacteria group	Actinobacteria	4.41195	65.6	chromosome:NZ_CP007299.1/CP007299.1	-	1	4283	4108	2/10/15	3/11/17	Chromosome	EPFL	SAMN02595073	GCA_000835125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/835/125/GCA_000835125.1_ASM83512v1	-	18b
Haemophilus influenzae	727	PRJNA288989	288989	Proteobacteria	Gammaproteobacteria	1.77141	37.9	-	LHSN01	22	1745	1634	9/24/15	3/26/17	Contig	University of Oklahoma Health Sciences Center	SAMN03840617	GCA_001298205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/205/GCA_001298205.1_ASM129820v1	-	HI2192
Mycobacterium bovis BCG	33892	PRJEB8560	294541	Terrabacteria group	Actinobacteria	4.30318	65.6	-	CUWJ01	1	4188	3980	9/1/15	4/4/17	Scaffold	KAUST	SAMEA3257668	GCA_001287185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/185/GCA_001287185.1_bcg_Glaxo	-	Glaxo
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.13798	69.2	-	LMVT01	597	4968	4503	4/4/16	4/5/17	Contig	Robert Koch Institute	SAMN04229402	GCA_001610265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/265/GCA_001610265.1_ASM161026v1	-	MAHE-22-1
Lactococcus lactis subsp. lactis	1360	PRJNA294255	294255	Terrabacteria group	Firmicutes	2.43558	34.8	-	LKLP01	133	2480	2049	12/4/15	4/4/17	Contig	Radboudumc	SAMN04026635	GCA_001456625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/625/GCA_001456625.1_ASM145662v1	-	LMG8520
Bacillus cereus Rock3-42	526985	PRJNA29681	29681	Terrabacteria group	Firmicutes	5.2029	35.2	chromosome:NZ_CM000732.1/CM000732.1	ACMK01	1	11044	10507	4/30/09	6/15/17	Chromosome	Naval Medical Research Center	SAMN00727712	GCA_000161235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/235/GCA_000161235.1_ASM16123v1	22645259	Rock3-42
Staphylococcus epidermidis NIHLM087	979201	PRJNA62349	62349	Terrabacteria group	Firmicutes	2.48999	32.1	-	AKGK01	72	2483	2316	7/9/12	3/23/17	Contig	NISC - NIH Intramural Sequencing Center	SAMN00991849	GCA_000276505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/505/GCA_000276505.1_ASM27650v1	-	NIHLM087
Bacillus cereus	1396	PRJNA261557	261557	Terrabacteria group	Firmicutes	5.34962	35.3	chromosome:NZ_CP009686.1/CP009686.1	-	1	5641	5313	4/22/15	3/26/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN03140101	GCA_000978375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/978/375/GCA_000978375.1_ASM97837v1	26566422	FORC_005
Yersinia pestis subsp. microtus bv. Altaica	385967	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.5953	47.5	-	LIZA01	229	4317	3897	9/21/15	4/11/17	Scaffold	SRCAMB	SAMN03861486	GCA_001295115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/115/GCA_001295115.1_ASM129511v1	26634751	SCPM-O-B-7075
Pseudomonas fluorescens	294	PRJNA283447	283447	Proteobacteria	Gammaproteobacteria	4.8399	58.6	-	LCYV01	58	4485	4309	6/5/15	4/3/17	Contig	"University of Michigan, Ann Arbor"	SAMN03650288	GCA_001020785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/785/GCA_001020785.1_ASM102078v1	-	AU11122
Streptococcus agalactiae ILRI112	1318615	PRJEB1774	205643	Terrabacteria group	Firmicutes	2.0292	35.3	chromosome I:HF952106.1	-	1	2173	2073	5/28/13	6/25/14	Complete Genome	SLU-GBC	SAMEA2272025	GCA_000427055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/055/GCA_000427055.1_ILRI112	-	ILRI112
Nonlabens dokdonensis DSW-6	592029	PRJNA33015	33015	FCB group	Bacteroidetes/Chlorobi group	3.91463	35.3	chromosome:NC_020156.1/CP001397.1	-	1	3482	3374	1/18/13	4/17/17	Complete Genome	Korea Research Institute of Bioscience and Biotechnology	SAMN02603479	GCA_000332115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/115/GCA_000332115.1_ASM33211v1	23292138	DSW-6
Mycoplasma haemocanis str. Illinois	1111676	PRJNA76583	76583	Terrabacteria group	Tenericutes	0.919992	35.3	chromosome:NC_016638.1/CP003199.1	-	1	1182	1130	12/20/11	8/24/15	Complete Genome	Purdue University	SAMN02603733	GCA_000238995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/995/GCA_000238995.1_ASM23899v1	22374945	Illinois
Sulfolobus islandicus REY15A	930945	PRJNA60485	60485	TACK group	Crenarchaeota	2.52299	35.3	chromosome:NC_017276.1/CP002425.1	-	1	2775	2540	2/16/11	5/19/17	Complete Genome	"State Key Laboratory of Microbial Resources, Institute of Microbiology, CAS, Beijing, P. R. China"	SAMN02603882	GCA_000189555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/555/GCA_000189555.1_ASM18955v1	21278296	REY15A
Bacillus cereus B4264	405532	PRJNA17731	17731	Terrabacteria group	Firmicutes	5.41904	35.3	chromosome:NC_011725.1/CP001176.1	-	1	5690	5360	12/17/08	5/18/17	Complete Genome	TIGR	SAMN02604059	GCA_000021205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/205/GCA_000021205.1_ASM2120v1	-	B4264
Lachnoclostridium phytofermentans ISDg	357809	PRJNA16184	16184	Terrabacteria group	Firmicutes	4.84759	35.3	chromosome:NC_010001.1/CP000885.1	-	1	4100	3952	11/19/07	8/28/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598360	GCA_000018685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/685/GCA_000018685.1_ASM1868v1	-	ISDg
Pseudomonas fluorescens	294	PRJNA283453	283453	Proteobacteria	Gammaproteobacteria	4.89602	58.8	-	LCYZ01	35	4514	4352	6/5/15	4/3/17	Contig	"University of Michigan, Ann Arbor"	SAMN03650293	GCA_001020795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/795/GCA_001020795.1_ASM102079v1	-	AU12597
Yersinia pestis subsp. microtus bv. Talassica	385968	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.56559	47.6	-	LIYT01	207	4295	3953	9/21/15	3/26/17	Scaffold	SRCAMB	SAMN03839879	GCA_001295145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/145/GCA_001295145.1_ASM129514v1	26634751	SCPM-O-B-7074
Caldicellulosiruptor saccharolyticus DSM 8903	351627	PRJNA13466	13466	Terrabacteria group	Firmicutes	2.97027	35.3	chromosome:NC_009437.1/CP000679.1	-	1	2854	2631	4/19/07	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN00623033	GCA_000016545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/545/GCA_000016545.1_ASM1654v1	18776029	DSM 8903
Staphylococcus epidermidis NIHLM095	979199	PRJNA62345	62345	Terrabacteria group	Firmicutes	2.47615	32.1	-	AKGI01	39	2464	2262	7/9/12	3/23/17	Contig	NISC - NIH Intramural Sequencing Center	SAMN00991838	GCA_000276545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/545/GCA_000276545.1_ASM27654v1	-	NIHLM095
Bacillus cereus Rock3-44	526986	PRJNA29683	29683	Terrabacteria group	Firmicutes	4.9998	36.7505	chromosome:NZ_CM000733.1/CM000733.1	ACML01	1	10423	9354	4/30/09	6/15/17	Chromosome	Naval Medical Research Center	SAMN00727713	GCA_000161255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/255/GCA_000161255.1_ASM16125v1	22645259	Rock3-44
Lactococcus lactis subsp. lactis	1360	PRJNA294255	294255	Terrabacteria group	Firmicutes	2.47749	34.8	-	LKLQ01	48	2451	2297	12/4/15	4/4/17	Contig	Radboudumc	SAMN04026636	GCA_001456655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/655/GCA_001456655.1_ASM145665v1	-	LMG8526
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.05014	69.3	-	LNAH01	175	4786	4551	4/4/16	4/5/17	Contig	Robert Koch Institute	SAMN04229404	GCA_001610315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/315/GCA_001610315.1_ASM161031v1	-	MAH-E-61-1t
Mycobacterium bovis BCG	33892	PRJEB8560	294541	Terrabacteria group	Actinobacteria	4.33712	65.6	-	CUWO01	1	4216	4002	9/1/15	4/4/17	Scaffold	KAUST	SAMEA3257674	GCA_001287205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/205/GCA_001287205.1_bcg_Russia	-	Russia
Haemophilus influenzae	727	PRJNA360670	360670	Proteobacteria	Gammaproteobacteria	1.83866	38	-	MTBH01	140	1882	1656	1/31/17	3/29/17	Contig	Istituto Superiore di Sanita'	SAMN06214496	GCA_001975845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/845/GCA_001975845.1_ASM197584v1	-	hi467
Mycobacterium tuberculosis	1773	PRJNA196391	196391	Terrabacteria group	Actinobacteria	4.39286	64.8	chromosome:NZ_CP010895.1/CP010895.1	-	1	4222	3951	2/25/15	3/11/17	Chromosome	Universiti Teknologi MARA	SAMN03290698	GCA_000934585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/585/GCA_000934585.1_ASM93458v1	26981383	PR08
Lactobacillus gasseri ATCC 33323 = JCM 1131	324831	PRJNA84	84	Terrabacteria group	Firmicutes	1.89436	35.3	chromosome:NC_008530.1/CP000413.1	-	1	1891	1754	10/13/06	3/29/17	Complete Genome	"US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc."	SAMN02598542	GCA_000014425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/425/GCA_000014425.1_ASM1442v1	17030793	ATCC 33323
Streptococcus pneumoniae MNZ14	1315308	PRJNA196247	196247	Terrabacteria group	Firmicutes	2.13181	39.6	-	ASJO01	72	2284	2012	6/12/13	3/9/17	Scaffold	University of Mississippi medical center	SAMN02471898	GCA_000411735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/735/GCA_000411735.1_ASM41173v1	23887920	MNZ14
Lactococcus lactis subsp. lactis Il1403	272623	PRJNA72	72	Terrabacteria group	Firmicutes	2.36559	35.3	chromosome:NC_002662.1/AE005176.1	-	1	2406	2277	1/9/01	8/3/16	Complete Genome	INRA	SAMN02603339	GCA_000006865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/006/865/GCA_000006865.1_ASM686v1	11337471	IL1403
Lactococcus lactis subsp. lactis	1360	PRJNA320705	320705	Terrabacteria group	Firmicutes	2.33776	35.2989	chromosome:CP015898.1; plasmid pC10A:CP016703.1	-	2	2384	2298	4/4/17	4/4/17	Complete Genome	University College Cork	SAMN04956267	GCA_002078455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/455/GCA_002078455.1_ASM207845v1	-	C10
Streptococcus pyogenes ABC020052558	1439220	PRJNA233290	233290	Terrabacteria group	Firmicutes	1.90274	38.6	-	JJFC01	4	1994	1862	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567639	GCA_000629665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/665/GCA_000629665.1_Stre_pyog_ABC020052558_V1	-	ABC020052558
Leptospira interrogans serovar Copenhageni str. Fiocruz LV3409	1291345	PRJNA189013	189013	Spirochaetes	Spirochaetia	4.60219	35	-	AOVD01	140	4123	3759	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920632	GCA_000342705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/705/GCA_000342705.1_CA_glsol153	-	Fiocruz LV3409
Pseudomonas putida	303	PRJNA287355	287355	Proteobacteria	Gammaproteobacteria	6.0599	61.6	-	LFYQ01	55	5683	5455	7/13/15	4/3/17	Scaffold	universidad andres bello	SAMN03839260	GCA_001077495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/495/GCA_001077495.1_ASM107749v1	26294632	H
Bacillus anthracis str. A0465	486620	PRJNA27919	27919	Terrabacteria group	Firmicutes	5.40715	35.2	-	ABLH01	57	6039	5575	3/21/08	5/18/17	Scaffold	Los Alamos National Laboratory	SAMN02470255	GCA_000181995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/181/995/GCA_000181995.1_ASM18199v1	-	A0465
Shigella flexneri	623	PRJNA315925	315925	Proteobacteria	Gammaproteobacteria	4.66932	50.5	-	LVIT01	511	5357	4293	5/20/16	8/8/17	Contig	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04570187	GCA_001649095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/095/GCA_001649095.1_ASM164909v1	-	HN4s05
Bifidobacterium longum	216816	PRJEB16393	349303	Terrabacteria group	Actinobacteria	2.44902	60.3	-	FNRW01	6	2141	1945	10/22/16	4/5/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04489748	GCA_900104835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/835/GCA_900104835.1_IMG-taxon_2634166334_annotated_assembly	-	DSM 20219
Clostridium aceticum	84022	PRJNA263904	263904	Terrabacteria group	Firmicutes	4.20704	35.2951	chromosome:NZ_CP009687.1/CP009687.1; plasmid CACET_5p:NZ_CP009688.1/CP009688.1	-	2	3885	3734	6/12/15	4/10/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN03768360	GCA_001042715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/715/GCA_001042715.1_ASM104271v1	26184942	DSM 1496
Bacillus cereus	1396	PRJNA238206	238206	Terrabacteria group	Firmicutes	5.69776	35.2951	chromosome:NZ_CP009369.1/CP009369.1; plasmid unnamed:NZ_CP009368.1/CP009368.1	-	2	6040	5642	2/5/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03010436	GCA_000832525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/525/GCA_000832525.1_ASM83252v1	25931591	FM1
Streptococcus agalactiae	1311	PRJNA254645	254645	Terrabacteria group	Firmicutes	2.19274	35.3	-	LRQN01	31	2245	2137	2/2/16	3/19/17	Scaffold	The Genome Institute at Washington University	SAMN03950348	GCA_001546715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/715/GCA_001546715.1_ASM154671v1	-	PSS_7632b
Streptococcus suis RC1	1214152	PRJNA171441	171441	Terrabacteria group	Firmicutes	2.19643	41	-	ALLT01	59	2229	2069	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469504	GCA_000440815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/815/GCA_000440815.1_version1	-	RC1
Pseudomonas syringae pv. actinidiae ICMP 19098	1194422	PRJNA167416	167416	Proteobacteria	Gammaproteobacteria	6.30819	58.7	-	AOKE01	315	5924	5499	7/1/13	4/10/17	Contig	The New Zealand Institute for Plant & Food Research Limited	SAMN02470806	GCA_000416545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/545/GCA_000416545.1_ASM41654v1	-	ICMP 19098
Vibrio vulnificus	672	PRJNA355116	355116	Proteobacteria	Gammaproteobacteria	4.93627	46.6	-	NOJE01	153	4663	4401	8/30/17	9/1/17	Contig	FDA	SAMN06062371	GCA_002278535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/535/GCA_002278535.1_ASM227853v1	-	WAPHLVBRA00004
Bacillus licheniformis	1402	PRJEB16989	351124	Terrabacteria group	Firmicutes	4.08406	46.2	-	FOFE01	23	4244	4036	10/29/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487883	GCA_900110715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/715/GCA_900110715.1_IMG-taxon_2623620452_annotated_assembly	-	VTM3R78
Legionella pneumophila subsp. pneumophila	91891	PRJNA239272	239272	Proteobacteria	Gammaproteobacteria	3.3104	38.2	-	JFIA01	67	3006	2841	3/7/14	3/24/17	Scaffold	Beijing Institute of Microbiology and Epidemiology	SAMN02650979	GCA_000586075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/075/GCA_000586075.1_ATCC_43736	-	ATCC 43736
Shigella sonnei	624	PRJNA294946	294946	Proteobacteria	Gammaproteobacteria	4.73219	50.8	-	LJOH01	449	5579	4417	11/13/15	2/25/17	Contig	LAU	SAMN04046579	GCA_001443165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/443/165/GCA_001443165.1_ASM144316v1	-	SSGM5126
Bacteroides fragilis str. 3783N1-6	1339310	PRJNA206153	206153	FCB group	Bacteroidetes/Chlorobi group	5.43016	43.3	-	JGEU01	57	4884	4591	3/20/14	4/4/17	Contig	IGS	SAMN02314528	GCA_000599065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/065/GCA_000599065.2_ASM59906v2	-	3783N1-6
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.20524	38.5	-	NGPM01	109	2238	2017	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848392	GCA_002253835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/835/GCA_002253835.1_ASM225383v1	-	114g
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.71556	67	-	MUQD01	127	7356	6960	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001811	GCA_001991565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/565/GCA_001991565.1_ASM199156v1	-	VC6906
Lactococcus lactis subsp. lactis	1360	PRJNA320724	320724	Terrabacteria group	Firmicutes	2.45922	35.2949	chromosome:NZ_CP015908.1/CP015908.1; plasmid pUL8A:NZ_CP016704.1/CP016704.1; plasmid pUL8B:NZ_CP016705.1/CP016705.1; plasmid pUL8C:NZ_CP016706.1/CP016706.1	-	4	2542	2346	4/4/17	4/10/17	Complete Genome	University College Cork	SAMN04956402	GCA_002078855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/855/GCA_002078855.1_ASM207885v1	28356072	UL8
Bacillus cereus 03BB102	572264	PRJNA236041	236041	Terrabacteria group	Firmicutes	5.44811	35.2945	chromosome:NZ_CP009318.1/CP009318.1; plasmid unnamed:NZ_CP009317.1/CP009317.1	-	2	5906	5537	2/5/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03010434	GCA_000832405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/405/GCA_000832405.1_ASM83240v1	25931591	03BB102
Bacillus thuringiensis serovar israelensis	1430	PRJNA238495	238495	Terrabacteria group	Firmicutes	5.04044	35.3	-	JEOC01	51	5405	5119	3/6/14	4/2/17	Contig	KRIBB	SAMN02645569	GCA_000585975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/975/GCA_000585975.1_Bti4Q7_01	24699954	4Q7
Ralstonia solanacearum UW551	342110	PRJNA15601	15601	Proteobacteria	Betaproteobacteria	5.89532	65	-	AAKL01	577	4922	4521	12/19/05	5/19/17	Scaffold	University of Florida	SAMN02471768	GCA_000167955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/955/GCA_000167955.1_ASM16795v1	16404955	UW551
Vibrio cholerae HC-42A1	991963	PRJNA63933	63933	Proteobacteria	Gammaproteobacteria	4.02478	47.5	-	ALDO01	106	3823	3624	7/18/12	3/23/17	Scaffold	Institute for Genome Sciences	SAMN00622038	GCA_000279185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/185/GCA_000279185.1_ASM27918v1	-	HC-42A1
Clostridioides difficile CD17	1151256	PRJNA85685	85685	Terrabacteria group	Firmicutes	4.15839	28.3	-	AVGM01	191	3935	3716	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766595	GCA_000448725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/725/GCA_000448725.2_ASM44872v2	-	CD17
Shigella boydii	621	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.77414	50.7	-	JVJU01	143	4936	4636	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03197560	GCA_001064675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/675/GCA_001064675.1_ASM106467v1	26230489	37_SBOY
Francisella tularensis subsp. tularensis 3571	1292388	PRJNA189041	189041	Proteobacteria	Gammaproteobacteria	1.81693	32.3	-	AOUD01	26	1878	1583	3/14/13	4/1/17	Contig	Dugway Proving Ground	SAMN02469753	GCA_000346525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/525/GCA_000346525.1_H642_1.0	-	3571
Brucella abortus 78/14	1169213	PRJNA173526	173526	Proteobacteria	Alphaproteobacteria	3.28805	57.2	-	AQJE01	5	3359	3123	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00839723	GCA_000370185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/185/GCA_000370185.1_Bruc_abor_78_14_V1	-	78/14
Xanthomonas citri pv. glycines str. 12-2	1150615	PRJNA84287	84287	Proteobacteria	Gammaproteobacteria	5.26587	64.4	-	AJJO01	465	5024	4339	4/23/12	6/15/17	Contig	Kasetsart University	SAMN02470120	GCA_000259445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/445/GCA_000259445.1_Xag	-	2-Dec
Campylobacter fetus subsp. fetus	32019	PRJEB12566	312809	Proteobacteria	delta/epsilon subdivisions	2.0987	33.6	-	FIZP01	42	1939	1856	2/20/16	4/10/17	Scaffold	WTSI	SAMEA3295461	GCA_900063025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/025/GCA_900063025.1_16473_4_69	-	RC20
Xanthomonas oryzae pv. oryzae	64187	PRJNA269437	269437	Proteobacteria	Gammaproteobacteria	4.27596	64	-	JXFH01	478	4227	3390	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252529	GCA_001927925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/925/GCA_001927925.1_ASM192792v1	-	DXO-242
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.98339	38	-	MLLD01	337	2103	1813	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297017	GCA_001867535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/535/GCA_001867535.1_ASM186753v1	27118061	AWRIB130
Streptococcus mitis	28037	PRJNA308845	308845	Terrabacteria group	Firmicutes	1.84066	40.3	-	LROT01	44	2001	1966	3/11/16	3/11/16	Contig	University of Kaiserslautern	SAMN04432941	GCA_001588625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/625/GCA_001588625.1_ASM158862v1	-	10712
Vibrio parahaemolyticus	670	PRJNA288141	288141	Proteobacteria	Gammaproteobacteria	5.14778	45.1	-	LIRQ01	81	4982	4702	9/9/15	3/26/17	Scaffold	Health Canada	SAMN03799840	GCA_001280655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/655/GCA_001280655.1_ASM128065v1	-	S372-5
Bacillus subtilis subsp. subtilis str. 168	224308	PRJNA368652	368652	Terrabacteria group	Firmicutes	4.2154	43.5	chromosome:NZ_CP019662.1/CP019662.1	-	1	4419	4247	2/28/17	3/8/17	Chromosome	Georg-August-University Goettingen	SAMN06268574	GCA_002009095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/095/GCA_002009095.1_ASM200909v1	-	168
Bacillus cereus 03BB102	572264	PRJNA31307	31307	Terrabacteria group	Firmicutes	5.44931	35.2945	chromosome:NC_012472.1/CP001407.1; plasmid p03BB102_179:NC_012473.1/CP001406.1	-	2	5909	5554	3/30/09	5/18/17	Complete Genome	The J. Craig Venter Institute	SAMN02603930	GCA_000022505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/505/GCA_000022505.1_ASM2250v1	-	03BB102
Clostridium botulinum A2B7 92	1379738	PRJNA213606	213606	Terrabacteria group	Firmicutes	4.05781	27.9457	plasmid A2B7_92:NZ_AUZA01000014.1/AUZA01000014.1	AUZA01	14	3852	3646	6/24/14	3/24/17	Contig	Army Medical and Veterinary Research Center	SAMN02869851	GCA_000711005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/005/GCA_000711005.1_A2B7_92	26341861	A2B7 92
Enterococcus faecalis TX1322	525278	PRJNA31461	31461	Terrabacteria group	Firmicutes	2.97429	37.5	-	ACGM01	40	3014	2847	2/18/09	6/15/17	Scaffold	Baylor College of Medicine	SAMN00001498	GCA_000159275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/275/GCA_000159275.1_ASM15927v1	-	TX1322
Streptococcus mutans TCI-289	1074183	PRJNA72105	72105	Terrabacteria group	Firmicutes	1.7982	37	-	AGMJ01	140	1834	1713	10/6/11	3/22/17	Contig	JCVI	SAMN02436611	GCA_000229885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/885/GCA_000229885.2_SMUT7-NEX_12-289	-	TCI-289
Neisseria gonorrhoeae MU_NG14	1351806	PRJNA209639	209639	Proteobacteria	Betaproteobacteria	2.09248	52.4	-	ATRD01	342	2377	2122	6/10/15	3/26/17	Contig	"Read Laboratory, Emory University"	SAMN02338831	GCA_001026465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/465/GCA_001026465.1_ASM102646v1	-	MU_NG14
Enterococcus faecium ERV26	1134824	PRJNA82037	82037	Terrabacteria group	Firmicutes	3.04091	38	-	AMAT01	243	3158	2976	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299499	GCA_000295115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/115/GCA_000295115.2_ASM29511v2	-	ERV26
Stenotrophomonas maltophilia	40324	PRJNA308060	308060	Proteobacteria	Gammaproteobacteria	4.75292	66.6	-	LQQS01	172	4361	4199	4/13/16	3/28/17	Contig	University of Malaya	SAMN04386403	GCA_001619675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/675/GCA_001619675.1_ASM161967v1	-	F2
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12959	41.2	-	CWBS01	80	2063	1887	6/24/15	3/26/17	Contig	SC	SAMEA1032822	GCA_001176145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/145/GCA_001176145.1_6903_5_81	-	EQUI0130
Pasteurella multocida subsp. multocida	44283	PRJNA300374	300374	Proteobacteria	Gammaproteobacteria	2.38616	40.1	-	LUDF01	39	2293	2193	6/20/16	4/5/17	Scaffold	Sichuan Agricultural University	SAMN04219602	GCA_001670555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/670/555/GCA_001670555.1_ASM167055v1	-	ATCC 2100
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.92858	46.7	-	JTIP01	131	2971	2722	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196633	GCA_001656715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/715/GCA_001656715.1_ASM165671v1	-	Lrh15
Brucella melitensis bv. 3 str. Ether	520466	PRJNA33569	33569	Proteobacteria	Alphaproteobacteria	3.30879	57.2	-	ACEI01	13	3351	3072	2/18/09	3/30/17	Scaffold	Broad Institute	SAMN02595290	GCA_000158735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/735/GCA_000158735.1_ASM15873v1	-	Ether
Bacillus thuringiensis YBT-1518	529122	PRJNA63189	63189	Terrabacteria group	Firmicutes	6.67292	35.2915	chromosome:NC_022873.1/CP005935.1; plasmid pBMB0228:NC_020124.1/CP002486.1; plasmid pBMB0229:NC_022874.1/CP005936.1; plasmid pBMB0230:NC_022875.1/CP005937.1; plasmid pBMB0231:NC_022876.1/CP005938.1; plasmid pBMB0232:NC_022877.1/CP005939.1; plasmid pBMB0233:NC_022882.1/CP005940.1	-	7	7086	6381	11/19/13	4/2/17	Complete Genome	"State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University"	SAMN02641488	GCA_000497525.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/525/GCA_000497525.2_ASM49752v2	-	YBT-1518
Lactococcus lactis subsp. lactis	1360	PRJNA320718	320718	Terrabacteria group	Firmicutes	2.60767	35.2914	chromosome:NZ_CP015906.1/CP015906.1; plasmid pUC77A:NZ_CP016713.1/CP016713.1; plasmid pUC77B:NZ_CP016714.1/CP016714.1	-	3	2735	2538	4/4/17	4/10/17	Complete Genome	University College Cork	SAMN04956303	GCA_002078615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/615/GCA_002078615.1_ASM207861v1	28356072	UC77
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.43556	53.6	-	NDHK01	36	2358	2172	4/28/17	5/3/17	Contig	Institute for Medical Research	SAMN06311220	GCA_002115085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/085/GCA_002115085.1_ASM211508v1	-	rz658
Mycoplasma pneumoniae	2104	PRJNA291007	291007	Terrabacteria group	Tenericutes	0.820097	40	-	LHPV01	14	803	678	9/22/15	4/10/17	Scaffold	Centre for genomic regulation (CRG)	SAMN03897306	GCA_001296605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/605/GCA_001296605.1_ASM129660v1	26335586	Mympn_4318
Yersinia enterocolitica	630	PRJEB13626	384942	Proteobacteria	Gammaproteobacteria	4.40593	47	-	FKKO01	149	4191	3881	5/1/17	5/9/17	Contig	IP	SAMEA3935400	GCA_900079895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/895/GCA_900079895.1_IP35474	-	-
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.1062	60.2	-	JUWH01	125	4734	4630	7/10/15	3/26/17	Contig	University of Washington	SAMN03197911	GCA_001067015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/015/GCA_001067015.1_ASM106701v1	26230489	706_SMAR
Lactobacillus plantarum	1590	PRJNA271052	271052	Terrabacteria group	Firmicutes	3.37146	44.3	-	JXAX01	47	3322	3058	1/30/15	3/25/17	Contig	Vavilov Institute of General Genetics	SAMN03272560	GCA_000830535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/535/GCA_000830535.1_ASM83053v1	25883284	90sk
Mannheimia haemolytica	75985	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.65531	41	-	LQFW01	111	2746	2591	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366570	GCA_001931345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/345/GCA_001931345.1_ASM193134v1	-	3369MH
Campylobacter coli LMG 9860	887308	PRJNA52753	52753	Proteobacteria	delta/epsilon subdivisions	1.85148	31	-	AINS01	187	1970	1857	3/16/12	3/15/17	Contig	Cornell University	SAMN02428959	GCA_000254135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/135/GCA_000254135.2_ASM25413v2	-	LMG 9860
Burkholderia sp. MSMB0856	1637869	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.93869	66.7	-	LOXY01	66	6374	6083	1/21/16	4/11/17	Contig	Northern Arizona University	SAMN03449281	GCA_001524645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/645/GCA_001524645.1_ASM152464v1	-	MSMB0856
Propionibacterium acnes HL072PA2	765075	PRJNA49181	49181	Terrabacteria group	Actinobacteria	2.52395	60.1	-	ADXR01	31	2554	2409	8/5/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189235	GCA_000145335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/335/GCA_000145335.1_ASM14533v1	-	HL072PA2
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.45725	32.6	-	CUGA01	71	2414	2288	3/31/15	3/26/17	Contig	SC	SAMEA1035040	GCA_001234545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/545/GCA_001234545.1_7068_7_33	-	133319
Proteus mirabilis	584	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.93791	38.6	-	JUYT01	157	3640	3485	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197847	GCA_001077105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/105/GCA_001077105.1_ASM107710v1	26230489	646_PMIR
Enterobacter cloacae	550	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.04612	55.4	-	JTBN01	4	5013	4589	11/14/14	7/6/17	Contig	US Food and Drug Administration 	SAMN02934520	GCA_000783835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/835/GCA_000783835.1_ASM78383v1	-	FDAARGOS_69
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.95786	56	-	FKZD01	37	5776	5532	5/19/16	2/21/17	Scaffold	SC	SAMEA2273728	GCA_900083805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/805/GCA_900083805.1_11983_8_73	-	2880STDY5682653
Cronobacter sakazakii	28141	PRJNA329459	329459	Proteobacteria	Gammaproteobacteria	4.35649	57.2	-	MBRT01	582	4270	3970	4/17/17	4/21/17	Contig	Guangdong Institute of Microbiology	SAMN05412992	GCA_002094555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/555/GCA_002094555.1_ASM209455v1	28057934	cro711B3
Lactobacillus salivarius	1624	PRJNA357984	357984	Terrabacteria group	Firmicutes	2.02558	32.7	-	NBEV01	89	2076	1950	4/5/17	4/8/17	Scaffold	University College Cork	SAMN06163252	GCA_002079785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/785/GCA_002079785.1_ASM207978v1	-	AH43348
Mycobacterium abscessus 5S-1215	1001734	PRJNA65197	65197	Terrabacteria group	Actinobacteria	5.2063	64	-	AKUD01	5	5317	5155	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00672658	GCA_000271045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/045/GCA_000271045.1_ASM27104v1	-	5S-1215
Vibrio sp. V18_P1S4T112	1938671	PRJNA361511	361511	Proteobacteria	Gammaproteobacteria	3.84698	44.7	-	NDIL01	140	3612	3418	8/4/17	8/6/17	Scaffold	Instituto de ecologia	SAMN06251412	GCA_002241365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/365/GCA_002241365.1_ASM224136v1	-	V18_P1S4T112
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.27629	63	-	DCFM01	104	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06453206	GCA_002315125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/125/GCA_002315125.1_ASM231512v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.05743	67.1	-	LPBF01	227	7442	6982	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449368	GCA_001526985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/985/GCA_001526985.1_ASM152698v1	-	MSMB1803WGS
Streptococcus oralis SK313	1035190	PRJNA67193	67193	Terrabacteria group	Firmicutes	1.88881	41.4	-	AFUU01	5	2093	2022	8/10/11	9/20/13	Contig	J. Craig Venter Institute	SAMN00621710	GCA_000223235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/223/235/GCA_000223235.2_ASM22323v2	-	SK313
Pseudoalteromonas sp. H103	1761893	PRJNA209414	209414	Proteobacteria	Gammaproteobacteria	4.41643	39.4	-	LOFG01	21	3952	3801	12/17/15	4/11/17	Scaffold	University of Arizona	SAMN04293675	GCA_001469205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/205/GCA_001469205.1_ASM146920v1	26868390	H103
Corynebacterium pseudotuberculosis	1719	PRJNA353915	353915	Terrabacteria group	Actinobacteria	2.32043	52.2	chromosome:NZ_CP019289.1/CP019289.1	-	1	2131	1857	1/23/17	4/10/17	Chromosome	Federal University of Para	SAMN06028554	GCA_001969485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/485/GCA_001969485.1_ASM196948v1	-	PA06
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	3.92	38.7	-	MDIH01	80	3819	3639	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022867	GCA_001706215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/215/GCA_001706215.1_ASM170621v1	-	UKK-0544
Citrobacter freundii	546	PRJNA335395	335395	Proteobacteria	Gammaproteobacteria	5.30295	51.9	-	MCOO01	214	5313	5046	11/17/16	4/5/17	Contig	Hospital Universitary 12 de octubre	SAMN05441416	GCA_001880845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/845/GCA_001880845.1_ASM188084v1	-	CF7_ST91
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.07923	55.1	-	LAAT01	79	5069	4820	3/19/15	3/25/17	Contig	JCVI	SAMN03283321	GCA_000957545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/545/GCA_000957545.1_ASM95754v1	-	32594
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.23869	54.9	-	LDCA01	58	5179	4927	5/21/15	4/6/17	Contig	JCVI	SAMN03495963	GCA_001011815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/815/GCA_001011815.1_ASM101181v1	-	GN05253
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.10408	64	-	FVDS01	56	5076	4856	3/10/17	3/18/17	Scaffold	SC	SAMEA2259555	GCA_900131455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/455/GCA_900131455.1_11861_7_18	-	750
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.38286	66.8	-	LPFF01	81	7770	7410	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449479	GCA_001529825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/825/GCA_001529825.1_ASM152982v1	-	MSMB1383WGS
Pseudomonas sp. Leaf83	1736239	PRJNA297956	297956	Proteobacteria	Gammaproteobacteria	5.53883	62.4	-	LMMB01	39	5138	4954	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151619	GCA_001422075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/075/GCA_001422075.1_Leaf83	26633631	Leaf83
Streptomyces sp. CNH287	1288082	PRJNA187954	187954	Terrabacteria group	Actinobacteria	6.78852	72.7	-	AUKQ01	48	6179	5907	7/10/13	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441484	GCA_000424825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/825/GCA_000424825.1_ASM42482v1	-	CNH287
Bacillus sp. Soil745	1736396	PRJNA298127	298127	Terrabacteria group	Firmicutes	5.43374	40.5	-	LMSZ01	36	5223	4965	11/2/15	4/11/17	Scaffold	ETH Zurich	SAMN04155661	GCA_001429835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/835/GCA_001429835.1_Soil745	26633631	Soil745
Acinetobacter sp. WC-323	903918	PRJNA53435	53435	Proteobacteria	Gammaproteobacteria	4.0474	42.6	-	AMZS01	77	3934	3721	11/26/12	4/6/17	Contig	Walter Reed Army Institute of Research	SAMN00761241	GCA_000314615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/615/GCA_000314615.1_gacin30v1.0	-	WC-323
Clostridium sp. Bc-iso-3	1848158	PRJNA321112	321112	Terrabacteria group	Firmicutes	4.32714	38.2	-	LXSB01	4	3734	3519	8/31/16	4/13/17	Contig	Swedish University of Agricultural Sciences	SAMN04966136	GCA_001717745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/745/GCA_001717745.1_ASM171774v1	-	Bc-iso-3
Sphingomonas sp. Leaf343	1736345	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	3.60003	67.1	-	LMPG01	17	3364	3274	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151735	GCA_001423765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/765/GCA_001423765.1_Leaf343	26633631	Leaf343
Rhodococcus sp. 14-2686-1-2	2023145	PRJNA395383	395383	Terrabacteria group	Actinobacteria	6.20396	64.3	-	NPFS01	58	5855	5646	8/18/17	8/21/17	Contig	Oregon State University	SAMN07414576	GCA_002259285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/285/GCA_002259285.1_ASM225928v1	-	14-2686-1-2
Enterobacter sp. 5-4	1444288	PRJNA233558	233558	Proteobacteria	Gammaproteobacteria	4.62128	56.2	-	JFHW01	36	4432	4276	4/2/14	4/20/17	Contig	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN02592616	GCA_000612205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/205/GCA_000612205.1_EntSp1.0	-	4-May
Staphylococcus sp. HMSC063G01	1739412	PRJNA300062	300062	Terrabacteria group	Firmicutes	2.74997	32.6	-	LTWT01	79	2799	2669	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480071	GCA_001813355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/355/GCA_001813355.1_ASM181335v1	-	HMSC063G01
Corynebacterium sp. HMSC078A10	1739312	PRJNA299962	299962	Terrabacteria group	Actinobacteria	2.76182	60.8	-	LTFV01	53	2598	2438	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477624	GCA_001811565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/565/GCA_001811565.1_ASM181156v1	-	HMSC078A10
Arthrobacter sp. CAL618	1055770	PRJNA196899	196899	Terrabacteria group	Actinobacteria	3.65439	63.2	-	ASZW01	288	3509	3049	9/17/13	4/17/17	Scaffold	University of Florence	SAMN02471756	GCA_000468215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/215/GCA_000468215.1_ASM46821v1	24231161	CAL618
Bradyrhizobium sp. R5	1855320	PRJEB15724	347701	Proteobacteria	Alphaproteobacteria	9.44491	63.6	-	FMZW01	124	8887	8309	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216337	GCA_900101405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/405/GCA_900101405.1_IMG-taxon_2654588101_annotated_assembly	-	R5
Streptococcus sp. HMSC066F10	1739437	PRJNA300087	300087	Terrabacteria group	Firmicutes	1.92624	38.7	-	LTVZ01	58	1902	1717	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480364	GCA_001813805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/805/GCA_001813805.1_ASM181380v1	-	HMSC066F10
Mycobacterium sp. IS-1496	1772284	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.28617	69	-	LQIU01	76	5051	4878	1/6/16	4/11/17	Contig	JCVI	SAMN04349501	GCA_001499995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/995/GCA_001499995.1_ASM149999v1	-	IS-1496
Prevotella sp. CAG:1058	1262918	PRJEB682	206647	FCB group	Bacteroidetes/Chlorobi group	2.72091	48.1	-	CAWU01	161	2306	2264	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138546	GCA_000433175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/175/GCA_000433175.1_MGS1058	-	-
Enterococcus sp. 9E7_DIV0242	1834193	PRJNA313452	313452	Terrabacteria group	Firmicutes	4.64664	40.3	-	NGMM01	38	4196	3997	5/16/17	5/24/17	Scaffold	Broad Institute	SAMN04634087	GCA_002140975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/975/GCA_002140975.1_ASM214097v1	-	9E7_DIV0242
Paenibacillus sp. LC231	1120679	PRJNA235333	235333	Terrabacteria group	Firmicutes	7.38101	49.2	-	JFOM01	58	6690	6467	11/2/16	4/13/17	Contig	Michael G. DeGroote Institute For Infectious Disease Research	SAMN02715779	GCA_001860525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/525/GCA_001860525.1_ASM186052v1	27929110	LC231
Thioalkalivibrio sp. ALR17-21	1269813	PRJNA183370	183370	Proteobacteria	Gammaproteobacteria	2.99896	67.4	-	ATUL01	65	2886	2756	7/9/13	4/8/17	Contig	DOE Joint Genome Institute	SAMN02440568	GCA_000420185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/420/185/GCA_000420185.1_ASM42018v1	-	ALR17-21
Ruminococcus sp. UBA4335	1947426	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.19719	45.1	-	DGTN01	25	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452801	GCA_002393745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/745/GCA_002393745.1_ASM239374v1	28894102	-
Bacteroides sp. SM23_62_1	1703353	PRJNA270657	270657	FCB group	Bacteroidetes/Chlorobi group	4.74444	40.1	-	LJUQ01	305	3685	3378	9/30/15	9/30/15	Contig	University of Texas	SAMN03994210	GCA_001304505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/505/GCA_001304505.1_ASM130450v1	25922666	-
Prochlorococcus sp. scB245a_520D2	1471519	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.01984	31.4	-	JFNR01	290	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671390	GCA_000634495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/495/GCA_000634495.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. P0136	1895611	PRJNA341029	341029	Proteobacteria	delta/epsilon subdivisions	1.68765	33.5	-	MJKP01	21	1725	1641	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687049	GCA_002138785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/785/GCA_002138785.1_ASM213878v1	28854596	P0136
Microbacterium sp. HM58-2	1778770	PRJDB4493	319420	Terrabacteria group	Actinobacteria	3.79275	70.1	-	BDCY01	39	3539	3452	4/22/16	4/17/17	Scaffold	"Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture"	SAMD00045526	GCA_001639925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/925/GCA_001639925.1_Microbacterium_sp._strain_HM58-_2_assembly01	27313297	HM58-2
Rhizobium sp. R693	1764276	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.18483	59.7	-	LOKY01	49	6058	5730	6/29/17	7/1/17	Contig	Centro de Ciencias Genomicas UNAM	SAMN04304760	GCA_002211315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/315/GCA_002211315.1_ASM221131v1	-	R693
Mesorhizobium sp. NBIMC_P2-C2	1320557	PRJNA197278	197278	Proteobacteria	Alphaproteobacteria	5.53666	63.4	-	AVBO01	85	5291	5164	2/12/14	4/9/17	Contig	FDA	SAMN02951895	GCA_000568535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/535/GCA_000568535.1_NBIMC_P2-C2	24367538	NBIMC_P2-C2
Bacillus velezensis	492670	PRJNA353000	353000	Terrabacteria group	Firmicutes	3.88126	46.4	-	MPHE01	19	3876	3699	2/16/17	3/22/17	Contig	Institute of Biology Leiden	SAMN06007748	GCA_002002555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/555/GCA_002002555.1_ASM200255v1	-	CH13
Gilliamella apicola	1196095	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	3.06369	33.5	-	NASA01	99	2714	2590	5/16/17	5/23/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603547	GCA_002142265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/265/GCA_002142265.1_ASM214226v1	-	N-G5
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.79948	57	-	FXOG01	103	5894	5500	4/28/17	5/6/17	Scaffold	SC	SAMEA2609423	GCA_900181055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/055/GCA_900181055.1_14936_2_90	-	3189STDY5864944
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.82322	32.3	-	FQRR01	14	2831	2661	11/25/16	4/6/17	Contig	SC	SAMEA3449115	GCA_900128325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/325/GCA_900128325.1_17175_3_59	-	3688STDY6125113
Xanthomonas axonopodis pv. manihotis str. UA306	1185663	PRJNA163721	163721	Proteobacteria	Gammaproteobacteria	5.06523	65	-	AKEN01	144	4537	4231	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090344	GCA_000266825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/825/GCA_000266825.1_UA306	22699502	UA306
Xanthomonas axonopodis pv. manihotis str. UA324	1185665	PRJNA163725	163725	Proteobacteria	Gammaproteobacteria	4.91601	65.1	-	AKEP01	146	4383	4044	6/11/12	6/15/17	Contig	"University of California, Berkeley"	SAMN01090346	GCA_000266845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/266/845/GCA_000266845.1_UA324	22699502	UA324
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79462	32.3	-	FQRS01	14	2799	2626	11/25/16	4/6/17	Contig	SC	SAMEA3449116	GCA_900128335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/335/GCA_900128335.1_17175_3_60	-	3688STDY6125114
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.80488	57	-	FXOK01	108	5883	5507	4/28/17	5/6/17	Scaffold	SC	SAMEA2609429	GCA_900181065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/065/GCA_900181065.1_14936_2_92	-	3189STDY5864946
Gilliamella apicola	1196095	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.97405	33.7	-	NASB01	92	2666	2552	5/16/17	5/24/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603549	GCA_002142285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/285/GCA_002142285.1_ASM214228v1	-	N-22
Bacillus velezensis	492670	PRJNA343056	343056	Terrabacteria group	Firmicutes	3.95861	46.4	-	MLCV01	64	3897	3750	3/22/17	3/24/17	Contig	Universidad Autonoma de Zacatecas	SAMN05772828	GCA_002071595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/071/595/GCA_002071595.1_ASM207159v1	-	2A-2B
Mesorhizobium sp. NBIMC_P2-C3	1320556	PRJNA197279	197279	Proteobacteria	Alphaproteobacteria	5.5424	63.4	-	AVBP01	44	5281	5175	2/12/14	4/9/17	Contig	FDA	SAMN02951897	GCA_000568555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/555/GCA_000568555.1_NBIMC_P2-C3	24367538	NBIMC_P2-C3
Rhizobium sp. R711	1764277	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	5.79598	59.6	-	LOKZ01	39	5686	5364	6/29/17	7/1/17	Contig	Centro de Ciencias Genomicas UNAM	SAMN04304761	GCA_002211365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/365/GCA_002211365.1_ASM221136v1	-	R711
Microbacterium sp. LCT-H2	1914306	PRJNA350356	350356	Terrabacteria group	Actinobacteria	3.35623	70.2	-	MODW01	30	3256	3162	11/3/16	4/13/17	Scaffold	"Chinese PLA General Hospital, Chinese PLA Postgraduate Medical School"	SAMN05938536	GCA_001866135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/135/GCA_001866135.1_ASM186613v1	-	LCT-H2
Campylobacter sp. P0138	1895612	PRJNA341030	341030	Proteobacteria	delta/epsilon subdivisions	1.58617	33.5	-	MJKQ01	16	1624	1537	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687050	GCA_002138795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/795/GCA_002138795.1_ASM213879v1	28854596	P0138
Prochlorococcus sp. scB245a_520K10	1471522	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.45363	31.5	-	JFNU01	237	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671393	GCA_000634515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/515/GCA_000634515.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Bacteroides sp. 41_26	1896973	PRJNA321218	321218	FCB group	Bacteroidetes/Chlorobi group	3.1102	40.4	-	MNQM01	42	2316	2211	12/23/16	12/23/16	Scaffold	None	SAMN05717218	GCA_001915435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/435/GCA_001915435.1_ASM191543v1	27819664	-
Ruminococcus sp. UBA4321	1947425	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.78059	46.2	-	DGUB01	144	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450711	GCA_002393815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/815/GCA_002393815.1_ASM239381v1	28894102	-
Thioalkalivibrio sp. HK1	1469245	PRJNA238168	238168	Proteobacteria	Gammaproteobacteria	3.46016	58.3	-	JFBG01	114	3085	2937	2/28/14	4/9/17	Contig	Hong Kong University of Science and Technology	SAMN02641234	GCA_000583135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/135/GCA_000583135.1_work_bench_6.5_assembly_of_Candidatus_Thioalkalivibrio_spongium_HK1	-	HK1
Paenibacillus sp. NAIST15-1	1605994	PRJDB3476	344872	Terrabacteria group	Firmicutes	6.76828	46.3	-	BBYF01	42	6040	5803	9/28/16	4/24/17	Contig	Tokyo University of Agriculture	SAMD00030729	GCA_001894745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/745/GCA_001894745.1_ASM189474v1	27764113	NAIST15-1
Enterococcus sp. 12E11_DIV0728	1834168	PRJNA313452	313452	Terrabacteria group	Firmicutes	4.02295	42.4	-	NGLY01	17	3772	3575	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634064	GCA_002141085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/085/GCA_002141085.1_ASM214108v1	-	12E11_DIV0728
Prevotella sp. CAG:474	1262926	PRJEB897	206896	FCB group	Bacteroidetes/Chlorobi group	2.70326	52.7	-	CBGF01	91	2330	2297	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138582	GCA_000433895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/895/GCA_000433895.1_MGS474	-	-
Mycobacterium sp. IS-1590	1772286	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.38238	67.1	-	LQIW01	51	5192	5062	1/6/16	4/11/17	Contig	JCVI	SAMN04349503	GCA_001500025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/500/025/GCA_001500025.1_ASM150002v1	-	IS-1590
Streptococcus sp. HMSC057F04	1739453	PRJNA300103	300103	Terrabacteria group	Firmicutes	1.95324	35.2	-	LTVM01	38	1974	1870	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480375	GCA_001814045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/045/GCA_001814045.1_ASM181404v1	-	HMSC057F04
Bradyrhizobium sp. cf659	1761771	PRJEB17358	351553	Proteobacteria	Alphaproteobacteria	8.46502	64.5	-	FOQJ01	25	7968	7608	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487925	GCA_900113725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/725/GCA_900113725.1_IMG-taxon_2609459633_annotated_assembly	-	CF659
Arthrobacter sp. L77	1496689	PRJNA270909	270909	Terrabacteria group	Actinobacteria	3.60844	69.8	-	JWSU01	10	3333	3199	1/8/15	4/10/17	Scaffold	Indian Agricultural Research Institute	SAMN03271689	GCA_000816565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/565/GCA_000816565.1_ASM81656v1	-	L77
Corynebacterium sp. HMSC064E08	1739324	PRJNA299974	299974	Terrabacteria group	Actinobacteria	2.4361	58.9	-	LTFJ01	16	2134	2056	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477669	GCA_001811805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/805/GCA_001811805.1_ASM181180v1	-	HMSC064E08
Staphylococcus sp. HMSC066C03	1739414	PRJNA300064	300064	Terrabacteria group	Firmicutes	2.49867	32.7	-	LTWR01	69	2441	2283	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480347	GCA_001813405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/405/GCA_001813405.1_ASM181340v1	-	HMSC066C03
Enterobacter sp. T1-1	1449966	PRJNA235243	235243	Proteobacteria	Gammaproteobacteria	4.90325	55.1	-	JALW01	142	4708	4531	6/23/14	4/9/17	Contig	University of Malaya	SAMN02869885	GCA_000710795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/795/GCA_000710795.1_De_novo_Assembly	-	T1-1
Rhodococcus sp. 06-156-4	2023152	PRJNA395383	395383	Terrabacteria group	Actinobacteria	6.41186	64.4	-	NPGB01	39	5972	5840	8/18/17	8/21/17	Contig	Oregon State University	SAMN07414567	GCA_002259345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/345/GCA_002259345.1_ASM225934v1	-	06-156-4
Sphingomonas sp. Leaf357	1736350	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	3.87108	65.4	-	LMPM01	3	3670	3574	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151740	GCA_001423845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/845/GCA_001423845.1_Leaf357	26633631	Leaf357
Clostridium sp. BL-8	349938	PRJNA322813	322813	Terrabacteria group	Firmicutes	6.04594	29.9	-	LZZL01	231	5446	5237	2/23/17	2/25/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05170534	GCA_002006495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/495/GCA_002006495.1_ASM200649v1	-	BL-8
Acinetobacter sp. WC-136	903916	PRJNA53431	53431	Proteobacteria	Gammaproteobacteria	4.16624	38.8	-	AMST01	133	4126	3814	11/26/12	5/18/17	Contig	Walter Reed Army Institute of Research	SAMN00761240	GCA_000315155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/155/GCA_000315155.1_gacin28v1.0	-	WC-136
Bacillus sp. Soil768D1	1736405	PRJNA298127	298127	Terrabacteria group	Firmicutes	6.04305	37.8	-	LMTA01	100	5790	5452	11/2/15	4/11/17	Scaffold	ETH Zurich	SAMN04155670	GCA_001429855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/855/GCA_001429855.1_Soil768D1	26633631	Soil768D1
Streptomyces sp. TAA040	1288083	PRJNA187955	187955	Terrabacteria group	Actinobacteria	5.31181	72.5	-	AUKR01	74	4754	4349	7/10/13	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440678	GCA_000424845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/845/GCA_000424845.1_ASM42484v1	-	TAA040
Pseudomonas sp. Leaf127	1736267	PRJNA297956	297956	Proteobacteria	Gammaproteobacteria	6.37675	62.2	-	LMOA01	26	5708	5538	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151647	GCA_001423155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/155/GCA_001423155.1_Leaf127	26633631	Leaf127
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.48288	66.4	-	LPEM01	74	7923	7566	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449460	GCA_001529885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/885/GCA_001529885.1_ASM152988v1	-	MSMB1256WGS
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96634	64.1	-	FVDP01	15	4904	4741	3/10/17	3/18/17	Scaffold	SC	SAMEA2071360	GCA_900131565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/565/GCA_900131565.1_10665_4_13	-	268
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.20244	55	-	LDBZ01	56	5057	4800	5/21/15	4/6/17	Contig	JCVI	SAMN03495962	GCA_001011915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/915/GCA_001011915.1_ASM101191v1	-	GN05224
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.93902	55.2	-	LAAQ01	78	4893	4645	3/19/15	3/25/17	Contig	JCVI	SAMN03283305	GCA_000957565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/565/GCA_000957565.1_ASM95756v1	-	33813
Citrobacter freundii	546	PRJNA335558	335558	Proteobacteria	Gammaproteobacteria	5.65058	51.8	-	MDCX01	350	5805	5467	11/17/16	4/5/17	Contig	Hospital Universitary 12 de octubre	SAMN05447748	GCA_001880865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/865/GCA_001880865.1_ASM188086v1	-	CF_12_ST_92
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	4.02362	38.6	-	MDII01	104	3998	3798	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022868	GCA_001706225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/225/GCA_001706225.1_ASM170622v1	-	UKK-0545
Corynebacterium pseudotuberculosis	1719	PRJNA254111	254111	Terrabacteria group	Actinobacteria	2.37942	52.1	-	JPJB01	3	2195	2051	7/15/14	4/2/17	Contig	"Oslo University Hospital, Rikshopitalet"	SAMN02899790	GCA_000729725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/725/GCA_000729725.1_ASM72972v1	25189581	CCUG 27541
Pseudoalteromonas sp. H105	1348393	PRJNA209414	209414	Proteobacteria	Gammaproteobacteria	4.47374	40.3	-	LOFH01	26	4039	3840	12/17/15	4/11/17	Scaffold	University of Arizona	SAMN04293676	GCA_001469215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/215/GCA_001469215.1_ASM146921v1	26868390	H105
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.16528	67.4	-	LPBH01	99	6489	6148	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449370	GCA_001527015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/015/GCA_001527015.1_ASM152701v1	-	MSMB1806WGS
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.34955	64	-	DCLE01	61	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451772	GCA_002320895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/895/GCA_002320895.1_ASM232089v1	28894102	-
Vibrio sp. V19_P1S1T109	1938672	PRJNA361511	361511	Proteobacteria	Gammaproteobacteria	3.77792	44.9	-	NDIM01	381	3511	3281	8/4/17	8/6/17	Scaffold	Instituto de ecologia	SAMN06251413	GCA_002241375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/375/GCA_002241375.1_ASM224137v1	-	V19_P1S1T109
Mycobacterium abscessus 5S-0422	1001731	PRJNA65191	65191	Terrabacteria group	Actinobacteria	5.32397	64	-	AKTZ01	13	5451	5280	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00672653	GCA_000271065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/065/GCA_000271065.1_ASM27106v1	-	5S-0422
Lactobacillus salivarius	1624	PRJNA357984	357984	Terrabacteria group	Firmicutes	2.07367	32.9	-	NBEB01	187	2066	1914	4/5/17	4/8/17	Scaffold	University College Cork	SAMN06163272	GCA_002079795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/795/GCA_002079795.1_ASM207979v1	-	LMG 14477
Cronobacter sakazakii	28141	PRJNA329459	329459	Proteobacteria	Gammaproteobacteria	4.46383	57.3	-	MBRS01	415	4245	4049	4/17/17	4/21/17	Contig	Guangdong Institute of Microbiology	SAMN05412996	GCA_002094575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/575/GCA_002094575.1_ASM209457v1	28057934	cro910W
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.24124	54.8	-	FKZH01	60	6106	5834	5/19/16	2/25/17	Scaffold	SC	SAMEA2273761	GCA_900083815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/815/GCA_900083815.1_11983_8_93	-	2880STDY5682686
Enterobacter cloacae	550	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.64195	55.7	-	JTBO01	1	4439	4091	11/14/14	7/6/17	Contig	US Food and Drug Administration 	SAMN02934519	GCA_000783855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/855/GCA_000783855.1_ASM78385v1	-	FDAARGOS_68
Proteus mirabilis	584	PRJNA315499	315499	Proteobacteria	Gammaproteobacteria	4.05822	39	-	LWDB01	32	3795	3611	5/7/16	4/5/17	Scaffold	ICAR-National Institute of Veterinary Epidemiology and Disease Informatics	SAMN04563558	GCA_001640165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/165/GCA_001640165.1_ASM164016v1	-	NIVEDI3-PG74
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.49275	32.6	-	CUGJ01	99	2488	2358	3/31/15	4/21/17	Contig	SC	SAMEA1035078	GCA_001235305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/305/GCA_001235305.1_7068_7_41	-	137772
Propionibacterium acnes HL060PA1	765084	PRJNA49201	49201	Terrabacteria group	Actinobacteria	2.47629	60.1	-	ADYE01	14	2470	2258	8/5/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189230	GCA_000145355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/355/GCA_000145355.1_ASM14535v1	-	HL060PA1
Burkholderia sp. MSMB1072	1637871	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.02982	66.9	-	LOYC01	73	6622	6248	1/21/16	4/11/17	Contig	Northern Arizona University	SAMN03449285	GCA_001524725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/725/GCA_001524725.1_ASM152472v1	-	MSMB1072
Campylobacter coli H6	887309	PRJNA52755	52755	Proteobacteria	delta/epsilon subdivisions	1.56439	31.5	-	AINT01	122	1643	1553	3/16/12	3/15/17	Contig	Cornell University	SAMN02429064	GCA_000254155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/155/GCA_000254155.2_ASM25415v2	-	H6
Mannheimia haemolytica	75985	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.66423	41	-	LQFX01	77	2761	2606	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366571	GCA_001931365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/365/GCA_001931365.1_ASM193136v1	-	3384MH
Lactobacillus plantarum	1590	PRJNA263714	263714	Terrabacteria group	Firmicutes	3.23733	44.4	-	JSUW01	178	3134	2938	3/19/15	3/25/17	Contig	TIFN	SAMN03160619	GCA_000956195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/195/GCA_000956195.1_ASM95619v1	-	CIP104448
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.92062	59.6	-	JUOM01	185	4678	4544	7/10/15	3/26/17	Contig	University of Washington	SAMN03198114	GCA_001068085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/085/GCA_001068085.1_ASM106808v1	26230489	907_SMAR
Yersinia enterocolitica	630	PRJEB13626	384942	Proteobacteria	Gammaproteobacteria	4.4147	46.9	-	FKKR01	152	4176	3876	5/1/17	5/9/17	Contig	IP	SAMEA3935403	GCA_900079905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/905/GCA_900079905.1_IP35478	-	-
Mycoplasma pneumoniae	2104	PRJNA291007	291007	Terrabacteria group	Tenericutes	0.820773	40.1	-	LHPX01	10	803	707	9/22/15	4/4/17	Scaffold	Centre for genomic regulation (CRG)	SAMN03897308	GCA_001296615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/615/GCA_001296615.1_ASM129661v1	26335586	Mympn_4802
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.47388	53.5	-	NDHJ01	48	2408	2236	4/28/17	5/3/17	Contig	Institute for Medical Research	SAMN06311222	GCA_002115095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/095/GCA_002115095.1_ASM211509v1	-	rz693
Bordetella bronchiseptica 00-P-2730	1331198	PRJNA202110	202110	Proteobacteria	Betaproteobacteria	5.83141	67.7	-	JGWG01	296	5734	5659	5/1/14	6/2/15	Contig	JCVI	SAMN02231541	GCA_000662075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/075/GCA_000662075.1_gbb02v01	25908122	00-P-2730
Bacillus cereus	1396	PRJNA326984	326984	Terrabacteria group	Firmicutes	5.60074	35.2805	chromosome:NZ_CP016360.1/CP016360.1; plasmid pBCM1301:NZ_CP016361.1/CP016361.1; plasmid pBCM1302:NZ_CP016362.1/CP016362.1; plasmid pBCM1303:NZ_CP016363.1/CP016363.1	-	4	5933	5590	7/10/17	7/12/17	Complete Genome	Korea Food Research Institute	SAMN05300194	GCA_002216125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/125/GCA_002216125.1_ASM221612v1	-	M13
Brucella melitensis bv. 1 str. 16M	224914	PRJNA34747	34747	Proteobacteria	Alphaproteobacteria	3.29125	57.2	-	ACJL01	15	3351	3115	9/18/09	3/30/17	Scaffold	Broad Institute	SAMN02595311	GCA_000160295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/295/GCA_000160295.1_ASM16029v1	-	16M
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.89769	46.7	-	JTIT01	52	2920	2738	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196637	GCA_001656735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/735/GCA_001656735.1_ASM165673v1	-	Lrh11
Pasteurella multocida subsp. multocida	44283	PRJNA300369	300369	Proteobacteria	Gammaproteobacteria	2.30941	40.3	-	LUDB01	16	2179	2104	6/20/16	4/5/17	Scaffold	Sichuan Agricultural University	SAMN04219578	GCA_001670775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/670/775/GCA_001670775.1_ASM167077v1	-	ATCC 15742
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12748	41.2	-	CWFW01	79	2053	1878	6/23/15	3/26/17	Contig	SC	SAMEA1032823	GCA_001176165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/165/GCA_001176165.1_6817_1_70	-	EQUI0023
Stenotrophomonas maltophilia	40324	PRJNA277366	277366	Proteobacteria	Gammaproteobacteria	4.70277	66.9	-	JZTX01	2	4348	4162	8/26/15	3/28/17	Contig	Icahn School of Medicine at Mount Sinai	SAMN03389654	GCA_001651505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/505/GCA_001651505.1_ISMMS7v1	26324280	ISMMS7
Enterococcus faecium P1137	1134829	PRJNA82047	82047	Terrabacteria group	Firmicutes	2.74994	37.8	-	AMAO01	177	2823	2694	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299504	GCA_000295135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/135/GCA_000295135.2_ASM29513v2	-	P1137
Neisseria gonorrhoeae MU_NG18	1351809	PRJNA209642	209642	Proteobacteria	Betaproteobacteria	2.07406	52.6	-	ATRG01	336	2359	2125	6/10/15	3/26/17	Contig	"Read Laboratory, Emory University"	SAMN02338834	GCA_001026475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/475/GCA_001026475.1_ASM102647v1	-	MU_NG18
Streptococcus mutans TCI-292	1074184	PRJNA72107	72107	Terrabacteria group	Firmicutes	1.81088	37	-	AGMK01	137	1853	1738	10/6/11	3/22/17	Contig	JCVI	SAMN02436522	GCA_000229905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/905/GCA_000229905.2_SMUT7-NEX_21-292	-	TCI-292
Enterococcus faecalis ATCC 29200	525271	PRJNA31459	31459	Terrabacteria group	Firmicutes	2.97337	37.6	-	ACHK01	64	2978	2863	3/10/09	6/15/17	Scaffold	Baylor College of Medicine	SAMN00001464	GCA_000159655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/655/GCA_000159655.1_ASM15965v1	-	ATCC 29200
Clostridium botulinum A2 117	1378091	PRJNA213371	213371	Terrabacteria group	Firmicutes	3.80826	28	-	AUYW01	11	3637	3451	6/24/14	3/24/17	Contig	Army Medical and Veterinary Research Center	SAMN02869852	GCA_000711055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/055/GCA_000711055.1_A2_117	26341861	A2 117
Bacillus mycoides	1405	PRJNA382472	382472	Terrabacteria group	Firmicutes	6.55809	35.2747	chromosome:NZ_CP020743.1/CP020743.1; plasmid unnamed1:NZ_CP020744.1/CP020744.1; plasmid unnamed2:NZ_CP020745.1/CP020745.1; plasmid unnamed3:NZ_CP020746.1/CP020746.1; plasmid unnamed4:NZ_CP020747.1/CP020747.1; plasmid unnamed5:NZ_CP020748.1/CP020748.1; plasmid unnamed6:NZ_CP020749.1/CP020749.1; plasmid unnamed7:NZ_CP020750.1/CP020750.1; plasmid unnamed8:NZ_CP020751.1/CP020751.1	-	9	6888	6334	4/18/17	4/24/17	Complete Genome	Gansu Agricultural University	SAMN06706669	GCA_002104575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/575/GCA_002104575.1_ASM210457v1	-	Gnyt1
Bacillus subtilis subsp. subtilis str. 168	224308	PRJNA368655	368655	Terrabacteria group	Firmicutes	4.21539	43.5	chromosome:NZ_CP019663.1/CP019663.1	-	1	4418	4247	3/2/17	3/8/17	Chromosome	Georg-August-University Goettingen	SAMN06268590	GCA_002009135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/135/GCA_002009135.1_ASM200913v1	-	168
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.12708	45.2	-	LOBT01	76	4991	4706	2/11/16	3/19/17	Scaffold	Health Canada	SAMN04308162	GCA_001559805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/805/GCA_001559805.1_ASM155980v1	-	A4EZ700
Streptococcus mitis	28037	PRJNA327106	327106	Terrabacteria group	Firmicutes	1.99214	39.8	-	MKYF01	51	-	-	12/22/16	12/22/16	Contig	None	SAMN05509312	GCA_001914195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/195/GCA_001914195.1_ASM191419v1	-	-
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.84273	38	-	MLLF01	153	1872	1673	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297019	GCA_001867555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/555/GCA_001867555.1_ASM186755v1	27118061	AWRIB132
Xanthomonas oryzae pv. oryzae	64187	PRJNA269440	269440	Proteobacteria	Gammaproteobacteria	4.31947	63.9	-	JXFK01	430	4344	3509	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252526	GCA_001927935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/935/GCA_001927935.1_ASM192793v1	-	DXO-331
Campylobacter fetus subsp. venerealis str. Azul-94	593452	PRJNA7	7	Proteobacteria	delta/epsilon subdivisions	2.05503	36.5	-	ACLG01	1187	-	-	4/22/09	1/8/14	Contig	IIB-UNSAM	SAMN02471365	GCA_000174675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/675/GCA_000174675.1_CFV_v1_Assembly	19422718	Azul-94
Xanthomonas citri pv. mangiferaeindicae LMG 941	1156940	PRJEA86101	86101	Proteobacteria	Gammaproteobacteria	5.11154	64.8	-	CAHO01	195	4627	4188	3/13/12	6/15/17	Contig	Institute of Microbial Technology (CSIR)	SAMEA2272013	GCA_000263335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/335/GCA_000263335.1_XALMG941	22582385	LMG 941
Brucella abortus 78/32	1198698	PRJNA176538	176538	Proteobacteria	Alphaproteobacteria	3.28223	57.2	-	AQJF01	9	3359	3111	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN01047749	GCA_000370205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/205/GCA_000370205.1_Bruc_abor_78_32_V1	-	78/32
Francisella tularensis subsp. tularensis 1378	1292389	PRJNA189042	189042	Proteobacteria	Gammaproteobacteria	1.81536	32.3	-	APKY01	12	1875	1580	4/23/13	4/1/17	Contig	Dugway Proving Ground	SAMN02469750	GCA_000380385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/385/GCA_000380385.1_H643_1.0	-	1378
Shigella boydii	621	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.74726	50.9	-	JVNL01	167	4977	4537	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03197465	GCA_001076355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/355/GCA_001076355.1_ASM107635v1	26230489	272_SBOY
Clostridioides difficile CD21	1151258	PRJNA85689	85689	Terrabacteria group	Firmicutes	4.04199	28.5	-	AVGO01	159	3766	3573	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766605	GCA_000448745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/745/GCA_000448745.2_ASM44874v2	-	CD21
Vibrio cholerae HC-56A2	991974	PRJNA63955	63955	Proteobacteria	Gammaproteobacteria	4.02937	47.5	-	ALDX01	106	3845	3632	7/18/12	3/23/17	Scaffold	Institute for Genome Sciences	SAMN00622041	GCA_000279205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/205/GCA_000279205.1_ASM27920v1	-	HC-56A2
Ralstonia solanacearum	305	PRJNA241341	241341	Proteobacteria	Betaproteobacteria	5.25188	66.7	-	JNGD01	215	4681	4402	6/20/14	4/2/17	Scaffold	Canadian Food Inspection Agency	SAMN02821162	GCA_000710695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/695/GCA_000710695.1_Ralstonia_solanacearum_R3bv2_strain_NCPPB909	26272559	NCPPB 909
Bacillus thuringiensis serovar kurstaki str. HD-1	1261129	PRJNA238239	238239	Terrabacteria group	Firmicutes	6.38625	34.7	-	JMHW01	193	6967	6417	6/19/14	4/2/17	Contig	University of Oklahoma Health Sciences Center	SAMN02641787	GCA_000710255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/255/GCA_000710255.1_BTK_A5	25035322	HD-1
Lactococcus lactis subsp. lactis bv. diacetylactis	44688	PRJNA355067	355067	Terrabacteria group	Firmicutes	2.50925	35.2745	chromosome:NZ_CP020604.1/CP020604.1; plasmid pLd1:NZ_CP020605.1/CP020605.1; plasmid pLd2:NZ_CP020606.1/CP020606.1; plasmid pLd3:NZ_CP020607.1/CP020607.1; plasmid pLd4:NZ_CP020608.1/CP020608.1; plasmid pLd5:NZ_CP020609.1/CP020609.1; plasmid pLd6:NZ_CP020610.1/CP020610.1; plasmid pLd7:NZ_CP020611.1/CP020611.1	-	8	2582	2384	5/17/17	5/24/17	Complete Genome	Wageningen University & Research	SAMN06061939	GCA_002148215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/215/GCA_002148215.1_ASM214821v1	-	FM03
Bacillus cereus biovar anthracis str. CI	637380	PRJNA36309	36309	Terrabacteria group	Firmicutes	5.48665	35.2707	chromosome:NC_014335.1/CP001746.1; plasmid pBAslCI14:NC_014333.1/CP001749.1; plasmid pCI-XO1:NC_014331.1/CP001747.1; plasmid pCI-XO2:NC_014332.1/CP001748.1	-	4	5949	5494	7/9/10	6/15/17	Complete Genome	Georg-August-University Goettingen	SAMN02603256	GCA_000143605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/143/605/GCA_000143605.1_ASM14360v1	20634886	CI
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.21636	66.9	-	MUQF01	134	7865	7418	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001813	GCA_001991595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/595/GCA_001991595.1_ASM199159v1	-	VC7488
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.22319	38.6	-	NGPK01	98	2258	2016	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848394	GCA_002253865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/865/GCA_002253865.1_ASM225386v1	-	114q
Bacteroides fragilis str. DS-71	1339277	PRJNA206108	206108	FCB group	Bacteroidetes/Chlorobi group	5.03889	43.3	-	JGDF01	308	4421	4100	3/20/14	4/18/17	Contig	IGS	SAMN02314418	GCA_000599085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/085/GCA_000599085.1_ASM59908v1	-	DS-71
Shigella sonnei	624	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.99426	51	-	LOSF01	2	5538	4547	12/21/15	8/8/17	Contig	US Food and Drug Administration 	SAMN03996274	GCA_001471365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/365/GCA_001471365.1_ASM147136v1	-	FDAARGOS_128
Legionella pneumophila subsp. pneumophila	91891	PRJNA239272	239272	Proteobacteria	Gammaproteobacteria	3.42848	38.3	-	JFIB01	14	3110	2965	3/7/14	3/24/17	Scaffold	Beijing Institute of Microbiology and Epidemiology	SAMN02650978	GCA_000586095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/095/GCA_000586095.1_ATCC_43703	-	ATCC 43703
Bacillus licheniformis	1402	PRJEB18273	384155	Terrabacteria group	Firmicutes	4.25368	45.8	-	FWEZ01	25	4418	4267	4/25/17	5/1/17	Scaffold	Jessy	SAMEA100366168	GCA_900171545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/545/GCA_900171545.1_Blich	-	R-53713
Vibrio vulnificus	672	PRJNA355116	355116	Proteobacteria	Gammaproteobacteria	4.9166	46.6	-	NOIZ01	136	4636	4381	8/30/17	9/1/17	Contig	FDA	SAMN06062366	GCA_002278545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/545/GCA_002278545.1_ASM227854v1	-	WAPHLVBRA00009
Pseudomonas syringae pv. actinidiae ICMP 19104	1194409	PRJNA167431	167431	Proteobacteria	Gammaproteobacteria	5.96358	58.8	-	AOJZ01	434	5709	5242	7/1/13	3/24/17	Contig	The New Zealand Institute for Plant & Food Research Limited	SAMN02470808	GCA_000416865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/865/GCA_000416865.1_ASM41686v1	-	ICMP 19104
Streptococcus suis NCTC 10446	1214160	PRJNA171442	171442	Terrabacteria group	Firmicutes	2.0146	41.3	-	ALLU01	41	2007	1871	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469563	GCA_000440835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/835/GCA_000440835.1_version1	-	NCTC 10446
Streptococcus agalactiae	1311	PRJNA254653	254653	Terrabacteria group	Firmicutes	1.98998	35.3	-	LRQO01	42	2051	1924	2/2/16	3/19/17	Scaffold	The Genome Institute at Washington University	SAMN03950349	GCA_001546755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/755/GCA_001546755.1_ASM154675v1	-	PSS_7678
Bacillus anthracis	1392	PRJNA238050	238050	Terrabacteria group	Firmicutes	5.60108	35.2672	chromosome:NZ_CP009902.1/CP009902.1; plasmid pXO1:NZ_CP009901.1/CP009901.1; plasmid pXO2:NZ_CP009900.1/CP009900.1	-	3	6203	5791	2/5/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03174509	GCA_000832965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/965/GCA_000832965.1_ASM83296v1	25931591	2002013094
Bacillus cereus	1396	PRJNA320205	320205	Terrabacteria group	Firmicutes	5.6718	35.2668	chromosome:NZ_CP015589.1/CP015589.1; plasmid pAR10:NZ_CP015590.1/CP015590.1; plasmid pAR41:NZ_CP015591.1/CP015591.1; plasmid pAR460:NZ_CP015592.1/CP015592.1	-	4	6023	5456	11/17/16	4/10/17	Complete Genome	Nanjing Agricultural University	SAMN04924832	GCA_001880305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/305/GCA_001880305.1_ASM188030v1	-	AR156
Bifidobacterium longum	216816	PRJEB18553	373869	Terrabacteria group	Actinobacteria	2.66124	59.9	-	FTRF01	68	2408	2208	2/8/17	4/6/17	Contig	University of Tromso	SAMEA51821668	GCA_900157055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/055/GCA_900157055.1_Bifido_09_v1	-	-
Shigella flexneri	623	PRJNA315925	315925	Proteobacteria	Gammaproteobacteria	4.79714	50.6	-	LVIU01	581	5499	4365	5/20/16	8/11/17	Contig	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04570188	GCA_001649105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/105/GCA_001649105.1_ASM164910v1	-	HN4s06
Bacillus anthracis str. A0174	486622	PRJNA27921	27921	Terrabacteria group	Firmicutes	5.29191	35.2	-	ABLT01	60	5917	5518	4/4/08	5/18/17	Scaffold	Los Alamos National Laboratory	SAMN02470265	GCA_000182055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/182/055/GCA_000182055.1_ASM18205v1	-	A0174
Pseudomonas putida	303	PRJNA284264	284264	Proteobacteria	Gammaproteobacteria	6.10037	61.6	-	LDJF01	39	5719	5459	7/21/15	4/3/17	Scaffold	"Estacion Experimental del Zaidin, CSIC"	SAMN03700748	GCA_001183585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/585/GCA_001183585.1_ASM118358v1	26337875	JLR11
Leptospira interrogans serovar Naam str. Naam	1291361	PRJNA189019	189019	Spirochaetes	Spirochaetia	4.98788	35.1	-	AOUX01	209	4683	4202	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920596	GCA_000342745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/745/GCA_000342745.1_CA_glsol168	-	Naam
Streptococcus pyogenes ABC020052543	1439218	PRJNA233289	233289	Terrabacteria group	Firmicutes	1.83005	38.5	-	JJFD01	2	1878	1755	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567638	GCA_000629685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/685/GCA_000629685.1_Stre_pyog_ABC020052543_V1	-	ABC020052543
Candidatus Endomicrobium trichonymphae	1408204	PRJDB4765	343922	Elusimicrobia	Endomicrobia	1.13084	35.2657	chromosome:AP017459.1; plasmid pRSTT1:AP017460.1; plasmid pRSTT2:AP017461.1; plasmid pRSTT3:AP017462.1	-	4	939	740	9/21/16	9/21/16	Complete Genome	Tokyo Institute of Technology	SAMD00051155	GCA_002355835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/835/GCA_002355835.1_ASM235583v1	-	Rs-D17
Bacillus anthracis	1392	PRJNA238068	238068	Terrabacteria group	Firmicutes	5.50566	35.2652	chromosome:NZ_CP009464.1/CP009464.1; plasmid pXO1:NZ_CP009463.1/CP009463.1; plasmid pXO2:NZ_CP009462.1/CP009462.1	-	3	6128	5715	2/5/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03012770	GCA_000832565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/565/GCA_000832565.1_ASM83256v1	25931591	SK-102
Streptococcus pneumoniae MNZ37	1315309	PRJNA196248	196248	Terrabacteria group	Firmicutes	1.94692	39.8	-	ASJP01	66	2108	1915	6/12/13	3/2/17	Scaffold	University of Mississippi medical center	SAMN02471896	GCA_000411755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/755/GCA_000411755.1_ASM41175v1	23887920	MNZ37
Bacillus anthracis	1392	PRJNA238080	238080	Terrabacteria group	Firmicutes	5.50499	35.2648	chromosome:NZ_CP009331.1/CP009331.1; plasmid 1:NZ_CP009330.1/CP009330.1; plasmid 2:NZ_CP009329.1/CP009329.1	-	3	6129	5702	2/5/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03010428	GCA_000832465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/465/GCA_000832465.1_ASM83246v1	25931591	K3
Mycobacterium tuberculosis	1773	PRJNA196391	196391	Terrabacteria group	Actinobacteria	4.43313	65.1	chromosome:NZ_CP010968.1/CP010968.1	-	1	4226	4015	3/10/16	3/12/17	Chromosome	Universiti Teknologi MARA	SAMN03290700	GCA_001584745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/745/GCA_001584745.1_ASM158474v1	26981419	PR10
Haemophilus influenzae	727	PRJNA316650	316650	Proteobacteria	Gammaproteobacteria	1.91255	38.2	-	LVZC01	55	1984	1827	4/14/17	4/21/17	Contig	Genomic Research Laboratory (GRL)	SAMN04590162	GCA_002093175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/175/GCA_002093175.1_ASM209317v1	27756711	GE3
Mycobacterium bovis BCG	33892	PRJEB8560	294541	Terrabacteria group	Actinobacteria	4.29745	65.6	-	CUWM01	1	4189	3977	9/1/15	4/4/17	Scaffold	KAUST	SAMEA3257673	GCA_001287225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/225/GCA_001287225.1_bcg_Prague	-	Prague
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.05769	69.3	-	LNAI01	181	4783	4558	4/4/16	4/5/17	Contig	Robert Koch Institute	SAMN04229405	GCA_001610335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/335/GCA_001610335.1_ASM161033v1	-	MAH-E-61-1y
Lactococcus lactis subsp. lactis	1360	PRJNA294255	294255	Terrabacteria group	Firmicutes	2.4884	34.8	-	LKLR01	133	2525	2316	12/4/15	4/4/17	Contig	Radboudumc	SAMN04026638	GCA_001456675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/675/GCA_001456675.1_ASM145667v1	-	LMG9446
Bacillus cereus Rock4-2	526987	PRJNA29685	29685	Terrabacteria group	Firmicutes	5.76999	34.9	chromosome:NZ_CM000734.1/CM000734.1	ACMM01	1	11926	11404	4/30/09	6/15/17	Chromosome	Naval Medical Research Center	SAMN00727714	GCA_000161275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/275/GCA_000161275.1_ASM16127v1	22645259	Rock4-2
Staphylococcus epidermidis AU12-03	1220510	PRJNA171207	171207	Terrabacteria group	Firmicutes	2.40662	32	-	AMCS01	50	2389	2232	9/24/12	3/23/17	Contig	Griffith University	SAMN01103171	GCA_000308395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/395/GCA_000308395.1_ASM30839v1	23144393	AU12-03
Bacillus anthracis	1392	PRJNA309927	309927	Terrabacteria group	Firmicutes	5.50404	35.2647	chromosome:NZ_CP018903.1/CP018903.1; plasmid pXO1:NZ_CP018904.1/CP018904.1; plasmid pXO2:NZ_CP018905.1/CP018905.1	-	3	6114	5699	1/5/17	3/28/17	Complete Genome	Bundeswehr Insitute of Microbiology	SAMN06186720	GCA_001936375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/375/GCA_001936375.1_ASM193637v1	-	Tyrol 4675
Yersinia pestis subsp. microtus bv. Caucasica	385966	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.52284	47.5	-	LIYX01	270	4296	3880	9/21/15	3/26/17	Scaffold	SRCAMB	SAMN03861482	GCA_001295185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/185/GCA_001295185.1_ASM129518v1	26634751	SCPM-O-B-6974
Pseudomonas fluorescens	294	PRJNA283450	283450	Proteobacteria	Gammaproteobacteria	4.83766	58.6	-	LCYY01	61	4490	4303	6/5/15	4/3/17	Contig	"University of Michigan, Ann Arbor"	SAMN03650291	GCA_001020805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/805/GCA_001020805.1_ASM102080v1	-	AU11136
Bacillus anthracis	1392	PRJNA238205	238205	Terrabacteria group	Firmicutes	5.49834	35.2647	chromosome:NZ_CP009341.1/CP009341.1; plasmid 1:NZ_CP009340.1/CP009340.1; plasmid 2:NZ_CP009339.1/CP009339.1	-	3	6131	5713	2/5/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03010429	GCA_000832505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/505/GCA_000832505.1_ASM83250v1	25931591	Ohio ACB
Bacillus anthracis	1392	PRJNA238044	238044	Terrabacteria group	Firmicutes	5.50577	35.2647	chromosome:NZ_CP010322.1/CP010322.1; plasmid 1:NZ_CP010321.1/CP010321.1; plasmid 2:NZ_CP010320.1/CP010320.1	-	3	6117	5705	2/5/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03202901	GCA_000833125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/125/GCA_000833125.1_ASM83312v1	25931591	Canadian_bison
Bacillus anthracis	1392	PRJDB3549	284186	Terrabacteria group	Firmicutes	5.50465	35.2646	chromosome:AP014833.1; plasmid pXO1:AP014834.1; plasmid pXO2:AP014835.1	-	3	5992	5864	5/15/15	6/30/15	Complete Genome	National Institute of Infectious Diseases	SAMD00026520	GCA_002356575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/575/GCA_002356575.1_ASM235657v1	-	Shikan-NIID
Bacillus anthracis	1392	PRJNA238082	238082	Terrabacteria group	Firmicutes	5.50663	35.2646	chromosome:NZ_CP009328.1/CP009328.1; plasmid 1:NZ_CP009327.1/CP009327.1; plasmid 2:NZ_CP009326.1/CP009326.1	-	3	6129	5722	2/5/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03010433	GCA_000832445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/445/GCA_000832445.1_ASM83244v1	25931591	Vollum 1B
Bacillus anthracis str. Turkey32	1452727	PRJNA236040	236040	Terrabacteria group	Firmicutes	5.5053	35.2646	chromosome:NZ_CP009315.1/CP009315.1; plasmid unnamed:NZ_CP009316.1/CP009316.1; plasmid unnamed:NZ_CP009314.1/CP009314.1	-	3	6135	5726	2/5/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03010432	GCA_000833275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/275/GCA_000833275.1_ASM83327v1	25931591	Turkey32
Bacillus anthracis	1392	PRJNA273317	273317	Terrabacteria group	Firmicutes	5.50391	35.2646	chromosome:NZ_CP010792.1/CP010792.1; plasmid pXO1:NZ_CP010793.1/CP010793.1; plasmid pXO2:NZ_CP010794.1/CP010794.1	-	3	6135	5732	1/29/15	3/25/17	Complete Genome	BEI Resources/American Type	SAMN03290655	GCA_000830095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/095/GCA_000830095.1_ASM83009v1	-	Ames A0462
Pseudomonas fluorescens	294	PRJNA283457	283457	Proteobacteria	Gammaproteobacteria	6.67892	63.3	-	LCZC01	45	6157	5971	6/5/15	4/3/17	Contig	"University of Michigan, Ann Arbor"	SAMN03650324	GCA_001020815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/815/GCA_001020815.1_ASM102081v1	26227600	AU13852
Yersinia pestis	632	PRJNA293979	293979	Proteobacteria	Gammaproteobacteria	4.81765	47.6	-	LIXY01	19	4611	4402	1/10/16	3/27/17	Scaffold	Pacific Northwest National Laboratory	SAMN04012736	GCA_001509855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/855/GCA_001509855.1_ASM150985v1	26599979	Yp2126
Bacillus anthracis str. Vollum	261591	PRJNA243521	243521	Terrabacteria group	Firmicutes	5.50619	35.2646	chromosome:NZ_CP007666.1/CP007666.1; plasmid unnamed_1:NZ_CP007664.1/CP007664.1; plasmid unnamed_2:NZ_CP007665.1/CP007665.1	-	3	6131	5714	8/21/14	3/24/17	Complete Genome	Los Alamos National Laboratory	SAMN02736982	GCA_000742895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/895/GCA_000742895.1_ASM74289v1	25301645	Vollum
Staphylococcus epidermidis UC7032	1327991	PRJNA198773	198773	Terrabacteria group	Firmicutes	2.49199	32	-	ARWU01	119	2418	2274	6/13/13	3/24/17	Contig	Universita Cattolica del Sacro Cuore	SAMN02471389	GCA_000410915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/915/GCA_000410915.1_1st_assembly	24072859	UC7032
Bacillus cereus Rock4-18	526988	PRJNA29687	29687	Terrabacteria group	Firmicutes	5.92363	35	chromosome:NZ_CM000735.1/CM000735.1	ACMN01	1	9088	8635	4/30/09	6/15/17	Chromosome	Naval Medical Research Center	SAMN00727648	GCA_000161295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/295/GCA_000161295.1_ASM16129v1	-	Rock4-18
Lactococcus lactis subsp. lactis	1360	PRJNA294255	294255	Terrabacteria group	Firmicutes	2.70754	34.8	-	LKLS01	227	2789	2534	12/4/15	4/4/17	Contig	Radboudumc	SAMN04026639	GCA_001456685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/685/GCA_001456685.1_ASM145668v1	-	LMG9447
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.14557	69.2	-	LMVW01	207	4888	4627	4/4/16	4/5/17	Contig	Robert Koch Institute	SAMN04229408	GCA_001610355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/355/GCA_001610355.1_ASM161035v1	-	MAH-E-96-2
Mycobacterium bovis BCG	33892	PRJEB8560	294541	Terrabacteria group	Actinobacteria	4.31834	65.6	-	CUWG01	1	4184	3987	9/1/15	4/4/17	Scaffold	KAUST	SAMEA3257664	GCA_001287245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/245/GCA_001287245.1_bcg_China	-	China
Haemophilus influenzae	727	PRJNA316653	316653	Proteobacteria	Gammaproteobacteria	1.88988	38	-	LVZF01	30	1921	1784	4/14/17	4/21/17	Contig	Genomic Research Laboratory (GRL)	SAMN04590165	GCA_002093185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/185/GCA_002093185.1_ASM209318v1	27756711	GE49
Mycobacterium tuberculosis TRS9	1334055	PRJNA203167	203167	Terrabacteria group	Actinobacteria	4.41153	65.3	chromosome:NZ_CP008702.1/CP008702.1	-	1	4304	4055	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837629	GCA_001997425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/425/GCA_001997425.1_ASM199742v1	27261264	TRS9
Bacillus anthracis str. CDC 684	568206	PRJNA31329	31329	Terrabacteria group	Firmicutes	5.50676	35.2646	chromosome:NC_012581.1/CP001215.1; plasmid pX01:NC_012579.1/CP001216.1; plasmid pX02:NC_012577.1/CP001214.1	-	3	6134	5709	4/20/09	5/18/17	Complete Genome	The J. Craig Venter Institute	SAMN02603931	GCA_000021445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/445/GCA_000021445.1_ASM2144v1	-	CDC 684
Streptococcus pneumoniae MNZ41	1315310	PRJNA196249	196249	Terrabacteria group	Firmicutes	2.13045	39.7	-	ASJQ01	97	2283	2010	6/12/13	3/9/17	Scaffold	University of Mississippi medical center	SAMN02471897	GCA_000411775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/775/GCA_000411775.1_ASM41177v1	23887920	MNZ41
Bacillus anthracis str. H9401	768494	PRJNA49361	49361	Terrabacteria group	Firmicutes	5.49547	35.2644	chromosome:NC_017729.1/CP002091.1; plasmid BAP1:NC_017726.1/CP002092.1; plasmid BAP2:NC_017727.1/CP002093.1	-	3	6123	5709	4/17/12	5/18/17	Complete Genome	Korea Center for Disease Control & Prevention	SAMN02603474	GCA_000258885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/885/GCA_000258885.1_ASM25888v1	22815438	H9401
Bacillus anthracis	1392	PRJNA238204	238204	Terrabacteria group	Firmicutes	5.49118	35.2643	chromosome:NZ_CP009544.1/CP009544.1; plasmid pXO1:NZ_CP009543.1/CP009543.1; plasmid pXO2:NZ_CP009542.1/CP009542.1	-	3	6112	5703	2/5/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03010426	GCA_000832665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/665/GCA_000832665.1_ASM83266v1	25931591	BA1015
Streptococcus pyogenes ABC020052291	1439210	PRJNA233288	233288	Terrabacteria group	Firmicutes	1.83015	38.5	-	JJFE01	2	1878	1754	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567637	GCA_000629705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/705/GCA_000629705.1_Stre_pyog_ABC020052291_V1	-	ABC020052291
Leptospira interrogans serovar Copenhageni str. 2007005490	1291319	PRJNA188972	188972	Spirochaetes	Spirochaetia	4.6014	35	-	AOWR01	148	4115	3755	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920622	GCA_000342765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/765/GCA_000342765.1_CA_glsol043	-	2007005490
Pseudomonas putida	303	PRJNA296832	296832	Proteobacteria	Gammaproteobacteria	5.5438	64.4	-	LKGZ01	66	5070	4912	12/15/15	4/5/17	Scaffold	New Zealand Institute for Plant & Food research	SAMN04108877	GCA_001467305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/305/GCA_001467305.1_ASM146730v1	27056212	ABAC8
Bacillus anthracis	1392	PRJNA242332	242332	Terrabacteria group	Firmicutes	5.44071	35.1	-	JHCB02	31	6089	5706	6/2/14	3/25/17	Scaffold	ANSES	SAMN02693047	GCA_000697515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/697/515/GCA_000697515.2_ASM69751v2	"2,473,487,225,081,250"	ANSES_08-8_20
Shigella flexneri	623	PRJNA315925	315925	Proteobacteria	Gammaproteobacteria	4.47115	50.7	-	LVIV01	385	5154	4112	5/20/16	8/8/17	Contig	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04570189	GCA_001649115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/115/GCA_001649115.1_ASM164911v1	-	SH4s01
Bifidobacterium longum	216816	PRJEB18553	373869	Terrabacteria group	Actinobacteria	2.79457	59.8	-	FTRN01	83	2656	2389	2/8/17	4/6/17	Contig	University of Tromso	SAMEA51825418	GCA_900157065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/065/GCA_900157065.1_PC1_v1	-	-
Bacillus anthracis	1392	PRJNA231762	231762	Terrabacteria group	Firmicutes	5.49012	35.2642	chromosome:NZ_CP008846.1/CP008846.1; plasmid pX01:NZ_CP008847.1/CP008847.1; plasmid pX02:NZ_CP008848.1/CP008848.1	-	3	6092	5663	7/14/14	3/24/17	Complete Genome	Hanyang University	SAMN02874036	GCA_000725325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/325/GCA_000725325.1_ASM72532v1	25103761	HYU01
Bacillus anthracis	1392	PRJNA309927	309927	Terrabacteria group	Firmicutes	5.5038	35.2629	chromosome:NZ_CP015779.1/CP015779.1; plasmid pXO1:NZ_CP015777.1/CP015777.1; plasmid pXO2:NZ_CP015778.1/CP015778.1	-	3	6139	5735	6/2/16	3/28/17	Complete Genome	Bundeswehr Insitute of Microbiology	SAMN05003865	GCA_001654475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/654/475/GCA_001654475.1_ASM165447v1	-	Tangail-1
Streptococcus agalactiae	1311	PRJNA254654	254654	Terrabacteria group	Firmicutes	2.03161	35.3	-	LRQP01	85	2063	1981	2/2/16	3/19/17	Scaffold	The Genome Institute at Washington University	SAMN03956188	GCA_001546775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/775/GCA_001546775.1_ASM154677v1	-	PSS_7722
Streptococcus suis 42A	1214164	PRJNA171443	171443	Terrabacteria group	Firmicutes	2.29008	41.2	-	ALLV01	180	2281	2077	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469539	GCA_000440855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/855/GCA_000440855.1_version1	-	42A
Pseudomonas syringae pv. actinidiae ICMP 19072	1189079	PRJNA165721	165721	Proteobacteria	Gammaproteobacteria	6.01321	58.8	-	AOJW01	290	5788	5316	7/1/13	3/24/17	Contig	Plant & Food Research	SAMN02470812	GCA_000416885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/885/GCA_000416885.1_ASM41688v1	-	ICMP 19072
Vibrio vulnificus	672	PRJNA266293	266293	Proteobacteria	Gammaproteobacteria	5.07915	46.5	-	NOJG01	125	4877	4576	8/31/17	9/2/17	Contig	CDC	SAMN06090785	GCA_002284515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/515/GCA_002284515.1_ASM228451v1	-	PNUSAV000042
Bacillus licheniformis	1402	PRJNA348820	348820	Terrabacteria group	Firmicutes	4.18859	46.2	-	MLKN02	270	4479	3674	10/21/16	4/3/17	Contig	Hasselt University	SAMN05915910	GCA_001831295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/295/GCA_001831295.2_ASM183129v2	28302775	VSD4
Legionella pneumophila subsp. pneumophila	91891	PRJNA239272	239272	Proteobacteria	Gammaproteobacteria	3.33989	38.1	-	JFIC01	31	3049	2946	3/7/14	3/24/17	Scaffold	Beijing Institute of Microbiology and Epidemiology	SAMN02650977	GCA_000586115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/115/GCA_000586115.1_ATCC_43290	-	ATCC 43290
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.48408	50.8	-	LYES01	414	4829	4255	7/20/16	6/12/17	Contig	California Department of Public Health	SAMN04440955	GCA_001688105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/105/GCA_001688105.1_ASM168810v1	28028547	CDPH_C31
Bacteroides fragilis str. S13 L11	1339290	PRJNA206121	206121	FCB group	Bacteroidetes/Chlorobi group	4.86834	43.3	-	JGDI01	790	4407	3946	3/20/14	4/18/17	Contig	IGS	SAMN02314429	GCA_000599105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/105/GCA_000599105.1_ASM59910v1	-	S13 L11
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.19757	38.3	-	NGPJ01	103	2166	1997	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848395	GCA_002253875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/875/GCA_002253875.1_ASM225387v1	-	117n
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.41638	67	-	MUQV01	287	8025	7516	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001832	GCA_001991615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/615/GCA_001991615.1_ASM199161v1	-	VC13300
Bacillus anthracis	1392	PRJNA309927	309927	Terrabacteria group	Firmicutes	5.50345	35.2629	chromosome:NZ_CP014179.1/CP014179.1; plasmid pXO1:NZ_CP014177.1/CP014177.1; plasmid pXO2:NZ_CP014178.1/CP014178.1	-	3	6135	5733	2/1/16	3/27/17	Complete Genome	Bundeswehr Insitute of Microbiology	SAMN04442145	GCA_001543225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/225/GCA_001543225.1_ASM154322v1	27056225	Stendal
Bacillus anthracis	1392	PRJNA238045	238045	Terrabacteria group	Firmicutes	5.50397	35.2629	chromosome:NZ_CP009981.1/CP009981.1; plasmid plasmid1:NZ_CP009980.1/CP009980.1; plasmid plasmid2:NZ_CP009979.1/CP009979.1	-	3	6137	5723	2/5/15	4/10/17	Complete Genome	Los Alamos National Laboratory	SAMN03201418	GCA_000833065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/065/GCA_000833065.1_ASM83306v1	25931591	Ames
Bacillus thuringiensis serovar morrisoni	1441	PRJNA238240	238240	Terrabacteria group	Firmicutes	6.91681	35.2	-	JTHH01	8	7342	6688	2/9/15	4/3/17	Contig	Los Alamos National Laboratory	SAMN03218549	GCA_000833655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/655/GCA_000833655.1_ASM83365v1	25931591	HD 600
Ralstonia solanacearum	305	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	6.17614	63.4	-	JVBI01	224	5858	5562	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197780	GCA_001065525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/525/GCA_001065525.1_ASM106552v1	26230489	58_RSOL
Vibrio cholerae HC-57A2	991976	PRJNA63959	63959	Proteobacteria	Gammaproteobacteria	4.02539	47.5	-	ALDZ01	105	3835	3624	7/18/12	3/23/17	Scaffold	Institute for Genome Sciences	SAMN00622025	GCA_000279375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/375/GCA_000279375.1_ASM27937v1	-	HC-57A2
Clostridioides difficile CD34	1151260	PRJNA85693	85693	Terrabacteria group	Firmicutes	4.01771	28.2	-	AVGQ01	48	3753	3587	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766611	GCA_000448765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/765/GCA_000448765.2_ASM44876v2	-	CD34
Shigella boydii	621	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.24603	50.9	-	MSJT02	297	4585	4036	1/4/17	3/4/17	Scaffold	University of California at Davis	SAMN03358407	GCA_001933015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/933/015/GCA_001933015.2_ASM193301v2	-	BCW_4869
Francisella tularensis subsp. tularensis 80700075	1210520	PRJNA189044	189044	Proteobacteria	Gammaproteobacteria	1.81414	32.3	-	APKX01	13	1874	1604	4/23/13	4/1/17	Contig	Dugway Proving Ground	SAMN02469749	GCA_000380405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/405/GCA_000380405.1_H647_1.0	-	80700075
Brucella abortus 80/101	1160185	PRJNA173586	173586	Proteobacteria	Alphaproteobacteria	3.27873	57.2	-	AQJG01	8	3346	3108	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00811161	GCA_000370225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/225/GCA_000370225.1_Bruc_abor_80_101_V1	-	80/101
Xanthomonas citri pv. punicae str. LMG 859	1085630	PRJNA73081	73081	Proteobacteria	Gammaproteobacteria	4.94664	64.9	-	CAGJ01	217	4486	4010	1/17/12	6/15/17	Contig	"Institute of Microbial Technology (CSIR), Chandigarh, India"	SAMEA3138416	GCA_000285775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/775/GCA_000285775.1_ASM28577v1	22493202	LMG 859
Campylobacter fetus	196	PRJNA259858	259858	Proteobacteria	delta/epsilon subdivisions	1.74039	33.1	-	JRKX01	143	1840	1227	11/7/14	10/13/15	Contig	Nitte University	SAMN03013564	GCA_000773615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/615/GCA_000773615.1_ASM77361v1	26450717	MMM01
Xanthomonas oryzae pv. oryzae	64187	PRJNA269438	269438	Proteobacteria	Gammaproteobacteria	4.28417	63.9	-	JXFI01	467	4232	3434	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252523	GCA_001927945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/945/GCA_001927945.1_ASM192794v1	-	DXO-246
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.93379	37.8	-	MLLH01	515	2085	1708	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297021	GCA_001867585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/585/GCA_001867585.1_ASM186758v1	27118061	AWRIB134
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.05828	45.3	-	LOHO01	72	4880	4583	3/21/16	3/19/17	Scaffold	Health Canada	SAMN04327442	GCA_001595575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/575/GCA_001595575.1_ASM159557v1	-	A4EZ724
Bacillus subtilis	1423	PRJNA388844	388844	Terrabacteria group	Firmicutes	4.0937	44.2	chromosome:NZ_CP021985.1/CP021985.1	-	1	4153	3911	6/22/17	6/24/17	Chromosome	"Assam University, Silchar"	SAMN07187745	GCA_002205435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/435/GCA_002205435.1_ASM220543v1	-	SR1
Bacillus anthracis str. A16	743835	PRJNA40303	40303	Terrabacteria group	Firmicutes	5.50545	35.2629	chromosome:NZ_CP001970.2/CP001970.2; plasmid pXO1:NZ_CP001971.2/CP001971.2; plasmid pXO2:NZ_CP001972.2/CP001972.2	-	3	6133	5728	1/3/14	3/28/17	Complete Genome	Beijing Genomics Institute	SAMN02641483	GCA_000512835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/835/GCA_000512835.2_ASM51283v2	-	A16
Clostridium botulinum B2 128	1379272	PRJNA213565	213565	Terrabacteria group	Firmicutes	3.84447	28	-	AUYU01	10	3692	3540	6/24/14	3/24/17	Contig	Army Medical and Veterinary Research Center	SAMN02869848	GCA_000711065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/065/GCA_000711065.1_B2_128	26341861	B2 128
Enterococcus faecalis EnGen0297	491075	PRJNA31457	31457	Terrabacteria group	Firmicutes	3.12993	37.4	-	ACIX01	103	3201	2944	3/16/09	3/22/17	Scaffold	Baylor College of Medicine	SAMN00002227	GCA_000160155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/155/GCA_000160155.1_ASM16015v1	-	HH22
Streptococcus mutans TCI-294	1074185	PRJNA72109	72109	Terrabacteria group	Firmicutes	1.89133	36.8	-	AGML01	109	1914	1800	10/6/11	3/22/17	Contig	JCVI	SAMN02436441	GCA_000229925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/925/GCA_000229925.2_SMUT7-NEX_25-294	-	TCI-294
Neisseria gonorrhoeae MU_NG23	1351814	PRJNA209654	209654	Proteobacteria	Betaproteobacteria	2.09228	52.4	-	ATRK01	342	2367	2122	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02338839	GCA_001026485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/485/GCA_001026485.1_ASM102648v1	-	MU_NG23
Enterococcus faecium P1123	1134828	PRJNA82045	82045	Terrabacteria group	Firmicutes	2.97698	37.6	-	AMAP01	259	3098	2888	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299503	GCA_000295155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/155/GCA_000295155.2_ASM29515v2	-	P1123
Stenotrophomonas maltophilia	40324	PRJNA323771	323771	Proteobacteria	Gammaproteobacteria	4.54896	66.4	-	LYVH01	45	4166	4007	6/24/16	4/5/17	Contig	"UMR5557, University of Lyon"	SAMN05188742	GCA_001676295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/295/GCA_001676295.1_ASM167629v1	-	Sm32COP
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12577	41.2	-	CWEZ01	73	2058	1877	6/23/15	3/26/17	Contig	SC	SAMEA1032824	GCA_001176185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/185/GCA_001176185.1_6903_8_64	-	EQUI0209
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.28189	40.3	-	LQDC01	32	2139	2045	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366498	GCA_001929465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/465/GCA_001929465.1_ASM192946v1	-	2154PM
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.7898	46.7	-	JTIV01	471	2979	2482	6/3/16	4/10/17	Contig	Wageningen University	SAMN03196625	GCA_001656755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/755/GCA_001656755.1_ASM165675v1	-	Lrh1
Brucella melitensis 043	1266367	PRJNA182774	182774	Proteobacteria	Alphaproteobacteria	3.28912	57.1	-	ANOD01	28	3353	2866	1/9/13	4/10/17	Scaffold	The Ministry of Science and Technology of the People’s Republic of China	SAMN02470982	GCA_000331655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/655/GCA_000331655.1_Brucella_melitensis_043	-	43
Bacillus anthracis str. A0248	592021	PRJNA33543	33543	Terrabacteria group	Firmicutes	5.50393	35.2629	chromosome:NC_012659.1/CP001598.1; plasmid pXO1:NC_012656.1/CP001599.1; plasmid pXO2:NC_012655.1/CP001597.1	-	3	6139	5738	5/1/09	5/18/17	Complete Genome	The J. Craig Venter Institute	SAMN02603932	GCA_000022865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/865/GCA_000022865.1_ASM2286v1	-	A0248
Bordetella bronchiseptica OSU553	1331242	PRJNA202154	202154	Proteobacteria	Betaproteobacteria	5.68597	67.8	-	JGXZ01	250	5578	5496	5/12/14	6/2/15	Contig	JCVI	SAMN02231294	GCA_000689975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/975/GCA_000689975.1_gbb46v01	25908122	OSU553
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.40643	53.5	-	NDHL01	50	2316	2144	4/28/17	5/3/17	Contig	Institute for Medical Research	SAMN06311219	GCA_002115125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/125/GCA_002115125.1_ASM211512v1	-	rz656
Mycoplasma pneumoniae	2104	PRJNA291007	291007	Terrabacteria group	Tenericutes	0.81951	40	-	LHPZ01	12	795	676	9/22/15	4/10/17	Scaffold	Centre for genomic regulation (CRG)	SAMN03897310	GCA_001296625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/625/GCA_001296625.1_ASM129662v1	26335586	Mympn_4911
Yersinia enterocolitica	630	PRJEB13626	384942	Proteobacteria	Gammaproteobacteria	4.48041	47	-	FKKV01	149	4237	3960	5/1/17	5/9/17	Contig	IP	SAMEA3935397	GCA_900079915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/915/GCA_900079915.1_IP35470	-	-
Serratia marcescens subsp. marcescens	211759	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.64462	59	-	LJEV02	182	5546	5234	10/15/15	3/28/17	Contig	University of KwaZulu Natal	SAMN04011457	GCA_001317205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/205/GCA_001317205.2_56_S29v.02	-	945154301
Lactobacillus plantarum	1590	PRJNA263713	263713	Terrabacteria group	Firmicutes	3.07935	44.5	-	JSUX01	174	3002	2801	5/8/15	3/26/17	Contig	TIFN	SAMN03160585	GCA_001005695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/695/GCA_001005695.1_ASM100569v1	-	TIFN101
Mannheimia haemolytica	75985	PRJNA339917	339917	Proteobacteria	Gammaproteobacteria	2.21143	41.3	-	MEHR01	17	2139	1040	9/8/16	9/8/16	Contig	Madurai kamaraj university	SAMN05717708	GCA_001722305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/305/GCA_001722305.1_ASM172230v1	-	NIVEDI/MH/1
Campylobacter coli H8	887310	PRJNA52757	52757	Proteobacteria	delta/epsilon subdivisions	1.79818	31	-	AINU01	191	1866	1760	3/16/12	3/15/17	Contig	Cornell University	SAMN02428960	GCA_000254175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/175/GCA_000254175.2_ASM25417v2	-	H8
Burkholderia sp. MSMB1498	1637842	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.20046	67.2	-	LOYJ01	133	6885	6277	1/22/16	4/11/17	Contig	Northern Arizona University	SAMN03449292	GCA_001526245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/245/GCA_001526245.1_ASM152624v1	-	MSMB1498
Propionibacterium acnes HL082PA1	765120	PRJNA49275	49275	Terrabacteria group	Actinobacteria	2.5016	60.1	-	ADZJ01	17	2511	2386	8/5/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189238	GCA_000145375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/375/GCA_000145375.1_ASM14537v1	-	HL082PA1
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.47215	32.7	-	CUDR01	74	2420	2311	3/31/15	3/26/17	Contig	SC	SAMEA1035125	GCA_001235405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/405/GCA_001235405.1_7067_4_56	-	51-32
Proteus mirabilis	584	PRJEB15761	347738	Proteobacteria	Gammaproteobacteria	3.77311	38.7	-	FNAA01	31	3471	3346	10/20/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216484	GCA_900101725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/725/GCA_900101725.1_IMG-taxon_2654588119_annotated_assembly	-	NLAE-zl-C285
Enterobacter cloacae	550	PRJNA270000	270000	Proteobacteria	Gammaproteobacteria	4.72994	55	-	JWPX01	116	4506	4341	12/31/14	3/25/17	Contig	University of Malaya	SAMN03261528	GCA_000812505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/505/GCA_000812505.1_ASM81250v1	-	GN6
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.78066	56.2	-	FKZR01	50	5547	5298	5/19/16	2/21/17	Scaffold	SC	SAMEA2273647	GCA_900083825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/825/GCA_900083825.1_11983_8_7	-	2880STDY5682571
Cronobacter sakazakii	28141	PRJNA329459	329459	Proteobacteria	Gammaproteobacteria	4.52216	57.2	-	MBRU01	541	4273	4048	4/17/17	4/21/17	Contig	Guangdong Institute of Microbiology	SAMN05412993	GCA_002094585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/585/GCA_002094585.1_ASM209458v1	28057934	cro560W
Lactobacillus salivarius	1624	PRJNA357984	357984	Terrabacteria group	Firmicutes	2.17609	32.9	-	NBEW01	101	2202	2056	4/5/17	4/8/17	Scaffold	University College Cork	SAMN06163251	GCA_002079805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/805/GCA_002079805.1_ASM207980v1	-	AH43324
Mycobacterium abscessus 5S-0708	1001730	PRJNA65189	65189	Terrabacteria group	Actinobacteria	5.25325	64	-	AKUA01	6	5366	5206	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00728603	GCA_000271085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/085/GCA_000271085.1_ASM27108v1	-	5S-0708
Vibrio sp. V20_P4S3T152	1938673	PRJNA361511	361511	Proteobacteria	Gammaproteobacteria	3.9029	44.9	-	NDIN01	293	3671	3420	8/4/17	8/6/17	Scaffold	Instituto de ecologia	SAMN06251414	GCA_002241405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/405/GCA_002241405.1_ASM224140v1	-	V20_P4S3T152
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.96604	61.8	-	DCLM01	353	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451417	GCA_002321055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/055/GCA_002321055.1_ASM232105v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.10375	67.5	-	LPAR01	90	6432	6105	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449354	GCA_001527035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/035/GCA_001527035.1_ASM152703v1	-	MSMB1607WGS
Pseudoalteromonas sp. JW3	1859458	PRJNA336466	336466	Proteobacteria	Gammaproteobacteria	4.85442	43.3	-	MKJT01	33	4215	4041	10/26/16	4/13/17	Scaffold	"Second Institute of Oceanography, State Oceanic Administration"	SAMN05511239	GCA_001854555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/555/GCA_001854555.1_ASM185455v1	-	JW3
Corynebacterium pseudotuberculosis	1719	PRJNA339888	339888	Terrabacteria group	Actinobacteria	2.35767	52.2	-	MDWN01	10	2157	2017	9/6/16	4/5/17	Contig	Southwest University	SAMN05609609	GCA_001719645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/645/GCA_001719645.1_ASM171964v1	27881549	XH02
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	4.17648	38.8	-	MDIL01	60	4140	3930	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022844	GCA_001706275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/275/GCA_001706275.1_ASM170627v1	-	St-12537-91
Citrobacter freundii	546	PRJNA335559	335559	Proteobacteria	Gammaproteobacteria	5.52388	52.1	-	MDCY01	117	5534	5220	11/17/16	4/5/17	Contig	Hospital Universitary 12 de octubre	SAMN05447751	GCA_001880905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/905/GCA_001880905.1_ASM188090v1	-	CF_13_ST_93
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.97908	55.2	-	LAAM01	90	4958	4734	3/19/15	3/25/17	Contig	JCVI	SAMN03283626	GCA_000957585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/585/GCA_000957585.1_ASM95758v1	-	34982
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.3218	55	-	LDBX01	64	5287	5046	5/21/15	4/6/17	Contig	JCVI	SAMN03495960	GCA_001011935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/935/GCA_001011935.1_ASM101193v1	-	GN04794
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.10316	64	-	FVDC01	53	5070	4855	3/10/17	3/18/17	Scaffold	SC	SAMEA2259556	GCA_900131775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/775/GCA_900131775.1_11861_7_19	-	751
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.0993	66.8	-	LPET01	49	6632	6336	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449467	GCA_001530005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/005/GCA_001530005.1_ASM153000v1	-	MSMB1330WGS
Pseudomonas sp. Leaf129	1736268	PRJNA297956	297956	Proteobacteria	Gammaproteobacteria	4.87733	61.9	-	LMOC01	13	4413	4280	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151648	GCA_001423465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/465/GCA_001423465.1_Leaf129	26633631	Leaf129
Streptomyces sp. 142MFCol3.1	1172179	PRJNA187960	187960	Terrabacteria group	Actinobacteria	9.72604	71.1	-	AUKV01	99	8719	8109	7/10/13	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440811	GCA_000424945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/945/GCA_000424945.1_ASM42494v1	-	142MFCol3.1
Bacillus sp. FJAT-25496	1742359	PRJNA299437	299437	Terrabacteria group	Firmicutes	4.89841	36.8	-	LMBY01	137	4631	4428	11/6/15	4/11/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04202598	GCA_001439625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/625/GCA_001439625.1_ASM143962v1	-	FJAT-25496
Acinetobacter sp. WC-743	903945	PRJNA53455	53455	Proteobacteria	Gammaproteobacteria	4.90237	37.9	-	AMFQ01	154	4692	4387	2/1/13	5/18/17	Contig	Walter Reed Army Institute of Research	SAMN00761217	GCA_000335555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/555/GCA_000335555.1_gacin40v1.0	-	WC-743
Clostridium sp. DSM 18688	1924269	PRJNA355889	355889	Terrabacteria group	Firmicutes	2.95851	26.7	-	MRAD01	47	2710	2501	2/28/17	3/2/17	Contig	Institute for Environmental Health	SAMN06094650	GCA_002008265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/008/265/GCA_002008265.1_ASM200826v1	-	PE
Sphingomonas sp. Leaf198	1736299	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.20181	65.6	-	LMPX01	7	3791	3686	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151679	GCA_001424005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/005/GCA_001424005.1_Leaf198	26633631	Leaf198
Rhodococcus sp. 14-2470-1a	2023150	PRJNA395383	395383	Terrabacteria group	Actinobacteria	6.06673	64.6	-	NPFZ01	67	5680	5494	8/18/17	8/21/17	Contig	Oregon State University	SAMN07414569	GCA_002259425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/425/GCA_002259425.1_ASM225942v1	-	14-2470-1a
Enterobacter sp. EGD-HP1	1357268	PRJNA211614	211614	Proteobacteria	Gammaproteobacteria	4.90611	55.7	-	AVOP01	36	4817	4623	7/24/14	4/11/17	Contig	National Environmental Engineering Research Institute-CSIR	SAMN02952953	GCA_000733275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/275/GCA_000733275.2_ASM73327v2	-	EGD-HP1
Staphylococcus sp. HMSC065A08	1739417	PRJNA300067	300067	Terrabacteria group	Firmicutes	2.63393	32.5	-	LTWP01	73	2518	2391	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480342	GCA_001813455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/455/GCA_001813455.1_ASM181345v1	-	HMSC065A08
Corynebacterium sp. HMSC076C10	1739361	PRJNA300011	300011	Terrabacteria group	Actinobacteria	2.47327	58.8	-	LTEE01	82	2161	2076	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477667	GCA_001812455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/455/GCA_001812455.1_ASM181245v1	-	HMSC076C10
Arthrobacter sp. YC-RL1	1652545	PRJNA283257	283257	Terrabacteria group	Actinobacteria	4.03735	64	-	LCYH01	17	3774	3610	5/27/15	4/10/17	Scaffold	Chinese Academy of Agricultural Scineces	SAMN03610580	GCA_001013455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/013/455/GCA_001013455.1_ASM101345v1	26159532	YC-RL1
Bradyrhizobium sp. Gha	1855318	PRJEB17359	351552	Proteobacteria	Alphaproteobacteria	8.25331	62.9	-	FOQM01	95	7934	7318	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216525	GCA_900113735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/735/GCA_900113735.1_IMG-taxon_2651870130_annotated_assembly	-	Gha
Streptococcus sp. HMSC076H07	1739454	PRJNA300104	300104	Terrabacteria group	Firmicutes	1.95543	35.2	-	LTVL01	32	1967	1888	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480376	GCA_001814065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/065/GCA_001814065.1_ASM181406v1	-	HMSC076H07
Mycobacterium sp. GA-1199	1772287	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.43881	66.8	-	LQIX01	56	5151	5002	1/6/16	4/11/17	Contig	JCVI	SAMN04349504	GCA_001500045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/500/045/GCA_001500045.1_ASM150004v1	-	GA-1199
Prevotella sp. CAG:5226	1262930	PRJEB917	206715	FCB group	Bacteroidetes/Chlorobi group	2.87061	49.3	-	CBBW01	207	2354	2309	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138610	GCA_000434455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/455/GCA_000434455.1_MGS5226	-	-
Enterococcus sp. 3C7_DIV0644	1834174	PRJNA313452	313452	Terrabacteria group	Firmicutes	3.60465	43	-	NGLK01	7	3403	3264	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634076	GCA_002141235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/235/GCA_002141235.1_ASM214123v1	-	3C7_DIV0644
Paenibacillus sp. P3E	1349435	PRJNA316702	316702	Terrabacteria group	Firmicutes	6.95686	49.5	-	LVWH01	241	6157	5810	12/19/16	4/16/17	Contig	INCT - Núcleo de Microbiologia Agrícola	SAMN04589772	GCA_001909045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/045/GCA_001909045.1_ASM190904v1	-	P3E
Thioalkalivibrio sp. ALMg9	1266912	PRJNA183026	183026	Proteobacteria	Gammaproteobacteria	2.92571	66.4	-	AQYC01	9	2829	2725	4/23/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02440419	GCA_000380625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/625/GCA_000380625.1_ASM38062v1	-	ALMg9
Ruminococcus sp. UBA4350	1947427	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.97821	55.4	-	DGSY01	206	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455779	GCA_002394125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/125/GCA_002394125.1_ASM239412v1	28894102	-
Bacteroides sp. 43_46	1897051	PRJNA321218	321218	FCB group	Bacteroidetes/Chlorobi group	4.88253	42	-	MNQN01	143	3840	3597	12/23/16	12/23/16	Scaffold	None	SAMN05717219	GCA_001915455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/455/GCA_001915455.1_ASM191545v1	27819664	-
Prochlorococcus sp. scB245a_520M11	1471523	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.400975	31.3	-	JFNV01	81	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671394	GCA_000634535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/535/GCA_000634535.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. P0140	1895614	PRJNA341032	341032	Proteobacteria	delta/epsilon subdivisions	1.63083	33.5	-	MJKS01	21	1673	1589	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687052	GCA_002138835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/835/GCA_002138835.1_ASM213883v1	28854596	P0140
Microbacterium sp. AR7-10	1891970	PRJNA338661	338661	Terrabacteria group	Actinobacteria	3.03982	69.2	-	MJIR01	123	2963	2774	11/14/16	4/14/17	Scaffold	New Mexico State University	SAMN05560420	GCA_001878835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/835/GCA_001878835.1_ASM187883v1	-	AR7-10
Rhizobium sp. R72	1764278	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	5.79598	59.6	-	LOLA01	39	5686	5364	6/29/17	7/1/17	Contig	Centro de Ciencias Genomicas UNAM	SAMN04304762	GCA_002211385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/385/GCA_002211385.1_ASM221138v1	-	R72
Mesorhizobium sp. NBIMC_P2-C4	1380604	PRJNA213831	213831	Proteobacteria	Alphaproteobacteria	6.36346	62.9	-	AVBQ01	61	6032	5877	2/12/14	4/9/17	Contig	FDA	SAMN02951898	GCA_000568575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/575/GCA_000568575.1_NBIMC_P2-C4	24367538	NBIMC_P2-C4
Bacillus velezensis	492670	PRJNA379023	379023	Terrabacteria group	Firmicutes	4.07184	46.4	-	MZXS01	109	4067	3858	4/10/17	4/13/17	Contig	University of Neuchatel	SAMN06565752	GCA_002082365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/365/GCA_002082365.1_ASM208236v1	-	OEE1
Gilliamella apicola	1196095	PRJNA339422	339422	Proteobacteria	Gammaproteobacteria	2.97902	33.7	-	NASC01	304	2697	2539	5/16/17	5/24/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN05603550	GCA_002142345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/345/GCA_002142345.1_ASM214234v1	-	N-28
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.57744	57.5	-	FXOI01	85	5634	5297	4/28/17	5/6/17	Scaffold	SC	SAMEA2609430	GCA_900181105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/105/GCA_900181105.1_14936_3_1	-	3189STDY5864758
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.81062	32.3	-	FQRT01	16	2809	2641	11/25/16	4/6/17	Contig	SC	SAMEA3449124	GCA_900128345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/345/GCA_900128345.1_17175_3_68	-	3688STDY6125122
Xanthomonas phaseoli pv. phaseoli	317013	PRJNA264819	264819	Proteobacteria	Gammaproteobacteria	5.22543	64.7	-	JSFA02	190	4725	4205	11/10/14	4/11/17	Contig	University of Exeter	SAMN03142817	GCA_000774035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/035/GCA_000774035.2_NCPPB3035v2	26500625	NCPPB 3035
Xanthomonas phaseoli pv. phaseoli	317013	PRJNA264774	264774	Proteobacteria	Gammaproteobacteria	5.10969	64.8	-	JSBS02	152	4590	4065	10/30/14	4/3/17	Contig	University of Exeter	SAMN03142401	GCA_000775205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/205/GCA_000775205.2_NCPPB1158v2	26500625	NCPPB 1158
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.84356	32.3	-	FQRU01	23	2860	2683	11/25/16	4/6/17	Contig	SC	SAMEA3449125	GCA_900128355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/355/GCA_900128355.1_17175_3_69	-	3688STDY6125123
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.79833	57	-	FXOF01	107	5868	5501	4/28/17	5/6/17	Scaffold	SC	SAMEA2609432	GCA_900181145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/145/GCA_900181145.1_14936_2_93	-	3189STDY5864947
Gilliamella apicola	1196095	PRJNA239650	239650	Proteobacteria	Gammaproteobacteria	2.3206	34.6	-	JFZX01	139	2169	2040	5/22/14	4/2/17	Scaffold	Yale University	SAMN02677639	GCA_000695585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/585/GCA_000695585.1_GilApiwkB30v1.0	25053814	wkB30
Bacillus velezensis	492670	PRJNA379527	379527	Terrabacteria group	Firmicutes	3.81082	46.7	-	NBMN01	38	3769	3613	4/10/17	4/13/17	Contig	University of Neuchatel	SAMN06611072	GCA_002082375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/375/GCA_002082375.1_ASM208237v1	-	SSBW-18
Mesorhizobium sp. NBIMC_P2-C1	1320555	PRJNA197277	197277	Proteobacteria	Alphaproteobacteria	5.9482	63.1	-	AVBN01	92	5666	5513	2/12/14	4/9/17	Contig	FDA	SAMN02951894	GCA_000568635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/635/GCA_000568635.1_NBIMC_P2-C1	24367538	NBIMC_P2-C1
Rhizobium sp. R339	1764273	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.80692	61.6	-	LOKV01	29	6588	6329	6/29/17	7/1/17	Contig	Centro de Ciencias Genomicas UNAM	SAMN04304757	GCA_002211395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/395/GCA_002211395.1_ASM221139v1	-	R339
Campylobacter sp. P0222	1895617	PRJNA341035	341035	Proteobacteria	delta/epsilon subdivisions	1.61308	33.7	-	MJKV01	22	1680	1603	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687055	GCA_002138855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/855/GCA_002138855.1_ASM213885v1	28854596	P0222
Prochlorococcus sp. scB245a_521A19	1471524	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.16054	31.1	-	JFNW01	330	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671395	GCA_000634555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/555/GCA_000634555.2_De_novo_assembly_of_single-cell_genomes	24763590	-
Bacteroides sp. 44_46	1897052	PRJNA321218	321218	FCB group	Bacteroidetes/Chlorobi group	3.57567	45.7	-	MNQO01	20	2902	2804	12/23/16	12/23/16	Scaffold	None	SAMN05717220	GCA_001915465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/465/GCA_001915465.1_ASM191546v1	27819664	-
Ruminococcus sp. UBA4310	1947424	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.53156	52.3	-	DGUM01	89	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450770	GCA_002394695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/695/GCA_002394695.1_ASM239469v1	28894102	-
Paenibacillus sp. P26E	1349432	PRJNA316709	316709	Terrabacteria group	Firmicutes	7.11838	49.4	-	LVWI01	124	6263	5915	12/19/16	4/16/17	Contig	INCT - Núcleo de Microbiologia Agrícola	SAMN04589806	GCA_001909055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/055/GCA_001909055.1_ASM190905v1	-	P26E
Enterococcus sp. 3C8_DIV0646	1834175	PRJNA313452	313452	Terrabacteria group	Firmicutes	3.81092	43.3	-	NGLJ01	18	3487	3266	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634075	GCA_002141275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/275/GCA_002141275.1_ASM214127v1	-	3C8_DIV0646
Prevotella sp. CAG:604	1262932	PRJEB955	206868	FCB group	Bacteroidetes/Chlorobi group	2.54424	43.2	-	CBCB01	178	2105	2073	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138613	GCA_000434515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/515/GCA_000434515.1_MGS604	-	-
Mycobacterium sp. IS-3022	1772277	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.16873	67	-	LQIN01	51	4979	4845	1/6/16	4/11/17	Contig	JCVI	SAMN04349494	GCA_001500065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/500/065/GCA_001500065.1_ASM150006v1	-	IS-3022
Streptococcus sp. HMSC062D07	1739461	PRJNA300111	300111	Terrabacteria group	Firmicutes	1.75337	39.2	-	LTVH01	18	1772	1706	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480380	GCA_001814215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/215/GCA_001814215.1_ASM181421v1	-	HMSC062D07
Bradyrhizobium sp. Rc3b	1855322	PRJEB17495	351656	Proteobacteria	Alphaproteobacteria	8.37567	63.7	-	FOUS01	49	7874	7487	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216573	GCA_900114915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/915/GCA_900114915.1_IMG-taxon_2654587901_annotated_assembly	-	Rc3b
Arthrobacter sp. HG	1638643	PRJEB8889	280193	Terrabacteria group	Actinobacteria	4.84981	61.9	-	CVLG01	3	4470	4331	4/9/15	8/1/17	Scaffold	Institute of Technical Biochemistry	SAMEA3310068	GCA_001375615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/615/GCA_001375615.1_Draft_genome_sequence_of_an_Arthrobacter_sp.	-	HG
Corynebacterium sp. HMSC064E10	1739364	PRJNA300014	300014	Terrabacteria group	Actinobacteria	2.46017	58.8	-	LTYH01	10	2175	2097	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480028	GCA_001812505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/505/GCA_001812505.1_ASM181250v1	-	HMSC064E10
Staphylococcus sp. HMSC068D05	1739420	PRJNA300070	300070	Terrabacteria group	Firmicutes	2.53976	33.7	-	LWQG01	50	2397	2302	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480344	GCA_001813495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/495/GCA_001813495.1_ASM181349v1	-	HMSC068D05
Enterobacter sp. UCD-UG_FMILLET	1542468	PRJNA260303	260303	Proteobacteria	Gammaproteobacteria	4.80141	55.8	-	JRJC01	53	4687	4413	10/2/14	4/9/17	Contig	UC Davis	SAMN03020201	GCA_000762975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/975/GCA_000762975.1_ASM76297v1	25614569	UCD-UG_FMILLET
Rhodococcus sp. EsD8	1301088	PRJEB1561	198653	Terrabacteria group	Actinobacteria	6.62563	70.1	-	CAVJ01	287	6081	5747	4/22/13	4/8/17	Scaffold	MDA	SAMEA2272078	GCA_000382865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/865/GCA_000382865.1_ASM38286v1	-	EsD8
Sphingomonas sp. Leaf407	1736369	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	3.78402	67.7	-	LMQO01	9	3473	3380	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151759	GCA_001425385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/385/GCA_001425385.1_Leaf407	26633631	Leaf407
Clostridium sp. link-BC1	1799534	PRJNA311502	311502	Terrabacteria group	Firmicutes	4.2021	38.2	-	LSMZ01	192	3678	3276	6/20/17	6/22/17	Contig	Norwegian University of Life Sciences	SAMN04482601	GCA_002202365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/365/GCA_002202365.1_ASM220236v1	-	link-BC1
Acinetobacter sp. OIFC021	903928	PRJNA53457	53457	Proteobacteria	Gammaproteobacteria	4.08406	38.6	-	AMFR01	108	4002	3761	2/1/13	4/6/17	Contig	Walter Reed Army Institute of Research	SAMN00761218	GCA_000335575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/575/GCA_000335575.1_gacin41v1.0	-	OIFC021
Bacillus sp. SGD-V-76	1414648	PRJNA302099	302099	Terrabacteria group	Firmicutes	4.11419	37.7	-	LNQP01	146	4344	4012	12/4/15	4/11/17	Scaffold	CSIR-National Chemical Laboratory	SAMN04263914	GCA_001457055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/055/GCA_001457055.1_ASM145705v1	-	SGD-V-76
Streptomyces sp. TAA204	1289387	PRJNA188326	188326	Terrabacteria group	Actinobacteria	6.58216	71.2	-	AUKW01	39	5541	5280	7/10/13	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441152	GCA_000424965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/424/965/GCA_000424965.1_ASM42496v1	-	TAA204
Pseudomonas sp. Root329	1736515	PRJNA297942	297942	Proteobacteria	Gammaproteobacteria	6.73355	59.1	-	LMCV01	51	6259	6045	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155784	GCA_001424925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/925/GCA_001424925.1_Root329	26633631	Root329
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.38459	66.8	-	LPEW01	78	7782	7422	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449470	GCA_001530045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/045/GCA_001530045.1_ASM153004v1	-	MSMB1333WGS
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.10337	64	-	FVDF01	52	5060	4860	3/10/17	3/18/17	Scaffold	SC	SAMEA2259557	GCA_900131795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/795/GCA_900131795.1_11861_7_20	-	752
Klebsiella aerogenes	548	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.02831	55.2	-	LESY01	85	4946	4703	6/19/15	4/6/17	Contig	Broad Institute	SAMN03280174	GCA_001030055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/055/GCA_001030055.1_Ente_aero_UCI98_V1	-	UCI98
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.19097	54.8	-	LAAL01	100	5183	4943	3/19/15	3/25/17	Contig	JCVI	SAMN03283615	GCA_000957595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/595/GCA_000957595.1_ASM95759v1	-	34984
Citrobacter freundii	546	PRJNA335561	335561	Proteobacteria	Gammaproteobacteria	5.38075	51.7	-	MDDA01	180	5351	5086	11/17/16	4/5/17	Contig	Hospital Universitary 12 de octubre	SAMN05447777	GCA_001880915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/915/GCA_001880915.1_ASM188091v1	-	CF_15_ST_94
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	4.14321	38.8	-	MDIP01	101	4119	3873	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022874	GCA_001706285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/285/GCA_001706285.1_ASM170628v1	-	UKK-0551
Corynebacterium pseudotuberculosis	1719	PRJNA353916	353916	Terrabacteria group	Actinobacteria	2.3201	52.2	-	MQVG01	6	2128	1846	1/10/17	4/10/17	Contig	Federal University of Para	SAMN06028557	GCA_001942005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/005/GCA_001942005.1_ASM194200v1	-	PA07
Pseudoalteromonas sp. HM-SA03	2029678	PRJNA400113	400113	Proteobacteria	Gammaproteobacteria	5.25171	43.1	-	NSDG01	209	4638	4259	9/11/17	9/13/17	Scaffold	University of New South Wales	SAMN07556797	GCA_002289345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/345/GCA_002289345.1_ASM228934v1	-	HM-SA03
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.86592	67	-	LPBG01	124	7264	6849	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449369	GCA_001527065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/065/GCA_001527065.1_ASM152706v1	-	MSMB1804WGS
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.92647	63.6	-	DCLO01	379	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451421	GCA_002321095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/095/GCA_002321095.1_ASM232109v1	28894102	-
Vibrio sp. HENC-02	992011	PRJNA64029	64029	Proteobacteria	Gammaproteobacteria	5.18887	45.6	-	AJSR01	1716	6684	6622	10/15/12	11/19/13	Scaffold	Institute for Genome Sciences	SAMN00752548	GCA_000305735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/735/GCA_000305735.2_ASM30573v2	-	HENC-02
Mycobacterium abscessus 3A-0810-R	1001717	PRJNA65163	65163	Terrabacteria group	Actinobacteria	5.28764	64.1	-	AKUP01	20	5392	5278	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00672650	GCA_000271105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/105/GCA_000271105.1_ASM27110v1	-	3A-0810-R
Lactobacillus salivarius	1624	PRJNA357984	357984	Terrabacteria group	Firmicutes	2.08862	33	-	NBEY01	134	2120	1961	4/5/17	4/8/17	Scaffold	University College Cork	SAMN06163249	GCA_002079845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/845/GCA_002079845.1_ASM207984v1	-	AH4231
Cronobacter sakazakii	28141	PRJNA329459	329459	Proteobacteria	Gammaproteobacteria	4.1086	57.6	-	MBRW01	568	4139	3705	4/17/17	4/21/17	Contig	Guangdong Institute of Microbiology	SAMN05412999	GCA_002094635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/635/GCA_002094635.1_ASM209463v1	28057934	cro1611A1-1
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.95945	56	-	FKYO01	36	5789	5530	5/19/16	2/21/17	Scaffold	SC	SAMEA2273768	GCA_900083835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/835/GCA_900083835.1_12045_7_3	-	2880STDY5682693
Enterobacter cloacae	550	PRJNA271365	271365	Proteobacteria	Gammaproteobacteria	4.8891	54.9	-	JXAE01	78	4694	4511	1/15/15	3/25/17	Contig	University of Malaya	SAMN03274147	GCA_000818625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/625/GCA_000818625.1_ASM81862v1	-	6kgm
Proteus mirabilis	584	PRJEB17332	351499	Proteobacteria	Gammaproteobacteria	3.95055	38.7	-	FOPN01	46	3686	3515	10/31/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487853	GCA_900113495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/495/GCA_900113495.1_IMG-taxon_2623620510_annotated_assembly	-	NLAE-zl-G534
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.49649	32.7	-	CUHL01	92	2488	2344	3/31/15	3/26/17	Contig	SC	SAMEA1035064	GCA_001235545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/545/GCA_001235545.1_7068_7_67	-	131062
Propionibacterium acnes HL092PA1	765086	PRJNA49205	49205	Terrabacteria group	Actinobacteria	2.50212	60.1	-	ADXU01	14	2516	2395	8/5/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189246	GCA_000145435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/435/GCA_000145435.1_ASM14543v1	-	HL092PA1
Burkholderia sp. MSMB1826	1637875	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.34358	66.9	-	LOYN01	62	6794	6396	1/22/16	4/11/17	Contig	Northern Arizona University	SAMN03449297	GCA_001526325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/325/GCA_001526325.1_ASM152632v1	-	MSMB1826
Campylobacter coli H9	887311	PRJNA52759	52759	Proteobacteria	delta/epsilon subdivisions	1.6035	31.3	-	AINV01	91	1666	1568	3/16/12	3/15/17	Contig	Cornell University	SAMN02429003	GCA_000254195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/195/GCA_000254195.2_ASM25419v2	-	H9
Lactobacillus plantarum	1590	PRJNA279953	279953	Terrabacteria group	Firmicutes	3.33009	44.4	-	LBDF01	18	3261	3053	5/18/15	3/26/17	Contig	Federal State Scientific-Industrial Company MICROGEN	SAMN03452286	GCA_001010175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/175/GCA_001010175.1_ASM101017v1	-	8 RA-3
Serratia marcescens subsp. marcescens	211759	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.79217	58.8	-	LJEX02	179	5742	5416	10/15/15	3/28/17	Contig	University of KwaZulu Natal	SAMN04011458	GCA_001317425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/425/GCA_001317425.2_59_S30v.02	-	945174350
Yersinia enterocolitica	630	PRJEB13626	384942	Proteobacteria	Gammaproteobacteria	4.42072	46.9	-	FKKU01	159	4186	3909	5/1/17	5/9/17	Contig	IP	SAMEA3935394	GCA_900079925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/925/GCA_900079925.1_IP35465	-	-
Mycoplasma pneumoniae	2104	PRJNA291007	291007	Terrabacteria group	Tenericutes	0.821813	40.1	-	LHQA01	12	799	686	9/22/15	4/10/17	Scaffold	Centre for genomic regulation (CRG)	SAMN03897311	GCA_001296665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/665/GCA_001296665.1_ASM129666v1	26335586	Mympn_5392
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.41528	53.6	-	NDHM01	48	2324	2163	4/28/17	5/3/17	Contig	Institute for Medical Research	SAMN06311218	GCA_002115145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/145/GCA_002115145.1_ASM211514v1	-	rz632
Bordetella bronchiseptica	518	PRJDB3555	279062	Proteobacteria	Betaproteobacteria	6.7801	66.1	-	BBVB01	90	-	-	3/19/15	5/30/15	Contig	Keio University	SAMD00027153	GCA_000974745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/745/GCA_000974745.1_ASM97474v1	25953178	KU1201
Bacillus anthracis str. 'Ames Ancestor'	261594	PRJNA10784	10784	Terrabacteria group	Firmicutes	5.50393	35.2629	chromosome:NC_007530.2/AE017334.2; plasmid pXO1:NC_007322.2/AE017336.2; plasmid pXO2:NC_007323.3/AE017335.3	-	3	6138	5737	5/19/04	5/18/17	Complete Genome	J. Craig Venter Institute	SAMN02603433	GCA_000008445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/445/GCA_000008445.1_ASM844v1	18952800	Ames Ancestor; A2084
Brucella melitensis BG2 (S27)	1169223	PRJNA173535	173535	Proteobacteria	Alphaproteobacteria	3.29778	57.2	-	AQKA01	10	3372	3149	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN00839732	GCA_000370625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/625/GCA_000370625.1_Bruc_meli_BG2_S27_V1	-	BG2 (S27)
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	3.00782	46.5	-	JTIW01	114	3083	2822	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196621	GCA_001656765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/765/GCA_001656765.1_ASM165676v1	-	Lrh34
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.28139	40.3	-	LQDQ01	34	2140	2041	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366512	GCA_001929525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/525/GCA_001929525.1_ASM192952v1	-	2320PM
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15165	41.2	-	CWEL01	87	2101	1913	6/24/15	3/26/17	Contig	SC	SAMEA1032825	GCA_001176205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/205/GCA_001176205.1_6903_7_41	-	EQUI0186
Stenotrophomonas maltophilia	40324	PRJNA323790	323790	Proteobacteria	Gammaproteobacteria	4.13972	66.9	-	LYVI01	26	3770	3666	6/24/16	4/5/17	Contig	"UMR5557, University of Lyon"	SAMN05188789	GCA_001676315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/315/GCA_001676315.1_ASM167631v1	-	Sm41DVV
Enterococcus faecium ERV99	1134827	PRJNA82043	82043	Terrabacteria group	Firmicutes	2.74681	37.8	-	AMAQ01	210	2789	2653	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299502	GCA_000295175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/175/GCA_000295175.2_ASM29517v2	-	ERV99
Neisseria gonorrhoeae SK12684	1352525	PRJNA209335	209335	Proteobacteria	Betaproteobacteria	2.0697	52.7	-	ATPK01	436	2469	2049	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02338787	GCA_001026535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/535/GCA_001026535.1_ASM102653v1	-	SK12684
Streptococcus mutans TCI-298	1074186	PRJNA72111	72111	Terrabacteria group	Firmicutes	1.7435	37	-	AGMM01	136	1762	1649	10/6/11	3/22/17	Contig	JCVI	SAMN02436523	GCA_000229945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/945/GCA_000229945.2_SMUT7-NEX_34-298	-	TCI-298
Enterococcus faecalis T8	565639	PRJNA37777	37777	Terrabacteria group	Firmicutes	3.03739	37.5	-	ACOC01	24	3095	2911	8/24/09	3/22/17	Scaffold	Broad Institute	SAMN02595328	GCA_000161875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/875/GCA_000161875.1_ASM16187v1	-	T8
Clostridium botulinum B2 267	1379278	PRJNA213576	213576	Terrabacteria group	Firmicutes	3.90358	27.9898	plasmid p1_B2_267:NZ_AUYY01000011.1/AUYY01000011.1; plasmid p2_B2_267:NZ_AUYY01000012.1/AUYY01000012.1	AUYY01	12	3771	3559	6/24/14	3/24/17	Contig	Army Medical and Veterinary Research Center	SAMN02869846	GCA_000711095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/095/GCA_000711095.1_B2_267	26341861	B2 267
Bacillus anthracis	1392	PRJNA238136	238136	Terrabacteria group	Firmicutes	5.48987	35.2625	chromosome:NZ_CP009697.1/CP009697.1; plasmid pXO1:NZ_CP009696.1/CP009696.1; plasmid pXO2:NZ_CP009695.1/CP009695.1	-	3	6095	5655	2/5/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03075602	GCA_000832745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/745/GCA_000832745.1_ASM83274v1	25931591	RA3
Bacillus subtilis	1423	PRJNA392594	392594	Terrabacteria group	Firmicutes	4.21561	44.2	chromosome:NZ_CP022391.1/CP022391.1	-	1	4157	3969	7/17/17	7/19/17	Chromosome	Davangere University	SAMN07303434	GCA_002220075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/075/GCA_002220075.1_ASM222007v1	-	GS 188
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.1518	45.2	-	LRFN01	37	4954	4716	4/4/16	3/19/17	Scaffold	Health Canada	SAMN04422012	GCA_001608605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/605/GCA_001608605.1_ASM160860v1	-	A0EZ664
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.91033	37.9	-	MLLJ01	421	1967	1608	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297023	GCA_001867605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/605/GCA_001867605.1_ASM186760v1	27118061	AWRIB138
Xanthomonas oryzae pv. oryzae	64187	PRJNA269442	269442	Proteobacteria	Gammaproteobacteria	4.26259	63.9	-	JXFM01	424	4234	3390	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252538	GCA_001927955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/927/955/GCA_001927955.1_ASM192795v1	-	DXO-397
Campylobacter fetus subsp. fetus	32019	PRJNA326599	326599	Proteobacteria	delta/epsilon subdivisions	1.75833	33.2	-	MKEI01	96	1843	1190	10/13/16	10/13/16	Contig	Centro de Pesquisas Rene Rachou	SAMN05289873	GCA_001816265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/265/GCA_001816265.1_ASM181626v1	-	ATCC 27374
Xanthomonas axonopodis pv. malvacearum str. GSPB1386	1118965	PRJNA78127	78127	Proteobacteria	Gammaproteobacteria	4.97426	64.7	-	AHIB01	127	4477	4040	11/5/12	6/15/17	Contig	"Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresources /Institute of Bioscience and Technology, College of Agriculture, Hainan University"	SAMN02469610	GCA_000309905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/905/GCA_000309905.1_ASM30990v1	-	GSPB1386
Brucella abortus 80/28	1169214	PRJNA173503	173503	Proteobacteria	Alphaproteobacteria	3.29367	57.2	-	AQJH01	4	3366	3109	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00839700	GCA_000370245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/245/GCA_000370245.1_Bruc_abor_80_28_V1	-	80/28
Francisella tularensis subsp. tularensis 79201237	1292390	PRJNA189048	189048	Proteobacteria	Gammaproteobacteria	1.81378	32.3	-	APKW01	21	1884	1573	4/23/13	4/1/17	Contig	Dugway Proving Ground	SAMN02469752	GCA_000380425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/425/GCA_000380425.1_H646_1.0	-	79201237
Shigella boydii	621	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.86358	50.4	-	MSJS02	243	5235	4579	1/4/17	3/4/17	Scaffold	University of California at Davis	SAMN03358406	GCA_001933075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/933/075/GCA_001933075.2_ASM193307v2	-	BCW_4868
Clostridioides difficile CD22	1151259	PRJNA85691	85691	Terrabacteria group	Firmicutes	4.02917	28.2	-	AVGP01	167	3777	3543	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766608	GCA_000448785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/785/GCA_000448785.2_ASM44878v2	-	CD22
Vibrio cholerae CP1030(3)	991990	PRJNA63987	63987	Proteobacteria	Gammaproteobacteria	4.01058	47.4	-	ALCZ01	116	3844	3611	7/18/12	3/23/17	Scaffold	Institute for Genome Sciences	SAMN00622033	GCA_000279555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/555/GCA_000279555.1_ASM27955v1	26980836	CP1030(3)
Ralstonia solanacearum	305	PRJNA298373	298373	Proteobacteria	Betaproteobacteria	5.80424	66.9	-	LKVH01	169	5208	4943	1/4/16	4/4/17	Scaffold	Guangxi University	SAMN04158631	GCA_001484095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/095/GCA_001484095.1_ASM148409v1	27081126	Rs-T02
Bacillus thuringiensis	1428	PRJNA260736	260736	Terrabacteria group	Firmicutes	5.61003	34.8	-	JYCL01	94	5955	5647	3/5/15	4/3/17	Contig	Los Alamos National Laboratory	SAMN03025775	GCA_000948235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/235/GCA_000948235.1_BFA_10_A	-	Lr7/2
Bacillus anthracis str. SVA11	1392837	PRJNA217316	217316	Terrabacteria group	Firmicutes	5.48752	35.2625	chromosome:NZ_CP006742.1/CP006742.1; plasmid pXO1:NZ_CP006743.1/CP006743.1; plasmid pXO2:NZ_CP006744.1/CP006744.1	-	3	6096	5653	2/28/14	3/24/17	Complete Genome	National Veterinary Institute	SAMN03081486	GCA_000583105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/105/GCA_000583105.1_ASM58310v1	24551231	SVA11
Bacillus anthracis	1392	PRJNA238135	238135	Terrabacteria group	Firmicutes	5.48726	35.2624	chromosome:NZ_CP009700.1/CP009700.1; plasmid pXO1:NZ_CP009699.1/CP009699.1; plasmid pXO2:NZ_CP009698.1/CP009698.1	-	3	6100	5660	2/5/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03010427	GCA_000832725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/725/GCA_000832725.1_ASM83272v1	25931591	BA1035
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.99249	67.1	-	MUQW01	190	7643	7115	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001833	GCA_001991625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/625/GCA_001991625.1_ASM199162v1	-	VC14507
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.19295	38.3	-	NGPN01	98	2163	1992	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848391	GCA_002253905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/905/GCA_002253905.1_ASM225390v1	-	111v
Bacteroides fragilis str. S36L11	1339327	PRJNA206170	206170	FCB group	Bacteroidetes/Chlorobi group	5.72306	43.7	-	JGDJ01	294	5353	4925	3/20/14	4/2/17	Contig	IGS	SAMN02315066	GCA_000599125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/125/GCA_000599125.1_ASM59912v1	-	S36L11
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.5835	50.9	-	LYDX01	440	5099	4311	7/20/16	6/12/17	Contig	California Department of Public Health	SAMN04440980	GCA_001688115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/115/GCA_001688115.1_ASM168811v1	28028547	CDPH_C99
Legionella pneumophila subsp. pneumophila	91891	PRJNA239272	239272	Proteobacteria	Gammaproteobacteria	3.43124	38.3	-	JFID01	27	3121	2968	3/7/14	3/24/17	Scaffold	Beijing Institute of Microbiology and Epidemiology	SAMN02650976	GCA_000586135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/135/GCA_000586135.1_ATCC_43283	-	ATCC 43283
Vibrio vulnificus	672	PRJNA355116	355116	Proteobacteria	Gammaproteobacteria	5.08774	46.5	-	NOJF01	152	4895	4594	8/22/17	9/8/17	Contig	FDA	SAMN06062373	GCA_002287295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/295/GCA_002287295.1_ASM228729v1	-	WAPHLVBRA00002
Pseudomonas syringae pv. theae NCPPB 2598	1094175	PRJNA208000	208000	Proteobacteria	Gammaproteobacteria	6.21032	58.6	-	ATDJ01	532	5821	5443	8/5/13	3/24/17	Contig	CRA	SAMN02469668	GCA_000444115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/115/GCA_000444115.1_CLC6_0_3	-	NCPPB 2598
Streptococcus suis 88-1861	1214168	PRJNA171444	171444	Terrabacteria group	Firmicutes	2.27225	39.7	-	ALLW01	102	2309	2149	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469505	GCA_000440875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/875/GCA_000440875.1_version1	-	88-1861
Streptococcus agalactiae	1311	PRJNA254657	254657	Terrabacteria group	Firmicutes	2.14275	35.2	-	LRQQ01	27	2211	2106	2/2/16	3/19/17	Scaffold	The Genome Institute at Washington University	SAMN03956189	GCA_001546785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/785/GCA_001546785.1_ASM154678v1	-	PSS_7736
Bacillus anthracis	1392	PRJNA257008	257008	Terrabacteria group	Firmicutes	5.47706	35.2621	chromosome:NZ_CP010852.1/CP010852.1; plasmid pXO1:NZ_CP010853.1/CP010853.1; plasmid pXO2:NZ_CP010854.1/CP010854.1	-	3	6102	5715	2/13/15	3/25/17	Complete Genome	µFORGE	SAMN02999504	GCA_000875715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/875/715/GCA_000875715.1_ASM87571v1	-	A1144
Bacillus cereus	1396	PRJNA238071	238071	Terrabacteria group	Firmicutes	5.64247	35.2618	chromosome:NZ_CP009605.1/CP009605.1; plasmid pBFR_1:NZ_CP009604.1/CP009604.1; plasmid pBFR_2:NZ_CP009606.1/CP009606.1; plasmid pBFR_3:NZ_CP009603.1/CP009603.1	-	4	6116	5797	2/10/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03092702	GCA_000835185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/835/185/GCA_000835185.1_ASM83518v1	25931591	S2-8
Bifidobacterium longum	216816	PRJEB18553	373869	Terrabacteria group	Actinobacteria	2.81203	59.7	-	FTRM01	81	2650	2410	2/8/17	4/6/17	Contig	University of Tromso	SAMEA51824668	GCA_900157075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/075/GCA_900157075.1_Bifido_S1_v1	-	-
Shigella flexneri	623	PRJNA315925	315925	Proteobacteria	Gammaproteobacteria	4.55233	50.7	-	LVIW01	379	5203	4182	5/20/16	8/8/17	Contig	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04570191	GCA_001649125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/125/GCA_001649125.1_ASM164912v1	-	SH4s04
Bacillus anthracis	1392	PRJNA242332	242332	Terrabacteria group	Firmicutes	5.44647	35.1	-	JHDR02	30	6096	5732	6/2/14	3/25/17	Scaffold	ANSES	SAMN02699415	GCA_000697535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/697/535/GCA_000697535.2_ASM69753v2	"2,473,487,225,081,250"	ANSES_99-100
Pseudomonas putida	303	PRJNA314556	314556	Proteobacteria	Gammaproteobacteria	5.75183	62.2	-	LVHH01	106	5432	5111	5/17/16	4/5/17	Scaffold	Korea Research Institute of Bioscience and Biotechnology (KRIBB)	SAMN04545448	GCA_001645635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/635/GCA_001645635.1_ASM164563v1	-	KB9
Leptospira interrogans serovar Pyrogenes str. Sri Lanka 14	1291358	PRJNA188982	188982	Spirochaetes	Spirochaetia	4.83012	35	-	AOWI01	242	4449	3970	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01919809	GCA_000342805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/805/GCA_000342805.1_CA_glsol064	-	Sri Lanka 14
Streptococcus pyogenes ABC020048541	1439182	PRJNA233284	233284	Terrabacteria group	Firmicutes	1.87431	38.5	-	JJFF01	7	1960	1838	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567633	GCA_000629725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/725/GCA_000629725.1_Stre_pyog_ABC020048541_V1	-	ABC020048541
Bacillus cereus	1396	PRJNA238242	238242	Terrabacteria group	Firmicutes	5.6423	35.2618	chromosome:NZ_CP009596.1/CP009596.1; plasmid pBFC_1:NZ_CP009593.1/CP009593.1; plasmid pBFC_2:NZ_CP009594.1/CP009594.1; plasmid pBFC_3:NZ_CP009595.1/CP009595.1	-	4	6116	5792	2/5/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03085852	GCA_000832765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/765/GCA_000832765.1_ASM83276v1	25931591	3a
Bacillus anthracis	1392	PRJNA397960	397960	Terrabacteria group	Firmicutes	5.5465	35.2498	chromosome:NZ_CP023001.1/CP023001.1; plasmid pX01:NZ_CP023002.1/CP023002.1; plasmid pX02:NZ_CP023003.1/CP023003.1	-	3	6154	5653	8/30/17	9/1/17	Complete Genome	"Friedrich Loeffler Institut, Federal Research Institute for Animal Health"	SAMN07498358	GCA_002277915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/915/GCA_002277915.1_ASM227791v1	-	14RA5914
Streptococcus pneumoniae MNZ85	1315311	PRJNA196251	196251	Terrabacteria group	Firmicutes	2.14686	39.5	-	ASJF01	97	2298	2030	6/21/13	3/8/17	Scaffold	University of Mississippi medical center	SAMN02471900	GCA_000412955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/955/GCA_000412955.1_ASM41295v1	23887920	MNZ85
Lactococcus lactis subsp. lactis	1360	PRJNA320717	320717	Terrabacteria group	Firmicutes	2.54203	35.2471	chromosome:NZ_CP015905.1/CP015905.1; plasmid pUC063A:NZ_CP016715.1/CP016715.1; plasmid pUC063B:NZ_CP016716.1/CP016716.1; plasmid pUC063C:NZ_CP016717.1/CP016717.1; plasmid pUC063D:NZ_CP016718.1/CP016718.1; plasmid pUC063E:NZ_CP016719.1/CP016719.1	-	6	2623	2417	4/4/17	4/5/17	Complete Genome	University College Cork	SAMN04956302	GCA_002078495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/495/GCA_002078495.1_ASM207849v1	28356072	UC063
Mycobacterium tuberculosis 1821ADB35	1334076	PRJNA203188	203188	Terrabacteria group	Actinobacteria	4.41153	65.5	chromosome:NZ_CP009198.1/CP009198.1	-	1	4289	4073	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837650	GCA_001997465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/465/GCA_001997465.1_ASM199746v1	27261264	1821ADB35
Haemophilus influenzae	727	PRJNA316652	316652	Proteobacteria	Gammaproteobacteria	1.78838	38	-	LVZE01	24	1762	1630	4/14/17	4/21/17	Contig	Genomic Research Laboratory (GRL)	SAMN04590164	GCA_002093195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/195/GCA_002093195.1_ASM209319v1	27756711	GE42
Mycobacterium bovis BCG	33892	PRJEB8560	294541	Terrabacteria group	Actinobacteria	4.29354	65.6	-	CUWF01	1	4191	3963	9/1/15	4/4/17	Scaffold	KAUST	SAMEA3257665	GCA_001287325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/325/GCA_001287325.1_bcg_Connaught	-	Connaught
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.03617	69.2	-	LMVV01	143	4788	4551	4/4/16	4/5/17	Contig	Robert Koch Institute	SAMN04229407	GCA_001610375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/375/GCA_001610375.1_ASM161037v1	-	MAH-E-63-1
Lactococcus lactis subsp. lactis	1360	PRJNA294255	294255	Terrabacteria group	Firmicutes	2.41093	35.1	-	LKLT01	225	2456	2271	12/4/15	4/4/17	Contig	Radboudumc	SAMN04026640	GCA_001456695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/695/GCA_001456695.1_ASM145669v1	-	LMG14418
Bacillus cereus F65185	526989	PRJNA29689	29689	Terrabacteria group	Firmicutes	6.13318	34.7	chromosome:NZ_CM000736.1/CM000736.1	ACMO01	1	12615	11955	4/30/09	6/15/17	Chromosome	Naval Medical Research Center	SAMN00727647	GCA_000161315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/315/GCA_000161315.1_ASM16131v1	22645259	F65185
Staphylococcus epidermidis APO27	1345000	PRJNA207985	207985	Terrabacteria group	Firmicutes	2.57696	31.9	-	ATCU02	246	2572	2383	7/2/13	3/24/17	Contig	Max-Planck-Institute for Evolutionary Biology	SAMN02470520	GCA_000417945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/945/GCA_000417945.2_APO27_v2	24435862	APO27
Carnobacterium sp. 17-4	208596	PRJNA60607	60607	Terrabacteria group	Firmicutes	2.6854	35.2291	chromosome:NC_015391.1/CP002563.1; plasmid pCAR50:NC_015390.1/CP002564.1	-	2	2593	2463	4/8/11	4/17/17	Complete Genome	Georg-August-University Goettingen	SAMN02603266	GCA_000195575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/575/GCA_000195575.1_ASM19557v1	21551290	17-4
Yersinia pestis	632	PRJNA293978	293978	Proteobacteria	Gammaproteobacteria	4.82587	47.6	-	LIXX01	12	4623	4408	1/10/16	3/27/17	Scaffold	Pacific Northwest National Laboratory	SAMN04012733	GCA_001509865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/865/GCA_001509865.1_ASM150986v1	26599979	Yp1945
Pseudomonas fluorescens	294	PRJNA283459	283459	Proteobacteria	Gammaproteobacteria	6.0834	60.3	-	LCZD01	56	5566	5407	6/5/15	4/3/17	Contig	"University of Michigan, Ann Arbor"	SAMN03650328	GCA_001020865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/865/GCA_001020865.1_ASM102086v1	-	AU5633
Caldicellulosiruptor bescii DSM 6725	521460	PRJNA29407	29407	Terrabacteria group	Firmicutes	2.93166	35.2189	chromosome:NC_012034.1/CP001393.1; plasmid pATHE01:NC_012036.1/CP001394.1; plasmid pATHE02:NC_012037.1/CP001395.1	-	3	2835	2599	2/4/09	9/1/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598462	GCA_000022325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/325/GCA_000022325.1_ASM2232v1	-	DSM 6725
Lactococcus lactis subsp. lactis	1360	PRJNA320710	320710	Terrabacteria group	Firmicutes	2.68042	35.2171	chromosome:NZ_CP015902.1/CP015902.1; plasmid pUC06A:NZ_CP016734.1/CP016734.1; plasmid pUC06B:NZ_CP016735.1/CP016735.1; plasmid pUC06C:NZ_CP016736.1/CP016736.1	-	4	2692	2478	4/4/17	4/6/17	Complete Genome	University College Cork	SAMN04956292	GCA_002078975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/975/GCA_002078975.1_ASM207897v1	28356072	UC06
Carnobacterium inhibens subsp. gilichinskyi	1266845	PRJNA222287	222287	Terrabacteria group	Firmicutes	2.49711	35.2081	chromosome:NC_022606.1/CP006812.1; plasmid pWNCR12:NC_022601.1/CP006813.1; plasmid pWNCR15:NC_022607.1/CP006814.1; plasmid pWNCR47:NC_022602.1/CP006815.1; plasmid pWNCR64:NC_022603.1/CP006816.1; plasmid pWNCR9:NC_022608.1/CP006817.1	-	6	2404	2255	10/29/13	4/9/17	Complete Genome	University of Florida	SAMN02604179	GCA_000493735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/735/GCA_000493735.1_ASM49373v1	24285647	WN1359
Bacillus thuringiensis serovar alesti	1440	PRJNA317856	317856	Terrabacteria group	Firmicutes	5.81812	35.2064	chromosome:NZ_CP015176.1/CP015176.1; plasmid pBMB267:NZ_CP015177.1/CP015177.1; plasmid pBMB4227:NZ_CP015178.1/CP015178.1; plasmid pBMB57:NZ_CP015179.1/CP015179.1; plasmid pBMB71:NZ_CP015180.1/CP015180.1; plasmid pBMB8291:NZ_CP015182.1/CP015182.1; plasmid pBMB9829:NZ_CP015181.1/CP015181.1	-	7	6200	5798	5/9/16	4/5/17	Complete Genome	Huazhong Agricultural University	SAMN04628222	GCA_001640965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/965/GCA_001640965.1_ASM164096v1	-	BGSC 4C1
Chryseobacterium sp. T16E-39	2015076	PRJNA391544	391544	FCB group	Bacteroidetes/Chlorobi group	4.87289	35.2	chromosome:NZ_CP022282.1/CP022282.1	-	1	4432	4289	7/10/17	7/12/17	Complete Genome	Rural development administration	SAMN07270375	GCA_002216065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/065/GCA_002216065.1_ASM221606v1	-	T16E-39
Flavobacterium gilvum	1492737	PRJNA341566	341566	FCB group	Bacteroidetes/Chlorobi group	4.40259	35.2	chromosome:NZ_CP017479.1/CP017479.1	-	1	3580	3476	10/12/16	4/13/17	Complete Genome	Korea University	SAMN05726037	GCA_001761465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/465/GCA_001761465.1_ASM176146v1	-	EM1308
Pseudomonas fluorescens	294	PRJNA283460	283460	Proteobacteria	Gammaproteobacteria	6.20469	58.8	-	LCZE01	64	5680	5473	6/5/15	4/3/17	Contig	"University of Michigan, Ann Arbor"	SAMN03650329	GCA_001020875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/875/GCA_001020875.1_ASM102087v1	-	AU11114
Yersinia pestis subsp. microtus bv. Caucasica	385966	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.565	47.6	-	MIDZ01	186	4429	4061	1/26/17	3/29/17	Scaffold	SRCAMB	SAMN05521422	GCA_001972385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/385/GCA_001972385.1_ASM197238v1	-	SCPM-O-B-7040
Dialister pneumosintes	39950	PRJNA282954	282954	Terrabacteria group	Firmicutes	1.27407	35.2	chromosome:NZ_CP017037.1/CP017037.1	-	1	1260	1171	8/31/16	4/17/17	Complete Genome	The Forsyth Institute	SAMN05413926	GCA_001717505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/505/GCA_001717505.1_ASM171750v1	-	F0677
Staphylococcus epidermidis APO35	1344999	PRJNA207986	207986	Terrabacteria group	Firmicutes	2.55699	31.8	-	ATCV02	263	2512	2361	7/2/13	3/24/17	Contig	Max-Planck-Institute for Evolutionary Biology	SAMN02470527	GCA_000417965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/965/GCA_000417965.2_APO35.v2	24435862	APO35
Bacillus cereus AH603	526990	PRJNA29691	29691	Terrabacteria group	Firmicutes	5.79945	35.1	chromosome:NZ_CM000737.1/CM000737.1	ACMP01	1	12060	11479	4/30/09	6/15/17	Chromosome	Naval Medical Research Center	SAMN00727680	GCA_000161335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/335/GCA_000161335.1_ASM16133v1	22645259	AH603
Lactococcus lactis subsp. lactis	1360	PRJNA294255	294255	Terrabacteria group	Firmicutes	2.4634	34.8	-	LKLJ01	33	2409	2284	12/4/15	4/4/17	Contig	Radboudumc	SAMN04026622	GCA_001456725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/725/GCA_001456725.1_ASM145672v1	-	KF134
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.17713	69.2	-	LMVY01	155	4922	4700	4/4/16	4/5/17	Contig	Robert Koch Institute	SAMN04229410	GCA_001610395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/395/GCA_001610395.1_ASM161039v1	-	MAH-E-104-1
Mycobacterium bovis BCG	33892	PRJEB8560	294541	Terrabacteria group	Actinobacteria	4.31762	65.6	-	CUWQ01	1	4193	3982	9/1/15	4/4/17	Scaffold	KAUST	SAMEA3257676	GCA_001287365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/365/GCA_001287365.1_bcg_Tice	-	Tice
Haemophilus influenzae	727	PRJNA316651	316651	Proteobacteria	Gammaproteobacteria	1.84255	38	-	LVZD01	33	1855	1726	4/14/17	4/21/17	Contig	Genomic Research Laboratory (GRL)	SAMN04590163	GCA_002093205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/205/GCA_002093205.1_ASM209320v1	27756711	GE6
Mycobacterium tuberculosis 1821ADB36	1334077	PRJNA203189	203189	Terrabacteria group	Actinobacteria	4.41153	65.4	chromosome:NZ_CP009199.1/CP009199.1	-	1	4268	4033	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837651	GCA_001997495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/495/GCA_001997495.1_ASM199749v1	27261264	1821ADB36
Lactococcus lactis subsp. lactis	1360	PRJNA267741	267741	Terrabacteria group	Firmicutes	2.4887	35.2	chromosome:NZ_CP010050.1/CP010050.1	-	1	2504	2296	12/23/14	4/2/17	Complete Genome	Institute of Microbiology	SAMN03200076	GCA_000807375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/375/GCA_000807375.1_ASM80737v1	-	S0
Streptococcus pneumoniae	1313	PRJNA229402	229402	Terrabacteria group	Firmicutes	2.10344	39.7	-	JFIT01	308	2218	1960	10/2/14	3/10/17	Scaffold	Harvard Medical School / Massachusetts Eye and Ear Infirmary	SAMN02641369	GCA_000762545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/545/GCA_000762545.1_Sp_1910.v1.0	-	ECC_1910
Bacillus weihenstephanensis	86662	PRJNA258373	258373	Terrabacteria group	Firmicutes	5.60835	35.2	chromosome:NZ_CP009746.1/CP009746.1	-	1	5771	5390	11/13/14	4/2/17	Complete Genome	University of Amsterdam	SAMN03106993	GCA_000775975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/975/GCA_000775975.1_ASM77597v1	25853650	WSBC 10204
Wolbachia endosymbiont of Drosophila simulans wAu	225364	PRJEB6321	263464	Proteobacteria	Alphaproteobacteria	1.26846	35.2	chromosome 1:NZ_LK055284.1/LK055284.1	-	1	1265	1099	10/8/14	9/13/17	Complete Genome	WTSI	SAMEA2555295	GCA_000953315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/315/GCA_000953315.1_Wau001	25341639	-
Streptococcus pyogenes ABC020048184	1439170	PRJNA233283	233283	Terrabacteria group	Firmicutes	1.79508	38.5	-	JJFG01	7	1814	1682	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567632	GCA_000629745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/745/GCA_000629745.1_Stre_pyog_ABC020048184_V1	-	ABC020048184
Leptospira interrogans serovar Copenhageni str. Fiocruz LV4108	1291325	PRJNA188989	188989	Spirochaetes	Spirochaetia	4.61956	35	-	AOWB01	127	4129	3750	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920570	GCA_000342825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/825/GCA_000342825.1_CA_glsol094	-	Fiocruz LV4108
Pseudomonas putida	303	PRJNA311932	311932	Proteobacteria	Gammaproteobacteria	6.49084	61.6	-	LSUZ01	246	6193	5882	5/31/16	4/5/17	Scaffold	National Institute of Health Dr Ricardo Jorge	SAMN04497997	GCA_001653615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/615/GCA_001653615.1_ASM165361v1	-	INSali382
Bacillus anthracis str. Carbosap	1245029	PRJNA231912	231912	Terrabacteria group	Firmicutes	5.40767	35.1	-	JPIG01	18	6033	5637	7/18/14	3/24/17	Scaffold	Army Medical and Veterinary Research Center	SAMN02910129	GCA_000732465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/465/GCA_000732465.1_ASM73246v1	-	Carbosap
Shigella flexneri	623	PRJNA315925	315925	Proteobacteria	Gammaproteobacteria	4.40757	50.7	-	LVIX01	399	4958	4124	5/20/16	2/25/17	Contig	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04570192	GCA_001649175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/175/GCA_001649175.1_ASM164917v1	-	SH4s05
Bifidobacterium longum	216816	PRJEB18553	373869	Terrabacteria group	Actinobacteria	2.57939	59.7	-	FTRG01	48	2375	2108	2/8/17	4/6/17	Contig	University of Tromso	SAMEA51817918	GCA_900157085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/085/GCA_900157085.1_Bifido_04_v1	-	-
Riemerella anatipestifer CH3	1354240	PRJNA210740	210740	FCB group	Bacteroidetes/Chlorobi group	2.23448	35.2	chromosome:NZ_CP006649.1/CP006649.1	-	1	2119	1971	7/28/14	4/2/17	Complete Genome	"Shanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences"	SAMN03081473	GCA_000734055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/734/055/GCA_000734055.1_ASM73405v1	25700418	CH3
Candidatus Liberibacter solanacearum CLso-ZC1	658172	PRJNA39273	39273	Proteobacteria	Alphaproteobacteria	1.25828	35.2	chromosome:NC_014774.1/CP002371.1	-	1	1168	1048	12/3/10	4/17/17	Complete Genome	"USDA, ARS"	SAMN02604277	GCA_000183665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/665/GCA_000183665.1_ASM18366v1	21552483	CLso-ZC1
Streptococcus agalactiae	1311	PRJNA273437	273437	Terrabacteria group	Firmicutes	2.11144	35.6	-	LKPA01	3	2170	2041	8/22/16	3/20/17	Scaffold	Lanzhou Institute of Husbandry and Pharmaceutical Science of CAAS	SAMN03292190	GCA_001708205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/205/GCA_001708205.1_ASM170820v1	-	M19
Streptococcus suis 88-5299A	1214170	PRJNA171445	171445	Terrabacteria group	Firmicutes	2.33337	41.3	-	ALLX01	104	2336	2204	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469526	GCA_000440895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/895/GCA_000440895.1_version1	-	88-5299A
Pseudomonas syringae pv. pisi str. PP1	1357292	PRJNA211606	211606	Proteobacteria	Gammaproteobacteria	5.94952	58.8	-	AUZR02	256	5480	5139	8/20/13	3/24/17	Contig	University of Arizona	SAMN02471574	GCA_000452445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/445/GCA_000452445.2_PpiPP1_130925_2.0	-	PP1
Vibrio vulnificus	672	PRJNA297594	297594	Proteobacteria	Gammaproteobacteria	4.89991	46.9	-	LKUU01	89	4593	4230	12/5/16	4/6/17	Scaffold	Exeter University	SAMN04125838	GCA_001889185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/185/GCA_001889185.1_ASM188918v1	27798649	S2-22
Legionella pneumophila subsp. pneumophila	91891	PRJNA239272	239272	Proteobacteria	Gammaproteobacteria	3.47076	38.2	-	JFIE01	58	3171	3020	3/7/14	3/24/17	Scaffold	Beijing Institute of Microbiology and Epidemiology	SAMN02650975	GCA_000586155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/155/GCA_000586155.1_ATCC_43130	-	ATCC 43130
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.44053	50.9	-	LYEA01	417	4854	4181	7/20/16	6/12/17	Contig	California Department of Public Health	SAMN04440977	GCA_001688385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/385/GCA_001688385.1_ASM168838v1	28028547	CDPH_C96
Bacteroides fragilis str. 1007-1-F #7	1339292	PRJNA206135	206135	FCB group	Bacteroidetes/Chlorobi group	5.55295	43.2	-	JGDL01	130	5069	4711	3/20/14	4/4/17	Contig	IGS	SAMN02314431	GCA_000599145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/145/GCA_000599145.2_ASM59914v2	-	1007-1-F #7
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.26421	38.6	-	NGPR01	142	2306	2084	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848387	GCA_002253925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/925/GCA_002253925.1_ASM225392v1	-	107k
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.05888	67.1	-	MURI01	153	7687	7194	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001845	GCA_001991655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/655/GCA_001991655.1_ASM199165v1	-	VC10878
Sulfurimonas autotrophica DSM 16294	563040	PRJNA31347	31347	Proteobacteria	delta/epsilon subdivisions	2.1532	35.2	chromosome:NC_014506.1/CP002205.1	-	1	2204	2140	9/15/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713560	GCA_000147355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/355/GCA_000147355.1_ASM14735v1	21304749	DSM 16294
Caldicellulosiruptor obsidiansis OB47	608506	PRJNA40355	40355	Terrabacteria group	Firmicutes	2.53234	35.2	chromosome:NC_014392.1/CP002164.1	-	1	2369	2167	8/11/10	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713559	GCA_000145215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/215/GCA_000145215.1_ASM14521v1	20851897	OB47
Bacillus thuringiensis	1428	PRJNA260744	260744	Terrabacteria group	Firmicutes	5.56608	35.2	-	JYCH01	81	5996	5724	3/5/15	4/3/17	Contig	Los Alamos National Laboratory	SAMN03025782	GCA_000948325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/325/GCA_000948325.1_BFA_6_A	-	Lr3/2
Ralstonia solanacearum	305	PRJNA286126	286126	Proteobacteria	Betaproteobacteria	5.73693	67	-	LFJP01	222	5076	4829	5/17/16	4/5/17	Scaffold	University of Wisconsin Madison	SAMN03765174	GCA_001645725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/725/GCA_001645725.1_ASM164572v1	-	UW757
Vibrio cholerae CP1047(20)	991995	PRJNA63997	63997	Proteobacteria	Gammaproteobacteria	4.03978	47.4	-	ALDI01	123	3889	3669	7/18/12	3/23/17	Scaffold	Institute for Genome Sciences	SAMN00622046	GCA_000279785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/785/GCA_000279785.1_ASM27978v1	-	CP1047(20)
Clostridioides difficile DA00189	1151338	PRJNA85851	85851	Terrabacteria group	Firmicutes	4.09354	28.3	-	AVJM01	111	3861	3626	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766653	GCA_000448805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/805/GCA_000448805.2_ASM44880v2	-	DA00189
Shigella boydii 3594-74	766139	PRJNA49057	49057	Proteobacteria	Gammaproteobacteria	4.66221	51.1	-	AFGC01	106	5208	5068	5/4/11	2/28/12	Contig	Institute for Genome Sciences	SAMN00792437	GCA_000211955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/211/955/GCA_000211955.2_ASM21195v2	-	3594-74
Francisella tularensis subsp. tularensis 80700069	1292391	PRJNA189049	189049	Proteobacteria	Gammaproteobacteria	1.81532	32.3	-	APKV01	17	1878	1587	4/23/13	4/1/17	Contig	Dugway Proving Ground	SAMN02469751	GCA_000380445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/380/445/GCA_000380445.1_H647_1.0	-	80700069
Brucella abortus 84/26	1169215	PRJNA173501	173501	Proteobacteria	Alphaproteobacteria	3.3058	57.2	-	AQJI01	4	3403	3155	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00839698	GCA_000370265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/265/GCA_000370265.1_Bruc_abor_84_26_V1	-	84/26
Xanthomonas axonopodis pv. malvacearum str. GSPB2388	1127439	PRJNA79081	79081	Proteobacteria	Gammaproteobacteria	5.11784	64.5	-	AHIC01	61	4572	4162	11/5/12	6/15/17	Contig	"Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresources /Institute of Bioscience and Technology, College of Agriculture, Hainan University"	SAMN02469611	GCA_000309925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/925/GCA_000309925.1_ASM30992v1	-	GSPB22388
Xanthomonas oryzae pv. oryzae	64187	PRJNA269444	269444	Proteobacteria	Gammaproteobacteria	4.314	63.9	-	JXFO01	424	4326	3460	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252554	GCA_001928005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/005/GCA_001928005.1_ASM192800v1	-	IXO74
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.00001	38	-	MLLM01	537	2167	1793	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297026	GCA_001867615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/615/GCA_001867615.1_ASM186761v1	27118061	AWRIB148
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.15197	45.2	-	LRFO01	42	4956	4704	4/4/16	3/19/17	Scaffold	Health Canada	SAMN04422014	GCA_001608705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/705/GCA_001608705.1_ASM160870v1	-	A0EZ713
Bacillus subtilis subsp. subtilis str. 168	224308	PRJNA29889	29889	Terrabacteria group	Firmicutes	4.21455	43.5	chromosome:NZ_CM000487.1/CM000487.1	ABQK01	1	4426	4142	7/23/08	5/18/17	Chromosome	Baylor College of Medicine	SAMN02469327	GCA_000155325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/325/GCA_000155325.1_ASM15532v1	18670626	168
Wolbachia sp. wRi	66084	PRJNA33273	33273	Proteobacteria	Alphaproteobacteria	1.44587	35.2	chromosome:NC_012416.1/CP001391.1	-	1	1403	1254	3/24/09	8/21/17	Complete Genome	"Dept. of Molecular Evolution, Evolutionary"	SAMN02603205	GCA_000022285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/285/GCA_000022285.1_ASM2228v1	19307581	wRi
Clostridium botulinum F 357	1379741	PRJNA213614	213614	Terrabacteria group	Firmicutes	3.83212	27.9918	plasmid p_F_357:NZ_AUZC01000015.1/AUZC01000015.1	AUZC01	15	3706	3494	6/24/14	3/24/17	Contig	Army Medical and Veterinary Research Center	SAMN02869844	GCA_000711105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/105/GCA_000711105.1_F_357	26341861	F 357
Enterococcus faecalis S613	699185	PRJNA42525	42525	Terrabacteria group	Firmicutes	3.04735	37.3	-	ADDP01	105	3124	2976	1/27/10	3/22/17	Scaffold	Wash U	SAMN00189102	GCA_000163795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/795/GCA_000163795.1_ASM16379v1	-	S613
Streptococcus mutans TCI-30	1074190	PRJNA72115	72115	Terrabacteria group	Firmicutes	1.88003	36.8	-	AGMN01	103	1883	1782	10/6/11	3/22/17	Contig	JCVI	SAMN02436612	GCA_000229965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/965/GCA_000229965.2_SMUT3-NEX_6-30	-	TCI-30
Neisseria gonorrhoeae GC1-182	1352532	PRJNA209310	209310	Proteobacteria	Betaproteobacteria	2.11449	52.6	-	ATPD01	464	2479	2102	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02338408	GCA_001026545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/545/GCA_001026545.1_ASM102654v1	-	GC1-182
Enterococcus faecium ERV69	1134826	PRJNA82041	82041	Terrabacteria group	Firmicutes	2.97714	38	-	AMAR01	171	3050	2910	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299501	GCA_000295195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/195/GCA_000295195.2_ASM29519v2	-	ERV69
Stenotrophomonas maltophilia	40324	PRJNA323803	323803	Proteobacteria	Gammaproteobacteria	4.5953	66.5	-	LYVK01	77	4213	4095	6/24/16	4/5/17	Contig	"UMR5557, University of Lyon"	SAMN05189120	GCA_001676375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/375/GCA_001676375.1_ASM167637v1	-	SmF3
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.13003	41.2	-	CWDN01	81	2053	1886	6/24/15	3/26/17	Contig	SC	SAMEA1032826	GCA_001176225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/225/GCA_001176225.1_6903_7_27	-	EQUI0172
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.38758	40.2	-	LQDY01	38	2291	2187	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366520	GCA_001929565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/565/GCA_001929565.1_ASM192956v1	-	2403PM
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.88564	46.7	-	JTHQ01	108	2977	2707	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196641	GCA_001656785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/785/GCA_001656785.1_ASM165678v1	-	Lrh9
Brucella melitensis F1/06 B10	1160219	PRJNA173579	173579	Proteobacteria	Alphaproteobacteria	3.29686	57.2	-	AQKB01	9	3378	3143	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN00811208	GCA_000370645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/645/GCA_000370645.1_Bruc_meli_F1_06_B10_V1	-	F1/06 B10
Wolbachia endosymbiont of Drosophila melanogaster	163164	PRJNA272	272	Proteobacteria	Alphaproteobacteria	1.26778	35.2	chromosome:NC_002978.6/AE017196.1	-	1	1266	1103	1/16/02	4/6/17	Complete Genome	TIGR	SAMN02604000	GCA_000008025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/025/GCA_000008025.1_ASM802v1	15024419	wMel
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.43517	53.6	-	NDHN01	36	2355	2171	4/28/17	5/3/17	Contig	Institute for Medical Research	SAMN06311217	GCA_002115155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/155/GCA_002115155.1_ASM211515v1	-	rz600
Mycoplasma pneumoniae	2104	PRJNA291007	291007	Terrabacteria group	Tenericutes	0.820447	40	-	LHQB01	13	811	691	9/22/15	4/4/17	Scaffold	Centre for genomic regulation (CRG)	SAMN03897312	GCA_001296685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/685/GCA_001296685.1_ASM129668v1	26335586	Mympn_5393
Yersinia enterocolitica	630	PRJEB13626	384942	Proteobacteria	Gammaproteobacteria	4.42731	47	-	FKKQ01	151	4222	3871	5/1/17	5/9/17	Contig	IP	SAMEA3935399	GCA_900079935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/935/GCA_900079935.1_IP35472	-	-
Serratia marcescens	615	PRJNA307050	307050	Proteobacteria	Gammaproteobacteria	5.11517	59.7	-	LQAK01	20	4882	4620	3/21/16	8/12/17	Contig	Argonne national Lab	SAMN04370967	GCA_001594385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/385/GCA_001594385.1_ASM159438v1	-	ICU1-2a
Lactobacillus plantarum	1590	PRJNA287726	287726	Terrabacteria group	Firmicutes	3.20477	45	-	LGIM01	101	3220	2931	8/21/15	3/26/17	Contig	Seoul National University	SAMN03785547	GCA_001273585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/585/GCA_001273585.1_ASM127358v1	26450744	SNU.Lp177
Campylobacter coli H56	887312	PRJNA52761	52761	Proteobacteria	delta/epsilon subdivisions	1.73689	31.3	-	AINW01	134	1824	1720	3/16/12	3/15/17	Contig	Cornell University	SAMN02429065	GCA_000254215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/215/GCA_000254215.2_ASM25421v2	-	H56
Burkholderia sp. MSMB1835	1637876	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.15951	67.2	-	LOYP01	62	6622	6307	1/22/16	4/11/17	Contig	Northern Arizona University	SAMN03449299	GCA_001526365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/365/GCA_001526365.1_ASM152636v1	-	MSMB1835
Propionibacterium acnes HL027PA1	765111	PRJNA49257	49257	Terrabacteria group	Actinobacteria	2.5216	60.1	-	ADXX01	55	2558	2411	8/5/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189204	GCA_000145455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/455/GCA_000145455.1_ASM14545v1	-	HL027PA1
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.46355	32.7	-	CUGN01	61	2429	2331	3/31/15	3/26/17	Contig	SC	SAMEA1035131	GCA_001235685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/685/GCA_001235685.1_7068_7_44	-	112622
Proteus mirabilis	584	PRJNA284652	284652	Proteobacteria	Gammaproteobacteria	3.0377	39.3	-	LDIU01	1796	3328	2616	6/15/15	12/23/15	Contig	Aljouf university	SAMN03704961	GCA_001028125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/125/GCA_001028125.1_ASM102812v1	26697338	SAS71
Enterobacter cloacae	550	PRJNA273275	273275	Proteobacteria	Gammaproteobacteria	4.91061	54.2	-	JXWK01	1341	5567	4358	3/6/15	3/25/17	Contig	Canadian Food Inspection Agency	SAMN03292329	GCA_000948685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/685/GCA_000948685.1_ASM94868v1	-	OLC-1682
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.79286	55.5	-	FKZC01	30	4650	4444	5/19/16	2/21/17	Scaffold	SC	SAMEA2273864	GCA_900083845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/845/GCA_900083845.1_12045_7_95	-	2880STDY5682790
Cronobacter sakazakii	28141	PRJNA329459	329459	Proteobacteria	Gammaproteobacteria	4.54137	57.2	-	MBRX01	450	4288	4055	4/17/17	4/21/17	Contig	Guangdong Institute of Microbiology	SAMN05413001	GCA_002094645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/645/GCA_002094645.1_ASM209464v1	28057934	cro1537W
Lactobacillus salivarius	1624	PRJNA357984	357984	Terrabacteria group	Firmicutes	1.93069	33	-	MSCR01	59	1908	1798	4/5/17	4/8/17	Scaffold	University College Cork	SAMN06163248	GCA_002079905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/905/GCA_002079905.1_ASM207990v1	-	01M14315
Mycobacterium abscessus 4S-0303	1001722	PRJNA65173	65173	Terrabacteria group	Actinobacteria	4.86428	64.2	-	AKTU01	8	4851	4746	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00728581	GCA_000271125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/125/GCA_000271125.1_ASM27112v1	-	4S-0303
Vibrio sp. 624788	1234362	PRJNA175394	175394	Proteobacteria	Gammaproteobacteria	5.4679	44.4	-	ANBW01	400	-	-	12/4/12	1/8/14	Contig	San Diego State University	SAMN02470877	GCA_000316985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/985/GCA_000316985.1_Draft	-	624788
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.20126	63	-	DCLX01	43	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456998	GCA_002321815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/815/GCA_002321815.1_ASM232181v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.53417	67.4	-	LPBV01	111	6890	6517	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449384	GCA_001527085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/085/GCA_001527085.1_ASM152708v1	-	MSMB2006WGS
Pseudoalteromonas sp. DSM 26666	1761892	PRJEB17564	352009	Proteobacteria	Gammaproteobacteria	4.0241	40.2	-	FPAR01	19	3641	3523	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487870	GCA_900116475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/475/GCA_900116475.1_IMG-taxon_2619619023_annotated_assembly	-	DSM 26666
Corynebacterium pseudotuberculosis	1719	PRJNA256958	256958	Terrabacteria group	Actinobacteria	2.35525	52.1	-	MCNY01	4	2175	1843	1/23/17	4/10/17	Contig	Federal University of Para	SAMN05509281	GCA_001969085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/085/GCA_001969085.1_ASM196908v1	-	MB295
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	3.87457	38.8	-	MDIQ01	585	3997	3534	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022875	GCA_001706305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/305/GCA_001706305.1_ASM170630v1	-	UKK-0552
Citrobacter freundii	546	PRJNA335557	335557	Proteobacteria	Gammaproteobacteria	5.48136	51.7	-	MDCW01	225	5533	5225	11/17/16	4/5/17	Contig	Hospital Universitary 12 de octubre	SAMN05447747	GCA_001880945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/945/GCA_001880945.1_ASM188094v1	-	CF_11_ST_64
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.95207	55.2	-	LAAK01	81	4905	4664	3/19/15	3/25/17	Contig	JCVI	SAMN03283624	GCA_000957625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/625/GCA_000957625.1_ASM95762v1	-	34986
Klebsiella aerogenes	548	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.14784	55.1	-	JVVQ01	225	5012	4802	7/10/15	4/6/17	Contig	University of Washington	SAMN03197252	GCA_001054315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/315/GCA_001054315.1_ASM105431v1	26230489	1281_EAER
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.93999	64.1	-	FVDQ01	11	4882	4720	3/10/17	3/18/17	Scaffold	SC	SAMEA2259601	GCA_900131835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/835/GCA_900131835.1_11861_7_61	-	796
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.37999	66.8	-	LPEV01	69	7792	7424	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449469	GCA_001530055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/055/GCA_001530055.1_ASM153005v1	-	MSMB1332WGS
Pseudomonas sp. Root401	1736526	PRJNA297942	297942	Proteobacteria	Gammaproteobacteria	7.02955	60.5	-	LMDO01	66	6321	6094	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155795	GCA_001425105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/105/GCA_001425105.1_Root401	26633631	Root401
Streptomyces sp. TAA486	1298880	PRJNA190864	190864	Terrabacteria group	Actinobacteria	7.06945	70.1	-	AUEV01	36	6167	5892	7/10/13	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02440637	GCA_000426165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/165/GCA_000426165.1_ASM42616v1	-	TAA486
Bacillus sp. FJAT-20673	1830326	PRJNA318160	318160	Terrabacteria group	Firmicutes	5.71388	40.3	-	LWJH01	4	5487	5222	5/3/16	4/12/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04633519	GCA_001636485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/485/GCA_001636485.1_ASM163648v1	-	FJAT-20673
Acinetobacter sp. MDS7A	1209355	PRJNA186610	186610	Proteobacteria	Gammaproteobacteria	2.96728	41	-	AOTJ01	141	2924	2499	5/1/13	4/17/17	Contig	West bengal University of Technology	SAMN02472123	GCA_000386005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/005/GCA_000386005.1_Ac7Aver1	23814111	MDS7A
Clostridium sp. Marseille-P299	1805477	PRJEB13107	315742	Terrabacteria group	Firmicutes	4.59995	33.2	-	FJVE01	7	3949	3837	3/23/16	4/12/17	Contig	URMITE	SAMEA3904493	GCA_900078195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/195/GCA_900078195.1_PRJEB13107	-	Marseille-P299
Sphingomonas sp. Leaf339	1736343	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	3.91158	64.7	-	LMRS01	61	3640	3511	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151733	GCA_001426195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/195/GCA_001426195.1_Leaf339	26633631	Leaf339
Rhodococcus sp. Leaf7	1736210	PRJNA297956	297956	Terrabacteria group	Actinobacteria	4.53688	67.1	-	LMRI01	7	4244	4120	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151576	GCA_001425985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/985/GCA_001425985.1_Leaf7	26633631	Leaf7
Enterobacter sp. FB	1571816	PRJNA266747	266747	Proteobacteria	Gammaproteobacteria	4.98103	56	-	JSZC01	18	4927	4604	12/19/14	4/20/17	Contig	Chengdu Military General Hospital	SAMN03174119	GCA_000805795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/795/GCA_000805795.1_ASM80579v1	-	FB
Staphylococcus sp. HMSC073E10	1739426	PRJNA300076	300076	Terrabacteria group	Firmicutes	2.4907	31.9	-	LTWJ01	72	2474	2351	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480349	GCA_001813585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/585/GCA_001813585.1_ASM181358v1	-	HMSC073E10
Corynebacterium sp. HMSC078H07	1739379	PRJNA300029	300029	Terrabacteria group	Actinobacteria	2.76806	59.8	-	LTXU01	89	2626	2480	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480043	GCA_001812805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/805/GCA_001812805.1_ASM181280v1	-	HMSC078H07
Arthrobacter sp. EpRS66	1743140	PRJNA299357	299357	Terrabacteria group	Actinobacteria	3.70771	59.6	-	LNUU01	2	3499	3398	1/12/16	4/11/17	Scaffold	University of Florence	SAMN04198240	GCA_001512275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/275/GCA_001512275.1_ASM151227v1	-	EpRS66
Bradyrhizobium sp. Ghvi	1855319	PRJEB17157	351373	Proteobacteria	Alphaproteobacteria	7.92567	63	-	FOVU01	41	7536	7137	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216330	GCA_900115265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/265/GCA_900115265.1_IMG-taxon_2651870122_annotated_assembly	-	Ghvi
Streptococcus sp. HMSC067A03	1739467	PRJNA300117	300117	Terrabacteria group	Firmicutes	1.80495	37.8	-	LTVC01	45	1784	1674	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480386	GCA_001814295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/295/GCA_001814295.1_ASM181429v1	-	HMSC067A03
Mycobacterium sp. GA-1683	1772280	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.23934	66.8	-	LQIQ01	60	5013	4872	1/6/16	4/11/17	Contig	JCVI	SAMN04349497	GCA_001500085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/500/085/GCA_001500085.1_ASM150008v1	-	GA-1683
Prevotella sp. CAG:520	1262929	PRJEB915	206701	FCB group	Bacteroidetes/Chlorobi group	2.76159	51	-	CBCY01	122	2221	2171	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138635	GCA_000434975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/975/GCA_000434975.1_MGS520	-	-
Enterococcus sp. 3G1_DIV0629	1834176	PRJNA313452	313452	Terrabacteria group	Firmicutes	3.1894	37.9	-	NGLI01	11	3194	2975	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634015	GCA_002141285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/285/GCA_002141285.1_ASM214128v1	-	3G1_DIV0629
Paenibacillus sp. P32E	1349434	PRJNA316723	316723	Terrabacteria group	Firmicutes	6.92152	49.6	-	LVYY01	77	6125	5816	12/19/16	4/16/17	Contig	INCT - Núcleo de Microbiologia Agrícola	SAMN04589846	GCA_001909085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/085/GCA_001909085.1_ASM190908v1	-	P32E
Ruminococcus sp. UBA4275	1947423	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.31995	53.7	-	DGVV01	190	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452403	GCA_002395085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/085/GCA_002395085.1_ASM239508v1	28894102	-
Bacteroides sp. 43_108	1896974	PRJNA321218	321218	FCB group	Bacteroidetes/Chlorobi group	5.01299	43.2	-	MNQS01	221	4088	3807	12/23/16	12/23/16	Scaffold	None	SAMN05717224	GCA_001915545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/545/GCA_001915545.1_ASM191554v1	27819664	-
Prochlorococcus sp. scB245a_521N3	1471529	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.621899	31.6	-	JFOB01	442	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671400	GCA_000634575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/575/GCA_000634575.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. P0227	1895618	PRJNA341036	341036	Proteobacteria	delta/epsilon subdivisions	1.62788	33.4	-	MJKW01	15	1678	1594	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687056	GCA_002138865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/865/GCA_002138865.1_ASM213886v1	28854596	P0227
Rhizobium sp. N4311	1703972	PRJNA293118	293118	Proteobacteria	Alphaproteobacteria	6.92907	61.4329	plasmid pRspN4311a:NZ_CM008157.1/CM008157.1; plasmid pRspN4311b:NZ_CM008158.1/CM008158.1; plasmid pRspN4311c:NZ_CM008159.1/CM008159.1; plasmid pRspN4311d:NZ_CM008160.1/CM008160.1; plasmid pRspN4311e:NZ_CM008161.1/CM008161.1	LOID01	7	6735	6369	8/9/17	8/16/17	Contig	Centro de Ciencias Genomicas UNAM	SAMN03998649	GCA_002245285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/285/GCA_002245285.1_ASM224528v1	-	N4311
Mesorhizobium sp. URHB0007	1380351	PRJNA213788	213788	Proteobacteria	Alphaproteobacteria	6.06951	62.7	-	JIAO01	20	5894	5638	4/8/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02743912	GCA_000688055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/055/GCA_000688055.1_ASM68805v1	-	URHB0007
Microbacterium sp. 77mftsu3.1	1761802	PRJEB15909	348222	Terrabacteria group	Actinobacteria	3.45567	69.6	-	FNCR01	10	3528	3426	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488590	GCA_900100525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/525/GCA_900100525.1_IMG-taxon_2639762631_annotated_assembly	-	77MFTsu3.1
Bacillus velezensis	492670	PRJNA379527	379527	Terrabacteria group	Firmicutes	3.92408	46.6	-	NBMQ01	34	3895	3719	4/10/17	4/13/17	Contig	University of Neuchatel	SAMN06611069	GCA_002082415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/415/GCA_002082415.1_ASM208241v1	-	SSBW-2
Gilliamella apicola	1196095	PRJNA239649	239649	Proteobacteria	Gammaproteobacteria	2.26099	34.4	-	JFON01	61	2062	1907	7/24/14	4/2/17	Scaffold	Yale University	SAMN02676578	GCA_000733115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/115/GCA_000733115.1_GilApiwkB11v1.0	25053814	wkB11
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.64297	57.4	-	FXON01	106	5723	5364	4/28/17	5/6/17	Scaffold	SC	SAMEA2609441	GCA_900181155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/155/GCA_900181155.1_14936_3_5	-	3189STDY5864762
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.7285	32.3	-	FQRW01	19	2691	2521	11/25/16	4/6/17	Contig	SC	SAMEA3449131	GCA_900128385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/385/GCA_900128385.1_17175_3_75	-	3688STDY6125129
Xanthomonas phaseoli pv. phaseoli	317013	PRJNA266873	266873	Proteobacteria	Gammaproteobacteria	5.0883	64.9	-	JTCT02	162	4596	4084	11/21/14	4/3/17	Contig	University of Exeter	SAMN03175008	GCA_000785925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/925/GCA_000785925.2_NCPPB1646v2	26500625	NCPPB 1646
Xanthomonas phaseoli pv. phaseoli	317013	PRJNA266888	266888	Proteobacteria	Gammaproteobacteria	5.17493	64.9	-	JTCV02	165	4702	4156	11/21/14	4/11/17	Contig	University of Exeter	SAMN03175025	GCA_000785935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/935/GCA_000785935.2_NCPPB1420v2	26500625	NCPPB 1420
Staphylococcus argenteus	985002	PRJEB20633	390605	Terrabacteria group	Firmicutes	2.78388	32.3	-	FXVS01	82	2762	2574	6/15/17	7/5/17	Contig	Geogentics	SAMEA104034175	GCA_900183785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/785/GCA_900183785.1_H2179	-	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.58579	57.5	-	FXPB01	82	5607	5299	4/28/17	5/6/17	Scaffold	SC	SAMEA2609445	GCA_900181185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/185/GCA_900181185.1_14936_3_7	-	3189STDY5864764
Gilliamella apicola SCGC AB-598-B02	1445513	PRJNA233649	233649	Proteobacteria	Gammaproteobacteria	1.80804	33.7	-	JAIM01	544	2097	2062	7/14/14	7/14/14	Contig	Yale University	SAMN02570576	GCA_000725165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/165/GCA_000725165.1_sag_g1_b02_noCtrl	25210772	-
Bacillus velezensis	492670	PRJNA379527	379527	Terrabacteria group	Firmicutes	3.93708	46.6	-	NBMO01	46	3906	3730	4/10/17	4/13/17	Contig	University of Neuchatel	SAMN06611071	GCA_002082435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/435/GCA_002082435.1_ASM208243v1	-	SSBW-10
Microbacterium sp. cf332	1761804	PRJEB15820	347760	Terrabacteria group	Actinobacteria	3.26966	70.7	-	FNKN01	8	3092	3002	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487847	GCA_900102175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/175/GCA_900102175.1_IMG-taxon_2609459766_annotated_assembly	-	CF332
Mesorhizobium sp. F7	1574409	PRJNA267754	267754	Proteobacteria	Alphaproteobacteria	8.78712	66.4	-	JTGD01	146	8467	8195	12/8/14	4/10/17	Contig	University of Malaya	SAMN03200164	GCA_000798645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/645/GCA_000798645.1_ASM79864v1	25177734	F7
Rhizobium sp. 9140	1761900	PRJEB12811	312805	Proteobacteria	Alphaproteobacteria	5.42894	62.5	-	FJUR01	7	5139	4868	3/20/16	7/29/17	Contig	DOE - Joint Genome Institute	SAMN04490368	GCA_900067135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/067/135/GCA_900067135.1_IMG-taxon_2602042090_annotated_assembly	-	9140
Campylobacter sp. P0209	1895616	PRJNA341034	341034	Proteobacteria	delta/epsilon subdivisions	1.63198	33.6	-	MJKU01	14	1701	1622	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687054	GCA_002138895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/895/GCA_002138895.1_ASM213889v1	28854596	P0209
Prochlorococcus sp. scB245a_521O23	1471532	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.89544	31.7	-	JFOE01	346	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671403	GCA_000634595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/595/GCA_000634595.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Bacteroides sp. CAG:1060_57_27	1896975	PRJNA321218	321218	FCB group	Bacteroidetes/Chlorobi group	1.91741	57.1	-	MNQT01	27	1654	1577	12/23/16	12/23/16	Scaffold	None	SAMN05717225	GCA_001915575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/575/GCA_001915575.1_ASM191557v1	27819664	-
Ruminococcus sp. UBA4240	1947422	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.26552	51.5	-	DGXE01	83	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455947	GCA_002395525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/525/GCA_002395525.1_ASM239552v1	28894102	-
Paenibacillus sp. P46E	1349436	PRJNA316725	316725	Terrabacteria group	Firmicutes	7.22163	49.5	-	LVYZ01	120	6286	5995	12/19/16	4/16/17	Contig	INCT - Núcleo de Microbiologia Agrícola	SAMN04589848	GCA_001909095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/095/GCA_001909095.1_ASM190909v1	-	P46E
Enterococcus sp. 7F3_DIV0205	1834189	PRJNA313452	313452	Terrabacteria group	Firmicutes	3.8224	36.2	-	NGKX01	4	3545	3411	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634020	GCA_002141365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/365/GCA_002141365.1_ASM214136v1	-	7F3_DIV0205
Prevotella sp. CAG:1320	1262922	PRJEB711	206607	FCB group	Bacteroidetes/Chlorobi group	2.36922	51	-	CBCU01	66	2079	2035	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138668	GCA_000435635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/635/GCA_000435635.1_MGS1320	-	-
Mycobacterium sp. GA-1379	1772279	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.19059	66.9	-	LQIP01	57	4944	4798	1/6/16	4/11/17	Contig	JCVI	SAMN04349496	GCA_001500105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/500/105/GCA_001500105.1_ASM150010v1	-	GA-1379
Streptococcus sp. HMSC065G04	1739472	PRJNA300122	300122	Terrabacteria group	Firmicutes	2.05131	35.3	-	LTUX01	55	2110	2019	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480392	GCA_001814385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/385/GCA_001814385.1_ASM181438v1	-	HMSC065G04
Bradyrhizobium sp. DFCI-1	1230476	PRJNA174084	174084	Proteobacteria	Alphaproteobacteria	7.64615	64.4	-	AMFB01	89	7164	7112	9/6/13	9/9/13	Scaffold	Broad Institute	SAMN01893863	GCA_000465325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/325/GCA_000465325.1_Brad_ente_CordColits_V1	23924002	-
Arthrobacter sp. EpRS71	1743141	PRJNA299357	299357	Terrabacteria group	Actinobacteria	4.84945	62.2	-	LNUV01	10	4546	4385	1/12/16	4/11/17	Scaffold	University of Florence	SAMN04215161	GCA_001512285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/285/GCA_001512285.1_ASM151228v1	-	EpRS71
Corynebacterium sp. HMSC065H09	1739382	PRJNA300032	300032	Terrabacteria group	Actinobacteria	2.4932	58.9	-	LTXS01	36	2189	2106	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480046	GCA_001812845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/845/GCA_001812845.1_ASM181284v1	-	HMSC065H09
Staphylococcus sp. HMSC068C09	1739434	PRJNA300084	300084	Terrabacteria group	Firmicutes	2.23108	31.4	-	LTWC01	73	2224	2104	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480356	GCA_001813735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/735/GCA_001813735.1_ASM181373v1	-	HMSC068C09
Enterobacter sp. Bisph1	1274399	PRJNA270812	270812	Proteobacteria	Gammaproteobacteria	4.57846	53.6	-	JXAG01	54	4379	4163	1/6/15	4/10/17	Contig	"faculte de medecine, Aix-Marseille Universite"	SAMN03271816	GCA_000814905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/905/GCA_000814905.1_ASM81490v1	-	Bisph1
Rhodococcus sp. SC4	1793160	PRJNA272922	272922	Terrabacteria group	Actinobacteria	10.5719	66.7	-	LSBM01	345	9793	9118	2/9/16	4/12/17	Scaffold	University of East Anglia	SAMN04448250	GCA_001555475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/475/GCA_001555475.1_ASM155547v1	-	SC4
Sphingomonas sp. WG	1592629	PRJNA302347	302347	Proteobacteria	Alphaproteobacteria	4.039	65.9	-	LNOS01	107	3763	3636	12/18/15	4/11/17	Contig	China University of Petroleum (East China)	SAMN04272329	GCA_001469845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/845/GCA_001469845.1_ASM146984v1	26868397	WG
Clostridium sp. Marseille-P2538	1816694	PRJEB13961	321278	Terrabacteria group	Firmicutes	4.14415	49.3	-	FLKL01	2	3893	3754	5/18/16	4/12/17	Contig	URMITE	SAMEA3982630	GCA_900086625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/625/GCA_900086625.1_PRJEB13961	-	Marseille-P2538
Acinetobacter sp. COS3	1397525	PRJNA217943	217943	Proteobacteria	Gammaproteobacteria	3.44029	39	-	AXCD01	80	3277	3108	10/21/13	4/6/17	Contig	University of Illinois at Chicago	SAMN02345639	GCA_000475335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/335/GCA_000475335.1_De_Novo_assembly	24356826	COS3
Bacillus sp. HMSC036E02	1715069	PRJNA296197	296197	Terrabacteria group	Firmicutes	5.61512	34.9	-	LTRI01	90	5864	5534	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498598	GCA_001836235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/235/GCA_001836235.1_ASM183623v1	-	HMSC036E02
Streptomyces sp. CNS606	1305837	PRJNA195771	195771	Terrabacteria group	Actinobacteria	5.93292	73.1	-	AUFD01	67	5205	4962	7/10/13	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441534	GCA_000426325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/426/325/GCA_000426325.1_ASM42632v1	-	CNS606
Pseudomonas sp. Root562	1736561	PRJNA297942	297942	Proteobacteria	Gammaproteobacteria	6.21602	59	-	LMGK01	26	5693	5515	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155830	GCA_001427125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/125/GCA_001427125.1_Root562	26633631	Root562
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.27683	66.8	-	LPEX01	79	7687	7324	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449471	GCA_001530085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/085/GCA_001530085.1_ASM153008v1	-	MSMB1334WGS
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.10284	64	-	FVER01	56	5065	4864	3/10/17	3/18/17	Scaffold	SC	SAMEA2259558	GCA_900132165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/165/GCA_900132165.1_11861_7_21	-	753
Klebsiella aerogenes	548	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.19174	55.1	-	JVRL01	83	5069	4845	7/10/15	4/6/17	Contig	University of Washington	SAMN03197361	GCA_001055555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/555/GCA_001055555.1_ASM105555v1	26230489	170_EAER
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.00295	55.2	-	LAAG01	74	4969	4718	3/19/15	3/25/17	Contig	JCVI	SAMN03283623	GCA_000957645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/645/GCA_000957645.1_ASM95764v1	-	34994
Citrobacter freundii	546	PRJNA335560	335560	Proteobacteria	Gammaproteobacteria	5.35646	51.6	-	MDCZ01	178	5432	5159	11/17/16	4/5/17	Contig	Hospital Universitary 12 de octubre	SAMN05447752	GCA_001880955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/955/GCA_001880955.1_ASM188095v1	-	CF_14_ST_18
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	3.85394	38.7	-	MDIR01	155	3801	3602	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022876	GCA_001706315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/315/GCA_001706315.1_ASM170631v1	-	UKK-0553
Corynebacterium pseudotuberculosis	1719	PRJNA256958	256958	Terrabacteria group	Actinobacteria	2.36371	52.1	-	MCNW01	8	2195	1932	1/23/17	4/10/17	Contig	Federal University of Para	SAMN05509286	GCA_001969155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/155/GCA_001969155.1_ASM196915v1	-	MB336
Pseudoalteromonas sp. TMED43	1986613	PRJNA385857	385857	Proteobacteria	Gammaproteobacteria	3.99483	41	-	NHCW01	187	3639	3477	6/5/17	6/5/17	Contig	University of Southern California	SAMN06971897	GCA_002173015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/015/GCA_002173015.1_ASM217301v1	-	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.35691	67.4	-	LPBE01	93	6676	6345	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449367	GCA_001527095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/095/GCA_001527095.1_ASM152709v1	-	MSMB1802WGS
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.20649	60.7	-	DCNJ01	91	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451718	GCA_002321985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/985/GCA_002321985.1_ASM232198v1	28894102	-
Vibrio sp. JCM 18904	1298599	PRJDB875	243759	Proteobacteria	Gammaproteobacteria	5.27018	44.6	-	BAYR01	70	4989	4934	5/14/14	7/3/14	Contig	The University of Tokyo	SAMD00000560	GCA_000695035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/035/GCA_000695035.1_ASM69503v1	24948773	JCM 18904
Mycobacterium abscessus 6G-1108	1001738	PRJNA65207	65207	Terrabacteria group	Actinobacteria	5.33704	64.1	-	AKUH01	16	5434	5312	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00672662	GCA_000271145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/145/GCA_000271145.1_ASM27114v1	-	6G-1108
Lactobacillus salivarius	1624	PRJNA357984	357984	Terrabacteria group	Firmicutes	1.82974	32.7	-	NBDY01	36	1813	1708	4/5/17	4/8/17	Scaffold	University College Cork	SAMN06163275	GCA_002079925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/925/GCA_002079925.1_ASM207992v1	-	NCIMB8817
Cronobacter sakazakii	28141	PRJNA329459	329459	Proteobacteria	Gammaproteobacteria	4.57401	57.2	-	MBRY01	502	4373	4141	4/17/17	4/21/17	Contig	Guangdong Institute of Microbiology	SAMN05413000	GCA_002094665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/665/GCA_002094665.1_ASM209466v1	28057934	cro1160W
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.28801	54.9	-	FKZT01	50	6132	5867	5/19/16	2/21/17	Scaffold	SC	SAMEA2273567	GCA_900083855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/855/GCA_900083855.1_12045_6_35	-	2880STDY5682482
Enterobacter cloacae	550	PRJNA273275	273275	Proteobacteria	Gammaproteobacteria	5.13636	53.9	-	JXWL01	955	5613	4646	3/6/15	3/25/17	Contig	Canadian Food Inspection Agency	SAMN03292330	GCA_000948705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/705/GCA_000948705.1_ASM94870v1	-	OLC-1683
Proteus mirabilis	584	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.02524	39.3	-	JVUH01	4607	-	-	7/10/15	7/13/16	Contig	University of Washington	SAMN03197287	GCA_001061515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/515/GCA_001061515.1_ASM106151v1	26230489	1310_PMIR
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.55185	32.6	-	CUEW01	112	2559	2412	3/31/15	3/26/17	Contig	SC	SAMEA1035098	GCA_001235745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/745/GCA_001235745.1_7067_4_85	-	CN1134
Propionibacterium acnes HL059PA2	765092	PRJNA49217	49217	Terrabacteria group	Actinobacteria	2.47688	60	-	ADXS01	13	2492	2372	8/6/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189229	GCA_000145475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/475/GCA_000145475.1_ASM14547v1	-	HL059PA2
Burkholderia sp. MSMB1552	1636424	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.82104	67.4	-	LOZR01	108	6609	5988	1/22/16	4/11/17	Contig	Northern Arizona University	SAMN03449327	GCA_001527625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/625/GCA_001527625.1_ASM152762v1	-	MSMB1552
Campylobacter coli Z156	887313	PRJNA52763	52763	Proteobacteria	delta/epsilon subdivisions	1.68623	31.4	-	AINX01	87	1765	1681	3/16/12	3/15/17	Contig	Cornell University	SAMN02429004	GCA_000254235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/235/GCA_000254235.2_ASM25423v2	-	Z156
Lactobacillus plantarum WJL	1350466	PRJNA294130	294130	Terrabacteria group	Firmicutes	3.50307	44.2	-	LKLZ01	13	3433	3246	10/6/15	3/26/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04017315	GCA_001307325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/325/GCA_001307325.1_ASM130732v1	26607892	WJL
Serratia marcescens	615	PRJNA312127	312127	Proteobacteria	Gammaproteobacteria	5.30424	59.3	-	LSOB01	39	5114	4937	5/13/16	3/28/17	Contig	University of Oklahoma	SAMN04494514	GCA_001643155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/155/GCA_001643155.1_ASM164315v1	-	092713_C_TSB
Yersinia enterocolitica	630	PRJEB13626	384942	Proteobacteria	Gammaproteobacteria	4.42281	46.9	-	FKKN01	154	4187	3905	5/1/17	6/9/17	Contig	IP	SAMEA3935391	GCA_900079945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/945/GCA_900079945.1_IP35462	-	-
Mycoplasma pneumoniae	2104	PRJNA291007	291007	Terrabacteria group	Tenericutes	0.820469	40.1	-	LHQC01	12	802	707	9/22/15	4/4/17	Scaffold	Centre for genomic regulation (CRG)	SAMN03897313	GCA_001296705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/705/GCA_001296705.1_ASM129670v1	26335586	Mympn_5767
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.4881	53.6	-	NDHO01	29	2417	2242	4/28/17	5/3/17	Contig	Institute for Medical Research	SAMN06311216	GCA_002115185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/185/GCA_002115185.1_ASM211518v1	-	rz597
Bacillus cereus	1396	PRJNA279901	279901	Terrabacteria group	Firmicutes	5.67866	35.1948	chromosome:NZ_CP011145.1/CP011145.1; plasmid pFORC13:NZ_CP011146.1/CP011146.1	-	2	6036	5622	1/20/16	4/10/17	Complete Genome	Seoul National University	SAMN03451612	GCA_001518875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/875/GCA_001518875.1_ASM151887v1	-	FORC_013
Brucella melitensis F10/06-16	1169224	PRJNA173500	173500	Proteobacteria	Alphaproteobacteria	3.2989	57.2	-	AQKC01	3	3375	3165	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN00839697	GCA_000370665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/665/GCA_000370665.1_Bruc_meli_F10_06-16_V1	-	F10/06-16
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.867	46.7	-	JTHS01	79	2942	2742	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196646	GCA_001656815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/815/GCA_001656815.1_ASM165681v1	-	Lrh7
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.29493	40.3	-	LQEC01	32	2157	2057	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366524	GCA_001929595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/595/GCA_001929595.1_ASM192959v1	-	2450PM
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15103	41.2	-	CWDL01	84	2083	1905	6/23/15	3/26/17	Contig	SC	SAMEA1032828	GCA_001176245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/245/GCA_001176245.1_6903_7_25	-	EQUI0170
Stenotrophomonas maltophilia	40324	PRJNA323798	323798	Proteobacteria	Gammaproteobacteria	4.1234	66.7	-	LYVJ01	51	3820	3613	6/24/16	4/5/17	Contig	"UMR5557, University of Lyon"	SAMN05188928	GCA_001676385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/385/GCA_001676385.1_ASM167638v1	-	Sm46PAILV
Enterococcus faecium ERV38	1134825	PRJNA82039	82039	Terrabacteria group	Firmicutes	2.99674	38	-	AMAS01	179	3069	2929	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299500	GCA_000295215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/215/GCA_000295215.2_ASM29521v2	-	ERV38
Neisseria gonorrhoeae CH811	1352533	PRJNA209307	209307	Proteobacteria	Betaproteobacteria	2.11502	52.4	-	ATKL01	456	2481	2111	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02324810	GCA_001026555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/555/GCA_001026555.1_NGCH811	-	CH811
Streptococcus mutans TCI-399	1074092	PRJNA71947	71947	Terrabacteria group	Firmicutes	1.93573	36.7	-	AGMO01	53	1945	1859	10/6/11	3/22/17	Contig	JCVI	SAMN02436613	GCA_000229985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/229/985/GCA_000229985.2_SMUT3-NEX_1-399	-	TCI-399
Enterococcus faecalis R712	699186	PRJNA42527	42527	Terrabacteria group	Firmicutes	3.03954	37.3	-	ADDQ01	105	3122	2971	1/27/10	3/22/17	Scaffold	WashU	SAMN00189101	GCA_000163815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/815/GCA_000163815.1_ASM16381v1	-	R712
Clostridium botulinum B2 433	1379737	PRJNA213581	213581	Terrabacteria group	Firmicutes	4.12453	27.833	plasmid p1_B2_433:NZ_AUYZ01000011.1/AUYZ01000011.1; plasmid p2_B2_433:NZ_AUYZ01000012.1/AUYZ01000012.1	AUYZ01	12	4024	3868	6/24/14	3/24/17	Contig	Army Medical and Veterinary Research Center	SAMN02869847	GCA_000711115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/115/GCA_000711115.1_B2_433	26341861	B2 433
Bacillus thuringiensis serovar kurstaki str. HD73	1279365	PRJNA185468	185468	Terrabacteria group	Firmicutes	5.90857	35.1904	chromosome:NC_020238.1/CP004069.1; plasmid pAW63:NC_020240.1/CP004072.1; plasmid pHT11:NC_020250.1/CP004073.1; plasmid pHT7:NC_020243.1/CP004076.1; plasmid pHT73:NC_020249.1/CP004070.1; plasmid pHT77:NC_020239.1/CP004071.1; plasmid pHT8_1:NC_020241.1/CP004074.1; plasmid pHT8_2:NC_020242.1/CP004075.1	-	8	6382	5839	2/8/13	9/18/17	Complete Genome	"Institute of Plant Protection, Chinese Academy of Agricultural Sciences"	SAMN02603412	GCA_000338755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/338/755/GCA_000338755.1_ASM33875v1	23516207	HD73
Bacillus subtilis subsp. subtilis str. JH642	535025	PRJNA29817	29817	Terrabacteria group	Firmicutes	4.18762	43.5	chromosome:NZ_CM000489.1/CM000489.1	ABQM01	1	4413	4138	7/23/08	5/18/17	Chromosome	Baylor College of Medicine	SAMN02469326	GCA_000155355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/355/GCA_000155355.1_ASM15535v1	18670626	JH642
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.06549	45.2	-	LRFP01	67	4888	4596	4/4/16	3/19/17	Scaffold	Health Canada	SAMN04422016	GCA_001608735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/735/GCA_001608735.1_ASM160873v1	-	A2EZ614
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.97707	37.9	-	MLLP01	718	2108	1650	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297029	GCA_001867635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/635/GCA_001867635.1_ASM186763v1	27118061	AWRIB156
Xanthomonas oryzae pv. oryzae	64187	PRJNA269445	269445	Proteobacteria	Gammaproteobacteria	4.29714	63.9	-	JXFP01	448	4242	3445	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252547	GCA_001928015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/015/GCA_001928015.1_ASM192801v1	-	IXO89
Xanthomonas citri pv. glycines str. 8ra	1401257	PRJNA219367	219367	Proteobacteria	Gammaproteobacteria	5.33788	64.6	-	JDSU01	13	4826	4449	2/6/14	4/2/17	Contig	Kyung Hee University	SAMN02951910	GCA_000559125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/125/GCA_000559125.1_Version_1_of_Xanthomonas_axonopodis_pv._glycines_str._8ra_genome_sequences	-	8ra
Brucella abortus 85/69	1160179	PRJNA173573	173573	Proteobacteria	Alphaproteobacteria	3.27508	57.2	-	AQJJ01	6	3373	3141	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00811165	GCA_000370285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/285/GCA_000370285.1_Bruc_abor_85_69_V1	-	85/69
Francisella tularensis 99A-2628	1367846	PRJNA212941	212941	Proteobacteria	Gammaproteobacteria	1.87741	32.2	-	AUXB01	3	1951	1559	10/22/13	4/2/17	Contig	NBACC	SAMN02261485	GCA_000478845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/845/GCA_000478845.1_FT_99A	-	99A-2628
Clostridioides difficile CD3	1151252	PRJNA85677	85677	Terrabacteria group	Firmicutes	4.07294	28.2	-	AVGI01	344	3775	3590	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766610	GCA_000448825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/825/GCA_000448825.2_ASM44882v2	-	CD3
Vibrio cholerae HC-47A1	992003	PRJNA64013	64013	Proteobacteria	Gammaproteobacteria	4.03172	47.5	-	ALDR01	110	3860	3624	7/18/12	3/23/17	Scaffold	Institute for Genome Sciences	SAMN00622039	GCA_000279955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/955/GCA_000279955.1_ASM27995v1	-	HC-47A1
Ralstonia solanacearum	305	PRJNA343497	343497	Proteobacteria	Betaproteobacteria	5.61104	64.1	-	MKKZ01	20	4463	3565	12/12/16	4/6/17	Scaffold	Rutgers University	SAMN05789166	GCA_001901665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/665/GCA_001901665.1_ASM190166v1	-	BBAC-C1
Bacillus thuringiensis serovar mexicanensis	180868	PRJNA269979	269979	Terrabacteria group	Firmicutes	5.87035	34.9	-	JWJY01	250	6336	5894	4/6/15	4/3/17	Contig	UTSA	SAMN03260237	GCA_000969665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/665/GCA_000969665.1_ASM96966v1	25977430	27
Bacillus thuringiensis BMB171	714359	PRJNA43631	43631	Terrabacteria group	Firmicutes	5.64305	35.1891	chromosome:NC_014171.1/CP001903.1; plasmid pBMB171:NC_014172.1/CP001904.1	-	2	5940	5579	5/20/10	5/18/17	Complete Genome	Huazhong Agricultural University	SAMN02603314	GCA_000092165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/165/GCA_000092165.1_ASM9216v1	20525827	BMB171
Lactococcus lactis subsp. lactis	1360	PRJNA320694	320694	Terrabacteria group	Firmicutes	2.36867	35.1886	chromosome:CP015895.1; plasmid p184A:CP016691.1; plasmid p184B:CP016692.1; plasmid p184C:CP016693.1	-	4	2426	2345	4/4/17	4/4/17	Complete Genome	University College Cork	SAMN04955247	GCA_002078395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/395/GCA_002078395.1_ASM207839v1	-	184
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.03408	67.1	-	MURM01	205	7650	7159	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001850	GCA_001991665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/665/GCA_001991665.1_ASM199166v1	-	VC14013
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.20092	38.3	-	NGPO01	111	2164	1999	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848390	GCA_002253945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/945/GCA_002253945.1_ASM225394v1	-	111l
Bacteroides fragilis str. 3397 T14	1339299	PRJNA206142	206142	FCB group	Bacteroidetes/Chlorobi group	5.23835	43.3	-	JGDO01	94	4672	4381	3/20/14	4/4/17	Contig	IGS	SAMN02314520	GCA_000599165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/165/GCA_000599165.2_ASM59916v2	-	3397 T14
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.49054	50.9	-	LXVF01	431	4917	4242	7/20/16	6/12/17	Contig	California Department of Public Health	SAMN04440974	GCA_001688895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/895/GCA_001688895.1_ASM168889v1	28028547	CDPH_C85
Legionella pneumophila subsp. pneumophila	91891	PRJNA239272	239272	Proteobacteria	Gammaproteobacteria	3.56867	38.2	-	JFIF01	54	3282	3122	3/7/14	3/24/17	Scaffold	Beijing Institute of Microbiology and Epidemiology	SAMN02650974	GCA_000586175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/175/GCA_000586175.1_ATCC_35289	-	ATCC 35289
Vibrio vulnificus	672	PRJNA299124	299124	Proteobacteria	Gammaproteobacteria	4.88169	46.7	-	LMXW01	106	4589	4248	12/7/16	4/6/17	Scaffold	Exeter University	SAMN04193761	GCA_001890465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/465/GCA_001890465.1_ASM189046v1	-	NSV-5830
Pseudomonas syringae pv. syringae 1212	1357293	PRJNA211607	211607	Proteobacteria	Gammaproteobacteria	6.16391	59.1	-	AVCR02	338	5603	5276	8/20/13	3/24/17	Contig	University of Arizona	SAMN02471561	GCA_000452465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/465/GCA_000452465.2_Psy1212_130925_2.0	24224664	1212
Streptococcus suis 89-590	1214174	PRJNA171446	171446	Terrabacteria group	Firmicutes	2.16164	41.2	-	ALLY01	69	2188	2042	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469545	GCA_000440915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/915/GCA_000440915.1_version1	-	89-590
Streptococcus agalactiae CJB111	342617	PRJNA15607	15607	Terrabacteria group	Firmicutes	2.10503	35.6	-	AAJQ01	155	2204	1956	10/6/05	3/15/17	Contig	TIGR	SAMN02435851	GCA_000167755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/755/GCA_000167755.1_ASM16775v1	16172379	CJB111
Bacillus thuringiensis	1428	PRJNA302106	302106	Terrabacteria group	Firmicutes	6.49046	35.1836	chromosome:NZ_CP014847.1/CP014847.1; plasmid pHD120017:NZ_CP014848.1/CP014848.1; plasmid pHD120038:NZ_CP014849.1/CP014849.1; plasmid pHD120039:NZ_CP014850.1/CP014850.1; plasmid pHD120112:NZ_CP014851.1/CP014851.1; plasmid pHD120161:NZ_CP014852.1/CP014852.1; plasmid pHD120345:NZ_CP014853.1/CP014853.1	-	7	6903	6356	3/28/16	4/5/17	Complete Genome	"Institute of Plant Protection, Chinese Academy of Agricultural Sciences"	SAMN04266503	GCA_001598095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/095/GCA_001598095.1_ASM159809v1	-	HD12
Bacillus cereus G9241	269801	PRJNA235894	235894	Terrabacteria group	Firmicutes	5.72007	35.1812	chromosome:NZ_CP009590.1/CP009590.1; plasmid pBC210:NZ_CP009591.1/CP009591.1; plasmid pBCX01:NZ_CP009592.1/CP009592.1; plasmid pBFH_1:NZ_CP009589.1/CP009589.1	-	4	6105	5688	2/5/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03085864	GCA_000832805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/805/GCA_000832805.1_ASM83280v1	25931591	G9241
Bifidobacterium longum	216816	PRJEB18553	373869	Terrabacteria group	Actinobacteria	2.33463	59.9	-	FTRH01	39	2048	1907	2/8/17	4/6/17	Contig	University of Tromso	SAMEA51815668	GCA_900157095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/095/GCA_900157095.1_Bifido_01_v1	-	-
Shigella flexneri	623	PRJNA315925	315925	Proteobacteria	Gammaproteobacteria	4.60644	50.7	-	LVIY01	402	5297	4241	5/20/16	8/8/17	Contig	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04570193	GCA_001649185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/185/GCA_001649185.1_ASM164918v1	-	SH4s06
Bacillus anthracis	1392	PRJNA243052	243052	Terrabacteria group	Firmicutes	5.36193	35.1	-	MJAW01	44	5977	5641	12/12/16	3/28/17	Scaffold	Center for Microbial Genetics and Genomics	SAMN02839456	GCA_000740925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/925/GCA_000740925.2_ASM74092v2	-	STI-1
Pseudomonas putida	303	PRJNA381373	381373	Proteobacteria	Gammaproteobacteria	6.16495	61	-	NBWA01	118	5975	5692	4/17/17	4/21/17	Scaffold	Beijing Advanced Innovation Center for Food Nutrition and Human Health	SAMN06675398	GCA_002094775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/775/GCA_002094775.1_ASM209477v1	-	DZ-F23
Leptospira interrogans serovar Copenhageni str. Fiocruz LV4118	1291327	PRJNA188993	188993	Spirochaetes	Spirochaetia	4.60327	35	-	AOVX01	151	4116	3746	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01919804	GCA_000342845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/845/GCA_000342845.1_CA_glsol098	-	Fiocruz LV4118
Streptococcus pyogenes ABC020047959	1439167	PRJNA233282	233282	Terrabacteria group	Firmicutes	1.80678	38.5	-	JJFH01	7	1861	1735	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567631	GCA_000629765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/765/GCA_000629765.1_Stre_pyog_ABC020047959_V1	-	ABC020047959
Bacillus cereus	1396	PRJNA264413	264413	Terrabacteria group	Firmicutes	5.71894	35.1791	chromosome:NZ_CP009941.1/CP009941.1; plasmid pBCN:NZ_CP009939.1/CP009939.1; plasmid pBCX01:NZ_CP009940.1/CP009940.1	-	3	6119	5631	12/4/14	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03121921	GCA_000789315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/315/GCA_000789315.1_ASM78931v1	25593267	03BB87
Lactococcus lactis subsp. lactis	1360	PRJNA320695	320695	Terrabacteria group	Firmicutes	2.63413	35.1788	chromosome:NZ_CP015896.1/CP015896.1; plasmid p229A:NZ_CP016694.1/CP016694.1; plasmid p229B:NZ_CP016695.1/CP016695.1; plasmid p229C:NZ_CP016696.1/CP016696.1; plasmid p229D:NZ_CP016697.1/CP016697.1; plasmid p229E:NZ_CP016698.1/CP016698.1	-	6	2736	2522	4/4/17	4/5/17	Complete Genome	University College Cork	SAMN04955249	GCA_002078415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/415/GCA_002078415.1_ASM207841v1	28356072	229
Streptococcus pneumoniae	1313	PRJNA229402	229402	Terrabacteria group	Firmicutes	2.12741	39.7	-	JFIV01	119	2263	1985	10/2/14	3/10/17	Scaffold	Harvard Medical School / Massachusetts Eye and Ear Infirmary	SAMN02641370	GCA_000762565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/565/GCA_000762565.1_Sp_2440.v1.0	-	ECC_2440
Bacillus cereus	1396	PRJNA287734	287734	Terrabacteria group	Firmicutes	5.39851	35.1782	chromosome:NZ_CP012483.1/CP012483.1; plasmid plasmid-32:NZ_CP012485.1/CP012485.1; plasmid plasmid-35-36:NZ_CP012484.1/CP012484.1; plasmid plasmid-37:NZ_CP012486.1/CP012486.1	-	4	5692	5355	9/2/15	4/10/17	Complete Genome	BioInformatics Center	SAMN03785549	GCA_001277915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/915/GCA_001277915.1_ASM127791v1	-	NJ-W
Mycobacterium tuberculosis 1821ADB37	1334078	PRJNA203190	203190	Terrabacteria group	Actinobacteria	4.41153	65.5	chromosome:NZ_CP009200.1/CP009200.1	-	1	4283	4065	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837652	GCA_001997525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/525/GCA_001997525.1_ASM199752v1	27261264	1821ADB37
Haemophilus influenzae	727	PRJNA316655	316655	Proteobacteria	Gammaproteobacteria	1.87725	38	-	LVZH01	34	1908	1756	4/14/17	4/21/17	Contig	Genomic Research Laboratory (GRL)	SAMN04590167	GCA_002093255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/255/GCA_002093255.1_ASM209325v1	27756711	GE71
Mycobacterium bovis BCG	33892	PRJEB8560	294541	Terrabacteria group	Actinobacteria	4.32267	65.6	-	CUWR01	1	4200	3997	9/1/15	4/4/17	Scaffold	KAUST	SAMEA3257669	GCA_001287425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/425/GCA_001287425.1_bcg_Tokyo	-	Japan
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.12058	69.2	-	LMVX01	238	4880	4596	4/4/16	4/5/17	Contig	Robert Koch Institute	SAMN04229409	GCA_001610405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/405/GCA_001610405.1_ASM161040v1	-	MAH-E-101-6
Lactococcus lactis subsp. lactis	1360	PRJNA294255	294255	Terrabacteria group	Firmicutes	2.37639	34.9	-	LKLM01	62	2354	2216	12/4/15	4/4/17	Contig	Radboudumc	SAMN04026626	GCA_001456755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/755/GCA_001456755.1_ASM145675v1	-	KF201
Bacillus cereus AH676	526991	PRJNA29693	29693	Terrabacteria group	Firmicutes	5.59475	35	chromosome:NZ_CM000738.1/CM000738.1	ACMQ01	1	11666	11089	4/30/09	5/18/17	Chromosome	Naval Medical Research Center	SAMN00727673	GCA_000161355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/355/GCA_000161355.1_ASM16135v1	22645259	AH676
Staphylococcus epidermidis CIM40	1344998	PRJNA207987	207987	Terrabacteria group	Firmicutes	2.58315	31.9	-	ATCW02	148	2567	2386	7/2/13	3/24/17	Contig	Max-Planck-Institute for Evolutionary Biology	SAMN02470515	GCA_000417985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/985/GCA_000417985.2_CIM40_v2	24435862	CIM40
uncultured Termite group 1 bacterium phylotype Rs-D17	471821	PRJDA20871	20871	Elusimicrobia	environmental samples	1.14857	35.1773	chromosome:NC_020419.1/AP009510.1; plasmid pTGRD1:NC_020420.1/AP009511.1; plasmid pTGRD2:NC_020421.1/AP009512.1; plasmid pTGRD3:NC_020422.1/AP009513.1	-	4	1130	1040	3/19/08	9/6/17	Complete Genome	RIKEN Genomic Sciences Center (GSC)	SAMD00060933	GCA_000146025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/146/025/GCA_000146025.1_ASM14602v1	18391199	-
Yersinia pestis subsp. microtus bv. Caucasica	385966	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.56234	47.6	-	MIDY01	176	4423	4064	1/26/17	3/29/17	Scaffold	SRCAMB	SAMN05521421	GCA_001972395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/395/GCA_001972395.1_ASM197239v1	-	SCPM-O-B-6176
Pseudomonas fluorescens	294	PRJNA283458	283458	Proteobacteria	Gammaproteobacteria	7.27564	62.8	-	LDET01	98	6732	6500	6/8/15	4/3/17	Contig	"University of Michigan, Ann Arbor"	SAMN03650327	GCA_001021695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/695/GCA_001021695.1_ASM102169v1	26227600	AU20219
Bacillus thuringiensis HD-789	1217737	PRJNA171844	171844	Terrabacteria group	Firmicutes	6.33463	35.1765	chromosome:NC_018508.1/CP003763.1; plasmid p01:NC_018516.1/CP003764.1; plasmid p02:NC_018509.1/CP003765.1; plasmid p03:NC_018510.1/CP003766.1; plasmid p04:NC_018517.1/CP003767.1; plasmid p05:NC_018511.1/CP003768.1; plasmid p06:NC_018512.1/CP003769.1	-	7	6801	6404	8/22/12	5/18/17	Complete Genome	Los Alamos National Laboratory	SAMN02603564	GCA_000292705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/705/GCA_000292705.1_ASM29270v1	24309743	HD-789
Bacillus cereus E33L	288681	PRJNA12468	12468	Terrabacteria group	Firmicutes	5.84323	35.1687	chromosome:NC_006274.1/CP000001.1; plasmid pE33L466:NC_007103.1/CP000040.1; plasmid pE33L5:NC_007104.1/CP000041.1; plasmid pE33L54:NC_007105.1/CP000042.1; plasmid pE33L8:NC_007106.1/CP000043.1; plasmid pE33L9:NC_007107.1/CP000044.1	-	6	6314	5858	9/10/04	5/18/17	Complete Genome	DOE Joint Genome Institute	SAMN02598269	GCA_000011625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/625/GCA_000011625.1_ASM1162v1	-	E33L
Bacillus cereus E33L	288681	PRJNA238054	238054	Terrabacteria group	Firmicutes	5.84678	35.1686	chromosome:NZ_CP009968.1/CP009968.1; plasmid pBCO_1:NZ_CP009967.1/CP009967.1; plasmid pBCO_2:NZ_CP009966.1/CP009966.1; plasmid pBCO_3:NZ_CP009969.1/CP009969.1; plasmid pBCO_4:NZ_CP009970.1/CP009970.1; plasmid pBCO_5:NZ_CP009965.1/CP009965.1	-	6	6317	5844	2/5/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03199333	GCA_000833045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/045/GCA_000833045.1_ASM83304v1	25931591	E33L
Bacillus thuringiensis Bt18247	1423143	PRJNA227492	227492	Terrabacteria group	Firmicutes	6.1382	35.1552	chromosome:NZ_CP015250.1/CP015250.1; plasmid p113275:NZ_CP015253.1/CP015253.1; plasmid p12509:NZ_CP015256.1/CP015256.1; plasmid p130548:NZ_CP015252.1/CP015252.1; plasmid p15092:NZ_CP015255.1/CP015255.1; plasmid p174778:NZ_CP015251.1/CP015251.1; plasmid p81952:NZ_CP015254.1/CP015254.1	-	7	6554	5929	9/7/16	4/17/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04513593	GCA_001721165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/165/GCA_001721165.1_ASM172116v1	-	Bt18247
Bacillus thuringiensis	1428	PRJNA238081	238081	Terrabacteria group	Firmicutes	6.09337	35.1468	chromosome:NZ_CP009335.1/CP009335.1; plasmid 1:NZ_CP009336.1/CP009336.1; plasmid 2:NZ_CP009334.1/CP009334.1; plasmid 3:NZ_CP009332.1/CP009332.1; plasmid 4:NZ_CP009333.1/CP009333.1	-	5	6558	6174	2/5/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03010438	GCA_000832485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/485/GCA_000832485.1_ASM83248v1	25931591	HD1011
Bacillus cereus	1396	PRJNA242371	242371	Terrabacteria group	Firmicutes	5.73461	35.135	chromosome:NZ_CP015727.1/CP015727.1; plasmid pBCA1:NZ_CP015730.1/CP015730.1; plasmid pBCA2:NZ_CP015728.1/CP015728.1; plasmid pBCA3:NZ_CP015729.1/CP015729.1	-	4	5995	5624	5/17/16	3/28/17	Complete Genome	Beijing University of Chemical Technology	SAMN02693464	GCA_000635895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/895/GCA_000635895.2_ASM63589v2	24874679	A1
Pseudomonas fluorescens	294	PRJNA290438	290438	Proteobacteria	Gammaproteobacteria	6.38815	60.2	-	LHVP01	17	5884	5692	8/18/15	4/4/17	Contig	JLU	SAMN03891682	GCA_001269845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/845/GCA_001269845.1_ASM126984v1	-	DSM 50090
Yersinia pestis subsp. microtus bv. Caucasica	385966	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.50379	47.6	-	MIEA01	166	4352	4002	1/26/17	3/29/17	Scaffold	SRCAMB	SAMN05521423	GCA_001972405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/405/GCA_001972405.1_ASM197240v1	-	SCPM-O-B-6992
Lactobacillus johnsonii	33959	PRJNA316010	316010	Terrabacteria group	Firmicutes	2.04239	35.1319	chromosome:NZ_CP021704.1/CP021704.1; plasmid pUMNLJ22_1:NZ_CP021705.1/CP021705.1; plasmid pUMNLJ22_2:NZ_CP021706.1/CP021706.1	-	3	2000	1749	6/8/17	6/10/17	Complete Genome	University of Minnesota	SAMN04573146	GCA_002176835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/835/GCA_002176835.1_ASM217683v1	-	UMNLJ22
Staphylococcus epidermidis MC28	1344995	PRJNA207991	207991	Terrabacteria group	Firmicutes	2.55921	31.8	-	ATCZ02	381	2540	2357	7/2/13	3/24/17	Contig	Max-Planck-Institute for Evolutionary Biology	SAMN02470526	GCA_000418005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/005/GCA_000418005.2_MC28_v2	-	MC28
Bacillus cereus AH1271	526992	PRJNA29695	29695	Terrabacteria group	Firmicutes	5.6567	35.3	chromosome:NZ_CM000739.1/CM000739.1	ACMR01	1	11827	11259	4/30/09	6/15/17	Chromosome	Naval Medical Research Center	SAMN00727675	GCA_000161375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/375/GCA_000161375.1_ASM16137v1	22645259	AH1271
Lactococcus lactis subsp. lactis	1360	PRJNA294255	294255	Terrabacteria group	Firmicutes	2.47593	34.9	-	LKLO01	75	2461	2294	12/4/15	4/4/17	Contig	Radboudumc	SAMN04026632	GCA_001456775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/775/GCA_001456775.1_ASM145677v1	-	Li-1
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.1227	69.2	-	LMWA01	282	4892	4570	4/4/16	4/5/17	Contig	Robert Koch Institute	SAMN04229412	GCA_001610525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/525/GCA_001610525.1_ASM161052v1	-	MAH-E-108
Mycobacterium bovis BCG	33892	PRJEB8560	294541	Terrabacteria group	Actinobacteria	4.28534	65.6	-	CUWI01	1	4167	3961	9/1/15	4/4/17	Scaffold	KAUST	SAMEA3257667	GCA_001287485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/485/GCA_001287485.1_bcg_Frappier	-	Frappier
Haemophilus influenzae	727	PRJNA316654	316654	Proteobacteria	Gammaproteobacteria	1.82546	37.9	-	LVZG01	24	1827	1695	4/14/17	4/21/17	Contig	Genomic Research Laboratory (GRL)	SAMN04590166	GCA_002093265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/265/GCA_002093265.1_ASM209326v1	27756711	GE68
Mycobacterium tuberculosis 1821ADB38	1334079	PRJNA203191	203191	Terrabacteria group	Actinobacteria	4.41153	65.5	chromosome:NZ_CP009201.1/CP009201.1	-	1	4303	4066	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837653	GCA_001997545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/545/GCA_001997545.1_ASM199754v1	27261264	1821ADB38
Bacillus thuringiensis serovar coreanensis	180843	PRJNA299545	299545	Terrabacteria group	Firmicutes	6.28612	35.1242	chromosome:CP016194.1; plasmid pST7-1:CP016195.1; plasmid pST7-2:CP016196.1; plasmid pST7-3:CP016197.1; plasmid pST7-4:CP016198.1	-	5	6323	5675	6/23/16	6/23/16	Complete Genome	Sichuan Agricultural University	SAMN05232858	GCA_001675515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/515/GCA_001675515.1_ASM167551v1	-	ST7
Streptococcus pneumoniae	1313	PRJNA229402	229402	Terrabacteria group	Firmicutes	2.12172	39.7	-	JFJE01	88	2272	1993	10/2/14	3/10/17	Scaffold	Harvard Medical School / Massachusetts Eye and Ear Infirmary	SAMN02641372	GCA_000762585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/585/GCA_000762585.1_Sp_3540.v1.0	-	ECC_3540
Bacillus thuringiensis	1428	PRJNA388287	388287	Terrabacteria group	Firmicutes	5.66119	35.1212	chromosome:NZ_CP022345.1/CP022345.1; plasmid unnamed1:NZ_CP022346.1/CP022346.1	-	2	6012	5605	7/20/17	7/22/17	Complete Genome	Chungbuk National University	SAMN07317425	GCA_002222555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/222/555/GCA_002222555.1_ASM222255v1	-	c25
Bacillus thuringiensis serovar chinensis CT-43	541229	PRJNA43737	43737	Terrabacteria group	Firmicutes	6.15115	35.1212	chromosome:NC_017208.1/CP001907.1; plasmid pCT127:NC_017202.1/CP001908.1; plasmid pCT14:NC_017209.1/CP001909.1; plasmid pCT281:NC_017203.1/CP001910.1; plasmid pCT51:NC_017204.1/CP001911.1; plasmid pCT6880:NC_017210.1/CP001912.1; plasmid pCT72:NC_017205.1/CP001913.1; plasmid pCT8252:NC_017211.1/CP001914.1; plasmid pCT83:NC_017206.1/CP001915.1; plasmid pCT8513:NC_017207.1/CP001916.1; plasmid pCT9547:NC_017212.1/CP001917.1	-	11	6576	6105	3/28/11	6/15/17	Complete Genome	Huazhong Agricultural University	SAMN02603315	GCA_000193355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/355/GCA_000193355.1_ASM19335v1	21551307	CT-43
Streptococcus pyogenes ABC020047925	1439163	PRJNA233281	233281	Terrabacteria group	Firmicutes	1.83473	38.5	-	JJFI01	2	1881	1757	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567630	GCA_000629785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/785/GCA_000629785.1_Stre_pyog_ABC020047925_V1	-	ABC020047925
Leptospira interrogans serovar Pyrogenes str. Sri Lanka 39	1291355	PRJNA188975	188975	Spirochaetes	Spirochaetia	4.85281	35.1	-	AOWP01	215	4511	4058	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920626	GCA_000342865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/865/GCA_000342865.1_CA_glsol054	-	Sri Lanka 39
Pseudomonas putida	303	PRJNA381373	381373	Proteobacteria	Gammaproteobacteria	6.68447	61.7	-	NBWB01	82	6338	6079	4/17/17	4/21/17	Scaffold	Beijing Advanced Innovation Center for Food Nutrition and Human Health	SAMN06675397	GCA_002094785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/785/GCA_002094785.1_ASM209478v1	-	DZ-C20
Bacillus anthracis	1392	PRJNA243517	243517	Terrabacteria group	Firmicutes	5.46092	35.1	-	JMPU01	3	6083	5587	8/26/14	4/18/17	Scaffold	Los Alamos National Laboratory	SAMN02736952	GCA_000743805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/805/GCA_000743805.1_BDQ	25301645	Zimbabwe 89
Shigella flexneri	623	PRJNA315925	315925	Proteobacteria	Gammaproteobacteria	4.65189	50.6	-	LVIZ01	445	5345	4273	5/20/16	8/8/17	Contig	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04570194	GCA_001649195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/195/GCA_001649195.1_ASM164919v1	-	SH4s07
Bifidobacterium longum	216816	PRJEB18553	373869	Terrabacteria group	Actinobacteria	2.33474	59.9	-	FTRJ01	88	2067	1868	2/8/17	4/6/17	Contig	University of Tromso	SAMEA51818668	GCA_900157115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/115/GCA_900157115.1_Bifido_05_v1	-	-
Lactobacillus johnsonii	33959	PRJNA316010	316010	Terrabacteria group	Firmicutes	2.01044	35.1174	chromosome:NZ_CP021703.1/CP021703.1; plasmid pUMNLJ21_1:NZ_CP021701.1/CP021701.1; plasmid pUMNLJ21_2:NZ_CP021702.1/CP021702.1	-	3	1963	1726	6/8/17	6/10/17	Complete Genome	University of Minnesota	SAMN04573145	GCA_002176855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/855/GCA_002176855.1_ASM217685v1	-	UMNLJ21
Bacillus cereus	1396	PRJNA326996	326996	Terrabacteria group	Firmicutes	5.72111	35.1155	chromosome:NZ_CP016595.1/CP016595.1; plasmid pBCK802:NZ_CP016597.1/CP016597.1; plasmid pBCM301:NZ_CP016596.1/CP016596.1	-	3	5979	5558	7/6/17	7/8/17	Complete Genome	Korea Food Research Institute	SAMN05300204	GCA_002215175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/175/GCA_002215175.1_ASM221517v1	-	K8
Streptococcus agalactiae MRI Z1-211	1154874	PRJNA86407	86407	Terrabacteria group	Firmicutes	2.12051	35.4	-	ALSB01	21	2184	2068	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993326	GCA_000287955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/955/GCA_000287955.1_ASM28795v1	-	MRI Z1-211
Streptococcus suis 5428	1214153	PRJNA171447	171447	Terrabacteria group	Firmicutes	1.98647	41.4	-	ALLZ01	84	2018	1859	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469506	GCA_000440935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/935/GCA_000440935.1_version1	-	5428
Pseudomonas syringae USA011	1357289	PRJNA211418	211418	Proteobacteria	Gammaproteobacteria	6.42386	59.3	-	AVDX02	197	5697	5373	8/20/13	3/27/17	Contig	University of Arizona	SAMN02471567	GCA_000452525.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/525/GCA_000452525.3_USA011_091113_2.0	24459267	USA011
Vibrio vulnificus	672	PRJNA299120	299120	Proteobacteria	Gammaproteobacteria	4.86472	46.7	-	LMXV01	73	4584	4314	12/7/16	4/6/17	Scaffold	Exeter University	SAMN04193760	GCA_001890525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/525/GCA_001890525.1_ASM189052v1	-	ORL-1506
Legionella pneumophila subsp. fraseri	91892	PRJNA239272	239272	Proteobacteria	Gammaproteobacteria	3.51478	38.2	-	JFIG01	65	3205	3011	3/7/14	3/24/17	Scaffold	Beijing Institute of Microbiology and Epidemiology	SAMN02650973	GCA_000586195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/195/GCA_000586195.1_ATCC_35251	-	ATCC 35251
Shigella sonnei	624	PRJNA385907	385907	Proteobacteria	Gammaproteobacteria	4.60135	50.9	-	NGWB01	493	5333	4194	6/6/17	6/8/17	Contig	Christian Medical College	SAMN06920483	GCA_002174605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/605/GCA_002174605.1_ASM217460v1	-	FC1772
Bacteroides fragilis str. 3976T8	1339314	PRJNA206157	206157	FCB group	Bacteroidetes/Chlorobi group	5.4077	43.7	-	JGDS01	73	4847	4505	3/20/14	4/4/17	Contig	IGS	SAMN02314538	GCA_000599185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/185/GCA_000599185.2_ASM59918v2	-	3976T8
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.26693	38.6	-	NGPS01	154	2343	2088	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848386	GCA_002253955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/955/GCA_002253955.1_ASM225395v1	-	107j
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.22377	67	-	MUQM01	167	7797	7357	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001822	GCA_001991695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/695/GCA_001991695.1_ASM199169v1	-	VC5732
Bacillus thuringiensis	1428	PRJNA359733	359733	Terrabacteria group	Firmicutes	5.67554	35.1063	chromosome:NZ_CP019230.1/CP019230.1; plasmid pYGD30:NZ_CP019231.1/CP019231.1; plasmid pYGD36:NZ_CP019232.1/CP019232.1; plasmid pYGD5:NZ_CP019233.1/CP019233.1; plasmid pYGD83:NZ_CP019234.1/CP019234.1; plasmid pYGD98:NZ_CP019235.1/CP019235.1	-	6	6101	5669	6/9/17	8/24/17	Complete Genome	"Wuhan Institute Of Virology, Chinese Academy Of Sciences"	SAMN06197294	GCA_002184245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/245/GCA_002184245.1_ASM218424v1	-	YGd22-03
Vagococcus penaei	633807	PRJNA362684	362684	Terrabacteria group	Firmicutes	2.3653	35.1	chromosome:NZ_CP019609.1/CP019609.1	-	1	2259	2082	2/14/17	4/17/17	Complete Genome	Kyung Hee University	SAMN06245872	GCA_001998885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/885/GCA_001998885.1_ASM199888v1	19897618	CD276
Bacillus thuringiensis	1428	PRJNA287868	287868	Terrabacteria group	Firmicutes	5.83213	35	-	LFQM01	181	6118	5771	8/5/15	4/3/17	Contig	University of Malaya	SAMN03793176	GCA_001238465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/465/GCA_001238465.1_ASM123846v1	-	ZBG4
Wolbachia endosymbiont of Drosophila simulans wHa	1236909	PRJNA176303	176303	Proteobacteria	Alphaproteobacteria	1.2958	35.1	chromosome:NC_021089.1/CP003884.1	-	1	1263	1126	4/22/13	4/8/17	Complete Genome	Uppsala University	SAMN02604273	GCA_000376605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/605/GCA_000376605.1_ASM37660v1	23593012	wHa
Vibrio cholerae HC-41A1	991962	PRJNA63931	63931	Proteobacteria	Gammaproteobacteria	4.02783	47.5	-	ALDN01	116	3837	3597	10/4/12	3/23/17	Scaffold	Institute for Genome Sciences	SAMN00622023	GCA_000302755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/755/GCA_000302755.1_ASM30275v1	-	HC-41A1
Clostridioides difficile CD8	1151253	PRJNA85679	85679	Terrabacteria group	Firmicutes	4.04427	28.4	-	AVGJ01	280	3869	3616	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766626	GCA_000448845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/845/GCA_000448845.2_ASM44884v2	-	CD8
Francisella tularensis subsp. tularensis str. SCHU S4 substr. FTS-634/635	1341661	PRJNA217353	217353	Proteobacteria	Gammaproteobacteria	1.8927	32.3	-	JIDR01	2	1927	1666	4/11/14	4/2/17	Contig	Broad Institute	SAMN02335351	GCA_000628905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/905/GCA_000628905.1_Fran_tula_Schu_S4_FTS-634_635_V1	-	Schu S4 substr. FTS-634/635
Brucella abortus 87/28	1169216	PRJNA173504	173504	Proteobacteria	Alphaproteobacteria	3.30378	57.2	-	AQJK01	5	3380	3138	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00839701	GCA_000370305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/305/GCA_000370305.1_Bruc_abor_87_28_V1	-	87/28
Xanthomonas citri subsp. citri	611301	PRJEB7180	265960	Proteobacteria	Gammaproteobacteria	5.16397	64.7	-	CDDV01	258	4710	4361	11/4/14	4/2/17	Contig	CIRAD	SAMEA2844848	GCA_000825185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/185/GCA_000825185.1_XACJJ10	-	JJ10-1
Xanthomonas oryzae pv. oryzae	64187	PRJNA269448	269448	Proteobacteria	Gammaproteobacteria	4.27173	63.9	-	JXFS01	418	4293	3441	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252577	GCA_001928025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/025/GCA_001928025.1_ASM192802v1	-	IXO93
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.04944	37.7	-	MLLI01	433	2075	1823	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297022	GCA_001867655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/655/GCA_001867655.1_ASM186765v1	27118061	AWRIB136
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	4.9639	45.3	-	LRFX01	40	4783	4538	4/4/16	3/19/17	Scaffold	Health Canada	SAMN04422063	GCA_001608855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/855/GCA_001608855.1_ASM160885v1	-	W501
Bacillus subtilis subsp. subtilis str. SMY	535024	PRJNA29851	29851	Terrabacteria group	Firmicutes	4.21464	43.5	chromosome:NZ_CM000490.1/CM000490.1	ABQN01	1	4425	4143	7/23/08	5/18/17	Chromosome	Baylor College of Medicine	SAMN02469322	GCA_000155375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/375/GCA_000155375.1_ASM15537v1	18670626	SMY
Sulfolobus islandicus LAL14/1	1241935	PRJNA177222	177222	TACK group	Crenarchaeota	2.46518	35.1	chromosome:NC_021058.1/CP003928.1	-	1	2728	2506	4/15/13	4/1/17	Complete Genome	"Pasteur Institute, Paris, France"	SAMN02603709	GCA_000364745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/745/GCA_000364745.1_ASM36474v1	23594878	LAL14/1
Clostridium botulinum C/D str. BKT2873	1443127	PRJNA233460	233460	Terrabacteria group	Firmicutes	3.16551	28.2533	plasmid p1CbBKT2873:NZ_CM003340.1/CM003340.1	JENT01	159	3047	2795	6/20/14	3/26/17	Contig	National Veterinary Institute (SVA)	SAMN02593749	GCA_000724305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/305/GCA_000724305.2_BKT2873_1.0	25254374	BKT2873
Enterococcus faecalis 599	1134784	PRJNA81957	81957	Terrabacteria group	Firmicutes	3.04841	37.2	-	ALZI01	106	3118	2966	8/27/12	3/27/17	Scaffold	Washington University	SAMN02299460	GCA_000293985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/985/GCA_000293985.2_ASM29398v2	-	599
Streptococcus mutans TCI-400	1074093	PRJNA71949	71949	Terrabacteria group	Firmicutes	1.86962	36.8	-	AGMP01	93	1872	1773	10/6/11	3/22/17	Contig	JCVI	SAMN02436359	GCA_000230005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/005/GCA_000230005.2_SMUT3-NEX_2-400	-	TCI-400
Neisseria gonorrhoeae MU_NG26	1351816	PRJNA209659	209659	Proteobacteria	Betaproteobacteria	2.12818	52.4	-	ATRM01	330	2409	2169	6/10/15	4/11/17	Contig	"Read Laboratory, Emory University"	SAMN02338841	GCA_001026615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/615/GCA_001026615.1_ASM102661v1	-	MU_NG26
Enterococcus faecium ERV165	1134822	PRJNA82033	82033	Terrabacteria group	Firmicutes	2.90051	37.8	-	AMAV01	201	2974	2820	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299497	GCA_000295235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/235/GCA_000295235.2_ASM29523v2	-	ERV165
Stenotrophomonas maltophilia	40324	PRJNA323842	323842	Proteobacteria	Gammaproteobacteria	4.58306	66.4	-	LYVL01	64	4273	4106	6/24/16	4/5/17	Contig	"UMR5557, University of Lyon"	SAMN05190064	GCA_001676395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/395/GCA_001676395.1_ASM167639v1	-	SmF22
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12705	41.2	-	CWAS01	74	2069	1875	6/23/15	3/26/17	Contig	SC	SAMEA1032829	GCA_001176265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/265/GCA_001176265.1_6903_3_44	-	EQUI0094
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.29503	40.3	-	LQEH01	32	2159	2054	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366529	GCA_001929655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/655/GCA_001929655.1_ASM192965v1	-	2512PM
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.85352	46.8	-	JTHT01	134	2951	2687	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196635	GCA_001656835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/835/GCA_001656835.1_ASM165683v1	-	Lrh6
Brucella melitensis F8/01-155	1160225	PRJNA173633	173633	Proteobacteria	Alphaproteobacteria	3.29955	57.2	-	AQKD01	11	3372	3149	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN00811213	GCA_000370685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/685/GCA_000370685.1_Bruc_meli_F8_01-155_V1	-	F8/01-155
Riemerella anatipestifer RA-CH-1	1228997	PRJNA172646	172646	FCB group	Bacteroidetes/Chlorobi group	2.30952	35.1	chromosome:NC_018609.1/CP003787.1	-	1	2207	2104	9/7/12	3/30/17	Complete Genome	Riemerella anatipestifer	SAMN02603758	GCA_000295655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/655/GCA_000295655.1_ASM29565v1	-	RA-CH-1
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.45258	53.4	-	NDHS01	32	2370	2227	4/28/17	5/3/17	Contig	Institute for Medical Research	SAMN06311211	GCA_002115215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/215/GCA_002115215.1_ASM211521v1	-	c319
Mycoplasma pneumoniae	2104	PRJNA291007	291007	Terrabacteria group	Tenericutes	0.822703	40.1	-	LHQD01	14	810	712	9/22/15	4/4/17	Scaffold	Centre for genomic regulation (CRG)	SAMN03897314	GCA_001296725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/725/GCA_001296725.1_ASM129672v1	26335586	Mympn_5817
Yersinia enterocolitica	630	PRJEB13626	384942	Proteobacteria	Gammaproteobacteria	4.42645	46.9	-	FKKP01	150	4201	3884	5/1/17	5/9/17	Contig	IP	SAMEA3935398	GCA_900079955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/955/GCA_900079955.1_IP35471	-	-
Serratia marcescens	615	PRJNA340333	340333	Proteobacteria	Gammaproteobacteria	5.49262	59.4	-	MJVB01	107	5284	5088	10/25/16	3/28/17	Contig	Michigan State University	SAMN05712591	GCA_001853455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/455/GCA_001853455.1_ASM185345v1	-	ano1
Lactobacillus plantarum	1590	PRJNA297436	297436	Terrabacteria group	Firmicutes	3.23177	44.5	-	LKHZ01	2	3149	2979	10/8/15	3/26/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04123802	GCA_001308305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/308/305/GCA_001308305.1_ASM130830v1	26607887	Nizo2877
Campylobacter coli BIGS0003	1247729	PRJNA177352	177352	Proteobacteria	delta/epsilon subdivisions	1.62132	31.8	-	ANGN01	118	1630	1534	11/23/12	3/15/17	Contig	Swansea University	SAMN01795759	GCA_000314025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/025/GCA_000314025.1_ASM31402v1	23279096	BIGS0003
Burkholderia sp. MSMB1078WGS	1637900	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.21143	66.7	-	LPDI01	116	6692	6241	1/22/16	4/11/17	Contig	Northern Arizona University	SAMN03449427	GCA_001528895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/895/GCA_001528895.1_ASM152889v1	-	MSMB1078WGS
Propionibacterium acnes HL036PA3	765108	PRJNA49251	49251	Terrabacteria group	Actinobacteria	2.4798	60	-	ADXY01	13	2495	2346	8/5/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189210	GCA_000145495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/495/GCA_000145495.1_ASM14549v1	-	HL036PA3
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.60643	32.6	-	CUDZ01	80	2583	2469	3/31/15	3/26/17	Contig	SC	SAMEA1035030	GCA_001235805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/805/GCA_001235805.1_7067_4_63	-	51-42
Proteus mirabilis	584	PRJNA290370	290370	Proteobacteria	Gammaproteobacteria	3.9245	38.7	-	LGTA01	56	-	-	5/2/16	5/2/16	Contig	Facultad de Ciencias	SAMN03890860	GCA_001647515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/515/GCA_001647515.1_P.mirabilisPr2921	-	Pr2921
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.96402	55.1	-	JYMN01	97	4939	4675	3/13/15	3/25/17	Contig	University of Minnesota	SAMN03333164	GCA_000952405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/405/GCA_000952405.1_ASM95240v1	26438492	MNCRE23
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.85203	55.1	-	FKZW01	65	5623	5375	5/19/16	2/21/17	Scaffold	SC	SAMEA2273541	GCA_900083865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/865/GCA_900083865.1_12082_4_71	-	2880STDY5682456
Cronobacter sakazakii	28141	PRJNA329459	329459	Proteobacteria	Gammaproteobacteria	4.56886	56.7	-	MBRZ01	259	4299	4102	4/17/17	4/21/17	Contig	Guangdong Institute of Microbiology	SAMN05413002	GCA_002094675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/675/GCA_002094675.1_ASM209467v1	28057934	cro911C2-2
Lactobacillus salivarius	1624	PRJNA357984	357984	Terrabacteria group	Firmicutes	1.91981	32.8	-	NBEP01	112	1907	1683	4/5/17	4/5/17	Contig	University College Cork	SAMN06163258	GCA_002079655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/655/GCA_002079655.1_ASM207965v1	-	CCuG47825
Mycobacterium abscessus subsp. bolletii 1S-151-0930	1001704	PRJNA65137	65137	Terrabacteria group	Actinobacteria	4.89576	64.3	-	AKUI01	6	4901	4792	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02435974	GCA_000271165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/165/GCA_000271165.1_ASM27116v1	24565502	1S-151-0930
Vibrio sp. JCM 18905	1298600	PRJDB876	243760	Proteobacteria	Gammaproteobacteria	5.15654	44.9	-	BAYS01	64	4808	4738	5/14/14	7/3/14	Contig	The University of Tokyo	SAMD00000561	GCA_000695055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/055/GCA_000695055.1_ASM69505v1	24948773	JCM 18905
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.37089	63.8	-	DCNK01	31	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451717	GCA_002322705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/705/GCA_002322705.1_ASM232270v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.47726	67.2	-	LPBB01	185	6732	6326	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449364	GCA_001527105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/105/GCA_001527105.1_ASM152710v1	-	MSMB1797WGS
Pseudoalteromonas sp. UBA846	1947295	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.36178	40.6	-	DBGU01	145	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450583	GCA_002295525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/525/GCA_002295525.1_ASM229552v1	28894102	-
Corynebacterium pseudotuberculosis	1719	PRJNA256958	256958	Terrabacteria group	Actinobacteria	2.37468	52.1	-	MCOB01	3	2144	1779	1/23/17	1/23/17	Contig	Federal University of Para	SAMN05509251	GCA_001969065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/065/GCA_001969065.1_ASM196906v1	-	MB122
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	3.97284	38.8	-	MDIS01	217	3889	3679	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022877	GCA_001706355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/355/GCA_001706355.1_ASM170635v1	-	UKK-0554
Citrobacter freundii	546	PRJNA380846	380846	Proteobacteria	Gammaproteobacteria	5.17049	51.5	-	NEFW01	87	5158	4873	6/9/17	6/12/17	Contig	South China Agricultural University	SAMN06649984	GCA_002189125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/125/GCA_002189125.1_ASM218912v1	28433744	D36-1
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.82975	55.5	-	LAAE01	80	4687	4499	3/19/15	3/25/17	Contig	JCVI	SAMN03283630	GCA_000957655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/655/GCA_000957655.1_ASM95765v1	-	34999
Klebsiella aerogenes	548	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.23199	54.7	-	JUXH01	182	5153	4942	7/10/15	4/6/17	Contig	University of Washington	SAMN03197885	GCA_001057945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/945/GCA_001057945.1_ASM105794v1	26230489	682_EAER
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.10234	64	-	FVFK01	55	5057	4869	3/10/17	3/18/17	Scaffold	SC	SAMEA2259559	GCA_900132465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/465/GCA_900132465.1_11861_7_22	-	754
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.38103	66.8	-	LPEY01	72	7784	7419	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449472	GCA_001530105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/105/GCA_001530105.1_ASM153010v1	-	MSMB1337WGS
Pseudomonas sp. Root569	1736566	PRJNA297942	297942	Proteobacteria	Gammaproteobacteria	6.22867	59.9	-	LMGQ01	29	5717	5515	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155835	GCA_001427465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/465/GCA_001427465.1_Root569	26633631	Root569
Streptomyces sp. CNQ329	1298879	PRJNA190863	190863	Terrabacteria group	Actinobacteria	7.18523	73.1	-	AXVU01	151	6180	5769	10/25/13	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02441102	GCA_000482585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/585/GCA_000482585.1_ASM48258v1	-	CNQ329
Bacillus sp. HMSC76G11	1608910	PRJNA274562	274562	Terrabacteria group	Firmicutes	5.04024	40.5	-	LTNF01	107	5033	4856	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498895	GCA_001838545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/545/GCA_001838545.1_ASM183854v1	-	HMSC76G11
Acinetobacter sp. 1461402	1310647	PRJNA194723	194723	Proteobacteria	Gammaproteobacteria	3.20858	41.6	-	JEWP01	59	3064	2855	2/25/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02380512	GCA_000580635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/635/GCA_000580635.1_ASM58063v1	-	1461402
Clostridium sp. N3C	1776758	PRJEB15168	357890	Terrabacteria group	Firmicutes	3.03613	32.4	-	FMJL01	109	2916	2752	12/16/16	4/16/17	Contig	CEBITEC	SAMEA4386285	GCA_900095445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/445/GCA_900095445.1_N3C	-	-
Sphingomonas sp. CCH5-A5	1768741	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	3.52311	66.9	-	LSHQ01	68	3356	3220	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299413	GCA_001555785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/785/GCA_001555785.1_ASM155578v1	-	CCH5-A5
Rhodococcus sp. LB1	1807499	PRJNA272922	272922	Terrabacteria group	Actinobacteria	10.752	66.6	-	LTCZ01	448	10008	9213	3/8/16	4/12/17	Scaffold	University of East Anglia	SAMN04516629	GCA_001583455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/455/GCA_001583455.1_ASM158345v1	-	LB1
Enterobacter sp. Bisph2	1274400	PRJNA270819	270819	Proteobacteria	Gammaproteobacteria	5.53563	53.2	-	JXAF01	46	5285	5094	1/6/15	4/10/17	Contig	"faculte de medecine, Aix-Marseille Universite"	SAMN03271815	GCA_000814915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/915/GCA_000814915.1_widad	27222800	Bisph2
Staphylococcus sp. HMSC075F12	1739442	PRJNA300092	300092	Terrabacteria group	Firmicutes	2.41706	32.7	-	LTVW01	81	2371	2284	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480365	GCA_001813835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/835/GCA_001813835.1_ASM181383v1	-	HMSC075F12
Corynebacterium sp. HMSC069E04	1739400	PRJNA300050	300050	Terrabacteria group	Actinobacteria	2.64226	60.6	-	LWQH01	90	2467	2326	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480061	GCA_001813175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/175/GCA_001813175.1_ASM181317v1	-	HMSC069E04
Arthrobacter sp. EPSL27	1745378	PRJNA299877	299877	Terrabacteria group	Actinobacteria	4.17605	67.8	-	LNUT01	8	3791	3661	1/12/16	4/11/17	Scaffold	University of Florence	SAMN04216968	GCA_001512305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/305/GCA_001512305.1_ASM151230v1	-	EPSL27
Bradyrhizobium sp. JGI 0001002-A22	1094929	PRJNA176070	176070	Proteobacteria	Alphaproteobacteria	1.96126	61.7	-	AUOJ02	67	-	-	7/16/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440699	GCA_000464155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/155/GCA_000464155.2_ASM46415v2	-	JGI 0001002-A22
Streptococcus sp. HMSC056D07	1739474	PRJNA300124	300124	Terrabacteria group	Firmicutes	2.02195	38.7	-	LTUV01	73	2014	1816	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480393	GCA_001814455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/455/GCA_001814455.1_ASM181445v1	-	HMSC056D07
Mycobacterium sp. IS-1742	1772285	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.23919	69.2	-	LQIV01	45	5030	4875	1/6/16	4/11/17	Contig	JCVI	SAMN04349502	GCA_001500125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/500/125/GCA_001500125.1_ASM150012v1	-	IS-1742
Prevotella sp. CAG:592	1262931	PRJEB949	206848	FCB group	Bacteroidetes/Chlorobi group	2.72602	48.5	-	CBGI01	174	2194	2160	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138687	GCA_000436015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/015/GCA_000436015.1_MGS592	-	-
Enterococcus sp. 12C11_DIV0727	1834167	PRJNA313452	313452	Terrabacteria group	Firmicutes	3.73243	37.1	-	NGLZ01	8	3368	3133	5/16/17	5/24/17	Scaffold	Broad Institute	SAMN04634065	GCA_002148425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/425/GCA_002148425.1_ASM214842v1	-	12C11_DIV0727
Paenibacillus sp. FSL H7-0326	1921144	PRJNA343020	343020	Terrabacteria group	Firmicutes	6.03521	45.5	-	MPVN01	27	5729	5494	1/18/17	4/16/17	Contig	Cornell University	SAMN05929609	GCA_001955535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/535/GCA_001955535.1_ASM195553v1	-	FSL H7-0326
Bacteroides sp. Phil13	1929999	PRJNA357304	357304	FCB group	Bacteroidetes/Chlorobi group	5.83205	42.4	-	MSHA01	106	-	-	1/10/17	1/10/17	Scaffold	University of Queensland	SAMN06140820	GCA_001940965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/965/GCA_001940965.1_ASM194096v1	-	-
Prochlorococcus sp. scB241_526B19	1471438	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.469441	31.6	-	JFKO01	235	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02647111	GCA_000634615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/615/GCA_000634615.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. P031	1895619	PRJNA341037	341037	Proteobacteria	delta/epsilon subdivisions	1.55978	33.7	-	MJKX01	17	1601	1519	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687057	GCA_002138915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/915/GCA_002138915.1_ASM213891v1	28854596	P031
Rhizobium sp. PDC82	1881064	PRJEB15994	348268	Proteobacteria	Alphaproteobacteria	5.58296	59.1	-	FNEW01	17	5416	5236	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428983	GCA_900100235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/235/GCA_900100235.1_IMG-taxon_2690315628_annotated_assembly	-	PDC82
Mesorhizobium sp. ORS3324	1505932	PRJEB6725	261148	Proteobacteria	Alphaproteobacteria	6.56416	63.5	-	CCMY01	242	6317	6032	9/15/14	4/10/17	Contig	IRD	SAMEA2677837	GCA_000824825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/825/GCA_000824825.1_Illumina_assembly_ORS3324T	-	-
Microbacterium sp. cl140	1761807	PRJEB16164	348914	Terrabacteria group	Actinobacteria	3.99579	70.5	-	FNGQ01	11	3706	3596	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488593	GCA_900103075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/075/GCA_900103075.1_IMG-taxon_2639762579_annotated_assembly	-	CL140
Bacillus velezensis	492670	PRJNA379527	379527	Terrabacteria group	Firmicutes	3.93315	46.6	-	NBMM01	39	3905	3726	4/10/17	4/13/17	Contig	University of Neuchatel	SAMN06611073	GCA_002082455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/455/GCA_002082455.1_ASM208245v1	-	SSBW-19
Gilliamella apicola SCGC AB-598-I20	1445514	PRJNA233650	233650	Proteobacteria	Gammaproteobacteria	2.21254	35	-	JAIN01	389	2377	2377	7/14/14	7/14/14	Contig	Yale University	SAMN02570580	GCA_000725175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/175/GCA_000725175.1_sag_g1_i20_noCtrl	25210772	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.57703	57.5	-	FXOX01	78	5618	5298	4/28/17	5/6/17	Scaffold	SC	SAMEA2609450	GCA_900181225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/225/GCA_900181225.1_14936_3_10	-	3189STDY5864767
Staphylococcus argenteus	985002	PRJEB20633	390605	Terrabacteria group	Firmicutes	2.78795	32.3	-	FXVY01	29	2764	2592	6/15/17	7/5/17	Contig	Geogentics	SAMEA104034178	GCA_900183835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/835/GCA_900183835.1_M5200	-	-
Xanthomonas phaseoli pv. phaseoli	317013	PRJNA266886	266886	Proteobacteria	Gammaproteobacteria	5.04753	65	-	JTCU02	153	4533	4022	11/21/14	4/3/17	Contig	University of Exeter	SAMN03175018	GCA_000785945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/945/GCA_000785945.2_NCPPB301v2	26500625	NCPPB 301
Xanthomonas phaseoli pv. phaseoli	317013	PRJNA264808	264808	Proteobacteria	Gammaproteobacteria	5.19761	64.6	-	JSEU02	158	4673	4152	11/10/14	4/3/17	Contig	University of Exeter	SAMN03142808	GCA_000786915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/915/GCA_000786915.2_NCPPB1495v2	26500625	NCPPB 1495
Staphylococcus argenteus	985002	PRJEB20633	390605	Terrabacteria group	Firmicutes	2.77833	32.3	-	FXWF01	56	2754	2572	6/15/17	7/5/17	Contig	Geogentics	SAMEA104034174	GCA_900183845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/845/GCA_900183845.1_M4611	-	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.8683	56.9	-	FXPC01	123	6033	5635	4/28/17	5/6/17	Scaffold	SC	SAMEA2609452	GCA_900181265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/265/GCA_900181265.1_14936_3_11	-	3189STDY5864768
Gilliamella apicola SCGC AB-598-P17	1445512	PRJNA233648	233648	Proteobacteria	Gammaproteobacteria	1.47386	34.4	-	JAIO01	296	1639	1611	7/14/14	7/14/14	Contig	Yale University	SAMN02570574	GCA_000725245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/245/GCA_000725245.1_sag_g1_p17_noCtrl	25210772	-
Bacillus velezensis	492670	PRJNA379527	379527	Terrabacteria group	Firmicutes	3.93612	46.6	-	NBMP01	46	3906	3727	4/10/17	4/13/17	Contig	University of Neuchatel	SAMN06611070	GCA_002082465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/465/GCA_002082465.1_ASM208246v1	-	SSBW-8
Microbacterium sp. ru370.1	1761809	PRJEB16278	348858	Terrabacteria group	Actinobacteria	3.38998	70.7	-	FNJG01	10	3173	3067	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487848	GCA_900104435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/435/GCA_900104435.1_IMG-taxon_2608642165_annotated_assembly	-	RU370.1
Mesorhizobium sp. LC103	1120658	PRJNA281560	281560	Proteobacteria	Alphaproteobacteria	6.05248	64.1	-	LBCQ01	29	5830	5713	5/28/15	4/10/17	Contig	Monash University Malaysia	SAMN03491740	GCA_001014615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/014/615/GCA_001014615.1_ASM101461v1	-	LC103
Rhizobium sp. NFR12	1566261	PRJEB15678	347459	Proteobacteria	Alphaproteobacteria	4.75053	60.4	-	FNWM01	16	4492	4372	10/27/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN03159407	GCA_900108545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/545/GCA_900108545.1_IMG-taxon_2600254933_annotated_assembly	-	NFR12
Campylobacter sp. P091	1895621	PRJNA341039	341039	Proteobacteria	delta/epsilon subdivisions	1.65752	33.5	-	MJKZ01	18	1699	1615	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687059	GCA_002138935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/935/GCA_002138935.1_ASM213893v1	28854596	P091
Prochlorococcus sp. scB241_526B22	1471439	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.934681	31.6	-	JFKP01	498	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02647112	GCA_000634635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/635/GCA_000634635.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Bacteroides sp. UBA939	1946092	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.20575	44	-	DBDF01	239	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451394	GCA_002293435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/435/GCA_002293435.1_ASM229343v1	28894102	-
uncultured Ruminococcus sp.	165186	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.40473	43.7	-	FMEZ01	81	2985	2933	8/16/16	8/16/16	Scaffold	SC	SAMEA2393090	GCA_900066065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/065/GCA_900066065.1_12718_7_93	-	-
Paenibacillus sp. FSL R5-0765	1920425	PRJNA343020	343020	Terrabacteria group	Firmicutes	6.91765	46.1	-	MRTS01	85	5884	5755	1/18/17	4/16/17	Contig	Cornell University	SAMN05929624	GCA_001955855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/855/GCA_001955855.1_ASM195585v1	-	FSL R5-0765
Enterococcus sp. 12F9_DIV0723	1834169	PRJNA313452	313452	Terrabacteria group	Firmicutes	3.95726	42.2	-	NIBK01	4	3745	3571	6/6/17	6/8/17	Scaffold	Broad Institute	SAMN04634067	GCA_002174375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/375/GCA_002174375.1_ASM217437v1	-	12F9_DIV0723
Prevotella sp. CAG:732	1262934	PRJEB993	206771	FCB group	Bacteroidetes/Chlorobi group	2.98301	46.1	-	CBGP01	130	2445	2409	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138688	GCA_000436035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/035/GCA_000436035.1_MGS732	-	-
Mycobacterium sp. GA-1999	1772275	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.15305	66.9	-	LQIL01	36	4924	4786	1/6/16	4/11/17	Contig	JCVI	SAMN04349492	GCA_001500145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/500/145/GCA_001500145.1_ASM150014v1	-	GA-1999
Streptococcus sp. HMSC078H12	1739483	PRJNA300133	300133	Terrabacteria group	Firmicutes	2.12498	40	-	LTUM01	46	1978	1890	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480405	GCA_001814615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/615/GCA_001814615.1_ASM181461v1	-	HMSC078H12
Bradyrhizobium sp. JGI 0001019-J21	1268345	PRJNA183579	183579	Proteobacteria	Alphaproteobacteria	1.19168	62.5	-	AXYA01	106	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441098	GCA_000485255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/255/GCA_000485255.1_ASM48525v1	-	JGI 0001019-J21
Arthrobacter sp. OY3WO11	1835723	PRJNA312098	312098	Terrabacteria group	Actinobacteria	4.51704	65.4	-	LWLP01	3	4138	3999	5/10/16	4/12/17	Scaffold	Agriculture and Agri-Food Canada	SAMN04856844	GCA_001641125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/125/GCA_001641125.1_ASM164112v1	-	OY3WO11
Corynebacterium sp. HMSC056E09	1739416	PRJNA300066	300066	Terrabacteria group	Actinobacteria	2.67224	61	-	LTWQ01	59	2516	2384	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480353	GCA_001813425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/425/GCA_001813425.1_ASM181342v1	-	HMSC056E09
Staphylococcus sp. HMSC073C12	1739444	PRJNA300094	300094	Terrabacteria group	Firmicutes	2.59651	33.6	-	LTVU01	43	2485	2412	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480367	GCA_001813905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/905/GCA_001813905.1_ASM181390v1	-	HMSC073C12
Enterobacter cloacae complex sp. 35618	1870938	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.10958	55.8	-	JZZI01	81	4952	4740	3/19/15	4/20/17	Contig	JCVI	SAMN03283661	GCA_000956965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/965/GCA_000956965.1_ASM95696v1	-	35618
Rhodococcus sp. YH3-3	1803579	PRJDB4573	317146	Terrabacteria group	Actinobacteria	7.31691	62.1	-	BCWH01	38	6967	6613	3/30/16	4/12/17	Scaffold	"Asano active enzyme molecule project, Toyama prefectural university"	SAMD00047653	GCA_001653035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/035/GCA_001653035.1_ASM165303v1	27198031	YH3-3
Sphingomonas sp. CCH18-B1	1768744	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	3.97775	64.3	-	LSHT01	133	3863	3710	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299416	GCA_001555895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/895/GCA_001555895.1_ASM155589v1	-	CCH18-B1
Clostridium sp. DSM 4029	1882754	PRJEB18203	355507	Terrabacteria group	Firmicutes	3.1135	61.6	-	FQVY01	11	2942	2824	12/2/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444424	GCA_900129515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/515/GCA_900129515.1_IMG-taxon_2695420950_annotated_assembly	-	DSM 4029
Acinetobacter sp. 21871	1310626	PRJNA194702	194702	Proteobacteria	Gammaproteobacteria	3.90837	38.6	-	JEWV01	102	3843	3520	2/25/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02380518	GCA_000580675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/675/GCA_000580675.1_ASM58067v1	-	21871
Bacillus sp. FJAT-44921	1912214	PRJNA350200	350200	Terrabacteria group	Firmicutes	4.75185	37.3	-	MTIY01	4	4720	4505	3/6/17	3/9/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN05934587	GCA_002019795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/795/GCA_002019795.1_ASM201979v1	-	FJAT-44921
Streptomyces sp. DpondAA-B6	682311	PRJNA195846	195846	Terrabacteria group	Actinobacteria	7.29552	72.1	-	AZVE01	36	6378	6086	1/3/14	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02597209	GCA_000514055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/055/GCA_000514055.1_ASM51405v1	-	DpondAA-B6
Pseudomonas sp. Root68	1736585	PRJNA297942	297942	Proteobacteria	Gammaproteobacteria	6.25093	60	-	LMHI01	25	5740	5517	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155854	GCA_001427765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/765/GCA_001427765.1_Root68	26633631	Root68
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.38419	66.8	-	LPEZ01	73	7781	7421	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449473	GCA_001530135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/135/GCA_001530135.1_ASM153013v1	-	MSMB1338WGS
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.84164	64.1	-	FSCN01	16	4796	4632	12/14/16	3/21/17	Scaffold	SC	SAMEA2259650	GCA_900132985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/985/GCA_900132985.1_11893_6_12	-	845
Klebsiella aerogenes	548	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.01288	55	-	JULT01	147	4882	4711	7/10/15	4/6/17	Contig	University of Washington	SAMN03198185	GCA_001059975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/975/GCA_001059975.1_ASM105997v1	26230489	965_EAER
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.89667	55.4	-	LAAD01	47	4769	4549	3/19/15	3/25/17	Contig	JCVI	SAMN03283619	GCA_000957685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/685/GCA_000957685.1_ASM95768v1	-	35002
Citrobacter freundii	546	PRJNA184698	184698	Proteobacteria	Gammaproteobacteria	5.31738	51.6	-	MTLJ01	171	5304	4994	6/14/17	6/19/17	Contig	Georgia Institute of Technology	SAMN06009454	GCA_002192675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/675/GCA_002192675.1_ASM219267v1	-	DPB_2
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	3.90871	38.8	-	MDIX01	94	3800	3632	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022847	GCA_001706365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/365/GCA_001706365.1_ASM170636v1	-	-
Corynebacterium pseudotuberculosis	1719	PRJNA256958	256958	Terrabacteria group	Actinobacteria	2.36317	52.1	-	MCOA01	4	2135	1766	1/23/17	1/23/17	Contig	Federal University of Para	SAMN05509267	GCA_001969095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/095/GCA_001969095.1_ASM196909v1	-	MB154
Pseudoalteromonas sp. UBA2102	1947291	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.25518	40.6	-	DCYU01	153	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06450592	GCA_002331165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/165/GCA_002331165.1_ASM233116v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.51452	67.3	-	LPBD01	185	6813	6384	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449366	GCA_001527145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/145/GCA_001527145.1_ASM152714v1	-	MSMB1801WGS
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.55636	61.3	-	DCLS01	322	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451425	GCA_002323015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/015/GCA_002323015.1_ASM232301v1	28894102	-
Vibrio sp. JCM 19053	1460648	PRJDB1626	243822	Proteobacteria	Gammaproteobacteria	5.16868	44.4	-	BAXK01	106	4853	4806	5/21/14	7/3/14	Contig	"Microbe Division/JCM, RIKEN BioResource Center"	SAMD00000384	GCA_000698165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/165/GCA_000698165.1_ASM69816v1	24948773	JCM 19053
Mycobacterium abscessus 6G-0728-S	1001736	PRJNA65203	65203	Terrabacteria group	Actinobacteria	5.31502	64.1	-	AKUG01	6	5428	5316	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00672661	GCA_000271185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/185/GCA_000271185.1_ASM27118v1	-	6G-0728-S
Cronobacter sakazakii	28141	PRJNA329459	329459	Proteobacteria	Gammaproteobacteria	4.25854	57.5	-	MBSA01	208	4090	3912	4/17/17	4/21/17	Contig	Guangdong Institute of Microbiology	SAMN05413003	GCA_002094715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/715/GCA_002094715.1_ASM209471v1	28057934	cro1212W
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.15942	54.9	-	FKYT01	72	6002	5730	5/19/16	2/21/17	Scaffold	SC	SAMEA2273687	GCA_900083875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/875/GCA_900083875.1_11983_8_42	-	2880STDY5682611
Enterobacter cloacae	550	PRJDB3530	276534	Proteobacteria	Gammaproteobacteria	5.19895	55	-	BBUQ01	177	5233	4964	3/3/15	3/25/17	Contig	National Institute of Infectious Diseases	SAMD00026326	GCA_000953895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/895/GCA_000953895.1_ASM95389v1	-	MRY13-0312
Proteus mirabilis	584	PRJNA314401	314401	Proteobacteria	Gammaproteobacteria	3.81562	38.5	-	LUFT01	63	3492	2543	3/3/17	3/3/17	Contig	King Saud University	SAMN04534829	GCA_002013325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/325/GCA_002013325.1_ASM201332v1	-	SCDR1
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.4973	32.7	-	CUDI01	77	2516	2372	3/31/15	3/26/17	Contig	SC	SAMEA1035117	GCA_001236365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/365/GCA_001236365.1_7067_4_49	-	51-22
Propionibacterium acnes HL030PA2	765104	PRJNA49243	49243	Terrabacteria group	Actinobacteria	2.50547	60.1	-	ADXZ01	22	2522	2381	8/5/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189207	GCA_000145515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/515/GCA_000145515.1_ASM14551v1	-	HL030PA2
Burkholderia sp. MSMB617WGS	1637831	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.82286	67.6	-	LPKI01	116	6457	5929	1/22/16	4/11/17	Contig	Northern Arizona University	SAMN03449615	GCA_001532025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/025/GCA_001532025.1_ASM153202v1	-	MSMB617WGS
Campylobacter coli BIGS0002	1247728	PRJNA177352	177352	Proteobacteria	delta/epsilon subdivisions	1.67691	31.4	-	ANGM01	181	1788	1606	11/23/12	3/15/17	Contig	Swansea University	SAMN01795758	GCA_000314045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/045/GCA_000314045.1_ASM31404v1	23279096	BIGS0002
Lactobacillus plantarum	1590	PRJNA295891	295891	Terrabacteria group	Firmicutes	3.18526	44.5	-	LKCO01	51	3102	2942	10/16/15	3/26/17	Contig	Nanchang University	SAMN04092618	GCA_001331925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/925/GCA_001331925.1_ASM133192v1	26659683	WLPL04
Serratia marcescens	615	PRJNA340334	340334	Proteobacteria	Gammaproteobacteria	5.471	59.5	-	MJVC01	71	5272	5081	10/25/16	3/28/17	Contig	Michigan State University	SAMN05712592	GCA_001853495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/495/GCA_001853495.1_ASM185349v1	-	ano2
Yersinia enterocolitica	630	PRJEB13626	384942	Proteobacteria	Gammaproteobacteria	4.40884	47	-	FKLN01	190	4181	3859	5/1/17	5/9/17	Contig	IP	SAMEA3935402	GCA_900080125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/125/GCA_900080125.1_IP35477	-	-
Mycoplasma pneumoniae	2104	PRJNA291007	291007	Terrabacteria group	Tenericutes	0.821159	40.1	-	LHQF01	15	805	697	9/22/15	4/4/17	Scaffold	Centre for genomic regulation (CRG)	SAMN03897316	GCA_001296735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/735/GCA_001296735.1_ASM129673v1	26335586	Mympn_5954
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.34805	53.4	-	NDHQ01	32	2245	2110	4/28/17	5/3/17	Contig	Institute for Medical Research	SAMN06311214	GCA_002115225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/225/GCA_002115225.1_ASM211522v1	-	rz523
Lactococcus lactis subsp. lactis IO-1	1046624	PRJDA68077	68077	Terrabacteria group	Firmicutes	2.42147	35.1	chromosome:NC_020450.1/AP012281.1	-	1	2351	2216	2/4/12	4/1/17	Complete Genome	"Department of Bioscience, Tokyo University of Agriculture"	SAMD00060995	GCA_000344575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/575/GCA_000344575.1_ASM34457v1	22461545	IO-1
Brucella melitensis F9/05	1169226	PRJNA173533	173533	Proteobacteria	Alphaproteobacteria	3.29942	57.2	-	AQKE01	12	3380	3153	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN00839730	GCA_000370705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/705/GCA_000370705.1_Bruc_meli_F9_05_V1	-	F9/05
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.84607	46.7	-	JTHU01	148	2913	2645	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196630	GCA_001656845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/845/GCA_001656845.1_ASM165684v1	-	Lrh5
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.29429	40.3	-	LQEL01	31	2157	2056	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366533	GCA_001929705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/705/GCA_001929705.1_ASM192970v1	-	2578PM
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.16129	41.2	-	CWGC01	98	2105	1909	6/23/15	3/26/17	Contig	SC	SAMEA1032830	GCA_001176285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/285/GCA_001176285.1_6817_2_76	-	EQUI0029
Stenotrophomonas maltophilia	40324	PRJNA323845	323845	Proteobacteria	Gammaproteobacteria	4.26418	66.8	-	LZPD01	30	3877	3754	6/24/16	4/5/17	Contig	"UMR5557, University of Lyon"	SAMN05190067	GCA_001676435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/435/GCA_001676435.1_ASM167643v1	-	SmCVFa1
Enterococcus faecium ERV161	1134821	PRJNA82031	82031	Terrabacteria group	Firmicutes	2.79485	37.8	-	AMAW01	193	2874	2736	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299496	GCA_000295255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/255/GCA_000295255.2_ASM29525v2	-	ERV161
Neisseria gonorrhoeae	485	PRJNA285297	285297	Proteobacteria	Betaproteobacteria	2.14997	52.4	-	LDOB01	132	2507	2193	6/15/15	4/11/17	Contig	Istituto Superiore di Sanita	SAMN03743773	GCA_001028035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/035/GCA_001028035.1_ASM102803v1	26272575	G2891
Streptococcus mutans TCI-51	1074100	PRJNA71955	71955	Terrabacteria group	Firmicutes	1.93689	36.7	-	AGMQ01	57	1950	1854	10/6/11	3/22/17	Contig	JCVI	SAMN02436360	GCA_000230025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/025/GCA_000230025.2_SMUT3-NEX_9-51	-	TCI-51
Enterococcus faecalis ERV103	1134785	PRJNA81959	81959	Terrabacteria group	Firmicutes	3.06482	37.4	-	ALZJ01	56	3129	2990	8/27/12	3/27/17	Scaffold	Washington University	SAMN02299461	GCA_000294005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/005/GCA_000294005.2_ASM29400v2	-	ERV103
Clostridium botulinum C/D str. BKT75002	1443124	PRJNA233458	233458	Terrabacteria group	Firmicutes	3.13876	27.9709	plasmid p1CbBKT75002:NZ_CM003339.1/CM003339.1	JENS01	121	3038	2792	6/20/14	3/26/17	Contig	National Veterinary Institute (SVA)	SAMN02593748	GCA_000724325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/325/GCA_000724325.2_BKT75002_1.0	25254374	BKT75002
Sulfolobus islandicus HVE10/4	930943	PRJNA60481	60481	TACK group	Crenarchaeota	2.6552	35.1	chromosome:NC_017275.1/CP002426.1	-	1	2854	2692	2/16/11	5/2/17	Complete Genome	"Archaea Centre, Department of Biology, University of Copenhagen, 2200 Copenhagen N, Denmark"	SAMN02602983	GCA_000189575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/575/GCA_000189575.1_ASM18957v1	21278296	HVE10/4
Bacillus subtilis subsp. subtilis str. NCIB 3610	535026	PRJNA29891	29891	Terrabacteria group	Firmicutes	4.29297	43.343	chromosome:NZ_CM000488.1/CM000488.1	ABQL01	80	4516	4217	7/23/08	5/18/17	Chromosome	Baylor College of Medicine	SAMN02469323	GCA_000186085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/085/GCA_000186085.1_ASM18608v1	18670626	NCIB 3610
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.03113	45.3	-	LRSU01	64	4824	4537	4/4/16	3/19/17	Scaffold	Health Canada	SAMN04441025	GCA_001608915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/915/GCA_001608915.1_ASM160891v1	-	F1419
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.02402	38	-	MLLQ01	579	2123	1804	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297030	GCA_001867685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/685/GCA_001867685.1_ASM186768v1	27118061	AWRIB203
Xanthomonas oryzae pv. oryzae	64187	PRJNA269450	269450	Proteobacteria	Gammaproteobacteria	4.25618	63.9	-	JXFU01	416	4243	3410	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252559	GCA_001928035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/035/GCA_001928035.1_ASM192803v1	-	IXO98
Xanthomonas citri subsp. citri	611301	PRJEB7183	265961	Proteobacteria	Gammaproteobacteria	5.15113	64.8	-	CDBA01	323	4730	4309	11/10/14	4/2/17	Contig	CIRAD	SAMEA2844847	GCA_000825205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/205/GCA_000825205.1_XACLG98	-	LG98
Brucella abortus 877/67	1160206	PRJNA173628	173628	Proteobacteria	Alphaproteobacteria	3.27858	57.2	-	AQJL01	9	3368	3150	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00811167	GCA_000370325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/325/GCA_000370325.1_Bruc_abor_877_67_V1	-	877/67
Francisella tularensis subsp. tularensis str. SCHU S4 substr. NR-28534	1341656	PRJNA217348	217348	Proteobacteria	Gammaproteobacteria	1.89297	32.3	-	JIDW01	2	1927	1665	4/11/14	4/2/17	Contig	Broad Institute	SAMN02335346	GCA_000628925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/925/GCA_000628925.1_Fran_tula_Schu_S4_NR-28534_V1	-	Schu S4 substr. NR-28534
Clostridioides difficile CD9	1151254	PRJNA85681	85681	Terrabacteria group	Firmicutes	4.31046	28.9	-	AVGK01	87	4095	3895	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01978895	GCA_000448865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/865/GCA_000448865.2_ASM44886v2	-	CD9
Vibrio cholerae HC-39A1	991960	PRJNA63927	63927	Proteobacteria	Gammaproteobacteria	4.02243	47.5	-	ALDM01	106	3824	3624	10/4/12	3/23/17	Scaffold	Institute for Genome Sciences	SAMN00622037	GCA_000302775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/775/GCA_000302775.1_ASM30277v1	-	HC-39A1
Ralstonia solanacearum CFBP2957	859656	PRJEA50685	50685	Proteobacteria	Betaproteobacteria	3.41739	66.5	chromosome:FP885897.1	-	1	3375	3229	6/22/10	2/27/15	Chromosome	CIRAD UMR	SAMEA2272283	GCA_000197855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/197/855/GCA_000197855.1_ASM19785v1	-	CFBP2957
Bacillus thuringiensis	1428	PRJNA318331	318331	Terrabacteria group	Firmicutes	5.85754	35	-	LXLK01	187	6360	5848	10/12/16	4/5/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04819578	GCA_001756265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/265/GCA_001756265.1_ASM175626v1	-	GOE6
Chlamydia trachomatis A/5291	1071754	PRJEA71067	71067	PVC group	Chlamydiae	1.05153	41.2643	chromosome:NC_020939.1/HE601810.1; plasmid pA5291:NC_020946.1/HE603210.1	-	2	984	913	3/13/12	3/23/17	Chromosome	Sanger Institute	SAMEA2272284	GCA_000318545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/545/GCA_000318545.1_ASM31854v1	-	A/5291
Caldicellulosiruptor kronotskyensis 2002	632348	PRJNA52409	52409	Terrabacteria group	Firmicutes	2.84379	35.1	chromosome:NC_014720.1/CP002330.1	-	1	2624	2454	11/17/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713565	GCA_000166775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/775/GCA_000166775.1_ASM16677v1	21216991	2002
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.10547	67	-	MURD01	149	7677	7249	2/10/17	4/2/17	Contig	University of British Columbia	SAMN05001840	GCA_001991715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/715/GCA_001991715.1_ASM199171v1	-	VC8945
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.18098	38.3	-	NGPQ01	91	2154	1995	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848388	GCA_002253965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/965/GCA_002253965.1_ASM225396v1	-	111b
Bacteroides fragilis str. S6L3	1339317	PRJNA206160	206160	FCB group	Bacteroidetes/Chlorobi group	5.30788	43.4	-	JGDY01	119	4804	4502	3/20/14	4/2/17	Contig	IGS	SAMN02314559	GCA_000599225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/225/GCA_000599225.1_ASM59922v1	-	S6L3
Shigella sonnei	624	PRJNA385907	385907	Proteobacteria	Gammaproteobacteria	4.66319	50.4	-	NGWA01	486	5314	4214	6/6/17	8/4/17	Contig	Christian Medical College	SAMN06920484	GCA_002174625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/625/GCA_002174625.1_ASM217462v1	-	FC1659
Legionella pneumophila subsp. pneumophila	91891	PRJNA239272	239272	Proteobacteria	Gammaproteobacteria	3.43797	38.3	-	JFIH01	61	3117	2992	3/7/14	3/24/17	Scaffold	Beijing Institute of Microbiology and Epidemiology	SAMN02650972	GCA_000586215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/215/GCA_000586215.1_ATCC_35096	-	ATCC 35096
Vibrio vulnificus	672	PRJNA299128	299128	Proteobacteria	Gammaproteobacteria	4.86823	46.7	-	LMXY01	82	4538	4317	12/7/16	4/6/17	Scaffold	Exeter University	SAMN04194063	GCA_001890545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/545/GCA_001890545.1_ASM189054v1	-	99-743
Pseudomonas syringae USA007	1357288	PRJNA211417	211417	Proteobacteria	Gammaproteobacteria	5.97094	58.9	-	AVDY02	369	5479	5163	8/20/13	3/24/17	Contig	University of Arizona	SAMN02471549	GCA_000452545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/545/GCA_000452545.2_USA_092313_2.0	24459267	USA007
Streptococcus suis YS10	1214186	PRJNA171448	171448	Terrabacteria group	Firmicutes	2.22046	41	-	ALMA01	54	2282	2104	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469507	GCA_000440955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/955/GCA_000440955.1_version1	-	YS10
Streptococcus agalactiae MRI Z1-039	1154870	PRJNA86399	86399	Terrabacteria group	Firmicutes	1.98521	35	-	ALSA01	176	2209	1953	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993336	GCA_000287975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/975/GCA_000287975.1_ASM28797v1	-	MRI Z1-039
Sulfolobus islandicus L.S.2.15	429572	PRJNA18987	18987	TACK group	Crenarchaeota	2.73627	35.1	chromosome:NC_012589.1/CP001399.1	-	1	3021	2768	4/24/09	3/30/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598420	GCA_000022385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/385/GCA_000022385.1_ASM2238v1	19435847	L.S.2.15
Sulfolobus islandicus M.14.25	427317	PRJNA18871	18871	TACK group	Crenarchaeota	2.60883	35.1	chromosome:NC_012588.1/CP001400.1	-	1	2879	2677	4/24/09	3/30/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598416	GCA_000022405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/405/GCA_000022405.1_ASM2240v1	19435847	M.14.25
Bifidobacterium longum	216816	PRJEB18553	373869	Terrabacteria group	Actinobacteria	2.41363	60.1	-	FTRI01	82	2163	1960	2/8/17	4/6/17	Contig	University of Tromso	SAMEA51817168	GCA_900157145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/145/GCA_900157145.1_Bifido_03_v1	-	-
Shigella flexneri	623	PRJNA315925	315925	Proteobacteria	Gammaproteobacteria	4.62053	50.5	-	LVIG01	476	5313	4311	5/20/16	3/5/17	Contig	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04570174	GCA_001649215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/215/GCA_001649215.1_ASM164921v1	-	BJ4s02
Bacillus anthracis	1392	PRJNA243524	243524	Terrabacteria group	Firmicutes	5.48772	35.2	-	JMPV01	3	6106	5711	8/26/14	3/24/17	Scaffold	Los Alamos National Laboratory	SAMN02736983	GCA_000743825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/825/GCA_000743825.1_BHY_1	25301645	A.Br.003
Pseudomonas putida	303	PRJNA381373	381373	Proteobacteria	Gammaproteobacteria	5.67926	62.8	-	NBWC01	77	5339	5138	4/17/17	4/21/17	Scaffold	Beijing Advanced Innovation Center for Food Nutrition and Human Health	SAMN06675396	GCA_002094795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/795/GCA_002094795.1_ASM209479v1	-	DZ-C18
Leptospira interrogans serovar Pyrogenes str. Sri Lanka 46	1291354	PRJNA188973	188973	Spirochaetes	Spirochaetia	4.80984	35.1	-	AOWQ01	197	4466	4027	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920595	GCA_000342905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/905/GCA_000342905.1_CA_glsol053	-	Sri Lanka 46
Streptococcus pyogenes ABC020047395	1439158	PRJNA233280	233280	Terrabacteria group	Firmicutes	1.8784	38.6	-	JJFJ01	6	1936	1810	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567629	GCA_000629805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/805/GCA_000629805.1_Stre_pyog_ABC020047395_V1	-	ABC020047395
Prochlorococcus marinus str. NATL2A	59920	PRJNA13911	13911	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.8429	35.1	chromosome:NC_007335.2/CP000095.2	-	1	2006	1953	8/9/05	3/29/17	Complete Genome	DOE Joint Genome Institute	SAMN00623057	GCA_000012465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/465/GCA_000012465.1_ASM1246v1	18159947	NATL2A
Bacillus thuringiensis	1428	PRJNA299545	299545	Terrabacteria group	Firmicutes	6.22794	35.0998	chromosome:NZ_CP013055.1/CP013055.1; plasmid pYWC2-8-1:NZ_CP013056.1/CP013056.1; plasmid pYWC2-8-2:NZ_CP013057.1/CP013057.1; plasmid pYWC2-8-3:NZ_CP013058.1/CP013058.1; plasmid pYWC2-8-4:NZ_CP013059.1/CP013059.1; plasmid pYWC2-8-5:NZ_CP013060.1/CP013060.1; plasmid pYWC2-8-6:NZ_CP013061.1/CP013061.1	-	7	6697	6244	10/30/15	4/4/17	Complete Genome	Sichuan Agricultural University	SAMN04210076	GCA_001420855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/855/GCA_001420855.1_ASM142085v1	-	YWC2-8
Streptococcus pneumoniae	1313	PRJNA229402	229402	Terrabacteria group	Firmicutes	2.11628	39.7	-	JFIX01	139	2254	2016	10/2/14	3/10/17	Scaffold	Harvard Medical School / Massachusetts Eye and Ear Infirmary	SAMN02641373	GCA_000762605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/605/GCA_000762605.1_Sp_3435.v1.0	-	ECC_3435
Bacillus thuringiensis	1428	PRJNA317300	317300	Terrabacteria group	Firmicutes	6.11129	35.0942	chromosome:NZ_CP015150.1/CP015150.1; plasmid pBTBC1:NZ_CP015151.1/CP015151.1; plasmid pBTBC2:NZ_CP015152.1/CP015152.1; plasmid pBTBC3:NZ_CP015153.1/CP015153.1; plasmid pBTBC4:NZ_CP015154.1/CP015154.1; plasmid pBTBC5:NZ_CP015155.1/CP015155.1; plasmid pBTBC6:NZ_CP015156.1/CP015156.1	-	7	6543	6085	4/12/16	4/5/17	Complete Genome	Tianjin University	SAMN04605079	GCA_001618665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/665/GCA_001618665.1_ASM161866v1	-	Bc601
Mycobacterium tuberculosis 1821ADB40	1334080	PRJNA203192	203192	Terrabacteria group	Actinobacteria	4.41153	65.6	chromosome:NZ_CP009202.1/CP009202.1	-	1	4285	4129	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837654	GCA_001997565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/565/GCA_001997565.1_ASM199756v1	27261264	1821ADB40
Haemophilus influenzae	727	PRJNA316657	316657	Proteobacteria	Gammaproteobacteria	1.90689	38.1	-	LVZJ01	29	1955	1817	4/14/17	4/21/17	Contig	Genomic Research Laboratory (GRL)	SAMN04590169	GCA_002093275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/275/GCA_002093275.1_ASM209327v1	27756711	GE146
Lactococcus lactis subsp. lactis CV56	929102	PRJNA60377	60377	Terrabacteria group	Firmicutes	2.51874	35.0942	chromosome:NC_017486.1/CP002365.1; plasmid pCV56A:NC_017483.1/CP002366.1; plasmid pCV56B:NC_017487.1/CP002367.1; plasmid pCV56C:NC_017484.1/CP002368.1; plasmid pCV56D:NC_017485.1/CP002369.1; plasmid pCV56E:NC_017488.1/CP002370.1	-	6	2571	2380	3/18/11	3/30/17	Complete Genome	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN02603398	GCA_000192705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/705/GCA_000192705.1_ASM19270v1	21460077	CV56
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.1117	69.1	-	LMVZ01	185	4871	4614	4/4/16	4/5/17	Contig	Robert Koch Institute	SAMN04229411	GCA_001610545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/545/GCA_001610545.1_ASM161054v1	-	MAH-E-106
Lactococcus lactis subsp. lactis	1360	PRJNA294255	294255	Terrabacteria group	Firmicutes	2.67432	34.8	-	LKLU01	149	2700	2534	12/4/15	4/4/17	Contig	Radboudumc	SAMN04026641	GCA_001456785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/785/GCA_001456785.1_ASM145678v1	-	M20
Bacillus cereus AH1272	526993	PRJNA29697	29697	Terrabacteria group	Firmicutes	5.78954	35.2	chromosome:NZ_CM000740.1/CM000740.1	ACMS01	1	12219	11541	4/30/09	6/15/17	Chromosome	Naval Medical Research Center	SAMN00727676	GCA_000161395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/395/GCA_000161395.1_ASM16139v1	22645259	AH1272
Staphylococcus epidermidis CIM37	1344990	PRJNA207996	207996	Terrabacteria group	Firmicutes	2.57517	31.9	-	ATDE02	277	2538	2393	7/2/13	3/24/17	Contig	Max-Planck-Institute for Evolutionary Biology	SAMN02470522	GCA_000418105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/105/GCA_000418105.2_CIM37_v2	24435862	CIM37
Leptospira interrogans serovar Copenhageni	44275	PRJNA231221	231221	Spirochaetes	Spirochaetia	4.63057	35.0924	chromosome:NZ_CP020414.1/CP020414.1; plasmid unnamed1:NZ_CP020413.1/CP020413.1	-	2	4132	3695	3/29/17	4/10/17	Complete Genome	US Food and Drug Administration 	SAMN04875540	GCA_002073495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/495/GCA_002073495.1_ASM207349v1	-	FDAARGOS_203
Yersinia pestis subsp. microtus bv. Caucasica	385966	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.61075	47.6	-	MIEB01	171	4445	4098	1/26/17	3/29/17	Scaffold	SRCAMB	SAMN05521424	GCA_001972415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/415/GCA_001972415.1_ASM197241v1	-	SCPM-O-B-6983
Pseudomonas fluorescens	294	PRJNA294689	294689	Proteobacteria	Gammaproteobacteria	6.7339	59.6	-	LJXB01	94	6256	5946	10/16/15	4/4/17	Contig	Los Alamos National Laboratory	SAMN04028675	GCA_001317545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/545/GCA_001317545.1_CBN_34	-	S613
Bacillus thuringiensis serovar morrisoni	1441	PRJNA271502	271502	Terrabacteria group	Firmicutes	6.1799	35.0858	chromosome:NZ_CP010577.1/CP010577.1; plasmid pBMB232:NZ_CP010578.1/CP010578.1; plasmid pBMB48:NZ_CP010583.1/CP010583.1; plasmid pBMB51:NZ_CP010582.1/CP010582.1; plasmid pBMB68:NZ_CP010581.1/CP010581.1; plasmid pBMB76:NZ_CP010580.1/CP010580.1; plasmid pBMB92:NZ_CP010579.1/CP010579.1	-	7	6554	6132	3/4/15	4/3/17	Complete Genome	Huazhong Agricultural University	SAMN03274640	GCA_000940785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/785/GCA_000940785.1_ASM94078v1	-	BGSC 4AA1
Thermoanaerobacterium saccharolyticum JW/SL-YS485	1094508	PRJNA73961	73961	Terrabacteria group	Firmicutes	2.87935	35.0792	chromosome:CP003184.1;  THSA-485A:NC_018264.1/CP003186.1; plasmid pMU3262:CP003185.1	-	3	2931	2840	6/1/12	8/27/14	Complete Genome	Oak Ridge National Laboratory	SAMN02603686	GCA_000307585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/585/GCA_000307585.2_ASM30758v2	24907337	JW/SL-YS485
Bacillus thuringiensis HD1002	1452729	PRJNA236049	236049	Terrabacteria group	Firmicutes	6.5727	35.0677	chromosome:NZ_CP009351.1/CP009351.1; plasmid 1:NZ_CP009349.1/CP009349.1; plasmid 2:NZ_CP009348.1/CP009348.1; plasmid 3:NZ_CP009347.1/CP009347.1; plasmid 4:NZ_CP009350.1/CP009350.1; plasmid 5:NZ_CP009346.1/CP009346.1; plasmid 6:NZ_CP009345.1/CP009345.1; plasmid 7:NZ_CP009344.1/CP009344.1	-	8	7032	6614	2/10/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03010437	GCA_000835025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/835/025/GCA_000835025.1_ASM83502v1	25931591	HD1002
Leptospira interrogans serovar Linhai str. 56609	1395589	PRJNA217894	217894	Spirochaetes	Spirochaetia	4.91565	35.0663	chromosome 1:NZ_CP006723.1/CP006723.1; chromosome 2:NZ_CP006724.1/CP006724.1; plasmid lcp1:NZ_CP006725.1/CP006725.1; plasmid lcp2:NZ_CP006726.1/CP006726.1; plasmid lcp3:NZ_CP006727.1/CP006727.1	-	5	4466	4057	3/4/15	4/11/17	Complete Genome	"Department of Medical Microbiology and Parasitology, Institutes of Medical Science, Shanghai Jiao Tong University School of Medicine"	SAMN03375751	GCA_000941035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/035/GCA_000941035.1_ASM94103v1	-	56609
Bacillus thuringiensis	1428	PRJNA344831	344831	Terrabacteria group	Firmicutes	5.87824	35.0637	chromosome:NZ_CP017577.1/CP017577.1; plasmid PSCG11:NZ_CP017575.1/CP017575.1; plasmid PSCG364:NZ_CP017574.1/CP017574.1; plasmid PSCG5:NZ_CP017576.1/CP017576.1; plasmid PSCG61:NZ_CP017573.1/CP017573.1	-	5	6197	5827	6/6/17	6/8/17	Complete Genome	Bacillus thuringiensis	SAMN05846296	GCA_002173755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/755/GCA_002173755.1_ASM217375v1	-	SCG04-02
Lactobacillus crustorum	392416	PRJNA344515	344515	Terrabacteria group	Firmicutes	2.31648	35.0628	chromosome:NZ_CP017996.1/CP017996.1; plasmid unnamed1:NZ_CP017997.1/CP017997.1; plasmid unnamed2:NZ_CP017998.1/CP017998.1	-	3	2275	2137	1/13/17	4/16/17	Complete Genome	Northwest A&F University	SAMN05893358	GCA_001951175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/175/GCA_001951175.1_ASM195117v1	-	MN047
Pseudomonas fluorescens	294	PRJNA244621	244621	Proteobacteria	Gammaproteobacteria	6.00758	60.5	-	JJOE01	94	5551	5329	11/16/15	4/4/17	Contig	Nanjing Forestry University	SAMN02727819	GCA_001444295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/295/GCA_001444295.1_Pseudomonas_fluorescens_GcM5-1A	26517369	GcM5-1A
Yersinia pestis subsp. microtus bv. Caucasica	385966	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.55852	47.6	-	MIDX01	176	4418	4058	1/26/17	3/29/17	Scaffold	SRCAMB	SAMN05521420	GCA_001972465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/465/GCA_001972465.1_ASM197246v1	-	SCPM-O-B-7037
Bacillus thuringiensis serovar tolworthi	1442	PRJDB3909	284905	Terrabacteria group	Firmicutes	6.87059	35.0603	chromosome Unknown:NZ_AP014864.1/AP014864.1; plasmid pKK1:NZ_AP014865.1/AP014865.1; plasmid pKK2:NZ_AP014866.1/AP014866.1; plasmid pKK3:NZ_AP014867.1/AP014867.1; plasmid pKK4:NZ_AP014868.1/AP014868.1; plasmid pKK5:NZ_AP014869.1/AP014869.1; plasmid pKK6:NZ_AP014870.1/AP014870.1; plasmid pKK7:NZ_AP014871.1/AP014871.1; plasmid pKK8:NZ_AP014872.1/AP014872.1	-	9	7265	6723	5/23/15	4/4/17	Complete Genome	Saga University	SAMD00030057	GCA_001548175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/175/GCA_001548175.1_ASM154817v1	26139717	Pasteur Institute Standard strain
Staphylococcus epidermidis MC16	1344997	PRJNA207989	207989	Terrabacteria group	Firmicutes	2.54246	31.8	-	ATCX02	246	2493	2355	7/2/13	3/24/17	Contig	Max-Planck-Institute for Evolutionary Biology	SAMN02470521	GCA_000418185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/185/GCA_000418185.2_MC16_v2	24435862	MC16
Bacillus cereus F	1126681	PRJNA78943	78943	Terrabacteria group	Firmicutes	5.25577	35.5007	chromosome:NZ_CM001787.1/CM001787.1	AHHI01	1	5657	5223	2/7/13	5/18/17	Chromosome	Institute of Chemical Biology an Fundamental Medicine	SAMN02469966	GCA_000338315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/338/315/GCA_000338315.1_BacF5	23908292	F
Lactococcus lactis subsp. lactis	1360	PRJNA294255	294255	Terrabacteria group	Firmicutes	2.52187	35.1	-	LKLV01	264	2631	2378	12/4/15	4/4/17	Contig	Radboudumc	SAMN04026651	GCA_001456795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/795/GCA_001456795.1_ASM145679v1	-	ML8
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.27194	69	-	LNAJ01	205	5004	4724	4/4/16	4/5/17	Contig	Robert Koch Institute	SAMN04229415	GCA_001610565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/565/GCA_001610565.1_ASM161056v1	-	MAH-E-149-2
Bacillus cereus	1396	PRJNA336246	336246	Terrabacteria group	Firmicutes	5.83697	35.0584	chromosome:NZ_CP017060.1/CP017060.1; plasmid pFORC47_1:NZ_CP018741.1/CP018741.1; plasmid pFORC47_2:NZ_CP018742.1/CP018742.1	-	3	6102	5695	7/17/17	7/19/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN05506965	GCA_002220285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/285/GCA_002220285.1_ASM222028v1	-	FORC_047
Haemophilus influenzae	727	PRJNA316656	316656	Proteobacteria	Gammaproteobacteria	1.82653	38	-	LVZI01	27	1831	1700	4/14/17	4/21/17	Contig	Genomic Research Laboratory (GRL)	SAMN04590168	GCA_002093285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/285/GCA_002093285.1_ASM209328v1	27756711	GE117
Mycobacterium tuberculosis 1821ADB41	1334081	PRJNA203193	203193	Terrabacteria group	Actinobacteria	4.41153	65.5	chromosome:NZ_CP009203.1/CP009203.1	-	1	4280	4061	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837655	GCA_001997585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/585/GCA_001997585.1_ASM199758v1	27261264	1821ADB41
Bacillus thuringiensis	1428	PRJNA377597	377597	Terrabacteria group	Firmicutes	6.30377	35.052	chromosome:NZ_CP020002.1/CP020002.1; plasmid unnamed1:NZ_CP020003.1/CP020003.1; plasmid unnamed2:NZ_CP020004.1/CP020004.1; plasmid unnamed3:NZ_CP020005.1/CP020005.1	-	4	6669	6179	3/13/17	3/31/17	Complete Genome	Nankai University	SAMN06473083	GCA_002025105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/105/GCA_002025105.1_ASM202510v1	-	L-7601
Streptococcus pneumoniae	1313	PRJNA229402	229402	Terrabacteria group	Firmicutes	2.12209	39.6	-	JFIW01	91	2248	1999	10/2/14	3/10/17	Scaffold	Harvard Medical School / Massachusetts Eye and Ear Infirmary	SAMN02641377	GCA_000762625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/625/GCA_000762625.1_Sp_3431.v1.0	-	ECC_3431
Bacillus cereus G9842	405531	PRJNA17733	17733	Terrabacteria group	Firmicutes	5.73682	35.0479	chromosome:NC_011772.1/CP001186.1; plasmid pG9842_140:NC_011774.1/CP001188.1; plasmid pG9842_209:NC_011775.1/CP001187.1	-	3	6073	5719	12/19/08	5/18/17	Complete Genome	TIGR	SAMN02604060	GCA_000021305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/305/GCA_000021305.1_ASM2130v1	-	G9842
Bacillus thuringiensis HD-771	1218175	PRJNA171845	171845	Terrabacteria group	Firmicutes	6.43837	35.0432	chromosome:NC_018500.1/CP003752.1; plasmid p01:NC_018486.1/CP003753.1; plasmid p02:NC_018501.1/CP003754.1; plasmid p03:NC_018487.1/CP003755.1; plasmid p04:NC_018488.1/CP003756.1; plasmid p05:NC_018502.1/CP003757.1; plasmid p06:NC_018489.1/CP003758.1; plasmid p07:NC_018503.1/CP003759.1; plasmid p08:NC_018490.1/CP003760.1	-	9	6912	6477	8/21/12	5/18/17	Complete Genome	Los Alamos National Laboratory	SAMN02603565	GCA_000292455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/455/GCA_000292455.1_ASM29245v1	-	HD-771
Streptococcus pyogenes ABC020044412	1439136	PRJNA233275	233275	Terrabacteria group	Firmicutes	1.89422	38.5	-	JJFK01	2	1973	1847	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567624	GCA_000629825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/825/GCA_000629825.1_Stre_pyog_ABC020044412_V1	-	ABC020044412
Leptospira interrogans serovar Szwajizak str. Szwajizak	1291310	PRJNA189023	189023	Spirochaetes	Spirochaetia	4.87979	35.2	-	AOUT01	250	4582	3991	3/1/13	5/18/17	Contig	J. Craig Venter Institute	SAMN01919802	GCA_000342925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/925/GCA_000342925.1_CA_glsol201	-	Szwajizak
Pseudomonas putida	303	PRJEB16260	348876	Proteobacteria	Gammaproteobacteria	6.38341	60.6	-	FMXW01	21	5786	5636	10/20/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03097715	GCA_900104105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/105/GCA_900104105.1_IMG-taxon_2600255318_annotated_assembly	-	NFIX47
Bacillus anthracis	1392	PRJNA264742	264742	Terrabacteria group	Firmicutes	5.45101	35.1	-	JTAP01	37	6061	5685	12/4/14	3/25/17	Scaffold	Georgia Institute of Technology	SAMN03165111	GCA_000793525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/525/GCA_000793525.1_ASM79352v1	-	2000031008
Shigella flexneri	623	PRJNA315925	315925	Proteobacteria	Gammaproteobacteria	4.51337	50.7	-	LVII01	398	5203	4138	5/20/16	8/8/17	Contig	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04570176	GCA_001649255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/255/GCA_001649255.1_ASM164925v1	-	BJ4s04
Bifidobacterium longum	216816	PRJEB18553	373869	Terrabacteria group	Actinobacteria	2.42182	60	-	FTRO01	48	2137	1987	2/8/17	4/6/17	Contig	University of Tromso	SAMEA51819418	GCA_900157155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/155/GCA_900157155.1_Bifido_06_v1	-	-
Lactobacillus gasseri DSM 14869	1380360	PRJNA213723	213723	Terrabacteria group	Firmicutes	1.95155	35.0427	chromosome:NZ_CP006803.1/CP006803.1; plasmid pEB01-1:NZ_CP008839.1/CP008839.1; plasmid pEB01-2:NZ_CP008840.1/CP008840.1	-	3	1922	1715	9/8/17	9/11/17	Complete Genome	Karolinska Institutet	SAMN07605139	GCA_002287905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/905/GCA_002287905.1_ASM228790v1	-	DSM 14869
Bacillus thuringiensis	1428	PRJNA382491	382491	Terrabacteria group	Firmicutes	6.44517	35.0273	chromosome:CP020754.1; plasmid pLDW-16:CP020755.1; plasmid pLDW-17:CP020756.1; plasmid pLDW-18:CP020757.1; plasmid pLDW-19:CP020758.1; plasmid pLDW-20:CP020759.1; plasmid pLDW-21:CP020760.1	-	7	6915	4424	8/8/17	8/8/17	Complete Genome	Kyungpook National University	SAMN06706903	GCA_002243685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/685/GCA_002243685.1_ASM224368v1	-	ATCC 10792
Streptococcus agalactiae LDS 617	1154884	PRJNA86427	86427	Terrabacteria group	Firmicutes	2.02891	35.5	-	ALSG01	132	2250	1930	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993319	GCA_000288035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/035/GCA_000288035.1_ASM28803v1	-	LDS 617
Streptococcus suis YS12	1214187	PRJNA171449	171449	Terrabacteria group	Firmicutes	2.07854	41.1	-	ALMB01	57	2106	1944	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469508	GCA_000440975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/975/GCA_000440975.1_version1	-	YS12
Pseudomonas syringae UB303	1357287	PRJNA211415	211415	Proteobacteria	Gammaproteobacteria	5.98884	59.2	-	AVDZ02	478	5460	5124	8/20/13	3/24/17	Contig	University of Arizona	SAMN02471550	GCA_000452565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/565/GCA_000452565.2_UB303_092313_2.0	24459267	UB303
Vibrio vulnificus	672	PRJNA299132	299132	Proteobacteria	Gammaproteobacteria	4.91469	46.8	-	LMYB01	94	4695	4367	12/7/16	4/6/17	Scaffold	Exeter University	SAMN04194080	GCA_001890585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/585/GCA_001890585.1_ASM189058v1	-	ATL-9824
Legionella pneumophila subsp. pneumophila	91891	PRJNA239272	239272	Proteobacteria	Gammaproteobacteria	3.29915	38.2	-	JFII01	58	3013	2859	3/7/14	3/24/17	Scaffold	Beijing Institute of Microbiology and Epidemiology	SAMN02650971	GCA_000586235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/235/GCA_000586235.1_ATCC_33823	-	ATCC 33823
Shigella sonnei	624	PRJNA393761	393761	Proteobacteria	Gammaproteobacteria	4.56288	50.8	-	NMXS01	484	5234	4125	8/4/17	8/6/17	Contig	Christian Medical College	SAMN07340967	GCA_002241875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/875/GCA_002241875.1_ASM224187v1	-	FC1747
Bacteroides fragilis str. S6R6	1339321	PRJNA206164	206164	FCB group	Bacteroidetes/Chlorobi group	5.24681	43.5	-	JGDZ01	84	4736	4451	3/20/14	4/2/17	Contig	IGS	SAMN02314563	GCA_000599245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/245/GCA_000599245.1_ASM59924v1	-	S6R6
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.18271	38.3	-	NGPP01	99	2152	1991	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848389	GCA_002253975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/253/975/GCA_002253975.1_ASM225397v1	-	111f
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.13425	67	-	MURE01	236	7712	7272	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001841	GCA_001991735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/735/GCA_001991735.1_ASM199173v1	-	VC8946
Bacillus cereus C1L	1003239	PRJNA394634	394634	Terrabacteria group	Firmicutes	6.04755	35.0184	chromosome:NZ_CP022445.1/CP022445.1; plasmid pC1L1:NZ_CP022446.1/CP022446.1; plasmid pC1L69:NZ_CP022447.1/CP022447.1; plasmid pC1L8:NZ_CP022448.1/CP022448.1	-	4	6340	5874	7/24/17	7/28/17	Complete Genome	National Chiayi University	SAMN07357037	GCA_002224345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/345/GCA_002224345.1_ASM222434v1	-	C1L
Chlamydia trachomatis D/SotonD1	1071756	PRJEA71071	71071	PVC group	Chlamydiae	1.05008	41.2636	chromosome:NC_020967.1/HE601798.1; plasmid pSotonD1:NC_020986.1/HE603229.1	-	2	973	907	3/13/12	3/23/17	Chromosome	Sanger Institute	SAMEA2272791	GCA_000318585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/585/GCA_000318585.1_ASM31858v1	22406642	D/SotonD1
Bacillus thuringiensis	1428	PRJNA318317	318317	Terrabacteria group	Firmicutes	5.35936	35.1	-	LXLF01	30	5733	5417	10/12/16	4/5/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04635980	GCA_001757675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/675/GCA_001757675.1_ASM175767v1	-	GOE1
Ralstonia solanacearum	305	PRJNA347535	347535	Proteobacteria	Betaproteobacteria	4.62013	60.6	-	MLYT01	329	-	-	12/23/16	12/23/16	Scaffold	"Shanghai Center for Plant Stress Biology,  Shanghai Institutes of Biological Sciences, CAS"	SAMN05892025	GCA_001920885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/885/GCA_001920885.1_ASM192088v1	-	FJAT-91
Vibrio cholerae HC-50A1	991967	PRJNA63941	63941	Proteobacteria	Gammaproteobacteria	3.93922	47.8	-	ALDS01	126	3756	3462	10/4/12	3/23/17	Scaffold	Institute for Genome Sciences	SAMN00622024	GCA_000302835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/835/GCA_000302835.1_ASM30283v1	-	HC-50A1
Clostridioides difficile CD13	1151255	PRJNA85683	85683	Terrabacteria group	Firmicutes	4.10909	28.7	-	AVGL01	52	3844	3673	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766584	GCA_000448885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/885/GCA_000448885.2_ASM44888v2	-	CD13
Francisella tularensis subsp. holarctica BD11-00177	1244086	PRJNA177784	177784	Proteobacteria	Gammaproteobacteria	1.80379	32.2	-	JGVV01	103	1963	1546	5/6/14	4/2/17	Contig	Swedish Defense Research Agancy	SAMN02690826	GCA_000681495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/495/GCA_000681495.1_Ray_Assembler	24501637	BD11-00177
Brucella abortus 88/217	1198697	PRJNA176537	176537	Proteobacteria	Alphaproteobacteria	3.27125	57.2	-	AQJM01	10	3335	3062	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN01047748	GCA_000370345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/345/GCA_000370345.1_Bruc_abor_88_217_V1	-	88/217
Xanthomonas citri subsp. citri	611301	PRJEB7184	265962	Proteobacteria	Gammaproteobacteria	5.26058	64.8	-	CDMO01	300	4831	4396	1/13/15	4/2/17	Contig	CIRAD	SAMEA2844846	GCA_000825225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/225/GCA_000825225.1_XAC4311	-	JK143-11
Xanthomonas oryzae pv. oryzae	64187	PRJNA269451	269451	Proteobacteria	Gammaproteobacteria	4.27544	63.9	-	JXFV01	405	4268	3426	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252560	GCA_001928085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/085/GCA_001928085.1_ASM192808v1	-	IXO99
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.93173	38.1	-	MLLR01	281	1951	1724	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297031	GCA_001867695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/695/GCA_001867695.1_ASM186769v1	27118061	AWRIB214
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.12799	45.2	-	LRTD01	72	5003	4707	4/4/16	3/19/17	Scaffold	Health Canada	SAMN04441020	GCA_001608975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/975/GCA_001608975.1_ASM160897v1	-	A3EZ711
Bacillus subtilis subsp. subtilis str. AUSI98	565143	PRJNA32097	32097	Terrabacteria group	Firmicutes	4.35315	43.5	-	AFSF01	123	4606	4344	1/25/12	5/18/17	Scaffold	University of Maryland Institute for Genome Sciences	SAMN00000705	GCA_000245295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/295/GCA_000245295.1_ASM24529v1	22493193	AUSI98
Bacillus thuringiensis Bt407	527021	PRJNA176850	176850	Terrabacteria group	Firmicutes	6.13434	35.0166	chromosome:NC_018877.1/CP003889.1; plasmid BTB_15p:NC_018880.1/CP003892.1; plasmid BTB_2p:NC_018885.1/CP003897.1; plasmid BTB_502p:NC_018878.1/CP003890.1; plasmid BTB_5p:NC_018884.1/CP003896.1; plasmid BTB_6p:NC_018883.1/CP003895.1; plasmid BTB_78p:NC_018879.1/CP003891.1; plasmid BTB_7p:NC_018882.1/CP003894.1; plasmid BTB_8p:NC_018881.1/CP003893.1; plasmid BTB_9p:NC_018886.1/CP003898.1	-	10	6757	6349	10/18/12	6/15/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology; Goettingen Genomics Laboratory"	SAMN02603279	GCA_000306745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/745/GCA_000306745.1_ASM30674v1	23405326	-
Clostridium botulinum D str. 16868	1443117	PRJNA233459	233459	Terrabacteria group	Firmicutes	3.08363	28.1696	plasmid p1Cb16868:NZ_CM003334.1/CM003334.1; plasmid p4Cb16868:NZ_CM003335.1/CM003335.1	JENR01	129	2960	2780	6/20/14	3/26/17	Contig	National Veterinary Institute (SVA)	SAMN02593747	GCA_000724345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/345/GCA_000724345.2_16868_1.0	25254374	16868
Enterococcus faecalis ERV116	1134786	PRJNA81961	81961	Terrabacteria group	Firmicutes	3.06975	37.4	-	ALZK01	54	3133	3004	8/27/12	3/27/17	Scaffold	Washington University	SAMN02299462	GCA_000294025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/025/GCA_000294025.2_ASM29402v2	-	ERV116
Streptococcus mutans TCI-62	1074101	PRJNA71957	71957	Terrabacteria group	Firmicutes	1.80483	37	-	AGMR01	135	1838	1720	10/6/11	3/22/17	Contig	JCVI	SAMN02436361	GCA_000230045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/045/GCA_000230045.2_SMUT3-NEX_10-62	-	TCI-62
Neisseria gonorrhoeae	485	PRJNA287475	287475	Proteobacteria	Betaproteobacteria	2.12468	52.4706	plasmid pNG869_1:NZ_CM003346.1/CM003346.1; plasmid pNG869_2:NZ_CM003347.1/CM003347.1; plasmid pNG869_3:NZ_CM003348.1/CM003348.1	LFJW01	220	2460	2157	6/25/15	4/11/17	Contig	UNIVERSITY OF MALAYA	SAMN03782447	GCA_001039435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/435/GCA_001039435.1_ASM103943v1	27570316	NG_869
Enterococcus faecium 504	1134805	PRJNA81997	81997	Terrabacteria group	Firmicutes	2.61773	37.9	-	AMBM01	103	2673	2492	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299480	GCA_000295275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/275/GCA_000295275.2_ASM29527v2	-	504
Stenotrophomonas maltophilia	40324	PRJNA323844	323844	Proteobacteria	Gammaproteobacteria	4.48339	66.5	-	LZPC01	93	4187	4014	6/24/16	4/5/17	Contig	"UMR5557, University of Lyon"	SAMN05190066	GCA_001676445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/445/GCA_001676445.1_ASM167644v1	-	SmSOFb1
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12566	41.2	-	CWDF01	74	2042	1871	6/24/15	3/26/17	Contig	SC	SAMEA1032831	GCA_001176305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/305/GCA_001176305.1_6903_6_4	-	EQUI0149
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.29249	40.3	-	LQES01	30	2156	2056	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366540	GCA_001929765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/765/GCA_001929765.1_ASM192976v1	-	2633PM
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.83059	46.8	-	JTHV01	240	2950	2596	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196634	GCA_001656875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/875/GCA_001656875.1_ASM165687v1	-	Lrh4
Brucella melitensis UK14/06	1160217	PRJNA173577	173577	Proteobacteria	Alphaproteobacteria	3.29567	57.2	-	AQKF01	7	3375	3145	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN00811216	GCA_000370725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/725/GCA_000370725.1_Bruc_meli_UK14_06_V1	-	UK14/06
Leptospira interrogans serovar Lai str. IPAV	573825	PRJNA32553	32553	Spirochaetes	Spirochaetia	4.70853	35.0076	chromosome 1:NC_017551.1/CP001221.1; chromosome 2:NC_017552.1/CP001222.1	-	2	4210	3901	10/20/11	5/19/17	Complete Genome	Shanghai Jiao Tong University	SAMN02603861	GCA_000231175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/175/GCA_000231175.1_ASM23117v1	21423275	IPAV
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.39671	53.5	-	NDHV01	75	2326	2145	4/28/17	5/3/17	Contig	Institute for Medical Research	SAMN06660208	GCA_002115265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/265/GCA_002115265.1_ASM211526v1	-	c25
Mycoplasma pneumoniae	2104	PRJNA291007	291007	Terrabacteria group	Tenericutes	0.820885	40	-	LHQG01	16	809	694	9/22/15	4/4/17	Scaffold	Centre for genomic regulation (CRG)	SAMN03897317	GCA_001296765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/765/GCA_001296765.1_ASM129676v1	26335586	Mympn_6009
Yersinia enterocolitica subsp. palearctica 556/8265	940287	PRJEA61335	61335	Proteobacteria	Gammaproteobacteria	4.52139	47	-	CACU01	14	4121	3838	3/24/11	5/19/17	Scaffold	Max von Pettenkofer-Institute	SAMEA2272355	GCA_000284935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/935/GCA_000284935.1_ASM28493v1	-	556/8265
Serratia marcescens	615	PRJNA300566	300566	Proteobacteria	Gammaproteobacteria	5.11262	59.2	-	MEDA01	206	5052	4638	12/6/16	3/28/17	Contig	University of Wisconsin-Stout	SAMN04226222	GCA_001889685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/685/GCA_001889685.1_ASM188968v1	28002470	sicaria (Ss1)
Lactobacillus plantarum	1590	PRJEB5195	277929	Terrabacteria group	Firmicutes	3.22477	44.4	-	CBZW01	67	3158	2947	3/15/15	3/27/17	Contig	VRIJE UNIVERSITEIT BRUSSEL	SAMEA3158485	GCA_001368775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/775/GCA_001368775.1_LP_newbler2.7	-	80
Campylobacter coli BIGS0005	1247730	PRJNA177352	177352	Proteobacteria	delta/epsilon subdivisions	1.58941	31.8	-	ANGP01	255	1700	1522	11/23/12	3/15/17	Contig	Swansea University	SAMN01795761	GCA_000314105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/105/GCA_000314105.1_ASM31410v1	23279096	BIGS0005
Burkholderia sp. MSMB2157WGS	1637928	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.07203	67.3	-	LPJG01	57	6579	6259	1/22/16	4/11/17	Contig	Northern Arizona University	SAMN03449585	GCA_001532755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/755/GCA_001532755.1_ASM153275v1	-	MSMB2157WGS
Propionibacterium acnes HL078PA1	765071	PRJNA49173	49173	Terrabacteria group	Actinobacteria	2.56696	60.1	-	ADZG01	44	2604	2444	8/5/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189237	GCA_000145535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/535/GCA_000145535.1_ASM14553v1	-	HL078PA1
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.51174	32.8	-	CUEI01	61	2506	2382	3/31/15	3/26/17	Contig	SC	SAMEA1035097	GCA_001236425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/425/GCA_001236425.1_7067_4_71	-	51-51
Enterobacter cloacae subsp. cloacae	336306	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.4404	54.4	-	JZYG01	86	5326	5101	3/19/15	3/25/17	Contig	JCVI	SAMN03283673	GCA_000958205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/205/GCA_000958205.1_ASM95820v1	-	42324
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.13271	55.9	-	FKYQ01	63	5963	5691	5/19/16	2/21/17	Scaffold	SC	SAMEA2273555	GCA_900083885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/885/GCA_900083885.1_12045_6_23	-	2880STDY5682470
Cronobacter sakazakii	28141	PRJNA329459	329459	Proteobacteria	Gammaproteobacteria	4.39801	57.3	-	MBSB01	430	4307	4001	4/17/17	4/21/17	Contig	Guangdong Institute of Microbiology	SAMN05413004	GCA_002094725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/725/GCA_002094725.1_ASM209472v1	28057934	cro2810A3
Mycobacterium abscessus 5S-0304	1001728	PRJNA65185	65185	Terrabacteria group	Actinobacteria	5.25308	64	-	AKTX01	7	5365	5205	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00728601	GCA_000271205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/205/GCA_000271205.1_ASM27120v1	-	5S-0304
Vibrio sp. JCM 19052	1460647	PRJDB1625	243821	Proteobacteria	Gammaproteobacteria	5.98283	45.5	-	BAXJ01	37	5537	5468	5/28/14	5/28/14	Contig	"Microbe Division/JCM, RIKEN BioResource Center"	SAMD00000383	GCA_000699205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/205/GCA_000699205.1_ASM69920v1	-	JCM 19052
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.63074	62.6	-	DCRC01	380	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456426	GCA_002323655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/655/GCA_002323655.1_ASM232365v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.1798	67.5	-	LPAP01	96	6496	6164	1/22/16	6/27/17	Contig	Northern Arizona University	SAMN03449352	GCA_001527165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/165/GCA_001527165.1_ASM152716v1	-	MSMB1605WGS
Corynebacterium pseudotuberculosis	1719	PRJNA256958	256958	Terrabacteria group	Actinobacteria	2.36223	52.1	-	MCOC01	6	2125	1696	1/23/17	1/23/17	Contig	Federal University of Para	SAMN05509219	GCA_001969175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/175/GCA_001969175.1_ASM196917v1	-	MB44
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	3.85613	38.8	-	MDIB01	195	3833	3607	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022861	GCA_001706415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/415/GCA_001706415.1_ASM170641v1	-	UKK-0538
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.18182	54.9	-	JZZW01	81	5074	4862	3/19/15	3/25/17	Contig	JCVI	SAMN03283639	GCA_000957775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/775/GCA_000957775.1_ASM95777v1	-	35010
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.32543	54.9	-	LPQH01	54	5234	4986	12/21/15	4/6/17	Contig	JCVI	SAMN04252901	GCA_001472155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/155/GCA_001472155.1_SMART_350.v1	-	SMART_350
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.22657	64.1	-	FSCP01	15	5291	5083	12/14/16	3/21/17	Scaffold	SC	SAMEA2259714	GCA_900133045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/045/GCA_900133045.1_11893_6_64	-	909
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.60982	66.6	-	LPFL01	83	7990	7619	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449485	GCA_001530185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/185/GCA_001530185.1_ASM153018v1	-	MSMB1486WGS
Pseudomonas sp. Root71	1736593	PRJNA297942	297942	Proteobacteria	Gammaproteobacteria	6.24993	60	-	LMHY01	30	5738	5513	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155862	GCA_001429045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/045/GCA_001429045.1_Root71	26633631	Root71
Streptomyces sp. CNH099	1137269	PRJNA169791	169791	Terrabacteria group	Actinobacteria	8.13892	73.8	-	AZWL01	99	7077	6689	1/3/14	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02597242	GCA_000514715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/715/GCA_000514715.1_ASM51471v1	-	CNH099
Bacillus sp. CCTCCAB-2014251	1938560	PRJNA362680	362680	Terrabacteria group	Firmicutes	5.08505	42.1	-	MTSR01	1	4917	4718	5/19/17	6/15/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN06245887	GCA_002153445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/445/GCA_002153445.1_ASM215344v1	-	CCTCCAB-2014251
Acinetobacter sp. 1289694	1310609	PRJNA194685	194685	Proteobacteria	Gammaproteobacteria	4.18964	38.7	-	JEWE01	141	4184	3837	2/25/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02380501	GCA_000580855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/855/GCA_000580855.1_ASM58085v1	-	1289694
Clostridium sp. CS1GBYEI2	2003590	PRJEB17666	353792	Terrabacteria group	Firmicutes	5.17085	43.9	-	FYAL01	19	-	-	6/6/17	6/6/17	Contig	Griffith University	SAMEA104102957	GCA_900185635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/185/635/GCA_900185635.1_CS1GBYEI2_assembly_1	-	-
Sphingomonas sp. CCH21-G11	1768749	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	3.60707	66.8	-	LSHX01	59	3461	3300	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299421	GCA_001555965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/965/GCA_001555965.1_ASM155596v1	-	CCH21-G11
Rhodococcus sp. Br-6	1522141	PRJDB5044	335882	Terrabacteria group	Actinobacteria	5.50839	68.6	-	BDGK01	27	5147	5016	8/9/16	4/13/17	Scaffold	Chiba University	SAMD00056695	GCA_001748445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/445/GCA_001748445.1_ASM174844v1	-	Br-6
Enterobacter cloacae complex sp. 35669	1619244	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.99701	55.7	-	JZZB01	66	4933	4746	3/19/15	4/10/17	Contig	JCVI	SAMN03283644	GCA_000957065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/065/GCA_000957065.1_ASM95706v1	-	35669
Staphylococcus sp. HMSC076H12	1739449	PRJNA300099	300099	Terrabacteria group	Firmicutes	2.37869	31.9	-	LTVQ01	70	2312	2217	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480371	GCA_001813975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/975/GCA_001813975.1_ASM181397v1	-	HMSC076H12
Corynebacterium sp. HMSC074H12	1739436	PRJNA300086	300086	Terrabacteria group	Actinobacteria	2.81004	60.9	-	LTWA01	76	2608	2461	10/17/16	4/17/17	Scaffold	The Genome Institute at Washington University	SAMN04480357	GCA_001813755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/755/GCA_001813755.1_ASM181375v1	-	HMSC074H12
Arthrobacter sp. D4	421054	PRJNA314014	314014	Terrabacteria group	Actinobacteria	4.81767	63.4	-	LUKC01	110	4497	4306	9/21/16	4/17/17	Scaffold	The University of Hong Kong	SAMN04527044	GCA_001742005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/005/GCA_001742005.1_ASM174200v1	27477918	D4
Bradyrhizobium sp. JGI 0001019-M21	1268334	PRJNA183568	183568	Proteobacteria	Alphaproteobacteria	0.23634	58	-	AXYG01	41	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441421	GCA_000485335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/335/GCA_000485335.1_ASM48533v1	-	JGI 0001019-M21
Streptococcus sp. HMSC066E07	1739488	PRJNA300138	300138	Terrabacteria group	Firmicutes	1.88713	38.9	-	LTUH01	65	1868	1738	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480406	GCA_001814695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/695/GCA_001814695.1_ASM181469v1	-	HMSC066E07
Mycobacterium sp. NAZ190054	1747766	PRJNA300678	300678	Terrabacteria group	Actinobacteria	6.09486	68.2	-	LMVQ01	592	6136	5339	2/2/16	4/11/17	Contig	Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion	SAMN04227060	GCA_001545925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/925/GCA_001545925.1_ASM154592v1	-	NAZ190054
Prevotella sp. CAG:873	1262936	PRJEB1023	206888	FCB group	Bacteroidetes/Chlorobi group	2.4782	51.4	-	CBJF01	145	2097	2055	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138697	GCA_000436235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/235/GCA_000436235.1_MGS873	-	-
Enterococcus sp. 6D12_DIV0197	1834184	PRJNA313452	313452	Terrabacteria group	Firmicutes	3.75993	42.9	-	NIBN01	3	3553	3354	6/6/17	6/8/17	Scaffold	Broad Institute	SAMN04634066	GCA_002174385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/385/GCA_002174385.1_ASM217438v1	-	6D12_DIV0197
Paenibacillus sp. FSL R7-0333	1926587	PRJNA343020	343020	Terrabacteria group	Firmicutes	7.7383	52.3	-	MRTW01	132	6727	6526	1/18/17	4/17/17	Contig	Cornell University	SAMN05929629	GCA_001955915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/915/GCA_001955915.1_ASM195591v1	-	FSL R7-0333
uncultured Ruminococcus sp.	165186	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.00482	43.1	-	FMEE01	17	2898	2845	8/16/16	8/16/16	Scaffold	SC	SAMEA3545226	GCA_900066095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/095/GCA_900066095.1_13414_6_1	-	-
Bacteroides sp. UBA1317	1946083	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.72774	39.6	-	DBTL01	175	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06454775	GCA_002307035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/035/GCA_002307035.1_ASM230703v1	28894102	-
Prochlorococcus sp. scB241_526N5	1471442	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.489145	31.1	-	JFKS01	187	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671313	GCA_000634655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/655/GCA_000634655.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. P093	1895622	PRJNA341040	341040	Proteobacteria	delta/epsilon subdivisions	1.59028	33.7	-	MJLA01	16	1647	1566	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687060	GCA_002138945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/945/GCA_002138945.1_ASM213894v1	28854596	P093
Rhizobium sp. NFR03	1566263	PRJEB16946	351092	Proteobacteria	Alphaproteobacteria	5.40304	62	-	FOGR01	34	5120	4942	10/29/16	8/3/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN03159406	GCA_900111275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/275/GCA_900111275.1_IMG-taxon_2599185156_annotated_assembly	-	NFR03
Mesorhizobium sp. AA22	1854057	PRJNA323411	323411	Proteobacteria	Alphaproteobacteria	8.1135	61.7	-	LYTO01	383	7932	7114	6/20/16	4/13/17	Contig	Curtin University	SAMN05178586	GCA_001672375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/375/GCA_001672375.1_AA22	-	AA22
Microbacterium sp. cf046	1761803	PRJEB17429	351651	Terrabacteria group	Actinobacteria	3.99381	68.9	-	FOZJ01	3	3696	3600	11/1/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487846	GCA_900114345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/345/GCA_900114345.1_IMG-taxon_2609459760_annotated_assembly	-	CF046
Bacillus velezensis	492670	PRJNA361060	361060	Terrabacteria group	Firmicutes	3.84009	46.6	-	MTID01	28	3847	3669	5/22/17	6/15/17	Contig	Ningbo First Hospital	SAMN06219885	GCA_002154115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/115/GCA_002154115.1_ASM215411v1	-	NB91
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.6117	35.4	-	LZGY01	207	2460	2278	7/21/16	7/21/16	Contig	University of Texas at Austin	SAMN05179603	GCA_001690305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/305/GCA_001690305.1_ASM169030v1	-	Fer2-1
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.87604	56.9	-	FXPJ01	111	6009	5650	4/28/17	5/6/17	Scaffold	SC	SAMEA2609448	GCA_900181285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/285/GCA_900181285.1_14936_3_9	-	3189STDY5864766
Staphylococcus argenteus	985002	PRJEB20633	390605	Terrabacteria group	Firmicutes	2.76091	32.3	-	FXWD01	94	2787	2569	6/15/17	7/5/17	Contig	Geogentics	SAMEA104034173	GCA_900183885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/885/GCA_900183885.1_M4528	-	-
Xanthomonas phaseoli pv. phaseoli	317013	PRJNA264816	264816	Proteobacteria	Gammaproteobacteria	5.25085	64.6	-	JSEZ02	139	4736	4226	11/10/14	4/3/17	Contig	University of Exeter	SAMN03142816	GCA_000786995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/995/GCA_000786995.2_NCPPB2064v2	26500625	NCPPB 2064
Xanthomonas phaseoli pv. phaseoli	317013	PRJNA269802	269802	Proteobacteria	Gammaproteobacteria	5.29188	64.6	-	JWTD02	144	4848	4360	12/24/14	4/3/17	Contig	University of Exeter	SAMN03257621	GCA_000807875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/875/GCA_000807875.2_NCPPB1713v2	26500625	NCPPB 1713
Staphylococcus argenteus	985002	PRJEB20633	390605	Terrabacteria group	Firmicutes	2.7712	32.2	-	FXVL01	39	2738	2581	6/15/17	7/5/17	Contig	Geogentics	SAMEA104034176	GCA_900183905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/905/GCA_900183905.1_D7903	-	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.908	56.9	-	FXRG01	113	5987	5584	4/28/17	5/6/17	Scaffold	SC	SAMEA2609488	GCA_900181565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/565/GCA_900181565.1_14936_2_29	-	3189STDY5864882
Gilliamella apicola	1196095	PRJNA323464	323464	Proteobacteria	Gammaproteobacteria	2.2696	34.9	-	LZHL01	91	2129	1966	7/21/16	7/21/16	Contig	University of Texas at Austin	SAMN05179613	GCA_001690425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/690/425/GCA_001690425.1_ASM169042v1	-	Imp1-6
Bacillus velezensis	492670	PRJNA395753	395753	Terrabacteria group	Firmicutes	4.16388	45.9	-	NOWG01	39	4196	4016	8/9/17	8/12/17	Contig	University of Neuchatel	SAMN07414470	GCA_002245385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/385/GCA_002245385.1_ASM224538v1	-	C2
Microbacterium sp. cl127	1761805	PRJEB17115	351333	Terrabacteria group	Actinobacteria	3.83445	70.5	-	FOYR01	6	3578	3472	11/1/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488591	GCA_900114965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/965/GCA_900114965.1_IMG-taxon_2639762580_annotated_assembly	-	CL127
Mesorhizobium sp. AA23	1854058	PRJNA323413	323413	Proteobacteria	Alphaproteobacteria	6.05269	63.5	-	LYTP01	33	5906	5604	6/20/16	4/12/17	Contig	Curtin University	SAMN05178588	GCA_001672435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/435/GCA_001672435.1_AA23	-	AA23
Rhizobium sp. NFR07	1566262	PRJEB17096	351698	Proteobacteria	Alphaproteobacteria	6.8752	60.8	-	FOKM01	39	6637	6374	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN03159496	GCA_900111905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/905/GCA_900111905.1_IMG-taxon_2599185236_annotated_assembly	-	NFR07
Campylobacter sp. P146	1895623	PRJNA341041	341041	Proteobacteria	delta/epsilon subdivisions	1.58322	33.6	-	MJLB01	17	1629	1546	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687061	GCA_002138975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/975/GCA_002138975.1_ASM213897v1	28854596	P146
Prochlorococcus sp. scB241_527E15	1471445	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.579043	31.5	-	JFKV01	84	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671316	GCA_000634675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/675/GCA_000634675.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Bacteroides sp. UBA1773	1946085	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.30327	48.8	-	DCGR01	102	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456557	GCA_002315285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/315/285/GCA_002315285.1_ASM231528v1	28894102	-
uncultured Ruminococcus sp.	165186	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.01782	41.8	-	FMEP01	76	2767	2716	8/16/16	8/16/16	Scaffold	SC	SAMEA3545254	GCA_900066185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/185/GCA_900066185.1_13414_6_30	-	-
Paenibacillus sp. FSL R7-0337	1926588	PRJNA343020	343020	Terrabacteria group	Firmicutes	7.63359	51.7	-	MRTX01	98	6714	6518	1/18/17	4/17/17	Contig	Cornell University	SAMN05929630	GCA_001955925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/925/GCA_001955925.1_ASM195592v1	-	FSL R7-0337
Enterococcus sp. 9D6_DIV0238	1834192	PRJNA313452	313452	Terrabacteria group	Firmicutes	3.6159	38.2	-	NIBQ01	7	3295	3148	6/6/17	6/8/17	Scaffold	Broad Institute	SAMN04634088	GCA_002174455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/455/GCA_002174455.1_ASM217445v1	-	9D6_DIV0238
Prevotella sp. CAG:1124	1262920	PRJEB691	202472	FCB group	Bacteroidetes/Chlorobi group	2.95255	48.7	-	CAYO01	301	2469	2441	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138714	GCA_000436595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/595/GCA_000436595.1_MGS1124	-	-
Mycobacterium sp. 1100029.7	1834067	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.67044	66.3	-	LZSC01	85	5323	5117	6/17/16	4/13/17	Contig	JCVI	SAMN04634185	GCA_001665235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/235/GCA_001665235.1_ASM166523v1	-	1100029.7
Streptococcus sp. HMSC067H01	1739491	PRJNA300141	300141	Terrabacteria group	Firmicutes	2.0524	39.6	-	LTUF01	56	2036	1909	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480408	GCA_001814775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/775/GCA_001814775.1_ASM181477v1	-	HMSC067H01
Bradyrhizobium sp. 17-4	1215384	PRJDB904	245946	Proteobacteria	Alphaproteobacteria	7.10637	63.9	-	BBEX01	2463	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016816	GCA_001312945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/945/GCA_001312945.1_ASM131294v1	-	JCM 18382
Arthrobacter sp. D2	1776178	PRJNA314012	314012	Terrabacteria group	Actinobacteria	4.85426	63.4	-	LUKB01	111	4550	4353	9/21/16	4/13/17	Scaffold	The University of Hong Kong	SAMN04527042	GCA_001742015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/015/GCA_001742015.1_ASM174201v1	27477918	D2
Corynebacterium sp. HMSC076D02	1739439	PRJNA300089	300089	Terrabacteria group	Actinobacteria	2.63819	59.1	-	LTVX01	78	2517	2314	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480362	GCA_001813815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/815/GCA_001813815.1_ASM181381v1	-	HMSC076D02
Staphylococcus sp. HMSC072E01	1739457	PRJNA300107	300107	Terrabacteria group	Firmicutes	2.23162	31.5	-	LTVJ01	44	2192	2091	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480377	GCA_001814125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/125/GCA_001814125.1_ASM181412v1	-	HMSC072E01
Enterobacter cloacae complex sp. 35731	1870936	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.27668	55.8	-	JZYR01	129	5227	4947	3/19/15	4/20/17	Contig	JCVI	SAMN03283650	GCA_000957195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/195/GCA_000957195.1_ASM95719v1	-	35731
Rhodococcus sp. 1139	1833762	PRJNA318142	318142	Terrabacteria group	Actinobacteria	7.0362	62.3	-	LWHK01	187	6700	6396	10/12/16	4/13/17	Scaffold	University of Tasmania	SAMN04633437	GCA_001757665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/665/GCA_001757665.1_ASM175766v1	-	1139
Sphingomonas sp. CCH16-B10	1768755	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	3.56678	66.8	-	LSIE01	115	3419	3238	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299428	GCA_001556095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/095/GCA_001556095.1_ASM155609v1	-	CCH16-B10
Acinetobacter sp. 1475718	1310652	PRJNA194728	194728	Proteobacteria	Gammaproteobacteria	4.26464	38.6	-	JEWU01	363	4303	3848	2/25/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02380517	GCA_000580955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/955/GCA_000580955.1_ASM58095v1	-	1475718
Bacillus sp. M13(2017)	1958813	PRJNA374408	374408	Terrabacteria group	Firmicutes	5.87366	34.8	-	NMQO01	51	6253	5811	7/13/17	7/17/17	Scaffold	Nanjing Tech University	SAMN06323232	GCA_002218325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/325/GCA_002218325.1_ASM221832v1	-	M13(2017)
Streptomyces sp. CNT371	1136433	PRJNA169776	169776	Terrabacteria group	Actinobacteria	8.59776	73.4	-	AZWZ01	88	7447	7109	1/3/14	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02597256	GCA_000514995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/995/GCA_000514995.1_ASM51499v1	-	CNT371
Pseudomonas sp. Root9	1736604	PRJNA297942	297942	Proteobacteria	Gammaproteobacteria	6.55448	59.7	-	LMIY01	41	6104	5799	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155873	GCA_001429205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/205/GCA_001429205.1_Root9	26633631	Root9
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.77179	66.6	-	LPDB01	76	8153	7759	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449420	GCA_001530205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/205/GCA_001530205.1_ASM153020v1	-	MSMB1063WGS
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.19334	64.1	-	FSCR01	20	5262	5057	12/14/16	3/21/17	Scaffold	SC	SAMEA2259717	GCA_900133055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/055/GCA_900133055.1_11893_6_67	-	912
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.3032	54.8	-	LPQB01	43	5264	5047	12/21/15	4/6/17	Contig	JCVI	SAMN04252907	GCA_001472275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/275/GCA_001472275.1_SMART_429.v1	-	SMART_429
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.97616	55.2	-	JZZV01	92	4967	4736	3/19/15	3/25/17	Contig	JCVI	SAMN03283632	GCA_000957805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/805/GCA_000957805.1_ASM95780v1	-	35012
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	4.26299	38.8	-	MDIN01	143	4172	3945	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022872	GCA_001706425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/425/GCA_001706425.1_ASM170642v1	-	UKK-0549
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.17643	67.5	-	LPBC01	106	6491	6156	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449365	GCA_001527185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/185/GCA_001527185.1_ASM152718v1	-	MSMB1800WGS
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.37537	63.5	-	DCRJ01	59	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455379	GCA_002325025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/025/GCA_002325025.1_ASM232502v1	28894102	-
Vibrio sp. C7	1001886	PRJDB1705	245979	Proteobacteria	Gammaproteobacteria	5.40854	45.2	-	BBMQ01	336	7514	7459	9/12/14	10/17/14	Contig	The University of Tokyo	SAMD00017305	GCA_000755365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/365/GCA_000755365.1_ASM75536v1	-	JCM 19233
Mycobacterium abscessus 5S-0421	1001729	PRJNA65187	65187	Terrabacteria group	Actinobacteria	5.24241	64	-	AKTY01	6	5355	5193	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00728602	GCA_000271225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/225/GCA_000271225.1_ASM27122v1	-	5S-0421
Cronobacter sakazakii	28141	PRJNA329459	329459	Proteobacteria	Gammaproteobacteria	4.24998	57.4	-	MBRN01	394	4109	3855	4/17/17	4/21/17	Contig	Guangdong Institute of Microbiology	SAMN05412990	GCA_002095015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/095/015/GCA_002095015.1_ASM209501v1	28057934	cro1609A1-1
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.5547	54.3	-	FKYU01	89	6408	6121	5/19/16	2/21/17	Scaffold	SC	SAMEA2273575	GCA_900083895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/895/GCA_900083895.1_12045_6_44	-	2880STDY5682490
Enterobacter cloacae subsp. cloacae	336306	PRJNA271006	271006	Proteobacteria	Gammaproteobacteria	4.85646	55	-	JZKU01	36	4676	4499	3/30/15	3/26/17	Contig	JCVI	SAMN03277197	GCA_000966095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/095/GCA_000966095.1_ASM96609v1	-	CIDEIMsCOL10
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.65816	32.6	-	CUEU01	102	2688	2545	3/31/15	3/26/17	Contig	SC	SAMEA1035074	GCA_001237065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/065/GCA_001237065.1_7067_4_83	-	CN1011
Propionibacterium acnes HL037PA1	765122	PRJNA49279	49279	Terrabacteria group	Actinobacteria	2.47642	60.1	-	ADZI01	16	2500	2372	8/5/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189211	GCA_000145555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/555/GCA_000145555.1_ASM14555v1	-	HL037PA1
Burkholderia sp. MSMB1459WGS	1637970	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.1962	66.9	-	LPMU01	89	6695	6327	1/22/16	4/11/17	Contig	Northern Arizona University	SAMN03449680	GCA_001534535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/535/GCA_001534535.1_ASM153453v1	-	MSMB1459WGS
Campylobacter coli BIGS0006	1247731	PRJNA177352	177352	Proteobacteria	delta/epsilon subdivisions	1.5421	31.9	-	ANGQ01	65	1560	1490	11/23/12	3/15/17	Contig	Swansea University	SAMN01795762	GCA_000314125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/125/GCA_000314125.1_ASM31412v1	23279096	BIGS0006
Lactobacillus plantarum	1590	PRJNA301568	301568	Terrabacteria group	Firmicutes	3.2281	44.6	-	LNCP01	14	3148	2966	11/17/15	3/27/17	Contig	CERELA-CONICET	SAMN04266587	GCA_001444495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/495/GCA_001444495.1_ASM144449v1	26966208	CRL 1506
Serratia marcescens	615	PRJNA343001	343001	Proteobacteria	Gammaproteobacteria	5.25853	58.9	-	MJAO01	65	4909	4733	12/13/16	7/3/17	Contig	Abengoa Research	SAMN05771569	GCA_001902635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/635/GCA_001902635.1_ASM190263v1	28254993	MSU97
Yersinia enterocolitica subsp. palearctica 647/5307	940288	PRJEA61337	61337	Proteobacteria	Gammaproteobacteria	4.55311	47	-	CACV01	18	4212	3871	3/24/11	5/19/17	Scaffold	Max von Pettenkofer-Institute	SAMEA2272063	GCA_000284955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/955/GCA_000284955.1_ASM28495v1	-	647/5307
Mycoplasma pneumoniae	2104	PRJNA291007	291007	Terrabacteria group	Tenericutes	0.819968	40	-	LHQI01	16	806	701	9/22/15	4/4/17	Scaffold	Centre for genomic regulation (CRG)	SAMN03897319	GCA_001296785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/785/GCA_001296785.1_ASM129678v1	26335586	Mympn_6282
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.45958	53.6	-	NDHR01	37	2393	2206	4/28/17	5/3/17	Contig	Institute for Medical Research	SAMN06311212	GCA_002115285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/285/GCA_002115285.1_ASM211528v1	-	c324
Leptospira interrogans serovar Lai str. 56601	189518	PRJNA293	293	Spirochaetes	Spirochaetia	4.69813	35.0076	chromosome I:NC_004342.2/AE010300.2; chromosome II:NC_004343.2/AE010301.2	-	2	3741	3683	10/21/02	8/3/16	Complete Genome	"Chinese National HGC, Shanghai"	SAMN02603127	GCA_000092565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/565/GCA_000092565.1_ASM9256v1	12712204	56601
Brucella melitensis UK22/04	1160214	PRJNA173603	173603	Proteobacteria	Alphaproteobacteria	3.32239	57.2	-	AQKG01	36	3403	3144	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN00811218	GCA_000370745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/745/GCA_000370745.1_Bruc_meli_UK22_04_V1	-	UK22/04
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	3.01379	46.6	-	JTHY01	92	3043	2781	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196639	GCA_001656895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/895/GCA_001656895.1_ASM165689v1	-	Lrh30
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.30061	40.3	-	LQEQ01	25	2158	2063	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366538	GCA_001929785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/785/GCA_001929785.1_ASM192978v1	-	2612PM
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.1612	41.1	-	CWAF01	72	2105	1929	6/23/15	3/26/17	Contig	SC	SAMEA1032832	GCA_001176325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/325/GCA_001176325.1_6903_3_33	-	EQUI0082
Stenotrophomonas maltophilia	40324	PRJNA326914	326914	Proteobacteria	Gammaproteobacteria	4.8007	66.1	-	MANU01	23	4436	4311	7/25/16	4/5/17	Contig	University of Liverpool	SAMN05294119	GCA_001693455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/455/GCA_001693455.1_ASM169345v1	-	SBo1
Enterococcus faecium C1904	1134814	PRJNA82017	82017	Terrabacteria group	Firmicutes	2.85542	37.7	-	AMBD01	212	2911	2769	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299489	GCA_000295315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/315/GCA_000295315.2_ASM29531v2	-	C1904
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14607	52.4	-	CQJJ01	76	2527	2194	3/22/15	4/11/17	Contig	SC	SAMEA1690358	GCA_001083105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/105/GCA_001083105.1_8727_8_53	-	GCGS149
Streptococcus mutans TCI-70	1074102	PRJNA71959	71959	Terrabacteria group	Firmicutes	1.8556	36.8	-	AGMS01	109	1870	1749	10/6/11	3/22/17	Contig	JCVI	SAMN02436362	GCA_000230065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/065/GCA_000230065.2_SMUT3-NEX_11-70	-	TCI-70
Enterococcus faecalis ERV129	1134787	PRJNA81963	81963	Terrabacteria group	Firmicutes	3.15795	37.3	-	ALZL01	81	3243	3085	8/27/12	3/23/17	Scaffold	Washington University	SAMN02299463	GCA_000294045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/045/GCA_000294045.1_ASM29404v1	-	ERV129
Clostridium botulinum C/D str. Sp77	1440058	PRJNA232296	232296	Terrabacteria group	Firmicutes	3.05731	27.9011	plasmid p2CbSp77:NZ_CM003336.1/CM003336.1; plasmid p3CbSp77:NZ_CM003337.1/CM003337.1; plasmid p4CbSp77:NZ_CM003338.1/CM003338.1	JENQ01	148	2927	2788	6/20/14	3/26/17	Contig	SVA	SAMN02593746	GCA_000724365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/365/GCA_000724365.2_BKTSp77_1.0	25254374	Sp77
Riemerella anatipestifer	34085	PRJEB6403	251923	FCB group	Bacteroidetes/Chlorobi group	2.1567	35	chromosome 1:NZ_LT906475.1/LT906475.1	-	1	2052	1984	8/15/17	8/28/17	Complete Genome	SC	SAMEA4063029	GCA_900186945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/945/GCA_900186945.1_48903_E01	-	NCTC11014
Bacillus subtilis subsp. niger	1495315	PRJNA243867	243867	Terrabacteria group	Firmicutes	4.15489	43.2	-	JMTJ01	2	4186	3986	8/22/14	3/24/17	Scaffold	Los Alamos National Laboratory	SAMN02741431	GCA_000743235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/235/GCA_000743235.1_BSV	25301645	PCI 246
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.12239	45.2	-	LRTC01	77	4997	4700	4/4/16	3/19/17	Scaffold	Health Canada	SAMN04441018	GCA_001608995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/995/GCA_001608995.1_ASM160899v1	-	A3EZ710
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.89006	38.1	-	MLLT01	256	1965	1716	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297033	GCA_001867715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/715/GCA_001867715.1_ASM186771v1	27118061	AWRIB216
Xanthomonas oryzae pv. oryzae	64187	PRJNA269452	269452	Proteobacteria	Gammaproteobacteria	4.39621	63.8	-	JXFW01	438	4438	3518	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252562	GCA_001928095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/095/GCA_001928095.1_ASM192809v1	-	IXO134
Xanthomonas citri subsp. citri	611301	PRJEB7185	265963	Proteobacteria	Gammaproteobacteria	5.24346	64.7	-	CDAV01	299	4809	4417	11/10/14	4/2/17	Contig	CIRAD	SAMEA2844845	GCA_000825245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/245/GCA_000825245.1_XACB100	-	LB100-1
Brucella abortus F1/06-B21	1169218	PRJNA173525	173525	Proteobacteria	Alphaproteobacteria	3.30356	57.2	-	AQJN01	4	3381	3126	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00839722	GCA_000370365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/365/GCA_000370365.1_Bruc_abor_F1_06-B21_V1	-	F1/06-B21
Francisella tularensis subsp. holarctica	119857	PRJNA269095	269095	Proteobacteria	Gammaproteobacteria	1.74419	32.2	-	JUJV01	241	1868	1312	12/29/14	4/21/17	Contig	the Public Health Agency of Sweden	SAMN03249218	GCA_000807905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/905/GCA_000807905.1_ASM80790v1	25700401	R13-38
Clostridioides difficile CD18	1151257	PRJNA85687	85687	Terrabacteria group	Firmicutes	3.9958	28.2	-	AVGN01	44	3661	3527	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766599	GCA_000448905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/905/GCA_000448905.2_ASM44890v2	-	CD18
Vibrio cholerae HC-52A1	991969	PRJNA63945	63945	Proteobacteria	Gammaproteobacteria	3.93754	47.7	-	ALDU01	133	3765	3463	10/4/12	3/23/17	Scaffold	Institute for Genome Sciences	SAMN00622043	GCA_000302855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/855/GCA_000302855.1_ASM30285v1	-	HC-52A1
Ralstonia solanacearum	305	PRJNA347535	347535	Proteobacteria	Betaproteobacteria	5.08362	61.4	-	MLYS01	358	-	-	12/23/16	12/23/16	Scaffold	"Shanghai Center for Plant Stress Biology,  Shanghai Institutes of Biological Sciences, CAS"	SAMN05892027	GCA_001920895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/895/GCA_001920895.1_ASM192089v1	-	FJAT-462
Bacillus thuringiensis	1428	PRJNA318318	318318	Terrabacteria group	Firmicutes	5.35677	35.1	-	LXLG01	43	5735	5408	10/12/16	4/5/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04803006	GCA_001757685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/685/GCA_001757685.1_ASM175768v1	-	GOE2
Chlamydia trachomatis D/SotonD5	1071757	PRJEA71073	71073	PVC group	Chlamydiae	1.04963	41.2643	chromosome:NC_020943.1/HE601799.1; plasmid pSotonD5:NC_020958.1/HE603230.1	-	2	975	911	3/13/12	3/23/17	Chromosome	Sanger Institute	SAMEA2272062	GCA_000318605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/605/GCA_000318605.1_ASM31860v1	22406642	D/SotonD5
Lactobacillus gasseri	1596	PRJNA387642	387642	Terrabacteria group	Firmicutes	2.12937	35	chromosome:NZ_CP021427.1/CP021427.1	-	1	2139	1946	5/30/17	6/1/17	Complete Genome	Wonkwang University	SAMN07160387	GCA_002158885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/158/885/GCA_002158885.1_ASM215888v1	-	4M13
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.56021	67	-	MURF01	154	8112	7652	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001842	GCA_001991745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/745/GCA_001991745.1_ASM199174v1	-	VC8947
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.18801	38.3	-	NGPV01	113	2161	1993	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848383	GCA_002254025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/025/GCA_002254025.1_ASM225402v1	-	105p
Bacteroides fragilis str. 1007-1-F #3	1339337	PRJNA206180	206180	FCB group	Bacteroidetes/Chlorobi group	5.695	43.2	-	JGEB01	106	5179	4842	3/20/14	4/2/17	Contig	IGS	SAMN02315074	GCA_000599265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/265/GCA_000599265.1_ASM59926v1	-	1007-1-F #3
Shigella sonnei	624	PRJNA393761	393761	Proteobacteria	Gammaproteobacteria	4.57784	50.8	-	NMXU01	510	5237	4130	8/4/17	8/6/17	Contig	Christian Medical College	SAMN07340965	GCA_002241895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/895/GCA_002241895.1_ASM224189v1	-	FC3209
Legionella pneumophila subsp. pascullei	91890	PRJNA239272	239272	Proteobacteria	Gammaproteobacteria	3.46358	38.2	-	JFIJ01	20	3134	2992	3/7/14	3/24/17	Scaffold	Beijing Institute of Microbiology and Epidemiology	SAMN02650970	GCA_000586255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/255/GCA_000586255.1_ATCC_33737	-	ATCC 33737
Vibrio vulnificus	672	PRJNA300359	300359	Proteobacteria	Gammaproteobacteria	4.96369	46.7	-	LMTD01	99	4734	4328	12/7/16	4/6/17	Scaffold	Exeter University	SAMN04219563	GCA_001890625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/625/GCA_001890625.1_106-2A	-	106-2A
Pseudomonas syringae CC457	1357285	PRJNA211412	211412	Proteobacteria	Gammaproteobacteria	5.84269	59.1	-	AVEB02	356	5226	4963	8/20/13	3/24/17	Contig	University of Arizona	SAMN02471568	GCA_000452585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/585/GCA_000452585.2_CC457_092313_2.0	24459267	CC457
Streptococcus suis YS14	1214188	PRJNA171450	171450	Terrabacteria group	Firmicutes	2.17152	41	-	ALMC01	45	2182	2026	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469540	GCA_000440995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/995/GCA_000440995.1_version1	-	YS14
Streptococcus agalactiae GB00013	1154894	PRJNA86461	86461	Terrabacteria group	Firmicutes	2.05771	35.3	-	ALSO01	18	2120	2010	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991162	GCA_000288095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/095/GCA_000288095.1_ASM28809v1	-	GB00013
Riemerella anatipestifer	34085	PRJNA285936	285936	FCB group	Bacteroidetes/Chlorobi group	2.42524	35	chromosome:NZ_CP011859.1/CP011859.1	-	1	2367	2238	3/13/17	3/15/17	Complete Genome	the Chinese Academy of Agricultural Sciences (CAAS)	SAMN03761967	GCA_002025185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/185/GCA_002025185.1_ASM202518v1	-	HXb2
Leptospira interrogans serovar Hardjo str. Norma	1279460	PRJNA185511	185511	Spirochaetes	Spirochaetia	4.76215	35	chromosome I:NZ_CP012603.1/CP012603.1; chromosome II:NZ_CP012604.1/CP012604.1	-	2	4322	3893	9/17/15	4/10/17	Complete Genome	Federal University of Minas Gerais	SAMN03853357	GCA_001293065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/065/GCA_001293065.1_ASM129306v1	26543126	Norma
Bifidobacterium longum	216816	PRJEB18553	373869	Terrabacteria group	Actinobacteria	2.07288	60.5	-	FTRS01	681	1831	1619	2/8/17	4/6/17	Contig	University of Tromso	SAMEA51823918	GCA_900157165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/165/GCA_900157165.1_Bifido_12_v1	-	-
Shigella flexneri	623	PRJNA315925	315925	Proteobacteria	Gammaproteobacteria	4.6734	50.7	-	LVIK01	414	5378	4341	5/20/16	8/11/17	Contig	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04570178	GCA_001649265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/265/GCA_001649265.1_ASM164926v1	-	GX4s01
Bacillus anthracis	1392	PRJNA264742	264742	Terrabacteria group	Firmicutes	5.44926	35.1	-	JSZX01	36	6060	5703	12/4/14	3/25/17	Scaffold	Georgia Institute of Technology	SAMN03165122	GCA_000793545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/545/GCA_000793545.1_ASM79354v1	-	2000032832
Riemerella anatipestifer Yb2	1455062	PRJNA236054	236054	FCB group	Bacteroidetes/Chlorobi group	2.18407	35	chromosome:NZ_CP007204.1/CP007204.1	-	1	2091	2021	7/14/15	4/3/17	Complete Genome	"Shanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences"	SAMN03768359	GCA_001077795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/795/GCA_001077795.1_ASM107779v1	26002892	Yb2
Leptospira interrogans serovar Manilae str. K56	1291363	PRJNA189022	189022	Spirochaetes	Spirochaetia	4.66946	35	-	AOUU01	137	4239	3807	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01919801	GCA_000342945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/945/GCA_000342945.1_CA_glsol184	-	K56
Streptococcus pyogenes ABC020044010	1439127	PRJNA233273	233273	Terrabacteria group	Firmicutes	1.81801	38.6	-	JJFL01	4	1855	1734	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567622	GCA_000629845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/845/GCA_000629845.1_Stre_pyog_ABC020044010_V1	-	ABC020044010
Riemerella anatipestifer	34085	PRJNA239758	239758	FCB group	Bacteroidetes/Chlorobi group	2.16028	35	chromosome:NZ_CP007504.1/CP007504.1	-	1	2045	1801	7/9/15	4/3/17	Complete Genome	Nanjing Agriculture University	SAMN02704887	GCA_001051115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/115/GCA_001051115.1_ASM105111v1	-	153
Riemerella anatipestifer	34085	PRJNA239758	239758	FCB group	Bacteroidetes/Chlorobi group	2.15252	35	chromosome:CP007503.1	-	1	2080	1810	7/9/15	7/9/15	Complete Genome	Nanjing Agriculture University	SAMN02704884	GCA_001051075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/075/GCA_001051075.1_ASM105107v1	-	17
Streptococcus pneumoniae	1313	PRJNA229402	229402	Terrabacteria group	Firmicutes	2.15052	39.7	-	JFIZ01	98	2323	2019	10/2/14	3/10/17	Scaffold	Harvard Medical School / Massachusetts Eye and Ear Infirmary	SAMN02641378	GCA_000762645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/645/GCA_000762645.1_Sp_3502.v1.0	-	ECC_3502
Leptospira interrogans serovar Bratislava	338215	PRJNA269972	269972	Spirochaetes	Spirochaetia	4.72158	35	chromosome I:NZ_CP011410.1/CP011410.1; chromosome II:NZ_CP011411.1/CP011411.1	-	2	4226	3832	5/20/15	4/10/17	Complete Genome	"USDA, ARS, National Animal Disease Center"	SAMN03259167	GCA_001010765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/765/GCA_001010765.1_ASM101076v1	26112787	PigK151
Mycobacterium tuberculosis 1821ADB42	1334082	PRJNA203194	203194	Terrabacteria group	Actinobacteria	4.41153	65.5	chromosome:NZ_CP009204.1/CP009204.1	-	1	4282	4049	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837656	GCA_001997605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/605/GCA_001997605.1_ASM199760v1	27261264	1821ADB42
Haemophilus influenzae	727	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.84453	38	-	JWEL01	73	1817	1708	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197023	GCA_001052725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/725/GCA_001052725.1_ASM105272v1	26230489	1059_HINF
Mycobacterium bovis BCG str. Moreau	1195466	PRJNA167550	167550	Terrabacteria group	Actinobacteria	4.15655	65.4	-	AKYS01	540	-	-	8/30/13	1/8/14	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control, China"	SAMN02470645	GCA_000463215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/215/GCA_000463215.1_BCG_Moreau	23977002	Moreau
Mycobacterium avium subsp. paratuberculosis	1770	PRJNA290494	290494	Terrabacteria group	Actinobacteria	4.77736	69.3	-	LGRY01	98	4528	4278	10/27/16	4/5/17	Contig	Memorial University of Newfoundland	SAMN03892587	GCA_001855355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/355/GCA_001855355.1_ASM185535v1	-	NL 89C
Lactococcus lactis subsp. lactis	1360	PRJNA294255	294255	Terrabacteria group	Firmicutes	2.74392	35.1	-	LKLW01	169	2789	2537	12/4/15	4/4/17	Contig	Radboudumc	SAMN04026653	GCA_001456835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/835/GCA_001456835.1_ASM145683v1	-	N42
Bacillus cereus AH1134	405533	PRJNA17719	17719	Terrabacteria group	Firmicutes	5.90875	34.9	-	ABDA02	37	6248	5775	6/26/07	5/18/17	Scaffold	TIGR	SAMN02436322	GCA_000181615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/181/615/GCA_000181615.1_ASM18161v1	-	AH1134
Staphylococcus epidermidis MC19	1344996	PRJNA207990	207990	Terrabacteria group	Firmicutes	2.56434	31.8	-	ATCY02	219	2517	2358	7/2/13	3/24/17	Contig	Max-Planck-Institute for Evolutionary Biology	SAMN02470516	GCA_000418205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/205/GCA_000418205.2_MC19_v2	24435862	MC19
Thermoanaerobacter kivui	2325	PRJNA257042	257042	Terrabacteria group	Firmicutes	2.39782	35	chromosome:NZ_CP009170.1/CP009170.1	-	1	2476	2173	10/6/14	4/17/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02947172	GCA_000763575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/575/GCA_000763575.1_ASM76357v1	25523312	DSM 2030; LKT-1
Yersinia pestis subsp. microtus bv. Altaica	385967	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.64607	47.5	-	MIEE01	167	4439	4117	1/26/17	3/29/17	Scaffold	SRCAMB	SAMN05521429	GCA_001972475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/475/GCA_001972475.1_ASM197247v1	-	SCPM-O-DNA-04
Pseudomonas fluorescens ICMP 11288	1198309	PRJNA296725	296725	Proteobacteria	Gammaproteobacteria	6.52316	60.2	-	LKEF01	106	5989	5767	12/15/15	4/5/17	Contig	New Zealand Institute for Plant & Food research	SAMN04102813	GCA_001466835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/835/GCA_001466835.1_ASM146683v1	27056212	ICMP 11288
Lactococcus lactis	1358	PRJNA260691	260691	Terrabacteria group	Firmicutes	2.39809	35	chromosome:NZ_CP009472.1/CP009472.1	-	1	2343	2162	10/1/14	4/2/17	Complete Genome	Universidade de Sao Paulo	SAMN03025289	GCA_000761115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/115/GCA_000761115.1_ASM76111v1	25414513	AI06
Riemerella anatipestifer RA-CH-2	1271752	PRJNA183917	183917	FCB group	Bacteroidetes/Chlorobi group	2.16632	35	chromosome:NC_020125.1/CP004020.1	-	1	2050	1969	1/14/13	3/31/17	Complete Genome	"Avian Disease Research Center, Sichuan Agricultural University"	SAMN02602992	GCA_000331695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/695/GCA_000331695.1_ASM33169v1	24935762	RA-CH-2
Riemerella anatipestifer ATCC 11845 = DSM 15868	693978	PRJNA63599	63599	FCB group	Bacteroidetes/Chlorobi group	2.16409	35	chromosome:NC_017045.1/CP003388.1	-	1	2062	1993	3/15/12	3/30/17	Complete Genome	"Avian Disease Centre of the College of Veterinary Medicine, Sichuan Agricultural University"	SAMN02602991	GCA_000252855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/855/GCA_000252855.1_ASM25285v1	22628503	ATCC 11845
Thermoanaerobacterium xylanolyticum LX-11	858215	PRJNA50295	50295	Terrabacteria group	Firmicutes	2.53436	35	chromosome:NC_015555.1/CP002739.1	-	1	2459	2325	5/17/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00204087	GCA_000189775.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/775/GCA_000189775.3_ASM18977v3	-	LX-11
Riemerella anatipestifer RA-GD	992406	PRJNA49039	49039	FCB group	Bacteroidetes/Chlorobi group	2.16638	35	chromosome:NC_017569.1/CP002562.1	-	1	2063	1895	3/7/11	3/30/17	Complete Genome	"Beijing Institute of Genomics, Chinese Academy of Sciences"	SAMN02603017	GCA_000191565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/565/GCA_000191565.1_ASM19156v1	21441509	RA-GD
Riemerella anatipestifer ATCC 11845 = DSM 15868	693978	PRJNA41989	41989	FCB group	Bacteroidetes/Chlorobi group	2.15512	35	chromosome:NC_014738.1/CP002346.1	-	1	2050	1982	11/23/10	3/30/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00138930	GCA_000183155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/155/GCA_000183155.1_ASM18315v1	21677851	DSM 15868
Pseudomonas fluorescens	294	PRJNA301338	301338	Proteobacteria	Gammaproteobacteria	6.68165	60.7	-	LNAB02	68	5901	5695	12/17/15	4/5/17	Contig	Embrapa	SAMN04244127	GCA_001468775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/775/GCA_001468775.2_ASM146877v2	-	et76
Yersinia pestis subsp. microtus bv. Talassica	385968	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.67314	47.6	-	MIEC01	190	4485	4138	1/26/17	3/29/17	Scaffold	SRCAMB	SAMN05521425	GCA_001972505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/505/GCA_001972505.1_ASM197250v1	-	SCPM-O-B-4664
Sulfolobus islandicus M.16.4	426118	PRJNA18807	18807	TACK group	Crenarchaeota	2.58665	35	chromosome:NC_012726.1/CP001402.1	-	1	2779	2678	5/27/09	10/31/15	Complete Genome	US DOE Joint Genome Institute	SAMN02598414	GCA_000022445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/445/GCA_000022445.1_ASM2244v1	19435847	M.16.4
Staphylococcus epidermidis E13A	1115805	PRJNA156777	156777	Terrabacteria group	Firmicutes	2.40884	32	-	AURC01	56	2399	2284	8/5/13	3/24/17	Contig	JCVI	SAMN02436406	GCA_000443975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/975/GCA_000443975.1_StaphepE13Av01	-	E13A
Bacillus cereus LCT-BC244	1163722	PRJNA91115	91115	Terrabacteria group	Firmicutes	5.15688	35.5	-	AJGQ01	7	5496	5239	3/26/12	5/18/17	Scaffold	BGI	SAMN02469355	GCA_000256545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/545/GCA_000256545.1_ASM25654v1	22689237	LCT-BC244
Lactococcus lactis subsp. lactis	1360	PRJNA294255	294255	Terrabacteria group	Firmicutes	2.49842	35	-	LKLY01	213	2565	2359	12/4/15	4/4/17	Contig	Radboudumc	SAMN04026655	GCA_001456855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/855/GCA_001456855.1_ASM145685v1	-	UC317
Mycobacterium avium subsp. paratuberculosis	1770	PRJNA290494	290494	Terrabacteria group	Actinobacteria	4.76849	69.3	-	LGRZ01	90	4525	4281	10/27/16	4/5/17	Contig	Memorial University of Newfoundland	SAMN03892589	GCA_001855365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/365/GCA_001855365.1_ASM185536v1	-	NL 93B
Haemophilus influenzae	727	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.85924	38	-	JWCH01	63	1840	1736	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197079	GCA_001053885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/885/GCA_001053885.1_ASM105388v1	26230489	1124_HINF
Mycobacterium tuberculosis 1821ADB44	1334083	PRJNA203195	203195	Terrabacteria group	Actinobacteria	4.41153	65.5	chromosome:NZ_CP009205.1/CP009205.1	-	1	4260	4064	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837657	GCA_001997625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/625/GCA_001997625.1_ASM199762v1	27261264	1821ADB44
Sulfolobus islandicus M.16.27	427318	PRJNA18873	18873	TACK group	Crenarchaeota	2.6924	35	chromosome:NC_012632.1/CP001401.1	-	1	2921	2729	4/29/09	3/30/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598417	GCA_000022425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/425/GCA_000022425.1_ASM2242v1	19435847	M.16.27
Streptococcus pneumoniae	1313	PRJNA229402	229402	Terrabacteria group	Firmicutes	2.02732	39.6	-	JFJI01	53	2194	1991	10/2/14	3/10/17	Scaffold	Harvard Medical School / Massachusetts Eye and Ear Infirmary	SAMN02641379	GCA_000762665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/665/GCA_000762665.1_Sp_3511.v1.0	-	SC_3511
Candidatus Amoebophilus asiaticus 5a2	452471	PRJNA19981	19981	FCB group	Bacteroidetes/Chlorobi group	1.88436	35	chromosome:NC_010830.1/CP001102.1	-	1	1453	1242	6/9/08	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000287	GCA_000020565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/565/GCA_000020565.1_ASM2056v1	20023027	5a2
Fervidobacterium nodosum Rt17-B1	381764	PRJNA16719	16719	Thermotogae	Thermotogae	1.94894	35	chromosome:NC_009718.1/CP000771.1	-	1	1839	1755	7/30/07	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN00623043	GCA_000017545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/545/GCA_000017545.1_ASM1754v1	19307556	Rt17-B1
Streptococcus pyogenes ABC020035427	1439090	PRJNA233259	233259	Terrabacteria group	Firmicutes	1.81549	38.4	-	JJFM01	6	1846	1734	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567608	GCA_000629865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/865/GCA_000629865.1_Stre_pyog_ABC020035427_V1	-	ABC020035427
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2841	1291335	PRJNA189002	189002	Spirochaetes	Spirochaetia	4.61041	35	-	AOVO01	148	4113	3751	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920630	GCA_000342965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/965/GCA_000342965.1_CA_glsol128	-	Fiocruz LV2841
Pseudomonas putida S11	1218169	PRJNA171810	171810	Proteobacteria	Gammaproteobacteria	5.97075	62.4	-	ALXA01	196	3675	3599	8/23/12	1/8/14	Contig	Madurai Kamaraj University	SAMN02470288	GCA_000292775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/775/GCA_000292775.1_PPS11_1.0	23045515	S11
Bacillus anthracis	1392	PRJNA264742	264742	Terrabacteria group	Firmicutes	5.45053	35.1	-	JSZZ01	42	6081	5668	12/4/14	3/25/17	Scaffold	Georgia Institute of Technology	SAMN03165124	GCA_000793565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/565/GCA_000793565.1_ASM79356v1	-	2000032892
Shigella flexneri	623	PRJNA315925	315925	Proteobacteria	Gammaproteobacteria	4.40534	50.8	-	LVIL01	429	4988	4100	5/20/16	2/25/17	Contig	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04570179	GCA_001649275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/275/GCA_001649275.1_ASM164927v1	-	GX4s02
Bifidobacterium longum	216816	PRJEB18553	373869	Terrabacteria group	Actinobacteria	2.78899	59.8	-	FTRR01	69	2653	2405	2/8/17	4/6/17	Contig	University of Tromso	SAMEA51826168	GCA_900157185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/185/GCA_900157185.1_PC4_v1	-	-
Prochlorococcus marinus str. NATL1A	167555	PRJNA15660	15660	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.86473	35	chromosome:NC_008819.1/CP000553.1	-	1	2034	1976	1/22/07	3/30/17	Complete Genome	Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02603287	GCA_000015685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/685/GCA_000015685.1_ASM1568v1	-	NATL1A
Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130	267671	PRJNA10687	10687	Spirochaetes	Spirochaetia	4.62737	35	chromosome I:NC_005823.1/AE016823.1; chromosome II:NC_005824.1/AE016824.1	-	2	4092	3753	3/22/04	5/19/17	Complete Genome	Sao Paulo state (Brazil) Consortium	SAMN02603847	GCA_000007685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/685/GCA_000007685.1_ASM768v1	15028702	Fiocruz L1-130
Streptococcus agalactiae GB00018	1154895	PRJNA86463	86463	Terrabacteria group	Firmicutes	1.97685	35.2	-	ALSP01	19	2033	1912	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991160	GCA_000288115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/115/GCA_000288115.1_ASM28811v1	-	GB00018
Streptococcus suis YS16	1214189	PRJNA171451	171451	Terrabacteria group	Firmicutes	2.32931	41	-	ALMD01	63	2320	2176	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469509	GCA_000441015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/015/GCA_000441015.1_version1	-	YS16
Pseudomonas syringae CC440	1357284	PRJNA211409	211409	Proteobacteria	Gammaproteobacteria	5.72512	59.1	-	AVEC02	354	5130	4863	8/20/13	3/24/17	Contig	University of Arizona	SAMN02471571	GCA_000452605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/605/GCA_000452605.2_CC440_0923_2.0	24459267	CC440
Vibrio vulnificus	672	PRJNA300360	300360	Proteobacteria	Gammaproteobacteria	4.97586	46.7	-	LMTC01	84	4828	4414	12/7/16	4/6/17	Scaffold	Exeter University	SAMN04219564	GCA_001890645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/645/GCA_001890645.1_ASM189064v1	-	S3-16
Legionella pneumophila subsp. fraseri	91892	PRJNA239272	239272	Proteobacteria	Gammaproteobacteria	3.4564	38.2	-	JFIK01	42	3139	2984	3/7/14	3/24/17	Scaffold	Beijing Institute of Microbiology and Epidemiology	SAMN02650969	GCA_000586275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/275/GCA_000586275.1_ATCC_33216	-	ATCC 33216
Shigella sonnei	624	PRJNA393761	393761	Proteobacteria	Gammaproteobacteria	4.64893	50.8	-	NMXR01	495	5338	4211	8/4/17	8/6/17	Contig	Christian Medical College	SAMN07340969	GCA_002242015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/015/GCA_002242015.1_ASM224201v1	-	FC15
Bacteroides fragilis str. 1009-4-F #7	1339296	PRJNA206139	206139	FCB group	Bacteroidetes/Chlorobi group	5.9804	43.1	-	JGEE01	46	5249	4955	3/20/14	4/4/17	Contig	IGS	SAMN02314434	GCA_000599285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/285/GCA_000599285.2_ASM59928v2	-	1009-4-F #7
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.24619	38.6	-	NGPT01	144	2301	2073	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848385	GCA_002254035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/035/GCA_002254035.1_ASM225403v1	-	107e
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.84193	67.1	-	MUQZ01	207	7523	7022	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001836	GCA_001991755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/755/GCA_001991755.1_ASM199175v1	-	VC15049
Leptospira interrogans serovar Manilae	214675	PRJNA287300	287300	Spirochaetes	Spirochaetia	4.6674	34.9848	chromosome 1:NZ_CP011931.1/CP011931.1; chromosome 2:NZ_CP011932.1/CP011932.1; plasmid pLIMLP1:NZ_CP011933.1/CP011933.1	-	3	4203	3800	7/8/15	4/10/17	Complete Genome	Okinawa Institute of Advanced Sciences	SAMN03780437	GCA_001047635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/635/GCA_001047635.1_ASM104763v1	26272567	UP-MMC-NIID LP
Chlamydia trachomatis D/SotonD6	1071758	PRJEA71075	71075	PVC group	Chlamydiae	1.05005	41.2643	chromosome:NC_020968.1/HE601800.1; plasmid pSotonD6:NC_020959.1/HE603231.1	-	2	974	909	3/13/12	3/23/17	Chromosome	Sanger Institute	SAMEA2272565	GCA_000318625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/625/GCA_000318625.1_ASM31862v1	22406642	D/SotonD6
Bacillus thuringiensis	1428	PRJNA318325	318325	Terrabacteria group	Firmicutes	5.3475	35.1	-	LXLH01	60	5714	5386	10/12/16	4/5/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04817213	GCA_001757695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/695/GCA_001757695.1_ASM175769v1	-	GOE3
Ralstonia solanacearum	305	PRJNA347535	347535	Proteobacteria	Betaproteobacteria	5.33443	62.3	-	MLYU01	309	-	-	12/23/16	12/23/16	Scaffold	"Shanghai Center for Plant Stress Biology,  Shanghai Institutes of Biological Sciences, CAS"	SAMN05892026	GCA_001920905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/905/GCA_001920905.1_ASM192090v1	-	FJAT-452
Vibrio cholerae HC-55A1	991970	PRJNA63947	63947	Proteobacteria	Gammaproteobacteria	3.93213	47.7	-	ALDV01	129	3754	3459	10/4/12	3/23/17	Scaffold	Institute for Genome Sciences	SAMN00622044	GCA_000302875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/875/GCA_000302875.1_ASM30287v1	-	HC-55A1
Clostridioides difficile CD38	1151261	PRJNA85695	85695	Terrabacteria group	Firmicutes	4.04678	28.4	-	AVGR01	122	3801	3589	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766612	GCA_000448925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/925/GCA_000448925.2_ASM44892v2	-	CD38
Francisella tularensis subsp. holarctica	119857	PRJNA240114	240114	Proteobacteria	Gammaproteobacteria	1.90716	32.2	-	JUJU01	2	1959	1568	2/9/15	4/3/17	Contig	Los Alamos National Laboratory	SAMN03252734	GCA_000833715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/715/GCA_000833715.1_FTT_3	25931589	JAP
Brucella abortus F10/05-11	1169219	PRJNA173502	173502	Proteobacteria	Alphaproteobacteria	3.29282	57.2	-	AQJO01	4	3388	3149	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00839699	GCA_000370385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/385/GCA_000370385.1_Bruc_abor_F10_05-11_V1	-	F10/05-11
Xanthomonas citri subsp. citri	611301	PRJEB7186	265964	Proteobacteria	Gammaproteobacteria	5.1846	64.8	-	CDMR01	320	4749	4352	1/13/15	4/2/17	Contig	CIRAD	SAMEA2844844	GCA_000825265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/265/GCA_000825265.1_XACJK4	-	JK4-1
Xanthomonas oryzae pv. oryzae	64187	PRJNA269454	269454	Proteobacteria	Gammaproteobacteria	4.36318	63.8	-	JXFY01	474	4361	3449	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252582	GCA_001928105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/105/GCA_001928105.1_ASM192810v1	-	IXO151
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.96913	38.1	-	MLLU01	232	2057	1817	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297034	GCA_001867735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/735/GCA_001867735.1_ASM186773v1	27118061	AWRIB217
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.15897	45.3	-	LRSY01	37	4983	4734	4/4/16	3/19/17	Scaffold	Health Canada	SAMN04441014	GCA_001609055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/055/GCA_001609055.1_ASM160905v1	-	A0EZ383
Bacillus subtilis	1423	PRJNA266797	266797	Terrabacteria group	Firmicutes	4.31547	43.3	-	JXHQ01	152	4683	4350	2/2/15	3/25/17	Scaffold	TIFN	SAMN03174424	GCA_000830735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/735/GCA_000830735.1_ASM83073v1	26988043	B4145
Leptospira interrogans serovar Manilae	214675	PRJNA287301	287301	Spirochaetes	Spirochaetia	4.66735	34.9848	chromosome 1:NZ_CP011934.1/CP011934.1; chromosome 2:NZ_CP011935.1/CP011935.1; plasmid pLIMHP1:NZ_CP011936.1/CP011936.1	-	3	4205	3793	7/8/15	4/10/17	Complete Genome	Okinawa Institute of Advanced Sciences	SAMN03780438	GCA_001047655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/655/GCA_001047655.1_ASM104765v1	26272567	UP-MMC-NIID HP
Clostridium botulinum C/D str. It1	1443126	PRJNA233472	233472	Terrabacteria group	Firmicutes	2.49971	28.5944	plasmid p3CbIt1:NZ_CM003329.1/CM003329.1; plasmid p4CbIt1:NZ_CM003330.1/CM003330.1	JENO01	77	2435	2279	6/20/14	3/26/17	Contig	National Veterinary Institute (SVA)	SAMN02593753	GCA_000724385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/385/GCA_000724385.2_It1_0.1	25254374	It1
Enterococcus faecalis ERV25	1134788	PRJNA81965	81965	Terrabacteria group	Firmicutes	3.08736	37.3	-	ALZM01	93	3178	3020	8/27/12	3/27/17	Scaffold	Washington University	SAMN02299464	GCA_000294065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/065/GCA_000294065.2_ASM29406v2	-	ERV25
Streptococcus mutans TCI-75	1074104	PRJNA71961	71961	Terrabacteria group	Firmicutes	1.87948	36.8	-	AGMT01	108	1889	1788	10/6/11	3/22/17	Contig	JCVI	SAMN02436363	GCA_000230085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/085/GCA_000230085.2_SMUT3-NEX_21-75	-	TCI-75
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14652	52.4	-	CQMM01	80	2505	2175	3/22/15	4/11/17	Contig	SC	SAMEA1690378	GCA_001083545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/545/GCA_001083545.1_8727_8_23	-	GCGS119
Enterococcus faecium 505	1134806	PRJNA81999	81999	Terrabacteria group	Firmicutes	2.61986	38.3	-	AMBL01	71	2574	2448	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299481	GCA_000295335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/335/GCA_000295335.2_ASM29533v2	-	505
Stenotrophomonas maltophilia	40324	PRJNA329467	329467	Proteobacteria	Gammaproteobacteria	4.99267	65.9	-	MJAS01	79	4627	4488	11/1/16	4/5/17	Contig	University of Malaya	SAMN05413110	GCA_001858265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/265/GCA_001858265.1_ASM185826v1	-	R5G
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.1444	41.2	-	CWBI01	84	2089	1915	6/23/15	3/26/17	Contig	SC	SAMEA1032834	GCA_001176365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/365/GCA_001176365.1_6903_4_64	-	EQUI0113
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.30263	40.3	-	LQFE01	30	2158	2061	1/4/17	4/10/17	Scaffold	"University of California, Davis"	SAMN04366552	GCA_001929855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/855/GCA_001929855.1_ASM192985v1	-	2930PM
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.82486	46.7	-	JTHZ01	322	3009	2547	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196636	GCA_001656915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/915/GCA_001656915.1_ASM165691v1	-	Lrh3
Brucella melitensis UK23/06	1160213	PRJNA173602	173602	Proteobacteria	Alphaproteobacteria	3.29591	57.2	-	AQKH01	6	3374	3141	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN00811220	GCA_000370765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/765/GCA_000370765.1_Bruc_meli_UK23_06_V1	-	UK23/06
Bacillus bombysepticus str. Wang	1330043	PRJNA242213	242213	Terrabacteria group	Firmicutes	5.87359	34.9754	chromosome:NZ_CP007512.1/CP007512.1; plasmid pBb:NZ_CP007513.1/CP007513.1	-	2	6140	5732	4/17/14	4/17/17	Complete Genome	State Key Laboratory of Silkworm Genome Biology	SAMN02691825	GCA_000831065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/065/GCA_000831065.1_ASM83106v1	24831136	Wang
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.52915	53.6	-	NDHU01	40	2464	2279	4/28/17	5/3/17	Contig	Institute for Medical Research	SAMN06311208	GCA_002115305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/305/GCA_002115305.1_ASM211530v1	-	c111
Mycoplasma pneumoniae	2104	PRJNA291007	291007	Terrabacteria group	Tenericutes	0.82018	40	-	LHQK01	14	796	673	9/22/15	4/10/17	Scaffold	Centre for genomic regulation (CRG)	SAMN03897321	GCA_001296805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/805/GCA_001296805.1_ASM129680v1	26335586	Mympn_M547
Yersinia enterocolitica subsp. palearctica YO527	940289	PRJEA61339	61339	Proteobacteria	Gammaproteobacteria	4.65899	47	-	CACW01	20	4399	3962	3/24/11	5/19/17	Scaffold	Max von Pettenkofer-Institute	SAMEA2272449	GCA_000284975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/975/GCA_000284975.1_ASM28497v1	-	YO527
Serratia marcescens subsp. marcescens	211759	PRJNA354941	354941	Proteobacteria	Gammaproteobacteria	5.14978	60	-	MQRJ01	101	4880	4655	12/19/16	3/28/17	Contig	Institute of Experimental Medicine	SAMN06054350	GCA_001908015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/015/GCA_001908015.1_ASM190801v1	-	189
Lactobacillus plantarum	1590	PRJNA284435	284435	Terrabacteria group	Firmicutes	3.29866	44.4	-	LDEL01	27	3234	3070	1/25/16	3/27/17	Contig	Geneva University Hospitals	SAMN03702584	GCA_001540925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/925/GCA_001540925.1_ASM154092v1	26713450	Lp1610
Campylobacter coli BIGS0007	1247732	PRJNA177352	177352	Proteobacteria	delta/epsilon subdivisions	1.52154	32	-	ANGR01	197	1580	1480	11/23/12	3/15/17	Contig	Swansea University	SAMN01795763	GCA_000314145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/145/GCA_000314145.1_ASM31414v1	23279096	BIGS0007
Burkholderia sp. BDU18	1385588	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.15954	67.3	-	LNJQ01	4	6772	6201	2/2/16	4/11/17	Contig	Northern Arizona University	SAMN03449223	GCA_001546915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/915/GCA_001546915.1_ASM154691v1	-	BDU18
Propionibacterium acnes HL013PA1	765069	PRJNA49169	49169	Terrabacteria group	Actinobacteria	2.47808	60	-	ADZH01	12	2493	2371	8/5/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189199	GCA_000145575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/575/GCA_000145575.1_ASM14557v1	-	HL013PA1
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.51393	32.6	-	CUHM01	102	2492	2375	3/31/15	3/26/17	Contig	SC	SAMEA1035139	GCA_001237105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/105/GCA_001237105.1_7068_7_7	-	7532
Enterobacter cloacae	550	PRJNA265015	265015	Proteobacteria	Gammaproteobacteria	4.724	54.7	-	JSWZ01	41	4609	4411	5/14/15	3/26/17	Contig	University of Malaya	SAMN03145046	GCA_001006635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/635/GCA_001006635.1_ASM100663v1	-	CH1
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.14272	54.9	-	FKZX01	69	6051	5747	5/19/16	2/25/17	Scaffold	SC	SAMEA2273520	GCA_900083905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/905/GCA_900083905.1_12045_5_88	-	2880STDY5682435
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.46976	56.8	-	NCTQ01	40	4340	4133	4/20/17	4/22/17	Contig	FDA/CFSAN	SAMN06697624	GCA_002101415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/415/GCA_002101415.1_ASM210141v1	-	MOD1_GK799
Mycobacterium abscessus 4S-0726-RA	1001726	PRJNA65181	65181	Terrabacteria group	Actinobacteria	4.84221	64.2	-	AKTV01	6	4849	4738	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00728582	GCA_000271245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/245/GCA_000271245.1_ASM27124v1	-	4S-0726-RA
Vibrio sp. JCM 19236	1481926	PRJDB1708	245982	Proteobacteria	Gammaproteobacteria	4.84154	46.1	-	BBSB01	84	6689	6631	1/22/15	3/24/15	Contig	The University of Tokyo	SAMD00017308	GCA_000830455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/455/GCA_000830455.1_ASM83045v1	-	JCM19236
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.05287	63.7	-	DCSI01	292	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453300	GCA_002325525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/525/GCA_002325525.1_ASM232552v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.24784	66.9	-	LOYV01	143	7564	7082	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449305	GCA_001527225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/225/GCA_001527225.1_ASM152722v1	-	MSMB2047
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	4.06814	38.7	-	MDIA01	101	3998	3795	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022843	GCA_001706435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/435/GCA_001706435.1_ASM170643v1	-	St-12275-92
Citrobacter freundii str. ballerup 7851/39	670484	PRJEA50369	50369	Proteobacteria	Gammaproteobacteria	4.90464	52.3	-	CACD01	357	4919	4588	7/9/10	5/18/17	Scaffold	Wellcome Trust Sanger Institute	SAMEA2272125	GCA_000208765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/208/765/GCA_000208765.1_ASM20876v1	19897651	Ballerup 7851
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.85936	55.4	-	JZZU01	59	4750	4543	3/19/15	3/25/17	Contig	JCVI	SAMN03283622	GCA_000957825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/825/GCA_000957825.1_ASM95782v1	-	35013
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.98016	55.2	-	LPPU01	44	4919	4701	12/21/15	4/6/17	Contig	JCVI	SAMN04252914	GCA_001472415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/415/GCA_001472415.1_SMART_543.v1	-	SMART_543
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.22628	64.1	-	FVGT01	20	5296	5081	3/10/17	3/18/17	Scaffold	SC	SAMEA2259725	GCA_900133105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/105/GCA_900133105.1_11893_6_71	-	920
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.60952	66.6	-	LPFW01	88	7982	7602	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449496	GCA_001530415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/415/GCA_001530415.1_ASM153041v1	-	MSMB1513WGS
Pseudomonas sp. EGD-AKN5	1524461	PRJNA325143	325143	Proteobacteria	Gammaproteobacteria	7.09085	67	-	LZYC01	89	6314	6097	6/18/16	4/13/17	Scaffold	National Environmental Engineering Research Institute	SAMN05223263	GCA_001669755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/755/GCA_001669755.1_ASM166975v1	-	EGD-AKN5
Streptomyces sp. CNR698	1206101	PRJNA169773	169773	Terrabacteria group	Actinobacteria	7.49655	72.5	-	AZXC01	72	6468	6137	1/3/14	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02597259	GCA_000515055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/055/GCA_000515055.1_ASM51505v1	-	CNR698
Bacillus sp. FJAT-45347	2011011	PRJNA390025	390025	Terrabacteria group	Firmicutes	4.51796	40.8	-	NISR01	3	-	-	9/19/17	9/19/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN07212122	GCA_002352765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/765/GCA_002352765.2_ASM235276v2	-	FJAT-45347
Acinetobacter sp. 869535	1310621	PRJNA194697	194697	Proteobacteria	Gammaproteobacteria	3.24351	41.7	-	JEXH01	259	3110	2859	2/25/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02380530	GCA_000581035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/035/GCA_000581035.1_ASM58103v1	-	869535
Sphingomonas sp. CCH10-B3	1768757	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	3.63679	65.1	-	LSIJ01	108	3623	3474	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299434	GCA_001556185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/185/GCA_001556185.1_ASM155618v1	-	CCH10-B3
Clostridium sp. DSM 8431	1761781	PRJEB17600	351963	Terrabacteria group	Firmicutes	3.63075	28.9	-	FPBY01	330	3434	3082	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487886	GCA_900116755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/755/GCA_900116755.1_IMG-taxon_2623621014_annotated_assembly	-	DSM 8431
Rhodococcus sp. 66b	1945511	PRJNA369727	369727	Terrabacteria group	Actinobacteria	6.68396	62.4	-	MUZB01	57	6248	6075	3/31/17	4/6/17	Scaffold	CSIRO	SAMN06293076	GCA_002076325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/325/GCA_002076325.1_ASM207632v1	-	66b
Enterobacter cloacae complex sp. 43444	1870935	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.7504	55.9	-	JZYC01	58	4592	4378	3/19/15	4/20/17	Contig	JCVI	SAMN03283645	GCA_000957315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/315/GCA_000957315.1_ASM95731v1	-	43444
Staphylococcus sp. HMSC055B03	1739460	PRJNA300110	300110	Terrabacteria group	Firmicutes	2.47782	31.8	-	LWQF01	112	2427	2328	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480385	GCA_001814155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/155/GCA_001814155.1_ASM181415v1	-	HMSC055B03
Corynebacterium sp. HMSC072D12	1739447	PRJNA300097	300097	Terrabacteria group	Actinobacteria	2.56638	60.7	-	LTVS01	45	2419	2312	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480368	GCA_001813925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/925/GCA_001813925.1_ASM181392v1	-	HMSC072D12
Arthrobacter sp. UCD-GKA	1913576	PRJNA350703	350703	Terrabacteria group	Actinobacteria	4.92459	65.8	-	MOLR01	32	4471	4321	11/2/16	4/13/17	Scaffold	UC Davis	SAMN05945145	GCA_001863355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/355/GCA_001863355.1_ASM186335v1	-	UCD-GKA
Bradyrhizobium sp. PARBB1	2015559	PRJNA340070	340070	Proteobacteria	Alphaproteobacteria	7.72292	64.5	-	NKIX01	206	7292	7024	8/16/17	8/16/17	Scaffold	CNRS-AMU	SAMN07280670	GCA_002256335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/335/GCA_002256335.1_ASM225633v1	-	-
Streptococcus sp. HMSC072D07	1739495	PRJNA300145	300145	Terrabacteria group	Firmicutes	2.13064	40.9	-	LTUB01	59	2103	1986	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480412	GCA_001814835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/835/GCA_001814835.1_ASM181483v1	-	HMSC072D07
Mycobacterium sp. 1482268.1	1834080	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.31403	65.8	-	LZSH01	587	5425	4768	6/17/16	4/12/17	Contig	JCVI	SAMN04634200	GCA_001665255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/255/GCA_001665255.1_ASM166525v1	-	1482268.1
Prevotella sp. CAG:1185	1262921	PRJEB697	206682	FCB group	Bacteroidetes/Chlorobi group	3.14946	43.7	-	CAYW01	162	2599	2562	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138719	GCA_000436695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/695/GCA_000436695.1_MGS1185	-	-
Enterococcus sp. 8E11_MSG4843	1834190	PRJNA313452	313452	Terrabacteria group	Firmicutes	3.99324	43.1	-	NIBP01	9	3688	3493	6/6/17	6/8/17	Scaffold	Broad Institute	SAMN04634084	GCA_002174495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/495/GCA_002174495.1_ASM217449v1	-	8E11_MSG4843
Paenibacillus sp. FSL H7-0331	1920421	PRJNA343020	343020	Terrabacteria group	Firmicutes	9.46806	45.5	-	MRTH01	171	8427	8089	1/18/17	4/17/17	Contig	Cornell University	SAMN05929610	GCA_001956045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/045/GCA_001956045.1_ASM195604v1	-	FSL H7-0331
uncultured Ruminococcus sp.	165186	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.7569	47	-	FMDU01	14	2653	2604	8/16/16	8/16/16	Scaffold	SC	SAMEA3545263	GCA_900066225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/225/GCA_900066225.1_13414_6_39	-	-
Bacteroides sp. UBA1451	1946084	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.38201	44.8	-	DCTB01	205	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451557	GCA_002329165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/165/GCA_002329165.1_ASM232916v1	28894102	-
Prochlorococcus sp. scB241_527L15	1471448	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.19053	31.5	-	JFKY01	299	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671319	GCA_000634695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/695/GCA_000634695.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. P148	1895624	PRJNA341042	341042	Proteobacteria	delta/epsilon subdivisions	1.61198	33.6	-	MJLC01	17	1674	1597	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687062	GCA_002138995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/995/GCA_002138995.1_ASM213899v1	28854596	P148
Rhizobium sp. RU33A	1907413	PRJEB18851	360729	Proteobacteria	Alphaproteobacteria	4.84948	61	-	FTMQ01	25	4608	4499	1/14/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05880561	GCA_900156055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/055/GCA_900156055.1_IMG-taxon_2708742397_annotated_assembly	-	RU33A
Mesorhizobium sp. WSM3873	1854056	PRJNA323414	323414	Proteobacteria	Alphaproteobacteria	6.27029	63.3	-	LYTM01	57	6093	5742	6/20/16	4/13/17	Contig	Curtin University	SAMN05178610	GCA_001672445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/445/GCA_001672445.1_WSM3873	-	WSM3873
Microbacterium sp. AO20a11	1201038	PRJNA169005	169005	Terrabacteria group	Actinobacteria	3.12798	69.1	-	AMCB01	2500	-	-	6/10/13	1/8/14	Contig	University of Georgia	SAMN02471782	GCA_000409605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/605/GCA_000409605.1_AO20a11	-	AO20a11
Bacillus velezensis	492670	PRJNA343056	343056	Terrabacteria group	Firmicutes	4.01776	46.3	-	MLCW01	57	4007	3851	8/25/17	8/28/17	Contig	Universidad Autonoma de Zacatecas	SAMN05846289	GCA_002269705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/705/GCA_002269705.1_ASM226970v1	-	3A-25B
Gilliamella apicola	1196095	PRJNA331189	331189	Proteobacteria	Gammaproteobacteria	2.70917	34.3	-	MCIU01	85	-	-	9/13/16	9/13/16	Contig	University of Texas at Austin	SAMN05439824	GCA_001723875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/875/GCA_001723875.1_ASM172387v1	-	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.90633	56.9	-	FXQO01	114	5998	5618	4/28/17	5/6/17	Scaffold	SC	SAMEA2609494	GCA_900181645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/645/GCA_900181645.1_14936_2_32	-	3189STDY5864885
Staphylococcus argenteus	985002	PRJEB20633	390605	Terrabacteria group	Firmicutes	2.78794	32.3	-	FXVN01	22	2755	2594	6/15/17	7/5/17	Contig	Geogentics	SAMEA104034177	GCA_900183915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/915/GCA_900183915.1_M5219	-	-
Xanthomonas phaseoli pv. phaseoli	317013	PRJNA269801	269801	Proteobacteria	Gammaproteobacteria	5.22631	64.5	-	JWTE02	143	4727	4207	12/26/14	4/3/17	Contig	University of Exeter	SAMN03257620	GCA_000808655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/655/GCA_000808655.2_NCPPB557v2	26500625	NCPPB 557
Xanthomonas phaseoli pv. phaseoli	317013	PRJNA269946	269946	Proteobacteria	Gammaproteobacteria	5.20296	64.7	-	JWTF02	170	4736	4180	12/26/14	4/11/17	Contig	University of Exeter	SAMN03257682	GCA_000808675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/675/GCA_000808675.2_NCPPB1811v2	26500625	NCPPB 1811
Staphylococcus argenteus	985002	PRJEB20633	390605	Terrabacteria group	Firmicutes	2.79102	32.3	-	FXWC01	33	2759	2592	6/15/17	7/5/17	Contig	Geogentics	SAMEA104034179	GCA_900183935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/935/GCA_900183935.1_M5224	-	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.79989	57	-	FXQP01	109	5861	5505	4/28/17	5/6/17	Scaffold	SC	SAMEA2609502	GCA_900181695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/695/GCA_900181695.1_14936_2_37	-	3189STDY5864890
Gilliamella apicola	1196095	PRJNA331189	331189	Proteobacteria	Gammaproteobacteria	7.423	34.6	-	MCIV01	2779	-	-	9/14/16	9/14/16	Contig	University of Texas at Austin	SAMN05439825	GCA_001726005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/005/GCA_001726005.1_ASM172600v1	-	-
Bacillus velezensis	492670	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.01814	46.4	-	NPDH01	101	3954	3801	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372739	GCA_002271355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/355/GCA_002271355.1_assembly-7899_v1	-	7899
Microbacterium sp. SUBG005	1504156	PRJNA248942	248942	Terrabacteria group	Actinobacteria	7.01076	64.8	-	JNNT01	6170	5481	4630	6/30/14	12/2/15	Contig	SaurashtraUniversity	SAMN02808195	GCA_000724685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/685/GCA_000724685.2_ASM72468v2	26484276	SUBG005
Mesorhizobium sp. UASWS1009	1566387	PRJNA268581	268581	Proteobacteria	Alphaproteobacteria	6.30326	63	-	MDEO01	41	6002	5872	8/15/16	4/13/17	Contig	University of Applied Sciences of Western Switzerland hepia	SAMN03219998	GCA_001705425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/425/GCA_001705425.1_ASM170542v1	-	UASWS1009
Rhizobium sp. RU36D	1907415	PRJEB20345	382091	Proteobacteria	Alphaproteobacteria	6.07627	61.4	-	FWXU01	77	5834	5661	4/8/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05880593	GCA_900176345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/345/GCA_900176345.1_IMG-taxon_2716884867_annotated_assembly	-	RU36D
Campylobacter sp. P157	1895626	PRJNA341044	341044	Proteobacteria	delta/epsilon subdivisions	1.63814	33.6	-	MJLE01	23	1676	1596	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687064	GCA_002139015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/015/GCA_002139015.1_ASM213901v1	28854596	P157
Prochlorococcus sp. scB241_528K19	1471455	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.44809	31.3	-	JFLF01	337	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671326	GCA_000634715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/715/GCA_000634715.1_De_novo_assembly_of_single-cell_genomes	24763590	-
uncultured Ruminococcus sp.	165186	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.41606	37.6	-	FMHB01	11	2252	2203	8/16/16	8/16/16	Scaffold	SC	SAMEA3545267	GCA_900066255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/255/GCA_900066255.1_13414_6_43	-	-
Paenibacillus sp. FSL H8-0548	1920422	PRJNA343020	343020	Terrabacteria group	Firmicutes	7.23087	45.5	-	MRTK01	181	6117	5947	1/18/17	4/17/17	Contig	Cornell University	SAMN05929616	GCA_001956095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/095/GCA_001956095.1_ASM195609v1	-	FSL H8-0548
Enterococcus sp. kppr-6	1761783	PRJEB17064	351144	Terrabacteria group	Firmicutes	4.44864	39.9	-	FOHR01	68	4438	4195	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487821	GCA_900111415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/415/GCA_900111415.1_IMG-taxon_2606217798_annotated_assembly	-	KPPR-6
Prevotella sp. CAG:1092	1262919	PRJEB689	202470	FCB group	Bacteroidetes/Chlorobi group	3.09505	42.4	-	CAZL01	294	2563	2513	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138730	GCA_000436915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/915/GCA_000436915.1_MGS1092	-	-
Mycobacterium sp. 1554424.7	1834082	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.14456	68.1	-	LZSE01	141	5897	5631	6/17/16	4/12/17	Contig	JCVI	SAMN04634179	GCA_001665295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/295/GCA_001665295.1_ASM166529v1	-	1554424.7
Streptococcus sp. HMSC065E03	1739505	PRJNA300155	300155	Terrabacteria group	Firmicutes	2.17071	41.9	-	LTTR01	29	2110	2004	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480422	GCA_001815045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/045/GCA_001815045.1_ASM181504v1	-	HMSC065E03
Bradyrhizobium sp. 35-63-5	1970326	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	0.515174	63.2	-	NCEZ01	285	638	606	8/16/17	8/16/17	Scaffold	None	SAMN06622333	GCA_002280915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/915/GCA_002280915.1_ASM228091v1	-	-
Arthrobacter sp. KBS0703	1955698	PRJNA373913	373913	Terrabacteria group	Actinobacteria	4.72526	66.2	-	MVDG01	96	4375	4044	2/28/17	3/2/17	Scaffold	Indiana University	SAMN06318587	GCA_002008315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/008/315/GCA_002008315.1_ASM200831v1	-	KBS0703
Corynebacterium sp. HMSC070B05	1739464	PRJNA300114	300114	Terrabacteria group	Actinobacteria	2.41706	59	-	LTVE01	46	2120	2034	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480383	GCA_001814235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/235/GCA_001814235.1_ASM181423v1	-	HMSC070B05
Staphylococcus sp. HMSC072D04	1739470	PRJNA300120	300120	Terrabacteria group	Firmicutes	2.4841	32.7	-	LTUZ01	98	2430	2335	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480391	GCA_001814365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/365/GCA_001814365.1_ASM181436v1	-	HMSC072D04
Enterobacter cloacae complex sp. 20432	1870933	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.13898	55.7	-	LABD01	79	5075	4841	3/19/15	4/20/17	Contig	JCVI	SAMN03283306	GCA_000957415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/415/GCA_000957415.1_ASM95741v1	-	20432
Rhodococcus sp. 06-621-2	2022500	PRJNA395383	395383	Terrabacteria group	Actinobacteria	6.23289	64.5	-	NOYA01	67	5881	5703	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376370	GCA_002258205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/205/GCA_002258205.1_ASM225820v1	-	06-621-2
Clostridium sp. USBA 49	1881060	PRJEB19591	376336	Terrabacteria group	Firmicutes	2.67658	27.6	-	FUYD01	31	2494	2371	3/4/17	3/10/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05428976	GCA_900167505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/505/GCA_900167505.1_IMG-taxon_2671180031_annotated_assembly	-	USBA 49
Sphingomonas sp. CCH20-B6	1768769	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	4.05859	66.6	-	LSJC01	219	3979	3735	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299453	GCA_001556565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/565/GCA_001556565.1_ASM155656v1	-	CCH20-B6
Acinetobacter sp. 1295259	1310608	PRJNA194684	194684	Proteobacteria	Gammaproteobacteria	4.11959	38.7	-	JEWG01	103	4071	3730	2/25/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02380503	GCA_000581095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/095/GCA_000581095.1_ASM58109v1	-	1295259
Bacillus sp. BO	1476855	PRJEB5947	242462	Terrabacteria group	Firmicutes	4.63203	39.6	-	FYEQ01	1	4737	4562	7/7/17	8/28/17	Scaffold	URMITE	SAMEA104136810	GCA_900188535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/535/GCA_900188535.1_PRJEB5947	-	BO
Streptomyces sp. Tu 6176	1470557	PRJNA239680	239680	Terrabacteria group	Actinobacteria	8.82007	71.2	-	JFJQ01	20	7675	6233	3/31/14	3/9/17	Scaffold	Universidad de Oviedo	SAMN02666786	GCA_000611795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/795/GCA_000611795.1_Tu61761.0	-	Tu 6176
Pseudomonas sp. HMSC11A05	1581085	PRJNA269854	269854	Proteobacteria	Gammaproteobacteria	6.32296	66.5	-	LUAB01	137	6040	5764	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03287023	GCA_001807925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/925/GCA_001807925.1_ASM180792v1	-	HMSC11A05
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.30349	66.9	-	LPFU01	73	7695	7378	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449494	GCA_001530665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/665/GCA_001530665.1_ASM153066v1	-	MSMB1510WGS
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.19643	64.1	-	FVHY01	8	5259	5053	3/10/17	3/18/17	Scaffold	SC	SAMEA2275655	GCA_900133625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/625/GCA_900133625.1_12163_1_11	-	933
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.56082	54.9	-	LPPE01	76	5504	5237	12/21/15	4/6/17	Contig	JCVI	SAMN04252930	GCA_001472725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/725/GCA_001472725.1_SMART_773.v1	-	SMART_773
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.95211	55.2	-	JZZS01	80	4902	4658	3/19/15	3/25/17	Contig	JCVI	SAMN03283641	GCA_000957835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/835/GCA_000957835.1_ASM95783v1	-	35019
Citrobacter freundii	546	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.09453	51.7	-	JVDD01	127	5104	4817	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197733	GCA_001055295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/295/GCA_001055295.1_ASM105529v1	26230489	537_CKOS
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	4.21106	38.9	-	MDIO01	262	4078	3845	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022873	GCA_001706445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/445/GCA_001706445.1_ASM170644v1	-	UKK-0550
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.86228	67.2	-	LOYY01	114	7216	6817	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449308	GCA_001527245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/245/GCA_001527245.1_ASM152724v1	-	MSMB2050
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.87398	64	-	DCSK01	298	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454084	GCA_002325585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/585/GCA_002325585.1_ASM232558v1	28894102	-
Vibrio sp. JCM 19061	1481931	PRJDB1713	252076	Proteobacteria	Gammaproteobacteria	5.07978	44.5	-	BAXU01	118	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000392	GCA_001310695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/695/GCA_001310695.1_ASM131069v1	-	JCM 19061
Mycobacterium abscessus 4S-0726-RB	1001727	PRJNA65183	65183	Terrabacteria group	Actinobacteria	4.86229	64.2	-	AKTW01	6	4846	4735	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00728583	GCA_000271265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/265/GCA_000271265.1_ASM27126v1	-	4S-0726-RB
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.52896	56.7	-	NCTO01	54	4401	4191	4/20/17	4/22/17	Contig	FDA/CFSAN	SAMN06697622	GCA_002101505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/505/GCA_002101505.1_ASM210150v1	-	MOD1_GK1262
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.40963	55.4	-	FKZY01	79	6256	5924	5/19/16	2/21/17	Scaffold	SC	SAMEA2273674	GCA_900083915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/915/GCA_900083915.1_11983_8_30	-	2880STDY5682598
Enterobacter cloacae	550	PRJNA265013	265013	Proteobacteria	Gammaproteobacteria	5.19478	54.9	-	JSWY01	68	5040	4826	5/14/15	3/26/17	Contig	University of Malaya	SAMN03145044	GCA_001006645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/645/GCA_001006645.1_ASM100664v1	-	B2
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.54045	32.7	-	CUGF01	77	2513	2398	3/31/15	3/26/17	Contig	SC	SAMEA1035116	GCA_001237425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/425/GCA_001237425.1_7068_7_4	-	6682
Propionibacterium acnes HL087PA2	765082	PRJNA49197	49197	Terrabacteria group	Actinobacteria	2.47444	60	-	ADYX01	16	2498	2376	7/30/10	3/30/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189244	GCA_000147145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/145/GCA_000147145.1_ASM14714v1	-	HL087PA2
Burkholderia sp. BDU19	1385589	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.85883	67.5	-	LNJR01	4	6484	5913	2/2/16	4/12/17	Contig	Northern Arizona University	SAMN03449224	GCA_001546955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/955/GCA_001546955.1_ASM154695v1	-	BDU19
Campylobacter coli BIGS0009	1247734	PRJNA177352	177352	Proteobacteria	delta/epsilon subdivisions	1.50002	32.1	-	ANGT01	217	1556	1442	11/23/12	3/15/17	Contig	Swansea University	SAMN01795765	GCA_000314185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/185/GCA_000314185.1_ASM31418v1	23279096	BIGS0009
Lactobacillus plantarum	1590	PRJNA284436	284436	Terrabacteria group	Firmicutes	3.24052	44.4	-	LDEM01	25	3162	2979	1/25/16	3/27/17	Contig	Geneva University Hospitals	SAMN03702585	GCA_001540965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/965/GCA_001540965.1_ASM154096v1	26713450	Lp1612
Serratia marcescens subsp. marcescens	211759	PRJNA354941	354941	Proteobacteria	Gammaproteobacteria	5.03043	60.1	-	MQRI01	28	4725	4485	12/19/16	3/28/17	Contig	Institute of Experimental Medicine	SAMN06054327	GCA_001908035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/035/GCA_001908035.1_ASM190803v1	-	99
Yersinia enterocolitica	630	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	4.54338	47.2	-	CQCV01	81	4277	4029	3/23/15	3/26/17	Scaffold	SC	SAMEA1486425	GCA_001084885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/885/GCA_001084885.1_8016_2_75	-	WA
Mycoplasma pneumoniae	2104	PRJNA291007	291007	Terrabacteria group	Tenericutes	0.82044	40	-	LHPT01	15	803	697	9/22/15	4/4/17	Scaffold	Centre for genomic regulation (CRG)	SAMN03897304	GCA_001296815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/815/GCA_001296815.1_ASM129681v1	26335586	Mympn_3912
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.43628	53.6	-	NDHP01	35	2353	2173	4/28/17	5/3/17	Contig	Institute for Medical Research	SAMN06311215	GCA_002115325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/325/GCA_002115325.1_ASM211532v1	-	rz553
Bacillus thuringiensis	1428	PRJNA288953	288953	Terrabacteria group	Firmicutes	6.40346	34.9753	chromosome:NZ_CP012099.1/CP012099.1; plasmid pHS18-1:NZ_CP012100.1/CP012100.1; plasmid pHS18-2:NZ_CP012101.1/CP012101.1; plasmid pHS18-3:NZ_CP012102.1/CP012102.1; plasmid pHS18-4:NZ_CP012103.1/CP012103.1; plasmid pHS18-5:NZ_CP012104.1/CP012104.1; plasmid pHS18-6:NZ_CP012105.1/CP012105.1; plasmid pHS18-7:NZ_CP012106.1/CP012106.1; plasmid pHS18-8:NZ_CP012107.1/CP012107.1; plasmid pHS18-9:NZ_CP012108.1/CP012108.1	-	10	6729	6170	7/20/15	4/3/17	Complete Genome	Sichuan Agricultural University	SAMN03840349	GCA_001182785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/785/GCA_001182785.1_ASM118278v1	-	HS18-1
Brucella melitensis Uk24/06	1160222	PRJNA173590	173590	Proteobacteria	Alphaproteobacteria	3.29504	57.2	-	AQKI01	7	3377	3142	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN00811221	GCA_000370785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/785/GCA_000370785.1_Bruc_meli_Uk24_06_V1	-	Uk24/06
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	3.00494	46.6	-	JTIB01	97	3065	2810	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196643	GCA_001656925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/925/GCA_001656925.1_ASM165692v1	-	Lrh28
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.30006	40.3	-	LQCZ01	27	2157	2061	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366495	GCA_001929905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/905/GCA_001929905.1_ASM192990v1	-	2125PM
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15777	41.2	-	CVZH01	92	2106	1911	6/23/15	3/26/17	Contig	SC	SAMEA1032835	GCA_001176385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/385/GCA_001176385.1_6830_4_84	-	EQUI0229
Stenotrophomonas maltophilia	40324	PRJNA348790	348790	Proteobacteria	Gammaproteobacteria	4.52695	66.5	-	MLJK01	64	4074	3973	11/3/16	11/4/16	Contig	China University of Geosciences	SAMN05915699	GCA_001866065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/065/GCA_001866065.1_ASM186606v1	-	DT1
Enterococcus faecium ERV102	1134820	PRJNA82029	82029	Terrabacteria group	Firmicutes	2.90591	37.7	-	AMAX01	212	2955	2811	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299495	GCA_000295355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/355/GCA_000295355.2_ASM29535v2	-	ERV102
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14733	52.5	-	CQLY01	81	2506	2177	3/23/15	4/10/17	Contig	SC	SAMEA1690366	GCA_001083925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/925/GCA_001083925.1_8289_2_40	-	GCGS040
Streptococcus mutans TCI-78	1074105	PRJNA71963	71963	Terrabacteria group	Firmicutes	1.88309	36.8	-	AGMU01	110	1904	1791	10/6/11	3/22/17	Contig	JCVI	SAMN02436596	GCA_000230105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/105/GCA_000230105.2_SMUT3-NEX_25-78	-	TCI-78
Enterococcus faecalis ERV31	1134789	PRJNA81967	81967	Terrabacteria group	Firmicutes	3.05317	37.3	-	ALZN01	83	3121	2980	8/27/12	3/27/17	Scaffold	Washington University	SAMN02299465	GCA_000294085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/085/GCA_000294085.2_ASM29408v2	-	ERV31
Clostridium botulinum	1491	PRJNA239370	239370	Terrabacteria group	Firmicutes	3.90114	28.2	-	JFGI01	389	3785	3195	7/18/14	3/24/17	Contig	Centers for Disease Control and Prevention	SAMN02664947	GCA_000730705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/705/GCA_000730705.1_ASM73070v1	25031122	CDC37461
Cyanobacterium aponinum PCC 10605	755178	PRJNA158691	158691	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.17697	34.9729	chromosome:NC_019776.1/CP003947.1; plasmid pCYAN10605.01:NC_019777.1/CP003948.1	-	2	3559	3426	12/7/12	4/17/17	Complete Genome	JGI	SAMN02261329	GCA_000317675.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/675/GCA_000317675.1_ASM31767v1	-	PCC 10605
Bacillus subtilis	1423	PRJNA375962	375962	Terrabacteria group	Firmicutes	4.13481	44	-	MVPW01	98	4170	3873	5/19/17	6/15/17	Scaffold	Sichuan University	SAMN06368306	GCA_002153395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/395/GCA_002153395.1_ASM215339v1	-	PT-9
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.14784	45.2	-	LRTB01	41	4954	4705	4/4/16	3/19/17	Scaffold	Health Canada	SAMN04441017	GCA_001609105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/105/GCA_001609105.1_ASM160910v1	-	A3EZ634
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.98691	37.6	-	MLLV01	185	2009	1813	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297035	GCA_001867765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/765/GCA_001867765.1_ASM186776v1	27118061	AWRIB240
Xanthomonas oryzae pv. oryzae	64187	PRJNA269455	269455	Proteobacteria	Gammaproteobacteria	4.28242	63.9	-	JXFZ01	426	4301	3454	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252580	GCA_001928135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/135/GCA_001928135.1_ASM192813v1	-	IXO159
Xanthomonas citri subsp. citri	611301	PRJEB7187	265965	Proteobacteria	Gammaproteobacteria	5.18355	64.7	-	CDAY01	337	4742	4317	11/10/14	4/2/17	Contig	CIRAD	SAMEA2827563	GCA_000825285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/285/GCA_000825285.1_XACG115	-	LG115
Brucella abortus F10/06-3	1169220	PRJNA173512	173512	Proteobacteria	Alphaproteobacteria	3.28684	57.2	-	AQJP01	5	3373	3135	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00839709	GCA_000370405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/405/GCA_000370405.1_Bruc_abor_F10_06-3_V1	-	F10/06-3
Francisella tularensis	263	PRJNA253522	253522	Proteobacteria	Gammaproteobacteria	1.8625	32.3	-	JPMJ01	95	2008	1561	2/25/16	4/4/17	Contig	Swedish Defence Research Agency	SAMN02870478	GCA_001574495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/495/GCA_001574495.1_ASM157449v1	-	NO-4/2011
Clostridioides difficile CD39	1151262	PRJNA85697	85697	Terrabacteria group	Firmicutes	3.98937	28.3	-	AVGS01	172	3755	3519	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766613	GCA_000448945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/945/GCA_000448945.2_ASM44894v2	-	CD39
Vibrio cholerae HC-56A1	991973	PRJNA63953	63953	Proteobacteria	Gammaproteobacteria	3.93417	47.8	-	ALDW01	123	3733	3484	10/4/12	3/23/17	Scaffold	Institute for Genome Sciences	SAMN00622040	GCA_000302895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/895/GCA_000302895.1_ASM30289v1	-	HC-56A1
Ralstonia solanacearum K60-1	1091042	PRJEA73571	73571	Proteobacteria	Betaproteobacteria	3.67558	66.3	-	CAGT01	347	3530	3481	2/20/12	2/20/12	Contig	MicroScope	SAMEA2272760	GCA_000285815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/815/GCA_000285815.1_ASM28581v1	-	K60
Bacillus thuringiensis	1428	PRJNA318329	318329	Terrabacteria group	Firmicutes	6.00838	34.8	-	LXLI01	63	6372	5959	10/12/16	4/5/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04819576	GCA_001757745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/745/GCA_001757745.1_ASM175774v1	-	GOE4
Chlamydia trachomatis E/SotonE4	1071760	PRJEA71081	71081	PVC group	Chlamydiae	1.05013	41.2643	chromosome:NC_020969.1/HE601802.1; plasmid pSotonE4:NC_020987.1/HE603232.1	-	2	974	908	3/13/12	3/23/17	Chromosome	Sanger Institute	SAMEA2272732	GCA_000318665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/665/GCA_000318665.1_ASM31866v1	22406642	E/SotonE4
Bacillus thuringiensis serovar indiana	180850	PRJNA263441	263441	Terrabacteria group	Firmicutes	6.19845	34.9666	chromosome:NZ_CP010106.1/CP010106.1; plasmid pBTHD521-1:NZ_CP010107.1/CP010107.1; plasmid pBTHD521-2:NZ_CP010108.1/CP010108.1; plasmid pBTHD521-3:NZ_CP010109.1/CP010109.1; plasmid pBTHD521-4:NZ_CP010110.1/CP010110.1; plasmid pBTHD521-5:NZ_CP010111.1/CP010111.1; plasmid pBTHD521-6:NZ_CP010112.1/CP010112.1	-	7	6509	6112	7/21/15	4/3/17	Complete Genome	Rice Research Institution of SICAU	SAMN03121810	GCA_001183785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/785/GCA_001183785.1_ASM118378v1	26380647	HD521
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.07179	67	-	MURJ01	146	7664	7202	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001847	GCA_001991795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/795/GCA_001991795.1_ASM199179v1	-	VC11575
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.16482	38.5	-	NGPW01	144	2124	1917	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848382	GCA_002254045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/045/GCA_002254045.1_ASM225404v1	-	105o
Bacteroides fragilis str. S23L24	1339330	PRJNA206173	206173	FCB group	Bacteroidetes/Chlorobi group	5.32212	43.3	-	JGEL01	122	4826	4495	3/20/14	4/18/17	Contig	IGS	SAMN02315068	GCA_000599305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/305/GCA_000599305.1_ASM59930v1	-	S23L24
Shigella sonnei	624	PRJNA393761	393761	Proteobacteria	Gammaproteobacteria	4.52123	50.8	-	NMYA01	500	5066	4044	8/4/17	8/6/17	Contig	Christian Medical College	SAMN07340959	GCA_002242045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/045/GCA_002242045.1_ASM224204v1	-	FC1244
Legionella pneumophila subsp. pneumophila ATCC 33215	933085	PRJNA239272	239272	Proteobacteria	Gammaproteobacteria	3.37471	38.2	-	JFIL01	52	3095	2973	3/7/14	3/24/17	Scaffold	Beijing Institute of Microbiology and Epidemiology	SAMN02650968	GCA_000586295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/295/GCA_000586295.1_ATCC_33215	-	ATCC 33215
Vibrio vulnificus	672	PRJNA277736	277736	Proteobacteria	Gammaproteobacteria	8.44654	50.1	-	LAVU01	1696	-	-	3/29/17	3/29/17	Contig	University of Valencia	SAMN03395192	GCA_002074885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/885/GCA_002074885.1_ASM207488v1	25435180	12
Pseudomonas syringae CC1630	1357283	PRJNA211408	211408	Proteobacteria	Gammaproteobacteria	6.05606	58.5	-	AVED02	283	5697	5394	8/20/13	3/24/17	Contig	University of Arizona	SAMN02471552	GCA_000452625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/625/GCA_000452625.2_CC1630_092313_2.0	24459267	CC1630
Streptococcus suis YS17	1214190	PRJNA171452	171452	Terrabacteria group	Firmicutes	2.33768	41	-	ALME01	67	2326	2170	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469556	GCA_000441035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/035/GCA_000441035.1_version1	-	YS17
Streptococcus agalactiae GB00012	1154893	PRJNA86459	86459	Terrabacteria group	Firmicutes	2.11656	35.3	-	ALSN01	20	2164	2050	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991159	GCA_000288135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/135/GCA_000288135.1_ASM28813v1	-	GB00012
Acinetobacter baumannii PKAB07	1413216	PRJNA224967	224967	Proteobacteria	Gammaproteobacteria	4.24261	39.2898	chromosome:NZ_CP006963.1/CP006963.1; plasmid pPKAB07:NZ_CP006964.1/CP006964.1	-	2	3955	3725	2/24/14	3/16/17	Chromosome	Pondicherry University	SAMN03081512	GCA_000576535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/535/GCA_000576535.1_ASM57653v1	24652977	AB07
Bacillus thuringiensis serovar galleriae	29338	PRJNA261635	261635	Terrabacteria group	Firmicutes	6.74223	34.9557	chromosome:NZ_CP010089.1/CP010089.1; plasmid pBMB12:NZ_CP010097.1/CP010097.1; plasmid pBMB126:NZ_CP010092.1/CP010092.1; plasmid pBMB267:NZ_CP010091.1/CP010091.1; plasmid pBMB426:NZ_CP010090.1/CP010090.1; plasmid pBMB47:NZ_CP010095.1/CP010095.1; plasmid pBMB55:NZ_CP010094.1/CP010094.1; plasmid pBMB7:NZ_CP010098.1/CP010098.1; plasmid pBMB71:NZ_CP010093.1/CP010093.1; plasmid pBMB8:NZ_CP010099.1/CP010099.1; plasmid pBMBLin15:NZ_CP010096.1/CP010096.1	-	11	7111	6557	12/18/14	4/2/17	Complete Genome	HUAZHONG AGRICULTURAL UNIVERSITY	SAMN03074947	GCA_000803665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/665/GCA_000803665.1_ASM80366v1	-	HD-29
Bifidobacterium longum	216816	PRJEB18553	373869	Terrabacteria group	Actinobacteria	2.33429	60.1	-	FTRQ01	97	2024	1844	2/8/17	4/6/17	Contig	University of Tromso	SAMEA51816418	GCA_900157195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/195/GCA_900157195.1_Bifido_02_v1	-	-
Shigella flexneri	623	PRJNA315925	315925	Proteobacteria	Gammaproteobacteria	4.46685	50.7	-	LVIM01	398	5140	4171	5/20/16	3/5/17	Contig	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04570180	GCA_001649295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/295/GCA_001649295.1_ASM164929v1	-	GX4s03
Bacillus anthracis	1392	PRJNA348802	348802	Terrabacteria group	Firmicutes	5.35159	35.1	-	MLJX01	32	5966	5637	10/24/16	3/28/17	Scaffold	NCDC Lugar Center	SAMN05915713	GCA_001835485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/485/GCA_001835485.1_ASM183548v1	-	55-VNIIVViM
Pseudomonas putida SJ3	1388760	PRJNA215701	215701	Proteobacteria	Gammaproteobacteria	5.59677	61.6	-	AXDX02	279	5266	4293	10/22/13	7/30/15	Contig	Kyungpook national university	SAMN02470222	GCA_000478865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/865/GCA_000478865.2_ASM47886v2	26205864	SJ3
Leptospira interrogans serovar Copenhageni str. 2006006982	1291316	PRJNA188967	188967	Spirochaetes	Spirochaetia	4.6436	35	-	AOWW01	174	4158	3750	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920564	GCA_000342985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/985/GCA_000342985.1_CA_glsol037	-	2006006982
Streptococcus pyogenes ABC020032183	1439071	PRJNA233256	233256	Terrabacteria group	Firmicutes	1.78627	38.5	-	JJFN01	4	1796	1679	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567605	GCA_000629885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/885/GCA_000629885.1_Stre_pyog_ABC020032183_V1	-	ABC020032183
Bacillus thuringiensis	1428	PRJNA383629	383629	Terrabacteria group	Firmicutes	6.31628	34.9407	chromosome:NZ_CP021061.1/CP021061.1; plasmid poh1:NZ_CP021062.1/CP021062.1; plasmid poh2:NZ_CP021063.1/CP021063.1; plasmid poh3:NZ_CP021064.1/CP021064.1; plasmid poh4:NZ_CP021065.1/CP021065.1; plasmid poh5:NZ_CP021066.1/CP021066.1	-	6	6682	6275	5/9/17	6/15/17	Complete Genome	Kangwon National University	SAMN06844127	GCA_002119445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/445/GCA_002119445.1_ASM211944v1	-	ATCC 10792
Bacillus thuringiensis serovar kurstaki str. YBT-1520	570416	PRJNA242813	242813	Terrabacteria group	Firmicutes	6.52041	34.9377	chromosome:NZ_CP007607.1/CP007607.1; plasmid pBMB11:NZ_CP007612.1/CP007612.1; plasmid pBMB2062:NZ_CP007608.1/CP007608.1; plasmid pBMB293:NZ_CP007615.1/CP007615.1; plasmid pBMB400:NZ_CP007616.1/CP007616.1; plasmid pBMB69:NZ_CP007613.1/CP007613.1; plasmid pBMB7921:NZ_CP007609.1/CP007609.1; plasmid pBMB8240:NZ_CP007610.1/CP007610.1; plasmid pBMB8513:NZ_CP007611.1/CP007611.1; plasmid pBMB95:NZ_CP007614.1/CP007614.1	-	10	6877	6265	9/4/14	4/2/17	Complete Genome	Huazhong Agricultural University	SAMN02797740	GCA_000747545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/545/GCA_000747545.1_ASM74754v1	-	YBT-1520
Streptococcus pneumoniae	1313	PRJNA229402	229402	Terrabacteria group	Firmicutes	2.04063	39.5	-	JFJG01	188	2171	1992	10/2/14	3/10/17	Scaffold	Harvard Medical School / Massachusetts Eye and Ear Infirmary	SAMN02641381	GCA_000762685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/685/GCA_000762685.1_Sp_0391.v1.0	-	SC_0391
Lactococcus lactis subsp. lactis	1360	PRJNA320711	320711	Terrabacteria group	Firmicutes	2.53546	34.9309	chromosome:NZ_CP015903.1/CP015903.1; plasmid pUC08A:NZ_CP016726.1/CP016726.1; plasmid pUC08B:NZ_CP016727.1/CP016727.1; plasmid pUC08C:NZ_CP016728.1/CP016728.1	-	4	2522	2310	4/4/17	4/6/17	Complete Genome	University College Cork	SAMN04956293	GCA_002078995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/995/GCA_002078995.1_ASM207899v1	28356072	UC08
Mycobacterium tuberculosis 1821ADB45	1334084	PRJNA203196	203196	Terrabacteria group	Actinobacteria	4.41153	65.5	chromosome:NZ_CP009206.1/CP009206.1	-	1	4279	4076	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837658	GCA_001997665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/665/GCA_001997665.1_ASM199766v1	27261264	1821ADB45
Haemophilus influenzae	727	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.99013	39.5	-	JVSA01	41	1976	1843	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197346	GCA_001054455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/455/GCA_001054455.1_ASM105445v1	26230489	156_HINF
Mycobacterium avium subsp. paratuberculosis	1770	PRJNA290494	290494	Terrabacteria group	Actinobacteria	4.7718	69.3	-	LGSD01	90	4527	4281	10/27/16	4/5/17	Contig	Memorial University of Newfoundland	SAMN03892643	GCA_001855375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/375/GCA_001855375.1_ASM185537v1	-	NL 96E
Lactococcus lactis subsp. lactis	1360	PRJNA294255	294255	Terrabacteria group	Firmicutes	2.47306	34.9	-	LKLX01	198	2500	2322	12/4/15	4/4/17	Contig	Radboudumc	SAMN04026654	GCA_001456865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/865/GCA_001456865.1_ASM145686v1	-	NCDO895
Bacillus cereus VDM062	1053250	PRJNA70467	70467	Terrabacteria group	Firmicutes	6.01159	35.4	-	AHFS01	7	6320	5852	8/15/12	6/15/17	Scaffold	Broad Institute	SAMN02596882	GCA_000290655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/655/GCA_000290655.1_Baci_cere_VDM062_V1	-	VDM062
Staphylococcus epidermidis VCU014	904316	PRJNA53715	53715	Terrabacteria group	Firmicutes	2.51066	32.1	-	JHQB01	77	2500	2361	4/11/14	3/24/17	Contig	J. Craig Venter Institute	SAMN00116879	GCA_000626815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/815/GCA_000626815.1_gsevcu014v01	-	VCU014
Lactococcus lactis subsp. lactis	1360	PRJNA320712	320712	Terrabacteria group	Firmicutes	2.53036	34.9263	chromosome:NZ_CP015904.1/CP015904.1; plasmid pUC11A:NZ_CP016720.1/CP016720.1; plasmid pUC11B:NZ_CP016721.1/CP016721.1; plasmid pUC11C:NZ_CP016722.1/CP016722.1; plasmid pUC11D:NZ_CP016723.1/CP016723.1; plasmid pUC11F:NZ_CP016725.1/CP016725.1	-	6	2505	2307	4/4/17	4/10/17	Complete Genome	University College Cork	SAMN04956294	GCA_002078475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/475/GCA_002078475.1_ASM207847v1	28356072	UC11
Yersinia pestis subsp. microtus bv. Altaica	385967	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.64611	47.6	-	MIED01	167	4446	4125	1/26/17	3/29/17	Scaffold	SRCAMB	SAMN05521427	GCA_001972515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/515/GCA_001972515.1_ASM197251v1	-	SCPM-O-DNA-02
Pseudomonas fluorescens	294	PRJNA236098	236098	Proteobacteria	Gammaproteobacteria	6.25036	60.4	-	LRMR01	47	5643	5470	1/27/16	4/4/17	Contig	NIH	SAMN03983770	GCA_001541845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/845/GCA_001541845.1_ASM154184v1	27151797	Ps006
Bacillus thuringiensis MC28	1195464	PRJNA167562	167562	Terrabacteria group	Firmicutes	6.69453	34.9245	chromosome:NC_018693.1/CP003687.1; plasmid pMC183:NC_018686.1/CP003691.1; plasmid pMC189:NC_018687.1/CP003692.1; plasmid pMC319:NC_018688.1/CP003693.1; plasmid pMC429:NC_018689.1/CP003694.1; plasmid pMC54:NC_018694.1/CP003689.1; plasmid pMC8:NC_018684.1/CP003688.1; plasmid pMC95:NC_018685.1/CP003690.1	-	8	7027	6548	10/1/12	6/15/17	Complete Genome	Rice Research Institution of SICAU 	SAMN02603757	GCA_000300475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/475/GCA_000300475.1_ASM30047v1	23209229	MC28
Bacillus cereus	1396	PRJNA280150	280150	Terrabacteria group	Firmicutes	5.98083	34.921	chromosome:NZ_CP011155.1/CP011155.1; plasmid pRML01:NZ_CP011156.1/CP011156.1; plasmid pRML02:NZ_CP011157.1/CP011157.1	-	3	6338	5860	5/2/16	3/28/17	Complete Genome	National Institutes for Food and Drug Control	SAMN03457175	GCA_001635995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/995/GCA_001635995.1_ASM163599v1	-	HN001
Bacillus thuringiensis serovar kurstaki str. HD-1	1261129	PRJNA181182	181182	Terrabacteria group	Firmicutes	6.76659	34.9182	chromosome:NZ_CP004870.1/CP004870.1; plasmid pBMB14:NZ_CP004883.1/CP004883.1; plasmid pBMB2062:NZ_CP004878.1/CP004878.1; plasmid pBMB299:NZ_CP004876.1/CP004876.1; plasmid pBMB431:NZ_CP004877.1/CP004877.1; plasmid pBMB46:NZ_CP004871.1/CP004871.1; plasmid pBMB64:NZ_CP004872.1/CP004872.1; plasmid pBMB65:NZ_CP004873.1/CP004873.1; plasmid pBMB74:NZ_CP004874.1/CP004874.1; plasmid pBMB7635:NZ_CP004879.1/CP004879.1; plasmid pBMB8240:NZ_CP004880.1/CP004880.1; plasmid pBMB8513:NZ_CP004881.1/CP004881.1; plasmid pBMB95:NZ_CP004875.1/CP004875.1; plasmid pBMBLin15:NZ_CP004882.1/CP004882.1	-	14	7173	6538	7/2/14	4/2/17	Complete Genome	HUAZHONG AGRICULTURAL UNIVERSITY	SAMN02898393	GCA_000717535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/535/GCA_000717535.1_ASM71753v1	-	HD-1
Bacillus cereus 03BB108	451709	PRJNA235227	235227	Terrabacteria group	Firmicutes	6.06873	34.9176	chromosome:NZ_CP009641.1/CP009641.1; plasmid pBFI_1:NZ_CP009639.1/CP009639.1; plasmid pBFI_2:NZ_CP009636.1/CP009636.1; plasmid pBFI_3:NZ_CP009640.1/CP009640.1; plasmid pBFI_4:NZ_CP009638.1/CP009638.1; plasmid pBFI_5:NZ_CP009637.1/CP009637.1; plasmid pBFI_6:NZ_CP009635.1/CP009635.1; plasmid pBFI_7:NZ_CP009634.1/CP009634.1	-	8	6504	6123	2/5/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03107384	GCA_000832865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/865/GCA_000832865.1_ASM83286v1	25931591	03BB108
Bacillus thuringiensis serovar kurstaki str. YBT-1520	570416	PRJNA181183	181183	Terrabacteria group	Firmicutes	6.58054	34.9134	chromosome:NZ_CP004858.1/CP004858.1; plasmid pBMB11:NZ_CP004863.1/CP004863.1; plasmid pBMB2062:NZ_CP004859.1/CP004859.1; plasmid pBMB293:NZ_CP004861.1/CP004861.1; plasmid pBMB422:NZ_CP004860.1/CP004860.1; plasmid pBMB53:NZ_CP004862.1/CP004862.1; plasmid pBMB67:NZ_CP004869.1/CP004869.1; plasmid pBMB7635:NZ_CP004867.1/CP004867.1; plasmid pBMB7921:NZ_CP004866.1/CP004866.1; plasmid pBMB8240:NZ_CP004865.1/CP004865.1; plasmid pBMB8513:NZ_CP004864.1/CP004864.1; plasmid pBMB94:NZ_CP004868.1/CP004868.1	-	12	6942	6278	5/12/14	4/2/17	Complete Genome	HUAZHONG AGRICULTURAL UNIVERSITY	SAMN02776149	GCA_000688795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/795/GCA_000688795.1_ASM68879v1	-	YBT-1520
Bacillus cereus	1396	PRJNA280144	280144	Terrabacteria group	Firmicutes	6.11289	34.9099	chromosome:NZ_CP011151.1/CP011151.1; plasmid pRML04:NZ_CP011152.1/CP011152.1	-	2	6329	5899	5/2/16	3/28/17	Complete Genome	National Institutes for Food and Drug Control	SAMN03457169	GCA_001635915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/915/GCA_001635915.1_ASM163591v1	-	CMCC P0021
Pseudomonas fluorescens	294	PRJNA315014	315014	Proteobacteria	Gammaproteobacteria	6.62353	58.8	-	LUKJ01	3	6214	5900	4/21/16	4/5/17	Contig	Lawrence Berkeley National Laboratory	SAMN04547022	GCA_001625455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/625/455/GCA_001625455.1_ASM162545v1	-	FW300-N1B4
Yersinia pestis subsp. microtus bv. Caucasica	385966	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.56775	47.6	-	MTZW01	182	4404	4062	5/10/17	5/22/17	Scaffold	SRCAMB	SAMN04993042	GCA_002127355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/355/GCA_002127355.1_ASM212735v1	-	SCPM-O-B-7042
Bacillus cereus	1396	PRJNA280148	280148	Terrabacteria group	Firmicutes	6.09799	34.9092	chromosome:NZ_CP011153.1/CP011153.1; plasmid pRML05:NZ_CP011154.1/CP011154.1	-	2	6331	5895	5/2/16	3/28/17	Complete Genome	National Institutes for Food and Drug Control	SAMN03457174	GCA_001635955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/635/955/GCA_001635955.1_ASM163595v1	-	CMCC P0011
Staphylococcus epidermidis VCU050	904322	PRJNA53727	53727	Terrabacteria group	Firmicutes	2.40091	32.1	-	JHQC01	43	2393	2210	4/11/14	3/24/17	Contig	J. Craig Venter Institute	SAMN00116878	GCA_000627055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/055/GCA_000627055.1_gsevcu050v01	-	VCU050
Bacillus cereus VDM034	1053248	PRJNA70463	70463	Terrabacteria group	Firmicutes	5.97033	35.3	-	AHFQ01	10	6235	5803	8/15/12	6/15/17	Scaffold	Broad Institute	SAMN02596880	GCA_000290675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/675/GCA_000290675.1_Baci_cere_VDM034_V1	-	VDM034
Lactococcus lactis subsp. lactis JCM 5805 = NBRC 100933	1236944	PRJDB1317	231374	Terrabacteria group	Firmicutes	2.54762	35.2	-	BCNL01	40	2595	2406	1/6/16	4/5/17	Contig	National Institute of Technology and Evaluation	SAMD00034154	GCA_001514475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/475/GCA_001514475.1_ASM151447v1	-	NBRC 100933
Mycobacterium avium subsp. paratuberculosis	1770	PRJNA290494	290494	Terrabacteria group	Actinobacteria	4.77683	69.3	-	LGSA01	94	4529	4280	10/27/16	4/5/17	Contig	Memorial University of Newfoundland	SAMN03892638	GCA_001855435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/435/GCA_001855435.1_ASM185543v1	-	NL 95A
Haemophilus influenzae	727	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.94076	38.1	-	JVDE01	43	2001	1854	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197732	GCA_001055275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/275/GCA_001055275.1_ASM105527v1	26230489	536_HINF
Mycobacterium tuberculosis TRS1	1334047	PRJNA203159	203159	Terrabacteria group	Actinobacteria	4.41153	65.4	chromosome:NZ_CP009207.1/CP009207.1	-	1	4309	4083	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837622	GCA_001997695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/695/GCA_001997695.1_ASM199769v1	27261264	TRS1
Bacillus thuringiensis serovar thuringiensis str. IS5056	1286404	PRJNA187142	187142	Terrabacteria group	Firmicutes	6.77159	34.905	chromosome:NC_020376.1/CP004123.1; plasmid pIS56-107:NC_020393.1/CP004134.1; plasmid pIS56-11:NC_020391.1/CP004127.1; plasmid pIS56-15:NC_020379.1/CP004128.1; plasmid pIS56-16:NC_020380.1/CP004129.1; plasmid pIS56-233:NC_020394.1/CP004135.1; plasmid pIS56-285:NC_020384.1/CP004136.1; plasmid pIS56-328:NC_020385.1/CP004137.1; plasmid pIS56-39:NC_020381.1/CP004130.1; plasmid pIS56-6:NC_020390.1/CP004124.1; plasmid pIS56-63:NC_020392.1/CP004131.1; plasmid pIS56-68:NC_020382.1/CP004132.1; plasmid pIS56-8:NC_020377.1/CP004125.1; plasmid pIS56-85:NC_020383.1/CP004133.1; plasmid pIS56-9:NC_020378.1/CP004126.1	-	15	7108	6677	2/22/13	6/15/17	Complete Genome	University of Bialystok	SAMN02604143	GCA_000341665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/665/GCA_000341665.1_ASM34166v1	23516221	IS5056
Streptococcus pneumoniae	1313	PRJNA229402	229402	Terrabacteria group	Firmicutes	2.01615	39.6	-	JFJH01	89	2226	2004	10/2/14	3/10/17	Scaffold	Harvard Medical School / Massachusetts Eye and Ear Infirmary	SAMN02641388	GCA_000762705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/705/GCA_000762705.1_Sp_2441.v1.0	-	SC_2441
Bacillus thuringiensis	1428	PRJNA280152	280152	Terrabacteria group	Firmicutes	6.78414	34.9011	chromosome:NZ_CP011349.1/CP011349.1; plasmid pYC1:NZ_CP011350.1/CP011350.1; plasmid pYC10:NZ_CP011355.1/CP011355.1; plasmid pYC11:NZ_CP011356.1/CP011356.1; plasmid pYC20:NZ_CP011357.1/CP011357.1; plasmid pYC2226:NZ_CP011358.1/CP011358.1; plasmid pYC3:NZ_CP011351.1/CP011351.1; plasmid pYC4:NZ_CP011352.1/CP011352.1; plasmid pYC5:NZ_CP011353.1/CP011353.1; plasmid pYC6:NZ_CP011354.1/CP011354.1	-	10	7187	6565	6/2/15	4/3/17	Complete Genome	"Hunan Academy of Agricultural Science,"	SAMN03457230	GCA_001017635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/635/GCA_001017635.1_ASM101763v1	-	YC-10
Acinetobacter equi	1324350	PRJNA296861	296861	Proteobacteria	Gammaproteobacteria	3.05427	34.9	chromosome:NZ_CP012808.1/CP012808.1	-	1	2901	2708	10/6/15	4/6/17	Complete Genome	Robert Koch-Institut	SAMN04110325	GCA_001307195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/195/GCA_001307195.1_ASM130719v1	26620413	114
Streptococcus pyogenes ABC020031898	1439067	PRJNA233254	233254	Terrabacteria group	Firmicutes	1.81784	38.6	-	JJFO01	8	1840	1698	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567603	GCA_000629905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/905/GCA_000629905.1_Stre_pyog_ABC020031898_V1	-	ABC020031898
Leptospira interrogans serovar Copenhageni str. 2002000634	1291317	PRJNA188970	188970	Spirochaetes	Spirochaetia	4.61577	35	-	AOWT01	148	4133	3775	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920610	GCA_000343005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/005/GCA_000343005.1_CA_glsol041	-	2002000634
Pseudomonas putida JCM 9802	1295131	PRJDB836	243741	Proteobacteria	Gammaproteobacteria	6.03523	61.7	-	BBDA01	472	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000549	GCA_001312145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/145/GCA_001312145.1_ASM131214v1	-	JCM 9802
Bacillus anthracis	1392	PRJNA316704	316704	Terrabacteria group	Firmicutes	5.45005	35.0599	plasmid pXO2:NZ_CM008136.1/CM008136.1	LVWF01	31	6087	5649	7/26/17	8/21/17	Scaffold	University of Pretoria	SAMN04589793	GCA_002233635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/635/GCA_002233635.1_ASM223363v1	-	DS201579
Shigella flexneri	623	PRJNA315925	315925	Proteobacteria	Gammaproteobacteria	4.51722	50.6	-	LVIN01	431	5237	4248	5/20/16	3/5/17	Contig	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04570181	GCA_001649335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/335/GCA_001649335.1_ASM164933v1	-	GX4s04
Bifidobacterium longum DJO10A	205913	PRJNA321	321	Terrabacteria group	Actinobacteria	2.37528	59.9	-	AABM02	120	2111	1815	10/14/02	4/21/17	Scaffold	DOE Joint Genome Institute	SAMN02441414	GCA_000166895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/895/GCA_000166895.2_ASM16689v2	-	DJO10A
Prochlorococcus sp. MIT 0801	1501269	PRJNA246696	246696	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.9292	34.9	chromosome:NZ_CP007754.1/CP007754.1	-	1	2083	2008	9/25/14	4/9/17	Complete Genome	MIT	SAMN02769563	GCA_000757865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/865/GCA_000757865.1_ASM75786v1	-	MIT 0801
Acinetobacter baumannii	470	PRJNA355850	355850	Proteobacteria	Gammaproteobacteria	4.09129	39.097	-	-	2	3976	3801	12/27/16	9/19/17	Chromosome	UNAM	SAMN06093832	GCA_001922425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/425/GCA_001922425.2_ASM192242v2	-	11510
Streptococcus agalactiae GB00003	1154892	PRJNA86457	86457	Terrabacteria group	Firmicutes	2.14408	35.3	-	ALSM01	25	2223	2115	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991158	GCA_000288155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/155/GCA_000288155.1_ASM28815v1	-	GB00003
Streptococcus suis YS19	1214191	PRJNA171453	171453	Terrabacteria group	Firmicutes	2.1088	41.1	-	ALMF01	60	2138	2015	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469557	GCA_000441055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/055/GCA_000441055.1_version1	-	YS19
Pseudomonas syringae CC1629	1357282	PRJNA211406	211406	Proteobacteria	Gammaproteobacteria	5.93293	57.7	-	AVEE02	261	5648	5246	8/20/13	3/24/17	Contig	University of Arizona	SAMN02471553	GCA_000452645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/645/GCA_000452645.2_CC1629_092313_2.0	24459267	CC1629
Legionella pneumophila subsp. fraseri	91892	PRJNA239272	239272	Proteobacteria	Gammaproteobacteria	3.46936	38.2	-	JFIM01	53	3151	2965	3/7/14	3/24/17	Scaffold	Beijing Institute of Microbiology and Epidemiology	SAMN02650967	GCA_000586315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/315/GCA_000586315.1_ATCC_33156	-	ATCC 33156
Shigella sonnei	624	PRJNA393761	393761	Proteobacteria	Gammaproteobacteria	4.54304	50.8	-	NMXY01	507	5203	4076	8/4/17	8/6/17	Contig	Christian Medical College	SAMN07340961	GCA_002242055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/055/GCA_002242055.1_ASM224205v1	-	FC653
Bacteroides fragilis str. S24L34	1339325	PRJNA206168	206168	FCB group	Bacteroidetes/Chlorobi group	5.24975	43.1	-	JGEO01	65	4650	4394	3/20/14	4/2/17	Contig	IGS	SAMN02315064	GCA_000599325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/325/GCA_000599325.1_ASM59932v1	-	S24L34
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.18391	38.4	-	NGPY01	92	2156	1950	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848380	GCA_002254085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/085/GCA_002254085.1_ASM225408v1	-	105k
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.0821	67	-	MURH01	169	7678	7200	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001844	GCA_001991815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/815/GCA_001991815.1_ASM199181v1	-	VC10287
Burkholderia pseudomallei	28450	PRJNA244414	244414	Proteobacteria	Betaproteobacteria	7.35442	67.8771	chromosome:NZ_CP008764.1/CP008764.1; chromosome 2:NZ_CP008763.1/CP008763.1	-	2	7595	7009	9/18/14	3/25/17	Chromosome	Los Alamos National Laboratory	SAMN02866335	GCA_000756105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/105/GCA_000756105.1_ASM75610v1	25414490	MSHR346
Chlamydia trachomatis E/SotonE8	1071761	PRJEA71083	71083	PVC group	Chlamydiae	1.05632	41.2638	chromosome:NC_020942.1/HE601803.1; plasmid pSotonE8:NC_020960.1/HE603233.1	-	2	973	904	3/13/12	3/23/17	Chromosome	Sanger Institute	SAMEA2272341	GCA_000318685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/685/GCA_000318685.1_ASM31868v1	22406642	E/SotonE8
Bacillus thuringiensis	1428	PRJNA318330	318330	Terrabacteria group	Firmicutes	5.77264	35.1	-	LXLJ01	123	6186	5719	10/12/16	4/5/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04819577	GCA_001757755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/755/GCA_001757755.1_ASM175775v1	-	GOE5
Vibrio cholerae CP1037(10)	991992	PRJNA63991	63991	Proteobacteria	Gammaproteobacteria	3.92257	47.6	-	ALDB01	78	3692	3485	10/4/12	3/23/17	Scaffold	Institute for Genome Sciences	SAMN00622034	GCA_000302965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/965/GCA_000302965.1_ASM30296v1	26980836	CP1037(10)
Clostridioides difficile CD40	1151263	PRJNA85699	85699	Terrabacteria group	Firmicutes	4.06938	28.6	-	AVGT01	97	3834	3614	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766614	GCA_000448965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/965/GCA_000448965.2_ASM44896v2	-	CD40
Francisella tularensis	263	PRJNA253522	253522	Proteobacteria	Gammaproteobacteria	1.84652	32.3	-	JPMP01	95	1983	1547	2/25/16	4/5/17	Contig	Swedish Defence Research Agency	SAMN02870489	GCA_001574635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/635/GCA_001574635.1_ASM157463v1	-	NO-15/2011
Brucella abortus F5/04-7	1160202	PRJNA173624	173624	Proteobacteria	Alphaproteobacteria	3.27993	57.2	-	AQJQ01	8	3364	3133	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00811177	GCA_000370425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/425/GCA_000370425.1_Bruc_abor_F5_04-7_V1	-	F5/04-7
Xanthomonas citri subsp. citri	611301	PRJEB7188	265966	Proteobacteria	Gammaproteobacteria	5.22548	64.8	-	CDAX01	338	4777	4375	11/10/14	4/2/17	Contig	CIRAD	SAMEA2827562	GCA_000825305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/305/GCA_000825305.1_XACG117	-	LG117
Xanthomonas oryzae pv. oryzae	64187	PRJNA269457	269457	Proteobacteria	Gammaproteobacteria	4.29896	63.9	-	JXGB01	450	4263	3478	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252563	GCA_001928165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/165/GCA_001928165.1_ASM192816v1	-	IXO220
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.04275	37.6	-	MLLW01	393	2092	1831	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297036	GCA_001867785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/785/GCA_001867785.1_ASM186778v1	27118061	AWRIB241
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.17753	45.2	-	LRTE01	47	5016	4765	4/4/16	3/19/17	Scaffold	Health Canada	SAMN04441021	GCA_001609135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/135/GCA_001609135.1_ASM160913v1	-	A3EZ770
Bacillus subtilis subsp. spizizenii ATCC 6633	703612	PRJNA43011	43011	Terrabacteria group	Firmicutes	3.97858	43.8	-	ADGS01	37	4081	3893	5/17/10	7/7/17	Contig	"Department of Microbiology, University of Illinois, Urbana-Champaign"	SAMN02471820	GCA_000177595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/595/GCA_000177595.1_ASM17759v1	-	ATCC 6633
Desulfurobacterium thermolithotrophum DSM 11699	868864	PRJNA51497	51497	Aquificae	Aquificae	1.54197	34.9	chromosome:NC_015185.1/CP002543.1	-	1	1588	1508	3/2/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713591	GCA_000191045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/045/GCA_000191045.1_ASM19104v1	22675590	DSM 11699
Clostridium botulinum	1491	PRJNA239370	239370	Terrabacteria group	Firmicutes	3.97799	28.1	-	JFGH01	310	3887	3226	7/18/14	3/24/17	Contig	Centers for Disease Control and Prevention	SAMN02664948	GCA_000730715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/715/GCA_000730715.1_ASM73071v1	25031122	CDC48719
Enterococcus faecalis ERV37	1134790	PRJNA81969	81969	Terrabacteria group	Firmicutes	3.12022	37.3	-	ALZO01	126	3228	3064	8/27/12	3/27/17	Scaffold	Washington University	SAMN02299466	GCA_000294105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/105/GCA_000294105.2_ASM29410v2	-	ERV37
Streptococcus mutans TCI-82	1074106	PRJNA71965	71965	Terrabacteria group	Firmicutes	1.94123	36.7	-	AGMV01	48	1955	1864	10/6/11	3/22/17	Contig	JCVI	SAMN02436524	GCA_000230125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/125/GCA_000230125.2_SMUT3-NEX_34-82	-	TCI-82
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14548	52.4	-	CQOF01	77	2504	2190	3/23/15	4/11/17	Contig	SC	SAMEA1690501	GCA_001084085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/085/GCA_001084085.1_8289_2_5	-	GCGS005
Enterococcus faecium C497	1134815	PRJNA82019	82019	Terrabacteria group	Firmicutes	2.72727	37.9	-	AMBC01	180	2766	2643	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299490	GCA_000295375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/375/GCA_000295375.2_ASM29537v2	-	C497
Stenotrophomonas maltophilia	40324	PRJNA381518	381518	Proteobacteria	Gammaproteobacteria	4.92999	66.5	-	NBYP01	80	4626	4454	6/9/17	6/12/17	Contig	Curtin University	SAMN06678536	GCA_002189545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/545/GCA_002189545.1_ASM218954v1	-	AB550
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12767	41.2	-	CWFE01	79	2058	1876	6/24/15	3/26/17	Contig	SC	SAMEA1032836	GCA_001176405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/405/GCA_001176405.1_6903_8_72	-	EQUI0217
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.29345	40.3	-	LQDE01	29	2154	2056	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366500	GCA_001929985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/985/GCA_001929985.1_ASM192998v1	-	2165PM
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	3.00569	46.5	-	JTIC01	86	3118	2869	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196624	GCA_001656945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/945/GCA_001656945.1_ASM165694v1	-	Lrh27
Brucella melitensis UK29/05	1169227	PRJNA173505	173505	Proteobacteria	Alphaproteobacteria	3.30717	57.2	-	AQKJ01	3	3385	3167	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN00839702	GCA_000370805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/805/GCA_000370805.1_Bruc_meli_UK29_05_V1	-	UK29/05
Bacillus thuringiensis	1428	PRJNA330597	330597	Terrabacteria group	Firmicutes	6.15274	34.8926	chromosome:NZ_CP016588.1/CP016588.1; plasmid pBTKNU07-01:NZ_CP016589.1/CP016589.1; plasmid pBTKNU07-02:NZ_CP016590.1/CP016590.1	-	3	6471	5913	7/22/16	4/5/17	Complete Genome	"Shin's Lab., Kyungpook National University"	SAMN05417762	GCA_001692675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/675/GCA_001692675.1_ASM169267v1	-	KNU-07
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.43116	53.6	-	NDHT01	36	2359	2182	4/28/17	5/3/17	Contig	Institute for Medical Research	SAMN06311209	GCA_002115335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/335/GCA_002115335.1_ASM211533v1	-	c113
Mycoplasma pneumoniae	2104	PRJNA291007	291007	Terrabacteria group	Tenericutes	0.818527	40	-	LHPW01	13	805	691	9/22/15	4/10/17	Scaffold	Centre for genomic regulation (CRG)	SAMN03897307	GCA_001296825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/825/GCA_001296825.1_ASM129682v1	26335586	Mympn_4358
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.65496	47.1	-	CQAJ01	34	4363	4186	3/23/15	3/26/17	Scaffold	SC	SAMEA980177	GCA_001085265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/265/GCA_001085265.1_5103_7_7	-	ERL053435
Serratia marcescens	615	PRJNA326205	326205	Proteobacteria	Gammaproteobacteria	5.85021	59	-	MSEC01	1632	5336	5072	1/9/17	3/29/17	Contig	Norwegian University of Life Sciences	SAMN05271511	GCA_001940505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/505/GCA_001940505.1_ASM194050v1	-	BJL200
Lactobacillus plantarum	1590	PRJNA311909	311909	Terrabacteria group	Firmicutes	3.60356	44	-	LSST01	121	3609	3361	3/23/16	3/28/17	Contig	National Centre for Cell Science Pune	SAMN04490175	GCA_001596195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/195/GCA_001596195.1_ASM159619v1	-	E2C2
Campylobacter coli BIGS0010	1247735	PRJNA177352	177352	Proteobacteria	delta/epsilon subdivisions	1.66089	31.5	-	ANGU01	191	1737	1605	11/23/12	3/15/17	Contig	Swansea University	SAMN01795766	GCA_000314205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/205/GCA_000314205.1_ASM31420v1	23279096	BIGS0010
Burkholderia sp. MSMB1589WGS	1636425	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.78765	67.4	-	LNJT01	8	6534	5923	5/2/16	4/12/17	Contig	Northern Arizona University	SAMN03449341	GCA_001636105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/105/GCA_001636105.1_ASM163610v1	-	MSMB1589WGS
Propionibacterium acnes HL096PA3	765057	PRJNA40729	40729	Terrabacteria group	Actinobacteria	2.5561	60	-	ADWB01	24	2605	2471	3/31/11	3/30/17	Scaffold	WUGSC	SAMN02299430	GCA_000194825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/825/GCA_000194825.1_ASM19482v1	-	HL096PA3
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.5377	32.6	-	CUEQ01	64	2511	2387	3/31/15	3/26/17	Contig	SC	SAMEA1035034	GCA_001237485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/485/GCA_001237485.1_7067_4_81	-	M-176
Enterobacter cloacae subsp. cloacae	336306	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.01372	54.8	-	LDCI01	67	4814	4623	5/21/15	3/26/17	Contig	JCVI	SAMN03495972	GCA_001011715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/715/GCA_001011715.1_ASM101171v1	-	GN02174
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.07951	59.4	-	FKZE01	31	4938	4755	5/19/16	2/21/17	Scaffold	SC	SAMEA2273766	GCA_900083925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/925/GCA_900083925.1_12045_7_1	-	2880STDY5682691
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.53685	56.7	-	NDXX01	213	4464	4178	4/20/17	4/22/17	Contig	FDA/CFSAN	SAMN06712275	GCA_002102535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/535/GCA_002102535.1_ASM210253v1	-	MOD1-cr14
Mycobacterium abscessus subsp. bolletii 1S-152-0914	1001705	PRJNA65139	65139	Terrabacteria group	Actinobacteria	4.89767	64.3	-	AKUJ01	2	4901	4794	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00672647	GCA_000271285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/271/285/GCA_000271285.1_ASM27128v1	-	1S-152-0914
Vibrio sp. JCM 19064	1481933	PRJDB1715	280177	Proteobacteria	Gammaproteobacteria	5.73219	45	-	BAXW01	87	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000395	GCA_001310735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/735/GCA_001310735.1_ASM131073v1	-	JCM 19064
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.39883	62.7	-	DCSX01	96	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455511	GCA_002325835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/835/GCA_002325835.1_ASM232583v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.62364	67.2	-	LOZC01	93	7018	6621	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449312	GCA_001527325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/325/GCA_001527325.1_ASM152732v1	-	MSMB2054
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	4.0182	38.7	-	MDIU01	87	3928	3749	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022879	GCA_001706495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/495/GCA_001706495.1_ASM170649v1	-	UKK-0556
Citrobacter freundii	546	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.09863	51.7	-	JVDC01	115	5125	4821	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197734	GCA_001055315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/315/GCA_001055315.1_ASM105531v1	26230489	538_CKOS
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.94012	55.2	-	JZZR01	71	4888	4648	3/19/15	3/25/17	Contig	JCVI	SAMN03283627	GCA_000957865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/865/GCA_000957865.1_ASM95786v1	-	35024
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.59532	54.9	-	LPPD01	75	5556	5267	12/21/15	4/6/17	Contig	JCVI	SAMN04252931	GCA_001472755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/755/GCA_001472755.1_SMART_774.v1	-	SMART_774
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.19649	64.1	-	FVHV01	9	5260	5058	3/10/17	3/18/17	Scaffold	SC	SAMEA2275656	GCA_900133635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/635/GCA_900133635.1_12163_1_12	-	934
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.38886	66.8	-	LPES01	91	7786	7419	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449466	GCA_001530785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/785/GCA_001530785.1_ASM153078v1	-	MSMB1329WGS
Pseudomonas sp. HMSC16B01	1581109	PRJNA269878	269878	Proteobacteria	Gammaproteobacteria	6.85513	66.1	-	LWNF01	145	6554	6251	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03604110	GCA_001808305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/305/GCA_001808305.1_ASM180830v1	-	HMSC16B01
Streptomyces sp. SolWspMP-sol2th	1157636	PRJNA169755	169755	Terrabacteria group	Actinobacteria	7.6546	72.5	-	ARPF01	28	6479	6231	4/23/14	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02951871	GCA_000647875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/875/GCA_000647875.1_ASM64787v1	-	SolWspMP-sol2th
Bacillus sp. B14905	388400	PRJNA18949	18949	Terrabacteria group	Firmicutes	4.49727	37.6	-	AAXV01	99	4462	4148	3/6/07	5/18/17	Contig	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02436156	GCA_000169315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/315/GCA_000169315.1_ASM16931v1	-	B14905
Acinetobacter sp. 1396970	1310615	PRJNA194691	194691	Proteobacteria	Gammaproteobacteria	4.18986	38.9	-	JEWI01	336	4235	3779	2/25/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02380505	GCA_000581115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/115/GCA_000581115.1_ASM58111v1	-	1396970
Sphingomonas sp. CCH9-H8	1768772	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	4.29053	66.1	-	LSJF01	659	4304	3867	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299456	GCA_001556635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/635/GCA_001556635.1_ASM155663v1	-	CCH9-H8
Clostridium sp. CAG:226	1262781	PRJEB769	206651	Terrabacteria group	Firmicutes	2.12788	52.8	-	CAWN01	182	2069	2034	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138439	GCA_000431035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/035/GCA_000431035.1_MGS226	-	-
Rhodococcus sp. RS1C4	2022522	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.91924	64.5	-	NOXZ01	79	5558	5415	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376393	GCA_002258225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/225/GCA_002258225.1_ASM225822v1	-	RS1C4
Enterobacter cloacae complex sp. 35009	1870934	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.04264	55.9	-	JZZX01	74	4905	4675	3/19/15	4/20/17	Contig	JCVI	SAMN03283637	GCA_000957765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/765/GCA_000957765.1_ASM95776v1	-	35009
Staphylococcus sp. HMSC068G03	1739481	PRJNA300131	300131	Terrabacteria group	Firmicutes	2.52705	33.7	-	LTUO01	44	2390	2320	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480402	GCA_001814565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/565/GCA_001814565.1_ASM181456v1	-	HMSC068G03
Corynebacterium sp. HMSC078C09	1739478	PRJNA300128	300128	Terrabacteria group	Actinobacteria	2.66901	61	-	LTUR01	72	2514	2381	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480397	GCA_001814525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/525/GCA_001814525.1_ASM181452v1	-	HMSC078C09
Arthrobacter sp. NIO-1057	993071	PRJEB15021	336299	Terrabacteria group	Actinobacteria	3.54182	56.1	-	FMAT01	13	3320	3194	8/3/16	4/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487802	GCA_900094805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/805/GCA_900094805.1_IMG-taxon_2616645010_annotated_assembly	-	NIO-1057
Streptococcus sp. HMSC076H10	1739519	PRJNA300170	300170	Terrabacteria group	Firmicutes	1.95284	35.2	-	LTTF01	36	1962	1891	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480434	GCA_001815305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/305/GCA_001815305.1_ASM181530v1	-	HMSC076H10
Mycobacterium sp. 1477680.9	1834079	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.41873	67.7	-	LZSD01	501	5377	4901	6/17/16	4/12/17	Contig	JCVI	SAMN04634166	GCA_001665365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/365/GCA_001665365.1_ASM166536v1	-	1477680.9
Prevotella sp. CAG:485	1262927	PRJEB901	206912	FCB group	Bacteroidetes/Chlorobi group	2.4099	53	-	CBIE01	114	1999	1956	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138759	GCA_000437495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/495/GCA_000437495.1_MGS485	-	-
Enterococcus sp. 7L76	657310	PRJNA39181	39181	Terrabacteria group	Firmicutes	3.09666	37.8	chromosome:FP929058.1	-	1	2348	2295	3/25/10	2/27/15	Chromosome	MetaHIT	SAMEA3138365	GCA_000210115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/115/GCA_000210115.1_ASM21011v1	-	7L76
Paenibacillus sp. FSL H8-0259	1920423	PRJNA343020	343020	Terrabacteria group	Firmicutes	8.17738	51.3	-	MRTL01	66	7054	6835	1/18/17	4/17/17	Contig	Cornell University	SAMN05929615	GCA_001956105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/105/GCA_001956105.1_ASM195610v1	-	FSL H8-0259
uncultured Ruminococcus sp.	165186	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.61303	41.5	-	FMEC01	36	3479	3418	8/16/16	8/16/16	Scaffold	SC	SAMEA3545289	GCA_900066345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/345/GCA_900066345.1_13414_6_65	-	-
uncultured Bacteroides sp.	162156	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	5.29978	42	-	FMFB01	60	4091	4028	8/16/16	8/16/16	Scaffold	SC	SAMEA3545269	GCA_900066265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/265/GCA_900066265.1_13414_6_45	-	-
Prochlorococcus sp. scB241_528N17	1471456	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.53006	31.3	-	JFLG01	144	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671327	GCA_000634735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/735/GCA_000634735.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. P159	1895627	PRJNA341045	341045	Proteobacteria	delta/epsilon subdivisions	1.58344	33.6	-	MJLF01	17	1625	1545	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687065	GCA_002139025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/025/GCA_002139025.1_ASM213902v1	28854596	P159
Rhizobium sp. CF097	1500301	PRJNA247547	247547	Proteobacteria	Alphaproteobacteria	6.85958	60.3	-	JQMF01	61	6672	6261	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02787135	GCA_000744565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/565/GCA_000744565.1_ASM74456v1	-	CF097
Mesorhizobium sp. SEMIA 3007	1862350	PRJNA325666	325666	Proteobacteria	Alphaproteobacteria	6.96852	63	-	MDLH01	2	6814	6534	8/23/16	4/13/17	Contig	Univ Estadual Paulista UNESP/FCAV	SAMN05277861	GCA_001708695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/695/GCA_001708695.1_ASM170869v1	-	SEMIA 3007
Microbacterium sp. SCN 70-200	1660113	PRJNA279279	279279	Terrabacteria group	Actinobacteria	3.07726	69.6	-	MEEJ01	33	2828	2690	9/13/16	9/13/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03652456	GCA_001724395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/395/GCA_001724395.1_ASM172439v1	26031303	-
Bacillus velezensis	492670	PRJNA395369	395369	Terrabacteria group	Firmicutes	3.81893	46.6	-	NPCJ01	63	3826	3655	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372711	GCA_002271515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/515/GCA_002271515.1_assembly-7551-2_v1	-	7551-2
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.90332	56.9	-	FXQV01	107	5998	5605	4/28/17	5/6/17	Scaffold	SC	SAMEA2609497	GCA_900181755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/755/GCA_900181755.1_14936_2_34	-	3189STDY5864887
Staphylococcus argenteus	985002	PRJEB6387	256285	Terrabacteria group	Firmicutes	2.73123	32.3	-	CCEE01	18	2708	2539	9/6/14	4/2/17	Scaffold	WTSI	SAMEA2007996	GCA_000751815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/815/GCA_000751815.1_Sa_FJABA32044V6S1	-	-
Xanthomonas phaseoli pv. phaseoli	317013	PRJNA269952	269952	Proteobacteria	Gammaproteobacteria	5.11781	64.9	-	JWTG02	158	4628	4101	12/26/14	4/11/17	Contig	University of Exeter	SAMN03257737	GCA_000808695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/695/GCA_000808695.2_NCPPB1680v2	26500625	NCPPB 1680
Xanthomonas phaseoli pv. phaseoli	317013	PRJNA270010	270010	Proteobacteria	Gammaproteobacteria	5.36429	64.6	-	JWTH02	191	4902	4360	12/26/14	4/11/17	Contig	University of Exeter	SAMN03262509	GCA_000808715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/715/GCA_000808715.2_NCPPB220v2	26500625	NCPPB 220
Staphylococcus argenteus	985002	PRJNA317277	317277	Terrabacteria group	Firmicutes	2.83846	32.2	-	LWAN01	241	2891	2636	1/23/17	4/6/17	Scaffold	Shanghai Jiao Tong University	SAMN04604742	GCA_001969635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/635/GCA_001969635.1_ASM196963v1	-	SJTU F20124
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.79643	57	-	FXRE01	102	5871	5502	4/28/17	5/6/17	Scaffold	SC	SAMEA2609509	GCA_900181785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/785/GCA_900181785.1_14936_2_41	-	3189STDY5864894
Bacillus velezensis	492670	PRJNA395369	395369	Terrabacteria group	Firmicutes	3.86945	46.4	-	NPCZ01	56	3870	3714	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372729	GCA_002272285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/285/GCA_002272285.1_assembly-7751-1_v1	-	7751-1
Microbacterium sp. SCN 69-37	1660115	PRJNA279279	279279	Terrabacteria group	Actinobacteria	2.99424	69.4	-	MEEL01	69	2881	2707	9/13/16	9/13/16	Contig	"Banfield Lab, University of California, Berkeley"	SAMN03652458	GCA_001724435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/435/GCA_001724435.1_ASM172443v1	26031303	-
Mesorhizobium sp. ORS3428	1505936	PRJNA321050	321050	Proteobacteria	Alphaproteobacteria	6.5528	63.2	-	MDFL01	191	6318	5942	10/26/16	4/13/17	Contig	University of New Hampshire	SAMN04964211	GCA_001854785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/785/GCA_001854785.1_ASM185478v1	-	ORS3428
Rhizobium sp. YS-1r	1532558	PRJNA257547	257547	Proteobacteria	Alphaproteobacteria	6.38515	60.7	-	JPYQ01	56	6121	5898	9/23/14	4/9/17	Scaffold	Oklahoma State University	SAMN02953215	GCA_000757525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/525/GCA_000757525.1_RRTA	25744986	YS-1r
Campylobacter sp. P160	1895628	PRJNA341046	341046	Proteobacteria	delta/epsilon subdivisions	1.76793	33.3	-	MJLG01	21	1827	1734	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687066	GCA_002139055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/055/GCA_002139055.1_ASM213905v1	28854596	P160
Prochlorococcus sp. scB241_528N20	1471457	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.14451	31.4	-	JFLH01	225	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671328	GCA_000634755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/755/GCA_000634755.1_De_novo_assembly_of_single-cell_genomes	24763590	-
uncultured Bacteroides sp.	162156	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	3.61401	40.2	-	FMDY01	48	3026	2947	8/16/16	8/16/16	Scaffold	SC	SAMEA3545309	GCA_900066445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/445/GCA_900066445.1_13470_2_62	-	-
uncultured Ruminococcus sp.	165186	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.62851	42.5	-	FMEL01	38	3368	3315	8/16/16	8/16/16	Scaffold	SC	SAMEA3545290	GCA_900066355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/355/GCA_900066355.1_13414_6_66	-	-
Paenibacillus sp. FSL R5-0490	1920424	PRJNA343020	343020	Terrabacteria group	Firmicutes	4.67393	42	-	MRTQ01	75	4656	4536	1/18/17	4/17/17	Contig	Cornell University	SAMN05929622	GCA_001956215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/215/GCA_001956215.1_ASM195621v1	-	FSL R5-0490
Enterococcus sp. HSIEG1	1316414	PRJNA196128	196128	Terrabacteria group	Firmicutes	3.44785	40.7054	chromosome:CM002129.1	ASKG01	1	7802	7802	8/19/13	1/8/14	Chromosome	Top Institute Food and Nutrition (TIFN)	SAMN02471221	GCA_000448585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/585/GCA_000448585.1_HSIEG1_1.0	24336366	HSIEG1
Prevotella sp. CAG:891	1262937	PRJEB1029	206920	FCB group	Bacteroidetes/Chlorobi group	2.62445	47.3	-	CBJT01	172	2098	2058	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138768	GCA_000437675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/675/GCA_000437675.1_MGS891	-	-
Mycobacterium sp. 1164966.3	1856861	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.6061	65.6	-	LZSG01	71	5199	4989	6/17/16	4/12/17	Contig	JCVI	SAMN05202168	GCA_001665395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/395/GCA_001665395.1_ASM166539v1	-	1164966.3
Streptococcus sp. HMSC072D05	1739549	PRJNA300200	300200	Terrabacteria group	Firmicutes	1.98466	41.2	-	LTSG01	68	1929	1783	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480466	GCA_001815805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/805/GCA_001815805.1_ASM181580v1	-	HMSC072D05
Arthrobacter sp. ok362	1761745	PRJEB16106	348604	Terrabacteria group	Actinobacteria	4.71349	66.3	-	FNGC01	32	4381	4158	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487913	GCA_900102785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/785/GCA_900102785.1_IMG-taxon_2609459768_annotated_assembly	-	OK362
Corynebacterium sp. HMSC077D10	1739480	PRJNA300130	300130	Terrabacteria group	Actinobacteria	2.66572	63.5	-	LTUP01	63	2472	2346	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480400	GCA_001814575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/575/GCA_001814575.1_ASM181457v1	-	HMSC077D10
Staphylococcus sp. HMSC062B11	1739493	PRJNA300143	300143	Terrabacteria group	Firmicutes	2.40682	32	-	LTUD01	118	2325	2141	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480410	GCA_001814805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/805/GCA_001814805.1_ASM181480v1	-	HMSC062B11
Enterobacter cloacae complex sp. 35651	1870941	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.3055	55.8	-	JZZF01	129	5267	4979	3/19/15	4/20/17	Contig	JCVI	SAMN03283680	GCA_000958015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/015/GCA_000958015.1_ASM95801v1	-	35651
Rhodococcus sp. 06-470-2	2022509	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.9046	64.8	-	NOYB01	50	5605	5442	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376379	GCA_002258235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/235/GCA_002258235.1_ASM225823v1	-	06-470-2
Clostridium sp. CAG:715	1262834	PRJEB987	206740	Terrabacteria group	Firmicutes	1.86791	32.7	-	CAXB01	40	1900	1861	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138443	GCA_000431115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/115/GCA_000431115.1_MGS715	-	-
Sphingomonas sp. CCH9-F2	1768778	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	4.02099	68.5	-	LSJO01	719	4004	3533	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299465	GCA_001556735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/735/GCA_001556735.1_ASM155673v1	-	CCH9-F2
Acinetobacter sp. 230853	1310651	PRJNA194727	194727	Proteobacteria	Gammaproteobacteria	3.23528	41.5	-	JEWW01	55	3069	2889	2/25/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02380519	GCA_000581195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/195/GCA_000581195.1_ASM58119v1	-	230853
Bacillus sp. m3-13	406124	PRJNA38237	38237	Terrabacteria group	Firmicutes	4.13758	40.7	-	ACPC01	50	4292	3981	4/30/10	6/15/17	Contig	Cinvestav del IPN	SAMN02469607	GCA_000175075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/075/GCA_000175075.1_ASM17507v1	20504335	m3-13
Streptomyces sp. UNC401CLCol	1449077	PRJNA234927	234927	Terrabacteria group	Actinobacteria	7.33683	72.3	-	JMLN01	49	6704	6402	5/8/14	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743369	GCA_000686765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/765/GCA_000686765.1_ASM68676v1	-	UNC401CLCol
Pseudomonas sp. HMSC08G10	1581141	PRJNA269910	269910	Proteobacteria	Gammaproteobacteria	5.19171	62.5	-	LWMZ01	59	4793	4626	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03434393	GCA_001808425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/808/425/GCA_001808425.1_ASM180842v1	-	HMSC08G10
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.10135	66.8	-	LPEU01	43	6632	6339	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449468	GCA_001530805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/805/GCA_001530805.1_ASM153080v1	-	MSMB1331WGS
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.19328	64.1	-	FVID01	15	5261	5051	3/10/17	3/18/17	Scaffold	SC	SAMEA2275668	GCA_900133785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/785/GCA_900133785.1_12163_1_24	-	946
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.64822	54.8	-	LPOU01	97	5680	5383	12/21/15	4/6/17	Contig	JCVI	SAMN04252940	GCA_001472935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/935/GCA_001472935.1_SMART_888.v1	-	SMART_888
Enterobacter hormaechei	158836	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.87582	55	-	JZZQ01	68	4767	4525	3/19/15	3/25/17	Contig	JCVI	SAMN03283634	GCA_000957885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/885/GCA_000957885.1_ASM95788v1	-	35025
Citrobacter freundii	546	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.47745	51.4	-	JUSE01	194	5445	5208	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03198018	GCA_001058505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/505/GCA_001058505.1_ASM105850v1	26230489	804_CKOS
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	3.91636	38.8	-	MDIY01	72	3792	3632	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022848	GCA_001706505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/505/GCA_001706505.1_ASM170650v1	-	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.61763	67.2	-	LOZD01	100	6992	6601	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449313	GCA_001527345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/345/GCA_001527345.1_ASM152734v1	-	MSMB2055
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.16286	63.2	-	DCSZ01	60	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451559	GCA_002325885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/885/GCA_002325885.1_ASM232588v1	28894102	-
Vibrio sp. JCM 19063	1481934	PRJDB1716	252078	Proteobacteria	Gammaproteobacteria	5.09181	44.5	-	BAXX01	231	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000394	GCA_001310755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/755/GCA_001310755.1_ASM131075v1	-	JCM 19063
Mycobacterium abscessus M139	1175632	PRJNA159701	159701	Terrabacteria group	Actinobacteria	5.0466	64.2	-	AKVR01	42	5022	4866	7/20/12	5/19/17	Contig	"Universiti Malaya, Kuala Lumpur"	SAMN02471410	GCA_000280595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/595/GCA_000280595.1_ASM28059v1	23045507	M139
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.53565	56.8	-	NCWC01	236	4512	4193	4/24/17	4/26/17	Contig	FDA/CFSAN	SAMN06712281	GCA_002107645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/645/GCA_002107645.1_ASM210764v1	-	MOD1-cr8
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.32006	50.5	-	FKYV01	85	5577	5161	5/19/16	2/25/17	Scaffold	SC	SAMEA2273741	GCA_900083935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/935/GCA_900083935.1_11983_8_79	-	2880STDY5682666
Enterobacter cloacae subsp. dissolvens	69219	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.00139	55	-	LEDR01	24	4841	4644	6/9/15	3/26/17	Contig	JCVI	SAMN03732712	GCA_001022575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/575/GCA_001022575.1_ASM102257v1	-	GN02534
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.39919	32.7	-	CUDO01	69	2335	2233	3/31/15	3/26/17	Contig	SC	SAMEA1035048	GCA_001237685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/685/GCA_001237685.1_7067_4_54	-	51-30
Propionibacterium acnes HL096PA2	765058	PRJNA40727	40727	Terrabacteria group	Actinobacteria	2.56043	60.1	-	ADWC01	19	2625	2489	3/31/11	3/30/17	Scaffold	WUGSC	SAMN02299429	GCA_000194845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/845/GCA_000194845.1_ASM19484v1	-	HL096PA2
Burkholderia sp. CCA53	1776288	PRJDB4729	320919	Proteobacteria	Betaproteobacteria	6.64789	67	-	BDDJ01	4	6343	6020	5/3/16	4/13/17	Contig	"Bioconversion Group, Research Institute for Sustainable Chemistry, Materials and Chemistry, National Institute of Advanced Industrial Science and Technology"	SAMD00051447	GCA_001685525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/525/GCA_001685525.1_ASM168552v1	-	CCA53
Campylobacter coli BIGS0011	1247736	PRJNA177352	177352	Proteobacteria	delta/epsilon subdivisions	1.60634	31.8	-	ANGV01	312	1723	1558	11/23/12	3/15/17	Contig	Swansea University	SAMN01795767	GCA_000314225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/225/GCA_000314225.1_ASM31422v1	23279096	BIGS0011
Lactobacillus plantarum	1590	PRJNA313343	313343	Terrabacteria group	Firmicutes	3.61517	44	-	LTCD01	121	3623	3370	3/25/16	3/28/17	Contig	National Centre for Cell Science Pune	SAMN04519660	GCA_001597605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/605/GCA_001597605.1_ASM159760v1	-	E2C5
Serratia marcescens	615	PRJNA336342	336342	Proteobacteria	Gammaproteobacteria	5.22646	59.6	-	MCNK01	29	4980	4818	1/30/17	3/29/17	Contig	Smithsonian Institution	SAMN05509266	GCA_001975745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/745/GCA_001975745.1_ASM197574v1	-	19F
Yersinia enterocolitica	630	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	4.55129	46.9	-	CPVF01	97	4306	4043	3/23/15	3/26/17	Scaffold	SC	SAMEA1486366	GCA_001086025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/025/GCA_001086025.1_8016_2_70	-	IP29228
Mycoplasma pneumoniae	2104	PRJNA291007	291007	Terrabacteria group	Tenericutes	0.82099	40.1	-	LHPY01	12	806	697	9/22/15	4/4/17	Scaffold	Centre for genomic regulation (CRG)	SAMN03897309	GCA_001296855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/855/GCA_001296855.1_ASM129685v1	26335586	Mympn_4807
Corynebacterium diphtheriae bv. intermedius	2014578	PRJNA313138	313138	Terrabacteria group	Actinobacteria	2.36747	53.6	-	LTAS01	37	2294	2126	6/20/17	6/26/17	Contig	Northumbria University	SAMN04515815	GCA_002200985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/985/GCA_002200985.1_ASM220098v1	-	CCUG 2706A
Lactobacillus johnsonii	33959	PRJNA317663	317663	Terrabacteria group	Firmicutes	2.15932	34.8756	chromosome:NZ_CP016400.1/CP016400.1; plasmid unnamed1:NZ_CP016630.1/CP016630.1	-	2	2070	1807	8/26/16	4/10/17	Complete Genome	Sichuan Agriculture University	SAMN04631277	GCA_001714745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/745/GCA_001714745.1_ASM171474v1	-	BS15
Brucella melitensis UK3/06	1169228	PRJNA173527	173527	Proteobacteria	Alphaproteobacteria	3.31001	57.2	-	AQKK01	3	3382	3165	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN00839724	GCA_000370825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/825/GCA_000370825.1_Bruc_meli_UK3_06_V1	-	UK3/06
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.98954	46.6	-	JTIE01	116	3073	2755	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196619	GCA_001656975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/975/GCA_001656975.1_ASM165697v1	-	Lrh25
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.38195	40.2	-	LQDI01	45	2269	2155	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366504	GCA_001930065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/065/GCA_001930065.1_ASM193006v1	-	2267PM
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.13027	41.2	-	CWBH01	79	2063	1889	6/24/15	3/26/17	Contig	SC	SAMEA1032837	GCA_001176425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/425/GCA_001176425.1_6903_4_63	-	EQUI0112
Stenotrophomonas maltophilia	40324	PRJNA381519	381519	Proteobacteria	Gammaproteobacteria	4.57313	66.6	-	NBYQ01	46	4227	4090	6/9/17	6/12/17	Contig	Curtin University	SAMN06678627	GCA_002189565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/565/GCA_002189565.1_ASM218956v1	-	SB275
Enterococcus faecium C621	1134816	PRJNA82021	82021	Terrabacteria group	Firmicutes	2.90872	37.7	-	AMBB01	213	2963	2815	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299491	GCA_000295395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/395/GCA_000295395.2_ASM29539v2	-	C621
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14504	52.4	-	CQLL01	79	2507	2179	3/23/15	4/10/17	Contig	SC	SAMEA1690369	GCA_001084125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/125/GCA_001084125.1_8727_8_64	-	GCGS160
Streptococcus mutans TCI-85	1074107	PRJNA71967	71967	Terrabacteria group	Firmicutes	1.92185	36.8	-	AGMW01	64	1933	1839	10/6/11	3/22/17	Contig	JCVI	SAMN02436442	GCA_000230145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/145/GCA_000230145.2_SMUT3-NEX_50-85	-	TCI-85
Enterococcus faecalis ERV41	1134791	PRJNA81971	81971	Terrabacteria group	Firmicutes	3.15213	37.3	-	ALZP01	129	3283	3112	8/27/12	3/23/17	Scaffold	Washington University	SAMN02299467	GCA_000294125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/125/GCA_000294125.1_ASM29412v1	-	ERV41
Clostridium botulinum	1491	PRJNA239370	239370	Terrabacteria group	Firmicutes	3.96674	28.1	-	JFGM01	341	3873	3427	7/18/14	3/24/17	Contig	Centers for Disease Control and Prevention	SAMN02664941	GCA_000730725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/725/GCA_000730725.1_ASM73072v1	25031122	CDC28023
Lactococcus lactis subsp. lactis KF147	684738	PRJNA41115	41115	Terrabacteria group	Firmicutes	2.63565	34.8644	chromosome:NC_013656.1/CP001834.1; plasmid pKF147A:NC_013657.1/CP001835.1	-	2	2623	2433	12/18/09	3/30/17	Complete Genome	"Center for Molecular and Biomolecular Informatics, Radboud University Medical Centre Nijmegen, the Netherlands"	SAMN02603087	GCA_000025045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/045/GCA_000025045.1_ASM2504v1	"1,803,982,520,348,260"	KF147
Bacillus subtilis gtP20b	903507	PRJNA53249	53249	Terrabacteria group	Firmicutes	4.20577	44	-	AEHM01	88	4228	4028	12/6/10	6/15/17	Contig	"University of Kiel, Germany and Zhejiang Universtiy, China."	SAMN02472163	GCA_000183765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/765/GCA_000183765.2_ASM18376v2	21183663	gtP20b
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.04458	45.3	-	LRTF01	73	4864	4575	4/4/16	3/19/17	Scaffold	Health Canada	SAMN04441022	GCA_001609155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/155/GCA_001609155.1_ASM160915v1	-	A3EZ799
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.90279	38	-	MLMF01	246	1958	1732	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297045	GCA_001867795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/795/GCA_001867795.1_ASM186779v1	27118061	AWRIB330
Xanthomonas oryzae pv. oryzae	64187	PRJNA269458	269458	Proteobacteria	Gammaproteobacteria	4.25203	63.9	-	JXGC01	433	4182	3417	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252543	GCA_001928175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/175/GCA_001928175.1_ASM192817v1	-	IXO221
Xanthomonas citri subsp. citri	611301	PRJEB7190	265968	Proteobacteria	Gammaproteobacteria	5.2352	64.7	-	CDAW01	358	4767	4364	11/10/14	4/2/17	Contig	CIRAD	SAMEA2827560	GCA_000825325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/325/GCA_000825325.1_XACS581	-	JS581
Brucella abortus F6/05-3	1160207	PRJNA173629	173629	Proteobacteria	Alphaproteobacteria	3.27899	57.2	-	AQJR01	13	3345	3105	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00811179	GCA_000370445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/445/GCA_000370445.1_Bruc_abor_F6_05-3_V1	-	F6/05-3
Francisella tularensis	263	PRJNA253522	253522	Proteobacteria	Gammaproteobacteria	1.86605	32.3	-	JPMR01	96	2022	1559	2/25/16	4/5/17	Contig	Swedish Defence Research Agency	SAMN02870491	GCA_001574655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/655/GCA_001574655.1_ASM157465v1	-	NO-17/2011
Clostridioides difficile CD41	1151264	PRJNA85701	85701	Terrabacteria group	Firmicutes	4.02443	28.4	-	AVGU01	34	3675	3549	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766615	GCA_000448985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/985/GCA_000448985.2_ASM44898v2	-	CD41
Vibrio cholerae CP1040(13)	991993	PRJNA63993	63993	Proteobacteria	Gammaproteobacteria	4.03394	47.5	-	ALDD01	105	3841	3609	10/4/12	3/23/17	Scaffold	Institute for Genome Sciences	SAMN00622026	GCA_000302985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/985/GCA_000302985.1_ASM30298v1	-	CP1040(13)
Bacillus thuringiensis	1428	PRJNA318332	318332	Terrabacteria group	Firmicutes	5.97641	35	-	LXLL01	91	6300	5850	10/12/16	4/5/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04819579	GCA_001757775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/775/GCA_001757775.1_ASM175777v1	-	GOE7
Chlamydia trachomatis F/SotonF3	1071764	PRJEA71089	71089	PVC group	Chlamydiae	1.05028	41.2636	chromosome:NC_020964.1/HE601806.1; plasmid pSotonF3:NC_020988.1/HE603234.1	-	2	973	908	3/13/12	3/23/17	Chromosome	Sanger Institute	SAMEA2272680	GCA_000318705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/705/GCA_000318705.1_ASM31870v1	22406642	F/SotonF3
Burkholderia pseudomallei	28450	PRJNA244537	244537	Proteobacteria	Betaproteobacteria	7.3042	67.9917	chromosome 1:NZ_CP008916.1/CP008916.1; chromosome 2:NZ_CP008917.1/CP008917.1	-	2	7509	7005	10/6/14	9/21/17	Chromosome	Los Alamos National Laboratory	SAMN02902623	GCA_000763555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/555/GCA_000763555.1_ASM76355v1	25414490	BGK
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.8394	67	-	MURL01	213	7487	6977	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001849	GCA_001991835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/835/GCA_001991835.1_ASM199183v1	-	VC13450
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.16674	38.5	-	NGPU01	152	2115	1916	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848384	GCA_002254095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/095/GCA_002254095.1_ASM225409v1	-	105w
Bacteroides fragilis str. S36L12	1339328	PRJNA206171	206171	FCB group	Bacteroidetes/Chlorobi group	6.18365	43.6	-	JGEP01	90	5785	5394	3/20/14	4/2/17	Contig	IGS	SAMN02363971	GCA_000599345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/345/GCA_000599345.1_ASM59934v1	-	S36L12
Shigella sonnei	624	PRJNA393761	393761	Proteobacteria	Gammaproteobacteria	4.6786	50.9	-	NMYB01	527	5311	4136	8/4/17	8/6/17	Contig	Christian Medical College	SAMN07340957	GCA_002242115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/115/GCA_002242115.1_ASM224211v1	-	FC3278
Legionella pneumophila subsp. pneumophila	91891	PRJNA239272	239272	Proteobacteria	Gammaproteobacteria	3.40793	38.2	-	JFIN01	48	3125	2981	3/7/14	3/24/17	Scaffold	Beijing Institute of Microbiology and Epidemiology	SAMN02650966	GCA_000586335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/335/GCA_000586335.1_ATCC_33155	-	ATCC 33155
Pseudomonas syringae CC1583	1357281	PRJNA211404	211404	Proteobacteria	Gammaproteobacteria	5.5072	59	-	AVEF02	308	5068	4817	8/20/13	3/24/17	Contig	University of Arizona	SAMN02471569	GCA_000452665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/665/GCA_000452665.2_CC1583_092313_2.0	24459267	CC1583
Streptococcus suis YS1	1214185	PRJNA171454	171454	Terrabacteria group	Firmicutes	2.03025	41.3	-	ALMG01	31	2043	1956	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469530	GCA_000441075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/075/GCA_000441075.1_version1	-	YS1
Streptococcus agalactiae GB00241	1154910	PRJNA86493	86493	Terrabacteria group	Firmicutes	2.14028	35.3	-	ALTE01	20	2244	2126	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991184	GCA_000288175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/175/GCA_000288175.1_ASM28817v1	-	GB00241
Acinetobacter baumannii	470	PRJEB1892	210261	Proteobacteria	Gammaproteobacteria	3.91625	38.9043	chromosome I:NZ_HG977522.1/HG977522.1; plasmid II:NZ_HG977523.1/HG977523.1; plasmid III:NZ_HG977524.1/HG977524.1; plasmid IV:NZ_HG977525.1/HG977525.1	CCCU01	4	3749	3455	1/1/15	3/16/17	Chromosome	URMITE	SAMEA3158456	GCA_000820665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/665/GCA_000820665.1_CLCgenomics	-	CS01
Lactococcus lactis subsp. lactis NCDO 2118	1117941	PRJNA196165	196165	Terrabacteria group	Firmicutes	2.59226	34.8623	chromosome:NZ_CP009054.1/CP009054.1; plasmid pNCDO2118:NZ_CP009055.1/CP009055.1	-	2	2577	2377	7/30/14	4/2/17	Complete Genome	Rede Paraense de genômica e proteômica	SAMN02471376	GCA_000478255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/255/GCA_000478255.2_ASM47825v2	25278529	NCDO 2118
Bifidobacterium longum subsp. longum EK5	1457185	PRJNA236799	236799	Terrabacteria group	Actinobacteria	2.23129	59.7	-	JNWC01	28	1927	1795	7/16/14	4/2/17	Scaffold	Pirogov Russian National Research Medical University	SAMN02862996	GCA_000730025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/025/GCA_000730025.1_ASM73002v1	-	EK5
Shigella flexneri	623	PRJNA315925	315925	Proteobacteria	Gammaproteobacteria	4.48611	50.7	-	LVJA01	393	5186	4189	5/20/16	3/5/17	Contig	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04570195	GCA_001649345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/345/GCA_001649345.1_ASM164934v1	-	SH4s08
Bacillus anthracis str. A0389	486623	PRJNA27917	27917	Terrabacteria group	Firmicutes	5.4204	35.1662	plasmid pXO1:NZ_ABLB01000067.1/ABLB01000067.1; plasmid pXO2:NZ_ABLB01000068.1/ABLB01000068.1	ABLB01	68	6059	5622	3/17/08	5/18/17	Contig	Los Alamos National Laboratory	SAMN02470266	GCA_000219895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/895/GCA_000219895.1_ASM21989v1	-	A0389
Pseudomonas putida JCM 18452	1295132	PRJDB837	243742	Proteobacteria	Gammaproteobacteria	6.28482	62	-	BBDB01	823	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000540	GCA_001312165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/165/GCA_001312165.1_ASM131216v1	-	JCM 18452
Leptospira interrogans serovar Pomona str. 2006006962	1291359	PRJNA188968	188968	Spirochaetes	Spirochaetia	4.56317	35	-	AOWV01	204	4182	3674	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920608	GCA_000343025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/025/GCA_000343025.1_CA_glsol038	-	2006006962
Streptococcus pyogenes ABC020026946	1439048	PRJNA233247	233247	Terrabacteria group	Firmicutes	1.82452	38.5	-	JJFP01	3	1854	1739	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567596	GCA_000629925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/925/GCA_000629925.1_Stre_pyog_ABC020026946_V1	-	ABC020026946
Lactobacillus sanfranciscensis TMW 1.1304	714313	PRJNA43579	43579	Terrabacteria group	Firmicutes	1.37577	34.8429	chromosome:NC_015978.1/CP002461.1; plasmid pLS1:NC_015979.1/CP002462.1; plasmid pLS2:NC_015980.1/CP002463.1	-	3	1456	1294	9/6/11	4/7/17	Complete Genome	"Lehrstuhl fuer technische Mikrobiologie, Technische Universitaet Muenchen"	SAMN02603515	GCA_000225325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/325/GCA_000225325.1_ASM22532v1	21995419	TMW 1.1304
Bacillus thuringiensis	1428	PRJNA311097	311097	Terrabacteria group	Firmicutes	6.3905	34.8215	chromosome:NZ_CP014282.1/CP014282.1; plasmid pBT1850007:NZ_CP014290.1/CP014290.1; plasmid pBT1850012:NZ_CP014288.1/CP014288.1; plasmid pBT1850042:NZ_CP014287.1/CP014287.1; plasmid pBT1850046:NZ_CP014289.1/CP014289.1; plasmid pBT1850054:NZ_CP014286.1/CP014286.1; plasmid pBT1850055:NZ_CP014285.1/CP014285.1; plasmid pBT1850294:NZ_CP014284.1/CP014284.1; plasmid pBT1850636:NZ_CP014283.1/CP014283.1	-	9	6639	6086	3/22/16	4/5/17	Complete Genome	"Institute of Plant Protection, Chinese Academy of Agricultural Sciences"	SAMN04469537	GCA_001595725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/725/GCA_001595725.1_ASM159572v1	-	Bt185
Streptococcus pneumoniae	1313	PRJNA229402	229402	Terrabacteria group	Firmicutes	2.13226	39.7	-	JFIY01	178	2268	2015	10/2/14	3/10/17	Scaffold	Harvard Medical School / Massachusetts Eye and Ear Infirmary	SAMN02641106	GCA_000762725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/725/GCA_000762725.1_Sp_3452.v1.0	-	ECC_3452
Helicobacter bilis	37372	PRJNA281203	281203	Proteobacteria	delta/epsilon subdivisions	2.6204	34.8	chromosome:NZ_CP019645.1/CP019645.1	-	1	2314	2102	2/15/17	4/6/17	Complete Genome	NHGRI/NIH	SAMN03485893	GCA_001999985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/985/GCA_001999985.1_ASM199998v1	-	AAQJH
Mycobacterium tuberculosis TRS16	1334062	PRJNA203174	203174	Terrabacteria group	Actinobacteria	4.41153	65.5	chromosome:NZ_CP009172.1/CP009172.1	-	1	4289	4077	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837636	GCA_001997725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/725/GCA_001997725.1_ASM199772v1	27261264	TRS16
Haemophilus influenzae	727	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.88155	38	-	JUZY01	123	1890	1754	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197816	GCA_001055485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/485/GCA_001055485.1_ASM105548v1	26230489	615_HINF
Mycobacterium avium subsp. paratuberculosis	1770	PRJNA290494	290494	Terrabacteria group	Actinobacteria	4.77286	69.3	-	LGSB01	90	4530	4282	10/27/16	4/5/17	Contig	Memorial University of Newfoundland	SAMN03892639	GCA_001855445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/445/GCA_001855445.1_ASM185544v1	-	NL 95B
Lactococcus lactis	1358	PRJNA284432	284432	Terrabacteria group	Firmicutes	2.39296	35.1	-	LDEK01	35	2400	2226	1/25/16	4/4/17	Contig	Geneva University Hospitals	SAMN03702540	GCA_001540895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/895/GCA_001540895.1_ASM154089v1	26713450	Ll1596
Bacillus cereus VDM022	1053247	PRJNA70461	70461	Terrabacteria group	Firmicutes	6.31247	35.6	-	AHFP01	17	6502	5973	8/15/12	6/15/17	Scaffold	Broad Institute	SAMN02596879	GCA_000290695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/695/GCA_000290695.1_Baci_cere_VDM022_V1	-	VDM022
Staphylococcus epidermidis	1282	PRJNA241149	241149	Terrabacteria group	Firmicutes	2.35374	32.3	-	JGVL01	102	2316	2159	5/6/14	3/24/17	Contig	Ghent University	SAMN02688504	GCA_000685135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/135/GCA_000685135.1_S._epi_ET-024	24874691	ET-024
Sulfolobus sp. A20	1891280	PRJNA339201	339201	TACK group	Crenarchaeota	2.68832	34.8	chromosome:NZ_CP017006.1/CP017006.1	-	1	2717	2593	9/6/16	4/13/17	Complete Genome	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN05582949	GCA_001719125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/125/GCA_001719125.1_ASM171912v1	-	A20
Yersinia pestis subsp. microtus bv. Caucasica	385966	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.56704	47.6	-	MTZY01	191	4412	4066	5/10/17	5/22/17	Scaffold	SRCAMB	SAMN04992968	GCA_002127365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/365/GCA_002127365.1_ASM212736v1	-	SCPM-O-B-7111
Pseudomonas fluorescens	294	PRJNA309993	309993	Proteobacteria	Gammaproteobacteria	5.97153	60.6	-	LRUN01	130	5450	5231	7/5/16	4/11/17	Contig	"University of California San Diego, Dorrestein Lab"	SAMN04444410	GCA_001679645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/645/GCA_001679645.1_ASM167964v1	-	BW11P2
Turicibacter sp. H121	1712675	PRJNA295105	295105	Terrabacteria group	Firmicutes	2.62203	34.8	chromosome:NZ_CP013476.1/CP013476.1	-	1	2509	2221	2/1/16	4/11/17	Complete Genome	Baylor College of Medicine	SAMN04166238	GCA_001543345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/345/GCA_001543345.1_ASM154334v1	27013036	H121
Candidatus Campbellbacteria bacterium GW2011_OD1_34_28	1618633	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.75263	34.8	chromosome:CP011215.1	-	1	743	739	6/19/15	9/21/17	Complete Genome	"Banfield Lab, University of California, Berkeley"	SAMN03319287	GCA_001029775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/775/GCA_001029775.1_ASM102977v1	-	-
Peptoniphilus sp. ING2-D1G	1912856	PRJEB6908	268806	Terrabacteria group	Firmicutes	1.60185	34.8	chromosome I:NZ_LM997412.1/LM997412.1	-	1	1588	1493	9/8/14	4/10/17	Complete Genome	CEBITEC	SAMEA2681676	GCA_000952975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/975/GCA_000952975.1_D1G	-	-
endosymbiont of Acanthamoeba sp. UWC8	86106	PRJNA192595	192595	Proteobacteria	Alphaproteobacteria	1.61528	34.8	chromosome:NZ_CP004403.1/CP004403.1	-	1	1562	1494	7/17/14	9/10/17	Complete Genome	"Department of Biology, University of Virginia"	SAMN03081459	GCA_000730245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/245/GCA_000730245.1_ASM73024v1	25103769	-
Hydrogenobaculum sp. SN	547146	PRJNA39709	39709	Aquificae	Aquificae	1.55293	34.8	chromosome:NC_020814.1/CP004390.1	-	1	1652	1578	3/25/13	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN02232032	GCA_000348765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/765/GCA_000348765.2_ASM34876v2	23435891	SN
Hydrogenobaculum sp. HO	547144	PRJNA41741	41741	Aquificae	Aquificae	1.55293	34.8	chromosome:NC_020411.1/CP004347.1	-	1	1651	1570	2/26/13	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN02232031	GCA_000341855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/855/GCA_000341855.1_ASM34185v1	23435891	HO
Pseudomonas fluorescens	294	PRJNA357271	357271	Proteobacteria	Gammaproteobacteria	6.64925	59.5	-	MRXZ01	75	6261	5959	12/19/16	4/6/17	Contig	Universite Laval	SAMN06140193	GCA_001908925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/925/GCA_001908925.1_PSEUfluor_ML11A_v1.0	-	ML11A
Yersinia pestis subsp. microtus bv. Caucasica	385966	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.55862	47.6	-	MTZX01	188	4392	4056	5/10/17	5/22/17	Scaffold	SRCAMB	SAMN04992974	GCA_002127375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/375/GCA_002127375.1_ASM212737v1	-	SCPM-O-B-6994
Hydrogenobaculum sp. SHO	547145	PRJNA53951	53951	Aquificae	Aquificae	1.55261	34.8	chromosome:NC_015587.1/CP002809.1	-	1	1651	1579	5/26/11	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN02769645	GCA_000215065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/065/GCA_000215065.1_ASM21506v1	23435891	SHO
Staphylococcus epidermidis VCU111	904331	PRJNA53745	53745	Terrabacteria group	Firmicutes	2.48709	32	-	JHUB01	73	2495	2353	6/3/14	3/24/17	Contig	J. Craig Venter Institute	SAMN00117446	GCA_000697805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/697/805/GCA_000697805.1_gsevcu111v01	-	VCU111
Bacillus cereus VD200	1053244	PRJNA70455	70455	Terrabacteria group	Firmicutes	6.27422	35.3	-	AHFM01	14	6503	5941	8/15/12	5/18/17	Scaffold	Broad Institute	SAMN02596876	GCA_000290715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/715/GCA_000290715.1_Baci_cere_VD200_V1	-	VD200
Lactococcus lactis subsp. cremoris NBRC 100676	1348655	PRJDB1321	231378	Terrabacteria group	Firmicutes	2.34409	35.6	-	BCVK01	122	2422	2072	2/27/16	4/5/17	Contig	National Institute of Technology and Evaluation	SAMD00046910	GCA_001591705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/705/GCA_001591705.1_ASM159170v1	-	NBRC 100676
Mycobacterium avium subsp. paratuberculosis	1770	PRJNA290494	290494	Terrabacteria group	Actinobacteria	4.77427	69.3	-	LGSC01	97	4531	4272	10/27/16	4/5/17	Contig	Memorial University of Newfoundland	SAMN03892640	GCA_001855455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/455/GCA_001855455.1_ASM185545v1	-	NL 95E
Haemophilus influenzae	727	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.94695	39.5	-	JVRW01	38	1894	1766	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197350	GCA_001055565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/565/GCA_001055565.1_ASM105556v1	26230489	159_HINF
Mycobacterium tuberculosis TRS17	1334063	PRJNA203175	203175	Terrabacteria group	Actinobacteria	4.41153	65.5	chromosome:NZ_CP009173.1/CP009173.1	-	1	4303	4097	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837637	GCA_001997775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/775/GCA_001997775.1_ASM199777v1	27261264	TRS17
Hydrogenobaculum sp. 3684	547143	PRJNA51769	51769	Aquificae	Aquificae	1.55278	34.8	chromosome:NC_015557.1/CP002726.1	-	1	1651	1578	5/17/11	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN02769644	GCA_000213785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/785/GCA_000213785.1_ASM21378v1	23435891	3684
Streptococcus pneumoniae	1313	PRJNA229402	229402	Terrabacteria group	Firmicutes	2.13308	39.5	-	JFJB01	96	2282	2008	10/2/14	3/10/17	Scaffold	Harvard Medical School / Massachusetts Eye and Ear Infirmary	SAMN02641109	GCA_000762745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/745/GCA_000762745.1_Sp_3507.v1.0	-	ECC_3507
Lactobacillus johnsonii DPC 6026	909954	PRJNA56053	56053	Terrabacteria group	Firmicutes	1.96634	34.8	chromosome:NC_017477.1/CP002464.1	-	1	1900	1773	4/20/11	3/30/17	Complete Genome	"Teagasc, Food research centre, Moorepark, Fermoy, Co. Cork, Ireland"	SAMN02603892	GCA_000204985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/985/GCA_000204985.1_ASM20498v1	21533100	DPC 6026
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.20717	51.6	chromosome:NZ_CP016880.1/CP016880.1	-	1	2568	2214	8/11/16	3/21/17	Chromosome	Centers for Disease Control and Prevention	SAMN04883366	GCA_001703675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/703/675/GCA_001703675.1_ASM170367v1	-	M07165
Streptococcus pyogenes ABC020025676	1439042	PRJNA233245	233245	Terrabacteria group	Firmicutes	1.89994	38.6	-	JJFQ01	2	1986	1845	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567594	GCA_000629945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/945/GCA_000629945.1_Stre_pyog_ABC020025676_V1	-	ABC020025676
Leptospira interrogans serovar Copenhageni str. Fiocruz LV237	1291324	PRJNA188988	188988	Spirochaetes	Spirochaetia	4.61781	35	-	AOWC01	136	4113	3759	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920569	GCA_000343085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/085/GCA_000343085.1_CA_glsol093	-	Fiocruz LV237
Pseudomonas putida JCM 18798	1295133	PRJDB838	243743	Proteobacteria	Gammaproteobacteria	6.57759	61.6	-	BBDC01	924	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000541	GCA_001312185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/185/GCA_001312185.1_ASM131218v1	-	JCM 18798
Bacillus anthracis str. Heroin Ba4599	1081943	PRJNA72893	72893	Terrabacteria group	Firmicutes	5.46838	35.1	-	AGQP01	46	6145	5751	7/11/12	5/18/17	Contig	"Northern Arizona University, USA"	SAMN02470707	GCA_000278385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/385/GCA_000278385.1_ASM27838v1	22840345	Heroin Ba4599
Shigella flexneri	623	PRJNA315925	315925	Proteobacteria	Gammaproteobacteria	4.71518	50.5	-	LVJB01	507	5459	4286	5/20/16	8/8/17	Contig	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04570196	GCA_001649355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/355/GCA_001649355.1_ASM164935v1	-	SH4s09
Bifidobacterium longum subsp. longum 17-1B	1350473	PRJNA209583	209583	Terrabacteria group	Actinobacteria	2.4672	60.2	-	JNVZ01	20	2126	1983	7/16/14	4/2/17	Scaffold	Pirogov Russian National Research Medical University	SAMN02862993	GCA_000730035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/035/GCA_000730035.1_ASM73003v1	-	17-1B
Hydrogenobaculum sp. Y04AAS1	380749	PRJNA18891	18891	Aquificae	Aquificae	1.55951	34.8	chromosome:NC_011126.1/CP001130.1	-	1	1666	1597	8/6/08	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598419	GCA_000020785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/785/GCA_000020785.1_ASM2078v1	-	Y04AAS1
Acinetobacter baumannii	470	PRJEB1893	210262	Proteobacteria	Gammaproteobacteria	3.92491	38.9029	chromosome I:NZ_HG977526.1/HG977526.1; plasmid II:NZ_HG977527.1/HG977527.1; plasmid III:NZ_HG977528.1/HG977528.1; plasmid IV:NZ_HG977529.1/HG977529.1	CCCV01	4	7478	6986	1/1/15	3/16/17	Chromosome	URMITE	SAMEA3158506	GCA_000820685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/685/GCA_000820685.1_CLCgenomics	-	CR17
Streptococcus agalactiae GB00226	1154909	PRJNA86491	86491	Terrabacteria group	Firmicutes	2.10897	35.3	-	ALTD01	25	2170	2043	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991185	GCA_000288195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/195/GCA_000288195.1_ASM28819v1	-	GB00226
Streptococcus suis YS21	1214192	PRJNA171455	171455	Terrabacteria group	Firmicutes	2.46878	41.3	-	ALMH01	139	2449	2263	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469541	GCA_000441095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/095/GCA_000441095.1_version1	-	YS21
Pseudomonas syringae CC1559	1357280	PRJNA211402	211402	Proteobacteria	Gammaproteobacteria	5.85835	58.9	-	AVEG02	365	5417	5126	8/20/13	3/24/17	Contig	University of Arizona	SAMN02471570	GCA_000452685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/685/GCA_000452685.2_CC1559_092313_2.0	24459267	CC1559
Legionella pneumophila subsp. pneumophila	91891	PRJNA239272	239272	Proteobacteria	Gammaproteobacteria	3.32191	38.4	-	JFIO01	17	2953	2818	3/7/14	3/24/17	Scaffold	Beijing Institute of Microbiology and Epidemiology	SAMN02650965	GCA_000586355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/355/GCA_000586355.1_ATCC_33154	-	ATCC 33154
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.10158	50.4	-	NPZH01	189	5506	5014	8/11/17	8/15/17	Contig	JCVI	SAMN07450617	GCA_002246085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/085/GCA_002246085.1_ASM224608v1	-	ECCTRSRTH02
Bacteroides fragilis str. S38L5	1339332	PRJNA206175	206175	FCB group	Bacteroidetes/Chlorobi group	4.97199	43.3	-	JGER01	83	4357	4096	3/20/14	4/2/17	Contig	IGS	SAMN02315070	GCA_000599365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/365/GCA_000599365.1_ASM59936v1	-	S38L5
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.19107	38.5	-	NGPX01	100	2159	1953	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848381	GCA_002254105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/105/GCA_002254105.1_ASM225410v1	-	105n
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.9739	67.2	-	MURN01	202	7579	7138	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001851	GCA_001991845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/845/GCA_001991845.1_ASM199184v1	-	VC14543
Burkholderia pseudomallei MSHR2243	1435994	PRJNA231528	231528	Proteobacteria	Betaproteobacteria	7.14519	68.2343	chromosome 1:NZ_CP009270.1/CP009270.1; chromosome 2:NZ_CP009269.1/CP009269.1	-	2	7357	6797	10/31/14	3/25/17	Chromosome	Los Alamos National Laboratory	SAMN03004264	GCA_000770415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/415/GCA_000770415.1_ASM77041v1	-	MSHR2243
Chlamydia trachomatis G/SotonG1	1071765	PRJEA71091	71091	PVC group	Chlamydiae	1.04964	41.2644	chromosome:NC_020941.1/HE601807.1; plasmid pSotonG1:NC_020961.1/HE603235.1	-	2	975	911	3/13/12	3/24/17	Chromosome	Sanger Institute	SAMEA2271946	GCA_000318745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/745/GCA_000318745.1_ASM31874v1	22406642	G/SotonG1
Bacillus thuringiensis	1428	PRJNA325400	325400	Terrabacteria group	Firmicutes	5.81454	34.8	-	LZRA01	100	6081	5801	11/18/16	4/6/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05231664	GCA_001883875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/875/GCA_001883875.1_ASM188387v1	-	B-2012
Vibrio cholerae HC-57A1	991975	PRJNA63957	63957	Proteobacteria	Gammaproteobacteria	3.93443	47.8	-	ALDY01	125	3746	3464	10/4/12	3/23/17	Scaffold	Institute for Genome Sciences	SAMN00622031	GCA_000303005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/005/GCA_000303005.1_ASM30300v1	-	HC-57A1
Clostridioides difficile CD42	1151265	PRJNA85703	85703	Terrabacteria group	Firmicutes	4.02907	28.5	-	AVGV01	245	3750	3592	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766616	GCA_000449005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/005/GCA_000449005.2_ASM44900v2	-	CD42
Francisella tularensis	263	PRJNA253522	253522	Proteobacteria	Gammaproteobacteria	1.86672	32.3	-	JPMS01	95	2022	1557	2/25/16	4/4/17	Contig	Swedish Defence Research Agency	SAMN02870492	GCA_001574675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/675/GCA_001574675.1_ASM157467v1	-	NO-18/2011
Brucella abortus F6/05-4	1160188	PRJNA173597	173597	Proteobacteria	Alphaproteobacteria	3.2807	57.2	-	AQJS01	13	3350	3115	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00811180	GCA_000370465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/465/GCA_000370465.1_Bruc_abor_F6_05-4_V1	-	F6/05-4
Xanthomonas citri subsp. citri	611301	PRJEB7191	265969	Proteobacteria	Gammaproteobacteria	5.34108	64.7	-	CDAT01	432	4969	4449	11/10/14	4/2/17	Contig	CIRAD	SAMEA2827559	GCA_000825345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/345/GCA_000825345.1_XAC3607	-	NCPPB 3607
Xanthomonas oryzae pv. oryzae	64187	PRJNA269460	269460	Proteobacteria	Gammaproteobacteria	4.3099	63.9	-	JXGE01	447	4323	3438	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252544	GCA_001928185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/185/GCA_001928185.1_ASM192818v1	-	IXO278
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.92423	37.8	-	MLMH01	539	2022	1707	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297047	GCA_001867805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/805/GCA_001867805.1_ASM186780v1	27118061	AWRIB332
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.0669	45.2	-	LRTI01	65	4888	4596	4/4/16	3/19/17	Scaffold	Health Canada	SAMN04441024	GCA_001609185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/185/GCA_001609185.1_ASM160918v1	-	A1EZ952
Bacillus subtilis subsp. subtilis str. SC-8	1089443	PRJNA73499	73499	Terrabacteria group	Firmicutes	4.13882	43.5	-	AGFW01	17	4320	4200	10/13/11	5/18/17	Contig	Chung-Ang University	SAMN02469591	GCA_000230755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/755/GCA_000230755.2_ASM23075v2	22207744	SC-8
Lactobacillus acidophilus	1579	PRJNA340059	340059	Terrabacteria group	Firmicutes	1.9912	34.7	chromosome:NZ_CP017062.1/CP017062.1	-	1	1978	1863	9/5/17	9/7/17	Complete Genome	Korea Food Research Institute	SAMN05631052	GCA_002286215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/215/GCA_002286215.1_ASM228621v1	-	LA1
Clostridium botulinum	1491	PRJNA239370	239370	Terrabacteria group	Firmicutes	3.68473	28.5	-	JFGL01	869	3599	3073	7/18/14	3/24/17	Contig	Centers for Disease Control and Prevention	SAMN02664942	GCA_000730735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/735/GCA_000730735.1_ASM73073v1	25031122	CDC33700
Enterococcus faecalis ERV62	1134792	PRJNA81973	81973	Terrabacteria group	Firmicutes	3.11751	37.3	-	ALZQ01	76	3227	3074	8/27/12	3/27/17	Scaffold	Washington University	SAMN02299468	GCA_000294145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/145/GCA_000294145.2_ASM29414v2	-	ERV62
Streptococcus mutans TCI-86	1074108	PRJNA71969	71969	Terrabacteria group	Firmicutes	1.82001	37	-	AGMX01	128	1846	1707	10/6/11	3/22/17	Contig	JCVI	SAMN02436525	GCA_000230165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/165/GCA_000230165.2_SMUT3-NEX_57-86	-	TCI-86
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14439	52.4	-	CQLS01	79	2496	2183	3/23/15	4/10/17	Contig	SC	SAMEA1690474	GCA_001084345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/345/GCA_001084345.1_8289_2_59	-	GCGS059
Enterococcus faecium E417	1134817	PRJNA82023	82023	Terrabacteria group	Firmicutes	2.88466	37.8	-	AMBA01	176	2984	2831	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299492	GCA_000295415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/415/GCA_000295415.2_ASM29541v2	-	E417
Stenotrophomonas maltophilia	40324	PRJNA390523	390523	Proteobacteria	Gammaproteobacteria	4.82581	66.2	-	NIVV01	169	4501	4328	6/22/17	6/24/17	Contig	JCVI	SAMN07237140	GCA_002205155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/155/GCA_002205155.1_ASM220515v1	-	M16356
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12598	41.2	-	CWDH01	70	2054	1877	6/23/15	3/26/17	Contig	SC	SAMEA1032839	GCA_001176445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/445/GCA_001176445.1_6903_6_7	-	EQUI0152
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.29301	40.3	-	LQDL01	29	2154	2056	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366507	GCA_001930115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/115/GCA_001930115.1_ASM193011v1	-	2297PM
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.95566	46.7	-	JTII01	71	2982	2802	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196623	GCA_001656995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/995/GCA_001656995.1_ASM165699v1	-	Lrh21
Brucella melitensis UK31/99	1169229	PRJNA173514	173514	Proteobacteria	Alphaproteobacteria	3.3238	57.2	-	AQKL01	4	3395	3133	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN00839711	GCA_000370845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/845/GCA_000370845.1_Bruc_meli_UK31_99_V1	-	UK31/99
Lactobacillus acidophilus	1579	PRJNA394684	394684	Terrabacteria group	Firmicutes	1.99191	34.7	chromosome:NZ_CP022449.1/CP022449.1	-	1	1977	1852	7/24/17	7/28/17	Complete Genome	Naval Research Laboratory	SAMN07357495	GCA_002224305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/305/GCA_002224305.1_ASM222430v1	-	ATCC 53544
Corynebacterium diphtheriae bv. mitis	1806053	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.45721	53.5	-	LSZF01	27	2359	2197	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496969	GCA_002200995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/995/GCA_002200995.1_S42	-	1438
Mycoplasma pneumoniae	2104	PRJNA291007	291007	Terrabacteria group	Tenericutes	0.823745	40.1	-	LHQH01	13	806	700	9/22/15	4/4/17	Scaffold	Centre for genomic regulation (CRG)	SAMN03897318	GCA_001296885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/885/GCA_001296885.1_ASM129688v1	26335586	Mympn_6250
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.45846	46.9	-	CQBI01	119	4209	3940	3/22/15	3/26/17	Scaffold	SC	SAMEA980221	GCA_001086365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/365/GCA_001086365.1_4976_3_8	-	ERL072344
Serratia marcescens	615	PRJNA374552	374552	Proteobacteria	Gammaproteobacteria	5.308	59.4	-	MVGA01	17	5183	4999	3/15/17	3/17/17	Contig	University of Cambridge	SAMN06328786	GCA_002029205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/205/GCA_002029205.1_ASM202920v1	-	CAPREX_SY13
Lactobacillus plantarum	1590	PRJNA314115	314115	Terrabacteria group	Firmicutes	3.45279	44.3	-	LUXL01	37	3398	3074	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04528995	GCA_001633245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/245/GCA_001633245.1_ASM163324v1	-	ER
Campylobacter coli BIGS0012	1247737	PRJNA177352	177352	Proteobacteria	delta/epsilon subdivisions	1.55471	32	-	ANGW01	282	1670	1483	11/23/12	3/15/17	Contig	Swansea University	SAMN01795768	GCA_000314245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/245/GCA_000314245.1_ASM31424v1	23279096	BIGS0012
Burkholderia sp. SRS-W-2-2016	1926878	PRJNA356728	356728	Proteobacteria	Betaproteobacteria	7.79411	64.4	-	MSDV01	109	6807	6551	1/4/17	4/16/17	Contig	Florida A&M University	SAMN06141630	GCA_001931485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/485/GCA_001931485.1_ASM193148v1	-	SRS-W-2-2016
Propionibacterium acnes HL103PA1	765061	PRJNA40721	40721	Terrabacteria group	Actinobacteria	2.47684	60.1	-	ADWF01	9	2473	2262	3/31/11	3/30/17	Scaffold	WUGSC	SAMN02299428	GCA_000194865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/865/GCA_000194865.1_ASM19486v1	-	HL103PA1
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.67365	32.6	-	CUCL01	73	2678	2546	3/31/15	3/26/17	Contig	SC	SAMEA1035102	GCA_001238305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/305/GCA_001238305.1_7067_4_28	-	25-44
Enterobacter cloacae subsp. cloacae	336306	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.26566	54.5	-	LEDL01	81	5149	4943	6/9/15	3/26/17	Contig	JCVI	SAMN03732719	GCA_001022695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/695/GCA_001022695.1_ASM102269v1	-	GN02616
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.21752	55	-	FKYR01	72	6102	5815	5/19/16	2/21/17	Scaffold	SC	SAMEA2273540	GCA_900083945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/945/GCA_900083945.1_12045_6_10	-	2880STDY5682455
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.56455	56.9	-	NCWE01	114	4490	4256	4/24/17	4/26/17	Contig	FDA/CFSAN	SAMN06712279	GCA_002107665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/665/GCA_002107665.1_ASM210766v1	-	MOD1-nm1241
Mycobacterium abscessus M152	1176125	PRJNA159789	159789	Terrabacteria group	Actinobacteria	4.91167	64.2	-	AKVT01	45	4905	4749	7/20/12	5/19/17	Contig	"Universiti Malaya, Kuala Lumpur"	SAMN02471411	GCA_000280615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/615/GCA_000280615.1_ASM28061v1	23144407	M152
Vibrio sp. JCM 18904	1298599	PRJDB875	243759	Proteobacteria	Gammaproteobacteria	5.27018	44.6	-	BBDY01	70	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016823	GCA_001315185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/185/GCA_001315185.1_ASM131518v1	-	JCM 18904
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.37389	63	-	DCTA01	35	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451560	GCA_002325895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/895/GCA_002325895.1_ASM232589v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.24706	66.9	-	LOZE01	143	7575	7087	1/22/16	7/12/17	Contig	Northern Arizona University	SAMN03449314	GCA_001527365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/365/GCA_001527365.1_ASM152736v1	-	MSMB2058
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	4.04501	38.8	-	MDJA01	92	3989	3785	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022850	GCA_001706525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/525/GCA_001706525.1_ASM170652v1	-	-
Citrobacter freundii	546	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.25016	51.6	-	JUPT01	254	5252	5002	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03198081	GCA_001058675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/675/GCA_001058675.1_ASM105867v1	26230489	874_CKOS
Enterobacter hormaechei subsp. hormaechei	301105	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.99664	54.9	-	JZZP01	97	4929	4674	3/19/15	3/25/17	Contig	JCVI	SAMN03283631	GCA_000957895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/895/GCA_000957895.1_ASM95789v1	-	35027
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.25202	54.8	-	LPOM01	69	5263	5033	12/21/15	4/6/17	Contig	JCVI	SAMN04252948	GCA_001473095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/095/GCA_001473095.1_SMART_1060.v1	-	SMART_1060
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.963	64.1	-	FVIF01	16	4914	4757	3/10/17	3/18/17	Scaffold	SC	SAMEA2275649	GCA_900133795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/795/GCA_900133795.1_12163_1_5	-	927
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.42655	66.8	-	LPGR01	96	7825	7439	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449517	GCA_001530905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/905/GCA_001530905.1_ASM153090v1	-	MSMB1819WGS
Pseudomonas sp. HMSC058C05	1715145	PRJNA296273	296273	Proteobacteria	Gammaproteobacteria	6.96793	65.9	-	LTJC01	166	6739	6435	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477523	GCA_001809775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/775/GCA_001809775.1_ASM180977v1	-	HMSC058C05
Streptomyces sp. CNQ-525	418855	PRJNA187125	187125	Terrabacteria group	Actinobacteria	8.64522	73.4	-	JNID01	76	7306	6979	6/11/14	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841146	GCA_000701285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/285/GCA_000701285.1_ASM70128v1	-	CNQ-525
Bacillus sp. SG-1	161544	PRJNA19283	19283	Terrabacteria group	Firmicutes	3.94896	42.1	-	ABCF01	186	3991	3733	6/15/07	4/17/17	Contig	J. Craig Venter Institute	SAMN02436121	GCA_000181495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/181/495/GCA_000181495.1_ASM18149v1	-	SG-1
Acinetobacter sp. 272263	1310639	PRJNA194715	194715	Proteobacteria	Gammaproteobacteria	3.35659	41.6	-	JEWX01	158	3303	3075	2/25/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02380520	GCA_000581215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/215/GCA_000581215.1_ASM58121v1	-	272263
Sphingomonas sp. CCH19-C6	1768783	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	3.46317	66.7	-	LSKD01	84	3360	3202	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299480	GCA_001556975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/975/GCA_001556975.1_ASM155697v1	-	CCH19-C6
Clostridium sp. CAG:590	1262825	PRJEB948	206847	Terrabacteria group	Firmicutes	2.63756	40.6	-	CAXF01	142	2376	2354	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138444	GCA_000431135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/135/GCA_000431135.1_MGS590	-	-
Rhodococcus sp. 06-418-5	2022507	PRJNA395383	395383	Terrabacteria group	Actinobacteria	6.05948	64.7	-	NOYE01	39	5749	5597	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376377	GCA_002258285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/285/GCA_002258285.1_ASM225828v1	-	06-418-5
Enterobacter cloacae complex sp. 35699	1619248	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.20123	55	-	JZYX01	154	5314	4999	3/19/15	4/10/17	Contig	JCVI	SAMN03283666	GCA_000958085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/085/GCA_000958085.1_ASM95808v1	-	35699
Staphylococcus sp. HMSC068H08	1739498	PRJNA300148	300148	Terrabacteria group	Firmicutes	2.35358	32.6	-	LTTY01	55	2299	2153	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480415	GCA_001814895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/895/GCA_001814895.1_ASM181489v1	-	HMSC068H08
Corynebacterium sp. HMSC074C01	1739482	PRJNA300132	300132	Terrabacteria group	Actinobacteria	2.69314	60.8	-	LTUN01	75	2536	2399	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480403	GCA_001814605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/605/GCA_001814605.1_ASM181460v1	-	HMSC074C01
Arthrobacter sp. UNCCL28	1502752	PRJEB16130	348610	Terrabacteria group	Actinobacteria	4.80717	62.7	-	FMWE01	21	4405	4212	10/17/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02799638	GCA_900102805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/805/GCA_900102805.1_IMG-taxon_2593339130_annotated_assembly	-	UNCCL28
Streptococcus sp. HMSC034A12	1715089	PRJNA296217	296217	Terrabacteria group	Firmicutes	1.86948	39	-	LTSD01	83	1892	1660	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498604	GCA_001835825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/825/GCA_001835825.1_ASM183582v1	-	HMSC034A12
Mycobacterium sp. 852002-51961_SCH5331710	1834105	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.55279	67.2	-	LZSQ01	135	5380	5191	6/17/16	4/13/17	Contig	JCVI	SAMN04691954	GCA_001665535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/535/GCA_001665535.1_ASM166553v1	-	852002-51961_SCH5331710
Prevotella sp. CAG:279	1262924	PRJEB809	206791	FCB group	Bacteroidetes/Chlorobi group	2.42402	50.1	-	CBIX01	98	2117	2076	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138774	GCA_000437795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/795/GCA_000437795.1_MGS279	-	-
Paenibacillus sp. FSL A5-0031	1920420	PRJNA343020	343020	Terrabacteria group	Firmicutes	7.84683	44.3	-	MRTD01	87	6816	6675	1/18/17	4/17/17	Contig	Cornell University	SAMN05929603	GCA_001956295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/295/GCA_001956295.1_ASM195629v1	-	FSL A5-0031
uncultured Ruminococcus sp.	165186	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.99158	42.3	-	FMEA01	39	2815	2762	8/16/16	8/16/16	Scaffold	SC	SAMEA3545300	GCA_900066405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/405/GCA_900066405.1_13414_6_76	-	-
uncultured Bacteroides sp.	162156	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	4.18663	46.4	-	FMFI01	114	3584	3508	8/16/16	8/16/16	Scaffold	SC	SAMEA3545311	GCA_900066455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/455/GCA_900066455.1_13470_2_64	-	-
Prochlorococcus sp. scB241_528N8	1471458	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.37844	31.3	-	JFLI01	332	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671329	GCA_000634775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/775/GCA_000634775.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. P0078	1895631	PRJNA341049	341049	Proteobacteria	delta/epsilon subdivisions	1.62388	34.2	-	MJLJ01	24	1664	1600	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687069	GCA_002139075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/075/GCA_002139075.1_ASM213907v1	28854596	P0078
Rhizobium sp. YR528	1500258	PRJNA247573	247573	Proteobacteria	Alphaproteobacteria	6.18059	61.4	-	JUHJ01	28	5960	5761	12/9/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02787161	GCA_000799775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/799/775/GCA_000799775.1_ASM79977v1	-	YR528
Mesorhizobium sp. LCM 4577	1848288	PRJNA321042	321042	Proteobacteria	Alphaproteobacteria	7.0198	63.8	-	MDDU01	56	6793	6512	10/26/16	4/13/17	Contig	University of New Hampshire	SAMN04964170	GCA_001854795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/795/GCA_001854795.1_ASM185479v1	-	LCM 4577
Microbacterium sp. 14-71-5	1970400	PRJNA379596	379596	Terrabacteria group	Actinobacteria	3.71194	71.3	-	NCKF01	1525	4377	4118	8/16/17	8/16/17	Contig	None	SAMN06622197	GCA_002257395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/395/GCA_002257395.1_ASM225739v1	-	-
Bacillus velezensis	492670	PRJNA395369	395369	Terrabacteria group	Firmicutes	3.95507	46.3	-	NPCK01	77	3936	3789	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372712	GCA_002272465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/465/GCA_002272465.1_assembly-7586-G_v1	-	7586-G
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.80227	57	-	FXRB01	98	5868	5517	4/28/17	5/6/17	Scaffold	SC	SAMEA2609515	GCA_900181795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/795/GCA_900181795.1_14936_2_44	-	3189STDY5864897
Staphylococcus argenteus	985002	PRJNA317279	317279	Terrabacteria group	Firmicutes	2.77375	32.3	-	LWAP01	144	2775	2565	1/23/17	4/6/17	Scaffold	Shanghai Jiao Tong University	SAMN04604744	GCA_001969705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/705/GCA_001969705.1_ASM196970v1	-	SJTU F21164
Xanthomonas phaseoli pv. phaseoli	317013	PRJNA270012	270012	Proteobacteria	Gammaproteobacteria	5.29769	64.8	-	JWTI02	183	4774	4250	12/26/14	4/11/17	Contig	University of Exeter	SAMN03262510	GCA_000808735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/735/GCA_000808735.2_NCPPB1138v2	26500625	NCPPB 1138
Xanthomonas phaseoli pv. phaseoli	317013	PRJNA268142	268142	Proteobacteria	Gammaproteobacteria	5.19165	64.6	-	JTJF02	288	4722	4124	12/1/14	4/3/17	Contig	University of Exeter	SAMN03203484	GCA_000818835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/835/GCA_000818835.2_NCPPB556v2	26500625	NCPPB 556
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.93616	32.3	-	FQKI01	30	2992	2809	11/23/16	4/5/17	Scaffold	SC	SAMEA3449082	GCA_900126615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/615/GCA_900126615.1_17175_3_26	-	3688STDY6125074
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.80447	57	-	FXRD01	108	5881	5515	4/28/17	5/6/17	Scaffold	SC	SAMEA2609516	GCA_900181845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/845/GCA_900181845.1_14936_2_45	-	3189STDY5864898
Bacillus velezensis	492670	PRJNA395369	395369	Terrabacteria group	Firmicutes	3.93941	46.3	-	NPBZ01	95	3906	3752	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372700	GCA_002272565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/565/GCA_002272565.1_assembly-7537-G2_v1	-	7537-G2
Microbacterium sp. 13-71-7	1970399	PRJNA379596	379596	Terrabacteria group	Actinobacteria	4.1997	70.6	-	NCKN01	426	4160	4010	8/16/17	8/16/17	Contig	None	SAMN06622189	GCA_002257455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/455/GCA_002257455.1_ASM225745v1	-	-
Mesorhizobium sp. LCM 4576	1848289	PRJNA321043	321043	Proteobacteria	Alphaproteobacteria	7.24153	63.6	-	MDDT01	89	7019	6715	10/26/16	4/13/17	Contig	University of New Hampshire	SAMN04964171	GCA_001854815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/815/GCA_001854815.1_ASM185481v1	-	LCM 4576
Rhizobium sp. Leaf321	1736335	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.92208	60.3	-	LMOF01	11	4705	4568	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151725	GCA_001423215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/215/GCA_001423215.1_Leaf321	26633631	Leaf321
Campylobacter sp. P0124	1895632	PRJNA341050	341050	Proteobacteria	delta/epsilon subdivisions	1.59923	34.2	-	MJLK01	22	1657	1588	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687070	GCA_002139105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/105/GCA_002139105.1_ASM213910v1	28854596	P0124
Prochlorococcus sp. scB241_529J15	1471466	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.60105	31.2	-	JFLQ01	180	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671337	GCA_000634795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/795/GCA_000634795.1_De_novo_assembly_of_single-cell_genomes	24763590	-
uncultured Bacteroides sp.	162156	PRJEB10915	297013	FCB group	Bacteroidetes/Chlorobi group	7.30122	43.2	-	FMFT01	79	6019	5948	8/16/16	8/16/16	Scaffold	SC	SAMEA3545363	GCA_900066665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/665/GCA_900066665.1_14207_7_23	-	-
uncultured Ruminococcus sp.	165186	PRJEB10915	297013	Terrabacteria group	Firmicutes	5.84172	47.1	-	FMFQ01	135	5640	5546	8/16/16	8/16/16	Scaffold	SC	SAMEA3545352	GCA_900066605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/605/GCA_900066605.1_14207_7_11	-	-
Paenibacillus sp. FSL R7-0273	1536772	PRJNA343020	343020	Terrabacteria group	Firmicutes	7.18664	51.9	-	MRTY01	85	6210	6075	1/18/17	4/17/17	Contig	Cornell University	SAMN05929627	GCA_001957005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/957/005/GCA_001957005.1_ASM195700v1	-	FSL R7-0273
Prevotella sp. CAG:617	1262933	PRJEB960	206899	FCB group	Bacteroidetes/Chlorobi group	2.2843	49.1	-	CBKM01	87	1968	1928	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138790	GCA_000438115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/115/GCA_000438115.1_MGS617	-	-
Mycobacterium sp. 852013-51886_SCH5428379	1834111	PRJNA305922	305922	Terrabacteria group	Actinobacteria	4.76349	68.7	-	LZSU01	52	4560	4406	6/17/16	4/12/17	Contig	JCVI	SAMN04691969	GCA_001665575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/575/GCA_001665575.1_ASM166557v1	-	852013-51886_SCH5428379
Streptococcus sp. HMSC034B04	1715122	PRJNA296250	296250	Terrabacteria group	Firmicutes	2.10756	38.8	-	LTSC01	87	2124	1873	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498621	GCA_001835835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/835/GCA_001835835.1_ASM183583v1	-	HMSC034B04
Arthrobacter sp. ov407	1761748	PRJEB16108	348602	Terrabacteria group	Actinobacteria	4.2644	66.5	-	FNGD01	27	3965	3792	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487916	GCA_900102895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/895/GCA_900102895.1_IMG-taxon_2609459738_annotated_assembly	-	OV407
Corynebacterium sp. HMSC071B10	1739494	PRJNA300144	300144	Terrabacteria group	Actinobacteria	2.62596	64.3	-	LTUC01	94	2445	2290	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480411	GCA_001814825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/825/GCA_001814825.1_ASM181482v1	-	HMSC071B10
Staphylococcus sp. HMSC057C08	1739501	PRJNA300151	300151	Terrabacteria group	Firmicutes	2.72464	35.8	-	LTTV01	114	2610	2501	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480418	GCA_001814965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/965/GCA_001814965.1_ASM181496v1	-	HMSC057C08
Enterobacter cloacae complex sp. 44242	1870939	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.08469	56	-	JZYA01	103	5098	4837	3/19/15	4/10/17	Contig	JCVI	SAMN03283668	GCA_000958265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/265/GCA_000958265.1_ASM95826v1	-	44242
Rhodococcus sp. 06-412-2C	2022487	PRJNA395383	395383	Terrabacteria group	Actinobacteria	6.21349	64	-	NOYG01	30	5860	5712	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376357	GCA_002258295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/295/GCA_002258295.1_ASM225829v1	-	06-412-2C
Clostridium sp. CAG:343	1262796	PRJEB839	206910	Terrabacteria group	Firmicutes	1.42985	26.5	-	CBEQ01	55	1475	1443	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138454	GCA_000431335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/335/GCA_000431335.1_MGS343	-	-
Sphingomonas sp. CCH15-F11	1768785	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	3.68693	66.8	-	LSKG01	189	3617	3425	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299483	GCA_001557005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/005/GCA_001557005.1_ASM155700v1	-	CCH15-F11
Acinetobacter sp. 809848	1310637	PRJNA194713	194713	Proteobacteria	Gammaproteobacteria	4.14543	38.7	-	JEXG01	219	4094	3804	2/25/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02380529	GCA_000581275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/275/GCA_000581275.1_ASM58127v1	-	809848
Bacillus sp. 5B6	1127743	PRJNA79215	79215	Terrabacteria group	Firmicutes	3.89966	46.6	-	AJST01	1	3857	3661	4/23/12	4/7/17	Contig	Korea Research Institute of Bioscience and Biotechnology	SAMN02470191	GCA_000259405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/405/GCA_000259405.1_ASM25940v1	22740678	5B6
Streptomyces sp. URHA0041	1380346	PRJNA213783	213783	Terrabacteria group	Actinobacteria	8.01554	72.3	-	JNIH01	111	7156	6731	6/11/14	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841147	GCA_000701325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/325/GCA_000701325.1_ASM70132v1	-	URHA0041
Pseudomonas sp. HMSC072F09	1715149	PRJNA296277	296277	Proteobacteria	Gammaproteobacteria	6.80708	66	-	LTJA01	200	6551	6209	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477528	GCA_001809805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/805/GCA_001809805.1_ASM180980v1	-	HMSC072F09
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.67471	66.7	-	LPHG01	82	8004	7625	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449532	GCA_001531505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/505/GCA_001531505.1_ASM153150v1	-	MSMB2095WGS
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.95658	64.1	-	FVIR01	68	4950	4754	3/10/17	3/18/17	Scaffold	SC	SAMEA2068973	GCA_900134105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/105/GCA_900134105.1_10396_8_9	-	411
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.26555	55	-	LRCB01	202	5383	4929	1/19/16	4/6/17	Contig	JCVI	SAMN04407768	GCA_001518035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/035/GCA_001518035.1_ASM151803v1	-	GN02710
Enterobacter hormaechei	158836	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.87408	55	-	JZZO01	70	4751	4525	3/19/15	3/25/17	Contig	JCVI	SAMN03283636	GCA_000957925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/925/GCA_000957925.1_ASM95792v1	-	35030
Citrobacter freundii	546	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.30797	51.5	-	JUPU01	315	5350	5063	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03198080	GCA_001059255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/255/GCA_001059255.1_ASM105925v1	26230489	873_CKOS
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	4.02973	38.7	-	MDIC01	163	3965	3731	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022862	GCA_001706555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/555/GCA_001706555.1_ASM170655v1	-	UKK-0539
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.24966	66.9	-	LOZF01	150	7566	7075	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449315	GCA_001527385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/385/GCA_001527385.1_ASM152738v1	-	MSMB2059
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.02499	61.8	-	DCYH01	342	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455333	GCA_002331415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/415/GCA_002331415.1_ASM233141v1	28894102	-
Vibrio sp. JCM 18905	1298600	PRJDB876	243760	Proteobacteria	Gammaproteobacteria	5.15654	44.9	-	BBDZ01	64	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016824	GCA_001315205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/315/205/GCA_001315205.1_ASM131520v1	-	JCM 18905
Mycobacterium abscessus M156	1185414	PRJNA159885	159885	Terrabacteria group	Actinobacteria	5.0164	64.1	-	AKVU01	68	5060	4836	7/20/12	3/18/17	Contig	"Universiti Malaya, Kuala Lumpur"	SAMN02471418	GCA_000280635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/635/GCA_000280635.2_ASM28063v2	23405341	M156
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.53123	56.5	-	NCWF01	93	4455	4246	4/24/17	4/26/17	Contig	FDA/CFSAN	SAMN04329593	GCA_002107695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/695/GCA_002107695.1_ASM210769v1	-	MOD1-E654
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.42003	54.6	-	FLAF01	74	6241	5960	5/19/16	2/21/17	Scaffold	SC	SAMEA2273785	GCA_900083955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/955/GCA_900083955.1_12045_7_17	-	2880STDY5682710
Enterobacter cloacae subsp. cloacae	336306	PRJNA275513	275513	Proteobacteria	Gammaproteobacteria	4.80709	55.7	-	LFDQ02	20	4687	4495	6/24/15	5/24/17	Contig	"West China Hospital, Sichuan University"	SAMN03771262	GCA_001039365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/365/GCA_001039365.2_ASM103936v2	-	WCHECl-1060
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.51834	32.7	-	CUEA01	56	2490	2353	3/31/15	3/26/17	Contig	SC	SAMEA1035137	GCA_001238515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/515/GCA_001238515.1_7067_4_67	-	51-46
Propionibacterium acnes HL097PA1	765064	PRJNA40715	40715	Terrabacteria group	Actinobacteria	2.52058	60.2	-	ADWI01	11	2532	2360	3/31/11	3/30/17	Scaffold	WUGSC	SAMN02299426	GCA_000194905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/905/GCA_000194905.1_ASM19490v1	-	HL097PA1
Burkholderia sp. CAMPA 1040	1904757	PRJNA381363	381363	Proteobacteria	Betaproteobacteria	8.09813	66.6	-	NBYX01	82	7553	7103	4/18/17	4/21/17	Contig	Universidad Nacional de La Plata	SAMN06675007	GCA_002099195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/195/GCA_002099195.1_ASM209919v1	-	CAMPA 1040
Campylobacter coli BIGS0015	1247738	PRJNA177352	177352	Proteobacteria	delta/epsilon subdivisions	1.5942	31.7	-	ANGZ01	216	1698	1546	11/23/12	3/15/17	Contig	Swansea University	SAMN01795899	GCA_000314305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/305/GCA_000314305.1_ASM31430v1	23279096	BIGS0015
Lactobacillus plantarum	1590	PRJNA314120	314120	Terrabacteria group	Firmicutes	3.55084	44.1	-	LUXO01	44	3508	3136	4/28/16	4/10/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04528998	GCA_001633255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/255/GCA_001633255.1_ASM163325v1	-	NAB2
Serratia marcescens	615	PRJNA374552	374552	Proteobacteria	Gammaproteobacteria	5.15713	59.6	-	MVGB01	14	4955	4786	3/15/17	3/17/17	Contig	University of Cambridge	SAMN06328413	GCA_002029225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/225/GCA_002029225.1_ASM202922v1	-	CAPREX_SY21
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.59266	47.1	-	CPZT01	42	4265	4057	3/23/15	3/26/17	Scaffold	SC	SAMEA980132	GCA_001086525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/525/GCA_001086525.1_4976_6_7	-	ERL08708
Mycoplasma pneumoniae	2104	PRJNA291007	291007	Terrabacteria group	Tenericutes	0.822278	40.1	-	LHQE01	11	804	693	9/22/15	4/4/17	Scaffold	Centre for genomic regulation (CRG)	SAMN03897315	GCA_001296895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/895/GCA_001296895.1_ASM129689v1	26335586	Mympn_5837
Corynebacterium diphtheriae	1717	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.40751	53.6	-	MSIJ01	54	2340	2121	6/20/17	6/22/17	Contig	Northumbria University	SAMN06174241	GCA_002201005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/005/GCA_002201005.1_ASM220100v1	-	768a
Staphylococcus condimenti	70255	PRJNA317039	317039	Terrabacteria group	Firmicutes	2.65968	34.7	chromosome:NZ_CP015114.1/CP015114.1	-	1	2573	2440	4/12/16	4/12/17	Complete Genome	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN04599314	GCA_001618885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/885/GCA_001618885.1_ASM161888v1	-	DSM 11674
Brucella melitensis UK37/05	1160216	PRJNA173576	173576	Proteobacteria	Alphaproteobacteria	3.30117	57.2	-	AQKM01	10	3378	3156	4/16/13	4/1/17	Scaffold	Broad Institute	SAMN00811222	GCA_000370865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/865/GCA_000370865.1_Bruc_meli_UK37_05_V1	-	UK37/05
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.98232	46.6	-	JTIF01	334	3097	2649	6/3/16	4/10/17	Contig	Wageningen University	SAMN03196631	GCA_001657005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/005/GCA_001657005.1_ASM165700v1	-	Lrh24
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.30106	40.3	-	LQDW01	26	2160	2060	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366518	GCA_001930285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/285/GCA_001930285.1_ASM193028v1	-	2389PM
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.09579	41.4	-	CWEJ01	79	2043	1860	6/24/15	3/26/17	Contig	SC	SAMEA1032840	GCA_001176465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/465/GCA_001176465.1_6903_8_52	-	EQUI0197
Stenotrophomonas maltophilia	40324	PRJNA390523	390523	Proteobacteria	Gammaproteobacteria	4.44418	66.6	-	NIVS01	60	3986	3878	6/22/17	6/24/17	Contig	JCVI	SAMN07237143	GCA_002205165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/165/GCA_002205165.1_ASM220516v1	-	13146
Enterococcus faecium ERV1	1134819	PRJNA82027	82027	Terrabacteria group	Firmicutes	2.86245	37.7	-	AMAY01	167	2952	2817	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299494	GCA_000295435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/435/GCA_000295435.2_ASM29543v2	-	ERV1
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.09744	52.6	-	CQOQ01	81	2463	2123	3/22/15	4/11/17	Contig	SC	SAMEA1690383	GCA_001086345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/345/GCA_001086345.1_8727_8_40	-	GCGS136
Streptococcus mutans TCI-92	1074109	PRJNA71971	71971	Terrabacteria group	Firmicutes	1.94139	36.7	-	AGMY01	49	1952	1866	10/6/11	3/22/17	Contig	JCVI	SAMN02436597	GCA_000230185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/185/GCA_000230185.2_SMUT3-NEX_62-92	-	TCI-92
Enterococcus faecalis ERV63	1134793	PRJNA81975	81975	Terrabacteria group	Firmicutes	3.16512	37.3	-	ALZR01	94	3300	3131	8/27/12	3/27/17	Scaffold	Washington University	SAMN02299469	GCA_000294165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/165/GCA_000294165.2_ASM29416v2	-	ERV63
Clostridium botulinum	1491	PRJNA239370	239370	Terrabacteria group	Firmicutes	3.96046	28.2	-	JFGG01	418	3892	3461	7/18/14	3/24/17	Contig	Centers for Disease Control and Prevention	SAMN02664949	GCA_000730785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/785/GCA_000730785.1_ASM73078v1	25031122	CDC48761
Lactobacillus acidophilus	1579	PRJNA271341	271341	Terrabacteria group	Firmicutes	1.99197	34.7	chromosome:NZ_CP010432.1/CP010432.1	-	1	1977	1868	2/25/15	4/3/17	Complete Genome	"Fidelity Systems, Inc."	SAMN03274004	GCA_000934625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/625/GCA_000934625.1_ASM93462v1	25858829	FSI4
Bacillus subtilis subsp. spizizenii DV1-B-1	1051503	PRJNA68563	68563	Terrabacteria group	Firmicutes	3.97455	43.6	-	AFSG01	20	4153	3792	1/25/12	3/22/17	Contig	Institute for Genome Sciences	SAMN02435808	GCA_000245035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/035/GCA_000245035.2_ASM24503v2	22493193	DV1-B-1
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.14042	45.3	-	LPUZ01	49	4941	4696	4/4/16	3/19/17	Scaffold	Health Canada	SAMN04358131	GCA_001609435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/435/GCA_001609435.1_ASM160943v1	-	May-92
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.88602	38	-	MLMI01	187	1931	1731	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297048	GCA_001867835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/835/GCA_001867835.1_ASM186783v1	27118061	AWRIB333
Xanthomonas oryzae pv. oryzae	64187	PRJNA269404	269404	Proteobacteria	Gammaproteobacteria	4.26189	63.9	-	JXEA01	402	4246	3423	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252503	GCA_001928215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/215/GCA_001928215.1_ASM192821v1	-	BXO512
Xanthomonas citri subsp. citri	611301	PRJEB7192	265970	Proteobacteria	Gammaproteobacteria	5.37627	64.6	-	CDAS01	417	4936	4519	11/10/14	4/2/17	Contig	CIRAD	SAMEA2827558	GCA_000825365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/365/GCA_000825365.1_XACLH37	-	LH37-1
Brucella abortus F6/05-9	1160208	PRJNA173630	173630	Proteobacteria	Alphaproteobacteria	3.28095	57.2	-	AQJT01	13	3348	3106	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00811182	GCA_000370485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/485/GCA_000370485.1_Bruc_abor_F6_05-9_V1	-	F6/05-9
Francisella tularensis	263	PRJNA253522	253522	Proteobacteria	Gammaproteobacteria	1.86204	32.4	-	JPMK01	95	2014	1559	2/25/16	4/5/17	Contig	Swedish Defence Research Agency	SAMN02870480	GCA_001574705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/705/GCA_001574705.1_ASM157470v1	-	NO-6/2011
Clostridioides difficile CD43	1151266	PRJNA85705	85705	Terrabacteria group	Firmicutes	4.32903	28.2	-	AVGW01	106	4075	3837	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01978894	GCA_000449025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/025/GCA_000449025.2_ASM44902v2	-	CD43
Vibrio cholerae CP1044(17)	991994	PRJNA63995	63995	Proteobacteria	Gammaproteobacteria	4.0102	47.4	-	ALDG01	135	3846	3616	10/4/12	3/23/17	Scaffold	Institute for Genome Sciences	SAMN00622048	GCA_000303045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/045/GCA_000303045.1_ASM30304v1	-	CP1044(17)
Bacillus thuringiensis	1428	PRJNA325401	325401	Terrabacteria group	Firmicutes	5.77329	34.8	-	LZRC01	134	6092	5773	11/18/16	4/5/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05231665	GCA_001883945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/945/GCA_001883945.1_ASM188394v1	-	FN31
Chlamydia trachomatis K/SotonK1	1071768	PRJEA71097	71097	PVC group	Chlamydiae	1.04994	41.2643	chromosome:NC_020965.1/HE601794.1; plasmid pSotonK1:NC_020963.1/HE603238.1	-	2	976	913	3/13/12	3/23/17	Chromosome	Sanger Institute	SAMEA2272765	GCA_000318805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/805/GCA_000318805.1_ASM31880v1	22406642	K/SotonK1
Burkholderia pseudomallei MSHR1153	1437000	PRJNA231860	231860	Proteobacteria	Betaproteobacteria	7.3129	68.0346	chromosome 1:NZ_CP009271.1/CP009271.1; chromosome 2:NZ_CP009272.1/CP009272.1	-	2	7481	6861	10/31/14	4/10/17	Chromosome	Los Alamos National Laboratory	SAMN03008919	GCA_000770435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/435/GCA_000770435.1_ASM77043v1	-	MSHR1153
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.2551	67	-	MURO01	200	7846	7339	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001852	GCA_001991875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/875/GCA_001991875.1_ASM199187v1	-	VC15235
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.19388	38.5	-	NGPZ01	113	2174	1947	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848379	GCA_002254115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/115/GCA_002254115.1_ASM225411v1	-	105i
Bacteroides fragilis str. S6L8	1339319	PRJNA206162	206162	FCB group	Bacteroidetes/Chlorobi group	5.22571	43.4	-	JGES01	100	4751	4441	3/20/14	4/2/17	Contig	IGS	SAMN02314560	GCA_000599385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/385/GCA_000599385.1_ASM59938v1	-	S6L8
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.22276	50.4	-	NPZJ01	272	5607	5102	8/11/17	8/15/17	Contig	JCVI	SAMN07450615	GCA_002246115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/115/GCA_002246115.1_ASM224611v1	-	ECCTRSRTH04
Legionella pneumophila subsp. pneumophila	91891	PRJNA239272	239272	Proteobacteria	Gammaproteobacteria	3.41374	38.3	-	JFIP01	13	3089	2994	3/7/14	3/24/17	Scaffold	Beijing Institute of Microbiology and Epidemiology	SAMN02650964	GCA_000586375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/375/GCA_000586375.1_ATCC_33152	-	ATCC 33152
Pseudomonas syringae CC1543	1357277	PRJNA211398	211398	Proteobacteria	Gammaproteobacteria	5.77748	59.2	-	AVEJ02	441	5234	4923	8/20/13	3/24/17	Contig	University of Arizona	SAMN02471554	GCA_000452725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/725/GCA_000452725.2_CC1543_092313_2.0	24459267	CC1543
Streptococcus suis YS23	1214193	PRJNA171456	171456	Terrabacteria group	Firmicutes	2.34587	41.4	-	ALMI01	85	2304	2142	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469510	GCA_000441115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/115/GCA_000441115.1_version1	-	YS23
Streptococcus agalactiae GB00082	1154897	PRJNA86467	86467	Terrabacteria group	Firmicutes	2.04603	35.1	-	ALSR01	23	2109	1987	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991161	GCA_000288215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/215/GCA_000288215.1_ASM28821v1	-	GB00082
Acinetobacter baumannii	470	PRJNA286874	286874	Proteobacteria	Gammaproteobacteria	4.26391	39.1281	chromosome:NZ_CP021345.1/CP021345.1; plasmid pB11911:NZ_CP021344.1/CP021344.1	-	4	4138	3948	5/31/17	6/4/17	Chromosome	University of Kansas Medical Center	SAMN03771550	GCA_001077565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/565/GCA_001077565.2_ASM107756v2	26358595	B11911
Cellulophaga baltica 18	1348584	PRJNA209292	209292	FCB group	Bacteroidetes/Chlorobi group	4.63511	34.7	chromosome:NZ_CP009976.1/CP009976.1	-	1	3967	3882	12/9/14	4/10/17	Complete Genome	University of Arizona	SAMN02208949	GCA_000468615.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/615/GCA_000468615.2_ASM46861v2	24428166	18
Bifidobacterium longum subsp. longum 72B	1457184	PRJNA236797	236797	Terrabacteria group	Actinobacteria	2.37445	60.3	-	JNWA01	30	2102	1961	7/16/14	4/2/17	Scaffold	Pirogov Russian National Research Medical University	SAMN02862994	GCA_000730045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/045/GCA_000730045.1_ASM73004v1	-	72B
Shigella flexneri	623	PRJNA315925	315925	Proteobacteria	Gammaproteobacteria	4.66781	50.6	-	LVJC01	435	5423	4282	5/20/16	8/11/17	Contig	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04570190	GCA_001649375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/375/GCA_001649375.1_ASM164937v1	-	SH4s02
Bacillus anthracis str. Carbosap	1245029	PRJNA177917	177917	Terrabacteria group	Firmicutes	5.40297	35.1	-	ANAO01	21	6082	5681	11/5/12	5/18/17	Contig	National Biodefense Analysis & Countermeasures Center	SAMN02470598	GCA_000310045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/045/GCA_000310045.1_Carbosap_v1	23405332	Carbosap
Pseudomonas putida	303	PRJNA295871	295871	Proteobacteria	Gammaproteobacteria	5.13991	62.3	-	LKBN01	3451	4688	3423	12/15/15	12/15/15	Contig	New Zealand Institute for Plant & Food research	SAMN04092564	GCA_001467195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/195/GCA_001467195.1_ASM146719v1	-	ABAC63
Leptospira interrogans serovar Copenhageni str. 2002009669	1291318	PRJNA188971	188971	Spirochaetes	Spirochaetia	4.57294	35	-	AOWS01	155	4088	3742	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920624	GCA_000343105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/105/GCA_000343105.1_CA_glsol042	-	2002009669
Streptococcus pyogenes ABC020016937	1439026	PRJNA233235	233235	Terrabacteria group	Firmicutes	1.81151	38.4	-	JJFR01	5	1844	1733	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567584	GCA_000629965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/965/GCA_000629965.1_Stre_pyog_ABC020016937_V1	-	ABC020016937
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.17301	51.7	chromosome:NZ_CP016882.1/CP016882.1	-	1	2519	2175	8/11/16	3/21/17	Chromosome	Centers for Disease Control and Prevention	SAMN04883380	GCA_001703695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/703/695/GCA_001703695.1_ASM170369v1	-	M22747
Cellulophaga baltica NN016038	1348585	PRJNA209293	209293	FCB group	Bacteroidetes/Chlorobi group	4.56054	34.7	chromosome:NZ_CP009887.1/CP009887.1	-	1	3977	3876	11/19/14	4/9/17	Complete Genome	University of Arizona	SAMN02208950	GCA_000477035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/035/GCA_000477035.2_ASM47703v2	24428166	NN016038
Streptococcus pneumoniae	1313	PRJNA229402	229402	Terrabacteria group	Firmicutes	2.11341	39.7	-	JFIS01	242	2231	1970	10/2/14	3/10/17	Scaffold	Harvard Medical School / Massachusetts Eye and Ear Infirmary	SAMN02641273	GCA_000762765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/765/GCA_000762765.1_Sp_1854.v1.0	-	ECC_1854
Lactobacillus acidophilus La-14	1314884	PRJNA196176	196176	Terrabacteria group	Firmicutes	1.99158	34.7	chromosome:NC_021181.2/CP005926.2	-	1	1978	1862	5/6/13	4/1/17	Complete Genome	DuPont	SAMN02603216	GCA_000389675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/675/GCA_000389675.2_ASM38967v2	23788546	La-14
Mycobacterium tuberculosis TRS20	1334066	PRJNA203178	203178	Terrabacteria group	Actinobacteria	4.41153	65.5	chromosome:NZ_CP009174.1/CP009174.1	-	1	4297	4088	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837640	GCA_001997805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/805/GCA_001997805.1_ASM199780v1	27261264	TRS20
Haemophilus influenzae	727	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.98761	38.3	-	JVRF01	63	2073	1912	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197367	GCA_001055615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/615/GCA_001055615.1_ASM105561v1	26230489	177_HINF
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.21089	69.1	-	LVCS01	499	5078	4592	1/18/17	4/6/17	Contig	Robert Koch Institute	SAMN04566723	GCA_001956335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/335/GCA_001956335.1_ASM195633v1	-	E-128
Lactococcus lactis subsp. hordniae NBRC 100931	1348656	PRJDB1322	231379	Terrabacteria group	Firmicutes	2.42828	34.8	-	BCVL01	73	2489	2064	2/27/16	4/5/17	Contig	National Institute of Technology and Evaluation	SAMD00046911	GCA_001591725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/591/725/GCA_001591725.1_ASM159172v1	-	NBRC 100931
Bacillus cereus VD169	1053241	PRJNA70449	70449	Terrabacteria group	Firmicutes	5.95137	35	-	AHFJ01	4	6196	5806	8/15/12	5/18/17	Scaffold	Broad Institute	SAMN02596873	GCA_000290735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/735/GCA_000290735.1_Baci_cere_VD169_V1	-	VD169
Staphylococcus epidermidis VCU013	904315	PRJNA53713	53713	Terrabacteria group	Firmicutes	2.60729	32.1	-	JHTZ01	144	2611	2435	6/3/14	3/24/17	Contig	J. Craig Venter Institute	SAMN00117453	GCA_000697825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/697/825/GCA_000697825.1_gsevcu013v01	-	VCU013
Lactobacillus acidophilus NCFM	272621	PRJNA82	82	Terrabacteria group	Firmicutes	1.99356	34.7	chromosome:NC_006814.3/CP000033.3	-	1	1927	1832	1/27/05	8/3/16	Complete Genome	Cal Poly. San Luis Obispo	SAMN02603047	GCA_000011985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/985/GCA_000011985.1_ASM1198v1	"1,567,116,017,449,630"	NCFM
Yersinia pestis subsp. microtus bv. Caucasica	385966	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.56949	47.6	-	MTZZ01	190	4404	4061	5/10/17	6/5/17	Scaffold	SRCAMB	SAMN04992971	GCA_002165475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/475/GCA_002165475.1_ASM216547v1	-	SCPM-O-B-7005
Pseudomonas fluorescens NBRC 14160	1215100	PRJDB208	171627	Proteobacteria	Gammaproteobacteria	6.36433	60.1	-	BDAA01	67	5879	5687	4/4/17	4/17/17	Contig	National Institute of Technology and Evaluation	SAMD00018759	GCA_002091595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/595/GCA_002091595.1_ASM209159v1	-	NBRC 14160
Candidatus Erwinia sp. ErCipseudotaxifoliae	1922217	PRJEB15506	354854	Proteobacteria	Gammaproteobacteria	1.09467	34.6374	chromosome 1:NZ_LT670851.1/LT670851.1; plasmid pl1:NZ_LT670852.1/LT670852.1	-	2	687	636	12/3/16	4/16/17	Complete Genome	Centre de Biologie pour la Gestion des Populations (CBGP - UMR1062)	SAMEA4560778	GCA_900143135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/135/GCA_900143135.1_ErCipseudotaxifoliae_v1.0	-	ErCipseudotaxifoliae
Bacillus thuringiensis	1428	PRJNA244583	244583	Terrabacteria group	Firmicutes	5.70184	34.6308	chromosome:CP013000.1; plasmid unnamed:CP013001.1	-	2	5785	5534	10/26/15	10/26/15	Complete Genome	"Institute of Plant Protection, Chinese Academy of Agricultural Sciences"	SAMN02727381	GCA_000774075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/075/GCA_000774075.2_ASM77407v2	-	XL6
Campylobacter lanienae NCTC 13004	1031753	PRJNA66799	66799	Proteobacteria	delta/epsilon subdivisions	1.59455	34.6	chromosome:CP015578.1	-	1	1637	1561	5/15/17	5/15/17	Complete Genome	"USDA, ARS, WRRC"	SAMN03737977	GCA_002139935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/935/GCA_002139935.1_ASM213993v1	-	NCTC 13004
Anaerococcus mediterraneensis	1870984	PRJEB15655	347302	Terrabacteria group	Firmicutes	2.08021	34.6	chromosome contig00001:NZ_LT635772.1/LT635772.1	-	1	2035	1930	11/25/16	4/14/17	Complete Genome	URMITE	SAMEA4555797	GCA_900128415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/415/GCA_900128415.1_PRJEB15655	-	Marseille-P2765
Staphylococcus carnosus	1281	PRJNA327949	327949	Terrabacteria group	Firmicutes	2.64511	34.6	chromosome:NZ_CP016760.1/CP016760.1	-	1	2619	2370	8/9/16	4/13/17	Complete Genome	University of Hohenheim	SAMN05362534	GCA_001701005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/005/GCA_001701005.1_ASM170100v1	-	LTH 3730; SK 13; JCM 6069
Coxiella endosymbiont of Amblyomma americanum	325775	PRJNA233416	233416	Proteobacteria	Gammaproteobacteria	0.656901	34.6	chromosome:NZ_CP007541.1/CP007541.1	-	1	610	563	1/6/15	4/17/17	Complete Genome	Portland State University	SAMN03273000	GCA_000815025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/025/GCA_000815025.1_ASM81502v1	-	-
Pseudomonas fluorescens	294	PRJNA394120	394120	Proteobacteria	Gammaproteobacteria	6.0522	60.1	-	NMRO01	421	5433	5283	7/31/17	8/3/17	Contig	New England College	SAMN07349395	GCA_002237665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/665/GCA_002237665.1_ASM223766v1	-	EC1
Yersinia pestis subsp. microtus bv. Altaica	385967	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.65026	47.6	-	NHYJ01	187	4420	4120	6/6/17	6/8/17	Scaffold	SRCAMB	SAMN05521430	GCA_002173795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/795/GCA_002173795.1_ASM217379v1	-	SCPM-O-DNA-05
Staphylococcus carnosus subsp. carnosus TM300	396513	PRJEA34811	34811	Terrabacteria group	Firmicutes	2.56642	34.6	chromosome:NC_012121.1/AM295250.1	-	1	2504	2359	2/2/09	4/6/17	Complete Genome	Competence Network PathoGenoMik	SAMEA2272563	GCA_000009405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/405/GCA_000009405.1_ASM940v1	19060169	TM300
Staphylococcus epidermidis VCU036	904318	PRJNA53719	53719	Terrabacteria group	Firmicutes	2.42538	32	-	JHUA01	68	2373	2258	6/3/14	3/24/17	Contig	J. Craig Venter Institute	SAMN00138235	GCA_000697905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/697/905/GCA_000697905.1_gsevcu036v01	-	VCU036
Bacillus cereus VD166	1053240	PRJNA70447	70447	Terrabacteria group	Firmicutes	6.14684	34.8	-	AHFI01	11	6427	6084	8/15/12	5/18/17	Scaffold	Broad Institute	SAMN02596872	GCA_000290755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/755/GCA_000290755.1_Baci_cere_VD166_V1	-	VD166
Lactococcus lactis subsp. cremoris	1359	PRJNA286840	286840	Terrabacteria group	Firmicutes	2.36102	35.5	-	LIYF01	46	2281	2164	4/18/16	4/5/17	Contig	Radboudumc	SAMN03770947	GCA_001622205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/205/GCA_001622205.1_ASM162220v1	-	KW10
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	4.98147	69.3	-	BDMW01	308	4753	4469	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076681	GCA_002089135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/135/GCA_002089135.1_ASM208913v1	28045086	DH-2
Haemophilus influenzae	727	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.801	38	-	JVIR01	45	1776	1646	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197589	GCA_001056575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/575/GCA_001056575.1_ASM105657v1	26230489	40_HINF
Mycobacterium tuberculosis TRS13	1334059	PRJNA203171	203171	Terrabacteria group	Actinobacteria	4.41153	65.4	chromosome:NZ_CP009175.1/CP009175.1	-	1	4285	4065	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837633	GCA_001997885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/885/GCA_001997885.1_ASM199788v1	27261264	TRS13
Lactobacillus johnsonii NCC 533	257314	PRJNA9638	9638	Terrabacteria group	Firmicutes	1.99268	34.6	chromosome:NC_005362.1/AE017198.1	-	1	1914	1749	2/2/04	3/29/17	Complete Genome	"Nestle Research Center, Switzerland"	SAMN02603676	GCA_000008065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/065/GCA_000008065.1_ASM806v1	"1,498,304,015,006,820"	NCC 533
Streptococcus pneumoniae	1313	PRJNA229402	229402	Terrabacteria group	Firmicutes	2.12627	39.7	-	JFIU01	128	2253	1982	10/2/14	3/6/17	Scaffold	Harvard Medical School / Massachusetts Eye and Ear Infirmary	SAMN02641274	GCA_000762785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/785/GCA_000762785.1_Sp_2439.v1.0	-	ECC_2439
Flammeovirga sp. MY04	1191459	PRJNA167040	167040	FCB group	Bacteroidetes/Chlorobi group	7.32761	34.5615	chromosome 1:NZ_CP003560.1/CP003560.1; chromosome 2:NZ_CP003561.1/CP003561.1; plasmid unnamed:NZ_CP003562.1/CP003562.1	-	3	5620	5467	7/8/16	4/17/17	Complete Genome	shandong university	SAMN03799769	GCA_001682195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/195/GCA_001682195.1_ASM168219v1	-	MY04
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.16208	51.8	chromosome:NZ_CP016881.1/CP016881.1	-	1	2500	2167	8/11/16	3/21/17	Chromosome	Centers for Disease Control and Prevention	SAMN04883367	GCA_001703715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/703/715/GCA_001703715.1_ASM170371v1	-	M07999
Streptococcus pyogenes ABC020015294	1439017	PRJNA233228	233228	Terrabacteria group	Firmicutes	1.83088	38.5	-	JJFS01	2	1881	1755	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567577	GCA_000629985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/985/GCA_000629985.1_Stre_pyog_ABC020015294_V1	-	ABC020015294
Leptospira interrogans str. Fiocruz LV4114	1291364	PRJNA188991	188991	Spirochaetes	Spirochaetia	4.61382	35	-	AOVZ01	141	4137	3750	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920130	GCA_000343125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/125/GCA_000343125.1_CA_glsol096	-	Fiocruz LV4114
Pseudomonas putida	303	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	6.95803	66	-	LORX01	3	6319	4843	12/21/15	12/21/15	Contig	US Food and Drug Administration 	SAMN03996267	GCA_001471435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/435/GCA_001471435.1_ASM147143v1	-	FDAARGOS_121
Bacillus anthracis str. 3166	1248436	PRJNA178573	178573	Terrabacteria group	Firmicutes	5.50514	35.2	-	ANFG01	5	6137	5755	12/12/12	5/18/17	Contig	Northern Arizona University	SAMN02470706	GCA_000319715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/715/GCA_000319715.1_BA_3166assembly	23599294	3166
Shigella flexneri	623	PRJNA385907	385907	Proteobacteria	Gammaproteobacteria	4.65845	50.5	-	NGVX01	474	5308	4180	6/6/17	8/4/17	Contig	Christian Medical College	SAMN06920487	GCA_002174515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/515/GCA_002174515.1_ASM217451v1	-	FC1607
Bifidobacterium longum subsp. longum 7-1B	1350472	PRJNA209581	209581	Terrabacteria group	Actinobacteria	2.40709	59.8	-	JNVY01	34	2067	1939	7/16/14	4/2/17	Scaffold	Pirogov Russian National Research Medical University	SAMN02862992	GCA_000730055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/055/GCA_000730055.1_ASM73005v1	-	7-1B
Staphylococcus condimenti	70255	PRJNA357697	357697	Terrabacteria group	Firmicutes	2.70089	34.5504	chromosome:NZ_CP018776.1/CP018776.1; plasmid pStO2014-01:NZ_CP018777.1/CP018777.1	-	2	2588	2470	12/27/16	4/16/17	Complete Genome	St. Olavs University Hospital	SAMN06159561	GCA_001922405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/405/GCA_001922405.1_ASM192240v1	-	StO 2014-01
Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841	575584	PRJNA38509	38509	Proteobacteria	Gammaproteobacteria	3.97152	39.1	-	ACQB01	22	3803	3637	9/30/09	3/15/17	Scaffold	Broad Institute	SAMN02463741	GCA_000162295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/295/GCA_000162295.1_ASM16229v1	23144699	ATCC 19606
Streptococcus agalactiae GB00020	1154896	PRJNA86465	86465	Terrabacteria group	Firmicutes	2.06414	35.3	-	ALSQ01	24	2124	2007	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991163	GCA_000288235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/235/GCA_000288235.1_ASM28823v1	-	GB00020
Streptococcus suis YS24	1214194	PRJNA171457	171457	Terrabacteria group	Firmicutes	2.10712	41.2	-	ALMJ01	59	2101	1974	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469511	GCA_000441135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/135/GCA_000441135.1_version1	-	YS24
Pseudomonas syringae CC1524	1357276	PRJNA211397	211397	Proteobacteria	Gammaproteobacteria	5.82837	59.1	-	AVEK02	264	5307	5111	8/20/13	3/24/17	Contig	University of Arizona	SAMN02471572	GCA_000452745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/745/GCA_000452745.2_CC1524_092313_2.0	24459267	CC1524
Legionella pneumophila	446	PRJNA281021	281021	Proteobacteria	Gammaproteobacteria	3.56957	38.2	-	LAXP01	45	3276	3126	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03481556	GCA_001582135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/135/GCA_001582135.1_ASM158213v1	26888563	ATCC 33153
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.38963	50.5	-	NPZM01	178	5665	5192	8/11/17	8/15/17	Contig	JCVI	SAMN07450571	GCA_002246165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/165/GCA_002246165.1_ASM224616v1	-	ECCRETH04
Bacteroides fragilis str. 1007-1-F #5	1339339	PRJNA206182	206182	FCB group	Bacteroidetes/Chlorobi group	5.49155	43.3	-	JGVD01	157	5011	4659	3/26/14	4/18/17	Contig	IGS	SAMN02315076	GCA_000601035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/035/GCA_000601035.1_ASM60103v1	-	1007-1-F #5
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.18223	38.4	-	NGQB01	78	2169	1954	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848377	GCA_002254165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/165/GCA_002254165.1_ASM225416v1	-	105c
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.10516	67	-	MURQ01	169	7854	7273	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001854	GCA_001991885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/885/GCA_001991885.1_ASM199188v1	-	VC4927
Burkholderia pseudomallei MSHR3965	1435372	PRJNA231179	231179	Proteobacteria	Betaproteobacteria	7.28074	68.0455	chromosome 1:NZ_CP009153.1/CP009153.1; chromosome 2:NZ_CP009152.1/CP009152.1	-	2	7542	6943	10/31/14	4/10/17	Chromosome	Los Alamos National Laboratory	SAMN02951657	GCA_000770475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/475/GCA_000770475.1_ASM77047v1	25676747	MSHR3965
Chlamydia trachomatis L2b/LST	1071775	PRJEA71111	71111	PVC group	Chlamydiae	1.04638	41.2634	chromosome:NC_020975.1/HE601958.1; plasmid pL2bLST:NC_020985.1/HE603226.1	-	2	974	901	3/13/12	3/23/17	Chromosome	Sanger Institute	SAMEA2272379	GCA_000318945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/945/GCA_000318945.1_ASM31894v1	22406642	L2b/LST
Bacillus thuringiensis	1428	PRJNA358211	358211	Terrabacteria group	Firmicutes	5.99602	34.9	-	MSFC01	80	6308	5876	1/23/17	4/6/17	Contig	INTA	SAMN06167427	GCA_001968805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/968/805/GCA_001968805.1_ASM196880v1	-	INTA Fr7-4
Vibrio cholerae CP1050(23)	991996	PRJNA63999	63999	Proteobacteria	Gammaproteobacteria	4.024	47.5	-	ALDK01	114	3845	3591	10/4/12	3/23/17	Scaffold	Institute for Genome Sciences	SAMN00622047	GCA_000303065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/065/GCA_000303065.1_ASM30306v1	-	CP1050(23)
Clostridioides difficile CD44	1151267	PRJNA85707	85707	Terrabacteria group	Firmicutes	3.99411	28.4	-	AVGX01	247	3722	3509	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766617	GCA_000449045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/045/GCA_000449045.2_ASM44904v2	-	CD44
Francisella tularensis	263	PRJNA253522	253522	Proteobacteria	Gammaproteobacteria	1.86212	32.3	-	JPML01	96	2020	1560	2/25/16	4/5/17	Contig	Swedish Defence Research Agency	SAMN02870481	GCA_001574735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/735/GCA_001574735.1_ASM157473v1	-	NO-7/2011
Brucella abortus NI352	1160165	PRJNA173558	173558	Proteobacteria	Alphaproteobacteria	3.28658	57.2	-	AQJU01	4	3376	3155	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00811188	GCA_000370505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/505/GCA_000370505.1_Bruc_abor_NI352_V1	-	NI352
Xanthomonas citri subsp. citri	611301	PRJEB7193	265971	Proteobacteria	Gammaproteobacteria	5.31981	64.7	-	CDAQ01	426	4913	4472	11/4/14	4/2/17	Contig	CIRAD	SAMEA2827237	GCA_000825385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/385/GCA_000825385.1_XAC3612	-	NCPPB 3612
Xanthomonas oryzae pv. oryzae	64187	PRJNA269407	269407	Proteobacteria	Gammaproteobacteria	4.25865	63.9	-	JXED01	400	4242	3415	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252506	GCA_001928245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/245/GCA_001928245.1_ASM192824v1	-	BXO558
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.89721	37.8	-	MLMO01	301	1905	1701	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297054	GCA_001867865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/865/GCA_001867865.1_ASM186786v1	27118061	AWRIB341
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.06537	45.3	-	LPVN01	80	4878	4586	4/4/16	3/19/17	Scaffold	Health Canada	SAMN04358200	GCA_001609475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/475/GCA_001609475.1_ASM160947v1	-	C148
Bacillus subtilis subsp. inaquosorum KCTC 13429	1236548	PRJNA176182	176182	Terrabacteria group	Firmicutes	4.34245	43.7	-	AMXN01	24	4365	4166	1/22/13	6/15/17	Contig	Chung-Ang university	SAMN02470204	GCA_000332645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/645/GCA_000332645.1_BSI1.0	24231292	KCTC 13429
Candidatus Liberibacter africanus PTSAPSY	1277257	PRJNA185151	185151	Proteobacteria	Alphaproteobacteria	1.19223	34.5	chromosome:NZ_CP004021.1/CP004021.1	-	1	1093	991	6/5/15	4/17/17	Complete Genome	USDA-ARS	SAMN03763724	GCA_001021085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/085/GCA_001021085.1_ASM102108v1	26184931	PTSAPSY
Clostridium botulinum	1491	PRJNA239370	239370	Terrabacteria group	Firmicutes	3.89046	28.2	-	JFGF01	399	3790	3285	7/18/14	3/24/17	Contig	Centers for Disease Control and Prevention	SAMN02664951	GCA_000730795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/795/GCA_000730795.1_ASM73079v1	25031122	CDC52271
Enterococcus faecalis ERV65	1134794	PRJNA81977	81977	Terrabacteria group	Firmicutes	3.09327	37.3	-	ALZS01	102	3198	3040	8/27/12	3/27/17	Scaffold	Washington University	SAMN02299470	GCA_000294185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/185/GCA_000294185.2_ASM29418v2	-	ERV65
Streptococcus mutans TCI-96	1074111	PRJNA71973	71973	Terrabacteria group	Firmicutes	1.80055	37	-	AGMZ01	121	1822	1715	10/6/11	3/22/17	Contig	JCVI	SAMN02436526	GCA_000230205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/205/GCA_000230205.2_SMUT3-NEX_93-96	-	TCI-96
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.15194	52.4	-	CQJE01	78	2534	2201	3/23/15	4/11/17	Contig	SC	SAMEA1690324	GCA_001086405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/405/GCA_001086405.1_8289_2_70	-	GCGS070
Enterococcus faecium E422	1134818	PRJNA82025	82025	Terrabacteria group	Firmicutes	2.89949	37.7	-	AMAZ01	243	2976	2803	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299493	GCA_000295455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/455/GCA_000295455.2_ASM29545v2	-	E422
Stenotrophomonas maltophilia	40324	PRJNA390523	390523	Proteobacteria	Gammaproteobacteria	4.69507	66.3	-	NIVT01	148	4396	4248	6/22/17	6/26/17	Contig	JCVI	SAMN07237142	GCA_002205175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/175/GCA_002205175.1_ASM220517v1	-	163919
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.16229	41.2	-	CWGB01	96	2103	1913	6/24/15	3/26/17	Contig	SC	SAMEA1032841	GCA_001176485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/485/GCA_001176485.1_6817_2_75	-	EQUI0028
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.29421	40.3	-	LQDS01	30	2157	2057	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366514	GCA_001930305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/305/GCA_001930305.1_ASM193030v1	-	2335PM
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.80094	46.7	-	JTIK01	360	2946	2493	6/3/16	4/10/17	Contig	Wageningen University	SAMN03196626	GCA_001657025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/025/GCA_001657025.1_ASM165702v1	-	Lrh2
Brucella melitensis 02-5863-1	1341686	PRJNA217062	217062	Proteobacteria	Alphaproteobacteria	3.30042	57.2	-	AXMZ01	10	3381	3155	10/24/13	4/2/17	Scaffold	Broad Institute	SAMN02334516	GCA_000480095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/095/GCA_000480095.1_Bruc_meli_02-5863-1_V1	-	02-5863-1
Candidatus Endolissoclinum faulkneri L5	1401328	PRJNA219340	219340	Proteobacteria	Alphaproteobacteria	1.51864	34.5	chromosome:NZ_CP006745.1/CP006745.1	-	1	862	772	12/18/13	4/9/17	Complete Genome	University of Utah	SAMN02641640	GCA_000510265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/510/265/GCA_000510265.1_ASM51026v1	24324632	L5
Corynebacterium diphtheriae	1717	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.37097	53.6	-	MSIL01	36	2332	2127	6/20/17	6/22/17	Contig	Northumbria University	SAMN06174243	GCA_002201055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/055/GCA_002201055.1_ASM220105v1	-	5197
Mycoplasma pneumoniae	2104	PRJNA291007	291007	Terrabacteria group	Tenericutes	0.819975	40.1	-	LHQJ01	16	807	681	9/22/15	4/10/17	Scaffold	Centre for genomic regulation (CRG)	SAMN03897320	GCA_001296905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/905/GCA_001296905.1_ASM129690v1	26335586	Mympn_6421
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.75235	47.2	-	CPYS01	40	4502	4319	3/23/15	3/26/17	Scaffold	SC	SAMEA980183	GCA_001087205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/205/GCA_001087205.1_5116_2_3	-	YE15/07
Serratia marcescens	615	PRJNA360658	360658	Proteobacteria	Gammaproteobacteria	5.33614	59.4	-	MTBF01	48	5094	4920	4/17/17	4/21/17	Contig	Hubei University	SAMN06214044	GCA_002094145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/145/GCA_002094145.1_ASM209414v1	-	MEW06
Lactobacillus plantarum	1590	PRJNA314117	314117	Terrabacteria group	Firmicutes	3.65107	43.9	-	LUXM01	42	3606	3222	4/28/16	4/10/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04528996	GCA_001633265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/265/GCA_001633265.1_ASM163326v1	-	19.1
Campylobacter coli BIGS0017	1247740	PRJNA177352	177352	Proteobacteria	delta/epsilon subdivisions	1.63358	31.5	-	ANHB01	79	1697	1607	11/23/12	3/15/17	Contig	Swansea University	SAMN01795901	GCA_000314345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/345/GCA_000314345.1_ASM31434v1	23279096	BIGS0017
Burkholderia sp. HI4860	2015361	PRJNA391085	391085	Proteobacteria	Betaproteobacteria	8.25647	66.6	-	NKFO01	67	7677	7345	7/20/17	7/22/17	Contig	University of Michigan	SAMN07257396	GCA_002223045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/045/GCA_002223045.1_ASM222304v1	-	HI4860
Propionibacterium acnes HL099PA1	765063	PRJNA40717	40717	Terrabacteria group	Actinobacteria	2.57988	60.1	-	ADWH01	45	2637	2465	4/12/11	3/30/17	Scaffold	WUGSC	SAMN02299427	GCA_000203995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/203/995/GCA_000203995.1_ASM20399v1	-	HL099PA1
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.44688	32.7	-	CUHD01	87	2385	2284	3/31/15	3/26/17	Contig	SC	SAMEA1035050	GCA_001238665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/665/GCA_001238665.1_7068_7_59	-	97208
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.65813	55.2	-	JWET01	101	4493	4358	7/10/15	3/26/17	Contig	University of Washington	SAMN03197015	GCA_001053725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/725/GCA_001053725.1_ASM105372v1	26230489	1049_ECLO
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.3373	54.8	-	FKZZ01	61	6214	5947	5/19/16	2/21/17	Scaffold	SC	SAMEA2273618	GCA_900083965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/965/GCA_900083965.1_12045_6_81	-	2880STDY5682542
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.4304	57	-	NCWG01	106	4297	4098	4/24/17	4/26/17	Contig	FDA/CFSAN	SAMN04329589	GCA_002107705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/705/GCA_002107705.1_ASM210770v1	-	MOD1-254N
Mycobacterium abscessus subsp. bolletii 1S-154-0310	1001707	PRJNA65145	65145	Terrabacteria group	Actinobacteria	4.89595	64.3	-	AKUL01	5	4900	4793	6/19/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00672618	GCA_000308015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/015/GCA_000308015.1_ASM30801v1	-	1S-154-0310
Vibrio sp. MedPE-SWchi	1860091	PRJNA318731	318731	Proteobacteria	Gammaproteobacteria	2.56966	44.5	-	MPDB01	26	2336	2251	11/10/16	11/10/16	Contig	University Miguel Hernandez	SAMN05219218	GCA_001874155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/155/GCA_001874155.1_ASM187415v1	27446036	-
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.56167	60.8	-	DCZQ01	47	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457485	GCA_002331645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/645/GCA_002331645.1_ASM233164v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.45384	67.4	-	LOZG01	89	6787	6442	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449316	GCA_001527405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/405/GCA_001527405.1_ASM152740v1	-	MSMB2060
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	4.01077	38.7	-	MDHW01	299	3984	3696	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022857	GCA_001706565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/565/GCA_001706565.1_ASM170656v1	-	UKK-0327
Citrobacter freundii	546	PRJNA297498	297498	Proteobacteria	Gammaproteobacteria	5.23189	51.5	-	LLJO01	54	5184	4922	12/24/15	4/5/17	Scaffold	Statens Serum Institut	SAMN04124434	GCA_001482545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/545/GCA_001482545.1_ASM148254v1	-	AMA 754
Enterobacter hormaechei	158836	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.91638	55.1	-	JZZN01	73	4807	4575	3/19/15	3/25/17	Contig	JCVI	SAMN03283635	GCA_000957945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/945/GCA_000957945.1_ASM95794v1	-	35032
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.32323	55	-	LRCC01	178	5392	4979	1/19/16	4/6/17	Contig	JCVI	SAMN04407769	GCA_001518055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/055/GCA_001518055.1_ASM151805v1	-	GN02761
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.92206	64.1	-	FSER01	28	4896	4717	12/14/16	3/21/17	Scaffold	SC	SAMEA2259651	GCA_900134275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/275/GCA_900134275.1_11893_6_13	-	846
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.21318	67	-	LPHI01	70	7607	7267	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449534	GCA_001531525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/525/GCA_001531525.1_ASM153152v1	-	MSMB2099WGS
Pseudomonas sp. HMSC058A10	1715163	PRJNA296291	296291	Proteobacteria	Gammaproteobacteria	6.37792	66.4	-	LTIT01	95	6050	5847	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477555	GCA_001809935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/809/935/GCA_001809935.1_ASM180993v1	-	HMSC058A10
Streptomyces sp. CNS654	1506995	PRJNA239507	239507	Terrabacteria group	Actinobacteria	8.34075	71.7	-	JNLT01	84	7327	6905	6/11/14	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02841233	GCA_000702365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/702/365/GCA_000702365.1_ASM70236v1	-	CNS654
Bacillus sp. M 2-6	1177926	PRJNA161543	161543	Terrabacteria group	Firmicutes	3.79565	41.1	-	AJWW01	67	3964	3832	5/23/12	4/7/17	Contig	"Chunlab, Inc."	SAMN02469599	GCA_000264255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/255/GCA_000264255.1_ASM26425v1	23209247	KACC 16563
Acinetobacter sp. 479375	1310601	PRJNA194677	194677	Proteobacteria	Gammaproteobacteria	3.45622	40.1	-	JEZN01	81	3393	3116	2/25/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02371044	GCA_000581715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/715/GCA_000581715.1_ASM58171v1	-	479375
Sphingomonas sp. CCH13-B11	1768791	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	3.65828	66.8	-	LSKP01	135	3562	3376	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299492	GCA_001557105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/105/GCA_001557105.1_ASM155710v1	-	CCH13-B11
Clostridium sp. CAG:7	1262832	PRJEB981	206719	Terrabacteria group	Firmicutes	3.32157	44	-	CAYE01	104	2939	2911	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138456	GCA_000431375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/375/GCA_000431375.1_MGS7	-	-
Rhodococcus sp. 06-462-5	2022484	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.76004	64.7	-	NOYD01	61	5408	5241	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376354	GCA_002258315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/315/GCA_002258315.1_ASM225831v1	-	06-462-5
Enterobacter cloacae complex sp. 44246	1870940	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.08641	56	-	JZXZ01	104	5103	4844	3/19/15	4/10/17	Contig	JCVI	SAMN03283679	GCA_000958285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/285/GCA_000958285.1_ASM95828v1	-	44246
Staphylococcus sp. HMSC078B01	1739506	PRJNA300156	300156	Terrabacteria group	Firmicutes	2.44113	32.6	-	LTTQ01	106	2391	2280	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480423	GCA_001815075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/075/GCA_001815075.1_ASM181507v1	-	HMSC078B01
Corynebacterium sp. HMSC068G04	1739497	PRJNA300147	300147	Terrabacteria group	Actinobacteria	2.79352	60.9	-	LTTZ01	67	2600	2438	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480414	GCA_001814885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/885/GCA_001814885.1_ASM181488v1	-	HMSC068G04
Arthrobacter sp. ok909	1761746	PRJEB16301	348901	Terrabacteria group	Actinobacteria	5.18896	66.2	-	FNJS01	79	4759	4442	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487914	GCA_900104405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/405/GCA_900104405.1_IMG-taxon_2609459742_annotated_assembly	-	OK909
Streptococcus sp. HMSC034E12	1715053	PRJNA296181	296181	Terrabacteria group	Firmicutes	1.9783	38.6	-	LTRX01	65	1988	1802	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498581	GCA_001835915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/915/GCA_001835915.1_ASM183591v1	-	HMSC034E12
Mycobacterium sp. 852014-50255_SCH5639931	1834112	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.38219	67.5	-	LZSV01	48	5063	4887	6/17/16	4/12/17	Contig	JCVI	SAMN04691973	GCA_001665605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/605/GCA_001665605.1_ASM166560v1	-	852014-50255_SCH5639931
Prevotella sp. AG:487_50_53	1897014	PRJNA321218	321218	FCB group	Bacteroidetes/Chlorobi group	2.96356	49.2	-	MNQZ01	26	2302	2207	12/23/16	12/23/16	Scaffold	None	SAMN05717231	GCA_001915685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/685/GCA_001915685.1_ASM191568v1	27819664	-
Paenibacillus sp. 32352	1969111	PRJNA375976	375976	Terrabacteria group	Firmicutes	7.93603	49.3	-	MZNT01	74	7077	6888	3/20/17	3/22/17	Contig	University of Georgia	SAMN06349019	GCA_002042965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/965/GCA_002042965.1_ASM204296v1	-	32352
uncultured Ruminococcus sp.	165186	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.34149	44	-	FMHD01	59	3009	2957	8/16/16	8/16/16	Scaffold	SC	SAMEA3545354	GCA_900066615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/615/GCA_900066615.1_14207_7_13	-	-
Prochlorococcus sp. scB243_495G23	1471470	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.45295	31.3	-	JFLU01	387	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671341	GCA_000634815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/815/GCA_000634815.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. S0112	1895640	PRJNA341058	341058	Proteobacteria	delta/epsilon subdivisions	1.53304	32.3	-	MJLS01	18	1594	1524	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687078	GCA_002139185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/185/GCA_002139185.1_ASM213918v1	28854596	S0112
Rhizobium sp. Leaf311	1736332	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.84775	57.1	-	LMNZ01	25	4551	4401	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151722	GCA_001423445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/423/445/GCA_001423445.1_Leaf311	26633631	Leaf311
Mesorhizobium sp. WSM4313	2029412	PRJNA399611	399611	Proteobacteria	Alphaproteobacteria	6.32805	63.3	-	NSFT01	46	6200	5874	9/12/17	9/14/17	Contig	Curtin University	SAMN07540851	GCA_002294725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/725/GCA_002294725.1_ASM229472v1	-	WSM4313
uncultured Microbacterium sp.	191216	PRJEB13036	386643	Terrabacteria group	Actinobacteria	3.1413	70.9	-	FLQR01	13	3123	3062	5/15/17	5/15/17	Contig	Genoscope CEA	SAMEA3906799	GCA_900078385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/385/GCA_900078385.1_MIPYR_PRJEB13036_v1	-	-
Bacillus velezensis	492670	PRJNA398655	398655	Terrabacteria group	Firmicutes	4.29153	45.9	-	NQXV01	86	4347	4149	8/29/17	8/30/17	Contig	The Ohio State University	SAMN07514823	GCA_002276265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/265/GCA_002276265.1_ASM227626v1	-	GF610
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.80002	57	-	FXRI01	105	5870	5508	4/28/17	5/6/17	Scaffold	SC	SAMEA2609513	GCA_900181865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/865/GCA_900181865.1_14936_2_43	-	3189STDY5864896
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.7653	32.3	-	FQKK01	14	2749	2579	11/23/16	4/5/17	Scaffold	SC	SAMEA3449086	GCA_900126645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/645/GCA_900126645.1_17175_3_30	-	3688STDY6125078
Xanthomonas phaseoli pv. phaseoli	317013	PRJNA272626	272626	Proteobacteria	Gammaproteobacteria	5.15389	64.8	-	JXLV02	169	4694	4146	1/23/15	4/3/17	Contig	University of Exeter	SAMN03284613	GCA_000827975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/827/975/GCA_000827975.2_XCP123v2	26500625	XCP123
Xanthomonas phaseoli pv. dieffenbachiae	92828	PRJNA255351	255351	Proteobacteria	Gammaproteobacteria	5.03012	64.9	-	JPYI02	105	4439	4009	10/21/15	4/11/17	Contig	Institute for Agricultural and Fisheries Research (ILVO)	SAMN02918009	GCA_001401535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/535/GCA_001401535.2_ASM140153v2	-	LMG 25940
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79571	32.3	-	FQKM01	14	2801	2626	11/23/16	4/6/17	Scaffold	SC	SAMEA3449089	GCA_900126675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/675/GCA_900126675.1_17175_3_33	-	3688STDY6125081
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.80194	57	-	FXRL01	111	5870	5514	4/28/17	5/6/17	Scaffold	SC	SAMEA2609518	GCA_900181885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/885/GCA_900181885.1_14936_2_46	-	3189STDY5864899
Bacillus velezensis	492670	PRJNA290530	290530	Terrabacteria group	Firmicutes	4.03936	46.3	-	LHCC01	30	4008	3838	8/14/15	3/22/17	Scaffold	KRIBB	SAMN03895992	GCA_001267695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/695/GCA_001267695.1_ASM126769v1	26430040	KCTC 13012
Microbacterium sp. SCN 70-18	1660112	PRJNA279279	279279	Terrabacteria group	Actinobacteria	3.05591	70	-	MEEI01	91	2945	2755	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652455	GCA_001724385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/385/GCA_001724385.1_ASM172438v1	26031303	-
Mesorhizobium sp. WSM4304	2029408	PRJNA399611	399611	Proteobacteria	Alphaproteobacteria	7.31837	62.8	-	NSFX01	51	7137	6735	9/12/17	9/14/17	Contig	Curtin University	SAMN07540847	GCA_002294745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/745/GCA_002294745.1_ASM229474v1	-	WSM4304
Rhizobium sp. Leaf371	1736355	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	5.0859	63.6	-	LMQB01	29	4635	4465	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151745	GCA_001424045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/045/GCA_001424045.1_Leaf371	26633631	Leaf371
Campylobacter sp. P0023	1895596	PRJNA341014	341014	Proteobacteria	delta/epsilon subdivisions	1.72944	33.4	-	MJKA01	28	1784	1694	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687034	GCA_002139455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/455/GCA_002139455.1_ASM213945v1	28854596	P0023
Prochlorococcus sp. scB243_495I8	1471471	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.370192	32.4	-	JFLV01	231	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671342	GCA_000634835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/835/GCA_000634835.1_De_novo_assembly_of_single-cell_genomes	24763590	-
uncultured Ruminococcus sp.	165186	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.96503	42.3	-	FMFS01	34	2850	2799	8/16/16	8/16/16	Scaffold	SC	SAMEA3545357	GCA_900066635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/635/GCA_900066635.1_14207_7_17	-	-
Paenibacillus sp. MY03	302980	PRJNA376046	376046	Terrabacteria group	Firmicutes	9.0802	51.8	-	MXQD01	138	7226	7025	6/2/17	6/5/17	Contig	Shandong University	SAMN06349740	GCA_002165585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/585/GCA_002165585.1_ASM216558v1	-	MY03
Prevotella sp. UBA789	1947241	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.35852	45	-	DBIZ01	234	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451162	GCA_002296725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/725/GCA_002296725.1_ASM229672v1	28894102	-
Mycobacterium sp. 852014-52144_SCH5372336	1834115	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.29301	66.8	-	LZSW01	70	5097	4950	6/17/16	4/13/17	Contig	JCVI	SAMN04691977	GCA_001665615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/615/GCA_001665615.1_ASM166561v1	-	852014-52144_SCH5372336
Streptococcus sp. HMSC034F02	1715209	PRJNA296338	296338	Terrabacteria group	Firmicutes	2.1021	38.6	-	LTRW01	87	2104	1887	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498664	GCA_001835965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/965/GCA_001835965.1_ASM183596v1	-	HMSC034F02
Arthrobacter sp. cf158	1761744	PRJEB16582	349878	Terrabacteria group	Actinobacteria	5.10345	62.6	-	FNNR01	28	4715	4556	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487912	GCA_900106835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/835/GCA_900106835.1_IMG-taxon_2615840536_annotated_assembly	-	CF158
Corynebacterium sp. HMSC066C02	1739500	PRJNA300150	300150	Terrabacteria group	Actinobacteria	2.63107	60.6	-	LTTW01	54	2473	2348	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480417	GCA_001814945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/945/GCA_001814945.1_ASM181494v1	-	HMSC066C02
Staphylococcus sp. HMSC067F10	1739508	PRJNA300158	300158	Terrabacteria group	Firmicutes	2.68723	32.7	-	LTTO01	60	2727	2608	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480425	GCA_001815105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/105/GCA_001815105.1_ASM181510v1	-	HMSC067F10
Enterobacter cloacae complex sp. 42192	1870937	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.08666	55.7	-	JZYJ01	95	4949	4723	3/19/15	4/20/17	Contig	JCVI	SAMN03283659	GCA_000958425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/425/GCA_000958425.1_ASM95842v1	-	42192
Rhodococcus sp. 06-221-2	2022514	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.67924	64.5	-	NOYJ01	38	5294	5181	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376384	GCA_002258365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/365/GCA_002258365.1_ASM225836v1	-	06-221-2
Clostridium sp. CAG:632	1262830	PRJEB967	206918	Terrabacteria group	Firmicutes	2.46247	44.3	-	CAYL01	93	2252	2230	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138463	GCA_000431515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/515/GCA_000431515.1_MGS632	-	-
Sphingomonas sp. CCH9-E2	1768776	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	4.23638	66.1	-	LSJM01	472	4201	3856	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299463	GCA_001557215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/215/GCA_001557215.1_ASM155721v1	-	CCH9-E2
Acinetobacter sp. 1542444	1310681	PRJNA194757	194757	Proteobacteria	Gammaproteobacteria	3.94372	38.8	-	JEYA01	28	3823	3619	2/25/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02385033	GCA_000581835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/835/GCA_000581835.1_ASM58183v1	-	1542444
Bacillus sp. 916	1007654	PRJNA65665	65665	Terrabacteria group	Firmicutes	3.93128	46.4	-	AFSU01	139	3891	3708	7/6/12	4/17/17	Contig	"Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences"	SAMN02470110	GCA_000275785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/785/GCA_000275785.1_ASM27578v1	22965091	916
Streptomyces sp. NRRL S-118	1463881	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.92579	72.4	-	JOBL01	114	7191	6601	7/1/14	3/11/17	Scaffold	University of Illinois	SAMN02645392	GCA_000716335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/335/GCA_000716335.1_ASM71633v1	-	NRRL S-118
Pseudomonas sp. HMSC076A11	1715195	PRJNA296323	296323	Proteobacteria	Gammaproteobacteria	6.00525	66.3	-	LTIF01	76	5798	5551	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477551	GCA_001810205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/205/GCA_001810205.1_ASM181020v1	-	HMSC076A11
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.44915	66.9	-	LPID01	72	7831	7459	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449555	GCA_001531875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/875/GCA_001531875.1_ASM153187v1	-	MSMB1224WGS
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.92392	64.1	-	FSES01	23	4895	4716	12/14/16	3/21/17	Scaffold	SC	SAMEA2259652	GCA_900134285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/285/GCA_900134285.1_11893_6_14	-	847
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.35255	55	-	LRCG01	275	5517	4986	1/19/16	4/10/17	Contig	JCVI	SAMN04407774	GCA_001518115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/115/GCA_001518115.1_ASM151811v1	-	GN03482
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.95097	55.2	-	JZZM01	70	4909	4665	3/19/15	3/25/17	Contig	JCVI	SAMN03283638	GCA_000957955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/955/GCA_000957955.1_ASM95795v1	-	35034
Citrobacter freundii	546	PRJNA297498	297498	Proteobacteria	Gammaproteobacteria	5.3322	51.4	-	LLJR01	106	5357	5068	12/24/15	4/5/17	Scaffold	Statens Serum Institut	SAMN04124438	GCA_001482575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/575/GCA_001482575.1_ASM148257v1	-	AMA 948
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	3.96884	38.8	-	MDIE01	131	3910	3697	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022864	GCA_001706575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/575/GCA_001706575.1_ASM170657v1	-	UKK-0541
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.62122	67.2	-	LOZH01	92	7012	6617	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449317	GCA_001527425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/425/GCA_001527425.1_ASM152742v1	-	MSMB2061
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.30021	61.7	-	DCZP01	56	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457484	GCA_002331665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/665/GCA_002331665.1_ASM233166v1	28894102	-
Mycobacterium abscessus subsp. bolletii INCQS 00594	1087469	PRJNA85611	85611	Terrabacteria group	Actinobacteria	4.94123	64.2011	plasmid pMAB01:NC_020994.1/CP003376.1	AUVF01	84	4954	4794	9/18/13	3/15/17	Contig	Rede Paraense de Genômica e Proteômica	SAMN02471375	GCA_000363915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/915/GCA_000363915.2_MaINCQS00594_1.0	24201191	INCQS 00594
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.53578	56.7	-	NCWI01	178	4450	4179	4/24/17	4/26/17	Contig	FDA/CFSAN	SAMN06712277	GCA_002107755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/755/GCA_002107755.1_ASM210775v1	-	MOD1-cr13
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.96586	55.1	-	FKYY01	39	5787	5547	5/19/16	2/25/17	Scaffold	SC	SAMEA2273591	GCA_900083975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/975/GCA_900083975.1_12045_6_58	-	2880STDY5682506
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.86209	55	-	JVBX01	105	4640	4501	7/10/15	3/26/17	Contig	University of Washington	SAMN03197765	GCA_001055365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/365/GCA_001055365.1_ASM105536v1	26230489	565_ECLO
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.4813	32.7	-	CUCQ01	86	2459	2340	3/31/15	3/26/17	Contig	SC	SAMEA1035076	GCA_001238745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/745/GCA_001238745.1_7067_4_32	-	25-63
Propionibacterium acnes J139	679194	PRJNA40679	40679	Terrabacteria group	Actinobacteria	2.48196	60	-	ADFS01	7	2474	2256	12/30/09	3/30/17	Contig	JCVI	SAMN00015387	GCA_000177395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/395/GCA_000177395.1_ASM17739v1	-	J139
Burkholderia sp. HI2500	2015358	PRJNA391085	391085	Proteobacteria	Betaproteobacteria	8.26538	66.9	-	NKFL01	28	7598	7307	7/20/17	7/22/17	Contig	University of Michigan	SAMN07257393	GCA_002223055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/055/GCA_002223055.1_ASM222305v1	-	HI2500
Campylobacter coli BIGS0018	1247741	PRJNA177352	177352	Proteobacteria	delta/epsilon subdivisions	1.61803	31.6	-	ANHC01	206	1758	1571	11/23/12	3/15/17	Contig	Swansea University	SAMN01795902	GCA_000314365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/365/GCA_000314365.1_ASM31436v1	23279096	BIGS0018
Lactobacillus plantarum	1590	PRJNA314030	314030	Terrabacteria group	Firmicutes	3.19469	44.5	-	LUWN01	83	3089	2945	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04528200	GCA_001633285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/285/GCA_001633285.1_ASM163328v1	-	CNW10
Serratia marcescens	615	PRJNA381643	381643	Proteobacteria	Gammaproteobacteria	5.10796	60	-	NBWV01	27	4860	4697	4/21/17	4/26/17	Contig	UCLA Clinical Microbiology Laboratory	SAMN06685770	GCA_002104095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/095/GCA_002104095.1_ASM210409v1	-	D-3
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.51535	46.8	-	CPXH01	122	4260	4014	3/23/15	3/26/17	Scaffold	SC	SAMEA980133	GCA_001090445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/445/GCA_001090445.1_4976_6_8	-	ERL032501
Corynebacterium diphtheriae	1717	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.4645	53.5	-	MSIN01	41	2390	2202	6/20/17	6/22/17	Contig	Northumbria University	SAMN06174245	GCA_002201065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/065/GCA_002201065.1_ASM220106v1	-	4905
Lactobacillus johnsonii N6.2	1408186	PRJNA222774	222774	Terrabacteria group	Firmicutes	1.88725	34.5	chromosome:NC_022909.1/CP006811.1	-	1	1788	1660	11/25/13	4/2/17	Complete Genome	University of Florida	SAMN02641596	GCA_000498675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/675/GCA_000498675.1_ASM49867v1	24812223	N6.2
Brucella melitensis bv. 2 str. 63/9	520465	PRJNA33577	33577	Proteobacteria	Alphaproteobacteria	3.28495	57.2	-	ACEM01	60	3353	3136	2/18/09	3/30/17	Contig	Broad Institute	SAMN02595294	GCA_000182235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/182/235/GCA_000182235.1_ASM18223v1	-	63/9
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.93447	46.6	-	JTIM01	81	3008	2809	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196638	GCA_001657055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/055/GCA_001657055.1_ASM165705v1	-	Lrh18
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.38758	40.2	-	LQEA01	38	2291	2187	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366522	GCA_001930385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/385/GCA_001930385.1_ASM193038v1	-	2428PM
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12068	41.2	-	CVYA01	76	2062	1880	6/23/15	3/26/17	Contig	SC	SAMEA1032842	GCA_001176505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/505/GCA_001176505.1_6817_2_90	-	EQUI0043
Stenotrophomonas maltophilia	40324	PRJNA390523	390523	Proteobacteria	Gammaproteobacteria	4.48463	66.6	-	NIVX01	119	4135	3988	6/22/17	6/26/17	Contig	JCVI	SAMN07237146	GCA_002205215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/215/GCA_002205215.1_ASM220521v1	-	594
Enterococcus faecium 506	1134807	PRJNA82001	82001	Terrabacteria group	Firmicutes	2.80466	37.8	-	AMBK01	194	2871	2708	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299482	GCA_000295495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/495/GCA_000295495.2_ASM29549v2	-	506
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14554	52.4	-	CQKA01	71	2506	2183	3/23/15	4/11/17	Contig	SC	SAMEA1690388	GCA_001088485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/485/GCA_001088485.1_8289_2_35	-	GCGS035
Streptococcus mutans TCI-99	1074112	PRJNA71975	71975	Terrabacteria group	Firmicutes	1.81479	37	-	AGNA01	132	1844	1737	10/6/11	3/22/17	Contig	J. Craig Venter Institute	SAMN02436527	GCA_000230225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/225/GCA_000230225.2_SMUT4-NEX_1-99	-	TCI-99
Enterococcus faecalis ERV68	1134795	PRJNA81979	81979	Terrabacteria group	Firmicutes	3.13475	37.3	-	ALZT01	100	3253	3099	8/27/12	3/27/17	Scaffold	Washington University	SAMN02299471	GCA_000294205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/205/GCA_000294205.2_ASM29420v2	-	ERV68
Clostridium botulinum	1491	PRJNA239370	239370	Terrabacteria group	Firmicutes	3.86898	28.2	-	JFGE01	524	3797	3116	7/18/14	3/24/17	Contig	Centers for Disease Control and Prevention	SAMN02664952	GCA_000730805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/805/GCA_000730805.1_ASM73080v1	25031122	CDC52298
Carnobacterium maltaromaticum LMA28	1234679	PRJEB544	177106	Terrabacteria group	Firmicutes	3.65042	34.5	chromosome:NC_019425.2/HE999757.2	-	1	3497	3299	11/9/12	4/1/17	Complete Genome	LIBio	SAMEA2272423	GCA_000317975.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/975/GCA_000317975.2_ASM31797v2	23405327	LMA28
Bacillus subtilis S1-4	1230477	PRJNA174581	174581	Terrabacteria group	Firmicutes	4.45405	43.0944	plasmid pSU01:NZ_ANIP01000001.1/ANIP01000001.1	ANIP01	104	4834	4503	12/31/12	5/18/17	Contig	Sichuan University	SAMN02470985	GCA_000340295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/295/GCA_000340295.1_ASM34029v1	24072866	S1-4
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.24573	45.2	-	LQCB01	35	5110	4870	4/4/16	3/19/17	Scaffold	Health Canada	SAMN04377087	GCA_001609555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/555/GCA_001609555.1_ASM160955v1	-	Apr-92
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.9217	37.9	-	MLMP01	264	2018	1757	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297055	GCA_001867875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/875/GCA_001867875.1_ASM186787v1	27118061	AWRIB342
Xanthomonas oryzae pv. oryzae	64187	PRJNA269410	269410	Proteobacteria	Gammaproteobacteria	4.27161	63.9	-	JXEG01	416	4255	3427	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252509	GCA_001928255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/255/GCA_001928255.1_ASM192825v1	-	BXO582
Xanthomonas citri subsp. citri	611301	PRJEB7194	265972	Proteobacteria	Gammaproteobacteria	5.27935	64.7	-	CDAI01	943	5097	4265	11/4/14	4/2/17	Contig	CIRAD	SAMEA2827236	GCA_000825405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/405/GCA_000825405.1_XACLE3	-	LE3-1
Brucella abortus NI422	1160168	PRJNA173562	173562	Proteobacteria	Alphaproteobacteria	3.2863	57.2	-	AQJV01	4	3377	3156	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00811191	GCA_000370525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/525/GCA_000370525.1_Bruc_abor_NI422_V1	-	NI422
Francisella tularensis	263	PRJNA253522	253522	Proteobacteria	Gammaproteobacteria	1.85385	32.3	-	JPMM01	94	2003	1564	2/25/16	4/5/17	Contig	Swedish Defence Research Agency	SAMN02870476	GCA_001574775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/775/GCA_001574775.1_ASM157477v1	-	NO-2/2011
Clostridioides difficile CD45	1151268	PRJNA85709	85709	Terrabacteria group	Firmicutes	4.36791	28.4	-	AVGY01	176	4214	3954	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766618	GCA_000449065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/065/GCA_000449065.2_ASM44906v2	-	CD45
Vibrio cholerae HE-16	991999	PRJNA64005	64005	Proteobacteria	Gammaproteobacteria	3.91139	47.2	-	ALEB01	236	3736	3477	10/4/12	3/23/17	Scaffold	Institute for Genome Sciences	SAMN00622032	GCA_000303085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/085/GCA_000303085.1_ASM30308v1	-	HE-16
Bacillus thuringiensis serovar amagiensis	180884	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.24213	35.1	-	NFCH01	209	6640	6106	5/17/17	6/15/17	Contig	Huazhong Agricultural University	SAMN05934491	GCA_002146315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/315/GCA_002146315.1_ASM214631v1	-	BGSC 4AE1
Chlamydia trachomatis L2b/CV204	1071776	PRJEA71113	71113	PVC group	Chlamydiae	1.04638	41.2634	chromosome:NC_020976.1/HE601960.1; plasmid pL2bCV204:NC_020955.1/HE603225.1	-	2	974	899	3/13/12	3/23/17	Chromosome	Sanger Institute	SAMEA2271980	GCA_000318965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/965/GCA_000318965.1_ASM31896v1	22406642	L2b/CV204
Burkholderia pseudomallei	28450	PRJNA352974	352974	Proteobacteria	Betaproteobacteria	7.265	68.0481	chromosome 1:NZ_CP018375.1/CP018375.1; chromosome 2:NZ_CP018376.1/CP018376.1	-	2	7462	6792	4/26/17	5/1/17	Chromosome	Centers for Disease Control and Prevention	SAMN06007558	GCA_002110925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/925/GCA_002110925.1_ASM211092v1	-	2002721684
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.07112	67	-	MURT01	161	7752	7268	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001857	GCA_001991915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/915/GCA_001991915.1_ASM199191v1	-	VC7233
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.17574	38.5	-	NGQA01	97	2152	1936	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848378	GCA_002254175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/175/GCA_002254175.1_ASM225417v1	-	105d
Bacteroides fragilis str. S23L17	1339329	PRJNA206172	206172	FCB group	Bacteroidetes/Chlorobi group	5.33342	43.4	-	JHEF01	133	4844	4492	3/26/14	4/18/17	Contig	IGS	SAMN02315067	GCA_000601055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/055/GCA_000601055.1_ASM60105v1	-	S23L17
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.39888	50.5	-	NPZN01	181	5661	5206	8/11/17	8/15/17	Contig	JCVI	SAMN07450570	GCA_002246195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/195/GCA_002246195.1_ASM224619v1	-	ECCRETH05
Legionella pneumophila	446	PRJNA280929	280929	Proteobacteria	Gammaproteobacteria	3.71153	38.3	-	LAXO01	41	3398	3237	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03480743	GCA_001582145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/145/GCA_001582145.1_ASM158214v1	26888563	JNLH86
Pseudomonas syringae CC1513	1357275	PRJNA211395	211395	Proteobacteria	Gammaproteobacteria	5.72503	57.9	-	AVEL02	164	5354	5081	8/20/13	3/24/17	Contig	University of Arizona	SAMN02471573	GCA_000452765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/765/GCA_000452765.2_CC1513_092313_2.0	24459267	CC1513
Streptococcus suis YS27	1214195	PRJNA171458	171458	Terrabacteria group	Firmicutes	2.42529	41.2	-	ALMK01	134	2422	2244	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469512	GCA_000441155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/155/GCA_000441155.1_version1	-	YS27
Streptococcus agalactiae GB00083	1154898	PRJNA86469	86469	Terrabacteria group	Firmicutes	2.07303	35.2	-	ALSS01	21	2140	2025	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991156	GCA_000288255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/255/GCA_000288255.1_ASM28825v1	-	GB00083
Acinetobacter baumannii 6013150	525243	PRJNA33071	33071	Proteobacteria	Gammaproteobacteria	3.98724	38.9	-	ACYQ02	202	3891	3756	9/29/09	6/15/17	Scaffold	WUGSC	SAMN00189091	GCA_000163355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/355/GCA_000163355.2_ASM16335v2	-	6013150
Psychroflexus torquis ATCC 700755	313595	PRJNA13542	13542	FCB group	Bacteroidetes/Chlorobi group	4.32183	34.5	chromosome:NC_018721.1/CP003879.1	-	1	3808	3574	10/9/12	5/19/17	Complete Genome	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02603919	GCA_000153485.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/485/GCA_000153485.2_ASM15348v2	-	ATCC 700755
Bifidobacterium longum subsp. longum 1-5B	1350471	PRJNA209580	209580	Terrabacteria group	Actinobacteria	2.36751	60.1	-	JNVX01	25	2062	1929	7/16/14	4/2/17	Scaffold	Pirogov Russian National Research Medical University	SAMN02862991	GCA_000730105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/105/GCA_000730105.1_ASM73010v1	-	1-5B
Shigella flexneri	623	PRJNA385907	385907	Proteobacteria	Gammaproteobacteria	4.7001	50.5	-	NGVW01	486	5365	4257	6/6/17	8/4/17	Contig	Christian Medical College	SAMN06920488	GCA_002174525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/525/GCA_002174525.1_ASM217452v1	-	FC1481
Bacillus anthracis str. Sen2Col2	1297866	PRJEB1516	191078	Terrabacteria group	Firmicutes	5.17411	35.2	-	CAVC01	44	5818	5457	3/28/13	5/18/17	Contig	URMITE	SAMEA2272511	GCA_000359425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/425/GCA_000359425.1_ASM35942v1	-	Sen2Col2
Pseudomonas putida	303	PRJNA343876	343876	Proteobacteria	Gammaproteobacteria	5.1401	62.2	-	MJVE01	2899	5029	3536	11/2/16	11/2/16	Scaffold	Central Research Institute for Dryland Agriculture	SAMN05804792	GCA_001865225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/225/GCA_001865225.1_ASM186522v1	-	P1
Leptospira interrogans str. Fiocruz LV4117	1291365	PRJNA188992	188992	Spirochaetes	Spirochaetia	4.6056	35	-	AOVY01	130	4119	3742	3/1/13	5/18/17	Contig	J. Craig Venter Institute	SAMN01919803	GCA_000343145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/145/GCA_000343145.1_CA_glsol097	-	Fiocruz LV4117
Streptococcus pyogenes ABC020015292	1439016	PRJNA233227	233227	Terrabacteria group	Firmicutes	1.89405	38.5	-	JJFT01	2	1973	1844	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567576	GCA_000630005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/005/GCA_000630005.1_Stre_pyog_ABC020015292_V1	-	ABC020015292
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.1935	51.8	chromosome:NZ_CP016884.1/CP016884.1	-	1	2543	2204	8/11/16	3/21/17	Chromosome	Centers for Disease Control and Prevention	SAMN04883388	GCA_001703755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/703/755/GCA_001703755.1_ASM170375v1	-	M22797
Helicobacter cetorum MIT 00-7128	182217	PRJNA97501	97501	Proteobacteria	delta/epsilon subdivisions	1.96011	34.5	chromosome:NC_017737.1/CP003479.1; plasmid pHCW:NC_017738.1/CP003480.1	-	2	1795	1701	4/19/12	4/7/17	Complete Genome	"Dept. Molec. Microbiology, Washington University Medical School in Saint Louis"	SAMN02603199	GCA_000259255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/255/GCA_000259255.1_ASM25925v1	-	MIT 00-7128
Streptococcus pneumoniae	1313	PRJNA229402	229402	Terrabacteria group	Firmicutes	2.11455	39.7	-	JFJC01	90	2257	1980	10/2/14	3/6/17	Scaffold	Harvard Medical School / Massachusetts Eye and Ear Infirmary	SAMN02641371	GCA_000762805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/805/GCA_000762805.1_Sp_3508.v1.0	-	ECC_3508
Thermoanaerobacter brockii subsp. finnii Ako-1	509193	PRJNA32585	32585	Terrabacteria group	Firmicutes	2.34482	34.5	chromosome:NC_014964.1/CP002466.1	-	1	2367	2219	1/24/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713580	GCA_000175295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/295/GCA_000175295.2_ASM17529v2	-	Ako-1
Mycobacterium tuberculosis TRS21	1334067	PRJNA203179	203179	Terrabacteria group	Actinobacteria	4.41153	65.3	chromosome:NZ_CP009176.1/CP009176.1	-	1	4328	4080	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837641	GCA_001997935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/935/GCA_001997935.1_ASM199793v1	27261264	TRS21
Haemophilus influenzae	727	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	2.07802	39.4	-	JUQZ01	52	2032	1932	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198049	GCA_001058575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/575/GCA_001058575.1_ASM105857v1	26230489	841_HINF
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.44912	68.9	-	BDMX01	326	5204	4852	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076682	GCA_002089155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/155/GCA_002089155.1_ASM208915v1	28045086	DH-5
Lactococcus lactis subsp. cremoris	1359	PRJNA286840	286840	Terrabacteria group	Firmicutes	2.39396	35.5	-	LIYE01	311	2469	2115	4/18/16	4/5/17	Contig	Radboudumc	SAMN03770943	GCA_001622215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/215/GCA_001622215.1_ASM162221v1	-	HP
Bacillus cereus VD156	1053239	PRJNA70445	70445	Terrabacteria group	Firmicutes	6.4213	34.9	-	AHFH01	15	6753	6242	8/15/12	5/18/17	Scaffold	Broad Institute	SAMN02596871	GCA_000290775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/775/GCA_000290775.1_Baci_cere_VD156_V1	-	VD156
Staphylococcus epidermidis AG42	1458470	PRJNA237256	237256	Terrabacteria group	Firmicutes	2.56773	32.1	-	JNLI01	9	2548	2333	6/11/14	3/24/17	Contig	DOE Joint Genome Institute	SAMN02841207	GCA_000703025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/025/GCA_000703025.1_ASM70302v1	-	AG42
Thermoanaerobacter sp. X513	573062	PRJNA32613	32613	Terrabacteria group	Firmicutes	2.45652	34.5	chromosome:NC_014538.1/CP002210.1	-	1	2482	2336	9/23/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00017482	GCA_000148425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/425/GCA_000148425.1_ASM14842v1	-	X513
Yersinia pestis subsp. microtus bv. Altaica	385967	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.65141	47.6	-	NHYI01	211	4434	4121	6/6/17	6/8/17	Scaffold	SRCAMB	SAMN05521428	GCA_002173805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/805/GCA_002173805.1_ASM217380v1	-	SCPM-O-DNA-03
Pseudomonas fluorescens	294	PRJNA394120	394120	Proteobacteria	Gammaproteobacteria	6.15123	60.2	-	NNBS01	607	5497	5326	8/22/17	8/24/17	Contig	New England College	SAMN07349398	GCA_002263675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/675/GCA_002263675.1_ASM226367v1	-	SC1
Thermoanaerobacter pseudethanolicus ATCC 33223	340099	PRJNA13901	13901	Terrabacteria group	Firmicutes	2.36282	34.5	chromosome:NC_010321.1/CP000924.1	-	1	2379	2233	2/5/08	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598314	GCA_000019085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/085/GCA_000019085.1_ASM1908v1	-	ATCC 33223; 39E
Thermoanaerobacter sp. X514	399726	PRJNA16394	16394	Terrabacteria group	Firmicutes	2.45726	34.5	chromosome:NC_010320.1/CP000923.1	-	1	2479	2329	2/5/08	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN00623066	GCA_000019065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/065/GCA_000019065.1_ASM1906v1	-	X514
Sulfurimonas denitrificans DSM 1251	326298	PRJNA13019	13019	Proteobacteria	delta/epsilon subdivisions	2.20156	34.5	chromosome:NC_007575.1/CP000153.1	-	1	2196	2133	11/1/05	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598289	GCA_000012965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/965/GCA_000012965.1_ASM1296v1	18065616	DSM 1251
Lactobacillus johnsonii FI9785	633699	PRJEA36575	36575	Terrabacteria group	Firmicutes	1.78512	34.4436	chromosome:NC_013504.1/FN298497.1; plasmid p9785L:NC_013505.1/FN357112.1; plasmid p9785S:NC_012552.1/AY862141.1	-	3	1765	1581	11/4/09	3/30/17	Complete Genome	Institute of Food Research	SAMEA2272487	GCA_000091405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/091/405/GCA_000091405.1_ASM9140v1	"149,620,401,612,256,000,000,000"	FI9785
Lactobacillus lindneri	53444	PRJNA290141	290141	Terrabacteria group	Firmicutes	1.45243	34.4408	chromosome:NZ_CP014907.1/CP014907.1; plasmid pL1481-1:NZ_CP014908.1/CP014908.1; plasmid pL1481-2:NZ_CP014909.1/CP014909.1; plasmid pL1481-3:NZ_CP014910.1/CP014910.1; plasmid pL1481-4:NZ_CP014911.1/CP014911.1	-	5	1480	1343	8/10/16	4/13/17	Complete Genome	Technische Universitaet Muenchen	SAMN04505733	GCA_001702135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/702/135/GCA_001702135.1_ASM170213v1	-	TMW 1.481
Winogradskyella sp. J14-2	1936080	PRJNA362240	362240	FCB group	Bacteroidetes/Chlorobi group	3.34967	34.4	chromosome:NZ_CP019388.1/CP019388.1	-	1	3019	2942	1/26/17	4/17/17	Complete Genome	Korea Research Institute of Bioscience & Biotechnology	SAMN06236788	GCA_001971725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/725/GCA_001971725.1_ASM197172v1	-	J14-2
Pseudomonas fluorescens	294	PRJNA407797	407797	Proteobacteria	Gammaproteobacteria	6.0479	60.3	-	NXHE01	89	5484	5350	10/2/17	10/2/17	Contig	University of British Columbia	SAMN07703429	GCA_002407625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/407/625/GCA_002407625.1_ASM240762v1	-	CH229
Yersinia pestis subsp. microtus bv. Altaica	385967	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.64198	47.6	-	NHYH01	181	4408	4105	6/6/17	6/8/17	Scaffold	SRCAMB	SAMN05521426	GCA_002173815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/815/GCA_002173815.1_ASM217381v1	-	SCPM-O-DNA-01
Lactobacillus jensenii	109790	PRJNA357991	357991	Terrabacteria group	Firmicutes	1.67295	34.4	chromosome:NZ_CP018809.1/CP018809.1	-	1	1626	1509	1/5/17	4/6/17	Complete Genome	"KoBioLabs, Inc."	SAMN06163224	GCA_001936235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/235/GCA_001936235.1_ASM193623v1	-	SNUV360
Staphylococcus epidermidis	1282	PRJNA238030	238030	Terrabacteria group	Firmicutes	2.39319	32	-	JMIF01	45	2356	2214	6/12/14	3/24/17	Contig	IMMH Institute for medical microbiology and hygiene	SAMN02640611	GCA_000705035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/035/GCA_000705035.1_SE8400	-	8400
Bacillus cereus VD154	1053238	PRJNA70443	70443	Terrabacteria group	Firmicutes	6.30559	35.4	-	AHFG01	19	6648	6148	8/15/12	6/19/17	Scaffold	Broad Institute	SAMN02596870	GCA_000290795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/795/GCA_000290795.1_Baci_cere_VD154_V1	-	VD154
Lactococcus lactis subsp. cremoris	1359	PRJNA286840	286840	Terrabacteria group	Firmicutes	2.54895	35.4	-	LIYG01	103	2567	2341	4/18/16	4/5/17	Contig	Radboudumc	SAMN03770949	GCA_001622225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/225/GCA_001622225.1_ASM162222v1	-	V4
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.89535	68.6	-	BDMY01	537	5753	5325	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076652	GCA_002089175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/175/GCA_002089175.1_ASM208917v1	28045086	DH-6
Haemophilus influenzae	727	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.98658	39.4	-	JUTE01	45	1953	1830	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197992	GCA_001059125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/125/GCA_001059125.1_ASM105912v1	26230489	781_HINF
Mycobacterium tuberculosis TRS19	1334065	PRJNA203177	203177	Terrabacteria group	Actinobacteria	4.41153	65.5	chromosome:NZ_CP009177.1/CP009177.1	-	1	4296	4089	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837639	GCA_001997975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/975/GCA_001997975.1_ASM199797v1	27261264	TRS19
Maribacter sp. T28	1836467	PRJNA357344	357344	FCB group	Bacteroidetes/Chlorobi group	4.27116	34.4	chromosome:NZ_CP018760.1/CP018760.1	-	1	3704	3606	12/21/16	4/16/17	Complete Genome	Xiamen University	SAMN04633439	GCA_001913155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/155/GCA_001913155.1_ASM191315v1	-	T28
Streptococcus pneumoniae TIGR4	170187	PRJNA13923	13923	Terrabacteria group	Firmicutes	2.0168	39.6	-	AAGY02	218	2144	1987	6/1/05	3/9/17	Contig	"454 Life Sciences Corporation, USA, Branford"	SAMN02363423	GCA_000167615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/615/GCA_000167615.1_ASM16761v1	16056220	TIGR4
Flavobacterium communis	1306519	PRJNA343870	343870	FCB group	Bacteroidetes/Chlorobi group	3.85121	34.4	chromosome:NZ_CP017774.1/CP017774.1	-	1	3242	3125	10/31/16	4/13/17	Complete Genome	Chungnam National University	SAMN05804760	GCA_001857965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/965/GCA_001857965.1_ASM185796v1	-	PK15
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.21132	51.6	chromosome:NZ_CP016886.1/CP016886.1	-	1	2567	2214	8/11/16	3/21/17	Chromosome	Centers for Disease Control and Prevention	SAMN04883411	GCA_001703775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/703/775/GCA_001703775.1_ASM170377v1	-	M25074
Streptococcus pyogenes ABC020015285	1439015	PRJNA233226	233226	Terrabacteria group	Firmicutes	1.87215	38.4	-	JJFU01	6	1906	1790	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567575	GCA_000630025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/025/GCA_000630025.1_Stre_pyog_ABC020015285_V1	-	ABC020015285
Leptospira interrogans serovar Icterohaemorrhagiae str. RGA	1291351	PRJNA188999	188999	Spirochaetes	Spirochaetia	4.60002	35	-	AOVR01	143	4122	3733	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920605	GCA_000343165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/165/GCA_000343165.1_CA_glsol113	-	RGA
Pseudomonas putida	303	PRJNA264399	264399	Proteobacteria	Gammaproteobacteria	6.76743	57.7	-	JSVW01	49	-	-	12/14/16	12/14/16	Scaffold	Texas A&M University	SAMN03145386	GCA_001904555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/555/GCA_001904555.1_ASM190455v1	-	A514
Bacillus anthracis str. Sen3	1297867	PRJEB1517	191160	Terrabacteria group	Firmicutes	5.17379	35.2	-	CAVD01	50	5803	5434	3/28/13	5/18/17	Contig	URMITE	SAMEA2272292	GCA_000359445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/445/GCA_000359445.1_ASM35944v1	-	Sen3
Shigella flexneri	623	PRJNA385907	385907	Proteobacteria	Gammaproteobacteria	4.61262	50.7	-	NGVZ01	578	5232	4142	6/6/17	8/4/17	Contig	Christian Medical College	SAMN06920485	GCA_002174575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/575/GCA_002174575.1_ASM217457v1	-	FC470
Bifidobacterium longum subsp. infantis EK3	1457183	PRJNA236798	236798	Terrabacteria group	Actinobacteria	2.56481	59.4	-	JNWB01	38	2343	2081	7/16/14	4/2/17	Scaffold	Pirogov Russian National Research Medical University	SAMN02862995	GCA_000730125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/125/GCA_000730125.1_ASM73012v1	-	EK3
Ilyobacter polytropus DSM 2926	572544	PRJNA32577	32577	Fusobacteria	Fusobacteriia	3.13231	34.3553	chromosome:NC_014632.1/CP002281.1; plasmid pILYOP01:NC_014633.1/CP002282.1; plasmid pILYOP02:NC_014634.1/CP002283.1	-	3	3017	2887	10/22/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00116458	GCA_000165505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/165/505/GCA_000165505.1_ASM16550v1	21304735	DSM 2926
Acinetobacter baumannii 6013113	592014	PRJNA33017	33017	Proteobacteria	Gammaproteobacteria	3.99904	38.9	-	ACYR02	118	3876	3685	9/29/09	3/15/17	Scaffold	WUGSC	SAMN00189090	GCA_000163375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/375/GCA_000163375.2_ASM16337v2	-	6013113
Streptococcus agalactiae GB00247	1154912	PRJNA86497	86497	Terrabacteria group	Firmicutes	2.00429	35.2	-	ALTG01	16	2046	1934	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991187	GCA_000288275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/275/GCA_000288275.1_ASM28827v1	-	GB00247
Streptococcus suis YS31	1214197	PRJNA171459	171459	Terrabacteria group	Firmicutes	2.22714	41	-	ALML01	55	2302	2136	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469564	GCA_000441175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/175/GCA_000441175.1_version1	-	YS31
Pseudomonas syringae CC1466	1357274	PRJNA211394	211394	Proteobacteria	Gammaproteobacteria	5.59175	58.5	-	AVEM02	294	5115	4819	8/20/13	3/24/17	Contig	University of Arizona	SAMN02471555	GCA_000452785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/785/GCA_000452785.2_CC1466_092313_2.0	24459267	CC1466
Legionella pneumophila	446	PRJNA281023	281023	Proteobacteria	Gammaproteobacteria	3.56718	38.2	-	LAXQ01	45	3270	3129	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03481558	GCA_001582155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/155/GCA_001582155.1_ASM158215v1	26888563	ATCC 35289
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.86705	50.6	-	NPZO01	116	5077	4705	8/11/17	8/15/17	Contig	JCVI	SAMN07450569	GCA_002246205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/205/GCA_002246205.1_ASM224620v1	-	ECCRETH06
Bacteroides fragilis str. S6R8	1339322	PRJNA206165	206165	FCB group	Bacteroidetes/Chlorobi group	5.21464	43.4	-	JGVE01	133	4726	4404	3/26/14	4/4/17	Contig	IGS	SAMN02314562	GCA_000601075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/075/GCA_000601075.2_ASM60107v2	-	S6R8
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.19146	38.3	-	NGQC01	109	2168	2000	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848376	GCA_002254185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/185/GCA_002254185.1_ASM225418v1	-	103v
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.05668	67	-	MURP01	206	7679	7200	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001853	GCA_001991935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/935/GCA_001991935.1_ASM199193v1	-	VC15566
Burkholderia pseudomallei	28450	PRJNA352974	352974	Proteobacteria	Betaproteobacteria	7.30071	67.9647	chromosome 1:NZ_CP018393.1/CP018393.1; chromosome 2:NZ_CP018394.1/CP018394.1	-	2	7516	6854	4/26/17	5/1/17	Chromosome	Centers for Disease Control and Prevention	SAMN06007567	GCA_002110985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/985/GCA_002110985.1_ASM211098v1	-	2011756296
Chlamydia trachomatis L2b/Ams1	1071778	PRJEA71117	71117	PVC group	Chlamydiae	1.04638	41.2634	chromosome:NC_020933.1/HE601959.1; plasmid pAms1:NC_020980.1/HE603213.1	-	2	973	902	3/13/12	3/23/17	Chromosome	Sanger Institute	SAMEA2272716	GCA_000319005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/005/GCA_000319005.1_ASM31900v1	22406642	L2b/Ams1
Bacillus thuringiensis serovar mexicanensis	180868	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.77355	34.7	-	NFCF01	124	7253	6724	5/17/17	6/16/17	Contig	Huazhong Agricultural University	SAMN05934489	GCA_002146325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/325/GCA_002146325.1_ASM214632v1	-	BGSC 4AC1
Vibrio cholerae HC-51A1	992004	PRJNA64015	64015	Proteobacteria	Gammaproteobacteria	3.92984	47.7	-	ALDT01	140	3727	3461	10/4/12	3/23/17	Scaffold	Institute for Genome Sciences	SAMN00622042	GCA_000303105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/105/GCA_000303105.1_ASM30310v1	-	HC-51A1
Clostridioides difficile CD46	1151269	PRJNA85711	85711	Terrabacteria group	Firmicutes	4.01889	28.3	-	AVGZ01	40	3692	3565	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766619	GCA_000449085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/085/GCA_000449085.2_ASM44908v2	-	CD46
Francisella tularensis	263	PRJNA253522	253522	Proteobacteria	Gammaproteobacteria	1.8537	32.3	-	JPMN01	94	2013	1559	2/25/16	4/5/17	Contig	Swedish Defence Research Agency	SAMN02870486	GCA_001574785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/785/GCA_001574785.1_ASM157478v1	-	NO-12/2011
Brucella abortus NI495a	1160170	PRJNA173564	173564	Proteobacteria	Alphaproteobacteria	3.28696	57.2	-	AQJW01	4	3376	3154	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00811194	GCA_000370545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/545/GCA_000370545.1_Bruc_abor_NI495a_V1	-	NI495a
Xanthomonas citri subsp. citri	611301	PRJEB7195	265973	Proteobacteria	Gammaproteobacteria	5.2329	64.6	-	CDAJ01	978	5081	4218	11/4/14	4/2/17	Contig	CIRAD	SAMEA2827235	GCA_000825425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/425/GCA_000825425.1_XACJK48	-	JK48
Xanthomonas oryzae pv. oryzae	64187	PRJNA269412	269412	Proteobacteria	Gammaproteobacteria	4.21785	63.9	-	JXEI01	418	4168	3383	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252511	GCA_001928265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/265/GCA_001928265.1_ASM192826v1	-	BXO590
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.93047	37.7	-	MLMQ01	216	1985	1749	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297056	GCA_001867895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/895/GCA_001867895.1_ASM186789v1	27118061	AWRIB343
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.22679	45.2	-	LQCU01	31	5050	4814	4/4/16	3/19/17	Scaffold	Health Canada	SAMN04377552	GCA_001609635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/635/GCA_001609635.1_ASM160963v1	-	A5Z905
Bacillus subtilis MB73/2	1267547	PRJNA183438	183438	Terrabacteria group	Firmicutes	4.17066	43.4	-	AOTY01	35	4379	4253	2/22/13	5/18/17	Contig	Intercollegiate Faculty of Biotechnology UG&MUG	SAMN01924755	GCA_000341775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/775/GCA_000341775.1_ASM34177v1	23682145	MB73/2
Campylobacter helveticus	28898	PRJNA284977	284977	Proteobacteria	delta/epsilon subdivisions	1.87149	34.3399	chromosome:NZ_CP020478.1/CP020478.1; plasmid pHELV-1:NZ_CP020479.1/CP020479.1; plasmid pHELV-2:NZ_CP020480.1/CP020480.1; plasmid pHELV-3:NZ_CP020481.1/CP020481.1; plasmid pHELV-4:NZ_CP020482.1/CP020482.1; plasmid pHELV-5:NZ_CP020483.1/CP020483.1	-	6	1994	1870	4/6/17	4/10/17	Complete Genome	"USDA, ARS, WRRC"	SAMN03737972	GCA_002080395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/395/GCA_002080395.1_ASM208039v1	-	ATCC 51209
Clostridium botulinum	1491	PRJNA239370	239370	Terrabacteria group	Firmicutes	3.83373	28.6	-	JFGD01	1086	3809	3182	7/18/14	3/24/17	Contig	Centers for Disease Control and Prevention	SAMN02664953	GCA_000730835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/835/GCA_000730835.1_ASM73083v1	25031122	CDC66088
Enterococcus faecalis ERV72	1134796	PRJNA81981	81981	Terrabacteria group	Firmicutes	3.13714	37.3	-	ALZU01	94	3252	3093	8/27/12	3/27/17	Scaffold	Washington University	SAMN02299472	GCA_000294225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/225/GCA_000294225.2_ASM29422v2	-	ERV72
Streptococcus mutans S1B	857105	PRJNA49853	49853	Terrabacteria group	Firmicutes	2.00636	36.8	-	AHRC01	132	2001	1888	2/11/13	3/23/17	Contig	Cornell University	SAMN02428982	GCA_000339055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/055/GCA_000339055.1_ASM33905v1	23228887	S1B
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.08986	52.6	-	CQLU01	74	2451	2126	3/23/15	4/11/17	Contig	SC	SAMEA1690498	GCA_001091685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/685/GCA_001091685.1_8289_2_74	-	GCGS074
Enterococcus faecium 509	1134808	PRJNA82003	82003	Terrabacteria group	Firmicutes	2.97845	37.8	-	AMBJ01	244	3068	2895	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299483	GCA_000295515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/515/GCA_000295515.2_ASM29551v2	-	509
Stenotrophomonas maltophilia	40324	PRJNA390523	390523	Proteobacteria	Gammaproteobacteria	4.86783	66.6	-	NIVW01	176	4550	4368	6/22/17	6/26/17	Contig	JCVI	SAMN07237139	GCA_002205225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/225/GCA_002205225.1_ASM220522v1	-	S2722A9
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15933	41.1	-	CVZN01	72	2106	1927	6/23/15	3/26/17	Contig	SC	SAMEA1032843	GCA_001176525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/525/GCA_001176525.1_6903_2_19	-	EQUI0068
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.2999	40.3	-	LQEE01	29	2157	2062	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366526	GCA_001930405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/405/GCA_001930405.1_ASM193040v1	-	2497PM
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.92198	46.6	-	JTIN01	108	3003	2777	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196627	GCA_001657075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/075/GCA_001657075.1_ASM165707v1	-	Lrh17
Brucella melitensis bv. 1 str. M5	1004957	PRJNA65459	65459	Proteobacteria	Alphaproteobacteria	3.27796	57.3	-	AFEZ02	30	3344	3094	4/26/11	4/2/17	Contig	"Microbial Genome Research Center, CAS Key laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences"	SAMN02470035	GCA_000209575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/209/575/GCA_000209575.2_ASM20957v2	21602346	M5
Capnocytophaga cynodegmi	28189	PRJNA369395	369395	FCB group	Bacteroidetes/Chlorobi group	2.64047	34.3	chromosome:CP022378.1	-	1	2329	2239	9/14/17	9/14/17	Complete Genome	Centers for Disease Control and Prevention	SAMN06754876	GCA_002302475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/475/GCA_002302475.1_ASM230247v1	-	G7591
Corynebacterium diphtheriae	1717	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.38035	53.6	-	MSIM01	44	2348	2142	6/20/17	6/22/17	Contig	Northumbria University	SAMN06174244	GCA_002201075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/075/GCA_002201075.1_ASM220107v1	-	4461
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.46995	46.9	-	CQAM01	171	4199	3933	3/23/15	3/26/17	Scaffold	SC	SAMEA980199	GCA_001090885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/885/GCA_001090885.1_5116_3_8	-	H621/87
Serratia marcescens	615	PRJNA381643	381643	Proteobacteria	Gammaproteobacteria	5.10722	60	-	NBWX01	27	4858	4693	4/21/17	4/24/17	Contig	UCLA Clinical Microbiology Laboratory	SAMN06685768	GCA_002104105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/105/GCA_002104105.1_ASM210410v1	-	D-1
Lactobacillus plantarum	1590	PRJNA314033	314033	Terrabacteria group	Firmicutes	3.38606	44.2	-	LUWO01	70	3303	3141	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04528229	GCA_001633325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/325/GCA_001633325.1_ASM163332v1	-	Nizo2484
Campylobacter coli BIGS0019	1247742	PRJNA177352	177352	Proteobacteria	delta/epsilon subdivisions	1.67894	31.6	-	ANHD01	276	1796	1623	11/23/12	3/15/17	Contig	Swansea University	SAMN01795903	GCA_000314385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/385/GCA_000314385.1_ASM31438v1	23279096	BIGS0019
Burkholderia sp. HI2714	2015359	PRJNA391085	391085	Proteobacteria	Betaproteobacteria	8.93763	66.2	-	NKFM01	187	8333	7817	7/20/17	7/22/17	Contig	University of Michigan	SAMN07257394	GCA_002223085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/085/GCA_002223085.1_ASM222308v1	-	HI2714
Propionibacterium acnes J165	679195	PRJNA40681	40681	Terrabacteria group	Actinobacteria	2.50008	60	-	ADJL01	62	2533	2369	2/18/10	3/30/17	Contig	JCVI	SAMN00031757	GCA_000178055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/055/GCA_000178055.1_ASM17805v1	-	J165
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.58388	32.7	-	CUFG01	74	2582	2452	3/31/15	3/26/17	Contig	SC	SAMEA1035039	GCA_001238905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/905/GCA_001238905.1_7068_7_13	-	8074328
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.86989	55	-	JVCE01	67	4658	4505	7/10/15	3/26/17	Contig	University of Washington	SAMN03197758	GCA_001057255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/255/GCA_001057255.1_ASM105725v1	26230489	559_ECLO
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.23598	54.9	-	FKYX01	49	6090	5824	5/19/16	2/25/17	Scaffold	SC	SAMEA2273630	GCA_900083985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/985/GCA_900083985.1_12045_6_90	-	2880STDY5682554
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.59556	56.8	-	NCWL01	177	4489	4280	4/24/17	4/26/17	Contig	FDA/CFSAN	SAMN06712286	GCA_002107765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/765/GCA_002107765.1_ASM210776v1	-	MOD1-J148
Mycobacterium abscessus subsp. bolletii CRM-0020	1306401	PRJNA193351	193351	Terrabacteria group	Actinobacteria	4.84	64.2988	plasmid unnamed:NZ_ATFQ01000044.1/ATFQ01000044.1	ATFQ01	44	4882	4744	7/8/13	3/15/17	Contig	National Jewish Health	SAMN02205188	GCA_000418575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/575/GCA_000418575.1_CRM0020_v1.0	23950125	CRM-0020
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.2713	62.7	-	DDAG01	29	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457241	GCA_002332525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/525/GCA_002332525.1_ASM233252v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.60239	67.3	-	LOZJ01	103	6912	6573	1/22/16	6/27/17	Contig	Northern Arizona University	SAMN03449319	GCA_001527465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/465/GCA_001527465.1_ASM152746v1	-	MSMB1754
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	4.06172	38.8	-	MDHR01	105	3960	3792	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022852	GCA_001706585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/585/GCA_001706585.1_ASM170658v1	-	St-20772-90
Citrobacter freundii	546	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.08148	51.8	-	NGRC01	2	4994	4736	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521891	GCA_002151735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/735/GCA_002151735.1_ASM215173v1	-	MGH142
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.92374	54.9	-	JZZK01	86	4952	4685	3/19/15	3/25/17	Contig	JCVI	SAMN03283677	GCA_000957965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/957/965/GCA_000957965.1_ASM95796v1	-	35041
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.11609	55.1	-	LRDA01	122	5146	4799	1/19/16	4/6/17	Contig	JCVI	SAMN04407797	GCA_001518125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/125/GCA_001518125.1_ASM151812v1	-	GN05809
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.92371	64.1	-	FSET01	24	4895	4712	12/14/16	3/21/17	Scaffold	SC	SAMEA2259653	GCA_900134295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/295/GCA_900134295.1_11893_6_15	-	848
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.38546	66.9	-	LPIF01	82	7791	7411	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449557	GCA_001531905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/905/GCA_001531905.1_ASM153190v1	-	MSMB2210WGS
Pseudomonas sp. HMSC064G05	1715204	PRJNA296333	296333	Proteobacteria	Gammaproteobacteria	6.46485	66.2	-	LTIA01	144	6188	5951	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477558	GCA_001810325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/325/GCA_001810325.1_ASM181032v1	-	HMSC064G05
Streptomyces sp. NRRL WC-3549	1463925	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.31223	70.3	-	JOCS01	124	7062	5158	7/1/14	4/11/17	Scaffold	University of Illinois	SAMN02645425	GCA_000721935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/935/GCA_000721935.1_ASM72193v1	-	NRRL WC-3549
Bacillus sp. Aph1	1202456	PRJNA169111	169111	Terrabacteria group	Firmicutes	5.09631	38.2	-	ANNS01	458	5240	5070	6/10/13	4/17/17	Contig	University of Georgia	SAMN02471777	GCA_000409525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/525/GCA_000409525.1_Aph1	-	Aph1
Acinetobacter sp. 766875	1310677	PRJNA194753	194753	Proteobacteria	Gammaproteobacteria	4.02036	38.8	-	JEXX01	66	3917	3669	2/25/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02385030	GCA_000582055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/055/GCA_000582055.1_ASM58205v1	-	766875
Sphingomonas sp. CCH5-D11	1768786	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	4.39438	65.5	-	LSKH01	362	4259	3958	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299484	GCA_001557395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/395/GCA_001557395.1_ASM155739v1	-	CCH5-D11
Clostridium sp. CAG:678	1262831	PRJEB977	206703	Terrabacteria group	Firmicutes	2.38933	44.9	-	CAYP01	41	2296	2250	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138464	GCA_000431535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/535/GCA_000431535.1_MGS678	-	-
Rhodococcus sp. 06-412-2B	2022512	PRJNA395383	395383	Terrabacteria group	Actinobacteria	6.35903	64	-	NOYH01	30	6005	5859	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376382	GCA_002258385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/385/GCA_002258385.1_ASM225838v1	-	06-412-2B
Enterobacter cloacae complex sp. CIDEIMsCOL1	1870931	PRJNA271006	271006	Proteobacteria	Gammaproteobacteria	4.95661	55.9	-	JZKL01	51	4840	4646	3/30/15	4/10/17	Contig	JCVI	SAMN03277188	GCA_000965835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/835/GCA_000965835.1_ASM96583v1	-	CIDEIMsCOL1
Staphylococcus sp. HMSC055A10	1739509	PRJNA300159	300159	Terrabacteria group	Firmicutes	2.73634	31.8	-	LWQE01	94	2760	2622	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480426	GCA_001815115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/115/GCA_001815115.1_ASM181511v1	-	HMSC055A10
Corynebacterium sp. HMSC065A05	1739502	PRJNA300152	300152	Terrabacteria group	Actinobacteria	2.76661	63.4	-	LTTU01	76	2605	2479	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480420	GCA_001814975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/975/GCA_001814975.1_ASM181497v1	-	HMSC065A05
Arthrobacter sp. yr096	1761750	PRJEB16780	350924	Terrabacteria group	Actinobacteria	4.95929	62.6	-	FNYI01	26	4576	4426	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487917	GCA_900108925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/925/GCA_900108925.1_IMG-taxon_2615840638_annotated_assembly	-	YR096
Streptococcus sp. HMSC036H09	1715110	PRJNA296238	296238	Terrabacteria group	Firmicutes	2.05423	35.3	-	LTRG01	40	2097	2003	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498615	GCA_001836275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/275/GCA_001836275.1_ASM183627v1	-	HMSC036H09
Mycobacterium sp. 852002-30065_SCH5024008	1834088	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.2737	67.6	-	LZSZ01	192	4952	4713	6/17/16	4/12/17	Contig	JCVI	SAMN04696142	GCA_001665645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/645/GCA_001665645.1_ASM166564v1	-	852002-30065_SCH5024008
Prevotella sp. UBA758	1947222	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.26562	56.6	-	DBKE01	164	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456433	GCA_002297285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/285/GCA_002297285.1_ASM229728v1	28894102	-
Paenibacillus sp. XY044	2026089	PRJNA397944	397944	Terrabacteria group	Firmicutes	7.86944	52.3	-	NQMO01	27	7202	6979	8/16/17	8/17/17	Contig	Fujian Agriculture and Forestry University	SAMN07498096	GCA_002257645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/645/GCA_002257645.1_ASM225764v1	-	XY044
uncultured Ruminococcus sp.	165186	PRJEB10915	297013	Terrabacteria group	Firmicutes	4.5465	42.6	-	FMFY01	68	4120	4066	8/16/16	8/16/16	Scaffold	SC	SAMEA3545373	GCA_900066715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/715/GCA_900066715.1_14207_7_33	-	-
Prochlorococcus sp. scB243_495N4	1471476	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.19226	31.4	-	JFMA01	519	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671347	GCA_000634855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/855/GCA_000634855.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. P0021	1895595	PRJNA341013	341013	Proteobacteria	delta/epsilon subdivisions	1.57703	33.7	-	MJJZ01	19	1609	1528	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687033	GCA_002139465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/465/GCA_002139465.1_ASM213946v1	28854596	P0021
Rhizobium sp. Leaf384	1736358	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.8816	63.1	-	LMQE01	12	4429	4281	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151748	GCA_001424065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/065/GCA_001424065.1_Leaf384	26633631	Leaf384
Mesorhizobium sp. WSM3882	2029407	PRJNA399611	399611	Proteobacteria	Alphaproteobacteria	6.03199	63.4	-	NSFY01	43	5860	5475	9/12/17	9/14/17	Contig	Curtin University	SAMN07540846	GCA_002294765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/765/GCA_002294765.1_ASM229476v1	-	WSM3882
Microbacterium sp. SCN 70-27	1660114	PRJNA279279	279279	Terrabacteria group	Actinobacteria	2.65425	70	-	MEEK01	69	2486	2335	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652457	GCA_001724425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/425/GCA_001724425.1_ASM172442v1	26031303	-
Bacillus velezensis	492670	PRJDB4685	316424	Terrabacteria group	Firmicutes	4.00504	46.1	-	BDDG01	24	4053	3858	4/28/16	3/22/17	Scaffold	Incheon National University	SAMD00050900	GCA_001639945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/945/GCA_001639945.1_ASM163994v1	-	K26
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.77461	57.1	-	FXRJ01	227	5795	5372	4/28/17	5/6/17	Scaffold	SC	SAMEA2609520	GCA_900181905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/905/GCA_900181905.1_14936_2_47	-	3189STDY5864900
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.80678	32.3	-	FQKQ01	12	2811	2636	11/23/16	4/6/17	Scaffold	SC	SAMEA3449092	GCA_900126695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/695/GCA_900126695.1_17175_3_36	-	3688STDY6125084
Xanthomonas phaseoli pv. dieffenbachiae LMG 695	1437877	PRJNA254465	254465	Proteobacteria	Gammaproteobacteria	4.99471	64.9	-	JPYB01	458	4444	3919	10/21/15	4/4/17	Contig	Institute for Agricultural and Fisheries Research (ILVO)	SAMN02903992	GCA_001402235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/235/GCA_001402235.1_Xad_LMG695	-	LMG 695
Xanthomonas phaseoli pv. manihotis	43353	PRJNA297622	297622	Proteobacteria	Gammaproteobacteria	5.01642	64.8	-	LKKP01	205	4494	4120	12/24/15	4/5/17	Contig	CSIR-Institute of Microbial Technology	SAMN04126914	GCA_001482665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/665/GCA_001482665.1_ASM148266v1	-	LMG784
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.8267	32.3	-	FQKX01	15	2841	2672	11/23/16	4/5/17	Scaffold	SC	SAMEA3449111	GCA_900126805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/805/GCA_900126805.1_17175_3_55	-	3688STDY6125109
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.80392	57	-	FXRM01	107	5876	5511	4/28/17	5/6/17	Scaffold	SC	SAMEA2609527	GCA_900181915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/915/GCA_900181915.1_14936_2_50	-	3189STDY5864903
Bacillus velezensis	492670	PRJNA388288	388288	Terrabacteria group	Firmicutes	3.90559	46.4	-	NITU01	37	3894	3701	6/21/17	6/24/17	Scaffold	"North West University, Mafikeng"	SAMN07174738	GCA_002204665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/665/GCA_002204665.1_ASM220466v1	-	NWUMFk_BS10.5
Microbacterium sp. SCN 71-17	1660111	PRJNA279279	279279	Terrabacteria group	Actinobacteria	3.50375	70.7	-	MEEH01	154	3385	3155	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652454	GCA_001724905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/905/GCA_001724905.1_ASM172490v1	26031303	-
Mesorhizobium sp. WSM3868	2029405	PRJNA399611	399611	Proteobacteria	Alphaproteobacteria	6.06075	63.4	-	NSGB01	56	5897	5556	9/12/17	9/14/17	Contig	Curtin University	SAMN07540843	GCA_002294785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/785/GCA_002294785.1_ASM229478v1	-	WSM3868
Rhizobium sp. Leaf386	1736359	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	6.5787	60	-	LMQF01	69	6323	6084	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151749	GCA_001424085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/085/GCA_001424085.1_Leaf386	26633631	Leaf386
Campylobacter sp. P0085	1895597	PRJNA341015	341015	Proteobacteria	delta/epsilon subdivisions	1.58737	33.5	-	MJKB01	18	1647	1565	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687035	GCA_002139495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/495/GCA_002139495.1_ASM213949v1	28854596	P0085
Prochlorococcus sp. scB243_495P20	1471477	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.986037	31.3	-	JFMB01	270	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671348	GCA_000634875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/875/GCA_000634875.1_De_novo_assembly_of_single-cell_genomes	24763590	-
uncultured Ruminococcus sp.	165186	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.10406	50	-	FMGG01	38	2788	2739	8/16/16	8/16/16	Scaffold	SC	SAMEA3545392	GCA_900066815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/815/GCA_900066815.1_14207_7_52	-	-
Paenibacillus sp. 7884-2	2022552	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.53046	37.5	-	NPDE01	135	4362	4232	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372735	GCA_002272235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/235/GCA_002272235.1_assembly-7884-2_v1	-	7884-2
Prevotella sp. UBA752	1947218	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.56479	55.8	-	DBKK01	176	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06456437	GCA_002297825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/825/GCA_002297825.1_ASM229782v1	28894102	-
Mycobacterium sp. 852013-50091_SCH5140682	1834109	PRJNA305922	305922	Terrabacteria group	Actinobacteria	7.84773	66.3	-	LZTB01	143	7514	7225	6/17/16	4/12/17	Contig	JCVI	SAMN04696145	GCA_001665685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/685/GCA_001665685.1_ASM166568v1	-	852013-50091_SCH5140682
Streptococcus sp. HMSC056B03	1715132	PRJNA296260	296260	Terrabacteria group	Firmicutes	2.03836	35.3	-	LTRD01	92	2070	1994	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498628	GCA_001836325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/325/GCA_001836325.1_ASM183632v1	-	HMSC056B03
Arthrobacter sp. ov118	1761747	PRJEB17545	352028	Terrabacteria group	Actinobacteria	4.45318	66.4	-	FPAY01	22	4059	3853	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487915	GCA_900116495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/495/GCA_900116495.1_IMG-taxon_2609459726_annotated_assembly	-	OV118
Corynebacterium sp. HMSC073D01	1739536	PRJNA300187	300187	Terrabacteria group	Actinobacteria	2.80479	59.1	-	LTSS01	82	2504	2374	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480450	GCA_001815555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/555/GCA_001815555.1_ASM181555v1	-	HMSC073D01
Staphylococcus sp. HMSC065E08	1739510	PRJNA300160	300160	Terrabacteria group	Firmicutes	2.63587	34.4	-	LTTN01	95	2510	2432	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480427	GCA_001815145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/145/GCA_001815145.1_ASM181514v1	-	HMSC065E08
Enterobacter cloacae complex sp. CIDEIMsCOL9	1870932	PRJNA271006	271006	Proteobacteria	Gammaproteobacteria	5.28705	55.9	-	JZKT01	150	5173	4869	3/30/15	4/10/17	Contig	JCVI	SAMN03277196	GCA_000965885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/885/GCA_000965885.1_ASM96588v1	-	CIDEIMsCOL9
Rhodococcus sp. 05-2256-B1	2022518	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.76551	64.4	-	NOZA01	42	5473	5313	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376388	GCA_002258465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/465/GCA_002258465.1_ASM225846v1	-	05-2256-B1
Clostridium sp. CAG:306	1262794	PRJEB821	206840	Terrabacteria group	Firmicutes	2.19528	36.4	-	CBEW01	73	2172	2130	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138465	GCA_000431555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/555/GCA_000431555.1_MGS306	-	-
Sphingomonas sp. CCH18-H6	1768787	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	3.99129	66.7	-	LSKI01	206	3904	3686	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299485	GCA_001557405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/405/GCA_001557405.1_ASM155740v1	-	CCH18-H6
Acinetobacter sp. 1578804	1310689	PRJNA194765	194765	Proteobacteria	Gammaproteobacteria	4.0961	38.7	-	JEYF01	168	4126	3774	2/25/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02385038	GCA_000582075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/075/GCA_000582075.1_ASM58207v1	-	1578804
Bacillus sp. RP1137	1380110	PRJNA222794	222794	Terrabacteria group	Firmicutes	5.87804	37.5	-	AXZS01	65	6008	5779	11/27/13	4/9/17	Contig	Institute of Marine and Environmental Technology	SAMN02378757	GCA_000500145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/145/GCA_000500145.1_Bacillus_sp._strain_RP1137	24385572	RP1137
Streptomyces sp. NRRL WC-3774	1463937	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.6042	70.8	-	JOBZ01	814	8988	7936	7/1/14	3/11/17	Scaffold	University of Illinois	SAMN02645406	GCA_000721945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/945/GCA_000721945.1_ASM72194v1	-	NRRL WC-3774
Pseudomonas sp. HMSC075A08	1739250	PRJNA299900	299900	Proteobacteria	Gammaproteobacteria	6.35004	66.4	-	LWQQ01	110	6077	5866	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477565	GCA_001810465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/465/GCA_001810465.1_ASM181046v1	-	HMSC075A08
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.06403	66.8	-	LPIG01	51	6564	6287	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449558	GCA_001531915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/915/GCA_001531915.1_ASM153191v1	-	MSMB2211WGS
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.19663	64.1	-	FWCL01	15	5263	5052	3/16/17	3/24/17	Scaffold	SC	SAMEA2275676	GCA_900134335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/335/GCA_900134335.1_12082_5_58	-	954
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.27221	55	-	LRCY01	194	5315	4885	1/19/16	4/6/17	Contig	JCVI	SAMN04407795	GCA_001518435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/435/GCA_001518435.1_ASM151843v1	-	GN05782
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.66956	55.6	-	JZZJ01	28	4499	4346	3/19/15	3/25/17	Contig	JCVI	SAMN03283678	GCA_000958005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/005/GCA_000958005.1_ASM95800v1	-	35415
Citrobacter freundii	546	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.31513	51.6	-	NGRD01	5	5358	4996	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521894	GCA_002151755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/755/GCA_002151755.1_ASM215175v1	-	MGH145
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	3.89457	38.7	-	MDIG01	101	3818	3625	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022866	GCA_001706635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/635/GCA_001706635.1_ASM170663v1	-	UKK-0543
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.71005	67.1	-	LOZL01	154	7058	6659	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449321	GCA_001527505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/505/GCA_001527505.1_ASM152750v1	-	MSMB1757
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.94615	62.8	-	DDAQ01	223	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452160	GCA_002332925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/925/GCA_002332925.1_ASM233292v1	28894102	-
Mycobacterium abscessus MAB_082312_2272	1335412	PRJNA203567	203567	Terrabacteria group	Actinobacteria	4.87707	64.2	-	JAOW01	18	4906	4734	1/27/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02641617	GCA_000523735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/735/GCA_000523735.1_ASM52373v1	-	MAB_082312_2272
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.50125	56.7	-	NCWK01	127	4378	4142	4/24/17	4/26/17	Contig	FDA/CFSAN	SAMN06712287	GCA_002107775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/775/GCA_002107775.1_ASM210777v1	-	MOD1-cr1
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.40124	54.8	-	FLAA01	62	6293	6027	5/19/16	2/21/17	Scaffold	SC	SAMEA2273610	GCA_900083995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/995/GCA_900083995.1_12045_6_74	-	2880STDY5682534
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.86095	55	-	JVBY01	99	4633	4500	7/10/15	3/26/17	Contig	University of Washington	SAMN03197764	GCA_001057315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/315/GCA_001057315.1_ASM105731v1	26230489	564_ECLO
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.52101	32.7	-	CUET01	76	2520	2377	3/31/15	3/26/17	Contig	SC	SAMEA1035115	GCA_001239505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/505/GCA_001239505.1_7067_4_84	-	CN1115
Propionibacterium acnes SK187	686659	PRJNA41555	41555	Terrabacteria group	Actinobacteria	2.51093	59.9	-	ADJM01	37	2510	2368	2/18/10	3/30/17	Contig	JCVI	SAMN00031756	GCA_000178075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/075/GCA_000178075.1_ASM17807v1	-	SK187
Burkholderia sp. AU33803	2015357	PRJNA391085	391085	Proteobacteria	Betaproteobacteria	8.01754	66.7	-	NKFJ01	28	7399	7109	7/20/17	7/22/17	Contig	University of Michigan	SAMN07257392	GCA_002223095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/095/GCA_002223095.1_ASM222309v1	-	AU33803
Campylobacter coli BIGS0021	1247744	PRJNA177352	177352	Proteobacteria	delta/epsilon subdivisions	1.56689	32	-	ANHF01	374	1734	1504	11/23/12	3/15/17	Contig	Swansea University	SAMN01795905	GCA_000314425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/425/GCA_000314425.1_ASM31442v1	23279096	BIGS0021
Lactobacillus plantarum	1590	PRJNA314034	314034	Terrabacteria group	Firmicutes	3.34856	44.3	-	LUWP01	62	3269	3107	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04528231	GCA_001633335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/335/GCA_001633335.1_ASM163333v1	-	Nizo2485
Serratia marcescens	615	PRJNA381643	381643	Proteobacteria	Gammaproteobacteria	5.10624	60	-	NBWW01	17	4855	4699	4/21/17	4/26/17	Contig	UCLA Clinical Microbiology Laboratory	SAMN06685769	GCA_002104115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/115/GCA_002104115.1_ASM210411v1	-	D-2
Yersinia enterocolitica	630	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.55439	46.8	-	CPWQ01	132	4308	4046	3/22/15	3/26/17	Scaffold	SC	SAMEA859857	GCA_001097785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/785/GCA_001097785.1_4840_7_8	-	1127
Corynebacterium diphtheriae	1717	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.46079	53.5	-	MSIP01	23	2374	2205	6/20/17	6/22/17	Contig	Northumbria University	SAMN06174247	GCA_002201085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/085/GCA_002201085.1_ASM220108v1	-	1457
Flavobacterium johnsoniae	986	PRJNA329021	329021	FCB group	Bacteroidetes/Chlorobi group	5.10972	34.3	chromosome:NZ_CP016907.1/CP016907.1	-	1	4323	4183	8/16/16	4/13/17	Complete Genome	Korea university	SAMN05389975	GCA_001705175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/175/GCA_001705175.1_ASM170517v1	-	GSE09
Brucella melitensis bv. 1 str. M28-12	1004956	PRJNA65461	65461	Proteobacteria	Alphaproteobacteria	3.27873	57.3	-	AFFA02	29	3347	3095	4/26/11	4/2/17	Contig	"Microbial Genome Research Center, CAS Key laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences"	SAMN02470028	GCA_000209595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/209/595/GCA_000209595.2_ASM20959v2	21602346	M28-12
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.92573	46.6	-	JTIO01	134	2997	2759	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196622	GCA_001657085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/085/GCA_001657085.1_ASM165708v1	-	Lrh16
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.29351	40.3	-	LQEI01	32	2155	2056	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366530	GCA_001930445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/445/GCA_001930445.1_ASM193044v1	-	2526PM
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12168	41.2	-	CWDG01	73	2049	1873	6/24/15	3/26/17	Contig	SC	SAMEA1032844	GCA_001176545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/545/GCA_001176545.1_6903_6_5	-	EQUI0150
Stenotrophomonas maltophilia	40324	PRJNA390523	390523	Proteobacteria	Gammaproteobacteria	4.71208	66.2	-	NIVY01	132	4343	4150	6/22/17	6/26/17	Contig	JCVI	SAMN07237145	GCA_002205245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/245/GCA_002205245.1_ASM220524v1	-	910
Enterococcus faecium 510	1134809	PRJNA82005	82005	Terrabacteria group	Firmicutes	2.89342	37.7	-	AMBI01	208	2977	2839	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299484	GCA_000295535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/535/GCA_000295535.2_ASM29553v2	-	510
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.1478	52.4	-	CQIO01	69	2529	2199	3/22/15	4/11/17	Contig	SC	SAMEA1690505	GCA_001092305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/305/GCA_001092305.1_8727_8_65	-	GCGS161
Streptococcus mutans SA41	857103	PRJNA49859	49859	Terrabacteria group	Firmicutes	1.95232	36.8	-	AHRE01	104	1934	1845	2/11/13	3/23/17	Contig	Cornell University	SAMN02429080	GCA_000339075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/075/GCA_000339075.1_ASM33907v1	23228887	SA41
Enterococcus faecalis ERV73	1134797	PRJNA81983	81983	Terrabacteria group	Firmicutes	3.08542	37.4	-	ALZV01	125	3172	2970	8/27/12	3/27/17	Scaffold	Washington University	SAMN02299473	GCA_000294245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/245/GCA_000294245.2_ASM29424v2	-	ERV73
Clostridium botulinum	1491	PRJNA239370	239370	Terrabacteria group	Firmicutes	3.96513	28.1	-	JFGN01	400	3862	3227	7/18/14	3/24/17	Contig	Centers for Disease Control and Prevention	SAMN02664718	GCA_000730875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/875/GCA_000730875.1_ASM73087v1	25031122	CDC28012
Thermoanaerobacter wiegelii Rt8.B1	697303	PRJNA42251	42251	Terrabacteria group	Firmicutes	2.78506	34.3	chromosome:NC_015958.1/CP002991.1	-	1	2744	2424	8/23/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00016423	GCA_000147695.3	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/695/GCA_000147695.3_ASM14769v3	-	Rt8.B1
Bacillus subtilis PS216	1315975	PRJNA196327	196327	Terrabacteria group	Firmicutes	4.30719	43.8	-	AQGR01	146	4524	4259	5/1/13	4/10/17	Contig	American Museum of Natural History	SAMN02009237	GCA_000385985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/985/GCA_000385985.1_Bacillus_subtilis_PS216	23788536	PS216
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.07978	45.3	-	LQCT01	36	4911	4679	4/4/16	3/19/17	Scaffold	Health Canada	SAMN04377551	GCA_001609695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/695/GCA_001609695.1_ASM160969v1	-	A5Z878
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.89023	38	-	MLMT01	194	1949	1733	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297059	GCA_001867915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/915/GCA_001867915.1_ASM186791v1	27118061	AWRIB346
Xanthomonas oryzae pv. oryzae	64187	PRJNA269413	269413	Proteobacteria	Gammaproteobacteria	4.26264	63.9	-	JXEJ01	425	4232	3400	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252533	GCA_001928285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/285/GCA_001928285.1_ASM192828v1	-	DXO-012
Xanthomonas citri subsp. citri	611301	PRJEB7196	265974	Proteobacteria	Gammaproteobacteria	5.22108	64.7	-	CDAK01	1124	5099	4179	11/4/14	4/2/17	Contig	CIRAD	SAMEA2827234	GCA_000825445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/445/GCA_000825445.1_XACLG97	-	LG97
Brucella abortus R42-08	1169221	PRJNA173510	173510	Proteobacteria	Alphaproteobacteria	3.29171	57.2	-	AQJX01	4	3369	3125	4/16/13	3/23/17	Scaffold	Broad Institute	SAMN00839707	GCA_000370565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/370/565/GCA_000370565.1_Bruc_abor_R42-08_V1	-	R42-08
Francisella tularensis	263	PRJNA253522	253522	Proteobacteria	Gammaproteobacteria	1.85978	32.3	-	JPMO01	96	2012	1553	2/25/16	4/4/17	Contig	Swedish Defence Research Agency	SAMN02870487	GCA_001574795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/795/GCA_001574795.1_ASM157479v1	-	NO-13/2011
Clostridioides difficile CD47	1151270	PRJNA85713	85713	Terrabacteria group	Firmicutes	4.18573	28.4	-	AVHA01	129	3911	3724	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766620	GCA_000449105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/105/GCA_000449105.2_ASM44910v2	-	CD47
Vibrio cholerae HC-81A2	1000951	PRJNA64671	64671	Proteobacteria	Gammaproteobacteria	4.02893	47.5	-	ALEA01	98	3832	3630	10/4/12	3/23/17	Scaffold	Institute for Genome Sciences	SAMN00622045	GCA_000303125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/125/GCA_000303125.1_ASM30312v1	-	HC-81A2
Bacillus thuringiensis serovar toguchini	180898	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.19233	35.2	-	NFCG01	148	6583	6133	5/17/17	5/24/17	Contig	Huazhong Agricultural University	SAMN05934490	GCA_002146345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/345/GCA_002146345.1_ASM214634v1	-	BGSC 4AD1
Chlamydia trachomatis L2b/Ams2	1071779	PRJEA71119	71119	PVC group	Chlamydiae	1.04636	41.2634	chromosome:NC_020934.1/HE601961.1; plasmid pAms2:NC_020948.1/HE603214.1	-	2	973	899	3/13/12	3/23/17	Chromosome	Sanger Institute	SAMEA2272228	GCA_000319025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/025/GCA_000319025.1_ASM31902v1	22406642	L2b/Ams2
Burkholderia pseudomallei	28450	PRJNA352974	352974	Proteobacteria	Betaproteobacteria	7.34795	67.92	chromosome 1:NZ_CP018367.1/CP018367.1; chromosome 2:NZ_CP018368.1/CP018368.1	-	2	7515	6894	4/26/17	5/1/17	Chromosome	Centers for Disease Control and Prevention	SAMN06007554	GCA_002111065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/065/GCA_002111065.1_ASM211106v1	-	2002721100
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.19416	67.1	-	MURS01	147	7906	7367	2/10/17	4/2/17	Contig	University of British Columbia	SAMN05001856	GCA_001991955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/955/GCA_001991955.1_ASM199195v1	-	VC6533
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.19097	38.3	-	NGQD01	143	2166	1988	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848375	GCA_002254195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/195/GCA_002254195.1_ASM225419v1	-	103p
Bacteroides fragilis str. 1007-1-F #6	1339340	PRJNA206183	206183	FCB group	Bacteroidetes/Chlorobi group	5.60262	43.2	-	JGVF01	87	5089	4757	3/26/14	4/18/17	Contig	IGS	SAMN02315077	GCA_000601095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/095/GCA_000601095.1_ASM60109v1	-	1007-1-F #6
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.34469	50.5	-	NQAI01	187	5627	5238	8/11/17	8/15/17	Contig	JCVI	SAMN07450579	GCA_002246485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/485/GCA_002246485.1_ASM224648v1	-	ECCTRPRTH03
Legionella pneumophila subsp. pneumophila ATCC 43283	933091	PRJNA281025	281025	Proteobacteria	Gammaproteobacteria	3.43144	38.3	-	LAXR01	18	3121	2979	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03481562	GCA_001582165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/165/GCA_001582165.1_ASM158216v1	26888563	ATCC 43283
Pseudomonas syringae CC1458	1357273	PRJNA211392	211392	Proteobacteria	Gammaproteobacteria	5.80121	59.1	-	AVEN02	364	5182	4889	8/20/13	3/24/17	Contig	University of Arizona	SAMN02471556	GCA_000452805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/805/GCA_000452805.2_CC1458_092313_2.0	24459267	CC1458
Streptococcus suis YS34	1214198	PRJNA171460	171460	Terrabacteria group	Firmicutes	2.37469	41	-	ALMM01	65	2362	2234	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469513	GCA_000441195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/195/GCA_000441195.1_version1	-	YS34
Streptococcus agalactiae GB00901	1154944	PRJNA86561	86561	Terrabacteria group	Firmicutes	2.17927	35.2	-	ALUK01	24	2268	2148	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991449	GCA_000288295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/295/GCA_000288295.1_ASM28829v1	-	GB00901
Acinetobacter baumannii 6014059	525242	PRJNA33073	33073	Proteobacteria	Gammaproteobacteria	3.87881	39	-	ACYS02	143	3789	3616	9/29/09	3/15/17	Scaffold	WUGSC	SAMN00189092	GCA_000163395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/395/GCA_000163395.2_ASM16339v2	-	6014059
Clostridium lentocellum DSM 5427	642492	PRJNA41511	41511	Terrabacteria group	Firmicutes	4.71424	34.3	chromosome:NC_015275.1/CP002582.1	-	1	4296	4100	3/22/11	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00013959	GCA_000178835.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/835/GCA_000178835.2_ASM17883v2	21398547	DSM 5427
Bifidobacterium longum subsp. longum EK13	1457186	PRJNA236800	236800	Terrabacteria group	Actinobacteria	2.47453	60	-	JNWD01	39	2216	2067	7/16/14	4/2/17	Scaffold	Pirogov Russian National Research Medical University	SAMN02862997	GCA_000730135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/135/GCA_000730135.1_ASM73013v1	-	EK13
Shigella flexneri	623	PRJNA385907	385907	Proteobacteria	Gammaproteobacteria	4.56224	50.8	-	NGWE01	587	5280	4137	6/6/17	6/8/17	Contig	Christian Medical College	SAMN06920480	GCA_002174615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/615/GCA_002174615.1_ASM217461v1	-	FC2615
Bacillus anthracis str. Gmb1	1297868	PRJEB1518	191077	Terrabacteria group	Firmicutes	5.17508	35.2	-	CAVE01	39	5826	5428	3/28/13	5/18/17	Contig	URMITE	SAMEA2272630	GCA_000359465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/465/GCA_000359465.1_ASM35946v1	-	Gmb1
Pseudomonas putida MR3	1312921	PRJNA195540	195540	Proteobacteria	Gammaproteobacteria	2.99472	60.9	-	ARYY01	1268	-	-	5/13/13	1/8/14	Contig	"Department of Biotechnology, Junagadh Agricultural University, Junagadh, Gujarat, INDIA"	SAMN02470115	GCA_000390445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/445/GCA_000390445.1_ASM39044v1	-	MR3
Leptospira interrogans serovar Copenhageni str. Fiocruz LV4152	1291328	PRJNA188994	188994	Spirochaetes	Spirochaetia	4.67194	35	-	AOVW01	158	4177	3810	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920115	GCA_000343185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/185/GCA_000343185.1_CA_glsol099	-	Fiocruz LV4152
Streptococcus pyogenes ABC020015277	1439014	PRJNA233225	233225	Terrabacteria group	Firmicutes	1.77869	38.5	-	JJFV01	4	1786	1682	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567574	GCA_000630045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/045/GCA_000630045.1_Stre_pyog_ABC020015277_V1	-	ABC020015277
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.2044	51.6	chromosome:NZ_CP016885.1/CP016885.1	-	1	2550	2209	8/11/16	3/21/17	Chromosome	Centers for Disease Control and Prevention	SAMN04883410	GCA_001703795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/703/795/GCA_001703795.1_ASM170379v1	-	M25073
Thermoanaerobacter mathranii subsp. mathranii str. A3	583358	PRJNA33329	33329	Terrabacteria group	Firmicutes	2.30609	34.3	chromosome:NC_014209.1/CP002032.1	-	1	2321	2139	5/26/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598500	GCA_000092965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/965/GCA_000092965.1_ASM9296v1	-	A3
Streptococcus pneumoniae SP9-BS68	406558	PRJNA17961	17961	Terrabacteria group	Firmicutes	2.11568	39.6	-	ABAB01	61	2326	2039	5/22/07	3/9/17	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393745	GCA_000170055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/055/GCA_000170055.1_ASM17005v1	17675389	SP9-BS68
Campylobacter avium LMG 24591	522484	PRJNA66787	66787	Proteobacteria	delta/epsilon subdivisions	1.73863	34.2	chromosome:NZ_CP022347.1/CP022347.1	-	1	1767	1693	8/1/17	8/21/17	Complete Genome	"USDA, ARS, WRRC"	SAMN03737963	GCA_002238335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/335/GCA_002238335.1_ASM223833v1	-	LMG 24591
Mycobacterium tuberculosis TRS7	1334053	PRJNA203165	203165	Terrabacteria group	Actinobacteria	4.41153	65.4	chromosome:NZ_CP009178.1/CP009178.1	-	1	4301	4063	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837627	GCA_001998025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/025/GCA_001998025.1_ASM199802v1	27261264	TRS7
Haemophilus influenzae	727	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.79168	37.9	-	JUZZ01	119	1783	1659	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197815	GCA_001071435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/435/GCA_001071435.1_ASM107143v1	26230489	614_HPAR
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.07672	69.2	-	BDMZ01	276	4819	4540	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076653	GCA_002089195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/195/GCA_002089195.1_ASM208919v1	28045086	DH-7
Lactococcus lactis subsp. lactis bv. diacetylactis	44688	PRJNA294255	294255	Terrabacteria group	Firmicutes	2.45755	35	-	LIWD01	253	2534	2299	4/18/16	4/5/17	Contig	Radboudumc	SAMN04010513	GCA_001622235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/235/GCA_001622235.1_ASM162223v1	-	DRA4
Bacillus cereus VD148	1053237	PRJNA70441	70441	Terrabacteria group	Firmicutes	5.74292	35.3	-	AHFF01	9	6027	5641	8/15/12	6/15/17	Scaffold	Broad Institute	SAMN02596869	GCA_000290815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/815/GCA_000290815.1_Baci_cere_VD148_V1	-	VD148
Staphylococcus epidermidis	1282	PRJNA238030	238030	Terrabacteria group	Firmicutes	2.49873	32	-	JMIE01	71	2490	2325	6/12/14	3/24/17	Contig	IMMH Institute for medical microbiology and hygiene	SAMN02640610	GCA_000705055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/055/GCA_000705055.1_SE1057	-	1057
Lactobacillus lindneri	53444	PRJNA290141	290141	Terrabacteria group	Firmicutes	1.38974	34.2	chromosome:NZ_CP014872.1/CP014872.1	-	1	1398	1270	8/10/16	4/13/17	Complete Genome	Technische Universitaet Muenchen	SAMN04505734	GCA_001702115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/702/115/GCA_001702115.1_ASM170211v1	-	TMW 1.1993
Yersinia pestis subsp. microtus bv. Altaica	385967	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.64757	47.5	-	NHMW01	172	4445	4140	6/9/17	6/12/17	Scaffold	SRCAMB	SAMN05521431	GCA_002188685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/685/GCA_002188685.1_ASM218868v1	-	SCPM-O-DNA-06
Methanobrevibacter sp. YE315	1609968	PRJNA273773	273773	Euryarchaeota	Methanobacteria	2.2733	34.2	chromosome:NZ_CP010834.1/CP010834.1	-	1	2146	2029	2/4/16	4/11/17	Complete Genome	Queensland Government	SAMN03295748	GCA_001548675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/675/GCA_001548675.1_ASM154867v1	-	YE315
Candidatus Nitrosopumilus koreensis AR1	1229908	PRJNA174387	174387	TACK group	Thaumarchaeota	1.63996	34.2	chromosome:CP003842.1	-	1	1931	1890	9/27/12	1/30/14	Complete Genome	Chungbuk National University	SAMN02603137	GCA_000299365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/365/GCA_000299365.1_ASM29936v1	-	AR1
Nitrosopumilus maritimus SCM1	436308	PRJNA19265	19265	TACK group	Thaumarchaeota	1.64526	34.2	chromosome:CP000866.1	-	1	1840	1795	11/15/07	12/11/13	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000032	GCA_000018465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/465/GCA_000018465.1_ASM1846v1	-	SCM1
Wolbachia endosymbiont strain TRS of Brugia malayi	292805	PRJNA12475	12475	Proteobacteria	Alphaproteobacteria	1.08008	34.2	chromosome:NC_006833.1/AE017321.1	-	1	1047	839	2/2/05	4/17/17	Complete Genome	"New England Biolabs, Inc."	SAMN02603678	GCA_000008385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/385/GCA_000008385.1_ASM838v1	15780005	-
Campylobacter sp. RM6137	1660073	PRJNA284990	284990	Proteobacteria	delta/epsilon subdivisions	1.64061	34.1981	chromosome:NZ_CP018789.1/CP018789.1; plasmid pSUIS6137:NZ_CP018790.1/CP018790.1	-	2	1674	1601	5/15/17	5/23/17	Complete Genome	"USDA, ARS, WRRC"	SAMN03737993	GCA_002139855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/855/GCA_002139855.1_ASM213985v1	28854596	RM6137
Myroides odoratimimus	76832	PRJNA302352	302352	FCB group	Bacteroidetes/Chlorobi group	4.45775	34.1409	chromosome:NZ_CP013690.1/CP013690.1; plasmid p63039:NZ_CP013691.1/CP013691.1	-	2	4084	3840	12/23/15	4/4/17	Complete Genome	Huaqiao University	SAMN04270979	GCA_001481655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/655/GCA_001481655.1_ASM148165v1	-	PR63039
Yersinia pestis subsp. microtus bv. Altaica	385967	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.65254	47.6	-	NHMY01	198	4469	4138	6/9/17	6/12/17	Scaffold	SRCAMB	SAMN05521433	GCA_002188725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/725/GCA_002188725.1_ASM218872v1	-	SCPM-O-DNA-08
Pseudomonas fluorescens Wayne1	1007656	PRJNA65793	65793	Proteobacteria	Gammaproteobacteria	6.8158	63.4	-	CADW01	337	6280	5932	6/22/11	5/19/17	Scaffold	The Ohio State University	SAMEA3138415	GCA_000285355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/355/GCA_000285355.1_ASM28535v1	-	Wayne1
Macrococcus sp. IME1552	1898474	PRJNA342254	342254	Terrabacteria group	Firmicutes	2.3917	34.1	chromosome:NZ_CP017156.1/CP017156.1	-	1	2493	2392	9/19/17	9/21/17	Complete Genome	Beijing Institute of Microbiology and Epidemiology	SAMN05751580	GCA_002313045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/045/GCA_002313045.1_ASM231304v1	-	IME1552
Staphylococcus epidermidis	1282	PRJNA238030	238030	Terrabacteria group	Firmicutes	2.4175	32.1	-	JMID01	74	2409	2260	6/12/14	3/24/17	Contig	IMMH Institute for medical microbiology and hygiene	SAMN02640609	GCA_000705075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/075/GCA_000705075.1_SE1457	-	1457
Bacillus cereus VD115	1053230	PRJNA70427	70427	Terrabacteria group	Firmicutes	6.43502	35	-	AHEY01	17	6927	6373	8/15/12	6/15/17	Scaffold	Broad Institute	SAMN02596862	GCA_000290835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/835/GCA_000290835.1_Baci_cere_VD115_V1	-	VD115
Lactococcus lactis subsp. cremoris	1359	PRJNA286840	286840	Terrabacteria group	Firmicutes	2.61571	35.4	-	LITA01	182	2621	2402	4/18/16	4/5/17	Contig	Radboudumc	SAMN03770948	GCA_001622285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/285/GCA_001622285.1_ASM162228v1	-	N41
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.12978	69.1	-	BDNA01	389	4920	4566	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076683	GCA_002089215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/215/GCA_002089215.1_ASM208921v1	28045086	DH-8-4
Haemophilus influenzae	727	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.8463	38	-	JWCI01	67	1831	1724	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197078	GCA_001076115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/115/GCA_001076115.1_ASM107611v1	26230489	1123_HINF
Mycobacterium tuberculosis TRS5	1334051	PRJNA203163	203163	Terrabacteria group	Actinobacteria	4.41153	65.5	chromosome:NZ_CP009179.1/CP009179.1	-	1	4260	4075	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837625	GCA_001998075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/075/GCA_001998075.1_ASM199807v1	27261264	TRS5
Thermoanaerobacterium thermosaccharolyticum	1517	PRJNA328566	328566	Terrabacteria group	Firmicutes	2.89573	34.1	chromosome:NZ_CP016893.1/CP016893.1	-	1	2876	2660	8/14/17	8/16/17	Complete Genome	National University of Singapore	SAMN05375112	GCA_002250075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/075/GCA_002250075.1_ASM225007v1	-	TG57
Streptococcus pneumoniae SP11-BS70	406559	PRJNA17963	17963	Terrabacteria group	Firmicutes	2.05977	39.7	-	ABAC01	25	2264	2029	5/18/07	3/9/17	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393746	GCA_000170075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/075/GCA_000170075.1_ASM17007v1	17675389	SP11-BS70
Auricoccus indicus	1849491	PRJNA359636	359636	Terrabacteria group	Firmicutes	1.74579	34.1	chromosome:NZ_CP019573.1/CP019573.1	-	1	1788	1696	2/7/17	4/17/17	Complete Genome	Institute of Genomics and Integrative Biology	SAMN06196447	GCA_001989575.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/575/GCA_001989575.1_ASM198957v1	28086066	S31
Neisseria meningitidis ATCC 13091	862513	PRJNA50525	50525	Proteobacteria	Betaproteobacteria	2.26261	51.7	-	AEEF01	27	2498	2168	8/20/10	3/21/17	Scaffold	Baylor College of Medicine	SAMN00117532	GCA_000146655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/146/655/GCA_000146655.1_ASM14665v1	-	ATCC 13091
Streptococcus pyogenes ABC020014690	1439010	PRJNA233224	233224	Terrabacteria group	Firmicutes	1.82193	38.5	-	JJFW01	6	1848	1736	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567573	GCA_000630065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/065/GCA_000630065.1_Stre_pyog_ABC020014690_V1	-	ABC020014690
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2807	1291333	PRJNA189000	189000	Spirochaetes	Spirochaetia	4.61727	35	-	AOVQ01	162	4128	3750	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920565	GCA_000343205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/205/GCA_000343205.1_CA_glsol121	-	Fiocruz LV2807
Bacillus anthracis str. V770-NP1-R	1435357	PRJNA231233	231233	Terrabacteria group	Firmicutes	5.16452	35.2	-	AZQO01	36	5771	5464	1/21/14	3/24/17	Contig	Israel Institute for Biological Research	SAMN02597374	GCA_000521345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/345/GCA_000521345.1_BA_V770-NP1-R	24526646	V770-NP1-R
Shigella flexneri	623	PRJNA385907	385907	Proteobacteria	Gammaproteobacteria	4.34086	50.8	-	NGWC01	453	4891	3911	6/6/17	8/4/17	Contig	Christian Medical College	SAMN06920482	GCA_002174675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/675/GCA_002174675.1_ASM217467v1	-	FC1182
Bifidobacterium longum subsp. longum	1679	PRJNA263689	263689	Terrabacteria group	Actinobacteria	2.50193	60.3	-	JRWN01	34	2246	2074	11/21/14	4/2/17	Scaffold	Pirogov Russian National Research Medical University	SAMN03105207	GCA_000786175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/175/GCA_000786175.1_ASM78617v1	-	VMKB44
Myroides sp. ZB35	1458492	PRJNA349792	349792	FCB group	Bacteroidetes/Chlorobi group	4.06501	34.1	chromosome:NZ_CP017769.1/CP017769.1	-	1	3642	3444	11/3/16	4/13/17	Complete Genome	China University of Petroleum	SAMN05933030	GCA_001865835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/835/GCA_001865835.1_ASM186583v1	-	ZB35
Acinetobacter baumannii Ab11111	1168588	PRJNA157163	157163	Proteobacteria	Gammaproteobacteria	4.08033	39.1	-	AKAQ01	10	3903	3719	9/17/12	3/15/17	Scaffold	Broad Institute	SAMN02596915	GCA_000297915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/915/GCA_000297915.1_Acin_baum_Ab11111_V1	-	Ab11111
Streptococcus agalactiae GB00264	1154913	PRJNA86499	86499	Terrabacteria group	Firmicutes	2.05712	35.2	-	ALTH01	32	2116	2000	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991180	GCA_000288315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/315/GCA_000288315.1_ASM28831v1	-	GB00264
Streptococcus suis YS35	1214199	PRJNA171461	171461	Terrabacteria group	Firmicutes	2.3201	40.9	-	ALMN01	68	2322	2182	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469514	GCA_000441215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/215/GCA_000441215.1_version1	-	YS35
Pseudomonas syringae CC1417	1357272	PRJNA211390	211390	Proteobacteria	Gammaproteobacteria	5.64846	59.3	-	AVEO02	210	5131	4967	8/20/13	3/24/17	Contig	University of Arizona	SAMN02471559	GCA_000452825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/825/GCA_000452825.2_CC1417_092313_2.0	24459267	CC1417
Legionella pneumophila	446	PRJNA281032	281032	Proteobacteria	Gammaproteobacteria	3.28684	38.3	-	LAXS01	47	3042	2905	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03481606	GCA_001582215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/215/GCA_001582215.1_ASM158221v1	26888563	ATCC 43130
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.92969	50.8	-	NQAH01	98	5106	4787	8/11/17	8/15/17	Contig	JCVI	SAMN07450580	GCA_002246495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/495/GCA_002246495.1_ASM224649v1	-	ECCTRPRTH02
Bacteroides fragilis str. 3986 N3	1339304	PRJNA206147	206147	FCB group	Bacteroidetes/Chlorobi group	5.09366	43.2	-	JGVG01	36	4488	4236	3/26/14	4/2/17	Contig	IGS	SAMN02314522	GCA_000601115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/115/GCA_000601115.1_ASM60111v1	-	3986 N3
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.17096	38.4	-	NGQE01	179	2158	1974	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848374	GCA_002254245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/245/GCA_002254245.1_ASM225424v1	-	103o
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.67119	67	-	MURY01	183	7421	6846	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001862	GCA_001991975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/975/GCA_001991975.1_ASM199197v1	-	VC7692
Burkholderia pseudomallei	28450	PRJNA352974	352974	Proteobacteria	Betaproteobacteria	7.37604	67.9736	chromosome 1:NZ_CP018395.1/CP018395.1; chromosome 2:NZ_CP018397.1/CP018397.1; plasmid p1:NZ_CP018396.1/CP018396.1	-	3	7597	6959	4/26/17	5/1/17	Chromosome	Centers for Disease Control and Prevention	SAMN06007568	GCA_002111185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/185/GCA_002111185.1_ASM211118v1	-	2013746776
Chlamydia trachomatis L2b/Ams3	1071780	PRJEA71121	71121	PVC group	Chlamydiae	1.04623	41.2634	chromosome:NC_020977.1/HE601962.1; plasmid pAms3:NC_020949.1/HE603215.1	-	2	973	900	3/13/12	3/23/17	Chromosome	Sanger Institute	SAMEA2271925	GCA_000319045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/045/GCA_000319045.1_ASM31904v1	22406642	L2b/Ams3
Bacillus thuringiensis serovar silo	180889	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.19633	35.2	-	NFCJ01	136	6602	6136	5/17/17	5/24/17	Contig	Huazhong Agricultural University	SAMN05934493	GCA_002146395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/395/GCA_002146395.1_ASM214639v1	-	BGSC 4AG1
Vibrio cholerae CP1035(8)	991991	PRJNA63989	63989	Proteobacteria	Gammaproteobacteria	3.93336	47.6	-	AJRM01	158	3657	3392	10/10/12	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00736148	GCA_000304915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/915/GCA_000304915.2_ASM30491v2	26980836	CP1035(8)
Clostridioides difficile CD49	1151271	PRJNA85715	85715	Terrabacteria group	Firmicutes	4.2342	28.3	-	AVHB01	109	4000	3796	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766621	GCA_000449125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/125/GCA_000449125.2_ASM44912v2	-	CD49
Francisella tularensis	263	PRJNA253522	253522	Proteobacteria	Gammaproteobacteria	1.86635	32.3	-	JPMQ01	95	2013	1557	2/25/16	4/5/17	Contig	Swedish Defence Research Agency	SAMN02870490	GCA_001574835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/835/GCA_001574835.1_ASM157483v1	-	NO-16/2011
Brucella abortus 93/2	1169217	PRJNA173511	173511	Proteobacteria	Alphaproteobacteria	3.28967	57.2	-	ASGW01	10	3361	3146	5/16/13	3/24/17	Scaffold	Broad Institute	SAMN00839708	GCA_000398805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/805/GCA_000398805.1_Bruc_abor_93_2_V1	-	93/2
Xanthomonas citri subsp. citri	611301	PRJEB7197	265975	Proteobacteria	Gammaproteobacteria	5.20539	64.6	-	CDAU01	1121	4460	4379	11/4/14	11/4/14	Contig	CIRAD	SAMEA2827233	GCA_000825465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/465/GCA_000825465.1_XACB302	-	LB302
Xanthomonas oryzae pv. oryzae	64187	PRJNA269418	269418	Proteobacteria	Gammaproteobacteria	4.23791	63.9	-	JXEO01	430	4163	3391	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252522	GCA_001928325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/325/GCA_001928325.1_ASM192832v1	-	DXO-052
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.91085	37.7	-	MLMU01	225	1955	1725	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297060	GCA_001867945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/945/GCA_001867945.1_ASM186794v1	27118061	AWRIB391
Vibrio parahaemolyticus	670	PRJNA327110	327110	Proteobacteria	Gammaproteobacteria	5.45739	45.1	-	MBOW01	66	5251	4997	5/16/17	5/24/17	Scaffold	Health Canada	SAMN05301360	GCA_002144515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/515/GCA_002144515.1_ASM214451v1	-	04-2548_1
Bacillus subtilis Hal1	1201039	PRJNA169006	169006	Terrabacteria group	Firmicutes	3.97905	43.8	-	AMCA01	345	4094	3877	6/10/13	3/24/17	Contig	University of Georgia	SAMN02471781	GCA_000409585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/585/GCA_000409585.1_Hal1	-	Hal1
Candidatus Nitrocosmicus oleophilus	1353260	PRJNA210256	210256	TACK group	Thaumarchaeota	3.43071	34.1	chromosome:CP012850.1	-	1	3758	3725	10/8/15	11/28/16	Complete Genome	Chungbuk National University	SAMN03074222	GCA_000802205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/205/GCA_000802205.2_ASM80220v2	-	MY3
Clostridium botulinum	1491	PRJNA239370	239370	Terrabacteria group	Firmicutes	3.69989	28.6	-	JFGK01	880	3630	3141	7/18/14	3/24/17	Contig	Centers for Disease Control and Prevention	SAMN02664943	GCA_000730885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/885/GCA_000730885.1_ASM73088v1	25031122	CDC33702
Enterococcus faecalis ERV81	1134798	PRJNA81985	81985	Terrabacteria group	Firmicutes	3.14055	37.3	-	ALZW01	93	3251	3072	8/27/12	3/27/17	Scaffold	Washington University	SAMN02299474	GCA_000294265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/265/GCA_000294265.2_ASM29426v2	-	ERV81
Streptococcus mutans SF12	857102	PRJNA49861	49861	Terrabacteria group	Firmicutes	1.92589	36.9	-	AHRF01	107	1939	1858	2/11/13	3/23/17	Contig	Cornell University	SAMN02429033	GCA_000339095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/095/GCA_000339095.1_ASM33909v1	23228887	SF12
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.14057	52.4	-	CQNE01	79	2504	2192	3/22/15	4/10/17	Contig	SC	SAMEA1677355	GCA_001092465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/465/GCA_001092465.1_8727_5_92	-	GCGS242
Enterococcus faecium 511	1134810	PRJNA82007	82007	Terrabacteria group	Firmicutes	2.94834	37.7	-	AMBH01	249	3039	2879	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299485	GCA_000295555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/555/GCA_000295555.2_ASM29555v2	-	511
Stenotrophomonas maltophilia	40324	PRJNA390523	390523	Proteobacteria	Gammaproteobacteria	4.6951	66.7	-	NIVR01	146	4364	4176	6/22/17	6/24/17	Contig	JCVI	SAMN07237144	GCA_002205275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/275/GCA_002205275.1_ASM220527v1	-	1038
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.1475	41.1	-	CWEP01	65	2093	1916	6/23/15	3/26/17	Contig	SC	SAMEA1032845	GCA_001176565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/565/GCA_001176565.1_6817_1_59	-	EQUI0012
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.29541	40.3	-	LQEN01	30	2156	2057	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366535	GCA_001930465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/465/GCA_001930465.1_ASM193046v1	-	2597PM
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.89989	46.7	-	JTIQ01	79	2976	2788	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196644	GCA_001657115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/115/GCA_001657115.1_ASM165711v1	-	Lrh14
Brucella melitensis bv. 1 str. M111	1004955	PRJNA65463	65463	Proteobacteria	Alphaproteobacteria	3.27981	57.3	-	AFFB02	32	3348	3101	4/26/11	4/2/17	Contig	"Microbial Genome Research Center, CAS Key laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences"	SAMN02470029	GCA_000209615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/209/615/GCA_000209615.2_ASM20961v2	21602346	M111
Myroides sp. A21	1583100	PRJNA270160	270160	FCB group	Bacteroidetes/Chlorobi group	4.15546	34.1	chromosome:NZ_CP010327.1/CP010327.1	-	1	3750	3554	12/23/14	4/10/17	Complete Genome	Norddeutsches Zentrum für Mikrobielle Genomforschung	SAMN03263610	GCA_000807225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/225/GCA_000807225.1_ASM80722v1	25745004	A21
Corynebacterium diphtheriae	1717	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.44546	53.5	-	MSII01	25	2355	2184	6/20/17	6/22/17	Contig	Northumbria University	SAMN06174240	GCA_002201135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/135/GCA_002201135.1_ASM220113v1	-	700a
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.5626	47	-	CQAT01	107	4322	4047	3/23/15	3/26/17	Scaffold	SC	SAMEA980135	GCA_001098085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/085/GCA_001098085.1_4976_6_6	-	ERL032126
Serratia marcescens	615	PRJNA360331	360331	Proteobacteria	Gammaproteobacteria	5.26946	59.5	-	MTEH01	18	5092	4934	4/24/17	4/26/17	Contig	Wenzhou University	SAMN06209160	GCA_002108655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/655/GCA_002108655.1_ASM210865v1	-	Z6
Lactobacillus plantarum	1590	PRJNA314035	314035	Terrabacteria group	Firmicutes	3.30324	44.5	-	LUWQ01	57	3180	3032	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04528232	GCA_001633355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/355/GCA_001633355.1_ASM163335v1	-	Nizo2494
Campylobacter coli BIGS0025	1248403	PRJNA177352	177352	Proteobacteria	delta/epsilon subdivisions	1.65725	31.5	-	ANHJ01	261	1802	1604	11/23/12	3/15/17	Contig	Swansea University	SAMN01795909	GCA_000314505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/505/GCA_000314505.1_ASM31450v1	23279096	BIGS0025
Burkholderia sp. AU33647	2015356	PRJNA391085	391085	Proteobacteria	Betaproteobacteria	8.11648	66.7	-	NKFI01	36	7506	7205	7/20/17	7/22/17	Contig	University of Michigan	SAMN07257391	GCA_002223125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/125/GCA_002223125.1_ASM222312v1	-	AU33647
Propionibacterium acnes SK182	679193	PRJNA40675	40675	Terrabacteria group	Actinobacteria	2.47735	60.1	-	AFUM01	14	2509	2366	7/21/11	3/30/17	Contig	JCVI	SAMN00015391	GCA_000221125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/125/GCA_000221125.2_ASM22112v2	-	SK182
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.51864	32.7	-	CUGZ01	96	2507	2362	3/31/15	3/26/17	Contig	SC	SAMEA1035087	GCA_001239565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/565/GCA_001239565.1_7068_7_56	-	135814
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.75185	53.5	-	JUZQ01	183	4662	4452	7/10/15	3/26/17	Contig	University of Washington	SAMN03197824	GCA_001057675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/675/GCA_001057675.1_ASM105767v1	26230489	624_ECLO
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.39921	57.3	-	FLAG01	35	5368	5146	5/19/16	2/21/17	Scaffold	SC	SAMEA2273678	GCA_900084005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/005/GCA_900084005.1_11983_8_35	-	2880STDY5682602
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.50073	56.7	-	NCWO01	145	4370	4136	4/24/17	4/26/17	Contig	FDA/CFSAN	SAMN06712283	GCA_002107815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/815/GCA_002107815.1_ASM210781v1	-	MOD1-cr2
Mycobacterium abscessus MAB_091912_2455	1335415	PRJNA203570	203570	Terrabacteria group	Actinobacteria	4.82925	64.2	-	JAOV01	2	4827	4713	1/27/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02641618	GCA_000523915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/915/GCA_000523915.1_ASM52391v1	-	MAB_091912_2455
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.34924	63.1	-	DDAO01	24	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452162	GCA_002333255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/255/GCA_002333255.1_ASM233325v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.36	67.3	-	LOZM01	89	6655	6319	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449322	GCA_001527525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/525/GCA_001527525.1_ASM152752v1	-	MSMB1758
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	4.12542	38.8	-	MDIW01	109	4044	3880	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022846	GCA_001706645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/645/GCA_001706645.1_ASM170664v1	-	-
Citrobacter freundii	546	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.69568	51.7	-	NGRB01	6	5758	5408	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521890	GCA_002151775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/775/GCA_002151775.1_ASM215177v1	-	MGH141
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.17976	54.9	-	JZZE01	111	5109	4880	3/19/15	3/25/17	Contig	JCVI	SAMN03283669	GCA_000958025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/025/GCA_000958025.1_ASM95802v1	-	35658
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.08894	55.1	-	LRCW01	168	5124	4744	1/19/16	4/6/17	Contig	JCVI	SAMN04407793	GCA_001518675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/675/GCA_001518675.1_ASM151867v1	-	GN05748
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.88333	64.2	-	FVJE01	15	4805	4650	3/10/17	3/18/17	Scaffold	SC	SAMEA2275681	GCA_900134425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/425/GCA_900134425.1_12163_1_35	-	959
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.7863	66.6	-	LPKH01	118	8157	7718	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449614	GCA_001532125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/125/GCA_001532125.1_ASM153212v1	-	MSMB616WGS
Pseudomonas sp. HMSC067D05	1739293	PRJNA299943	299943	Proteobacteria	Gammaproteobacteria	6.29751	66.5	-	LTGM01	69	6061	5851	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477610	GCA_001811215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/215/GCA_001811215.1_ASM181121v1	-	HMSC067D05
Streptomyces sp. NRRL S-481	1463911	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.36009	69.9	-	JOCV01	106	8174	6343	7/1/14	3/11/17	Scaffold	University of Illinois	SAMN02645428	GCA_000721955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/955/GCA_000721955.1_ASM72195v1	-	NRRL S-481
Bacillus sp. JCM 19045	1460639	PRJDB1617	238521	Terrabacteria group	Firmicutes	4.31492	41	-	BAWA01	62	4776	3756	2/18/14	4/9/17	Contig	"Microbe Division/JCM, RIKEN BioResource Center"	SAMD00009117	GCA_000576325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/325/GCA_000576325.1_ASM57632v1	24652985	JCM 19045
Acinetobacter sp. 259052	1310695	PRJNA194771	194771	Proteobacteria	Gammaproteobacteria	4.13812	38.9	-	JEYJ01	124	4149	3746	2/25/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02385043	GCA_000582095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/095/GCA_000582095.1_ASM58209v1	-	259052
Sphingomonas sp. Ndbn-20	1666951	PRJNA286170	286170	Proteobacteria	Alphaproteobacteria	5.35143	65.4	-	LGVA01	127	5115	4924	8/11/16	4/13/17	Contig	Nanjing Agricultural University	SAMN03765701	GCA_001703815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/703/815/GCA_001703815.1_ASM170381v1	-	Ndbn-20
Clostridium sp. CAG:413	1262803	PRJEB873	206795	Terrabacteria group	Firmicutes	2.46512	52.3	-	CBES01	81	2231	2197	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138476	GCA_000431775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/775/GCA_000431775.1_MGS413	-	-
Rhodococcus sp. 06-1460-1B	2022501	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.78255	64.6	-	NOYS01	46	5496	5367	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376371	GCA_002258475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/475/GCA_002258475.1_ASM225847v1	-	06-1460-1B
Enterobacter cloacae complex sp. GN02208	1870943	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.87825	56.1	-	LDCK01	40	4647	4471	5/21/15	4/20/17	Contig	JCVI	SAMN03495975	GCA_001011955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/955/GCA_001011955.1_ASM101195v1	-	GN02208
Staphylococcus sp. HMSC061H04	1739521	PRJNA300172	300172	Terrabacteria group	Firmicutes	2.53844	32.6	-	LTTD01	87	2521	2394	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480438	GCA_001815345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/345/GCA_001815345.1_ASM181534v1	-	HMSC061H04
Corynebacterium sp. HMSC075D04	1739540	PRJNA300191	300191	Terrabacteria group	Actinobacteria	2.46126	61.5	-	LTSO01	93	2329	2205	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480462	GCA_001815635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/635/GCA_001815635.1_ASM181563v1	-	HMSC075D04
Arthrobacter sp. 49Tsu3.1M3	1279029	PRJEB19692	377480	Terrabacteria group	Actinobacteria	4.54288	67	-	FUZD01	49	4174	3978	3/8/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660473	GCA_900168135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/135/GCA_900168135.1_IMG-taxon_2519899654_annotated_assembly	-	49Tsu3.1M3
Streptococcus sp. HMSC056D01	1715058	PRJNA296186	296186	Terrabacteria group	Firmicutes	2.061	35.1	-	LTRC01	27	2104	2007	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498586	GCA_001836345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/345/GCA_001836345.1_ASM183634v1	-	HMSC056D01
Mycobacterium sp. 852014-51730_SCH5271717	1834114	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.29737	67.7	-	LZSM01	66	5102	4967	6/17/16	4/12/17	Contig	JCVI	SAMN04691997	GCA_001665755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/755/GCA_001665755.1_ASM166575v1	-	852014-51730_SCH5271717
Prevotella sp. UBA731	1947215	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.93819	46.5	-	DBLF01	131	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453415	GCA_002297965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/297/965/GCA_002297965.1_ASM229796v1	28894102	-
Paenibacillus sp. 7516	2022549	PRJNA395369	395369	Terrabacteria group	Firmicutes	6.55972	47	-	NPBI01	67	5890	5763	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372680	GCA_002272715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/715/GCA_002272715.1_assembly-7516_v1	-	7516
uncultured Ruminococcus sp.	165186	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.65714	36.9	-	FMGJ01	129	2619	2574	8/16/16	8/16/16	Scaffold	SC	SAMEA3545397	GCA_900066845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/845/GCA_900066845.1_14207_7_57	-	-
Prochlorococcus sp. scB243_496E10	1471479	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.09783	31.3	-	JFMD01	411	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671350	GCA_000634895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/895/GCA_000634895.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. P0087	1895598	PRJNA341016	341016	Proteobacteria	delta/epsilon subdivisions	1.61135	33.7	-	MJKC01	18	1685	1601	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687036	GCA_002139505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/505/GCA_002139505.1_ASM213950v1	28854596	P0087
Rhizobium sp. Leaf155	1736278	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.94214	58.2	-	LMOT01	12	4637	4518	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151658	GCA_001424245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/245/GCA_001424245.1_Leaf155	26633631	Leaf155
Mesorhizobium sp. WSM3866	422271	PRJNA399611	399611	Proteobacteria	Alphaproteobacteria	6.44703	63.1	-	NSGC01	62	6273	5846	9/12/17	9/14/17	Contig	Curtin University	SAMN07540842	GCA_002294795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/795/GCA_002294795.1_ASM229479v1	-	WSM3866
Microbacterium sp. SCN 70-10	1660117	PRJNA279279	279279	Terrabacteria group	Actinobacteria	1.17044	70.4	-	MEFZ01	160	1172	935	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652502	GCA_001725685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/685/GCA_001725685.1_ASM172568v1	26031303	-
Bacillus velezensis	492670	PRJEB15987	348274	Terrabacteria group	Firmicutes	3.88526	46.4	-	FNER01	16	3869	3674	10/20/16	3/22/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05192538	GCA_900100225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/225/GCA_900100225.1_IMG-taxon_2654588201_annotated_assembly	-	CBMB205
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.80267	57	-	FXRN01	111	5874	5505	4/28/17	5/6/17	Scaffold	SC	SAMEA2609524	GCA_900181925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/925/GCA_900181925.1_14936_2_49	-	3189STDY5864902
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.75283	32.3	-	FQLB01	14	2732	2557	11/23/16	4/5/17	Scaffold	SC	SAMEA3449114	GCA_900126835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/835/GCA_900126835.1_17175_3_58	-	3688STDY6125112
Xanthomonas phaseoli pv. syngonii LMG 9055	1437878	PRJNA254370	254370	Proteobacteria	Gammaproteobacteria	4.97171	64.8	-	JPUO02	256	4346	3790	10/23/15	4/3/17	Contig	Institute for Agricultural and Fisheries Research (ILVO)	SAMN02903174	GCA_001412025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/025/GCA_001412025.2_ASM141202v2	-	LMG 9055
Xanthomonas phaseoli pv. syngonii LMG 9055	1437878	PRJNA232102	232102	Proteobacteria	Gammaproteobacteria	5.00359	64.8	-	LSLD01	6	-	-	5/8/16	5/8/16	Scaffold	CIRAD	SAMN04481177	GCA_001640215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/215/GCA_001640215.1_Xas-LMG9055-G1	-	LMG 9055
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.85214	32.3	-	FQLH01	15	2885	2710	11/23/16	4/5/17	Scaffold	SC	SAMEA3449118	GCA_900126875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/875/GCA_900126875.1_17175_3_62	-	3688STDY6125116
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.79429	57	-	FXRO01	111	5867	5487	4/28/17	5/6/17	Scaffold	SC	SAMEA2609522	GCA_900181935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/935/GCA_900181935.1_14936_2_48	-	3189STDY5864901
Frischella perrara	1267021	PRJNA254159	254159	Proteobacteria	Gammaproteobacteria	2.69235	34.1	chromosome:NZ_CP009056.1/CP009056.1	-	1	2350	2246	12/23/14	4/10/17	Complete Genome	University of Lausanne	SAMN02900470	GCA_000807275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/275/GCA_000807275.1_ASM80727v1	25527542	PEB0191
Microbacterium sp. SCN 71-21	1660116	PRJNA279279	279279	Terrabacteria group	Actinobacteria	2.63842	70.6	-	MEGA01	127	2586	2373	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652503	GCA_001725695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/695/GCA_001725695.1_ASM172569v1	26031303	-
Mesorhizobium sp. WSM4312	2029411	PRJNA399611	399611	Proteobacteria	Alphaproteobacteria	7.06009	62.9	-	NSFU01	57	6920	6501	9/12/17	9/14/17	Contig	Curtin University	SAMN07540850	GCA_002294875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/875/GCA_002294875.1_ASM229487v1	-	WSM4312
Rhizobium sp. Leaf341	1736344	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	4.6568	63.3	-	LMPE01	16	4189	4084	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151734	GCA_001424325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/325/GCA_001424325.1_Leaf341	26633631	Leaf341
Campylobacter sp. P0094	1895600	PRJNA341018	341018	Proteobacteria	delta/epsilon subdivisions	1.55857	33.7	-	MJKE01	26	1594	1512	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687038	GCA_002139535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/535/GCA_002139535.1_ASM213953v1	28854596	P0094
Prochlorococcus sp. scB243_496G15	1471480	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.37831	31.2	-	JFME01	296	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671351	GCA_000634915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/915/GCA_000634915.1_De_novo_assembly_of_single-cell_genomes	24763590	-
uncultured Ruminococcus sp.	165186	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.01375	46.4	-	FMGN01	31	2892	2841	8/16/16	8/16/16	Scaffold	SC	SAMEA3545401	GCA_900066885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/885/GCA_900066885.1_14207_7_61	-	-
Paenibacillus sp. 7541	2026236	PRJNA395369	395369	Terrabacteria group	Firmicutes	5.42712	52.2	-	NQLZ01	93	4883	4724	8/29/17	8/30/17	Contig	Bielefeld University	SAMN07372706	GCA_002276395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/395/GCA_002276395.1_ASM227639v1	-	7541
Prevotella sp. UBA730	1947214	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.46692	56.1	-	DBLG01	136	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453414	GCA_002298005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/005/GCA_002298005.1_ASM229800v1	28894102	-
Mycobacterium sp. 852013-50142_SCH4511227	1834110	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.62763	68.6	-	LZST01	217	5509	5165	6/17/16	4/12/17	Contig	JCVI	SAMN04856196	GCA_001665825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/825/GCA_001665825.1_ASM166582v1	-	852013-50142_SCH4511227
Streptococcus sp. HMSC063B03	1715107	PRJNA296235	296235	Terrabacteria group	Firmicutes	2.01744	39.9	-	LTPX01	60	2054	1889	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498613	GCA_001836965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/965/GCA_001836965.1_ASM183696v1	-	HMSC063B03
Arthrobacter sp. 31Cvi3.1E	1279032	PRJEB19707	377499	Terrabacteria group	Actinobacteria	4.53817	63.1	-	FUZB01	40	4280	4124	3/8/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660916	GCA_900168225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/225/GCA_900168225.1_IMG-taxon_2519899686_annotated_assembly	-	31Cvi3.1E
Corynebacterium sp. HMSC064E07	1739545	PRJNA300196	300196	Terrabacteria group	Actinobacteria	2.45052	58.9	-	LTSJ01	40	2168	2085	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480461	GCA_001815745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/745/GCA_001815745.1_ASM181574v1	-	HMSC064E07
Staphylococcus sp. HMSC060D01	1739530	PRJNA300181	300181	Terrabacteria group	Firmicutes	2.81053	32.7	-	LTSW01	75	2963	2835	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480445	GCA_001815475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/475/GCA_001815475.1_ASM181547v1	-	HMSC060D01
Enterobacter cloacae complex sp. GN02440	1870944	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.98778	55.8	-	LEET01	58	4835	4634	6/9/15	4/20/17	Contig	JCVI	SAMN03732705	GCA_001022415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/415/GCA_001022415.1_ASM102241v1	-	GN02440
Rhodococcus sp. 05-2256-B2	2022493	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.76799	64.4	-	NOYZ01	49	5477	5311	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376363	GCA_002258485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/485/GCA_002258485.1_ASM225848v1	-	05-2256-B2
Clostridium sp. CAG:302	1262793	PRJEB819	206826	Terrabacteria group	Firmicutes	1.24129	26.8	-	CBEJ01	25	1281	1248	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138477	GCA_000431795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/795/GCA_000431795.1_MGS302	-	-
Sphingomonas sp. MCT13	1888892	PRJNA338394	338394	Proteobacteria	Alphaproteobacteria	4.09948	65.3	-	MDDS01	86	4010	3862	9/7/16	3/15/17	Contig	University of Siena	SAMN05554396	GCA_001721295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/295/GCA_001721295.1_ASM172129v1	-	MCT13
Acinetobacter sp. 983759	1310660	PRJNA194736	194736	Proteobacteria	Gammaproteobacteria	3.30176	41.7	-	JEXO01	90	3214	2978	2/25/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02384925	GCA_000582135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/135/GCA_000582135.1_ASM58213v1	-	983759
Bacillus sp. JCM 19046	1460640	PRJDB1618	238522	Terrabacteria group	Firmicutes	4.31253	41	-	BAWB01	95	4852	3576	2/18/14	4/9/17	Contig	"Microbe Division/JCM, RIKEN BioResource Center"	SAMD00008838	GCA_000576345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/345/GCA_000576345.1_ASM57634v1	24652985	JCM 19046
Streptomyces sp. NRRL S-474	1463909	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.10244	70.9	-	JODD01	64	7399	6905	7/1/14	3/11/17	Scaffold	University of Illinois	SAMN02645436	GCA_000722015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/015/GCA_000722015.1_ASM72201v1	-	NRRL S-474
Pseudomonas sp. HMSC066B03	1739334	PRJNA299984	299984	Proteobacteria	Gammaproteobacteria	6.411	66.4	-	LTFB01	115	6116	5920	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477643	GCA_001811975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/975/GCA_001811975.1_ASM181197v1	-	HMSC066B03
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.37219	66.8	-	LPKC01	75	7780	7441	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449608	GCA_001532235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/235/GCA_001532235.1_ASM153223v1	-	MSMB593WGS
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.19362	64.1	-	FSFA01	18	5259	5048	12/14/16	3/21/17	Scaffold	SC	SAMEA2275694	GCA_900134535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/535/GCA_900134535.1_12163_1_44	-	968
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.13632	55.1	-	LRJR01	55	5081	4848	1/22/16	4/6/17	Contig	JCVI	SAMN04430995	GCA_001525245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/245/GCA_001525245.1_ASM152524v1	-	SMART_1372
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.78144	55.5	-	JZXS01	58	4704	4524	3/19/15	3/25/17	Contig	JCVI	SAMN03283648	GCA_000958065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/065/GCA_000958065.1_ASM95806v1	-	44589
Citrobacter freundii	546	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.22308	51.7	-	NGRE01	4	5171	4904	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521895	GCA_002151785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/785/GCA_002151785.1_ASM215178v1	-	MGH146
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	3.91975	38.7	-	MDIZ01	42	3797	3634	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022849	GCA_001706665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/665/GCA_001706665.1_ASM170666v1	-	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.74067	67	-	LOZW01	186	6997	6515	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449332	GCA_001527745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/745/GCA_001527745.1_ASM152774v1	-	MSMB1969
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.4893	64.1	-	DDCP01	28	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454193	GCA_002335105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/105/GCA_002335105.1_ASM233510v1	28894102	-
Mycobacterium abscessus MAB_110811_2726	1335417	PRJNA203572	203572	Terrabacteria group	Actinobacteria	5.30838	64	-	JAOT01	14	5371	5148	1/27/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02641620	GCA_000523935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/935/GCA_000523935.1_ASM52393v1	-	MAB_110811_2726
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.44833	56.8	-	NCWP01	257	4353	4034	4/24/17	4/26/17	Contig	FDA/CFSAN	SAMN06712282	GCA_002107855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/855/GCA_002107855.1_ASM210785v1	-	MOD1-cr4
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.27039	54.8	-	FKYP01	54	6122	5847	5/19/16	2/21/17	Scaffold	SC	SAMEA2273869	GCA_900084015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/015/GCA_900084015.1_12082_2_4	-	2880STDY5682795
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.24233	55.2	-	JUXG01	281	5188	4962	7/10/15	3/26/17	Contig	University of Washington	SAMN03197886	GCA_001057935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/935/GCA_001057935.1_ASM105793v1	26230489	683_ECLO
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.60887	32.6	-	CUDY01	78	2596	2472	3/31/15	3/26/17	Contig	SC	SAMEA1035049	GCA_001239605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/605/GCA_001239605.1_7067_4_64	-	51-43
Propionibacterium acnes PRP-38	1136877	PRJNA81741	81741	Terrabacteria group	Actinobacteria	2.50743	60.2	-	AIJP01	12	2517	2329	3/9/12	3/30/17	Contig	BAYGEN	SAMN02469319	GCA_000252385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/385/GCA_000252385.2_ASM25238v2	22628495	PRP-38
Burkholderia sp. AU33423	2015355	PRJNA391085	391085	Proteobacteria	Betaproteobacteria	8.32859	66.6	-	NKFH01	11	7685	7349	7/20/17	7/22/17	Contig	University of Michigan	SAMN07257390	GCA_002223135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/135/GCA_002223135.1_ASM222313v1	-	AU33423
Campylobacter coli BIGS0001	1247727	PRJNA177352	177352	Proteobacteria	delta/epsilon subdivisions	1.75269	31.4	-	ANGL01	167	1848	1666	11/23/12	3/15/17	Contig	Swansea University	SAMN01795757	GCA_000321325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/325/GCA_000321325.1_ASM32132v1	23279096	BIGS0001
Lactobacillus plantarum	1590	PRJNA314084	314084	Terrabacteria group	Firmicutes	3.17943	44.6	-	LUWS01	30	3068	2913	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04528806	GCA_001633385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/385/GCA_001633385.1_ASM163338v1	-	Nizo2726
Serratia marcescens	615	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.49907	59.7	-	NPGI01	55	5283	5064	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07345017	GCA_002264105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/105/GCA_002264105.1_ASM226410v1	-	SE768
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.45145	46.9	-	CQAY01	123	4188	3930	3/23/15	3/26/17	Scaffold	SC	SAMEA980213	GCA_001102185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/185/GCA_001102185.1_4976_6_1	-	ERL073627
Corynebacterium diphtheriae	1717	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.48013	53.6	-	MSIH01	34	2448	2256	6/20/17	6/22/17	Contig	Northumbria University	SAMN06174239	GCA_002201145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/145/GCA_002201145.1_ASM220114v1	-	50
Candidatus Endolissoclinum faulkneri L2	1193729	PRJNA164601	164601	Proteobacteria	Alphaproteobacteria	1.48119	34.1	chromosome:NC_019566.1/CP003539.1	-	1	867	778	11/28/12	4/8/17	Complete Genome	University of Utah	SAMN02604248	GCA_000319385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/385/GCA_000319385.1_ASM31938v1	23185008	L2
Brucella melitensis S66	1148757	PRJNA82603	82603	Proteobacteria	Alphaproteobacteria	3.28728	57.3	-	AHWB01	73	3314	3140	2/28/12	3/30/17	Contig	"Chinese PLA Institute for Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN02469569	GCA_000250775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/775/GCA_000250775.2_ASM25077v2	22965081	S66
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.90641	46.7	-	JTIR01	86	2944	2729	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196647	GCA_001657135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/135/GCA_001657135.1_ASM165713v1	-	Lrh13
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.2941	40.3	-	LQET01	32	2157	2057	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366541	GCA_001930525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/525/GCA_001930525.1_ASM193052v1	-	2668PM
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12662	41.2	-	CWGD01	80	2046	1876	6/23/15	3/26/17	Contig	SC	SAMEA1032846	GCA_001176585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/585/GCA_001176585.1_6817_2_77	-	EQUI0030
Stenotrophomonas maltophilia	40324	PRJNA390523	390523	Proteobacteria	Gammaproteobacteria	4.72589	66.4	-	NIVU01	129	4391	4253	6/22/17	6/24/17	Contig	JCVI	SAMN07237141	GCA_002205295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/295/GCA_002205295.1_ASM220529v1	-	7141307
Enterococcus faecium 513	1134811	PRJNA82009	82009	Terrabacteria group	Firmicutes	2.86202	37.7	-	AMBG01	211	2922	2776	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299486	GCA_000295575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/575/GCA_000295575.2_ASM29557v2	-	513
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.147	52.4	-	CQIQ01	73	2528	2205	3/23/15	4/11/17	Contig	SC	SAMEA1690420	GCA_001092945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/945/GCA_001092945.1_8289_2_56	-	GCGS056
Streptococcus mutans R221	857101	PRJNA49863	49863	Terrabacteria group	Firmicutes	1.98372	36.8	-	AHRG01	109	1977	1887	2/11/13	3/23/17	Contig	Cornell University	SAMN02429034	GCA_000339115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/115/GCA_000339115.1_ASM33911v1	23228887	R221
Enterococcus faecalis ERV85	1134799	PRJNA81987	81987	Terrabacteria group	Firmicutes	3.12947	37.3	-	ALZX01	121	3241	3057	8/27/12	3/27/17	Scaffold	Washington University	SAMN02299475	GCA_000294285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/285/GCA_000294285.2_ASM29428v2	-	ERV85
Clostridium botulinum	1491	PRJNA239370	239370	Terrabacteria group	Firmicutes	3.89873	28.2	-	JFGJ01	456	3815	3270	7/18/14	3/24/17	Contig	Centers for Disease Control and Prevention	SAMN02664946	GCA_000730925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/925/GCA_000730925.1_ASM73092v1	25031122	CDC37457
Acidianus hospitalis W1	933801	PRJNA60875	60875	TACK group	Crenarchaeota	2.13765	34.1	chromosome:NC_015518.1/CP002535.1	-	1	2488	2332	5/12/11	4/17/17	Complete Genome	"Archaea Centre, Department of Biology, University of Copenhagen, Copenhagen 2200 N, Denmark"	SAMN02602984	GCA_000213215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/215/GCA_000213215.1_ASM21321v1	21607549	W1
Bacillus subtilis PTS-394	1398775	PRJNA218603	218603	Terrabacteria group	Firmicutes	4.00579	43.7	-	AWXG01	34	4086	3967	12/12/13	3/24/17	Contig	Jiangsu Institute of Plant Protection	SAMN02352513	GCA_000507005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/507/005/GCA_000507005.1_PTS394	24526631	PTS-394
Vibrio parahaemolyticus	670	PRJNA327110	327110	Proteobacteria	Gammaproteobacteria	5.46434	45.1	-	MBOX01	72	5259	4997	5/16/17	5/24/17	Scaffold	Health Canada	SAMN05301458	GCA_002144535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/535/GCA_002144535.1_ASM214453v1	-	04-2548_100
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.93706	37.7	-	MLMV01	527	2009	1711	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297061	GCA_001867955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/955/GCA_001867955.1_ASM186795v1	27118061	AWRIB392
Xanthomonas oryzae pv. oryzae	64187	PRJNA269421	269421	Proteobacteria	Gammaproteobacteria	4.2556	63.9	-	JXER01	439	4192	3422	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252518	GCA_001928345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/345/GCA_001928345.1_ASM192834v1	-	DXO-116
Xanthomonas citri subsp. citri	611301	PRJEB7198	265976	Proteobacteria	Gammaproteobacteria	5.287	64.6	-	CDAN01	1150	5162	4267	11/4/14	4/2/17	Contig	CIRAD	SAMEA2827232	GCA_000825485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/485/GCA_000825485.1_XACG102	-	LG102
Brucella abortus B10-0091	1328359	PRJNA200943	200943	Proteobacteria	Alphaproteobacteria	3.28659	57.2	-	ATGM01	4	3380	3149	6/21/13	3/24/17	Scaffold	Broad Institute	SAMN02092522	GCA_000413955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/955/GCA_000413955.1_Bruc_abor_biovar_1_B10-0091_V1	-	B10-0091
Francisella tularensis	263	PRJNA253675	253675	Proteobacteria	Gammaproteobacteria	1.81155	32.4	-	JPMT01	98	1898	1565	2/25/16	4/5/17	Contig	Swedish Defence Research Agency	SAMN02886896	GCA_001574865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/865/GCA_001574865.1_ASM157486v1	-	FDC201
Clostridioides difficile CD51	1151272	PRJNA85717	85717	Terrabacteria group	Firmicutes	4.01159	28.2	-	AVHC01	146	3745	3529	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766622	GCA_000449145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/145/GCA_000449145.2_ASM44914v2	-	CD51
Vibrio cholerae HC-17A1	991951	PRJNA63909	63909	Proteobacteria	Gammaproteobacteria	4.17436	47.2	-	AJRN01	405	3937	3731	10/10/12	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00722973	GCA_000304935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/935/GCA_000304935.2_ASM30493v2	-	HC-17A1
Bacillus thuringiensis serovar sumiyoshiensis	180861	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.29341	34.8	-	NFCM01	98	6572	6094	5/17/17	5/24/17	Contig	Huazhong Agricultural University	SAMN05934500	GCA_002146405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/405/GCA_002146405.1_ASM214640v1	-	BGSC 4AO1
Chlamydia trachomatis L2b/Ams4	1071781	PRJEA71123	71123	PVC group	Chlamydiae	1.04638	41.2634	chromosome:NC_020978.1/HE601964.1; plasmid pAms4:NC_020981.1/HE603216.1	-	2	973	902	3/13/12	3/23/17	Chromosome	Sanger Institute	SAMEA2272333	GCA_000319065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/065/GCA_000319065.1_ASM31906v1	22406642	L2b/Ams4
Burkholderia pseudomallei MSHR346	536230	PRJNA29855	29855	Proteobacteria	Betaproteobacteria	7.34894	67.8769	chromosome I:NC_012695.1/CP001408.1	ACOJ01	2	7571	7000	5/12/09	5/18/17	Chromosome	Los Alamos National Laboratory	SAMN02470263	GCA_000182585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/182/585/GCA_000182585.2_ASM18258v2	-	MSHR346
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.94694	67	-	MURW01	159	7698	7142	2/10/17	4/2/17	Contig	University of British Columbia	SAMN05001860	GCA_001991995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/995/GCA_001991995.1_ASM199199v1	-	VC7579
Lactobacillus reuteri	1598	PRJNA384810	384810	Terrabacteria group	Firmicutes	2.21664	38.3	-	NGQF01	97	2189	2022	8/15/17	8/17/17	Scaffold	University of Alberta	SAMN06848373	GCA_002254255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/254/255/GCA_002254255.1_ASM225425v1	-	103b
Bacteroides fragilis	817	PRJNA244942	244942	FCB group	Bacteroidetes/Chlorobi group	5.37648	43.5	-	JMZX02	213	4710	4390	6/19/14	4/2/17	Contig	Odense University Hospital	SAMN02730069	GCA_000710365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/365/GCA_000710365.2_DCMSKEJBY0001B2.0	-	DCMSKEJBY0001B
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.06708	50.6	-	NQAJ01	163	5362	4983	8/11/17	8/15/17	Contig	JCVI	SAMN07450578	GCA_002246515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/515/GCA_002246515.1_ASM224651v1	-	ECCTRPRTH04
Legionella pneumophila	446	PRJNA281033	281033	Proteobacteria	Gammaproteobacteria	3.33854	38.4	-	LAXT01	53	3057	2936	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03481609	GCA_001582225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/225/GCA_001582225.1_ASM158222v1	26888563	ATCC 35096
Pseudomonas syringae CC1416	1357271	PRJNA211384	211384	Proteobacteria	Gammaproteobacteria	5.92193	59	-	AVEP02	336	5416	5123	8/20/13	3/24/17	Contig	University of Arizona	SAMN02471560	GCA_000452845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/845/GCA_000452845.2_CC1416_092313_2.0	24459267	CC1416
Streptococcus suis YS39	1214200	PRJNA171462	171462	Terrabacteria group	Firmicutes	2.23988	41	-	ALMO01	80	2272	2111	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469527	GCA_000441235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/235/GCA_000441235.1_version1	-	YS39
Streptococcus agalactiae GB00245	1154911	PRJNA86495	86495	Terrabacteria group	Firmicutes	1.92928	35.2	-	ALTF01	18	1964	1860	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991186	GCA_000288335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/335/GCA_000288335.1_ASM28833v1	-	GB00245
Acinetobacter baumannii Ab33333	1168590	PRJNA157167	157167	Proteobacteria	Gammaproteobacteria	3.83503	39	-	AKAS01	11	3621	3473	9/17/12	3/15/17	Scaffold	Broad Institute	SAMN02596917	GCA_000297935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/935/GCA_000297935.1_Acin_baum_Ab33333_V1	-	Ab33333
Thermoanaerobacterium thermosaccharolyticum DSM 571	580327	PRJNA33165	33165	Terrabacteria group	Firmicutes	2.78575	34.1	chromosome:NC_014410.1/CP002171.1	-	1	2762	2566	8/13/10	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002542	GCA_000145615.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/615/GCA_000145615.1_ASM14561v1	-	DSM 571
Bifidobacterium longum subsp. longum	1679	PRJNA297703	297703	Terrabacteria group	Actinobacteria	2.23558	60	-	LKSU01	36	1915	1789	11/25/15	4/4/17	Scaffold	UC Davis	SAMN04129533	GCA_001447975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/447/975/GCA_001447975.1_ASM144797v1	26571226	7
Shigella flexneri	623	PRJNA385907	385907	Proteobacteria	Gammaproteobacteria	4.56582	50.5	-	NGWD01	446	5213	4193	6/6/17	6/8/17	Contig	Christian Medical College	SAMN06920481	GCA_002174695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/695/GCA_002174695.1_ASM217469v1	-	FC906
Bacillus anthracis CZC5	1439874	PRJDB1571	236719	Terrabacteria group	Firmicutes	5.45434	35.1	-	BAVT01	25	6126	5715	1/29/14	3/24/17	Contig	Research Center for Zoonosis Control	SAMD00002586	GCA_000534935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/935/GCA_000534935.1_ASM53493v1	24604644	CZC5
Leptospira interrogans serovar Copenhageni str. Fiocruz LV4173	1291337	PRJNA189004	189004	Spirochaetes	Spirochaetia	4.61193	35	-	AOVM01	142	4122	3751	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920631	GCA_000343225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/225/GCA_000343225.1_CA_glsol138	-	Fiocruz LV4173
Streptococcus pyogenes ABC020013551	1439004	PRJNA233221	233221	Terrabacteria group	Firmicutes	1.89543	38.5	-	JJFX01	2	1974	1846	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567570	GCA_000630085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/085/GCA_000630085.1_Stre_pyog_ABC020013551_V1	-	ABC020013551
Neisseria meningitidis K1207	768485	PRJNA49309	49309	Proteobacteria	Betaproteobacteria	2.14003	51.6675	plasmid unnamed:NZ_CM000956.1/CM000956.2	ADWM02	41	2415	2105	7/9/10	3/15/17	Scaffold	university of Padua	SAMN00014633	GCA_000144995.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/995/GCA_000144995.3_K1207_nm2.0	20675487	-
Thermoanaerobacter italicus Ab9	580331	PRJNA33157	33157	Terrabacteria group	Firmicutes	2.45106	34.1	chromosome:NC_013921.1/CP001936.1	-	1	2443	2265	2/24/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598495	GCA_000025645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/645/GCA_000025645.1_ASM2564v1	-	Ab9
Streptococcus pneumoniae SP23-BS72	406563	PRJNA17971	17971	Terrabacteria group	Firmicutes	2.10229	39.7	-	ABAG01	32	2303	2060	5/22/07	3/9/17	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393750	GCA_000170155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/155/GCA_000170155.1_ASM17015v1	17675389	SP23-BS72
Thermodesulfovibrio yellowstonii DSM 11347	289376	PRJNA30733	30733	Nitrospirae	Nitrospira	2.0038	34.1	chromosome:NC_011296.1/CP001147.1	-	1	2084	2028	9/26/08	8/3/16	Complete Genome	The J. Craig Venter Institute	SAMN02603929	GCA_000020985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/985/GCA_000020985.1_ASM2098v1	-	DSM 11347
Mycobacterium tuberculosis TRS23	1334069	PRJNA203181	203181	Terrabacteria group	Actinobacteria	4.41153	65.6	chromosome:NZ_CP009180.1/CP009180.1	-	1	4285	4111	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837643	GCA_001998105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/105/GCA_001998105.1_ASM199810v1	27261264	TRS23
Haemophilus influenzae	727	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	1.83207	37.9	-	JVEZ01	58	1819	1705	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197685	GCA_001076835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/835/GCA_001076835.1_ASM107683v1	26230489	492_HINF
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.25157	69	-	BDNB01	313	5018	4712	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076654	GCA_002089235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/235/GCA_002089235.1_ASM208923v1	28045086	HF-1
Lactococcus lactis subsp. cremoris	1359	PRJNA286840	286840	Terrabacteria group	Firmicutes	2.3672	35.5	-	LISZ01	271	2410	2080	4/18/16	4/5/17	Contig	Radboudumc	SAMN03770944	GCA_001622295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/295/GCA_001622295.1_ASM162229v1	-	LMG6897
Bacillus cereus VD107	1053229	PRJNA70425	70425	Terrabacteria group	Firmicutes	5.37228	35.4	-	AHEX01	7	5713	5211	8/15/12	6/15/17	Scaffold	Broad Institute	SAMN02596861	GCA_000290855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/855/GCA_000290855.1_Baci_cere_VD107_V1	-	VD107
Staphylococcus epidermidis	1282	PRJNA246628	246628	Terrabacteria group	Firmicutes	2.54012	31.8	-	JQHC01	63	2550	2414	10/6/14	3/24/17	Contig	Universiti of Malaya	SAMN02996614	GCA_000763625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/625/GCA_000763625.1_ASM76362v1	-	C10C
Petrotoga mobilis SJ95	403833	PRJNA17679	17679	Thermotogae	Thermotogae	2.16955	34.1	chromosome:NC_010003.1/CP000879.1	-	1	2020	1938	11/16/07	4/6/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00623056	GCA_000018605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/605/GCA_000018605.1_ASM1860v1	-	SJ95
Pseudomonas fluorescens Wayne1	1007656	PRJNA65793	65793	Proteobacteria	Gammaproteobacteria	6.85837	63.4	-	CADX01	90	6292	5846	6/22/11	5/19/17	Scaffold	The Ohio State University	SAMEA3138418	GCA_000285955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/955/GCA_000285955.1_ASM28595v1	-	Wayne1
Yersinia pestis subsp. microtus bv. Altaica	385967	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.63767	47.6	-	NHNA01	184	4439	4126	6/9/17	6/12/17	Scaffold	SRCAMB	SAMN05521435	GCA_002188755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/755/GCA_002188755.1_ASM218875v1	-	SCPM-O-DNA-10
Flavobacterium johnsoniae UW101	376686	PRJNA16082	16082	FCB group	Bacteroidetes/Chlorobi group	6.09687	34.1	chromosome:NC_009441.1/CP000685.1	-	1	5251	5113	5/1/07	5/18/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598357	GCA_000016645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/645/GCA_000016645.1_ASM1664v1	19717629	UW101; ATCC 17061
Trichodesmium erythraeum IMS101	203124	PRJNA318	318	Terrabacteria group	Cyanobacteria/Melainabacteria group	7.75011	34.1	chromosome:NC_008312.1/CP000393.1	-	1	5212	4549	7/6/06	4/6/17	Complete Genome	DOE Joint Genome Institute	SAMN02598485	GCA_000014265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/265/GCA_000014265.1_ASM1426v1	-	IMS101
Vagococcus teuberi	519472	PRJNA343195	343195	Terrabacteria group	Firmicutes	2.18429	34.0791	chromosome:NZ_CP017267.1/CP017267.1; plasmid pTB1:NZ_CP017268.1/CP017268.1	-	2	2155	2006	11/7/16	4/17/17	Complete Genome	ETH Zurich	SAMN05781328	GCA_001870205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/205/GCA_001870205.1_ASM187020v1	-	DSM 21459
Chryseobacterium sp. IHBB 10212	1685010	PRJNA313490	313490	FCB group	Bacteroidetes/Chlorobi group	4.87165	34.0371	chromosome:NZ_CP015199.1/CP015199.1; plasmid pMP01:NZ_CP015200.1/CP015200.1; plasmid pMP02:NZ_CP015201.1/CP015201.1	-	3	4419	4277	5/19/16	4/12/17	Complete Genome	CSIR-Institute of Himalayan Bioresource Technology	SAMN04524003	GCA_001648155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/155/GCA_001648155.1_ASM164815v1	-	IHBB 10212
Campylobacter hyointestinalis subsp. hyointestinalis LMG 9260	1031746	PRJNA66795	66795	Proteobacteria	delta/epsilon subdivisions	1.75338	34	chromosome:NZ_CP015575.1/CP015575.1	-	1	1805	1704	5/16/16	4/12/17	Complete Genome	"USDA, ARS, WRRC"	SAMN03737973	GCA_001643955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/955/GCA_001643955.1_ASM164395v1	27417840	LMG 9260
Wolbachia endosymbiont of Drosophila simulans wNo	1236908	PRJNA176302	176302	Proteobacteria	Alphaproteobacteria	1.30182	34	chromosome:NC_021084.1/CP003883.1	-	1	1226	1076	4/22/13	4/8/17	Complete Genome	Uppsala University	SAMN02604272	GCA_000376585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/585/GCA_000376585.1_ASM37658v1	23593012	wNo
Yersinia pestis subsp. microtus bv. Altaica	385967	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.61213	47.5	-	NHMX01	182	4441	4119	6/9/17	6/12/17	Scaffold	SRCAMB	SAMN05521432	GCA_002188765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/765/GCA_002188765.1_ASM218876v1	-	SCPM-O-DNA-07
Pseudomonas fluorescens	294	PRJNA262933	262933	Proteobacteria	Gammaproteobacteria	6.11281	60	-	JRXU01	34	5617	5415	12/16/14	4/2/17	Scaffold	"University of Michigan, Ann Arbor"	SAMN03086632	GCA_000801795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/795/GCA_000801795.1_PfAU6026	25635025	AU6026
Dictyoglomus turgidum DSM 6724	515635	PRJNA29175	29175	Dictyoglomi	Dictyoglomia	1.85556	34	chromosome:NC_011661.1/CP001251.1	-	1	1865	1742	12/12/08	8/3/16	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002661	GCA_000021645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/645/GCA_000021645.1_ASM2164v1	-	DSM 6724
Staphylococcus epidermidis	1282	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.57969	32.1	-	JTAY01	3	2566	2407	11/14/14	7/6/17	Contig	US Food and Drug Administration 	SAMN02934537	GCA_000783535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/535/GCA_000783535.1_ASM78353v1	-	FDAARGOS_83
Bacillus cereus VD102	1053228	PRJNA70423	70423	Terrabacteria group	Firmicutes	5.77333	35.4	-	AHEW01	12	6150	5814	8/15/12	5/18/17	Scaffold	Broad Institute	SAMN02596860	GCA_000290875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/875/GCA_000290875.1_Baci_cere_VD102_V1	-	VD102
Lactococcus lactis subsp. cremoris	1359	PRJNA286840	286840	Terrabacteria group	Firmicutes	2.00015	38.6	-	LITB01	29	1980	1893	4/18/16	4/10/17	Contig	Radboudumc	SAMN03770951	GCA_001622305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/305/GCA_001622305.1_ASM162230v1	-	P7266
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.258	68.9	-	BDNC01	399	5077	4714	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076655	GCA_002089255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/255/GCA_002089255.1_ASM208925v1	28045086	HF-3
Haemophilus influenzae	727	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	1.82864	37.9	-	LZDP01	21	1824	1690	7/5/16	3/28/17	Scaffold	TAILORED-Treatment project	SAMN05214360	GCA_001679235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/235/GCA_001679235.1_ASM167923v1	-	CCUG 26214
Mycobacterium tuberculosis TRS14	1334060	PRJNA203172	203172	Terrabacteria group	Actinobacteria	4.41153	65.4	chromosome:NZ_CP009181.1/CP009181.1	-	1	4275	4062	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837634	GCA_001998145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/145/GCA_001998145.1_ASM199814v1	27261264	TRS14
Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)	413404	PRJNA16841	16841	Proteobacteria	Gammaproteobacteria	1.16078	34	chromosome:NC_008610.1/CP000488.1	-	1	1099	1034	12/1/06	4/6/17	Complete Genome	DOE Joint Genome Institute	SAMN02598375	GCA_000015105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/105/GCA_000015105.1_ASM1510v1	17303757	Cm
Streptococcus pneumoniae CDC1873-00	453362	PRJNA20775	20775	Terrabacteria group	Firmicutes	2.26332	39.6	-	ABFS01	53	2526	2213	9/20/07	3/9/17	Contig	J. Craig Venter Institute	SAMN00000215	GCA_000171575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/575/GCA_000171575.1_ASM17157v1	-	CDC1873-00
Helicobacter pylori	210	PRJDB4296	362565	Proteobacteria	delta/epsilon subdivisions	1.61556	38.8786	chromosome:AP017360.1; plasmid pHPMKM5:AP017361.1	-	2	1581	1542	1/18/17	1/18/17	Chromosome	"Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture"	SAMD00042488	GCA_002357315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/315/GCA_002357315.1_ASM235731v1	-	MKM5
Neisseria meningitidis S0108	768484	PRJNA49311	49311	Proteobacteria	Betaproteobacteria	2.14581	51.6676	plasmid unnamed:NZ_CM000958.1/CM000958.2	ADWN02	41	2412	2120	7/9/10	3/15/17	Scaffold	university of Padua	SAMN00014634	GCA_000145015.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/015/GCA_000145015.3_S0108_nm2.0	20675487	S0108
Streptococcus pyogenes ABC020010041	1439001	PRJNA233218	233218	Terrabacteria group	Firmicutes	1.7939	38.5	-	JJFY01	2	1803	1678	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567567	GCA_000630105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/105/GCA_000630105.1_Stre_pyog_ABC020010041_V1	-	ABC020010041
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2919	1291336	PRJNA189003	189003	Spirochaetes	Spirochaetia	4.61309	35	-	AOVN01	144	4130	3759	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920118	GCA_000343245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/245/GCA_000343245.1_CA_glsol131	-	Fiocruz LV2919
Bacillus anthracis	1392	PRJNA242332	242332	Terrabacteria group	Firmicutes	5.43601	35.1	-	JHDS02	28	6053	5672	6/2/14	3/25/17	Contig	ANSES	SAMN02699416	GCA_000697555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/697/555/GCA_000697555.2_ASM69755v2	"2,473,487,225,081,250"	ANSES_00-82
Shigella flexneri	623	PRJNA385907	385907	Proteobacteria	Gammaproteobacteria	4.40225	50.8	-	NGWF01	530	5087	3975	6/6/17	6/8/17	Contig	Christian Medical College	SAMN06920479	GCA_002174725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/725/GCA_002174725.1_ASM217472v1	-	FC1846
Bifidobacterium longum subsp. longum	1679	PRJNA302102	302102	Terrabacteria group	Actinobacteria	2.28825	59.8	-	LNCM01	29	1952	1818	1/15/16	4/4/17	Scaffold	ICBFM SB RAS	SAMN04263942	GCA_001516925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/925/GCA_001516925.1_ASM151692v1	-	MC-42
Candidatus Nitrosocosmicus exaquare	1826872	PRJNA317395	317395	TACK group	Thaumarchaeota	2.98978	33.9	chromosome:CP017922.1	-	1	-	-	11/7/16	11/7/16	Complete Genome	University of Waterloo	SAMN04606696	GCA_001870125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/125/GCA_001870125.1_ASM187012v1	-	G61
Acinetobacter baumannii Ab44444	1168591	PRJNA157169	157169	Proteobacteria	Gammaproteobacteria	3.80134	39.1	-	AKAT01	6	3639	3469	9/17/12	3/15/17	Scaffold	Broad Institute	SAMN02596918	GCA_000297955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/955/GCA_000297955.1_Acin_baum_Ab44444_V1	-	Ab44444
Streptococcus agalactiae GB00279	1154914	PRJNA86501	86501	Terrabacteria group	Firmicutes	2.10613	35.4	-	ALTI01	27	2182	2062	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991181	GCA_000288355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/355/GCA_000288355.1_ASM28835v1	-	GB00279
Streptococcus suis YS3	1214196	PRJNA171463	171463	Terrabacteria group	Firmicutes	2.16903	41	-	ALMP01	68	2167	1996	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469565	GCA_000441255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/255/GCA_000441255.1_version1	-	YS3
Pseudomonas syringae CC1544	1357278	PRJNA211400	211400	Proteobacteria	Gammaproteobacteria	5.88355	59.1	-	AVEI02	376	5421	5180	8/20/13	3/24/17	Contig	University of Arizona	SAMN02471558	GCA_000452905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/905/GCA_000452905.2_CC1544_092313_2.0	24459267	CC1544
Legionella pneumophila	446	PRJNA281038	281038	Proteobacteria	Gammaproteobacteria	3.66181	38.3	-	LAXV01	45	3360	3205	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03481692	GCA_001582235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/235/GCA_001582235.1_ASM158223v1	26888563	BJ-23
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.86087	50.7	-	NPZI01	149	5128	4759	8/11/17	8/15/17	Contig	JCVI	SAMN07450616	GCA_002246595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/595/GCA_002246595.1_ASM224659v1	-	ECCTRSRTH03
Bacteroides fragilis	817	PRJNA244943	244943	FCB group	Bacteroidetes/Chlorobi group	5.50961	43.4	-	JMZY02	232	4867	4517	6/19/14	4/2/17	Contig	Odense University Hospital	SAMN02730070	GCA_000710375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/375/GCA_000710375.2_DCMOUH0017B2.0	-	DCMOUH0017B
Lactobacillus reuteri	1598	PRJNA248653	248653	Terrabacteria group	Firmicutes	1.94954	38.5	-	JOSW02	17	1881	1622	6/26/14	8/18/15	Contig	University of Alberta	SAMN02869563	GCA_000712565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/565/GCA_000712565.2_ASM71256v2	-	TMW1.656
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.73615	67.1	-	MURZ01	198	7492	6961	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001865	GCA_001992005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/005/GCA_001992005.1_ASM199200v1	-	VC7689
Burkholderia pseudomallei 1710a	320371	PRJNA13950	13950	Proteobacteria	Betaproteobacteria	7.33608	67.9398	chromosome I:NZ_CM000832.1/CM000832.1; chromosome II:NZ_CM000833.1/CM000833.1	AAHS03	40	7530	6961	6/9/05	5/18/17	Chromosome	TIGR	SAMN02435894	GCA_000193455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/455/GCA_000193455.1_ASM19345v1	-	1710a
Chlamydia trachomatis L2b/Ams5	1071782	PRJEA71125	71125	PVC group	Chlamydiae	1.04635	41.2634	chromosome:NC_020936.1/HE601965.1; plasmid pAms5:NC_020950.1/HE603217.1	-	2	973	902	3/13/12	3/23/17	Chromosome	Sanger Institute	SAMEA2272496	GCA_000319085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/085/GCA_000319085.1_ASM31908v1	22406642	L2b/Ams5
Bacillus thuringiensis serovar monterrey	180882	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.64756	34.7	-	NFCK01	91	7175	6664	5/17/17	6/15/17	Contig	Huazhong Agricultural University	SAMN05934495	GCA_002146495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/495/GCA_002146495.1_ASM214649v1	-	BGSC 4AJ1
Vibrio cholerae HC-41B1	1051362	PRJNA68605	68605	Proteobacteria	Gammaproteobacteria	3.8834	47.7	-	AJRP01	121	3702	3483	10/10/12	3/27/17	Scaffold	Institute for Genome Sciences	SAMN02435824	GCA_000304955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/955/GCA_000304955.2_ASM30495v2	-	HC-41B1
Clostridioides difficile CD68	1151273	PRJNA85719	85719	Terrabacteria group	Firmicutes	3.97598	28.2	-	AVHD01	141	3703	3476	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766623	GCA_000449165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/165/GCA_000449165.2_ASM44916v2	-	CD68
Francisella tularensis	263	PRJNA253675	253675	Proteobacteria	Gammaproteobacteria	1.85603	32.3	-	JPMU01	99	2011	1569	2/25/16	4/5/17	Contig	Swedish Defence Research Agency	SAMN02886898	GCA_001574885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/885/GCA_001574885.1_ASM157488v1	-	FDC203
Brucella abortus 89-0363	1328348	PRJNA200931	200931	Proteobacteria	Alphaproteobacteria	3.28368	57.2	-	ATGX01	4	3388	3163	6/21/13	3/24/17	Scaffold	Broad Institute	SAMN02092511	GCA_000413975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/975/GCA_000413975.1_Bruc_abor_biovar_1_89-0363_V1	-	89-0363
Xanthomonas citri subsp. citri	611301	PRJEB7199	265977	Proteobacteria	Gammaproteobacteria	5.15126	64.7	-	CDAO01	1189	5065	4104	11/4/14	4/3/17	Contig	CIRAD	SAMEA2827231	GCA_000825505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/505/GCA_000825505.1_XAC3610	-	NCPPB 3610
Xanthomonas oryzae pv. oryzae	64187	PRJNA269420	269420	Proteobacteria	Gammaproteobacteria	4.29009	63.9	-	JXEQ01	405	4291	3446	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252542	GCA_001928355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/355/GCA_001928355.1_ASM192835v1	-	DXO-091
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.90774	37.9	-	MLMW01	292	1964	1724	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297062	GCA_001867965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/965/GCA_001867965.1_ASM186796v1	27118061	AWRIB394
Vibrio parahaemolyticus Peru-466	563771	PRJNA33621	33621	Proteobacteria	Gammaproteobacteria	5.03749	45.4	-	ACFM01	149	4832	4584	2/3/09	5/19/17	Contig	J Craig Venter Institute	SAMN02436220	GCA_000182345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/182/345/GCA_000182345.1_ASM18234v1	21645368	Peru-466
Bacillus subtilis GB03	1423687	PRJNA227787	227787	Terrabacteria group	Firmicutes	3.84955	46.6	-	AYTJ01	37	3793	3652	12/15/13	3/24/17	Contig	KRIBB	SAMN02413381	GCA_000508125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/125/GCA_000508125.1_GB03_01	25359911	GB03
Staphylococcus lugdunensis	28035	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.61383	33.9	chromosome:NZ_CP014023.1/CP014023.1	-	1	2515	2347	2/11/16	4/4/17	Complete Genome	US Food and Drug Administration 	SAMN03996287	GCA_001558815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/815/GCA_001558815.1_ASM155881v1	-	FDAARGOS_143
Clostridium botulinum	1491	PRJNA239370	239370	Terrabacteria group	Firmicutes	3.73178	28.8	-	JFGA01	1046	3713	2967	7/18/14	3/24/17	Contig	Centers for Disease Control and Prevention	SAMN02664956	GCA_000730955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/955/GCA_000730955.1_ASM73095v1	25031122	CDC67190
Enterococcus faecalis ERV93	1134800	PRJNA81989	81989	Terrabacteria group	Firmicutes	3.09818	37.3	-	ALZY01	103	3203	3045	8/27/12	3/27/17	Scaffold	Washington University	SAMN02299476	GCA_000294305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/305/GCA_000294305.2_ASM29430v2	-	ERV93
Streptococcus mutans M230	857100	PRJNA49865	49865	Terrabacteria group	Firmicutes	1.91745	36.9	-	AHRH01	139	1893	1803	2/11/13	3/23/17	Contig	Cornell University	SAMN02428927	GCA_000339135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/135/GCA_000339135.1_ASM33913v1	23228887	M230
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.13469	52.5	-	CQKD01	81	2508	2184	3/23/15	4/11/17	Contig	SC	SAMEA1677394	GCA_001094285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/285/GCA_001094285.1_8727_5_50	-	GCGS200
Enterococcus faecium 515	1134813	PRJNA82015	82015	Terrabacteria group	Firmicutes	2.87496	37.6	-	AMBE01	231	2931	2797	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299488	GCA_000295595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/595/GCA_000295595.2_ASM29559v2	-	515
Stenotrophomonas maltophilia	40324	PRJNA278502	278502	Proteobacteria	Gammaproteobacteria	4.40536	66.7	-	LATR01	80	4056	3722	4/14/15	3/26/17	Scaffold	Institut Pasteur de Paris	SAMN03456145	GCA_000972335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/335/GCA_000972335.1_ASM97233v1	26472823	BR12
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15928	41.1	-	CWAH01	73	2096	1930	6/24/15	3/26/17	Contig	SC	SAMEA1032847	GCA_001176605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/605/GCA_001176605.1_6903_3_34	-	EQUI0083
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.42489	40.2	-	LQFA01	39	2330	2219	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366548	GCA_001930605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/605/GCA_001930605.1_ASM193060v1	-	2887PM
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.8938	46.6	-	JTIS01	344	2996	2545	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196628	GCA_001657155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/155/GCA_001657155.1_ASM165715v1	-	Lrh12
Brucella melitensis bv. 1 str. 16M	224914	PRJNA82685	82685	Proteobacteria	Alphaproteobacteria	3.28308	57.2	-	AHWC01	75	3337	3129	2/28/12	3/30/17	Contig	"Chinese PLA Institute for Disease Control & Prevention, Academy of Military Medical Sciences"	SAMN02469571	GCA_000250795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/795/GCA_000250795.2_ASM25079v2	22965104	16M
Mycoplasma wenyonii str. Massachusetts	1197325	PRJNA168067	168067	Terrabacteria group	Tenericutes	0.650228	33.9	chromosome:NC_018149.1/CP003703.1	-	1	720	675	7/16/12	4/17/17	Complete Genome	Purdue University	SAMN02603734	GCA_000277795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/795/GCA_000277795.1_ASM27779v1	22965086	Massachusetts
Corynebacterium diphtheriae	1717	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.48047	53.6	-	MSIO01	30	2448	2252	6/20/17	6/22/17	Contig	Northumbria University	SAMN06174246	GCA_002201165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/165/GCA_002201165.1_ASM220116v1	-	1050
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.75154	47.1	-	CQEI01	38	4478	4300	3/23/15	3/26/17	Scaffold	SC	SAMEA980198	GCA_001102905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/905/GCA_001102905.1_4976_7_9	-	YE53/30444
Serratia marcescens	615	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.42782	59.8	-	NPGG01	73	5219	4992	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07345019	GCA_002264175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/175/GCA_002264175.1_ASM226417v1	-	SE4145
Lactobacillus plantarum	1590	PRJNA314083	314083	Terrabacteria group	Firmicutes	3.41285	44.2	-	LUWR01	59	3350	3163	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04528803	GCA_001633405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/405/GCA_001633405.1_ASM163340v1	-	Nizo2535
Campylobacter coli CVM N29716	1242865	PRJNA177432	177432	Proteobacteria	delta/epsilon subdivisions	1.71729	31.4	-	ANMS01	23	1768	1650	9/6/13	3/15/17	Contig	FDA/CVM/OR	SAMN02742053	GCA_000464875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/875/GCA_000464875.1_ASM46487v1	23959310	CVM N29716
Burkholderia sp. AU31652	2015354	PRJNA391085	391085	Proteobacteria	Betaproteobacteria	8.24011	66.8	-	NKFG01	24	7525	7230	7/20/17	7/22/17	Contig	University of Michigan	SAMN07257389	GCA_002223155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/155/GCA_002223155.1_ASM222315v1	-	AU31652
Propionibacterium acnes FZ1/2/0	1276649	PRJNA184922	184922	Terrabacteria group	Actinobacteria	2.47753	60	-	AOGR01	25	2502	2345	3/1/13	4/1/17	Contig	BAYGEN	SAMN02469317	GCA_000342585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/585/GCA_000342585.1_PropiAcnFZ1_2_0_1.0	-	FZ1/2/0
Staphylococcus haemolyticus	1283	PRJNA293144	293144	Terrabacteria group	Firmicutes	2.47248	32.7	-	LILF01	83	2422	2305	10/26/15	3/27/17	Contig	CSIR-Institute of Microbial Technology	SAMN03997514	GCA_001412465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/465/GCA_001412465.1_ASM141246v1	-	MTCC 3383
Enterobacter cloacae	550	PRJNA287094	287094	Proteobacteria	Gammaproteobacteria	4.81046	55.3	-	LFHB01	48	4618	4425	7/24/15	3/26/17	Contig	University of Malaya	SAMN03776151	GCA_001187305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/305/GCA_001187305.1_ASM118730v1	-	LB3
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.15975	54.9	-	FKZN01	69	6008	5739	5/19/16	2/21/17	Scaffold	SC	SAMEA2273686	GCA_900084025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/025/GCA_900084025.1_11983_8_41	-	2880STDY5682610
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.52187	56.7	-	NCWJ01	175	4437	4182	4/24/17	4/26/17	Contig	FDA/CFSAN	SAMN06712276	GCA_002107895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/895/GCA_002107895.1_ASM210789v1	-	MOD1-cr10
Mycobacterium abscessus MAB_110811_1470	1335416	PRJNA203571	203571	Terrabacteria group	Actinobacteria	4.84078	64.2	-	JAOU01	16	4808	4599	1/27/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02641619	GCA_000523955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/955/GCA_000523955.1_ASM52395v1	-	MAB_110811_1470
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.62288	67.2	-	LPAB01	120	6895	6553	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449337	GCA_001527845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/845/GCA_001527845.1_ASM152784v1	-	MSMB1568WGS
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	3.90816	38.8	-	MDHT01	162	3811	3634	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022854	GCA_001706695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/695/GCA_001706695.1_ASM170669v1	-	UKK-0245
Citrobacter freundii	546	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.75525	51.8	-	NGRF01	2	4670	4397	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521901	GCA_002151815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/815/GCA_002151815.1_ASM215181v1	-	MGH152
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.12299	54.9	-	JZYW01	65	5011	4777	3/19/15	3/25/17	Contig	JCVI	SAMN03283658	GCA_000958095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/095/GCA_000958095.1_ASM95809v1	-	35703
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.06834	55.1	-	LRIT01	57	5012	4770	1/22/16	4/6/17	Contig	JCVI	SAMN04431019	GCA_001525265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/265/GCA_001525265.1_ASM152526v1	-	SMART_1249
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98361	64.1	-	FSFX01	75	4948	4791	12/14/16	3/21/17	Scaffold	SC	SAMEA2069135	GCA_900135035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/035/GCA_900135035.1_10208_3_7	-	432
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.32377	66.9	-	LPIS01	79	7719	7377	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449570	GCA_001532525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/525/GCA_001532525.1_ASM153252v1	-	MSMB2164WGS
Pseudomonas sp. HMSC067F09	1739343	PRJNA299993	299993	Proteobacteria	Gammaproteobacteria	6.28777	66.5	-	LTES01	115	6005	5799	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477652	GCA_001812145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/145/GCA_001812145.1_ASM181214v1	-	HMSC067F09
Streptomyces sp. NRRL S-15	1463886	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.75676	69.3	-	JOGS01	327	7215	5634	7/1/14	3/11/17	Scaffold	University of Illinois	SAMN02645461	GCA_000722185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/185/GCA_000722185.1_ASM72218v1	-	NRRL S-15
Bacillus sp. JCM 19047	1460641	PRJDB1619	238523	Terrabacteria group	Firmicutes	4.04721	40	-	BAWC01	125	4450	3377	2/18/14	4/9/17	Contig	"Microbe Division/JCM, RIKEN BioResource Center"	SAMD00006053	GCA_000576365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/365/GCA_000576365.1_ASM57636v1	24652985	JCM 19047
Acinetobacter sp. 907131	1310670	PRJNA194746	194746	Proteobacteria	Gammaproteobacteria	3.88885	38.8	-	JEXS01	47	3796	3586	2/25/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02385025	GCA_000582195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/195/GCA_000582195.1_ASM58219v1	-	907131
Sphingomonas sp. Sph1(2015)	1628084	PRJNA355571	355571	Proteobacteria	Alphaproteobacteria	4.06127	66.3	-	MQUI01	145	3734	3560	1/25/17	7/21/17	Contig	Wageningen University	SAMN06077194	GCA_001970915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/970/915/GCA_001970915.1_ASM197091v1	28619801	sph1(2015)
Clostridium sp. CAG:352	1262798	PRJEB845	206940	Terrabacteria group	Firmicutes	2.25637	36.8	-	CBFG01	67	2140	2097	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138480	GCA_000431855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/855/GCA_000431855.1_MGS352	-	-
Rhodococcus sp. 05-2255-3C	2022483	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.7252	64.7	-	NOZB01	63	5469	5296	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376353	GCA_002258515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/515/GCA_002258515.1_ASM225851v1	-	05-2255-3C
Enterobacter cloacae complex sp. GN02468	1870945	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.94642	56.2	-	LEDT02	63	4914	4680	6/9/15	4/11/17	Contig	JCVI	SAMN03732710	GCA_001022525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/525/GCA_001022525.2_SAMN03732710_Assembly	-	GN02468
Staphylococcus sp. HMSC072B07	1739533	PRJNA300184	300184	Terrabacteria group	Firmicutes	2.6992	35.8	-	LTSU01	75	2599	2476	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480448	GCA_001815505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/505/GCA_001815505.1_ASM181550v1	-	HMSC072B07
Corynebacterium sp. HMSC056F09	1739548	PRJNA300199	300199	Terrabacteria group	Actinobacteria	2.75883	61.1	-	LTSH01	99	2592	2443	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480463	GCA_001815785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/785/GCA_001815785.1_ASM181578v1	-	HMSC056F09
Arthrobacter sp. P2b	1938741	PRJEB19759	377512	Terrabacteria group	Actinobacteria	4.89098	65.2	-	FVZL01	47	4457	4294	3/11/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06272721	GCA_900168295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/295/GCA_900168295.1_IMG-taxon_2710724208_annotated_assembly	-	P2b
Streptococcus sp. HMSC064D12	1715176	PRJNA296304	296304	Terrabacteria group	Firmicutes	2.11123	39.8	-	LTPP01	71	1996	1867	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498650	GCA_001837205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/205/GCA_001837205.1_ASM183720v1	-	HMSC064D12
Mycobacterium sp. 852002-40037_SCH5390672	1834089	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.3839	66.4	-	LZTA01	141	5094	4814	6/17/16	4/12/17	Contig	JCVI	SAMN04696143	GCA_001665875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/875/GCA_001665875.1_ASM166587v1	-	852002-40037_SCH5390672
Prevotella sp. UBA746	1947217	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.0215	45.1	-	DBKQ01	121	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452631	GCA_002298545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/545/GCA_002298545.1_ASM229854v1	28894102	-
Paenibacillus sp. 7523-1	2022550	PRJNA395369	395369	Terrabacteria group	Firmicutes	6.581	47	-	NPBR01	56	5867	5733	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372692	GCA_002276415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/415/GCA_002276415.1_assembly-7523-1_v1	-	7523-1
uncultured Ruminococcus sp.	165186	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.63592	37.5	-	FMGX01	11	2503	2455	8/16/16	8/16/16	Scaffold	SC	SAMEA3545432	GCA_900066995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/995/GCA_900066995.1_14207_7_92	-	-
Prochlorococcus sp. scB243_497I20	1471484	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.0208	31.6	-	JFMI01	136	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671355	GCA_000634935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/935/GCA_000634935.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. P0103	1895602	PRJNA341020	341020	Proteobacteria	delta/epsilon subdivisions	1.57642	33.5	-	MJKG01	21	1607	1531	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687040	GCA_002139545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/545/GCA_002139545.1_ASM213954v1	28854596	P0103
Rhizobium sp. Leaf391	1736360	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	6.56067	60	-	LMQG01	42	6286	6033	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151750	GCA_001424505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/505/GCA_001424505.1_Leaf391	26633631	Leaf391
Mesorhizobium sp. WSM4308	2029409	PRJNA399611	399611	Proteobacteria	Alphaproteobacteria	7.36119	62.8	-	NSFW01	49	7208	6807	9/12/17	9/14/17	Contig	Curtin University	SAMN07540848	GCA_002294905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/905/GCA_002294905.1_ASM229490v1	-	WSM4308
Microbacterium sp. 70-38	1895786	PRJNA279279	279279	Terrabacteria group	Actinobacteria	2.92855	70.1	-	MKSA01	598	3026	2517	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660517	GCA_001897105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/105/GCA_001897105.1_ASM189710v1	-	-
Ignavibacterium album JCM 16511	945713	PRJNA61811	61811	FCB group	Bacteroidetes/Chlorobi group	3.659	33.9	chromosome:NC_017464.1/CP003418.1	-	1	3177	3107	4/10/12	4/17/17	Complete Genome	The Pennsylvania State University	SAMN02603949	GCA_000258405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/405/GCA_000258405.1_ASM25840v1	22661972	JCM 16511
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.79865	57	-	FXRP01	105	5872	5494	4/28/17	5/6/17	Scaffold	SC	SAMEA2609529	GCA_900181945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/945/GCA_900181945.1_14936_2_51	-	3189STDY5864904
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79635	32.3	-	FQLO01	14	2799	2624	11/24/16	4/5/17	Scaffold	SC	SAMEA3449119	GCA_900126885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/885/GCA_900126885.1_17175_3_63	-	3688STDY6125117
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79235	32.3	-	FQLZ01	14	2790	2620	11/23/16	4/5/17	Scaffold	SC	SAMEA3449127	GCA_900126935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/935/GCA_900126935.1_17175_3_71	-	3688STDY6125125
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.65497	57.3	-	FXRQ01	277	5650	5293	4/28/17	5/6/17	Scaffold	SC	SAMEA2609531	GCA_900181955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/955/GCA_900181955.1_14936_2_52	-	3189STDY5864905
Thermodesulfobium narugense DSM 14796	747365	PRJNA46673	46673	Terrabacteria group	Firmicutes	1.89887	33.9	chromosome:NC_015499.1/CP002690.1	-	1	1891	1825	5/5/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713612	GCA_000212395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/212/395/GCA_000212395.1_ASM21239v1	-	DSM 14796
Microbacterium sp. 71-23	1895787	PRJNA279279	279279	Terrabacteria group	Actinobacteria	3.00821	70.5	-	MKSL01	55	2885	2745	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660528	GCA_001897265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/265/GCA_001897265.1_ASM189726v1	-	-
Mesorhizobium sp. WSM3879	2029406	PRJNA399611	399611	Proteobacteria	Alphaproteobacteria	6.1154	63.3	-	NSFZ01	38	5973	5669	9/12/17	9/14/17	Contig	Curtin University	SAMN07540845	GCA_002294915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/915/GCA_002294915.1_ASM229491v1	-	WSM3879
Rhizobium sp. Root1204	1736428	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	6.58377	59.2	-	LMCZ01	44	6384	6110	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155697	GCA_001424965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/424/965/GCA_001424965.1_Root1204	26633631	Root1204
Campylobacter sp. P0106	1895603	PRJNA341021	341021	Proteobacteria	delta/epsilon subdivisions	1.61416	33.5	-	MJKH01	25	1680	1594	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687041	GCA_002139575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/575/GCA_002139575.1_ASM213957v1	28854596	P0106
Prochlorococcus sp. scB243_497N18	1471486	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.675744	31.8	-	JFMK01	159	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671357	GCA_000634955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/955/GCA_000634955.1_De_novo_assembly_of_single-cell_genomes	24763590	-
uncultured Ruminococcus sp.	165186	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.96031	42.6	-	FMGZ01	74	2717	2669	8/16/16	8/16/16	Scaffold	SC	SAMEA3545434	GCA_900067005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/067/005/GCA_900067005.1_14207_7_94	-	-
Paenibacillus sp. GM2	1622070	PRJEB8941	279374	Terrabacteria group	Firmicutes	5.84663	47.8	-	CTEK01	46	5147	4915	3/25/15	4/12/17	Contig	URMITE	SAMEA3312816	GCA_900069005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/069/005/GCA_900069005.1_Paenibacillus_numidis	-	GM2
Prevotella sp. UBA745	1947216	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.43206	56.1	-	DBKR01	132	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452632	GCA_002298585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/585/GCA_002298585.1_ASM229858v1	28894102	-
Mycobacterium sp. E2699	1834137	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.73351	68.9	-	LZJH01	149	5373	5161	6/17/16	4/13/17	Contig	JCVI	SAMN04634234	GCA_001666745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/745/GCA_001666745.1_ASM166674v1	-	E2699
Streptococcus sp. HMSC064H02	1715115	PRJNA296243	296243	Terrabacteria group	Firmicutes	2.12712	35.3	-	LTPM01	39	2176	2080	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498617	GCA_001837275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/275/GCA_001837275.1_ASM183727v1	-	HMSC064H02
Croceibacter atlanticus HTCC2559	216432	PRJNA13570	13570	FCB group	Bacteroidetes/Chlorobi group	2.95296	33.9	chromosome:NC_014230.1/CP002046.1	-	1	2703	2646	6/9/10	4/17/17	Complete Genome	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02603922	GCA_000196315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/315/GCA_000196315.1_ASM19631v1	20639333	HTCC2559
Corynebacterium sp. HMSC04H06	1581050	PRJNA269804	269804	Terrabacteria group	Actinobacteria	2.3806	65.4	-	LWPR01	73	2202	2060	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436206	GCA_001815935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/935/GCA_001815935.1_ASM181593v1	-	HMSC04H06
Staphylococcus sp. HMSC070D05	1739538	PRJNA300189	300189	Terrabacteria group	Firmicutes	2.22652	31.4	-	LTSQ01	75	2188	2097	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480454	GCA_001815595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/595/GCA_001815595.1_ASM181559v1	-	HMSC070D05
Enterobacter cloacae complex sp. GN02548	1659713	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.91127	55.7	-	LEDQ01	32	4789	4599	6/9/15	4/10/17	Contig	JCVI	SAMN03732713	GCA_001022595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/595/GCA_001022595.1_ASM102259v1	-	GN02548
Rhodococcus sp. 05-2255-3B1	2022482	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.72682	64.7	-	NOZC01	46	5474	5314	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376352	GCA_002258545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/545/GCA_002258545.1_ASM225854v1	-	05-2255-3B1
Clostridium sp. CAG:81	1262842	PRJEB1013	206852	Terrabacteria group	Firmicutes	2.83214	49.1	-	CAXP01	64	2519	2480	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138487	GCA_000431995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/431/995/GCA_000431995.1_MGS81	-	-
Sphingomonas sp. CDS-1	2004404	PRJNA387507	387507	Proteobacteria	Alphaproteobacteria	5.36868	62.7	-	NHRH01	409	5179	4854	6/2/17	6/5/17	Contig	NJAU	SAMN07156148	GCA_002165615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/615/GCA_002165615.1_ASM216561v1	-	CDS-1
Acinetobacter sp. 1239920	1310680	PRJNA194756	194756	Proteobacteria	Gammaproteobacteria	3.29481	41.6	-	JEXZ01	52	3171	2950	2/25/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02385031	GCA_000582235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/235/GCA_000582235.1_ASM58223v1	-	1239920
Bacillus sp. TS-2	1450694	PRJDB1588	240169	Terrabacteria group	Firmicutes	4.36065	35.6	-	BAWL01	58	4108	3928	3/7/14	4/9/17	Contig	Toyo University	SAMD00000008	GCA_000586495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/495/GCA_000586495.1_ASM58649v1	24855304	TS-2
Streptomyces sp. NRRL F-6676	1463878	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.121	72.3	-	JOHS01	167	7153	6740	7/15/14	3/11/17	Scaffold	University of Illinois	SAMN02645487	GCA_000725625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/625/GCA_000725625.1_Doro.v1.0	-	NRRL F-6676
Pseudomonas sp. HMSC076A12	1739344	PRJNA299994	299994	Proteobacteria	Gammaproteobacteria	6.00337	66.3	-	LTER01	79	5792	5551	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04477651	GCA_001812165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/165/GCA_001812165.1_ASM181216v1	-	HMSC076A12
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.32673	66.9	-	LPIT01	80	7728	7379	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449571	GCA_001532555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/555/GCA_001532555.1_ASM153255v1	-	MSMB2165WGS
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18775	64.1	-	FVLO01	33	5204	5007	3/10/17	3/18/17	Scaffold	SC	SAMEA2259679	GCA_900135885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/885/GCA_900135885.1_11893_6_37	-	874
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.06891	55.1	-	LRIU01	54	5015	4770	1/22/16	4/6/17	Contig	JCVI	SAMN04431018	GCA_001525505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/505/GCA_001525505.1_ASM152550v1	-	SMART_1248
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.90411	55	-	JZYO01	115	4939	4683	3/19/15	3/25/17	Contig	JCVI	SAMN03283646	GCA_000958145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/145/GCA_000958145.1_ASM95814v1	-	39366
Citrobacter freundii	546	PRJNA383978	383978	Proteobacteria	Gammaproteobacteria	5.85808	51.6	-	NEFA01	181	6115	5657	8/15/17	8/17/17	Scaffold	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN06820765	GCA_002252025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/025/GCA_002252025.1_ASM225202v1	-	C191
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	3.96069	38.8	-	MDIV01	156	3850	3676	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022845	GCA_001706715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/715/GCA_001706715.1_ASM170671v1	-	St-12828-92
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.03679	67	-	LPAD01	119	7456	7031	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449339	GCA_001527865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/865/GCA_001527865.1_ASM152786v1	-	MSMB1585WGS
Mycobacterium abscessus subsp. bolletii 103	1299325	PRJNA191789	191789	Terrabacteria group	Actinobacteria	5.31425	64.1	-	JAOK01	14	5392	5236	1/27/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02641605	GCA_000524075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/075/GCA_000524075.1_ASM52407v1	-	103
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.46652	56.9	-	NCWN01	152	4318	4074	4/24/17	4/26/17	Contig	FDA/CFSAN	SAMN06712284	GCA_002107915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/915/GCA_002107915.1_ASM210791v1	-	MOD1-cr5
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.17757	55.8	-	FKZF01	67	6024	5729	5/19/16	2/21/17	Scaffold	SC	SAMEA2273760	GCA_900084035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/035/GCA_900084035.1_12082_5_21	-	2880STDY5682685
Enterobacter cloacae	550	PRJNA287091	287091	Proteobacteria	Gammaproteobacteria	5.0002	54.9	-	LFLH01	58	4865	4691	7/31/15	3/26/17	Contig	University of Malaya	SAMN03776124	GCA_001190095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/190/095/GCA_001190095.1_ASM119009v1	-	LB2
Staphylococcus haemolyticus	1283	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.69551	32.8	-	LOSE01	2	2645	2450	12/21/15	3/27/17	Contig	US Food and Drug Administration 	SAMN03996273	GCA_001471515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/515/GCA_001471515.1_ASM147151v1	-	FDAARGOS_130
Propionibacterium acnes DSM 1897	1122995	PRJNA169817	169817	Terrabacteria group	Actinobacteria	2.47899	60.1	-	AWZZ01	10	2499	2358	9/30/13	4/2/17	Contig	DOE Joint Genome Institute	SAMN02440711	GCA_000472405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/405/GCA_000472405.1_ASM47240v1	-	DSM 1897
Burkholderia sp. AU31280	2015353	PRJNA391085	391085	Proteobacteria	Betaproteobacteria	7.71058	66.8	-	NKFF01	13	7106	6785	7/20/17	7/22/17	Contig	University of Michigan	SAMN07257388	GCA_002223185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/185/GCA_002223185.1_ASM222318v1	-	AU31280
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70095	31.4	-	CUHU01	26	1765	1660	3/31/15	3/18/17	Contig	SC	SAMEA1010430	GCA_001223685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/685/GCA_001223685.1_7038_3_14	-	OXC6263
Lactobacillus plantarum	1590	PRJNA314087	314087	Terrabacteria group	Firmicutes	3.34653	44.3	-	LUWT01	49	3263	3090	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04528807	GCA_001633415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/415/GCA_001633415.1_ASM163341v1	-	Nizo2741
Serratia marcescens	615	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.41286	59.8	-	NPGH01	57	5195	4986	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07345018	GCA_002264285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/285/GCA_002264285.1_ASM226428v1	-	SE3605
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.38497	47.2	-	CPZL01	82	4063	3830	3/23/15	3/26/17	Scaffold	SC	SAMEA980187	GCA_001103745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/745/GCA_001103745.1_4976_7_7	-	SZ5108/01
Corynebacterium diphtheriae	1717	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.42195	53.5	-	MSIK01	31	2338	2166	6/20/17	6/22/17	Contig	Northumbria University	SAMN06174242	GCA_002201175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/175/GCA_002201175.1_ASM220117v1	-	1006
Staphylococcus lugdunensis HKU09-01	698737	PRJNA42395	42395	Terrabacteria group	Firmicutes	2.65837	33.9	chromosome:NC_013893.1/CP001837.1	-	1	2567	2425	2/19/10	3/30/17	Complete Genome	The University of Hong Kong	SAMN02603957	GCA_000025085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/085/GCA_000025085.1_ASM2508v1	20047907	HKU09-01
Brucella melitensis 16M1W	1143190	PRJNA82687	82687	Proteobacteria	Alphaproteobacteria	3.28337	57.2	-	AHWD01	83	3339	3130	2/28/12	3/30/17	Contig	"Chinese PLA Institute for Disease Control & Prevention, Academy of Military Medical Sciences"	SAMN02469567	GCA_000250815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/815/GCA_000250815.2_ASM25081v2	22965104	16M1W
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.88243	46.7	-	JTIU01	86	2927	2740	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196618	GCA_001657165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/165/GCA_001657165.1_ASM165716v1	-	Lrh10
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.41617	40.2	-	LQFJ01	33	2321	2212	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366557	GCA_001930705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/705/GCA_001930705.1_ASM193070v1	-	3022PM
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12522	41.2	-	CWDC01	79	2046	1872	6/23/15	3/26/17	Contig	SC	SAMEA1032848	GCA_001176625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/625/GCA_001176625.1_6903_6_24	-	EQUI0169
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.39283	66.7	-	JWAT01	108	4018	3897	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197119	GCA_001068765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/765/GCA_001068765.1_ASM106876v1	26230489	1162_SMAL
Enterococcus faecium 514	1134812	PRJNA82011	82011	Terrabacteria group	Firmicutes	2.9317	37.7	-	AMBF01	246	3000	2816	9/4/12	3/27/17	Scaffold	Washington University	SAMN02299487	GCA_000295615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/615/GCA_000295615.2_ASM29561v2	-	514
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.14819	52.4	-	CQHP01	66	2536	2197	3/22/15	4/11/17	Contig	SC	SAMEA1677418	GCA_001094485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/485/GCA_001094485.1_8727_5_71	-	GCGS221
Streptococcus mutans 15JP3	857152	PRJNA49759	49759	Terrabacteria group	Firmicutes	1.93297	36.9	-	AHRJ01	87	1937	1858	2/11/13	3/23/17	Contig	Cornell University	SAMN02429081	GCA_000339155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/155/GCA_000339155.1_ASM33915v1	23228887	15JP3
Enterococcus faecalis R508	1134801	PRJNA81991	81991	Terrabacteria group	Firmicutes	2.79303	37.4	-	ALZZ01	66	2780	2668	8/27/12	3/27/17	Scaffold	Washington University	SAMN02299477	GCA_000294325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/325/GCA_000294325.2_ASM29432v2	-	R508
Clostridium botulinum	1491	PRJNA239370	239370	Terrabacteria group	Firmicutes	3.8933	28.2	-	JFFZ01	684	3808	3402	7/18/14	3/24/17	Contig	Centers for Disease Control and Prevention	SAMN02664957	GCA_000730965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/965/GCA_000730965.1_ASM73096v1	25031122	CDC42961
Staphylococcus lugdunensis	28035	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.57163	33.8	chromosome:CP023539.1	-	1	2479	2351	10/2/17	10/2/17	Complete Genome	US Food and Drug Administration 	SAMN07312421	GCA_002407165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/407/165/GCA_002407165.1_ASM240716v1	-	FDAARGOS_377
Bacillus subtilis QH-1	1437006	PRJNA231890	231890	Terrabacteria group	Firmicutes	4.03404	43.7	-	AZQS01	11	4178	4053	2/27/14	3/24/17	Contig	China University of Geosciences	SAMN02951917	GCA_000582885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/885/GCA_000582885.1_QH-1_V1.0	24675852	QH-1
Vibrio parahaemolyticus AQ4037	563772	PRJNA33623	33623	Proteobacteria	Gammaproteobacteria	4.9398	45.4	-	ACFN01	164	4709	4378	2/3/09	5/19/17	Contig	J Craig Venter Institute	SAMN02436312	GCA_000182365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/182/365/GCA_000182365.1_ASM18236v1	21645368	AQ4037
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.95614	37.9	-	MLMY01	300	2033	1785	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297064	GCA_001867975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/975/GCA_001867975.1_ASM186797v1	27118061	AWRIB401
Xanthomonas oryzae pv. oryzae	64187	PRJNA269423	269423	Proteobacteria	Gammaproteobacteria	4.2537	63.9	-	JXET01	413	4221	3415	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252520	GCA_001928365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/365/GCA_001928365.1_ASM192836v1	-	DXO-129
Xanthomonas citri subsp. citri	611301	PRJEB7200	265978	Proteobacteria	Gammaproteobacteria	5.20665	64.7	-	CDMQ01	1233	5096	4109	1/13/15	4/2/17	Contig	CIRAD	SAMEA2827230	GCA_000825525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/525/GCA_000825525.1_XAC439	-	JK143-9
Brucella abortus 87-2211	1328347	PRJNA200930	200930	Proteobacteria	Alphaproteobacteria	3.28706	57.2	-	ATGY01	4	3385	3169	6/21/13	3/24/17	Scaffold	Broad Institute	SAMN02092510	GCA_000413995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/995/GCA_000413995.1_Bruc_abor_biovar_1_87-2211_V1	-	87-2211
Francisella tularensis	263	PRJNA317365	317365	Proteobacteria	Gammaproteobacteria	1.76843	32.3	-	LVYJ01	117	1816	1506	4/6/16	4/5/17	Contig	RARI	SAMN04606331	GCA_001611815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/815/GCA_001611815.1_ASM161181v1	-	15NIIEG
Clostridioides difficile CD69	1151274	PRJNA85721	85721	Terrabacteria group	Firmicutes	3.99107	28.7	-	AVHE01	59	3756	3464	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766624	GCA_000449185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/185/GCA_000449185.2_ASM44918v2	-	CD69
Vibrio cholerae HC-50A2	991968	PRJNA63943	63943	Proteobacteria	Gammaproteobacteria	4.0308	47.5	-	AJRQ01	338	3848	3582	10/10/12	3/23/17	Scaffold	Institute for Genome Sciences	SAMN00736140	GCA_000304995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/995/GCA_000304995.1_ASM30499v1	-	HC-50A2
Bacillus thuringiensis serovar coreanensis	180843	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.68432	35.1	-	NFCL01	45	6102	5709	5/17/17	6/16/17	Contig	Huazhong Agricultural University	SAMN05934497	GCA_002146505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/505/GCA_002146505.1_ASM214650v1	-	BGSC 4AL1
Chlamydia trachomatis L2b/Canada1	1075085	PRJEA71457	71457	PVC group	Chlamydiae	1.04604	41.2634	chromosome:NC_020935.1/HE601963.1; plasmid pL2bCan1:NC_020953.1/HE603223.1	-	2	973	887	3/13/12	3/23/17	Chromosome	Sanger Institute	SAMEA2272614	GCA_000319125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/125/GCA_000319125.1_ASM31912v1	22406642	L2b/Canada1
Burkholderia pseudomallei 1106b	357347	PRJNA16181	16181	Proteobacteria	Betaproteobacteria	7.21653	68.1867	chromosome I:NZ_CM000774.1/CM000774.1; chromosome II:NZ_CM000775.1/CM000775.1	AAMB02	84	7403	6897	11/17/05	5/18/17	Chromosome	TIGR	SAMN02435836	GCA_000193475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/475/GCA_000193475.1_ASM19347v1	-	1106b
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.02956	67	-	MURG01	165	7647	7172	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001843	GCA_001992035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/035/GCA_001992035.1_ASM199203v1	-	VC9670
Lactobacillus reuteri	1598	PRJNA326063	326063	Terrabacteria group	Firmicutes	1.91886	38.7	-	MAGB01	200	1969	1440	10/11/16	10/11/16	Contig	Agharkar Research Institute	SAMN05257121	GCA_001756765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/765/GCA_001756765.1_ASM175676v1	-	HI24
Bacteroides fragilis	817	PRJNA244944	244944	FCB group	Bacteroidetes/Chlorobi group	5.30038	43.3	-	JMZZ02	268	4683	4382	6/19/14	4/3/17	Contig	Odense University Hospital	SAMN02730071	GCA_000724665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/665/GCA_000724665.2_DCMOUH0018B2.0	-	DCMOUH0018B
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.97426	50.7	-	NQAG01	108	5166	4837	8/11/17	8/15/17	Contig	JCVI	SAMN07450765	GCA_002246755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/755/GCA_002246755.1_ASM224675v1	-	ECCTRPRTH01
Legionella pneumophila	446	PRJNA281034	281034	Proteobacteria	Gammaproteobacteria	3.64984	38.2	-	LAXU01	40	3340	3197	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03481690	GCA_001582245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/245/GCA_001582245.1_ASM158224v1	26888563	JX1
Pseudomonas syringae CC94	1357286	PRJNA211414	211414	Proteobacteria	Gammaproteobacteria	6.14986	59.3	-	AVEA02	566	5635	5223	8/20/13	3/24/17	Contig	University of Arizona	SAMN02471551	GCA_000452925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/925/GCA_000452925.2_CC94_092313_2.0	24459267	CC94
Streptococcus suis YS43	1214202	PRJNA171464	171464	Terrabacteria group	Firmicutes	2.0518	41.2	-	ALMQ01	67	2067	1940	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469546	GCA_000441275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/275/GCA_000441275.1_version1	-	YS43
Streptococcus agalactiae GB00904	1154945	PRJNA86563	86563	Terrabacteria group	Firmicutes	2.17401	35.7	-	ALUL01	38	2247	2105	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991429	GCA_000288375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/375/GCA_000288375.1_ASM28837v1	-	GB00904
Acinetobacter baumannii NIPH 24	1217646	PRJNA183334	183334	Proteobacteria	Gammaproteobacteria	3.89398	39.1	-	APOF01	12	3730	3567	4/16/13	3/15/17	Scaffold	Broad Institute	SAMN01087912	GCA_000367885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/885/GCA_000367885.1_Acin_baum_NIPH_24_V1	-	NIPH 24
Megamonas hypermegale	158847	PRJEB6403	251923	Terrabacteria group	Firmicutes	2.23034	33.8	chromosome 1:NZ_LT906446.1/LT906446.1	-	1	2146	2038	8/15/17	8/28/17	Complete Genome	SC	SAMEA4364220	GCA_900187035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/035/GCA_900187035.1_50279_G02	-	NCTC10570
Bifidobacterium longum subsp. suis	1695	PRJNA339033	339033	Terrabacteria group	Actinobacteria	2.60288	59.9	-	MOAE01	45	2276	2043	11/7/16	4/5/17	Scaffold	ETH Zurich	SAMN05578880	GCA_001870705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/705/GCA_001870705.1_ASM187070v1	27782805	BSM11-5
Shigella flexneri	623	PRJNA385907	385907	Proteobacteria	Gammaproteobacteria	4.65915	50.5	-	NGVY01	474	5343	4214	6/6/17	8/4/17	Contig	Christian Medical College	SAMN06920486	GCA_002174785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/785/GCA_002174785.1_ASM217478v1	-	FC1247
Bacillus anthracis	1392	PRJNA257008	257008	Terrabacteria group	Firmicutes	5.45826	35.1	-	LAKZ01	32	6115	5708	5/1/15	3/26/17	Contig	µFORGE	SAMN02999502	GCA_000986915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/986/915/GCA_000986915.1_BANT001-SEQ-3-ASM-1	-	A1039
Leptospira interrogans serovar Copenhageni str. Fiocruz LV4034	1291346	PRJNA189014	189014	Spirochaetes	Spirochaetia	4.61589	35	-	AOVC01	138	4139	3760	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920127	GCA_000343265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/265/GCA_000343265.1_CA_glsol159	-	Fiocruz LV4034
Streptococcus pyogenes ABC020009156	1439000	PRJNA233217	233217	Terrabacteria group	Firmicutes	1.8164	38.6	-	JJFZ01	8	1839	1696	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567566	GCA_000630125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/125/GCA_000630125.1_Stre_pyog_ABC020009156_V1	-	ABC020009156
Neisseria meningitidis Nm11003	1245028	PRJNA178251	178251	Proteobacteria	Betaproteobacteria	2.12743	51.5	-	ANBU01	80	2392	2052	1/28/13	3/15/17	Scaffold	BGI	SAMN02470977	GCA_000334175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/175/GCA_000334175.1_SOAPdenovo_v1.06	-	Nm11003
Helicobacter pylori	210	PRJDB4296	362565	Proteobacteria	delta/epsilon subdivisions	1.62315	38.7881	chromosome:AP017339.1; plasmid pHPF28:AP017340.1	-	2	1585	1553	1/18/17	1/18/17	Chromosome	"Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture"	SAMD00042472	GCA_002357335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/335/GCA_002357335.1_ASM235733v1	-	F28
Streptococcus pneumoniae SP195	453363	PRJNA20541	20541	Terrabacteria group	Firmicutes	2.19685	39.7	-	ABGE01	41	2439	2142	10/9/07	3/18/17	Contig	J. Craig Venter Institute	SAMN00000216	GCA_000171655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/655/GCA_000171655.1_ASM17165v1	-	SP195
Staphylococcus lugdunensis	28035	PRJNA338738	338738	Terrabacteria group	Firmicutes	2.58415	33.8	chromosome:NZ_CP017069.2/CP017069.2	-	1	2501	2358	8/14/17	9/20/17	Complete Genome	HKU	SAMN05591932	GCA_002250095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/095/GCA_002250095.2_ASM225009v2	27503649	Klug93G-4
Mycobacterium tuberculosis TRS12	1334058	PRJNA203170	203170	Terrabacteria group	Actinobacteria	4.41153	65.4	chromosome:NZ_CP009182.1/CP009182.1	-	1	4307	4081	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837632	GCA_001998175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/175/GCA_001998175.1_ASM199817v1	27261264	TRS12
Haemophilus influenzae	727	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	1.82203	37.9	-	LZMU01	19	1813	1681	7/5/16	3/28/17	Scaffold	TAILORED-Treatment project	SAMN05219228	GCA_001679365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/365/GCA_001679365.1_ASM167936v1	-	CCUG 54503
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.22181	69	-	BDND01	304	4986	4679	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076684	GCA_002089275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/275/GCA_002089275.1_ASM208927v1	28045086	HF-4
Lactococcus lactis subsp. cremoris	1359	PRJNA286840	286840	Terrabacteria group	Firmicutes	2.49846	35.4	-	LITC01	332	2555	2202	4/18/16	4/5/17	Contig	Radboudumc	SAMN03770941	GCA_001622315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/315/GCA_001622315.1_ASM162231v1	-	B40
Bacillus cereus VD078	1053227	PRJNA70421	70421	Terrabacteria group	Firmicutes	6.10852	35.2	-	AHEV01	11	6381	5938	8/15/12	6/15/17	Scaffold	Broad Institute	SAMN02596859	GCA_000290895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/895/GCA_000290895.1_Baci_cere_VD078_V1	-	VD078
Staphylococcus epidermidis	1282	PRJNA255947	255947	Terrabacteria group	Firmicutes	2.6899	31.9	-	JZUK01	53	2742	2555	3/31/15	3/26/17	Contig	Cork Institute of Technology	SAMN03396260	GCA_000966705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/705/GCA_000966705.1_ASM96670v1	25977439	NGS-ED-1107
Staphylococcus lugdunensis	28035	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.54025	33.8	chromosome:NZ_CP020406.1/CP020406.1	-	1	2414	2261	3/29/17	4/1/17	Complete Genome	US Food and Drug Administration 	SAMN04875559	GCA_002073395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/395/GCA_002073395.1_ASM207339v1	-	FDAARGOS_222
Pseudomonas fluorescens	294	PRJNA262941	262941	Proteobacteria	Gammaproteobacteria	6.13111	60.8	-	JRXV01	23	5626	5450	12/16/14	4/2/17	Scaffold	"University of Michigan, Ann Arbor"	SAMN03092887	GCA_000801835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/835/GCA_000801835.1_PfAU10973	25635025	AU10973
Yersinia pestis subsp. microtus bv. Altaica	385967	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.65013	47.6	-	NHMZ01	179	4445	4138	6/9/17	6/12/17	Scaffold	SRCAMB	SAMN05521434	GCA_002188775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/775/GCA_002188775.1_ASM218877v1	-	SCPM-O-DNA-09
Staphylococcus lugdunensis	28035	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.57183	33.8	chromosome:NZ_CP014022.1/CP014022.1	-	1	2465	2350	2/11/16	4/4/17	Complete Genome	US Food and Drug Administration 	SAMN03996285	GCA_001558775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/775/GCA_001558775.1_ASM155877v1	-	FDAARGOS_141
Candidatus Nitrosopumilus piranensis	1582439	PRJNA269924	269924	TACK group	Thaumarchaeota	1.71308	33.8	chromosome:CP010868.1	-	1	2216	2161	2/13/15	4/20/16	Complete Genome	University of Vienna	SAMN03257648	GCA_000875775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/875/775/GCA_000875775.1_ASM87577v1	-	D3C
Myroides profundi	480520	PRJNA272451	272451	FCB group	Bacteroidetes/Chlorobi group	4.06453	33.8	chromosome:NZ_CP010817.1/CP010817.1	-	1	3635	3467	2/5/15	4/10/17	Complete Genome	Shandong University	SAMN03282272	GCA_000833025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/025/GCA_000833025.1_ASM83302v1	26758181	D25
Staphylococcus lugdunensis N920143	1034809	PRJEA67127	67127	Terrabacteria group	Firmicutes	2.59589	33.8	chromosome:NC_017353.1/FR870271.1	-	1	2498	2383	6/22/11	4/10/17	Complete Genome	Wellcome Trust Sanger Insititute	SAMEA2272235	GCA_000270465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/465/GCA_000270465.1_ASM27046v1	21682763	N920143
Cellulophaga algicola DSM 14237	688270	PRJNA41529	41529	FCB group	Bacteroidetes/Chlorobi group	4.88835	33.8	chromosome:NC_014934.1/CP002453.1	-	1	4275	4156	1/18/11	5/18/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00190054	GCA_000186265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/265/GCA_000186265.1_ASM18626v1	21475589	DSM 14237
Thermoanaerobacterium thermosaccharolyticum M0795	698948	PRJNA60809	60809	Terrabacteria group	Firmicutes	2.89428	33.7123	chromosome:NC_019970.1/CP003066.1; plasmid pTHETHE01:NC_019956.1/CP003067.1	-	2	2863	2689	12/27/12	4/8/17	Complete Genome	JGI	SAMN02261387	GCA_000328545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/545/GCA_000328545.1_ASM32854v1	-	M0795
Yersinia pestis subsp. microtus bv. Xilingolensis	1679171	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.64329	47.6	-	NHNB01	195	4479	4125	6/9/17	6/12/17	Scaffold	SRCAMB	SAMN05521436	GCA_002188815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/815/GCA_002188815.1_ASM218881v1	-	SCPM-O-DNA-11
Pseudomonas fluorescens	294	PRJNA262949	262949	Proteobacteria	Gammaproteobacteria	6.31529	60.3	-	JRXW01	61	5885	5645	12/16/14	4/2/17	Scaffold	"University of Michigan, Ann Arbor"	SAMN03092894	GCA_000801855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/855/GCA_000801855.1_PfAU11518	25635025	AU11518
Dictyoglomus thermophilum H-6-12	309799	PRJNA30731	30731	Dictyoglomi	Dictyoglomia	1.95999	33.7	chromosome:NC_011297.1/CP001146.1	-	1	1934	1862	9/26/08	4/6/17	Complete Genome	The J. Craig Venter Institute	SAMN02603928	GCA_000020965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/965/GCA_000020965.1_ASM2096v1	24558247	H-6-12; ATCC 35947
Staphylococcus epidermidis	1282	PRJNA255947	255947	Terrabacteria group	Firmicutes	2.58352	31.8	-	JZUL01	51	2558	2376	3/31/15	3/25/17	Contig	Cork Institute of Technology	SAMN03396204	GCA_000966715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/715/GCA_000966715.1_ASM96671v1	25977439	NGS-ED-1109
Bacillus cereus VD048	1053226	PRJNA70419	70419	Terrabacteria group	Firmicutes	6.03857	35.3	-	AHEU01	11	6332	5880	8/15/12	6/15/17	Scaffold	Broad Institute	SAMN02596858	GCA_000290915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/915/GCA_000290915.1_Baci_cere_VD048_V1	-	VD048
Lactococcus lactis subsp. cremoris	1359	PRJNA286840	286840	Terrabacteria group	Firmicutes	2.58614	35.4	-	LITD01	374	2618	2253	4/18/16	4/5/17	Contig	Radboudumc	SAMN03770942	GCA_001622365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/365/GCA_001622365.1_ASM162236v1	-	FG2
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.12192	69.1	-	BDNE01	484	4935	4542	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076656	GCA_002089295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/295/GCA_002089295.1_ASM208929v1	28045086	IH-065
Haemophilus influenzae	727	PRJNA302716	302716	Proteobacteria	Gammaproteobacteria	1.77578	37.9	-	LZMV01	24	1759	1623	7/5/16	3/28/17	Scaffold	TAILORED-Treatment project	SAMN05219232	GCA_001679415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/415/GCA_001679415.1_ASM167941v1	-	CCUG 60490
Mycobacterium tuberculosis TRS15	1334061	PRJNA203173	203173	Terrabacteria group	Actinobacteria	4.41153	65.5	chromosome:NZ_CP009184.1/CP009184.1	-	1	4300	4090	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837635	GCA_001998225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/225/GCA_001998225.1_ASM199822v1	27261264	TRS15
Campylobacter sp. NCTC 13003	1660064	PRJNA284979	284979	Proteobacteria	delta/epsilon subdivisions	1.59398	33.6	chromosome:NZ_CP018788.1/CP018788.1	-	1	1618	1543	5/15/17	5/23/17	Complete Genome	"USDA, ARS, WRRC"	SAMN03737976	GCA_002139915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/915/GCA_002139915.1_ASM213991v1	28854596	NCTC 13003
Streptococcus pneumoniae CDC0288-04	453364	PRJNA20545	20545	Terrabacteria group	Firmicutes	2.04981	39.9	-	ABGF01	38	2263	1982	10/9/07	3/9/17	Contig	J. Craig Venter Institute	SAMN00000217	GCA_000171675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/675/GCA_000171675.1_ASM17167v1	-	CDC0288-04
Helicobacter pylori	210	PRJDB4296	362565	Proteobacteria	delta/epsilon subdivisions	1.63295	38.7882	chromosome:AP017341.1; plasmid pHPF38:AP017342.1	-	2	1601	1568	1/18/17	1/18/17	Chromosome	"Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture"	SAMD00042473	GCA_002357355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/355/GCA_002357355.1_ASM235735v1	-	F38
Neisseria meningitidis	487	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	2.18313	49.3	-	JUTD01	95	2155	1979	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197993	GCA_001067315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/315/GCA_001067315.1_ASM106731v1	26230489	782_NMEN
Streptococcus pyogenes ABC020007794	1438999	PRJNA233216	233216	Terrabacteria group	Firmicutes	1.80567	38.6	-	JJGA01	6	1821	1682	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567565	GCA_000630145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/145/GCA_000630145.1_Stre_pyog_ABC020007794_V1	-	ABC020007794
Leptospira interrogans serovar Copenhageni str. Fiocruz LV4211	1291347	PRJNA189015	189015	Spirochaetes	Spirochaetia	4.61443	35	-	AOVB01	142	4127	3766	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920567	GCA_000343285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/285/GCA_000343285.1_CA_glsol160	-	Fiocruz LV4211
Bacillus anthracis	1392	PRJNA257008	257008	Terrabacteria group	Firmicutes	5.45987	35.0732	plasmid pXO1:NZ_CM003248.1/CM003248.1; plasmid pXO2:NZ_CM003249.1/CM003249.1	LBFE01	26	6116	5715	5/1/15	3/26/17	Contig	µFORGE	SAMN02999503	GCA_000986935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/986/935/GCA_000986935.1_BANT002-SEQ-3-ASM-1	-	A1075
Shigella flexneri	623	PRJNA393761	393761	Proteobacteria	Gammaproteobacteria	4.55894	50.5	-	NMXW01	462	5139	4112	8/4/17	8/6/17	Contig	Christian Medical College	SAMN07340963	GCA_002241915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/915/GCA_002241915.1_ASM224191v1	-	FC1824
Bifidobacterium longum subsp. infantis	1682	PRJNA339033	339033	Terrabacteria group	Actinobacteria	2.64013	59.7	-	MOAF01	44	2434	2144	11/7/16	4/5/17	Scaffold	ETH Zurich	SAMN05578879	GCA_001870755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/755/GCA_001870755.1_ASM187075v1	27782805	TPY12-1
Gilliamella apicola	1196095	PRJNA238854	238854	Proteobacteria	Gammaproteobacteria	3.13941	33.6	chromosome:NZ_CP007445.1/CP007445.1	-	1	2828	2702	3/25/14	4/2/17	Complete Genome	Yale University	SAMN03081539	GCA_000599985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/985/GCA_000599985.1_ASM59998v1	25053814	wkB1
Acinetobacter baumannii NIPH 1669	1217643	PRJNA183321	183321	Proteobacteria	Gammaproteobacteria	3.88112	39.1	-	APOQ01	6	3677	3519	4/16/13	3/15/17	Scaffold	Broad Institute	SAMN01828181	GCA_000368105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/105/GCA_000368105.1_Acin_baum_NIPH_1669_V1	-	NIPH 1669
Streptococcus agalactiae GB00911	1154947	PRJNA86567	86567	Terrabacteria group	Firmicutes	2.02565	35.2	-	ALUN01	25	2081	1972	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991430	GCA_000288395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/395/GCA_000288395.1_ASM28839v1	-	GB00911
Streptococcus suis YS44	1214203	PRJNA171465	171465	Terrabacteria group	Firmicutes	2.20716	41.1	-	ALMR01	48	2282	2125	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469515	GCA_000441295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/295/GCA_000441295.1_version1	-	YS44
Pseudomonas syringae pv. atrofaciens str. DSM 50255	629269	PRJNA214371	214371	Proteobacteria	Gammaproteobacteria	5.77727	59.2	-	AWUI01	669	5213	4931	11/22/13	3/24/17	Contig	University of Arizona	SAMN02471577	GCA_000498595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/595/GCA_000498595.1_AtroDSM50255_2.0_130911	-	DSM 50255
Legionella pneumophila	446	PRJNA281039	281039	Proteobacteria	Gammaproteobacteria	3.4265	38.2	-	LAXW01	28	3126	2967	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03481693	GCA_001582295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/295/GCA_001582295.1_ASM158229v1	26888563	SZ099
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.89113	50.6	-	NQAQ01	116	5151	4790	8/11/17	8/15/17	Contig	JCVI	SAMN07450591	GCA_002246815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/815/GCA_002246815.1_ASM224681v1	-	ECCRETH02
Bacteroides fragilis	817	PRJNA254401	254401	FCB group	Bacteroidetes/Chlorobi group	5.29716	43.7	-	JPHS01	343	4573	4244	7/11/14	4/2/17	Contig	Odense University Hospital	SAMN02903368	GCA_000724805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/805/GCA_000724805.1_DCMOUH0067B_1.0	-	DCMOUH0067B
Lactobacillus reuteri	1598	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.56064	38.6	-	DBPH01	94	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06450715	GCA_002299755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/755/GCA_002299755.1_ASM229975v1	28894102	-
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.73758	67.2	-	MUSB01	133	7469	6952	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001867	GCA_001992045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/045/GCA_001992045.1_ASM199204v1	-	VC7780
Burkholderia pseudomallei MSHR435	1435985	PRJNA231480	231480	Proteobacteria	Betaproteobacteria	7.13324	67.9924	chromosome 1:NZ_CM003019.1/CM003019.1; chromosome 2:NZ_CM003020.1/CM003020.1	JRFP01	2	13493	12765	11/11/14	4/10/17	Chromosome	Los Alamos National Laboratory	SAMN02999478	GCA_000775165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/165/GCA_000775165.1_BPD	25676747	MSHR435
Chlamydia trachomatis IU888	1260223	PRJEB627	186494	PVC group	Chlamydiae	1.05052	41.2636	chromosome:NC_020512.1/HF562300.1; plasmid pIU888:NC_020513.1/HF562301.1	-	2	974	906	3/15/13	3/23/17	Chromosome	SOTON	SAMEA2272485	GCA_000348825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/825/GCA_000348825.1_ASM34882v1	23378575	IU888
Bacillus thuringiensis serovar guiyangiensis	180871	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.60138	35.1	-	NFCZ01	41	5990	5612	5/17/17	6/15/17	Contig	Huazhong Agricultural University	SAMN05934515	GCA_002146605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/605/GCA_002146605.1_ASM214660v1	-	BGSC 4BC1
Vibrio cholerae HC-55C2	991972	PRJNA63951	63951	Proteobacteria	Gammaproteobacteria	3.94019	47.8	-	AJRR01	125	3759	3536	10/10/12	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00722972	GCA_000305015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/015/GCA_000305015.2_ASM30501v2	-	HC-55C2
Clostridioides difficile DA00306	1151360	PRJNA85895	85895	Terrabacteria group	Firmicutes	4.08025	28.4	-	AVKI01	68	3842	3639	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766677	GCA_000449205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/205/GCA_000449205.2_ASM44920v2	-	DA00306
Francisella tularensis	263	PRJNA257008	257008	Proteobacteria	Gammaproteobacteria	1.80862	32.2	-	LVKX01	116	1942	1558	8/2/16	4/5/17	Contig	µFORGE	SAMN04260148	GCA_001696925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/925/GCA_001696925.1_FTUL004-SEQ-1-ASM-1	-	503
Brucella abortus 82-2330	1328342	PRJNA200925	200925	Proteobacteria	Alphaproteobacteria	3.28204	57.2	-	ATHD01	4	3377	3153	6/21/13	3/24/17	Scaffold	Broad Institute	SAMN02092505	GCA_000414015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/015/GCA_000414015.1_Bruc_abor_biovar_1_82-2330_V1	-	82-2330
Xanthomonas citri subsp. citri	611301	PRJEB7201	265979	Proteobacteria	Gammaproteobacteria	5.32484	64.6	-	CDHD01	1312	5225	4222	11/19/14	4/2/17	Contig	CIRAD	SAMEA2827228	GCA_000825545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/545/GCA_000825545.1_XACE116	-	LE116-1
Xanthomonas oryzae pv. oryzae	64187	PRJNA269426	269426	Proteobacteria	Gammaproteobacteria	4.23617	64	-	JXEW01	432	4203	3412	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252540	GCA_001928405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/405/GCA_001928405.1_ASM192840v1	-	DXO-150
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.97376	38	-	MLNC01	221	2034	1808	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297068	GCA_001868025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/025/GCA_001868025.1_ASM186802v1	27118061	AWRIB431
Vibrio parahaemolyticus AN-5034	563773	PRJNA33625	33625	Proteobacteria	Gammaproteobacteria	5.1999	45.3	-	ACFO01	54	4999	4750	2/3/09	5/19/17	Contig	J Craig Venter Institute	SAMN02436265	GCA_000182385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/182/385/GCA_000182385.1_ASM18238v1	21645368	AN-5034
Bacillus subtilis	1423	PRJNA248606	248606	Terrabacteria group	Firmicutes	4.16804	43.4	-	JNCN01	35	4375	4254	5/30/14	3/24/17	Contig	Tianjin university	SAMN02799704	GCA_000696615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/615/GCA_000696615.1_ASM69661v1	-	E72
Candidatus Nitrosopumilus sediminis	1229909	PRJNA174388	174388	TACK group	Thaumarchaeota	1.69091	33.6	chromosome:NC_018656.1/CP003843.1	-	1	2024	1949	9/27/12	4/8/17	Complete Genome	Chungbuk National University	SAMN02603138	GCA_000299395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/395/GCA_000299395.1_ASM29939v1	23209211	AR2
Clostridium botulinum C/D str. DC5	1443128	PRJNA233461	233461	Terrabacteria group	Firmicutes	3.32578	28.2	-	JDRY01	179	3253	2921	10/24/14	3/24/17	Contig	National Veterinary Institute (SVA)	SAMN02593750	GCA_000768595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/595/GCA_000768595.1_DC5_1.0	-	DC5
Enterococcus faecalis EnGen0065	1151186	PRJNA85623	85623	Terrabacteria group	Firmicutes	3.33063	37.3	-	AIIK01	33	3503	3304	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00792299	GCA_000390505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/505/GCA_000390505.1_Ente_faec_B15725_V1	-	B15725
Streptococcus mutans 4SM1	857150	PRJNA49763	49763	Terrabacteria group	Firmicutes	2.00534	36.7	-	AHRL01	97	1911	1826	2/11/13	3/23/17	Contig	Cornell University	SAMN02429083	GCA_000339175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/175/GCA_000339175.1_ASM33917v1	23228887	4SM1
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14596	52.4	-	CQKP01	73	2509	2192	3/22/15	4/10/17	Contig	SC	SAMEA1690413	GCA_001095225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/225/GCA_001095225.1_8727_8_21	-	GCGS117
Enterococcus faecium LCT-EF20	1245477	PRJNA177986	177986	Terrabacteria group	Firmicutes	2.80907	38.6	-	ANAI01	34	2774	2584	11/9/12	3/23/17	Scaffold	BGI-shenzhen	SAMN02469379	GCA_000313155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/155/GCA_000313155.1_ASM31315v1	23405294	LCT-EF20
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.83374	66.2	-	JVWW01	102	4476	4305	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197220	GCA_001068915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/915/GCA_001068915.1_ASM106891v1	26230489	1253_SMAL
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12974	41.2	-	CWBG01	76	2065	1891	6/24/15	3/26/17	Contig	SC	SAMEA1032849	GCA_001176645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/645/GCA_001176645.1_6903_4_65	-	EQUI0114
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.29583	40.3	-	LQFL01	29	2155	2057	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366559	GCA_001930765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/765/GCA_001930765.1_ASM193076v1	-	3045PM
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	3.12417	46.5	-	JTIX01	239	3231	2872	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196620	GCA_001657195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/195/GCA_001657195.1_ASM165719v1	-	Lrh33
Brucella melitensis 16M13W	1143191	PRJNA82689	82689	Proteobacteria	Alphaproteobacteria	3.25999	57.2	-	AHWE01	77	3334	3126	2/28/12	3/30/17	Contig	"Chinese PLA Institute for Disease Control & Prevention, Academy of Military Medical Sciences"	SAMN02469570	GCA_000250835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/835/GCA_000250835.2_ASM25083v2	22965104	16M13W
Methanocaldococcus infernus ME	573063	PRJNA32611	32611	Euryarchaeota	Methanococci	1.32819	33.6	chromosome:NC_014122.1/CP002009.1	-	1	1504	1437	4/30/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00017484	GCA_000092305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/305/GCA_000092305.1_ASM9230v1	-	ME
Corynebacterium diphtheriae	1717	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.3971	53.6	-	MSIR01	40	2325	2114	6/20/17	6/22/17	Contig	Northumbria University	SAMN06174249	GCA_002201215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/215/GCA_002201215.1_ASM220121v1	-	2379
Yersinia enterocolitica	630	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	4.55179	47.3	-	CQDJ01	99	4313	4033	3/22/15	3/26/17	Scaffold	SC	SAMEA1486286	GCA_001105265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/265/GCA_001105265.1_8016_2_79	-	SC9312-78
Serratia marcescens	615	PRJNA395789	395789	Proteobacteria	Gammaproteobacteria	5.08355	59.8	-	NOMA01	371	5021	4377	8/22/17	8/24/17	Contig	CSIR-National Environmental Engineering Research Institute (CSIR-NEERI)	SAMN07414822	GCA_002265665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/665/GCA_002265665.1_ASM226566v1	-	EGD-HP20_1
Lactobacillus plantarum	1590	PRJNA314089	314089	Terrabacteria group	Firmicutes	3.12852	44.6	-	LUWU01	56	3038	2847	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04528815	GCA_001633435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/435/GCA_001633435.1_ASM163343v1	-	Nizo2753
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.68573	31.3	-	CUKX01	10	1754	1665	3/31/15	3/18/17	Contig	SC	SAMEA1010592	GCA_001223945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/945/GCA_001223945.1_7038_3_88	-	OXC6338
Burkholderia sp. AU28863	2015352	PRJNA391085	391085	Proteobacteria	Betaproteobacteria	7.55603	67	-	NKFE01	30	7021	6689	7/20/17	7/22/17	Contig	University of Michigan	SAMN07257387	GCA_002223195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/195/GCA_002223195.1_ASM222319v1	-	AU28863
Propionibacterium acnes HL042PA3	1226748	PRJNA173664	173664	Terrabacteria group	Actinobacteria	2.48246	60	-	AXZT01	12	2471	2266	10/29/13	4/2/17	Contig	"University of California, Los Angeles"	SAMN02471689	GCA_000488875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/875/GCA_000488875.1_P._acnes_HL042PA3_version_1.0	-	HL042PA3
Staphylococcus haemolyticus	1283	PRJNA305005	305005	Terrabacteria group	Firmicutes	2.36338	32.7	-	LRBN01	74	2317	2205	1/22/16	3/27/17	Contig	Institute of Life Sciences	SAMN04316315	GCA_001529375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/375/GCA_001529375.1_ASM152937v1	26988040	SHN36
Enterobacter cloacae	550	PRJNA287088	287088	Proteobacteria	Gammaproteobacteria	5.21286	54.5	-	LFLG01	127	5135	4849	7/31/15	3/26/17	Contig	University of Malaya	SAMN03776116	GCA_001190105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/190/105/GCA_001190105.1_ASM119010v1	-	CB2
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.00121	55	-	FLAI01	83	5749	5469	5/19/16	2/21/17	Scaffold	SC	SAMEA2273860	GCA_900084045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/045/GCA_900084045.1_12082_5_29	-	2880STDY5682786
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.64949	56.6	-	NDXD01	153	4621	4373	4/28/17	5/3/17	Contig	FDA/CFSAN	SAMN06100274	GCA_002114505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/505/GCA_002114505.1_ASM211450v1	-	MOD1-Lc10s
Mycobacterium abscessus MAB_082312_2273	1335413	PRJNA245250	245250	Terrabacteria group	Actinobacteria	5.42447	63.9	-	JMIA01	1148	5047	4923	6/27/14	3/16/17	Contig	K L E S C E T	SAMN02736729	GCA_000715335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/335/GCA_000715335.1_denovo_assembly	-	MAB_082312_2273
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.97736	67	-	LPAE01	173	7347	6905	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449340	GCA_001527885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/885/GCA_001527885.1_ASM152788v1	-	MSMB1586WGS
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	4.23992	39.1	-	MDIM01	313	4207	3986	8/17/16	4/5/17	Contig	University of Cologne	SAMN05022871	GCA_001706775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/775/GCA_001706775.1_ASM170677v1	-	UKK-0548
Citrobacter freundii	546	PRJNA383974	383974	Proteobacteria	Gammaproteobacteria	5.51355	51.4	-	NEFB01	176	5721	5245	8/15/17	8/17/17	Scaffold	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN06820763	GCA_002252065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/065/GCA_002252065.1_ASM225206v1	-	181
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.40473	54.8	-	JZYN01	128	5435	5171	3/19/15	3/25/17	Contig	JCVI	SAMN03283687	GCA_000958155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/155/GCA_000958155.1_ASM95815v1	-	39373
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.08797	55.1	-	LVUN01	120	5111	4754	4/25/16	4/6/17	Contig	JCVI	SAMN04572689	GCA_001631185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/185/GCA_001631185.1_ASM163118v1	-	GN05695
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18697	64.1	-	FVLQ01	24	5206	5014	3/10/17	3/18/17	Scaffold	SC	SAMEA2259680	GCA_900135895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/895/GCA_900135895.1_11893_6_38	-	875
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.30963	66.8	-	LPJA01	79	7722	7362	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449578	GCA_001532705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/705/GCA_001532705.1_ASM153270v1	-	MSMB2177WGS
Pseudomonas sp. HMSC066A08	1739390	PRJNA300040	300040	Proteobacteria	Gammaproteobacteria	6.84224	66	-	LTXL01	229	6629	6303	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480056	GCA_001813025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/025/GCA_001813025.1_ASM181302v1	-	HMSC066A08
Streptomyces sp. NRRL B-3253	1463837	PRJNA238534	238534	Terrabacteria group	Actinobacteria	6.99299	73.5	-	JOGQ01	123	6081	5860	7/15/14	3/11/17	Scaffold	University of Illinois	SAMN02645459	GCA_000725635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/635/GCA_000725635.1_Doro.v1.0	-	NRRL B-3253
Bacillus sp. H1m	1397277	PRJNA226206	226206	Terrabacteria group	Firmicutes	5.70263	35	-	AYMM01	178	5981	5655	4/18/14	4/9/17	Contig	University of Malaya	SAMN02729847	GCA_000633295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/295/GCA_000633295.1_de_novo	-	H1m
Acinetobacter sp. 1566109	1310683	PRJNA194759	194759	Proteobacteria	Gammaproteobacteria	4.2053	38.7	-	JEYB01	269	4227	3796	2/25/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02385034	GCA_000582255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/255/GCA_000582255.1_ASM58225v1	-	1566109
Sphingomonas sp. 1PNM-20	1141887	PRJNA400523	400523	Proteobacteria	Alphaproteobacteria	3.75743	69.8	-	NSLI01	10	3618	3515	9/10/17	9/18/17	Contig	Guangdong Institute of Microbiology	SAMN07569659	GCA_002288825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/825/GCA_002288825.1_ASM228882v1	-	1PNM-20
Clostridium sp. CAG:1024	1262770	PRJEB678	206622	Terrabacteria group	Firmicutes	2.00453	56.6	-	CAWJ01	191	1946	1915	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138488	GCA_000432015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/015/GCA_000432015.1_MGS1024	-	-
Rhodococcus sp. 05-2254-3	2022494	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.88703	64.6	-	NOZI01	33	5585	5432	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376364	GCA_002258555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/555/GCA_002258555.1_ASM225855v1	-	05-2254-3
Enterobacter cloacae complex sp. GN02570	1870946	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.18593	55.4	-	LEES01	129	5099	4824	6/9/15	4/20/17	Contig	JCVI	SAMN03732716	GCA_001022655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/655/GCA_001022655.1_ASM102265v1	-	GN02570
Staphylococcus sp. HMSC055H07	1739541	PRJNA300192	300192	Terrabacteria group	Firmicutes	2.80827	32.7	-	LTSN01	79	2925	2803	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480458	GCA_001815665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/665/GCA_001815665.1_ASM181566v1	-	HMSC055H07
Corynebacterium sp. HMSC22B11	1581056	PRJNA269825	269825	Terrabacteria group	Actinobacteria	2.30546	64.9	-	LTNI01	65	2022	1904	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436205	GCA_001815965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/965/GCA_001815965.1_ASM181596v1	-	HMSC22B11
Arthrobacter sp. Hiyo6	1588022	PRJDB3373	291832	Terrabacteria group	Actinobacteria	2.59473	63.3	-	BBUE01	630	3799	3767	8/4/15	1/19/16	Contig	"Department of Computational Biology, Graduate School of Frontier Sciences, The University of Tokyo"	SAMD00024044	GCA_001263635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/635/GCA_001263635.1_ASM126363v1	26764021	Hiyo6
Streptococcus sp. HMSC065H07	1715116	PRJNA296244	296244	Terrabacteria group	Firmicutes	2.28471	39.5	-	LTPK01	52	2135	2009	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498619	GCA_001837325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/325/GCA_001837325.1_ASM183732v1	-	HMSC065H07
Mycobacterium sp. E1214	1834123	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.35578	69.5	-	LZJC01	174	5055	4744	6/17/16	4/13/17	Contig	JCVI	SAMN04634238	GCA_001666755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/755/GCA_001666755.1_ASM166675v1	-	E1214
Prevotella sp. UBA640	1947184	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.08952	43.5	-	DBOS01	211	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457572	GCA_002299275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/275/GCA_002299275.1_ASM229927v1	28894102	-
Paenibacillus sp. OK060	1881034	PRJEB16043	348487	Terrabacteria group	Firmicutes	7.24315	45.7	-	FNFR01	30	6436	6230	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428961	GCA_900101205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/205/GCA_900101205.1_IMG-taxon_2684623002_annotated_assembly	-	OK060
uncultured Ruminococcus sp.	165186	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.27217	40.4	-	FMHA01	23	2145	2094	8/16/16	8/16/16	Scaffold	SC	SAMEA3545435	GCA_900067015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/067/015/GCA_900067015.1_14207_7_95	-	-
Prochlorococcus sp. scB243_498B22	1471488	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.47614	31.2	-	JFMM01	187	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671359	GCA_000634975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/975/GCA_000634975.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. P0107	1895604	PRJNA341022	341022	Proteobacteria	delta/epsilon subdivisions	1.74281	33.5	-	MJKI01	15	1794	1703	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687042	GCA_002139585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/585/GCA_002139585.1_ASM213958v1	28854596	P0107
Rhizobium sp. Root1240	1736437	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	4.56964	61.2	-	LMDR01	14	4441	4305	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155706	GCA_001425145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/145/GCA_001425145.1_Root1240	26633631	Root1240
Mesorhizobium sp. WSM3876	422277	PRJNA399611	399611	Proteobacteria	Alphaproteobacteria	6.20656	63.3	-	NSGA01	56	6030	5649	9/12/17	9/14/17	Contig	Curtin University	SAMN07540844	GCA_002294945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/945/GCA_002294945.1_ASM229494v1	-	WSM3876
Microbacterium sp. 69-10	1895783	PRJNA279279	279279	Terrabacteria group	Actinobacteria	3.47876	69	-	MKRT01	34	3474	3115	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660510	GCA_001897945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/945/GCA_001897945.1_ASM189794v1	-	-
Bacillus velezensis	492670	PRJNA253035	253035	Terrabacteria group	Firmicutes	3.99751	46.4	-	JOKF01	65	-	-	7/21/14	9/25/14	Contig	university of jammu	SAMN02866194	GCA_000732055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/055/GCA_000732055.1_ASM73205v1	25212614	W2
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.79173	57	-	FXRR01	141	5848	5439	4/28/17	5/6/17	Scaffold	SC	SAMEA2609533	GCA_900181965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/965/GCA_900181965.1_14936_2_53	-	3189STDY5864906
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.8401	32.3	-	FQMD01	13	2866	2692	11/23/16	4/5/17	Scaffold	SC	SAMEA3449128	GCA_900126945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/945/GCA_900126945.1_17175_3_72	-	3688STDY6125126
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.69985	32.2	-	FQMI01	13	2655	2491	11/24/16	4/5/17	Scaffold	SC	SAMEA3449135	GCA_900127005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/005/GCA_900127005.1_17175_3_79	-	3688STDY6125133
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.79304	57	-	FXRS01	120	5863	5488	4/28/17	5/6/17	Scaffold	SC	SAMEA2609534	GCA_900181975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/975/GCA_900181975.1_14936_2_54	-	3189STDY5864907
Microbacterium sp. 69-7	1895784	PRJNA279279	279279	Terrabacteria group	Actinobacteria	2.9084	69.4	-	MKRU01	114	2862	2635	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660511	GCA_001897985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/985/GCA_001897985.1_ASM189798v1	-	-
Mesorhizobium sp. WSM3864	2029404	PRJNA399611	399611	Proteobacteria	Alphaproteobacteria	6.27534	63.3	-	NSGD01	60	6098	5757	9/12/17	9/14/17	Contig	Curtin University	SAMN07540841	GCA_002294955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/955/GCA_002294955.1_ASM229495v1	-	WSM3864
Rhizobium sp. Leaf453	1736380	PRJNA297956	297956	Proteobacteria	Alphaproteobacteria	6.36845	60.1	-	LMRG01	31	6115	5888	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151770	GCA_001425605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/605/GCA_001425605.1_Leaf453	26633631	Leaf453
Campylobacter sp. P0111	1895607	PRJNA341025	341025	Proteobacteria	delta/epsilon subdivisions	1.70012	33.3	-	MJKL01	29	1758	1669	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687045	GCA_002139615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/615/GCA_002139615.1_ASM213961v1	28854596	P0111
Prochlorococcus sp. scB243_498C16	1471490	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.47723	31.2	-	JFMO01	281	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671361	GCA_000634995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/634/995/GCA_000634995.1_De_novo_assembly_of_single-cell_genomes	24763590	-
uncultured Ruminococcus sp.	165186	PRJEB10915	297013	Terrabacteria group	Firmicutes	5.98977	47.4	-	FMFL01	126	5569	5477	8/16/16	8/16/16	Scaffold	SC	SAMEA3545436	GCA_900067025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/067/025/GCA_900067025.1_14207_6_1	-	-
Paenibacillus sp. CF095	1881033	PRJEB15753	347665	Terrabacteria group	Firmicutes	7.37915	45.6	-	FMZN01	16	6361	6166	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428987	GCA_900101225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/225/GCA_900101225.1_IMG-taxon_2690315662_annotated_assembly	-	CF095
Prevotella sp. UBA641	1947185	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.7244	50.5	-	DBOR01	203	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457573	GCA_002299635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/635/GCA_002299635.1_ASM229963v1	28894102	-
Mycobacterium sp. E3305	1834145	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.65216	68.4	-	LZJA01	312	5453	5060	6/17/16	4/13/17	Contig	JCVI	SAMN04634239	GCA_001666785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/785/GCA_001666785.1_ASM166678v1	-	E3305
Streptococcus sp. HMSC066F01	1715134	PRJNA296262	296262	Terrabacteria group	Firmicutes	1.95833	41.2	-	LTPJ01	59	1974	1842	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498629	GCA_001837335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/335/GCA_001837335.1_ASM183733v1	-	HMSC066F01
Arthrobacter sp. JCM 19049	1460643	PRJDB1621	245974	Terrabacteria group	Actinobacteria	2.92182	64.5	-	BAXF01	972	-	-	10/1/15	10/1/15	Contig	"Microbe Division/JCM, RIKEN BioResource Center"	SAMD00000380	GCA_001310435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/435/GCA_001310435.1_ASM131043v1	-	JCM 19049
Corynebacterium sp. HMSC27B11	1581065	PRJNA269834	269834	Terrabacteria group	Actinobacteria	2.19327	65.1	-	LWPQ01	58	1898	1795	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN03436214	GCA_001815985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/985/GCA_001815985.1_ASM181598v1	-	HMSC27B11
Staphylococcus sp. HMSC068G11	1739550	PRJNA300201	300201	Terrabacteria group	Firmicutes	2.42946	32	-	LTSF01	51	2376	2264	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480465	GCA_001815825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/825/GCA_001815825.1_ASM181582v1	-	HMSC068G11
Enterobacter cloacae complex sp. GN02587	1870947	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.89292	56.1	-	LEDN01	70	4838	4602	6/9/15	4/10/17	Contig	JCVI	SAMN03732717	GCA_001022675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/675/GCA_001022675.1_ASM102267v1	-	GN02587
Rhodococcus sp. 05-2254-6	2022489	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.66007	64.7	-	NOZF01	195	5485	5107	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376359	GCA_002258565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/565/GCA_002258565.1_ASM225856v1	-	05-2254-6
Clostridium sp. CAG:264	1262786	PRJEB796	206741	Terrabacteria group	Firmicutes	2.52926	41.4	-	CAYM01	71	2160	2136	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138503	GCA_000432315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/315/GCA_000432315.1_MGS264	-	-
Sphingomonas sp. YR710	1882773	PRJEB15750	347668	Proteobacteria	Alphaproteobacteria	4.36125	62.9	-	FMZJ01	47	4030	3936	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444678	GCA_900101455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/455/GCA_900101455.1_IMG-taxon_2687453684_annotated_assembly	-	YR710
Acinetobacter sp. 1592897	1310696	PRJNA194772	194772	Proteobacteria	Gammaproteobacteria	4.14002	38.9	-	JEYK02	29	4105	3746	2/25/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02385044	GCA_000582315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/315/GCA_000582315.2_ASM58231v2	-	1592897
Bacillus sp. H1a	1397276	PRJNA226201	226201	Terrabacteria group	Firmicutes	5.75143	35	-	AYMH01	167	6190	5609	4/18/14	4/9/17	Contig	University of Malaya	SAMN02729850	GCA_000633475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/475/GCA_000633475.1_de_novo	-	H1a
Streptomyces sp. NRRL F-5635	1463865	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.87983	72.6	-	JOGJ01	132	7045	6675	7/15/14	3/11/17	Scaffold	University of Illinois	SAMN02645452	GCA_000725645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/645/GCA_000725645.1_Doro.v1.0	-	NRRL F-5635
Pseudomonas sp. HMSC065H02	1739410	PRJNA300060	300060	Proteobacteria	Gammaproteobacteria	6.95445	66	-	LTWV01	145	6791	6483	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480075	GCA_001813325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/325/GCA_001813325.1_ASM181332v1	-	HMSC065H02
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.93481	66.4	-	LPKB01	112	8344	7940	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449607	GCA_001532885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/885/GCA_001532885.1_ASM153288v1	-	MSMB591WGS
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.1825	64	-	FSIB01	34	5222	5028	12/14/16	3/21/17	Scaffold	SC	SAMEA2275705	GCA_900135995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/995/GCA_900135995.1_12163_1_54	-	979
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.16933	55	-	LVUT01	41	5075	4860	4/25/16	4/6/17	Contig	JCVI	SAMN04572695	GCA_001631215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/215/GCA_001631215.1_ASM163121v1	-	GN05905
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.90075	55.3	-	JZYM01	75	4817	4591	3/19/15	3/25/17	Contig	JCVI	SAMN03283652	GCA_000958165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/165/GCA_000958165.1_ASM95816v1	-	39379
Citrobacter freundii	546	PRJNA383979	383979	Proteobacteria	Gammaproteobacteria	5.84223	51.6	-	NEEZ01	172	6072	5655	8/15/17	8/17/17	Scaffold	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN06820767	GCA_002252125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/125/GCA_002252125.1_ASM225212v1	-	c196
Acinetobacter pittii	48296	PRJNA319130	319130	Proteobacteria	Gammaproteobacteria	3.86639	38.8	-	LYQN01	155	3710	3546	8/18/16	4/5/17	Contig	University of Florida	SAMN04961138	GCA_001707545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/545/GCA_001707545.1_ASM170754v1	-	KCJK1729
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.6939	67.3	-	LPAG01	89	7051	6681	1/22/16	6/27/17	Contig	Northern Arizona University	SAMN03449343	GCA_001527905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/905/GCA_001527905.1_ASM152790v1	-	MSMB1592WGS
Mycobacterium abscessus	36809	PRJNA248380	248380	Terrabacteria group	Actinobacteria	5.34297	64.2	-	LGCJ01	31	5412	5210	7/27/15	3/18/17	Contig	ChunLab Inc.	SAMN03856544	GCA_001187745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/745/GCA_001187745.1_ASM118774v1	-	UC95
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.70486	56.5	-	NDXE01	158	4692	4435	4/28/17	5/3/17	Contig	FDA/CFSAN	SAMN06100273	GCA_002114515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/515/GCA_002114515.1_ASM211451v1	-	MOD1-Lc10g
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.51932	57.1	-	FLCV01	44	5598	5370	7/29/16	2/21/17	Scaffold	SC	SAMEA2273523	GCA_900084675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/675/GCA_900084675.1_12045_5_91	-	k142b
Enterobacter cloacae subsp. cloacae	336306	PRJNA285410	285410	Proteobacteria	Gammaproteobacteria	4.95003	55.3	-	LDVU01	269	4867	4622	8/31/15	3/26/17	Contig	University of Queensland	SAMN03753639	GCA_001276405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/405/GCA_001276405.1_ASM127640v1	-	B2
Staphylococcus haemolyticus	1283	PRJNA305007	305007	Terrabacteria group	Firmicutes	2.33488	32.7	-	LRHO01	100	2306	2171	1/22/16	3/27/17	Contig	Institute of Life Sciences	SAMN04316316	GCA_001529395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/395/GCA_001529395.1_ASM152939v1	26988040	SHN65
Propionibacterium acnes PA2	1292038	PRJNA188766	188766	Terrabacteria group	Actinobacteria	2.52626	60	-	APCV01	138	2567	2375	11/14/13	4/2/17	Contig	Aarhus University	SAMN02469302	GCA_000496895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/895/GCA_000496895.1_PA2_assembly2012	24356837	PA2
Burkholderia sp. AU27893	2015351	PRJNA391085	391085	Proteobacteria	Betaproteobacteria	8.58364	66.5	-	NKFD01	26	7994	7637	7/20/17	7/22/17	Contig	University of Michigan	SAMN07257386	GCA_002223205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/205/GCA_002223205.1_ASM222320v1	-	AU27893
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.74519	31.3	-	CUOD01	15	1839	1745	3/31/15	3/18/17	Contig	SC	SAMEA1010408	GCA_001224065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/065/GCA_001224065.1_7065_7_76	-	OXC6424
Lactobacillus plantarum	1590	PRJNA314095	314095	Terrabacteria group	Firmicutes	3.12458	44.5	-	LUWX01	190	3140	2767	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04528821	GCA_001633455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/455/GCA_001633455.1_ASM163345v1	-	Nizo2776
Serratia marcescens	615	PRJEB16676	352359	Proteobacteria	Gammaproteobacteria	5.84624	58.3	-	FNXW01	339	5790	5404	11/3/16	3/28/17	Contig	JLU	SAMEA4524859	GCA_900108835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/835/GCA_900108835.1_SM1978	-	-
Yersinia enterocolitica	630	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	4.64321	46.8	-	CPZA01	177	4420	3962	3/23/15	3/26/17	Scaffold	SC	SAMEA1486392	GCA_001105985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/985/GCA_001105985.1_8016_2_86	-	IP01119
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.44185	53.5	-	LSVM01	28	2349	2180	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496955	GCA_002202335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/335/GCA_002202335.1_ASM220233v1	-	72
Campylobacter hyointestinalis subsp. lawsonii	91353	PRJNA66797	66797	Proteobacteria	delta/epsilon subdivisions	1.75328	33.5	chromosome:NZ_CP015576.1/CP015576.1	-	1	1831	1742	5/16/16	4/12/17	Complete Genome	"USDA, ARS, WRRC"	SAMN03737974	GCA_001643975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/975/GCA_001643975.1_ASM164397v1	27417840	LMG 15993
Brucella melitensis M5-10	1210452	PRJNA170710	170710	Proteobacteria	Alphaproteobacteria	3.28279	57.2	-	ALOR01	81	3337	3122	8/20/12	3/30/17	Contig	Beijing Institute of Disease Control and Prevention	SAMN02469338	GCA_000292065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/065/GCA_000292065.1_ASM29206v1	23045513	M5-10
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.93475	46.7	-	JUIP01	74	2956	2766	6/3/16	4/5/17	Contig	Wageningen University	SAMN03196661	GCA_001657205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/205/GCA_001657205.1_ASM165720v1	-	Lrh42
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.29393	40.3	-	LQFT01	31	2156	2055	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366567	GCA_001930875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/875/GCA_001930875.1_ASM193087v1	-	3275PM
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.13744	41.1	-	CWCE01	78	2074	1902	6/23/15	3/26/17	Contig	SC	SAMEA1032850	GCA_001176665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/665/GCA_001176665.1_6903_5_83	-	EQUI0132
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.43611	66.3	-	JVVX01	359	4127	3941	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197245	GCA_001068965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/965/GCA_001068965.1_ASM106896v1	26230489	1275_SMAL
Enterococcus faecium LCT-EF258	1245478	PRJNA177987	177987	Terrabacteria group	Firmicutes	2.80745	38.6	-	ANAJ01	26	2776	2580	11/9/12	4/10/17	Scaffold	BGI-shenzhen	SAMN02469383	GCA_000313195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/195/GCA_000313195.1_ASM31319v1	23409254	LCT-EF258
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.14949	52.4	-	CQKJ01	71	2529	2200	3/23/15	4/11/17	Contig	SC	SAMEA1677414	GCA_001095465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/465/GCA_001095465.1_8727_5_75	-	GCGS225
Streptococcus mutans 2ST1	857148	PRJNA49767	49767	Terrabacteria group	Firmicutes	1.96556	36.7	-	AHRN01	111	1945	1864	2/11/13	3/23/17	Contig	Cornell University	SAMN02428984	GCA_000339195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/195/GCA_000339195.1_ASM33919v1	23228887	2ST1
Enterococcus faecalis EnGen0062	1151187	PRJNA85625	85625	Terrabacteria group	Firmicutes	3.00378	37.4	-	AIIL01	3	3072	2877	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00792310	GCA_000390525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/525/GCA_000390525.1_Ente_faec_B16457_V1	-	B16457
Clostridium botulinum D str. CCUG 7971	1443116	PRJNA233462	233462	Terrabacteria group	Firmicutes	2.80847	28.1	-	JDRZ01	111	2684	2444	10/24/14	3/24/17	Contig	National Veterinary Institute (SVA)	SAMN02593751	GCA_000768655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/655/GCA_000768655.1_CCUG7971_1.0	-	CCUG 7971
Siansivirga zeaxanthinifaciens CC-SAMT-1	1454006	PRJNA236449	236449	FCB group	Bacteroidetes/Chlorobi group	3.30399	33.5	chromosome:NZ_CP007202.1/CP007202.1	-	1	2889	2785	3/4/15	4/17/17	Complete Genome	none	SAMN03379851	GCA_000941055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/055/GCA_000941055.1_ASM94105v1	-	CC-SAMT-1
Bacillus subtilis E1	1290773	PRJEB1410	253377	Terrabacteria group	Firmicutes	4.10625	43.6	-	CAUC01	16	4236	4086	6/25/14	3/24/17	Contig	UNIMI	SAMEA3139064	GCA_000724125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/125/GCA_000724125.1_BSUBE1	-	E1
Vibrio parahaemolyticus K5030	627611	PRJNA36311	36311	Proteobacteria	Gammaproteobacteria	5.02824	45.3	-	ACKB01	164	4807	4547	3/31/09	5/19/17	Contig	MSC	SAMN02436183	GCA_000182465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/182/465/GCA_000182465.1_ASM18246v1	21645368	K5030
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.98049	37.8	-	MLNG01	381	2021	1765	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297072	GCA_001868035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/035/GCA_001868035.1_ASM186803v1	27118061	AWRIB436
Xanthomonas oryzae pv. oryzae	64187	PRJNA269428	269428	Proteobacteria	Gammaproteobacteria	4.32784	63.9	-	JXEY01	408	4356	3520	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252525	GCA_001928415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/415/GCA_001928415.1_ASM192841v1	-	DXO-170
Xanthomonas citri subsp. citri	611301	PRJEB7202	265980	Proteobacteria	Gammaproteobacteria	5.32484	64.6	-	CDHC01	1312	5225	4222	11/19/14	4/3/17	Contig	CIRAD	SAMEA2827227	GCA_000825565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/565/GCA_000825565.1_XACE116	-	NCPPB 3615
Brucella abortus BC95	1328361	PRJNA213741	213741	Proteobacteria	Alphaproteobacteria	3.2553	57.2	-	AXMO01	71	3382	3098	10/21/13	3/24/17	Scaffold	Broad Institute	SAMN02297859	GCA_000477635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/635/GCA_000477635.1_Bruc_abor_BC95_V1	-	BC95
Francisella tularensis	263	PRJNA257008	257008	Proteobacteria	Gammaproteobacteria	1.7913	32.2	-	LVKW01	134	1860	1542	8/2/16	4/5/17	Contig	µFORGE	SAMN04260147	GCA_001696935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/935/GCA_001696935.1_FTUL005-SEQ-1-ASM-1	-	RUSS
Clostridioides difficile CD70	1151275	PRJNA85723	85723	Terrabacteria group	Firmicutes	4.05598	28.4	-	AVHF01	184	3812	3580	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766625	GCA_000449225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/225/GCA_000449225.2_ASM44922v2	-	CD70
Vibrio cholerae HC-60A1	992005	PRJNA64017	64017	Proteobacteria	Gammaproteobacteria	3.938	47.8	-	AJRT01	132	3757	3537	10/10/12	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00727941	GCA_000305055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/055/GCA_000305055.2_ASM30505v2	-	HC-60A1
Bacillus thuringiensis serovar roskildiensis	180859	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.6204	35.1	-	NFDB01	32	6013	5608	5/17/17	6/15/17	Contig	Huazhong Agricultural University	SAMN05934517	GCA_002146655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/655/GCA_002146655.1_ASM214665v1	-	BGSC 4BG1
Chlamydia trachomatis IU824	1260222	PRJEB223	179054	PVC group	Chlamydiae	1.05053	41.2636	chromosome:NC_020511.1/HF562298.1; plasmid pIU824:NC_020551.1/HF562299.1	-	2	974	905	3/15/13	3/23/17	Chromosome	SOTON	SAMEA2272106	GCA_000348845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/845/GCA_000348845.1_ASM34884v1	23378575	IU824
Burkholderia pseudomallei MSHR1328	1249469	PRJNA178669	178669	Proteobacteria	Betaproteobacteria	7.15449	68.1111	chromosome I:NZ_CM003196.1/CM003196.1; chromosome II:NZ_CM003197.1/CM003197.1	APNR01	2	13318	12659	4/8/15	4/10/17	Chromosome	Los Alamos National Laboratory	SAMN03455786	GCA_000970935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/935/GCA_000970935.1_BBL_NCF	-	MSHR1328
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.69975	67.2	-	MUSD01	130	7434	6891	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001869	GCA_001992075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/075/GCA_001992075.1_ASM199207v1	-	VC7986
Bacteroides fragilis	817	PRJNA254455	254455	FCB group	Bacteroidetes/Chlorobi group	5.46962	43.6	-	JPHP01	157	4757	4446	7/11/14	4/2/17	Contig	Odense University Hospital	SAMN02903957	GCA_000724815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/815/GCA_000724815.1_DCMOUH0085B_1.0	-	DCMOUH0085B
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.98159	50.7	-	NQBC01	87	5263	4874	8/11/17	8/15/17	Contig	JCVI	SAMN07450672	GCA_002247465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/465/GCA_002247465.1_ASM224746v1	-	ECH+11
Legionella pneumophila	446	PRJNA281040	281040	Proteobacteria	Gammaproteobacteria	3.30304	38.2	-	LAXX01	46	3020	2870	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03481694	GCA_001582305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/305/GCA_001582305.1_ASM158230v1	26888563	ATCC 33823
Pseudomonas syringae KCTC 12500	1420587	PRJNA227265	227265	Proteobacteria	Gammaproteobacteria	6.15005	58.9	-	AYTM02	2	5471	5137	12/12/13	3/26/17	Contig	KRIBB	SAMN02404616	GCA_000507185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/507/185/GCA_000507185.2_PSs_v03	-	KCTC 12500
Streptococcus suis YS46	1214204	PRJNA171466	171466	Terrabacteria group	Firmicutes	2.42666	41.2	-	ALMS01	146	2393	2208	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469547	GCA_000441315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/315/GCA_000441315.1_version1	-	YS46
Streptococcus agalactiae GB00909	1154946	PRJNA86565	86565	Terrabacteria group	Firmicutes	2.06678	35	-	ALUM01	22	2124	2012	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991450	GCA_000288415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/415/GCA_000288415.1_ASM28841v1	-	GB00909
Acinetobacter baumannii NIPH 1362	1217642	PRJNA183320	183320	Proteobacteria	Gammaproteobacteria	4.11293	39.2	-	APOR01	8	3973	3811	4/16/13	5/18/17	Scaffold	Broad Institute	SAMN01828180	GCA_000368125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/125/GCA_000368125.1_Acin_baum_NIPH_1362_V1	-	NIPH 1362
Nautilia profundicola AmH	598659	PRJNA32573	32573	Proteobacteria	delta/epsilon subdivisions	1.67644	33.5	chromosome:NC_012115.1/CP001279.1	-	1	1781	1704	2/13/09	4/17/17	Complete Genome	J Craig Venter Institute	SAMN02603431	GCA_000021725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/725/GCA_000021725.1_ASM2172v1	19197347	AmH
Bifidobacterium longum	216816	PRJNA272371	272371	Terrabacteria group	Actinobacteria	1.87256	60.3	-	LSUK01	234	1636	1453	2/29/16	2/29/16	Contig	National University of Singapore	SAMN04497913	GCA_001576955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/955/GCA_001576955.1_ASM157695v1	-	-
Shigella flexneri	623	PRJNA393761	393761	Proteobacteria	Gammaproteobacteria	4.59581	50.5	-	NMXX01	467	5203	4150	8/4/17	8/6/17	Contig	Christian Medical College	SAMN07340962	GCA_002241955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/955/GCA_002241955.1_ASM224195v1	-	FC1170
Bacillus anthracis	1392	PRJDB3562	284187	Terrabacteria group	Firmicutes	5.37514	35.1	-	BBWX01	124	6005	5651	5/15/15	3/26/17	Contig	National Institute of Infectious Diseases	SAMD00026915	GCA_001015005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/005/GCA_001015005.1_ASM101500v1	26089418	44-NIAH
Leptospira interrogans serovar Icterohaemorrhagiae str. Kantorowic	1291353	PRJNA189017	189017	Spirochaetes	Spirochaetia	4.60924	35	-	AOUZ01	149	4116	3742	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920611	GCA_000343305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/305/GCA_000343305.1_CA_glsol164	-	Kantorowic
Streptococcus pyogenes ABC020006309	1438995	PRJNA233214	233214	Terrabacteria group	Firmicutes	1.79375	38.5	-	JJGB01	5	1806	1681	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567563	GCA_000630165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/165/GCA_000630165.1_Stre_pyog_ABC020006309_V1	-	ABC020006309
Neisseria meningitidis	487	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	2.23156	49	-	JURA01	65	2193	2076	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03198048	GCA_001067535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/535/GCA_001067535.1_ASM106753v1	26230489	840_NMEN
Helicobacter pylori	210	PRJDB4296	362565	Proteobacteria	delta/epsilon subdivisions	1.59841	38.8785	chromosome:AP017346.1; plasmid pHPF63:AP017347.1	-	2	1568	1536	1/18/17	1/18/17	Chromosome	"Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture"	SAMD00042476	GCA_002357375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/375/GCA_002357375.1_ASM235737v1	-	F63
Streptococcus pneumoniae CDC3059-06	453365	PRJNA20543	20543	Terrabacteria group	Firmicutes	2.29212	39.9	-	ABGG01	33	2506	2223	10/9/07	3/9/17	Contig	J. Craig Venter Institute	SAMN00000220	GCA_000171695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/695/GCA_000171695.1_ASM17169v1	-	CDC3059-06
Sebaldella termitidis ATCC 33386	526218	PRJNA29539	29539	Fusobacteria	Fusobacteriia	4.48665	33.4235	chromosome:NC_013517.1/CP001739.1; plasmid pSTERM01:NC_013518.1/CP001740.1; plasmid pSTERM02:NC_013519.1/CP001741.1	-	3	4209	4091	11/18/09	5/19/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598468	GCA_000024405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/405/GCA_000024405.1_ASM2440v1	21304705	ATCC 33386
Mycobacterium tuberculosis TRS18	1334064	PRJNA203176	203176	Terrabacteria group	Actinobacteria	4.41153	65.6	chromosome:NZ_CP009185.1/CP009185.1	-	1	4285	4111	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837638	GCA_001998265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/265/GCA_001998265.1_ASM199826v1	27261264	TRS18
Haemophilus influenzae	727	PRJNA350597	350597	Proteobacteria	Gammaproteobacteria	1.77155	37.9	-	MQMJ01	55	1760	1621	12/19/16	3/22/17	Scaffold	The University of Queensland	SAMN05938535	GCA_001908955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/908/955/GCA_001908955.1_ASM190895v1	-	R535
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.21458	69.1	-	BDNF01	287	4961	4699	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076657	GCA_002089315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/315/GCA_002089315.1_ASM208931v1	28045086	IH-068
Lactococcus lactis subsp. cremoris	1359	PRJNA286840	286840	Terrabacteria group	Firmicutes	2.46761	35.5	-	LITF01	212	2504	2210	4/18/16	4/5/17	Contig	Radboudumc	SAMN03770946	GCA_001622375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/375/GCA_001622375.1_ASM162237v1	-	SK110
Bacillus cereus IS075	718220	PRJNA70287	70287	Terrabacteria group	Firmicutes	5.81377	35.3	-	AHCH02	26	6266	5937	8/15/12	3/24/17	Scaffold	Broad Institute	SAMN00768905	GCA_000290935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/935/GCA_000290935.2_Baci_cere_IS075_V2	-	IS075
Staphylococcus epidermidis	1282	PRJNA255947	255947	Terrabacteria group	Firmicutes	2.71159	32	-	JZUN01	44	2776	2579	3/31/15	3/26/17	Contig	Cork Institute of Technology	SAMN03396287	GCA_000966755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/755/GCA_000966755.1_ASM96675v1	25977439	NGS-ED-1111
Candidatus Nitrosopumilus adriaticus	1580092	PRJNA269341	269341	TACK group	Thaumarchaeota	1.80309	33.4	chromosome:NZ_CP011070.1/CP011070.1	-	1	2145	2037	3/19/15	4/10/17	Complete Genome	University of Vienna	SAMN03253153	GCA_000956175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/175/GCA_000956175.1_ASM95617v1	26528837	NF5
Pseudomonas fluorescens	294	PRJNA262953	262953	Proteobacteria	Gammaproteobacteria	6.31814	60.1	-	JRXY01	36	5909	5672	12/17/14	4/2/17	Scaffold	"University of Michigan, Ann Arbor"	SAMN03092898	GCA_000803005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/005/GCA_000803005.1_PfAU14917	25635025	AU14917
Yersinia pestis subsp. microtus	1234659	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.66772	47.5	-	NHNE01	185	4512	4166	6/9/17	6/12/17	Scaffold	SRCAMB	SAMN05521439	GCA_002188835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/835/GCA_002188835.1_ASM218883v1	-	SCPM-O-DNA-14
cyanobacterium endosymbiont of Epithemia turgida isolate EtSB Lake Yunoko	1228987	PRJDB498	256042	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.79432	33.4	chromosome:NZ_AP012549.1/AP012549.1	-	1	1807	1603	7/23/14	4/17/17	Complete Genome	"Department of Biochemistry & Molecular Biology, Dalhousie University"	SAMD00061037	GCA_000829235.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/235/GCA_000829235.1_ASM82923v1	25049384	-
Methanococcus maripaludis C6	444158	PRJNA19639	19639	Euryarchaeota	Methanococci	1.74419	33.4	chromosome:NC_009975.1/CP000867.1	-	1	1881	1816	11/13/07	4/6/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598423	GCA_000018485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/485/GCA_000018485.1_ASM1848v1	-	C6
Geminocystis sp. NIES-3709	1617448	PRJDB3579	278943	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.42606	33.3154	chromosome Unknown:NZ_AP014821.1/AP014821.1; plasmid pGM3709_01:NZ_AP014822.1/AP014822.1; plasmid pGM3709_02:NZ_AP014823.1/AP014823.1; plasmid pGM3709_03:NZ_AP014824.1/AP014824.1; plasmid pGM3709_04:NZ_AP014825.1/AP014825.1; plasmid pGM3709_05:NZ_AP014826.1/AP014826.1; plasmid pGM3709_06:NZ_AP014827.1/AP014827.1; plasmid pGM3709_07:NZ_AP014828.1/AP014828.1; plasmid pGM3709_08:NZ_AP014829.1/AP014829.1; plasmid pGM3709_09:NZ_AP014830.1/AP014830.1; plasmid pGM3709_10:NZ_AP014831.1/AP014831.1; plasmid pGM3709_11:NZ_AP014832.1/AP014832.1	-	12	3820	3587	3/18/15	4/11/17	Complete Genome	Toyohashi University of Technology	SAMD00027151	GCA_001548115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/115/GCA_001548115.1_Gm3709_assembly_1.0	25931605	NIES-3709
candidate division SR1 bacterium Aalborg_AAW-1	1643353	PRJNA280491	280491	unclassified Bacteria	Bacteria candidate phyla	1.04476	33.3	chromosome:CP011268.1	-	1	1035	993	5/15/15	9/21/17	Complete Genome	Aalborg University	SAMN03486750	GCA_001007975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/975/GCA_001007975.1_ASM100797v1	-	-
Acetoanaerobium sticklandii	1511	PRJNA28575	28575	Terrabacteria group	Firmicutes	2.71546	33.3	chromosome:NC_014614.1/FP565809.1	-	1	2591	2487	10/15/10	4/7/17	Complete Genome	Genoscope-CEA	SAMEA3138340	GCA_000196455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/455/GCA_000196455.1_ASM19645v1	-	DSM 519
Methanococcus maripaludis C7	426368	PRJNA18819	18819	Euryarchaeota	Methanococci	1.77269	33.3	chromosome:NC_009637.1/CP000745.1	-	1	1857	1787	6/29/07	4/6/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000031	GCA_000017225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/225/GCA_000017225.1_ASM1722v1	-	C7
Yersinia pestis subsp. microtus bv. Xilingolensis	1679171	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.64268	47.6	-	NHNC01	180	4465	4128	6/9/17	6/12/17	Scaffold	SRCAMB	SAMN05521437	GCA_002188845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/845/GCA_002188845.1_ASM218884v1	-	SCPM-O-DNA-12
Pseudomonas fluorescens	294	PRJNA264639	264639	Proteobacteria	Gammaproteobacteria	5.88423	60	-	JTGG01	50	5297	5163	1/14/15	4/3/17	Scaffold	University of Massachusetts Dartmouth	SAMN03140177	GCA_000817895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/895/GCA_000817895.1_ASM81789v1	25814613	SF39a
Campylobacter fetus subsp. fetus 82-40	360106	PRJNA16293	16293	Proteobacteria	delta/epsilon subdivisions	1.77361	33.3	chromosome:NC_008599.1/CP000487.1	-	1	1780	1710	11/27/06	3/30/17	Complete Genome	TIGR	SAMN02604050	GCA_000015085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/085/GCA_000015085.1_ASM1508v1	-	82-40
Staphylococcus epidermidis	1282	PRJNA255947	255947	Terrabacteria group	Firmicutes	2.62133	31.9	-	JZUO01	48	2643	2465	3/31/15	3/26/17	Contig	Cork Institute of Technology	SAMN03396288	GCA_000966765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/765/GCA_000966765.1_ASM96676v1	25977439	NGS-ED-1117
Bacillus cereus VD022	718223	PRJNA70293	70293	Terrabacteria group	Firmicutes	6.68524	34.8	-	AHCK01	31	7053	6556	8/15/12	6/15/17	Scaffold	Broad Institute	SAMN02596796	GCA_000290955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/955/GCA_000290955.1_Baci_cere_VD022_G8177_V1	-	VD022
Lactococcus lactis subsp. cremoris	1359	PRJNA286840	286840	Terrabacteria group	Firmicutes	2.48569	35.6	-	LITG01	156	2519	2313	4/18/16	4/5/17	Contig	Radboudumc	SAMN03770950	GCA_001622385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/385/GCA_001622385.1_ASM162238v1	-	NCDO763
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.21758	69	-	BDNG01	342	4908	4671	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076658	GCA_002089335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/335/GCA_002089335.1_ASM208933v1	28045086	IH-145
Haemophilus influenzae	727	PRJNA350597	350597	Proteobacteria	Gammaproteobacteria	1.87714	38	-	MQMH01	63	1892	1737	12/19/16	3/28/17	Scaffold	The University of Queensland	SAMN05942090	GCA_001909005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/005/GCA_001909005.1_ASM190900v1	-	1200
Mycobacterium tuberculosis TRS2	1334048	PRJNA203160	203160	Terrabacteria group	Actinobacteria	4.41153	65.4	chromosome:NZ_CP009186.1/CP009186.1	-	1	4316	4073	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837623	GCA_001998365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/365/GCA_001998365.1_ASM199836v1	27261264	TRS2
Staphylococcus saprophyticus	29385	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.57915	33.2599	chromosome:NZ_CP014057.1/CP014057.1; plasmid unnamed:NZ_CP014058.1/CP014058.1	-	2	2530	2343	2/11/16	4/4/17	Complete Genome	US Food and Drug Administration 	SAMN03996280	GCA_001558375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/375/GCA_001558375.1_ASM155837v1	-	FDAARGOS_137
Streptococcus pneumoniae MLV-016	453366	PRJNA20967	20967	Terrabacteria group	Firmicutes	2.24238	39.9	-	ABGH01	126	2362	2079	10/9/07	3/9/17	Contig	J. Craig Venter Institute	SAMN00000218	GCA_000171715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/715/GCA_000171715.1_ASM17171v1	-	MLV-016
Helicobacter pylori	210	PRJDB4296	362565	Proteobacteria	delta/epsilon subdivisions	1.58587	38.766	chromosome:AP017343.1; plasmid pHPF51:AP017344.1	-	2	1552	1520	1/18/17	1/18/17	Chromosome	"Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture"	SAMD00042474	GCA_002357395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/395/GCA_002357395.1_ASM235739v1	-	F51
Neisseria meningitidis	487	PRJNA244802	244802	Proteobacteria	Betaproteobacteria	2.11579	51.6	-	JMCO01	77	2453	2096	7/20/15	3/21/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02729079	GCA_001183095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/095/GCA_001183095.1_Nm220601	25989189	220601
Streptococcus pyogenes ABC020006298	1438994	PRJNA233213	233213	Terrabacteria group	Firmicutes	1.85179	38.6	-	JJGC01	3	1918	1792	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567562	GCA_000630185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/185/GCA_000630185.1_Stre_pyog_ABC020006298_V1	-	ABC020006298
Leptospira interrogans serovar Pomona str. 2006006968	1291360	PRJNA188969	188969	Spirochaetes	Spirochaetia	4.55571	35	-	AOWU01	224	4157	3645	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920609	GCA_000343345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/345/GCA_000343345.1_CA_glsol039	-	2006006968
Bacillus anthracis	1392	PRJDB3563	284188	Terrabacteria group	Firmicutes	5.44982	35.1	-	BBWY01	36	6083	5732	5/15/15	3/26/17	Contig	National Institute of Infectious Diseases	SAMD00026914	GCA_001015025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/025/GCA_001015025.1_ASM101502v1	26089418	52-40-NIAH
Shigella flexneri	623	PRJNA393761	393761	Proteobacteria	Gammaproteobacteria	4.58395	50.5	-	NMXZ01	462	5192	4082	8/4/17	8/6/17	Contig	Christian Medical College	SAMN07340960	GCA_002241965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/965/GCA_002241965.1_ASM224196v1	-	FC3433
Bifidobacterium longum	216816	PRJNA348753	348753	Terrabacteria group	Actinobacteria	1.87849	59.2	-	DCZI01	227	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457477	GCA_002331305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/305/GCA_002331305.1_ASM233130v1	28894102	-
Campylobacter fetus subsp. venerealis str. 84-112	688354	PRJNA41491	41491	Proteobacteria	delta/epsilon subdivisions	1.98803	33.2416	chromosome I:NZ_HG004426.1/HG004426.1; plasmid II:NZ_HG004427.1/HG004427.1	-	2	2039	1940	1/30/14	4/3/17	Complete Genome	Medizinische Universitaet Graz and Karl-Franzens Universitaet Graz	SAMEA3283138	GCA_000967135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/135/GCA_000967135.1_CFV	24416416	84-112
Acinetobacter baumannii NIPH 146	1217639	PRJNA183317	183317	Proteobacteria	Gammaproteobacteria	3.95315	39	-	APOU01	1	3741	3607	4/16/13	3/15/17	Scaffold	Broad Institute	SAMN01828177	GCA_000368185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/185/GCA_000368185.1_Acin_baum_NIPH_146_V1	-	NIPH 146
Streptococcus agalactiae GB00922	1154950	PRJNA86573	86573	Terrabacteria group	Firmicutes	2.11727	35.3	-	ALUP01	17	2194	2090	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991427	GCA_000288435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/435/GCA_000288435.1_ASM28843v1	-	GB00922
Streptococcus suis YS4	1214201	PRJNA171468	171468	Terrabacteria group	Firmicutes	2.1096	41.1	-	ALMU01	64	2146	2013	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469516	GCA_000441335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/335/GCA_000441335.1_version1	-	YS4
Pseudomonas syringae pv. syringae str. B301D-R	1365665	PRJNA212371	212371	Proteobacteria	Gammaproteobacteria	6.03656	59.2	-	JALJ01	81	5469	5150	3/6/14	3/24/17	Contig	"Institute of Plant Biology, University of Zurich"	SAMN02585144	GCA_000585725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/725/GCA_000585725.1_B301D-Rv1.0	24723725	B301D-R
Legionella pneumophila	446	PRJNA281041	281041	Proteobacteria	Gammaproteobacteria	3.26421	38.1	-	LAXY01	41	2976	2838	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03481695	GCA_001582315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/315/GCA_001582315.1_ASM158231v1	26888563	ICDC-LP002
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.82283	50.7	-	NQBD01	102	5065	4725	8/11/17	8/15/17	Contig	JCVI	SAMN07450671	GCA_002247485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/485/GCA_002247485.1_ASM224748v1	-	ECH+12
Bacteroides fragilis	817	PRJEB8297	276427	FCB group	Bacteroidetes/Chlorobi group	4.81151	44.7	-	CDQM01	1025	4520	3419	2/24/15	4/3/17	Contig	CGS-GL	SAMEA3217990	GCA_000944095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/095/GCA_000944095.1_2d2A_assembly	-	2d2A
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.73349	67.1	-	MUSA01	172	7449	6951	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001866	GCA_001992095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/095/GCA_001992095.1_ASM199209v1	-	VC7779
Burkholderia pseudomallei MSHR1079	1249470	PRJNA178670	178670	Proteobacteria	Betaproteobacteria	7.35428	67.9668	chromosome I:NZ_CM003194.1/CM003194.1; chromosome II:NZ_CM003195.1/CM003195.1	APNS01	2	7565	6939	4/7/15	4/10/17	Chromosome	Los Alamos National Laboratory	SAMN03203247	GCA_000970955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/955/GCA_000970955.1_BBM_NCF	-	MSHR1079
Chlamydia trachomatis	813	PRJNA213111	213111	PVC group	Chlamydiae	1.04262	41.3	chromosome:NC_022106.1/CP006672.1	-	1	965	899	8/21/13	3/24/17	Chromosome	Oregon State University	SAMN02189830	GCA_000590595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/595/GCA_000590595.1_ASM59059v1	23842467	F/2-93
Bacillus thuringiensis serovar chanpaisis	180858	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.4812	35.3	-	NFDC01	89	5912	5565	5/17/17	6/15/17	Contig	Huazhong Agricultural University	SAMN05934518	GCA_002146665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/665/GCA_002146665.1_ASM214666v1	-	BGSC 4BH1
Vibrio cholerae HC-62A1	992006	PRJNA64019	64019	Proteobacteria	Gammaproteobacteria	4.03288	47.5	-	AJRV01	105	3829	3684	10/10/12	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00722988	GCA_000305075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/075/GCA_000305075.2_ASM30507v2	-	HC-62A1
Clostridioides difficile CD109	1151281	PRJNA85735	85735	Terrabacteria group	Firmicutes	4.10985	28.4	-	AVHL01	146	3893	3651	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766579	GCA_000449245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/245/GCA_000449245.2_ASM44924v2	-	CD109
Francisella tularensis	263	PRJNA257008	257008	Proteobacteria	Gammaproteobacteria	1.80738	32.2	-	LVKY01	97	1937	1538	8/2/16	4/5/17	Contig	µFORGE	SAMN04260149	GCA_001696945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/945/GCA_001696945.1_FTUL003-SEQ-1-ASM-1	-	O'HARA
Brucella abortus 03-4923-239-D	1341671	PRJNA217064	217064	Proteobacteria	Alphaproteobacteria	3.37113	57.2	-	AXMX01	22	3450	3215	10/24/13	3/24/17	Scaffold	Broad Institute	SAMN02334518	GCA_000480075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/075/GCA_000480075.1_Bruc_abor_03-4923-239-D_V1	-	03-4923-239-D
Xanthomonas citri subsp. citri	611301	PRJEB7202	265980	Proteobacteria	Gammaproteobacteria	5.34333	64.6	-	CDAM01	1459	5327	4201	11/4/14	4/2/17	Contig	CIRAD	SAMEA2827229	GCA_000825585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/585/GCA_000825585.1_XAC3615	-	NCPPB 3615
Xanthomonas oryzae pv. oryzae	64187	PRJNA269430	269430	Proteobacteria	Gammaproteobacteria	4.27592	63.9	-	JXFA01	436	4269	3450	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252528	GCA_001928425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/425/GCA_001928425.1_ASM192842v1	-	DXO-181
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.89064	38	-	MLKW01	359	1920	1678	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297010	GCA_001868045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/045/GCA_001868045.1_ASM186804v1	27118061	AWRIB117
Vibrio parahaemolyticus 10329	745023	PRJNA46533	46533	Proteobacteria	Gammaproteobacteria	5.093	45.3	-	AFBW01	33	4922	4683	4/7/11	5/19/17	Contig	FDA	SAMN02952920	GCA_000195415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/415/GCA_000195415.2_ASM19541v2	21551294	10329
Bacillus subtilis	1423	PRJNA254440	254440	Terrabacteria group	Firmicutes	4.26142	43.6	-	JPNZ01	13	4489	4307	7/28/14	3/24/17	Contig	Guangxi Unversity	SAMN02903909	GCA_000735115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/115/GCA_000735115.1_ASM73511v1	25477413	GXA-28
Lactobacillus salivarius	1624	PRJNA381997	381997	Terrabacteria group	Firmicutes	2.17758	33.2094	chromosome:NZ_CP020858.1/CP020858.1; plasmid unnamed1:NZ_CP020859.1/CP020859.1; plasmid unnamed2:NZ_CP020860.1/CP020860.1	-	3	2177	1953	5/31/17	6/2/17	Complete Genome	Beijing Academy of Agriculture and Forestry Sciences	SAMN06698339	GCA_002162055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/055/GCA_002162055.1_ASM216205v1	-	ZLS006
Clostridium botulinum	1491	PRJNA243331	243331	Terrabacteria group	Firmicutes	4.00513	27.9	-	JSCF01	131	3937	3665	10/27/14	3/24/17	Contig	FDA/CFSAN	SAMN03114998	GCA_000769495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/495/GCA_000769495.1_CFSAN024410_01.0	25502671	CFSAN024410
Enterococcus faecalis EnGen0061	1151188	PRJNA85627	85627	Terrabacteria group	Firmicutes	3.34833	37.1	-	AIIM01	33	3562	3342	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00792319	GCA_000390545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/545/GCA_000390545.1_Ente_faec_B56765_V1	-	B56765
Streptococcus mutans 4VF1	857146	PRJNA49771	49771	Terrabacteria group	Firmicutes	2.00873	36.6	-	AHRQ01	127	1926	1809	2/11/13	3/23/17	Contig	Cornell University	SAMN02429085	GCA_000339215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/215/GCA_000339215.1_ASM33921v1	23228887	4VF1
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14518	52.4	-	CQLP01	81	2516	2202	3/22/15	4/11/17	Contig	SC	SAMEA1690352	GCA_001095685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/685/GCA_001095685.1_8289_2_20	-	GCGS020
Enterococcus faecium FB129-CNAB4	883162	PRJNA52125	52125	Terrabacteria group	Firmicutes	2.72599	37.9	-	AGZB01	9	2754	2583	11/27/12	3/23/17	Scaffold	Broad Institute	SAMN02463889	GCA_000315405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/405/GCA_000315405.1_Ente_dura_FB129-CNAB4_V1	-	FB129-CNAB4
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.67411	66.3	-	JVUZ01	304	4344	4184	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197269	GCA_001069005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/005/GCA_001069005.1_ASM106900v1	26230489	1297_SMAL
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12661	41.2	-	CWDK01	80	2064	1871	6/24/15	3/26/17	Contig	SC	SAMEA1032851	GCA_001176685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/685/GCA_001176685.1_6903_6_8	-	EQUI0153
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.33269	40.3	-	LQFV01	36	2212	2110	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366569	GCA_001930895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/895/GCA_001930895.1_ASM193089v1	-	3347PM
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.86359	46.5	-	JUIR01	731	3023	2397	6/3/16	4/21/17	Contig	Wageningen University	SAMN03196663	GCA_001657235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/235/GCA_001657235.1_ASM165723v1	-	Lrh44
Brucella melitensis bv. 1 str. BCB033	1210449	PRJNA170707	170707	Proteobacteria	Alphaproteobacteria	3.26626	57.3	-	ALOO02	164	3330	3101	8/20/12	3/30/17	Contig	Beijing Institute of Disease Control and Prevention	SAMN02469345	GCA_000292085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/085/GCA_000292085.2_ASM29208v2	-	BCB033
Staphylococcus saprophyticus	29385	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.65014	33.2091	chromosome:NZ_CP014113.1/CP014113.1; plasmid unnamed1:NZ_CP014114.1/CP014114.1; plasmid unnamed2:NZ_CP014115.1/CP014115.1	-	3	2614	2431	2/11/16	4/4/17	Complete Genome	US Food and Drug Administration 	SAMN03996313	GCA_001558275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/275/GCA_001558275.1_ASM155827v1	-	FDAARGOS_168
Corynebacterium diphtheriae bv. mitis	1806053	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.39602	53.6	-	LSVN01	64	2308	2113	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496956	GCA_002202345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/345/GCA_002202345.1_S27	-	74
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.74415	49.3	-	CQDZ01	61	4387	4187	3/23/15	3/26/17	Scaffold	SC	SAMEA980208	GCA_001106265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/265/GCA_001106265.1_5116_3_10	-	YE8850
Serratia marcescens	615	PRJNA243044	243044	Proteobacteria	Gammaproteobacteria	5.07365	60	-	JPOB01	54	4764	4590	7/28/14	3/24/17	Scaffold	University of Pittsburgh	SAMN02712193	GCA_000734475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/734/475/GCA_000734475.1_ASM73447v1	-	YDC563
Lactobacillus plantarum	1590	PRJNA314090	314090	Terrabacteria group	Firmicutes	3.15086	44.5	-	LUWV01	124	3072	2887	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04528819	GCA_001633485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/485/GCA_001633485.1_ASM163348v1	-	Nizo2757
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.6561	31.4	-	CUOY01	14	1712	1619	3/31/15	3/18/17	Contig	SC	SAMEA1010626	GCA_001224645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/645/GCA_001224645.1_7092_1_1	-	OXC6447
Burkholderia sp. AU18528	2015350	PRJNA391085	391085	Proteobacteria	Betaproteobacteria	7.55314	67	-	NKFC01	28	7016	6683	7/20/17	7/22/17	Contig	University of Michigan	SAMN07257385	GCA_002223215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/215/GCA_002223215.1_ASM222321v1	-	AU18528
Propionibacterium acnes P6	1292039	PRJNA188768	188768	Terrabacteria group	Actinobacteria	2.53552	60	-	ARZZ01	32	2544	2400	11/14/13	4/2/17	Contig	Aarhus University	SAMN02469301	GCA_000496915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/915/GCA_000496915.1_P6_assembly2012	24356837	P6
Staphylococcus haemolyticus	1283	PRJNA305004	305004	Terrabacteria group	Firmicutes	2.69547	32.6	-	LRHN01	534	2714	2414	1/22/16	3/27/17	Contig	Institute of Life Sciences	SAMN04316314	GCA_001529425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/425/GCA_001529425.1_ASM152942v1	-	SH1752
Enterobacter cloacae subsp. cloacae	336306	PRJNA285410	285410	Proteobacteria	Gammaproteobacteria	4.96954	55.3	-	LDVV01	367	4951	4636	8/31/15	3/26/17	Contig	University of Queensland	SAMN03753640	GCA_001276425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/425/GCA_001276425.1_ASM127642v1	-	B3
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.41458	57.1	-	FLCU01	66	5510	5213	5/19/16	2/21/17	Scaffold	SC	SAMEA2273525	GCA_900084685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/685/GCA_900084685.1_12045_5_93	-	k223
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.57596	56.8	-	NDXF01	126	4455	4239	4/28/17	5/3/17	Contig	FDA/CFSAN	SAMN06100272	GCA_002114555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/555/GCA_002114555.1_ASM211455v1	-	MOD1-Ls15g
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18911	64.2	-	CSVB01	44	5188	5040	3/24/15	3/18/17	Contig	SC	SAMEA1464875	GCA_001212805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/805/GCA_001212805.1_7396_6_90	-	PAP042
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.59801	67.3	-	LPAH01	136	6973	6582	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449344	GCA_001527925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/925/GCA_001527925.1_ASM152792v1	-	MSMB1596WGS
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	3.8446	38.6	-	MDID01	223	3751	3526	8/25/16	4/5/17	Contig	University of Cologne	SAMN05022863	GCA_001713665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/665/GCA_001713665.1_ASM171366v1	-	UKK-0540
Citrobacter freundii	546	PRJEB20024	386786	Proteobacteria	Gammaproteobacteria	5.44731	51.9	-	FWEK01	271	5470	5093	5/16/17	8/7/17	Scaffold	Kalmar county hospital	SAMEA103915302	GCA_900169625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/625/GCA_900169625.1_15.TR.020_20Carba_OXA-48_KPC	-	-
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.21609	54.6	-	JZYF01	110	5167	4930	3/19/15	3/25/17	Contig	JCVI	SAMN03283682	GCA_000958225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/225/GCA_000958225.1_ASM95822v1	-	42333
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.35427	55	-	LVUE01	146	5404	5006	4/25/16	4/6/17	Contig	JCVI	SAMN04572682	GCA_001631305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/305/GCA_001631305.1_ASM163130v1	-	GN05439
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.56329	63.9	-	FVMI01	26	5731	5519	3/10/17	3/18/17	Scaffold	SC	SAMEA2275731	GCA_900136205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/205/GCA_900136205.1_12163_1_77	-	1005
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.50437	66.7	-	LPKL01	89	7953	7604	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449618	GCA_001532955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/955/GCA_001532955.1_ASM153295v1	-	MSMB648WGS
Pseudomonas sp. HMSC067G02	1739418	PRJNA300068	300068	Proteobacteria	Gammaproteobacteria	6.60329	66.3	-	LTWO01	126	6358	6136	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480340	GCA_001813485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/485/GCA_001813485.1_ASM181348v1	-	HMSC067G02
Streptomyces sp. NRRL S-1896	1463893	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.7711	71.7	-	JOIV01	939	9709	8885	7/15/14	3/11/17	Scaffold	University of Illinois	SAMN02645516	GCA_000725655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/655/GCA_000725655.1_Doro.v1.0	-	NRRL S-1896
Bacillus sp. SJS	1423321	PRJNA235995	235995	Terrabacteria group	Firmicutes	4.14808	43.3	-	JAQV02	36	4217	4098	7/22/14	4/12/17	Contig	GCAT-SEEK	SAMN02593515	GCA_000732485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/485/GCA_000732485.2_ASM73248v2	-	SJS
Acinetobacter sp. 1294596	1310603	PRJNA194679	194679	Proteobacteria	Gammaproteobacteria	3.34916	41.4	-	JFCC01	155	3247	2963	2/27/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02371036	GCA_000582925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/925/GCA_000582925.1_ASM58292v1	-	1294596
Sphingomonas sp. S6-262	1166340	PRJEB16900	351054	Proteobacteria	Alphaproteobacteria	3.84797	67	-	FOCF01	20	3668	3525	10/29/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05192583	GCA_900110035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/035/GCA_900110035.1_IMG-taxon_2654588200_annotated_assembly	-	S6-262
Clostridium sp. CAG:149	1262776	PRJEB724	206645	Terrabacteria group	Firmicutes	3.01905	50.4	-	CAYX01	153	2635	2596	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138508	GCA_000432415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/415/GCA_000432415.1_MGS149	-	-
Rhodococcus sp. 05-2254-5	2022511	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.7439	64.5	-	NOZG01	35	5425	5303	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376381	GCA_002258575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/575/GCA_002258575.1_ASM225857v1	-	05-2254-5
Enterobacter sp. GN02600	1659714	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.4573	51.7	-	LEDM01	126	5417	5109	6/9/15	4/10/17	Contig	JCVI	SAMN03732718	GCA_001022685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/685/GCA_001022685.1_ASM102268v1	-	GN02600
Staphylococcus sp. HMSC58B01	1795299	PRJNA311149	311149	Terrabacteria group	Firmicutes	2.73819	32.7	-	LTNH01	85	2833	2707	10/17/16	4/13/17	Scaffold	Washington University	SAMN04498905	GCA_001815835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/835/GCA_001815835.1_ASM181583v1	-	HMSC58B01
Corynebacterium sp. HMSC074A01	1715030	PRJNA296157	296157	Terrabacteria group	Actinobacteria	2.54944	64.5	-	MLJM01	40	2360	2233	10/24/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04495804	GCA_001831515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/515/GCA_001831515.1_ASM183151v1	-	HMSC074A01
Streptococcus sp. HMSC068F04	1715051	PRJNA296178	296178	Terrabacteria group	Firmicutes	2.17991	39.6	-	LTPD01	90	2040	1916	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498582	GCA_001837455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/455/GCA_001837455.1_ASM183745v1	-	HMSC068F04
Mycobacterium sp. E2978	1834139	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.6564	69.4	-	LZIT01	356	5470	5053	6/17/16	4/13/17	Contig	JCVI	SAMN04634210	GCA_001666815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/815/GCA_001666815.1_ASM166681v1	-	E2978
Prevotella sp. UBA634	1947178	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.93185	50.2	-	DBOY01	228	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452407	GCA_002299705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/705/GCA_002299705.1_ASM229970v1	28894102	-
Paenibacillus sp. GP183	1882751	PRJEB16406	349416	Terrabacteria group	Firmicutes	5.83099	45.3	-	FNSW01	3	5725	5435	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443246	GCA_900104695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/695/GCA_900104695.1_IMG-taxon_2690316367_annotated_assembly	-	GP183
Prochlorococcus sp. scB243_498I20	1471493	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.58986	31.3	-	JFMR01	167	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671364	GCA_000635015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/015/GCA_000635015.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. P0132	1895608	PRJNA341026	341026	Proteobacteria	delta/epsilon subdivisions	1.59582	33.5	-	MJKM01	17	1667	1585	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687046	GCA_002139625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/625/GCA_002139625.1_ASM213962v1	28854596	P0132
Rhizobium sp. Root1334	1736456	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	6.31081	59.4	-	LMEY01	32	6020	5801	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155725	GCA_001426665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/665/GCA_001426665.1_Root1334	26633631	Root1334
Mesorhizobium sp. WSM3862	632858	PRJNA399611	399611	Proteobacteria	Alphaproteobacteria	6.18418	63.4	-	NSGE01	29	6101	5735	9/12/17	9/14/17	Contig	Curtin University	SAMN07540840	GCA_002294985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/985/GCA_002294985.1_ASM229498v1	-	WSM3862
Microbacterium sp. 71-36	1895788	PRJNA279279	279279	Terrabacteria group	Actinobacteria	3.51742	70.7	-	MKTP01	10	3326	3244	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660558	GCA_001898305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/305/GCA_001898305.1_ASM189830v1	-	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.80197	57	-	FXRV01	98	5882	5505	4/28/17	5/6/17	Scaffold	SC	SAMEA2609538	GCA_900181995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/995/GCA_900181995.1_14936_2_56	-	3189STDY5864909
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.7527	32.3	-	FQMS01	22	2719	2549	11/24/16	4/6/17	Scaffold	SC	SAMEA3449136	GCA_900127025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/025/GCA_900127025.1_17175_3_80	-	3688STDY6125134
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.78534	32.3	-	FQRG01	25	2795	2620	11/25/16	4/6/17	Scaffold	SC	SAMEA3449090	GCA_900128215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/215/GCA_900128215.1_17175_3_34	-	3688STDY6125082
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.80631	57	-	FXSC01	112	5881	5506	4/28/17	5/6/17	Scaffold	SC	SAMEA2609543	GCA_900182005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/182/005/GCA_900182005.1_14936_2_58	-	3189STDY5864911
Microbacterium sp. 70-16	1895785	PRJNA279279	279279	Terrabacteria group	Actinobacteria	3.12946	69.6	-	MKTQ01	29	2885	2776	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660559	GCA_001898315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/315/GCA_001898315.1_ASM189831v1	-	-
Mesorhizobium sp. WSM3860	2029403	PRJNA399611	399611	Proteobacteria	Alphaproteobacteria	6.37278	63.3	-	NSGF01	52	6243	5899	9/12/17	9/14/17	Contig	Curtin University	SAMN07540839	GCA_002294995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/995/GCA_002294995.1_ASM229499v1	-	WSM3860
Rhizobium sp. Root483D2	1736545	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	6.04295	60	-	LMFB01	44	5796	5622	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155814	GCA_001426685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/685/GCA_001426685.1_Root483D2	26633631	Root483D2
Campylobacter sp. P0139	1895613	PRJNA341031	341031	Proteobacteria	delta/epsilon subdivisions	1.65814	33.6	-	MJKR01	24	1728	1641	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687051	GCA_002139655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/655/GCA_002139655.1_ASM213965v1	28854596	P0139
Prochlorococcus sp. scB245a_518A6	1471502	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.3727	31.4	-	JFNA01	278	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671373	GCA_000635055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/055/GCA_000635055.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Paenibacillus sp. CF384	1884382	PRJEB16570	349890	Terrabacteria group	Firmicutes	6.98818	50.1	-	FNNV01	51	6214	6058	10/22/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05518855	GCA_900106745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/745/GCA_900106745.1_IMG-taxon_2690315634_annotated_assembly	-	CF384
Prevotella sp. UBA631	1947175	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.9472	49.4	-	DBPB01	182	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455721	GCA_002299715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/299/715/GCA_002299715.1_ASM229971v1	28894102	-
Mycobacterium sp. E3251	1834144	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.61932	67.7	-	LZJF01	205	5397	5109	6/17/16	4/12/17	Contig	JCVI	SAMN04634235	GCA_001666835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/835/GCA_001666835.1_ASM166683v1	-	E3251
Streptococcus sp. HMSC072G02	1715119	PRJNA296247	296247	Terrabacteria group	Firmicutes	2.07253	35.2	-	LTOP01	43	2110	2018	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498620	GCA_001837765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/765/GCA_001837765.1_ASM183776v1	-	HMSC072G02
Corynebacterium sp. HMSC034B08	1715135	PRJNA296263	296263	Terrabacteria group	Actinobacteria	2.51913	61.6	-	LTSB01	101	2442	2226	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498630	GCA_001835805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/805/GCA_001835805.1_ASM183580v1	-	HMSC034B08
Staphylococcus sp. HMSC034A07	1715131	PRJNA296259	296259	Terrabacteria group	Firmicutes	2.43151	32	-	LTSE01	75	2391	2282	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498627	GCA_001835815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/815/GCA_001835815.1_ASM183581v1	-	HMSC034A07
Enterobacter cloacae complex sp. GN02692	1870948	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.45216	55.7	-	LEDI01	111	5410	5163	6/9/15	4/20/17	Contig	JCVI	SAMN03732722	GCA_001022755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/755/GCA_001022755.1_ASM102275v1	-	GN02692
Rhodococcus sp. 05-2254-1	2022502	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.92528	64.5	-	NOZK01	35	5620	5497	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376372	GCA_002258625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/625/GCA_002258625.1_ASM225862v1	-	05-2254-1
Clostridium sp. CAG:127	1262774	PRJEB706	206588	Terrabacteria group	Firmicutes	2.74406	44.1	-	CAZJ01	52	2489	2463	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138511	GCA_000432475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/475/GCA_000432475.1_MGS127	-	-
Sphingomonas sp. S5-249	1166337	PRJEB17306	351523	Proteobacteria	Alphaproteobacteria	4.06057	68.5	-	FOZG01	6	3830	3732	11/1/16	8/3/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05192580	GCA_900113315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/315/GCA_900113315.1_IMG-taxon_2654588199_annotated_assembly	-	S5-249
Acinetobacter sp. 263903-2	1310834	PRJNA194910	194910	Proteobacteria	Gammaproteobacteria	4.13455	38.8	-	JFDA01	90	4093	3766	2/28/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02567752	GCA_000583395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/395/GCA_000583395.1_ASM58339v1	-	263903-2
Bacillus sp. 72	1131816	PRJNA223102	223102	Terrabacteria group	Firmicutes	3.90875	40.8	-	JQMI01	26	4065	3737	8/28/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02746017	GCA_000744645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/645/GCA_000744645.1_ASM74464v1	-	72
Streptomyces sp. NRRL S-623	1463916	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.71787	71.6	-	JOJC01	73	6796	6534	7/15/14	3/11/17	Scaffold	University of Illinois	SAMN02645523	GCA_000725705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/705/GCA_000725705.1_Doro.v1.0	-	NRRL S-623
Pseudomonas sp. HMSC063H08	1739428	PRJNA300078	300078	Proteobacteria	Gammaproteobacteria	7.05264	65.9	-	LTWH01	323	6836	6504	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480363	GCA_001813645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/645/GCA_001813645.1_ASM181364v1	-	HMSC063H08
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.60644	66.7	-	LPIE01	95	7985	7607	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449556	GCA_001533295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/295/GCA_001533295.1_ASM153329v1	-	MSMB1228WGS
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.19353	64.1	-	FVMO01	52	5232	5038	3/10/17	3/18/17	Scaffold	SC	SAMEA2275734	GCA_900136235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/235/GCA_900136235.1_12163_1_79	-	1008
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.35422	55	-	LVUW01	78	5321	5042	4/25/16	4/6/17	Contig	JCVI	SAMN04572698	GCA_001631315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/315/GCA_001631315.1_ASM163131v1	-	GN05979
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.00876	55.2	-	JZYB01	71	4983	4731	3/19/15	3/25/17	Contig	JCVI	SAMN03283651	GCA_000958245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/245/GCA_000958245.1_ASM95824v1	-	43555
Citrobacter freundii	546	PRJEB20024	386786	Proteobacteria	Gammaproteobacteria	5.50518	51.8	-	FWDQ01	324	5536	5135	5/16/17	8/7/17	Scaffold	Kalmar county hospital	SAMEA103915301	GCA_900169695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/695/GCA_900169695.1_15.TR.020_20OXA_OXA-48_KPC	-	-
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	4.02711	38.7	-	MDIJ01	142	3952	3767	8/25/16	4/5/17	Contig	University of Cologne	SAMN05022869	GCA_001713675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/675/GCA_001713675.1_ASM171367v1	-	UKK-0546
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.88768	67.1	-	LPAI01	132	7253	6838	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449345	GCA_001527945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/945/GCA_001527945.1_ASM152794v1	-	MSMB1598WGS
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.83785	64.1	-	CSUF01	47	4871	4721	3/24/15	3/18/17	Contig	SC	SAMEA1464923	GCA_001212825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/825/GCA_001212825.1_7396_6_66	-	PAP018
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.50467	56.8	-	NHTW01	22	4368	4165	6/5/17	6/7/17	Contig	FDA/CFSAN	SAMN07163230	GCA_002166885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/885/GCA_002166885.1_ASM216688v1	-	GP1999
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.52265	57.1	-	FLDT01	64	5621	5345	5/19/16	2/21/17	Scaffold	SC	SAMEA2273583	GCA_900084925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/925/GCA_900084925.1_12045_6_51	-	k684
Enterobacter cloacae subsp. cloacae	336306	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.28822	54.7	-	LJDV01	340	5308	4909	10/15/15	3/26/17	Contig	University of KwaZulu Natal	SAMN04011429	GCA_001316615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/615/GCA_001316615.1_ASM131661v1	-	ST108:941726609
Staphylococcus haemolyticus	1283	PRJNA304997	304997	Terrabacteria group	Firmicutes	2.38466	32.6	-	LRBM01	108	2355	2231	1/22/16	3/27/17	Contig	Institute of Life Sciences	SAMN04313475	GCA_001529445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/445/GCA_001529445.1_ASM152944v1	26988040	SH1574
Cutibacterium acnes	1747	PRJNA247997	247997	Terrabacteria group	Actinobacteria	2.49795	60	-	JNHT01	55	2520	2363	7/17/14	4/2/17	Contig	"University of California, Los Angeles"	SAMN02782304	GCA_000730465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/465/GCA_000730465.1_ASM73046v1	25125638	HL411PA1
Burkholderia sp. AU17457	2015349	PRJNA391085	391085	Proteobacteria	Betaproteobacteria	7.61807	66.9	-	NKFB01	22	7071	6735	7/20/17	7/22/17	Contig	University of Michigan	SAMN07257384	GCA_002223255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/255/GCA_002223255.1_ASM222325v1	-	AU17457
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66472	31.4	-	CURT01	21	1717	1621	3/31/15	3/18/17	Contig	SC	SAMEA1010508	GCA_001225085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/085/GCA_001225085.1_7092_1_76	-	OXC6523
Lactobacillus plantarum	1590	PRJNA314092	314092	Terrabacteria group	Firmicutes	3.16906	44.4	-	LUWW01	90	3125	2905	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04528820	GCA_001633495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/495/GCA_001633495.1_ASM163349v1	-	Nizo2766
Serratia marcescens	615	PRJEB6931	258146	Proteobacteria	Gammaproteobacteria	5.10099	59.8	-	CCNF01	66	4893	4693	9/5/14	3/24/17	Scaffold	UB	SAMEA2687580	GCA_000751195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/195/GCA_000751195.1_Serratia_assembly	-	-
Yersinia enterocolitica	630	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	4.40911	47	-	CPWT01	112	4135	3870	3/22/15	3/26/17	Scaffold	SC	SAMEA1486395	GCA_001107025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/025/GCA_001107025.1_8016_2_72	-	IP22276
Corynebacterium diphtheriae bv. mitis	1806053	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.41957	53.5	-	LSVQ01	74	2341	2163	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496960	GCA_002202415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/415/GCA_002202415.1_S31	-	645
Candidatus Nitrosopelagicus brevis	1410606	PRJNA223412	223412	TACK group	Thaumarchaeota	1.23213	33.2	chromosome:NZ_CP007026.1/CP007026.1	-	1	1467	1412	12/31/14	4/10/17	Complete Genome	J. Craig Venter Institute	SAMN03273964	GCA_000812185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/185/GCA_000812185.1_ASM81218v1	25587132	CN25
Brucella melitensis bv. 1 str. BCB028	1210447	PRJNA170705	170705	Proteobacteria	Alphaproteobacteria	3.2864	57.3	-	ALOM02	127	3341	3124	8/20/12	3/30/17	Contig	Beijing Institute of Disease Control and Prevention	SAMN02469337	GCA_000292165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/165/GCA_000292165.2_ASM29216v2	-	BCB028
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.8635	46.5	-	JUIQ01	566	3014	2428	6/3/16	4/10/17	Contig	Wageningen University	SAMN03196662	GCA_001657255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/255/GCA_001657255.1_ASM165725v1	-	Lrh43
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.29229	40.3	-	LQFY01	30	2157	2056	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366572	GCA_001930925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/925/GCA_001930925.1_ASM193092v1	-	3384PM
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15516	41.1	-	CVXO01	71	2121	1926	6/24/15	3/26/17	Contig	SC	SAMEA1032855	GCA_001176705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/705/GCA_001176705.1_6817_1_58	-	EQUI0011
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.84743	66.4	-	JWBH01	235	4545	4377	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197105	GCA_001069295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/295/GCA_001069295.1_ASM106929v1	26230489	1149_SMAL
Enterococcus faecium EnGen0005	1138880	PRJNA82411	82411	Terrabacteria group	Firmicutes	2.71977	38.6	-	AHWH01	13	2686	2425	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779800	GCA_000321465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/465/GCA_000321465.1_Ente_faec_E0045_V1	-	E0045
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14301	52.4	-	CQKE01	85	2500	2186	3/23/15	4/11/17	Contig	SC	SAMEA1690396	GCA_001096365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/365/GCA_001096365.1_8289_2_25	-	GCGS025
Streptococcus mutans 15VF2	857145	PRJNA49773	49773	Terrabacteria group	Firmicutes	2.02167	36.6	-	AHRR01	117	1931	1831	2/11/13	3/23/17	Contig	Cornell University	SAMN02429086	GCA_000339235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/235/GCA_000339235.1_ASM33923v1	23228887	15VF2
Enterococcus faecalis EnGen0064	1151189	PRJNA85629	85629	Terrabacteria group	Firmicutes	3.4091	37.5	-	AIIN01	14	3569	3343	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00792320	GCA_000390565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/565/GCA_000390565.1_Ente_faec_B69486_V1	-	B69486
Clostridium botulinum	1491	PRJNA272578	272578	Terrabacteria group	Firmicutes	3.79209	27.4	-	JXMR01	4	3434	3246	1/26/15	3/25/17	Contig	KULeuven	SAMN03283906	GCA_000828305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/305/GCA_000828305.1_ASM82830v1	25767228	NCTC 11219
Halanaerobium hydrogeniformans	656519	PRJNA43059	43059	Terrabacteria group	Firmicutes	2.61312	33.2	chromosome:NC_014654.1/CP002304.1	-	1	2441	2311	11/12/10	9/3/17	Complete Genome	US DOE Joint Genome Institute	SAMN02232026	GCA_000166415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/415/GCA_000166415.1_ASM16641v1	21602336	-
Bacillus subtilis subsp. subtilis	135461	PRJNA254215	254215	Terrabacteria group	Firmicutes	4.05998	43.7	-	JPVW01	10	4213	4091	8/15/14	3/24/17	Contig	INRA - MICALIS	SAMN02902142	GCA_000740475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/475/GCA_000740475.1_ASM74047v1	25291767	NDmed
Vibrio parahaemolyticus SNUVpS-1	1234128	PRJNA175762	175762	Proteobacteria	Gammaproteobacteria	5.24184	45.2	-	AMRZ01	60	5005	4817	11/26/12	5/19/17	Contig	Seoul National University	SAMN02470919	GCA_000315135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/135/GCA_000315135.1_De_novo	23405312	SNUVpS-1
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.01402	38	-	MLKX01	542	2071	1776	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297011	GCA_001868055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/055/GCA_001868055.1_ASM186805v1	27118061	AWRIB118
Xanthomonas oryzae pv. oryzae	64187	PRJNA269431	269431	Proteobacteria	Gammaproteobacteria	4.24818	64	-	JXFB01	459	4184	3410	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252517	GCA_001928445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/445/GCA_001928445.1_ASM192844v1	-	DXO-200
Xanthomonas citri subsp. citri	611301	PRJEB7203	265981	Proteobacteria	Gammaproteobacteria	5.21002	64.6	-	CDAP01	1479	5162	4079	11/4/14	4/3/17	Contig	CIRAD	SAMEA2827226	GCA_000825605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/605/GCA_000825605.1_XACS582	-	JS582
Brucella abortus 2308	359391	PRJNA243871	243871	Proteobacteria	Alphaproteobacteria	3.27079	57.2	-	JMRZ01	1	3373	3153	8/19/14	3/24/17	Scaffold	Los Alamos National Laboratory	SAMN02767381	GCA_000742195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/195/GCA_000742195.1_ASM74219v1	25237024	2308
Francisella tularensis	263	PRJNA257008	257008	Proteobacteria	Gammaproteobacteria	1.78457	32.2	-	LVKZ01	132	1849	1538	8/2/16	4/5/17	Contig	µFORGE	SAMN04260150	GCA_001696955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/955/GCA_001696955.1_FTUL002-SEQ-1-ASM-1	-	MAX
Clostridioides difficile DA00273	1151357	PRJNA85889	85889	Terrabacteria group	Firmicutes	4.09598	28.4	-	AVKF01	271	3828	3631	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766674	GCA_000449265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/265/GCA_000449265.2_ASM44926v2	-	DA00273
Vibrio cholerae HC-77A1	991987	PRJNA63981	63981	Proteobacteria	Gammaproteobacteria	4.04013	47.5	-	AJRW01	112	3827	3679	10/10/12	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00722981	GCA_000305095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/095/GCA_000305095.2_ASM30509v2	-	HC-77A1
Bacillus thuringiensis serovar wratislaviensis	180878	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.98162	35.1	-	NFDD01	52	6240	5814	5/17/17	6/15/17	Contig	Huazhong Agricultural University	SAMN05934519	GCA_002146695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/695/GCA_002146695.1_ASM214669v1	-	BGSC 4BJ1
Chlamydia trachomatis	813	PRJNA213111	213111	PVC group	Chlamydiae	1.04301	41.3	chromosome:NC_022108.1/CP006675.1	-	1	966	894	8/21/13	3/24/17	Chromosome	Oregon State University	SAMN02189833	GCA_000590655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/655/GCA_000590655.1_ASM59065v1	23842467	E/12-94
Burkholderia pseudomallei	28450	PRJNA339871	339871	Proteobacteria	Betaproteobacteria	7.28581	68.1347	chromosome 2:NZ_CM007659.1/CM007659.1	MECZ01	3	7557	6953	1/27/17	4/10/17	Chromosome	Menzies School of Health Research	SAMN05607055	GCA_001974745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/974/745/GCA_001974745.1_ASM197474v1	-	MSHR6522
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.05361	67	-	MUSC01	151	7749	7202	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001868	GCA_001992115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/115/GCA_001992115.1_ASM199211v1	-	VC7985
Bacteroides fragilis	817	PRJNA267549	267549	FCB group	Bacteroidetes/Chlorobi group	5.50083	43.7	-	JVLR01	150	4904	4648	7/10/15	4/3/17	Contig	University of Washington	SAMN03197511	GCA_001054865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/865/GCA_001054865.1_ASM105486v1	26230489	320_BFRA
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.25003	50.7	-	NQBI01	165	5469	5034	8/11/17	8/15/17	Contig	JCVI	SAMN07450666	GCA_002247505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/505/GCA_002247505.1_ASM224750v1	-	ECH+17
Legionella pneumophila	446	PRJNA281043	281043	Proteobacteria	Gammaproteobacteria	3.64534	38.2	-	LAXZ01	43	3332	3182	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03481705	GCA_001582325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/325/GCA_001582325.1_ASM158232v1	26888563	Qin1
Pseudomonas syringae DSM 10604	1449349	PRJNA235155	235155	Proteobacteria	Gammaproteobacteria	6.07245	59	-	JALK01	84	5427	5112	2/25/14	3/24/17	Contig	Institute of Microbial Technology	SAMN02952971	GCA_000597765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/765/GCA_000597765.1_PSSRIMT-15J14	-	DSM 10604
Streptococcus suis YS50	1214206	PRJNA171469	171469	Terrabacteria group	Firmicutes	2.41721	41.3	-	ALMV01	122	2423	2245	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469519	GCA_000441355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/355/GCA_000441355.1_version1	-	YS50
Streptococcus agalactiae GB00914	1154948	PRJNA86569	86569	Terrabacteria group	Firmicutes	2.04179	35.2	-	ALUO01	25	2095	1990	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991426	GCA_000288455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/455/GCA_000288455.1_ASM28845v1	-	GB00914
Acinetobacter baumannii NIPH 615	1217641	PRJNA183316	183316	Proteobacteria	Gammaproteobacteria	3.97385	39.1	-	APOV01	12	3820	3561	4/16/13	3/15/17	Scaffold	Broad Institute	SAMN01828176	GCA_000368205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/205/GCA_000368205.1_Acin_baum_NIPH_615_V1	-	NIPH 615
Baumannia cicadellinicola str. Hc (Homalodisca coagulata)	374463	PRJNA12513	12513	Proteobacteria	Gammaproteobacteria	0.686194	33.2	chromosome:NC_007984.1/CP000238.1	-	1	651	595	4/27/06	4/6/17	Complete Genome	TIGR	SAMN02604023	GCA_000013185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/185/GCA_000013185.1_ASM1318v1	16729848	Hc (Homalodisca coagulata)
Shigella flexneri	623	PRJNA393761	393761	Proteobacteria	Gammaproteobacteria	4.52057	50.5	-	NMXQ01	515	5126	4041	8/4/17	8/6/17	Contig	Christian Medical College	SAMN07340970	GCA_002241975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/975/GCA_002241975.1_ASM224197v1	-	FC401
Bacillus anthracis	1392	PRJNA285407	285407	Terrabacteria group	Firmicutes	5.67792	34.9	-	LDPG01	62	6133	5788	6/19/15	3/26/17	Contig	Rochester Institute of Technology	SAMN03753508	GCA_001029875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/875/GCA_001029875.1_RIT_375_V1	26227604	RIT375
Leptospira interrogans serovar Manilae str. UP-OM	1291362	PRJNA189021	189021	Spirochaetes	Spirochaetia	4.65752	35	-	AOUV01	145	4225	3791	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920112	GCA_000343375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/375/GCA_000343375.1_CA_glsol183	-	UP-OM
Streptococcus pyogenes ABC020005405	1438988	PRJNA233212	233212	Terrabacteria group	Firmicutes	1.84959	38.6	-	JJGD01	5	1867	1735	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567561	GCA_000630205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/205/GCA_000630205.1_Stre_pyog_ABC020005405_V1	-	ABC020005405
Neisseria meningitidis	487	PRJNA244812	244812	Proteobacteria	Betaproteobacteria	2.11964	51.6	-	JMCU01	83	2480	2076	7/20/15	3/21/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02729094	GCA_001183125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/125/GCA_001183125.1_Nm440902	25989189	440902
Helicobacter pylori	210	PRJDB4296	362565	Proteobacteria	delta/epsilon subdivisions	1.65696	38.5638	chromosome:AP017352.1; plasmid pHPF78:AP017353.1	-	2	1636	1607	1/18/17	1/18/17	Chromosome	"Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture"	SAMD00042481	GCA_002357415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/415/GCA_002357415.1_ASM235741v1	-	F78
Streptococcus pneumoniae BS458	512769	PRJNA29069	29069	Terrabacteria group	Firmicutes	2.06373	39.5	-	ABWA01	109	2250	2043	8/12/10	3/9/17	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393765	GCA_000173175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/175/GCA_000173175.1_ASM17317v1	-	BS458
Campylobacter fetus subsp. venerealis 97/608	1093099	PRJNA73807	73807	Proteobacteria	delta/epsilon subdivisions	2.00042	33.1912	chromosome:NZ_CP008810.1/CP008810.1; plasmid pCFV97608-1:NZ_CP008811.1/CP008811.1; plasmid pCFV97608-2:NZ_CP008812.1/CP008812.1	-	3	2055	1953	9/29/14	4/2/17	Complete Genome	Utrecht University and USDA	SAMN02870596	GCA_000759515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/515/GCA_000759515.1_ASM75951v1	25232170	97/608
Mycobacterium tuberculosis TRS6	1334052	PRJNA203164	203164	Terrabacteria group	Actinobacteria	4.41153	65.4	chromosome:NZ_CP009188.1/CP009188.1	-	1	4321	4084	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837626	GCA_001998425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/425/GCA_001998425.1_ASM199842v1	27261264	TRS6
Haemophilus influenzae	727	PRJNA350597	350597	Proteobacteria	Gammaproteobacteria	1.84763	37.9	-	MQMI01	51	1869	1720	12/19/16	3/28/17	Scaffold	The University of Queensland	SAMN05942198	GCA_001909015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/015/GCA_001909015.1_ASM190901v1	-	C188
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.21142	69	-	BDNH01	366	5009	4651	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076659	GCA_002089355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/355/GCA_002089355.1_ASM208935v1	28045086	IH-149
Lactococcus lactis subsp. cremoris	1359	PRJNA286840	286840	Terrabacteria group	Firmicutes	2.48157	35.5	-	LITE01	255	2538	2216	4/18/16	4/5/17	Contig	Radboudumc	SAMN03770945	GCA_001622405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/405/GCA_001622405.1_ASM162240v1	-	AM2
Bacillus cereus VD142	718224	PRJNA70295	70295	Terrabacteria group	Firmicutes	5.92391	35.2	-	AHCL02	20	6052	5653	8/15/12	3/24/17	Scaffold	Broad Institute	SAMN02596797	GCA_000290975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/975/GCA_000290975.2_Baci_cere_VD142_V2	-	VD142
Staphylococcus epidermidis	1282	PRJNA255947	255947	Terrabacteria group	Firmicutes	2.62105	31.9	-	JZUP01	48	2646	2459	3/31/15	3/26/17	Contig	Cork Institute of Technology	SAMN03396289	GCA_000966775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/775/GCA_000966775.1_ASM96677v1	25977439	NGS-ED-1118
Staphylococcus sp. AntiMn-1	1715860	PRJNA295542	295542	Terrabacteria group	Firmicutes	2.7384	33.1801	chromosome:NZ_CP012968.1/CP012968.1; plasmid AM1_232:NZ_CP013300.1/CP013300.1	-	2	2665	2435	6/16/16	4/12/17	Complete Genome	Zhejiang Wanli University	SAMN04075658	GCA_001663395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/395/GCA_001663395.1_ASM166339v1	-	AntiMn-1
Pseudomonas fluorescens	294	PRJNA276809	276809	Proteobacteria	Gammaproteobacteria	6.68033	60.5	-	LACF01	76	6077	5916	4/1/15	4/3/17	Scaffold	University of Copenhagen	SAMN03381180	GCA_000967935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/935/GCA_000967935.1_ASM96793v1	-	H21
Yersinia pestis subsp. microtus	1234659	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.59054	47.5	-	NHND01	197	4463	4134	6/9/17	6/12/17	Scaffold	SRCAMB	SAMN05521438	GCA_002188855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/855/GCA_002188855.1_ASM218885v1	-	SCPM-O-DNA-13
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305	342451	PRJNA15596	15596	Terrabacteria group	Firmicutes	2.5779	33.1473	chromosome:NC_007350.1/AP008934.1; plasmid pSSP1:NC_007351.1/AP008935.1; plasmid pSSP2:NC_007352.1/AP008936.1	-	3	2523	2351	8/11/05	3/29/17	Complete Genome	"Kitasato Institute for Life Sciences, Japan"	SAMD00061076	GCA_000010125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/125/GCA_000010125.1_ASM1012v1	16135568	ATCC 15305
Campylobacter fetus subsp. fetus 04/554	1240980	PRJNA177180	177180	Proteobacteria	delta/epsilon subdivisions	1.82663	33.1405	chromosome:NZ_CP008808.1/CP008808.1; plasmid pCFF04554:NZ_CP008809.1/CP008809.1	-	2	1862	1742	9/29/14	4/2/17	Complete Genome	Utrecht University	SAMN02870597	GCA_000759485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/485/GCA_000759485.1_ASM75948v1	25232170	04/554
Staphylococcus saprophyticus	29385	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.63557	33.1398	chromosome:CP022056.1; plasmid unnamed1:CP022055.1; plasmid unnamed2:CP022057.1	-	3	2589	2303	6/27/17	6/27/17	Complete Genome	US Food and Drug Administration 	SAMN06173349	GCA_002208905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/905/GCA_002208905.1_ASM220890v1	-	FDAARGOS_336
Campylobacter fetus subsp. venerealis cfvi03/293	1273266	PRJNA183998	183998	Proteobacteria	delta/epsilon subdivisions	1.99673	33.1124	chromosome:NZ_CP006999.2/CP006999.2; plasmid pCfviMP1:NZ_CP007000.1/CP007000.1; plasmid pCfviMP2:NZ_CP007001.1/CP007001.1; plasmid pCfviP3:NZ_CP007002.1/CP007002.1	-	4	2043	1945	1/3/14	4/5/17	Complete Genome	Utrecht University	SAMN02641386	GCA_000512745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/745/GCA_000512745.2_ASM51274v2	24503995	cfvi03/293
Staphylococcus saprophyticus	29385	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.63901	33.1047	chromosome:CP022093.1; plasmid unnamed1:CP022091.1; plasmid unnamed2:CP022092.1; plasmid unnamed3:CP022094.1	-	4	2606	2334	6/27/17	6/27/17	Complete Genome	US Food and Drug Administration 	SAMN06173368	GCA_002209265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/265/GCA_002209265.1_ASM220926v1	-	FDAARGOS_355
Staphylococcus succinus	61015	PRJNA350340	350340	Terrabacteria group	Firmicutes	2.74567	33.1	chromosome:NZ_CP018199.1/CP018199.1	-	1	2620	2519	12/13/16	4/16/17	Complete Genome	Kookmin University	SAMN05938307	GCA_001902315.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/315/GCA_001902315.1_ASM190231v1	-	14BME20
Yersinia pestis	632	PRJEB15052	337930	Proteobacteria	Gammaproteobacteria	4.42755	47.9	-	FMBU01	48	4265	3823	8/6/16	3/28/17	Scaffold	URMITE	SAMEA4368873	GCA_900095105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/105/GCA_900095105.1_PRJEB15052	-	Algeria3
Pseudomonas fluorescens	294	PRJNA276800	276800	Proteobacteria	Gammaproteobacteria	6.29633	58.9	-	LACE01	47	5845	5678	4/1/15	4/3/17	Scaffold	University of Copenhagen	SAMN03381134	GCA_000967945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/945/GCA_000967945.1_ASM96794v1	-	C1
Campylobacter fetus subsp. testudinum Sp3	1244529	PRJNA177181	177181	Proteobacteria	delta/epsilon subdivisions	1.81905	33.1	chromosome:NZ_CP010953.1/CP010953.1	-	1	1821	1761	1/4/16	4/4/17	Complete Genome	Utrecht University	SAMN03366410	GCA_001484645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/645/GCA_001484645.1_ASM148464v1	-	SP3
Staphylococcus epidermidis	1282	PRJNA255947	255947	Terrabacteria group	Firmicutes	2.66499	31.9	-	JZUM01	45	2704	2523	3/31/15	3/25/17	Contig	Cork Institute of Technology	SAMN03396286	GCA_000966815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/815/GCA_000966815.1_ASM96681v1	25977439	NGS-ED-1110
Bacillus cereus AND1407	1053166	PRJNA70297	70297	Terrabacteria group	Firmicutes	5.50502	35.3	-	AHCM01	17	5929	5568	8/15/12	5/18/17	Scaffold	Broad Institute	SAMN02596798	GCA_000290995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/995/GCA_000290995.1_Baci_cere_AND1407_G13175_V1	-	AND1407
Lactococcus lactis	1358	PRJNA321149	321149	Terrabacteria group	Firmicutes	2.54251	35.7	-	LXWJ01	51	2650	2269	5/17/16	4/5/17	Contig	University of Groningen	SAMN04966301	GCA_001645365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/365/GCA_001645365.1_WG2	-	WG2
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.33054	69	-	BDNI01	162	4992	4754	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076660	GCA_002089375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/375/GCA_002089375.1_ASM208937v1	28045086	IH-217
Haemophilus influenzae	727	PRJNA353277	353277	Proteobacteria	Gammaproteobacteria	1.88321	38	-	MPJH01	7	1915	1771	1/12/17	7/19/17	Scaffold	Menzies School of Health Research	SAMN06013556	GCA_001949825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/825/GCA_001949825.1_ASM194982v1	-	65234 N Hi-1
Mycobacterium tuberculosis TRS4	1334050	PRJNA203162	203162	Terrabacteria group	Actinobacteria	4.41153	65.4	chromosome:NZ_CP009189.1/CP009189.1	-	1	4317	4081	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837624	GCA_001998455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/455/GCA_001998455.1_ASM199845v1	27261264	TRS4
Staphylococcus equorum	246432	PRJNA299343	299343	Terrabacteria group	Firmicutes	2.82219	33.1	chromosome:NZ_CP013114.1/CP013114.1	-	1	2719	2609	11/5/15	4/4/17	Complete Genome	Shinansan University	SAMN04196999	GCA_001432245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/245/GCA_001432245.1_ASM143224v1	-	KS1039
Streptococcus pneumoniae BS457	512768	PRJNA29067	29067	Terrabacteria group	Firmicutes	2.0532	39.6	-	ABWB01	97	2227	2021	8/12/10	3/9/17	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393764	GCA_000173195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/195/GCA_000173195.1_ASM17319v1	-	BS457
Helicobacter pylori	210	PRJDB4296	362565	Proteobacteria	delta/epsilon subdivisions	1.5919	38.9	chromosome:AP017329.1	-	1	1575	1543	1/18/17	1/18/17	Chromosome	"Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture"	SAMD00042462	GCA_002357435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/435/GCA_002357435.1_ASM235743v1	-	F13
Neisseria meningitidis	487	PRJNA244811	244811	Proteobacteria	Betaproteobacteria	2.14193	51.6	-	JMCT01	82	2493	2120	7/20/15	3/21/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02729093	GCA_001183135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/135/GCA_001183135.1_Nm100603	25989189	100603
Streptococcus pyogenes ABC020004984	1438987	PRJNA233211	233211	Terrabacteria group	Firmicutes	1.88411	38.6	-	JJGE01	7	1941	1801	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567560	GCA_000630225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/225/GCA_000630225.1_Stre_pyog_ABC020004984_V1	-	ABC020004984
Leptospira interrogans serovar Jalna str. 2008720116	1291308	PRJNA188963	188963	Spirochaetes	Spirochaetia	4.6496	35	-	AOXA01	183	4176	3771	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920105	GCA_000343415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/415/GCA_000343415.1_CA_glsol026	-	2008720116
Bacillus anthracis	1392	PRJNA257008	257008	Terrabacteria group	Firmicutes	5.46083	35.1	-	LFYF01	36	6129	5725	8/21/15	3/26/17	Contig	µFORGE	SAMN03757454	GCA_001272985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/985/GCA_001272985.1_BANT005-SEQ-1-ASM-1	-	K1285
Shigella flexneri	623	PRJNA393761	393761	Proteobacteria	Gammaproteobacteria	4.58619	50.5	-	NMXV01	500	5183	4111	8/4/17	8/6/17	Contig	Christian Medical College	SAMN07340964	GCA_002242025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/025/GCA_002242025.1_ASM224202v1	-	FC601
Campylobacter fetus subsp. testudinum	1507806	PRJNA241389	241389	Proteobacteria	delta/epsilon subdivisions	1.77639	33.1	chromosome:NZ_CP009226.1/CP009226.1	-	1	1755	1688	1/5/15	4/2/17	Complete Genome	China Medical University	SAMN02689633	GCA_000814265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/265/GCA_000814265.1_ASM81426v1	25700400	pet-3
Acinetobacter baumannii NIPH 2061	1217645	PRJNA183315	183315	Proteobacteria	Gammaproteobacteria	3.98549	38.9	-	APOW01	12	3819	3666	4/16/13	3/15/17	Scaffold	Broad Institute	SAMN01828175	GCA_000368225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/225/GCA_000368225.1_Acin_baum_NIPH_2061_V1	-	NIPH 2061
Streptococcus agalactiae GB00923	1154951	PRJNA86575	86575	Terrabacteria group	Firmicutes	2.21459	35.6	-	ALUQ01	46	2315	2151	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991435	GCA_000288475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/475/GCA_000288475.1_ASM28847v1	-	GB00923
Streptococcus suis YS53	1214207	PRJNA171470	171470	Terrabacteria group	Firmicutes	2.20743	41.1	-	ALMW01	48	2293	2122	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469558	GCA_000441375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/375/GCA_000441375.1_version1	-	YS53
Pseudomonas syringae pv. atrofaciens LMG 5095	1458475	PRJNA237188	237188	Proteobacteria	Gammaproteobacteria	5.89043	58.9	-	JFZI01	1007	5712	4714	6/18/14	3/24/17	Contig	Chungbuk National University	SAMN02687465	GCA_000710085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/085/GCA_000710085.1_PsATROLMG5095	-	LMG 5095
Legionella pneumophila	446	PRJNA281048	281048	Proteobacteria	Gammaproteobacteria	3.36411	38.3	-	LAYA01	35	3073	2971	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03481707	GCA_001582375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/375/GCA_001582375.1_ASM158237v1	26888563	Sctan
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.08002	50.4	-	NQBG01	147	5359	4929	8/11/17	8/15/17	Contig	JCVI	SAMN07450668	GCA_002247525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/525/GCA_002247525.1_ASM224752v1	-	ECH+15
Bacteroides fragilis	817	PRJNA267549	267549	FCB group	Bacteroidetes/Chlorobi group	5.45045	43.6	-	JVLP01	193	4855	4607	7/10/15	4/3/17	Contig	University of Washington	SAMN03197513	GCA_001054895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/895/GCA_001054895.1_ASM105489v1	26230489	322_BFRA
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.46096	67.1	-	MUSG01	138	8011	7533	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001872	GCA_001992135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/135/GCA_001992135.1_ASM199213v1	-	VC7378
Burkholderia pseudomallei 1655	331109	PRJNA13949	13949	Proteobacteria	Betaproteobacteria	7.04113	68	-	AAHR02	80	7324	6703	6/9/05	5/18/17	Scaffold	TIGR	SAMN02435875	GCA_000152325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/325/GCA_000152325.1_ASM15232v1	-	1655
Chlamydia trachomatis	813	PRJNA213111	213111	PVC group	Chlamydiae	1.0416	41.3	chromosome:NC_022109.1/CP006677.1	-	1	966	900	8/21/13	3/24/17	Chromosome	Oregon State University	SAMN02189835	GCA_000590695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/695/GCA_000590695.1_ASM59069v1	23842467	D/14-96
Bacillus thuringiensis serovar navarrensis	339658	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.18787	35.2	-	NFDG01	138	6456	5914	5/17/17	6/15/17	Contig	Huazhong Agricultural University	SAMN05934522	GCA_002146725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/725/GCA_002146725.1_ASM214672v1	-	BGSC 4BM1
Vibrio cholerae HE-40	992000	PRJNA64007	64007	Proteobacteria	Gammaproteobacteria	3.8759	47.7	-	AJRX01	102	3632	3448	10/10/12	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00722741	GCA_000305115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/115/GCA_000305115.2_ASM30511v2	-	HE-40
Clostridioides difficile CD129	1151285	PRJNA85743	85743	Terrabacteria group	Firmicutes	3.98081	28.6	-	AVHP01	963	3876	3614	8/20/13	4/21/17	Contig	Institute for Genome Sciences	SAMN01766583	GCA_000449285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/285/GCA_000449285.1_ASM44928v1	-	CD129
Francisella tularensis subsp. holarctica	119857	PRJNA353900	353900	Proteobacteria	Gammaproteobacteria	1.77549	32.2	-	MRZT01	97	1823	1550	1/17/17	4/6/17	Contig	Swedish Defence Research Agency (FOI)	SAMN03773868	GCA_001953575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/575/GCA_001953575.1_ASM195357v1	-	08T0073
Brucella abortus	235	PRJNA243876	243876	Proteobacteria	Alphaproteobacteria	3.32198	57.2	-	JMSA01	2	3417	3084	8/19/14	3/24/17	Scaffold	Los Alamos National Laboratory	SAMN02767521	GCA_000742215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/215/GCA_000742215.1_ASM74221v1	25237024	BEU
Xanthomonas citri subsp. citri	611301	PRJEB7204	265982	Proteobacteria	Gammaproteobacteria	5.30405	64.6	-	CDAL01	1559	5273	4142	11/4/14	4/3/17	Contig	CIRAD	SAMEA2827225	GCA_000825625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/625/GCA_000825625.1_XACLD7	-	LD7-1
Xanthomonas oryzae pv. oryzae	64187	PRJNA269433	269433	Proteobacteria	Gammaproteobacteria	4.37812	63.9	-	JXFD01	431	4386	3560	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252530	GCA_001928485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/485/GCA_001928485.1_ASM192848v1	-	DXO-206
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.93479	38	-	MLLA01	294	2048	1759	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297014	GCA_001868105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/105/GCA_001868105.1_ASM186810v1	27118061	AWRIB126
Vibrio parahaemolyticus PCV08-7	1276919	PRJNA185026	185026	Proteobacteria	Gammaproteobacteria	5.18499	45.3	-	AOCL01	83	4922	4718	3/18/13	5/19/17	Contig	University of Malaya	SAMN02469951	GCA_000347495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/495/GCA_000347495.1_VibParPCV08-7_1.0	-	PCV08-7
Bacillus subtilis subsp. subtilis	135461	PRJNA254216	254216	Terrabacteria group	Firmicutes	4.06058	43.7	-	JPVX01	12	4219	4094	8/15/14	3/24/17	Contig	INRA - MICALIS	SAMN02902143	GCA_000740485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/485/GCA_000740485.1_ASM74048v1	25291767	NDfood
Campylobacter fetus subsp. testudinum 03-427	1244528	PRJNA177177	177177	Proteobacteria	delta/epsilon subdivisions	1.77548	33.1	chromosome:NC_022759.1/CP006833.1	-	1	1758	1691	11/5/13	4/2/17	Complete Genome	Utrecht University	SAMN02604287	GCA_000495505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/505/GCA_000495505.1_ASM49550v1	24336365	03-427
Clostridium botulinum	1491	PRJNA266242	266242	Terrabacteria group	Firmicutes	4.29147	27.8	-	LAGD01	287	4154	2333	3/27/15	3/25/17	Contig	Centers for Disease Control and Prevention	SAMN03169465	GCA_000965295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/295/GCA_000965295.1_ASM96529v1	-	ATCC 51387
Enterococcus faecalis EnGen0066	1151190	PRJNA85631	85631	Terrabacteria group	Firmicutes	2.89236	37.6	-	AIIO01	4	2964	2801	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00792321	GCA_000390585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/585/GCA_000390585.1_Ente_faec_B84847_V1	-	B84847
Streptococcus mutans 11VS1	857143	PRJNA49777	49777	Terrabacteria group	Firmicutes	1.86196	36.6	-	AHRT01	155	1870	1756	2/11/13	3/23/17	Contig	Cornell University	SAMN02428928	GCA_000339255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/255/GCA_000339255.1_ASM33925v1	23228887	11VS1
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.08842	52.6	-	CQJN01	86	2449	2118	3/23/15	4/11/17	Contig	SC	SAMEA1690327	GCA_001097605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/605/GCA_001097605.1_8289_2_38	-	GCGS038
Enterococcus faecium EnGen0012	1138881	PRJNA82413	82413	Terrabacteria group	Firmicutes	2.8783	38.1	-	AHWI01	20	2951	2746	12/17/12	3/24/17	Scaffold	Broad Institute	SAMN00779811	GCA_000321485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/485/GCA_000321485.1_Ente_faec_E0120_V1	-	E0120
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.34475	66.8	-	JVZY01	319	3997	3834	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197140	GCA_001069345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/345/GCA_001069345.1_ASM106934v1	26230489	1182_SMAL
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.138	41.2	-	CVYU01	79	2088	1889	6/23/15	3/26/17	Contig	SC	SAMEA1032857	GCA_001176725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/725/GCA_001176725.1_6830_4_85	-	EQUI0230
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.46196	40.2	-	LQGB01	43	2381	2262	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366575	GCA_001930965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/930/965/GCA_001930965.1_ASM193096v1	-	3483PM
Lactobacillus rhamnosus	47715	PRJNA326062	326062	Terrabacteria group	Firmicutes	2.9752	46.6	-	MAGA01	98	3076	2775	10/11/16	4/5/17	Contig	Agharkar Research Institute	SAMN05257120	GCA_001756565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/565/GCA_001756565.1_ASM175656v1	-	HCT70
Brucella melitensis bv. 1 str. 133	1229906	PRJNA174379	174379	Proteobacteria	Alphaproteobacteria	3.26538	57.3	-	AMPA01	173	3328	3101	9/19/12	3/30/17	Contig	Beijing Institute of Diseae Control and Prevention	SAMN02469341	GCA_000298595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/595/GCA_000298595.1_V1.0_of_Brucella_melitensis_bv_1_str_133	23209199	133
Methanococcus maripaludis S2	267377	PRJNA10632	10632	Euryarchaeota	Methanococci	1.66114	33.1	chromosome:NC_005791.1/BX950229.1	-	1	1777	1718	3/1/04	4/6/17	Complete Genome	University of Washington	SAMEA3138215	GCA_000011585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/585/GCA_000011585.1_ASM1158v1	15466049	S2
Corynebacterium diphtheriae bv. belfanti	2014537	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.39767	53.6	-	LSVP01	41	2327	2116	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496959	GCA_002202425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/425/GCA_002202425.1_S30	-	631
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.43208	46.9	-	CPYZ01	122	4173	3905	3/23/15	3/26/17	Scaffold	SC	SAMEA980222	GCA_001116445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/445/GCA_001116445.1_4976_3_7	-	ERL022789
Serratia marcescens	615	PRJNA270627	270627	Proteobacteria	Gammaproteobacteria	4.88226	60.1	-	JWLO01	19	4603	4456	12/19/14	3/25/17	Scaffold	INDEAR	SAMN03267740	GCA_000805875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/875/GCA_000805875.1_SmRM66262_v1.0	26634764	RM66262
Lactobacillus plantarum	1590	PRJNA314102	314102	Terrabacteria group	Firmicutes	3.24609	44.5	-	LUXC01	62	3135	2969	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04528842	GCA_001633505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/505/GCA_001633505.1_ASM163350v1	-	Nizo2830
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.72727	31.3	-	CURI01	25	1817	1720	3/31/15	3/18/17	Contig	SC	SAMEA1010500	GCA_001225605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/605/GCA_001225605.1_7092_1_66	-	OXC6513
Burkholderia sp. AU17325	2015348	PRJNA391085	391085	Proteobacteria	Betaproteobacteria	9.32536	65.5	-	NKFA01	104	8836	8410	7/20/17	7/22/17	Contig	University of Michigan	SAMN07257383	GCA_002223275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/275/GCA_002223275.1_ASM222327v1	-	AU17325
Cutibacterium acnes	1747	PRJNA247994	247994	Terrabacteria group	Actinobacteria	2.60222	60.2	-	JNHS01	260	2651	2399	7/17/14	4/2/17	Contig	"University of California, Los Angeles"	SAMN02782297	GCA_000730485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/485/GCA_000730485.1_ASM73048v1	25125638	ATCC 6919
Staphylococcus haemolyticus	1283	PRJNA304951	304951	Terrabacteria group	Firmicutes	2.41255	32.7	-	LRHM01	124	2408	2269	1/22/16	3/27/17	Contig	Institute of Life Sciences	SAMN04311881	GCA_001529465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/465/GCA_001529465.1_ASM152946v1	26988040	SH747
Enterobacter cloacae subsp. cloacae	336306	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.37925	54.5	-	LJEZ01	779	5488	4758	10/16/15	3/26/17	Contig	University of KwaZulu Natal	SAMN04011460	GCA_001317435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/435/GCA_001317435.1_ASM131743v1	-	ST436:951358951
Klebsiella oxytoca	571	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.50582	57	-	FLEF01	63	5622	5340	5/19/16	2/25/17	Scaffold	SC	SAMEA2273607	GCA_900085055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/055/GCA_900085055.1_12045_6_71	-	k547
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.61267	56.7	-	NEXY01	291	4472	4242	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN04329635	GCA_002198805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/805/GCA_002198805.1_ASM219880v1	-	MOD1-comp20
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.10578	64.2	-	CSTS01	24	5107	5001	3/24/15	3/18/17	Contig	SC	SAMEA1464841	GCA_001213565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/565/GCA_001213565.1_7396_6_52	-	PAP004
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.08881	66.8	-	LPAJ01	170	7479	7034	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449346	GCA_001527955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/955/GCA_001527955.1_ASM152795v1	-	MSMB1599WGS
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	3.90854	38.9	-	MDIT01	212	3837	3654	8/25/16	4/5/17	Contig	University of Cologne	SAMN05022878	GCA_001713685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/685/GCA_001713685.1_ASM171368v1	-	UKK-0555
Citrobacter freundii	546	PRJDB4922	325625	Proteobacteria	Gammaproteobacteria	5.30125	51.5	-	BDFK01	153	-	-	6/17/16	6/17/16	Contig	"Faculty of Veterinary Medicine and Animal Science, University of Peradeniya"	SAMD00053739	GCA_001686345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/345/GCA_001686345.1_ASM168634v1	-	A41
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.28029	55	-	JZXX01	151	5247	4955	3/19/15	3/25/17	Contig	JCVI	SAMN03283689	GCA_000958325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/325/GCA_000958325.1_ASM95832v1	-	44517
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.25193	55.1	-	LVUB01	116	5237	4900	4/25/16	4/6/17	Contig	JCVI	SAMN04572600	GCA_001631345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/345/GCA_001631345.1_ASM163134v1	-	GN05352
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.26708	63.9	-	FVNM01	21	5331	5145	3/10/17	3/18/17	Scaffold	SC	SAMEA2070302	GCA_900136655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/655/GCA_900136655.1_10625_5_22	-	107
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.33618	66.8	-	LPLA01	128	7729	7363	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449633	GCA_001533445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/445/GCA_001533445.1_ASM153344v1	-	MSMB724WGS
Pseudomonas sp. HMSC069G05	1739451	PRJNA300101	300101	Proteobacteria	Gammaproteobacteria	6.32954	66.4	-	LTVO01	82	6071	5877	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480374	GCA_001813995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/813/995/GCA_001813995.1_ASM181399v1	-	HMSC069G05
Streptomyces sp. NRRL WC-3719	1463932	PRJNA238534	238534	Terrabacteria group	Actinobacteria	6.57238	74.7	-	JOCD01	599	5871	5354	7/15/14	3/11/17	Scaffold	University of Illinois	SAMN02645410	GCA_000725715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/715/GCA_000725715.1_Doro.v1.0	-	NRRL WC-3719
Bacillus sp. MSP13	1071061	PRJNA271207	271207	Terrabacteria group	Firmicutes	3.8785	43.9	-	JXAQ01	40	4056	3782	1/6/15	4/10/17	Contig	Directorate of Groundnut Research (Indian Council of Agricultural Research)	SAMN03273304	GCA_000815295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/295/GCA_000815295.1_ASM81529v1	-	MSP13
Acinetobacter sp. 478810	1310720	PRJNA194796	194796	Proteobacteria	Gammaproteobacteria	4.12531	38.7	-	JFFH02	280	4141	3742	3/3/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02404547	GCA_000584015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/015/GCA_000584015.2_ASM58401v2	-	478810
Sphingomonas sp. NFR04	1566283	PRJEB17397	351574	Proteobacteria	Alphaproteobacteria	4.77232	67.3	-	FORV01	18	4411	4293	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN03159338	GCA_900114095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/095/GCA_900114095.1_IMG-taxon_2599185359_annotated_assembly	-	NFR04
Clostridium sp. CAG:75	1262836	PRJEB995	206773	Terrabacteria group	Firmicutes	2.58587	42.2	-	CBAE01	228	2314	2286	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138515	GCA_000432555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/555/GCA_000432555.1_MGS75	-	-
Rhodococcus sp. 05-2221-1B	2022498	PRJNA395383	395383	Terrabacteria group	Actinobacteria	6.37803	64.8	-	NOZL01	60	6056	5880	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376368	GCA_002258635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/635/GCA_002258635.1_ASM225863v1	-	05-2221-1B
Enterobacter cloacae complex sp. GN03164	1659719	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.11515	55.7	-	LECZ01	27	4961	4792	6/9/15	4/10/17	Contig	JCVI	SAMN03732732	GCA_001022965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/965/GCA_001022965.1_ASM102296v1	-	GN03164
Staphylococcus sp. HMSC034C12	1715108	PRJNA296236	296236	Terrabacteria group	Firmicutes	2.20321	31.3	-	LTRZ01	57	2177	2093	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498614	GCA_001835895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/895/GCA_001835895.1_ASM183589v1	-	HMSC034C12
Corynebacterium sp. HMSC034E11	1715169	PRJNA296297	296297	Terrabacteria group	Actinobacteria	2.42387	61.6	-	LTRY01	63	2311	2189	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498648	GCA_001835905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/905/GCA_001835905.1_ASM183590v1	-	HMSC034E11
Streptococcus sp. HMSC074F09	1715124	PRJNA296252	296252	Terrabacteria group	Firmicutes	1.99109	35.1	-	LTOK01	34	2010	1929	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498623	GCA_001837855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/855/GCA_001837855.1_ASM183785v1	-	HMSC074F09
Mycobacterium sp. E136	1834125	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.52363	67.2	-	LZJE01	404	5521	5045	6/17/16	4/17/17	Contig	JCVI	SAMN04634236	GCA_001666865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/865/GCA_001666865.1_ASM166686v1	-	E136
Prevotella sp. UBA633	1947176	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.32036	46.5	-	DBOZ01	163	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455719	GCA_002300025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/025/GCA_002300025.1_ASM230002v1	28894102	-
Paenibacillus sp. OK003	1884380	PRJEB16847	350964	Terrabacteria group	Firmicutes	6.72584	46.3	-	FOBD01	45	6009	5761	10/29/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05518856	GCA_900109515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/515/GCA_900109515.1_IMG-taxon_2687453683_annotated_assembly	-	OK003
Prochlorococcus sp. scB245a_518E10	1471504	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.32738	31.5	-	JFNC01	381	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671375	GCA_000635075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/075/GCA_000635075.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. P0134	1895609	PRJNA341027	341027	Proteobacteria	delta/epsilon subdivisions	1.55869	33.6	-	MJKN01	18	1601	1517	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687047	GCA_002139665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/665/GCA_002139665.1_ASM213966v1	28854596	P0134
Rhizobium sp. Root491	1736548	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	5.51385	58.6	-	LMFF01	20	5315	5131	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155817	GCA_001427205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/205/GCA_001427205.1_Root491	26633631	Root491
Mesorhizobium sp. WSM3859	2029402	PRJNA399611	399611	Proteobacteria	Alphaproteobacteria	6.60626	63.5	-	NSGG01	36	6444	6103	9/12/17	9/14/17	Contig	Curtin University	SAMN07540838	GCA_002295065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/065/GCA_002295065.1_ASM229506v1	-	WSM3859
Microbacterium sp. 67-17	1895782	PRJNA279279	279279	Terrabacteria group	Actinobacteria	3.13923	67	-	MKTR01	35	2976	2875	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660560	GCA_001898325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/325/GCA_001898325.1_ASM189832v1	-	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.75063	57.1	-	FXRW01	271	5751	5356	4/28/17	5/6/17	Scaffold	SC	SAMEA2609540	GCA_900182015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/182/015/GCA_900182015.1_14936_2_57	-	3189STDY5864910
Staphylococcus argenteus	985002	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.7946	32.3	-	FQRV01	14	2798	2624	11/25/16	4/6/17	Scaffold	SC	SAMEA3449126	GCA_900128365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/365/GCA_900128365.1_17175_3_70	-	3688STDY6125124
Staphylococcus argenteus	985002	PRJEB20633	390605	Terrabacteria group	Firmicutes	2.80247	32.3	-	FXWA01	188	2762	2586	6/15/17	7/5/17	Scaffold	Geogentics	SAMEA104034172	GCA_900183725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/725/GCA_900183725.1_H1955	-	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.55939	57.5	-	FXRY01	77	5602	5270	4/28/17	5/6/17	Scaffold	SC	SAMEA2609547	GCA_900182035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/182/035/GCA_900182035.1_14936_2_60	-	3189STDY5864913
Microbacterium sp. UBA888	1946957	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.89257	66.2	-	DBFE01	275	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457649	GCA_002294195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/195/GCA_002294195.1_ASM229419v1	28894102	-
Mesorhizobium sp. WSM4311	2029410	PRJNA399611	399611	Proteobacteria	Alphaproteobacteria	6.98036	63	-	NSFV01	43	6850	6461	9/12/17	9/14/17	Contig	Curtin University	SAMN07540849	GCA_002295115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/115/GCA_002295115.1_ASM229511v1	-	WSM4311
Rhizobium sp. Root149	1736473	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	5.46068	58.1	-	LMGD01	26	5208	5007	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155742	GCA_001427345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/345/GCA_001427345.1_Root149	26633631	Root149
Campylobacter sp. P0187	1895615	PRJNA341033	341033	Proteobacteria	delta/epsilon subdivisions	1.65389	33.5	-	MJKT01	18	1707	1627	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687053	GCA_002139695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/695/GCA_002139695.1_ASM213969v1	28854596	P0187
Prochlorococcus sp. scB245a_518J7	1471506	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.38248	31.5	-	JFNE01	426	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671377	GCA_000635095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/095/GCA_000635095.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Paenibacillus sp. OK076	1884379	PRJEB16902	351062	Terrabacteria group	Firmicutes	7.21673	46.3	-	FOCH01	20	6487	6270	10/29/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05518670	GCA_900110055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/055/GCA_900110055.1_IMG-taxon_2690315677_annotated_assembly	-	OK076
Prevotella sp. UBA630	1947174	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.32167	54.1	-	DBPC01	161	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455722	GCA_002300055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/055/GCA_002300055.1_ASM230005v1	28894102	-
Mycobacterium sp. E802	1834152	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.91373	66.4	-	LZJD01	197	5700	5408	6/17/16	4/13/17	Contig	JCVI	SAMN04634237	GCA_001666875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/875/GCA_001666875.1_ASM166687v1	-	E802
Streptococcus sp. HMSC076C09	1715183	PRJNA296311	296311	Terrabacteria group	Firmicutes	2.21645	41.4	-	LTOI01	48	2150	2035	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498651	GCA_001837905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/905/GCA_001837905.1_ASM183790v1	-	HMSC076C09
Corynebacterium sp. HMSC035E02	1715114	PRJNA296242	296242	Terrabacteria group	Actinobacteria	2.76713	61.1	-	LTRQ01	91	2570	2421	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498616	GCA_001836065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/065/GCA_001836065.1_ASM183606v1	-	HMSC035E02
Staphylococcus sp. HMSC034G07	1715065	PRJNA296193	296193	Terrabacteria group	Firmicutes	2.62616	32.4	-	LTRV01	36	2512	2418	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498593	GCA_001835975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/975/GCA_001835975.1_ASM183597v1	-	HMSC034G07
Enterobacter cloacae complex sp. GN02141	1870942	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.20227	55.6	-	LEEP01	138	5145	4861	6/9/15	4/20/17	Contig	JCVI	SAMN03495971	GCA_001023175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/175/GCA_001023175.1_ASM102317v1	-	GN02141
Rhodococcus sp. 15-649-2-2	2023140	PRJNA395383	395383	Terrabacteria group	Actinobacteria	6.0262	64.1	-	NPFM01	52	5726	5587	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07414582	GCA_002258645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/645/GCA_002258645.1_ASM225864v1	-	15-649-2-2
Clostridium sp. CAG:762	1262837	PRJEB999	206789	Terrabacteria group	Firmicutes	1.11405	27.5	-	CBAH01	63	1150	1127	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138516	GCA_000432575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/575/GCA_000432575.1_MGS762	-	-
Sphingomonas sp. OK281	1881067	PRJEB17161	351368	Proteobacteria	Alphaproteobacteria	5.05072	65	-	FOVZ01	20	4487	4339	10/31/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428984	GCA_900115295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/295/GCA_900115295.1_IMG-taxon_2690315632_annotated_assembly	-	OK281
Acinetobacter sp. 723929	1310711	PRJNA194787	194787	Proteobacteria	Gammaproteobacteria	4.08871	38.7	-	JFEX01	134	4077	3779	3/3/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02404539	GCA_000584215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/215/GCA_000584215.1_ASM58421v1	-	723929
Bacillus sp. REN51N	1590026	PRJNA271176	271176	Terrabacteria group	Firmicutes	6.29724	35.7	-	JXAB01	24	6291	6092	1/6/15	4/10/17	Contig	Directorate of Groundnut Research (Indian Council of Agricultural Research)	SAMN03273264	GCA_000815345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/345/GCA_000815345.1_ASM81534v1	-	REN51N
Streptomyces sp. M10	412968	PRJNA176719	176719	Terrabacteria group	Actinobacteria	7.20717	73.3	-	AMZL01	77	6240	5710	12/9/14	3/11/17	Scaffold	School of Life Science and Biotechnology	SAMN02781121	GCA_000800535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/535/GCA_000800535.1_ASM80053v1	25687447	M10
Pseudomonas sp. HMSC073F05	1739490	PRJNA300140	300140	Proteobacteria	Gammaproteobacteria	6.35273	66.5	-	LTUG01	103	6072	5846	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480407	GCA_001814745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/745/GCA_001814745.1_ASM181474v1	-	HMSC073F05
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.26991	66.9	-	LPMP01	58	7622	7287	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449675	GCA_001534085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/085/GCA_001534085.1_ASM153408v1	-	MSMB839WGS
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.92226	64.1	-	FVOI01	21	4889	4717	3/10/17	3/18/17	Scaffold	SC	SAMEA2259655	GCA_900137135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/135/GCA_900137135.1_11893_6_17	-	850
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.39444	55	-	LVUL01	206	5528	5017	4/25/16	4/6/17	Contig	JCVI	SAMN04572687	GCA_001631565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/565/GCA_001631565.1_ASM163156v1	-	GN05662
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.29384	55.1	-	JZXW01	164	5273	4989	3/19/15	3/25/17	Contig	JCVI	SAMN03283653	GCA_000958345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/345/GCA_000958345.1_ASM95834v1	-	44524
Citrobacter freundii	546	PRJDB4922	325625	Proteobacteria	Gammaproteobacteria	5.13891	51.5	-	BDFL01	58	-	-	6/17/16	6/17/16	Contig	"Faculty of Veterinary Medicine and Animal Science, University of Peradeniya"	SAMD00053738	GCA_001686385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/385/GCA_001686385.1_ASM168638v1	-	CF04
Acinetobacter pittii	48296	PRJNA319366	319366	Proteobacteria	Gammaproteobacteria	4.03537	38.8	-	MIZX01	148	3952	3720	9/24/16	4/5/17	Contig	"Jet Propulsion Laboratory, California Institute of Technology"	SAMN04902362	GCA_001743435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/743/435/GCA_001743435.1_ASM174343v1	-	IIF1SW-P1
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.71152	67.2	-	LPAK01	108	7002	6643	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449347	GCA_001527985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/527/985/GCA_001527985.1_ASM152798v1	-	MSMB1600WGS
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.84693	64.1	-	CSUO01	63	4880	4716	3/24/15	3/18/17	Contig	SC	SAMEA1464867	GCA_001213905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/905/GCA_001213905.1_7396_6_76	-	PAP028
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.53877	56.8	-	NHQM01	39	4398	4215	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN04329634	GCA_002198815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/815/GCA_002198815.1_ASM219881v1	-	MOD1-comp19
Klebsiella oxytoca	571	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	9.27361	49.4	-	JWCM01	1558	-	-	7/10/15	7/13/16	Scaffold	University of Washington	SAMN03197074	GCA_001052795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/795/GCA_001052795.1_ASM105279v1	26230489	112_KOXY
Enterobacter cloacae	550	PRJEB8964	279573	Proteobacteria	Gammaproteobacteria	4.50138	55.5	-	CTRQ01	18	4388	4175	3/27/15	3/27/17	Contig	URMITE	SAMEA3312983	GCA_001375695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/695/GCA_001375695.1_PRJEB8964_assembly_1	-	Marseille
Staphylococcus haemolyticus	1283	PRJNA259936	259936	Terrabacteria group	Firmicutes	2.44707	32.7	-	JRAX01	173	2404	2204	8/15/16	3/28/17	Contig	Research Institute of Physical-Chemical Medicine	SAMN03014697	GCA_001705085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/085/GCA_001705085.1_ASM170508v1	-	421
Propionibacterium acnes HL202PA1	1271533	PRJNA183892	183892	Terrabacteria group	Actinobacteria	2.48242	60.1	-	AODB01	44	2480	2264	7/28/14	4/2/17	Contig	"University of California, Los Angeles"	SAMN02943196	GCA_000735055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/055/GCA_000735055.1_PacnesHL202PA1v1.0	-	HL202PA1
Burkholderia sp. AU16482	2015346	PRJNA391085	391085	Proteobacteria	Betaproteobacteria	7.36095	67.1	-	NKEY01	30	6781	6436	7/20/17	7/22/17	Contig	University of Michigan	SAMN07257381	GCA_002223285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/285/GCA_002223285.1_ASM222328v1	-	AU16482
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.80431	31.1	-	CULY01	31	1871	1752	3/31/15	3/18/17	Contig	SC	SAMEA1010613	GCA_001226185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/185/GCA_001226185.1_7065_7_26	-	OXC6372
Lactobacillus plantarum	1590	PRJNA314098	314098	Terrabacteria group	Firmicutes	3.37251	44.4	-	LUWZ01	89	3324	3094	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04528827	GCA_001633545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/545/GCA_001633545.1_ASM163354v1	-	Nizo2802
Serratia marcescens	615	PRJNA282428	282428	Proteobacteria	Gammaproteobacteria	5.4844	59.1	-	LCWI01	63	5230	5057	5/14/15	3/26/17	Scaffold	KRIBB	SAMN03610504	GCA_001007555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/555/GCA_001007555.1_2015-04-28	26089427	90-166
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.52115	46.8	-	CPVJ01	113	4263	4006	3/23/15	3/26/17	Scaffold	SC	SAMEA980214	GCA_001118285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/285/GCA_001118285.1_4976_3_10	-	ERL08599
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.46274	53.5	-	LSVU01	27	2368	2207	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496964	GCA_002202435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/435/GCA_002202435.1_S37	-	933a
Staphylococcus capitis	29388	PRJDB4225	369778	Terrabacteria group	Firmicutes	2.48678	33.0952	chromosome:AP014956.1; plasmid ptw2795:AP017298.1	-	2	2403	2326	2/2/17	2/2/17	Complete Genome	"Department of Bacteriology, Jichi medical University"	SAMD00041516	GCA_002356175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/175/GCA_002356175.1_ASM235617v1	-	TW2795
Brucella melitensis bv. 3 str. 128	1229904	PRJNA174377	174377	Proteobacteria	Alphaproteobacteria	3.27629	57.3	-	AMPB01	123	3330	3118	9/19/12	3/30/17	Contig	Beijing Institute of Disease Control and Prevention	SAMN02469335	GCA_000298615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/615/GCA_000298615.1_V1.0_of_Brucella_melitensis_bv.3_str_128	23209219	128
Lactobacillus rhamnosus	47715	PRJNA361452	361452	Terrabacteria group	Firmicutes	2.85773	46.8	-	MTJY01	60	2872	2691	2/9/17	4/6/17	Contig	Federal University of Triangulo Mineiro	SAMN06233883	GCA_001991035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/035/GCA_001991035.1_ASM199103v1	-	L156.4
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.3031	40.2	-	LQGM01	26	2194	2092	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366586	GCA_001931115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/115/GCA_001931115.1_ASM193111v1	-	68BPM
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15138	41.2	-	CWFD01	78	2088	1922	6/23/15	3/26/17	Contig	SC	SAMEA1032858	GCA_001176745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/745/GCA_001176745.1_6903_8_71	-	EQUI0216
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.36455	66.7	-	JVXD01	230	4021	3861	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197213	GCA_001069405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/405/GCA_001069405.1_ASM106940v1	26230489	1247_SMAL
Enterococcus faecium EnGen0010	1138882	PRJNA82415	82415	Terrabacteria group	Firmicutes	2.67872	38.6	-	AHWJ01	14	2663	2400	12/17/12	3/24/17	Scaffold	Broad Institute	SAMN00779822	GCA_000321505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/505/GCA_000321505.1_Ente_faec_E0164_V1	-	E0164
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14394	52.5	-	CQNM01	84	2493	2164	3/22/15	4/11/17	Contig	SC	SAMEA1690431	GCA_001097725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/725/GCA_001097725.1_8289_2_24	-	GCGS024
Streptococcus mutans 5SM3	857142	PRJNA49779	49779	Terrabacteria group	Firmicutes	1.94364	36.8	-	AHRU01	86	1914	1808	2/11/13	3/23/17	Contig	Cornell University	SAMN02428985	GCA_000339275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/275/GCA_000339275.1_ASM33927v1	23228887	5SM3
Enterococcus faecalis EnGen0063	1151191	PRJNA85633	85633	Terrabacteria group	Firmicutes	3.20972	37.2	-	AIIP01	10	3252	3027	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00792322	GCA_000390605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/605/GCA_000390605.1_Ente_faec_C_19315_led_1A_WT_V1	-	C19315WT
Clostridium botulinum	1491	PRJNA266242	266242	Terrabacteria group	Firmicutes	3.88694	28	-	LAGN01	189	3769	1818	3/27/15	3/25/17	Contig	Centers for Disease Control and Prevention	SAMN03169476	GCA_000965375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/375/GCA_000965375.1_ASM96537v1	-	Prevot25NCASE
Lawsonia intracellularis PHE/MN1-00	363253	PRJNA183	183	Proteobacteria	delta/epsilon subdivisions	1.71901	33.0922	chromosome:NC_008011.1/AM180252.1; plasmid 1:NC_008012.1/AM180253.1; plasmid 2:NC_008013.1/AM180254.1; plasmid 3:NC_008014.1/AM180255.1	-	4	1481	1419	5/4/06	4/7/17	Complete Genome	Univ. Minnesota	SAMEA3138257	GCA_000055945.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/055/945/GCA_000055945.1_ASM5594v1	-	PHE/MN1-00
Bacillus subtilis Miyagi-4	1227747	PRJDB496	259839	Terrabacteria group	Firmicutes	4.0765	43.3	-	BALZ01	403	4409	4034	8/30/14	3/24/17	Contig	Keio University	SAMD00015754	GCA_000747645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/645/GCA_000747645.1_ASM74764v1	-	Miyagi-4
Vibrio parahaemolyticus VP-NY4	1238218	PRJNA176653	176653	Proteobacteria	Gammaproteobacteria	5.2478	45.4	-	AVON01	14	5053	4803	8/22/13	3/24/17	Contig	IGS	SAMN02190055	GCA_000454145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/145/GCA_000454145.1_ASM45414v1	-	VP-NY4
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.93877	38	-	MLLB01	285	1998	1781	11/7/16	11/7/16	Contig	Australian Wine Research Institute	SAMN04297015	GCA_001868115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/115/GCA_001868115.1_ASM186811v1	27118061	AWRIB127
Xanthomonas oryzae pv. oryzae	64187	PRJNA269435	269435	Proteobacteria	Gammaproteobacteria	4.27479	63.9	-	JXFF01	443	4271	3439	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252519	GCA_001928495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/495/GCA_001928495.1_ASM192849v1	-	DXO-226
Xanthomonas citri subsp. citri	611301	PRJEB7189	265967	Proteobacteria	Gammaproteobacteria	5.23132	64.7	-	CDMS01	339	4784	4370	1/13/15	4/3/17	Contig	CIRAD	SAMEA2827561	GCA_000829945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/945/GCA_000829945.1_XACJM35	-	JM35-2
Brucella abortus	235	PRJNA284953	284953	Proteobacteria	Alphaproteobacteria	3.27711	57.2	-	LIUE01	18	3371	3145	10/21/15	3/27/17	Scaffold	University of New Hampshire	SAMN03965487	GCA_001402105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/105/GCA_001402105.1_ASM140210v1	26679575	9261
Francisella tularensis subsp. holarctica FSC022	430556	PRJNA355394	355394	Proteobacteria	Gammaproteobacteria	1.85831	32.3	-	MRBT01	90	2007	1544	3/14/17	7/3/17	Contig	Swedish Defence Research Agency (FOI)	SAMN06075683	GCA_002027465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/465/GCA_002027465.1_ASM202746v1	28348839	FSC022
Clostridioides difficile CD131	1151286	PRJNA85745	85745	Terrabacteria group	Firmicutes	4.32052	28.2	-	AVHQ01	134	4068	3866	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766585	GCA_000449305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/305/GCA_000449305.2_ASM44930v2	-	CD131
Vibrio cholerae HE-46	992001	PRJNA64009	64009	Proteobacteria	Gammaproteobacteria	3.87452	47.7	-	AJRY01	100	3630	3450	10/10/12	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00722963	GCA_000305135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/135/GCA_000305135.2_ASM30513v2	-	HE-46
Bacillus thuringiensis serovar kim	180847	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.46924	34.7	-	NFDH01	105	6703	6233	5/17/17	6/16/17	Contig	Huazhong Agricultural University	SAMN05934524	GCA_002146755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/755/GCA_002146755.1_ASM214675v1	-	BGSC 4BP1
Chlamydia trachomatis	813	PRJNA213111	213111	PVC group	Chlamydiae	1.04318	41.3	chromosome:NC_022120.1/CP006678.1	-	1	965	902	8/21/13	3/24/17	Chromosome	Oregon State University	SAMN02189836	GCA_000590715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/715/GCA_000590715.1_ASM59071v1	23842467	Ia20-97
Burkholderia pseudomallei Pasteur 52237	331978	PRJNA13952	13952	Proteobacteria	Betaproteobacteria	7.36099	68	-	AAHV02	78	7548	6915	6/9/05	5/18/17	Scaffold	TIGR	SAMN02435833	GCA_000152345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/345/GCA_000152345.1_ASM15234v1	-	Pasteur 52237
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.96294	67.1	-	MUSI01	105	7529	7076	2/10/17	4/2/17	Contig	University of British Columbia	SAMN05001874	GCA_001992155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/155/GCA_001992155.1_ASM199215v1	-	VC7884
Bacteroides fragilis	817	PRJNA267549	267549	FCB group	Bacteroidetes/Chlorobi group	5.31401	43.5	-	JUPJ01	435	4756	4437	7/10/15	4/3/17	Contig	University of Washington	SAMN03198091	GCA_001058755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/755/GCA_001058755.1_ASM105875v1	26230489	885_BFRA
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.63259	50.3	-	NQBH01	375	6062	5502	8/11/17	8/15/17	Contig	JCVI	SAMN07450667	GCA_002247555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/555/GCA_002247555.1_ASM224755v1	-	ECH+16
Legionella pneumophila	446	PRJNA281044	281044	Proteobacteria	Gammaproteobacteria	3.53409	38.2	-	LAYB01	80	3265	3105	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03481706	GCA_001582385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/385/GCA_001582385.1_ASM158238v1	26888563	SH135
Pseudomonas syringae	317	PRJNA255825	255825	Proteobacteria	Gammaproteobacteria	5.26481	59.3	-	JPQV01	80	4916	4658	8/1/14	3/24/17	Contig	University of Arizona	SAMN02929202	GCA_000737225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/225/GCA_000737225.1_UB0390_1.0_131105	-	UB0390
Streptococcus suis YS59	1214211	PRJNA171474	171474	Terrabacteria group	Firmicutes	2.20079	41	-	ALNA01	58	2249	2086	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469531	GCA_000441395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/395/GCA_000441395.1_version1	-	YS59
Streptococcus agalactiae GB00924	1154952	PRJNA86577	86577	Terrabacteria group	Firmicutes	2.06022	35.3	-	ALUR01	24	2131	2011	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991436	GCA_000288495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/495/GCA_000288495.1_ASM28849v1	-	GB00924
Acinetobacter baumannii NIPH 1734	1217644	PRJNA183314	183314	Proteobacteria	Gammaproteobacteria	3.97476	39	-	APOX01	11	3742	3593	4/16/13	3/15/17	Scaffold	Broad Institute	SAMN01828174	GCA_000368245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/245/GCA_000368245.1_Acin_baum_NIPH_1734_V1	-	NIPH 1734
Lawsonia intracellularis N343	1234378	PRJNA175550	175550	Proteobacteria	delta/epsilon subdivisions	1.71919	33.0918	chromosome:NC_020127.1/CP004029.1; plasmid 1:NC_020128.1/CP004030.1; plasmid 2:NC_020129.1/CP004031.1; plasmid 3:NC_020130.1/CP004032.1	-	4	1481	1421	1/14/13	4/8/17	Complete Genome	Moredun Research Institute	SAMN02603631	GCA_000331715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/715/GCA_000331715.1_ASM33171v1	23472224	N343
Shigella flexneri	623	PRJNA393761	393761	Proteobacteria	Gammaproteobacteria	4.57985	50.5	-	NMXP01	437	5190	4158	8/4/17	8/6/17	Contig	Christian Medical College	SAMN07340971	GCA_002242095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/095/GCA_002242095.1_ASM224209v1	-	FC420
Bacillus anthracis	1392	PRJNA257008	257008	Terrabacteria group	Firmicutes	5.45942	35.1	-	LFYG01	28	6130	5752	8/21/15	3/26/17	Contig	µFORGE	SAMN03757455	GCA_001273005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/005/GCA_001273005.1_BANT006-SEQ-1-ASM-1	-	K2129
Leptospira interrogans serovar Jalna str. 2008720117	1291309	PRJNA188964	188964	Spirochaetes	Spirochaetia	4.63786	35	-	AOWZ01	176	4183	3750	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920628	GCA_000343435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/435/GCA_000343435.1_CA_glsol027	-	2008720117
Streptococcus pyogenes ABC020058759	1439288	PRJNA233205	233205	Terrabacteria group	Firmicutes	1.83304	38.5	-	JJGF01	3	1859	1739	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567554	GCA_000630245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/245/GCA_000630245.1_Stre_pyog_ABC020058759_V1	-	ABC020058759
Neisseria meningitidis	487	PRJNA244813	244813	Proteobacteria	Betaproteobacteria	2.08342	51.8	-	JMCV01	68	2425	2052	7/20/15	3/21/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02729097	GCA_001183165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/165/GCA_001183165.1_Nm131148	25989189	131148
Helicobacter pylori	210	PRJDB4296	362565	Proteobacteria	delta/epsilon subdivisions	1.57144	38.9	chromosome:AP017330.1	-	1	1546	1515	1/18/17	1/18/17	Chromosome	"Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture"	SAMD00042463	GCA_002357455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/455/GCA_002357455.1_ASM235745v1	-	F17
Streptococcus pneumoniae BS397	512767	PRJNA29075	29075	Terrabacteria group	Firmicutes	2.0708	39.7	-	ABWC01	22	2242	2007	8/12/10	3/9/17	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393766	GCA_000173215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/215/GCA_000173215.1_ASM17321v1	-	BS397
Campylobacter fetus subsp. venerealis	32020	PRJNA183990	183990	Proteobacteria	delta/epsilon subdivisions	1.93037	33.0836	chromosome:NZ_CP014568.1/CP014568.1; plasmid mp1:NZ_CP014569.1/CP014569.1; plasmid mp2:NZ_CP014570.1/CP014570.1	-	3	1965	1860	7/16/16	4/5/17	Complete Genome	Utrecht University	SAMN04505906	GCA_001686885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/885/GCA_001686885.1_ASM168688v1	25232170	01/165
Mycobacterium tuberculosis TRS28	1334074	PRJNA203186	203186	Terrabacteria group	Actinobacteria	4.41153	65.6	chromosome:NZ_CP009194.1/CP009194.1	-	1	4272	4101	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837648	GCA_001998485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/485/GCA_001998485.1_ASM199848v1	27261264	TRS28
Haemophilus influenzae	727	PRJNA353278	353278	Proteobacteria	Gammaproteobacteria	1.92212	38	-	MPJI01	14	1955	1809	1/12/17	7/24/17	Scaffold	Menzies School of Health Research	SAMN06013557	GCA_001949855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/855/GCA_001949855.1_ASM194985v1	28604066	65373 B Hi-3
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.75268	68.7	-	BDNJ01	415	5537	5131	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076661	GCA_002089395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/395/GCA_002089395.1_ASM208939v1	28045086	IH-483
Lactococcus lactis subsp. lactis	1360	PRJNA369137	369137	Terrabacteria group	Firmicutes	2.26084	35.1	-	MUBH01	41	2303	2162	2/5/17	4/6/17	Contig	Instituto Superior Tecnico	SAMN06277565	GCA_001984785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/785/GCA_001984785.1_ASM198478v1	-	LMG 19460
Bacillus cereus BAG1O-2	1053168	PRJNA70301	70301	Terrabacteria group	Firmicutes	5.58534	35.2	-	AHCO01	8	5915	5538	8/16/12	6/15/17	Scaffold	Broad Institute	SAMN02596800	GCA_000291015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/015/GCA_000291015.1_Baci_cere_BAG1O-2_G13159_V1	-	BAG1O-2
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.70216	31.8	-	JWGV01	122	2680	2591	7/10/15	3/26/17	Contig	University of Washington	SAMN03196961	GCA_001061715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/715/GCA_001061715.1_ASM106171v1	26230489	100_SEPI
Lactobacillus salivarius str. Ren	1194971	PRJNA247452	247452	Terrabacteria group	Firmicutes	1.97836	33.0757	chromosome:NZ_CP011403.1/CP011403.1; plasmid pR1:NZ_CP011404.1/CP011404.1; plasmid pR2:NZ_CP011405.1/CP011405.1	-	3	1990	1816	5/21/15	4/3/17	Complete Genome	China Agricultural University	SAMN02584770	GCA_001011095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/095/GCA_001011095.1_ASM101109v1	-	Ren
Pseudomonas fluorescens	294	PRJNA276802	276802	Proteobacteria	Gammaproteobacteria	6.70557	59	-	LACD01	76	6190	5996	4/1/15	4/3/17	Scaffold	University of Copenhagen	SAMN03381143	GCA_000967955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/955/GCA_000967955.1_ASM96795v1	-	C3
Yersinia pestis biovar Antiqua str. UG05-0454	404218	PRJNA17691	17691	Proteobacteria	Gammaproteobacteria	4.83825	47.7	-	AAYR01	98	4723	4412	3/26/07	5/19/17	Contig	TIGR	SAMN02404404	GCA_000169615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/615/GCA_000169615.1_ASM16961v1	-	UG05-0454
Staphylococcus equorum	246432	PRJNA306199	306199	Terrabacteria group	Firmicutes	2.7922	33.0174	chromosome:NZ_CP013980.1/CP013980.1; plasmid unnamed1:NZ_CP013981.1/CP013981.1; plasmid unnamed2:NZ_CP013982.1/CP013982.1; plasmid unnamed3:NZ_CP013983.1/CP013983.1	-	4	2679	2549	7/11/16	4/5/17	Complete Genome	Shinansan University	SAMN04364120	GCA_001683315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/315/GCA_001683315.1_ASM168331v1	-	KM1031
Lactobacillus salivarius CECT 5713	712961	PRJNA43535	43535	Terrabacteria group	Firmicutes	2.13614	33.0072	chromosome:NC_017481.1/CP002034.1; plasmid pHN1:NC_017479.1/CP002035.1; plasmid pHN2:NC_017480.1/CP002036.1; plasmid pHN3:NC_017499.1/CP002037.1	-	4	2220	1920	7/7/10	3/30/17	Complete Genome	Universidad Complutense de Madrid	SAMN02604101	GCA_000143435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/143/435/GCA_000143435.1_ASM14343v1	20675488	CECT 5713
Lactobacillus salivarius UCC118	362948	PRJNA13280	13280	Terrabacteria group	Firmicutes	2.13398	33.0066	chromosome:NC_007929.1/CP000233.1; plasmid pMP118:NC_007930.1/CP000234.1; plasmid pSF118-20:NC_006529.1/AF488831.1; plasmid pSF118-44:NC_006530.1/AF488832.1	-	4	2182	2013	3/30/06	8/3/16	Complete Genome	University College Cork	SAMN02604111	GCA_000008925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/925/GCA_000008925.1_ASM892v1	16617113	UCC118
Staphylococcus aureus subsp. aureus	46170	PRJNA315880	315880	Terrabacteria group	Firmicutes	2.83343	33	chromosome:NZ_CP017091.1/CP017091.1	-	1	2921	2750	6/21/17	6/24/17	Complete Genome	USDA-ARS	SAMN04571756	GCA_002204575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/575/GCA_002204575.1_ASM220457v1	-	ISU926
Staphylococcus aureus	1280	PRJNA368957	368957	Terrabacteria group	Firmicutes	2.81905	33	chromosome:NZ_CP019594.1/CP019594.1	-	1	2957	2762	4/13/17	4/17/17	Complete Genome	University of Calgary	SAMN06274093	GCA_002089115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/115/GCA_002089115.1_ASM208911v1	-	GD1539
Staphylococcus xylosus	1288	PRJNA307611	307611	Terrabacteria group	Firmicutes	2.91	33	chromosome:NZ_CP013922.1/CP013922.1	-	1	2757	2641	4/4/17	4/5/17	Complete Genome	National Institute of Agricultural Science	SAMN04383932	GCA_002078255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/255/GCA_002078255.1_ASM207825v1	-	S170
Yersinia pestis biovar Orientalis str. MG05-1020	404217	PRJNA17689	17689	Proteobacteria	Gammaproteobacteria	4.97761	47.6	-	AAYS01	80	4815	4525	3/26/07	5/19/17	Contig	TIGR	SAMN02404403	GCA_000169635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/635/GCA_000169635.1_ASM16963v1	-	MG05-1020
Pseudomonas fluorescens	294	PRJNA276804	276804	Proteobacteria	Gammaproteobacteria	6.28701	60	-	LACC01	90	5781	5592	4/1/15	4/3/17	Scaffold	University of Copenhagen	SAMN03381145	GCA_000967965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/965/GCA_000967965.1_ASM96796v1	-	C8
Staphylococcus aureus	1280	PRJNA305475	305475	Terrabacteria group	Firmicutes	2.89454	33	chromosome:NZ_CP013621.1/CP013621.1	-	1	3006	2815	12/14/15	3/5/17	Complete Genome	RIVM	SAMN04325940	GCA_001465755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/465/755/GCA_001465755.1_ASM146575v1	27129960	RIVM3897
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.47357	31.8	-	JUVS01	139	2409	2321	7/10/15	3/26/17	Contig	University of Washington	SAMN03197926	GCA_001066085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/085/GCA_001066085.1_ASM106608v1	26230489	721_SAUR
Bacillus cereus BAG1X1-2	1053171	PRJNA70307	70307	Terrabacteria group	Firmicutes	5.8562	35	-	AHCR01	10	6163	5779	8/16/12	5/18/17	Scaffold	Broad Institute	SAMN02596803	GCA_000291035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/035/GCA_000291035.1_Baci_cere_BAG1X1-2_G13151_V1	-	BAG1X1-2
Lactococcus lactis	1358	PRJNA384401	384401	Terrabacteria group	Firmicutes	2.47875	34.8	-	NEQN01	25	2524	2389	4/28/17	5/3/17	Contig	Brigham Young University	SAMN06837735	GCA_002115705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/705/GCA_002115705.1_ASM211570v1	-	DmW198
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.43968	68.9	-	BDNK01	327	5190	4852	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076663	GCA_002089415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/415/GCA_002089415.1_ASM208941v1	28045086	IH-532
Haemophilus influenzae	727	PRJNA353276	353276	Proteobacteria	Gammaproteobacteria	1.88197	38	-	MPJG01	9	1906	1768	1/12/17	7/24/17	Scaffold	Menzies School of Health Research	SAMN06013555	GCA_001949875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/875/GCA_001949875.1_ASM194987v1	28604066	65234 B Hi-2
Mycobacterium tuberculosis TRS8	1334054	PRJNA203166	203166	Terrabacteria group	Actinobacteria	4.41153	65.4	chromosome:NZ_CP009196.1/CP009196.1	-	1	4302	4071	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837628	GCA_001998545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/545/GCA_001998545.1_ASM199854v1	27261264	TRS8
Staphylococcus aureus subsp. aureus	46170	PRJNA302644	302644	Terrabacteria group	Firmicutes	2.8414	32.997	chromosome:NZ_CP013218.1/CP013218.1; plasmid paadD:NZ_CP014695.1/CP014695.1; plasmid plinE154:NZ_CP014694.1/CP014694.1	-	3	2942	2767	11/28/16	3/6/17	Complete Genome	Faculte de Medecine Veterinaire - Universite de Montreal	SAMN04276964	GCA_001887075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/075/GCA_001887075.1_ASM188707v1	-	LA-MRSA ST398
Streptococcus pneumoniae SP14-BS292	497962	PRJNA28511	28511	Terrabacteria group	Firmicutes	2.10037	39.5	-	ABWQ01	25	2278	2046	8/12/10	3/18/17	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393762	GCA_000173275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/275/GCA_000173275.1_ASM17327v1	-	SP14-BS292
Helicobacter pylori	210	PRJDB4296	362565	Proteobacteria	delta/epsilon subdivisions	1.60791	38.9	chromosome:AP017331.1	-	1	1589	1558	1/18/17	1/18/17	Chromosome	"Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture"	SAMD00042464	GCA_002357475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/475/GCA_002357475.1_ASM235747v1	-	F18
Neisseria meningitidis	487	PRJNA244816	244816	Proteobacteria	Betaproteobacteria	2.11992	51.6	-	JMCW01	90	2460	2089	7/20/15	3/21/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02729102	GCA_001183175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/175/GCA_001183175.1_Nm130803	25989189	130803
Streptococcus pyogenes ABC020056885	1439274	PRJNA233204	233204	Terrabacteria group	Firmicutes	1.833	38.5	-	JJGG01	2	1880	1753	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567553	GCA_000630265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/265/GCA_000630265.1_Stre_pyog_ABC020056885_V1	-	ABC020056885
Leptospira interrogans serovar Pyrogenes str. 2006006973	1291357	PRJNA188965	188965	Spirochaetes	Spirochaetia	4.79835	35	-	AOWY01	195	4356	3903	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920108	GCA_000343455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/455/GCA_000343455.1_CA_glsol032	-	2006006973
Bacillus anthracis	1392	PRJNA257008	257008	Terrabacteria group	Firmicutes	5.45845	35.1	-	LFYH01	32	6130	5723	8/21/15	3/26/17	Contig	µFORGE	SAMN03757456	GCA_001273025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/025/GCA_001273025.1_BANT007-SEQ-1-ASM-1	-	K2883
Shigella flexneri	623	PRJNA393761	393761	Proteobacteria	Gammaproteobacteria	4.5886	50.5	-	NMXO01	486	5201	4138	8/4/17	8/6/17	Contig	Christian Medical College	SAMN07340972	GCA_002242155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/155/GCA_002242155.1_ASM224215v1	-	FC248
Staphylococcus aureus subsp. aureus LGA251	985006	PRJEA62883	62883	Terrabacteria group	Firmicutes	2.75383	32.9958	chromosome:NC_017349.1/FR821779.1; plasmid pLGA251:NC_017348.1/FR821780.1	-	2	2818	2632	8/18/11	3/2/17	Complete Genome	The Wellcome Trust Sanger Institute	SAMEA2272771	GCA_000237265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/265/GCA_000237265.1_ASM23726v1	21641281	LGA251
Acinetobacter baumannii NIPH 190	1217640	PRJNA183300	183300	Proteobacteria	Gammaproteobacteria	3.94986	39.3	-	APPL01	11	3832	3558	4/16/13	3/15/17	Scaffold	Broad Institute	SAMN01828165	GCA_000368525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/525/GCA_000368525.1_Acin_baum_NIPH_190_V1	-	NIPH 190
Streptococcus agalactiae GB00929	1154953	PRJNA86579	86579	Terrabacteria group	Firmicutes	2.21954	35.7	-	ALUS01	47	2306	2161	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991362	GCA_000288515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/515/GCA_000288515.1_ASM28851v1	-	GB00929
Streptococcus suis YS64	1214213	PRJNA171475	171475	Terrabacteria group	Firmicutes	2.06667	41.1	-	ALNB01	59	2049	1926	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469543	GCA_000441415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/415/GCA_000441415.1_version1	-	YS64
Pseudomonas syringae	317	PRJNA255816	255816	Proteobacteria	Gammaproteobacteria	6.68128	58.4	-	JPQT01	183	6145	5960	8/1/14	3/24/17	Contig	University of Arizona	SAMN02929201	GCA_000737235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/235/GCA_000737235.1_CEB003_1.0_131105	-	CEB003
Legionella pneumophila	446	PRJNA281141	281141	Proteobacteria	Gammaproteobacteria	3.66604	38.2	-	LAZZ01	55	3386	3230	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03483306	GCA_001582395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/395/GCA_001582395.1_ASM158239v1	26888563	ZJ050052
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.70517	50.9	-	NQBM01	117	4995	4572	8/11/17	8/15/17	Contig	JCVI	SAMN07450642	GCA_002247575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/575/GCA_002247575.1_ASM224757v1	-	ECLC+06
Bacteroides fragilis	817	PRJNA267549	267549	FCB group	Bacteroidetes/Chlorobi group	5.31449	43.5	-	JUOZ01	370	4736	4467	7/10/15	4/3/17	Contig	University of Washington	SAMN03198101	GCA_001058775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/775/GCA_001058775.1_ASM105877v1	26230489	894_BFRA
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.92654	67	-	MUWY01	177	7648	7113	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001864	GCA_001992165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/165/GCA_001992165.1_ASM199216v1	-	VC7690
Burkholderia pseudomallei S13	320374	PRJNA13951	13951	Proteobacteria	Betaproteobacteria	7.39856	68.1	-	AAHW02	72	7669	7103	6/9/05	5/18/17	Scaffold	TIGR	SAMN02435876	GCA_000152365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/365/GCA_000152365.1_ASM15236v1	-	S13
Chlamydia trachomatis	813	PRJNA213111	213111	PVC group	Chlamydiae	1.04278	41.3	chromosome:NC_022110.1/CP006679.1	-	1	969	883	8/21/13	3/24/17	Chromosome	Oregon State University	SAMN02189837	GCA_000590735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/735/GCA_000590735.1_ASM59073v1	23842467	J/27-97
Bacillus thuringiensis serovar asturiensis	180892	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.6737	35.3	-	NFDI01	66	5932	5567	5/17/17	6/16/17	Contig	Huazhong Agricultural University	SAMN05934525	GCA_002146775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/775/GCA_002146775.1_ASM214677v1	-	BGSC 4BQ1
Vibrio cholerae HC-59A1	991977	PRJNA63961	63961	Proteobacteria	Gammaproteobacteria	3.93465	47.8	-	AJRS01	114	3741	3516	10/10/12	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00715107	GCA_000305195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/195/GCA_000305195.2_ASM30519v2	-	HC-59A1
Clostridioides difficile CD132	1151287	PRJNA85747	85747	Terrabacteria group	Firmicutes	3.95694	28.3	-	AVHR01	196	3691	3426	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766586	GCA_000449325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/325/GCA_000449325.2_ASM44932v2	-	CD132
Francisella tularensis subsp. holarctica	119857	PRJNA286987	286987	Proteobacteria	Gammaproteobacteria	1.78204	32.2	-	MQVC01	103	1827	1552	3/15/17	7/3/17	Contig	Spiez Laboratory	SAMN03774932	GCA_002027725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/725/GCA_002027725.1_ASM202772v1	28348839	FT-32
Brucella abortus RB51-AHVLA	1198700	PRJNA182878	182878	Proteobacteria	Alphaproteobacteria	3.2675	57	-	ANOO01	37	3323	2802	11/3/16	4/10/17	Scaffold	The Ministry of Science and Technology of the People's Republic of China	SAMN05969919	GCA_001866335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/335/GCA_001866335.1_ASM186633v1	-	RB51-AHVLA
Xanthomonas citri subsp. citri	611301	PRJNA255042	255042	Proteobacteria	Gammaproteobacteria	5.27407	64.6	-	JPLN01	29	4817	4439	3/11/15	4/3/17	Contig	"Citrus Research and Education center, Univerisity of Florida"	SAMN02911852	GCA_000950845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/845/GCA_000950845.1_ASM95084v1	25689023	AS270
Xanthomonas oryzae pv. oryzae	64187	PRJNA269439	269439	Proteobacteria	Gammaproteobacteria	4.22793	63.9	-	JXFJ01	419	4148	3401	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252514	GCA_001928515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/515/GCA_001928515.1_ASM192851v1	-	DXO-248
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.97416	37.8	-	MLLC01	544	2017	1661	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297016	GCA_001868125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/125/GCA_001868125.1_ASM186812v1	27118061	AWRIB128
Vibrio parahaemolyticus VP2007-095	1238193	PRJNA176627	176627	Proteobacteria	Gammaproteobacteria	5.17586	45.3	-	AVOI01	21	5040	4742	8/22/13	3/24/17	Contig	IGS	SAMN02183022	GCA_000454165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/165/GCA_000454165.1_ASM45416v1	-	VP2007-095
Bacillus subtilis	1423	PRJNA271049	271049	Terrabacteria group	Firmicutes	4.35656	42.9	-	JXBC01	14	4690	4209	2/19/15	4/10/17	Contig	Inner Mongolia Agricultural University	SAMN03272541	GCA_000878265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/265/GCA_000878265.1_ASM87826v1	-	HM-66
Staphylococcus aureus	1280	PRJNA305475	305475	Terrabacteria group	Firmicutes	2.78249	32.9943	chromosome:NZ_CP013616.1/CP013616.1; plasmid pRIVM1295-1:NZ_CP013617.1/CP013617.1; plasmid pRIVM1295-2:NZ_CP013618.1/CP013618.1	-	3	2858	2673	12/14/15	3/5/17	Complete Genome	RIVM	SAMN04325935	GCA_001465635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/465/635/GCA_001465635.1_ASM146563v1	27129960	RIVM1295
Clostridium botulinum	1491	PRJNA266242	266242	Terrabacteria group	Firmicutes	3.79222	28.1	-	LAGJ01	248	3620	1887	3/27/15	3/25/17	Contig	Centers for Disease Control and Prevention	SAMN03169471	GCA_000965445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/445/GCA_000965445.1_ASM96544v1	-	CDC41370NT
Enterococcus faecalis EnGen0059	1151192	PRJNA85635	85635	Terrabacteria group	Firmicutes	3.20032	37.2	-	AIIQ01	11	3237	3029	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00792323	GCA_000390625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/625/GCA_000390625.1_Ente_faec_C_19315_led_1b_pp_SCV_V1	-	C 19315 led 1b pp (SCV)
Streptococcus mutans NFSM2	857141	PRJNA49781	49781	Terrabacteria group	Firmicutes	1.99098	36.6	-	AHRV01	115	1984	1905	2/11/13	3/23/17	Contig	Cornell University	SAMN02428986	GCA_000339295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/295/GCA_000339295.1_ASM33929v1	23228887	NFSM2
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.09515	52.6	-	CQJO01	76	2468	2146	3/22/15	4/11/17	Contig	SC	SAMEA1690379	GCA_001099005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/005/GCA_001099005.1_8289_2_9	-	GCGS009
Enterococcus faecium EnGen0022	1138883	PRJNA82417	82417	Terrabacteria group	Firmicutes	2.75227	38.4	-	AHWK01	13	2739	2496	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779833	GCA_000321525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/525/GCA_000321525.1_Ente_faec_E0269_V1	-	E0269
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.37901	66.9	-	JVWJ01	352	4064	3855	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197233	GCA_001069435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/435/GCA_001069435.1_ASM106943v1	26230489	1265_SMAL
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15976	41.1	-	CVZP01	76	2102	1924	6/23/15	3/26/17	Contig	SC	SAMEA1032860	GCA_001176765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/765/GCA_001176765.1_6903_2_20	-	EQUI0069
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.29412	40.3	-	LQGN01	31	2157	2056	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366587	GCA_001931145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/145/GCA_001931145.1_ASM193114v1	-	69APM
Lactobacillus rhamnosus	47715	PRJNA378124	378124	Terrabacteria group	Firmicutes	2.88955	46.7	-	MWVF01	26	2890	2729	3/14/17	3/16/17	Contig	The University of Hong Kong	SAMN06480070	GCA_002027355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/355/GCA_002027355.1_ASM202735v1	-	R709
Brucella melitensis M5	1286630	PRJNA187210	187210	Proteobacteria	Alphaproteobacteria	3.28992	57.3	-	AONT01	91	3382	3136	3/22/13	4/1/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02470637	GCA_000348645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/645/GCA_000348645.1_MD5v1	23967122	M5
Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2	511995	PRJDA29025	29025	FCB group	Bacteroidetes/Chlorobi group	1.22492	32.9857	chromosome:NC_011565.1/AP010656.1; plasmid pCFPG1:NC_011564.1/AP010657.1; plasmid pCFPG2:NC_011561.1/AP010658.1; plasmid pCFPG3:NC_011562.1/AP010659.1; plasmid pCFPG4:NC_011563.1/AP010660.1	-	5	1042	968	11/13/08	4/17/17	Complete Genome	RIKEN Genomic Sciences Center (GSC)	SAMD00060940	GCA_000010645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/645/GCA_000010645.1_ASM1064v1	19008447	-
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.45392	53.5	-	LSVS01	37	2368	2197	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496962	GCA_002202445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/445/GCA_002202445.1_S35	-	822
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.44117	46.9	-	CPWJ01	121	4156	3930	3/22/15	3/26/17	Scaffold	SC	SAMEA980215	GCA_001120245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/245/GCA_001120245.1_4976_3_9	-	ERL083523
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.25014	59.5	-	JWBL01	226	5094	4888	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197101	GCA_001060335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/335/GCA_001060335.1_ASM106033v1	26230489	1145_SMAR
Lactobacillus plantarum	1590	PRJNA314097	314097	Terrabacteria group	Firmicutes	3.24801	44.4	-	LUWY01	78	3185	2974	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04528826	GCA_001633565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/565/GCA_001633565.1_ASM163356v1	-	Nizo2801
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64308	31.4	-	CUJR01	10	1693	1613	3/31/15	3/18/17	Contig	SC	SAMEA1010507	GCA_001226885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/885/GCA_001226885.1_7038_3_59	-	OXC6309
Burkholderia sp. AU15512	2015345	PRJNA391085	391085	Proteobacteria	Betaproteobacteria	8.21022	66.9	-	NKEX01	23	7484	7198	7/20/17	7/22/17	Contig	University of Michigan	SAMN07257380	GCA_002223325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/325/GCA_002223325.1_ASM222332v1	-	AU15512
Cutibacterium acnes	1747	PRJNA323688	323688	Terrabacteria group	Actinobacteria	2.4614	60	-	LYYA01	96	2510	2334	6/8/16	4/5/17	Contig	Aarhus University	SAMN05207570	GCA_001660115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/115/GCA_001660115.1_ASM166011v1	-	50.1.L1
Staphylococcus haemolyticus	1283	PRJNA319366	319366	Terrabacteria group	Firmicutes	2.67412	33.1	-	MIZW01	559	2506	2341	9/24/16	3/28/17	Contig	"Jet Propulsion Laboratory, California Institute of Technology"	SAMN04902361	GCA_001743425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/743/425/GCA_001743425.1_ASM174342v1	-	IIF2SW-P5
Enterobacter cloacae	550	PRJNA299115	299115	Proteobacteria	Gammaproteobacteria	4.99766	54.7	-	LLXN01	175	4904	4619	11/9/15	3/27/17	Contig	"Nottingham Trent University, UK"	SAMN04193740	GCA_001441705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/705/GCA_001441705.1_ASM144170v1	-	8706
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.49871	56.9	-	NEYB01	108	4365	4155	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN04329641	GCA_002198825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/825/GCA_002198825.1_ASM219882v1	-	MOD1-comp49b
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.90242	64.1	-	CSTZ01	14	4882	4739	3/24/15	3/18/17	Contig	SC	SAMEA1464863	GCA_001213985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/985/GCA_001213985.1_7396_6_62	-	PAP014
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.13964	67.5	-	LPBW01	95	6405	6090	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449385	GCA_001528025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/025/GCA_001528025.1_ASM152802v1	-	MSMB2007WGS
Acinetobacter pittii	48296	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.93283	38.7	-	MSMX01	79	3843	3640	3/3/17	3/6/17	Contig	JCVI	SAMN06117711	GCA_002014165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/165/GCA_002014165.1_ASM201416v1	-	ABUH411
Citrobacter freundii	546	PRJNA379205	379205	Proteobacteria	Gammaproteobacteria	4.9796	51.8	-	MZZE01	48	4950	4473	3/21/17	3/21/17	Contig	University of Dhaka	SAMN06603405	GCA_002051555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/555/GCA_002051555.1_ASM205155v1	-	NR-12
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.67328	55.3	-	JZXV01	73	4623	4388	3/19/15	3/25/17	Contig	JCVI	SAMN03283690	GCA_000958365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/365/GCA_000958365.1_ASM95836v1	-	44527
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.3144	55	-	LVUY01	87	5297	5006	4/25/16	4/6/17	Contig	JCVI	SAMN04572700	GCA_001631605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/605/GCA_001631605.1_ASM163160v1	-	GN06193
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.87118	64.1	-	FVOQ01	60	4790	4620	3/10/17	3/18/17	Scaffold	SC	SAMEA2275748	GCA_900137195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/195/GCA_900137195.1_12082_5_65	-	1022
Burkholderia cepacia	292	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.29049	66.7	-	LPGF01	49	6824	6509	1/22/16	4/4/17	Contig	Northern Arizona University	SAMN03449505	GCA_001536795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/795/GCA_001536795.1_ASM153679v1	-	MSMB1533WGS
Pseudomonas sp. HMSC065H01	1739516	PRJNA300167	300167	Proteobacteria	Gammaproteobacteria	6.94972	66	-	LTTI01	121	6762	6507	10/17/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04480432	GCA_001815235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/235/GCA_001815235.1_ASM181523v1	-	HMSC065H01
Streptomyces sp. CT34	1553907	PRJNA263121	263121	Terrabacteria group	Actinobacteria	8.06643	71.3	-	JSFP01	16	7153	6511	12/19/14	3/11/17	Scaffold	Wuhan university	SAMN03144576	GCA_000805335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/335/GCA_000805335.1_ASM80533v1	25657278	CT34
Bacillus sp. MSP5.4	1071069	PRJNA271206	271206	Terrabacteria group	Firmicutes	4.34485	45.9	-	JXAP01	35	4375	4163	1/6/15	4/10/17	Contig	Directorate of Groundnut Research (Indian Council of Agricultural Research)	SAMN03273303	GCA_000815365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/365/GCA_000815365.1_ASM81536v1	-	MSP5.4
Acinetobacter sp. 694762	1310705	PRJNA194781	194781	Proteobacteria	Gammaproteobacteria	4.08567	38.8	-	JFEV01	136	4099	3703	3/3/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02404538	GCA_000584255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/255/GCA_000584255.1_ASM58425v1	-	694762
Sphingomonas sp. STIS6.2	1379700	PRJNA237316	237316	Proteobacteria	Alphaproteobacteria	3.99093	64.8	-	JPDP01	808	4021	3149	7/22/14	4/9/17	Scaffold	Leibniz-Institute of Freshwater Ecology and Inland Fisheries	SAMN02297496	GCA_000732685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/685/GCA_000732685.1_ASM73268v1	-	STIS6.2
Clostridium sp. CAG:710	1262833	PRJEB985	206738	Terrabacteria group	Firmicutes	1.15261	27.2	-	CBAJ01	32	1204	1170	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138517	GCA_000432595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/595/GCA_000432595.1_MGS710	-	-
Rhodococcus sp. 15-649-1-2	2023141	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.78425	64.6	-	NPFN01	42	5393	5269	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07414581	GCA_002258685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/685/GCA_002258685.1_ASM225868v1	-	15-649-1-2
Enterobacter cloacae complex sp. GN02283	1659706	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.79653	55.9	-	LEEJ01	39	4669	4494	6/9/15	4/10/17	Contig	JCVI	SAMN03732693	GCA_001023305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/305/GCA_001023305.1_ASM102330v1	-	GN02283
Staphylococcus sp. HMSC035D11	1715126	PRJNA296254	296254	Terrabacteria group	Firmicutes	2.20146	31.3	-	LTRR01	88	2164	2059	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498624	GCA_001836075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/075/GCA_001836075.1_ASM183607v1	-	HMSC035D11
Corynebacterium sp. HMSC036D02	1715013	PRJNA296524	296524	Terrabacteria group	Actinobacteria	2.63943	60.9	-	LTRL01	61	2465	2340	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498670	GCA_001836165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/165/GCA_001836165.1_ASM183616v1	-	HMSC036D02
Streptococcus sp. HMSC078E03	1715186	PRJNA296314	296314	Terrabacteria group	Firmicutes	2.14012	35.1	-	LTOA01	44	2191	2106	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498653	GCA_001838105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/105/GCA_001838105.1_ASM183810v1	-	HMSC078E03
Mycobacterium sp. E3298	1856865	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.93149	67.6	-	LZJB01	628	5779	5141	6/17/16	4/13/17	Contig	JCVI	SAMN05202174	GCA_001666895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/895/GCA_001666895.1_ASM166689v1	-	E3298
Prevotella sp. UBA1395	1947085	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.58566	52.6	-	DBQL01	235	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452366	GCA_002305235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/235/GCA_002305235.1_ASM230523v1	28894102	-
Paenibacillus sp. OV219	1884377	PRJEB16905	351059	Terrabacteria group	Firmicutes	6.10422	50.4	-	FOCJ01	38	5669	5450	10/29/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05518847	GCA_900110075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/075/GCA_900110075.1_IMG-taxon_2690315629_annotated_assembly	-	OV219
Prochlorococcus sp. scB245a_518K17	1471507	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.40516	31.3	-	JFNF01	335	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671378	GCA_000635115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/115/GCA_000635115.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. P090	1895620	PRJNA341038	341038	Proteobacteria	delta/epsilon subdivisions	1.6577	33.4	-	MJKY01	25	1709	1623	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687058	GCA_002139705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/705/GCA_002139705.1_ASM213970v1	28854596	P090
Rhizobium sp. Root651	1736577	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	5.80468	59.4	-	LMHB01	33	5682	5437	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155846	GCA_001427625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/625/GCA_001427625.1_Root651	26633631	Root651
Mesorhizobium sp. YR577	1884373	PRJEB17573	352000	Proteobacteria	Alphaproteobacteria	6.82479	61.2	-	FPBI01	75	6469	6216	11/2/16	8/3/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05518861	GCA_900116595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/595/GCA_900116595.1_IMG-taxon_2687453760_annotated_assembly	-	YR577
Microbacterium sp. UBA837	1946956	PRJNA348753	348753	Terrabacteria group	Actinobacteria	3.07905	66.5	-	DBHD01	221	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455832	GCA_002296025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/025/GCA_002296025.1_ASM229602v1	28894102	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.80338	57	-	FXSB01	105	5882	5512	4/28/17	5/6/17	Scaffold	SC	SAMEA2609550	GCA_900182085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/182/085/GCA_900182085.1_14936_2_61	-	3189STDY5864914
Staphylococcus argenteus	985002	PRJEB20633	390605	Terrabacteria group	Firmicutes	2.73968	32.3	-	FXVI01	191	2698	2497	6/15/17	7/5/17	Scaffold	Geogentics	SAMEA104034171	GCA_900183735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/735/GCA_900183735.1_M4185	-	-
Staphylococcus argenteus	985002	PRJEB20633	390605	Terrabacteria group	Firmicutes	2.74103	32.2	-	FXVR01	189	2688	2502	6/15/17	7/5/17	Scaffold	Geogentics	SAMEA104034169	GCA_900183755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/755/GCA_900183755.1_M4146	-	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.5567	57.5	-	FXSJ01	75	5601	5270	4/28/17	5/6/17	Scaffold	SC	SAMEA2609554	GCA_900182125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/182/125/GCA_900182125.1_14936_2_63	-	3189STDY5864916
Microbacterium sp. UBA1097	1946941	PRJNA348753	348753	Terrabacteria group	Actinobacteria	3.20396	66.6	-	DCBW01	70	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06457033	GCA_002313585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/585/GCA_002313585.1_ASM231358v1	28894102	-
Mesorhizobium sp. ICMP 18942	1208188	PRJEB21925	398785	Proteobacteria	Alphaproteobacteria	8.57585	62.4	-	FZQR01	233	8472	7803	8/15/17	8/28/17	Contig	MURDOCH UNIVERSITY	SAMEA104174102	GCA_900199455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/199/455/GCA_900199455.1_ICMP_18942	-	-
Rhizobium sp. Root73	1736596	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	6.31401	59.4	-	LMIF01	34	6024	5793	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155865	GCA_001429075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/075/GCA_001429075.1_Root73	26633631	Root73
Campylobacter sp. P162	1895629	PRJNA341047	341047	Proteobacteria	delta/epsilon subdivisions	1.63213	33.5	-	MJLH01	28	1671	1591	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687067	GCA_002139735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/735/GCA_002139735.1_ASM213973v1	28854596	P162
Prochlorococcus sp. scB245a_518O7	1471508	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.46999	31.2	-	JFNG01	231	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671379	GCA_000635135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/135/GCA_000635135.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Paenibacillus sp. BC26	1881032	PRJEB17552	352021	Terrabacteria group	Firmicutes	7.19514	50.6	-	FPAD01	13	6342	6191	11/2/16	8/3/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428962	GCA_900116125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/125/GCA_900116125.1_IMG-taxon_2690315656_annotated_assembly	-	BC26
Prevotella sp. UBA1378	1947084	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.74015	52.5	-	DBRC01	83	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452610	GCA_002305505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/305/505/GCA_002305505.1_ASM230550v1	28894102	-
Mycobacterium sp. E3339	1834146	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.30728	68.8	-	LZIZ01	258	5119	4745	6/17/16	4/13/17	Contig	JCVI	SAMN04634240	GCA_001666915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/915/GCA_001666915.1_ASM166691v1	-	E3339
Streptococcus sp. HMSC078E08	1715102	PRJNA296230	296230	Terrabacteria group	Firmicutes	2.0954	35.4	-	LTNZ01	35	2140	2057	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498610	GCA_001838125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/125/GCA_001838125.1_ASM183812v1	-	HMSC078E08
Corynebacterium sp. HMSC036D03	1715171	PRJNA296299	296299	Terrabacteria group	Actinobacteria	2.65213	59.1	-	LTRK01	62	2517	2381	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498649	GCA_001836185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/185/GCA_001836185.1_ASM183618v1	-	HMSC036D03
Staphylococcus sp. HMSC035F01	1715068	PRJNA296196	296196	Terrabacteria group	Firmicutes	2.7942	32.7	-	LTRP01	60	2917	2799	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498596	GCA_001836085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/085/GCA_001836085.1_ASM183608v1	-	HMSC035F01
Enterobacter sp. ST121:950178628	1903134	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.31988	54.6	-	LJDO02	138	5338	5039	10/15/15	4/13/17	Contig	University of KwaZulu Natal	SAMN04011422	GCA_001316805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/805/GCA_001316805.2_ASM131680v2	-	ST121:950178628
Rhodococcus sp. 15-1154-1	2023144	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.98485	64.5	-	NPFR01	47	5614	5438	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07414577	GCA_002258715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/715/GCA_002258715.1_ASM225871v1	-	15-1154-1
Clostridium sp. CAG:417	1262804	PRJEB874	206796	Terrabacteria group	Firmicutes	1.2679	27.7	-	CBFQ01	13	1323	1291	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138529	GCA_000432835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/835/GCA_000432835.1_MGS417	-	-
Sphingomonas sp. FUKUSWIS1	1379701	PRJNA237318	237318	Proteobacteria	Alphaproteobacteria	3.88766	66.1	-	JPJC01	285	3655	3271	7/24/14	4/9/17	Scaffold	Leibniz-Institute of Freshwater Ecology and Inland Fisheries	SAMN02297495	GCA_000733135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/733/135/GCA_000733135.1_ASM73313v1	25395647	FUKUSWIS1
Acinetobacter sp. 1245249	1310724	PRJNA194800	194800	Proteobacteria	Gammaproteobacteria	3.96285	38.9	-	JFDY01	225	3873	3569	3/3/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02404487	GCA_000584575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/575/GCA_000584575.1_ASM58457v1	-	1245249
Bacillus sp. A053	1590027	PRJNA271178	271178	Terrabacteria group	Firmicutes	4.13931	43.9	-	JXAJ01	5	4234	4026	1/16/15	4/10/17	Contig	"Third Institute of Oceanography, State Oceanic Administration"	SAMN03273270	GCA_000819585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/585/GCA_000819585.1_ASM81958v1	-	A053
Streptomyces sp. NBRC 110035	1547867	PRJDB3149	271759	Terrabacteria group	Actinobacteria	7.50893	71.8	-	BBNN01	89	6694	6025	1/6/15	3/11/17	Scaffold	National Institute of Technology and Evaluation	SAMD00020221	GCA_000829695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/695/GCA_000829695.1_ASM82969v1	25700394	NBRC 110035
Pseudomonas sp. HMSC057H01	1715060	PRJNA296188	296188	Proteobacteria	Gammaproteobacteria	6.6854	66.1	-	LTQZ01	156	6445	6183	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498587	GCA_001836405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/405/GCA_001836405.1_ASM183640v1	-	HMSC057H01
Burkholderia cepacia	292	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	8.61589	66.6	-	JWAO01	824	8277	7553	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197124	GCA_001053975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/975/GCA_001053975.1_ASM105397v1	26230489	1167_BCEN
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96041	64.1	-	FVPE01	15	4911	4756	3/10/17	3/18/17	Scaffold	SC	SAMEA2275782	GCA_900137535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/535/GCA_900137535.1_12163_2_29	-	1056
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.4096	54.8	-	LVUC01	197	5482	4990	4/25/16	4/6/17	Contig	JCVI	SAMN04572601	GCA_001631645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/645/GCA_001631645.1_ASM163164v1	-	GN05388
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.34987	55	-	JZXU01	145	5375	5079	3/19/15	3/25/17	Contig	JCVI	SAMN03283664	GCA_000958385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/385/GCA_000958385.1_ASM95838v1	-	44541
Acinetobacter pittii	48296	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.95647	38.7	-	MSOC01	34	3784	3663	3/3/17	3/6/17	Contig	JCVI	SAMN06117743	GCA_002016895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/895/GCA_002016895.1_ASM201689v1	-	ABUH540
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.07463	67.5	-	LPAN01	91	6421	6054	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449350	GCA_001528065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/065/GCA_001528065.1_ASM152806v1	-	MSMB1603WGS
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.09186	64.2	-	CSWN01	36	5046	4897	3/24/15	3/18/17	Contig	SC	SAMEA1464964	GCA_001214625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/625/GCA_001214625.1_7396_7_37	-	PAP085
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.54021	56.8	-	NEYD01	135	4427	4189	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN04329643	GCA_002198855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/855/GCA_002198855.1_ASM219885v1	-	MOD1-comp54a
Klebsiella oxytoca	571	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	5.8784	55.9	-	DFVS01	32	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454005	GCA_002380085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/085/GCA_002380085.1_ASM238008v1	28894102	-
Enterobacter cloacae subsp. cloacae	336306	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.29651	54.3	-	LPQI01	131	5210	4883	12/21/15	3/27/17	Contig	JCVI	SAMN04252900	GCA_001472135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/135/GCA_001472135.1_SMART_313.v1	-	SMART_313
Staphylococcus haemolyticus	1283	PRJNA326799	326799	Terrabacteria group	Firmicutes	2.5209	32.7	-	MAUC01	110	2503	2331	10/11/16	3/28/17	Contig	Christian Medical College	SAMN05292878	GCA_001756685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/685/GCA_001756685.1_ASM175668v1	-	VB31546
Cutibacterium acnes	1747	PRJNA323688	323688	Terrabacteria group	Actinobacteria	2.47076	60	-	LZCJ01	63	2508	2362	6/10/16	4/5/17	Contig	Aarhus University	SAMN05185370	GCA_001660855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/855/GCA_001660855.1_ASM166085v1	-	51.1.L1
Burkholderia sp. AU16741	2015347	PRJNA391085	391085	Proteobacteria	Betaproteobacteria	7.29344	66.9	-	NKEZ01	34	6757	6338	7/20/17	7/22/17	Contig	University of Michigan	SAMN07257382	GCA_002223345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/345/GCA_002223345.1_ASM222334v1	-	AU16741
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70725	31.1	-	CUMY01	23	1781	1632	3/31/15	3/18/17	Contig	SC	SAMEA1010667	GCA_001226985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/985/GCA_001226985.1_7065_7_49	-	OXC6395
Lactobacillus plantarum	1590	PRJNA314101	314101	Terrabacteria group	Firmicutes	3.35213	44.3	-	LUXB01	110	3244	3073	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04528840	GCA_001633575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/575/GCA_001633575.1_ASM163357v1	-	Nizo2814
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.12689	59.9	-	JVYI01	154	4805	4650	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197182	GCA_001060585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/585/GCA_001060585.1_ASM106058v1	26230489	1218_SMAR
Yersinia enterocolitica	630	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	4.46669	46.9	-	CPYE01	145	4246	3962	3/23/15	3/26/17	Scaffold	SC	SAMEA1486440	GCA_001124705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/705/GCA_001124705.1_8016_2_74	-	IP29610
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.43088	53.6	-	LSVZ01	32	2378	2189	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496970	GCA_002202495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/495/GCA_002202495.1_S44	-	1360
Methanococcus maripaludis C5	402880	PRJNA17641	17641	Euryarchaeota	Methanococci	1.78905	32.9731	chromosome:NC_009135.1/CP000609.1; plasmid pMMC501:NC_009136.1/CP000610.1	-	2	1897	1820	3/15/07	4/6/17	Complete Genome	DOE Joint Genome Institute	SAMN02598397	GCA_000016125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/125/GCA_000016125.1_ASM1612v1	-	C5
Brucella melitensis F15/06-7	1244532	PRJNA178707	178707	Proteobacteria	Alphaproteobacteria	3.30054	57.2	-	AQID01	12	3378	3124	4/16/13	4/1/17	Contig	Broad Institute	SAMN01798237	GCA_000365845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/845/GCA_000365845.1_Bruc_meli_F15_06-7_V1	-	F15/06-7
Lactobacillus rhamnosus	47715	PRJNA286713	286713	Terrabacteria group	Firmicutes	2.87885	46.7	-	LPNU01	66	2952	2707	4/21/17	4/24/17	Contig	University of Helsinki	SAMN03769470	GCA_002103155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/155/GCA_002103155.1_ASM210315v1	-	Lrh38
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.28339	40.2	-	LQGO01	41	2164	2070	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366588	GCA_001931155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/155/GCA_001931155.1_ASM193115v1	-	654BPM
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15968	41.1	-	CWAK01	80	2101	1928	6/24/15	3/26/17	Contig	SC	SAMEA1032861	GCA_001176785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/785/GCA_001176785.1_6903_3_35	-	EQUI0084
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.92431	66.3	-	JVUS01	319	4614	4455	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197276	GCA_001069555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/555/GCA_001069555.1_ASM106955v1	26230489	1303_SMAL
Enterococcus faecium EnGen0013	1138884	PRJNA82419	82419	Terrabacteria group	Firmicutes	2.7725	38	-	AHWL01	27	2833	2648	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779844	GCA_000321545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/545/GCA_000321545.1_Ente_faec_E0333_V1	-	E0333
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.0996	52.6	-	CQMA01	72	2467	2137	3/22/15	4/11/17	Contig	SC	SAMEA1677449	GCA_001099505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/505/GCA_001099505.1_8727_5_78	-	GCGS228
Streptococcus mutans A9	857139	PRJNA49785	49785	Terrabacteria group	Firmicutes	1.86849	36.8	-	AHRX01	105	1869	1779	2/11/13	3/23/17	Contig	Cornell University	SAMN02429025	GCA_000339315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/315/GCA_000339315.1_ASM33931v1	23228887	A9
Enterococcus faecalis EnGen0076	1151193	PRJNA85637	85637	Terrabacteria group	Firmicutes	2.90365	37.4	-	AIIR01	6	2940	2783	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00792324	GCA_000390645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/645/GCA_000390645.1_Ente_faec_1448E03_V1	-	1.45E+06
Clostridium botulinum	1491	PRJNA266242	266242	Terrabacteria group	Firmicutes	4.08185	28.1	-	LAGO01	798	3790	2092	3/27/15	4/10/17	Contig	Centers for Disease Control and Prevention	SAMN03394942	GCA_000965515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/515/GCA_000965515.1_ASM96551v1	-	CDC66221
Lactobacillus salivarius	1624	PRJNA242957	242957	Terrabacteria group	Firmicutes	2.32046	32.9696	chromosome:NZ_CP007646.1/CP007646.1; plasmid pCTN1046:NZ_CP007650.1/CP007650.1; plasmid pLMP1046:NZ_CP007649.1/CP007649.1; plasmid pMP1046A:NZ_CP007647.1/CP007647.1; plasmid pMP1046B:NZ_CP007648.1/CP007648.1	-	5	2321	2083	9/26/14	4/2/17	Complete Genome	University College Cork	SAMN02711722	GCA_000758365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/365/GCA_000758365.1_ASM75836v1	25201645	JCM1046
Bacillus subtilis subsp. spizizenii RFWG1A3	932006	PRJNA60737	60737	Terrabacteria group	Firmicutes	4.06399	43.7	-	AJHL01	25	4177	3897	2/23/15	3/25/17	Contig	Wesleyan University	SAMN01985722	GCA_000931815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/815/GCA_000931815.1_G1A3	-	RFWG1A3
Vibrio parahaemolyticus VP232	1238209	PRJNA176644	176644	Proteobacteria	Gammaproteobacteria	5.12396	45.4	-	AVOJ01	52	4961	4666	8/22/13	3/24/17	Contig	IGS	SAMN02190056	GCA_000454185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/185/GCA_000454185.1_ASM45418v1	-	VP232
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.92429	37.9	-	MLLE01	329	1990	1740	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297018	GCA_001868145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/145/GCA_001868145.1_ASM186814v1	27118061	AWRIB131
Xanthomonas oryzae pv. oryzae	64187	PRJNA269436	269436	Proteobacteria	Gammaproteobacteria	4.3808	63.9	-	JXFG01	472	4315	3496	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252541	GCA_001928525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/525/GCA_001928525.1_ASM192852v1	-	DXO-233
Xanthomonas citri subsp. citri	611301	PRJNA255042	255042	Proteobacteria	Gammaproteobacteria	5.30331	64.6	-	JPLP01	31	4845	4450	3/11/15	4/3/17	Contig	"Citrus Research and Education center, Univerisity of Florida"	SAMN02911854	GCA_000950855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/855/GCA_000950855.1_AS9_assembly	25689023	AS9
Brucella abortus str. 2308 A	641140	PRJNA37723	37723	Proteobacteria	Alphaproteobacteria	3.2772	57.2	-	ACOR01	9	3377	3156	5/19/09	3/22/17	Contig	Virginia Bioinformatics Institute	SAMN02472082	GCA_000182625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/182/625/GCA_000182625.1_ASM18262v1	-	2308 A
Francisella tularensis subsp. holarctica	119857	PRJNA286987	286987	Proteobacteria	Gammaproteobacteria	1.78689	32.2	-	MQVD01	106	1837	1556	3/15/17	7/3/17	Contig	Spiez Laboratory	SAMN03774936	GCA_002027745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/745/GCA_002027745.1_ASM202774v1	28348839	FT9C-G7
Clostridioides difficile CD133	1151288	PRJNA85749	85749	Terrabacteria group	Firmicutes	4.10712	28.2	-	AVHS01	123	3811	3625	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766587	GCA_000449345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/345/GCA_000449345.2_ASM44934v2	-	CD133
Vibrio cholerae HC-02C1	991949	PRJNA63905	63905	Proteobacteria	Gammaproteobacteria	3.93558	47.8	-	AJSH01	121	3733	3525	10/15/12	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00752544	GCA_000305525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/525/GCA_000305525.2_ASM30552v2	-	HC-02C1
Bacillus thuringiensis serovar pingluonsis	180881	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.3828	34.9	-	NFDL01	135	6816	6295	5/17/17	6/16/17	Contig	Huazhong Agricultural University	SAMN05934532	GCA_002146825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/825/GCA_002146825.1_ASM214682v1	-	BGSC 4BX1
Chlamydia trachomatis E/C599	1100832	PRJEA74569	74569	PVC group	Chlamydiae	1.04263	41.3	chromosome:NC_022537.1/HE605379.1	-	1	966	899	10/10/13	3/26/17	Chromosome	Wellcome Trust Sanger Institute	SAMEA4532334	GCA_000969785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/785/GCA_000969785.1_ASM96978v1	-	E/C599
Burkholderia pseudomallei 406e	360118	PRJNA16231	16231	Proteobacteria	Betaproteobacteria	7.33982	68	-	AAMM02	100	7552	6887	12/15/05	3/24/17	Scaffold	TIGR	SAMN02435889	GCA_000152685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/685/GCA_000152685.2_ASM15268v2	-	406e
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.45434	67.1	-	MUSM01	165	8019	7483	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001878	GCA_001992195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/195/GCA_001992195.1_ASM199219v1	-	VC12229
Bacteroides fragilis	817	PRJNA267549	267549	FCB group	Bacteroidetes/Chlorobi group	5.262	43.6	-	JUOA01	1290	4807	4251	7/10/15	4/3/17	Contig	University of Washington	SAMN03198125	GCA_001077245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/245/GCA_001077245.1_ASM107724v1	26230489	915_BFRA
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.76743	50.9	-	NQBN01	139	5030	4561	8/11/17	8/15/17	Contig	JCVI	SAMN07450641	GCA_002247605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/605/GCA_002247605.1_ASM224760v1	-	ECLC+07
Legionella pneumophila	446	PRJNA281144	281144	Proteobacteria	Gammaproteobacteria	3.38633	38.2	-	LBAA01	30	3090	2939	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03483307	GCA_001582405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/405/GCA_001582405.1_ASM158240v1	26888563	FS_10_1101a-3
Pseudomonas syringae	317	PRJNA255815	255815	Proteobacteria	Gammaproteobacteria	5.81617	57.8	-	JPQU01	109	5210	5054	8/1/14	3/24/17	Contig	University of Arizona	SAMN02929200	GCA_000737245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/245/GCA_000737245.1_GAW0119_1.0_311105	-	GAW0119
Streptococcus suis YS66	1214214	PRJNA171476	171476	Terrabacteria group	Firmicutes	2.05962	41.2	-	ALNC01	40	2085	1946	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469560	GCA_000441435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/435/GCA_000441435.1_version1	-	YS66
Streptococcus agalactiae GB00932	1154954	PRJNA86581	86581	Terrabacteria group	Firmicutes	1.97791	35.2	-	ALUT01	18	2023	1906	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991363	GCA_000288535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/535/GCA_000288535.1_ASM28853v1	-	GB00932
Acinetobacter baumannii NIPH 60	1217647	PRJNA183299	183299	Proteobacteria	Gammaproteobacteria	3.98125	39.3	-	APPM01	33	3848	3583	4/16/13	3/15/17	Scaffold	Broad Institute	SAMN01087913	GCA_000368545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/368/545/GCA_000368545.1_Acin_baum_NIPH_60_V1	-	NIPH 60
Staphylococcus aureus subsp. aureus JH1	359787	PRJNA15758	15758	Terrabacteria group	Firmicutes	2.93694	32.9648	chromosome:NC_009632.1/CP000736.1; plasmid pSJH101:NC_009619.1/CP000737.1	-	2	3096	2934	6/28/07	3/2/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598344	GCA_000017125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/125/GCA_000017125.1_ASM1712v1	-	JH1
Shigella flexneri	623	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.16482	50.5	-	NIYQ01	175	5474	4998	9/12/17	9/14/17	Contig	JCVI	SAMN07203027	GCA_002290415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/415/GCA_002290415.1_ASM229041v1	-	CTRSIUE-6
Bacillus anthracis	1392	PRJNA257008	257008	Terrabacteria group	Firmicutes	5.45962	35.1	-	LFYI01	31	6125	5754	8/21/15	3/26/17	Contig	µFORGE	SAMN03757457	GCA_001273045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/045/GCA_001273045.1_BANT008-SEQ-1-ASM-1	-	K0021
Leptospira interrogans serovar Copenhageni str. 2006006972	1291315	PRJNA188966	188966	Spirochaetes	Spirochaetia	4.59731	35	-	AOWX01	161	4104	3725	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920629	GCA_000343475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/475/GCA_000343475.1_CA_glsol036	-	2006006972
Streptococcus pyogenes ABC020054955	1439245	PRJNA233194	233194	Terrabacteria group	Firmicutes	1.89141	38.6	-	JJGH01	5	1960	1838	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567543	GCA_000630285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/285/GCA_000630285.1_Stre_pyog_ABC020054955_V1	-	ABC020054955
Neisseria meningitidis	487	PRJNA244817	244817	Proteobacteria	Betaproteobacteria	2.11326	51.7	-	JMCX01	89	2451	2081	7/20/15	3/21/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02729199	GCA_001183205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/205/GCA_001183205.1_Nm340552	25989189	340552
Helicobacter pylori	210	PRJDB4296	362565	Proteobacteria	delta/epsilon subdivisions	1.5824	38.8	chromosome:AP017332.1	-	1	1557	1524	1/18/17	1/18/17	Chromosome	"Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture"	SAMD00042466	GCA_002357495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/495/GCA_002357495.1_ASM235749v1	-	F209
Streptococcus pneumoniae SP-BS293	497963	PRJNA28513	28513	Terrabacteria group	Firmicutes	2.06545	39.6	-	ABWU01	30	2248	2002	8/12/10	3/9/17	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393763	GCA_000173295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/295/GCA_000173295.1_ASM17329v1	-	SP-BS293
Staphylococcus aureus	1280	PRJNA300829	300829	Terrabacteria group	Firmicutes	2.97988	32.9643	chromosome:NZ_CP013953.1/CP013953.1; plasmid pNCCP14558:NZ_CP013954.1/CP013954.1	-	2	3133	2913	5/9/16	3/6/17	Complete Genome	Catholic university of Korea	SAMN04219574	GCA_001640905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/905/GCA_001640905.1_ASM164090v1	-	NCCP14558
Mycobacterium tuberculosis TRS11	1334057	PRJNA203169	203169	Terrabacteria group	Actinobacteria	4.41153	65.4	chromosome:NZ_CP009197.1/CP009197.1	-	1	4299	4057	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837631	GCA_001998585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/585/GCA_001998585.1_ASM199858v1	27261264	TRS11
Haemophilus influenzae	727	PRJNA341407	341407	Proteobacteria	Gammaproteobacteria	1.83913	37.9	-	MTGI01	48	1852	1713	2/13/17	2/22/17	Scaffold	California Department of Public Health	SAMN05721784	GCA_001997355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/355/GCA_001997355.1_ASM199735v1	-	ATCC 10211
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.1921	69.1	-	BDNL01	419	5022	4646	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076662	GCA_002089435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/435/GCA_002089435.1_ASM208943v1	28045086	IH-550
Lactococcus lactis	1358	PRJNA375758	375758	Terrabacteria group	Firmicutes	2.70528	35	-	NCWV01	193	2760	2540	8/29/17	8/30/17	Contig	SysMilk	SAMN06718485	GCA_002276665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/665/GCA_002276665.1_ASM227666v1	-	OG2
Bacillus cereus BAG1X1-3	1053172	PRJNA70309	70309	Terrabacteria group	Firmicutes	6.03048	35.2	-	AHCS01	5	6413	5961	8/16/12	6/15/17	Scaffold	Broad Institute	SAMN02596804	GCA_000291055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/055/GCA_000291055.1_Baci_cere_BAG1X1-3_G13172_V1	-	BAG1X1-3
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.61256	31.8	-	JWGL01	143	2573	2467	7/10/15	3/26/17	Contig	University of Washington	SAMN03196971	GCA_001068455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/455/GCA_001068455.1_ASM106845v1	26230489	101_SEPI
Staphylococcus aureus CA-347	1323661	PRJNA197422	197422	Terrabacteria group	Firmicutes	2.87516	32.9631	chromosome:NC_021554.1/CP006044.1; plasmid unnamed:NC_021552.1/CP006045.1	-	2	2994	2809	6/20/13	3/2/17	Complete Genome	TGen North	SAMN02603909	GCA_000412775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/775/GCA_000412775.1_ASM41277v1	23887918	CA-347
Pseudomonas fluorescens	294	PRJNA276971	276971	Proteobacteria	Gammaproteobacteria	6.8991	58.8	-	LACH01	168	6298	6101	4/1/15	4/3/17	Scaffold	University of Copenhagen	SAMN03382614	GCA_000968015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/015/GCA_000968015.1_ASM96801v1	-	H24
Yersinia pestis biovar Mediaevalis str. K1973002	404216	PRJNA17687	17687	Proteobacteria	Gammaproteobacteria	4.72069	47.6	-	AAYT01	73	4525	4256	3/26/07	5/19/17	Contig	TIGR	SAMN02404402	GCA_000169655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/655/GCA_000169655.1_ASM16965v1	19820101	K1973002
Staphylococcus capitis subsp. capitis	72758	PRJNA232502	232502	Terrabacteria group	Firmicutes	2.50326	32.9357	chromosome:NZ_CP007601.1/CP007601.1; plasmid pAYP1020:NZ_CP007602.1/CP007602.1	-	2	2414	2272	6/12/15	4/3/17	Complete Genome	"Department of Microbiology, Monash University"	SAMN02739579	GCA_001028645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/645/GCA_001028645.1_ASM102864v1	26441910	AYP1020
Lactobacillus salivarius	1624	PRJEB14980	345087	Terrabacteria group	Firmicutes	2.03336	32.9158	chromosome I:NZ_LT604074.1/LT604074.1; plasmid II:NZ_LT604075.1/LT604075.1	-	2	2030	1841	10/1/16	5/31/17	Complete Genome	Wellness Technologies Spa	SAMEA4359642	GCA_900094615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/615/GCA_900094615.1_ASM90009461v1	-	-
Staphylococcus aureus	1280	PRJNA305475	305475	Terrabacteria group	Firmicutes	2.77101	32.9014	chromosome:NZ_CP013619.1/CP013619.1; plasmid pRIVM1607:NZ_CP013620.1/CP013620.1	-	2	2833	2658	12/14/15	3/5/17	Complete Genome	RIVM	SAMN04325938	GCA_001465675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/465/675/GCA_001465675.1_ASM146567v1	27129960	RIVM1607
Flavobacterium branchiophilum FL-15	1034807	PRJNA67123	67123	FCB group	Bacteroidetes/Chlorobi group	3.56329	32.9006	chromosome:NC_016001.1/FQ859183.1; plasmid pFB1:NC_018751.1/FQ859182.1	-	2	3136	3038	9/6/11	4/17/17	Complete Genome	Institut National de la Recherche Agronomique (INRA)	SAMEA3138411	GCA_000253275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/275/GCA_000253275.1_ASM25327v1	21926215	FL-15
Staphylococcus aureus subsp. aureus	46170	PRJNA406184	406184	Terrabacteria group	Firmicutes	2.8789	32.9	chromosome:CP023391.1	-	1	3043	2902	9/18/17	9/18/17	Complete Genome	NYU Langone Health	SAMN07629847	GCA_002310395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/395/GCA_002310395.1_ASM231039v1	-	Newman
Staphylococcus aureus subsp. aureus str. Newman	426430	PRJNA406184	406184	Terrabacteria group	Firmicutes	2.8789	32.9	chromosome:CP023390.1	-	1	3043	2903	9/18/17	9/18/17	Complete Genome	NYU Langone Health	SAMN07629846	GCA_002310435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/435/GCA_002310435.1_ASM231043v1	-	Newman
Yersinia pestis biovar Antiqua str. B42003004	404215	PRJNA17685	17685	Proteobacteria	Gammaproteobacteria	4.84169	47.7	-	AAYU01	69	4605	4343	3/26/07	5/19/17	Contig	TIGR	SAMN02404401	GCA_000169675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/675/GCA_000169675.1_ASM16967v1	19820101	B42003004
Pseudomonas fluorescens	294	PRJNA276807	276807	Proteobacteria	Gammaproteobacteria	6.67941	60.5	-	LACG01	77	6087	5919	4/1/15	4/3/17	Scaffold	University of Copenhagen	SAMN03397783	GCA_000968025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/025/GCA_000968025.1_ASM96802v1	-	H14
Staphylococcus aureus	1280	PRJNA315882	315882	Terrabacteria group	Firmicutes	2.86151	32.9	chromosome:NZ_CP017090.1/CP017090.1	-	1	2944	2785	6/21/17	6/24/17	Complete Genome	USDA-ARS	SAMN04571767	GCA_002204555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/555/GCA_002204555.1_ASM220455v1	-	ISU935
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.54947	31.8	-	JWFS01	143	2487	2403	7/10/15	3/26/17	Contig	University of Washington	SAMN03196990	GCA_001068505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/505/GCA_001068505.1_ASM106850v1	26230489	1026_SEPI
Bacillus cereus HuA4-10	1053206	PRJNA70377	70377	Terrabacteria group	Firmicutes	5.8033	35.3	-	AHEA01	8	6130	5659	8/15/12	6/15/17	Scaffold	Broad Institute	SAMN02596838	GCA_000291075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/075/GCA_000291075.1_Baci_cere_HuA4-10_V1	-	HuA4-10
Lactococcus lactis	1358	PRJNA375758	375758	Terrabacteria group	Firmicutes	2.82367	34.8	-	NCXC01	136	2889	2678	8/29/17	8/30/17	Contig	SysMilk	SAMN06718499	GCA_002276835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/835/GCA_002276835.1_ASM227683v1	-	KR
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.38425	68.9	-	BDNM01	328	5144	4791	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076664	GCA_002089455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/455/GCA_002089455.1_ASM208945v1	28045086	IH-560
Haemophilus influenzae	727	PRJNA338014	338014	Proteobacteria	Gammaproteobacteria	1.80686	37.9	-	NIUV01	35	1761	1617	7/31/17	8/3/17	Scaffold	UW	SAMN07230036	GCA_002237715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/715/GCA_002237715.1_ASM223771v1	-	WAPHL1
Mycobacterium tuberculosis TRS27	1334073	PRJNA203185	203185	Terrabacteria group	Actinobacteria	4.41153	65.3	chromosome:NZ_CP009190.1/CP009190.1	-	1	4299	4060	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837647	GCA_001998645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/645/GCA_001998645.1_ASM199864v1	27261264	TRS27
Staphylococcus aureus	1280	PRJNA362943	362943	Terrabacteria group	Firmicutes	2.74553	32.9	chromosome:NZ_CP019591.1/CP019591.1	-	1	2827	2645	4/13/17	4/17/17	Complete Genome	University of Calgary	SAMN06251153	GCA_002089035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/035/GCA_002089035.1_ASM208903v1	-	293G
Streptococcus pneumoniae CCRI 1974	570507	PRJNA32279	32279	Terrabacteria group	Firmicutes	2.00068	39.6	-	ABZC01	121	2193	1943	11/14/08	3/9/17	Contig	McGill University	SAMN02470536	GCA_000173595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/595/GCA_000173595.1_ASM17359v1	19351617	CCRI 1974
Helicobacter pylori	210	PRJDB4296	362565	Proteobacteria	delta/epsilon subdivisions	1.57874	38.9	chromosome:AP017333.1	-	1	1541	1510	1/18/17	1/18/17	Chromosome	"Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture"	SAMD00042465	GCA_002357515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/515/GCA_002357515.1_ASM235751v1	-	F20
Neisseria meningitidis	487	PRJNA244818	244818	Proteobacteria	Betaproteobacteria	2.06854	51.8	-	JMCY01	80	2393	2025	7/20/15	3/21/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02729200	GCA_001183215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/215/GCA_001183215.1_Nm34173	244818	34173
Streptococcus pyogenes ABC020054871	1439243	PRJNA233193	233193	Terrabacteria group	Firmicutes	1.78775	38.5	-	JJGI01	3	1797	1684	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567542	GCA_000630305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/305/GCA_000630305.1_Stre_pyog_ABC020054871_V1	-	ABC020054871
Leptospira interrogans serovar Copenhageni str. P2431	1291320	PRJNA188983	188983	Spirochaetes	Spirochaetia	4.60891	35	-	AOWH01	154	4115	3752	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920592	GCA_000343495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/495/GCA_000343495.1_CA_glsol072	-	P2431
Bacillus anthracis	1392	PRJNA257008	257008	Terrabacteria group	Firmicutes	5.45061	35.1	-	LFYJ01	69	6134	5696	8/21/15	3/26/17	Contig	µFORGE	SAMN03757458	GCA_001273065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/065/GCA_001273065.1_BANT009-SEQ-1-ASM-1	-	K4834
Shigella flexneri	623	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.6636	50.9	-	NIYR01	144	5056	4493	9/12/17	9/14/17	Contig	JCVI	SAMN07203026	GCA_002290425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/425/GCA_002290425.1_ASM229042v1	-	ESBL-CM33
Pseudomonas aeruginosa PAO581	1352354	PRJNA209856	209856	Proteobacteria	Gammaproteobacteria	6.04397	66.5	chromosome:NC_022361.1/CP006705.1	-	1	5789	5577	9/16/13	3/15/17	Chromosome	Marshall University School of Medicine	SAMN02603587	GCA_000468555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/555/GCA_000468555.1_ASM46855v1	"1,859,983,924,115,540"	PAO581
Acinetobacter baumannii NIPH 201	1217630	PRJNA183260	183260	Proteobacteria	Gammaproteobacteria	4.13459	38.9	-	APQV01	9	3966	3771	4/16/13	5/18/17	Scaffold	Broad Institute	SAMN01828151	GCA_000369165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/165/GCA_000369165.1_Acin_baum_NIPH_201_V1	-	NIPH 201
Streptococcus agalactiae GB00933	1154955	PRJNA86583	86583	Terrabacteria group	Firmicutes	2.01999	35.2	-	ALUU01	25	2086	1966	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991447	GCA_000288555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/555/GCA_000288555.1_ASM28855v1	-	GB00933
Streptococcus suis YS67	1214215	PRJNA171477	171477	Terrabacteria group	Firmicutes	2.18055	41.1	-	ALND01	47	2175	2025	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469517	GCA_000441455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/455/GCA_000441455.1_version1	-	YS67
Pseudomonas syringae	317	PRJNA263652	263652	Proteobacteria	Gammaproteobacteria	5.82876	59.2	-	JRUO01	39	5196	4923	12/10/14	3/25/17	Contig	BIG	SAMN03104821	GCA_000800685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/685/GCA_000800685.1_ASM80068v1	-	B576
Legionella pneumophila	446	PRJNA281146	281146	Proteobacteria	Gammaproteobacteria	3.24278	38.1	-	LBAB01	39	2963	2843	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03483308	GCA_001582455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/455/GCA_001582455.1_ASM158245v1	26888563	WD_9_1102a
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.85541	50.8	-	NQBS01	94	5044	4735	8/11/17	8/15/17	Contig	JCVI	SAMN07450636	GCA_002247685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/685/GCA_002247685.1_ASM224768v1	-	ECSW+02
Bacteroides fragilis	817	PRJEB8297	276427	FCB group	Bacteroidetes/Chlorobi group	4.5991	44.9	-	CDQP01	1402	4129	3313	2/24/15	4/4/17	Contig	CGS-GL	SAMEA3217991	GCA_001373095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/095/GCA_001373095.1_4g8B_assembly	-	4g8B
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.16321	67.1	-	MUSQ01	210	7768	7231	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001882	GCA_001992205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/205/GCA_001992205.1_ASM199220v1	-	VC14637
Burkholderia pseudomallei str. MARAN	1289589	PRJNA188390	188390	Proteobacteria	Betaproteobacteria	6.63162	67.6	-	APHN01	1019	7204	6230	3/11/13	5/18/17	Scaffold	"Universiti Malaya, Kuala Lumpur"	SAMN02471841	GCA_000346205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/205/GCA_000346205.1_ASM34620v1	-	MARAN
Chlamydia trachomatis F/SWFPminus	1100833	PRJEA74571	74571	PVC group	Chlamydiae	1.04273	41.3	chromosome:NC_022548.1/HE605380.2	-	1	965	901	10/10/13	3/26/17	Chromosome	Wellcome Trust Genome Campus	SAMEA4532335	GCA_000969805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/805/GCA_000969805.1_ASM96980v1	24022847	F/SWFPminus
Bacillus thuringiensis serovar vazensis	180867	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.08587	35	-	NFDQ01	82	6530	6109	5/17/17	5/24/17	Contig	Huazhong Agricultural University	SAMN05934539	GCA_002146905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/905/GCA_002146905.1_ASM214690v1	-	BGSC 4CE1
Vibrio cholerae HC-59B1	991978	PRJNA63963	63963	Proteobacteria	Gammaproteobacteria	3.9345	47.8	-	AJSN01	107	3740	3527	10/15/12	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00752545	GCA_000305545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/545/GCA_000305545.2_ASM30554v2	-	HC-59B1
Clostridioides difficile CD144	1151289	PRJNA85751	85751	Terrabacteria group	Firmicutes	4.0953	28.5	-	AVHT01	56	3824	3629	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766588	GCA_000449365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/365/GCA_000449365.2_ASM44936v2	-	CD144
Francisella tularensis subsp. holarctica	119857	PRJNA286987	286987	Proteobacteria	Gammaproteobacteria	1.78671	32.2	-	MQVF01	102	1835	1557	3/15/17	7/3/17	Contig	Spiez Laboratory	SAMN03774935	GCA_002027765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/765/GCA_002027765.1_ASM202776v1	28348839	FT8C-4F
Brucella abortus bv. 2 str. BCB034	1210450	PRJNA170708	170708	Proteobacteria	Alphaproteobacteria	3.25798	57.3	-	ALOP02	149	3336	3111	8/20/12	3/23/17	Contig	Beijing Institute of Disease Control and Prevention	SAMN02469347	GCA_000292025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/025/GCA_000292025.2_ASM29202v2	23209208	BCB034
Xanthomonas citri subsp. citri	611301	PRJNA255042	255042	Proteobacteria	Gammaproteobacteria	5.31182	64.6	-	JPLO01	32	4853	4460	3/11/15	4/3/17	Contig	"Citrus Research and Education center, Univerisity of Florida"	SAMN02911853	GCA_000950875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/875/GCA_000950875.1_AS8_assembly	25689023	AS8
Xanthomonas oryzae pv. oryzae	64187	PRJNA269441	269441	Proteobacteria	Gammaproteobacteria	4.26229	63.9	-	JXFL01	405	4254	3413	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252534	GCA_001928565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/565/GCA_001928565.1_ASM192856v1	-	DXO-369
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.97806	37.9	-	MLLK01	532	2029	1750	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297024	GCA_001868185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/185/GCA_001868185.1_ASM186818v1	27118061	AWRIB141
Vibrio parahaemolyticus 10290	1238231	PRJNA176660	176660	Proteobacteria	Gammaproteobacteria	5.18304	45.4	-	AVOH01	13	4982	4663	8/22/13	4/10/17	Contig	IGS	SAMN02190057	GCA_000454205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/205/GCA_000454205.1_ASM45420v1	-	10290
Bacillus subtilis	1423	PRJNA274664	274664	Terrabacteria group	Firmicutes	4.17576	43.4	-	JYFL01	36	4397	4238	2/24/15	3/25/17	Contig	Scientific Institut of Public Health	SAMN03329209	GCA_000934165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/165/GCA_000934165.1_ASM93416v1	25858836	2014-3557
Staphylococcus aureus	1280	PRJNA368923	368923	Terrabacteria group	Firmicutes	2.78475	32.9	chromosome:NZ_CP019592.1/CP019592.1	-	1	2854	2666	4/13/17	4/17/17	Complete Genome	University of Calgary	SAMN06274061	GCA_002089055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/055/GCA_002089055.1_ASM208905v1	-	GD5
Clostridium botulinum	1491	PRJNA257008	257008	Terrabacteria group	Firmicutes	3.97854	28.0916	plasmid pCLI:NZ_CM003246.1/CM003246.1	LBFH01	27	3818	3644	5/1/15	3/26/17	Contig	µFORGE	SAMN03418622	GCA_000986925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/986/925/GCA_000986925.1_CBOT001-SEQ-1-ASM-1	-	Walls 8G
Enterococcus faecalis EnGen0074	1151194	PRJNA85639	85639	Terrabacteria group	Firmicutes	3.02481	37.5	-	AIIS01	14	3054	2900	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00792325	GCA_000390665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/665/GCA_000390665.1_Ente_faec_182970_V1	-	182970
Streptococcus mutans N29	857138	PRJNA49787	49787	Terrabacteria group	Firmicutes	1.96551	36.8	-	AHRY01	110	1926	1816	2/11/13	3/23/17	Contig	Cornell University	SAMN02429072	GCA_000339335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/335/GCA_000339335.1_ASM33933v1	23228887	N29
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.14355	52.4	-	CQKN01	71	2506	2191	3/22/15	4/10/17	Contig	SC	SAMEA1677451	GCA_001099685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/685/GCA_001099685.1_8727_5_77	-	GCGS227
Enterococcus faecium EnGen0014	1138885	PRJNA82421	82421	Terrabacteria group	Firmicutes	2.43287	38.4	-	AHWM01	8	2443	2230	12/17/12	4/10/17	Scaffold	Broad Institute	SAMN00779855	GCA_000321565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/565/GCA_000321565.1_Ente_faec_E0679_V1	-	E0679
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.82716	66.6	-	JVUT01	220	4509	4364	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197275	GCA_001069565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/565/GCA_001069565.1_ASM106956v1	26230489	1302_SMAL
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12688	41.2	-	CWDI01	73	2062	1877	6/24/15	3/26/17	Contig	SC	SAMEA1032862	GCA_001176805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/805/GCA_001176805.1_6903_6_6	-	EQUI0151
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.28648	40.2	-	LQGP01	41	2167	2070	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366589	GCA_001931185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/185/GCA_001931185.1_ASM193118v1	-	657BPM
Lactobacillus rhamnosus	47715	PRJNA286713	286713	Terrabacteria group	Firmicutes	3.07872	46.6	-	LPNV01	51	3143	2888	4/21/17	4/24/17	Contig	University of Helsinki	SAMN03769466	GCA_002103185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/185/GCA_002103185.1_ASM210318v1	-	Lrh47
Brucella melitensis B115	1247411	PRJNA178706	178706	Proteobacteria	Alphaproteobacteria	3.29176	57.2	-	AQIC01	5	3371	3142	4/16/13	4/1/17	Contig	Broad Institute	SAMN01798236	GCA_000365865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/865/GCA_000365865.1_Bruc_meli_B115_V1	-	B115
Staphylococcus aureus	1280	PRJNA368953	368953	Terrabacteria group	Firmicutes	2.83214	32.9	chromosome:NZ_CP019593.1/CP019593.1	-	1	2940	2738	4/13/17	4/17/17	Complete Genome	University of Calgary	SAMN06274062	GCA_002089075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/075/GCA_002089075.1_ASM208907v1	-	GD705
Corynebacterium diphtheriae bv. belfanti	2014537	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.39865	53.6	-	LSVX01	49	2326	2114	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496967	GCA_002202505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/505/GCA_002202505.1_S41	-	1137
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.79489	47.4	-	CQCE01	32	4532	4320	3/23/15	3/26/17	Scaffold	SC	SAMEA980204	GCA_001125285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/285/GCA_001125285.1_5116_3_4	-	H1527/93
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.12624	59.9	-	JVZF01	135	4792	4649	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197159	GCA_001061195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/195/GCA_001061195.1_ASM106119v1	26230489	1198.rep2_SMAR
Lactobacillus plantarum	1590	PRJNA314103	314103	Terrabacteria group	Firmicutes	3.23208	44.5	-	LUXD01	31	3128	2962	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04528875	GCA_001633595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/595/GCA_001633595.1_ASM163359v1	-	Nizo2831
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.68589	31.3	-	CUMN01	11	1753	1662	3/31/15	3/18/17	Contig	SC	SAMEA1010489	GCA_001227865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/865/GCA_001227865.1_7065_7_39	-	OXC6385
Burkholderia sp. HI2761	2015360	PRJNA391085	391085	Proteobacteria	Betaproteobacteria	7.47367	66.9	-	NKFN01	34	6989	6602	7/20/17	7/22/17	Contig	University of Michigan	SAMN07257395	GCA_002223355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/355/GCA_002223355.1_ASM222335v1	-	HI2761
Cutibacterium acnes	1747	PRJNA323688	323688	Terrabacteria group	Actinobacteria	2.45679	60	-	LZCK01	189	2528	2324	6/10/16	4/5/17	Contig	Aarhus University	SAMN05185374	GCA_001660885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/885/GCA_001660885.1_ASM166088v1	-	49.1.L1
Staphylococcus haemolyticus	1283	PRJNA361219	361219	Terrabacteria group	Firmicutes	2.3341	32.6	-	MTIZ01	55	2312	2139	1/31/17	3/29/17	Contig	Federation University Australia	SAMN06227236	GCA_001975855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/855/GCA_001975855.1_ASM197585v1	-	SW007
Enterobacter cloacae subsp. cloacae	336306	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.26546	54.1	-	LPPM01	111	5196	4910	12/21/15	3/27/17	Contig	JCVI	SAMN04252922	GCA_001472555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/555/GCA_001472555.1_SMART_628.v1	-	SMART_628
Klebsiella oxytoca	571	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	5.67435	56.2	-	DGCZ01	38	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454024	GCA_002385195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/195/GCA_002385195.1_ASM238519v1	28894102	-
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.53846	56.8	-	NEYE01	101	4397	4196	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN04329644	GCA_002198865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/865/GCA_002198865.1_ASM219886v1	-	MOD1-comp57b
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15787	64.1	-	CSYY01	19	5265	5083	3/24/15	3/18/17	Contig	SC	SAMEA1317706	GCA_001214805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/805/GCA_001214805.1_7520_7_25	-	PAP145
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.29801	66.8	-	LPBJ01	136	7719	7276	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449372	GCA_001528075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/075/GCA_001528075.1_ASM152807v1	-	MSMB1808WGS
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.90661	38.9	-	NGBT01	49	3758	3581	5/15/17	5/23/17	Contig	JCVI	SAMN06837746	GCA_002136575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/575/GCA_002136575.1_ASM213657v1	-	PR301
Enterobacter hormaechei	158836	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.51409	55.4	-	JZYQ01	58	4346	4165	3/19/15	3/25/17	Contig	JCVI	SAMN03283643	GCA_000958405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/405/GCA_000958405.1_ASM95840v1	-	36796
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.20232	54.9	-	LVUR01	67	5156	4893	4/25/16	4/6/17	Contig	JCVI	SAMN04572693	GCA_001631655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/655/GCA_001631655.1_ASM163165v1	-	GN05857
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.88429	64.2	-	FSLM01	18	4805	4651	12/14/16	3/21/17	Scaffold	SC	SAMEA2275759	GCA_900137855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/855/GCA_900137855.1_12163_2_6	-	1033
Pseudomonas sp. HMSC058B07	1715138	PRJNA296266	296266	Proteobacteria	Gammaproteobacteria	6.44179	66.4	-	LTQY01	119	6117	5903	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498634	GCA_001836415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/415/GCA_001836415.1_ASM183641v1	-	HMSC058B07
Streptomyces sp. NBRC 110027	1546107	PRJDB3150	271760	Terrabacteria group	Actinobacteria	8.31955	71.1	-	BBNO01	20	7276	6933	1/6/15	3/11/17	Scaffold	National Institute of Technology and Evaluation	SAMD00020222	GCA_000829715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/715/GCA_000829715.2_ASM82971v2	26380643	NBRC 110027
Bacillus sp. JCA	1414718	PRJEB4940	233683	Terrabacteria group	Firmicutes	4.90831	39.5	-	CCYL01	58	4839	4564	10/18/14	4/10/17	Contig	URMITE	SAMEA2821770	GCA_000820865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/865/GCA_000820865.1_Bacillus_saudimassiliensis_JCA	-	JCA
Acinetobacter sp. 1245593	1310728	PRJNA194804	194804	Proteobacteria	Gammaproteobacteria	4.10088	38.7	-	JFDW01	75	4059	3819	3/3/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02404488	GCA_000584615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/615/GCA_000584615.1_ASM58461v1	-	1245593
Sphingomonas sp. Ant20	104605	PRJNA263723	263723	Proteobacteria	Alphaproteobacteria	4.48768	65.6	-	JRVI01	299	4434	3248	11/14/14	4/17/17	Scaffold	University of Pretoria	SAMN03105962	GCA_000783375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/375/GCA_000783375.1_ASM78337v1	25573925	Ant20
Clostridium sp. CAG:349	1262797	PRJEB843	206926	Terrabacteria group	Firmicutes	1.47299	47.4	-	CBGK01	53	1390	1347	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138536	GCA_000432975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/975/GCA_000432975.1_MGS349	-	-
Rhodococcus sp. WWJCD1	2022519	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.8583	64.2	-	NOXY01	41	5505	5352	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376389	GCA_002258735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/735/GCA_002258735.1_ASM225873v1	-	WWJCD1
Enterobacter sp. 50588862	1736698	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	4.79695	56.1	-	LNHM01	51	4646	4446	12/9/15	4/11/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158295	GCA_001462935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/935/GCA_001462935.1_ASM146293v1	-	50588862
Staphylococcus sp. HMSC035F02	1715129	PRJNA296257	296257	Terrabacteria group	Firmicutes	2.20215	31.4	-	LTRO01	46	2169	2095	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498688	GCA_001836125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/125/GCA_001836125.1_ASM183612v1	-	HMSC035F02
Corynebacterium sp. HMSC036E10	1715215	PRJNA296344	296344	Terrabacteria group	Actinobacteria	2.46815	61.4	-	LTRH01	77	2362	2226	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498667	GCA_001836265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/265/GCA_001836265.1_ASM183626v1	-	HMSC036E10
Streptococcus sp. HMSC034F03	1739287	PRJNA299937	299937	Terrabacteria group	Firmicutes	2.08588	38.7	-	LTYL01	86	2069	1879	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498675	GCA_001838535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/535/GCA_001838535.1_ASM183853v1	-	HMSC034F03
Mycobacterium sp. E188	1834130	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.68111	68.4	-	LZIY01	277	5466	5091	6/17/16	4/13/17	Contig	JCVI	SAMN04634241	GCA_001666935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/935/GCA_001666935.1_ASM166693v1	-	E188
Prevotella sp. UBA1102	1947082	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.91964	56.9	-	DCBR01	127	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06451570	GCA_002313495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/313/495/GCA_002313495.1_ASM231349v1	28894102	-
Paenibacillus sp. RU4T	1907394	PRJEB18887	360774	Terrabacteria group	Firmicutes	5.44625	59.3	-	FTND01	17	4864	4707	1/14/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05880570	GCA_900156355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/355/GCA_900156355.1_IMG-taxon_2710264754_annotated_assembly	-	RU4
Prochlorococcus sp. scB245a_519E23	1471513	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.21809	31.5	-	JFNL01	409	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671384	GCA_000635175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/175/GCA_000635175.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. P155	1895625	PRJNA341043	341043	Proteobacteria	delta/epsilon subdivisions	1.70542	33.5	-	MJLD01	30	1753	1665	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687063	GCA_002139745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/745/GCA_002139745.1_ASM213974v1	28854596	P155
Rhizobium sp. Root274	1736507	PRJNA297942	297942	Proteobacteria	Alphaproteobacteria	4.5682	61.2	-	LMJE01	14	4431	4300	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155776	GCA_001429245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/429/245/GCA_001429245.1_Root274	26633631	Root274
Mesorhizobium sp. URHC0008	1380350	PRJNA213787	213787	Proteobacteria	Alphaproteobacteria	7.1063	62.9	-	JIAP01	35	6863	6611	4/8/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02743919	GCA_000688075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/075/GCA_000688075.1_ASM68807v1	-	URHC0008
Microbacterium sp. UBA1667	1946944	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.69195	65.6	-	DCKT01	300	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451690	GCA_002320735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/735/GCA_002320735.1_ASM232073v1	28894102	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.55925	57.5	-	FXSI01	76	5611	5252	4/28/17	5/6/17	Scaffold	SC	SAMEA2609557	GCA_900182135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/182/135/GCA_900182135.1_14936_2_64	-	3189STDY5864917
Staphylococcus argenteus	985002	PRJEB20633	390605	Terrabacteria group	Firmicutes	2.79599	32.3	-	FXVW01	141	2771	2609	6/15/17	7/5/17	Scaffold	Geogentics	SAMEA104034158	GCA_900183765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/765/GCA_900183765.1_O-3	-	-
Staphylococcus argenteus	985002	PRJEB20633	390605	Terrabacteria group	Firmicutes	2.83449	32.3	-	FXVP01	361	2802	2549	6/15/17	7/5/17	Scaffold	Geogentics	SAMEA104034165	GCA_900183775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/775/GCA_900183775.1_H1604	-	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.80084	57	-	FXSM01	106	5867	5503	4/28/17	5/6/17	Scaffold	SC	SAMEA2609565	GCA_900182145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/182/145/GCA_900182145.1_14936_2_69	-	3189STDY5864922
Microbacterium sp. UBA1663	1946943	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.86258	65.6	-	DCKX01	308	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451694	GCA_002320745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/745/GCA_002320745.1_ASM232074v1	28894102	-
Mesorhizobium sp. SOD10	1505946	PRJEB6724	261147	Proteobacteria	Alphaproteobacteria	6.50928	63.4	-	CCNA01	61	6252	5954	9/15/14	4/10/17	Scaffold	IRD	SAMEA2677838	GCA_000824805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/805/GCA_000824805.1_STM8789_genome_assembly	-	-
Rhizobium sp. BR10423	1755240	PRJNA301785	301785	Proteobacteria	Alphaproteobacteria	8.09986	59.5	-	LNCD01	152	7937	7293	1/28/16	4/11/17	Scaffold	Embrapa Agrobiologia	SAMN04259806	GCA_001542405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/405/GCA_001542405.1_ASM154240v1	-	BR10423
Campylobacter sp. P0024	1895630	PRJNA341048	341048	Proteobacteria	delta/epsilon subdivisions	1.63542	34.2	-	MJLI01	31	1687	1607	5/15/17	9/19/17	Scaffold	University of Aberdeen	SAMN05687068	GCA_002139775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/775/GCA_002139775.1_ASM213977v1	28854596	P0024
Prochlorococcus sp. scB245a_519L21	1471515	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.43171	31.2	-	JFNN01	309	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671386	GCA_000635195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/195/GCA_000635195.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Paenibacillus sp. RU5A	1938794	PRJEB19756	377509	Terrabacteria group	Firmicutes	7.2948	45.7	-	FVZJ01	32	6568	6368	3/11/17	3/18/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06272722	GCA_900168305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/305/GCA_900168305.1_IMG-taxon_2713897451_annotated_assembly	-	RU5A
Prevotella sp. UBA1104	1947083	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.30234	44.6	-	DCBP01	133	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06451568	GCA_002314055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/314/055/GCA_002314055.1_ASM231405v1	28894102	-
Mycobacterium sp. E735	1834148	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.66169	68.4	-	LZIX01	338	5496	5025	6/17/16	4/13/17	Contig	JCVI	SAMN04634242	GCA_001666955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/955/GCA_001666955.1_ASM166695v1	-	E735
Streptococcus sp. HMSC034B03	1715113	PRJNA296241	296241	Terrabacteria group	Firmicutes	1.917	38.9	-	LTNG01	23	1910	1800	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498855	GCA_001838575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/575/GCA_001838575.1_ASM183857v1	-	HMSC034B03
Corynebacterium sp. HMSC070H05	1715096	PRJNA296224	296224	Terrabacteria group	Actinobacteria	2.4113	61.6	-	LTOW01	79	2293	2171	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498609	GCA_001837615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/615/GCA_001837615.1_ASM183761v1	-	HMSC070H05
Staphylococcus sp. HMSC036A09	1715155	PRJNA296283	296283	Terrabacteria group	Firmicutes	2.43185	32	-	LTRM01	68	2391	2287	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498692	GCA_001836145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/145/GCA_001836145.1_ASM183614v1	-	HMSC036A09
Enterobacter sp. K66-74	1736702	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.02595	55.6	-	LNHC01	110	4976	4700	12/9/15	4/11/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158285	GCA_001463035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/035/GCA_001463035.1_ASM146303v1	-	K66-74
Rhodococcus sp. 06-418-1B	2022515	PRJNA395383	395383	Terrabacteria group	Actinobacteria	6.13152	64.6	-	NOYF01	55	5734	5577	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376385	GCA_002258765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/765/GCA_002258765.1_ASM225876v1	-	06-418-1B
Clostridium sp. CAG:1013	1262769	PRJEB676	203285	Terrabacteria group	Firmicutes	2.70463	54.2	-	CAWF01	118	2478	2437	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138537	GCA_000432995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/995/GCA_000432995.1_MGS1013	-	CAG:1013
Sphingomonas sp. TDK1	453247	PRJNA321223	321223	Proteobacteria	Alphaproteobacteria	5.41487	66.2	-	LXVY01	48	5005	4830	5/24/16	4/17/17	Scaffold	Nagaoka University of Technology	SAMN04978195	GCA_001650735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/735/GCA_001650735.1_ASM165073v1	-	TDK1
Acinetobacter sp. 216872	1310734	PRJNA194810	194810	Proteobacteria	Gammaproteobacteria	4.17151	38.8	-	JFEM01	121	4126	3763	3/3/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02404528	GCA_000584795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/795/GCA_000584795.1_ASM58479v1	-	216872
Bacillus sp. B-jedd	1476857	PRJEB5955	242469	Terrabacteria group	Firmicutes	4.70258	44.8	-	CCXR01	4	4639	4493	10/9/14	4/10/17	Contig	URMITE	SAMEA2784367	GCA_000821085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/085/GCA_000821085.1_PRJEB5955_assembly_1	-	B-jedd
Streptomyces sp. FxanaA7	1265492	PRJNA182450	182450	Terrabacteria group	Actinobacteria	10.4436	71.4	-	LACL01	115	9100	8539	3/17/15	3/11/17	Scaffold	DOE Joint Genome Institute	SAMN02745829	GCA_000958545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/545/GCA_000958545.1_ASM95854v1	-	FxanaA7
Pseudomonas sp. HMSC059F05	1715166	PRJNA296294	296294	Proteobacteria	Gammaproteobacteria	6.26931	66.6	-	LTQU01	93	5968	5789	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498646	GCA_001836505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/505/GCA_001836505.1_ASM183650v1	-	HMSC059F05
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.89401	64.2	-	FVPS01	21	4824	4662	3/10/17	3/18/17	Scaffold	SC	SAMEA2275854	GCA_900137885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/885/GCA_900137885.1_12163_2_86	-	1128
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.14405	55.1	-	LVVG01	81	5081	4783	4/25/16	4/6/17	Contig	JCVI	SAMN04572707	GCA_001631725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/725/GCA_001631725.1_ASM163172v1	-	GN06347
Enterobacter hormaechei subsp. oharae	301102	PRJNA271006	271006	Proteobacteria	Gammaproteobacteria	5.02376	55.1	-	JZKM01	179	5039	4793	3/30/15	3/25/17	Contig	JCVI	SAMN03277189	GCA_000965805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/805/GCA_000965805.1_ASM96580v1	-	CIDEIMsCOL2
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.96486	38.7	-	NGCD01	69	3831	3649	5/15/17	5/23/17	Contig	JCVI	SAMN06837770	GCA_002136755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/755/GCA_002136755.1_ASM213675v1	-	PR313
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.83631	66.9	-	LPBK01	95	7273	6854	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449373	GCA_001528095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/095/GCA_001528095.1_ASM152809v1	-	MSMB1810WGS
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18422	64.2	-	CSZO01	44	5206	4961	3/24/15	3/18/17	Contig	SC	SAMEA1317700	GCA_001214925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/925/GCA_001214925.1_7520_7_41	-	PAP161
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.64976	56.4	-	NEYF01	173	4562	4316	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN04329645	GCA_002198885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/885/GCA_002198885.1_ASM219888v1	-	MOD1-comp59a
Enterobacter cloacae subsp. cloacae	336306	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.89635	54.9	-	LPOY01	100	4845	4538	12/21/15	3/27/17	Contig	JCVI	SAMN04252936	GCA_001472845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/845/GCA_001472845.1_SMART_855.v1	-	SMART_855
Staphylococcus haemolyticus	1283	PRJNA317609	317609	Terrabacteria group	Firmicutes	2.5174	32.8	-	NDWY01	4	2430	2259	4/28/17	5/3/17	Contig	Institut Pasteur Korea	SAMN06759398	GCA_002114275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/275/GCA_002114275.1_ASM211427v1	-	IPK_TSA25
Cutibacterium acnes	1747	PRJNA323688	323688	Terrabacteria group	Actinobacteria	2.46122	60	-	LZCM01	175	2532	2326	6/10/16	4/5/17	Contig	Aarhus University	SAMN05185383	GCA_001660935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/935/GCA_001660935.1_ASM166093v1	-	32.1.L2
Burkholderia sp. AU6039	2015344	PRJNA391085	391085	Proteobacteria	Betaproteobacteria	8.49026	66.7	-	NKFK01	52	7791	7454	7/20/17	7/22/17	Contig	University of Michigan	SAMN07257379	GCA_002223365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/365/GCA_002223365.1_ASM222336v1	-	AU6039
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64335	31.4	-	CUMC01	14	1693	1607	3/31/15	3/18/17	Contig	SC	SAMEA1010324	GCA_001228705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/705/GCA_001228705.1_7065_7_30	-	OXC6376
Lactobacillus plantarum	1590	PRJNA314099	314099	Terrabacteria group	Firmicutes	3.18881	44.6	-	LUXA01	39	3114	2932	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04528828	GCA_001633605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/605/GCA_001633605.1_ASM163360v1	-	Nizo2806
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.13737	59.9	-	JVYH01	156	4838	4659	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197183	GCA_001061225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/225/GCA_001061225.1_ASM106122v1	26230489	1219_SMAR
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.386	47	-	CQCZ01	114	4114	3855	3/23/15	3/26/17	Scaffold	SC	SAMEA980175	GCA_001125325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/325/GCA_001125325.1_5103_7_5	-	ERL032770
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.43604	53.5	-	LSVW01	50	2336	2164	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496966	GCA_002202515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/515/GCA_002202515.1_S40	-	1072
Staphylococcus aureus	1280	PRJNA368959	368959	Terrabacteria group	Firmicutes	2.81324	32.9	chromosome:NZ_CP019595.1/CP019595.1	-	1	2884	2689	4/13/17	4/17/17	Complete Genome	University of Calgary	SAMN06274241	GCA_002089095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/095/GCA_002089095.1_ASM208909v1	-	GD1677
Brucella melitensis UK22/06	1160221	PRJNA173589	173589	Proteobacteria	Alphaproteobacteria	3.23243	57.3	-	AQNO01	12	3307	3081	4/16/13	4/1/17	Contig	Broad Institute	SAMN00811219	GCA_000366585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/585/GCA_000366585.1_Bruc_meli_UK22_06_V1	-	UK22/06
Lactobacillus rhamnosus	47715	PRJNA381408	381408	Terrabacteria group	Firmicutes	2.8985	46.8	-	NBVL01	166	3023	2725	8/1/17	8/3/17	Contig	CERELA-CONICET	SAMN06676198	GCA_002238035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/035/GCA_002238035.1_ASM223803v1	-	IBL027
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.28986	40.3	-	LQGR01	28	2152	2056	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366591	GCA_001931225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/225/GCA_001931225.1_ASM193122v1	-	8522APM
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12765	41.2	-	CVYB01	80	2063	1889	6/24/15	3/26/17	Contig	SC	SAMEA1032863	GCA_001176825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/825/GCA_001176825.1_6817_2_91	-	EQUI0044
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.82116	66.6	-	JVUR01	257	4513	4357	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197277	GCA_001069595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/595/GCA_001069595.1_ASM106959v1	26230489	1304_SMAL
Enterococcus faecium EnGen0019	1138886	PRJNA82423	82423	Terrabacteria group	Firmicutes	2.70274	38.2	-	AHWN01	18	2748	2495	12/17/12	4/10/17	Scaffold	Broad Institute	SAMN00779866	GCA_000321585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/585/GCA_000321585.1_Ente_faec_E0680_V1	-	E0680
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14719	52.4	-	CQNC01	79	2515	2200	3/23/15	4/11/17	Contig	SC	SAMEA1690335	GCA_001099825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/825/GCA_001099825.1_8289_2_75	-	GCGS075
Streptococcus mutans NMT4863	857137	PRJNA49789	49789	Terrabacteria group	Firmicutes	1.9266	36.8	-	AHRZ01	97	1894	1805	2/11/13	3/23/17	Contig	Cornell University	SAMN02429073	GCA_000339355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/355/GCA_000339355.1_ASM33935v1	23228887	NMT4863
Enterococcus faecalis EnGen0075	1151195	PRJNA85641	85641	Terrabacteria group	Firmicutes	2.95449	37.4	-	AIIT01	5	3017	2883	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00792300	GCA_000390685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/685/GCA_000390685.1_Ente_faec_19116_V1	-	19116
Clostridium botulinum	1491	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.55105	29.8	-	JUWA01	191	3336	3273	7/10/15	3/26/17	Contig	University of Washington	SAMN03197918	GCA_001058115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/115/GCA_001058115.1_ASM105811v1	26230489	713_CBOT
Staphylococcus aureus	1280	PRJNA378150	378150	Terrabacteria group	Firmicutes	2.8027	32.9	chromosome:NZ_CP020019.1/CP020019.1	-	1	2879	2707	3/13/17	3/15/17	Complete Genome	FU Berlin	SAMN06480668	GCA_002025125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/125/GCA_002025125.1_ASM202512v1	-	08S00974
Bacillus subtilis	1423	PRJNA277415	277415	Terrabacteria group	Firmicutes	4.09923	43.7	-	LDUW01	36	4286	4114	6/30/15	3/26/17	Contig	University of Malaya	SAMN03751781	GCA_001043765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/765/GCA_001043765.1_ASM104376v1	-	LK22
Vibrio parahaemolyticus VP250	1238208	PRJNA176643	176643	Proteobacteria	Gammaproteobacteria	5.20266	45.4	-	AVOK01	5	4999	4748	8/22/13	3/24/17	Contig	IGS	SAMN02189721	GCA_000454225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/225/GCA_000454225.1_ASM45422v1	-	VP250
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.93518	38	-	MLLL01	510	2084	1725	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297025	GCA_001868195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/195/GCA_001868195.1_ASM186819v1	27118061	AWRIB147
Xanthomonas oryzae pv. oryzae	64187	PRJNA269443	269443	Proteobacteria	Gammaproteobacteria	4.33726	63.8	-	JXFN01	408	4341	3501	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252558	GCA_001928585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/585/GCA_001928585.1_ASM192858v1	-	IXO35
Xanthomonas citri	346	PRJNA254467	254467	Proteobacteria	Gammaproteobacteria	5.12714	64.5	-	JPYH02	204	4565	4141	10/21/15	4/5/17	Contig	Institute for Agricultural and Fisheries Research (ILVO)	SAMN02903999	GCA_001401545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/545/GCA_001401545.2_ASM140154v2	-	LMG 7399
Brucella abortus 104M	1210454	PRJNA170712	170712	Proteobacteria	Alphaproteobacteria	3.28727	57.3	-	ALOQ01	97	3322	3135	8/20/12	3/23/17	Contig	Beijing Institute of Disease Control and Prevention	SAMN02469340	GCA_000292045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/045/GCA_000292045.1_ASM29204v1	23045513	104M
Francisella tularensis subsp. holarctica	119857	PRJNA286987	286987	Proteobacteria	Gammaproteobacteria	1.78966	32.2	-	MQVE01	99	1856	1552	3/15/17	7/3/17	Contig	Spiez Laboratory	SAMN03774942	GCA_002027785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/785/GCA_002027785.1_ASM202778v1	28348839	FT16C-B1
Clostridioides difficile CD149	1151290	PRJNA85753	85753	Terrabacteria group	Firmicutes	4.33378	28.2	-	AVHU01	81	4069	3872	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766589	GCA_000449385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/385/GCA_000449385.2_ASM44938v2	-	CD149
Vibrio cholerae HC-44C1	992002	PRJNA64011	64011	Proteobacteria	Gammaproteobacteria	3.87654	47.7	-	AJSK01	90	3679	3481	10/15/12	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00752542	GCA_000305565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/565/GCA_000305565.2_ASM30556v2	-	HC-44C1
Bacillus thuringiensis serovar canadensis	180855	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.37101	35.2	-	NFDS01	30	5726	5415	5/17/17	5/24/17	Contig	Huazhong Agricultural University	SAMN05934543	GCA_002146925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/925/GCA_002146925.1_ASM214692v1	-	BGSC 4H2
Chlamydia trachomatis	813	PRJNA328474	328474	PVC group	Chlamydiae	1.05192	41.2636	chromosome:NZ_CP016420.1/CP016420.1; plasmid unnamed1:NZ_CP016421.1/CP016421.1	-	2	980	902	9/16/16	3/28/17	Chromosome	London School of Hygiene & Tropical Medicine	SAMN05372049	GCA_001729845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/845/GCA_001729845.1_ASM172984v1	-	SB006930
Burkholderia pseudomallei	28450	PRJNA244245	244245	Proteobacteria	Betaproteobacteria	7.36865	67.9	-	JNOW01	5	7622	6985	9/23/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02839582	GCA_000756905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/905/GCA_000756905.1_BDD	25414490	BDD
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.87175	67	-	MUST01	166	7530	7107	2/10/17	4/2/17	Contig	University of British Columbia	SAMN05001885	GCA_001992225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/225/GCA_001992225.1_ASM199222v1	-	VC6666
Bacteroides fragilis	817	PRJNA330835	330835	FCB group	Bacteroidetes/Chlorobi group	5.24707	43.3959	plasmid unnamed1:NZ_CM004507.1/CM004507.1	MBRB01	81	4620	4360	7/22/16	4/5/17	Contig	Federal Research and Clinical Center of Physical-Chemical Medicine of FMBA of Russia	SAMN05426807	GCA_001692695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/695/GCA_001692695.1_ASM169269v1	-	JIM10
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.80173	50.7	-	NQBV01	152	5065	4614	8/11/17	8/15/17	Contig	JCVI	SAMN07450633	GCA_002247725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/725/GCA_002247725.1_ASM224772v1	-	ECSW+06
Legionella pneumophila	446	PRJNA281150	281150	Proteobacteria	Gammaproteobacteria	3.43185	38.2	-	LBAC01	79	3131	2982	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03483312	GCA_001582465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/465/GCA_001582465.1_ASM158246v1	26888563	SH095
Pseudomonas syringae pv. syringae	321	PRJNA274669	274669	Proteobacteria	Gammaproteobacteria	5.98385	59.1	-	JYHJ01	24	5344	5094	3/2/15	3/25/17	Contig	INRA	SAMN03328983	GCA_000935775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/775/GCA_000935775.1_PSS41A-G1	25931602	41a
Streptococcus suis YS77	1214219	PRJNA171482	171482	Terrabacteria group	Firmicutes	2.26225	41.4	-	ALNH01	115	2253	2101	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469520	GCA_000441475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/475/GCA_000441475.1_version1	-	YS77
Streptococcus agalactiae GB00947	1154957	PRJNA86587	86587	Terrabacteria group	Firmicutes	2.0998	35.3	-	ALUV01	268	2252	2045	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991364	GCA_000288575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/575/GCA_000288575.1_ASM28857v1	-	GB00947
Acinetobacter baumannii NIPH 527	1217635	PRJNA183259	183259	Proteobacteria	Gammaproteobacteria	4.188	39.2	-	APQW01	18	4077	3903	4/16/13	5/18/17	Scaffold	Broad Institute	SAMN01828150	GCA_000369185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/185/GCA_000369185.1_Acin_baum_NIPH_527_V1	-	NIPH 527
Pseudomonas aeruginosa c7447m	1352355	PRJNA209859	209859	Proteobacteria	Gammaproteobacteria	6.2623	66.5	chromosome:NC_022360.1/CP006728.1	-	1	5928	5710	9/16/13	3/15/17	Chromosome	Marshall University School of Medicine	SAMN02603588	GCA_000468935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/935/GCA_000468935.1_ASM46893v1	24115552	C7447m
Shigella flexneri	623	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.91271	50.8	-	NIYV01	138	5175	4760	9/12/17	9/14/17	Contig	JCVI	SAMN07203020	GCA_002290495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/495/GCA_002290495.1_ASM229049v1	-	ESBL-06065-006
Bacillus anthracis	1392	PRJNA257008	257008	Terrabacteria group	Firmicutes	5.45099	35.1	-	LGIE01	41	6114	5734	8/21/15	3/26/17	Contig	µFORGE	SAMN03757459	GCA_001273085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/085/GCA_001273085.1_BANT010-SEQ-1-ASM-1	-	K3974
Leptospira interrogans serovar Icterohaemorrhagiae str. 201100516	1291352	PRJNA188985	188985	Spirochaetes	Spirochaetia	4.62	35	-	AOWF01	162	4136	3773	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920593	GCA_000343515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/515/GCA_000343515.1_CA_glsol090	-	201100516
Streptococcus pyogenes ABC020052420	1439215	PRJNA233186	233186	Terrabacteria group	Firmicutes	1.86446	38.6	-	JJGJ01	6	1939	1799	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567535	GCA_000630325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/325/GCA_000630325.1_Stre_pyog_ABC020052420_V1	-	ABC020052420
Neisseria meningitidis	487	PRJNA244826	244826	Proteobacteria	Betaproteobacteria	2.1494	51.5	-	JMCZ01	85	2495	2110	7/20/15	3/21/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02729209	GCA_001183245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/245/GCA_001183245.1_Nm100572	25989189	100572
Helicobacter pylori	210	PRJDB4296	362565	Proteobacteria	delta/epsilon subdivisions	1.63431	38.7	chromosome:AP017334.1	-	1	1600	1567	1/18/17	1/18/17	Chromosome	"Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture"	SAMD00042468	GCA_002357535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/535/GCA_002357535.1_ASM235753v1	-	F210
Streptococcus pneumoniae CCRI 1974M2	574965	PRJNA32767	32767	Terrabacteria group	Firmicutes	1.99852	39.6	-	ABZT01	130	2183	1943	11/19/08	3/8/17	Contig	McGill University	SAMN02470537	GCA_000173635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/635/GCA_000173635.1_ASM17363v1	19351617	CCRI 1974M2
Staphylococcus aureus	1280	PRJNA293604	293604	Terrabacteria group	Firmicutes	2.88586	32.9	chromosome:NZ_CP019945.1/CP019945.1	-	1	3041	2850	2/27/17	4/1/17	Complete Genome	Northwest A&F University	SAMN04008874	GCA_001298325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/325/GCA_001298325.2_ASM129832v2	26416872	BA01611
Mycobacterium tuberculosis TRS24	1334070	PRJNA203182	203182	Terrabacteria group	Actinobacteria	4.41153	65.6	chromosome:NZ_CP009191.1/CP009191.1	-	1	4272	4089	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837644	GCA_001998705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/705/GCA_001998705.1_ASM199870v1	27261264	TRS24
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.83594	38	-	FFIO01	16	1843	1715	2/9/16	3/27/17	Scaffold	SC	SAMEA2674767	GCA_900017145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/145/GCA_900017145.1_14412_4_50	-	2842STDY5882078
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.35859	68.9	-	BDNN01	552	5161	4739	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076665	GCA_002089475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/475/GCA_002089475.1_ASM208947v1	28045086	IH-660
Lactococcus lactis	1358	PRJNA375758	375758	Terrabacteria group	Firmicutes	2.73077	35.2	-	NCXG01	368	2773	2563	8/29/17	8/30/17	Contig	SysMilk	SAMN06718475	GCA_002277015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/015/GCA_002277015.1_ASM227701v1	-	Olga-2
Bacillus cereus HuB4-10	1053210	PRJNA70385	70385	Terrabacteria group	Firmicutes	5.64213	35.2	-	AHEE01	13	5971	5582	8/15/12	6/15/17	Scaffold	Broad Institute	SAMN02596842	GCA_000291095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/095/GCA_000291095.1_Baci_cere_HuB4-10_V1	-	HuB4-10
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.49112	32	-	JVYY01	145	2458	2374	7/10/15	3/26/17	Contig	University of Washington	SAMN03197166	GCA_001068785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/785/GCA_001068785.1_ASM106878v1	26230489	1204_SEPI
Staphylococcus aureus	1280	PRJNA353940	353940	Terrabacteria group	Firmicutes	2.80476	32.9	chromosome:NZ_CP019117.1/CP019117.1	-	1	2898	2714	1/18/17	3/6/17	Complete Genome	Eastern Regional Research Center -ARS-USDA	SAMN06200256	GCA_001956755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/755/GCA_001956755.1_ASM195675v1	-	SJTUF_J27
Pseudomonas fluorescens	294	PRJNA296741	296741	Proteobacteria	Gammaproteobacteria	6.59103	60.9	-	LKEI01	101	6062	5877	12/15/15	4/4/17	Scaffold	New Zealand Institute for Plant & Food research	SAMN04102827	GCA_001466915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/915/GCA_001466915.1_ASM146691v1	27056212	ICMP3636
Yersinia pestis biovar Antiqua str. E1979001	360099	PRJNA17683	17683	Proteobacteria	Gammaproteobacteria	4.84781	47.7	-	AAYV01	75	4621	4375	3/26/07	5/19/17	Contig	TIGR	SAMN02404400	GCA_000169695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/695/GCA_000169695.1_ASM16969v1	19820101	E1979001
Staphylococcus aureus subsp. aureus	46170	PRJNA355085	355085	Terrabacteria group	Firmicutes	2.81977	32.9	chromosome:NZ_CP018205.1/CP018205.1	-	1	2992	2862	12/12/16	3/6/17	Complete Genome	CNRS	SAMN06062108	GCA_001900185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/185/GCA_001900185.1_ASM190018v1	-	HG001
Staphylococcus aureus	1280	PRJNA302097	302097	Terrabacteria group	Firmicutes	2.77185	32.9	chromosome:NZ_CP013182.1/CP013182.1	-	1	2856	2618	11/17/16	3/6/17	Complete Genome	Zhejiang University School of Medicine	SAMN04263915	GCA_001880265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/265/GCA_001880265.1_ASM188026v1	-	SA40TW
Staphylococcus aureus	1280	PRJDB4364	303080	Terrabacteria group	Firmicutes	2.89711	32.9	chromosome:AP017377.1	-	1	-	-	10/19/16	10/19/16	Complete Genome	International Medical Education and Research Center	SAMD00043228	GCA_002355355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/355/GCA_002355355.1_ASM235535v1	-	OC8
Candidatus Melainabacteria bacterium MEL.A1	1899017	PRJNA321218	321218	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.86734	32.9	chromosome:CP017245.1	-	1	1838	1772	10/13/16	10/13/16	Complete Genome	None	SAMN05425469	GCA_001765415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/415/GCA_001765415.1_ASM176541v1	-	-
Staphylococcus aureus	1280	PRJEB15428	344867	Terrabacteria group	Firmicutes	2.77158	32.9	chromosome 1:NZ_LT615218.1/LT615218.1	-	1	2893	2713	9/29/16	3/6/17	Complete Genome	UNIVERSITY OF MELBOURNE	SAMEA4443152	GCA_900096745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/096/745/GCA_900096745.1_AUS0325	-	AUS0325
Staphylococcus aureus	1280	PRJNA295337	295337	Terrabacteria group	Firmicutes	2.90338	32.9	chromosome:NZ_CP012692.1/CP012692.1	-	1	3036	2872	9/14/16	3/6/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN04046233	GCA_001725965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/965/GCA_001725965.1_ASM172596v1	-	FORC_027
Yersinia pestis biovar Orientalis str. F1991016	404214	PRJNA17681	17681	Proteobacteria	Gammaproteobacteria	4.89208	47.7	-	ABAT01	107	4721	4439	5/16/07	5/19/17	Contig	TIGR	SAMN02404399	GCA_000170275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/275/GCA_000170275.1_ASM17027v1	19820101	F1991016
Pseudomonas fluorescens	294	PRJNA262731	262731	Proteobacteria	Gammaproteobacteria	5.86623	60.2	-	LCYD01	12	5445	5229	1/29/16	9/18/17	Scaffold	University of Padova	SAMN03085547	GCA_001542695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/695/GCA_001542695.1_ASM154269v1	-	Ps_20
Staphylococcus aureus	1280	PRJEB14381	325902	Terrabacteria group	Firmicutes	2.8789	32.9	chromosome 1:NZ_LT598688.1/LT598688.1	-	1	3065	2922	7/14/16	3/6/17	Complete Genome	UNIVERSITY OF MELBOURNE	SAMEA4072170	GCA_900092595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/595/GCA_900092595.1_Sa_Newman_UoM	-	-
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.51861	32	-	JVXB01	123	2481	2392	7/10/15	3/26/17	Contig	University of Washington	SAMN03197215	GCA_001068895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/895/GCA_001068895.1_ASM106889v1	26230489	1249_SEPI
Bacillus cereus HuB5-5	1053212	PRJNA70389	70389	Terrabacteria group	Firmicutes	5.80297	35.3	-	AHEG01	11	6087	5709	8/15/12	6/15/17	Scaffold	Broad Institute	SAMN02596844	GCA_000291115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/115/GCA_000291115.1_Baci_cere_HuB5-5_V1	-	HuB5-5
Lactococcus lactis subsp. lactis bv. diacetylactis	44688	PRJNA247972	247972	Terrabacteria group	Firmicutes	2.33892	35.2	-	JNCC03	48	2332	2131	7/2/14	4/6/17	Scaffold	"Bioifnormatik, Biozentrum, Uni Wuerzburg"	SAMN02796569	GCA_000721865.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/865/GCA_000721865.3_ASM72186v3	26586883	GL2
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.08974	69.1	-	BDNO01	272	4863	4614	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076666	GCA_002089495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/495/GCA_002089495.1_ASM208949v1	28045086	IH-687
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.87476	38	-	FFIR01	20	1892	1772	2/9/16	3/27/17	Scaffold	SC	SAMEA2674787	GCA_900017155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/155/GCA_900017155.1_14412_4_59	-	2842STDY5882087
Mycobacterium tuberculosis TRS26	1334072	PRJNA203184	203184	Terrabacteria group	Actinobacteria	4.41153	65.4	chromosome:NZ_CP009193.1/CP009193.1	-	1	4313	4066	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837646	GCA_001998735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/735/GCA_001998735.1_ASM199873v1	27261264	TRS26
Staphylococcus aureus	1280	PRJNA321000	321000	Terrabacteria group	Firmicutes	2.79689	32.9	chromosome:NZ_CP015645.1/CP015645.1	-	1	2913	2747	6/3/16	3/6/17	Complete Genome	Robert Koch Institut	SAMN04939716	GCA_001656045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/045/GCA_001656045.1_ASM165604v1	-	08-02119
Streptococcus pneumoniae str. Canada MDR_19A	637987	PRJNA33805	33805	Terrabacteria group	Firmicutes	2.02913	39.8	-	ACNU01	127	2233	1961	12/10/09	3/9/17	Contig	Ontario Agency for Health Protection and Promotion	SAMN02470769	GCA_000174855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/855/GCA_000174855.1_ASM17485v1	20042094	Canada MDR_19A
Helicobacter pylori	210	PRJDB4296	362565	Proteobacteria	delta/epsilon subdivisions	1.58564	38.9	chromosome:AP017335.1	-	1	1555	1518	1/18/17	1/18/17	Chromosome	"Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture"	SAMD00042469	GCA_002357555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/555/GCA_002357555.1_ASM235755v1	-	F211
Neisseria meningitidis	487	PRJNA244827	244827	Proteobacteria	Betaproteobacteria	2.09925	51.7	-	JMDA01	96	2398	2054	7/20/15	3/21/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02729210	GCA_001183255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/255/GCA_001183255.1_Nm440501	25989189	440501
Streptococcus pyogenes ABC020052216	1439208	PRJNA233183	233183	Terrabacteria group	Firmicutes	1.82077	38.5	-	JJGK01	4	1838	1729	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567532	GCA_000630345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/345/GCA_000630345.1_Stre_pyog_ABC020052216_V1	-	ABC020052216
Leptospira interrogans serovar Copenhageni str. Fiocruz LV256	1291321	PRJNA188984	188984	Spirochaetes	Spirochaetia	4.59327	35	-	AOWG01	161	4114	3752	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920621	GCA_000343535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/535/GCA_000343535.1_CA_glsol086	-	Fiocruz LV256
Bacillus anthracis	1392	PRJNA257008	257008	Terrabacteria group	Firmicutes	5.46076	35.1	-	LGIF01	36	6132	5740	8/21/15	3/26/17	Contig	µFORGE	SAMN03757460	GCA_001273105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/105/GCA_001273105.1_BANT012-SEQ-1-ASM-1	-	K1129
Shigella flexneri	623	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.91049	50.8	-	NIYU01	131	5171	4759	9/12/17	9/14/17	Contig	JCVI	SAMN07203021	GCA_002290505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/505/GCA_002290505.1_ASM229050v1	-	ESBL-T020
Pseudomonas aeruginosa PAO1-VE2	1367493	PRJNA212861	212861	Proteobacteria	Gammaproteobacteria	6.26548	66.6	chromosome:NC_022591.1/CP006831.1	-	1	5911	5777	10/28/13	3/15/17	Chromosome	Marshall University School of Medicine	SAMN02603589	GCA_000484495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/495/GCA_000484495.1_ASM48449v1	24336371	PAO1-VE2
Acinetobacter baumannii NIPH 335	1217633	PRJNA183258	183258	Proteobacteria	Gammaproteobacteria	3.95696	39	-	APQX01	15	3820	3614	4/16/13	3/15/17	Scaffold	Broad Institute	SAMN01828149	GCA_000369205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/205/GCA_000369205.1_Acin_baum_NIPH_335_V1	-	NIPH 335
Streptococcus agalactiae GB00959	1154962	PRJNA86597	86597	Terrabacteria group	Firmicutes	2.06766	35.4	-	ALUX01	217	2115	1943	8/15/12	8/18/15	Contig	The J. Craig Venter Institute	SAMN00991434	GCA_000288615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/615/GCA_000288615.1_ASM28861v1	-	GB00959
Streptococcus suis YS7	1214216	PRJNA171483	171483	Terrabacteria group	Firmicutes	2.35108	41.3	-	ALNI01	102	2311	2131	7/25/13	3/15/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469533	GCA_000441495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/495/GCA_000441495.1_version1	-	YS7
Pseudomonas syringae pv. papulans	83963	PRJNA274670	274670	Proteobacteria	Gammaproteobacteria	6.11238	59	-	JYHI01	182	5734	5301	3/2/15	3/25/17	Contig	INRA	SAMN03328960	GCA_000935795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/795/GCA_000935795.1_PSPCFBP1754-G1	25931602	CFBP 1754
Legionella pneumophila	446	PRJNA281151	281151	Proteobacteria	Gammaproteobacteria	3.30897	38.2	-	LBAD01	27	3029	2928	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03483313	GCA_001582475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/475/GCA_001582475.1_ASM158247v1	26888563	ATCC 33152
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.05119	50.6	-	NQBU01	198	5284	4863	8/11/17	8/15/17	Contig	JCVI	SAMN07450634	GCA_002247735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/735/GCA_002247735.1_ASM224773v1	-	ECSW+05
Bacteroides fragilis	817	PRJNA290835	290835	FCB group	Bacteroidetes/Chlorobi group	5.23882	43.3	-	LGTH01	5	4550	4274	7/26/16	4/5/17	Contig	Seqomics Ltd	SAMN03921828	GCA_001695355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/355/GCA_001695355.1_ASM169535v1	27246231	BF8
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.78796	67	-	MUSW01	157	7458	7031	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001889	GCA_001992255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/255/GCA_001992255.1_ASM199225v1	-	VC8381
Burkholderia pseudomallei	28450	PRJNA244251	244251	Proteobacteria	Betaproteobacteria	7.32751	67.9	-	JPNO01	45	7752	6889	9/23/14	4/10/17	Scaffold	Los Alamos National Laboratory	SAMN02848475	GCA_000756915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/915/GCA_000756915.1_BDZ	25414490	BDZ
Chlamydia trachomatis	813	PRJNA328474	328474	PVC group	Chlamydiae	1.05192	41.3629	chromosome:NZ_CP016422.1/CP016422.1; plasmid unnamed1:NZ_CP016423.1/CP016423.1	-	2	981	812	9/16/16	3/28/17	Chromosome	London School of Hygiene & Tropical Medicine	SAMN05372050	GCA_001729865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/865/GCA_001729865.1_ASM172986v1	-	SB008107
Bacillus thuringiensis serovar subtoxicus	475791	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.40193	35.2	-	NFDT01	276	6757	6249	5/17/17	5/24/17	Contig	Huazhong Agricultural University	SAMN05934544	GCA_002146945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/945/GCA_002146945.1_ASM214694v1	-	BGSC 4I4
Vibrio cholerae HC-37A1	991958	PRJNA63923	63923	Proteobacteria	Gammaproteobacteria	4.02955	47.5	-	AJSJ01	97	3819	3682	10/15/12	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00752441	GCA_000305585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/585/GCA_000305585.2_ASM30558v2	-	HC-37A1
Clostridioides difficile CD159	1151291	PRJNA85755	85755	Terrabacteria group	Firmicutes	3.98649	28.4	-	AVHV01	290	3746	3508	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766590	GCA_000449405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/405/GCA_000449405.2_ASM44940v2	-	CD159
Francisella tularensis	263	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	1.9276	32.3	-	NBTB01	2	1961	1660	4/10/17	4/13/17	Contig	US Food and Drug Administration 	SAMN04875573	GCA_002082235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/235/GCA_002082235.1_ASM208223v1	-	FDAARGOS_247
Brucella abortus bv. 1 str. BCB027	1210446	PRJNA170704	170704	Proteobacteria	Alphaproteobacteria	3.24092	57.3	-	ALOL02	292	3345	3090	8/20/12	3/23/17	Contig	Beijing Institute of Disease Control and Prevention	SAMN02469343	GCA_000292145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/145/GCA_000292145.2_ASM29214v2	23405292	BCB027
Xanthomonas citri subsp. citri	611301	PRJNA254373	254373	Proteobacteria	Gammaproteobacteria	5.10757	64.8	-	JPYD01	1143	4721	4099	10/21/15	4/4/17	Contig	Institute for Agricultural and Fisheries Research (ILVO)	SAMN02903175	GCA_001401655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/655/GCA_001401655.1_Xcc_LMG9322	-	LMG 9322
Xanthomonas oryzae pv. oryzae	64187	PRJNA269446	269446	Proteobacteria	Gammaproteobacteria	4.29677	63.8	-	JXFQ01	477	4303	3461	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252573	GCA_001928605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/605/GCA_001928605.1_ASM192860v1	-	IXO90
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.97937	38.1	-	MLLN01	538	2045	1745	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297027	GCA_001868205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/205/GCA_001868205.1_ASM186820v1	27118061	AWRIB150
Vibrio parahaemolyticus 3259	1238198	PRJNA176632	176632	Proteobacteria	Gammaproteobacteria	5.36087	45.2	-	AVOL01	6	5165	4866	8/22/13	3/24/17	Contig	IGS	SAMN02189719	GCA_000454245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/245/GCA_000454245.1_ASM45424v1	-	3259
Bacillus subtilis subsp. subtilis	135461	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.99812	43.8	-	JVEA01	42	4050	3929	7/10/15	3/26/17	Contig	University of Washington	SAMN03197710	GCA_001057075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/075/GCA_001057075.1_ASM105707v1	26230489	516_BAMY
Staphylococcus aureus	1280	PRJNA321000	321000	Terrabacteria group	Firmicutes	2.74281	32.9	chromosome:NZ_CP015646.1/CP015646.1	-	1	2827	2667	6/3/16	3/6/17	Complete Genome	Robert Koch Institut	SAMN04939717	GCA_001656075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/656/075/GCA_001656075.1_ASM165607v1	-	08-02300
Clostridium botulinum	1491	PRJNA257008	257008	Terrabacteria group	Firmicutes	3.90675	28	-	LGIH01	24	3745	3533	8/21/15	3/26/17	Contig	µFORGE	SAMN03787459	GCA_001273165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/165/GCA_001273165.1_CBOT002-SEQ-1-ASM-1	-	ATCC 17843
Enterococcus faecalis EnGen0058	1151196	PRJNA85643	85643	Terrabacteria group	Firmicutes	3.06318	37.5	-	AIIU01	17	3098	2945	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00792301	GCA_000390705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/705/GCA_000390705.1_Ente_faec_2630V05_V1	-	2630V05
Streptococcus mutans T4	857132	PRJNA49799	49799	Terrabacteria group	Firmicutes	1.96605	36.7	-	AHSE01	113	1942	1852	2/11/13	3/23/17	Contig	Cornell University	SAMN02429026	GCA_000339375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/375/GCA_000339375.1_ASM33937v1	23228887	T4
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14501	52.4	-	CQOI01	79	2504	2183	3/23/15	4/11/17	Contig	SC	SAMEA1690390	GCA_001100285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/285/GCA_001100285.1_8727_8_33	-	GCGS129
Enterococcus faecium EnGen0008	1138887	PRJNA82425	82425	Terrabacteria group	Firmicutes	2.65994	38.3	-	AHWO01	7	2725	2470	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779867	GCA_000321605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/605/GCA_000321605.1_Ente_faec_E0688_V1	-	E0688
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.02484	66.2	-	JVUP01	158	4700	4533	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197279	GCA_001069615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/615/GCA_001069615.1_ASM106961v1	26230489	1305.rep2_SMAL
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.155	41.2	-	CWBM01	87	2110	1922	6/24/15	3/26/17	Contig	SC	SAMEA1032865	GCA_001176845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/845/GCA_001176845.1_6903_4_66	-	EQUI0115
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.29542	40.3	-	LQFB01	29	2155	2058	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366549	GCA_001931235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/235/GCA_001931235.1_ASM193123v1	-	2901PM
Lactobacillus rhamnosus	47715	PRJNA407882	407882	Terrabacteria group	Firmicutes	2.90846	46.8	-	NXEU01	27	3011	2826	10/1/17	10/1/17	Contig	McGill University	SAMN07665580	GCA_002406705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/406/705/GCA_002406705.1_ASM240670v1	-	B1
Brucella melitensis CNGB 1076	1198679	PRJNA176519	176519	Proteobacteria	Alphaproteobacteria	3.29182	57.2	-	AQNE01	6	3371	3144	4/16/13	4/1/17	Contig	Broad Institute	SAMN01047730	GCA_000366625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/625/GCA_000366625.1_Bruc_meli_CNGB_1076_V1	-	CNGB 1076
Staphylococcus aureus	1280	PRJNA298754	298754	Terrabacteria group	Firmicutes	2.67888	32.9	chromosome:NZ_CP012978.1/CP012978.1	-	1	2746	2579	4/5/16	3/6/17	Complete Genome	LNCC	SAMN04166543	GCA_001611345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/345/GCA_001611345.1_ASM161134v1	26918656	ST20130941
Corynebacterium diphtheriae bv. belfanti	2014537	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.39457	53.6	-	LSWA01	45	2309	2112	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496972	GCA_002202575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/575/GCA_002202575.1_S46	-	1734
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.40809	47.1	-	CQAR01	346	4169	3861	3/23/15	3/26/17	Scaffold	SC	SAMEA980159	GCA_001135865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/865/GCA_001135865.1_4976_3_4	-	ERL04757
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.16346	59.6	-	JVZV01	139	4882	4746	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197143	GCA_001062235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/235/GCA_001062235.1_ASM106223v1	26230489	1185_SMAR
Lactobacillus plantarum	1590	PRJNA314107	314107	Terrabacteria group	Firmicutes	3.22305	44.5	-	LUXE01	37	3147	2979	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04528876	GCA_001633645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/645/GCA_001633645.1_ASM163364v1	-	Nizo2855
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69944	31.3	-	CUVQ01	15	1748	1662	3/31/15	3/18/17	Contig	SC	SAMEA1401457	GCA_001229345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/345/GCA_001229345.1_7213_3_85	-	OXC6630
Burkholderia sp. CF145	1882792	PRJNA333783	333783	Proteobacteria	Betaproteobacteria	10.8601	61.9	-	NPKA01	4	9888	9471	8/10/17	8/12/17	Contig	DOE Joint Genome Institute	SAMN05442915	GCA_002245905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/905/GCA_002245905.1_ASM224590v1	-	CF145
Cutibacterium acnes	1747	PRJNA323688	323688	Terrabacteria group	Actinobacteria	2.45968	60	-	LZCN01	185	2529	2318	6/10/16	4/5/17	Contig	Aarhus University	SAMN05185386	GCA_001660945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/945/GCA_001660945.1_ASM166094v1	-	46.1.L1
Staphylococcus haemolyticus	1283	PRJNA385713	385713	Terrabacteria group	Firmicutes	2.50142	32.6	-	NFUG01	4	2402	2283	6/2/17	6/5/17	Contig	University of Applied Sciencesl Leiden	SAMN06908747	GCA_002165435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/435/GCA_002165435.1_ASM216543v1	-	SH06
Enterobacter cloacae subsp. cloacae	336306	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.48597	54.2	-	LPOW01	109	5406	5138	12/21/15	3/27/17	Contig	JCVI	SAMN04252938	GCA_001472895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/895/GCA_001472895.1_SMART_886.v1	-	SMART_886
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.72979	56.8	-	NEXZ01	115	4673	4450	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN04329640	GCA_002198925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/925/GCA_002198925.1_ASM219892v1	-	MOD1-comp45b
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15674	64.1	-	CSZC01	31	5271	4875	3/24/15	4/27/17	Contig	SC	SAMEA1317712	GCA_001214945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/945/GCA_001214945.1_7520_7_29	-	PAP149
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.78032	67	-	LPAT01	125	7131	6707	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449356	GCA_001528145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/145/GCA_001528145.1_ASM152814v1	-	MSMB1627WGS
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.76627	38.8	-	NGCT01	88	3659	3465	5/15/17	5/23/17	Contig	JCVI	SAMN06837781	GCA_002137095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/095/GCA_002137095.1_ASM213709v1	-	PR366
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA271006	271006	Proteobacteria	Gammaproteobacteria	4.7496	55.7	-	JZKN01	60	4629	4455	3/30/15	3/25/17	Contig	JCVI	SAMN03277190	GCA_000965815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/815/GCA_000965815.1_ASM96581v1	-	CIDEIMsCOL3
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.14035	55.1	-	LVVH01	74	5072	4785	4/25/16	4/6/17	Contig	JCVI	SAMN04572708	GCA_001631735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/735/GCA_001631735.1_ASM163173v1	-	GN06516
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.97873	64.1	-	FSNZ01	15	4991	4840	12/14/16	3/21/17	Scaffold	SC	SAMEA2150262	GCA_900139995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/995/GCA_900139995.1_10660_1_51	-	528
Pseudomonas sp. HMSC060F12	1715015	PRJNA296142	296142	Proteobacteria	Gammaproteobacteria	6.64261	66.3	-	LTQP01	163	6371	6159	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498492	GCA_001836625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/625/GCA_001836625.1_ASM183662v1	-	HMSC060F12
Streptomyces sp. WMMB 714	1286822	PRJNA187214	187214	Terrabacteria group	Actinobacteria	6.59492	71.7	-	LAND01	34	5622	5399	3/27/15	3/11/17	Scaffold	DOE Joint Genome Institute	SAMN02745759	GCA_000964305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/305/GCA_000964305.1_ASM96430v1	-	WMMB 714
Bacillus sp. L_1B0_5	1586646	PRJNA270566	270566	Terrabacteria group	Firmicutes	6.36008	34.7	-	JXIS01	258	6746	6352	2/12/15	4/10/17	Contig	University of Malaya	SAMN03273300	GCA_000836715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/836/715/GCA_000836715.1_ASM83671v1	-	L_1B0_5
Acinetobacter sp. 1564232	1310723	PRJNA194799	194799	Proteobacteria	Gammaproteobacteria	3.90474	39	-	JFEL02	23	3767	3418	3/3/14	4/10/17	Contig	Institute for Genome Sciences	SAMN02404527	GCA_000584815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/815/GCA_000584815.2_ASM58481v2	-	1564232
Sphingomonas sp. TZW2008	1917973	PRJDB5287	381305	Proteobacteria	Alphaproteobacteria	3.50267	67.2	-	BDJB01	24	3352	3265	4/1/17	5/6/17	Scaffold	SOKENDAI (The Graduate University for Advanced Studies)	SAMD00066625	GCA_002117915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/915/GCA_002117915.1_SpTZW2008_1.0	-	TZW2008
Clostridium sp. CAG:967	1262849	PRJEB1043	206709	Terrabacteria group	Firmicutes	2.00196	34.4	-	CAYN01	42	2072	2036	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138542	GCA_000433095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/095/GCA_000433095.1_MGS967	-	-
Rhodococcus sp. 06-235-1A	2022508	PRJNA395383	395383	Terrabacteria group	Actinobacteria	6.09525	64.3	-	NOYI01	37	5810	5644	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376378	GCA_002258785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/785/GCA_002258785.1_ASM225878v1	-	06-235-1A
Enterobacter sp. 50793107	1736700	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.33774	54.6	-	LNII01	178	5329	4999	12/9/15	4/11/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158317	GCA_001463365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/365/GCA_001463365.1_ASM146336v1	-	50793107
Staphylococcus sp. HMSC035F11	1715097	PRJNA296225	296225	Terrabacteria group	Firmicutes	2.85212	32.7	-	LTRN01	94	2962	2837	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498608	GCA_001836155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/155/GCA_001836155.1_ASM183615v1	-	HMSC035F11
Corynebacterium sp. HMSC072B08	1715136	PRJNA296264	296264	Terrabacteria group	Actinobacteria	2.48915	58.9	-	LTOS01	43	2192	2108	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498632	GCA_001837705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/705/GCA_001837705.1_ASM183770v1	-	HMSC072B08
Streptococcus sp. HMSC34B10	1608856	PRJNA274508	274508	Terrabacteria group	Firmicutes	1.72048	38.9	-	LTLL01	18	1747	1693	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498864	GCA_001839505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/505/GCA_001839505.1_ASM183950v1	-	HMSC34B10
Mycobacterium sp. E3198	1834143	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.80593	68.8	-	LZIS01	269	5653	5293	6/17/16	4/13/17	Contig	JCVI	SAMN04634211	GCA_001667015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/015/GCA_001667015.1_ASM166701v1	-	E3198
Prevotella sp. UBA1074	1947081	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.74058	45	-	DCCT01	155	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06450700	GCA_002316055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/055/GCA_002316055.1_ASM231605v1	28894102	-
Paenibacillus sp. St-s	1476856	PRJEB5951	242466	Terrabacteria group	Firmicutes	5.42488	47.4	-	FYER01	29	4831	4637	6/23/17	6/28/17	Contig	URMITE	SAMEA104136812	GCA_900188525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/525/GCA_900188525.1_PRJEB5951	-	St-s
Prochlorococcus sp. scB245a_521C8	1471526	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.966833	31.3	-	JFNY01	439	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671397	GCA_000635215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/215/GCA_000635215.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. 107	2039339	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.72928	30.2	-	NXBA01	85	1841	1662	9/27/17	9/27/17	Scaffold	University of California at Davis	SAMN05711872	GCA_002383835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/835/GCA_002383835.1_ASM238383v1	-	107
Rhizobium sp. GHKF11	1805001	PRJNA312606	312606	Proteobacteria	Alphaproteobacteria	5.2909	59.1	-	LVFG01	61	5064	4876	5/16/16	4/12/17	Scaffold	University of Houston	SAMN04500979	GCA_001644925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/925/GCA_001644925.1_GHKF11	-	GHKF11
Mesorhizobium sp. ORS3359	1505933	PRJEB6726	261149	Proteobacteria	Alphaproteobacteria	6.86917	63.5	-	CCNC01	214	6611	6366	9/15/14	4/10/17	Scaffold	IRD	SAMEA2677836	GCA_000824845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/845/GCA_000824845.1_Illumina_paired_reads_assembly_ORS3359	-	-
Microbacterium sp. UBA1612	1946942	PRJNA348753	348753	Terrabacteria group	Actinobacteria	3.07596	69.3	-	DCMW01	41	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454484	GCA_002321605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/605/GCA_002321605.1_ASM232160v1	28894102	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.79682	57	-	FXSN01	111	5856	5507	4/28/17	5/6/17	Scaffold	SC	SAMEA2609558	GCA_900182175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/182/175/GCA_900182175.1_14936_2_65	-	3189STDY5864918
Staphylococcus argenteus	985002	PRJEB20633	390605	Terrabacteria group	Firmicutes	2.80111	32.3	-	FXVQ01	109	2806	2606	6/15/17	7/5/17	Scaffold	Geogentics	SAMEA104034159	GCA_900183795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/795/GCA_900183795.1_O-4	-	-
Staphylococcus argenteus	985002	PRJEB20633	390605	Terrabacteria group	Firmicutes	2.79922	32.2	-	FXVM01	273	2772	2560	6/15/17	7/5/17	Scaffold	Geogentics	SAMEA104034162	GCA_900183805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/805/GCA_900183805.1_O-9	-	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.79625	57	-	FXSH01	98	5867	5500	4/28/17	5/6/17	Scaffold	SC	SAMEA2609563	GCA_900182185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/182/185/GCA_900182185.1_14936_2_68	-	3189STDY5864921
Mesorhizobium sp. WYCCWR 10019	2014805	PRJNA391216	391216	Proteobacteria	Alphaproteobacteria	6.68185	61.9	-	NPKH01	43	6650	6083	8/31/17	9/2/17	Scaffold	Zhengzhou University of Light Industry	SAMN07259541	GCA_002284535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/535/GCA_002284535.1_ASM228453v1	-	WYCCWR 10019
Rhizobium sp. AC44/96	1841654	PRJNA319063	319063	Proteobacteria	Alphaproteobacteria	6.10273	60.4	-	LXKO01	43	5835	5696	7/22/16	4/13/17	Scaffold	Oregon State University	SAMN04901295	GCA_001692185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/185/GCA_001692185.1_ASM169218v1	27547538	AC44/96
Campylobacter sp. 3	2039345	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.63603	30.6	-	NXBG01	40	1704	1606	9/27/17	9/27/17	Scaffold	University of California at Davis	SAMN06277492	GCA_002383925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/925/GCA_002383925.1_ASM238392v1	-	3
Prochlorococcus sp. scB245a_521K15	1471527	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.48292	31.3	-	JFNZ01	329	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671398	GCA_000635235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/235/GCA_000635235.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Paenibacillus sp. FJAT-27812	1684143	PRJNA290135	290135	Terrabacteria group	Firmicutes	7.37318	48.1	-	LIGH01	5	6407	6178	8/25/15	4/11/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN03853468	GCA_001273905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/905/GCA_001273905.1_ASM127390v1	-	FJAT-27812
Prevotella sp. UBA1705	1947086	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.01436	53.2	-	DCJH01	71	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06451240	GCA_002317385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/385/GCA_002317385.1_ASM231738v1	28894102	-
Mycobacterium sp. 852002-51057_SCH5723018	1834094	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.73794	67.5	-	LZIR01	132	5487	5220	6/17/16	4/12/17	Contig	JCVI	SAMN04692007	GCA_001667035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/035/GCA_001667035.1_ASM166703v1	-	852002-51057_SCH5723018
Streptococcus sp. HMSC36C04	1608868	PRJNA274520	274520	Terrabacteria group	Firmicutes	1.85498	38.9	-	LTLK01	49	1826	1701	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498868	GCA_001839535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/535/GCA_001839535.1_ASM183953v1	-	HMSC36C04
Corynebacterium sp. HMSC073H12	1715187	PRJNA296315	296315	Terrabacteria group	Actinobacteria	2.47337	58.7	-	LTOO01	19	2166	2082	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498696	GCA_001837775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/775/GCA_001837775.1_ASM183777v1	-	HMSC073H12
Staphylococcus sp. HMSC036D05	1715059	PRJNA296187	296187	Terrabacteria group	Firmicutes	2.53602	33.5	-	LTRJ01	23	2396	2317	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498590	GCA_001836225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/225/GCA_001836225.1_ASM183622v1	-	HMSC036D05
Enterobacter sp. 50858885	1736701	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	4.84199	55.1	-	LNIO01	136	4773	4523	12/9/15	4/11/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158323	GCA_001463465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/465/GCA_001463465.1_ASM146346v1	-	50858885
Rhodococcus sp. 06-1477-1B	2022485	PRJNA395383	395383	Terrabacteria group	Actinobacteria	8.8406	66.7	-	NOYP01	115	8296	7998	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376355	GCA_002258825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/825/GCA_002258825.1_ASM225882v1	-	06-1477-1B
Clostridium sp. CAG:921	1262847	PRJEB1035	206938	Terrabacteria group	Firmicutes	1.46663	27.4	-	CAYR01	129	1372	1350	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138544	GCA_000433135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/135/GCA_000433135.1_MGS921	-	-
Sphingomonas sp. IBVSS1	1985171	PRJNA384425	384425	Proteobacteria	Alphaproteobacteria	3.14762	66.7	-	NFUS01	11	3007	2908	5/10/17	5/22/17	Scaffold	University of Oslo	SAMN06840509	GCA_002127205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/205/GCA_002127205.1_ASM212720v1	-	IBVSS1
Acinetobacter sp. 1179249	1310790	PRJNA194866	194866	Proteobacteria	Gammaproteobacteria	3.93849	38.8	-	JFXC01	77	3872	3545	3/11/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02415043	GCA_000587995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/995/GCA_000587995.1_ASM58799v1	-	1179249
Bacillus sp. L_1B0_8	1588630	PRJNA270790	270790	Terrabacteria group	Firmicutes	6.02562	34.9	-	JXIT01	261	6358	5980	2/12/15	4/10/17	Contig	University of Malaya	SAMN03273299	GCA_000836745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/836/745/GCA_000836745.1_ASM83674v1	-	L_1B0_8
Streptomyces sp. NBRC 110030	1550033	PRJDB3172	297659	Terrabacteria group	Actinobacteria	8.12627	72.5	-	BBOK01	34	7258	6926	10/1/15	3/12/17	Scaffold	National Institute of Technology and Evaluation	SAMD00020839	GCA_001417675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/675/GCA_001417675.1_ASM141767v1	-	NBRC 110030
Pseudomonas sp. HMSC060G01	1715014	PRJNA296525	296525	Proteobacteria	Gammaproteobacteria	6.64302	66.3	-	LTQO01	147	6383	6160	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498673	GCA_001836645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/645/GCA_001836645.1_ASM183664v1	-	HMSC060G01
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15345	64	-	FSQL01	36	5225	4956	12/14/16	3/21/17	Scaffold	SC	SAMEA2259698	GCA_900141415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/415/GCA_900141415.1_11893_6_52	-	893
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.34145	55	-	LVUV01	159	5426	5014	4/25/16	4/6/17	Contig	JCVI	SAMN04572697	GCA_001631755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/755/GCA_001631755.1_ASM163175v1	-	GN05939
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA271006	271006	Proteobacteria	Gammaproteobacteria	5.25239	55.1	-	JZKX01	149	5223	4955	3/30/15	3/25/17	Contig	JCVI	SAMN03277200	GCA_000965895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/895/GCA_000965895.1_ASM96589v1	-	CIDEIMsCOL13
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.95518	38.7	-	NGCW01	61	3860	3689	5/15/17	5/23/17	Contig	JCVI	SAMN06837778	GCA_002137115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/115/GCA_002137115.1_ASM213711v1	-	PR369
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.42139	67.2	-	LPAU01	172	6703	6283	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449357	GCA_001528155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/155/GCA_001528155.1_ASM152815v1	-	MSMB1633WGS
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82848	64.2	-	CSZI01	84	4871	4507	3/24/15	3/18/17	Contig	SC	SAMEA1317711	GCA_001215705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/705/GCA_001215705.1_7520_7_34	-	PAP154
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.72855	56.8	-	NEYA01	107	4668	4441	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN04329636	GCA_002198935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/935/GCA_002198935.1_ASM219893v1	-	MOD1-comp46
Enterobacter cloacae subsp. cloacae	336306	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.98496	54.9	-	LPOT01	67	4824	4603	12/21/15	3/27/17	Contig	JCVI	SAMN04252941	GCA_001472955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/955/GCA_001472955.1_SMART_901.v1	-	SMART_901
Staphylococcus haemolyticus	1283	PRJNA375758	375758	Terrabacteria group	Firmicutes	2.75133	33.1	-	NCXH01	619	2627	2498	8/29/17	8/30/17	Contig	SysMilk	SAMN06718480	GCA_002276975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/975/GCA_002276975.1_ASM227697v1	-	OG2
Cutibacterium acnes	1747	PRJNA323688	323688	Terrabacteria group	Actinobacteria	2.46677	60	-	LZCQ01	132	2519	2345	6/10/16	4/5/17	Contig	Aarhus University	SAMN05185389	GCA_001661015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/661/015/GCA_001661015.1_ASM166101v1	-	37.1.L1
Burkholderia sp. TNe-862	416944	PRJEB15471	343908	Proteobacteria	Betaproteobacteria	7.1516	64.9	-	FMYQ01	89	6414	6121	10/20/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421548	GCA_900096975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/096/975/GCA_900096975.1_IMG-taxon_2675903029_annotated_assembly	-	TNe-862
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64908	31.4	-	CUUO01	16	1696	1605	3/31/15	3/18/17	Contig	SC	SAMEA1400943	GCA_001229385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/385/GCA_001229385.1_7213_3_58	-	OXC6601
Lactobacillus plantarum	1590	PRJNA314109	314109	Terrabacteria group	Firmicutes	3.46917	44.1	-	LUXG01	78	3402	3205	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04528879	GCA_001633665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/665/GCA_001633665.1_ASM163366v1	-	Nizo2891
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.15999	59.9	-	JVZG01	77	4819	4692	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197158	GCA_001062285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/285/GCA_001062285.1_ASM106228v1	26230489	1198.rep1_SMAR
Yersinia enterocolitica	630	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.56322	46.9	-	CPWH01	173	4319	4069	3/22/15	3/26/17	Scaffold	SC	SAMEA859973	GCA_001136265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/265/GCA_001136265.1_4840_6_6	-	2/C/53NMD7
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.4523	53.5	-	LSWE01	34	2367	2191	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496976	GCA_002202585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/585/GCA_002202585.1_S50	-	2792
Staphylococcus aureus	1280	PRJNA39571	39571	Terrabacteria group	Firmicutes	2.66466	32.9	chromosome:NZ_CP014791.1/CP014791.1	-	1	2717	2558	3/21/16	3/6/17	Complete Genome	Marshfield Clinic Research Foundation	SAMN02953006	GCA_001594205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/205/GCA_001594205.1_ASM159420v1	27174283	MCRF184
Brucella melitensis 64/150	1160220	PRJNA173588	173588	Proteobacteria	Alphaproteobacteria	3.29783	57.2	-	AQNC01	16	3379	3153	4/16/13	4/1/17	Contig	Broad Institute	SAMN00811206	GCA_000366845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/845/GCA_000366845.1_Bruc_meli_64_150_V1	-	64/150
Lactobacillus rhamnosus	47715	PRJNA407882	407882	Terrabacteria group	Firmicutes	2.9501	46.7	-	NXEW01	59	3095	2863	10/1/17	10/1/17	Contig	McGill University	SAMN07665578	GCA_002406745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/406/745/GCA_002406745.1_ASM240674v1	-	P4
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.4096	40.2	-	LQFH01	38	2321	2209	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366555	GCA_001931265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/265/GCA_001931265.1_ASM193126v1	-	2969PM
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12921	41.2	-	CWDJ01	79	2052	1887	6/23/15	3/26/17	Contig	SC	SAMEA1032867	GCA_001176865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/865/GCA_001176865.1_6903_6_9	-	EQUI0154
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.79482	66	-	JVUI01	71	4428	4276	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197286	GCA_001069645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/645/GCA_001069645.1_ASM106964v1	26230489	131_SMAL
Enterococcus faecium EnGen0015	1138888	PRJNA82427	82427	Terrabacteria group	Firmicutes	2.76986	38.3	-	AHWP01	6	2792	2556	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779868	GCA_000321625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/625/GCA_000321625.1_Ente_faec_E1007_V1	-	E1007
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.09907	52.6	-	CQOC01	77	2478	2134	3/22/15	4/11/17	Contig	SC	SAMEA1690403	GCA_001100765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/765/GCA_001100765.1_8727_8_60	-	GCGS156
Streptococcus mutans NFSM1	857130	PRJNA49803	49803	Terrabacteria group	Firmicutes	2.00211	36.9	-	AHSG01	131	2011	1882	2/11/13	3/23/17	Contig	Cornell University	SAMN02429027	GCA_000339395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/395/GCA_000339395.1_ASM33939v1	23228887	NFSM1
Enterococcus faecalis EnGen0073	1151197	PRJNA85645	85645	Terrabacteria group	Firmicutes	2.97081	37.5	-	AIIV01	11	2983	2856	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00792302	GCA_000390725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/725/GCA_000390725.1_Ente_faec_2924_V1	-	2924
Clostridium botulinum	1491	PRJNA257008	257008	Terrabacteria group	Firmicutes	3.81767	27.2	-	LGII01	29	3582	3391	8/21/15	3/26/17	Contig	µFORGE	SAMN03787460	GCA_001273195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/195/GCA_001273195.1_CBOT003-SEQ-1-ASM-1	-	ATCC 23387
Staphylococcus aureus subsp. aureus Tager 104	1381115	PRJNA213989	213989	Terrabacteria group	Firmicutes	2.82084	32.9	chromosome:NZ_CP012409.1/CP012409.1	-	1	2945	2678	3/8/16	3/6/17	Complete Genome	Auburn University	SAMN02393830	GCA_000452385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/385/GCA_000452385.2_ASM45238v2	"2,402,975,726,940,860"	Tager 104
Bacillus subtilis	1423	PRJNA288072	288072	Terrabacteria group	Firmicutes	4.26356	43.3	-	LFOC01	24	4499	4356	7/27/15	3/26/17	Contig	Agricultural Research Organisation	SAMN03793169	GCA_001187765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/765/GCA_001187765.1_BSMS1577	-	MS1577
Vibrio parahaemolyticus NIHCB0603	1238213	PRJNA176648	176648	Proteobacteria	Gammaproteobacteria	5.22522	45.4	-	AVOM01	13	5010	4763	8/22/13	4/10/17	Contig	IGS	SAMN02189718	GCA_000454265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/265/GCA_000454265.1_ASM45426v1	-	NIHCB0603
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.04759	38	-	MLLO01	653	2118	1775	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297028	GCA_001868225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/225/GCA_001868225.1_ASM186822v1	27118061	AWRIB151
Xanthomonas oryzae pv. oryzae	64187	PRJNA269447	269447	Proteobacteria	Gammaproteobacteria	4.31069	63.9	-	JXFR01	419	4325	3471	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252556	GCA_001928615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/615/GCA_001928615.1_ASM192861v1	-	IXO92
Xanthomonas citri subsp. citri	611301	PRJNA261284	261284	Proteobacteria	Gammaproteobacteria	5.33472	64.7369	plasmid pXCC48:NZ_CM007641.1/CM007641.1; plasmid pXCC55:NZ_CM007642.1/CM007642.1	JRON01	183	4908	4483	1/18/17	4/6/17	Contig	National Institute of Genetic Engineering and Biotechnology	SAMN03070127	GCA_001956275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/275/GCA_001956275.1_ASM195627v1	-	NIGEB-386
Brucella abortus bv. 1 str. BCB013	1210451	PRJNA170709	170709	Proteobacteria	Alphaproteobacteria	3.27351	57.3	-	ALOI02	297	3372	3121	8/20/12	3/23/17	Contig	Beijing Institute of Disease Control and Prevention	SAMN02469333	GCA_000292205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/205/GCA_000292205.2_V02_for_genome_sequence_of_BCB013	-	BCB013
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.86465	32.3	-	MRJT01	96	2013	1553	4/19/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773914	GCA_002100245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/245/GCA_002100245.1_ASM210024v1	28348839	FSC028
Clostridioides difficile CD160	1151292	PRJNA85757	85757	Terrabacteria group	Firmicutes	4.75954	28.2	-	AVHW01	114	4588	4330	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766591	GCA_000449425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/425/GCA_000449425.2_ASM44942v2	-	CD160
Vibrio cholerae HC-62B1	992007	PRJNA64021	64021	Proteobacteria	Gammaproteobacteria	4.02853	47.5	-	AJSO01	71	3834	3667	10/15/12	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00752541	GCA_000305625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/625/GCA_000305625.2_ASM30562v2	-	HC-62B1
Bacillus thuringiensis serovar brasilensis	180873	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.9962	35	-	NFCU01	70	6488	6028	5/17/17	5/24/17	Contig	Huazhong Agricultural University	SAMN05934510	GCA_002146985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/985/GCA_002146985.1_ASM214698v1	-	BGSC 4AY1
Chlamydia trachomatis	813	PRJNA328474	328474	PVC group	Chlamydiae	1.05195	41.2636	chromosome:NZ_CP016424.1/CP016424.1; plasmid unnamed1:NZ_CP016425.1/CP016425.1	-	2	979	902	9/16/16	3/28/17	Chromosome	London School of Hygiene & Tropical Medicine	SAMN05372051	GCA_001729885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/885/GCA_001729885.1_ASM172988v1	-	SB013112
Burkholderia pseudomallei	28450	PRJNA244252	244252	Proteobacteria	Betaproteobacteria	7.3249	68	-	JPNP01	2	7610	6929	9/23/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02849416	GCA_000756925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/925/GCA_000756925.1_BEB	25414490	BEB
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	6.86363	66.9	-	MUSZ01	103	6634	6270	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001892	GCA_001992275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/275/GCA_001992275.1_ASM199227v1	-	VC10925
Bacteroides fragilis	817	PRJNA288885	288885	FCB group	Bacteroidetes/Chlorobi group	5.2128	43.2	-	LIDT01	52	4625	4358	8/4/16	4/10/17	Contig	NIH/ NIDDK	SAMN03839334	GCA_001699855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/855/GCA_001699855.1_ASM169985v1	27348220	20793-3
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.82873	50.7	-	NQBX01	153	5127	4666	8/11/17	8/15/17	Contig	JCVI	SAMN07450631	GCA_002247765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/765/GCA_002247765.1_ASM224776v1	-	ECSW+08
Legionella pneumophila	446	PRJNA280928	280928	Proteobacteria	Gammaproteobacteria	3.25146	38.1	-	LBAE01	42	2965	2840	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03480704	GCA_001582485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/485/GCA_001582485.1_ASM158248v1	26888563	WD_4_1102a
Pseudomonas syringae pv. syringae CRAFRU11	1352938	PRJNA210127	210127	Proteobacteria	Gammaproteobacteria	5.8593	59.1	-	ATSU01	179	5219	4974	4/15/15	3/26/17	Contig	CRA	SAMN03482996	GCA_000972155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/155/GCA_000972155.1_ASM97215v1	-	CRAFRU11
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.16634	41.1	-	CECR01	80	2160	2018	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233875	GCA_000876755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/755/GCA_000876755.1_Velvet_assembly	-	type strain: LL-
Streptococcus agalactiae GB00975	1154965	PRJNA86603	86603	Terrabacteria group	Firmicutes	2.111	35.4	-	ALUY01	95	2207	2030	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991367	GCA_000288635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/635/GCA_000288635.1_ASM28863v1	-	GB00975
Acinetobacter baumannii NIPH 329	1217632	PRJNA183257	183257	Proteobacteria	Gammaproteobacteria	4.00575	39.1	-	APQY01	8	3833	3685	4/16/13	3/15/17	Scaffold	Broad Institute	SAMN01828148	GCA_000369225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/225/GCA_000369225.1_Acin_baum_NIPH_329_V1	-	NIPH 329
Pseudomonas aeruginosa PAO1-VE13	1367494	PRJNA212862	212862	Proteobacteria	Gammaproteobacteria	6.26548	66.6	chromosome:NC_022594.1/CP006832.1	-	1	5913	5776	10/28/13	3/15/17	Chromosome	Marshall University School of Medicine	SAMN02603590	GCA_000484545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/545/GCA_000484545.1_ASM48454v1	24336371	PAO1-VE13
Shigella flexneri Shi06AH66	1434128	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.44135	50.4	-	AZOG01	335	4906	4241	1/29/14	2/23/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437363	GCA_000565505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/505/GCA_000565505.1_ASM56550v1	24452172	Shi06AH66
Bacillus anthracis	1392	PRJNA257008	257008	Terrabacteria group	Firmicutes	5.45873	35.1	-	LGIG01	42	6132	5730	8/21/15	3/26/17	Contig	µFORGE	SAMN03757461	GCA_001273125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/125/GCA_001273125.1_BANT013-SEQ-1-ASM-1	-	K8215
Leptospira interrogans serovar Copenhageni str. Fiocruz LV4160	1291330	PRJNA188996	188996	Spirochaetes	Spirochaetia	4.61778	35	-	AOVU01	155	4124	3758	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920591	GCA_000343575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/575/GCA_000343575.1_CA_glsol102	-	Fiocruz LV4160
Streptococcus pyogenes ABC020052203	1439205	PRJNA233182	233182	Terrabacteria group	Firmicutes	1.81277	38.4	-	JJGL01	6	1845	1734	4/14/14	4/10/17	Scaffold	Broad Institute	SAMN02567531	GCA_000630365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/365/GCA_000630365.1_Stre_pyog_ABC020052203_V1	-	ABC020052203
Neisseria meningitidis	487	PRJNA244828	244828	Proteobacteria	Betaproteobacteria	2.03491	51.8	-	JMDB01	99	2290	1994	7/20/15	3/21/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02729217	GCA_001183285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/285/GCA_001183285.1_Nm100514	25989189	100514
Helicobacter pylori	210	PRJDB4296	362565	Proteobacteria	delta/epsilon subdivisions	1.56683	38.9	chromosome:AP017336.1	-	1	1568	1533	1/18/17	1/18/17	Chromosome	"Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture"	SAMD00042467	GCA_002357575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/575/GCA_002357575.1_ASM235757v1	-	F21
Streptococcus pneumoniae str. Canada MDR_19F	637988	PRJNA33807	33807	Terrabacteria group	Firmicutes	1.98663	39.7	-	ACNV01	277	2141	1962	12/10/09	3/9/17	Contig	Ontario Agency for Health Protection and Promotion	SAMN02470768	GCA_000174875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/875/GCA_000174875.1_ASM17487v1	20042094	Canada MDR_19F
Staphylococcus aureus	1280	PRJNA277068	277068	Terrabacteria group	Firmicutes	2.81542	32.9	chromosome:NZ_CP010998.1/CP010998.1	-	1	2925	2760	3/7/16	3/5/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN03387935	GCA_001580495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/495/GCA_001580495.1_ASM158049v1	-	FORC_012
Mycobacterium tuberculosis TRS25	1334071	PRJNA203183	203183	Terrabacteria group	Actinobacteria	4.41153	65.6	chromosome:NZ_CP009192.1/CP009192.1	-	1	4289	4101	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837645	GCA_002000905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/905/GCA_002000905.1_ASM200090v1	27261264	TRS25
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.9327	38.1	-	FFIA01	27	1969	1819	2/9/16	3/27/17	Scaffold	SC	SAMEA2674705	GCA_900020195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/195/GCA_900020195.1_14412_4_4	-	2842STDY5882032
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.39736	68.6	-	BDNP01	1062	4890	4662	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076667	GCA_002089515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/515/GCA_002089515.1_ASM208951v1	28045086	IH-788
Lactococcus lactis subsp. cremoris	1359	PRJNA277809	277809	Terrabacteria group	Firmicutes	2.86238	35.3	-	LAVW01	176	3044	2581	5/8/15	4/3/17	Scaffold	Teagasc	SAMN03396924	GCA_001005395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/395/GCA_001005395.1_ASM100539v1	-	DPC6856
Bacillus cereus ISP3191	1053216	PRJNA70399	70399	Terrabacteria group	Firmicutes	5.37112	35.3	-	AHEK01	4	5787	5467	8/15/12	6/19/17	Scaffold	Broad Institute	SAMN02596848	GCA_000291135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/135/GCA_000291135.1_Baci_cere_ISP3191_V1	-	ISP3191
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.62108	31.9	-	JVVB01	113	2586	2467	7/10/15	3/26/17	Contig	University of Washington	SAMN03197267	GCA_001069515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/515/GCA_001069515.1_ASM106951v1	26230489	1295_SEPI
Staphylococcus aureus subsp. aureus	46170	PRJNA288685	288685	Terrabacteria group	Firmicutes	3.04655	32.9	chromosome:NZ_CP012011.1/CP012011.1	-	1	3246	3054	1/15/16	3/5/17	Complete Genome	LNCC	SAMN03835492	GCA_001515745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/745/GCA_001515745.1_ASM151574v1	-	HC1340
Pseudomonas fluorescens	294	PRJNA262724	262724	Proteobacteria	Gammaproteobacteria	6.19761	59.8	-	LCYB01	63	5675	5463	1/29/16	4/4/17	Scaffold	University of Padova	SAMN03085510	GCA_001542705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/705/GCA_001542705.1_ASM154270v1	-	Ps_77
Yersinia pestis biovar Orientalis str. BA200901799	1084226	PRJNA72923	72923	Proteobacteria	Gammaproteobacteria	4.58111	47.5	-	AGJS01	199	4329	4124	3/22/12	5/19/17	Contig	US Army Edgewood Chemical Biological Center	SAMN01831184	GCA_000255735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/735/GCA_000255735.1_ASM25573v1	22359605	BA200901799
Staphylococcus aureus subsp. aureus	46170	PRJNA288686	288686	Terrabacteria group	Firmicutes	2.97637	32.9	chromosome:NZ_CP012012.1/CP012012.1	-	1	3154	2942	1/15/16	3/5/17	Complete Genome	LNCC	SAMN03835494	GCA_001515765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/765/GCA_001515765.1_ASM151576v1	-	HC1335
Staphylococcus aureus	1280	PRJNA263760	263760	Terrabacteria group	Firmicutes	2.7098	32.9	chromosome:NZ_CP009828.1/CP009828.1	-	1	2809	2624	12/3/15	3/5/17	Complete Genome	"Nanshan Hospital of Guangdong Medical College, Shenzhen, China;"	SAMN03145755	GCA_001456215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/215/GCA_001456215.1_ASM145621v1	-	MS4
Staphylococcus aureus	1280	PRJNA279236	279236	Terrabacteria group	Firmicutes	2.84981	32.9	chromosome:NZ_CP011147.1/CP011147.1	-	1	2974	2820	4/6/15	3/4/17	Complete Genome	Universidade de Sao Paulo	SAMN03444404	GCA_000969225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/225/GCA_000969225.1_ASM96922v1	26272570	FCFHV36
Staphylococcus aureus	1280	PRJEB6577	259904	Terrabacteria group	Firmicutes	2.8743	32.9	chromosome I:NZ_LN626917.1/LN626917.1	-	1	3011	2799	10/30/14	3/4/17	Complete Genome	SLU-GBC	SAMEA2743223	GCA_000953255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/255/GCA_000953255.1_Staphylococcus_aureus_Sa_ILRI_217	-	ILRI_Eymole1/1
Staphylococcus aureus subsp. aureus	46170	PRJNA264181	264181	Terrabacteria group	Firmicutes	3.04621	32.9	chromosome:NZ_CP009681.1/CP009681.1	-	1	3264	3016	10/28/14	3/4/17	Complete Genome	LNCC	SAMN03144721	GCA_000769575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/575/GCA_000769575.1_ASM76957v1	27152133	Gv69
Staphylococcus xylosus	1288	PRJEB6876	256951	Terrabacteria group	Firmicutes	2.78669	32.9	chromosome 1:NZ_LN554884.1/LN554884.1	-	1	2640	2519	9/9/14	4/3/17	Complete Genome	INRA-MIG	SAMEA2674919	GCA_000953575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/575/GCA_000953575.1_Staphylococcus_xylosus_C2a	-	C2a
Yersinia pestis biovar Orientalis str. AS200901539	1084227	PRJNA73099	73099	Proteobacteria	Gammaproteobacteria	4.57213	47.5	-	AGJT01	250	4332	4051	3/22/12	5/19/17	Contig	US Army Edgewood Chemical Biological Center	SAMN01831182	GCA_000255755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/755/GCA_000255755.1_ASM25575v1	22359605	AS200901539
Pseudomonas fluorescens	294	PRJNA262723	262723	Proteobacteria	Gammaproteobacteria	6.42981	59.5	-	LCYA01	357	6528	5133	1/29/16	4/4/17	Scaffold	University of Padova	SAMN03085509	GCA_001542715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/715/GCA_001542715.1_ASM154271v1	-	Ps_22
Staphylococcus aureus subsp. aureus SA268	1368166	PRJNA213166	213166	Terrabacteria group	Firmicutes	2.8339	32.9	chromosome:NZ_CP006630.1/CP006630.1	-	1	2950	2753	8/4/14	3/4/17	Complete Genome	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN02261725	GCA_000737615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/615/GCA_000737615.1_ASM73761v1	-	SA268
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.42812	32	-	JVVA01	111	2357	2262	7/10/15	3/26/17	Contig	University of Washington	SAMN03197268	GCA_001069525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/525/GCA_001069525.1_ASM106952v1	26230489	1296_SEPI
Bacillus cereus MC67	1053219	PRJNA70405	70405	Terrabacteria group	Firmicutes	5.90923	35.8	-	AHEN01	7	6053	5556	8/15/12	6/15/17	Scaffold	Broad Institute	SAMN02596851	GCA_000291155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/155/GCA_000291155.1_Baci_cere_MC67_V1	-	MC67
Lactococcus lactis subsp. lactis	1360	PRJNA222257	222257	Terrabacteria group	Firmicutes	2.24545	35.1	-	JQCM01	45	2215	2054	11/6/15	4/4/17	Scaffold	Shanghai Majorbio	SAMN02797796	GCA_001437565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/437/565/GCA_001437565.1_ASM143756v1	26415554	LMG 7760
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.10625	69.1	-	BDNQ01	402	4871	4526	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076668	GCA_002089535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/535/GCA_002089535.1_ASM208953v1	28045086	IH-799
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.81488	38	-	FFHZ01	13	1823	1696	2/9/16	3/27/17	Scaffold	SC	SAMEA2674683	GCA_900022475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/475/GCA_900022475.1_14412_3_88	-	2842STDY5882021
Mycobacterium tuberculosis TRS10	1334056	PRJNA203168	203168	Terrabacteria group	Actinobacteria	4.41153	65.3	chromosome:NZ_CP009195.1/CP009195.1	-	1	4314	4064	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837630	GCA_002000925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/925/GCA_002000925.1_ASM200092v1	27261264	TRS10
Staphylococcus xylosus	1288	PRJNA241308	241308	Terrabacteria group	Firmicutes	2.75756	32.9	chromosome:NZ_CP008724.1/CP008724.1	-	1	2573	2475	6/17/14	4/2/17	Complete Genome	Universite Laval	SAMN02850631	GCA_000709415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/415/GCA_000709415.1_ASM70941v1	-	SMQ-121
Streptococcus pneumoniae BS455	595501	PRJNA33845	33845	Terrabacteria group	Firmicutes	2.08412	39.6	-	ADHN01	113	2277	2042	8/11/10	3/8/17	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393772	GCA_000177775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/775/GCA_000177775.1_ASM17777v1	-	BS455
Helicobacter pylori	210	PRJDB4296	362565	Proteobacteria	delta/epsilon subdivisions	1.5587	38.9	chromosome:AP017337.1	-	1	1543	1505	1/18/17	1/18/17	Chromosome	"Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture"	SAMD00042470	GCA_002357595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/595/GCA_002357595.1_ASM235759v1	-	F23
Neisseria meningitidis	487	PRJNA244831	244831	Proteobacteria	Betaproteobacteria	2.14778	51.5	-	JMDC01	87	2468	2084	7/20/15	3/21/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02729218	GCA_001183295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/295/GCA_001183295.1_Nm421007	25989189	421007
Streptococcus pyogenes ABC020050731	1439193	PRJNA233179	233179	Terrabacteria group	Firmicutes	1.77652	38.4	-	JJGM01	5	1786	1677	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567528	GCA_000630385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/385/GCA_000630385.1_Stre_pyog_ABC020050731_V1	-	ABC020050731
Leptospira interrogans serovar Copenhageni str. 200701182	1291329	PRJNA188995	188995	Spirochaetes	Spirochaetia	4.57198	35	-	AOVV01	155	4087	3725	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920617	GCA_000343595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/595/GCA_000343595.1_CA_glsol101	-	200701182
Bacillus anthracis	1392	PRJNA257008	257008	Terrabacteria group	Firmicutes	5.47794	35.2	-	LGID01	116	6131	5734	8/21/15	3/26/17	Contig	µFORGE	SAMN03757453	GCA_001273145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/145/GCA_001273145.1_BANT014-SEQ-1-ASM-1	-	PAK-1
Shigella flexneri Shi06GS43	1434129	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.52201	50.5	-	AZOH01	307	5038	4336	1/29/14	2/23/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437364	GCA_000565525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/525/GCA_000565525.1_ASM56552v1	24452172	Shi06GS43
Pseudomonas aeruginosa LESlike5	1408276	PRJNA222522	222522	Proteobacteria	Gammaproteobacteria	6.54335	66.4	chromosome:NZ_CP006980.1/CP006980.1	-	1	6224	6049	3/3/14	3/16/17	Chromosome	"IBIS, University Laval"	SAMN03081515	GCA_000583895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/895/GCA_000583895.1_ASM58389v1	-	LESlike5
Acinetobacter baumannii NIPH 601	1217637	PRJNA183256	183256	Proteobacteria	Gammaproteobacteria	4.05965	39.1	-	APQZ01	10	3876	3645	4/16/13	3/15/17	Scaffold	Broad Institute	SAMN01828147	GCA_000369245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/245/GCA_000369245.1_Acin_baum_NIPH_601_V1	-	NIPH 601
Streptococcus agalactiae GB00984	1154966	PRJNA86605	86605	Terrabacteria group	Firmicutes	2.14833	35.5	-	ALUZ01	56	2248	2107	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991368	GCA_000288655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/655/GCA_000288655.1_ASM28865v1	-	GB00984
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.15427	41	-	CEED01	107	2126	1965	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233914	GCA_000876795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/795/GCA_000876795.1_Velvet_assembly	-	LS3S
Pseudomonas syringae pv. syringae CRAFRU12	1352939	PRJNA210128	210128	Proteobacteria	Gammaproteobacteria	5.93313	59.4	-	ATSV01	246	5357	5060	4/15/15	3/26/17	Contig	CRA	SAMN03482997	GCA_000972195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/195/GCA_000972195.1_ASM97219v1	-	CRAFRU12
Legionella pneumophila	446	PRJNA281157	281157	Proteobacteria	Gammaproteobacteria	3.4426	38.2	-	LBAF01	38	3122	2973	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03483417	GCA_001582535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/535/GCA_001582535.1_ASM158253v1	26888563	SZ069
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.98019	50.6	-	NQBW01	93	5122	4812	8/11/17	8/15/17	Contig	JCVI	SAMN07450632	GCA_002247775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/775/GCA_002247775.1_ASM224777v1	-	ECSW+07
Bacteroides fragilis	817	PRJNA288885	288885	FCB group	Bacteroidetes/Chlorobi group	5.21082	43.096	plasmid pBFP53:NZ_CM004523.1/CM004523.1	LIDV01	140	4587	4344	8/4/16	4/5/17	Contig	NIH/ NIDDK	SAMN03839333	GCA_001699865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/865/GCA_001699865.1_ASM169986v1	27348220	2-078382-3
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.45145	67.1	-	MUSX01	145	7157	6672	2/10/17	3/30/17	Contig	University of British Columbia	SAMN05001890	GCA_001992285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/285/GCA_001992285.1_ASM199228v1	-	VC9478
Burkholderia pseudomallei	28450	PRJNA244254	244254	Proteobacteria	Betaproteobacteria	7.26867	67.9	-	JPNQ01	13	7635	6898	9/23/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02849517	GCA_000756975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/975/GCA_000756975.1_BED	25414490	BED
Chlamydia trachomatis	813	PRJNA328474	328474	PVC group	Chlamydiae	1.05187	41.2637	chromosome:NZ_CP016426.1/CP016426.1; plasmid unnamed1:NZ_CP016427.1/CP016427.1	-	2	980	899	9/16/16	3/28/17	Chromosome	London School of Hygiene & Tropical Medicine	SAMN05372052	GCA_001729905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/905/GCA_001729905.1_ASM172990v1	-	SB013321
Bacillus thuringiensis serovar pondicheriensis	180874	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.7019	35.2	-	NFCX01	42	6300	6010	5/17/17	5/24/17	Contig	Huazhong Agricultural University	SAMN05934513	GCA_002147005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/005/GCA_002147005.1_ASM214700v1	-	BGSC 4BA1
Vibrio cholerae HC-55B2	991971	PRJNA63949	63949	Proteobacteria	Gammaproteobacteria	3.93401	47.8	-	AJSM01	109	3726	3522	10/15/12	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00760470	GCA_000305645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/645/GCA_000305645.2_ASM30564v2	-	HC-55B2
Clostridioides difficile CD165	1151293	PRJNA85759	85759	Terrabacteria group	Firmicutes	4.08665	28.6	-	AVHX01	99	3791	3594	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766592	GCA_000449445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/445/GCA_000449445.2_ASM44944v2	-	CD165
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.85241	32.3	-	MRJS01	96	2007	1554	4/19/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773915	GCA_002100265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/265/GCA_002100265.1_ASM210026v1	28348839	FSC029
Brucella abortus bv. 1 str. 134	1229907	PRJNA174380	174380	Proteobacteria	Alphaproteobacteria	3.24856	57.3	-	AMPC01	141	3332	3110	9/19/12	3/23/17	Contig	Beijing Institute of Disease Control and Prevention	SAMN02469348	GCA_000298635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/635/GCA_000298635.1_V1.0_of_Brucella_abortus_bv.1_str_134	23144404	134
Xanthomonas citri subsp. citri	611301	PRJNA338819	338819	Proteobacteria	Gammaproteobacteria	5.14163	64.6	-	MDJT01	206	4687	4321	3/6/17	3/9/17	Contig	CSIR-Institute of Microbial Technology	SAMN05571463	GCA_002018575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/575/GCA_002018575.1_ASM201857v1	-	LMG9322
Xanthomonas oryzae pv. oryzae	64187	PRJNA269449	269449	Proteobacteria	Gammaproteobacteria	4.32706	63.9	-	JXFT01	430	4362	3488	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252581	GCA_001928625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/625/GCA_001928625.1_ASM192862v1	-	IXO97
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.99438	38.1	-	MLLS01	323	2071	1814	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297032	GCA_001868265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/265/GCA_001868265.1_ASM186826v1	27118061	AWRIB215
Vibrio parahaemolyticus 949	1238199	PRJNA176633	176633	Proteobacteria	Gammaproteobacteria	5.17924	45.4	-	AVPV01	7	4966	4712	8/23/13	3/24/17	Contig	IGS	SAMN02190054	GCA_000454455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/455/GCA_000454455.1_ASM45445v1	-	949
Bacillus subtilis	1423	PRJEB9876	290051	Terrabacteria group	Firmicutes	4.04436	43.7	-	CYHS01	125	4137	3998	8/27/15	4/10/17	Contig	University of Liverpool	SAMEA3484408	GCA_001286745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/745/GCA_001286745.1_Bacillus_JRS9	-	-
Staphylococcus aureus subsp. aureus SA957	1201010	PRJNA167119	167119	Terrabacteria group	Firmicutes	2.78954	32.9	chromosome:NC_022442.1/CP003603.1	-	1	2884	2696	9/24/13	3/2/17	Complete Genome	Chang Gung Memorial Hospital	SAMN00996491	GCA_000470845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/845/GCA_000470845.1_ASM47084v1	24039691	SA957
Clostridium botulinum	1491	PRJNA257008	257008	Terrabacteria group	Firmicutes	3.81361	27.2	-	LGIJ01	57	3486	3313	8/21/15	3/26/17	Contig	µFORGE	SAMN03787461	GCA_001273225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/225/GCA_001273225.1_CBOT005-SEQ-1-ASM-1	-	ATCC 9564
Enterococcus faecalis EnGen0078	1151198	PRJNA85647	85647	Terrabacteria group	Firmicutes	2.97336	37.4	-	AIIW01	10	3040	2873	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00792303	GCA_000390745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/745/GCA_000390745.1_Ente_faec_7330082-2_V1	-	7330082-2
Streptococcus mutans NV1996	857123	PRJNA49817	49817	Terrabacteria group	Firmicutes	2.01516	36.8	-	AHSN01	130	2011	1881	2/11/13	3/23/17	Contig	Cornell University	SAMN02429029	GCA_000339415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/415/GCA_000339415.1_ASM33941v1	23228887	NV1996
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14922	52.5	-	CQIS01	92	2544	2200	3/23/15	4/11/17	Contig	SC	SAMEA1690415	GCA_001101525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/525/GCA_001101525.1_8727_8_88	-	GCGS184
Enterococcus faecium EnGen0017	1138889	PRJNA82429	82429	Terrabacteria group	Firmicutes	2.81462	38	-	AHWQ01	9	2894	2656	12/17/12	3/24/17	Scaffold	Broad Institute	SAMN00779801	GCA_000321645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/645/GCA_000321645.1_Ente_faec_E1050_V1	-	E1050
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.96296	66.6	-	JVTZ01	223	4707	4490	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197295	GCA_001069685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/685/GCA_001069685.1_ASM106968v1	26230489	1318_SMAL
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.16018	41.1	-	CWFL01	72	2104	1932	6/23/15	3/26/17	Contig	SC	SAMEA1032868	GCA_001176885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/885/GCA_001176885.1_6817_1_62	-	EQUI0015
Pasteurella multocida	747	PRJNA306895	306895	Proteobacteria	Gammaproteobacteria	2.28309	40.2	-	LQGS01	41	2164	2068	1/4/17	4/6/17	Scaffold	"University of California, Davis"	SAMN04366592	GCA_001931455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/455/GCA_001931455.1_ASM193145v1	-	J1APM
Lactobacillus rhamnosus HN001	486408	PRJNA29219	29219	Terrabacteria group	Firmicutes	2.91441	46.7387	plasmid pLR001:NC_011223.1/CP001155.1; plasmid pLR002:NC_011225.1/CP001156.1	ABWJ01	96	2953	2766	9/11/08	4/1/17	Scaffold	Fonterra Research Centre	SAMN02469790	GCA_000173255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/255/GCA_000173255.2_ASM17325v2	-	HN001
Brucella melitensis 66/59	1160224	PRJNA173632	173632	Proteobacteria	Alphaproteobacteria	3.2977	57.2	-	AQND01	12	3378	3156	4/16/13	4/1/17	Contig	Broad Institute	SAMN00811207	GCA_000366865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/865/GCA_000366865.1_Bruc_meli_66_59_V1	-	66/59
Staphylococcus aureus subsp. aureus SA40	1194085	PRJNA167373	167373	Terrabacteria group	Firmicutes	2.72831	32.9	chromosome:NC_022443.1/CP003604.1	-	1	2794	2606	9/24/13	3/2/17	Complete Genome	Chang Gung Memorial Hospital	SAMN02603110	GCA_000470865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/865/GCA_000470865.1_ASM47086v1	24039691	SA40
Corynebacterium diphtheriae bv. mitis	1806053	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.40068	53.6	-	LSWD01	55	2325	2124	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496975	GCA_002202595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/595/GCA_002202595.1_S49	-	2686
Yersinia enterocolitica	630	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	4.51003	47	-	CQBQ01	93	4260	3995	3/23/15	3/26/17	Scaffold	SC	SAMEA1486301	GCA_001139785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/785/GCA_001139785.1_8016_2_64	-	IP20322
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.1636	59.6	-	JVNH01	108	4895	4779	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197469	GCA_001063125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/125/GCA_001063125.1_ASM106312v1	26230489	276_SMAR
Lactobacillus plantarum	1590	PRJNA314108	314108	Terrabacteria group	Firmicutes	3.29115	44.4	-	LUXF01	65	3205	3008	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04528877	GCA_001633675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/675/GCA_001633675.1_ASM163367v1	-	Nizo2889
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.78026	31.1	-	CUOV01	29	1845	1727	3/31/15	3/18/17	Contig	SC	SAMEA1010436	GCA_001229965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/965/GCA_001229965.1_7065_7_93	-	OXC6442
Burkholderia sp. WP9	1500263	PRJEB16369	349274	Proteobacteria	Betaproteobacteria	9.02353	62.1	-	FNTG01	7	8129	7740	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02787142	GCA_900104795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/795/GCA_900104795.1_IMG-taxon_2687453794_annotated_assembly	-	WP9
Cutibacterium acnes	1747	PRJNA327922	327922	Terrabacteria group	Actinobacteria	2.53589	60.1	-	MAVU01	19	2551	2404	10/3/16	4/5/17	Contig	Nantes University Hospital	SAMN05361919	GCA_001750525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/525/GCA_001750525.1_ASM175052v1	-	NTS_2003_1719
Staphylococcus haemolyticus	1283	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.58705	32.7	-	JVTM01	147	2570	2464	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197308	GCA_001069705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/705/GCA_001069705.1_ASM106970v1	26230489	1328_SHAE
Enterobacter cloacae subsp. cloacae	336306	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.29915	54.7	-	LPOK01	82	5240	5002	12/21/15	3/27/17	Contig	JCVI	SAMN04252950	GCA_001473135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/135/GCA_001473135.1_SMART_1093.v1	-	SMART_1093
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.54585	56.8	-	NEYC01	101	4415	4218	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN04329642	GCA_002198945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/945/GCA_002198945.1_ASM219894v1	-	MOD1-comp53b
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.84732	64.1	-	CSZK01	39	4885	4621	3/24/15	3/18/17	Contig	SC	SAMEA1317707	GCA_001215745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/745/GCA_001215745.1_7520_7_37	-	PAP157
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.52741	67.3	-	LPAA01	100	6779	6448	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449336	GCA_001528175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/175/GCA_001528175.1_ASM152817v1	-	MSMB1565WGS
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.14847	38.8	-	NGCU01	99	4073	3859	5/15/17	5/23/17	Contig	JCVI	SAMN06837780	GCA_002137125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/125/GCA_002137125.1_ASM213712v1	-	PR367
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA271006	271006	Proteobacteria	Gammaproteobacteria	5.09039	55.3	-	JZKY01	89	5014	4781	3/30/15	3/25/17	Contig	JCVI	SAMN03277201	GCA_000965905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/905/GCA_000965905.1_ASM96590v1	-	CIDEIMsCOL14
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.25978	55	-	LVUP01	247	5316	4875	4/25/16	4/6/17	Contig	JCVI	SAMN04572691	GCA_001631815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/815/GCA_001631815.1_ASM163181v1	-	GN04222
Mycobacterium abscessus subsp. bolletii	319705	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.00085	64	-	FVYW01	34	4892	4729	3/10/17	3/18/17	Scaffold	SC	SAMEA2275833	GCA_900141605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/605/GCA_900141605.1_12163_2_72	-	1107
Pseudomonas sp. HMSC060G02	1715198	PRJNA296326	296326	Proteobacteria	Gammaproteobacteria	6.25006	66.5	-	LTQN01	109	5954	5737	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498661	GCA_001836655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/655/GCA_001836655.1_ASM183665v1	-	HMSC060G02
Streptomyces sp. NBRC 110028	1621260	PRJDB3539	298983	Terrabacteria group	Actinobacteria	8.92122	71.5	-	BBUZ01	96	7862	7261	10/15/15	3/12/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00026622	GCA_001417735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/735/GCA_001417735.1_ASM141773v1	26659676	NBRC 110028
Bacillus sp. CMAA 1185	1385719	PRJNA278932	278932	Terrabacteria group	Firmicutes	3.90787	43.6	-	LAKC01	10	4199	3895	4/8/15	4/10/17	Contig	EMBRAPA Environment	SAMN03435316	GCA_000970655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/655/GCA_000970655.1_ASM97065v1	26021916	CMAA 1185
Acinetobacter sp. 1294243	1310756	PRJNA194832	194832	Proteobacteria	Gammaproteobacteria	4.13382	38.8	-	JFXG01	69	4053	3746	3/11/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02415051	GCA_000588015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/015/GCA_000588015.1_ASM58801v1	-	1294243
Sphingomonas sp. IBVSS2	1985172	PRJNA384425	384425	Proteobacteria	Alphaproteobacteria	4.29382	67.8	-	NFUR01	9	4014	3923	5/10/17	5/22/17	Scaffold	University of Oslo	SAMN06840510	GCA_002127225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/225/GCA_002127225.1_ASM212722v1	-	IBVSS2
Clostridium sp. CAG:122	1262773	PRJEB703	206580	Terrabacteria group	Firmicutes	3.07846	36.6	-	CAZY01	175	2570	2543	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138545	GCA_000433155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/155/GCA_000433155.1_MGS122	-	-
Rhodococcus sp. 06-1474-1B	2022499	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.33956	64.6	-	NOYR01	37	5009	4861	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376369	GCA_002258885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/885/GCA_002258885.1_ASM225888v1	-	06-1474-1B
Enterobacter cloacae complex sp. SMART_269	1870949	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.09323	55.5	-	LPQP01	73	4970	4749	12/21/15	4/20/17	Contig	JCVI	SAMN04252892	GCA_001471995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/995/GCA_001471995.1_SMART_269.v1	-	SMART_269
Staphylococcus sp. HMSC055G07	1715103	PRJNA296231	296231	Terrabacteria group	Firmicutes	2.55637	33.6	-	LTRF01	49	2420	2357	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498611	GCA_001836305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/305/GCA_001836305.1_ASM183630v1	-	HMSC055G07
Corynebacterium sp. HMSC034A01	1739295	PRJNA299945	299945	Terrabacteria group	Actinobacteria	2.39383	65.3	-	LTNW01	66	2283	2167	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498677	GCA_001838175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/175/GCA_001838175.1_ASM183817v1	-	HMSC034A01
Streptococcus sp. oral taxon 056 str. F0418	904294	PRJNA53569	53569	Terrabacteria group	Firmicutes	1.94325	39.5	-	AFQU01	1	1970	1745	7/6/11	4/17/17	Contig	J. Craig Venter Institute	SAMN00115115	GCA_000220065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/065/GCA_000220065.2_ASM22006v1	-	F0418
Mycobacterium sp. 852002-51296_SCH5728562-a	1834100	PRJNA305922	305922	Terrabacteria group	Actinobacteria	4.92713	66.9	-	LZIQ01	139	4701	4555	6/17/16	4/12/17	Contig	JCVI	SAMN04692011	GCA_001667065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/065/GCA_001667065.1_ASM166706v1	-	852002-51296_SCH5728562-a
Paenibacillus sp. FJAT-22460	1705565	PRJNA293652	293652	Terrabacteria group	Firmicutes	6.19876	47	-	LIUT01	9	5650	5426	9/1/15	4/11/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04009153	GCA_001277345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/345/GCA_001277345.1_ASM127734v1	-	FJAT-22460
Prochlorococcus sp. scB241_526D20	1471440	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.31893	31.4	-	JFKQ01	288	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671311	GCA_000635275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/275/GCA_000635275.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Rhizobium sp. AC27/96	1841653	PRJNA319063	319063	Proteobacteria	Alphaproteobacteria	7.29035	59.7	-	LXKN01	75	6923	6789	7/22/16	4/13/17	Scaffold	Oregon State University	SAMN04901294	GCA_001692325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/325/GCA_001692325.1_ASM169232v1	27547538	AC27/96
Mesorhizobium sp. SCN 65-12	1660108	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	4.43978	64.9	-	MEEE01	453	4471	3962	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652451	GCA_001724345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/345/GCA_001724345.1_ASM172434v1	26031303	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.79806	57	-	FXSK01	113	5890	5476	4/28/17	5/6/17	Scaffold	SC	SAMEA2609567	GCA_900182195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/182/195/GCA_900182195.1_14936_2_70	-	3189STDY5864923
Staphylococcus argenteus	985002	PRJEB20633	390605	Terrabacteria group	Firmicutes	2.82576	32.3	-	FXVT01	77	2826	2645	6/15/17	7/5/17	Scaffold	Geogentics	SAMEA104034164	GCA_900183815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/815/GCA_900183815.1_H1540	-	-
Staphylococcus argenteus	985002	PRJEB20633	390605	Terrabacteria group	Firmicutes	2.81704	32.3	-	FXWB01	114	2823	2621	6/15/17	7/5/17	Scaffold	Geogentics	SAMEA104034166	GCA_900183825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/825/GCA_900183825.1_H1826	-	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.56129	57.5	-	FXSP01	77	5609	5273	4/28/17	5/6/17	Scaffold	SC	SAMEA2609562	GCA_900182205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/182/205/GCA_900182205.1_14936_2_67	-	3189STDY5864920
Mesorhizobium sp. SCN 65-20	1660109	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	3.67887	64.6	-	MEEF01	136	3642	3479	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652452	GCA_001724355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/355/GCA_001724355.1_ASM172435v1	26031303	-
Rhizobium sp. YK2	1860096	PRJNA324744	324744	Proteobacteria	Alphaproteobacteria	7.16205	59.7	-	LZPI01	69	6858	6582	9/16/16	4/13/17	Scaffold	"Australian Centre for Ecogenomics, The University of Queensland"	SAMN05213933	GCA_001729315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/315/GCA_001729315.1_ASM172931v1	-	YK2
Microbacterium sp. UBA3486	1946947	PRJNA348753	348753	Terrabacteria group	Actinobacteria	3.76801	68.3	-	DFQP01	118	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452295	GCA_002377845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/845/GCA_002377845.1_ASM237784v1	28894102	-
Prochlorococcus sp. scB241_527G5	1471446	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.17083	31.1	-	JFKW01	471	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671317	GCA_000635295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/295/GCA_000635295.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Campylobacter sp. UBA1713	1946149	PRJNA348753	348753	Proteobacteria	delta/epsilon subdivisions	1.70643	43.6	-	DCIZ01	160	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06456277	GCA_002317305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/305/GCA_002317305.1_ASM231730v1	28894102	-
Paenibacillus sp. A59	1705561	PRJNA293552	293552	Terrabacteria group	Firmicutes	7.08729	46.1	-	LITU01	83	6339	5974	9/9/15	4/11/17	Scaffold	INTA	SAMN04005808	GCA_001280595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/595/GCA_001280595.1_ASM128059v1	26494679	A59
Mycobacterium sp. 852014-52450_SCH5900713	1834116	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.42265	67.6	-	LZIL01	80	5111	4928	6/17/16	4/12/17	Contig	JCVI	SAMN04692044	GCA_001667075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/075/GCA_001667075.1_ASM166707v1	-	852014-52450_SCH5900713
Streptococcus sp. SK643	1095727	PRJNA75171	75171	Terrabacteria group	Firmicutes	1.86031	39	-	AJMM01	31	1856	1747	4/23/12	4/7/17	Contig	J. Craig Venter Institute	SAMN00761857	GCA_000259505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/505/GCA_000259505.1_SspSK643v1.0	-	SK643
Corynebacterium sp. HMSC072B09	1739489	PRJNA300139	300139	Terrabacteria group	Actinobacteria	2.48428	58.8	-	LTNU01	64	2181	2093	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498697	GCA_001838205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/205/GCA_001838205.1_ASM183820v1	-	HMSC072B09
Staphylococcus sp. HMSC057B01	1715111	PRJNA296239	296239	Terrabacteria group	Firmicutes	2.72222	32.7	-	LTRB01	67	2843	2690	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498618	GCA_001836385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/385/GCA_001836385.1_ASM183638v1	-	HMSC057B01
Enterobacter cloacae complex sp. SMART_454	1870950	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.27703	55.8	-	LPPZ01	111	5278	5005	12/21/15	4/20/17	Contig	JCVI	SAMN04252909	GCA_001472305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/305/GCA_001472305.1_SMART_454.v1	-	SMART_454
Rhodococcus sp. 06-1059B-a	2022496	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.67791	64.7	-	NOYT01	73	5305	5121	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376366	GCA_002258905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/905/GCA_002258905.1_ASM225890v1	-	06-1059B-a
Clostridium sp. CAG:1219	1262772	PRJEB702	206579	Terrabacteria group	Firmicutes	1.0659	28.1	-	CBAG01	83	1068	1041	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138554	GCA_000433335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/335/GCA_000433335.1_MGS1219	-	-
Acinetobacter sp. 1130196	1310772	PRJNA194848	194848	Proteobacteria	Gammaproteobacteria	4.07482	38.8	-	JFWX01	136	4128	3702	3/11/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02415041	GCA_000588095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/095/GCA_000588095.1_ASM58809v1	-	1130196
Bacillus sp. UMTAT18	1565146	PRJNA265014	265014	Terrabacteria group	Firmicutes	5.47937	35.2	-	JSFD01	69	5886	5547	4/10/15	4/10/17	Contig	Monash University Malaysia	SAMN03145045	GCA_000971535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/535/GCA_000971535.1_ASM97153v1	-	UMTAT18
Streptomyces sp. TP-A0356	1359208	PRJDB4098	299481	Terrabacteria group	Actinobacteria	8.40936	70.9	-	BBZJ01	62	7645	7112	10/22/15	3/13/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00035865	GCA_001417775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/775/GCA_001417775.1_ASM141777v1	26659684	TP-A0356
Pseudomonas sp. HMSC061A10	1715062	PRJNA296190	296190	Proteobacteria	Gammaproteobacteria	6.26984	66.5	-	LTQM01	85	5992	5772	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498589	GCA_001836665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/665/GCA_001836665.1_ASM183666v1	-	HMSC061A10
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.229	54.9	-	LVVB01	78	5167	4907	4/25/16	4/6/17	Contig	JCVI	SAMN04572702	GCA_001631845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/845/GCA_001631845.1_ASM163184v1	-	GN06255
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA271006	271006	Proteobacteria	Gammaproteobacteria	5.13844	55.2	-	JZLA01	140	5077	4814	3/30/15	3/26/17	Contig	JCVI	SAMN03277203	GCA_000965925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/925/GCA_000965925.1_ASM96592v1	-	CIDEIMsCOL16
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.00846	38.7	-	NGCV01	48	3881	3719	5/15/17	5/23/17	Contig	JCVI	SAMN06837779	GCA_002137145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/145/GCA_002137145.1_ASM213714v1	-	PR368
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.27096	67.4	-	LPAF01	141	6622	6261	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449342	GCA_001528205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/205/GCA_001528205.1_ASM152820v1	-	MSMB1591WGS
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16022	64.1	-	CSZQ01	14	5271	4889	3/24/15	3/18/17	Contig	SC	SAMEA1317691	GCA_001216525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/525/GCA_001216525.1_7520_7_44	-	PAP164
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.60312	56.7	-	NEYG01	126	4577	4316	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN04329638	GCA_002198975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/975/GCA_002198975.1_ASM219897v1	-	MOD1-GK1026
Enterobacter cloacae subsp. cloacae	336306	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.53918	54.3	-	LPOJ01	153	5506	5226	12/21/15	3/27/17	Contig	JCVI	SAMN04252951	GCA_001473155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/155/GCA_001473155.1_SMART_1094.v1	-	SMART_1094
Staphylococcus haemolyticus	1283	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.59602	32.8	-	JVVE01	124	2559	2466	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197264	GCA_001070475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/475/GCA_001070475.1_ASM107047v1	26230489	1292_SHAE
Cutibacterium acnes	1747	PRJNA327856	327856	Terrabacteria group	Actinobacteria	2.53463	60	-	MAUX01	32	2559	2413	10/3/16	4/5/17	Contig	Nantes University Hospital	SAMN05360247	GCA_001750535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/535/GCA_001750535.1_ASM175053v1	-	LRY_BL
Burkholderia sp. GAS332	1882750	PRJEB18400	355835	Proteobacteria	Betaproteobacteria	10.4165	61.4	-	FSRV01	3	9222	8882	12/14/16	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444172	GCA_900142905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/905/GCA_900142905.1_IMG-taxon_2695420918_annotated_assembly	-	GAS332
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.78077	31.1	-	CUOW01	29	1845	1722	3/31/15	3/18/17	Contig	SC	SAMEA1010535	GCA_001230745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/745/GCA_001230745.1_7065_7_94	-	OXC6443
Lactobacillus plantarum	1590	PRJNA314111	314111	Terrabacteria group	Firmicutes	3.26743	44.4	-	LUXH01	154	3252	2914	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04528909	GCA_001633685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/685/GCA_001633685.1_ASM163368v1	-	Nizo3400
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.11343	59.8	-	JVNC01	55	4864	4742	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197474	GCA_001063145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/145/GCA_001063145.1_ASM106314v1	26230489	280_SMAR
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.45183	46.9	-	CQAU01	119	4190	3925	3/23/15	3/26/17	Scaffold	SC	SAMEA980131	GCA_001149865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/865/GCA_001149865.1_4976_6_10	-	ERL08109
Corynebacterium diphtheriae bv. mitis	1806053	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.44916	53.6	-	LSWG01	85	2369	2182	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496978	GCA_002202605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/605/GCA_002202605.1_S52	-	2929
Staphylococcus aureus 08BA02176	1229492	PRJNA174226	174226	Terrabacteria group	Firmicutes	2.78231	32.9	chromosome:NC_018608.1/CP003808.1	-	1	2858	2671	9/14/12	3/2/17	Complete Genome	Public Health Agency of Canada	SAMN02603722	GCA_000296595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/595/GCA_000296595.1_ASM29659v1	23144384	08BA02176
Brucella melitensis CNGB 1120	1198680	PRJNA176520	176520	Proteobacteria	Alphaproteobacteria	3.29245	57.2	-	AQNF01	4	3376	3148	4/16/13	4/1/17	Contig	Broad Institute	SAMN01047731	GCA_000366885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/885/GCA_000366885.1_Bruc_meli_CNGB_1120_V1	-	CNGB 1120
Lactobacillus rhamnosus	47715	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.04514	46.7	-	JVQV01	96	3096	2842	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197377	GCA_001062885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/885/GCA_001062885.1_ASM106288v1	26230489	186_LRHA
Pasteurella multocida subsp. multocida	44283	PRJNA355236	355236	Proteobacteria	Gammaproteobacteria	2.40085	40.2	-	MTEC01	30	2332	2212	3/8/17	3/11/17	Scaffold	INRA	SAMN06140941	GCA_002023805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/805/GCA_002023805.1_ASM202380v1	-	CIRMBP-0760
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15801	41.1	-	CWAB01	80	2101	1913	6/23/15	3/26/17	Contig	SC	SAMEA1032869	GCA_001176905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/905/GCA_001176905.1_6903_2_6	-	EQUI0055
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.03766	66.2	-	JVTB01	205	4707	4527	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197319	GCA_001069715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/715/GCA_001069715.1_ASM106971v1	26230489	1338_SMAL
Enterococcus faecium EnGen0002	1138890	PRJNA82431	82431	Terrabacteria group	Firmicutes	3.28358	38.3	-	AHWR01	25	3305	3078	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779802	GCA_000321665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/665/GCA_000321665.1_Ente_faec_E1133_V1	-	E1133
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14435	52.4	-	CQLF01	69	2521	2197	3/23/15	4/11/17	Contig	SC	SAMEA1690321	GCA_001102165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/165/GCA_001102165.1_8727_8_75	-	GCGS171
Streptococcus mutans SF14	857120	PRJNA49823	49823	Terrabacteria group	Firmicutes	1.94479	36.8	-	AHSQ01	97	1923	1830	2/11/13	3/23/17	Contig	Cornell University	SAMN02429031	GCA_000339435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/435/GCA_000339435.1_ASM33943v1	23228887	SF14
Enterococcus faecalis EnGen0080	1151199	PRJNA85649	85649	Terrabacteria group	Firmicutes	3.07348	37.2	-	AIIX01	19	3140	2987	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00792304	GCA_000390765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/765/GCA_000390765.1_Ente_faec_7330112-3_V1	-	7330112-3
Clostridium botulinum	1491	PRJNA257008	257008	Terrabacteria group	Firmicutes	3.90762	28	-	LGIK01	56	3804	3625	8/21/15	3/26/17	Contig	µFORGE	SAMN03787462	GCA_001273255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/255/GCA_001273255.1_CBOT006-SEQ-1-ASM-1	-	ATCC 17862
Staphylococcus aureus subsp. aureus M013	1118959	PRJNA78007	78007	Terrabacteria group	Firmicutes	2.78864	32.9	chromosome:NC_016928.1/CP003166.1	-	1	2877	2642	12/12/11	3/2/17	Complete Genome	National Health Research Institutes	SAMN02603643	GCA_000237125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/125/GCA_000237125.1_ASM23712v1	22328755	M013
Bacillus subtilis	1423	PRJEB9876	290051	Terrabacteria group	Firmicutes	4.11677	43.8	-	CYHO01	211	4177	3980	8/27/15	3/26/17	Contig	University of Liverpool	SAMEA3484406	GCA_001286765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/765/GCA_001286765.1_Bacillus_JRS7	-	-
Vibrio parahaemolyticus NIHCB0757	1238215	PRJNA176650	176650	Proteobacteria	Gammaproteobacteria	5.26246	45.3	-	AVPX01	4	5034	4775	8/23/13	3/24/17	Contig	IGS	SAMN02189720	GCA_000477475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/475/GCA_000477475.1_ASM47747v1	-	NIHCB0757
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.87529	38	-	MLLX01	163	1931	1722	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297037	GCA_001868275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/275/GCA_001868275.1_ASM186827v1	27118061	AWRIB316
Xanthomonas oryzae pv. oryzae	64187	PRJNA269456	269456	Proteobacteria	Gammaproteobacteria	4.28063	63.9	-	JXGA01	410	4306	3422	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252555	GCA_001928665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/665/GCA_001928665.1_ASM192866v1	-	IXO189
Xanthomonas citri pv. glycines	473421	PRJNA298608	298608	Proteobacteria	Gammaproteobacteria	5.23157	64.6	-	LOKO01	142	4752	4357	3/6/17	3/9/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN04145201	GCA_002019125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/125/GCA_002019125.1_ASM201912v1	-	LMG712
Brucella abortus F2/06-8	1160192	PRJNA173614	173614	Proteobacteria	Alphaproteobacteria	3.28447	57.2	-	AQME01	4	3379	3154	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811174	GCA_000365605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/605/GCA_000365605.1_Bruc_abor_F2_06-8_V1	-	F2/06-8
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.79669	32.3	-	MRLF01	100	1862	1548	4/19/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773730	GCA_002100335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/335/GCA_002100335.1_ASM210033v1	28348839	F0777
Clostridioides difficile CD166	1151294	PRJNA85761	85761	Terrabacteria group	Firmicutes	4.28937	28.2	-	AVHY01	56	4016	3862	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766593	GCA_000449465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/465/GCA_000449465.2_ASM44946v2	-	CD166
Vibrio cholerae HC-17A2	1000952	PRJNA64673	64673	Proteobacteria	Gammaproteobacteria	4.02348	47.5	-	AJSI01	94	3812	3673	10/15/12	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00752543	GCA_000305675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/675/GCA_000305675.2_ASM30567v2	-	HC-17A2
Bacillus thuringiensis serovar sooncheon	180891	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.75616	35.1	-	NFCY01	33	6222	5816	5/17/17	6/15/17	Contig	Huazhong Agricultural University	SAMN05934514	GCA_002147025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/025/GCA_002147025.1_ASM214702v1	-	BGSC 4BB1
Chlamydia trachomatis	813	PRJNA362456	362456	PVC group	Chlamydiae	1.04025	41.3	chromosome:NZ_CP019385.1/CP019385.1	-	1	968	895	6/13/17	6/15/17	Chromosome	University of Kansas	SAMN06239528	GCA_002192565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/565/GCA_002192565.1_ASM219256v1	28347402	434Bu
Burkholderia pseudomallei	28450	PRJNA244400	244400	Proteobacteria	Betaproteobacteria	7.32094	67.9	-	JPNR01	2	7696	6932	9/23/14	4/10/17	Scaffold	Los Alamos National Laboratory	SAMN02849566	GCA_000756985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/985/GCA_000756985.1_BEF	25414490	BEF
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.82904	66.3	-	MUTC01	186	8421	8004	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001900	GCA_001992315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/315/GCA_001992315.1_ASM199231v1	-	VC7530
Bacteroides fragilis	817	PRJNA288885	288885	FCB group	Bacteroidetes/Chlorobi group	4.89643	43.4989	plasmid pBI143:NZ_CM004522.1/CM004522.1	LIDU01	68	4294	4073	8/4/16	4/5/17	Contig	NIH/ NIDDK	SAMN03839335	GCA_001699875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/875/GCA_001699875.1_ASM169987v1	27348220	20656-2-1
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.69083	50.8	-	NQCC01	84	4861	4509	8/11/17	8/15/17	Contig	JCVI	SAMN07450626	GCA_002247805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/805/GCA_002247805.1_ASM224780v1	-	ECSW+13
Legionella pneumophila	446	PRJNA281163	281163	Proteobacteria	Gammaproteobacteria	3.4078	38.2	-	LBAH01	40	3118	2989	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03483451	GCA_001582545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/545/GCA_001582545.1_ASM158254v1	26888563	ATCC 33155
Pseudomonas syringae	317	PRJNA287868	287868	Proteobacteria	Gammaproteobacteria	6.36114	58.8	-	LFQK01	131	5848	5627	8/5/15	3/26/17	Contig	University of Malaya	SAMN03793179	GCA_001238485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/485/GCA_001238485.1_ASM123848v1	-	Riq4
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.33133	41.3	-	CEDT01	392	2264	2094	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233894	GCA_000877015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/015/GCA_000877015.1_Velvet_assembly	-	LS1J
Streptococcus agalactiae CCUG 19094	1154807	PRJNA86209	86209	Terrabacteria group	Firmicutes	2.17804	35.3	-	ALQK01	52	2240	2113	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991067	GCA_000288675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/675/GCA_000288675.1_ASM28867v1	-	CCUG 19094
Acinetobacter baumannii NIPH 67	1217627	PRJNA183255	183255	Proteobacteria	Gammaproteobacteria	4.05075	38.9	-	APRA01	5	3773	3610	4/16/13	3/15/17	Scaffold	Broad Institute	SAMN01828146	GCA_000369265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/265/GCA_000369265.1_Acin_baum_NIPH_67_V1	-	NIPH 67
Pseudomonas aeruginosa LESlike7	1408277	PRJNA222523	222523	Proteobacteria	Gammaproteobacteria	6.46791	66.5	chromosome:NZ_CP006981.1/CP006981.1	-	1	6133	5961	3/3/14	3/16/17	Chromosome	"IBIS, University Laval"	SAMN03081516	GCA_000583915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/915/GCA_000583915.1_ASM58391v1	-	LESlike7
Shigella flexneri Shi06AH116	1434130	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.44422	50.4	-	AZOI01	322	4888	4237	1/29/14	2/22/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437365	GCA_000565545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/545/GCA_000565545.1_ASM56554v1	24452172	Shi06AH116
Bacillus anthracis	1392	PRJNA257008	257008	Terrabacteria group	Firmicutes	5.45803	35.1	-	LHUO01	28	6128	5725	8/31/15	3/26/17	Contig	µFORGE	SAMN03862112	GCA_001276995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/995/GCA_001276995.1_BANT015-SEQ-1-ASM-1	-	A0389
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2750	1291331	PRJNA188997	188997	Spirochaetes	Spirochaetia	4.61092	35	-	AOVT01	154	4123	3742	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920618	GCA_000343615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/615/GCA_000343615.1_CA_glsol103	-	Fiocruz LV2750
Streptococcus pyogenes ABC020049250	1439188	PRJNA233177	233177	Terrabacteria group	Firmicutes	1.83005	38.5	-	JJGN01	2	1878	1755	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567526	GCA_000630405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/405/GCA_000630405.1_Stre_pyog_ABC020049250_V1	-	ABC020049250
Neisseria meningitidis	487	PRJNA244809	244809	Proteobacteria	Betaproteobacteria	2.0924	51.8	-	JMCR01	81	2426	2070	7/20/15	3/21/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02729091	GCA_001183325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/325/GCA_001183325.1_Nm420718	25989189	420718
Helicobacter pylori	210	PRJDB4296	362565	Proteobacteria	delta/epsilon subdivisions	1.57027	38.9	chromosome:AP017338.1	-	1	1549	1512	1/18/17	1/18/17	Chromosome	"Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture"	SAMD00042471	GCA_002357615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/615/GCA_002357615.1_ASM235761v1	-	F24
Streptococcus pneumoniae SPN1041	869310	PRJNA50807	50807	Terrabacteria group	Firmicutes	2.09734	39.7	-	CACE01	52	2354	2071	7/30/10	3/8/17	Contig	Wellcome Trust Sanger Institute	SAMEA3138304	GCA_000180475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/180/475/GCA_000180475.1_ASM18047v1	-	SPN1041
Methanococcus maripaludis X1	1053692	PRJNA68579	68579	Euryarchaeota	Methanococci	1.7467	32.9	chromosome:NC_015847.1/CP002913.1	-	1	1873	1797	7/14/11	4/7/17	Complete Genome	Petroleum reservoir formation water	SAMN02603718	GCA_000220645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/645/GCA_000220645.1_ASM22064v1	21914896	X1
Mycobacterium tuberculosis TRS29	1334075	PRJNA203187	203187	Terrabacteria group	Actinobacteria	4.41153	65.5	chromosome:NZ_CP009187.1/CP009187.1	-	1	4272	4090	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837649	GCA_002000945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/945/GCA_002000945.1_ASM200094v1	27261264	TRS29
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.83974	38	-	FFID01	18	1817	1661	2/9/16	3/27/17	Scaffold	SC	SAMEA2674722	GCA_900022485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/485/GCA_900022485.1_14412_4_12	-	2842STDY5882040
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.33507	69	-	BDNR01	376	5101	4714	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076669	GCA_002089555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/555/GCA_002089555.1_ASM208955v1	28045086	IH-801
Bacillus cereus HuA2-4	1053203	PRJNA70371	70371	Terrabacteria group	Firmicutes	5.72204	35.5	-	AHDX01	7	5973	5597	8/15/12	5/18/17	Scaffold	Broad Institute	SAMN02596835	GCA_000291175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/175/GCA_000291175.1_Baci_cere_HuA2-4_V1	-	HuA2-4
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.51276	31.8	-	JWFU01	140	2470	2386	7/10/15	3/26/17	Contig	University of Washington	SAMN03196988	GCA_001069955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/955/GCA_001069955.1_ASM106995v1	26230489	1024_SEPI
Francisella sp. TX077308	573569	PRJNA67139	67139	Proteobacteria	Gammaproteobacteria	2.03593	32.9	chromosome:NC_015696.1/CP002872.1	-	1	1987	1884	6/20/11	4/17/17	Complete Genome	Los Alamos National Laboratory	SAMN02603541	GCA_000219045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/045/GCA_000219045.1_ASM21904v1	-	TX077308
Pseudomonas fluorescens	294	PRJNA262727	262727	Proteobacteria	Gammaproteobacteria	7.13981	59.5	-	LCYC01	103	6679	6268	1/29/16	4/4/17	Scaffold	University of Padova	SAMN03085516	GCA_001542725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/725/GCA_001542725.1_ASM154272v1	-	Ps_40
Yersinia pestis biovar Orientalis str. AS200901156	1084228	PRJNA73101	73101	Proteobacteria	Gammaproteobacteria	4.57831	47.5	-	AGJU01	220	4324	4108	3/22/12	5/19/17	Contig	US Army Edgewood Chemical Biological Center	SAMN01831179	GCA_000255775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/775/GCA_000255775.1_ASM25577v1	22359605	AS200901156
Staphylococcus aureus subsp. aureus str. JKD6008	546342	PRJNA29567	29567	Terrabacteria group	Firmicutes	2.92434	32.9	chromosome:NC_017341.1/CP002120.1	-	1	3114	2903	8/13/10	3/2/17	Complete Genome	Monash University	SAMN02603619	GCA_000145595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/595/GCA_000145595.1_ASM14559v1	20802046	JKD6008
Staphylococcus aureus subsp. aureus ED133	685039	PRJNA41277	41277	Terrabacteria group	Firmicutes	2.83248	32.9	chromosome:NC_017337.1/CP001996.1	-	1	2962	2770	6/21/10	3/2/17	Complete Genome	University of Edinburgh	SAMN02604166	GCA_000210315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/315/GCA_000210315.1_ASM21031v1	20624747	ED133
Staphylococcus aureus 04-02981	703339	PRJNA34809	34809	Terrabacteria group	Firmicutes	2.82145	32.9	chromosome:NC_017340.1/CP001844.2	-	1	2932	2776	2/3/10	3/22/17	Complete Genome	Robert Koch Institut	SAMN02603764	GCA_000025145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/145/GCA_000025145.2_ASM2514v1	20386717	04-02981
Staphylococcus aureus subsp. aureus Mu3	418127	PRJDA18509	18509	Terrabacteria group	Firmicutes	2.88017	32.9	chromosome:NC_009782.1/AP009324.1	-	1	3007	2842	9/4/07	3/2/17	Complete Genome	Juntendo Universit	SAMD00060910	GCA_000010445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/445/GCA_000010445.1_ASM1044v1	"940,051,217,954,695"	Mu3
Staphylococcus aureus subsp. aureus str. Newman	426430	PRJDA18801	18801	Terrabacteria group	Firmicutes	2.8789	32.9	chromosome:NC_009641.1/AP009351.1	-	1	3065	2919	7/3/07	3/2/17	Complete Genome	"Juntendo University School of Medicine, Department of Bacteriology"	SAMD00060913	GCA_000010465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/465/GCA_000010465.1_ASM1046v1	17951380	Newman
Staphylococcus aureus subsp. aureus NCTC 8325	93061	PRJNA237	237	Terrabacteria group	Firmicutes	2.82136	32.9	chromosome:NC_007795.1/CP000253.1	-	1	2872	2767	2/13/06	8/3/16	Complete Genome	University of Oklahoma Health Sciences Center	SAMN02604235	GCA_000013425.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/425/GCA_000013425.1_ASM1342v1	-	NCTC 8325
Yersinia pestis biovar Orientalis str. BA200901703	1084229	PRJNA73103	73103	Proteobacteria	Gammaproteobacteria	4.56018	47.5	-	AGJV01	282	4325	4025	3/22/12	5/19/17	Contig	US Army Edgewood Chemical Biological Center	SAMN01831183	GCA_000255795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/795/GCA_000255795.1_ASM25579v1	22359605	BA200901703
Pseudomonas fluorescens	294	PRJNA315402	315402	Proteobacteria	Gammaproteobacteria	6.54716	59.5	-	LVEJ01	64	5898	5738	5/19/16	4/5/17	Scaffold	Leibniz Institute for Natural Product Research and Infection Biology	SAMN04558174	GCA_001648775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/775/GCA_001648775.1_ASM164877v1	-	HKI0770
Staphylococcus aureus	1280	PRJNA317948	317948	Terrabacteria group	Firmicutes	2.79346	32.8988	chromosome:NZ_CP015173.1/CP015173.1; plasmid pRIVM6519-1:NZ_CP015174.1/CP015174.1; plasmid pRIVM6519-2:NZ_CP015175.1/CP015175.1	-	3	2888	2752	4/11/16	3/6/17	Complete Genome	RIVM	SAMN04590098	GCA_001618305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/305/GCA_001618305.1_ASM161830v1	-	RIVM6519
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.48753	32	-	JWFQ01	143	2453	2369	7/10/15	3/26/17	Contig	University of Washington	SAMN03196992	GCA_001069965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/965/GCA_001069965.1_ASM106996v1	26230489	1028_SEPI
Bacillus cereus MSX-A1	1053220	PRJNA70407	70407	Terrabacteria group	Firmicutes	6.0667	35.1	-	AHEO01	9	6413	5879	8/15/12	5/18/17	Scaffold	Broad Institute	SAMN02596852	GCA_000291195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/195/GCA_000291195.1_Baci_cere_MSX-A1_V1	-	MSX-A1
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.08972	69.1	-	BDNS01	510	4904	4505	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076670	GCA_002089575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/575/GCA_002089575.1_ASM208957v1	28045086	IH-945
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.86936	38	-	FFIQ01	28	1903	1755	2/9/16	3/27/17	Scaffold	SC	SAMEA2674782	GCA_900022495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/495/GCA_900022495.1_14412_4_57	-	2842STDY5882085
Mycobacterium tuberculosis TRS22	1334068	PRJNA203180	203180	Terrabacteria group	Actinobacteria	4.41153	65.3	chromosome:NZ_CP009183.1/CP009183.1	-	1	4321	4062	2/13/17	3/15/17	Chromosome	Vanderbilt University	SAMN02837642	GCA_002000965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/965/GCA_002000965.1_ASM200096v1	27261264	TRS22
Staphylococcus aureus subsp. aureus	46170	PRJNA286121	286121	Terrabacteria group	Firmicutes	3.00124	32.8971	chromosome:NZ_CP012013.1/CP012013.1; plasmid pBe62:NZ_CP012014.1/CP012014.1	-	2	3174	2972	1/15/16	3/5/17	Complete Genome	LNCC	SAMN03765155	GCA_001515685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/685/GCA_001515685.1_ASM151568v1	-	Be62
Streptococcus pneumoniae SPN7465	869313	PRJNA50813	50813	Terrabacteria group	Firmicutes	2.08494	39.7	-	CACF01	26	2300	2035	7/30/10	3/8/17	Contig	Wellcome Trust Sanger Institute	SAMEA3138305	GCA_000180495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/180/495/GCA_000180495.1_ASM18049v1	-	SPN7465
Helicobacter pylori	210	PRJDB4296	362565	Proteobacteria	delta/epsilon subdivisions	1.62315	38.7	chromosome:AP017345.1	-	1	1620	1585	1/18/17	1/18/17	Chromosome	"Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture"	SAMD00042475	GCA_002357635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/635/GCA_002357635.1_ASM235763v1	-	F55
Neisseria meningitidis	487	PRJNA244810	244810	Proteobacteria	Betaproteobacteria	2.15403	51.5	-	JMCS01	86	2508	2135	7/20/15	3/21/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02729092	GCA_001183335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/335/GCA_001183335.1_Nm100601	25989189	100601
Streptococcus pyogenes ABC020048543	1439183	PRJNA233174	233174	Terrabacteria group	Firmicutes	1.75452	38.5	-	JJGO01	7	1764	1630	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567523	GCA_000630425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/425/GCA_000630425.1_Stre_pyog_ABC020048543_V1	-	ABC020048543
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2766	1291332	PRJNA188998	188998	Spirochaetes	Spirochaetia	4.62484	35	-	AOVS01	146	4136	3773	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920604	GCA_000343635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/635/GCA_000343635.1_CA_glsol108	-	Fiocruz LV2766
Bacillus anthracis	1392	PRJNA257008	257008	Terrabacteria group	Firmicutes	5.45487	35.1	-	LHUN01	32	6124	5725	8/31/15	3/26/17	Contig	µFORGE	SAMN03862113	GCA_001277085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/085/GCA_001277085.1_BANT016-SEQ-1-ASM-1	-	A0021
Shigella flexneri Shi06GS07	1434131	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.50524	50.5	-	AZOJ01	293	5001	4326	1/29/14	2/22/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437366	GCA_000565565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/565/GCA_000565565.1_ASM56556v1	24452172	Shi06GS07
Pseudomonas aeruginosa LES400	1408271	PRJNA222517	222517	Proteobacteria	Gammaproteobacteria	6.59112	66.3	chromosome:NZ_CP006982.1/CP006982.1	-	1	6291	6090	3/3/14	3/16/17	Chromosome	"IBIS, University Laval"	SAMN03081517	GCA_000583935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/935/GCA_000583935.1_ASM58393v1	-	LES400
Acinetobacter baumannii NIPH 528	1217636	PRJNA183254	183254	Proteobacteria	Gammaproteobacteria	3.87896	39.2	-	APRB01	7	3678	3535	4/16/13	3/15/17	Scaffold	Broad Institute	SAMN01828145	GCA_000369285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/285/GCA_000369285.1_Acin_baum_NIPH_528_V1	-	NIPH 528
Streptococcus agalactiae CCUG 24810	1154808	PRJNA86211	86211	Terrabacteria group	Firmicutes	2.1622	35.4	-	ALQL01	40	2225	2099	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991059	GCA_000288695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/695/GCA_000288695.1_ASM28869v1	-	CCUG 24810
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04974	41.1	-	CEFH01	70	2048	1947	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233918	GCA_000877035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/035/GCA_000877035.1_Velvet_assembly	-	LS4F
Pseudomonas syringae pv. aceris	199198	PRJNA284850	284850	Proteobacteria	Gammaproteobacteria	6.2852	59.2	-	LGAR01	196	5722	5367	8/19/15	3/26/17	Contig	University of Toronto	SAMN03737347	GCA_001270465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/465/GCA_001270465.1_PacA10853	-	A10853
Legionella pneumophila	446	PRJNA281159	281159	Proteobacteria	Gammaproteobacteria	3.42739	38.2	-	LBAG01	42	3152	3019	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03483428	GCA_001582555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/555/GCA_001582555.1_ASM158255v1	26888563	TL-12
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.88729	50.8	-	NQCO01	132	5151	4711	8/11/17	8/15/17	Contig	JCVI	SAMN07450614	GCA_002247905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/905/GCA_002247905.1_ASM224790v1	-	ECCTRSRTH05
Bacteroides fragilis	817	PRJNA288885	288885	FCB group	Bacteroidetes/Chlorobi group	5.25821	43.3	-	LIDS01	156	4690	4432	8/4/16	4/5/17	Contig	NIH/ NIDDK	SAMN03839336	GCA_001699885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/885/GCA_001699885.1_ASM169988v1	27348220	86-5443-2-2
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.44157	66.6	-	MUTE01	119	7978	7620	2/10/17	4/2/17	Contig	University of British Columbia	SAMN05001904	GCA_001992335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/335/GCA_001992335.1_ASM199233v1	-	VC10394
Burkholderia pseudomallei	28450	PRJNA244247	244247	Proteobacteria	Betaproteobacteria	7.27609	68.1	-	JPNU01	3	7502	6863	9/23/14	4/10/17	Scaffold	Los Alamos National Laboratory	SAMN02850989	GCA_000757055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/055/GCA_000757055.1_BDI	25414490	BDI
Chlamydia trachomatis	813	PRJNA362456	362456	PVC group	Chlamydiae	1.03883	41.3	chromosome:NZ_CP019386.1/CP019386.1	-	1	965	893	6/13/17	6/15/17	Chromosome	University of Kansas	SAMN06239804	GCA_002192615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/615/GCA_002192615.1_ASM219261v1	28347402	434Bu
Bacillus thuringiensis serovar londrina	180846	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.07287	34.7	-	NFDA01	84	6365	5948	5/17/17	6/16/17	Contig	Huazhong Agricultural University	SAMN05934516	GCA_002147055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/055/GCA_002147055.1_ASM214705v1	-	BGSC 4BF1
Vibrio cholerae HC-69A1	992008	PRJNA64023	64023	Proteobacteria	Gammaproteobacteria	4.02418	47.5	-	AJSP01	93	3814	3670	10/15/12	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00752540	GCA_000305695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/695/GCA_000305695.2_ASM30569v2	-	HC-69A1
Clostridioides difficile CD169	1151295	PRJNA85763	85763	Terrabacteria group	Firmicutes	4.00912	28.5	-	AVHZ01	51	3723	3566	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766594	GCA_000449485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/485/GCA_000449485.2_ASM44948v2	-	CD169
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.80448	32.2	-	MRKU01	98	1900	1555	4/19/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773858	GCA_002100405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/405/GCA_002100405.1_ASM210040v1	28348839	FDC310
Brucella abortus LEVI237	1160204	PRJNA173626	173626	Proteobacteria	Alphaproteobacteria	3.2628	57.2	-	AQMJ01	4	3350	3121	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811185	GCA_000365625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/625/GCA_000365625.1_Bruc_abor_LEVI237_V1	-	LEVI237
Xanthomonas citri subsp. malvacearum	86040	PRJNA298617	298617	Proteobacteria	Gammaproteobacteria	5.13569	64.5	-	LOKM01	223	4664	4145	3/6/17	3/9/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN04145210	GCA_002019255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/255/GCA_002019255.1_ASM201925v1	-	LMG761
Xanthomonas oryzae pv. oryzae	64187	PRJNA269453	269453	Proteobacteria	Gammaproteobacteria	4.34613	63.9	-	JXFX01	432	4380	3523	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252575	GCA_001928675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/675/GCA_001928675.1_ASM192867v1	-	IXO141
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.87982	37.8	-	MLLY01	261	1982	1702	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297038	GCA_001868285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/285/GCA_001868285.1_ASM186828v1	27118061	AWRIB322
Vibrio parahaemolyticus S174	1394706	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.01315	45.3	-	AWHG01	421	4761	4590	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02339020	GCA_000489015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/015/GCA_000489015.1_S174	-	S174
Bacillus subtilis	1423	PRJEB9876	290051	Terrabacteria group	Firmicutes	4.06071	43.6	-	CYHJ01	114	4177	4019	8/27/15	3/26/17	Contig	University of Liverpool	SAMEA3484401	GCA_001286845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/845/GCA_001286845.1_Bacillus_JRS2	-	-
Staphylococcus aureus subsp. aureus	46170	PRJNA288680	288680	Terrabacteria group	Firmicutes	2.99003	32.8967	chromosome:NZ_CP012015.1/CP012015.1; plasmid pGv51:NZ_CP012016.1/CP012016.1	-	2	3169	2949	1/15/16	3/5/17	Complete Genome	LNCC	SAMN03835466	GCA_001515665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/665/GCA_001515665.1_ASM151566v1	-	Gv51
Clostridium botulinum	1491	PRJNA257008	257008	Terrabacteria group	Firmicutes	3.90943	28	-	LGIL01	35	3753	3535	8/21/15	3/26/17	Contig	µFORGE	SAMN03787463	GCA_001273275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/275/GCA_001273275.1_CBOT007-SEQ-1-ASM-1	-	ATCC 7949
Enterococcus faecalis EnGen0079	1151200	PRJNA85651	85651	Terrabacteria group	Firmicutes	3.08757	37.4	-	AIIY01	14	3191	3009	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00792305	GCA_000390785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/785/GCA_000390785.1_Ente_faec_7330245-2_V1	-	7330245-2
Streptococcus mutans SM6	857119	PRJNA49825	49825	Terrabacteria group	Firmicutes	1.96047	36.8	-	AHSR01	112	1931	1847	2/11/13	3/23/17	Contig	Cornell University	SAMN02429032	GCA_000339455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/455/GCA_000339455.1_ASM33945v1	23228887	SM6
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14061	52.4	-	CQMU01	90	2502	2177	3/23/15	4/11/17	Contig	SC	SAMEA1690351	GCA_001103045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/045/GCA_001103045.1_8289_2_43	-	GCGS043
Enterococcus faecium EnGen0011	1138891	PRJNA82433	82433	Terrabacteria group	Firmicutes	2.82502	38.2	-	AHWS01	11	2879	2610	12/17/12	4/10/17	Scaffold	Broad Institute	SAMN00779803	GCA_000321685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/685/GCA_000321685.1_Ente_faec_E1185_V1	-	E1185
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.97195	66.2	-	JVTA01	461	4722	4430	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197320	GCA_001069755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/755/GCA_001069755.1_ASM106975v1	26230489	1339_SMAL
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.11707	41.2	-	CWAT01	75	2040	1870	6/23/15	3/26/17	Contig	SC	SAMEA1032872	GCA_001176945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/945/GCA_001176945.1_6903_3_46	-	EQUI0095
Pasteurella multocida subsp. multocida	44283	PRJNA355236	355236	Proteobacteria	Gammaproteobacteria	2.4078	40.2	-	MTEB01	29	2339	2229	3/8/17	3/11/17	Scaffold	INRA	SAMN06140940	GCA_002023825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/825/GCA_002023825.1_ASM202382v1	-	CIRMBP-0758
Lactobacillus rhamnosus	47715	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.96219	46.6	-	JVPR01	268	2937	2728	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197407	GCA_001062955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/955/GCA_001062955.1_ASM106295v1	26230489	214_LRHA
Brucella melitensis CNGB 290	1198681	PRJNA176521	176521	Proteobacteria	Alphaproteobacteria	3.29098	57.2	-	AQNG01	9	3372	3142	4/16/13	4/1/17	Contig	Broad Institute	SAMN01047732	GCA_000366905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/905/GCA_000366905.1_Bruc_meli_CNGB_290_V1	-	CNGB 290
Staphylococcus aureus subsp. aureus	46170	PRJNA288682	288682	Terrabacteria group	Firmicutes	2.99092	32.8966	chromosome:NZ_CP012018.1/CP012018.1; plasmid pGv88:NZ_CP012017.1/CP012017.1	-	2	3169	2972	1/15/16	3/5/17	Complete Genome	LNCC	SAMN03835488	GCA_001515705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/705/GCA_001515705.1_ASM151570v1	-	Gv88
Corynebacterium diphtheriae bv. belfanti	2014537	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.46627	53.6	-	LSWH01	62	2400	2208	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496979	GCA_002202655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/655/GCA_002202655.1_S53	-	2937
Yersinia enterocolitica	630	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	4.72267	46.8	-	CPXJ01	169	4577	4095	3/22/15	3/26/17	Scaffold	SC	SAMEA1486345	GCA_001150565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/565/GCA_001150565.1_8016_2_83	-	IP05342
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.12046	59.8	-	JVMW01	49	4879	4749	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197480	GCA_001063175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/175/GCA_001063175.1_ASM106317v1	26230489	286_SMAR
Lactobacillus plantarum	1590	PRJNA314114	314114	Terrabacteria group	Firmicutes	3.29608	44.5	-	LUXK01	52	3188	3032	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04528934	GCA_001633725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/725/GCA_001633725.1_ASM163372v1	-	Nizo3894
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.72924	31.1	-	CUJD01	22	1805	1704	3/31/15	3/18/17	Contig	SC	SAMEA1010590	GCA_001230785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/785/GCA_001230785.1_7038_3_47	-	OXC6297
Burkholderia sp. b13	1761774	PRJEB18879	360786	Proteobacteria	Betaproteobacteria	3.57926	60.6	-	FTPM01	2	3134	2795	1/19/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487768	GCA_900155955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/955/GCA_900155955.1_IMG-taxon_2599185245_annotated_assembly	-	B13
Cutibacterium acnes	1747	PRJNA327854	327854	Terrabacteria group	Actinobacteria	2.47833	60.1	-	MAUW01	16	2500	2371	10/3/16	4/5/17	Contig	Nantes University Hospital	SAMN05360246	GCA_001750545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/545/GCA_001750545.1_ASM175054v1	-	NTS_2004_10708
Staphylococcus haemolyticus	1283	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.42358	32.6	-	JVRQ01	92	2374	2278	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197356	GCA_001071555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/555/GCA_001071555.1_ASM107155v1	26230489	164_SHAE
Enterobacter cloacae subsp. cloacae	336306	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.44427	54.4	-	LRIO01	181	5437	5130	1/22/16	3/27/17	Contig	JCVI	SAMN04431024	GCA_001525175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/175/GCA_001525175.1_ASM152517v1	-	SMART_1493
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.42342	57	-	NEYH01	153	4339	4092	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN04329639	GCA_002198995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/995/GCA_002198995.1_ASM219899v1	-	MOD1-GK1326
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15445	64.1	-	CSZL01	22	5271	4996	3/24/15	3/18/17	Contig	SC	SAMEA1317699	GCA_001216685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/685/GCA_001216685.1_7520_7_39	-	PAP159
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.92152	66.8	-	LPBA01	131	7295	6869	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449363	GCA_001528225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/225/GCA_001528225.1_ASM152822v1	-	MSMB1795WGS
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.07764	38.7	-	NGCX01	68	3943	3761	5/15/17	5/23/17	Contig	JCVI	SAMN06837777	GCA_002137175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/175/GCA_002137175.1_ASM213717v1	-	PR370
Enterobacter hormaechei subsp. oharae	301102	PRJNA271006	271006	Proteobacteria	Gammaproteobacteria	4.93877	55	-	JZLB01	118	4962	4731	3/30/15	3/26/17	Contig	JCVI	SAMN03277204	GCA_000965965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/965/GCA_000965965.1_ASM96596v1	-	CIDEIMsCOL17
Klebsiella aerogenes	548	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.07296	55.1	-	LVVF01	202	5181	4728	4/25/16	4/6/17	Contig	JCVI	SAMN04572706	GCA_001631895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/895/GCA_001631895.1_ASM163189v1	-	GN06322
Pseudomonas sp. HMSC070B12	1715094	PRJNA296222	296222	Proteobacteria	Gammaproteobacteria	6.38173	66.4	-	LTOY01	84	6121	5876	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498606	GCA_001837545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/545/GCA_001837545.1_ASM183754v1	-	HMSC070B12
Streptomyces sp. WMMB 322	1286821	PRJNA187213	187213	Terrabacteria group	Actinobacteria	6.59705	70.9	-	LIPX01	32	5668	5389	10/28/15	3/13/17	Scaffold	DOE Joint Genome Institute	SAMN02745757	GCA_001418285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/285/GCA_001418285.1_ASM141828v1	-	WMMB 322
Bacillus sp. SA1-12	1455638	PRJNA280023	280023	Terrabacteria group	Firmicutes	6.87964	37	-	LATZ01	141	6399	5987	4/28/15	4/18/17	Contig	Institute of Microbial Technology	SAMN03453603	GCA_000981385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/385/GCA_000981385.1_ASM98138v1	-	SA1-12
Acinetobacter sp. 1424608	1310779	PRJNA194855	194855	Proteobacteria	Gammaproteobacteria	3.90483	38.7	-	JFXL01	55	3815	3552	3/11/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02415058	GCA_000588255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/255/GCA_000588255.1_ASM58825v1	-	1424608
Clostridium sp. CAG:448	1262808	PRJEB884	206843	Terrabacteria group	Firmicutes	2.28228	52.5	-	CBFP01	194	2120	2084	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138558	GCA_000433415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/415/GCA_000433415.1_MGS448	-	-
Sphingomonas sp. NFR15	1566282	PRJEB16172	348947	Proteobacteria	Alphaproteobacteria	4.39867	67	-	FMWX01	21	4048	3932	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159340	GCA_900103265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/265/GCA_900103265.1_IMG-taxon_2599185354_annotated_assembly	-	NFR15
Rhodococcus sp. 05-340-2	2022504	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.98348	64.6	-	NOYU01	43	5655	5510	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376374	GCA_002258915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/915/GCA_002258915.1_ASM225891v1	-	05-340-2
Enterobacter cloacae complex sp. SMART_763	1870951	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.19048	55.6	-	LPPF01	81	5128	4904	12/21/15	4/20/17	Contig	JCVI	SAMN04252929	GCA_001472715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/715/GCA_001472715.1_SMART_763.v1	-	SMART_763
Staphylococcus sp. HMSC057G10	1715043	PRJNA296170	296170	Terrabacteria group	Firmicutes	2.51324	32.6	-	LTRA01	102	2465	2363	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498576	GCA_001836395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/395/GCA_001836395.1_ASM183639v1	-	HMSC057G10
Corynebacterium sp. HMSC061H03	1739291	PRJNA299941	299941	Terrabacteria group	Actinobacteria	2.48296	58.8	-	LTNV01	47	2166	2079	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498854	GCA_001838215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/215/GCA_001838215.1_ASM183821v1	-	HMSC061H03
Streptococcus sp. SK140	1095726	PRJNA75169	75169	Terrabacteria group	Firmicutes	1.90256	39.4	-	AJML01	46	1899	1787	4/23/12	4/7/17	Contig	J. Craig Venter Institute	SAMN00761856	GCA_000259525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/525/GCA_000259525.1_SspSK140v1.0	-	SK140
Mycobacterium sp. 852002-51152_SCH6134967	1834096	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.30975	66.8	-	LZIK01	73	5083	4945	6/17/16	4/13/17	Contig	JCVI	SAMN04696151	GCA_001667105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/105/GCA_001667105.1_ASM166710v1	-	852002-51152_SCH6134967
Paenibacillus sp. Soil724D2	1736392	PRJNA298127	298127	Terrabacteria group	Firmicutes	8.28953	44.6	-	LMRY01	60	7389	7145	11/2/15	4/11/17	Scaffold	ETH Zurich	SAMN04155657	GCA_001427935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/935/GCA_001427935.1_Soil724D2	26633631	Soil724D2
Prochlorococcus sp. scB241_527I9	1471447	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.14829	31.6	-	JFKX01	159	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671318	GCA_000635315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/315/GCA_000635315.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Microbacterium sp. UBA4541	1946948	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.53272	65.9	-	DGLP01	247	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453829	GCA_002388025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/025/GCA_002388025.1_ASM238802v1	28894102	-
Rhizobium sp. TBD182	1560230	PRJDB5331	354998	Proteobacteria	Alphaproteobacteria	5.48224	58.6	-	BDLN01	35	5237	4943	12/17/16	4/16/17	Scaffold	National Agriculture and Food Research Organization	SAMD00068841	GCA_001950375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/375/GCA_001950375.1_TBD182_assembly01	-	-
Mesorhizobium sp. 61-13	1895780	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	3.92325	60.9	-	MKRZ01	216	3894	3502	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660516	GCA_001897075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/075/GCA_001897075.1_ASM189707v1	-	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.80043	57	-	FXSS01	110	5868	5512	4/28/17	5/6/17	Scaffold	SC	SAMEA2609569	GCA_900182235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/182/235/GCA_900182235.1_14936_2_71	-	3189STDY5864924
Staphylococcus argenteus	985002	PRJEB20633	390605	Terrabacteria group	Firmicutes	2.76019	32.3	-	FXVJ01	210	2728	2525	6/15/17	7/5/17	Scaffold	Geogentics	SAMEA104034163	GCA_900183855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/855/GCA_900183855.1_O-10	-	-
Staphylococcus argenteus	985002	PRJEB20633	390605	Terrabacteria group	Firmicutes	2.80973	32.3	-	FXVH01	80	2820	2630	6/15/17	7/5/17	Scaffold	Geogentics	SAMEA104034156	GCA_900183865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/865/GCA_900183865.1_O-1	-	-
Klebsiella quasipneumoniae subsp. similipneumoniae	1463164	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.80033	57	-	FXSU01	107	5891	5521	5/3/17	5/24/17	Scaffold	SC	SAMEA2609536	GCA_900182515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/182/515/GCA_900182515.1_14936_2_55	-	3189STDY5864908
Mesorhizobium sp. 65-26	1895781	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	6.84053	64.7	-	MKVL01	42	6411	6280	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660606	GCA_001899205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/205/GCA_001899205.1_ASM189920v1	-	-
Rhizobium sp. NFIX02	1566265	PRJEB16305	348897	Proteobacteria	Alphaproteobacteria	5.61113	59.1	-	FMYC01	34	5514	5276	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159422	GCA_900104545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/545/GCA_900104545.1_IMG-taxon_2600255308_annotated_assembly	-	NFIX02
Prochlorococcus sp. scB241_527L16	1471449	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.977191	31.1	-	JFKZ01	183	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671320	GCA_000635335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/335/GCA_000635335.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Paenibacillus sp. FJAT-29882	1729691	PRJNA299753	299753	Terrabacteria group	Firmicutes	5.3211	37.4	-	LMVB01	21	5105	4806	1/11/16	4/11/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04102800	GCA_001510645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/645/GCA_001510645.1_ASM151064v1	-	FJAT-29882
Mycobacterium sp. 852002-51163_SCH5372311	1834097	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.52938	65.6	-	LZIJ01	210	5145	4883	6/17/16	4/13/17	Contig	JCVI	SAMN04696152	GCA_001667115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/115/GCA_001667115.1_ASM166711v1	-	852002-51163_SCH5372311
Streptococcus sp. BS35b	1105032	PRJNA78577	78577	Terrabacteria group	Firmicutes	1.85846	41.2	-	ALKH01	17	1847	1742	8/10/12	4/7/17	Contig	J. Craig Venter Institute	SAMN00828789	GCA_000286475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/475/GCA_000286475.1_SspBS35bv1.0	-	BS35b
Corynebacterium sp. HMSC072D01	1739403	PRJNA300053	300053	Terrabacteria group	Actinobacteria	2.4626	58.9	-	LTNT01	39	2169	2079	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498681	GCA_001838245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/245/GCA_001838245.1_ASM183824v1	-	HMSC072D01
Staphylococcus sp. HMSC058E01	1715150	PRJNA296278	296278	Terrabacteria group	Firmicutes	2.77845	32.7	-	LTQX01	73	2875	2651	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498641	GCA_001836465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/465/GCA_001836465.1_ASM183646v1	-	HMSC058E01
Enterobacter cloacae complex sp. SMART_930	1870952	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.192	55.6	-	LPOS01	92	5106	4835	12/21/15	4/20/17	Contig	JCVI	SAMN04252942	GCA_001472995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/995/GCA_001472995.1_SMART_930.v1	-	SMART_930
Rhodococcus sp. 05-340-1	2022505	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.98322	64.6	-	NOYV01	44	5661	5512	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376375	GCA_002258925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/925/GCA_002258925.1_ASM225892v1	-	05-340-1
Sphingomonas sp. OV641	1881068	PRJEB16789	350915	Proteobacteria	Alphaproteobacteria	4.44076	65.5	-	FNZB01	35	4244	4087	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05428950	GCA_900109205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/205/GCA_900109205.1_IMG-taxon_2684623004_annotated_assembly	-	OV641
Clostridium sp. CAG:356	1262800	PRJEB848	206694	Terrabacteria group	Firmicutes	1.55159	28	-	CBGY01	68	1526	1500	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138567	GCA_000433595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/595/GCA_000433595.1_MGS356	-	-
Acinetobacter sp. 88816	1310761	PRJNA194837	194837	Proteobacteria	Gammaproteobacteria	4.10618	38.8	-	JFYG01	97	4078	3780	3/11/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02415080	GCA_000588335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/335/GCA_000588335.1_ASM58833v1	-	88816
Bacillus sp. L_1B0_12	1617024	PRJNA275560	275560	Terrabacteria group	Firmicutes	3.63469	41.3	-	LAVH01	113	3748	3650	4/30/15	4/10/17	Contig	University of Malaya	SAMN03349748	GCA_000986655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/986/655/GCA_000986655.1_ASM98665v1	-	L_1B0_12
Streptomyces sp. Root369	1736523	PRJNA297942	297942	Terrabacteria group	Actinobacteria	10.7413	70.3	-	LMDL01	65	9839	9240	11/2/15	3/12/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155792	GCA_001425805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/805/GCA_001425805.1_Root369	26633631	Root369
Pseudomonas sp. HMSC071F02	1715090	PRJNA296218	296218	Proteobacteria	Gammaproteobacteria	6.3059	66.4	-	LTOT01	92	6081	5820	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498605	GCA_001837685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/685/GCA_001837685.1_ASM183768v1	-	HMSC071F02
Klebsiella aerogenes	548	PRJNA350242	350242	Proteobacteria	Gammaproteobacteria	5.01828	55.2	-	MOAA01	42	4928	4730	1/9/17	4/6/17	Contig	"Beijing Honor Tech Co.,Ltd "	SAMN05935553	GCA_001939895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/895/GCA_001939895.1_ASM193989v1	-	eae
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA271006	271006	Proteobacteria	Gammaproteobacteria	5.25432	55.1	-	JZLC01	154	5223	4956	3/30/15	3/26/17	Contig	JCVI	SAMN03277205	GCA_000965975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/975/GCA_000965975.1_ASM96597v1	-	CIDEIMsCOL18
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.97071	38.8	-	NGDI01	61	3871	3700	5/15/17	5/23/17	Contig	JCVI	SAMN06837766	GCA_002137365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/365/GCA_002137365.1_ASM213736v1	-	PR318
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.07523	67.5	-	LPBY01	85	6376	6040	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449387	GCA_001528245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/245/GCA_001528245.1_ASM152824v1	-	MSMB2009WGS
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.10331	64.1	-	CSZA01	18	5211	4907	3/24/15	3/18/17	Contig	SC	SAMEA1317698	GCA_001217485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/485/GCA_001217485.1_7520_7_27	-	PAP147
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.53063	56.8	-	NHQS01	309	4394	4175	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN07139877	GCA_002199105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/105/GCA_002199105.1_ASM219910v1	-	E772
Enterobacter cloacae subsp. cloacae	336306	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.08105	54.9	-	LRJH01	38	4975	4781	1/22/16	3/27/17	Contig	JCVI	SAMN04431005	GCA_001525285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/285/GCA_001525285.1_ASM152528v1	-	SMART_1312
Staphylococcus haemolyticus	1283	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.52506	32.7	-	JVMX01	111	2490	2369	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197479	GCA_001072095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/095/GCA_001072095.1_ASM107209v1	26230489	285_SHAE
Cutibacterium acnes	1747	PRJNA338743	338743	Terrabacteria group	Actinobacteria	2.4801	60	-	MDGS01	21	2506	2371	10/3/16	4/5/17	Contig	Nantes University Hospital	SAMN05567826	GCA_001750605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/605/GCA_001750605.1_ASM175060v1	-	HB
Burkholderia sp. b14	1761775	PRJEB18862	360719	Proteobacteria	Betaproteobacteria	3.65365	60.6	-	FTPJ01	3	3324	2929	1/19/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487769	GCA_900156195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/195/GCA_900156195.1_IMG-taxon_2603880219_annotated_assembly	-	B14
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.77296	31.3	-	CUVK01	13	1863	1753	3/31/15	3/18/17	Contig	SC	SAMEA1401511	GCA_001230805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/805/GCA_001230805.1_7213_3_8	-	OXC6551
Lactobacillus plantarum	1590	PRJNA314113	314113	Terrabacteria group	Firmicutes	3.34275	44.3	-	LUXJ01	239	3285	3020	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04528933	GCA_001633745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/745/GCA_001633745.1_ASM163374v1	-	Nizo3893
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.20281	59.5	-	JVIF01	74	4925	4757	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197601	GCA_001063325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/325/GCA_001063325.1_ASM106332v1	26230489	410_SMAR
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.52258	46.9	-	CPYM01	116	4262	4009	3/23/15	3/26/17	Scaffold	SC	SAMEA980218	GCA_001150845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/845/GCA_001150845.1_4976_3_6	-	ERL082756
Corynebacterium diphtheriae bv. mitis	1806053	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.44923	53.6	-	LSWJ01	47	2394	2190	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496983	GCA_002202665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/665/GCA_002202665.1_S67	-	987
Staphylococcus aureus Bmb9393	1321369	PRJNA196937	196937	Terrabacteria group	Firmicutes	2.98346	32.8966	chromosome:NC_021670.1/CP005288.1; plasmid pBmb9393:NC_021657.1/CP005289.1	-	2	3163	2977	7/5/13	3/2/17	Complete Genome	LNCC	SAMN02603524	GCA_000418345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/345/GCA_000418345.1_ASM41834v1	23929475	Bmb9393
Brucella melitensis F10/05-2	1160211	PRJNA173600	173600	Proteobacteria	Alphaproteobacteria	3.31967	57.2	-	AQNH01	28	3403	3154	4/16/13	4/1/17	Contig	Broad Institute	SAMN00811209	GCA_000366925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/925/GCA_000366925.1_Bruc_meli_F10_05-2_V1	-	F10/05-2
Lactobacillus rhamnosus	47715	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.15985	46.6	-	JVDP01	100	3176	2969	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197721	GCA_001063655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/655/GCA_001063655.1_ASM106365v1	26230489	526_LRHA
Pasteurella multocida subsp. septica	115545	PRJNA355236	355236	Proteobacteria	Gammaproteobacteria	2.33538	40.3	-	MTDZ01	15	2248	2157	3/8/17	3/11/17	Scaffold	INRA	SAMN06140937	GCA_002023835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/835/GCA_002023835.1_ASM202383v1	-	CIRMBP-0812
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12869	41.2	-	CVYC01	79	2053	1888	6/23/15	3/26/17	Contig	SC	SAMEA1032873	GCA_001176965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/965/GCA_001176965.1_6817_2_92	-	EQUI0045
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.3576	66.8	-	JWCW01	251	3983	3860	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197064	GCA_001070185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/185/GCA_001070185.1_ASM107018v1	26230489	1100_SMAL
Enterococcus faecium EnGen0004	1138892	PRJNA82435	82435	Terrabacteria group	Firmicutes	2.79706	38.1	-	AHWT01	8	2856	2611	12/17/12	3/24/17	Scaffold	Broad Institute	SAMN00779804	GCA_000321705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/705/GCA_000321705.1_Ente_faec_E1258_V1	-	E1258
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.09806	52.6	-	CQMZ01	70	2455	2119	3/23/15	4/11/17	Contig	SC	SAMEA1677431	GCA_001103185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/185/GCA_001103185.1_8727_5_68	-	GCGS218
Streptococcus mutans U2A	857116	PRJNA49831	49831	Terrabacteria group	Firmicutes	2.09943	36.8	-	AHSU01	163	2093	1961	2/11/13	3/23/17	Contig	Cornell University	SAMN02428977	GCA_000339475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/475/GCA_000339475.1_ASM33947v1	23228887	U2A
Enterococcus faecalis EnGen0060	1151201	PRJNA85653	85653	Terrabacteria group	Firmicutes	2.92276	37.4	-	AIIZ01	4	2997	2855	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00792306	GCA_000390805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/805/GCA_000390805.1_Ente_faec_7330257-1_V1	-	7330257-1
Clostridium botulinum	1491	PRJNA257008	257008	Terrabacteria group	Firmicutes	3.95194	27.1	-	LHUM01	61	3613	3421	8/31/15	3/26/17	Contig	µFORGE	SAMN03862114	GCA_001276965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/965/GCA_001276965.1_CBOT008-SEQ-1-ASM-1	-	ATCC 17786
Staphylococcus aureus subsp. aureus ST228	1074919	PRJEA71347	71347	Terrabacteria group	Firmicutes	2.79207	32.8931	chromosome:NC_020532.1/HE579063.1; plasmid pI3T3:NC_020565.1/HE579064.1	-	2	2883	2707	10/5/12	3/4/17	Complete Genome	Swiss Institute of Bioinformatics - Vital-IT group	SAMEA3283122	GCA_000967365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/365/GCA_000967365.1_ASM96736v1	22720005	ST228
Bacillus subtilis	1423	PRJEB9876	290051	Terrabacteria group	Firmicutes	3.99376	43.7	-	CYHN01	80	4083	3944	8/27/15	3/26/17	Contig	University of Liverpool	SAMEA3484405	GCA_001286865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/865/GCA_001286865.1_Bacillus_JRS6	-	-
Vibrio parahaemolyticus S173	1394705	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	4.95124	45.3	-	AWHH01	407	4728	4568	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02339019	GCA_000489035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/035/GCA_000489035.1_S173	-	S173
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.94269	38	-	MLLZ01	223	2016	1799	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297039	GCA_001868315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/315/GCA_001868315.1_ASM186831v1	27118061	AWRIB323
Xanthomonas oryzae pv. oryzae	64187	PRJNA269459	269459	Proteobacteria	Gammaproteobacteria	4.36872	63.8	-	JXGD01	456	4383	3480	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252568	GCA_001928685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/685/GCA_001928685.1_ASM192868v1	-	IXO222
Xanthomonas citri pv. glycines	473421	PRJNA344018	344018	Proteobacteria	Gammaproteobacteria	5.18397	64.6	-	MKCQ01	28	4729	4336	10/6/16	4/5/17	Scaffold	Institute of Molecular Biology College of Life Science	SAMN05818161	GCA_001753585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/585/GCA_001753585.1_ASM175358v1	-	12609
Brucella abortus levi gila	1160201	PRJNA173623	173623	Proteobacteria	Alphaproteobacteria	3.286	57.2	-	AQMI01	6	3378	3150	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811184	GCA_000365645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/645/GCA_000365645.1_Bruc_abor_levi_gila_V1	-	levi gila
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.78907	32.2	-	MRKT01	112	1857	1550	4/19/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773859	GCA_002100415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/415/GCA_002100415.1_ASM210041v1	28348839	FDC338
Clostridioides difficile CD170	1151296	PRJNA85765	85765	Terrabacteria group	Firmicutes	4.16776	28.2	-	AVIA01	207	3982	3758	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766596	GCA_000449505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/505/GCA_000449505.2_ASM44950v2	-	CD170
Vibrio cholerae HC-64A1	991980	PRJNA63967	63967	Proteobacteria	Gammaproteobacteria	4.03204	47.5	-	AGUT02	93	3839	3680	12/10/12	3/23/17	Scaffold	Institute for Genome Sciences	SAMN00262231	GCA_000327105.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/105/GCA_000327105.3_ASM32710v3	-	HC-64A1
Bacillus thuringiensis serovar balearica	180879	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.92111	34.9	-	NFDE01	68	6300	5846	5/17/17	6/16/17	Contig	Huazhong Agricultural University	SAMN05934520	GCA_002147065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/065/GCA_002147065.1_ASM214706v1	-	BGSC 4BK1
Chlamydia trachomatis	813	PRJNA362456	362456	PVC group	Chlamydiae	1.04025	41.3	chromosome:NZ_CP019387.1/CP019387.1	-	1	966	894	6/13/17	6/15/17	Chromosome	University of Kansas	SAMN06239971	GCA_002192635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/635/GCA_002192635.1_ASM219263v1	28347402	434Bu
Burkholderia pseudomallei	28450	PRJNA244248	244248	Proteobacteria	Betaproteobacteria	7.50507	67.8	-	JPNV01	2	7761	7073	9/23/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02851145	GCA_000757075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/075/GCA_000757075.1_BDM	25414490	BDM
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.70083	66.7	-	MUTF01	113	8176	7801	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001905	GCA_001992345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/345/GCA_001992345.1_ASM199234v1	-	VC11261
Bacteroides fragilis	817	PRJNA345344	345344	FCB group	Bacteroidetes/Chlorobi group	5.37599	43.5	-	MKXL01	73	4825	4561	10/21/16	4/5/17	Contig	Odense University Hospital	SAMN05860967	GCA_001816225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/225/GCA_001816225.1_ASM181622v1	-	14-106904-1
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.27822	50.4	-	NQCQ01	179	5578	5173	8/11/17	8/15/17	Contig	JCVI	SAMN07450612	GCA_002247975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/975/GCA_002247975.1_ASM224797v1	-	ECCTRSRTH07
Legionella pneumophila	446	PRJNA281265	281265	Proteobacteria	Gammaproteobacteria	3.24798	38.2	-	LBAI01	44	2948	2823	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03486838	GCA_001582565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/565/GCA_001582565.1_ASM158256v1	26888563	ATCC 33154
Pseudomonas syringae pv. syringae	321	PRJNA287078	287078	Proteobacteria	Gammaproteobacteria	5.97599	59.2	-	LGKT01	157	5408	5112	9/18/15	3/26/17	Contig	University of Toronto	SAMN03837778	GCA_001293705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/705/GCA_001293705.1_PsB48	-	B48
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.31398	41.3	-	CEEX01	530	2251	2074	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233915	GCA_000877055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/055/GCA_000877055.1_Velvet_assembly	-	LS3W
Streptococcus agalactiae CCUG 25532	1154809	PRJNA86213	86213	Terrabacteria group	Firmicutes	2.07537	35.3	-	ALQM01	20	2152	2061	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991060	GCA_000288715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/715/GCA_000288715.1_ASM28871v1	-	CCUG 25532
Acinetobacter baumannii NIPH 70	1217628	PRJNA183253	183253	Proteobacteria	Gammaproteobacteria	4.06208	39.3	-	APRC01	15	3878	3646	4/16/13	3/15/17	Scaffold	Broad Institute	SAMN01828144	GCA_000369305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/305/GCA_000369305.1_Acin_baum_NIPH_70_V1	-	NIPH 70
Pseudomonas aeruginosa LESB65	1408273	PRJNA222519	222519	Proteobacteria	Gammaproteobacteria	6.527	66.4	chromosome:NZ_CP006983.1/CP006983.1	-	1	6218	6046	3/3/14	3/16/17	Chromosome	"IBIS, University Laval"	SAMN03081518	GCA_000583955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/955/GCA_000583955.1_ASM58395v1	-	LESB65
Shigella flexneri Shi06GS48	1434132	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.5221	50.5	-	AZOK01	301	5030	4335	1/29/14	2/23/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437367	GCA_000565585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/585/GCA_000565585.1_ASM56558v1	24452172	Shi06GS48
Bacillus anthracis	1392	PRJNA340359	340359	Terrabacteria group	Firmicutes	5.14056	35.1	-	MEAQ01	390	5597	5276	10/12/16	3/28/17	Contig	The University of Burdwan	SAMN05712814	GCA_001758315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/315/GCA_001758315.1_ASM175831v1	-	PFAB2
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2816	1291334	PRJNA189001	189001	Spirochaetes	Spirochaetia	4.63688	35	-	AOVP01	137	4148	3778	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920566	GCA_000343655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/655/GCA_000343655.1_CA_glsol124	-	Fiocruz LV2816
Streptococcus pyogenes ABC020048395	1439180	PRJNA233173	233173	Terrabacteria group	Firmicutes	1.87474	38.6	-	JJGP01	5	1939	1812	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567522	GCA_000630445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/445/GCA_000630445.1_Stre_pyog_ABC020048395_V1	-	ABC020048395
Neisseria meningitidis	487	PRJNA244853	244853	Proteobacteria	Betaproteobacteria	2.12149	51.5	-	JMDD01	80	2445	2092	7/20/15	3/21/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02729280	GCA_001183365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/365/GCA_001183365.1_Nm360624	25989189	360624
Helicobacter pylori	210	PRJDB4296	362565	Proteobacteria	delta/epsilon subdivisions	1.58758	38.9	chromosome:AP017348.1	-	1	1573	1557	1/18/17	1/18/17	Chromosome	"Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture"	SAMD00042477	GCA_002357655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/655/GCA_002357655.1_ASM235765v1	-	F67
Streptococcus pneumoniae SPN021198	869308	PRJNA50803	50803	Terrabacteria group	Firmicutes	2.05013	39.9	-	CACH01	22	2248	2009	8/3/10	3/8/17	Contig	Wellcome Trust Sanger Institute	SAMEA3138307	GCA_000180535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/180/535/GCA_000180535.1_ASM18053v1	24130509	SPN021198
Staphylococcus aureus subsp. aureus ST228	1074919	PRJEA71353	71353	Terrabacteria group	Firmicutes	2.79217	32.893	chromosome:NC_020536.1/HE579069.1; plasmid pI6T6:NC_020567.1/HE579070.1	-	2	2882	2709	10/5/12	3/4/17	Complete Genome	Swiss Institute of Bioinformatics - Vital-IT group	SAMEA3283124	GCA_000967385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/385/GCA_000967385.1_ASM96738v1	22720005	ST228
Mycobacterium tuberculosis	1773	PRJNA400352	400352	Terrabacteria group	Actinobacteria	4.41171	65.6	chromosome:NZ_CP023169.1/CP023169.1	-	1	4284	4128	9/12/17	9/14/17	Chromosome	National Environmental Engineering Research Institute-CSIR	SAMN07570351	GCA_002290145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/145/GCA_002290145.1_ASM229014v1	-	S3
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.83592	38	-	FFIS01	14	1812	1661	2/9/16	3/27/17	Scaffold	SC	SAMEA2674679	GCA_900022505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/505/GCA_900022505.1_14412_3_86	-	2842STDY5882019
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.21688	69	-	BDNT01	268	4973	4682	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076671	GCA_002089595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/595/GCA_002089595.1_ASM208959v1	28045086	Kin-16
Lactococcus lactis	1358	PRJEB15957	348231	Terrabacteria group	Firmicutes	2.51422	35.2	-	FMTF01	51	2562	2348	10/14/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02982984	GCA_900099625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/625/GCA_900099625.1_IMG-taxon_2597490350_annotated_assembly	-	ATCC 19435
Bacillus cereus VD045	1053225	PRJNA70417	70417	Terrabacteria group	Firmicutes	6.51428	34.7	-	AHET01	17	6795	6328	8/15/12	5/18/17	Scaffold	Broad Institute	SAMN02596857	GCA_000291215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/215/GCA_000291215.1_Baci_cere_VD045_V1	-	VD045
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.47905	32.2	-	JWFP01	172	2375	2281	7/10/15	3/26/17	Contig	University of Washington	SAMN03196993	GCA_001069995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/995/GCA_001069995.1_ASM106999v1	26230489	1029_SEPI
Staphylococcus aureus subsp. aureus ST228	1074919	PRJEA71349	71349	Terrabacteria group	Firmicutes	2.79069	32.8912	chromosome:NC_020533.1/HE579065.1; plasmid pI4T8:NC_020534.1/HE579066.1	-	2	2883	2711	10/5/12	3/2/17	Complete Genome	Swiss Institute of Bioinformatics - Vital-IT group	SAMEA2272458	GCA_000382965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/965/GCA_000382965.1_ASM38296v1	22720005	ST228
Pseudomonas fluorescens	294	PRJNA347476	347476	Proteobacteria	Gammaproteobacteria	5.97056	60.2	-	MRST01	27	5473	5286	12/13/16	4/6/17	Scaffold	University of Copenhagen	SAMN05967209	GCA_001902145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/145/GCA_001902145.1_ASM190214v1	-	EK007-RG4
Yersinia pestis biovar Orientalis str. BA200901990	1084230	PRJNA73105	73105	Proteobacteria	Gammaproteobacteria	4.52749	47.6	-	AGJW01	210	4244	4050	3/22/12	5/19/17	Contig	US Army Edgewood Chemical Biological Center	SAMN01831185	GCA_000255815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/815/GCA_000255815.1_ASM25581v1	22359605	BA200901990
Staphylococcus aureus subsp. aureus ST228	1074919	PRJEA71343	71343	Terrabacteria group	Firmicutes	2.79036	32.8912	chromosome:NC_020529.1/HE579059.1; plasmid pI1T1:NC_020530.1/HE579060.1	-	2	2881	2714	10/5/12	3/4/17	Complete Genome	Swiss Institute of Bioinformatics - Vital-IT group	SAMEA3283121	GCA_000967325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/325/GCA_000967325.1_ASM96732v1	22720005	ST228
Staphylococcus aureus subsp. aureus ST228	1074919	PRJEA71345	71345	Terrabacteria group	Firmicutes	2.79037	32.8912	chromosome:NC_020564.1/HE579061.1; plasmid pI2T2:NC_020531.1/HE579062.1	-	2	2881	2710	10/5/12	3/4/17	Complete Genome	Swiss Institute of Bioinformatics - Vital-IT group	SAMEA3283122	GCA_000967345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/345/GCA_000967345.1_ASM96734v1	22720005	ST228
Staphylococcus aureus	1280	PRJEB6403	251923	Terrabacteria group	Firmicutes	2.80917	32.89	chromosome 1:NZ_LN831036.1/LN831036.1; plasmid 2:NZ_LN831037.1/LN831037.1; plasmid 3:NZ_LN831038.1/LN831038.1	-	3	2907	2739	3/22/15	3/5/17	Complete Genome	SC	SAMEA2479566	GCA_001457495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/495/GCA_001457495.1_NCTC13435	-	NCTC13435
Staphylococcus aureus subsp. aureus ST398	523796	PRJEA29427	29427	Terrabacteria group	Firmicutes	2.88537	32.8898	chromosome:NC_017333.1/AM990992.1; plasmid pS0385-1:NC_017334.1/AM990993.1; plasmid pS0385-2:NC_017335.1/AM990994.1; plasmid pS0385-3:NC_017336.1/AM990995.1	-	4	3010	2810	1/7/10	3/3/17	Complete Genome	University Medical Centre Utrecht	SAMEA2272644	GCA_000009585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/585/GCA_000009585.1_ASM958v1	20546576	type strain:ST398
Staphylococcus aureus subsp. aureus	46170	PRJNA354450	354450	Terrabacteria group	Firmicutes	2.92724	32.8789	chromosome:NZ_CP018766.1/CP018766.1; plasmid pUCI62:NZ_CP018767.1/CP018767.1	-	2	3062	2890	1/30/17	3/21/17	Complete Genome	USDA-ARS	SAMN06046111	GCA_001975005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/005/GCA_001975005.1_ASM197500v1	-	UCI62
Staphylococcus aureus	1280	PRJNA390063	390063	Terrabacteria group	Firmicutes	2.8197	32.8786	chromosome:NZ_CP021907.1/CP021907.1; plasmid pG478:NZ_CP021908.1/CP021908.1	-	2	2888	2710	6/20/17	6/22/17	Complete Genome	Alere Technologies Jena GmbH	SAMN07212544	GCA_002202095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/095/GCA_002202095.1_ASM220209v1	-	Seattle 1945
Yersinia pestis biovar Orientalis str. BA200902009	1084231	PRJNA73107	73107	Proteobacteria	Gammaproteobacteria	4.56381	47.5	-	AGJX01	256	4316	4072	3/22/12	5/19/17	Contig	US Army Edgewood Chemical Biological Center	SAMN01831186	GCA_000255835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/835/GCA_000255835.1_ASM25583v1	22359605	BA200902009
Pseudomonas fluorescens	294	PRJNA347476	347476	Proteobacteria	Gammaproteobacteria	5.97509	60.3	-	MKYU01	234	5481	5261	1/4/17	4/6/17	Scaffold	University of Copenhagen	SAMN05890482	GCA_001931665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/665/GCA_001931665.1_ASM193166v1	-	EK007-7t-asp
Staphylococcus aureus	1280	PRJNA390063	390063	Terrabacteria group	Firmicutes	2.80635	32.8784	chromosome:NZ_CP021905.1/CP021905.1; plasmid pG477:NZ_CP021906.1/CP021906.1	-	2	2874	2698	6/20/17	6/22/17	Complete Genome	Alere Technologies Jena GmbH	SAMN07212543	GCA_002202075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/075/GCA_002202075.1_ASM220207v1	-	Seattle 1945
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.53602	33	-	JWFL01	390	2389	2292	7/10/15	3/26/17	Contig	University of Washington	SAMN03196997	GCA_001070015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/015/GCA_001070015.1_ASM107001v1	26230489	1032_SEPI
Bacillus cereus MSX-A12	1053221	PRJNA70409	70409	Terrabacteria group	Firmicutes	5.77891	35.5	-	AHEP01	51	6178	5820	8/15/12	5/18/17	Scaffold	Broad Institute	SAMN02596853	GCA_000291235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/235/GCA_000291235.1_Baci_cere_MSX-A12_V1	-	MSX-A12
Lactococcus lactis subsp. cremoris TIFN5	1234875	PRJNA175673	175673	Terrabacteria group	Firmicutes	2.54151	35.5	-	ATBC01	646	2555	2232	8/19/13	1/8/14	Contig	Top Institute Food and Nutrition	SAMN02472112	GCA_000447825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/825/GCA_000447825.1_LLT5.01	23823494	TIFN5
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.12659	69.1	-	BDNU01	347	4903	4591	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076672	GCA_002089615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/615/GCA_002089615.1_ASM208961v1	28045086	Kin-27
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.86996	38	-	FFJC01	26	1901	1753	2/9/16	3/27/17	Scaffold	SC	SAMEA2674745	GCA_900022515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/515/GCA_900022515.1_14412_4_28	-	2842STDY5882056
Mycobacterium tuberculosis	1773	PRJNA400352	400352	Terrabacteria group	Actinobacteria	4.41432	65.6	chromosome:NZ_CP023170.1/CP023170.1	-	1	4293	4076	9/12/17	9/14/17	Chromosome	National Environmental Engineering Research Institute-CSIR	SAMN07570350	GCA_002290165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/165/GCA_002290165.1_ASM229016v1	-	C3
Staphylococcus aureus	1280	PRJDB4160	297105	Terrabacteria group	Firmicutes	2.80322	32.8784	chromosome Unknown:NZ_AP014942.1/AP014942.1; plasmid pFDA209P:NZ_AP014943.1/AP014943.1	-	2	2912	2732	9/25/15	3/5/17	Complete Genome	Juntendo University	SAMD00039082	GCA_001548295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/295/GCA_001548295.1_ASM154829v1	26564052	FDA209P
Streptococcus pneumoniae SPN061370	869801	PRJNA50895	50895	Terrabacteria group	Firmicutes	2.13676	39.6	-	CACJ01	37	2375	2062	8/3/10	3/9/17	Contig	The Wellcome Trust Sanger Institute	SAMEA3138309	GCA_000180575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/180/575/GCA_000180575.1_ASM18057v1	-	SPN061370
Helicobacter pylori	210	PRJDB4296	362565	Proteobacteria	delta/epsilon subdivisions	1.63163	38.9	chromosome:AP017349.1	-	1	1622	1581	1/18/17	1/18/17	Chromosome	"Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture"	SAMD00042478	GCA_002357675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/675/GCA_002357675.1_ASM235767v1	-	F70
Neisseria meningitidis	487	PRJNA244852	244852	Proteobacteria	Betaproteobacteria	2.09819	51.7	-	JMDE01	78	2441	2068	7/20/15	3/21/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02729279	GCA_001183375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/375/GCA_001183375.1_Nm311112	25989189	311112
Streptococcus pyogenes ABC020047993	1439169	PRJNA233171	233171	Terrabacteria group	Firmicutes	1.77841	38.4	-	JJGQ01	8	1808	1697	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567520	GCA_000630465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/465/GCA_000630465.1_Stre_pyog_ABC020047993_V1	-	ABC020047993
Leptospira interrogans serovar Copenhageni str. Fiocruz LV3076	1291338	PRJNA189005	189005	Spirochaetes	Spirochaetia	4.59795	35	-	AOVL01	133	4114	3752	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920121	GCA_000343675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/675/GCA_000343675.1_CA_glsol139	-	Fiocruz LV3076
Bacillus anthracis	1392	PRJNA325396	325396	Terrabacteria group	Firmicutes	5.45986	35	-	LZQX01	97	5936	5658	11/18/16	3/28/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05230475	GCA_001883885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/885/GCA_001883885.1_ASM188388v1	-	N1ZF-2
Shigella flexneri Shi06HN118	1434133	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.52644	50.5	-	AZOL01	317	5069	4351	1/29/14	2/22/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437368	GCA_000565605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/605/GCA_000565605.1_ASM56560v1	24452172	Shi06HN118
Pseudomonas aeruginosa LESlike1	1408274	PRJNA222520	222520	Proteobacteria	Gammaproteobacteria	6.50907	66.4	chromosome:NZ_CP006984.1/CP006984.1	-	1	6196	6011	3/3/14	3/16/17	Chromosome	"IBIS, University Laval"	SAMN03081519	GCA_000583975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/975/GCA_000583975.1_ASM58397v1	-	LESlike1
Acinetobacter baumannii NIPH 290	1217631	PRJNA183252	183252	Proteobacteria	Gammaproteobacteria	4.02649	39.3	-	APRD01	14	3945	3786	4/16/13	3/15/17	Scaffold	Broad Institute	SAMN01828143	GCA_000369325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/325/GCA_000369325.1_Acin_baum_NIPH_290_V1	-	NIPH 290
Streptococcus agalactiae CCUG 37430	1154810	PRJNA86223	86223	Terrabacteria group	Firmicutes	2.09639	35.2	-	ALQN01	20	2156	2045	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991063	GCA_000288735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/735/GCA_000288735.1_ASM28873v1	-	CCUG 37430
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.0529	41.1	-	CECX01	71	2050	1948	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233879	GCA_000877155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/155/GCA_000877155.1_Velvet_assembly	-	LL-Y
Pseudomonas syringae ICMP 11293	1198306	PRJNA296734	296734	Proteobacteria	Gammaproteobacteria	6.13605	58.9	-	LKEP01	60	5665	5352	12/15/15	3/27/17	Contig	New Zealand Institute for Plant & Food research	SAMN04102819	GCA_001466845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/845/GCA_001466845.1_ASM146684v1	27056212	ICMP 11293
Legionella pneumophila	446	PRJNA281270	281270	Proteobacteria	Gammaproteobacteria	3.54466	38.2	-	LBAJ01	37	3242	3089	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03486843	GCA_001582615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/615/GCA_001582615.1_ASM158261v1	26888563	AH104
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.81319	50.6	-	NQCR01	157	5089	4606	8/11/17	8/15/17	Contig	JCVI	SAMN07450610	GCA_002247995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/995/GCA_002247995.1_ASM224799v1	-	ECCTRSRTH09
Bacteroides fragilis	817	PRJNA267549	267549	FCB group	Bacteroidetes/Chlorobi group	5.49141	43.6	-	JVLQ01	150	4889	4639	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197512	GCA_001056335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/335/GCA_001056335.1_ASM105633v1	26230489	321_BFRA
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.3292	66.6	-	MUTG01	114	7870	7515	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001906	GCA_001992375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/375/GCA_001992375.1_ASM199237v1	-	VC11903
Burkholderia pseudomallei	28450	PRJNA244246	244246	Proteobacteria	Betaproteobacteria	7.26545	68	-	JPNW01	2	7519	6846	9/23/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02852972	GCA_000757095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/095/GCA_000757095.1_BDE	25414490	BDE
Chlamydia trachomatis 6276	564416	PRJNA32183	32183	PVC group	Chlamydiae	1.04318	41.3	chromosome:NZ_ABYD01000001.1/ABYD01000001.1	ABYD01	1	965	901	1/30/09	3/22/17	Chromosome	Oregon State University	SAMN02470780	GCA_000173475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/475/GCA_000173475.1_ASM17347v1	-	-
Bacillus thuringiensis serovar azorensis	180876	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.2701	35	-	NFDO01	219	6687	6182	5/17/17	6/15/17	Contig	Huazhong Agricultural University	SAMN05934537	GCA_002147085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/085/GCA_002147085.1_ASM214708v1	-	BGSC 4CB1
Vibrio cholerae HC-65A1	991981	PRJNA63969	63969	Proteobacteria	Gammaproteobacteria	4.02873	47.5	-	AGUU02	96	3839	3680	12/10/12	3/23/17	Scaffold	Institute for Genome Sciences	SAMN00262226	GCA_000327125.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/125/GCA_000327125.3_ASM32712v3	-	HC-65A1
Clostridioides difficile CD175	1151297	PRJNA85767	85767	Terrabacteria group	Firmicutes	3.9864	28.6	-	AVIB01	687	3757	3550	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766597	GCA_000449525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/525/GCA_000449525.2_ASM44952v2	-	CD175
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.80502	32.2	-	MRKM01	102	1893	1549	4/19/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773890	GCA_002100485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/485/GCA_002100485.1_ASM210048v1	28348839	FDC418
Brucella abortus NI240	1160163	PRJNA173556	173556	Proteobacteria	Alphaproteobacteria	3.28569	57.2	-	AQMK01	7	3376	3153	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811186	GCA_000365665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/665/GCA_000365665.1_Bruc_abor_NI240_V1	-	NI240
Staphylococcus aureus subsp. aureus	46170	PRJNA259557	259557	Terrabacteria group	Firmicutes	2.80634	32.8784	chromosome:NZ_CP009361.1/CP009361.1; plasmid pS1945:NZ_CP009362.1/CP009362.1	-	2	2894	2714	9/18/14	3/4/17	Complete Genome	NBACC	SAMN03009478	GCA_000756205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/205/GCA_000756205.1_ASM75620v1	25377701	ATCC 25923
Xanthomonas oryzae pv. oryzae	64187	PRJNA269461	269461	Proteobacteria	Gammaproteobacteria	4.39025	63.8	-	JXGF01	477	4399	3532	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252576	GCA_001928695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/695/GCA_001928695.1_ASM192869v1	-	IXO365
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.86006	38	-	MLMB01	225	1902	1672	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297041	GCA_001868345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/345/GCA_001868345.1_ASM186834v1	27118061	AWRIB326
Vibrio parahaemolyticus S172	1394704	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.05195	45.3	-	AWHI01	363	4829	4678	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02339018	GCA_000489055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/055/GCA_000489055.1_S172	-	S172
Bacillus subtilis	1423	PRJEB9876	290051	Terrabacteria group	Firmicutes	3.96229	43.8	-	CYHQ01	76	4049	3924	8/27/15	3/26/17	Contig	University of Liverpool	SAMEA3484410	GCA_001286885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/885/GCA_001286885.1_Bacillus_JRS11	-	-
Staphylococcus aureus subsp. aureus	46170	PRJNA378149	378149	Terrabacteria group	Firmicutes	2.80061	32.8783	chromosome:NZ_CP020020.1/CP020020.1; plasmid unnamed1:NZ_CP020021.1/CP020021.1	-	2	2908	2732	3/13/17	3/15/17	Complete Genome	FU Berlin	SAMN06480665	GCA_002025145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/145/GCA_002025145.1_ASM202514v1	-	ATCC 6538
Clostridium botulinum	1491	PRJNA257008	257008	Terrabacteria group	Firmicutes	3.88909	28	-	LHUL01	28	3775	3609	8/31/15	3/26/17	Contig	µFORGE	SAMN03862115	GCA_001276985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/985/GCA_001276985.1_CBOT009-SEQ-1-ASM-1	-	ATCC 25763
Enterococcus faecalis EnGen0081	1151202	PRJNA85655	85655	Terrabacteria group	Firmicutes	2.99289	37.3	-	AIJA01	8	3063	2917	5/3/13	4/10/17	Scaffold	Broad Institute	SAMN00792307	GCA_000390825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/825/GCA_000390825.1_Ente_faec_7330259-5_V1	-	7330259-5
Streptococcus mutans NLML8	857115	PRJNA49833	49833	Terrabacteria group	Firmicutes	1.96315	36.8	-	AHSV01	135	1931	1830	2/11/13	3/23/17	Contig	Cornell University	SAMN02429068	GCA_000339495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/495/GCA_000339495.1_ASM33949v1	23228887	NLML8
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14348	52.4	-	CQIP01	70	2520	2194	3/23/15	4/11/17	Contig	SC	SAMEA1690477	GCA_001103565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/565/GCA_001103565.1_8289_2_22	-	GCGS022
Enterococcus faecium EnGen0016	1138894	PRJNA82439	82439	Terrabacteria group	Firmicutes	3.25422	37.9	-	AHWV01	39	3278	3045	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779806	GCA_000321725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/725/GCA_000321725.1_Ente_faec_E1392_V1	-	E1392
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.59771	67.1	-	JVZQ01	255	4272	4104	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197148	GCA_001070325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/325/GCA_001070325.1_ASM107032v1	26230489	1189_SMAL
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15792	41.2	-	CWFI01	93	2090	1905	6/23/15	3/26/17	Contig	SC	SAMEA1032874	GCA_001176985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/985/GCA_001176985.1_6903_8_70	-	EQUI0215
Pasteurella multocida subsp. septica	115545	PRJNA355236	355236	Proteobacteria	Gammaproteobacteria	2.33519	40.3	-	MTEA01	14	2246	2159	3/8/17	3/11/17	Scaffold	INRA	SAMN06140939	GCA_002023845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/845/GCA_002023845.1_ASM202384v1	-	CIRMBP-0749
Lactobacillus rhamnosus	47715	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.9668	46.6	-	JVIZ01	391	2995	2722	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197581	GCA_001064785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/785/GCA_001064785.1_ASM106478v1	26230489	390_LRHA
Brucella melitensis F2/06-6	1160226	PRJNA173634	173634	Proteobacteria	Alphaproteobacteria	3.29761	57.2	-	AQNI01	15	3376	3147	4/16/13	4/1/17	Contig	Broad Institute	SAMN00811210	GCA_000366945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/945/GCA_000366945.1_Bruc_meli_F2_06-6_V1	-	F2/06-6
Staphylococcus aureus subsp. aureus DSM 20231	1241616	PRJNA283471	283471	Terrabacteria group	Firmicutes	2.78256	32.8783	chromosome:NZ_CP011526.1/CP011526.1; plasmid unnamed:NZ_CP011527.1/CP011527.1	-	2	2896	2755	6/3/15	3/4/17	Complete Genome	Okinawa Institute of Advanced Sciences	SAMN03651231	GCA_001027105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/105/GCA_001027105.1_ASM102710v1	26184947	DSM 20231
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.36419	53.4	-	LSWM01	38	2282	2129	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497010	GCA_002202675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/675/GCA_002202675.1_S70	-	4915
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.44944	47.3	-	CPZM01	112	4174	3939	3/23/15	3/26/17	Scaffold	SC	SAMEA980186	GCA_001151605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/605/GCA_001151605.1_4976_7_8	-	209-36/84
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.20639	59.5	-	JVHU01	37	4935	4777	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197612	GCA_001063375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/375/GCA_001063375.1_ASM106337v1	26230489	420_SMAR
Lactobacillus plantarum	1590	PRJNA314112	314112	Terrabacteria group	Firmicutes	3.32485	44.4	-	LUXI01	45	3230	3055	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04528932	GCA_001633765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/765/GCA_001633765.1_ASM163376v1	-	Nizo3892
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70789	31.3	-	CUTH01	18	1774	1687	3/31/15	3/18/17	Contig	SC	SAMEA1401278	GCA_001231465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/465/GCA_001231465.1_7213_3_25	-	OXC6568
Burkholderia sp. BT03	1144309	PRJEB19706	377498	Proteobacteria	Betaproteobacteria	11.0485	61.9	-	FUZW01	4	10092	9632	3/9/17	3/18/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06266956	GCA_900167965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/965/GCA_900167965.1_IMG-taxon_2711768613_annotated_assembly	-	BT03
Cutibacterium acnes	1747	PRJEB16126	348585	Terrabacteria group	Actinobacteria	2.54437	60	-	FNGJ01	13	2550	2406	10/20/16	4/5/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216478	GCA_900102845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/845/GCA_900102845.1_IMG-taxon_2654588184_annotated_assembly	-	NLAE-zl-G260
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.52374	32.6	-	CUFD01	97	2522	2387	3/31/15	3/26/17	Scaffold	SC	SAMEA1035062	GCA_001223605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/605/GCA_001223605.1_7068_7_10	-	6035
Enterobacter cloacae	550	PRJNA313000	313000	Proteobacteria	Gammaproteobacteria	4.57566	55.5	-	LUGN01	14	4456	4244	3/17/16	3/28/17	Contig	University of Calcutta	SAMN04532519	GCA_001593645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/593/645/GCA_001593645.1_ASM159364v1	27174279	S1:CND1
Cronobacter sakazakii 696	1208664	PRJEB155	181116	Proteobacteria	Gammaproteobacteria	4.98554	55.9	-	CALF01	569	5243	4025	11/15/12	5/18/17	Scaffold	LifeTech	SAMEA2272354	GCA_000316155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/155/GCA_000316155.1_ASM31615v1	23166675	696
Mycobacterium abscessus subsp. massiliense	1962118	PRJNA261046	261046	Terrabacteria group	Actinobacteria	4.89061	64.1	-	JRMG01	80	4943	4770	10/19/16	5/24/17	Contig	Institut Pasteur	SAMN03068290	GCA_001792625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/625/GCA_001792625.1_ASM179262v1	26884275	CIP 108297
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.49924	67.2	-	LPBZ01	171	6820	6407	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449388	GCA_001528265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/265/GCA_001528265.1_ASM152826v1	-	MSMB2010WGS
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.14762	38.7	-	NGDK01	54	4079	3897	5/15/17	5/23/17	Contig	JCVI	SAMN06837764	GCA_002137415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/415/GCA_002137415.1_ASM213741v1	-	PR320
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA271006	271006	Proteobacteria	Gammaproteobacteria	5.24346	55.1	-	JZLD01	142	5209	4943	3/30/15	3/26/17	Contig	JCVI	SAMN03277206	GCA_000965985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/985/GCA_000965985.1_ASM96598v1	-	CIDEIMsCOL19
Klebsiella aerogenes	548	PRJNA361572	361572	Proteobacteria	Gammaproteobacteria	5.21882	54.8	-	MTLB01	94	5172	4908	1/30/17	4/17/17	Contig	CONICET-CINDEFI- La Plata	SAMN06234924	GCA_001974865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/974/865/GCA_001974865.1_ASM197486v1	-	B
Pseudomonas sp. HMSC75E02	1608908	PRJNA274560	274560	Proteobacteria	Gammaproteobacteria	6.88643	66.9	-	LTNB01	344	6294	5831	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498893	GCA_001838695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/695/GCA_001838695.1_ASM183869v1	-	HMSC75E02
Streptomyces sp. Root1295	1736448	PRJNA297942	297942	Terrabacteria group	Actinobacteria	9.19664	71.5	-	LMEL01	24	8154	7733	11/2/15	3/12/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155717	GCA_001426325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/325/GCA_001426325.1_Root1295	26633631	Root1295
Bacillus sp. LL01	1665556	PRJNA286144	286144	Terrabacteria group	Firmicutes	5.80237	41.2	-	LFEL01	290	6026	5546	6/22/15	4/10/17	Contig	University of North Texas	SAMN03765409	GCA_001037965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/965/GCA_001037965.1_Bacillus_LL01_1.0	26294639	LL01
Acinetobacter sp. 883425	1310773	PRJNA194849	194849	Proteobacteria	Gammaproteobacteria	4.03783	38.8	-	JFXZ01	62	3921	3629	3/11/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02415077	GCA_000588395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/395/GCA_000588395.1_ASM58839v1	-	883425
Clostridium sp. CAG:433	1262806	PRJEB878	206813	Terrabacteria group	Firmicutes	1.34741	25	-	CBGV01	41	1341	1308	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138571	GCA_000433675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/675/GCA_000433675.1_MGS433	-	-
Sphingomonas sp. JS21-1	1855283	PRJEB16821	350977	Proteobacteria	Alphaproteobacteria	3.2729	67.3	-	FNZZ01	11	3153	3060	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216382	GCA_900109565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/565/GCA_900109565.1_IMG-taxon_2657245271_annotated_assembly	-	JS21-1
Rhodococcus sp. 05-339-2	2022506	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.73166	64.8	-	NOYW01	22	5446	5299	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376376	GCA_002258965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/965/GCA_002258965.1_ASM225896v1	-	05-339-2
Enterobacter cloacae complex sp. GN03842	1870954	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.67886	56	-	LRCL01	124	4518	4253	1/19/16	4/11/17	Contig	JCVI	SAMN04407782	GCA_001518315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/315/GCA_001518315.1_ASM151831v1	-	GN03842
Staphylococcus sp. HMSC058E03	1715054	PRJNA296182	296182	Terrabacteria group	Firmicutes	2.53818	33.6	-	LTQW01	42	2413	2327	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498583	GCA_001836475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/475/GCA_001836475.1_ASM183647v1	-	HMSC058E03
Corynebacterium sp. HMSC073B01	1739353	PRJNA300003	300003	Terrabacteria group	Actinobacteria	2.48204	58.8	-	LTNS01	57	2180	2102	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498680	GCA_001838255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/255/GCA_001838255.1_ASM183825v1	-	HMSC073B01
Streptococcus sp. AS14	936577	PRJNA78579	78579	Terrabacteria group	Firmicutes	2.33149	43.1	-	ALKI01	19	2352	2236	8/10/12	4/17/17	Contig	J. Craig Venter Institute	SAMN00828791	GCA_000286495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/495/GCA_000286495.1_SspAS14v1.0	-	AS14
Mycobacterium sp. 852002-51971_SCH5477799-a	1834106	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.03363	66.8	-	LZIF01	129	4716	4492	6/17/16	4/13/17	Contig	JCVI	SAMN04691956	GCA_001667145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/145/GCA_001667145.1_ASM166714v1	-	852002-51971_SCH5477799-a
Paenibacillus sp. FJAT-26967	1729690	PRJNA299750	299750	Terrabacteria group	Firmicutes	5.45798	49.5	-	LMXH01	18	4846	4656	1/26/16	4/17/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04102797	GCA_001541095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/095/GCA_001541095.1_ASM154109v1	-	FJAT-26967
Prochlorococcus sp. scB241_527L22	1471450	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.51774	31.3	-	JFLA01	206	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671321	GCA_000635355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/355/GCA_000635355.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Rhizobium sp. NFIX01	1566266	PRJEB17010	351159	Proteobacteria	Alphaproteobacteria	5.60532	59.1	-	FOGA01	35	5516	5272	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159504	GCA_900111085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/085/GCA_900111085.1_IMG-taxon_2600255279_annotated_assembly	-	NFIX01
Klebsiella quasipneumoniae	1463165	PRJNA319366	319366	Proteobacteria	Gammaproteobacteria	6.80202	52.2	-	MIZZ01	2301	-	-	9/24/16	9/24/16	Contig	"Jet Propulsion Laboratory, California Institute of Technology"	SAMN04902364	GCA_001743455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/743/455/GCA_001743455.1_ASM174345v1	-	IF3SW-P1
Staphylococcus argenteus	985002	PRJEB20633	390605	Terrabacteria group	Firmicutes	2.7395	32.2	-	FXVX01	197	2713	2503	6/15/17	7/5/17	Scaffold	Geogentics	SAMEA104034170	GCA_900183875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/875/GCA_900183875.1_M4148	-	-
Staphylococcus argenteus	985002	PRJEB20633	390605	Terrabacteria group	Firmicutes	2.7899	32.3	-	FXVO01	100	2783	2596	6/15/17	7/5/17	Scaffold	Geogentics	SAMEA104034160	GCA_900183895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/895/GCA_900183895.1_O-5	-	-
Rhizobium sp. JGI 0001003-J22	1268320	PRJNA183554	183554	Proteobacteria	Alphaproteobacteria	1.14399	60.9	-	AXYM01	83	-	-	10/25/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441088	GCA_000483325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/325/GCA_000483325.1_ASM48332v1	-	JGI 0001003-J22
Prochlorococcus sp. scB241_527P5	1471452	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.46489	31.3	-	JFLC01	324	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671323	GCA_000635375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/375/GCA_000635375.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Paenibacillus sp. O199	1643925	PRJNA289478	289478	Terrabacteria group	Firmicutes	7.17694	45.7	-	LGRP01	119	6503	6282	4/29/16	8/28/17	Scaffold	Institute of Microbiology of the ASCR	SAMN03854069	GCA_001636635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/635/GCA_001636635.1_ASM163663v1	27186238	O199
Mycobacterium sp. 852002-53434_SCH5985345	1834107	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.38576	67.7	-	LZIE01	98	5084	4902	6/17/16	4/13/17	Contig	JCVI	SAMN04691965	GCA_001667155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/155/GCA_001667155.1_ASM166715v1	-	852002-53434_SCH5985345
Streptococcus sp. GMD1S	1169670	PRJNA157411	157411	Terrabacteria group	Firmicutes	2.09901	40.6	-	AJQY01	480	2199	1937	9/14/12	4/7/17	Contig	Los Alamos National Laboratory	SAMN02470271	GCA_000296875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/875/GCA_000296875.1_ASM29687v1	23493677	GMD1S
Corynebacterium sp. HMSC074C03	1739351	PRJNA300001	300001	Terrabacteria group	Actinobacteria	2.54094	58.7	-	LTNR01	73	2238	2132	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498679	GCA_001838285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/285/GCA_001838285.1_ASM183828v1	-	HMSC074C03
Staphylococcus sp. HMSC058E12	1715026	PRJNA296153	296153	Terrabacteria group	Firmicutes	2.59816	31.8	-	LTQV01	92	2577	2452	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498569	GCA_001836495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/495/GCA_001836495.1_ASM183649v1	-	HMSC058E12
Enterobacter cloacae complex sp. GN05729	1870956	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.61934	56.2	-	LRCV01	38	4439	4287	1/19/16	4/11/17	Contig	JCVI	SAMN04407792	GCA_001518395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/395/GCA_001518395.1_ASM151839v1	-	GN05729
Rhodococcus sp. 05-2256-B4	2022491	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.76908	64.4	-	NOYX01	62	5485	5316	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376361	GCA_002258975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/975/GCA_002258975.1_ASM225897v1	-	05-2256-B4
Sphingomonas sp. JGI 0001002-C18	1094941	PRJNA176079	176079	Proteobacteria	Alphaproteobacteria	0.651875	64.7	-	ATTZ02	53	-	-	7/9/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440915	GCA_000419945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/945/GCA_000419945.2_ASM41994v2	-	JGI 0001002-C18
Clostridium sp. CAG:167	1262777	PRJEB736	206581	Terrabacteria group	Firmicutes	2.16736	44.1	-	CBAV01	105	2015	1994	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138574	GCA_000433735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/735/GCA_000433735.1_MGS167	-	-
Acinetobacter sp. 225588	1310788	PRJNA194864	194864	Proteobacteria	Gammaproteobacteria	3.95612	38.8	-	JFXV01	68	3893	3622	3/11/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02415064	GCA_000588415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/415/GCA_000588415.1_ASM58841v1	-	225588
Bacillus sp. LK7	1628209	PRJNA277399	277399	Terrabacteria group	Firmicutes	4.00381	46.4	-	LDUN01	52	4051	3866	6/30/15	4/10/17	Contig	University of Malaya	SAMN03392477	GCA_001043515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/515/GCA_001043515.1_ASM104351v1	-	LK7
Streptomyces sp. Root1304	1736450	PRJNA297942	297942	Terrabacteria group	Actinobacteria	7.58403	72.4	-	LMEP01	28	6827	6528	11/2/15	3/12/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155719	GCA_001426405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/405/GCA_001426405.1_Root1304	26633631	Root1304
Pseudomonas sp. S9	686578	PRJNA66201	66201	Proteobacteria	Gammaproteobacteria	4.79653	56.5	-	AFFX01	25	4492	4275	7/29/11	5/19/17	Contig	"Key Laboratory of Marine Biogenetic Resources, Third Institute of Oceanography, State Oceanic Administration (SOA), PR China"	SAMN02470122	GCA_000222125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/125/GCA_000222125.2_ASM22212v2	21622758	S9
Klebsiella aerogenes	548	PRJNA362990	362990	Proteobacteria	Gammaproteobacteria	6.07629	54.3	-	MTZP01	1322	6138	5335	2/17/17	4/18/17	Contig	University of Sao Paulo	SAMN06251597	GCA_002003705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/003/705/GCA_002003705.1_ASM200370v1	-	LIM107
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA271006	271006	Proteobacteria	Gammaproteobacteria	5.28723	55.1	-	JZKQ01	155	5267	5006	3/30/15	3/26/17	Contig	JCVI	SAMN03277193	GCA_000966045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/045/GCA_000966045.1_ASM96604v1	-	CIDEIMsCOL6
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.01269	38.7	-	NGDT01	92	3936	3729	5/15/17	5/23/17	Contig	JCVI	SAMN06837755	GCA_002137615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/615/GCA_002137615.1_ASM213761v1	-	PR330
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.46383	67.5	-	LPCA01	94	6781	6453	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449389	GCA_001528285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/285/GCA_001528285.1_ASM152828v1	-	MSMB2011WGS
Mycobacterium abscessus	36809	PRJNA261046	261046	Terrabacteria group	Actinobacteria	4.84748	64.1	-	JRMD01	384	5043	4607	10/19/16	3/20/17	Contig	Institut Pasteur	SAMN03068287	GCA_001792635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/635/GCA_001792635.1_ASM179263v1	26884275	23
Cronobacter sakazakii 701	1208663	PRJEB156	181117	Proteobacteria	Gammaproteobacteria	4.85045	55.8	-	CALE01	768	5171	3868	11/15/12	5/18/17	Scaffold	LifeTech	SAMEA2272479	GCA_000319595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/595/GCA_000319595.1_ASM31959v1	23166675	701
Enterobacter cloacae subsp. dissolvens	69219	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.87608	55	-	LVTZ01	108	4784	4475	4/25/16	3/28/17	Contig	JCVI	SAMN04572598	GCA_001631195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/195/GCA_001631195.1_ASM163119v1	-	GN05306
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.41524	32.7	-	CUEL01	76	2363	2255	3/31/15	3/26/17	Scaffold	SC	SAMEA1035032	GCA_001224145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/145/GCA_001224145.1_7067_4_76	-	6_13
Cutibacterium acnes	1747	PRJNA267549	267549	Terrabacteria group	Actinobacteria	2.54075	60.2	-	JVDS01	9	2544	2363	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197718	GCA_001063605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/605/GCA_001063605.1_ASM106360v1	26230489	523_PAVI
Burkholderia sp. CF099	1882791	PRJEB19716	377497	Proteobacteria	Betaproteobacteria	10.3596	62	-	FUZY01	3	9405	9040	3/9/17	3/18/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05445504	GCA_900168075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/075/GCA_900168075.1_IMG-taxon_2711768633_annotated_assembly	-	CF099
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.6987	31.3	-	CUKW01	25	1767	1676	3/31/15	3/18/17	Contig	SC	SAMEA1010575	GCA_001231485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/485/GCA_001231485.1_7038_3_87	-	OXC6337
Lactobacillus plantarum	1590	PRJNA314118	314118	Terrabacteria group	Firmicutes	3.45466	44.2	-	LUXN01	44	3417	3024	4/28/16	4/10/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04528997	GCA_001633775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/775/GCA_001633775.1_ASM163377v1	-	NAB1
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.12282	59.8	-	JVMV01	54	4877	4749	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197481	GCA_001064335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/335/GCA_001064335.1_ASM106433v1	26230489	287_SMAR
Yersinia enterocolitica	630	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	4.59463	46.8	-	CPYG01	159	4401	3932	3/22/15	3/26/17	Scaffold	SC	SAMEA1486408	GCA_001160045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/045/GCA_001160045.1_8016_2_85	-	IP06077
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.40565	53.6	-	LSWK01	54	2319	2121	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496982	GCA_002202685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/685/GCA_002202685.1_S68	-	1054
Staphylococcus aureus	1280	PRJEB12552	360709	Terrabacteria group	Firmicutes	2.86639	32.8715	chromosome 1:LT699704.1; plasmid 2:LT699705.1	-	2	-	-	1/11/17	1/11/17	Complete Genome	UNIVERSITY OF MELBOURNE	SAMEA36497668	GCA_900155335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/335/GCA_900155335.1_NZ15MR0322	-	NZ15MR0322
Brucella melitensis F3/02	1160210	PRJNA173599	173599	Proteobacteria	Alphaproteobacteria	3.29001	57.2	-	AQNJ01	12	3370	3143	4/16/13	4/1/17	Contig	Broad Institute	SAMN00811211	GCA_000366965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/965/GCA_000366965.1_Bruc_meli_F3_02_V1	-	F3/02
Lactobacillus rhamnosus	47715	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.01612	46.8	-	JVCX01	77	3010	2823	7/10/15	4/3/17	Scaffold	University of Washington	SAMN03197739	GCA_001065365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/365/GCA_001065365.1_ASM106536v1	26230489	541_LRHA
Pasteurella multocida subsp. septica	115545	PRJNA355236	355236	Proteobacteria	Gammaproteobacteria	2.27027	40.2	-	MTED01	11	2163	2072	3/8/17	3/11/17	Scaffold	INRA	SAMN06140942	GCA_002023885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/885/GCA_002023885.1_ASM202388v1	-	CIRMBP-0782
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12678	41.2	-	CWDB01	78	2053	1875	6/23/15	3/26/17	Contig	SC	SAMEA1032875	GCA_001177005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/005/GCA_001177005.1_6903_6_23	-	EQUI0168
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.84412	66.1	-	JVNZ01	322	4588	4282	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197451	GCA_001070785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/785/GCA_001070785.1_ASM107078v1	26230489	259_SMAL
Enterococcus faecium EnGen0021	1138895	PRJNA82441	82441	Terrabacteria group	Firmicutes	2.62573	38.3	-	AHWW01	6	2642	2421	12/17/12	4/10/17	Scaffold	Broad Institute	SAMN00779807	GCA_000321745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/745/GCA_000321745.1_Ente_faec_E1552_V1	-	E1552
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.15272	52.4	-	CQJL01	78	2529	2210	3/23/15	4/11/17	Contig	SC	SAMEA1690372	GCA_001103845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/845/GCA_001103845.1_8289_2_4	-	GCGS004
Streptococcus mutans 14D	857113	PRJNA49837	49837	Terrabacteria group	Firmicutes	1.9691	36.7	-	AHSY01	102	1949	1864	2/11/13	3/23/17	Contig	Cornell University	SAMN02429069	GCA_000339515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/515/GCA_000339515.1_ASM33951v1	23228887	14D
Enterococcus faecalis EnGen0082	1151204	PRJNA85659	85659	Terrabacteria group	Firmicutes	2.91098	37.5	-	AIJC01	7	2939	2778	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00792309	GCA_000390845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/845/GCA_000390845.1_Ente_faec_7330948-5_V1	-	7330948-5
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.95949	27.9	-	LFOK01	71	3805	3595	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779956	GCA_001573175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/175/GCA_001573175.1_10148	26939550	CDC 1744
Staphylococcus aureus subsp. aureus 11819-97	1123523	PRJNA78269	78269	Terrabacteria group	Firmicutes	2.86886	32.8704	chromosome:NC_017351.1/CP003194.1; plasmid p11819-97:NC_017350.1/CP003193.1	-	2	2986	2821	12/21/11	3/2/17	Complete Genome	Statens Serum Institut	SAMN02603886	GCA_000239235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/235/GCA_000239235.1_ASM23923v1	22374956	11819-97
Bacillus subtilis	1423	PRJNA311497	311497	Terrabacteria group	Firmicutes	4.25436	43.5	-	LSMU01	92	4402	4188	2/23/16	7/7/17	Contig	Universite d'Auvergne	SAMN04482511	GCA_001566945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/945/GCA_001566945.1_ASM156694v1	27081138	HUK15
Vibrio parahaemolyticus S171	1394703	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.14655	45.2	-	AWHJ01	342	4834	4646	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02339017	GCA_000489075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/075/GCA_000489075.1_S171	-	S171
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.91618	37.7	-	MLMC01	260	1965	1725	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297042	GCA_001868355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/355/GCA_001868355.1_ASM186835v1	27118061	AWRIB327
Xanthomonas oryzae pv. oryzae	64187	PRJNA269462	269462	Proteobacteria	Gammaproteobacteria	4.25407	63.9	-	JXGG01	420	4251	3426	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252557	GCA_001928745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/745/GCA_001928745.1_ASM192874v1	-	IXO367
Xanthomonas citri pv. bilvae	487854	PRJEB7165	268810	Proteobacteria	Gammaproteobacteria	4.99044	64.6	-	CDHI01	60	4639	4530	11/28/14	1/9/16	Scaffold	Genoscope CEA	SAMEA3121378	GCA_001497855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/855/GCA_001497855.1_AWS_PRJEB7165_v1	-	NCPPB 3213
Brucella abortus NI388	1160167	PRJNA173561	173561	Proteobacteria	Alphaproteobacteria	3.28741	57.2	-	AQMN01	3	3379	3154	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811190	GCA_000365685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/685/GCA_000365685.1_Bruc_abor_NI388_V1	-	NI388
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.82083	32.3	-	MRKK01	111	1902	1546	4/19/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773892	GCA_002100505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/505/GCA_002100505.1_ASM210050v1	28348839	FDC420
Clostridioides difficile CD178	1151298	PRJNA85769	85769	Terrabacteria group	Firmicutes	4.00992	28.5	-	AVIC01	121	3717	3565	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766598	GCA_000449545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/545/GCA_000449545.2_ASM44954v2	-	CD178
Vibrio cholerae HC-67A1	991982	PRJNA63971	63971	Proteobacteria	Gammaproteobacteria	4.02675	47.5	-	AGUV02	95	3827	3679	12/10/12	3/23/17	Scaffold	Institute for Genome Sciences	SAMN00262235	GCA_000327145.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/145/GCA_000327145.3_ASM32714v3	-	HC-67A1
Bacillus thuringiensis serovar galleriae	29338	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.36693	35.2	-	NFDR01	215	6778	6206	5/17/17	6/15/17	Contig	Huazhong Agricultural University	SAMN05934541	GCA_002147105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/105/GCA_002147105.1_ASM214710v1	-	BGSC 4G1
Chlamydia trachomatis 6276s	564417	PRJNA32185	32185	PVC group	Chlamydiae	1.04318	41.3	chromosome:NZ_ABYE01000001.1/ABYE01000001.1	ABYE01	1	965	902	1/30/09	3/22/17	Chromosome	Oregon State University	SAMN02470781	GCA_000173495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/495/GCA_000173495.1_ASM17349v1	-	-
Burkholderia pseudomallei	28450	PRJNA244249	244249	Proteobacteria	Betaproteobacteria	7.36378	67.9	-	JOTS01	2	7603	7003	9/23/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02863412	GCA_000757105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/105/GCA_000757105.1_BDT	25414490	BDT
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.40753	66.6	-	MUTK01	117	7953	7584	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001910	GCA_001992385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/385/GCA_001992385.1_ASM199238v1	-	VC15305
Bacteroides fragilis	817	PRJNA341407	341407	FCB group	Bacteroidetes/Chlorobi group	5.2108	43.1	-	MTGH01	58	4620	4393	2/13/17	2/22/17	Scaffold	California Department of Public Health	SAMN05721783	GCA_001997325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/325/GCA_001997325.1_ASM199732v1	-	ATCC 25285
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.93452	50.6	-	NQCS01	148	5207	4764	8/11/17	8/15/17	Contig	JCVI	SAMN07450609	GCA_002248015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/015/GCA_002248015.1_ASM224801v1	-	ECCTRSRTH10
Legionella pneumophila	446	PRJNA281275	281275	Proteobacteria	Gammaproteobacteria	3.54306	38.2	-	LBAM01	35	3249	3080	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03486852	GCA_001582625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/625/GCA_001582625.1_ASM158262v1	26888563	FS_4_1103abu
Pseudomonas syringae pv. syringae PD2766	716918	PRJNA296737	296737	Proteobacteria	Gammaproteobacteria	5.46908	59	-	LKEM01	105	5023	4743	12/15/15	3/27/17	Contig	New Zealand Institute for Plant & Food research	SAMN04102822	GCA_001466965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/965/GCA_001466965.1_ASM146696v1	27056212	PD2766
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.13884	41	-	CEKH01	178	2169	2021	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233977	GCA_000935945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/945/GCA_000935945.1_Velvet_assembly	-	S10W
Streptococcus agalactiae CCUG 37738	1154812	PRJNA86229	86229	Terrabacteria group	Firmicutes	2.1659	35.3	-	ALQP01	31	2219	2098	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991109	GCA_000288775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/775/GCA_000288775.1_ASM28877v1	-	CCUG 37738
Acinetobacter baumannii NIPH 80	1217629	PRJNA183251	183251	Proteobacteria	Gammaproteobacteria	4.06865	39.3	-	APRE01	9	3950	3657	4/16/13	3/15/17	Scaffold	Broad Institute	SAMN01828142	GCA_000369345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/345/GCA_000369345.1_Acin_baum_NIPH_80_V1	-	NIPH 80
Pseudomonas aeruginosa LESlike4	1408275	PRJNA222521	222521	Proteobacteria	Gammaproteobacteria	6.52405	66.4	chromosome:NZ_CP006985.1/CP006985.1	-	1	6211	6046	3/3/14	3/16/17	Chromosome	"IBIS, University Laval"	SAMN03081520	GCA_000583995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/995/GCA_000583995.1_ASM58399v1	-	LESlike4
Shigella flexneri Shi06HN023	1434134	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.44106	50.4	-	AZOM01	299	4951	4251	1/29/14	2/23/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437369	GCA_000565625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/625/GCA_000565625.1_ASM56562v1	24452172	Shi06HN023
Bacillus anthracis	1392	PRJNA325380	325380	Terrabacteria group	Firmicutes	5.40601	35.1	-	LZQW01	108	5863	5553	11/18/16	3/28/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05230456	GCA_001883895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/895/GCA_001883895.1_ASM188389v1	-	L19
Leptospira interrogans serovar Copenhageni str. Fiocruz LV3213	1291339	PRJNA189006	189006	Spirochaetes	Spirochaetia	4.63296	35	-	AOVK01	165	4136	3761	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920619	GCA_000343695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/695/GCA_000343695.1_CA_glsol143	-	Fiocruz LV3213
Streptococcus pyogenes ABC020046470	1439144	PRJNA233167	233167	Terrabacteria group	Firmicutes	1.83228	38.5	-	JJGR01	2	1881	1756	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567516	GCA_000630485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/485/GCA_000630485.1_Stre_pyog_ABC020046470_V1	-	ABC020046470
Neisseria meningitidis	487	PRJNA244856	244856	Proteobacteria	Betaproteobacteria	2.14805	51.5	-	JMDF01	92	2479	2116	7/20/15	3/21/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02729282	GCA_001183405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/405/GCA_001183405.1_Nm100530	25989189	100530
Helicobacter pylori	210	PRJDB4296	362565	Proteobacteria	delta/epsilon subdivisions	1.62576	38.8	chromosome:AP017350.1	-	1	1598	1560	1/18/17	1/18/17	Chromosome	"Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture"	SAMD00042479	GCA_002357695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/695/GCA_002357695.1_ASM235769v1	-	F72
Streptococcus pneumoniae GA04375	760746	PRJNA48649	48649	Terrabacteria group	Firmicutes	2.0614	39.9	-	AFAX01	9	2236	1934	4/1/11	3/9/17	Contig	Institute for Genome Sciences	SAMN00792717	GCA_000194885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/885/GCA_000194885.2_ASM19488v2	-	GA04375
Staphylococcus aureus subsp. aureus ST228	1074919	PRJEA71357	71357	Terrabacteria group	Firmicutes	2.78309	32.8693	chromosome:NC_020568.1/HE579073.1; plasmid pI8T7:NC_020539.1/HE579074.1	-	2	2872	2701	10/5/12	3/2/17	Complete Genome	Swiss Institute of Bioinformatics - Vital-IT group	SAMEA2272502	GCA_000383005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/383/005/GCA_000383005.1_ASM38300v1	22720005	ST228
Mycobacterium tuberculosis KZN 4207	478433	PRJNA39761	39761	Terrabacteria group	Actinobacteria	4.39737	65.5499	chromosome:NZ_CM000787.2/CM000787.2	ACVS02	1	4297	4102	10/13/09	5/18/17	Chromosome	Texas A&M University	SAMN02471107	GCA_000162975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/975/GCA_000162975.1_ASM16297v1	19890396	KZN 4207
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.83016	38	-	FFJD01	20	1851	1700	2/9/16	3/27/17	Scaffold	SC	SAMEA2674747	GCA_900022525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/525/GCA_900022525.1_14412_4_30	-	2842STDY5882058
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.38959	68.9	-	BDNV01	327	5120	4796	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076673	GCA_002089635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/635/GCA_002089635.1_ASM208963v1	28045086	Kin-28
Lactococcus lactis subsp. cremoris TIFN6	1234876	PRJNA175674	175674	Terrabacteria group	Firmicutes	2.59151	35.7	-	ATBB01	748	2669	2334	8/19/13	1/8/14	Contig	Top Institute Food and Nutrition	SAMN02472110	GCA_000447845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/845/GCA_000447845.1_LLT6.01	23823494	TIFN6
Bacillus cereus VD014	1053223	PRJNA70413	70413	Terrabacteria group	Firmicutes	6.20418	34.8	-	AHER01	4	6415	5931	8/15/12	5/18/17	Scaffold	Broad Institute	SAMN02596855	GCA_000291255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/255/GCA_000291255.1_Baci_cere_VD014_V1	-	VD014
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.57465	31.9	-	JWEH01	131	2556	2463	7/10/15	3/26/17	Contig	University of Washington	SAMN03197027	GCA_001070075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/075/GCA_001070075.1_ASM107007v1	26230489	1063_SEPI
Staphylococcus aureus subsp. aureus ST228	1074919	PRJEA71355	71355	Terrabacteria group	Firmicutes	2.78302	32.8693	chromosome:NC_020537.1/HE579071.1; plasmid pI7S6:NC_020538.1/HE579072.1	-	2	2872	2698	10/5/12	3/4/17	Complete Genome	Swiss Institute of Bioinformatics - Vital-IT group	SAMEA3283125	GCA_000967405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/405/GCA_000967405.1_ASM96740v1	22720005	ST228
Pseudomonas fluorescens	294	PRJNA339171	339171	Proteobacteria	Gammaproteobacteria	6.13553	60.5	-	MSDG01	57	5697	5495	3/7/17	3/10/17	Scaffold	USDA	SAMN05589718	GCA_002022255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/255/GCA_002022255.1_ASM202225v1	-	TDH40
Yersinia pestis biovar Orientalis str. AS200902147	1084232	PRJNA73109	73109	Proteobacteria	Gammaproteobacteria	4.59268	47.5	-	AGJY01	277	4352	3993	3/22/12	5/19/17	Contig	US Army Edgewood Chemical Biological Center	SAMN01831187	GCA_000255855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/855/GCA_000255855.1_ASM25585v1	22359605	AS200902147
Staphylococcus aureus	1280	PRJNA321478	321478	Terrabacteria group	Firmicutes	2.83344	32.8688	chromosome:NZ_CP015817.1/CP015817.1; plasmid unnamed:NZ_CP015818.1/CP015818.1	-	2	2941	2762	5/16/17	5/24/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN04995068	GCA_002140115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/115/GCA_002140115.1_ASM214011v1	-	FORC_039
Staphylococcus aureus subsp. aureus MSSA476	282459	PRJNA266	266	Terrabacteria group	Firmicutes	2.82045	32.867	chromosome:NC_002953.3/BX571857.1; plasmid pSAS:NC_005951.1/BX571858.1	-	2	2935	2770	11/6/01	3/2/17	Complete Genome	Sanger Institute	SAMEA1705922	GCA_000011525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/525/GCA_000011525.1_ASM1152v1	15213324	MSSA476
Staphylococcus aureus	1280	PRJNA246311	246311	Terrabacteria group	Firmicutes	2.91655	32.8664	chromosome:NZ_CP007670.1/CP007670.1; plasmid pM121:NZ_CP007671.1/CP007671.1	-	2	3092	2927	6/8/15	3/4/17	Complete Genome	Universidad El Bosque	SAMN02746692	GCA_001021875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/875/GCA_001021875.1_ASM102187v1	-	M121
Staphylococcus aureus	1280	PRJNA298722	298722	Terrabacteria group	Firmicutes	2.74688	32.8662	chromosome:NZ_CP012972.1/CP012972.1; plasmid pST20130938:NZ_CP012973.1/CP012973.1	-	2	2847	2682	4/5/16	3/6/17	Complete Genome	LNCC	SAMN04166246	GCA_001611405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/405/GCA_001611405.1_ASM161140v1	26918656	ST20130938
Staphylococcus aureus	1280	PRJNA298748	298748	Terrabacteria group	Firmicutes	2.74683	32.8662	chromosome:NZ_CP012970.1/CP012970.1; plasmid pST20130939:NZ_CP012971.1/CP012971.1	-	2	2844	2677	4/5/16	3/6/17	Complete Genome	LNCC	SAMN04166389	GCA_001611425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/425/GCA_001611425.1_ASM161142v1	26918656	ST20130939
Staphylococcus aureus subsp. aureus JH9	359786	PRJNA15757	15757	Terrabacteria group	Firmicutes	2.93713	32.8658	chromosome:NC_009487.1/CP000703.1; plasmid pSJH901:NC_009477.1/CP000704.1	-	2	3095	2931	5/18/07	3/2/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598343	GCA_000016805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/805/GCA_000016805.1_ASM1680v1	-	JH9
Yersinia pestis biovar Orientalis str. AS200901434	1084233	PRJNA73111	73111	Proteobacteria	Gammaproteobacteria	4.57298	47.5	-	AGJZ01	237	4332	4067	3/22/12	5/19/17	Contig	US Army Edgewood Chemical Biological Center	SAMN01831180	GCA_000255875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/875/GCA_000255875.1_ASM25587v1	22359605	AS200901434
Pseudomonas fluorescens	294	PRJNA339171	339171	Proteobacteria	Gammaproteobacteria	6.39177	60.5	-	MSDE01	40	5903	5713	3/7/17	3/11/17	Scaffold	USDA	SAMN05589716	GCA_002022265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/265/GCA_002022265.1_ASM202226v1	-	AH4
Staphylococcus aureus	1280	PRJNA298753	298753	Terrabacteria group	Firmicutes	2.70036	32.8655	chromosome:NZ_CP012979.1/CP012979.1; plasmid pST20130940:NZ_CP012980.1/CP012980.1	-	2	2774	2606	4/5/16	3/6/17	Complete Genome	LNCC	SAMN04166494	GCA_001611325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/325/GCA_001611325.1_ASM161132v1	26918656	ST20130940
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.44023	32	-	JWDB01	127	2369	2283	7/10/15	3/26/17	Contig	University of Washington	SAMN03197059	GCA_001070155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/155/GCA_001070155.1_ASM107015v1	26230489	1097_SEPI
Bacillus cereus MSX-D12	1053222	PRJNA70411	70411	Terrabacteria group	Firmicutes	5.61567	35.3	-	AHEQ01	7	6012	5670	8/15/12	5/18/17	Scaffold	Broad Institute	SAMN02596854	GCA_000291275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/275/GCA_000291275.1_Baci_cere_MSX-D12_V1	-	MSX-D12
Lactococcus lactis subsp. cremoris TIFN3	1234873	PRJNA175671	175671	Terrabacteria group	Firmicutes	2.72521	35.5	-	ATBE01	412	3096	2891	8/19/13	1/8/14	Contig	Top Institute Food and Nutrition	SAMN02472107	GCA_000447925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/925/GCA_000447925.1_LLT3.01	23823494	TIFN3
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.45299	68.8	-	BDNW01	486	5307	4872	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076674	GCA_002089655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/655/GCA_002089655.1_ASM208965v1	28045086	MK20-1
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.81618	38	-	FFIC01	10	1831	1706	2/9/16	3/27/17	Scaffold	SC	SAMEA2674714	GCA_900026975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/975/GCA_900026975.1_14412_4_8	-	2842STDY5882036
Mycobacterium tuberculosis KZN V2475	663887	PRJNA39765	39765	Terrabacteria group	Actinobacteria	4.39724	65.3995	chromosome:NZ_CM000788.2/CM000788.2	ACVT02	1	4317	4105	10/13/09	5/19/17	Chromosome	Texas A&M University	SAMN02471090	GCA_000162995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/995/GCA_000162995.1_ASM16299v1	19890396	KZN V2475
Staphylococcus aureus subsp. aureus Mu50	158878	PRJNA263	263	Terrabacteria group	Firmicutes	2.90364	32.8654	chromosome:NC_002758.2/BA000017.4; plasmid VRSAp:NC_002774.1/AP003367.1	-	2	3038	2868	10/4/01	3/2/17	Complete Genome	Juntendo Univ.	SAMD00061098	GCA_000009665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/665/GCA_000009665.1_ASM966v1	"1,141,814,615,141,940"	Mu50
Streptococcus pneumoniae 07AR0125	1001745	PRJNA64979	64979	Terrabacteria group	Firmicutes	2.02403	39.6	-	AFBY01	346	2211	1977	4/11/11	3/9/17	Contig	Yale University	SAMN02472135	GCA_000203715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/203/715/GCA_000203715.2_ASM20371v2	21551297	07AR0125
Helicobacter pylori	210	PRJDB4296	362565	Proteobacteria	delta/epsilon subdivisions	1.62713	38.7	chromosome:AP017351.1	-	1	1625	1595	1/18/17	1/18/17	Chromosome	"Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture"	SAMD00042480	GCA_002357715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/715/GCA_002357715.1_ASM235771v1	-	F75
Neisseria meningitidis	487	PRJNA244890	244890	Proteobacteria	Betaproteobacteria	2.15649	51.5	-	JMDG01	92	2489	2122	7/20/15	3/17/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02729511	GCA_001183415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/415/GCA_001183415.1_Nm321114	25989189	321114
Streptococcus pyogenes ABC020046264	1439141	PRJNA233166	233166	Terrabacteria group	Firmicutes	1.8283	38.5	-	JJGS01	4	1865	1733	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567515	GCA_000630505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/505/GCA_000630505.1_Stre_pyog_ABC020046264_V1	-	ABC020046264
Leptospira interrogans serovar Copenhageni str. Fiocruz LV4212	1291340	PRJNA189007	189007	Spirochaetes	Spirochaetia	4.61974	35	-	AOVJ01	147	4129	3759	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920587	GCA_000343715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/715/GCA_000343715.1_CA_glsol145	-	Fiocruz LV4212
Bacillus anthracis	1392	PRJNA368680	368680	Terrabacteria group	Firmicutes	5.40104	35.3024	plasmid pX01:NZ_CM007716.1/CM007716.1	MVOA01	203	6141	5574	2/27/17	3/2/17	Contig	Universidade Federal do Rio Grande do Sul	SAMN06270273	GCA_002007035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/035/GCA_002007035.1_ASM200703v1	-	Brazilian Vaccinal
Shigella flexneri 2005AH264	1434135	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.49269	50.4	-	AZON01	316	5008	4311	1/29/14	2/23/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437370	GCA_000565645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/645/GCA_000565645.1_ASM56564v1	-	2005AH264
Pseudomonas aeruginosa PA96	1457392	PRJNA237015	237015	Proteobacteria	Gammaproteobacteria	6.94493	65.6726	chromosome:NZ_CP007224.1/CP007224.1; plasmid pOZ176:NC_022344.1/KC543497.1	-	2	6663	6468	4/11/14	3/16/17	Chromosome	Universite Laval	SAMN03081533	GCA_000626655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/655/GCA_000626655.2_ASM62665v2	24673340	PA96
Acinetobacter baumannii ANC 4097	1217638	PRJNA183250	183250	Proteobacteria	Gammaproteobacteria	4.25258	39.1	-	APRF01	19	4197	4031	4/16/13	5/18/17	Scaffold	Broad Institute	SAMN01828141	GCA_000369365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/365/GCA_000369365.1_Acin_baum_ANC_4097_V1	-	ANC 4097
Streptococcus agalactiae CCUG 37741	1154813	PRJNA86235	86235	Terrabacteria group	Firmicutes	2.12745	35.3	-	ALQQ01	38	2193	2069	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991108	GCA_000288795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/795/GCA_000288795.1_ASM28879v1	-	CCUG 37741
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.33848	41.1	-	CEGO01	154	2324	2183	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233940	GCA_000936025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/025/GCA_000936025.1_Velvet_assembly	-	LS7E
Pseudomonas syringae ICMP 19498	1208100	PRJNA295866	295866	Proteobacteria	Gammaproteobacteria	6.03761	58.4	-	LKCH01	161	5532	5233	12/15/15	3/27/17	Contig	New Zealand Institute for Plant & Food research	SAMN04092435	GCA_001467105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/105/GCA_001467105.1_ASM146710v1	27056212	ICMP 19498
Legionella pneumophila	446	PRJNA281273	281273	Proteobacteria	Gammaproteobacteria	3.43743	38.3	-	LBAK01	27	3138	3035	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03486847	GCA_001582635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/635/GCA_001582635.1_ASM158263v1	26888563	WX2011046
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.88814	50.7	-	NQDH01	93	5096	4797	8/11/17	8/15/17	Contig	JCVI	SAMN07450664	GCA_002248165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/165/GCA_002248165.1_ASM224816v1	-	ECH+19
Bacteroides fragilis str. 3397 T10	1339284	PRJNA206115	206115	FCB group	Bacteroidetes/Chlorobi group	8.02954	44.4	-	JGCP01	2566	8165	8060	3/20/14	3/20/14	Contig	IGS	SAMN02363969	GCA_000598405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/405/GCA_000598405.1_ASM59840v1	-	3397 T10
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.42388	66.6	-	MUTI01	136	7951	7570	2/10/17	4/2/17	Contig	University of British Columbia	SAMN05001908	GCA_001992395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/395/GCA_001992395.1_ASM199239v1	-	VC14761
Burkholderia pseudomallei	28450	PRJNA244415	244415	Proteobacteria	Betaproteobacteria	7.34972	67.9	-	JOTT01	2	7624	6992	9/23/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02863530	GCA_000757145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/145/GCA_000757145.1_BFD	25414490	BFD
Chlamydia trachomatis 70	564418	PRJNA32187	32187	PVC group	Chlamydiae	1.04801	41.3	chromosome:NZ_ABYF01000001.1/ABYF01000001.1	ABYF01	1	971	896	1/30/09	3/22/17	Chromosome	Oregon State University	SAMN02470778	GCA_000173515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/515/GCA_000173515.1_ASM17351v1	-	-
Bacillus thuringiensis serovar canadensis	180855	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.80602	35.4	-	NGQG01	72	6261	5843	5/17/17	5/24/17	Contig	Huazhong Agricultural University	SAMN05934542	GCA_002147125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/125/GCA_002147125.1_ASM214712v1	-	BGSC 4H1
Vibrio cholerae HC-68A1	991983	PRJNA63973	63973	Proteobacteria	Gammaproteobacteria	4.02649	47.5	-	AGUW02	90	3818	3664	12/10/12	3/23/17	Scaffold	Institute for Genome Sciences	SAMN00262236	GCA_000327165.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/165/GCA_000327165.3_ASM32716v3	-	HC-68A1
Clostridioides difficile DA00261	1151356	PRJNA85887	85887	Terrabacteria group	Firmicutes	4.14405	28.7	-	AVKE01	15	3816	3678	8/20/13	4/10/17	Contig	Institute for Genome Sciences	SAMN01978900	GCA_000449565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/565/GCA_000449565.2_ASM44956v2	-	DA00261
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.8191	32.3	-	MRKD01	101	1908	1553	4/19/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773899	GCA_002100525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/525/GCA_002100525.1_ASM210052v1	28348839	FDC427
Brucella abortus F3/07-1	1160184	PRJNA173585	173585	Proteobacteria	Alphaproteobacteria	3.2858	57.2	-	AQMG01	6	3372	3149	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811176	GCA_000365725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/725/GCA_000365725.1_Bruc_abor_F3_07-1_V1	-	F3/07-1
Xanthomonas oryzae pv. oryzae	64187	PRJNA269464	269464	Proteobacteria	Gammaproteobacteria	4.30317	63.9	-	JXGI01	439	4288	3452	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252551	GCA_001928755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/755/GCA_001928755.1_ASM192875v1	-	IXO411
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.93885	38.1	-	MLMG01	322	2026	1746	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297046	GCA_001868375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/375/GCA_001868375.1_ASM186837v1	27118061	AWRIB331
Vibrio parahaemolyticus S170	1394702	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.06272	45.3	-	AWHK01	377	4770	4607	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02339016	GCA_000489095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/095/GCA_000489095.1_S170	-	S170
Bacillus subtilis	1423	PRJNA295652	295652	Terrabacteria group	Firmicutes	4.18721	43.4	-	LJSM01	49	4392	4275	4/13/16	3/28/17	Contig	NIZO food research	SAMN04087468	GCA_001619535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/535/GCA_001619535.1_ASM161953v1	-	B4417
Staphylococcus aureus	1280	PRJNA300829	300829	Terrabacteria group	Firmicutes	2.9356	32.8647	chromosome:NZ_CP013955.1/CP013955.1; plasmid pNCCP14562:NZ_CP013956.1/CP013956.1	-	2	3057	2868	5/9/16	3/6/17	Complete Genome	Catholic university of Korea	SAMN03955396	GCA_001640925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/925/GCA_001640925.1_ASM164092v1	-	NCCP14562
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.89855	28	-	LFOL01	79	3714	3529	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779986	GCA_001573235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/235/GCA_001573235.1_ASM157323v1	26939550	ATCC 17843 (B5)
Enterococcus faecalis EnGen0083	1151205	PRJNA85661	85661	Terrabacteria group	Firmicutes	2.90455	37.4	-	AIJD01	6	2955	2819	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00792311	GCA_000390865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/865/GCA_000390865.1_Ente_faec_7430275-3_V1	-	7430275-3
Streptococcus mutans 21	857112	PRJNA49839	49839	Terrabacteria group	Firmicutes	1.99007	36.7	-	AHSZ01	120	1975	1892	2/11/13	3/23/17	Contig	Cornell University	SAMN02428978	GCA_000339535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/535/GCA_000339535.1_ASM33953v1	23228887	21
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.15092	52.4	-	CQMC01	79	2534	2208	3/23/15	4/11/17	Contig	SC	SAMEA1677300	GCA_001109305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/305/GCA_001109305.1_8727_5_86	-	GCGS236
Enterococcus faecium EnGen0009	1138896	PRJNA82443	82443	Terrabacteria group	Firmicutes	2.86423	38.2	-	AHWX01	9	2876	2659	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779808	GCA_000321765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/765/GCA_000321765.1_Ente_faec_E1573_V1	-	E1573
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.19861	65.7	-	JVLS01	104	4863	4691	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197510	GCA_001070865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/865/GCA_001070865.1_ASM107086v1	26230489	32_SMAL
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.16129	41.1	-	CWAI01	71	2110	1932	6/23/15	3/26/17	Contig	SC	SAMEA1032878	GCA_001177025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/025/GCA_001177025.1_6903_3_36	-	EQUI0085
Pasteurella multocida subsp. septica	115545	PRJNA355236	355236	Proteobacteria	Gammaproteobacteria	2.37473	40.2	-	MTIG01	30	2306	2193	3/8/17	3/11/17	Scaffold	INRA	SAMN06140945	GCA_002023905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/905/GCA_002023905.1_ASM202390v1	-	CIRMBP-0827
Lactobacillus rhamnosus	47715	PRJEB4890	278722	Terrabacteria group	Firmicutes	3.01828	46.7	-	CBZU01	62	3002	2829	3/20/15	4/4/17	Scaffold	BIOPOLIS	SAMEA3158499	GCA_001368735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/735/GCA_001368735.1_CECT8361	-	BPL15
Brucella melitensis F5/07-239A	1160215	PRJNA173604	173604	Proteobacteria	Alphaproteobacteria	3.30061	57.2	-	AQNK01	9	3372	3124	4/16/13	4/1/17	Contig	Broad Institute	SAMN00811212	GCA_000366985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/985/GCA_000366985.1_Bruc_meli_F5_07-239A_V1	-	F5/07-239A
Staphylococcus aureus subsp. aureus	46170	PRJNA270571	270571	Terrabacteria group	Firmicutes	2.82417	32.8644	chromosome:NZ_CP010402.1/CP010402.1; plasmid pGR2A:NZ_CP010403.1/CP010403.1; plasmid pGR2B:NZ_CP010404.1/CP010404.1	-	3	2924	2760	9/22/15	3/5/17	Complete Genome	"University of Groningen, University Medical Center Groningen"	SAMN03267304	GCA_001296985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/985/GCA_001296985.1_ASM129698v1	26198147	GR2
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.40757	53.6	-	LSWO01	58	2323	2114	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497013	GCA_002202735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/735/GCA_002202735.1_S72	-	4994
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.45266	46.9	-	CQBT01	117	4211	3947	3/23/15	3/26/17	Scaffold	SC	SAMEA980179	GCA_001170365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/365/GCA_001170365.1_5103_7_9	-	ERL063683
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.11548	59.8	-	JVMS01	61	4856	4737	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197484	GCA_001064345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/345/GCA_001064345.1_ASM106434v1	26230489	290_SMAR
Lactobacillus plantarum	1590	PRJNA313909	313909	Terrabacteria group	Firmicutes	2.9977	44.6	-	LUWE01	87	2917	2753	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04525444	GCA_001633805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/805/GCA_001633805.1_ASM163380v1	-	Nizo2256
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.68238	31.3	-	CUMH01	16	1750	1664	3/31/15	3/18/17	Contig	SC	SAMEA1010674	GCA_001231965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/965/GCA_001231965.1_7065_7_34	-	OXC6380
Burkholderia sp. YR277	1882798	PRJEB19710	377491	Proteobacteria	Betaproteobacteria	10.7939	61.9	-	FUZX01	4	9860	9403	3/9/17	3/18/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05446934	GCA_900168175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/175/GCA_900168175.1_IMG-taxon_2711768617_annotated_assembly	-	YR277
Cutibacterium acnes	1747	PRJNA323688	323688	Terrabacteria group	Actinobacteria	2.47596	60	-	LZCI01	14	2498	2363	6/10/16	4/5/17	Scaffold	Aarhus University	SAMN05185369	GCA_001660865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/865/GCA_001660865.1_ASM166086v1	-	52.1.L4
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.60936	32.6	-	CUDJ01	90	2613	2475	3/31/15	4/21/17	Scaffold	SC	SAMEA1035072	GCA_001224245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/245/GCA_001224245.1_7067_4_51	-	51-26
Enterobacter cloacae subsp. dissolvens	69219	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.99114	55	-	LVUS01	76	4898	4644	4/25/16	3/28/17	Contig	JCVI	SAMN04572694	GCA_001631365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/365/GCA_001631365.1_ASM163136v1	-	GN05902
Cronobacter sakazakii NCIMB 8272	1367848	PRJNA213036	213036	Proteobacteria	Gammaproteobacteria	4.57402	56.8	-	AWFW01	81	4443	4233	8/30/13	4/4/17	Scaffold	"Nottingham Trent University, UK"	SAMN02261881	GCA_000463095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/095/GCA_000463095.2_CroSakNCIMB8271_1.0	24072871	NCIMB 8272
Mycobacterium abscessus subsp. abscessus	1185650	PRJNA347845	347845	Terrabacteria group	Actinobacteria	5.09865	64.1	-	MLCG01	37	5113	5023	1/11/17	3/21/17	Contig	University of Georgia	SAMN05897971	GCA_001942505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/505/GCA_001942505.1_ASM194250v1	-	ATCC 19977
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.52717	67.3	-	LPCB01	142	6918	6515	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449390	GCA_001528305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/305/GCA_001528305.1_ASM152830v1	-	MSMB2012WGS
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.93814	38.7	-	NGDU01	80	3861	3678	5/15/17	5/23/17	Contig	JCVI	SAMN06837754	GCA_002137635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/635/GCA_002137635.1_ASM213763v1	-	PR331
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA271006	271006	Proteobacteria	Gammaproteobacteria	5.25935	55.1	-	JZKR01	173	5233	4961	3/30/15	3/26/17	Contig	JCVI	SAMN03277194	GCA_000966055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/055/GCA_000966055.1_ASM96605v1	-	CIDEIMsCOL7
Klebsiella aerogenes	548	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.24301	54.8	-	NDEY01	67	5207	4965	6/8/17	6/10/17	Contig	JCVI	SAMN06218053	GCA_002182075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/075/GCA_002182075.1_ASM218207v1	-	42193
Pseudomonas sp. PAMC 25886	1125977	PRJNA78809	78809	Proteobacteria	Gammaproteobacteria	7.02184	61.2	-	AHHC01	95	6494	6299	1/12/12	5/19/17	Contig	Korea Polar Research Institute	SAMN02470163	GCA_000242655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/655/GCA_000242655.2_ASM24265v2	22408245	PAMC 25886
Streptomyces sp. Root1310	1736452	PRJNA297942	297942	Terrabacteria group	Actinobacteria	9.5401	71.5	-	LMEQ01	35	8438	7991	11/2/15	3/12/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155721	GCA_001426425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/425/GCA_001426425.1_Root1310	26633631	Root1310
Bacillus sp. LK2	1628206	PRJNA277395	277395	Terrabacteria group	Firmicutes	5.43936	35.1	-	LDUK01	116	5808	5296	6/30/15	4/10/17	Contig	University of Malaya	SAMN03390108	GCA_001043575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/575/GCA_001043575.1_ASM104357v1	-	LK2
Acinetobacter sp. 826659	1310764	PRJNA194840	194840	Proteobacteria	Gammaproteobacteria	3.91526	38.9	-	JFYD01	40	3772	3564	3/11/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02415076	GCA_000588515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/515/GCA_000588515.1_ASM58851v1	-	826659
Clostridium sp. CAG:465	1262811	PRJEB891	206864	Terrabacteria group	Firmicutes	1.17748	26.8	-	CBFY01	64	1205	1173	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138575	GCA_000433755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/755/GCA_000433755.1_MGS465	-	-
Sphingomonas sp. JGI 0001002-D21	1094942	PRJNA176058	176058	Proteobacteria	Alphaproteobacteria	0.519583	65.2	-	AUNZ02	52	-	-	7/16/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441131	GCA_000463955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/955/GCA_000463955.2_ASM46395v2	-	JGI 0001002-D21
Rhodococcus sp. 05-2255-2A2	2022488	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.69779	64.7	-	NOZD01	56	5432	5264	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376358	GCA_002258995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/995/GCA_002258995.1_ASM225899v1	-	05-2255-2A2
Enterobacter cloacae complex sp. GN05753	1870957	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.81623	55.7	-	LRCX01	199	4896	4470	1/19/16	4/20/17	Contig	JCVI	SAMN04407794	GCA_001518455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/455/GCA_001518455.1_ASM151845v1	-	GN05753
Staphylococcus sp. HMSC060A04	1715158	PRJNA296286	296286	Terrabacteria group	Firmicutes	2.5298	33.7	-	LTQT01	36	2411	2336	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498644	GCA_001836545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/545/GCA_001836545.1_ASM183654v1	-	HMSC060A04
Corynebacterium sp. HMSC074C04	1739514	PRJNA300164	300164	Terrabacteria group	Actinobacteria	2.44216	58.5	-	LWPW01	15	2181	2003	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498698	GCA_001838295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/295/GCA_001838295.1_ASM183829v1	-	HMSC074C04
Streptococcus sp. GMD4S	1169673	PRJNA157417	157417	Terrabacteria group	Firmicutes	2.30198	41	-	AJRE01	578	2422	2114	9/14/12	4/7/17	Contig	Los Alamos National Laboratory	SAMN02470259	GCA_000296955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/955/GCA_000296955.1_ASM29695v1	23493677	GMD4S
Mycobacterium sp. 852002-50816_SCH5313054-b	1834092	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.52089	68.5	-	LZIC01	149	5336	5046	6/17/16	4/13/17	Contig	JCVI	SAMN04696148	GCA_001667185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/185/GCA_001667185.1_ASM166718v1	-	852002-50816_SCH5313054-b
Paenibacillus sp. 1ZS3-15	1850517	PRJNA321931	321931	Terrabacteria group	Firmicutes	8.31109	45.3	-	LYPB01	97	6952	6759	5/31/16	4/12/17	Scaffold	Chinese Academy of agricultural Sciences(CAAS)	SAMN05006722	GCA_001653565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/565/GCA_001653565.1_ASM165356v1	-	1ZS3-15
Prochlorococcus sp. scB241_528P18	1471461	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.4643	31.3	-	JFLL01	295	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671332	GCA_000635395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/395/GCA_000635395.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Rhizobium sp. JGI 0001019-L19	1268317	PRJNA183551	183551	Proteobacteria	Alphaproteobacteria	1.64337	61	-	AXYP01	171	-	-	10/25/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441423	GCA_000483365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/365/GCA_000483365.1_ASM48336v1	-	JGI 0001019-L19
Staphylococcus argenteus	985002	PRJEB20633	390605	Terrabacteria group	Firmicutes	2.74028	32.2	-	FXVV01	40	2697	2514	6/15/17	7/5/17	Scaffold	Geogentics	SAMEA104034168	GCA_900183925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/925/GCA_900183925.1_M4143	-	-
Staphylococcus argenteus	985002	PRJEB20633	390605	Terrabacteria group	Firmicutes	2.79642	32.3	-	FXVZ01	66	2795	2615	6/15/17	7/5/17	Scaffold	Geogentics	SAMEA104034161	GCA_900183945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/945/GCA_900183945.1_O-6	-	-
Rhizobium sp. JGI 0001003-A11	1268313	PRJNA183547	183547	Proteobacteria	Alphaproteobacteria	2.24554	60.1	-	AXYS01	216	-	-	10/25/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441425	GCA_000483385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/385/GCA_000483385.1_ASM48338v1	-	JGI 0001003-A11
Prochlorococcus sp. scB241_529B19	1471462	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.48031	31.5	-	JFLM01	300	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671333	GCA_000635415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/415/GCA_000635415.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Paenibacillus sp. AD87	1528787	PRJNA320373	320373	Terrabacteria group	Firmicutes	7.08671	46.2	-	LXQN01	30	6286	6023	6/8/16	4/12/17	Scaffold	Netherlands Institute of Ecology	SAMN04934393	GCA_001659845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/845/GCA_001659845.1_gpAD87_02162016	-	AD87
Mycobacterium sp. ACS4331	1834121	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.75508	68	-	LZHW01	114	5389	5212	6/17/16	4/12/17	Contig	JCVI	SAMN04634265	GCA_001667265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/265/GCA_001667265.1_ASM166726v1	-	ACS4331
Streptococcus sp. GMD2S	1169671	PRJNA157413	157413	Terrabacteria group	Firmicutes	2.04711	40.6	-	AJRA01	612	2157	1877	9/14/12	4/7/17	Contig	Los Alamos National Laboratory	SAMN02470273	GCA_000296995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/995/GCA_000296995.1_ASM29699v1	23493677	GMD2S
Corynebacterium sp. HMSC074C05	1739534	PRJNA300185	300185	Terrabacteria group	Actinobacteria	2.40969	58.9	-	LTNQ01	25	2120	2032	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498690	GCA_001838325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/325/GCA_001838325.1_ASM183832v1	-	HMSC074C05
Staphylococcus sp. HMSC060D12	1715049	PRJNA296176	296176	Terrabacteria group	Firmicutes	2.7837	32.6	-	LTQQ01	69	2899	2772	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498580	GCA_001836595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/595/GCA_001836595.1_ASM183659v1	-	HMSC060D12
Enterobacter cloacae complex sp. GN02693	1870953	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.21083	55.5	-	LRCA01	244	5314	4846	1/19/16	4/20/17	Contig	JCVI	SAMN04407767	GCA_001518535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/535/GCA_001518535.1_ASM151853v1	-	GN02693
Rhodococcus sp. 05-2255-1e	2022495	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.75291	64.5	-	NOZE01	51	5432	5277	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376365	GCA_002259025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/025/GCA_002259025.1_ASM225902v1	-	05-2255-1e
Sphingomonas sp. JGI 0001003-D23	1094944	PRJNA176072	176072	Proteobacteria	Alphaproteobacteria	0.969519	65.5	-	AUOL02	68	-	-	7/16/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441460	GCA_000464195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/195/GCA_000464195.2_ASM46419v2	-	JGI 0001003-D23
Clostridium sp. CAG:793	1262840	PRJEB1010	206837	Terrabacteria group	Firmicutes	1.26169	29	-	CAZG01	27	1191	1163	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138583	GCA_000433915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/915/GCA_000433915.1_MGS793	-	-
Acinetobacter sp. 742879	1310791	PRJNA194867	194867	Proteobacteria	Gammaproteobacteria	4.04023	38.8	-	JFYC01	55	3918	3696	3/11/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02415074	GCA_000588535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/535/GCA_000588535.1_ASM58853v1	-	742879
Bacillus sp. LK10	1628211	PRJNA277402	277402	Terrabacteria group	Firmicutes	3.68789	41.3	-	LDUQ01	71	3839	3708	6/30/15	4/10/17	Contig	University of Malaya	SAMN03392522	GCA_001043795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/795/GCA_001043795.1_ASM104379v1	-	LK10
Streptomyces sp. Root431	1736535	PRJNA297942	297942	Terrabacteria group	Actinobacteria	6.49704	72.2	-	LMEI01	13	5887	5668	11/2/15	3/12/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155804	GCA_001426585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/585/GCA_001426585.1_Root431	26633631	Root431
Pseudomonas sp. M47T1	1179778	PRJNA162465	162465	Proteobacteria	Gammaproteobacteria	6.31063	62.5	-	AJWX01	88	5785	5571	5/22/12	5/19/17	Contig	University of Coimbra - Faculty of Life Sciences	SAMN02471701	GCA_000263855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/855/GCA_000263855.1_ASM26385v1	22887683	M47T1
Klebsiella aerogenes	548	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.12822	55	-	NEYU01	54	5050	4820	6/9/17	6/12/17	Contig	JCVI	SAMN06812615	GCA_002184575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/575/GCA_002184575.1_ASM218457v1	-	ARLG-2973
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA271006	271006	Proteobacteria	Gammaproteobacteria	5.22403	55.1	-	JZKS01	146	5183	4918	3/30/15	3/25/17	Contig	JCVI	SAMN03277195	GCA_000966085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/085/GCA_000966085.1_ASM96608v1	-	CIDEIMsCOL8
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.99187	38.7	-	NGEF01	104	3905	3696	5/15/17	5/23/17	Contig	JCVI	SAMN06837738	GCA_002137805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/805/GCA_002137805.1_ASM213780v1	-	PR344
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.16011	67.5	-	LPCC01	107	6445	6115	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449391	GCA_001528325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/325/GCA_001528325.1_ASM152832v1	-	MSMB2013WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJNA347845	347845	Terrabacteria group	Actinobacteria	5.25317	64.2	-	MLCJ01	53	5260	5120	1/11/17	3/21/17	Contig	University of Georgia	SAMN05897974	GCA_001942565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/565/GCA_001942565.1_ASM194256v1	-	06_0524
Cronobacter sakazakii 8399	1397689	PRJNA218022	218022	Proteobacteria	Gammaproteobacteria	4.6548	56.7	-	AWSP01	32	4541	4358	9/16/13	4/4/17	Scaffold	"Nottingham Trent University, UK"	SAMN02470723	GCA_000467775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/775/GCA_000467775.2_CsakCC4_8399_1.0	24115548	8399
Enterobacter cloacae	550	PRJNA319130	319130	Proteobacteria	Gammaproteobacteria	4.63638	55.8	-	LXPT01	37	4489	4301	5/10/16	3/28/17	Contig	University of Florida	SAMN04943266	GCA_001641445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/445/GCA_001641445.1_ASM164144v1	-	KCJK1735
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.53907	32.7	-	CUGC01	60	2514	2375	3/31/15	3/26/17	Scaffold	SC	SAMEA1035141	GCA_001224745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/745/GCA_001224745.1_7068_7_35	-	131776
Cutibacterium acnes	1747	PRJNA323688	323688	Terrabacteria group	Actinobacteria	2.50748	60.1	-	LZCL01	36	2531	2378	6/10/16	4/5/17	Scaffold	Aarhus University	SAMN05185378	GCA_001660875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/875/GCA_001660875.1_ASM166087v1	-	48.1.L1
Burkholderia sp. URHA0054	1298859	PRJNA190816	190816	Proteobacteria	Betaproteobacteria	7.2448	62.8	-	ATXV01	53	6492	6239	7/9/13	4/8/17	Scaffold	DOE Joint Genome Institute	SAMN02441233	GCA_000421865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/865/GCA_000421865.1_ASM42186v1	-	URHA0054
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70818	31.3	-	CULD01	19	1768	1678	3/31/15	3/18/17	Contig	SC	SAMEA1010478	GCA_001232025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/025/GCA_001232025.1_7038_3_93	-	OXC6343
Lactobacillus plantarum	1590	PRJNA313512	313512	Terrabacteria group	Firmicutes	3.03408	44.5	-	LUWA01	100	2957	2787	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04524170	GCA_001639425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/425/GCA_001639425.1_ASM163942v1	-	Nizo1838
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.19632	59.5	-	JVJT01	52	4883	4771	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197561	GCA_001064715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/715/GCA_001064715.1_ASM106471v1	26230489	370_SMAR
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.46819	47.1	-	CPYO01	76	4177	3899	3/23/15	3/26/17	Scaffold	SC	SAMEA980205	GCA_001171185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/185/GCA_001171185.1_5116_3_5	-	Y286
Corynebacterium diphtheriae bv. mitis	1806053	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.39746	53.6	-	LSWT01	41	2327	2112	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497017	GCA_002202755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/755/GCA_002202755.1_S77	-	5085
Staphylococcus aureus	1280	PRJNA240091	240091	Terrabacteria group	Firmicutes	2.98805	32.8642	chromosome:NZ_CP007499.1/CP007499.1; plasmid pUSA500:NZ_CP007500.1/CP007500.1	-	2	3187	3009	8/29/14	3/4/17	Complete Genome	Columbia University	SAMN03290990	GCA_000746505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/505/GCA_000746505.1_ASM74650v1	24962815	2395 USA500
Brucella melitensis F6/05-6	1169225	PRJNA173534	173534	Proteobacteria	Alphaproteobacteria	3.29875	57.2	-	AQNL01	10	3375	3152	4/16/13	4/1/17	Contig	Broad Institute	SAMN00839731	GCA_000367005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/005/GCA_000367005.1_Bruc_meli_F6_05-6_V1	-	F6/05-6
Lactobacillus rhamnosus	47715	PRJNA348789	348789	Terrabacteria group	Firmicutes	2.94565	46.7	-	MLKB01	37	2966	2751	10/21/16	4/5/17	Scaffold	The University of Queensland	SAMN05915697	GCA_001831215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/215/GCA_001831215.1_ASM183121v1	-	ASCC 3018
Pasteurella multocida subsp. multocida	44283	PRJNA355236	355236	Proteobacteria	Gammaproteobacteria	2.34903	40.2	-	MTII01	28	2261	2167	3/8/17	3/14/17	Scaffold	INRA	SAMN06140948	GCA_002023925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/925/GCA_002023925.1_ASM202392v1	-	CIRMBP-0877
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12668	41.2	-	CWCA01	73	2065	1877	6/24/15	3/26/17	Contig	SC	SAMEA1032879	GCA_001177045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/045/GCA_001177045.1_6903_5_87	-	EQUI0136
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.1863	65.7	-	JVKE01	178	4851	4691	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197550	GCA_001070945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/945/GCA_001070945.1_ASM107094v1	26230489	36_SMAL
Enterococcus faecium EnGen0020	1138897	PRJNA82445	82445	Terrabacteria group	Firmicutes	2.81872	38.1	-	AHWY01	18	2854	2659	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779809	GCA_000321785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/785/GCA_000321785.1_Ente_faec_E1574_V1	-	E1574
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.14751	52.4	-	CQLH01	80	2517	2197	3/23/15	4/11/17	Contig	SC	SAMEA1677456	GCA_001109425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/425/GCA_001109425.1_8727_5_46	-	GCGS196
Streptococcus mutans B	857110	PRJNA49843	49843	Terrabacteria group	Firmicutes	1.94812	36.7	-	AHTB01	111	1930	1847	2/11/13	3/23/17	Contig	Cornell University	SAMN02429070	GCA_000339555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/555/GCA_000339555.1_ASM33955v1	23228887	B
Enterococcus faecalis EnGen0084	1151206	PRJNA85663	85663	Terrabacteria group	Firmicutes	2.79156	37.7	-	AIJE01	4	2778	2639	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00792312	GCA_000390885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/885/GCA_000390885.1_Ente_faec_7430315-3_V1	-	7430315-3
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.71299	27.1	-	LFOM01	42	3368	3254	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779999	GCA_001573245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/245/GCA_001573245.1_ASM157324v1	26939550	211
Staphylococcus aureus	1280	PRJNA369164	369164	Terrabacteria group	Firmicutes	2.83971	32.8599	chromosome:NZ_CP019563.1/CP019563.1; plasmid pSR01:NZ_CP019564.1/CP019564.1; plasmid pSR02:NZ_CP019565.1/CP019565.1; plasmid pSR03:NZ_CP019566.1/CP019566.1; plasmid pSR04:NZ_CP019567.1/CP019567.1	-	5	2971	2808	2/6/17	3/6/17	Complete Genome	Zhejiang University	SAMN06277866	GCA_001986135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/986/135/GCA_001986135.1_ASM198613v1	-	SR434
Bacillus subtilis subsp. subtilis	135461	PRJNA316980	316980	Terrabacteria group	Firmicutes	4.11957	43.7	-	LVYH01	28	4297	4102	4/20/16	3/28/17	Contig	Ciquibic-Conicet-UNC	SAMN04594889	GCA_001625135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/625/135/GCA_001625135.1_ASM162513v1	-	ALBA01
Vibrio parahaemolyticus S168	1394701	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.02851	45.3	-	AWHL01	349	4832	4656	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02339015	GCA_000489115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/115/GCA_000489115.1_S168	-	S168
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.93922	38	-	MLMJ01	372	1990	1738	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297049	GCA_001868405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/405/GCA_001868405.1_ASM186840v1	27118061	AWRIB334
Xanthomonas oryzae pv. oryzae	64187	PRJNA269463	269463	Proteobacteria	Gammaproteobacteria	4.35748	63.9	-	JXGH01	440	4386	3541	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252571	GCA_001928765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/765/GCA_001928765.1_ASM192876v1	-	IXO390
Brucella abortus F3/01-300	1238668	PRJNA176541	176541	Proteobacteria	Alphaproteobacteria	3.28642	57.2	-	AQMF01	3	3378	3160	4/16/13	3/23/17	Contig	Broad Institute	SAMN01757984	GCA_000365745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/745/GCA_000365745.1_Bruc_abor_F3_01-0300_V1	-	F3/01-300
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.83474	32.3	-	MRKC01	117	1949	1548	4/19/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773900	GCA_002100535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/535/GCA_002100535.1_ASM210053v1	28348839	FDC428
Clostridioides difficile CD181	1151299	PRJNA85771	85771	Terrabacteria group	Firmicutes	4.33853	28.7	-	AVID01	96	4093	3880	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766600	GCA_000449585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/585/GCA_000449585.2_ASM44958v2	-	CD181
Vibrio cholerae HC-71A1	991985	PRJNA63977	63977	Proteobacteria	Gammaproteobacteria	4.02895	47.5	-	AGUX02	91	3828	3674	12/10/12	3/23/17	Scaffold	Institute for Genome Sciences	SAMN00262233	GCA_000327185.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/185/GCA_000327185.3_ASM32718v3	-	HC-71A1
Bacillus thuringiensis serovar aizawai	1433	PRJNA349211	349211	Terrabacteria group	Firmicutes	7.04591	34.8	-	NFDW01	278	7538	6955	5/17/17	6/16/17	Contig	Huazhong Agricultural University	SAMN05934547	GCA_002147185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/185/GCA_002147185.1_ASM214718v1	-	BGSC 4J3
Chlamydia trachomatis 70s	564419	PRJNA32189	32189	PVC group	Chlamydiae	1.04606	41.3	chromosome:NZ_ABYG01000001.1/ABYG01000001.1	ABYG01	1	968	892	1/30/09	3/22/17	Chromosome	Oregon State University	SAMN02470779	GCA_000173535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/535/GCA_000173535.1_ASM17353v1	-	-
Burkholderia pseudomallei	28450	PRJNA244416	244416	Proteobacteria	Betaproteobacteria	7.50739	67.8	-	JOTU01	3	7762	7172	9/23/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02863534	GCA_000757165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/165/GCA_000757165.1_BGH	25414490	BGH
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	6.66837	67.1	-	MUTL01	64	6248	5996	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001911	GCA_001992435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/435/GCA_001992435.1_ASM199243v1	-	VC12201
Bacteroides fragilis str. B1 (UDC16-1)	1339273	PRJNA206104	206104	FCB group	Bacteroidetes/Chlorobi group	7.60341	43	-	JGDU01	311	6247	6141	3/20/14	3/20/14	Contig	IGS	SAMN02363659	GCA_000598625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/598/625/GCA_000598625.1_ASM59862v1	-	B1 (UDC16-1)
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.06303	50.7	-	NQDI01	138	5319	4951	8/11/17	8/15/17	Contig	JCVI	SAMN07450663	GCA_002248175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/175/GCA_002248175.1_ASM224817v1	-	ECH+20
Legionella pneumophila	446	PRJNA281278	281278	Proteobacteria	Gammaproteobacteria	3.33243	38.3	-	LBAN01	44	3061	2903	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03486855	GCA_001582645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/645/GCA_001582645.1_ASM158264v1	26888563	WD_4_1102b-36
Pseudomonas syringae ICMP 11292	1198307	PRJNA296733	296733	Proteobacteria	Gammaproteobacteria	5.8096	58.8	-	LKGU01	70	5442	5147	12/15/15	3/27/17	Contig	New Zealand Institute for Plant & Food research	SAMN04102818	GCA_001467365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/365/GCA_001467365.1_ASM146736v1	27056212	ICMP 11292
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	1.96454	41.3	-	CEHZ01	64	1953	1866	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234026	GCA_000936045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/045/GCA_000936045.1_Velvet_assembly	-	S16E
Streptococcus agalactiae CCUG 37742	1154814	PRJNA86237	86237	Terrabacteria group	Firmicutes	2.17271	35.3	-	ALQR01	46	2221	2028	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991112	GCA_000288815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/815/GCA_000288815.1_ASM28881v1	-	CCUG 37742
Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841	575584	PRJNA183249	183249	Proteobacteria	Gammaproteobacteria	4.0289	39.1	-	APRG01	23	3870	3693	4/16/13	3/15/17	Scaffold	Broad Institute	SAMN01828140	GCA_000369385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/369/385/GCA_000369385.1_Acin_baum_CIP_70_34T_V1	-	CIP 70.34
Pseudomonas aeruginosa PAO1H2O	1147787	PRJNA83447	83447	Proteobacteria	Gammaproteobacteria	6.2644	66.3	chromosome:NZ_CP008749.1/CP008749.1	-	1	5838	5494	6/27/14	3/16/17	Chromosome	University of Virginia	SAMN02740985	GCA_000714515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/515/GCA_000714515.1_ASM71451v1	-	PAO1H2O
Shigella flexneri Shi06AH135	1434136	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.45548	50.4	-	AZOO01	302	4954	4262	1/29/14	2/22/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437371	GCA_000565665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/665/GCA_000565665.1_ASM56566v1	-	Shi06AH135
Bacillus anthracis	1392	PRJNA336484	336484	Terrabacteria group	Firmicutes	5.36666	35.2	-	MVIR01	70	5991	5659	3/6/17	3/8/17	Contig	National Center for Disease Control and Public Health (NCDC) of Georgia	SAMN05511433	GCA_002019425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/425/GCA_002019425.1_ASM201942v1	-	Ba-8884/94-Geo
Leptospira interrogans serovar Copenhageni str. Wijnberg	1291341	PRJNA189008	189008	Spirochaetes	Spirochaetia	4.61331	35	-	AOVI01	151	4130	3732	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920588	GCA_000343735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/735/GCA_000343735.1_CA_glsol146	-	Wijnberg
Streptococcus pyogenes ABC020044193	1439134	PRJNA233165	233165	Terrabacteria group	Firmicutes	1.82708	38.6	-	JJGT01	7	1866	1737	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567514	GCA_000630525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/525/GCA_000630525.1_Stre_pyog_ABC020044193_V1	-	ABC020044193
Neisseria meningitidis	487	PRJNA244891	244891	Proteobacteria	Betaproteobacteria	2.1522	51.5	-	JMDH01	90	2486	2110	7/20/15	3/21/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02729512	GCA_001183445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/445/GCA_001183445.1_Nm370601	25989189	370601
Helicobacter pylori	210	PRJDB4296	362565	Proteobacteria	delta/epsilon subdivisions	1.58812	38.9	chromosome:AP017354.1	-	1	1580	1546	1/18/17	1/18/17	Chromosome	"Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture"	SAMD00042482	GCA_002357735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/735/GCA_002357735.1_ASM235773v1	-	F90
Streptococcus pneumoniae BR1064	1001746	PRJNA64981	64981	Terrabacteria group	Firmicutes	2.04072	39.5	-	AFBZ01	245	2163	2004	4/11/11	3/9/17	Contig	Yale University	SAMN02472137	GCA_000203735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/203/735/GCA_000203735.2_ASM20373v2	21551297	BR1064
Staphylococcus aureus subsp. aureus TCH60	548473	PRJNA31539	31539	Terrabacteria group	Firmicutes	2.82717	32.8593	chromosome:NC_017342.1/CP002110.1; plasmid unnamed:NC_017345.1/CP002111.1	-	2	2907	2691	11/23/10	3/2/17	Complete Genome	Baylor College of Medicine	SAMN00002240	GCA_000159535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/535/GCA_000159535.2_ASM15953v2	-	TCH60
Mycobacterium tuberculosis KZN R506	663886	PRJNA39767	39767	Terrabacteria group	Actinobacteria	4.39724	65.4498	chromosome:NZ_CM000789.2/CM000789.2	ACVU02	1	4311	4095	10/13/09	5/18/17	Chromosome	Texas A&M University	SAMN02471040	GCA_000163015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/015/GCA_000163015.1_ASM16301v1	19890396	KZN R506
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.86959	38	-	FFIG01	24	1901	1757	2/9/16	3/27/17	Scaffold	SC	SAMEA2674738	GCA_900026985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/985/GCA_900026985.1_14412_4_21	-	2842STDY5882049
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.34029	68.9	-	BDNX01	295	5122	4781	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076675	GCA_002089675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/675/GCA_002089675.1_ASM208967v1	28045086	MK20-5
Lactococcus lactis subsp. cremoris TIFN7	1234877	PRJNA175675	175675	Terrabacteria group	Firmicutes	2.63409	35.6	-	ATBA01	370	2853	2505	8/19/13	1/8/14	Contig	Top Institute Food and Nutrition	SAMN02472106	GCA_000447965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/965/GCA_000447965.1_LLT7.01	23823494	TIFN7
Bacillus cereus BAG5X1-1	1053189	PRJNA70343	70343	Terrabacteria group	Firmicutes	5.63517	35.5	-	AHDJ01	15	5804	5367	8/15/12	6/15/17	Scaffold	Broad Institute	SAMN02596821	GCA_000291295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/295/GCA_000291295.1_Baci_cere_BAG5X1-1_V1	-	BAG5X1-1
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.43842	32	-	JWCR01	107	2386	2307	7/10/15	3/26/17	Contig	University of Washington	SAMN03197069	GCA_001070245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/245/GCA_001070245.1_ASM107024v1	26230489	1115_SEPI
Staphylococcus aureus	1280	PRJNA246185	246185	Terrabacteria group	Firmicutes	2.87437	32.8592	chromosome:NZ_CP007657.1/CP007657.1; plasmid pV2200:NZ_CP007658.1/CP007658.1	-	2	3021	2849	10/23/15	3/5/17	Complete Genome	Columbia University	SAMN02743812	GCA_001046095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/095/GCA_001046095.2_ASM104609v2	26048971	V2200
Pseudomonas fluorescens	294	PRJNA339171	339171	Proteobacteria	Gammaproteobacteria	6.82244	60.2	-	MSDF01	65	6260	6064	3/7/17	3/10/17	Scaffold	USDA	SAMN05589717	GCA_002022275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/275/GCA_002022275.1_ASM202227v1	-	P5A
Yersinia pestis biovar Orientalis str. AS200901509	1084234	PRJNA73113	73113	Proteobacteria	Gammaproteobacteria	4.60507	47.5	-	AGKA01	263	4338	4094	3/22/12	5/19/17	Contig	US Army Edgewood Chemical Biological Center	SAMN01831181	GCA_000255895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/895/GCA_000255895.1_ASM25589v1	22359605	AS200901509
Staphylococcus aureus subsp. aureus	46170	PRJNA287201	287201	Terrabacteria group	Firmicutes	2.88961	32.8586	chromosome:NZ_CP012756.1/CP012756.1; plasmid unnamed:NZ_CP012757.1/CP012757.1	-	2	2974	2758	10/6/15	3/5/17	Complete Genome	Statens Serum Institut	SAMN03777299	GCA_001307235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/235/GCA_001307235.1_ASM130723v1	-	JS395
Lactobacillus salivarius	1624	PRJNA326401	326401	Terrabacteria group	Firmicutes	2.08359	32.8541	chromosome:NZ_CP017107.1/CP017107.1; plasmid pLS_1:NZ_CP017108.1/CP017108.1; plasmid pLS_2:NZ_CP017109.1/CP017109.1; plasmid pLS_3:NZ_CP017110.1/CP017110.1	-	4	2062	1857	9/13/16	4/5/17	Complete Genome	Acadamy of Military Medical Sciences	SAMN05277751	GCA_001723525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/525/GCA_001723525.1_ASM172352v1	-	CICC 23174
Staphylococcus aureus	1280	PRJNA240093	240093	Terrabacteria group	Firmicutes	2.78769	32.8538	chromosome:NZ_CP007454.1/CP007454.1; plasmid unnamed:NZ_CP007455.1/CP007455.1	-	2	2910	2749	3/19/14	3/3/17	Complete Genome	Columbia University	SAMN02690781	GCA_000597965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/965/GCA_000597965.1_ASM59796v1	24723721	502A
Staphylococcus aureus	1280	PRJNA294307	294307	Terrabacteria group	Firmicutes	2.89373	32.846	chromosome:NZ_CP012593.1/CP012593.1; plasmid pVR-MSSA_01:NZ_CP012594.1/CP012594.1; plasmid pVR-MSSA_02:NZ_CP012595.1/CP012595.1; plasmid pVR-MSSA_03:NZ_CP012596.1/CP012596.1	-	4	3039	2854	9/4/15	3/5/17	Complete Genome	Universidad El Bosque	SAMN03092273	GCA_001278745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/745/GCA_001278745.1_ASM127874v1	26402569	HOU1444-VR
Staphylococcus aureus subsp. aureus	46170	PRJNA354449	354449	Terrabacteria group	Firmicutes	2.86258	32.8457	chromosome:NZ_CP018768.1/CP018768.1; plasmid pUCI28:NZ_CP018769.1/CP018769.1	-	2	2976	2804	1/30/17	3/6/17	Complete Genome	USDA-ARS	SAMN06046106	GCA_001975045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/045/GCA_001975045.1_ASM197504v1	-	UCI 28
Staphylococcus aureus	1280	PRJNA270620	270620	Terrabacteria group	Firmicutes	2.81081	32.8447	chromosome:NZ_CP010890.1/CP010890.1; plasmid pSA564:NZ_CP010891.1/CP010891.1	-	2	2918	2761	9/11/15	3/5/17	Complete Genome	University of Geneva	SAMN03267711	GCA_001281145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/145/GCA_001281145.1_ASM128114v1	25997461	SA564
Yersinia pestis PY-02	992128	PRJNA64283	64283	Proteobacteria	Gammaproteobacteria	4.64321	47.5	-	AKRN01	578	4555	4204	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141449	GCA_000268325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/325/GCA_000268325.1_ASM26832v1	-	PY-02
Pseudomonas fluorescens	294	PRJNA339171	339171	Proteobacteria	Gammaproteobacteria	6.40774	60.2	-	MSDI01	42	5919	5754	3/7/17	3/11/17	Scaffold	USDA	SAMN05589721	GCA_002022325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/325/GCA_002022325.1_ASM202232v1	-	E24
Staphylococcus aureus subsp. aureus ST228	1074919	PRJEA71351	71351	Terrabacteria group	Firmicutes	2.79674	32.844	chromosome:NC_020566.1/HE579067.1; plasmid pI5S5:NC_020535.1/HE579068.1	-	2	2883	2705	10/5/12	3/2/17	Complete Genome	Swiss Institute of Bioinformatics - Vital-IT group	SAMEA2272299	GCA_000382985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/985/GCA_000382985.1_ASM38298v1	22720005	ST228
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.42101	32	-	JVUO01	124	2349	2261	7/10/15	3/26/17	Contig	University of Washington	SAMN03197280	GCA_001070485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/485/GCA_001070485.1_ASM107048v1	26230489	1306.rep1_SEPI
Bacillus cereus CER074	1053199	PRJNA70363	70363	Terrabacteria group	Firmicutes	5.60356	35.4	-	AHDT01	5	5929	5563	8/15/12	6/15/17	Scaffold	Broad Institute	SAMN02596831	GCA_000291315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/315/GCA_000291315.1_Baci_cere_CER074_V1	-	CER074
Lactococcus lactis subsp. cremoris	1359	PRJNA277814	277814	Terrabacteria group	Firmicutes	2.60744	35.6	-	LAVX01	103	2729	2678	5/8/15	5/8/15	Contig	Teagasc	SAMN03396976	GCA_001005455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/455/GCA_001005455.1_ASM100545v1	-	DPC6860
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.48243	68.8	-	BDNY01	382	5244	4865	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076685	GCA_002089695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/695/GCA_002089695.1_ASM208969v1	28045086	NB-36042
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.8696	38	-	FFII01	22	1898	1750	2/9/16	3/27/17	Scaffold	SC	SAMEA2674744	GCA_900026995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/995/GCA_900026995.1_14412_4_27	-	2842STDY5882055
Mycobacterium tuberculosis HN878	747367	PRJNA46665	46665	Terrabacteria group	Actinobacteria	4.40467	65.2487	chromosome:NZ_CM001043.1/CM001043.1	ADNF01	1	4314	4087	11/30/10	5/18/17	Chromosome	Texas A&M University	SAMN02471088	GCA_000184005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/184/005/GCA_000184005.1_ASM18400v1	21110864	HN878
Staphylococcus aureus subsp. aureus ECT-R 2	889933	PRJEA52833	52833	Terrabacteria group	Firmicutes	2.75905	32.8419	chromosome:NC_017343.1/FR714927.1; plasmid pLUH01:NC_017346.1/FR714928.1; plasmid pLUH02:NC_017344.1/FR714929.1	-	3	2851	2691	11/24/10	3/2/17	Complete Genome	The Norwegian High-Throughput Sequencing Centre	SAMEA2271964	GCA_000253135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/135/GCA_000253135.1_ASM25313v1	21590357	-
Streptococcus pneumoniae ND6012	1001747	PRJNA64983	64983	Terrabacteria group	Firmicutes	2.03807	39.5	-	AFCA01	277	2175	1992	4/11/11	3/2/17	Contig	Yale University	SAMN02472133	GCA_000203755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/203/755/GCA_000203755.2_ASM20375v2	21551297	ND6012
Helicobacter pylori	210	PRJDB4296	362565	Proteobacteria	delta/epsilon subdivisions	1.56617	38.9	chromosome:AP017355.1	-	1	1554	1520	1/18/17	1/18/17	Chromosome	"Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture"	SAMD00042483	GCA_002357755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/755/GCA_002357755.1_ASM235775v1	-	F94
Neisseria meningitidis	487	PRJNA244804	244804	Proteobacteria	Betaproteobacteria	2.12723	51.6	-	JMCP01	83	2478	2099	7/20/15	3/21/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02729082	GCA_001183485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/485/GCA_001183485.1_Nm320501	25989189	320501
Streptococcus pyogenes ABC020044188	1439133	PRJNA233164	233164	Terrabacteria group	Firmicutes	1.90612	38.5	-	JJGU01	10	1991	1871	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567513	GCA_000630545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/545/GCA_000630545.1_Stre_pyog_ABC020044188_V1	-	ABC020044188
Leptospira interrogans serovar Copenhageni str. Fiocruz LV4217	1291342	PRJNA189009	189009	Spirochaetes	Spirochaetia	4.61136	35	-	AOVH01	163	4126	3759	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920589	GCA_000343755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/755/GCA_000343755.1_CA_glsol147	-	Fiocruz LV4217
Bacillus anthracis	1392	PRJNA336484	336484	Terrabacteria group	Firmicutes	5.36642	35.1	-	MVKB01	71	5990	5652	3/13/17	3/15/17	Contig	National Center for Disease Control and Public Health (NCDC) of Georgia	SAMN05511418	GCA_002025265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/265/GCA_002025265.1_ASM202526v1	-	Ba-8785/92-Geo
Shigella flexneri Shi06HN378	1434137	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.42464	50.5	-	AZOP01	296	4915	4237	1/29/14	2/23/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437372	GCA_000565685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/685/GCA_000565685.1_ASM56568v1	-	Shi06HN378
Pseudomonas aeruginosa	287	PRJEB5488	259850	Proteobacteria	Gammaproteobacteria	6.76245	65.9	chromosome I:NZ_HG974234.1/HG974234.1	-	1	6493	6203	8/28/14	3/16/17	Chromosome	IGH	SAMEA3139100	GCA_000750905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/905/GCA_000750905.1_PSE305	25475851	PSE305
Acinetobacter baumannii NIPH 410	1217634	PRJNA183248	183248	Proteobacteria	Gammaproteobacteria	4.04731	39	-	ATGJ01	15	3984	3724	6/21/13	3/15/17	Scaffold	Broad Institute	SAMN01828139	GCA_000413915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/915/GCA_000413915.1_Acin_baum_NIPH_410_V1	-	NIPH 410
Streptococcus agalactiae CCUG 39096 A	1154816	PRJNA86241	86241	Terrabacteria group	Firmicutes	2.09762	35.2	-	ALQT01	21	2161	2059	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991104	GCA_000288855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/855/GCA_000288855.1_ASM28885v1	-	CCUG 39096 A
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.08513	41.1	-	CELN01	199	2109	1940	2/20/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234014	GCA_000936145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/145/GCA_000936145.1_Velvet_assembly	-	S15R
Pseudomonas syringae pv. actinidifoliorum	1674924	PRJNA287874	287874	Proteobacteria	Gammaproteobacteria	6.24504	58.7	-	LJFL01	206	5809	5450	1/5/16	3/27/17	Contig	INRA	SAMN03788034	GCA_001497455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/455/GCA_001497455.1_ASM149745v1	-	CFBP8161
Legionella pneumophila	446	PRJNA281281	281281	Proteobacteria	Gammaproteobacteria	3.598	38.3	-	LBAO01	49	3300	3138	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03486859	GCA_001582695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/695/GCA_001582695.1_ASM158269v1	26888563	ATCC 33216
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.76939	50.8	-	NQDJ01	95	4958	4628	8/11/17	8/15/17	Contig	JCVI	SAMN07450662	GCA_002248195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/195/GCA_002248195.1_ASM224819v1	-	ECH+21
Bacteroides fragilis str. Korea 419	1339269	PRJNA206100	206100	FCB group	Bacteroidetes/Chlorobi group	7.28643	43	-	JGDW01	246	6299	6192	3/20/14	3/20/14	Contig	IGS	SAMN02363658	GCA_000599205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/205/GCA_000599205.1_ASM59920v1	-	Korea 419
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.70083	67.2	-	MUTN01	96	7188	6887	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001914	GCA_001992445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/445/GCA_001992445.1_ASM199244v1	-	VC12821
Burkholderia pseudomallei	28450	PRJNA244418	244418	Proteobacteria	Betaproteobacteria	7.25343	68	-	JOTV01	3	7517	6894	9/23/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02863979	GCA_000757175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/175/GCA_000757175.1_BGQ	25414490	BGQ
Chlamydia trachomatis D(s)2923	573237	PRJNA32539	32539	PVC group	Chlamydiae	1.04276	41.3	chromosome:NZ_ACFJ01000001.1/ACFJ01000001.1	ACFJ01	1	967	900	1/30/09	3/22/17	Chromosome	Oregon State University	SAMN02470775	GCA_000174055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/055/GCA_000174055.1_ASM17405v1	-	-
Bacillus thuringiensis serovar aizawai	1433	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.17893	35	-	NFDX01	185	6681	6255	5/17/17	6/16/17	Contig	Huazhong Agricultural University	SAMN05934548	GCA_002147235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/235/GCA_002147235.1_ASM214723v1	-	BGSC 4J4
Vibrio cholerae HC-72A2	1000953	PRJNA64675	64675	Proteobacteria	Gammaproteobacteria	4.02842	47.5	-	AGUY02	94	3829	3679	12/10/12	3/23/17	Scaffold	Institute for Genome Sciences	SAMN00262576	GCA_000327205.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/205/GCA_000327205.3_ASM32720v3	-	HC-72A2
Clostridioides difficile CD196	645462	PRJNA85773	85773	Terrabacteria group	Firmicutes	3.60028	28.5	-	AVIE01	999	3453	3236	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766601	GCA_000449605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/605/GCA_000449605.2_ASM44960v2	-	CD196
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.85555	32.3	-	MRJY01	110	1987	1551	4/19/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773904	GCA_002100565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/565/GCA_002100565.1_ASM210056v1	28348839	FDC432
Brucella abortus F6/05-2	1160180	PRJNA173574	173574	Proteobacteria	Alphaproteobacteria	3.27906	57.2	-	AQMH01	12	3356	3114	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811178	GCA_000365765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/765/GCA_000365765.1_Bruc_abor_F6_05-2_V1	-	F6/05-2
Xanthomonas oryzae pv. oryzae	64187	PRJNA269465	269465	Proteobacteria	Gammaproteobacteria	4.24191	63.9	-	JXGJ01	420	4182	3403	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252561	GCA_001928775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/775/GCA_001928775.1_ASM192877v1	-	IXO414
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.97811	38	-	MLMK01	534	2125	1766	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297050	GCA_001868425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/425/GCA_001868425.1_ASM186842v1	27118061	AWRIB335
Vibrio parahaemolyticus S167	1394700	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.16099	45.3	-	AWHM01	484	4873	4671	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02339014	GCA_000489135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/135/GCA_000489135.1_S167	-	S167
Bacillus subtilis	1423	PRJNA320353	320353	Terrabacteria group	Firmicutes	4.11893	43.6	-	LYDW01	288	4339	4043	6/9/16	3/28/17	Contig	Fatima Jinnah Women University	SAMN04932709	GCA_001660605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/605/GCA_001660605.1_ASM166060v1	-	MB418
Staphylococcus equorum	246432	PRJNA306198	306198	Terrabacteria group	Firmicutes	2.93052	32.8413	chromosome:NZ_CP013714.1/CP013714.1; plasmid pC2014-1:NZ_CP013715.1/CP013715.1; plasmid pC2014-2:NZ_CP013716.1/CP013716.1; plasmid pC2014-3:NZ_CP013717.1/CP013717.1; plasmid pC2014-4:NZ_CP013718.1/CP013718.1; plasmid pC2014-5:NZ_CP013719.1/CP013719.1	-	6	2847	2625	7/8/16	4/5/17	Complete Genome	Shinansan University	SAMN04363544	GCA_001682235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/235/GCA_001682235.1_ASM168223v1	-	C2014
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	4.20146	27.9	-	LFON01	70	4153	3920	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779988	GCA_001573255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/255/GCA_001573255.1_ASM157325v1	26939550	An436
Enterococcus faecalis EnGen0071	1151207	PRJNA85665	85665	Terrabacteria group	Firmicutes	2.92486	37.6	-	AIJF01	6	2977	2805	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00792313	GCA_000390905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/905/GCA_000390905.1_Ente_faec_7430416-3_V1	-	7430416-3
Streptococcus mutans SM1	857108	PRJNA49847	49847	Terrabacteria group	Firmicutes	1.99493	36.7	-	AHTD01	114	1958	1871	2/11/13	3/23/17	Contig	Cornell University	SAMN02428981	GCA_000339575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/575/GCA_000339575.1_ASM33957v1	23228887	SM1
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.13528	52.6	-	CQMQ01	78	2494	2176	3/22/15	4/11/17	Contig	SC	SAMEA1690363	GCA_001110045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/045/GCA_001110045.1_8289_2_64	-	GCGS064
Enterococcus faecium EnGen0001	1138898	PRJNA82447	82447	Terrabacteria group	Firmicutes	2.77747	38.4	-	AHWZ01	19	2758	2488	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779810	GCA_000321805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/805/GCA_000321805.1_Ente_faec_E1575_V1	-	E1575
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.77976	66.2	-	JVIE01	33	4343	4234	7/10/15	7/20/16	Scaffold	University of Washington	SAMN03197602	GCA_001071045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/045/GCA_001071045.1_ASM107104v1	26230489	411_SMAL
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12972	41.2	-	CVZW01	75	2066	1889	6/24/15	3/26/17	Contig	SC	SAMEA1032881	GCA_001177065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/065/GCA_001177065.1_6903_2_7	-	EQUI0058
Pasteurella multocida subsp. multocida	44283	PRJNA355236	355236	Proteobacteria	Gammaproteobacteria	2.43104	40.2	-	MTEE01	36	2365	2253	3/8/17	3/11/17	Scaffold	INRA	SAMN06140944	GCA_002023935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/935/GCA_002023935.1_ASM202393v1	-	CIRMBP-0817
Lactobacillus rhamnosus	47715	PRJNA348789	348789	Terrabacteria group	Firmicutes	3.14642	46.6	-	MLKC01	69	3225	2893	10/21/16	4/5/17	Scaffold	The University of Queensland	SAMN05915698	GCA_001831225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/225/GCA_001831225.1_ASM183122v1	-	ASCC 3016
Brucella melitensis R3/07-2	1160218	PRJNA173578	173578	Proteobacteria	Alphaproteobacteria	3.30065	57.2	-	AQNM01	10	3377	3126	4/16/13	4/1/17	Contig	Broad Institute	SAMN00811215	GCA_000367025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/025/GCA_000367025.1_Bruc_meli_R3_07-2_V1	-	R3/07-2
Staphylococcus aureus	1280	PRJDB4467	308193	Terrabacteria group	Firmicutes	2.91635	32.8347	chromosome Unknown:NZ_AP017320.1/AP017320.1; plasmid pMI:NZ_AP017321.1/AP017321.1	-	2	3063	2895	1/16/16	3/5/17	Complete Genome	Juntendo University	SAMD00044982	GCA_001548415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/415/GCA_001548415.1_ASM154841v1	26988042	MI
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.4662	53.5	-	LSWS01	37	2380	2204	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497018	GCA_002202765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/765/GCA_002202765.1_S76	-	5073
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.79871	47.2	-	CWGN01	60	4580	4369	6/26/15	3/26/17	Scaffold	SC	SAMEA980150	GCA_001174985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/985/GCA_001174985.1_5749_7_3	-	YE39/03
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.18509	59.5	-	JVJP01	197	4922	4747	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197565	GCA_001064725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/725/GCA_001064725.1_ASM106472v1	26230489	374_SMAR
Lactobacillus plantarum	1590	PRJNA313526	313526	Terrabacteria group	Firmicutes	3.19695	45.1	-	LUWB01	72	3108	2902	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04525211	GCA_001639445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/445/GCA_001639445.1_ASM163944v1	-	Nizo1839
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.71148	31.3	-	CUTR01	18	1775	1677	3/31/15	3/18/17	Contig	SC	SAMEA1401731	GCA_001232305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/305/GCA_001232305.1_7213_3_34	-	OXC6577
Burkholderia sp. K24	1472716	PRJNA240913	240913	Proteobacteria	Betaproteobacteria	8.34418	61.8	-	JMIK01	33	7506	7271	6/27/14	4/9/17	Scaffold	Korea Basic Science Institute	SAMN02680269	GCA_000714855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/855/GCA_000714855.1_Burkholderia_sp._K24_draft01	25477408	K24
Cutibacterium acnes	1747	PRJNA323688	323688	Terrabacteria group	Actinobacteria	2.47212	60	-	LZCR01	22	2503	2357	6/10/16	4/5/17	Scaffold	Aarhus University	SAMN05185391	GCA_001660955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/955/GCA_001660955.1_ASM166095v1	-	26.1.L1
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.54104	32.7	-	CUDC01	93	2544	2402	3/31/15	3/26/17	Scaffold	SC	SAMEA1035033	GCA_001225445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/445/GCA_001225445.1_7067_4_44	-	51-16
Enterobacter cloacae	550	PRJNA319130	319130	Proteobacteria	Gammaproteobacteria	4.63707	55.8	-	LXPZ01	40	4489	4301	5/10/16	3/28/17	Contig	University of Florida	SAMN04943309	GCA_001641585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/585/GCA_001641585.1_ASM164158v1	-	KCJK1725
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.44231	56.9	-	MCOD01	70	4316	4096	9/20/16	4/5/17	Scaffold	FDA/CFSAN	SAMN04329632	GCA_001735605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/735/605/GCA_001735605.1_ASM173560v1	-	MOD1-1121-73
Mycobacterium abscessus subsp. abscessus	1185650	PRJNA338076	338076	Terrabacteria group	Actinobacteria	5.11828	64.2	-	MVDX01	43	5100	4961	3/27/17	6/20/17	Contig	National University of Singapore	SAMN06240305	GCA_002072635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/635/GCA_002072635.1_ASM207263v1	28522728	Bamboo
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.93197	67.1	-	LPCD01	204	7294	6832	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449392	GCA_001528345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/345/GCA_001528345.1_ASM152834v1	-	MSMB2014WGS
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.03458	38.7	-	NGEJ01	115	3924	3716	5/15/17	5/23/17	Contig	JCVI	SAMN06837805	GCA_002137855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/855/GCA_002137855.1_ASM213785v1	-	PR348
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA271006	271006	Proteobacteria	Gammaproteobacteria	5.17202	55.2	-	JZKV01	140	5113	4855	3/30/15	3/25/17	Contig	JCVI	SAMN03277198	GCA_000966125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/125/GCA_000966125.1_ASM96612v1	-	CIDEIMsCOL11
Klebsiella aerogenes	548	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.21382	55	-	NEYW01	53	5148	4910	6/9/17	6/12/17	Contig	JCVI	SAMN06812617	GCA_002184625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/625/GCA_002184625.1_ASM218462v1	-	ARLG-2971
Pseudomonas sp. Ag1	1197727	PRJNA168001	168001	Proteobacteria	Gammaproteobacteria	7.25236	60.5	-	AKVH01	113	6721	6562	7/12/12	5/19/17	Contig	New Mexico State University	SAMN02470678	GCA_000278565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/565/GCA_000278565.1_ASM27856v1	22965079	Ag1
Streptomyces sp. Root1319	1736454	PRJNA297942	297942	Terrabacteria group	Actinobacteria	6.74429	71.3	-	LMEU01	30	5850	5563	11/2/15	3/13/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155723	GCA_001426615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/615/GCA_001426615.1_Root1319	26633631	Root1319
Bacillus sp. LF1	1499688	PRJEB6482	251851	Terrabacteria group	Firmicutes	5.60006	38.1	-	CVRB01	10	5377	5096	5/23/15	7/29/17	Contig	URMITE	SAMEA3402918	GCA_001048695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/695/GCA_001048695.1_PRJEB8581_assembly_1	-	LF1
Acinetobacter sp. 1281984	1310795	PRJNA194871	194871	Proteobacteria	Gammaproteobacteria	4.07188	38.8	-	JFXD01	50	3909	3662	3/11/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02415049	GCA_000588595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/595/GCA_000588595.1_ASM58859v1	-	1281984
Clostridium sp. CAG:571	1262822	PRJEB940	206815	Terrabacteria group	Firmicutes	1.54294	25.9	-	CBBG01	22	1650	1620	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138588	GCA_000434015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/015/GCA_000434015.1_MGS571	-	-
Sphingomonas sp. JGI 0001002-I20	1094943	PRJNA176076	176076	Proteobacteria	Alphaproteobacteria	1.38265	65.5	-	AUOO02	91	-	-	7/16/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440700	GCA_000464255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/255/GCA_000464255.2_ASM46425v2	-	JGI 0001002-I20
Rhodococcus sp. 05-2254-4	2022492	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.91911	64.6	-	NOZH01	30	5615	5465	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376362	GCA_002259035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/035/GCA_002259035.1_ASM225903v1	-	05-2254-4
Enterobacter cloacae complex sp. GN04363	1870955	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.00533	56	-	LRCR01	60	4873	4651	1/19/16	4/11/17	Contig	JCVI	SAMN04407788	GCA_001518635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/635/GCA_001518635.1_ASM151863v1	-	GN04363
Staphylococcus sp. HMSC061C10	1715056	PRJNA296184	296184	Terrabacteria group	Firmicutes	2.55406	33.6	-	LTQK01	56	2431	2351	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498585	GCA_001836725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/725/GCA_001836725.1_ASM183672v1	-	HMSC061C10
Corynebacterium sp. HMSC075F02	1739424	PRJNA300074	300074	Terrabacteria group	Actinobacteria	2.42012	58.8	-	LTNP01	30	2108	2031	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498683	GCA_001838335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/335/GCA_001838335.1_ASM183833v1	-	HMSC075F02
Streptococcus sp. GMD6S	1169675	PRJNA157421	157421	Terrabacteria group	Firmicutes	2.26436	40.8	-	AJRH01	393	2323	2082	9/14/12	4/7/17	Contig	Los Alamos National Laboratory	SAMN02470280	GCA_000297015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/015/GCA_000297015.1_ASM29701v1	23493677	GMD6S
Mycobacterium sp. ACS4054	1834119	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.15511	68.9	-	LZHV01	82	4860	4707	6/17/16	4/12/17	Contig	JCVI	SAMN04634268	GCA_001667275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/275/GCA_001667275.1_ASM166727v1	-	ACS4054
Paenibacillus sp. VT-16-81	1962644	PRJNA376785	376785	Terrabacteria group	Firmicutes	7.2283	46.2	-	MWZC01	1176	6374	6175	3/14/17	3/16/17	Scaffold	Human Microbiology Institute	SAMN06446694	GCA_002027255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/255/GCA_002027255.1_ASM202725v1	-	VT-16-81
Prochlorococcus sp. scB241_529J16	1471467	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.951023	31.8	-	JFLR01	384	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671338	GCA_000635455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/455/GCA_000635455.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Rhizobium sp. Pop5	1223565	PRJNA172900	172900	Proteobacteria	Alphaproteobacteria	6.49916	60.9	-	AMCP01	1413	7063	7021	9/10/12	1/8/14	Contig	Center for Genomic Sciences	SAMN02469420	GCA_000295895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/895/GCA_000295895.1_ASM29589v1	-	Pop5
Staphylococcus argenteus	985002	PRJEB20633	390605	Terrabacteria group	Firmicutes	2.91422	32.3	-	FXVK01	86	2975	2771	6/15/17	7/5/17	Scaffold	Geogentics	SAMEA104034155	GCA_900183955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/955/GCA_900183955.1_M3040	-	-
Staphylococcus argenteus	985002	PRJEB20633	390605	Terrabacteria group	Firmicutes	2.8092	32.3	-	FXWE01	79	2807	2627	6/15/17	7/5/17	Scaffold	Geogentics	SAMEA104034157	GCA_900183965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/965/GCA_900183965.1_O-2	-	-
Rhizobium sp. JGI 0001005-H05	1157685	PRJNA169807	169807	Proteobacteria	Alphaproteobacteria	1.23335	59.6	-	AQXA01	198	-	-	4/20/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441050	GCA_000375385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/385/GCA_000375385.1_ASM37538v1	-	JGI 0001005-H05
Prochlorococcus sp. scB241_529O19	1471468	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.30564	31.7	-	JFLS01	149	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671339	GCA_000635475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/475/GCA_000635475.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Paenibacillus sp. SSG-1	1443669	PRJNA330893	330893	Terrabacteria group	Firmicutes	7.56317	53.1	-	MBRK01	8	6930	6695	7/25/17	7/28/17	Scaffold	Sichuan University	SAMN05429002	GCA_002224835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/835/GCA_002224835.1_ASM222483v1	28720902	SSG-1
Mycobacterium sp. 852002-10029_SCH5224772	1834083	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.25456	67.3	-	LZHT01	135	4964	4722	6/17/16	4/12/17	Contig	JCVI	SAMN04696135	GCA_001667315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/315/GCA_001667315.1_ASM166731v1	-	852002-10029_SCH5224772
Streptococcus sp. GMD3S	1169672	PRJNA157415	157415	Terrabacteria group	Firmicutes	2.03327	41.1	-	AJRC02	81	2013	1908	9/19/12	4/8/17	Contig	Los Alamos National Laboratory	SAMN02470258	GCA_000298695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/695/GCA_000298695.2_ASM29869v2	23493677	GMD3S
Corynebacterium sp. MC3	1720193	PRJEB15651	347306	Terrabacteria group	Actinobacteria	2.45236	60.5	-	FMSX01	17	2310	2152	10/7/16	4/13/17	Scaffold	URMITE	SAMEA4490805	GCA_900099485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/485/GCA_900099485.1_PRJEB15651	-	MC3
Staphylococcus sp. HMSC061F10	1715106	PRJNA296234	296234	Terrabacteria group	Firmicutes	2.42952	32.6	-	LWQD01	137	2372	2264	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498612	GCA_001836755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/755/GCA_001836755.1_ASM183675v1	-	HMSC061F10
Enterobacter cloacae complex sp. GN04826	1820020	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.06451	56.1	-	LVTT01	234	5145	4748	4/25/16	4/12/17	Contig	JCVI	SAMN04578341	GCA_001631105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/105/GCA_001631105.1_ASM163110v1	-	GN04826
Rhodococcus sp. 05-2256-B3	2022490	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.76575	64.4	-	NOYY01	42	5466	5313	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376360	GCA_002259065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/065/GCA_002259065.1_ASM225906v1	-	05-2256-B3
Sphingomonas sp. JGI 0001003-H15	1094945	PRJNA176077	176077	Proteobacteria	Alphaproteobacteria	0.590467	65.8	-	AUOP02	46	-	-	7/16/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441134	GCA_000464275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/275/GCA_000464275.2_ASM46427v2	-	JGI 0001003-H15
Clostridium sp. CAG:452	1262810	PRJEB888	206861	Terrabacteria group	Firmicutes	1.24826	28.3	-	CBGT01	17	1348	1317	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138589	GCA_000434035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/035/GCA_000434035.1_MGS452	-	-
Acinetobacter sp. 25977_10	1310914	PRJNA194991	194991	Proteobacteria	Gammaproteobacteria	4.12991	38.7	-	JFVQ01	187	4202	3787	3/11/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02570335	GCA_000589115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/115/GCA_000589115.1_ASM58911v1	-	25977_10
Bacillus sp. Co1-6	1806507	PRJEB9155	286865	Terrabacteria group	Firmicutes	3.92243	46.6	-	CVPA01	1	3898	3657	6/12/15	4/10/17	Contig	TUGRAZ	SAMEA3356669	GCA_001175005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/005/GCA_001175005.1_Co1-6	-	Co1-6
Streptomyces sp. Root55	1736554	PRJNA297942	297942	Terrabacteria group	Actinobacteria	8.05495	71	-	LMFT01	40	7059	6628	11/2/15	3/13/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155823	GCA_001427245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/245/GCA_001427245.1_Root55	26633631	Root55
Pseudomonas sp. GM16	1144322	PRJNA83067	83067	Proteobacteria	Gammaproteobacteria	6.55052	59.2	-	AKJV01	128	5903	5676	7/27/12	5/28/17	Contig	Oak Ridge National Lab	SAMN00839630	GCA_000282155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/155/GCA_000282155.1_Pseudomonas.strGM16_v1.0	23045501	GM16
Klebsiella aerogenes	548	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.27417	54.7	-	NEYY01	52	5285	5019	6/9/17	6/12/17	Contig	JCVI	SAMN06812619	GCA_002185345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/345/GCA_002185345.1_ASM218534v1	-	ARLG-2969
Enterobacter hormaechei subsp. oharae	301102	PRJNA271006	271006	Proteobacteria	Gammaproteobacteria	4.8522	55.1	-	JZKW01	118	4873	4597	3/30/15	3/25/17	Contig	JCVI	SAMN03277199	GCA_000966135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/135/GCA_000966135.1_ASM96613v1	-	CIDEIMsCOL12
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.01046	38.7	-	NGEH01	118	3946	3748	5/15/17	5/23/17	Contig	JCVI	SAMN06837808	GCA_002137885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/885/GCA_002137885.1_ASM213788v1	-	PR346
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.55671	67.3	-	LPCE01	112	6924	6542	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449393	GCA_001528365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/365/GCA_001528365.1_ASM152836v1	-	MSMB2016WGS
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.9278	63.4	-	DDHE01	54	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06457367	GCA_002352925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/925/GCA_002352925.1_ASM235292v1	28894102	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJNA354248	354248	Terrabacteria group	Actinobacteria	4.96744	64.1	-	MVHY01	25	4989	4847	4/11/17	4/13/17	Contig	San Raffaele Scientific Institute	SAMN06064247	GCA_002086375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/375/GCA_002086375.1_ASM208637v1	-	CCUG 48898
Cronobacter sakazakii	28141	PRJNA244728	244728	Proteobacteria	Gammaproteobacteria	4.47993	56.6	-	JMRI01	414	4412	3421	1/25/17	4/6/17	Scaffold	"Nottingham Trent University, UK"	SAMN02728371	GCA_001971035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/035/GCA_001971035.1_ASM197103v1	-	ATCC 29544
Enterobacter cloacae	550	PRJNA323402	323402	Proteobacteria	Gammaproteobacteria	4.43939	55.9	-	LZEN01	36	4292	4139	6/14/16	3/28/17	Contig	CSIR- National Environmental Engineering Research Institute	SAMN05212257	GCA_001662855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/855/GCA_001662855.1_ASM166285v1	-	ND22
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.48138	32.6	-	CUEN01	94	2431	2315	3/31/15	3/26/17	Scaffold	SC	SAMEA1035096	GCA_001225665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/665/GCA_001225665.1_7067_4_78	-	AB
Cutibacterium acnes	1747	PRJNA323688	323688	Terrabacteria group	Actinobacteria	2.47545	60	-	LZCP01	16	2493	2355	6/10/16	4/5/17	Scaffold	Aarhus University	SAMN05185388	GCA_001660965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/965/GCA_001660965.1_ASM166096v1	-	43.1.L1
Burkholderia sp. CQ001	1836045	PRJNA339502	339502	Proteobacteria	Betaproteobacteria	9.19259	66	-	MDTW01	387	8528	8017	9/6/16	4/13/17	Scaffold	Chongqing Medical University	SAMN05592161	GCA_001719665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/665/GCA_001719665.1_ASM171966v1	-	CQ001
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66047	31.4	-	CUPQ01	11	1719	1625	3/31/15	3/18/17	Contig	SC	SAMEA1010254	GCA_001232625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/625/GCA_001232625.1_7092_1_25	-	OXC6472
Lactobacillus plantarum	1590	PRJNA313531	313531	Terrabacteria group	Firmicutes	3.20442	44.9	-	LUWC01	189	3168	2846	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04525298	GCA_001639455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/455/GCA_001639455.1_ASM163945v1	-	Nizo1840
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.19954	59.5	-	JVIU01	79	4886	4766	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197586	GCA_001064835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/835/GCA_001064835.1_ASM106483v1	26230489	395_SMAR
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.63467	46.8	-	CWIR01	148	4445	3979	7/6/15	3/26/17	Scaffold	SC	SAMEA980138	GCA_001182105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/105/GCA_001182105.1_4976_7_10	-	YE519-36/88
Corynebacterium diphtheriae bv. mitis	1806053	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.3795	53.6	-	LSWU01	34	2345	2143	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496989	GCA_002202815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/815/GCA_002202815.1_S79	-	4010
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.83917	32.8345	chromosome:NZ_CP014064.1/CP014064.1; plasmid unnamed:NZ_CP014063.1/CP014063.1	-	2	2959	2794	2/11/16	3/5/17	Complete Genome	US Food and Drug Administration 	SAMN03996304	GCA_001558795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/795/GCA_001558795.1_ASM155879v1	-	FDAARGOS_159
Brucella melitensis UK19/04	1160223	PRJNA173591	173591	Proteobacteria	Alphaproteobacteria	3.29604	57.2	-	AQNN01	7	3377	3140	4/16/13	4/1/17	Contig	Broad Institute	SAMN00811217	GCA_000367045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/045/GCA_000367045.1_Bruc_meli_UK19_04_V1	-	UK19/04
Lactobacillus rhamnosus	47715	PRJNA348789	348789	Terrabacteria group	Firmicutes	2.89488	46.7	-	MLJZ01	25	2944	2765	10/21/16	4/5/17	Scaffold	The University of Queensland	SAMN05915695	GCA_001831235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/235/GCA_001831235.1_ASM183123v1	-	ASCC 3029
Pasteurella multocida subsp. septica	115545	PRJNA355236	355236	Proteobacteria	Gammaproteobacteria	2.33274	40.3	-	MTEF01	15	2246	2153	3/8/17	3/11/17	Scaffold	INRA	SAMN06140943	GCA_002023945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/023/945/GCA_002023945.1_ASM202394v1	-	CIRMBP-0783
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.13966	41.2	-	CWFF01	85	2069	1898	6/23/15	3/26/17	Contig	SC	SAMEA1032883	GCA_001177085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/085/GCA_001177085.1_6903_8_69	-	EQUI0214
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.77092	66.2	-	JVHW01	82	4335	4208	7/10/15	7/20/16	Scaffold	University of Washington	SAMN03197610	GCA_001071065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/065/GCA_001071065.1_ASM107106v1	26230489	419_SMAL
Enterococcus faecium EnGen0018	1138899	PRJNA82449	82449	Terrabacteria group	Firmicutes	2.7138	38.1	-	AHXA01	36	2702	2520	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779812	GCA_000321825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/825/GCA_000321825.1_Ente_faec_E1576_V1	-	E1576
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14775	52.4	-	CQIW01	75	2503	2195	3/23/15	4/11/17	Contig	SC	SAMEA1690475	GCA_001113865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/865/GCA_001113865.1_8727_8_27	-	GCGS123
Streptococcus mutans 8ID3	857153	PRJNA49757	49757	Terrabacteria group	Firmicutes	1.90874	36.9	-	AHRB01	100	1921	1850	2/11/13	3/23/17	Contig	Cornell University	SAMN02429079	GCA_000339595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/595/GCA_000339595.1_ASM33959v1	23228887	8ID3
Enterococcus faecalis EnGen0072	1151208	PRJNA85667	85667	Terrabacteria group	Firmicutes	2.91215	37.4	-	AIJG01	7	2959	2815	5/3/13	4/10/17	Scaffold	Broad Institute	SAMN00792314	GCA_000390925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/925/GCA_000390925.1_Ente_faec_7430821-4_V1	-	7430821-4
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.86451	28	-	LFRD01	80	3692	3560	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779946	GCA_001573295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/295/GCA_001573295.1_ASM157329v1	26939550	VPI 7124
Staphylococcus aureus subsp. aureus 55/2053	585143	PRJNA34891	34891	Terrabacteria group	Firmicutes	2.77737	32.8162	chromosome:NC_022113.1/CP002388.1; plasmid unnamed:NC_022126.1/CP002389.1	-	2	2878	2693	8/21/13	3/2/17	Complete Genome	Broad Institute	SAMN00103091	GCA_000160335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/335/GCA_000160335.2_ASM16033v2	-	55/2053
Bacillus subtilis subsp. subtilis	135461	PRJNA309052	309052	Terrabacteria group	Firmicutes	4.03575	43.9	-	LRFK01	20	4126	3963	6/10/16	3/28/17	Contig	Nanjing Agricultural University	SAMN04419588	GCA_001661555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/661/555/GCA_001661555.1_ASM166155v1	-	Y3
Vibrio parahaemolyticus S166	1394699	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.00591	45.4	-	AWHN01	522	4800	4594	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02339013	GCA_000489155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/155/GCA_000489155.1_S166	-	S166
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.93775	37.8	-	MLML01	624	2099	1714	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297051	GCA_001868435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/435/GCA_001868435.1_ASM186843v1	27118061	AWRIB336
Xanthomonas oryzae pv. oryzae	64187	PRJNA269466	269466	Proteobacteria	Gammaproteobacteria	4.38139	63.9	-	JXGK01	466	4406	3532	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252574	GCA_001928825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/825/GCA_001928825.1_ASM192882v1	-	IXO493
Brucella abortus F1/06 B1	1160191	PRJNA173613	173613	Proteobacteria	Alphaproteobacteria	3.28604	57.2	-	AQMD01	6	3375	3155	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811173	GCA_000365785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/785/GCA_000365785.1_Bruc_abor_F1_06-B1_V1	-	F1/06 B1
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.85883	32.3	-	MRJR01	95	1953	1560	4/19/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773917	GCA_002100585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/585/GCA_002100585.1_ASM210058v1	28348839	FSC031
Clostridioides difficile DA00275	1151358	PRJNA85891	85891	Terrabacteria group	Firmicutes	4.08008	28.6	-	AVKG01	86	3784	3624	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766675	GCA_000449625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/625/GCA_000449625.2_ASM44962v2	-	DA00275
Vibrio cholerae HC-78A1	992009	PRJNA64025	64025	Proteobacteria	Gammaproteobacteria	3.93777	47.8	-	AGUZ02	133	3751	3528	12/10/12	3/23/17	Scaffold	Institute for Genome Sciences	SAMN00262223	GCA_000327225.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/225/GCA_000327225.3_ASM32722v3	-	HC-78A1
Bacillus thuringiensis serovar tolworthi	1442	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.81928	34.8	-	NFDZ01	272	7318	6796	5/17/17	6/15/17	Contig	Huazhong Agricultural University	SAMN05934550	GCA_002147245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/245/GCA_002147245.1_ASM214724v1	-	BGSC 4L3
Chlamydia trachomatis L2tet1	658599	PRJNA39293	39293	PVC group	Chlamydiae	1.07662	41.5	chromosome:NZ_ACUI01000001.1/ACUI01000001.1	ACUI01	1	998	925	1/26/10	3/22/17	Chromosome	Oregon State University	SAMN02470776	GCA_000175515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/515/GCA_000175515.1_ASM17551v1	-	L2tet1
Burkholderia pseudomallei	28450	PRJNA244420	244420	Proteobacteria	Betaproteobacteria	7.08279	68.2	-	JOTW01	3	7297	6801	9/23/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02864155	GCA_000757185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/185/GCA_000757185.1_BGS	25414490	BGS
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.71662	67.2	-	MUTP01	75	7225	6929	2/10/17	4/2/17	Contig	University of British Columbia	SAMN05001916	GCA_001992475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/475/GCA_001992475.1_ASM199247v1	-	VC13307
Bacteroides fragilis str. S6L5	1339318	PRJNA206161	206161	FCB group	Bacteroidetes/Chlorobi group	6.38861	42.6	-	JGVC01	230	5936	5806	3/26/14	3/26/14	Contig	IGS	SAMN02363972	GCA_000601015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/015/GCA_000601015.1_ASM60101v1	-	S6L5
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.16059	50.5	-	NQDP01	173	5476	5037	8/11/17	8/15/17	Contig	JCVI	SAMN07450656	GCA_002248305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/305/GCA_002248305.1_ASM224830v1	-	ECPUTH05
Legionella pneumophila	446	PRJNA281282	281282	Proteobacteria	Gammaproteobacteria	3.598	38.3	-	LBAP01	49	3300	3138	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03486863	GCA_001582705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/705/GCA_001582705.1_ASM158270v1	26888563	SZ2012007
Pseudomonas syringae pv. actinidifoliorum	1674924	PRJNA287880	287880	Proteobacteria	Gammaproteobacteria	6.26167	58.7	-	LJFN01	256	5825	5463	1/5/16	3/27/17	Contig	INRA	SAMN03788139	GCA_001497465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/465/GCA_001497465.1_ASM149746v1	-	CFBP8180
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.10146	41.1	-	CEII01	119	2084	1941	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234027	GCA_000936285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/285/GCA_000936285.1_Velvet_assembly	-	S16F
Streptococcus agalactiae CCUG 44077	1154817	PRJNA86247	86247	Terrabacteria group	Firmicutes	2.10082	35.3	-	ALQU01	54	2195	2067	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991103	GCA_000288875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/875/GCA_000288875.1_ASM28887v1	-	CCUG 44077
Acinetobacter baumannii LAC-4	1455315	PRJNA237445	237445	Proteobacteria	Gammaproteobacteria	3.96109	39	-	JICJ01	13	3828	3576	4/8/14	3/16/17	Scaffold	Broad Institute	SAMN02628531	GCA_000623015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/015/GCA_000623015.1_Acin_baum_LAC-4_V1	-	LAC-4
Pseudomonas aeruginosa	287	PRJNA257157	257157	Proteobacteria	Gammaproteobacteria	7.06088	66.1	chromosome:NZ_CP021380.1/CP021380.1	-	1	6807	6581	5/19/17	7/12/17	Chromosome	Instituto Oswaldo Cruz	SAMN02947975	GCA_000763245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/245/GCA_000763245.2_ASM76324v2	25466623	CCBH4851
Shigella flexneri Shi06HN016	1434138	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.53607	50.5	-	AZOQ01	299	5064	4362	1/29/14	2/23/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437373	GCA_000565705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/705/GCA_000565705.1_ASM56570v1	-	Shi06HN016
Bacillus anthracis	1392	PRJNA336484	336484	Terrabacteria group	Firmicutes	5.36727	35.2	-	MVKC01	73	5994	5653	3/13/17	3/15/17	Contig	National Center for Disease Control and Public Health (NCDC) of Georgia	SAMN05511417	GCA_002025275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/275/GCA_002025275.1_ASM202527v1	-	Ba-8784/92-Geo
Leptospira interrogans serovar Copenhageni str. Fiocruz LV4174	1291343	PRJNA189010	189010	Spirochaetes	Spirochaetia	4.62565	35	-	AOVG01	165	4128	3763	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920590	GCA_000343775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/775/GCA_000343775.1_CA_glsol148	-	Fiocruz LV4174
Streptococcus pyogenes ABC020044173	1439132	PRJNA233163	233163	Terrabacteria group	Firmicutes	1.83563	38.4	-	JJGV01	4	1898	1784	4/14/14	4/10/17	Scaffold	Broad Institute	SAMN02567512	GCA_000630565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/565/GCA_000630565.1_Stre_pyog_ABC020044173_V1	-	ABC020044173
Neisseria meningitidis	487	PRJNA244808	244808	Proteobacteria	Betaproteobacteria	2.12185	51.5	-	JMCQ01	79	2455	1960	7/20/15	4/11/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02729089	GCA_001183495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/495/GCA_001183495.1_Nm320503	25989189	320503
Helicobacter pylori	210	PRJDB4296	362565	Proteobacteria	delta/epsilon subdivisions	1.61776	38.8	chromosome:AP017356.1	-	1	1589	1554	1/18/17	1/18/17	Chromosome	"Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture"	SAMD00042484	GCA_002357775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/775/GCA_002357775.1_ASM235777v1	-	MKF10
Streptococcus pneumoniae PT8114	1001744	PRJNA64977	64977	Terrabacteria group	Firmicutes	2.0099	39.6	-	AFCB01	423	2195	1981	4/11/11	3/9/17	Contig	Yale University	SAMN02472134	GCA_000203775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/203/775/GCA_000203775.2_ASM20377v2	21551297	PT8114
Staphylococcus aureus	1280	PRJNA300829	300829	Terrabacteria group	Firmicutes	3.11428	32.8028	chromosome:NZ_CP013957.1/CP013957.1; plasmid pV521:NZ_CP013958.1/CP013958.1	-	2	3312	3091	5/9/16	3/6/17	Complete Genome	Catholic university of Korea	SAMN04219577	GCA_001641025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/025/GCA_001641025.1_ASM164102v1	-	V521
Mycobacterium tuberculosis X122	747368	PRJNA46667	46667	Terrabacteria group	Actinobacteria	4.40471	65.2994	chromosome:NZ_CM001044.1/CM001044.1	ADNG01	1	4320	4086	11/30/10	5/19/17	Chromosome	Texas A&M University	SAMN02471089	GCA_000184025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/184/025/GCA_000184025.1_ASM18402v1	21110864	X122
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.868	38	-	FFIY01	18	1882	1760	2/9/16	3/27/17	Scaffold	SC	SAMEA2674733	GCA_900027005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/005/GCA_900027005.1_14412_4_18	-	2842STDY5882046
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.24992	69	-	BDNZ01	413	5039	4664	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076676	GCA_002089715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/715/GCA_002089715.1_ASM208971v1	28045086	NN-108
Lactococcus lactis subsp. lactis	1360	PRJNA277804	277804	Terrabacteria group	Firmicutes	2.50715	35	-	LAVD01	116	2657	2657	6/1/15	6/1/15	Contig	Teagasc	SAMN03396773	GCA_001017475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/475/GCA_001017475.1_ASM101747v1	-	DPC6853
Bacillus cereus CER057	1053198	PRJNA70361	70361	Terrabacteria group	Firmicutes	5.62838	35.4	-	AHDS01	7	5925	5568	8/15/12	6/15/17	Scaffold	Broad Institute	SAMN02596830	GCA_000291335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/335/GCA_000291335.1_Baci_cere_CER057_V1	-	CER057
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.42798	32	-	JVUN01	116	2359	2270	7/10/15	3/26/17	Contig	University of Washington	SAMN03197281	GCA_001070505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/505/GCA_001070505.1_ASM107050v1	26230489	1306.rep2_SEPI
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.76959	32.8	chromosome:CP023500.1	-	1	2870	2731	9/28/17	9/28/17	Complete Genome	US Food and Drug Administration 	SAMN07312456	GCA_002386245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/245/GCA_002386245.1_ASM238624v1	-	FDAARGOS_412
Pseudomonas fluorescens	294	PRJNA339171	339171	Proteobacteria	Gammaproteobacteria	6.1343	60.5	-	MSDK01	43	5692	5498	3/7/17	3/10/17	Scaffold	USDA	SAMN05589723	GCA_002022335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/335/GCA_002022335.1_ASM202233v1	-	A3422A
Yersinia pestis PY-05	992131	PRJNA64289	64289	Proteobacteria	Gammaproteobacteria	4.68527	47.5	-	AKRQ01	479	4541	4226	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141452	GCA_000268345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/345/GCA_000268345.1_ASM26834v1	-	PY-05
Staphylococcus aureus	1280	PRJNA338099	338099	Terrabacteria group	Firmicutes	2.80717	32.8	chromosome:NZ_CP017115.1/CP017115.1	-	1	2916	2740	6/27/17	6/29/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN05520967	GCA_002209325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/325/GCA_002209325.1_ASM220932v1	-	FORC_045
Staphylococcus aureus	1280	PRJNA319679	319679	Terrabacteria group	Firmicutes	3.05006	32.8	chromosome:NZ_CP015447.1/CP015447.1	-	1	3228	3043	4/18/17	4/21/17	Complete Genome	University of Calgary	SAMN04903357	GCA_002097595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/595/GCA_002097595.1_ASM209759v1	-	M92
Staphylococcus aureus	1280	PRJNA345240	345240	Terrabacteria group	Firmicutes	2.87885	32.8	chromosome:NZ_CP019590.1/CP019590.1	-	1	3026	2870	4/13/17	4/17/17	Complete Genome	University of Calgary	SAMN05860146	GCA_002088995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/995/GCA_002088995.1_ASM208899v1	-	C2406
Staphylococcus aureus	1280	PRJNA381486	381486	Terrabacteria group	Firmicutes	2.8744	32.8	chromosome:NZ_CP020619.1/CP020619.1	-	1	3020	2864	4/11/17	4/13/17	Complete Genome	Walter Reed Army Institute of Research	SAMN06677988	GCA_002085525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/525/GCA_002085525.1_ASM208552v1	-	JE2
Staphylococcus aureus	1280	PRJNA301211	301211	Terrabacteria group	Firmicutes	2.71926	32.8	chromosome:NZ_CP013132.1/CP013132.1	-	1	2786	2623	11/16/16	3/6/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN04243988	GCA_001879545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/545/GCA_001879545.1_ASM187954v1	-	FORC_026
Staphylococcus aureus subsp. aureus	46170	PRJNA321119	321119	Terrabacteria group	Firmicutes	2.74854	32.8	chromosome:CP016856.1	-	1	2834	2755	8/31/16	8/31/16	Complete Genome	Uniformed Services University	SAMN04966148	GCA_001717665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/665/GCA_001717665.1_ASM171766v1	-	2148.N
Yersinia pestis PY-06	992132	PRJNA64291	64291	Proteobacteria	Gammaproteobacteria	4.78794	47.5	-	AKRR01	524	4674	4317	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141453	GCA_000268365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/365/GCA_000268365.1_ASM26836v1	-	PY-06
Pseudomonas fluorescens	294	PRJNA339171	339171	Proteobacteria	Gammaproteobacteria	6.14293	60.5	-	MSDJ01	29	5691	5496	3/7/17	3/11/17	Scaffold	USDA	SAMN05589722	GCA_002022365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/365/GCA_002022365.1_ASM202236v1	-	G2Y
Staphylococcus aureus	1280	PRJNA285271	285271	Terrabacteria group	Firmicutes	2.84809	32.8	chromosome:NZ_CP011685.1/CP011685.1	-	1	2970	2802	5/9/16	3/6/17	Complete Genome	"The First Affiliated Hospital of College of Medicine, Zhejiang University"	SAMN03742530	GCA_001640885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/885/GCA_001640885.1_ASM164088v1	-	ZJ5499
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.53831	31.9	-	JVRC01	86	2498	2399	7/10/15	3/26/17	Contig	University of Washington	SAMN03197370	GCA_001070735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/735/GCA_001070735.1_ASM107073v1	26230489	18_SEPI
Bacillus cereus BAG6X1-2	1053195	PRJNA70355	70355	Terrabacteria group	Firmicutes	5.11668	35.5	-	AHDP01	7	5493	5011	8/15/12	6/15/17	Scaffold	Broad Institute	SAMN02596827	GCA_000291355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/355/GCA_000291355.1_Baci_cere_BAG6X1-2_V1	-	BAG6X1-2
Lactococcus lactis subsp. lactis JCM 7638	1291762	PRJDB771	243683	Terrabacteria group	Firmicutes	2.39386	34.9	-	BBAP01	24	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000471	GCA_001311315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/311/315/GCA_001311315.1_ASM131131v1	-	JCM 7638
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.75125	68.7	-	BDOA01	367	5540	5145	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076686	GCA_002089735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/735/GCA_002089735.1_ASM208973v1	28045086	NN-122
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.83576	38	-	FFJI01	15	1846	1713	2/9/16	3/27/17	Scaffold	SC	SAMEA2674769	GCA_900027015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/015/GCA_900027015.1_14412_4_51	-	2842STDY5882079
Mycobacterium tuberculosis R1207	747369	PRJNA46669	46669	Terrabacteria group	Actinobacteria	4.39727	65.2994	chromosome:NZ_CM001045.1/CM001045.1	ADNH01	1	4326	4087	11/30/10	5/18/17	Chromosome	Texas A&M University	SAMN02471041	GCA_000184045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/184/045/GCA_000184045.1_ASM18404v1	21110864	R1207
Staphylococcus aureus	1280	PRJEB9500	312334	Terrabacteria group	Firmicutes	2.77808	32.8	chromosome 1:NZ_LN854556.1/LN854556.1	-	1	2856	2677	2/17/16	3/5/17	Complete Genome	WTSI	SAMEA3432862	GCA_900004855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/004/855/GCA_900004855.1_BB155	-	BB155
Streptococcus pneumoniae GA17545	886289	PRJNA52475	52475	Terrabacteria group	Firmicutes	2.10346	39.8	-	AFGA01	11	2277	1981	5/3/11	3/8/17	Contig	Institute for Genome Sciences	SAMN00792759	GCA_000211875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/211/875/GCA_000211875.2_ASM21187v2	-	GA17545
Helicobacter pylori	210	PRJDB4296	362565	Proteobacteria	delta/epsilon subdivisions	1.60278	38.8	chromosome:AP017357.1	-	1	1577	1543	1/18/17	1/18/17	Chromosome	"Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture"	SAMD00042485	GCA_002357795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/795/GCA_002357795.1_ASM235779v1	-	MKF3
Neisseria meningitidis H44/76	909420	PRJNA56071	56071	Proteobacteria	Betaproteobacteria	2.17038	51.6	-	AEQZ01	46	2526	2168	1/5/11	3/21/17	Contig	Academic Medical Center Amsterdam	SAMN02471538	GCA_000185025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/025/GCA_000185025.2_ASM18502v2	21378179	H44/76
Streptococcus pyogenes ABC020039391	1439115	PRJNA233158	233158	Terrabacteria group	Firmicutes	1.79647	38.5	-	JJGW01	6	1815	1705	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567507	GCA_000630585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/585/GCA_000630585.1_Stre_pyog_ABC020039391_V1	-	ABC020039391
Leptospira interrogans serovar Copenhageni str. Fiocruz LV4188	1291344	PRJNA189012	189012	Spirochaetes	Spirochaetia	4.61411	35	-	AOVE01	167	4121	3756	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920124	GCA_000343795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/795/GCA_000343795.1_CA_glsol150	-	Fiocruz LV4188
Bacillus anthracis	1392	PRJNA336484	336484	Terrabacteria group	Firmicutes	5.37699	35.2	-	MVKE01	87	5997	5666	3/13/17	3/15/17	Contig	National Center for Disease Control and Public Health (NCDC) of Georgia	SAMN05511400	GCA_002025335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/335/GCA_002025335.1_ASM202533v1	-	Ba-7673/89-Geo
Shigella flexneri Shi06HN250	1434139	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.48565	50.5	-	AZOR01	306	4975	4275	1/29/14	2/23/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437374	GCA_000565725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/725/GCA_000565725.1_ASM56572v1	-	Shi06HN250
Pseudomonas aeruginosa	287	PRJNA277811	277811	Proteobacteria	Gammaproteobacteria	7.25915	65.818	chromosome:NZ_CP011369.1/CP011369.1; plasmid unnamed:NZ_CP011370.1/CP011370.1	-	2	7109	6885	5/6/15	4/10/17	Chromosome	Maasstad Hospital	SAMN03396926	GCA_000988505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/505/GCA_000988505.1_ASM98850v1	-	S04 90
Acinetobacter baumannii R1B	1455316	PRJNA237446	237446	Proteobacteria	Gammaproteobacteria	4.25481	38.9	-	JICK01	23	4124	3954	4/8/14	3/16/17	Scaffold	Broad Institute	SAMN02628532	GCA_000623035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/035/GCA_000623035.1_Acin_baum_R1B_V1	-	R1B
Streptococcus agalactiae CCUG 49087	1154818	PRJNA86265	86265	Terrabacteria group	Firmicutes	2.0172	35.3	-	ALQV01	36	2070	1937	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991096	GCA_000288895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/895/GCA_000288895.1_ASM28889v1	-	CCUG 49087
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.02799	41.2	-	CEHC01	69	2003	1923	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234082	GCA_000936305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/305/GCA_000936305.1_Velvet_assembly	-	S93M
Pseudomonas syringae pv. actinidifoliorum	1674924	PRJNA287873	287873	Proteobacteria	Gammaproteobacteria	6.05868	58.8	-	LJFM01	176	5675	5274	1/5/16	3/27/17	Contig	INRA	SAMN03788033	GCA_001497495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/495/GCA_001497495.1_ASM149749v1	-	CFBP8043
Legionella pneumophila	446	PRJNA281285	281285	Proteobacteria	Gammaproteobacteria	3.68492	38.2	-	LBAR01	52	3398	3234	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03486936	GCA_001582715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/715/GCA_001582715.1_ASM158271v1	26888563	NX0702
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.05807	50.6	-	NQDS01	102	5237	4892	8/11/17	8/15/17	Contig	JCVI	SAMN07450653	GCA_002248325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/325/GCA_002248325.1_ASM224832v1	-	ECPUTH08
Bacteroides fragilis JCM 11017	1235816	PRJDB564	243143	FCB group	Bacteroidetes/Chlorobi group	5.27083	43.4	-	BAIY01	98	-	-	4/1/14	9/15/15	Contig	The University of Tokyo	SAMD00008955	GCA_000613425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/425/GCA_000613425.1_ASM61342v1	-	JCM 11017
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.85748	67.2	-	MUTR01	61	7337	7046	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001918	GCA_001992495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/495/GCA_001992495.1_ASM199249v1	-	VC13600
Burkholderia pseudomallei	28450	PRJNA244253	244253	Proteobacteria	Betaproteobacteria	7.55753	67.9	-	JOTX01	3	7964	7145	9/23/14	4/10/17	Scaffold	Los Alamos National Laboratory	SAMN02864880	GCA_000757225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/225/GCA_000757225.1_BEC	25414490	BEC
Chlamydia trachomatis E/CS88(f)	1266739	PRJNA183016	183016	PVC group	Chlamydiae	1.03175	41.2	-	ANON01	3	957	897	9/30/13	3/24/17	Contig	"National Institute of Health, Portugal"	SAMN02470648	GCA_000472205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/205/GCA_000472205.1_E_CS88_f_	23542454	E/CS88(f)
Bacillus thuringiensis serovar darmstadiensis	132264	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.69425	35.1	-	NFEA01	50	5991	5642	5/17/17	5/24/17	Contig	Huazhong Agricultural University	SAMN05934551	GCA_002147295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/295/GCA_002147295.1_ASM214729v1	-	BGSC 4M3
Vibrio cholerae HC-80A1	991988	PRJNA63983	63983	Proteobacteria	Gammaproteobacteria	4.03238	47.5	-	AGVB02	115	3823	3677	12/10/12	3/24/17	Scaffold	Institute for Genome Sciences	SAMN00262234	GCA_000327245.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/245/GCA_000327245.3_ASM32724v3	-	HC-80A1
Clostridioides difficile CD200	1151300	PRJNA85775	85775	Terrabacteria group	Firmicutes	4.29688	28.2	-	AVIF01	218	4018	3835	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766602	GCA_000449645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/645/GCA_000449645.2_ASM44964v2	-	CD200
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.84152	32.3	-	MRJW01	103	1960	1554	4/19/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773906	GCA_002100625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/625/GCA_002100625.1_ASM210062v1	28348839	FDC434
Brucella abortus NI274	1160164	PRJNA173557	173557	Proteobacteria	Alphaproteobacteria	3.28548	57.2	-	AQML01	7	3375	3152	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811187	GCA_000365805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/805/GCA_000365805.1_Bruc_abor_NI274_V1	-	NI274
Xanthomonas oryzae pv. oryzae	64187	PRJNA269467	269467	Proteobacteria	Gammaproteobacteria	4.28014	63.9	-	JXGL01	445	4310	3420	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252570	GCA_001928835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/835/GCA_001928835.1_ASM192883v1	-	IXO597
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.04359	37.8	-	MLME01	650	2175	1774	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297044	GCA_001868445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/445/GCA_001868445.1_ASM186844v1	27118061	AWRIB329
Vibrio parahaemolyticus S165	1394698	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.02564	45.3	-	AWHO01	608	4846	4608	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02339012	GCA_000489175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/175/GCA_000489175.1_S165	-	S165
Bacillus subtilis	1423	PRJNA321942	321942	Terrabacteria group	Firmicutes	4.13022	43.5	-	LYUI01	22	4299	4119	6/15/16	3/28/17	Contig	Microbial Institue for Fermentation Industry	SAMN05162512	GCA_001662955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/955/GCA_001662955.1_ASM166295v1	-	SRCM101280
Staphylococcus aureus	1280	PRJNA301649	301649	Terrabacteria group	Firmicutes	2.80359	32.8	chromosome:NZ_CP013137.1/CP013137.1	-	1	2932	2671	11/17/15	3/5/17	Complete Genome	Third Military Medical University	SAMN04253017	GCA_001444345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/345/GCA_001444345.1_ASM144434v1	-	XQ
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.77753	28	-	LFOO01	65	3609	3484	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779947	GCA_001573315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/315/GCA_001573315.1_ASM157331v1	26939550	ATCC 449
Enterococcus faecalis EnGen0067	1151209	PRJNA85669	85669	Terrabacteria group	Firmicutes	3.33615	37.1	-	AIJH01	39	3544	3358	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00792315	GCA_000390945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/945/GCA_000390945.1_Ente_faec_B1290_V1	-	B1290
Streptococcus mutans SA38	857104	PRJNA49855	49855	Terrabacteria group	Firmicutes	1.99289	36.7	-	AHRD01	91	1892	1807	2/11/13	3/23/17	Contig	Cornell University	SAMN02428983	GCA_000339615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/615/GCA_000339615.1_ASM33961v1	23228887	SA38
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14645	52.4	-	CQHX01	79	2516	2199	3/23/15	4/11/17	Contig	SC	SAMEA1690506	GCA_001114185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/185/GCA_001114185.1_8289_2_52	-	GCGS052
Enterococcus faecium EnGen0007	1138900	PRJNA82451	82451	Terrabacteria group	Firmicutes	2.69405	38.2	-	AHXB01	3	2728	2527	12/17/12	4/10/17	Scaffold	Broad Institute	SAMN00779813	GCA_000321845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/845/GCA_000321845.1_Ente_faec_E1578_V1	-	E1578
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.80274	66.5	-	JVGS01	47	4499	4335	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197640	GCA_001071115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/115/GCA_001071115.1_ASM107111v1	26230489	447_SMAL
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15991	41.1	-	CWFK01	75	2100	1929	6/24/15	3/26/17	Contig	SC	SAMEA1032884	GCA_001177105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/105/GCA_001177105.1_6817_1_61	-	EQUI0014
Pasteurella multocida subsp. septica	115545	PRJNA355236	355236	Proteobacteria	Gammaproteobacteria	2.27156	40.2	-	MTIF01	19	2166	2075	3/8/17	3/11/17	Scaffold	INRA	SAMN06140946	GCA_002024005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/005/GCA_002024005.1_ASM202400v1	-	CIRMBP-0835
Lactobacillus rhamnosus	47715	PRJNA348789	348789	Terrabacteria group	Firmicutes	2.88747	46.7	-	MLKA01	31	2882	2673	10/21/16	4/5/17	Scaffold	The University of Queensland	SAMN05915696	GCA_001831275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/275/GCA_001831275.1_ASM183127v1	-	ASCC 1521
Brucella melitensis 02-7258	1388745	PRJNA217071	217071	Proteobacteria	Alphaproteobacteria	3.29928	57.2	-	AXMQ01	14	3379	3152	10/24/13	4/2/17	Contig	Broad Institute	SAMN02334525	GCA_000479975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/975/GCA_000479975.1_Bruc_meli_02-7258_V1	-	Feb-58
Staphylococcus aureus subsp. aureus	46170	PRJDB3193	279569	Terrabacteria group	Firmicutes	2.77016	32.8	chromosome Unknown:NZ_AP014652.1/AP014652.1	-	1	2871	2692	3/24/15	3/5/17	Complete Genome	Tokai University	SAMD00020283	GCA_001549655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/655/GCA_001549655.1_ASM154965v1	25779584	TMUS2126
Corynebacterium diphtheriae bv. mitis	1806053	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.38592	53.5	-	LSXA01	47	2318	2118	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497022	GCA_002202825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/825/GCA_002202825.1_S86	-	5171
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.46031	46.9	-	CWIW01	131	4229	3961	7/6/15	3/26/17	Scaffold	SC	SAMEA980170	GCA_001182125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/125/GCA_001182125.1_5116_3_9	-	H469/87
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.19847	59.5	-	JVIS01	64	4913	4772	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197588	GCA_001064855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/855/GCA_001064855.1_ASM106485v1	26230489	398_SMAR
Lactobacillus plantarum	1590	PRJNA313771	313771	Terrabacteria group	Firmicutes	3.24303	44.5	-	LUWD01	96	3133	2996	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04525416	GCA_001639485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/485/GCA_001639485.1_ASM163948v1	-	Nizo2029
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69152	31.3	-	CUTQ01	19	1741	1641	3/31/15	3/18/17	Contig	SC	SAMEA1401627	GCA_001232685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/685/GCA_001232685.1_7213_3_33	-	OXC6576
Burkholderia sp. A2	236253	PRJNA324744	324744	Proteobacteria	Betaproteobacteria	7.51	66.9	-	LZXX01	170	6973	6513	9/16/16	4/17/17	Scaffold	"Australian Centre for Ecogenomics, The University of Queensland"	SAMN05213932	GCA_001729305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/305/GCA_001729305.1_ASM172930v1	-	A2
Cutibacterium acnes	1747	PRJNA323688	323688	Terrabacteria group	Actinobacteria	2.52296	60.1	-	LZCO01	39	2570	2410	6/10/16	4/5/17	Scaffold	Aarhus University	SAMN05185387	GCA_001661025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/661/025/GCA_001661025.1_ASM166102v1	-	44.1.L1
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.47153	32.7	-	CUCJ01	77	2448	2332	3/31/15	4/21/17	Scaffold	SC	SAMEA1035026	GCA_001226105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/105/GCA_001226105.1_7067_4_26	-	25-29
Enterobacter cloacae	550	PRJNA355403	355403	Proteobacteria	Gammaproteobacteria	5.13813	55.7	-	MTSO01	92	4976	4722	2/5/17	3/29/17	Contig	"West China Hospital, Sichuan University"	SAMN06249239	GCA_001984825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/825/GCA_001984825.1_ASM198482v1	-	WCHECl-C4
Cronobacter sakazakii	28141	PRJNA247758	247758	Proteobacteria	Gammaproteobacteria	4.40221	56.9	-	JNBF01	245	4249	3463	1/25/17	4/6/17	Scaffold	"Nottingham Trent University, UK"	SAMN02780889	GCA_001971105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/105/GCA_001971105.1_ASM197110v1	-	5
Mycobacterium abscessus	36809	PRJNA315990	315990	Terrabacteria group	Actinobacteria	4.80263	64.2	-	NEGQ01	36	4825	4656	5/16/17	5/24/17	Contig	University of Michigan Medical School	SAMN06806047	GCA_002142755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/755/GCA_002142755.1_ASM214275v1	-	FLAC052
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.08034	62.6	-	DELF01	77	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06454561	GCA_002354255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/255/GCA_002354255.1_ASM235425v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.40234	67.3	-	LPCF01	111	6720	6358	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449394	GCA_001528385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/385/GCA_001528385.1_ASM152838v1	-	MSMB2018WGS
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.99689	38.7	-	NGEN01	144	3895	3675	5/15/17	5/23/17	Contig	JCVI	SAMN06837768	GCA_002137935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/935/GCA_002137935.1_ASM213793v1	-	PR316
Enterobacter hormaechei subsp. oharae	301102	PRJNA271006	271006	Proteobacteria	Gammaproteobacteria	4.86017	55.3	-	JZLE01	91	4857	4621	3/30/15	3/25/17	Contig	JCVI	SAMN03277207	GCA_000966165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/165/GCA_000966165.1_ASM96616v1	-	CIDEIMsCOL20
Klebsiella aerogenes	548	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.22439	55.1	-	JWFZ01	194	5126	4906	7/10/15	4/6/17	Scaffold	University of Washington	SAMN03196983	GCA_001052095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/095/GCA_001052095.1_ASM105209v1	26230489	1020_EAER
Pseudomonas sp. GM17	1144323	PRJNA83069	83069	Proteobacteria	Gammaproteobacteria	6.78696	62.8	-	AKJU01	280	6164	5911	7/27/12	5/19/17	Contig	Oak Ridge National Lab	SAMN00839631	GCA_000282175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/175/GCA_000282175.1_Pseudomonas.strGM17_v1.0	23045501	GM17
Streptomyces sp. Root63	1736573	PRJNA297942	297942	Terrabacteria group	Actinobacteria	9.2138	71.5	-	LMGX01	24	8188	7806	11/2/15	3/12/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155842	GCA_001427565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/565/GCA_001427565.1_Root63	26633631	Root63
Bacillus sp. CHD6a	1643452	PRJNA281430	281430	Terrabacteria group	Firmicutes	3.96577	39.9	-	LBMD01	56	3969	3846	9/18/15	4/11/17	Contig	Xiamen University	SAMN03488035	GCA_001293645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/645/GCA_001293645.1_ASM129364v1	-	CHD6a
Acinetobacter sp. 25977_1	1310905	PRJNA194982	194982	Proteobacteria	Gammaproteobacteria	4.03809	38.7	-	JFVP01	84	4065	3700	3/11/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02570336	GCA_000589135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/135/GCA_000589135.1_ASM58913v1	-	25977_1
Clostridium sp. CAG:780	1262839	PRJEB1004	206819	Terrabacteria group	Firmicutes	1.26426	30	-	CAZO01	77	1218	1194	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138597	GCA_000434195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/195/GCA_000434195.1_MGS780	-	-
Sphingomonas sp. JGI 0001002-A17	1094939	PRJNA176078	176078	Proteobacteria	Alphaproteobacteria	0.56336	62.8	-	AUOQ02	35	-	-	7/16/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440701	GCA_000464295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/295/GCA_000464295.2_ASM46429v2	-	JGI 0001002-A17
Rhodococcus sp. 05-2254-2	2022516	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.88797	64.6	-	NOZJ01	25	5575	5431	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376386	GCA_002259095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/095/GCA_002259095.1_ASM225909v1	-	05-2254-2
Enterobacter cloacae complex sp. GN04787	1820019	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.9363	55.7	-	LVTS01	46	4782	4590	4/25/16	4/12/17	Contig	JCVI	SAMN04578340	GCA_001631115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/115/GCA_001631115.1_ASM163111v1	-	GN04787
Staphylococcus sp. HMSC061G04	1715208	PRJNA296337	296337	Terrabacteria group	Firmicutes	2.36741	32.7	-	LTQI01	95	2334	2238	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498662	GCA_001836785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/785/GCA_001836785.1_ASM183678v1	-	HMSC061G04
Corynebacterium sp. Marseille-P2417	1816684	PRJEB19973	379097	Terrabacteria group	Actinobacteria	3.03021	63.7	-	FWCI01	13	2771	2613	3/18/17	4/3/17	Scaffold	URMITE	SAMEA103910525	GCA_900169525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/525/GCA_900169525.1_PRJEB19973	-	Marseille-P2417
Streptococcus sp. GMD5S	1169674	PRJNA157419	157419	Terrabacteria group	Firmicutes	2.02705	41.1	-	AJRG02	77	2003	1897	9/19/12	4/8/17	Contig	Los Alamos National Laboratory	SAMN02470267	GCA_000298715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/715/GCA_000298715.2_ASM29871v2	23493677	GMD5S
Mycobacterium sp. 852002-51613_SCH5001154	1834104	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.39725	67.7	-	LZII01	86	5075	4902	6/17/16	4/13/17	Contig	JCVI	SAMN04691946	GCA_001667425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/425/GCA_001667425.1_ASM166742v1	-	852002-51613_SCH5001154
Paenibacillus sp. VTT E-133280	1986222	PRJNA385758	385758	Terrabacteria group	Firmicutes	6.94571	43.6	-	NFUX01	199	6112	5934	8/22/17	8/24/17	Scaffold	VTT Technical Research Centre of Finland	SAMN06909662	GCA_002264385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/385/GCA_002264385.1_ASM226438v1	-	VTT E-133280
Prochlorococcus sp. scB243_495K23	1471472	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.62014	31.3	-	JFLW01	124	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671343	GCA_000635495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/495/GCA_000635495.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Rhizobium sp. JGI 0001005-K05	1157686	PRJNA169805	169805	Proteobacteria	Alphaproteobacteria	2.07467	59.8	-	AQWY01	391	-	-	4/20/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441049	GCA_000376185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/185/GCA_000376185.1_ASM37618v1	-	JGI 0001005-K05
Staphylococcus argenteus	985002	PRJEB20633	390605	Terrabacteria group	Firmicutes	2.98162	32.2	-	FXVU01	153	-	-	6/15/17	6/15/17	Scaffold	Geogentics	SAMEA104034167	GCA_900183745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/183/745/GCA_900183745.1_H1864	-	-
Rhizobium sp. JGI 0001002-C21	1094947	PRJNA176069	176069	Proteobacteria	Alphaproteobacteria	0.439553	60.5	-	ATTX02	32	-	-	7/9/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440914	GCA_000419905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/905/GCA_000419905.2_ASM41990v2	-	JGI 0001002-C21
Prochlorococcus sp. scB243_495N3	1471475	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.901033	31.3	-	JFLZ01	368	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671346	GCA_000635515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/515/GCA_000635515.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Paenibacillus sp. VTT E-133291	1986223	PRJNA385758	385758	Terrabacteria group	Firmicutes	7.0778	43.5	-	NFVA01	286	6339	6148	8/22/17	8/24/17	Scaffold	VTT Technical Research Centre of Finland	SAMN06909698	GCA_002264395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/395/GCA_002264395.1_ASM226439v1	-	VTT E-133291
Mycobacterium sp. 852002-51759_SCH5129042	1856866	PRJNA305922	305922	Terrabacteria group	Actinobacteria	7.8708	67.8	-	LZIG01	377	7169	6848	6/17/16	4/13/17	Contig	JCVI	SAMN05202175	GCA_001667455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/455/GCA_001667455.1_ASM166745v1	-	852002-51759_SCH5129042
Streptococcus sp. OBRC6	936587	PRJNA165931	165931	Terrabacteria group	Firmicutes	2.14126	38.4	-	JACR01	54	2109	1959	1/13/14	4/17/17	Contig	JCVI	SAMN02597448	GCA_000517685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/685/GCA_000517685.1_SspOBRC6v1.0	-	OBRC6
Corynebacterium sp. EPI-003-04-2554_SCH2473622	1834153	PRJNA305922	305922	Terrabacteria group	Actinobacteria	2.36696	55.3	-	LZMN01	85	2161	1957	6/17/16	4/12/17	Contig	JCVI	SAMN04696134	GCA_001665955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/955/GCA_001665955.1_ASM166595v1	-	EPI-003-04-2554_SCH2473622
Staphylococcus sp. HMSC062A01	1715194	PRJNA296322	296322	Terrabacteria group	Firmicutes	2.35084	32.6	-	LTQG01	50	2318	2185	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498656	GCA_001836805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/805/GCA_001836805.1_ASM183680v1	-	HMSC062A01
Enterobacter cloacae complex sp. GN05526	1820021	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.10054	55.7	-	LVUF01	122	5017	4689	4/25/16	4/12/17	Contig	JCVI	SAMN04578342	GCA_001631445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/445/GCA_001631445.1_ASM163144v1	-	GN05526
Rhodococcus sp. 02-925g	2022503	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.74793	64.7	-	NOZM01	38	5394	5245	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07376373	GCA_002259105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/105/GCA_002259105.1_ASM225910v1	-	02-925g
Sphingomonas sp. JGI 0001003-C6	1094946	PRJNA176450	176450	Proteobacteria	Alphaproteobacteria	0.155074	57.4	-	AUOV01	38	-	-	7/16/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440703	GCA_000464395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/395/GCA_000464395.1_ASM46439v1	-	JGI 0001003-C6
Clostridium sp. CAG:492	1262813	PRJEB905	206928	Terrabacteria group	Firmicutes	1.21082	27.2	-	CBBO01	135	1117	1098	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138604	GCA_000434335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/335/GCA_000434335.1_MGS492	-	-
Acinetobacter sp. 25977_2	1310906	PRJNA194983	194983	Proteobacteria	Gammaproteobacteria	4.04558	38.7	-	JFVO01	88	4077	3719	3/11/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02570337	GCA_000589155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/155/GCA_000589155.1_ASM58915v1	-	25977_2
Bacillus sp. JCM 19041	1460637	PRJDB1615	243815	Terrabacteria group	Firmicutes	4.79899	40.2	-	BAXC01	287	5294	3700	10/1/15	4/11/17	Contig	"Microbe Division/JCM, RIKEN BioResource Center"	SAMD00000377	GCA_001310375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/375/GCA_001310375.1_ASM131037v1	-	JCM 19041
Streptomyces sp. Root66D1	1736582	PRJNA297942	297942	Terrabacteria group	Actinobacteria	7.58641	72.4	-	LMHG01	32	6833	6531	11/2/15	3/13/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155851	GCA_001427745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/427/745/GCA_001427745.1_Root66D1	26633631	Root66D1
Pseudomonas sp. GM18	1144324	PRJNA83071	83071	Proteobacteria	Gammaproteobacteria	6.29762	59.5	-	AKJT01	140	5804	5600	7/27/12	5/24/17	Contig	Oak Ridge National Lab	SAMN00839632	GCA_000282195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/195/GCA_000282195.1_Pseudomonas.strGM18_v1.0	23045501	GM18
Klebsiella aerogenes	548	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.16409	55.1	-	JVVV01	94	5023	4812	7/10/15	4/6/17	Scaffold	University of Washington	SAMN03197247	GCA_001052565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/565/GCA_001052565.1_ASM105256v1	26230489	1277_EAER
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA271006	271006	Proteobacteria	Gammaproteobacteria	5.14136	55.2	-	JZKZ01	144	5085	4819	4/3/15	3/26/17	Contig	JCVI	SAMN03277202	GCA_000968675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/675/GCA_000968675.1_ASM96867v1	-	CIDEIMsCOL15
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.97402	38.6	-	NGET01	58	3798	3642	5/15/17	5/23/17	Contig	JCVI	SAMN06837827	GCA_002138095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/095/GCA_002138095.1_ASM213809v1	-	PR386
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.41569	67.2	-	LPCG01	186	6693	6252	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449395	GCA_001528405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/405/GCA_001528405.1_ASM152840v1	-	MSMB2020WGS
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.82482	64.7	-	DELJ01	114	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451364	GCA_002354345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/345/GCA_002354345.1_ASM235434v1	28894102	-
Mycobacterium abscessus	36809	PRJNA315990	315990	Terrabacteria group	Actinobacteria	4.8742	64.2	-	NEGO01	19	4849	4721	5/16/17	5/24/17	Contig	University of Michigan Medical School	SAMN06806049	GCA_002142765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/765/GCA_002142765.1_ASM214276v1	-	FLAC078
Cronobacter sakazakii	28141	PRJNA247759	247759	Proteobacteria	Gammaproteobacteria	4.50028	56.5	-	JNBG01	202	4365	4168	1/25/17	4/6/17	Scaffold	"Nottingham Trent University, UK"	SAMN02780890	GCA_001971115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/115/GCA_001971115.1_ASM197111v1	-	6
Enterobacter cloacae	550	PRJNA376029	376029	Proteobacteria	Gammaproteobacteria	5.22886	54.3	-	MWLI01	439	5102	4814	3/3/17	5/17/17	Contig	University of Sao Paulo	SAMN06349434	GCA_002018415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/415/GCA_002018415.1_ASM201841v1	-	ICBECLAM6
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.52269	32.7	-	CUCV01	101	2533	2397	3/31/15	4/21/17	Scaffold	SC	SAMEA1035112	GCA_001226705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/705/GCA_001226705.1_7067_4_38	-	51-07
Cutibacterium acnes	1747	PRJNA327858	327858	Terrabacteria group	Actinobacteria	2.47959	60.1	-	MAUY01	19	2499	2362	10/3/16	4/5/17	Scaffold	Nantes University Hospital	SAMN05360248	GCA_001750555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/555/GCA_001750555.1_ASM175055v1	-	NTS_31306190
Burkholderia sp. A27	1755991	PRJNA376621	376621	Proteobacteria	Betaproteobacteria	7.39309	63.5	-	MWJQ01	28	6647	6352	4/12/17	4/17/17	Scaffold	AgResearch	SAMN06445002	GCA_002087245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/245/GCA_002087245.1_ASM208724v1	-	A27
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.73108	31.3	-	CUOB01	27	1815	1709	3/31/15	3/18/17	Contig	SC	SAMEA1010417	GCA_001233705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/705/GCA_001233705.1_7065_7_77	-	OXC6425
Lactobacillus plantarum	1590	PRJNA313911	313911	Terrabacteria group	Firmicutes	3.15666	44.4	-	LUWF01	145	3160	2878	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04525445	GCA_001639505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/505/GCA_001639505.1_ASM163950v1	-	Nizo2257
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.20961	59.5	-	JVGM01	33	4949	4788	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197646	GCA_001064975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/975/GCA_001064975.1_ASM106497v1	26230489	454_SMAR
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.41539	47	-	CWIU01	104	4118	3866	7/6/15	3/26/17	Scaffold	SC	SAMEA980189	GCA_001182145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/145/GCA_001182145.1_4976_7_5	-	Y127
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.40418	53.6	-	LSXB01	47	2330	2109	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497019	GCA_002202835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/835/GCA_002202835.1_S87	-	5138
Staphylococcus aureus subsp. aureus	46170	PRJDB3193	279569	Terrabacteria group	Firmicutes	2.77016	32.8	chromosome Unknown:NZ_AP014653.1/AP014653.1	-	1	2871	2692	3/24/15	3/5/17	Complete Genome	Tokai University	SAMD00020284	GCA_001549675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/675/GCA_001549675.1_ASM154967v1	25779584	TMUS2134
Brucella melitensis 11-1823-3434	1388740	PRJNA217059	217059	Proteobacteria	Alphaproteobacteria	3.29825	57.2	-	AXNC01	13	3375	3145	10/24/13	4/2/17	Contig	Broad Institute	SAMN02334513	GCA_000480215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/215/GCA_000480215.1_Bruc_meli_11-1823-3434_V1	-	11-1823-3434
Lactobacillus rhamnosus	47715	PRJNA343164	343164	Terrabacteria group	Firmicutes	2.91585	46.6	-	MJHB01	72	2990	2790	2/1/17	4/6/17	Scaffold	ETH Zurich	SAMN05717709	GCA_001981725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/725/GCA_001981725.1_ASM198172v1	-	RI-004
Pasteurella multocida subsp. septica	115545	PRJNA355236	355236	Proteobacteria	Gammaproteobacteria	2.21459	40.3	-	MTIH01	13	2084	1995	3/8/17	3/11/17	Scaffold	INRA	SAMN06140947	GCA_002024015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/015/GCA_002024015.1_ASM202401v1	-	CIRMBP-0872
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.09338	41.2	-	CWCL01	76	2006	1837	6/24/15	3/26/17	Contig	SC	SAMEA1032885	GCA_001177125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/125/GCA_001177125.1_6903_6_10	-	EQUI0155
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.95648	65.8	-	JVFG01	226	4646	4493	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197678	GCA_001071175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/175/GCA_001071175.1_ASM107117v1	26230489	485_SMAL
Enterococcus faecium EnGen0003	1138901	PRJNA82453	82453	Terrabacteria group	Firmicutes	3.02165	38.1	-	AHXC01	14	3063	2848	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779814	GCA_000321865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/865/GCA_000321865.1_Ente_faec_E1590_V1	-	E1590
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14975	52.4	-	CQMK01	68	2528	2195	3/23/15	4/11/17	Contig	SC	SAMEA1690450	GCA_001114265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/265/GCA_001114265.1_8289_2_71	-	GCGS071
Streptococcus mutans OMZ175	857099	PRJNA49867	49867	Terrabacteria group	Firmicutes	2.00323	36.8	-	AHRI01	130	1980	1865	2/11/13	3/23/17	Contig	Cornell University	SAMN02429035	GCA_000339635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/635/GCA_000339635.1_ASM33963v1	23228887	OMZ175
Enterococcus faecalis EnGen0068	1151210	PRJNA85671	85671	Terrabacteria group	Firmicutes	3.26917	37.2	-	AIJI01	12	3439	3271	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00792316	GCA_000390965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/965/GCA_000390965.1_Ente_faec_B1327_V1	-	B1327
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	4.00213	28	-	LFOP01	99	3851	3666	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779957	GCA_001573325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/325/GCA_001573325.1_ASM157332v1	26939550	Hall 183
Staphylococcus aureus subsp. aureus ST772-MRSA-V	1343064	PRJNA270689	270689	Terrabacteria group	Firmicutes	2.86051	32.8	chromosome:NZ_CP010526.1/CP010526.1	-	1	2971	2806	1/20/15	3/4/17	Complete Genome	Menzies School of Health Research	SAMN03268345	GCA_000828035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/035/GCA_000828035.1_ASM82803v1	-	DAR4145
Bacillus subtilis	1423	PRJNA323402	323402	Terrabacteria group	Firmicutes	4.18463	43.9	-	LZCF01	112	4311	4082	6/16/16	3/28/17	Contig	CSIR- National Environmental Engineering Research Institute	SAMN05178557	GCA_001663575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/575/GCA_001663575.1_ASM166357v1	-	ND23
Vibrio parahaemolyticus S164	1394697	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	4.98594	45.3	-	AWHP01	541	4772	4541	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02339011	GCA_000489195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/195/GCA_000489195.1_S164	-	S164
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.93823	37.8	-	MLMN01	307	2007	1739	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297053	GCA_001868485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/485/GCA_001868485.1_ASM186848v1	27118061	AWRIB338
Xanthomonas oryzae pv. oryzae	64187	PRJNA269469	269469	Proteobacteria	Gammaproteobacteria	4.27904	63.9	-	JXGN01	444	4288	3444	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252579	GCA_001928845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/845/GCA_001928845.1_ASM192884v1	-	IXO603
Brucella abortus NI492	1160169	PRJNA173563	173563	Proteobacteria	Alphaproteobacteria	3.28104	57.2	-	AQMO01	4	3372	3152	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811193	GCA_000365825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/365/825/GCA_000365825.1_Bruc_abor_NI492_V1	-	NI492
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.84683	32.3	-	MRJN01	97	2010	1557	4/19/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03774138	GCA_002100665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/665/GCA_002100665.1_ASM210066v1	28348839	FSC555
Clostridioides difficile CD201	1151301	PRJNA85777	85777	Terrabacteria group	Firmicutes	4.03045	28.3	-	AVIG01	55	3684	3519	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766603	GCA_000449665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/665/GCA_000449665.2_ASM44966v2	-	CD201
Vibrio cholerae O1 str. 116059	1095661	PRJNA76257	76257	Proteobacteria	Gammaproteobacteria	4.01706	47.4	-	APFJ01	92	3881	3685	3/22/13	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00989305	GCA_000348045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/045/GCA_000348045.2_ASM34804v2	-	116059
Bacillus thuringiensis serovar wuhanensis	52024	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.3367	35.2	-	NFEE01	199	6738	6181	5/17/17	6/15/17	Contig	Huazhong Agricultural University	SAMN05934556	GCA_002147375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/375/GCA_002147375.1_ASM214737v1	-	BGSC 4T1
Chlamydia trachomatis E/CS88(i)	1266902	PRJNA183012	183012	PVC group	Chlamydiae	1.03175	41.2	-	ANOM01	3	957	897	9/30/13	3/24/17	Contig	"National Institute of Health, Portugal"	SAMN02470647	GCA_000472225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/225/GCA_000472225.1_E_CS88_i_	23542454	E/CS88(i)
Burkholderia pseudomallei	28450	PRJNA244401	244401	Proteobacteria	Betaproteobacteria	7.46902	67.8	-	JOTY01	6	7818	7038	9/23/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02864887	GCA_000757235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/235/GCA_000757235.1_BEG	25414490	BEG
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.7942	67.2	-	MUTQ01	72	7288	6997	2/10/17	4/2/17	Contig	University of British Columbia	SAMN05001917	GCA_001992505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/505/GCA_001992505.1_ASM199250v1	-	VC13602
Bacteroides fragilis str. 3725 D9 ii	1339286	PRJNA206117	206117	FCB group	Bacteroidetes/Chlorobi group	7.28004	42.1	-	JNHH01	91	6388	6296	6/9/14	6/9/14	Contig	IGS	SAMN02370949	GCA_000699685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/685/GCA_000699685.1_ASM69968v1	-	3725 D9 ii
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.05905	50.7	-	NQDU01	173	5329	4934	8/11/17	8/15/17	Contig	JCVI	SAMN07450711	GCA_002248345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/345/GCA_002248345.1_ASM224834v1	-	ECPSTH02
Legionella pneumophila	446	PRJNA281287	281287	Proteobacteria	Gammaproteobacteria	3.43294	38.2	-	LBAS01	30	3115	2959	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03486938	GCA_001582775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/775/GCA_001582775.1_ASM158277v1	26888563	WX2011036
Pseudomonas syringae pv. syringae	321	PRJNA287460	287460	Proteobacteria	Gammaproteobacteria	6.18116	59.1	-	LIHT01	96	5647	5251	1/25/16	3/27/17	Contig	University of Edinburgh	SAMN03992219	GCA_001535725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/725/GCA_001535725.1_ASM153572v1	27145446	2340
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.12639	41	-	CEJT01	186	2153	1997	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233974	GCA_000936325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/325/GCA_000936325.1_Velvet_assembly	-	S10D
Streptococcus agalactiae LMG 15085	1154819	PRJNA86275	86275	Terrabacteria group	Firmicutes	1.97727	35.2	-	ALQW01	37	2042	1903	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991085	GCA_000288915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/915/GCA_000288915.1_ASM28891v1	-	LMG 15085
Acinetobacter baumannii BIDMC 56	1439316	PRJNA234144	234144	Proteobacteria	Gammaproteobacteria	3.94448	39	-	JMUH01	10	3770	3602	5/19/14	3/16/17	Scaffold	Broad Institute	SAMN02581277	GCA_000692095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/095/GCA_000692095.1_Acin_baum_BIDMC_56_V1	-	BIDMC 56
Pseudomonas aeruginosa	287	PRJNA320095	320095	Proteobacteria	Gammaproteobacteria	6.3683	66.4	chromosome:NZ_CP015647.1/CP015647.1	-	1	6059	5827	5/2/17	5/6/17	Chromosome	Universidad de los Andes	SAMN04916454	GCA_002116945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/116/945/GCA_002116945.1_ASM211694v1	-	M8A1
Shigella flexneri Shi06AH028	1434140	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.42305	50.5	-	AZOS01	301	4862	4213	1/29/14	2/22/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437375	GCA_000565745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/745/GCA_000565745.1_ASM56574v1	-	Shi06AH028
Bacillus anthracis	1392	PRJNA336484	336484	Terrabacteria group	Firmicutes	5.46042	35.1	-	MVKG01	71	6098	5738	3/13/17	3/15/17	Contig	National Center for Disease Control and Public Health (NCDC) of Georgia	SAMN05511398	GCA_002025345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/345/GCA_002025345.1_ASM202534v1	-	Ba-9065/08-Geo
Leptospira interrogans str. Fiocruz LV4225	1291366	PRJNA189011	189011	Spirochaetes	Spirochaetia	4.5964	35	-	AOVF01	147	4111	3754	3/1/13	5/18/17	Contig	J. Craig Venter Institute	SAMN01920620	GCA_000343815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/815/GCA_000343815.1_CA_glsol149	-	Fiocruz LV4225
Streptococcus pyogenes ABC020038558	1439109	PRJNA233156	233156	Terrabacteria group	Firmicutes	1.82595	38.6	-	JJGX01	3	1889	1733	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567505	GCA_000630605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/605/GCA_000630605.1_Stre_pyog_ABC020038558_V1	-	ABC020038558
Neisseria meningitidis N1568	562020	PRJNA31305	31305	Proteobacteria	Betaproteobacteria	2.18023	51.8	-	AEQD01	112	2611	2136	3/3/11	4/11/17	Contig	University of Maryland IGS	SAMN00000665	GCA_000191185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/185/GCA_000191185.2_ASM19118v2	21368196	N1568
Helicobacter pylori	210	PRJDB4296	362565	Proteobacteria	delta/epsilon subdivisions	1.59299	38.9	chromosome:AP017358.1	-	1	1567	1541	1/18/17	1/18/17	Chromosome	"Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture"	SAMD00042486	GCA_002357815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/815/GCA_002357815.1_ASM235781v1	-	MKF8
Streptococcus pneumoniae GA41301	760809	PRJNA48777	48777	Terrabacteria group	Firmicutes	2.157	39.6	-	AFGD01	17	2342	2038	5/3/11	3/9/17	Contig	Institute for Genome Sciences	SAMN00792778	GCA_000211915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/211/915/GCA_000211915.2_ASM21191v2	-	GA41301
Staphylococcus aureus	1280	PRJNA268517	268517	Terrabacteria group	Firmicutes	2.87277	32.8	chromosome:NZ_CP010295.1/CP010295.1	-	1	3016	2873	1/6/15	3/4/17	Complete Genome	Longhorn Vaccines & Diagnostics	SAMN03251897	GCA_000815045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/045/GCA_000815045.1_ASM81504v1	25767217	29b_MRSA
Mycobacterium tuberculosis S96-129	882098	PRJNA51869	51869	Terrabacteria group	Actinobacteria	4.343	65.2499	chromosome:NZ_CM001225.1/CM001225.1	AEGB01	1	4353	4063	6/28/11	5/18/17	Chromosome	"Uppsala University, dep. of Medical Biochemistry and Microbiology"	SAMN02472040	GCA_000220415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/415/GCA_000220415.1_ASM22041v1	21304944	S96-129
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.85838	38	-	FFIB01	14	1868	1736	2/9/16	3/27/17	Scaffold	SC	SAMEA2674709	GCA_900029195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/195/GCA_900029195.1_14412_4_6	-	2842STDY5882034
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.20864	69.1	-	BDOB01	242	4974	4724	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076677	GCA_002089755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/755/GCA_002089755.1_ASM208975v1	28045086	NN-127
Lactococcus lactis	1358	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.4735	34.8	-	DCNS01	118	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451709	GCA_002322075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/075/GCA_002322075.1_ASM232207v1	28894102	-
Bacillus cereus BAG5X2-1	1053191	PRJNA70347	70347	Terrabacteria group	Firmicutes	5.85529	35.4	-	AHDL01	9	6244	5812	8/15/12	6/15/17	Scaffold	Broad Institute	SAMN02596823	GCA_000291375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/375/GCA_000291375.1_Baci_cere_BAG5X2-1_G13204_V1	-	BAG5X2-1
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.4097	32	-	JVRT01	77	2367	2279	7/10/15	3/26/17	Contig	University of Washington	SAMN03197353	GCA_001071495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/495/GCA_001071495.1_ASM107149v1	26230489	161_SEPI
Staphylococcus aureus	1280	PRJNA268517	268517	Terrabacteria group	Firmicutes	2.87278	32.8	chromosome:NZ_CP010296.1/CP010296.1	-	1	3016	2873	1/6/15	3/4/17	Complete Genome	Longhorn Vaccines & Diagnostics	SAMN03251898	GCA_000815085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/085/GCA_000815085.1_ASM81508v1	25767217	31b_MRSA
Pseudomonas fluorescens	294	PRJNA339171	339171	Proteobacteria	Gammaproteobacteria	5.94039	60.2	-	MSDL01	87	5367	5162	3/7/17	3/11/17	Scaffold	USDA	SAMN05589720	GCA_002022375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/375/GCA_002022375.1_ASM202237v1	-	TDH5
Yersinia pestis PY-07	992133	PRJNA64293	64293	Proteobacteria	Gammaproteobacteria	4.76401	47.5	-	AKRS01	471	4618	4287	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141454	GCA_000268385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/385/GCA_000268385.1_ASM26838v1	-	PY-07
Staphylococcus aureus	1280	PRJNA268517	268517	Terrabacteria group	Firmicutes	2.87276	32.8	chromosome:NZ_CP010297.1/CP010297.1	-	1	3016	2873	1/6/15	3/4/17	Complete Genome	Longhorn Vaccines & Diagnostics	SAMN03251894	GCA_000815125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/125/GCA_000815125.1_ASM81512v1	25767217	33b
Staphylococcus aureus	1280	PRJNA268517	268517	Terrabacteria group	Firmicutes	2.87278	32.8	chromosome:NZ_CP010298.1/CP010298.1	-	1	3016	2872	1/6/15	3/4/17	Complete Genome	Longhorn Vaccines & Diagnostics	SAMN03251899	GCA_000815165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/165/GCA_000815165.1_ASM81516v1	25767217	26b_MRSA
Staphylococcus aureus	1280	PRJNA268517	268517	Terrabacteria group	Firmicutes	2.87278	32.8	chromosome:NZ_CP010299.1/CP010299.1	-	1	3016	2874	1/6/15	3/4/17	Complete Genome	Longhorn Vaccines & Diagnostics	SAMN03251895	GCA_000815205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/205/GCA_000815205.1_ASM81520v1	25767217	25b_MRSA
Staphylococcus aureus	1280	PRJNA268517	268517	Terrabacteria group	Firmicutes	2.87277	32.8	chromosome:NZ_CP010300.1/CP010300.1	-	1	3016	2873	1/6/15	3/4/17	Complete Genome	Longhorn Vaccines & Diagnostics	SAMN03251896	GCA_000815245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/245/GCA_000815245.1_ASM81524v1	25767217	27b_MRSA
Staphylococcus aureus subsp. aureus	46170	PRJNA259937	259937	Terrabacteria group	Firmicutes	2.88602	32.8	chromosome:NZ_CP009554.1/CP009554.1	-	1	3001	2795	11/5/14	3/4/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN03140315	GCA_000772025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/025/GCA_000772025.1_ASM77202v1	-	FORC_001
Staphylococcus aureus	1280	PRJNA239544	239544	Terrabacteria group	Firmicutes	3.05206	32.8	chromosome:CP007447.1	-	1	3064	2992	6/17/14	7/31/14	Complete Genome	Third Military Medical University	SAMN02693431	GCA_000709475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/475/GCA_000709475.1_ASM70947v1	-	XN108
Yersinia pestis PY-08	992134	PRJNA64295	64295	Proteobacteria	Gammaproteobacteria	4.7636	47.5	-	AKRT01	515	4666	4288	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141455	GCA_000268405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/405/GCA_000268405.1_ASM26840v1	-	PY-08
Pseudomonas fluorescens	294	PRJNA344671	344671	Proteobacteria	Gammaproteobacteria	6.16361	60	-	MKHA01	26	5667	5476	7/11/17	7/13/17	Scaffold	Purdue University	SAMN05830384	GCA_002216645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/645/GCA_002216645.1_ASM221664v1	-	TR3
Staphylococcus aureus	1280	PRJNA246435	246435	Terrabacteria group	Firmicutes	2.87292	32.8	chromosome:NZ_CP007690.1/CP007690.1	-	1	3022	2867	5/27/14	3/3/17	Complete Genome	University of Antwerpen	SAMN02777327	GCA_000695875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/875/GCA_000695875.1_ASM69587v1	24970829	UA-S391_USA300
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.39212	32	-	JVOY01	113	2315	2230	7/10/15	3/26/17	Contig	University of Washington	SAMN03197426	GCA_001071895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/895/GCA_001071895.1_ASM107189v1	26230489	237_SEPI
Bacillus cereus BAG5O-1	1053188	PRJNA70341	70341	Terrabacteria group	Firmicutes	5.88479	35.2	-	AHDI01	6	6196	5782	8/15/12	6/15/17	Scaffold	Broad Institute	SAMN02596820	GCA_000291395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/395/GCA_000291395.1_Baci_cere_BAG5O-1_G13200_V1	-	BAG5O-1
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.44206	68.8	-	BDOC01	336	5200	4821	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076692	GCA_002089775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/775/GCA_002089775.1_ASM208977v1	28045086	TR-M-1
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.87483	38	-	FFJL01	17	1894	1773	2/9/16	3/27/17	Scaffold	SC	SAMEA2674789	GCA_900029205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/205/GCA_900029205.1_14412_4_60	-	2842STDY5882088
Mycobacterium tuberculosis BTB05-552	882099	PRJNA51871	51871	Terrabacteria group	Actinobacteria	4.36478	65.3499	chromosome:NZ_CM001226.1/CM001226.1	AEGC01	1	4349	4084	6/28/11	5/18/17	Chromosome	"Uppsala University, dep. of Medical Biochemistry and Microbiology"	SAMN02472041	GCA_000220435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/435/GCA_000220435.1_ASM22043v1	21304944	BTB05-552
Staphylococcus aureus subsp. aureus	46170	PRJNA246435	246435	Terrabacteria group	Firmicutes	2.84632	32.8	chromosome:NZ_CP007659.1/CP007659.1	-	1	2951	2775	5/20/14	3/4/17	Complete Genome	University of Antwerpen	SAMN02767598	GCA_000695215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/215/GCA_000695215.1_ASM69521v1	24970829	H-EMRSA-15
Streptococcus pneumoniae GA47901	760861	PRJNA48915	48915	Terrabacteria group	Firmicutes	2.08632	39.7	-	AFGR01	6	2298	1981	5/5/11	3/9/17	Contig	Institute for Genome Sciences	SAMN00792680	GCA_000212515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/212/515/GCA_000212515.2_ASM21251v2	-	GA47901
Helicobacter pylori	210	PRJDB4296	362565	Proteobacteria	delta/epsilon subdivisions	1.56787	38.9	chromosome:AP017359.1	-	1	1560	1524	1/18/17	1/18/17	Chromosome	"Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture"	SAMD00042487	GCA_002357835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/835/GCA_002357835.1_ASM235783v1	-	MKM1
Neisseria meningitidis OX99.30304	935592	PRJNA61071	61071	Proteobacteria	Betaproteobacteria	2.16261	51.5	-	AEQE01	128	2471	2073	3/3/11	3/21/17	Contig	University of Maryland School of Medicine	SAMN02470724	GCA_000191205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/205/GCA_000191205.2_ASM19120v2	21368196	OX99.30304
Streptococcus pyogenes ABC020033799	1439079	PRJNA233145	233145	Terrabacteria group	Firmicutes	1.78655	38.5	-	JJGY01	4	1795	1684	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567494	GCA_000630625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/625/GCA_000630625.1_Stre_pyog_ABC020033799_V1	-	ABC020033799
Leptospira interrogans serovar Copenhageni str. Fiocruz LV4234	1291348	PRJNA189016	189016	Spirochaetes	Spirochaetia	4.59835	35	-	AOVA01	168	4114	3760	3/1/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01920568	GCA_000343835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/343/835/GCA_000343835.1_CA_glsol161	-	Fiocruz LV4234
Bacillus anthracis	1392	PRJNA336484	336484	Terrabacteria group	Firmicutes	5.46536	35.1	-	MVKH01	89	6096	5736	3/13/17	3/15/17	Contig	National Center for Disease Control and Public Health (NCDC) of Georgia	SAMN05511396	GCA_002025375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/375/GCA_002025375.1_ASM202537v1	-	Ba-1897/12-Geo
Shigella flexneri Shi06HN244	1434141	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.51292	50.5	-	AZOT01	322	5052	4333	1/29/14	2/23/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437376	GCA_000565765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/765/GCA_000565765.1_ASM56576v1	-	Shi06HN244
Pseudomonas aeruginosa	287	PRJNA320096	320096	Proteobacteria	Gammaproteobacteria	6.3499	66.4	chromosome:NZ_CP015648.1/CP015648.1	-	1	6010	5797	5/2/17	5/6/17	Chromosome	Universidad de los Andes	SAMN04916455	GCA_002116985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/116/985/GCA_002116985.1_ASM211698v1	-	M8A4
Acinetobacter baumannii BIDMC 57	1439317	PRJNA234145	234145	Proteobacteria	Gammaproteobacteria	4.12469	38.9	-	JMUI01	4	3983	3679	5/19/14	3/16/17	Scaffold	Broad Institute	SAMN02581278	GCA_000694975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/975/GCA_000694975.1_Acin_baum_BIDMC_57_V1	-	BIDMC 57
Streptococcus agalactiae LMG 15091	1154820	PRJNA86281	86281	Terrabacteria group	Firmicutes	2.0609	35.4	-	ALQX01	36	2158	2025	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991128	GCA_000288935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/935/GCA_000288935.1_ASM28893v1	-	LMG 15091
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	1.98057	41.2	-	CEIP01	75	1967	1878	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234017	GCA_000936385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/385/GCA_000936385.1_Velvet_assembly	-	S15U
Pseudomonas syringae pv. rhaphiolepidis	264457	PRJNA287460	287460	Proteobacteria	Gammaproteobacteria	5.61545	58.3	-	LIHV01	291	5506	4725	1/25/16	4/11/17	Contig	University of Edinburgh	SAMN03992217	GCA_001535835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/835/GCA_001535835.1_ASM153583v1	27145446	CFBP 4220
Legionella pneumophila	446	PRJNA281288	281288	Proteobacteria	Gammaproteobacteria	3.55624	38.3	-	LBAT01	44	3256	3101	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03486942	GCA_001582785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/785/GCA_001582785.1_ASM158278v1	26888563	BJ-9
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.91074	50.8	-	NQDW01	126	5166	4772	8/11/17	8/15/17	Contig	JCVI	SAMN07450709	GCA_002248355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/355/GCA_002248355.1_ASM224835v1	-	ECPSTH04
Bacteroides fragilis	817	PRJNA267549	267549	FCB group	Bacteroidetes/Chlorobi group	9.86128	48.1	-	JUPK01	5702	-	-	7/10/15	7/13/16	Contig	University of Washington	SAMN03198090	GCA_001058745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/745/GCA_001058745.1_ASM105874v1	26230489	884_BFRA
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.11551	67.2	-	MUTV01	110	6667	6356	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001922	GCA_001992535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/535/GCA_001992535.1_ASM199253v1	-	VC14802
Burkholderia pseudomallei	28450	PRJNA244402	244402	Proteobacteria	Betaproteobacteria	7.3805	67.8	-	JOTZ01	3	7724	6994	9/23/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02864943	GCA_000757245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/245/GCA_000757245.1_BEH	25414490	BEH
Chlamydia trachomatis	813	PRJDB4200	295282	PVC group	Chlamydiae	1.04671	41.3	-	BCAM01	14	972	911	9/9/15	3/26/17	Contig	Hokkaido University	SAMD00040428	GCA_001293965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/965/GCA_001293965.1_ASM129396v1	26494683	male54
Bacillus thuringiensis serovar kumamtoensis	132267	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.68556	34.6	-	NFEH01	134	7087	6581	5/17/17	5/24/17	Contig	Huazhong Agricultural University	SAMN05934559	GCA_002147415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/415/GCA_002147415.1_ASM214741v1	-	BGSC 4W1
Vibrio cholerae O1 str. 116063	1095662	PRJNA76259	76259	Proteobacteria	Gammaproteobacteria	3.97038	47.7	-	APFK01	144	3795	3566	3/22/13	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00989311	GCA_000348065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/065/GCA_000348065.2_ASM34806v2	-	116063
Clostridioides difficile CD206	1151303	PRJNA85781	85781	Terrabacteria group	Firmicutes	4.05113	28.4	-	AVIH01	95	3731	3545	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766604	GCA_000449685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/685/GCA_000449685.2_ASM44968v2	-	CD206
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.85694	32.3	-	MRJM01	96	2015	1555	4/19/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03774150	GCA_002100685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/685/GCA_002100685.1_ASM210068v1	28348839	FSC599
Brucella abortus RB51-AHVLA	1198700	PRJNA179135	179135	Proteobacteria	Alphaproteobacteria	3.28669	57.2	-	AQIE01	2	3380	3159	4/16/13	3/23/17	Contig	Broad Institute	SAMN01047752	GCA_000366025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/025/GCA_000366025.1_Bruc_abor_RB51_V1	-	RB51-AHVLA
Xanthomonas oryzae pv. oryzae	64187	PRJNA269468	269468	Proteobacteria	Gammaproteobacteria	4.30636	63.9	-	JXGM01	433	4364	3454	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252569	GCA_001928855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/855/GCA_001928855.1_ASM192885v1	-	IXO599
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.89157	38.1	-	MLMR01	206	1954	1723	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297057	GCA_001868495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/495/GCA_001868495.1_ASM186849v1	27118061	AWRIB344
Vibrio parahaemolyticus S163	1394696	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.17023	45.3	-	AWHQ01	510	4897	4660	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02339010	GCA_000489215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/215/GCA_000489215.1_S163	-	S163
Bacillus subtilis	1423	PRJNA322230	322230	Terrabacteria group	Firmicutes	4.16586	43.9	-	LYMC01	3	4264	3973	8/30/16	3/28/17	Contig	Nanjing Agricultural University	SAMN05139959	GCA_001717105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/105/GCA_001717105.1_ASM171710v1	-	fmb60
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.82309	32.8	chromosome:NZ_CP007539.1/CP007539.1	-	1	2933	2762	4/11/14	3/3/17	Complete Genome	US Food and Drug Administration 	SAMN02700075	GCA_000626615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/615/GCA_000626615.1_ASM62661v1	-	NRS 100
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	4.02519	27.9	-	LFOQ01	86	3875	3692	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779958	GCA_001573335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/335/GCA_001573335.1_ASM157333v1	26939550	Hall 4834
Enterococcus faecalis EnGen0069	1151211	PRJNA85673	85673	Terrabacteria group	Firmicutes	3.32938	37.1	-	AIJJ01	32	3503	3329	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00792317	GCA_000390985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/985/GCA_000390985.1_Ente_faec_B1376_V1	-	B1376
Streptococcus mutans 1SM1	857151	PRJNA49761	49761	Terrabacteria group	Firmicutes	2.06848	36.6	-	AHRK01	102	1966	1871	2/11/13	3/24/17	Contig	Cornell University	SAMN02429082	GCA_000339655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/655/GCA_000339655.1_ASM33965v1	23228887	1SM1
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.15404	52.4	-	CQND01	69	2533	2207	3/23/15	4/11/17	Contig	SC	SAMEA1690446	GCA_001115505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/505/GCA_001115505.1_8727_8_86	-	GCGS182
Enterococcus faecium EnGen0028	1138902	PRJNA82455	82455	Terrabacteria group	Firmicutes	2.88803	38.5	-	AHXD01	5	2900	2657	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779815	GCA_000321885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/885/GCA_000321885.1_Ente_faec_E1604_V1	-	E1604
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.86845	66.3	-	JVEU01	114	4572	4418	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197690	GCA_001071195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/195/GCA_001071195.1_ASM107119v1	26230489	498_SMAL
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12601	41.2	-	CWBZ01	74	2056	1876	6/24/15	3/26/17	Contig	SC	SAMEA1032886	GCA_001177145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/145/GCA_001177145.1_6903_5_85	-	EQUI0134
Pasteurella multocida subsp. septica	115545	PRJNA355236	355236	Proteobacteria	Gammaproteobacteria	2.27027	40.2	-	MTIJ01	13	2163	2074	3/8/17	3/10/17	Scaffold	INRA	SAMN06140949	GCA_002024045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/045/GCA_002024045.1_ASM202404v1	-	CIRMBP-0906
Lactobacillus rhamnosus	47715	PRJNA286713	286713	Terrabacteria group	Firmicutes	3.00415	46.7	-	LPNT01	62	3115	2711	4/21/17	4/24/17	Scaffold	University of Helsinki	SAMN03769471	GCA_002103145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/145/GCA_002103145.1_ASM210314v1	-	Lrh39
Brucella melitensis bv. 3	644340	PRJNA242605	242605	Proteobacteria	Alphaproteobacteria	3.28436	57.2	-	JMKL01	102	3392	3127	5/7/14	4/2/17	Contig	National Institute of Animal Biotechnology	SAMN02699098	GCA_000685375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/375/GCA_000685375.1_BMIND1_v1	24874680	BM IND1
Staphylococcus aureus subsp. aureus 6850	1392476	PRJNA216988	216988	Terrabacteria group	Firmicutes	2.73656	32.8	chromosome:NC_022222.1/CP006706.1	-	1	2805	2593	8/30/13	3/2/17	Complete Genome	University of Wuerzburg	SAMN02604264	GCA_000462955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/955/GCA_000462955.1_ASM46295v1	24072870	6850
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.40416	53.6	-	LSXC01	48	2328	2107	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497021	GCA_002202845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/845/GCA_002202845.1_S88	-	5162
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.42079	47	-	CWIS01	140	4133	3878	7/6/15	3/26/17	Scaffold	SC	SAMEA980191	GCA_001182165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/165/GCA_001182165.1_4976_7_3	-	H324/78
Serratia marcescens subsp. marcescens	211759	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.10248	59.5	-	JVCS01	83	4871	4715	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197744	GCA_001065405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/405/GCA_001065405.1_ASM106540v1	26230489	546_SSON
Lactobacillus plantarum	1590	PRJNA313912	313912	Terrabacteria group	Firmicutes	3.13133	44.4	-	LUWG01	142	3112	2874	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04525446	GCA_001639525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/525/GCA_001639525.1_ASM163952v1	-	Nizo2258
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66056	31.4	-	CUPO01	14	1718	1626	3/31/15	3/18/17	Contig	SC	SAMEA1010251	GCA_001234005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/005/GCA_001234005.1_7092_1_24	-	OXC6471
Burkholderia sp. Bk	1938441	PRJNA361918	361918	Proteobacteria	Betaproteobacteria	7.33728	61.9	-	NHOM01	41	6567	6391	6/15/17	6/19/17	Scaffold	CONICET-CINDEFI- La Plata	SAMN06235020	GCA_002196005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/005/GCA_002196005.1_ASM219600v1	-	Bk
Propionibacterium acnes JCM 18909	1302241	PRJDB915	235275	Terrabacteria group	Actinobacteria	2.57382	59.9	-	BAVM01	95	3797	3752	1/15/14	9/15/15	Contig	The University of Tokyo	SAMD00006340	GCA_000521385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/385/GCA_000521385.1_ASM52138v1	-	JCM 18909
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.53742	32.6	-	CUGL01	102	2542	2391	3/31/15	4/21/17	Scaffold	SC	SAMEA1035110	GCA_001226805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/805/GCA_001226805.1_7068_7_43	-	121875
Enterobacter cloacae subsp. cloacae	336306	PRJNA362587	362587	Proteobacteria	Gammaproteobacteria	5.03433	55.1	-	MWMD01	15	4915	4690	4/11/17	4/13/17	Contig	University of Cambridge	SAMN06269461	GCA_002086975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/975/GCA_002086975.1_ASM208697v1	-	CAPREX_E7
Cronobacter sakazakii	28141	PRJNA247774	247774	Proteobacteria	Gammaproteobacteria	4.13678	57	-	JNBI01	197	3971	3279	1/25/17	4/6/17	Scaffold	"Nottingham Trent University, UK"	SAMN02780905	GCA_001971135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/135/GCA_001971135.1_ASM197113v1	-	520
Mycobacterium abscessus	36809	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.15938	64.2	-	NEGP01	40	5196	5019	5/16/17	5/24/17	Contig	University of Michigan Medical School	SAMN06806048	GCA_002142775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/775/GCA_002142775.1_ASM214277v1	-	FLAC053
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.131	67.5	-	LPCJ01	97	6416	6089	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449398	GCA_001528445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/445/GCA_001528445.1_ASM152844v1	-	MSMB2024WGS
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.97492	38.7	-	NGEB01	91	3842	3666	5/15/17	5/23/17	Contig	JCVI	SAMN06837747	GCA_002138225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/225/GCA_002138225.1_ASM213822v1	-	PR339
Enterobacter hormaechei	158836	PRJNA223618	223618	Proteobacteria	Gammaproteobacteria	5.10816	54.6	-	LBLX01	56	5031	4757	4/29/15	3/26/17	Contig	J. Craig Venter Institute	SAMN03486506	GCA_000981975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/975/GCA_000981975.1_ASM98197v1	-	MRSN 11248
Klebsiella aerogenes	548	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.17716	55.1	-	JVVP01	81	5038	4819	7/10/15	4/6/17	Scaffold	University of Washington	SAMN03197253	GCA_001053235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/235/GCA_001053235.1_ASM105323v1	26230489	1282_EAER
Pseudomonas sp. GM21	1144325	PRJNA83073	83073	Proteobacteria	Gammaproteobacteria	6.60927	58.5	-	AKJS01	210	6102	5820	7/27/12	5/19/17	Contig	Oak Ridge National Lab	SAMN00839633	GCA_000282215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/215/GCA_000282215.1_Pseudomonas.strGM21_v1.0	23045501	GM21
Streptomyces sp. Root264	1736503	PRJNA297942	297942	Terrabacteria group	Actinobacteria	9.01545	71.6	-	LMIZ01	86	7991	7317	11/2/15	3/12/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04155772	GCA_001428885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/428/885/GCA_001428885.1_Root264	26633631	Root264
Bacillus sp. JCM 19035	1460653	PRJDB1631	243825	Terrabacteria group	Firmicutes	4.32979	41	-	BAXP01	49	5039	3397	10/1/15	8/8/17	Contig	"Microbe Division/JCM, RIKEN BioResource Center"	SAMD00000373	GCA_001310595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/595/GCA_001310595.1_ASM131059v1	-	JCM 19035
Acinetobacter sp. 25977_3	1310907	PRJNA194984	194984	Proteobacteria	Gammaproteobacteria	4.07126	38.7	-	JFVN01	85	4127	3753	3/11/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02570338	GCA_000589175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/175/GCA_000589175.1_ASM58917v1	-	25977_3
Clostridium sp. CAG:568	1262821	PRJEB937	206799	Terrabacteria group	Firmicutes	1.4805	34.9	-	CBBS01	72	1257	1211	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138607	GCA_000434395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/395/GCA_000434395.1_MGS568	-	-
Sphingomonas sp. CCH15-A1	1768790	PRJNA299404	299404	Proteobacteria	Alphaproteobacteria	4.51203	67.5	-	LSKO01	3040	-	-	2/10/16	2/10/16	Contig	Georgia Institute of Technology	SAMN04299491	GCA_001557085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/085/GCA_001557085.1_ASM155708v1	-	CCH15-A1
Rhodococcus sp. 15-2388-1-1a	2023142	PRJNA395383	395383	Terrabacteria group	Actinobacteria	6.21459	64.5	-	NPFP01	55	5896	5732	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07414579	GCA_002259145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/145/GCA_002259145.1_ASM225914v1	-	15-2388-1-1a
Enterobacter cloacae complex sp. GN06232	1820023	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.62424	55.7	-	LVVA01	24	4478	4289	4/25/16	4/12/17	Contig	JCVI	SAMN04578344	GCA_001631805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/805/GCA_001631805.1_ASM163180v1	-	GN06232
Staphylococcus sp. HMSC062A05	1715061	PRJNA296189	296189	Terrabacteria group	Firmicutes	2.55881	33.7	-	LTQF01	41	2450	2374	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498588	GCA_001836835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/835/GCA_001836835.1_ASM183683v1	-	HMSC062A05
Corynebacterium sp. NML130628	1906333	PRJNA344575	344575	Terrabacteria group	Actinobacteria	2.30473	60.1	-	MLAL01	45	2141	2020	11/10/16	4/16/17	Contig	Public Health Agency of Canada	SAMN05859799	GCA_001875665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/665/GCA_001875665.1_ASM187566v1	-	NML130628
Streptococcus sp. SR4	1161417	PRJNA165945	165945	Terrabacteria group	Firmicutes	2.17454	39.8	-	AZYW01	77	2018	1920	1/13/14	4/9/17	Contig	JCVI	SAMN02597444	GCA_000517725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/725/GCA_000517725.1_SspSR4v1.0	-	SR4
Mycobacterium sp. 852002-10379_SCH5584320	1834086	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.66169	68.6	-	LZID01	91	5454	5256	6/17/16	4/13/17	Contig	JCVI	SAMN04696138	GCA_001667465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/465/GCA_001667465.1_ASM166746v1	-	852002-10379_SCH5584320
Paenibacillus sp. cl123	1761875	PRJEB15741	347676	Terrabacteria group	Firmicutes	7.26759	54.8	-	FMYY01	54	6095	5855	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488602	GCA_900101595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/595/GCA_900101595.1_IMG-taxon_2636416068_annotated_assembly	-	CL123
Prochlorococcus sp. scB243_496N4	1471482	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.45396	31.4	-	JFMG01	377	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671353	GCA_000635555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/555/GCA_000635555.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Rhizobium sp. JGI 001012-K08	1167747	PRJNA177739	177739	Proteobacteria	Alphaproteobacteria	0.896722	59.3	-	ATZL02	40	-	-	7/15/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441566	GCA_000428185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/185/GCA_000428185.2_ASM42818v2	-	JGI 001012-K08
Rhizobium sp. JGI 001013-F22	1167748	PRJNA175202	175202	Proteobacteria	Alphaproteobacteria	2.31878	59.5	-	AUSB02	156	-	-	7/17/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441129	GCA_000438905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/905/GCA_000438905.2_ASM43890v2	-	JGI 001013-F22
Prochlorococcus sp. scB243_497E17	1471483	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.552203	31.8	-	JFMH01	154	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671354	GCA_000635575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/575/GCA_000635575.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Paenibacillus sp. cl6col	1761878	PRJEB15807	347781	Terrabacteria group	Firmicutes	6.46157	46.6	-	FNAZ01	29	5676	5434	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488689	GCA_900102125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/125/GCA_900102125.1_IMG-taxon_2636416071_annotated_assembly	-	CL6Col
Mycobacterium sp. ACS1612	1834117	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.79973	66.2	-	LZHZ01	76	6598	6344	6/17/16	4/13/17	Contig	JCVI	SAMN04634262	GCA_001667505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/505/GCA_001667505.1_ASM166750v1	-	ACS1612
Streptococcus sp. BS29a	1161415	PRJNA165933	165933	Terrabacteria group	Firmicutes	1.93719	41	-	AZYV01	26	1906	1824	1/13/14	4/9/17	Contig	JCVI	SAMN02597443	GCA_000517765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/765/GCA_000517765.1_SspBS29av1.0	-	BS29a
Corynebacterium sp. NML140438	1906334	PRJNA344575	344575	Terrabacteria group	Actinobacteria	2.33317	60.6	-	MLCQ01	31	2216	2116	11/10/16	4/14/17	Contig	Public Health Agency of Canada	SAMN05859800	GCA_001875725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/725/GCA_001875725.1_ASM187572v1	-	NML140438
Staphylococcus sp. HMSC062C03	1715178	PRJNA296306	296306	Terrabacteria group	Firmicutes	2.4134	32.7	-	LTQE01	80	2367	2271	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498695	GCA_001836865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/865/GCA_001836865.1_ASM183686v1	-	HMSC062C03
Enterobacter sp. ku-bf2	1888167	PRJNA338214	338214	Proteobacteria	Gammaproteobacteria	4.8239	55.7	-	MDVW01	24	4665	4473	9/23/16	4/13/17	Contig	osmania University	SAMN05526267	GCA_001742765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/765/GCA_001742765.1_ASM174276v1	-	ku-bf2
Rhodococcus sp. 14-2483-1-1	2023148	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.77835	64.3	-	NPFX01	36	5421	5292	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07414571	GCA_002259335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/335/GCA_002259335.1_ASM225933v1	-	14-2483-1-1
Sphingomonas sp. 28-66-16	1970435	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	3.13625	66	-	NCGF01	51	2966	2887	8/16/17	8/16/17	Contig	None	SAMN06622301	GCA_002281485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/485/GCA_002281485.1_ASM228148v1	-	-
Clostridium sp. CAG:533	1262818	PRJEB922	206734	Terrabacteria group	Firmicutes	0.997205	29.6	-	CBCA01	37	1001	969	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138612	GCA_000434495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/495/GCA_000434495.1_MGS533	-	-
Acinetobacter sp. 25977_4	1310908	PRJNA194985	194985	Proteobacteria	Gammaproteobacteria	4.05585	38.7	-	JFVM01	107	4106	3710	3/11/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02570339	GCA_000589215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/215/GCA_000589215.1_ASM58921v1	-	25977_4
Bacillus sp. JCM 19034	1481928	PRJDB1710	252073	Terrabacteria group	Firmicutes	3.96217	37.2	-	BAXR01	68	4132	3157	10/1/15	4/11/17	Contig	The University of Tokyo	SAMD00000372	GCA_001310635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/635/GCA_001310635.1_ASM131063v1	-	JCM 19034
Streptomyces sp. MBT76	1488406	PRJNA301664	301664	Terrabacteria group	Actinobacteria	8.63983	72.1	-	LNBE01	13	7458	7072	11/18/15	3/13/17	Scaffold	Institute of Biology Leiden	SAMN04253747	GCA_001445655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/655/GCA_001445655.1_ASM144565v1	27073352	MBT76
Pseudomonas sp. GM25	1144327	PRJNA83077	83077	Proteobacteria	Gammaproteobacteria	6.35061	60.9	-	AKJQ01	91	5766	5617	7/27/12	5/24/17	Contig	Oak Ridge National Lab	SAMN00839636	GCA_000282255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/255/GCA_000282255.1_Pseudomonas.strGM25_v1.0	23045501	GM25
Klebsiella aerogenes	548	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.21946	55.1	-	JWGB01	207	5104	4904	7/10/15	4/6/17	Scaffold	University of Washington	SAMN03196981	GCA_001053595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/595/GCA_001053595.1_ASM105359v1	26230489	1019_EAER
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.64533	55.7	-	LDCD01	36	4459	4303	5/21/15	3/26/17	Contig	JCVI	SAMN03495966	GCA_001011695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/695/GCA_001011695.1_ASM101169v1	-	GN02044
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.01077	38.7	-	NGFA01	109	3935	3734	5/15/17	5/23/17	Contig	JCVI	SAMN06837820	GCA_002138235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/235/GCA_002138235.1_ASM213823v1	-	PR393
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.1377	67.5	-	LPCK01	147	6449	6106	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449399	GCA_001528465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/465/GCA_001528465.1_ASM152846v1	-	MSMB2026WGS
Mycobacterium abscessus	36809	PRJNA315990	315990	Terrabacteria group	Actinobacteria	4.98948	64.1	-	NEGR01	41	5029	4873	5/16/17	5/24/17	Contig	University of Michigan Medical School	SAMN06806046	GCA_002142785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/785/GCA_002142785.1_ASM214278v1	-	FLAC051
Cronobacter sakazakii	28141	PRJNA247777	247777	Proteobacteria	Gammaproteobacteria	4.50708	56.8	-	JNBJ01	316	4373	3531	1/25/17	4/6/17	Scaffold	"Nottingham Trent University, UK"	SAMN02780907	GCA_001971195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/195/GCA_001971195.1_ASM197119v1	-	553
Enterobacter cloacae subsp. cloacae	336306	PRJNA362587	362587	Proteobacteria	Gammaproteobacteria	5.02899	55.1	-	MWME01	21	4918	4689	4/11/17	4/13/17	Contig	University of Cambridge	SAMN06269473	GCA_002087055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/055/GCA_002087055.1_ASM208705v1	-	CAPREX E2-2
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.51392	32.6	-	CUHE01	62	2496	2329	3/31/15	3/26/17	Scaffold	SC	SAMEA1035127	GCA_001227045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/045/GCA_001227045.1_7068_7_63	-	127639
Propionibacterium acnes JCM 18916	1302242	PRJDB916	235276	Terrabacteria group	Actinobacteria	2.51475	60	-	BAVN01	48	3711	3663	1/15/14	9/15/15	Contig	The University of Tokyo	SAMD00003352	GCA_000521405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/405/GCA_000521405.1_ASM52140v1	-	JCM 18916
Burkholderia sp. IDO3	1705310	PRJNA407406	407406	Proteobacteria	Betaproteobacteria	7.95293	66.4	-	NWSG01	90	7545	7163	9/25/17	9/25/17	Scaffold	Dalian University of Technology	SAMN07653192	GCA_002355095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/095/GCA_002355095.1_ASM235509v1	-	IDO3
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.68278	31.4	-	CUOH01	14	1746	1646	3/31/15	3/18/17	Contig	SC	SAMEA1010280	GCA_001234805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/805/GCA_001234805.1_7065_7_80	-	OXC6428
Lactobacillus plantarum	1590	PRJNA313914	313914	Terrabacteria group	Firmicutes	3.43062	44.3	-	LUWH01	109	3395	3177	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04525553	GCA_001639545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/545/GCA_001639545.1_ASM163954v1	-	Nizo2259
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.46378	59	-	JUXW01	338	5273	5050	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197870	GCA_001065845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/845/GCA_001065845.1_ASM106584v1	26230489	666_SMAR
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.42721	46.9	-	CWHT01	459	4209	3892	7/1/15	3/26/17	Scaffold	SC	SAMEA980193	GCA_001182185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/185/GCA_001182185.1_4976_7_1	-	H608/87
Corynebacterium diphtheriae bv. mitis	1806053	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.37725	53.6	-	LSXD01	34	2337	2136	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497020	GCA_002202895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/895/GCA_002202895.1_S89	-	5152
Staphylococcus aureus subsp. aureus HO 5096 0412	1074252	PRJEA71279	71279	Terrabacteria group	Firmicutes	2.8323	32.8	chromosome:NC_017763.1/HE681097.1	-	1	2936	2750	4/23/12	3/2/17	Complete Genome	Wellcome Trust Sanger Insititute	SAMEA2272552	GCA_000284535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/535/GCA_000284535.1_ASM28453v1	23299977	HO 5096 0412
Brucella melitensis	29459	PRJEB7504	276251	Proteobacteria	Alphaproteobacteria	3.29236	57.2	-	CDGF01	28	3396	2946	2/24/15	4/10/17	Contig	Tropical Infectious Diseases Research and Education Centre	SAMEA2815451	GCA_000938035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/035/GCA_000938035.1_Brucella_melitensis_Phil1136_12	-	-
Lactobacillus rhamnosus	47715	PRJNA286713	286713	Terrabacteria group	Firmicutes	3.08836	46.7	-	LPNW01	71	3209	2912	4/21/17	4/24/17	Scaffold	University of Helsinki	SAMN03766748	GCA_002103215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/215/GCA_002103215.1_ASM210321v1	-	Lrh46
Pasteurella multocida subsp. septica	115545	PRJNA355236	355236	Proteobacteria	Gammaproteobacteria	2.27222	40.2	-	MTIE01	15	2162	2074	3/8/17	3/11/17	Scaffold	INRA	SAMN06140938	GCA_002024065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/065/GCA_002024065.1_ASM202406v1	-	CIRMBP-0747
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12689	41.2	-	CWDX01	76	2044	1875	6/24/15	3/26/17	Contig	SC	SAMEA1032887	GCA_001177165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/165/GCA_001177165.1_6903_8_50	-	EQUI0195
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.95362	66	-	JVDB01	114	4554	4358	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197735	GCA_001071285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/285/GCA_001071285.1_ASM107128v1	26230489	539_SMAL
Enterococcus faecium EnGen0029	1138903	PRJNA82457	82457	Terrabacteria group	Firmicutes	2.91896	38.4	-	AHXE01	11	2942	2672	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779816	GCA_000321905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/905/GCA_000321905.1_Ente_faec_E1613_V1	-	E1613
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14367	52.4	-	CQKY01	75	2498	2191	3/23/15	4/11/17	Contig	SC	SAMEA1690421	GCA_001116105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/105/GCA_001116105.1_8727_8_67	-	GCGS163
Streptococcus mutans 3SN1	857149	PRJNA49765	49765	Terrabacteria group	Firmicutes	2.03435	36.8	-	AHRM01	142	2028	1916	2/11/13	3/23/17	Contig	Cornell University	SAMN02429036	GCA_000339675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/675/GCA_000339675.1_ASM33967v1	23228887	3SN1
Enterococcus faecalis EnGen0070	1151212	PRJNA85675	85675	Terrabacteria group	Firmicutes	3.2731	37.2	-	AIJK01	23	3451	3270	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00792318	GCA_000391005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/005/GCA_000391005.1_Ente_faec_B1385_V1	-	B1385
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.97103	28	-	LFOS01	84	3828	3636	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779960	GCA_001573375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/375/GCA_001573375.1_ASM157337v1	26939550	Hall 8857Ab
Staphylococcus aureus subsp. aureus VC40	1028799	PRJNA66591	66591	Terrabacteria group	Firmicutes	2.69257	32.8	chromosome:NC_016912.1/CP003033.1	-	1	2790	2640	2/1/12	3/2/17	Complete Genome	"Institute of Medical Microbiology, Immunology and Parasitology (IMMIP), University of Bonn, Sigmund-Freud-Str. 25, 53105 Bonn, Germany"	SAMN02603393	GCA_000245495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/495/GCA_000245495.1_ASM24549v1	22461548	VC40
Bacillus subtilis	1423	PRJNA254928	254928	Terrabacteria group	Firmicutes	4.0886	43.7	-	JWHO01	52	4251	4093	9/22/16	3/28/17	Contig	National Institutes for Food and Drug Control	SAMN02903557	GCA_001742355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/355/GCA_001742355.1_ASM174235v1	26383601	CGMCC63528
Vibrio parahaemolyticus S162	1394695	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.04091	45.3	-	AWHR01	513	4800	4564	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02339009	GCA_000489235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/235/GCA_000489235.1_S162	-	S162
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.88638	38.1	-	MLMS01	325	1948	1686	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297058	GCA_001868525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/525/GCA_001868525.1_ASM186852v1	27118061	AWRIB345
Xanthomonas oryzae pv. oryzae	64187	PRJNA269470	269470	Proteobacteria	Gammaproteobacteria	4.27638	63.9	-	JXGO01	423	4292	3455	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252578	GCA_001928905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/905/GCA_001928905.1_ASM192890v1	-	IXO608
Brucella abortus 65/110	1160209	PRJNA173631	173631	Proteobacteria	Alphaproteobacteria	3.28159	57.2	-	AQLL01	11	3354	3114	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811225	GCA_000366105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/105/GCA_000366105.1_Bruc_abor_65_110_V1	-	65/110
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.851	32.3	-	MRJU01	96	2009	1557	4/19/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773913	GCA_002100705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/705/GCA_002100705.1_ASM210070v1	28348839	FSC027
Clostridioides difficile CD211	1151304	PRJNA85783	85783	Terrabacteria group	Firmicutes	4.05479	28.4	-	AVII01	187	3835	3632	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766606	GCA_000449705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/705/GCA_000449705.2_ASM44970v2	-	CD211
Vibrio cholerae O1 str. 87395	1095659	PRJNA76253	76253	Proteobacteria	Gammaproteobacteria	3.85811	47.3	-	APFL01	180	3697	3439	3/22/13	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00989303	GCA_000348085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/085/GCA_000348085.2_ASM34808v2	-	87395
Bacillus thuringiensis serovar tohokuensis	180890	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.88983	35.2	-	NFEG01	226	6394	5805	5/17/17	6/15/17	Contig	Huazhong Agricultural University	SAMN05934558	GCA_002147425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/425/GCA_002147425.1_ASM214742v1	-	BGSC 4V1
Chlamydia trachomatis	813	PRJEB2035	203744	PVC group	Chlamydiae	1.11584	41.1	-	CVNC01	47	1072	935	4/21/15	3/26/17	Contig	SC	SAMEA1008240	GCA_001317745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/745/GCA_001317745.1_7054_3_87	-	LGV913
Burkholderia pseudomallei	28450	PRJNA244535	244535	Proteobacteria	Betaproteobacteria	7.29826	68	-	JOUA01	2	7516	6987	9/23/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02866195	GCA_000757255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/255/GCA_000757255.1_BGJ	25414490	BGJ
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.56641	67.2	-	MUTT01	67	7065	6767	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001920	GCA_001992555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/555/GCA_001992555.1_ASM199255v1	-	VC14584
Bacteroides fragilis	817	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.59173	43.2	-	DCKC01	38	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452875	GCA_002320205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/205/GCA_002320205.1_ASM232020v1	28894102	-
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.89314	50.7	-	NQDZ01	127	5110	4743	8/11/17	8/15/17	Contig	JCVI	SAMN07450706	GCA_002248385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/385/GCA_002248385.1_ASM224838v1	-	ECPSTH07
Legionella pneumophila	446	PRJNA281292	281292	Proteobacteria	Gammaproteobacteria	3.49333	38.2	-	LBAU01	31	3209	3073	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03486946	GCA_001582795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/795/GCA_001582795.1_ASM158279v1	26888563	WX2012012
Pseudomonas syringae pv. syringae	321	PRJNA287460	287460	Proteobacteria	Gammaproteobacteria	6.12236	59.2	-	LIHU01	68	5526	5174	1/25/16	3/27/17	Contig	University of Edinburgh	SAMN03992218	GCA_001535855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/855/GCA_001535855.1_ASM153585v1	27145446	2339
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03769	41.2	-	CEHL01	63	2022	1918	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233954	GCA_000936515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/515/GCA_000936515.1_Velvet_assembly	-	LS8U
Streptococcus agalactiae LMG 15092	1154821	PRJNA86283	86283	Terrabacteria group	Firmicutes	2.04724	35.2	-	ALQY01	80	2222	1982	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991125	GCA_000288955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/955/GCA_000288955.1_ASM28895v1	-	LMG 15092
Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841	575584	PRJNA243515	243515	Proteobacteria	Gammaproteobacteria	3.95522	39.1	-	JMRY01	2	3804	3669	7/28/14	3/16/17	Scaffold	Los Alamos National Laboratory	SAMN02767370	GCA_000737145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/145/GCA_000737145.1_ASM73714v1	25146140	ATCC 19606
Pseudomonas aeruginosa	287	PRJNA320098	320098	Proteobacteria	Gammaproteobacteria	6.49944	66.1	chromosome:NZ_CP015649.1/CP015649.1	-	1	6170	5920	5/2/17	6/15/17	Chromosome	Universidad de los Andes	SAMN04916457	GCA_002117025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/025/GCA_002117025.1_ASM211702v1	-	M28A1
Shigella flexneri Shi06GS37	1434142	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.52043	50.5	-	AZOU01	297	5027	4322	1/29/14	2/23/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437377	GCA_000565785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/785/GCA_000565785.1_ASM56578v1	-	Shi06GS37
Bacillus anthracis	1392	PRJNA336484	336484	Terrabacteria group	Firmicutes	5.37229	35.2	-	MVKD01	83	5990	5653	3/13/17	3/15/17	Contig	National Center for Disease Control and Public Health (NCDC) of Georgia	SAMN05511402	GCA_002025395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/395/GCA_002025395.1_ASM202539v1	-	Ba-8782/92-Geo
Leptospira interrogans serovar Pomona str. CSL10083	1240692	PRJNA177161	177161	Spirochaetes	Spirochaetia	4.57439	35	-	AOHJ01	182	4164	3661	3/14/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01886735	GCA_000346695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/695/GCA_000346695.1_gls454200v02	-	CSL10083
Streptococcus pyogenes ABC020033193	1439076	PRJNA233143	233143	Terrabacteria group	Firmicutes	1.8111	38.6	-	JJGZ01	8	1833	1699	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567492	GCA_000630645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/645/GCA_000630645.1_Stre_pyog_ABC020033193_V1	-	ABC020033193
Neisseria meningitidis M6190	935587	PRJNA61061	61061	Proteobacteria	Betaproteobacteria	2.21311	51.6	-	AEQF01	46	2603	2241	3/3/11	3/15/17	Contig	University of Maryland School of Medicine	SAMN02470736	GCA_000191225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/225/GCA_000191225.2_ASM19122v2	21368196	M6190
Helicobacter pylori	210	PRJDB4296	362565	Proteobacteria	delta/epsilon subdivisions	1.57712	38.9	chromosome:AP017362.1	-	1	1553	1519	1/18/17	1/18/17	Chromosome	"Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture"	SAMD00042489	GCA_002357855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/855/GCA_002357855.1_ASM235785v1	-	MKM6
Streptococcus pneumoniae GA41317	760810	PRJNA48779	48779	Terrabacteria group	Firmicutes	2.0908	39.7	-	AFGT01	6	2302	1983	5/5/11	3/9/17	Contig	Institute for Genome Sciences	SAMN00792779	GCA_000212555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/212/555/GCA_000212555.2_ASM21255v2	-	GA41317
Staphylococcus aureus subsp. aureus T0131	1006543	PRJNA65323	65323	Terrabacteria group	Firmicutes	2.9139	32.8	chromosome:NC_017347.1/CP002643.1	-	1	3056	2878	4/19/11	3/2/17	Complete Genome	"TEDA School of Biological Sciences and Biotechnology, Nankai University"	SAMN02603905	GCA_000204665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/665/GCA_000204665.1_ASM20466v1	21551295	T0131
Mycobacterium tuberculosis BTB05-559	882100	PRJNA51873	51873	Terrabacteria group	Actinobacteria	4.34246	65.3	chromosome:NZ_CM001227.1/CM001227.1	AEGD01	1	4330	4095	6/28/11	5/18/17	Chromosome	"Uppsala University, dep. of Medical Biochemistry and Microbiology"	SAMN02472033	GCA_000220455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/455/GCA_000220455.1_ASM22045v1	21304944	BTB05-559
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.89213	38	-	FFIP01	17	1909	1780	2/9/16	3/27/17	Scaffold	SC	SAMEA2674771	GCA_900029335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/335/GCA_900029335.1_14412_4_52	-	2842STDY5882080
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.51499	68.8	-	BDOD01	299	5263	4947	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076693	GCA_002089795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/795/GCA_002089795.1_ASM208979v1	28045086	TR-M-2
Bacillus cereus BAG4X12-1	1053186	PRJNA70337	70337	Terrabacteria group	Firmicutes	5.82559	34.9	-	AHDG01	17	6117	5735	8/15/12	6/15/17	Scaffold	Broad Institute	SAMN02596818	GCA_000291415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/415/GCA_000291415.1_Baci_cere_BAG4X12-1_G13198_V1	-	BAG4X12-1
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.44931	32	-	JVOO01	96	2396	2302	7/10/15	3/26/17	Contig	University of Washington	SAMN03197436	GCA_001071935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/935/GCA_001071935.1_ASM107193v1	26230489	246_SEPI
Sulfurihydrogenibium azorense Az-Fu1	204536	PRJNA12529	12529	Aquificae	Aquificae	1.64088	32.8	chromosome:NC_012438.1/CP001229.1	-	1	1743	1673	3/25/09	4/17/17	Complete Genome	TIGR	SAMN02604030	GCA_000021545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/545/GCA_000021545.1_ASM2154v1	19136599	Az-Fu1
Pseudomonas fluorescens	294	PRJNA396133	396133	Proteobacteria	Gammaproteobacteria	6.28844	59.8	-	NPKB01	117	-	-	9/20/17	9/22/17	Scaffold	Italian National Research Council	SAMN07421152	GCA_002319065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/065/GCA_002319065.1_ASM231906v1	-	ITEM 17298
Yersinia pestis PY-09	992135	PRJNA64297	64297	Proteobacteria	Gammaproteobacteria	4.64503	47.5	-	AKRU01	541	4565	4195	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141456	GCA_000268425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/425/GCA_000268425.1_ASM26842v1	-	PY-09
Staphylococcus aureus RF122	273036	PRJNA63	63	Terrabacteria group	Firmicutes	2.74253	32.8	chromosome:NC_007622.1/AJ938182.1	-	1	2866	2591	11/24/05	3/2/17	Complete Genome	Univ. Minnesota	SAMEA3138186	GCA_000009005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/005/GCA_000009005.1_ASM900v1	17971880	RF122
Staphylococcus aureus subsp. aureus MW2	196620	PRJNA306	306	Terrabacteria group	Firmicutes	2.82046	32.8	chromosome:NC_003923.1/BA000033.2	-	1	2934	2778	5/31/02	3/2/17	Complete Genome	NITE	SAMD00061104	GCA_000011265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/265/GCA_000011265.1_ASM1126v1	12044378	MW2
Staphylococcus aureus subsp. aureus MRSA252	282458	PRJNA265	265	Terrabacteria group	Firmicutes	2.90262	32.8	chromosome:NC_002952.2/BX571856.1	-	1	3016	2819	11/6/01	3/2/17	Complete Genome	Sanger Institute	SAMEA1705935	GCA_000011505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/505/GCA_000011505.1_ASM1150v1	15213324	MRSA252
Sulfolobus tokodaii str. 7	273063	PRJNA246	246	TACK group	Crenarchaeota	2.69476	32.8	chromosome:NC_003106.2/BA000023.2	-	1	2951	2770	10/4/01	4/17/17	Complete Genome	NITE	SAMD00061096	GCA_000011205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/205/GCA_000011205.1_ASM1120v1	11572479	7
Staphylococcus aureus subsp. aureus Z172	1406863	PRJNA222409	222409	Terrabacteria group	Firmicutes	3.0183	32.798	chromosome:NC_022604.1/CP006838.1; plasmid pZ172_1:NC_022610.1/CP006839.1; plasmid pZ172_2:NC_022605.1/CP006840.1	-	3	3203	3014	10/29/13	3/2/17	Complete Genome	National Health Research Institutes	SAMN02370325	GCA_000485885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/885/GCA_000485885.1_ASM48588v1	24309740	Z172
Francisella philomiragia	28110	PRJNA260383	260383	Proteobacteria	Gammaproteobacteria	1.92406	32.7977	chromosome:NZ_CP009442.1/CP009442.1; plasmid pFPJ_1:NZ_CP009443.1/CP009443.1	-	2	1859	1789	2/6/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03024268	GCA_000833295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/295/GCA_000833295.1_ASM83329v1	25931589	O#319-036 [FSC 153]
Yersinia pestis PY-10	992136	PRJNA64299	64299	Proteobacteria	Gammaproteobacteria	4.74042	47.5	-	AKRV01	542	4622	4274	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141457	GCA_000268445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/445/GCA_000268445.1_ASM26844v1	-	PY-10
Pseudomonas fluorescens	294	PRJNA264995	264995	Proteobacteria	Gammaproteobacteria	5.72071	60.4	-	JSFL01	61	-	-	10/27/15	10/27/15	Scaffold	Indiana University	SAMN03144956	GCA_001414285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/285/GCA_001414285.1_ATCC948-1	25539726	ATCC 948 substr. 1
Staphylococcus aureus subsp. aureus TW20	663951	PRJEA36647	36647	Terrabacteria group	Firmicutes	3.07581	32.7972	chromosome:NC_017331.1/FN433596.1; plasmid pTW20_1:NC_017352.1/FN433597.1; plasmid pTW20_2:NC_017332.1/FN433598.1	-	3	3254	3075	11/25/09	3/2/17	Complete Genome	The Wellcome Trust Sanger Institute	SAMEA2272282	GCA_000027045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/027/045/GCA_000027045.1_ASM2704v1	19948800	TW20
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.44533	32	-	JVIW01	130	2382	2299	7/10/15	3/26/17	Contig	University of Washington	SAMN03197584	GCA_001072715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/715/GCA_001072715.1_ASM107271v1	26230489	393_SEPI
Bacillus cereus BAG4O-1	1053185	PRJNA70335	70335	Terrabacteria group	Firmicutes	5.72636	35.2	-	AHDF01	3	5929	5615	8/15/12	5/18/17	Scaffold	Broad Institute	SAMN02596817	GCA_000291435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/435/GCA_000291435.1_Baci_cere_BAG4O-1_G13205_V1	-	BAG4O-1
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.2795	69	-	BDOE01	352	5061	4716	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076694	GCA_002089815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/815/GCA_002089815.1_ASM208981v1	28045086	TR-M-3
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.86958	38	-	FFJA01	25	1906	1758	2/9/16	3/27/17	Scaffold	SC	SAMEA2674739	GCA_900029875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/875/GCA_900029875.1_14412_4_22	-	2842STDY5882050
Mycobacterium tuberculosis H37RvCO	757419	PRJNA47937	47937	Terrabacteria group	Actinobacteria	4.41288	65.2993	chromosome:NZ_CM001515.1/CM001515.1	AJSF01	1	4356	4113	4/30/12	5/18/17	Chromosome	Texas A&M University	SAMN02471106	GCA_000263135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/135/GCA_000263135.1_H37RvCO4	20472797	H37RvCO
Staphylococcus aureus subsp. aureus COL	93062	PRJNA238	238	Terrabacteria group	Firmicutes	2.81386	32.7956	chromosome:NC_002951.2/CP000046.1; plasmid pT181:NC_006629.2/CP000045.2	-	2	2927	2779	9/14/01	3/2/17	Complete Genome	TIGR	SAMN02603996	GCA_000012045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/045/GCA_000012045.1_ASM1204v1	15774886	COL
Streptococcus pneumoniae R6M2-PG	1089300	PRJNA73471	73471	Terrabacteria group	Firmicutes	1.98161	39.7	-	AGIC01	78	2158	1966	10/11/11	3/9/17	Contig	Université Laval	SAMN00739875	GCA_000230335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/335/GCA_000230335.2_ASM23033v2	-	R6M2-PG
Helicobacter pylori HLJHP256	1214221	PRJNA171208	171208	Proteobacteria	delta/epsilon subdivisions	1.57641	39	-	ALKA01	14	1547	1399	8/13/12	3/23/17	Scaffold	BGI-shenzhen	SAMN02469501	GCA_000287735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/735/GCA_000287735.1_H_pylori_HLJHP256_v1.0	23105058	HLJHP256
Neisseria meningitidis M13399	935594	PRJNA61075	61075	Proteobacteria	Betaproteobacteria	2.26299	51.4	-	AEQG01	44	2615	2254	3/3/11	3/21/17	Contig	University of Maryland School of Medicine	SAMN02470731	GCA_000191245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/245/GCA_000191245.2_ASM19124v2	21368196	M13399
Streptococcus pyogenes ABC020032523	1439073	PRJNA233141	233141	Terrabacteria group	Firmicutes	1.86047	38.6	-	JJHA01	8	1878	1740	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567490	GCA_000630665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/665/GCA_000630665.1_Stre_pyog_ABC020032523_V1	-	ABC020032523
Leptospira interrogans serovar Valbuzzi str. Duyster	1218582	PRJNA177127	177127	Spirochaetes	Spirochaetia	4.67262	35.1	-	ANNL01	142	4370	3818	3/15/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01801580	GCA_000346935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/935/GCA_000346935.1_gls454013v01	-	Duyster
Bacillus anthracis	1392	PRJNA336484	336484	Terrabacteria group	Firmicutes	5.45958	35.1	-	MVKF01	71	6091	5726	3/13/17	3/15/17	Contig	National Center for Disease Control and Public Health (NCDC) of Georgia	SAMN05511399	GCA_002025415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/415/GCA_002025415.1_ASM202541v1	-	Ba-9108/08-Geo
Shigella flexneri 2003055	1434143	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.44339	50.5	-	AZOV01	302	4929	4245	1/29/14	2/23/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437378	GCA_000565805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/805/GCA_000565805.1_ASM56580v1	-	2003055
Pseudomonas aeruginosa	287	PRJNA320097	320097	Proteobacteria	Gammaproteobacteria	6.40152	66.2	chromosome:NZ_CP015650.1/CP015650.1	-	1	6056	5810	5/2/17	5/6/17	Chromosome	Universidad de los Andes	SAMN04916456	GCA_002117045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/045/GCA_002117045.1_ASM211704v1	-	Pb18
Acinetobacter baumannii	470	PRJNA255268	255268	Proteobacteria	Gammaproteobacteria	3.85582	38.9	-	JPKX01	67	3700	3562	10/1/14	3/16/17	Scaffold	The University of Queensland	SAMN02911795	GCA_000761465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/465/GCA_000761465.1_ASM76146v1	-	T25
Streptococcus agalactiae LMG 15093	1154822	PRJNA86285	86285	Terrabacteria group	Firmicutes	2.1211	35.4	-	ALQZ01	121	2277	2110	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991129	GCA_000288975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/975/GCA_000288975.1_ASM28897v1	-	LMG 15093
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.13516	40.7	-	CEHE01	63	2104	2010	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234077	GCA_000936575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/575/GCA_000936575.1_Velvet_assembly	-	S91R
Pseudomonas syringae pv. syringae	321	PRJNA287460	287460	Proteobacteria	Gammaproteobacteria	5.8998	59.3	-	LIHS01	105	5339	4957	1/25/16	3/27/17	Contig	University of Edinburgh	SAMN03992220	GCA_001535875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/875/GCA_001535875.1_ASM153587v1	27145446	HRI-W 7872
Legionella pneumophila	446	PRJNA280922	280922	Proteobacteria	Gammaproteobacteria	3.60662	38.3	-	LBMR01	51	3296	3148	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03480679	GCA_001582855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/855/GCA_001582855.1_ASM158285v1	26888563	SZ059
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.13864	50.8	-	NQEF01	150	5458	5073	8/11/17	8/15/17	Contig	JCVI	SAMN07450700	GCA_002248465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/465/GCA_002248465.1_ASM224846v1	-	KPPUTH06
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.77406	67	-	MUSU01	138	7405	7006	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001887	GCA_001992565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/565/GCA_001992565.1_ASM199256v1	-	VC7559
Burkholderia pseudomallei	28450	PRJNA244407	244407	Proteobacteria	Betaproteobacteria	7.7498	67.5	-	JPHA01	15	8186	7324	9/23/14	4/10/17	Scaffold	Los Alamos National Laboratory	SAMN02900667	GCA_000757305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/305/GCA_000757305.1_BES	25414490	BES
Chlamydia trachomatis	813	PRJEB2035	203744	PVC group	Chlamydiae	1.04342	41.3	-	CVNI01	10	964	900	4/21/15	3/26/17	Contig	SC	SAMEA1398340	GCA_001317825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/825/GCA_001317825.1_7396_3_11	-	R32100IMS
Bacillus thuringiensis serovar finitimus	29337	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.31963	35.2	-	NFEL01	53	5724	5360	5/17/17	6/16/17	Contig	Huazhong Agricultural University	SAMN05934562	GCA_002147505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/505/GCA_002147505.1_ASM214750v1	-	CTC
Vibrio cholerae O1 str. 95412	1095660	PRJNA76255	76255	Proteobacteria	Gammaproteobacteria	4.03015	47.5	-	APFM01	103	3899	3707	3/22/13	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00989304	GCA_000348105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/105/GCA_000348105.2_ASM34810v2	26980836	95412
Clostridioides difficile CD212	1151305	PRJNA85785	85785	Terrabacteria group	Firmicutes	4.00393	28.3	-	AVIJ01	36	3662	3507	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766607	GCA_000449725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/725/GCA_000449725.2_ASM44972v2	-	CD212
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.85618	32.3	-	MRJV01	95	2015	1554	4/19/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773912	GCA_002100715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/715/GCA_002100715.1_ASM210071v1	28348839	FSC026
Brucella abortus CNGB 752	1198689	PRJNA176529	176529	Proteobacteria	Alphaproteobacteria	3.28491	57.2	-	AQMA01	3	3376	3152	4/16/13	3/23/17	Contig	Broad Institute	SAMN01047740	GCA_000366125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/125/GCA_000366125.1_Bruc_abor_CNGB_752_V1	-	CNGB 752
Xanthomonas oryzae pv. oryzae	64187	PRJNA269471	269471	Proteobacteria	Gammaproteobacteria	4.35852	63.9	-	JXGP01	409	4325	3491	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252564	GCA_001928915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/915/GCA_001928915.1_ASM192891v1	-	IXO620
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.98269	37.9	-	MLMZ01	350	2095	1807	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297065	GCA_001868545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/545/GCA_001868545.1_ASM186854v1	27118061	AWRIB402
Vibrio parahaemolyticus S161	1394694	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.06166	45.3	-	AWHS01	480	4791	4594	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02339008	GCA_000489255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/255/GCA_000489255.1_S161	-	S161
Bacillus subtilis	1423	PRJNA254928	254928	Terrabacteria group	Firmicutes	4.03096	43.7	-	JWHP01	12	4141	4000	9/22/16	3/28/17	Contig	National Institutes for Food and Drug Control	SAMN02903556	GCA_001742365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/365/GCA_001742365.1_ASM174236v1	26383601	KM
Staphylococcus aureus	1280	PRJNA326817	326817	Terrabacteria group	Firmicutes	2.76496	32.7943	chromosome:NZ_CP016398.1/CP016398.1; plasmid unnamed1:NZ_CP016399.1/CP016399.1	-	2	2839	2678	7/5/17	7/7/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN05292960	GCA_002214665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/665/GCA_002214665.1_ASM221466v1	-	FORC_040
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.8914	28	-	LFOT01	55	3747	3588	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779948	GCA_001573385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/385/GCA_001573385.1_ASM157338v1	26939550	KF Meyer 126
Enterococcus faecalis EnGen0106	1157342	PRJNA88183	88183	Terrabacteria group	Firmicutes	3.27642	37.2	-	AIPV01	22	3448	3275	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808868	GCA_000391025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/025/GCA_000391025.1_Ente_faec_B1441_V1	-	B1441
Streptococcus mutans 11A1	857155	PRJNA49753	49753	Terrabacteria group	Firmicutes	1.92165	36.9	-	AHRO01	111	1919	1831	2/11/13	3/23/17	Contig	Cornell University	SAMN02429037	GCA_000339695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/695/GCA_000339695.1_ASM33969v1	23228887	11A1
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14683	52.4	-	CQMN01	73	2498	2189	3/23/15	4/11/17	Contig	SC	SAMEA1690472	GCA_001116305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/305/GCA_001116305.1_8727_8_28	-	GCGS124
Enterococcus faecium EnGen0027	1138904	PRJNA82459	82459	Terrabacteria group	Firmicutes	2.57621	38.6	-	AHXF01	5	2517	2289	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779817	GCA_000321925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/925/GCA_000321925.1_Ente_faec_E1620_V1	-	E1620
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.20305	65.7	-	JVCV01	126	4866	4682	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197741	GCA_001071335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/335/GCA_001071335.1_ASM107133v1	26230489	543_SMAL
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.17435	41.2	-	CVYE01	83	2131	1951	6/23/15	3/26/17	Contig	SC	SAMEA1032889	GCA_001177205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/205/GCA_001177205.1_6817_2_94	-	EQUI0047
Pasteurella multocida subsp. septica	115545	PRJNA355236	355236	Proteobacteria	Gammaproteobacteria	2.27844	40.2	-	MTIL01	19	2176	2085	3/8/17	3/11/17	Scaffold	INRA	SAMN06140951	GCA_002024085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/085/GCA_002024085.1_ASM202408v1	-	CIRMBP-0927
Lactobacillus rhamnosus MTCC 5462	947828	PRJNA62113	62113	Terrabacteria group	Firmicutes	2.52451	46.9	-	AEYM01	2543	3272	3255	4/7/11	1/8/14	Contig	"SMC College of Dairy Science, Anand Agricultural University, Anand"	SAMN02470978	GCA_000195375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/375/GCA_000195375.2_ASM19537v2	22328760	MTCC 5462
Brucella melitensis	29459	PRJEB7499	276250	Proteobacteria	Alphaproteobacteria	3.29005	57.2	-	CDGE01	28	3377	3022	2/24/15	4/3/17	Contig	Tropical Infectious Diseases Research and Education Centre	SAMEA2813925	GCA_000940435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/435/GCA_000940435.1_Brucella_melitensis_MY1483_09	-	-
Staphylococcus aureus subsp. aureus CN1	1193576	PRJNA162343	162343	Terrabacteria group	Firmicutes	2.75707	32.7942	chromosome:NC_022226.1/CP003979.1; plasmid unnamed:NC_022227.1/CP003980.1; plasmid unnamed2:NC_022228.1/CP003981.1	-	3	2853	2684	8/30/13	3/2/17	Complete Genome	Integrated Genomics	SAMN02603420	GCA_000463055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/055/GCA_000463055.1_ASM46305v1	23977354	CN1
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.38932	53.4	-	LSXF01	33	2330	2148	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496995	GCA_002202905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/905/GCA_002202905.1_S91	-	4425
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.50947	46.9	-	CWIT01	103	4241	3995	7/6/15	3/26/17	Scaffold	SC	SAMEA980201	GCA_001182205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/205/GCA_001182205.1_5116_3_1	-	H582/87
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.47264	59	-	JUXF01	239	5261	5074	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197887	GCA_001065935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/935/GCA_001065935.1_ASM106593v1	26230489	684_SMAR
Lactobacillus plantarum	1590	PRJNA313917	313917	Terrabacteria group	Firmicutes	3.3102	44.4	-	LUWI01	42	3194	3058	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04525974	GCA_001639565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/565/GCA_001639565.1_ASM163956v1	-	Nizo2260
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69758	31.4	-	CUUB01	17	1776	1670	3/31/15	3/18/17	Contig	SC	SAMEA1401680	GCA_001235345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/345/GCA_001235345.1_7213_3_44	-	OXC6587
Burkholderia sp. JS23	1770053	PRJEB15281	341631	Proteobacteria	Betaproteobacteria	5.36358	66.2	-	FNLO01	32	4586	4431	10/21/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216551	GCA_900095735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/735/GCA_900095735.1_IMG-taxon_2651870115_annotated_assembly	-	JS23
Propionibacterium acnes JCM 18918	1302243	PRJDB917	235277	Terrabacteria group	Actinobacteria	2.53656	59.9	-	BAVO01	48	4159	4111	1/15/14	9/15/15	Contig	The University of Tokyo	SAMD00016614	GCA_000521425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/425/GCA_000521425.1_ASM52142v1	-	JCM 18918
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.49297	32.6	-	CUFN01	84	2479	2347	3/31/15	3/26/17	Scaffold	SC	SAMEA1035071	GCA_001227385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/385/GCA_001227385.1_7068_7_20	-	T_480
Enterobacter cloacae	550	PRJNA369194	369194	Proteobacteria	Gammaproteobacteria	5.45571	54.7	-	MUDE01	137	5546	5189	5/22/17	5/24/17	Contig	FAMERP	SAMN06279419	GCA_002154845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/845/GCA_002154845.1_ASM215484v1	-	SJRP/Ec2
Cronobacter sakazakii	28141	PRJNA247781	247781	Proteobacteria	Gammaproteobacteria	4.75979	56.5	-	JNBL01	59	4639	4435	1/25/17	4/6/17	Scaffold	"Nottingham Trent University, UK"	SAMN02780981	GCA_001971205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/205/GCA_001971205.1_ASM197120v1	-	558
Mycobacterium abscessus	36809	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.08564	64.1	-	NEGS01	43	5141	4988	5/16/17	5/24/17	Contig	University of Michigan Medical School	SAMN06806045	GCA_002142835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/835/GCA_002142835.1_ASM214283v1	-	FLAC050
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.49088	67.3	-	LPDC01	73	6806	6505	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449421	GCA_001528645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/645/GCA_001528645.1_ASM152864v1	-	MSMB1064WGS
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.21031	38.8	-	NGGG01	255	4124	3929	5/16/17	5/23/17	Contig	JCVI	SAMN06892253	GCA_002143025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/025/GCA_002143025.1_ASM214302v1	-	ARLG1771
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.16676	54.9	-	LDCB01	104	5048	4820	5/21/15	3/26/17	Contig	JCVI	SAMN03495964	GCA_001011725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/725/GCA_001011725.1_ASM101172v1	-	GN02001
Klebsiella aerogenes	548	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.18103	55.1	-	JVVU01	79	5036	4826	7/10/15	4/6/17	Scaffold	University of Washington	SAMN03197248	GCA_001054275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/275/GCA_001054275.1_ASM105427v1	26230489	1278_EAER
Pseudomonas sp. GM30	1144328	PRJNA83079	83079	Proteobacteria	Gammaproteobacteria	6.15244	60.3	-	AKJP02	32	5633	5492	7/27/12	4/9/17	Contig	Oak Ridge National Lab	SAMN00839637	GCA_000282275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/275/GCA_000282275.2_Pseudomonas.strGM30_v2.0	23045501	GM30
Streptomyces sp. DSM 15324	1739111	PRJNA299231	299231	Terrabacteria group	Actinobacteria	9.37904	71.8	-	LMXA01	52	8259	7671	1/13/16	3/12/17	Scaffold	Bielefeld University	SAMN04193352	GCA_001514285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/285/GCA_001514285.1_ASM151428v1	-	DSM 15324
Bacillus sp. FJAT-21955	1581034	PRJNA294853	294853	Terrabacteria group	Firmicutes	3.79386	41.2	-	LJJA01	37	3932	3797	10/30/15	4/11/17	Contig	Fujian Academy of Agricultural Sciences	SAMN04038046	GCA_001420655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/655/GCA_001420655.1_ASM142065v1	-	FJAT-21955
Acinetobacter sp. 25977_6	1310910	PRJNA194987	194987	Proteobacteria	Gammaproteobacteria	4.0583	38.7	-	JFVL01	121	4136	3736	3/11/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02570340	GCA_000589235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/235/GCA_000589235.1_ASM58923v1	-	25977_6
Clostridium sp. CAG:524	1262817	PRJEB918	206716	Terrabacteria group	Firmicutes	1.28082	25.5	-	CBCE01	35	1298	1265	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138615	GCA_000434555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/555/GCA_000434555.1_MGS524	-	-
Sphingomonas sp. 28-62-20	1970433	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	4.05222	62.2	-	NCGH01	86	4006	3906	8/16/17	8/16/17	Contig	None	SAMN06622299	GCA_002281505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/505/GCA_002281505.1_ASM228150v1	-	-
Rhodococcus sp. 14-2496-1d	2023146	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.91786	64.8	-	NPFV01	55	5683	5510	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07414573	GCA_002259365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/365/GCA_002259365.1_ASM225936v1	-	14-2496-1d
Enterobacter sp. IF2SW-P2	1841144	PRJNA319366	319366	Proteobacteria	Gammaproteobacteria	4.97433	55.9	-	MJAB01	205	4840	4620	9/24/16	4/13/17	Contig	"Jet Propulsion Laboratory, California Institute of Technology"	SAMN04902366	GCA_001743385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/743/385/GCA_001743385.1_ASM174338v1	-	IF2SW-P2
Staphylococcus sp. HMSC062D12	1715064	PRJNA296192	296192	Terrabacteria group	Firmicutes	2.57382	33.8	-	LTQD01	49	2441	2369	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498591	GCA_001836885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/885/GCA_001836885.1_ASM183688v1	-	HMSC062D12
Corynebacterium sp. NML120713	1906332	PRJNA344575	344575	Terrabacteria group	Actinobacteria	2.44506	60.7	-	MLCR01	30	2319	2194	11/10/16	4/14/17	Contig	Public Health Agency of Canada	SAMN05859798	GCA_001875735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/735/GCA_001875735.1_ASM187573v1	-	NML120713
Streptococcus sp. AS20	936578	PRJNA165935	165935	Terrabacteria group	Firmicutes	1.85524	37.9	-	JANS01	17	1841	1715	1/28/14	4/17/17	Contig	JCVI	SAMN02641574	GCA_000524255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/255/GCA_000524255.1_SspAS20v1.0	-	AS20
Mycobacterium sp. 852002-10318_SCH4845932	1834084	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.22322	67.8	-	LZHS01	48	5006	4870	6/17/16	4/12/17	Contig	JCVI	SAMN04696136	GCA_001667535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/535/GCA_001667535.1_ASM166753v1	-	852002-10318_SCH4845932
Paenibacillus sp. yr247	1761880	PRJEB16231	348979	Terrabacteria group	Firmicutes	6.25276	44.4	-	FNIF01	81	6097	5661	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487897	GCA_900103825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/825/GCA_900103825.1_IMG-taxon_2615840634_annotated_assembly	-	YR247
Prochlorococcus sp. scB243_498B23	1471489	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.23661	31.1	-	JFMN01	314	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671360	GCA_000635595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/595/GCA_000635595.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Rhizobium sp. JGI 0001011-C22	1298874	PRJNA190850	190850	Proteobacteria	Alphaproteobacteria	0.385581	58.8	-	AXWD01	38	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440761	GCA_000484815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/815/GCA_000484815.1_ASM48481v1	-	JGI 0001011-C22
Rhizobium sp. JGI 0001005-L20	1298873	PRJNA190849	190849	Proteobacteria	Alphaproteobacteria	0.662116	58.9	-	AXWE01	127	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440762	GCA_000484835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/835/GCA_000484835.1_ASM48483v1	-	JGI 0001005-L20
Prochlorococcus sp. scB243_498F21	1471491	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.39881	31.1	-	JFMP01	420	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671362	GCA_000635615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/615/GCA_000635615.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Paenibacillus sp. PDC88	1884375	PRJEB16574	349886	Terrabacteria group	Firmicutes	6.02877	45.5	-	FNNT01	35	5686	5492	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05518848	GCA_900106725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/725/GCA_900106725.1_IMG-taxon_2693429827_annotated_assembly	-	PDC88
Mycobacterium sp. E2733	1834138	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.70864	67.4	-	LZJZ01	141	5281	5029	6/17/16	4/12/17	Contig	JCVI	SAMN04634216	GCA_001667585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/585/GCA_001667585.1_ASM166758v1	-	E2733
Streptococcus sp. BS21	1161414	PRJNA165937	165937	Terrabacteria group	Firmicutes	1.85912	41.3	-	JANT01	24	1849	1740	1/28/14	4/9/17	Contig	JCVI	SAMN02641575	GCA_000524275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/275/GCA_000524275.1_SspBS21v1.0	-	BS21
Corynebacterium sp. CNJ-954	1904962	PRJNA344658	344658	Terrabacteria group	Actinobacteria	3.77468	65.2	-	MKKI01	46	3594	3254	1/11/17	4/16/17	Contig	"Scripps Institution of Oceanography, UCSD"	SAMN05830217	GCA_001942345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/345/GCA_001942345.1_ASM194234v1	27902408	CNJ-954
Staphylococcus sp. HMSC062E08	1715023	PRJNA296150	296150	Terrabacteria group	Firmicutes	2.56854	33.7	-	LTQC01	39	2450	2370	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498494	GCA_001836895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/895/GCA_001836895.1_ASM183689v1	-	HMSC062E08
Enterobacter sp. Sa187	1914861	PRJNA352128	352128	Proteobacteria	Gammaproteobacteria	4.39889	56	-	MORB01	13	4192	4024	12/4/16	4/16/17	Contig	King Abdullah University of Science and Technology (KAUST)	SAMN05967246	GCA_001888805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/805/GCA_001888805.1_ASM188880v1	-	Sa187
Rhodococcus sp. 14-2483-1-2	2023147	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.86511	64.6	-	NPFW01	27	5464	5295	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07414572	GCA_002259405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/405/GCA_002259405.1_ASM225940v1	-	14-2483-1-2
Sphingomonas sp. SCN 67-18	1660141	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	3.22061	66.8	-	MEFG01	79	3082	2952	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652482	GCA_001724715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/724/715/GCA_001724715.1_ASM172471v1	26031303	-
Clostridium sp. CAG:510	1262816	PRJEB911	206946	Terrabacteria group	Firmicutes	2.76714	46.1	-	CBCI01	66	2576	2542	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138618	GCA_000434615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/615/GCA_000434615.1_MGS510	-	-
Acinetobacter sp. 25977_7	1310911	PRJNA194988	194988	Proteobacteria	Gammaproteobacteria	4.0448	38.8	-	JFVK01	189	4058	3690	3/11/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02570341	GCA_000589255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/255/GCA_000589255.1_ASM58925v1	-	25977_7
Bacillus sp. Leaf406	1736368	PRJNA297956	297956	Terrabacteria group	Firmicutes	4.30168	48.2	-	LMRU01	12	4425	4281	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151758	GCA_001426105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/105/GCA_001426105.1_Leaf406	26633631	Leaf406
Streptomyces sp. RV15	909626	PRJNA299236	299236	Terrabacteria group	Actinobacteria	10.7738	70.2	-	LMXB01	152	10012	8921	1/13/16	3/12/17	Scaffold	Bielefeld University	SAMN04193357	GCA_001514305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/305/GCA_001514305.1_ASM151430v1	-	RV15
Pseudomonas sp. GM33	1144329	PRJNA83081	83081	Proteobacteria	Gammaproteobacteria	6.72722	60.1	-	AKJO01	205	6131	5945	7/27/12	5/24/17	Contig	Oak Ridge National Lab	SAMN00839638	GCA_000282295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/295/GCA_000282295.1_Pseudomonas.strGM33_v1.0	23045501	GM33
Klebsiella aerogenes	548	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.16865	55	-	JVSF01	79	5107	4839	7/10/15	4/6/17	Scaffold	University of Washington	SAMN03197341	GCA_001054405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/405/GCA_001054405.1_ASM105440v1	26230489	151_EAER
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.69826	55.5	-	LDCC01	92	4603	4379	5/21/15	3/26/17	Contig	JCVI	SAMN03495965	GCA_001011775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/775/GCA_001011775.1_ASM101177v1	-	GN02032
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.08285	38.8	-	NGGI01	94	3991	3789	5/16/17	5/23/17	Contig	JCVI	SAMN06892250	GCA_002143135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/135/GCA_002143135.1_ASM214313v1	-	ARLG1779
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.57124	67.3	-	LPCY01	81	6864	6560	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449417	GCA_001528655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/655/GCA_001528655.1_ASM152865v1	-	MSMB1059WGS
Mycobacterium abscessus	36809	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.24806	64.1	-	NEGU01	2	5288	5154	5/16/17	5/24/17	Contig	University of Michigan Medical School	SAMN06806043	GCA_002142845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/845/GCA_002142845.1_ASM214284v1	-	FLAC015
Cronobacter sakazakii	28141	PRJNA248269	248269	Proteobacteria	Gammaproteobacteria	4.51655	56.7	-	JNDD01	118	4362	3454	1/25/17	8/14/17	Scaffold	"Nottingham Trent University, UK"	SAMN02796163	GCA_001971315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/315/GCA_001971315.1_ASM197131v1	-	1240
Enterobacter cloacae	550	PRJNA369193	369193	Proteobacteria	Gammaproteobacteria	5.34029	55.2	-	MUDF01	86	5299	5021	5/22/17	5/24/17	Contig	FAMERP	SAMN06279418	GCA_002154865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/865/GCA_002154865.1_ASM215486v1	-	SJRP/Ec9
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.44849	32.7	-	CUCI01	77	2416	2302	3/31/15	3/26/17	Scaffold	SC	SAMEA1035046	GCA_001227585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/585/GCA_001227585.1_7067_4_25	-	25-12
Propionibacterium acnes JCM 18920	1302244	PRJDB918	235278	Terrabacteria group	Actinobacteria	2.47689	60	-	BAVP01	19	3387	3343	1/15/14	9/15/15	Contig	The University of Tokyo	SAMD00008812	GCA_000521445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/445/GCA_000521445.1_ASM52144v1	-	JCM 18920
Burkholderia sp. yr281	1761778	PRJEB15934	348252	Proteobacteria	Betaproteobacteria	10.3062	61.8	-	FNDI01	86	9243	8870	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487926	GCA_900100565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/565/GCA_900100565.1_IMG-taxon_2615840636_annotated_assembly	-	YR281
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66794	31.4	-	CUJQ01	13	1721	1628	3/31/15	3/18/17	Contig	SC	SAMEA1010490	GCA_001235605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/605/GCA_001235605.1_7038_3_58	-	OXC6308
Lactobacillus plantarum	1590	PRJNA313919	313919	Terrabacteria group	Firmicutes	3.21998	44.5	-	LUWJ01	33	3103	2964	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04525975	GCA_001639585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/585/GCA_001639585.1_ASM163958v1	-	Nizo2262
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.11366	59.8	-	JVMN01	75	4840	4729	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197488	GCA_001076625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/625/GCA_001076625.1_ASM107662v1	26230489	294_SMAR
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.44635	46.9	-	CWIX01	169	4225	3931	7/6/15	3/26/17	Scaffold	SC	SAMEA980206	GCA_001182245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/245/GCA_001182245.1_5116_3_6	-	H450/87
Corynebacterium diphtheriae bv. mitis	1806053	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.39432	53.6	-	LSXE01	56	2316	2120	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496999	GCA_002202915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/915/GCA_002202915.1_S90	-	4552
Staphylococcus haemolyticus JCSC1435	279808	PRJNA12508	12508	Terrabacteria group	Firmicutes	2.69786	32.7885	chromosome:NC_007168.1/AP006716.1; plasmid pSHaeA:NC_007169.1/AP006717.1; plasmid pSHaeB:NC_007170.1/AP006718.1; plasmid pSHaeC:NC_007171.1/AP006719.1	-	4	2648	2484	7/1/05	3/22/17	Complete Genome	NITE	SAMD00061066	GCA_000009865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/865/GCA_000009865.1_ASM986v1	16237012	JCSC1435
Brucella melitensis	29459	PRJNA257008	257008	Proteobacteria	Alphaproteobacteria	3.29718	57.2	-	LBFG01	21	3373	3129	5/6/15	4/3/17	Contig	µFORGE	SAMN03418620	GCA_000988815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/815/GCA_000988815.1_BMEL001-SEQ-1-ASM-1	-	Human/CT/US/1995
Lactobacillus rhamnosus CRL1505	1286405	PRJNA207099	207099	Terrabacteria group	Firmicutes	3.41709	46.3	-	ATBI01	218	-	-	6/26/13	1/8/14	Contig	CERELA-CONICET	SAMN02469462	GCA_000414365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/365/GCA_000414365.1_454ScaffoldContigs1505	23950129	CRL1505
Pasteurella multocida	747	PRJEB17254	351416	Proteobacteria	Gammaproteobacteria	2.27	40.3	-	FOWO01	14	2166	2081	10/31/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421675	GCA_900115485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/485/GCA_900115485.1_IMG-taxon_2684623041_annotated_assembly	-	ATCC 51689
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12912	41.2	-	CWAV01	79	2063	1889	6/23/15	3/26/17	Contig	SC	SAMEA1032890	GCA_001177225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/225/GCA_001177225.1_6903_3_48	-	EQUI0097
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.18818	65.7	-	JVCU01	112	4859	4683	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197742	GCA_001071345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/345/GCA_001071345.1_ASM107134v1	26230489	544_SMAL
Enterococcus faecium EnGen0032	1138905	PRJNA82461	82461	Terrabacteria group	Firmicutes	2.61743	38.1	-	AHXG01	6	2651	2471	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779818	GCA_000321945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/945/GCA_000321945.1_Ente_faec_E1622_V1	-	E1622
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14492	52.4	-	CQNY01	73	2509	2191	3/23/15	4/11/17	Contig	SC	SAMEA1690399	GCA_001116825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/825/GCA_001116825.1_8289_2_27	-	GCGS027
Streptococcus mutans 11SSST2	857147	PRJNA49769	49769	Terrabacteria group	Firmicutes	1.96961	36.7	-	AHRP01	105	1947	1846	2/11/13	3/23/17	Contig	Cornell University	SAMN02429084	GCA_000339715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/715/GCA_000339715.1_ASM33971v1	23228887	11SSST2
Enterococcus faecalis EnGen0088	1157343	PRJNA88185	88185	Terrabacteria group	Firmicutes	3.33964	37.2	-	AIPW01	7	3510	3334	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808924	GCA_000391045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/045/GCA_000391045.1_Ente_faec_B1505_V1	-	B1505
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.90926	28	-	LFOR01	55	3752	3547	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779959	GCA_001573395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/395/GCA_001573395.1_ASM157339v1	26939550	Hall 8388A
Staphylococcus haemolyticus	1283	PRJNA306712	306712	Terrabacteria group	Firmicutes	2.56015	32.7831	chromosome:NZ_CP013911.1/CP013911.1; plasmid pSH108:NZ_CP013912.1/CP013912.1	-	2	2497	2346	4/6/16	3/28/17	Complete Genome	National Institute of Agricultural Science	SAMN04361561	GCA_001611955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/955/GCA_001611955.1_ASM161195v1	27313306	S167
Bacillus subtilis	1423	PRJNA316783	316783	Terrabacteria group	Firmicutes	4.1589	43.4	-	LWJX01	291	4357	4079	11/10/16	3/28/17	Contig	CSIR-Institute of Microbial Technology	SAMN04590045	GCA_001876485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/485/GCA_001876485.1_ASM187648v1	-	RE1.1
Vibrio parahaemolyticus S160	1394693	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	4.78402	45.5	-	AWHT01	541	4512	4278	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02339007	GCA_000489275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/275/GCA_000489275.1_S160	-	S160
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.93531	38	-	MLNA01	316	1987	1744	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297066	GCA_001868555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/555/GCA_001868555.1_ASM186855v1	27118061	AWRIB424
Xanthomonas oryzae pv. oryzae	64187	PRJNA269472	269472	Proteobacteria	Gammaproteobacteria	4.34361	63.8	-	JXGQ01	430	4332	3481	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252566	GCA_001928935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/935/GCA_001928935.1_ASM192893v1	-	IXO621
Brucella abortus CNGB 759	1198690	PRJNA176530	176530	Proteobacteria	Alphaproteobacteria	3.28566	57.2	-	AQMB01	3	3377	3154	4/16/13	3/23/17	Contig	Broad Institute	SAMN01047741	GCA_000366145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/145/GCA_000366145.1_Bruc_abor_CNGB_759_V1	-	CNGB 759
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.82835	32.3	-	MRJZ01	98	1934	1559	4/19/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773903	GCA_002100775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/775/GCA_002100775.1_ASM210077v1	28348839	FDC431
Clostridioides difficile 342	1151306	PRJNA85787	85787	Terrabacteria group	Firmicutes	4.04599	28.3	-	AVIK01	133	3751	3565	8/20/13	3/15/17	Contig	Institute for Genome Sciences	SAMN01766512	GCA_000449745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/745/GCA_000449745.1_ASM44974v1	-	342
Vibrio cholerae O1 str. AG-7404	1095645	PRJNA76225	76225	Proteobacteria	Gammaproteobacteria	3.91512	47.5	-	APFN01	95	3753	3588	3/22/13	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00989285	GCA_000348125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/125/GCA_000348125.2_ASM34812v2	-	AG-7404
Bacillus thuringiensis	1428	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.7455	34.7	-	NFEM01	160	7080	6546	5/17/17	6/16/17	Contig	Huazhong Agricultural University	SAMN05934564	GCA_002147535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/535/GCA_002147535.1_ASM214753v1	-	HD5
Chlamydia trachomatis	813	PRJEB2035	203744	PVC group	Chlamydiae	1.06252	41.2	-	CVNQ01	6	995	927	4/22/15	3/27/17	Contig	SC	SAMEA1398260	GCA_001398155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/155/GCA_001398155.1_7501_6_49	-	R26833extract
Burkholderia pseudomallei	28450	PRJNA244421	244421	Proteobacteria	Betaproteobacteria	7.45388	67.9	-	JPHB01	3	7703	7080	9/23/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02902432	GCA_000757325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/325/GCA_000757325.1_BGV	25414490	PFGE_B T6
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	6.8471	67.2	-	MUTW01	93	6442	6131	2/10/17	4/2/17	Contig	University of British Columbia	SAMN05001923	GCA_001992595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/595/GCA_001992595.1_ASM199259v1	-	VC15266
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.80204	50.8	-	NQBF01	92	4945	4666	8/11/17	8/15/17	Contig	JCVI	SAMN07450669	GCA_002248665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/665/GCA_002248665.1_ASM224866v1	-	ECH+14
Legionella pneumophila	446	PRJNA281148	281148	Proteobacteria	Gammaproteobacteria	3.61546	38.2	-	LBMS01	90	3315	3122	3/8/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03483310	GCA_001582865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/865/GCA_001582865.1_ASM158286v1	26888563	SH202
Pseudomonas syringae pv. papulans	83963	PRJNA287460	287460	Proteobacteria	Gammaproteobacteria	6.18056	58.8	-	LIHW01	173	5895	5369	1/25/16	3/27/17	Contig	University of Edinburgh	SAMN03992216	GCA_001535905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/905/GCA_001535905.1_ASM153590v1	27145446	CFBP 1754
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.12805	41.2	-	CEEZ01	89	2049	1954	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233927	GCA_000936615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/615/GCA_000936615.1_Velvet_assembly	-	LS5J
Streptococcus agalactiae LMG 15094	1154823	PRJNA86287	86287	Terrabacteria group	Firmicutes	1.98171	35.2	-	ALRA01	35	2026	1892	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991122	GCA_000288995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/995/GCA_000288995.1_ASM28899v1	-	LMG 15094
Acinetobacter baumannii	470	PRJNA255196	255196	Proteobacteria	Gammaproteobacteria	4.02968	38.9	-	JPLL01	54	3929	3793	11/26/14	3/16/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN02911269	GCA_000787335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/335/GCA_000787335.1_ASM78733v1	-	BJ7
Pseudomonas aeruginosa 39016	798130	PRJNA49667	49667	Proteobacteria	Gammaproteobacteria	6.86606	65.7463	chromosome:NZ_CM001020.1/CM001020.1	AEEX01	1	13110	12649	9/29/10	5/19/17	Chromosome	"Centre for Genomics Research, University of Liverpool"	SAMN02471834	GCA_000148745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/745/GCA_000148745.1_ASM14874v1	21227987	39016
Shigella flexneri Shi06AH130	1434144	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.61557	50.5	-	AZOW01	506	5148	4406	1/29/14	2/23/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437379	GCA_000565825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/825/GCA_000565825.1_ASM56582v1	-	Shi06AH130
Bacillus anthracis	1392	PRJNA336484	336484	Terrabacteria group	Firmicutes	5.46197	35.1	-	MVKJ01	77	6098	5733	3/13/17	3/15/17	Contig	National Center for Disease Control and Public Health (NCDC) of Georgia	SAMN05511254	GCA_002025435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/435/GCA_002025435.1_ASM202543v1	-	Ba-1802/12-Geo
Leptospira interrogans str. 2003000735	1218579	PRJNA177131	177131	Spirochaetes	Spirochaetia	4.89301	35.3	-	ANMX01	223	4540	4087	3/15/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01801596	GCA_000347055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/055/GCA_000347055.1_gls454034v01	-	2003000735
Streptococcus pyogenes ABC020032182	1439070	PRJNA233140	233140	Terrabacteria group	Firmicutes	1.85341	38.6	-	JJHB01	6	1917	1795	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567489	GCA_000630685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/685/GCA_000630685.1_Stre_pyog_ABC020032182_V1	-	ABC020032182
Neisseria meningitidis M0579	935590	PRJNA61067	61067	Proteobacteria	Betaproteobacteria	2.26004	51.4	-	AEQH01	30	2616	2235	3/3/11	3/21/17	Contig	University of Maryland School of Medicine	SAMN02470725	GCA_000191265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/265/GCA_000191265.2_ASM19126v2	21368196	M0579
Helicobacter pylori HLJHP271	1214222	PRJNA171210	171210	Proteobacteria	delta/epsilon subdivisions	1.58823	38.9	-	ALKB01	11	1589	1428	8/13/12	3/23/17	Scaffold	BGI-shenzhen	SAMN02469502	GCA_000287755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/755/GCA_000287755.1_H_pylori_HLJHP271_v1.0	23105058	HLJHP271
Streptococcus pneumoniae 1974M1-LZD	1089299	PRJNA73475	73475	Terrabacteria group	Firmicutes	2.02862	39.6	-	AGID01	115	2254	1996	10/11/11	3/9/17	Contig	Université Laval	SAMN02470530	GCA_000230355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/355/GCA_000230355.2_ASM23035v2	-	1974M1-LZD
Staphylococcus aureus subsp. aureus	46170	PRJNA287576	287576	Terrabacteria group	Firmicutes	2.94564	32.7789	chromosome:NZ_CP012119.1/CP012119.1; plasmid unnamed:NZ_CP012118.1/CP012118.1	-	2	3124	2960	7/21/15	3/4/17	Complete Genome	Uniformed Services University of the Health Sciences	SAMN03787328	GCA_001183705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/705/GCA_001183705.1_ASM118370v1	-	USA300_2014.C01
Mycobacterium tuberculosis PanR0202	1341711	PRJNA206559	206559	Terrabacteria group	Actinobacteria	4.39187	65.5499	chromosome:NZ_CM002022.1/CM002022.1	ATAS01	1	4259	4074	7/3/13	3/8/17	Chromosome	Texas A&M University	SAMN02471085	GCA_000417925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/925/GCA_000417925.1_fedora0202c	"388,499,323,884,993"	PanR0202
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.85861	38	-	FFIV01	12	1868	1735	2/9/16	3/27/17	Scaffold	SC	SAMEA2674712	GCA_900031505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/505/GCA_900031505.1_14412_4_7	-	2842STDY5882035
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.58826	68.8	-	BDOF01	294	5308	5005	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076695	GCA_002089835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/835/GCA_002089835.1_ASM208983v1	28045086	TR-M-4
Bacillus cereus BAG3X2-2	1053184	PRJNA70333	70333	Terrabacteria group	Firmicutes	5.86569	35.1	-	AHDE01	7	6158	5773	8/15/12	6/15/17	Scaffold	Broad Institute	SAMN02596816	GCA_000291455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/455/GCA_000291455.1_Baci_cere_BAG3X2-2_G13194_V1	-	BAG3X2-2
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.61306	31.9	-	JVGH01	70	2592	2465	7/10/15	3/26/17	Contig	University of Washington	SAMN03197651	GCA_001073035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/035/GCA_001073035.1_ASM107303v1	26230489	458_SEPI
Staphylococcus aureus	1280	PRJNA312385	312385	Terrabacteria group	Firmicutes	2.90342	32.7785	chromosome:NZ_CP014407.1/CP014407.1; plasmid pUSA04-1-SUR12:NZ_CP014408.1/CP014408.1	-	2	3061	2895	2/16/17	3/6/17	Complete Genome	University Medical Center Groningen	SAMN04497606	GCA_002000625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/625/GCA_002000625.1_ASM200062v1	28106148	USA300-SUR12
Pseudomonas fluorescens	294	PRJNA264995	264995	Proteobacteria	Gammaproteobacteria	5.9276	60.5	-	JSFM01	52	-	-	10/27/15	10/27/15	Scaffold	Indiana University	SAMN03144970	GCA_001414295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/295/GCA_001414295.1_ATCC948-2	25539726	ATCC 948 substr. 2
Yersinia pestis PY-13	992139	PRJNA64305	64305	Proteobacteria	Gammaproteobacteria	4.73564	47.5	-	AKRY01	563	4656	4284	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141460	GCA_000268465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/465/GCA_000268465.1_ASM26846v1	-	PY-13
Staphylococcus aureus	1280	PRJNA312385	312385	Terrabacteria group	Firmicutes	2.94991	32.7746	chromosome:NZ_CP014409.1/CP014409.1; plasmid pUSA01-1-SUR13:NZ_CP014410.1/CP014410.1; plasmid pUSA04-1-SUR13:NZ_CP014411.1/CP014411.1	-	3	3128	2967	2/16/17	3/6/17	Complete Genome	University Medical Center Groningen	SAMN04497607	GCA_002000645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/645/GCA_002000645.1_ASM200064v1	28106148	USA300-SUR13
Staphylococcus aureus	1280	PRJNA312385	312385	Terrabacteria group	Firmicutes	2.95002	32.7746	chromosome:NZ_CP014412.1/CP014412.1; plasmid pUSA01-1-SUR14:NZ_CP014413.1/CP014413.1; plasmid pUSA04-1-SUR14:NZ_CP014414.1/CP014414.1	-	3	3131	2970	2/16/17	3/6/17	Complete Genome	University Medical Center Groningen	SAMN04497608	GCA_002000665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/665/GCA_002000665.1_ASM200066v1	28106148	USA300-SUR14
Staphylococcus aureus	1280	PRJNA312385	312385	Terrabacteria group	Firmicutes	2.95002	32.7746	chromosome:NZ_CP014420.1/CP014420.1; plasmid pUSA01-1-SUR16:NZ_CP014421.1/CP014421.1; plasmid pUSA04-1-SUR16:NZ_CP014422.1/CP014422.1	-	3	3131	2970	2/16/17	3/6/17	Complete Genome	University Medical Center Groningen	SAMN04497610	GCA_002000705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/705/GCA_002000705.1_ASM200070v1	28106148	USA300-SUR16
Staphylococcus aureus	1280	PRJNA312385	312385	Terrabacteria group	Firmicutes	2.95002	32.7746	chromosome:NZ_CP014423.1/CP014423.1; plasmid pUSA01-1-SUR17:NZ_CP014424.1/CP014424.1; plasmid pUSA04-1-SUR17:NZ_CP014425.1/CP014425.1	-	3	3132	2970	2/16/17	3/6/17	Complete Genome	University Medical Center Groningen	SAMN04497611	GCA_002000725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/725/GCA_002000725.1_ASM200072v1	28106148	USA300-SUR17
Staphylococcus aureus	1280	PRJNA312385	312385	Terrabacteria group	Firmicutes	2.95002	32.7746	chromosome:NZ_CP014426.1/CP014426.1; plasmid pUSA01-1-SUR18:NZ_CP014427.1/CP014427.1; plasmid pUSA04-1-SUR18:NZ_CP014428.1/CP014428.1	-	3	3131	2970	2/16/17	3/9/17	Complete Genome	University Medical Center Groningen	SAMN04497612	GCA_002000745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/745/GCA_002000745.1_ASM200074v1	28106148	USA300-SUR18
Staphylococcus aureus	1280	PRJNA312385	312385	Terrabacteria group	Firmicutes	2.95002	32.7746	chromosome:NZ_CP014429.1/CP014429.1; plasmid pUSA01-1-SUR19:NZ_CP014430.1/CP014430.1; plasmid pUSA04-1-SUR19:NZ_CP014431.1/CP014431.1	-	3	3131	2970	2/16/17	3/6/17	Complete Genome	University Medical Center Groningen	SAMN04497613	GCA_002000765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/765/GCA_002000765.1_ASM200076v1	28106148	USA300-SUR19
Yersinia pestis PY-14	992140	PRJNA64307	64307	Proteobacteria	Gammaproteobacteria	4.58868	47.8	-	AKRZ01	695	4423	4128	6/15/12	3/27/17	Contig	Institute for Genome Sciences	SAMN02141461	GCA_000268485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/485/GCA_000268485.2_ASM26848v2	-	PY-14
Pseudomonas fluorescens NZI7	564422	PRJNA32039	32039	Proteobacteria	Gammaproteobacteria	6.81409	63.2	-	AJXF01	1032	-	-	7/9/12	1/8/14	Contig	The Sainsbury Laboratory	SAMN02471730	GCA_000275905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/905/GCA_000275905.1_ASM27590v1	-	NZI7
Staphylococcus aureus	1280	PRJNA312385	312385	Terrabacteria group	Firmicutes	2.94991	32.7746	chromosome:NZ_CP014435.1/CP014435.1; plasmid pUSA01-1-SUR21:NZ_CP014436.1/CP014436.1; plasmid pUSA04-1-SUR21:NZ_CP014437.1/CP014437.1	-	3	3127	2966	2/16/17	3/6/17	Complete Genome	University Medical Center Groningen	SAMN04497615	GCA_002000805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/805/GCA_002000805.1_ASM200080v1	28106148	USA300-SUR21
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.60773	32	-	JVBT01	90	2595	2464	7/10/15	3/26/17	Contig	University of Washington	SAMN03197769	GCA_001073435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/435/GCA_001073435.1_ASM107343v1	26230489	568_SEPI
Bacillus cereus BAG3X2-1	1053183	PRJNA70331	70331	Terrabacteria group	Firmicutes	5.6796	35.4	-	AHDD01	19	6055	5603	8/15/12	6/15/17	Scaffold	Broad Institute	SAMN02596815	GCA_000291475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/475/GCA_000291475.1_Baci_cere_BAG3X2-1_G13193_V1	-	BAG3X2-1
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.26373	69	-	BDOG01	286	5030	4735	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076696	GCA_002089855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/855/GCA_002089855.1_ASM208985v1	28045086	TR-M-5
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.81547	38	-	FFIW01	12	1832	1700	2/9/16	3/27/17	Scaffold	SC	SAMEA2674716	GCA_900032115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/115/GCA_900032115.1_14412_4_9	-	2842STDY5882037
Mycobacterium tuberculosis PanR0704	1266446	PRJNA181126	181126	Terrabacteria group	Actinobacteria	4.3985	65.5499	chromosome:NZ_CM002048.1/CM002048.1	ANNN01	1	4267	4084	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471068	GCA_000442795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/795/GCA_000442795.1_fedora0704i_IS	23884993	PanR0704
Staphylococcus aureus USA300-ISMMS1	1458279	PRJNA237099	237099	Terrabacteria group	Firmicutes	2.9512	32.7746	chromosome:NZ_CP007176.1/CP007176.1; plasmid pUSA01-ISMMS:NZ_CP007177.1/CP007177.1; plasmid pUSA02-ISMMS:NZ_CP007178.1/CP007178.1	-	3	3122	2954	2/12/14	3/3/17	Complete Genome	Mount Sinai School of Medicine	SAMN03081531	GCA_000568455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/455/GCA_000568455.1_ASM56845v1	25250641	USA300-ISMMS1
Streptococcus pneumoniae GA47502	760839	PRJNA48869	48869	Terrabacteria group	Firmicutes	2.30026	39.7	-	AGNV01	18	2541	2206	10/25/11	3/9/17	Contig	Institute for Genome Sciences	SAMN00792669	GCA_000231965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/965/GCA_000231965.2_ASM23196v2	-	GA47502
Helicobacter pylori HLJHP253	1214223	PRJNA171211	171211	Proteobacteria	delta/epsilon subdivisions	1.5896	38.8	-	ALKC01	11	1582	1431	8/13/12	3/23/17	Scaffold	BGI-shenzhen	SAMN02469499	GCA_000287775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/775/GCA_000287775.1_H_pylori_HLJHP253_v1.0	-	HLJHP253
Neisseria meningitidis ES14902	935586	PRJNA61059	61059	Proteobacteria	Betaproteobacteria	2.19054	51.7	-	AEQI01	47	2564	2218	3/3/11	3/21/17	Contig	University of Maryland School of Medicine	SAMN02470728	GCA_000191285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/285/GCA_000191285.2_ASM19128v2	21368196	ES14902
Streptococcus pyogenes ABC020031290	1439066	PRJNA233138	233138	Terrabacteria group	Firmicutes	1.7902	38.5	-	JJHC01	2	1804	1686	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567487	GCA_000630705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/705/GCA_000630705.1_Stre_pyog_ABC020031290_V1	-	ABC020031290
Leptospira interrogans str. UT126	1049940	PRJNA74129	74129	Spirochaetes	Spirochaetia	4.86291	35.1	-	ANOJ01	239	4492	4006	3/15/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01766539	GCA_000347095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/095/GCA_000347095.1_gls454111v01	-	UT126
Bacillus anthracis	1392	PRJNA336484	336484	Terrabacteria group	Firmicutes	5.46143	35.1	-	MVKI01	82	6097	5732	3/13/17	3/15/17	Contig	National Center for Disease Control and Public Health (NCDC) of Georgia	SAMN05511380	GCA_002025455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/455/GCA_002025455.1_ASM202545v1	-	Ba-8776/92-Geo
Shigella flexneri Shi06GS55	1434145	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.58982	50.4	-	AZOX01	306	5115	4418	1/29/14	2/22/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437380	GCA_000565845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/845/GCA_000565845.1_ASM56584v1	-	Shi06GS55
Pseudomonas aeruginosa PACS2	388272	PRJNA16851	16851	Proteobacteria	Gammaproteobacteria	6.49242	66.3	chromosome:NZ_AAQW01000001.1/AAQW01000001.1	AAQW01	1	6160	6025	6/5/06	5/19/17	Chromosome	University of Washington	SAMN02471994	GCA_000168335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/335/GCA_000168335.1_ASM16833v1	-	PACS2
Acinetobacter baumannii	470	PRJNA263680	263680	Proteobacteria	Gammaproteobacteria	3.9814	39.3	-	JRWO01	19	3807	3669	12/4/14	3/16/17	Scaffold	Macquarie University	SAMN03105183	GCA_000794125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/125/GCA_000794125.1_ASM79412v1	25422040	6870155
Streptococcus agalactiae LMG 15095	1154824	PRJNA86289	86289	Terrabacteria group	Firmicutes	1.98674	35.3	-	ALRB01	33	2044	1903	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991123	GCA_000289015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/015/GCA_000289015.1_ASM28901v1	-	LMG 15095
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.14616	41.3	-	CEDV01	117	2151	2019	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233904	GCA_000936655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/655/GCA_000936655.1_Velvet_assembly	-	LS2N
Pseudomonas syringae pv. syringae	321	PRJNA287460	287460	Proteobacteria	Gammaproteobacteria	6.23965	59.1	-	LIHR01	130	5752	5305	1/25/16	3/27/17	Contig	University of Edinburgh	SAMN03992221	GCA_001535945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/945/GCA_001535945.1_ASM153594v1	27145446	HRI-W 7924
Legionella pneumophila	446	PRJNA281274	281274	Proteobacteria	Gammaproteobacteria	3.59129	38.2	-	LBAL01	66	3306	3132	3/9/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03486848	GCA_001583565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/565/GCA_001583565.1_ASM158356v1	26888563	WX2011029
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.8495	50.6	-	NQBE01	132	5036	4659	8/11/17	8/15/17	Contig	JCVI	SAMN07450670	GCA_002248685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/685/GCA_002248685.1_ASM224868v1	-	ECH+13
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.66238	67	-	MUTY01	122	7239	6868	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001926	GCA_001992615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/615/GCA_001992615.1_ASM199261v1	-	VC7849
Burkholderia pseudomallei MSHR543	1435990	PRJNA231488	231488	Proteobacteria	Betaproteobacteria	7.33889	67.9	-	JPZX01	2	7521	6904	11/10/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02991373	GCA_000774165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/165/GCA_000774165.1_BPI	25676747	MSHR543
Chlamydia trachomatis	813	PRJEB2035	203744	PVC group	Chlamydiae	1.0606	41.2	-	CVNR01	5	995	928	4/22/15	3/27/17	Contig	SC	SAMEA1398303	GCA_001398215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/215/GCA_001398215.1_7501_6_50	-	R32100extract
Bacillus thuringiensis serovar aizawai	1433	PRJNA349211	349211	Terrabacteria group	Firmicutes	7.21429	34.8	-	NFEP01	277	7700	7140	5/17/17	6/16/17	Contig	Huazhong Agricultural University	SAMN05934567	GCA_002147565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/565/GCA_002147565.1_ASM214756v1	-	T07019
Vibrio cholerae O1 str. AG-8040	1095644	PRJNA76223	76223	Proteobacteria	Gammaproteobacteria	3.97719	47.5	-	APFO01	103	3800	3640	3/22/13	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00989299	GCA_000348145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/145/GCA_000348145.2_ASM34814v2	-	AG-8040
Clostridioides difficile 655	1151308	PRJNA85791	85791	Terrabacteria group	Firmicutes	4.08158	28.3	-	AVIL01	207	3802	3636	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766564	GCA_000449765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/765/GCA_000449765.2_ASM44976v2	-	655
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.80413	32.2	-	MRJX01	99	1882	1550	4/19/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773905	GCA_002100785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/785/GCA_002100785.1_ASM210078v1	28348839	FDC433
Brucella abortus CNGB 966	1198691	PRJNA176531	176531	Proteobacteria	Alphaproteobacteria	3.28587	57.2	-	AQMC01	2	3376	3153	4/16/13	3/23/17	Contig	Broad Institute	SAMN01047742	GCA_000366165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/165/GCA_000366165.1_Bruc_abor_CNGB_966_V1	-	CNGB 966
Xanthomonas oryzae pv. oryzae	64187	PRJNA269473	269473	Proteobacteria	Gammaproteobacteria	4.33214	63.9	-	JXGR01	496	4289	3466	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252588	GCA_001928945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/945/GCA_001928945.1_ASM192894v1	-	IXO627
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.89894	37.9	-	MLMX01	296	1978	1703	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297063	GCA_001868575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/575/GCA_001868575.1_ASM186857v1	27118061	AWRIB398
Vibrio parahaemolyticus S159	1394692	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.04167	45.3	-	AWHU01	499	4790	4582	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02339006	GCA_000489295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/295/GCA_000489295.1_S159	-	S159
Bacillus subtilis	1423	PRJNA316783	316783	Terrabacteria group	Firmicutes	4.12281	43.5	-	LWJZ01	90	4317	4078	11/10/16	3/28/17	Contig	CSIR-Institute of Microbial Technology	SAMN04590047	GCA_001876515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/515/GCA_001876515.1_ASM187651v1	-	RE1.4
Staphylococcus aureus	1280	PRJNA312385	312385	Terrabacteria group	Firmicutes	2.94564	32.7745	chromosome:NZ_CP014432.1/CP014432.1; plasmid pUSA01-1-SUR20:NZ_CP014433.1/CP014433.1; plasmid pUSA04-1-SUR20:NZ_CP014434.1/CP014434.1	-	3	3124	2958	2/16/17	3/9/17	Complete Genome	University Medical Center Groningen	SAMN04497614	GCA_002000785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/785/GCA_002000785.1_ASM200078v1	28106148	USA300-SUR20
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.94268	28	-	LFOU01	74	3785	3662	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779949	GCA_001573435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/435/GCA_001573435.1_ASM157343v1	26939550	Prevot 910
Enterococcus faecalis EnGen0120	1157344	PRJNA88187	88187	Terrabacteria group	Firmicutes	3.22636	37.1	-	AIPX01	37	3415	3244	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808935	GCA_000391065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/065/GCA_000391065.1_Ente_faec_B1532_V1	-	B1532
Streptococcus mutans 2VS1	857144	PRJNA49775	49775	Terrabacteria group	Firmicutes	1.97001	36.6	-	AHRS01	98	1956	1871	2/11/13	3/23/17	Contig	Cornell University	SAMN02429071	GCA_000339735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/735/GCA_000339735.1_ASM33973v1	23228887	2VS1
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.10248	52.6	-	CQLR01	65	2469	2139	3/23/15	4/11/17	Contig	SC	SAMEA1690342	GCA_001116885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/885/GCA_001116885.1_8727_8_14	-	GCGS110
Enterococcus faecium EnGen0031	1138906	PRJNA82463	82463	Terrabacteria group	Firmicutes	2.80964	38	-	AHXH01	22	2877	2679	12/17/12	4/10/17	Scaffold	Broad Institute	SAMN00779819	GCA_000321965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/965/GCA_000321965.1_Ente_faec_E1623_V1	-	E1623
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.95143	65.8	-	JUZC01	325	4677	4482	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197838	GCA_001071475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/475/GCA_001071475.1_ASM107147v1	26230489	638_SMAL
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15033	41.2	-	CVYD01	86	2091	1921	6/23/15	3/26/17	Contig	SC	SAMEA1032891	GCA_001177245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/245/GCA_001177245.1_6817_2_93	-	EQUI0046
Staphylococcus aureus	1280	PRJNA312385	312385	Terrabacteria group	Firmicutes	2.94564	32.7745	chromosome:NZ_CP014438.1/CP014438.1; plasmid pUSA01-1-SUR22:NZ_CP014439.1/CP014439.1; plasmid pUSA04-1-SUR22:NZ_CP014440.1/CP014440.1	-	3	3124	2959	2/16/17	3/6/17	Complete Genome	University Medical Center Groningen	SAMN04497616	GCA_002000825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/825/GCA_002000825.1_ASM200082v1	28106148	USA300-SUR22
Lactobacillus rhamnosus 2166	1381116	PRJNA213993	213993	Terrabacteria group	Firmicutes	3.01636	46.6	-	AVFG02	84	3205	2730	9/13/13	3/5/14	Contig	Kingston Uniiversity	SAMN02298796	GCA_000466865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/865/GCA_000466865.2_ASM46686v2	24558254	2166
Brucella melitensis	29459	PRJNA289967	289967	Proteobacteria	Alphaproteobacteria	3.28249	57.3	-	LKAV01	44	3352	2983	9/29/15	4/4/17	Contig	Stavropol Plague Control Reseach Institute	SAMN03860322	GCA_001302495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/495/GCA_001302495.1_ASM130249v1	-	C-570
Staphylococcus aureus	1280	PRJNA312385	312385	Terrabacteria group	Firmicutes	2.94564	32.7745	chromosome:NZ_CP014441.1/CP014441.1; plasmid pUSA01-1-SUR23:NZ_CP014442.1/CP014442.1; plasmid pUSA04-1-SUR23:NZ_CP014443.1/CP014443.1	-	3	3124	2959	2/16/17	3/6/17	Complete Genome	University Medical Center Groningen	SAMN04497617	GCA_002000845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/845/GCA_002000845.1_ASM200084v1	28106148	USA300-SUR23
Corynebacterium diphtheriae bv. mitis	1806053	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.42975	53.6	-	LSXG01	74	2375	2179	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497000	GCA_002202925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/925/GCA_002202925.1_S92	-	4568
Yersinia enterocolitica	630	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	4.6571	47.2	-	CWJB01	96	4455	4195	7/6/15	3/26/17	Scaffold	SC	SAMEA1486299	GCA_001182345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/345/GCA_001182345.1_8016_2_78	-	ST5081
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.21552	59.8	-	FCKG01	16	5010	4846	1/21/16	3/27/17	Scaffold	SC	SAMEA2274027	GCA_001536325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/325/GCA_001536325.1_12082_3_52	-	2880STDY5682955
Lactobacillus plantarum	1590	PRJNA313920	313920	Terrabacteria group	Firmicutes	3.25926	44.5	-	LUWK01	40	3202	3042	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04525976	GCA_001639595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/595/GCA_001639595.1_ASM163959v1	-	Nizo2263
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.76234	31.3	-	CUSJ01	18	1845	1742	3/31/15	3/18/17	Contig	SC	SAMEA1010361	GCA_001236025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/025/GCA_001236025.1_7092_1_90	-	OXC6537
Burkholderia sp. NFACC38-1	1566268	PRJEB17051	351178	Proteobacteria	Betaproteobacteria	8.68661	66.7	-	FOIG01	69	8174	7733	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159335	GCA_900111715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/715/GCA_900111715.1_IMG-taxon_2599185239_annotated_assembly	-	NFACC38-1
Propionibacterium acnes HL201PA1	1271528	PRJNA183891	183891	Terrabacteria group	Actinobacteria	2.56356	60	-	AODA01	52	2287	2241	7/28/14	7/28/14	Contig	"University of California, Los Angeles"	SAMN02943195	GCA_000735065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/065/GCA_000735065.1_PacnesHL201PA1v01	-	HL201PA1
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.33282	32.6	-	CUDV01	34	2309	2145	3/31/15	3/26/17	Scaffold	SC	SAMEA1035070	GCA_001228405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/405/GCA_001228405.1_7067_4_60	-	51-37
Enterobacter cloacae	550	PRJNA369192	369192	Proteobacteria	Gammaproteobacteria	5.17389	54.6	-	MUDC01	92	5175	4883	5/22/17	5/24/17	Contig	FAMERP	SAMN06279417	GCA_002154935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/935/GCA_002154935.1_ASM215493v1	-	SJRP/Ec13
Cronobacter sakazakii	28141	PRJNA248270	248270	Proteobacteria	Gammaproteobacteria	4.45003	56.8	-	JNDG01	134	4253	3274	1/25/17	8/9/17	Scaffold	"Nottingham Trent University, UK"	SAMN02796166	GCA_001971365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/365/GCA_001971365.1_ASM197136v1	-	1231
Mycobacterium abscessus	36809	PRJNA315990	315990	Terrabacteria group	Actinobacteria	4.87167	64.2	-	NEGT01	18	4854	4724	5/16/17	5/24/17	Contig	University of Michigan Medical School	SAMN06806044	GCA_002142855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/855/GCA_002142855.1_ASM214285v1	-	FLAC040
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.48952	67.3	-	LPDD01	81	6801	6494	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449422	GCA_001528765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/765/GCA_001528765.1_ASM152876v1	-	MSMB1065WGS
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.08709	38.8	-	NGGL01	110	4052	3824	5/16/17	5/24/17	Contig	JCVI	SAMN06892246	GCA_002143175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/175/GCA_002143175.1_ASM214317v1	-	ARLG1789
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.6324	55.7	-	LDCF01	38	4423	4265	5/21/15	3/26/17	Contig	JCVI	SAMN03495968	GCA_001011865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/865/GCA_001011865.1_ASM101186v1	-	GN02097
Klebsiella aerogenes	548	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.19485	54.7	-	JUQG01	198	5100	4864	7/10/15	4/6/17	Scaffold	University of Washington	SAMN03198068	GCA_001058645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/645/GCA_001058645.1_ASM105864v1	26230489	86_EAER
Pseudomonas sp. GM41(2012)	1144708	PRJNA83083	83083	Proteobacteria	Gammaproteobacteria	6.68503	59	-	AKJN02	13	6122	5937	7/27/12	4/9/17	Contig	Oak Ridge National Lab	SAMN00839639	GCA_000282315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/315/GCA_000282315.2_Pseudomonas.strGM41_v2.0	23045501	GM41(2012)
Streptomyces sp. CS159	1982762	PRJNA384379	384379	Terrabacteria group	Actinobacteria	8.40644	72.2	-	NEVD01	6	7598	7274	6/9/17	6/12/17	Scaffold	Universidad de Oviedo	SAMN06837585	GCA_002188335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/335/GCA_002188335.1_ASM218833v1	-	CS159
Bacillus sp. Leaf49	1736222	PRJNA297956	297956	Terrabacteria group	Firmicutes	3.93451	41	-	LMRK01	26	4163	3998	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151602	GCA_001426125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/426/125/GCA_001426125.1_Leaf49	26633631	Leaf49
Acinetobacter sp. 25977_8	1310912	PRJNA194989	194989	Proteobacteria	Gammaproteobacteria	4.04575	38.7	-	JFVJ01	151	4100	3701	3/11/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02570342	GCA_000589335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/335/GCA_000589335.1_ASM58933v1	-	25977_8
Clostridium sp. CAG:43	1262805	PRJEB877	206812	Terrabacteria group	Firmicutes	2.61894	48.8	-	CBHG01	153	2301	2273	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138620	GCA_000434655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/655/GCA_000434655.1_MGS43	-	-
Sphingomonas sp. 66-10	1895848	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	5.38568	66.1	-	MKRR01	170	4991	4427	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660508	GCA_001897045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/045/GCA_001897045.1_ASM189704v1	-	-
Rhodococcus sp. 14-2470-1b	2023149	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.9097	64.4	-	NPFY01	73	5533	5341	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07414570	GCA_002259415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/415/GCA_002259415.1_ASM225941v1	-	14-2470-1b
Enterobacter sp. J49	1903627	PRJNA345318	345318	Proteobacteria	Gammaproteobacteria	4.95652	54.4	-	MWPY01	53	4785	4566	5/18/17	5/24/17	Contig	Universidad Nacional de Rio Cuarto	SAMN05771456	GCA_002148625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/625/GCA_002148625.1_ASM214862v1	-	J49
Staphylococcus sp. HMSC062H10	1715137	PRJNA296265	296265	Terrabacteria group	Firmicutes	2.76066	32.7	-	LTQA01	71	2819	2675	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498633	GCA_001836945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/945/GCA_001836945.1_ASM183694v1	-	HMSC062H10
Corynebacterium sp. NBT06-6	2026255	PRJNA396693	396693	Terrabacteria group	Actinobacteria	2.68925	65.1	-	NQMQ01	76	2477	2335	8/28/17	8/30/17	Contig	Shanghai Ocean University	SAMN07460149	GCA_002273005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/005/GCA_002273005.1_ASM227300v1	-	NBT06-6
Streptococcus sp. ACC21	1161413	PRJNA165927	165927	Terrabacteria group	Firmicutes	2.01605	38.5	-	JAQU01	44	1974	1845	1/28/14	4/9/17	Contig	JCVI	SAMN02641572	GCA_000524375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/375/GCA_000524375.1_SspACC21v1.0	-	ACC21
Mycobacterium sp. E2989	1834140	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.27679	68.9	-	LZJX01	139	5010	4814	6/17/16	4/13/17	Contig	JCVI	SAMN04634218	GCA_001667595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/595/GCA_001667595.1_ASM166759v1	-	E2989
Paenibacillus sp. 276b	1566277	PRJEB16642	349930	Terrabacteria group	Firmicutes	7.21277	45.8	-	FNRR01	17	6477	6296	10/22/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159332	GCA_900107875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/875/GCA_900107875.1_IMG-taxon_2603880220_annotated_assembly	-	276b
Prochlorococcus sp. scB243_498G3	1471492	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.05429	31.1	-	JFMQ01	325	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671363	GCA_000635635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/635/GCA_000635635.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Rhizobium sp. JGI 0001012-L22	1286827	PRJNA187219	187219	Proteobacteria	Alphaproteobacteria	0.320319	59.6	-	AXXJ01	42	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440743	GCA_000485115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/115/GCA_000485115.1_ASM48511v1	-	JGI 0001012-L22
Rhizobium sp. JGI 0001012-J08	1279033	PRJNA185345	185345	Proteobacteria	Alphaproteobacteria	0.2047	58.4	-	AXXV01	36	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440748	GCA_000485215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/215/GCA_000485215.1_ASM48521v1	-	JGI 0001012-J08
Prochlorococcus sp. scB243_498M14	1471496	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.949651	30.9	-	JFMU01	163	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671367	GCA_000635655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/655/GCA_000635655.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Paenibacillus sp. 181mfcol5.1	1761873	PRJEB16778	350927	Terrabacteria group	Firmicutes	5.60244	45.5	-	FNYX01	35	4980	4767	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488600	GCA_900109125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/125/GCA_900109125.1_IMG-taxon_2639762524_annotated_assembly	-	181MFCol5.1
Mycobacterium sp. E1715	1856863	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.64098	68.5	-	LZJJ01	575	5580	4932	6/17/16	4/13/17	Contig	JCVI	SAMN05202172	GCA_001667625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/625/GCA_001667625.1_ASM166762v1	-	E1715
Streptococcus sp. ACS2	936576	PRJNA165941	165941	Terrabacteria group	Firmicutes	2.12855	39.9	-	JALT01	48	2016	1921	1/30/14	4/17/17	Contig	JCVI	SAMN02641577	GCA_000525585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/585/GCA_000525585.1_SspACS2v1.0	-	ACS2
Corynebacterium sp. NML93-0607	702959	PRJNA399534	399534	Terrabacteria group	Actinobacteria	2.57125	65.5	-	NSGO01	20	2363	2240	9/4/17	9/6/17	Contig	National Microbiology Laboratory/ Public Health Agency of Canada	SAMN07539808	GCA_002285075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/075/GCA_002285075.1_ASM228507v1	-	NML93-0607
Staphylococcus sp. HMSC063A07	1715076	PRJNA296204	296204	Terrabacteria group	Firmicutes	2.60094	33.7	-	LTPZ01	36	2470	2396	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498602	GCA_001836955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/955/GCA_001836955.1_ASM183695v1	-	HMSC063A07
Enterobacter sp. TUM13743	2004400	PRJDB5806	388075	Proteobacteria	Gammaproteobacteria	4.8519	55.1	-	BDSF01	549	4874	4510	5/27/17	6/12/17	Contig	Toho University	SAMD00080817	GCA_002189085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/085/GCA_002189085.1_ASM218908v1	-	TUM13743
Rhodococcus sp. 14-1411-2a	2023151	PRJNA395383	395383	Terrabacteria group	Actinobacteria	5.60754	64.7	-	NPGA01	27	5288	5147	8/18/17	8/21/17	Scaffold	Oregon State University	SAMN07414568	GCA_002259485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/485/GCA_002259485.1_ASM225948v1	-	14-1411-2a
Sphingomonas sp. 67-36	1895849	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	4.00019	67.4	-	MKSU01	32	3805	3701	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660537	GCA_001897375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/375/GCA_001897375.1_ASM189737v1	-	-
Clostridium sp. CAG:594	1262826	PRJEB950	206849	Terrabacteria group	Firmicutes	1.14438	27.4	-	CBCN01	48	1225	1188	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138629	GCA_000434835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/434/835/GCA_000434835.1_MGS594	-	-
Acinetobacter sp. Ver3	466088	PRJNA240652	240652	Proteobacteria	Gammaproteobacteria	3.3453	38.9	-	JFYL01	209	3273	3038	4/15/14	4/6/17	Contig	INDEAR	SAMN02678190	GCA_000632455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/455/GCA_000632455.1_AcinetoVer3_1.0	-	Ver3
Bacillus sp. TH007	1664037	PRJNA286315	286315	Terrabacteria group	Firmicutes	3.68716	41.4	-	LNDH01	19	3784	3677	11/17/15	4/11/17	Contig	The Ohio State University	SAMN03760075	GCA_001444735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/735/GCA_001444735.1_ASM144473v1	-	TH007
Streptomyces sp. CS057	1982764	PRJNA384364	384364	Terrabacteria group	Actinobacteria	8.35112	71.7	-	NEVF01	2	7142	6920	6/9/17	6/12/17	Scaffold	Universidad de Oviedo	SAMN06835239	GCA_002188345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/345/GCA_002188345.1_ASM218834v1	-	CS057
Pseudomonas sp. GM48	1144330	PRJNA83085	83085	Proteobacteria	Gammaproteobacteria	6.44379	59.3	-	AKJM01	200	5963	5733	7/27/12	5/24/17	Contig	Oak Ridge National Lab	SAMN00839640	GCA_000282335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/335/GCA_000282335.1_Pseudomonas.strGM48_v1.0	23045501	GM48
Klebsiella aerogenes	548	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.24062	54.9	-	JVPH01	1115	5523	4815	7/10/15	4/6/17	Scaffold	University of Washington	SAMN03197417	GCA_001071835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/835/GCA_001071835.1_ASM107183v1	26230489	225_EAER
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.70499	55.1	-	LDCG01	81	4645	4410	5/21/15	3/26/17	Contig	JCVI	SAMN03495969	GCA_001011895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/895/GCA_001011895.1_ASM101189v1	-	GN02108
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.082	38.8	-	NGGQ01	76	3989	3802	5/16/17	5/23/17	Contig	JCVI	SAMN06892240	GCA_002143255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/255/GCA_002143255.1_ASM214325v1	-	ARLG1798
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.49128	67.3	-	LPDE01	73	6799	6498	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449423	GCA_001528785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/785/GCA_001528785.1_ASM152878v1	-	MSMB1066WGS
Mycobacterium abscessus	36809	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.22354	64.2	-	NEGV01	10	5267	5167	5/16/17	5/24/17	Contig	University of Michigan Medical School	SAMN06806042	GCA_002142865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/865/GCA_002142865.1_ASM214286v1	-	FLAC014
Cronobacter sakazakii	28141	PRJNA248272	248272	Proteobacteria	Gammaproteobacteria	4.39971	56.9	-	JNDI01	162	4197	3291	1/25/17	8/14/17	Scaffold	"Nottingham Trent University, UK"	SAMN02796169	GCA_001971375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/375/GCA_001971375.1_ASM197137v1	-	1221
Enterobacter cloacae subsp. cloacae	336306	PRJNA385361	385361	Proteobacteria	Gammaproteobacteria	4.7597	55	-	NFUM01	24	4661	4467	6/14/17	6/19/17	Contig	Macquarie University	SAMN06887690	GCA_002193115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/115/GCA_002193115.1_ASM219311v1	28586403	MN73R
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.85815	32.8	-	CUDD01	231	2869	2627	3/31/15	4/21/17	Scaffold	SC	SAMEA1035073	GCA_001228465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/465/GCA_001228465.1_7067_4_45	-	51-17
Cutibacterium acnes	1747	PRJNA267549	267549	Terrabacteria group	Actinobacteria	4.88617	59.7	-	JVZP01	195	-	-	7/10/15	7/13/16	Scaffold	University of Washington	SAMN03197149	GCA_001062245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/245/GCA_001062245.1_ASM106224v1	26230489	119_PAVI
Burkholderia sp. NFACC33-1	1566269	PRJEB17774	353197	Proteobacteria	Betaproteobacteria	7.96891	66.2	-	FPJF01	98	7438	6954	11/12/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159384	GCA_900119135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/135/GCA_900119135.1_IMG-taxon_2599185355_annotated_assembly	-	NFACC33-1
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70065	31.3	-	CUII01	24	1779	1683	3/31/15	3/18/17	Contig	SC	SAMEA1010312	GCA_001237025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/025/GCA_001237025.1_7038_3_27	-	OXC6276
Lactobacillus plantarum	1590	PRJNA313924	313924	Terrabacteria group	Firmicutes	3.08726	45.3	-	LUWL01	32	2995	2819	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04525977	GCA_001639625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/625/GCA_001639625.1_ASM163962v1	-	Nizo2264
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.16292	59.9	-	FCHO01	18	4954	4791	1/21/16	3/27/17	Scaffold	SC	SAMEA2273934	GCA_001536345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/345/GCA_001536345.1_12082_2_67	-	2880STDY5682861
Yersinia enterocolitica	630	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	4.62794	47.2	-	CWIY01	96	4402	4153	7/6/15	3/26/17	Scaffold	SC	SAMEA1486420	GCA_001182965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/965/GCA_001182965.1_8016_2_76	-	E701
Corynebacterium diphtheriae bv. belfanti	2014537	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.39762	53.6	-	LSXH01	40	2322	2114	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496996	GCA_002202975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/975/GCA_002202975.1_S93	-	4499
Staphylococcus aureus subsp. aureus	46170	PRJNA260675	260675	Terrabacteria group	Firmicutes	2.93497	32.7744	chromosome:NZ_CP009423.1/CP009423.1; plasmid pSUR1A:NZ_CP009424.1/CP009424.1; plasmid pSUR1B:NZ_CP009425.1/CP009425.1	-	3	3117	2949	1/18/17	3/15/17	Complete Genome	"University of Groningen, University Medical Center Groningen"	SAMN06238073	GCA_001956815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/815/GCA_001956815.1_ASM195681v1	-	USA300_SUR1
Brucella melitensis	29459	PRJNA289968	289968	Proteobacteria	Alphaproteobacteria	3.28213	57.2	-	LKAW01	41	3344	3011	9/29/15	4/4/17	Contig	Stavropol Plague Control Reseach Institute	SAMN03860328	GCA_001302545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/545/GCA_001302545.1_ASM130254v1	-	C-571
Lactobacillus rhamnosus DSM 20021 = JCM 1136 = NBRC 3425	1423797	PRJDB639	243217	Terrabacteria group	Firmicutes	2.93484	46.7	-	BALT01	63	-	-	4/1/14	7/24/15	Contig	The University of Tokyo	SAMD00000741	GCA_000615245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/245/GCA_000615245.1_ASM61524v1	-	JCM 1136
Staphylococcus aureus subsp. aureus ED98	681288	PRJNA39547	39547	Terrabacteria group	Firmicutes	2.84754	32.7742	chromosome:NC_013450.1/CP001781.1; plasmid pAVX:NC_013453.1/CP001784.1; plasmid pAVY:NC_013451.1/CP001782.1; plasmid pT181:NC_013452.1/CP001783.1	-	4	2968	2794	10/27/09	3/2/17	Complete Genome	University of Edinburgh	SAMN02604165	GCA_000024585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/585/GCA_000024585.1_ASM2458v1	19884497	ED98
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12775	41.2	-	CWAU01	74	2056	1875	6/24/15	3/26/17	Contig	SC	SAMEA1032892	GCA_001177265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/265/GCA_001177265.1_6903_3_47	-	EQUI0096
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.53319	66.4	-	JVRD01	67	4086	3985	7/10/15	7/20/16	Scaffold	University of Washington	SAMN03197369	GCA_001071655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/655/GCA_001071655.1_ASM107165v1	26230489	179_SMAL
Enterococcus faecium EnGen0025	1138907	PRJNA82465	82465	Terrabacteria group	Firmicutes	2.91033	37.9	-	AHXI01	43	2927	2709	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779820	GCA_000321985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/985/GCA_000321985.1_Ente_faec_E1626_V1	-	E1626
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.09088	52.6	-	CQMP01	78	2457	2125	3/23/15	4/11/17	Contig	SC	SAMEA1677438	GCA_001116905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/905/GCA_001116905.1_8727_5_80	-	GCGS230
Streptococcus mutans NVAB	857140	PRJNA49783	49783	Terrabacteria group	Firmicutes	1.94417	36.8	-	AHRW01	102	1960	1871	2/11/13	3/23/17	Contig	Cornell University	SAMN02428929	GCA_000339755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/755/GCA_000339755.1_ASM33975v1	23228887	NVAB
Enterococcus faecalis EnGen0089	1157345	PRJNA88189	88189	Terrabacteria group	Firmicutes	3.30156	37.2	-	AIPY01	4	3464	3290	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808946	GCA_000391085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/085/GCA_000391085.1_Ente_faec_B1586_V1	-	B1586
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.88017	28	-	LFOV01	42	3754	3607	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779950	GCA_001573455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/455/GCA_001573455.1_ASM157345v1	26939550	Prevot Dewping
Staphylococcus aureus subsp. aureus USA300_TCH1516	451516	PRJNA19489	19489	Terrabacteria group	Firmicutes	2.90308	32.7742	chromosome:NC_010079.1/CP000730.1; plasmid pUSA01-HOU:NC_012417.1/CP001544.1; plasmid pUSA300HOUMR:NC_010063.1/CP000731.1	-	3	3061	2900	11/16/07	3/2/17	Complete Genome	Baylor College of Medicine	SAMN00253845	GCA_000017085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/085/GCA_000017085.1_ASM1708v1	17986343	TCH1516
Bacillus subtilis	1423	PRJNA316783	316783	Terrabacteria group	Firmicutes	4.18608	43.3	-	LWJY01	194	4345	4120	11/10/16	3/28/17	Contig	CSIR-Institute of Microbial Technology	SAMN04590046	GCA_001876645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/645/GCA_001876645.1_ASM187664v1	-	RE1.3
Vibrio parahaemolyticus S158	1394691	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.06256	45.3	-	AWHV01	497	4789	4597	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02339005	GCA_000489315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/315/GCA_000489315.1_S158	-	S158
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.98285	37.9	-	MLNB01	629	2127	1718	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297067	GCA_001868595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/595/GCA_001868595.1_ASM186859v1	27118061	AWRIB430
Xanthomonas oryzae pv. oryzae	64187	PRJNA269474	269474	Proteobacteria	Gammaproteobacteria	4.40772	63.8	-	JXGS01	481	4423	3541	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252567	GCA_001928985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/985/GCA_001928985.1_ASM192898v1	-	IXO630
Brucella abortus NI380	1160166	PRJNA173559	173559	Proteobacteria	Alphaproteobacteria	3.28646	57.2	-	AQMM01	2	3377	3153	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811189	GCA_000366185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/185/GCA_000366185.1_Bruc_abor_NI380_V1	-	NI380
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.85001	32.3	-	MRKB01	100	1968	1553	4/19/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773901	GCA_002100795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/795/GCA_002100795.1_ASM210079v1	28348839	FDC429
Clostridioides difficile 824	1151309	PRJNA85793	85793	Terrabacteria group	Firmicutes	4.18564	28.6	-	AVIM01	122	3925	3728	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766565	GCA_000449785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/785/GCA_000449785.2_ASM44978v2	-	824
Vibrio cholerae O1 str. EC-0009	1095651	PRJNA76237	76237	Proteobacteria	Gammaproteobacteria	4.02827	47.5	-	APFP01	87	3840	3682	3/22/13	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00989307	GCA_000348165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/165/GCA_000348165.2_ASM34816v2	-	EC-0009
Bacillus thuringiensis serovar aizawai	1433	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.81538	34.9	-	NFEO01	213	7256	6699	5/17/17	6/15/17	Contig	Huazhong Agricultural University	SAMN05934566	GCA_002147575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/575/GCA_002147575.1_ASM214757v1	-	T07005
Chlamydia trachomatis	813	PRJEB2214	203957	PVC group	Chlamydiae	1.04398	41.3	-	CSTJ01	15	968	894	3/24/15	3/26/17	Scaffold	SC	SAMEA901486	GCA_001213045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/045/GCA_001213045.1_5082_8_5	-	Swab6
Burkholderia pseudomallei MSHR983	1435989	PRJNA231487	231487	Proteobacteria	Betaproteobacteria	7.42173	67.9	-	JQDI01	2	7651	7019	11/10/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02997413	GCA_000774175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/175/GCA_000774175.1_BPH	25676747	MSHR983
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.13164	66.9	-	MUTZ01	123	6752	6375	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001927	GCA_001992625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/625/GCA_001992625.1_ASM199262v1	-	VC7881
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.00722	50.6	-	NQBJ01	128	5268	4866	8/11/17	8/15/17	Contig	JCVI	SAMN07450665	GCA_002248705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/705/GCA_002248705.1_ASM224870v1	-	ECH+18
Legionella pneumophila	446	PRJNA280919	280919	Proteobacteria	Gammaproteobacteria	3.44274	38.2	-	LAVQ01	32	3130	2973	3/9/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03480644	GCA_001583575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/575/GCA_001583575.1_ASM158357v1	26888563	SZ2012006
Pseudomonas syringae pv. cerasicola	264451	PRJNA287460	287460	Proteobacteria	Gammaproteobacteria	5.73771	58.3	-	LIIG01	338	5623	4754	1/25/16	3/27/17	Contig	University of Edinburgh	SAMN03992190	GCA_001537945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/945/GCA_001537945.1_ASM153794v1	27145446	CFBP 6109
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.15885	41.1	-	CEEI01	155	2186	2032	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233926	GCA_000936675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/675/GCA_000936675.1_Velvet_assembly	-	LS5F
Streptococcus agalactiae BSU442	1154826	PRJNA86301	86301	Terrabacteria group	Firmicutes	2.11562	35.6	-	ALRD01	84	2174	1958	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991118	GCA_000289055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/055/GCA_000289055.1_ASM28905v1	-	BSU442
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	4.06887	39	-	JSCG01	68	3950	3792	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068186	GCA_000804635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/635/GCA_000804635.1_ASM80463v1	25487793	2011BJAB3
Pseudomonas aeruginosa 19BR	1051003	PRJNA70773	70773	Proteobacteria	Gammaproteobacteria	6.74296	66.1	chromosome:NZ_AFXJ01000001.1/AFXJ01000001.1	AFXJ01	1	6445	6270	8/17/11	5/19/17	Chromosome	"IBIS, Universite Laval"	SAMN02471401	GCA_000223945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/223/945/GCA_000223945.2_ASM22394v2	22207740	19BR
Shigella flexneri Shi06SX36	1434146	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.47049	50.4	-	AZOY01	299	4973	4279	1/29/14	2/23/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437381	GCA_000565865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/865/GCA_000565865.1_ASM56586v1	-	Shi06SX36
Bacillus anthracis	1392	PRJEB12289	314383	Terrabacteria group	Firmicutes	5.44014	35.1	-	FBXU01	48	6051	5743	3/5/16	3/28/17	Contig	ANSES	SAMEA3720272	GCA_900011745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/745/GCA_900011745.1_ANSES_94	-	-
Leptospira interrogans str. 2002000632	1218578	PRJNA177130	177130	Spirochaetes	Spirochaetia	4.8969	35.3	-	ANMW01	217	4537	4081	3/15/13	5/18/17	Contig	J. Craig Venter Institute	SAMN01801595	GCA_000347115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/115/GCA_000347115.1_gls454033v01	-	2002000632
Streptococcus pyogenes ABC020030925	1439064	PRJNA233137	233137	Terrabacteria group	Firmicutes	1.73967	38.5	-	JJHD01	3	1757	1652	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567486	GCA_000630725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/725/GCA_000630725.1_Stre_pyog_ABC020030925_V1	-	ABC020030925
Neisseria meningitidis CU385	935597	PRJNA61081	61081	Proteobacteria	Betaproteobacteria	2.25388	51.5	-	AEQJ01	47	2580	2222	3/3/11	3/21/17	Contig	University of Maryland School of Medicine	SAMN02470729	GCA_000191305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/305/GCA_000191305.2_ASM19130v2	21368196	CU385
Helicobacter pylori HLJHP193	1213457	PRJNA171124	171124	Proteobacteria	delta/epsilon subdivisions	1.56933	39	-	ALJI01	10	1555	1390	8/13/12	3/23/17	Scaffold	BGI-shenzhen	SAMN02469498	GCA_000287835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/835/GCA_000287835.1_ASM28783v1	23105058	HLJHP193
Streptococcus pneumoniae 4027-06	760864	PRJNA48921	48921	Terrabacteria group	Firmicutes	2.11627	39.7	-	AGNW01	7	2287	2013	10/25/11	3/9/17	Contig	Institute for Genome Sciences	SAMN00792710	GCA_000231985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/985/GCA_000231985.2_ASM23198v2	-	4027-06
Staphylococcus aureus	1280	PRJNA312385	312385	Terrabacteria group	Firmicutes	2.95398	32.7737	chromosome:NZ_CP014392.1/CP014392.1; plasmid pUSA01-1-SUR9:NZ_CP014393.1/CP014393.1; plasmid pUSA04-2-SUR9:NZ_CP014394.1/CP014394.1; plasmid pUSA05-1-SUR9:NZ_CP014395.1/CP014395.1; plasmid pUSA06-1-SUR9:NZ_CP014396.1/CP014396.1	-	5	3132	2964	2/16/17	3/6/17	Complete Genome	University Medical Center Groningen	SAMN04497603	GCA_002000565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/565/GCA_002000565.1_ASM200056v1	28106148	USA300-SUR9
Mycobacterium tuberculosis PanR0201	1262525	PRJNA182109	182109	Terrabacteria group	Actinobacteria	4.40257	65.4498	chromosome:NZ_CM002049.1/CM002049.1	ANZG01	1	4287	4075	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471069	GCA_000442945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/945/GCA_000442945.1_fedora0201c_IS	23884993	PanR0201
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.83572	38	-	FFHY01	13	1805	1662	2/9/16	3/27/17	Scaffold	SC	SAMEA2674677	GCA_900034905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/905/GCA_900034905.1_14412_3_85	-	2842STDY5882018
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.15595	69.1	-	BDOH01	322	4936	4602	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076697	GCA_002089875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/875/GCA_002089875.1_ASM208987v1	28045086	TR-M-6-4
Bacillus cereus BAG2X1-2	1053180	PRJNA70325	70325	Terrabacteria group	Firmicutes	5.58965	35.3	-	AHDA01	4	6022	5612	8/16/12	6/15/17	Scaffold	Broad Institute	SAMN02596812	GCA_000291495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/495/GCA_000291495.1_Baci_cere_BAG2X1-2_G13195_V1	-	BAG2X1-2
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.5729	31.8	-	JVBC01	201	2545	2431	7/10/15	3/26/17	Contig	University of Washington	SAMN03197786	GCA_001073465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/465/GCA_001073465.1_ASM107346v1	26230489	585_SEPI
Staphylococcus aureus	1280	PRJNA312385	312385	Terrabacteria group	Firmicutes	2.95398	32.7737	chromosome:NZ_CP014397.1/CP014397.1; plasmid pUSA01-1-SUR10:NZ_CP014398.1/CP014398.1; plasmid pUSA04-2-SUR10:NZ_CP014399.1/CP014399.1; plasmid pUSA05-1-SUR10:NZ_CP014400.1/CP014400.1; plasmid pUSA06-1-SUR10:NZ_CP014401.1/CP014401.1	-	5	3132	2964	2/16/17	3/6/17	Complete Genome	University Medical Center Groningen	SAMN04497604	GCA_002000585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/585/GCA_002000585.1_ASM200058v1	28106148	USA300-SUR10
Pseudomonas fluorescens ABAC62	1230466	PRJNA295872	295872	Proteobacteria	Gammaproteobacteria	6.02248	60.2	-	LKBO01	3415	5549	4179	12/15/15	12/15/15	Contig	New Zealand Institute for Plant & Food research	SAMN04092565	GCA_001467205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/205/GCA_001467205.1_ASM146720v1	-	ABAC62
Yersinia pestis PY-16	992142	PRJNA64311	64311	Proteobacteria	Gammaproteobacteria	4.68726	47.5	-	AKSB01	481	4582	4240	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141463	GCA_000268505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/505/GCA_000268505.1_ASM26850v1	-	PY-16
Staphylococcus aureus	1280	PRJNA312385	312385	Terrabacteria group	Firmicutes	2.95398	32.7737	chromosome:NZ_CP014402.1/CP014402.1; plasmid pUSA01-1-SUR11:NZ_CP014403.1/CP014403.1; plasmid pUSA04-2-SUR11:NZ_CP014404.1/CP014404.1; plasmid pUSA05-1-SUR11:NZ_CP014405.1/CP014405.1; plasmid pUSA06-1-SUR11:NZ_CP014406.1/CP014406.1	-	5	3132	2964	2/16/17	3/6/17	Complete Genome	University Medical Center Groningen	SAMN04497605	GCA_002000605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/605/GCA_002000605.1_ASM200060v1	28106148	USA300-SUR11
Staphylococcus aureus	1280	PRJNA298756	298756	Terrabacteria group	Firmicutes	2.76713	32.7725	chromosome:NZ_CP012976.1/CP012976.1; plasmid pST20130942:NZ_CP012977.1/CP012977.1	-	2	2869	2704	4/5/16	3/6/17	Complete Genome	LNCC	SAMN04166544	GCA_001611365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/365/GCA_001611365.1_ASM161136v1	26918656	ST20130942
Staphylococcus aureus	1280	PRJNA298761	298761	Terrabacteria group	Firmicutes	2.7672	32.7725	chromosome:NZ_CP012974.1/CP012974.1; plasmid pST20130943:NZ_CP012975.1/CP012975.1	-	2	2869	2703	4/5/16	3/6/17	Complete Genome	LNCC	SAMN04166545	GCA_001611385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/385/GCA_001611385.1_ASM161138v1	26918656	ST20130943
Staphylococcus aureus	1280	PRJEB12333	310571	Terrabacteria group	Firmicutes	2.85737	32.7703	chromosome 1:NZ_LT009690.1/LT009690.1; plasmid 2:NZ_LT009691.1/LT009691.1	-	2	2974	2808	1/31/16	3/5/17	Complete Genome	UNIVERSITY OF MELBOURNE	SAMEA3733527	GCA_900017775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/775/GCA_900017775.1_NZAK3	-	NZAK3
Staphylococcus aureus	1280	PRJNA284222	284222	Terrabacteria group	Firmicutes	2.74356	32.7693	chromosome:NZ_CP011528.1/CP011528.1; plasmid unnamed:NZ_CP011529.1/CP011529.1	-	2	2864	2664	6/3/15	3/4/17	Complete Genome	University of Zurich	SAMN03699895	GCA_001027045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/045/GCA_001027045.1_ASM102704v1	26139727	RKI4
Staphylococcus aureus subsp. aureus JKD6159	869816	PRJNA50759	50759	Terrabacteria group	Firmicutes	2.83216	32.7678	chromosome:NC_017338.1/CP002114.2; plasmid pSaa6159:NC_017339.1/CP002115.1	-	2	2926	2728	8/6/10	3/2/17	Complete Genome	University of Melbourne	SAMN02604217	GCA_000144955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/144/955/GCA_000144955.1_ASM14495v1	20729356	JKD6159
Yersinia pestis PY-19	992143	PRJNA64313	64313	Proteobacteria	Gammaproteobacteria	4.51088	47.5	-	AKSC01	535	4392	4061	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141464	GCA_000268525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/525/GCA_000268525.1_ASM26852v1	-	PY-19
Pseudomonas fluorescens	294	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	5.17307	60.1	-	DBFN01	131	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455319	GCA_002294345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/345/GCA_002294345.1_ASM229434v1	28894102	-
Staphylococcus aureus subsp. aureus N315	158879	PRJNA264	264	Terrabacteria group	Firmicutes	2.83947	32.7644	chromosome:NC_002745.2/BA000018.3; plasmid pN315:NC_003140.1/AP003139.1	-	2	2939	2776	4/21/01	3/2/17	Complete Genome	Juntendo Univ.	SAMD00061099	GCA_000009645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/645/GCA_000009645.1_ASM964v1	11418146	N315
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.4751	31.9	-	JVAS01	126	2409	2313	7/10/15	3/26/17	Contig	University of Washington	SAMN03197796	GCA_001073515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/515/GCA_001073515.1_ASM107351v1	26230489	597_SEPI
Bacillus cereus BAG2X1-3	1053181	PRJNA70327	70327	Terrabacteria group	Firmicutes	5.25057	35.4	-	AHDB01	9	5672	5211	8/16/12	6/15/17	Scaffold	Broad Institute	SAMN02596813	GCA_000291515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/515/GCA_000291515.1_Baci_cere_BAG2X1-3_G13211_V1	-	BAG2X1-3
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.39847	68.9	-	BDOI01	354	5062	4807	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076689	GCA_002089895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/895/GCA_002089895.1_ASM208989v1	28045086	Tone-12
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.86751	38	-	FFIE01	17	1886	1764	2/9/16	3/27/17	Scaffold	SC	SAMEA2674731	GCA_900034915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/915/GCA_900034915.1_14412_4_17	-	2842STDY5882045
Mycobacterium tuberculosis PanR0802	1262526	PRJNA182111	182111	Terrabacteria group	Actinobacteria	4.40818	65.5498	chromosome:NZ_CM002050.1/CM002050.1	ANZH01	1	4276	4065	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471108	GCA_000442965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/965/GCA_000442965.1_fedora0802c_IS	23884993	PanR0802
Staphylococcus xylosus	1288	PRJNA237847	237847	Terrabacteria group	Firmicutes	2.86696	32.7633	chromosome:NZ_CP007208.1/CP007208.1; plasmid unnamed:NZ_CP007209.1/CP007209.1	-	2	2704	2558	6/13/14	4/2/17	Complete Genome	University of Hong Kong	SAMN02639856	GCA_000706685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/685/GCA_000706685.1_ASM70668v1	25059860	HKUOPL8
Streptococcus pneumoniae 6735-05	760862	PRJNA48917	48917	Terrabacteria group	Firmicutes	2.11849	39.6	-	AGNX01	11	2299	2009	10/25/11	3/8/17	Contig	Institute for Genome Sciences	SAMN00792765	GCA_000232005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/005/GCA_000232005.2_ASM23200v2	-	6735-05
Helicobacter pylori GAM100Ai	1159019	PRJNA89209	89209	Proteobacteria	delta/epsilon subdivisions	1.63304	39.3	-	ANFP01	46	1604	1448	11/5/12	3/27/17	Scaffold	Washington University	SAMN02436927	GCA_000310005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/005/GCA_000310005.2_ASM31000v2	-	GAM100Ai
Neisseria meningitidis 961-5945	935598	PRJNA61083	61083	Proteobacteria	Betaproteobacteria	2.22721	51.7	-	AEQK01	166	2572	2152	3/3/11	3/21/17	Contig	University of Maryland School of Medicine	SAMN02470732	GCA_000191325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/325/GCA_000191325.2_ASM19132v2	21368196	961-5945
Streptococcus pyogenes ABC020029793	1439057	PRJNA233133	233133	Terrabacteria group	Firmicutes	1.82483	38.5	-	JJHE01	3	1845	1740	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567482	GCA_000630745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/745/GCA_000630745.1_Stre_pyog_ABC020029793_V1	-	ABC020029793
Leptospira interrogans str. 2002000631	1218577	PRJNA177129	177129	Spirochaetes	Spirochaetia	4.84794	35.2	-	ANMV01	224	4482	4052	3/15/13	5/18/17	Contig	J. Craig Venter Institute	SAMN01801593	GCA_000347135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/135/GCA_000347135.1_gls454032v01	-	2002000631
Bacillus anthracis	1392	PRJEB12289	314383	Terrabacteria group	Firmicutes	5.24556	35.2	-	FBXS01	63	5841	5545	3/5/16	3/28/17	Contig	ANSES	SAMEA3720267	GCA_900012555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/555/GCA_900012555.1_ANSES_86	-	-
Shigella flexneri 2002103	1434147	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.45068	50.5	-	AZOZ01	295	4935	4260	1/29/14	2/23/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437382	GCA_000565885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/885/GCA_000565885.1_ASM56588v1	-	2002103
Pseudomonas aeruginosa 213BR	1051004	PRJNA70775	70775	Proteobacteria	Gammaproteobacteria	6.71921	66.1	chromosome:NZ_AFXK01000001.1/AFXK01000001.1	AFXK01	1	6420	6255	8/17/11	5/19/17	Chromosome	"IBIS, Universite Laval"	SAMN02471402	GCA_000223965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/223/965/GCA_000223965.2_ASM22396v2	22207740	213BR
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	4.0491	39	-	JSCI01	61	3936	3776	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068191	GCA_000804645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/645/GCA_000804645.1_ASM80464v1	25487793	2011BJAB7
Streptococcus agalactiae BSU178	1154829	PRJNA86315	86315	Terrabacteria group	Firmicutes	2.1925	35.6	-	ALRG01	62	2279	2098	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991137	GCA_000289075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/075/GCA_000289075.1_ASM28907v1	-	BSU178
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	1.99261	41.3	-	CEDS01	129	1968	1826	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233895	GCA_000936695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/695/GCA_000936695.1_Velvet_assembly	-	LS1M
Pseudomonas syringae pv. avii	663959	PRJNA287460	287460	Proteobacteria	Gammaproteobacteria	6.22986	58.6	-	LIIJ01	321	6106	5371	1/25/16	3/27/17	Contig	University of Edinburgh	SAMN03992187	GCA_001538095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/095/GCA_001538095.1_ASM153809v1	27145446	CFBP 3846
Legionella pneumophila	446	PRJNA280913	280913	Proteobacteria	Gammaproteobacteria	3.65627	38.3	-	LAVP01	46	3358	3203	3/9/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03480633	GCA_001583585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/585/GCA_001583585.1_ASM158358v1	26888563	Yu237
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.54038	51	-	NQBR01	165	4785	4315	8/11/17	8/15/17	Contig	JCVI	SAMN07450637	GCA_002248715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/715/GCA_002248715.1_ASM224871v1	-	ECSW+01
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.51297	67	-	MUUB01	84	7104	6739	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001929	GCA_001992655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/655/GCA_001992655.1_ASM199265v1	-	VC8672
Burkholderia pseudomallei MSHR4304	1434196	PRJNA230726	230726	Proteobacteria	Betaproteobacteria	7.22276	68.1	-	JPOA01	2	7394	6820	11/10/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02929137	GCA_000774185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/185/GCA_000774185.1_BCW_13	25676747	MSHR4304
Chlamydia trachomatis	813	PRJEB2214	203957	PVC group	Chlamydiae	1.11682	41.4	-	CSTK01	37	1022	936	3/24/15	3/26/17	Scaffold	SC	SAMEA901487	GCA_001213525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/525/GCA_001213525.1_5082_8_4	-	Swab5
Bacillus thuringiensis serovar aizawai	1433	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.89621	34.8	-	NFEQ01	257	7304	6780	5/17/17	6/16/17	Contig	Huazhong Agricultural University	SAMN05934568	GCA_002147605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/605/GCA_002147605.1_ASM214760v1	-	T07030
Vibrio cholerae O1 str. EC-0012	1095652	PRJNA76239	76239	Proteobacteria	Gammaproteobacteria	4.03192	47.5	-	APFQ01	96	3855	3682	3/22/13	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00991870	GCA_000348185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/185/GCA_000348185.2_ASM34818v2	-	EC-0012
Clostridioides difficile 840	1151310	PRJNA85795	85795	Terrabacteria group	Firmicutes	4.05213	28.3	-	AVIN01	183	3790	3537	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766566	GCA_000449805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/805/GCA_000449805.2_ASM44980v2	-	840
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.8457	32.3	-	MRKH01	98	1968	1555	4/19/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773895	GCA_002100845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/845/GCA_002100845.1_ASM210084v1	28348839	FDC423
Brucella abortus 64/122	1160205	PRJNA173627	173627	Proteobacteria	Alphaproteobacteria	3.27856	57.2	-	AQLK01	4	3365	3153	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811214	GCA_000366285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/285/GCA_000366285.1_Bruc_abor_64_122_V1	-	64/122
Xanthomonas oryzae pv. oryzae	64187	PRJNA269475	269475	Proteobacteria	Gammaproteobacteria	4.27512	63.9	-	JXGT01	404	4277	3430	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252553	GCA_001928995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/928/995/GCA_001928995.1_ASM192899v1	-	IXO639
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.96504	37.9	-	MLND01	234	2049	1814	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297069	GCA_001868625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/625/GCA_001868625.1_ASM186862v1	27118061	AWRIB432
Vibrio parahaemolyticus S157	1394690	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.03799	45.3	-	AWHW01	606	4810	4576	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02339004	GCA_000489335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/335/GCA_000489335.1_S157	-	S157
Bacillus subtilis	1423	PRJDB4745	354574	Terrabacteria group	Firmicutes	4.23463	43.4	-	BDCV01	39	4454	4242	11/22/16	3/28/17	Contig	University of Malaya	SAMD00051050	GCA_001895065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/065/GCA_001895065.1_ASM189506v1	-	UMX-103
Staphylococcus aureus	1280	PRJNA246373	246373	Terrabacteria group	Firmicutes	2.86537	32.7624	chromosome:NZ_CP007672.1/CP007672.1; plasmid pCA12:NZ_CP007673.1/CP007673.1	-	2	3011	2849	10/23/15	3/5/17	Complete Genome	South American MRSA Consortium	SAMN02767090	GCA_001045795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/795/GCA_001045795.2_ASM104579v2	26048971	CA12
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.79134	28	-	LFOW01	34	3640	3497	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779951	GCA_001573465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/465/GCA_001573465.1_ASM157346v1	26939550	Prevot 697B
Enterococcus faecalis EnGen0090	1157346	PRJNA88191	88191	Terrabacteria group	Firmicutes	3.27377	37.1	-	AIPZ01	15	3439	3274	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808957	GCA_000391105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/105/GCA_000391105.1_Ente_faec_B1618_V1	-	B1618
Streptococcus mutans A19	857136	PRJNA49791	49791	Terrabacteria group	Firmicutes	1.98402	36.7	-	AHSA01	108	1964	1874	2/11/13	3/23/17	Contig	Cornell University	SAMN02428930	GCA_000339775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/775/GCA_000339775.1_ASM33977v1	23228887	A19
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14519	52.4	-	CQJH01	75	2506	2184	3/23/15	4/11/17	Contig	SC	SAMEA1690425	GCA_001117025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/025/GCA_001117025.1_8289_2_51	-	GCGS051
Enterococcus faecium EnGen0035	1138908	PRJNA82467	82467	Terrabacteria group	Firmicutes	2.69598	38	-	AHXJ01	22	2721	2498	12/17/12	4/10/17	Scaffold	Broad Institute	SAMN00779821	GCA_000322005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/005/GCA_000322005.1_Ente_faec_E1627_V1	-	E1627
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.45753	66.5	-	JVPM01	38	4039	3922	7/10/15	7/20/16	Scaffold	University of Washington	SAMN03197412	GCA_001071815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/815/GCA_001071815.1_ASM107181v1	26230489	22_SMAL
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.09422	41.4	-	CWAJ01	73	2046	1870	6/24/15	3/26/17	Contig	SC	SAMEA1032893	GCA_001177285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/285/GCA_001177285.1_6903_3_37	-	EQUI0086
Pasteurella multocida	747	PRJNA401216	401216	Proteobacteria	Gammaproteobacteria	2.0471	44	chromosome:CP023304.1	-	1	1201	1169	9/18/17	9/18/17	Chromosome	IVRI	SAMN07599873	GCA_002310255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/255/GCA_002310255.1_ASM231025v1	-	DP1
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.59481	46.5	-	JUIO01	1423	3075	2761	7/1/15	8/18/15	Contig	Wageningen University	SAMN03196660	GCA_001044005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/005/GCA_001044005.1_ASM104400v1	26048937	Lr140
Brucella melitensis	29459	PRJNA289965	289965	Proteobacteria	Alphaproteobacteria	3.28243	57.3	-	LKEC01	42	3344	3075	10/6/15	4/4/17	Contig	Stavropol Plague Control Reseach Institute	SAMN03860321	GCA_001307425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/425/GCA_001307425.1_ASM130742v1	-	C-569
Staphylococcus aureus	1280	PRJNA246386	246386	Terrabacteria group	Firmicutes	2.86428	32.7616	chromosome:NZ_CP007674.1/CP007674.1; plasmid pCA15:NZ_CP007675.1/CP007675.1	-	2	3010	2847	6/8/15	3/4/17	Complete Genome	South American MRSA Consortium	SAMN02767179	GCA_001021895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/021/895/GCA_001021895.1_ASM102189v1	-	CA15
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.31166	53.3	-	LSXJ01	23	2226	2072	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496994	GCA_002202985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/985/GCA_002202985.1_S95	-	4299
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.70617	47	-	CTIZ01	69	4376	4175	3/26/15	3/26/17	Scaffold	SC	SAMEA980164	GCA_001217565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/565/GCA_001217565.1_4976_1_4	-	YE13/02
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.26479	59.9	-	FCLF01	22	4973	4823	1/21/16	3/27/17	Scaffold	SC	SAMEA2274052	GCA_001536365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/365/GCA_001536365.1_12082_3_76	-	2880STDY5682980
Lactobacillus plantarum	1590	PRJNA313929	313929	Terrabacteria group	Firmicutes	3.33914	44.4	-	LUWM01	73	3212	3064	4/28/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04525983	GCA_001639645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/645/GCA_001639645.1_ASM163964v1	-	Nizo2457
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.79767	31	-	CUMG01	41	1867	1750	3/31/15	3/18/17	Contig	SC	SAMEA1010306	GCA_001237165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/165/GCA_001237165.1_7065_7_32	-	OXC6378
Burkholderia sp. NFPP32	1566267	PRJEB17898	353803	Proteobacteria	Betaproteobacteria	7.96812	66.2	-	FPJP01	89	7422	6953	11/17/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159408	GCA_900119325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/325/GCA_900119325.1_IMG-taxon_2599185240_annotated_assembly	-	NFPP32
Cutibacterium acnes	1747	PRJNA292393	292393	Terrabacteria group	Actinobacteria	2.56656	59.9	-	LJAS01	15	2368	2069	9/22/15	11/24/15	Scaffold	Aarhus University	SAMN03975844	GCA_001297145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/145/GCA_001297145.1_ASM129714v1	26543110	PMH5
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.39859	32.7	-	CUDL01	83	2374	2241	3/31/15	3/26/17	Scaffold	SC	SAMEA1035027	GCA_001229125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/125/GCA_001229125.1_7067_4_52	-	51-27
Enterobacter cloacae subsp. cloacae	336306	PRJNA390433	390433	Proteobacteria	Gammaproteobacteria	5.16863	54.8	-	NJDA01	140	5141	4863	6/26/17	6/28/17	Contig	SAHMRI	SAMN07234405	GCA_002208275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/275/GCA_002208275.1_ASM220827v1	-	60830776
Cronobacter sakazakii	28141	PRJNA248267	248267	Proteobacteria	Gammaproteobacteria	4.48828	56.7	-	JNDC01	107	4338	3538	1/25/17	8/14/17	Scaffold	"Nottingham Trent University, UK"	SAMN02796099	GCA_001971405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/405/GCA_001971405.1_ASM197140v1	-	1218
Mycobacterium abscessus	36809	PRJNA315990	315990	Terrabacteria group	Actinobacteria	4.95055	64.2	-	NEGW01	16	4959	4813	5/16/17	5/24/17	Contig	University of Michigan Medical School	SAMN06806041	GCA_002142915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/915/GCA_002142915.1_ASM214291v1	-	FLAC012
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.64364	67.3	-	LPDF01	69	6939	6629	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449424	GCA_001528805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/805/GCA_001528805.1_ASM152880v1	-	MSMB1067WGS
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.99691	38.8	-	NGGH01	123	3916	3719	5/16/17	5/24/17	Contig	JCVI	SAMN06892251	GCA_002143415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/415/GCA_002143415.1_ASM214341v1	-	ARLG1776
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.65798	55.6	-	LEEB01	37	4487	4329	6/9/15	3/26/17	Contig	JCVI	SAMN03732701	GCA_001022335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/335/GCA_001022335.1_ASM102233v1	-	GN02377
Klebsiella aerogenes	548	PRJNA315166	315166	Proteobacteria	Gammaproteobacteria	5.58436	54.8	-	LUTT01	54	5608	5285	6/14/16	4/6/17	Scaffold	National Institutes of Health	SAMN04550333	GCA_001662695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/695/GCA_001662695.1_ASM166269v1	27833588	D3
Pseudomonas sp. GM49	1144331	PRJNA83087	83087	Proteobacteria	Gammaproteobacteria	6.58989	59.6	-	AKJL01	345	6261	5868	7/27/12	5/24/17	Contig	Oak Ridge National Lab	SAMN00839642	GCA_000282355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/355/GCA_000282355.1_Pseudomonas.strGM49_v1.0	23045501	GM49
Streptomyces sp. CS227	1982763	PRJNA384387	384387	Terrabacteria group	Actinobacteria	7.05932	73.4	-	NEVE01	5	6056	5676	6/9/17	6/12/17	Scaffold	Universidad de Oviedo	SAMN06837627	GCA_002188355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/355/GCA_002188355.1_ASM218835v1	-	CS227
Bacillus sp. G1(2015b)	1706732	PRJNA293917	293917	Terrabacteria group	Firmicutes	3.68235	41.5	-	LKIC01	31	3790	3680	12/24/15	4/11/17	Contig	University of Malaya	SAMN03976074	GCA_001482475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/475/GCA_001482475.1_ASM148247v1	-	G1(2015b)
Acinetobacter sp. 1264765	1310824	PRJNA194900	194900	Proteobacteria	Gammaproteobacteria	4.26152	38.9	-	JMNG01	74	4265	3949	5/6/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02649414	GCA_000681815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/815/GCA_000681815.1_ASM68181v1	-	1264765
Clostridium sp. CAG:138	1262775	PRJEB715	206625	Terrabacteria group	Firmicutes	1.97925	49.4	-	CBBZ01	51	1793	1746	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138639	GCA_000435055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/055/GCA_000435055.1_MGS138	-	-
Sphingomonas sp. 67-41	1895850	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	4.99363	67.3	-	MKWJ01	36	4646	4541	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660630	GCA_001899725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/725/GCA_001899725.1_ASM189972v1	-	-
Rhodococcus sp. ACS1	2028570	PRJNA272922	272922	Terrabacteria group	Actinobacteria	10.8914	67	-	NSDZ01	40	10089	9459	9/13/17	9/15/17	Scaffold	University of East Anglia	SAMN07511354	GCA_002300155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/155/GCA_002300155.1_ASM230015v1	-	ACS1
Enterobacter cloacae complex sp. ECNIH6	1971395	PRJNA279652	279652	Proteobacteria	Gammaproteobacteria	4.9013	55	-	NAVE01	75	4845	4572	6/23/17	9/20/17	Contig	NHGRI	SAMN03455972	GCA_002206605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/605/GCA_002206605.1_ASM220660v1	28659317	ECNIH6
Staphylococcus sp. HMSC063A11	1715024	PRJNA296151	296151	Terrabacteria group	Firmicutes	2.3954	32.5	-	LTPY01	91	2343	2212	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498495	GCA_001836975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/975/GCA_001836975.1_ASM183697v1	-	HMSC063A11
Corynebacterium sp. NML 150383	2029400	PRJNA399534	399534	Terrabacteria group	Actinobacteria	2.52754	65.6	-	NSGK01	22	2337	2210	9/4/17	9/6/17	Contig	National Microbiology Laboratory/ Public Health Agency of Canada	SAMN07539812	GCA_002285085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/085/GCA_002285085.1_ASM228508v1	-	NML 150383
Streptococcus sp. CM7	936581	PRJNA165929	165929	Terrabacteria group	Firmicutes	2.05129	38.6	-	JATP01	35	2016	1881	1/31/14	4/17/17	Contig	JCVI	SAMN02641573	GCA_000526035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/035/GCA_000526035.1_SspCM7v1.0	-	CM7
Mycobacterium sp. E342	1834147	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.84255	68	-	LZJM01	340	5547	5191	6/17/16	4/13/17	Contig	JCVI	SAMN04634230	GCA_001667665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/665/GCA_001667665.1_ASM166766v1	-	E342
Paenibacillus sp. cl141a	1761877	PRJEB16831	350968	Terrabacteria group	Firmicutes	6.74203	50.9	-	FNZO01	24	6184	5889	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488688	GCA_900109305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/305/GCA_900109305.1_IMG-taxon_2636416070_annotated_assembly	-	CL141A
Prochlorococcus sp. scB243_498P15	1471499	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.46043	31.5	-	JFMX01	143	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671370	GCA_000635675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/675/GCA_000635675.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Rhizobium sp. JGI 0001002-E20	1268339	PRJNA183573	183573	Proteobacteria	Alphaproteobacteria	1.08503	60.2	-	AXYD01	102	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441420	GCA_000485295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/295/GCA_000485295.1_ASM48529v1	-	JGI 0001002-E20
Rhizobium sp. JGI 0001014-F05	1268336	PRJNA183570	183570	Proteobacteria	Alphaproteobacteria	0.375406	59.7	-	AXYF01	79	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441099	GCA_000485315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/315/GCA_000485315.1_ASM48531v1	-	JGI 0001014-F05
Prochlorococcus sp. scB243_498P3	1471500	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.43225	31.1	-	JFMY01	258	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671371	GCA_000635695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/695/GCA_000635695.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Paenibacillus sp. NFR01	1566279	PRJEB17041	351189	Terrabacteria group	Firmicutes	5.39013	54.9	-	FOIK01	15	4881	4755	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159358	GCA_900111565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/565/GCA_900111565.1_IMG-taxon_2600255286_annotated_assembly	-	NFR01
Mycobacterium sp. E152	1834127	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.83656	67.4	-	LZJU01	225	5439	5167	6/17/16	4/13/17	Contig	JCVI	SAMN04634221	GCA_001667695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/695/GCA_001667695.1_ASM166769v1	-	E152
Prevotella sp. UBA2822	1947118	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.76016	45.5	-	DEGQ01	94	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451172	GCA_002351525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/351/525/GCA_002351525.1_ASM235152v1	28894102	-
Streptococcus sp. SR1	1161416	PRJNA165943	165943	Terrabacteria group	Firmicutes	2.08299	40.9	-	JATR01	29	2112	2001	1/31/14	4/9/17	Contig	JCVI	SAMN02641578	GCA_000526075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/075/GCA_000526075.1_SspSR1v1.0	-	SR1
Corynebacterium sp. NML92-0415	702957	PRJNA399534	399534	Terrabacteria group	Actinobacteria	2.54316	65.6	-	NSGP01	33	2334	2204	9/4/17	9/6/17	Contig	National Microbiology Laboratory/ Public Health Agency of Canada	SAMN07539807	GCA_002285115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/115/GCA_002285115.1_ASM228511v1	-	NML92-0415
Staphylococcus sp. HMSC063D03	1715009	PRJNA296136	296136	Terrabacteria group	Firmicutes	2.55047	33.7	-	LTPW01	30	2417	2335	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498491	GCA_001837025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/025/GCA_001837025.1_ASM183702v1	-	HMSC063D03
Enterobacter sp. 940_PEND	1572665	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.91767	55.5	-	JUMS01	165	4811	4633	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03198160	GCA_001059415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/415/GCA_001059415.1_ASM105941v1	26230489	940_PEND
Rhodococcus sp. ACPA4	2028571	PRJNA272922	272922	Terrabacteria group	Actinobacteria	7.06712	61.6	-	NSDY01	9	6475	6269	9/13/17	9/15/17	Scaffold	University of East Anglia	SAMN07511353	GCA_002300185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/185/GCA_002300185.1_ASM230018v1	-	ACPA4
Sphingomonas sp. 28-62-11	1970432	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.89679	62.5	-	NCGB01	63	2874	2784	8/16/17	8/16/17	Scaffold	None	SAMN06622305	GCA_002278865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/865/GCA_002278865.1_ASM227886v1	-	-
Clostridium sp. CAG:245	1262784	PRJEB783	206676	Terrabacteria group	Firmicutes	1.45695	29.8	-	CBCD01	80	1366	1330	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138645	GCA_000435175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/175/GCA_000435175.1_MGS245	-	-
Acinetobacter sp. 263903-1	1310678	PRJNA194754	194754	Proteobacteria	Gammaproteobacteria	3.25926	41.4	-	JMNM01	72	3144	2901	5/6/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02692953	GCA_000682155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/155/GCA_000682155.1_ASM68215v1	-	263903-1
Bacillus sp. G3(2015)	1706731	PRJNA293916	293916	Terrabacteria group	Firmicutes	5.43365	34.9	-	LKID01	120	5785	5477	12/24/15	4/11/17	Contig	University of Malaya	SAMN03976073	GCA_001482495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/495/GCA_001482495.1_ASM148249v1	-	G3(2015)
Streptomyces sp. CS113	1982761	PRJNA384375	384375	Terrabacteria group	Actinobacteria	8.72809	72.2	-	NEVC01	3	7881	7527	6/9/17	6/12/17	Scaffold	Universidad de Oviedo	SAMN06835261	GCA_002188365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/365/GCA_002188365.1_ASM218836v1	-	CS113
Pseudomonas sp. GM50	1144332	PRJNA83089	83089	Proteobacteria	Gammaproteobacteria	6.69214	59	-	AKJK01	155	6136	5936	7/27/12	5/19/17	Contig	Oak Ridge National Lab	SAMN00839643	GCA_000282375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/375/GCA_000282375.1_Pseudomonas.strGM50_v1.0	23045501	GM50
Klebsiella aerogenes	548	PRJNA312243	312243	Proteobacteria	Gammaproteobacteria	5.82178	54.6	-	LSOH01	57	5927	5592	6/14/16	4/6/17	Scaffold	National Institutes of Health	SAMN04496843	GCA_001662705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/705/GCA_001662705.1_ASM166270v1	27833588	D2
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.86273	55.4	-	LEDZ01	58	4759	4549	6/9/15	4/10/17	Contig	JCVI	SAMN03732703	GCA_001022345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/345/GCA_001022345.1_ASM102234v1	-	GN02413
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.97335	38.7	-	NGGU01	79	3845	3667	5/16/17	5/24/17	Contig	JCVI	SAMN06892235	GCA_002143505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/505/GCA_002143505.1_ASM214350v1	-	ARLG1804
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.32884	67.3	-	LPDH01	122	6649	6303	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449426	GCA_001528825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/825/GCA_001528825.1_ASM152882v1	-	MSMB1070WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.1417	64	-	FVBG01	32	5162	4999	3/10/17	3/18/17	Contig	SC	SAMEA2070829	GCA_900130265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/265/GCA_900130265.1_10071_6_80	-	165
Cronobacter sakazakii	28141	PRJNA248268	248268	Proteobacteria	Gammaproteobacteria	4.33984	57	-	JNDE01	124	4163	3357	1/25/17	8/14/17	Scaffold	"Nottingham Trent University, UK"	SAMN02796102	GCA_001971415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/415/GCA_001971415.1_ASM197141v1	-	1249
Enterobacter cloacae subsp. cloacae	336306	PRJNA390433	390433	Proteobacteria	Gammaproteobacteria	5.46743	54.4	-	NJCZ01	170	5496	5150	6/26/17	6/28/17	Contig	SAHMRI	SAMN07234400	GCA_002208285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/285/GCA_002208285.1_ASM220828v1	-	49530189
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.51134	32.6	-	CUGG01	99	2471	2374	3/31/15	4/21/17	Scaffold	SC	SAMEA1035053	GCA_001229185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/185/GCA_001229185.1_7068_7_38	-	113101
Cutibacterium acnes	1747	PRJNA292394	292394	Terrabacteria group	Actinobacteria	2.56782	59.9	-	LJAT01	13	2372	2074	9/22/15	11/24/15	Scaffold	Aarhus University	SAMN03975845	GCA_001297165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/165/GCA_001297165.1_ASM129716v1	26543110	PMH7
Burkholderia sp. WP40	1416770	PRJEB17963	353831	Proteobacteria	Betaproteobacteria	6.7666	67	-	FPJR01	43	6207	5891	11/17/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02787160	GCA_900119435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/435/GCA_900119435.1_IMG-taxon_2615840645_annotated_assembly	-	WP40
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69251	31.4	-	CUOF01	14	1766	1668	3/31/15	3/18/17	Contig	SC	SAMEA1010404	GCA_001237285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/285/GCA_001237285.1_7065_7_78	-	OXC6426
Lactobacillus plantarum	1590	PRJNA311556	311556	Terrabacteria group	Firmicutes	3.29783	44.4	-	LSND01	61	3248	3060	5/13/16	3/28/17	Contig	Instituto Nacional de Tecnologia Agropecuaria	SAMN04485286	GCA_001643065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/065/GCA_001643065.1_ASM164306v1	-	UC8491
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.10571	60	-	FCJI01	18	4843	4694	1/21/16	3/27/17	Scaffold	SC	SAMEA2273999	GCA_001536385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/385/GCA_001536385.1_12082_3_28	-	2880STDY5682927
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.59046	47	-	CTIN01	37	4281	4089	3/26/15	3/26/17	Scaffold	SC	SAMEA980174	GCA_001217685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/685/GCA_001217685.1_5103_7_4	-	YE41/03
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.44641	53.5	-	LSXN01	50	2355	2182	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497009	GCA_002202995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/995/GCA_002202995.1_S100	-	4800
Staphylococcus aureus subsp. aureus	46170	PRJNA321054	321054	Terrabacteria group	Firmicutes	2.93199	32.7594	chromosome:CP016863.1; plasmid unnamed1:CP016862.1	-	2	3012	2934	8/31/16	8/31/16	Complete Genome	Uniformed Services University	SAMN04964640	GCA_001717725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/725/GCA_001717725.1_ASM171772v1	-	1625.CO1
Brucella melitensis	29459	PRJNA289970	289970	Proteobacteria	Alphaproteobacteria	3.28307	57.3	-	LKED01	41	3348	3065	10/6/15	4/4/17	Contig	Stavropol Plague Control Reseach Institute	SAMN03860330	GCA_001307445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/307/445/GCA_001307445.1_ASM130744v1	-	C-572
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.72403	46.5	-	JUIJ01	921	3053	2844	7/1/15	8/18/15	Contig	Wageningen University	SAMN03196655	GCA_001044085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/085/GCA_001044085.1_ASM104408v1	26048937	Lr053
Pasteurella multocida	747	PRJNA401218	401218	Proteobacteria	Gammaproteobacteria	2.29262	44	chromosome:CP023305.1	-	1	1395	1346	9/18/17	9/18/17	Chromosome	IVRI	SAMN07599877	GCA_002310275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/275/GCA_002310275.1_ASM231027v1	-	375-A/15
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.14435	41.2	-	CWCI01	82	2089	1915	6/24/15	3/26/17	Contig	SC	SAMEA1032894	GCA_001177305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/305/GCA_001177305.1_6903_5_86	-	EQUI0135
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.13856	65.8	-	JVMJ01	321	4837	4631	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197493	GCA_001072155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/155/GCA_001072155.1_ASM107215v1	26230489	30_SMAL
Enterococcus faecium EnGen0039	1138909	PRJNA82469	82469	Terrabacteria group	Firmicutes	2.82212	38.3	-	AHXK01	21	2906	2600	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779823	GCA_000322025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/025/GCA_000322025.1_Ente_faec_E1630_V1	-	E1630
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14827	52.4	-	CQNU01	72	2519	2192	3/23/15	4/11/17	Contig	SC	SAMEA1690323	GCA_001117305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/305/GCA_001117305.1_8289_2_66	-	GCGS066
Streptococcus mutans U138	857135	PRJNA49793	49793	Terrabacteria group	Firmicutes	1.99196	36.7	-	AHSB01	153	1966	1878	2/11/13	3/23/17	Contig	Cornell University	SAMN02429074	GCA_000339795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/795/GCA_000339795.1_ASM33979v1	23228887	U138
Enterococcus faecalis EnGen0109	1157347	PRJNA88193	88193	Terrabacteria group	Firmicutes	3.3224	37.1	-	AIQA01	53	3493	3326	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808968	GCA_000391125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/125/GCA_000391125.1_Ente_faec_B1623_V1	-	B1623
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.81241	27.9	-	LFOX01	65	3631	3493	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779985	GCA_001573485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/485/GCA_001573485.1_ASM157348v1	26939550	Hall 80
Staphylococcus aureus	1280	PRJDB4003	381589	Terrabacteria group	Firmicutes	2.8415	32.753	chromosome:AP014921.1; plasmid pJSA01:AP014922.1	-	2	2742	2664	4/1/17	7/12/17	Complete Genome	"Department of Bacteriology, Hiroshima University Graduate School of Biomedical & Health Sciences"	SAMD00034144	GCA_002356675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/675/GCA_002356675.1_ASM235667v1	-	JH4899
Bacillus subtilis	1423	PRJNA355231	355231	Terrabacteria group	Firmicutes	4.03024	43.8	-	MQSW01	35	4146	3963	2/13/17	2/22/17	Contig	Yerevan State University	SAMN06066714	GCA_001996305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/305/GCA_001996305.1_ASM199630v1	-	AG4
Vibrio parahaemolyticus S156	1394689	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.06058	45.3	-	AWHX01	584	4797	4574	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02339003	GCA_000489355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/355/GCA_000489355.1_S156	-	S156
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.02048	37.9	-	MLNE01	446	2081	1815	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297070	GCA_001868635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/635/GCA_001868635.1_ASM186863v1	27118061	AWRIB433
Xanthomonas oryzae pv. oryzae	64187	PRJNA269477	269477	Proteobacteria	Gammaproteobacteria	4.40649	63.8	-	JXGV01	490	4400	3534	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252584	GCA_001929005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/005/GCA_001929005.1_ASM192900v1	-	IXO645
Brucella abortus 67/781	1160182	PRJNA173583	173583	Proteobacteria	Alphaproteobacteria	3.2862	57.2	-	AQLM01	4	3377	3154	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811238	GCA_000366305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/305/GCA_000366305.1_Bruc_abor_67_781_V1	-	67/781
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.84604	32.3	-	MRKG01	97	1965	1543	4/19/17	8/21/17	Contig	FOI Swedish Defence Research Agency	SAMN03773896	GCA_002100855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/855/GCA_002100855.1_ASM210085v1	28348839	FDC424
Clostridioides difficile 842	1151312	PRJNA85799	85799	Terrabacteria group	Firmicutes	4.00592	28.2	-	AVIO01	162	3755	3509	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766567	GCA_000449825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/825/GCA_000449825.2_ASM44982v2	-	842
Vibrio cholerae O1 str. EC-0027	1095653	PRJNA76241	76241	Proteobacteria	Gammaproteobacteria	4.02767	47.5	-	APFR01	94	3835	3678	3/22/13	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00989314	GCA_000348205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/205/GCA_000348205.2_ASM34820v2	-	EC-0027
Bacillus thuringiensis serovar aizawai	1433	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.15485	35	-	NFER01	175	6673	6221	5/17/17	6/15/17	Contig	Huazhong Agricultural University	SAMN05934569	GCA_002147635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/635/GCA_002147635.1_ASM214763v1	-	T07128
Chlamydia trachomatis	813	PRJEB2035	203744	PVC group	Chlamydiae	1.25943	41	-	CVND01	226	1183	998	4/21/15	3/26/17	Scaffold	SC	SAMEA1008223	GCA_001317705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/705/GCA_001317705.1_7054_3_88	-	LGV1339
Burkholderia pseudomallei MSHR465J	1435987	PRJNA231483	231483	Proteobacteria	Betaproteobacteria	7.13842	68.2	-	JPZW01	2	7341	6764	11/10/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02991370	GCA_000774195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/195/GCA_000774195.1_BPF	25676747	MSHR465J
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.69766	67	-	MUUC01	146	7286	6900	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001930	GCA_001992675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/675/GCA_001992675.1_ASM199267v1	-	VC9160
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.01133	50.9	-	NQBZ01	210	5299	4855	8/11/17	8/15/17	Contig	JCVI	SAMN07450629	GCA_002248745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/745/GCA_002248745.1_ASM224874v1	-	ECSW+10
Legionella pneumophila	446	PRJNA281272	281272	Proteobacteria	Gammaproteobacteria	3.55382	38.3	-	LBHL01	40	3251	3105	3/9/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03486845	GCA_001583595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/595/GCA_001583595.1_ASM158359v1	26888563	Hu6
Pseudomonas syringae pv. broussonetiae	129136	PRJNA287460	287460	Proteobacteria	Gammaproteobacteria	6.10687	57.8	-	LIII01	357	6009	5209	1/25/16	3/27/17	Contig	University of Edinburgh	SAMN03992188	GCA_001538205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/205/GCA_001538205.1_ASM153820v1	27145446	CFBP 5140
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.15858	41.1	-	CEFA01	151	2183	2034	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233910	GCA_000936735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/735/GCA_000936735.1_Velvet_assembly	-	LS3D
Streptococcus agalactiae STIR-CD-21	1154849	PRJNA86357	86357	Terrabacteria group	Firmicutes	2.14569	35.6	-	ALRO01	53	2194	2052	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993777	GCA_000289155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/155/GCA_000289155.1_ASM28915v1	-	STIR-CD-21
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	3.91017	38.9	-	JSCJ01	79	3778	3629	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068194	GCA_000804655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/655/GCA_000804655.1_ASM80465v1	25487793	2004BJAB10
Pseudomonas aeruginosa 2192	350703	PRJNA16171	16171	Proteobacteria	Gammaproteobacteria	6.90512	66	-	AAKW01	1	6563	6109	1/4/06	5/19/17	Scaffold	Broad Institute	SAMN02595211	GCA_000152545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/545/GCA_000152545.1_ASM15254v1	18287045	2192
Shigella flexneri Shi05SX04	1434148	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.46193	50.5	-	AZPA01	300	4931	4249	1/29/14	2/22/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437383	GCA_000565905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/905/GCA_000565905.1_ASM56590v1	-	Shi05SX04
Bacillus anthracis	1392	PRJEB12289	314383	Terrabacteria group	Firmicutes	5.43921	35.1	-	FBXN01	49	6060	5743	3/5/16	3/28/17	Contig	ANSES	SAMEA3720263	GCA_900013465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/465/GCA_900013465.1_ANSES_101	-	-
Leptospira interrogans serovar Pomona str. CSL4002	1240691	PRJNA177158	177158	Spirochaetes	Spirochaetia	4.59134	35	-	ANMZ01	187	4173	3685	3/15/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01801606	GCA_000347155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/155/GCA_000347155.1_gls454197v01	-	CSL4002
Streptococcus pyogenes ABC020029711	1439056	PRJNA233132	233132	Terrabacteria group	Firmicutes	1.8451	38.6	-	JJHF01	2	1878	1758	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567481	GCA_000630765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/765/GCA_000630765.1_Stre_pyog_ABC020029711_V1	-	ABC020029711
Neisseria meningitidis M01-240013	935595	PRJNA61077	61077	Proteobacteria	Betaproteobacteria	2.29839	51.4	-	AEQL01	58	2643	2272	3/3/11	3/21/17	Contig	University of Maryland School of Medicine	SAMN02470735	GCA_000191345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/345/GCA_000191345.2_ASM19134v2	21368196	M01-240013
Helicobacter pylori GAM101Biv	1159020	PRJNA89211	89211	Proteobacteria	delta/epsilon subdivisions	1.61093	39.3	-	APCW01	52	1589	1431	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436925	GCA_000344945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/945/GCA_000344945.2_ASM34494v2	-	GAM101Biv
Streptococcus pneumoniae GA44288	760822	PRJNA48833	48833	Terrabacteria group	Firmicutes	2.06599	39.9	-	AGNY01	13	2256	1952	10/25/11	3/8/17	Contig	Institute for Genome Sciences	SAMN00792792	GCA_000232025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/025/GCA_000232025.2_ASM23202v2	-	GA44288
Staphylococcus aureus subsp. aureus	46170	PRJEB18112	357235	Terrabacteria group	Firmicutes	2.82187	32.7456	chromosome I:NZ_LT671859.1/LT671859.1; plasmid II:NZ_LT671860.1/LT671860.1	-	2	2945	2790	12/14/16	3/6/17	Complete Genome	JUSTUS LIEBIG UNIVERSITAT	SAMEA17757418	GCA_900129335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/129/335/GCA_900129335.1_PP_HGAG_QV30_2SC_T4	-	-
Mycobacterium tuberculosis PanR1005	1262529	PRJNA182112	182112	Terrabacteria group	Actinobacteria	4.40815	65.4994	chromosome:NZ_CM002051.1/CM002051.1	ANZI01	1	4277	4066	8/1/13	3/8/17	Chromosome	Texas A&M University	SAMN02471042	GCA_000443005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/005/GCA_000443005.1_fedora1005_IS	23884993	PanR1005
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.96699	38.3	-	FFIH01	31	2032	1887	2/9/16	3/27/17	Scaffold	SC	SAMEA2674740	GCA_900034925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/925/GCA_900034925.1_14412_4_23	-	2842STDY5882051
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.74191	68.7	-	BDOJ01	295	5489	5149	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076690	GCA_002089915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/915/GCA_002089915.1_ASM208991v1	28045086	Tone-13
Bacillus cereus BAG3O-2	1053182	PRJNA70329	70329	Terrabacteria group	Firmicutes	5.85602	35.1	-	AHDC01	11	6108	5776	8/15/12	5/18/17	Scaffold	Broad Institute	SAMN02596814	GCA_000291535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/535/GCA_000291535.1_Baci_cere_BAG3O-2_G13191_V1	-	BAG3O-2
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.41329	31.9	-	JUXN01	120	2356	2276	7/10/15	3/26/17	Contig	University of Washington	SAMN03197879	GCA_001073875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/875/GCA_001073875.1_ASM107387v1	26230489	677_SEPI
Staphylococcus aureus subsp. aureus USA300_FPR3757	451515	PRJNA16313	16313	Terrabacteria group	Firmicutes	2.91747	32.7392	chromosome:NC_007793.1/CP000255.1; plasmid pUSA01:NC_007790.1/CP000256.1; plasmid pUSA02:NC_007791.1/CP000257.1; plasmid pUSA03:NC_007792.1/CP000258.1	-	4	3063	2917	2/10/06	3/2/17	Complete Genome	"University of California, San Francisco"	SAMN02604150	GCA_000013465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/465/GCA_000013465.1_ASM1346v1	16517273	USA300_FPR3757
Yersinia pestis PY-01	992127	PRJNA64281	64281	Proteobacteria	Gammaproteobacteria	4.73468	47.5	-	AKRM01	568	4619	4272	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141448	GCA_000268545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/545/GCA_000268545.1_ASM26854v1	-	PY-01
Staphylococcus aureus	1280	PRJNA300829	300829	Terrabacteria group	Firmicutes	3.13248	32.7367	chromosome:CP013959.1; plasmid pV605:CP013960.1	-	2	3240	3102	5/9/16	5/9/16	Complete Genome	Catholic university of Korea	SAMN04219581	GCA_001641045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/045/GCA_001641045.1_ASM164104v1	-	V605
endosymbiont 'TC1' of Trimyema compressum	243899	PRJNA313245	313245	Terrabacteria group	Firmicutes	1.62225	32.7316	chromosome:NZ_CP014606.1/CP014606.1; plasmid pTC1:NZ_CP014607.1/CP014607.1	-	2	2018	1722	3/10/16	6/24/17	Complete Genome	University of the Ryukyus	SAMN04506047	GCA_001584725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/725/GCA_001584725.1_ASM158472v1	-	-
Staphylococcus aureus subsp. aureus	46170	PRJNA321120	321120	Terrabacteria group	Firmicutes	2.92615	32.7306	chromosome:CP016861.1; plasmid unnamed1:CP016860.1	-	2	2977	2898	8/31/16	8/31/16	Complete Genome	Uniformed Services University	SAMN04966149	GCA_001717705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/705/GCA_001717705.1_ASM171770v1	-	1969.N
Staphylococcus aureus subsp. aureus	46170	PRJNA287791	287791	Terrabacteria group	Firmicutes	2.92653	32.7306	chromosome:NZ_CP012120.1/CP012120.1; plasmid unnamed:NZ_CP012121.1/CP012121.1	-	2	3081	2914	7/21/15	3/4/17	Complete Genome	Uniformed Services University of the Health Sciences	SAMN03787340	GCA_001183725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/725/GCA_001183725.1_ASM118372v1	-	USA300_2014.C02
Staphylococcus aureus subsp. aureus	46170	PRJNA321118	321118	Terrabacteria group	Firmicutes	2.95276	32.7298	chromosome:CP017094.1; plasmid p2148.CO1a:CP017095.1; plasmid p2148.CO1b:CP017096.1; plasmid p2148.CO1c:CP017097.1	-	4	3093	3013	9/1/16	9/1/16	Complete Genome	Uniformed Services University	SAMN04966147	GCA_001717975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/975/GCA_001717975.1_ASM171797v1	-	2148.CO1
Staphylococcus aureus	1280	PRJNA312385	312385	Terrabacteria group	Firmicutes	2.98509	32.7166	chromosome:NZ_CP014415.1/CP014415.1; plasmid pUSA04-1-SUR15:NZ_CP014416.1/CP014416.1; plasmid pUSA05-1-SUR15:NZ_CP014417.1/CP014417.1; plasmid pUSA07-1-SUR15:NZ_CP014418.1/CP014418.1; plasmid pUSA08-1-SUR15:NZ_CP014419.1/CP014419.1	-	5	3172	3007	2/16/17	3/6/17	Complete Genome	University Medical Center Groningen	SAMN04497609	GCA_002000685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/685/GCA_002000685.1_ASM200068v1	28106148	USA300-SUR15
Yersinia pestis PY-03	992129	PRJNA64285	64285	Proteobacteria	Gammaproteobacteria	4.68898	47.6	-	AKRO01	751	4651	4227	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141450	GCA_000268565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/565/GCA_000268565.1_ASM26856v1	-	PY-03
Staphylococcus aureus	1280	PRJNA312385	312385	Terrabacteria group	Firmicutes	2.98509	32.7166	chromosome:NZ_CP014444.1/CP014444.1; plasmid pUSA04-1-SUR24:NZ_CP014445.1/CP014445.1; plasmid pUSA05-1-SUR24:NZ_CP014446.1/CP014446.1; plasmid pUSA07-1-SUR24:NZ_CP014447.1/CP014447.1; plasmid pUSA08-1-SUR24:NZ_CP014448.1/CP014448.1	-	5	3172	3007	2/16/17	3/6/17	Complete Genome	University Medical Center Groningen	SAMN04497618	GCA_002000865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/865/GCA_002000865.1_ASM200086v1	28106148	USA300-SUR24
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.68236	31.9	-	JUXM01	135	2669	2573	7/10/15	3/26/17	Contig	University of Washington	SAMN03197880	GCA_001073895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/895/GCA_001073895.1_ASM107389v1	26230489	678_SEPI
Bacillus cereus BAG2X1-1	1053179	PRJNA70323	70323	Terrabacteria group	Firmicutes	5.18894	35.5	-	AHCZ01	8	5569	5106	8/16/12	6/15/17	Scaffold	Broad Institute	SAMN02596811	GCA_000291665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/665/GCA_000291665.1_Baci_cere_BAG2X1-1_G13209_V1	-	BAG2X1-1
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.49786	68.8	-	BDOK01	511	5219	4862	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076680	GCA_002089935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/935/GCA_002089935.1_ASM208993v1	28045086	Tone-15
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.78636	37.9	-	FFJF01	15	1760	1640	2/9/16	3/27/17	Scaffold	SC	SAMEA2674749	GCA_900034935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/935/GCA_900034935.1_14412_4_32	-	2842STDY5882060
Mycobacterium tuberculosis PanR0203	1344043	PRJNA207751	207751	Terrabacteria group	Actinobacteria	4.39767	65.4995	chromosome:NZ_CM002052.1/CM002052.1	ATML01	1	4289	4077	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471063	GCA_000443305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/305/GCA_000443305.1_fedora0203c_IS	23884993	PanR0203
Staphylococcus aureus	1280	PRJNA246401	246401	Terrabacteria group	Firmicutes	2.91559	32.7153	chromosome:NZ_CP007676.1/CP007676.1; plasmid pHUV05-01:NZ_CP007677.1/CP007677.1; plasmid pHUV05-02:NZ_CP007678.1/CP007678.1; plasmid pHUV05-03:NZ_CP007679.1/CP007679.1	-	4	3069	2894	10/23/15	3/5/17	Complete Genome	South American MRSA Consortium	SAMN02767311	GCA_001045995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/995/GCA_001045995.2_ASM104599v2	26048971	HUV05
Streptococcus pneumoniae GA47281	760831	PRJNA48853	48853	Terrabacteria group	Firmicutes	2.10565	39.8	-	AGNZ01	16	2308	2005	10/25/11	3/9/17	Contig	Institute for Genome Sciences	SAMN00792660	GCA_000232045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/045/GCA_000232045.2_ASM23204v2	-	GA47281
Helicobacter pylori GAM103Bi	1159021	PRJNA89213	89213	Proteobacteria	delta/epsilon subdivisions	1.61927	39.2	-	APCX01	44	1582	1433	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436854	GCA_000344965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/965/GCA_000344965.2_ASM34496v2	-	GAM103Bi
Neisseria meningitidis NS44	933290	PRJNA60869	60869	Proteobacteria	Betaproteobacteria	2.02209	51.9	-	AEPJ01	365	2290	1941	12/29/10	3/21/17	Contig	"University of Maryland, College Park"	SAMN02471875	GCA_000193815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/815/GCA_000193815.2_ASM19381v2	-	NS44
Streptococcus pyogenes ABC020026799	1439047	PRJNA233128	233128	Terrabacteria group	Firmicutes	1.86815	38.6	-	JJHG01	7	1931	1791	4/14/14	4/10/17	Scaffold	Broad Institute	SAMN02567477	GCA_000630785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/785/GCA_000630785.1_Stre_pyog_ABC020026799_V1	-	ABC020026799
Leptospira interrogans str. Kito	1193042	PRJNA167240	167240	Spirochaetes	Spirochaetia	4.68401	35	-	ANCF01	197	4266	3794	3/15/13	5/19/17	Contig	J. Craig Venter Institute	SAMN01162021	GCA_000347255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/255/GCA_000347255.1_gls454075v01	-	Kito
Bacillus anthracis	1392	PRJEB12289	314383	Terrabacteria group	Firmicutes	5.44156	35.1	-	FBXQ01	50	6059	5745	3/5/16	3/28/17	Contig	ANSES	SAMEA3720269	GCA_900013475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/475/GCA_900013475.1_ANSES_89	-	-
Shigella flexneri Shi06SX53	1434149	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.4446	50.5	-	AZPB01	301	4925	4248	1/29/14	2/23/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437384	GCA_000565925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/925/GCA_000565925.1_ASM56592v1	-	Shi06SX53
Pseudomonas aeruginosa PABL056	1214916	PRJNA171335	171335	Proteobacteria	Gammaproteobacteria	7.27768	65.5	-	ALPS01	390	7312	6838	8/16/12	3/18/17	Scaffold	Northwestern University Feinberg School of Medicine	SAMN02470713	GCA_000290555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/555/GCA_000290555.2_ASM29055v2	23045505	PABL056
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	3.94219	38.9	-	JSCH01	50	3818	3672	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068188	GCA_000804665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/665/GCA_000804665.1_ASM80466v1	25487793	2011BJAB4
Streptococcus agalactiae STIR-CD-22	1154850	PRJNA86359	86359	Terrabacteria group	Firmicutes	2.13568	35.6	-	ALRP01	54	2180	2053	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993718	GCA_000289175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/175/GCA_000289175.1_ASM28917v1	-	STIR-CD-22
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04823	41.1	-	CEIK01	66	2044	1946	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234008	GCA_000936795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/795/GCA_000936795.1_Velvet_assembly	-	S13I
Pseudomonas syringae pv. castaneae	264450	PRJNA287460	287460	Proteobacteria	Gammaproteobacteria	6.2592	57.9	-	LIIH01	218	6061	5349	1/25/16	3/27/17	Contig	University of Edinburgh	SAMN03992189	GCA_001538245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/245/GCA_001538245.1_ASM153824v1	27145446	CFBP 4217
Legionella pneumophila	446	PRJNA281156	281156	Proteobacteria	Gammaproteobacteria	3.47392	38.2	-	LBHM01	28	3164	3011	3/9/16	3/27/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03483393	GCA_001583645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/645/GCA_001583645.1_ASM158364v1	26888563	SZ026
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.69168	50.8	-	NQCD01	83	4860	4514	8/11/17	8/15/17	Contig	JCVI	SAMN07450625	GCA_002248755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/755/GCA_002248755.1_ASM224875v1	-	ECSW+14
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.37268	66.9	-	MUUD01	132	6964	6588	2/10/17	4/2/17	Contig	University of British Columbia	SAMN05001931	GCA_001992695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/695/GCA_001992695.1_ASM199269v1	-	VC9958
Burkholderia pseudomallei MSHR4372	1434198	PRJNA230728	230728	Proteobacteria	Betaproteobacteria	7.1789	68.2	-	JPQJ01	2	7352	6808	11/11/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02943397	GCA_000774245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/245/GCA_000774245.1_BCW_15	25676747	MSHR4372
Chlamydia trachomatis	813	PRJEB2035	203744	PVC group	Chlamydiae	1.07442	41.1	-	CVNJ01	7	1006	933	4/21/15	3/26/17	Scaffold	SC	SAMEA1398275	GCA_001317785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/785/GCA_001317785.1_7396_3_13	-	R28017IMS
Bacillus thuringiensis serovar aizawai	1433	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.56277	34.9	-	NFES01	213	6955	6409	5/17/17	6/15/17	Contig	Huazhong Agricultural University	SAMN05934570	GCA_002147645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/645/GCA_002147645.1_ASM214764v1	-	T07148
Vibrio cholerae O1 str. EC-0051	1095654	PRJNA76243	76243	Proteobacteria	Gammaproteobacteria	4.06937	47.4	-	APFS01	99	3949	3770	3/22/13	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00989301	GCA_000348225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/225/GCA_000348225.2_ASM34822v2	-	EC-0051
Clostridioides difficile 6041	1151313	PRJNA85801	85801	Terrabacteria group	Firmicutes	4.02657	28.2	-	AVIP01	174	3730	3554	8/20/13	3/15/17	Contig	Institute for Genome Sciences	SAMN01766561	GCA_000449845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/845/GCA_000449845.1_ASM44984v1	-	6041
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.7761	32.2	-	MRKF01	137	1829	1546	4/19/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773897	GCA_002100865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/865/GCA_002100865.1_ASM210086v1	28348839	FDC425
Brucella abortus 78/36	1160189	PRJNA173598	173598	Proteobacteria	Alphaproteobacteria	3.27854	57.2	-	AQLN01	6	3348	3105	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811160	GCA_000366325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/325/GCA_000366325.1_Bruc_abor_78_36_V1	-	78/36
Xanthomonas oryzae pv. oryzae	64187	PRJNA269476	269476	Proteobacteria	Gammaproteobacteria	4.37661	63.8	-	JXGU01	431	4388	3500	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252565	GCA_001929015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/015/GCA_001929015.1_ASM192901v1	-	IXO644
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.90032	37.8	-	MLNH01	262	1953	1699	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297073	GCA_001868655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/655/GCA_001868655.1_ASM186865v1	27118061	AWRIB438
Vibrio parahaemolyticus S155	1394688	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.05968	45.3	-	AWHY01	577	4820	4572	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02339002	GCA_000489375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/375/GCA_000489375.1_S155	-	S155
Bacillus subtilis	1423	PRJNA349971	349971	Terrabacteria group	Firmicutes	4.29117	43.7	-	MOOX01	89	4362	4135	4/14/17	4/21/17	Contig	Ennolys	SAMN05933385	GCA_002093785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/785/GCA_002093785.1_ASM209378v1	27825987	CU1
Staphylococcus aureus subsp. aureus	46170	PRJNA321116	321116	Terrabacteria group	Firmicutes	2.95994	32.7008	chromosome:CP016858.1; plasmid unnamed1:CP016857.1; plasmid unnamed2:CP016859.1	-	3	3097	3021	8/31/16	8/31/16	Complete Genome	Uniformed Services University	SAMN04966145	GCA_001717685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/685/GCA_001717685.1_ASM171768v1	-	1971.CO1
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.85661	28	-	LFOY01	48	3740	3581	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779952	GCA_001573515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/515/GCA_001573515.1_ASM157351v1	26939550	McClung 844
Enterococcus faecalis EnGen0110	1157348	PRJNA88195	88195	Terrabacteria group	Firmicutes	3.2934	37.1	-	AIQB01	41	3470	3286	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808979	GCA_000391145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/145/GCA_000391145.1_Ente_faec_B1678_V1	-	B1678
Streptococcus mutans G123	857134	PRJNA49795	49795	Terrabacteria group	Firmicutes	1.97704	36.7	-	AHSC01	122	1957	1864	2/11/13	3/23/17	Contig	Cornell University	SAMN02428931	GCA_000339815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/815/GCA_000339815.1_ASM33981v1	23228887	G123
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.15757	52.4	-	CQNQ01	59	2514	2191	3/22/15	4/18/17	Contig	SC	SAMEA1690458	GCA_001118585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/585/GCA_001118585.1_8289_2_12	-	GCGS012
Enterococcus faecium EnGen0040	1138910	PRJNA82471	82471	Terrabacteria group	Firmicutes	2.6253	38.2	-	AHXL01	6	2682	2450	12/17/12	4/10/17	Scaffold	Broad Institute	SAMN00779824	GCA_000322045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/045/GCA_000322045.1_Ente_faec_E1634_V1	-	E1634
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.73292	66.4	-	JVMF01	33	4441	4297	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197497	GCA_001072195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/195/GCA_001072195.1_ASM107219v1	26230489	305_SMAL
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12754	41.2	-	CWDY01	77	2049	1879	6/23/15	3/26/17	Contig	SC	SAMEA1032895	GCA_001177325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/325/GCA_001177325.1_6903_8_51	-	EQUI0196
Pasteurella multocida subsp. gallicida str. Anand1_poultry	1032866	PRJNA66361	66361	Proteobacteria	Gammaproteobacteria	2.22794	40.2	-	AFRR01	489	2334	2284	6/24/11	1/8/14	Contig	"Department of Veterinary Microbiology, College of Veterinary Science and Animal Husbandry, Anand Agricultural University, Anand, Gujarat, India"	SAMN02469635	GCA_000219315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/315/GCA_000219315.2_ASM21931v2	21914901	Anand1_poultry
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.68795	46.6	-	JUIN01	973	3046	2792	7/1/15	8/18/15	Contig	Wageningen University	SAMN03196659	GCA_001044095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/095/GCA_001044095.1_ASM104409v1	26048937	Lr032
Brucella melitensis	29459	PRJNA257008	257008	Proteobacteria	Alphaproteobacteria	3.28998	57.2	-	LUFL01	26	3362	3112	4/4/16	4/5/17	Contig	µFORGE	SAMN04260152	GCA_001608355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/355/GCA_001608355.1_BMEL002-SEQ-1-ASM-1	-	BRUC048
Francisella noatunensis subsp. noatunensis FSC772	1089433	PRJNA73449	73449	Proteobacteria	Gammaproteobacteria	1.93382	32.7	chromosome:NZ_CP022207.1/CP022207.1	-	1	1891	1754	7/3/17	7/5/17	Complete Genome	Swedish Defence Research Agency	SAMN00993442	GCA_002214225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/225/GCA_002214225.1_ASM221422v1	-	FSC772
Corynebacterium diphtheriae bv. mitis	1806053	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.39871	53.6	-	LSXK01	45	2328	2116	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496993	GCA_002203015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/015/GCA_002203015.1_S97	-	4288
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.62	47.1	-	CTIT01	23	4316	4107	3/26/15	3/26/17	Scaffold	SC	SAMEA980137	GCA_001217745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/745/GCA_001217745.1_4976_6_4	-	YE208/02
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.10771	60	-	FCJJ01	15	4856	4694	1/21/16	3/27/17	Scaffold	SC	SAMEA2274000	GCA_001536405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/405/GCA_001536405.1_12082_3_29	-	2880STDY5682928
Lactobacillus plantarum	1590	PRJNA315185	315185	Terrabacteria group	Firmicutes	2.99513	44.9	-	LUSM01	134	2910	2694	5/23/16	3/28/17	Contig	ICAR-National Research Centre on Camel	SAMN04550865	GCA_001649985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/985/GCA_001649985.1_ASM164998v1	-	NRCC1
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69115	31.3	-	CUNC01	14	1748	1661	3/31/15	3/18/17	Contig	SC	SAMEA1010632	GCA_001237325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/325/GCA_001237325.1_7065_7_52	-	OXC6400
Burkholderia sp. JGI 0001021-N16	1268348	PRJNA183582	183582	Proteobacteria	Betaproteobacteria	0.273795	60.1	-	AXXZ01	56	-	-	10/25/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02440749	GCA_000483205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/205/GCA_000483205.1_ASM48320v1	-	JGI 0001021-N16
Cutibacterium acnes	1747	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.28067	59.8	-	DCOS01	104	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455029	GCA_002322935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/935/GCA_002322935.1_ASM232293v1	28894102	-
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.90173	32.7	-	CUHP01	311	2903	2588	3/31/15	4/21/17	Scaffold	SC	SAMEA1035119	GCA_001229605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/605/GCA_001229605.1_7068_7_9	-	643
Enterobacter cloacae	550	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	4.78797	55	-	NJCP01	44	4610	4435	8/2/17	8/4/17	Contig	JCVI	SAMN05960961	GCA_002239955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/955/GCA_002239955.1_ASM223995v1	-	HB_Z_2347
Cronobacter sakazakii	28141	PRJNA248274	248274	Proteobacteria	Gammaproteobacteria	4.563	56.7	-	JNDH01	102	4386	3450	1/25/17	8/14/17	Scaffold	"Nottingham Trent University, UK"	SAMN02796170	GCA_001971445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/445/GCA_001971445.1_ASM197144v1	-	1220
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.20218	64.1	-	FVAT01	11	5317	5144	3/10/17	3/18/17	Contig	SC	SAMEA2071246	GCA_900130275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/275/GCA_900130275.1_10625_5_60	-	145
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.13676	67.5	-	LPDJ01	106	6459	6109	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449428	GCA_001528865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/865/GCA_001528865.1_ASM152886v1	-	MSMB1079WGS
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.92608	38.7	-	NGGT01	62	3800	3620	5/16/17	5/24/17	Contig	JCVI	SAMN06892236	GCA_002143515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/515/GCA_002143515.1_ASM214351v1	-	ARLG1803
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.97014	55.3	-	LEEA01	31	4864	4683	6/9/15	3/26/17	Contig	JCVI	SAMN03732702	GCA_001022365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/365/GCA_001022365.1_ASM102236v1	-	GN02382
Klebsiella aerogenes	548	PRJNA315168	315168	Proteobacteria	Gammaproteobacteria	5.63747	54.7	-	LULD01	59	5702	5355	6/14/16	4/6/17	Scaffold	National Institutes of Health	SAMN04550335	GCA_001662715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/715/GCA_001662715.1_ASM166271v1	27833588	E9
Pseudomonas sp. GM55	1144333	PRJNA83091	83091	Proteobacteria	Gammaproteobacteria	6.48933	59.7	-	AKJJ01	163	5999	5779	7/27/12	5/24/17	Contig	Oak Ridge National Lab	SAMN00839644	GCA_000282395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/395/GCA_000282395.1_GM55.fsa	23045501	GM55
Streptomyces sp. SS07	2015315	PRJNA391780	391780	Terrabacteria group	Actinobacteria	7.60385	71.7	-	NKHN01	3	6867	6651	7/13/17	7/15/17	Scaffold	Fujian Agriculture and Forestry university	SAMN07275199	GCA_002217715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/715/GCA_002217715.1_ASM221771v1	-	SS07
Bacillus sp. AM 13(2015)	1739115	PRJNA295799	295799	Terrabacteria group	Firmicutes	3.73466	41.6	-	LKCP01	99	3859	3538	1/20/16	4/11/17	Contig	Government Medical College	SAMN04088739	GCA_001518755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/755/GCA_001518755.1_ASM151875v1	-	AM 13
Acinetobacter sp. 72431	1310685	PRJNA194761	194761	Proteobacteria	Gammaproteobacteria	4.40444	38.9	-	JMNZ01	372	4402	3966	5/6/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02692971	GCA_000682355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/355/GCA_000682355.1_ASM68235v1	-	72431
Clostridium sp. CAG:169	1262778	PRJEB737	206582	Terrabacteria group	Firmicutes	2.04867	51.5	-	CBCF01	186	2005	1970	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138646	GCA_000435195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/195/GCA_000435195.1_MGS169	-	-
Sphingomonas sp. 12-62-6	1970431	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.30389	62.4	-	NCCL01	198	2400	2173	8/16/17	8/16/17	Scaffold	None	SAMN06622399	GCA_002279655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/279/655/GCA_002279655.1_ASM227965v1	-	-
Rhodococcus sp. ACPA1	2028572	PRJNA272922	272922	Terrabacteria group	Actinobacteria	10.0608	66.9	-	NSDX01	47	9292	8798	9/13/17	9/15/17	Scaffold	University of East Anglia	SAMN07511352	GCA_002300195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/195/GCA_002300195.1_ASM230019v1	-	ACPA1
Enterobacter sp. SENG-6	1247402	PRJNA305304	305304	Proteobacteria	Gammaproteobacteria	5.03042	54.8	-	LOMM01	78	4942	4685	4/4/16	4/12/17	Scaffold	University of Minnesota	SAMN04324026	GCA_001605945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/945/GCA_001605945.1_ASM160594v1	-	SENG-6
Staphylococcus sp. HMSC063F03	1715128	PRJNA296256	296256	Terrabacteria group	Firmicutes	2.41833	31.9	-	LWQC01	71	2368	2257	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498626	GCA_001837035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/035/GCA_001837035.1_ASM183703v1	-	HMSC063F03
Corynebacterium sp. NML99-0020	702969	PRJNA399534	399534	Terrabacteria group	Actinobacteria	2.48306	65.6	-	NSGN01	19	2295	2185	9/4/17	9/6/17	Contig	National Microbiology Laboratory/ Public Health Agency of Canada	SAMN07539809	GCA_002285125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/125/GCA_002285125.1_ASM228512v1	-	NML99-0020
Streptococcus sp. CM6	936580	PRJNA165939	165939	Terrabacteria group	Firmicutes	1.92165	41.3	-	JATS01	27	1942	1815	1/31/14	4/17/17	Contig	JCVI	SAMN02641576	GCA_000526095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/095/GCA_000526095.1_SspCM6v1.0	-	CM6
Prevotella sp. UBA2809	1947116	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.85824	46.4	-	DEHD01	43	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06450900	GCA_002351725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/351/725/GCA_002351725.1_ASM235172v1	28894102	-
Mycobacterium sp. E183	1834129	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.67222	68.4	-	LZJN01	222	5443	5101	6/17/16	4/12/17	Contig	JCVI	SAMN04634229	GCA_001667735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/735/GCA_001667735.1_ASM166773v1	-	E183
Paenibacillus sp. UNC496MF	1502753	PRJEB17380	351590	Terrabacteria group	Firmicutes	7.36545	60.4	-	FORE01	40	6688	6419	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02799624	GCA_900113915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/915/GCA_900113915.1_IMG-taxon_2593339199_annotated_assembly	-	UNC496MF
Prochlorococcus sp. scB245a_518I6	1471505	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.36854	31.5	-	JFND01	308	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671376	GCA_000635715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/715/GCA_000635715.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Rhizobium sp. 63-7	1895820	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	4.62579	62	-	MKRF01	206	4546	3578	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660496	GCA_001896825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/825/GCA_001896825.1_ASM189682v1	-	-
Rhizobium sp. 60-20	1895819	PRJNA279279	279279	Proteobacteria	Alphaproteobacteria	7.9325	60.1	-	MKWB01	60	7522	7353	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660622	GCA_001899545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/545/GCA_001899545.1_ASM189954v1	-	-
Prochlorococcus sp. scB245a_519D13	1471512	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.40985	31.4	-	JFNK01	426	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671383	GCA_000635735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/735/GCA_000635735.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Paenibacillus sp. 1_12	1566278	PRJEB17450	351621	Terrabacteria group	Firmicutes	7.61835	44.4	-	FOTE01	70	6832	6517	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159341	GCA_900114475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/475/GCA_900114475.1_IMG-taxon_2602042071_annotated_assembly	-	1_12
Mycobacterium sp. E1319	1834124	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.35952	69.6	-	LZJL01	185	5068	4745	6/17/16	4/13/17	Contig	JCVI	SAMN04634231	GCA_001667745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/745/GCA_001667745.1_ASM166774v1	-	E1319
Prevotella sp. UBA2811	1947117	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.79194	47.6	-	DEHB01	38	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06455939	GCA_002351735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/351/735/GCA_002351735.1_ASM235173v1	28894102	-
Streptococcus sp. AC15	936575	PRJNA165925	165925	Terrabacteria group	Firmicutes	1.99481	38.5	-	JDFJ01	59	1930	1831	2/6/14	4/17/17	Contig	JCVI	SAMN02344614	GCA_000565055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/055/GCA_000565055.1_SspAC15v1.0	-	AC15
Corynebacterium sp. NML00-0156	702953	PRJNA399534	399534	Terrabacteria group	Actinobacteria	2.51659	65.6	-	NSGM01	23	2320	2200	9/4/17	9/6/17	Contig	National Microbiology Laboratory/ Public Health Agency of Canada	SAMN07539810	GCA_002285175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/175/GCA_002285175.1_ASM228517v1	-	NML00-0156
Staphylococcus sp. HMSC063E12	1715018	PRJNA296145	296145	Terrabacteria group	Firmicutes	2.57412	33.7	-	LTPV01	48	2445	2364	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498493	GCA_001837045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/045/GCA_001837045.1_ASM183704v1	-	HMSC063E12
Enterobacter sp. IF2SW-B1	1841143	PRJNA319366	319366	Proteobacteria	Gammaproteobacteria	5.11009	55.2	-	MJAA01	415	4940	4699	9/24/16	4/13/17	Scaffold	"Jet Propulsion Laboratory, California Institute of Technology"	SAMN04902365	GCA_001743375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/743/375/GCA_001743375.1_ASM174337v1	-	IF2SW-B1
Rhodococcus sp. 164Chir2E	1502766	PRJEB15716	347660	Terrabacteria group	Actinobacteria	6.25807	62.5	-	FMVB01	46	5884	5718	10/17/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02799641	GCA_900101565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/565/GCA_900101565.1_IMG-taxon_2593339195_annotated_assembly	-	164Chir2E
Sphingomonas sp. 32-62-10	1970436	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.97626	62.3	-	NCEE01	42	2966	2822	8/16/17	8/16/17	Scaffold	None	SAMN06622354	GCA_002280555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/555/GCA_002280555.1_ASM228055v1	-	-
Clostridium sp. CAG:557	1262819	PRJEB930	206768	Terrabacteria group	Firmicutes	1.11434	34.6	-	CBDG01	91	1138	1118	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138650	GCA_000435275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/275/GCA_000435275.1_MGS557	-	-
Acinetobacter sp. 796380-1375	1310833	PRJNA194909	194909	Proteobacteria	Gammaproteobacteria	4.14608	38.8	-	JMOS01	93	4180	3793	5/6/14	4/6/17	Contig	Institute for Genome Sciences	SAMN02692983	GCA_000682615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/615/GCA_000682615.1_ASM68261v1	-	796380-1375
Bacillus sp. GZT	936600	PRJNA316514	316514	Terrabacteria group	Firmicutes	5.18879	35.1	-	LVVJ01	96	5616	5364	4/5/16	4/17/17	Contig	Guangzhou Institute of Geochemistry Chinese Academy of Sciences	SAMN04584779	GCA_001611175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/175/GCA_001611175.1_ASM161117v1	27257197	GZT
Streptomyces sp. SA3_actG	683219	PRJNA49357	49357	Terrabacteria group	Actinobacteria	7.44308	73.3	-	ADXA01	254	6611	6225	6/23/10	5/19/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN02441809	GCA_000179195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/195/GCA_000179195.1_ASM17919v1	-	SA3_actG
Pseudomonas sp. GM60	1144334	PRJNA83093	83093	Proteobacteria	Gammaproteobacteria	6.42424	59.6	-	AKJI01	181	5962	5779	7/27/12	5/19/17	Contig	Oak Ridge National Lab	SAMN00839645	GCA_000282415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/415/GCA_000282415.1_GM60.fsa	23045501	GM60
Klebsiella aerogenes	548	PRJNA310023	310023	Proteobacteria	Gammaproteobacteria	5.83352	54.6	-	LUTZ01	58	5937	5584	6/14/16	4/10/17	Scaffold	National Institutes of Health	SAMN04445568	GCA_001662765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/765/GCA_001662765.1_ASM166276v1	27833588	C10
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.18466	54.9	-	LEDY01	60	5124	4884	6/9/15	3/26/17	Contig	JCVI	SAMN03732704	GCA_001022425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/425/GCA_001022425.1_ASM102242v1	-	GN02414
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.13698	38.8	-	NGGW01	44	3996	3854	5/16/17	5/24/17	Contig	JCVI	SAMN06892233	GCA_002143595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/595/GCA_002143595.1_ASM214359v1	-	ARLG1807
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.72665	66.9	-	LPDO01	156	7071	6616	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449433	GCA_001528875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/875/GCA_001528875.1_ASM152887v1	-	MSMB1137WGS
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.20071	64.1	-	FVAG01	27	5331	5146	3/10/17	3/18/17	Contig	SC	SAMEA2070830	GCA_900130285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/285/GCA_900130285.1_10071_6_83	-	168
Cronobacter sakazakii	28141	PRJNA246712	246712	Proteobacteria	Gammaproteobacteria	4.59797	56.6	-	JMSR01	415	4533	3737	1/26/17	4/6/17	Scaffold	"Nottingham Trent University, UK"	SAMN02769636	GCA_001972225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/225/GCA_001972225.1_ASM197222v1	-	4
Enterobacter cloacae	550	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.17071	54.9	-	NPGF01	90	5263	4923	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07359424	GCA_002264065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/065/GCA_002264065.1_ASM226406v1	-	E987
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.44326	32.7	-	CUFZ01	82	2404	2298	3/31/15	4/21/17	Scaffold	SC	SAMEA1035038	GCA_001229765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/765/GCA_001229765.1_7068_7_32	-	115472
Cutibacterium acnes	1747	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.44262	59.4	-	DGDE01	88	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454031	GCA_002385275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/275/GCA_002385275.1_ASM238527v1	28894102	-
Burkholderia sp. JGI 0001021-E12	1268337	PRJNA183571	183571	Proteobacteria	Betaproteobacteria	0.407238	59.7	-	AXYE01	98	-	-	10/25/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02440732	GCA_000483245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/245/GCA_000483245.1_ASM48324v1	-	JGI 0001021-E12
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.68304	31.3	-	CUHY01	17	1750	1653	3/31/15	3/18/17	Contig	SC	SAMEA1010373	GCA_001237925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/925/GCA_001237925.1_7038_3_18	-	OXC6267
Lactobacillus plantarum	1590	PRJNA312934	312934	Terrabacteria group	Firmicutes	3.30971	44.4	-	LTAU01	48	3196	3058	5/25/16	3/28/17	Contig	Institute of Functional Genomics Lyon (IGFL)	SAMN04510483	GCA_001651845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/845/GCA_001651845.1_ASM165184v1	-	Nizo1837
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.10501	59.9	-	FCLV01	27	4799	4642	1/21/16	3/27/17	Scaffold	SC	SAMEA2274070	GCA_001536425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/425/GCA_001536425.1_12082_3_92	-	2880STDY5682998
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.83529	47.3	-	CTKN01	51	4540	4319	3/26/15	3/26/17	Scaffold	SC	SAMEA980169	GCA_001218005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/005/GCA_001218005.1_5103_7_11	-	YE35/02
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.45905	53.5	-	LSXQ01	26	2386	2205	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497005	GCA_002203055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/055/GCA_002203055.1_S103	-	4728
Staphylococcus haemolyticus	1283	PRJNA279309	279309	Terrabacteria group	Firmicutes	2.56137	32.7	chromosome:CP011116.1	-	1	2532	2417	4/16/15	5/27/15	Complete Genome	USP	SAMN03436301	GCA_000972725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/725/GCA_000972725.1_ASM97272v1	-	Sh29/312/L2
Brucella melitensis	29459	PRJNA257008	257008	Proteobacteria	Alphaproteobacteria	3.29136	57.2	-	LUFK01	22	3360	3115	4/4/16	4/5/17	Contig	µFORGE	SAMN04260151	GCA_001608425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/425/GCA_001608425.1_BMEL003-SEQ-1-ASM-1	-	BRUC101
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.59769	46.3	-	JUIM01	1331	3136	2936	7/1/15	8/18/15	Contig	Wageningen University	SAMN03196658	GCA_001044105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/105/GCA_001044105.1_ASM104410v1	26048937	Lr044
Pasteurella multocida subsp. multocida str. Anand1_buffalo	1032868	PRJNA66359	66359	Proteobacteria	Gammaproteobacteria	2.04561	40.9	-	ALBX01	2188	3246	3217	8/17/12	1/8/14	Contig	"Department of Veterinary Microbiology, College of Veterinary Science and Animal Husbandry, Anand Agricultural University, Anand, Gujarat, India"	SAMN02469637	GCA_000291625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/625/GCA_000291625.1_ASM29162v1	-	Anand1_buffalo
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.1324	41.2	-	CVYS01	78	2068	1889	6/23/15	3/26/17	Contig	SC	SAMEA1032898	GCA_001177345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/345/GCA_001177345.1_6830_4_87	-	EQUI0232
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.14449	65.7	-	JVMC01	258	4830	4639	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197500	GCA_001072215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/215/GCA_001072215.1_ASM107221v1	26230489	31_SMAL
Enterococcus faecium EnGen0036	1138913	PRJNA82477	82477	Terrabacteria group	Firmicutes	2.99172	38	-	AHXO01	23	3064	2828	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779827	GCA_000322065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/065/GCA_000322065.1_Ente_faec_E1731_V1	-	E1731
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.15368	52.4	-	CQMB01	76	2526	2207	3/22/15	4/11/17	Contig	SC	SAMEA1690443	GCA_001119185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/185/GCA_001119185.1_8727_8_34	-	GCGS130
Streptococcus mutans M21	857133	PRJNA49797	49797	Terrabacteria group	Firmicutes	1.96197	36.8	-	AHSD01	106	1945	1845	2/11/13	3/23/17	Contig	Cornell University	SAMN02429075	GCA_000339835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/835/GCA_000339835.1_ASM33983v1	23228887	M21
Enterococcus faecalis EnGen0091	1157349	PRJNA88197	88197	Terrabacteria group	Firmicutes	3.34189	37.2	-	AIQC01	9	3510	3326	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808990	GCA_000391165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/165/GCA_000391165.1_Ente_faec_B1696_V1	-	B1696
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.89677	28	-	LFOZ01	98	3749	3613	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779953	GCA_001573535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/535/GCA_001573535.1_ASM157353v1	26939550	KF Meyer 33
Flavobacterium psychrophilum FPG3	1452724	PRJNA236029	236029	FCB group	Bacteroidetes/Chlorobi group	2.71591	32.7	chromosome:NZ_CP007207.1/CP007207.1	-	1	2433	2311	9/12/14	4/2/17	Complete Genome	"Ontario Veterinary College, University of Guelph"	SAMN03290988	GCA_000754405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/405/GCA_000754405.1_ASM75440v1	25685258	FPG3
Bacillus subtilis subsp. subtilis	135461	PRJNA238340	238340	Terrabacteria group	Firmicutes	4.30415	43	-	JFBP01	266	4589	4332	5/16/17	5/24/17	Contig	"Wageningen University, The Netherlands"	SAMN02643343	GCA_002142515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/515/GCA_002142515.1_ASM214251v1	-	M1
Vibrio parahaemolyticus S154	1394687	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.02297	45.4	-	AWHZ01	687	4910	4480	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02339001	GCA_000489395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/395/GCA_000489395.1_S154	-	S154
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.87066	37.8	-	MLNI01	352	1900	1661	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297074	GCA_001868675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/675/GCA_001868675.1_ASM186867v1	27118061	AWRIB441
Xanthomonas oryzae pv. oryzae	64187	PRJNA269478	269478	Proteobacteria	Gammaproteobacteria	4.34375	63.9	-	JXGW01	457	4296	3488	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252552	GCA_001929065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/065/GCA_001929065.1_ASM192906v1	-	IXO651
Brucella abortus 80/102	1160203	PRJNA173625	173625	Proteobacteria	Alphaproteobacteria	3.27851	57.2	-	AQLO01	5	3364	3136	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811162	GCA_000366345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/345/GCA_000366345.1_Bruc_abor_80_102_V1	-	80/102
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.77634	32.2	-	MRKJ01	138	1827	1530	4/19/17	8/21/17	Contig	FOI Swedish Defence Research Agency	SAMN03773893	GCA_002100925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/925/GCA_002100925.1_ASM210092v1	28348839	FDC421
Clostridioides difficile 6042	1151314	PRJNA85803	85803	Terrabacteria group	Firmicutes	3.94592	28.2	-	AVIQ01	314	3625	3463	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766562	GCA_000449865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/865/GCA_000449865.2_ASM44986v2	-	6042
Vibrio cholerae O1 str. EDC-020	1095640	PRJNA76215	76215	Proteobacteria	Gammaproteobacteria	4.02819	47.5	-	APFT01	85	3841	3681	3/22/13	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00989315	GCA_000348245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/245/GCA_000348245.2_ASM34824v2	-	EDC-020
Bacillus thuringiensis serovar aizawai	1433	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.48365	34.9	-	NFEU01	200	6923	6360	5/17/17	6/15/17	Contig	Huazhong Agricultural University	SAMN05934572	GCA_002147685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/685/GCA_002147685.1_ASM214768v1	-	T07153
Chlamydia trachomatis	813	PRJEB2035	203744	PVC group	Chlamydiae	1.0549	41.3	-	CVNL01	21	976	905	4/21/15	3/26/17	Scaffold	SC	SAMEA1398291	GCA_001317805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/805/GCA_001317805.1_7396_3_14	-	R27091IMS
Burkholderia pseudomallei TSV 43	1434202	PRJNA230736	230736	Proteobacteria	Betaproteobacteria	7.31581	68	-	JPQK01	2	7516	6945	11/11/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02943428	GCA_000774255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/255/GCA_000774255.1_BCW_19	25676747	TSV 43
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.50521	67.1	-	MUUE01	61	7013	6710	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001932	GCA_001992705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/705/GCA_001992705.1_ASM199270v1	-	VC12792
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.80741	50.7	-	NQCB01	192	5082	4642	8/11/17	8/15/17	Contig	JCVI	SAMN07450627	GCA_002248785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/785/GCA_002248785.1_ASM224878v1	-	ECSW+12
Legionella pneumophila 130b	866628	PRJEA51615	51615	Proteobacteria	Gammaproteobacteria	3.474	38.2	-	CAFM01	159	3230	2936	10/11/11	3/24/17	Contig	"University of Queensland, Australia"	SAMEA2272454	GCA_000211115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/211/115/GCA_000211115.2_ASM21111v2	20833813	130b
Pseudomonas syringae pv. daphniphylli	264455	PRJNA287460	287460	Proteobacteria	Gammaproteobacteria	6.25608	58.1	-	LIIF01	355	6155	5292	1/25/16	3/27/17	Contig	University of Edinburgh	SAMN03992192	GCA_001538255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/255/GCA_001538255.1_ASM153825v1	27145446	CFBP 4219
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04855	41.1	-	CEJE01	61	2040	1949	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233981	GCA_000936815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/815/GCA_000936815.1_Velvet_assembly	-	S11H
Streptococcus agalactiae STIR-CD-23	1154851	PRJNA86361	86361	Terrabacteria group	Firmicutes	2.02633	35.3	-	ALRQ01	50	2091	1971	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993454	GCA_000289195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/195/GCA_000289195.1_ASM28919v1	-	STIR-CD-23
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	3.81494	39	-	JSCM01	46	3652	3509	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068198	GCA_000804715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/715/GCA_000804715.1_ASM80471v1	25487793	2004BJAB14
Pseudomonas aeruginosa NCMG1179	1078464	PRJDA72409	72409	Proteobacteria	Gammaproteobacteria	7.0597	65.2	-	BADP01	92	6531	6193	8/26/11	5/19/17	Scaffold	National Center for Global Health and Medicine	SAMD00036585	GCA_000291745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/745/GCA_000291745.1_ASM29174v1	22038962	NCGM1179
Shigella flexneri 2002007	1434150	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.36656	50.6	-	AZPC01	274	4819	4135	1/29/14	2/22/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437385	GCA_000565945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/945/GCA_000565945.1_ASM56594v1	-	2002007
Bacillus anthracis	1392	PRJEB12289	314383	Terrabacteria group	Firmicutes	5.44041	35.1	-	FBXO01	58	6054	5741	3/5/16	3/28/17	Contig	ANSES	SAMEA3720271	GCA_900013485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/485/GCA_900013485.1_ANSES_92	-	-
Leptospira interrogans serovar Lai	57678	PRJNA255705	255705	Spirochaetes	Spirochaetia	4.89158	35.1	-	JPUB01	415	4557	4159	9/25/14	4/10/17	Contig	University of Hyderabad	SAMN02928167	GCA_000758025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/025/GCA_000758025.1_ASM75802v1	-	SR61
Streptococcus pyogenes ABC020026287	1439043	PRJNA233125	233125	Terrabacteria group	Firmicutes	1.87093	38.6	-	JJHH01	3	1942	1802	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567474	GCA_000630805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/805/GCA_000630805.1_Stre_pyog_ABC020026287_V1	-	ABC020026287
Neisseria meningitidis Nm8187	1077282	PRJNA72341	72341	Proteobacteria	Betaproteobacteria	2.08307	51.8	-	AGBN01	173	2380	2066	12/29/11	3/15/17	Contig	University of Toronto	SAMN02471961	GCA_000240545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/545/GCA_000240545.2_ASM24054v2	22084315	Nm8187
Helicobacter pylori GAM105Ai	1159022	PRJNA89215	89215	Proteobacteria	delta/epsilon subdivisions	1.66661	39.2	-	APCY01	46	1644	1459	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436855	GCA_000344985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/985/GCA_000344985.2_ASM34498v2	-	GAM105Ai
Streptococcus pneumoniae GA47033	760828	PRJNA48845	48845	Terrabacteria group	Firmicutes	2.10648	39.8	-	AGOA01	10	2310	2004	10/25/11	3/9/17	Contig	Institute for Genome Sciences	SAMN00792657	GCA_000232065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/065/GCA_000232065.2_ASM23206v2	-	GA47033
Candidatus Walczuchella monophlebidarum	1415657	PRJNA225831	225831	FCB group	Bacteroidetes/Chlorobi group	0.309299	32.7	chromosome:NZ_CP006873.1/CP006873.1	-	1	323	265	6/17/14	9/24/17	Complete Genome	"Centro de Ciencias Genomicas, UNAM"	SAMN03081499	GCA_000709555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/555/GCA_000709555.1_ASM70955v1	24610838	-
Mycobacterium tuberculosis PanR0205	1344044	PRJNA207752	207752	Terrabacteria group	Actinobacteria	4.40881	65.3993	chromosome:NZ_CM002053.1/CM002053.1	ATMM01	1	4319	4067	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471103	GCA_000443325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/325/GCA_000443325.1_fedora0205e_IS	23884993	PanR0205
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.86896	38	-	FFJK01	21	1899	1754	2/9/16	3/27/17	Scaffold	SC	SAMEA2674784	GCA_900034945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/945/GCA_900034945.1_14412_4_58	-	2842STDY5882086
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.35424	68.9	-	BDOL01	226	5059	4766	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076691	GCA_002089955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/955/GCA_002089955.1_ASM208995v1	28045086	Tone-16
Bacillus cereus BAG4X2-1	1053187	PRJNA70339	70339	Terrabacteria group	Firmicutes	5.72513	35.2	-	AHDH01	7	6025	5669	8/27/12	6/15/17	Scaffold	Broad Institute	SAMN02596819	GCA_000293505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/505/GCA_000293505.1_Baci_cere_BAG4X2-1_G13197_V1	-	BAG4X2-1
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.49343	32	-	JUXD01	147	2451	2369	7/10/15	3/26/17	Contig	University of Washington	SAMN03197889	GCA_001073935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/935/GCA_001073935.1_ASM107393v1	26230489	686_SEPI
Staphylococcus pasteuri SP1	1276282	PRJNA184845	184845	Terrabacteria group	Firmicutes	2.55995	32.7	chromosome:NC_022737.1/CP004014.1	-	1	2507	2398	11/1/13	4/9/17	Complete Genome	Kyung Hee University	SAMN02603493	GCA_000494875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/875/GCA_000494875.1_ASM49487v1	-	SP1
Yersinia pestis PY-04	992130	PRJNA64287	64287	Proteobacteria	Gammaproteobacteria	4.76175	47.5	-	AKRP01	528	4668	4281	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141451	GCA_000268585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/585/GCA_000268585.1_ASM26858v1	-	PY-04
Staphylococcus aureus	1280	PRJNA273427	273427	Terrabacteria group	Firmicutes	3.03979	32.6901	chromosome:NZ_CP013231.1/CP013231.1; plasmid UTSW55_1:NZ_CP013227.1/CP013227.1; plasmid UTSW55_2:NZ_CP013228.1/CP013228.1; plasmid UTSW55_3:NZ_CP013229.1/CP013229.1; plasmid UTSW55_4:NZ_CP013230.1/CP013230.1	-	5	3228	2976	3/7/16	3/5/17	Complete Genome	"UT SOUTH WESTERN MEDICAL CENTER DALLAS, UNIVERSITY OF TEXAS"	SAMN04254471	GCA_001580515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/515/GCA_001580515.1_ASM158051v1	-	UTSW MRSA 55
Staphylococcus warneri SG1	1194526	PRJNA167492	167492	Terrabacteria group	Firmicutes	2.56072	32.6547	chromosome:NC_020164.1/CP003668.1; plasmid pSZ4:NC_020165.1/CP003669.1; plasmid unnamed:NC_020274.1/CP003670.1; plasmid unnamed2:NC_020264.1/CP003671.1; plasmid unnamed3:NC_020265.1/CP003672.1; plasmid unnamed4:NC_020266.1/CP003673.1; plasmid unnamed5:NC_020267.1/CP003674.1; plasmid unnamed6:NC_020268.1/CP003675.1; plasmid unnamed7:NC_020269.1/CP003676.1	-	9	2502	2387	1/23/13	4/1/17	Complete Genome	University of Alberta	SAMN02604131	GCA_000332735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/735/GCA_000332735.1_ASM33273v1	23516183	SG1
Rickettsia peacockii str. Rustic	562019	PRJNA31309	31309	Proteobacteria	Alphaproteobacteria	1.3149	32.6422	chromosome:NC_012730.1/CP001227.1; plasmid pRPR:NC_012732.1/CP001228.1	-	2	1566	1250	5/29/09	4/21/17	Complete Genome	U of MN Entomology	SAMN02604073	GCA_000021525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/525/GCA_000021525.1_ASM2152v1	20027221	Rustic
Staphylococcus cohnii	29382	PRJNA369449	369449	Terrabacteria group	Firmicutes	2.6257	32.6311	chromosome:CP019597.1; plasmid pSC-SNUDS-2-1:CP019598.1; plasmid pSC-SNUDS-2-2:CP019599.1	-	3	2507	1876	2/8/17	2/8/17	Complete Genome	Korea Research Institute of Bioscience & Biotechnology	SAMN06286343	GCA_001990205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/205/GCA_001990205.1_ASM199020v1	-	SNUDS-2
secondary endosymbiont of Trabutina mannipara	1835721	PRJEB13573	329215	Proteobacteria	Gammaproteobacteria	0.298471	32.6	chromosome I:NZ_LT594522.1/LT594522.1	-	1	303	237	7/16/16	4/13/17	Complete Genome	Division of Microbial Ecology Department of Microbiology and Ecosystem Science University of Vienna	SAMEA3935976	GCA_900090215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/090/215/GCA_900090215.1_TRABTM	-	-
Francisella philomiragia subsp. philomiragia ATCC 25015	539329	PRJNA239335	239335	Proteobacteria	Gammaproteobacteria	2.0174	32.6	chromosome:NZ_CP010019.1/CP010019.1	-	1	1923	1817	2/6/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03218150	GCA_000833455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/455/GCA_000833455.1_ASM83345v1	25931589	O#319L
Yersinia pestis PY-11	992137	PRJNA64301	64301	Proteobacteria	Gammaproteobacteria	4.68247	47.5	-	AKRW01	616	4658	4228	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141458	GCA_000268605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/605/GCA_000268605.1_ASM26860v1	-	PY-11
Flavobacterium psychrophilum FPG101	1452725	PRJNA236036	236036	FCB group	Bacteroidetes/Chlorobi group	2.83513	32.6	chromosome:NZ_CP007206.1/CP007206.1	-	1	2539	2428	9/12/14	4/2/17	Complete Genome	"Ontario Veterinary College, University of Guelph"	SAMN03290989	GCA_000754365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/365/GCA_000754365.1_ASM75436v1	-	FPG101
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.39101	31.9	-	JUWT01	121	2326	2257	7/10/15	3/26/17	Contig	University of Washington	SAMN03197899	GCA_001073995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/995/GCA_001073995.1_ASM107399v1	26230489	695_SEPI
Bacillus cereus BAG6O-1	1053192	PRJNA70349	70349	Terrabacteria group	Firmicutes	5.89881	35.1	-	AHDM01	4	6212	5817	8/27/12	6/15/17	Scaffold	Broad Institute	SAMN02596824	GCA_000293525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/525/GCA_000293525.1_Baci_cere_BAG60-1_G13196_V1	-	BAG6O-1
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.65928	68.7	-	BDOM01	371	5440	5083	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076687	GCA_002089975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/975/GCA_002089975.1_ASM208997v1	28045086	Tone-1
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.83956	38	-	FFIX01	12	1816	1664	2/9/16	3/27/17	Scaffold	SC	SAMEA2674724	GCA_900035255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/255/GCA_900035255.1_14412_4_13	-	2842STDY5882041
Mycobacterium tuberculosis PanR0206	1344045	PRJNA207753	207753	Terrabacteria group	Actinobacteria	4.40432	65.5499	chromosome:NZ_CM002054.1/CM002054.1	ATMN01	1	4266	4077	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471113	GCA_000443345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/345/GCA_000443345.1_fedora0206b_IS	23884993	PanR0206
Rickettsia montanensis str. OSU 85-930	1105114	PRJNA75045	75045	Proteobacteria	Alphaproteobacteria	1.2798	32.6	chromosome:NC_017043.1/CP003340.1	-	1	1457	1161	3/1/12	4/17/17	Complete Genome	Los Alamos National Laboratory	SAMN02603562	GCA_000284175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/175/GCA_000284175.1_ASM28417v1	-	OSU 85-930
Streptococcus pneumoniae GA43265	760818	PRJNA48795	48795	Terrabacteria group	Firmicutes	2.12816	39.7	-	AGOB01	12	2320	2008	10/25/11	3/8/17	Contig	Institute for Genome Sciences	SAMN00792788	GCA_000232085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/085/GCA_000232085.2_ASM23208v2	-	GA43265
Helicobacter pylori GAM112Ai	1159023	PRJNA89217	89217	Proteobacteria	delta/epsilon subdivisions	1.6215	39.3	-	APCZ01	50	1594	1408	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436856	GCA_000345005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/005/GCA_000345005.2_ASM34500v2	-	GAM112Ai
Neisseria meningitidis Nm3127	1079752	PRJNA72657	72657	Proteobacteria	Betaproteobacteria	2.07878	51.8	-	AGBO01	210	2346	2042	12/29/11	3/15/17	Contig	University of Toronto	SAMN02471969	GCA_000240565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/565/GCA_000240565.2_ASM24056v2	22084315	Nm3127
Streptococcus pyogenes ABC020017526	1439028	PRJNA233119	233119	Terrabacteria group	Firmicutes	1.81745	38.6	-	JJHI01	5	1862	1729	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567468	GCA_000630825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/825/GCA_000630825.1_Stre_pyog_ABC020017526_V1	-	ABC020017526
Leptospira interrogans	173	PRJNA293766	293766	Spirochaetes	Spirochaetia	4.44132	35.2	-	LJBO01	106	4006	3521	9/16/15	4/10/17	Contig	Universidade Federal de Pelotas	SAMN04009303	GCA_001292605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/605/GCA_001292605.1_ASM129260v1	-	Prea
Bacillus anthracis	1392	PRJEB12289	314383	Terrabacteria group	Firmicutes	5.44138	35.1	-	FBXM01	47	6049	5730	3/5/16	3/28/17	Contig	ANSES	SAMEA3720264	GCA_900014335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/335/GCA_900014335.1_ANSES_118	-	-
Shigella flexneri 51575	1434151	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.28543	50.5	-	AZPD01	278	4693	4031	1/29/14	2/22/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437386	GCA_000565965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/965/GCA_000565965.1_ASM56596v1	-	51575
Pseudomonas aeruginosa PA14	652611	PRJNA38507	38507	Proteobacteria	Gammaproteobacteria	6.57708	66.1	-	ASWV01	4	6191	6025	5/31/13	3/15/17	Scaffold	Broad Institute	SAMN02596971	GCA_000404265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/265/GCA_000404265.1_Pseu_aeru_PA14_V1	-	PA14
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	3.87611	38.9	-	JSCN01	76	3767	3597	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068243	GCA_000804725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/725/GCA_000804725.1_ASM80472v1	25487793	2011GDAB3
Streptococcus agalactiae STIR-CD-27	1154855	PRJNA86369	86369	Terrabacteria group	Firmicutes	2.03079	35.3	-	ALRS01	44	2094	1979	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993658	GCA_000289235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/235/GCA_000289235.1_ASM28923v1	-	STIR-CD-27
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.23147	41.4	-	CEDJ01	98	2228	2111	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233892	GCA_000936855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/855/GCA_000936855.1_Velvet_assembly	-	LS1C
Pseudomonas syringae pv. syringae	321	PRJNA278487	278487	Proteobacteria	Gammaproteobacteria	5.77722	59	-	LAGV01	76	5210	4935	4/19/16	3/28/17	Contig	Huazhong Agricultural University	SAMN03418705	GCA_001623415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/415/GCA_001623415.1_ASM162341v1	-	MB03
Legionella pneumophila serogroup 1	66976	PRJDB1748	245464	Proteobacteria	Gammaproteobacteria	3.57515	38.3	-	BAYP01	62	3277	3105	5/10/14	3/24/17	Contig	"Department of Microbiology and Infectious disease, School of Medicine, Toho University"	SAMD00000400	GCA_000694995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/995/GCA_000694995.1_ASM69499v1	-	TUM 13947
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.0367	50.6	-	NQCJ01	170	5312	4836	8/11/17	8/15/17	Contig	JCVI	SAMN07450679	GCA_002248805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/805/GCA_002248805.1_ASM224880v1	-	ECH+04
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.55429	67	-	MUUG01	103	7135	6770	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001935	GCA_001992735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/735/GCA_001992735.1_ASM199273v1	-	VC14488
Burkholderia pseudomallei MSHR4377	1434200	PRJNA230731	230731	Proteobacteria	Betaproteobacteria	7.24546	68.1	-	JPQH01	2	7422	6868	11/11/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02943213	GCA_000774265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/265/GCA_000774265.1_BCW_17	25676747	MSHR4377
Chlamydia trachomatis	813	PRJEB2035	203744	PVC group	Chlamydiae	1.06176	41.2	-	CVNK01	12	990	920	4/21/15	3/26/17	Scaffold	SC	SAMEA1398364	GCA_001317845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/845/GCA_001317845.1_7396_3_10	-	R26833IMS
Bacillus thuringiensis serovar bolivia	371157	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.52161	35.1	-	NFEW01	53	5940	5611	5/17/17	5/24/17	Contig	Huazhong Agricultural University	SAMN05934575	GCA_002147715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/715/GCA_002147715.1_ASM214771v1	-	T63001
Vibrio cholerae O1 str. EDC-022	1095641	PRJNA76217	76217	Proteobacteria	Gammaproteobacteria	4.05046	47.5	-	APFU01	106	3885	3708	3/22/13	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00989313	GCA_000348265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/265/GCA_000348265.2_ASM34826v2	-	EDC-022
Clostridioides difficile 6057	1151316	PRJNA85807	85807	Terrabacteria group	Firmicutes	3.98678	28.2	-	AVIR01	296	3785	3495	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766563	GCA_000449885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/885/GCA_000449885.2_ASM44988v2	-	6057
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.78181	32.2	-	MRKN01	110	1841	1551	4/19/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773889	GCA_002100935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/935/GCA_002100935.1_ASM210093v1	28348839	FDC417
Brucella abortus 80/108	1160198	PRJNA173620	173620	Proteobacteria	Alphaproteobacteria	3.29597	57.2	-	AQLP01	3	3377	3158	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811163	GCA_000366365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/365/GCA_000366365.1_Bruc_abor_80_108_V1	-	80/108
Xanthomonas oryzae pv. oryzae	64187	PRJNA269479	269479	Proteobacteria	Gammaproteobacteria	4.29614	63.9	-	JXGX01	433	4272	3418	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252546	GCA_001929075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/075/GCA_001929075.1_ASM192907v1	-	IXO675
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.02476	37.9	-	MLNL01	504	2183	1836	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297077	GCA_001868715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/715/GCA_001868715.1_ASM186871v1	27118061	AWRIB446
Vibrio parahaemolyticus S153	1394686	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.06082	45.3	-	AWIA01	592	4825	4579	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02339000	GCA_000489415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/415/GCA_000489415.1_S153	-	S153
Bacillus subtilis subsp. subtilis	135461	PRJNA238336	238336	Terrabacteria group	Firmicutes	4.19752	42.9	-	JFBO01	166	4504	4104	5/16/17	6/15/17	Contig	"Wageningen University, The Netherlands"	SAMN02643342	GCA_002142535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/535/GCA_002142535.1_ASM214253v1	-	M112
Methanobrevibacter ruminantium M1	634498	PRJNA34681	34681	Euryarchaeota	Methanobacteria	2.9372	32.6	chromosome:NC_013790.1/CP001719.1	-	1	2280	2143	2/5/10	4/17/17	Complete Genome	Pastoral Greenhouse Gas Research Consortium	SAMN02603710	GCA_000024185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/185/GCA_000024185.1_ASM2418v1	20126622	M1
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.92028	28	-	LFQV01	97	3762	3576	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779987	GCA_001573555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/555/GCA_001573555.1_ASM157355v1	26939550	CDC 795
Enterococcus faecalis EnGen0092	1157350	PRJNA88201	88201	Terrabacteria group	Firmicutes	3.32362	37.2	-	AIQD01	24	3496	3316	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809001	GCA_000391185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/185/GCA_000391185.1_Ente_faec_B1719_V1	-	B1719
Streptococcus mutans N34	857131	PRJNA49801	49801	Terrabacteria group	Firmicutes	1.96203	36.8	-	AHSF01	102	1927	1828	2/11/13	3/23/17	Contig	Cornell University	SAMN02428987	GCA_000339855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/855/GCA_000339855.1_ASM33985v1	23228887	N34
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.15141	52.4	-	CQNN01	78	2518	2195	3/22/15	4/11/17	Contig	SC	SAMEA1690377	GCA_001119905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/905/GCA_001119905.1_8289_2_55	-	GCGS055
Enterococcus faecium EnGen0042	1138914	PRJNA82479	82479	Terrabacteria group	Firmicutes	2.78942	38.3	-	AHXP01	8	2811	2539	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779828	GCA_000322085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/085/GCA_000322085.1_Ente_faec_E1861_V1	-	E1861
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.93743	66.2	-	JVLE01	310	4651	4437	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197524	GCA_001072355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/355/GCA_001072355.1_ASM107235v1	26230489	334_SMAL
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.14636	41.1	-	CWFJ01	79	2093	1913	6/23/15	3/26/17	Contig	SC	SAMEA1032900	GCA_001177365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/365/GCA_001177365.1_6817_1_60	-	EQUI0013
Pasteurella multocida subsp. multocida str. Anand1_cattle	1032867	PRJNA66357	66357	Proteobacteria	Gammaproteobacteria	1.43852	40.9	-	ALBY01	3152	3598	3590	8/17/12	1/8/14	Contig	"Department of Veterinary Microbiology, College of Veterinary Science and Animal Husbandry, Anand Agricultural University, Anand, Gujarat, India"	SAMN02469639	GCA_000291645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/645/GCA_000291645.1_ASM29164v1	-	Anand1_cattle
Lactobacillus rhamnosus	47715	PRJNA267549	267549	Terrabacteria group	Firmicutes	5.8996	47.3	-	JVJA01	919	-	-	7/10/15	7/13/16	Contig	University of Washington	SAMN03197580	GCA_001063295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/295/GCA_001063295.1_ASM106329v1	26230489	389_LRHA
Brucella melitensis	29459	PRJNA278809	278809	Proteobacteria	Alphaproteobacteria	3.28962	57.2	-	LAQM01	41	3370	3137	8/10/16	4/5/17	Contig	Kuwait University	SAMN03433318	GCA_001702255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/702/255/GCA_001702255.1_ASM170225v1	-	KU/RCF-96
Francisella philomiragia	28110	PRJNA238064	238064	Proteobacteria	Gammaproteobacteria	2.04493	32.5919	chromosome:NZ_CP009343.1/CP009343.1; plasmid unnamed:NZ_CP009342.1/CP009342.1	-	2	1986	1876	2/6/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03010442	GCA_000833195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/195/GCA_000833195.1_ASM83319v1	25931589	O#319-029
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.37972	53.6	-	LSXR01	44	2310	2088	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497004	GCA_002203065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/065/GCA_002203065.1_S105	-	4727
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.50916	46.9	-	CTER01	113	4229	3998	3/26/15	3/26/17	Scaffold	SC	SAMEA980145	GCA_001218165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/165/GCA_001218165.1_4976_2_2	-	YE204/02
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.09789	60	-	FCHN01	15	4881	4717	1/21/16	3/27/17	Scaffold	SC	SAMEA2273929	GCA_001536445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/445/GCA_001536445.1_12082_2_63	-	2880STDY5682856
Lactobacillus plantarum	1590	PRJNA314790	314790	Terrabacteria group	Firmicutes	3.27849	43.6	-	LUHN01	166	3279	2937	6/9/16	3/28/17	Contig	CERELA-CONICET	SAMN04543542	GCA_001660645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/645/GCA_001660645.1_ASM166064v1	-	MPL16
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66315	31.4	-	CUKZ01	17	1712	1614	3/31/15	3/18/17	Contig	SC	SAMEA1010486	GCA_001239065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/065/GCA_001239065.1_7038_3_9	-	OXC6258
Burkholderia sp. TJI49	987057	PRJNA62545	62545	Proteobacteria	Betaproteobacteria	7.38389	66.9	-	AEXE01	2989	8985	8940	3/8/11	1/8/14	Contig	"H.E.J, Research Institute of Chemistry, International Center for Chemical and Biological Sciences, University of Karachi, Karachi, Pakistan"	SAMN02471833	GCA_000191945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/945/GCA_000191945.2_ASM19194v2	23653265	TJI49
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.50123	32.6	-	CUFC01	93	2494	2359	3/31/15	4/21/17	Scaffold	SC	SAMEA1035077	GCA_001230305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/305/GCA_001230305.1_7068_7_1	-	CN1219
Enterobacter cloacae	550	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.39149	55	-	NPGK01	139	5609	5231	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07345015	GCA_002264125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/125/GCA_002264125.1_ASM226412v1	-	EN3600
Cronobacter sakazakii	28141	PRJNA246771	246771	Proteobacteria	Gammaproteobacteria	4.62849	56.6	-	JMSS01	244	4517	3817	1/26/17	4/6/17	Scaffold	"Nottingham Trent University, UK"	SAMN02776191	GCA_001972245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/245/GCA_001972245.1_ASM197224v1	-	140
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.02734	64.2	-	FVAI01	14	5044	4918	3/10/17	3/18/17	Contig	SC	SAMEA1971044	GCA_900130305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/305/GCA_900130305.1_10625_5_62	-	147
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.00188	67.1	-	LPDP01	156	7303	6877	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449434	GCA_001528885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/885/GCA_001528885.1_ASM152888v1	-	MSMB1139WGS
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.02012	38.7	-	NGHJ01	98	3922	3728	5/16/17	5/24/17	Contig	JCVI	SAMN06892301	GCA_002143895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/895/GCA_002143895.1_ASM214389v1	-	ARLG1839
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.19289	54.7	-	LEDV02	105	5138	4855	6/9/15	3/28/17	Contig	JCVI	SAMN03732708	GCA_001022495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/495/GCA_001022495.2_ASM102249v2	-	GN02457
Klebsiella aerogenes	548	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.31472	54.9	-	NGRG01	7	5111	4870	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521923	GCA_002152895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/895/GCA_002152895.1_ASM215289v1	-	MGH174
Pseudomonas sp. GM67	1144335	PRJNA83095	83095	Proteobacteria	Gammaproteobacteria	6.50211	59.6	-	AKJH01	183	6021	5858	7/27/12	5/19/17	Contig	Oak Ridge National Lab	SAMN00839646	GCA_000282435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/435/GCA_000282435.1_GM67.fsa	23045501	GM67
Streptomyces sp. SA3_actF	682181	PRJNA49359	49359	Terrabacteria group	Actinobacteria	7.21776	73.1	-	ADXB01	1275	6627	5279	6/23/10	5/19/17	Contig	US DOE Joint Genome Institute (JGI-PGF)	SAMN02441794	GCA_000179215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/215/GCA_000179215.1_ASM17921v1	-	SA3_actF
Bacillus sp. VT 712	1848047	PRJNA315728	315728	Terrabacteria group	Firmicutes	3.92158	37.9	-	LWBK01	124	4082	3786	4/7/16	4/12/17	Contig	Institute of Human Microbiology	SAMN04569293	GCA_001614195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/195/GCA_001614195.1_ASM161419v1	-	VT 712
Acinetobacter sp. ETR1	1485002	PRJNA243840	243840	Proteobacteria	Gammaproteobacteria	4.67976	38.1	-	JICM01	151	4403	4271	6/12/14	4/6/17	Contig	California Institute of Technology	SAMN02720834	GCA_000705635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/635/GCA_000705635.1_etrbc	-	ETR1
Clostridium sp. CAG:964	1262848	PRJEB1042	206708	Terrabacteria group	Firmicutes	2.11109	40.7	-	CBFZ01	51	1896	1860	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138653	GCA_000435335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/335/GCA_000435335.1_MGS964	-	-
Sphingomonas sp. 32-66-10	1970437	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	2.68136	66	-	NCEF01	83	2755	2635	8/16/17	8/16/17	Scaffold	None	SAMN06622353	GCA_002280565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/280/565/GCA_002280565.1_ASM228056v1	-	-
Rhodococcus sp. R04	374846	PRJNA63847	63847	Terrabacteria group	Actinobacteria	8.83657	69.6	-	AFAQ01	2113	-	-	6/27/11	1/8/14	Contig	"Institute of Biotechnology, Shanxi University, China"	SAMN02469965	GCA_000219395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/395/GCA_000219395.2_ASM21939v2	21742862	R04
Enterobacter sp. 10-1	559104	PRJNA390046	390046	Proteobacteria	Gammaproteobacteria	6.09531	56.7	-	NISF01	37	5887	5573	8/25/17	8/28/17	Scaffold	Agricultural culture collection of china (ACCC)	SAMN07212159	GCA_002270295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/270/295/GCA_002270295.1_ASM227029v1	-	1-Oct
Staphylococcus sp. HMSC063F05	1715055	PRJNA296183	296183	Terrabacteria group	Firmicutes	2.41929	31.9	-	LWQB01	70	2364	2260	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498584	GCA_001837075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/075/GCA_001837075.1_ASM183707v1	-	HMSC063F05
Corynebacterium sp. NML 120412	2029401	PRJNA399534	399534	Terrabacteria group	Actinobacteria	2.59776	65.5	-	NSGL01	13	2389	2239	9/4/17	9/6/17	Scaffold	National Microbiology Laboratory/ Public Health Agency of Canada	SAMN07539811	GCA_002285155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/155/GCA_002285155.1_ASM228515v1	-	NML 120412
Streptococcus sp. 1004_SSPC	1579350	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.01229	39.2	-	JWGQ01	129	1988	1803	7/10/15	4/10/17	Contig	University of Washington	SAMN03196966	GCA_001069025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/025/GCA_001069025.1_ASM106902v1	26230489	1004_SSPC
Prevotella sp. UBA2763	1947115	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.07036	47.7	-	DEIX01	116	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06454308	GCA_002353085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/085/GCA_002353085.1_ASM235308v1	28894102	-
Mycobacterium sp. E1747	1834128	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.69414	67.4	-	LZJI01	253	5499	5060	6/17/16	4/12/17	Contig	JCVI	SAMN04634233	GCA_001667775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/775/GCA_001667775.1_ASM166777v1	-	E1747
Paenibacillus sp. cl130	1761876	PRJEB16782	350922	Terrabacteria group	Firmicutes	5.91484	45.6	-	FOYG01	26	5226	4943	11/1/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488603	GCA_900116035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/035/GCA_900116035.1_IMG-taxon_2636416069_annotated_assembly	-	CL130
Prochlorococcus sp. scB245a_519G16	1471514	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.31023	31.3	-	JFNM01	357	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671385	GCA_000635755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/755/GCA_000635755.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Prochlorococcus sp. scB245a_519O11	1471516	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.28445	31.2	-	JFNO01	238	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671387	GCA_000635775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/775/GCA_000635775.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Paenibacillus sp. 453mf	1761874	PRJEB17534	351988	Terrabacteria group	Firmicutes	5.24312	44.9	-	FPAC01	24	4920	4690	11/2/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488601	GCA_900116105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/105/GCA_900116105.1_IMG-taxon_2636416067_annotated_assembly	-	453MF
Mycobacterium sp. E3247	1856864	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.95594	68.1	-	LZJG01	571	5737	5246	6/17/16	4/13/17	Contig	JCVI	SAMN05202173	GCA_001667785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/785/GCA_001667785.1_ASM166778v1	-	E3247
Prevotella sp. UBA2762	1947114	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.51158	47.1	-	DEIY01	113	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06454307	GCA_002353125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/125/GCA_002353125.1_ASM235312v1	28894102	-
Streptococcus sp. 343_SSPC	1579342	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.02837	42.4	-	JVKU01	29	1956	1874	7/10/15	4/10/17	Contig	University of Washington	SAMN03197534	GCA_001072385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/385/GCA_001072385.1_ASM107238v1	26230489	343_SSPC
Corynebacterium sp. S1S1	1881619	PRJNA327106	327106	Terrabacteria group	Actinobacteria	2.41179	58.9	-	MKXS01	21	-	-	12/22/16	12/22/16	Contig	None	SAMN05509310	GCA_001913955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/955/GCA_001913955.1_ASM191395v1	-	-
Staphylococcus sp. HMSC063F10	1715188	PRJNA296316	296316	Terrabacteria group	Firmicutes	2.53498	33.7	-	LTPU01	73	2404	2339	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498654	GCA_001837105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/105/GCA_001837105.1_ASM183710v1	-	HMSC063F10
Enterobacter sp. NFIX45	1566252	PRJEB15686	347451	Proteobacteria	Gammaproteobacteria	4.42387	55.9	-	FMVY01	14	4273	4108	10/17/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159368	GCA_900102705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/705/GCA_900102705.1_IMG-taxon_2602042066_annotated_assembly	-	NFIX45
Rhodococcus sp. BS-15	1304954	PRJDB1068	269693	Terrabacteria group	Actinobacteria	5.50311	64.4	-	BAOX01	656	-	-	12/6/14	9/16/15	Contig	Kitami Institite of Technology	SAMD00013840	GCA_000813105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/105/GCA_000813105.1_ASM81310v1	-	BS-15
Sphingomonas sp. 28-63-12	1970434	PRJNA379596	379596	Proteobacteria	Alphaproteobacteria	3.47738	63.3	-	NCGD01	54	3385	3284	8/16/17	8/16/17	Scaffold	None	SAMN06622303	GCA_002281535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/281/535/GCA_002281535.1_ASM228153v1	-	-
Clostridium sp. CAG:91	1262845	PRJEB1032	206935	Terrabacteria group	Firmicutes	2.2063	47.5	-	CBGG01	222	1978	1961	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138654	GCA_000435355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/355/GCA_000435355.1_MGS91	-	-
Acinetobacter sp. MN12	1513354	PRJNA260337	260337	Proteobacteria	Gammaproteobacteria	4.31447	40.8	-	JROB01	107	4136	3915	10/8/14	9/21/17	Contig	"CSIR-Institute of Himalayan Bioresource Technology, Palampur and Central Arid Zone Research Institute, Jodhpur"	SAMN03020262	GCA_000764915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/915/GCA_000764915.1_Acinetobater_Genome_Assembly	25414495	MN12
Bacillus sp. NC2-31	1821260	PRJNA316553	316553	Terrabacteria group	Firmicutes	4.23528	46.3	-	LWBL02	91	4170	4030	5/16/16	4/13/17	Contig	Shandong University at Weihai	SAMN04585482	GCA_001644195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/195/GCA_001644195.2_ASM164419v2	-	NC2-31
Streptomyces sp. W007	1055352	PRJNA74679	74679	Terrabacteria group	Actinobacteria	9.05735	71.4	-	AGSW01	284	8140	7505	12/20/11	5/19/17	Contig	"Yantai Institute of Coastal Zone Research,Chinese Academy of Sciences "	SAMN02472142	GCA_000239075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/075/GCA_000239075.2_ASM23907v2	22374958	W007
Pseudomonas sp. GM74	1144336	PRJNA83097	83097	Proteobacteria	Gammaproteobacteria	6.10428	60.1	-	AKJG01	180	5619	5416	7/27/12	5/24/17	Contig	Oak Ridge National Lab	SAMN00839647	GCA_000282455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/455/GCA_000282455.1_GM74.fsa	23045501	GM74
Klebsiella aerogenes	548	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.47131	54.9	-	NGRH01	11	5253	4980	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521869	GCA_002152915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/915/GCA_002152915.1_ASM215291v1	-	UCI119
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.1646	55	-	LEDU01	61	5081	4859	6/9/15	3/26/17	Contig	JCVI	SAMN03732709	GCA_001022515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/515/GCA_001022515.1_ASM102251v1	-	GN02465
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.04322	38.9	-	NGHS01	124	3950	3733	5/16/17	5/24/17	Contig	JCVI	SAMN06892208	GCA_002144015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/015/GCA_002144015.1_ASM214401v1	-	ARLG1764
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.66108	67.3	-	LPDQ01	124	6986	6652	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449435	GCA_001528945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/945/GCA_001528945.1_ASM152894v1	-	MSMB1140WGS
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.02651	64.2	-	FVBR01	14	5045	4920	3/10/17	3/18/17	Contig	SC	SAMEA2070824	GCA_900130335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/335/GCA_900130335.1_10625_5_65	-	150
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.45764	56.8	-	MRXI01	35	4336	4118	3/23/17	3/25/17	Scaffold	FDA/CFSAN	SAMN06124500	GCA_002071755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/071/755/GCA_002071755.1_ASM207175v1	-	MOD1-H2399
Enterobacter cloacae	550	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	4.79799	55	-	NPGJ01	56	4790	4522	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07345016	GCA_002264185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/185/GCA_002264185.1_ASM226418v1	-	EN3287
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.4431	32.6	-	CUEK01	78	2380	2271	3/31/15	3/26/17	Scaffold	SC	SAMEA1035041	GCA_001230625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/625/GCA_001230625.1_7067_4_75	-	9-Aug
Burkholderia sp. JGI 001012-B17	1167738	PRJNA178043	178043	Proteobacteria	Betaproteobacteria	0.619733	56.8	-	AUSG02	52	-	-	7/17/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441459	GCA_000439005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/005/GCA_000439005.2_ASM43900v2	-	JGI 001012-B17
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64523	31.4	-	CULZ01	9	1696	1613	3/31/15	3/18/17	Contig	SC	SAMEA1010617	GCA_001239125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/125/GCA_001239125.1_7065_7_25	-	OXC6371
Lactobacillus plantarum	1590	PRJNA321944	321944	Terrabacteria group	Firmicutes	3.26306	44.3	-	LYUK01	101	3198	2981	6/15/16	3/28/17	Contig	Microbial Institue for Fermentation Industry	SAMN05162514	GCA_001662895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/895/GCA_001662895.1_ASM166289v1	-	SRCM101060
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.273	60	-	FCHR01	25	5003	4836	1/21/16	3/27/17	Scaffold	SC	SAMEA2273937	GCA_001536465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/465/GCA_001536465.1_12082_2_70	-	2880STDY5682864
Yersinia enterocolitica	630	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	4.60956	46.8	-	CTFT01	183	4453	3982	3/26/15	3/26/17	Scaffold	SC	SAMEA1486359	GCA_001218485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/485/GCA_001218485.1_8016_2_82	-	IP00178
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.45463	53.5	-	LSXW01	25	2369	2196	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497011	GCA_002203075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/075/GCA_002203075.1_S110	-	4938
Francisella philomiragia	28110	PRJNA259775	259775	Proteobacteria	Gammaproteobacteria	2.04971	32.5919	chromosome:NZ_CP009436.1/CP009436.1; plasmid pFPI_1:NZ_CP009437.1/CP009437.1	-	2	1992	1899	2/6/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03013096	GCA_000833215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/215/GCA_000833215.1_ASM83321v1	25931589	O#319-067
Brucella melitensis	29459	PRJNA278809	278809	Proteobacteria	Alphaproteobacteria	3.28958	57.2	-	LDTV01	34	3363	3141	8/10/16	4/5/17	Contig	Kuwait University	SAMN03733278	GCA_001702305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/702/305/GCA_001702305.1_ASM170230v1	-	KU/RCF-84
Lactobacillus rhamnosus	47715	PRJNA253894	253894	Terrabacteria group	Firmicutes	2.75324	46.4	-	JUIS01	1037	3057	2781	6/3/16	6/3/16	Contig	Wageningen University	SAMN03196664	GCA_001657245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/245/GCA_001657245.1_ASM165724v1	-	Lrh45
Pasteurella multocida	747	PRJNA277615	277615	Proteobacteria	Gammaproteobacteria	2.29233	40.3	-	JZXO01	8	2161	1294	1/29/16	1/29/16	Contig	Huazhong Agricultural University	SAMN03394575	GCA_001542975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/975/GCA_001542975.1_ASM154297v1	-	GX-Pm
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.1563	41.2	-	CVYJ01	91	2099	1902	6/23/15	3/26/17	Contig	SC	SAMEA1032901	GCA_001177385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/385/GCA_001177385.1_6830_4_74	-	EQUI0219
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.72154	66.4	-	JVKB01	136	4416	4284	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197553	GCA_001072535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/535/GCA_001072535.1_ASM107253v1	26230489	363_SMAL
Enterococcus faecium EnGen0024	1138915	PRJNA82481	82481	Terrabacteria group	Firmicutes	3.27637	38.3	-	AHXQ01	34	3280	2939	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779829	GCA_000322105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/105/GCA_000322105.1_Ente_faec_E1904_V1	-	E1904
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.14982	52.4	-	CQJU01	70	2510	2188	3/23/15	4/11/17	Contig	SC	SAMEA1677479	GCA_001120385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/385/GCA_001120385.1_8727_5_55	-	GCGS205
Streptococcus mutans NLML4	857129	PRJNA49805	49805	Terrabacteria group	Firmicutes	1.96863	36.7	-	AHSH01	116	1951	1857	2/11/13	3/23/17	Contig	Cornell University	SAMN02429028	GCA_000339875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/875/GCA_000339875.1_ASM33987v1	23228887	NLML4
Enterococcus faecalis EnGen0085	1157351	PRJNA88203	88203	Terrabacteria group	Firmicutes	3.32328	37.1	-	AIQE01	32	3488	3342	5/3/13	4/10/17	Scaffold	Broad Institute	SAMN00808869	GCA_000391205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/205/GCA_000391205.1_Ente_faec_B1734_V1	-	B1734
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.86408	27	-	LFPA01	209	3526	3300	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779993	GCA_001573565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/565/GCA_001573565.1_ASM157356v1	26939550	CDC KA-95B
Francisella philomiragia subsp. philomiragia ATCC 25017	484022	PRJNA27853	27853	Proteobacteria	Gammaproteobacteria	2.04971	32.5919	chromosome:NC_010336.1/CP000937.1; plasmid pFPHI01:NC_010331.1/CP000938.1	-	2	1992	1891	2/11/08	3/30/17	Complete Genome	DOE Joint Genome Institute	SAMN02598454	GCA_000019285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/285/GCA_000019285.1_ASM1928v1	-	ATCC 25017
Bacillus subtilis	1423	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.05001	43.7	-	NPDB01	73	4154	3996	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372731	GCA_002271425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/425/GCA_002271425.1_assembly-7772_v1	-	7772
Vibrio parahaemolyticus S152	1394685	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.00908	45.4	-	AWIB01	588	4760	4511	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338999	GCA_000489435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/435/GCA_000489435.1_S152	-	S152
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.97488	38	-	MLNN01	518	2121	1741	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297079	GCA_001868785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/785/GCA_001868785.1_ASM186878v1	27118061	AWRIB454
Xanthomonas oryzae pv. oryzae	64187	PRJNA269480	269480	Proteobacteria	Gammaproteobacteria	4.37155	63.8	-	JXGY01	474	4379	3493	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252549	GCA_001929085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/085/GCA_001929085.1_ASM192908v1	-	IXO685
Brucella abortus 85/140	1160187	PRJNA173596	173596	Proteobacteria	Alphaproteobacteria	3.28118	57.2	-	AQLQ01	7	3366	3140	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811164	GCA_000366385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/385/GCA_000366385.1_Bruc_abor_85_140_V1	-	85/140
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.78568	32.2	-	MRKL01	117	1840	1549	4/19/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773891	GCA_002100945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/945/GCA_002100945.1_ASM210094v1	28348839	FDC419
Clostridioides difficile DA00044	1151317	PRJNA85809	85809	Terrabacteria group	Firmicutes	4.05968	28.5	-	AVIS01	143	3774	3605	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766631	GCA_000449905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/905/GCA_000449905.2_ASM44990v2	-	DA00044
Vibrio cholerae O1 str. EM-1536	1095646	PRJNA76227	76227	Proteobacteria	Gammaproteobacteria	4.05358	47.5	-	APFV01	100	3886	3721	3/22/13	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00989284	GCA_000348285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/285/GCA_000348285.2_ASM34828v2	-	EM-1536
Bacillus thuringiensis serovar aizawai	1433	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.85207	34.8	-	NFEV01	244	7305	6767	5/17/17	6/16/17	Contig	Huazhong Agricultural University	SAMN05934573	GCA_002147725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/725/GCA_002147725.1_ASM214772v1	-	T07183
Chlamydia trachomatis	813	PRJEB2035	203744	PVC group	Chlamydiae	1.06153	41.2	-	CVNT01	13	993	926	4/22/15	3/27/17	Scaffold	SC	SAMEA1398254	GCA_001398135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/135/GCA_001398135.1_7501_6_52	-	R27091extract
Burkholderia pseudomallei MSHR4300	1434194	PRJNA230723	230723	Proteobacteria	Betaproteobacteria	7.35679	68	-	JPQI01	2	7562	6984	11/11/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02943332	GCA_000774275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/275/GCA_000774275.1_BCW_11	25676747	MSHR4300
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.89357	66.9	-	MUUH01	127	7449	7047	2/10/17	3/30/17	Contig	University of British Columbia	SAMN05001936	GCA_001992755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/755/GCA_001992755.1_ASM199275v1	-	VC15200
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.884	50.8	-	NQCN01	140	5182	4670	8/11/17	8/15/17	Contig	JCVI	SAMN07450675	GCA_002248855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/855/GCA_002248855.1_ASM224885v1	-	ECH+08
Legionella pneumophila serogroup 1	66976	PRJDB1750	245465	Proteobacteria	Gammaproteobacteria	3.42237	38.2	-	BAYQ01	79	3115	2957	5/10/14	3/24/17	Contig	"Department of Microbiology and Infectious disease, School of Medicine, Toho University"	SAMD00000401	GCA_000695015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/015/GCA_000695015.1_ASM69501v1	-	TUM 13948
Pseudomonas syringae pv. syringae	321	PRJNA323624	323624	Proteobacteria	Gammaproteobacteria	5.94488	59.1	-	LYUO01	97	5266	4943	6/22/16	3/28/17	Contig	Russian Research Institute of Phytopathology	SAMN05182240	GCA_001675375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/375/GCA_001675375.1_2507	-	2507
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.09594	41.3	-	CELX01	65	2102	1960	2/24/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233958	GCA_000936915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/915/GCA_000936915.1_Velvet_assembly	-	LS9J
Streptococcus agalactiae STIR-CD-28	1154856	PRJNA86371	86371	Terrabacteria group	Firmicutes	2.03496	35.3	-	ALRT01	41	2093	1975	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993773	GCA_000289255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/255/GCA_000289255.1_ASM28925v1	-	STIR-CD-28
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	3.86483	39	-	JSCK01	57	3720	3567	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068196	GCA_000804735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/735/GCA_000804735.1_ASM80473v1	25487793	2003BJAB12
Pseudomonas aeruginosa MSH-10	1331059	PRJNA201849	201849	Proteobacteria	Gammaproteobacteria	6.49744	66.3	-	ASWW01	2	6149	5992	5/31/13	3/15/17	Scaffold	Broad Institute	SAMN02596972	GCA_000407905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/905/GCA_000407905.1_Pseu_aeru_MSH-10_V1	-	MSH-10
Shigella flexneri 51576	1434152	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.36584	50.6	-	AZPE01	272	4871	4048	1/29/14	3/5/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437387	GCA_000565985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/985/GCA_000565985.1_ASM56598v1	-	51576
Bacillus anthracis	1392	PRJEB12289	314383	Terrabacteria group	Firmicutes	5.44213	35.1	-	FBXL01	49	6061	5735	3/5/16	3/28/17	Contig	ANSES	SAMEA3720265	GCA_900014345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/345/GCA_900014345.1_ANSES_122	-	-
Leptospira interrogans	173	PRJNA293764	293764	Spirochaetes	Spirochaetia	4.43686	35.1	-	LJBP01	89	3999	3520	-	-	Contig	Universidade Federal de Pelotas	SAMN04009307	GCA_001292615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/615/GCA_001292615.1_ASM129261v1	-	RCA
Streptococcus pyogenes ABC020014925	1439013	PRJNA233116	233116	Terrabacteria group	Firmicutes	1.86475	38.5	-	JJHJ01	5	1935	1809	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567465	GCA_000630845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/845/GCA_000630845.1_Stre_pyog_ABC020014925_V1	-	ABC020014925
Neisseria meningitidis Nm2732	1079753	PRJNA72659	72659	Proteobacteria	Betaproteobacteria	2.16496	51.4	-	AGBP01	229	2489	2134	12/29/11	3/21/17	Contig	University of Toronto	SAMN02471962	GCA_000240585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/585/GCA_000240585.2_ASM24058v2	22084315	Nm2732
Helicobacter pylori GAM114Ai	1159024	PRJNA89219	89219	Proteobacteria	delta/epsilon subdivisions	1.6179	39.3	-	APDA01	30	1588	1421	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436857	GCA_000345025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/025/GCA_000345025.2_ASM34502v2	-	GAM114Ai
Streptococcus pneumoniae GA44452	760825	PRJNA48839	48839	Terrabacteria group	Firmicutes	2.15013	39.6	-	AGOC01	12	2346	2034	10/25/11	3/8/17	Contig	Institute for Genome Sciences	SAMN00792795	GCA_000232105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/105/GCA_000232105.2_ASM23210v2	-	GA44452
Rickettsia felis URRWXCal2	315456	PRJNA13884	13884	Proteobacteria	Alphaproteobacteria	1.58724	32.5609	chromosome:NC_007109.1/CP000053.1; plasmid pRF:NC_007110.1/CP000054.1; plasmid pRFdelta:NC_007111.1/CP000055.1	-	3	1704	1363	6/7/05	4/6/17	Complete Genome	CNRS	SAMN02603143	GCA_000012145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/145/GCA_000012145.1_ASM1214v1	15984913	URRWXCal2; California 2
Mycobacterium tuberculosis PanR0208	1344047	PRJNA207755	207755	Terrabacteria group	Actinobacteria	4.39399	65.3489	chromosome:NZ_CM002055.1/CM002055.1	ATMO01	1	4299	4056	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471064	GCA_000443365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/365/GCA_000443365.1_fedora0208e_IS	23884993	PanR0208
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.82847	37.9	-	FFIZ01	19	1843	1703	2/9/16	3/27/17	Scaffold	SC	SAMEA2674737	GCA_900035265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/265/GCA_900035265.1_14412_4_20	-	2842STDY5882048
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.23211	69.1	-	BDON01	262	4967	4662	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076688	GCA_002089995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/089/995/GCA_002089995.1_ASM208999v1	28045086	Tone-5
Bacillus cereus BAG6O-2	1053193	PRJNA70351	70351	Terrabacteria group	Firmicutes	5.74723	35.3	-	AHDN01	9	6101	5642	8/27/12	6/15/17	Scaffold	Broad Institute	SAMN02596825	GCA_000293545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/545/GCA_000293545.1_Baci_cere_BAG60-2_G13207_V1	-	BAG6O-2
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.4847	31.8	-	JUWI01	170	2428	2338	7/10/15	3/26/17	Contig	University of Washington	SAMN03197910	GCA_001074005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/005/GCA_001074005.1_ASM107400v1	26230489	705_SEPI
Staphylococcus sciuri	1296	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.8538	32.5088	chromosome:NZ_CP022046.1/CP022046.1; plasmid unnamed1:NZ_CP022047.1/CP022047.1	-	2	2813	2703	6/27/17	6/29/17	Complete Genome	US Food and Drug Administration 	SAMN06173298	GCA_002209165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/165/GCA_002209165.1_ASM220916v1	-	FDAARGOS_285
Yersinia pestis PY-12	992138	PRJNA64303	64303	Proteobacteria	Gammaproteobacteria	4.8276	47.4	-	AKRX01	491	4727	4360	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141459	GCA_000268625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/625/GCA_000268625.1_ASM26862v1	-	PY-12
Rickettsia sp. MEAM1 (Bemisia tabaci)	1182263	PRJNA312470	312470	Proteobacteria	Alphaproteobacteria	1.37862	32.5	chromosome:NZ_CP016305.1/CP016305.1	-	1	1509	1237	9/5/17	9/7/17	Complete Genome	Cornell University	SAMN05292331	GCA_002285905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/905/GCA_002285905.1_ASM228590v1	-	MEAM1
Staphylococcus sciuri	1296	PRJNA379758	379758	Terrabacteria group	Firmicutes	2.67345	32.5	chromosome:CP020377.1	-	1	2700	2161	3/27/17	3/27/17	Complete Genome	Korea Research Institute of Bioscience & Biotechnology	SAMN06619776	GCA_002072755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/755/GCA_002072755.1_ASM207275v1	-	SNUDS-18
Francisella tularensis subsp. novicida D9876	1450527	PRJNA235892	235892	Proteobacteria	Gammaproteobacteria	1.87021	32.5	chromosome:NZ_CP009607.1/CP009607.1	-	1	1811	1711	2/6/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03092276	GCA_000833355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/355/GCA_000833355.1_ASM83335v1	25931589	D9876
Francisella tularensis subsp. novicida U112	401614	PRJNA236529	236529	Proteobacteria	Gammaproteobacteria	1.91059	32.5	chromosome:NZ_CP009633.1/CP009633.1	-	1	1846	1744	2/6/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03107387	GCA_000833375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/375/GCA_000833375.1_ASM83337v1	25931589	U112
Rickettsia rickettsii str. R	1338411	PRJNA205162	205162	Proteobacteria	Alphaproteobacteria	1.257	32.5	chromosome:NZ_CP006009.1/CP006009.1	-	1	1521	1248	2/3/15	4/3/17	Complete Genome	Rocky Mountain Laboratories	SAMN03324097	GCA_000831525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/525/GCA_000831525.1_ASM83152v1	-	R
Rickettsia rickettsii str. Morgan	1337396	PRJNA205204	205204	Proteobacteria	Alphaproteobacteria	1.26981	32.5	chromosome:NZ_CP006010.1/CP006010.1	-	1	1540	1260	2/3/15	4/3/17	Complete Genome	Rocky Mountain Laboratories	SAMN03324096	GCA_000831545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/545/GCA_000831545.1_ASM83154v1	-	Morgan
Yersinia pestis PY-15	992141	PRJNA64309	64309	Proteobacteria	Gammaproteobacteria	4.75344	47.5	-	AKSA01	503	4621	4274	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141462	GCA_000268645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/645/GCA_000268645.1_ASM26864v1	-	PY-15
Flavobacterium psychrophilum	96345	PRJNA245044	245044	FCB group	Bacteroidetes/Chlorobi group	2.90074	32.5	chromosome:NZ_CP007627.1/CP007627.1	-	1	2595	2474	8/14/14	4/2/17	Complete Genome	"Igenbio, Inc"	SAMN02770278	GCA_000739395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/395/GCA_000739395.1_ASM73939v1	25237017	CSF259-93
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.44865	31.9	-	JUVC01	158	2388	2273	7/10/15	3/26/17	Contig	University of Washington	SAMN03197942	GCA_001074105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/105/GCA_001074105.1_ASM107410v1	26230489	737_SEPI
Bacillus cereus BAG6X1-1	1053194	PRJNA70353	70353	Terrabacteria group	Firmicutes	5.52723	35.3	-	AHDO01	5	5998	5555	8/27/12	6/15/17	Scaffold	Broad Institute	SAMN02596826	GCA_000293565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/565/GCA_000293565.1_Baci_cere_BAG6X1-1_G13210_V1	-	BAG6X1-1
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.81164	68.7	-	BDOO01	434	5541	5135	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076678	GCA_002090015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/015/GCA_002090015.1_ASM209001v1	28045086	Tone-6
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.96702	38.3	-	FFJB01	36	2042	1884	2/9/16	3/27/17	Scaffold	SC	SAMEA2674741	GCA_900035275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/275/GCA_900035275.1_14412_4_24	-	2842STDY5882052
Mycobacterium tuberculosis PanR0209	1344048	PRJNA207756	207756	Terrabacteria group	Actinobacteria	4.40813	65.5499	chromosome:NZ_CM002057.1/CM002057.1	ATMP01	1	4274	4079	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471079	GCA_000443405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/405/GCA_000443405.1_fedora0209_IS	23884993	PanR0209
Candidatus Kinetoplastibacterium blastocrithidii TCC012E	1208922	PRJNA169070	169070	Proteobacteria	Betaproteobacteria	0.820029	32.5	chromosome:NC_020285.1/CP003807.1	-	1	788	727	2/19/13	4/8/17	Complete Genome	VCU	SAMN02641646	GCA_000340925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/925/GCA_000340925.1_ASM34092v1	23345457	TCC012E
Streptococcus pneumoniae GA49138	760851	PRJNA48893	48893	Terrabacteria group	Firmicutes	2.11037	39.8	-	AGOD01	12	2310	2002	10/25/11	3/8/17	Contig	Institute for Genome Sciences	SAMN00792682	GCA_000232125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/125/GCA_000232125.2_ASM23212v2	-	GA49138
Helicobacter pylori GAM115Ai	1159025	PRJNA89221	89221	Proteobacteria	delta/epsilon subdivisions	1.68001	39.1	-	APDB01	57	1666	1506	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436792	GCA_000345045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/045/GCA_000345045.2_ASM34504v2	-	GAM115Ai
Neisseria meningitidis Nm6938	1079754	PRJNA72661	72661	Proteobacteria	Betaproteobacteria	2.17484	51.4	-	AGBQ01	193	2485	2141	12/29/11	3/21/17	Contig	University of Toronto	SAMN02471964	GCA_000240605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/605/GCA_000240605.2_ASM24060v2	22084315	Nm6938
Streptococcus pyogenes ABC020014897	1439012	PRJNA233115	233115	Terrabacteria group	Firmicutes	1.87345	38.6	-	JJHK01	7	1931	1812	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567464	GCA_000630865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/865/GCA_000630865.1_Stre_pyog_ABC020014897_V1	-	ABC020014897
Leptospira interrogans serovar Canicola	211880	PRJNA287446	287446	Spirochaetes	Spirochaetia	4.74427	35	-	LIIY02	47	4329	3834	10/26/15	4/10/17	Contig	School of Veterinary Medicine and Animal Science / University of Sao Paulo	SAMN03783264	GCA_001412475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/475/GCA_001412475.2_ASM141247v2	-	LO-4
Bacillus anthracis	1392	PRJEB12289	314383	Terrabacteria group	Firmicutes	5.44	35.1	-	FBXR01	47	6049	5743	3/5/16	3/28/17	Contig	ANSES	SAMEA3720266	GCA_900014355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/355/GCA_900014355.1_ANSES_32	-	-
Shigella flexneri 51577	1434153	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.254	50.8	-	AZPF01	245	4676	3958	1/29/14	2/22/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437388	GCA_000566005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/005/GCA_000566005.1_ASM56600v1	-	51577
Pseudomonas aeruginosa PAK	1009714	PRJNA66135	66135	Proteobacteria	Gammaproteobacteria	6.40883	66.4	-	ASWU01	1	6038	5884	5/31/13	3/15/17	Scaffold	University of Texas at Austin	SAMN02596970	GCA_000408865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/865/GCA_000408865.1_Pseu_aeru_PAK_V1	-	PAK
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	3.84404	39	-	JSCL01	61	3702	3541	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068197	GCA_000804745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/745/GCA_000804745.1_ASM80474v1	25487793	2004BJAB13
Streptococcus agalactiae LMG 14608	1154858	PRJNA86375	86375	Terrabacteria group	Firmicutes	2.07534	35.4	-	ALRU01	141	2203	1953	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993347	GCA_000289275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/275/GCA_000289275.1_ASM28927v1	-	LMG 14608
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.12026	41.1	-	CEJL01	183	2144	2004	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233962	GCA_000936955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/955/GCA_000936955.1_Velvet_assembly	-	LS9V
Pseudomonas syringae pv. syringae	321	PRJNA323624	323624	Proteobacteria	Gammaproteobacteria	5.76888	59.2	-	LYUP01	91	5108	4797	6/22/16	3/28/17	Contig	Russian Research Institute of Phytopathology	SAMN05182452	GCA_001675415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/415/GCA_001675415.1_1845	-	1845
Legionella pneumophila	446	PRJDB1721	248949	Proteobacteria	Gammaproteobacteria	3.36346	38.2	-	BAZA01	426	3082	2902	5/30/14	3/24/17	Contig	Aichi University of Education	SAMD00010899	GCA_000699225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/225/GCA_000699225.1_lp04_1.0	24948769	Nagoya-1
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.91519	50.6	-	NQDB01	124	5191	4836	8/11/17	8/15/17	Contig	JCVI	SAMN07450599	GCA_002248925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/925/GCA_002248925.1_ASM224892v1	-	ECFood+02
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.81231	67	-	MUUK01	214	7514	7050	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001941	GCA_001992765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/765/GCA_001992765.1_ASM199276v1	-	VC7576
Burkholderia pseudomallei MSHR4503	1434206	PRJNA230740	230740	Proteobacteria	Betaproteobacteria	7.31165	67.9	-	JPQN01	2	7553	6937	11/11/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02943486	GCA_000774325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/325/GCA_000774325.1_BCW_22	25676747	MSHR4503
Chlamydia trachomatis	813	PRJEB2035	203744	PVC group	Chlamydiae	1.06216	41.2	-	CVNS01	15	988	924	4/22/15	3/27/17	Scaffold	SC	SAMEA1398265	GCA_001398175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/175/GCA_001398175.1_7501_6_51	-	R28017extract
Bacillus thuringiensis serovar pahangi	1042873	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.66579	35.2	-	NFEY01	62	6078	5755	5/17/17	5/24/17	Contig	Huazhong Agricultural University	SAMN05934577	GCA_002147745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/745/GCA_002147745.1_ASM214774v1	-	T69001
Vibrio cholerae O1 str. EM-1546	1095647	PRJNA76229	76229	Proteobacteria	Gammaproteobacteria	4.06161	47.5	-	APFW01	90	3883	3723	3/22/13	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00989302	GCA_000348305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/305/GCA_000348305.2_ASM34830v2	-	EM-1546
Clostridioides difficile DA00062	1151318	PRJNA85811	85811	Terrabacteria group	Firmicutes	4.0667	28.4	-	AVIT01	158	3812	3594	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766632	GCA_000449925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/925/GCA_000449925.2_ASM44992v2	-	DA00062
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.78621	32.2	-	MRKO01	106	1842	1538	4/19/17	8/21/17	Contig	FOI Swedish Defence Research Agency	SAMN03773888	GCA_002100955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/955/GCA_002100955.1_ASM210095v1	28348839	FDC416
Brucella abortus 863/67	1160193	PRJNA173615	173615	Proteobacteria	Alphaproteobacteria	3.28416	57.2	-	AQLR01	6	3375	3155	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811166	GCA_000366405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/405/GCA_000366405.1_Bruc_abor_863_67_V1	-	863/67
Xanthomonas oryzae pv. oryzae	64187	PRJNA269481	269481	Proteobacteria	Gammaproteobacteria	4.31381	63.9	-	JXGZ01	459	4287	3465	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252585	GCA_001929095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/095/GCA_001929095.1_ASM192909v1	-	IXO704
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.86338	38	-	MLNM01	213	1905	1695	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297078	GCA_001868805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/805/GCA_001868805.1_ASM186880v1	27118061	AWRIB447
Vibrio parahaemolyticus S151	1394684	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.06061	45.3	-	AWIC01	588	4809	4583	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338998	GCA_000489455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/455/GCA_000489455.1_S151	-	S151
Bacillus subtilis	1423	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.02714	43.7	-	NPCP01	65	4145	3997	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372718	GCA_002272375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/375/GCA_002272375.1_assembly-7706_v1	-	7706
Halobacteroides halobius DSM 5150	748449	PRJNA46811	46811	Terrabacteria group	Firmicutes	2.64926	32.5	chromosome:NC_019978.1/CP003359.1	-	1	2588	2454	12/28/12	4/17/17	Complete Genome	JGI	SAMN02261360	GCA_000328625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/625/GCA_000328625.1_ASM32862v1	-	DSM 5150
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.76655	27.1	-	LFPB01	82	3409	3271	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779994	GCA_001573585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/585/GCA_001573585.1_ASM157358v1	26939550	L-572
Enterococcus faecalis EnGen0111	1157352	PRJNA88205	88205	Terrabacteria group	Firmicutes	3.29857	37.2	-	AIQF01	36	3462	3291	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808880	GCA_000391225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/225/GCA_000391225.1_Ente_faec_B1843_V1	-	B1843
Streptococcus mutans NLML5	857128	PRJNA49807	49807	Terrabacteria group	Firmicutes	1.94139	36.8	-	AHSI01	105	1899	1800	2/11/13	3/23/17	Contig	Cornell University	SAMN02428932	GCA_000339895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/895/GCA_000339895.1_ASM33989v1	23228887	NLML5
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14557	52.4	-	CQJK01	76	2511	2185	3/23/15	4/11/17	Contig	SC	SAMEA1690318	GCA_001121745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/745/GCA_001121745.1_8289_2_76	-	GCGS076
Enterococcus faecium EnGen0033	1138916	PRJNA82483	82483	Terrabacteria group	Firmicutes	2.91579	38.2	-	AHXR01	7	2984	2729	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779830	GCA_000322125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/125/GCA_000322125.1_Ente_faec_E1972_V1	-	E1972
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.99563	66.2	-	JVJR01	162	4673	4494	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197563	GCA_001072635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/635/GCA_001072635.1_ASM107263v1	26230489	372_SMAL
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12885	41.2	-	CVYT01	77	2069	1874	6/23/15	3/26/17	Contig	SC	SAMEA1032903	GCA_001177405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/405/GCA_001177405.1_6830_4_88	-	EQUI0233
Pasteurella multocida	747	PRJNA339918	339918	Proteobacteria	Gammaproteobacteria	2.54393	40.2	-	MEDF01	67	2563	1879	9/13/16	9/13/16	Contig	Madurai kamaraj university	SAMN05717776	GCA_001723955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/955/GCA_001723955.1_ASM172395v1	-	NIVEDI/PMS-1
Lactobacillus rhamnosus	47715	PRJNA357881	357881	Terrabacteria group	Firmicutes	2.87274	46.6	-	MSTB01	72	2871	2094	2/1/17	2/1/17	Contig	University of North Carolina at Chapel Hill	SAMN06161581	GCA_001982425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/425/GCA_001982425.1_ASM198242v1	-	AMC143
Brucella melitensis	29459	PRJNA278809	278809	Proteobacteria	Alphaproteobacteria	3.2892	57.2	-	LDTX01	49	3364	3141	8/10/16	4/5/17	Contig	Kuwait University	SAMN03733280	GCA_001702315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/702/315/GCA_001702315.1_ASM170231v1	-	KU/RCF-31
Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonas culicis)	1208923	PRJNA168261	168261	Proteobacteria	Betaproteobacteria	0.820037	32.5	chromosome:NC_019814.1/CP003733.1	-	1	788	728	12/11/12	4/8/17	Complete Genome	LNCC	SAMN02641518	GCA_000319245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/245/GCA_000319245.1_ASM31924v1	23560078	-
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.31323	53.4	-	LSXX01	19	2223	2068	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496986	GCA_002203105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/105/GCA_002203105.1_S111	-	2789
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.44649	47	-	CTFS01	105	4156	3927	3/26/15	3/26/17	Scaffold	SC	SAMEA980210	GCA_001218525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/525/GCA_001218525.1_5116_2_6	-	YE238/02
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.33966	59.9	-	FCFX01	27	5133	4937	1/21/16	3/27/17	Scaffold	SC	SAMEA2273888	GCA_001536485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/485/GCA_001536485.1_12082_2_24	-	2880STDY5682815
Lactobacillus plantarum	1590	PRJNA325089	325089	Terrabacteria group	Firmicutes	3.30368	44.4	-	LZXZ01	33	3222	3037	6/22/16	3/28/17	Contig	CERELA-CONICET	SAMN05219309	GCA_001675425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/425/GCA_001675425.1_ASM167542v1	24459463	TL2766
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.734	31.3	-	CUON01	17	1817	1714	3/31/15	3/18/17	Contig	SC	SAMEA1010362	GCA_001239285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/285/GCA_001239285.1_7065_7_86	-	OXC6434
Burkholderia sp. JGI 001009-G21	1167737	PRJNA175207	175207	Proteobacteria	Betaproteobacteria	0.456139	59.9	-	AUNM02	46	-	-	7/16/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441465	GCA_000463695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/695/GCA_000463695.2_ASM46369v2	-	JGI 001009-G21
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.54521	32.7	-	CUGR01	101	2524	2394	3/31/15	3/26/17	Scaffold	SC	SAMEA1035106	GCA_001231025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/025/GCA_001231025.1_7068_7_49	-	124304
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.55928	56.7	-	MRXM01	42	4455	4229	3/23/17	3/25/17	Scaffold	FDA/CFSAN	SAMN06124518	GCA_002071765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/071/765/GCA_002071765.1_ASM207176v1	-	MOD1-H322
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.02513	64.2	-	FVBC01	12	5046	4920	3/10/17	3/18/17	Contig	SC	SAMEA2071248	GCA_900130345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/345/GCA_900130345.1_10625_5_66	-	151
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.52569	67.3	-	LPDR01	73	6860	6515	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449436	GCA_001528965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/965/GCA_001528965.1_ASM152896v1	-	MSMB1145WGS
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.98615	38.6	-	NGHT01	88	3867	3684	5/16/17	5/24/17	Contig	JCVI	SAMN06892207	GCA_002144035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/035/GCA_002144035.1_ASM214403v1	-	ARLG1768
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.03874	55.3	-	LEDS01	66	4973	4767	6/9/15	3/26/17	Contig	JCVI	SAMN03732711	GCA_001022545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/545/GCA_001022545.1_ASM102254v1	-	GN02486
Klebsiella aerogenes	548	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.2491	55	-	NGRI01	4	5090	4843	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521870	GCA_002152925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/925/GCA_002152925.1_ASM215292v1	-	UCI120
Pseudomonas sp. GM78	1144337	PRJNA83099	83099	Proteobacteria	Gammaproteobacteria	7.28756	60.2	-	AKJF01	235	6740	6483	7/27/12	5/28/17	Contig	Oak Ridge National Lab	SAMN00839648	GCA_000282475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/475/GCA_000282475.1_GM78.fsa	23045501	GM78
Streptomyces sp. TOR3209	1073567	PRJNA71265	71265	Terrabacteria group	Actinobacteria	8.01337	72.6	-	AGNH01	729	7504	6694	12/5/11	5/19/17	Contig	Institute of Genetics and Physiology?Hebei Academy of Agriculture and Forestry Sciences	SAMN02469879	GCA_000259895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/895/GCA_000259895.1_ASM25989v1	22374957	TOR3209
Bacillus sp. MKU004	1849370	PRJNA316671	316671	Terrabacteria group	Firmicutes	4.50063	44.4	-	LXUH01	159	4392	4274	6/3/16	4/12/17	Contig	Madurai Kamaraj University	SAMN04589240	GCA_001655735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/735/GCA_001655735.1_ASM165573v1	-	MKU004
Acinetobacter sp. HR7	1509403	PRJNA252639	252639	Proteobacteria	Gammaproteobacteria	3.12343	43.5	-	JPQO01	227	3029	2844	11/10/14	4/6/17	Contig	KRIBB	SAMN02866030	GCA_000773685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/685/GCA_000773685.1_ASM77368v1	25573931	HR7
Clostridium sp. CAG:798	1262841	PRJEB1011	206838	Terrabacteria group	Firmicutes	1.30383	27.5	-	CBGO01	18	1302	1270	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138655	GCA_000435375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/375/GCA_000435375.1_MGS798	-	-
Sphingomonas sp. UBA1000	1947531	PRJNA348753	348753	Proteobacteria	Alphaproteobacteria	2.4602	67.2	-	DBAW01	282	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457503	GCA_002291855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/855/GCA_002291855.1_ASM229185v1	28894102	-
Rhodococcus sp. IITR03	1561224	PRJNA263866	263866	Terrabacteria group	Actinobacteria	6.2895	67.3	-	LATQ01	657	6123	2676	6/2/15	6/12/16	Contig	CSIR-Indian Institute of Toxicology Research	SAMN03107812	GCA_001017865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/865/GCA_001017865.1_ASM101786v1	-	IITR03
Enterobacter sp. NFIX58	1566251	PRJEB16958	351081	Proteobacteria	Gammaproteobacteria	4.86371	55.9	-	FODW01	15	4745	4560	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159286	GCA_900110475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/475/GCA_900110475.1_IMG-taxon_2602042067_annotated_assembly	-	NFIX58
Staphylococcus sp. HMSC063H12	1715212	PRJNA296341	296341	Terrabacteria group	Firmicutes	2.79905	32.7	-	LTPT01	86	2900	2726	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498668	GCA_001837115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/115/GCA_001837115.1_ASM183711v1	-	HMSC063H12
Corynebacterium sp. S5S1	1881620	PRJNA327106	327106	Terrabacteria group	Actinobacteria	2.5756	59.2	-	MKXT01	97	-	-	12/22/16	12/22/16	Scaffold	None	SAMN05509318	GCA_001913985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/985/GCA_001913985.1_ASM191398v1	-	-
Streptococcus sp. X13SY08	1676616	PRJNA288357	288357	Terrabacteria group	Firmicutes	1.54862	40.7	-	LFYO02	5	1602	1230	7/20/15	4/11/17	Contig	Fujian Academy of Agricultural Sciences	SAMN03798557	GCA_001182825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/825/GCA_001182825.2_ASM118282v2	26744370	X13SY08
Prevotella sp. UBA2758	1947113	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.75272	49	-	DEJC01	120	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06453250	GCA_002353195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/195/GCA_002353195.1_ASM235319v1	28894102	-
Mycobacterium sp. E3078	1834141	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.68829	67.5	-	LZJV01	164	5321	5053	6/17/16	4/12/17	Contig	JCVI	SAMN04634220	GCA_001667835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/835/GCA_001667835.1_ASM166783v1	-	E3078
Paenibacillus sp. UNCCL117	1502764	PRJEB17759	353208	Terrabacteria group	Firmicutes	7.26788	54.8	-	FPIU01	57	6091	5864	11/12/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02799630	GCA_900119055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/055/GCA_900119055.1_IMG-taxon_2593339198_annotated_assembly	-	UNCCL117
Prochlorococcus sp. scB245a_520E22	1471520	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.13682	31.2	-	JFNS01	338	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671391	GCA_000635795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/795/GCA_000635795.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Prochlorococcus sp. scB245a_520F22	1471521	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.3537	31.5	-	JFNT01	245	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671392	GCA_000635815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/815/GCA_000635815.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Paenibacillus sp. ov031	1761879	PRJEB18423	355821	Terrabacteria group	Firmicutes	6.87569	46.1	-	FRDO01	17	6092	5923	12/3/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487896	GCA_900143165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/165/GCA_900143165.1_IMG-taxon_2616644976_annotated_assembly	-	OV031
Mycobacterium sp. E3121	1834142	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.79234	67.4	-	LZJP01	134	5347	5155	6/17/16	4/13/17	Contig	JCVI	SAMN04634226	GCA_001667865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/865/GCA_001667865.1_ASM166786v1	-	E3121
Prevotella sp. UBA2756	1947112	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.90153	54.4	-	DEJE01	63	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06453239	GCA_002353205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/205/GCA_002353205.1_ASM235320v1	28894102	-
Streptococcus sp. FDAARGOS_146	1702171	PRJNA231221	231221	Terrabacteria group	Firmicutes	1.93023	38.1	-	LOSA01	1	1903	1726	12/21/15	4/11/17	Contig	US Food and Drug Administration 	SAMN03996291	GCA_001471735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/735/GCA_001471735.1_ASM147173v1	-	FDAARGOS_146
Staphylococcus sp. HMSC064A09	1715133	PRJNA296261	296261	Terrabacteria group	Firmicutes	2.5394	33.6	-	LTPR01	52	2408	2333	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498631	GCA_001837145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/145/GCA_001837145.1_ASM183714v1	-	HMSC064A09
Enterobacter sp. NFIX09	1566253	PRJEB17057	351172	Proteobacteria	Gammaproteobacteria	5.48335	54	-	FOHP01	14	5231	5029	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159294	GCA_900111655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/655/GCA_900111655.1_IMG-taxon_2602042046_annotated_assembly	-	NFIX09
Rhodococcus sp. JCM 9791	1298611	PRJDB887	245942	Terrabacteria group	Actinobacteria	6.33932	65.3	-	BBEG01	947	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016835	GCA_001312645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/645/GCA_001312645.1_ASM131264v1	-	JCM 9791
Clostridium sp. CAG:242	1262783	PRJEB782	206675	Terrabacteria group	Firmicutes	2.56712	45.2	-	CBCM01	150	2472	2433	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138659	GCA_000435455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/455/GCA_000435455.1_MGS242	-	-
Acinetobacter sp. ZOR0008	1339229	PRJNA205573	205573	Proteobacteria	Gammaproteobacteria	4.12721	38.6	-	JRKA01	169	4015	3815	12/11/14	4/6/17	Contig	University of Oregon	SAMN03021523	GCA_000800865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/865/GCA_000800865.1_ZOR0008.1	-	ZOR0008
Bacillus sp. SM1	429004	PRJNA319764	319764	Terrabacteria group	Firmicutes	1.76949	34.6	-	LXJX01	29	1801	1624	6/3/16	4/17/17	Contig	Tripura University	SAMN04904294	GCA_001657555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/555/GCA_001657555.1_ASM165755v1	-	SM1
Streptomyces sp. AA1529	1203257	PRJNA169173	169173	Terrabacteria group	Actinobacteria	7.28598	72.7	-	ALAP01	109	6308	5935	7/23/12	5/19/17	Contig	"Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences"	SAMN02470041	GCA_000280905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/905/GCA_000280905.1_ASM28090v1	22965095	AA1529
Pseudomonas sp. GM79	1144338	PRJNA83101	83101	Proteobacteria	Gammaproteobacteria	6.70701	58.8	-	AKJE01	126	6176	5956	7/27/12	5/19/17	Contig	Oak Ridge National Lab	SAMN00839649	GCA_000282495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/495/GCA_000282495.1_GM79.fsa	23045501	GM79
Klebsiella aerogenes	548	PRJDB5885	395172	Proteobacteria	Gammaproteobacteria	5.03625	54.9	-	BDQT01	1	-	-	7/19/17	7/19/17	Scaffold	"Hattori Laboratory, Department of Center for Omics and Bioinformatics, Graduate School of Frontier Sciences, The University of Tokyo"	SAMD00083912	GCA_002260745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/745/GCA_002260745.1_ASM226074v1	-	1.10E+13
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.17459	54.9	-	LEDP01	64	5117	4866	6/9/15	3/26/17	Contig	JCVI	SAMN03732714	GCA_001022605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/605/GCA_001022605.1_ASM102260v1	-	GN02553
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.1703	38.7	-	NGIR01	36	4040	3879	5/16/17	5/24/17	Contig	JCVI	SAMN06892306	GCA_002144845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/845/GCA_002144845.1_ASM214484v1	-	ARLG1955
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.42894	67.2	-	LPDS01	145	6759	6353	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449438	GCA_001528985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/528/985/GCA_001528985.1_ASM152898v1	-	MSMB1162WGS
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.02646	64.2	-	FVAW01	13	5045	4920	3/10/17	3/18/17	Contig	SC	SAMEA2070825	GCA_900130355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/355/GCA_900130355.1_10625_5_68	-	153
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.46351	56.8	-	MRXV01	141	4372	4081	3/23/17	3/25/17	Scaffold	FDA/CFSAN	SAMN06124502	GCA_002071815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/071/815/GCA_002071815.1_ASM207181v1	-	MOD1-H2397
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.78124	32.6	-	CUCR01	229	2865	2545	3/31/15	3/26/17	Scaffold	SC	SAMEA1035129	GCA_001231125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/125/GCA_001231125.1_7067_4_35	-	51-03
Burkholderia sp. JGI 0001009-M21	1286831	PRJNA187224	187224	Proteobacteria	Betaproteobacteria	1.11304	60.2	-	AXXH01	138	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440727	GCA_000485075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/075/GCA_000485075.1_ASM48507v1	-	JGI 0001009-M21
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70936	31.2	-	CUIX01	22	1769	1668	3/31/15	3/18/17	Contig	SC	SAMEA1010547	GCA_001239665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/665/GCA_001239665.1_7038_3_4	-	OXC6253
Lactobacillus plantarum	1590	PRJNA338087	338087	Terrabacteria group	Firmicutes	3.45553	44.3	-	MCOL01	3	3388	3197	9/6/16	3/28/17	Contig	National Academy of Agrigultural Science	SAMN05520948	GCA_001720285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/285/GCA_001720285.1_ASM172028v1	-	JSA22
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.19041	59.9	-	FCHL01	16	4979	4808	1/21/16	3/27/17	Scaffold	SC	SAMEA2273930	GCA_001536505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/505/GCA_001536505.1_12082_2_64	-	2880STDY5682857
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.6456	47.2	-	CTJE01	39	4341	4154	3/26/15	3/26/17	Scaffold	SC	SAMEA980142	GCA_001218705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/705/GCA_001218705.1_4976_1_9	-	YE227/02
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.36434	53.4	-	LSYA01	59	2266	2093	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496988	GCA_002203135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/135/GCA_002203135.1_S114	-	4004
Rickettsia slovaca str. D-CWPP	1105109	PRJNA75033	75033	Proteobacteria	Alphaproteobacteria	1.27572	32.5	chromosome:NC_017065.1/CP003375.1	-	1	1551	1313	3/9/12	4/7/17	Complete Genome	Los Alamos National Laboratory	SAMN02603557	GCA_000252365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/365/GCA_000252365.1_ASM25236v1	-	D-CWPP
Brucella melitensis	29459	PRJNA278809	278809	Proteobacteria	Alphaproteobacteria	3.29051	57.2	-	LDTW01	40	3358	3143	8/10/16	4/5/17	Contig	Kuwait University	SAMN03733279	GCA_001702335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/702/335/GCA_001702335.1_ASM170233v1	-	KU/RCF-64
Lactobacillus rhamnosus	47715	PRJNA357881	357881	Terrabacteria group	Firmicutes	3.13477	46.6	-	MSTC01	97	3221	2715	2/1/17	2/1/17	Contig	University of North Carolina at Chapel Hill	SAMN06161582	GCA_001982435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/435/GCA_001982435.1_ASM198243v1	-	AMC010
Pasteurella multocida	747	PRJNA389152	389152	Proteobacteria	Gammaproteobacteria	2.39862	40.2	-	NIOC01	346	2352	1190	7/7/17	7/7/17	Contig	SDAU	SAMN07191094	GCA_002215925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/925/GCA_002215925.1_ASM221592v1	-	SKN1
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.14575	41.2	-	CWCG01	77	2088	1913	6/24/15	3/26/17	Contig	SC	SAMEA1032904	GCA_001177425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/425/GCA_001177425.1_6903_5_88	-	EQUI0137
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.96699	66.2	-	JVJN01	271	4642	4429	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197567	GCA_001072655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/655/GCA_001072655.1_ASM107265v1	26230489	376_SMAL
Enterococcus faecium EnGen0026	1138917	PRJNA82485	82485	Terrabacteria group	Firmicutes	2.92568	38.3	-	AHXS01	11	2993	2704	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779831	GCA_000322145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/145/GCA_000322145.1_Ente_faec_E2039_V1	-	E2039
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.15537	52.4	-	CQNR01	75	2526	2195	3/23/15	4/11/17	Contig	SC	SAMEA1690445	GCA_001122125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/125/GCA_001122125.1_8289_2_80	-	GCGS080
Streptococcus mutans NLML9	857127	PRJNA49809	49809	Terrabacteria group	Firmicutes	1.99601	36.7	-	AHSJ01	99	1979	1886	2/11/13	3/24/17	Contig	Cornell University	SAMN02429076	GCA_000339915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/915/GCA_000339915.1_ASM33991v1	23228887	NLML9
Enterococcus faecalis EnGen0119	1157353	PRJNA88207	88207	Terrabacteria group	Firmicutes	3.32198	37.1	-	AIQH01	19	3489	3331	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808891	GCA_000391245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/245/GCA_000391245.1_Ente_faec_B1874_V1	-	B1874
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.83961	27.1	-	LFPC01	51	3511	3383	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779998	GCA_001573615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/615/GCA_001573615.1_ASM157361v1	26939550	CDC 5247
Rickettsia philipii str. 364D	481009	PRJNA75027	75027	Proteobacteria	Alphaproteobacteria	1.28774	32.5	chromosome:NC_016930.1/CP003308.1	-	1	1537	1263	2/17/12	4/7/17	Complete Genome	Los Alamos National Laboratory	SAMN02603554	GCA_000283995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/995/GCA_000283995.1_ASM28399v1	-	364D
Bacillus subtilis	1423	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.04687	43.7	-	NPCN01	69	4143	3990	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372715	GCA_002272405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/405/GCA_002272405.1_assembly-7702_v1	-	7702
Vibrio parahaemolyticus S150	1394683	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.06032	45.3	-	AWID01	592	4813	4583	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338997	GCA_000489475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/475/GCA_000489475.1_S150	-	S150
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.85184	37.9	-	MLNR01	302	1901	1571	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297083	GCA_001868815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/815/GCA_001868815.1_ASM186881v1	27118061	AWRIB462
Xanthomonas oryzae pv. oryzae	64187	PRJNA269482	269482	Proteobacteria	Gammaproteobacteria	4.37859	63.8	-	JXHA01	453	4391	3489	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252550	GCA_001929145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/145/GCA_001929145.1_ASM192914v1	-	IXO725
Brucella abortus 88/19	1160178	PRJNA173572	173572	Proteobacteria	Alphaproteobacteria	3.28433	57.2	-	AQLS01	4	3373	3153	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811168	GCA_000366425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/425/GCA_000366425.1_Bruc_abor_88_19_V1	-	88/19
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.82786	32.3	-	MRKP01	99	1951	1544	4/19/17	8/21/17	Contig	FOI Swedish Defence Research Agency	SAMN03773887	GCA_002101005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/005/GCA_002101005.1_ASM210100v1	28348839	FDC415
Clostridioides difficile DA00065	1151319	PRJNA85813	85813	Terrabacteria group	Firmicutes	4.1387	28.5	-	AVIU01	149	3849	3673	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766634	GCA_000449945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/945/GCA_000449945.2_ASM44994v2	-	DA00065
Vibrio cholerae O1 str. EM-1626	1095648	PRJNA76231	76231	Proteobacteria	Gammaproteobacteria	4.05297	47.5	-	APFX01	93	3885	3718	3/22/13	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00989300	GCA_000348325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/325/GCA_000348325.2_ASM34832v2	-	EM-1626
Bacillus thuringiensis serovar oswaldocruzi	180872	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.39191	35.1	-	MOOJ01	54	5850	5486	5/17/17	6/19/17	Contig	Huazhong Agricultural University	SAMN05934504	GCA_002147835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/835/GCA_002147835.1_ASM214783v1	-	BGSC 4AS1
Chlamydia trachomatis	813	PRJEB2035	203744	PVC group	Chlamydiae	1.07543	41.3	-	CVNX01	41	987	928	4/22/15	3/27/17	Scaffold	SC	SAMEA1398375	GCA_001398255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/255/GCA_001398255.1_7501_6_62	-	R4175extract
Burkholderia pseudomallei MSHR4032	1434193	PRJNA230722	230722	Proteobacteria	Betaproteobacteria	7.28423	68	-	JPQL01	2	7543	6943	11/11/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02943438	GCA_000774335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/335/GCA_000774335.1_BCW_10	25676747	MSHR4032
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.78997	67	-	MUUL01	133	7453	7037	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001943	GCA_001992785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/785/GCA_001992785.1_ASM199278v1	-	VC8402
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.86107	50.7	-	NQDQ01	95	5065	4725	8/11/17	8/15/17	Contig	JCVI	SAMN07450655	GCA_002248985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/985/GCA_002248985.1_ASM224898v1	-	ECPUTH06
Legionella pneumophila	446	PRJNA260272	260272	Proteobacteria	Gammaproteobacteria	3.39037	38.2	-	JRMJ01	35	3100	2984	11/21/14	3/25/17	Contig	Centers of Disease Control	SAMN03071880	GCA_000785905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/905/GCA_000785905.1_ASM78590v1	25573935	D-5864
Pseudomonas syringae	317	PRJNA290794	290794	Proteobacteria	Gammaproteobacteria	6.60135	58.6	-	LGSI01	74	6010	5753	8/4/16	3/28/17	Contig	University of New Brunswick	SAMN03897383	GCA_001698815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/815/GCA_001698815.1_ASM169881v1	-	GR12-2
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.33399	41.2	-	CEEW01	160	2337	2185	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233913	GCA_000937035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/035/GCA_000937035.1_Velvet_assembly	-	LS3P
Streptococcus agalactiae MRI Z1-012	1154863	PRJNA86385	86385	Terrabacteria group	Firmicutes	2.08589	35.3	-	ALRX01	55	2176	2027	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993343	GCA_000289315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/315/GCA_000289315.1_ASM28931v1	-	MRI Z1-012
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	4.06423	39.1	-	JSCO01	60	3974	3813	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068249	GCA_000804795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/795/GCA_000804795.1_ASM80479v1	25487793	2005JSAB1
Pseudomonas aeruginosa LCT-PA220	1348564	PRJNA208779	208779	Proteobacteria	Gammaproteobacteria	6.8483	65.9	-	ATJT01	82	6512	6298	7/23/13	3/15/17	Scaffold	BGI Research Institute	SAMN02469367	GCA_000439855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/855/GCA_000439855.1_SOAPdenovo	24625870	LCT-PA220
Shigella flexneri 51581	1434154	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.33695	50.8	-	AZPG01	257	4776	3989	1/29/14	3/5/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437389	GCA_000566025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/025/GCA_000566025.1_ASM56602v1	-	51581
Bacillus anthracis	1392	PRJEB12289	314383	Terrabacteria group	Firmicutes	5.44172	35.1	-	FBXT01	49	6055	5729	3/5/16	3/28/17	Contig	ANSES	SAMEA3720268	GCA_900014365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/365/GCA_900014365.1_ANSES_88	-	-
Leptospira interrogans serovar Canicola	211880	PRJNA287446	287446	Spirochaetes	Spirochaetia	4.69632	35.1	-	LIHE01	319	4348	3805	10/26/15	4/10/17	Contig	School of Veterinary Medicine and Animal Science / University of Sao Paulo	SAMN03783263	GCA_001417585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/585/GCA_001417585.1_ASM141758v1	-	LO-3
Streptococcus pyogenes ABC020014529	1439008	PRJNA233112	233112	Terrabacteria group	Firmicutes	1.81644	38.4	-	JJHL01	5	1837	1730	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567461	GCA_000630885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/885/GCA_000630885.1_Stre_pyog_ABC020014529_V1	-	ABC020014529
Neisseria meningitidis Nm6756	1079755	PRJNA72663	72663	Proteobacteria	Betaproteobacteria	2.0574	51.9	-	AGBR01	176	2336	2016	12/29/11	3/21/17	Contig	University of Toronto	SAMN02471970	GCA_000240625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/625/GCA_000240625.2_ASM24062v2	22084315	Nm6756
Helicobacter pylori GAM201Ai	1159031	PRJNA89233	89233	Proteobacteria	delta/epsilon subdivisions	1.6105	39.4	-	APDC01	48	1580	1442	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436858	GCA_000345065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/065/GCA_000345065.2_ASM34506v2	-	GAM201Ai
Streptococcus pneumoniae 6901-05	760863	PRJNA48919	48919	Terrabacteria group	Firmicutes	2.10223	39.7	-	AGOF01	10	2282	1990	10/25/11	3/9/17	Contig	Institute for Genome Sciences	SAMN00792776	GCA_000232165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/165/GCA_000232165.2_ASM23216v2	-	6901-05
Rickettsia rickettsii str. Colombia	1105102	PRJNA75019	75019	Proteobacteria	Alphaproteobacteria	1.27008	32.5	chromosome:NC_016908.1/CP003306.1	-	1	1533	1259	2/17/12	3/30/17	Complete Genome	Los Alamos National Laboratory	SAMN02603550	GCA_000283775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/775/GCA_000283775.1_ASM28377v1	-	Colombia
Mycobacterium tuberculosis PanR0207	1344046	PRJNA207754	207754	Terrabacteria group	Actinobacteria	4.3988	65.5498	chromosome:NZ_CM002056.1/CM002056.1	ATMQ01	1	4264	4063	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471065	GCA_000443425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/425/GCA_000443425.1_fedora0207g_IS	23884993	PanR0207
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.86066	38	-	FFJE01	18	1870	1737	2/9/16	3/27/17	Scaffold	SC	SAMEA2674751	GCA_900035285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/285/GCA_900035285.1_14412_4_34	-	2842STDY5882062
Mycobacterium avium subsp. hominissuis	439334	PRJDB502	231331	Terrabacteria group	Actinobacteria	5.46347	68.9	-	BDOP01	377	5250	4885	4/1/17	4/17/17	Contig	Meijo University faculty of pharmacy	SAMD00076679	GCA_002090035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/035/GCA_002090035.1_ASM209003v1	28045086	Tone-7
Bacillus cereus BtB2-4	1053197	PRJNA70359	70359	Terrabacteria group	Firmicutes	5.66198	35.5	-	AHDR01	8	5980	5588	8/27/12	6/15/17	Scaffold	Broad Institute	SAMN02596829	GCA_000293605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/605/GCA_000293605.1_Baci_cere_BtB2-4_V1	-	BtB2-4
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.52093	31.9	-	JUUP01	240	2506	2411	7/10/15	3/26/17	Contig	University of Washington	SAMN03197955	GCA_001074185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/185/GCA_001074185.1_ASM107418v1	26230489	749_SEPI
Rickettsia rickettsii str. Hino	1105100	PRJNA75011	75011	Proteobacteria	Alphaproteobacteria	1.26984	32.5	chromosome:NC_016914.1/CP003309.1	-	1	1540	1260	2/17/12	3/30/17	Complete Genome	Los Alamos National Laboratory	SAMN02603548	GCA_000283815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/815/GCA_000283815.1_ASM28381v1	-	Hino
Yersinia pestis PY-25	992144	PRJNA64315	64315	Proteobacteria	Gammaproteobacteria	4.76991	47.4	-	AKSD01	533	4702	4320	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141465	GCA_000268665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/665/GCA_000268665.1_ASM26866v1	-	PY-25
Rickettsia rickettsii str. Hlp#2	1105101	PRJNA75015	75015	Proteobacteria	Alphaproteobacteria	1.27075	32.5	chromosome:NC_016915.1/CP003311.1	-	1	1553	1272	2/17/12	3/30/17	Complete Genome	Los Alamos National Laboratory	SAMN02603549	GCA_000283935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/935/GCA_000283935.1_ASM28393v1	-	Hlp#2
Rickettsia rickettsii str. Brazil	1105104	PRJNA75023	75023	Proteobacteria	Alphaproteobacteria	1.25568	32.5	chromosome:NC_016913.1/CP003305.1	-	1	1522	1259	2/17/12	3/30/17	Complete Genome	Los Alamos National Laboratory	SAMN02603552	GCA_000283955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/955/GCA_000283955.1_ASM28395v1	-	Brazil
Rickettsia slovaca 13-B	941638	PRJNA15712	15712	Proteobacteria	Alphaproteobacteria	1.27509	32.5	chromosome:NC_016639.1/CP002428.1	-	1	1548	1305	12/13/11	4/7/17	Complete Genome	CNRS	SAMN02603145	GCA_000237845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/845/GCA_000237845.1_ASM23784v1	22374949	13-B
Francisella cf. novicida Fx1	984129	PRJNA62751	62751	Proteobacteria	Gammaproteobacteria	1.91362	32.5	chromosome:NC_017450.1/CP002557.1	-	1	1834	1714	4/8/11	3/30/17	Complete Genome	LANL	SAMN02603513	GCA_000195535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/535/GCA_000195535.1_ASM19553v1	-	Fx1
Rickettsia rickettsii str. 'Sheila Smith'	392021	PRJNA9636	9636	Proteobacteria	Alphaproteobacteria	1.25771	32.5	chromosome:NC_009882.1/CP000848.1	-	1	1520	1246	10/2/07	3/29/17	Complete Genome	Institute for Systems Biology	SAMN02603386	GCA_000018225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/225/GCA_000018225.1_ASM1822v1	-	Sheila Smith
Flavobacterium psychrophilum JIP02/86	402612	PRJNA19979	19979	FCB group	Bacteroidetes/Chlorobi group	2.86038	32.5	chromosome:NC_009613.3/AM398681.2	-	1	2556	2446	6/25/07	8/3/16	Complete Genome	"I.N.R.A., FRANCE"	SAMEA3138269	GCA_000064305.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/064/305/GCA_000064305.2_ASM6430v2	17592475	JIP02/86
Yersinia pestis PY-29	992145	PRJNA64317	64317	Proteobacteria	Gammaproteobacteria	4.75803	47.5	-	AKSE01	428	4557	4262	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141466	GCA_000268685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/685/GCA_000268685.1_ASM26868v1	-	PY-29
Francisella tularensis subsp. novicida U112	401614	PRJNA16088	16088	Proteobacteria	Gammaproteobacteria	1.91003	32.5	chromosome:NC_008601.1/CP000439.1	-	1	1844	1743	11/28/06	3/30/17	Complete Genome	University of Washington	SAMN02604254	GCA_000014645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/645/GCA_000014645.1_ASM1464v1	-	U112
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.53489	31.9	-	JUSH01	117	2492	2393	7/10/15	3/26/17	Contig	University of Washington	SAMN03198015	GCA_001074495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/495/GCA_001074495.1_ASM107449v1	26230489	801_SEPI
Bacillus cereus HD73	1053200	PRJNA70365	70365	Terrabacteria group	Firmicutes	5.87919	35.3	-	AHDU01	22	6292	5879	8/27/12	6/15/17	Scaffold	Broad Institute	SAMN02596832	GCA_000293685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/685/GCA_000293685.1_Baci_cere_HD73_V1	-	HD73
Mycobacterium avium subsp. paratuberculosis	1770	PRJNA368791	368791	Terrabacteria group	Actinobacteria	4.85141	69.3	-	MWPB01	58	4609	4194	6/6/17	6/8/17	Contig	"Instituto Nacional de Investigacao Agraria e Veterinaria, IP (INIAV, IP)."	SAMN06272990	GCA_002174295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/295/GCA_002174295.1_ASM217429v1	-	C4A4
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.89264	38	-	FFJJ01	19	1916	1779	2/9/16	3/27/17	Scaffold	SC	SAMEA2674773	GCA_900035295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/295/GCA_900035295.1_14412_4_53	-	2842STDY5882081
Mycobacterium tuberculosis PanR0412	1346765	PRJNA208605	208605	Terrabacteria group	Actinobacteria	4.39322	65.4997	chromosome:NZ_CM002058.1/CM002058.1	ATDX01	1	4289	4077	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471067	GCA_000443445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/445/GCA_000443445.1_fedora0412_IS	23884993	PanR0412
Francisella sp. MA067296	475375	PRJNA328035	328035	Proteobacteria	Gammaproteobacteria	1.82793	32.494	chromosome:NZ_CP016930.1/CP016930.1; plasmid unnamed1:NZ_CP016929.1/CP016929.1	-	2	1757	1644	11/16/16	4/17/17	Complete Genome	Los Alamos National Laboratory	SAMN05363344	GCA_001879645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/645/GCA_001879645.1_ASM187964v1	-	MA067296
Streptococcus pneumoniae 7286-06	760869	PRJNA48931	48931	Terrabacteria group	Firmicutes	2.08256	39.9	-	AGOG01	13	2279	1991	10/25/11	3/9/17	Contig	Institute for Genome Sciences	SAMN00792656	GCA_000232185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/185/GCA_000232185.2_ASM23218v2	-	7286-06
Helicobacter pylori GAM118Bi	1159027	PRJNA89225	89225	Proteobacteria	delta/epsilon subdivisions	1.67871	39.1	-	APDD01	59	1636	1482	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436793	GCA_000345085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/085/GCA_000345085.2_ASM34508v2	-	GAM118Bi
Neisseria meningitidis Nm8663	1079756	PRJNA72665	72665	Proteobacteria	Betaproteobacteria	2.05789	51.9	-	AGBS01	176	2333	2038	12/29/11	3/21/17	Contig	University of Toronto	SAMN02471967	GCA_000240645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/645/GCA_000240645.2_ASM24064v2	22084315	Nm8663
Streptococcus pyogenes ABC020013952	1439006	PRJNA233111	233111	Terrabacteria group	Firmicutes	1.81743	38.4	-	JJHM01	5	1852	1736	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567460	GCA_000630905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/905/GCA_000630905.1_Stre_pyog_ABC020013952_V1	-	ABC020013952
Leptospira interrogans	173	PRJNA301003	301003	Spirochaetes	Spirochaetia	4.62592	35	-	LMXF01	295	4163	3756	1/27/16	4/10/17	Contig	MERIAL	SAMN04231379	GCA_001542585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/585/GCA_001542585.1_ASM154258v1	27044038	702
Bacillus anthracis	1392	PRJEB12289	314383	Terrabacteria group	Firmicutes	5.42654	35.1	-	FBXP01	85	6021	5716	3/5/16	3/28/17	Contig	ANSES	SAMEA3720270	GCA_900014375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/375/GCA_900014375.1_ANSES_90	-	-
Shigella flexneri 1997005	1434155	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.19682	50.8	-	AZPH01	254	4624	3878	1/29/14	2/22/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437390	GCA_000566045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/045/GCA_000566045.1_ASM56604v1	-	1997005
Pseudomonas aeruginosa LCT-PA41	1348339	PRJNA208985	208985	Proteobacteria	Gammaproteobacteria	6.851	65.9	-	ATJU01	88	6502	6295	7/23/13	3/15/17	Scaffold	BGI Research Institute	SAMN02469364	GCA_000439875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/875/GCA_000439875.1_SOAPdenovo	24407638	LCT-PA41
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	4.05477	38.8	-	JSCQ01	103	3956	3789	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068256	GCA_000804805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/805/GCA_000804805.1_ASM80480v1	25487793	2011SDAB1
Streptococcus agalactiae MRI Z1-024	1154866	PRJNA86391	86391	Terrabacteria group	Firmicutes	2.01634	35.2	-	ALRY02	62	2093	1962	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993341	GCA_000289335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/335/GCA_000289335.2_sag142_v2.0	-	MRI Z1-024
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.20664	40.9	-	CEKL01	152	2234	2086	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233985	GCA_000937075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/075/GCA_000937075.1_Velvet_assembly	-	S11L
Pseudomonas syringae pv. actinidiae	103796	PRJNA339327	339327	Proteobacteria	Gammaproteobacteria	6.43158	58.4	-	MOMJ01	351	6269	5646	12/20/16	3/28/17	Contig	New Zealand Institute for Plant and Food Research	SAMN05589882	GCA_001910485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/485/GCA_001910485.1_ASM191048v1	-	Psa NZ-66
Legionella pneumophila	446	PRJDB3521	276029	Proteobacteria	Gammaproteobacteria	3.47099	38.2	-	BBUG01	80	3200	3038	2/26/15	3/25/17	Contig	Yamaguchi University	SAMD00025829	GCA_000950675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/675/GCA_000950675.1_ASM95067v1	25977442	Bnt314
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.92558	50.5	-	NQDR01	122	5180	4785	8/11/17	8/15/17	Contig	JCVI	SAMN07450654	GCA_002249025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/025/GCA_002249025.1_ASM224902v1	-	ECPUTH07
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.69329	67	-	MUUM01	118	7354	6939	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001944	GCA_001992815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/815/GCA_001992815.1_ASM199281v1	-	VC9842
Burkholderia pseudomallei MSHR4462	1434205	PRJNA230739	230739	Proteobacteria	Betaproteobacteria	7.28318	68.1	-	JPQM01	2	7518	6936	11/11/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02943442	GCA_000774345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/345/GCA_000774345.1_BCW_21	25676747	MSHR4462
Chlamydia trachomatis	813	PRJEB2035	203744	PVC group	Chlamydiae	1.10201	41.2	-	CVNW01	53	1008	938	4/22/15	3/27/17	Scaffold	SC	SAMEA1398387	GCA_001398275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/275/GCA_001398275.1_7501_6_61	-	R33512extract
Bacillus thuringiensis serovar higo	132266	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.41488	35.1	-	MOOK01	242	6953	6406	5/17/17	6/16/17	Contig	Huazhong Agricultural University	SAMN05934506	GCA_002147895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/895/GCA_002147895.1_ASM214789v1	-	BGSC 4AU1
Vibrio cholerae O1 str. EM-1676A	1095649	PRJNA76233	76233	Proteobacteria	Gammaproteobacteria	4.00723	47.5	-	APFY01	85	3858	3641	3/22/13	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00991861	GCA_000348345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/345/GCA_000348345.2_ASM34834v2	-	EM-1676A
Clostridioides difficile DA00114	1151320	PRJNA85815	85815	Terrabacteria group	Firmicutes	4.0582	28.4	-	AVIV01	165	3806	3621	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766633	GCA_000449965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/965/GCA_000449965.2_ASM44996v2	-	DA00114
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.81171	32.3	-	MRKQ01	98	1894	1548	4/19/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773886	GCA_002101015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/015/GCA_002101015.1_ASM210101v1	28348839	FDC413
Brucella abortus 88/226	1160194	PRJNA173616	173616	Proteobacteria	Alphaproteobacteria	3.28613	57.2	-	AQLT01	3	3378	3156	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811169	GCA_000366445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/445/GCA_000366445.1_Bruc_abor_88_226_V1	-	88/226
Xanthomonas oryzae pv. oryzae	64187	PRJNA269483	269483	Proteobacteria	Gammaproteobacteria	4.36936	63.8	-	JXHB01	448	4392	3491	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252572	GCA_001929155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/155/GCA_001929155.1_ASM192915v1	-	IXO792
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.84953	37.9	-	MLNO01	233	1924	1676	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297080	GCA_001868825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/825/GCA_001868825.1_ASM186882v1	27118061	AWRIB459
Vibrio parahaemolyticus S148	1394682	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.02017	45.3	-	AWIE01	641	4861	4570	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338996	GCA_000489495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/495/GCA_000489495.1_S148	-	S148
Bacillus subtilis	1423	PRJEB15106	345337	Terrabacteria group	Firmicutes	4.09229	43.8	-	FMSN01	15	4207	3989	10/5/16	7/29/17	Contig	RPI	SAMEA4382852	GCA_900095345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/345/GCA_900095345.1_ASM90009534v1	-	Ia1a
Rickettsia massiliae MTU5	416276	PRJNA18271	18271	Proteobacteria	Alphaproteobacteria	1.37618	32.4911	chromosome:NC_009900.1/CP000683.1; plasmid pRMA:NC_009897.1/CP000684.1	-	2	1618	1179	10/4/07	4/6/17	Complete Genome	CNRS	SAMN02603147	GCA_000016625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/625/GCA_000016625.1_ASM1662v1	17916642	MTU5
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.79103	27.2	-	LFPD01	81	3444	3309	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779995	GCA_001573635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/635/GCA_001573635.1_ASM157363v1	26939550	Prevot Ped 1
Enterococcus faecalis EnGen0093	1157354	PRJNA88209	88209	Terrabacteria group	Firmicutes	2.92373	37.2	-	AIQL01	14	2955	2831	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808902	GCA_000391265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/265/GCA_000391265.1_Ente_faec_B2207_V1	-	B2207
Streptococcus mutans M2A	857126	PRJNA49811	49811	Terrabacteria group	Firmicutes	1.93024	36.9	-	AHSK01	115	1928	1829	2/11/13	3/23/17	Contig	Cornell University	SAMN02428988	GCA_000339935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/935/GCA_000339935.1_ASM33993v1	23228887	M2A
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.15025	52.4	-	CQLO01	70	2522	2198	3/23/15	4/11/17	Contig	SC	SAMEA1690350	GCA_001124565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/565/GCA_001124565.1_8289_2_2	-	GCGS002
Enterococcus faecium EnGen0044	1138918	PRJNA82487	82487	Terrabacteria group	Firmicutes	2.71627	38.2	-	AHXT01	14	2764	2588	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779832	GCA_000322165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/165/GCA_000322165.1_Ente_faec_E2071_V1	-	E2071
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.21436	65.7	-	JVHZ01	99	4881	4711	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197607	GCA_001072845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/845/GCA_001072845.1_ASM107284v1	26230489	416_SMAL
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.16055	41.2	-	CWGF01	99	2105	1909	6/24/15	3/26/17	Contig	SC	SAMEA1032905	GCA_001177445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/445/GCA_001177445.1_6817_2_79	-	EQUI0032
Brucella melitensis	29459	PRJNA278809	278809	Proteobacteria	Alphaproteobacteria	3.28363	57.2	-	LDTY01	43	3352	3119	8/10/16	4/5/17	Contig	Kuwait University	SAMN03733464	GCA_001702375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/702/375/GCA_001702375.1_ASM170237v1	-	KU/RCF-03
Francisella philomiragia	28110	PRJNA260288	260288	Proteobacteria	Gammaproteobacteria	2.03371	32.4878	chromosome:NZ_CP009444.1/CP009444.1; plasmid pFPK_1:NZ_CP009446.1/CP009446.1; plasmid pFPK_2:NZ_CP009445.1/CP009445.1	-	3	2003	1884	2/6/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03023970	GCA_000833315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/315/GCA_000833315.1_ASM83331v1	25931589	GA01-2801
Corynebacterium diphtheriae bv. mitis	1806053	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.42626	53.5	-	LSYC01	53	2374	2163	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497028	GCA_002203145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/145/GCA_002203145.1_S127	-	1482
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.6452	47.2	-	CTIP01	34	4336	4147	3/26/15	3/26/17	Scaffold	SC	SAMEA980184	GCA_001218905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/905/GCA_001218905.1_5116_2_2	-	YE221/02
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.35406	59.9	-	FCKD01	29	5120	4947	1/21/16	3/27/17	Scaffold	SC	SAMEA2274024	GCA_001536525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/525/GCA_001536525.1_12082_3_49	-	2880STDY5682952
Lactobacillus plantarum	1590	PRJNA309642	309642	Terrabacteria group	Firmicutes	3.0803	44.7	-	MEGY01	102	3001	2786	10/7/16	3/28/17	Contig	Tianjin University of Science&Technology	SAMN04437239	GCA_001754005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/754/005/GCA_001754005.1_ASM175400v1	-	CGMCC 8198
Campylobacter coli	195	PRJNA296596	296596	Proteobacteria	delta/epsilon subdivisions	1.9485	31	-	LKIV02	121	2068	1930	10/19/15	3/19/17	Contig	Corpoica	SAMN04100936	GCA_001399865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/865/GCA_001399865.2_ASM139986v2	26988047	COL B1-266
Burkholderia sp. JGI 0001009-G23	1279034	PRJNA185346	185346	Proteobacteria	Betaproteobacteria	0.706758	60.2	-	AXXU01	73	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440730	GCA_000485195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/195/GCA_000485195.1_ASM48519v1	-	JGI 0001009-G23
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.55343	32.6	-	CUDQ01	89	2576	2426	3/31/15	3/26/17	Scaffold	SC	SAMEA1035122	GCA_001231265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/265/GCA_001231265.1_7067_4_57	-	51-33
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.62469	56.5	-	MRXK01	25	4477	4293	3/31/17	4/6/17	Scaffold	FDA/CFSAN	SAMN06124517	GCA_002075615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/615/GCA_002075615.1_ASM207561v1	-	MOD1-H482
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.02677	64.2	-	FVBT01	9	5046	4922	3/10/17	3/18/17	Contig	SC	SAMEA2071249	GCA_900130365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/365/GCA_900130365.1_10625_5_69	-	154
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.98132	66.9	-	LPDU01	155	7373	6960	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449440	GCA_001529025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/025/GCA_001529025.1_ASM152902v1	-	MSMB1171WGS
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.99444	38.8	-	NGIS01	74	3881	3708	5/16/17	5/24/17	Contig	JCVI	SAMN06892304	GCA_002144875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/875/GCA_002144875.1_ASM214487v1	-	ARLG1957
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.91123	55.4	-	LEDO01	86	4867	4626	6/9/15	3/26/17	Contig	JCVI	SAMN03732715	GCA_001022615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/615/GCA_001022615.1_ASM102261v1	-	GN02555
Klebsiella aerogenes	548	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.19086	54.6	-	FKAH01	75	5134	4864	4/6/16	4/17/17	Scaffold	SC	SAMEA2273401	GCA_900076075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/075/GCA_900076075.1_11983_6_79	-	e1705
Pseudomonas sp. GM80	1144339	PRJNA83103	83103	Proteobacteria	Gammaproteobacteria	6.78616	59.2	-	AKJD01	282	6236	6040	7/27/12	5/19/17	Contig	Oak Ridge National Lab	SAMN00839650	GCA_000282515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/515/GCA_000282515.1_GM80.fsa	23045501	GM80
Streptomyces sp. AA0539	1210045	PRJNA170575	170575	Terrabacteria group	Actinobacteria	5.76856	72.9	-	ALNP01	57	5186	4996	9/17/12	5/19/17	Contig	"Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences"	SAMN02470042	GCA_000297635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/635/GCA_000297635.1_ASM29763v1	23144381	AA0539
Bacillus sp. FJAT-27225	1743144	PRJNA321789	321789	Terrabacteria group	Firmicutes	5.16611	42.6	-	MAYU01	27	4987	4853	7/14/16	4/13/17	Contig	Fujian Academy of Agricultural Sciences	SAMN05003852	GCA_001685025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/025/GCA_001685025.1_ASM168502v1	-	FJAT-27225
Acinetobacter sp. YZS-X1-1	1501691	PRJNA269548	269548	Proteobacteria	Gammaproteobacteria	3.27866	42	-	JWHB01	79	3135	2916	12/18/14	4/6/17	Contig	"Guangzhou Institute of Advanced Technology, Chinese Academy of Sciences"	SAMN03254432	GCA_000804305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/305/GCA_000804305.1_ASM80430v1	25676772	YZS-X1-1
Clostridium sp. CAG:575	1262823	PRJEB941	206816	Terrabacteria group	Firmicutes	1.42441	26.5	-	CBDL01	111	1362	1338	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138663	GCA_000435535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/535/GCA_000435535.1_MGS575	-	-
Rhodococcus sp. JCM 9793	1298612	PRJDB888	245943	Terrabacteria group	Actinobacteria	6.27843	65.3	-	BBEH01	1101	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016836	GCA_001312665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/665/GCA_001312665.1_ASM131266v1	-	JCM 9793
Enterobacter sp. NFIX04	1566256	PRJEB17240	351430	Proteobacteria	Gammaproteobacteria	5.59877	54	-	FONC01	25	5385	5151	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159468	GCA_900112805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/805/GCA_900112805.1_IMG-taxon_2600255311_annotated_assembly	-	NFIX04
Staphylococcus sp. HMSC064A01	1715035	PRJNA296162	296162	Terrabacteria group	Firmicutes	2.57756	33.6	-	LTPS01	51	2462	2384	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498573	GCA_001837155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/155/GCA_001837155.1_ASM183715v1	-	HMSC064A01
Corynebacterium sp. UBA4397	1946394	PRJNA348753	348753	Terrabacteria group	Actinobacteria	2.48742	60.2	-	DGRD01	54	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452122	GCA_002390965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/965/GCA_002390965.1_ASM239096v1	28894102	-
Streptococcus sp. CCH5-D3	1768764	PRJNA299404	299404	Terrabacteria group	Firmicutes	2.10851	39.8	-	LSIW01	178	1963	1863	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299447	GCA_001556435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/435/GCA_001556435.1_ASM155643v1	-	CCH5-D3
Prevotella sp. UBA2755	1947111	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.08268	46.9	-	DEJF01	80	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451414	GCA_002353225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/225/GCA_002353225.1_ASM235322v1	28894102	-
Mycobacterium sp. E2479	1834134	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.67262	66.1	-	LZJR01	174	5299	5024	6/17/16	4/12/17	Contig	JCVI	SAMN04634224	GCA_001667925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/925/GCA_001667925.1_ASM166792v1	-	E2479
Paenibacillus sp. RU4X	1907395	PRJEB18847	360746	Terrabacteria group	Firmicutes	5.44593	59.3	-	FTLY01	18	4865	4709	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05880555	GCA_900155905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/905/GCA_900155905.1_IMG-taxon_2710264755_annotated_assembly	-	RU4X
Prochlorococcus sp. scB245a_521B10	1471525	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.55509	31.2	-	JFNX01	218	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671396	GCA_000635835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/835/GCA_000635835.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Prochlorococcus sp. scB245a_521M10	1471528	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.14271	31	-	JFOA01	261	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671399	GCA_000635855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/855/GCA_000635855.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Paenibacillus sp. J6	903526	PRJEB20433	382932	Terrabacteria group	Firmicutes	4.83437	51.8	-	FXAB01	107	4428	4228	4/19/17	4/22/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02744102	GCA_900177285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/285/GCA_900177285.1_IMG-taxon_2528768219_annotated_assembly	-	J6
Mycobacterium sp. E2660	1834136	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.77809	67.4	-	LZJQ01	153	5361	5132	6/17/16	4/13/17	Contig	JCVI	SAMN04634225	GCA_001667995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/995/GCA_001667995.1_ASM166799v1	-	E2660
Prevotella sp. UBA2754	1947110	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.88489	45.9	-	DEJG01	28	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451416	GCA_002353295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/295/GCA_002353295.1_ASM235329v1	28894102	-
Streptococcus sp. CCH8-H5	1768767	PRJNA299404	299404	Terrabacteria group	Firmicutes	2.09684	39.8	-	LSIZ01	157	1929	1838	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299450	GCA_001556505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/505/GCA_001556505.1_ASM155650v1	-	CCH8-H5
Staphylococcus sp. HMSC064E03	1715143	PRJNA296271	296271	Terrabacteria group	Firmicutes	2.37606	32.5	-	LWQA01	74	2354	2208	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498637	GCA_001837215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/215/GCA_001837215.1_ASM183721v1	-	HMSC064E03
Enterobacter sp. NFIX59	1566258	PRJEB17361	351550	Proteobacteria	Gammaproteobacteria	4.69767	55.8	-	FOQN01	16	4580	4413	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159336	GCA_900113755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/755/GCA_900113755.1_IMG-taxon_2602042047_annotated_assembly	-	NFIX59
Rhodococcus sp. HA99	402289	PRJDB903	245945	Terrabacteria group	Actinobacteria	5.89113	65.4	-	BBEW01	1267	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016834	GCA_001312925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/925/GCA_001312925.1_ASM131292v1	-	JCM 9789
Clostridium sp. CAG:230	1262782	PRJEB771	206653	Terrabacteria group	Firmicutes	2.68192	38.7	-	CBCQ01	108	2237	2210	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138665	GCA_000435575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/575/GCA_000435575.1_MGS230	-	-
Acinetobacter sp. A47	1561217	PRJNA264861	264861	Proteobacteria	Gammaproteobacteria	3.9135	44.5	-	JSUS01	71	3701	3549	12/19/14	4/6/17	Contig	CSUF	SAMN03143560	GCA_000805455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/455/GCA_000805455.1_ASM80545v1	25744988	A47
Bacillus sp. FJAT-27986	1743146	PRJNA321927	321927	Terrabacteria group	Firmicutes	3.81788	37.6	-	MAYV01	20	3711	3551	7/14/16	4/13/17	Contig	Fujian Academy of Agricultural Sciences	SAMN05006709	GCA_001685035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/035/GCA_001685035.1_ASM168503v1	-	FJAT-27986
Streptomyces sp. FxanaC1	1157640	PRJNA169746	169746	Terrabacteria group	Actinobacteria	7.84643	71.1	-	AQWO01	63	6891	6571	4/20/13	5/19/17	Contig	DOE Joint Genome Institute	SAMN02440408	GCA_000375625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/625/GCA_000375625.1_ASM37562v1	-	FxanaC1
Pseudomonas sp. GM84	1144340	PRJNA83105	83105	Proteobacteria	Gammaproteobacteria	5.81877	63.2	-	AKJC01	384	5299	5108	7/27/12	5/19/17	Contig	Oak Ridge National Lab	SAMN00839651	GCA_000282535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/535/GCA_000282535.1_GM84.fsa	23045501	GM84
Klebsiella aerogenes	548	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.69379	55.5	-	FKCI01	26	4555	4381	4/6/16	4/5/17	Scaffold	SC	SAMEA2273454	GCA_900076565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/565/GCA_900076565.1_12045_5_33	-	e2355
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.80049	55.4	-	LEDK01	36	4706	4510	6/9/15	3/26/17	Contig	JCVI	SAMN03732720	GCA_001022735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/735/GCA_001022735.1_ASM102273v1	-	GN02645
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.96902	38.8	-	NGIT01	68	3866	3681	5/16/17	5/24/17	Contig	JCVI	SAMN06892303	GCA_002144885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/885/GCA_002144885.1_ASM214488v1	-	ARLG1961
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.02327	67	-	LPDV01	162	7397	6965	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449441	GCA_001529035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/035/GCA_001529035.1_ASM152903v1	-	MSMB1173WGS
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.02577	64.2	-	FVBH01	8	5044	4922	3/10/17	3/18/17	Contig	SC	SAMEA2070420	GCA_900130375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/375/GCA_900130375.1_10625_5_70	-	155
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.63282	56.5	-	MRXL01	28	4484	4294	3/31/17	4/6/17	Scaffold	FDA/CFSAN	SAMN06124501	GCA_002075635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/635/GCA_002075635.1_ASM207563v1	-	MOD1-H2395
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.58101	32.6	-	CUCY01	83	2579	2427	3/31/15	3/26/17	Scaffold	SC	SAMEA1035152	GCA_001232245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/245/GCA_001232245.1_7067_4_40	-	51-09
Burkholderia sp. JGI 0001021-D09	1268349	PRJNA183583	183583	Proteobacteria	Betaproteobacteria	0.233151	59.1	-	AXXY01	64	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441434	GCA_000485235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/235/GCA_000485235.1_ASM48523v1	-	JGI 0001021-D09
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.88647	31	-	LBEO01	98	2007	1873	10/27/15	3/18/17	Contig	FDA	SAMN03344550	GCA_001416745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/745/GCA_001416745.1_ASM141674v1	-	CVM N42205
Lactobacillus plantarum	1590	PRJNA283610	283610	Terrabacteria group	Firmicutes	3.31316	44.4	-	LEBU01	77	3249	3090	12/3/16	3/28/17	Contig	"Faculty of Agro-industry, Prince of Songkla University, wageningen university"	SAMN03654505	GCA_001888245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/245/GCA_001888245.1_ASM188824v1	-	I61
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.01031	60.2	-	FCLR01	17	4728	4567	1/21/16	3/27/17	Scaffold	SC	SAMEA2274066	GCA_001536545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/545/GCA_001536545.1_12082_3_88	-	2880STDY5682994
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.52085	46.9	-	CTQV01	117	4267	4019	3/26/15	3/26/17	Scaffold	SC	SAMEA980212	GCA_001219245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/245/GCA_001219245.1_4976_6_2	-	YE237/02
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.4329	53.5	-	LSXY01	42	2367	2183	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496984	GCA_002203155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/155/GCA_002203155.1_S112	-	1791
Rickettsia amblyommatis	33989	PRJNA316319	316319	Proteobacteria	Alphaproteobacteria	1.48088	32.4475	chromosome:NZ_CP015012.1/CP015012.1; plasmid unnamed_1:NZ_CP015015.1/CP015015.1; plasmid unnamed_2:NZ_CP015013.1/CP015013.1; plasmid unnamed_3:NZ_CP015014.1/CP015014.1	-	4	1724	1250	4/4/17	4/5/17	Complete Genome	University of New Hampshire	SAMN04576393	GCA_002078335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/335/GCA_002078335.1_ASM207833v1	-	-
Brucella melitensis	29459	PRJNA339926	339926	Proteobacteria	Alphaproteobacteria	3.28477	57.3	-	MIJO01	32	3351	3135	10/28/16	4/5/17	Contig	NCDC	SAMN05615422	GCA_001856285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/285/GCA_001856285.1_ASM185628v1	-	Br.m-1771/12-Geo
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.1259	41.2	-	CWCB01	73	2054	1876	6/23/15	3/26/17	Contig	SC	SAMEA1032906	GCA_001177465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/465/GCA_001177465.1_6903_5_90	-	EQUI0139
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.20248	65.7	-	JVHP01	68	4874	4703	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197617	GCA_001072915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/915/GCA_001072915.1_ASM107291v1	26230489	424_SMAL
Enterococcus faecium EnGen0043	1138919	PRJNA82489	82489	Terrabacteria group	Firmicutes	2.81852	38.4	-	AHXU01	6	2808	2566	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779834	GCA_000322185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/185/GCA_000322185.1_Ente_faec_E2134_V1	-	E2134
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14975	52.4	-	CQLG01	75	2519	2195	3/22/15	4/11/17	Contig	SC	SAMEA1690384	GCA_001124825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/825/GCA_001124825.1_8289_2_85	-	GCGS085
Streptococcus mutans N3209	857125	PRJNA49813	49813	Terrabacteria group	Firmicutes	1.9534	36.7	-	AHSL01	113	1914	1827	2/11/13	3/23/17	Contig	Cornell University	SAMN02429077	GCA_000339955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/955/GCA_000339955.1_ASM33995v1	23228887	N3209
Enterococcus faecalis EnGen0094	1157355	PRJNA88211	88211	Terrabacteria group	Firmicutes	3.32412	37.1	-	AIQN01	12	3503	3329	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808913	GCA_000391285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/285/GCA_000391285.1_Ente_faec_B2255_V1	-	B2255
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.78375	27.1	-	LFPE01	64	3464	3315	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03780000	GCA_001573655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/655/GCA_001573655.1_ASM157365v1	26939550	Prevot R81-3A
Rickettsia amblyommatis str. GAT-30V	1105111	PRJNA75043	75043	Proteobacteria	Alphaproteobacteria	1.48088	32.4475	chromosome:NC_017028.1/CP003334.1; plasmid pMCE_1:NC_017020.1/CP003335.1; plasmid pMCE_2:NC_017029.1/CP003336.1; plasmid pMCE_3:NC_017021.1/CP003337.1	-	4	1718	1232	3/1/12	9/4/17	Complete Genome	Los Alamos National Laboratory	SAMN02603561	GCA_000284055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/055/GCA_000284055.1_ASM28405v1	-	GAT-30V
Bacillus subtilis subsp. subtilis str. MP9	1310157	PRJNA194413	194413	Terrabacteria group	Firmicutes	3.9525	43.8	-	APMW01	323	4146	3844	11/19/13	3/24/17	Scaffold	University of Copenhagen	SAMN01991234	GCA_000497345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/345/GCA_000497345.1_MP9	24248063	MP9
Vibrio parahaemolyticus S147	1394681	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.12079	45.4	-	AWIF01	655	4909	4653	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338995	GCA_000489515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/515/GCA_000489515.1_S147	-	S147
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.92119	38	-	MLNU01	386	2016	1700	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297086	GCA_001868865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/865/GCA_001868865.1_ASM186886v1	27118061	AWRIB490
Xanthomonas oryzae pv. oryzae	64187	PRJNA269485	269485	Proteobacteria	Gammaproteobacteria	4.3491	63.8	-	JXHD01	466	4367	3477	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252583	GCA_001929165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/165/GCA_001929165.1_ASM192916v1	-	IXO842
Brucella abortus 90/50	1160196	PRJNA173618	173618	Proteobacteria	Alphaproteobacteria	3.28633	57.2	-	AQLU01	4	3377	3152	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811171	GCA_000366465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/465/GCA_000366465.1_Bruc_abor_90_50_V1	-	90/50
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.77283	32.3	-	MRKS01	211	1833	1533	4/19/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773884	GCA_002101035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/035/GCA_002101035.1_ASM210103v1	28348839	FDC411
Clostridioides difficile DA00126	1151321	PRJNA85817	85817	Terrabacteria group	Firmicutes	4.16777	28.2	-	AVIW01	91	3849	3682	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766635	GCA_000449985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/449/985/GCA_000449985.2_ASM44998v2	-	DA00126
Vibrio cholerae O1 str. EM-1727	1095650	PRJNA76235	76235	Proteobacteria	Gammaproteobacteria	4.06719	47.4	-	APFZ01	109	3944	3774	3/22/13	3/23/17	Scaffold	Institute for Genome Sciences	SAMN00991869	GCA_000348365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/365/GCA_000348365.1_ASM34836v1	-	EM-1727
Bacillus thuringiensis serovar argentinensis	180880	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.18575	35.2	-	MOOO01	172	6647	6006	5/17/17	6/16/17	Contig	Huazhong Agricultural University	SAMN05934530	GCA_002147935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/935/GCA_002147935.1_ASM214793v1	-	BGSC 4BV1
Chlamydia trachomatis	813	PRJEB2035	203744	PVC group	Chlamydiae	1.11097	41.4	-	CVNP01	105	1019	938	4/22/15	3/27/17	Scaffold	SC	SAMEA1398397	GCA_001398295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/295/GCA_001398295.1_7396_3_21	-	R4175IMS
Burkholderia pseudomallei MSHR3951	1434192	PRJNA230721	230721	Proteobacteria	Betaproteobacteria	7.34281	68	-	JPVA01	2	7619	7033	11/11/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02948390	GCA_000774385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/385/GCA_000774385.1_BCW_1	25676747	MSHR3951
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.87248	67	-	MUUN01	128	7522	7107	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001945	GCA_001992825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/825/GCA_001992825.1_ASM199282v1	-	VC10567
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.18937	50.6	-	NQDY01	93	5392	5049	8/11/17	8/15/17	Contig	JCVI	SAMN07450707	GCA_002249075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/075/GCA_002249075.1_ASM224907v1	-	ECPSTH06
Legionella pneumophila	446	PRJDB3521	276029	Proteobacteria	Gammaproteobacteria	3.47232	38.2	-	BBUH01	86	3197	3033	2/26/15	3/25/17	Contig	Yamaguchi University	SAMD00025830	GCA_000950695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/695/GCA_000950695.1_ASM95069v1	25977442	Ofk308
Pseudomonas syringae pv. actinidifoliorum	1674924	PRJNA369569	369569	Proteobacteria	Gammaproteobacteria	6.42162	58.6	-	MUKM01	116	6107	5612	2/17/17	3/29/17	Contig	University of Otago	SAMN06289379	GCA_002003545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/003/545/GCA_002003545.1_ASM200354v1	-	ICMP18802
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.16619	41	-	CEJC01	105	2161	1993	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234009	GCA_000937175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/175/GCA_000937175.1_Velvet_assembly	-	S14J
Streptococcus agalactiae MRI Z1-038	1154869	PRJNA86397	86397	Terrabacteria group	Firmicutes	2.07904	35.3	-	ALRZ02	38	2155	2029	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993339	GCA_000289355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/355/GCA_000289355.2_sag145_v2.0	-	MRI Z1-038
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	3.93153	39	-	JSCP01	73	3811	3644	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068253	GCA_000804815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/815/GCA_000804815.1_ASM80481v1	25487793	2011SHAB1
Pseudomonas aeruginosa str. Stone 130	1125697	PRJNA169469	169469	Proteobacteria	Gammaproteobacteria	7.4954	65.3	-	AQFN01	6	7303	7068	4/8/13	3/15/17	Scaffold	Broad Institute	SAMN01779569	GCA_000478465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/465/GCA_000478465.2_Pseu_aeru_Stone_130_V1	-	Stone 130
Shigella flexneri 2000019	1434156	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.45347	50.5	-	AZPI01	295	4935	4152	1/29/14	3/5/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437391	GCA_000566065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/065/GCA_000566065.1_ASM56606v1	-	2000019
Bacillus anthracis	1392	PRJNA264742	264742	Terrabacteria group	Firmicutes	5.44337	35.1	-	JTAS01	75	6033	5689	11/14/14	3/25/17	Scaffold	Georgia Institute of Technology	SAMN03165110	GCA_000782875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/875/GCA_000782875.1_ASM78287v1	-	2000031006
Leptospira interrogans	173	PRJNA301003	301003	Spirochaetes	Spirochaetia	4.62717	35	-	LMXK01	274	4168	3757	1/27/16	4/10/17	Contig	MERIAL	SAMN04235587	GCA_001542605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/605/GCA_001542605.1_ASM154260v1	27044038	733
Streptococcus pyogenes ABC020006103	1438993	PRJNA233108	233108	Terrabacteria group	Firmicutes	1.86627	38.6	-	JJHN01	7	1928	1793	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567457	GCA_000630925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/925/GCA_000630925.1_Stre_pyog_ABC020006103_V1	-	ABC020006103
Neisseria meningitidis Nm1140	1079757	PRJNA72667	72667	Proteobacteria	Betaproteobacteria	2.05608	52	-	AGBT01	152	2339	2019	12/29/11	3/21/17	Contig	University of Toronto	SAMN02471965	GCA_000240665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/665/GCA_000240665.2_ASM24066v2	22084315	Nm1140
Helicobacter pylori GAM119Bi	1159028	PRJNA89227	89227	Proteobacteria	delta/epsilon subdivisions	1.65718	39.2	-	APDE01	46	1640	1483	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436691	GCA_000345105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/105/GCA_000345105.2_ASM34510v2	-	GAM119Bi
Streptococcus pneumoniae NP070	760884	PRJNA48961	48961	Terrabacteria group	Firmicutes	2.10217	39.7	-	AGOH01	10	2332	2037	10/25/11	3/8/17	Contig	Institute for Genome Sciences	SAMN00792699	GCA_000232205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/205/GCA_000232205.2_ASM23220v2	-	NP070
Francisella tularensis subsp. novicida	264	PRJNA260086	260086	Proteobacteria	Gammaproteobacteria	1.92525	32.4409	chromosome:NZ_CP009682.1/CP009682.1; plasmid pFNE_1:NZ_CP009683.1/CP009683.1	-	2	1872	1769	11/17/16	4/5/17	Complete Genome	Los Alamos National Laboratory	SAMN03107514	GCA_001880245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/245/GCA_001880245.1_ASM188024v1	-	AZ06-7470
Mycobacterium tuberculosis PanR0410	1346767	PRJNA208603	208603	Terrabacteria group	Actinobacteria	4.40484	65.5498	chromosome:NZ_CM002059.1/CM002059.1	ATDZ01	1	4271	4077	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471081	GCA_000443465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/465/GCA_000443465.1_fedora0410_IS	23884993	PanR0410
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.78668	37.9	-	FFIK01	17	1758	1641	2/9/16	3/27/17	Scaffold	SC	SAMEA2674748	GCA_900035525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/525/GCA_900035525.1_14412_4_31	-	2842STDY5882059
Mycobacterium avium subsp. paratuberculosis	1770	PRJNA368791	368791	Terrabacteria group	Actinobacteria	4.84773	69.3	-	MWQD01	51	4608	4205	6/8/17	6/10/17	Contig	"Instituto Nacional de Investigacao Agraria e Veterinaria, IP (INIAV, IP)."	SAMN06272994	GCA_002180005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/005/GCA_002180005.1_ASM218000v1	-	A3
Bacillus cereus HuA2-1	1053201	PRJNA70367	70367	Terrabacteria group	Firmicutes	6.46528	35.2	-	AHDV01	11	6693	6196	8/27/12	6/15/17	Scaffold	Broad Institute	SAMN02596833	GCA_000293705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/705/GCA_000293705.1_Baci_cere_HuA2-1_V1	-	HuA2-1
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.59	31.9	-	JUSG01	132	2540	2437	7/10/15	3/26/17	Contig	University of Washington	SAMN03198016	GCA_001074505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/505/GCA_001074505.1_ASM107450v1	26230489	802_SEPI
Campylobacter sp. RM12175	1660076	PRJNA284993	284993	Proteobacteria	delta/epsilon subdivisions	1.61261	32.4338	chromosome:NZ_CP018793.1/CP018793.1; plasmid pVIC12175-1:NZ_CP018794.1/CP018794.1; plasmid pVIC12175-2:NZ_CP018795.1/CP018795.1	-	3	1689	1620	5/15/17	5/23/17	Complete Genome	"USDA, ARS, WRRC"	SAMN03737998	GCA_002139875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/875/GCA_002139875.1_ASM213987v1	28854596	RM12175
Yersinia pestis PY-32	992146	PRJNA64319	64319	Proteobacteria	Gammaproteobacteria	4.9006	47.5	-	AKSF01	576	4826	4432	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141467	GCA_000268705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/705/GCA_000268705.1_ASM26870v1	-	PY-32
Campylobacter jejuni	197	PRJNA300433	300433	Proteobacteria	delta/epsilon subdivisions	1.64871	30.5599	chromosome:NZ_CP013116.1/CP013116.1; plasmid unnamed:NZ_CP013117.1/CP013117.1	-	2	1752	1628	11/5/15	4/10/17	Chromosome	University of Tulsa	SAMN04221430	GCA_001432345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/345/GCA_001432345.1_ASM143234v1	27231378	T1-21
Rickettsia amblyommatis	33989	PRJNA256465	256465	Proteobacteria	Alphaproteobacteria	1.45621	32.4132	chromosome:NZ_CP012420.1/CP012420.1; plasmid pRAMAC18:NZ_CP012421.1/CP012421.1; plasmid pRAMAC23:NZ_CP012422.1/CP012422.1	-	3	1706	1233	8/25/15	4/10/17	Complete Genome	University of Minnesota	SAMN03997007	GCA_001273795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/795/GCA_001273795.1_ASM127379v1	-	Ac37
Rickettsia africae ESF-5	347255	PRJNA18269	18269	Proteobacteria	Alphaproteobacteria	1.29092	32.4105	chromosome:NC_012633.1/CP001612.1; plasmid pRAF:NC_012634.1/CP001613.1	-	2	1568	1271	4/29/09	4/17/17	Complete Genome	CNRS	SAMN02603146	GCA_000023005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/005/GCA_000023005.1_ASM2300v1	19379498	ESF-5
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28403	32.4	chromosome:AP017602.1	-	1	1222	1123	1/24/17	1/27/17	Complete Genome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053838	GCA_002356695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/695/GCA_002356695.1_ASM235669v1	-	YH_M
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28403	32.4	chromosome:AP017581.1	-	1	-	-	1/24/17	1/27/17	Complete Genome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053842	GCA_002357115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/115/GCA_002357115.1_ASM235711v1	-	Tsuneishi
Campylobacter jejuni	197	PRJNA401331	401331	Proteobacteria	delta/epsilon subdivisions	1.55831	30.3	chromosome:CP023343.1	-	1	1607	1567	9/19/17	9/19/17	Chromosome	Universidade Federal de Pelotas	SAMN07602919	GCA_002312965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/965/GCA_002312965.1_ASM231296v1	-	104
Yersinia pestis PY-34	992147	PRJNA64321	64321	Proteobacteria	Gammaproteobacteria	4.68194	47.5	-	AKSG01	513	4562	4260	6/15/12	3/27/17	Contig	Institute for Genome Sciences	SAMN02141468	GCA_000268725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/725/GCA_000268725.2_ASM26872v2	-	PY-34
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28394	32.4	chromosome:AP017580.1	-	1	-	-	1/24/17	1/27/17	Complete Genome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053847	GCA_002357135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/135/GCA_002357135.1_ASM235713v1	-	PO-1
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.58589	31.9	-	JUPV01	149	2531	2433	7/10/15	3/26/17	Contig	University of Washington	SAMN03198079	GCA_001074755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/755/GCA_001074755.1_ASM107475v1	26230489	872_SEPI
Bacillus cereus HuB1-1	1053207	PRJNA70379	70379	Terrabacteria group	Firmicutes	5.74395	35.1	-	AHEB01	7	5995	5662	8/27/12	5/18/17	Scaffold	Broad Institute	SAMN02596839	GCA_000293725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/725/GCA_000293725.1_Baci_cere_HuB1-1_V1	-	HuB1-1
Mycobacterium avium subsp. hominissuis	439334	PRJNA338076	338076	Terrabacteria group	Actinobacteria	5.44889	69	-	NISH01	70	5165	4939	6/20/17	8/17/17	Contig	National University of Singapore	SAMN07184188	GCA_002201735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/735/GCA_002201735.1_ASM220173v1	28798178	11
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.80871	37.9	-	FFJH01	11	1766	1627	2/9/16	3/27/17	Scaffold	SC	SAMEA2674765	GCA_900035535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/535/GCA_900035535.1_14412_4_48	-	2842STDY5882076
Mycobacterium tuberculosis PanR0411	1346766	PRJNA208604	208604	Terrabacteria group	Actinobacteria	4.40459	65.5498	chromosome:NZ_CM002060.1/CM002060.1	ATDY01	1	4271	4072	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471104	GCA_000443485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/485/GCA_000443485.1_fedora0411_IS	23884993	PanR0411
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28323	32.4	chromosome:AP017579.1	-	1	-	-	1/24/17	1/27/17	Complete Genome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053848	GCA_002357155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/155/GCA_002357155.1_ASM235715v1	-	OHH-1
Streptococcus pneumoniae 5787-06	760866	PRJNA48925	48925	Terrabacteria group	Firmicutes	2.12082	39.7	-	AGOM01	12	2304	2013	10/25/11	3/8/17	Contig	Institute for Genome Sciences	SAMN00792754	GCA_000232305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/305/GCA_000232305.2_ASM23230v2	-	5787-06
Helicobacter pylori GAM120Ai	1159029	PRJNA89229	89229	Proteobacteria	delta/epsilon subdivisions	1.68267	39.1	-	APDF01	51	1665	1514	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436926	GCA_000345125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/125/GCA_000345125.2_ASM34512v2	-	GAM120Ai
Neisseria meningitidis NM233	1055328	PRJNA68845	68845	Proteobacteria	Betaproteobacteria	2.00471	52	-	AGRQ01	314	2218	1985	1/13/12	3/15/17	Contig	University of Pittsburgh School of Medicine	SAMN02471928	GCA_000242735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/735/GCA_000242735.2_ASM24273v2	22558202	NM233
Streptococcus pyogenes ABC020005887	1438991	PRJNA233106	233106	Terrabacteria group	Firmicutes	1.83053	38.5	-	JJHO01	2	1878	1754	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567455	GCA_000630945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/945/GCA_000630945.1_Stre_pyog_ABC020005887_V1	-	ABC020005887
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.71581	35	-	JQOL01	280	4277	3881	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949576	GCA_001567645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/645/GCA_001567645.1_ASM156764v1	26833181	H78Shuang4
Bacillus anthracis	1392	PRJNA264742	264742	Terrabacteria group	Firmicutes	5.43554	35.1	-	JTAQ01	33	6042	5699	11/14/14	3/25/17	Scaffold	Georgia Institute of Technology	SAMN03165112	GCA_000782885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/885/GCA_000782885.1_ASM78288v1	-	2000031023
Shigella flexneri 2001020	1434157	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.44827	50.5	-	AZPJ01	301	4931	4097	1/29/14	3/5/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437392	GCA_000566085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/085/GCA_000566085.1_ASM56608v1	-	2001020
Pseudomonas aeruginosa CF614	1402580	PRJNA219942	219942	Proteobacteria	Gammaproteobacteria	6.79744	66	-	AXON01	7	6449	6269	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360752	GCA_000480355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/355/GCA_000480355.1_Pseu_aeru_CF614_V1	-	CF614
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	4.01981	38.9	-	JSCR01	53	3903	3759	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068257	GCA_000804825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/825/GCA_000804825.1_ASM80482v1	25487793	2011SDAB2
Streptococcus agalactiae MRI Z1-214	1154877	PRJNA86413	86413	Terrabacteria group	Firmicutes	2.2988	35.4	-	ALSE01	107	2479	2225	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993331	GCA_000289395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/395/GCA_000289395.1_ASM28939v1	-	MRI Z1-214
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.0297	41.3	-	CEJQ01	62	2026	1928	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233968	GCA_000937215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/215/GCA_000937215.1_Velvet_assembly	-	LSS
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.09723	58.6	-	MTYR01	334	5873	5312	4/27/17	5/3/17	Contig	Massey University	SAMN06197074	GCA_002111795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/795/GCA_002111795.1_ASM211179v1	28369338	C75
Legionella pneumophila	446	PRJDB3521	276029	Proteobacteria	Gammaproteobacteria	3.39376	38.2	-	BBUI01	66	3107	2951	2/26/15	3/25/17	Contig	Yamaguchi University	SAMD00025831	GCA_000950745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/745/GCA_000950745.1_ASM95074v1	25977442	Twr292
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.85499	50.4	-	NQDV01	92	4979	4662	8/11/17	8/15/17	Contig	JCVI	SAMN07450710	GCA_002249085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/085/GCA_002249085.1_ASM224908v1	-	ECPSTH03
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.90881	67	-	MUUR01	197	7549	7118	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001949	GCA_001992855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/855/GCA_001992855.1_ASM199285v1	-	VC13178
Burkholderia pseudomallei MSHR4003	1435369	PRJNA231188	231188	Proteobacteria	Betaproteobacteria	7.24484	68.1	-	JPUZ01	2	7447	6870	11/11/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02948389	GCA_000774395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/395/GCA_000774395.1_BCW_6	25676747	MSHR4003
Chlamydia trachomatis L2b/Canada2	1075086	PRJEA71459	71459	PVC group	Chlamydiae	1.04625	41.2634	chromosome:HE601957.1; plasmid pL2bCan2:HE603224.1	-	2	942	900	3/13/12	2/27/15	Chromosome	Sanger Institute	SAMEA2272225	GCA_000319145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/145/GCA_000319145.1_ASM31914v1	-	L2b/Canada2
Bacillus thuringiensis serovar sylvestriensis	180875	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.00575	35	-	MOOQ01	64	6234	5850	5/17/17	6/15/17	Contig	Huazhong Agricultural University	SAMN05934533	GCA_002147985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/985/GCA_002147985.1_ASM214798v1	-	BGSC 4BY1
Vibrio cholerae O1 str. NHCC-004A	1095655	PRJNA76245	76245	Proteobacteria	Gammaproteobacteria	4.03164	47.5	-	APGA01	86	3841	3679	3/22/13	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00989277	GCA_000348385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/385/GCA_000348385.2_ASM34838v2	-	NHCC-004A
Clostridioides difficile DA00128	1151322	PRJNA85819	85819	Terrabacteria group	Firmicutes	4.21701	28.4	-	AVIX01	95	3929	3719	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766636	GCA_000450005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/005/GCA_000450005.2_ASM45000v2	-	DA00128
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.82572	32.4	-	MRKV01	101	1902	1552	4/19/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773857	GCA_002101045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/045/GCA_002101045.1_ASM210104v1	28348839	FDC306
Brucella abortus 93/1	1160197	PRJNA173619	173619	Proteobacteria	Alphaproteobacteria	3.28543	57.2	-	AQLV01	4	3376	3153	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811172	GCA_000366485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/485/GCA_000366485.1_Bruc_abor_93_1_V1	-	93/1
Xanthomonas oryzae pv. oryzae	64187	PRJNA269484	269484	Proteobacteria	Gammaproteobacteria	4.32571	63.9	-	JXHC01	474	4316	3415	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252545	GCA_001929185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/185/GCA_001929185.1_ASM192918v1	-	IXO812
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.2025	38	-	MLNV01	819	2188	1846	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297087	GCA_001868875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/875/GCA_001868875.1_ASM186887v1	27118061	AWRIB492
Vibrio parahaemolyticus S146	1394680	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.02306	45.3	-	AWIG01	527	4821	4590	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338994	GCA_000489535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/535/GCA_000489535.1_S146	-	S146
Bacillus subtilis subsp. subtilis str. MP11	1310431	PRJNA194425	194425	Terrabacteria group	Firmicutes	3.9308	43.7	-	APMX01	647	4301	3729	11/19/13	3/24/17	Scaffold	University of Copenhagen	SAMN01991282	GCA_000497365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/365/GCA_000497365.1_MP11	24248063	MP11
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28403	32.4	chromosome:AP017578.1	-	1	-	-	1/24/17	1/27/17	Complete Genome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053840	GCA_002357175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/175/GCA_002357175.1_ASM235717v1	-	Nakase
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	4.00865	28.1	-	LFPF01	65	3835	3674	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779992	GCA_001573665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/665/GCA_001573665.1_ASM157366v1	26939550	Walls 8G
Enterococcus faecalis EnGen0095	1157356	PRJNA88213	88213	Terrabacteria group	Firmicutes	3.3235	37.1	-	AIQP01	9	3513	3328	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808919	GCA_000391305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/305/GCA_000391305.1_Ente_faec_B2391_V1	-	B2391
Streptococcus mutans N66	857124	PRJNA49815	49815	Terrabacteria group	Firmicutes	2.00604	36.8	-	AHSM01	113	2028	1941	2/11/13	3/23/17	Contig	Cornell University	SAMN02428933	GCA_000339975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/975/GCA_000339975.1_ASM33997v1	23228887	N66
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.12285	52.6	-	CQKT01	87	2490	2173	3/23/15	4/11/17	Contig	SC	SAMEA1677409	GCA_001125025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/025/GCA_001125025.1_8727_5_58	-	GCGS208
Enterococcus faecium EnGen0034	1138920	PRJNA82491	82491	Terrabacteria group	Firmicutes	3.1327	37.9	-	AHXV01	19	3190	2958	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779835	GCA_000322205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/205/GCA_000322205.1_Ente_faec_E2297_V1	-	E2297
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.7799	66.2	-	JVGN01	28	4341	4235	7/10/15	7/20/16	Scaffold	University of Washington	SAMN03197645	GCA_001073045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/045/GCA_001073045.1_ASM107304v1	26230489	453_SMAL
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15962	41.1	-	CVZY01	75	2103	1927	6/23/15	3/26/17	Contig	SC	SAMEA1032907	GCA_001177485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/485/GCA_001177485.1_6903_2_24	-	EQUI0074
Brucella melitensis	29459	PRJNA339926	339926	Proteobacteria	Alphaproteobacteria	3.28429	57.3	-	MIJP01	29	3346	3132	10/28/16	4/5/17	Contig	NCDC	SAMN05615423	GCA_001856295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/295/GCA_001856295.1_ASM185629v1	-	Br.m-1252/10-Geo
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28404	32.4	chromosome:AP017577.1	-	1	-	-	1/24/17	1/27/17	Complete Genome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053846	GCA_002357195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/195/GCA_002357195.1_ASM235719v1	-	MZ08014
Corynebacterium diphtheriae bv. belfanti	2014537	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.44519	53.6	-	LSYD01	40	2390	2180	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497027	GCA_002203175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/175/GCA_002203175.1_S128	-	1556
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.49605	46.9	-	CTJL01	248	4222	3959	3/26/15	3/26/17	Scaffold	SC	SAMEA980161	GCA_001219325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/325/GCA_001219325.1_4976_1_7	-	YE11/03
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.05382	60	-	FCMS01	22	4786	4639	1/21/16	3/27/17	Scaffold	SC	SAMEA2274071	GCA_001536565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/565/GCA_001536565.1_12082_5_49	-	2880STDY5682999
Lactobacillus plantarum	1590	PRJNA283610	283610	Terrabacteria group	Firmicutes	3.30186	44.3	-	LEBR01	74	3187	3017	12/3/16	3/28/17	Contig	"Faculty of Agro-industry, Prince of Songkla University, wageningen university"	SAMN03654466	GCA_001888255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/255/GCA_001888255.1_ASM188825v1	-	P22
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.84619	31.1	-	LBEL01	85	1947	1827	10/27/15	3/18/17	Contig	FDA	SAMN03344553	GCA_001416755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/755/GCA_001416755.1_ASM141675v1	-	CVM N44721
Burkholderia sp. JGI 0001021-N20	1268333	PRJNA183567	183567	Proteobacteria	Betaproteobacteria	0.394324	59.9	-	AXYH01	87	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441100	GCA_000485355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/355/GCA_000485355.1_ASM48535v1	-	JGI 0001021-N20
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.47355	32.7	-	CUHJ01	88	2480	2343	3/31/15	4/21/17	Scaffold	SC	SAMEA1035149	GCA_001232645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/645/GCA_001232645.1_7068_7_61	-	135073
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.58312	56.6	-	MRXN01	27	4439	4248	3/31/17	4/6/17	Scaffold	FDA/CFSAN	SAMN06124504	GCA_002075645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/645/GCA_002075645.1_ASM207564v1	-	MOD1-A31815
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.02558	64.2	-	FVAQ01	8	5044	4921	3/10/17	3/18/17	Contig	SC	SAMEA2070421	GCA_900130385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/385/GCA_900130385.1_10625_5_73	-	158
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.20721	67.1	-	LPDW01	159	7585	7174	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449442	GCA_001529065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/065/GCA_001529065.1_ASM152906v1	-	MSMB1174WGS
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.26417	38.8	-	NGIL01	116	4157	3927	5/16/17	5/24/17	Contig	JCVI	SAMN06892313	GCA_002145235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/145/235/GCA_002145235.1_ASM214523v1	-	ARLG1937
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.97361	55.2	-	LEDJ01	106	4926	4656	6/9/15	3/26/17	Contig	JCVI	SAMN03732721	GCA_001022775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/775/GCA_001022775.1_ASM102277v1	-	GN02667
Klebsiella aerogenes	548	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.91926	55.3	-	FKCM01	77	4914	4615	4/6/16	4/17/17	Scaffold	SC	SAMEA2273465	GCA_900076735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/735/GCA_900076735.1_12045_5_45	-	e2722
Pseudomonas sp. GM102	1144321	PRJNA83065	83065	Proteobacteria	Gammaproteobacteria	6.65735	59	-	AKJB01	159	6106	5882	7/27/12	5/19/17	Contig	Oak Ridge National Lab	SAMN00839629	GCA_000282555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/555/GCA_000282555.1_Pseudomonas.strGM102_v1.0	23045501	GM102
Streptomyces sp. LaPpAH-95	1157632	PRJNA169759	169759	Terrabacteria group	Actinobacteria	7.56459	71.9	-	AQWQ01	34	6805	6606	4/20/13	5/19/17	Contig	DOE Joint Genome Institute	SAMN02441060	GCA_000375725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/725/GCA_000375725.1_ASM37572v1	-	LaPpAH-95
Bacillus sp. F56	1581850	PRJDB4880	339263	Terrabacteria group	Firmicutes	4.01847	43.8	-	BDFC01	17	4165	3965	8/11/16	4/13/17	Contig	National Institute of Technology and Evaluation Biological Resource Center	SAMD00053329	GCA_001748205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/205/GCA_001748205.1_ASM174820v1	-	F56
Acinetobacter sp. NBRC 110496	1550715	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	4.40306	41	-	BBTF01	165	4249	3979	2/10/15	4/6/17	Contig	National Institute of Technology and Evaluation	SAMD00020359	GCA_000876115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/115/GCA_000876115.1_ASM87611v1	-	NBRC 110496
Clostridium sp. CAG:299	1262792	PRJEB817	206824	Terrabacteria group	Firmicutes	2.7251	49.5	-	CBGZ01	149	2474	2441	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138669	GCA_000435655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/655/GCA_000435655.1_MGS299	-	-
Rhodococcus sp. JCM 3009	1303684	PRJDB941	245962	Terrabacteria group	Actinobacteria	8.21447	66.1	-	BBFZ01	3882	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016948	GCA_001313505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/505/GCA_001313505.1_ASM131350v1	-	JCM 3009
Enterobacter sp. NFIX08	1566254	PRJEB17223	351447	Proteobacteria	Gammaproteobacteria	5.59774	54	-	FOYJ01	27	5388	5148	11/1/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159514	GCA_900115965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/965/GCA_900115965.1_IMG-taxon_2600255256_annotated_assembly	-	NFIX08
Staphylococcus sp. HMSC067F07	1715185	PRJNA296313	296313	Terrabacteria group	Firmicutes	2.46911	32.7	-	LTPG01	42	2378	2294	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498694	GCA_001837405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/405/GCA_001837405.1_ASM183740v1	-	HMSC067F07
Streptococcus sp. CCH8-G7	1768771	PRJNA299404	299404	Terrabacteria group	Firmicutes	1.97819	40.4	-	LSJE01	121	1912	1823	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299455	GCA_001556605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/605/GCA_001556605.1_ASM155660v1	-	CCH8-G7
Prevotella sp. UBA2750	1947109	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.32088	46.7	-	DEJK01	46	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06453245	GCA_002353355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/355/GCA_002353355.1_ASM235335v1	28894102	-
Mycobacterium sp. 1164985.4	1834069	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.48133	67	-	LZMD01	117	5252	5037	6/17/16	4/12/17	Contig	JCVI	SAMN04634188	GCA_001668575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/668/575/GCA_001668575.1_ASM166857v1	-	1164985.4
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28403	32.4	chromosome:AP017576.1	-	1	-	-	1/24/17	1/27/17	Complete Genome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053845	GCA_002357215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/215/GCA_002357215.1_ASM235721v1	-	HH07167
Prochlorococcus sp. scB245a_521N5	1471530	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.830606	31.4	-	JFOC01	425	-	-	4/22/14	4/28/14	Contig	Massachusetts Institute of Technology	SAMN02671401	GCA_000635875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/875/GCA_000635875.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Prochlorococcus sp. TMED223	1986612	PRJNA385857	385857	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.71836	47.6	-	NHJU01	121	1806	1736	6/5/17	6/5/17	Contig	University of Southern California	SAMN06972077	GCA_002169575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/169/575/GCA_002169575.1_ASM216957v1	-	-
Paenibacillus sp. ICGEB2008	996640	PRJNA174729	174729	Terrabacteria group	Firmicutes	5.69144	45.5	-	AMQU01	79	4957	4545	10/22/12	4/17/15	Contig	International Centre for Genetic Engineering and Biotechnology	SAMN02472260	GCA_000307675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/675/GCA_000307675.1_PaenICGEB1.0	23405362	ICGEB2008
Mycobacterium sp. 1274761.0	1834077	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.07812	66.1	-	LZMC01	113	4952	4731	6/17/16	4/12/17	Contig	JCVI	SAMN04634189	GCA_001668615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/668/615/GCA_001668615.1_ASM166861v1	-	1274761
Prevotella sp. UBA2747	1947108	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.61342	49.6	-	DEJN01	122	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06452202	GCA_002353365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/365/GCA_002353365.1_ASM235336v1	28894102	-
Streptococcus sp. CCH8-C6	1768777	PRJNA299404	299404	Terrabacteria group	Firmicutes	1.79099	43.1	-	LSJN01	85	1771	1680	2/10/16	4/11/17	Contig	Georgia Institute of Technology	SAMN04299464	GCA_001557225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/225/GCA_001557225.1_ASM155722v1	-	CCH8-C6
Staphylococcus sp. HMSC067G10	1715028	PRJNA296155	296155	Terrabacteria group	Firmicutes	2.58547	32.5	-	LTPF01	114	2539	2417	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498568	GCA_001837415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/415/GCA_001837415.1_ASM183741v1	-	HMSC067G10
Enterobacter sp. kpr-6	1761782	PRJEB17309	351530	Proteobacteria	Gammaproteobacteria	4.48322	55	-	FOYH01	18	4264	4098	11/1/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487773	GCA_900116015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/015/GCA_900116015.1_IMG-taxon_2608642189_annotated_assembly	-	KPR-6
Clostridium sp. CAG:508	1262815	PRJEB909	206944	Terrabacteria group	Firmicutes	1.09975	29	-	CBFC01	44	1109	1078	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138674	GCA_000435755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/755/GCA_000435755.1_MGS508	-	-
Acinetobacter sp. Ag2	1646532	PRJNA282043	282043	Proteobacteria	Gammaproteobacteria	4.43429	37.9	-	LBNA01	59	4174	4002	5/8/15	4/6/17	Contig	New Mexico State University	SAMN03565819	GCA_001005515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/515/GCA_001005515.1_ASM100551v1	-	Ag2
Bacillus sp. RZ2MS9	1806216	PRJNA343080	343080	Terrabacteria group	Firmicutes	5.2976	35	-	MJBF01	33	5681	5331	10/21/16	4/13/17	Contig	ESALQ/USP	SAMN05773345	GCA_001816185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/185/GCA_001816185.1_ASM181618v1	-	RZ2MS9
Streptomyces sp. DvalAA-83	1155717	PRJNA169752	169752	Terrabacteria group	Actinobacteria	7.45286	71.8	-	ARPI01	31	6667	6390	4/25/13	3/9/17	Contig	DOE Joint Genome Institute	SAMN02441645	GCA_000382745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/745/GCA_000382745.1_ASM38274v1	-	DvalAA-83
Pseudomonas sp. S13.1.2	1217722	PRJNA171728	171728	Proteobacteria	Gammaproteobacteria	4.95585	62	-	ALPA01	337	4674	4449	8/20/12	5/19/17	Contig	University of Malaya	SAMN02471844	GCA_000292285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/285/GCA_000292285.1_ASM29228v1	-	S13.1.2
Klebsiella aerogenes	548	PRJEB17905	353823	Proteobacteria	Gammaproteobacteria	5.1528	55.2	-	FPJK01	20	5109	4890	11/17/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03097705	GCA_900119335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/335/GCA_900119335.1_IMG-taxon_2602042109_annotated_assembly	-	NFIX39
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.66847	55.7	-	LEDG01	28	4491	4340	6/9/15	3/26/17	Contig	JCVI	SAMN03732725	GCA_001022835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/835/GCA_001022835.1_ASM102283v1	-	GN02767
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.02031	38.7	-	NGIO01	45	3931	3765	5/16/17	5/24/17	Contig	JCVI	SAMN06892309	GCA_002145265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/145/265/GCA_002145265.1_ASM214526v1	-	ARLG1942
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.62026	67.2	-	LPDY01	137	6929	6525	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449444	GCA_001529085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/085/GCA_001529085.1_ASM152908v1	-	MSMB1178WGS
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.61074	59.9	-	DFMQ01	12	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452534	GCA_002375735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/735/GCA_002375735.1_ASM237573v1	28894102	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.24155	64.2	-	FRYS01	25	5254	5107	12/14/16	3/21/17	Contig	SC	SAMEA2071250	GCA_900130395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/395/GCA_900130395.1_10625_5_75	-	160
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.62463	56.5	-	MRXO01	28	4478	4290	3/31/17	4/6/17	Scaffold	FDA/CFSAN	SAMN06124516	GCA_002075655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/655/GCA_002075655.1_ASM207565v1	-	MOD1-H951
Enterobacter cloacae subsp. cloacae SY-70	1449089	PRJNA235141	235141	Proteobacteria	Gammaproteobacteria	5.07506	55.4	-	JALR01	184	5047	4666	2/6/14	3/24/17	Scaffold	China CDC	SAMN02582420	GCA_000564975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/975/GCA_000564975.1_version_1.0_of_Enterobacter_cloacae_subsp._cloacae_SY-70_Genome_sequencing	-	SY-70
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.45338	32.7	-	CUEF01	65	2404	2280	3/31/15	3/26/17	Scaffold	SC	SAMEA1035084	GCA_001233165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/165/GCA_001233165.1_7067_4_73	-	51-72
Burkholderia sp. JGI 001013-G13	1167739	PRJNA175210	175210	Proteobacteria	Betaproteobacteria	0.362705	60.1	-	AYGV01	48	-	-	10/28/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441081	GCA_000493855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/855/GCA_000493855.1_ASM49385v1	-	JGI 001013-G13
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.8427	31.1	-	LBEJ01	84	1952	1827	10/27/15	3/18/17	Contig	FDA	SAMN03344555	GCA_001416765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/765/GCA_001416765.1_ASM141676v1	-	CVM N46876
Lactobacillus plantarum	1590	PRJNA283610	283610	Terrabacteria group	Firmicutes	3.49224	44.1	-	LEBT01	92	3451	3216	12/3/16	3/28/17	Contig	"Faculty of Agro-industry, Prince of Songkla University, wageningen university"	SAMN03654461	GCA_001888265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/265/GCA_001888265.1_ASM188826v1	-	K35
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.12511	60	-	FCMK01	15	4877	4714	1/21/16	3/27/17	Scaffold	SC	SAMEA2273994	GCA_001536585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/585/GCA_001536585.1_12082_5_39	-	2880STDY5682922
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.49694	46.9	-	CTKO01	226	4252	3983	3/26/15	3/26/17	Scaffold	SC	SAMEA980165	GCA_001219345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/345/GCA_001219345.1_4976_1_3	-	YE24/03
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.45988	53.5	-	LSYE01	25	2376	2205	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497037	GCA_002203215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/215/GCA_002203215.1_S130	-	1854
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28401	32.4	chromosome:AP017575.1	-	1	-	-	1/24/17	1/27/17	Complete Genome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053844	GCA_002357235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/235/GCA_002357235.1_ASM235723v1	-	HH07124
Brucella melitensis	29459	PRJNA339926	339926	Proteobacteria	Alphaproteobacteria	3.28615	57.3	-	MIJQ01	32	3346	3131	10/28/16	4/5/17	Contig	NCDC	SAMN05615424	GCA_001856365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/365/GCA_001856365.1_ASM185636v1	-	Br.m-1268/11-Geo
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12947	41.2	-	CWBT01	81	2063	1885	6/24/15	3/26/17	Contig	SC	SAMEA1032908	GCA_001177505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/505/GCA_001177505.1_6903_5_78	-	EQUI0127
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.56987	66.4	-	JVDZ01	108	4132	4030	7/10/15	7/20/16	Scaffold	University of Washington	SAMN03197711	GCA_001073225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/225/GCA_001073225.1_ASM107322v1	26230489	517_SMAL
Enterococcus faecium EnGen0038	1138921	PRJNA82493	82493	Terrabacteria group	Firmicutes	2.80934	38.3	-	AHXW01	4	2843	2580	12/17/12	4/10/17	Scaffold	Broad Institute	SAMN00779836	GCA_000322225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/225/GCA_000322225.1_Ente_faec_E2620_V1	-	E2620
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.15138	52.4	-	CQOZ01	79	2527	2210	3/23/15	4/11/17	Contig	SC	SAMEA1690490	GCA_001125445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/445/GCA_001125445.1_8727_8_26	-	GCGS122
Streptococcus mutans W6	857122	PRJNA49819	49819	Terrabacteria group	Firmicutes	1.99136	36.6	-	AHSO01	114	1980	1892	2/11/13	3/23/17	Contig	Cornell University	SAMN02429078	GCA_000339995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/339/995/GCA_000339995.1_ASM33999v1	23228887	W6
Enterococcus faecalis EnGen0096	1157357	PRJNA88215	88215	Terrabacteria group	Firmicutes	3.34585	37.1	-	AIQQ01	11	3532	3356	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808920	GCA_000391325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/325/GCA_000391325.1_Ente_faec_B2488_V1	-	B2488
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.80811	27.1	-	LFPG01	72	3472	3315	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779996	GCA_001573695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/695/GCA_001573695.1_ASM157369v1	26939550	ATCC 9564
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28403	32.4	chromosome:AP017574.1	-	1	-	-	1/24/17	1/27/17	Complete Genome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053843	GCA_002357255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/255/GCA_002357255.1_ASM235725v1	-	HH06154
Bacillus subtilis subsp. subtilis str. 168	224308	PRJNA248606	248606	Terrabacteria group	Firmicutes	4.17073	43.4	-	JNCM01	36	4369	4254	5/30/14	3/24/17	Scaffold	Tianjin university	SAMN02799703	GCA_000696635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/635/GCA_000696635.1_ASM69663v1	25620468	168
Vibrio parahaemolyticus S145	1394679	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.16997	45.4	-	AWIH01	455	4915	4687	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338993	GCA_000489555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/555/GCA_000489555.1_S145	-	S145
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.87542	37.9	-	MLNW01	254	1927	1687	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297088	GCA_001868905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/905/GCA_001868905.1_ASM186890v1	27118061	AWRIB494
Xanthomonas oryzae pv. oryzae	64187	PRJNA269486	269486	Proteobacteria	Gammaproteobacteria	4.32474	63.9	-	JXHE01	450	4316	3453	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252548	GCA_001929225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/225/GCA_001929225.1_ASM192922v1	-	IXO884
Brucella abortus CNGB 1011	1198692	PRJNA176532	176532	Proteobacteria	Alphaproteobacteria	3.286	57.2	-	AQLW01	2	3376	3151	4/16/13	3/23/17	Contig	Broad Institute	SAMN01047743	GCA_000366505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/505/GCA_000366505.1_Bruc_abor_CNGB_1011_V1	-	CNGB 1011
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.77807	32.2	-	MRKW01	127	1835	1554	4/19/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773856	GCA_002101085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/085/GCA_002101085.1_ASM210108v1	28348839	FDC305
Clostridioides difficile DA00129	1151323	PRJNA85821	85821	Terrabacteria group	Firmicutes	4.19354	28.3	-	AVIY01	73	3968	3756	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766637	GCA_000450025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/025/GCA_000450025.2_ASM45002v2	-	DA00129
Vibrio cholerae O1 str. NHCC-006C	1095656	PRJNA76247	76247	Proteobacteria	Gammaproteobacteria	4.02824	47.5	-	APGB01	86	3837	3678	3/22/13	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00989308	GCA_000348405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/405/GCA_000348405.2_ASM34840v2	-	NHCC-006C
Bacillus thuringiensis serovar palmanyolensis	180895	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.2048	34.9	-	MOOM01	128	6579	6039	5/17/17	5/24/17	Contig	Huazhong Agricultural University	SAMN05934527	GCA_002148015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/015/GCA_002148015.1_ASM214801v1	-	BGSC 4BS1
Chlamydia trachomatis L1/1322/p2	1075087	PRJEA71461	71461	PVC group	Chlamydiae	1.04693	41.2642	chromosome:HE601951.1; plasmid pL11322:HE603219.1	-	2	942	898	3/13/12	2/27/15	Chromosome	Sanger Institute	SAMEA2272713	GCA_000319165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/165/GCA_000319165.1_ASM31916v1	-	L1/1322/p2
Burkholderia pseudomallei ABCPW 91	1434209	PRJNA230743	230743	Proteobacteria	Betaproteobacteria	7.2757	68.1	-	JPUY01	2	7499	6971	11/11/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02948388	GCA_000774405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/405/GCA_000774405.1_BCW_25	25676747	ABCPW 91
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.14817	66.9	-	MUUV01	285	7926	7352	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001954	GCA_001992875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/875/GCA_001992875.1_ASM199287v1	-	VC7722
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.89642	50.6	-	NQLI01	150	5122	4677	8/14/17	8/16/17	Contig	JCVI	SAMN07450611	GCA_002251815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/815/GCA_002251815.1_ASM225181v1	-	ECCTRSRTH08
Legionella pneumophila	446	PRJDB3521	276029	Proteobacteria	Gammaproteobacteria	3.68928	38.3	-	BBUJ01	54	3390	3222	2/26/15	3/25/17	Contig	Yamaguchi University	SAMD00025832	GCA_000953915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/915/GCA_000953915.1_ASM95391v1	25977442	Ymg289
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.2111	58.6	-	MTYS01	245	6061	5483	4/27/17	5/3/17	Contig	Massey University	SAMN06197075	GCA_002111805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/805/GCA_002111805.1_ASM211180v1	28369338	J38
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.00377	41.3	-	CECP01	56	2026	1931	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233872	GCA_000937295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/295/GCA_000937295.1_Velvet_assembly	-	LL-Q
Streptococcus agalactiae MRI Z1-216	1154879	PRJNA86417	86417	Terrabacteria group	Firmicutes	2.38905	35.7	-	ALSF01	86	2517	2283	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993330	GCA_000289415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/415/GCA_000289415.1_ASM28941v1	-	MRI Z1-216
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	4.04609	38.9	-	JSCS01	74	3944	3790	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068258	GCA_000804875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/875/GCA_000804875.1_ASM80487v1	25487793	2011SDAB3
Pseudomonas aeruginosa CF77	1402579	PRJNA219941	219941	Proteobacteria	Gammaproteobacteria	7.02819	65.8	-	AXOO01	14	6651	6427	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360751	GCA_000480375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/375/GCA_000480375.1_Pseu_aeru_CF77_V1	-	CF77
Shigella flexneri 2001004	1434158	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.44618	50.5	-	AZPK01	291	4988	4271	1/29/14	2/23/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437393	GCA_000566105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/105/GCA_000566105.1_ASM56610v1	-	2001004
Bacillus anthracis	1392	PRJNA264742	264742	Terrabacteria group	Firmicutes	5.44555	35.1	-	JTAR01	51	6041	5709	11/14/14	3/25/17	Scaffold	Georgia Institute of Technology	SAMN03165113	GCA_000782895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/895/GCA_000782895.1_ASM78289v1	-	2000031027
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.62036	34.9	-	JQOO01	255	4201	3823	2/24/16	3/27/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949560	GCA_001567655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/655/GCA_001567655.1_ASM156765v1	26833181	56673
Streptococcus pyogenes ABC020057192	1439284	PRJNA233102	233102	Terrabacteria group	Firmicutes	1.89515	38.5	-	JJHP01	2	1975	1843	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567451	GCA_000630965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/965/GCA_000630965.1_Stre_pyog_ABC020057192_V1	-	ABC020057192
Neisseria meningitidis NM220	1053687	PRJNA68835	68835	Proteobacteria	Betaproteobacteria	2.01769	52	-	AGRR01	339	2253	1988	1/13/12	3/15/17	Contig	University of Pittsburgh School of Medicine	SAMN02471929	GCA_000242755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/755/GCA_000242755.2_ASM24275v2	22558202	NM220
Helicobacter pylori GAM121Aii	1159030	PRJNA89231	89231	Proteobacteria	delta/epsilon subdivisions	1.66085	39.2	-	APDG01	50	1651	1489	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436859	GCA_000345145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/145/GCA_000345145.2_ASM34514v2	-	GAM121Aii
Streptococcus pneumoniae 6963-05	760865	PRJNA48923	48923	Terrabacteria group	Firmicutes	2.11495	39.7	-	AGON01	16	2299	2026	10/25/11	3/9/17	Contig	Institute for Genome Sciences	SAMN00792787	GCA_000232325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/325/GCA_000232325.2_ASM23232v2	-	6963-05
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28394	32.4	chromosome:AP017573.1	-	1	-	-	1/24/17	1/27/17	Complete Genome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053841	GCA_002357275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/275/GCA_002357275.1_ASM235727v1	-	HH-1
Mycobacterium tuberculosis PanR0409	1346768	PRJNA208602	208602	Terrabacteria group	Actinobacteria	4.40259	65.4997	chromosome:NZ_CM002061.1/CM002061.1	ATEA01	1	4294	4081	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471070	GCA_000443505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/505/GCA_000443505.1_fedora0409_IS	23884993	PanR0409
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.83002	37.9	-	FFIJ01	20	1848	1699	2/9/16	3/27/17	Scaffold	SC	SAMEA2674746	GCA_900036645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/645/GCA_900036645.1_14412_4_29	-	2842STDY5882057
Mycobacterium avium	1764	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.40979	69	-	NSEX01	103	5104	4876	9/12/17	9/14/17	Contig	University of Michigan Medical School	SAMN07528795	GCA_002292425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/425/GCA_002292425.1_ASM229242v1	-	FLAC0346
Bacillus cereus HuB2-9	1053209	PRJNA70383	70383	Terrabacteria group	Firmicutes	5.76967	35.2	-	AHED01	7	6053	5672	8/27/12	6/15/17	Scaffold	Broad Institute	SAMN02596841	GCA_000293745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/745/GCA_000293745.1_Baci_cere_HuB2-9_V1	-	HuB2-9
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.53413	31.9	-	JUPD01	191	2499	2413	7/10/15	3/26/17	Contig	University of Washington	SAMN03198097	GCA_001074875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/875/GCA_001074875.1_ASM107487v1	26230489	890_SEPI
Rickettsia japonica	35790	PRJDB4932	368677	Proteobacteria	Alphaproteobacteria	1.28403	32.4	chromosome:AP017572.1	-	1	-	-	1/24/17	1/27/17	Complete Genome	"Department of Microbiology, Graduate School of Medical and Dental Sciences, Kagoshima University"	SAMD00053839	GCA_002357295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/357/295/GCA_002357295.1_ASM235729v1	-	DT-1
Yersinia pestis PY-45	992150	PRJNA64327	64327	Proteobacteria	Gammaproteobacteria	4.75454	47.5	-	AKSJ01	471	4627	4274	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141471	GCA_000268745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/745/GCA_000268745.1_ASM26874v1	-	PY-45
Campylobacter jejuni	197	PRJNA404064	404064	Proteobacteria	delta/epsilon subdivisions	1.8696	30.3	chromosome:CP023446.1; plasmid pJc100:CP023447.1	-	2	1912	1867	9/25/17	9/25/17	Chromosome	Universidade Federal de Pelotas	SAMN07629443	GCA_002355255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/255/GCA_002355255.1_ASM235525v1	-	100
Rickettsia rickettsii	783	PRJNA357110	357110	Proteobacteria	Alphaproteobacteria	1.26822	32.4	chromosome:NZ_CP018913.1/CP018913.1	-	1	1540	1260	1/12/17	4/6/17	Complete Genome	NIAID	SAMN06133288	GCA_001950995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/995/GCA_001950995.1_ASM195099v1	-	Iowa
Rickettsia rickettsii	783	PRJNA357110	357110	Proteobacteria	Alphaproteobacteria	1.26824	32.4	chromosome:NZ_CP018914.1/CP018914.1	-	1	1540	1260	1/12/17	4/6/17	Complete Genome	NIAID	SAMN06133287	GCA_001951015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/015/GCA_001951015.1_ASM195101v1	-	Iowa
Francisella tularensis subsp. novicida	264	PRJNA260088	260088	Proteobacteria	Gammaproteobacteria	1.91646	32.4	chromosome:NZ_CP009653.1/CP009653.1	-	1	1851	1754	11/17/16	4/5/17	Complete Genome	Los Alamos National Laboratory	SAMN03107513	GCA_001880205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/205/GCA_001880205.1_ASM188020v1	-	AL97-2214
Francisella tularensis subsp. novicida PA10-7858	1386968	PRJNA215224	215224	Proteobacteria	Gammaproteobacteria	1.97896	32.4	chromosome:NZ_CP016635.1/CP016635.1	-	1	1935	1822	11/3/16	4/5/17	Complete Genome	Los Alamos National Laboratory	SAMN05449121	GCA_001865695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/695/GCA_001865695.1_ASM186569v1	-	PA10-7858
Campylobacter jejuni subsp. jejuni 1336	683082	PRJNA33777	33777	Proteobacteria	delta/epsilon subdivisions	1.70283	30.3513	chromosome:NZ_CM000854.1/CM000854.1	ADGL01	1	3570	3355	1/12/10	4/10/17	Chromosome	University of Liverpool	SAMN02471182	GCA_000163975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/975/GCA_000163975.1_ASM16397v1	21418497	1336
Yersinia pestis PY-48	992153	PRJNA64333	64333	Proteobacteria	Gammaproteobacteria	4.63049	47.5	-	AKSM01	584	4530	4167	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141474	GCA_000268765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/765/GCA_000268765.1_ASM26876v1	-	PY-48
Rickettsia monacensis	109232	PRJEB4369	221848	Proteobacteria	Alphaproteobacteria	1.35345	32.4	chromosome I:NZ_LN794217.1/LN794217.1	-	1	1609	1228	1/22/15	9/18/17	Complete Genome	UMENT	SAMEA4532341	GCA_000499665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/665/GCA_000499665.2_RMONA_1	-	IrR/Munich
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.41043	31.9	-	JURQ01	149	2364	2250	7/10/15	3/26/17	Contig	University of Washington	SAMN03198032	GCA_001075095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/095/GCA_001075095.1_ASM107509v1	26230489	818_SEPI
Bacillus cereus TIAC219	718222	PRJNA70291	70291	Terrabacteria group	Firmicutes	6.82029	35	-	AHCJ01	37	7046	6565	5/16/13	3/24/17	Scaffold	Broad Institute	SAMN02596795	GCA_000398785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/785/GCA_000398785.1_Baci_cere_TIAC219_V2	-	TIAC219
Mycobacterium avium	1764	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.60501	68.9	-	NSFA01	120	5321	5026	9/12/17	9/14/17	Contig	University of Michigan Medical School	SAMN07528792	GCA_002292435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/435/GCA_002292435.1_ASM229243v1	-	FLAC0256
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.80441	38	-	FFJG01	19	1817	1691	2/9/16	3/27/17	Scaffold	SC	SAMEA2674754	GCA_900037345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/345/GCA_900037345.1_14412_4_37	-	2842STDY5882065
Mycobacterium tuberculosis PanR0407	1346770	PRJNA208600	208600	Terrabacteria group	Actinobacteria	4.40515	64.9956	chromosome:NZ_CM002062.1/CM002062.1	ATEB01	1	4319	3817	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471043	GCA_000443525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/525/GCA_000443525.1_fedora0407b_IS	23884993	PanR0407
Flavobacterium psychrophilum	96345	PRJNA254457	254457	FCB group	Bacteroidetes/Chlorobi group	2.73629	32.4	chromosome:NZ_CP008902.1/CP008902.1	-	1	2480	2402	10/16/14	4/2/17	Complete Genome	University of Copenhagen	SAMN02903962	GCA_000767095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/095/GCA_000767095.1_ASM76709v1	-	950106-1/1
Streptococcus pneumoniae GA44378	760823	PRJNA48835	48835	Terrabacteria group	Firmicutes	2.2106	39.6	-	AGOQ01	11	2395	2100	10/25/11	3/8/17	Contig	Institute for Genome Sciences	SAMN00792793	GCA_000232385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/385/GCA_000232385.2_ASM23238v2	-	GA44378
Helicobacter pylori GAM210Bi	1159032	PRJNA89235	89235	Proteobacteria	delta/epsilon subdivisions	1.61658	39.2	-	APDH01	50	1588	1427	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436917	GCA_000345165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/165/GCA_000345165.2_ASM34516v2	-	GAM210Bi
Neisseria meningitidis DE9686	1123520	PRJNA78225	78225	Proteobacteria	Betaproteobacteria	2.1419	51.7	-	AJJW01	152	2514	2093	6/5/12	4/11/17	Contig	University of Würzburg	SAMN02472026	GCA_000265135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/135/GCA_000265135.1_ASM26513v1	22461678	DE9686
Streptococcus pyogenes ABC020052497	1439216	PRJNA233100	233100	Terrabacteria group	Firmicutes	1.88355	38.5	-	JJHQ01	9	1954	1826	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567449	GCA_000630985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/630/985/GCA_000630985.1_Stre_pyog_ABC020052497_V1	-	ABC020052497
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.61842	34.9	-	JQON01	235	4191	3816	2/24/16	3/27/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949559	GCA_001567675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/675/GCA_001567675.1_ASM156767v1	26833181	56666
Bacillus anthracis	1392	PRJNA264742	264742	Terrabacteria group	Firmicutes	5.43107	35.1	-	JSZQ01	48	6059	5669	11/14/14	3/25/17	Scaffold	Georgia Institute of Technology	SAMN03165115	GCA_000782905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/905/GCA_000782905.1_ASM78290v1	-	2000031038
Shigella flexneri 2001042	1434159	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.48944	50.5	-	AZPL01	305	4974	4186	1/29/14	3/5/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437394	GCA_000566125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/125/GCA_000566125.1_ASM56612v1	-	2001042
Pseudomonas aeruginosa C52	1402578	PRJNA219940	219940	Proteobacteria	Gammaproteobacteria	7.10218	65.8	-	AXOP01	8	6743	6541	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360750	GCA_000480395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/395/GCA_000480395.1_Pseu_aeru_3572_V1	-	C52
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	3.92305	38.9	-	JSCT01	57	3805	3653	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068260	GCA_000804885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/885/GCA_000804885.1_ASM80488v1	25487793	2011LNAB1
Streptococcus agalactiae str. Gottschalk 1005B	1154889	PRJNA86441	86441	Terrabacteria group	Firmicutes	2.12523	35.3	-	ALSJ01	60	2220	2074	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991146	GCA_000289435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/435/GCA_000289435.1_ASM28943v1	-	Gottschalk 1005B
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.24172	41.3	-	CEEN01	130	2168	2065	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233930	GCA_000937315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/315/GCA_000937315.1_Velvet_assembly	-	LS5U
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.30449	58.4	-	MTYW01	330	6123	5511	4/27/17	5/3/17	Contig	Massey University	SAMN06197080	GCA_002111885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/885/GCA_002111885.1_ASM211188v1	28369338	K7
Legionella pneumophila	446	PRJDB3521	276029	Proteobacteria	Gammaproteobacteria	3.40039	38.4	-	BBUK01	141	3192	2943	2/26/15	3/25/17	Contig	Yamaguchi University	SAMD00025833	GCA_000953935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/935/GCA_000953935.1_ASM95393v1	25977442	Ymt294
Shigella sonnei	624	PRJNA340051	340051	Proteobacteria	Gammaproteobacteria	4.65075	51	-	MEGV01	645	5279	4146	9/6/17	9/8/17	Contig	National University of Sciences and Technology (NUST)	SAMN05631016	GCA_002287145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/145/GCA_002287145.1_ASM228714v1	-	PK-01
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.19102	66.9	-	MUUU01	216	7914	7367	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001953	GCA_001992895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/895/GCA_001992895.1_ASM199289v1	-	VC7718
Burkholderia pseudomallei MSHR4308	1434197	PRJNA230727	230727	Proteobacteria	Betaproteobacteria	7.23014	68.1	-	JPVB01	2	7405	6821	11/11/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02948391	GCA_000774415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/415/GCA_000774415.1_BCW_14	25676747	MSHR4308
Chlamydia trachomatis	813	PRJNA328474	328474	PVC group	Chlamydiae	1.05185	41.165	chromosome:CP016418.1; plasmid unnamed1:CP016419.1	-	2	985	680	9/16/16	9/16/16	Chromosome	London School of Hygiene & Tropical Medicine	SAMN05372048	GCA_001729825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/825/GCA_001729825.1_ASM172982v1	-	SB002739
Bacillus thuringiensis	1428	PRJNA387206	387206	Terrabacteria group	Firmicutes	6.52855	34.7	-	NHPK01	222	6819	6296	8/24/17	8/27/17	Contig	"Institute of Plant Protection, Chinese Academy of Agricultural Sciences"	SAMN07141968	GCA_002268645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/645/GCA_002268645.1_ASM226864v1	-	1126_1
Vibrio cholerae O1 str. NHCC-008D	1095657	PRJNA76249	76249	Proteobacteria	Gammaproteobacteria	3.97158	47.6	-	APGC01	81	3806	3590	3/22/13	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00989276	GCA_000348425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/425/GCA_000348425.2_ASM34842v2	-	NHCC-008D
Clostridioides difficile DA00131	1151325	PRJNA85825	85825	Terrabacteria group	Firmicutes	4.08032	28.4	-	AVIZ01	140	3839	3616	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766639	GCA_000450045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/045/GCA_000450045.2_ASM45004v2	-	DA00131
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.76464	32.3	-	MRKX01	244	1837	1520	4/19/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773855	GCA_002101095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/095/GCA_002101095.1_ASM210109v1	28348839	FDC304
Brucella abortus CNGB 1432	1198693	PRJNA176533	176533	Proteobacteria	Alphaproteobacteria	3.28376	57.2	-	AQLX01	4	3375	3150	4/16/13	3/23/17	Contig	Broad Institute	SAMN01047744	GCA_000366525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/525/GCA_000366525.1_Bruc_abor_CNGB_1432_V1	-	CNGB 1432
Xanthomonas oryzae pv. oryzae	64187	PRJNA269487	269487	Proteobacteria	Gammaproteobacteria	4.40119	63.8	-	JXHF01	475	4366	3530	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252586	GCA_001929235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/235/GCA_001929235.1_ASM192923v1	-	IXO1088
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.02128	38	-	MLNZ01	337	2109	1841	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297091	GCA_001868915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/915/GCA_001868915.1_ASM186891v1	27118061	AWRIB509
Vibrio parahaemolyticus S144	1394678	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.06351	45.3	-	AWII01	474	4812	4589	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338992	GCA_000489575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/575/GCA_000489575.1_S144	-	S144
Bacillus subtilis	1423	PRJNA255532	255532	Terrabacteria group	Firmicutes	3.95196	46.3	-	JPYY01	22	3886	3729	8/15/14	3/24/17	Scaffold	"Institute of Subtropical Agriculture, Chinese Academy of Sciences"	SAMN02947774	GCA_000740715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/715/GCA_000740715.1_ASM74071v1	25377715	NKYL29
Francisella sp. FSC1006	1547445	PRJNA261387	261387	Proteobacteria	Gammaproteobacteria	2.01599	32.4	chromosome:NZ_CP009574.1/CP009574.1	-	1	1972	1902	10/8/14	4/9/17	Complete Genome	Swedish Defence Research Agency	SAMN03073252	GCA_000764555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/555/GCA_000764555.1_ASM76455v1	25428973	FSC1006
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	4.27115	27.7	-	LFPH01	31	4096	3873	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779989	GCA_001573705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/705/GCA_001573705.1_ASM157370v1	26939550	AM1195
Enterococcus faecalis EnGen0097	1157358	PRJNA88217	88217	Terrabacteria group	Firmicutes	3.40671	37.1	-	AIQR01	18	3590	3404	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808921	GCA_000391345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/345/GCA_000391345.1_Ente_faec_B2535_V1	-	B2535
Streptococcus mutans SF1	857121	PRJNA49821	49821	Terrabacteria group	Firmicutes	2.08142	36.8	-	AHSP01	185	2074	1981	2/11/13	3/24/17	Contig	Cornell University	SAMN02429030	GCA_000340015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/015/GCA_000340015.1_ASM34001v1	23228887	SF1
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14949	52.4	-	CQOU01	80	2500	2189	3/23/15	4/11/17	Contig	SC	SAMEA1690348	GCA_001126045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/045/GCA_001126045.1_8289_2_37	-	GCGS037
Enterococcus faecium EnGen0030	1138922	PRJNA82495	82495	Terrabacteria group	Firmicutes	2.75035	38.2	-	AHXX01	7	2764	2598	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779837	GCA_000322245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/245/GCA_000322245.1_Ente_faec_E2883_V1	-	E2883
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.85108	66.1	-	JVCK01	315	4484	4288	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197752	GCA_001073355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/355/GCA_001073355.1_ASM107335v1	26230489	553_SMAL
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.13145	41.2	-	CVZU01	79	2063	1891	6/23/15	3/26/17	Contig	SC	SAMEA1032910	GCA_001177545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/545/GCA_001177545.1_6903_2_4	-	EQUI0053
Brucella melitensis	29459	PRJNA380526	380526	Proteobacteria	Alphaproteobacteria	3.28858	57.2	-	NBBM01	39	3363	3134	6/21/17	6/24/17	Contig	Institute for Medical Research	SAMN06644734	GCA_002204265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/265/GCA_002204265.1_ASM220426v1	-	BMM26/15
Flavobacterium psychrophilum	96345	PRJNA254203	254203	FCB group	Bacteroidetes/Chlorobi group	2.68459	32.4	chromosome:NZ_CP008881.1/CP008881.1	-	1	2413	2335	7/22/14	4/3/17	Complete Genome	University of Copenhagen	SAMN02900760	GCA_000831185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/185/GCA_000831185.1_ASM83118v1	25480749	V4-24
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.37747	53.6	-	LSYF01	42	2301	2085	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497030	GCA_002203225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/225/GCA_002203225.1_S131	-	2163
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.81924	47	-	CTKV01	59	4567	4339	3/26/15	3/26/17	Scaffold	SC	SAMEA980173	GCA_001219385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/385/GCA_001219385.1_5103_7_3	-	YE77/03
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.12996	59.9	-	FCGG01	29	4852	4708	1/21/16	3/27/17	Scaffold	SC	SAMEA2274096	GCA_001536605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/605/GCA_001536605.1_12045_8_19	-	2880STDY5683026
Lactobacillus plantarum	1590	PRJNA283610	283610	Terrabacteria group	Firmicutes	3.64607	43.9	-	LEBS01	234	3629	3381	12/3/16	3/28/17	Contig	"Faculty of Agro-industry, Prince of Songkla University, wageningen university"	SAMN03654486	GCA_001888275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/275/GCA_001888275.1_ASM188827v1	-	T10
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.70859	31.4	-	LBEK01	36	1764	1664	10/27/15	3/18/17	Contig	FDA	SAMN03344554	GCA_001416775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/775/GCA_001416775.1_ASM141677v1	-	CVM N45963
Burkholderia sp. K4410.MGS-135	1637500	PRJNA277012	277012	Proteobacteria	Betaproteobacteria	2.65442	55.4	-	LARC01	142	-	-	4/24/15	6/10/15	Contig	The Mayo Clinic	SAMN03449996	GCA_000980335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/335/GCA_000980335.1_ASM98033v1	26021920	-
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.60853	32.6	-	CUFX01	92	2617	2478	3/31/15	3/26/17	Scaffold	SC	SAMEA1035083	GCA_001233505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/505/GCA_001233505.1_7068_7_31	-	102938
Enterobacter cloacae	550	PRJNA259809	259809	Proteobacteria	Gammaproteobacteria	5.19958	54.9	-	JRFQ01	74	5151	4917	11/3/14	3/25/17	Scaffold	The University of Queensland	SAMN03013105	GCA_000770745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/745/GCA_000770745.1_ASM77074v1	-	Ecl1
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.65371	56.5	-	MRXP01	31	4517	4325	3/31/17	4/6/17	Scaffold	FDA/CFSAN	SAMN06124499	GCA_002075695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/695/GCA_002075695.1_ASM207569v1	-	MOD1-H269
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.20828	64.2	-	FRYV01	22	5223	5074	12/14/16	3/21/17	Contig	SC	SAMEA2070828	GCA_900130415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/415/GCA_900130415.1_10625_5_77	-	162
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.19716	63	-	DFOB01	27	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452310	GCA_002376625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/625/GCA_002376625.1_ASM237662v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.7189	67	-	LPDZ01	244	7056	6604	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449445	GCA_001529105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/105/GCA_001529105.1_ASM152910v1	-	MSMB1181WGS
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.79915	38.8	-	NGIQ01	96	3691	3507	5/16/17	5/24/17	Contig	JCVI	SAMN06892307	GCA_002145315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/145/315/GCA_002145315.1_ASM214531v1	-	ARLG1950
Enterobacter hormaechei	158836	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.89244	55.1	-	LEDF01	103	4847	4581	6/9/15	3/26/17	Contig	JCVI	SAMN03732726	GCA_001022855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/855/GCA_001022855.1_ASM102285v1	-	GN02768
Klebsiella aerogenes	548	PRJEB5989	276424	Proteobacteria	Gammaproteobacteria	9.57826	57.6	-	CCCG01	2173	-	-	2/24/15	2/24/15	Contig	CGS-GL	SAMEA2469799	GCA_000936205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/205/GCA_000936205.1_Km57A_B8C2_MIRA_assembly	-	-
Pseudomonas sp. Chol1	440512	PRJNA174132	174132	Proteobacteria	Gammaproteobacteria	4.86903	64	-	AMSL01	199	4618	4302	10/17/12	5/19/17	Contig	University of Muenster	SAMN02470134	GCA_000306015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/015/GCA_000306015.1_ASM30601v1	23405354	Chol1
Streptomyces sp. FXJ7.023	579932	PRJNA189794	189794	Terrabacteria group	Actinobacteria	8.21565	72.5	-	APIV01	84	7217	6577	5/31/13	3/9/17	Contig	"state Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences"	SAMN02470037	GCA_000404005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/005/GCA_000404005.1_Streptomyces_sp._FXJ7.023	-	FXJ7.023
Bacillus sp. MUM 116	1678002	PRJNA343851	343851	Terrabacteria group	Firmicutes	5.72039	38.4	-	MLYR01	208	5678	5353	11/4/16	4/13/17	Contig	Monash University Malaysia	SAMN05915830	GCA_001866655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/655/GCA_001866655.1_ASM186665v1	-	MUM 116
Acinetobacter sp. AG1	348388	PRJNA282007	282007	Proteobacteria	Gammaproteobacteria	3.67016	38.4	-	LBMZ01	124	3559	3382	5/8/15	4/6/17	Contig	New Mexico State University	SAMN03565669	GCA_001005525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/525/GCA_001005525.1_ASM100552v1	-	AG1
Clostridium sp. CAG:58	1262824	PRJEB943	206818	Terrabacteria group	Firmicutes	2.85568	52.6	-	CBFK01	148	2695	2660	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138676	GCA_000435795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/795/GCA_000435795.1_MGS58	-	-
Enterobacter sp. NFIX06	1566255	PRJEB17574	351999	Proteobacteria	Gammaproteobacteria	5.6009	54	-	FPAV01	34	5386	5153	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159428	GCA_900116465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/465/GCA_900116465.1_IMG-taxon_2600255310_annotated_assembly	-	NFIX06
Staphylococcus sp. HMSC068D03	1715044	PRJNA296171	296171	Terrabacteria group	Firmicutes	2.39084	32.6	-	LTPE01	95	2369	2232	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498577	GCA_001837445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/445/GCA_001837445.1_ASM183744v1	-	HMSC068D03
Streptococcus sp. HibF3	1859475	PRJNA340984	340984	Terrabacteria group	Firmicutes	2.04972	33.1	-	MKIQ01	31	2072	1973	10/13/16	4/13/17	Contig	"School of Industrial Technology, Universiti Sains Malaysia"	SAMN05831613	GCA_001832885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/885/GCA_001832885.1_ASM183288v1	-	HibF3
Prevotella sp. UBA2745	1947106	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.06062	55.4	-	DEJP01	104	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06454039	GCA_002353435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/435/GCA_002353435.1_ASM235343v1	28894102	-
Mycobacterium sp. 1274756.6	1834076	PRJNA305922	305922	Terrabacteria group	Actinobacteria	3.7603	70.5	-	LZLJ01	97	3535	3386	6/17/16	4/12/17	Contig	JCVI	SAMN04634181	GCA_001668625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/668/625/GCA_001668625.1_ASM166862v1	-	1274756.6
Paenibacillus sp. JCM 9795	1298601	PRJDB877	243761	Terrabacteria group	Firmicutes	5.50626	52	-	BBEA01	204	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016837	GCA_001312545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/545/GCA_001312545.1_ASM131254v1	-	JCM 9795
Prochlorococcus sp. scB243_498L10	1471495	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.34856	31.1	-	JFMT01	381	-	-	4/22/14	4/28/14	Scaffold	Massachusetts Institute of Technology	SAMN02671366	GCA_000635035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/035/GCA_000635035.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Prochlorococcus sp. scB245a_519C7	1471511	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.36617	31.4	-	JFNJ01	317	-	-	4/22/14	4/28/14	Scaffold	Massachusetts Institute of Technology	SAMN02671382	GCA_000635155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/155/GCA_000635155.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Paenibacillus sp. JCM 9796	1298602	PRJDB878	243762	Terrabacteria group	Firmicutes	5.50537	52	-	BBEB01	210	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016838	GCA_001312565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/565/GCA_001312565.1_ASM131256v1	-	JCM 9796
Mycobacterium sp. E2497	1834135	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.65662	68.3	-	LZKD01	305	5459	5068	6/17/16	4/13/17	Contig	JCVI	SAMN04634251	GCA_001668695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/668/695/GCA_001668695.1_ASM166869v1	-	E2497
Prevotella sp. UBA2743	1947105	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.15373	46.9	-	DEJR01	47	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06454045	GCA_002353445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/445/GCA_002353445.1_ASM235344v1	28894102	-
Streptococcus sp. NZ1587	1856638	PRJNA324185	324185	Terrabacteria group	Firmicutes	2.07504	37.3	-	LZDD01	8	2091	1994	11/21/16	4/14/17	Contig	University of Cambridge	SAMN05199910	GCA_001885095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/095/GCA_001885095.1_ASM188509v1	-	NZ1587
Staphylococcus sp. HMSC069D04	1715067	PRJNA296195	296195	Terrabacteria group	Firmicutes	2.43031	32.7	-	LTPC01	81	2396	2297	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498594	GCA_001837485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/485/GCA_001837485.1_ASM183748v1	-	HMSC069D04
Enterobacter sp. NFIX03	1566257	PRJEB17900	353828	Proteobacteria	Gammaproteobacteria	5.5972	54	-	FPJU01	34	5365	5142	11/17/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159436	GCA_900119515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/515/GCA_900119515.1_IMG-taxon_2600255257_annotated_assembly	-	NFIX03
Clostridium sp. CAG:221	1262780	PRJEB766	206641	Terrabacteria group	Firmicutes	3.09348	29	-	CBDC01	84	3005	2985	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138678	GCA_000435835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/435/835/GCA_000435835.1_MGS221	-	-
Acinetobacter sp. VT 511	1675902	PRJNA287555	287555	Proteobacteria	Gammaproteobacteria	3.41632	42.7	-	LFRE01	121	3409	3051	7/14/15	4/6/17	Contig	Institute of Human Microbiology	SAMN03783304	GCA_001077515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/515/GCA_001077515.1_ASM107751v1	-	VT 511
Bacillus sp. MUM 13	1678001	PRJNA343850	343850	Terrabacteria group	Firmicutes	4.64923	40.8	-	MLYQ01	186	4566	4368	11/4/16	4/13/17	Contig	Monash University Malaysia	SAMN05915829	GCA_001866725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/725/GCA_001866725.1_ASM186672v1	-	MUM 13
Streptomyces sp. AW19M42	1379686	PRJEB4258	219039	Terrabacteria group	Actinobacteria	8.00879	70.6	-	CBRG01	670	7300	6478	9/11/13	3/9/17	Contig	salmonicida	SAMEA2272178	GCA_000470535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/535/GCA_000470535.1_STREPTOMYCES1	-	-
Pseudomonas sp. PAMC 26793	1240676	PRJNA176955	176955	Proteobacteria	Gammaproteobacteria	6.77179	60.6	-	AMXG01	58	6365	6124	11/15/12	5/19/17	Contig	Korea Polar Research Institute	SAMN02470167	GCA_000313235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/235/GCA_000313235.1_PAMC26508ASM01	23405349	PAMC 26793
Klebsiella aerogenes	548	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.85605	54.9	-	JZSF01	826	4699	2205	3/10/15	3/10/15	Contig	FDA/CFSAN	SAMN03295490	GCA_000950145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/145/GCA_000950145.1_CFSAN029442_01.0	-	GCSL-DIFS-311
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.71111	55.4	-	LEDE01	40	4572	4393	6/9/15	3/26/17	Contig	JCVI	SAMN03732727	GCA_001022875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/875/GCA_001022875.1_ASM102287v1	-	GN02773
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.89233	38.8	-	NGIW01	33	3734	3607	5/16/17	5/24/17	Contig	JCVI	SAMN06892280	GCA_002145325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/145/325/GCA_002145325.1_ASM214532v1	-	ARLG1865
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.50872	67.1	-	LPEA01	163	6814	6369	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449446	GCA_001529125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/125/GCA_001529125.1_ASM152912v1	-	MSMB1183WGS
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.37519	62.9	-	DFPK01	18	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455537	GCA_002377205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/205/GCA_002377205.1_ASM237720v1	28894102	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18189	64.2	-	FRZC01	22	5185	5042	12/14/16	3/21/17	Contig	SC	SAMEA2071251	GCA_900130425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/425/GCA_900130425.1_10625_5_78	-	163
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.56798	56.7	-	MRXU01	22	4417	4231	3/31/17	4/3/17	Scaffold	FDA/CFSAN	SAMN06124506	GCA_002075735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/735/GCA_002075735.1_ASM207573v1	-	MOD1-35SS5
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.91608	55.2	-	JYMD01	100	4871	4604	3/13/15	3/25/17	Scaffold	University of Minnesota	SAMN03333154	GCA_000952195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/195/GCA_000952195.1_ASM95219v1	26438492	MNCRE84
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.47727	32.8	-	CUGV01	182	2487	2273	3/31/15	4/21/17	Scaffold	SC	SAMEA1035148	GCA_001234045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/045/GCA_001234045.1_7068_7_51	-	136731
Burkholderia sp. ST111	1682204	PRJNA289662	289662	Proteobacteria	Betaproteobacteria	8.8362	61.4	-	LGIO01	153	7893	5745	9/18/15	9/18/15	Contig	Hasselt University	SAMN03856706	GCA_001294705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/705/GCA_001294705.1_ASM129470v1	-	ST111
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.72261	31.4	-	LBEF01	24	1791	1694	10/27/15	3/18/17	Contig	FDA	SAMN03344559	GCA_001416825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/825/GCA_001416825.1_ASM141682v1	-	CVM N49249
Lactobacillus plantarum	1590	PRJNA283610	283610	Terrabacteria group	Firmicutes	3.26431	44.5	-	LEBP01	60	3177	3017	12/3/16	3/28/17	Contig	"Faculty of Agro-industry, Prince of Songkla University, wageningen university"	SAMN03654472	GCA_001888325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/325/GCA_001888325.1_ASM188832v1	-	P31
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.00751	60.2	-	FCKK01	15	4724	4574	1/21/16	3/27/17	Scaffold	SC	SAMEA2274031	GCA_001536625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/625/GCA_001536625.1_12082_3_56	-	2880STDY5682959
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.69228	47	-	CTKX01	35	4349	4167	3/26/15	3/26/17	Scaffold	SC	SAMEA980182	GCA_001219605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/605/GCA_001219605.1_5116_2_4	-	YE04/02
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.40333	53.6	-	LSYJ01	44	2328	2108	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497035	GCA_002203235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/235/GCA_002203235.1_S136	-	2399
Flavobacterium psychrophilum	96345	PRJNA254206	254206	FCB group	Bacteroidetes/Chlorobi group	2.69939	32.4	chromosome:NZ_CP008883.1/CP008883.1	-	1	2429	2348	7/22/14	4/3/17	Complete Genome	University of Copenhagen	SAMN02900764	GCA_000831205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/205/GCA_000831205.1_ASM83120v1	25480749	v4-33
Brucella melitensis	29459	PRJNA380526	380526	Proteobacteria	Alphaproteobacteria	3.28896	57.2	-	NCRJ01	44	3365	3140	6/21/17	6/24/17	Contig	Institute for Medical Research	SAMN06687274	GCA_002204295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/295/GCA_002204295.1_ASM220429v1	-	BMM 15/15
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12653	41.2	-	CWCZ01	78	2056	1875	6/23/15	3/26/17	Contig	SC	SAMEA1032912	GCA_001177565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/565/GCA_001177565.1_6903_6_20	-	EQUI0165
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.71645	66.3	-	JUQT01	633	4613	4020	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198055	GCA_001074595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/595/GCA_001074595.1_ASM107459v1	26230489	847.rep1_SMAL
Enterococcus faecium EnGen0056	1138924	PRJNA82499	82499	Terrabacteria group	Firmicutes	2.71572	38.3	-	AHXZ01	6	2710	2523	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779839	GCA_000322265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/265/GCA_000322265.1_Ente_faec_E3083_V1	-	E3083
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.14646	52.4	-	CQOR01	68	2525	2191	3/23/15	4/11/17	Contig	SC	SAMEA1677410	GCA_001126285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/285/GCA_001126285.1_8727_5_73	-	GCGS223
Streptococcus mutans ST1	857118	PRJNA49827	49827	Terrabacteria group	Firmicutes	1.98046	36.7	-	AHSS01	131	1983	1882	2/11/13	3/23/17	Contig	Cornell University	SAMN02429067	GCA_000340035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/035/GCA_000340035.1_ASM34003v1	23228887	ST1
Enterococcus faecalis EnGen0112	1157359	PRJNA88219	88219	Terrabacteria group	Firmicutes	3.37676	37.1	-	AIQS01	27	3552	3362	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808922	GCA_000391365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/365/GCA_000391365.1_Ente_faec_B2557_V1	-	B2557
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.90004	28	-	LFPI01	34	3783	3615	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779954	GCA_001573725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/725/GCA_001573725.1_ASM157372v1	26939550	AM1295
Flavobacterium psychrophilum	96345	PRJNA254201	254201	FCB group	Bacteroidetes/Chlorobi group	2.69802	32.4	chromosome:NZ_CP008878.1/CP008878.1	-	1	2426	2346	7/22/14	4/3/17	Complete Genome	University of Copenhagen	SAMN02900749	GCA_000831225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/225/GCA_000831225.1_ASM83122v1	25480749	V3-5
Bacillus subtilis subsp. subtilis	135461	PRJNA266797	266797	Terrabacteria group	Firmicutes	4.30764	43.3	-	JSXS01	168	4680	4332	1/27/15	8/27/17	Scaffold	TIFN	SAMN03167797	GCA_000828495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/495/GCA_000828495.1_ASM82849v1	26988043	B4067
Vibrio parahaemolyticus S143	1394677	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.06002	45.3	-	AWIJ01	461	4800	4586	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338991	GCA_000489595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/595/GCA_000489595.1_S143	-	S143
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.0552	38	-	MLOA01	678	2215	1822	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297092	GCA_001868925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/925/GCA_001868925.1_ASM186892v1	27118061	AWRIB540
Xanthomonas oryzae pv. oryzae	64187	PRJNA269488	269488	Proteobacteria	Gammaproteobacteria	4.39419	63.8	-	JXHG01	474	4417	3529	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252587	GCA_001929245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/245/GCA_001929245.1_ASM192924v1	-	IXO1104
Brucella abortus CNGB 308	1198688	PRJNA176528	176528	Proteobacteria	Alphaproteobacteria	3.28429	57.2	-	AQLY01	4	3374	3150	4/16/13	3/23/17	Contig	Broad Institute	SAMN01047739	GCA_000366545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/545/GCA_000366545.1_Bruc_abor_CNGB_308_V1	-	CNGB 308
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.77302	32.3	-	MRKY01	150	1807	1543	4/19/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773854	GCA_002101105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/105/GCA_002101105.1_ASM210110v1	28348839	FDC300
Clostridioides difficile DA00132	1151326	PRJNA85827	85827	Terrabacteria group	Firmicutes	4.0709	28.2	-	AVJA01	78	3803	3623	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766642	GCA_000450065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/065/GCA_000450065.2_ASM45006v2	-	DA00132
Vibrio cholerae O1 str. NHCC-010F	1095658	PRJNA76251	76251	Proteobacteria	Gammaproteobacteria	4.02881	47.5	-	APGD01	92	3847	3678	3/22/13	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00989312	GCA_000348445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/445/GCA_000348445.2_ASM34844v2	-	NHCC-010F
Bacillus thuringiensis T01-328	1324966	PRJNA198475	198475	Terrabacteria group	Firmicutes	7.08969	34.5	-	ARXZ02	143	7711	7195	5/1/13	4/2/17	Scaffold	"Univ. Estadual Paulista -Julio de Mesquita Filho- Campus de Jaboticabal, Sao Paulo, CEP 14884-900, Brasil"	SAMN02471346	GCA_000387405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/405/GCA_000387405.2_bt_cbt_v2.0	24115545	T01-328
Chlamydia trachomatis	813	PRJEB2035	203744	PVC group	Chlamydiae	1.84785	35.2	-	CVNU01	86	2216	2132	4/22/15	11/9/15	Contig	SC	SAMEA1398231	GCA_001398115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/115/GCA_001398115.1_7501_6_59	-	R36176extract
Burkholderia pseudomallei MSHR4299	1434201	PRJNA230733	230733	Proteobacteria	Betaproteobacteria	7.31935	68	-	JPVC01	2	7568	6969	11/11/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02948392	GCA_000774465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/465/GCA_000774465.1_BCW_18	25676747	MSHR4299
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.05425	66.9	-	MUUW01	172	7754	7262	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001955	GCA_001992915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/915/GCA_001992915.1_ASM199291v1	-	VC7723
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.81627	50.8	-	NVQG01	89	5058	4712	9/20/17	9/22/17	Contig	JCVI	SAMN07450650	GCA_002317065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/065/GCA_002317065.1_ASM231706v1	-	ECFood+06
Legionella pneumophila	446	PRJNA281284	281284	Proteobacteria	Gammaproteobacteria	3.47549	38.2	-	LBAQ01	44	3184	3053	3/8/16	3/27/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03486933	GCA_001582735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/735/GCA_001582735.1_ASM158273v1	26888563	BJ7
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.26873	58.5	-	MTYY01	317	6097	5518	4/27/17	5/3/17	Contig	Massey University	SAMN06197082	GCA_002111945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/945/GCA_002111945.1_ASM211194v1	28369338	NZ37
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.087	41.3	-	CEJP01	129	2103	1969	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233969	GCA_000937335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/335/GCA_000937335.1_Velvet_assembly	-	LSV
Streptococcus agalactiae GB00002	1154891	PRJNA86455	86455	Terrabacteria group	Firmicutes	1.96875	35.1	-	ALSL01	15	2008	1904	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991164	GCA_000289475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/475/GCA_000289475.1_ASM28947v1	-	GB00002
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	3.96333	39	-	JSCV01	98	3865	3692	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068266	GCA_000804895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/895/GCA_000804895.1_ASM80489v1	25487793	2011ZJAB1
Pseudomonas aeruginosa C51	1402577	PRJNA219939	219939	Proteobacteria	Gammaproteobacteria	6.91328	66.1	-	AXOQ01	18	6566	6377	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360749	GCA_000480415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/415/GCA_000480415.1_Pseu_aeru_3571_V1	-	C51
Shigella flexneri 2001044	1434160	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.4263	50.5	-	AZPM01	340	4932	4220	1/29/14	2/22/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437395	GCA_000566145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/145/GCA_000566145.1_ASM56614v1	-	2001044
Bacillus anthracis	1392	PRJNA264742	264742	Terrabacteria group	Firmicutes	5.4493	35.1	-	JSZP01	44	6076	5708	11/14/14	3/25/17	Scaffold	Georgia Institute of Technology	SAMN03165114	GCA_000782955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/955/GCA_000782955.1_ASM78295v1	-	2000031031
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.53317	35	-	JQOP01	213	4069	3701	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947410	GCA_001567705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/705/GCA_001567705.1_ASM156770v1	26833181	56678
Streptococcus pyogenes ABC020047619	1439161	PRJNA233095	233095	Terrabacteria group	Firmicutes	1.85233	38.5	-	JJHR01	5	1913	1796	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567444	GCA_000631005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/005/GCA_000631005.1_Stre_pyog_ABC020047619_V1	-	ABC020047619
Neisseria meningitidis DE9622	1123521	PRJNA78227	78227	Proteobacteria	Betaproteobacteria	2.13762	51.7	-	AJJX01	144	2533	2085	6/5/12	4/11/17	Contig	University of Würzburg	SAMN02472027	GCA_000265155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/155/GCA_000265155.1_ASM26515v1	22461678	DE9622
Helicobacter pylori GAM231Ai	1159033	PRJNA89237	89237	Proteobacteria	delta/epsilon subdivisions	1.62026	39.2	-	APDI01	58	1577	1430	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436784	GCA_000345185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/185/GCA_000345185.2_ASM34518v2	-	GAM231Ai
Streptococcus pneumoniae GA44511	760827	PRJNA48843	48843	Terrabacteria group	Firmicutes	2.14218	39.7	-	AGOR01	24	2382	2048	10/25/11	3/8/17	Contig	Institute for Genome Sciences	SAMN00792797	GCA_000232405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/405/GCA_000232405.2_ASM23240v2	-	GA44511
Candidatus Kinetoplastibacterium galatii TCC219	1208921	PRJNA169069	169069	Proteobacteria	Betaproteobacteria	0.82214	32.4	chromosome:NC_020284.1/CP003806.1	-	1	785	707	2/19/13	4/17/17	Complete Genome	VCU	SAMN02641645	GCA_000340905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/905/GCA_000340905.1_ASM34090v1	23345457	TCC219
Mycobacterium tuberculosis PanR0405	1346771	PRJNA208599	208599	Terrabacteria group	Actinobacteria	4.40357	65.6	chromosome:NZ_CM002063.1/CM002063.1	ATEC01	1	4288	4077	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471044	GCA_000443545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/545/GCA_000443545.1_fedora0405c_IS	23884993	PanR0405
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.8601	38	-	FFIL01	14	1874	1735	2/9/16	3/27/17	Scaffold	SC	SAMEA2674750	GCA_900038065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/065/GCA_900038065.1_14412_4_33	-	2842STDY5882061
Mycobacterium avium	1764	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.21943	69.1	-	NSEW01	120	4940	4690	9/12/17	9/14/17	Contig	University of Michigan Medical School	SAMN07528796	GCA_002292445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/445/GCA_002292445.1_ASM229244v1	-	FLAC0351
Bacillus cereus str. Schrouff	718221	PRJNA70289	70289	Terrabacteria group	Firmicutes	6.26708	34.8	-	AHCI01	18	6587	6121	5/16/13	3/24/17	Scaffold	Broad Institute	SAMN02596794	GCA_000398945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/945/GCA_000398945.1_Baci_cere_Schrouff_V2	-	Schrouff
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.44003	32	-	JUQQ01	108	2381	2297	7/10/15	3/26/17	Contig	University of Washington	SAMN03198058	GCA_001075165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/165/GCA_001075165.1_ASM107516v1	26230489	849_SEPI
Rickettsia parkeri str. Portsmouth	1105108	PRJNA75031	75031	Proteobacteria	Alphaproteobacteria	1.30039	32.4	chromosome:NC_017044.1/CP003341.1	-	1	1549	1273	3/1/12	4/7/17	Complete Genome	Los Alamos National Laboratory	SAMN02603556	GCA_000284195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/195/GCA_000284195.1_ASM28419v1	-	Portsmouth
Yersinia pestis PY-53	992155	PRJNA64337	64337	Proteobacteria	Gammaproteobacteria	4.65052	47.6	-	AKSO01	650	4554	4204	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141476	GCA_000268785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/785/GCA_000268785.1_ASM26878v1	-	PY-53
Campylobacter jejuni subsp. jejuni HB93-13	360112	PRJNA16267	16267	Proteobacteria	delta/epsilon subdivisions	1.69479	30.6	-	AANQ01	35	1747	1627	1/27/06	3/15/17	Scaffold	TIGR	SAMN02435861	GCA_000168175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/175/GCA_000168175.1_ASM16817v1	-	HB93-13
Rickettsia rickettsii str. Arizona	1105105	PRJNA75025	75025	Proteobacteria	Alphaproteobacteria	1.2672	32.4	chromosome:NC_016909.1/CP003307.1	-	1	1539	1260	2/17/12	3/30/17	Complete Genome	Los Alamos National Laboratory	SAMN02603553	GCA_000283795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/795/GCA_000283795.1_ASM28379v1	-	Arizona
Rickettsia japonica YH	652620	PRJDA38487	38487	Proteobacteria	Alphaproteobacteria	1.28309	32.4	chromosome:NC_016050.1/AP011533.1	-	1	1525	1206	10/1/11	4/7/17	Complete Genome	Yamaguchi University	SAMD00060967	GCA_000283595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/595/GCA_000283595.1_ASM28359v1	24039725	YH
Rickettsia rickettsii str. Iowa	452659	PRJNA19943	19943	Proteobacteria	Alphaproteobacteria	1.2682	32.4	chromosome:NC_010263.3/CP000766.3	-	1	1540	1260	1/17/08	4/3/17	Complete Genome	Rocky Mountain Laboratories	SAMN02603768	GCA_000017445.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/445/GCA_000017445.3_ASM1744v3	18025092	Iowa
Rickettsia conorii str. Malish 7	272944	PRJNA42	42	Proteobacteria	Alphaproteobacteria	1.26876	32.4	chromosome:NC_003103.1/AE006914.1	-	1	1539	1289	10/3/01	4/6/17	Complete Genome	CNRS	SAMN02603141	GCA_000007025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/025/GCA_000007025.1_ASM702v1	"1,103,065,511,557,890"	Malish 7
Campylobacter jejuni subsp. jejuni NW	1093788	PRJNA73823	73823	Proteobacteria	delta/epsilon subdivisions	1.6527	30.3	-	AGTE01	59	1733	1612	11/4/11	3/15/17	Scaffold	"Comparative Enteric Diseases Laboratory, Michigan State University"	SAMN02470549	GCA_000234525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/525/GCA_000234525.1_ASM23452v1	23012285	NW
Yersinia pestis PY-54	992156	PRJNA64339	64339	Proteobacteria	Gammaproteobacteria	4.60423	47.7	-	AKSP01	1330	4462	4137	6/15/12	3/27/17	Contig	Institute for Genome Sciences	SAMN02141477	GCA_000268805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/805/GCA_000268805.2_ASM26880v2	-	PY-54
Francisella tularensis subsp. novicida F6168	1452728	PRJNA236045	236045	Proteobacteria	Gammaproteobacteria	1.92724	32.3996	chromosome:NZ_CP009353.1/CP009353.1; plasmid unnamed:NZ_CP009352.1/CP009352.1	-	2	1863	1738	2/6/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03010444	GCA_000833165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/165/GCA_000833165.1_ASM83316v1	25931589	F6168
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.54118	32	-	JUOW01	161	2471	2387	7/10/15	3/26/17	Contig	University of Washington	SAMN03198104	GCA_001075235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/235/GCA_001075235.1_ASM107523v1	26230489	897_SEPI
Bacillus cereus HuA3-9	1053205	PRJNA70375	70375	Terrabacteria group	Firmicutes	6.24132	35.3	-	AHDZ01	27	6426	5989	5/16/13	3/24/17	Scaffold	Broad Institute	SAMN02596837	GCA_000398965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/965/GCA_000398965.1_Baci_cere_HuA3-9_V1	-	HuA3-9
Mycobacterium avium	1764	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.21575	69.2	-	NSFB01	65	4945	4724	9/12/17	9/14/17	Contig	University of Michigan Medical School	SAMN07528791	GCA_002292475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/475/GCA_002292475.1_ASM229247v1	-	FLAC0216
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.80535	38	-	FFIM01	22	1823	1693	2/9/16	3/27/17	Scaffold	SC	SAMEA2674753	GCA_900039575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/575/GCA_900039575.1_14412_4_36	-	2842STDY5882064
Mycobacterium tuberculosis PanR0404	1346772	PRJNA208598	208598	Terrabacteria group	Actinobacteria	4.40425	65.2992	chromosome:NZ_CM002064.1/CM002064.1	ATED01	1	4324	4075	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471093	GCA_000443575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/575/GCA_000443575.1_fedora0404_IS	23884993	PanR0404
Francisella philomiragia	28110	PRJNA260381	260381	Proteobacteria	Gammaproteobacteria	2.15205	32.3925	chromosome:NZ_CP009440.1/CP009440.1; plasmid unnamed:NZ_CP009441.1/CP009441.1	-	2	2082	2008	2/6/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03024266	GCA_000833255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/255/GCA_000833255.1_ASM83325v1	25931589	GA01-2794
Streptococcus pneumoniae NP170	760885	PRJNA48963	48963	Terrabacteria group	Firmicutes	2.1902	39.5	-	AGOS01	15	2379	2075	10/25/11	3/9/17	Contig	Institute for Genome Sciences	SAMN00792704	GCA_000232425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/425/GCA_000232425.2_ASM23242v2	-	NP170
Helicobacter pylori GAM239Bi	1159034	PRJNA89239	89239	Proteobacteria	delta/epsilon subdivisions	1.62925	39.2	-	APDJ01	69	1617	1464	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436846	GCA_000345205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/205/GCA_000345205.2_ASM34520v2	-	GAM239Bi
Neisseria meningitidis DE9938	1123522	PRJNA78229	78229	Proteobacteria	Betaproteobacteria	2.13553	51.7	-	AJJY01	151	2509	2073	6/5/12	4/11/17	Contig	University of Würzburg	SAMN02472025	GCA_000265175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/175/GCA_000265175.1_ASM26517v1	22461678	DE9938
Streptococcus pyogenes ABC020047076	1439152	PRJNA233094	233094	Terrabacteria group	Firmicutes	1.90105	38.6	-	JJHS01	6	1984	1869	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567443	GCA_000631025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/025/GCA_000631025.1_Stre_pyog_ABC020047076_V1	-	ABC020047076
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.79882	35.1	-	JQOQ01	348	4457	3966	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949561	GCA_001567725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/725/GCA_001567725.1_ASM156772v1	26833181	200040
Bacillus anthracis	1392	PRJNA264742	264742	Terrabacteria group	Firmicutes	5.44962	35.1	-	JSZR01	34	6080	5715	11/14/14	3/25/17	Scaffold	Georgia Institute of Technology	SAMN03165116	GCA_000782975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/975/GCA_000782975.1_ASM78297v1	-	2000031039
Shigella flexneri 2002021	1434161	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.41156	50.5	-	AZPN01	310	4859	4093	1/29/14	3/5/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437396	GCA_000566165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/165/GCA_000566165.1_ASM56616v1	-	2002021
Pseudomonas aeruginosa C48	1402576	PRJNA219938	219938	Proteobacteria	Gammaproteobacteria	6.41083	66.3	-	AXOR01	6	6028	5876	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360748	GCA_000480435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/435/GCA_000480435.1_Pseu_aeru_3570_V1	-	C48
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	3.85979	39	-	JSCU01	68	3745	3588	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068264	GCA_000804905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/905/GCA_000804905.1_ASM80490v1	25487793	2005LNAB4
Streptococcus agalactiae GB00097	1154901	PRJNA86475	86475	Terrabacteria group	Firmicutes	2.01199	35.2	-	ALSV01	31	2062	1926	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991150	GCA_000289495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/495/GCA_000289495.1_ASM28949v1	-	GB00097
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.15556	41	-	CEEF01	103	2133	1969	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233923	GCA_000937395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/395/GCA_000937395.1_Velvet_assembly	-	type strain: LS4
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.27545	58.5	-	MTYZ01	322	6127	5512	4/27/17	5/3/17	Contig	Massey University	SAMN06197083	GCA_002111955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/955/GCA_002111955.1_ASM211195v1	28369338	NZ38
Legionella pneumophila	446	PRJNA280920	280920	Proteobacteria	Gammaproteobacteria	3.56206	38.1	-	LAVR01	60	3271	3046	3/9/16	3/27/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03480669	GCA_001583655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/655/GCA_001583655.1_ASM158365v1	26888563	SH003
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.02081	50.4	-	NQDD01	138	5256	4876	9/20/17	9/22/17	Contig	JCVI	SAMN07450649	GCA_002317875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/875/GCA_002317875.1_ASM231787v1	-	ECFood+08
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.11527	66.9	-	MUUX01	244	7843	7294	2/10/17	4/2/17	Contig	University of British Columbia	SAMN05001956	GCA_001992925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/925/GCA_001992925.1_ASM199292v1	-	VC7880
Burkholderia pseudomallei MSHR3964	1434927	PRJNA230985	230985	Proteobacteria	Betaproteobacteria	7.30021	68.1	-	JPVD01	2	7562	6995	11/11/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02948393	GCA_000774475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/475/GCA_000774475.1_BCW_3	25676747	MSHR3964
Chlamydia trachomatis	813	PRJEB2035	203744	PVC group	Chlamydiae	1.52862	40.4	-	CVNY01	419	1495	1430	4/22/15	6/13/15	Contig	SC	SAMEA1398271	GCA_001398195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/195/GCA_001398195.1_7794_5_16	-	H21IMS
Bacillus thuringiensis serovar aizawai str. Leapi01	1232203	PRJNA175222	175222	Terrabacteria group	Firmicutes	6.15672	35	-	AMXS02	225	6532	5848	9/19/13	4/10/17	Scaffold	Universidad Publica de Navarra	SAMN02471368	GCA_000468975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/975/GCA_000468975.2_Leapi01_second_assembly_version	24784323	Leapi01
Vibrio cholerae O1 str. Nep-21106	1095642	PRJNA76219	76219	Proteobacteria	Gammaproteobacteria	4.03123	47.5	-	APGE01	80	3838	3681	3/22/13	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00989310	GCA_000348465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/465/GCA_000348465.2_ASM34846v2	-	Nep-21106
Clostridioides difficile DA00134	1151327	PRJNA85829	85829	Terrabacteria group	Firmicutes	4.11508	28.7	-	AVJB01	98	3906	3672	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766644	GCA_000450085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/085/GCA_000450085.2_ASM45008v2	-	DA00134
Francisella tularensis subsp. holarctica	119857	PRJNA285142	285142	Proteobacteria	Gammaproteobacteria	1.82511	32.2	-	MRBA01	100	1954	1567	4/20/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773882	GCA_002102455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/455/GCA_002102455.1_ASM210245v1	27356883	FDC408
Brucella abortus CNGB 436	1198687	PRJNA176527	176527	Proteobacteria	Alphaproteobacteria	3.28544	57.2	-	AQLZ01	3	3379	3154	4/16/13	3/23/17	Contig	Broad Institute	SAMN01047738	GCA_000366565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/565/GCA_000366565.1_Bruc_abor_CNGB_436_V1	-	CNGB 436
Xanthomonas oryzae pv. oryzae	64187	PRJNA269489	269489	Proteobacteria	Gammaproteobacteria	4.34302	63.9	-	JXHH01	490	4333	3458	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252589	GCA_001929255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/255/GCA_001929255.1_ASM192925v1	-	IXO1221
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.00907	38.1	-	MLOC01	288	2056	1822	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297094	GCA_001868965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/965/GCA_001868965.1_ASM186896v1	27118061	AWRIB565
Vibrio parahaemolyticus S142	1394676	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.17467	45	-	AWIK01	594	4967	4719	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338990	GCA_000489615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/615/GCA_000489615.1_S142	-	S142
Bacillus subtilis	1423	PRJNA266797	266797	Terrabacteria group	Firmicutes	4.01941	43.4	-	JXHO01	72	4280	4028	2/2/15	3/25/17	Scaffold	TIFN	SAMN03174422	GCA_000830595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/595/GCA_000830595.1_ASM83059v1	26988043	B4072
Rickettsia rhipicephali str. 3-7-female6-CWPP	1105113	PRJNA75041	75041	Proteobacteria	Alphaproteobacteria	1.30547	32.3884	chromosome:NC_017042.1/CP003342.1; plasmid pMCC_1:NC_017055.1/CP003343.1	-	2	1556	1142	3/1/12	4/7/17	Complete Genome	Los Alamos National Laboratory	SAMN02603560	GCA_000284075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/075/GCA_000284075.1_ASM28407v1	-	3-7-female6-CWPP
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	4.26966	27.7	-	LFPJ01	31	4077	3874	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779990	GCA_001573755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/755/GCA_001573755.1_ASM157375v1	26939550	AM370
Enterococcus faecalis EnGen0098	1157360	PRJNA88221	88221	Terrabacteria group	Firmicutes	3.35529	37.2	-	AIQT01	9	3512	3336	5/3/13	4/10/17	Scaffold	Broad Institute	SAMN00808923	GCA_000391385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/385/GCA_000391385.1_Ente_faec_B2593_V1	-	B2593
Streptococcus mutans ST6	857117	PRJNA49829	49829	Terrabacteria group	Firmicutes	1.92585	36.9	-	AHST01	121	1917	1812	2/11/13	3/23/17	Contig	Cornell University	SAMN02428976	GCA_000340055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/055/GCA_000340055.1_ASM34005v1	23228887	ST6
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.14079	52.4	-	CQOM01	68	2515	2188	3/23/15	4/11/17	Contig	SC	SAMEA1677426	GCA_001126665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/665/GCA_001126665.1_8727_5_49	-	GCGS199
Enterococcus faecium EnGen0052	1138925	PRJNA82501	82501	Terrabacteria group	Firmicutes	2.73873	38.3	-	AHYA01	16	2802	2532	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779840	GCA_000322285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/285/GCA_000322285.1_Ente_faec_E3346_V1	-	E3346
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.11256	65.8	-	JUPB01	264	4765	4646	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198099	GCA_001075245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/245/GCA_001075245.1_ASM107524v1	26230489	892_SMAL
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.16022	41.1	-	CWFM01	72	2101	1930	6/23/15	3/26/17	Contig	SC	SAMEA1032914	GCA_001177585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/585/GCA_001177585.1_6817_1_63	-	EQUI0016
Brucella melitensis	29459	PRJNA380526	380526	Proteobacteria	Alphaproteobacteria	3.28878	57.2	-	NCRL01	35	3361	3135	6/21/17	6/24/17	Contig	Institute for Medical Research	SAMN06687272	GCA_002204335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/335/GCA_002204335.1_ASM220433v1	-	BMM 13/15
Staphylococcus argenteus	985002	PRJEA62885	62885	Terrabacteria group	Firmicutes	2.78764	32.3652	chromosome:NC_016941.1/FR821777.2; plasmid pST75:NC_016942.1/FR821778.1	-	2	2738	2568	11/10/11	9/18/17	Complete Genome	The Wellcome Trust Sanger Institute	SAMEA2272597	GCA_000236925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/925/GCA_000236925.1_ASM23692v1	21813488	MSHR1132
Corynebacterium diphtheriae bv. mitis	1806053	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.39486	53.6	-	LSYL01	59	2312	2117	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497036	GCA_002203275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/275/GCA_002203275.1_S138	-	2650
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.63604	47.2	-	CTIU01	61	4298	4115	3/26/15	3/26/17	Scaffold	SC	SAMEA980154	GCA_001219625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/625/GCA_001219625.1_4976_2_8	-	YE13/03
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.01066	60.2	-	FCLC01	18	4735	4573	1/21/16	3/27/17	Scaffold	SC	SAMEA2274049	GCA_001536645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/645/GCA_001536645.1_12082_3_73	-	2880STDY5682977
Lactobacillus plantarum	1590	PRJNA283610	283610	Terrabacteria group	Firmicutes	3.2743	44.5	-	LEBO01	63	3192	3039	12/3/16	3/28/17	Contig	"Faculty of Agro-industry, Prince of Songkla University, wageningen university"	SAMN03654474	GCA_001888335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/335/GCA_001888335.1_ASM188833v1	-	P42
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.74359	31.3	-	LBDY01	61	1806	1704	10/27/15	3/18/17	Contig	FDA	SAMN03344566	GCA_001416855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/855/GCA_001416855.1_ASM141685v1	-	CVM N44406F
Burkholderia sp. DNA89	1888165	PRJNA338131	338131	Proteobacteria	Betaproteobacteria	8.13737	66.5	-	MDEQ01	892	7497	6128	11/18/16	11/18/16	Contig	UFRGS	SAMN05521522	GCA_001883705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/705/GCA_001883705.1_ASM188370v1	-	DNA89
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.58763	32.7	-	CUFM01	82	2574	2448	3/31/15	3/26/17	Scaffold	SC	SAMEA1035093	GCA_001234485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/485/GCA_001234485.1_7068_7_2	-	CN1234
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.92296	55.1	-	JYMB01	68	4868	4618	3/13/15	3/25/17	Scaffold	University of Minnesota	SAMN03333152	GCA_000952215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/215/GCA_000952215.1_ASM95221v1	26438492	MNCRE30
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.69062	56.8	-	MRXW01	45	4607	4423	3/31/17	4/6/17	Scaffold	FDA/CFSAN	SAMN06124513	GCA_002075775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/775/GCA_002075775.1_ASM207577v1	-	MOD1-SP4
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.90668	64.1	-	FVBQ01	8	4910	4795	3/10/17	3/18/17	Contig	SC	SAMEA2070423	GCA_900130435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/435/GCA_900130435.1_10625_5_79	-	164
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.51256	64.2	-	DFRV01	23	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06456332	GCA_002378365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/365/GCA_002378365.1_ASM237836v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.6349	67.2	-	LPED01	121	7024	6621	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449451	GCA_001529135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/135/GCA_001529135.1_ASM152913v1	-	MSMB1212WGS
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.96377	38.7	-	NGIX01	21	3850	3727	5/16/17	5/24/17	Contig	JCVI	SAMN06892278	GCA_002145355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/145/355/GCA_002145355.1_ASM214535v1	-	ARLG1869
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.75228	55.5	-	LEDD01	50	4595	4408	6/9/15	3/26/17	Contig	JCVI	SAMN03732728	GCA_001022885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/885/GCA_001022885.1_ASM102288v1	-	GN02808
Pseudomonas sp. 313	1234594	PRJNA175607	175607	Proteobacteria	Gammaproteobacteria	5.20302	65.3	-	ANBZ01	110	4795	4627	12/4/12	5/19/17	Contig	San Diego State University	SAMN02470875	GCA_000316965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/965/GCA_000316965.1_313	-	313
Streptomyces sp. HCCB10043	1396518	PRJNA217952	217952	Terrabacteria group	Actinobacteria	6.68753	70.9	-	AWOQ01	1508	6828	5613	11/25/13	3/9/17	Contig	Shanghai Laiyi Center for Biopharmaceuticals R&D	SAMN02470969	GCA_000498935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/935/GCA_000498935.1_HCCB10043	-	HCCB10043
Bacillus sp. MN5	368294	PRJNA325890	325890	Terrabacteria group	Firmicutes	5.51324	35.2	-	MACE01	91	5899	5613	11/18/16	4/17/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05231549	GCA_001883995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/995/GCA_001883995.1_ASM188399v1	-	Mn5
Acinetobacter sp. C15	1661746	PRJNA285410	285410	Proteobacteria	Gammaproteobacteria	3.53523	42.7	-	LDWD01	205	3336	3216	8/31/15	4/6/17	Contig	University of Queensland	SAMN03753649	GCA_001276505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/505/GCA_001276505.1_ASM127650v1	-	C15
Clostridium sp. CAG:505	1262814	PRJEB908	206943	Terrabacteria group	Firmicutes	2.14683	45.7	-	CBHJ01	136	2123	2091	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138693	GCA_000436155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/155/GCA_000436155.1_MGS505	-	-
Enterobacter sp. PDC34	1881029	PRJEB18393	355729	Proteobacteria	Gammaproteobacteria	4.68322	54.5	-	FRCI01	18	4550	4372	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05428986	GCA_900142835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/835/GCA_900142835.1_IMG-taxon_2690315661_annotated_assembly	-	PDC34
Staphylococcus sp. HMSC069E07	1715214	PRJNA296343	296343	Terrabacteria group	Firmicutes	2.44178	32.6	-	LTPB01	110	2369	2271	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498666	GCA_001837495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/495/GCA_001837495.1_ASM183749v1	-	HMSC069E07
Streptococcus sp. KR	1979528	PRJNA375758	375758	Terrabacteria group	Firmicutes	2.25551	39.3	-	NGVM01	425	2216	2009	8/1/17	8/21/17	Contig	SysMilk	SAMN06718505	GCA_002238115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/115/GCA_002238115.1_ASM223811v1	-	KR
Prevotella sp. UBA2742	1947104	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.40493	53.5	-	DEJS01	22	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06454044	GCA_002353485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/485/GCA_002353485.1_ASM235348v1	28894102	-
Mycobacterium sp. E787	1834150	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.72474	68.9	-	LZKL01	133	5401	5160	6/17/16	4/13/17	Contig	JCVI	SAMN04634243	GCA_001668725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/668/725/GCA_001668725.1_ASM166872v1	-	E787
Paenibacillus sp. YK5	206394	PRJDB879	243763	Terrabacteria group	Firmicutes	5.22145	49.9	-	BBEC01	182	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016812	GCA_001312585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/585/GCA_001312585.1_ASM131258v1	-	JCM 16163
Prochlorococcus sp. scB245a_521O20	1471531	PRJNA239873	239873	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.51636	31.2	-	JFOD01	139	-	-	4/22/14	4/28/14	Scaffold	Massachusetts Institute of Technology	SAMN02671402	GCA_000635255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/255/GCA_000635255.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Prochlorococcus sp. scB241_529J11	1471465	PRJNA239833	239833	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.33823	31.5	-	JFLP01	205	-	-	4/22/14	4/28/14	Scaffold	Massachusetts Institute of Technology	SAMN02671336	GCA_000635435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/435/GCA_000635435.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Paenibacillus sp. JCM 18996	1301085	PRJDB911	243782	Terrabacteria group	Firmicutes	3.83894	49.9	-	BBFE01	105	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016826	GCA_001313085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/085/GCA_001313085.1_ASM131308v1	-	JCM 18996
Mycobacterium sp. 1245852.3	1856860	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.1476	67.6	-	LZLL01	640	6019	5350	6/17/16	4/13/17	Contig	JCVI	SAMN05202165	GCA_001669335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/335/GCA_001669335.1_ASM166933v1	-	1245852.3
Prevotella sp. UBA2740	1947103	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.23344	47.5	-	DEJU01	111	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06454042	GCA_002353515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/515/GCA_002353515.1_ASM235351v1	28894102	-
Streptococcus sp. FDAARGOS_256	1975706	PRJNA231221	231221	Terrabacteria group	Firmicutes	1.99516	41.5	-	NTGM01	2	2016	1864	9/11/17	9/13/17	Contig	US Food and Drug Administration 	SAMN04875582	GCA_002289235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/235/GCA_002289235.1_ASM228923v1	-	FDAARGOS_256
Staphylococcus sp. HMSC069E09	1715063	PRJNA296191	296191	Terrabacteria group	Firmicutes	2.62424	33.7	-	LTPA01	36	2506	2419	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498592	GCA_001837525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/525/GCA_001837525.1_ASM183752v1	-	HMSC069E09
Enterobacter sp. NFR05	1566259	PRJEB19763	377465	Proteobacteria	Gammaproteobacteria	5.51374	53.1	-	FVZI01	31	5305	5094	3/11/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159434	GCA_900168315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/315/GCA_900168315.1_IMG-taxon_2609459761_annotated_assembly	-	NFR05
Clostridium sp. CAG:62	1262828	PRJEB961	206900	Terrabacteria group	Firmicutes	2.70565	40.7	-	CBHQ01	102	2482	2452	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138694	GCA_000436175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/175/GCA_000436175.1_MGS62	-	-
Acinetobacter sp. FDAARGOS_131	1876769	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.12759	38.7	-	LORV01	8	3928	3673	12/21/15	4/6/17	Contig	US Food and Drug Administration 	SAMN03996275	GCA_001471615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/615/GCA_001471615.1_ASM147161v1	-	FDAARGOS_131
Bacillus sp. EB422	1120337	PRJNA325889	325889	Terrabacteria group	Firmicutes	5.41679	35.2	-	MACD01	102	5768	5492	11/18/16	4/16/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05231547	GCA_001884025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/025/GCA_001884025.1_ASM188402v1	-	EB422
Streptomyces sp. PRh5	1158056	PRJNA233446	233446	Terrabacteria group	Actinobacteria	11.0842	71.1	-	JABQ01	290	9254	8490	3/12/14	3/9/17	Contig	Jiangxi Normal University	SAMN02951919	GCA_000590515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/515/GCA_000590515.1_Streptomyces_sp._PRh5_version1.0	24744320	PRh5
Pseudomonas sp. M1	95619	PRJNA62721	62721	Proteobacteria	Gammaproteobacteria	6.98243	67.3	-	ANIR02	4	6165	5992	12/5/12	4/17/17	Contig	University of Minho	SAMN02471891	GCA_000317185.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/185/GCA_000317185.3_M1_v2.0	"1,038,867,823,405,290"	M1
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.67563	55.5	-	LEDB01	33	4505	4327	6/9/15	3/26/17	Contig	JCVI	SAMN03732730	GCA_001022935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/935/GCA_001022935.1_ASM102293v1	-	GN03041
Acinetobacter pittii	48296	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.97086	38.7	-	NGJC01	40	3783	3662	5/16/17	5/24/17	Contig	JCVI	SAMN06892259	GCA_002145415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/145/415/GCA_002145415.1_ASM214541v1	-	ARLG1875
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.20183	67.4	-	LPEF01	93	6500	6142	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449453	GCA_001529155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/155/GCA_001529155.1_ASM152915v1	-	MSMB1215WGS
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.55805	63.9	-	DFRP01	10	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452985	GCA_002378715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/715/GCA_002378715.1_ASM237871v1	28894102	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98552	64.2	-	FRYM01	31	4952	4810	12/14/16	3/21/17	Contig	SC	SAMEA2071252	GCA_900130445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/445/GCA_900130445.1_10625_5_81	-	166
Cronobacter sakazakii	28141	PRJNA329459	329459	Proteobacteria	Gammaproteobacteria	4.16413	57.7	-	MBRV01	617	4030	3739	4/17/17	4/21/17	Scaffold	Guangdong Institute of Microbiology	SAMN05412998	GCA_002094595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/595/GCA_002094595.1_ASM209459v1	28057934	cro909W
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.96197	55.1	-	JYLR01	40	4924	4681	3/13/15	3/25/17	Scaffold	University of Minnesota	SAMN03333142	GCA_000952275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/275/GCA_000952275.1_ASM95227v1	26438492	MNCRE41
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.51164	32.6	-	CUWC01	55	2452	2349	3/31/15	3/26/17	Scaffold	SC	SAMEA1035094	GCA_001234585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/585/GCA_001234585.1_7068_7_17	-	F01
Burkholderia sp. JGI 0001005-I06	1268350	PRJNA183584	183584	Proteobacteria	Betaproteobacteria	0.437773	60.1	-	AXXX01	55	-	-	10/25/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441433	GCA_000483185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/185/GCA_000483185.1_ASM48318v1	-	JGI 0001005-I06
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.70799	31.4	-	LBDW01	51	1766	1678	10/27/15	3/18/17	Contig	FDA	SAMN03344568	GCA_001416875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/875/GCA_001416875.1_ASM141687v1	-	CVM N44984F
Lactobacillus plantarum	1590	PRJNA283610	283610	Terrabacteria group	Firmicutes	3.23647	44.4	-	LEBQ01	51	3139	2971	12/3/16	3/28/17	Contig	"Faculty of Agro-industry, Prince of Songkla University, wageningen university"	SAMN03654470	GCA_001888345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/345/GCA_001888345.1_ASM188834v1	-	P26
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.10777	60.1	-	FCKM01	32	4799	4641	1/21/16	3/27/17	Scaffold	SC	SAMEA2274032	GCA_001536665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/665/GCA_001536665.1_12082_3_57	-	2880STDY5682960
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.53876	46.8	-	CTIM01	118	4304	4026	3/26/15	3/26/17	Scaffold	SC	SAMEA980162	GCA_001219745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/745/GCA_001219745.1_4976_1_6	-	YE119/02
Corynebacterium diphtheriae bv. mitis	1806053	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.39567	53.6	-	LSVR01	48	2315	2108	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496961	GCA_002203295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/295/GCA_002203295.1_S33	-	728
Rickettsia australis str. Cutlack	1105110	PRJNA75037	75037	Proteobacteria	Alphaproteobacteria	1.32328	32.3282	chromosome:NC_017058.1/CP003338.1; plasmid pMC5_1:NC_017041.1/CP003339.1	-	2	1475	1185	3/1/12	4/7/17	Complete Genome	Los Alamos National Laboratory	SAMN02603558	GCA_000284155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/155/GCA_000284155.1_ASM28415v1	-	Cutlack
Brucella melitensis	29459	PRJNA380526	380526	Proteobacteria	Alphaproteobacteria	3.28813	57.2	-	NCRI01	46	3367	3137	6/21/17	6/24/17	Contig	Institute for Medical Research	SAMN06687275	GCA_002204345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/345/GCA_002204345.1_ASM220434v1	-	BMM 19/15
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.16018	41.1	-	CVZR01	75	2108	1930	6/24/15	3/26/17	Contig	SC	SAMEA1032915	GCA_001177605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/605/GCA_001177605.1_6903_2_23	-	EQUI0072
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.81408	66.2	-	JUMG01	269	4416	4287	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198172	GCA_001075485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/485/GCA_001075485.1_ASM107548v1	26230489	952_SMAL
Enterococcus faecium EnGen0047	1138926	PRJNA82503	82503	Terrabacteria group	Firmicutes	2.74374	38.4	-	AHYB01	5	2706	2536	12/17/12	4/10/17	Scaffold	Broad Institute	SAMN00779841	GCA_000322305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/305/GCA_000322305.1_Ente_faec_E3548_V1	-	E3548
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14386	52.4	-	CQOB01	73	2506	2186	3/22/15	4/11/17	Contig	SC	SAMEA1690353	GCA_001126805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/805/GCA_001126805.1_8727_8_49	-	GCGS145
Streptococcus mutans NLML1	857114	PRJNA49835	49835	Terrabacteria group	Firmicutes	2.03603	36.6	-	AHSW01	139	1952	1837	2/11/13	3/23/17	Contig	Cornell University	SAMN02429023	GCA_000340075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/075/GCA_000340075.1_ASM34007v1	23228887	NLML1
Enterococcus faecalis EnGen0099	1157361	PRJNA88223	88223	Terrabacteria group	Firmicutes	3.26317	37.1	-	AIRC01	39	3439	3273	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808925	GCA_000391405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/405/GCA_000391405.1_Ente_faec_B3031_V1	-	B3031
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	4.30806	27.8	-	LFPK01	30	4075	3885	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779991	GCA_001573775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/775/GCA_001573775.1_ASM157377v1	26939550	AM553
Francisella tularensis subsp. novicida	264	PRJNA240119	240119	Proteobacteria	Gammaproteobacteria	2.04703	32.3139	chromosome:NZ_CP010103.1/CP010103.1; plasmid unnamed:NZ_CP010104.1/CP010104.1	-	2	2005	1879	2/9/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN02769653	GCA_000834965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/834/965/GCA_000834965.1_ASM83496v1	25931589	DPG 3A-IS
Bacillus subtilis	1423	PRJNA266797	266797	Terrabacteria group	Firmicutes	4.01642	43.4	-	JXHL01	68	4275	4030	2/2/15	3/25/17	Scaffold	TIFN	SAMN03174419	GCA_000830605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/605/GCA_000830605.1_ASM83060v1	26988043	B4069
Vibrio parahaemolyticus S141	1394675	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.10476	45.3	-	AWIL01	505	4866	4653	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338989	GCA_000489635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/635/GCA_000489635.1_S141	-	S141
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.88749	37.8	-	MLOD01	302	1928	1682	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297095	GCA_001868975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/868/975/GCA_001868975.1_ASM186897v1	27118061	AWRIB581
Xanthomonas oryzae pv. oryzicola	129394	PRJNA269490	269490	Proteobacteria	Gammaproteobacteria	4.38481	64.1	-	JXHI01	276	4215	3433	1/3/17	3/28/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03252512	GCA_001929305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/305/GCA_001929305.1_ASM192930v1	-	BXOR1
Brucella abortus 63/59	1160183	PRJNA173584	173584	Proteobacteria	Alphaproteobacteria	3.28638	57.2	-	AQLJ01	5	3381	3146	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811192	GCA_000366605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/605/GCA_000366605.1_Bruc_abor_63_59_V1	-	63/59
Francisella tularensis subsp. holarctica	119857	PRJNA285142	285142	Proteobacteria	Gammaproteobacteria	1.82993	32.2	-	MRBB01	98	1977	1552	4/20/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773883	GCA_002102465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/465/GCA_002102465.1_ASM210246v1	27356883	FDC409
Clostridioides difficile DA00141	1151328	PRJNA85831	85831	Terrabacteria group	Firmicutes	4.08973	28.8	-	AVJC01	52	3783	3613	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766643	GCA_000450105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/105/GCA_000450105.2_ASM45010v2	-	DA00141
Vibrio cholerae O1 str. Nep-21113	1095643	PRJNA76221	76221	Proteobacteria	Gammaproteobacteria	4.04242	47.5	-	APGF01	100	3857	3695	3/22/13	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00989309	GCA_000348485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/485/GCA_000348485.2_ASM34848v2	-	Nep-21113
Bacillus thuringiensis	1428	PRJNA270906	270906	Terrabacteria group	Firmicutes	6.36548	34.7	-	JWST01	52	6918	6391	1/8/15	4/3/17	Scaffold	Indian Agricultural Research Institute	SAMN03271686	GCA_000816555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/555/GCA_000816555.1_ASM81655v1	-	AK47
Chlamydia trachomatis	813	PRJEB2035	203744	PVC group	Chlamydiae	1.37373	41.9	-	CVPJ01	1611	1133	1103	5/14/15	5/14/15	Scaffold	SC	SAMEA1483360	GCA_001047735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/735/GCA_001047735.1_8036_1_21	-	H34IMS
Burkholderia pseudomallei TSV 31	1434204	PRJNA230738	230738	Proteobacteria	Betaproteobacteria	7.30062	68	-	JPVE01	2	7516	6946	11/11/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02948394	GCA_000774485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/485/GCA_000774485.1_BCW_20	25676747	TSV 31
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.25941	66.9	-	MUVB01	180	7953	7504	2/10/17	4/2/17	Contig	University of British Columbia	SAMN05001961	GCA_001992955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/955/GCA_001992955.1_ASM199295v1	-	VC4640
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.85465	50.7	-	NQDE01	79	5030	4753	9/20/17	9/22/17	Contig	JCVI	SAMN07450648	GCA_002317915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/915/GCA_002317915.1_ASM231791v1	-	ECFood+09
Legionella pneumophila serogroup 1	66976	PRJDB4906	325623	Proteobacteria	Gammaproteobacteria	3.3451	38.3	-	BDFI01	45	3064	2962	6/11/16	3/28/17	Contig	Hokkaido University	SAMD00053589	GCA_001685545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/545/GCA_001685545.1_ASM168554v1	-	Lp01
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.28042	58.5	-	MTZC01	322	6104	5511	4/27/17	5/3/17	Contig	Massey University	SAMN06197086	GCA_002111985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/985/GCA_002111985.1_ASM211198v1	28369338	NZ41
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.28767	40.8	-	CEEC01	108	2315	2140	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233921	GCA_000937535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/535/GCA_000937535.1_Velvet_assembly	-	LS4P
Streptococcus agalactiae GB00202	1154906	PRJNA86485	86485	Terrabacteria group	Firmicutes	2.04083	35.3	-	ALTA01	27	2100	1985	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991147	GCA_000289515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/515/GCA_000289515.1_ASM28951v1	-	GB00202
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	4.04807	38.8	-	JSCW01	49	3933	3789	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068270	GCA_000804955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/955/GCA_000804955.1_ASM80495v1	25487793	2004ZJAB5
Pseudomonas aeruginosa C41	1402575	PRJNA219937	219937	Proteobacteria	Gammaproteobacteria	6.8256	66	-	AXOS01	3	6520	6359	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360747	GCA_000480455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/455/GCA_000480455.1_Pseu_aeru_3569_V1	-	C41
Shigella flexneri 2002028	1434162	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.39809	50.5	-	AZPO01	297	4867	4038	1/29/14	3/5/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437397	GCA_000566185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/185/GCA_000566185.1_ASM56618v1	-	2002028
Bacillus anthracis	1392	PRJNA264742	264742	Terrabacteria group	Firmicutes	5.27409	35.2	-	JSZS01	54	5811	5513	11/14/14	3/25/17	Scaffold	Georgia Institute of Technology	SAMN03165117	GCA_000782995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/995/GCA_000782995.1_ASM78299v1	-	2000031052
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.77196	35	-	JQOR01	338	4347	3888	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949562	GCA_001567735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/735/GCA_001567735.1_ASM156773v1	26833181	200509
Streptococcus pyogenes ABC020056898	1439277	PRJNA233091	233091	Terrabacteria group	Firmicutes	1.89518	38.5	-	JJHT01	2	1975	1844	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567440	GCA_000631045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/045/GCA_000631045.1_Stre_pyog_ABC020056898_V1	-	ABC020056898
Neisseria meningitidis 93004	1069609	PRJNA70993	70993	Proteobacteria	Betaproteobacteria	2.33639	51.3	-	ALXN01	44	2724	2242	8/27/12	3/21/17	Contig	Institute for Genome Sciences	SAMN00849775	GCA_000293245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/245/GCA_000293245.1_ASM29324v1	-	93004
Helicobacter pylori GAM244Ai	1159035	PRJNA89241	89241	Proteobacteria	delta/epsilon subdivisions	1.59327	39.3	-	APDK01	64	1588	1416	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436692	GCA_000345225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/225/GCA_000345225.2_ASM34522v2	-	GAM244Ai
Streptococcus pneumoniae GA07643	760755	PRJNA48667	48667	Terrabacteria group	Firmicutes	2.12774	39.8	-	AGOT01	6	2320	2018	10/25/11	3/9/17	Contig	Institute for Genome Sciences	SAMN00792725	GCA_000232445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/445/GCA_000232445.2_ASM23244v2	-	GA07643
Geminocystis sp. NIES-3708	1615909	PRJDB3512	278941	Terrabacteria group	Cyanobacteria/Melainabacteria group	4.04208	32.3045	chromosome Unknown:NZ_AP014815.1/AP014815.1; plasmid pGM01:NZ_AP014816.1/AP014816.1; plasmid pGM02:NZ_AP014817.1/AP014817.1; plasmid pGM03:NZ_AP014818.1/AP014818.1; plasmid pGM04:NZ_AP014819.1/AP014819.1; plasmid pGM05:NZ_AP014820.1/AP014820.1	-	6	3577	3376	3/18/15	4/11/17	Complete Genome	Toyohashi University of Technology	SAMD00025579	GCA_001548095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/095/GCA_001548095.1_Gm3709_assembly_1.0	25953174	NIES-3708
Mycobacterium tuberculosis PanR0403	1346773	PRJNA208597	208597	Terrabacteria group	Actinobacteria	4.40086	65.449	chromosome:NZ_CM002065.1/CM002065.1	ATEE01	1	4279	4052	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471082	GCA_000443595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/595/GCA_000443595.1_fedora0403_IS	23884993	PanR0403
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.82808	37.9	-	FFIF01	17	1842	1702	2/9/16	3/27/17	Scaffold	SC	SAMEA2674736	GCA_900041425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/425/GCA_900041425.1_14412_4_19	-	2842STDY5882047
Mycobacterium avium	1764	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.24717	69.1	-	NSFF01	101	4974	4718	9/12/17	9/14/17	Contig	University of Michigan Medical School	SAMN07528786	GCA_002292505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/505/GCA_002292505.1_ASM229250v1	-	FLAC0161
Bacillus cereus HuA2-9	1053204	PRJNA70373	70373	Terrabacteria group	Firmicutes	5.83756	35.3	-	AHDY01	8	6032	5639	5/16/13	4/10/17	Scaffold	Broad Institute	SAMN02596836	GCA_000398985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/985/GCA_000398985.1_Baci_cere_HuA2-9_V1	-	HuA2-9
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.38213	32	-	JUNZ01	258	2347	2215	7/10/15	3/26/17	Contig	University of Washington	SAMN03198127	GCA_001075255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/255/GCA_001075255.1_ASM107525v1	26230489	916_SEPI
Seonamhaeicola sp. S2-3	1936081	PRJNA362242	362242	FCB group	Bacteroidetes/Chlorobi group	3.75284	32.3	chromosome:NZ_CP019389.1/CP019389.1	-	1	3281	3173	1/26/17	4/17/17	Complete Genome	Korea Research Institute of Bioscience & Biotechnology	SAMN06236790	GCA_001971785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/785/GCA_001971785.1_ASM197178v1	-	S2-3
Yersinia pestis PY-55	992157	PRJNA64341	64341	Proteobacteria	Gammaproteobacteria	4.75301	47.5	-	AKSQ01	471	4623	4268	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141478	GCA_000268825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/825/GCA_000268825.1_ASM26882v1	-	PY-55
Campylobacter jejuni subsp. jejuni D2600	1093789	PRJNA73887	73887	Proteobacteria	delta/epsilon subdivisions	1.62241	30.5	-	AGTF01	51	1687	1582	11/4/11	3/15/17	Scaffold	"Comparative Enteric Diseases Laboratory, Michigan State University"	SAMN02470551	GCA_000234545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/545/GCA_000234545.1_ASM23454v1	23012285	D2600
Francisella noatunensis subsp. orientalis	299583	PRJNA352676	352676	Proteobacteria	Gammaproteobacteria	1.85433	32.3	chromosome:NZ_CP018051.1/CP018051.1	-	1	1889	1448	11/22/16	4/5/17	Complete Genome	Londrina State University	SAMN05990858	GCA_001885275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/275/GCA_001885275.1_ASM188527v1	-	F1
Francisella tularensis subsp. tularensis	119856	PRJNA341509	341509	Proteobacteria	Gammaproteobacteria	1.89018	32.3	chromosome:NZ_CP017154.1/CP017154.1	-	1	1926	1663	9/16/16	4/5/17	Complete Genome	BEI Resources/American Type Culture Collection (ATCC)	SAMN05725749	GCA_001729565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/565/GCA_001729565.1_ASM172956v1	-	NR-21736
Francisella tularensis subsp. tularensis	119856	PRJNA341509	341509	Proteobacteria	Gammaproteobacteria	1.88978	32.3	chromosome:NZ_CP017155.1/CP017155.1	-	1	1927	1664	9/16/16	4/5/17	Complete Genome	BEI Resources/American Type Culture Collection (ATCC)	SAMN05725750	GCA_001729585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/585/GCA_001729585.1_ASM172958v1	-	NR-21737
Francisella tularensis subsp. tularensis	119856	PRJNA341509	341509	Proteobacteria	Gammaproteobacteria	1.89004	32.3	chromosome:NZ_CP017153.1/CP017153.1	-	1	1928	1663	9/16/16	4/5/17	Complete Genome	BEI Resources/American Type Culture Collection (ATCC)	SAMN05725748	GCA_001729605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/605/GCA_001729605.1_ASM172960v1	-	NR-21734
Campylobacter jejuni subsp. jejuni P854	1151115	PRJNA162733	162733	Proteobacteria	delta/epsilon subdivisions	1.74727	30.1	-	AKFN01	146	1879	1737	7/31/12	3/15/17	Scaffold	University of Birmingham	SAMN02471608	GCA_000283215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/215/GCA_000283215.1_ASM28321v1	-	P854
Yersinia pestis PY-56	992158	PRJNA64343	64343	Proteobacteria	Gammaproteobacteria	4.65057	47.5	-	AKSR01	616	4598	4207	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141479	GCA_000268845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/845/GCA_000268845.1_ASM26884v1	-	PY-56
Francisella tularensis subsp. tularensis MA00-2987	543737	PRJNA261847	261847	Proteobacteria	Gammaproteobacteria	1.89264	32.3	chromosome:NZ_CP012372.1/CP012372.1	-	1	1925	1664	8/14/15	4/4/17	Complete Genome	Virginia Polytechnic Institute and State University	SAMN02595231	GCA_001267475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/475/GCA_001267475.1_ASM126747v1	-	MA00-2987
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.38782	32	-	JUNY01	192	2327	2211	7/10/15	3/26/17	Contig	University of Washington	SAMN03198128	GCA_001075295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/295/GCA_001075295.1_ASM107529v1	26230489	917_2_SEPI
Bacillus cereus BAG1X1-1	1053170	PRJNA70305	70305	Terrabacteria group	Firmicutes	6.54283	34.7	-	AHCQ01	13	6888	6387	5/16/13	3/24/17	Scaffold	Broad Institute	SAMN02596802	GCA_000399005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/005/GCA_000399005.1_Baci_cere_BAG1X1-1_G13150_V1	-	BAG1X1-1
Mycobacterium avium	1764	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.89137	68.6	-	NSFD01	101	5717	5379	9/12/17	9/14/17	Contig	University of Michigan Medical School	SAMN07528788	GCA_002292545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/545/GCA_002292545.1_ASM229254v1	-	FLAC0165
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.80879	37.9	-	FFIN01	12	1766	1626	2/9/16	3/27/17	Scaffold	SC	SAMEA2674764	GCA_900044685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/685/GCA_900044685.1_14412_4_47	-	2842STDY5882075
Mycobacterium tuberculosis PanR0402	1346774	PRJNA208596	208596	Terrabacteria group	Actinobacteria	4.41242	65.4498	chromosome:NZ_CM002066.1/CM002066.1	ATEF01	1	4305	4073	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471045	GCA_000443615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/615/GCA_000443615.1_fedora0402_IS	23884993	PanR0402
Francisella tularensis subsp. tularensis	119856	PRJNA288604	288604	Proteobacteria	Gammaproteobacteria	1.89814	32.3	chromosome:NZ_CP012037.1/CP012037.1	-	1	1919	1645	8/6/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03817044	GCA_001262115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/115/GCA_001262115.1_ASM126211v1	26383665	WY96
Streptococcus pneumoniae GA11426	760764	PRJNA48685	48685	Terrabacteria group	Firmicutes	2.18471	39.8	-	AGOV01	13	2401	2090	10/25/11	3/9/17	Contig	Institute for Genome Sciences	SAMN00792731	GCA_000232485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/485/GCA_000232485.2_ASM23248v2	-	GA11426
Helicobacter pylori GAM245Ai	1159036	PRJNA89243	89243	Proteobacteria	delta/epsilon subdivisions	1.6485	39.1	-	APDL01	49	1609	1442	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436847	GCA_000345245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/245/GCA_000345245.2_ASM34524v2	-	GAM245Ai
Neisseria meningitidis 93003	1069608	PRJNA70991	70991	Proteobacteria	Betaproteobacteria	2.23895	51.6	-	ALXM01	24	2577	2181	8/27/12	3/21/17	Contig	Institute for Genome Sciences	SAMN00849774	GCA_000293265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/265/GCA_000293265.1_ASM29326v1	-	93003
Streptococcus pyogenes ABC020056891	1439275	PRJNA233090	233090	Terrabacteria group	Firmicutes	1.8974	38.6	-	JJHU01	2	1977	1844	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567439	GCA_000631065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/065/GCA_000631065.1_Stre_pyog_ABC020056891_V1	-	ABC020056891
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.78436	35	-	JQOT01	287	4352	3932	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949568	GCA_001567745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/745/GCA_001567745.1_ASM156774v1	26833181	CMCC-1
Bacillus anthracis	1392	PRJNA264742	264742	Terrabacteria group	Firmicutes	5.35337	35.1	-	JSZT01	46	5951	5597	11/14/14	3/25/17	Scaffold	Georgia Institute of Technology	SAMN03165118	GCA_000783015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/015/GCA_000783015.1_ASM78301v1	-	2000031075
Shigella flexneri 2002069	1434163	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.3309	50.7	-	AZPP01	274	4781	4120	1/29/14	2/23/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437398	GCA_000566205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/205/GCA_000566205.1_ASM56620v1	-	2002069
Pseudomonas aeruginosa C40	1402574	PRJNA219936	219936	Proteobacteria	Gammaproteobacteria	6.63126	66.2	-	AXOT01	4	6295	6144	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360746	GCA_000480475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/475/GCA_000480475.1_Pseu_aeru_3568_V1	-	C40
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	4.0454	38.8	-	JSCX01	61	3944	3779	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068271	GCA_000804965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/965/GCA_000804965.1_ASM80496v1	25487793	2004ZJAB6
Streptococcus agalactiae GB00206	1154907	PRJNA86487	86487	Terrabacteria group	Firmicutes	2.18132	35.5	-	ALTB01	33	2238	2107	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991148	GCA_000289535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/535/GCA_000289535.1_ASM28953v1	-	GB00206
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.15609	41.2	-	CEJO01	132	2167	2036	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233966	GCA_000937555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/555/GCA_000937555.1_Velvet_assembly	-	LSK
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.26207	58.5	-	MTZD01	322	6107	5515	4/27/17	5/3/17	Contig	Massey University	SAMN06197087	GCA_002112005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/005/GCA_002112005.1_ASM211200v1	28369338	NZ42
Legionella pneumophila serogroup 1	66976	PRJDB4907	325624	Proteobacteria	Gammaproteobacteria	3.3267	38.3	-	BDFJ01	44	3039	2938	6/11/16	3/28/17	Contig	Hokkaido University	SAMD00053588	GCA_001685575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/575/GCA_001685575.1_ASM168557v1	-	JR32
Shigella sonnei	624	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.60665	50.9	-	NQBK01	116	4825	4411	9/20/17	9/22/17	Contig	JCVI	SAMN07450644	GCA_002317945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/945/GCA_002317945.1_ASM231794v1	-	ECLC+04
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.03127	66.9	-	MUVC01	215	7746	7281	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001962	GCA_001992965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/965/GCA_001992965.1_ASM199296v1	-	VC5080
Burkholderia pseudomallei ABCPW 30	1434208	PRJNA230742	230742	Proteobacteria	Betaproteobacteria	7.39373	68	-	JPVF01	2	7653	7086	11/11/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02948395	GCA_000774495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/495/GCA_000774495.1_BCW_24	25676747	ABCPW 30
Chlamydia trachomatis	813	PRJEB2281	203906	PVC group	Chlamydiae	2.08267	38.7	-	CSTN01	2429	1487	1444	3/24/15	6/13/15	Scaffold	SC	SAMEA757093	GCA_001213105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/105/GCA_001213105.1_5833_5_5	-	SwabB8
Bacillus thuringiensis	1428	PRJNA284555	284555	Terrabacteria group	Firmicutes	6.71939	34.8	-	LDEU01	166	7142	6602	8/31/15	4/4/17	Scaffold	State Key Laboratory of Agricultural Microbiology	SAMN03703411	GCA_001276195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/195/GCA_001276195.1_ASM127619v1	26231642	BMB3201
Vibrio cholerae O1 str. PCS-023	1095639	PRJNA76213	76213	Proteobacteria	Gammaproteobacteria	4.03159	47.5	-	APGG01	86	3851	3681	3/22/13	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00989306	GCA_000348505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/505/GCA_000348505.2_ASM34850v2	-	PCS-023
Clostridioides difficile DA00142	1151329	PRJNA85833	85833	Terrabacteria group	Firmicutes	4.18307	28.3	-	AVJD01	193	3861	3676	8/20/13	3/15/17	Contig	Institute for Genome Sciences	SAMN01766645	GCA_000450125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/125/GCA_000450125.1_ASM45012v1	-	DA00142
Francisella tularensis subsp. holarctica	119857	PRJNA285142	285142	Proteobacteria	Gammaproteobacteria	1.82397	32.2	-	MRAZ01	97	1939	1555	4/20/17	4/22/17	Contig	FOI Swedish Defence Research Agency	SAMN03773881	GCA_002102515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/515/GCA_002102515.1_ASM210251v1	27356883	FDC407
Brucella abortus NI518	1160161	PRJNA173554	173554	Proteobacteria	Alphaproteobacteria	3.28649	57.2	-	AQMP01	2	3377	3154	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811195	GCA_000366645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/645/GCA_000366645.1_Bruc_abor_NI518_V1	-	NI518
Xanthomonas oryzae pv. oryzae	64187	PRJNA268903	268903	Proteobacteria	Gammaproteobacteria	4.53361	63.8	-	JTKM01	950	4411	3488	1/28/17	4/11/17	Contig	Institut de Recherche pour le Developpement	SAMN03246761	GCA_001974485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/974/485/GCA_001974485.1_XOO_LMG9585_E1.0	-	LMG 9585
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.99449	37.9	-	MLOB01	333	2102	1803	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297093	GCA_001869005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/005/GCA_001869005.1_ASM186900v1	27118061	AWRIB541
Vibrio parahaemolyticus S140	1394674	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.12797	45.2	-	AWIM01	549	4879	4647	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338988	GCA_000489655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/655/GCA_000489655.1_S140	-	S140
Bacillus subtilis	1423	PRJNA266797	266797	Terrabacteria group	Firmicutes	3.96295	43.4	-	JXHK01	101	4192	3911	2/2/15	3/25/17	Scaffold	TIFN	SAMN03174418	GCA_000830635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/635/GCA_000830635.1_ASM83063v1	26988043	B4068
Francisella noatunensis subsp. orientalis	299583	PRJNA275870	275870	Proteobacteria	Gammaproteobacteria	1.86244	32.3	chromosome:NZ_CP012153.2/CP012153.2	-	1	1900	1452	8/3/15	8/24/17	Complete Genome	Universidade Federal de Minas Gerais	SAMN03354399	GCA_001190905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/190/905/GCA_001190905.2_ASM119090v2	26798105	FNO01
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.99794	27.2	-	LFQW01	114	3689	3529	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779997	GCA_001573795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/795/GCA_001573795.1_ASM157379v1	26939550	K15
Enterococcus faecalis EnGen0113	1157362	PRJNA88225	88225	Terrabacteria group	Firmicutes	3.23366	37.2	-	AIRD01	44	3406	3212	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808926	GCA_000391425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/425/GCA_000391425.1_Ente_faec_B3042_V1	-	B3042
Streptococcus mutans 1ID3	857154	PRJNA49755	49755	Terrabacteria group	Firmicutes	1.87237	36.9	-	AHSX01	90	1836	1749	2/11/13	3/23/17	Contig	Cornell University	SAMN02429024	GCA_000340095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/095/GCA_000340095.1_ASM34009v1	23228887	1ID3
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14475	52.4	-	CQLW01	64	2523	2182	3/23/15	4/11/17	Contig	SC	SAMEA1690334	GCA_001129585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/585/GCA_001129585.1_8727_8_95	-	GCGS191
Enterococcus faecium EnGen0048	1138929	PRJNA82509	82509	Terrabacteria group	Firmicutes	2.64689	38.4	-	AHYE01	19	2684	2403	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779845	GCA_000322325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/325/GCA_000322325.1_Ente_faec_E4215_V1	-	E4215
Stenotrophomonas maltophilia	40324	PRJNA312840	312840	Proteobacteria	Gammaproteobacteria	4.55662	66.5	-	LTAC01	115	4141	4025	3/22/16	4/5/17	Scaffold	University of Houston	SAMN04507546	GCA_001595975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/975/GCA_001595975.1_ASM159597v1	-	CBF10-1
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.09302	41.4	-	CWAL01	78	2040	1868	6/24/15	3/26/17	Contig	SC	SAMEA1032916	GCA_001177625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/625/GCA_001177625.1_6903_3_38	-	EQUI0087
Brucella melitensis	29459	PRJNA380526	380526	Proteobacteria	Alphaproteobacteria	3.28837	57.2	-	NGAD01	41	3358	3127	8/9/17	8/12/17	Contig	Institute for Medical Research	SAMN06909303	GCA_002245205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/205/GCA_002245205.1_ASM224520v1	28774972	VRI 6856/11
Francisella noatunensis subsp. orientalis FNO12	1390363	PRJNA232116	232116	Proteobacteria	Gammaproteobacteria	1.85972	32.3	chromosome:CP011921.1	-	1	1951	1538	6/29/15	6/29/15	Complete Genome	"Aquacen - National Reference Laboratory for Aquatic Animal Diseases, Brazilian Ministry of Fisheries and Aquaculture and Laboratory of Cellular and Molecular Genetics, Federal University of Minas Gerais"	SAMN02469074	GCA_001042525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/525/GCA_001042525.1_ASM104252v1	-	FNO12
Corynebacterium diphtheriae bv. mitis	1806053	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.48881	53.6	-	LSVL01	36	2471	2254	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496954	GCA_002203315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/315/GCA_002203315.1_S24	-	176
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.44509	47	-	CTJC01	129	4145	3926	3/26/15	3/26/17	Scaffold	SC	SAMEA980160	GCA_001219785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/785/GCA_001219785.1_4976_1_8	-	YE08/03
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.14888	60	-	FCIJ01	32	4869	4702	1/21/16	3/27/17	Scaffold	SC	SAMEA2273955	GCA_001536685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/685/GCA_001536685.1_12082_2_86	-	2880STDY5682882
Lactobacillus plantarum	1590	PRJNA283610	283610	Terrabacteria group	Firmicutes	3.26275	44.5	-	LEBN01	46	3171	3018	12/3/16	3/28/17	Contig	"Faculty of Agro-industry, Prince of Songkla University, wageningen university"	SAMN03654478	GCA_001888355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/355/GCA_001888355.1_ASM188835v1	-	P62
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.71009	31.4	-	LBDS01	38	1769	1678	10/27/15	3/18/17	Contig	FDA	SAMN03344572	GCA_001416905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/905/GCA_001416905.1_ASM141690v1	-	CVM N47608F
Burkholderia sp. JGI 0001021-E08	1268316	PRJNA183550	183550	Proteobacteria	Betaproteobacteria	0.568302	59.7	-	AXYQ01	62	-	-	10/25/13	7/29/15	Scaffold	DOE Joint Genome Institute	SAMN02441089	GCA_000485395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/395/GCA_000485395.1_ASM48539v1	-	JGI 0001021-E08
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.54528	32.6	-	CUGW01	80	2514	2395	3/31/15	3/26/17	Scaffold	SC	SAMEA1035132	GCA_001235085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/085/GCA_001235085.1_7068_7_53	-	132337
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.95792	55.1	-	JYLU01	104	4925	4668	3/13/15	3/25/17	Scaffold	University of Minnesota	SAMN03333145	GCA_000952285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/285/GCA_000952285.1_ASM95228v1	26438492	MNCRE51
Cronobacter sakazakii	28141	PRJNA329459	329459	Proteobacteria	Gammaproteobacteria	4.3725	57.2	-	MBSC01	168	4193	3994	4/17/17	4/21/17	Scaffold	Guangdong Institute of Microbiology	SAMN05413005	GCA_002094755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/755/GCA_002094755.1_ASM209475v1	28057934	cro2819A3
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.20175	64.1	-	FVBM01	6	5310	5143	3/10/17	3/18/17	Contig	SC	SAMEA2071281	GCA_900130465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/465/GCA_900130465.1_10625_5_84	-	169
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.05745	64.2	-	DFRW01	54	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06456479	GCA_002378825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/825/GCA_002378825.1_ASM237882v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.16176	67.5	-	LPEI01	102	6429	6085	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449456	GCA_001529205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/205/GCA_001529205.1_ASM152920v1	-	MSMB1219WGS
Acinetobacter pittii	48296	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.06151	38.8	-	NDFE01	211	4038	3785	5/31/17	6/2/17	Contig	JCVI	SAMN06461816	GCA_002161985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/161/985/GCA_002161985.1_ASM216198v1	-	ABUH403
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.88534	55.5	-	LEEM01	53	4845	4632	6/9/15	3/26/17	Contig	JCVI	SAMN03732690	GCA_001023215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/215/GCA_001023215.1_ASM102321v1	-	GN02232
Pseudomonas sp. Lz4W	1206777	PRJNA170013	170013	Proteobacteria	Gammaproteobacteria	4.98291	58.7	-	AOGS01	42	4530	4424	3/11/13	5/19/17	Contig	Centre for Cellular and Molecular Biology	SAMN02469436	GCA_000346225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/225/GCA_000346225.1_PsyrLz4W1	23788547	Lz4W
Streptomyces sp. NTK 937	1487711	PRJNA244371	244371	Terrabacteria group	Actinobacteria	7.44486	71.9	-	JJOB01	3	6552	6125	6/5/14	3/9/17	Contig	Universidad de Oviedo	SAMN02725841	GCA_000698495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/495/GCA_000698495.1_NTK937	24994793	NTK 937
Bacillus sp. N24	576432	PRJNA325891	325891	Terrabacteria group	Firmicutes	5.21778	35.2	-	MACG01	78	5565	5311	11/18/16	4/17/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05231550	GCA_001884035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/035/GCA_001884035.1_ASM188403v1	-	N24
Acinetobacter sp. LMB-5	1609919	PRJNA309105	309105	Proteobacteria	Gammaproteobacteria	3.89031	38.7	-	LRDR01	146	3792	3628	1/26/16	4/6/17	Contig	East China University of Science and Technology	SAMN04420610	GCA_001541635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/635/GCA_001541635.1_ASM154163v1	-	LMB-5
Clostridium sp. CAG:1193	1262771	PRJEB699	206688	Terrabacteria group	Firmicutes	1.0669	25.6	-	CAYF01	63	1097	1080	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138698	GCA_000436255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/255/GCA_000436255.1_MGS1193	-	-
Enterobacter sp. B509	137719	PRJDA69987	69987	Proteobacteria	Gammaproteobacteria	4.31962	55.5	-	BADM01	1081	-	-	12/26/12	9/16/15	Contig	Kazusa DNA Research Institute	SAMD00036583	GCA_000333635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/635/GCA_000333635.1_ASM33363v1	-	B509
Staphylococcus sp. HMSC070A07	1715046	PRJNA296173	296173	Terrabacteria group	Firmicutes	2.44914	32	-	LTOZ01	75	2421	2303	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498578	GCA_001837535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/535/GCA_001837535.1_ASM183753v1	-	HMSC070A07
Streptococcus sp. 45	1855326	PRJEB16795	350909	Terrabacteria group	Firmicutes	1.86385	37.7	-	FNXZ01	14	1849	1774	10/29/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216460	GCA_900108865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/865/GCA_900108865.1_IMG-taxon_2654588198_annotated_assembly	-	45
Prevotella sp. UBA2739	1947102	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.81203	51.1	-	DEJV01	77	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06452051	GCA_002353525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/525/GCA_002353525.1_ASM235352v1	28894102	-
Mycobacterium sp. E2238	1834131	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.38224	67.9	-	LZKF01	264	5244	4870	6/17/16	4/13/17	Contig	JCVI	SAMN04634249	GCA_001672665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/665/GCA_001672665.1_ASM167266v1	-	E2238
Paenibacillus sp. RIFOXYA1_FULL_44_5	1801893	PRJNA288027	288027	Terrabacteria group	Firmicutes	1.65054	43.3	-	MHHN01	651	1766	1116	10/20/16	10/21/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314310	GCA_001806105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/105/GCA_001806105.1_ASM180610v1	27774985	-
Prochlorococcus sp. scB243_496M6	1471481	PRJNA239872	239872	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.97741	31.3	-	JFMF01	490	-	-	4/22/14	4/28/14	Scaffold	Massachusetts Institute of Technology	SAMN02671352	GCA_000635535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/635/535/GCA_000635535.1_De_novo_assembly_of_single-cell_genomes	24763590	-
Prochlorococcus sp. REDSEA-S23_B1	1811564	PRJNA289734	289734	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.05897	30.8	-	LUPU01	123	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534622	GCA_001627435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/435/GCA_001627435.1_ASM162743v1	27377622	-
Paenibacillus sp. UBA2072	1947022	PRJNA348753	348753	Terrabacteria group	Firmicutes	5.85679	52.3	-	DCZY01	251	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454680	GCA_002332515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/515/GCA_002332515.1_ASM233251v1	28894102	-
Mycobacterium sp. E2327	1834132	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.22157	68.2	-	LZKE01	258	6017	5638	6/17/16	4/13/17	Contig	JCVI	SAMN04634250	GCA_001672675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/675/GCA_001672675.1_ASM167267v1	-	E2327
Prevotella sp. UBA2746	1947107	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.10959	51.2	-	DEJO01	55	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06452408	GCA_002353555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/555/GCA_002353555.1_ASM235355v1	28894102	-
Streptococcus sp. 1171_SSPC	1579348	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.04273	41.7	-	JWAK01	45	2013	1913	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197128	GCA_001069335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/335/GCA_001069335.1_ASM106933v1	26230489	1171_SSPC
Staphylococcus sp. HMSC070D07	1715168	PRJNA296296	296296	Terrabacteria group	Firmicutes	2.53249	33.8	-	LWPZ01	35	2423	2330	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498647	GCA_001837575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/575/GCA_001837575.1_ASM183757v1	-	HMSC070D07
Enterobacter sp. MR1	1313264	PRJNA195633	195633	Proteobacteria	Gammaproteobacteria	4.63386	56.3	-	ARPV01	643	-	-	5/13/13	1/8/14	Contig	"Department of Biotechnology, Junagadh Agricultural University, Junagadh, Gujarat, INDIA"	SAMN02470116	GCA_000390385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/385/GCA_000390385.1_ASM39038v1	-	MR1
Clostridium sp. CAG:217	1262779	PRJEB763	206629	Terrabacteria group	Firmicutes	1.89694	53.5	-	CBDU01	72	1787	1748	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138701	GCA_000436335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/335/GCA_000436335.1_MGS217	-	-
Acinetobacter sp. ANC 4149	1806892	PRJNA312928	312928	Proteobacteria	Gammaproteobacteria	3.70639	44.1	-	LUAW01	72	3629	3396	4/4/16	4/6/17	Contig	National Institute of Public Health	SAMN04510421	GCA_001605895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/895/GCA_001605895.1_ASM160589v1	27392433	ANC 4149
Bacillus sp. 0711P9-1	857402	PRJNA325888	325888	Terrabacteria group	Firmicutes	5.66014	35.3	-	MACF01	152	5932	5653	11/18/16	4/17/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05231544	GCA_001884045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/045/GCA_001884045.1_ASM188404v1	-	0711P9-1
Streptomyces sp. NRRL B-11253	1463826	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.86476	72.1	-	JNWN01	138	7644	7314	7/1/14	3/9/17	Contig	University of Illinois	SAMN02645192	GCA_000716455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/455/GCA_000716455.1_ASM71645v1	-	NRRL B-11253
Pseudomonas sp. CBZ-4	1163065	PRJNA170785	170785	Proteobacteria	Gammaproteobacteria	6.49733	61.2	-	ANNV01	186	5905	5739	3/15/13	5/19/17	Contig	Harbin Institute of Technology	SAMN02469871	GCA_000346755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/755/GCA_000346755.1_CBZ-4	-	CBZ-4
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.66245	55.6	-	LEEN01	25	4459	4318	6/9/15	3/26/17	Contig	JCVI	SAMN03732689	GCA_001023225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/225/GCA_001023225.1_ASM102322v1	-	GN02227
Acinetobacter pittii	48296	PRJEB13690	319630	Proteobacteria	Gammaproteobacteria	3.92096	38.9	-	FKLP01	207	3789	3567	4/27/16	5/31/17	Contig	URMITE	SAMEA3939850	GCA_900080165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/165/GCA_900080165.1_ASM90008016v1	-	NDM-1
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.17188	67.3	-	LPEH01	97	6473	6139	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449455	GCA_001529215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/215/GCA_001529215.1_ASM152921v1	-	MSMB1218WGS
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.71117	63.6	-	DFVJ01	167	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451754	GCA_002379995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/995/GCA_002379995.1_ASM237999v1	28894102	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98549	64.2	-	FRYZ01	30	4948	4808	12/14/16	3/21/17	Contig	SC	SAMEA2070425	GCA_900130475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/475/GCA_900130475.1_10625_5_85	-	170
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.46786	56.6	-	NCTS01	76	4324	4106	4/20/17	4/22/17	Scaffold	FDA/CFSAN	SAMN06697626	GCA_002101425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/425/GCA_002101425.1_ASM210142v1	-	MOD1_GK792.3
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.66048	55.6	-	JYMG01	52	4480	4287	3/13/15	3/25/17	Scaffold	University of Minnesota	SAMN03333157	GCA_000952315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/315/GCA_000952315.1_ASM95231v1	26438492	MNCRE15
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.53051	32.6	-	CUFJ01	98	2532	2382	3/31/15	3/26/17	Scaffold	SC	SAMEA1035036	GCA_001235105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/105/GCA_001235105.1_7068_7_18	-	F0_34
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.92687	30.9	-	LBDV01	101	2056	1919	10/27/15	3/18/17	Contig	FDA	SAMN03344569	GCA_001416925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/925/GCA_001416925.1_ASM141692v1	-	CVM N45714F
Lactobacillus plantarum	1590	PRJNA283610	283610	Terrabacteria group	Firmicutes	3.2365	44.4	-	LEBM01	65	3136	2973	12/3/16	3/28/17	Contig	"Faculty of Agro-industry, Prince of Songkla University, wageningen university"	SAMN03654481	GCA_001888405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/405/GCA_001888405.1_ASM188840v1	-	P67
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.98885	60	-	FCKQ01	15	4759	4601	1/21/16	3/27/17	Scaffold	SC	SAMEA2274036	GCA_001536705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/705/GCA_001536705.1_12082_3_61	-	2880STDY5682964
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.38579	46.9	-	CTEZ01	138	4118	3871	3/26/15	3/26/17	Scaffold	SC	SAMEA980151	GCA_001220045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/045/GCA_001220045.1_4976_3_1	-	YE213/02
Corynebacterium diphtheriae bv. mitis	1806053	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.48923	53.6	-	LSVT01	58	2446	2259	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496963	GCA_002203335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/335/GCA_002203335.1_S36	-	847
Francisella noatunensis subsp. orientalis FNO24	1449091	PRJNA234502	234502	Proteobacteria	Gammaproteobacteria	1.86232	32.3	chromosome:CP011922.1	-	1	1952	1538	6/29/15	6/29/15	Complete Genome	"Aquacen - National Reference Laboratory for Aquatic Animal Diseases, Brazilian Ministry of Fisheries and Aquaculture and Laboratory of Cellular and Molecular Genetics, Federal University of Minas Gerais"	SAMN02584017	GCA_001042545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/545/GCA_001042545.1_ASM104254v1	-	FNO24
Brucella melitensis	29459	PRJNA380526	380526	Proteobacteria	Alphaproteobacteria	3.28872	57.2	-	NGAE01	32	3357	3130	8/9/17	8/12/17	Contig	Institute for Medical Research	SAMN06909302	GCA_002245225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/225/GCA_002245225.1_ASM224522v1	28774972	VRI 6530/11
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.1601	41.1	-	CWFO01	70	2110	1928	6/24/15	3/26/17	Contig	SC	SAMEA1032917	GCA_001177645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/645/GCA_001177645.1_6817_1_65	-	EQUI0018
Stenotrophomonas maltophilia	40324	PRJNA341407	341407	Proteobacteria	Gammaproteobacteria	4.95154	66.2	-	MTGD01	182	4649	4452	2/13/17	2/22/17	Scaffold	California Department of Public Health	SAMN05721779	GCA_001997185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/185/GCA_001997185.1_ASM199718v1	-	ATCC 13637
Enterococcus faecium EnGen0054	1138930	PRJNA82511	82511	Terrabacteria group	Firmicutes	2.80741	38.1	-	AHYF01	22	2821	2629	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779846	GCA_000322345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/345/GCA_000322345.1_Ente_faec_E1321_V1	-	E1321
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.09265	52.6	-	CQJX01	76	2459	2129	3/22/15	4/11/17	Contig	SC	SAMEA1690332	GCA_001129885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/885/GCA_001129885.1_8727_8_30	-	GCGS126
Streptococcus mutans 66-2A	857111	PRJNA49841	49841	Terrabacteria group	Firmicutes	1.95301	36.9	-	AHTA01	113	1905	1810	2/11/13	3/23/17	Contig	Cornell University	SAMN02428979	GCA_000340115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/115/GCA_000340115.1_ASM34011v1	23228887	66-2A
Enterococcus faecalis EnGen0114	1157363	PRJNA88227	88227	Terrabacteria group	Firmicutes	3.31386	37.1	-	AIRE01	22	3504	3336	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808927	GCA_000391445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/445/GCA_000391445.1_Ente_faec_B3053_V1	-	B3053
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.85023	27.1	-	LFQX01	218	3479	3315	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03780001	GCA_001573805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/805/GCA_001573805.1_ASM157380v1	26939550	K3
Francisella noatunensis subsp. orientalis	299583	PRJNA240882	240882	Proteobacteria	Gammaproteobacteria	1.86221	32.3	chromosome:CP011923.2	-	1	1967	1556	6/29/15	8/28/17	Complete Genome	"Aquacen - National Reference Laboratory for Aquatic Animal Diseases, Brazilian Ministry of Fisheries and Aquaculture and Laboratory of Cellular and Molecular Genetics, Federal University of Minas Gerais"	SAMN02666529	GCA_001042565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/565/GCA_001042565.2_ASM104256v2	-	FNO190
Bacillus subtilis	1423	PRJNA266797	266797	Terrabacteria group	Firmicutes	4.18116	43.3	-	JXHR01	33	4460	4228	2/2/15	3/25/17	Scaffold	TIFN	SAMN03174425	GCA_000830645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/645/GCA_000830645.1_ASM83064v1	26988043	B4146
Vibrio parahaemolyticus S139	1394673	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.01484	45.3	-	AWIN01	579	4836	4619	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338987	GCA_000489675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/675/GCA_000489675.1_S139	-	S139
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.05784	37.8	-	MLOG01	725	2127	1800	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297098	GCA_001869015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/015/GCA_001869015.1_ASM186901v1	27118061	AWRIB621
Xanthomonas oryzae pv. oryzicola	129394	PRJNA374501	374501	Proteobacteria	Gammaproteobacteria	4.29205	64.2	-	MVFS01	218	4089	3357	6/9/17	6/12/17	Scaffold	Institut de Recherche pour le Developpement	SAMN06324234	GCA_002189395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/395/GCA_002189395.1_ASM218939v1	-	BAI15
Brucella abortus NI628	1160160	PRJNA173553	173553	Proteobacteria	Alphaproteobacteria	3.28646	57.2	-	AQMT01	6	3377	3154	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811199	GCA_000366665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/665/GCA_000366665.1_Bruc_abor_NI628_V1	-	NI628
Francisella tularensis	263	PRJNA253522	253522	Proteobacteria	Gammaproteobacteria	1.85192	32.3	-	JPPE01	95	1999	1557	2/25/16	4/5/17	Scaffold	Swedish Defence Research Agency	SAMN02870477	GCA_001574475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/475/GCA_001574475.1_ASM157447v1	-	NO-3/2011
Clostridioides difficile DA00145	1151330	PRJNA85835	85835	Terrabacteria group	Firmicutes	4.05107	28.3	-	AVJE01	132	3810	3567	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766646	GCA_000450145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/145/GCA_000450145.2_ASM45014v2	-	DA00145
Vibrio cholerae E306	1398492	PRJNA218507	218507	Proteobacteria	Gammaproteobacteria	4.16507	47.7	-	AWWA01	51	4011	3855	10/29/13	3/24/17	Scaffold	Institute of Microbiology Chinese Academy of Sciences	SAMN02470030	GCA_000487955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/955/GCA_000487955.1_E306v1	24517211	E306
Bacillus thuringiensis	1428	PRJNA312024	312024	Terrabacteria group	Firmicutes	5.74844	35	-	LSNJ01	47	6175	5794	2/25/16	4/5/17	Scaffold	KRIBB	SAMN04492775	GCA_001573165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/165/GCA_001573165.1_KB1_v2_kclc	27103716	KB1
Chlamydia trachomatis	813	PRJEB2281	203906	PVC group	Chlamydiae	5.42783	36.9	-	CSTQ01	5599	4006	3939	3/24/15	6/13/15	Scaffold	SC	SAMEA757089	GCA_001213265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/265/GCA_001213265.1_5833_5_4	-	SwabB4
Burkholderia pseudomallei BDU 2	1434211	PRJNA230745	230745	Proteobacteria	Betaproteobacteria	7.29911	68	-	JPVG01	2	7535	6956	11/11/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02948396	GCA_000774545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/545/GCA_000774545.1_BCW_27	25676747	BDU 2
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.06122	67	-	MUVD01	200	7764	7334	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001963	GCA_001992995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/992/995/GCA_001992995.1_ASM199299v1	-	VC5719
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.48702	50.8	-	FTST01	383	5019	4256	1/28/17	3/2/17	Contig	SC	SAMEA2054226	GCA_900157515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/515/GCA_900157515.1_9789_6_37	-	2090STDY5461751
Legionella pneumophila subsp. pneumophila ATCC 43290	933093	PRJNA341407	341407	Proteobacteria	Gammaproteobacteria	3.33947	38.1	-	MTGE01	26	3051	2962	2/13/17	4/2/17	Contig	California Department of Public Health	SAMN05721780	GCA_001997245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/245/GCA_001997245.1_ASM199724v1	-	ATCC 43290
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.26158	58.5	-	MTZE01	322	6094	5501	4/27/17	5/3/17	Contig	Massey University	SAMN06197088	GCA_002112045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/045/GCA_002112045.1_ASM211204v1	28369338	NZ43
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.22268	41	-	CEGX01	71	2236	2078	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233942	GCA_000937655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/655/GCA_000937655.1_Velvet_assembly	-	LS7L
Streptococcus agalactiae GB00219	1154908	PRJNA86489	86489	Terrabacteria group	Firmicutes	2.06324	35.3	-	ALTC01	25	2131	2033	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991188	GCA_000289555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/555/GCA_000289555.1_ASM28955v1	-	GB00219
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	4.14673	38.9	-	JSCY01	60	4062	3904	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068189	GCA_000804975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/975/GCA_000804975.1_ASM80497v1	25487793	2011BJAB5
Pseudomonas aeruginosa C23	1402573	PRJNA219935	219935	Proteobacteria	Gammaproteobacteria	6.89606	66.1	-	AXOU01	3	6604	6441	10/24/13	3/16/17	Scaffold	Broad Institute	SAMN02360745	GCA_000480495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/495/GCA_000480495.1_Pseu_aeru_3567_V1	-	C23
Shigella flexneri 2002091	1434164	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.42811	50.6	-	AZPQ01	282	4909	4121	1/29/14	3/5/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437399	GCA_000566225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/225/GCA_000566225.1_ASM56622v1	-	2002091
Bacillus anthracis	1392	PRJNA264742	264742	Terrabacteria group	Firmicutes	5.4496	35.1	-	JSZU01	35	6071	5699	11/14/14	3/25/17	Scaffold	Georgia Institute of Technology	SAMN03165119	GCA_000783035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/035/GCA_000783035.1_ASM78303v1	-	2000031709
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.6311	34.9	-	JQOW01	288	4212	3762	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949572	GCA_001567785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/785/GCA_001567785.1_ASM156778v1	26833181	CMCC-3
Streptococcus pyogenes ABC020056060	1439260	PRJNA233089	233089	Terrabacteria group	Firmicutes	1.80129	38.5	-	JJHV01	7	1846	1730	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567438	GCA_000631085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/085/GCA_000631085.1_Stre_pyog_ABC020056060_V1	-	ABC020056060
Neisseria meningitidis NM255	1069610	PRJNA70995	70995	Proteobacteria	Betaproteobacteria	2.19637	51.6	-	ALXO01	29	2551	2126	8/27/12	3/21/17	Contig	Institute for Genome Sciences	SAMN00849781	GCA_000293285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/285/GCA_000293285.1_ASM29328v1	-	NM255
Helicobacter pylori GAM246Ai	1159037	PRJNA89245	89245	Proteobacteria	delta/epsilon subdivisions	1.66441	39.2	-	APDM01	45	1639	1472	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436848	GCA_000345265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/265/GCA_000345265.2_ASM34526v2	-	GAM246Ai
Streptococcus pneumoniae GA13455	760771	PRJNA48699	48699	Terrabacteria group	Firmicutes	2.10842	39.8	-	AGOY01	10	2294	1999	10/25/11	3/8/17	Contig	Institute for Genome Sciences	SAMN00792738	GCA_000232545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/545/GCA_000232545.2_ASM23254v2	-	GA13455
Francisella tularensis subsp. tularensis WY-00W4114	1133671	PRJNA81045	81045	Proteobacteria	Gammaproteobacteria	1.89925	32.3	chromosome:NZ_CP009753.1/CP009753.1	-	1	1920	1643	5/21/15	4/3/17	Complete Genome	University of Nebraska Medical Center	SAMN03266146	GCA_001011135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/135/GCA_001011135.1_ASM101113v1	25918839	WY-00W4114
Mycobacterium tuberculosis PanR0401	1346775	PRJNA208595	208595	Terrabacteria group	Actinobacteria	4.40786	65.2486	chromosome:NZ_CM002067.1/CM002067.1	ATEG01	1	4324	4007	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471071	GCA_000443635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/635/GCA_000443635.1_fedora0401c_IS	23884993	PanR0401
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.93283	38.1	-	FFIU01	26	1972	1817	2/9/16	3/27/17	Scaffold	SC	SAMEA2674707	GCA_900044695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/695/GCA_900044695.1_14412_4_5	-	2842STDY5882033
Mycobacterium avium	1764	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.51805	68.9	-	NSFG01	85	5274	5023	9/12/17	9/14/17	Contig	University of Michigan Medical School	SAMN07528785	GCA_002292585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/585/GCA_002292585.1_ASM229258v1	-	FLAC0155
Bacillus cereus VD133	1053233	PRJNA70433	70433	Terrabacteria group	Firmicutes	6.78691	35.3	-	AHFB01	23	7235	6455	5/16/13	4/10/17	Scaffold	Broad Institute	SAMN02596865	GCA_000399025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/025/GCA_000399025.1_Baci_cere_VD133_V1	-	VD133
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.46206	32	-	JUNT01	164	2400	2313	7/10/15	3/26/17	Contig	University of Washington	SAMN03198133	GCA_001075315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/315/GCA_001075315.1_ASM107531v1	26230489	919_SEPI
Francisella tularensis subsp. tularensis	119856	PRJNA240113	240113	Proteobacteria	Gammaproteobacteria	1.86244	32.3	chromosome:NZ_CP010115.1/CP010115.1	-	1	1894	1602	2/6/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03219196	GCA_000833475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/475/GCA_000833475.1_ASM83347v1	25931589	NIH B-38
Yersinia pestis PY-58	992159	PRJNA64345	64345	Proteobacteria	Gammaproteobacteria	4.60273	47.7	-	AKSS01	832	4495	4148	6/15/12	3/27/17	Contig	Institute for Genome Sciences	SAMN02141480	GCA_000268865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/865/GCA_000268865.2_ASM26886v2	-	PY-58
Campylobacter jejuni subsp. jejuni ICDCCJ07002	1295394	PRJNA189791	189791	Proteobacteria	delta/epsilon subdivisions	1.69841	30.5	-	APNP01	7	1771	1665	4/6/13	3/15/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, and State Key Laboratory for Infectious Disease Prevention and Control, Chinese Center for Disease Control and Prevention"	SAMN02471150	GCA_000355825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/825/GCA_000355825.1_ICDCCJ07002	23704181	ICDCCJ07002
Francisella tularensis subsp. tularensis SCHU S4	177416	PRJNA239340	239340	Proteobacteria	Gammaproteobacteria	1.89279	32.3	chromosome:NZ_CP010290.1/CP010290.1	-	1	1928	1667	2/6/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03246840	GCA_000833535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/535/GCA_000833535.1_ASM83353v1	25931589	SHU-S4
Francisella noatunensis subsp. orientalis LADL--07-285A	1356861	PRJNA210898	210898	Proteobacteria	Gammaproteobacteria	1.85899	32.3	chromosome:NC_023029.1/CP006875.1	-	1	1896	1422	12/11/13	4/2/17	Complete Genome	LSU School of Veterinary Medicine	SAMN02641525	GCA_000505725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/725/GCA_000505725.1_ASM50572v1	-	LADL--07-285A
alpha proteobacterium HIMB59	744985	PRJNA46519	46519	Proteobacteria	Alphaproteobacteria	1.41013	32.3	chromosome:NC_018644.1/CP003801.1	-	1	1526	1481	9/24/12	9/4/17	Complete Genome	Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN00010387	GCA_000299115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/115/GCA_000299115.1_ASM29911v1	-	HIMB59
Francisella tularensis subsp. tularensis TIGB03	1001542	PRJNA64441	64441	Proteobacteria	Gammaproteobacteria	1.96865	32.3	chromosome:NC_016933.1/CP003048.1	-	1	2018	1747	2/23/12	3/30/17	Complete Genome	Virginia Polytechnic Institute and State University	SAMN02604301	GCA_000248415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/415/GCA_000248415.1_ASM24841v1	22535949	TIGB03
Campylobacter jejuni subsp. jejuni ICDCCJ07004	1295400	PRJNA189793	189793	Proteobacteria	delta/epsilon subdivisions	1.69708	30.5	-	APNQ01	57	1770	1657	4/6/13	3/15/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02471149	GCA_000355845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/845/GCA_000355845.1_ICDCCJ07004	26197476	ICDCCJ07004
Yersinia pestis PY-59	992160	PRJNA64347	64347	Proteobacteria	Gammaproteobacteria	4.67669	47.5	-	AKST01	602	4576	4223	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141481	GCA_000268885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/885/GCA_000268885.1_ASM26888v1	-	PY-59
Francisella tularensis subsp. tularensis TI0902	1001534	PRJNA64439	64439	Proteobacteria	Gammaproteobacteria	1.89274	32.3	chromosome:NC_016937.1/CP003049.1	-	1	1925	1664	2/23/12	3/30/17	Complete Genome	Virginia Polytechnic Institute and State University	SAMN02604300	GCA_000248435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/435/GCA_000248435.1_ASM24843v1	22535949	TI0902
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.58854	31.8	-	JUNP01	219	2561	2439	7/10/15	3/26/17	Contig	University of Washington	SAMN03198138	GCA_001075335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/335/GCA_001075335.1_ASM107533v1	26230489	921_SEPI
Bacillus cereus VDM019	1053246	PRJNA70459	70459	Terrabacteria group	Firmicutes	6.00844	35.3	-	AHFO01	11	6272	5830	5/16/13	4/10/17	Scaffold	Broad Institute	SAMN02596878	GCA_000399045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/045/GCA_000399045.1_Baci_cere_VDM019_V1	-	VDM019
Mycobacterium avium	1764	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.17983	69.1	-	NSFH01	100	4925	4694	9/12/17	9/14/17	Contig	University of Michigan Medical School	SAMN07528784	GCA_002292595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/595/GCA_002292595.1_ASM229259v1	-	FLAC0146
Haemophilus influenzae	727	PRJEB4909	240177	Proteobacteria	Gammaproteobacteria	1.81527	38	-	FFIT01	12	1829	1699	2/9/16	3/27/17	Scaffold	SC	SAMEA2674685	GCA_900044735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/735/GCA_900044735.1_14412_3_89	-	2842STDY5882022
Mycobacterium tuberculosis PanR0317	1346776	PRJNA208585	208585	Terrabacteria group	Actinobacteria	4.39245	65.147	chromosome:NZ_CM002068.1/CM002068.1	ATEH01	1	4296	3938	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471083	GCA_000443655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/655/GCA_000443655.1_fedora0317b_IS	23884993	PanR0317
Rickettsia heilongjiangensis 054	1032845	PRJNA66907	66907	Proteobacteria	Alphaproteobacteria	1.27847	32.3	chromosome:NC_015866.1/CP002912.1	-	1	1525	1210	7/22/11	4/17/17	Complete Genome	"Academy of Military Medical Sciences, The Institute of Microbiology and Epidemiology, China"	SAMN02602971	GCA_000221205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/205/GCA_000221205.1_ASM22120v1	21914880	54
Streptococcus pneumoniae GA13637	760773	PRJNA48703	48703	Terrabacteria group	Firmicutes	2.12829	39.9	-	AGPA01	21	2352	2008	10/25/11	3/8/17	Contig	Institute for Genome Sciences	SAMN00792741	GCA_000232585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/585/GCA_000232585.2_ASM23258v2	-	GA13637
Helicobacter pylori GAM249T	1159038	PRJNA89247	89247	Proteobacteria	delta/epsilon subdivisions	1.62366	39.2	-	APDN01	39	1586	1421	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436785	GCA_000345285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/285/GCA_000345285.2_ASM34528v2	-	GAM249T
Neisseria meningitidis NM140	1069611	PRJNA70997	70997	Proteobacteria	Betaproteobacteria	2.16477	51.5	-	ALXP01	31	2542	2124	8/27/12	3/21/17	Contig	Institute for Genome Sciences	SAMN00849779	GCA_000293305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/305/GCA_000293305.1_ASM29330v1	-	NM140
Streptococcus pyogenes ABC020044203	1439135	PRJNA233081	233081	Terrabacteria group	Firmicutes	1.83056	38.6	-	JJHW01	7	1873	1738	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567430	GCA_000631105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/105/GCA_000631105.1_Stre_pyog_ABC020044203_V1	-	ABC020044203
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.7581	35	-	JQPB01	325	4379	3806	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949578	GCA_001567805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/805/GCA_001567805.1_ASM156780v1	26833181	J50
Bacillus anthracis	1392	PRJNA264742	264742	Terrabacteria group	Firmicutes	5.44942	35.1	-	JSZV01	43	6074	5707	11/14/14	3/25/17	Scaffold	Georgia Institute of Technology	SAMN03165120	GCA_000783055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/055/GCA_000783055.1_ASM78305v1	-	2000031765
Shigella flexneri 2002106	1434165	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.45603	50.5	-	AZPR01	295	4929	4126	1/29/14	3/5/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437400	GCA_000566245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/245/GCA_000566245.1_ASM56624v1	-	2002106
Pseudomonas aeruginosa C20	1402572	PRJNA219934	219934	Proteobacteria	Gammaproteobacteria	6.9295	66	-	AXOV01	3	6604	6449	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360744	GCA_000480515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/515/GCA_000480515.1_Pseu_aeru_3566_V1	-	C20
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	4.05928	38.9	-	JSCZ01	73	3979	3804	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068192	GCA_000804985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/985/GCA_000804985.1_ASM80498v1	25487793	2011BJAB8
Streptococcus agalactiae GB00300	1154915	PRJNA86503	86503	Terrabacteria group	Firmicutes	2.17102	35.4	-	ALTJ01	37	2271	2123	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991182	GCA_000289575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/575/GCA_000289575.1_ASM28957v1	-	GB00300
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.46722	41.3	-	CEHX01	285	2411	2221	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233959	GCA_000937695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/695/GCA_000937695.1_Velvet_assembly	-	LS9N
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.76232	58.3	-	MTZF01	2	6496	5845	4/27/17	5/3/17	Contig	Massey University	SAMN06197089	GCA_002112065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/065/GCA_002112065.1_ASM211206v1	28369338	NZ45
Legionella pneumophila subsp. pneumophila str. Mississauga	1206778	PRJNA170014	170014	Proteobacteria	Gammaproteobacteria	3.38434	38.2	-	ANNP01	37	3085	2953	2/16/17	3/29/17	Contig	Public Health Ontario	SAMN06341125	GCA_002002625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/625/GCA_002002625.1_ASM200262v1	-	Mississauga
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.53664	50.8	-	FTTN01	370	5100	4318	1/28/17	2/26/17	Contig	SC	SAMEA2054156	GCA_900157605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/605/GCA_900157605.1_9789_6_22	-	2090STDY5461736
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.07496	66.9	-	MUVF01	195	7824	7397	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001965	GCA_001993005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/005/GCA_001993005.1_ASM199300v1	-	VC7393
Burkholderia pseudomallei MSHR4012	1435367	PRJNA231190	231190	Proteobacteria	Betaproteobacteria	7.22928	68.1	-	JPVH01	5	7425	6849	11/11/14	4/10/17	Scaffold	Los Alamos National Laboratory	SAMN02948397	GCA_000774555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/555/GCA_000774555.1_BCW_8	25676747	MSHR4012
Chlamydia trachomatis	813	PRJEB2214	203957	PVC group	Chlamydiae	7.15869	40.5	-	CTBL01	4709	5608	5453	3/24/15	6/13/15	Scaffold	SC	SAMEA1527875	GCA_001217505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/505/GCA_001217505.1_6406_4_20	-	SwabB1
Bacillus thuringiensis	1428	PRJNA293263	293263	Terrabacteria group	Firmicutes	5.77639	34.9	-	LILG01	46	6133	5759	6/28/16	4/5/17	Scaffold	State Key Laboratory of Agricultural Microbiology	SAMN04000100	GCA_001677055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/055/GCA_001677055.1_ASM167705v1	27486447	BGSC 4BT1
Vibrio cholerae O1 str. PCS-022	1095638	PRJNA76211	76211	Proteobacteria	Gammaproteobacteria	4.05538	47.5	-	JDTE01	105	3897	3723	2/14/14	3/27/17	Scaffold	Institute for Genome Sciences	SAMN00991860	GCA_000569115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/115/GCA_000569115.2_ASM56911v2	-	PCS-022
Clostridioides difficile DA00149	1151331	PRJNA85837	85837	Terrabacteria group	Firmicutes	3.7143	28.2	-	AVJF01	95	3400	3215	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766647	GCA_000450165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/165/GCA_000450165.2_ASM45016v2	-	DA00149
Francisella tularensis	263	PRJNA253522	253522	Proteobacteria	Gammaproteobacteria	1.86692	32.3	-	JPPD01	97	2013	1553	2/25/16	4/5/17	Scaffold	Swedish Defence Research Agency	SAMN02870475	GCA_001574485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/485/GCA_001574485.1_ASM157448v1	-	NO-1/2011
Brucella abortus NI593	1160171	PRJNA173565	173565	Proteobacteria	Alphaproteobacteria	3.28585	57.2	-	AQMQ01	3	3377	3156	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811196	GCA_000366685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/685/GCA_000366685.1_Bruc_abor_NI593_V1	-	NI593
Xanthomonas oryzae pv. oryzicola	129394	PRJNA374504	374504	Proteobacteria	Gammaproteobacteria	4.47469	64.1	-	MVFT01	207	4251	3509	6/9/17	6/12/17	Scaffold	Institut de Recherche pour le Developpement	SAMN06324247	GCA_002189435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/435/GCA_002189435.1_ASM218943v1	-	BAI20
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.05149	38	-	MLOI01	722	2183	1808	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297100	GCA_001869045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/045/GCA_001869045.1_ASM186904v1	27118061	AWRIB629
Vibrio parahaemolyticus S138	1394672	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.13365	45.1	-	AWIO01	500	4887	4680	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338986	GCA_000489695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/695/GCA_000489695.1_S138	-	S138
Bacillus subtilis	1423	PRJNA266797	266797	Terrabacteria group	Firmicutes	4.19962	43.4	-	JXHM01	135	4499	4215	2/2/15	3/25/17	Scaffold	TIFN	SAMN03174420	GCA_000830675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/675/GCA_000830675.1_ASM83067v1	26988043	B4070
Methanotorris igneus Kol 5	880724	PRJNA51821	51821	Euryarchaeota	Methanococci	1.8542	32.3	chromosome:NC_015562.1/CP002737.1	-	1	1845	1751	5/23/11	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN00713627	GCA_000214415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/415/GCA_000214415.1_ASM21441v1	-	Kol 5
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.86944	28	-	LFPL01	84	3673	3497	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779961	GCA_001573825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/825/GCA_001573825.1_ASM157382v1	26939550	Mauritius
Enterococcus faecalis EnGen0100	1157364	PRJNA88229	88229	Terrabacteria group	Firmicutes	3.31711	37.1	-	AIRG01	22	3500	3329	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808928	GCA_000391465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/465/GCA_000391465.1_Ente_faec_B3126_V1	-	B3126
Streptococcus mutans SM4	857109	PRJNA49845	49845	Terrabacteria group	Firmicutes	1.97758	36.9	-	AHTC01	152	1954	1860	2/11/13	3/23/17	Contig	Cornell University	SAMN02428980	GCA_000340135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/135/GCA_000340135.1_ASM34013v1	23228887	SM4
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14871	52.4	-	CQHZ01	77	2527	2194	3/23/15	4/11/17	Contig	SC	SAMEA1690357	GCA_001130425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/425/GCA_001130425.1_8289_2_65	-	GCGS065
Enterococcus faecium EnGen0051	1138931	PRJNA82513	82513	Terrabacteria group	Firmicutes	2.96377	38.1	-	AHYG01	21	3019	2812	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779847	GCA_000322365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/365/GCA_000322365.1_Ente_faec_E1644_V1	-	E1644
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.09792	41.3	-	CVYO01	68	2037	1850	6/24/15	3/26/17	Contig	SC	SAMEA1032919	GCA_001177665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/665/GCA_001177665.1_6830_4_89	-	EQUI0234
Brucella melitensis	29459	PRJNA380526	380526	Proteobacteria	Alphaproteobacteria	3.28813	57.2	-	NGAC01	37	3353	3117	8/9/17	8/12/17	Contig	Institute for Medical Research	SAMN06909304	GCA_002245235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/235/GCA_002245235.1_ASM224523v1	28774972	VRI 4799/15
Francisella cf. tularensis subsp. novicida 3523	676032	PRJNA62753	62753	Proteobacteria	Gammaproteobacteria	1.94531	32.3	chromosome:NC_017449.1/CP002558.1	-	1	1879	1797	4/8/11	3/30/17	Complete Genome	LANL	SAMN02603514	GCA_000195555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/555/GCA_000195555.1_ASM19555v1	-	3523
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.44837	53.5	-	LSVV01	46	2356	2189	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496965	GCA_002203375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/375/GCA_002203375.1_S39	-	1052
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.74758	47.2	-	CTKL01	36	4432	4261	3/26/15	3/26/17	Scaffold	SC	SAMEA980157	GCA_001220145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/145/GCA_001220145.1_5116_2_8	-	YE38/03
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.15655	59.9	-	FCIW01	17	4953	4788	1/21/16	3/27/17	Scaffold	SC	SAMEA2273979	GCA_001536725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/725/GCA_001536725.1_12082_3_14	-	2880STDY5682906
Lactobacillus plantarum	1590	PRJNA283610	283610	Terrabacteria group	Firmicutes	3.23552	44.4	-	LEBJ01	92	3160	2967	12/3/16	3/28/17	Contig	"Faculty of Agro-industry, Prince of Songkla University, wageningen university"	SAMN03654484	GCA_001888415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/415/GCA_001888415.1_ASM188841v1	-	P86
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.73593	31.3	-	LBDR01	26	1798	1695	10/27/15	3/18/17	Contig	FDA	SAMN03344573	GCA_001416935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/935/GCA_001416935.1_ASM141693v1	-	CVM N48647F
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.49785	32.6	-	CUGX01	94	2489	2360	3/31/15	4/21/17	Scaffold	SC	SAMEA1035136	GCA_001235325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/325/GCA_001235325.1_7068_7_54	-	123477
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.94706	55.1	-	JYMC01	104	4910	4647	3/13/15	3/25/17	Scaffold	University of Minnesota	SAMN03333153	GCA_000952355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/355/GCA_000952355.1_ASM95235v1	26438492	MNCRE48
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.46854	56.8	-	NCTR01	30	4329	4128	4/20/17	4/22/17	Scaffold	FDA/CFSAN	SAMN06697625	GCA_002101435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/435/GCA_002101435.1_ASM210143v1	-	MOD1_GK794
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15545	64.1	-	FVBP01	21	5173	5028	3/10/17	3/18/17	Contig	SC	SAMEA2071282	GCA_900130495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/495/GCA_900130495.1_10665_3_2	-	172
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.29916	64.3	-	DFVR01	17	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454004	GCA_002380045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/045/GCA_002380045.1_ASM238004v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.60924	67.1	-	LPEK01	118	6869	6479	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449458	GCA_001529225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/225/GCA_001529225.1_ASM152922v1	-	MSMB1221WGS
Acinetobacter pittii	48296	PRJNA310419	310419	Proteobacteria	Gammaproteobacteria	3.79175	38.8	-	LSAK01	46	3680	3536	8/29/16	4/5/17	Scaffold	The First Affiliated Hospital of Zhejiang Chinese Medical University	SAMN04452412	GCA_001716935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/935/GCA_001716935.1_ASM171693v1	-	TCM292
Enterobacter hormaechei subsp. hormaechei	301105	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.59745	55.3	-	LEEI01	36	4459	4257	6/9/15	3/26/17	Contig	JCVI	SAMN03732694	GCA_001023315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/315/GCA_001023315.1_ASM102331v1	-	GN02315
Pseudomonas sp. G5(2012)	1268068	PRJNA183186	183186	Proteobacteria	Gammaproteobacteria	7.20456	59.3	-	APIO01	223	6699	6491	6/5/13	4/8/17	Contig	Gwangju Institution of Science and Technology	SAMN02469864	GCA_000408945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/945/GCA_000408945.1_ASM40894v1	-	G5
Streptomyces sp. NRRL F-525	1463861	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.9433	70.2	-	JNXE01	242	9721	9417	7/1/14	3/9/17	Contig	University of Illinois	SAMN02645279	GCA_000716605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/605/GCA_000716605.1_ASM71660v1	-	NRRL F-525
Bacillus sp. TD42	380264	PRJNA325897	325897	Terrabacteria group	Firmicutes	5.85933	35.2	-	MACH01	170	6253	5763	11/18/16	4/17/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05231663	GCA_001884065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/065/GCA_001884065.1_ASM188406v1	-	TD42
Acinetobacter sp. 51m	1856846	PRJNA324372	324372	Proteobacteria	Gammaproteobacteria	3.38715	42.8	-	LZDF01	199	3347	2878	9/2/16	4/21/17	Contig	Institute of Experimental Medicine	SAMN05201307	GCA_001720685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/685/GCA_001720685.1_ASM172068v1	-	51m
Clostridium sp. CAG:265	1262787	PRJEB797	206742	Terrabacteria group	Firmicutes	2.51878	28.9	-	CBEC01	69	2352	2326	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138713	GCA_000436575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/575/GCA_000436575.1_MGS265	-	-
Enterobacter sp. 56-7	1895906	PRJNA279279	279279	Proteobacteria	Gammaproteobacteria	5.01308	55.7	-	MKVD01	139	4880	4641	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660598	GCA_001898735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/898/735/GCA_001898735.1_ASM189873v1	-	-
Staphylococcus sp. HMSC074C12	1715011	PRJNA296522	296522	Terrabacteria group	Firmicutes	2.47324	32.7	-	LTON01	91	2425	2339	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498672	GCA_001837805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/805/GCA_001837805.1_ASM183780v1	-	HMSC074C12
Streptococcus sp. 263_SSPC	1579343	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.80435	39.2	-	JVNU01	60	1814	1727	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197456	GCA_001071995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/995/GCA_001071995.1_ASM107199v1	26230489	263_SSPC
Prevotella sp. UBA2732	1947099	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.85914	53.1	-	DEKC01	186	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06452049	GCA_002353675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/675/GCA_002353675.1_ASM235367v1	28894102	-
Mycobacterium sp. E2462	1834133	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.12073	69.8	-	LZKC01	485	4984	4447	6/17/16	4/13/17	Contig	JCVI	SAMN04634252	GCA_001672685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/685/GCA_001672685.1_ASM167268v1	-	E2462
Prochlorococcus sp. REDSEA-S22_B1	1811563	PRJNA289734	289734	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.01039	31.1	-	LUPT01	113	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534621	GCA_001627445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/445/GCA_001627445.1_ASM162744v1	27377622	-
Prochlorococcus sp. REDSEA-S28_B1	1811565	PRJNA289734	289734	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.926852	31.3	-	LUPV01	101	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534623	GCA_001627475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/475/GCA_001627475.1_ASM162747v1	27377622	-
Mycobacterium sp. E1386	1834126	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.64774	67.8	-	LZKH01	263	5469	5091	6/17/16	4/13/17	Contig	JCVI	SAMN04634247	GCA_001672745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/745/GCA_001672745.1_ASM167274v1	-	E1386
Prevotella sp. UBA2737	1947101	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.08216	49	-	DEJX01	69	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06452044	GCA_002353695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/695/GCA_002353695.1_ASM235369v1	28894102	-
Streptococcus sp. 400_SSPC	1579341	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.94664	42.2	-	JVIQ01	77	1916	1834	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197590	GCA_001072745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/745/GCA_001072745.1_ASM107274v1	26230489	400_SSPC
Staphylococcus sp. HMSC074D07	1715029	PRJNA296156	296156	Terrabacteria group	Firmicutes	2.40359	32.1	-	LTOM01	91	2397	2270	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498570	GCA_001837825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/825/GCA_001837825.1_ASM183782v1	-	HMSC074D07
Clostridium sp. CAG:253	1262785	PRJEB789	206575	Terrabacteria group	Firmicutes	2.88907	35.9	-	CBEI01	104	2567	2539	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138722	GCA_000436755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/755/GCA_000436755.1_MGS253	-	-
Acinetobacter sp. YK3	1860097	PRJNA324744	324744	Proteobacteria	Gammaproteobacteria	3.76538	41.4	-	LZPJ01	150	3538	3416	9/16/16	4/6/17	Contig	"Australian Centre for Ecogenomics, The University of Queensland"	SAMN05213934	GCA_001729365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/365/GCA_001729365.1_ASM172936v1	-	YK3
Bacillus sp. TD41	380263	PRJNA325892	325892	Terrabacteria group	Firmicutes	5.09442	35.5	-	MACI01	99	5410	5144	11/18/16	4/17/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05231662	GCA_001884105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/105/GCA_001884105.1_ASM188410v1	-	TD41
Streptomyces sp. NRRL F-6674	1463877	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.22019	72.3	-	JNXF01	408	7208	6786	7/1/14	3/14/17	Contig	University of Illinois	SAMN02645280	GCA_000716615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/615/GCA_000716615.1_ASM71661v1	-	NRRL F-6674
Pseudomonas sp. CF149	911239	PRJNA59591	59591	Proteobacteria	Gammaproteobacteria	5.15432	57.5	-	ATLR01	50	4749	4620	6/27/13	4/17/17	Contig	Boise State University	SAMN02469405	GCA_000416155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/155/GCA_000416155.1_ASM41615v1	-	CF149
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.96757	55.3	-	LEEH01	61	4894	4649	6/9/15	3/26/17	Contig	JCVI	SAMN03732695	GCA_001023345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/345/GCA_001023345.1_ASM102334v1	-	GN02320
Acinetobacter pittii	48296	PRJNA310419	310419	Proteobacteria	Gammaproteobacteria	3.78956	38.6	-	LSAM01	43	3646	3498	8/29/16	4/5/17	Scaffold	The First Affiliated Hospital of Zhejiang Chinese Medical University	SAMN04452413	GCA_001716945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/945/GCA_001716945.1_ASM171694v1	-	TCM178
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.58663	67.3	-	LPEJ01	108	6965	6574	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449457	GCA_001529235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/235/GCA_001529235.1_ASM152923v1	-	MSMB1220WGS
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.50509	64.3	-	DFVM01	27	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451755	GCA_002380585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/585/GCA_002380585.1_ASM238058v1	28894102	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.26059	64.1	-	FRYP01	36	5296	5126	12/14/16	3/21/17	Contig	SC	SAMEA2070426	GCA_900130505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/505/GCA_900130505.1_10665_3_3	-	173
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.71138	56	-	NCTU01	271	4595	4340	4/20/17	4/22/17	Scaffold	FDA/CFSAN	SAMN06697621	GCA_002101445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/445/GCA_002101445.1_ASM210144v1	-	MOD1_Comp15
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.65945	55.1	-	JYME01	56	4484	4308	3/13/15	3/25/17	Scaffold	University of Minnesota	SAMN03333155	GCA_000952375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/375/GCA_000952375.1_ASM95237v1	26438492	MNCRE12
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.59464	32.6	-	CUFP01	65	2588	2446	3/31/15	4/21/17	Scaffold	SC	SAMEA1035142	GCA_001235445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/445/GCA_001235445.1_7068_7_25	-	21116
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.70451	31.4	-	LBDQ01	144	1785	1651	10/27/15	3/18/17	Contig	FDA	SAMN03344574	GCA_001416945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/945/GCA_001416945.1_ASM141694v1	-	CVM N49369F
Lactobacillus plantarum	1590	PRJNA283610	283610	Terrabacteria group	Firmicutes	3.30932	44.4	-	LEBL01	57	3233	3074	12/3/16	3/28/17	Contig	"Faculty of Agro-industry, Prince of Songkla University, wageningen university"	SAMN03654355	GCA_001888425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/425/GCA_001888425.1_ASM188842v1	-	P73
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.35554	59.9	-	FCLP01	27	5123	4952	1/21/16	3/27/17	Scaffold	SC	SAMEA2274064	GCA_001536745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/745/GCA_001536745.1_12082_3_86	-	2880STDY5682992
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.45483	46.9	-	CTJI01	114	4174	3935	3/26/15	3/26/17	Scaffold	SC	SAMEA980140	GCA_001220185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/185/GCA_001220185.1_4976_1_11	-	YE58/03
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.41826	53.5	-	LSWB01	46	2324	2156	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496973	GCA_002203395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/395/GCA_002203395.1_S47	-	2278a
Francisella tularensis subsp. tularensis NE061598	510831	PRJNA38289	38289	Proteobacteria	Gammaproteobacteria	1.89268	32.3	chromosome:NC_017453.1/CP001633.1	-	1	1925	1662	12/28/09	3/30/17	Complete Genome	University of Nebraska	SAMN02604230	GCA_000023305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/305/GCA_000023305.1_ASM2330v1	20140244	NE061598
Brucella melitensis	29459	PRJNA344436	344436	Proteobacteria	Alphaproteobacteria	3.28219	57.3	-	NGJQ01	41	3342	3021	8/23/17	8/25/17	Contig	Stavropol Plague Control Reseach Institute	SAMN05823553	GCA_002266745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/745/GCA_002266745.1_ASM226674v1	-	KIV-L
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.14405	41.2	-	CWCK01	82	2096	1912	6/24/15	3/26/17	Contig	SC	SAMEA1032920	GCA_001177685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/685/GCA_001177685.1_6903_5_89	-	EQUI0138
Enterococcus faecium EnGen0050	1138932	PRJNA82515	82515	Terrabacteria group	Firmicutes	3.0013	38.1	-	AHYH01	21	3054	2861	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779848	GCA_000322385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/385/GCA_000322385.1_Ente_faec_E2369_V1	-	E2369
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.146	52.4	-	CQKC01	77	2517	2193	3/22/15	4/11/17	Contig	SC	SAMEA1690424	GCA_001130865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/865/GCA_001130865.1_8289_2_81	-	GCGS081
Streptococcus mutans 24	857107	PRJNA49849	49849	Terrabacteria group	Firmicutes	2.01368	36.7	-	AHTE01	119	1999	1897	2/11/13	3/23/17	Contig	Cornell University	SAMN02428934	GCA_000340155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/155/GCA_000340155.1_ASM34015v1	23228887	24
Enterococcus faecalis EnGen0107	1157365	PRJNA88231	88231	Terrabacteria group	Firmicutes	3.24374	37.1	-	AIRY01	26	3412	3261	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808929	GCA_000391485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/485/GCA_000391485.1_Ente_faec_B594_V1	-	B594
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	4.28574	27.9	-	LFPN01	85	4219	4003	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779962	GCA_001573885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/885/GCA_001573885.1_ASM157388v1	26939550	SU1937
Francisella tularensis subsp. mediasiatica FSC147	441952	PRJNA19571	19571	Proteobacteria	Gammaproteobacteria	1.89389	32.3	chromosome:NC_010677.1/CP000915.1	-	1	1930	1527	5/7/08	4/10/17	Complete Genome	DOE Joint Genome Institute	SAMN02604345	GCA_000018925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/925/GCA_000018925.1_ASM1892v1	19521508	FSC147; GIEM 543
Bacillus subtilis	1423	PRJNA266797	266797	Terrabacteria group	Firmicutes	4.12821	43.2	-	JXHN01	74	4412	4149	2/2/15	3/25/17	Scaffold	TIFN	SAMN03174421	GCA_000830695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/695/GCA_000830695.1_ASM83069v1	26988043	B4071
Vibrio parahaemolyticus S137	1394671	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.01562	45.3	-	AWIP01	708	4925	4494	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338985	GCA_000489715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/715/GCA_000489715.1_S137	-	S137
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.05407	37.8	-	MLOM01	644	2171	1811	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297104	GCA_001869055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/055/GCA_001869055.1_ASM186905v1	27118061	AWRIB670
Xanthomonas oryzae pv. oryzicola	129394	PRJNA374505	374505	Proteobacteria	Gammaproteobacteria	4.26219	64.2	-	MVFU01	201	4103	3392	6/9/17	6/12/17	Scaffold	Institut de Recherche pour le Developpement	SAMN06324249	GCA_002189465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/465/GCA_002189465.1_ASM218946v1	-	BAI21
Brucella abortus NI639	1160175	PRJNA173569	173569	Proteobacteria	Alphaproteobacteria	3.28621	57.2	-	AQMV01	4	3377	3154	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811201	GCA_000366705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/705/GCA_000366705.1_Bruc_abor_NI639_V1	-	NI639
Francisella tularensis	263	PRJNA253522	253522	Proteobacteria	Gammaproteobacteria	1.85634	32.3	-	JPPG01	96	2023	1566	2/25/16	4/4/17	Scaffold	Swedish Defence Research Agency	SAMN02870482	GCA_001574555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/555/GCA_001574555.1_ASM157455v1	-	NO-8/2011
Clostridioides difficile DA00154	1151332	PRJNA85839	85839	Terrabacteria group	Firmicutes	4.12666	28.7	-	AVJG01	102	3809	3658	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766648	GCA_000450185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/185/GCA_000450185.2_ASM45018v2	-	DA00154
Vibrio cholerae ATCC 14035	1408478	PRJNA223104	223104	Proteobacteria	Gammaproteobacteria	4.02452	47.5	-	JHXR01	62	3903	3688	4/8/14	3/24/17	Scaffold	DOE Joint Genome Institute	SAMN02744003	GCA_000621645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/621/645/GCA_000621645.1_ASM62164v1	-	ATCC 14035
Bacillus thuringiensis serovar aizawai	1433	PRJNA352636	352636	Terrabacteria group	Firmicutes	6.43827	34.7	-	MOXQ01	214	6953	6329	11/17/16	4/5/17	Scaffold	Korea Research Institute of Bioscience and Biotechnology (KRIBB)	SAMN05990350	GCA_001880115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/115/GCA_001880115.1_ASM188011v1	-	HD-133
Chlamydia trachomatis	813	PRJEB2035	203744	PVC group	Chlamydiae	1.52869	36.9	-	CVNB01	128	1723	1658	4/21/15	6/13/15	Scaffold	SC	SAMEA1008224	GCA_001317725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/725/GCA_001317725.1_7054_3_86	-	LGV98
Burkholderia pseudomallei MSHR4375	1434199	PRJNA230730	230730	Proteobacteria	Betaproteobacteria	7.2988	68.1	-	JPVI01	2	7547	6976	11/11/14	4/10/17	Scaffold	Los Alamos National Laboratory	SAMN02948404	GCA_000774565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/565/GCA_000774565.1_BCW_16	25676747	MSHR4375
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.10311	67	-	MUVG01	182	7843	7378	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001966	GCA_001993035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/035/GCA_001993035.1_ASM199303v1	-	VC7925
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.53739	50.8	-	FTSO01	379	5101	4323	1/28/17	2/26/17	Contig	SC	SAMEA2054163	GCA_900157615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/615/GCA_900157615.1_9789_6_29	-	2090STDY5461743
Legionella pneumophila subsp. pneumophila str. Sudbury	1206779	PRJNA170020	170020	Proteobacteria	Gammaproteobacteria	3.35193	38.2	-	ANNQ01	29	3052	2967	2/16/17	3/29/17	Contig	Public Health Ontario	SAMN06341126	GCA_002002645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/645/GCA_002002645.1_ASM200264v1	-	Sudbury
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.31051	58.4	-	MTZH01	320	6127	5546	4/27/17	5/3/17	Contig	Massey University	SAMN06197092	GCA_002112095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/095/GCA_002112095.1_ASM211209v1	28369338	NZ48
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	1.99727	41.3	-	CEJB01	65	1991	1902	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233993	GCA_000937735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/735/GCA_000937735.1_Velvet_assembly	-	type strain: S12
Streptococcus agalactiae GB00867	1154933	PRJNA86539	86539	Terrabacteria group	Firmicutes	2.04019	35.2	-	ALUB01	23	2088	1977	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991431	GCA_000289595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/595/GCA_000289595.1_ASM28959v1	-	GB00867
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	4.14006	38.9	-	JSDB01	85	3996	3831	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068195	GCA_000805035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/035/GCA_000805035.1_ASM80503v1	25487793	1999BJAB11
Pseudomonas aeruginosa M9A.1	1402571	PRJNA219933	219933	Proteobacteria	Gammaproteobacteria	6.42596	66.3	-	AXOW01	10	6079	5909	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360743	GCA_000480535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/535/GCA_000480535.1_Pseu_aeru_3098_V1	-	M9A.1
Shigella flexneri 2002110	1434166	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.42891	50.5	-	AZPS01	302	4929	4093	1/29/14	3/5/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437401	GCA_000566265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/265/GCA_000566265.1_ASM56626v1	-	2002110
Bacillus anthracis	1392	PRJNA264742	264742	Terrabacteria group	Firmicutes	5.45031	35.1	-	JSZW01	45	6078	5706	11/14/14	3/25/17	Scaffold	Georgia Institute of Technology	SAMN03165121	GCA_000783075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/075/GCA_000783075.1_ASM78307v1	-	2000032819
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.88843	35.3	-	JQPC01	137	4650	4102	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947765	GCA_001567815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/815/GCA_001567815.1_ASM156781v1	26833181	20046
Streptococcus pyogenes ABC020057449	1439287	PRJNA233079	233079	Terrabacteria group	Firmicutes	1.80778	38.5	-	JJHX01	6	1858	1734	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567428	GCA_000631125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/125/GCA_000631125.1_Stre_pyog_ABC020057449_V1	-	ABC020057449
Neisseria meningitidis NM183	1069612	PRJNA70999	70999	Proteobacteria	Betaproteobacteria	2.18909	51.5	-	ALXQ01	27	2550	2119	8/27/12	3/21/17	Contig	Institute for Genome Sciences	SAMN00849780	GCA_000293325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/325/GCA_000293325.1_ASM29332v1	-	NM183
Helicobacter pylori GAM250AFi	1159039	PRJNA89249	89249	Proteobacteria	delta/epsilon subdivisions	1.57947	39.4	-	APDO01	45	1560	1412	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436918	GCA_000345305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/305/GCA_000345305.2_ASM34530v2	-	GAM250AFi
Streptococcus pneumoniae GA13856	760775	PRJNA48707	48707	Terrabacteria group	Firmicutes	2.04649	39.8	-	AGPB01	10	2230	1963	10/25/11	3/8/17	Contig	Institute for Genome Sciences	SAMN00792744	GCA_000232605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/605/GCA_000232605.2_ASM23260v2	-	GA13856
Rickettsia akari str. Hartford	293614	PRJNA12953	12953	Proteobacteria	Alphaproteobacteria	1.23106	32.3	chromosome:NC_009881.1/CP000847.1	-	1	1355	1012	10/2/07	6/19/17	Complete Genome	Univ. Iowa	SAMN02604084	GCA_000018205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/205/GCA_000018205.1_ASM1820v1	-	Hartford
Mycobacterium tuberculosis PanR0316	1346777	PRJNA208584	208584	Terrabacteria group	Actinobacteria	4.394	65.4997	chromosome:NZ_CM002069.1/CM002069.1	ATEI01	1	4300	4090	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471066	GCA_000443675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/675/GCA_000443675.1_fedora0316c_IS	23884993	PanR0316
Francisella tularensis subsp. tularensis WY96-3418	418136	PRJNA18459	18459	Proteobacteria	Gammaproteobacteria	1.89848	32.3	chromosome:NC_009257.1/CP000608.1	-	1	1919	1647	3/24/07	3/30/17	Complete Genome	BioHealthBase	SAMN02603036	GCA_000016105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/105/GCA_000016105.1_ASM1610v1	17895988	WY96-3418
Mycobacterium avium	1764	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.26523	69	-	NSFJ01	92	5015	4761	9/12/17	9/14/17	Contig	University of Michigan Medical School	SAMN07528781	GCA_002292635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/635/GCA_002292635.1_ASM229263v1	-	FLAC0117
Bacillus cereus BAG1X2-1	1053173	PRJNA70311	70311	Terrabacteria group	Firmicutes	6.53486	34.6	-	AHCT01	13	6882	6404	5/16/13	4/10/17	Scaffold	Broad Institute	SAMN02596805	GCA_000399065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/065/GCA_000399065.1_Baci_cere_BAG1X2-1_G13156_V1	-	BAG1X2-1
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.49402	32.1	-	JUMY01	131	2430	2344	7/10/15	3/26/17	Contig	University of Washington	SAMN03198154	GCA_001075405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/405/GCA_001075405.1_ASM107540v1	26230489	935_SEPI
Francisella tularensis subsp. tularensis FSC198	393115	PRJNA17375	17375	Proteobacteria	Gammaproteobacteria	1.89262	32.3	chromosome:NC_008245.1/AM286280.1	-	1	1927	1665	7/12/06	3/29/17	Complete Genome	University of Birmingham	SAMEA3138200	GCA_000009325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/325/GCA_000009325.1_ASM932v1	-	FSC 198
Yersinia pestis PY-60	992161	PRJNA64349	64349	Proteobacteria	Gammaproteobacteria	4.64808	47.5	-	AKSU01	521	4553	4203	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141482	GCA_000268905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/905/GCA_000268905.1_ASM26890v1	-	PY-60
Campylobacter jejuni subsp. jejuni HN-CJD07035	1310163	PRJNA194379	194379	Proteobacteria	delta/epsilon subdivisions	1.65387	30.5	-	ARYE01	5	1709	1602	7/17/13	3/15/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China"	SAMN02470630	GCA_000438865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/865/GCA_000438865.1_HN-CJD07035	26197476	HN-CJD07035
Francisella tularensis subsp. tularensis SCHU S4	177416	PRJNA9	9	Proteobacteria	Gammaproteobacteria	1.89278	32.3	chromosome:NC_006570.2/AJ749949.2	-	1	1834	1556	12/14/04	8/3/16	Complete Genome	Swedish Defence Research Agency	SAMEA3138185	GCA_000008985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/985/GCA_000008985.1_ASM898v1	15640799	SCHU S4
Francisella tularensis subsp. tularensis str. SCHU S4 substr. NR-28534	1341656	PRJNA270247	270247	Proteobacteria	Gammaproteobacteria	1.88843	32.2983	chromosome:NZ_CP010446.2/CP010446.2; plasmid unnamed:NZ_CP010447.1/CP010447.1	-	2	1928	1616	4/22/15	4/3/17	Complete Genome	Lovelace Respiratory Research Institute	SAMN03264783	GCA_000978785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/978/785/GCA_000978785.2_ASM97878v2	-	SCHU S4 substr. NR-28534
Staphylococcus epidermidis	1282	PRJNA377759	377759	Terrabacteria group	Firmicutes	2.47007	32.2718	chromosome:NZ_CP020463.1/CP020463.1; plasmid p1457:NZ_CP020462.1/CP020462.1	-	2	2423	2276	4/11/17	4/13/17	Complete Genome	Walter Reed Army Institute of Research	SAMN02640609	GCA_002085695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/695/GCA_002085695.1_ASM208569v1	-	1457
Rickettsia rhipicephali	33992	PRJNA301161	301161	Proteobacteria	Alphaproteobacteria	1.44863	32.2645	chromosome:NZ_CP013133.1/CP013133.1; plasmid pHJ51:NZ_CP013134.1/CP013134.1; plasmid pHJ52:NZ_CP013135.1/CP013135.1	-	3	1667	1244	11/10/15	4/11/17	Complete Genome	University of Minnesota	SAMN04240637	GCA_001442475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/475/GCA_001442475.1_ASM144247v1	-	HJ#5
Campylobacter jejuni BJ-CJD101	1310162	PRJNA194378	194378	Proteobacteria	delta/epsilon subdivisions	1.61602	30.5	-	ARWV01	9	1677	1577	7/25/13	3/15/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China."	SAMN02470629	GCA_000440015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/015/GCA_000440015.1_BJ-CJD101	-	BJ-CJD101
Yersinia pestis PY-63	992163	PRJNA64353	64353	Proteobacteria	Gammaproteobacteria	4.68047	47.5	-	AKSW01	524	4534	4214	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141484	GCA_000268925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/925/GCA_000268925.1_ASM26892v1	-	PY-63
Listeria monocytogenes serotype 7 str. SLCC2482	863767	PRJEA50371	50371	Terrabacteria group	Firmicutes	2.98679	37.9581	chromosome NC_018591.1:NC_018591.1/FR720325.1; plasmid pLM7UG1:NC_018888.1/FR667690.1	-	2	3021	2870	9/10/12	2/26/17	Chromosome	ERA-NET / Spatelis	SAMEA2272162	GCA_000210795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/795/GCA_000210795.2_ASM21079v2	23339658	SLCC2482
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.51776	31.9	-	JUKL01	110	2464	2371	7/10/15	3/26/17	Contig	University of Washington	SAMN03198219	GCA_001075555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/555/GCA_001075555.1_ASM107555v1	26230489	997_SHAE
Bacillus cereus BAG1X2-2	1053174	PRJNA70313	70313	Terrabacteria group	Firmicutes	6.85877	34.9	-	AHCU01	15	7225	6732	5/16/13	3/24/17	Scaffold	Broad Institute	SAMN02596806	GCA_000399085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/085/GCA_000399085.1_Baci_cere_BAG1X2-2_V1	-	BAG1X2-2
Mycobacterium avium	1764	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.35711	69	-	NSFM01	83	5109	4870	9/12/17	9/14/17	Contig	University of Michigan Medical School	SAMN07528777	GCA_002292655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/655/GCA_002292655.1_ASM229265v1	-	FLAC0059
Methanocaldococcus fervens AG86	573064	PRJNA32615	32615	Euryarchaeota	Methanococci	1.50725	32.2088	chromosome:NC_013156.1/CP001696.1; plasmid pMEFER01:NC_013157.1/CP001697.1	-	2	1640	1554	8/28/09	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598490	GCA_000023985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/985/GCA_000023985.1_ASM2398v1	-	AG86
Mycobacterium tuberculosis PanR0315	1346778	PRJNA208583	208583	Terrabacteria group	Actinobacteria	4.40304	65.198	chromosome:NZ_CM002070.1/CM002070.1	ATEJ01	1	4330	4017	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471046	GCA_000443695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/695/GCA_000443695.1_fedora0315_IS	23884993	PanR0315
Staphylococcus stepanovicii	643214	PRJEB6403	251923	Terrabacteria group	Firmicutes	2.4391	32.2	chromosome 1:NZ_LT906462.1/LT906462.1	-	1	2416	2307	8/15/17	8/28/17	Complete Genome	SC	SAMEA4384403	GCA_900187075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/075/GCA_900187075.1_50432_F01	-	NCTC13839
Streptococcus pneumoniae GA16242	760780	PRJNA48717	48717	Terrabacteria group	Firmicutes	2.06963	39.8	-	AGPE01	12	2267	1957	10/25/11	3/8/17	Contig	Institute for Genome Sciences	SAMN00792749	GCA_000232665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/665/GCA_000232665.2_ASM23266v2	-	GA16242
Helicobacter pylori GAM250T	1159040	PRJNA89251	89251	Proteobacteria	delta/epsilon subdivisions	1.57918	39.4	-	APDP01	49	1564	1411	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436693	GCA_000345325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/325/GCA_000345325.2_ASM34532v2	-	GAM250T
Neisseria meningitidis NM2781	1069613	PRJNA71001	71001	Proteobacteria	Betaproteobacteria	2.16972	51.6	-	ALXR01	20	2536	2104	8/27/12	3/21/17	Contig	Institute for Genome Sciences	SAMN00849786	GCA_000293345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/345/GCA_000293345.1_ASM29334v1	-	NM2781
Streptococcus pyogenes ABC020057168	1439283	PRJNA233078	233078	Terrabacteria group	Firmicutes	1.86329	38.6	-	JJHY01	19	1946	1795	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567427	GCA_000631145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/145/GCA_000631145.1_Stre_pyog_ABC020057168_V1	-	ABC020057168
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.61999	34.9	-	JQOY01	234	4192	3821	2/24/16	3/27/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949574	GCA_001567825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/825/GCA_001567825.1_ASM156782v1	26833181	G32
Bacillus anthracis	1392	PRJNA264742	264742	Terrabacteria group	Firmicutes	5.44748	35.1	-	JSZY01	53	6055	5702	11/14/14	3/25/17	Scaffold	Georgia Institute of Technology	SAMN03165123	GCA_000783095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/095/GCA_000783095.1_ASM78309v1	-	2000032879
Shigella flexneri 2002140	1434167	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.4081	50.5	-	AZPT01	299	4848	4200	1/29/14	2/23/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437402	GCA_000566285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/285/GCA_000566285.1_ASM56628v1	-	2002140
Pseudomonas aeruginosa M8A.4	1402570	PRJNA219932	219932	Proteobacteria	Gammaproteobacteria	6.41912	66.3	-	AXOX01	5	6023	5884	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360742	GCA_000480555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/555/GCA_000480555.1_Pseu_aeru_3097_V1	-	M8A.4
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	3.79607	38.9	-	JSDA01	39	3696	3531	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068193	GCA_000805045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/045/GCA_000805045.1_ASM80504v1	25487793	2011BJAB9
Streptococcus agalactiae GB00874	1154934	PRJNA86541	86541	Terrabacteria group	Firmicutes	2.14857	35.4	-	ALUC01	40	2267	2132	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991451	GCA_000289615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/615/GCA_000289615.1_ASM28961v1	-	GB00874
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.15582	41.1	-	CEGZ01	121	2136	1993	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234087	GCA_000937775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/775/GCA_000937775.1_Velvet_assembly	-	S95N
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.40929	58.4	-	MTZI01	320	6287	5691	4/27/17	5/3/17	Contig	Massey University	SAMN06197091	GCA_002112125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/125/GCA_002112125.1_ASM211212v1	28369338	NZ47
Legionella pneumophila subsp. pneumophila	91891	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	3.46044	38.4	-	NBTW01	3	3143	2956	4/10/17	4/13/17	Contig	US Food and Drug Administration 	SAMN04875539	GCA_002082955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/955/GCA_002082955.1_ASM208295v1	-	FDAARGOS_202
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.44657	50.8	-	FTTC01	371	4965	4193	1/28/17	2/26/17	Contig	SC	SAMEA2054166	GCA_900157645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/645/GCA_900157645.1_9789_6_32	-	2090STDY5461746
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.64204	67.1	-	MUUQ01	249	7377	6869	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001948	GCA_001993055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/055/GCA_001993055.1_ASM199305v1	-	VC13124
Burkholderia pseudomallei MSHR3960	1434203	PRJNA230737	230737	Proteobacteria	Betaproteobacteria	7.30266	68.1	-	JPVJ01	2	7576	6942	11/11/14	4/10/17	Scaffold	Los Alamos National Laboratory	SAMN02948412	GCA_000774575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/575/GCA_000774575.1_BCW_2	25676747	MSHR3960
Chlamydia trachomatis	813	PRJEB2035	203744	PVC group	Chlamydiae	1.70859	35.9	-	CVNM01	355	1860	1804	4/21/15	6/14/15	Scaffold	SC	SAMEA1398206	GCA_001317765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/765/GCA_001317765.1_7396_3_18	-	R36176IMS
Bacillus thuringiensis serovar kurstaki	29339	PRJNA352635	352635	Terrabacteria group	Firmicutes	6.40826	34.7	-	MOXR01	225	6881	6350	11/17/16	4/5/17	Scaffold	Korea Research Institute of Bioscience and Biotechnology (KRIBB)	SAMN05990349	GCA_001880125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/125/GCA_001880125.1_ASM188012v1	-	BP865
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.0276	47.5	-	JSSY01	109	3823	3628	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104854	GCA_000788575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/575/GCA_000788575.1_ASM78857v1	25538191	2010AA-147
Clostridioides difficile DA00160	1151333	PRJNA85841	85841	Terrabacteria group	Firmicutes	4.13485	28.6	-	AVJH01	98	3808	3664	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766649	GCA_000450205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/205/GCA_000450205.2_ASM45020v2	-	DA00160
Francisella tularensis	263	PRJNA253522	253522	Proteobacteria	Gammaproteobacteria	1.86169	32.3	-	JPPI01	97	2008	1555	2/25/16	4/4/17	Scaffold	Swedish Defence Research Agency	SAMN02870483	GCA_001574565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/565/GCA_001574565.1_ASM157456v1	-	NO-9/2011
Brucella abortus NI622	1160173	PRJNA173567	173567	Proteobacteria	Alphaproteobacteria	3.28641	57.2	-	AQMS01	2	3377	3154	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811198	GCA_000366725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/725/GCA_000366725.1_Bruc_abor_NI622_V1	-	NI622
Staphylococcus simiae	308354	PRJEB6403	251923	Terrabacteria group	Firmicutes	2.64398	32.2	chromosome 1:NZ_LT906460.1/LT906460.1	-	1	2475	2351	8/15/17	8/28/17	Complete Genome	SC	SAMEA4384339	GCA_900187055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/055/GCA_900187055.1_50377_D01	-	NCTC13838
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.92557	37.9	-	MLON01	402	1992	1738	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297105	GCA_001869065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/065/GCA_001869065.1_ASM186906v1	27118061	AWRIB683
Vibrio parahaemolyticus S136	1394670	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.06506	45.3	-	AWIQ01	490	4820	4606	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338984	GCA_000489735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/735/GCA_000489735.1_S136	-	S136
Bacillus subtilis	1423	PRJNA266797	266797	Terrabacteria group	Firmicutes	4.04979	43.3	-	JXHP01	100	4305	4011	2/2/15	3/25/17	Scaffold	TIFN	SAMN03174423	GCA_000830715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/715/GCA_000830715.1_ASM83071v1	26988043	B4073
Francisella tularensis subsp. holarctica	119857	PRJNA242267	242267	Proteobacteria	Gammaproteobacteria	1.89278	32.2	chromosome:NZ_CP009693.1/CP009693.1	-	1	1959	1571	2/6/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03023737	GCA_000833235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/235/GCA_000833235.1_ASM83323v1	25931589	FTT_1
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	4.26731	27.9	-	LFPO01	66	4178	3958	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779981	GCA_001573905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/905/GCA_001573905.1_ASM157390v1	26939550	SU1306
Enterococcus faecalis EnGen0087	1157366	PRJNA88233	88233	Terrabacteria group	Firmicutes	3.33375	37.1	-	AIRZ01	30	3525	3372	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808930	GCA_000391505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/505/GCA_000391505.1_Ente_faec_B878_V1	-	B878
Streptococcus mutans U2B	857106	PRJNA49851	49851	Terrabacteria group	Firmicutes	1.96014	36.9	-	AGWE01	103	1973	1900	2/11/13	3/23/17	Contig	Cornell University	SAMN02428989	GCA_000340175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/175/GCA_000340175.1_ASM34017v1	23228887	U2B
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14656	52.4	-	CQKZ01	76	2525	2206	3/23/15	4/11/17	Contig	SC	SAMEA1690511	GCA_001131185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/185/GCA_001131185.1_8727_8_56	-	GCGS152
Enterococcus faecium EnGen0046	1138933	PRJNA82517	82517	Terrabacteria group	Firmicutes	3.07704	37.9	-	AHYI01	27	3146	2933	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779849	GCA_000322405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/405/GCA_000322405.1_Ente_faec_E2560_V1	-	E2560
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15759	41.1	-	CWEE01	82	2092	1919	6/24/15	3/26/17	Contig	SC	SAMEA1032921	GCA_001177705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/705/GCA_001177705.1_6903_7_48	-	EQUI0194
Brucella melitensis	29459	PRJNA344439	344439	Proteobacteria	Alphaproteobacteria	3.28223	57.2	-	NGJR01	37	3333	3022	8/23/17	8/25/17	Contig	Stavropol Plague Control Reseach Institute	SAMN05823560	GCA_002266765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/765/GCA_002266765.1_ASM226676v1	-	I-349
Francisella tularensis subsp. holarctica LVS	376619	PRJNA236485	236485	Proteobacteria	Gammaproteobacteria	1.89218	32.2	chromosome:NZ_CP009694.1/CP009694.1	-	1	1961	1577	2/6/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03010443	GCA_000833335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/335/GCA_000833335.1_ASM83333v1	25931589	LVS
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.44319	53.5	-	LSVY01	36	2342	2173	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496968	GCA_002203415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/415/GCA_002203415.1_S43	-	1270
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.85281	47.1	-	CTEV01	70	4591	4369	3/26/15	3/26/17	Scaffold	SC	SAMEA980197	GCA_001220485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/485/GCA_001220485.1_5116_2_9	-	YE30/03
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.10619	60	-	FCHI01	15	4847	4692	1/21/16	3/27/17	Scaffold	SC	SAMEA2273932	GCA_001536765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/765/GCA_001536765.1_12082_2_66	-	2880STDY5682859
Lactobacillus plantarum	1590	PRJNA283610	283610	Terrabacteria group	Firmicutes	3.34193	44.3	-	LEBK01	77	3289	3080	12/3/16	3/28/17	Contig	"Faculty of Agro-industry, Prince of Songkla University, wageningen university"	SAMN03654482	GCA_001888465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/465/GCA_001888465.1_ASM188846v1	-	P76
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.90928	30.9	-	LBDO01	168	2048	1895	10/27/15	3/18/17	Contig	FDA	SAMN03344576	GCA_001416985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/985/GCA_001416985.1_ASM141698v1	-	CVM N51090F
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.5864	32.6	-	CUFK01	73	2554	2411	3/31/15	3/26/17	Scaffold	SC	SAMEA1035124	GCA_001235645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/645/GCA_001235645.1_7068_7_15	-	F045
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.96896	55.1	-	JYMO01	100	4932	4678	3/13/15	3/25/17	Scaffold	University of Minnesota	SAMN03333165	GCA_000952415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/415/GCA_000952415.1_ASM95241v1	26438492	MNCRE25
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.61498	56.6	-	NCTT01	47	4513	4283	4/20/17	4/22/17	Scaffold	FDA/CFSAN	SAMN06697620	GCA_002101495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/495/GCA_002101495.1_ASM210149v1	-	MOD1_Comp47
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.13704	64.1	-	FRYO01	28	5161	5021	12/14/16	3/21/17	Contig	SC	SAMEA2071283	GCA_900130525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/525/GCA_900130525.1_10665_3_5	-	175
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.26321	63.1	-	DFWM01	61	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453745	GCA_002380885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/885/GCA_002380885.1_ASM238088v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.42468	67.2	-	LPEL01	89	6747	6388	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449459	GCA_001529345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/345/GCA_001529345.1_ASM152934v1	-	MSMB1225WGS
Acinetobacter pittii	48296	PRJNA310419	310419	Proteobacteria	Gammaproteobacteria	3.80731	38.7	-	LSAL01	16	3678	3535	8/29/16	4/5/17	Scaffold	The First Affiliated Hospital of Zhejiang Chinese Medical University	SAMN04452414	GCA_001716955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/955/GCA_001716955.1_ASM171695v1	-	TCM156
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.33392	54.8	-	LEEG01	63	5240	4993	6/9/15	3/26/17	Contig	JCVI	SAMN03732696	GCA_001023375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/375/GCA_001023375.1_ASM102337v1	-	GN02327
Pseudomonas sp. CFII68	911243	PRJNA59599	59599	Proteobacteria	Gammaproteobacteria	5.9196	60.8	-	ATLN01	128	5373	5157	6/27/13	4/17/17	Contig	Boise State University	SAMN02469403	GCA_000416195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/195/GCA_000416195.1_ASM41619v1	-	CFII68
Streptomyces sp. NRRL WC-3744	1463935	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.9783	71.9	-	JNXK01	239	9045	8406	7/1/14	3/11/17	Contig	University of Illinois	SAMN02645285	GCA_000717095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/095/GCA_000717095.1_ASM71709v1	-	NRRL WC-3744
Bacillus sp. 4048	1866310	PRJNA326282	326282	Terrabacteria group	Firmicutes	5.53143	35.1	-	MAOB01	107	5882	5579	11/18/16	4/16/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05231545	GCA_001884125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/125/GCA_001884125.1_ASM188412v1	-	4048
Acinetobacter sp. ANC 4945	1960941	PRJNA375749	375749	Proteobacteria	Gammaproteobacteria	3.41839	40.8	-	MVKX01	14	3272	3146	3/3/17	3/15/17	Contig	National Institute of Public Health	SAMN06344917	GCA_002018365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/365/GCA_002018365.1_ASM201836v1	-	ANC 4945
Clostridium sp. CAG:1000	1262768	PRJEB675	206606	Terrabacteria group	Firmicutes	1.12193	26.3	-	CAWE01	25	1174	1142	6/11/13	1/30/15	Scaffold	DTU	SAMEA3138733	GCA_000436975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/436/975/GCA_000436975.1_MGS1000	-	-
Staphylococcus sp. HMSC074F11	1715005	PRJNA296520	296520	Terrabacteria group	Firmicutes	2.46277	32	-	LTOJ01	75	2405	2273	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498669	GCA_001837885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/885/GCA_001837885.1_ASM183788v1	-	HMSC074F11
Streptococcus sp. 449_SSPC	1579339	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.09575	40.1	-	JVGR01	31	1950	1850	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197641	GCA_001073005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/005/GCA_001073005.1_ASM107300v1	26230489	449_SSPC
Prevotella sp. UBA2735	1947100	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.38493	50.5	-	DEJZ01	182	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06452042	GCA_002353715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/715/GCA_002353715.1_ASM235371v1	28894102	-
Mycobacterium sp. E796	1834151	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.53141	67.8	-	LZKK01	380	6379	5943	6/17/16	4/13/17	Contig	JCVI	SAMN04634244	GCA_001672815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/815/GCA_001672815.1_ASM167281v1	-	E796
Prochlorococcus sp. REDSEA-S17_B1	1811562	PRJNA289734	289734	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.0675	30.9	-	LUPS01	152	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534620	GCA_001627525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/627/525/GCA_001627525.1_ASM162752v1	27377622	-
Prochlorococcus sp. HOT208_60m_808A10	1961083	PRJNA375759	375759	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.16413	31.2	-	MWOZ01	558	-	-	3/14/17	3/14/17	Scaffold	Massachusetts Institute of Technology	SAMN06345443	GCA_002025965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/965/GCA_002025965.1_ASM202596v1	-	HOT208_60m_808A10
Mycobacterium sp. E740	1834149	PRJNA305922	305922	Terrabacteria group	Actinobacteria	4.61978	67.4	-	LZKP01	228	4507	4205	6/17/16	4/13/17	Contig	JCVI	SAMN04634201	GCA_001672895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/895/GCA_001672895.1_ASM167289v1	-	E740
Prevotella sp. UBA2728	1947098	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.23035	54.9	-	DEKG01	207	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06457129	GCA_002353735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/735/GCA_002353735.1_ASM235373v1	28894102	-
Streptococcus sp. CCUG 49591	1860161	PRJNA302716	302716	Terrabacteria group	Firmicutes	1.92866	40.1	-	LVJM01	49	1942	1796	5/24/16	4/12/17	Scaffold	TAILORED-Treatment project	SAMN04575401	GCA_001650315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/315/GCA_001650315.1_ASM165031v1	-	CCUG 49591
Staphylococcus sp. HMSC077C03	1715025	PRJNA296152	296152	Terrabacteria group	Firmicutes	2.44252	32	-	LTOH01	84	2400	2278	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498567	GCA_001837915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/915/GCA_001837915.1_ASM183791v1	-	HMSC077C03
Clostridium sp. CAG:470	1262812	PRJEB894	206879	Terrabacteria group	Firmicutes	1.57945	27.8	-	CBII01	65	1564	1535	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138740	GCA_000437115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/115/GCA_000437115.1_MGS470	-	-
Acinetobacter sp. ANC 5600	1960940	PRJNA375746	375746	Proteobacteria	Gammaproteobacteria	3.44947	40.4	-	MVKW01	18	3349	3165	3/3/17	3/15/17	Contig	National Institute of Public Health	SAMN06344897	GCA_002018395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/395/GCA_002018395.1_ASM201839v1	-	ANC 5600
Bacillus sp. 4049	1866311	PRJNA326283	326283	Terrabacteria group	Firmicutes	5.4877	35.3	-	MAOC01	101	5830	5520	11/18/16	4/16/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05231546	GCA_001884135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/135/GCA_001884135.1_ASM188413v1	-	4049
Streptomyces sp. NRRL B-12105	1463827	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.11953	72.3	-	JNZW01	201	7159	6741	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645351	GCA_000717635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/635/GCA_000717635.1_ASM71763v1	-	NRRL B-12105
Pseudomonas sp. CFII64	911242	PRJNA59597	59597	Proteobacteria	Gammaproteobacteria	6.41595	58.9	-	ATLO01	54	5847	5695	6/27/13	4/17/17	Contig	Boise State University	SAMN02469401	GCA_000416235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/235/GCA_000416235.1_ASM41623v1	-	CFII64
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.59596	55.6	-	LEEE01	24	4413	4239	6/9/15	3/26/17	Contig	JCVI	SAMN03732698	GCA_001023385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/385/GCA_001023385.1_ASM102338v1	-	GN02346
Acinetobacter pittii	48296	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.70707	38.7	-	LYGR01	92	3628	3448	11/2/16	4/5/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745511	GCA_001861625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/625/GCA_001861625.1_ASM186162v1	-	XH765
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.34313	67.2	-	LPFB01	119	6645	6273	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449475	GCA_001529475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/475/GCA_001529475.1_ASM152947v1	-	MSMB1342WGS
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.70102	59.8	-	DFXH01	140	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453441	GCA_002381675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/675/GCA_002381675.1_ASM238167v1	28894102	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21251	64.1	-	FVBU01	7	5325	5154	3/10/17	3/18/17	Contig	SC	SAMEA2070833	GCA_900130535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/535/GCA_900130535.1_10665_3_7	-	177
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.51928	56.6	-	NCTP01	34	4387	4171	4/20/17	4/22/17	Scaffold	FDA/CFSAN	SAMN06697623	GCA_002101515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/515/GCA_002101515.1_ASM210151v1	-	MOD1_GK800
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.93819	55.1	-	JYMI01	118	4906	4641	3/13/15	3/25/17	Scaffold	University of Minnesota	SAMN03333159	GCA_000952455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/455/GCA_000952455.1_ASM95245v1	26438492	MNCRE17
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.56812	32.7	-	CUCZ01	147	2568	2414	3/31/15	4/21/17	Scaffold	SC	SAMEA1035044	GCA_001235665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/665/GCA_001235665.1_7067_4_43	-	51-13
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.73473	31.3	-	LBDN01	58	1795	1693	10/27/15	3/18/17	Contig	FDA	SAMN03344577	GCA_001417005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/005/GCA_001417005.1_ASM141700v1	-	CVM N51183F
Lactobacillus plantarum	1590	PRJNA283610	283610	Terrabacteria group	Firmicutes	3.20526	44.5	-	LEBI01	39	3119	2973	12/3/16	3/28/17	Contig	"Faculty of Agro-industry, Prince of Songkla University, wageningen university"	SAMN03654489	GCA_001888485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/485/GCA_001888485.1_ASM188848v1	-	MHO2.4
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.36343	59.8	-	FCJK01	26	5143	4973	1/21/16	3/27/17	Scaffold	SC	SAMEA2274001	GCA_001536845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/845/GCA_001536845.1_12082_3_30	-	2880STDY5682929
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.5007	47	-	CTJG01	111	4223	3995	3/26/15	3/26/17	Scaffold	SC	SAMEA980180	GCA_001220565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/565/GCA_001220565.1_5103_7_10	-	YE153/02
Corynebacterium diphtheriae bv. mitis	1806053	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.44301	53.6	-	LSWC01	38	2394	2181	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496974	GCA_002203435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/435/GCA_002203435.1_S48	-	2370
Francisella tularensis subsp. holarctica	119857	PRJNA240115	240115	Proteobacteria	Gammaproteobacteria	1.89373	32.2	chromosome:NZ_CP010288.1/CP010288.1	-	1	1960	1568	2/6/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03251846	GCA_000833495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/495/GCA_000833495.1_ASM83349v1	25931589	VT68
Brucella melitensis	29459	PRJNA355376	355376	Proteobacteria	Alphaproteobacteria	3.28636	57.2	-	NGJP01	49	3359	2951	8/23/17	8/23/17	Contig	Stavropol Plague Control Reseach Institute	SAMN06075483	GCA_002266775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/775/GCA_002266775.1_ASM226677v1	-	I-216
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12562	41.2	-	CWBD01	79	2059	1876	6/23/15	3/26/17	Contig	SC	SAMEA1032922	GCA_001177725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/725/GCA_001177725.1_6903_4_59	-	EQUI0108
Enterococcus faecium EnGen0057	1138934	PRJNA82519	82519	Terrabacteria group	Firmicutes	2.94134	38.2	-	AHYJ01	16	2972	2771	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779850	GCA_000322425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/425/GCA_000322425.1_Ente_faec_E4389_V1	-	E4389
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.15094	52.4	-	CQON01	73	2518	2187	3/22/15	4/11/17	Contig	SC	SAMEA1690512	GCA_001131585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/585/GCA_001131585.1_8289_2_53	-	GCGS053
Streptococcus mutans 5DC8	1257037	PRJNA179252	179252	Terrabacteria group	Firmicutes	2.01095	36.9	-	AOBX01	9	2048	1902	3/21/13	3/23/17	Contig	Institute of Bioprocess and Biosystems Engineering	SAMN02469959	GCA_000347795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/795/GCA_000347795.1_5dc8_V1	23805886	5DC8
Enterococcus faecalis EnGen0108	1157367	PRJNA88235	88235	Terrabacteria group	Firmicutes	3.31778	37.1	-	AISA01	37	3496	3330	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808931	GCA_000391525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/525/GCA_000391525.1_Ente_faec_B939_V1	-	B939
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.87358	28.1	-	LFPP01	38	3672	3487	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03780006	GCA_001573935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/935/GCA_001573935.1_ASM157393v1	26939550	SU1575NT
Winogradskyella sp. PG-2	754409	PRJDB1597	246464	FCB group	Bacteroidetes/Chlorobi group	3.81148	32.2	chromosome:NZ_AP014583.1/AP014583.1	-	1	3457	3274	5/8/14	4/17/17	Complete Genome	"Atmosphere and Ocean Research Institute, Univ. Tokyo"	SAMD00000346	GCA_000828715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/715/GCA_000828715.1_ASM82871v1	24874677	PG-2
Bacillus subtilis	1423	PRJNA266797	266797	Terrabacteria group	Firmicutes	4.10453	43.7	-	JXLQ01	17	4257	4084	2/4/15	3/25/17	Scaffold	TIFN	SAMN03282622	GCA_000832195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/195/GCA_000832195.1_ASM83219v1	26988043	B4143
Vibrio parahaemolyticus S135	1394669	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.05883	45.3	-	AWIR01	434	4819	4624	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338983	GCA_000489755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/755/GCA_000489755.1_S135	-	S135
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.02191	38	-	MLOH01	427	2122	1825	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297099	GCA_001869085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/085/GCA_001869085.1_ASM186908v1	27118061	AWRIB625
Brucella abortus NI613	1160172	PRJNA173566	173566	Proteobacteria	Alphaproteobacteria	3.28593	57.2	-	AQMR01	6	3377	3153	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811197	GCA_000366745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/745/GCA_000366745.1_Bruc_abor_NI613_V1	-	NI613
Francisella tularensis	263	PRJNA253522	253522	Proteobacteria	Gammaproteobacteria	1.86434	32.3	-	JPPJ01	95	2002	1558	2/25/16	4/4/17	Scaffold	Swedish Defence Research Agency	SAMN02870485	GCA_001574585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/585/GCA_001574585.1_ASM157458v1	-	NO-11/2011
Clostridioides difficile DA00167	1151335	PRJNA85845	85845	Terrabacteria group	Firmicutes	4.10941	28.5	-	AVJJ01	135	3820	3610	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766650	GCA_000450245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/245/GCA_000450245.2_ASM45024v2	-	DA00167
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.0274	47.5	-	JSSZ01	124	3820	3638	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104855	GCA_000788595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/595/GCA_000788595.1_ASM78859v1	25538191	2010AA-148
Bacillus thuringiensis	1428	PRJNA359364	359364	Terrabacteria group	Firmicutes	6.05739	34.8	-	MSTN01	38	6318	5930	3/9/17	3/11/17	Scaffold	University of Alberta	SAMN06190351	GCA_002024545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/545/GCA_002024545.1_ASM202454v1	-	DNG9
Chlamydia trachomatis	813	PRJEB2035	203744	PVC group	Chlamydiae	18.7782	38.8	-	CVNZ01	15664	16615	16370	4/22/15	6/13/15	Scaffold	SC	SAMEA1398230	GCA_001398095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/095/GCA_001398095.1_7794_5_15	-	H17IMS
Burkholderia pseudomallei TSV 25	1434210	PRJNA230744	230744	Proteobacteria	Betaproteobacteria	7.28146	68.1	-	JPVK01	2	7514	6911	11/11/14	4/10/17	Scaffold	Los Alamos National Laboratory	SAMN02948500	GCA_000774625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/625/GCA_000774625.1_BCW_26	25676747	TSV 25
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.70165	67	-	MUUO01	175	7383	6928	2/10/17	3/30/17	Contig	University of British Columbia	SAMN05001946	GCA_001993075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/075/GCA_001993075.1_ASM199307v1	-	VC11138
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.6138	50.8	-	FTSJ01	417	5175	4422	1/28/17	3/2/17	Contig	SC	SAMEA2054393	GCA_900157795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/795/GCA_900157795.1_9789_6_67	-	2090STDY5461781
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.29514	38.2	-	FJAE01	19	3013	2908	2/20/16	3/27/17	Contig	SC	SAMEA2059978	GCA_900048905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/905/GCA_900048905.1_10771_1_30	-	2531STDY5467311
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.30967	58.5	-	MTZJ01	325	6170	5523	4/27/17	5/3/17	Contig	Massey University	SAMN06197093	GCA_002112135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/135/GCA_002112135.1_ASM211213v1	28369338	NZ49
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.15671	41.3	-	CEFN01	111	2076	1950	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233934	GCA_000937815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/815/GCA_000937815.1_Velvet_assembly	-	LS6K
Streptococcus agalactiae GB00884	1154935	PRJNA86543	86543	Terrabacteria group	Firmicutes	2.09523	35.2	-	ALUD01	34	2156	2045	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991432	GCA_000289635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/635/GCA_000289635.1_ASM28963v1	-	GB00884
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	3.97766	38.9	-	JSDC01	56	3874	3717	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068199	GCA_000805055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/055/GCA_000805055.1_ASM80505v1	25487793	2011GDAB1
Pseudomonas aeruginosa M8A.3	1402569	PRJNA219931	219931	Proteobacteria	Gammaproteobacteria	6.37141	66.3	-	AXOY01	4	5993	5831	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360741	GCA_000480575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/575/GCA_000480575.1_Pseu_aeru_3096_V1	-	M8A.3
Shigella flexneri 2003035	1434168	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.40009	50.5	-	AZPU01	300	4885	4021	1/29/14	3/5/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437403	GCA_000566305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/305/GCA_000566305.1_ASM56630v1	-	2003035
Bacillus anthracis	1392	PRJNA264742	264742	Terrabacteria group	Firmicutes	5.43193	35.1	-	JTAA01	56	6016	5676	11/14/14	3/25/17	Scaffold	Georgia Institute of Technology	SAMN03165125	GCA_000783115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/115/GCA_000783115.1_ASM78311v1	-	2000032951
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.69296	35	-	JQPD01	361	4354	3868	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949532	GCA_001567835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/835/GCA_001567835.1_ASM156783v1	26833181	56612
Streptococcus pyogenes ABC020052378	1439214	PRJNA233077	233077	Terrabacteria group	Firmicutes	1.87062	38.6	-	JJHZ01	7	1931	1804	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567426	GCA_000631165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/165/GCA_000631165.1_Stre_pyog_ABC020052378_V1	-	ABC020052378
Neisseria meningitidis 69166	1069614	PRJNA71003	71003	Proteobacteria	Betaproteobacteria	2.2187	51.7	-	ALXS01	25	2592	2188	8/27/12	3/21/17	Contig	Institute for Genome Sciences	SAMN00849763	GCA_000293365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/365/GCA_000293365.1_ASM29336v1	-	69166
Helicobacter pylori GAM252Bi	1159041	PRJNA89253	89253	Proteobacteria	delta/epsilon subdivisions	1.5777	39.4	-	APDQ01	46	1557	1415	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436849	GCA_000345345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/345/GCA_000345345.2_ASM34534v2	-	GAM252Bi
Streptococcus pneumoniae GA19451	760799	PRJNA48755	48755	Terrabacteria group	Firmicutes	2.09268	39.8	-	AGPL01	18	2279	1979	10/25/11	3/9/17	Contig	Institute for Genome Sciences	SAMN00792768	GCA_000232805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/805/GCA_000232805.2_ASM23280v2	-	GA19451
Francisella tularensis subsp. holarctica PHIT-FT049	1432652	PRJNA230014	230014	Proteobacteria	Gammaproteobacteria	1.88119	32.2	chromosome:NZ_CP007148.1/CP007148.1	-	1	1938	1505	1/30/14	4/10/17	Complete Genome	National Public Health Institute of Turkey	SAMN02641556	GCA_000524575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/575/GCA_000524575.1_ASM52457v1	-	PHIT-FT049
Mycobacterium tuberculosis PanR0314	1346779	PRJNA208582	208582	Terrabacteria group	Actinobacteria	4.39241	65.5499	chromosome:NZ_CM002073.1/CM002073.1	ATEK01	1	4292	4080	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471109	GCA_000443715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/715/GCA_000443715.1_fedora0314e_IS	23884993	PanR0314
Haemophilus influenzae 22.1-21	374927	PRJNA16398	16398	Proteobacteria	Gammaproteobacteria	1.88858	38	-	AAZD01	18	2296	2224	4/11/07	11/6/13	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393738	GCA_000169735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/735/GCA_000169735.1_ASM16973v1	17550610	22.1-21
Mycobacterium avium	1764	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.33517	69	-	NSEV01	107	5039	4770	9/12/17	9/14/17	Contig	University of Michigan Medical School	SAMN07528797	GCA_002292705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/705/GCA_002292705.1_ASM229270v1	-	FLAC0371
Bacillus cereus BAG1X2-3	1053175	PRJNA70315	70315	Terrabacteria group	Firmicutes	6.53174	34.8	-	AHCV01	19	6829	6327	5/16/13	3/24/17	Scaffold	Broad Institute	SAMN02596807	GCA_000399105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/105/GCA_000399105.1_Baci_cere_BAG1X2-3_V1	-	BAG1X2-3
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.51193	31.9	-	JUKK01	120	2462	2364	7/10/15	3/26/17	Contig	University of Washington	SAMN03198220	GCA_001075575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/575/GCA_001075575.1_ASM107557v1	26230489	998_SEPI
Listeria monocytogenes	1639	PRJNA326713	326713	Terrabacteria group	Firmicutes	3.05445	38	chromosome:NZ_CP018148.1/CP018148.1	-	1	3078	2940	12/6/16	3/2/17	Chromosome	N.F.Gamaleya Research Center for Epidemiology and Microbiology	SAMN05291439	GCA_001889585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/585/GCA_001889585.1_ASM188958v1	-	VIMVR081
Yersinia pestis PY-64	992164	PRJNA64355	64355	Proteobacteria	Gammaproteobacteria	4.682	47.5	-	AKSX01	974	4699	4211	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141485	GCA_000268945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/945/GCA_000268945.1_ASM26894v1	-	PY-64
Campylobacter jejuni 10186	1365653	PRJNA212338	212338	Proteobacteria	delta/epsilon subdivisions	1.65871	30.3	-	AUUG01	22	1765	1650	5/7/14	3/16/17	Scaffold	university of exeter	SAMN02744558	GCA_000686225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/225/GCA_000686225.1_Assembly_1	24856088	10186
Francisella tularensis subsp. holarctica F92	1232394	PRJNA175244	175244	Proteobacteria	Gammaproteobacteria	1.88689	32.2	chromosome:NC_019537.1/CP003932.1	-	1	1955	1521	11/19/12	4/10/17	Complete Genome	Bundeswehr Institute of Microbiology	SAMN02603045	GCA_000313385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/385/GCA_000313385.1_ASM31338v1	23405342	F92
Francisella tularensis subsp. holarctica FSC200	351581	PRJNA16087	16087	Proteobacteria	Gammaproteobacteria	1.89416	32.2	chromosome:NC_019551.1/CP003862.1	-	1	1963	1584	9/28/12	3/31/17	Complete Genome	University of Washington	SAMN01085703	GCA_000168775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/775/GCA_000168775.2_ASM16877v2	"1,700,072,323,209,220"	FSC200
Francisella noatunensis subsp. orientalis str. Toba 04	1163389	PRJNA82619	82619	Proteobacteria	Gammaproteobacteria	1.8472	32.2	chromosome:NC_017909.1/CP003402.1	-	1	1886	1418	5/10/12	3/30/17	Complete Genome	University of Bergen	SAMN02604140	GCA_000262205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/205/GCA_000262205.1_ASM26220v1	-	Toba 04
Francisella tularensis subsp. holarctica OSU18	393011	PRJNA32025	32025	Proteobacteria	Gammaproteobacteria	1.89573	32.2	chromosome:NC_017463.1/BK006741.1	-	1	1963	1558	10/17/08	3/29/17	Complete Genome	University of Maryland College Park	SAMN02641482	GCA_000011405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/405/GCA_000011405.1_ASM1140v1	18927608	OSU18
Campylobacter jejuni 255	1324967	PRJNA198636	198636	Proteobacteria	delta/epsilon subdivisions	1.63477	30.3	-	ARWS01	23	1713	1590	5/7/14	3/16/17	Scaffold	University of Exeter	SAMN02744562	GCA_000686265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/265/GCA_000686265.1_Assembly_1	24856088	255
Yersinia pestis PY-65	992165	PRJNA64357	64357	Proteobacteria	Gammaproteobacteria	4.64179	47.5	-	AKSY01	498	4537	4198	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141486	GCA_000268965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/965/GCA_000268965.1_ASM26896v1	-	PY-65
Listeria monocytogenes	1639	PRJNA326717	326717	Terrabacteria group	Firmicutes	2.9913	38.1	chromosome:NZ_CP018149.1/CP018149.1	-	1	3031	2790	12/6/16	3/3/17	Chromosome	N.F.Gamaleya Research Center for Epidemiology and Microbiology	SAMN05291441	GCA_001889645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/645/GCA_001889645.1_ASM188964v1	-	VIMHA007
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.44808	31.9	-	JUOU01	135	2384	2299	7/10/15	3/26/17	Contig	University of Washington	SAMN03198106	GCA_001075595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/595/GCA_001075595.1_ASM107559v1	26230489	899_SEPI
Bacillus cereus VD196	1053243	PRJNA70453	70453	Terrabacteria group	Firmicutes	6.43303	35.3	-	AHFL01	19	6699	6189	5/16/13	3/24/17	Scaffold	Broad Institute	SAMN02596875	GCA_000399125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/125/GCA_000399125.1_Baci_cere_VD196_V1	-	VD196
Mycobacterium avium	1764	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.41035	69	-	NSEY01	88	5163	4915	9/12/17	9/14/17	Contig	University of Michigan Medical School	SAMN07528794	GCA_002292725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/725/GCA_002292725.1_ASM229272v1	-	FLAC0260
Haemophilus influenzae R3021	375432	PRJNA16423	16423	Proteobacteria	Gammaproteobacteria	1.87561	38	-	AAZE01	46	2148	2098	4/11/07	11/6/13	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393742	GCA_000169755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/755/GCA_000169755.1_ASM16975v1	17550610	R3021
Mycobacterium tuberculosis PanR0309	1346782	PRJNA208579	208579	Terrabacteria group	Actinobacteria	4.39014	65.5499	chromosome:NZ_CM002071.1/CM002071.1	ATEN01	1	4245	4076	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471091	GCA_000443755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/755/GCA_000443755.1_fedora0309c_IS	23884993	PanR0309
Francisella tularensis subsp. holarctica FTNF002-00	458234	PRJNA20197	20197	Proteobacteria	Gammaproteobacteria	1.89091	32.2	chromosome:NC_009749.1/CP000803.1	-	1	1958	1571	8/23/07	3/30/17	Complete Genome	BioHealthBase	SAMN02603037	GCA_000017785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/785/GCA_000017785.1_ASM1778v1	19756146	FTNF002-00
Streptococcus pneumoniae GA47360	760833	PRJNA48857	48857	Terrabacteria group	Firmicutes	2.15921	39.8	-	AGPS01	16	2353	2056	10/25/11	3/9/17	Contig	Institute for Genome Sciences	SAMN00792662	GCA_000232945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/945/GCA_000232945.2_ASM23294v2	-	GA47360
Helicobacter pylori GAM252T	1159042	PRJNA89255	89255	Proteobacteria	delta/epsilon subdivisions	1.57842	39.4	-	APDR01	49	1562	1411	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436694	GCA_000345365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/365/GCA_000345365.2_ASM34536v2	-	GAM252T
Neisseria meningitidis NM576	1069615	PRJNA71005	71005	Proteobacteria	Betaproteobacteria	2.18975	51.5	-	ALXT01	27	2555	2140	8/27/12	3/21/17	Contig	Institute for Genome Sciences	SAMN00849791	GCA_000293385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/385/GCA_000293385.1_ASM29338v1	-	NM576
Streptococcus pyogenes ABC020043540	1439123	PRJNA233075	233075	Terrabacteria group	Firmicutes	1.85474	38.5	-	JJIA01	8	1901	1801	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567424	GCA_000631185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/185/GCA_000631185.1_Stre_pyog_ABC020043540_V1	-	ABC020043540
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.53407	35	-	JQPE01	221	4076	3715	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949533	GCA_001567885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/885/GCA_001567885.1_ASM156788v1	26833181	56618
Bacillus anthracis	1392	PRJNA264742	264742	Terrabacteria group	Firmicutes	5.44337	35.1	-	JTAB01	62	6038	5701	11/14/14	3/25/17	Scaffold	Georgia Institute of Technology	SAMN03165126	GCA_000783135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/135/GCA_000783135.1_ASM78313v1	-	2000032967
Shigella flexneri 2005002	1434169	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.40821	50.5	-	AZPV01	301	4900	4045	1/29/14	3/5/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437404	GCA_000566325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/325/GCA_000566325.1_ASM56632v1	-	2005002
Pseudomonas aeruginosa M8A.2	1402568	PRJNA219930	219930	Proteobacteria	Gammaproteobacteria	6.37626	66.4	-	AXOZ01	6	6020	5848	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360740	GCA_000480595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/595/GCA_000480595.1_Pseu_aeru_3095_V1	-	M8A.2
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	3.74378	39	-	JSDD01	20	3591	3462	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068241	GCA_000805065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/065/GCA_000805065.1_ASM80506v1	25487793	2011GDAB2
Streptococcus agalactiae GB00887	1154936	PRJNA86545	86545	Terrabacteria group	Firmicutes	2.01181	35.2	-	ALUE01	22	2078	1965	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991406	GCA_000289655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/655/GCA_000289655.1_ASM28965v1	-	GB00887
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.07765	41.2	-	CEJG01	129	2098	1979	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233990	GCA_000937875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/875/GCA_000937875.1_Velvet_assembly	-	S12Q
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.38333	58.4	-	MTZL01	314	6219	5609	4/27/17	5/3/17	Contig	Massey University	SAMN06197095	GCA_002112165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/165/GCA_002112165.1_ASM211216v1	28369338	NZ59
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.50735	38.3	-	FJAM01	36	3185	3050	2/20/16	3/27/17	Contig	SC	SAMEA2059981	GCA_900048915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/915/GCA_900048915.1_10060_4_36	-	2531STDY5467317
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.47941	50.8	-	FTTF01	377	4995	4238	1/28/17	2/26/17	Contig	SC	SAMEA2054157	GCA_900157805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/805/GCA_900157805.1_9789_6_23	-	2090STDY5461737
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.56002	67	-	MUVL01	201	7276	6749	2/10/17	4/10/17	Contig	University of British Columbia	SAMN05001973	GCA_001993095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/095/GCA_001993095.1_ASM199309v1	-	VC5402
Burkholderia pseudomallei MSHR4303	1434195	PRJNA230724	230724	Proteobacteria	Betaproteobacteria	7.15684	68.1	-	JPVM01	2	7356	6786	11/11/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02948531	GCA_000774635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/635/GCA_000774635.1_BCW_12	25676747	MSHR4303
Chlamydia trachomatis	813	PRJEB2035	203744	PVC group	Chlamydiae	1.32632	39.1	-	CVNV01	199	1312	1230	4/22/15	6/13/15	Scaffold	SC	SAMEA1398367	GCA_001398235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/235/GCA_001398235.1_7501_6_60	-	R3059extract
Bacillus thuringiensis serovar thuringiensis	1432	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.4653	34.9	-	NFCE01	109	6841	6422	5/17/17	6/15/17	Scaffold	Huazhong Agricultural University	SAMN05934488	GCA_002146335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/335/GCA_002146335.1_ASM214633v1	-	BGSC 4A4
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.02524	47.5	-	JSTA01	116	3807	3617	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104856	GCA_000788615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/615/GCA_000788615.1_ASM78861v1	25538191	2010AA-150
Clostridioides difficile DA00174	1151336	PRJNA85847	85847	Terrabacteria group	Firmicutes	4.0681	28.3	-	AVJK01	129	3814	3606	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766651	GCA_000450265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/265/GCA_000450265.2_ASM45026v2	-	DA00174
Francisella tularensis	263	PRJNA253522	253522	Proteobacteria	Gammaproteobacteria	1.85929	32.3	-	JPPK01	96	2002	1551	2/25/16	4/5/17	Scaffold	Swedish Defence Research Agency	SAMN02870488	GCA_001574605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/605/GCA_001574605.1_ASM157460v1	-	NO-14/2011
Brucella abortus NI633	1160174	PRJNA173568	173568	Proteobacteria	Alphaproteobacteria	3.28613	57.2	-	AQMU01	4	3377	3154	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811200	GCA_000366765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/765/GCA_000366765.1_Bruc_abor_NI633_V1	-	NI633
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.93507	38	-	MLOP01	319	1992	1756	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297107	GCA_001869125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/125/GCA_001869125.1_ASM186912v1	27118061	AWRIB708
Vibrio parahaemolyticus S134	1394668	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.18919	45.3	-	AWIS01	459	4974	4754	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338982	GCA_000489775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/775/GCA_000489775.1_S134	-	S134
Bacillus subtilis	1423	PRJNA295652	295652	Terrabacteria group	Firmicutes	4.56562	43.2	-	LJZV01	36	4945	4633	4/13/16	3/28/17	Scaffold	NIZO food research	SAMN04100265	GCA_001619555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/555/GCA_001619555.1_ASM161955v1	-	B4122
Francisella tularensis subsp. holarctica OSU18	393011	PRJNA17265	17265	Proteobacteria	Gammaproteobacteria	1.89573	32.2	chromosome:NC_008369.1/CP000437.1	-	1	1963	1558	9/20/06	3/30/17	Complete Genome	Baylor College of Medicine	SAMN02641482	GCA_000014605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/605/GCA_000014605.1_ASM1460v1	16980500	OSU18
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	4.23075	27.9	-	LFPQ01	50	4104	3899	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779963	GCA_001573955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/955/GCA_001573955.1_ASM157395v1	26939550	SU1274
Enterococcus faecalis EnGen0086	1157368	PRJNA88237	88237	Terrabacteria group	Firmicutes	2.96976	37.4	-	AISB01	10	3023	2850	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808932	GCA_000391545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/545/GCA_000391545.1_Ente_faec_HEF39_V1	-	HEF39
Streptococcus mutans KK21	1257038	PRJNA179253	179253	Terrabacteria group	Firmicutes	2.03459	36.8	-	AOBY01	2	2073	1940	3/21/13	3/23/17	Contig	Institute of Bioprocess and Biosystems Engineering	SAMN02469962	GCA_000347815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/815/GCA_000347815.1_KK21_V1	23805886	KK21
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14758	52.4	-	CQIC01	85	2512	2190	3/23/15	4/11/17	Contig	SC	SAMEA1690497	GCA_001131645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/645/GCA_001131645.1_8289_2_17	-	GCGS017
Enterococcus faecium EnGen0045	1138935	PRJNA82521	82521	Terrabacteria group	Firmicutes	3.10402	37.9	-	AHYK01	55	3144	2929	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779851	GCA_000322445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/445/GCA_000322445.1_Ente_faec_E6012_V1	-	E6012
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.13886	41.2	-	CWEY01	79	2081	1900	6/24/15	3/26/17	Contig	SC	SAMEA1032924	GCA_001177745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/745/GCA_001177745.1_6903_8_62	-	EQUI0207
Stenotrophomonas maltophilia	40324	PRJEB17324	351507	Proteobacteria	Gammaproteobacteria	4.14446	66.9	-	FOZF01	9	3735	3613	11/1/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487782	GCA_900113425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/425/GCA_900113425.1_IMG-taxon_2623620580_annotated_assembly	-	IAM 12423
Brucella melitensis	29459	PRJNA355380	355380	Proteobacteria	Alphaproteobacteria	3.28588	57.2	-	NGJO01	60	3367	2963	8/23/17	8/23/17	Contig	Stavropol Plague Control Reseach Institute	SAMN06075487	GCA_002266785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/785/GCA_002266785.1_ASM226678v1	-	I-338
Francisella tularensis subsp. holarctica LVS	376619	PRJNA16421	16421	Proteobacteria	Gammaproteobacteria	1.89599	32.2	chromosome:NC_007880.1/AM233362.1	-	1	1964	1580	3/2/06	3/29/17	Complete Genome	LLNL	SAMEA3138197	GCA_000009245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/245/GCA_000009245.1_ASM924v1	-	LVS
Corynebacterium diphtheriae bv. mitis	1806053	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.44713	53.6	-	LSWF01	42	2388	2183	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496977	GCA_002203455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/455/GCA_002203455.1_S51	-	2915
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.69826	47.1	-	CTRH01	45	4367	4191	3/26/15	3/26/17	Scaffold	SC	SAMEA980144	GCA_001220745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/745/GCA_001220745.1_4976_2_3	-	YE111/02
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.12567	60	-	FCKB01	17	4887	4713	1/21/16	3/27/17	Scaffold	SC	SAMEA2274022	GCA_001536895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/895/GCA_001536895.1_12082_3_47	-	2880STDY5682950
Lactobacillus plantarum	1590	PRJNA283610	283610	Terrabacteria group	Firmicutes	3.3481	44.4	-	LEBH01	50	3266	3089	12/3/16	3/28/17	Contig	"Faculty of Agro-industry, Prince of Songkla University, wageningen university"	SAMN03654490	GCA_001888495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/495/GCA_001888495.1_ASM188849v1	-	MHO2.5
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.73632	31.4	-	LBEV01	146	1796	1673	10/27/15	3/18/17	Contig	FDA	SAMN03344543	GCA_001417025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/025/GCA_001417025.1_ASM141702v1	-	CVM N39665
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.51417	32.7	-	CUGI01	63	2493	2348	3/31/15	3/26/17	Scaffold	SC	SAMEA1035080	GCA_001235705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/705/GCA_001235705.1_7068_7_40	-	113952
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	5.15053	54.8	-	JYMJ01	130	5118	4837	3/13/15	3/25/17	Scaffold	University of Minnesota	SAMN03333160	GCA_000952475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/475/GCA_000952475.1_ASM95247v1	26438492	MNCRE19
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.55846	56.7	-	NCWH01	9	4418	3941	4/24/17	4/26/17	Scaffold	FDA/CFSAN	SAMN06712278	GCA_002107715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/715/GCA_002107715.1_ASM210771v1	-	MOD1-LR713
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15684	64.1	-	FRYN01	23	5172	5025	12/14/16	3/21/17	Contig	SC	SAMEA2070427	GCA_900130555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/555/GCA_900130555.1_10665_3_6	-	176
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.21733	62.9	-	DFXN01	139	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452941	GCA_002381725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/725/GCA_002381725.1_ASM238172v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.18132	67.4	-	LPCI01	117	6487	6123	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449397	GCA_001529565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/565/GCA_001529565.1_ASM152956v1	-	MSMB2022WGS
Acinetobacter pittii	48296	PRJNA358441	358441	Proteobacteria	Gammaproteobacteria	3.84333	38.8	-	MSPO01	32	3704	3566	1/5/17	4/6/17	Scaffold	North-Eastern Hill University	SAMN06174116	GCA_001936495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/495/GCA_001936495.1_ASM193649v1	-	ABC
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.33138	54.8	-	LEEF01	58	5235	4994	6/9/15	3/26/17	Contig	JCVI	SAMN03732697	GCA_001023395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/395/GCA_001023395.1_ASM102339v1	-	GN02338
Pseudomonas sp. CFT9	911244	PRJNA59601	59601	Proteobacteria	Gammaproteobacteria	6.20533	59.8	-	ATLM01	67	5786	5610	6/27/13	4/17/17	Contig	Boise State University	SAMN02469400	GCA_000416255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/255/GCA_000416255.1_ASM41625v1	-	CFT9
Streptomyces sp. NRRL B-24484	1463833	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.86343	73.8	-	JOAI01	186	8116	7703	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645363	GCA_000717715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/715/GCA_000717715.1_ASM71771v1	-	NRRL B-24484
Bacillus sp. L27	1866312	PRJNA326284	326284	Terrabacteria group	Firmicutes	5.23104	35.2	-	MAOD01	72	5580	5343	11/18/16	4/16/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05231548	GCA_001884145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/145/GCA_001884145.1_ASM188414v1	-	L27
Acinetobacter sp. MF4640	1960826	PRJNA374968	374968	Proteobacteria	Gammaproteobacteria	3.79448	41.2	-	MVOM01	159	3754	3461	3/6/17	3/8/17	Contig	Nofima	SAMN06340231	GCA_002018895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/895/GCA_002018895.1_ASM201889v1	-	MF4640
Clostridium sp. CAG:440	1262807	PRJEB882	206829	Terrabacteria group	Firmicutes	1.44977	26.7	-	CBIP01	41	1448	1420	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138745	GCA_000437215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/215/GCA_000437215.1_MGS440	-	-
Staphylococcus sp. HMSC077D08	1715142	PRJNA296270	296270	Terrabacteria group	Firmicutes	2.51112	31.8	-	LTOG01	92	2483	2339	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498635	GCA_001837945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/945/GCA_001837945.1_ASM183794v1	-	HMSC077D08
Streptococcus sp. 'caviae'	1915004	PRJNA352333	352333	Terrabacteria group	Firmicutes	2.10861	42.3	-	MOWR01	29	2075	1961	1/5/17	4/16/17	Scaffold	Wageningen University	SAMN05969983	GCA_001937065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/065/GCA_001937065.1_ASM193706v1	-	Cavy grass 6
Prevotella sp. UBA2726	1947097	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.64676	51.9	-	DEKI01	109	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06457125	GCA_002353775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/775/GCA_002353775.1_ASM235377v1	28894102	-
Mycobacterium sp. 1245805.9	1856862	PRJNA305922	305922	Terrabacteria group	Actinobacteria	6.09882	68.4	-	LZKR01	228	5917	5558	6/17/16	4/13/17	Contig	JCVI	SAMN05202169	GCA_001672915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/915/GCA_001672915.1_ASM167291v1	-	1245805.9
Prochlorococcus sp. HOT212_60m_824O11	1961098	PRJNA375761	375761	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.999839	31.7	-	MWPD01	509	-	-	3/14/17	3/14/17	Scaffold	Massachusetts Institute of Technology	SAMN06345458	GCA_002026085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/085/GCA_002026085.1_ASM202608v1	-	HOT212_60m_824O11
Prochlorococcus sp. HOT208_60m_813O04	1961093	PRJNA375759	375759	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.14714	31.3	-	MWOP01	572	-	-	3/14/17	3/14/17	Scaffold	Massachusetts Institute of Technology	SAMN06345453	GCA_002026095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/095/GCA_002026095.1_ASM202609v1	-	HOT208_60m_813O04
Mycobacterium sp. 1137317.9	1834068	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.47356	69.5	-	LZKT01	191	5224	4906	6/17/16	4/13/17	Contig	JCVI	SAMN04634198	GCA_001672935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/935/GCA_001672935.1_ASM167293v1	-	1137317.9
Prevotella sp. UBA2725	1947096	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.74738	49.2	-	DEKJ01	64	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06457128	GCA_002353825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/825/GCA_002353825.1_ASM235382v1	28894102	-
Streptococcus sp. NLAE-zl-C503	1855327	PRJEB16302	348900	Terrabacteria group	Firmicutes	1.93806	40.9	-	FNJT01	19	1951	1802	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216494	GCA_900104285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/285/GCA_900104285.1_IMG-taxon_2654588205_annotated_assembly	-	NLAE-zl-C503
Staphylococcus sp. HMSC077D09	1715074	PRJNA296202	296202	Terrabacteria group	Firmicutes	2.44886	32	-	LTOF01	100	2392	2293	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498658	GCA_001837955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/955/GCA_001837955.1_ASM183795v1	-	HMSC077D09
Clostridium sp. CAG:411	1262802	PRJEB872	206794	Terrabacteria group	Firmicutes	3.03173	36	-	CBIY01	112	2650	2624	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138748	GCA_000437275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/275/GCA_000437275.1_MGS411	-	-
Acinetobacter sp. MF4642	1960825	PRJNA374971	374971	Proteobacteria	Gammaproteobacteria	3.3617	41.3	-	MVON01	92	3297	3042	3/6/17	3/8/17	Contig	Nofima	SAMN06340283	GCA_002018925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/925/GCA_002018925.1_ASM201892v1	-	MF4642
Bacillus sp. N35-10-2	1866313	PRJNA326285	326285	Terrabacteria group	Firmicutes	5.80624	35	-	MAOE01	142	6119	5670	11/18/16	4/16/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05231551	GCA_001884185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/185/GCA_001884185.1_ASM188418v1	-	N35-10-2
Streptomyces sp. NRRL WC-3702	1463929	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.51952	72	-	JOCC01	205	8374	7943	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645409	GCA_000717805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/805/GCA_000717805.1_ASM71780v1	-	NRRL WC-3702
Pseudomonas sp. P818	1336207	PRJNA204965	204965	Proteobacteria	Gammaproteobacteria	5.089	63.4	-	ATKM01	33	4757	4584	7/8/13	4/8/17	Contig	"Institute of Crop Sciences, Chinese Academy of Agricultural Sciences"	SAMN02469494	GCA_000418555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/555/GCA_000418555.1_ASM41855v1	24356842	P818
Enterobacter hormaechei	158836	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.96361	55.2	-	LEED01	296	4870	4620	6/9/15	3/26/17	Contig	JCVI	SAMN03732699	GCA_001023425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/425/GCA_001023425.1_ASM102342v1	-	GN02358
Acinetobacter pittii DSM 9306	981332	PRJNA62425	62425	Proteobacteria	Gammaproteobacteria	4.03044	38.8	-	AIEF01	321	-	-	2/21/12	1/8/14	Contig	University of Birmingham	SAMN02471595	GCA_000248235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/235/GCA_000248235.2_ASM24823v2	23259572	DSM 9306
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.20775	67.5	-	LPFC01	120	6525	6173	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449476	GCA_001529605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/605/GCA_001529605.1_ASM152960v1	-	MSMB1343WGS
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.99736	63.8	-	DGCG01	268	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455673	GCA_002384505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/505/GCA_002384505.1_ASM238450v1	28894102	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.90339	64.2	-	FVAZ01	15	4902	4786	3/10/17	3/18/17	Contig	SC	SAMEA2070429	GCA_900130575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/575/GCA_900130575.1_10060_8_12	-	182
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.33063	57	-	NCWD01	21	4175	3996	4/24/17	4/26/17	Scaffold	FDA/CFSAN	SAMN06712280	GCA_002107825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/825/GCA_002107825.1_ASM210782v1	-	MOD1-J172
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.8627	55.2	-	JYML01	164	4832	4523	3/13/15	3/25/17	Scaffold	University of Minnesota	SAMN03333162	GCA_000952495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/495/GCA_000952495.1_ASM95249v1	26438492	MNCRE57
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.44414	32.6	-	CUEC01	74	2390	2247	3/31/15	3/26/17	Scaffold	SC	SAMEA1035154	GCA_001235945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/945/GCA_001235945.1_7067_4_68	-	51-47
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.73722	31.3	-	LBEU01	95	1784	1691	10/27/15	3/18/17	Contig	FDA	SAMN03344544	GCA_001417035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/035/GCA_001417035.1_ASM141703v1	-	CVM N39671
Lactobacillus plantarum	1590	PRJNA283610	283610	Terrabacteria group	Firmicutes	3.33555	44.3	-	LEBG01	101	3275	3062	12/3/16	3/28/17	Contig	"Faculty of Agro-industry, Prince of Songkla University, wageningen university"	SAMN03654492	GCA_001888505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/505/GCA_001888505.1_ASM188850v1	-	MHO2.9
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.12798	60	-	FCKT01	14	4914	4757	1/21/16	3/27/17	Scaffold	SC	SAMEA2274038	GCA_001536945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/945/GCA_001536945.1_12082_3_63	-	2880STDY5682966
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.64142	47.1	-	CTIV01	35	4311	4132	3/26/15	3/26/17	Scaffold	SC	SAMEA980155	GCA_001220825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/825/GCA_001220825.1_4976_2_9	-	YE205/02
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.44822	53.5	-	LSYP01	33	2348	2183	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496980	GCA_002203465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/465/GCA_002203465.1_S54	-	3058
Staphylococcus epidermidis RP62A	176279	PRJNA64	64	Terrabacteria group	Firmicutes	2.64384	32.1969	chromosome:NC_002976.3/CP000029.1; plasmid pSERP:NC_006663.1/CP000028.1	-	2	2625	2462	1/9/02	3/22/17	Complete Genome	TIGR	SAMN02603975	GCA_000011925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/925/GCA_000011925.1_ASM1192v1	15774886	RP62A
Brucella melitensis	29459	PRJNA397974	397974	Proteobacteria	Alphaproteobacteria	3.28641	57.2	-	NQVD01	49	3359	2942	8/30/17	8/30/17	Contig	Stavropol Plague Control Reseach Institute	SAMN07498437	GCA_002278575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/575/GCA_002278575.1_ASM227857v1	-	I-280
Stenotrophomonas maltophilia SKK35	1118156	PRJEA77885	77885	Proteobacteria	Gammaproteobacteria	4.42031	66.8	-	CALN01	1418	4363	3109	3/31/13	1/30/15	Contig	Karlsruhe Institue of Technology - Institue of functional Interfaces	SAMEA2272795	GCA_000355745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/745/GCA_000355745.1_ASM35574v1	-	SKK35
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15756	41.1	-	CWEB01	79	2107	1920	6/24/15	3/26/17	Contig	SC	SAMEA1032925	GCA_001177765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/765/GCA_001177765.1_6903_7_47	-	EQUI0192
Enterococcus faecium EnGen0049	1138936	PRJNA82523	82523	Terrabacteria group	Firmicutes	3.02301	37.8	-	AHYL01	33	3123	2884	12/17/12	3/23/17	Scaffold	Broad Institute	SAMN00779852	GCA_000322465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/465/GCA_000322465.1_Ente_faec_E6045_V1	-	E6045
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.09683	52.6	-	CQNL01	78	2463	2125	3/22/15	4/11/17	Contig	SC	SAMEA1690316	GCA_001131965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/965/GCA_001131965.1_8727_8_22	-	GCGS118
Streptococcus mutans AC4446	1257040	PRJNA179255	179255	Terrabacteria group	Firmicutes	2.0037	36.9	-	AOCA01	42	2042	1884	3/21/13	3/23/17	Contig	Institute of Bioprocess and Biosystems Engineering 	SAMN02469957	GCA_000347855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/855/GCA_000347855.1_AC4446_V1	23805886	AC4446
Enterococcus faecalis EnGen0115	1157369	PRJNA88239	88239	Terrabacteria group	Firmicutes	3.07705	37.5	-	AISC01	10	3215	3047	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808933	GCA_000391565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/565/GCA_000391565.1_Ente_faec_UAA769_V1	-	UAA769
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	4.27498	27.9	-	LFPR01	61	4182	3981	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779964	GCA_001573965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/965/GCA_001573965.1_ASM157396v1	26939550	SU1917
Staphylococcus epidermidis	1282	PRJNA358169	358169	Terrabacteria group	Firmicutes	2.62533	32.1779	chromosome:CP018842.1;  Unknown:CP018841.1; plasmid pHOB1:CP018843.1; plasmid pHOB2:CP018844.1	-	4	2636	2407	1/5/17	1/5/17	Complete Genome	Aarhus University	SAMN06167133	GCA_001956655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/655/GCA_001956655.2_ASM195665v2	-	14.1.R1
Bacillus subtilis	1423	PRJNA312098	312098	Terrabacteria group	Firmicutes	4.23887	43.4	-	LWLQ01	2	4441	4067	5/10/16	4/10/17	Scaffold	Agriculture and Agri-Food Canada	SAMN04857057	GCA_001641145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/145/GCA_001641145.1_ASM164114v1	-	WAUSV36
Vibrio parahaemolyticus S133	1394667	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.04625	45.3	-	AWIT01	513	4804	4609	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338981	GCA_000489795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/795/GCA_000489795.1_S133	-	S133
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.97464	37.7	-	MLOU01	255	2066	1825	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297112	GCA_001869155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/155/GCA_001869155.1_ASM186915v1	27118061	AWRIB787
Brucella abortus NI645	1160176	PRJNA173570	173570	Proteobacteria	Alphaproteobacteria	3.28585	57.2	-	AQMW01	4	3376	3152	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811202	GCA_000366785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/785/GCA_000366785.1_Bruc_abor_NI645_V1	-	NI645
Francisella tularensis	263	PRJNA253522	253522	Proteobacteria	Gammaproteobacteria	1.85544	32.3	-	JPPF01	98	2024	1566	2/25/16	4/5/17	Scaffold	Swedish Defence Research Agency	SAMN02870479	GCA_001574695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/695/GCA_001574695.1_ASM157469v1	-	NO-5/2011
Clostridioides difficile DA00183	1151337	PRJNA85849	85849	Terrabacteria group	Firmicutes	4.07147	28.6	-	AVJL01	114	3774	3609	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766652	GCA_000450285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/285/GCA_000450285.2_ASM45028v2	-	DA00183
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.02813	47.5	-	JSTB01	118	3813	3625	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104857	GCA_000788635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/635/GCA_000788635.1_ASM78863v1	25538191	2010AA-151
Bacillus thuringiensis serovar cameroun	180885	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.31668	35.1	-	NFCI01	152	6740	6201	5/17/17	6/15/17	Scaffold	Huazhong Agricultural University	SAMN05934492	GCA_002146365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/365/GCA_002146365.1_ASM214636v1	-	BGSC 4AF1
Chlamydia trachomatis	813	PRJEB2035	203744	PVC group	Chlamydiae	1.67636	35.3	-	CVNN01	1238	1980	1937	4/22/15	6/13/15	Scaffold	SC	SAMEA1398401	GCA_001398315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/315/GCA_001398315.1_7396_3_19	-	R3059IMS
Burkholderia pseudomallei MSHR4000	1435370	PRJNA231182	231182	Proteobacteria	Betaproteobacteria	7.46388	67.9	-	JPVL01	3	7716	7084	11/11/14	4/10/17	Scaffold	Los Alamos National Laboratory	SAMN02948530	GCA_000774645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/645/GCA_000774645.1_BCW_5	25676747	MSHR4000
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.16468	67	-	MUVP01	149	7866	7317	2/10/17	4/2/17	Contig	University of British Columbia	SAMN05001978	GCA_001993115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/115/GCA_001993115.1_ASM199311v1	-	VC13755
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.4747	50.9	-	FTTP01	369	5039	4271	1/28/17	2/26/17	Contig	SC	SAMEA2054155	GCA_900157865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/865/GCA_900157865.1_9789_6_21	-	2090STDY5461735
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.57873	38.2	-	FJBY01	41	3290	3139	2/20/16	3/27/17	Contig	SC	SAMEA1973565	GCA_900048925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/925/GCA_900048925.1_10771_3_5	-	2531STDY5467382
Pseudomonas syringae	317	PRJNA362578	362578	Proteobacteria	Gammaproteobacteria	5.704	59.1	-	MTSA01	49	5176	4896	5/24/17	6/28/17	Contig	UCA	SAMN06242144	GCA_002157375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/375/GCA_002157375.1_ASM215737v1	-	PDD-32b-74
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.12939	41.3	-	CEHP01	106	2083	1966	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233956	GCA_000937915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/915/GCA_000937915.1_Velvet_assembly	-	LS9C
Streptococcus agalactiae GB00888	1154937	PRJNA86547	86547	Terrabacteria group	Firmicutes	2.02013	35.4	-	ALUF01	43	2064	1941	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991407	GCA_000289675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/675/GCA_000289675.1_ASM28967v1	-	GB00888
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	3.93368	39	-	JSDE01	57	3800	3646	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068244	GCA_000805115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/115/GCA_000805115.1_ASM80511v1	25487793	2011GDAB4
Pseudomonas aeruginosa M8A.1	1402567	PRJNA219929	219929	Proteobacteria	Gammaproteobacteria	6.36863	66.4	-	AXPA01	3	5984	5838	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360739	GCA_000480615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/615/GCA_000480615.1_Pseu_aeru_3094_V1	-	M8A.1
Shigella flexneri 2005025	1434170	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.44457	50.5	-	AZPW01	307	4936	3989	1/29/14	8/4/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437405	GCA_000566345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/345/GCA_000566345.1_ASM56634v1	-	2005025
Bacillus anthracis	1392	PRJNA264742	264742	Terrabacteria group	Firmicutes	5.29679	35.1	-	JTAC01	90	5921	5515	11/14/14	3/25/17	Scaffold	Georgia Institute of Technology	SAMN03165127	GCA_000783155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/155/GCA_000783155.1_ASM78315v1	-	2000032968
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.63997	35	-	JQPJ01	282	4225	3765	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949539	GCA_001567895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/895/GCA_001567895.1_ASM156789v1	26833181	56626
Streptococcus pyogenes ABC020033020	1439075	PRJNA233071	233071	Terrabacteria group	Firmicutes	1.82278	38.6	-	JJIB01	4	1871	1740	4/14/14	4/10/17	Scaffold	Broad Institute	SAMN02567420	GCA_000631205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/205/GCA_000631205.1_Stre_pyog_ABC020033020_V1	-	ABC020033020
Neisseria meningitidis 98008	1069616	PRJNA71007	71007	Proteobacteria	Betaproteobacteria	2.30388	51.5	-	ALXU01	36	2684	2235	8/27/12	3/21/17	Contig	Institute for Genome Sciences	SAMN00849778	GCA_000293405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/405/GCA_000293405.2_ASM29340v2	-	98008
Helicobacter pylori GAM254Ai	1159043	PRJNA89257	89257	Proteobacteria	delta/epsilon subdivisions	1.63675	39.2	-	APDS01	47	1604	1444	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436919	GCA_000345385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/385/GCA_000345385.2_ASM34538v2	-	GAM254Ai
Streptococcus pneumoniae GA47373	760835	PRJNA48861	48861	Terrabacteria group	Firmicutes	2.14592	39.6	-	AGPT01	10	2354	2048	10/25/11	3/8/17	Contig	Institute for Genome Sciences	SAMN00792664	GCA_000232965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/965/GCA_000232965.2_ASM23296v2	-	GA47373
Francisella hispaniensis FSC454	1088883	PRJNA73391	73391	Proteobacteria	Gammaproteobacteria	1.93864	32.1479	chromosome:NZ_CP018093.1/CP018093.1; plasmid pFSC454:NZ_CP018094.1/CP018094.1	-	2	1902	1718	11/22/16	4/16/17	Complete Genome	Swedish Defence Research Agency	SAMN00993432	GCA_001885235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/235/GCA_001885235.1_ASM188523v1	-	CCUG 58020
Mycobacterium tuberculosis PanR0313	1346780	PRJNA208581	208581	Terrabacteria group	Actinobacteria	4.40161	65.5499	chromosome:NZ_CM002072.1/CM002072.1	ATEL01	1	4269	4089	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471105	GCA_000443795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/795/GCA_000443795.1_fedora0313c_IS	23884993	PanR0313
Haemophilus influenzae 22.4-21	375063	PRJNA16396	16396	Proteobacteria	Gammaproteobacteria	1.8511	38	-	AAZJ01	44	2352	2307	4/13/07	11/6/13	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393803	GCA_000169855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/855/GCA_000169855.1_ASM16985v1	17550610	22.4-21
Mycobacterium avium	1764	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.34718	69	-	NSEZ01	93	5101	4858	9/12/17	9/14/17	Contig	University of Michigan Medical School	SAMN07528793	GCA_002292735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/735/GCA_002292735.1_ASM229273v1	-	FLAC0257
Bacillus cereus VD021	1053224	PRJNA70415	70415	Terrabacteria group	Firmicutes	6.09784	35.3	-	AHES01	14	6251	5815	5/16/13	3/24/17	Scaffold	Broad Institute	SAMN02596856	GCA_000399145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/145/GCA_000399145.1_Baci_cere_VD021_V1	-	VD021
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.49869	31.9	-	JUOJ01	101	2451	2350	7/10/15	3/26/17	Contig	University of Washington	SAMN03198117	GCA_001075605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/605/GCA_001075605.1_ASM107560v1	26230489	91_SEPI
Listeria monocytogenes serotype 1/2a str. 01-5252	1385998	PRJNA215183	215183	Terrabacteria group	Firmicutes	2.97444	37.9	chromosome:CP007538.1	-	1	3063	3004	6/30/17	6/30/17	Chromosome	Public Health Agency of Canada	SAMN02725064	GCA_002213525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/525/GCA_002213525.1_ASM221352v1	-	Jan-52
Yersinia pestis PY-71	992167	PRJNA64361	64361	Proteobacteria	Gammaproteobacteria	4.49849	47.5	-	AKTA01	477	4405	4062	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141488	GCA_000268985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/985/GCA_000268985.1_ASM26898v1	-	PY-71
Campylobacter jejuni 10227	1327986	PRJNA198761	198761	Proteobacteria	delta/epsilon subdivisions	1.71769	30.2	-	AUUI01	24	1783	1653	5/7/14	3/16/17	Scaffold	university of exeter	SAMN02744561	GCA_000686285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/285/GCA_000686285.1_Assembly_1	24856088	10227
Desulfurella acetivorans A63	694431	PRJNA76511	76511	Proteobacteria	delta/epsilon subdivisions	1.81999	32.1021	chromosome:NZ_CP007051.1/CP007051.1; plasmid unnamed:NZ_CP007052.1/CP007052.1	-	2	1888	1814	1/13/14	4/17/17	Complete Genome	JGI	SAMN02769651	GCA_000517565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/565/GCA_000517565.1_ASM51756v1	-	A63
Francisella tularensis subsp. holarctica	119857	PRJNA240117	240117	Proteobacteria	Gammaproteobacteria	1.89419	32.1	chromosome:NZ_CP010289.1/CP010289.1	-	1	1960	1573	2/6/15	4/3/17	Complete Genome	Los Alamos National Laboratory	SAMN03251848	GCA_000833515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/515/GCA_000833515.1_ASM83351v1	25931589	425
Cellulophaga lytica	979	PRJNA256111	256111	FCB group	Bacteroidetes/Chlorobi group	3.8242	32.1	chromosome:NZ_CP009239.1/CP009239.1	-	1	3356	3277	9/9/14	4/9/17	Complete Genome	University of Hawaii at Manoa	SAMN02937577	GCA_000750195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/195/GCA_000750195.1_ASM75019v1	-	HI1
Wolbachia endosymbiont of Onchocerca volvulus str. Cameroon	1410384	PRJEB4840	236363	Proteobacteria	Alphaproteobacteria	0.960618	32.1	chromosome I:NZ_HG810405.1/HG810405.1	-	1	763	649	1/23/14	4/9/17	Complete Genome	WTSI	SAMEA3138891	GCA_000530755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/755/GCA_000530755.1_W_O_volvulus_Cameroon_v3	-	Cameroon
Campylobacter jejuni 30318	1365656	PRJNA212373	212373	Proteobacteria	delta/epsilon subdivisions	1.70117	30.3	-	AUUJ01	26	1817	1698	5/7/14	3/16/17	Scaffold	University of Exeter	SAMN02744565	GCA_000686305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/305/GCA_000686305.1_Assembly_1	24856088	30318
Yersinia pestis PY-72	992168	PRJNA64363	64363	Proteobacteria	Gammaproteobacteria	4.47161	47.5	-	AKTB01	544	4411	4057	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141489	GCA_000269005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/005/GCA_000269005.1_ASM26900v1	-	PY-72
Listeria monocytogenes serotype 1/2a str. 01-1468	1385997	PRJNA215182	215182	Terrabacteria group	Firmicutes	3.02176	37.9	chromosome:CP007527.1	-	1	3109	3048	6/30/17	6/30/17	Chromosome	Public Health Agency of Canada	SAMN02693102	GCA_002214025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/025/GCA_002214025.1_ASM221402v1	-	01-1468
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.40896	31.9	-	JUNX01	271	2371	2241	7/10/15	3/26/17	Contig	University of Washington	SAMN03198129	GCA_001075635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/635/GCA_001075635.1_ASM107563v1	26230489	917_SEPI
Bacillus cereus BAG1O-1	1053167	PRJNA70299	70299	Terrabacteria group	Firmicutes	6.03922	35.3	-	AHCN01	13	6447	5964	5/16/13	4/10/17	Scaffold	Broad Institute	SAMN02596799	GCA_000399165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/165/GCA_000399165.1_Baci_cere_BAG1O-1_V1	-	BAG1O-1
Mycobacterium avium	1764	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.61457	68.8	-	NSEU01	149	5377	5089	9/12/17	9/14/17	Contig	University of Michigan Medical School	SAMN07528798	GCA_002292745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/745/GCA_002292745.1_ASM229274v1	-	FLAC0376
Haemophilus influenzae	727	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	2.10593	39.6	-	JVRO01	27	-	-	7/10/15	7/13/16	Contig	University of Washington	SAMN03197358	GCA_001071575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/575/GCA_001071575.1_ASM107157v1	26230489	167_HINF
Mycobacterium tuberculosis PanR0308	1346783	PRJNA208578	208578	Terrabacteria group	Actinobacteria	4.39153	65.5499	chromosome:NZ_CM002076.1/CM002076.1	ATEO01	1	4271	4067	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471047	GCA_000443815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/815/GCA_000443815.1_fedora0308g_IS	23884993	PanR0308
Wolbachia endosymbiont of Onchocerca ochengi	100901	PRJEA81837	81837	Proteobacteria	Alphaproteobacteria	0.95799	32.1	chromosome:NC_018267.1/HE660029.1	-	1	759	651	7/30/12	4/17/17	Complete Genome	University of Liverpool	SAMEA2272360	GCA_000306885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/885/GCA_000306885.1_ASM30688v1	22919073	wOo
Streptococcus pneumoniae GA47388	760837	PRJNA48865	48865	Terrabacteria group	Firmicutes	2.14061	39.7	-	AGPU01	7	2368	2058	10/25/11	3/9/17	Contig	Institute for Genome Sciences	SAMN00792665	GCA_000232985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/985/GCA_000232985.2_ASM23298v2	-	GA47388
Helicobacter pylori GAM260ASi	1159044	PRJNA89259	89259	Proteobacteria	delta/epsilon subdivisions	1.62889	39.2	-	APDT01	59	1600	1461	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436850	GCA_000345405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/405/GCA_000345405.2_ASM34540v2	-	GAM260ASi
Neisseria meningitidis 80179	1069617	PRJNA71009	71009	Proteobacteria	Betaproteobacteria	2.18772	51.6	-	ALXV01	31	2561	2158	8/27/12	3/21/17	Contig	Institute for Genome Sciences	SAMN00849764	GCA_000293425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/425/GCA_000293425.1_ASM29342v1	-	80179
Streptococcus pyogenes ABC020030063	1439060	PRJNA233070	233070	Terrabacteria group	Firmicutes	1.84487	38.5	-	JJIC01	8	1911	1796	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567419	GCA_000631225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/225/GCA_000631225.1_Stre_pyog_ABC020030063_V1	-	ABC020030063
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.83438	35	-	JQPK01	332	4377	3919	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949540	GCA_001567905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/905/GCA_001567905.1_ASM156790v1	26833181	56627
Bacillus anthracis	1392	PRJNA264742	264742	Terrabacteria group	Firmicutes	5.43915	35.1	-	JTAD01	51	6020	5704	11/14/14	3/25/17	Scaffold	Georgia Institute of Technology	SAMN03165128	GCA_000783165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/165/GCA_000783165.1_ASM78316v1	-	2000032975
Shigella flexneri 2005051	1434171	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.41747	50.5	-	AZPX01	302	4876	4213	1/29/14	2/22/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437406	GCA_000566365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/365/GCA_000566365.1_ASM56636v1	-	2005051
Pseudomonas aeruginosa BL25	1402566	PRJNA219928	219928	Proteobacteria	Gammaproteobacteria	6.57489	66.2	-	AXPB01	7	6220	6060	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360738	GCA_000480645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/645/GCA_000480645.1_Pseu_aeru_BL25_V1	-	BL25
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	4.10432	39.1	-	JSDF01	61	4019	3856	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068246	GCA_000805125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/125/GCA_000805125.1_ASM80512v1	25487793	2011HNAB1
Streptococcus agalactiae GB00899	1154942	PRJNA86557	86557	Terrabacteria group	Firmicutes	2.06924	35.3	-	ALUJ01	233	2265	2023	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991438	GCA_000289695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/695/GCA_000289695.1_ASM28969v1	-	GB00899
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.25626	41.1	-	CEER01	166	2218	2094	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233939	GCA_000937935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/935/GCA_000937935.1_Velvet_assembly	-	LS7A
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.24539	58.5	-	MTHL01	337	6015	5432	4/28/17	6/9/17	Contig	Massey University	SAMN06197050	GCA_002174895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/895/GCA_002174895.1_ASM217489v1	28369338	C12
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.49953	38.3	-	FJCC01	63	3190	3049	2/20/16	3/27/17	Contig	SC	SAMEA2065574	GCA_900048935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/935/GCA_900048935.1_10771_3_6	-	2531STDY5467383
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.45998	50.8	-	FTTJ01	372	5002	4208	1/28/17	2/26/17	Contig	SC	SAMEA2054149	GCA_900157935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/935/GCA_900157935.1_9789_6_16	-	2090STDY5461729
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.77742	67.1	-	MURR01	140	7496	6979	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001855	GCA_001993135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/135/GCA_001993135.1_ASM199313v1	-	VC5748
Burkholderia pseudomallei MSHR303	1435982	PRJNA231468	231468	Proteobacteria	Betaproteobacteria	7.42874	67.9	-	JQDD01	2	7684	7099	11/11/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02997356	GCA_000774695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/695/GCA_000774695.1_BPB	25676747	MSHR303
Chlamydia trachomatis	813	PRJEB2035	203744	PVC group	Chlamydiae	1.03989	41.4	-	CVNO01	1371	909	890	4/22/15	6/13/15	Scaffold	SC	SAMEA1398413	GCA_001398335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/335/GCA_001398335.1_7396_3_20	-	R33512IMS
Bacillus thuringiensis serovar fukuokaensis	132265	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.27118	34.8	-	NFCN01	110	6560	6028	5/17/17	5/24/17	Scaffold	Huazhong Agricultural University	SAMN05934501	GCA_002146425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/425/GCA_002146425.1_ASM214642v1	-	BGSC 4AP1
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.02825	47.5	-	JSTC01	119	3822	3665	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104879	GCA_000788655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/655/GCA_000788655.1_ASM78865v1	-	2012Env-131
Clostridioides difficile DA00191	1151339	PRJNA85853	85853	Terrabacteria group	Firmicutes	4.23555	28.2	-	AVJN01	87	3998	3755	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766654	GCA_000450305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/305/GCA_000450305.2_ASM45030v2	-	DA00191
Francisella tularensis	263	PRJNA253522	253522	Proteobacteria	Gammaproteobacteria	1.85557	32.3	-	JPPH01	97	2006	1561	2/25/16	4/4/17	Scaffold	Swedish Defence Research Agency	SAMN02870484	GCA_001574755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/755/GCA_001574755.1_ASM157475v1	-	NO-10/2011
Brucella abortus NI649	1160162	PRJNA173555	173555	Proteobacteria	Alphaproteobacteria	3.28603	57.2	-	AQMX01	6	3375	3153	4/16/13	3/23/17	Contig	Broad Institute	SAMN00811204	GCA_000366805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/366/805/GCA_000366805.1_Bruc_abor_NI649_V1	-	NI649
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.93097	37.7	-	MLOV01	246	1944	1734	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297113	GCA_001869165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/165/GCA_001869165.1_ASM186916v1	27118061	AWRIB791
Vibrio parahaemolyticus S132	1394666	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.10487	45.2	-	AWIU01	421	4899	4676	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338980	GCA_000489815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/815/GCA_000489815.1_S132	-	S132
Bacillus subtilis	1423	PRJNA327291	327291	Terrabacteria group	Firmicutes	4.18264	43	-	MBPE01	67	4513	4228	9/14/16	3/28/17	Scaffold	Fatima Jinnah Women University	SAMN05328038	GCA_001726025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/025/GCA_001726025.1_ASM172602v1	-	MB378
Klebsiella pneumoniae subsp. rhinoscleromatis SB3432	861365	PRJNA50357	50357	Proteobacteria	Gammaproteobacteria	5.38445	57.105	chromosome:NC_021232.1/FO203501.1; plasmid pKRH:NC_021231.1/FO203500.1	-	2	5514	4845	5/15/13	2/21/17	Chromosome	Institut Pasteur	SAMEA3283109	GCA_000967845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/845/GCA_000967845.1_ASM96784v1	21629720	SB3432
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	4.01096	28.1	-	LFPS01	67	3831	3624	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779965	GCA_001573985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/985/GCA_001573985.1_ASM157398v1	26939550	SU1887
Enterococcus faecalis EnGen0101	1157370	PRJNA88241	88241	Terrabacteria group	Firmicutes	3.36582	37.3	-	AISD01	26	3507	3298	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808934	GCA_000391585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/585/GCA_000391585.1_Ente_faec_UAA823_V1	-	UAA823
Streptococcus mutans ATCC 25175	1257041	PRJNA179256	179256	Terrabacteria group	Firmicutes	1.99967	36.9	-	AOCB01	10	2032	1890	3/21/13	3/23/17	Contig	Institute of Bioprocess and Biosystems Engineering 	SAMN02469958	GCA_000347875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/875/GCA_000347875.1_ATCC25175_V1	23805886	ATCC 25175
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.14463	52.4	-	CQIJ01	67	2498	2182	3/22/15	4/11/17	Contig	SC	SAMEA1677294	GCA_001132085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/085/GCA_001132085.1_8727_5_83	-	GCGS233
Enterococcus faecium EnGen0006	1138893	PRJNA82437	82437	Terrabacteria group	Firmicutes	2.86864	38	-	AHWU01	18	2915	2697	5/3/13	4/10/17	Scaffold	Broad Institute	SAMN00779805	GCA_000390465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/465/GCA_000390465.1_Ente_faec_E1293_V1	-	E1293
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.13297	41.2	-	CVYF01	79	2074	1878	6/24/15	3/26/17	Contig	SC	SAMEA1032926	GCA_001177785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/785/GCA_001177785.1_6830_4_75	-	EQUI0220
Stenotrophomonas maltophilia	40324	PRJNA277559	277559	Proteobacteria	Gammaproteobacteria	4.15025	66.4	-	JZRZ01	30	3956	1050	4/17/15	4/17/15	Contig	"SANKARA NETHRALAYA, VISION RESEARCH FOUNDATION"	SAMN03393603	GCA_000973145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/145/GCA_000973145.1_ASM97314v1	-	JMNMN1
Brucella melitensis	29459	PRJNA397965	397965	Proteobacteria	Alphaproteobacteria	3.28933	57.2	-	NQVC01	56	3368	2904	8/30/17	8/30/17	Contig	Stavropol Plague Control Reseach Institute	SAMN07498373	GCA_002278585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/585/GCA_002278585.1_ASM227858v1	-	I-160
Cellulophaga lytica DSM 7489	867900	PRJNA50743	50743	FCB group	Bacteroidetes/Chlorobi group	3.76594	32.1	chromosome:NC_015167.1/CP002534.1	-	1	3324	3248	2/28/11	4/7/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713590	GCA_000190595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/595/GCA_000190595.1_ASM19059v1	21677859	DSM 7489
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.38699	53.5	-	LSWI01	54	2309	2125	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496981	GCA_002203495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/495/GCA_002203495.1_S55	-	5027
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.45096	46.9	-	CTKS01	105	4167	3934	3/26/15	3/26/17	Scaffold	SC	SAMEA980181	GCA_001221085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/085/GCA_001221085.1_5116_2_5	-	YE218/02
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.15024	60	-	FCJX01	19	4897	4745	1/21/16	3/27/17	Scaffold	SC	SAMEA2274014	GCA_001536965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/965/GCA_001536965.1_12082_3_42	-	2880STDY5682942
Lactobacillus plantarum	1590	PRJNA283610	283610	Terrabacteria group	Firmicutes	3.39396	44.2	-	LEBF01	37	3325	3153	12/3/16	3/28/17	Contig	"Faculty of Agro-industry, Prince of Songkla University, wageningen university"	SAMN03654356	GCA_001888525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/525/GCA_001888525.1_ASM188852v1	-	A3
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.73829	31.3	-	LBET01	27	1800	1705	10/27/15	3/18/17	Contig	FDA	SAMN03344545	GCA_001417065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/065/GCA_001417065.1_ASM141706v1	-	CVM N39677
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.50854	32.6	-	CUGH01	95	2504	2372	3/31/15	4/21/17	Scaffold	SC	SAMEA1035066	GCA_001236145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/145/GCA_001236145.1_7068_7_39	-	123268
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.92261	55.1	-	JYMA01	97	4889	4615	3/13/15	3/25/17	Scaffold	University of Minnesota	SAMN03333151	GCA_000952505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/505/GCA_000952505.1_ASM95250v1	26438492	MNCRE28
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.445	56.9	-	NCWM01	6	4184	3999	4/24/17	4/26/17	Scaffold	FDA/CFSAN	SAMN06712285	GCA_002107865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/865/GCA_002107865.1_ASM210786v1	-	MOD1-2151
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.2141	64.1	-	FVAO01	7	5329	5152	3/10/17	3/18/17	Contig	SC	SAMEA2071286	GCA_900130585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/585/GCA_900130585.1_10060_8_14	-	184
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.34371	64.3	-	DGCT01	15	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457286	GCA_002385035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/035/GCA_002385035.1_ASM238503v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.10491	67.5	-	LPFI01	89	6390	6058	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449482	GCA_001529655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/655/GCA_001529655.1_ASM152965v1	-	MSMB1472WGS
Acinetobacter pittii DSM 21653	981326	PRJNA62415	62415	Proteobacteria	Gammaproteobacteria	3.74632	38.8	-	AIEK01	458	-	-	2/21/12	1/8/14	Contig	University of Birmingham	SAMN02471596	GCA_000248335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/335/GCA_000248335.2_ASM24833v2	23259572	DSM 21653
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.07793	55	-	JUXX01	409	5005	4755	7/10/15	3/26/17	Contig	University of Washington	SAMN03197869	GCA_001057845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/845/GCA_001057845.1_ASM105784v1	26230489	665_ECLO
Pseudomonas sp. EGD-AK9	1386078	PRJNA215167	215167	Proteobacteria	Gammaproteobacteria	5.10204	65.6	-	AVOF01	1015	5162	4340	9/12/13	4/11/17	Contig	National Environmental Engineering Research Institute	SAMN02470627	GCA_000465935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/935/GCA_000465935.2_Pseudomonas_sp._EGD-AK9	-	EGD-AK9
Streptomyces sp. NRRL S-455	1463908	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.23274	70.9	-	JOCT01	120	7540	7122	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645426	GCA_000717875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/875/GCA_000717875.1_ASM71787v1	-	NRRL S-455
Bacillus sp. NH11B	1866314	PRJNA326287	326287	Terrabacteria group	Firmicutes	5.83613	35.1	-	MAOG01	156	6197	5693	11/18/16	4/16/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05231552	GCA_001884205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/205/GCA_001884205.1_ASM188420v1	-	NH11B
Acinetobacter sp. ANC 4655	1977878	PRJNA380882	380882	Proteobacteria	Gammaproteobacteria	3.37297	40.1	-	NEGF01	26	3311	3112	5/15/17	5/23/17	Contig	National Institute of Public Health	SAMN06641966	GCA_002135195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/195/GCA_002135195.1_ASM213519v1	-	ANC 4655
Clostridium sp. CAG:288	1262791	PRJEB812	206807	Terrabacteria group	Firmicutes	1.63972	30.4	-	CBIJ01	33	1546	1500	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138754	GCA_000437395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/395/GCA_000437395.1_MGS288	-	-
Staphylococcus sp. HMSC077G12	1715162	PRJNA296290	296290	Terrabacteria group	Firmicutes	2.49182	31.9	-	LWPY01	91	2449	2327	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498693	GCA_001837975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/975/GCA_001837975.1_ASM183797v1	-	HMSC077G12
Finegoldia magna ATCC 29328	334413	PRJDA18981	18981	Terrabacteria group	Firmicutes	1.98674	32.0524	chromosome:NC_010376.1/AP008971.1; plasmid pFMC:NC_010371.1/AP008972.1	-	2	1899	1822	2/14/08	3/29/17	Complete Genome	Kitasato Institute for Life Sciences	SAMD00060918	GCA_000010185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/185/GCA_000010185.1_ASM1018v1	18263572	ATCC 29328
Prevotella sp. UBA2711	1947095	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.12039	47.1	-	DEKX01	50	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06451795	GCA_002354095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/095/GCA_002354095.1_ASM235409v1	28894102	-
Mycobacterium sp. 1465703.0	1834078	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.92202	65.9	-	LZKU01	297	5628	5142	6/17/16	4/13/17	Contig	JCVI	SAMN04634158	GCA_001672975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/975/GCA_001672975.1_ASM167297v1	-	1465703
Prochlorococcus sp. HOT212_60m_823D04	1961095	PRJNA375761	375761	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.390622	31.3	-	MWPG01	190	-	-	3/14/17	3/14/17	Scaffold	Massachusetts Institute of Technology	SAMN06345455	GCA_002026245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/245/GCA_002026245.1_ASM202624v1	-	HOT212_60m_823D04
Prochlorococcus sp. UBA1269	1947242	PRJNA348753	348753	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.60602	52.6	-	DBVH01	207	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06451922	GCA_002308455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/455/GCA_002308455.1_ASM230845v1	28894102	-
Mycobacterium sp. 1482292.6	1834081	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.71425	67.8	-	LZKV01	266	5452	5059	6/17/16	4/13/17	Contig	JCVI	SAMN04634157	GCA_001672995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/995/GCA_001672995.1_ASM167299v1	-	1482292.6
Campylobacter sp. RM8964	1660074	PRJNA284991	284991	Proteobacteria	delta/epsilon subdivisions	1.75429	32.0516	chromosome:NZ_CP018791.1/CP018791.1; plasmid pVIC8964:NZ_CP018792.1/CP018792.1	-	2	1808	1737	5/15/17	5/23/17	Complete Genome	"USDA, ARS, WRRC"	SAMN03737996	GCA_002139895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/139/895/GCA_002139895.1_ASM213989v1	28854596	RM8964
Staphylococcus sp. HMSC077H01	1715206	PRJNA296335	296335	Terrabacteria group	Firmicutes	2.70148	31.9	-	LTOE01	197	2733	2490	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498663	GCA_001837995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/837/995/GCA_001837995.1_ASM183799v1	-	HMSC077H01
Clostridium sp. CAG:768	1262838	PRJEB1000	206803	Terrabacteria group	Firmicutes	1.95292	30.5	-	CBIZ01	18	2035	1994	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138756	GCA_000437435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/435/GCA_000437435.1_MGS768	-	-
Acinetobacter sp. ANC 4204	1977884	PRJNA380882	380882	Proteobacteria	Gammaproteobacteria	3.89558	40.8	-	NEFZ01	19	3781	3606	5/15/17	5/23/17	Contig	National Institute of Public Health	SAMN06641972	GCA_002135205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/205/GCA_002135205.1_ASM213520v1	-	ANC 4204
Bacillus sp. P14-1	1866317	PRJNA326289	326289	Terrabacteria group	Firmicutes	5.37634	35.2	-	MAOH01	93	5715	5452	11/18/16	4/16/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05231661	GCA_001884215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/215/GCA_001884215.1_ASM188421v1	-	P14-1
Streptomyces sp. NRRL WC-3744	1463935	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.96233	71.9	-	JOCJ01	221	9037	8390	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645416	GCA_000717895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/895/GCA_000717895.1_ASM71789v1	-	NRRL WC-3744
Pseudomonas sp. CMAA1215	1387231	PRJNA215329	215329	Proteobacteria	Gammaproteobacteria	6.65824	63.8	-	AVOY01	224	6279	5303	10/18/13	4/21/17	Contig	Embrapa	SAMN02318190	GCA_000474765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/765/GCA_000474765.1_CMAA1215_1.0	24285649	CMAA1215
Enterobacter hormaechei subsp. oharae	301102	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.6987	55.5	-	JUNO01	140	4501	4352	7/10/15	3/26/17	Contig	University of Washington	SAMN03198137	GCA_001075365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/365/GCA_001075365.1_ASM107536v1	26230489	921_ECLO
Acinetobacter pittii	48296	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.72958	39.1	-	LLHJ01	2637	4031	3867	10/27/15	10/27/15	Contig	Northwestern University Feinberg School of Medicine	SAMN04145728	GCA_001415685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/685/GCA_001415685.1_ASM141568v1	-	ABBL111
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.41006	67.1	-	LPFD01	164	6758	6340	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449477	GCA_001529705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/705/GCA_001529705.1_ASM152970v1	-	MSMB1345WGS
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.48032	61.3	-	DGDB01	50	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454026	GCA_002385235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/235/GCA_002385235.1_ASM238523v1	28894102	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.30285	64.1	-	FRYW01	26	5387	5202	12/14/16	3/21/17	Contig	SC	SAMEA2070834	GCA_900130595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/595/GCA_900130595.1_10665_3_10	-	180
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.47444	57	-	NHTV01	30	4332	4143	6/5/17	6/7/17	Scaffold	FDA/CFSAN	SAMN07163053	GCA_002166945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/945/GCA_002166945.1_ASM216694v1	-	H169-1-AC
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.96099	55.1	-	JYLQ01	42	4928	4675	3/13/15	3/25/17	Scaffold	University of Minnesota	SAMN03333141	GCA_000952515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/515/GCA_000952515.1_ASM95251v1	26438492	MNCRE42
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.50866	32.7	-	CUCN01	89	2485	2365	3/31/15	3/26/17	Scaffold	SC	SAMEA1035082	GCA_001236245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/245/GCA_001236245.1_7067_4_31	-	25-60
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.73935	31.4	-	LBES01	30	1800	1701	10/27/15	3/18/17	Contig	FDA	SAMN03344546	GCA_001417085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/085/GCA_001417085.1_ASM141708v1	-	CVM N40944
Lactobacillus plantarum	1590	PRJNA283610	283610	Terrabacteria group	Firmicutes	3.31231	44.4	-	LEBE01	70	3254	3088	12/3/16	3/28/17	Contig	"Faculty of Agro-industry, Prince of Songkla University, wageningen university"	SAMN03654504	GCA_001888565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/565/GCA_001888565.1_ASM188856v1	-	I08
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.16234	60.1	-	FCIA01	20	4860	4698	1/21/16	3/27/17	Scaffold	SC	SAMEA2273947	GCA_001536985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/985/GCA_001536985.1_12082_2_79	-	2880STDY5682874
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.78385	47.2	-	CTRB01	77	4542	4339	3/26/15	3/26/17	Scaffold	SC	SAMEA980156	GCA_001221145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/145/GCA_001221145.1_4976_2_10	-	YE69/03
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.34083	53.5	-	LSWL01	65	2253	2047	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496987	GCA_002203515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/515/GCA_002203515.1_S69	-	2926
Staphylococcus epidermidis ATCC 12228	176280	PRJNA279	279	Terrabacteria group	Firmicutes	2.56461	32.0512	chromosome:NC_004461.1/AE015929.1; plasmid pSE-12228-01:NC_005008.1/AE015930.1; plasmid pSE-12228-02:NC_005007.1/AE015931.1; plasmid pSE-12228-03:NC_005006.1/AE015932.1; plasmid pSE-12228-04:NC_005005.1/AE015933.1; plasmid pSE-12228-05:NC_005004.1/AE015934.1; plasmid pSE-12228-06:NC_005003.1/AE015935.1	-	7	2558	2482	12/20/02	8/3/16	Complete Genome	"Chinese National HGC, Shanghai"	SAMN02603126	GCA_000007645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/645/GCA_000007645.1_ASM764v1	12950922	ATCC 12228
Brucella melitensis	29459	PRJNA398456	398456	Proteobacteria	Alphaproteobacteria	3.28609	57.2	-	NQVF01	50	3362	2910	8/30/17	8/30/17	Contig	Stavropol Plague Control Reseach Institute	SAMN07510711	GCA_002278675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/675/GCA_002278675.1_ASM227867v1	-	I-194
Stenotrophomonas maltophilia	40324	PRJNA283951	283951	Proteobacteria	Gammaproteobacteria	3.66554	67.2	-	LDAV01	529	3566	3250	6/5/15	12/23/15	Contig	Aljouf university	SAMN03658153	GCA_001020915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/915/GCA_001020915.1_ASM102091v1	26697323	SAM8
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12522	41.2	-	CWBE01	76	2061	1876	6/23/15	3/26/17	Contig	SC	SAMEA1032927	GCA_001177805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/805/GCA_001177805.1_6903_4_60	-	EQUI0109
Enterococcus faecium EnGen0041	1138923	PRJNA82497	82497	Terrabacteria group	Firmicutes	2.79778	38.2	-	AHXY01	31	2826	2660	5/3/13	4/10/17	Scaffold	Broad Institute	SAMN00779838	GCA_000390485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/485/GCA_000390485.1_Ente_faec_E2966_V1	-	E2966
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.15112	52.4	-	CQKF01	77	2520	2191	3/23/15	4/11/17	Contig	SC	SAMEA1677345	GCA_001132185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/185/GCA_001132185.1_8727_5_89	-	GCGS239
Streptococcus mutans NCTC 11060	1257042	PRJNA179257	179257	Terrabacteria group	Firmicutes	2.02131	37	-	AOCC01	36	2033	1881	3/21/13	3/23/17	Contig	Institute of Bioprocess and Biosystems Engineering	SAMN02469960	GCA_000347895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/895/GCA_000347895.1_NCTC11060_V1	23805886	NCTC 11060
Enterococcus faecalis EnGen0102	1157371	PRJNA88243	88243	Terrabacteria group	Firmicutes	2.90492	37.6	-	AISE01	9	2929	2786	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808936	GCA_000391605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/605/GCA_000391605.1_Ente_faec_UAA902_V1	-	UAA902
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	4.30563	28	-	LFPT01	280	4142	3858	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779966	GCA_001574015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/015/GCA_001574015.1_ASM157401v1	26939550	SU1275
Klebsiella pneumoniae	573	PRJNA288422	288422	Proteobacteria	Gammaproteobacteria	5.49187	57.4	chromosome:NZ_CP012043.1/CP012043.1	-	1	5443	5198	12/9/15	2/21/17	Chromosome	DR MGR Educational and Research Institute	SAMN03780451	GCA_001463165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/165/GCA_001463165.1_ASM146316v1	26872343	U25
Bacillus subtilis	1423	PRJNA353160	353160	Terrabacteria group	Firmicutes	4.26609	43.1	-	MQSR01	244	4530	4253	12/4/16	3/28/17	Scaffold	Fatima Jinnah Women University	SAMN06011219	GCA_001888825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/825/GCA_001888825.1_ASM188882v1	-	MB415
Vibrio parahaemolyticus S131	1394665	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.1323	45.1	-	AWIV01	434	4878	4693	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338979	GCA_000489835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/835/GCA_000489835.1_S131	-	S131
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.99222	37.7	-	MLOX01	503	2055	1773	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297115	GCA_001869205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/205/GCA_001869205.1_ASM186920v1	27118061	AWRIB816
Brucella abortus I103_(UK3/01)	1160190	PRJNA173612	173612	Proteobacteria	Alphaproteobacteria	3.28624	57.2	-	ASGX01	6	3375	3152	5/16/13	3/24/17	Contig	Broad Institute	SAMN00811183	GCA_000399725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/725/GCA_000399725.1_Bruc_abor_I103_UK3_01_V1	-	I103_(UK3/01)
Francisella tularensis	263	PRJNA253675	253675	Proteobacteria	Gammaproteobacteria	1.86167	32.5	-	JPPL01	120	1966	1577	2/25/16	4/5/17	Scaffold	Swedish Defence Research Agency	SAMN02886895	GCA_001574855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/855/GCA_001574855.1_ASM157485v1	-	FDC200
Clostridioides difficile DA00193	1151340	PRJNA85855	85855	Terrabacteria group	Firmicutes	3.96933	28.3	-	AVJO01	60	3663	3511	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766655	GCA_000450325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/325/GCA_000450325.2_ASM45032v2	-	DA00193
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	3.96636	47.6	-	JSTF01	97	3713	3513	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104883	GCA_000788675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/675/GCA_000788675.1_ASM78867v1	25538191	2012Env-32
Bacillus thuringiensis serovar jinghongiensis	180844	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.23428	34.7	-	NFCP01	67	6562	6086	5/17/17	6/15/17	Scaffold	Huazhong Agricultural University	SAMN05934503	GCA_002146445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/445/GCA_002146445.1_ASM214644v1	-	BGSC 4AR1
Chlamydia trachomatis	813	PRJEB2035	203744	PVC group	Chlamydiae	1.50109	41	-	CVOE01	583	1354	1317	4/22/15	6/14/15	Scaffold	SC	SAMEA1483348	GCA_001398355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/355/GCA_001398355.1_8036_1_19	-	H31IMS
Burkholderia pseudomallei MSHR3458	1437003	PRJNA231855	231855	Proteobacteria	Betaproteobacteria	7.1258	68.2	-	JQOB01	2	7345	6782	11/11/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN03010152	GCA_000774705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/705/GCA_000774705.1_BPV	25676747	MSHR3458
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.65908	67.1	-	MURU01	130	7390	6892	2/10/17	4/2/17	Contig	University of British Columbia	SAMN05001858	GCA_001993155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/155/GCA_001993155.1_ASM199315v1	-	VC7232
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.67732	50.7	-	FTUF01	377	5191	4445	1/28/17	3/2/17	Contig	SC	SAMEA2054478	GCA_900158035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/035/GCA_900158035.1_9803_4_2	-	2090STDY5461820
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.44562	38.3	-	FJGT01	26	3157	3043	2/20/16	3/27/17	Contig	SC	SAMEA2077529	GCA_900048945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/945/GCA_900048945.1_10625_2_25	-	2532STDY5467498
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.19701	58.5	-	MTHJ01	325	5985	5356	4/28/17	6/9/17	Contig	Massey University	SAMN06197048	GCA_002174905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/905/GCA_002174905.1_ASM217490v1	28369338	C10
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.14662	41.1	-	CEDC01	115	2111	2000	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233883	GCA_000938075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/075/GCA_000938075.1_Velvet_assembly	-	LS0C
Streptococcus agalactiae GB00986	1154967	PRJNA86607	86607	Terrabacteria group	Firmicutes	1.96438	35.2	-	ALVA01	107	2049	1902	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991439	GCA_000289715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/715/GCA_000289715.1_ASM28971v1	-	GB00986
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	3.80183	39	-	JSDG01	77	3685	3479	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068251	GCA_000805135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/135/GCA_000805135.1_ASM80513v1	25487793	2011TJAB1
Pseudomonas aeruginosa BL24	1402565	PRJNA219927	219927	Proteobacteria	Gammaproteobacteria	6.95841	66	-	AXPC01	8	6575	6372	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360737	GCA_000480665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/665/GCA_000480665.1_Pseu_aeru_BL24_V1	-	BL24
Shigella flexneri 2005184	1434172	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.48426	50.4	-	AZPY01	316	5011	4061	1/29/14	8/4/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437407	GCA_000566385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/385/GCA_000566385.1_ASM56638v1	-	2005184
Bacillus anthracis	1392	PRJNA264742	264742	Terrabacteria group	Firmicutes	5.43321	35.1	-	JTAE01	54	6014	5694	11/14/14	3/25/17	Scaffold	Georgia Institute of Technology	SAMN03165129	GCA_000783195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/195/GCA_000783195.1_ASM78319v1	-	2000032979
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.56459	34.9	-	JQPN01	313	4143	3662	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949543	GCA_001567945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/945/GCA_001567945.1_ASM156794v1	26833181	56630
Streptococcus pyogenes ABC020056064	1439261	PRJNA233068	233068	Terrabacteria group	Firmicutes	1.85902	38.5	-	JJID01	10	1932	1806	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567417	GCA_000631245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/245/GCA_000631245.1_Stre_pyog_ABC020056064_V1	-	ABC020056064
Neisseria meningitidis 92045	1069618	PRJNA71011	71011	Proteobacteria	Betaproteobacteria	2.22392	51.5	-	ALXW01	25	2595	2199	8/27/12	3/21/17	Contig	Institute for Genome Sciences	SAMN00849773	GCA_000293445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/445/GCA_000293445.1_ASM29344v1	-	92045
Helicobacter pylori GAM260Bi	1159045	PRJNA89261	89261	Proteobacteria	delta/epsilon subdivisions	1.66658	39.2	-	APDU01	54	1652	1502	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436851	GCA_000345425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/425/GCA_000345425.2_ASM34542v2	-	GAM260Bi
Streptococcus pneumoniae GA47439	760860	PRJNA48913	48913	Terrabacteria group	Firmicutes	2.0198	39.8	-	AGPV01	11	2230	1966	10/25/11	3/8/17	Contig	Institute for Genome Sciences	SAMN00792666	GCA_000233005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/005/GCA_000233005.2_ASM23300v2	-	GA47439
Staphylococcus epidermidis	1282	PRJNA392321	392321	Terrabacteria group	Firmicutes	2.57037	32.0347	chromosome:NZ_CP022247.1/CP022247.1; plasmid pAMT1:NZ_CP022249.1/CP022249.1; plasmid pAMT2:NZ_CP022250.1/CP022250.1; plasmid pAMT3:NZ_CP022251.1/CP022251.1; plasmid pAMT4:NZ_CP022252.1/CP022252.1; plasmid pAMT5:NZ_CP022248.1/CP022248.1	-	6	2545	2378	7/6/17	7/8/17	Complete Genome	University of New Hampshire-Manchester	SAMN07291625	GCA_002215535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/535/GCA_002215535.1_ASM221553v1	-	ATCC 12228
Mycobacterium tuberculosis PanR0307	1346784	PRJNA208577	208577	Terrabacteria group	Actinobacteria	4.40399	65.4997	chromosome:NZ_CM002077.1/CM002077.1	ATEP01	1	4303	4057	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471080	GCA_000443835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/835/GCA_000443835.1_fedora0307c_IS	23884993	PanR0307
Haemophilus influenzae PittHH	374932	PRJNA16403	16403	Proteobacteria	Gammaproteobacteria	1.83735	38	-	AAZH01	59	2020	1977	4/13/07	11/6/13	Scaffold	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393740	GCA_000169815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/815/GCA_000169815.1_ASM16981v1	17550610	PittHH
Mycobacterium avium	1764	PRJNA315990	315990	Terrabacteria group	Actinobacteria	5.21347	69.2	-	NSFI01	63	4943	4725	9/12/17	9/14/17	Contig	University of Michigan Medical School	SAMN07528782	GCA_002292785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/785/GCA_002292785.1_ASM229278v1	-	FLAC0130
Bacillus cereus K-5975c	1053217	PRJNA70401	70401	Terrabacteria group	Firmicutes	6.31975	34.9	-	AHEL01	11	6602	6122	5/16/13	3/24/17	Scaffold	Broad Institute	SAMN02596849	GCA_000399185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/185/GCA_000399185.1_Baci_cere_K-5975c_V1	-	K-5975c
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.46932	31.9	-	JUNR01	203	2384	2304	7/10/15	3/26/17	Contig	University of Washington	SAMN03198136	GCA_001075685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/685/GCA_001075685.1_ASM107568v1	26230489	920_SEPI
Listeria monocytogenes serotype 1/2a str. 01-6771	1385999	PRJNA215184	215184	Terrabacteria group	Firmicutes	2.93018	37.9	chromosome:CP008703.1	-	1	-	-	8/2/17	8/2/17	Chromosome	Public Health Agency of Canada	SAMN02725199	GCA_002240245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/245/GCA_002240245.1_ASM224024v1	-	Jan-71
Yersinia pestis PY-76	992169	PRJNA64365	64365	Proteobacteria	Gammaproteobacteria	4.49899	47.5	-	AKTC01	462	4390	4077	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141490	GCA_000269025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/025/GCA_000269025.1_ASM26902v1	-	PY-76
Campylobacter jejuni Cj5	1367443	PRJNA212374	212374	Proteobacteria	delta/epsilon subdivisions	1.6328	30.3	-	AUUK01	24	1708	1584	5/7/14	3/16/17	Scaffold	University of Exeter	SAMN02744564	GCA_000686325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/325/GCA_000686325.1_Assembly_1	24856088	Cj5
Staphylococcus epidermidis	1282	PRJNA244351	244351	Terrabacteria group	Firmicutes	2.53831	32.0287	chromosome:NZ_CP009046.1/CP009046.1; plasmid unnamed:NZ_CP009047.1/CP009047.1	-	2	2504	2311	9/29/14	3/24/17	Complete Genome	Los Alamos National Laboratory	SAMN02928813	GCA_000759555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/555/GCA_000759555.1_ASM75955v1	25377697	SEI
Clostridium kluyveri NBRC 12016	583346	PRJDA33271	33271	Terrabacteria group	Firmicutes	3.9553	32.0209	chromosome:NC_011837.1/AP009049.1; plasmid pCKL1:NC_011836.1/AP009050.1	-	2	3872	3709	1/6/09	4/6/17	Complete Genome	"Research Institute of Innovative Technology for the Earth (RITE), Microbiology research group"	SAMD00060959	GCA_000010265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/265/GCA_000010265.1_ASM1026v1	-	NBRC 12016
Clostridium kluyveri DSM 555	431943	PRJNA19065	19065	Terrabacteria group	Firmicutes	4.0238	32.0206	chromosome:NC_009706.1/CP000673.1; plasmid pCKL555A:NC_009466.1/CP000674.1	-	2	3968	3804	7/19/07	4/6/17	Complete Genome	Gottingen Genomics Laboratory G2L	SAMN02603294	GCA_000016505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/505/GCA_000016505.1_ASM1650v1	18218779	DSM 555
Cellulophaga lytica	979	PRJNA317518	317518	FCB group	Bacteroidetes/Chlorobi group	3.95296	32	chromosome:NZ_CP015172.1/CP015172.1	-	1	3461	3385	1/10/17	4/16/17	Complete Genome	Dong-A University	SAMN04620658	GCA_001941605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/605/GCA_001941605.1_ASM194160v1	-	DAU203
Campylobacter jejuni Cj1	1365657	PRJNA212378	212378	Proteobacteria	delta/epsilon subdivisions	1.75363	30.2	-	AUUL01	44	1804	1669	5/7/14	3/16/17	Scaffold	University of Exeter	SAMN02744557	GCA_000686345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/345/GCA_000686345.1_Assembly_1	24856088	Cj1
Yersinia pestis PY-89	992171	PRJNA64369	64369	Proteobacteria	Gammaproteobacteria	4.67745	47.5	-	AKTE01	703	4588	4209	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141492	GCA_000269045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/045/GCA_000269045.1_ASM26904v1	-	PY-89
Listeria monocytogenes serotype 1/2a str. 03-5473	1386000	PRJNA215185	215185	Terrabacteria group	Firmicutes	2.9743	37.9	chromosome:CP008773.1	-	1	-	-	8/2/17	8/2/17	Chromosome	Public Health Agency of Canada	SAMN02725200	GCA_002240265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/265/GCA_002240265.1_ASM224026v1	-	Mar-73
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.6072	31.9	-	JULX01	122	2566	2461	7/10/15	3/26/17	Contig	University of Washington	SAMN03198181	GCA_001075835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/835/GCA_001075835.1_ASM107583v1	26230489	961_SEPI
Bacillus cereus IS845/00	1053214	PRJNA70393	70393	Terrabacteria group	Firmicutes	5.87634	35.4	-	AHEI01	14	6255	5922	5/16/13	4/10/17	Scaffold	Broad Institute	SAMN02596846	GCA_000399205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/205/GCA_000399205.1_Baci_cere_IS845_00_V1	-	IS845/00
Mycobacterium avium subsp. hominissuis	439334	PRJNA344398	344398	Terrabacteria group	Actinobacteria	5.26663	69	-	MKCW01	331	5076	4697	9/13/17	9/15/17	Contig	Kobe Institute of Health	SAMN05821953	GCA_002300575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/575/GCA_002300575.1_ASM230057v1	28957464	OCU404
Haemophilus influenzae HK1212	456482	PRJNA20115	20115	Proteobacteria	Gammaproteobacteria	0.859497	39.9	-	ABFC01	1262	2049	2049	12/8/09	12/5/13	Contig	J. Craig Venter Institute	SAMN02436241	GCA_000171475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/475/GCA_000171475.1_ASM17147v1	20654709	HK1212
Mycobacterium tuberculosis PanR0306	1346785	PRJNA208576	208576	Terrabacteria group	Actinobacteria	4.40298	65.2487	chromosome:NZ_CM002079.1/CM002079.1	ATEQ01	1	4316	4033	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471048	GCA_000443855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/855/GCA_000443855.1_fedora0306b_IS	23884993	PanR0306
Sulfurihydrogenibium sp. YO3AOP1	436114	PRJNA18889	18889	Aquificae	Aquificae	1.83844	32	chromosome:NC_010730.1/CP001080.1	-	1	1829	1712	5/21/08	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598418	GCA_000020325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/325/GCA_000020325.1_ASM2032v1	-	YO3AOP1
Streptococcus pneumoniae GA47688	760844	PRJNA48879	48879	Terrabacteria group	Firmicutes	2.08076	39.9	-	AGPW01	15	2280	1995	10/25/11	3/9/17	Contig	Institute for Genome Sciences	SAMN00792674	GCA_000233025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/025/GCA_000233025.2_ASM23302v2	-	GA47688
Helicobacter pylori GAM260BSi	1159046	PRJNA89263	89263	Proteobacteria	delta/epsilon subdivisions	1.57387	39.4	-	APDV01	56	1555	1409	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436852	GCA_000345445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/445/GCA_000345445.2_ASM34544v2	-	GAM260BSi
Neisseria meningitidis NM2657	1069619	PRJNA71013	71013	Proteobacteria	Betaproteobacteria	2.15449	51.7	-	ALXX01	30	2486	2081	8/27/12	3/21/17	Contig	Institute for Genome Sciences	SAMN00849784	GCA_000293465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/465/GCA_000293465.1_ASM29346v1	-	NM2657
Streptococcus pyogenes ABC020055897	1439258	PRJNA233067	233067	Terrabacteria group	Firmicutes	1.90061	38.5	-	JJIE01	7	1997	1879	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567416	GCA_000631265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/265/GCA_000631265.1_Stre_pyog_ABC020055897_V1	-	ABC020055897
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.84557	35.1	-	JQPP01	382	4494	4018	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949545	GCA_001567965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/965/GCA_001567965.1_ASM156796v1	26833181	56635
Bacillus anthracis	1392	PRJNA264742	264742	Terrabacteria group	Firmicutes	5.44396	35.1	-	JTAF01	53	6057	5705	11/14/14	3/25/17	Scaffold	Georgia Institute of Technology	SAMN03165130	GCA_000783215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/215/GCA_000783215.1_ASM78321v1	-	2000032989
Shigella flexneri 2005GS061	1434173	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.4097	50.5	-	AZPZ01	304	4850	4195	1/29/14	2/23/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437408	GCA_000566405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/405/GCA_000566405.1_ASM56640v1	-	2005GS061
Pseudomonas aeruginosa BL23	1402564	PRJNA219926	219926	Proteobacteria	Gammaproteobacteria	7.15249	65.6	-	AXPD01	16	6865	6643	10/24/13	3/16/17	Scaffold	Broad Institute	SAMN02360736	GCA_000480685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/685/GCA_000480685.1_Pseu_aeru_BL23_V1	-	BL23
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	4.04062	39	-	JSDH01	57	3916	3768	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068261	GCA_000805145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/145/GCA_000805145.1_ASM80514v1	25487793	2011LNAB2
Streptococcus agalactiae GB00992	1154968	PRJNA86609	86609	Terrabacteria group	Firmicutes	1.96107	35.2	-	ALVB01	138	2067	1879	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991440	GCA_000289735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/735/GCA_000289735.1_ASM28973v1	-	GB00992
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03706	41.2	-	CEKI01	62	2020	1921	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233980	GCA_000938095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/095/GCA_000938095.1_Velvet_assembly	-	S11G
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.17343	58.6	-	MTHM01	326	5947	5358	4/28/17	6/9/17	Contig	Massey University	SAMN06197051	GCA_002174925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/925/GCA_002174925.1_ASM217492v1	28369338	C13
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.53854	38.3	-	FJID01	57	3234	3089	2/20/16	3/27/17	Contig	SC	SAMEA2077760	GCA_900048955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/955/GCA_900048955.1_10625_3_24	-	2532STDY5467593
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.66095	50.8	-	FTUC01	362	5225	4456	1/28/17	2/26/17	Contig	SC	SAMEA2054477	GCA_900158055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/055/GCA_900158055.1_9803_4_1	-	2090STDY5461819
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.60376	67.1	-	MURX01	173	7352	6832	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001861	GCA_001993175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/175/GCA_001993175.1_ASM199317v1	-	VC7580
Burkholderia pseudomallei MSHR2990	1435996	PRJNA231530	231530	Proteobacteria	Betaproteobacteria	7.52189	67.8	-	JQHV01	4	7788	7156	11/11/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02998029	GCA_000774715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/715/GCA_000774715.1_BPO	25676747	MSHR2990
Chlamydia trachomatis	813	PRJEB2035	203744	PVC group	Chlamydiae	8.86459	44.9	-	CVOA01	7764	7183	7028	4/22/15	6/14/15	Scaffold	SC	SAMEA1483364	GCA_001398375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/375/GCA_001398375.1_8036_1_15	-	H1IMS
Bacillus thuringiensis serovar nigeriensis	180852	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.36747	35.1	-	NFCV01	37	5736	5464	5/17/17	5/24/17	Scaffold	Huazhong Agricultural University	SAMN05934511	GCA_002146465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/465/GCA_002146465.1_ASM214646v1	-	BGSC 4AZ1
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.06053	47.5	-	JSTG01	577	4180	3570	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104880	GCA_000788695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/695/GCA_000788695.1_ASM78869v1	25538191	2012Env-326
Clostridioides difficile DA00195	1151341	PRJNA85857	85857	Terrabacteria group	Firmicutes	4.1087	28.2	-	AVJP01	95	3824	3648	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766662	GCA_000450345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/345/GCA_000450345.2_ASM45034v2	-	DA00195
Francisella tularensis	263	PRJNA253675	253675	Proteobacteria	Gammaproteobacteria	1.81751	32.4	-	JPSV01	94	1905	1562	2/25/16	4/5/17	Scaffold	Swedish Defence Research Agency	SAMN02886899	GCA_001574905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/905/GCA_001574905.1_ASM157490v1	-	FDC204
Brucella abortus 76-1413	1328340	PRJNA200923	200923	Proteobacteria	Alphaproteobacteria	3.28642	57.2	-	ATHF01	4	3376	3154	6/21/13	3/24/17	Contig	Broad Institute	SAMN02092503	GCA_000413495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/495/GCA_000413495.1_Bruc_abor_biovar_1_76-1413_V1	-	76-1413
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.00409	37.8	-	MLPJ01	476	2065	1749	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297128	GCA_001869225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/225/GCA_001869225.1_ASM186922v1	27118061	AWRIB875
Vibrio parahaemolyticus S130	1394664	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.1906	45.3	-	AWIW01	445	4997	4767	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338978	GCA_000489855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/855/GCA_000489855.1_S130	-	S130
Bacillus subtilis	1423	PRJNA371364	371364	Terrabacteria group	Firmicutes	4.04205	43.9	-	MUXL01	21	4161	3959	5/22/17	6/15/17	Scaffold	SULTAN QABOOS UNIVERSITY	SAMN06298242	GCA_002155045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/045/GCA_002155045.1_ASM215504v1	-	AS2
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA324148	324148	Proteobacteria	Gammaproteobacteria	5.8044	56.9869	chromosome:NZ_CP019772.1/CP019772.1; plasmid p1:NZ_CP019773.1/CP019773.1; plasmid p2:NZ_CP019774.1/CP019774.1; plasmid p3:NZ_CP019775.1/CP019775.1; plasmid p4:NZ_CP019776.1/CP019776.1	-	5	5973	5653	2/28/17	3/2/17	Chromosome	Geneva University Hospital	SAMN06335643	GCA_002007665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/665/GCA_002007665.1_ASM200766v1	28143787	KPN_KPC_HUG_07
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.99063	28	-	LFPU01	38	3807	3615	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779967	GCA_001574035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/035/GCA_001574035.1_ASM157403v1	26939550	SU1934
Enterococcus faecalis EnGen0103	1157372	PRJNA88245	88245	Terrabacteria group	Firmicutes	2.91788	37.6	-	AISF01	9	2938	2788	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808937	GCA_000391625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/625/GCA_000391625.1_Ente_faec_UAA903_V1	-	UAA903
Streptococcus mutans DSM 20523	1123310	PRJNA169765	169765	Terrabacteria group	Firmicutes	1.98877	36.7	-	AQWT01	20	2010	1893	4/20/13	3/23/17	Contig	DOE Joint Genome Institute	SAMN02441733	GCA_000375505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/375/505/GCA_000375505.1_ASM37550v1	-	DSM 20523
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.09773	52.6	-	CQMV01	75	2459	2131	3/23/15	4/11/17	Contig	SC	SAMEA1690427	GCA_001132645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/645/GCA_001132645.1_8727_8_2	-	GCGS098
Enterococcus faecium EnGen0131	1157416	PRJNA88259	88259	Terrabacteria group	Firmicutes	2.69217	38.1	-	AISL01	8	2725	2485	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808943	GCA_000391745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/745/GCA_000391745.1_Ente_faec_109_A1_V1	-	109 A1
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15883	41.1	-	CWFN01	71	2102	1928	6/24/15	3/26/17	Contig	SC	SAMEA1032928	GCA_001177825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/825/GCA_001177825.1_6817_1_64	-	EQUI0017
Stenotrophomonas maltophilia	40324	PRJNA299546	299546	Proteobacteria	Gammaproteobacteria	6.64161	65.9	-	LQIG01	1331	6322	5217	1/7/16	1/7/16	Contig	University of Sao Paulo	SAMN04210079	GCA_001506105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/105/GCA_001506105.1_ASM150610v1	-	SM41
Brucella melitensis	29459	PRJNA398460	398460	Proteobacteria	Alphaproteobacteria	3.28768	57.2	-	NQVG01	47	3364	2900	8/30/17	8/30/17	Contig	Stavropol Plague Control Reseach Institute	SAMN07510723	GCA_002278695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/695/GCA_002278695.1_ASM227869v1	-	I-340
Methanocaldococcus sp. FS406-22	644281	PRJNA37943	37943	Euryarchaeota	Methanococci	1.77314	31.9972	chromosome:NC_013887.1/CP001901.1; plasmid pFS01:NC_013888.1/CP001902.1	-	2	1865	1790	2/17/10	4/17/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598520	GCA_000025525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/525/GCA_000025525.1_ASM2552v1	-	FS406-22
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.45561	53.5	-	LSWQ01	36	2370	2193	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497015	GCA_002203535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/535/GCA_002203535.1_S74	-	5052
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.50802	47	-	CTEQ01	91	4248	3999	3/26/15	3/26/17	Scaffold	SC	SAMEA980195	GCA_001221865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/865/GCA_001221865.1_5116_2_11	-	YE04/03
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.20252	59.8	-	FCKA01	19	5018	4850	1/21/16	3/27/17	Scaffold	SC	SAMEA2274023	GCA_001537005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/005/GCA_001537005.1_12082_3_48	-	2880STDY5682951
Lactobacillus plantarum	1590	PRJNA283610	283610	Terrabacteria group	Firmicutes	3.10424	45.1	-	LEBD01	57	3026	2830	12/3/16	3/28/17	Contig	"Faculty of Agro-industry, Prince of Songkla University, wageningen university"	SAMN03654499	GCA_001888575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/575/GCA_001888575.1_ASM188857v1	-	CIF17A2
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.71036	31.4	-	LBER01	27	1768	1675	10/27/15	3/18/17	Contig	FDA	SAMN03344547	GCA_001417105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/105/GCA_001417105.1_ASM141710v1	-	CVM N40946
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.44175	32.7	-	CUGB01	84	2405	2297	3/31/15	4/21/17	Scaffold	SC	SAMEA1035128	GCA_001236685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/685/GCA_001236685.1_7068_7_34	-	114564
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.91753	55.1	-	JYMK01	96	4869	4603	3/13/15	3/25/17	Scaffold	University of Minnesota	SAMN03333161	GCA_000952555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/555/GCA_000952555.1_ASM95255v1	26438492	MNCRE29
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.43358	56.8	-	NHQL01	46	4310	4121	6/19/17	6/22/17	Scaffold	FDA/CFSAN	SAMN04329633	GCA_002198775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/775/GCA_002198775.1_ASM219877v1	-	MOD1-comp11
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15781	64.1	-	FRZA01	24	5167	5024	12/14/16	3/21/17	Contig	SC	SAMEA2071285	GCA_900130605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/605/GCA_900130605.1_10665_3_11	-	181
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.82241	64.2	-	DGJF01	223	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454880	GCA_002386665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/665/GCA_002386665.1_ASM238666v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.64218	67.3	-	LPCX01	86	6940	6626	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449416	GCA_001529725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/725/GCA_001529725.1_ASM152972v1	-	MSMB1058WGS
Acinetobacter pittii	48296	PRJNA322121	322121	Proteobacteria	Gammaproteobacteria	4.93547	41.3	-	MDIK01	1453	4679	4346	8/17/16	8/25/16	Contig	University of Cologne	SAMN05022870	GCA_001706735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/735/GCA_001706735.1_ASM170673v1	-	UKK-0547
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.15224	54.7	-	LPOE01	98	5132	4882	12/21/15	3/27/17	Contig	JCVI	SAMN04252956	GCA_001471215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/215/GCA_001471215.1_SMART_1113.v1	-	SMART_1113
Pseudomonas sp. FH1	1284392	PRJNA186799	186799	Proteobacteria	Gammaproteobacteria	7.06304	60.1	-	AOHM01	146	6690	6448	12/18/13	4/11/17	Contig	University of Exeter	SAMN02597450	GCA_000510895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/510/895/GCA_000510895.2_v1	24286439	FH1
Streptomyces sp. NRRL S-244	1463897	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.09645	72.3	-	JOCX01	73	6343	6105	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645430	GCA_000717915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/915/GCA_000717915.1_ASM71791v1	-	NRRL S-244
Bacillus sp. N35-10-4	1866315	PRJNA326286	326286	Terrabacteria group	Firmicutes	5.48409	35.1	-	MAOF01	108	5843	5560	11/18/16	4/14/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05231553	GCA_001884225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/225/GCA_001884225.1_ASM188422v1	-	N35-10-4
Acinetobacter sp. ANC 4999	1977882	PRJNA380882	380882	Proteobacteria	Gammaproteobacteria	3.12961	38.1	-	NEGB01	19	2951	2785	5/15/17	5/23/17	Contig	National Institute of Public Health	SAMN06641970	GCA_002135235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/235/GCA_002135235.1_ASM213523v1	-	ANC 4999
Clostridium sp. CAG:354	1262799	PRJEB847	206942	Terrabacteria group	Firmicutes	1.66721	27.6	-	CBIG01	76	1739	1707	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138757	GCA_000437455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/455/GCA_000437455.1_MGS354	-	-
Staphylococcus sp. HMSC078A08	1715066	PRJNA296194	296194	Terrabacteria group	Firmicutes	2.43137	32.5	-	LWPX01	285	2355	2215	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498595	GCA_001838025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/025/GCA_001838025.1_ASM183802v1	-	HMSC078A08
Streptococcus sp. HSISM1	1316408	PRJNA196120	196120	Terrabacteria group	Firmicutes	2.33459	41.6051	chromosome:CM002128.1	ASKI01	1	4452	4452	8/19/13	1/8/14	Chromosome	Top Institute Food and Nutrition (TIFN)	SAMN02471220	GCA_000448565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/565/GCA_000448565.1_HSISM1_1.0	24386196	HSISM1
Mycobacterium sp. 1245801.1	1834075	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.76971	67.8	-	LZKY01	427	5591	5056	6/17/16	4/13/17	Contig	JCVI	SAMN04634155	GCA_001673055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/055/GCA_001673055.1_ASM167305v1	-	1245801.1
Prochlorococcus sp. UBA1273	1947243	PRJNA348753	348753	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.65889	53.3	-	DBVD01	210	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06454572	GCA_002308835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/835/GCA_002308835.1_ASM230883v1	28894102	-
Prochlorococcus sp. UBA1528	1947244	PRJNA348753	348753	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.05935	50.5	-	DCQC01	195	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457348	GCA_002323815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/815/GCA_002323815.1_ASM232381v1	28894102	-
Mycobacterium sp. 1423905.2	1856859	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.35189	66.2	-	LZLE01	369	5184	4735	6/17/16	4/13/17	Contig	JCVI	SAMN05202164	GCA_001673155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/155/GCA_001673155.1_ASM167315v1	-	1423905.2
Streptococcus sp. HSISS3	1316412	PRJNA196126	196126	Terrabacteria group	Firmicutes	2.39986	39.4526	chromosome:CM002130.1	ASKH01	1	4460	4460	8/19/13	1/8/14	Chromosome	Top Institute Food and Nutrition (TIFN)	SAMN02471218	GCA_000448605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/605/GCA_000448605.1_HSISS3_1.0	24386196	HSISS3
Staphylococcus sp. HMSC078A03	1715010	PRJNA296521	296521	Terrabacteria group	Firmicutes	2.38126	32.7	-	LTOD01	74	2335	2251	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498671	GCA_001838035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/035/GCA_001838035.1_ASM183803v1	-	HMSC078A03
Clostridium sp. CAG:307	1262795	PRJEB822	206841	Terrabacteria group	Firmicutes	1.84468	29.7	-	CBIO01	102	1674	1656	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138763	GCA_000437575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/575/GCA_000437575.1_MGS307	-	-
Acinetobacter sp. ANC 4218	1977880	PRJNA380882	380882	Proteobacteria	Gammaproteobacteria	3.39055	41.8	-	NEGD01	35	3297	3073	5/15/17	5/23/17	Contig	National Institute of Public Health	SAMN06641968	GCA_002135245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/245/GCA_002135245.1_ASM213524v1	-	ANC 4218
Bacillus sp. NH24A2	1866316	PRJNA326288	326288	Terrabacteria group	Firmicutes	5.45311	35.2	-	MAOI01	144	5794	5365	11/18/16	4/16/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05231634	GCA_001884235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/235/GCA_001884235.1_ASM188423v1	-	NH24A2
Streptomyces sp. NRRL S-241	1463896	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.76848	72.1	-	JOCY01	193	7979	7605	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645431	GCA_000717925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/925/GCA_000717925.1_ASM71792v1	-	NRRL S-241
Pseudomonas sp. FH4	1284393	PRJNA186800	186800	Proteobacteria	Gammaproteobacteria	6.02409	60.1	-	AOHN01	63	5554	5404	12/18/13	4/11/17	Contig	University of Exeter	SAMN02597451	GCA_000510915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/510/915/GCA_000510915.2_v1	24286439	FH4
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.87292	55.4	-	LPOA01	53	4868	4644	12/21/15	3/27/17	Contig	JCVI	SAMN04252960	GCA_001471225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/225/GCA_001471225.1_SMART_1147.v1	-	SMART_1147
Acinetobacter pittii	48296	PRJNA344528	344528	Proteobacteria	Gammaproteobacteria	4.01632	38.7	-	MKHF01	120	3844	2926	2/24/17	2/24/17	Scaffold	Yonsei university college of medicine	SAMN05827444	GCA_002006845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/845/GCA_002006845.1_ASM200684v1	-	YMC2010/8/T346
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.64157	67.4	-	LPDK01	52	6125	5864	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449429	GCA_001529745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/745/GCA_001529745.1_ASM152974v1	-	MSMB1080WGS
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.06999	63.7	-	DGKY01	65	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457837	GCA_002387165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/165/GCA_002387165.1_ASM238716v1	28894102	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.13882	64.1	-	FVBL01	12	5223	5053	3/10/17	3/18/17	Contig	SC	SAMEA2070836	GCA_900130625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/625/GCA_900130625.1_10665_3_16	-	186
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.6033	56.7	-	NHQN01	33	4534	4322	6/19/17	6/22/17	Scaffold	FDA/CFSAN	SAMN07139883	GCA_002199005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/005/GCA_002199005.1_ASM219900v1	-	GK1027
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.55318	55.9	-	JYMM01	79	4440	4255	3/13/15	3/25/17	Scaffold	University of Minnesota	SAMN03333163	GCA_000952575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/575/GCA_000952575.1_ASM95257v1	26438492	MNCRE20
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.39364	32.6	-	CUGS01	44	2374	2218	3/31/15	4/21/17	Scaffold	SC	SAMEA1035088	GCA_001237185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/185/GCA_001237185.1_7068_7_50	-	134634
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.72595	31.4	-	LBEQ01	41	1790	1693	10/27/15	3/18/17	Contig	FDA	SAMN03344548	GCA_001417125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/125/GCA_001417125.1_ASM141712v1	-	CVM N41652
Lactobacillus plantarum	1590	PRJNA283610	283610	Terrabacteria group	Firmicutes	3.10575	45.1	-	LEBC01	59	3027	2829	12/3/16	3/28/17	Contig	"Faculty of Agro-industry, Prince of Songkla University, wageningen university"	SAMN03654500	GCA_001888585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/585/GCA_001888585.1_ASM188858v1	-	CIF17A4
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.2818	59.9	-	FCHC01	28	5020	4856	1/21/16	3/27/17	Scaffold	SC	SAMEA2273919	GCA_001537025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/025/GCA_001537025.1_12082_2_54	-	2880STDY5682846
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.4518	46.9	-	CTRD01	101	4172	3929	3/26/15	3/26/17	Scaffold	SC	SAMEA980185	GCA_001222105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/105/GCA_001222105.1_5116_2_1	-	YE214/02
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.37427	53.4	-	LSWR01	56	2295	2116	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497016	GCA_002203545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/545/GCA_002203545.1_S75	-	5064
Allofrancisella guangzhouensis	594679	PRJNA271279	271279	Proteobacteria	Gammaproteobacteria	1.66153	31.994	chromosome:NZ_CP010427.1/CP010427.1; plasmid unnamed1:NZ_CP010428.1/CP010428.1	-	2	1557	1490	1/6/15	9/21/17	Complete Genome	Swedish Defense Research Agancy	SAMN03273550	GCA_000815225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/225/GCA_000815225.1_ASM81522v1	-	08HL01032
Brucella melitensis	29459	PRJNA398461	398461	Proteobacteria	Alphaproteobacteria	3.2869	57.2	-	NQVH01	51	3363	2971	8/30/17	8/30/17	Contig	Stavropol Plague Control Reseach Institute	SAMN07510738	GCA_002278715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/715/GCA_002278715.1_ASM227871v1	-	I-370
Stenotrophomonas maltophilia	40324	PRJNA299546	299546	Proteobacteria	Gammaproteobacteria	4.70623	66.6	-	LQNW01	1408	4378	3319	1/15/16	1/15/16	Contig	University of Sao Paulo	SAMN04210080	GCA_001516595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/595/GCA_001516595.1_ASM151659v1	-	SM45
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.13284	41.2	-	CVWY01	77	2071	1891	6/23/15	3/26/17	Contig	SC	SAMEA1032931	GCA_001177845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/845/GCA_001177845.1_6817_1_50	-	EQUI0003
Enterococcus faecium EnGen0124	1157418	PRJNA88263	88263	Terrabacteria group	Firmicutes	2.58781	38.3	-	AISN01	6	2612	2388	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808945	GCA_000391785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/785/GCA_000391785.1_Ente_faec_7230532-1_V1	-	7230532-1
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.1282	52.6	-	CQOW01	73	2495	2183	3/22/15	4/11/17	Contig	SC	SAMEA1690507	GCA_001133405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/405/GCA_001133405.1_8727_8_84	-	GCGS180
Streptococcus mutans PKUSS-HG01	1403829	PRJNA219430	219430	Terrabacteria group	Firmicutes	2.00261	36.6	-	AXSW01	12	2012	1901	11/12/13	3/24/17	Contig	"Beijing Institute of Genomics, Chinese Academy of Sciences"	SAMN02469427	GCA_000496535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/535/GCA_000496535.1_Streptococcus_mutans_PKUSS-HG01	24926045	PKUSS-HG01
Enterococcus faecalis EnGen0104	1157373	PRJNA88247	88247	Terrabacteria group	Firmicutes	2.90183	37.6	-	AISG01	8	2926	2790	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808938	GCA_000391645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/645/GCA_000391645.1_Ente_faec_UAA904_V1	-	UAA904
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	4.30676	27.9	-	LFPV01	141	4224	3996	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779982	GCA_001574055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/055/GCA_001574055.1_ASM157405v1	26939550	SU1304
Klebsiella pneumoniae	573	PRJNA391268	391268	Proteobacteria	Gammaproteobacteria	5.74513	56.8391	chromosome:NZ_CP022143.1/CP022143.1; plasmid p704SK6_1:NZ_CP022144.1/CP022144.1; plasmid p704SK6_2:NZ_CP022145.1/CP022145.1; plasmid p704SK6_3:NZ_CP022146.1/CP022146.1; plasmid p704SK6_4:NZ_CP022147.1/CP022147.1	-	5	5833	5525	6/30/17	7/3/17	Chromosome	University of Zurich	SAMN07260304	GCA_002211665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/665/GCA_002211665.1_ASM221166v1	-	-
Bacillus subtilis	1423	PRJNA391893	391893	Terrabacteria group	Firmicutes	4.21671	43.6	-	NKAK01	24	4300	4095	6/29/17	7/1/17	Scaffold	Kazan Federal University	SAMN07277156	GCA_002211235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/235/GCA_002211235.1_ASM221123v1	-	GM2
Vibrio parahaemolyticus S129	1394663	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.04056	45.3	-	AWIX01	659	4821	4529	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338977	GCA_000489875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/875/GCA_000489875.1_S129	-	S129
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.24223	38.1	-	MLPK01	630	2324	1976	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297129	GCA_001869235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/235/GCA_001869235.1_ASM186923v1	27118061	AWRIB879
Brucella abortus 68-3396P	1328339	PRJNA200922	200922	Proteobacteria	Alphaproteobacteria	3.2861	57.2	-	ATHG01	4	3388	3165	6/21/13	3/24/17	Contig	Broad Institute	SAMN02092502	GCA_000413535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/535/GCA_000413535.1_Bruc_abor_biovar_4_68-3396P_V1	-	68-3396P
Francisella tularensis	263	PRJNA253675	253675	Proteobacteria	Gammaproteobacteria	1.81913	32.4	-	JPSW01	99	1909	1559	2/25/16	4/5/17	Scaffold	Swedish Defence Research Agency	SAMN02886900	GCA_001574935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/935/GCA_001574935.1_ASM157493v1	-	FDC205
Clostridioides difficile DA00196	1151342	PRJNA85859	85859	Terrabacteria group	Firmicutes	4.25488	28.8	-	AVJQ01	22	4020	3838	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01978897	GCA_000450365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/365/GCA_000450365.2_ASM45036v2	-	DA00196
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.01261	47.5	-	JSTI01	115	3823	3646	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104877	GCA_000788735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/735/GCA_000788735.1_ASM78873v1	25538191	2012Env-90
Bacillus thuringiensis serovar seoulensis	180887	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.99957	35	-	NFCO01	71	6343	5822	5/17/17	6/16/17	Scaffold	Huazhong Agricultural University	SAMN05934502	GCA_002146525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/525/GCA_002146525.1_ASM214652v1	-	BGSC 4AQ1
Chlamydia trachomatis	813	PRJEB2035	203744	PVC group	Chlamydiae	8.21081	44	-	CVOC01	4065	7464	7321	4/22/15	6/13/15	Scaffold	SC	SAMEA1483369	GCA_001398395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/395/GCA_001398395.1_8036_1_17	-	H27IMS
Burkholderia pseudomallei MSHR1357	1435992	PRJNA231525	231525	Proteobacteria	Betaproteobacteria	7.12924	68.1	-	JQDA01	3	7354	6806	11/11/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02997311	GCA_000774765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/765/GCA_000774765.1_BPK	25676747	MSHR1357
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.89543	67.1	-	MUWX01	171	7632	7093	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001863	GCA_001993185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/185/GCA_001993185.1_ASM199318v1	-	VC7691
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.69985	50.8	-	FTUH01	376	5168	4504	1/28/17	2/26/17	Contig	SC	SAMEA1967175	GCA_900158085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/085/GCA_900158085.1_9803_4_4	-	2090STDY5461822
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54156	38.3	-	FJJD01	63	3238	3092	2/20/16	3/27/17	Contig	SC	SAMEA2077783	GCA_900048965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/965/GCA_900048965.1_10625_2_84	-	2532STDY5467557
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.23479	58.5	-	MTHK01	334	6061	5417	4/28/17	6/9/17	Contig	Massey University	SAMN06197049	GCA_002174935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/935/GCA_002174935.1_ASM217493v1	28369338	C11
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.10787	41.1	-	CEJW01	116	2125	1998	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234004	GCA_000938115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/115/GCA_000938115.1_Velvet_assembly	-	S13E
Streptococcus agalactiae FSL C1-494	1154783	PRJNA86157	86157	Terrabacteria group	Firmicutes	2.21323	35.5	-	ALQD01	92	2296	2083	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993327	GCA_000289755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/755/GCA_000289755.1_ASM28975v1	-	FSL C1-494
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	3.94459	38.9	-	JSDI01	59	3836	3664	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068263	GCA_000805195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/195/GCA_000805195.1_ASM80519v1	25487793	2011LNAB3
Pseudomonas aeruginosa BL22	1402563	PRJNA219925	219925	Proteobacteria	Gammaproteobacteria	6.99722	66	-	AXPE01	12	6637	6416	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360735	GCA_000480705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/705/GCA_000480705.1_Pseu_aeru_BL22_V1	-	BL22
Shigella flexneri Shi06GS02	1434174	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.57377	50.5	-	AZQA01	318	5110	4143	1/29/14	8/4/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437409	GCA_000566425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/425/GCA_000566425.1_ASM56642v1	-	Shi06GS02
Bacillus anthracis	1392	PRJNA264742	264742	Terrabacteria group	Firmicutes	5.49956	35.1	-	JTAG01	63	6080	5744	11/14/14	3/25/17	Scaffold	Georgia Institute of Technology	SAMN03165131	GCA_000783235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/235/GCA_000783235.1_ASM78323v1	-	2002013094
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.81446	35	-	JQPQ01	389	4433	3947	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949546	GCA_001567975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/975/GCA_001567975.1_ASM156797v1	26833181	56638
Streptococcus pyogenes ABC020053240	1439228	PRJNA233065	233065	Terrabacteria group	Firmicutes	1.82049	38.5	-	JJIF01	8	1869	1749	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567414	GCA_000631285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/285/GCA_000631285.1_Stre_pyog_ABC020053240_V1	-	ABC020053240
Neisseria meningitidis NM2795	1069620	PRJNA71015	71015	Proteobacteria	Betaproteobacteria	2.15499	51.9	-	ALXY01	25	2489	2078	8/27/12	3/21/17	Contig	Institute for Genome Sciences	SAMN00849787	GCA_000293625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/625/GCA_000293625.1_ASM29362v1	-	NM2795
Helicobacter pylori GAM263BFi	1159047	PRJNA89265	89265	Proteobacteria	delta/epsilon subdivisions	1.64785	39.2	-	APDW01	48	1617	1456	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436920	GCA_000345465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/465/GCA_000345465.2_ASM34546v2	-	GAM263BFi
Streptococcus pneumoniae GA47976	760850	PRJNA48891	48891	Terrabacteria group	Firmicutes	2.11549	39.7	-	AGPY01	11	2291	1990	10/25/11	3/8/17	Contig	Institute for Genome Sciences	SAMN00792681	GCA_000233065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/065/GCA_000233065.2_ASM23306v2	-	GA47976
Staphylococcus epidermidis	1282	PRJEB13975	321279	Terrabacteria group	Firmicutes	2.84117	31.967	chromosome 1:NZ_LT571449.1/LT571449.1; plasmid 2:NZ_LT571450.1/LT571450.1; plasmid 3:NZ_LT571451.1/LT571451.1	-	3	2855	2699	5/12/16	3/28/17	Complete Genome	UNIVERSITY OF MELBOURNE	SAMEA3982825	GCA_900086615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/615/GCA_900086615.1_BPH0662	-	-
Mycobacterium tuberculosis PanR0304	1346787	PRJNA208574	208574	Terrabacteria group	Actinobacteria	4.39792	65.2486	chromosome:NZ_CM002074.1/CM002074.1	ATES01	1	4309	4015	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471110	GCA_000443875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/875/GCA_000443875.1_fedora0304b_IS	23884993	PanR0304
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.15839	69.2	-	LNAV01	170	4963	4559	3/8/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04208087	GCA_001583545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/545/GCA_001583545.1_ASM158354v1	-	MAH-P-10091-06
Bacillus cereus IS195	1053213	PRJNA70391	70391	Terrabacteria group	Firmicutes	5.89227	35.4	-	AHEH01	13	6255	5930	5/16/13	4/10/17	Scaffold	Broad Institute	SAMN02596845	GCA_000399225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/225/GCA_000399225.1_Baci_cere_IS195_V1	-	IS195
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.68262	31.8	-	JUMX01	115	2664	2565	7/10/15	3/26/17	Contig	University of Washington	SAMN03198155	GCA_001075945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/945/GCA_001075945.1_ASM107594v1	26230489	936_SEPI
Listeria monocytogenes str. Scott A	1027396	PRJNA66415	66415	Terrabacteria group	Firmicutes	3.02182	37.9	chromosome:NZ_CM001159.1/CM001159.1	AFGI01	1	3093	2969	5/5/11	2/26/17	Chromosome	"Institute of Food, Nutrition and Health, ETH Zurich"	SAMN02415240	GCA_000212455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/212/455/GCA_000212455.1_ASM21245v1	21685277	Scott A
Yersinia pestis PY-90	992172	PRJNA64371	64371	Proteobacteria	Gammaproteobacteria	4.67593	47.5	-	AKTF01	512	4529	4220	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141493	GCA_000269065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/065/GCA_000269065.1_ASM26906v1	-	PY-90
Campylobacter jejuni Cj2	1365659	PRJNA212379	212379	Proteobacteria	delta/epsilon subdivisions	1.68089	30.4	-	AUUM01	31	1751	1652	5/7/14	3/16/17	Scaffold	University of Exeter	SAMN02744566	GCA_000686365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/365/GCA_000686365.1_Assembly_1	24856088	Cj2
Staphylococcus epidermidis PM221	1449752	PRJEB5186	258266	Terrabacteria group	Firmicutes	2.59751	31.934	chromosome I:NZ_HG813242.1/HG813242.1; plasmid II:NZ_HG813243.1/HG813243.1; plasmid III:NZ_HG813244.1/HG813244.1; plasmid IV:NZ_HG813245.1/HG813245.1; plasmid V:NZ_HG813246.1/HG813246.1	-	5	2589	2399	8/14/14	3/24/17	Complete Genome	UNIVERSITY OF HELSINKI	SAMEA3139103	GCA_000751035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/035/GCA_000751035.1_PM221	-	PM221
Acholeplasma laidlawii PG-8A	441768	PRJNA19259	19259	Terrabacteria group	Tenericutes	1.49699	31.9	chromosome:NC_010163.1/CP000896.1	-	1	1427	1374	12/7/07	4/6/17	Complete Genome	Research Institute for Physico-Chemical Medicine	SAMN02603756	GCA_000018785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/785/GCA_000018785.1_ASM1878v1	21784942	PG-8A
Methanobrevibacter millerae	230361	PRJNA49589	49589	Euryarchaeota	Methanobacteria	2.54354	31.8	chromosome:NZ_CP011266.1/CP011266.1	-	1	2318	2209	12/22/15	4/16/17	Complete Genome	PGgRc	SAMN03438115	GCA_001477655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/655/GCA_001477655.1_ASM147765v1	-	SM9
Algibacter alginicilyticus	1736674	PRJNA298144	298144	FCB group	Bacteroidetes/Chlorobi group	3.99477	31.8	chromosome:NZ_CP012898.1/CP012898.1	-	1	3351	3273	10/13/15	5/31/17	Complete Genome	Zhejiang University	SAMN04156175	GCA_001310225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/225/GCA_001310225.1_ASM131022v1	-	HZ22
Campylobacter jejuni Cj3	1365660	PRJNA212384	212384	Proteobacteria	delta/epsilon subdivisions	1.73416	30.4	-	AUUN01	37	1816	1694	5/7/14	3/16/17	Scaffold	University of Exeter	SAMN02744559	GCA_000686385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/385/GCA_000686385.1_Assembly_1	24856088	Cj3
Yersinia pestis PY-91	992173	PRJNA64373	64373	Proteobacteria	Gammaproteobacteria	4.67513	47.5	-	AKTG01	543	4553	4229	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141494	GCA_000269085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/085/GCA_000269085.1_ASM26908v1	-	PY-91
Listeria monocytogenes FSL J1-208	393119	PRJNA53559	53559	Terrabacteria group	Firmicutes	2.85435	37.8909	chromosome:NZ_CM001469.1/CM001469.1; plasmid pLMIV:NZ_CM001470.1/CM001470.1	AEIS01	2	2861	2775	2/28/12	2/26/17	Chromosome	"Food Safety Laboratory, Cornell University"	SAMN01121066	GCA_000250715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/715/GCA_000250715.1_ASM25071v1	22247147	FSL J1-208
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.30912	32.1	-	JULG01	98	2232	2154	7/10/15	3/26/17	Contig	University of Washington	SAMN03198198	GCA_001076045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/045/GCA_001076045.1_ASM107604v1	26230489	978_SEPI
Bacillus cereus MC118	1053218	PRJNA70403	70403	Terrabacteria group	Firmicutes	5.60841	35.3	-	AHEM01	179	5846	5405	5/16/13	3/24/17	Scaffold	Broad Institute	SAMN02596850	GCA_000399245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/245/GCA_000399245.1_Baci_cere_MC118_V1	-	MC118
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.34201	69.1	-	LNBF01	187	5119	4724	4/4/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04226693	GCA_001609865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/865/GCA_001609865.1_ASM160986v1	-	MAH-P-9060-06
Mycobacterium tuberculosis PanR0301	1346788	PRJNA208573	208573	Terrabacteria group	Actinobacteria	4.39554	65.3994	chromosome:NZ_CM002075.1/CM002075.1	ATET01	1	4313	4083	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471049	GCA_000443895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/895/GCA_000443895.1_fedora0301c_IS	23884993	PanR0301
Campylobacter hominis ATCC BAA-381	360107	PRJNA20083	20083	Proteobacteria	delta/epsilon subdivisions	1.71495	31.7051	chromosome:NC_009714.1/CP000776.1; plasmid pCH4:NC_009713.1/CP000775.1	-	2	1672	1578	7/25/07	4/17/17	Complete Genome	J. Craig Venter Institute	SAMN02603439	GCA_000017585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/585/GCA_000017585.1_ASM1758v1	-	ATCC BAA-381
Streptococcus pneumoniae GA52306	760856	PRJNA48903	48903	Terrabacteria group	Firmicutes	2.13097	39.8	-	AGPZ01	19	2335	2029	10/25/11	3/9/17	Contig	Institute for Genome Sciences	SAMN00792686	GCA_000233085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/085/GCA_000233085.2_ASM23308v2	-	GA52306
Helicobacter pylori GAM264Ai	1159048	PRJNA89267	89267	Proteobacteria	delta/epsilon subdivisions	1.60342	39.4	-	APDX01	42	1560	1392	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436853	GCA_000345485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/485/GCA_000345485.2_ASM34548v2	-	GAM264Ai
Neisseria meningitidis NM3081	1069621	PRJNA71017	71017	Proteobacteria	Betaproteobacteria	2.34663	51.3	-	ALXZ01	57	2752	2280	8/27/12	4/11/17	Contig	Institute for Genome Sciences	SAMN00849790	GCA_000293645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/645/GCA_000293645.1_ASM29364v1	-	NM3081
Streptococcus pyogenes ABC020052519	1439217	PRJNA233064	233064	Terrabacteria group	Firmicutes	1.84923	38.5	-	JJIG01	7	1924	1799	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567413	GCA_000631305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/305/GCA_000631305.1_Stre_pyog_ABC020052519_V1	-	ABC020052519
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.91502	35	-	JQPS01	453	4582	4083	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949548	GCA_001567985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/567/985/GCA_001567985.1_ASM156798v1	26833181	56642
Bacillus anthracis	1392	PRJNA281298	281298	Terrabacteria group	Firmicutes	5.46114	35.0654	plasmid unnamed 1:NZ_CM004501.1/CM004501.1	LBCA01	38	6133	5718	6/28/16	4/10/17	Scaffold	University of Oslo	SAMN03486971	GCA_001677295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/295/GCA_001677295.1_ASM167729v1	-	K2
Shigella flexneri Shi06HN159	1434175	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.45865	50.4	-	AZQB01	308	4966	4174	1/29/14	3/5/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437410	GCA_000566445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/445/GCA_000566445.1_ASM56644v1	-	Shi06HN159
Pseudomonas aeruginosa BL21	1402562	PRJNA219924	219924	Proteobacteria	Gammaproteobacteria	6.84127	66.1	-	AXPF01	3	6528	6339	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360734	GCA_000480725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/725/GCA_000480725.1_Pseu_aeru_BL21_V1	-	BL21
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	4.00331	38.9	-	JSDJ01	68	3911	3760	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068267	GCA_000805205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/205/GCA_000805205.1_ASM80520v1	25487793	2011ZJAB2
Streptococcus agalactiae FSL S3-277	1154781	PRJNA86153	86153	Terrabacteria group	Firmicutes	2.32219	36	-	ALQC01	91	2360	2072	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993314	GCA_000289775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/775/GCA_000289775.1_ASM28977v1	-	FSL S3-277
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	1.96936	41.3	-	CEIX01	68	1955	1867	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234001	GCA_000938135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/135/GCA_000938135.1_Velvet_assembly	-	S13B
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.26994	58.5	-	MTHO01	327	6097	5524	4/28/17	6/9/17	Contig	Massey University	SAMN06197053	GCA_002174975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/975/GCA_002174975.1_ASM217497v1	28369338	C15
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.25962	38.2	-	FJDL01	19	2961	2865	2/20/16	3/27/17	Contig	SC	SAMEA2058474	GCA_900049245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/245/GCA_900049245.1_10771_1_79	-	2531STDY5467360
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.61596	50.8	-	FTUK01	380	5193	4419	1/28/17	2/26/17	Contig	SC	SAMEA2054479	GCA_900158095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/095/GCA_900158095.1_9803_4_5	-	2090STDY5461823
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.19564	67.1	-	MUSE01	119	7745	7291	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001870	GCA_001993215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/215/GCA_001993215.1_ASM199321v1	-	VC6916
Burkholderia pseudomallei MSHR733	1436999	PRJNA231859	231859	Proteobacteria	Betaproteobacteria	7.37549	68	-	JQEE01	2	7651	7035	11/11/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02998020	GCA_000774785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/785/GCA_000774785.1_BPY	25676747	MSHR733
Chlamydia trachomatis	813	PRJEB2035	203744	PVC group	Chlamydiae	2.75692	38.9	-	CVOD01	1364	2532	2491	4/22/15	6/13/15	Scaffold	SC	SAMEA1483370	GCA_001398415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/415/GCA_001398415.1_8036_1_18	-	H29IMS
Bacillus thuringiensis serovar japonensis	128936	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.21701	34.7	-	NFCQ01	78	6550	6070	5/17/17	6/15/17	Scaffold	Huazhong Agricultural University	SAMN05934505	GCA_002146545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/545/GCA_002146545.1_ASM214654v1	-	BGSC 4AT1
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	3.89327	47.8	-	JSTJ01	140	3644	3429	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104884	GCA_000788755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/755/GCA_000788755.1_ASM78875v1	25538191	2012Env-92
Clostridioides difficile DA00197	1151343	PRJNA85861	85861	Terrabacteria group	Firmicutes	4.12253	28.3	-	AVJR01	18	3799	3617	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01978898	GCA_000450385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/385/GCA_000450385.2_ASM45038v2	-	DA00197
Francisella tularensis	263	PRJNA253675	253675	Proteobacteria	Gammaproteobacteria	1.81693	32.4	-	JPPM01	97	1918	1559	2/25/16	4/5/17	Scaffold	Swedish Defence Research Agency	SAMN02886897	GCA_001574945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/945/GCA_001574945.1_ASM157494v1	-	FDC202
Brucella abortus 82-3893	1328343	PRJNA200926	200926	Proteobacteria	Alphaproteobacteria	3.28609	57.2	-	ATHC01	4	3384	3157	6/21/13	3/24/17	Contig	Broad Institute	SAMN02092506	GCA_000413555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/555/GCA_000413555.1_Bruc_abor_biovar_2_82-3893_V1	-	82-3893
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.96917	38	-	MLOW01	287	2079	1823	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297114	GCA_001869245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/245/GCA_001869245.1_ASM186924v1	27118061	AWRIB794
Vibrio parahaemolyticus S128	1394662	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	4.9492	45.4	-	AWIY01	384	4728	4517	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338976	GCA_000489895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/895/GCA_000489895.1_S128	-	S128
Bacillus subtilis	1423	PRJNA392213	392213	Terrabacteria group	Firmicutes	4.27128	43.3	-	NKJH01	19	4506	4364	8/29/17	8/30/17	Scaffold	Kazan Federal University	SAMN07285925	GCA_002277775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/775/GCA_002277775.1_ASM227777v1	-	GM5
Klebsiella pneumoniae	573	PRJEB12753	321997	Proteobacteria	Gammaproteobacteria	5.87029	56.958	chromosome 1:NZ_LT216436.1/LT216436.1; plasmid KPN207_p1:NZ_LT216437.1/LT216437.1; plasmid KPN207_p2:NZ_LT216438.1/LT216438.1; plasmid KPN207_p3:NZ_LT216439.1/LT216439.1; plasmid KPN207_p4:NZ_LT216440.1/LT216440.1	-	5	6038	5718	5/16/16	3/18/17	Chromosome	WTSI	SAMEA1920840	GCA_900069965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/069/965/GCA_900069965.1_KPN_RH201207	-	-
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	4.1754	28	-	LFQY01	174	4035	3799	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779968	GCA_001574065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/065/GCA_001574065.1_ASM157406v1	26939550	SU1259
Enterococcus faecalis EnGen0105	1157374	PRJNA88251	88251	Terrabacteria group	Firmicutes	2.90435	37.6	-	AISH01	9	2928	2782	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808939	GCA_000391665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/665/GCA_000391665.1_Ente_faec_UAA905_V1	-	UAA905
Streptococcus mutans PKUSS-LG01	1404260	PRJNA221218	221218	Terrabacteria group	Firmicutes	2.00139	36.7	-	AXSX01	14	2006	1895	11/12/13	3/24/17	Contig	"Institute of Genomics, Chinese Academy of Sciences, Beijing"	SAMN02469428	GCA_000496555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/555/GCA_000496555.1_Streptococcus_mutans_PKUSS-LG01	24926045	PKUSS-LG01
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14921	52.4	-	CQLJ01	73	2518	2198	3/23/15	4/11/17	Contig	SC	SAMEA1690322	GCA_001134525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/525/GCA_001134525.1_8289_2_57	-	GCGS057
Enterococcus faecium EnGen0125	1157419	PRJNA88265	88265	Terrabacteria group	Firmicutes	2.59818	38.2	-	AISO01	9	2625	2394	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808947	GCA_000391805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/805/GCA_000391805.1_Ente_faec_7330381-1_V1	-	7330381-1
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.1575	41.1	-	CWAA01	81	2097	1914	6/23/15	3/26/17	Contig	SC	SAMEA1032932	GCA_001177865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/865/GCA_001177865.1_6903_2_5	-	EQUI0054
Stenotrophomonas maltophilia	40324	PRJNA299546	299546	Proteobacteria	Gammaproteobacteria	4.18591	66.2	-	LQNV01	1406	4050	3062	1/15/16	1/15/16	Contig	University of Sao Paulo	SAMN04210078	GCA_001516605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/605/GCA_001516605.1_ASM151660v1	-	SM17
Brucella melitensis	29459	PRJNA398463	398463	Proteobacteria	Alphaproteobacteria	3.28665	57.2	-	NQVI01	50	3351	2888	8/30/17	8/30/17	Contig	Stavropol Plague Control Reseach Institute	SAMN07510740	GCA_002278735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/735/GCA_002278735.1_ASM227873v1	-	I-308
archaeon GW2011_AR20	1579378	PRJNA268032	268032	unclassified Archaea	unclassified Archaea (miscellaneous)	0.829411	31.7	chromosome:CP010426.1	-	1	1045	1010	1/29/15	9/21/17	Complete Genome	"Banfield Lab, University of California, Berkeley"	SAMN03217314	GCA_000830315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/315/GCA_000830315.1_ASM83031v1	-	-
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.3273	53.5	-	LSWV01	40	2243	2043	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496990	GCA_002203575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/575/GCA_002203575.1_S80	-	4069
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.9431	47.2	-	CTJB01	59	4711	4490	3/26/15	3/26/17	Scaffold	SC	SAMEA980158	GCA_001222265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/265/GCA_001222265.1_4976_3_3	-	YE34/03
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.15697	60	-	FCMH01	14	4901	4752	1/21/16	3/27/17	Scaffold	SC	SAMEA2273986	GCA_001537045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/045/GCA_001537045.1_12082_5_37	-	2880STDY5682914
Lactobacillus plantarum	1590	PRJNA283610	283610	Terrabacteria group	Firmicutes	3.10491	45.1	-	LEBB01	61	3031	2827	12/3/16	3/28/17	Contig	"Faculty of Agro-industry, Prince of Songkla University, wageningen university"	SAMN03654501	GCA_001888595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/595/GCA_001888595.1_ASM188859v1	-	CIF17A5
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.73678	31.3	-	LBEP01	25	1802	1706	10/27/15	3/18/17	Contig	FDA	SAMN03344549	GCA_001417145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/145/GCA_001417145.1_ASM141714v1	-	CVM N41661
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.94051	32.6	-	CUFB01	132	3041	2686	3/31/15	3/26/17	Scaffold	SC	SAMEA1035045	GCA_001237405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/405/GCA_001237405.1_7067_4_90	-	51-15
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.97069	55.1	-	JYMP01	96	4940	4671	3/13/15	3/25/17	Scaffold	University of Minnesota	SAMN03333166	GCA_000952585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/585/GCA_000952585.1_ASM95258v1	26438492	MNCRE37
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.59042	56.7	-	NHQO01	88	4547	4310	6/19/17	6/22/17	Scaffold	FDA/CFSAN	SAMN07139881	GCA_002199045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/045/GCA_002199045.1_ASM219904v1	-	GK1029
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.13953	64.1	-	FVAF01	11	5217	5049	3/10/17	3/18/17	Contig	SC	SAMEA2071287	GCA_900130635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/635/GCA_900130635.1_10665_3_17	-	187
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.40576	61.2	-	DGLA01	26	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456264	GCA_002387205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/205/GCA_002387205.1_ASM238720v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.24981	67.3	-	LPDL01	114	6595	6240	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449430	GCA_001529785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/785/GCA_001529785.1_ASM152978v1	-	MSMB1081WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.31257	54.7	-	LPOB01	124	5304	5043	12/21/15	3/27/17	Contig	JCVI	SAMN04252959	GCA_001471255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/255/GCA_001471255.1_SMART_1141.v1	-	SMART_1141
Pseudomonas sp. CHM02	1463662	PRJNA238840	238840	Proteobacteria	Gammaproteobacteria	6.6578	60.9	-	JFCA01	132	6190	5993	4/7/14	4/9/17	Contig	Korea Research Institute of Bioscience and Biotechnology	SAMN02650256	GCA_000612585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/585/GCA_000612585.1_LCJ_Pseudomonas	-	CHM02
Streptomyces sp. NRRL S-920	1463921	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.24785	71.1	-	JODF01	198	7352	6999	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645438	GCA_000717945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/945/GCA_000717945.1_ASM71794v1	-	NRRL S-920
Bacillus sp. MRMR6	1928617	PRJNA357292	357292	Terrabacteria group	Firmicutes	5.43835	38.8	-	MSLS01	96	5276	4978	1/10/17	4/16/17	Contig	"California State University, Fresno"	SAMN06140743	GCA_001940785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/785/GCA_001940785.1_ASM194078v1	-	MRMR6
Acinetobacter sp. ANC 4973	1977871	PRJNA380882	380882	Proteobacteria	Gammaproteobacteria	3.39105	39.1	-	NEGM01	34	3258	3089	5/15/17	5/23/17	Contig	National Institute of Public Health	SAMN06641959	GCA_002135275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/275/GCA_002135275.1_ASM213527v1	-	ANC 4973
Clostridium sp. CAG:729	1262835	PRJEB992	206770	Terrabacteria group	Firmicutes	1.97997	33.9	-	CBJU01	48	2056	2020	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138767	GCA_000437655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/655/GCA_000437655.1_MGS729	-	-
Staphylococcus sp. HMSC078A12	1715200	PRJNA296329	296329	Terrabacteria group	Firmicutes	2.73761	35.8	-	LTOC01	113	2645	2520	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498660	GCA_001838075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/075/GCA_001838075.1_ASM183807v1	-	HMSC078A12
Streptococcus sp. HSISB1	1316409	PRJNA196122	196122	Terrabacteria group	Firmicutes	1.90688	37.3517	chromosome:CM002131.1	ASKA01	1	4320	4320	8/19/13	1/8/14	Chromosome	Top Institute Food and Nutrition (TIFN)	SAMN02471222	GCA_000448625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/625/GCA_000448625.1_HSISB1_1.0	24386196	HSISB1
Mycobacterium sp. 1165549.7	1834072	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.25522	67.9	-	LZLI01	201	5064	4724	6/17/16	4/13/17	Contig	JCVI	SAMN04634159	GCA_001673235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/235/GCA_001673235.1_ASM167323v1	-	1165549.7
Prochlorococcus sp. UBA3467	1947245	PRJNA348753	348753	Terrabacteria group	Cyanobacteria/Melainabacteria group	2.79008	51.5	-	DFRI01	273	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452980	GCA_002378185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/185/GCA_002378185.1_ASM237818v1	28894102	-
Prochlorococcus sp. UBA3999	1947246	PRJNA348753	348753	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.91459	60.4	-	DGBR01	176	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456501	GCA_002384845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/845/GCA_002384845.1_ASM238484v1	28894102	-
Mycobacterium sp. 1245111.1	1834073	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.62432	65.9	-	LZLV01	164	5440	5199	6/17/16	4/13/17	Contig	JCVI	SAMN04634196	GCA_001673405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/405/GCA_001673405.1_ASM167340v1	-	1245111.1
Streptococcus sp. HSISS1	1316410	PRJNA196124	196124	Terrabacteria group	Firmicutes	2.12814	40.2013	chromosome:CM002132.1	ASKB01	1	3878	3878	8/19/13	1/8/14	Chromosome	Top Institute Food and Nutrition (TIFN)	SAMN02471216	GCA_000448645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/645/GCA_000448645.1_HSISS1_1.0	24386196	HSISS1
Staphylococcus sp. HMSC056D08	1739455	PRJNA300105	300105	Terrabacteria group	Firmicutes	2.74418	35.7	-	LTNN01	145	2622	2503	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498686	GCA_001838445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/445/GCA_001838445.1_ASM183844v1	-	HMSC056D08
Clostridium sp. CAG:567	1262820	PRJEB936	206798	Terrabacteria group	Firmicutes	1.23913	27.7	-	CBJZ01	44	1266	1235	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138777	GCA_000437855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/855/GCA_000437855.1_MGS567	-	-
Acinetobacter sp. ANC 5054	1977877	PRJNA380882	380882	Proteobacteria	Gammaproteobacteria	3.39083	40	-	NEGG01	24	3263	3101	5/15/17	5/23/17	Contig	National Institute of Public Health	SAMN06641965	GCA_002135295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/295/GCA_002135295.1_ASM213529v1	-	ANC 5054
Bacillus sp. CBA7126	1856563	PRJDB4894	355260	Terrabacteria group	Firmicutes	4.21693	46.2	-	BDJJ01	2	4360	4142	12/7/16	4/16/17	Contig	Korea Basic Science Institute	SAMD00066804	GCA_001950175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/175/GCA_001950175.1_ASM195017v1	-	CBA7126
Streptomyces sp. NRRL F-2305	1463840	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.60483	72.4	-	JOFW01	211	7707	7109	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645274	GCA_000718375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/375/GCA_000718375.1_ASM71837v1	-	NRRL F-2305
Pseudomonas sp. RIT288	1470589	PRJNA239284	239284	Proteobacteria	Gammaproteobacteria	6.27329	60	-	JFYN01	44	5681	5493	4/14/14	4/9/17	Contig	Monash University Malaysia	SAMN02676622	GCA_000631985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/985/GCA_000631985.1_Willow_Endophyte_RIT288	24812212	RIT288
Enterobacter hormaechei	158836	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.27809	54.5	-	LPQV01	114	5280	5040	12/21/15	3/27/17	Contig	JCVI	SAMN04252886	GCA_001471875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/875/GCA_001471875.1_SMART_28.v1	-	SMART_28
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.27575	66.8	-	LPDX01	184	7608	7118	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449443	GCA_001529845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/845/GCA_001529845.1_ASM152984v1	-	MSMB1176WGS
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.41372	62.9	-	DGLJ01	45	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453827	GCA_002387305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/305/GCA_002387305.1_ASM238730v1	28894102	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.29191	64.2	-	FRYU01	26	5319	5188	12/14/16	3/21/17	Contig	SC	SAMEA2070837	GCA_900130645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/645/GCA_900130645.1_10665_3_19	-	189
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.60114	56.7	-	NHQP01	36	4527	4323	6/19/17	6/22/17	Scaffold	FDA/CFSAN	SAMN07139880	GCA_002199055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/055/GCA_002199055.1_ASM219905v1	-	GK1030
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.96037	55	-	JYLX01	74	4925	4658	3/13/15	3/25/17	Scaffold	University of Minnesota	SAMN03333148	GCA_000952595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/595/GCA_000952595.1_ASM95259v1	26438492	MNCRE7
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.56202	32.6	-	CUGO01	98	2567	2406	3/31/15	3/26/17	Scaffold	SC	SAMEA1035025	GCA_001237665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/665/GCA_001237665.1_7068_7_46	-	144377
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.72085	31.2	-	LBEM01	53	1792	1661	10/27/15	3/18/17	Contig	FDA	SAMN03344552	GCA_001417185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/185/GCA_001417185.1_ASM141718v1	-	CVM N43850
Lactobacillus plantarum	1590	PRJNA283610	283610	Terrabacteria group	Firmicutes	3.12767	45.1	-	LEBA01	99	3029	2841	12/3/16	3/28/17	Contig	"Faculty of Agro-industry, Prince of Songkla University, wageningen university"	SAMN03654502	GCA_001888645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/645/GCA_001888645.1_ASM188864v1	-	CIF17AN2
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.09441	60	-	FCIV01	16	4879	4709	1/21/16	3/27/17	Scaffold	SC	SAMEA2273978	GCA_001537065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/065/GCA_001537065.1_12082_3_13	-	2880STDY5682905
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.44639	46.9	-	CTKR01	183	4199	3905	3/26/15	3/26/17	Scaffold	SC	SAMEA980152	GCA_001222285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/285/GCA_001222285.1_4976_3_2	-	YE07/03
Corynebacterium diphtheriae bv. mitis	1806053	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.44598	53.6	-	LSWW01	44	2393	2176	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497026	GCA_002203595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/595/GCA_002203595.1_S81	-	5201
Mycoplasma ovis str. Michigan	1415773	PRJNA225755	225755	Terrabacteria group	Tenericutes	0.702511	31.7	chromosome:NC_023062.1/CP006935.1	-	1	810	766	12/16/13	4/17/17	Complete Genome	Purdue University	SAMN02641557	GCA_000508245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/245/GCA_000508245.1_ASM50824v1	24482515	Michigan
Brucella melitensis ADMAS-G1	1351836	PRJNA209795	209795	Proteobacteria	Alphaproteobacteria	3.28498	57.3	-	AUTT01	19	2795	2058	8/6/13	1/8/14	Contig	Madurai Kamaraj University	SAMN02470286	GCA_000444515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/515/GCA_000444515.1_Denovo_assembly	24115541	ADMAS-G1
Stenotrophomonas maltophilia	40324	PRJNA299546	299546	Proteobacteria	Gammaproteobacteria	3.18548	66.5	-	LQMY01	1005	3230	2466	4/8/16	4/8/16	Contig	University of Sao Paulo	SAMN04210077	GCA_001617985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/985/GCA_001617985.1_ASM161798v1	-	SM16
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.13143	41.2	-	CVYX01	76	2076	1890	6/23/15	3/26/17	Contig	SC	SAMEA1032933	GCA_001177885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/885/GCA_001177885.1_6830_4_90	-	EQUI0235
Enterococcus faecium EnGen0133	1157420	PRJNA88267	88267	Terrabacteria group	Firmicutes	2.65212	38.2	-	AISP01	10	2713	2466	5/3/13	4/10/17	Scaffold	Broad Institute	SAMN00808948	GCA_000391825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/825/GCA_000391825.1_Ente_faec_7330446-2_V1	-	7330446-2
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.13745	52.5	-	CQJW01	78	2511	2187	3/23/15	4/11/17	Contig	SC	SAMEA1690500	GCA_001135125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/125/GCA_001135125.1_8727_8_58	-	GCGS154
Streptococcus mutans B05Sm11	1225187	PRJNA173247	173247	Terrabacteria group	Firmicutes	2.03637	37	-	ALYO01	53	2053	1915	1/24/14	3/24/17	Contig	New York University College of Dentistry	SAMN02641534	GCA_000522565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/565/GCA_000522565.1_out_k25_n4_samp01-contigs.fa	24291226	B05Sm11
Enterococcus faecalis EnGen0116	1157375	PRJNA88253	88253	Terrabacteria group	Firmicutes	2.87269	37.6	-	AISI01	8	2884	2758	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808940	GCA_000391685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/685/GCA_000391685.1_Ente_faec_UAA906_V1	-	UAA906
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	4.47652	27.9	-	LFQZ01	223	4428	4145	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779969	GCA_001574095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/095/GCA_001574095.1_ASM157409v1	26939550	SU1891
Klebsiella pneumoniae subsp. pneumoniae Ecl8	1226680	PRJEB401	178198	Proteobacteria	Gammaproteobacteria	5.53086	57.2	-	CANH01	2	5524	5229	11/9/12	2/21/17	Scaffold	WTSI	SAMEA2272247	GCA_000315385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/385/GCA_000315385.1_ASM31538v1	-	Ecl8
Bacillus subtilis	1423	PRJEB16928	351038	Terrabacteria group	Firmicutes	4.24624	43.3	-	FODG01	23	4490	4294	10/29/16	3/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487778	GCA_900110305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/305/GCA_900110305.1_IMG-taxon_2623620441_annotated_assembly	-	BGSC 3A28
Vibrio parahaemolyticus S126	1394661	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.0641	45.3	-	AWIZ01	427	4816	4634	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338975	GCA_000489915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/915/GCA_000489915.1_S126	-	S126
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.97192	37.7	-	MLPL01	298	2022	1805	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297130	GCA_001869285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/285/GCA_001869285.1_ASM186928v1	27118061	AWRIB880
Brucella abortus 84-0928	1328344	PRJNA200927	200927	Proteobacteria	Alphaproteobacteria	3.28654	57.2	-	ATHB01	4	3378	3151	6/21/13	3/24/17	Contig	Broad Institute	SAMN02092507	GCA_000413575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/575/GCA_000413575.1_Bruc_abor_biovar_1_84-0928_V1	-	84-0928
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.82836	32.3	-	MRLJ01	155	1895	1529	4/19/17	4/22/17	Scaffold	FOI Swedish Defence Research Agency	SAMN03773724	GCA_002100165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/165/GCA_002100165.1_ASM210016v1	28348839	F0608
Clostridioides difficile DA00203	1151344	PRJNA85863	85863	Terrabacteria group	Firmicutes	4.15352	28.8	-	AVJS01	14	3849	3701	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766663	GCA_000450405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/405/GCA_000450405.2_ASM45040v2	-	DA00203
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	3.9659	47.6	-	JSTY01	142	3756	3539	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104875	GCA_000788775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/775/GCA_000788775.1_ASM78877v1	25538191	2012HC-25
Bacillus thuringiensis serovar andalousiensis	257985	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.71939	34.8	-	NFCS01	166	7138	6608	5/17/17	6/15/17	Scaffold	Huazhong Agricultural University	SAMN05934508	GCA_002146595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/595/GCA_002146595.1_ASM214659v1	-	BGSC 4AW1
Burkholderia pseudomallei MSHR3016	1435997	PRJNA231531	231531	Proteobacteria	Betaproteobacteria	7.29874	68	-	JQEH01	4	7545	6851	11/11/14	4/10/17	Scaffold	Los Alamos National Laboratory	SAMN02998042	GCA_000774795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/795/GCA_000774795.1_BPP	25676747	MSHR3016
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.33752	67.1	-	MUSH01	140	7893	7410	2/10/17	4/2/17	Contig	University of British Columbia	SAMN05001873	GCA_001993235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/235/GCA_001993235.1_ASM199323v1	-	VC7379
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.62878	50.8	-	FTUL01	356	5167	4450	1/28/17	3/2/17	Contig	SC	SAMEA2054482	GCA_900158125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/125/GCA_900158125.1_9803_4_8	-	2090STDY5461826
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.60752	38.2	-	FJDQ01	47	3326	3161	2/20/16	3/27/17	Contig	SC	SAMEA2064369	GCA_900049255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/255/GCA_900049255.1_10771_3_25	-	2531STDY5467402
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.18824	58.6	-	MTHN01	326	5946	5369	4/28/17	6/9/17	Contig	Massey University	SAMN06197052	GCA_002174985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/985/GCA_002174985.1_ASM217498v1	28369338	C14
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	1.96968	41.3	-	CEJA01	65	1987	1854	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233991	GCA_000938155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/155/GCA_000938155.1_Velvet_assembly	-	S12R
Streptococcus agalactiae FSL S3-501	1154788	PRJNA86167	86167	Terrabacteria group	Firmicutes	2.15416	35.5	-	ALQE01	145	2320	2031	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993321	GCA_000289795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/795/GCA_000289795.1_ASM28979v1	-	FSL S3-501
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	3.81837	38.9	-	JSDL01	52	3714	3525	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068269	GCA_000805215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/215/GCA_000805215.1_ASM80521v1	25487793	2011ZJAB4
Pseudomonas aeruginosa BL20	1402561	PRJNA219923	219923	Proteobacteria	Gammaproteobacteria	6.74064	66.1	-	AXPG01	18	6342	6137	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360733	GCA_000480745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/745/GCA_000480745.1_Pseu_aeru_BL20_V1	-	BL20
Shigella flexneri Shi06HN344	1434176	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.42746	50.4	-	AZQC01	308	4934	3945	1/29/14	8/4/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437411	GCA_000566465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/465/GCA_000566465.1_ASM56646v1	-	Shi06HN344
Bacillus anthracis	1392	PRJNA281298	281298	Terrabacteria group	Firmicutes	5.45842	35.0653	plasmid unnamed 1:NZ_CM004500.1/CM004500.1	LBBZ01	38	6096	5710	6/28/16	3/28/17	Scaffold	University of Oslo	SAMN03486970	GCA_001677305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/305/GCA_001677305.1_ASM167730v1	-	K1
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.8681	35	-	JQPT01	406	4532	4038	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949570	GCA_001568025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/025/GCA_001568025.1_ASM156802v1	26833181	56647
Streptococcus pyogenes ABC020049540	1439190	PRJNA233063	233063	Terrabacteria group	Firmicutes	1.81458	38.6	-	JJIH01	2	1862	1732	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567412	GCA_000631325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/325/GCA_000631325.1_Stre_pyog_ABC020049540_V1	-	ABC020049540
Neisseria meningitidis NM3001	1069622	PRJNA71019	71019	Proteobacteria	Betaproteobacteria	2.15248	51.7	-	ALYA01	29	2463	2054	8/27/12	3/21/17	Contig	Institute for Genome Sciences	SAMN00849789	GCA_000293665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/665/GCA_000293665.1_ASM29366v1	-	NM3001
Helicobacter pylori GAM265BSii	1159049	PRJNA89269	89269	Proteobacteria	delta/epsilon subdivisions	1.66008	39.2	-	APDY01	55	1632	1457	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436695	GCA_000345505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/505/GCA_000345505.2_ASM34550v2	-	GAM265BSii
Streptococcus pneumoniae Netherlands15B-37	760888	PRJNA48969	48969	Terrabacteria group	Firmicutes	2.10144	39.6	-	AGQB01	13	2281	1996	10/25/11	3/9/17	Contig	Institute for Genome Sciences	SAMN00792697	GCA_000233125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/125/GCA_000233125.2_ASM23312v2	-	Netherlands15B-37
Mycoplasma genitalium M2321	663918	PRJNA39739	39739	Terrabacteria group	Tenericutes	0.579977	31.7	chromosome:NC_018495.1/CP003770.1	-	1	570	491	8/21/12	4/7/17	Complete Genome	Louisiana State University Health Sciences Center	SAMN02603571	GCA_000292405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/405/GCA_000292405.1_ASM29240v1	23045512	M2321
Mycobacterium tuberculosis PanR0305	1346786	PRJNA208575	208575	Terrabacteria group	Actinobacteria	4.38696	65.5499	chromosome:NZ_CM002078.1/CM002078.1	ATER01	1	4270	4066	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471092	GCA_000443915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/915/GCA_000443915.1_fedora0305_IS	23884993	PanR0305
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.2849	69.2	-	LNBG01	370	5179	4651	4/4/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04226718	GCA_001609895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/895/GCA_001609895.1_ASM160989v1	-	MAHP-10058-06
Bacillus cereus BAG2O-1	1053176	PRJNA70317	70317	Terrabacteria group	Firmicutes	6.69791	34.8	-	AHCW01	13	7077	6573	5/16/13	3/24/17	Scaffold	Broad Institute	SAMN02596808	GCA_000399265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/265/GCA_000399265.1_Baci_cere_BAG2O-1_G13184_V1	-	BAG2O-1
Staphylococcus epidermidis	1282	PRJNA293017	293017	Terrabacteria group	Firmicutes	2.38373	32.1	-	LILE01	85	2351	2233	10/26/15	3/27/17	Contig	CSIR-Institute of Microbial Technology	SAMN03996083	GCA_001412455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/455/GCA_001412455.1_ASM141245v1	-	MTCC 3382
Listeria monocytogenes	1639	PRJNA270625	270625	Terrabacteria group	Firmicutes	2.9314	37.9	chromosome:NZ_CM003382.1/CM003382.1	JWLP01	1	5957	5756	8/6/15	2/28/17	Chromosome	University of Bern	SAMN03267737	GCA_001262395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/395/GCA_001262395.1_ASM126239v1	25813546	JF5171
Yersinia pestis PY-92	992174	PRJNA64375	64375	Proteobacteria	Gammaproteobacteria	4.76272	47.5	-	AKTH01	545	4678	4298	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141495	GCA_000269105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/105/GCA_000269105.1_ASM26910v1	-	PY-92
Campylobacter jejuni K1	1365661	PRJNA212385	212385	Proteobacteria	delta/epsilon subdivisions	1.6199	30.5	-	AUUO01	10	1705	1575	5/7/14	3/16/17	Scaffold	University of Exeter	SAMN02744563	GCA_000686405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/405/GCA_000686405.1_Assembly_1	24856088	k1
Mycoplasma genitalium M6282	662946	PRJNA39705	39705	Terrabacteria group	Tenericutes	0.579504	31.7	chromosome:NC_018496.1/CP003771.1	-	1	569	451	8/21/12	4/7/17	Complete Genome	LSU Health Sciences Center	SAMN02603573	GCA_000292445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/445/GCA_000292445.1_ASM29244v1	23045512	M6282
Mycoplasma genitalium M6320	662945	PRJNA39703	39703	Terrabacteria group	Tenericutes	0.579796	31.7	chromosome:NC_018497.1/CP003772.1	-	1	569	483	8/21/12	4/7/17	Complete Genome	LSU Health Sciences Center	SAMN02603572	GCA_000292485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/485/GCA_000292485.1_ASM29248v1	23045512	M6320
Mycoplasma genitalium M2288	662947	PRJNA39707	39707	Terrabacteria group	Tenericutes	0.579558	31.7	chromosome:NC_018498.1/CP003773.1	-	1	567	498	8/21/12	4/7/17	Complete Genome	LSU Health Sciences Center	SAMN02603574	GCA_000292505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/505/GCA_000292505.1_ASM29250v1	23045512	M2288
Candidatus Pelagibacter sp. IMCC9063	1002672	PRJNA62303	62303	Proteobacteria	Alphaproteobacteria	1.28473	31.7	chromosome:NC_015380.1/CP002511.1	-	1	1391	1308	4/5/11	4/7/17	Complete Genome	Inha University	SAMN02603337	GCA_000195085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/085/GCA_000195085.1_ASM19508v1	21515764	IMCC9063
Campylobacter jejuni 20176	1365654	PRJNA212340	212340	Proteobacteria	delta/epsilon subdivisions	1.72614	30.2	-	AUUQ01	28	1813	1691	5/7/14	3/16/17	Scaffold	university of exeter	SAMN02744560	GCA_000686445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/445/GCA_000686445.1_Assembly_1	24856088	20176
Yersinia pestis PY-93	992175	PRJNA64377	64377	Proteobacteria	Gammaproteobacteria	4.77067	47.4	-	AKTI01	487	4666	4313	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141496	GCA_000269125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/125/GCA_000269125.1_ASM26912v1	-	PY-93
Listeria monocytogenes serotype 4b str. H7858	267410	PRJNA10752	10752	Terrabacteria group	Firmicutes	2.97225	37.9	-	AADR01	181	3099	2888	5/4/04	2/26/17	Scaffold	TIGR	SAMN02415269	GCA_000167155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/155/GCA_000167155.1_ASM16715v1	15115801	4b H7858
Staphylococcus epidermidis	1282	PRJNA295134	295134	Terrabacteria group	Firmicutes	2.60071	31.8	-	LJIF01	87	2562	2420	11/3/15	3/27/17	Contig	Northwest A&F University	SAMN04041579	GCA_001431005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/005/GCA_001431005.1_ASM143100v1	-	NW32
Bacillus cereus BAG2O-3	1053178	PRJNA70321	70321	Terrabacteria group	Firmicutes	5.81244	35.1	-	AHCY01	7	6191	5793	5/16/13	3/24/17	Scaffold	Broad Institute	SAMN02596810	GCA_000399285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/285/GCA_000399285.1_Baci_cere_BAG2O-3_G13186_V1	-	BAG2O-3
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.32101	69.1	-	LNBH01	201	5118	4684	4/4/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04226719	GCA_001609905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/905/GCA_001609905.1_ASM160990v1	-	MAH-P-8933-06
Mycobacterium tuberculosis PanR0311	1346781	PRJNA208580	208580	Terrabacteria group	Actinobacteria	4.40438	65.1979	chromosome:NZ_CM002080.1/CM002080.1	ATEM01	1	4320	3997	8/2/13	3/8/17	Chromosome	Texas A&M University	SAMN02471084	GCA_000443935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/935/GCA_000443935.1_fedora0311b_IS	23884993	PanR0311
Mycoplasma genitalium G37	243273	PRJNA97	97	Terrabacteria group	Tenericutes	0.580076	31.7	chromosome:NC_000908.2/L43967.2	-	1	566	515	10/30/95	4/7/17	Complete Genome	TIGR	SAMN02603983	GCA_000027325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/027/325/GCA_000027325.1_ASM2732v1	"756,999,316,407,165"	G-37
Streptococcus pneumoniae NP127	760886	PRJNA48965	48965	Terrabacteria group	Firmicutes	2.16459	39.7	-	AGQC01	12	2399	2083	10/25/11	3/8/17	Contig	Institute for Genome Sciences	SAMN00792702	GCA_000233145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/145/GCA_000233145.2_ASM23314v2	-	NP127
Helicobacter pylori GAM268Bii	1159050	PRJNA89271	89271	Proteobacteria	delta/epsilon subdivisions	1.63008	39.2	-	APDZ01	64	1605	1438	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436786	GCA_000345525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/525/GCA_000345525.2_ASM34552v2	-	GAM268Bii
Neisseria meningitidis alpha704	1200386	PRJEB65	169895	Proteobacteria	Betaproteobacteria	1.98336	52.1	-	CAJS01	42	2308	1961	6/21/12	3/21/17	Contig	CeBiTec	SAMEA2272052	GCA_000304435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/435/GCA_000304435.1_Nm_alpha704	-	alpha704
Streptococcus pyogenes ABC020048885	1439187	PRJNA233062	233062	Terrabacteria group	Firmicutes	1.75093	38.6	-	JJII01	3	1764	1648	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567411	GCA_000631345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/345/GCA_000631345.1_Stre_pyog_ABC020048885_V1	-	ABC020048885
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.85581	35	-	JQPW01	340	4407	3953	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949554	GCA_001568045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/045/GCA_001568045.1_ASM156804v1	26833181	56652
Bacillus anthracis	1392	PRJNA359364	359364	Terrabacteria group	Firmicutes	5.8381	34.9	-	MTAU01	66	6250	5834	3/9/17	3/11/17	Scaffold	University of Alberta	SAMN06190355	GCA_002024565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/565/GCA_002024565.1_ASM202456v1	-	F34
Shigella flexneri Shi06HN347	1434177	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.42263	50.4	-	AZQD01	304	4952	4020	1/29/14	8/4/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437412	GCA_000566485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/485/GCA_000566485.1_ASM56648v1	-	Shi06HN347
Pseudomonas aeruginosa BL19	1402560	PRJNA219922	219922	Proteobacteria	Gammaproteobacteria	6.37853	66.3	-	AXPH01	5	6009	5840	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360732	GCA_000480765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/765/GCA_000480765.1_Pseu_aeru_BL19_V1	-	BL19
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	4.05642	39	-	JSDK01	87	3954	3786	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068268	GCA_000805225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/225/GCA_000805225.1_ASM80522v1	25487793	2011ZJAB3
Streptococcus agalactiae FSL S3-603	1154789	PRJNA86169	86169	Terrabacteria group	Firmicutes	2.20827	35.6	-	ALQF01	105	2327	2102	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993452	GCA_000289815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/815/GCA_000289815.1_ASM28981v1	-	FSL S3-603
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05699	41.1	-	CEIR01	67	2039	1939	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234005	GCA_000938195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/195/GCA_000938195.1_Velvet_assembly	-	S13F
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.34474	58.4	-	MTHQ01	366	6145	5479	4/28/17	6/9/17	Contig	Massey University	SAMN06197055	GCA_002175005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/005/GCA_002175005.1_ASM217500v1	28369338	C17
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.38326	38.3	-	FJDR01	21	3070	2953	2/20/16	3/27/17	Contig	SC	SAMEA2064218	GCA_900049265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/265/GCA_900049265.1_10771_3_26	-	2531STDY5467403
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.61546	50.8	-	FTUW01	346	5166	4445	1/28/17	2/26/17	Contig	SC	SAMEA2054565	GCA_900158235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/235/GCA_900158235.1_9803_4_20	-	2090STDY5461838
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.03094	67.1	-	MUSJ01	177	7630	7158	2/10/17	4/2/17	Contig	University of British Columbia	SAMN05001875	GCA_001993255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/255/GCA_001993255.1_ASM199325v1	-	VC8222
Burkholderia pseudomallei MSHR1000	1437001	PRJNA231853	231853	Proteobacteria	Betaproteobacteria	7.31852	68.1	-	JQEF01	2	7573	6957	11/11/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02998025	GCA_000774805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/805/GCA_000774805.1_BPT	25676747	MSHR1000
Bacillus thuringiensis serovar novosibirsk	257986	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.73747	34.9	-	NFCT01	110	7207	6731	5/17/17	5/24/17	Scaffold	Huazhong Agricultural University	SAMN05934509	GCA_002146615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/615/GCA_002146615.1_ASM214661v1	-	BGSC 4AX1
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.0179	47.5	-	JSTX01	123	3824	3659	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104866	GCA_000788795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/795/GCA_000788795.1_ASM78879v1	25538191	2012HC-24
Clostridioides difficile DA00210	1151345	PRJNA85865	85865	Terrabacteria group	Firmicutes	4.25059	28.3	-	AVJT01	118	4044	3844	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766664	GCA_000450425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/425/GCA_000450425.2_ASM45042v2	-	DA00210
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.84879	32.3	-	MRLK01	106	2008	1569	4/19/17	4/22/17	Scaffold	FOI Swedish Defence Research Agency	SAMN03773721	GCA_002100175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/175/GCA_002100175.1_ASM210017v1	28348839	F0295
Brucella abortus 85-1058	1328345	PRJNA200928	200928	Proteobacteria	Alphaproteobacteria	3.28642	57.2	-	ATHA01	4	3380	3154	6/21/13	3/24/17	Contig	Broad Institute	SAMN02092508	GCA_000413595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/595/GCA_000413595.1_Bruc_abor_biovar_1_85-1058_V1	-	85-1058
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.03614	37.9	-	MLPT01	560	2124	1802	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297138	GCA_001869295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/295/GCA_001869295.1_ASM186929v1	27118061	AWRIB897
Vibrio parahaemolyticus S125	1394660	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.08695	45.3	-	AWJA01	397	4836	4641	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338974	GCA_000489935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/935/GCA_000489935.1_S125	-	S125
Bacillus subtilis	1423	PRJEB18886	360773	Terrabacteria group	Firmicutes	3.96144	43.6	-	FTMW01	15	4199	3964	1/14/17	3/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05878487	GCA_900156365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/365/GCA_900156365.1_IMG-taxon_2708742540_annotated_assembly	-	RU36A
Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884	667127	PRJNA40083	40083	Proteobacteria	Gammaproteobacteria	5.45003	56.9	-	ACZD01	51	5483	4850	9/22/09	2/21/17	Scaffold	Baylor College of Medicine	SAMN00120581	GCA_000163455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/455/GCA_000163455.1_ASM16345v1	-	ATCC 13884
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	4.31189	27.9	-	LFPW01	99	4203	3987	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779970	GCA_001574115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/115/GCA_001574115.1_ASM157411v1	26939550	SU1054
Enterococcus faecalis EnGen0117	1157376	PRJNA88255	88255	Terrabacteria group	Firmicutes	2.97398	37.4	-	AISJ01	21	3013	2877	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808941	GCA_000391705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/705/GCA_000391705.1_Ente_faec_UAA907_V1	-	UAA907
Streptococcus mutans B13Sm1	1225188	PRJNA173248	173248	Terrabacteria group	Firmicutes	2.15193	36.8	-	ALYP01	46	2139	1984	1/24/14	3/24/17	Contig	New York University College of Dentistry	SAMN02641535	GCA_000522585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/585/GCA_000522585.1_out_k45_n4_samp02-contigs.fa	24291226	B13Sm1
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14551	52.4	-	CQNS01	68	2509	2194	3/22/15	4/11/17	Contig	SC	SAMEA1690365	GCA_001135385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/385/GCA_001135385.1_8727_8_29	-	GCGS125
Enterococcus faecium EnGen0126	1157421	PRJNA88269	88269	Terrabacteria group	Firmicutes	2.59173	38.3	-	AISQ01	9	2629	2395	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808949	GCA_000391845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/845/GCA_000391845.1_Ente_faec_7330519-3_V1	-	7330519-3
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12617	41.2	-	CWCU01	73	2043	1873	6/23/15	3/26/17	Contig	SC	SAMEA1032934	GCA_001177905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/905/GCA_001177905.1_6903_6_19	-	EQUI0164
Stenotrophomonas maltophilia	40324	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.58842	57.4	-	JVEW01	2120	-	-	7/10/15	7/13/16	Scaffold	University of Washington	SAMN03197688	GCA_001073125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/125/GCA_001073125.1_ASM107312v1	26230489	495_SMAL
Brucella melitensis 548	1457189	PRJNA236790	236790	Proteobacteria	Alphaproteobacteria	3.27471	57.3	-	JDFS01	123	3406	3047	3/14/14	3/14/14	Contig	"The Federal Goverment Health Institution ""Stavropol Plague Control Reseach Institute"" of the Federal Service for Supervision in the Sphere of Consumer Rights Protection and Human Welfare"	SAMN02602918	GCA_000591005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/005/GCA_000591005.1_548	-	548
Rickettsia bellii	33990	PRJNA316319	316319	Proteobacteria	Alphaproteobacteria	1.5798	31.6727	chromosome:NZ_CP015010.1/CP015010.1; plasmid unnamed:NZ_CP015011.1/CP015011.1	-	2	1593	1398	4/4/17	4/5/17	Complete Genome	University of New Hampshire	SAMN04576394	GCA_002078315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/315/GCA_002078315.1_ASM207831v1	-	-
Corynebacterium diphtheriae bv. mitis	1806053	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.36952	53.6	-	LSWY01	33	2326	2126	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497025	GCA_002203615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/615/GCA_002203615.1_S84	-	5200
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.46295	47	-	CTJF01	88	4187	3949	3/26/15	3/26/17	Scaffold	SC	SAMEA980172	GCA_001222305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/305/GCA_001222305.1_5103_7_2	-	YE226/02
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.07334	59.5	-	FCLY01	15	4796	4652	1/21/16	3/27/17	Scaffold	SC	SAMEA2274073	GCA_001537085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/085/GCA_001537085.1_12082_3_93	-	2880STDY5683001
Lactobacillus plantarum	1590	PRJNA283610	283610	Terrabacteria group	Firmicutes	3.19863	44.5	-	LEAY01	34	3123	2937	12/3/16	3/28/17	Contig	"Faculty of Agro-industry, Prince of Songkla University, wageningen university"	SAMN03654521	GCA_001888655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/655/GCA_001888655.1_ASM188865v1	-	DSM 2601
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.73021	31.3	-	LBEI01	35	1795	1699	10/27/15	3/18/17	Contig	FDA	SAMN03344556	GCA_001417205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/205/GCA_001417205.1_ASM141720v1	-	CVM N47960
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.51284	32.6	-	CUCT01	101	2496	2368	3/31/15	4/21/17	Scaffold	SC	SAMEA1035153	GCA_001237705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/705/GCA_001237705.1_7067_4_36	-	51-04
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.52568	55.9	-	JYMF01	65	4385	4175	3/13/15	3/25/17	Scaffold	University of Minnesota	SAMN03333156	GCA_000952605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/605/GCA_000952605.1_ASM95260v1	26438492	MNCRE14
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.60436	56.7	-	NHQQ01	27	4532	4328	6/19/17	6/22/17	Scaffold	FDA/CFSAN	SAMN07139879	GCA_002199065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/065/GCA_002199065.1_ASM219906v1	-	GK1034
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.26971	64.1	-	FRYQ01	28	5351	5166	12/14/16	3/21/17	Contig	SC	SAMEA2070431	GCA_900130655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/655/GCA_900130655.1_10665_3_18	-	188
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.19733	64.1	-	DGIU01	89	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457687	GCA_002387375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/375/GCA_002387375.1_ASM238737v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.65942	67.1	-	LPEB01	200	7025	6582	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449448	GCA_001529865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/865/GCA_001529865.1_ASM152986v1	-	MSMB1188WGS
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.11869	55.1	-	LPQW01	87	5104	4821	12/21/15	3/27/17	Contig	JCVI	SAMN04252885	GCA_001471885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/885/GCA_001471885.1_SMART_27.v1	-	SMART_27
Pseudomonas sp. RIT357	1470593	PRJNA239294	239294	Proteobacteria	Gammaproteobacteria	6.17847	59.8	-	JFYX01	49	5654	5495	4/14/14	4/9/17	Contig	Monash University Malaysia	SAMN02676632	GCA_000632245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/245/GCA_000632245.1_Willow_Endophyte_RIT357	-	RIT357
Streptomyces sp. NRRL F-4335	1463850	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.08601	71.8	-	JOFY01	1705	7746	7340	7/2/14	8/22/15	Contig	University of Illinois	SAMN02645276	GCA_000718395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/395/GCA_000718395.1_ASM71839v1	-	NRRL F-4335
Bacillus sp. I-2	1857572	PRJNA324449	324449	Terrabacteria group	Firmicutes	3.70806	41.6	-	LZRW01	47	3834	3693	1/30/17	4/17/17	Contig	University of Neuchatel	SAMN05204094	GCA_001974945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/974/945/GCA_001974945.1_ASM197494v1	-	I-2
Acinetobacter sp. ANC 3903	1977883	PRJNA380882	380882	Proteobacteria	Gammaproteobacteria	3.30888	41.6	-	NEGA01	30	3224	2992	5/15/17	5/23/17	Contig	National Institute of Public Health	SAMN06641971	GCA_002135315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/315/GCA_002135315.1_ASM213531v1	-	ANC 3903
Clostridium sp. CAG:269	1262788	PRJEB801	206759	Terrabacteria group	Firmicutes	1.56201	26.5	-	CBJE01	69	1572	1540	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138778	GCA_000437875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/875/GCA_000437875.1_MGS269	-	-
Staphylococcus sp. HMSC061G12	1739441	PRJNA300091	300091	Terrabacteria group	Firmicutes	2.70886	35.7	-	LTNL01	195	2568	2452	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498685	GCA_001838465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/465/GCA_001838465.1_ASM183846v1	-	HMSC061G12
Streptococcus sp. HSISS2	1316411	PRJNA196125	196125	Terrabacteria group	Firmicutes	2.36091	40.276	chromosome:CM002133.1	ASKC01	1	4494	4494	8/19/13	1/8/14	Chromosome	Top Institute Food and Nutrition (TIFN)	SAMN02471217	GCA_000448665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/665/GCA_000448665.1_HSISS2_1.0	24386196	HSISS2
Mycobacterium sp. 1165196.3	1834071	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.58171	67.9	-	LZLU01	276	5390	5003	6/17/16	4/13/17	Contig	JCVI	SAMN04634197	GCA_001673415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/415/GCA_001673415.1_ASM167341v1	-	1165196.3
Prochlorococcus sp. W6	569155	PRJNA169510	169510	Terrabacteria group	Cyanobacteria/Melainabacteria group	0.385307	31.3	-	ALPK01	338	-	-	8/20/12	7/29/15	Contig	Massachusetts Institute of Technology	SAMN02470492	GCA_000291865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/865/GCA_000291865.1_ProW6_v1.0	22895163	-
Mycobacterium sp. 1081908.1	1834066	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.61373	68.8	-	LZLY01	160	5419	5164	6/17/16	4/13/17	Contig	JCVI	SAMN04634193	GCA_001673535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/535/GCA_001673535.1_ASM167353v1	-	1081908.1
Streptococcus sp. DD11	1777879	PRJNA304333	304333	Terrabacteria group	Firmicutes	2.80858	47.4	-	LQRF01	103	2781	2765	3/2/16	3/24/16	Scaffold	University of Kaiserslautern	SAMN04324617	GCA_001578865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/865/GCA_001578865.1_ASM157886v1	27303717	DD11
Staphylococcus sp. HMSC061F01	1739445	PRJNA300095	300095	Terrabacteria group	Firmicutes	2.47016	32.6	-	LTNM01	98	2409	2305	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498687	GCA_001838475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/475/GCA_001838475.1_ASM183847v1	-	HMSC061F01
Clostridium sp. CAG:914	1262846	PRJEB1033	206936	Terrabacteria group	Firmicutes	1.25621	25.8	-	CBJY01	49	1284	1262	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138779	GCA_000437895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/895/GCA_000437895.1_MGS914	-	-
Acinetobacter sp. ANC 4470	1977881	PRJNA380882	380882	Proteobacteria	Gammaproteobacteria	3.0031	38.9	-	NEGC01	17	2873	2708	5/15/17	5/23/17	Contig	National Institute of Public Health	SAMN06641969	GCA_002135335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/335/GCA_002135335.1_ASM213533v1	-	ANC 4470
Bacillus sp. GZB	936599	PRJNA362831	362831	Terrabacteria group	Firmicutes	4.07701	46.2	-	MTQG01	23	4035	3865	1/31/17	4/17/17	Contig	Guangdong University of Technology	SAMN06249519	GCA_001975995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/995/GCA_001975995.1_ASM197599v1	-	GZB
Streptomyces sp. NRRL S-31	1463898	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.73734	72.8	-	JOCB01	322	7577	7004	7/2/14	3/14/17	Contig	University of Illinois	SAMN02645408	GCA_000718775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/775/GCA_000718775.1_ASM71877v1	-	NRRL S-31
Pseudomonas sp. H1h	1397280	PRJNA226203	226203	Proteobacteria	Gammaproteobacteria	6.36815	60.3	-	AYMJ01	78	5764	5604	4/18/14	4/9/17	Contig	University of Malaya	SAMN02729852	GCA_000633255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/255/GCA_000633255.1_de_novo	-	H1h
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.11815	55	-	LPQR01	90	5048	4810	12/21/15	3/27/17	Contig	JCVI	SAMN04252890	GCA_001471915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/915/GCA_001471915.1_SMART_267.v1	-	SMART_267
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.34361	67.3	-	LPEG01	117	6639	6281	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449454	GCA_001529895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/895/GCA_001529895.1_ASM152989v1	-	MSMB1216WGS
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.41207	64.2	-	DGJN01	15	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452777	GCA_002387495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/495/GCA_002387495.1_ASM238749v1	28894102	-
Acinetobacter pittii	48296	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.6079	38.6	-	DFWP01	106	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453740	GCA_002380965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/965/GCA_002380965.1_ASM238096v1	28894102	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21239	64.1	-	FVAR01	4	5324	5154	3/10/17	3/18/17	Contig	SC	SAMEA2071284	GCA_900130665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/665/GCA_900130665.1_10665_3_8	-	178
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.59723	56.7	-	NHQR01	39	4517	4311	6/19/17	6/22/17	Scaffold	FDA/CFSAN	SAMN07139878	GCA_002199095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/095/GCA_002199095.1_ASM219909v1	-	GK1035
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.96268	55	-	JYLY01	68	4920	4681	3/13/15	3/25/17	Scaffold	University of Minnesota	SAMN03333149	GCA_000952655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/655/GCA_000952655.1_ASM95265v1	26438492	MNCRE8
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.71745	32.6	-	CUGM01	159	2664	2502	3/31/15	4/21/17	Scaffold	SC	SAMEA1035150	GCA_001237725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/725/GCA_001237725.1_7068_7_45	-	104626
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.75911	31.3	-	LBEH01	44	1843	1739	10/27/15	3/18/17	Contig	FDA	SAMN03344557	GCA_001417225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/225/GCA_001417225.1_ASM141722v1	-	CVM N49243
Lactobacillus plantarum	1590	PRJNA283610	283610	Terrabacteria group	Firmicutes	3.24201	44.4	-	LEAX01	57	3156	2969	12/3/16	3/28/17	Contig	"Faculty of Agro-industry, Prince of Songkla University, wageningen university"	SAMN03654440	GCA_001888665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/665/GCA_001888665.1_ASM188866v1	-	DSM 20246
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.11233	60	-	FCGC01	19	4869	4717	1/21/16	3/27/17	Scaffold	SC	SAMEA2274094	GCA_001537105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/105/GCA_001537105.1_12045_8_17	-	2880STDY5683024
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.44555	46.9	-	CTKM01	126	4222	3942	3/26/15	3/26/17	Scaffold	SC	SAMEA980136	GCA_001222445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/445/GCA_001222445.1_4976_6_3	-	YE201/02
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.39896	53.6	-	LSWX01	65	2316	2110	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497024	GCA_002203625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/625/GCA_002203625.1_S82	-	5191
Clostridium kluyveri	1534	PRJNA355892	355892	Terrabacteria group	Firmicutes	4.51293	31.6143	chromosome:NZ_CP018335.1/CP018335.1; plasmid unnamed:NZ_CP018336.1/CP018336.1	-	2	4422	4141	12/13/16	4/16/17	Complete Genome	Anhui University	SAMN06094710	GCA_001902295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/295/GCA_001902295.1_ASM190229v1	-	JZZ
Brucella melitensis	29459	PRJNA239190	239190	Proteobacteria	Alphaproteobacteria	3.27872	57.2	-	JFAS01	73	3313	2823	6/12/14	6/12/14	Contig	"The Federal Goverment Health Institution ""Stavropol Plague Control Reseach Institute"" of the Federal Service for Supervision in the Sphere of Consumer Rights Protection and Human Welfare"	SAMN02650267	GCA_000705095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/095/GCA_000705095.1_Brucella_melitensis_C-554	-	C-554
Stenotrophomonas maltophilia	40324	PRJNA248909	248909	Proteobacteria	Gammaproteobacteria	4.60257	66.2	-	MPSI01	2	4142	4034	12/6/16	12/6/16	Scaffold	University of Oregon	SAMN06040735	GCA_001889565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/565/GCA_001889565.1_ASM188956v1	-	-
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.13577	41.2	-	CWEX01	80	2080	1895	6/23/15	3/26/17	Contig	SC	SAMEA1032936	GCA_001177925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/925/GCA_001177925.1_6903_8_61	-	EQUI0206
Enterococcus faecium EnGen0135	1157422	PRJNA88271	88271	Terrabacteria group	Firmicutes	2.58739	38.3	-	AISR01	7	2621	2397	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808950	GCA_000391865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/865/GCA_000391865.1_Ente_faec_7330614-1_V1	-	7330614-1
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.1457	52.4	-	CQJP01	80	2509	2198	3/22/15	4/10/17	Contig	SC	SAMEA1677467	GCA_001135405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/405/GCA_001135405.1_8727_5_64	-	GCGS214
Streptococcus mutans B12Sm1	1225189	PRJNA173249	173249	Terrabacteria group	Firmicutes	2.17358	36.9	-	ALYQ01	91	2176	2039	1/24/14	3/24/17	Contig	New York University College of Dentistry	SAMN02641536	GCA_000522605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/605/GCA_000522605.1_out_k41_n4_samp03-contigs.fa	24291226	B12Sm1
Enterococcus faecalis EnGen0118	1157377	PRJNA88257	88257	Terrabacteria group	Firmicutes	2.95737	37.5	-	AISK01	10	2999	2853	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808942	GCA_000391725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/725/GCA_000391725.1_Ente_faec_UAA943_V1	-	UAA943
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	4.28199	27.9	-	LFPX01	66	4173	3973	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779971	GCA_001574125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/125/GCA_001574125.1_ASM157412v1	26939550	SU1072
Klebsiella pneumoniae subsp. pneumoniae LCT-KP214	1162297	PRJNA89611	89611	Proteobacteria	Gammaproteobacteria	5.79146	56.3	-	AJHE02	6	5941	5248	3/23/12	2/21/17	Scaffold	BGI	SAMN02469356	GCA_000255975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/975/GCA_000255975.2_ASM25597v2	25015528	LCT-KP214
Flavobacterium columnare	996	PRJNA358757	358757	FCB group	Bacteroidetes/Chlorobi group	3.03208	31.6	chromosome:NZ_CP018912.1/CP018912.1	-	1	2664	2509	1/5/17	4/6/17	Complete Genome	Shanghai Institute of Clinical Bioinformatics	SAMN06184581	GCA_001936395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/395/GCA_001936395.1_ASM193639v1	-	TC 1691
Vibrio parahaemolyticus S124	1394659	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.1398	45.2	-	AWJB01	697	4870	4650	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338973	GCA_000489955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/955/GCA_000489955.1_S124	-	S124
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.0201	38	-	MLPW01	454	2110	1830	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297142	GCA_001869305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/305/GCA_001869305.1_ASM186930v1	27118061	AWRIB949
Brucella abortus 87-0095	1328346	PRJNA200929	200929	Proteobacteria	Alphaproteobacteria	3.28658	57.2	-	ATGZ01	4	3380	3164	6/21/13	3/24/17	Contig	Broad Institute	SAMN02092509	GCA_000413615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/615/GCA_000413615.1_Bruc_abor_biovar_1_87-0095_V1	-	87-0095
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.8015	32.3	-	MRLE01	97	1876	1558	4/19/17	4/22/17	Scaffold	FOI Swedish Defence Research Agency	SAMN03773732	GCA_002100185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/185/GCA_002100185.1_ASM210018v1	28348839	F0781
Clostridioides difficile DA00211	1151346	PRJNA85867	85867	Terrabacteria group	Firmicutes	4.07276	28.3	-	AVJU01	90	3796	3616	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766665	GCA_000450445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/445/GCA_000450445.2_ASM45044v2	-	DA00211
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.01409	47.5	-	JSUC01	111	3825	3657	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104870	GCA_000788815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/815/GCA_000788815.1_ASM78881v1	25538191	2012HC-34
Bacillus thuringiensis serovar finitimus	29337	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.70438	35.3	-	NFCW01	69	6134	5771	5/17/17	6/15/17	Scaffold	Huazhong Agricultural University	SAMN05934512	GCA_002146625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/625/GCA_002146625.1_ASM214662v1	-	BGSC 4B2
Burkholderia pseudomallei MSHR2451	1435995	PRJNA231529	231529	Proteobacteria	Betaproteobacteria	7.28153	68.1	-	JQEG01	2	7517	6887	11/11/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02998028	GCA_000774815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/815/GCA_000774815.1_BPN	25676747	MSHR2451
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.65325	67.2	-	MUSK01	109	8205	7687	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001876	GCA_001993275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/275/GCA_001993275.1_ASM199327v1	-	VC9970
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.58825	50.8	-	FTUX01	346	5095	4388	1/28/17	2/26/17	Contig	SC	SAMEA2054566	GCA_900158245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/245/GCA_900158245.1_9803_4_21	-	2090STDY5461839
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.36294	38.3	-	FJES01	34	3093	2957	2/20/16	3/27/17	Contig	SC	SAMEA2065730	GCA_900049275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/275/GCA_900049275.1_10771_3_90	-	2531STDY5467467
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.24941	58.5	-	MTHR01	325	6088	5511	4/28/17	6/9/17	Contig	Massey University	SAMN06197056	GCA_002175065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/065/GCA_002175065.1_ASM217506v1	28369338	C18
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.16567	41	-	CEIG01	96	2154	1987	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234011	GCA_000938215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/215/GCA_000938215.1_Velvet_assembly	-	S14L
Streptococcus agalactiae FSL S3-170	1154792	PRJNA86175	86175	Terrabacteria group	Firmicutes	2.24851	35.5	-	ALQG01	103	2350	2085	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993311	GCA_000289835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/835/GCA_000289835.1_ASM28983v1	-	FSL S3-170
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	4.00039	38.9	-	JSDM01	56	3877	3734	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068190	GCA_000805275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/275/GCA_000805275.1_ASM80527v1	25487793	2011BJAB6
Pseudomonas aeruginosa BL18	1402559	PRJNA219921	219921	Proteobacteria	Gammaproteobacteria	6.51065	66.3	-	AXPI01	3	6188	6036	10/24/13	3/9/17	Scaffold	Broad Institute	SAMN02360731	GCA_000480785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/785/GCA_000480785.1_Pseu_aeru_BL18_V1	-	BL18
Shigella flexneri Shi06HN091	1434178	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.44196	50.5	-	AZQE01	299	4980	4240	1/29/14	2/23/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437413	GCA_000566505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/505/GCA_000566505.1_ASM56650v1	-	Shi06HN091
Francisella sp. TX077310	573570	PRJNA67141	67141	Proteobacteria	Gammaproteobacteria	2.23738	31.6	chromosome:NZ_CP016796.1/CP016796.1	-	1	2073	1992	12/9/16	4/17/17	Complete Genome	Los Alamos National Laboratory	SAMN05464625	GCA_001895265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/265/GCA_001895265.1_ASM189526v1	27881415	TX077310
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.81452	35	-	JQPY01	360	4435	3969	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949556	GCA_001568065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/065/GCA_001568065.1_ASM156806v1	26833181	56656
Streptococcus pyogenes ABC020041424	1439122	PRJNA233059	233059	Terrabacteria group	Firmicutes	1.7308	38.6	-	JJIJ01	8	1742	1627	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567408	GCA_000631365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/365/GCA_000631365.1_Stre_pyog_ABC020041424_V1	-	ABC020041424
Neisseria meningitidis 63006	1095665	PRJNA76261	76261	Proteobacteria	Betaproteobacteria	2.19794	51.8	-	ANSI01	24	2565	2182	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01054387	GCA_000327545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/545/GCA_000327545.2_ASM32754v2	-	63006
Helicobacter pylori GAM270ASi	1159051	PRJNA89273	89273	Proteobacteria	delta/epsilon subdivisions	1.64696	39.2	-	APEA01	43	1626	1447	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436696	GCA_000345545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/545/GCA_000345545.2_ASM34554v2	-	GAM270ASi
Streptococcus pneumoniae GA47751	760845	PRJNA48881	48881	Terrabacteria group	Firmicutes	2.16039	39.7	-	AGQD01	11	2376	2068	10/25/11	3/8/17	Contig	Institute for Genome Sciences	SAMN00792675	GCA_000233165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/165/GCA_000233165.2_ASM23316v2	-	GA47751
Wenyingzhuangia fucanilytica	1790137	PRJNA309604	309604	FCB group	Bacteroidetes/Chlorobi group	3.42706	31.6	chromosome:NZ_CP014224.1/CP014224.1	-	1	2854	2771	8/2/16	4/13/17	Complete Genome	Ocean University of China	SAMN04451729	GCA_001697185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/185/GCA_001697185.1_ASM169718v1	-	CZ1127
Mycobacterium tuberculosis PanR0501	1352570	PRJNA210047	210047	Terrabacteria group	Actinobacteria	4.40739	65.3994	chromosome:NZ_CM002127.1/CM002127.1	ATRP01	1	4313	4074	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471050	GCA_000445245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/245/GCA_000445245.1_fedora0501_IS	23884993	PanR0501
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.29412	69.1	-	LNBI01	266	5117	4656	4/4/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04226721	GCA_001609925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/925/GCA_001609925.1_ASM160992v1	-	MAH-P-10203-06
Bacillus cereus HuB4-4	1053211	PRJNA70387	70387	Terrabacteria group	Firmicutes	6.54416	35.1	-	AHEF01	16	6964	6413	5/16/13	3/24/17	Scaffold	Broad Institute	SAMN02596843	GCA_000399305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/305/GCA_000399305.1_Baci_cere_HuB4-4_V1	-	HuB4-4
Staphylococcus epidermidis	1282	PRJNA303132	303132	Terrabacteria group	Firmicutes	2.42924	31.9	-	LNSW01	61	2398	2290	12/4/15	3/27/17	Contig	Aarhus University	SAMN04286639	GCA_001457235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/235/GCA_001457235.1_ASM145723v1	26924200	AU24
Listeria monocytogenes Lm_1823	1425337	PRJNA229093	229093	Terrabacteria group	Firmicutes	3.05475	37.8	-	AZIU01	19	3130	3046	3/6/14	2/26/17	Scaffold	University of Milan	SAMN02412411	GCA_000585755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/755/GCA_000585755.1_Lm1823	24723720	Lm_1823
Yersinia pestis PY-96	992178	PRJNA64383	64383	Proteobacteria	Gammaproteobacteria	4.70612	47.5	-	AKTL01	580	4625	4237	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141499	GCA_000269145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/145/GCA_000269145.1_ASM26914v1	-	PY-96
Campylobacter jejuni subsp. doylei ATCC 49349	1408360	PRJNA223067	223067	Proteobacteria	delta/epsilon subdivisions	1.73427	30.5	-	JNJR01	45	1855	1603	6/11/14	4/17/17	Scaffold	DOE Joint Genome Institute	SAMN02841212	GCA_000701745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/745/GCA_000701745.1_ASM70174v1	-	ATCC 49349
Flavobacterium columnare	996	PRJNA321617	321617	FCB group	Bacteroidetes/Chlorobi group	3.17108	31.6	chromosome:NZ_CP016277.1/CP016277.1	-	1	2796	2635	6/30/16	4/5/17	Complete Genome	Huazhong Agricultural University	SAMN05000968	GCA_001677395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/395/GCA_001677395.1_ASM167739v1	-	Pf1
Mycoplasma gallisepticum VA94_7994-1-7P	1159197	PRJNA86093	86093	Terrabacteria group	Tenericutes	0.96411	31.6	chromosome:NC_018406.1/CP003506.1	-	1	798	736	8/10/12	3/30/17	Complete Genome	University of Connecticut	SAMN02604156	GCA_000286675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/675/GCA_000286675.1_ASM28667v1	22628486	VA94_7994-1-7P
Mycoplasma gallisepticum NC95_13295-2-2P	1159198	PRJNA86095	86095	Terrabacteria group	Tenericutes	0.953989	31.6	chromosome:NC_018407.1/CP003507.1	-	1	788	727	8/10/12	3/30/17	Complete Genome	University of Connecticut	SAMN02604157	GCA_000286695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/695/GCA_000286695.1_ASM28669v1	22628486	NC95_13295-2-2P
Mycoplasma gallisepticum NC96_1596-4-2P	1159199	PRJNA86097	86097	Terrabacteria group	Tenericutes	0.986257	31.6	chromosome:NC_018408.1/CP003508.1	-	1	807	745	8/10/12	3/30/17	Complete Genome	University of Connecticut	SAMN02604158	GCA_000286715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/715/GCA_000286715.1_ASM28671v1	22628486	NC96_1596-4-2P
Campylobacter jejuni CVM 41902	1440038	PRJNA232318	232318	Proteobacteria	delta/epsilon subdivisions	1.64857	30.7	-	JAKD01	509	1840	1475	10/29/15	4/10/17	Scaffold	FDA/CVM	SAMN02887129	GCA_001418855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/855/GCA_001418855.1_Campylobacter_jejuni_CVM_41902_v1.0	-	CVM 41902
Yersinia pestis PY-98	992179	PRJNA64385	64385	Proteobacteria	Gammaproteobacteria	4.78004	47.5	-	AKTM01	520	4645	4312	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141500	GCA_000269165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/165/GCA_000269165.1_ASM26916v1	-	PY-98
Listeria monocytogenes Lm_1824	1425338	PRJNA229093	229093	Terrabacteria group	Firmicutes	3.00496	37.8	-	AZIV01	27	3045	2972	3/6/14	2/26/17	Scaffold	University of Milan	SAMN02412412	GCA_000585775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/775/GCA_000585775.1_Lm1824	24723720	Lm_1824
Staphylococcus epidermidis	1282	PRJNA263222	263222	Terrabacteria group	Firmicutes	2.48148	31.9	-	JRVO01	85	2430	2292	12/11/15	3/27/17	Contig	CSIR-Institute of Microbial Technology	SAMN03097231	GCA_001465365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/465/365/GCA_001465365.1_ASM146536v1	26758912	SE4.6
Bacillus cereus BAG5X12-1	1053190	PRJNA70345	70345	Terrabacteria group	Firmicutes	5.72583	35	-	AHDK01	7	5990	5628	5/16/13	4/10/17	Scaffold	Broad Institute	SAMN02596822	GCA_000399325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/325/GCA_000399325.1_Baci_cere_BAG5X12-1_G13199_V1	-	BAG5X12-1
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.3668	69.1	-	LNBK01	340	5246	4674	4/4/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04226726	GCA_001609945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/945/GCA_001609945.1_ASM160994v1	-	MAH-E-3044
Mycobacterium tuberculosis PanR0503	1352571	PRJNA210048	210048	Terrabacteria group	Actinobacteria	4.38695	65.2993	chromosome:NZ_CM002126.1/CM002126.1	ATRQ01	1	4299	4051	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471074	GCA_000445265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/265/GCA_000445265.1_fedora0503_IS	23884993	PanR0503
Mycoplasma gallisepticum NY01_2001.047-5-1P	1159200	PRJNA86099	86099	Terrabacteria group	Tenericutes	0.965525	31.6	chromosome:NC_018409.1/CP003509.1	-	1	794	727	8/10/12	3/30/17	Complete Genome	University of Connecticut	SAMN02604159	GCA_000286735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/735/GCA_000286735.1_ASM28673v1	22628486	NY01_2001.047-5-1P
Streptococcus pneumoniae 5185-06	760868	PRJNA48929	48929	Terrabacteria group	Firmicutes	2.10874	39.9	-	AGQE01	15	2311	1984	10/25/11	3/9/17	Contig	Institute for Genome Sciences	SAMN00792732	GCA_000233185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/185/GCA_000233185.2_ASM23318v2	-	5185-06
Helicobacter pylori GAM42Ai	1159052	PRJNA89275	89275	Proteobacteria	delta/epsilon subdivisions	1.6188	39.3	-	APEB01	42	1594	1438	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436787	GCA_000345565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/565/GCA_000345565.2_ASM34556v2	-	GAM42Ai
Neisseria meningitidis NM3642	1095670	PRJNA76271	76271	Proteobacteria	Betaproteobacteria	2.21135	51.8	-	ANSD01	28	2572	2179	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055148	GCA_000327565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/565/GCA_000327565.2_ASM32756v2	-	NM3642
Streptococcus pyogenes ABC020057288	1439285	PRJNA233052	233052	Terrabacteria group	Firmicutes	1.80033	38.4	-	JJIK01	3	1839	1729	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567401	GCA_000631385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/385/GCA_000631385.1_Stre_pyog_ABC020057288_V1	-	ABC020057288
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.57561	35	-	JQQC01	216	4111	3733	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02947972	GCA_001568075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/075/GCA_001568075.1_ASM156807v1	26833181	56101
Mycoplasma gallisepticum WI01_2001.043-13-2P	1159201	PRJNA86103	86103	Terrabacteria group	Tenericutes	0.939844	31.6	chromosome:NC_018410.1/CP003510.1	-	1	780	717	8/10/12	3/30/17	Complete Genome	University of Connecticut	SAMN02604160	GCA_000286755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/755/GCA_000286755.1_ASM28675v1	22628486	WI01_2001.043-13-2P
Shigella flexneri Shi06AH091	1434179	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.4286	50.5	-	AZQF01	304	4972	4259	1/29/14	2/23/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437414	GCA_000566525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/525/GCA_000566525.1_ASM56652v1	-	Shi06AH091
Pseudomonas aeruginosa BL17	1402558	PRJNA219920	219920	Proteobacteria	Gammaproteobacteria	6.88466	66	-	AXPJ01	3	6533	6338	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360730	GCA_000480805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/805/GCA_000480805.1_Pseu_aeru_BL17_V1	-	BL17
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	4.10937	38.9	-	JRHV01	81	4013	3868	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068183	GCA_000805295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/295/GCA_000805295.1_ASM80529v1	25487793	2011BJAB1
Streptococcus agalactiae FSL S3-337	1154795	PRJNA86181	86181	Terrabacteria group	Firmicutes	2.10074	35.2	-	ALQH01	46	2176	2057	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991083	GCA_000289855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/855/GCA_000289855.1_ASM28985v1	-	FSL S3-337
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03136	41.3	-	CEJR01	68	2024	1930	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233971	GCA_000938415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/415/GCA_000938415.1_Velvet_assembly	-	S10A
Pseudomonas syringae pv. actinidiae	103796	PRJNA357960	357960	Proteobacteria	Gammaproteobacteria	6.02185	58.7	-	MSBW01	350	5768	5135	9/19/17	9/21/17	Contig	National Agriculture and Food Research Organization (NARO)	SAMN06162620	GCA_002310955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/955/GCA_002310955.1_ASM231095v1	-	MAFF 212134
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54157	38.3	-	FJLD01	62	3237	3090	2/20/16	3/27/17	Contig	SC	SAMEA2077982	GCA_900049285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/285/GCA_900049285.1_10625_3_54	-	2532STDY5467623
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.69091	50.8	-	FTUY01	345	5270	4536	1/28/17	2/26/17	Contig	SC	SAMEA2054567	GCA_900158255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/255/GCA_900158255.1_9803_4_22	-	2090STDY5461840
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.88484	67.2	-	MUSP01	114	8395	7859	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001881	GCA_001993295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/295/GCA_001993295.1_ASM199329v1	-	VC14636
Burkholderia pseudomallei MSHR332	1435983	PRJNA231470	231470	Proteobacteria	Betaproteobacteria	7.25679	68	-	JQFM01	4	7504	6800	11/11/14	4/10/17	Scaffold	Los Alamos National Laboratory	SAMN02999498	GCA_000774875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/875/GCA_000774875.1_BPC	25676747	MSHR332
Bacillus thuringiensis serovar muju	180899	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.74011	35.1	-	NFDF01	43	6101	5708	5/17/17	6/15/17	Scaffold	Huazhong Agricultural University	SAMN05934521	GCA_002146705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/705/GCA_002146705.1_ASM214670v1	-	BGSC 4BL1
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.01233	47.5	-	JSTZ01	113	3809	3649	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104867	GCA_000788835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/835/GCA_000788835.1_ASM78883v1	25538191	2012HC-31
Clostridioides difficile DA00212	1151347	PRJNA85869	85869	Terrabacteria group	Firmicutes	4.14955	28.2	-	AVJV01	89	3898	3721	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766666	GCA_000450465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/465/GCA_000450465.2_ASM45046v2	-	DA00212
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.86333	32.3	-	MRLI01	168	2035	1571	4/19/17	4/22/17	Scaffold	FOI Swedish Defence Research Agency	SAMN03773725	GCA_002100195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/195/GCA_002100195.1_ASM210019v1	28348839	F0624
Brucella abortus 90-0962	1328349	PRJNA200932	200932	Proteobacteria	Alphaproteobacteria	3.28592	57.2	-	ATGW01	4	3380	3151	6/21/13	3/24/17	Contig	Broad Institute	SAMN02092512	GCA_000413635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/635/GCA_000413635.1_Bruc_abor_biovar_1_90-0962_V1	-	90-0962
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.9908	38	-	MLPY01	315	2050	1804	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297144	GCA_001869325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/325/GCA_001869325.1_ASM186932v1	27118061	AWRIB984
Vibrio parahaemolyticus S123	1394658	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.07088	45.3	-	AWJC01	748	4836	4605	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338972	GCA_000489975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/975/GCA_000489975.1_S123	-	S123
Mycoplasma gallisepticum NC06_2006.080-5-2P	1159202	PRJNA86105	86105	Terrabacteria group	Tenericutes	0.938869	31.6	chromosome:NC_018411.1/CP003511.1	-	1	777	711	8/10/12	3/30/17	Complete Genome	University of Connecticut	SAMN02604161	GCA_000286775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/775/GCA_000286775.1_ASM28677v1	22628486	NC06_2006.080-5-2P
Klebsiella pneumoniae subsp. pneumoniae WGLW1	1203544	PRJNA169453	169453	Proteobacteria	Gammaproteobacteria	5.54833	57.2	-	AMLL01	5	5527	5302	9/18/12	2/21/17	Scaffold	Broad Institute	SAMN02463956	GCA_000300655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/655/GCA_000300655.1_Kleb_pneu_WGLW1_V1	-	WGLW1
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	4.36891	27.9	-	LFPY01	139	4257	4027	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779972	GCA_001574135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/135/GCA_001574135.1_ASM157413v1	26939550	SU1064
Enterococcus faecalis EnGen0332	1169251	PRJNA158755	158755	Terrabacteria group	Firmicutes	3.3	37.2	-	ASEN01	28	3419	3229	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00839771	GCA_000392675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/675/GCA_000392675.1_Ente_faec_SF350_V1	-	SF350
Streptococcus mutans B084SM-A	1225190	PRJNA173250	173250	Terrabacteria group	Firmicutes	2.04821	36.9	-	ALYR01	61	2053	1911	1/24/14	3/24/17	Contig	New York University College of Dentistry	SAMN02641537	GCA_000522625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/625/GCA_000522625.1_out_k35_n4_samp04-contigs.fa	24291226	B084SM-A
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14504	52.4	-	CQIV01	79	2498	2185	3/22/15	4/10/17	Contig	SC	SAMEA1690480	GCA_001138665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/665/GCA_001138665.1_8727_8_9	-	GCGS105
Enterococcus faecium EnGen0129	1157423	PRJNA88273	88273	Terrabacteria group	Firmicutes	2.55774	38.3	-	AISS01	8	2610	2374	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808951	GCA_000391885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/885/GCA_000391885.1_Ente_faec_7330884-2_V1	-	7330884-2
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.16129	41.2	-	CWGE01	94	2109	1912	6/23/15	3/26/17	Contig	SC	SAMEA1032937	GCA_001177945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/945/GCA_001177945.1_6817_2_78	-	EQUI0031
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.28436	66.5	-	DBEN01	87	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453940	GCA_002294505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/505/GCA_002294505.1_ASM229450v1	28894102	-
Brucella melitensis	29459	PRJNA239191	239191	Proteobacteria	Alphaproteobacteria	3.28052	57.2	-	JFAT01	56	3316	2815	6/12/14	6/12/14	Contig	"The Federal Goverment Health Institution ""Stavropol Plague Control Reseach Institute"" of the Federal Service for Supervision in the Sphere of Consumer Rights Protection and Human Welfare"	SAMN02650270	GCA_000705115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/115/GCA_000705115.1_Brucella_melitensis_C-555	-	C-555
Mycoplasma gallisepticum CA06_2006.052-5-2P	1159203	PRJNA86107	86107	Terrabacteria group	Tenericutes	0.976412	31.6	chromosome:NC_018412.1/CP003512.1	-	1	799	732	8/10/12	3/30/17	Complete Genome	University of Connecticut	SAMN02604162	GCA_000286795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/795/GCA_000286795.1_ASM28679v1	22628486	CA06_2006.052-5-2P
Corynebacterium diphtheriae bv. belfanti	2014537	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.39274	53.6	-	LSWZ01	58	2306	2110	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497023	GCA_002203655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/655/GCA_002203655.1_S85	-	5130
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.57831	46.8	-	CTQW01	87	4330	4080	3/26/15	3/26/17	Scaffold	SC	SAMEA980141	GCA_001222745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/745/GCA_001222745.1_4976_1_10	-	YE232/02
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.28967	59.9	-	FCJB01	23	5051	4870	1/21/16	3/27/17	Scaffold	SC	SAMEA2273988	GCA_001537125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/125/GCA_001537125.1_12082_3_20	-	2880STDY5682916
Lactobacillus plantarum	1590	PRJNA283610	283610	Terrabacteria group	Firmicutes	3.10545	45.1	-	LEAZ01	65	3016	2832	12/3/16	3/28/17	Contig	"Faculty of Agro-industry, Prince of Songkla University, wageningen university"	SAMN03654503	GCA_001888675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/675/GCA_001888675.1_ASM188867v1	-	CIF17AN8
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.7036	31.4	-	LBEG01	196	1765	1620	10/27/15	3/18/17	Contig	FDA	SAMN03344558	GCA_001417245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/245/GCA_001417245.1_ASM141724v1	-	CVM N49244
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.51219	32.6	-	CUFE01	114	2503	2373	3/31/15	3/26/17	Scaffold	SC	SAMEA1035079	GCA_001238045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/045/GCA_001238045.1_7068_7_11	-	6249
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.95998	55	-	JYLW01	92	4935	4676	3/13/15	3/25/17	Scaffold	University of Minnesota	SAMN03333147	GCA_000952665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/665/GCA_000952665.1_ASM95266v1	26438492	MNCRE6
Cronobacter sakazakii	28141	PRJNA258403	258403	Proteobacteria	Gammaproteobacteria	4.56956	56.8	-	NIXM01	22	4445	4274	6/19/17	6/22/17	Scaffold	FDA/CFSAN	SAMN07229642	GCA_002200235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/235/GCA_002200235.1_ASM220023v1	-	MOD1_5-21G
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.20182	64.1	-	FVBV01	5	5313	5141	3/10/17	3/18/17	Contig	SC	SAMEA2070838	GCA_900130745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/745/GCA_900130745.1_10665_3_22	-	192
Acinetobacter pittii	48296	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.80872	38.5	-	DHAM01	34	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455157	GCA_002397425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/425/GCA_002397425.1_ASM239742v1	28894102	-
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.52372	64.1	-	DGLL01	32	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453818	GCA_002387945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/945/GCA_002387945.1_ASM238794v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.37916	67.2	-	LPER01	124	6681	6301	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449465	GCA_001529985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/985/GCA_001529985.1_ASM152998v1	-	MSMB1304WGS
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.00092	54.9	-	LPQT01	82	5004	4740	12/21/15	3/27/17	Contig	JCVI	SAMN04252888	GCA_001471935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/935/GCA_001471935.1_SMART_264.v1	-	SMART_264
Pseudomonas sp. PH1b	1397282	PRJNA226214	226214	Proteobacteria	Gammaproteobacteria	7.43014	62.9	-	AYMU01	89	6739	6519	4/18/14	4/9/17	Contig	University of Malaya	SAMN02729860	GCA_000633395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/395/GCA_000633395.1_de_novo	-	PH1b
Streptomyces sp. NRRL WC-3626	1463926	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.91556	71.5	-	JOCA01	93	7114	6814	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645407	GCA_000718785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/785/GCA_000718785.1_ASM71878v1	-	NRRL WC-3626
Bacillus sp. VT-16-64	1917019	PRJNA351905	351905	Terrabacteria group	Firmicutes	4.83139	42.7	-	MSRF01	352	4668	4297	2/4/17	4/17/17	Contig	Human Microbiology Institute	SAMN05957817	GCA_001989355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/989/355/GCA_001989355.1_ASM198935v1	-	VT-16-64
Acinetobacter sp. ANC 4648	1977875	PRJNA380882	380882	Proteobacteria	Gammaproteobacteria	3.09471	37.6	-	NEGI01	14	2945	2792	5/15/17	5/23/17	Contig	National Institute of Public Health	SAMN06641963	GCA_002135345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/345/GCA_002135345.1_ASM213534v1	-	ANC 4648
Clostridium sp. CAG:813	1262843	PRJEB1014	206853	Terrabacteria group	Firmicutes	1.9154	32.1	-	CBKA01	76	1865	1828	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138787	GCA_000438055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/055/GCA_000438055.1_MGS813	-	-
Staphylococcus sp. HMSC070A02	1739523	PRJNA300174	300174	Terrabacteria group	Firmicutes	2.67611	35.9	-	LTNK01	81	2591	2455	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498699	GCA_001838485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/485/GCA_001838485.1_ASM183848v1	-	HMSC070A02
Streptococcus sp. DORA_10	1403937	PRJNA221496	221496	Terrabacteria group	Firmicutes	1.91335	39.9	-	AZMH01	416	2109	2109	12/16/13	12/16/13	Contig	"University of California, Berkeley"	SAMN02316559	GCA_000508605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/605/GCA_000508605.1_Strp_DORA_10_velvet_1.1	-	-
Mycobacterium sp. 1165178.9	1834070	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.35529	66.6	-	LZMB01	599	5286	4615	6/17/16	4/13/17	Contig	JCVI	SAMN04634190	GCA_001673555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/555/GCA_001673555.1_ASM167355v1	-	1165178.9
Mycobacterium sp. 1245499.0	1834074	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.65205	67.9	-	LZMG01	445	5582	5008	6/17/16	4/13/17	Contig	JCVI	SAMN04634184	GCA_001673615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/615/GCA_001673615.1_ASM167361v1	-	1245499
Streptococcus sp. DBCMS	1604598	PRJNA272616	272616	Terrabacteria group	Firmicutes	2.01817	40.8	-	JXRG01	158	-	-	2/2/15	2/2/15	Contig	FDA	SAMN03284399	GCA_000831085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/085/GCA_000831085.1_ASM83108v1	-	DBCMS
Staphylococcus sp. HMSC070A03	1739302	PRJNA299952	299952	Terrabacteria group	Firmicutes	2.67572	35.9	-	LTNJ01	55	2591	2465	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498678	GCA_001838525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/525/GCA_001838525.1_ASM183852v1	-	HMSC070A03
Clostridium sp. CAG:609	1262827	PRJEB957	206882	Terrabacteria group	Firmicutes	1.15532	26.6	-	CBKL01	39	1226	1196	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138788	GCA_000438075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/075/GCA_000438075.1_MGS609	-	-
Acinetobacter sp. ANC 4169	1977879	PRJNA380882	380882	Proteobacteria	Gammaproteobacteria	3.22825	41.5	-	NEGE01	33	3095	2929	5/15/17	5/23/17	Contig	National Institute of Public Health	SAMN06641967	GCA_002135355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/355/GCA_002135355.1_ASM213535v1	-	ANC 4169
Bacillus sp. JEM-1	1977090	PRJNA335430	335430	Terrabacteria group	Firmicutes	5.43853	35.7	-	NCLG01	705	5761	5425	5/19/17	6/19/17	Contig	NBACC	SAMN05442528	GCA_002150025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/025/GCA_002150025.1_ASM215002v1	-	JEM-1
Streptomyces sp. NRRL WC-3703	1463930	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.58818	71.9	-	JOCH01	187	8446	8014	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645414	GCA_000718815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/815/GCA_000718815.1_ASM71881v1	-	NRRL WC-3703
Pseudomonas sp. RL	1452718	PRJNA236066	236066	Proteobacteria	Gammaproteobacteria	3.81316	65.6	-	JBOY01	228	3633	3431	4/23/14	4/9/17	Contig	"University of Delhi, North Campus"	SAMN02732396	GCA_000647775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/775/GCA_000647775.1_Pseudomonas_RL	25898829	RL
Enterobacter hormaechei	158836	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.11541	54.9	-	LPQS01	75	5079	4816	12/21/15	3/27/17	Contig	JCVI	SAMN04252889	GCA_001471955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/955/GCA_001471955.1_SMART_266.v1	-	SMART_266
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.46497	67.2	-	LPFE01	88	6803	6452	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449478	GCA_001530165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/165/GCA_001530165.1_ASM153016v1	-	MSMB1346WGS
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.54492	64.2	-	DGLT01	29	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451046	GCA_002388065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/065/GCA_002388065.1_ASM238806v1	28894102	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21366	64.1	-	FVBX01	11	5329	5152	3/10/17	3/18/17	Contig	SC	SAMEA2071289	GCA_900130755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/755/GCA_900130755.1_10665_3_23	-	193
Cronobacter sakazakii	28141	PRJNA247765	247765	Proteobacteria	Gammaproteobacteria	4.48713	56.1	-	JNBH01	321	-	-	1/25/17	1/25/17	Scaffold	"Nottingham Trent University, UK"	SAMN02780899	GCA_001971125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/125/GCA_001971125.1_ASM197112v1	-	20
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.94931	55	-	JYLZ01	96	4934	4658	3/13/15	3/25/17	Scaffold	University of Minnesota	SAMN03333150	GCA_000952675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/675/GCA_000952675.1_ASM95267v1	26438492	MNCRE18
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.50388	32.6	-	CUEM01	75	2457	2336	3/31/15	4/21/17	Scaffold	SC	SAMEA1035144	GCA_001238085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/085/GCA_001238085.1_7067_4_77	-	s5
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.76213	31.3	-	LBEE01	43	1849	1750	10/27/15	3/18/17	Contig	FDA	SAMN03344560	GCA_001417255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/255/GCA_001417255.1_ASM141725v1	-	CVM N51619
Lactobacillus plantarum	1590	PRJNA283610	283610	Terrabacteria group	Firmicutes	3.22302	44.4	-	LEAW01	57	3140	2987	12/3/16	3/28/17	Contig	"Faculty of Agro-industry, Prince of Songkla University, wageningen university"	SAMN03654487	GCA_001888725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/725/GCA_001888725.1_ASM188872v1	-	TISTR875
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.36815	59.7	-	FCGD01	19	5087	4920	1/21/16	3/27/17	Scaffold	SC	SAMEA2273892	GCA_001537145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/145/GCA_001537145.1_12082_2_28	-	2880STDY5682819
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.72656	47.1	-	CTKQ01	62	4406	4214	3/26/15	3/26/17	Scaffold	SC	SAMEA980167	GCA_001222805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/805/GCA_001222805.1_4976_1_1	-	YE09/03
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.45948	53.5	-	LSXI01	25	2385	2206	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496998	GCA_002203665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/665/GCA_002203665.1_S94	-	4525
Mycoplasma gallisepticum NC08_2008.031-4-3P	1159204	PRJNA86109	86109	Terrabacteria group	Tenericutes	0.92665	31.6	chromosome:NC_018413.1/CP003513.1	-	1	772	706	8/10/12	3/30/17	Complete Genome	University of Connecticut	SAMN02604163	GCA_000286815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/815/GCA_000286815.1_ASM28681v1	22628486	NC08_2008.031-4-3P
Brucella melitensis	29459	PRJNA244608	244608	Proteobacteria	Alphaproteobacteria	3.27899	57.2	-	JJOF01	68	3088	2630	6/27/14	6/27/14	Contig	"The Federal Goverment Health Institution ""Stavropol Plague Control Reseach Institute"" of the Federal Service for Supervision in the Sphere of Consumer Rights Protection and Human Welfare"	SAMN02727742	GCA_000714755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/755/GCA_000714755.1_Brucella_melitensis_C-558	-	C-558
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.4705	66.4	-	DBIK01	80	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451071	GCA_002296355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/355/GCA_002296355.1_ASM229635v1	28894102	-
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.17509	41.1	-	CVZV01	82	2134	1950	6/24/15	3/26/17	Contig	SC	SAMEA1032939	GCA_001177965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/965/GCA_001177965.1_6903_2_2	-	EQUI0052
Enterococcus faecium EnGen0134	1157424	PRJNA88275	88275	Terrabacteria group	Firmicutes	2.59812	38.3	-	AIST01	9	2643	2423	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808952	GCA_000391905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/905/GCA_000391905.1_Ente_faec_7430166-3_V1	-	7430166-3
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.1429	52.4	-	CQJC01	83	2511	2179	3/23/15	4/11/17	Contig	SC	SAMEA1690387	GCA_001140325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/325/GCA_001140325.1_8289_2_7	-	GCGS007
Streptococcus mutans B107SM-B	1225191	PRJNA173251	173251	Terrabacteria group	Firmicutes	2.10271	36.8	-	ALYS01	57	2093	1968	1/24/14	3/24/17	Contig	New York University College of Dentistry	SAMN02641538	GCA_000522645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/645/GCA_000522645.1_out_k29_n4_samp05-contigs.fa	24291226	B107SM-B
Enterococcus faecalis EnGen0341	1169280	PRJNA157729	157729	Terrabacteria group	Firmicutes	3.24386	37.5	-	ASCU01	28	3369	3165	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847596	GCA_000392755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/755/GCA_000392755.1_Ente_faec_SF6375_V1	-	SF6375
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	4.49554	27.9	-	LFRA01	204	4432	4178	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779983	GCA_001574175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/175/GCA_001574175.1_ASM157417v1	26939550	SU1169
Klebsiella pneumoniae subsp. pneumoniae WGLW2	1203545	PRJNA169454	169454	Proteobacteria	Gammaproteobacteria	5.746	56.8	-	AMLM01	3	5698	5414	9/18/12	2/21/17	Scaffold	Broad Institute	SAMN02463957	GCA_000300675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/675/GCA_000300675.1_Kleb_pneu_WGLW2_V1	-	WGLW2
Methanothermus fervidus DSM 2088	523846	PRJNA33689	33689	Euryarchaeota	Methanobacteria	1.24334	31.6	chromosome:NC_014658.1/CP002278.1	-	1	1358	1296	11/5/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02232040	GCA_000166095.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/095/GCA_000166095.1_ASM16609v1	21304736	DSM 2088
Vibrio parahaemolyticus S122	1394657	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.08774	45.3	-	AWJD01	738	4851	4620	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338971	GCA_000489995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/489/995/GCA_000489995.1_S122	-	S122
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.01746	38.2	-	MLNJ01	491	2043	1776	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297075	GCA_001869365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/365/GCA_001869365.1_ASM186936v1	27118061	AWRIB442
Brucella abortus 90-0742	1328350	PRJNA200933	200933	Proteobacteria	Alphaproteobacteria	3.2833	57.2	-	ATGV01	5	3377	3151	6/21/13	3/24/17	Contig	Broad Institute	SAMN02092513	GCA_000413655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/655/GCA_000413655.1_Bruc_abor_biovar_1_90-0742_V1	-	90-0742
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.90937	32.3	-	MRJQ01	95	2015	1553	4/19/17	4/22/17	Scaffold	FOI Swedish Defence Research Agency	SAMN03773988	GCA_002100255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/255/GCA_002100255.1_ASM210025v1	28348839	FSC247
Clostridioides difficile DA00215	1151348	PRJNA85871	85871	Terrabacteria group	Firmicutes	3.98468	28.4	-	AVJW01	110	3722	3543	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766667	GCA_000450485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/485/GCA_000450485.2_ASM45048v2	-	DA00215
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.01478	47.5	-	JSTK01	126	3820	3642	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104878	GCA_000788855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/855/GCA_000788855.1_ASM78885v1	25538191	2012Env-94
Bacillus thuringiensis serovar poloniensis	180894	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.5095	35	-	NFDJ01	153	6942	6436	5/17/17	5/24/17	Scaffold	Huazhong Agricultural University	SAMN05934526	GCA_002146785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/785/GCA_002146785.1_ASM214678v1	-	BGSC 4BR1
Burkholderia pseudomallei MSHR640	1437005	PRJNA231858	231858	Proteobacteria	Betaproteobacteria	7.20494	68.1	-	JQFP01	1	7382	6718	11/11/14	4/10/17	Scaffold	Los Alamos National Laboratory	SAMN02999501	GCA_000774885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/885/GCA_000774885.1_BPX	25676747	MSHR640
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.45246	67	-	MUVO01	156	8141	7613	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001977	GCA_001993315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/315/GCA_001993315.1_ASM199331v1	-	VC13356
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.59206	50.7	-	FTUZ01	343	5146	4393	1/28/17	3/2/17	Contig	SC	SAMEA2054569	GCA_900158275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/275/GCA_900158275.1_9803_4_24	-	2090STDY5461842
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54046	38.3	-	FJLF01	62	3234	3088	2/20/16	3/27/17	Contig	SC	SAMEA2080790	GCA_900049295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/295/GCA_900049295.1_10625_3_53	-	2532STDY5467622
Pseudomonas syringae pv. actinidiae	103796	PRJNA357961	357961	Proteobacteria	Gammaproteobacteria	6.03339	58.7	-	MSBX01	334	5810	5136	9/19/17	9/21/17	Contig	National Agriculture and Food Research Organization (NARO)	SAMN06162621	GCA_002310965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/965/GCA_002310965.1_ASM231096v1	-	MAFF 212141
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.22158	40.9	-	CEDF01	111	2196	2045	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233891	GCA_000938455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/455/GCA_000938455.1_Velvet_assembly	-	LS1B
Streptococcus agalactiae FSL F2-343	1154800	PRJNA86191	86191	Terrabacteria group	Firmicutes	2.12763	35.4	-	ALQI01	17	2189	2089	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991077	GCA_000289875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/875/GCA_000289875.1_ASM28987v1	-	FSL F2-343
Acinetobacter baumannii	470	PRJNA261018	261018	Proteobacteria	Gammaproteobacteria	4.02885	38.9	-	JRHW01	75	3923	3784	12/19/14	3/16/17	Scaffold	Peking University People's Hospital	SAMN03068184	GCA_000805305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/305/GCA_000805305.1_ASM80530v1	25487793	2011BJAB2
Pseudomonas aeruginosa BL16	1402557	PRJNA219919	219919	Proteobacteria	Gammaproteobacteria	6.80939	66	-	AXPK01	10	6514	6337	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360729	GCA_000480825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/825/GCA_000480825.1_Pseu_aeru_BL16_V1	-	BL16
Shigella flexneri 2001025	1434180	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.42987	50.5	-	AZQG01	300	4861	4218	1/29/14	2/23/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437415	GCA_000566545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/545/GCA_000566545.1_ASM56654v1	-	2001025
Rickettsia bellii OSU 85-389	391896	PRJNA17237	17237	Proteobacteria	Alphaproteobacteria	1.52898	31.6	chromosome:NC_009883.1/CP000849.1	-	1	1554	1383	10/2/07	4/6/17	Complete Genome	University of Iowa	SAMN02604191	GCA_000018245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/245/GCA_000018245.1_ASM1824v1	-	OSU 85-389
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.68977	35	-	JQQD01	304	4252	3824	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949511	GCA_001568105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/105/GCA_001568105.1_ASM156810v1	26833181	56104
Streptococcus pyogenes ABC020051161	1439196	PRJNA233042	233042	Terrabacteria group	Firmicutes	1.83117	38.5	-	JJIL01	2	1879	1759	4/14/14	4/10/17	Scaffold	Broad Institute	SAMN02567391	GCA_000631405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/405/GCA_000631405.1_Stre_pyog_ABC020051161_V1	-	ABC020051161
Neisseria meningitidis 97020	1095673	PRJNA76277	76277	Proteobacteria	Betaproteobacteria	2.19906	51.8	-	ANSA01	25	2547	2173	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055151	GCA_000327585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/585/GCA_000327585.2_ASM32758v2	-	97020
Helicobacter pylori GAM71Ai	1159053	PRJNA89277	89277	Proteobacteria	delta/epsilon subdivisions	1.60045	39.3	-	APEC01	70	1592	1412	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436697	GCA_000345585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/585/GCA_000345585.2_ASM34558v2	-	GAM71Ai
Streptococcus pneumoniae NP112	760882	PRJNA48957	48957	Terrabacteria group	Firmicutes	2.07232	39.8	-	AGQF01	9	2251	1982	10/25/11	3/9/17	Contig	Institute for Genome Sciences	SAMN00792701	GCA_000233205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/205/GCA_000233205.2_ASM23320v2	-	NP112
Candidatus Vesicomyosocius okutanii HA	412965	PRJDA18267	18267	Proteobacteria	Gammaproteobacteria	1.02215	31.6	chromosome:NC_009465.1/AP009247.1	-	1	994	951	5/9/07	4/17/17	Complete Genome	Japan Agency for Maine-Earth Science and Technology	SAMD00060908	GCA_000010405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/405/GCA_000010405.1_ASM1040v1	"1,749,381,221,966,990"	HA
Mycobacterium tuberculosis PanR0505	1352572	PRJNA210049	210049	Terrabacteria group	Actinobacteria	4.40788	65.3488	chromosome:NZ_CM002125.1/CM002125.1	ATRR01	1	4321	4060	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471058	GCA_000445285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/285/GCA_000445285.1_fedora0505_IS	23884993	PanR0505
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.28335	69.1	-	LNBJ01	219	5062	4615	4/4/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04226724	GCA_001609975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/975/GCA_001609975.1_ASM160997v1	-	MAH-E-2514
Bacillus cereus BMG1.7	1053196	PRJNA70357	70357	Terrabacteria group	Firmicutes	6.49649	35	-	AHDQ01	39	6838	6356	5/16/13	3/24/17	Scaffold	Broad Institute	SAMN02596828	GCA_000399345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/345/GCA_000399345.1_Baci_cere_BMG1_7_V1	-	BMG1.7
Staphylococcus epidermidis	1282	PRJNA263221	263221	Terrabacteria group	Firmicutes	2.5041	31.9	-	JRVN01	38	2470	2322	12/11/15	3/27/17	Contig	CSIR-Institute of Microbial Technology	SAMN03097230	GCA_001465375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/465/375/GCA_001465375.1_ASM146537v1	26758912	SE2.9
Listeria monocytogenes Lm_1840	1425336	PRJNA229093	229093	Terrabacteria group	Firmicutes	2.99882	37.8	-	AZIW01	16	3071	3001	3/6/14	2/26/17	Scaffold	University of Milan	SAMN02412397	GCA_000585795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/795/GCA_000585795.1_Lm1840	24723720	Lm_1840
Yersinia pestis PY-99	992180	PRJNA64387	64387	Proteobacteria	Gammaproteobacteria	4.66228	47.5	-	AKTN01	519	4590	4214	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141501	GCA_000269185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/185/GCA_000269185.1_ASM26918v1	-	PY-99
Campylobacter jejuni CVM 41974	1440063	PRJNA232336	232336	Proteobacteria	delta/epsilon subdivisions	1.67714	30.5	-	JAKS01	61	1753	1655	10/29/15	3/18/17	Scaffold	FDA/CVM	SAMN02887144	GCA_001419505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/505/GCA_001419505.1_Campylobacter_jejuni_CVM_41974_v1.0	-	CVM 41974
Rickettsia bellii RML369-C	336407	PRJNA13996	13996	Proteobacteria	Alphaproteobacteria	1.52208	31.6	chromosome:NC_007940.1/CP000087.1	-	1	1537	1398	4/5/06	4/6/17	Complete Genome	CNRS	SAMN02603144	GCA_000012385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/385/GCA_000012385.1_ASM1238v1	16703114	RML369-C
Nanoarchaeum equitans Kin4-M	228908	PRJNA9599	9599	DPANN group	Nanoarchaeota	0.490885	31.6	chromosome:AE017199.1	-	1	553	536	12/18/03	1/30/14	Complete Genome	DIVERSA	SAMN02603208	GCA_000008085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/085/GCA_000008085.1_ASM808v1	-	-
Methanocaldococcus vulcanius M7	579137	PRJNA33047	33047	Euryarchaeota	Methanococci	1.76174	31.5862	chromosome:NC_013407.1/CP001787.1; plasmid pMETVU01:NC_013408.1/CP001788.1; plasmid pMETVU02:NC_013409.1/CP001789.1	-	3	1760	1695	10/15/09	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598493	GCA_000024625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/625/GCA_000024625.1_ASM2462v1	-	M7
Candidatus Baumannia cicadellinicola	186490	PRJNA255334	255334	Proteobacteria	Gammaproteobacteria	0.636137	31.5384	chromosome:NZ_CP011787.1/CP011787.1; plasmid unnamed:NZ_CP011788.1/CP011788.1	-	2	589	521	8/18/15	4/10/17	Complete Genome	University of Texas at Austin	SAMN03757698	GCA_001269425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/425/GCA_001269425.1_ASM126942v1	-	B-GSS
Campylobacter jejuni	197	PRJNA295062	295062	Proteobacteria	delta/epsilon subdivisions	1.82106	30.2	-	LLWL01	69	1953	1786	10/29/15	3/18/17	Scaffold	Monash University	SAMN04159476	GCA_001420435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/435/GCA_001420435.1_ASM142043v1	27151799	2865
Yersinia pestis PY-100	992181	PRJNA64389	64389	Proteobacteria	Gammaproteobacteria	4.63176	47.6	-	AKTO01	491	4508	4176	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141502	GCA_000269205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/205/GCA_000269205.1_ASM26920v1	-	PY-100
Listeria monocytogenes Lm_1886	1425339	PRJNA229093	229093	Terrabacteria group	Firmicutes	3.01578	37.9	-	AZIX01	31	3030	2947	3/6/14	2/26/17	Scaffold	University of Milan	SAMN02412413	GCA_000585815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/815/GCA_000585815.1_Lm1886	24723720	Lm_1886
Staphylococcus epidermidis	1282	PRJNA263223	263223	Terrabacteria group	Firmicutes	2.48913	31.9	-	JRVP01	77	2477	2301	12/11/15	3/27/17	Contig	CSIR-Institute of Microbial Technology	SAMN03097232	GCA_001465385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/465/385/GCA_001465385.1_ASM146538v1	26758912	SE4.7
Bacillus cereus HuB13-1	1053208	PRJNA70381	70381	Terrabacteria group	Firmicutes	6.72989	35	-	AHEC01	48	7070	6554	5/16/13	3/24/17	Scaffold	Broad Institute	SAMN02596840	GCA_000399365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/365/GCA_000399365.1_Baci_cere_HuB13-1_V1	-	HuB13-1
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.56185	68.9	-	LNBL01	278	5394	4854	4/4/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04226727	GCA_001609985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/985/GCA_001609985.1_ASM160998v1	-	MAH-P-528-08
Mycobacterium tuberculosis PanR0601	1352573	PRJNA210050	210050	Terrabacteria group	Actinobacteria	4.38887	64.9464	chromosome:NZ_CM002124.1/CM002124.1	ATRS01	1	4328	3681	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471075	GCA_000445305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/305/GCA_000445305.1_fedora0601c_IS	23884993	PanR0601
Thermosipho sp. 1063	1462747	PRJNA231770	231770	Thermotogae	Thermotogae	1.76663	31.5	chromosome:NZ_CP007223.1/CP007223.1	-	1	1800	1720	1/10/17	4/16/17	Complete Genome	University of Oslo	SAMN02644973	GCA_001941365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/365/GCA_001941365.1_ASM194136v1	-	1063
Streptococcus pneumoniae 3063-00	760876	PRJNA48945	48945	Terrabacteria group	Firmicutes	2.07252	39.8	-	AGQG01	9	2260	1964	10/25/11	3/9/17	Contig	Institute for Genome Sciences	SAMN00792655	GCA_000233225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/225/GCA_000233225.2_ASM23322v2	-	3063-00
Helicobacter pylori GAM80Ai	1159054	PRJNA89279	89279	Proteobacteria	delta/epsilon subdivisions	1.63717	39.2	-	APED01	43	1597	1441	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436698	GCA_000345605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/605/GCA_000345605.2_ASM34560v2	-	GAM80Ai
Neisseria meningitidis 96023	1095676	PRJNA76283	76283	Proteobacteria	Betaproteobacteria	2.2096	51.8	-	ANRX01	23	2572	2184	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055155	GCA_000327605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/605/GCA_000327605.2_ASM32760v2	-	96023
Streptococcus pyogenes ABC020056020	1439259	PRJNA233031	233031	Terrabacteria group	Firmicutes	1.84677	38.6	-	JJIM01	1	1893	1756	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567380	GCA_000631425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/425/GCA_000631425.1_Stre_pyog_ABC020056020_V1	-	ABC020056020
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.76335	35	-	JQQE01	347	4421	3957	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949512	GCA_001568125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/125/GCA_001568125.1_ASM156812v1	26833181	56121
Thermosipho sp. 1070	1437364	PRJNA231770	231770	Thermotogae	Thermotogae	1.78185	31.5	chromosome:NZ_CP007121.1/CP007121.1	-	1	1815	1735	7/8/16	6/22/17	Complete Genome	University of Oslo	SAMN02444753	GCA_001682135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/135/GCA_001682135.1_ASM168213v1	-	1070
Shigella flexneri 2001027	1434181	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.41885	50.5	-	AZQH01	294	4870	4207	1/29/14	2/23/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437416	GCA_000566565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/565/GCA_000566565.1_ASM56656v1	-	2001027
Pseudomonas aeruginosa BL15	1402556	PRJNA219918	219918	Proteobacteria	Gammaproteobacteria	6.3128	66.5	-	AXPL01	9	5939	5784	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360728	GCA_000480845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/845/GCA_000480845.1_Pseu_aeru_BL15_V1	-	BL15
Acinetobacter baumannii	470	PRJNA266876	266876	Proteobacteria	Gammaproteobacteria	4.09185	38.9	-	JTEC01	83	4043	3751	1/22/15	3/16/17	Scaffold	University of Puerto Rico-Medical Sciences Campus	SAMN03175026	GCA_000876445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/445/GCA_000876445.1_ASM87644v1	25858845	M3AC9-7
Streptococcus agalactiae BSU247	1154827	PRJNA86305	86305	Terrabacteria group	Firmicutes	2.09197	35.2	-	ALRE01	17	2145	2017	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991115	GCA_000289895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/895/GCA_000289895.1_ASM28989v1	-	BSU247
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.12216	41.1	-	CEHY01	138	2140	2010	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233967	GCA_000938495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/495/GCA_000938495.1_Velvet_assembly	-	LSL
Pseudomonas syringae	317	PRJNA387592	387592	Proteobacteria	Gammaproteobacteria	5.93964	59.5	-	NHSV01	122	5347	5115	9/20/17	9/22/17	Contig	Max Planck Institute 	SAMN07158958	GCA_002318015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/015/GCA_002318015.1_ASM231801v1	28880925	LP221b
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.65934	38.3	-	FJLH01	64	3350	3200	2/20/16	3/27/17	Contig	SC	SAMEA2078024	GCA_900049305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/305/GCA_900049305.1_10625_3_52	-	2532STDY5467621
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.66853	50.7	-	FTVB01	384	5221	4502	1/28/17	3/2/17	Contig	SC	SAMEA2054570	GCA_900158285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/285/GCA_900158285.1_9803_4_25	-	2090STDY5461843
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.23289	67.1	-	MUSR01	192	7827	7306	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001883	GCA_001993335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/335/GCA_001993335.1_ASM199333v1	-	VC15221
Burkholderia pseudomallei MSHR449	1435986	PRJNA231481	231481	Proteobacteria	Betaproteobacteria	7.3113	68	-	JQFO01	4	7629	6914	11/11/14	4/10/17	Scaffold	Los Alamos National Laboratory	SAMN02999500	GCA_000774895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/895/GCA_000774895.1_BPE	25676747	MSHR449
Bacillus thuringiensis serovar rongseni	180865	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.77639	34.9	-	NFDK01	46	6129	5750	5/17/17	5/24/17	Scaffold	Huazhong Agricultural University	SAMN05934528	GCA_002146815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/815/GCA_002146815.1_ASM214681v1	-	BGSC 4BT1
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.08036	47.4	-	JSTL01	114	3900	3742	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104872	GCA_000788875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/875/GCA_000788875.1_ASM78887v1	25538191	2012HC-07
Clostridioides difficile DA00216	1151349	PRJNA85873	85873	Terrabacteria group	Firmicutes	4.05881	28.7	-	AVJX01	475	3782	3628	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766668	GCA_000450505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/505/GCA_000450505.2_ASM45050v2	-	DA00216
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.87853	32.3	-	MRJO01	96	2013	1560	4/19/17	4/22/17	Scaffold	FOI Swedish Defence Research Agency	SAMN03774111	GCA_002100275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/275/GCA_002100275.1_ASM210027v1	28348839	FSC456
Brucella abortus 90-0775	1328351	PRJNA200934	200934	Proteobacteria	Alphaproteobacteria	3.2856	57.2	-	ATGU01	4	3388	3166	6/21/13	3/24/17	Contig	Broad Institute	SAMN02092514	GCA_000413675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/675/GCA_000413675.1_Bruc_abor_biovar_4_90-0775_V1	-	90-0775
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.93063	37.9	-	MLNK01	403	2045	1716	11/7/16	4/10/17	Contig	Australian Wine Research Institute	SAMN04297076	GCA_001869375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/375/GCA_001869375.1_ASM186937v1	27118061	AWRIB445
Vibrio parahaemolyticus S121	1394656	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.05426	45.2	-	AWJE01	722	4816	4602	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338970	GCA_000490015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/015/GCA_000490015.1_S121	-	S121
Campylobacter coli	195	PRJNA319256	319256	Proteobacteria	delta/epsilon subdivisions	1.66852	31.5	chromosome:NZ_CP015528.1/CP015528.1	-	1	1707	1570	5/6/16	3/20/17	Complete Genome	USDA	SAMN04883459	GCA_001639125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/125/GCA_001639125.1_ASM163912v1	-	YH501
Klebsiella pneumoniae subsp. pneumoniae KpQ3	1226115	PRJNA172823	172823	Proteobacteria	Gammaproteobacteria	5.46667	57.3	-	AMSU01	18	5444	5221	10/2/12	2/21/17	Scaffold	"ohnosequences! research group, Era7 Bioinformatics"	SAMN02469893	GCA_000300835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/835/GCA_000300835.1_K1_1	23469341	KpQ3
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	4.05543	28	-	LFPZ01	61	3891	3679	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779973	GCA_001574195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/195/GCA_001574195.1_ASM157419v1	26939550	SU1074
Enterococcus faecalis EnGen0366	1169281	PRJNA157731	157731	Terrabacteria group	Firmicutes	3.27428	37.4	-	ASCV01	8	3463	3265	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847597	GCA_000392775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/775/GCA_000392775.1_Ente_faec_599951_V1	-	599951
Streptococcus mutans B07Sm2	1225192	PRJNA173252	173252	Terrabacteria group	Firmicutes	2.22226	36.8	-	ALYT01	49	2223	2088	1/24/14	3/24/17	Contig	New York University College of Dentistry	SAMN02641539	GCA_000522665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/665/GCA_000522665.1_out_k39_n4_samp06-contigs.fa	24291226	B07Sm2
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.15265	52.4	-	CQKX01	78	2521	2210	3/23/15	4/11/17	Contig	SC	SAMEA1690416	GCA_001140465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/465/GCA_001140465.1_8727_8_5	-	GCGS101
Enterococcus faecium EnGen0130	1157425	PRJNA88277	88277	Terrabacteria group	Firmicutes	2.67255	38.1	-	AISU01	12	2721	2487	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808953	GCA_000391925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/925/GCA_000391925.1_Ente_faec_841V03_V1	-	841V03
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.14644	41.2	-	CWBF01	76	2090	1907	6/24/15	3/26/17	Contig	SC	SAMEA1032940	GCA_001177985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/985/GCA_001177985.1_6903_4_61	-	EQUI0110
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.48344	66.1	-	DBMY01	186	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06457071	GCA_002298285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/285/GCA_002298285.1_ASM229828v1	28894102	-
Brucella melitensis	29459	PRJNA288259	288259	Proteobacteria	Alphaproteobacteria	3.28145	57.2	-	LKAT01	80	3161	2791	9/29/15	9/29/15	Contig	Stavropol Plague Control Reseach Institute	SAMN03797527	GCA_001302485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/485/GCA_001302485.1_ASM130248v1	-	C-567
Tenacibaculum dicentrarchi	669041	PRJNA305919	305919	FCB group	Bacteroidetes/Chlorobi group	2.91825	31.5	chromosome:NZ_CP013671.1/CP013671.1	-	1	2555	2425	12/30/15	4/16/17	Complete Genome	ADL Diagnostic Chile Ltda	SAMN04346845	GCA_001483385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/483/385/GCA_001483385.1_ASM148338v1	26893432	AY7486TD
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.45101	53.5	-	LSXL01	48	2360	2196	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496992	GCA_002203695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/695/GCA_002203695.1_S98	-	4031
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.64915	46.7	-	CTJH01	129	4406	4146	3/26/15	3/26/17	Scaffold	SC	SAMEA980148	GCA_001222985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/985/GCA_001222985.1_4976_2_5	-	YE231/02
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.29727	59.9	-	FCMN01	28	5063	4894	1/21/16	3/27/17	Scaffold	SC	SAMEA2274016	GCA_001537165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/165/GCA_001537165.1_12082_5_44	-	2880STDY5682944
Lactobacillus plantarum	1590	PRJNA283610	283610	Terrabacteria group	Firmicutes	3.30206	44.4	-	LEAV01	67	3195	3053	12/3/16	3/28/17	Contig	"Faculty of Agro-industry, Prince of Songkla University, wageningen university"	SAMN03654439	GCA_001888735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/735/GCA_001888735.1_ASM188873v1	-	299v
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.73329	31.4	-	LBEB01	66	1796	1694	10/27/15	3/18/17	Contig	FDA	SAMN03344563	GCA_001417305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/305/GCA_001417305.1_ASM141730v1	-	CVM N51712
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.48095	32.8	-	CUDP01	86	2440	2323	3/31/15	4/21/17	Scaffold	SC	SAMEA1035147	GCA_001238205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/205/GCA_001238205.1_7067_4_55	-	51-31
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.96071	55.1	-	JYMQ01	100	4935	4658	3/13/15	3/25/17	Scaffold	University of Minnesota	SAMN03333167	GCA_000952755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/755/GCA_000952755.1_ASM95275v1	26438492	MNCRE38
Cronobacter sakazakii	28141	PRJNA247778	247778	Proteobacteria	Gammaproteobacteria	4.57278	55	-	JNBK01	724	-	-	1/25/17	1/25/17	Scaffold	"Nottingham Trent University, UK"	SAMN02780913	GCA_001971185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/185/GCA_001971185.1_ASM197118v1	-	557
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.92058	64.2	-	FVAP01	12	4909	4762	3/10/17	3/18/17	Contig	SC	SAMEA2070434	GCA_900130765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/765/GCA_900130765.1_10665_3_27	-	197
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.18147	63.7	-	DGLX01	94	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451050	GCA_002388145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/145/GCA_002388145.1_ASM238814v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.49575	67.3	-	LPDG01	130	6788	6446	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449425	GCA_001530245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/245/GCA_001530245.1_ASM153024v1	-	MSMB1069WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.11869	55	-	LPQQ01	93	5044	4813	12/21/15	3/27/17	Contig	JCVI	SAMN04252891	GCA_001471975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/975/GCA_001471975.1_SMART_268.v1	-	SMART_268
Pseudomonas sp. Ant30-3	1488328	PRJNA244685	244685	Proteobacteria	Gammaproteobacteria	6.14016	58.6	-	JMCL01	266	5726	5356	5/14/14	4/9/17	Contig	University of Alabama at Birmingham	SAMN02727995	GCA_000690905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/905/GCA_000690905.1_Pseudomonas_sp._Ant30-3	24903870	Ant30-3
Streptomyces sp. NRRL WC-3540	1463924	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.0313	72.6	-	JOCW01	104	7065	6759	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645429	GCA_000718915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/915/GCA_000718915.1_ASM71891v1	-	NRRL WC-3540
Bacillus sp. ISSFR-25F	1973489	PRJNA335430	335430	Terrabacteria group	Firmicutes	5.92069	37	-	NBNQ01	2941	-	-	5/19/17	5/19/17	Contig	NBACC	SAMN05442527	GCA_002151595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/595/GCA_002151595.1_ASM215159v1	-	ISSFR-25F
Acinetobacter sp. ANC 3832	1977874	PRJNA380882	380882	Proteobacteria	Gammaproteobacteria	3.81396	37	-	NEGJ01	35	3635	3424	5/15/17	5/23/17	Contig	National Institute of Public Health	SAMN06641962	GCA_002135415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/415/GCA_002135415.1_ASM213541v1	-	ANC 3832
Clostridium sp. CAG:277	1262790	PRJEB808	206790	Terrabacteria group	Firmicutes	3.01538	43.9	-	CBJK01	67	2714	2689	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138789	GCA_000438095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/095/GCA_000438095.1_MGS277	-	-
Staphylococcus sp. HMSC34B12	1608857	PRJNA274509	274509	Terrabacteria group	Firmicutes	2.37924	32.6	-	LTNA01	54	2357	2216	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498862	GCA_001838685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/685/GCA_001838685.1_ASM183868v1	-	HMSC34B12
Streptococcus sp. UBA632	1947566	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.44472	40.9	-	DBPA01	63	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455720	GCA_002300045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/045/GCA_002300045.1_ASM230004v1	28894102	-
Mycobacterium sp. SCH	1885026	PRJNA335867	335867	Terrabacteria group	Actinobacteria	6.14563	70	-	MCHX01	184	5926	5611	10/17/16	4/13/17	Contig	UW	SAMN05465167	GCA_001766635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/635/GCA_001766635.1_ASM176663v1	-	SCH
Mycobacterium sp. 24999	1908206	PRJNA347845	347845	Terrabacteria group	Actinobacteria	6.43437	66.2	-	MLHV01	300	6168	5907	10/26/16	4/13/17	Contig	University of Georgia	SAMN05897977	GCA_001853525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/525/GCA_001853525.1_ASM185352v1	-	24999
Staphylococcus sp. HMSC34C02	1608858	PRJNA274510	274510	Terrabacteria group	Firmicutes	2.51561	33.7	-	LTMZ01	47	2421	2325	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498856	GCA_001838705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/705/GCA_001838705.1_ASM183870v1	-	HMSC34C02
Clostridium sp. CAG:389	1262801	PRJEB862	206747	Terrabacteria group	Firmicutes	1.46526	26.9	-	CBJV01	104	1434	1409	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138797	GCA_000438255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/255/GCA_000438255.1_MGS389	-	-
Acinetobacter sp. ANC 4654	1977872	PRJNA380882	380882	Proteobacteria	Gammaproteobacteria	3.4518	39.3	-	NEGL01	24	3350	3170	5/15/17	5/23/17	Contig	National Institute of Public Health	SAMN06641960	GCA_002135425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/425/GCA_002135425.1_ASM213542v1	-	ANC 4654
Bacillus sp. EAC	1978338	PRJNA381922	381922	Terrabacteria group	Firmicutes	4.33068	33.1	-	NCSY01	28	4174	4030	5/23/17	6/16/17	Contig	Lycoming College	SAMN06692353	GCA_002156875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/875/GCA_002156875.1_ASM215687v1	-	EAC
Streptomyces sp. NRRL S-237	1463895	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.82569	71.7	-	JODA01	173	8120	7697	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645433	GCA_000718935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/935/GCA_000718935.1_ASM71893v1	-	NRRL S-237
Pseudomonas sp. P482	1460691	PRJNA239153	239153	Proteobacteria	Gammaproteobacteria	5.624	62.4	-	JHTS01	69	5235	5083	5/29/14	4/9/17	Contig	Intercollegiate Faculty of Biotechnology UG&MUG	SAMN02615698	GCA_000696345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/345/GCA_000696345.1_ASM69634v1	24970823	P482
Enterobacter hormaechei	158836	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.04584	54.5	-	LPQO01	63	4955	4701	12/21/15	3/27/17	Contig	JCVI	SAMN04252893	GCA_001472005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/005/GCA_001472005.1_SMART_271.v1	-	SMART_271
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.385	67.3	-	LPDM01	116	6744	6400	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449431	GCA_001530255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/255/GCA_001530255.1_ASM153025v1	-	MSMB1082WGS
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.62648	63.7	-	DGMB01	15	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456089	GCA_002388215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/215/GCA_002388215.1_ASM238821v1	28894102	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.87658	64.1	-	FVAH01	20	4909	4788	3/10/17	3/18/17	Contig	SC	SAMEA1970807	GCA_900130775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/775/GCA_900130775.1_10665_3_28	-	198
Cronobacter sakazakii	28141	PRJNA248262	248262	Proteobacteria	Gammaproteobacteria	4.60549	55.9	-	JNCZ01	128	-	-	1/25/17	8/9/17	Scaffold	"Nottingham Trent University, UK"	SAMN02796095	GCA_001971245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/245/GCA_001971245.1_ASM197124v1	-	978
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.96742	55.1	-	JZDG01	112	4943	4669	3/20/15	3/25/17	Scaffold	University of Minnesota	SAMN03333168	GCA_000958665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/665/GCA_000958665.1_ASM95866v1	26438492	MNCRE39
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.72407	32.5	-	CUDT01	157	2705	2568	3/31/15	3/26/17	Scaffold	SC	SAMEA1035118	GCA_001238425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/425/GCA_001238425.1_7067_4_59	-	51-35
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.73651	31.4	-	LBEA01	133	1802	1677	10/27/15	3/18/17	Contig	FDA	SAMN03344564	GCA_001417325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/325/GCA_001417325.1_ASM141732v1	-	CVM N51987
Lactobacillus plantarum	1590	PRJNA283610	283610	Terrabacteria group	Firmicutes	3.21124	44.5	-	LEBW01	22	3121	2978	12/3/16	3/28/17	Contig	"Faculty of Agro-industry, Prince of Songkla University, wageningen university"	SAMN03654463	GCA_001888745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/745/GCA_001888745.1_ASM188874v1	-	K36
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.12534	60	-	FCJG01	15	4882	4714	1/21/16	3/27/17	Scaffold	SC	SAMEA2273996	GCA_001537185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/185/GCA_001537185.1_12082_3_26	-	2880STDY5682924
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.58923	47.1	-	CTRG01	37	4274	4081	3/26/15	3/26/17	Scaffold	SC	SAMEA980153	GCA_001223065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/065/GCA_001223065.1_4976_2_7	-	YE228/02
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.4047	53.6	-	LSXM01	49	2330	2115	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496997	GCA_002203705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/705/GCA_002203705.1_S99	-	4502
Mycoplasma gallisepticum S6	1006581	PRJNA65551	65551	Terrabacteria group	Tenericutes	0.985433	31.5	chromosome:NC_023030.2/CP006916.3	-	1	814	701	12/11/13	4/21/17	Complete Genome	Research Institute of Phisical-Chemical Medicine (Moscow)	SAMN02641558	GCA_000211545.6	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/211/545/GCA_000211545.6_ASM21154v6	21818284	S6
Brucella melitensis	29459	PRJNA289961	289961	Proteobacteria	Alphaproteobacteria	3.2799	57.2	-	LKAU01	63	3146	2637	9/29/15	9/29/15	Contig	Stavropol Plague Control Reseach Institute	SAMN03860172	GCA_001302525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/525/GCA_001302525.1_ASM130252v1	-	C-568
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.88557	65.6	-	DBUE01	452	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06453096	GCA_002307825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/825/GCA_002307825.1_ASM230782v1	28894102	-
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12932	41.2	-	CWAW01	78	2055	1887	6/23/15	3/26/17	Contig	SC	SAMEA1032941	GCA_001178005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/005/GCA_001178005.1_6903_4_50	-	EQUI0099
Enterococcus faecium EnGen0128	1157429	PRJNA88285	88285	Terrabacteria group	Firmicutes	2.59213	38.1	-	AISY01	9	2644	2429	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808958	GCA_000391945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/945/GCA_000391945.1_Ente_faec_9730219-1_V1	-	9730219-1
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.1483	52.4	-	CQII01	75	2527	2210	3/23/15	4/11/17	Contig	SC	SAMEA1690504	GCA_001140845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/845/GCA_001140845.1_8289_2_26	-	GCGS026
Streptococcus mutans B09Sm1	1225193	PRJNA173254	173254	Terrabacteria group	Firmicutes	2.15448	37	-	ALYU01	106	2161	2002	1/24/14	3/24/17	Contig	New York University College of Dentistry	SAMN02641540	GCA_000522685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/685/GCA_000522685.1_out_k25_n4_samp07-contigs.fa	24291226	B09Sm1
Enterococcus faecalis EnGen0344	1169282	PRJNA157733	157733	Terrabacteria group	Firmicutes	3.00786	37.3	-	ASCW01	4	3037	2888	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847598	GCA_000392795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/795/GCA_000392795.1_Ente_faec_12030_V1	-	12030
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.92916	28	-	LFQA01	46	3732	3540	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779974	GCA_001574205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/205/GCA_001574205.1_ASM157420v1	26939550	SU1112
Klebsiella pneumoniae subsp. pneumoniae WGLW3	1203546	PRJNA169455	169455	Proteobacteria	Gammaproteobacteria	5.54808	57.2	-	AMLN01	6	5531	5293	9/18/12	2/21/17	Scaffold	Broad Institute	SAMN02463958	GCA_000300935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/935/GCA_000300935.1_Kleb_pneu_WGLW3_V1	-	WGLW3
Bacillus subtilis subsp. subtilis	135461	PRJNA335940	335940	Terrabacteria group	Firmicutes	2.90231	44.3	chromosome:CP016787.1	-	1	3035	2902	8/3/16	8/3/16	Chromosome	University of Goettingen	SAMN05467329	GCA_001698485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/485/GCA_001698485.1_ASM169848v1	-	IIG-Bs27-47-24
Vibrio parahaemolyticus S120	1394655	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.14683	45.3	-	AWJF01	782	4925	4710	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338969	GCA_000490035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/035/GCA_000490035.1_S120	-	S120
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.89156	38	-	MLNP01	175	1963	1741	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297081	GCA_001869395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/395/GCA_001869395.1_ASM186939v1	27118061	AWRIB460
Brucella abortus 90-0737	1328352	PRJNA200935	200935	Proteobacteria	Alphaproteobacteria	3.28641	57.2	-	ATGT01	4	3381	3158	6/21/13	3/24/17	Contig	Broad Institute	SAMN02092515	GCA_000413695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/695/GCA_000413695.1_Bruc_abor_biovar_2_90-0737_V1	-	90-0737
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.83811	32.4	-	MRLB01	230	1964	1505	4/19/17	4/22/17	Scaffold	FOI Swedish Defence Research Agency	SAMN03773837	GCA_002100325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/325/GCA_002100325.1_ASM210032v1	28348839	FDC095
Clostridioides difficile DA00232	1151350	PRJNA85875	85875	Terrabacteria group	Firmicutes	3.99453	28.3	-	AVJY01	123	3731	3540	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766669	GCA_000450525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/525/GCA_000450525.2_ASM45052v2	-	DA00232
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.02411	47.5	-	JSTT01	114	3820	3657	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104874	GCA_000788895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/895/GCA_000788895.1_ASM78889v1	25538191	2012HC-18
Bacillus thuringiensis serovar alesti	1440	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.94716	35.2	-	NFDM01	147	6329	5911	5/17/17	5/24/17	Scaffold	Huazhong Agricultural University	SAMN05934535	GCA_002146845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/845/GCA_002146845.1_ASM214684v1	-	BGSC 4C1
Burkholderia pseudomallei	28450	PRJNA231189	231189	Proteobacteria	Betaproteobacteria	7.33585	68	-	JQIL01	3	7565	6992	11/11/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN03004390	GCA_000774945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/945/GCA_000774945.1_BCW_7	25676747	MSHR4009
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.08728	67	-	MUSS01	123	7726	7320	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001884	GCA_001993355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/355/GCA_001993355.1_ASM199335v1	-	VC6072
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.58365	50.8	-	FTVI01	351	5080	4385	1/28/17	2/26/17	Contig	SC	SAMEA2054578	GCA_900158345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/345/GCA_900158345.1_9803_4_33	-	2090STDY5461851
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.53895	38.3	-	FJJA01	60	3233	3086	2/20/16	3/27/17	Contig	SC	SAMEA2080683	GCA_900049375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/375/GCA_900049375.1_10625_2_77	-	2532STDY5467550
Pseudomonas syringae	317	PRJNA387592	387592	Proteobacteria	Gammaproteobacteria	7.08111	59.3	-	NHST01	70	6428	5954	9/20/17	9/22/17	Contig	Max Planck Institute 	SAMN07158960	GCA_002318025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/025/GCA_002318025.1_ASM231802v1	28880925	RM.P66
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	1.99757	41.4	-	CEHK01	130	1983	1839	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233950	GCA_000938555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/555/GCA_000938555.1_Velvet_assembly	-	LS8J
Streptococcus agalactiae FSL S3-003	1154806	PRJNA86203	86203	Terrabacteria group	Firmicutes	2.11372	35.3	-	ALQJ01	32	2179	2062	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991073	GCA_000289915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/915/GCA_000289915.1_ASM28991v1	-	FSL S3-003
Acinetobacter baumannii	470	PRJNA279992	279992	Proteobacteria	Gammaproteobacteria	3.99848	39	-	LAVJ01	152	3890	3729	4/28/15	3/17/17	Scaffold	University of aberdeen	SAMN03453211	GCA_000981405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/405/GCA_000981405.1_ASM98140v1	-	Ab1
Pseudomonas aeruginosa BL14	1402555	PRJNA219917	219917	Proteobacteria	Gammaproteobacteria	7.11451	65.8	-	AXPM01	8	6704	6480	10/24/13	3/9/17	Scaffold	Broad Institute	SAMN02360727	GCA_000480865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/865/GCA_000480865.1_Pseu_aeru_BL14_V1	-	BL14
Shigella flexneri 2001048	1434182	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.44691	50.4	-	AZQI01	312	4950	4205	1/29/14	2/23/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437417	GCA_000566585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/585/GCA_000566585.1_ASM56658v1	-	2001048
Bacillus anthracis	1392	PRJNA357857	357857	Terrabacteria group	Firmicutes	5.38997	35.3094	chromosome:CP019726.1; plasmid pXO1:CP019727.1	-	2	-	-	2/21/17	2/21/17	Chromosome	NHGRI/NIH	SAMN06161234	GCA_002005265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/265/GCA_002005265.1_ASM200526v1	-	Sterne 34F2
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.79231	34.9	-	JQQF01	338	4368	3919	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949513	GCA_001568135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/135/GCA_001568135.1_ASM156813v1	26833181	56126
Streptococcus pyogenes ABC020039031	1439111	PRJNA233013	233013	Terrabacteria group	Firmicutes	1.81669	38.4	-	JJIN01	7	1848	1735	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567362	GCA_000631445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/445/GCA_000631445.1_Stre_pyog_ABC020039031_V1	-	ABC020039031
Neisseria meningitidis M7124	1095685	PRJNA76301	76301	Proteobacteria	Betaproteobacteria	2.19069	51.7	-	ANRO01	24	2557	2168	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055166	GCA_000327625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/625/GCA_000327625.2_ASM32762v2	-	M7124
Helicobacter pylori GAM83Bi	1159055	PRJNA89281	89281	Proteobacteria	delta/epsilon subdivisions	1.60676	39.4	-	APEE01	49	1584	1448	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436699	GCA_000345625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/625/GCA_000345625.2_ASM34562v2	-	GAM83Bi
Streptococcus pneumoniae EU-NP01	760877	PRJNA48947	48947	Terrabacteria group	Firmicutes	2.22443	39.7	-	AGQH01	20	2477	2139	10/25/11	3/9/17	Contig	Institute for Genome Sciences	SAMN00792705	GCA_000233245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/245/GCA_000233245.2_ASM23324v2	-	EU-NP01
Flavobacterium columnare ATCC 49512	1041826	PRJNA67781	67781	FCB group	Bacteroidetes/Chlorobi group	3.16243	31.5	chromosome:NC_016510.2/CP003222.2	-	1	2787	2636	12/23/11	3/30/17	Complete Genome	Mississippi State University	SAMN02603612	GCA_000240075.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/075/GCA_000240075.2_ASM24007v2	22535941	ATCC 49512
Mycobacterium tuberculosis PanR0602	1352574	PRJNA210051	210051	Terrabacteria group	Actinobacteria	4.40645	65.4996	chromosome:NZ_CM002122.1/CM002122.1	ATRT01	1	4294	4081	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471059	GCA_000445325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/325/GCA_000445325.1_fedora0602_IS	23884993	PanR0602
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.71408	68.7	-	LNBM01	233	5535	5049	4/4/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04226728	GCA_001610005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/005/GCA_001610005.1_ASM161000v1	-	MAH-P-589-08
Bacillus cereus VD131	1053232	PRJNA70431	70431	Terrabacteria group	Firmicutes	6.11847	35	-	AHFA01	14	6428	5920	5/16/13	3/24/17	Scaffold	Broad Institute	SAMN02596864	GCA_000399385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/385/GCA_000399385.1_Baci_cere_VD131_V1	-	VD131
Staphylococcus epidermidis	1282	PRJNA263224	263224	Terrabacteria group	Firmicutes	2.48408	31.9	-	JRVQ01	124	2470	2302	12/11/15	3/27/17	Contig	CSIR-Institute of Microbial Technology	SAMN03097233	GCA_001465395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/465/395/GCA_001465395.1_ASM146539v1	26758912	SE4.8
Listeria monocytogenes Lm_1889	1425340	PRJNA229093	229093	Terrabacteria group	Firmicutes	3.02993	37.9	-	AZIY01	28	3064	2987	3/6/14	2/26/17	Scaffold	University of Milan	SAMN02412416	GCA_000585835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/835/GCA_000585835.1_Lm1889	24723720	Lm_1889
Yersinia pestis PY-102	992183	PRJNA64393	64393	Proteobacteria	Gammaproteobacteria	4.67235	47.5	-	AKTQ01	537	4581	4216	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141504	GCA_000269225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/225/GCA_000269225.1_ASM26922v1	-	PY-102
Campylobacter jejuni	197	PRJNA295062	295062	Proteobacteria	delta/epsilon subdivisions	1.65418	30.4	-	LLWN01	30	1750	1642	10/29/15	3/18/17	Scaffold	Monash University	SAMN04159299	GCA_001420455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/455/GCA_001420455.1_ASM142045v1	27151799	2871
Mycoplasma gallisepticum str. R(high)	710128	PRJNA43299	43299	Terrabacteria group	Tenericutes	1.01203	31.5	chromosome:NC_017502.1/CP001872.1	-	1	822	729	1/29/10	3/29/17	Complete Genome	University of Connecticut	SAMN02604154	GCA_000025365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/365/GCA_000025365.1_ASM2536v1	20123709	R(high)
Mycoplasma gallisepticum str. R(low)	710127	PRJNA409	409	Terrabacteria group	Tenericutes	1.0128	31.5	chromosome:NC_004829.2/AE015450.2	-	1	823	733	6/9/03	3/29/17	Complete Genome	Univ. Connecticut	SAMN02604081	GCA_000092585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/585/GCA_000092585.1_ASM9258v1	12949158	R
Campylobacter coli	195	PRJNA276885	276885	Proteobacteria	delta/epsilon subdivisions	1.73255	31.4122	chromosome:NZ_CP011015.1/CP011015.1; plasmid pCC42:NZ_CP011016.1/CP011016.1; plasmid pFB1TET:NZ_CP011017.1/CP011017.1	-	3	1787	1687	3/17/15	3/17/17	Complete Genome	University of Nottingham	SAMN03381357	GCA_000954195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/954/195/GCA_000954195.1_ASM95419v1	-	FB1
Campylobacter coli CVM N29710	1273173	PRJNA184035	184035	Proteobacteria	delta/epsilon subdivisions	1.73205	31.4057	chromosome:NC_022347.1/CP004066.1; plasmid pN29710-1:NC_022355.1/CP004067.1; plasmid pN29710-2:NC_022348.1/CP004068.1	-	3	1786	1655	9/9/13	3/15/17	Complete Genome	FDA/CVM	SAMN02603234	GCA_000465235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/235/GCA_000465235.1_ASM46523v1	23959310	CVM N29710
Campylobacter jejuni	197	PRJNA295062	295062	Proteobacteria	delta/epsilon subdivisions	1.741	30.3	-	LLWM01	109	1866	1682	10/29/15	3/18/17	Scaffold	Monash University	SAMN04159286	GCA_001420485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/485/GCA_001420485.1_ASM142048v1	27151799	2868
Yersinia pestis PY-113	992185	PRJNA64397	64397	Proteobacteria	Gammaproteobacteria	4.61589	47.6	-	AKTS01	600	4494	4157	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141506	GCA_000269245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/245/GCA_000269245.1_ASM26924v1	-	PY-113
Listeria monocytogenes Lm_1880	1425335	PRJNA229093	229093	Terrabacteria group	Firmicutes	3.05234	37.8	-	AZIZ01	24	3097	3027	3/6/14	2/26/17	Scaffold	University of Milan	SAMN02412345	GCA_000585855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/855/GCA_000585855.1_Lm1880	24723720	Lm_1880
Staphylococcus epidermidis	1282	PRJNA304253	304253	Terrabacteria group	Firmicutes	2.42181	31.9	-	LNUN01	72	2385	2274	12/18/15	3/27/17	Contig	Aarhus University	SAMN04296969	GCA_001469325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/325/GCA_001469325.1_ASM146932v1	26924200	AU21
Bacillus cereus HuA2-3	1053202	PRJNA70369	70369	Terrabacteria group	Firmicutes	5.71703	35.2	-	AHDW01	11	6051	5659	5/16/13	3/24/17	Scaffold	Broad Institute	SAMN02596834	GCA_000399405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/405/GCA_000399405.1_Baci_cere_HuA2-3_V1	-	HuA2-3
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.21457	69.2	-	LNBO01	171	5028	4661	4/4/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04226732	GCA_001610035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/035/GCA_001610035.1_ASM161003v1	-	MAH-P-772-08
Mycobacterium tuberculosis PanR0603	1352575	PRJNA210052	210052	Terrabacteria group	Actinobacteria	4.40806	65.2486	chromosome:NZ_CM002121.1/CM002121.1	ATRU01	1	4316	4048	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471094	GCA_000445345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/345/GCA_000445345.1_fedora0603_IS	23884993	PanR0603
Candidatus Nitrosomarinus catalina	1898749	PRJNA341864	341864	TACK group	Thaumarchaeota	1.36008	31.4	chromosome:NZ_CP021324.1/CP021324.1	-	1	1649	1591	5/22/17	5/26/17	Complete Genome	University of Southern California	SAMN05730076	GCA_002156965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/965/GCA_002156965.1_ASM215696v1	28418097	SPOT01
Streptococcus pneumoniae GA07228	760754	PRJNA48665	48665	Terrabacteria group	Firmicutes	2.03579	40	-	AGQI01	8	2274	1994	10/25/11	3/9/17	Contig	Institute for Genome Sciences	SAMN00792724	GCA_000233265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/265/GCA_000233265.2_ASM23326v2	-	GA07228
Helicobacter pylori GAM83T	1159056	PRJNA89283	89283	Proteobacteria	delta/epsilon subdivisions	1.60844	39.4	-	APEF01	44	1586	1456	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436700	GCA_000345645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/645/GCA_000345645.2_ASM34564v2	-	GAM83T
Neisseria meningitidis 97014	1095691	PRJNA76313	76313	Proteobacteria	Betaproteobacteria	2.21577	51.8	-	ANRI01	25	2618	2217	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055175	GCA_000327645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/645/GCA_000327645.2_ASM32764v2	-	97014
Streptococcus pyogenes ABC020037542	1439095	PRJNA233010	233010	Terrabacteria group	Firmicutes	1.82773	38.4	-	JJIO01	7	1867	1761	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567359	GCA_000631465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/465/GCA_000631465.1_Stre_pyog_ABC020037542_V1	-	ABC020037542
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.62634	34.9	-	JQQG01	252	4137	3755	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949514	GCA_001568155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/155/GCA_001568155.1_ASM156815v1	26833181	56129
Bacillus anthracis str. A2012	191218	PRJNA299	299	Terrabacteria group	Firmicutes	5.37006	35.1647	chromosome:AAAC01000001.1; plasmid pXO1:AE011190.1; plasmid pXO2:AE011191.1	AAAC01	3	334	297	5/9/02	12/5/13	Chromosome	J. Craig Venter Institute	SAMN02435829	GCA_000006155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/006/155/GCA_000006155.2_ASM615v2	12004073	A2012
Shigella flexneri 2002035	1434183	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.47303	50.5	-	AZQJ01	300	4985	4236	1/29/14	2/23/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437418	GCA_000566605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/605/GCA_000566605.1_ASM56660v1	-	2002035
Pseudomonas aeruginosa BL13	1402554	PRJNA219916	219916	Proteobacteria	Gammaproteobacteria	7.28827	65.7	-	AXPN01	4	6889	6670	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360726	GCA_000480885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/885/GCA_000480885.1_Pseu_aeru_BL13_V1	-	BL13
Acinetobacter baumannii	470	PRJNA295432	295432	Proteobacteria	Gammaproteobacteria	3.84519	39.1	-	LKAH01	63	3696	3534	10/29/15	3/18/17	Scaffold	University of aberdeen	SAMN04054373	GCA_001420505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/505/GCA_001420505.1_ASM142050v1	-	A186
Streptococcus agalactiae BSU188	1154828	PRJNA86311	86311	Terrabacteria group	Firmicutes	2.15932	35.2	-	ALRF01	131	2289	2111	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991127	GCA_000289935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/935/GCA_000289935.1_ASM28993v1	-	BSU188
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	1.98734	41.3	-	CEKT01	65	1989	1896	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234021	GCA_000938675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/675/GCA_000938675.1_Velvet_assembly	-	S15Y
Pseudomonas syringae	317	PRJNA387592	387592	Proteobacteria	Gammaproteobacteria	6.22989	59.1	-	NHSR01	159	5651	5411	9/20/17	9/22/17	Contig	Max Planck Institute 	SAMN07158962	GCA_002318655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/655/GCA_002318655.1_ASM231865v1	28880925	RM.P20
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.60606	38.2	-	FJBF01	38	3335	3173	2/20/16	3/27/17	Contig	SC	SAMEA2059859	GCA_900050175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/175/GCA_900050175.1_10771_1_21	-	2531STDY5467302
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.56022	50.7	-	FTVK01	344	5056	4355	1/28/17	2/26/17	Contig	SC	SAMEA2054580	GCA_900158375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/375/GCA_900158375.1_9803_4_35	-	2090STDY5461853
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.018	67	-	MUSV01	144	7667	7241	2/10/17	4/2/17	Contig	University of British Columbia	SAMN05001888	GCA_001993375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/375/GCA_001993375.1_ASM199337v1	-	VC7949
Burkholderia pseudomallei	28450	PRJNA231191	231191	Proteobacteria	Betaproteobacteria	7.34179	68	-	JQIK01	3	7579	7011	11/11/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN03004396	GCA_000774955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/955/GCA_000774955.1_BCW_9	25676747	MSHR4018
Bacillus thuringiensis serovar yosoo	180848	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.21848	34.7	-	NFDN01	77	6582	6191	5/17/17	6/15/17	Scaffold	Huazhong Agricultural University	SAMN05934536	GCA_002146865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/865/GCA_002146865.1_ASM214686v1	-	BGSC 4CA1
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.012	47.5	-	JSTS01	102	3829	3668	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104863	GCA_000788915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/915/GCA_000788915.1_ASM78891v1	25538191	2012HC-17
Clostridioides difficile DA00238	1151351	PRJNA85877	85877	Terrabacteria group	Firmicutes	4.16392	28.4	-	AVJZ01	94	3900	3700	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766670	GCA_000450545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/545/GCA_000450545.2_ASM45054v2	-	DA00238
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.85482	32.2	-	MRLH01	155	2000	1557	4/19/17	4/22/17	Scaffold	FOI Swedish Defence Research Agency	SAMN03773728	GCA_002100365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/365/GCA_002100365.1_ASM210036v1	28348839	F0732
Brucella abortus 90-1280	1328353	PRJNA200937	200937	Proteobacteria	Alphaproteobacteria	3.2855	57.2	-	ATGS01	4	3383	3160	6/21/13	3/24/17	Contig	Broad Institute	SAMN02092516	GCA_000413715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/715/GCA_000413715.1_Bruc_abor_biovar_2_90-1280_V1	-	90-1280
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.93824	38.1	-	MLNQ01	255	1991	1761	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297082	GCA_001869405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/405/GCA_001869405.1_ASM186940v1	27118061	AWRIB461
Vibrio parahaemolyticus S119	1394654	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.19793	45.1	-	AWJG01	718	4943	4717	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338968	GCA_000490055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/055/GCA_000490055.1_S119	-	S119
Bacillus subtilis subsp. subtilis	135461	PRJNA335940	335940	Terrabacteria group	Firmicutes	2.7593	44.2	chromosome:CP016788.1	-	1	2890	2756	8/3/16	8/3/16	Chromosome	University of Goettingen	SAMN05467340	GCA_001698505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/505/GCA_001698505.1_ASM169850v1	-	PG10
Klebsiella pneumoniae subsp. pneumoniae WGLW5	1203547	PRJNA169456	169456	Proteobacteria	Gammaproteobacteria	5.82182	56.7	-	AMLO01	10	5829	5568	9/18/12	2/21/17	Scaffold	Broad Institute	SAMN02463959	GCA_000300955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/955/GCA_000300955.1_Kleb_pneu_WGLW5_V1	-	WGLW5
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	4.53497	28.1	-	LFRB01	272	4504	4199	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779984	GCA_001574225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/225/GCA_001574225.1_ASM157422v1	26939550	SU0945
Enterococcus faecalis EnGen0361	1169283	PRJNA157735	157735	Terrabacteria group	Firmicutes	3.16517	37.4	-	ASCX01	17	3294	3118	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847599	GCA_000392815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/815/GCA_000392815.1_Ente_faec_79-3_V1	-	79-3
Streptococcus mutans B24Sm2	1225194	PRJNA173255	173255	Terrabacteria group	Firmicutes	2.28914	36.8	-	ALYV01	63	2191	2017	1/24/14	3/24/17	Contig	New York University College of Dentistry	SAMN02641541	GCA_000522705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/705/GCA_000522705.1_out_k41_n4_samp08-contigs.fa	24291226	B24Sm2
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.15219	52.4	-	CQMF01	75	2522	2191	3/23/15	4/11/17	Contig	SC	SAMEA1690364	GCA_001141185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/185/GCA_001141185.1_8727_8_10	-	GCGS106
Enterococcus faecium EnGen0132	1157430	PRJNA88287	88287	Terrabacteria group	Firmicutes	2.61939	38.2	-	AISZ01	5	2656	2435	5/3/13	4/10/17	Scaffold	Broad Institute	SAMN00808959	GCA_000391965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/965/GCA_000391965.1_Ente_faec_9730357-1_V1	-	9730357-1
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15345	41.2	-	CVXT01	96	2079	1908	6/23/15	3/26/17	Contig	SC	SAMEA1032942	GCA_001178025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/025/GCA_001178025.1_6817_2_81	-	EQUI0034
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.21142	67.6	-	DBUI01	212	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06454415	GCA_002307845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/845/GCA_002307845.1_ASM230784v1	28894102	-
Brucella melitensis	29459	PRJNA339717	339717	Proteobacteria	Alphaproteobacteria	3.29498	57.2	-	MDXK01	62	3149	2778	9/2/16	9/16/16	Contig	Sardarkrushinagar Dantiwada Agricultural University	SAMN05603589	GCA_001857585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/585/GCA_001857585.1_ASM185758v1	-	SKN25
Thermosipho melanesiensis	46541	PRJNA231770	231770	Thermotogae	Thermotogae	1.91534	31.4	chromosome:NZ_CP007389.1/CP007389.1	-	1	1980	1877	1/10/17	4/6/17	Complete Genome	University of Oslo	SAMN02650334	GCA_001941385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/385/GCA_001941385.1_ASM194138v1	-	431
Corynebacterium diphtheriae bv. mitis	1806053	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.39313	53.6	-	LSXO01	55	2314	2117	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497008	GCA_002203735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/735/GCA_002203735.1_S101	-	4774
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.69483	47.1	-	CTKK01	86	4352	4185	3/26/15	3/26/17	Scaffold	SC	SAMEA980163	GCA_001223145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/145/GCA_001223145.1_4976_1_5	-	YE46/02
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.23046	59.8	-	FCFW01	27	4984	4842	1/21/16	3/27/17	Scaffold	SC	SAMEA2273901	GCA_001537205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/205/GCA_001537205.1_12082_2_37	-	2880STDY5682828
Lactobacillus plantarum	1590	PRJNA283610	283610	Terrabacteria group	Firmicutes	3.34069	44.3	-	LEBV01	29	3299	3095	12/3/16	3/28/17	Contig	"Faculty of Agro-industry, Prince of Songkla University, wageningen university"	SAMN03654467	GCA_001888775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/888/775/GCA_001888775.1_ASM188877v1	-	P14
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.73534	31.3	-	LBDZ01	47	1807	1698	10/27/15	3/18/17	Contig	FDA	SAMN03344565	GCA_001417335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/335/GCA_001417335.1_ASM141733v1	-	CVM N44396F
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.50735	32.7	-	CUDN01	93	2506	2361	3/31/15	3/26/17	Scaffold	SC	SAMEA1035047	GCA_001238865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/865/GCA_001238865.1_7067_4_53	-	51-29
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.91887	55.1	-	JZCV01	102	4863	4600	3/20/15	3/25/17	Scaffold	University of Minnesota	SAMN03333172	GCA_000958695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/695/GCA_000958695.1_ASM95869v1	26438492	MNCRE35
Cronobacter sakazakii	28141	PRJNA248266	248266	Proteobacteria	Gammaproteobacteria	4.30791	56.2	-	JNDB01	354	-	-	1/25/17	8/9/17	Scaffold	"Nottingham Trent University, UK"	SAMN02796098	GCA_001971255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/255/GCA_001971255.1_ASM197125v1	-	150
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96558	64.2	-	FVAU01	15	4905	4767	3/10/17	3/18/17	Contig	SC	SAMEA1969055	GCA_900130785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/785/GCA_900130785.1_10665_3_29	-	199
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.56442	64.1	-	DGNY01	47	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450672	GCA_002389165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/165/GCA_002389165.1_ASM238916v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.97167	66.9	-	LPEC01	164	7267	6836	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449450	GCA_001530285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/285/GCA_001530285.1_ASM153028v1	-	MSMB1206WGS
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.17239	54.8	-	LPQN01	88	5185	4939	12/21/15	3/27/17	Contig	JCVI	SAMN04252895	GCA_001472035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/035/GCA_001472035.1_SMART_278.v1	-	SMART_278
Pseudomonas sp. Eur1 9.41	378534	PRJNA239515	239515	Proteobacteria	Gammaproteobacteria	6.33108	60	-	JQLM01	2	5886	5581	8/28/14	4/17/17	Contig	DOE Joint Genome Institute	SAMN02744049	GCA_000744215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/215/GCA_000744215.1_ASM74421v1	-	Eur1 9.41
Streptomyces sp. NRRL S-813	1463919	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.4804	71	-	JODG01	666	9625	8742	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645439	GCA_000718945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/945/GCA_000718945.1_ASM71894v1	-	NRRL S-813
Bacillus sp. MB353a	1982041	PRJNA357966	357966	Terrabacteria group	Firmicutes	5.48995	35.3	-	NEOT01	170	5947	5574	6/29/17	7/1/17	Contig	Fatima Jinnah Women University	SAMN06163041	GCA_002211135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/135/GCA_002211135.1_ASM221113v1	-	MB353a
Acinetobacter sp. ANC 3813	1977873	PRJNA380882	380882	Proteobacteria	Gammaproteobacteria	3.85792	43	-	NEGK01	21	3734	3568	5/15/17	5/23/17	Contig	National Institute of Public Health	SAMN06641961	GCA_002135435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/435/GCA_002135435.1_ASM213543v1	-	ANC 3813
Clostridium sp. CAG:451	1262809	PRJEB887	206846	Terrabacteria group	Firmicutes	1.30057	27.8	-	CBJN01	61	1356	1322	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138799	GCA_000438295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/295/GCA_000438295.1_MGS451	-	-
Staphylococcus sp. HMSC34D01	1608859	PRJNA274511	274511	Terrabacteria group	Firmicutes	2.88994	32.6	-	LTMY01	90	3050	2927	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498857	GCA_001838745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/745/GCA_001838745.1_ASM183874v1	-	HMSC34D01
Streptococcus sp. UBA4344	1947564	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.92251	36.9	-	DGTE01	49	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456579	GCA_002393675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/675/GCA_002393675.1_ASM239367v1	28894102	-
Mycobacterium sp. SWH-M5	1490483	PRJNA244917	244917	Terrabacteria group	Actinobacteria	6.8294	67	-	JMHS01	307	6690	6246	12/15/16	4/16/17	Contig	The University of Hong Kong	SAMN02729875	GCA_001905305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/305/GCA_001905305.1_ASM190530v1	-	SWH-M5
Mycobacterium sp. SWH-M1	1490485	PRJNA244914	244914	Terrabacteria group	Actinobacteria	5.63949	67.8	-	JMHQ01	326	5608	5188	12/15/16	4/16/17	Contig	The University of Hong Kong	SAMN02729863	GCA_001905565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/565/GCA_001905565.1_ASM190556v1	-	SWH-M1
Streptococcus sp. UBA4235	1947563	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.13652	37.4	-	DGXJ01	114	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450915	GCA_002395575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/575/GCA_002395575.1_ASM239557v1	28894102	-
Staphylococcus sp. HMSC34G04	1608860	PRJNA274512	274512	Terrabacteria group	Firmicutes	2.50424	31.9	-	LTMX01	92	2461	2336	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498858	GCA_001838765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/765/GCA_001838765.1_ASM183876v1	-	HMSC34G04
Clostridium sp. CAG:273	1262789	PRJEB805	206775	Terrabacteria group	Firmicutes	1.34034	26.9	-	CBJR01	104	1208	1183	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138802	GCA_000438355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/355/GCA_000438355.1_MGS273	-	-
Acinetobacter sp. 243_ASPC	1579345	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.69713	42.6	-	JVOR01	143	3549	3370	7/10/15	4/6/17	Scaffold	University of Washington	SAMN03197433	GCA_001054715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/715/GCA_001054715.1_ASM105471v1	26230489	243_ASPC
Bacillus sp. KbaL1	1978340	PRJNA380691	380691	Terrabacteria group	Firmicutes	5.66754	35	-	NELW01	70	6007	5697	7/25/17	7/28/17	Contig	UCDavis	SAMN06646346	GCA_002233595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/595/GCA_002233595.1_ASM223359v1	-	KbaL1
Streptomyces sp. NRRL S-575	1463915	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.6869	71.8	-	JODJ01	142	7909	7495	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645442	GCA_000718955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/718/955/GCA_000718955.1_ASM71895v1	-	NRRL S-575
Pseudomonas sp. H2	658612	PRJNA261945	261945	Proteobacteria	Gammaproteobacteria	5.79041	62.6	-	JRPO01	132	5208	5041	10/3/14	4/17/17	Contig	University of Idaho	SAMN03077700	GCA_000763225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/225/GCA_000763225.1_ASM76322v1	25838493	H2
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.88174	54.8	-	LPQM01	65	4803	4572	12/21/15	3/27/17	Contig	JCVI	SAMN04252896	GCA_001472055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/055/GCA_001472055.1_SMART_286.v1	-	SMART_286
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.60388	67.3	-	LPEN01	138	6946	6549	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449461	GCA_001530305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/305/GCA_001530305.1_ASM153030v1	-	MSMB1264WGS
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.3663	63.1	-	DGRJ01	41	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450361	GCA_002389895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/895/GCA_002389895.1_ASM238989v1	28894102	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21241	64.1	-	FVBD01	9	5326	5151	3/10/17	3/18/17	Contig	SC	SAMEA2070435	GCA_900130795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/795/GCA_900130795.1_10665_3_30	-	200
Cronobacter sakazakii	28141	PRJNA248105	248105	Proteobacteria	Gammaproteobacteria	4.48424	56.1	-	JNCY01	71	-	-	1/25/17	8/9/17	Scaffold	"Nottingham Trent University, UK"	SAMN02786801	GCA_001971285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/285/GCA_001971285.1_ASM197128v1	-	1219
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.86052	55.2	-	JZCW01	124	4800	4523	3/20/15	3/25/17	Scaffold	University of Minnesota	SAMN03333173	GCA_000958725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/725/GCA_000958725.1_ASM95872v1	26438492	MNCRE86
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.45833	32.8	-	CUEO01	18	2400	2265	3/31/15	3/26/17	Scaffold	SC	SAMEA1035109	GCA_001239225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/225/GCA_001239225.1_7067_4_79	-	2263-3461
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.71788	31.3	-	LBDX01	65	1777	1671	10/27/15	3/18/17	Contig	FDA	SAMN03344567	GCA_001417365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/365/GCA_001417365.1_ASM141736v1	-	CVM N44505F
Lactobacillus plantarum	1590	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.18506	44.5	-	MJHG01	94	3148	2929	2/1/17	3/29/17	Contig	ETH Zurich	SAMN05717714	GCA_001981585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/585/GCA_001981585.1_ASM198158v1	-	RI-048
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.27566	59.9	-	FCHS01	32	5053	4866	1/21/16	3/27/17	Scaffold	SC	SAMEA2273939	GCA_001537225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/225/GCA_001537225.1_12082_2_72	-	2880STDY5682866
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.61636	47	-	CTIR01	86	4387	4118	3/26/15	3/26/17	Scaffold	SC	SAMEA980139	GCA_001223425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/425/GCA_001223425.1_5749_7_2	-	YE203/02
Corynebacterium diphtheriae bv. belfanti	2014537	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.3523	53.5	-	LSXP01	42	2274	2069	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497007	GCA_002203745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/745/GCA_002203745.1_S102	-	4766
Francisella persica ATCC VR-331	1086726	PRJNA73171	73171	Proteobacteria	Gammaproteobacteria	1.54077	31.4	chromosome:NZ_CP013022.1/CP013022.1	-	1	1502	1079	6/1/16	4/12/17	Complete Genome	Swedish Defence Research Agency	SAMN00993447	GCA_001653955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/955/GCA_001653955.1_ASM165395v1	-	ATCC VR-331
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.44881	66.4	-	DBUR01	43	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06452548	GCA_002308015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/308/015/GCA_002308015.1_ASM230801v1	28894102	-
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.17278	41.2	-	CWBU01	84	2126	1950	6/23/15	3/26/17	Contig	SC	SAMEA1032944	GCA_001178045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/045/GCA_001178045.1_6903_5_76	-	EQUI0125
Enterococcus faecium EnGen0136	1157431	PRJNA88289	88289	Terrabacteria group	Firmicutes	2.65436	38.2	-	AITA01	21	2691	2432	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808960	GCA_000391985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/391/985/GCA_000391985.1_Ente_faec_9731349-1_V1	-	9731349-1
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.10189	52.6	-	CQJR01	78	2464	2137	3/23/15	4/11/17	Contig	SC	SAMEA1690330	GCA_001143605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/605/GCA_001143605.1_8727_8_76	-	GCGS172
Streptococcus mutans B102SM-B	1225195	PRJNA173256	173256	Terrabacteria group	Firmicutes	2.0952	36.8	-	ALYW01	104	2099	1976	1/24/14	3/24/17	Contig	New York University College of Dentistry	SAMN02641542	GCA_000522725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/725/GCA_000522725.1_out_k27_n4_samp09-contigs.fa	24291226	B102SM-B
Enterococcus faecalis EnGen0345	1169284	PRJNA157737	157737	Terrabacteria group	Firmicutes	3.10989	37.5	-	ASCY01	14	3158	2995	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847600	GCA_000392835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/835/GCA_000392835.1_Ente_faec_E99_V1	-	E99
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	4.21062	28.3	-	LFRC01	124	4138	3899	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779975	GCA_001574255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/255/GCA_001574255.1_ASM157425v1	26939550	SU0801
Klebsiella pneumoniae LCT-KP182	1352932	PRJNA209228	209228	Proteobacteria	Gammaproteobacteria	5.80174	56.9	-	ATRN01	7	5871	5561	7/17/13	2/21/17	Scaffold	BGI-shenzhen	SAMN02469374	GCA_000441835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/835/GCA_000441835.1_LCT-KP182_for_vertion_2.04_of_Klebsiella_pneumoniae_genome	24407631	LCT-KP182
Bacillus subtilis subsp. subtilis	135461	PRJNA335940	335940	Terrabacteria group	Firmicutes	2.68033	44.1	chromosome:CP016789.1	-	1	2824	2691	8/3/16	8/3/16	Chromosome	University of Goettingen	SAMN05467341	GCA_001698525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/525/GCA_001698525.1_ASM169852v1	-	PS38
Vibrio parahaemolyticus S118	1394653	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.13468	45.1	-	AWJH01	722	4878	4675	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338967	GCA_000490075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/075/GCA_000490075.1_S118	-	S118
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.01863	38	-	MLNS01	359	2114	1819	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297084	GCA_001869445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/445/GCA_001869445.1_ASM186944v1	27118061	AWRIB465
Brucella abortus 94-1313	1328354	PRJNA200938	200938	Proteobacteria	Alphaproteobacteria	3.28596	57.2	-	ATGR01	5	3382	3154	6/21/13	3/24/17	Contig	Broad Institute	SAMN02092517	GCA_000413735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/735/GCA_000413735.1_Bruc_abor_biovar_1_94-1313_V1	-	94-1313
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.81721	32.3	-	MRLG01	99	1869	1578	4/19/17	4/22/17	Scaffold	FOI Swedish Defence Research Agency	SAMN03773729	GCA_002100375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/375/GCA_002100375.1_ASM210037v1	28348839	F0775
Clostridioides difficile DA00244	1151352	PRJNA85879	85879	Terrabacteria group	Firmicutes	4.06764	28.5	-	AVKA01	15	3734	3563	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01978899	GCA_000450565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/565/GCA_000450565.2_ASM45056v2	-	DA00244
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.0148	47.5	-	JSUA01	110	3823	3657	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104868	GCA_000788935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/935/GCA_000788935.1_ASM78893v1	25538191	2012HC-32
Bacillus thuringiensis serovar graciosensis	180857	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.86529	35.2	-	NFDP01	79	6365	5734	5/17/17	6/15/17	Scaffold	Huazhong Agricultural University	SAMN05934538	GCA_002146885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/885/GCA_002146885.1_ASM214688v1	-	BGSC 4CD1
Burkholderia pseudomallei ABCPW 1	1434207	PRJNA230741	230741	Proteobacteria	Betaproteobacteria	7.50373	67.8	-	JQIJ01	3	7749	7159	11/11/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN03004398	GCA_000774965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/965/GCA_000774965.1_BCW_23	25676747	ABCPW 1
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.26306	67	-	MUSY01	161	7940	7511	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001891	GCA_001993395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/395/GCA_001993395.1_ASM199339v1	-	VC10526
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.57685	50.8	-	FTVL01	348	5057	4381	1/28/17	2/26/17	Contig	SC	SAMEA2054581	GCA_900158385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/385/GCA_900158385.1_9803_4_36	-	2090STDY5461854
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.35339	38.3	-	FJAO01	19	3024	2911	2/20/16	3/27/17	Contig	SC	SAMEA2058280	GCA_900050185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/185/GCA_900050185.1_10771_1_25	-	2531STDY5467306
Pseudomonas syringae	317	PRJNA387592	387592	Proteobacteria	Gammaproteobacteria	6.27197	59.1	-	NHSS01	224	5793	5336	9/20/17	9/22/17	Contig	Max Planck Institute 	SAMN07158961	GCA_002318665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/665/GCA_002318665.1_ASM231866v1	28880925	RMX.24.a.1
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.14469	41.3	-	CEJD01	78	2050	1956	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233997	GCA_000938795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/795/GCA_000938795.1_Velvet_assembly	-	S12X
Streptococcus agalactiae BSU96	1154830	PRJNA86317	86317	Terrabacteria group	Firmicutes	2.08405	35.3	-	ALRH01	32	2167	2025	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991132	GCA_000289955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/955/GCA_000289955.1_ASM28995v1	-	BSU96
Acinetobacter baumannii	470	PRJNA295430	295430	Proteobacteria	Gammaproteobacteria	4.13102	39	-	LKAG01	57	4019	3864	10/29/15	3/18/17	Scaffold	University of aberdeen	SAMN04054216	GCA_001420515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/515/GCA_001420515.1_ASM142051v1	-	Ab Crete
Pseudomonas aeruginosa BL12	1402553	PRJNA219915	219915	Proteobacteria	Gammaproteobacteria	7.47218	65.5	-	AXPO01	19	7174	6926	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360725	GCA_000480905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/905/GCA_000480905.1_Pseu_aeru_BL12_V1	-	BL12
Shigella flexneri 2002127	1434184	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.42179	50.5	-	AZQK01	305	4909	4231	1/29/14	2/23/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437419	GCA_000566625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/625/GCA_000566625.1_ASM56662v1	-	2002127
Bacillus anthracis str. UR-1	1211117	PRJNA170826	170826	Terrabacteria group	Firmicutes	5.44661	35.1	-	ALNY01	109	5773	5738	8/21/12	1/8/14	Contig	"Bundeswehr Institute of Microbiology, Munich, Germany"	SAMN02469406	GCA_000292565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/565/GCA_000292565.1_ASM29256v1	23045504	UR-1
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.81397	35	-	JQQK01	334	4426	3989	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949518	GCA_001568175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/175/GCA_001568175.1_ASM156817v1	26833181	56143
Streptococcus pyogenes ABC020035446	1439091	PRJNA233009	233009	Terrabacteria group	Firmicutes	1.78514	38.5	-	JJIP01	4	1795	1682	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567358	GCA_000631485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/485/GCA_000631485.1_Stre_pyog_ABC020035446_V1	-	ABC020035446
Neisseria meningitidis 63041	1095694	PRJNA76319	76319	Proteobacteria	Betaproteobacteria	2.1841	51.9	-	ANRF01	27	2538	2180	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055186	GCA_000327665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/665/GCA_000327665.2_ASM32766v2	-	63041
Helicobacter pylori GAM93Bi	1159057	PRJNA89285	89285	Proteobacteria	delta/epsilon subdivisions	1.61862	39.2	-	APEG01	49	1592	1386	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436788	GCA_000345665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/665/GCA_000345665.2_ASM34566v2	-	GAM93Bi
Streptococcus pneumoniae GA08780	760758	PRJNA48673	48673	Terrabacteria group	Firmicutes	2.14527	39.7	-	AGQJ01	11	2367	2052	10/25/11	3/8/17	Contig	Institute for Genome Sciences	SAMN00792727	GCA_000233285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/285/GCA_000233285.2_ASM23328v2	-	GA08780
Campylobacter coli	195	PRJNA285481	285481	Proteobacteria	delta/epsilon subdivisions	1.72051	31.4	chromosome:CP011777.1	-	1	1801	1637	10/2/15	12/23/15	Complete Genome	University Medical Center Goettingen	SAMN03754337	GCA_001305715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/305/715/GCA_001305715.1_ASM130571v1	-	BFR-CA-9557
Mycobacterium tuberculosis PanR0604	1352576	PRJNA210053	210053	Terrabacteria group	Actinobacteria	4.38803	65.3995	chromosome:NZ_CM002120.1/CM002120.1	ATRV01	1	4306	4060	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471051	GCA_000445365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/365/GCA_000445365.1_fedora0604_IS	23884993	PanR0604
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.69713	68.8	-	LNBP01	241	5518	5044	4/4/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04226733	GCA_001610055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/055/GCA_001610055.1_ASM161005v1	-	MAH-P-2014-08
Bacillus cereus VD146	1053236	PRJNA70439	70439	Terrabacteria group	Firmicutes	6.10938	35.2	-	AHFE01	21	6302	5893	5/16/13	3/24/17	Scaffold	Broad Institute	SAMN02596868	GCA_000399425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/425/GCA_000399425.1_Baci_cere_VD146_V1	-	VD146
Staphylococcus epidermidis FS1	1008454	PRJNA304593	304593	Terrabacteria group	Firmicutes	2.55145	31.9	-	LOAT01	91	2528	2314	12/18/15	3/27/17	Contig	Aarhus University	SAMN04304556	GCA_001469335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/335/GCA_001469335.1_ASM146933v1	26924200	FS1
Listeria monocytogenes Lm19860	1403328	PRJNA219696	219696	Terrabacteria group	Firmicutes	3.05484	37.9	-	JHUU01	14	3098	3016	4/8/14	2/26/17	Scaffold	DOE Joint Genome Institute	SAMN02769638	GCA_000619785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/785/GCA_000619785.1_ASM61978v1	-	Lm19860
Yersinia pestis PY-36	992148	PRJNA64323	64323	Proteobacteria	Gammaproteobacteria	4.71691	47.5	-	AKSH01	591	4656	4250	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141469	GCA_000269265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/265/GCA_000269265.1_ASM26926v1	-	PY-36
Campylobacter jejuni HB-CJGB-QYT	1316913	PRJNA196569	196569	Proteobacteria	delta/epsilon subdivisions	1.68767	30.5	-	ATBM01	11	1774	1669	1/15/16	3/20/17	Scaffold	"State Key Laboratory for Infectious Disease Prevention and Control, and National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China"	SAMN04412548	GCA_001516405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/405/GCA_001516405.1_ASM151640v1	-	HB-CJGB-QYT
Francisella persica ATCC VR-331	1086726	PRJNA287166	287166	Proteobacteria	Gammaproteobacteria	1.51668	31.4	chromosome:NZ_CP012505.1/CP012505.1	-	1	1485	1067	8/27/15	4/11/17	Complete Genome	University of Nebraska	SAMN03777003	GCA_001275365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/365/GCA_001275365.1_ASM127536v1	26747442	FSC845
Leptotrichia sp. oral taxon 212	712357	PRJNA282954	282954	Fusobacteria	Fusobacteriia	2.4449	31.4	chromosome:NZ_CP012410.1/CP012410.1	-	1	2292	2148	8/26/15	4/16/17	Complete Genome	The Forsyth Institute	SAMN03976113	GCA_001274535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/274/535/GCA_001274535.1_ASM127453v1	-	W10393
Defluviitoga tunisiensis	1006576	PRJEB7786	276650	Thermotogae	Thermotogae	2.0531	31.4	chromosome I:NZ_LN824141.1/LN824141.1	-	1	1878	1794	2/27/15	4/17/17	Complete Genome	CEBITEC	SAMEA3139667	GCA_000953715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/715/GCA_000953715.1_DTL3	-	-
Flavobacterium indicum GPTSA100-9 = DSM 17447	1094466	PRJNA73387	73387	FCB group	Bacteroidetes/Chlorobi group	2.99309	31.4	chromosome I:NC_017025.1/HE774682.1	-	1	2779	2679	3/15/12	4/17/17	Complete Genome	French National Institute for Agricultural Research	SAMEA3138809	GCA_000455605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/605/GCA_000455605.1_GPTSA100-9	22582381	GPTSA100-9
Campylobacter jejuni HB-CJGB-LL	1316917	PRJNA196565	196565	Proteobacteria	delta/epsilon subdivisions	1.68091	30.3	-	ATBJ01	8	1757	1627	1/15/16	3/20/17	Scaffold	"State Key Laboratory for Infectious Disease Prevention and Control, and National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China"	SAMN04412550	GCA_001516415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/415/GCA_001516415.1_ASM151641v1	-	HB-CJGB-LL
Yersinia pestis PY-42	992149	PRJNA64325	64325	Proteobacteria	Gammaproteobacteria	4.73231	47.5	-	AKSI01	522	4614	4279	6/15/12	3/27/17	Contig	Institute for Genome Sciences	SAMN02141470	GCA_000269285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/285/GCA_000269285.2_ASM26928v2	-	PY-42
Listeria monocytogenes Lm26686	1403327	PRJNA219694	219694	Terrabacteria group	Firmicutes	2.92702	37.9	-	JHUY01	14	2945	2868	4/8/14	2/26/17	Scaffold	DOE Joint Genome Institute	SAMN02769642	GCA_000619865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/865/GCA_000619865.1_ASM61986v1	-	Lm26686
Staphylococcus epidermidis	1282	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.5977	32.2	-	LORL01	3	2579	2399	12/21/15	3/27/17	Contig	US Food and Drug Administration 	SAMN03996302	GCA_001473265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/265/GCA_001473265.1_ASM147326v1	-	FDAARGOS_157
Bacillus cereus VD214	1053245	PRJNA70457	70457	Terrabacteria group	Firmicutes	5.69015	35.1	-	AHFN01	15	6067	5697	5/16/13	3/24/17	Scaffold	Broad Institute	SAMN02596877	GCA_000399445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/445/GCA_000399445.1_Baci_cere_VD214_V1	-	VD214
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.07889	69.2	-	LNBN01	178	4865	4521	4/4/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04226729	GCA_001610065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/065/GCA_001610065.1_ASM161006v1	-	MAH-P-709-08
Mycobacterium tuberculosis PanR0605	1352577	PRJNA210054	210054	Terrabacteria group	Actinobacteria	4.4052	65.4996	chromosome:NZ_CM002123.1/CM002123.1	ATRW01	1	4269	4053	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471060	GCA_000445515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/515/GCA_000445515.1_fedora0605_IS	23884993	PanR0605
Mycoplasma gallisepticum str. F	708616	PRJNA43301	43301	Terrabacteria group	Tenericutes	0.977612	31.4	chromosome:NC_017503.1/CP001873.1	-	1	808	722	1/29/10	3/29/17	Complete Genome	University of Connecticut	SAMN02604155	GCA_000025385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/385/GCA_000025385.1_ASM2538v1	20123709	F
Streptococcus pneumoniae GA19690	760800	PRJNA48759	48759	Terrabacteria group	Firmicutes	2.01675	39.9	-	AGQK01	7	2229	1963	10/25/11	3/9/17	Contig	Institute for Genome Sciences	SAMN00792769	GCA_000233305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/305/GCA_000233305.2_ASM23330v2	-	GA19690
Helicobacter pylori GAM96Ai	1159058	PRJNA89287	89287	Proteobacteria	delta/epsilon subdivisions	1.65675	39.4	-	APEH01	71	1630	1461	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436789	GCA_000345685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/685/GCA_000345685.2_ASM34568v2	-	GAM96Ai
Neisseria meningitidis 97021	1095697	PRJNA76325	76325	Proteobacteria	Betaproteobacteria	2.19134	51.8	-	ANRC01	20	2598	2199	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055189	GCA_000327685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/685/GCA_000327685.2_ASM32768v2	-	97021
Streptococcus pyogenes ABC020033919	1439080	PRJNA233008	233008	Terrabacteria group	Firmicutes	1.80679	38.6	-	JJIQ01	5	1802	1683	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567357	GCA_000631505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/505/GCA_000631505.1_Stre_pyog_ABC020033919_V1	-	ABC020033919
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.89196	35.2	-	JQQL01	461	4525	3985	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949520	GCA_001568205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/205/GCA_001568205.1_ASM156820v1	26833181	56201
Bacillus anthracis str. BF1	1213182	PRJNA171093	171093	Terrabacteria group	Firmicutes	5.43453	35.0634	plasmid pXO2:AMDT01000056.1	AMDT01	56	5774	5699	9/7/12	1/8/14	Contig	"Bundeswehr Institute of Microbiology, Munich, Germany"	SAMN02469407	GCA_000295695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/695/GCA_000295695.1_ASM29569v1	23105087	BF1
Shigella flexneri 2002141	1434185	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.42591	50.5	-	AZQL01	294	4900	4186	1/29/14	2/23/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437420	GCA_000566645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/645/GCA_000566645.1_ASM56664v1	-	2002141
Pseudomonas aeruginosa BL11	1402552	PRJNA219914	219914	Proteobacteria	Gammaproteobacteria	7.08297	65.7	-	AXPP01	8	6704	6502	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360724	GCA_000480925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/925/GCA_000480925.1_Pseu_aeru_BL11_V1	-	BL11
Acinetobacter baumannii	470	PRJNA294952	294952	Proteobacteria	Gammaproteobacteria	3.97783	38.9	-	LKMB01	82	3888	3661	11/5/15	6/4/17	Scaffold	LAU	SAMN04089926	GCA_001432275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/275/GCA_001432275.1_ASM143227v1	26823599	ACMH-6201
Streptococcus agalactiae BSU165	1154831	PRJNA86319	86319	Terrabacteria group	Firmicutes	2.16901	35.3	-	ALRI01	30	2247	2123	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991133	GCA_000289975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/975/GCA_000289975.1_ASM28997v1	-	BSU165
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.16943	41	-	CEEQ01	60	2163	2019	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233937	GCA_000938835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/835/GCA_000938835.1_Velvet_assembly	-	LS6V
Pseudomonas syringae	317	PRJNA387592	387592	Proteobacteria	Gammaproteobacteria	6.22411	58.9	-	NHSW01	382	5715	5339	9/20/17	9/22/17	Contig	Max Planck Institute 	SAMN07158957	GCA_002318715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/715/GCA_002318715.1_ASM231871v1	28880925	LP217a
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.45335	38.3	-	FJBZ01	34	3153	3023	2/20/16	3/27/17	Contig	SC	SAMEA2059991	GCA_900050195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/195/GCA_900050195.1_10771_1_54	-	2531STDY5467335
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.58592	50.8	-	FTVM01	340	5079	4383	1/28/17	2/26/17	Contig	SC	SAMEA2054582	GCA_900158395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/395/GCA_900158395.1_9803_4_37	-	2090STDY5461855
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.79627	67	-	MUTA01	167	7450	7038	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001893	GCA_001993415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/415/GCA_001993415.1_ASM199341v1	-	VC10926
Burkholderia pseudomallei	28450	PRJNA231484	231484	Proteobacteria	Betaproteobacteria	7.67312	67.7	-	JQIM01	4	7979	7317	11/11/14	4/10/17	Scaffold	Los Alamos National Laboratory	SAMN03009071	GCA_000774975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/975/GCA_000774975.1_BPG	25676747	MSHR44
Bacillus thuringiensis serovar malayensis	180893	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.17708	35.1	-	NFCR01	104	6487	5992	5/17/17	6/15/17	Scaffold	Huazhong Agricultural University	SAMN05934507	GCA_002146975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/146/975/GCA_002146975.1_ASM214697v1	-	BGSC 4AV1
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.01201	47.5	-	JSUD01	111	3808	3655	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104871	GCA_000788955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/955/GCA_000788955.1_ASM78895v1	25538191	2012HC-35
Clostridioides difficile DA00245	1151353	PRJNA85881	85881	Terrabacteria group	Firmicutes	3.98594	28.4	-	AVKB01	336	3787	3555	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766671	GCA_000450585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/585/GCA_000450585.2_ASM45058v2	-	DA00245
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.83177	32.3	-	MRKZ01	183	1956	1529	4/19/17	4/22/17	Scaffold	FOI Swedish Defence Research Agency	SAMN03773839	GCA_002100445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/445/GCA_002100445.1_ASM210044v1	28348839	FDC113
Brucella abortus 01-0648	1328355	PRJNA200939	200939	Proteobacteria	Alphaproteobacteria	3.28696	57.2	-	ATGQ01	5	3384	3155	6/21/13	3/24/17	Contig	Broad Institute	SAMN02092518	GCA_000413755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/755/GCA_000413755.1_Bruc_abor_biovar_1_01-0648_V1	-	01-0648
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.85835	37.8	-	MLNT01	227	1915	1617	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297085	GCA_001869465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/465/GCA_001869465.1_ASM186946v1	27118061	AWRIB467
Vibrio parahaemolyticus S117	1394652	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.06444	45.3	-	AWJI01	773	4826	4609	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338966	GCA_000490095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/095/GCA_000490095.1_S117	-	S117
Bacillus subtilis subsp. subtilis	135461	PRJNA343182	343182	Terrabacteria group	Firmicutes	4.21796	42.7	chromosome:CP017313.1	-	1	5248	5099	10/3/16	10/3/16	Chromosome	University of Goettingen	SAMN05781321	GCA_001750765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/765/GCA_001750765.1_ASM175076v1	-	QB5413
Klebsiella pneumoniae LCT-KP289	1352933	PRJNA209227	209227	Proteobacteria	Gammaproteobacteria	6.06816	56.4	-	ATRO01	10	6172	5488	7/17/13	2/21/17	Scaffold	BGI-shenzhen	SAMN02469375	GCA_000441855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/855/GCA_000441855.1_LCT-KP289_for_vertion_2.04_of_Klebsiella_pneumoniae_genome	25015528	LCT-KP289
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	4.09199	28	-	LFQC01	68	3951	3740	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779977	GCA_001574265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/265/GCA_001574265.1_ASM157426v1	26939550	SU0807
Enterococcus faecalis EnGen0346	1169285	PRJNA157739	157739	Terrabacteria group	Firmicutes	2.72323	37.7	-	ASCZ01	4	2696	2574	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847601	GCA_000392855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/855/GCA_000392855.1_Ente_faec_T20_V1	-	T20
Streptococcus mutans B112SM-A	1225196	PRJNA173257	173257	Terrabacteria group	Firmicutes	2.25916	37.1	-	ALYX01	44	2230	2084	1/24/14	3/24/17	Contig	New York University College of Dentistry	SAMN02641543	GCA_000522745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/745/GCA_000522745.1_out_k43_n4_samp10-contigs.fa	24291226	B112SM-A
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14724	52.4	-	CQIA01	81	2512	2184	3/22/15	4/11/17	Contig	SC	SAMEA1690400	GCA_001144185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/185/GCA_001144185.1_8727_8_85	-	GCGS181
Enterococcus faecium EnGen0137	1157432	PRJNA88291	88291	Terrabacteria group	Firmicutes	2.65197	38.2	-	AITB01	8	2707	2481	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808961	GCA_000392005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/005/GCA_000392005.1_Ente_faec_9731352-4_V1	-	9731352-4
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12705	41.2	-	CVYR01	77	2063	1874	6/24/15	3/26/17	Contig	SC	SAMEA1032946	GCA_001178065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/065/GCA_001178065.1_6830_4_91	-	EQUI0236
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.44735	66.9	-	DCDP01	136	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06452951	GCA_002316475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/475/GCA_002316475.1_ASM231647v1	28894102	-
Thermosipho melanesiensis BI429	391009	PRJNA17249	17249	Thermotogae	Thermotogae	1.91524	31.4	chromosome:NC_009616.1/CP000716.1	-	1	1982	1877	6/26/07	3/30/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00623068	GCA_000016905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/905/GCA_000016905.1_ASM1690v1	19307556	BI429
Corynebacterium diphtheriae bv. mitis	1806053	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.3943	53.6	-	LSXT01	54	2313	2114	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497003	GCA_002203775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/775/GCA_002203775.1_S107	-	4726
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.52163	46.8	-	CIJR01	109	4261	4005	4/21/15	3/26/17	Scaffold	SC	SAMEA980128	GCA_001319305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/305/GCA_001319305.1_4976_6_11	-	ERL084423
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.1288	59.9	-	FCHY01	24	4855	4710	1/21/16	3/27/17	Scaffold	SC	SAMEA2273944	GCA_001537245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/245/GCA_001537245.1_12082_2_77	-	2880STDY5682871
Lactobacillus plantarum	1590	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.167	44.6	-	MJHC01	33	3061	2907	2/1/17	3/29/17	Contig	ETH Zurich	SAMN05717710	GCA_001981645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/645/GCA_001981645.1_ASM198164v1	-	RI-011
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.93804	31	-	LBDU01	178	2074	1922	10/27/15	3/18/17	Contig	FDA	SAMN03344570	GCA_001417385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/385/GCA_001417385.1_ASM141738v1	-	CVM N46573F
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.51084	32.6	-	CUCX01	93	2509	2370	3/31/15	4/21/17	Scaffold	SC	SAMEA1035130	GCA_001239425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/425/GCA_001239425.1_7067_4_41	-	51-10
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	5.04708	55.1	-	JZCX01	126	5013	4704	3/20/15	3/25/17	Scaffold	University of Minnesota	SAMN03333174	GCA_000958735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/735/GCA_000958735.1_ASM95873v1	26438492	MNCRE3
Cronobacter sakazakii	28141	PRJNA248265	248265	Proteobacteria	Gammaproteobacteria	4.39607	56.4	-	JNDA01	497	-	-	1/25/17	8/9/17	Scaffold	"Nottingham Trent University, UK"	SAMN02796096	GCA_001971295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/295/GCA_001971295.1_ASM197129v1	-	721
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21156	64.1	-	FVBN01	11	5328	5151	3/10/17	3/18/17	Contig	SC	SAMEA2068664	GCA_900130805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/805/GCA_900130805.1_10665_3_31	-	201
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.65411	64.4	-	DGGB01	145	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453883	GCA_002391985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/985/GCA_002391985.1_ASM239198v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.37385	67.4	-	LPEP01	96	6708	6369	1/22/16	6/27/17	Contig	Northern Arizona University	SAMN03449463	GCA_001530335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/335/GCA_001530335.1_ASM153033v1	-	MSMB1273WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.14579	55	-	LPQL01	93	5084	4804	12/21/15	3/27/17	Contig	JCVI	SAMN04252897	GCA_001472075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/075/GCA_001472075.1_SMART_291.v1	-	SMART_291
Pseudomonas sp. HMP271	1487922	PRJNA244423	244423	Proteobacteria	Gammaproteobacteria	3.96612	64.5	-	JMFZ01	24	3736	3628	10/9/14	4/9/17	Contig	Hydrocarbon Metagenomic Project	SAMN02726040	GCA_000765155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/155/GCA_000765155.1_ASM76515v1	-	HMP271
Streptomyces sp. NRRL S-87	1463920	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.1507	73.5	-	JOGB01	255	6973	6595	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645444	GCA_000719335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/335/GCA_000719335.1_ASM71933v1	-	NRRL S-87
Bacillus sp. KbaB1	1972845	PRJNA380691	380691	Terrabacteria group	Firmicutes	5.45639	35.3	-	NELX01	106	5861	5571	7/25/17	7/28/17	Contig	UCDavis	SAMN06646345	GCA_002233615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/615/GCA_002233615.1_ASM223361v1	-	KbaB1
Acinetobacter sp. BMW17	1795629	PRJNA310975	310975	Proteobacteria	Gammaproteobacteria	3.56013	41.5	-	LSOD01	71	3446	3229	3/16/16	4/6/17	Scaffold	"KIIT School of Biotechnology, KIIT University"	SAMN04457777	GCA_001592855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/855/GCA_001592855.1_ASM159285v1	-	BMW17
Clostridium sp. CAG:628	1262829	PRJEB964	206915	Terrabacteria group	Firmicutes	1.07964	26.2	-	CBKB01	35	1124	1091	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138805	GCA_000438415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/415/GCA_000438415.1_MGS628	-	-
Staphylococcus sp. HMSC34H10	1608862	PRJNA274514	274514	Terrabacteria group	Firmicutes	2.89677	32.8	-	LTMW01	141	3062	2899	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498863	GCA_001838775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/775/GCA_001838775.1_ASM183877v1	-	HMSC34H10
Mycobacterium sp. ST-F2	1490484	PRJNA244918	244918	Terrabacteria group	Actinobacteria	5.92312	66.8	-	JMHT01	134	5633	5398	12/15/16	4/16/17	Contig	The University of Hong Kong	SAMN02729876	GCA_001905655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/655/GCA_001905655.1_ASM190565v1	-	ST-F2
Mycobacterium sp. SWH-M3	1490482	PRJNA244915	244915	Terrabacteria group	Actinobacteria	8.32624	66.7	-	JMHR01	441	8309	7711	12/15/16	4/16/17	Contig	The University of Hong Kong	SAMN02729864	GCA_001907615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/615/GCA_001907615.1_ASM190761v1	-	SWH-M3
Staphylococcus sp. HMSC35D08	1608863	PRJNA274515	274515	Terrabacteria group	Firmicutes	2.77313	32.6	-	LTMV01	56	2896	2741	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498865	GCA_001838805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/805/GCA_001838805.1_ASM183880v1	-	HMSC35D08
Clostridium sp. A254.MGS-251	1637498	PRJNA277012	277012	Terrabacteria group	Firmicutes	1.98393	39.4	-	LARA01	224	-	-	4/24/15	6/10/15	Scaffold	The Mayo Clinic	SAMN03449994	GCA_000980325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/325/GCA_000980325.1_ASM98032v1	26021920	-
Acinetobacter sp. NRRL B-65365	1785092	PRJNA309605	309605	Proteobacteria	Gammaproteobacteria	4.00087	41.3	-	LRPD01	89	3826	3683	4/4/16	4/6/17	Scaffold	NCAUR-ARS-USDA	SAMN04437122	GCA_001605865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/865/GCA_001605865.1_ASM160586v1	-	NRRL B-65365
Bacillus sp. LYLB4	1961828	PRJNA375968	375968	Terrabacteria group	Firmicutes	4.12451	46	-	NBBC01	35	4153	3954	8/1/17	8/3/17	Contig	Beijing Radiation Center	SAMN06348996	GCA_002237975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/975/GCA_002237975.1_ASM223797v1	-	LYLB4
Streptomyces sp. NRRL F-2664	1463842	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.98468	72.1	-	JOFX01	673	7095	6528	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645275	GCA_000719345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/345/GCA_000719345.1_ASM71934v1	-	NRRL F-2664
Pseudomonas sp. 11/12A	1506582	PRJNA251762	251762	Proteobacteria	Gammaproteobacteria	6.77845	59.6	-	JUGV01	2	6302	6052	12/9/14	4/9/17	Contig	DOE Joint Genome Institute	SAMN02841242	GCA_000800055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/055/GCA_000800055.1_ASM80005v1	25700412	11/12A
Enterobacter hormaechei	158836	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.83064	54.9	-	LPQK01	58	4720	4486	12/21/15	3/27/17	Contig	JCVI	SAMN04252898	GCA_001472085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/085/GCA_001472085.1_SMART_309.v1	-	SMART_309
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.62103	67.1	-	LPFY01	154	6987	6602	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449498	GCA_001530355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/355/GCA_001530355.1_ASM153035v1	-	MSMB1516WGS
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.4905	62.9	-	DGGE01	38	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453888	GCA_002392045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/045/GCA_002392045.1_ASM239204v1	28894102	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21192	64.1	-	FVAK01	10	5325	5147	3/10/17	3/18/17	Contig	SC	SAMEA2070533	GCA_900130825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/825/GCA_900130825.1_10665_3_33	-	203
Cronobacter sakazakii	28141	PRJNA248271	248271	Proteobacteria	Gammaproteobacteria	4.52888	56	-	JNDF01	335	-	-	1/25/17	8/9/17	Scaffold	"Nottingham Trent University, UK"	SAMN02796168	GCA_001971325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/325/GCA_001971325.1_ASM197132v1	-	1225
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.96583	55.1	-	JZCY01	84	4923	4680	3/20/15	3/25/17	Scaffold	University of Minnesota	SAMN03333175	GCA_000958745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/745/GCA_000958745.1_ASM95874v1	26438492	MNCRE36
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.47936	32.6	-	CUFU01	94	2450	2312	3/31/15	3/26/17	Scaffold	SC	SAMEA1035126	GCA_001239625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/625/GCA_001239625.1_7068_7_24	-	W_139
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.8086	31.1	-	LBDT01	54	1873	1761	10/27/15	3/18/17	Contig	FDA	SAMN03344571	GCA_001417405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/405/GCA_001417405.1_ASM141740v1	-	CVM N46596F
Lactobacillus plantarum	1590	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.1026	44.5	-	MJHJ01	56	3010	2835	2/1/17	3/29/17	Contig	ETH Zurich	SAMN05717718	GCA_001981665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/665/GCA_001981665.1_ASM198166v1	-	RI-189
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.05053	60	-	FCGO01	13	4798	4649	1/21/16	3/27/17	Scaffold	SC	SAMEA2274092	GCA_001537285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/285/GCA_001537285.1_12045_8_16	-	2880STDY5683022
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.58896	47	-	CHYV01	31	4293	4106	4/21/15	3/26/17	Scaffold	SC	SAMEA980130	GCA_001319325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/325/GCA_001319325.1_4976_6_9	-	ERL023784
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.44807	53.5	-	LSXS01	46	2356	2188	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497002	GCA_002203785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/785/GCA_002203785.1_S106	-	4720
Campylobacter coli	195	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.75017	31.3777	chromosome:CP023545.1; plasmid pCFSAN032805_1:CP023546.1; plasmid pCFSAN032805_2:CP023547.1	-	3	1813	1707	10/2/17	10/2/17	Complete Genome	US Food and Drug Administration	SAMN03580886	GCA_002407145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/407/145/GCA_002407145.1_ASM240714v1	-	CFSAN032805
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.41021	66.3	-	DCKI01	393	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454212	GCA_002320635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/635/GCA_002320635.1_ASM232063v1	28894102	-
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.16056	41.1	-	CVZQ01	75	2103	1929	6/24/15	3/26/17	Contig	SC	SAMEA1032947	GCA_001178085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/085/GCA_001178085.1_6903_2_21	-	EQUI0070
Enterococcus faecium EnGen0138	1157433	PRJNA88293	88293	Terrabacteria group	Firmicutes	2.63722	38.3	-	AITC01	7	2696	2444	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808962	GCA_000392025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/025/GCA_000392025.1_Ente_faec_9830091-5_V1	-	9830091-5
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14663	52.4	-	CQJG01	66	2506	2194	3/22/15	4/11/17	Contig	SC	SAMEA1690449	GCA_001144225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/225/GCA_001144225.1_8289_2_67	-	GCGS067
Streptococcus mutans B04Sm5	1225197	PRJNA173258	173258	Terrabacteria group	Firmicutes	2.07762	37	-	ALYY01	81	2055	1901	1/24/14	3/24/17	Contig	New York University College of Dentistry	SAMN02641544	GCA_000522765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/765/GCA_000522765.1_out_k25_n4_samp13-contigs.fa	24291226	B04Sm5
Enterococcus faecalis ATCC 19433	1169286	PRJNA157741	157741	Terrabacteria group	Firmicutes	2.8814	37.7	-	ASDA01	3	2979	2801	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847602	GCA_000392875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/875/GCA_000392875.1_Ente_faec_ATCC_19433_V1	-	ATCC 19433
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	4.13638	28	-	LFQB01	61	4039	3821	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779976	GCA_001574285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/285/GCA_001574285.1_ASM157428v1	26939550	SU0998
Klebsiella pneumoniae 909957	1269006	PRJNA183829	183829	Proteobacteria	Gammaproteobacteria	5.63755	57	-	AXUL01	209	5666	5343	10/25/13	2/21/17	Scaffold	Washington University	SAMN02436803	GCA_000485755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/755/GCA_000485755.1_ASM48575v1	-	909957
Bacillus subtilis	1423	PRJNA384709	384709	Terrabacteria group	Firmicutes	4.95436	55.4	chromosome:CP021137.1	-	1	-	-	5/16/17	6/13/17	Chromosome	Dankook University	SAMN06844203	GCA_002142555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/555/GCA_002142555.1_ASM214255v1	-	DKU_NT_01
Vibrio parahaemolyticus S116	1394651	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.08186	45.2	-	AWJJ01	777	4841	4624	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338965	GCA_000490115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/115/GCA_000490115.1_S116	-	S116
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.86352	37.9	-	MLNY01	168	1923	1637	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297090	GCA_001869485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/485/GCA_001869485.1_ASM186948v1	27118061	AWRIB508
Brucella abortus 01-0585	1328356	PRJNA200940	200940	Proteobacteria	Alphaproteobacteria	3.28622	57.2	-	ATGP01	5	3375	3151	6/21/13	3/24/17	Contig	Broad Institute	SAMN02092519	GCA_000413775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/775/GCA_000413775.1_Bruc_abor_biovar_1_01-0585_V1	-	01-0585
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.77889	32.2	-	MRKR01	124	1832	1545	4/19/17	4/22/17	Scaffold	FOI Swedish Defence Research Agency	SAMN03773885	GCA_002100455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/455/GCA_002100455.1_ASM210045v1	28348839	FDC412
Clostridioides difficile DA00246	1151354	PRJNA85883	85883	Terrabacteria group	Firmicutes	4.09326	28.3	-	AVKC01	57	3800	3629	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766672	GCA_000450605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/605/GCA_000450605.2_ASM45060v2	-	DA00246
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.01475	47.5	-	JSUB01	107	3831	3656	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104869	GCA_000788975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/975/GCA_000788975.1_ASM78897v1	25538191	2012HC-33
Bacillus thuringiensis serovar aizawai	1433	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.72023	34.8	-	NFDV01	316	7106	6591	5/17/17	6/15/17	Scaffold	Huazhong Agricultural University	SAMN05934546	GCA_002147155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/155/GCA_002147155.1_ASM214715v1	-	BGSC 4J2
Burkholderia pseudomallei MSHR3709	1437004	PRJNA231856	231856	Proteobacteria	Betaproteobacteria	7.57719	67.8	-	JRFK01	38	7863	7120	11/11/14	4/10/17	Scaffold	Los Alamos National Laboratory	SAMN03015221	GCA_000775025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/025/GCA_000775025.1_BPW	25676747	MSHR3709
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.69509	66.2	-	MUTB01	218	8298	7899	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001899	GCA_001993435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/435/GCA_001993435.1_ASM199343v1	-	VC7292
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.54428	50.8	-	FTVN01	378	5119	4318	1/28/17	3/2/17	Contig	SC	SAMEA2054632	GCA_900158405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/405/GCA_900158405.1_9803_4_38	-	2090STDY5461856
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.58115	38.2	-	FJCE01	43	3298	3141	2/20/16	3/27/17	Contig	SC	SAMEA2058467	GCA_900050205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/205/GCA_900050205.1_10771_1_58	-	2531STDY5467339
Pseudomonas syringae	317	PRJNA387592	387592	Proteobacteria	Gammaproteobacteria	6.08884	59.3	-	NHSX01	208	5526	5277	9/20/17	9/22/17	Contig	Max Planck Institute 	SAMN07158956	GCA_002318725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/725/GCA_002318725.1_ASM231872v1	28880925	NP29.1a
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03634	41.3	-	CECT01	57	2034	1918	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233871	GCA_000938915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/915/GCA_000938915.1_Velvet_assembly	-	LL-P
Streptococcus agalactiae BSU92	1154832	PRJNA86323	86323	Terrabacteria group	Firmicutes	2.06533	35.3	-	ALRJ01	18	2166	2054	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991135	GCA_000289995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/995/GCA_000289995.1_ASM28999v1	-	BSU92
Acinetobacter baumannii	470	PRJNA308740	308740	Proteobacteria	Gammaproteobacteria	3.7455	38.9873	plasmid unnamed 1:NZ_CM003741.1/CM003741.1; plasmid unnamed 2:NZ_CM003742.1/CM003742.1	LQXZ01	12	3544	3433	2/5/16	3/19/17	Scaffold	"Center for Genomic Sciences, UNAM"	SAMN04407353	GCA_001549575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/575/GCA_001549575.1_ASM154957v1	27013043	MEX11594
Pseudomonas aeruginosa BL10	1402551	PRJNA219913	219913	Proteobacteria	Gammaproteobacteria	6.49954	66.3	-	AXPQ01	3	6132	5971	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360723	GCA_000480945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/945/GCA_000480945.1_Pseu_aeru_BL10_V1	-	BL10
Shigella flexneri 2002142	1434186	PRJNA230538	230538	Proteobacteria	Gammaproteobacteria	4.51076	50.5	-	AZQM01	304	4957	4265	1/29/14	2/23/17	Scaffold	Chinese Center for Disease Control and Prevention (China CDC)	SAMN02437421	GCA_000566665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/665/GCA_000566665.1_ASM56666v1	-	2002142
Bacillus anthracis str. 3154	1248431	PRJNA178572	178572	Terrabacteria group	Firmicutes	5.00269	35.4	-	ANFF01	3	-	-	12/12/12	1/8/14	Contig	Northern Arizona University	SAMN02470705	GCA_000319695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/695/GCA_000319695.1_BA_3154assembly	23599294	3154
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.59951	34.9	-	JQQN01	225	4188	3821	2/24/16	3/27/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949563	GCA_001568215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/215/GCA_001568215.1_ASM156821v1	26833181	56601-V
Streptococcus pyogenes ABC020032186	1439072	PRJNA233007	233007	Terrabacteria group	Firmicutes	1.80326	38.5	-	JJIR01	9	1827	1695	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567356	GCA_000631525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/525/GCA_000631525.1_Stre_pyog_ABC020032186_V1	-	ABC020032186
Neisseria meningitidis 87255	1095700	PRJNA76331	76331	Proteobacteria	Betaproteobacteria	2.15821	51.7	-	ANQZ01	21	2515	2148	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055194	GCA_000327705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/705/GCA_000327705.2_ASM32770v2	-	87255
Helicobacter pylori GAMchJs106B	1159059	PRJNA89289	89289	Proteobacteria	delta/epsilon subdivisions	1.57677	39.4	-	APEI01	31	1554	1411	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436701	GCA_000345705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/705/GCA_000345705.2_ASM34570v2	-	GAMchJs106B
Streptococcus pneumoniae NorthCarolina6A-23	760887	PRJNA48967	48967	Terrabacteria group	Firmicutes	2.16337	39.7	-	AGQL01	16	2391	2067	10/25/11	3/9/17	Contig	Institute for Genome Sciences	SAMN00792698	GCA_000233325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/325/GCA_000233325.2_ASM23332v2	-	NorthCarolina6A-23
Campylobacter coli 15-537360	1358410	PRJNA211871	211871	Proteobacteria	delta/epsilon subdivisions	1.68502	31.3688	chromosome:NC_022660.1/CP006702.1; plasmid pCC42yr:NC_022656.1/CP006703.1	-	2	1724	1628	11/1/13	3/15/17	Complete Genome	Institute of Food Research	SAMN02603390	GCA_000494775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/775/GCA_000494775.1_ASM49477v1	24336384	15-537360
Mycobacterium tuberculosis PanR0606	1352578	PRJNA210055	210055	Terrabacteria group	Actinobacteria	4.40874	65.5498	chromosome:NZ_CM002119.1/CM002119.1	ATRX01	1	4264	4069	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471100	GCA_000445535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/535/GCA_000445535.1_fedora0606c_IS	23884993	PanR0606
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.5136	69	-	LNBR01	222	5313	4879	4/4/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04226739	GCA_001610095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/095/GCA_001610095.1_ASM161009v1	-	MAH-P-4023-08
Bacillus cereus VDM053	1053249	PRJNA70465	70465	Terrabacteria group	Firmicutes	6.1107	35.3	-	AHFR01	9	6535	6024	5/16/13	3/24/17	Scaffold	Broad Institute	SAMN02596881	GCA_000399465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/465/GCA_000399465.1_Baci_cere_VDM053_V1	-	VDM053
Staphylococcus epidermidis	1282	PRJNA278199	278199	Terrabacteria group	Firmicutes	2.54015	32.1	-	LDTG01	66	2526	2362	12/22/15	3/27/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401364	GCA_001476515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/515/GCA_001476515.1_ASM147651v1	26793183	SA6
Listeria monocytogenes Lm25180	1403329	PRJNA219697	219697	Terrabacteria group	Firmicutes	2.91619	37.8	-	JHZR01	10	2992	2902	4/8/14	2/26/17	Scaffold	DOE Joint Genome Institute	SAMN02743960	GCA_000620885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/885/GCA_000620885.1_ASM62088v1	-	Lm25180
Yersinia pestis PY-46	992151	PRJNA64329	64329	Proteobacteria	Gammaproteobacteria	4.67492	47.5	-	AKSK01	460	4564	4218	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141472	GCA_000269305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/305/GCA_000269305.1_ASM26930v1	-	PY-46
Campylobacter jejuni HB-CJGB-LXC	1316918	PRJNA196567	196567	Proteobacteria	delta/epsilon subdivisions	1.61026	30.5	-	ATBL01	9	1676	1575	1/15/16	3/20/17	Scaffold	"State Key Laboratory for Infectious Disease Prevention and Control, and National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China"	SAMN04412547	GCA_001516425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/425/GCA_001516425.1_ASM151642v1	-	HB-CJGB-LXC
Campylobacter coli RM5611	1183380	PRJNA162959	162959	Proteobacteria	delta/epsilon subdivisions	1.73317	31.3357	chromosome:NZ_CP007179.1/CP007179.1; plasmid pRM5611_48kb:NZ_CP007180.1/CP007180.1	-	2	1771	1645	3/3/14	3/15/17	Complete Genome	US Department of Agriculture	SAMN02743854	GCA_000583795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/795/GCA_000583795.1_ASM58379v1	-	RM5611
Campylobacter coli	195	PRJNA299429	299429	Proteobacteria	delta/epsilon subdivisions	1.70785	31.3329	chromosome:NZ_CP013034.1/CP013034.1; plasmid unnamed:NZ_CP013035.1/CP013035.1	-	2	1758	1647	10/28/15	3/18/17	Complete Genome	University of Tulsa	SAMN04202590	GCA_001417635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/635/GCA_001417635.1_ASM141763v1	-	HC2-48
Campylobacter coli	195	PRJNA350584	350584	Proteobacteria	delta/epsilon subdivisions	1.75048	31.3094	chromosome:NZ_CP017871.1/CP017871.1; plasmid pCCDM183:NZ_CP017872.1/CP017872.1	-	2	1839	1723	11/3/16	3/20/17	Complete Genome	University of Tulsa	SAMN05942184	GCA_001865495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/495/GCA_001865495.1_ASM186549v1	-	BP3183
Campylobacter coli	195	PRJNA350584	350584	Proteobacteria	delta/epsilon subdivisions	1.73565	31.3082	chromosome:NZ_CP017868.1/CP017868.1; plasmid pCCDM116L:NZ_CP017869.1/CP017869.1; plasmid pCCDM116S:NZ_CP017870.1/CP017870.1	-	3	1828	1712	11/3/16	3/20/17	Complete Genome	University of Tulsa	SAMN05942182	GCA_001865475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/475/GCA_001865475.1_ASM186547v1	-	MG1116
Campylobacter jejuni HB-CJGB-XWM	1316914	PRJNA196570	196570	Proteobacteria	delta/epsilon subdivisions	1.67189	30.4	-	ATBN01	8	1751	1623	1/15/16	3/20/17	Scaffold	"State Key Laboratory for Infectious Disease Prevention and Control, and National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China"	SAMN04412549	GCA_001516435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/435/GCA_001516435.1_ASM151643v1	-	HB-CJGB-XWM
Yersinia pestis PY-47	992152	PRJNA64331	64331	Proteobacteria	Gammaproteobacteria	4.68289	47.5	-	AKSL01	534	4593	4225	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141473	GCA_000269325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/325/GCA_000269325.1_ASM26932v1	-	PY-47
Listeria monocytogenes Lm21045	1403330	PRJNA219698	219698	Terrabacteria group	Firmicutes	2.96416	37.8	-	JHZQ01	12	3031	2942	4/8/14	2/26/17	Scaffold	DOE Joint Genome Institute	SAMN02743963	GCA_000620905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/620/905/GCA_000620905.1_ASM62090v1	-	Lm21045
Staphylococcus epidermidis	1282	PRJNA278200	278200	Terrabacteria group	Firmicutes	2.55878	32.2	-	LDTJ01	96	2549	2372	12/22/15	3/27/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401365	GCA_001476525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/525/GCA_001476525.1_ASM147652v1	26793183	SB7c
Bacillus cereus VD136	1053234	PRJNA70435	70435	Terrabacteria group	Firmicutes	5.26609	35.7	-	AHFC01	23	5528	5068	5/16/13	3/24/17	Scaffold	Broad Institute	SAMN02596866	GCA_000399485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/485/GCA_000399485.1_Baci_cere_VD136_V1	-	VD136
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.18089	69.1	-	LNBQ01	195	4957	4600	4/4/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04226738	GCA_001610105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/105/GCA_001610105.1_ASM161010v1	-	MAH-P-3449-08
Mycobacterium tuberculosis PanR0607	1352579	PRJNA210056	210056	Terrabacteria group	Actinobacteria	4.4052	65.5498	chromosome:NZ_CM002114.1/CM002114.1	ATRY01	1	4273	4076	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471061	GCA_000445555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/555/GCA_000445555.1_fedora0607c_IS	23884993	PanR0607
Campylobacter coli	195	PRJNA350584	350584	Proteobacteria	delta/epsilon subdivisions	1.76711	31.3032	chromosome:NZ_CP017878.1/CP017878.1; plasmid pCCDM108L:NZ_CP017879.1/CP017879.1; plasmid pCCDM108S:NZ_CP017880.1/CP017880.1	-	3	1875	1777	11/3/16	3/20/17	Complete Genome	University of Tulsa	SAMN05942181	GCA_001865555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/555/GCA_001865555.1_ASM186555v1	-	BG2108
Streptococcus pneumoniae GA02254	760742	PRJNA48405	48405	Terrabacteria group	Firmicutes	2.17245	39.8	-	AIKI01	14	2376	2056	3/7/12	3/8/17	Contig	Institute for Genome Sciences	SAMN02471184	GCA_000251225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/225/GCA_000251225.2_ASM25122v2	-	GA02254
Helicobacter pylori HP116Bi	1159065	PRJNA89301	89301	Proteobacteria	delta/epsilon subdivisions	1.64742	39.2	-	APEN01	50	1626	1465	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436844	GCA_000345725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/725/GCA_000345725.2_ASM34572v2	-	HP116Bi
Neisseria meningitidis 2007056	1095669	PRJNA76269	76269	Proteobacteria	Betaproteobacteria	2.19868	51.8	-	ANSE01	19	2539	2173	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055147	GCA_000327725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/725/GCA_000327725.2_ASM32772v2	-	2007056
Streptococcus pyogenes ABC020033233	1439077	PRJNA233006	233006	Terrabacteria group	Firmicutes	1.82155	38.4	-	JJIS01	6	1852	1736	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567355	GCA_000631545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/545/GCA_000631545.1_Stre_pyog_ABC020033233_V1	-	ABC020033233
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.74869	35	-	JQQP01	292	4311	3900	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949524	GCA_001568225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/225/GCA_001568225.1_ASM156822v1	26833181	56605
Bacillus anthracis str. 95014	1437442	PRJNA231913	231913	Terrabacteria group	Firmicutes	5.3368	35.2047	plasmid pXO1_95014:JANG01000027.1	JANG01	27	5754	5070	3/4/14	8/5/14	Contig	Army Medical and Veterinary Research Center	SAMN02951914	GCA_000585275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/275/GCA_000585275.1_95014_de_novo_assembly	-	95014
Shigella flexneri 2a	42897	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.71937	50.3	-	CELV01	327	5450	4469	3/21/15	3/5/17	Scaffold	SC	SAMEA3107687	GCA_001078805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/805/GCA_001078805.1_14928_1_79	26021915	24570
Pseudomonas aeruginosa BL09	1402550	PRJNA219912	219912	Proteobacteria	Gammaproteobacteria	6.9323	65.9	-	AXPR01	11	6562	6353	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360722	GCA_000480965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/965/GCA_000480965.1_Pseu_aeru_BL09_V1	-	BL09
Acinetobacter baumannii	470	PRJNA321752	321752	Proteobacteria	Gammaproteobacteria	4.11665	39.3	-	LXWY01	234	3973	3822	8/5/16	3/20/17	Scaffold	University of Colorado - Boulder	SAMN05003718	GCA_001700395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/395/GCA_001700395.1_ASM170039v1	-	CU060707
Streptococcus agalactiae BSU108	1154833	PRJNA86325	86325	Terrabacteria group	Firmicutes	2.09872	35.4	-	ALRK01	24	2172	2046	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991130	GCA_000290015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/015/GCA_000290015.1_ASM29001v1	-	BSU108
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.26726	41.2	-	CEDG01	127	2212	2107	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233886	GCA_000938955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/955/GCA_000938955.1_Velvet_assembly	-	LS0L
Pseudomonas syringae	317	PRJNA387592	387592	Proteobacteria	Gammaproteobacteria	5.90538	59.3	-	NHSY01	160	5350	5047	9/20/17	9/22/17	Contig	Max Planck Institute 	SAMN07158954	GCA_002318735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/735/GCA_002318735.1_ASM231873v1	28880925	Knox652c
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.4064	38.2	-	FJCD01	20	3119	2986	2/20/16	3/27/17	Contig	SC	SAMEA2059994	GCA_900050215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/215/GCA_900050215.1_10771_1_59	-	2531STDY5467340
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.54436	50.8	-	FTVQ01	382	5107	4327	1/28/17	2/26/17	Contig	SC	SAMEA2054635	GCA_900158435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/435/GCA_900158435.1_9803_4_41	-	2090STDY5461859
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.39054	67.1	-	MUTD01	94	7966	7618	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001903	GCA_001993455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/455/GCA_001993455.1_ASM199345v1	-	VC9855
Burkholderia pseudomallei MSHR3335	1437002	PRJNA231854	231854	Proteobacteria	Betaproteobacteria	7.26271	68.1	-	JRFL01	2	7499	6916	11/11/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN03015286	GCA_000775035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/035/GCA_000775035.1_BPU	25676747	MSHR3335
Bacillus thuringiensis serovar aizawai	1433	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.69337	34.9	-	NFDU01	262	7182	6658	5/17/17	6/15/17	Scaffold	Huazhong Agricultural University	SAMN05934545	GCA_002147165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/165/GCA_002147165.1_ASM214716v1	-	BGSC 4J1
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.02656	47.5	-	JSTV01	113	3823	3661	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104864	GCA_000788995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/995/GCA_000788995.1_ASM78899v1	25538191	2012HC-21
Clostridioides difficile P6	1151397	PRJNA85969	85969	Terrabacteria group	Firmicutes	4.16711	28.5	-	AVLP01	167	3941	3700	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766720	GCA_000450625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/625/GCA_000450625.2_ASM45062v2	-	P6
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.83836	32.4	-	MRKA01	99	1939	1550	4/19/17	4/22/17	Scaffold	FOI Swedish Defence Research Agency	SAMN03773902	GCA_002100605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/605/GCA_002100605.1_ASM210060v1	28348839	FDC430
Brucella abortus 01-0065	1328357	PRJNA200941	200941	Proteobacteria	Alphaproteobacteria	3.28674	57.2	-	ATGO01	4	3384	3161	6/21/13	3/24/17	Contig	Broad Institute	SAMN02092520	GCA_000413795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/795/GCA_000413795.1_Bruc_abor_biovar_1_01-0065_V1	-	01-0065
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.00241	38.1	-	MLOE01	366	2084	1792	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297096	GCA_001869505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/505/GCA_001869505.1_ASM186950v1	27118061	AWRIB583
Vibrio parahaemolyticus S115	1394650	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.1441	45.2	-	AWJK01	854	4938	4638	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338964	GCA_000490135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/135/GCA_000490135.1_S115	-	S115
Bacillus subtilis	1423	PRJNA243599	243599	Terrabacteria group	Firmicutes	4.04312	43.9	-	JMNA01	1	4107	3987	8/22/14	10/21/14	Scaffold	Los Alamos National Laboratory	SAMN02740813	GCA_000743215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/215/GCA_000743215.1_BST	25301645	BST
Klebsiella pneumoniae BIDMC 41	1328427	PRJNA202053	202053	Proteobacteria	Gammaproteobacteria	5.70245	56.9	-	AYHR01	10	5720	5410	10/30/13	2/21/17	Scaffold	Broad Institute	SAMN02138672	GCA_000492195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/195/GCA_000492195.1_Kleb_pneu_BIDMC_41_V1	-	BIDMC 41
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	4.29698	27.9	-	LFQD01	51	4204	3996	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779978	GCA_001574315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/315/GCA_001574315.1_ASM157431v1	26939550	SU0994
Enterococcus faecalis EnGen0362	1169287	PRJNA157743	157743	Terrabacteria group	Firmicutes	3.00451	37.2	-	ASDB01	15	3047	2899	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847603	GCA_000392895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/895/GCA_000392895.1_Ente_faec_T12_V1	-	T12
Streptococcus mutans B082SM-A	1225198	PRJNA173259	173259	Terrabacteria group	Firmicutes	2.12675	37	-	ALYZ01	53	2114	1975	1/24/14	3/24/17	Contig	New York University College of Dentistry	SAMN02641545	GCA_000522785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/785/GCA_000522785.1_out_k29_n4_samp14-contigs.fa	24291226	B082SM-A
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14406	52.4	-	CQHL01	65	2509	2200	3/22/15	4/11/17	Contig	SC	SAMEA1690488	GCA_001144945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/945/GCA_001144945.1_8727_8_36	-	GCGS132
Enterococcus faecium EnGen0140	1157435	PRJNA88299	88299	Terrabacteria group	Firmicutes	2.65569	38.2	-	AITE01	6	2702	2475	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808964	GCA_000392045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/045/GCA_000392045.1_Ente_faec_9830512-2_V1	-	9830512-2
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.17401	41.1	-	CWAC01	87	2133	1952	6/23/15	3/26/17	Contig	SC	SAMEA1032948	GCA_001178105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/105/GCA_001178105.1_6903_2_1	-	EQUI0050
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.80237	65.8	-	DCOD01	389	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452373	GCA_002322235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/235/GCA_002322235.1_ASM232223v1	28894102	-
Campylobacter coli	195	PRJNA350584	350584	Proteobacteria	delta/epsilon subdivisions	1.75871	31.3027	chromosome:NZ_CP017865.1/CP017865.1; plasmid pCCDM105L:NZ_CP017866.1/CP017866.1; plasmid pCCDM105S:NZ_CP017867.1/CP017867.1	-	3	1862	1760	11/3/16	3/20/17	Complete Genome	University of Tulsa	SAMN05942180	GCA_001865455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/455/GCA_001865455.1_ASM186545v1	-	YF2105
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.44864	53.5	-	LSXU01	50	2359	2182	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497001	GCA_002203815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/815/GCA_002203815.1_S108	-	4601
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.67484	47.1	-	CVJV01	40	4382	4176	4/2/15	4/10/17	Scaffold	SC	SAMEA980134	GCA_001319345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/345/GCA_001319345.1_4976_6_5	-	ERL061915
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.99231	60	-	FCML01	17	4699	4541	1/21/16	3/27/17	Scaffold	SC	SAMEA2274002	GCA_001537305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/305/GCA_001537305.1_12082_5_41	-	2880STDY5682930
Lactobacillus plantarum	1590	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.32108	44.3	-	MKDF01	72	3268	3066	2/1/17	3/29/17	Contig	ETH Zurich	SAMN05717728	GCA_001981785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/785/GCA_001981785.1_ASM198178v1	-	RI-405
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.74104	31.3	-	LBDP01	88	1790	1694	10/27/15	3/18/17	Contig	FDA	SAMN03344575	GCA_001417415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/415/GCA_001417415.1_ASM141741v1	-	CVM N50039F
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.53801	32.6	-	CUFV01	72	2512	2388	3/31/15	3/26/17	Scaffold	SC	SAMEA1035113	GCA_001239725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/725/GCA_001239725.1_7068_7_3	-	7589
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.90423	55.2	-	JZCZ01	206	4891	4572	3/20/15	3/25/17	Scaffold	University of Minnesota	SAMN03333176	GCA_000958765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/765/GCA_000958765.1_ASM95876v1	26438492	MNCRE56
Cronobacter sakazakii	28141	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.75069	57.2	-	DBEF01	52	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453153	GCA_002294395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/294/395/GCA_002294395.1_ASM229439v1	28894102	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.2123	64.1	-	FVBE01	14	5328	5153	3/10/17	3/18/17	Contig	SC	SAMEA2068665	GCA_900130835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/835/GCA_900130835.1_10665_3_34	-	204
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.98209	62.7	-	DGGH01	110	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452817	GCA_002392095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/095/GCA_002392095.1_ASM239209v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.57744	67.1	-	LPFJ01	166	6853	6432	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449483	GCA_001530375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/375/GCA_001530375.1_ASM153037v1	-	MSMB1473WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.08367	55.2	-	LPQJ01	92	5086	4831	12/21/15	3/27/17	Contig	JCVI	SAMN04252899	GCA_001472115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/115/GCA_001472115.1_SMART_312.v1	-	SMART_312
Pseudomonas sp. SHC52	984195	PRJEB1710	248795	Proteobacteria	Gammaproteobacteria	6.31259	61	-	CBLV01	384	5685	5328	5/29/14	4/17/17	Contig	WUR	SAMEA3158461	GCA_000801235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/235/GCA_000801235.1_V1	-	SHC52
Streptomyces sp. NRRL S-1448	1463883	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.96023	71.6	-	JOGE01	294	7900	7413	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645447	GCA_000719365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/365/GCA_000719365.1_ASM71936v1	-	NRRL S-1448
Bacillus sp. OG2	1979526	PRJNA375758	375758	Terrabacteria group	Firmicutes	5.20612	45.3	-	NDFN01	675	5139	4963	8/1/17	8/21/17	Contig	SysMilk	SAMN06718479	GCA_002238145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/145/GCA_002238145.1_ASM223814v1	-	OG2
Acinetobacter sp. SFA	1805633	PRJNA312759	312759	Proteobacteria	Gammaproteobacteria	3.14045	43.1	-	LSZI01	22	2974	2826	5/19/16	4/6/17	Scaffold	University of aberdeen	SAMN04505917	GCA_001647535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/535/GCA_001647535.1_ASM164753v1	-	SFA
Clostridium sp. Maddingley MBC34-26	1196322	PRJNA167830	167830	Terrabacteria group	Firmicutes	6.19727	29.8	-	ALXI01	184	5832	5778	11/2/12	9/26/13	Contig	CSIRO	SAMN01813472	GCA_000309845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/845/GCA_000309845.1_Csp_Mad1.0	23405323	-
Staphylococcus sp. HMSC36A02	1608865	PRJNA274517	274517	Terrabacteria group	Firmicutes	2.40235	32.5	-	LTMU01	90	2358	2228	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498866	GCA_001838815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/815/GCA_001838815.1_ASM183881v1	-	HMSC36A02
Mycobacterium sp. 27335	1908205	PRJNA347845	347845	Terrabacteria group	Actinobacteria	6.34449	66.2	-	MLCL01	93	6156	5927	1/11/17	4/16/17	Contig	University of Georgia	SAMN05897976	GCA_001942625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/625/GCA_001942625.1_ASM194262v1	-	27335
Mycobacterium sp. NS-7484	1834161	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.56016	66.6	-	MBEJ01	143	5318	5093	1/18/17	4/17/17	Contig	JCVI	SAMN04634271	GCA_001953975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/975/GCA_001953975.1_ASM195397v1	-	NS-7484
Staphylococcus sp. HMSC36A10	1608866	PRJNA274518	274518	Terrabacteria group	Firmicutes	2.73603	32.7	-	LTMT01	73	2864	2716	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498867	GCA_001838845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/845/GCA_001838845.1_ASM183884v1	-	HMSC36A10
Clostridium sp. VE202-10	1232450	PRJDB529	219219	Terrabacteria group	Firmicutes	6.06722	49.4	-	BAHX01	115	-	-	9/14/13	10/31/15	Contig	The University of Tokyo	SAMD00004205	GCA_000471785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/785/GCA_000471785.1_ASM47178v1	-	VE202-10
Acinetobacter sp. SFB	1805634	PRJNA312758	312758	Proteobacteria	Gammaproteobacteria	3.30772	40.3	-	LSZH01	18	3165	2946	5/19/16	4/6/17	Scaffold	University of aberdeen	SAMN04505912	GCA_001647545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/545/GCA_001647545.1_ASM164754v1	-	SFB
Bacillus sp. SA5d-4	1904753	PRJNA396628	396628	Terrabacteria group	Firmicutes	3.02838	35	-	NPIA01	23	3185	3050	8/22/17	8/24/17	Contig	"Third Institute of Oceanography, SOA"	SAMN07430085	GCA_002262935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/935/GCA_002262935.1_ASM226293v1	-	SA5d-4
Streptomyces sp. NRRL B-5680	1463838	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.02218	72.9	-	JOGG01	182	7147	6739	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645449	GCA_000719415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/415/GCA_000719415.1_ASM71941v1	-	NRRL B-5680
Pseudomonas sp. PI1	1582493	PRJNA270003	270003	Proteobacteria	Gammaproteobacteria	7.16417	66.7	-	JWMC01	105	6486	6273	12/31/14	4/10/17	Contig	Dalian University of Technology	SAMN03262487	GCA_000812405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/405/GCA_000812405.1_ASM81240v1	26067966	PI1
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.15295	55	-	LPQG01	80	5131	4892	12/21/15	3/27/17	Contig	JCVI	SAMN04252902	GCA_001472175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/175/GCA_001472175.1_SMART_389.v1	-	SMART_389
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.1902	67.5	-	LPFZ01	109	6460	6124	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449499	GCA_001530445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/445/GCA_001530445.1_ASM153044v1	-	MSMB1517WGS
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.5861	63	-	DGGK01	29	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452812	GCA_002392165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/165/GCA_002392165.1_ASM239216v1	28894102	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.27513	64.2	-	FRZB01	28	5282	5136	12/14/16	3/21/17	Contig	SC	SAMEA2071292	GCA_900130845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/845/GCA_900130845.1_10665_3_35	-	205
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.96446	55.1	-	JZDA01	142	4984	4697	3/20/15	3/25/17	Scaffold	University of Minnesota	SAMN03333177	GCA_000958805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/805/GCA_000958805.1_ASM95880v1	26438492	MNCRE55
Staphylococcus haemolyticus	1283	PRJNA356358	356358	Terrabacteria group	Firmicutes	2.48452	32.6	-	MRUZ01	65	2423	2287	1/23/17	3/28/17	Scaffold	Northwest A&F University	SAMN06112366	GCA_001969865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/865/GCA_001969865.1_ASM196986v1	-	BC05211
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.71308	31.4	-	LBDM01	23	1767	1676	10/27/15	3/18/17	Contig	FDA	SAMN03344578	GCA_001417445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/445/GCA_001417445.1_ASM141744v1	-	CVM N51201F
Lactobacillus plantarum	1590	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.32696	44.3	-	MKDK01	55	3272	3079	2/1/17	3/29/17	Contig	ETH Zurich	SAMN05717734	GCA_001981875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/875/GCA_001981875.1_ASM198187v1	-	RI-422
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.20369	60	-	FCHA01	23	4912	4765	1/21/16	3/27/17	Scaffold	SC	SAMEA2273918	GCA_001537325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/325/GCA_001537325.1_12082_2_53	-	2880STDY5682845
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.46407	46.9	-	CGHW01	104	4220	3948	3/15/15	3/26/17	Scaffold	SC	SAMEA980176	GCA_001319365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/365/GCA_001319365.1_5103_7_6	-	ERL084574
Corynebacterium diphtheriae bv. belfanti	2014537	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.39338	53.6	-	LSXV01	55	2309	2114	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497006	GCA_002203825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/825/GCA_002203825.1_S109	-	4663
Candidatus Izimaplasma sp. HR1	1541959	PRJNA259530	259530	Terrabacteria group	Tenericutes	1.87874	31.3	chromosome:NZ_CP009415.1/CP009415.1	-	1	1849	1800	9/18/14	9/21/17	Complete Genome	California Institute of Technology	SAMN03009086	GCA_000755705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/705/GCA_000755705.1_ASM75570v1	27058507	HR1
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.53152	67.1	-	DCNG01	142	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451975	GCA_002322615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/615/GCA_002322615.1_ASM232261v1	28894102	-
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.10228	41.3	-	CWDA01	78	2047	1864	6/23/15	3/26/17	Contig	SC	SAMEA1032949	GCA_001178125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/125/GCA_001178125.1_6903_6_22	-	EQUI0167
Enterococcus faecium EnGen0142	1157437	PRJNA88303	88303	Terrabacteria group	Firmicutes	2.61272	38.3	-	AITG01	7	2659	2421	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808966	GCA_000392065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/065/GCA_000392065.1_Ente_faec_9830565-4_V1	-	9830565-4
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14517	52.4	-	CQIB01	74	2531	2197	3/22/15	4/11/17	Contig	SC	SAMEA1690355	GCA_001146225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/225/GCA_001146225.1_8727_8_79	-	GCGS175
Streptococcus mutans B06Sm2	1225199	PRJNA173260	173260	Terrabacteria group	Firmicutes	2.21455	36.9	-	ALZA01	65	2209	2045	1/24/14	3/27/17	Contig	New York University College of Dentistry	SAMN02641546	GCA_000522805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/805/GCA_000522805.2_out_k29_n4_samp15-contigs.fa	24291226	B06Sm2
Enterococcus faecalis EnGen0348	1169288	PRJNA157745	157745	Terrabacteria group	Firmicutes	3.09011	37.4	-	ASDC01	15	3200	3005	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847604	GCA_000392915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/915/GCA_000392915.1_Ente_faec_D3_V1	-	D3
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.88285	28	-	LFQE01	43	3726	3511	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779979	GCA_001574335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/335/GCA_001574335.1_ASM157433v1	26939550	SU0634
Klebsiella pneumoniae BIDMC 40	1328426	PRJNA202052	202052	Proteobacteria	Gammaproteobacteria	5.5546	57.1	-	AYHS01	12	5553	5225	10/30/13	2/21/17	Scaffold	Broad Institute	SAMN02138671	GCA_000492215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/215/GCA_000492215.1_Kleb_pneu_BIDMC_40_V1	-	BIDMC 40
Bacillus subtilis B7-s	1433293	PRJNA230659	230659	Terrabacteria group	Firmicutes	5.31392	35.1	-	AZNI01	82	-	-	1/16/14	2/27/14	Contig	Gansu Institute of Business and Technology	SAMN02597362	GCA_000520915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/915/GCA_000520915.1_denovo	24526629	B7-s
Vibrio parahaemolyticus S114	1394649	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.20743	45.1	-	AWJL01	698	4927	4700	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338963	GCA_000490155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/155/GCA_000490155.1_S114	-	S114
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.00041	38	-	MLNX01	327	2060	1819	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297089	GCA_001869525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/525/GCA_001869525.1_ASM186952v1	27118061	AWRIB503
Brucella abortus B10-0018	1328358	PRJNA200942	200942	Proteobacteria	Alphaproteobacteria	3.28668	57.2	-	ATGN01	4	3383	3165	6/21/13	3/24/17	Contig	Broad Institute	SAMN02092521	GCA_000413815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/815/GCA_000413815.1_Bruc_abor_biovar_1_B10-0018_V1	-	B10-0018
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.78401	32.2	-	MRKE01	108	1846	1549	4/19/17	4/22/17	Scaffold	FOI Swedish Defence Research Agency	SAMN03773898	GCA_002100765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/765/GCA_002100765.1_ASM210076v1	28348839	FDC426
Clostridioides difficile P21	1151406	PRJNA85987	85987	Terrabacteria group	Firmicutes	4.09054	28.5	-	AVLY01	53	3816	3606	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766696	GCA_000450645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/645/GCA_000450645.2_ASM45064v2	-	P21
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.01552	47.5	-	JSTW01	115	3823	3634	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104865	GCA_000789015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/015/GCA_000789015.1_ASM78901v1	25538191	2012HC-22
Bacillus thuringiensis serovar aizawai	1433	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.70729	34.8	-	NFDY01	183	7037	6495	5/17/17	6/15/17	Scaffold	Huazhong Agricultural University	SAMN05934549	GCA_002147255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/255/GCA_002147255.1_ASM214725v1	-	BGSC 4J5
Burkholderia pseudomallei MSHR2138	1435993	PRJNA231527	231527	Proteobacteria	Betaproteobacteria	7.58363	67.8	-	JRFM01	51	7862	7138	11/11/14	4/10/17	Scaffold	Los Alamos National Laboratory	SAMN03018310	GCA_000775045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/045/GCA_000775045.1_BPL	25676747	MSHR2138
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.48692	66.5	-	MUTH01	111	8055	7668	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001907	GCA_001993475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/475/GCA_001993475.1_ASM199347v1	-	VC13112
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.70709	50.5	-	FTVR01	416	5295	4472	1/28/17	2/26/17	Contig	SC	SAMEA2054636	GCA_900158445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/445/GCA_900158445.1_9803_4_42	-	2090STDY5461860
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.48752	38.4	-	FJEH01	22	3188	3053	2/20/16	3/27/17	Contig	SC	SAMEA2065721	GCA_900050225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/225/GCA_900050225.1_10771_3_60	-	2531STDY5467437
Pseudomonas syringae	317	PRJNA387592	387592	Proteobacteria	Gammaproteobacteria	5.94636	59.3	-	NHSZ01	554	5669	5139	9/20/17	9/22/17	Contig	Max Planck Institute 	SAMN07158953	GCA_002318795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/795/GCA_002318795.1_ASM231879v1	28880925	Knox623a
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03783	41.2	-	CEJI01	72	2022	1919	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234025	GCA_000939015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/015/GCA_000939015.1_Velvet_assembly	-	S16D
Streptococcus agalactiae GB00084	1154899	PRJNA86471	86471	Terrabacteria group	Firmicutes	2.03806	35.3	-	ALST01	20	2106	1990	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991157	GCA_000290035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/035/GCA_000290035.1_ASM29003v1	-	GB00084
Acinetobacter baumannii	470	PRJNA321752	321752	Proteobacteria	Gammaproteobacteria	4.1811	39.2	-	LXYW01	318	4032	3819	8/5/16	3/21/17	Scaffold	University of Colorado - Boulder	SAMN05005381	GCA_001700445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/445/GCA_001700445.1_ASM170044v1	-	CU032113
Pseudomonas aeruginosa BL08	1402549	PRJNA219911	219911	Proteobacteria	Gammaproteobacteria	6.97678	65.9	-	AXPS01	9	6692	6499	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360721	GCA_000480985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/985/GCA_000480985.1_Pseu_aeru_BL08_V1	-	BL08
Shigella flexneri	623	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.25291	50.7	-	MSJX02	269	4587	4052	1/4/17	3/4/17	Scaffold	University of California at Davis	SAMN03358411	GCA_001933055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/933/055/GCA_001933055.2_ASM193305v2	-	BCW_4874
Bacillus anthracis	1392	PRJNA289051	289051	Terrabacteria group	Firmicutes	5.35674	34.9152	plasmid pXO1:CM003469.1	LGCD01	45	5718	4120	9/2/15	11/24/15	Contig	Agricultural Research Council	SAMN03840820	GCA_001278435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/435/GCA_001278435.1_ASM127843v1	26586878	3631_1C
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.73268	35	-	JQQQ01	331	4306	3862	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949526	GCA_001568265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/265/GCA_001568265.1_ASM156826v1	26833181	56606
Streptococcus pyogenes ABC020029706	1439055	PRJNA233005	233005	Terrabacteria group	Firmicutes	1.76267	38.6	-	JJIT01	3	1762	1629	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567354	GCA_000631565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/565/GCA_000631565.1_Stre_pyog_ABC020029706_V1	-	ABC020029706
Neisseria meningitidis 69096	1095672	PRJNA76275	76275	Proteobacteria	Betaproteobacteria	2.24935	51.6	-	ANSB01	31	2633	2208	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055150	GCA_000327745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/745/GCA_000327745.2_ASM32774v2	-	69096
Helicobacter pylori HP250AFii	1159066	PRJNA89303	89303	Proteobacteria	delta/epsilon subdivisions	1.57967	39.4	-	APEO01	45	1562	1408	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436791	GCA_000345745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/745/GCA_000345745.2_ASM34574v2	-	HP250AFii
Streptococcus pneumoniae GA02270	760743	PRJNA48407	48407	Terrabacteria group	Firmicutes	2.16632	39.7	-	AIKJ01	17	2392	2077	3/7/12	3/8/17	Contig	Institute for Genome Sciences	SAMN00690873	GCA_000251245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/245/GCA_000251245.2_ASM25124v2	-	GA02270
Acholeplasma oculi	35623	PRJEB6255	247756	Terrabacteria group	Tenericutes	1.58712	31.3	chromosome 1:NZ_LK028559.1/LK028559.1	-	1	1501	1436	6/2/14	4/10/17	Complete Genome	MPIMG	SAMEA2522063	GCA_000953195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/195/GCA_000953195.1_Acholeplasma_oculi_strain_19L	-	-
Mycobacterium tuberculosis PanR0609	1352580	PRJNA210057	210057	Terrabacteria group	Actinobacteria	4.40594	65.4996	chromosome:NZ_CM002116.1/CM002116.1	ATRZ01	1	4282	4077	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471052	GCA_000445575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/575/GCA_000445575.1_fedora0609c_IS	23884993	PanR0609
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.11453	69.2	-	LNBT01	155	4893	4581	4/4/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04226741	GCA_001610135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/135/GCA_001610135.1_ASM161013v1	-	MAH-P-7673-04
Bacillus cereus ISP2954	1053215	PRJNA70397	70397	Terrabacteria group	Firmicutes	6.74644	35	-	AHEJ01	51	7124	6608	5/16/13	3/24/17	Scaffold	Broad Institute	SAMN02596847	GCA_000399505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/505/GCA_000399505.1_Baci_cere_ISP2954_V1	-	ISP2954
Staphylococcus epidermidis	1282	PRJNA278188	278188	Terrabacteria group	Firmicutes	2.50456	31.9	-	LDTH01	181	2484	2327	12/22/15	3/27/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401352	GCA_001476925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/476/925/GCA_001476925.1_ASM147692v1	26793183	SA8
Listeria monocytogenes FSL F6-684	1273540	PRJNA244568	244568	Terrabacteria group	Firmicutes	2.8521	38	-	JOOX01	1	2891	2775	8/25/14	2/26/17	Scaffold	Los Alamos National Laboratory	SAMN02870153	GCA_000743465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/465/GCA_000743465.1_LMD	25258271	FSL F6-684
Yersinia pestis PY-52	992154	PRJNA64335	64335	Proteobacteria	Gammaproteobacteria	4.68916	47.5	-	AKSN01	699	4588	4224	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141475	GCA_000269345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/345/GCA_000269345.1_ASM26934v1	-	PY-52
Campylobacter jejuni BJ-CJGB96G25	1316922	PRJNA196537	196537	Proteobacteria	delta/epsilon subdivisions	1.61837	30.6	-	ASXL01	9	1679	1582	1/15/16	3/20/17	Scaffold	"State Key Laboratory for Infectious Disease Prevention and Control, and National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China."	SAMN04412552	GCA_001516485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/485/GCA_001516485.1_ASM151648v1	-	BJ-CJGB96G25
Methanococcus vannielii SB	406327	PRJNA17889	17889	Euryarchaeota	Methanococci	1.72005	31.3	chromosome:NC_009634.1/CP000742.1	-	1	1754	1679	6/29/07	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598403	GCA_000017165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/165/GCA_000017165.1_ASM1716v1	-	SB
Prochlorococcus marinus str. MIT 9301	167546	PRJNA15746	15746	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.64188	31.3	chromosome:NC_009091.1/CP000576.1	-	1	1837	1786	3/5/07	3/30/17	Complete Genome	Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02603288	GCA_000015965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/965/GCA_000015965.1_ASM1596v1	18159947	MIT 9301
Prochlorococcus marinus str. AS9601	146891	PRJNA13548	13548	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.66989	31.3	chromosome:NC_008816.1/CP000551.1	-	1	1842	1784	1/19/07	3/30/17	Complete Genome	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02603921	GCA_000015645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/645/GCA_000015645.1_ASM1564v1	18159947	AS9601
Campylobacter coli	195	PRJNA350584	350584	Proteobacteria	delta/epsilon subdivisions	1.86661	31.2732	chromosome:NZ_CP017873.1/CP017873.1; plasmid pCCDM33S:NZ_CP017874.1/CP017874.1	-	2	1947	1845	11/3/16	3/20/17	Complete Genome	University of Tulsa	SAMN05942178	GCA_001865515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/515/GCA_001865515.1_ASM186551v1	-	WA333
Campylobacter jejuni BJ-CJGB95377	1316924	PRJNA196470	196470	Proteobacteria	delta/epsilon subdivisions	1.6137	30.6	-	ASXK01	11	1674	1579	1/15/16	3/20/17	Scaffold	"State Key Laboratory for Infectious Disease Prevention and Control, and National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China."	SAMN04412551	GCA_001516495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/495/GCA_001516495.1_ASM151649v1	-	BJ-CJGB95377
Yersinia pestis PY-61	992162	PRJNA64351	64351	Proteobacteria	Gammaproteobacteria	4.73527	47.6	-	AKSV01	510	4607	4265	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141483	GCA_000269365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/365/GCA_000269365.1_ASM26936v1	-	PY-61
Listeria monocytogenes LM201	1417986	PRJNA226606	226606	Terrabacteria group	Firmicutes	3.21853	37.5	-	AYPT01	66	3249	3164	12/18/14	2/27/17	Scaffold	Huazhong Agricultural University	SAMN03267130	GCA_000804465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/465/GCA_000804465.1_LM201_assembly	25657267	LM201
Staphylococcus epidermidis	1282	PRJNA278190	278190	Terrabacteria group	Firmicutes	2.507	31.9	-	LDTI01	148	2485	2320	12/22/15	3/27/17	Contig	"Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India"	SAMN03401354	GCA_001477325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/325/GCA_001477325.1_ASM147732v1	26793183	SB7b
Bacillus cereus VD118	1053231	PRJNA70429	70429	Terrabacteria group	Firmicutes	5.78295	35.5	-	AHEZ01	10	5965	5468	5/16/13	4/10/17	Scaffold	Broad Institute	SAMN02596863	GCA_000399525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/525/GCA_000399525.1_Baci_cere_VD118_V1	-	VD118
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.15233	69.2	-	LNAW01	168	4984	4594	4/4/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04229396	GCA_001610165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/165/GCA_001610165.1_ASM161016v1	-	MAH-P-11082-03
Mycobacterium tuberculosis PanR0610	1352581	PRJNA210058	210058	Terrabacteria group	Actinobacteria	4.40249	65.4996	chromosome:NZ_CM002118.1/CM002118.1	ATSA01	1	4295	4082	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471076	GCA_000445595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/595/GCA_000445595.1_fedora0610c_IS	23884993	PanR0610
Methanocaldococcus jannaschii DSM 2661	243232	PRJNA102	102	Euryarchaeota	Methanococci	1.73993	31.2688	chromosome:NC_000909.1/L77117.1; plasmid pDSM2661_1:NC_001732.1/L77118.1; plasmid pDSM2661_2:NC_001733.1/L77119.1	-	3	1866	1762	1/30/98	4/17/17	Complete Genome	TIGR	SAMN02603984	GCA_000091665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/091/665/GCA_000091665.1_ASM9166v1	8688087	DSM 2661
Streptococcus pneumoniae GA02714	760744	PRJNA48409	48409	Terrabacteria group	Firmicutes	2.19769	39.7	-	AIKK01	22	2448	2111	3/7/12	3/8/17	Contig	Institute for Genome Sciences	SAMN00632923	GCA_000251265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/265/GCA_000251265.2_ASM25126v2	-	GA02714
Helicobacter pylori HP250AFiii	1159067	PRJNA89305	89305	Proteobacteria	delta/epsilon subdivisions	1.5784	39.4	-	APEP01	50	1559	1414	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436778	GCA_000345765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/765/GCA_000345765.2_ASM34576v2	-	HP250AFiii
Neisseria meningitidis 61103	1095674	PRJNA76279	76279	Proteobacteria	Betaproteobacteria	2.19975	51.8	-	ANRZ01	27	2573	2152	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055153	GCA_000327765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/765/GCA_000327765.2_ASM32776v2	-	61103
Streptococcus pyogenes ABC020062601	1439310	PRJNA233004	233004	Terrabacteria group	Firmicutes	1.80119	38.5	-	JJIU01	6	1819	1697	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567353	GCA_000631585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/585/GCA_000631585.1_Stre_pyog_ABC020062601_V1	-	ABC020062601
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.62315	35	-	JQQR01	269	4166	3750	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949564	GCA_001568285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/285/GCA_001568285.1_ASM156828v1	26833181	56606-V
Bacillus anthracis	1392	PRJNA289201	289201	Terrabacteria group	Firmicutes	5.44163	34.8836	plasmid pXO1:CM003467.1; plasmid pXO2:CM003468.1	LGCC01	52	5784	3935	9/2/15	11/24/15	Contig	Agricultural Research Council	SAMN03846944	GCA_001278445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/445/GCA_001278445.1_ASM127844v1	26586878	20SD
Shigella flexneri	623	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.19626	50.6	-	MSJY02	249	4505	3926	1/4/17	3/4/17	Scaffold	University of California at Davis	SAMN03358412	GCA_001933085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/933/085/GCA_001933085.2_ASM193308v2	-	BCW_4875
Pseudomonas aeruginosa BL07	1402548	PRJNA219910	219910	Proteobacteria	Gammaproteobacteria	6.55649	66.2	-	AXPT01	9	6172	5982	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360720	GCA_000481005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/005/GCA_000481005.1_Pseu_aeru_BL07_V1	-	BL07
Acinetobacter baumannii	470	PRJNA308422	308422	Proteobacteria	Gammaproteobacteria	4.09261	39	-	LJHB01	77	4021	3851	8/18/16	4/6/17	Scaffold	CHU A Coruna	SAMN04038510	GCA_001707985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/985/GCA_001707985.1_ASM170798v1	28328989	ST-2_clon_2010
Streptococcus agalactiae GB00092	1154900	PRJNA86473	86473	Terrabacteria group	Firmicutes	2.20414	35.4	-	ALSU01	47	2249	2109	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991149	GCA_000290055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/055/GCA_000290055.1_ASM29005v1	-	GB00092
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.08276	41.1	-	CEDX01	85	2066	1975	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233905	GCA_000939075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/075/GCA_000939075.1_Velvet_assembly	-	LS2O
Pseudomonas syringae	317	PRJNA387592	387592	Proteobacteria	Gammaproteobacteria	5.80487	59.4	-	NHTA01	133	5245	4746	9/20/17	9/22/17	Contig	Max Planck Institute 	SAMN07158952	GCA_002318805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/805/GCA_002318805.1_ASM231880v1	28880925	KN2.a.3
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.60963	38.2	-	FJFI01	42	3340	3166	2/20/16	3/27/17	Contig	SC	SAMEA2058284	GCA_900050235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/235/GCA_900050235.1_10771_1_37	-	2531STDY5467318
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.49102	50.8	-	FTVS01	371	5060	4253	1/28/17	2/26/17	Contig	SC	SAMEA2054637	GCA_900158455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/455/GCA_900158455.1_9803_4_43	-	2090STDY5461861
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.65697	66.5	-	MUTJ01	117	8212	7813	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001909	GCA_001993495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/495/GCA_001993495.1_ASM199349v1	-	VC14762
Burkholderia pseudomallei MSHR1029	1435991	PRJNA231489	231489	Proteobacteria	Betaproteobacteria	7.20083	68.1	-	JQDB01	3	7411	6828	11/11/14	3/25/17	Scaffold	Los Alamos National Laboratory	SAMN02997350	GCA_000775655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/655/GCA_000775655.1_BPJ	25676747	MSHR1029
Bacillus thuringiensis serovar toumanoffi	180862	PRJNA349211	349211	Terrabacteria group	Firmicutes	7.12048	34.7	-	NFEB01	148	7477	6897	5/17/17	5/24/17	Scaffold	Huazhong Agricultural University	SAMN05934552	GCA_002147315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/315/GCA_002147315.1_ASM214731v1	-	BGSC 4N1
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.02972	47.5	-	JSTO01	103	3843	3688	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104859	GCA_000789035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/035/GCA_000789035.1_ASM78903v1	25538191	2012HC-11
Clostridioides difficile DA00307	1151361	PRJNA85897	85897	Terrabacteria group	Firmicutes	4.14727	28.4	-	AVKJ01	219	3906	3730	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766679	GCA_000450665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/665/GCA_000450665.2_ASM45066v2	-	DA00307
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.77459	32.2	-	MRKI01	151	1824	1546	4/19/17	4/22/17	Scaffold	FOI Swedish Defence Research Agency	SAMN03773894	GCA_002100875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/875/GCA_002100875.1_ASM210087v1	28348839	FDC422
Brucella abortus B10-0973	1328360	PRJNA200944	200944	Proteobacteria	Alphaproteobacteria	3.28645	57.2	-	ATGL01	4	3384	3162	6/21/13	3/24/17	Contig	Broad Institute	SAMN02092523	GCA_000413835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/835/GCA_000413835.1_Bruc_abor_biovar_1_B10-0973_V1	-	B10-0973
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.01379	37.9	-	MLOF01	374	2107	1832	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297097	GCA_001869535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/535/GCA_001869535.1_ASM186953v1	27118061	AWRIB619
Vibrio parahaemolyticus S113	1394648	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.13699	45.2	-	AWJM01	829	4990	4535	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338962	GCA_000490175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/175/GCA_000490175.1_S113	-	S113
Bacillus subtilis	1423	PRJNA245170	245170	Terrabacteria group	Firmicutes	4.26379	43.4	-	JMEF01	125	4319	3940	5/15/14	6/24/14	Contig	Kingston Uniiversity	SAMN02732193	GCA_000691185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/185/GCA_000691185.1_ASM69118v1	24948771	KATMIRA1933
Klebsiella pneumoniae BIDMC 36	1328425	PRJNA202048	202048	Proteobacteria	Gammaproteobacteria	5.2086	57.5	-	AYHW01	2	5163	4944	10/30/13	2/21/17	Scaffold	Broad Institute	SAMN02138667	GCA_000492295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/295/GCA_000492295.1_Kleb_pneu_BIDMC_36_V1	-	BIDMC 36
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.92976	27.9	-	LFQF01	72	3746	3527	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779955	GCA_001574355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/355/GCA_001574355.1_ASM157435v1	26939550	SU0729
Enterococcus faecalis EnGen0363	1169289	PRJNA157747	157747	Terrabacteria group	Firmicutes	2.94664	37.4	-	ASDD01	17	2940	2796	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847605	GCA_000392935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/935/GCA_000392935.1_Ente_faec_RMC5_V1	-	RMC5
Streptococcus mutans B85SM-B	1225200	PRJNA173261	173261	Terrabacteria group	Firmicutes	2.10192	36.9	-	ALZB01	46	2076	1947	1/24/14	3/24/17	Contig	New York University College of Dentistry	SAMN02641547	GCA_000522825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/825/GCA_000522825.1_out_k37_n4_samp16-contigs.fa	24291226	B85SM-B
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.1512	52.4	-	CQOX01	72	2515	2201	3/23/15	4/11/17	Contig	SC	SAMEA1690478	GCA_001146365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/365/GCA_001146365.1_8727_8_70	-	GCGS166
Enterococcus faecium EnGen0145	1157440	PRJNA88309	88309	Terrabacteria group	Firmicutes	2.58977	38.2	-	AITJ01	6	2611	2379	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808970	GCA_000392085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/085/GCA_000392085.1_Ente_faec_9930238-2_V1	-	9930238-2
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.13005	41.2	-	CWAX01	84	2063	1887	6/23/15	3/26/17	Contig	SC	SAMEA1032950	GCA_001178145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/145/GCA_001178145.1_6903_4_49	-	EQUI0098
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.56494	67.4	-	DCNV01	342	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455561	GCA_002322815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/815/GCA_002322815.1_ASM232281v1	28894102	-
Paraphotobacterium marinum	1755811	PRJNA393364	393364	Proteobacteria	Gammaproteobacteria	2.59399	31.2493	chromosome large:NZ_CP022355.1/CP022355.1; chromosome small:NZ_CP022356.1/CP022356.1; plasmid p1:NZ_CP022357.1/CP022357.1	-	3	2525	2309	7/12/17	7/14/17	Complete Genome	"Third Institute of Oceanography, SOA"	SAMN07329764	GCA_002216855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/855/GCA_002216855.1_ASM221685v1	-	NSCS20N07D
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.45924	53.5	-	LSYB01	24	2386	2205	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496991	GCA_002203855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/855/GCA_002203855.1_S115	-	4014
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.44597	46.9	-	CHDN01	106	4161	3937	4/21/15	3/26/17	Scaffold	SC	SAMEA980178	GCA_001319385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/385/GCA_001319385.1_5103_7_8	-	ERL082399
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.13052	60.1	-	FCHZ01	21	4856	4697	1/21/16	3/27/17	Scaffold	SC	SAMEA2273945	GCA_001537345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/345/GCA_001537345.1_12082_2_78	-	2880STDY5682872
Lactobacillus plantarum	1590	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.37591	44.2	-	MKED01	110	3348	3033	2/1/17	3/29/17	Contig	ETH Zurich	SAMN05717760	GCA_001982195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/195/GCA_001982195.1_ASM198219v1	-	RI-510
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.74556	31.3	-	LBDL01	42	1824	1723	10/27/15	3/18/17	Contig	FDA	SAMN03344579	GCA_001417465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/465/GCA_001417465.1_ASM141746v1	-	CVM N51226F
Staphylococcus haemolyticus	1283	PRJNA356357	356357	Terrabacteria group	Firmicutes	2.43693	32.6	-	MRUY01	77	2347	2253	1/23/17	3/28/17	Scaffold	Northwest A&F University	SAMN06112365	GCA_001969875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/875/GCA_001969875.1_ASM196987v1	-	NW19
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.94197	55.1	-	JZDB01	133	4913	4613	3/20/15	3/25/17	Scaffold	University of Minnesota	SAMN03333178	GCA_000958815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/815/GCA_000958815.1_ASM95881v1	26438492	MNCRE71
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21203	64.1	-	FVBS01	14	5328	5154	3/10/17	3/18/17	Contig	SC	SAMEA2068666	GCA_900130865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/865/GCA_900130865.1_10665_3_37	-	207
Pseudomonas stutzeri	316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.32145	62.9	-	DGGN01	37	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452815	GCA_002392215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/215/GCA_002392215.1_ASM239221v1	28894102	-
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.35308	67.3	-	LPGB01	109	6699	6372	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449501	GCA_001530465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/465/GCA_001530465.1_ASM153046v1	-	MSMB1519WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.13651	55.1	-	LPQF01	69	5017	4791	12/21/15	3/27/17	Contig	JCVI	SAMN04252903	GCA_001472195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/195/GCA_001472195.1_SMART_398.v1	-	SMART_398
Pseudomonas sp. C5pp	1586081	PRJNA270389	270389	Proteobacteria	Gammaproteobacteria	6.15417	62.3	-	JWLN01	97	5858	5627	1/2/15	4/10/17	Contig	"Indian Institute of Technology, Bombay"	SAMN03266147	GCA_000814065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/065/GCA_000814065.1_ASM81406v1	27284139	C5pp
Streptomyces sp. NRRL F-5639	1463867	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.94077	72.6	-	JOGK01	163	6775	6397	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645453	GCA_000719425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/425/GCA_000719425.1_ASM71942v1	-	NRRL F-5639
Bacillus sp. 7788	2021692	PRJNA395369	395369	Terrabacteria group	Firmicutes	3.58753	41.8	-	NPDC01	78	3685	3556	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372733	GCA_002271405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/405/GCA_002271405.1_assembly-7788_v1	-	7788
Acinetobacter sp. SFD	1805635	PRJNA312764	312764	Proteobacteria	Gammaproteobacteria	3.12733	43.1	-	LSZJ01	18	2982	2827	5/19/16	4/6/17	Scaffold	University of aberdeen	SAMN04505924	GCA_001647575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/575/GCA_001647575.1_ASM164757v1	-	SFD
Clostridium sp. HMP27	1487921	PRJNA244413	244413	Terrabacteria group	Firmicutes	3.85095	31.4	-	JMFY01	72	3749	3453	10/9/14	10/9/14	Contig	Hydrocarbon Metagenomic Project	SAMN02726038	GCA_000765165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/165/GCA_000765165.1_ASM76516v1	-	HMP27
Staphylococcus sp. HMSC36C03	1608867	PRJNA274519	274519	Terrabacteria group	Firmicutes	2.6501	32.7	-	LTMS01	63	2725	2593	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498860	GCA_001838865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/865/GCA_001838865.1_ASM183886v1	-	HMSC36C03
Mycobacterium sp. SP-6446	1834162	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.22361	67.1	-	MBEM01	276	5000	4679	1/18/17	4/17/17	Contig	JCVI	SAMN04634274	GCA_001954045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/045/GCA_001954045.1_ASM195404v1	-	SP-6446
Mycobacterium sp. GA-1841	1834154	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.85788	66.3	-	MBEQ01	123	5562	5361	1/18/17	4/16/17	Contig	JCVI	SAMN04634278	GCA_001954135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/135/GCA_001954135.1_ASM195413v1	-	GA-1841
Prevotella sp. UBA3619	1947136	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.17338	47.5	-	DFLM01	19	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454522	GCA_002375165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/375/165/GCA_002375165.1_ASM237516v1	28894102	-
Staphylococcus sp. HMSC36D07	1608870	PRJNA274522	274522	Terrabacteria group	Firmicutes	2.86017	32.7	-	LTMR01	85	2980	2858	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498861	GCA_001838875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/875/GCA_001838875.1_ASM183887v1	-	HMSC36D07
Clostridium sp. K4410.MGS-306	1637501	PRJNA277012	277012	Terrabacteria group	Firmicutes	2.05437	36.8	-	LARD01	40	-	-	4/24/15	6/10/15	Contig	The Mayo Clinic	SAMN03449997	GCA_000980375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/375/GCA_000980375.1_ASM98037v1	26021920	-
Acinetobacter sp. SFC	1805632	PRJNA312757	312757	Proteobacteria	Gammaproteobacteria	3.34654	40.3	-	LSZG01	44	3249	3010	5/19/16	4/6/17	Scaffold	University of aberdeen	SAMN04505907	GCA_001647595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/595/GCA_001647595.1_ASM164759v1	-	SFC
Bacillus sp. 7520-S	2023231	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.36913	44.6	-	NPGD01	173	4304	4148	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372687	GCA_002271655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/655/GCA_002271655.1_assembly-7520-S_v1	-	7520-S
Streptomyces sp. NRRL F-5630	1463864	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.06304	72.9	-	JOGO01	237	6047	5666	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645457	GCA_000719475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/475/GCA_000719475.1_ASM71947v1	-	NRRL F-5630
Pseudomonas sp. W15Feb9B	550743	PRJNA265207	265207	Proteobacteria	Gammaproteobacteria	6.03159	60.4	-	JTKF01	102	5409	5308	1/26/15	4/17/17	Contig	Florida A&M University	SAMN03151543	GCA_000828175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/175/GCA_000828175.1_ASM82817v1	27330991	W15Feb9B
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.20092	54.6	-	LPQE01	102	5175	4941	12/21/15	3/27/17	Contig	JCVI	SAMN04252904	GCA_001472215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/215/GCA_001472215.1_SMART_405.v1	-	SMART_405
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.14036	67.6	-	LPGC01	79	5678	5391	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449502	GCA_001530495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/495/GCA_001530495.1_ASM153049v1	-	MSMB1520WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96619	64.2	-	FRZM01	17	4906	4767	12/14/16	3/21/17	Contig	SC	SAMEA2068667	GCA_900130875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/875/GCA_900130875.1_10665_3_40	-	210
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.88575	55.2	-	JZDD01	131	4851	4566	3/20/15	3/25/17	Scaffold	University of Minnesota	SAMN03333180	GCA_000958845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/845/GCA_000958845.1_ASM95884v1	26438492	MNCRE52
Melissococcus plutonius S1	1385937	PRJNA215018	215018	Terrabacteria group	Firmicutes	2.07386	31.2115	chromosome:NZ_CP006683.1/CP006683.1; plasmid pMEPL_178:NZ_CP006684.1/CP006684.1	-	2	1836	1586	9/4/14	4/2/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05771071	GCA_000747585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/585/GCA_000747585.1_ASM74758v1	-	S1
Campylobacter coli CVM 41904	1440776	PRJNA232266	232266	Proteobacteria	delta/epsilon subdivisions	1.70605	31.4	-	JAJL01	193	1812	1661	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887114	GCA_001418825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/825/GCA_001418825.1_Campylobacter_coli_CVM_41904_v1.0	-	CVM 41904
Lactobacillus plantarum	1590	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.30638	44.3	-	MKEF01	151	3282	3060	2/1/17	3/29/17	Contig	ETH Zurich	SAMN05717762	GCA_001982245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/245/GCA_001982245.1_ASM198224v1	-	RI-512
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.08338	60	-	FCKC01	14	4821	4654	1/21/16	3/27/17	Scaffold	SC	SAMEA2273970	GCA_001537365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/365/GCA_001537365.1_12082_3_5	-	2880STDY5682897
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.84716	47.1	-	CGBV01	55	4600	4382	3/15/15	3/26/17	Scaffold	SC	SAMEA980188	GCA_001319405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/405/GCA_001319405.1_4976_7_6	-	SZ662/97
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.40359	53.4	-	LSXZ01	28	2302	2136	6/20/17	6/22/17	Contig	Northumbria University	SAMN04496985	GCA_002203865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/865/GCA_002203865.1_S113	-	2803
Francisella sp. CA97-1460	1542390	PRJNA260085	260085	Proteobacteria	Gammaproteobacteria	1.86161	31.2017	chromosome:NZ_CP009654.1/CP009654.1; plasmid pFCD_1:NZ_CP009655.1/CP009655.1	-	2	1846	1773	11/17/16	4/16/17	Complete Genome	Los Alamos National Laboratory	SAMN03107515	GCA_001880225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/225/GCA_001880225.1_ASM188022v1	-	CA97-1460
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.66463	66	-	DCOB01	49	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455556	GCA_002322825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/825/GCA_002322825.1_ASM232282v1	28894102	-
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15035	41.2	-	CVXQ01	83	2087	1895	6/24/15	3/26/17	Contig	SC	SAMEA1032952	GCA_001178165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/165/GCA_001178165.1_6817_2_80	-	EQUI0033
Enterococcus faecium EnGen0146	1157441	PRJNA88311	88311	Terrabacteria group	Firmicutes	2.66288	38.3	-	AITK01	11	2712	2472	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808971	GCA_000392105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/105/GCA_000392105.1_Ente_faec_9931110-4_V1	-	9931110-4
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.16148	52.4	-	CQLT01	66	2524	2205	3/23/15	4/11/17	Contig	SC	SAMEA1690317	GCA_001146625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/625/GCA_001146625.1_8289_2_34	-	GCGS034
Streptococcus mutans B88SM-A	1225201	PRJNA173262	173262	Terrabacteria group	Firmicutes	2.06195	36.7	-	ALZC01	75	2044	1923	1/24/14	3/24/17	Contig	New York University College of Dentistry	SAMN02641548	GCA_000522845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/845/GCA_000522845.1_out_k27_n4_samp17-contigs.fa	24291226	B88SM-A
Enterococcus faecalis ATCC 35038	1169290	PRJNA157749	157749	Terrabacteria group	Firmicutes	2.97624	37.5	-	ASDE01	10	3046	2884	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847606	GCA_000392955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/955/GCA_000392955.1_Ente_faec_ATCC_35038_V1	-	ATCC 35038
Clostridium botulinum	1491	PRJNA286797	286797	Terrabacteria group	Firmicutes	3.94591	28	-	LFQG01	137	3840	3613	2/25/16	3/27/17	Contig	Northern Arizona University	SAMN03779980	GCA_001574365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/365/GCA_001574365.1_ASM157436v1	26939550	SU0635W
Klebsiella pneumoniae BIDMC 25	1328420	PRJNA202036	202036	Proteobacteria	Gammaproteobacteria	5.44003	57	-	AYHX01	5	5419	5094	10/30/13	2/21/17	Scaffold	Broad Institute	SAMN02138655	GCA_000492315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/315/GCA_000492315.1_Kleb_pneu_BIDMC_25_V1	-	BIDMC 25
Bacillus subtilis	1423	PRJNA240915	240915	Terrabacteria group	Firmicutes	4.07942	43.8	-	JHCA01	28	4004	3033	8/6/14	10/21/14	Contig	Microbial Gene Research and Resources Facility	SAMN02697041	GCA_000738015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/015/GCA_000738015.1_ASM73801v1	25278534	D7XPN1
Vibrio parahaemolyticus S112	1394647	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.03323	45.3	-	AWJN01	683	4762	4546	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338961	GCA_000490195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/195/GCA_000490195.1_S112	-	S112
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.99621	38	-	MLOJ01	327	2101	1841	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297101	GCA_001869565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/565/GCA_001869565.1_ASM186956v1	27118061	AWRIB634
Brucella abortus S99	1397701	PRJNA218060	218060	Proteobacteria	Alphaproteobacteria	3.25318	57.2	-	AWTU01	25	3355	3023	9/30/13	3/24/17	Contig	Madurai Kamaraj University	SAMN02470287	GCA_000472245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/245/GCA_000472245.1_Denovo_assembly	25146137	S99
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.83454	32.4	-	MRLA01	424	1941	1467	4/19/17	4/22/17	Scaffold	FOI Swedish Defence Research Agency	SAMN03773838	GCA_002101125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/125/GCA_002101125.1_ASM210112v1	28348839	FDC099
Clostridioides difficile DA00310	1151362	PRJNA85899	85899	Terrabacteria group	Firmicutes	3.90994	28.6	-	AVKK01	615	3648	3486	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766680	GCA_000450685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/685/GCA_000450685.2_ASM45068v2	-	DA00310
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.05883	47.5	-	JSTR01	105	3881	3725	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104862	GCA_000789055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/055/GCA_000789055.1_ASM78905v1	25538191	2012HC-16
Bacillus thuringiensis serovar thompsoni	44162	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.36503	35	-	NFEC01	151	6755	6234	5/17/17	5/24/17	Scaffold	Huazhong Agricultural University	SAMN05934553	GCA_002147325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/325/GCA_002147325.1_ASM214732v1	-	BGSC 4O1
Burkholderia pseudomallei 305	425067	PRJNA18775	18775	Proteobacteria	Betaproteobacteria	7.45365	67.9	-	AAYX01	36	7686	7086	3/28/07	5/18/17	Contig	TIGR	SAMN02441778	GCA_000169715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/715/GCA_000169715.1_ASM16971v1	-	305
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.20989	67.2	-	MUTS01	57	7647	7355	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001919	GCA_001993515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/515/GCA_001993515.1_ASM199351v1	-	VC14112
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.64813	50.8	-	FTVV01	378	5227	4445	1/28/17	2/26/17	Contig	SC	SAMEA2054640	GCA_900158475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/475/GCA_900158475.1_9803_4_46	-	2090STDY5461864
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54005	38.3	-	FJJC01	64	3238	3093	2/20/16	3/27/17	Contig	SC	SAMEA2080685	GCA_900050245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/245/GCA_900050245.1_10625_2_82	-	2532STDY5467555
Pseudomonas syringae	317	PRJNA387592	387592	Proteobacteria	Gammaproteobacteria	6.3249	59.2	-	NHTB01	243	5789	5469	9/20/17	9/22/17	Contig	Max Planck Institute 	SAMN07158951	GCA_002318815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/815/GCA_002318815.1_ASM231881v1	28880925	LMC.P91
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03838	41.2	-	CEEB01	80	2029	1918	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233912	GCA_000939095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/095/GCA_000939095.1_Velvet_assembly	-	LS3H
Streptococcus agalactiae GB00111	1154902	PRJNA86477	86477	Terrabacteria group	Firmicutes	2.09566	35.4	-	ALSW01	34	2159	1995	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991151	GCA_000290075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/075/GCA_000290075.1_ASM29007v1	-	GB00111
Acinetobacter baumannii A13	1388759	PRJNA215700	215700	Proteobacteria	Gammaproteobacteria	4.13724	39	-	AVPO01	66	4056	3904	1/12/17	3/22/17	Scaffold	Institute of Microbiology Chinese Academy of Sciences	SAMN06218435	GCA_001951035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/035/GCA_001951035.1_A13v1	24809232	A13
Pseudomonas aeruginosa BL06	1402547	PRJNA219909	219909	Proteobacteria	Gammaproteobacteria	6.99869	65.9	-	AXPU01	13	6678	6482	10/24/13	3/16/17	Scaffold	Broad Institute	SAMN02360719	GCA_000481025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/025/GCA_000481025.1_Pseu_aeru_BL06_V1	-	BL06
Shigella flexneri	623	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.3969	50.5	-	MSJZ02	293	4753	4159	1/4/17	3/4/17	Scaffold	University of California at Davis	SAMN03358413	GCA_001933135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/933/135/GCA_001933135.2_ASM193313v2	-	BCW_4876
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.85189	35	-	JQOM01	335	4401	3950	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949558	GCA_001568525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/525/GCA_001568525.1_ASM156852v1	26833181	56662
Streptococcus pyogenes ABC020062474	1439309	PRJNA233003	233003	Terrabacteria group	Firmicutes	1.81901	38.4	-	JJIV01	5	1847	1735	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567352	GCA_000631605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/605/GCA_000631605.1_Stre_pyog_ABC020062474_V1	-	ABC020062474
Neisseria meningitidis 65014	1095675	PRJNA76281	76281	Proteobacteria	Betaproteobacteria	2.17937	51.9	-	ANRY01	25	2546	2176	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055154	GCA_000327785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/785/GCA_000327785.2_ASM32778v2	-	65014
Helicobacter pylori HP250AFiV	1159068	PRJNA89307	89307	Proteobacteria	delta/epsilon subdivisions	1.58308	39.4	-	APEQ01	42	1571	1423	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436779	GCA_000345785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/785/GCA_000345785.2_ASM34578v2	-	HP250AFiV
Streptococcus pneumoniae GA04175	760745	PRJNA48411	48411	Terrabacteria group	Firmicutes	2.16163	39.6	-	AIKL01	9	2360	2079	3/7/12	3/8/17	Contig	Institute for Genome Sciences	SAMN00632912	GCA_000251285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/285/GCA_000251285.2_ASM25128v2	-	GA04175
Francisella halioticida	549298	PRJNA389776	389776	Proteobacteria	Gammaproteobacteria	2.19743	31.2	chromosome:NZ_CP022132.1/CP022132.1	-	1	2351	2096	6/30/17	7/3/17	Complete Genome	Swedish Defence Research Agency (FOI)	SAMN07207140	GCA_002211785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/785/GCA_002211785.1_ASM221178v1	-	DSM 23729
Mycobacterium tuberculosis PanR0611	1352582	PRJNA210059	210059	Terrabacteria group	Actinobacteria	4.39811	65.3995	chromosome:NZ_CM002115.1/CM002115.1	ATSB01	1	4314	4083	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471111	GCA_000445615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/615/GCA_000445615.1_fedora0611c_IS	23884993	PanR0611
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.34023	69	-	LMVU01	180	5115	4748	4/4/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04229403	GCA_001610285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/285/GCA_001610285.1_ASM161028v1	-	MAH-E-57-3
Bacillus cereus VD140	1053235	PRJNA70437	70437	Terrabacteria group	Firmicutes	5.7094	35	-	AHFD01	16	6029	5652	5/16/13	3/24/17	Scaffold	Broad Institute	SAMN02596867	GCA_000399545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/545/GCA_000399545.1_Baci_cere_VD140_V1	-	VD140
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.486	32.1	-	LWBW01	155	2541	2396	4/15/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04606870	GCA_001622445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/445/GCA_001622445.1_ASM162244v1	-	LRKNS062
Listeria monocytogenes	1639	PRJNA275565	275565	Terrabacteria group	Firmicutes	3.03291	37.9	-	JYNF01	23	3130	3025	3/12/15	2/27/17	Scaffold	University of Veterinary Medicine Vienna	SAMN03349770	GCA_000951975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/951/975/GCA_000951975.1_ASM95197v1	-	3KSM
Yersinia pestis PY-66	992166	PRJNA64359	64359	Proteobacteria	Gammaproteobacteria	4.57394	47.9	-	AKSZ01	1315	4543	4103	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141487	GCA_000269385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/385/GCA_000269385.1_ASM26938v1	-	PY-66
Campylobacter jejuni BJ-CJGB96114	1316920	PRJNA196553	196553	Proteobacteria	delta/epsilon subdivisions	1.61333	30.5	-	ASXM01	11	1675	1579	1/15/16	3/20/17	Scaffold	"State Key Laboratory for Infectious Disease Prevention and Control, and National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China."	SAMN04412553	GCA_001516505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/505/GCA_001516505.1_ASM151650v1	-	BJ-CJGB96114
Prochlorococcus sp. MIT 0604	1501268	PRJNA246696	246696	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.78006	31.2	chromosome:NZ_CP007753.1/CP007753.1	-	1	1959	1903	9/25/14	4/9/17	Complete Genome	MIT	SAMN02769551	GCA_000757845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/845/GCA_000757845.1_ASM75784v1	-	MIT 0604
Candidatus Kinetoplastibacterium oncopeltii TCC290E	1208920	PRJNA169068	169068	Proteobacteria	Betaproteobacteria	0.810172	31.2	chromosome:NC_020299.1/CP003805.1	-	1	761	694	2/19/13	4/17/17	Complete Genome	VCU	SAMN02641644	GCA_000340865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/865/GCA_000340865.1_ASM34086v1	23345457	TCC290E
Clostridium cellulovorans 743B	573061	PRJNA32609	32609	Terrabacteria group	Firmicutes	5.26222	31.2	chromosome:NC_014393.1/CP002160.1	-	1	4435	4261	8/11/10	6/15/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002614	GCA_000145275.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/275/GCA_000145275.1_ASM14527v1	-	743B
Prochlorococcus marinus str. MIT 9312	74546	PRJNA13910	13910	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.7092	31.2	chromosome:NC_007577.1/CP000111.1	-	1	1883	1826	11/2/05	3/29/17	Complete Genome	DOE Joint Genome Institute	SAMN02598321	GCA_000012645.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/645/GCA_000012645.1_ASM1264v1	-	MIT 9312
Campylobacter jejuni BJ-CJGB96299	1316921	PRJNA196554	196554	Proteobacteria	delta/epsilon subdivisions	1.68718	30.5	-	ASXN01	12	1772	1665	1/15/16	3/20/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China."	SAMN04412554	GCA_001516515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/515/GCA_001516515.1_ASM151651v1	-	BJ-CJGB96299
Yersinia pestis PY-88	992170	PRJNA64367	64367	Proteobacteria	Gammaproteobacteria	4.63452	47.5	-	AKTD01	682	4596	4200	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141491	GCA_000269405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/405/GCA_000269405.1_ASM26940v1	-	PY-88
Listeria monocytogenes	1639	PRJNA277132	277132	Terrabacteria group	Firmicutes	3.04381	37.9	-	JZHB01	41	3086	2986	3/17/15	2/27/17	Scaffold	University of Veterinary Medicine Vienna	SAMN03384339	GCA_000955685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/955/685/GCA_000955685.1_ASM95568v1	-	10KSM
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.71479	31.8	-	LWBX01	70	2781	2625	4/15/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04606871	GCA_001622455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/455/GCA_001622455.1_ASM162245v1	-	LRKNS064
Bacillus cereus VD184	1053242	PRJNA70451	70451	Terrabacteria group	Firmicutes	6.33203	35.2	-	AHFK01	47	6756	6274	5/16/13	3/24/17	Scaffold	Broad Institute	SAMN02596874	GCA_000399565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/565/GCA_000399565.1_Baci_cere_VD184_V1	-	VD184
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.47295	68.8	-	LNBB01	501	5128	4805	4/4/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04229489	GCA_001610435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/435/GCA_001610435.1_ASM161043v1	-	MAH-P-0913
Mycobacterium tuberculosis PanR0702	1352583	PRJNA210060	210060	Terrabacteria group	Actinobacteria	4.40698	65.3489	chromosome:NZ_CM002117.1/CM002117.1	ATSC01	1	4313	4062	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471095	GCA_000445635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/635/GCA_000445635.1_fedora0702f_IS	23884993	PanR0702
Campylobacter cuniculorum DSM 23162 = LMG 24588	1121267	PRJNA66793	66793	Proteobacteria	delta/epsilon subdivisions	1.93777	31.1968	chromosome:NZ_CP020867.1/CP020867.1; plasmid pCUN1:NZ_CP020868.1/CP020868.1; plasmid pCUN2:NZ_CP020869.1/CP020869.1	-	3	1908	1813	4/21/17	4/24/17	Complete Genome	"USDA, ARS, WRRC"	SAMN03737969	GCA_002104335.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/335/GCA_002104335.1_ASM210433v1	-	LMG 24588
Streptococcus pneumoniae GA13499	760747	PRJNA48651	48651	Terrabacteria group	Firmicutes	2.09682	39.9	-	AIJZ01	18	2298	1970	3/7/12	3/8/17	Contig	Institute for Genome Sciences	SAMN00718784	GCA_000251305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/305/GCA_000251305.2_ASM25130v2	-	GA13499
Helicobacter pylori HP250ASi	1159069	PRJNA89309	89309	Proteobacteria	delta/epsilon subdivisions	1.57908	39.4	-	APER01	50	1563	1415	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436702	GCA_000345805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/805/GCA_000345805.2_ASM34580v2	-	HP250ASi
Neisseria meningitidis 63049	1095678	PRJNA76287	76287	Proteobacteria	Betaproteobacteria	2.19532	51.9	-	ANRV01	23	2559	2145	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055158	GCA_000327805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/805/GCA_000327805.2_ASM32780v2	-	63049
Streptococcus pyogenes ABC020060220	1439294	PRJNA233001	233001	Terrabacteria group	Firmicutes	1.82322	38.4	-	JJIW01	3	1852	1739	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567350	GCA_000631625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/625/GCA_000631625.1_Stre_pyog_ABC020060220_V1	-	ABC020060220
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.67946	34.9	-	JQOS01	369	4292	3804	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949567	GCA_001568535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/535/GCA_001568535.1_ASM156853v1	26833181	A05D31
Shigella flexneri	623	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.33022	50.7	-	MSKA02	296	4684	4085	1/4/17	3/4/17	Scaffold	University of California at Davis	SAMN03358414	GCA_001933155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/933/155/GCA_001933155.2_ASM193315v2	-	BCW_4877
Pseudomonas aeruginosa BL05	1402546	PRJNA219908	219908	Proteobacteria	Gammaproteobacteria	6.38329	66.4	-	AXPV01	3	5999	5856	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360718	GCA_000481045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/045/GCA_000481045.1_Pseu_aeru_BL05_V1	-	BL05
Acinetobacter baumannii	470	PRJNA383256	383256	Proteobacteria	Gammaproteobacteria	3.80122	39	-	NDXK01	77	3631	3487	5/1/17	5/3/17	Scaffold	"GUANGZHOU CDC,China"	SAMN06760911	GCA_002116575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/116/575/GCA_002116575.1_ASM211657v1	-	2012046
Streptococcus agalactiae GB00115	1154903	PRJNA86479	86479	Terrabacteria group	Firmicutes	1.98502	35.3	-	ALSX01	35	2045	1893	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991152	GCA_000290095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/095/GCA_000290095.1_ASM29009v1	-	GB00115
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	1.97482	41.3	-	CEHD01	63	1960	1868	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234095	GCA_000939175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/175/GCA_000939175.1_Velvet_assembly	-	S98Y
Pseudomonas syringae	317	PRJNA387592	387592	Proteobacteria	Gammaproteobacteria	6.1896	59	-	NHTC01	137	5551	5317	9/20/17	9/22/17	Contig	Max Planck Institute 	SAMN07158950	GCA_002318825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/825/GCA_002318825.1_ASM231882v1	28880925	LMC.P80
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.36292	38.3	-	FJET01	32	3081	2954	2/20/16	3/27/17	Contig	SC	SAMEA2065278	GCA_900050555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/555/GCA_900050555.1_10771_3_91	-	2531STDY5467468
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.55331	50.8	-	FTVU01	377	5125	4348	1/28/17	2/26/17	Contig	SC	SAMEA2054641	GCA_900158485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/485/GCA_900158485.1_9803_4_47	-	2090STDY5461865
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.70352	67	-	MUTU01	95	7236	6927	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001921	GCA_001993535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/535/GCA_001993535.1_ASM199353v1	-	VC14801
Burkholderia pseudomallei 14	441160	PRJNA19507	19507	Proteobacteria	Betaproteobacteria	6.70758	67.8	-	ABBJ01	1888	7420	6120	6/6/07	5/18/17	Contig	NMRC	SAMN02470665	GCA_000170435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/435/GCA_000170435.1_ASM17043v1	-	14
Bacillus thuringiensis serovar israelensis	1430	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.39384	35	-	NFED01	84	6938	6564	5/17/17	5/24/17	Scaffold	Huazhong Agricultural University	SAMN05934554	GCA_002147335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/335/GCA_002147335.1_ASM214733v1	-	BGSC 4Q1
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.04893	47.5	-	JSTQ01	170	3844	3683	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104861	GCA_000789075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/075/GCA_000789075.1_ASM78907v1	25538191	2012HC-15
Clostridioides difficile DA00313	1151363	PRJNA85901	85901	Terrabacteria group	Firmicutes	4.08356	28.4	-	AVKL01	112	3819	3641	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766681	GCA_000450705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/705/GCA_000450705.2_ASM45070v2	-	DA00313
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.80691	32.4	-	MRLC01	95	1858	1550	4/19/17	4/22/17	Scaffold	FOI Swedish Defence Research Agency	SAMN03773735	GCA_002101165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/165/GCA_002101165.1_ASM210116v1	28348839	F0784
Brucella abortus 82	1401691	PRJNA219446	219446	Proteobacteria	Alphaproteobacteria	3.25021	57.2	-	AXBQ01	66	3339	2921	9/30/13	4/10/17	Contig	National Center for Biotechnology RSE	SAMN02470870	GCA_000473805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/805/GCA_000473805.1_Brucella82	24371203	82
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.95975	37.8	-	MLOK01	221	1990	1798	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297102	GCA_001869575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/575/GCA_001869575.1_ASM186957v1	27118061	AWRIB661
Vibrio parahaemolyticus S111	1394646	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.1406	45.2	-	AWJO01	667	4838	4641	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338960	GCA_000490215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/215/GCA_000490215.1_S111	-	S111
Bacillus subtilis subsp. spizizenii RFWG1A4	932005	PRJNA60735	60735	Terrabacteria group	Firmicutes	3.99702	43.8	-	AJHM01	13	-	-	2/23/15	2/23/15	Contig	Wesleyan University	SAMN01985723	GCA_000931825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/825/GCA_000931825.1_G1A4	-	RFWG1A4
Klebsiella pneumoniae BIDMC 24	1328419	PRJNA202035	202035	Proteobacteria	Gammaproteobacteria	5.38163	57.3	-	AYHY01	6	5382	5127	10/30/13	2/21/17	Scaffold	Broad Institute	SAMN02138654	GCA_000492335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/335/GCA_000492335.1_Kleb_pneu_BIDMC_24_V1	-	BIDMC 24
Clostridium botulinum	1491	PRJNA293039	293039	Terrabacteria group	Firmicutes	4.0008	28	-	LIIP01	160	3798	3620	3/9/17	3/11/17	Contig	Institut Pasteur	SAMN03996597	GCA_002024365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/365/GCA_002024365.1_ASM202436v1	-	224-13
Enterococcus faecalis EnGen0364	1169291	PRJNA157753	157753	Terrabacteria group	Firmicutes	2.9899	37.4	-	ASDF01	13	2984	2815	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847607	GCA_000392975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/975/GCA_000392975.1_Ente_faec_T6_V1	-	T6
Streptococcus mutans str. B16 P Sm1	1225186	PRJNA173263	173263	Terrabacteria group	Firmicutes	2.32985	36.9	-	ALZD01	58	2322	2163	1/24/14	3/24/17	Contig	New York University College of Dentistry	SAMN02641549	GCA_000522865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/865/GCA_000522865.1_out_k43_n4_samp18-contigs.fa	24291226	B16 P Sm1
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.1542	52.4	-	CQNP01	70	2534	2197	3/22/15	4/11/17	Contig	SC	SAMEA1690440	GCA_001146925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/925/GCA_001146925.1_8289_2_73	-	GCGS073
Enterococcus faecium EnGen0147	1157442	PRJNA88313	88313	Terrabacteria group	Firmicutes	2.58923	38.3	-	AITL01	7	2625	2397	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808972	GCA_000392125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/125/GCA_000392125.1_Ente_faec_A17_Sv1_V1	-	A17 Sv1
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12421	41.2	-	CWBJ01	90	2065	1878	6/23/15	3/26/17	Contig	SC	SAMEA1032954	GCA_001178185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/185/GCA_001178185.1_6903_4_62	-	EQUI0111
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.40668	66.1	-	DDAJ01	240	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457244	GCA_002332595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/595/GCA_002332595.1_ASM233259v1	28894102	-
Melissococcus plutonius DAT561	1090974	PRJDA73165	73165	Terrabacteria group	Firmicutes	2.04525	31.1859	chromosome 1:NC_016938.1/AP012282.1	-	2	1761	1603	2/17/12	4/10/17	Complete Genome	National Center for Global Health and Medicine	SAMD00061002	GCA_000283975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/975/GCA_000283975.1_ASM28397v1	22582373	DAT561
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.44552	53.5	-	LSYG01	24	2356	2187	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497029	GCA_002203895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/895/GCA_002203895.1_S132	-	2173
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.47716	47	-	CIFH01	102	4212	3970	4/21/15	3/26/17	Scaffold	SC	SAMEA980190	GCA_001319425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/425/GCA_001319425.1_4976_7_4	-	H230/89
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.05144	60.1	-	FCFI01	14	4780	4627	1/21/16	3/27/17	Scaffold	SC	SAMEA2274104	GCA_001537405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/405/GCA_001537405.1_12045_8_26	-	2880STDY5683035
Lactobacillus plantarum	1590	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.32423	44.4	-	MKEC01	66	3292	3093	2/1/17	3/29/17	Contig	ETH Zurich	SAMN05717759	GCA_001982335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/335/GCA_001982335.1_ASM198233v1	-	RI-509
Campylobacter coli CVM 41898	1440010	PRJNA232257	232257	Proteobacteria	delta/epsilon subdivisions	1.68121	31.4	-	JAJK01	105	1754	1652	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887113	GCA_001418845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/845/GCA_001418845.1_Campylobacter_coli_CVM_41898_v1.0	-	CVM 41898
Staphylococcus haemolyticus	1283	PRJNA267549	267549	Terrabacteria group	Firmicutes	7.19101	50.7	-	JUQL01	2865	-	-	7/10/15	7/13/16	Contig	University of Washington	SAMN03198063	GCA_001074655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/655/GCA_001074655.1_ASM107465v1	26230489	855_SHAE
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.68473	56.3	-	JZDF01	71	4522	4318	3/20/15	3/25/17	Scaffold	University of Minnesota	SAMN03333182	GCA_000958885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/885/GCA_000958885.1_ASM95888v1	26438492	MNCRE4
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.90814	64.1	-	FVBJ01	8	4910	4793	3/10/17	3/18/17	Contig	SC	SAMEA1970107	GCA_900130885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/885/GCA_900130885.1_10665_3_41	-	211
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.56419	67	-	LPGH01	243	6830	6371	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449507	GCA_001530525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/525/GCA_001530525.1_ASM153052v1	-	MSMB1559WGS
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.03257	55.1	-	LPQC01	100	5006	4744	12/21/15	3/27/17	Contig	JCVI	SAMN04252906	GCA_001472225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/225/GCA_001472225.1_SMART_416.v1	-	SMART_416
Pseudomonas sp. FeS53a	1604022	PRJNA273010	273010	Proteobacteria	Gammaproteobacteria	5.93797	67.3	-	JYFT01	85	5459	5290	2/23/15	4/10/17	Contig	UFRGS	SAMN03288244	GCA_000931385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/385/GCA_000931385.1_ASM93138v1	25838496	FeS53a
Streptomyces sp. NRRL B-3229	1463836	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.69412	71.1	-	JOGP01	180	7709	7363	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645458	GCA_000719505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/505/GCA_000719505.1_ASM71950v1	-	NRRL B-3229
Bacillus sp. 7586-K	2021690	PRJNA395369	395369	Terrabacteria group	Firmicutes	5.38451	35.3	-	NPCL01	252	5330	5166	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372713	GCA_002271785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/785/GCA_002271785.1_assembly-7586-K_v1	-	7586-K
Acinetobacter sp. WCHA60	1879050	PRJNA327706	327706	Proteobacteria	Gammaproteobacteria	3.84868	38.1	-	MBPR02	150	3696	3526	7/29/16	5/23/17	Scaffold	"West China Hospital, Sichuan University"	SAMN05356836	GCA_001696605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/605/GCA_001696605.2_ASM169660v2	-	WCHA60
Clostridium sp. UNK.MGS-6	1638787	PRJNA277012	277012	Terrabacteria group	Firmicutes	2.4115	36.6	-	LBCC01	255	-	-	4/24/15	6/10/15	Contig	The Mayo Clinic	SAMN03456689	GCA_000980555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/555/GCA_000980555.1_ASM98055v1	26021920	-
Staphylococcus sp. HMSC36D12	1608871	PRJNA274523	274523	Terrabacteria group	Firmicutes	2.8594	32.6	-	LTMQ01	86	3005	2885	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498878	GCA_001838895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/895/GCA_001838895.1_ASM183889v1	-	HMSC36D12
Prevotella sp. UBA4217	1947153	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.91597	52.1	-	DFTH01	17	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06450686	GCA_002379425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/425/GCA_002379425.1_ASM237942v1	28894102	-
Mycobacterium sp. IS-1264	1834158	PRJNA305922	305922	Terrabacteria group	Actinobacteria	4.92271	67.3	-	MBES01	101	4733	4549	1/18/17	4/17/17	Contig	JCVI	SAMN04634282	GCA_001954195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/195/GCA_001954195.1_ASM195419v1	-	IS-1264
Mycobacterium sp. IS-2888	1834159	PRJNA305922	305922	Terrabacteria group	Actinobacteria	4.87105	67.3	-	MBET01	123	4710	4513	1/18/17	4/17/17	Contig	JCVI	SAMN04634283	GCA_001954215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/215/GCA_001954215.1_ASM195421v1	-	IS-2888
Prevotella sp. UBA4376	1947163	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.36889	40.9	-	DGRY01	204	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451342	GCA_002391185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/185/GCA_002391185.1_ASM239118v1	28894102	-
Staphylococcus sp. HMSC36F05	1608872	PRJNA274524	274524	Terrabacteria group	Firmicutes	2.72202	32.7	-	LTMP01	53	2824	2698	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498869	GCA_001838925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/925/GCA_001838925.1_ASM183892v1	-	HMSC36F05
Clostridium sp. IODB-O3	1701581	PRJNA292638	292638	Terrabacteria group	Firmicutes	4.8474	32.5	-	LIGD01	29	-	-	8/25/15	8/25/15	Contig	"Indian Oil Corporation Lmt, Faridabad"	SAMN03982945	GCA_001273975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/975/GCA_001273975.1_ASM127397v1	-	IODB-O3
Acinetobacter sp. WCHA34	1879049	PRJNA327706	327706	Proteobacteria	Gammaproteobacteria	3.75963	49.1	-	MBPQ02	125	3731	3550	7/29/16	5/24/17	Scaffold	"West China Hospital, Sichuan University"	SAMN05356835	GCA_001696615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/615/GCA_001696615.2_ASM169661v2	-	WCHA34
Bacillus sp. 7504-2	2022547	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.7496	38.1	-	NPGC01	134	4586	4443	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372675	GCA_002272205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/205/GCA_002272205.1_assembly-7504-2_v1	-	7504-2
Streptomyces sp. NRRL F-5727	1463871	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.94581	73.2	-	JOGX01	187	7325	6950	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645466	GCA_000719555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/555/GCA_000719555.1_ASM71955v1	-	NRRL F-5727
Pseudomonas sp. 10-1B	1546029	PRJNA274896	274896	Proteobacteria	Gammaproteobacteria	6.34651	62.4	-	JYKS01	102	5814	5520	2/26/15	4/10/17	Contig	Agricultural Research Council	SAMN03333332	GCA_000935045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/045/GCA_000935045.1_ASM93504v1	25953172	10-1B
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.21772	54.9	-	LPQD01	95	5247	4998	12/21/15	3/27/17	Contig	JCVI	SAMN04252905	GCA_001472255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/255/GCA_001472255.1_SMART_409.v1	-	SMART_409
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.77058	67	-	LPGL01	112	7131	6707	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449511	GCA_001530545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/545/GCA_001530545.1_ASM153054v1	-	MSMB1628WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18054	64.2	-	FRZK01	30	5192	5044	12/14/16	3/21/17	Contig	SC	SAMEA2070536	GCA_900130895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/895/GCA_900130895.1_10665_3_42	-	212
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.90865	55.1	-	JZDE01	62	4855	4603	3/20/15	3/25/17	Scaffold	University of Minnesota	SAMN03333181	GCA_000958925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/925/GCA_000958925.1_ASM95892v1	26438492	MNCRE9
Staphylococcus haemolyticus	1283	PRJEB2655	204314	Terrabacteria group	Firmicutes	3.11807	32.6	-	CSPC01	2808	2546	2538	3/22/15	6/13/15	Contig	SC	SAMEA1484792	GCA_001207475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/475/GCA_001207475.1_7893_8_1	-	BSAR207
Campylobacter coli CVM 41915	1440011	PRJNA232268	232268	Proteobacteria	delta/epsilon subdivisions	1.87918	31.1	-	JAJM01	314	2027	1846	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887115	GCA_001419005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/005/GCA_001419005.1_Campylobacter_coli_CVM_41915_v1.0	-	CVM 41915
Lactobacillus plantarum	1590	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.10267	44.7	-	MKDZ01	52	3015	2877	2/1/17	3/29/17	Contig	ETH Zurich	SAMN05717755	GCA_001982345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/345/GCA_001982345.1_ASM198234v1	-	RI-505
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.10943	60.1	-	FCGX01	32	4798	4656	1/21/16	3/27/17	Scaffold	SC	SAMEA2273913	GCA_001537425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/425/GCA_001537425.1_12082_2_48	-	2880STDY5682840
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.51451	46.8	-	CHJR01	129	4255	4004	4/21/15	3/26/17	Scaffold	SC	SAMEA980192	GCA_001319445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/445/GCA_001319445.1_4976_7_2	-	H692/94
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.29492	53.3	-	LSYH01	18	2203	2051	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497031	GCA_002203905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/905/GCA_002203905.1_S133	-	2225
Campylobacter coli	195	PRJNA350584	350584	Proteobacteria	delta/epsilon subdivisions	1.92481	31.1787	chromosome:NZ_CP017875.1/CP017875.1; plasmid pCCDM224L:NZ_CP017877.1/CP017877.1; plasmid pCCDM224S:NZ_CP017876.1/CP017876.1	-	3	1997	1863	11/3/16	3/20/17	Complete Genome	University of Tulsa	SAMN05942188	GCA_001865535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/535/GCA_001865535.1_ASM186553v1	-	ZV1224
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.06196	66.3	-	DDBB01	11	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456966	GCA_002333345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/345/GCA_002333345.1_ASM233334v1	28894102	-
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12545	41.2	-	CVYQ01	78	2059	1875	6/23/15	3/26/17	Contig	SC	SAMEA1032955	GCA_001178205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/205/GCA_001178205.1_6830_4_92	-	EQUI0237
Enterococcus faecium EnGen0148	1157443	PRJNA88315	88315	Terrabacteria group	Firmicutes	2.61516	38.2	-	AITM01	8	2655	2427	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808973	GCA_000392145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/145/GCA_000392145.1_Ente_faec_E8sv3_V1	-	E8sv3
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.15511	52.4	-	CQNK01	74	2535	2208	3/22/15	4/11/17	Contig	SC	SAMEA1690461	GCA_001147865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/865/GCA_001147865.1_8289_2_94	-	GCGS094
Streptococcus mutans B23Sm1	1225202	PRJNA173265	173265	Terrabacteria group	Firmicutes	2.09541	37.1	-	ALZE01	87	2099	1943	1/24/14	3/24/17	Contig	New York University College of Dentistry	SAMN02641550	GCA_000522885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/885/GCA_000522885.1_out_k43_n4_samp19-contigs.fa	24291226	B23Sm1
Enterococcus faecalis EnGen0350	1169292	PRJNA157755	157755	Terrabacteria group	Firmicutes	2.99809	37.6	-	ASDG01	5	3049	2859	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847608	GCA_000392995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/995/GCA_000392995.1_Ente_faec_T17_V1	-	T17
Clostridium botulinum	1491	PRJNA293085	293085	Terrabacteria group	Firmicutes	4.00567	28	-	LIIQ01	148	3799	3624	3/9/17	3/11/17	Contig	Institut Pasteur	SAMN03996885	GCA_002024375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/375/GCA_002024375.1_ASM202437v1	-	429-13
Klebsiella pneumoniae BIDMC 23	1328418	PRJNA202034	202034	Proteobacteria	Gammaproteobacteria	5.49041	57.2	-	AYHZ01	8	5486	5197	10/30/13	2/21/17	Scaffold	Broad Institute	SAMN02138653	GCA_000492355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/355/GCA_000492355.1_Kleb_pneu_BIDMC_23_V1	-	BIDMC 23
Bacillus subtilis subsp. spizizenii RFWG4C10	932007	PRJNA60739	60739	Terrabacteria group	Firmicutes	3.98116	43.8	-	AJHN01	16	-	-	2/23/15	2/23/15	Contig	Wesleyan University	SAMN01985724	GCA_000931835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/835/GCA_000931835.1_G4C10	-	RFWG4C10
Vibrio parahaemolyticus S110	1394645	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.11745	45.2	-	AWJP01	667	4832	4594	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338959	GCA_000490235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/235/GCA_000490235.1_S110	-	S110
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.01295	37.9	-	MLOL01	486	2099	1809	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297103	GCA_001869605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/605/GCA_001869605.1_ASM186960v1	27118061	AWRIB663
Brucella abortus 80-1399	1328341	PRJNA200924	200924	Proteobacteria	Alphaproteobacteria	3.28187	57.2	-	ATHE01	7	3379	3147	6/21/13	3/24/17	Contig	Broad Institute	SAMN02092504	GCA_000478665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/665/GCA_000478665.1_Bruc_abor_biovar_1_80-1399_V1	-	80-1399
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.85365	32.4	-	MRLD01	99	1980	1558	4/19/17	4/22/17	Scaffold	FOI Swedish Defence Research Agency	SAMN03773734	GCA_002101185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/185/GCA_002101185.1_ASM210118v1	28348839	F0783
Clostridioides difficile F152	1151364	PRJNA85903	85903	Terrabacteria group	Firmicutes	4.35328	28.3	-	AVKM01	18	4074	3896	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01978901	GCA_000450725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/725/GCA_000450725.2_ASM45072v2	-	F152
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.01054	47.5	-	JSTU01	117	3802	3644	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104876	GCA_000789095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/095/GCA_000789095.1_ASM78909v1	25538191	2012HC-19
Bacillus thuringiensis serovar kyushuensis	44161	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.77858	35.3	-	NFEF01	204	6242	5677	5/17/17	6/15/17	Scaffold	Huazhong Agricultural University	SAMN05934557	GCA_002147395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/395/GCA_002147395.1_ASM214739v1	-	BGSC 4U1
Burkholderia pseudomallei 91	441159	PRJNA19505	19505	Proteobacteria	Betaproteobacteria	6.86779	67.8	-	ABBK01	1690	7604	6330	6/6/07	5/18/17	Contig	NMRC	SAMN02470659	GCA_000170455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/455/GCA_000170455.1_ASM17045v1	-	91
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.21517	67.1	-	MUTX01	101	6756	6445	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001924	GCA_001993555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/555/GCA_001993555.1_ASM199355v1	-	VC15495
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.58852	50.8	-	FTWB01	385	5125	4377	1/28/17	2/26/17	Contig	SC	SAMEA2054647	GCA_900158545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/545/GCA_900158545.1_9803_4_53	-	2090STDY5461871
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.44532	38.3	-	FJGM01	22	3154	3043	2/20/16	3/27/17	Contig	SC	SAMEA1968877	GCA_900050565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/565/GCA_900050565.1_10625_2_4	-	2532STDY5467477
Pseudomonas syringae	317	PRJNA387592	387592	Proteobacteria	Gammaproteobacteria	6.2382	59	-	NHTD01	172	5633	5375	9/20/17	9/22/17	Contig	Max Planck Institute 	SAMN07158949	GCA_002318875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/875/GCA_002318875.1_ASM231887v1	28880925	LMC.P10
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04745	41.1	-	CECQ01	65	2042	1949	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233873	GCA_000939235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/235/GCA_000939235.1_Velvet_assembly	-	LL-R
Streptococcus agalactiae GB00174	1154904	PRJNA86481	86481	Terrabacteria group	Firmicutes	2.08329	35.6	-	ALSY01	74	2133	1954	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991155	GCA_000290115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/115/GCA_000290115.1_ASM29011v1	-	GB00174
Acinetobacter baumannii	470	PRJNA339377	339377	Proteobacteria	Gammaproteobacteria	3.95183	39	-	MEDG01	57	3886	3690	5/8/17	5/10/17	Scaffold	Hospital Universitario La Paz	SAMN05590239	GCA_002119265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/265/GCA_002119265.1_ASM211926v1	28438568	71
Pseudomonas aeruginosa BL04	1402545	PRJNA219907	219907	Proteobacteria	Gammaproteobacteria	7.33338	65.9	-	AXPW01	11	7051	6785	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360717	GCA_000481065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/065/GCA_000481065.1_Pseu_aeru_BL04_V1	-	BL04
Shigella flexneri	623	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.22478	50.7	-	MSKB02	267	4597	4016	1/4/17	3/4/17	Scaffold	University of California at Davis	SAMN03358416	GCA_001933165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/933/165/GCA_001933165.2_ASM193316v2	-	BCW_4880
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.60529	35	-	JQOU01	351	4222	3751	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949569	GCA_001568565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/565/GCA_001568565.1_ASM156856v1	26833181	CMCC-2
Streptococcus pyogenes ABC020056794	1439271	PRJNA232999	232999	Terrabacteria group	Firmicutes	1.8204	38.5	-	JJIX01	5	1841	1729	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567348	GCA_000631645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/645/GCA_000631645.1_Stre_pyog_ABC020056794_V1	-	ABC020056794
Neisseria meningitidis 4119	1095679	PRJNA76289	76289	Proteobacteria	Betaproteobacteria	2.23614	51.5	-	ANRU01	42	2570	2212	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055159	GCA_000327825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/825/GCA_000327825.2_ASM32782v2	-	4119
Helicobacter pylori HP250ASii	1159070	PRJNA89311	89311	Proteobacteria	delta/epsilon subdivisions	1.58007	39.4	-	APES01	43	1565	1414	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436780	GCA_000345825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/825/GCA_000345825.2_ASM34582v2	-	HP250ASii
Streptococcus pneumoniae GA05245	760748	PRJNA48653	48653	Terrabacteria group	Firmicutes	2.16538	39.6	-	AILL01	12	2354	2073	3/7/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00738289	GCA_000251325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/325/GCA_000251325.2_ASM25132v2	-	GA05245
Campylobacter coli	195	PRJNA358687	358687	Proteobacteria	delta/epsilon subdivisions	1.84494	31.1747	chromosome:NZ_CP018900.1/CP018900.1; plasmid pCOS502:NZ_CP018901.1/CP018901.1	-	2	1922	1805	1/5/17	3/21/17	Complete Genome	USDA	SAMN06177343	GCA_001936355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/355/GCA_001936355.1_ASM193635v1	-	YH502
Mycobacterium tuberculosis PanR0703	1352584	PRJNA210061	210061	Terrabacteria group	Actinobacteria	4.39828	65.4498	chromosome:NZ_CM002113.1/CM002113.1	ATSD01	1	4298	4061	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471101	GCA_000445655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/655/GCA_000445655.1_fedora0703c_IS	23884993	PanR0703
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.39912	68.7	-	LNAY01	851	5051	4698	4/4/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04229486	GCA_001610445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/445/GCA_001610445.1_ASM161044v1	-	MAH-E-149-3
Bacillus cereus VDM006	1085379	PRJNA73137	73137	Terrabacteria group	Firmicutes	5.42693	35.6	-	AHFT01	41	5680	5172	5/16/13	4/10/17	Scaffold	Broad Institute	SAMN02596883	GCA_000399585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/585/GCA_000399585.1_Baci_cere_VDM006_V1	-	VDM006
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.5719	32	-	LWCV01	142	2610	2471	4/18/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04622367	GCA_001622485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/485/GCA_001622485.1_ASM162248v1	-	LRKNS075
Listeria monocytogenes	1639	PRJNA277144	277144	Terrabacteria group	Firmicutes	3.02428	37.9	-	JZHC01	44	3066	2961	3/17/15	2/27/17	Scaffold	University of Veterinary Medicine Vienna	SAMN03386933	GCA_000955695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/955/695/GCA_000955695.1_ASM95569v1	-	11KSM
Yersinia pestis PY-94	992176	PRJNA64379	64379	Proteobacteria	Gammaproteobacteria	4.6449	47.5	-	AKTJ01	585	4619	4192	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141497	GCA_000269425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/425/GCA_000269425.1_ASM26942v1	-	PY-94
Campylobacter jejuni HB-CJGB-LC	1316919	PRJNA196561	196561	Proteobacteria	delta/epsilon subdivisions	1.65425	30.6	-	ASXO01	11	1736	1626	1/15/16	3/20/17	Scaffold	"State Key Laboratory for Infectious Disease Prevention and Control, and National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China"	SAMN04412555	GCA_001516565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/565/GCA_001516565.1_ASM151656v1	-	HB-CJGB-LC
Clostridium autoethanogenum DSM 10061	1341692	PRJNA291963	291963	Terrabacteria group	Firmicutes	4.35245	31.1	chromosome:NZ_CP012395.1/CP012395.1	-	1	4003	3829	1/4/16	4/11/17	Complete Genome	JLU	SAMN03956958	GCA_001484725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/725/GCA_001484725.1_ASM148472v1	26692227	DSM 10061
candidate division SR1 bacterium RAAC1_SR1_1	1394709	PRJNA217185	217185	unclassified Bacteria	Bacteria candidate phyla	1.17776	31.1	chromosome:CP006913.1	-	1	1099	1059	12/4/13	9/19/17	Complete Genome	"University of California, Berkeley"	SAMN00998488	GCA_000503875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/875/GCA_000503875.1_ASM50387v1	-	RAAC1_SR1_1
Candidatus Liberibacter americanus str. Sao Paulo	1261131	PRJNA181147	181147	Proteobacteria	Alphaproteobacteria	1.1952	31.1	chromosome:NC_022793.1/CP006604.1	-	1	1028	953	11/12/13	4/17/17	Complete Genome	University of Florida	SAMN02604175	GCA_000496595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/595/GCA_000496595.1_ASM49659v1	24200077	Sao Paulo
Clostridium autoethanogenum DSM 10061	1341692	PRJNA219420	219420	Terrabacteria group	Firmicutes	4.3522	31.1	chromosome:NC_022592.1/CP006763.1	-	1	4018	3737	10/28/13	4/9/17	Complete Genome	Oak Ridge National Lab	SAMN02358571	GCA_000484505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/505/GCA_000484505.1_ASM48450v1	24655715	DSM 10061
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.70723	30.6	-	MUJW01	47	1787	1672	2/15/17	3/22/17	Scaffold	University of California at Davis	SAMN04532416	GCA_002000335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/335/GCA_002000335.1_ASM200033v1	-	BCW_6923
Yersinia pestis PY-95	992177	PRJNA64381	64381	Proteobacteria	Gammaproteobacteria	4.68727	47.5	-	AKTK01	456	4555	4240	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141498	GCA_000269445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/445/GCA_000269445.1_ASM26944v1	-	PY-95
Listeria monocytogenes	1639	PRJNA276408	276408	Terrabacteria group	Firmicutes	3.02012	37.9	-	JYOJ01	33	3070	2963	3/23/15	2/27/17	Scaffold	University of Veterinary Medicine Vienna	SAMN03372545	GCA_000960445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/445/GCA_000960445.1_ASM96044v1	-	4KSM
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.67624	31.9	-	LWCW01	86	2750	2590	4/18/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04622480	GCA_001622495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/495/GCA_001622495.1_ASM162249v1	-	LRKNS076
Bacillus cereus VDM021	1085386	PRJNA73139	73139	Terrabacteria group	Firmicutes	5.47077	35.6	-	AHFU01	49	5709	5244	5/16/13	3/24/17	Scaffold	Broad Institute	SAMN02596884	GCA_000399605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/605/GCA_000399605.1_Baci_cere_VDM021_V1	-	VDM021
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.22106	68.6	-	LNAZ01	941	4872	4580	4/4/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04229487	GCA_001610465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/465/GCA_001610465.1_ASM161046v1	-	MAH-E-149-7
Mycobacterium tuberculosis PanR0707	1352585	PRJNA210062	210062	Terrabacteria group	Actinobacteria	4.40581	65.3995	chromosome:NZ_CM002111.1/CM002111.1	ATSE01	1	4296	4050	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471112	GCA_000445675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/675/GCA_000445675.1_fedora0707_IS	23884993	PanR0707
Mycoplasma suis str. Illinois	768700	PRJNA49421	49421	Terrabacteria group	Tenericutes	0.742431	31.1	chromosome:NC_015155.1/CP002525.1	-	1	874	817	2/18/11	4/7/17	Complete Genome	Purdue University	SAMN02603730	GCA_000179035.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/035/GCA_000179035.2_ASM17903v2	21317328	Illinois
Streptococcus pneumoniae GA05248	760749	PRJNA48655	48655	Terrabacteria group	Firmicutes	2.12784	39.8	-	AIKM01	10	2341	2069	3/7/12	3/8/17	Contig	Institute for Genome Sciences	SAMN00632913	GCA_000251345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/345/GCA_000251345.2_ASM25134v2	-	GA05248
Helicobacter pylori HP250BFi	1159071	PRJNA89313	89313	Proteobacteria	delta/epsilon subdivisions	1.59116	39.4	-	APET01	49	1597	1407	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436845	GCA_000345845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/845/GCA_000345845.2_ASM34584v2	-	HP250BFi
Neisseria meningitidis 9757	1095681	PRJNA76293	76293	Proteobacteria	Betaproteobacteria	2.24025	51.5	-	ANRS01	32	2593	2223	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055162	GCA_000327845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/845/GCA_000327845.2_ASM32784v2	-	9757
Streptococcus pyogenes ABC020048262	1439176	PRJNA232997	232997	Terrabacteria group	Firmicutes	1.78679	38.5	-	JJIY01	4	1798	1684	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567346	GCA_000631665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/665/GCA_000631665.1_Stre_pyog_ABC020048262_V1	-	ABC020048262
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.62018	34.9	-	JQOV01	242	4198	3823	2/24/16	3/27/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949575	GCA_001568575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/575/GCA_001568575.1_ASM156857v1	26833181	H30H0728
Shigella flexneri	623	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.16796	51	-	MSKC02	287	4511	3973	1/4/17	3/4/17	Scaffold	University of California at Davis	SAMN03358415	GCA_001933175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/933/175/GCA_001933175.2_ASM193317v2	-	BCW_4879
Pseudomonas aeruginosa BL03	1402544	PRJNA219906	219906	Proteobacteria	Gammaproteobacteria	7.05802	65.9	-	AXPX01	7	6696	6485	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360716	GCA_000481085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/085/GCA_000481085.1_Pseu_aeru_BL03_V1	-	BL03
Acinetobacter baumannii	470	PRJNA339399	339399	Proteobacteria	Gammaproteobacteria	3.95771	39	-	MEDH01	54	3891	3696	5/8/17	5/10/17	Scaffold	Hospital Universitario La Paz	SAMN05590405	GCA_002119355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/355/GCA_002119355.1_ASM211935v1	28438568	440
Streptococcus agalactiae GB00190	1154905	PRJNA86483	86483	Terrabacteria group	Firmicutes	1.97033	35.2	-	ALSZ01	20	2009	1907	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991153	GCA_000290135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/135/GCA_000290135.1_ASM29013v1	-	GB00190
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.13365	41.2	-	CEHV01	93	2113	1978	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233970	GCA_000939375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/375/GCA_000939375.1_Velvet_assembly	-	LSW
Pseudomonas syringae	317	PRJNA387592	387592	Proteobacteria	Gammaproteobacteria	5.90776	59.4	-	NHSU01	123	5325	5042	9/20/17	9/22/17	Contig	Max Planck Institute 	SAMN07158959	GCA_002318895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/895/GCA_002318895.1_ASM231889v1	28880925	LP868.1a
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.36458	38.3	-	FJEX01	27	3096	2956	2/20/16	3/27/17	Contig	SC	SAMEA1972354	GCA_900050975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/975/GCA_900050975.1_10396_8_34	-	2531STDY5467456
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.58095	50.7	-	FTWD01	382	5080	4373	1/28/17	2/26/17	Contig	SC	SAMEA2054648	GCA_900158555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/555/GCA_900158555.1_9803_4_54	-	2090STDY5461872
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.18804	67.1	-	MUSL01	131	7763	7251	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001877	GCA_001993565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/565/GCA_001993565.1_ASM199356v1	-	VC11482
Burkholderia pseudomallei 9	441158	PRJNA19503	19503	Proteobacteria	Betaproteobacteria	6.80595	67.8	-	ABBL01	1762	7538	6252	6/6/07	5/18/17	Contig	NMRC	SAMN02470662	GCA_000170475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/475/GCA_000170475.1_ASM17047v1	-	9
Bacillus thuringiensis serovar colmeri	180851	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.64992	34.9	-	NFEI01	219	7072	6565	5/17/17	6/15/17	Scaffold	Huazhong Agricultural University	SAMN05934560	GCA_002147435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/435/GCA_002147435.1_ASM214743v1	-	BGSC 4X1
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.07895	47.4	-	JSTM01	110	3911	3748	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104873	GCA_000789115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/115/GCA_000789115.1_ASM78911v1	25538191	2012HC-08
Clostridioides difficile F249	1151366	PRJNA85907	85907	Terrabacteria group	Firmicutes	4.20652	28.5	-	AVKN01	111	3933	3787	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766683	GCA_000450745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/745/GCA_000450745.2_ASM45074v2	-	F249
Francisella tularensis subsp. holarctica	119857	PRJNA285145	285145	Proteobacteria	Gammaproteobacteria	1.76942	32.2	-	MRJP01	674	2094	1870	4/19/17	4/19/17	Contig	FOI Swedish Defence Research Agency	SAMN03774110	GCA_002100645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/645/GCA_002100645.1_ASM210064v1	28348839	FSC455
Brucella abortus 01-4165	1341669	PRJNA217072	217072	Proteobacteria	Alphaproteobacteria	3.36417	57.2	-	AXMP01	12	3453	3221	10/24/13	3/24/17	Contig	Broad Institute	SAMN02334526	GCA_000479955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/955/GCA_000479955.1_Bruc_abor_01-4165_V1	-	Jan-65
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.8679	37.9	-	MLOR01	339	1944	1665	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297109	GCA_001869615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/615/GCA_001869615.1_ASM186961v1	27118061	AWRIB712
Vibrio parahaemolyticus S109	1394644	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.05155	45.3	-	AWJQ01	395	4794	4591	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338958	GCA_000490255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/255/GCA_000490255.1_S109	-	S109
Bacillus subtilis subsp. spizizenii RFWG5B15	932008	PRJNA60741	60741	Terrabacteria group	Firmicutes	4.00616	43.7	-	AJHO01	15	-	-	2/23/15	2/23/15	Contig	Wesleyan University	SAMN01985725	GCA_000931845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/845/GCA_000931845.1_G5B15	-	RFWG5B15
Klebsiella pneumoniae BIDMC 22	1328417	PRJNA202033	202033	Proteobacteria	Gammaproteobacteria	5.44503	57.2	-	AYIA01	7	5384	5129	10/30/13	2/21/17	Scaffold	Broad Institute	SAMN02138652	GCA_000492375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/375/GCA_000492375.1_Kleb_pneu_BIDMC_22_V1	-	BIDMC 22
Clostridium botulinum	1491	PRJNA293087	293087	Terrabacteria group	Firmicutes	3.87583	27.9	-	LIIR01	126	3675	3509	3/9/17	3/11/17	Contig	Institut Pasteur	SAMN03996895	GCA_002024395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/395/GCA_002024395.1_ASM202439v1	-	301-13
Enterococcus faecalis EnGen0336	1169293	PRJNA157757	157757	Terrabacteria group	Firmicutes	2.87038	37.5	-	ASDH01	3	2885	2758	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847609	GCA_000393015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/015/GCA_000393015.1_Ente_faec_T5_V1	-	T5
Streptococcus mutans B111SM-A	1225203	PRJNA173268	173268	Terrabacteria group	Firmicutes	2.12499	36.9	-	ALZF01	39	2117	1987	1/24/14	3/24/17	Contig	New York University College of Dentistry	SAMN02641551	GCA_000522905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/905/GCA_000522905.1_out_k45_n4_samp20-contigs.fa	24291226	B111SM-A
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.09269	52.6	-	CQKQ01	80	2461	2124	3/22/15	4/11/17	Contig	SC	SAMEA1690385	GCA_001147965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/965/GCA_001147965.1_8289_2_83	-	GCGS083
Enterococcus faecium EnGen0149	1157444	PRJNA88317	88317	Terrabacteria group	Firmicutes	2.76986	37.9	-	AITO01	15	2827	2648	5/3/13	4/10/17	Scaffold	Broad Institute	SAMN00808974	GCA_000392165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/165/GCA_000392165.1_Ente_faec_H17243_V1	-	H17243
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12631	41.2	-	CWBP01	76	2057	1874	6/23/15	3/26/17	Contig	SC	SAMEA1032957	GCA_001178225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/225/GCA_001178225.1_6903_5_77	-	EQUI0126
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.52716	66.1	-	DDCN01	208	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454191	GCA_002335325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/325/GCA_002335325.1_ASM233532v1	28894102	-
Mycoplasma suis KI3806	708248	PRJNA43245	43245	Terrabacteria group	Tenericutes	0.70927	31.1	chromosome:NC_015153.1/FQ790233.1	-	1	817	771	2/17/11	4/7/17	Complete Genome	Institute of Veterinary Bacteriology	SAMEA3138343	GCA_000203215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/203/215/GCA_000203215.1_ASM20321v1	21398558	KI3806
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.41884	53.5	-	LSYI01	25	2331	2161	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497034	GCA_002203935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/935/GCA_002203935.1_S135	-	2393
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.4545	47.1	-	CGBA01	79	4163	3910	3/15/15	3/26/17	Scaffold	SC	SAMEA980202	GCA_001319465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/465/GCA_001319465.1_5116_3_2	-	SZ375/04
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.16724	59.9	-	FCFL01	21	4957	4797	1/21/16	3/27/17	Scaffold	SC	SAMEA2274084	GCA_001537445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/445/GCA_001537445.1_12045_8_9	-	2880STDY5683014
Lactobacillus plantarum	1590	PRJNA371738	371738	Terrabacteria group	Firmicutes	3.37691	44.3	-	MUZE01	86	3279	3101	2/21/17	2/23/17	Contig	University of Reading	SAMN06311425	GCA_002005385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/385/GCA_002005385.1_ASM200538v1	-	10CH
Campylobacter coli CVM 41917	1440012	PRJNA232269	232269	Proteobacteria	delta/epsilon subdivisions	1.85136	31	-	JAJN01	130	1951	1809	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887116	GCA_001419015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/015/GCA_001419015.1_Campylobacter_coli_CVM_41917_v1.0	-	CVM 41917
Staphylococcus haemolyticus	1283	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.82828	32.6	-	LORN01	16	2760	2447	12/21/15	12/21/15	Contig	US Food and Drug Administration 	SAMN03996289	GCA_001471285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/285/GCA_001471285.1_ASM147128v1	-	FDAARGOS_148
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.92749	55.9	-	JYMH01	77	4801	4579	4/3/15	4/20/17	Scaffold	University of Minnesota	SAMN03333158	GCA_000968725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/725/GCA_000968725.1_ASM96872v1	26438492	MNCRE16
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21239	64.1	-	FVAN01	8	5326	5149	3/10/17	3/18/17	Contig	SC	SAMEA2068668	GCA_900130905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/905/GCA_900130905.1_10665_3_43	-	213
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.19477	67.4	-	LPFN01	103	6520	6168	1/22/16	6/27/17	Contig	Northern Arizona University	SAMN03449487	GCA_001530565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/565/GCA_001530565.1_ASM153056v1	-	MSMB1488WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.38552	55	-	LPQA01	81	5358	5137	12/21/15	3/27/17	Contig	JCVI	SAMN04252908	GCA_001472295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/295/GCA_001472295.1_SMART_448.v1	-	SMART_448
Pseudomonas sp. ES3-33	1628833	PRJNA275214	275214	Proteobacteria	Gammaproteobacteria	6.07538	59.7	-	JZRI01	162	5674	5396	3/13/15	4/10/17	Contig	university of copenhagen	SAMN03339945	GCA_000952175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/175/GCA_000952175.1_ASM95217v1	25953191	ES3-33
Streptomyces sp. NRRL S-1824	1463889	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.82644	69.5	-	JOGZ01	215	7971	7360	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645468	GCA_000719575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/575/GCA_000719575.1_ASM71957v1	-	NRRL S-1824
Bacillus sp. 7894-2	2021695	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.36839	42	-	NPDG01	188	4387	4278	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372738	GCA_002272225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/225/GCA_002272225.1_assembly-7894-2_v1	-	7894-2
Acinetobacter sp. LCT-H3	1914307	PRJNA350360	350360	Proteobacteria	Gammaproteobacteria	3.13412	42.6	-	MODX01	98	3015	2824	11/3/16	4/6/17	Scaffold	"Chinese PLA General Hospital, Chinese PLA Postgraduate Medical School"	SAMN05938537	GCA_001866125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/125/GCA_001866125.1_ASM186612v1	-	LCT-H3
Clostridium sp. NkU-1	1095009	PRJDB860	243752	Terrabacteria group	Firmicutes	4.73728	44.1	-	BBDR01	41	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000511	GCA_001312405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/405/GCA_001312405.1_ASM131240v1	-	JCM 10519
Staphylococcus sp. HMSC36G04	1608873	PRJNA274525	274525	Terrabacteria group	Firmicutes	2.81082	32.6	-	LTMO01	84	2933	2809	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498904	GCA_001838935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/935/GCA_001838935.1_ASM183893v1	-	HMSC36G04
Prevotella sp. UBA3854	1947152	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.00572	48.7	-	DGHG01	138	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453638	GCA_002392565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/565/GCA_002392565.1_ASM239256v1	28894102	-
Mycobacterium sp. IS-836	1834160	PRJNA305922	305922	Terrabacteria group	Actinobacteria	5.0004	67.2	-	MBEU01	94	4834	4655	1/18/17	4/17/17	Contig	JCVI	SAMN04634285	GCA_001954275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/275/GCA_001954275.1_ASM195427v1	-	IS-836
Mycobacterium sp. D16Q13	1855657	PRJNA323571	323571	Terrabacteria group	Actinobacteria	4.90343	64.3	-	MAEW01	34	4846	4712	3/3/17	3/6/17	Contig	LNCC	SAMN05186776	GCA_002013375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/375/GCA_002013375.1_ASM201337v1	-	D16Q13
Prevotella sp. UBA3848	1947151	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.26875	50.9	-	DGHM01	81	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453327	GCA_002392685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/685/GCA_002392685.1_ASM239268v1	28894102	-
Staphylococcus sp. HMSC55D02	1608874	PRJNA274526	274526	Terrabacteria group	Firmicutes	2.51146	33.7	-	LTMN01	27	2373	2284	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498879	GCA_001838955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/955/GCA_001838955.1_ASM183895v1	-	HMSC55D02
Clostridium sp. Hs50	1095012	PRJDB861	243753	Terrabacteria group	Firmicutes	3.90756	27.4	-	BBDS01	383	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000512	GCA_001312425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/425/GCA_001312425.1_ASM131242v1	-	JCM 10522
Acinetobacter sp. AR2-3	1891969	PRJNA338661	338661	Proteobacteria	Gammaproteobacteria	3.22001	43	-	MJIQ01	113	3090	2877	11/14/16	4/10/17	Scaffold	New Mexico State University	SAMN05560419	GCA_001878775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/775/GCA_001878775.1_ASM187877v1	-	AR2-3
Bacillus sp. 7884-1	2021693	PRJNA395369	395369	Terrabacteria group	Firmicutes	6.00044	38	-	NPDD01	397	5780	5509	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372734	GCA_002272245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/245/GCA_002272245.1_assembly-7884-1_v1	-	7884-1
Streptomyces sp. NRRL F-5681	1463869	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.8216	72.7	-	JOHA01	81	6769	6487	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645469	GCA_000719585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/585/GCA_000719585.1_ASM71958v1	-	NRRL F-5681
Pseudomonas sp. KG01	1674920	PRJNA287706	287706	Proteobacteria	Gammaproteobacteria	6.31335	60.1	-	LFMW01	47	5920	5641	7/8/15	4/10/17	Contig	Pontificia Universidad Catolica de Valparaiso	SAMN03785348	GCA_001050345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/345/GCA_001050345.1_ASM105034v1	26294625	KG01
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.2525	55.1	-	LPPY01	87	5282	4991	12/21/15	3/27/17	Contig	JCVI	SAMN04252910	GCA_001472335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/335/GCA_001472335.1_SMART_488.v1	-	SMART_488
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.12594	66.8	-	LPGK01	176	7530	7084	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449510	GCA_001530625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/625/GCA_001530625.1_ASM153062v1	-	MSMB1608WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.10085	64.3	-	FRZG01	33	5070	4938	12/14/16	3/21/17	Contig	SC	SAMEA2071294	GCA_900130915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/915/GCA_900130915.1_10665_3_44	-	214
Enterobacter cloacae	550	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.93607	55.1	-	LBMV01	123	4909	4638	5/20/15	3/26/17	Scaffold	University of Minnesota	SAMN03333171	GCA_001010875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/875/GCA_001010875.1_ASM101087v1	26438492	MNCRE85
Staphylococcus haemolyticus	1283	PRJNA259935	259935	Terrabacteria group	Firmicutes	2.54812	32.6	-	JRAY01	180	2426	2250	8/15/16	8/15/16	Contig	Research Institute of Physical-Chemical Medicine	SAMN03014709	GCA_001705095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/095/GCA_001705095.1_ASM170509v1	-	864-1
Campylobacter coli CVM 41932	1440021	PRJNA232311	232311	Proteobacteria	delta/epsilon subdivisions	1.73768	31.4	-	JAJW01	28	1795	1706	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887122	GCA_001419145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/145/GCA_001419145.1_Campylobacter_coli_CVM_41932_v1.0	-	CVM 41932
Lactobacillus plantarum	1590	PRJNA327380	327380	Terrabacteria group	Firmicutes	3.16526	44.5	-	MQNK01	92	3169	2813	6/2/17	6/5/17	Contig	University of Turin	SAMN05341252	GCA_002165655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/655/GCA_002165655.1_ASM216565v1	-	S2T10D
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.08246	60	-	FCID01	13	4822	4649	1/21/16	3/27/17	Scaffold	SC	SAMEA2273951	GCA_001537465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/465/GCA_001537465.1_12082_2_82	-	2880STDY5682878
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	4.81069	47.3	-	CFLA01	63	4534	4331	3/15/15	3/26/17	Scaffold	SC	SAMEA980219	GCA_001319505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/505/GCA_001319505.1_4976_3_5	-	ERL073947
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.45085	53.5	-	LSYK01	48	2360	2190	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497033	GCA_002203945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/945/GCA_002203945.1_S137	-	2637
Clostridium ljungdahlii DSM 13528	748727	PRJNA13492	13492	Terrabacteria group	Firmicutes	4.63007	31.1	chromosome:NC_014328.1/CP001666.1	-	1	4305	4117	7/12/10	6/15/17	Complete Genome	Competence Network	SAMN02603159	GCA_000143685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/143/685/GCA_000143685.1_ASM14368v1	20616070	DSM 13528
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.1259	41.2	-	CWEW01	78	2054	1874	6/23/15	3/26/17	Contig	SC	SAMEA1032958	GCA_001178245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/245/GCA_001178245.1_6903_8_63	-	EQUI0208
Enterococcus faecium EnGen0151	1157446	PRJNA88321	88321	Terrabacteria group	Firmicutes	2.62182	38.3	-	AITQ01	9	2662	2427	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808976	GCA_000392195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/195/GCA_000392195.1_Ente_faec_H17575_V1	-	H17575
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14542	52.4	-	CQIL01	79	2507	2178	3/22/15	4/11/17	Contig	SC	SAMEA1690447	GCA_001148185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/185/GCA_001148185.1_8727_8_55	-	GCGS151
Streptococcus mutans B114SM-A	1225204	PRJNA173269	173269	Terrabacteria group	Firmicutes	2.11043	37	-	ALZG01	53	2095	1956	1/24/14	3/24/17	Contig	New York University College of Dentistry	SAMN02641552	GCA_000522925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/925/GCA_000522925.1_out_k45_n4_samp21-contigs.fa	24291226	B114SM-A
Enterococcus faecalis EnGen0351	1169294	PRJNA157759	157759	Terrabacteria group	Firmicutes	2.99194	37.5	-	ASDI01	3	3063	2880	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847610	GCA_000393035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/035/GCA_000393035.1_Ente_faec_T9_V1	-	T9
Clostridium botulinum	1491	PRJNA293158	293158	Terrabacteria group	Firmicutes	4.0238	27.9	-	LIIW01	106	3909	3728	3/9/17	3/11/17	Contig	Institut Pasteur	SAMN03998142	GCA_002024465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/465/GCA_002024465.1_ASM202446v1	-	1430-11
Klebsiella pneumoniae BIDMC 21	1328416	PRJNA202032	202032	Proteobacteria	Gammaproteobacteria	5.48148	57.1	-	AYIB01	11	5473	5180	10/30/13	2/21/17	Scaffold	Broad Institute	SAMN02138651	GCA_000492395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/395/GCA_000492395.1_Kleb_pneu_BIDMC_21_V1	-	BIDMC 21
Bacillus subtilis	1423	PRJNA276055	276055	Terrabacteria group	Firmicutes	4.18046	43.9	-	JYOG01	226	4323	3313	3/16/15	4/5/16	Contig	Saurashtra University	SAMN03365787	GCA_000952875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/875/GCA_000952875.1_ASM95287v1	26966205	C3
Vibrio parahaemolyticus S108	1394643	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.075	45.3	-	AWJR01	674	4884	4660	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338957	GCA_000490275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/275/GCA_000490275.1_S108	-	S108
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.87762	37.9	-	MLOS01	341	1931	1686	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297110	GCA_001869645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/645/GCA_001869645.1_ASM186964v1	27118061	AWRIB713
Brucella abortus 03-2770-11	1341670	PRJNA217070	217070	Proteobacteria	Alphaproteobacteria	3.32902	57.2	-	AXMR01	5	3422	3197	10/24/13	3/24/17	Contig	Broad Institute	SAMN02334524	GCA_000479995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/995/GCA_000479995.1_Bruc_abor_03-2770-11_V1	-	03-2770-11
Clostridioides difficile F253	1151367	PRJNA85909	85909	Terrabacteria group	Firmicutes	4.05659	28.6	-	AVKO01	437	3776	3598	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766684	GCA_000450765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/765/GCA_000450765.2_ASM45076v2	-	F253
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.01203	47.5	-	JSTN01	108	3820	3661	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104858	GCA_000789135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/135/GCA_000789135.1_ASM78913v1	25538191	2012HC-10
Bacillus thuringiensis serovar ostriniae	180883	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.36139	34.8	-	NFEJ01	70	6588	6208	5/17/17	5/24/17	Scaffold	Huazhong Agricultural University	SAMN05934561	GCA_002147475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/475/GCA_002147475.1_ASM214747v1	-	BGSC 4Z1
Burkholderia pseudomallei 7894	441156	PRJNA19497	19497	Proteobacteria	Betaproteobacteria	6.97829	67.6	-	ABBO01	1568	7653	6380	6/6/07	5/18/17	Contig	NMRC	SAMN02470670	GCA_000170535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/535/GCA_000170535.1_ASM17053v1	-	7894
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.71058	67	-	MUUA01	105	7275	6909	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001928	GCA_001993595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/595/GCA_001993595.1_ASM199359v1	-	VC8156
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.52412	50.7	-	FTWC01	372	5075	4282	1/28/17	2/26/17	Contig	SC	SAMEA2054651	GCA_900158575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/575/GCA_900158575.1_9803_4_57	-	2090STDY5461875
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.44444	38.3	-	FJFG01	25	3155	3046	2/20/16	3/27/17	Contig	SC	SAMEA2065724	GCA_900050995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/995/GCA_900050995.1_10771_3_69	-	2531STDY5467446
Pseudomonas syringae	317	PRJEB16201	348957	Proteobacteria	Gammaproteobacteria	6.56206	59.2	-	FNHM01	26	5917	5639	10/20/16	3/28/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444505	GCA_900103765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/765/GCA_900103765.1_IMG-taxon_2687453696_annotated_assembly	-	BS2122
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04677	41.1	-	CELL01	177	2073	1935	2/20/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233988	GCA_000939715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/715/GCA_000939715.1_Velvet_assembly	-	S11O
Streptococcus agalactiae GB00535	1154916	PRJNA86505	86505	Terrabacteria group	Firmicutes	2.02862	35.2	-	ALTK01	24	2083	1977	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991183	GCA_000290155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/155/GCA_000290155.1_ASM29015v1	-	GB00535
Acinetobacter baumannii	470	PRJNA380857	380857	Proteobacteria	Gammaproteobacteria	4.24388	39.1	-	NBNJ01	5	4193	3930	8/1/17	8/3/17	Scaffold	Yonsei University College of medicine	SAMN06650259	GCA_002237955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/955/GCA_002237955.1_ASM223795v1	-	SSMA8
Pseudomonas aeruginosa BL02	1402543	PRJNA219905	219905	Proteobacteria	Gammaproteobacteria	6.91365	66	-	AXPY01	6	6612	6443	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360715	GCA_000481105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/105/GCA_000481105.1_Pseu_aeru_BL02_V1	-	BL02
Shigella flexneri	623	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.33462	50.5	-	MSKD02	253	4705	4138	1/4/17	3/4/17	Scaffold	University of California at Davis	SAMN03358417	GCA_001933215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/933/215/GCA_001933215.2_ASM193321v2	-	BCW_4881
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.58146	35	-	JQOX01	227	4140	3768	2/24/16	3/27/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949573	GCA_001568605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/605/GCA_001568605.1_ASM156860v1	26833181	G30
Streptococcus pyogenes ABC020046534	1439146	PRJNA232996	232996	Terrabacteria group	Firmicutes	1.81112	38.4	-	JJIZ01	6	1838	1736	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567345	GCA_000631685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/685/GCA_000631685.1_Stre_pyog_ABC020046534_V1	-	ABC020046534
Neisseria meningitidis 9506	1095682	PRJNA76295	76295	Proteobacteria	Betaproteobacteria	2.24113	51.4	-	ANRR01	21	2599	2230	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055163	GCA_000327865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/865/GCA_000327865.2_ASM32786v2	-	9506
Helicobacter pylori HP250BFii	1159072	PRJNA89315	89315	Proteobacteria	delta/epsilon subdivisions	1.58275	39.4	-	APEU01	42	1566	1419	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436703	GCA_000345865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/865/GCA_000345865.2_ASM34586v2	-	HP250BFii
Streptococcus pneumoniae GA06083	760750	PRJNA48657	48657	Terrabacteria group	Firmicutes	2.10439	39.6	-	AIKN01	12	2273	2020	3/7/12	3/8/17	Contig	Institute for Genome Sciences	SAMN00690870	GCA_000251365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/365/GCA_000251365.2_ASM25136v2	-	GA06083
Candidatus Atelocyanobacterium thalassa isolate ALOHA	1453429	PRJNA30917	30917	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.44381	31.1	chromosome:NC_013771.1/CP001842.1	-	1	1219	1148	1/28/10	4/7/17	Complete Genome	University of California at Santa Cruz	SAMN02641594	GCA_000025125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/125/GCA_000025125.1_ASM2512v1	"1,900,844,820,173,730"	-
Mycobacterium tuberculosis PanR0708	1352586	PRJNA210063	210063	Terrabacteria group	Actinobacteria	4.39972	65.5499	chromosome:NZ_CM002109.1/CM002109.1	ATSF01	1	4265	4086	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471102	GCA_000445695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/695/GCA_000445695.1_fedora0708c_IS	23884993	PanR0708
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.9343	68.7	-	LNBA01	762	5964	5061	4/4/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04229488	GCA_001610475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/475/GCA_001610475.1_ASM161047v1	-	MAHP-04-13
Bacillus cereus B5-2	1085389	PRJNA73143	73143	Terrabacteria group	Firmicutes	5.84129	35.2	-	AHFW01	25	6275	5842	5/16/13	3/24/17	Scaffold	Broad Institute	SAMN02596886	GCA_000399625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/625/GCA_000399625.1_Baci_cere_B5-2_V1	-	B5-2
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.42917	32.3	-	LWCX01	215	2458	2299	4/18/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04622481	GCA_001622525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/525/GCA_001622525.1_ASM162252v1	-	LRKNS077
Listeria monocytogenes	1639	PRJNA276412	276412	Terrabacteria group	Firmicutes	3.02521	37.9	-	JYOL01	32	3066	2956	3/23/15	2/27/17	Scaffold	University of Veterinary Medicine Vienna	SAMN03372552	GCA_000960455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/455/GCA_000960455.1_ASM96045v1	-	6KSM
Yersinia pestis PY-101	992182	PRJNA64391	64391	Proteobacteria	Gammaproteobacteria	4.73227	47.6	-	AKTP01	500	4589	4253	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141503	GCA_000269465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/465/GCA_000269465.1_ASM26946v1	-	PY-101
Campylobacter jejuni subsp. jejuni CF93-6	360111	PRJNA16265	16265	Proteobacteria	delta/epsilon subdivisions	1.6763	30.5	-	AANJ01	14	1777	1665	1/27/06	3/15/17	Contig	TIGR	SAMN02435839	GCA_000168115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/115/GCA_000168115.1_ASM16811v1	-	CF93-6
Rickettsia canadensis str. McKiel	293613	PRJNA12952	12952	Proteobacteria	Alphaproteobacteria	1.15977	31.1	chromosome:NC_009879.1/CP000409.1	-	1	1142	909	10/1/07	4/6/17	Complete Genome	Univ. Iowa	SAMN02604083	GCA_000014345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/345/GCA_000014345.1_ASM1434v1	-	McKiel
Staphylococcus aureus subsp. aureus 71193	1155084	PRJNA66999	66999	Terrabacteria group	Firmicutes	2.715	32.9	chromosome:NC_017673.1/CP003045.1	-	1	2767	2598	4/13/12	5/19/17	Chromosome	Integrated Genomics	SAMN02603419	GCA_000258685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/685/GCA_000258685.1_ASM25868v1	22375071	71193
Staphylococcus aureus M1	1305598	PRJEB1620	194419	Terrabacteria group	Firmicutes	2.89156	32.7469	chromosome:NC_021059.1/HF937103.1; plasmid pSK67-M1:NC_021060.1/HF937104.1	-	2	3043	2898	4/15/13	3/2/17	Chromosome	KMAHVH	SAMEA2272540	GCA_000367745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/745/GCA_000367745.1_ASM36774v1	23792746	M1
Prochlorococcus marinus str. MIT 9215	93060	PRJNA18633	18633	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.73879	31.1	chromosome:NC_009840.1/CP000825.1	-	1	1921	1853	9/20/07	4/11/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598410	GCA_000018065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/018/065/GCA_000018065.1_ASM1806v1	18159947	MIT 9215
Campylobacter jejuni subsp. jejuni 260.94	360108	PRJNA16229	16229	Proteobacteria	delta/epsilon subdivisions	1.65785	30.5	-	AANK01	10	1744	1606	1/27/06	3/15/17	Contig	TIGR	SAMN02435860	GCA_000168135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/135/GCA_000168135.1_ASM16813v1	-	260.94
Yersinia pestis PY-103	992184	PRJNA64395	64395	Proteobacteria	Gammaproteobacteria	4.59187	47.8	-	AKTR01	933	4528	4140	6/15/12	5/19/17	Contig	Institute for Genome Sciences	SAMN02141505	GCA_000269485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/485/GCA_000269485.1_ASM26948v1	-	PY-103
Listeria monocytogenes	1639	PRJNA276834	276834	Terrabacteria group	Firmicutes	3.02404	37.9	-	JZCT01	28	3065	2965	3/23/15	2/27/17	Scaffold	University of Veterinary Medicine Vienna	SAMN03381199	GCA_000960575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/575/GCA_000960575.1_ASM96057v1	-	13KSM
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.71324	31.8	-	LWCY01	76	2788	2623	4/18/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04622482	GCA_001622545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/545/GCA_001622545.1_ASM162254v1	-	LRKNS084
Bacillus cereus BAG3O-1	1085388	PRJNA73141	73141	Terrabacteria group	Firmicutes	5.87504	35.2	-	AHFV01	6	6253	5836	5/16/13	4/10/17	Scaffold	Broad Institute	SAMN02596885	GCA_000399645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/645/GCA_000399645.1_Baci_cere_BAG3O-1_V1	-	BAG3O-1
Mycobacterium avium subsp. hominissuis	439334	PRJNA299461	299461	Terrabacteria group	Actinobacteria	5.47902	68.3	-	LNAX01	1232	5053	4696	4/4/16	4/5/17	Scaffold	Robert Koch Institute	SAMN04229413	GCA_001610515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/515/GCA_001610515.1_ASM161051v1	-	MAH-E-118
Mycobacterium tuberculosis PanR0801	1352587	PRJNA210064	210064	Terrabacteria group	Actinobacteria	4.40055	65.4995	chromosome:NZ_CM002112.1/CM002112.1	ATSG01	1	4276	4054	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471096	GCA_000445715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/715/GCA_000445715.1_fedora0801c_IS	23884993	PanR0801
Campylobacter coli RM1875	1183378	PRJNA162955	162955	Proteobacteria	delta/epsilon subdivisions	1.85872	31.0956	chromosome:NZ_CP007183.1/CP007183.1; plasmid pRM1875_2.4kb:NZ_CP007185.1/CP007185.1; plasmid pRM1875_3.3kb:NZ_CP007186.1/CP007186.1; plasmid pRM1875_3.4kbp:NZ_CP007187.1/CP007187.1; plasmid pRM1875_35kb:NZ_CP007184.1/CP007184.1	-	5	1965	1835	3/3/14	3/16/17	Complete Genome	US Department of Agriculture	SAMN02743856	GCA_000583755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/755/GCA_000583755.1_ASM58375v1	-	RM1875
Streptococcus pneumoniae GA07914	760756	PRJNA48669	48669	Terrabacteria group	Firmicutes	2.04631	39.8	-	AIKO01	8	2239	1979	3/7/12	3/8/17	Contig	Institute for Genome Sciences	SAMN00632920	GCA_000251385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/385/GCA_000251385.2_ASM25138v2	-	GA07914
Helicobacter pylori HP250BFiii	1159073	PRJNA89317	89317	Proteobacteria	delta/epsilon subdivisions	1.58137	39.4	-	APEV01	46	1565	1413	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436781	GCA_000345885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/885/GCA_000345885.2_ASM34588v2	-	HP250BFiii
Neisseria meningitidis NM174	1095684	PRJNA76299	76299	Proteobacteria	Betaproteobacteria	2.17479	51.7	-	ANRP01	18	2542	2173	12/21/12	3/15/17	Contig	Institute for Genome Sciences	SAMN01055165	GCA_000327885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/885/GCA_000327885.2_ASM32788v2	-	NM174
Streptococcus pyogenes ABC020046559	1439147	PRJNA232995	232995	Terrabacteria group	Firmicutes	1.83863	38.5	-	JJJA01	3	1855	1736	4/14/14	4/10/17	Scaffold	Broad Institute	SAMN02567344	GCA_000631705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/705/GCA_000631705.1_Stre_pyog_ABC020046559_V1	-	ABC020046559
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.83838	35	-	JQOZ01	309	4457	4038	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949577	GCA_001568615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/615/GCA_001568615.1_ASM156861v1	26833181	J42
Shigella flexneri	623	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.30593	50.6	-	MSKF02	289	4665	4072	1/4/17	3/4/17	Scaffold	University of California at Davis	SAMN03358419	GCA_001933235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/933/235/GCA_001933235.2_ASM193323v2	-	BCW_4883
Pseudomonas aeruginosa BL01	1402542	PRJNA219903	219903	Proteobacteria	Gammaproteobacteria	6.43615	66.3	-	AXPZ01	4	6077	5925	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360714	GCA_000481125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/125/GCA_000481125.1_Pseu_aeru_BL01_V1	-	BL01
Acinetobacter baumannii	470	PRJNA391101	391101	Proteobacteria	Gammaproteobacteria	3.93866	38.9	-	NKKO01	104	3897	3706	8/10/17	8/12/17	Scaffold	Universidade Federal de Uberlandia	SAMN07257378	GCA_002245595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/595/GCA_002245595.1_ASM224559v1	-	13
Streptococcus agalactiae GB00543	1154917	PRJNA86507	86507	Terrabacteria group	Firmicutes	2.12684	35.3	-	ALTL01	37	2193	2059	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991179	GCA_000290175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/175/GCA_000290175.1_ASM29017v1	-	GB00543
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.22183	41	-	CEHO01	121	2232	2075	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233951	GCA_000939915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/915/GCA_000939915.1_Velvet_assembly	-	LS8M
Pseudomonas syringae	317	PRJEB17346	351565	Proteobacteria	Gammaproteobacteria	6.07652	59	-	FOQB01	28	5468	5240	10/31/16	3/28/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444507	GCA_900113625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/625/GCA_900113625.1_IMG-taxon_2693429915_annotated_assembly	-	BS3827
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.53826	38.3	-	FJLJ01	58	3235	3086	2/20/16	3/27/17	Contig	SC	SAMEA2078037	GCA_900051005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/005/GCA_900051005.1_10625_3_94	-	2532STDY5467663
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.61907	50.8	-	FTWG01	390	5204	4406	1/28/17	2/26/17	Contig	SC	SAMEA2054652	GCA_900158585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/585/GCA_900158585.1_9803_4_58	-	2090STDY5461876
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.48017	67	-	MUUF01	95	7085	6694	2/10/17	4/2/17	Contig	University of British Columbia	SAMN05001934	GCA_001993615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/615/GCA_001993615.1_ASM199361v1	-	VC13476
Burkholderia pseudomallei 112	441154	PRJNA19495	19495	Proteobacteria	Betaproteobacteria	6.91904	68	-	ABBP01	1274	7514	6391	6/6/07	5/18/17	Contig	NMRC	SAMN02470661	GCA_000170555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/555/GCA_000170555.1_ASM17055v1	-	112
Bacillus thuringiensis serovar darmstadiensis	132264	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.8459	35.1	-	NFEK01	174	6385	5802	5/17/17	5/24/17	Scaffold	Huazhong Agricultural University	SAMN05934579	GCA_002147495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/495/GCA_002147495.1_ASM214749v1	-	YBT032
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.0224	47.5	-	JSTP01	128	3823	3666	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104860	GCA_000789155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/155/GCA_000789155.1_ASM78915v1	25538191	2012HC-12
Clostridioides difficile F314	1151368	PRJNA85911	85911	Terrabacteria group	Firmicutes	4.05656	28.4	-	AVKP01	54	3770	3599	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766685	GCA_000450785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/785/GCA_000450785.2_ASM45078v2	-	F314
Brucella abortus 99-9971-159	1341676	PRJNA217066	217066	Proteobacteria	Alphaproteobacteria	3.32294	57.2	-	AXMV01	21	3408	3168	10/24/13	3/24/17	Contig	Broad Institute	SAMN02334520	GCA_000480115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/115/GCA_000480115.1_Bruc_abor_99-9971-159_V1	-	99-9971-159
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.9697	37.9	-	MLOY01	306	2045	1791	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297116	GCA_001869655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/655/GCA_001869655.1_ASM186965v1	27118061	AWRIB819
Vibrio parahaemolyticus S106	1394642	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.07208	45.3	-	AWJS01	609	4826	4618	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338956	GCA_000490295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/295/GCA_000490295.1_S106	-	S106
Bacillus subtilis	1423	PRJEB9876	290051	Terrabacteria group	Firmicutes	5.35239	35.6	-	CYHR01	1907	5234	5222	8/27/15	8/27/15	Contig	University of Liverpool	SAMEA3484409	GCA_001286785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/785/GCA_001286785.1_Bacillus_JRS10	-	-
Klebsiella pneumoniae UCICRE 8	1328394	PRJNA201991	201991	Proteobacteria	Gammaproteobacteria	5.38581	57.2	-	AYIH01	10	5386	5174	10/30/13	2/21/17	Scaffold	Broad Institute	SAMN02138613	GCA_000492515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/515/GCA_000492515.1_Kleb_pneu_UCI_8_V1	-	UCICRE 8
Clostridium botulinum	1491	PRJNA353866	353866	Terrabacteria group	Firmicutes	4.23084	27.8	-	MWIV01	54	4080	3847	4/21/17	7/29/17	Contig	Northern Arizona University	SAMN06022736	GCA_002103795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/795/GCA_002103795.1_ASM210379v1	28733282	SU0972
Enterococcus faecalis EnGen0352	1169295	PRJNA157761	157761	Terrabacteria group	Firmicutes	2.78339	37.7	-	ASDJ01	4	2774	2593	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847611	GCA_000393055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/055/GCA_000393055.1_Ente_faec_T10_V1	-	T10
Streptococcus mutans B115SM-A	1225205	PRJNA173270	173270	Terrabacteria group	Firmicutes	2.28358	36.9	-	ALZH01	49	2252	2133	1/24/14	3/24/17	Contig	New York University College of Dentistry	SAMN02641553	GCA_000522945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/945/GCA_000522945.1_out_k41_n4_samp22-contigs.fa	24291226	B115SM-A
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14166	52.4	-	CQMX01	72	2501	2181	3/23/15	4/11/17	Contig	SC	SAMEA1690483	GCA_001149765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/765/GCA_001149765.1_8727_8_83	-	GCGS179
Enterococcus faecium EnGen0152	1157447	PRJNA88323	88323	Terrabacteria group	Firmicutes	3.05152	38	-	AITX01	47	3105	2887	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808977	GCA_000392215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/215/GCA_000392215.1_Ente_faec_HM1071_V1	-	HM1071
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12982	41.2	-	CWDR01	78	2048	1888	6/24/15	3/26/17	Contig	SC	SAMEA1032959	GCA_001178265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/265/GCA_001178265.1_6903_7_33	-	EQUI0178
Campylobacter coli RM4661	1183379	PRJNA162957	162957	Proteobacteria	delta/epsilon subdivisions	1.87224	31.0718	chromosome:CP007181.1; plasmid pRM4661_48kbp:CP007182.1	-	2	2007	1862	3/3/14	5/14/14	Complete Genome	US Department of Agriculture	SAMN02743855	GCA_000583775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/775/GCA_000583775.1_ASM58377v1	-	RM4661
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.4269	53.5	-	LSYM01	58	2344	2168	6/20/17	6/22/17	Contig	Northumbria University	SAMN04497032	GCA_002203965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/965/GCA_002203965.1_S139	-	4505
Yersinia enterocolitica	630	PRJEB2117	203890	Proteobacteria	Gammaproteobacteria	4.27356	49.1	-	CGBH01	55	3897	3753	3/15/15	3/26/17	Scaffold	SC	SAMEA859958	GCA_001319955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/955/GCA_001319955.1_5139_5_3	-	FE80217
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.01018	60.2	-	FCHW01	16	4727	4574	1/21/16	3/27/17	Scaffold	SC	SAMEA2273942	GCA_001537485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/485/GCA_001537485.1_12082_2_75	-	2880STDY5682869
Lactobacillus plantarum	1590	PRJNA327374	327374	Terrabacteria group	Firmicutes	3.31156	44.4	-	MPLC01	68	3291	2988	6/2/17	6/5/17	Contig	University of Turin	SAMN05332107	GCA_002165715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/715/GCA_002165715.1_ASM216571v1	-	O2T60C
Campylobacter coli CVM 41939	1440022	PRJNA232312	232312	Proteobacteria	delta/epsilon subdivisions	1.73673	31.3	-	JAJX01	24	1802	1704	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887123	GCA_001419225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/225/GCA_001419225.1_Campylobacter_coli_CVM_41939_v1.0	-	CVM 41939
Staphylococcus haemolyticus	1283	PRJNA259934	259934	Terrabacteria group	Firmicutes	2.47825	32.7	-	JRAZ01	144	2425	2258	8/15/16	8/15/16	Contig	Research Institute of Physical-Chemical Medicine	SAMN03014720	GCA_001705155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/155/GCA_001705155.1_ASM170515v1	-	527
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.7106	55.7	-	JWCB01	115	4561	4385	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197085	GCA_001052195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/195/GCA_001052195.1_ASM105219v1	26230489	1131_ECLO
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.10183	64.3	-	FRZF01	35	5078	4940	12/14/16	3/21/17	Contig	SC	SAMEA2070537	GCA_900130925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/925/GCA_900130925.1_10665_3_45	-	215
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.11186	67.4	-	LPFS01	99	6428	6073	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449492	GCA_001530685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/685/GCA_001530685.1_ASM153068v1	-	MSMB1507WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.63368	55.6	-	LPPX01	33	4485	4318	12/21/15	3/27/17	Contig	JCVI	SAMN04252911	GCA_001472355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/355/GCA_001472355.1_SMART_503.v1	-	SMART_503
Pseudomonas sp. RIT-PI-a	1681194	PRJNA289423	289423	Proteobacteria	Gammaproteobacteria	4.73286	62.3	-	LGIR01	35	4258	4129	7/28/15	4/10/17	Contig	Monash University Malaysia	SAMN03853640	GCA_001187875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/875/GCA_001187875.1_ASM118787v1	26586879	RIT-PI-a
Streptomyces sp. NRRL S-1813	1463888	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.47475	70.9	-	JOHB01	124	7630	7144	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645470	GCA_000719605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/605/GCA_000719605.1_ASM71960v1	-	NRRL S-1813
Bacillus sp. X2(2017)	2025586	PRJNA396911	396911	Terrabacteria group	Firmicutes	4.12516	43.7	-	NQJE01	38	4232	4016	8/30/17	9/1/17	Contig	CSIR- INSTITUTE OF MICROBIAL TECHNOLOGY	SAMN07442101	GCA_002278635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/635/GCA_002278635.1_ASM227863v1	-	X2(2017)
Acinetobacter sp. ANC 4558	1977876	PRJNA380882	380882	Proteobacteria	Gammaproteobacteria	3.66182	35.6	-	NEGH01	31	3527	3339	5/15/17	5/23/17	Scaffold	National Institute of Public Health	SAMN06641964	GCA_002135375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/375/GCA_002135375.1_ASM213537v1	-	ANC 4558
Clostridium sp. SCN 57-10	1660094	PRJNA279279	279279	Terrabacteria group	Firmicutes	1.73694	56.7	-	MEFT01	159	1833	1566	9/13/16	9/13/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN03652496	GCA_001725215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/725/215/GCA_001725215.1_ASM172521v1	26031303	-
Staphylococcus sp. HMSC55F09	1608875	PRJNA274527	274527	Terrabacteria group	Firmicutes	2.88702	32.7	-	LTMM01	108	3010	2872	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498871	GCA_001838975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/838/975/GCA_001838975.1_ASM183897v1	-	HMSC55F09
Prevotella sp. UBA3846	1947150	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	4.51878	42.6	-	DGHO01	164	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453335	GCA_002392725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/725/GCA_002392725.1_ASM239272v1	28894102	-
Mycobacterium sp. D16R24	1855656	PRJNA323571	323571	Terrabacteria group	Actinobacteria	5.21247	64	-	MAEV01	59	5220	4956	3/3/17	3/6/17	Contig	LNCC	SAMN05186774	GCA_002013385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/385/GCA_002013385.1_ASM201338v1	-	D16R24
Mycobacterium sp. D16Q14	1855658	PRJNA323571	323571	Terrabacteria group	Actinobacteria	5.16571	64	-	MAEX01	66	5216	4882	3/3/17	3/6/17	Contig	LNCC	SAMN05186777	GCA_002013415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/415/GCA_002013415.1_ASM201341v1	-	D16Q14
Prevotella sp. UBA3837	1947149	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.15494	57.7	-	DGHX01	194	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451315	GCA_002392835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/835/GCA_002392835.1_ASM239283v1	28894102	-
Staphylococcus sp. HMSC56B09	1608876	PRJNA274528	274528	Terrabacteria group	Firmicutes	2.7151	32.7	-	LTML01	62	2776	2663	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498903	GCA_001839005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/005/GCA_001839005.1_ASM183900v1	-	HMSC56B09
Clostridium sp. CAG:354_28_25	1896989	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.4805	27.9	-	MNRL01	20	1442	1385	12/23/16	12/23/16	Scaffold	None	SAMN05717243	GCA_001915925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/925/GCA_001915925.1_ASM191592v1	27819664	-
Acinetobacter sp. WCHA45	2004644	PRJNA387062	387062	Proteobacteria	Gammaproteobacteria	3.01782	39.1	-	NHRL01	117	2963	2708	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN07138955	GCA_002165255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/255/GCA_002165255.1_ASM216525v1	-	WCHA45
Bacillus sp. 7705b	2028568	PRJNA395369	395369	Terrabacteria group	Firmicutes	4.13106	43.6	-	NSDH01	82	4246	4074	9/11/17	9/13/17	Contig	Bielefeld University	SAMN07503242	GCA_002289525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/525/GCA_002289525.1_ASM228952v1	-	7705b
Streptomyces sp. NRRL B-1322	1463828	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.35194	72.4	-	JOHF01	146	7602	7286	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645474	GCA_000719625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/625/GCA_000719625.1_ASM71962v1	-	NRRL B-1322
Pseudomonas sp. 250J	1478142	PRJNA242391	242391	Proteobacteria	Gammaproteobacteria	5.90559	64.7	-	JHEE01	219	5382	5142	8/6/15	4/11/17	Contig	EEZ-CSIC	SAMN02693653	GCA_001259595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/595/GCA_001259595.1_ASM125959v1	25403737	250J
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.98524	55.2	-	LPPW01	57	4948	4726	12/21/15	3/27/17	Contig	JCVI	SAMN04252912	GCA_001472375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/375/GCA_001472375.1_SMART_530.v1	-	SMART_530
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.44494	67.5	-	LPGI01	114	6770	6441	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449508	GCA_001530745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/745/GCA_001530745.1_ASM153074v1	-	MSMB1561WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.10061	64.3	-	FVBK01	39	5073	4939	3/10/17	3/18/17	Contig	SC	SAMEA2071295	GCA_900130935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/935/GCA_900130935.1_10665_3_47	-	217
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.83506	55.2	-	JWBJ01	309	4781	4553	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197103	GCA_001052225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/225/GCA_001052225.1_ASM105222v1	26230489	1147_ECLO
Staphylococcus haemolyticus	1283	PRJNA259933	259933	Terrabacteria group	Firmicutes	2.48489	32.6	-	JRAW01	199	2400	2223	8/15/16	8/15/16	Contig	Research Institute of Physical-Chemical Medicine	SAMN03014694	GCA_001705245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/245/GCA_001705245.1_ASM170524v1	-	39
Campylobacter coli CVM 41944	1440013	PRJNA232272	232272	Proteobacteria	delta/epsilon subdivisions	1.68386	31.4	-	JAJO01	55	1740	1627	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887117	GCA_001419265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/265/GCA_001419265.1_Campylobacter_coli_CVM_41944_v1.0	-	CVM 41944
Lactobacillus plantarum	1590	PRJNA327377	327377	Terrabacteria group	Firmicutes	3.16869	44.5	-	MQNL01	58	3170	2831	6/2/17	6/5/17	Contig	University of Turin	SAMN05332112	GCA_002165725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/725/GCA_002165725.1_ASM216572v1	-	S11T3E
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.16826	59.9	-	FCMF01	15	4935	4764	1/21/16	3/27/17	Scaffold	SC	SAMEA2273971	GCA_001537505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/505/GCA_001537505.1_12082_5_35	-	2880STDY5682898
Yersinia enterocolitica	630	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	4.69066	46.8	-	CGGL01	159	4496	4050	3/15/15	3/27/17	Scaffold	SC	SAMEA1486282	GCA_001354555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/555/GCA_001354555.1_8016_2_81	-	IP26042
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.46001	53.6	-	NBNL01	35	2398	2206	6/30/17	7/3/17	Contig	Institute for Medical Research	SAMN06311213	GCA_002213075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/075/GCA_002213075.1_ASM221307v1	-	c326
Clostridium tyrobutyricum	1519	PRJNA308866	308866	Terrabacteria group	Firmicutes	3.13444	31.0298	chromosome:NZ_CP014170.1/CP014170.1; plasmid pCTK01:NZ_CP014171.1/CP014171.1	-	2	3120	2980	5/12/16	4/5/17	Complete Genome	KAIST	SAMN04415495	GCA_001642655.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/655/GCA_001642655.1_ASM164265v1	27302759	KCTC 5387
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15211	41.2	-	CWED01	83	2078	1909	6/23/15	3/26/17	Contig	SC	SAMEA1032960	GCA_001178285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/285/GCA_001178285.1_6903_7_44	-	EQUI0191
Enterococcus faecium EnGen0155	1157450	PRJNA88329	88329	Terrabacteria group	Firmicutes	2.62218	38.3	-	AIUC01	8	2652	2425	5/3/13	3/24/17	Scaffold	Broad Institute	SAMN00808981	GCA_000392255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/255/GCA_000392255.1_Ente_faec_KH36syn_V1	-	KH36syn
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14041	52.4	-	CQJV01	84	2506	2184	3/22/15	4/11/17	Contig	SC	SAMEA1690419	GCA_001150325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/325/GCA_001150325.1_8289_2_63	-	GCGS063
Streptococcus mutans	1309	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.02615	36.7	-	JWGO01	62	2025	1915	7/10/15	3/26/17	Contig	University of Washington	SAMN03196968	GCA_001068415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/415/GCA_001068415.1_ASM106841v1	26230489	1006_SMUT
Enterococcus faecalis EnGen0337	1169296	PRJNA157763	157763	Terrabacteria group	Firmicutes	2.92663	37.5	-	ASDK01	5	2956	2821	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847612	GCA_000393075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/075/GCA_000393075.1_Ente_faec_T18_V1	-	T18
Clostridium botulinum	1491	PRJNA353866	353866	Terrabacteria group	Firmicutes	4.04319	28	-	MWIW01	39	3976	3752	4/21/17	7/29/17	Contig	Northern Arizona University	SAMN06022737	GCA_002103805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/805/GCA_002103805.1_ASM210380v1	28733282	SU0305
Klebsiella pneumoniae UCICRE 7	1328393	PRJNA201990	201990	Proteobacteria	Gammaproteobacteria	5.49487	57.1	-	AYII01	6	5541	5274	10/30/13	2/21/17	Scaffold	Broad Institute	SAMN02138612	GCA_000492535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/535/GCA_000492535.1_Kleb_pneu_UCI_7_V1	-	UCICRE 7
Bacillus subtilis subsp. spizizenii JCM 2499	1300158	PRJDB894	243772	Terrabacteria group	Firmicutes	3.97537	43.8	-	BBEN01	31	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016832	GCA_001312785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/785/GCA_001312785.1_ASM131278v1	-	JCM 2499
Vibrio parahaemolyticus S105	1394641	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.12542	45.1	-	AWJT01	791	5055	4599	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338955	GCA_000490315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/315/GCA_000490315.1_S105	-	S105
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.91736	38.1	-	MLOZ01	281	1958	1717	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297117	GCA_001869685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/685/GCA_001869685.1_ASM186968v1	27118061	AWRIB821
Brucella abortus 89-2646-1238	1341673	PRJNA217061	217061	Proteobacteria	Alphaproteobacteria	3.2861	57.2	-	AXNA01	4	3369	3150	10/24/13	3/24/17	Contig	Broad Institute	SAMN02334515	GCA_000480175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/175/GCA_000480175.1_Bruc_abor_89-2646-1238_V1	-	89-2646-1238
Clostridioides difficile Y10	1151373	PRJNA85921	85921	Terrabacteria group	Firmicutes	4.06292	28.2	-	AVKR01	37	3772	3623	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766735	GCA_000450825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/825/GCA_000450825.2_ASM45082v2	-	Y10
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	4.03212	47.4	-	LBGH01	65	3877	3670	10/22/15	3/27/17	Scaffold	University of Alberta	SAMN03488017	GCA_001402255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/255/GCA_001402255.1_ASM140225v1	26454015	YB4G06
Bacillus thuringiensis	1428	PRJNA349211	349211	Terrabacteria group	Firmicutes	7.03936	34.8	-	NFEN01	261	7500	6947	5/17/17	6/15/17	Scaffold	Huazhong Agricultural University	SAMN05934565	GCA_002147555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/555/GCA_002147555.1_ASM214755v1	-	I13
Burkholderia pseudomallei BCC215	441152	PRJNA19491	19491	Proteobacteria	Betaproteobacteria	7.00041	68	-	ABBR01	1030	7496	6486	6/6/07	5/18/17	Contig	NMRC	SAMN02470671	GCA_000170595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/595/GCA_000170595.1_ASM17059v1	-	BCC215
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.56148	67.2	-	MUSO01	115	8125	7621	2/10/17	4/2/17	Contig	University of British Columbia	SAMN05001880	GCA_001993635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/635/GCA_001993635.1_ASM199363v1	-	VC14165
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.50995	50.7	-	FTWH01	374	5024	4261	1/28/17	2/26/17	Contig	SC	SAMEA2054653	GCA_900158595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/595/GCA_900158595.1_9803_4_59	-	2090STDY5461877
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.54258	38.3	-	FJLL01	66	3238	3090	2/20/16	3/27/17	Contig	SC	SAMEA2065106	GCA_900051015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/015/GCA_900051015.1_10771_3_74	-	2531STDY5467451
Pseudomonas syringae	317	PRJEB17468	351684	Proteobacteria	Gammaproteobacteria	5.90104	58.8	-	FOTU01	69	5500	5128	10/31/16	3/28/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444064	GCA_900114665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/665/GCA_900114665.1_IMG-taxon_2687453748_annotated_assembly	-	BS2732
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.17058	41.4	-	CEKF01	88	2127	1986	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234094	GCA_000940175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/175/GCA_000940175.1_Velvet_assembly	-	S97X
Streptococcus agalactiae GB00548	1154918	PRJNA86509	86509	Terrabacteria group	Firmicutes	2.03595	35.3	-	ALTM01	16	2089	1984	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN01091759	GCA_000290195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/195/GCA_000290195.1_ASM29019v1	-	GB00548
Acinetobacter baumannii	470	PRJNA392249	392249	Proteobacteria	Gammaproteobacteria	3.87756	38.9	-	NKKP01	248	3792	3558	8/10/17	8/12/17	Scaffold	Universidade Federal de Uberlandia	SAMN07286190	GCA_002245665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/665/GCA_002245665.1_ASM224566v1	-	15
Pseudomonas aeruginosa BWHPSA028	1402528	PRJNA219889	219889	Proteobacteria	Gammaproteobacteria	7.47831	65.2	-	AXQA01	14	7218	6978	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360700	GCA_000481145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/145/GCA_000481145.1_Pseu_aeru_BWH028_V1	-	BWHPSA028
Shigella flexneri	623	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.09959	50.9	-	MSKG02	297	4425	3876	1/4/17	3/4/17	Scaffold	University of California at Davis	SAMN03358418	GCA_001933255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/933/255/GCA_001933255.2_ASM193325v2	-	BCW_4882
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.9172	35.1	-	JQPA01	374	4561	4099	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949579	GCA_001568645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/645/GCA_001568645.1_ASM156864v1	26833181	J9
Streptococcus pyogenes ABC020046158	1439137	PRJNA232994	232994	Terrabacteria group	Firmicutes	1.89838	38.3	-	JJJB01	8	1921	1793	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567343	GCA_000631725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/725/GCA_000631725.1_Stre_pyog_ABC020046158_V1	-	ABC020046158
Neisseria meningitidis NM762	1095687	PRJNA76305	76305	Proteobacteria	Betaproteobacteria	2.19162	51.7	-	ANRM01	22	2542	2165	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055168	GCA_000327905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/905/GCA_000327905.2_ASM32790v2	-	NM762
Helicobacter pylori HP250BFiV	1159074	PRJNA89319	89319	Proteobacteria	delta/epsilon subdivisions	1.58114	39.4	-	APEW01	45	1563	1403	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436782	GCA_000345905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/905/GCA_000345905.2_ASM34590v2	-	HP250BFiV
Streptococcus pneumoniae GA11856	760766	PRJNA48689	48689	Terrabacteria group	Firmicutes	2.04497	39.8	-	AIJV01	27	2238	1963	3/7/12	3/8/17	Contig	Institute for Genome Sciences	SAMN00630314	GCA_000251405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/405/GCA_000251405.2_ASM25140v2	-	GA11856
Flavobacterium columnare	996	PRJNA311731	311731	FCB group	Bacteroidetes/Chlorobi group	3.32912	31	chromosome:NZ_CP015107.1/CP015107.1	-	1	2896	2694	5/10/16	4/5/17	Complete Genome	University of Wisconsin - Milwaukee	SAMN04487986	GCA_001641185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/185/GCA_001641185.1_ASM164118v1	27340080	C#2
Mycobacterium tuberculosis PanR0803	1352588	PRJNA210065	210065	Terrabacteria group	Actinobacteria	4.40637	65.5498	chromosome:NZ_CM002108.1/CM002108.1	ATSH01	1	4271	4079	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471062	GCA_000445735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/735/GCA_000445735.1_fedora0803c_IS	23884993	PanR0803
Mycobacterium avium subsp. paratuberculosis	1770	PRJNA389670	389670	Terrabacteria group	Actinobacteria	4.85027	69.1	-	NKRI01	6	4614	4295	7/25/17	8/1/17	Scaffold	"Friedrich-Loeffler-Institut, Institute of Molecular Pathogenesis"	SAMN07204620	GCA_002232005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/005/GCA_002232005.1_ASM223200v1	26384038	JIII-386
Bacillus cereus BAG2O-2	1053177	PRJNA70319	70319	Terrabacteria group	Firmicutes	5.89103	35.1	-	AHCX01	5	6213	5815	6/19/13	3/24/17	Scaffold	Broad Institute	SAMN02596809	GCA_000412315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/315/GCA_000412315.1_Baci_cere_BAG2O-2_G13185_V1	-	BAG2O-2
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.71379	31.9	-	LWAS01	72	2765	2625	4/15/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04542846	GCA_001622555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/555/GCA_001622555.1_ASM162255v1	-	LRKNS009
Listeria monocytogenes	1639	PRJNA276787	276787	Terrabacteria group	Firmicutes	3.02266	37.9	-	JZBQ01	32	3051	2961	3/23/15	2/27/17	Scaffold	University of Veterinary Medicine Vienna	SAMN03380816	GCA_000960815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/815/GCA_000960815.1_ASM96081v1	-	8KSM
Yersinia pestis INS	1159617	PRJNA169908	169908	Proteobacteria	Gammaproteobacteria	4.6517	47.6	-	AMQL01	18	4397	4208	11/9/12	3/23/17	Contig	Instituto Nacional de Salud	SAMN02403946	GCA_000311885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/885/GCA_000311885.1_ASM31188v1	23469360	INS
Campylobacter jejuni subsp. jejuni 84-25	360110	PRJNA16367	16367	Proteobacteria	delta/epsilon subdivisions	1.67162	30.4	-	AANT02	5	1762	1653	2/2/06	3/15/17	Contig	TIGR	SAMN02435873	GCA_000168195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/195/GCA_000168195.1_ASM16819v1	-	84-25
Candidatus Kinetoplastibacterium crithidii TCC036E	1208918	PRJNA169066	169066	Proteobacteria	Betaproteobacteria	0.82193	31	chromosome:NC_020283.1/CP003804.1	-	1	789	731	2/19/13	4/8/17	Complete Genome	VCU	SAMN02641642	GCA_000340825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/825/GCA_000340825.1_ASM34082v1	23345457	TCC036E
Staphylococcus aureus	1280	PRJDB4003	381589	Terrabacteria group	Firmicutes	2.78509	32.8666	chromosome:AP015012.1; plasmid pno10:AP015013.1	-	2	2683	2605	6/1/17	9/22/17	Chromosome	"Department of Bacteriology, Hiroshima University Graduate School of Biomedical & Health Sciences"	SAMD00041597	GCA_002356655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/655/GCA_002356655.1_ASM235665v1	-	No.10
Staphylococcus aureus	1280	PRJNA316797	316797	Terrabacteria group	Firmicutes	3.1247	33	chromosome:CP023560.1	-	1	-	-	10/2/17	10/2/17	Chromosome	"Laboratory of Medical Microbiology, University of Antwerpen"	SAMN04621062	GCA_002407105.1	-	-	-	NMR08
Candidatus Kinetoplastibacterium crithidii (ex Angomonas deanei ATCC 30255)	1267577	PRJNA168418	168418	Proteobacteria	Betaproteobacteria	0.821813	31	chromosome:NC_019815.1/CP003978.1	-	1	789	702	12/11/12	4/8/17	Complete Genome	LNCC	SAMN02641519	GCA_000319225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/225/GCA_000319225.1_ASM31922v1	23560078	-
Campylobacter jejuni subsp. jejuni P110B	885273	PRJNA52015	52015	Proteobacteria	delta/epsilon subdivisions	1.65634	30.6	-	AEIO01	29	1715	1599	1/11/12	3/15/17	Contig	"Institute of Veterinary, Animal and Biomedical Sciences,  Massey University"	SAMN00113350	GCA_000242375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/375/GCA_000242375.2_ASM24237v2	22096527	P110B
Yersinia pestis 12	755859	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.36877	48	-	ADOV01	1092	4149	3842	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02402991	GCA_000320425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/320/425/GCA_000320425.1_ASM32042v1	23271803	12
Listeria monocytogenes	1639	PRJNA274656	274656	Terrabacteria group	Firmicutes	3.06432	37.8	-	JYJO01	12	3148	3048	4/7/15	2/27/17	Scaffold	University of Veterinary Medicine Vienna	SAMN03329628	GCA_000970525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/525/GCA_000970525.1_ASM97052v1	-	3253
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.39954	32.2	-	LWAT01	72	2415	2306	4/15/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04542849	GCA_001622575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/575/GCA_001622575.1_ASM162257v1	-	LRKNS014
Bacillus cereus BAG1O-3	1053169	PRJNA70303	70303	Terrabacteria group	Firmicutes	5.85119	35	-	AHCP01	9	6099	5794	6/19/13	3/24/17	Scaffold	Broad Institute	SAMN02596801	GCA_000412975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/975/GCA_000412975.1_Baci_cere_BAG1O-3_G13160_V1	-	BAG1O-3
Mycobacterium avium subsp. hominissuis	439334	PRJNA329424	329424	Terrabacteria group	Actinobacteria	5.05853	69.1	-	MBFP01	256	4920	4569	9/15/17	9/18/17	Scaffold	Kobe Institute of Health	SAMN05412759	GCA_002304055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/055/GCA_002304055.1_ASM230405v1	28957464	CAM78
Mycobacterium tuberculosis PanR0804	1352589	PRJNA210066	210066	Terrabacteria group	Actinobacteria	4.40227	65.3995	chromosome:NZ_CM002110.1/CM002110.1	ATSI01	1	4306	4058	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471053	GCA_000445755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/755/GCA_000445755.1_fedora0804_IS	23884993	PanR0804
Rickettsia canadensis str. CA410	1105107	PRJNA75029	75029	Proteobacteria	Alphaproteobacteria	1.15023	31	chromosome:NC_016929.1/CP003304.1	-	1	1117	900	2/17/12	4/7/17	Complete Genome	Los Alamos National Laboratory	SAMN02603555	GCA_000283915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/915/GCA_000283915.1_ASM28391v1	-	CA410
Streptococcus pneumoniae GA13430	760770	PRJNA48697	48697	Terrabacteria group	Firmicutes	2.18623	39.5	-	AIKP01	10	2371	2092	3/7/12	3/8/17	Contig	Institute for Genome Sciences	SAMN00690871	GCA_000251445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/445/GCA_000251445.2_ASM25144v2	-	GA13430
Helicobacter pylori HP250BSi	1159075	PRJNA89321	89321	Proteobacteria	delta/epsilon subdivisions	1.57824	39.4	-	APEX01	48	1560	1395	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436922	GCA_000345925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/925/GCA_000345925.2_ASM34592v2	-	HP250BSi
Neisseria meningitidis NM586	1095688	PRJNA76307	76307	Proteobacteria	Betaproteobacteria	2.22725	51.6	-	ANRL01	25	2615	2213	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055169	GCA_000327925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/925/GCA_000327925.2_ASM32792v2	-	NM586
Streptococcus pyogenes ABC020064181	1439314	PRJNA232993	232993	Terrabacteria group	Firmicutes	1.82839	38.5	-	JJJC01	6	1849	1730	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567342	GCA_000631745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/745/GCA_000631745.1_Stre_pyog_ABC020064181_V1	-	ABC020064181
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.82639	35	-	JQPF01	344	4436	3984	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949535	GCA_001568655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/655/GCA_001568655.1_ASM156865v1	26833181	56619
Shigella flexneri	623	PRJNA362675	362675	Proteobacteria	Gammaproteobacteria	4.59234	50.5	-	MTPK01	345	5229	4415	5/22/17	5/24/17	Scaffold	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN06245867	GCA_002154165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/165/GCA_002154165.1_ASM215416v1	-	SP1
Pseudomonas aeruginosa BWHPSA027	1402527	PRJNA219888	219888	Proteobacteria	Gammaproteobacteria	6.88202	66	-	AXQB01	8	6584	6411	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360699	GCA_000481165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/165/GCA_000481165.1_Pseu_aeru_BWH027_V1	-	BWHPSA027
Acinetobacter baumannii AB900	557601	PRJNA30995	30995	Proteobacteria	Gammaproteobacteria	3.91088	38.9	-	ABXK01	68	3743	3593	12/5/08	3/15/17	Contig	"Infectious Disease and Genomics Laboratory, Center of Excellence in Bioinformatics and Life Sciences, SUNY-Buffalo"	SAMN02471436	GCA_000173395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/395/GCA_000173395.1_ASM17339v1	18931120	AB900
Streptococcus agalactiae GB00891	1154938	PRJNA86549	86549	Terrabacteria group	Firmicutes	2.03105	35.3	-	ALUG01	35	2084	1939	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991405	GCA_000290215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/215/GCA_000290215.1_ASM29021v1	-	GB00891
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.11669	41.2	-	CEHN01	129	2138	1999	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233955	GCA_000940275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/275/GCA_000940275.1_Velvet_assembly	-	LS8X
Pseudomonas syringae	317	PRJEB17212	351398	Proteobacteria	Gammaproteobacteria	6.25063	58.8	-	FOWH01	93	5723	5383	10/31/16	3/28/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444063	GCA_900115405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/405/GCA_900115405.1_IMG-taxon_2693429914_annotated_assembly	-	BS3825
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.6294	38.3	-	FJLR01	35	3345	3213	2/20/16	3/27/17	Contig	SC	SAMEA2080794	GCA_900051025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/025/GCA_900051025.1_10625_3_65	-	2532STDY5467634
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.48671	50.8	-	FTWI01	368	5031	4257	1/28/17	3/2/17	Contig	SC	SAMEA2054657	GCA_900158635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/635/GCA_900158635.1_9803_4_63	-	2090STDY5461881
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.73814	67	-	MUUI01	302	7503	6956	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001939	GCA_001993645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/645/GCA_001993645.1_ASM199364v1	-	VC6456
Burkholderia pseudomallei 576	557724	PRJNA31091	31091	Proteobacteria	Betaproteobacteria	7.24674	68.1	-	ACCE01	21	7452	6895	12/12/08	5/18/17	Contig	Los Alamos National Laboratory	SAMN02470264	GCA_000182195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/182/195/GCA_000182195.1_ASM18219v1	-	576
Bacillus thuringiensis serovar aizawai	1433	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.82347	35	-	NFET01	52	6142	5749	5/17/17	5/24/17	Scaffold	Huazhong Agricultural University	SAMN05934571	GCA_002147655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/655/GCA_002147655.1_ASM214765v1	-	T07151
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.88641	47.7	-	LBGF01	50	3611	3458	10/22/15	3/27/17	Scaffold	University of Alberta	SAMN03488015	GCA_001402265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/265/GCA_001402265.1_ASM140226v1	26454015	YB4F05
Clostridioides difficile Y21	1151374	PRJNA85923	85923	Terrabacteria group	Firmicutes	4.07911	28.4	-	AVKS01	225	3840	3642	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766741	GCA_000450845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/845/GCA_000450845.2_ASM45084v2	-	Y21
Brucella abortus bv. 4 str. 292	520452	PRJNA243889	243889	Proteobacteria	Alphaproteobacteria	3.26274	57.2	-	JMSB01	43	3359	3150	8/19/14	3/24/17	Contig	Los Alamos National Laboratory	SAMN02767940	GCA_000742275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/275/GCA_000742275.1_ASM74227v1	25237024	292
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.87138	37.9	-	MLPA01	258	1977	1692	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297118	GCA_001869695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/695/GCA_001869695.1_ASM186969v1	27118061	AWRIB845
Vibrio parahaemolyticus S104	1394640	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.17453	45.2	-	AWJU01	719	4928	4697	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338954	GCA_000490335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/335/GCA_000490335.1_S104	-	S104
Bacillus subtilis	1423	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.80041	43.8	-	DBCU01	6	-	-	9/12/17	9/15/17	Contig	University of Queensland	SAMN06451663	GCA_002293225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/225/GCA_002293225.1_ASM229322v1	28894102	-
Klebsiella pneumoniae UCICRE 6	1328392	PRJNA201989	201989	Proteobacteria	Gammaproteobacteria	5.47641	57.2	-	AYIJ01	3	5384	5130	10/30/13	2/21/17	Scaffold	Broad Institute	SAMN02138611	GCA_000492555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/555/GCA_000492555.1_Kleb_pneu_UCI_6_V1	-	UCICRE 6
Clostridium botulinum	1491	PRJNA353866	353866	Terrabacteria group	Firmicutes	4.07952	27.9	-	MWIY01	35	4022	3745	4/21/17	7/29/17	Contig	Northern Arizona University	SAMN06022739	GCA_002103825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/825/GCA_002103825.1_ASM210382v1	28733282	SU0632
Enterococcus faecalis EnGen0365	1169297	PRJNA157765	157765	Terrabacteria group	Firmicutes	3.08631	37.6	-	ASDL01	11	3132	2922	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847613	GCA_000393095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/095/GCA_000393095.1_Ente_faec_F1_V1	-	F1
Streptococcus mutans	1309	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.03597	36.8	-	JWGS01	49	2029	1910	7/10/15	3/26/17	Contig	University of Washington	SAMN03196964	GCA_001069835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/835/GCA_001069835.1_ASM106983v1	26230489	1002_SMUT
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14855	52.4	-	CQKG01	75	2517	2200	3/23/15	4/11/17	Contig	SC	SAMEA1690397	GCA_001150905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/905/GCA_001150905.1_8289_2_58	-	GCGS058
Enterococcus faecium EnGen0153	1157448	PRJNA88325	88325	Terrabacteria group	Firmicutes	2.82383	38.2	-	AIUA01	27	2921	2642	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808978	GCA_000392315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/315/GCA_000392315.1_Ente_faec_HM1074_V1	-	HM1074
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12774	41.2	-	CVZO01	69	2059	1884	6/23/15	3/26/17	Contig	SC	SAMEA1032961	GCA_001178305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/305/GCA_001178305.1_6903_2_22	-	EQUI0071
Methanobrevibacter smithii ATCC 35061	420247	PRJNA18653	18653	Euryarchaeota	Methanobacteria	1.85316	31	chromosome:NC_009515.1/CP000678.1	-	1	1793	1710	6/4/07	3/30/17	Complete Genome	Washington University Center for Genome Sciences	SAMN02604313	GCA_000016525.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/525/GCA_000016525.1_ASM1652v1	17563350	ATCC 35061; PS; DSMZ 861
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.4457	53.6	-	NBNM01	35	2355	2181	6/30/17	7/3/17	Contig	Institute for Medical Research	SAMN06311210	GCA_002213115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/115/GCA_002213115.1_ASM221311v1	-	c198
Yersinia enterocolitica	630	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	4.3742	46.9	-	CHYU01	110	4091	3843	4/21/15	3/27/17	Scaffold	SC	SAMEA1486383	GCA_001354595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/595/GCA_001354595.1_8016_2_71	-	IP10393
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.33785	59.9	-	FCFZ01	27	5102	4938	1/21/16	3/27/17	Scaffold	SC	SAMEA2273889	GCA_001537525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/525/GCA_001537525.1_12082_2_25	-	2880STDY5682816
Lactobacillus plantarum	1590	PRJNA310044	310044	Terrabacteria group	Firmicutes	3.36858	44.3	-	LRUO01	66	3360	3084	8/11/17	8/15/17	Contig	RMIT University	SAMN04445749	GCA_002249825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/825/GCA_002249825.1_ASM224982v1	-	A6
Campylobacter coli CVM 41945	1440014	PRJNA232273	232273	Proteobacteria	delta/epsilon subdivisions	1.71127	31.4	-	JAJP01	38	1795	1696	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887118	GCA_001419275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/275/GCA_001419275.1_Campylobacter_coli_CVM_41945_v1.0	-	CVM 41945
Staphylococcus haemolyticus	1283	PRJNA267549	267549	Terrabacteria group	Firmicutes	7.08819	44.4	-	JWDI01	516	-	-	7/10/15	7/13/16	Scaffold	University of Washington	SAMN03197052	GCA_001068645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/645/GCA_001068645.1_ASM106864v1	26230489	109_SHAE
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.71607	55.7	-	JWAU01	53	4557	4397	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197118	GCA_001052295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/295/GCA_001052295.1_ASM105229v1	26230489	1161_ECLO
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21115	64.1	-	FVAY01	12	5328	5149	3/10/17	3/18/17	Contig	SC	SAMEA1971196	GCA_900130945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/945/GCA_900130945.1_10665_3_49	-	219
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.52702	67.3	-	LPFO01	114	6816	6453	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449488	GCA_001530755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/755/GCA_001530755.1_ASM153075v1	-	MSMB1489WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.15567	55	-	LPPV01	97	5110	4864	12/21/15	3/27/17	Contig	JCVI	SAMN04252913	GCA_001472385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/385/GCA_001472385.1_SMART_539.v1	-	SMART_539
Pseudomonas sp. CMR5c	658630	PRJNA290438	290438	Proteobacteria	Gammaproteobacteria	6.75558	63.6	-	LHUY01	44	6225	6070	8/18/15	4/16/17	Contig	JLU	SAMN03891662	GCA_001269545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/545/GCA_001269545.1_ASM126954v1	-	CMR5c
Streptomyces sp. NRRL B-1381	1463829	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.05492	72.5	-	JOHG01	146	7006	6652	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645475	GCA_000719655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/655/GCA_000719655.1_ASM71965v1	-	NRRL B-1381
Bacillus sp. RRD69	1855345	PRJEB18881	360768	Terrabacteria group	Firmicutes	3.71484	41.4	-	FTPN01	5	3863	3698	1/19/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216491	GCA_900156275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/275/GCA_900156275.1_IMG-taxon_2681812863_annotated_assembly	-	RRD69
Acinetobacter sp. WCHA52	2004647	PRJNA387062	387062	Proteobacteria	Gammaproteobacteria	3.57969	42.4	-	NHRO01	34	3446	3320	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN07138952	GCA_002165295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/295/GCA_002165295.1_ASM216529v1	-	WCHA52
Clostridium sp. CAG:349_48_7	1896988	PRJNA321218	321218	Terrabacteria group	Firmicutes	0.707803	47.5	-	MNRM01	134	842	506	12/23/16	12/23/16	Scaffold	None	SAMN05717244	GCA_001915935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/935/GCA_001915935.1_ASM191593v1	27819664	-
Staphylococcus sp. HMSC57A07	1608877	PRJNA274529	274529	Terrabacteria group	Firmicutes	2.79149	32.6	-	LTMK01	76	2907	2788	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498870	GCA_001839025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/025/GCA_001839025.1_ASM183902v1	-	HMSC57A07
Prevotella sp. UBA4341	1947161	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	1.93456	54.5	-	DGTH01	194	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453422	GCA_002393705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/705/GCA_002393705.1_ASM239370v1	28894102	-
Mycobacterium sp. D17A2	1855661	PRJNA323571	323571	Terrabacteria group	Actinobacteria	5.19564	64	-	MAFB01	59	5188	4926	3/3/17	3/6/17	Contig	LNCC	SAMN05186782	GCA_002013425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/425/GCA_002013425.1_ASM201342v1	-	D17A2
Mycobacterium sp. D16R12	1855662	PRJNA323571	323571	Terrabacteria group	Actinobacteria	4.80729	64.2	-	MAFC01	41	4654	4514	3/3/17	3/6/17	Contig	LNCC	SAMN05186783	GCA_002013465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/465/GCA_002013465.1_ASM201346v1	-	D16R12
Prevotella sp. UBA4339	1947160	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.89379	48.7	-	DGTJ01	135	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452807	GCA_002393725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/393/725/GCA_002393725.1_ASM239372v1	28894102	-
Staphylococcus sp. HMSC57B03	1608878	PRJNA274530	274530	Terrabacteria group	Firmicutes	2.83661	32.6	-	LTMJ01	78	2975	2862	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498880	GCA_001839035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/035/GCA_001839035.1_ASM183903v1	-	HMSC57B03
Clostridium sp. CAG:217_53_7	1896992	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.47454	53.5	-	MNRN01	224	1681	1115	12/23/16	12/23/16	Scaffold	None	SAMN05717245	GCA_001915975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/975/GCA_001915975.1_ASM191597v1	27819664	-
Acinetobacter sp. WCHA55	2004646	PRJNA387062	387062	Proteobacteria	Gammaproteobacteria	3.85209	41.1	-	NHRN01	116	3713	3495	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN07138953	GCA_002165305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/305/GCA_002165305.1_ASM216530v1	-	WCHA55
Bacillus sp. JKS001846	1938743	PRJEB20337	382101	Terrabacteria group	Firmicutes	5.96067	35	-	FWYG01	2	6303	5831	4/8/17	4/17/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06272738	GCA_900176455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/455/GCA_900176455.1_IMG-taxon_2703719265_annotated_assembly	-	JKS001846
Streptomyces sp. NRRL F-5555	1463863	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.94302	72.5	-	JOHJ01	183	7102	6712	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645478	GCA_000719665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/665/GCA_000719665.1_ASM71966v1	-	NRRL F-5555
Pseudomonas sp. P97.38	255451	PRJNA290438	290438	Proteobacteria	Gammaproteobacteria	6.05509	62.4	-	LHVJ01	36	5437	5274	8/18/15	4/16/17	Contig	JLU	SAMN03891676	GCA_001269745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/745/GCA_001269745.1_ASM126974v1	-	P97.38
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.9607	55.3	-	LPPT01	78	4909	4654	12/21/15	3/27/17	Contig	JCVI	SAMN04252915	GCA_001472435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/435/GCA_001472435.1_SMART_557.v1	-	SMART_557
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.77521	67	-	LPGM01	115	7129	6697	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449512	GCA_001530825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/825/GCA_001530825.1_ASM153082v1	-	MSMB1629WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.27388	64.2	-	FRZP01	33	5287	5137	12/14/16	3/21/17	Contig	SC	SAMEA2068669	GCA_900130955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/955/GCA_900130955.1_10665_3_46	-	216
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.56644	57.2	-	JWGW01	229	5496	5230	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03196960	GCA_001052595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/595/GCA_001052595.1_ASM105259v1	26230489	10_ECLO
Staphylococcus haemolyticus	1283	PRJNA267549	267549	Terrabacteria group	Firmicutes	5.56707	32.2	-	JUPE01	386	-	-	7/10/15	7/13/16	Scaffold	University of Washington	SAMN03198096	GCA_001075215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/215/GCA_001075215.1_ASM107521v1	26230489	89_SHAE
Campylobacter coli CVM 41953	1440015	PRJNA232274	232274	Proteobacteria	delta/epsilon subdivisions	1.77435	31.2	-	JAJQ01	141	1894	1694	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887119	GCA_001419325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/325/GCA_001419325.1_Campylobacter_coli_CVM_41953_v1.0	-	CVM 41953
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.36869	59.7	-	FCFC01	19	5088	4927	1/21/16	3/27/17	Scaffold	SC	SAMEA2273983	GCA_001537545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/545/GCA_001537545.1_12082_3_18	-	2880STDY5682911
Yersinia enterocolitica	630	PRJEB2879	204483	Proteobacteria	Gammaproteobacteria	4.49069	46.9	-	CGBC01	137	4265	3980	3/15/15	3/27/17	Scaffold	SC	SAMEA1486413	GCA_001354615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/615/GCA_001354615.1_8016_2_73	-	IP26656
Corynebacterium diphtheriae	1717	PRJNA345527	345527	Terrabacteria group	Actinobacteria	2.43733	53.6	-	NBNK01	39	2368	2181	6/30/17	7/3/17	Contig	Institute for Medical Research	SAMN06311221	GCA_002213145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/145/GCA_002213145.1_ASM221314v1	-	rz659
Campylobacter coli	195	PRJNA338270	338270	Proteobacteria	delta/epsilon subdivisions	1.98538	30.9554	chromosome:NZ_CP017025.1/CP017025.1; plasmid pCC14983A-1:NZ_CP017026.1/CP017026.1; plasmid pCC14983A-2:NZ_CP017027.1/CP017027.1; plasmid pCC14983A-3:NZ_CP017028.1/CP017028.1	-	4	2101	1973	8/31/16	3/20/17	Complete Genome	"USDA, ARS, WRRC"	SAMN05544801	GCA_001717605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/605/GCA_001717605.1_ASM171760v1	-	14983A
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.1274	41.2	-	CWCY01	78	2058	1875	6/24/15	3/26/17	Contig	SC	SAMEA1032962	GCA_001178325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/325/GCA_001178325.1_6903_6_21	-	EQUI0166
Enterococcus faecium EnGen0372	1169278	PRJNA157797	157797	Terrabacteria group	Firmicutes	2.83424	37.9	-	ASEB01	10	2837	2649	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847629	GCA_000393415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/415/GCA_000393415.1_Ente_faec_VAN_476_V1	-	VAN 476
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.15028	52.4	-	CQJQ01	75	2514	2187	3/22/15	4/11/17	Contig	SC	SAMEA1690336	GCA_001151205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/205/GCA_001151205.1_8727_8_69	-	GCGS165
Streptococcus mutans	1309	PRJNA309131	309131	Terrabacteria group	Firmicutes	2.05019	36.6	-	LTAK01	24	2067	1932	4/20/16	4/10/17	Contig	Texas A&M	SAMN04420782	GCA_001625005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/625/005/GCA_001625005.1_ASM162500v1	27257196	ATCC 55676
Enterococcus faecalis EnGen0342	1169298	PRJNA157767	157767	Terrabacteria group	Firmicutes	3.00797	37.5	-	ASDM01	9	3044	2869	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847614	GCA_000393115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/115/GCA_000393115.1_Ente_faec_SS-7_V1	-	SS-7
Clostridium botulinum	1491	PRJNA353866	353866	Terrabacteria group	Firmicutes	3.97267	28	-	MWIX01	32	3803	3575	4/21/17	7/29/17	Contig	Northern Arizona University	SAMN06022738	GCA_002103855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/855/GCA_002103855.1_ASM210385v1	28733282	SU1297
Klebsiella pneumoniae UCICRE 4	1328391	PRJNA201987	201987	Proteobacteria	Gammaproteobacteria	5.54844	57.2	-	AYIL01	3	5539	5276	10/30/13	2/21/17	Scaffold	Broad Institute	SAMN02138609	GCA_000492595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/595/GCA_000492595.1_Kleb_pneu_UCI_4_V1	-	UCICRE 4
Bacillus subtilis	1423	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.79381	43.6	-	DCNL01	24	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451716	GCA_002322735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/735/GCA_002322735.1_ASM232273v1	28894102	-
Vibrio parahaemolyticus S101	1394639	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.01117	45.3	-	AWJV01	595	4749	4539	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338953	GCA_000490355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/355/GCA_000490355.1_S101	-	S101
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.88523	37.8	-	MLPB01	217	1946	1696	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297119	GCA_001869725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/725/GCA_001869725.1_ASM186972v1	27118061	AWRIB847
Brucella abortus	235	PRJNA291474	291474	Proteobacteria	Alphaproteobacteria	3.27713	57.2	-	LIEA01	52	3388	3053	8/14/15	3/26/17	Contig	Sardarkrushinagar Dantiwada Agricultural University	SAMN03945529	GCA_001267725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/725/GCA_001267725.1_ASM126772v1	-	SKN13
Clostridioides difficile Y41	1151375	PRJNA85925	85925	Terrabacteria group	Firmicutes	4.07438	28.2	-	AVKT01	39	3786	3661	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766768	GCA_000450865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/865/GCA_000450865.2_ASM45086v2	-	Y41
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	4.0311	47.4	-	LBGC01	68	3866	3681	10/22/15	3/27/17	Scaffold	University of Alberta	SAMN03488012	GCA_001402275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/275/GCA_001402275.1_ASM140227v1	26454015	YB3G04
Bacillus thuringiensis serovar thailandensis	1042874	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.47131	35.2	-	NFEX01	29	5824	5491	5/17/17	5/24/17	Scaffold	Huazhong Agricultural University	SAMN05934576	GCA_002147755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/755/GCA_002147755.1_ASM214775v1	-	T68001
Burkholderia pseudomallei Pakistan 9	595498	PRJNA33789	33789	Proteobacteria	Betaproteobacteria	7.14771	68.1	-	ACKA01	71	7412	6791	3/31/09	5/18/17	Contig	Los Alamos National Laboratory	SAMN02470278	GCA_000182445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/182/445/GCA_000182445.1_ASM18244v1	-	Pakistan 9
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.70529	67	-	MUUJ01	195	7395	6944	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001940	GCA_001993675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/675/GCA_001993675.1_ASM199367v1	-	VC6823
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.599	50.8	-	FTWN01	350	5114	4422	1/28/17	2/26/17	Contig	SC	SAMEA2054658	GCA_900158645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/645/GCA_900158645.1_9803_4_64	-	2090STDY5461882
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.58227	38.2	-	FJAR01	43	3301	3144	2/20/16	3/27/17	Contig	SC	SAMEA2058273	GCA_900051655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/655/GCA_900051655.1_10771_1_1	-	2531STDY5467282
Pseudomonas syringae pv. theae ICMP 3923	1198673	PRJNA168431	168431	Proteobacteria	Gammaproteobacteria	6.25484	58.6	-	AOJV01	375	5868	5471	7/1/13	3/27/17	Scaffold	The New Zealand Institute for Plant & Food Research Limited	SAMN02470811	GCA_000416465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/465/GCA_000416465.2_ASM41646v2	-	ICMP 3923
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.12414	41.1	-	CEKG01	122	2144	2010	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233976	GCA_000940335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/335/GCA_000940335.1_Velvet_assembly	-	S10F
Streptococcus agalactiae GB00555	1154919	PRJNA86511	86511	Terrabacteria group	Firmicutes	2.08716	35.2	-	ALTN01	29	2142	2022	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991178	GCA_000290235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/235/GCA_000290235.1_ASM29023v1	-	GB00555
Acinetobacter baumannii AB056	710094	PRJNA43427	43427	Proteobacteria	Gammaproteobacteria	3.84425	39.1	-	ADGZ01	959	3743	3507	1/25/10	3/15/17	Contig	Case Western Reserve University	SAMN02469414	GCA_000177695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/695/GCA_000177695.1_ASM17769v1	20530228	AB056
Pseudomonas aeruginosa BWHPSA026	1402526	PRJNA219887	219887	Proteobacteria	Gammaproteobacteria	6.8021	66	-	AXQC01	11	6474	6274	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360698	GCA_000481185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/185/GCA_000481185.1_Pseu_aeru_BWH026_V1	-	BWHPSA026
Shigella flexneri 2a str. 301	198214	PRJNA383762	383762	Proteobacteria	Gammaproteobacteria	4.66	50.9	-	NEDR01	28	4996	4175	7/13/17	8/4/17	Scaffold	Lanzhou Institute of Husbandry and Pharmaceutical Sciences of CAAS	SAMN06806375	GCA_002217695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/695/GCA_002217695.1_ASM221769v1	-	301
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.61743	34.9	-	JQPG01	232	4189	3828	2/24/16	3/27/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949536	GCA_001568685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/685/GCA_001568685.1_ASM156868v1	26833181	56620
Streptococcus pyogenes ABC020054184	1439236	PRJNA232991	232991	Terrabacteria group	Firmicutes	1.81364	38.4	-	JJJD01	6	1844	1735	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567340	GCA_000631765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/765/GCA_000631765.1_Stre_pyog_ABC020054184_V1	-	ABC020054184
Neisseria meningitidis M13255	1095690	PRJNA76311	76311	Proteobacteria	Betaproteobacteria	2.25467	51.4	-	ANRJ01	38	2608	2237	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055185	GCA_000327945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/945/GCA_000327945.2_ASM32794v2	-	M13255
Helicobacter pylori HP260AFi	1159076	PRJNA89323	89323	Proteobacteria	delta/epsilon subdivisions	1.6329	39.3	-	APEY01	55	1603	1459	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436923	GCA_000345945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/945/GCA_000345945.2_ASM34594v2	-	HP260AFi
Streptococcus pneumoniae GA14373	760776	PRJNA48709	48709	Terrabacteria group	Firmicutes	2.181	39.7	-	AILN01	18	2415	2112	3/7/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00738151	GCA_000251485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/485/GCA_000251485.2_ASM25148v2	-	GA14373
Clostridium tyrobutyricum	1519	PRJNA326183	326183	Terrabacteria group	Firmicutes	3.07404	30.9305	chromosome:CP016280.1; plasmid pW428:CP016281.1	-	2	2976	2864	7/5/16	7/5/16	Complete Genome	Nanjing Tech University	SAMN05271368	GCA_001679705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/705/GCA_001679705.1_ASM167970v1	-	W428
Mycobacterium tuberculosis PanR0805	1352590	PRJNA210067	210067	Terrabacteria group	Actinobacteria	4.39402	65.1979	chromosome:NZ_CM002107.1/CM002107.1	ATSJ01	1	4305	3946	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471054	GCA_000445775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/775/GCA_000445775.1_fedora0805c_IS	23884993	PanR0805
Mycobacterium avium subsp. hominissuis	439334	PRJNA329423	329423	Terrabacteria group	Actinobacteria	5.28948	68.9	-	MBFO01	183	5072	4736	9/15/17	9/18/17	Scaffold	Kobe Institute of Health	SAMN05412758	GCA_002304065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/065/GCA_002304065.1_ASM230406v1	28957464	CAM177
Bacillus cereus LCT-BC25	1347791	PRJNA208770	208770	Terrabacteria group	Firmicutes	5.15451	35.5	-	ATHM01	7	5456	5222	7/25/13	3/24/17	Scaffold	BGI	SAMN02469361	GCA_000440035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/035/GCA_000440035.1_Bacillus_cereus_LCT-BC25	24385570	LCT-BC25
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.69968	31.9	-	LWAU01	101	2746	2606	4/15/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04605207	GCA_001622605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/605/GCA_001622605.1_ASM162260v1	-	LRKNS017
Listeria monocytogenes	1639	PRJNA276410	276410	Terrabacteria group	Firmicutes	2.98293	37.8	-	JYOK01	25	3057	2964	4/23/15	2/27/17	Scaffold	University of Veterinary Medicine Vienna	SAMN03372551	GCA_000978685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/978/685/GCA_000978685.1_ASM97868v1	-	5KSM
Yersinia pestis 2	755866	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.45391	47.9	-	ADOX01	1057	4231	3963	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02402993	GCA_000320445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/320/445/GCA_000320445.1_ASM32044v1	23271803	2
Campylobacter jejuni subsp. jejuni H22082	885274	PRJNA52017	52017	Proteobacteria	delta/epsilon subdivisions	1.65912	30.6	-	AEIP01	28	1717	1594	1/11/12	3/15/17	Contig	"Institute of Veterinary, Animal and Biomedical Sciences,  Massey University"	SAMN00113351	GCA_000242395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/395/GCA_000242395.2_ASM24239v2	22096527	H22082
Clostridium acetobutylicum EA 2018	863638	PRJNA50455	50455	Terrabacteria group	Firmicutes	4.13223	30.9	chromosome:NC_017295.1/CP002118.1; plasmid EA2018plasmid:NC_017296.1/CP002119.1	-	2	4030	3877	3/8/11	8/1/17	Complete Genome	"Institute of plant physiology and ecology, Shanghai institutes for biological sciences, Chinese academy of sciences"	SAMN02603410	GCA_000191905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/905/GCA_000191905.1_ASM19190v1	21284892	EA 2018
Staphylococcus aureus subsp. aureus MN8	548470	PRJNA31533	31533	Terrabacteria group	Firmicutes	2.89959	32.7501	chromosome:NZ_CM000952.1/CM000952.1	ACJA02	1	5951	5672	3/16/09	3/2/17	Chromosome	BCM	SAMN00001499	GCA_000160195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/195/GCA_000160195.1_ASM16019v1	-	MN8
Staphylococcus aureus subsp. aureus ATCC BAA-39	862516	PRJNA50533	50533	Terrabacteria group	Firmicutes	2.93452	33.1	-	AEEK01	25	3021	2864	8/20/10	3/2/17	Scaffold	Baylor College of Medicine	SAMN00117207	GCA_000146385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/146/385/GCA_000146385.1_ASM14638v1	-	ATCC BAA-39
Clostridium acetobutylicum ATCC 824	272562	PRJNA77	77	Terrabacteria group	Firmicutes	4.13288	30.9	chromosome:NC_003030.1/AE001437.1; plasmid pSOL1:NC_001988.2/AE001438.3	-	2	3911	3778	10/3/01	8/3/16	Complete Genome	Genome Therapeutics	SAMN02603243	GCA_000008765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/765/GCA_000008765.1_ASM876v1	11466286	ATCC 824
Campylobacter jejuni subsp. jejuni 129-258	889213	PRJNA52847	52847	Proteobacteria	delta/epsilon subdivisions	1.60816	30.6	-	AINY01	102	1691	1559	3/16/12	3/15/17	Contig	Cornell University	SAMN02429066	GCA_000254255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/255/GCA_000254255.2_ASM25425v2	-	129-258
Yersinia pestis 2330	755862	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.42764	47.5	-	ADOY01	798	4186	3980	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02402994	GCA_000320465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/320/465/GCA_000320465.1_ASM32046v1	23271803	2330
Listeria monocytogenes	1639	PRJNA284395	284395	Terrabacteria group	Firmicutes	2.92218	37.9	-	LDJC01	5	3006	2898	9/29/15	2/28/17	Scaffold	University of Padova	SAMN03154323	GCA_001302385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/385/GCA_001302385.1_ASM130238v1	-	L70
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.74246	31.8	-	LWAV01	72	2800	2657	4/15/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04605224	GCA_001622625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/625/GCA_001622625.1_ASM162262v1	-	LRKNS020
Bacillus cereus LCT-BC235	1348059	PRJNA208771	208771	Terrabacteria group	Firmicutes	5.14873	35.5	-	ATHN01	5	5465	5228	7/25/13	3/24/17	Scaffold	BGI	SAMN02469357	GCA_000440055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/055/GCA_000440055.1_Bacillus_cereus_LCT-BC235	24407625	LCT-BC235
Mycobacterium avium subsp. hominissuis	439334	PRJNA329422	329422	Terrabacteria group	Actinobacteria	5.24869	69	-	MBFN01	167	5021	4720	9/15/17	9/18/17	Scaffold	Kobe Institute of Health	SAMN05412756	GCA_002304075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/075/GCA_002304075.1_ASM230407v1	28957464	CAM57
Mycobacterium tuberculosis PanR0902	1352591	PRJNA210068	210068	Terrabacteria group	Actinobacteria	4.39221	65.1979	chromosome:NZ_CM002106.1/CM002106.1	ATSK01	1	4297	4032	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471077	GCA_000445795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/795/GCA_000445795.1_fedora0902c_IS	23884993	PanR0902
Clostridium acetobutylicum DSM 1731	991791	PRJNA63241	63241	Terrabacteria group	Firmicutes	4.14558	30.8866	chromosome:NC_015687.1/CP002660.1; plasmid pSMBa:NC_015686.1/CP002661.1; plasmid pSMBb:NC_015688.1/CP002662.1	-	3	4037	3897	6/17/11	6/15/17	Complete Genome	Institute Of Microbiology Chinese Academy of Sciences	SAMN02603396	GCA_000218855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/218/855/GCA_000218855.1_ASM21885v1	21742891	DSM 1731
Streptococcus pneumoniae GA14688	760777	PRJNA48711	48711	Terrabacteria group	Firmicutes	2.12172	39.8	-	AIKQ01	15	2353	2076	3/7/12	3/8/17	Contig	Institute for Genome Sciences	SAMN00668331	GCA_000251505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/505/GCA_000251505.2_ASM25150v2	-	GA14688
Helicobacter pylori HP260AFii	1159077	PRJNA89325	89325	Proteobacteria	delta/epsilon subdivisions	1.63141	39.3	-	APEZ01	57	1605	1457	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436924	GCA_000345965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/965/GCA_000345965.2_ASM34596v2	-	HP260AFii
Neisseria meningitidis 2006087	1095693	PRJNA76317	76317	Proteobacteria	Betaproteobacteria	2.20059	51.8	-	ANRG01	28	2607	2199	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055188	GCA_000327965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/965/GCA_000327965.2_ASM32796v2	-	2006087
Streptococcus pyogenes ABC020053060	1439225	PRJNA232990	232990	Terrabacteria group	Firmicutes	1.84309	38.4	-	JJJE01	6	1847	1717	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567339	GCA_000631785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/785/GCA_000631785.1_Stre_pyog_ABC020053060_V1	-	ABC020053060
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.94108	35	-	JQPH01	406	4580	4089	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949537	GCA_001568695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/695/GCA_001568695.1_ASM156869v1	26833181	56624
Clostridium estertheticum subsp. estertheticum	1552	PRJNA320887	320887	Terrabacteria group	Firmicutes	4.78561	30.8806	chromosome:NZ_CP015756.1/CP015756.1; plasmid pDSM8809:NZ_CP015757.1/CP015757.1	-	2	4449	4208	11/14/16	4/17/17	Complete Genome	University College Dublin	SAMN04958870	GCA_001877035.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/035/GCA_001877035.1_ASM187703v1	27891116	DSM 8809
Pseudomonas aeruginosa BWHPSA025	1402525	PRJNA219886	219886	Proteobacteria	Gammaproteobacteria	6.33776	66.5	-	AXQD01	4	5967	5819	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360697	GCA_000481205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/205/GCA_000481205.1_Pseu_aeru_BWH025_V1	-	BWHPSA025
Acinetobacter baumannii AB058	710095	PRJNA43429	43429	Proteobacteria	Gammaproteobacteria	3.76537	39.1	-	ADHA01	1040	3709	3457	1/25/10	3/15/17	Contig	Case Western Reserve University	SAMN02469415	GCA_000177715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/715/GCA_000177715.1_ASM17771v1	20530228	AB058
Streptococcus agalactiae GB00557	1154920	PRJNA86513	86513	Terrabacteria group	Firmicutes	2.03891	35.3	-	ALTO01	36	2102	1953	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991176	GCA_000290255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/255/GCA_000290255.1_ASM29025v1	-	GB00557
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.15888	41.1	-	CEES01	159	2191	2037	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233938	GCA_000940415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/415/GCA_000940415.1_Velvet_assembly	-	LS6Z
Pseudomonas syringae pv. actinidiae ICMP 19071	1194423	PRJNA167435	167435	Proteobacteria	Gammaproteobacteria	6.02137	58.8	-	AOJS01	391	5840	5300	7/1/13	3/24/17	Scaffold	The New Zealand Institute for Plant & Food Research Limited	SAMN02470802	GCA_000416485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/485/GCA_000416485.1_ASM41648v1	-	ICMP 19071
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.43863	38.2	-	FJAV01	22	3129	2965	2/20/16	3/28/17	Contig	SC	SAMEA2058461	GCA_900051665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/665/GCA_900051665.1_10771_1_40	-	2531STDY5467321
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.47056	50.8	-	FTWM01	370	4933	4235	1/28/17	2/26/17	Contig	SC	SAMEA2056770	GCA_900158665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/665/GCA_900158665.1_9803_4_66	-	2090STDY5488114
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.86643	67	-	MUUP01	178	7559	7120	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001947	GCA_001993685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/685/GCA_001993685.1_ASM199368v1	-	VC11747
Burkholderia pseudomallei 1026a	1085027	PRJNA73057	73057	Proteobacteria	Betaproteobacteria	7.15686	68.2	-	AHJA01	291	7505	6894	4/27/12	5/18/17	Contig	University of Washington	SAMN02471975	GCA_000259735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/735/GCA_000259735.1_ASM25973v1	22615773	1026a
Bacillus thuringiensis serovar shandongiensis	180886	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.05206	35.1	-	MOOI01	103	6392	5891	5/17/17	6/15/17	Scaffold	Huazhong Agricultural University	SAMN05934499	GCA_002147795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/795/GCA_002147795.1_ASM214779v1	-	BGSC 4AN1
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.88193	47.6	-	LBGL01	58	3639	3487	10/22/15	3/27/17	Scaffold	University of Alberta	SAMN03488021	GCA_001402335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/335/GCA_001402335.1_ASM140233v1	26454015	YB7A06
Clostridioides difficile Y155	1151376	PRJNA85927	85927	Terrabacteria group	Firmicutes	3.98024	28.2	-	AVKU01	232	3680	3536	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766736	GCA_000450885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/885/GCA_000450885.2_ASM45088v2	-	Y155
Brucella abortus	235	PRJNA284953	284953	Proteobacteria	Alphaproteobacteria	3.32154	57.2	-	LIUB01	19	3417	3174	10/21/15	3/27/17	Contig	University of New Hampshire	SAMN03965484	GCA_001401915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/915/GCA_001401915.1_ASM140191v1	26679575	8486
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.9497	37.9	-	MLPC01	320	2038	1781	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297120	GCA_001869735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/735/GCA_001869735.1_ASM186973v1	27118061	AWRIB853
Vibrio parahaemolyticus S100	1394638	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.02548	45.2	-	AWJW01	508	4772	4544	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338952	GCA_000490375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/375/GCA_000490375.1_S100	-	S100
Klebsiella pneumoniae UCICRE 2	1328390	PRJNA201985	201985	Proteobacteria	Gammaproteobacteria	5.34611	57.4	-	AYIN01	7	5326	5086	10/30/13	2/21/17	Scaffold	Broad Institute	SAMN02138607	GCA_000492635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/635/GCA_000492635.1_Kleb_pneu_UCI_2_V1	-	UCICRE 2
Clostridium botulinum	1491	PRJNA353866	353866	Terrabacteria group	Firmicutes	3.90659	28	-	MWIZ01	26	3770	3581	4/21/17	7/29/17	Contig	Northern Arizona University	SAMN06022740	GCA_002103875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/875/GCA_002103875.1_ASM210387v1	28733282	Man216
Enterococcus faecalis EnGen0354	1169299	PRJNA157769	157769	Terrabacteria group	Firmicutes	3.16594	37.3	-	ASDN01	22	3329	3145	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847615	GCA_000393135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/135/GCA_000393135.1_Ente_faec_RMC1_V1	-	RMC1
Streptococcus mutans	1309	PRJNA288626	288626	Terrabacteria group	Firmicutes	2.06601	36.8	-	LGAC01	37	2083	1957	8/11/16	3/28/17	Contig	University of Camerino	SAMN03835255	GCA_001703615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/703/615/GCA_001703615.1_ASM170361v1	-	AD01
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.14211	52.4	-	CQLN01	83	2507	2198	3/22/15	4/11/17	Contig	SC	SAMEA1677421	GCA_001151425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/425/GCA_001151425.1_8727_5_72	-	GCGS222
Enterococcus faecium EnGen0371	1169279	PRJNA157799	157799	Terrabacteria group	Firmicutes	2.79826	38	-	ASEC01	17	2848	2624	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847630	GCA_000393435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/435/GCA_000393435.1_Ente_faec_VAN_327_V1	-	VAN 327
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12929	41.2	-	CVYI01	80	2056	1891	6/23/15	3/26/17	Contig	SC	SAMEA1032965	GCA_001178345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/345/GCA_001178345.1_6830_4_73	-	EQUI0218
Campylobacter coli	195	PRJNA302283	302283	Proteobacteria	delta/epsilon subdivisions	2.03392	30.8	chromosome:NZ_CP019977.1/CP019977.1	-	1	2179	2055	3/9/17	3/11/17	Complete Genome	University of Nottingham	SAMN06456893	GCA_002024185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/185/GCA_002024185.1_ASM202418v1	-	aerotolerant OR12
Corynebacterium diphtheriae	1717	PRJNA341832	341832	Terrabacteria group	Actinobacteria	2.43311	53.6	-	MIOA01	53	2401	2191	11/10/16	8/24/17	Scaffold	National Institute for Communicable Diseases	SAMN05729416	GCA_001875805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/805/GCA_001875805.1_ASM187580v1	28726616	ST378-KZN-2015-45791
Yersinia enterocolitica subsp. palearctica	150053	PRJNA321834	321834	Proteobacteria	Gammaproteobacteria	4.55006	47	-	LYBL01	19	4290	3917	5/22/16	3/28/17	Scaffold	Instituto Oswaldo Cruz/ Fiocruz	SAMN05004669	GCA_001649555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/555/GCA_001649555.1_ASM164955v1	-	YE19
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.46613	59.7	-	FCGK01	35	5265	5092	1/21/16	3/27/17	Scaffold	SC	SAMEA2274103	GCA_001537565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/565/GCA_001537565.1_12045_8_25	-	2880STDY5683034
Campylobacter coli CVM 41955	1440023	PRJNA232313	232313	Proteobacteria	delta/epsilon subdivisions	1.73873	31.4	-	JAJY01	78	1814	1698	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887124	GCA_001419345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/345/GCA_001419345.1_Campylobacter_coli_CVM_41955_v1.0	-	CVM 41955
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	3.18352	32.7	-	CUED01	128	-	-	3/31/15	3/31/15	Scaffold	SC	SAMEA1035120	GCA_001223805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/805/GCA_001223805.1_7067_4_70	-	51-50
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.01103	54.9	-	JVTR01	167	4853	4654	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197303	GCA_001053395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/395/GCA_001053395.1_ASM105339v1	26230489	1323_ECLO
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.37565	64	-	FRZT01	36	5486	5284	12/14/16	3/21/17	Contig	SC	SAMEA2070539	GCA_900131055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/055/GCA_900131055.1_10665_3_51	-	221
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.83288	67	-	LPGN01	197	7126	6722	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449513	GCA_001530845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/845/GCA_001530845.1_ASM153084v1	-	MSMB1636WGS
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.30721	54.6	-	LPPS01	122	5324	5040	12/21/15	3/27/17	Contig	JCVI	SAMN04252916	GCA_001472455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/455/GCA_001472455.1_SMART_562.v1	-	SMART_562
Pseudomonas sp. Q12-87	177989	PRJNA290438	290438	Proteobacteria	Gammaproteobacteria	6.30362	60.7	-	LHVI01	45	5725	5548	8/18/15	4/16/17	Contig	JLU	SAMN03891675	GCA_001269755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/755/GCA_001269755.1_ASM126975v1	-	Q12-87
Streptomyces sp. NRRL F-6131	1463874	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.13805	73.8	-	JOHN01	207	7828	7402	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645482	GCA_000719695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/695/GCA_000719695.1_ASM71969v1	-	NRRL F-6131
Bacillus sp. OV166	1882763	PRJEB20262	381721	Terrabacteria group	Firmicutes	7.07684	38.3	-	FXWM01	2	6926	6454	5/13/17	6/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444673	GCA_900177675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/675/GCA_900177675.1_IMG-taxon_2716885053_annotated_assembly	-	OV166
Acinetobacter sp. WCHA29	2004649	PRJNA387062	387062	Proteobacteria	Gammaproteobacteria	3.02724	38.8	-	NHRQ01	62	2975	2730	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN07138950	GCA_002165335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/335/GCA_002165335.1_ASM216533v1	-	WCHA29
Clostridium sp. 26_21	1896977	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.43406	26.1	-	MNRO01	22	1365	1285	12/23/16	12/23/16	Scaffold	None	SAMN05717246	GCA_001915995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/915/995/GCA_001915995.1_ASM191599v1	27819664	-
Staphylococcus sp. HMSC58A02	1608879	PRJNA274531	274531	Terrabacteria group	Firmicutes	2.84666	32.6	-	LTMI01	82	2976	2856	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498872	GCA_001839065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/065/GCA_001839065.1_ASM183906v1	-	HMSC58A02
Prevotella sp. UBA4356	1947162	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.69538	49.5	-	DGSS01	21	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455777	GCA_002394045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/045/GCA_002394045.1_ASM239404v1	28894102	-
Mycobacterium sp. 96-892	1855664	PRJNA323571	323571	Terrabacteria group	Actinobacteria	4.93134	64.3	-	MAFN01	37	4882	4748	3/3/17	3/6/17	Contig	LNCC	SAMN05186794	GCA_002013545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/545/GCA_002013545.1_ASM201354v1	-	96-892
Mycobacterium sp. D16Q16	1855659	PRJNA323571	323571	Terrabacteria group	Actinobacteria	5.01708	64.3	-	MAEY01	35	4992	4825	3/3/17	3/6/17	Contig	LNCC	SAMN05186778	GCA_002013745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/745/GCA_002013745.1_ASM201374v1	-	D16Q16
Prevotella sp. UBA4337	1947159	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.46586	47.1	-	DGTL01	62	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452799	GCA_002394225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/225/GCA_002394225.1_ASM239422v1	28894102	-
Staphylococcus sp. HMSC58E11	1608881	PRJNA274533	274533	Terrabacteria group	Firmicutes	2.87491	32.7	-	LTMH01	80	2999	2860	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498881	GCA_001839075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/075/GCA_001839075.1_ASM183907v1	-	HMSC58E11
Clostridium sp. 26_22	1896978	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.6502	26.4	-	MNRP01	57	1697	1573	12/23/16	12/23/16	Scaffold	None	SAMN05717247	GCA_001916005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/005/GCA_001916005.1_ASM191600v1	27819664	-
Acinetobacter sp. WCHA62	2004645	PRJNA387062	387062	Proteobacteria	Gammaproteobacteria	4.45426	38	-	NHRM01	161	4312	4066	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN07138954	GCA_002165345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/345/GCA_002165345.1_ASM216534v1	-	WCHA62
Bacillus sp. GeD10	1301086	PRJEB1558	198652	Terrabacteria group	Firmicutes	5.86569	35.1	-	CAVI01	327	6390	5889	4/22/13	4/8/17	Scaffold	MDA	SAMEA2272577	GCA_000382845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/845/GCA_000382845.1_ASM38284v1	-	GeD10
Streptomyces sp. NRRL S-350	1463902	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.78315	73	-	JOHO01	253	7842	7443	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645483	GCA_000719705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/705/GCA_000719705.1_ASM71970v1	-	NRRL S-350
Pseudomonas sp. Pf153	1699309	PRJNA290438	290438	Proteobacteria	Gammaproteobacteria	5.98104	60.8	-	LHVL01	30	5231	5076	8/18/15	4/11/17	Contig	JLU	SAMN03891678	GCA_001269775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/775/GCA_001269775.1_ASM126977v1	-	Pf153
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.12614	55.2	-	LPPP01	101	5157	4892	12/21/15	3/27/17	Contig	JCVI	SAMN04252919	GCA_001472475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/475/GCA_001472475.1_SMART_599.v1	-	SMART_599
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.97078	67	-	LPGP01	138	7345	6919	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449515	GCA_001530865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/865/GCA_001530865.1_ASM153086v1	-	MSMB1805WGS
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82937	64.2	-	FVCD01	10	4813	4699	3/10/17	3/18/17	Contig	SC	SAMEA2071296	GCA_900131065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/065/GCA_900131065.1_10665_3_50	-	220
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.65609	55.2	-	JWFJ01	153	4497	4342	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03196999	GCA_001053635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/635/GCA_001053635.1_ASM105363v1	26230489	1034_ECLO
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	3.00913	32.6	-	CUDE01	174	-	-	3/31/15	3/31/15	Scaffold	SC	SAMEA1035067	GCA_001227245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/245/GCA_001227245.1_7067_4_46	-	51-18
Campylobacter coli CVM 41958	1440025	PRJNA232315	232315	Proteobacteria	delta/epsilon subdivisions	1.73675	31.3	-	JAKA01	21	1805	1712	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887126	GCA_001419385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/385/GCA_001419385.1_Campylobacter_coli_CVM_41958_v1.0	-	CVM 41958
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.05319	60	-	FCLA01	16	4819	4659	1/21/16	3/27/17	Scaffold	SC	SAMEA2274046	GCA_001537585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/585/GCA_001537585.1_12082_3_71	-	2880STDY5682974
Lactobacillus plantarum	1590	PRJNA378763	378763	Terrabacteria group	Firmicutes	3.18243	44.5	-	NDXC01	84	3060	3040	10/2/17	10/2/17	Contig	University College Cork	SAMN06561695	GCA_002407395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/407/395/GCA_002407395.1_ASM240739v1	-	NI326
Yersinia enterocolitica	630	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.20581	47.3	-	NBTF01	24	5039	4240	4/10/17	4/10/17	Contig	US Food and Drug Administration 	SAMN04875561	GCA_002083295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/295/GCA_002083295.1_ASM208329v1	-	FDAARGOS_224
Corynebacterium diphtheriae	1717	PRJNA341832	341832	Terrabacteria group	Actinobacteria	2.43916	53.6	-	MINY01	61	2395	2201	11/10/16	8/24/17	Scaffold	National Institute for Communicable Diseases	SAMN05729414	GCA_001875815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/815/GCA_001875815.1_ASM187581v1	28726616	ST378-KZN-2015-45789
Flavobacterium columnare	996	PRJNA308000	308000	FCB group	Bacteroidetes/Chlorobi group	3.3216	30.8	chromosome:NZ_CP013992.1/CP013992.1	-	1	2909	2778	1/25/16	4/4/17	Complete Genome	Mississippi State University	SAMN04386100	GCA_001534645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/645/GCA_001534645.1_ASM153464v1	27231366	94-081
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15105	41.1	-	CWBB01	87	2101	1927	6/24/15	3/26/17	Contig	SC	SAMEA1032966	GCA_001178365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/365/GCA_001178365.1_6903_4_52	-	EQUI0103
Enterococcus faecium EnGen0261	1158550	PRJNA88819	88819	Terrabacteria group	Firmicutes	3.02977	37.8	-	AJAA01	23	3098	2884	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809099	GCA_000393675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/675/GCA_000393675.1_Ente_faec_UAA1024_V1	-	UAA1024
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14246	52.4	-	CQJS01	87	2517	2197	3/23/15	4/10/17	Contig	SC	SAMEA1690392	GCA_001152885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/885/GCA_001152885.1_8727_8_25	-	GCGS121
Streptococcus mutans	1309	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.14402	36.7	-	NBTK01	1	2120	1909	4/10/17	4/13/17	Contig	US Food and Drug Administration 	SAMN04875584	GCA_002083175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/175/GCA_002083175.1_ASM208317v1	-	FDAARGOS_258
Enterococcus faecalis EnGen0355	1169300	PRJNA157771	157771	Terrabacteria group	Firmicutes	3.03417	37.4	-	ASDO01	9	3142	2967	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847616	GCA_000393155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/155/GCA_000393155.1_Ente_faec_T19_V1	-	T19
Clostridium botulinum	1491	PRJNA353866	353866	Terrabacteria group	Firmicutes	4.11339	28	-	MWJA01	37	4039	3803	4/21/17	7/29/17	Contig	Northern Arizona University	SAMN06022741	GCA_002103885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/885/GCA_002103885.1_ASM210388v1	28733282	BrDuraAf
Klebsiella pneumoniae BWH 30	1328385	PRJNA201970	201970	Proteobacteria	Gammaproteobacteria	5.53359	57.3	-	AYIQ01	8	5574	5309	10/30/13	2/21/17	Scaffold	Broad Institute	SAMN02138595	GCA_000492695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/695/GCA_000492695.1_Kleb_pneu_BWH_30_V1	-	BWH 30
Vibrio parahaemolyticus S098	1394637	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.2973	45.2	-	AWJX01	659	5030	4726	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338951	GCA_000490395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/395/GCA_000490395.1_S098	-	S098
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.98142	38	-	MLPD01	296	2035	1798	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297121	GCA_001869765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/765/GCA_001869765.1_ASM186976v1	27118061	AWRIB858
Brucella abortus	235	PRJNA284953	284953	Proteobacteria	Alphaproteobacteria	3.26231	57.2	-	LITX01	16	3348	3118	10/21/15	3/27/17	Contig	University of New Hampshire	SAMN03965478	GCA_001401925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/925/GCA_001401925.1_ASM140192v1	26679575	11796
Clostridioides difficile Y401	1151392	PRJNA85959	85959	Terrabacteria group	Firmicutes	4.00015	28.4	-	AVLK01	205	3717	3553	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766767	GCA_000450905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/905/GCA_000450905.2_ASM45090v2	-	Y401
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.9388	47.7	-	LBFV01	49	3657	3503	10/22/15	3/27/17	Scaffold	University of Alberta	SAMN03488005	GCA_001402365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/365/GCA_001402365.1_ASM140236v1	26454015	YB1G06
Bacillus thuringiensis serovar leesis	169759	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.13281	34.9	-	MOOG01	115	6537	5996	5/17/17	5/24/17	Scaffold	Huazhong Agricultural University	SAMN05934496	GCA_002147805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/805/GCA_002147805.1_ASM214780v1	-	BGSC 4AK1
Burkholderia pseudomallei 1258a	1086032	PRJNA73147	73147	Proteobacteria	Betaproteobacteria	6.76388	68.1	-	AHJB01	340	7035	6484	4/27/12	5/18/17	Contig	University of Washington	SAMN02471989	GCA_000259755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/755/GCA_000259755.1_ASM25975v1	22615773	1258a
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.70971	67	-	MUUS01	284	7429	6938	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001950	GCA_001993715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/715/GCA_001993715.1_ASM199371v1	-	VC14358
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.56709	50.8	-	FTWQ01	379	5118	4363	1/28/17	2/26/17	Contig	SC	SAMEA2055573	GCA_900158675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/675/GCA_900158675.1_9803_4_67	-	2090STDY5488115
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.45214	38.3	-	FJCB01	34	3163	3020	2/20/16	3/27/17	Contig	SC	SAMEA2059993	GCA_900051675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/675/GCA_900051675.1_10771_1_57	-	2531STDY5467338
Pseudomonas syringae pv. actinidiae ICMP 19073	1194406	PRJNA167434	167434	Proteobacteria	Gammaproteobacteria	5.97455	58.8	-	AOJR01	745	5732	5174	7/1/13	3/24/17	Scaffold	The New Zealand Institute for Plant & Food Research Limited	SAMN02470795	GCA_000416505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/505/GCA_000416505.1_ASM41650v1	-	ICMP 19073
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.11298	41.1	-	CEIA01	64	2107	1975	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234028	GCA_000940575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/575/GCA_000940575.1_Velvet_assembly	-	S16Z
Streptococcus agalactiae GB00561	1154921	PRJNA86515	86515	Terrabacteria group	Firmicutes	2.19553	35.5	-	ALTP01	44	2292	2178	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991177	GCA_000290275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/275/GCA_000290275.1_ASM29027v1	-	GB00561
Acinetobacter baumannii AB059	710096	PRJNA43431	43431	Proteobacteria	Gammaproteobacteria	3.90942	39.2	-	ADHB01	1062	3854	3589	1/25/10	3/15/17	Contig	Case Western Reserve University	SAMN02469412	GCA_000177735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/735/GCA_000177735.1_ASM17773v1	20530228	AB059
Pseudomonas aeruginosa BWHPSA024	1402524	PRJNA219885	219885	Proteobacteria	Gammaproteobacteria	6.76869	66.1	-	AXQE01	5	6475	6315	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360696	GCA_000481225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/225/GCA_000481225.1_Pseu_aeru_BWH024_V1	-	BWHPSA024
Shigella flexneri K-671	766152	PRJNA49083	49083	Proteobacteria	Gammaproteobacteria	4.71529	50.8	-	AFHA01	85	5289	5142	5/12/11	2/28/12	Contig	Institute for Genome Sciences	SAMN00792446	GCA_000213435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/435/GCA_000213435.2_ASM21343v2	-	K-671
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.8403	35	-	JQPI01	443	4396	3932	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949538	GCA_001568725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/725/GCA_001568725.1_ASM156872v1	26833181	56625
Streptococcus pyogenes ABC020040643	1439118	PRJNA232986	232986	Terrabacteria group	Firmicutes	1.77672	38.4	-	JJJF01	5	1780	1680	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567335	GCA_000631805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/805/GCA_000631805.1_Stre_pyog_ABC020040643_V1	-	ABC020040643
Neisseria meningitidis 88050	1095696	PRJNA76323	76323	Proteobacteria	Betaproteobacteria	2.2044	51.8	-	ANRD01	19	2556	2162	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055190	GCA_000327985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/327/985/GCA_000327985.2_ASM32798v2	-	88050
Helicobacter pylori HP260ASii	1159078	PRJNA89327	89327	Proteobacteria	delta/epsilon subdivisions	1.63328	39.3	-	APFA01	55	1604	1459	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436783	GCA_000345985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/345/985/GCA_000345985.2_ASM34598v2	-	HP260ASii
Streptococcus pneumoniae GA17719	760792	PRJNA48741	48741	Terrabacteria group	Firmicutes	2.14825	39.7	-	AILO01	12	2317	2040	3/7/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00738150	GCA_000251545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/545/GCA_000251545.2_ASM25154v2	-	GA17719
Candidatus Woesebacteria bacterium GW2011_GWF1_31_35	1618600	PRJNA273161	273161	unclassified Bacteria	Bacteria candidate phyla	0.819458	30.8	chromosome:CP011214.1	-	1	955	909	6/19/15	9/21/17	Complete Genome	"Banfield Lab, University of California, Berkeley"	SAMN03319246	GCA_001029755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/755/GCA_001029755.1_ASM102975v1	-	-
Mycobacterium tuberculosis PanR0903	1352592	PRJNA210069	210069	Terrabacteria group	Actinobacteria	4.40266	65.5499	chromosome:NZ_CM002105.1/CM002105.1	ATSL01	1	4273	4081	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471097	GCA_000445815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/815/GCA_000445815.1_fedora0903_IS	23884993	PanR0903
Mycobacterium avium subsp. hominissuis	439334	PRJNA344396	344396	Terrabacteria group	Actinobacteria	5.39231	68.5	-	MKCV01	214	5283	4621	9/15/17	9/18/17	Scaffold	Kobe Institute of Health	SAMN05821951	GCA_002304095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/095/GCA_002304095.1_ASM230409v1	28957464	HP17
Bacillus cereus	1396	PRJNA243586	243586	Terrabacteria group	Firmicutes	5.60021	35.3	-	JMSG01	5	6045	5605	8/22/14	4/10/17	Scaffold	Los Alamos National Laboratory	SAMN02739296	GCA_000743195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/195/GCA_000743195.1_BFW	25301645	F1-15
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.72938	31.9	-	LWAW01	96	2780	2637	4/15/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04605225	GCA_001622635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/635/GCA_001622635.1_ASM162263v1	-	LRKNS026
Listeria monocytogenes	1639	PRJNA284395	284395	Terrabacteria group	Firmicutes	2.99474	38	-	LDJD01	2	3111	2991	9/29/15	2/28/17	Scaffold	University of Padova	SAMN03154322	GCA_001302395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/395/GCA_001302395.1_ASM130239v1	-	L64
Yersinia pestis 164	755861	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.44481	47.8	-	ADOW01	1053	4224	3930	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02402992	GCA_000323185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/185/GCA_000323185.1_ASM32318v1	23271803	164
Campylobacter jejuni subsp. jejuni 51494	889216	PRJNA52857	52857	Proteobacteria	delta/epsilon subdivisions	1.80364	30.2	-	AINZ01	215	1944	1780	3/16/12	3/15/17	Contig	Cornell University	SAMN02429005	GCA_000254275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/275/GCA_000254275.2_ASM25427v2	-	51494
Methanocaldococcus bathoardescens	1301915	PRJNA242490	242490	Euryarchaeota	Methanococci	1.60756	30.8	chromosome:NZ_CP009149.1/CP009149.1	-	1	1698	1614	8/12/14	4/9/17	Complete Genome	Kyung Hee University	SAMN02951366	GCA_000739065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/065/GCA_000739065.1_ASM73906v1	25634941	JH146
Staphylococcus aureus subsp. aureus TCH70	548475	PRJNA31543	31543	Terrabacteria group	Firmicutes	2.81893	32.7	-	ACHH02	5	2952	2799	2/20/09	3/2/17	Scaffold	Baylor College of Medicine	SAMN00001489	GCA_000149015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/149/015/GCA_000149015.1_ASM14901v1	-	TCH70
Staphylococcus aureus subsp. aureus USA300_TCH959	450394	PRJNA19921	19921	Terrabacteria group	Firmicutes	2.84548	32.9648	plasmid pUSA300HOUMS:NC_010066.1/CP000732.1	AASB02	174	2957	2784	11/14/07	3/2/17	Scaffold	Baylor College of Medicine	SAMN00001491	GCA_000153665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/153/665/GCA_000153665.1_ASM15366v1	-	USA300_TCH959
Mycoplasma californicum HAZ160_1	1397850	PRJDB1456	252759	Terrabacteria group	Tenericutes	0.799088	30.8	chromosome:NZ_AP013353.1/AP013353.1	-	1	679	626	6/13/14	4/10/17	Complete Genome	"National Institute of Animal Health, National Agriculture and Food Research Organization"	SAMD00061018	GCA_000829335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/335/GCA_000829335.1_ASM82933v1	"2,501,314,325,281,380"	HAZ160_1
Campylobacter jejuni subsp. jejuni LMG 23216	889239	PRJNA52903	52903	Proteobacteria	delta/epsilon subdivisions	1.47429	30.3	-	AIOA01	121	1541	1432	3/16/12	3/15/17	Contig	Cornell University	SAMN02428944	GCA_000254295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/295/GCA_000254295.2_ASM25429v2	-	LMG 23216
Yersinia pestis 2504	755863	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.47565	47.6	-	ADOZ01	975	4321	3986	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02402995	GCA_000323205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/205/GCA_000323205.1_ASM32320v1	23271803	2504
Listeria monocytogenes	1639	PRJNA295352	295352	Terrabacteria group	Firmicutes	3.05352	37.9	-	LJOZ01	10	3148	3039	12/10/15	3/1/17	Scaffold	Teagasc Food Research Centre	SAMN04046447	GCA_001465135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/465/135/GCA_001465135.1_ASM146513v1	-	198
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.72039	31.8	-	LWAX01	72	2773	2640	4/15/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04605226	GCA_001622665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/665/GCA_001622665.1_ASM162266v1	-	LRKNS029
Bacillus cereus ATCC 10876	526980	PRJNA243525	243525	Terrabacteria group	Firmicutes	5.99608	34.8	-	JMPW01	2	6346	5930	8/26/14	4/10/17	Scaffold	Los Alamos National Laboratory	SAMN02736987	GCA_000743815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/815/GCA_000743815.1_BDJ	25301645	ATCC 10876
Mycobacterium avium subsp. hominissuis	439334	PRJNA344399	344399	Terrabacteria group	Actinobacteria	5.12104	69.1	-	MKCX01	100	4873	4563	9/15/17	9/18/17	Scaffold	Kobe Institute of Health	SAMN05821954	GCA_002304125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/125/GCA_002304125.1_ASM230412v1	28957464	OCU556
Mycobacterium tuberculosis PanR0904	1352593	PRJNA210070	210070	Terrabacteria group	Actinobacteria	4.40715	65.4996	chromosome:NZ_CM002104.1/CM002104.1	ATSM01	1	4281	4074	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471078	GCA_000445835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/835/GCA_000445835.1_fedora0904_IS	23884993	PanR0904
Mycoplasma californicum	2113	PRJNA242382	242382	Terrabacteria group	Tenericutes	0.793841	30.8	chromosome:NZ_CP007521.1/CP007521.1	-	1	682	630	5/27/14	4/9/17	Complete Genome	University of Missouri - Columbia	SAMN02708703	GCA_000695835.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/835/GCA_000695835.1_ASM69583v1	24994797	ST-6
Streptococcus pneumoniae GA18068	760794	PRJNA48745	48745	Terrabacteria group	Firmicutes	2.16536	39.6	-	AIKR01	8	2354	2077	3/7/12	3/8/17	Contig	Institute for Genome Sciences	SAMN00717552	GCA_000251565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/565/GCA_000251565.2_ASM25156v2	-	GA18068
Helicobacter pylori HP260BFii	1159079	PRJNA89329	89329	Proteobacteria	delta/epsilon subdivisions	1.57686	39.4	-	APFB01	50	1552	1407	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436916	GCA_000346005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/005/GCA_000346005.2_ASM34600v2	-	HP260BFii
Neisseria meningitidis 98080	1095699	PRJNA76329	76329	Proteobacteria	Betaproteobacteria	2.18896	51.6	-	ANRA01	38	2547	2142	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055192	GCA_000328005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/005/GCA_000328005.2_ASM32800v2	-	98080
Streptococcus pyogenes ABC020038544	1439106	PRJNA232984	232984	Terrabacteria group	Firmicutes	1.82992	38.5	-	JJJG01	5	1851	1738	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567333	GCA_000631825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/825/GCA_000631825.1_Stre_pyog_ABC020038544_V1	-	ABC020038544
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.95441	35	-	JQPL01	417	4553	4052	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949541	GCA_001568735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/735/GCA_001568735.1_ASM156873v1	26833181	56628
Shigella flexneri 2747-71	766157	PRJNA49095	49095	Proteobacteria	Gammaproteobacteria	4.65619	51.1	-	AFHB01	50	5270	5125	5/12/11	2/28/12	Contig	Institute for Genome Sciences	SAMN00792447	GCA_000213455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/455/GCA_000213455.2_ASM21345v2	-	2747-71
Pseudomonas aeruginosa BWHPSA023	1402523	PRJNA219884	219884	Proteobacteria	Gammaproteobacteria	6.93231	66.1	-	AXQF01	16	6588	6416	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360695	GCA_000481245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/245/GCA_000481245.1_Pseu_aeru_BWH023_V1	-	BWHPSA023
Acinetobacter baumannii UMB001	933263	PRJNA60843	60843	Proteobacteria	Gammaproteobacteria	4.01348	39	-	AEPK01	118	3977	3630	12/21/10	3/15/17	Contig	Institute for Genome Sciences	SAMN02435970	GCA_000184475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/184/475/GCA_000184475.2_ASM18447v2	21639920	UMB001
Streptococcus agalactiae GB00588	1154922	PRJNA86517	86517	Terrabacteria group	Firmicutes	2.06022	35.2	-	ALTQ01	20	2088	1988	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991175	GCA_000290295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/295/GCA_000290295.1_ASM29029v1	-	GB00588
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.24392	41.1	-	CECS01	187	2308	2146	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233874	GCA_000940675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/675/GCA_000940675.1_Velvet_assembly	-	LL-S
Pseudomonas syringae pv. actinidiae ICMP 19101	1194397	PRJNA167407	167407	Proteobacteria	Gammaproteobacteria	6.0038	58.4	-	AOKM01	1851	6233	4963	7/1/13	3/24/17	Scaffold	The New Zealand Institute for Plant & Food Research Limited	SAMN02470810	GCA_000416585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/585/GCA_000416585.1_ASM41658v1	-	ICMP 19101
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.46126	38.2	-	FJCH01	30	3147	3011	2/20/16	3/28/17	Contig	SC	SAMEA2064212	GCA_900051685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/685/GCA_900051685.1_10771_3_8	-	2531STDY5467385
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.52712	50.8	-	FTWR01	374	5042	4323	1/28/17	2/26/17	Contig	SC	SAMEA2056771	GCA_900158695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/695/GCA_900158695.1_9803_4_69	-	2090STDY5488117
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.05831	66.9	-	MUUT01	458	7884	7242	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001951	GCA_001993725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/725/GCA_001993725.1_ASM199372v1	-	VC6972
Burkholderia pseudomallei 1258b	1086033	PRJNA73149	73149	Proteobacteria	Betaproteobacteria	7.07613	68.2	-	AHJC01	352	7345	6767	4/27/12	5/18/17	Contig	University of Washington	SAMN02471976	GCA_000259775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/775/GCA_000259775.1_ASM25977v1	22615773	1258b
Bacillus thuringiensis serovar yunnanensis	143794	PRJNA349211	349211	Terrabacteria group	Firmicutes	7.86885	34.8	-	MOOH01	409	8633	7556	5/17/17	5/24/17	Scaffold	Huazhong Agricultural University	SAMN05934498	GCA_002147825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/825/GCA_002147825.1_ASM214782v1	-	BGSC 4AM1
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.88841	47.7	-	LBFZ01	51	3611	3457	10/22/15	3/27/17	Scaffold	University of Alberta	SAMN03488009	GCA_001402415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/415/GCA_001402415.1_ASM140241v1	26454015	YB2G05
Clostridioides difficile P1	1151393	PRJNA85961	85961	Terrabacteria group	Firmicutes	4.10451	28.7	-	AVLL01	160	3803	3641	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766689	GCA_000450925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/925/GCA_000450925.2_ASM45092v2	-	P1
Brucella abortus	235	PRJNA284953	284953	Proteobacteria	Alphaproteobacteria	3.27082	57.2	-	LITV01	13	3359	3126	10/21/15	3/27/17	Contig	University of New Hampshire	SAMN03965480	GCA_001401935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/935/GCA_001401935.1_ASM140193v1	26679575	1365.1
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.9639	38	-	MLPE01	215	2060	1830	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297122	GCA_001869775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/775/GCA_001869775.1_ASM186977v1	27118061	AWRIB863
Vibrio parahaemolyticus S097	1394636	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.02481	45.3	-	AWJY01	531	4727	4549	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338950	GCA_000490415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/415/GCA_000490415.1_S097	-	S097
Klebsiella pneumoniae BWH 28	1328384	PRJNA201968	201968	Proteobacteria	Gammaproteobacteria	5.5571	57.2	-	AYIS01	6	5436	5218	10/30/13	2/21/17	Scaffold	Broad Institute	SAMN02138593	GCA_000492735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/735/GCA_000492735.1_Kleb_pneu_BWH_28_V1	-	BWH 28
Clostridium botulinum	1491	PRJNA353866	353866	Terrabacteria group	Firmicutes	3.99242	27.2	-	MWJB01	176	3746	3519	4/21/17	7/29/17	Contig	Northern Arizona University	SAMN06022742	GCA_002103895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/895/GCA_002103895.1_ASM210389v1	28733282	Bac-01-03998
Enterococcus faecalis EnGen0369	1169301	PRJNA157773	157773	Terrabacteria group	Firmicutes	3.12208	37.5	-	ASDP01	25	3261	3037	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847617	GCA_000393175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/175/GCA_000393175.1_Ente_faec_39-5_V1	-	39-5
Streptococcus mutans	1309	PRJNA377637	377637	Terrabacteria group	Firmicutes	2.01298	36.8	-	NBFF01	57	2006	1878	6/30/17	7/3/17	Contig	Peking University School of Stomatology	SAMN06464160	GCA_002212845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/845/GCA_002212845.1_ASM221284v1	-	PKUSS-6
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.14658	52.4	-	CQLE01	70	2528	2191	3/23/15	4/10/17	Contig	SC	SAMEA1677425	GCA_001153945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/945/GCA_001153945.1_8727_5_69	-	GCGS219
Enterococcus faecium EnGen0262	1158551	PRJNA88821	88821	Terrabacteria group	Firmicutes	3.22342	37.9	-	AJAB01	37	3302	3040	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809100	GCA_000393695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/695/GCA_000393695.1_Ente_faec_UAA1025_V1	-	UAA1025
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12698	41.2	-	CWBA01	79	2059	1875	6/23/15	3/26/17	Contig	SC	SAMEA1032967	GCA_001178385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/385/GCA_001178385.1_6903_4_57	-	EQUI0106
Lacinutrix sp. 5H-3-7-4	983544	PRJNA62899	62899	FCB group	Bacteroidetes/Chlorobi group	3.29617	30.8	chromosome:NC_015638.1/CP002825.1	-	1	2993	2931	6/3/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00713635	GCA_000211855.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/211/855/GCA_000211855.3_ASM21185v3	21725025	5H-3-7-4
Corynebacterium diphtheriae	1717	PRJNA341832	341832	Terrabacteria group	Actinobacteria	2.43771	53.6	-	MINZ01	60	2394	2203	11/10/16	8/24/17	Scaffold	National Institute for Communicable Diseases	SAMN05729415	GCA_001875855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/855/GCA_001875855.1_ASM187585v1	28726616	ST378-KZN-2015-45790
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	6.09934	47.3	-	CTRE01	7029	4578	4557	3/26/15	6/14/15	Scaffold	SC	SAMEA980149	GCA_001223005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/005/GCA_001223005.1_4976_2_11	-	YE215/02
Lactobacillus plantarum	1590	PRJEB13186	319351	Terrabacteria group	Firmicutes	3.28509	44.4	-	FJVL01	66	3229	3036	4/22/16	7/3/17	Contig	handong university	SAMEA3909876	GCA_900078525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/525/GCA_900078525.1_lactobacillus_plantarum_BFE5092	-	BFE 5092
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.01145	60.1	-	FCHG01	14	4759	4596	1/21/16	3/27/17	Scaffold	SC	SAMEA2273924	GCA_001537605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/605/GCA_001537605.1_12082_2_59	-	2880STDY5682851
Campylobacter coli CVM 41963	1440016	PRJNA232275	232275	Proteobacteria	delta/epsilon subdivisions	1.75662	31.3	-	JAJR01	83	1870	1733	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887120	GCA_001419395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/395/GCA_001419395.1_Campylobacter_coli_CVM_41963_v1.0	-	CVM 41963
Staphylococcus haemolyticus	1283	PRJEB2705	204481	Terrabacteria group	Firmicutes	2.98502	32.6	-	CUDB01	131	-	-	3/31/15	3/31/15	Scaffold	SC	SAMEA1035052	GCA_001230985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/985/GCA_001230985.1_7067_4_42	-	51-11
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.71137	55.7	-	JWAV01	146	4566	4386	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197117	GCA_001053955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/955/GCA_001053955.1_ASM105395v1	26230489	1160_ECLO
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98524	64.2	-	FRZJ01	37	4949	4810	12/14/16	3/21/17	Contig	SC	SAMEA2071297	GCA_900131075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/075/GCA_900131075.1_10665_3_53	-	223
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.30054	66.9	-	LPGQ01	107	6909	6515	1/22/16	6/27/17	Contig	Northern Arizona University	SAMN03449516	GCA_001530885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/530/885/GCA_001530885.1_ASM153088v1	-	MSMB1809WGS
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.09056	55.1	-	LPPQ01	70	5121	4893	12/21/15	3/27/17	Contig	JCVI	SAMN04252918	GCA_001472495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/495/GCA_001472495.1_SMART_598.v1	-	SMART_598
Pseudomonas sp. P1.8	1699310	PRJNA290438	290438	Proteobacteria	Gammaproteobacteria	6.35627	58.8	-	LHVM01	43	5788	5520	8/18/15	4/11/17	Contig	JLU	SAMN03891679	GCA_001269805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/805/GCA_001269805.1_ASM126980v1	-	P1.8
Streptomyces sp. NRRL F-5917	1463873	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.01147	72.6	-	JOHQ01	154	6843	6480	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645485	GCA_000719735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/735/GCA_000719735.1_ASM71973v1	-	NRRL F-5917
Bacillus sp. CPSM8	1202457	PRJNA169112	169112	Terrabacteria group	Firmicutes	4.39587	45.9	-	ANNR02	36	4362	4167	6/10/13	8/2/15	Scaffold	University of Georgia	SAMN02471779	GCA_000409505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/505/GCA_000409505.2_CPSM8.1	24482525	CPSM8
Acinetobacter sp. WCHA5	2004650	PRJNA387062	387062	Proteobacteria	Gammaproteobacteria	3.65794	42.4	-	NHRR01	83	3544	3376	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN07138949	GCA_002165375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/375/GCA_002165375.1_ASM216537v1	-	WCHA5
Clostridium sp. 27_14	1896979	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.65215	27.5	-	MNRQ01	59	1612	1460	12/23/16	12/23/16	Scaffold	None	SAMN05717248	GCA_001916035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/035/GCA_001916035.1_ASM191603v1	27819664	-
Staphylococcus sp. HMSC62A08	1608883	PRJNA274535	274535	Terrabacteria group	Firmicutes	2.58735	33.4	-	LTMG01	51	2447	2236	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498883	GCA_001839105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/105/GCA_001839105.1_ASM183910v1	-	HMSC62A08
Prevotella sp. UBA4330	1947158	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.18384	48.9	-	DGTS01	41	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452806	GCA_002394385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/394/385/GCA_002394385.1_ASM239438v1	28894102	-
Mycobacterium sp. D16R18	1855663	PRJNA323571	323571	Terrabacteria group	Actinobacteria	4.99186	64.1	-	MAFD01	82	4940	4773	3/3/17	3/6/17	Contig	LNCC	SAMN05186784	GCA_002013775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/775/GCA_002013775.1_ASM201377v1	-	D16R18
Mycobacterium sp. D16Q20	1855660	PRJNA323571	323571	Terrabacteria group	Actinobacteria	4.85233	64.2	-	MAEZ01	77	4847	4555	3/3/17	3/6/17	Contig	LNCC	SAMN05186780	GCA_002013785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/785/GCA_002013785.1_ASM201378v1	-	D16Q20
Prevotella sp. UBA4268	1947155	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.14865	49	-	DGWC01	108	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456229	GCA_002395135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/135/GCA_002395135.1_ASM239513v1	28894102	-
Staphylococcus sp. HMSC62B09	1608884	PRJNA274536	274536	Terrabacteria group	Firmicutes	2.43688	32.5	-	LTMF01	100	2408	2244	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498873	GCA_001839115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/115/GCA_001839115.1_ASM183911v1	-	HMSC62B09
Clostridium sp. 28_12	1896980	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.49287	28.1	-	MNRR01	51	1470	1333	12/23/16	12/23/16	Scaffold	None	SAMN05717249	GCA_001916055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/055/GCA_001916055.1_ASM191605v1	27819664	-
Acinetobacter sp. WCHA39	2004648	PRJNA387062	387062	Proteobacteria	Gammaproteobacteria	3.37677	38.8	-	NHRP01	103	3342	3042	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN07138951	GCA_002165385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/385/GCA_002165385.1_ASM216538v1	-	WCHA39
Bacillus sp. 220_BSPC	1579346	PRJNA267549	267549	Terrabacteria group	Firmicutes	5.82606	40.3	-	JVPL01	323	5618	5325	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197413	GCA_001054655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/655/GCA_001054655.1_ASM105465v1	26230489	220_BSPC
Streptomyces sp. NRRL F-6677	1463879	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.11772	72.3	-	JOHP01	188	7167	6738	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645484	GCA_000719745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/745/GCA_000719745.1_ASM71974v1	-	NRRL F-6677
Pseudomonas sp. P1.31	1699311	PRJNA290438	290438	Proteobacteria	Gammaproteobacteria	6.27475	59	-	LHVN01	48	5646	5485	8/18/15	4/11/17	Contig	JLU	SAMN03891680	GCA_001269815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/815/GCA_001269815.1_ASM126981v1	-	P1.31
Enterobacter hormaechei	158836	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.95091	54.8	-	LPPR01	83	4878	4656	12/21/15	3/27/17	Contig	JCVI	SAMN04252917	GCA_001472515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/515/GCA_001472515.1_SMART_575.v1	-	SMART_575
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.15169	66.6	-	LPHD01	258	7579	7043	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449529	GCA_001531045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/045/GCA_001531045.1_ASM153104v1	-	MSMB2087WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.20932	64.2	-	FRZZ01	29	5229	5074	12/14/16	3/21/17	Contig	SC	SAMEA2068670	GCA_900131085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/085/GCA_900131085.1_10665_3_52	-	222
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.47076	57.2	-	JVXK01	351	5541	5250	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197206	GCA_001054225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/225/GCA_001054225.1_ASM105422v1	26230489	1240_ECLO
Campylobacter coli CVM 41965	1323655	PRJNA197357	197357	Proteobacteria	delta/epsilon subdivisions	1.7033	31.4	-	JAJI01	52	1754	1660	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887111	GCA_001419425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/425/GCA_001419425.1_Campylobacter_coli_CVM_41965_v1.0	-	CVM 41965
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.08809	60	-	FCJH01	14	4863	4705	1/21/16	3/27/17	Scaffold	SC	SAMEA2273998	GCA_001537625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/625/GCA_001537625.1_12082_3_27	-	2880STDY5682926
Lactobacillus plantarum	1590	PRJEB13384	325242	Terrabacteria group	Firmicutes	3.28767	44.4	-	FKLQ01	41	3201	3023	6/10/16	3/28/17	Contig	Handong Global University	SAMEA3924753	GCA_900080205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/205/GCA_900080205.1_lactobacillus_plantarum_BFE5092	-	-
Yersinia enterocolitica	630	PRJEB2116	203889	Proteobacteria	Gammaproteobacteria	5.60601	46.9	-	CTIY01	122	5259	5180	3/26/15	6/14/15	Scaffold	SC	SAMEA980171	GCA_001565915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/915/GCA_001565915.1_5103_7_1	-	YE02/02
Corynebacterium diphtheriae	1717	PRJNA341832	341832	Terrabacteria group	Actinobacteria	2.37632	53.3	-	MIOB01	47	2280	2113	11/10/16	8/24/17	Scaffold	National Institute for Communicable Diseases	SAMN05729417	GCA_001875875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/875/GCA_001875875.1_ASM187587v1	28726616	ST395-KZN-2015-45792
Thermosipho africanus TCF52B	484019	PRJNA27767	27767	Thermotogae	Thermotogae	2.01666	30.8	chromosome:NC_011653.1/CP001185.1	-	1	2006	1878	12/10/08	4/6/17	Complete Genome	Dalhousie University	SAMN02603170	GCA_000021285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/285/GCA_000021285.1_ASM2128v1	19124572	TCF52B
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15832	41.1	-	CWFV01	80	2104	1918	6/24/15	3/26/17	Contig	SC	SAMEA1032969	GCA_001178405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/405/GCA_001178405.1_6817_1_69	-	EQUI0022
Enterococcus faecium EnGen0263	1158553	PRJNA88825	88825	Terrabacteria group	Firmicutes	3.12996	37.8	-	AJAD01	29	3147	2910	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809102	GCA_000393735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/735/GCA_000393735.1_Ente_faec_UAA1280_V1	-	UAA1280
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.1521	52.4	-	CQLQ01	74	2511	2180	3/23/15	4/11/17	Contig	SC	SAMEA1677419	GCA_001153985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/985/GCA_001153985.1_8727_5_91	-	GCGS241
Streptococcus mutans	1309	PRJNA377637	377637	Terrabacteria group	Firmicutes	1.99038	36.8	-	NBFB01	40	1997	1884	6/30/17	7/3/17	Contig	Peking University School of Stomatology	SAMN06464156	GCA_002212855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/855/GCA_002212855.1_ASM221285v1	-	PKUSS-2
Enterococcus faecalis EnGen0356	1169302	PRJNA157775	157775	Terrabacteria group	Firmicutes	2.96671	37.4	-	ASDQ01	7	2963	2820	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847618	GCA_000393195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/195/GCA_000393195.1_Ente_faec_B-4-111_V1	-	B-4-111
Clostridium botulinum	1491	PRJNA353866	353866	Terrabacteria group	Firmicutes	4.2132	27.1	-	MWJC01	131	4000	3771	4/21/17	7/29/17	Contig	Northern Arizona University	SAMN06022743	GCA_002103935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/935/GCA_002103935.1_ASM210393v1	28733282	Bac-02-06430
Klebsiella pneumoniae MGH 48	1328380	PRJNA201963	201963	Proteobacteria	Gammaproteobacteria	5.45642	57.2	-	AYIT01	6	5426	5189	10/30/13	2/21/17	Scaffold	Broad Institute	SAMN02138588	GCA_000492755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/755/GCA_000492755.1_Kleb_pneu_MGH_48_V1	-	MGH 48
Vibrio parahaemolyticus S095	1394634	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.07406	45.3	-	AWKA01	452	4874	4624	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338948	GCA_000490445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/445/GCA_000490445.1_S095	-	S095
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.91	37.7	-	MLPF01	151	1923	1720	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297123	GCA_001869805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/805/GCA_001869805.1_ASM186980v1	27118061	AWRIB864
Brucella abortus	235	PRJNA284953	284953	Proteobacteria	Alphaproteobacteria	3.26681	57.2	-	LITW01	14	3355	3124	10/21/15	3/27/17	Contig	University of New Hampshire	SAMN03965479	GCA_001401945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/945/GCA_001401945.1_ASM140194v1	26679575	12183
Clostridioides difficile P2	1151394	PRJNA85963	85963	Terrabacteria group	Firmicutes	4.1959	28.4	-	AVLM01	202	3970	3785	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766694	GCA_000450945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/945/GCA_000450945.2_ASM45094v2	-	P2
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.94122	47.6	-	LBGA01	61	3732	3557	10/22/15	3/27/17	Scaffold	University of Alberta	SAMN03488010	GCA_001402425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/425/GCA_001402425.1_ASM140242v1	26454015	YB2G07
Bacillus thuringiensis serovar xiaguangiensis	180870	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.52369	34.8	-	MOOL01	84	6743	6267	5/17/17	6/15/17	Scaffold	Huazhong Agricultural University	SAMN05934523	GCA_002147905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/905/GCA_002147905.1_ASM214790v1	-	BGSC 4BN1
Burkholderia pseudomallei 354e	1086036	PRJNA73153	73153	Proteobacteria	Betaproteobacteria	7.11139	68.2	-	AHJD01	338	7417	6833	4/27/12	5/18/17	Contig	University of Washington	SAMN02471990	GCA_000259795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/795/GCA_000259795.1_ASM25979v1	22615773	354e
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.02348	66.9	-	MUUZ01	206	7743	7192	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001958	GCA_001993755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/755/GCA_001993755.1_ASM199375v1	-	VC8319
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.51389	50.8	-	FTWS01	362	5069	4303	1/28/17	2/26/17	Contig	SC	SAMEA2059491	GCA_900158715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/715/GCA_900158715.1_9803_4_71	-	2090STDY5488119
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.58042	38.2	-	FJCI01	38	3302	3141	2/20/16	3/27/17	Contig	SC	SAMEA2058470	GCA_900051695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/695/GCA_900051695.1_10771_1_67	-	2531STDY5467348
Pseudomonas syringae pv. actinidiae ICMP 9855	1194417	PRJNA167427	167427	Proteobacteria	Gammaproteobacteria	5.93109	58.8	-	AOKB01	375	5646	5209	7/1/13	3/24/17	Scaffold	The New Zealand Institute for Plant & Food Research Limited	SAMN02470789	GCA_000416665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/665/GCA_000416665.1_ASM41666v1	-	ICMP 9855
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03631	41.3	-	CEEY01	73	2033	1917	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233925	GCA_000940735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/735/GCA_000940735.1_Velvet_assembly	-	LS5C
Streptococcus agalactiae GB00601	1154923	PRJNA86519	86519	Terrabacteria group	Firmicutes	2.03878	35.2	-	ALTR01	21	2109	2003	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991174	GCA_000290315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/315/GCA_000290315.1_ASM29031v1	-	GB00601
Acinetobacter baumannii UMB002	933264	PRJNA60845	60845	Proteobacteria	Gammaproteobacteria	3.936	39	-	AEPL01	74	3770	3518	12/21/10	3/15/17	Contig	Institute for Genome Sciences	SAMN02435947	GCA_000184495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/184/495/GCA_000184495.2_ASM18449v2	21639920	UMB002
Pseudomonas aeruginosa BWHPSA022	1402522	PRJNA219883	219883	Proteobacteria	Gammaproteobacteria	6.91146	66	-	AXQG01	6	6621	6425	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360694	GCA_000481265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/265/GCA_000481265.1_Pseu_aeru_BWH022_V1	-	BWHPSA022
Shigella flexneri K-218	766146	PRJNA49071	49071	Proteobacteria	Gammaproteobacteria	4.92549	50.7	-	AFGV01	83	5590	5435	5/13/11	2/28/12	Contig	Institute for Genome Sciences	SAMN00792441	GCA_000213675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/675/GCA_000213675.2_ASM21367v2	-	K-218
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.89282	35	-	JQPM01	368	4467	4012	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949542	GCA_001568765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/765/GCA_001568765.1_ASM156876v1	26833181	56629
Streptococcus pyogenes ABC020060777	1439299	PRJNA232982	232982	Terrabacteria group	Firmicutes	1.80046	38.5	-	JJJH01	4	1810	1691	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567331	GCA_000631845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/845/GCA_000631845.1_Stre_pyog_ABC020060777_V1	-	ABC020060777
Neisseria meningitidis 70030	1095666	PRJNA76263	76263	Proteobacteria	Betaproteobacteria	2.25676	51.6	-	ANSH01	25	2631	2212	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055144	GCA_000328025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/025/GCA_000328025.2_ASM32802v2	-	70030
Helicobacter pylori HP260Bi	1159080	PRJNA89331	89331	Proteobacteria	delta/epsilon subdivisions	1.66774	39.2	-	APFC01	53	1654	1509	3/7/13	3/27/17	Scaffold	Washington University	SAMN02436704	GCA_000346025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/025/GCA_000346025.2_ASM34602v2	-	HP260Bi
Streptococcus pneumoniae GA19101	760798	PRJNA48753	48753	Terrabacteria group	Firmicutes	2.06613	39.7	-	AIKS01	17	2289	1995	3/7/12	3/8/17	Contig	Institute for Genome Sciences	SAMN00690872	GCA_000251585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/585/GCA_000251585.2_ASM25158v2	-	GA19101
Prochlorococcus marinus str. MIT 9515	167542	PRJNA13617	13617	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.70418	30.8	chromosome:NC_008817.1/CP000552.1	-	1	1854	1794	1/19/07	3/30/17	Complete Genome	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02603924	GCA_000015665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/665/GCA_000015665.1_ASM1566v1	18159947	MIT 9515
Mycobacterium tuberculosis PanR0906	1352594	PRJNA210071	210071	Terrabacteria group	Actinobacteria	4.39999	65.6	chromosome:NZ_CM002102.1/CM002102.1	ATSN01	1	4268	4093	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471073	GCA_000445855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/855/GCA_000445855.1_fedora0906c_IS	23884993	PanR0906
Mycobacterium avium subsp. hominissuis	439334	PRJNA344401	344401	Terrabacteria group	Actinobacteria	4.99085	68.7	-	MKCY01	236	4956	4282	9/15/17	9/18/17	Scaffold	Kobe Institute of Health	SAMN05821955	GCA_002304145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/145/GCA_002304145.1_ASM230414v1	28957464	OCU491
Bacillus cereus	1396	PRJNA243526	243526	Terrabacteria group	Firmicutes	5.47042	35.3	-	JMPX01	8	5894	5502	8/26/14	3/24/17	Scaffold	Los Alamos National Laboratory	SAMN02736988	GCA_000743865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/865/GCA_000743865.1_BDX	25301645	13061
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.71421	31.9	-	LWAY01	77	2770	2637	4/15/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04605648	GCA_001622685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/685/GCA_001622685.1_ASM162268v1	-	LRKNS037
Listeria monocytogenes LM605	1417987	PRJNA226607	226607	Terrabacteria group	Firmicutes	3.05832	37.9	-	AYPU01	45	3029	2953	4/26/16	3/1/17	Scaffold	Huazhong Agricultural University	SAMN03288758	GCA_001632225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/632/225/GCA_001632225.1_LM605_assembly	-	LM605
Yersinia pestis 2506	755864	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.48849	47.6	-	ADPA01	820	4236	4006	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02402996	GCA_000323225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/225/GCA_000323225.1_ASM32322v1	23271803	2506
Campylobacter jejuni subsp. jejuni LMG 23218	889240	PRJNA52905	52905	Proteobacteria	delta/epsilon subdivisions	1.67893	30.5	-	AIOB01	106	1762	1668	3/16/12	3/15/17	Contig	Cornell University	SAMN02429006	GCA_000254315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/315/GCA_000254315.2_ASM25431v2	-	LMG 23218
Prochlorococcus marinus subsp. pastoris str. CCMP1986	59919	PRJNA213	213	Terrabacteria group	Cyanobacteria/Melainabacteria group	1.65799	30.8	chromosome:NC_005072.1/BX548174.1	-	1	1847	1790	8/14/03	3/29/17	Complete Genome	DOE Joint Genome Institute	SAMEA3138209	GCA_000011465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/465/GCA_000011465.1_ASM1146v1	12917642	MED4
Staphylococcus aureus subsp. aureus TCH130	548474	PRJNA31541	31541	Terrabacteria group	Firmicutes	2.78	33.1	-	ACHD01	248	2835	2685	3/11/09	3/2/17	Scaffold	BCM	SAMN00001490	GCA_000159555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/555/GCA_000159555.1_ASM15955v1	-	TCH130
Staphylococcus aureus subsp. aureus 65-1322	585145	PRJNA34893	34893	Terrabacteria group	Firmicutes	2.80974	32.9	-	ACJS01	15	2900	2714	8/21/09	3/2/17	Scaffold	Broad Institute	SAMN02595313	GCA_000160355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/355/GCA_000160355.1_ASM16035v1	-	65-1322
Rickettsiales bacterium Ac37b	1528098	PRJNA256465	256465	Proteobacteria	Alphaproteobacteria	1.91756	30.7953	chromosome:NZ_CP009217.1/CP009217.2; plasmid 1:NZ_CP009218.1/CP009218.1; plasmid 2:NZ_CP009219.1/CP009219.1	-	3	1854	1786	8/29/14	4/10/17	Complete Genome	University of Minnesota	SAMN02943453	GCA_000746585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/585/GCA_000746585.2_ASM74658v2	-	Ac37b
Campylobacter jejuni subsp. jejuni LMG 23223	889241	PRJNA52907	52907	Proteobacteria	delta/epsilon subdivisions	1.6325	30.4	-	AIOC01	105	1720	1579	3/16/12	3/15/17	Contig	Cornell University	SAMN02428945	GCA_000254335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/335/GCA_000254335.2_ASM25433v2	-	LMG 23223
Yersinia pestis 30017	755867	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.59147	47.6	-	ADPC01	747	4323	4126	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02402998	GCA_000323285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/285/GCA_000323285.1_ASM32328v1	23271803	30017
Listeria monocytogenes	1639	PRJNA320339	320339	Terrabacteria group	Firmicutes	2.94805	37.8	-	LXQS01	46	2970	2903	6/6/16	3/1/17	Scaffold	CSIRO	SAMN04932622	GCA_001658145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/145/GCA_001658145.1_ASM165814v1	-	2939
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.74961	31.8	-	LWAZ01	79	2794	2660	4/15/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04605651	GCA_001622695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/695/GCA_001622695.1_ASM162269v1	-	LRKNS039
Bacillus cereus ATCC 4342	526977	PRJNA243585	243585	Terrabacteria group	Firmicutes	5.26231	35.3	-	JMPY01	2	5691	5303	9/2/14	4/10/17	Scaffold	Los Alamos National Laboratory	SAMN02739295	GCA_000746865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/865/GCA_000746865.1_BDY	25301645	ATCC 4342
Mycobacterium avium subsp. hominissuis	439334	PRJNA281695	281695	Terrabacteria group	Actinobacteria	5.63531	68.6	-	LBGZ01	168	5435	5019	9/15/17	9/18/17	Scaffold	Kobe Institute of Health	SAMN03494318	GCA_002304155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/155/GCA_002304155.1_ASM230415v1	28957464	OCU466
Mycobacterium tuberculosis PanR0907	1352595	PRJNA210072	210072	Terrabacteria group	Actinobacteria	4.40032	65.5499	chromosome:NZ_CM002103.1/CM002103.1	ATSO01	1	4267	4065	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471098	GCA_000445875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/875/GCA_000445875.1_fedora0907c_IS	23884993	PanR0907
Campylobacter jejuni	197	PRJNA376880	376880	Proteobacteria	delta/epsilon subdivisions	1.61259	30.7	chromosome:NZ_CP019965.1/CP019965.1	-	1	1659	1548	3/9/17	3/11/17	Complete Genome	University of Copenhagen	SAMN06449041	GCA_002024325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/325/GCA_002024325.1_ASM202432v1	-	NCTC12662
Streptococcus pneumoniae GA19923	760801	PRJNA48761	48761	Terrabacteria group	Firmicutes	2.09427	40	-	AIKC01	8	2286	1962	3/7/12	3/8/17	Contig	Institute for Genome Sciences	SAMN00668055	GCA_000251605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/605/GCA_000251605.2_ASM25160v2	-	GA19923
Helicobacter pylori GAMchJs114i	1159060	PRJNA89291	89291	Proteobacteria	delta/epsilon subdivisions	1.61191	39.3	-	APEJ01	52	1585	1429	3/15/13	3/27/17	Scaffold	Washington University	SAMN02436842	GCA_000346815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/815/GCA_000346815.2_ASM34681v2	-	GAMchJs114i
Neisseria meningitidis 77221	1095667	PRJNA76265	76265	Proteobacteria	Betaproteobacteria	2.27205	51.4	-	ANSG01	31	2613	2166	12/21/12	4/11/17	Contig	Institute for Genome Sciences	SAMN01055145	GCA_000328045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/045/GCA_000328045.2_ASM32804v2	-	77221
Streptococcus pyogenes ABC020056894	1439276	PRJNA232981	232981	Terrabacteria group	Firmicutes	1.77459	38.5	-	JJJI01	9	1764	1641	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567330	GCA_000631865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/865/GCA_000631865.1_Stre_pyog_ABC020056894_V1	-	ABC020056894
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.83594	35	-	JQPO01	367	4452	3991	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949544	GCA_001568775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/775/GCA_001568775.1_ASM156877v1	26833181	56634
Shigella flexneri K-227	766147	PRJNA49073	49073	Proteobacteria	Gammaproteobacteria	4.91902	50.7	-	AFGY01	81	5645	5494	5/13/11	2/28/12	Contig	Institute for Genome Sciences	SAMN00792442	GCA_000213735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/735/GCA_000213735.2_ASM21373v2	-	K-227
Pseudomonas aeruginosa BWHPSA021	1402521	PRJNA219882	219882	Proteobacteria	Gammaproteobacteria	6.48499	66.3	-	AXQH01	4	6131	5990	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360693	GCA_000481285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/285/GCA_000481285.1_Pseu_aeru_BWH021_V1	-	BWHPSA021
Acinetobacter baumannii WM99c	945555	PRJNA61917	61917	Proteobacteria	Gammaproteobacteria	4.0428	39.1	-	AERY01	162	3952	3743	1/25/11	3/15/17	Contig	Macquarie University	SAMN02470285	GCA_000186645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/645/GCA_000186645.2_ASM18664v2	22092679	WM99c
Streptococcus agalactiae GB00614	1154924	PRJNA86521	86521	Terrabacteria group	Firmicutes	2.14788	35.2	-	ALTS01	37	2201	2073	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991173	GCA_000290335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/335/GCA_000290335.1_ASM29033v1	-	GB00614
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04857	41.1	-	CELM01	80	2032	1946	2/20/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234079	GCA_000940755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/755/GCA_000940755.1_Velvet_assembly	-	S92L
Pseudomonas syringae pv. actinidiae ICMP 19068	1194407	PRJNA167433	167433	Proteobacteria	Gammaproteobacteria	6.09945	58.7	-	AOJX01	647	5785	5305	7/1/13	3/24/17	Scaffold	The New Zealand Institute for Plant & Food Research Limited	SAMN02470807	GCA_000416705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/705/GCA_000416705.1_ASM41670v1	-	ICMP 19068
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.62471	38.2	-	FJDU01	43	3334	3183	2/20/16	3/27/17	Contig	SC	SAMEA2058464	GCA_900051705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/705/GCA_900051705.1_10771_1_49	-	2531STDY5467330
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.45753	50.8	-	FTWT01	366	4900	4230	1/28/17	3/2/17	Contig	SC	SAMEA2056889	GCA_900158725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/725/GCA_900158725.1_9803_4_72	-	2090STDY5488120
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.0297	67	-	MUUY01	158	7707	7208	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001957	GCA_001993765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/765/GCA_001993765.1_ASM199376v1	-	VC7879
Burkholderia pseudomallei 354a	1086034	PRJNA73151	73151	Proteobacteria	Betaproteobacteria	7.17782	68.1	-	AGVS01	907	7681	6790	4/27/12	5/18/17	Contig	University of Washington	SAMN02471985	GCA_000259815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/815/GCA_000259815.1_ASM25981v1	22615773	354a
Bacillus thuringiensis serovar pirenaica	180863	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.51702	34.7	-	MOON01	118	6806	6314	5/17/17	5/24/17	Scaffold	Huazhong Agricultural University	SAMN05934529	GCA_002147955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/955/GCA_002147955.1_ASM214795v1	-	BGSC 4BU1
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.88685	47.6	-	LBGJ01	57	3658	3497	10/22/15	3/27/17	Scaffold	University of Alberta	SAMN03488019	GCA_001402435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/435/GCA_001402435.1_ASM140243v1	26454015	YB5A06
Clostridioides difficile P5	1151396	PRJNA85967	85967	Terrabacteria group	Firmicutes	4.04895	28.4	-	AVLO01	181	3807	3607	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766715	GCA_000450965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/965/GCA_000450965.2_ASM45096v2	-	P5
Brucella abortus	235	PRJNA284953	284953	Proteobacteria	Alphaproteobacteria	3.26753	57.2	-	LIUC01	19	3360	3139	10/21/15	3/27/17	Contig	University of New Hampshire	SAMN03965485	GCA_001401995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/401/995/GCA_001401995.1_ASM140199v1	26679575	8979.3
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.93805	38	-	MLPH01	241	2016	1782	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297125	GCA_001869815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/815/GCA_001869815.1_ASM186981v1	27118061	AWRIB868
Vibrio parahaemolyticus S094	1394633	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.05705	45.3	-	AWKB01	504	4851	4615	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338947	GCA_000490465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/465/GCA_000490465.1_S094	-	S094
Klebsiella pneumoniae MGH 46	1328378	PRJNA201961	201961	Proteobacteria	Gammaproteobacteria	5.67531	57	-	AYIU01	10	5581	5323	10/30/13	2/21/17	Scaffold	Broad Institute	SAMN02138586	GCA_000492775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/775/GCA_000492775.1_Kleb_pneu_MGH_46_V1	-	MGH 46
Clostridium botulinum	1491	PRJNA353866	353866	Terrabacteria group	Firmicutes	3.62453	27.1	-	MWJD01	16	3266	3118	4/21/17	7/29/17	Contig	Northern Arizona University	SAMN06022745	GCA_002103955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/955/GCA_002103955.1_ASM210395v1	28733282	Bac-04-16057
Enterococcus faecalis EnGen0357	1169303	PRJNA157777	157777	Terrabacteria group	Firmicutes	2.79183	37.6	-	ASDR01	8	2759	2639	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847619	GCA_000393215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/215/GCA_000393215.1_Ente_faec_Fly_2_V1	-	Fly 2
Streptococcus mutans	1309	PRJNA377637	377637	Terrabacteria group	Firmicutes	1.999	36.7	-	NBFD01	42	1998	1898	6/30/17	7/3/17	Contig	Peking University School of Stomatology	SAMN06464158	GCA_002212885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/885/GCA_002212885.1_ASM221288v1	-	PKUSS-4
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.15042	52.4	-	CQNA01	73	2520	2192	3/22/15	4/11/17	Contig	SC	SAMEA1690349	GCA_001154265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/265/GCA_001154265.1_8289_2_29	-	GCGS029
Enterococcus faecium EnGen0264	1158554	PRJNA88827	88827	Terrabacteria group	Firmicutes	2.93543	38.1	-	AJAE01	21	2983	2778	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809103	GCA_000393755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/755/GCA_000393755.1_Ente_faec_UAA1433_V1	-	UAA1433
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12604	41.2	-	CVZE01	74	2051	1876	6/24/15	3/26/17	Contig	SC	SAMEA1032970	GCA_001178425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/425/GCA_001178425.1_6903_2_14	-	EQUI0063
Tenacibaculum sp. LPB0136	1850252	PRJNA350758	350758	FCB group	Bacteroidetes/Chlorobi group	3.01921	30.7	chromosome:NZ_CP018155.1/CP018155.1	-	1	2777	2660	12/5/16	4/14/17	Complete Genome	Korea University	SAMN05945923	GCA_001889045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/045/GCA_001889045.1_ASM188904v1	-	LPB0136
Corynebacterium diphtheriae	1717	PRJNA341832	341832	Terrabacteria group	Actinobacteria	2.21867	53.6	-	MIYN01	91	2166	1981	11/10/16	8/24/17	Scaffold	National Institute for Communicable Diseases	SAMN05729422	GCA_001875905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/905/GCA_001875905.1_ASM187590v1	28726616	ST378-KZN-2015-45463
Lactobacillus plantarum	1590	PRJEB14693	388600	Terrabacteria group	Firmicutes	3.78764	44.1	-	FMBS01	693	3858	3346	6/2/17	6/12/17	Contig	IZSLER	SAMEA4361075	GCA_900095045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/045/GCA_900095045.1_Lp790	-	-
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.21747	59.8	-	FCGM01	15	5017	4848	1/21/16	3/27/17	Scaffold	SC	SAMEA2273903	GCA_001537645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/645/GCA_001537645.1_12082_2_39	-	2880STDY5682830
Campylobacter coli CVM 41970	1323654	PRJNA197356	197356	Proteobacteria	delta/epsilon subdivisions	1.79812	31.2	-	JAJH01	180	1842	1697	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887110	GCA_001419445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/445/GCA_001419445.1_Campylobacter_coli_CVM_41970_v1.0	-	CVM 41970
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.70112	56	-	JVSD01	51	4502	4351	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197343	GCA_001054435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/435/GCA_001054435.1_ASM105443v1	26230489	153_ECLO
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.26868	64.1	-	FSAA01	25	5343	5165	12/14/16	3/21/17	Contig	SC	SAMEA2071299	GCA_900131145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/145/GCA_900131145.1_10665_3_59	-	229
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.16701	67.4	-	LPHC01	111	6485	6139	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449528	GCA_001531085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/085/GCA_001531085.1_ASM153108v1	-	MSMB2085WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.17835	55.1	-	LPPO01	106	5233	4963	12/21/15	3/27/17	Contig	JCVI	SAMN04252920	GCA_001472535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/535/GCA_001472535.1_SMART_601.v1	-	SMART_601
Pseudomonas sp. MIACH	1078355	PRJNA290438	290438	Proteobacteria	Gammaproteobacteria	6.81586	60.7	-	LHVO01	73	6205	6015	8/18/15	4/11/17	Contig	JLU	SAMN03891681	GCA_001269925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/925/GCA_001269925.1_ASM126992v1	-	MIACH
Streptomyces sp. NRRL F-5135	1463858	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.02379	71.7	-	JOHR01	117	6988	6543	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645486	GCA_000719775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/775/GCA_000719775.1_ASM71977v1	-	NRRL F-5135
Bacillus sp. 522_BSPC	1579338	PRJNA267549	267549	Terrabacteria group	Firmicutes	5.14314	35.3	-	JVDT01	292	4912	4698	7/10/15	4/10/17	Scaffold	University of Washington	SAMN03197717	GCA_001076885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/885/GCA_001076885.1_ASM107688v1	26230489	522_BSPC
Acinetobacter sp. DSM 11652	346222	PRJEB16873	351010	Proteobacteria	Gammaproteobacteria	3.05128	38.7	-	FOBK01	39	2916	2776	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216500	GCA_900109815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/815/GCA_900109815.1_IMG-taxon_2651870317_annotated_assembly	-	DSM 11652
Clostridium sp. 28_17	1896981	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.53413	27.8	-	MNRS01	28	1410	1311	12/23/16	12/23/16	Scaffold	None	SAMN05717250	GCA_001916065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/065/GCA_001916065.1_ASM191606v1	27819664	-
Staphylococcus sp. HMSC62D11	1608886	PRJNA274538	274538	Terrabacteria group	Firmicutes	2.57465	33.8	-	LTME01	37	2440	2367	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498874	GCA_001839145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/145/GCA_001839145.1_ASM183914v1	-	HMSC62D11
Prevotella sp. UBA4249	1947154	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.16226	51.4	-	DGWV01	59	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455942	GCA_002395365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/365/GCA_002395365.1_ASM239536v1	28894102	-
Mycobacterium sp. IEC1808	1743230	PRJNA308282	308282	Terrabacteria group	Actinobacteria	6.11135	68.2	-	LQPV01	72	5844	5651	4/20/17	4/22/17	Contig	University of Trento	SAMN04216952	GCA_002101935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/935/GCA_002101935.1_ASM210193v1	25487637	IEC1808
Mycobacterium sp. TBL 1200985	1430326	PRJNA354248	354248	Terrabacteria group	Actinobacteria	5.22594	65.5	-	NCXP01	142	4715	4399	4/21/17	4/24/17	Contig	San Raffaele Scientific Institute	SAMN06651657	GCA_002104675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/675/GCA_002104675.1_ASM210467v1	-	TBL 1200985
Prevotella sp. UBA4294	1947156	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	3.30491	48.6	-	DGVC01	18	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452656	GCA_002395825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/395/825/GCA_002395825.1_ASM239582v1	28894102	-
Staphylococcus sp. HMSC64F10	1608888	PRJNA274540	274540	Terrabacteria group	Firmicutes	2.90313	32.6	-	LTMD01	83	3077	2943	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498875	GCA_001839155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/155/GCA_001839155.1_ASM183915v1	-	HMSC64F10
Clostridium sp. 29_15	1896982	PRJNA321218	321218	Terrabacteria group	Firmicutes	2.50761	28.9	-	MNRT01	43	2375	2228	12/23/16	12/23/16	Scaffold	None	SAMN05717251	GCA_001916075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/075/GCA_001916075.1_ASM191607v1	27819664	-
Acinetobacter sp. yr461	1761742	PRJEB16951	351078	Proteobacteria	Gammaproteobacteria	3.95977	38.6	-	FODU01	36	3847	3675	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487817	GCA_900110445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/445/GCA_900110445.1_IMG-taxon_2615840642_annotated_assembly	-	YR461
Bacillus sp. 445_BSPC	1581712	PRJNA267549	267549	Terrabacteria group	Firmicutes	6.08259	40.1	-	JVGU01	307	5913	5565	7/13/15	4/10/17	Scaffold	University of Washington	SAMN03197637	GCA_001077295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/295/GCA_001077295.1_ASM107729v1	26230489	445_BSPC
Streptomyces sp. NRRL S-1314	1463882	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.48983	72.6	-	JOHU01	169	6797	6443	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645489	GCA_000719785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/785/GCA_000719785.1_ASM71978v1	-	NRRL S-1314
Pseudomonas sp. RIT-PI-r	1699620	PRJNA292366	292366	Proteobacteria	Gammaproteobacteria	6.51898	59.3	-	LIGE01	49	5907	5709	9/22/15	4/11/17	Contig	Monash University Malaysia	SAMN03975648	GCA_001297015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/015/GCA_001297015.1_ASM129701v1	26586879	RIT-PI-r
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.19182	54.9	-	LPPN01	84	5113	4879	12/21/15	3/27/17	Contig	JCVI	SAMN04252921	GCA_001472575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/575/GCA_001472575.1_SMART_610.v1	-	SMART_610
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.91313	66.9	-	LPHE01	164	7287	6838	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449530	GCA_001531105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/105/GCA_001531105.1_ASM153110v1	-	MSMB2092WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.25297	64.1	-	FRZO01	26	5347	5166	12/14/16	3/21/17	Contig	SC	SAMEA2070542	GCA_900131155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/155/GCA_900131155.1_10665_3_60	-	230
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.78897	56	-	JVRK01	67	4588	4451	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197362	GCA_001054505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/505/GCA_001054505.1_ASM105450v1	26230489	171_ECLO
Campylobacter coli CVM 41971	1440017	PRJNA232276	232276	Proteobacteria	delta/epsilon subdivisions	1.69889	31.4	-	JAJS01	79	1776	1665	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887121	GCA_001419455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/455/GCA_001419455.1_Campylobacter_coli_CVM_41971_v1.0	-	CVM 41971
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.16766	59.9	-	FCIG01	17	4934	4763	1/21/16	3/27/17	Scaffold	SC	SAMEA2273954	GCA_001537665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/665/GCA_001537665.1_12082_2_85	-	2880STDY5682881
Lactobacillus plantarum	1590	PRJEB14693	388600	Terrabacteria group	Firmicutes	3.27405	44.5	-	FMBQ01	112	3235	3014	6/2/17	6/12/17	Contig	IZSLER	SAMEA4361077	GCA_900095055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/055/GCA_900095055.1_Lp998	-	-
Corynebacterium diphtheriae	1717	PRJNA341832	341832	Terrabacteria group	Actinobacteria	2.44275	53.6	-	MIOG01	64	2414	2212	11/10/16	8/24/17	Scaffold	National Institute for Communicable Diseases	SAMN05729423	GCA_001875925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/925/GCA_001875925.1_ASM187592v1	28726616	ST378-KZN-2015-45464
Flavobacteriaceae bacterium UJ101	1150389	PRJNA311623	311623	FCB group	Bacteroidetes/Chlorobi group	3.07421	30.7	chromosome:NZ_CP016269.1/CP016269.1	-	1	2711	2641	11/17/16	4/14/17	Complete Genome	Pukyong National University	SAMN04486749	GCA_001880285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/285/GCA_001880285.1_ASM188028v1	-	UJ101
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.0864	41.2	-	CWEQ01	73	1997	1825	6/23/15	3/26/17	Contig	SC	SAMEA1032971	GCA_001178445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/445/GCA_001178445.1_6903_8_58	-	EQUI0203
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.35031	67.2	-	DFPO01	93	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455541	GCA_002377295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/295/GCA_002377295.1_ASM237729v1	28894102	-
Enterococcus faecium EnGen0265	1158555	PRJNA88829	88829	Terrabacteria group	Firmicutes	3.20353	38	-	AJAF01	39	3260	3022	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809104	GCA_000393775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/775/GCA_000393775.1_Ente_faec_UAA1484_V1	-	UAA1484
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14616	52.4	-	CQOS01	69	2518	2187	3/23/15	4/10/17	Contig	SC	SAMEA1690382	GCA_001154625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/625/GCA_001154625.1_8727_8_73	-	GCGS169
Streptococcus mutans	1309	PRJNA377637	377637	Terrabacteria group	Firmicutes	1.98424	36.7	-	NBFE01	37	2002	1898	6/30/17	7/3/17	Contig	Peking University School of Stomatology	SAMN06464159	GCA_002212905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/905/GCA_002212905.1_ASM221290v1	-	PKUSS-5
Enterococcus faecalis EnGen0358	1169304	PRJNA157779	157779	Terrabacteria group	Firmicutes	3.06395	37.3	-	ASDS01	20	3136	2968	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847620	GCA_000393235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/235/GCA_000393235.1_Ente_faec_Merz151_V1	-	Merz151
Clostridium botulinum	1491	PRJNA353866	353866	Terrabacteria group	Firmicutes	3.88846	28	-	MWJE01	276	3815	3563	4/21/17	7/29/17	Contig	Northern Arizona University	SAMN06022746	GCA_002103975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/975/GCA_002103975.1_ASM210397v1	28733282	CDC 1656
Klebsiella pneumoniae MGH 36	1328372	PRJNA201951	201951	Proteobacteria	Gammaproteobacteria	5.56406	57.3	-	AYIZ01	6	5492	5243	10/30/13	2/21/17	Scaffold	Broad Institute	SAMN02138576	GCA_000492875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/875/GCA_000492875.1_Kleb_pneu_MGH_36_V1	-	MGH 36
Vibrio parahaemolyticus S093	1394632	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	4.95311	45.4	-	AWKC01	481	4715	4492	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338946	GCA_000490485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/485/GCA_000490485.1_S093	-	S093
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.10332	38	-	MLPI01	543	2140	1855	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297127	GCA_001869845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/845/GCA_001869845.1_ASM186984v1	27118061	AWRIB873
Brucella abortus	235	PRJNA284953	284953	Proteobacteria	Alphaproteobacteria	3.26345	57.2	-	LITY01	18	3353	3136	10/21/15	3/27/17	Contig	University of New Hampshire	SAMN03734747	GCA_001402005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/005/GCA_001402005.1_ASM140200v1	26679575	1046
Clostridioides difficile P28	1151410	PRJNA85995	85995	Terrabacteria group	Firmicutes	4.32342	44.1	-	AVMC01	81	4293	4044	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766698	GCA_000450985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/985/GCA_000450985.2_ASM45098v2	-	P28
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.88679	47.7	-	LBFW01	52	3611	3453	10/22/15	3/27/17	Scaffold	University of Alberta	SAMN03488006	GCA_001402535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/535/GCA_001402535.1_ASM140253v1	26454015	YB2A05
Bacillus thuringiensis serovar iberica	180866	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.32608	35	-	MOOP01	167	6750	6224	5/17/17	5/24/17	Scaffold	Huazhong Agricultural University	SAMN05934531	GCA_002147965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/147/965/GCA_002147965.1_ASM214796v1	-	BGSC 4BW1
Burkholderia pseudomallei MSHR1043	1247713	PRJNA178250	178250	Proteobacteria	Betaproteobacteria	7.22118	68.1	-	AOGU01	44	7454	6906	3/21/13	5/18/17	Contig	Menzies School of Health Research	SAMN02470546	GCA_000347975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/975/GCA_000347975.1_MSHR1043	23860767	MSHR1043
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.02123	66.9	-	MUVA01	308	7796	7224	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001960	GCA_001993795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/795/GCA_001993795.1_ASM199379v1	-	VC9444
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.53126	50.8	-	FTWU01	374	5085	4308	1/28/17	2/26/17	Contig	SC	SAMEA2055575	GCA_900158735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/735/GCA_900158735.1_9803_4_73	-	2090STDY5488121
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.44046	38.2	-	FJDV01	40	3150	2990	2/20/16	3/27/17	Contig	SC	SAMEA2065093	GCA_900051715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/715/GCA_900051715.1_10771_3_32	-	2531STDY5467409
Pseudomonas syringae pv. actinidiae ICMP 19097	1194395	PRJNA167406	167406	Proteobacteria	Gammaproteobacteria	6.16516	58.6	-	AOKN01	676	5903	5410	7/1/13	3/24/17	Scaffold	The New Zealand Institute for Plant & Food Research Limited	SAMN02470801	GCA_000416725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/725/GCA_000416725.1_ASM41672v1	-	ICMP 19097
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.1699	41	-	CEEH01	136	2165	2010	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233916	GCA_000941115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/115/GCA_000941115.1_Velvet_assembly	-	LS4B
Streptococcus agalactiae GB00640	1154925	PRJNA86523	86523	Terrabacteria group	Firmicutes	2.0771	35.3	-	ALTT01	17	2140	2050	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991172	GCA_000290355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/355/GCA_000290355.1_ASM29035v1	-	GB00640
Acinetobacter baumannii AB210	886886	PRJNA52391	52391	Proteobacteria	Gammaproteobacteria	4.06144	38.8	-	AEOX01	106	3996	3805	2/17/11	3/15/17	Contig	University of Birmingham	SAMN02471594	GCA_000189655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/655/GCA_000189655.2_ASM18965v2	21565804	AB210
Pseudomonas aeruginosa BWHPSA020	1402520	PRJNA219881	219881	Proteobacteria	Gammaproteobacteria	6.53162	66.3	-	AXQI01	24	6198	5986	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360692	GCA_000481305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/305/GCA_000481305.1_Pseu_aeru_BWH020_V1	-	BWHPSA020
Shigella flexneri K-304	766149	PRJNA49077	49077	Proteobacteria	Gammaproteobacteria	4.79035	50.6	-	AFGZ01	93	5434	5288	5/13/11	2/28/12	Contig	Institute for Genome Sciences	SAMN00792445	GCA_000213755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/213/755/GCA_000213755.2_ASM21375v2	-	K-304
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.81469	34.9	-	JQPR01	385	4439	3953	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949547	GCA_001568805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/805/GCA_001568805.1_ASM156880v1	26833181	56639
Streptococcus pyogenes ABC020056884	1439273	PRJNA232980	232980	Terrabacteria group	Firmicutes	1.82326	38.5	-	JJJJ01	6	1845	1737	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567329	GCA_000631885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/885/GCA_000631885.1_Stre_pyog_ABC020056884_V1	-	ABC020056884
Neisseria meningitidis 2001212	1095668	PRJNA76267	76267	Proteobacteria	Betaproteobacteria	2.21698	51.8	-	ANSF01	28	2589	2203	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055146	GCA_000328065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/065/GCA_000328065.2_ASM32806v2	-	2001212
Helicobacter pylori GAMchJs117Ai	1159061	PRJNA89293	89293	Proteobacteria	delta/epsilon subdivisions	1.61215	39.3	-	APEK01	49	1588	1441	3/15/13	3/27/17	Scaffold	Washington University	SAMN02436921	GCA_000346835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/835/GCA_000346835.2_ASM34683v2	-	GAMchJs117Ai
Streptococcus pneumoniae GA40028	760803	PRJNA48765	48765	Terrabacteria group	Firmicutes	2.09721	40	-	AILP01	14	2298	1955	3/7/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00738152	GCA_000251625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/625/GCA_000251625.2_ASM25162v2	-	GA40028
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.66833	30.7	chromosome:NZ_CP010480.1/CP010480.1	-	1	1773	1579	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246039	GCA_001506365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/365/GCA_001506365.1_ASM150636v1	-	CJ677CC524
Mycobacterium tuberculosis PanR0908	1352596	PRJNA210073	210073	Terrabacteria group	Actinobacteria	4.40005	65.4498	chromosome:NZ_CM002101.1/CM002101.1	ATSP01	1	4313	4078	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471055	GCA_000445895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/895/GCA_000445895.1_fedora0908c_IS	23884993	PanR0908
Mycobacterium avium subsp. hominissuis	439334	PRJNA329425	329425	Terrabacteria group	Actinobacteria	5.81176	68	-	MBFQ01	483	5889	4901	9/15/17	9/18/17	Scaffold	Kobe Institute of Health	SAMN05412760	GCA_002304195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/195/GCA_002304195.1_ASM230419v1	28957464	OCU462
Bacillus cereus	1396	PRJNA256220	256220	Terrabacteria group	Firmicutes	5.81258	34.8	-	JPYN01	36	6140	5763	11/7/14	3/25/17	Scaffold	Tennessee State University	SAMN02941309	GCA_000773635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/635/GCA_000773635.1_ASM77363v1	25523768	tsu1
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.55839	32	-	LWBA01	62	2596	2475	4/15/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04605653	GCA_001622705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/705/GCA_001622705.1_ASM162270v1	-	LRKNS042
Listeria monocytogenes	1639	PRJNA320339	320339	Terrabacteria group	Firmicutes	2.94746	37.8	-	LXQR01	34	2977	2908	6/6/16	3/1/17	Scaffold	CSIRO	SAMN04932621	GCA_001658155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/155/GCA_001658155.1_ASM165815v1	-	2937
Yersinia pestis 34008	755869	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.37574	48	-	ADPD01	1074	4132	3844	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02402999	GCA_000323305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/305/GCA_000323305.1_ASM32330v1	23271803	34008
Campylobacter jejuni subsp. jejuni LMG 23263	889242	PRJNA52909	52909	Proteobacteria	delta/epsilon subdivisions	1.74471	30.3	-	AIOD01	172	1850	1715	3/16/12	3/15/17	Contig	Cornell University	SAMN02429044	GCA_000254355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/355/GCA_000254355.2_ASM25435v2	-	LMG 23263
Campylobacter jejuni subsp. jejuni	32022	PRJNA275426	275426	Proteobacteria	delta/epsilon subdivisions	1.61238	30.7	chromosome:NZ_CP010906.1/CP010906.1	-	1	1660	1547	2/25/15	3/16/17	Complete Genome	University of Nottingham	SAMN03344735	GCA_000934305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/305/GCA_000934305.1_ASM93430v1	-	35925
Staphylococcus aureus subsp. aureus 68-397	585146	PRJNA34895	34895	Terrabacteria group	Firmicutes	2.80583	33	-	ACJT01	23	2912	2718	8/21/09	3/2/17	Scaffold	Broad Institute	SAMN02595314	GCA_000160375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/375/GCA_000160375.1_ASM16037v1	-	68-397
Staphylococcus aureus subsp. aureus E1410	585153	PRJNA34897	34897	Terrabacteria group	Firmicutes	2.83877	32.9	-	ACJU01	17	2955	2767	8/21/09	3/2/17	Scaffold	Broad Institute	SAMN02595315	GCA_000160395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/395/GCA_000160395.1_ASM16039v1	-	E1410
Bernardetia litoralis DSM 6794	880071	PRJNA51775	51775	FCB group	Bacteroidetes/Chlorobi group	4.91934	30.7	chromosome:NC_018018.1/CP003345.1	-	1	4049	3925	6/11/12	9/4/17	Complete Genome	JGI	SAMN02261370	GCA_000265505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/505/GCA_000265505.1_ASM26550v1	-	DSM 6794
Campylobacter jejuni subsp. jejuni 60004	889217	PRJNA52859	52859	Proteobacteria	delta/epsilon subdivisions	1.67541	30.3	-	AIOE01	143	1787	1679	3/16/12	3/15/17	Contig	Cornell University	SAMN02429007	GCA_000254375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/375/GCA_000254375.2_ASM25437v2	-	60004
Yersinia pestis 34202	755870	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.50495	47.7	-	ADPE01	1237	4371	3982	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403000	GCA_000323325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/325/GCA_000323325.1_ASM32332v1	23271803	34202
Listeria monocytogenes	1639	PRJNA320339	320339	Terrabacteria group	Firmicutes	3.11296	37.7	-	LXQQ01	43	3164	3098	6/6/16	3/1/17	Scaffold	CSIRO	SAMN04932620	GCA_001658165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/165/GCA_001658165.1_ASM165816v1	-	2919
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.64812	31.9	-	LWBB01	75	2671	2553	4/15/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04605708	GCA_001622715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/715/GCA_001622715.1_ASM162271v1	-	LRKNS046
Bacillus cereus	1396	PRJNA274235	274235	Terrabacteria group	Firmicutes	6.76492	34.9	-	LABV01	176	7150	6516	7/1/15	3/26/17	Scaffold	TU Muenchen	SAMN03325926	GCA_001044955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/955/GCA_001044955.1_ASM104495v1	26555390	6/27/S
Mycobacterium avium subsp. hominissuis	439334	PRJEB13431	320171	Terrabacteria group	Actinobacteria	5.10824	69.1	-	FKJO01	216	4870	4485	4/30/16	4/5/17	Scaffold	Scientific Institute of Public Health	SAMEA3925671	GCA_900079425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/425/GCA_900079425.1_12_067	-	-
Mycobacterium tuberculosis PanR0909	1352597	PRJNA210074	210074	Terrabacteria group	Actinobacteria	4.408	65.3995	chromosome:NZ_CM002100.1/CM002100.1	ATSQ01	1	4306	4056	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471056	GCA_000445915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/915/GCA_000445915.1_fedora0909_IS	23884993	PanR0909
Mycoplasma arthritidis 158L3-1	243272	PRJNA1422	1422	Terrabacteria group	Tenericutes	0.820453	30.7	chromosome:NC_011025.1/CP001047.1	-	1	665	619	6/25/08	4/17/17	Complete Genome	TIGR	SAMN02604019	GCA_000020065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/065/GCA_000020065.1_ASM2006v1	18573899	158L3-1
Streptococcus pneumoniae GA40183	760804	PRJNA48767	48767	Terrabacteria group	Firmicutes	2.13916	39.7	-	AIJX01	9	2322	2062	3/7/12	3/8/17	Contig	Institute for Genome Sciences	SAMN00717377	GCA_000251645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/645/GCA_000251645.2_ASM25164v2	-	GA40183
Helicobacter pylori GAMchJs124i	1159062	PRJNA89295	89295	Proteobacteria	delta/epsilon subdivisions	1.61226	39.3	-	APEL01	48	1578	1427	3/15/13	3/27/17	Scaffold	Washington University	SAMN02436790	GCA_000346855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/855/GCA_000346855.2_ASM34685v2	-	GAMchJs124i
Neisseria meningitidis NM3652	1095671	PRJNA76273	76273	Proteobacteria	Betaproteobacteria	2.19374	51.8	-	ANSC01	11	2540	2173	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055149	GCA_000328085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/085/GCA_000328085.2_ASM32808v2	-	NM3652
Streptococcus pyogenes ABC020047635	1439162	PRJNA232977	232977	Terrabacteria group	Firmicutes	1.81177	38.4	-	JJJK01	6	1845	1734	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567326	GCA_000631905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/905/GCA_000631905.1_Stre_pyog_ABC020047635_V1	-	ABC020047635
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.79229	35	-	JQPU01	405	4378	3892	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949571	GCA_001568815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/815/GCA_001568815.1_ASM156881v1	26833181	56649
Shigella flexneri K-404	766151	PRJNA49081	49081	Proteobacteria	Gammaproteobacteria	4.83658	50.6	-	AKMZ01	91	5618	5470	6/14/12	11/19/13	Contig	Institute for Genome Sciences	SAMN00017662	GCA_000268025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/025/GCA_000268025.1_ASM26802v1	-	K-404
Pseudomonas aeruginosa BWHPSA019	1402519	PRJNA219880	219880	Proteobacteria	Gammaproteobacteria	6.44428	66.3	-	AXQJ01	3	6083	5938	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360691	GCA_000481325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/325/GCA_000481325.1_Pseu_aeru_BWH019_V1	-	BWHPSA019
Acinetobacter baumannii 3990	886888	PRJNA52395	52395	Proteobacteria	Gammaproteobacteria	4.01501	38.8061	plasmid p1ABST2:NZ_AEOY01000095.1/AEOY01000095.1; plasmid p2ABST2:NZ_AEOY01000096.1/AEOY01000096.1	AEOY01	96	3891	3709	2/17/11	3/15/17	Contig	University of Birmingham	SAMN02471598	GCA_000189675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/675/GCA_000189675.2_ASM18967v2	21398548	3990
Streptococcus agalactiae GB00651	1154926	PRJNA86525	86525	Terrabacteria group	Firmicutes	2.0724	35.3	-	ALTU01	31	2154	2042	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991170	GCA_000290375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/375/GCA_000290375.1_ASM29037v1	-	GB00651
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.12427	41.1	-	CEDM01	124	2146	2013	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233897	GCA_000941235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/235/GCA_000941235.1_Velvet_assembly	-	LS1Q
Pseudomonas syringae pv. actinidiae ICMP 19094	1194401	PRJNA167411	167411	Proteobacteria	Gammaproteobacteria	6.28555	58.7	-	AOKJ01	497	5943	5418	7/1/13	3/24/17	Scaffold	The New Zealand Institute for Plant & Food Research Limited	SAMN02470793	GCA_000416745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/745/GCA_000416745.1_ASM41674v1	-	ICMP 19094
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.36249	38.3	-	FJER01	35	3086	2955	2/20/16	3/27/17	Contig	SC	SAMEA2065275	GCA_900051725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/725/GCA_900051725.1_10208_4_86	-	2531STDY5467463
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.729	50.8	-	FTWZ01	374	5283	4549	1/28/17	2/26/17	Contig	SC	SAMEA2055577	GCA_900158795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/795/GCA_900158795.1_9803_4_79	-	2090STDY5488127
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.13957	66.9	-	MUVE01	257	7874	7386	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001964	GCA_001993805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/805/GCA_001993805.1_ASM199380v1	-	VC6660
Burkholderia pseudomallei NCTC 13392	1262664	PRJNA182151	182151	Proteobacteria	Betaproteobacteria	7.16481	68.1	-	AOUG01	48	7402	6884	4/3/13	5/18/17	Contig	Northern Arizona University	SAMN01924847	GCA_000350505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/505/GCA_000350505.1_NCTC13392_merged	23704173	NCTC 13392
[Bacillus thuringiensis] serovar konkukian	180856	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.75281	35.1	-	MOOF01	320	7325	6668	5/17/17	6/15/17	Scaffold	Huazhong Agricultural University	SAMN05934494	GCA_002148025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/025/GCA_002148025.1_ASM214802v1	-	BGSC 4AH1
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	4.01437	47.5	-	LBGB01	47	3788	3609	10/22/15	3/27/17	Scaffold	University of Alberta	SAMN03488011	GCA_001402545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/545/GCA_001402545.1_ASM140254v1	26454015	YB3B05
Clostridioides difficile P23	1151407	PRJNA85989	85989	Terrabacteria group	Firmicutes	4.0385	28.3	-	AVLZ01	47	3738	3596	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01978911	GCA_000451065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/065/GCA_000451065.2_ASM45106v2	-	P23
Brucella abortus	235	PRJNA284953	284953	Proteobacteria	Alphaproteobacteria	3.26753	57.2	-	LITZ01	19	3360	3139	10/21/15	3/27/17	Contig	University of New Hampshire	SAMN03965482	GCA_001402025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/025/GCA_001402025.1_ASM140202v1	26679575	3272
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.02045	38	-	MLPM01	445	2022	1682	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297131	GCA_001869855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/855/GCA_001869855.1_ASM186985v1	27118061	AWRIB882
Vibrio parahaemolyticus S091	1394630	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.13859	45.3	-	AWKE01	753	5118	4619	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338944	GCA_000490515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/515/GCA_000490515.1_S091	-	S091
Klebsiella pneumoniae MGH 32	1328370	PRJNA201947	201947	Proteobacteria	Gammaproteobacteria	5.61128	57	-	AYJB01	4	5558	5307	10/30/13	2/21/17	Scaffold	Broad Institute	SAMN02138572	GCA_000492915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/915/GCA_000492915.1_Kleb_pneu_MGH_32_V1	-	MGH 32
Clostridium botulinum	1491	PRJNA353866	353866	Terrabacteria group	Firmicutes	3.94162	28	-	MWJF01	87	3780	3574	4/21/17	7/29/17	Contig	Northern Arizona University	SAMN06022747	GCA_002103985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/985/GCA_002103985.1_ASM210398v1	28733282	Prevot 1542
Enterococcus faecalis EnGen0370	1169305	PRJNA157781	157781	Terrabacteria group	Firmicutes	3.12235	37.4	-	ASDT01	13	3216	3012	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847621	GCA_000393255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/255/GCA_000393255.1_Ente_faec_SF339_V1	-	SF339
Streptococcus mutans	1309	PRJNA377637	377637	Terrabacteria group	Firmicutes	2.02447	36.9	-	NBFH01	65	2010	1892	6/30/17	7/3/17	Contig	Peking University School of Stomatology	SAMN06464162	GCA_002212925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/925/GCA_002212925.1_ASM221292v1	-	PKUSS-8
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.13142	52.5	-	CQMS01	77	2483	2179	3/23/15	4/11/17	Contig	SC	SAMEA1690320	GCA_001156005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/005/GCA_001156005.1_8727_8_46	-	GCGS142
Enterococcus faecium ATCC 8459	1158600	PRJNA88837	88837	Terrabacteria group	Firmicutes	2.87132	38	-	AJAJ01	9	2930	2707	5/3/13	4/10/17	Scaffold	Broad Institute	SAMN00809109	GCA_000393855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/855/GCA_000393855.1_Ente_faec_ATCC8459_V1	-	ATCC 8459
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.64907	65.7	-	DFRN01	155	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452983	GCA_002378285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/285/GCA_002378285.1_ASM237828v1	28894102	-
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.17218	41.2	-	CWBW01	83	2125	1948	6/24/15	3/26/17	Contig	SC	SAMEA1032973	GCA_001178465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/465/GCA_001178465.1_6903_5_73	-	EQUI0122
Campylobacter coli	195	PRJNA302283	302283	Proteobacteria	delta/epsilon subdivisions	2.12727	30.6402	chromosome:NZ_CP013733.1/CP013733.1; plasmid pOR12CC42:NZ_CP013736.1/CP013736.1; plasmid pOR12TET:NZ_CP013735.1/CP013735.1; plasmid pOR12Vir:NZ_CP013734.1/CP013734.1	-	4	2291	2166	1/4/16	3/19/17	Complete Genome	University of Nottingham	SAMN04271271	GCA_001483845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/483/845/GCA_001483845.1_ASM148384v1	-	OR12
Corynebacterium diphtheriae	1717	PRJNA341832	341832	Terrabacteria group	Actinobacteria	2.43792	53.6	-	MIOJ01	62	2396	2202	11/10/16	8/24/17	Scaffold	National Institute for Communicable Diseases	SAMN05729413	GCA_001875965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/965/GCA_001875965.1_ASM187596v1	28726616	ST378-KZN-2015-45786
Lactobacillus plantarum	1590	PRJEB14693	388600	Terrabacteria group	Firmicutes	3.41148	44.4	-	FMBR01	418	3397	3053	6/2/17	6/12/17	Contig	IZSLER	SAMEA4361076	GCA_900095065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/065/GCA_900095065.1_Lp813	-	-
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.08347	60	-	FCMD01	15	4827	4655	1/21/16	3/27/17	Scaffold	SC	SAMEA2273926	GCA_001537685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/685/GCA_001537685.1_12082_5_32	-	2880STDY5682853
Campylobacter coli CVM 41976	1440026	PRJNA232316	232316	Proteobacteria	delta/epsilon subdivisions	1.71337	31.4	-	JAKB01	47	1769	1673	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887127	GCA_001419525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/525/GCA_001419525.1_Campylobacter_coli_CVM_41976_v1.0	-	CVM 41976
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.93545	55.8	-	JVPP01	305	4840	4532	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197409	GCA_001054625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/625/GCA_001054625.1_ASM105462v1	26230489	217_ECLO
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98388	64.2	-	FRZW01	33	4951	4810	12/14/16	3/21/17	Contig	SC	SAMEA1965051	GCA_900131165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/165/GCA_900131165.1_10665_3_61	-	231
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.61908	67.2	-	LPFT01	124	7005	6618	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449493	GCA_001531435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/435/GCA_001531435.1_ASM153143v1	-	MSMB1508WGS
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.07845	54.7	-	LPPK01	85	5017	4775	12/21/15	3/27/17	Contig	JCVI	SAMN04252924	GCA_001472605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/605/GCA_001472605.1_SMART_661.v1	-	SMART_661
Pseudomonas sp. RIT-PI-q	1690247	PRJNA290683	290683	Proteobacteria	Gammaproteobacteria	7.44602	59.1	-	LHPC01	82	6824	6585	9/22/15	4/11/17	Contig	Monash University Malaysia	SAMN03895995	GCA_001297125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/125/GCA_001297125.1_ASM129712v1	26586879	RIT-PI-q
Streptomyces sp. NRRL F-5065	1463855	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.06295	73.5	-	JOHV01	229	6356	5923	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645490	GCA_000719815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/815/GCA_000719815.1_ASM71981v1	-	NRRL F-5065
Bacillus sp. FJAT-27238	1679167	PRJNA289030	289030	Terrabacteria group	Firmicutes	6.13483	47.4	-	LGJF01	1	5830	5487	7/21/15	4/10/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN03840765	GCA_001184755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/755/GCA_001184755.1_ASM118475v1	26404591	FJAT-27238
Acinetobacter sp. UNC434CL69Tsu2S25	1502768	PRJEB16885	350999	Proteobacteria	Gammaproteobacteria	4.09382	38.8	-	FOEA01	85	4079	3799	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02799632	GCA_900110525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/525/GCA_900110525.1_IMG-taxon_2593339129_annotated_assembly	-	UNC434CL69Tsu2S25
Clostridium sp. 42_12	1896983	PRJNA321218	321218	Terrabacteria group	Firmicutes	2.43978	42.3	-	MNRU01	89	2176	1950	12/23/16	12/23/16	Scaffold	None	SAMN05717252	GCA_001916115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/115/GCA_001916115.1_ASM191611v1	27819664	-
Staphylococcus sp. HMSC65H10	1608889	PRJNA274541	274541	Terrabacteria group	Firmicutes	2.77346	35.7	-	LTMC01	137	2668	2541	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498877	GCA_001839185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/185/GCA_001839185.1_ASM183918v1	-	HMSC65H10
Prevotella sp. UBA4296	1947157	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.82711	51.5	-	DGVA01	39	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452658	GCA_002396305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/396/305/GCA_002396305.1_ASM239630v1	28894102	-
Mycobacterium sp. CECT 8763	2015070	PRJNA391443	391443	Terrabacteria group	Actinobacteria	5.49605	66.7	-	NKCN01	76	5377	5199	8/10/17	8/12/17	Contig	Northumbria University	SAMN07269029	GCA_002245535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/535/GCA_002245535.1_ASM224553v1	-	CECT 8763
Mycobacterium sp. AB215	1841861	PRJEB19151	363030	Terrabacteria group	Actinobacteria	6.24895	65.9	-	FUEZ01	4	5827	5660	2/1/17	4/17/17	Contig	URMITE	SAMEA54001918	GCA_900157365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/365/GCA_900157365.1_PRJEB19151	-	AB215
Prevotella sp. UBA4952	1947166	PRJNA348753	348753	FCB group	Bacteroidetes/Chlorobi group	2.47139	44.4	-	DHAO01	102	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455151	GCA_002397475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/475/GCA_002397475.1_ASM239747v1	28894102	-
Staphylococcus sp. HMSC66A04	1608890	PRJNA274542	274542	Terrabacteria group	Firmicutes	2.86159	32.6	-	LTMB01	88	2991	2865	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498884	GCA_001839195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/195/GCA_001839195.1_ASM183919v1	-	HMSC66A04
Clostridium sp. 44_14	1896984	PRJNA321218	321218	Terrabacteria group	Firmicutes	2.81391	44.2	-	MNRV01	29	2485	2352	12/23/16	12/23/16	Scaffold	None	SAMN05717253	GCA_001916135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/135/GCA_001916135.1_ASM191613v1	27819664	-
Campylobacter jejuni	197	PRJNA394701	394701	Proteobacteria	delta/epsilon subdivisions	1.61613	30.6	chromosome:CP022551.1	-	1	1675	1477	8/1/17	8/1/17	Complete Genome	Kingston University	SAMN07357615	GCA_002238355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/355/GCA_002238355.1_ASM223835v1	-	81-176_G1_B7
Bacillus sp. FJAT-26652	1684141	PRJNA290127	290127	Terrabacteria group	Firmicutes	4.77159	43.2	-	LIGF01	13	4920	4705	8/25/15	4/11/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN03853465	GCA_001273895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/895/GCA_001273895.1_ASM127389v1	-	FJAT-26652
Streptomyces sp. NRRL F-4474	1463851	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.88226	72.5	-	JOIB01	131	7141	6786	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645496	GCA_000719855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/855/GCA_000719855.1_ASM71985v1	-	NRRL F-4474
Pseudomonas sp. RIT-PI-o	1690246	PRJNA290682	290682	Proteobacteria	Gammaproteobacteria	6.10366	60	-	LHPA01	54	5462	5304	9/22/15	4/11/17	Contig	Monash University Malaysia	SAMN03895994	GCA_001297215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/215/GCA_001297215.1_ASM129721v1	26586879	RIT-PI-o
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.7485	55.6	-	LPPJ01	44	4602	4449	12/21/15	3/27/17	Contig	JCVI	SAMN04252925	GCA_001472635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/635/GCA_001472635.1_SMART_685.v1	-	SMART_685
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.53298	67.1	-	LPHH01	210	6874	6395	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449533	GCA_001531515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/515/GCA_001531515.1_ASM153151v1	-	MSMB2098WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.2695	64.1	-	FRZV01	30	5353	5162	12/14/16	3/21/17	Contig	SC	SAMEA2071300	GCA_900131175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/175/GCA_900131175.1_10665_3_62	-	232
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.02452	56.2	-	JVIB01	66	4923	4707	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197605	GCA_001055075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/075/GCA_001055075.1_ASM105507v1	26230489	414_ECLO
Campylobacter coli CVM 41986	1323656	PRJNA197358	197358	Proteobacteria	delta/epsilon subdivisions	1.73738	31.3	-	JAJJ01	35	1808	1704	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887112	GCA_001419545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/545/GCA_001419545.1_Campylobacter_coli_CVM_41986_v1.0	-	CVM 41986
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.19853	59.9	-	FCLL01	23	5013	4853	1/21/16	3/27/17	Scaffold	SC	SAMEA2274058	GCA_001537705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/705/GCA_001537705.1_12082_3_82	-	2880STDY5682986
Lactobacillus plantarum	1590	PRJEB22014	399292	Terrabacteria group	Firmicutes	3.18098	44.6	-	FZSL01	189	3320	2806	8/22/17	8/28/17	Contig	UNIVERSITY OF OSLO	SAMEA104188795	GCA_900200135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/200/135/GCA_900200135.1_2003wt_genome_assembly	-	-
Corynebacterium diphtheriae	1717	PRJNA341832	341832	Terrabacteria group	Actinobacteria	2.44031	53.6	-	MIOK01	70	2399	2199	11/10/16	8/24/17	Scaffold	National Institute for Communicable Diseases	SAMN05729426	GCA_001875975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/975/GCA_001875975.1_ASM187597v1	28726616	ST378-KZN-2015-45785
Campylobacter jejuni	197	PRJNA394645	394645	Proteobacteria	delta/epsilon subdivisions	1.6485	30.6	chromosome:CP022559.1	-	1	1725	1549	8/1/17	8/1/17	Complete Genome	Kingston University	SAMN07357073	GCA_002238375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/375/GCA_002238375.1_ASM223837v1	-	11168H/araE
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.16911	41.2	-	CVXI01	86	2143	1926	6/23/15	3/26/17	Contig	SC	SAMEA1032974	GCA_001178485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/485/GCA_001178485.1_6817_1_53	-	EQUI0006
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.13165	66.4	-	DFRU01	291	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453724	GCA_002378345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/345/GCA_002378345.1_ASM237834v1	28894102	-
Enterococcus faecium EnGen0267	1158635	PRJNA88897	88897	Terrabacteria group	Firmicutes	2.69642	38.2	-	AJBN01	17	2771	2485	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809142	GCA_000394415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/415/GCA_000394415.1_Ente_faec_UAA210_V1	-	UAA210
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.14294	52.4	-	CQHY01	79	2507	2186	3/23/15	4/10/17	Contig	SC	SAMEA1677343	GCA_001156065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/065/GCA_001156065.1_8727_5_87	-	GCGS237
Streptococcus mutans	1309	PRJNA377637	377637	Terrabacteria group	Firmicutes	2.00435	36.6	-	NBFK01	54	2006	1905	6/30/17	7/3/17	Contig	Peking University School of Stomatology	SAMN06464165	GCA_002212965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/965/GCA_002212965.1_ASM221296v1	-	PKUSS-11
Enterococcus faecalis EnGen0368	1169306	PRJNA157783	157783	Terrabacteria group	Firmicutes	2.99652	37.7	-	ASDU01	7	3004	2823	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847622	GCA_000393275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/275/GCA_000393275.1_Ente_faec_Com7_V1	-	Com7
Clostridium botulinum	1491	PRJNA353866	353866	Terrabacteria group	Firmicutes	3.96387	28	-	MWJH01	87	3816	3629	4/21/17	7/29/17	Contig	Northern Arizona University	SAMN06022749	GCA_002104015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/015/GCA_002104015.1_ASM210401v1	28733282	SU1033
Klebsiella pneumoniae MGH 30	1328368	PRJNA201945	201945	Proteobacteria	Gammaproteobacteria	5.54349	57.1	-	AYJC01	8	5587	5303	10/30/13	2/21/17	Scaffold	Broad Institute	SAMN02138570	GCA_000492935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/935/GCA_000492935.1_Kleb_pneu_MGH_30_V1	-	MGH 30
Vibrio parahaemolyticus S090	1394629	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.04087	45.3	-	AWKF01	734	4898	4525	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338943	GCA_000490535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/535/GCA_000490535.1_S090	-	S090
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.93503	38	-	MLPN01	228	2000	1788	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297132	GCA_001869885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/885/GCA_001869885.1_ASM186988v1	27118061	AWRIB883
Brucella abortus	235	PRJNA284953	284953	Proteobacteria	Alphaproteobacteria	3.26152	57.2	-	LIUA01	16	3348	3121	10/21/15	3/27/17	Contig	University of New Hampshire	SAMN03965483	GCA_001402055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/055/GCA_001402055.1_ASM140205v1	26679575	5586
Clostridioides difficile P24	1151408	PRJNA85991	85991	Terrabacteria group	Firmicutes	4.25479	28.3	-	AVMA01	56	4042	3881	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766697	GCA_000451085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/085/GCA_000451085.2_ASM45108v2	-	P24
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.92724	47.6	-	LBGG01	54	3712	3547	10/22/15	3/27/17	Scaffold	University of Alberta	SAMN03488016	GCA_001402575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/575/GCA_001402575.1_ASM140257v1	26454015	YB4G05
Bacillus thuringiensis serovar jegathesan	56955	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.39113	34.9	-	MOOS01	204	6854	6379	5/17/17	5/24/17	Scaffold	Huazhong Agricultural University	SAMN05934540	GCA_002148045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/045/GCA_002148045.1_ASM214804v1	-	BGSC 4CF1
Burkholderia pseudomallei VEL	1290417	PRJNA188493	188493	Proteobacteria	Betaproteobacteria	6.43973	67.9	-	APLI01	1024	7016	6094	5/22/13	3/24/17	Contig	"Universiti Malaya, Kuala Lumpur"	SAMN02471835	GCA_000401035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/035/GCA_000401035.1_B.pseudomallei_VEL	-	VEL
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.67833	67	-	MUVJ01	200	7387	6847	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001971	GCA_001993825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/825/GCA_001993825.1_ASM199382v1	-	VC4477
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.48614	50.8	-	FTXB01	380	5019	4246	1/28/17	2/26/17	Contig	SC	SAMEA1973513	GCA_900158815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/815/GCA_900158815.1_9803_4_81	-	2090STDY5488129
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.48267	38.3	-	FJGV01	31	3180	3070	2/20/16	3/27/17	Contig	SC	SAMEA2080611	GCA_900051735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/735/GCA_900051735.1_10625_2_26	-	2532STDY5467499
Pseudomonas syringae pv. actinidiae ICMP 19095	1194403	PRJNA167412	167412	Proteobacteria	Gammaproteobacteria	6.20098	58.7	-	AOKI01	739	5941	5274	7/1/13	3/24/17	Scaffold	The New Zealand Institute for Plant & Food Research Limited	SAMN02470792	GCA_000416765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/765/GCA_000416765.1_ASM41676v1	-	ICMP 19095
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.09241	41.5	-	CEIL01	65	2000	1898	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234019	GCA_000941275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/275/GCA_000941275.1_Velvet_assembly	-	S15W
Streptococcus agalactiae GB00654	1154928	PRJNA86529	86529	Terrabacteria group	Firmicutes	2.03531	35.3	-	ALTW01	32	2135	1994	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991169	GCA_000290395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/395/GCA_000290395.1_ASM29039v1	-	GB00654
Acinetobacter baumannii 3909	886889	PRJNA52397	52397	Proteobacteria	Gammaproteobacteria	3.95483	38.8893	plasmid p1ABST78:NZ_AEOZ01000236.1/AEOZ01000236.1	AEOZ01	236	3815	3524	2/17/11	3/15/17	Contig	University of Birmingham	SAMN02471606	GCA_000189695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/695/GCA_000189695.2_ASM18969v2	21398548	3909
Pseudomonas aeruginosa BWHPSA018	1402518	PRJNA219879	219879	Proteobacteria	Gammaproteobacteria	6.64725	66.1	-	AXQK01	9	6333	6157	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360690	GCA_000481345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/345/GCA_000481345.1_Pseu_aeru_BWH018_V1	-	BWHPSA018
Shigella flexneri 1235-66	766154	PRJNA49089	49089	Proteobacteria	Gammaproteobacteria	8.71785	51.4	-	AKNF01	1336	10486	10313	6/14/12	11/19/13	Contig	Institute for Genome Sciences	SAMN01758314	GCA_000268065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/065/GCA_000268065.1_ASM26806v1	-	1235-66
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.60522	34.9	-	JQPX01	248	4182	3703	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949555	GCA_001568845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/845/GCA_001568845.1_ASM156884v1	26833181	56653
Streptococcus pyogenes ABC020047506	1439159	PRJNA232976	232976	Terrabacteria group	Firmicutes	1.80784	38.4	-	JJJL01	3	1794	1688	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567325	GCA_000631925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/925/GCA_000631925.1_Stre_pyog_ABC020047506_V1	-	ABC020047506
Neisseria meningitidis 2004090	1095677	PRJNA76285	76285	Proteobacteria	Betaproteobacteria	2.20871	51.8	-	ANRW01	21	2580	2195	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055156	GCA_000328105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/105/GCA_000328105.2_ASM32810v2	-	2004090
Helicobacter pylori GAMchJs136i	1159064	PRJNA89299	89299	Proteobacteria	delta/epsilon subdivisions	1.65517	39.2	-	APEM01	62	1638	1483	3/15/13	3/27/17	Scaffold	Washington University	SAMN02436843	GCA_000346875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/875/GCA_000346875.2_ASM34687v2	-	GAMchJs136i
Streptococcus pneumoniae GA40410	760805	PRJNA48769	48769	Terrabacteria group	Firmicutes	2.1191	39.7	-	AIKA01	21	2318	2010	3/7/12	3/8/17	Contig	Institute for Genome Sciences	SAMN00632908	GCA_000251665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/665/GCA_000251665.2_ASM25166v2	-	GA40410
Campylobacter jejuni	197	PRJNA394649	394649	Proteobacteria	delta/epsilon subdivisions	1.64565	30.6	chromosome:NZ_CP022439.1/CP022439.1	-	1	1719	1618	7/24/17	7/28/17	Complete Genome	Kingston University	SAMN07357094	GCA_002224325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/325/GCA_002224325.1_ASM222432v1	-	11168H/lacY
Mycobacterium tuberculosis PanR1007	1352599	PRJNA210076	210076	Terrabacteria group	Actinobacteria	4.39836	65.4995	chromosome:NZ_CM002098.1/CM002098.1	ATSR01	1	4232	4054	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471072	GCA_000445935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/935/GCA_000445935.1_fedora1007_IS	23884993	PanR1007
Mycobacterium avium subsp. hominissuis	439334	PRJEB13431	320171	Terrabacteria group	Actinobacteria	5.09457	69.1	-	FKJL01	175	4883	4547	4/30/16	4/5/17	Scaffold	Scientific Institute of Public Health	SAMEA3925670	GCA_900079485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/485/GCA_900079485.1_12_062	-	-
Bacillus cereus	1396	PRJNA322638	322638	Terrabacteria group	Firmicutes	6.40408	34.8	-	LYVD01	54	6551	6022	7/1/16	3/28/17	Scaffold	Yale University	SAMN05171626	GCA_001678165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/165/GCA_001678165.1_ASM167816v1	-	UW85
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.75279	31.8	-	LWBD01	69	2810	2666	4/15/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04605711	GCA_001622755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/755/GCA_001622755.1_ASM162275v1	-	LRKNS050
Listeria monocytogenes	1639	PRJNA320339	320339	Terrabacteria group	Firmicutes	3.03703	37.8	-	LXQP01	50	3079	3004	6/6/16	3/1/17	Scaffold	CSIRO	SAMN04932619	GCA_001658175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/175/GCA_001658175.1_ASM165817v1	-	2882
Yersinia pestis 351001	755871	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.43385	48	-	ADPF01	1332	4256	3908	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403001	GCA_000323345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/345/GCA_000323345.1_ASM32334v1	23271803	351001
Campylobacter jejuni subsp. jejuni LMG 23264	889243	PRJNA52911	52911	Proteobacteria	delta/epsilon subdivisions	1.72085	30.4	-	AIOF01	147	1850	1739	3/16/12	3/15/17	Contig	Cornell University	SAMN02429008	GCA_000254395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/395/GCA_000254395.2_ASM25439v2	-	LMG 23264
Campylobacter jejuni	197	PRJNA394665	394665	Proteobacteria	delta/epsilon subdivisions	1.6203	30.6	chromosome:NZ_CP022440.1/CP022440.1	-	1	1676	1542	7/24/17	7/28/17	Complete Genome	Kingston University	SAMN07357174	GCA_002224385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/385/GCA_002224385.1_ASM222438v1	-	81-176_G1_B0
Staphylococcus aureus subsp. aureus M876	585158	PRJNA34899	34899	Terrabacteria group	Firmicutes	2.79131	32.9	-	ACJV01	16	2892	2720	8/21/09	3/2/17	Scaffold	Broad Institute	SAMN02595316	GCA_000160415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/415/GCA_000160415.1_ASM16041v1	-	M876
Staphylococcus aureus subsp. aureus C101	585149	PRJNA39227	39227	Terrabacteria group	Firmicutes	2.80619	32.9	-	ACSP01	21	2908	2747	12/9/09	3/2/17	Scaffold	Broad Institute	SAMN02595338	GCA_000162595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/595/GCA_000162595.1_ASM16259v1	-	C101
Campylobacter jejuni subsp. jejuni	32022	PRJNA231221	231221	Proteobacteria	delta/epsilon subdivisions	1.62045	30.6	chromosome:NZ_CP022080.1/CP022080.1	-	1	1675	1576	6/27/17	6/29/17	Complete Genome	US Food and Drug Administration 	SAMN04875592	GCA_002209065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/065/GCA_002209065.1_ASM220906v1	-	FDAARGOS_266
Campylobacter jejuni subsp. jejuni LMG 23269	889244	PRJNA52913	52913	Proteobacteria	delta/epsilon subdivisions	1.6284	30.5	-	AIOG01	124	1744	1627	3/16/12	3/15/17	Contig	Cornell University	SAMN02428961	GCA_000254415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/415/GCA_000254415.2_ASM25441v2	-	LMG 23269
Yersinia pestis 42013	755875	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.4951	47.6	-	ADPG01	877	4252	3994	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403002	GCA_000323365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/365/GCA_000323365.1_ASM32336v1	23271803	42013
Listeria monocytogenes	1639	PRJNA320339	320339	Terrabacteria group	Firmicutes	3.0845	37.9	-	LXQT01	81	3121	3034	6/6/16	3/1/17	Scaffold	CSIRO	SAMN04932623	GCA_001658225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/225/GCA_001658225.1_ASM165822v1	-	2945
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.68691	31.9	-	LWBC01	110	2742	2603	4/15/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04605709	GCA_001622785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/785/GCA_001622785.1_ASM162278v1	-	LRKNS048
Bacillus cereus	1396	PRJNA335430	335430	Terrabacteria group	Firmicutes	5.37381	35.4	-	MSMO01	16	5839	5347	1/5/17	3/28/17	Scaffold	NBACC	SAMN05442526	GCA_001936485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/485/GCA_001936485.1_ASM193648v1	-	ISSFR-23F
Mycobacterium avium subsp. hominissuis	439334	PRJEB13431	320171	Terrabacteria group	Actinobacteria	5.30777	69	-	FKJM01	199	5042	4704	4/30/16	4/5/17	Scaffold	Scientific Institute of Public Health	SAMEA3925669	GCA_900079545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/545/GCA_900079545.1_LYM086	-	-
Mycobacterium tuberculosis PanR1101	1352600	PRJNA210077	210077	Terrabacteria group	Actinobacteria	4.36969	65.4498	chromosome:NZ_CM002099.1/CM002099.1	ATSS01	1	4292	4038	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471057	GCA_000445955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/955/GCA_000445955.1_fedora1101e_IS	23884993	PanR1101
Acidianus manzaensis	282676	PRJNA380321	380321	TACK group	Crenarchaeota	2.68746	30.6	chromosome:CP020477.1	-	1	2755	2644	5/1/17	5/1/17	Complete Genome	"Cental South University, China"	SAMN06640543	GCA_002116695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/116/695/GCA_002116695.1_ASM211669v1	-	YN-25
Streptococcus pneumoniae GA40563	760806	PRJNA48771	48771	Terrabacteria group	Firmicutes	2.11416	39.6	-	AIKT01	19	2325	2027	3/7/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00717550	GCA_000251685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/685/GCA_000251685.2_ASM25168v2	-	GA40563
Helicobacter pylori GAM117Ai	1159026	PRJNA89223	89223	Proteobacteria	delta/epsilon subdivisions	1.64473	39.2	-	AWER01	60	1626	1441	8/28/13	3/24/17	Scaffold	Washington University	SAMN02436822	GCA_000455765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/765/GCA_000455765.1_ASM45576v1	-	GAM117Ai
Neisseria meningitidis 12888	1095680	PRJNA76291	76291	Proteobacteria	Betaproteobacteria	2.26571	51.4	-	ANRT01	40	2618	2236	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055161	GCA_000328125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/125/GCA_000328125.2_ASM32812v2	-	12888
Streptococcus pyogenes ABC020047086	1439153	PRJNA232975	232975	Terrabacteria group	Firmicutes	1.79017	38.5	-	JJJM01	5	1801	1680	4/14/14	3/24/17	Scaffold	Broad Institute	SAMN02567324	GCA_000631945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/945/GCA_000631945.1_Stre_pyog_ABC020047086_V1	-	ABC020047086
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.85184	34.9	-	JQPV01	379	4454	3979	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949549	GCA_001568855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/855/GCA_001568855.1_ASM156885v1	26833181	56651
Shigella flexneri K-315	766150	PRJNA49079	49079	Proteobacteria	Gammaproteobacteria	4.56484	51.1	-	AKMY01	79	5147	4996	6/14/12	11/19/13	Contig	Institute for Genome Sciences	SAMN00113465	GCA_000268165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/165/GCA_000268165.1_ASM26816v1	-	K-315
Pseudomonas aeruginosa BWHPSA017	1402517	PRJNA219878	219878	Proteobacteria	Gammaproteobacteria	6.93454	66	-	AXQL01	5	6546	6329	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360689	GCA_000481365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/365/GCA_000481365.1_Pseu_aeru_BWH017_V1	-	BWHPSA017
Acinetobacter baumannii Naval-81	903898	PRJNA53395	53395	Proteobacteria	Gammaproteobacteria	4.08087	38.9676	plasmid pNaval81-13:NZ_AFDB02000005.1/AFDB02000005.1; plasmid pNaval81-26:NZ_AFDB02000003.1/AFDB02000003.1; plasmid pNaval81-67:NZ_AFDB02000004.1/AFDB02000004.1	AFDB02	5	3999	3737	5/24/11	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00114928	GCA_000214985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/985/GCA_000214985.2_gacin10v1.0	-	Naval-81
Streptococcus agalactiae GB00653	1154927	PRJNA86527	86527	Terrabacteria group	Firmicutes	2.17227	35.3	-	ALTV01	43	2249	2143	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991171	GCA_000290415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/415/GCA_000290415.1_ASM29041v1	-	GB00653
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04346	41.2	-	CEHA01	68	2024	1921	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234089	GCA_000941295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/295/GCA_000941295.1_Velvet_assembly	-	S96H
Pseudomonas syringae pv. actinidiae ICMP 18883	1194402	PRJNA167413	167413	Proteobacteria	Gammaproteobacteria	6.30976	58.7	-	AOKH01	415	5944	5467	7/1/13	3/27/17	Scaffold	The New Zealand Institute for Plant & Food Research Limited	SAMN02470791	GCA_000416785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/785/GCA_000416785.2_ASM41678v2	-	ICMP 18883
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.45211	38.3	-	FJMK01	33	3160	3020	2/20/16	3/27/17	Contig	SC	SAMEA2078032	GCA_900051755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/755/GCA_900051755.1_10625_3_79	-	2532STDY5467648
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.4756	50.8	-	FTXD01	370	5038	4250	1/28/17	2/26/17	Contig	SC	SAMEA1967582	GCA_900158825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/825/GCA_900158825.1_9803_4_82	-	2090STDY5488130
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.49177	67	-	MUVM01	188	7194	6684	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001974	GCA_001993855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/855/GCA_001993855.1_ASM199385v1	-	VC5506
Burkholderia pseudomallei 406e	360118	PRJNA192967	192967	Proteobacteria	Betaproteobacteria	7.2359	68.1	-	AQTK01	115	7441	6879	6/13/13	3/24/17	Contig	Northern Arizona University	SAMN01985492	GCA_000410895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/895/GCA_000410895.1_406e_combined	-	406e
Bacillus thuringiensis serovar zhaodongensis	180896	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.24047	35	-	MOOR01	125	6724	6293	5/17/17	5/24/17	Scaffold	Huazhong Agricultural University	SAMN05934534	GCA_002148065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/065/GCA_002148065.1_ASM214806v1	-	BGSC 4BZ1
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	4.03909	47.4	-	LBGI01	67	3891	3696	10/22/15	3/27/17	Scaffold	University of Alberta	SAMN03488018	GCA_001402585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/585/GCA_001402585.1_ASM140258v1	26454015	YB4H02
Clostridioides difficile P25	1151409	PRJNA85993	85993	Terrabacteria group	Firmicutes	4.27636	28.4	-	AVMB01	22	3996	3853	8/20/13	4/10/17	Contig	Institute for Genome Sciences	SAMN01978918	GCA_000451105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/105/GCA_000451105.2_ASM45110v2	-	P25
Brucella abortus	235	PRJNA284953	284953	Proteobacteria	Alphaproteobacteria	3.30798	57.2	-	LIUD01	19	3404	3153	10/21/15	3/27/17	Contig	University of New Hampshire	SAMN03965486	GCA_001402075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/075/GCA_001402075.1_ASM140207v1	26679575	9060
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.95627	37.7	-	MLPO01	565	2030	1704	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297133	GCA_001869905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/905/GCA_001869905.1_ASM186990v1	27118061	AWRIB884
Vibrio parahaemolyticus S088	1394628	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.07901	45.2	-	AWKG01	405	4869	4644	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338942	GCA_000490555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/555/GCA_000490555.1_S088	-	S088
Klebsiella pneumoniae MGH 21	1328366	PRJNA201936	201936	Proteobacteria	Gammaproteobacteria	5.54258	57.1	-	AYJJ01	8	5549	5283	10/30/13	2/20/17	Scaffold	Broad Institute	SAMN02138561	GCA_000493075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/075/GCA_000493075.1_Kleb_pneu_MGH_21_V1	-	MGH 21
Clostridium botulinum	1491	PRJNA353866	353866	Terrabacteria group	Firmicutes	3.80783	27.2	-	MWJG01	63	3502	3322	4/21/17	7/29/17	Contig	Northern Arizona University	SAMN06022748	GCA_002104035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/035/GCA_002104035.1_ASM210403v1	28733282	Prevot Ped 4
Enterococcus faecalis EnGen0359	1169307	PRJNA157785	157785	Terrabacteria group	Firmicutes	3.34154	37.1	-	ASDV01	12	3470	3252	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847623	GCA_000393295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/295/GCA_000393295.1_Ente_faec_TR197_V1	-	TR197
Streptococcus mutans	1309	PRJNA377637	377637	Terrabacteria group	Firmicutes	1.98007	36.7	-	NBFC01	52	1982	1879	6/30/17	7/3/17	Contig	Peking University School of Stomatology	SAMN06464157	GCA_002213005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/005/GCA_002213005.1_ASM221300v1	-	PKUSS-3
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.15216	52.4	-	CQNG01	81	2525	2199	3/23/15	4/10/17	Contig	SC	SAMEA1690457	GCA_001157065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/065/GCA_001157065.1_8727_8_63	-	GCGS159
Enterococcus faecium EnGen0313	1158636	PRJNA88993	88993	Terrabacteria group	Firmicutes	2.92339	38.1	-	AJDG01	26	3023	2760	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809199	GCA_000394435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/435/GCA_000394435.1_Ente_faec_UAA407pIP819_pIP820_V1	-	UAA407
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.56347	66.6	-	DFRX01	92	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06456346	GCA_002378385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/385/GCA_002378385.1_ASM237838v1	28894102	-
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.14079	41.2	-	CWCT01	88	2085	1898	6/23/15	3/26/17	Contig	SC	SAMEA1032975	GCA_001178505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/505/GCA_001178505.1_6903_6_16	-	EQUI0161
Campylobacter jejuni subsp. jejuni	32022	PRJNA378565	378565	Proteobacteria	delta/epsilon subdivisions	1.61819	30.6	chromosome:NZ_CP020045.1/CP020045.1	-	1	1661	1548	3/15/17	3/17/17	Complete Genome	NCSU	SAMN06554007	GCA_002028305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/305/GCA_002028305.1_ASM202830v1	-	ATCC 35925
Corynebacterium diphtheriae	1717	PRJNA341832	341832	Terrabacteria group	Actinobacteria	2.37285	53.3	-	MIOC01	57	2279	2117	11/10/16	8/24/17	Scaffold	National Institute for Communicable Diseases	SAMN05729418	GCA_001876005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/005/GCA_001876005.1_ASM187600v1	28726616	ST395-KZN-2015-45262
Lactobacillus plantarum	1590	PRJNA296940	296940	Terrabacteria group	Firmicutes	3.26201	45.1	-	LMVD01	115	3202	2904	12/17/15	3/27/17	Scaffold	Radboudumc	SAMN04160662	GCA_001469145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/145/GCA_001469145.1_SF2A35B	26950330	SF2A35B
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.09845	59.5	-	FCKY01	85	4885	4653	1/21/16	3/27/17	Scaffold	SC	SAMEA2273973	GCA_001537725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/725/GCA_001537725.1_12082_3_7	-	2880STDY5682900
Campylobacter coli CVM N13165	1440018	PRJNA232308	232308	Proteobacteria	delta/epsilon subdivisions	1.78262	31.3	-	JAJT01	63	1887	1764	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887147	GCA_001419555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/555/GCA_001419555.1_Campylobacter_coli_CVM_N13165_v1.0	-	CVM N13165
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.56843	55.2	-	JVFX01	80	4349	4207	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197661	GCA_001055165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/165/GCA_001055165.1_ASM105516v1	26230489	467_ECLO
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15465	64.1	-	FRZX01	15	5164	5018	12/14/16	3/21/17	Contig	SC	SAMEA2071301	GCA_900131185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/185/GCA_900131185.1_10665_3_65	-	235
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.91217	66.9	-	LPHF01	166	7269	6838	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449531	GCA_001531535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/535/GCA_001531535.1_ASM153153v1	-	MSMB2093WGS
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.32308	54.7	-	LPPI01	66	5294	5029	12/21/15	3/27/17	Contig	JCVI	SAMN04252926	GCA_001472645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/645/GCA_001472645.1_SMART_710.v1	-	SMART_710
Pseudomonas sp. GTC 16482	1661693	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	6.76439	61.5	-	BCAS01	292	6581	6213	10/3/15	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00031684	GCA_001319995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/995/GCA_001319995.1_ASM131999v1	-	GTC 16482
Streptomyces sp. NRRL F-2799	1463844	PRJNA238534	238534	Terrabacteria group	Actinobacteria	6.11465	71.7	-	JOIF01	68	5706	5412	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645500	GCA_000719895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/895/GCA_000719895.1_ASM71989v1	-	NRRL F-2799
Bacillus sp. FJAT-27251	1684142	PRJNA290134	290134	Terrabacteria group	Firmicutes	5.04395	45.8	-	LIGG01	2	4839	4644	8/25/15	4/10/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN03853466	GCA_001273925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/925/GCA_001273925.1_ASM127392v1	-	FJAT-27251
Acinetobacter sp. CAG:196	1262690	PRJEB751	206614	Proteobacteria	Gammaproteobacteria	2.13439	35.2	-	CBAD01	53	2128	2086	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138549	GCA_000433235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/235/GCA_000433235.1_MGS196	-	-
Clostridium sp. CAG_433_25_7	1896991	PRJNA321218	321218	Terrabacteria group	Firmicutes	0.612995	25.2	-	MNRW01	184	769	450	12/23/16	12/23/16	Scaffold	None	SAMN05717254	GCA_001916155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/155/GCA_001916155.1_ASM191615v1	27819664	-
Staphylococcus sp. HMSC66C11	1608891	PRJNA274543	274543	Terrabacteria group	Firmicutes	2.80415	32.6	-	LTMA01	79	2922	2812	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498876	GCA_001839225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/225/GCA_001839225.1_ASM183922v1	-	HMSC66C11
Mycobacterium sp. UM_WWY	1370121	PRJNA213254	213254	Terrabacteria group	Actinobacteria	7.69005	66.4	-	AUWS01	130	7482	7211	8/26/13	4/8/17	Scaffold	"Universiti Malaya, Kuala Lumpur"	SAMN02471848	GCA_000455145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/145/GCA_000455145.1_Mycobacterium_sp_UM_WWY	-	UM_WWY
Mycobacterium sp. UNCCL9	1449060	PRJNA234937	234937	Terrabacteria group	Actinobacteria	5.56188	66.6	-	JQLT01	27	5332	5205	8/28/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02745506	GCA_000744355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/744/355/GCA_000744355.1_ASM74435v1	-	UNCCL9
Staphylococcus sp. HMSC69H07	1608894	PRJNA274546	274546	Terrabacteria group	Firmicutes	2.527	33.7	-	LTLZ01	56	2382	2203	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498896	GCA_001839245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/245/GCA_001839245.1_ASM183924v1	-	HMSC69H07
Clostridium sp. CAG:12237_41	1896985	PRJNA321218	321218	Terrabacteria group	Firmicutes	3.26322	36.5	-	MNRX01	44	2784	2655	12/23/16	12/23/16	Scaffold	None	SAMN05717255	GCA_001916165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/165/GCA_001916165.1_ASM191616v1	27819664	-
Acinetobacter sp. V2	1051623	PRJNA275383	275383	Proteobacteria	Gammaproteobacteria	4.00785	38.6	-	JZFB01	16	3702	3702	4/10/15	4/10/15	Scaffold	University of KwaZulu Natal (Westville campus)	SAMN03343989	GCA_001188385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/385/GCA_001188385.1_ASM118838v1	-	V2
Bacillus sp. FJAT-27245	1684144	PRJNA290137	290137	Terrabacteria group	Firmicutes	4.60663	45.7	-	LIGI01	5	4518	4390	8/25/15	4/11/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN03853470	GCA_001273955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/955/GCA_001273955.1_ASM127395v1	-	FJAT-27245
Streptomyces sp. NRRL F-2890	1463845	PRJNA238534	238534	Terrabacteria group	Actinobacteria	5.9422	72.1	-	JOIG01	55	5420	5187	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645501	GCA_000719915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/915/GCA_000719915.1_ASM71991v1	-	NRRL F-2890
Pseudomonas sp. NBRC 111117	1661032	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	5.53247	64.5	-	BCAT01	61	5060	4939	10/3/15	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00031652	GCA_001320045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/045/GCA_001320045.1_ASM132004v1	-	NBRC 111117
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.20985	54.9	-	LPPH01	106	5237	4977	12/21/15	3/27/17	Contig	JCVI	SAMN04252927	GCA_001472675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/675/GCA_001472675.1_SMART_716.v1	-	SMART_716
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.52848	67.2	-	LPHL01	140	6772	6390	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449537	GCA_001531585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/585/GCA_001531585.1_ASM153158v1	-	MSMB2106WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15471	64.1	-	FRZU01	21	5170	5024	12/14/16	3/21/17	Contig	SC	SAMEA2070543	GCA_900131195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/195/GCA_900131195.1_10665_3_63	-	233
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.79438	55.9	-	JUZN01	169	4620	4446	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197827	GCA_001055515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/515/GCA_001055515.1_ASM105551v1	26230489	627_ECLO
Campylobacter coli CVM N20344	1440019	PRJNA232309	232309	Proteobacteria	delta/epsilon subdivisions	1.74592	31.3	-	JAJU01	124	1838	1703	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887148	GCA_001419585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/585/GCA_001419585.1_Campylobacter_coli_CVM_N20344_v1.0	-	CVM N20344
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.12869	59.9	-	FCMB01	32	4852	4710	1/21/16	3/27/17	Scaffold	SC	SAMEA2274075	GCA_001537745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/745/GCA_001537745.1_12082_3_95	-	2880STDY5683003
Lactobacillus plantarum	1590	PRJNA306013	306013	Terrabacteria group	Firmicutes	3.18396	44.5	-	LQHC01	57	3059	2935	4/13/16	3/28/17	Scaffold	TIFN	SAMN04382578	GCA_001619265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/265/GCA_001619265.1_ASM161926v1	27313301	FBR5
Corynebacterium diphtheriae	1717	PRJNA341832	341832	Terrabacteria group	Actinobacteria	2.44577	53.6	-	MIOD01	67	2400	2205	11/10/16	8/24/17	Scaffold	National Institute for Communicable Diseases	SAMN05729419	GCA_001876025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/025/GCA_001876025.1_ASM187602v1	28726616	ST378-KZN-2015-45236
Lacinutrix venerupis	1486034	PRJNA361535	361535	FCB group	Bacteroidetes/Chlorobi group	3.1924	30.6	chromosome:NZ_CP019352.1/CP019352.1	-	1	2855	2805	1/26/17	4/17/17	Complete Genome	Korea Research Institute of Bioscience & Biotechnology	SAMN06234633	GCA_001971745.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/745/GCA_001971745.1_ASM197174v1	-	DOK2-8
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12647	41.2	-	CWCP01	75	2056	1876	6/24/15	3/26/17	Contig	SC	SAMEA1032977	GCA_001178525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/525/GCA_001178525.1_6903_6_15	-	EQUI0160
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.13185	66.3	-	DFVQ01	119	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454003	GCA_002380055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/055/GCA_002380055.1_ASM238005v1	28894102	-
Enterococcus faecium EnGen0315	1158638	PRJNA88997	88997	Terrabacteria group	Firmicutes	2.67632	38.2	-	AJDI01	16	2712	2501	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809232	GCA_000394475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/475/GCA_000394475.1_Ente_faec_UAA430_V1	-	UAA430
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14098	52.4	-	CQJA01	75	2508	2187	3/23/15	4/11/17	Contig	SC	SAMEA1690426	GCA_001158545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/545/GCA_001158545.1_8727_8_91	-	GCGS187
Streptococcus mutans	1309	PRJNA377637	377637	Terrabacteria group	Firmicutes	2.00366	36.7	-	NBFJ01	52	2009	1901	6/30/17	7/3/17	Contig	Peking University School of Stomatology	SAMN06464164	GCA_002213035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/035/GCA_002213035.1_ASM221303v1	-	PKUSS-10
Enterococcus faecalis EnGen0360	1169308	PRJNA157787	157787	Terrabacteria group	Firmicutes	2.9269	37.4	-	ASDW01	7	2984	2852	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847624	GCA_000393315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/315/GCA_000393315.1_Ente_faec_RMC65_V1	-	RMC65
Clostridium botulinum	1491	PRJDB5740	388975	Terrabacteria group	Firmicutes	2.90417	28.4	-	BDQO02	275	2843	1902	6/16/17	9/6/17	Contig	"Division of Biomedical Food Research, NIHS"	SAMD00080332	GCA_002260585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/585/GCA_002260585.1_C.botulinum_2.0	-	Adk2012
Klebsiella pneumoniae MGH 19	1328364	PRJNA201934	201934	Proteobacteria	Gammaproteobacteria	5.24597	57.5	-	AYJL01	2	5183	4962	10/30/13	2/21/17	Scaffold	Broad Institute	SAMN02138559	GCA_000493115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/115/GCA_000493115.1_Kleb_pneu_MGH_19_V1	-	MGH 19
Vibrio parahaemolyticus S087	1394627	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.08037	45.3	-	AWKH01	449	4888	4645	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338941	GCA_000490575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/575/GCA_000490575.1_S087	-	S087
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.85545	37.9	-	MLPP01	226	1914	1592	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297134	GCA_001869925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/925/GCA_001869925.1_ASM186992v1	27118061	AWRIB885
Brucella abortus	235	PRJNA284953	284953	Proteobacteria	Alphaproteobacteria	3.25968	57.2	-	LJDE01	9	3347	3119	10/21/15	3/27/17	Contig	University of New Hampshire	SAMN03965481	GCA_001402095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/095/GCA_001402095.1_ASM140209v1	26679575	15074.1
Clostridioides difficile Y247	1151383	PRJNA85941	85941	Terrabacteria group	Firmicutes	4.05309	28.4	-	AVLB01	44	3768	3574	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766744	GCA_000451145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/145/GCA_000451145.2_ASM45114v2	-	Y247
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.8855	47.7	-	LBGM01	49	3597	3455	10/22/15	3/27/17	Scaffold	University of Alberta	SAMN03488022	GCA_001402595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/595/GCA_001402595.1_ASM140259v1	26454015	YB7A09
Bacillus thuringiensis serovar dakota	132268	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.03688	34.8	-	MOOT01	67	6313	5914	5/17/17	5/24/17	Scaffold	Huazhong Agricultural University	SAMN05934555	GCA_002148095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/095/GCA_002148095.1_ASM214809v1	-	BGSC 4R1
Burkholderia pseudomallei MSHR338	1343079	PRJNA207013	207013	Proteobacteria	Betaproteobacteria	7.31723	67.9	-	ATJY01	59	7588	6978	8/8/13	3/24/17	Contig	Menzies School of Health Research	SAMN02470547	GCA_000445385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/385/GCA_000445385.1_MSHR338	25339397	MSHR338
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.26321	67	-	MUVN01	163	7963	7407	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001976	GCA_001993875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/875/GCA_001993875.1_ASM199387v1	-	VC13195
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.63171	50.5	-	FTXG01	410	5234	4393	1/28/17	2/26/17	Contig	SC	SAMEA2055578	GCA_900158855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/855/GCA_900158855.1_9803_4_85	-	2090STDY5488133
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.4365	38.3	-	FJAS01	24	3165	3045	2/20/16	3/27/17	Contig	SC	SAMEA1968044	GCA_900052055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/055/GCA_900052055.1_10060_4_24	-	2531STDY5467305
Pseudomonas syringae pv. actinidiae ICMP 19099	1194421	PRJNA167422	167422	Proteobacteria	Gammaproteobacteria	6.22531	58.7	-	AOKD01	342	5818	5387	7/1/13	3/24/17	Scaffold	The New Zealand Institute for Plant & Food Research Limited	SAMN02470809	GCA_000416805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/805/GCA_000416805.1_ASM41680v1	-	ICMP 19099
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05328	41.3	-	CEDB01	121	2028	1887	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233885	GCA_000941315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/315/GCA_000941315.1_Velvet_assembly	-	LS0I
Streptococcus agalactiae GB00663	1154929	PRJNA86531	86531	Terrabacteria group	Firmicutes	2.13255	35.3	-	ALTX01	38	2208	2081	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991167	GCA_000290435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/435/GCA_000290435.1_ASM29043v1	-	GB00663
Acinetobacter baumannii OIFC032	903890	PRJNA53379	53379	Proteobacteria	Gammaproteobacteria	3.89389	39.086	plasmid pOIFC032-101:NZ_AFCZ02000003.1/AFCZ02000003.1; plasmid pOIFC032-8.6:NZ_AFCZ02000004.1/AFCZ02000004.1	AFCZ02	4	3738	3462	5/24/11	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00114924	GCA_000215005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/005/GCA_000215005.2_AcbauOIFC032v1.0	-	OIFC032
Pseudomonas aeruginosa BWHPSA016	1402516	PRJNA219877	219877	Proteobacteria	Gammaproteobacteria	6.48139	66.3	-	AXQM01	3	6170	5993	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360688	GCA_000481385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/385/GCA_000481385.1_Pseu_aeru_BWH016_V1	-	BWHPSA016
Shigella flexneri K-1770	766153	PRJNA49087	49087	Proteobacteria	Gammaproteobacteria	4.81428	50.7	-	AKMX01	101	5532	5384	6/14/12	11/19/13	Contig	Institute for Genome Sciences	SAMN00017000	GCA_000268245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/245/GCA_000268245.1_ASM26824v1	-	K-1770
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.61956	34.9	-	JQPZ01	236	4190	3824	2/24/16	3/27/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949557	GCA_001568885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/885/GCA_001568885.1_ASM156888v1	26833181	56660
Streptococcus pyogenes NS88.2	1138874	PRJEA84331	84331	Terrabacteria group	Firmicutes	1.72093	38.5	-	CAHN01	298	1744	1602	3/2/12	3/23/17	Contig	University of Wollongong	SAMEA2272718	GCA_000263315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/315/GCA_000263315.1_SPNS88.2	-	NS88.2
Neisseria meningitidis NM126	1095683	PRJNA76297	76297	Proteobacteria	Betaproteobacteria	2.21312	51.6	-	ANRQ01	27	2592	2211	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055164	GCA_000328145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/145/GCA_000328145.2_ASM32814v2	-	NM126
Helicobacter pylori	210	PRJNA360417	360417	Proteobacteria	delta/epsilon subdivisions	1.67853	38.9	-	MTWR01	207	1670	1446	2/13/17	2/22/17	Scaffold	Vanderbilt University Medical Center	SAMN06251087	GCA_001998165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/165/GCA_001998165.1_ASM199816v1	-	SV376_1
Streptococcus pneumoniae GA43257	760816	PRJNA48791	48791	Terrabacteria group	Firmicutes	2.11847	39.7	-	AIKU01	11	2340	2052	3/7/12	3/8/17	Contig	Institute for Genome Sciences	SAMN00718935	GCA_000251705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/705/GCA_000251705.2_ASM25170v2	-	GA43257
Campylobacter jejuni	197	PRJNA233954	233954	Proteobacteria	delta/epsilon subdivisions	1.62948	30.6	chromosome:NZ_CP007189.1/CP007189.1	-	1	1681	1587	1/13/17	3/21/17	Complete Genome	University of Nottingham	SAMN02630631	GCA_001951255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/255/GCA_001951255.1_ASM195125v1	-	HF5-5-1
Mycobacterium tuberculosis PanR1006	1352598	PRJNA210075	210075	Terrabacteria group	Actinobacteria	4.40912	65.4497	chromosome:NZ_CM002097.1/CM002097.1	ATST01	1	4302	4068	8/5/13	3/8/17	Chromosome	Texas A&M University	SAMN02471099	GCA_000445975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/975/GCA_000445975.1_fedora1006_IS	23884993	PanR1006
Mycobacterium avium subsp. hominissuis	439334	PRJEB13431	320171	Terrabacteria group	Actinobacteria	5.09254	69.2	-	FKJN01	175	4854	4554	4/30/16	4/5/17	Scaffold	Scientific Institute of Public Health	SAMEA3925668	GCA_900079575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/575/GCA_900079575.1_LYM122	-	-
Bacillus cereus	1396	PRJNA368734	368734	Terrabacteria group	Firmicutes	5.52474	35	-	MUBB01	67	5908	5552	2/27/17	3/2/17	Scaffold	Georgia Institute of Technology	SAMN06270745	GCA_002007005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/005/GCA_002007005.1_ASM200700v1	-	LA2007
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.73035	31.8	-	LWBE01	67	2781	2649	4/15/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04605739	GCA_001622805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/805/GCA_001622805.1_ASM162280v1	-	LRKNS054
Listeria monocytogenes	1639	PRJNA320339	320339	Terrabacteria group	Firmicutes	3.04493	37.7	-	LXQU01	43	3100	3011	6/6/16	3/1/17	Scaffold	CSIRO	SAMN04932624	GCA_001658235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/235/GCA_001658235.1_ASM165823v1	-	2964
Yersinia pestis 42091	755877	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.49583	47.6	-	ADPI01	937	4282	4015	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403004	GCA_000323405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/405/GCA_000323405.1_ASM32340v1	23271803	42091
Campylobacter jejuni subsp. jejuni 55037	889218	PRJNA52861	52861	Proteobacteria	delta/epsilon subdivisions	1.58972	30.5	-	AIOH01	104	1669	1564	3/16/12	3/15/17	Contig	Cornell University	SAMN02429009	GCA_000254435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/435/GCA_000254435.2_ASM25443v2	-	55037
Campylobacter jejuni	197	PRJNA233954	233954	Proteobacteria	delta/epsilon subdivisions	1.62949	30.6	chromosome:NZ_CP007190.1/CP007190.1	-	1	1680	1586	1/13/17	3/21/17	Complete Genome	University of Nottingham	SAMN02630632	GCA_001951275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/275/GCA_001951275.1_ASM195127v1	-	HF5-7-1
Staphylococcus aureus subsp. aureus C427	585151	PRJNA39229	39229	Terrabacteria group	Firmicutes	2.89184	32.9	-	ACSQ01	18	3020	2823	12/9/09	3/2/17	Scaffold	Broad Institute	SAMN02595339	GCA_000162615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/615/GCA_000162615.1_ASM16261v1	22535928	C427
Staphylococcus aureus subsp. aureus D139	585152	PRJNA39231	39231	Terrabacteria group	Firmicutes	2.82951	32.9	-	ACSR01	31	2958	2713	12/9/09	3/2/17	Scaffold	Broad Institute	SAMN02595340	GCA_000162635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/635/GCA_000162635.1_ASM16263v1	-	D139
Campylobacter jejuni	197	PRJNA350584	350584	Proteobacteria	delta/epsilon subdivisions	1.69432	30.6	chromosome:NZ_CP017862.1/CP017862.1	-	1	1794	1654	11/3/16	3/20/17	Complete Genome	University of Tulsa	SAMN05942183	GCA_001865395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/395/GCA_001865395.1_ASM186539v1	-	FJ3124
Campylobacter jejuni subsp. jejuni LMG 9879	889245	PRJNA52915	52915	Proteobacteria	delta/epsilon subdivisions	1.65081	30.5	-	AIOI01	129	1759	1646	3/16/12	3/15/17	Contig	Cornell University	SAMN02429010	GCA_000254455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/455/GCA_000254455.2_ASM25445v2	-	LMG 9879
Yersinia pestis 42095	755878	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.51258	47.6	-	ADPJ01	1119	4348	3966	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403005	GCA_000323425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/425/GCA_000323425.1_ASM32342v1	23271803	42095
Listeria monocytogenes	1639	PRJNA320339	320339	Terrabacteria group	Firmicutes	3.04975	38	-	LXQV01	77	3113	3031	6/6/16	3/1/17	Scaffold	CSIRO	SAMN04932625	GCA_001658255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/255/GCA_001658255.1_ASM165825v1	-	2973
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.71378	31.8	-	LWBF01	64	2784	2626	4/15/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04605740	GCA_001622825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/825/GCA_001622825.1_ASM162282v1	-	LRKNS056
Bacillus cereus	1396	PRJNA301540	301540	Terrabacteria group	Firmicutes	5.72726	35.1	-	LOJQ01	132	6208	5792	3/6/17	3/8/17	Scaffold	Guangdong Ocean University	SAMN04251492	GCA_002021695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/695/GCA_002021695.1_ASM202169v1	-	WH2015
Mycobacterium avium subsp. paratuberculosis JQ6	1112208	PRJNA76615	76615	Terrabacteria group	Actinobacteria	4.69701	69	-	AHBA01	176	-	-	12/29/11	1/8/14	Contig	University of Wisconsin-Madison	SAMN02472066	GCA_000240365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/365/GCA_000240365.2_ASM24036v2	22393374	JQ6
Mycobacterium tuberculosis H37RvAE	757417	PRJNA47933	47933	Terrabacteria group	Actinobacteria	4.41095	65.6	chromosome:NZ_CM002882.1/CM002882.1	AORP01	1	4286	4132	8/29/14	3/11/17	Chromosome	Texas A&M University	SAMN03013397	GCA_000746805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/805/GCA_000746805.1_H37RvAE4	20472797	H37RvAE
Campylobacter jejuni subsp. jejuni str. RM3420	1340842	PRJNA206197	206197	Proteobacteria	delta/epsilon subdivisions	1.66678	30.6	chromosome:NZ_CP017456.1/CP017456.1	-	1	1743	1644	10/18/16	3/20/17	Complete Genome	USDA ARS	SAMN05830826	GCA_001767215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/215/GCA_001767215.1_ASM176721v1	-	RM3420
Streptococcus pneumoniae GA43264	760817	PRJNA48793	48793	Terrabacteria group	Firmicutes	2.16249	39.6	-	AIJS01	13	2367	2053	3/7/12	3/8/17	Contig	Institute for Genome Sciences	SAMN00632909	GCA_000251725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/725/GCA_000251725.2_ASM25172v2	-	GA43264
Helicobacter pylori	210	PRJNA360417	360417	Proteobacteria	delta/epsilon subdivisions	1.64654	39	-	MTWN01	60	1610	1444	2/13/17	2/22/17	Scaffold	Vanderbilt University Medical Center	SAMN06250661	GCA_001998385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/385/GCA_001998385.1_ASM199838v1	-	PZ5033_3A2
Neisseria meningitidis M7089	1095686	PRJNA76303	76303	Proteobacteria	Betaproteobacteria	2.16865	51.8	-	ANRN01	30	2541	2169	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055167	GCA_000328165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/165/GCA_000328165.2_ASM32816v2	-	M7089
Streptococcus pyogenes 06BA18369	1210041	PRJNA170537	170537	Terrabacteria group	Firmicutes	1.8134	38.4	-	APMZ01	47	1845	1742	5/10/13	3/23/17	Contig	Northern Antibiotic Resistance Partnership	SAMN02470879	GCA_000390225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/225/GCA_000390225.1_GAS1.0	23814030	06BA18369
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.51815	34.9	-	JQQH01	300	4069	3627	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949515	GCA_001568935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/935/GCA_001568935.1_ASM156893v1	26833181	56133
Shigella flexneri 6603-63	766161	PRJNA49103	49103	Proteobacteria	Gammaproteobacteria	4.62672	50.9	-	AGRC01	65	5230	5092	7/27/12	11/19/13	Contig	Institute for Genome Sciences	SAMN00017231	GCA_000281795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/795/GCA_000281795.1_ASM28179v1	-	6603-63
Pseudomonas aeruginosa BWHPSA015	1402515	PRJNA219876	219876	Proteobacteria	Gammaproteobacteria	6.42506	66.5	-	AXQN01	5	6056	5903	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360687	GCA_000481405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/405/GCA_000481405.1_Pseu_aeru_BWH015_V1	-	BWHPSA015
Acinetobacter baumannii ABNIH1	992402	PRJNA63335	63335	Proteobacteria	Gammaproteobacteria	3.89919	39.1	-	AFSZ01	103	3786	3519	8/1/11	3/15/17	Contig	NIH Intramural Sequencing Center	SAMN00855421	GCA_000222225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/225/GCA_000222225.2_ASM22222v2	21825119	ABNIH1
Streptococcus agalactiae GB00864	1154931	PRJNA86535	86535	Terrabacteria group	Firmicutes	2.03793	35.2	-	ALTZ01	39	2114	1971	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991166	GCA_000290455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/455/GCA_000290455.1_ASM29045v1	-	GB00864
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.1825	41.1	-	CECY01	172	2175	2052	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233882	GCA_000941375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/375/GCA_000941375.1_Velvet_assembly	-	LS0B
Pseudomonas syringae pv. actinidiae ICMP 19100	1194420	PRJNA167423	167423	Proteobacteria	Gammaproteobacteria	6.21661	58.7	-	AOKC01	532	5802	5396	7/1/13	3/27/17	Scaffold	The New Zealand Institute for Plant & Food Research Limited	SAMN02470805	GCA_000416825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/825/GCA_000416825.2_ASM41682v2	-	ICMP 19100
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.57521	38.2	-	FJBL01	37	3294	3141	2/20/16	3/27/17	Contig	SC	SAMEA2058462	GCA_900052065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/065/GCA_900052065.1_10771_1_43	-	2531STDY5467324
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.45846	50.8	-	FTXJ01	381	4983	4237	1/28/17	2/26/17	Contig	SC	SAMEA2059497	GCA_900158885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/885/GCA_900158885.1_9803_4_89	-	2090STDY5488137
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.15951	67	-	MUVQ01	250	7873	7296	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001979	GCA_001993895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/895/GCA_001993895.1_ASM199389v1	-	VC14309
Burkholderia pseudomallei MSHR5858	1306417	PRJNA193331	193331	Proteobacteria	Betaproteobacteria	7.25756	68.2	-	AVAK01	128	7505	6927	8/21/13	3/24/17	Contig	Northern Arizona University	SAMN01983947	GCA_000452945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/945/GCA_000452945.1_BPMSHR5858	-	MSHR5858
Bacillus thuringiensis serovar indiana	180850	PRJNA349211	349211	Terrabacteria group	Firmicutes	5.90618	35.3	-	MOOU01	226	6382	5789	5/17/17	6/16/17	Scaffold	Huazhong Agricultural University	SAMN05934563	GCA_002148105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/105/GCA_002148105.1_ASM214810v1	-	h16
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	4.01384	47.5	-	LBGN01	44	3796	3609	10/22/15	3/27/17	Scaffold	University of Alberta	SAMN03488023	GCA_001402655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/655/GCA_001402655.1_ASM140265v1	26454015	YB8E08
Clostridioides difficile Y202	1151380	PRJNA85935	85935	Terrabacteria group	Firmicutes	3.9026	28.2	-	AVKY01	340	3725	3490	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766740	GCA_000451165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/165/GCA_000451165.2_ASM45116v2	-	Y202
Brucella abortus	235	PRJNA338234	338234	Proteobacteria	Alphaproteobacteria	3.25615	57.2	-	MIJI01	30	3330	3110	10/28/16	3/28/17	Contig	NCDC	SAMN05526332	GCA_001856185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/185/GCA_001856185.1_ASM185618v1	-	Br.a-1549/11-Geo
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.98948	37.7	-	MLPR01	485	2107	1778	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297136	GCA_001869935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/935/GCA_001869935.1_ASM186993v1	27118061	AWRIB888
Vibrio parahaemolyticus S086	1394626	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.06659	45.3	-	AWKI01	469	4897	4614	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338940	GCA_000490595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/595/GCA_000490595.1_S086	-	S086
Klebsiella pneumoniae MGH 18	1328363	PRJNA201933	201933	Proteobacteria	Gammaproteobacteria	5.37289	57.4	-	AYJM01	5	5314	5088	10/30/13	2/21/17	Scaffold	Broad Institute	SAMN02138558	GCA_000493135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/135/GCA_000493135.1_Kleb_pneu_MGH_18_V1	-	MGH 18
Clostridium botulinum	1491	PRJNA271394	271394	Terrabacteria group	Firmicutes	3.93811	28	-	JXMY01	90	3894	3631	2/2/15	3/25/17	Scaffold	Institut Pasteur	SAMN03274242	GCA_000830755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/755/GCA_000830755.1_ASM83075v1	25838479	277-00
Enterococcus faecalis EnGen0340	1169309	PRJNA157789	157789	Terrabacteria group	Firmicutes	2.83322	37.4	-	ASDX01	5	2861	2722	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847625	GCA_000393335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/335/GCA_000393335.1_Ente_faec_B653_V1	-	B653
Streptococcus mutans	1309	PRJNA377637	377637	Terrabacteria group	Firmicutes	1.9956	36.6	-	NBFA01	36	2006	1902	6/30/17	7/3/17	Contig	Peking University School of Stomatology	SAMN06464155	GCA_002213065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/065/GCA_002213065.1_ASM221306v1	-	PKUSS-1
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.14967	52.4	-	CQNF01	72	2524	2204	3/22/15	4/10/17	Contig	SC	SAMEA1677303	GCA_001158885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/885/GCA_001158885.1_8727_5_44	-	GCGS194
Enterococcus faecium EnGen0317	1158639	PRJNA88999	88999	Terrabacteria group	Firmicutes	2.78234	38.1	-	AJDJ01	21	2872	2618	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809241	GCA_000394495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/495/GCA_000394495.1_Ente_faec_UAA431_V1	-	UAA431
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.61321	65.7	-	DFWK01	413	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453747	GCA_002380865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/865/GCA_002380865.1_ASM238086v1	28894102	-
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12878	41.2	-	CVYL01	76	2071	1876	6/23/15	3/26/17	Contig	SC	SAMEA1032978	GCA_001178545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/545/GCA_001178545.1_6830_4_79	-	EQUI0224
Candidatus Mikella endobia	1778264	PRJEB12069	316506	Proteobacteria	Gammaproteobacteria	0.352837	30.6	chromosome I:NZ_LN999831.1/LN999831.1	-	1	325	273	3/26/16	4/12/17	Complete Genome	UNIVERSITY OF SOUTH BOHEMIA	SAMEA3725907	GCA_900048045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/045/GCA_900048045.1_MEPMAR	-	-
Corynebacterium diphtheriae	1717	PRJNA341832	341832	Terrabacteria group	Actinobacteria	2.37837	53.4	-	MIOE01	47	2280	2118	11/10/16	8/24/17	Scaffold	National Institute for Communicable Diseases	SAMN05729420	GCA_001876035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/035/GCA_001876035.1_ASM187603v1	28726616	ST395-KZN-2015-45237
Lactobacillus plantarum	1590	PRJNA306013	306013	Terrabacteria group	Firmicutes	3.27644	44.3	-	LQHB01	85	3185	3021	4/13/16	3/28/17	Scaffold	TIFN	SAMN04382577	GCA_001619275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/275/GCA_001619275.1_ASM161927v1	27313301	FBR4
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.01133	60.2	-	FCFY01	18	4732	4570	1/21/16	3/27/17	Scaffold	SC	SAMEA2273893	GCA_001537765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/765/GCA_001537765.1_12082_2_29	-	2880STDY5682820
Campylobacter coli CVM N20402	1440020	PRJNA232310	232310	Proteobacteria	delta/epsilon subdivisions	1.78765	31.1	-	JAJV01	121	1881	1754	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887149	GCA_001419605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/605/GCA_001419605.1_Campylobacter_coli_CVM_N20402_v1.0	-	CVM N20402
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.7516	56	-	JVQZ01	66	4544	4406	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197373	GCA_001055645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/645/GCA_001055645.1_ASM105564v1	26230489	182_ECLO
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82943	64.2	-	FVCM01	7	4814	4699	3/10/17	3/18/17	Contig	SC	SAMEA2070544	GCA_900131205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/205/GCA_900131205.1_10665_3_66	-	236
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.26739	67.4	-	LPHK01	102	6564	6220	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449536	GCA_001531595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/595/GCA_001531595.1_ASM153159v1	-	MSMB2105WGS
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.07397	54.9	-	LPPG01	86	5033	4799	12/21/15	3/27/17	Contig	JCVI	SAMN04252928	GCA_001472685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/685/GCA_001472685.1_SMART_723.v1	-	SMART_723
Pseudomonas sp. NBRC 111118	1661033	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	6.40077	61	-	BCAU01	206	6066	5869	10/3/15	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00031653	GCA_001320085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/085/GCA_001320085.1_ASM132008v1	-	NBRC 111118
Streptomyces sp. NRRL F-2202	1463839	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.80694	72.7	-	JOIH01	104	6759	6479	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645502	GCA_000719925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/925/GCA_000719925.1_ASM71992v1	-	NRRL F-2202
Bacillus sp. FJAT-18019	1705110	PRJNA293496	293496	Terrabacteria group	Firmicutes	6.42734	46.8	-	LITP01	8	5958	5677	8/31/15	4/11/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04004260	GCA_001275645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/645/GCA_001275645.1_ASM127564v1	-	FJAT-18019
Acinetobacter sp. NCTC 7422	981223	PRJNA62433	62433	Proteobacteria	Gammaproteobacteria	3.99265	41.3	-	AIED01	164	-	-	2/21/12	1/8/14	Contig	University of Birmingham	SAMN02471590	GCA_000248195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/195/GCA_000248195.2_ASM24819v2	23259572	NCTC 7422
Clostridium sp. CAG:245_30_32	1896986	PRJNA321218	321218	Terrabacteria group	Firmicutes	1.78484	29.8	-	MNRY01	48	1705	1604	12/23/16	12/23/16	Scaffold	None	SAMN05717256	GCA_001916175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/175/GCA_001916175.1_ASM191617v1	27819664	-
Staphylococcus sp. HMSC70A05	1608895	PRJNA274547	274547	Terrabacteria group	Firmicutes	2.53077	33.7	-	LTLY01	42	2420	2333	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498885	GCA_001839265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/265/GCA_001839265.1_ASM183926v1	-	HMSC70A05
Mycobacterium sp. UM_NYF	1385419	PRJNA214893	214893	Terrabacteria group	Actinobacteria	6.80917	67.9	-	LBEW01	332	6633	6360	5/1/15	4/10/17	Scaffold	"Universiti Malaya, Kuala Lumpur"	SAMN03493514	GCA_000987455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/987/455/GCA_000987455.1_ASM98745v1	-	UM_NYF
Mycobacterium sp. (ex Dasyatis americana)	1866905	PRJNA326126	326126	Terrabacteria group	Actinobacteria	5.81953	66.1	-	MAIH01	170	5643	5372	10/11/16	4/13/17	Scaffold	USDA Animal Plant Health Inspection Service-National Veterinary Services Laboratories	SAMN05263452	GCA_001756795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/795/GCA_001756795.1_ASM175679v1	-	Dasyatis americana
Staphylococcus sp. HMSC70F07	1608897	PRJNA274549	274549	Terrabacteria group	Firmicutes	2.79964	32.7	-	LTLX01	76	2910	2771	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498887	GCA_001839275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/275/GCA_001839275.1_ASM183927v1	-	HMSC70F07
Clostridium sp. CAG:307_30_263	1896987	PRJNA321218	321218	Terrabacteria group	Firmicutes	2.04614	29.7	-	MNRZ01	73	1937	1831	12/23/16	12/23/16	Scaffold	None	SAMN05717257	GCA_001916215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/215/GCA_001916215.1_ASM191621v1	27819664	-
Acinetobacter sp. NCTC 10304	981224	PRJNA62435	62435	Proteobacteria	Gammaproteobacteria	4.15721	39.1	-	AIEE01	374	-	-	2/21/12	1/8/14	Contig	University of Birmingham	SAMN02471591	GCA_000248215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/215/GCA_000248215.2_ASM24821v2	23259572	NCTC 10304
Bacillus sp. FJAT-21945	1581033	PRJNA293397	293397	Terrabacteria group	Firmicutes	5.16621	37.4	-	LITN01	28	5167	4944	8/31/15	4/11/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04002532	GCA_001275655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/655/GCA_001275655.1_ASM127565v1	-	FJAT-21945
Streptomyces sp. NRRL F-3218	1463847	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.07804	72.6	-	JOIP01	101	7036	6717	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645510	GCA_000720055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/055/GCA_000720055.1_ASM72005v1	-	NRRL F-3218
Pseudomonas sp. NBRC 111119	1661034	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	5.41501	62.3	-	BCAV01	106	5024	4841	10/3/15	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00031654	GCA_001320125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/125/GCA_001320125.1_ASM132012v1	-	NBRC 111119
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.02683	55.2	-	LPPC01	60	4996	4769	12/21/15	3/27/17	Contig	JCVI	SAMN04252932	GCA_001472765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/765/GCA_001472765.1_SMART_803.v1	-	SMART_803
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.37999	67.3	-	LPHJ01	126	6690	6291	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449535	GCA_001531605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/605/GCA_001531605.1_ASM153160v1	-	MSMB2104WGS
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.0255	64.2	-	FVCP01	12	5044	4918	3/10/17	3/18/17	Contig	SC	SAMEA2068674	GCA_900131225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/225/GCA_900131225.1_10665_3_67	-	237
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.78272	56	-	JVQL01	89	4562	4446	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197387	GCA_001055805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/805/GCA_001055805.1_ASM105580v1	26230489	195_ECLO
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.91543	31	-	JOVU01	141	2062	1909	11/10/15	3/18/17	Contig	FDA	SAMN02693042	GCA_001441745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/745/GCA_001441745.1_Campylobacter_coli_CVM_N14784-R_v1.0	-	CVM N14784
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.20434	60	-	FCMX01	25	4923	4763	1/21/16	3/27/17	Scaffold	SC	SAMEA2274077	GCA_001537785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/785/GCA_001537785.1_12045_8_1	-	2880STDY5683006
Lactobacillus plantarum	1590	PRJNA306013	306013	Terrabacteria group	Firmicutes	3.33281	44.4	-	LQHD01	76	3207	3075	4/13/16	3/28/17	Scaffold	TIFN	SAMN04382579	GCA_001619295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/295/GCA_001619295.1_ASM161929v1	27313301	FBR6
Corynebacterium diphtheriae	1717	PRJNA341832	341832	Terrabacteria group	Actinobacteria	2.44878	53.6	-	MIOL01	76	2415	2212	11/10/16	8/24/17	Scaffold	National Institute for Communicable Diseases	SAMN05729427	GCA_001876095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/095/GCA_001876095.1_ASM187609v1	28726616	ST378-KZN-2015-45787
Gemella sp. oral taxon 928	1785995	PRJNA282954	282954	Terrabacteria group	Firmicutes	1.76968	30.6	chromosome:NZ_CP014233.1/CP014233.1	-	1	1632	1507	2/9/16	4/11/17	Complete Genome	The Forsyth Institute	SAMN04435857	GCA_001553915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/915/GCA_001553915.1_ASM155391v1	-	W2231
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15947	41.1	-	CVZX01	72	2091	1930	6/24/15	3/26/17	Contig	SC	SAMEA1032981	GCA_001178565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/565/GCA_001178565.1_6903_3_28	-	EQUI0077
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.76018	66.1	-	DGBQ01	37	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456271	GCA_002384285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/285/GCA_002384285.1_ASM238428v1	28894102	-
Enterococcus faecium EnGen0305	1158641	PRJNA89003	89003	Terrabacteria group	Firmicutes	2.81108	38	-	AJDL01	19	2841	2587	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809243	GCA_000394535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/535/GCA_000394535.1_Ente_faec_EnGen0305_V1	-	EnGen0305
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.09215	52.6	-	CQNX01	70	2444	2120	3/23/15	4/10/17	Contig	SC	SAMEA1690409	GCA_001159225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/225/GCA_001159225.1_8727_8_42	-	GCGS138
Streptococcus mutans KK23	1257039	PRJNA179254	179254	Terrabacteria group	Firmicutes	1.9762	36.7	-	AOBZ01	38	1967	1855	3/21/13	3/23/17	Scaffold	Institute of Bioprocess and Biosystems Engineering 	SAMN02469955	GCA_000347835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/835/GCA_000347835.1_KK23_V1	23805886	KK23
Enterococcus faecalis EnGen0367	1169310	PRJNA157791	157791	Terrabacteria group	Firmicutes	2.89225	37.6	-	ASDY01	4	2968	2757	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847626	GCA_000393355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/355/GCA_000393355.1_Ente_faec_D173_V1	-	D173
Clostridium botulinum	1491	PRJNA290143	290143	Terrabacteria group	Firmicutes	3.11886	27.9	-	LGVO01	104	3000	2871	8/11/15	3/26/17	Scaffold	Anses	SAMN03876596	GCA_001264545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/545/GCA_001264545.1_ASM126454v1	26430029	38028-CD
Klebsiella pneumoniae MGH 17	1328362	PRJNA201932	201932	Proteobacteria	Gammaproteobacteria	5.52473	57.1	-	AYJN01	11	5511	5297	10/30/13	2/21/17	Scaffold	Broad Institute	SAMN02138557	GCA_000493155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/155/GCA_000493155.1_Kleb_pneu_MGH_17_V1	-	MGH 17
Vibrio parahaemolyticus S083	1394625	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.11134	45.2	-	AWKJ01	442	4904	4661	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338939	GCA_000490615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/615/GCA_000490615.1_S083	-	S083
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.90197	38	-	MLPQ01	217	1962	1735	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297135	GCA_001869945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/945/GCA_001869945.1_ASM186994v1	27118061	AWRIB887
Brucella abortus	235	PRJNA338234	338234	Proteobacteria	Alphaproteobacteria	3.25854	57.2	-	MIJK01	30	3340	3114	10/28/16	3/28/17	Contig	NCDC	SAMN05526409	GCA_001856195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/195/GCA_001856195.1_ASM185619v1	-	Br.a-1910/13-2013-Geo
Clostridioides difficile Y266	1151384	PRJNA85943	85943	Terrabacteria group	Firmicutes	4.12292	28.7	-	AVLC01	190	3873	3694	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766745	GCA_000451185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/185/GCA_000451185.2_ASM45118v2	-	Y266
Vibrio cholerae O1 str. 2010EL-1798	925768	PRJNA60003	60003	Proteobacteria	Gammaproteobacteria	4.01668	47.5	-	AELI01	93	3795	3672	11/12/10	3/22/17	Contig	Centers for Disease Control and Prevention	SAMN00138732	GCA_000166475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/475/GCA_000166475.2_ASM16647v2	-	2010EL-1798
Bacillus thuringiensis serovar sinensis	1042875	PRJNA349211	349211	Terrabacteria group	Firmicutes	6.00388	35.1	-	MOOW01	95	6267	5803	5/17/17	6/16/17	Scaffold	Huazhong Agricultural University	SAMN05934578	GCA_002148135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/135/GCA_002148135.1_ASM214813v1	-	T70001
Burkholderia pseudomallei MSHR5848	1306420	PRJNA193328	193328	Proteobacteria	Betaproteobacteria	7.40097	68	-	AVAJ01	116	7665	6993	8/21/13	3/24/17	Contig	Northern Arizona University	SAMN01983945	GCA_000452965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/965/GCA_000452965.1_BPMSHR5848	-	MSHR5848
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.2578	67	-	MUVR01	165	7960	7401	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001980	GCA_001993905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/905/GCA_001993905.1_ASM199390v1	-	VC14715
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.4724	50.8	-	FTXL01	368	4999	4246	1/28/17	2/26/17	Contig	SC	SAMEA2055580	GCA_900158905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/905/GCA_900158905.1_9803_4_91	-	2090STDY5488139
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.5831	38.2	-	FJBC01	44	3301	3143	2/20/16	3/27/17	Contig	SC	SAMEA2059851	GCA_900052075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/075/GCA_900052075.1_10771_1_9	-	2531STDY5467290
Pseudomonas syringae pv. actinidiae ICMP 19102	1194416	PRJNA167428	167428	Proteobacteria	Gammaproteobacteria	6.01121	58.8	-	AOKA01	467	5733	5298	7/1/13	3/27/17	Scaffold	The New Zealand Institute for Plant & Food Research Limited	SAMN02470803	GCA_000416845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/845/GCA_000416845.2_ASM41684v2	-	ICMP 19102
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.37139	41.3	-	CEFC01	417	2330	2155	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233919	GCA_000941495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/495/GCA_000941495.1_Velvet_assembly	-	LS4I
Streptococcus agalactiae GB00679	1154930	PRJNA86533	86533	Terrabacteria group	Firmicutes	2.0185	35.3	-	ALTY01	40	2102	1942	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991168	GCA_000290475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/475/GCA_000290475.1_ASM29047v1	-	GB00679
Acinetobacter baumannii ABNIH2	992403	PRJNA63337	63337	Proteobacteria	Gammaproteobacteria	3.93809	39.1	-	AFTA01	125	3853	3690	8/1/11	3/15/17	Contig	NIH Intramural Sequencing Center	SAMN00857848	GCA_000222245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/245/GCA_000222245.2_ASM22224v2	21825119	ABNIH2
Pseudomonas aeruginosa BWHPSA014	1402514	PRJNA219875	219875	Proteobacteria	Gammaproteobacteria	6.29347	66.5	-	AXQO01	2	5929	5787	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360686	GCA_000481425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/425/GCA_000481425.1_Pseu_aeru_BWH014_V1	-	BWHPSA014
Shigella flexneri	623	PRJNA385907	385907	Proteobacteria	Gammaproteobacteria	4.51888	50.5	-	NGWG01	523	5306	4154	6/6/17	6/6/17	Contig	Christian Medical College	SAMN06920478	GCA_002174595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/595/GCA_002174595.1_ASM217459v1	-	FC1417
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.6941	35.1	-	JQQI01	332	4360	3877	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949516	GCA_001568965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/965/GCA_001568965.1_ASM156896v1	26833181	56135
Streptococcus pyogenes DSM 20565	1123316	PRJNA188899	188899	Terrabacteria group	Firmicutes	1.85874	38.3	-	ATXR01	31	1925	1818	7/9/13	3/24/17	Contig	DOE Joint Genome Institute	SAMN02440590	GCA_000421785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/785/GCA_000421785.1_ASM42178v1	-	DSM 20565
Neisseria meningitidis NM418	1095689	PRJNA76309	76309	Proteobacteria	Betaproteobacteria	2.29861	51.3	-	ANRK01	35	2635	2262	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055173	GCA_000328185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/185/GCA_000328185.2_ASM32818v2	-	NM418
Helicobacter pylori 98-10	544405	PRJNA30395	30395	Proteobacteria	delta/epsilon subdivisions	1.57177	38.8	-	ABSX01	51	1581	1393	12/9/08	3/22/17	Contig	Vanderbilt University School of Medicine	SAMN02472069	GCA_000172935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/935/GCA_000172935.1_ASM17293v1	19123947	98-10
Streptococcus pneumoniae GA44128	760820	PRJNA48799	48799	Terrabacteria group	Firmicutes	2.10582	39.7	-	AIKV01	9	2336	2077	3/7/12	3/8/17	Contig	Institute for Genome Sciences	SAMN00632910	GCA_000251745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/745/GCA_000251745.2_ASM25174v2	-	GA44128
Campylobacter jejuni	197	PRJNA288802	288802	Proteobacteria	delta/epsilon subdivisions	1.61666	30.6	chromosome:NZ_CP012149.1/CP012149.1	-	1	1676	1566	10/26/15	3/18/17	Complete Genome	University of Cambridge	SAMN03838469	GCA_001412295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/295/GCA_001412295.1_ASM141229v1	-	CJM1cam
Mycobacterium tuberculosis H37RvLP	757421	PRJNA47941	47941	Terrabacteria group	Actinobacteria	4.41017	65.3497	chromosome:NZ_CM002883.1/CM002883.1	JREW01	1	4330	4111	9/9/14	3/11/17	Chromosome	Texas A&M University	SAMN03020718	GCA_000751475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/475/GCA_000751475.1_H37RvLPb	20472797	H37RvLP
Mycobacterium avium subsp. hominissuis MAH 2721	1402214	PRJNA219506	219506	Terrabacteria group	Actinobacteria	5.21135	68.6	-	AWXJ01	2194	-	-	11/26/13	1/8/14	Contig	Robert Koch Institute	SAMN02470865	GCA_000499985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/985/GCA_000499985.1_MycAHom1.0	-	MAH 2721
Bacillus cereus	1396	PRJNA272317	272317	Terrabacteria group	Firmicutes	5.59424	34.9	-	JXDH01	238	5851	5454	3/2/15	3/25/17	Contig	MIT	SAMN03280714	GCA_000935235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/235/GCA_000935235.1_ASM93523v1	25858826	MIT0214
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.48457	32	-	LWBG01	84	2512	2396	4/15/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04605741	GCA_001622835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/835/GCA_001622835.1_ASM162283v1	-	LRKNS057
Listeria monocytogenes	1639	PRJNA320339	320339	Terrabacteria group	Firmicutes	2.99059	37.8	-	LXQW01	86	3037	2935	6/6/16	3/1/17	Scaffold	CSIRO	SAMN04932626	GCA_001658265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/265/GCA_001658265.1_ASM165826v1	-	2977
Yersinia pestis 5	755880	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.47807	47.6	-	ADPK01	1008	4333	3985	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403006	GCA_000323445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/445/GCA_000323445.1_ASM32344v1	23271803	5
Campylobacter jejuni subsp. jejuni 86605	889219	PRJNA52863	52863	Proteobacteria	delta/epsilon subdivisions	1.6384	30.4	-	AIOJ01	120	1733	1633	3/16/12	3/15/17	Contig	Cornell University	SAMN02429045	GCA_000254475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/475/GCA_000254475.2_ASM25447v2	-	86605
Campylobacter jejuni subsp. jejuni	32022	PRJNA283557	283557	Proteobacteria	delta/epsilon subdivisions	1.66457	30.6	chromosome:NZ_CP012689.1/CP012689.1	-	1	1736	1609	9/25/15	3/18/17	Complete Genome	USDA ARS	SAMN03652757	GCA_001299565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/565/GCA_001299565.1_ASM129956v1	26543130	RM3197
Staphylococcus aureus subsp. aureus H19	585155	PRJNA39233	39233	Terrabacteria group	Firmicutes	2.80792	32.8	-	ACSS01	13	2922	2704	12/10/09	3/2/17	Scaffold	Broad Institute	SAMN02595341	GCA_000162655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/655/GCA_000162655.1_ASM16265v1	-	H19
Staphylococcus aureus subsp. aureus M1015	585156	PRJNA39237	39237	Terrabacteria group	Firmicutes	2.78584	32.9	-	ACST01	20	2898	2725	12/10/09	3/2/17	Scaffold	Broad Institute	SAMN02595342	GCA_000162675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/675/GCA_000162675.1_ASM16267v1	-	M1015
Campylobacter jejuni subsp. jejuni	32022	PRJNA283556	283556	Proteobacteria	delta/epsilon subdivisions	1.66457	30.6	chromosome:NZ_CP012690.1/CP012690.1	-	1	1734	1611	9/25/15	3/18/17	Complete Genome	USDA ARS	SAMN03652743	GCA_001299595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/595/GCA_001299595.1_ASM129959v1	26543130	RM3196
Campylobacter jejuni subsp. jejuni LMG 23357	889246	PRJNA52917	52917	Proteobacteria	delta/epsilon subdivisions	1.67286	30.3	-	AIOK01	126	1764	1633	3/16/12	3/15/17	Contig	Cornell University	SAMN02428946	GCA_000254495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/495/GCA_000254495.2_ASM25449v2	-	LMG 23357
Yersinia pestis 5761	755860	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.26201	47.7	-	ADPL01	945	4020	3775	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403007	GCA_000323465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/465/GCA_000323465.1_ASM32346v1	23271803	5761
Listeria monocytogenes	1639	PRJNA320339	320339	Terrabacteria group	Firmicutes	3.02951	37.8	-	LXQX01	56	3071	2995	6/6/16	3/1/17	Scaffold	CSIRO	SAMN04932627	GCA_001658305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/305/GCA_001658305.1_ASM165830v1	-	2978
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.6939	31.8	-	LWBH01	90	2751	2598	4/15/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04605742	GCA_001622865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/865/GCA_001622865.1_ASM162286v1	-	LRKNS059
Bacillus cereus	1396	PRJNA260748	260748	Terrabacteria group	Firmicutes	5.55488	35.1	-	JYCK01	78	5902	5611	3/5/15	3/25/17	Contig	Los Alamos National Laboratory	SAMN03025785	GCA_000948245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/245/GCA_000948245.1_BFA_9_A	-	105Ne
Mycobacterium avium subsp. paratuberculosis 08-8281	1391998	PRJNA216937	216937	Terrabacteria group	Actinobacteria	4.87608	69.2	-	AYLX01	465	4638	3330	12/9/13	1/8/14	Contig	National Animal Disease Center	SAMN02470592	GCA_000504725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/725/GCA_000504725.1_MAP_8281_version_1	-	Aug-81
Mycobacterium tuberculosis H37RvMA	757418	PRJNA47935	47935	Terrabacteria group	Actinobacteria	4.41091	65.3996	chromosome:NZ_CM002884.1/CM002884.1	JREX01	1	4347	4111	9/9/14	3/11/17	Chromosome	Texas A&M University	SAMN03020719	GCA_000751615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/615/GCA_000751615.1_H37RvMA2	20472797	H37RvMA
Candidatus Pantoea carbekii	1235990	PRJDB572	222504	Proteobacteria	Gammaproteobacteria	1.15107	30.6	chromosome:NC_022547.1/AP012554.1	-	1	848	773	10/4/13	4/9/17	Complete Genome	"School of Pharmacy, Nihon University"	SAMD00015704	GCA_000478905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/905/GCA_000478905.1_ASM47890v1	-	-
Streptococcus pneumoniae GA44386	760824	PRJNA48837	48837	Terrabacteria group	Firmicutes	2.18594	39.6	-	AIKW01	13	2389	2097	3/7/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00718797	GCA_000251765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/765/GCA_000251765.2_ASM25176v2	-	GA44386
Neisseria meningitidis 2002038	1095692	PRJNA76315	76315	Proteobacteria	Betaproteobacteria	2.19621	51.8	-	ANRH01	33	2592	2185	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055184	GCA_000328205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/205/GCA_000328205.2_ASM32820v2	-	2002038
Streptococcus pyogenes UTMEM-1	1115811	PRJNA78605	78605	Terrabacteria group	Firmicutes	1.86966	38.2	-	AVCF01	54	1882	1761	8/22/13	3/24/17	Contig	J. Craig Venter Institute	SAMN00828757	GCA_000454105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/105/GCA_000454105.1_SpyogUTMEM-1v1.0	-	UTMEM-1
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.87448	35	-	JQQJ01	332	4495	4024	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949517	GCA_001568985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/985/GCA_001568985.1_ASM156898v1	26833181	56137
Pseudomonas aeruginosa BWHPSA013	1402513	PRJNA219874	219874	Proteobacteria	Gammaproteobacteria	6.70487	66.1	-	AXQP01	2	6359	6190	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360685	GCA_000481445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/445/GCA_000481445.1_Pseu_aeru_BWH013_V1	-	BWHPSA013
Acinetobacter baumannii ABNIH3	992404	PRJNA63339	63339	Proteobacteria	Gammaproteobacteria	4.06328	39.1	-	AFTB01	285	4022	3756	8/1/11	3/15/17	Contig	NIH Intramural Sequencing Center	SAMN00857859	GCA_000222265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/265/GCA_000222265.2_ASM22226v2	21825119	ABNIH3
Streptococcus agalactiae GB00865	1154932	PRJNA86537	86537	Terrabacteria group	Firmicutes	2.20426	35.3	-	ALUA01	45	2313	2172	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991165	GCA_000290495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/495/GCA_000290495.1_ASM29049v1	-	GB00865
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	1.98119	41.2	-	CEKQ01	66	1972	1879	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234030	GCA_000941515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/515/GCA_000941515.1_Velvet_assembly	-	S17H
Pseudomonas syringae pv. actinidiae ICMP 18886	1189623	PRJNA165719	165719	Proteobacteria	Gammaproteobacteria	6.03447	58.4	-	AOJT01	1755	6251	4970	7/1/13	3/24/17	Scaffold	Plant & Food Research	SAMN02470798	GCA_000416925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/925/GCA_000416925.1_ASM41692v1	-	ICMP 18886
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.22984	38.2	-	FJAW01	38	2945	2810	2/20/16	3/27/17	Contig	SC	SAMEA2059857	GCA_900052085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/085/GCA_900052085.1_10771_1_18	-	2531STDY5467299
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.56652	50.7	-	FTXM01	368	5131	4357	1/28/17	2/26/17	Contig	SC	SAMEA2056895	GCA_900158925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/925/GCA_900158925.1_9803_4_93	-	2090STDY5488141
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.2406	67	-	MUVS01	211	7957	7380	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001981	GCA_001993925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/925/GCA_001993925.1_ASM199392v1	-	VC15185
Burkholderia pseudomallei HBPUB10134a	1306418	PRJNA193333	193333	Proteobacteria	Betaproteobacteria	7.33105	68.1	-	AVAL01	124	7514	6956	8/21/13	3/24/17	Contig	Northern Arizona University	SAMN01983948	GCA_000452985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/985/GCA_000452985.1_BP10134a	-	HBPUB10134a
Bacillus thuringiensis serovar medellin	79672	PRJNA349211	349211	Terrabacteria group	Firmicutes	7.43774	34.6	-	MOOV01	295	8041	7293	5/17/17	6/16/17	Scaffold	Huazhong Agricultural University	SAMN05934574	GCA_002148155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/155/GCA_002148155.1_ASM214815v1	-	T30001
Vibrio cholerae O1 str. 2010EL-1792	925769	PRJNA60005	60005	Proteobacteria	Gammaproteobacteria	4.01499	47.5	-	AELJ01	105	3795	3672	11/12/10	3/22/17	Contig	Centers for Disease Control and Prevention	SAMN00138733	GCA_000166495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/495/GCA_000166495.2_ASM16649v2	-	2010EL-1792
Clostridioides difficile CD90	1151278	PRJNA85729	85729	Terrabacteria group	Firmicutes	4.02901	28.3	-	AVHI01	123	3760	3555	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766629	GCA_000451205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/205/GCA_000451205.2_ASM45120v2	-	CD90
Brucella abortus	235	PRJNA338234	338234	Proteobacteria	Alphaproteobacteria	3.25761	57.2	-	MIJJ01	26	3338	3119	10/28/16	3/28/17	Contig	NCDC	SAMN05526333	GCA_001856205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/205/GCA_001856205.1_ASM185620v1	-	Br.a-1844/12/12-Geo
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.94666	38	-	MLPS01	228	2011	1785	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297137	GCA_001869985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/985/GCA_001869985.1_ASM186998v1	27118061	AWRIB889
Vibrio parahaemolyticus S082	1394624	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	4.9981	45.3	-	AWKK01	555	4781	4568	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338938	GCA_000490635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/635/GCA_000490635.1_S082	-	S082
Klebsiella pneumoniae BIDMC 31	1328337	PRJNA202042	202042	Proteobacteria	Gammaproteobacteria	5.34003	57.3	-	JAPW01	6	5397	5063	1/23/14	2/21/17	Scaffold	Broad Institute	SAMN02138661	GCA_000521985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/985/GCA_000521985.1_Hafn_alve_BIDMC_31_V1	-	BIDMC 31
Clostridium botulinum D/C	1573941	PRJNA371745	371745	Terrabacteria group	Firmicutes	2.94211	27.9	-	MVIY01	121	2777	2601	3/3/17	3/6/17	Scaffold	Anses	SAMN06311447	GCA_002018055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/055/GCA_002018055.1_ASM201805v1	-	1274_DC
Enterococcus faecalis ATCC 6055	1169311	PRJNA157793	157793	Terrabacteria group	Firmicutes	3.22746	37.2	-	ASDZ01	31	3355	3168	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847627	GCA_000393375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/375/GCA_000393375.1_Ente_faec_ATCC_6055_V1	-	ATCC 6055
Streptococcus mutans	1309	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.00755	36.8	-	JVEO01	30	2006	1882	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197696	GCA_001073145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/145/GCA_001073145.1_ASM107314v1	26230489	503_SMUT
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14296	52.4	-	CQNH01	78	2508	2181	3/22/15	4/10/17	Contig	SC	SAMEA1690343	GCA_001159665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/665/GCA_001159665.1_8727_8_68	-	GCGS164
Enterococcus faecium EnGen0308	1158642	PRJNA89005	89005	Terrabacteria group	Firmicutes	2.52147	38.3	-	AJDM01	16	2597	2349	5/3/13	4/10/17	Scaffold	Broad Institute	SAMN00809244	GCA_000394555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/555/GCA_000394555.1_Ente_faec_EnGen0308_V1	-	EnGen0308
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.42241	66.4	-	DGCI01	62	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455686	GCA_002384535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/384/535/GCA_002384535.1_ASM238453v1	28894102	-
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.13002	41.2	-	CVXU01	75	2061	1886	6/23/15	3/26/17	Contig	SC	SAMEA1032982	GCA_001178585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/585/GCA_001178585.1_6817_2_84	-	EQUI0037
Polaribacter sp. MED152	313598	PRJNA13543	13543	FCB group	Bacteroidetes/Chlorobi group	2.96147	30.6	chromosome:NC_020830.1/CP004349.1	-	1	2686	2615	3/29/13	4/17/17	Complete Genome	The Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN02603920	GCA_000152945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/945/GCA_000152945.2_ASM15294v2	"1,721,584,318,552,170"	MED152
Corynebacterium diphtheriae	1717	PRJNA341832	341832	Terrabacteria group	Actinobacteria	2.45379	53.6	-	MIOM01	74	2414	2215	11/10/16	8/24/17	Scaffold	National Institute for Communicable Diseases	SAMN05729428	GCA_001876115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/115/GCA_001876115.1_ASM187611v1	28726616	ST378-KZN-2015-45788
Lactobacillus plantarum	1590	PRJNA326998	326998	Terrabacteria group	Firmicutes	3.39182	44.3	-	MAMT01	50	3308	3139	8/13/16	3/28/17	Scaffold	Northwest A&F University	SAMN05300206	GCA_001704595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/595/GCA_001704595.1_ASM170459v1	-	PC520
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.00868	60.1	-	FCMU01	19	4752	4595	1/21/16	3/27/17	Scaffold	SC	SAMEA2274086	GCA_001537805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/805/GCA_001537805.1_12082_5_51	-	2880STDY5683016
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.8963	31	-	JOUL01	165	2025	1872	11/10/15	3/18/17	Contig	FDA	SAMN02693039	GCA_001441765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/765/GCA_001441765.1_Campylobacter_coli_CVM_N23169_v1.0	-	CVM N23169
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.79032	56	-	JVQI01	66	4604	4443	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197390	GCA_001055835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/835/GCA_001055835.1_ASM105583v1	26230489	198_ECLO
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.20887	64.2	-	FRZY01	38	5229	5077	12/14/16	3/21/17	Contig	SC	SAMEA2070545	GCA_900131245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/245/GCA_900131245.1_10665_3_69	-	239
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.16872	67.5	-	LPHM01	80	6461	6136	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449538	GCA_001531615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/615/GCA_001531615.1_ASM153161v1	-	MSMB2107WGS
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.09334	55	-	LPPB01	69	5056	4828	12/21/15	3/27/17	Contig	JCVI	SAMN04252933	GCA_001472795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/795/GCA_001472795.1_SMART_834.v1	-	SMART_834
Pseudomonas sp. NBRC 111121	1661036	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	6.2843	61.5	-	BCAX01	131	5918	5678	10/3/15	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00031656	GCA_001320165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/165/GCA_001320165.1_ASM132016v1	-	NBRC 111121
Streptomyces sp. NRRL F-3273	1463848	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.24982	72.5	-	JOIO01	568	7069	6742	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645509	GCA_000720065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/065/GCA_000720065.1_ASM72006v1	-	NRRL F-3273
Bacillus sp. FJAT-21351	1581029	PRJNA293488	293488	Terrabacteria group	Firmicutes	6.05709	37.6	-	LITO01	22	6238	5911	8/31/15	4/11/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04004250	GCA_001275665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/665/GCA_001275665.1_ASM127566v1	-	FJAT-21351
Acinetobacter sp. N54.MGS-139	1637509	PRJNA277012	277012	Proteobacteria	Gammaproteobacteria	2.17168	49.3	-	LARN01	208	-	-	4/24/15	6/10/15	Contig	The Mayo Clinic	SAMN03450005	GCA_000980495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/980/495/GCA_000980495.1_ASM98049v1	26021920	-
Clostridium sp. CAG:62_40_43	1896990	PRJNA321218	321218	Terrabacteria group	Firmicutes	2.48878	40.6	-	MNSA01	24	2289	2208	12/23/16	12/23/16	Scaffold	None	SAMN05717258	GCA_001916225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/916/225/GCA_001916225.1_ASM191622v1	27819664	-
Staphylococcus sp. HMSC72E08	1608899	PRJNA274551	274551	Terrabacteria group	Firmicutes	2.77043	32.7	-	LTLW01	63	2881	2745	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498889	GCA_001839285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/285/GCA_001839285.1_ASM183928v1	-	HMSC72E08
Mycobacterium tuberculosis complex sp. (ex Procavia capensis) 49	1871906	PRJNA327952	327952	Terrabacteria group	Actinobacteria	4.39959	65.5	-	MBDF01	176	4367	4064	10/24/16	4/13/17	Scaffold	USDA Animal Plant Health Inspection Service-National Veterinary Services Laboratories	SAMN05362572	GCA_001835505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/505/GCA_001835505.1_ASM183550v1	-	49
Mycobacterium tuberculosis complex sp. (ex Procavia capensis) 47	1871904	PRJNA327952	327952	Terrabacteria group	Actinobacteria	4.33182	65.5	-	MBDD01	252	4355	4041	10/24/16	4/13/17	Scaffold	USDA Animal Plant Health Inspection Service-National Veterinary Services Laboratories	SAMN05362535	GCA_001835515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/515/GCA_001835515.1_ASM183551v1	-	47
Staphylococcus sp. HMSC73A05	1608900	PRJNA274552	274552	Terrabacteria group	Firmicutes	2.71683	32.7	-	LTLV01	82	2785	2630	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498888	GCA_001839325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/325/GCA_001839325.1_ASM183932v1	-	HMSC73A05
Clostridium sp. UBA871	1946380	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.70603	29.8	-	DBFV01	11	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455325	GCA_002295255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/255/GCA_002295255.1_ASM229525v1	28894102	-
Acinetobacter sp. PT1	1866914	PRJNA323729	323729	Proteobacteria	Gammaproteobacteria	2.32403	42.2	-	MAIJ01	1217	-	-	7/1/16	7/1/16	Contig	University of KwaZulu-Natal	SAMN05210896	GCA_001678045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/045/GCA_001678045.1_PT1	-	-
Bacillus sp. FJAT-22058	1581037	PRJNA293648	293648	Terrabacteria group	Firmicutes	5.4795	40.5	-	LIUR01	11	5300	5019	9/1/15	4/17/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04009110	GCA_001277335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/335/GCA_001277335.1_ASM127733v1	-	FJAT-22058
Streptomyces sp. NRRL F-3213	1463846	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.65883	69.5	-	JOIQ01	111	8958	8725	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645511	GCA_000720075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/075/GCA_000720075.1_ASM72007v1	-	NRRL F-3213
Pseudomonas sp. NBRC 111123	1661038	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	5.67246	62.9	-	BCAZ01	108	5212	5007	10/3/15	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00031658	GCA_001320205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/205/GCA_001320205.1_ASM132020v1	-	NBRC 111123
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.30091	54.6	-	LPPA01	124	5318	5039	12/21/15	3/27/17	Contig	JCVI	SAMN04252934	GCA_001472815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/815/GCA_001472815.1_SMART_843.v1	-	SMART_843
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.31076	67.5	-	LPHN01	64	5796	5498	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449539	GCA_001531665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/665/GCA_001531665.1_ASM153166v1	-	MSMB2108WGS
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.02494	64.2	-	FVCO01	10	5040	4918	3/10/17	3/18/17	Contig	SC	SAMEA2071303	GCA_900131265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/265/GCA_900131265.1_10665_3_71	-	241
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.82494	56.2	-	JVIL01	84	4724	4513	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197595	GCA_001056585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/585/GCA_001056585.1_ASM105658v1	26230489	405_ECLO
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.82884	31.1	-	JOUR01	124	1911	1795	11/10/15	3/18/17	Contig	FDA	SAMN02693025	GCA_001441815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/815/GCA_001441815.1_Campylobacter_coli_CVM_N3506_v1.0	-	CVM N3506
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.01035	60.2	-	FCGR01	14	4720	4577	1/21/16	3/27/17	Scaffold	SC	SAMEA2274099	GCA_001537825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/825/GCA_001537825.1_12045_8_21	-	2880STDY5683030
Lactobacillus plantarum	1590	PRJNA328074	328074	Terrabacteria group	Firmicutes	3.21803	44.5	-	MAXE01	24	3094	2949	8/14/16	3/28/17	Scaffold	Northwest A&F University	SAMN05363625	GCA_001704645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/645/GCA_001704645.1_ASM170464v1	-	XJ25
Corynebacterium diphtheriae	1717	PRJNA341832	341832	Terrabacteria group	Actinobacteria	2.2201	53.6	-	MIYO01	86	2170	1990	11/10/16	8/24/17	Scaffold	National Institute for Communicable Diseases	SAMN05729412	GCA_001876145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/145/GCA_001876145.1_ASM187614v1	28726616	ST378-KZN-2015-45462
Thermodesulfobacterium geofontis OPF15	795359	PRJNA67515	67515	Thermodesulfobacteria	Thermodesulfobacteria	1.63438	30.6	chromosome:NC_015682.1/CP002829.1	-	1	1688	1617	6/7/11	4/7/17	Complete Genome	US DOE Joint Genome Institute	SAMN02232058	GCA_000215975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/975/GCA_000215975.1_ASM21597v1	23580711	OPF15
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12698	41.2	-	CWCJ01	71	2059	1878	6/23/15	3/26/17	Contig	SC	SAMEA1032984	GCA_001178605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/605/GCA_001178605.1_6903_5_94	-	EQUI0143
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.64399	66.2	-	DGIP01	348	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457692	GCA_002386405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/405/GCA_002386405.1_ASM238640v1	28894102	-
Enterococcus faecium EnGen0320	1158644	PRJNA89009	89009	Terrabacteria group	Firmicutes	2.8617	37.9	-	AJDO01	21	2956	2762	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809200	GCA_000394575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/575/GCA_000394575.1_Ente_faec_UAA949_V1	-	UAA949
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.09828	52.6	-	CQIN01	75	2477	2125	3/22/15	4/10/17	Contig	SC	SAMEA1690486	GCA_001160525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/525/GCA_001160525.1_8289_2_92	-	GCGS092
Streptococcus mutans	1309	PRJDB5660	385305	Terrabacteria group	Firmicutes	2.00311	36.9	-	BDOS01	1	2025	1864	5/2/17	5/31/17	Scaffold	"Department of Pediatric Dentistry, Nagasaki University Graduate School of Biomedical Sciences"	SAMD00078033	GCA_002157665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/665/GCA_002157665.1_ASM215766v1	-	HM
Enterococcus faecalis ATCC 10100	1169312	PRJNA157795	157795	Terrabacteria group	Firmicutes	3.00495	37.4	-	ASEA01	6	3030	2876	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847628	GCA_000393395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/395/GCA_000393395.1_Ente_faec_ATCC_10100_V1	-	ATCC 10100
Clostridium botulinum D/C	1573941	PRJNA371745	371745	Terrabacteria group	Firmicutes	2.75012	28	-	MVJC01	128	2577	2417	3/3/17	3/6/17	Scaffold	Anses	SAMN06311463	GCA_002018095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/095/GCA_002018095.1_ASM201809v1	-	CP05_DC
Klebsiella pneumoniae subsp. pneumoniae SA1	1379688	PRJEB4361	221850	Proteobacteria	Gammaproteobacteria	5.49928	57.2	-	CBTW01	1	5453	5227	1/6/14	2/21/17	Scaffold	INSTITUT PASTEUR	SAMEA3138861	GCA_000529645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/645/GCA_000529645.1_LPSB1_2557	-	SA1
Vibrio parahaemolyticus S081	1394623	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.05831	45.3	-	AWKL01	493	4823	4612	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338937	GCA_000490655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/655/GCA_000490655.1_S081	-	S081
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.96988	38	-	MLPV01	236	2083	1836	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297141	GCA_001870015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/015/GCA_001870015.1_ASM187001v1	27118061	AWRIB900
Brucella abortus	235	PRJNA338234	338234	Proteobacteria	Alphaproteobacteria	3.25632	57.2	-	MIJM01	26	3329	3115	10/28/16	3/28/17	Contig	NCDC	SAMN05526411	GCA_001856215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/215/GCA_001856215.1_ASM185621v1	-	Br.a-1236-10-Geo
Clostridioides difficile CD92	1151279	PRJNA85731	85731	Terrabacteria group	Firmicutes	4.04313	28.4	-	AVHJ01	414	3789	3597	8/20/13	4/21/17	Contig	Institute for Genome Sciences	SAMN01766630	GCA_000451225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/225/GCA_000451225.1_ASM45122v1	-	CD92
Vibrio cholerae 12129(1)	592313	PRJNA33561	33561	Proteobacteria	Gammaproteobacteria	3.96951	47.7	-	ACFQ01	12	3796	3534	5/1/09	3/22/17	Contig	"Los Alamos National Laboratory, National Microbial Pathogen Data Resource (NMPDR)"	SAMN02393812	GCA_000174115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/115/GCA_000174115.1_ASM17411v1	-	12129(1)
Bacillus thuringiensis	1428	PRJNA388543	388543	Terrabacteria group	Firmicutes	6.51206	34.7	-	NHZG01	289	7060	6488	7/28/17	8/1/17	Scaffold	Hunan Institute of Microbiology	SAMN07178571	GCA_002236945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/236/945/GCA_002236945.1_ASM223694v1	-	HD133
Burkholderia pseudomallei HBPUB10303a	1306419	PRJNA193334	193334	Proteobacteria	Betaproteobacteria	7.33966	68.1	-	AVAM01	116	7532	6964	8/21/13	3/24/17	Contig	Northern Arizona University	SAMN01983949	GCA_000453005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/005/GCA_000453005.1_BP10303a	-	HBPUB10303a
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.41353	67	-	MUVT01	177	8120	7534	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001982	GCA_001993945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/945/GCA_001993945.1_ASM199394v1	-	VC15442
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.46883	50.8	-	FTXO01	379	5022	4246	1/28/17	2/26/17	Contig	SC	SAMEA2059499	GCA_900158945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/945/GCA_900158945.1_9803_4_95	-	2090STDY5488143
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.57664	38.3	-	FJCX01	38	3279	3124	2/20/16	3/27/17	Contig	SC	SAMEA2064365	GCA_900052095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/095/GCA_900052095.1_10771_3_13	-	2531STDY5467390
Pseudomonas syringae pv. actinidiae ICMP 18801	1194078	PRJNA167321	167321	Proteobacteria	Gammaproteobacteria	6.15941	58.6	-	AOKQ01	631	5879	5429	7/1/13	3/24/17	Scaffold	The New Zealand Institute for Plant & Food Research Limited	SAMN02470804	GCA_000416945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/945/GCA_000416945.1_ASM41694v1	-	ICMP 18801
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.00838	41.5	-	CEGT01	76	1946	1844	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233945	GCA_000941555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/555/GCA_000941555.1_Velvet_assembly	-	type strain: LS7
Streptococcus agalactiae GB00893	1154939	PRJNA86551	86551	Terrabacteria group	Firmicutes	2.08855	35.1	-	ALUH01	31	2129	2022	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993715	GCA_000290515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/515/GCA_000290515.1_ASM29051v1	-	GB00893
Acinetobacter baumannii ABNIH4	992405	PRJNA63341	63341	Proteobacteria	Gammaproteobacteria	3.98875	39.2	-	AFTC01	184	3973	3650	8/1/11	3/15/17	Contig	NIH Intramural Sequencing Center	SAMN00857901	GCA_000222285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/285/GCA_000222285.2_ASM22228v2	21825119	ABNIH4
Pseudomonas aeruginosa BWHPSA012	1402512	PRJNA219873	219873	Proteobacteria	Gammaproteobacteria	6.49205	66.3	-	AXQQ01	4	6131	5990	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360684	GCA_000481465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/465/GCA_000481465.1_Pseu_aeru_BWH012_V1	-	BWHPSA012
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.66766	34.9	-	JQQO01	321	4222	3773	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949523	GCA_001568995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/568/995/GCA_001568995.1_ASM156899v1	26833181	56603
Streptococcus pyogenes GA41394	1115822	PRJNA78627	78627	Terrabacteria group	Firmicutes	1.79737	38.4	-	AWTJ01	44	1838	1711	10/25/13	3/24/17	Contig	J. Craig Venter Institute	SAMN02436480	GCA_000483585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/585/GCA_000483585.1_SpyogGA41394v1.0	-	GA41394
Neisseria meningitidis 70012	1095695	PRJNA76321	76321	Proteobacteria	Betaproteobacteria	2.24121	51.6	-	ANRE01	24	2623	2221	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055187	GCA_000328225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/225/GCA_000328225.2_ASM32822v2	-	70012
Helicobacter pylori NAD1	1156915	PRJNA85619	85619	Proteobacteria	delta/epsilon subdivisions	1.60356	38.9	-	AJGJ02	103	1587	1432	3/26/12	3/23/17	Contig	University of Hyderabad	SAMN02471796	GCA_000256035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/035/GCA_000256035.2_ASM25603v2	23045484	NAD1
Streptococcus pneumoniae GA47179	760829	PRJNA48847	48847	Terrabacteria group	Firmicutes	2.12882	39.6	-	AIKX01	14	2320	2047	3/7/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00717565	GCA_000251785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/785/GCA_000251785.2_ASM25178v2	-	GA47179
Campylobacter jejuni subsp. jejuni M1	645464	PRJNA38041	38041	Proteobacteria	delta/epsilon subdivisions	1.61665	30.6	chromosome:NC_017280.1/CP001900.1	-	1	1678	1550	9/28/10	3/15/17	Complete Genome	Danish Technical University	SAMN02603174	GCA_000148705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/705/GCA_000148705.1_ASM14870v1	20865039	M1
Mycobacterium tuberculosis	1773	PRJNA317008	317008	Terrabacteria group	Actinobacteria	4.41742	65.5928	chromosome:NZ_CM007645.1/CM007645.1	LWDQ01	3	4288	4105	1/23/17	2/27/17	Chromosome	Facultad de Agronomia. Universidad de Buenos Aires	SAMN04595071	GCA_001969025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/025/GCA_001969025.1_ASM196902v1	-	6548
Mycobacterium avium subsp. paratuberculosis 10-5864	1391996	PRJNA216935	216935	Terrabacteria group	Actinobacteria	4.81497	69.3	-	AYNV01	567	4609	3644	12/9/13	1/8/14	Contig	National Animal Disease Center	SAMN02470580	GCA_000504845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/845/GCA_000504845.1_MAP_5864_version_1	-	Oct-64
Bacillus cereus	1396	PRJNA260737	260737	Terrabacteria group	Firmicutes	6.22518	34.6	-	JYCM01	150	6678	6247	3/5/15	3/25/17	Contig	Los Alamos National Laboratory	SAMN03025776	GCA_000948345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/345/GCA_000948345.1_BFA_11_A	-	Lr 4/2
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.71686	31.8	-	LWBI01	68	2801	2625	4/15/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04606872	GCA_001622875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/875/GCA_001622875.1_ASM162287v1	-	LRKNS068
Listeria monocytogenes	1639	PRJNA320339	320339	Terrabacteria group	Firmicutes	3.08199	37.8	-	LXQY01	63	3144	3051	6/6/16	3/1/17	Scaffold	CSIRO	SAMN04932628	GCA_001658325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/325/GCA_001658325.1_ASM165832v1	-	2981
Yersinia pestis 620024	755881	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.50379	47.6	-	ADPM01	1131	4318	3922	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403008	GCA_000323485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/485/GCA_000323485.1_ASM32348v1	23271803	620024
Campylobacter jejuni subsp. jejuni ATCC 33560	889247	PRJNA52919	52919	Proteobacteria	delta/epsilon subdivisions	1.71246	30.2	-	AIOL01	220	1806	1615	3/16/12	3/15/17	Contig	Cornell University	SAMN02428947	GCA_000254515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/515/GCA_000254515.2_ASM25451v2	-	ATCC 33560
Campylobacter jejuni subsp. doylei 269.97	360109	PRJNA17163	17163	Proteobacteria	delta/epsilon subdivisions	1.84511	30.6	chromosome:NC_009707.1/CP000768.1	-	1	1968	1732	7/20/07	4/17/17	Complete Genome	TIGR	SAMN02604056	GCA_000017485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/485/GCA_000017485.1_ASM1748v1	-	269.97
Staphylococcus aureus subsp. aureus M899	585159	PRJNA39239	39239	Terrabacteria group	Firmicutes	2.78797	32.9	-	ACSU01	18	2897	2728	12/10/09	3/2/17	Scaffold	Broad Institute	SAMN02595343	GCA_000162695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/695/GCA_000162695.1_ASM16269v1	-	M899
Staphylococcus aureus subsp. aureus WBG10049	585160	PRJNA39241	39241	Terrabacteria group	Firmicutes	2.8008	32.8	-	ACSV01	12	2869	2706	12/10/09	3/2/17	Scaffold	Broad Institute	SAMN02595344	GCA_000162715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/715/GCA_000162715.1_ASM16271v1	-	WBG10049
Clostridium pasteurianum BC1	86416	PRJNA80	80	Terrabacteria group	Firmicutes	5.0441	30.582	chromosome:NC_021182.1/CP003261.1; plasmid pCLOPA01:NC_021183.1/CP003262.1	-	2	4761	4495	5/6/13	4/1/17	Complete Genome	Brookhaven National Laboratory	SAMN02602952	GCA_000389635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/635/GCA_000389635.1_ASM38963v1	-	BC1
Campylobacter jejuni subsp. jejuni LMG 9081	889248	PRJNA52921	52921	Proteobacteria	delta/epsilon subdivisions	1.59384	30.5	-	AIOM01	108	1668	1560	3/16/12	3/15/17	Contig	Cornell University	SAMN02429011	GCA_000254535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/535/GCA_000254535.2_ASM25453v2	-	LMG 9081
Yersinia pestis 7	755889	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.53962	47.5	-	ADPN01	768	4256	4057	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403009	GCA_000323505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/505/GCA_000323505.1_ASM32350v1	23271803	7
Listeria monocytogenes	1639	PRJNA320339	320339	Terrabacteria group	Firmicutes	2.97251	37.8	-	LXRA01	28	3041	2953	6/6/16	3/1/17	Scaffold	CSIRO	SAMN04932630	GCA_001658345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/345/GCA_001658345.1_ASM165834v1	-	Lm15-001
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.71766	31.8	-	LWBJ01	65	2778	2621	4/15/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04606875	GCA_001622905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/905/GCA_001622905.1_ASM162290v1	-	LRKNS072
Bacillus cereus	1396	PRJNA280692	280692	Terrabacteria group	Firmicutes	5.46765	35.2	-	LBBY01	96	5883	5530	5/4/15	3/26/17	Contig	Korea Food Research Institute	SAMN03466681	GCA_000987785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/987/785/GCA_000987785.1_ASM98778v1	-	KS100Bc
Mycobacterium avium subsp. paratuberculosis 10-8425	1391994	PRJNA216931	216931	Terrabacteria group	Actinobacteria	4.51689	68.9	-	AYNX01	1499	4552	4028	12/9/13	1/8/14	Contig	National Animal Disease Center	SAMN02470579	GCA_000504885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/885/GCA_000504885.1_MAP_8425_version_1	-	Oct-25
Mycobacterium tuberculosis	1773	PRJNA317009	317009	Terrabacteria group	Actinobacteria	4.41603	65.5935	chromosome:NZ_CM007646.1/CM007646.1	LWDR01	3	4283	4103	1/23/17	2/27/17	Chromosome	Facultad de Agronomia. Universidad de Buenos Aires	SAMN04595072	GCA_001969035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/035/GCA_001969035.1_ASM196903v1	-	410
Campylobacter jejuni	197	PRJNA392692	392692	Proteobacteria	delta/epsilon subdivisions	1.70489	30.5602	chromosome:NZ_CP022470.1/CP022470.1; plasmid pRM1246_ERRC:NZ_CP022471.1/CP022471.1	-	2	1789	1692	7/27/17	8/1/17	Complete Genome	U.S. Department of Agriculture 	SAMN07304762	GCA_002234455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/234/455/GCA_002234455.1_ASM223445v1	15956396	RM1246-ERRC
Streptococcus pneumoniae GA47210	760830	PRJNA48849	48849	Terrabacteria group	Firmicutes	2.12238	39.6	-	AIKY01	7	2317	2057	3/7/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00718792	GCA_000251805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/805/GCA_000251805.2_ASM25180v2	-	GA47210
Helicobacter pylori NAB47	1156914	PRJNA85617	85617	Proteobacteria	delta/epsilon subdivisions	1.58592	39.1	-	AJFA02	107	1585	1413	3/26/12	3/23/17	Contig	University of Hyderabad	SAMN02471794	GCA_000256075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/075/GCA_000256075.2_ASM25607v2	23045484	NAB47
Neisseria meningitidis 68094	1095698	PRJNA76327	76327	Proteobacteria	Betaproteobacteria	2.20681	51.7	-	ANRB01	27	2561	2173	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055193	GCA_000328245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/245/GCA_000328245.2_ASM32824v2	-	68094
Streptococcus pyogenes GA40377	1115823	PRJNA78629	78629	Terrabacteria group	Firmicutes	1.85569	38.2	-	AWTK01	40	1891	1728	10/25/13	3/24/17	Contig	J. Craig Venter Institute	SAMN02436564	GCA_000483605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/605/GCA_000483605.1_SpyogGA40377v1.0	-	GA40377
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.61958	34.9	-	JQQM01	233	4194	3831	2/24/16	3/27/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949521	GCA_001569005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/005/GCA_001569005.1_ASM156900v1	26833181	56601
Pseudomonas aeruginosa BWHPSA011	1402511	PRJNA219872	219872	Proteobacteria	Gammaproteobacteria	7.06758	65.7	-	AXQR01	11	6784	6583	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360683	GCA_000481485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/485/GCA_000481485.1_Pseu_aeru_BWH011_V1	-	BWHPSA011
Acinetobacter baumannii AB5256	1116235	PRJNA77023	77023	Proteobacteria	Gammaproteobacteria	4.15801	39	-	AHAI01	50	4016	3781	1/6/12	5/18/17	Contig	University of Maryland School of Medicine	SAMN02435969	GCA_000241705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/705/GCA_000241705.2_ASM24170v2	22374953	AB5256
Streptococcus agalactiae GB00897	1154941	PRJNA86555	86555	Terrabacteria group	Firmicutes	2.04472	35	-	ALUI01	284	2209	1973	8/15/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991437	GCA_000290535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/290/535/GCA_000290535.1_ASM29053v1	-	GB00897
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03706	41.2	-	CEKJ01	66	2019	1918	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233979	GCA_000941655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/655/GCA_000941655.1_Velvet_assembly	-	S10Y
Pseudomonas syringae pv. syringae	321	PRJNA287076	287076	Proteobacteria	Gammaproteobacteria	5.90111	59.1	-	LGKU01	23	5259	5040	9/18/15	3/26/17	Scaffold	University of Toronto	SAMN03837777	GCA_001293665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/665/GCA_001293665.1_PsA2	-	A2
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.41139	38.3	-	FJFX01	19	3116	3011	2/20/16	3/27/17	Contig	SC	SAMEA1971898	GCA_900052105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/105/GCA_900052105.1_10625_2_3	-	2532STDY5467476
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.45719	50.8	-	FTXQ01	368	4925	4228	1/28/17	2/26/17	Contig	SC	SAMEA2056896	GCA_900158955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/955/GCA_900158955.1_9803_4_96	-	2090STDY5488144
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.00529	67.1	-	MUVU01	138	7703	7308	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001983	GCA_001993975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/975/GCA_001993975.1_ASM199397v1	-	VC6356
Burkholderia pseudomallei str. NCTC 13392 substr. morphotype_1	1343557	PRJNA177938	177938	Proteobacteria	Betaproteobacteria	7.08506	68.2	-	AUVI01	176	7414	6842	8/26/13	3/24/17	Contig	JCVI	SAMN01768107	GCA_000454565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/565/GCA_000454565.1_Final_Assembly	24201202	NCTC 13392 substr. morphotype_1
Bacillus thuringiensis	1428	PRJEB14962	336312	Terrabacteria group	Firmicutes	5.97248	35	-	FMBI01	73	6200	5784	8/3/16	6/15/17	Scaffold	INRA-MIG	SAMEA4361529	GCA_900094685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/685/GCA_900094685.1_ASM90009468v1	-	IEBC_T61001
Vibrio cholerae TM 11079-80	593586	PRJNA33579	33579	Proteobacteria	Gammaproteobacteria	4.05514	47.7	-	ACHW01	35	3901	3618	5/1/09	3/22/17	Contig	"Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR)"	SAMN02393813	GCA_000174255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/255/GCA_000174255.1_ASM17425v1	-	TM 11079-80
Clostridioides difficile CD104	1151280	PRJNA85733	85733	Terrabacteria group	Firmicutes	4.06172	28.4	-	AVHK01	54	3715	3508	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766568	GCA_000451245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/245/GCA_000451245.2_ASM45124v2	-	CD104
Brucella abortus	235	PRJNA338234	338234	Proteobacteria	Alphaproteobacteria	3.25973	57.2	-	MIJN01	30	3340	3125	10/28/16	3/28/17	Contig	NCDC	SAMN05526412	GCA_001856265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/265/GCA_001856265.1_ASM185626v1	-	Br.a-375-10-Geo
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.08966	38.1	-	MLPX01	418	2130	1876	11/7/16	3/28/17	Contig	Australian Wine Research Institute	SAMN04297143	GCA_001870035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/035/GCA_001870035.1_ASM187003v1	27118061	AWRIB950
Vibrio parahaemolyticus S079	1394622	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.1134	45.2	-	AWKM01	664	4907	4642	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338936	GCA_000490675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/675/GCA_000490675.1_S079	-	S079
Klebsiella pneumoniae subsp. pneumoniae BJ1-GA	1379687	PRJEB4360	221839	Proteobacteria	Gammaproteobacteria	5.4325	57.3	-	CBTU01	1	5355	5069	1/6/14	2/21/17	Scaffold	INSTITUT PASTEUR	SAMEA3138863	GCA_000529705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/705/GCA_000529705.1_LPSB6_2558	-	BJ1-GA
Clostridium botulinum D/C	1573941	PRJNA371745	371745	Terrabacteria group	Firmicutes	2.93529	27.9	-	MVIZ01	130	2762	2596	3/3/17	3/6/17	Scaffold	Anses	SAMN06311448	GCA_002018115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/115/GCA_002018115.1_ASM201811v1	-	1275_DC
Enterococcus faecalis EnGen0338	1169313	PRJNA157801	157801	Terrabacteria group	Firmicutes	3.21273	37.3	-	ASED01	32	3335	3140	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847631	GCA_000393455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/455/GCA_000393455.1_Ente_faec_SF21520_V1	-	SF21520
Streptococcus mutans	1309	PRJNA377637	377637	Terrabacteria group	Firmicutes	2.08493	37.2	-	NBFI01	40	2015	1917	6/30/17	7/3/17	Scaffold	Peking University School of Stomatology	SAMN06464163	GCA_002212935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/935/GCA_002212935.1_ASM221293v1	-	PKUSS-9
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14066	52.4	-	CQNV01	79	2502	2185	3/22/15	4/10/17	Contig	SC	SAMEA1690422	GCA_001160885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/885/GCA_001160885.1_8289_2_91	-	GCGS091
Enterococcus faecium EnGen0322	1158645	PRJNA89011	89011	Terrabacteria group	Firmicutes	3.04776	37.8	-	AJDP01	27	3174	2940	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809201	GCA_000394595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/595/GCA_000394595.1_Ente_faec_UAA950_V1	-	UAA950
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.72676	67.1	-	DGKS01	191	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455505	GCA_002387785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/785/GCA_002387785.1_ASM238778v1	28894102	-
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.17485	41.1	-	CVYH01	83	2111	1949	6/24/15	3/26/17	Contig	SC	SAMEA1032986	GCA_001178625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/625/GCA_001178625.1_6817_2_95	-	EQUI0048
Campylobacter jejuni subsp. jejuni ICDCCJ07001	757425	PRJNA47949	47949	Proteobacteria	delta/epsilon subdivisions	1.70892	30.551	chromosome:CP002029.1; plasmid pTet:CP002030.1	-	2	1669	1531	12/14/10	1/30/14	Complete Genome	Dept. of  Diagnosis for Infectious Disease	SAMN02603201	GCA_000184085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/184/085/GCA_000184085.1_ASM18408v1	-	ICDCCJ07001
Corynebacterium diphtheriae	1717	PRJNA341832	341832	Terrabacteria group	Actinobacteria	2.21154	53.6	-	MIYQ01	84	2163	1980	11/10/16	8/24/17	Scaffold	National Institute for Communicable Diseases	SAMN05729430	GCA_001876165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/165/GCA_001876165.1_ASM187616v1	28726616	ST378-KZN-2015-45903
Lactobacillus plantarum	1590	PRJNA296751	296751	Terrabacteria group	Firmicutes	3.16562	44.7	-	MJAM01	25	3081	2932	9/23/16	3/28/17	Scaffold	CSIR-CFTRI	SAMN04155596	GCA_001742965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/965/GCA_001742965.1_ASM174296v1	-	Kanjika2007
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.05336	60	-	FCGH01	19	4812	4657	1/21/16	3/27/17	Scaffold	SC	SAMEA2273896	GCA_001537845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/845/GCA_001537845.1_12082_2_32	-	2880STDY5682823
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.74449	31.5	-	JOUT01	577	1920	1637	11/10/15	3/18/17	Contig	FDA	SAMN02693046	GCA_001441825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/825/GCA_001441825.1_Campylobacter_coli_CVM_N4517_v1.0	-	CVM N4517
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.68032	55.1	-	JVAE01	52	4479	4337	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197810	GCA_001057545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/545/GCA_001057545.1_ASM105754v1	26230489	61_ECLO
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.39856	64.1	-	FVCH01	59	5528	5322	3/10/17	3/18/17	Contig	SC	SAMEA2070546	GCA_900131275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/275/GCA_900131275.1_10665_3_72	-	242
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.70267	67.2	-	LPHO01	165	7060	6639	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449540	GCA_001531675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/675/GCA_001531675.1_ASM153167v1	-	MSMB2109WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.37463	55	-	LPOZ01	115	5468	5192	12/21/15	3/27/17	Contig	JCVI	SAMN04252935	GCA_001472835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/835/GCA_001472835.1_SMART_851.v1	-	SMART_851
Pseudomonas sp. NBRC 111124	1661039	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	6.08938	62.4	-	BCBA01	109	5632	5409	10/3/15	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00031659	GCA_001320245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/245/GCA_001320245.1_ASM132024v1	-	NBRC 111124
Streptomyces sp. NRRL F-2580	1463841	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.44576	71.8	-	JOIR01	156	7863	7278	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645512	GCA_000720115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/115/GCA_000720115.1_ASM72011v1	-	NRRL F-2580
Bacillus sp. FJAT-21352	1581030	PRJNA293649	293649	Terrabacteria group	Firmicutes	5.53702	40.5	-	LIUS01	8	5334	5067	9/1/15	4/11/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04009126	GCA_001277355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/355/GCA_001277355.1_ASM127735v1	-	FJAT-21352
Acinetobacter sp. JdFR-94	1934978	PRJNA269163	269163	Proteobacteria	Gammaproteobacteria	0.368906	37.8	-	MTPD01	117	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226411	GCA_002010875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/875/GCA_002010875.1_ASM201087v1	28350381	-
Clostridium sp. UBA701	1946375	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.97949	36.2	-	DBMJ01	23	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453164	GCA_002298125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/125/GCA_002298125.1_ASM229812v1	28894102	-
Staphylococcus sp. HMSC73C01	1608901	PRJNA274553	274553	Terrabacteria group	Firmicutes	2.58177	33.7	-	LTLU01	36	2459	2370	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498898	GCA_001839345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/345/GCA_001839345.1_ASM183934v1	-	HMSC73C01
Mycobacterium tuberculosis complex sp. (ex Suricata suricatta) 48	1871905	PRJNA327952	327952	Terrabacteria group	Actinobacteria	4.3489	65.4	-	MBDE01	212	4370	4054	10/24/16	4/13/17	Scaffold	USDA Animal Plant Health Inspection Service-National Veterinary Services Laboratories	SAMN05362569	GCA_001835525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/525/GCA_001835525.1_ASM183552v1	-	48
Mycobacterium tuberculosis complex sp. (ex Procavia capensis) 50	1871907	PRJNA327952	327952	Terrabacteria group	Actinobacteria	4.35732	65.4	-	MBDG01	206	4373	4067	10/24/16	4/13/17	Scaffold	USDA Animal Plant Health Inspection Service-National Veterinary Services Laboratories	SAMN05362621	GCA_001835535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/535/GCA_001835535.1_ASM183553v1	-	50
Staphylococcus sp. HMSC74A08	1608902	PRJNA274554	274554	Terrabacteria group	Firmicutes	2.53796	33.6	-	LTLT01	35	2412	2338	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498890	GCA_001839355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/355/GCA_001839355.1_ASM183935v1	-	HMSC74A08
Clostridium sp. UBA699	1946374	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.73652	49	-	DBML01	34	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452248	GCA_002298915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/298/915/GCA_002298915.1_ASM229891v1	28894102	-
Acinetobacter sp. REDSEA-S21_B14	1811524	PRJNA289734	289734	Proteobacteria	Gammaproteobacteria	2.57711	39.1	-	LUNC01	517	-	-	4/22/16	7/27/16	Scaffold	King Abdullah University of Science and Technology	SAMN04534552	GCA_001626205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/626/205/GCA_001626205.1_ASM162620v1	27377622	-
Bacillus sp. FJAT-28004	1679165	PRJNA289421	289421	Terrabacteria group	Firmicutes	7.47986	44.3	-	LGHP01	21	6637	6440	9/10/15	4/11/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN03839969	GCA_001280845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/845/GCA_001280845.1_ASM128084v1	26494657	FJAT-28004
Streptomyces sp. NRRL S-1022	1463880	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.91515	72.3	-	JOIU01	235	8126	7567	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645515	GCA_000720135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/135/GCA_000720135.1_ASM72013v1	-	NRRL S-1022
Pseudomonas sp. NBRC 111125	1661040	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	6.34058	61.6	-	BCBB01	150	5975	5739	10/3/15	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00031660	GCA_001320295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/295/GCA_001320295.1_ASM132029v1	-	NBRC 111125
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.28837	54.7	-	LPOX01	99	5296	5052	12/21/15	3/27/17	Contig	JCVI	SAMN04252937	GCA_001472875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/875/GCA_001472875.1_SMART_857.v1	-	SMART_857
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.63842	67	-	LPHR01	223	6931	6472	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449543	GCA_001531705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/705/GCA_001531705.1_ASM153170v1	-	MSMB2112WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15506	64.1	-	FSAC01	17	5163	5021	12/14/16	3/21/17	Contig	SC	SAMEA2070547	GCA_900131285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/285/GCA_900131285.1_10665_3_75	-	245
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.80248	55.9	-	JUZL01	109	4633	4456	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197829	GCA_001057695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/695/GCA_001057695.1_ASM105769v1	26230489	629_ECLO
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.7176	31.3	-	JOUP01	47	1795	1718	11/10/15	3/18/17	Contig	FDA	SAMN02693035	GCA_001441845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/845/GCA_001441845.1_Campylobacter_coli_CVM_N26699_v1.0	-	CVM N26699
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.30011	59.9	-	FCMP01	26	5102	4928	1/21/16	3/27/17	Scaffold	SC	SAMEA2274021	GCA_001537865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/865/GCA_001537865.1_12082_5_46	-	2880STDY5682949
Lactobacillus plantarum	1590	PRJNA318575	318575	Terrabacteria group	Firmicutes	3.1246	44.5	-	LWKN01	170	3081	2773	10/7/16	3/28/17	Scaffold	IPLA-CSIC	SAMN04858425	GCA_001754025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/754/025/GCA_001754025.1_ASM175402v1	-	LL441
Corynebacterium diphtheriae	1717	PRJNA341832	341832	Terrabacteria group	Actinobacteria	2.39601	53.4	-	MION01	50	2299	2132	11/10/16	8/24/17	Scaffold	National Institute for Communicable Diseases	SAMN05729431	GCA_001876175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/175/GCA_001876175.1_ASM187617v1	28726616	ST395-KZN-2015-45784
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.78291	30.534	chromosome:CP023543.1; plasmid pCFSAN032806:CP023544.1	-	2	1877	1743	10/2/17	10/2/17	Complete Genome	US Food and Drug Administration	SAMN03580887	GCA_002407125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/407/125/GCA_002407125.1_ASM240712v1	-	CFSAN032806
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15156	41.2	-	CWEH01	87	2091	1906	6/23/15	3/26/17	Contig	SC	SAMEA1032987	GCA_001178645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/645/GCA_001178645.1_6903_7_43	-	EQUI0188
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.38048	66	-	DGLB01	83	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06456265	GCA_002387845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/845/GCA_002387845.1_ASM238784v1	28894102	-
Enterococcus faecium EnGen0314	1158646	PRJNA89015	89015	Terrabacteria group	Firmicutes	3.15255	37.9	-	AJDR01	27	3244	2984	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809203	GCA_000394635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/635/GCA_000394635.1_Ente_faec_Efm_NY1-1_V1	-	EnGen0314
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14708	52.4	-	CQOY01	79	2511	2192	3/23/15	4/10/17	Contig	SC	SAMEA1690401	GCA_001161025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/025/GCA_001161025.1_8289_2_31	-	GCGS031
Streptococcus mutans	1309	PRJNA377637	377637	Terrabacteria group	Firmicutes	2.00175	36.8	-	NBFG01	52	1995	1881	6/30/17	7/3/17	Scaffold	Peking University School of Stomatology	SAMN06464161	GCA_002212995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/995/GCA_002212995.1_ASM221299v1	-	PKUSS-7
Enterococcus faecalis EnGen0339	1169314	PRJNA157803	157803	Terrabacteria group	Firmicutes	3.26989	37.3	-	ASEE01	31	3443	3248	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00847632	GCA_000393475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/475/GCA_000393475.1_Ente_faec_TR161_V1	-	TR161
Clostridium botulinum D/C	1573941	PRJNA371745	371745	Terrabacteria group	Firmicutes	2.93054	27.9	-	MVJA01	126	2745	2590	3/3/17	3/6/17	Scaffold	Anses	SAMN06311460	GCA_002018175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/175/GCA_002018175.1_ASM201817v1	-	1276_DC
Klebsiella pneumoniae subsp. pneumoniae T69	1379689	PRJEB4362	221838	Proteobacteria	Gammaproteobacteria	5.48653	57.2	-	CBTV01	1	5453	5152	1/6/14	2/20/17	Scaffold	INSTITUT PASTEUR	SAMEA3138865	GCA_000529775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/775/GCA_000529775.1_SB4536_2858	-	T69
Vibrio parahaemolyticus S078	1394621	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.11359	45.3	-	AWKN01	467	4884	4671	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338935	GCA_000490695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/695/GCA_000490695.1_S078	-	S078
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.89024	37.9	-	MLLG01	251	1934	1638	1/9/17	3/28/17	Contig	Australian Wine Research Institute	SAMN04297020	GCA_001939345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/345/GCA_001939345.1_ASM193934v1	27118061	AWRIB133
Brucella abortus	235	PRJNA338234	338234	Proteobacteria	Alphaproteobacteria	3.25759	57.2	-	MIJH01	28	3331	3113	10/28/16	3/28/17	Contig	NCDC	SAMN05526331	GCA_001856305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/305/GCA_001856305.1_ASM185630v1	-	Br.a-1247/10-Geo
Clostridioides difficile Y215	1151381	PRJNA85937	85937	Terrabacteria group	Firmicutes	4.06857	28.2	-	AVKZ01	95	3754	3582	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766742	GCA_000451265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/265/GCA_000451265.2_ASM45126v2	-	Y215
Vibrio cholerae RC9	593589	PRJNA33553	33553	Proteobacteria	Gammaproteobacteria	4.21101	47.7	-	ACHX01	11	4132	3936	5/1/09	5/19/17	Contig	"Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR)"	SAMN02393809	GCA_000174275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/275/GCA_000174275.1_ASM17427v1	-	RC9
Bacillus thuringiensis	1428	PRJEB16800	350936	Terrabacteria group	Firmicutes	5.83272	34.7	-	FNYB01	59	6102	5717	10/29/16	4/5/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487780	GCA_900108905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/905/GCA_900108905.1_IMG-taxon_2623620454_annotated_assembly	-	DAR 81934
Burkholderia pseudomallei str. NCTC 13392 substr. morphotype_6	1343561	PRJNA177945	177945	Proteobacteria	Betaproteobacteria	7.08879	68.2	-	AUVM01	157	7414	6850	8/26/13	3/24/17	Contig	JCVI	SAMN01768103	GCA_000454585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/585/GCA_000454585.1_Final_Assembly	24201202	NCTC 13392 substr. morphotype_6
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.81246	67.1	-	MUVV01	200	7546	7118	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001984	GCA_001993985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/993/985/GCA_001993985.1_ASM199398v1	-	VC6357
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.7296	50.5	-	FTZK01	420	5334	4489	1/28/17	2/26/17	Contig	SC	SAMEA1569927	GCA_900159405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/405/GCA_900159405.1_8489_1_63	-	sh1351
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.43837	38.3	-	FJAC01	21	3165	3048	2/20/16	3/27/17	Contig	SC	SAMEA2059860	GCA_900052255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/255/GCA_900052255.1_10771_1_23	-	2531STDY5467304
Pseudomonas syringae pv. cilantro	81035	PRJNA284851	284851	Proteobacteria	Gammaproteobacteria	5.9232	58.3	-	LGLN01	102	5497	5054	9/18/15	3/26/17	Scaffold	University of Toronto	SAMN03737331	GCA_001293775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/775/GCA_001293775.1_Pci0788_9	-	0788_9
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.168	41	-	CEDO01	134	2118	1973	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233901	GCA_000941715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/715/GCA_000941715.1_Velvet_assembly	-	LS2D
Streptococcus agalactiae GB00112	1178526	PRJNA161909	161909	Terrabacteria group	Firmicutes	2.03305	35.2	-	AKXO01	56	2059	1964	8/17/12	3/15/17	Contig	MSU	SAMN01084069	GCA_000291585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/585/GCA_000291585.1_ASM29158v1	23045509	GB00112
Acinetobacter baumannii AB5711	1116236	PRJNA77025	77025	Proteobacteria	Gammaproteobacteria	4.0004	39.1	-	AHAJ01	45	3907	3681	1/6/12	3/15/17	Contig	University of Maryland School of Medicine	SAMN02436013	GCA_000241725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/725/GCA_000241725.2_ASM24172v2	22374953	AB5711
Pseudomonas aeruginosa BWHPSA010	1402510	PRJNA219871	219871	Proteobacteria	Gammaproteobacteria	6.85986	66.1	-	AXQS01	21	6642	6420	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360682	GCA_000481505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/505/GCA_000481505.1_Pseu_aeru_BWH010_V1	-	BWHPSA010
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.39764	35	-	JQQS01	299	3976	3507	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949565	GCA_001569045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/045/GCA_001569045.1_ASM156904v1	26833181	56608-V
Streptococcus pyogenes GA03805	1115824	PRJNA78631	78631	Terrabacteria group	Firmicutes	1.77965	38.3	-	AWTL01	44	1816	1689	10/25/13	3/24/17	Contig	J. Craig Venter Institute	SAMN02436404	GCA_000483625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/625/GCA_000483625.1_SpyogGA03805v1.0	-	GA03805
Neisseria meningitidis NM422	1095701	PRJNA76333	76333	Proteobacteria	Betaproteobacteria	2.29354	51.3	-	ANQY01	32	2661	2284	12/21/12	3/21/17	Contig	Institute for Genome Sciences	SAMN01055196	GCA_000328265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/265/GCA_000328265.2_ASM32826v2	-	NM422
Helicobacter pylori	210	PRJNA76567	76567	Proteobacteria	delta/epsilon subdivisions	1.61765	38.9	-	AIHW01	215	1709	1433	4/16/12	3/22/17	Contig	"Microbiology Dept, University College Cork"	SAMN02471468	GCA_000258825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/825/GCA_000258825.1_ASM25882v1	22493206	HP2RS
Streptococcus pneumoniae GA47461	760838	PRJNA48867	48867	Terrabacteria group	Firmicutes	2.04724	39.8	-	AIKZ01	7	2213	1973	3/7/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00717580	GCA_000251825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/825/GCA_000251825.2_ASM25182v2	-	GA47461
Campylobacter jejuni	197	PRJNA329382	329382	Proteobacteria	delta/epsilon subdivisions	1.70975	30.5091	chromosome:NZ_CP017229.1/CP017229.1; plasmid pFORC46.1:NZ_CP017230.1/CP017230.1; plasmid pFORC46.2:NZ_CP017231.1/CP017231.1	-	3	1791	1674	7/5/17	7/7/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN05411282	GCA_002214785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/785/GCA_002214785.1_ASM221478v1	-	FORC_046
Mycobacterium tuberculosis SUMu001	675512	PRJNA43603	43603	Terrabacteria group	Actinobacteria	4.38327	65.2	-	ADHQ01	79	4413	4051	3/2/10	3/8/17	Scaffold	Broad Institute	SAMN02595380	GCA_000152105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/105/GCA_000152105.1_ASM15210v1	-	SUMu001
Mycobacterium avium 11-0986	1392003	PRJNA216929	216929	Terrabacteria group	Actinobacteria	4.6808	68.8	-	AYNZ01	1811	4669	4173	12/9/13	1/8/14	Contig	National Animal Disease Center	SAMN02470581	GCA_000504905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/905/GCA_000504905.1_MAC_0986_version_1	-	11-0986
Bacillus cereus	1396	PRJNA277401	277401	Terrabacteria group	Firmicutes	5.15092	35.2	-	LDUP01	90	5444	5186	6/30/15	3/26/17	Contig	University of Malaya	SAMN03392518	GCA_001043655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/655/GCA_001043655.1_ASM104365v1	-	LK9
Staphylococcus epidermidis	1282	PRJNA311173	311173	Terrabacteria group	Firmicutes	2.4846	32	-	LSKW01	76	2441	2296	5/25/16	3/28/17	Contig	Nofima	SAMN04479462	GCA_001651265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/265/GCA_001651265.1_ASM165126v1	27375578	MF1789
Listeria monocytogenes	1639	PRJNA320339	320339	Terrabacteria group	Firmicutes	3.01366	37.8	-	LXRB01	83	3065	2952	6/6/16	3/1/17	Scaffold	CSIRO	SAMN04932631	GCA_001658385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/385/GCA_001658385.1_ASM165838v1	-	Lm15-011
Yersinia pestis 71021	755884	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.49341	47.7	-	ADPO01	1489	4418	3966	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403010	GCA_000323525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/525/GCA_000323525.1_ASM32352v1	23271803	71021
Campylobacter jejuni subsp. jejuni 53161	889220	PRJNA52865	52865	Proteobacteria	delta/epsilon subdivisions	1.56274	30.5	-	AION01	123	1663	1534	3/16/12	3/15/17	Contig	Cornell University	SAMN02429012	GCA_000254555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/555/GCA_000254555.2_ASM25455v2	-	53161
Campylobacter jejuni subsp. jejuni	32022	PRJNA231221	231221	Proteobacteria	delta/epsilon subdivisions	1.64147	30.5	chromosome:NZ_CP022077.1/CP022077.1	-	1	1714	1625	6/27/17	6/29/17	Complete Genome	US Food and Drug Administration 	SAMN04875589	GCA_002209025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/025/GCA_002209025.1_ASM220902v1	-	FDAARGOS_263
Staphylococcus aureus subsp. aureus WW2703/97	585161	PRJNA39243	39243	Terrabacteria group	Firmicutes	2.80475	33	-	ACSW01	36	2895	2655	12/10/09	3/2/17	Scaffold	Broad Institute	SAMN02595345	GCA_000162735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/735/GCA_000162735.1_ASM16273v1	-	WW2703/97
Staphylococcus aureus subsp. aureus M809	585157	PRJNA39525	39525	Terrabacteria group	Firmicutes	2.79836	32.9	-	ACUS01	27	2895	2713	12/10/09	3/2/17	Scaffold	Broad Institute	SAMN02595350	GCA_000162795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/795/GCA_000162795.1_ASM16279v1	-	M809
Campylobacter pinnipediorum subsp. caledonicus	1874362	PRJNA284986	284986	Proteobacteria	delta/epsilon subdivisions	1.75834	30.5	chromosome:NZ_CP017258.1/CP017258.1	-	1	1754	1671	3/6/17	7/24/17	Complete Genome	"USDA, ARS, WRRC"	SAMN03737986	GCA_002022005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/005/GCA_002022005.1_ASM202200v1	28629508	RM18021
Campylobacter jejuni subsp. jejuni LMG 9217	889249	PRJNA52923	52923	Proteobacteria	delta/epsilon subdivisions	1.65345	30.4	-	AIOO01	118	1760	1636	3/16/12	3/15/17	Contig	Cornell University	SAMN02428962	GCA_000254575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/575/GCA_000254575.2_ASM25457v2	-	LMG 9217
Yersinia pestis 710317	755885	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.44988	47.7	-	ADPP01	1119	4297	3956	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403011	GCA_000323545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/545/GCA_000323545.1_ASM32354v1	23271803	710317
Listeria monocytogenes	1639	PRJNA320339	320339	Terrabacteria group	Firmicutes	3.02054	37.8	-	LXRD01	21	3047	2978	6/6/16	3/1/17	Scaffold	CSIRO	SAMN04932633	GCA_001658415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/415/GCA_001658415.1_ASM165841v1	-	UCDL175
Staphylococcus epidermidis	1282	PRJNA319644	319644	Terrabacteria group	Firmicutes	2.54972	32	-	LYPZ01	73	2528	2385	6/6/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN05150050	GCA_001658445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/445/GCA_001658445.1_ASM165844v1	-	AOKB02
Bacillus cereus	1396	PRJNA274235	274235	Terrabacteria group	Firmicutes	5.51342	34.9	-	JYPK01	447	5915	5497	7/1/15	3/26/17	Contig	TU Muenchen	SAMN03325934	GCA_001044665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/665/GCA_001044665.1_ASM104466v1	26555390	F4430-73
Mycobacterium avium 09-5983	1392001	PRJNA216940	216940	Terrabacteria group	Actinobacteria	5.16726	68.9	-	AYNP01	1113	4959	4019	12/9/13	1/8/14	Contig	National Animal Disease Center	SAMN02470585	GCA_000504925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/925/GCA_000504925.1_MAC_5983	-	Sep-83
Mycobacterium tuberculosis '98-R604 INH-RIF-EM'	555461	PRJNA30979	30979	Terrabacteria group	Actinobacteria	4.33503	65.3	-	ABVM01	16	4301	3934	1/13/09	5/18/17	Scaffold	Broad Institute	SAMN02595232	GCA_000155795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/795/GCA_000155795.1_ASM15579v1	-	98-R604 INH-RIF-EM
Campylobacter jejuni	197	PRJNA233954	233954	Proteobacteria	delta/epsilon subdivisions	1.82152	30.5	chromosome:NZ_CP007188.1/CP007188.1	-	1	1981	1882	1/13/17	3/21/17	Complete Genome	University of Nottingham	SAMN02630630	GCA_001951235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/235/GCA_001951235.1_ASM195123v1	-	HF5-4A-4
Streptococcus pneumoniae GA47522	760840	PRJNA48871	48871	Terrabacteria group	Firmicutes	2.11038	39.6	-	AILA01	11	2290	2021	3/7/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00632917	GCA_000251845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/845/GCA_000251845.2_ASM25184v2	-	GA47522
Helicobacter pylori NCTC 11637 = CCUG 17874 = ATCC 43504	102618	PRJNA76569	76569	Proteobacteria	delta/epsilon subdivisions	1.60051	39	-	AIHX01	163	1664	1422	4/16/12	3/23/17	Contig	"Microbiology Dept, University College Cork"	SAMN02472263	GCA_000258845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/845/GCA_000258845.1_ASM25884v1	22493206	CCUG 17874
Neisseria meningitidis NMB	1172206	PRJNA158391	158391	Proteobacteria	Betaproteobacteria	2.10294	51.9	-	AKQU01	53	2416	2118	4/18/13	3/15/17	Contig	University of Western Australia	SAMN02471997	GCA_000367485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/485/GCA_000367485.1_Newbler_20120411	-	NMB
Streptococcus pyogenes SP1-LAU	1390076	PRJNA215875	215875	Terrabacteria group	Firmicutes	1.92421	38.4	-	AYPA01	152	1962	1823	11/25/13	3/27/17	Contig	Lebanese American University	SAMN02470233	GCA_000498895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/895/GCA_000498895.2_SP1-LAU	24831139	SP1-LAU
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.5631	34.9	-	JQQT01	308	4143	3662	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949527	GCA_001569065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/065/GCA_001569065.1_ASM156906v1	26833181	56608
Pseudomonas aeruginosa BWHPSA009	1402509	PRJNA219870	219870	Proteobacteria	Gammaproteobacteria	6.47014	66.2	-	AXQT01	18	6089	5923	10/24/13	3/9/17	Scaffold	Broad Institute	SAMN02360681	GCA_000481525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/525/GCA_000481525.1_Pseu_aeru_BWH009_V1	-	BWHPSA009
Acinetobacter baumannii W7282	981329	PRJNA62421	62421	Proteobacteria	Gammaproteobacteria	3.95119	39	-	AIEH01	133	3879	3561	2/21/12	3/15/17	Contig	University of Birmingham	SAMN02471607	GCA_000248275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/275/GCA_000248275.2_ASM24827v2	23259572	W7282
Streptococcus agalactiae LDS 623	1154885	PRJNA86429	86429	Terrabacteria group	Firmicutes	2.08495	35.5	-	ANEX01	129	2279	1988	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993323	GCA_000310265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/265/GCA_000310265.1_ASM31026v1	-	LDS 623
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03909	41.2	-	CEGS01	67	2021	1920	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234096	GCA_000941815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/815/GCA_000941815.1_Velvet_assembly	-	S99B
Pseudomonas syringae pv. syringae PD2774	716919	PRJNA296738	296738	Proteobacteria	Gammaproteobacteria	6.35739	59.2	-	LKEL01	180	5801	5377	12/15/15	3/27/17	Scaffold	New Zealand Institute for Plant & Food research	SAMN04102823	GCA_001466875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/875/GCA_001466875.1_ASM146687v1	27056212	PD2774
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.4887	38.3	-	FJBI01	31	3200	3053	2/20/16	3/27/17	Contig	SC	SAMEA2059852	GCA_900052265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/265/GCA_900052265.1_10771_1_11	-	2531STDY5467292
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.72497	50.5	-	FTZJ01	418	5354	4492	1/28/17	3/2/17	Contig	SC	SAMEA1569922	GCA_900159415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/415/GCA_900159415.1_8489_1_64	-	sh1352
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.92532	67.1	-	MUVY01	132	7611	7218	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001987	GCA_001994025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/025/GCA_001994025.1_ASM199402v1	-	VC7741
Burkholderia pseudomallei str. NCTC 13392 substr. morphotype_3	1343559	PRJNA177942	177942	Proteobacteria	Betaproteobacteria	6.96525	68.2	-	AUVK01	148	7283	6727	8/26/13	3/24/17	Contig	JCVI	SAMN01768106	GCA_000454605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/605/GCA_000454605.1_Final_Assembly	24201202	NCTC 13392 substr. morphotype_3
Campylobacter jejuni	197	PRJNA233954	233954	Proteobacteria	delta/epsilon subdivisions	1.64445	30.5	chromosome:NZ_CP007193.1/CP007193.1	-	1	1712	1614	1/13/17	3/21/17	Complete Genome	University of Nottingham	SAMN02630635	GCA_001951335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/335/GCA_001951335.1_ASM195133v1	-	NS4-9-1
Vibrio cholerae TMA 21	593590	PRJNA33551	33551	Proteobacteria	Gammaproteobacteria	4.02377	47.6	-	ACHY01	20	3869	3623	5/1/09	3/22/17	Contig	"Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR)"	SAMN02393808	GCA_000174295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/295/GCA_000174295.1_ASM17429v1	-	TMA 21
Clostridioides difficile CD111	1151282	PRJNA85737	85737	Terrabacteria group	Firmicutes	4.04726	28.4	-	AVHM01	240	3856	3626	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766580	GCA_000451285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/285/GCA_000451285.2_ASM45128v2	-	CD111
Brucella abortus	235	PRJNA338234	338234	Proteobacteria	Alphaproteobacteria	3.25665	57.2	-	MIJL01	29	3333	3120	10/28/16	3/28/17	Contig	NCDC	SAMN05526410	GCA_001856345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/345/GCA_001856345.1_ASM185634v1	-	Br.a-1238-10-Geo
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.83861	37.9	-	MLOQ01	150	1895	1681	1/9/17	3/28/17	Contig	Australian Wine Research Institute	SAMN04297108	GCA_001939355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/355/GCA_001939355.1_ASM193935v1	27118061	AWRIB710
Vibrio parahaemolyticus S077	1394620	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.11346	45.3	-	AWKO01	554	4891	4669	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338934	GCA_000490715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/715/GCA_000490715.1_S077	-	S077
Klebsiella pneumoniae UCI 44	1400185	PRJNA219296	219296	Proteobacteria	Gammaproteobacteria	5.83939	56.9	-	JCLX01	14	5930	5621	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02356624	GCA_000566725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/725/GCA_000566725.1_Kleb_pneu_UCI_44_V1	-	UCI 44
Clostridium botulinum D/C	1573941	PRJNA371745	371745	Terrabacteria group	Firmicutes	2.57526	28	-	MVJB01	105	2402	2266	3/3/17	3/6/17	Scaffold	Anses	SAMN06311461	GCA_002018185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/185/GCA_002018185.1_ASM201818v1	-	1277_DC
Enterococcus faecalis EnGen0327	1169246	PRJNA158739	158739	Terrabacteria group	Firmicutes	3.08627	37.5	-	ASEF01	8	3157	2999	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00839763	GCA_000393495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/495/GCA_000393495.1_Ente_faec_A-3-1_V1	-	A-3-1
Streptococcus mutans	1309	PRJNA385680	385680	Terrabacteria group	Firmicutes	1.98597	36.8	-	NFUJ01	68	2026	1833	6/8/17	6/8/17	Contig	Madurai kamaraj university	SAMN06920495	GCA_002179995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/995/GCA_002179995.1_ASM217999v1	-	B14
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.15062	52.4	-	CQOH01	76	2515	2185	3/23/15	4/10/17	Contig	SC	SAMEA1690494	GCA_001161245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/245/GCA_001161245.1_8727_8_93	-	GCGS189
Enterococcus faecium EnGen0316	1158647	PRJNA89017	89017	Terrabacteria group	Firmicutes	3.13851	38	-	AJDS01	29	3181	2965	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809204	GCA_000394655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/655/GCA_000394655.1_Ente_faec_Efm_NY1-2_V1	-	EnGen0316
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.0562	66.7	-	DGLE01	14	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453786	GCA_002387865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/865/GCA_002387865.1_ASM238786v1	28894102	-
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.1298	41.2	-	CWDS01	76	2051	1888	6/23/15	3/26/17	Contig	SC	SAMEA1032988	GCA_001178665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/665/GCA_001178665.1_6903_7_34	-	EQUI0179
Campylobacter jejuni subsp. jejuni	32022	PRJNA276739	276739	Proteobacteria	delta/epsilon subdivisions	1.65271	30.5	chromosome:NZ_CP017031.1/CP017031.1	-	1	1718	1621	9/8/16	3/20/17	Complete Genome	University of Michigan	SAMN03380191	GCA_001721945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/945/GCA_001721945.1_ASM172194v1	-	MTVDSCj07
Corynebacterium diphtheriae	1717	PRJNA341832	341832	Terrabacteria group	Actinobacteria	2.26989	53.5	-	MIYS01	78	2188	2041	11/10/16	8/24/17	Scaffold	National Institute for Communicable Diseases	SAMN05729433	GCA_001876215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/215/GCA_001876215.1_ASM187621v1	28726616	ST291-CPT-2015-46403
Lactobacillus plantarum	1590	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.1618	44.6	-	MJHH01	41	3050	2901	2/1/17	3/29/17	Scaffold	ETH Zurich	SAMN05717716	GCA_001981565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/565/GCA_001981565.1_ASM198156v1	-	RI-162
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.01045	60.2	-	FCFG01	22	4729	4572	1/21/16	3/27/17	Scaffold	SC	SAMEA2273898	GCA_001537885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/885/GCA_001537885.1_12082_2_34	-	2880STDY5682825
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.86108	31.1	-	JOUX01	118	1971	1855	11/10/15	3/18/17	Contig	FDA	SAMN02693018	GCA_001441895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/895/GCA_001441895.1_Campylobacter_coli_CVM_N5441_v1.0	-	CVM N5441
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.67458	55.1	-	JUZK01	45	4480	4339	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197830	GCA_001057735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/735/GCA_001057735.1_ASM105773v1	26230489	63_ECLO
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.02475	64.2	-	FVCK01	13	5041	4914	3/10/17	3/18/17	Contig	SC	SAMEA1967325	GCA_900131305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/305/GCA_900131305.1_10665_3_76	-	246
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.95041	66.9	-	LPHS01	179	7260	6818	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449544	GCA_001531715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/715/GCA_001531715.1_ASM153171v1	-	MSMB2114WGS
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.98311	54.9	-	LPOV01	84	4997	4767	12/21/15	3/27/17	Contig	JCVI	SAMN04252939	GCA_001472915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/915/GCA_001472915.1_SMART_887.v1	-	SMART_887
Pseudomonas sp. NBRC 111127	1661042	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	5.7852	62.5	-	BCBD01	352	5617	5164	10/3/15	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00031662	GCA_001320345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/345/GCA_001320345.1_ASM132034v1	-	NBRC 111127
Streptomyces sp. NRRL F-2747	1463843	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.726	72.3	-	JOIS01	208	7900	7513	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645513	GCA_000720145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/145/GCA_000720145.1_ASM72014v1	-	NRRL F-2747
Bacillus sp. FJAT-29937	1720553	PRJNA299747	299747	Terrabacteria group	Firmicutes	4.55132	38.3	-	LMAS01	21	4432	4280	1/8/16	4/11/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04099166	GCA_001509555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/555/GCA_001509555.1_ASM150955v1	-	FJAT-29937
Acinetobacter sp. GWC1_38_13	1797234	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	2.9654	38.6	-	MELG01	133	2907	2654	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04314124	GCA_001767535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/767/535/GCA_001767535.1_ASM176753v1	27774985	-
Clostridium sp. UBA1353	1946347	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.2783	29.9	-	DBSB01	85	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452914	GCA_002306175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/175/GCA_002306175.1_ASM230617v1	28894102	-
Staphylococcus sp. HMSC74D05	1608903	PRJNA274555	274555	Terrabacteria group	Firmicutes	2.83808	32.7	-	LTLS01	91	2988	2864	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498892	GCA_001839365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/365/GCA_001839365.1_ASM183936v1	-	HMSC74D05
Mycobacterium sp. AT1	1961706	PRJNA272922	272922	Terrabacteria group	Actinobacteria	7.07238	67.2	-	MVOC01	129	6789	6561	3/20/17	3/22/17	Scaffold	University of East Anglia	SAMN06349362	GCA_002043095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/095/GCA_002043095.1_ASM204309v1	-	AT1
Mycobacterium sp. CECT 8766	2015071	PRJNA391446	391446	Terrabacteria group	Actinobacteria	5.37639	66.8	-	NKCO01	58	5150	5006	8/10/17	8/12/17	Scaffold	Northumbria University	SAMN07269033	GCA_002245615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/615/GCA_002245615.1_ASM224561v1	-	CECT 8766
Staphylococcus sp. HMSC74F04	1608904	PRJNA274556	274556	Terrabacteria group	Firmicutes	2.87573	32.7	-	LTLR01	147	3044	2856	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498899	GCA_001839405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/405/GCA_001839405.1_ASM183940v1	-	HMSC74F04
Clostridium sp. UBA1056	1946346	PRJNA348753	348753	Terrabacteria group	Firmicutes	4.05333	29.8	-	DCDL01	66	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06454910	GCA_002316385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/385/GCA_002316385.1_ASM231638v1	28894102	-
Acinetobacter sp. RIFCSPHIGHO2_12_41_5	1797235	PRJNA288027	288027	Proteobacteria	Gammaproteobacteria	2.59745	41	-	MELH01	1060	2948	2067	10/18/16	10/19/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN04313765	GCA_001768625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/768/625/GCA_001768625.1_ASM176862v1	27774985	-
Bacillus sp. FJAT-27445	1679166	PRJNA299754	299754	Terrabacteria group	Firmicutes	4.58806	44	-	LMTI01	14	4554	4414	1/11/16	4/11/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04102801	GCA_001510665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/665/GCA_001510665.1_ASM151066v1	-	FJAT-27445
Streptomyces sp. NRRL S-337	1463900	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.05958	71.5	-	JOIX01	228	8129	7558	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645518	GCA_000720175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/175/GCA_000720175.1_ASM72017v1	-	NRRL S-337
Pseudomonas sp. NBRC 111128	1661043	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	5.74685	62.2	-	BCBE01	197	5537	5277	10/3/15	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00031663	GCA_001320385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/385/GCA_001320385.1_ASM132038v1	-	NBRC 111128
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.03497	55.2	-	LPOR01	70	4906	4679	12/21/15	3/27/17	Contig	JCVI	SAMN04252943	GCA_001472975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/472/975/GCA_001472975.1_SMART_935.v1	-	SMART_935
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.27996	67.4	-	LPHU01	152	6604	6236	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449546	GCA_001531745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/745/GCA_001531745.1_ASM153174v1	-	MSMB2116WGS
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.06865	64.2	-	FVDR01	17	5077	4919	3/10/17	3/18/17	Contig	SC	SAMEA1964382	GCA_900131315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/315/GCA_900131315.1_10665_3_77	-	247
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.91816	54.9	-	JUTR01	175	4754	4551	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197979	GCA_001058415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/415/GCA_001058415.1_ASM105841v1	26230489	77_ECLO
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.85658	31	-	JOUV01	156	1967	1829	11/10/15	3/18/17	Contig	FDA	SAMN02693036	GCA_001441905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/905/GCA_001441905.1_Campylobacter_coli_CVM_N4677_v1.0	-	CVM N4677
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.05631	60.1	-	FCME01	18	4793	4641	1/21/16	3/27/17	Scaffold	SC	SAMEA2273949	GCA_001537905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/905/GCA_001537905.1_12082_5_34	-	2880STDY5682876
Lactobacillus plantarum	1590	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.29694	44.3	-	MJHI01	101	3208	3001	2/1/17	3/29/17	Scaffold	ETH Zurich	SAMN05717717	GCA_001981575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/575/GCA_001981575.1_ASM198157v1	-	RI-165
Corynebacterium diphtheriae	1717	PRJNA341832	341832	Terrabacteria group	Actinobacteria	2.20358	53.6	-	MIYP01	134	2151	1970	11/10/16	8/24/17	Scaffold	National Institute for Communicable Diseases	SAMN05729429	GCA_001876245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/245/GCA_001876245.1_ASM187624v1	28726616	ST378-KZN-2015-45902
Campylobacter jejuni subsp. jejuni	32022	PRJNA276739	276739	Proteobacteria	delta/epsilon subdivisions	1.68441	30.5	chromosome:NZ_CP017032.1/CP017032.1	-	1	1754	1632	9/8/16	3/20/17	Complete Genome	University of Michigan	SAMN03380192	GCA_001721965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/965/GCA_001721965.1_ASM172196v1	-	MTVDSCj13
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15725	41.2	-	CVXR01	101	2081	1906	6/24/15	3/26/17	Contig	SC	SAMEA1032989	GCA_001178685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/685/GCA_001178685.1_6817_2_82	-	EQUI0035
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.30015	66.9	-	DGLY01	256	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451500	GCA_002388155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/388/155/GCA_002388155.1_ASM238815v1	28894102	-
Enterococcus faecium EnGen0318	1158648	PRJNA89019	89019	Terrabacteria group	Firmicutes	3.14655	37.9	-	AJDT01	23	3217	2974	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809205	GCA_000394675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/675/GCA_000394675.1_Ente_faec_Efm_NY1-3_V1	-	EnGen0318
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14902	52.4	-	CQOL01	68	2531	2194	3/23/15	4/18/17	Contig	SC	SAMEA1690479	GCA_001161645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/645/GCA_001161645.1_8727_8_57	-	GCGS153
Enterococcus faecalis EnGen0331	1169250	PRJNA158741	158741	Terrabacteria group	Firmicutes	3.04414	37.3	-	ASEG01	27	3130	2972	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00839764	GCA_000393515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/515/GCA_000393515.1_Ente_faec_Merz89_V1	-	Merz89
Clostridium botulinum	1491	PRJNA293156	293156	Terrabacteria group	Firmicutes	3.89706	28	-	LIIV01	22	3758	3562	3/9/17	3/11/17	Scaffold	Institut Pasteur	SAMN03998139	GCA_002024385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/385/GCA_002024385.1_ASM202438v1	-	1141-11
Klebsiella pneumoniae UCI 43	1400184	PRJNA219295	219295	Proteobacteria	Gammaproteobacteria	5.84877	56.9	-	JCLY01	8	5943	5638	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02356623	GCA_000566745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/745/GCA_000566745.1_Kleb_pneu_UCI_43_V1	-	UCI 43
Vibrio parahaemolyticus S076	1394619	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.11224	45.3	-	AWKP01	449	4873	4663	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338933	GCA_000490735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/735/GCA_000490735.1_S076	-	S076
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.075	38.1	-	MLOO01	424	2095	1837	1/9/17	3/28/17	Contig	Australian Wine Research Institute	SAMN04297106	GCA_001939365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/365/GCA_001939365.1_ASM193936v1	27118061	AWRIB706
Brucella abortus	235	PRJNA305302	305302	Proteobacteria	Alphaproteobacteria	3.23472	57.3	-	LODQ01	243	3396	3095	1/9/17	3/28/17	Contig	CORPOICA	SAMN04323936	GCA_001940595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/595/GCA_001940595.1_ASM194059v1	-	Col-B012
Clostridioides difficile CD113	1151283	PRJNA85739	85739	Terrabacteria group	Firmicutes	4.25565	28.8	-	AVHN01	127	3981	3813	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766581	GCA_000451305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/305/GCA_000451305.2_ASM45130v2	-	CD113
Vibrio cholerae BX 330286	593587	PRJNA33559	33559	Proteobacteria	Gammaproteobacteria	4.00067	47.5	-	ACIA01	8	3850	3652	5/1/09	3/22/17	Contig	"Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR)"	SAMN02393811	GCA_000174335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/335/GCA_000174335.1_ASM17433v1	-	BX 330286
Campylobacter jejuni subsp. jejuni	32022	PRJNA305292	305292	Proteobacteria	delta/epsilon subdivisions	1.67511	30.5	chromosome:NZ_CP015209.1/CP015209.1	-	1	1751	1641	7/16/16	3/20/17	Complete Genome	USDA ARS	SAMN04323384	GCA_001686905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/686/905/GCA_001686905.1_ASM168690v1	-	RM1285
Burkholderia pseudomallei str. NCTC 13392 substr. morphotype_2	1343558	PRJNA177941	177941	Proteobacteria	Betaproteobacteria	7.00358	68.2	-	AUVJ01	248	7362	6758	8/26/13	3/24/17	Contig	JCVI	SAMN01768105	GCA_000454625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/625/GCA_000454625.1_Final_Assembly	24201202	NCTC 13392 substr. morphotype_2
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.9407	67.1	-	MUVW01	164	7622	7230	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001985	GCA_001994035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/035/GCA_001994035.1_ASM199403v1	-	VC6590
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.73362	50.5	-	FTZO01	416	5340	4499	1/28/17	2/26/17	Contig	SC	SAMEA1569789	GCA_900159465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/465/GCA_900159465.1_8489_1_69	-	sh1357
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.57679	38.3	-	FJDA01	34	3280	3127	2/20/16	3/27/17	Contig	SC	SAMEA2058477	GCA_900052275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/275/GCA_900052275.1_10060_4_88	-	2531STDY5467369
Pseudomonas syringae ICMP 13102	1198303	PRJNA296735	296735	Proteobacteria	Gammaproteobacteria	5.95475	59.3	-	LKEO01	158	5357	5025	12/15/15	3/27/17	Scaffold	New Zealand Institute for Plant & Food research	SAMN04102820	GCA_001466945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/945/GCA_001466945.1_ASM146694v1	27056212	ICMP 13102
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.12415	41.1	-	CEFB01	132	2161	2012	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233933	GCA_000941875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/875/GCA_000941875.1_Velvet_assembly	-	LS6G
Streptococcus agalactiae FSL C1-487	1154771	PRJNA86131	86131	Terrabacteria group	Firmicutes	2.23437	35.5	-	ANCK01	124	2308	2146	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993351	GCA_000310285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/285/GCA_000310285.1_ASM31028v1	-	FSL C1-487
Acinetobacter baumannii Naval-17	903896	PRJNA53391	53391	Proteobacteria	Gammaproteobacteria	4.00996	39.0937	plasmid pNaval17-13:NZ_AFDO01000021.1/AFDO01000021.1	AFDO01	21	3917	3722	7/16/12	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN02436551	GCA_000278605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/605/GCA_000278605.1_gacin08v1.0	-	Naval-17
Pseudomonas aeruginosa BWHPSA008	1402508	PRJNA219869	219869	Proteobacteria	Gammaproteobacteria	6.5245	66.1	-	AXQU01	5	6186	6018	10/24/13	3/16/17	Scaffold	Broad Institute	SAMN02360680	GCA_000481545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/545/GCA_000481545.1_Pseu_aeru_BWH008_V1	-	BWHPSA008
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.74336	35	-	JQQU01	300	4339	3921	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949529	GCA_001569075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/075/GCA_001569075.1_ASM156907v1	26833181	56609
Streptococcus pyogenes GA03747	1115828	PRJNA78639	78639	Terrabacteria group	Firmicutes	1.85771	38.4	-	AWUB01	52	1907	1764	11/25/13	3/24/17	Contig	J. Craig Venter Institute	SAMN02436402	GCA_000499145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/145/GCA_000499145.1_SpyogGA03747v1.0	-	GA03747
Neisseria meningitidis NM115	1145183	PRJNA83579	83579	Proteobacteria	Betaproteobacteria	2.16704	51.9	-	APUR01	144	2492	2093	5/1/13	3/21/17	Contig	IGS	SAMN01780134	GCA_000386025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/025/GCA_000386025.2_ASM38602v2	-	NM115
Helicobacter pylori Hp H-41	992046	PRJNA64119	64119	Proteobacteria	delta/epsilon subdivisions	1.66057	39.2	-	AKOM01	11	1636	1472	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778907	GCA_000273805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/805/GCA_000273805.1_ASM27380v1	23661595	Hp H-41
Streptococcus pneumoniae GA47597	760842	PRJNA48875	48875	Terrabacteria group	Firmicutes	2.07342	39.7	-	AILB01	10	2295	2017	3/7/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00668054	GCA_000251865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/865/GCA_000251865.2_ASM25186v2	-	GA47597
Campylobacter jejuni	197	PRJNA295067	295067	Proteobacteria	delta/epsilon subdivisions	1.6358	30.5	chromosome:NZ_CP012696.1/CP012696.1	-	1	1708	1608	10/14/15	3/18/17	Complete Genome	USDA-Agricultural Research Service-Eastern Regional Research Center	SAMN04054191	GCA_001314285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/314/285/GCA_001314285.1_ASM131428v1	26607886	RM1285
Mycobacterium tuberculosis CPHL_A	611303	PRJNA34553	34553	Terrabacteria group	Actinobacteria	4.42034	65.2	-	ACHP01	6	4345	3996	3/31/09	8/8/17	Scaffold	Broad Institute	SAMN02595306	GCA_000159755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/755/GCA_000159755.1_ASM15975v1	-	CPHL_A
Mycobacterium avium 10-5560	1391999	PRJNA216938	216938	Terrabacteria group	Actinobacteria	4.84342	68.7	-	AYNS01	1819	4877	4414	12/9/13	1/8/14	Contig	National Animal Disease Center	SAMN02470588	GCA_000512435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/435/GCA_000512435.1_MAC_5560_version_1	-	Oct-60
Bacillus cereus	1396	PRJNA274235	274235	Terrabacteria group	Firmicutes	6.22608	35	-	LABL01	60	6592	6070	7/1/15	3/26/17	Contig	TU Muenchen	SAMN03325940	GCA_001044815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/815/GCA_001044815.1_ASM104481v1	26555390	MHI 226
Staphylococcus epidermidis	1282	PRJNA319644	319644	Terrabacteria group	Firmicutes	2.46379	32.1	-	LYPY01	51	2450	2317	6/6/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN05150049	GCA_001658455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/455/GCA_001658455.1_ASM165845v1	-	Bt1p3
Listeria monocytogenes	1639	PRJNA335730	335730	Terrabacteria group	Firmicutes	3.04078	37.9	-	MCHJ01	21	3084	2994	4/21/17	4/24/17	Scaffold	Iowa State University	SAMN05452976	GCA_002103235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/235/GCA_002103235.1_ASM210323v1	-	L58-55
Yersinia pestis 7338	755886	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.34451	47.5	-	ADPQ01	1074	4247	3869	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403012	GCA_000323565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/565/GCA_000323565.1_ASM32356v1	23271803	7338
Campylobacter jejuni subsp. jejuni 2008-1025	889250	PRJNA52925	52925	Proteobacteria	delta/epsilon subdivisions	1.66104	30.4	-	AIOP01	139	1753	1660	3/16/12	3/15/17	Contig	Cornell University	SAMN02429046	GCA_000254595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/595/GCA_000254595.2_ASM25459v2	-	2008-1025
Campylobacter jejuni subsp. jejuni	32022	PRJNA266760	266760	Proteobacteria	delta/epsilon subdivisions	1.67078	30.5	chromosome:NZ_CP010307.1/CP010307.1	-	1	1753	1662	2/10/15	3/16/17	Complete Genome	Public Health Agency of Canada	SAMN03216761	GCA_000835305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/835/305/GCA_000835305.1_ASM83530v1	-	00-6200
Staphylococcus aureus subsp. aureus 58-424	585144	PRJNA39527	39527	Terrabacteria group	Firmicutes	2.82837	32.9	-	ACUT01	23	2971	2732	12/15/09	3/2/17	Scaffold	Broad Institute	SAMN02595351	GCA_000162815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/815/GCA_000162815.1_ASM16281v1	-	58-424
Staphylococcus aureus subsp. aureus Btn1260	585148	PRJNA39529	39529	Terrabacteria group	Firmicutes	2.79925	32.8	-	ACUU01	17	2913	2710	12/15/09	3/2/17	Scaffold	Broad Institute	SAMN02595352	GCA_000162835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/835/GCA_000162835.1_ASM16283v1	-	Btn1260
Campylobacter jejuni subsp. jejuni	32022	PRJNA268925	268925	Proteobacteria	delta/epsilon subdivisions	1.71236	30.5	chromosome:NZ_CP010058.1/CP010058.1	-	1	1817	1635	12/23/14	4/17/17	Complete Genome	USDA	SAMN03246887	GCA_000807355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/355/GCA_000807355.1_ASM80735v1	25657275	YH001
Campylobacter jejuni subsp. jejuni 2008-894	889251	PRJNA52927	52927	Proteobacteria	delta/epsilon subdivisions	1.62793	30.4	-	AIOQ01	116	1706	1578	3/16/12	3/15/17	Contig	Cornell University	SAMN02429047	GCA_000254615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/615/GCA_000254615.2_ASM25461v2	-	2008-894
Yersinia pestis 735	755868	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.42371	47.4	-	ADPR01	882	4247	3946	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403013	GCA_000323585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/585/GCA_000323585.1_ASM32358v1	23271803	735
Listeria monocytogenes	1639	PRJNA335730	335730	Terrabacteria group	Firmicutes	3.05234	37.9	-	MCHI01	28	3102	3017	4/21/17	4/24/17	Scaffold	Iowa State University	SAMN05452962	GCA_002103245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/245/GCA_002103245.1_ASM210324v1	-	ABS6
Staphylococcus epidermidis	1282	PRJNA319645	319645	Terrabacteria group	Firmicutes	2.45618	32.1	-	LYQD01	49	2456	2314	6/6/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN05173253	GCA_001658465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/465/GCA_001658465.1_ASM165846v1	-	AHKF08
Bacillus cereus	1396	PRJNA267549	267549	Terrabacteria group	Firmicutes	5.36003	35.2	-	JUOI01	504	5781	5385	7/10/15	3/26/17	Contig	University of Washington	SAMN03198118	GCA_001059875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/875/GCA_001059875.1_ASM105987v1	26230489	910_BCER
Mycobacterium avium subsp. avium 2285 (R)	1299330	PRJNA191794	191794	Terrabacteria group	Actinobacteria	5.36372	69	-	JAOE01	4	6157	6108	1/27/14	2/22/14	Contig	Institute for Genome Sciences	SAMN02641610	GCA_000523675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/675/GCA_000523675.1_ASM52367v1	-	2285 (R)
Mycobacterium tuberculosis SUMu002	675513	PRJNA43605	43605	Terrabacteria group	Actinobacteria	4.40123	65	-	ADHR01	40	4396	3996	3/2/10	5/18/17	Scaffold	Broad Institute	SAMN02595381	GCA_000165695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/165/695/GCA_000165695.1_ASM16569v1	-	SUMu002
Campylobacter jejuni subsp. jejuni F38011	1408176	PRJNA222831	222831	Proteobacteria	delta/epsilon subdivisions	1.69194	30.5	chromosome:NZ_CP006851.1/CP006851.1	-	1	1775	1654	11/5/14	3/16/17	Complete Genome	Washington State University	SAMN02376799	GCA_000772225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/225/GCA_000772225.1_ASM77222v1	-	F38011
Streptococcus pneumoniae GA47628	760843	PRJNA48877	48877	Terrabacteria group	Firmicutes	2.12027	39.8	-	AILC01	12	2317	2041	3/7/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00718795	GCA_000251885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/885/GCA_000251885.2_ASM25188v2	-	GA47628
Helicobacter pylori Hp A-8	992053	PRJNA64133	64133	Proteobacteria	delta/epsilon subdivisions	1.64063	39.2	-	AKOS01	7	1610	1456	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778858	GCA_000273825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/825/GCA_000273825.1_ASM27382v1	23661595	Hp A-8
Neisseria meningitidis NM90	1145184	PRJNA83581	83581	Proteobacteria	Betaproteobacteria	2.25503	51.8	-	APUS01	144	2624	2184	5/1/13	3/21/17	Contig	IGS	SAMN01780135	GCA_000386045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/045/GCA_000386045.2_ASM38604v2	-	NM90
Streptococcus pyogenes GA16797	1115830	PRJNA78643	78643	Terrabacteria group	Firmicutes	1.75004	38.4	-	AWUD01	44	1739	1605	11/25/13	3/24/17	Contig	J. Craig Venter Institute	SAMN02436566	GCA_000499165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/165/GCA_000499165.1_SpyogGA16797v1.0	-	GA16797
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.70612	35	-	JQQV01	401	4289	3897	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949566	GCA_001569105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/105/GCA_001569105.1_ASM156910v1	26833181	56609-V
Pseudomonas aeruginosa BWHPSA007	1402507	PRJNA219868	219868	Proteobacteria	Gammaproteobacteria	6.82705	66	-	AXQV01	6	6499	6317	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360679	GCA_000481565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/565/GCA_000481565.1_Pseu_aeru_BWH007_V1	-	BWHPSA007
Acinetobacter baumannii OIFC137	903889	PRJNA53377	53377	Proteobacteria	Gammaproteobacteria	4.08142	39.001	plasmid pOIFC137-122:NZ_AFDK01000004.1/AFDK01000004.1	AFDK01	4	3954	3781	7/16/12	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN02436470	GCA_000278625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/625/GCA_000278625.1_AcbauOIFC137v1.0	-	OIFC137
Streptococcus agalactiae STIR-CD-14	1154848	PRJNA86355	86355	Terrabacteria group	Firmicutes	2.06423	35.2	-	ANEJ01	25	2142	2027	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993722	GCA_000310305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/305/GCA_000310305.1_ASM31030v1	-	STIR-CD-14
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.16252	41.5	-	CEEV01	114	2168	2036	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233899	GCA_000942015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/015/GCA_000942015.1_Velvet_assembly	-	LS1Y
Pseudomonas syringae ICMP 19499	1208101	PRJNA295867	295867	Proteobacteria	Gammaproteobacteria	6.16231	58.3	-	LKCI01	102	5679	5357	12/15/15	3/27/17	Scaffold	New Zealand Institute for Plant & Food research	SAMN04092560	GCA_001467115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/115/GCA_001467115.1_ASM146711v1	27056212	ICMP 19499
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.41391	38.3	-	FJFU01	22	3124	3013	2/20/16	3/27/17	Contig	SC	SAMEA2077540	GCA_900052285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/285/GCA_900052285.1_10625_2_58	-	2532STDY5467531
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.74404	50.5	-	FUAD01	423	5344	4491	1/28/17	2/26/17	Contig	SC	SAMEA1569744	GCA_900159635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/635/GCA_900159635.1_8489_1_88	-	sh1376
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.86782	67.1	-	MUWA01	122	7564	7172	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001989	GCA_001994075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/075/GCA_001994075.1_ASM199407v1	-	VC7932
Burkholderia pseudomallei str. NCTC 13392 substr. morphotype_5	1343560	PRJNA177944	177944	Proteobacteria	Betaproteobacteria	7.02672	68.2	-	AUVL01	153	7352	6787	8/26/13	3/24/17	Contig	JCVI	SAMN01768104	GCA_000454645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/645/GCA_000454645.1_Final_Assembly	24201202	NCTC 13392 substr. morphotype_5
Bacillus thuringiensis serovar sotto str. T04001	527026	PRJNA29715	29715	Terrabacteria group	Firmicutes	6.10775	34.6996	chromosome:CM000749.1	ACNB01	1	13217	13166	4/30/09	11/19/13	Chromosome	Naval Medical Research Center	SAMN00727716	GCA_000161535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/535/GCA_000161535.1_ASM16153v1	22645259	T04001
Vibrio cholerae CIRS101	661513	PRJNA39603	39603	Proteobacteria	Gammaproteobacteria	4.05969	47.5	-	ACVW01	18	3880	3654	8/11/09	3/22/17	Contig	"Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR)"	SAMN02393814	GCA_000175695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/695/GCA_000175695.1_ASM17569v1	-	CIRS 101
Clostridioides difficile CD127	1151284	PRJNA85741	85741	Terrabacteria group	Firmicutes	3.72766	28.7	-	AVHO01	985	3578	3353	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766582	GCA_000451325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/325/GCA_000451325.2_ASM45132v2	-	CD127
Brucella abortus	235	PRJNA243997	243997	Proteobacteria	Alphaproteobacteria	3.44426	57.2093	chromosome 1:CP009098.1; chromosome 2:CP009099.1	-	2	3255	3160	9/16/14	10/30/14	Chromosome	University of Pretoria	SAMN02721312	GCA_000755125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/125/GCA_000755125.1_ASM75512v1	-	ZW053
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.90143	38.1	-	MLMD01	230	1930	1718	1/9/17	3/28/17	Contig	Australian Wine Research Institute	SAMN04297043	GCA_001939375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/375/GCA_001939375.1_ASM193937v1	27118061	AWRIB328
Vibrio parahaemolyticus S075	1394618	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.11421	45.3	-	AWKQ01	721	4902	4647	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338932	GCA_000490755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/755/GCA_000490755.1_S075	-	S075
Klebsiella pneumoniae UCI 42	1400183	PRJNA219294	219294	Proteobacteria	Gammaproteobacteria	5.49127	57.1	-	JCLZ01	4	5450	5198	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02356622	GCA_000566765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/765/GCA_000566765.1_Kleb_pneu_UCI_42_V1	-	UCI 42
Clostridium botulinum	1491	PRJNA293095	293095	Terrabacteria group	Firmicutes	3.79832	28.1	-	LIIS01	43	3669	3453	3/9/17	3/11/17	Scaffold	Institut Pasteur	SAMN03996919	GCA_002024445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/445/GCA_002024445.1_ASM202444v1	-	126-07
Enterococcus faecalis EnGen0329	1169248	PRJNA158743	158743	Terrabacteria group	Firmicutes	3.04724	37.4	-	ASEH01	17	3126	2975	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00839765	GCA_000393535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/535/GCA_000393535.1_Ente_faec_Merz192_V1	-	Merz192
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.1484	52.4	-	CQLB01	76	2515	2186	3/22/15	4/10/17	Contig	SC	SAMEA1677491	GCA_001161785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/785/GCA_001161785.1_8727_5_56	-	GCGS206
Enterococcus faecium EnGen0319	1158649	PRJNA89021	89021	Terrabacteria group	Firmicutes	3.15969	38.1	-	AJDU01	28	3197	2949	5/3/13	4/10/17	Scaffold	Broad Institute	SAMN00809206	GCA_000394695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/695/GCA_000394695.1_Ente_faec_Efm_NY1-4_V1	-	EnGen0319
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.70783	66.1	-	DGQY01	28	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451893	GCA_002389805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/805/GCA_002389805.1_ASM238980v1	28894102	-
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.08674	41.2	-	CWES01	77	1993	1824	6/24/15	3/26/17	Contig	SC	SAMEA1032990	GCA_001178705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/705/GCA_001178705.1_6903_8_57	-	EQUI0202
Campylobacter jejuni subsp. jejuni	32022	PRJNA252963	252963	Proteobacteria	delta/epsilon subdivisions	1.65174	30.5	chromosome:NZ_CP008787.1/CP008787.1	-	1	1720	1621	8/1/14	3/16/17	Complete Genome	University of Michigan	SAMN02864993	GCA_000737085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/085/GCA_000737085.1_ASM73708v1	25146148	MTVDSCj20
Corynebacterium diphtheriae	1717	PRJNA341832	341832	Terrabacteria group	Actinobacteria	2.36943	53.4	-	MIOO01	50	2274	2105	11/10/16	8/24/17	Scaffold	National Institute for Communicable Diseases	SAMN05729434	GCA_001876255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/255/GCA_001876255.1_ASM187625v1	28726616	ST395-SA-1980-6853
Lactobacillus plantarum	1590	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.21836	44.4	-	MJHD01	101	3172	2878	2/1/17	3/29/17	Scaffold	ETH Zurich	SAMN05717711	GCA_001981595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/595/GCA_001981595.1_ASM198159v1	-	RI-012
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.36845	59.7	-	FCLS01	17	5090	4928	1/21/16	3/27/17	Scaffold	SC	SAMEA2274067	GCA_001537925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/537/925/GCA_001537925.1_12082_3_89	-	2880STDY5682995
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.6364	31.4	-	JOUU01	43	1693	1617	11/10/15	3/18/17	Contig	FDA	SAMN02693015	GCA_001441915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/915/GCA_001441915.1_Campylobacter_coli_CVM_N462_v1.0	-	CVM N462
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.98724	54.8	-	JUQP01	160	4842	4627	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198059	GCA_001058605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/605/GCA_001058605.1_ASM105860v1	26230489	85_ECLO
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21151	64.1	-	FWDE01	10	5329	5153	3/16/17	3/24/17	Contig	SC	SAMEA2068677	GCA_900131325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/325/GCA_900131325.1_10665_3_79	-	249
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.99905	67.4	-	LPHT01	108	6327	5979	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449545	GCA_001531755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/755/GCA_001531755.1_ASM153175v1	-	MSMB2115WGS
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.32288	54.7	-	LPOQ01	132	5301	5018	12/21/15	3/27/17	Contig	JCVI	SAMN04252944	GCA_001473015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/015/GCA_001473015.1_SMART_1001.v1	-	SMART_1001
Pseudomonas sp. NBRC 111129	1661044	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	5.6881	62.1	-	BCBF01	233	5441	5179	10/3/15	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00031664	GCA_001320435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/435/GCA_001320435.1_ASM132043v1	-	NBRC 111129
Streptomyces sp. NRRL S-340	1463901	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.64137	72.8	-	JOIY01	162	7632	7135	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645519	GCA_000720185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/185/GCA_000720185.1_ASM72018v1	-	NRRL S-340
Bacillus sp. FJAT-29814	1729688	PRJNA299751	299751	Terrabacteria group	Firmicutes	5.88844	42.1	-	LMTJ01	22	5790	5596	1/11/16	4/11/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04102798	GCA_001510715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/715/GCA_001510715.1_ASM151071v1	-	FJAT-29814
Acinetobacter sp. 38-8	1895694	PRJNA279279	279279	Proteobacteria	Gammaproteobacteria	3.47817	36.9	-	MKSP01	358	3469	2421	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660532	GCA_001897345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/345/GCA_001897345.1_ASM189734v1	-	-
Clostridium sp. UBA1652	1946348	PRJNA348753	348753	Terrabacteria group	Firmicutes	4.74057	30	-	DCLI01	102	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06453961	GCA_002320975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/975/GCA_002320975.1_ASM232097v1	28894102	-
Staphylococcus sp. HMSC74F12	1608905	PRJNA274557	274557	Terrabacteria group	Firmicutes	2.55533	33.7	-	LTLQ01	29	2423	2333	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498901	GCA_001839425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/425/GCA_001839425.1_ASM183942v1	-	HMSC74F12
Mycobacterium sp. UNC267MFSha1.1M11	1502745	PRJEB15887	347957	Terrabacteria group	Actinobacteria	6.57226	67	-	FMUB01	29	6368	6209	10/17/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02799620	GCA_900100615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/615/GCA_900100615.1_IMG-taxon_2593339259_annotated_assembly	-	UNC267MFSha1.1M11
Mycobacterium sp. 365mftsu	1761811	PRJEB15733	347683	Terrabacteria group	Actinobacteria	5.56656	66.6	-	FMZG01	14	5349	5226	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488581	GCA_900101555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/555/GCA_900101555.1_IMG-taxon_2639762559_annotated_assembly	-	365MFTsu
Staphylococcus sp. HMSC74G01	1608906	PRJNA274558	274558	Terrabacteria group	Firmicutes	2.78472	32.7	-	LTLP01	83	2866	2690	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498900	GCA_001839435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/435/GCA_001839435.1_ASM183943v1	-	HMSC74G01
Clostridium sp. UBA2060	1946350	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.47507	29.9	-	DDAK01	163	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457245	GCA_002332585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/585/GCA_002332585.1_ASM233258v1	28894102	-
Acinetobacter sp. 39-4	1895695	PRJNA279279	279279	Proteobacteria	Gammaproteobacteria	3.34472	37.1	-	MKRP01	1543	3576	2110	12/9/16	12/9/16	Scaffold	"Banfield Lab, University of California, Berkeley"	SAMN05660506	GCA_001897925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/897/925/GCA_001897925.1_ASM189792v1	-	-
Bacillus sp. FJAT-28573	1720554	PRJNA299748	299748	Terrabacteria group	Firmicutes	5.3211	37.4	-	LMXG01	21	5105	4806	1/26/16	4/11/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04099167	GCA_001541085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/085/GCA_001541085.1_ASM154108v1	-	FJAT-28573
Streptomyces sp. NRRL S-475	1463910	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.5405	71.5	-	JOJB01	155	7660	7271	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645522	GCA_000720215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/215/GCA_000720215.1_ASM72021v1	-	NRRL S-475
Pseudomonas sp. NBRC 111130	1661045	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	5.71874	62.8	-	BCBG01	118	5360	5158	10/3/15	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00031665	GCA_001320485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/485/GCA_001320485.1_ASM132048v1	-	NBRC 111130
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.01663	55.1	-	LPOP01	46	4935	4740	12/21/15	3/27/17	Contig	JCVI	SAMN04252945	GCA_001473025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/025/GCA_001473025.1_SMART_1009.v1	-	SMART_1009
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.97964	67.1	-	LPHW01	377	7323	6742	1/22/16	6/27/17	Contig	Northern Arizona University	SAMN03449548	GCA_001531785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/785/GCA_001531785.1_ASM153178v1	-	MSMB2119WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.25224	64.1	-	FSAF01	26	5351	5172	12/14/16	3/21/17	Contig	SC	SAMEA2071354	GCA_900131335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/335/GCA_900131335.1_10665_3_80	-	250
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.76947	53.5	-	JUZJ01	138	4697	4453	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197831	GCA_001077015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/015/GCA_001077015.1_ASM107701v1	26230489	630_ECLO
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.93528	30.9	-	JOVB01	162	2043	1900	11/10/15	3/18/17	Contig	FDA	SAMN02693041	GCA_001441955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/955/GCA_001441955.1_Campylobacter_coli_CVM_N8133_v1.0	-	CVM N8133
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.16539	59.9	-	FCJZ01	18	4955	4797	1/21/16	3/27/17	Scaffold	SC	SAMEA2274019	GCA_001538005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/005/GCA_001538005.1_12082_3_46	-	2880STDY5682947
Lactobacillus plantarum	1590	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.0984	44.5	-	MJHK01	58	2995	2823	2/1/17	3/29/17	Scaffold	ETH Zurich	SAMN05717719	GCA_001981655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/655/GCA_001981655.1_ASM198165v1	-	RI-190
Corynebacterium diphtheriae	1717	PRJNA341832	341832	Terrabacteria group	Actinobacteria	2.41268	53.7	-	MIOP01	48	2313	2138	11/10/16	8/24/17	Scaffold	National Institute for Communicable Diseases	SAMN05729435	GCA_001876285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/285/GCA_001876285.1_ASM187628v1	28726616	ST402-SA-1980-2337
Campylobacter jejuni subsp. jejuni CG8421	478547	PRJNA21037	21037	Proteobacteria	delta/epsilon subdivisions	1.63603	30.5	chromosome:NZ_CP005388.1/CP005388.1	-	1	1724	1588	5/1/14	3/16/17	Complete Genome	Naval Medical Research Center	SAMN02470701	GCA_000171795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/795/GCA_000171795.2_ASM17179v2	18809665	CG8421
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15044	41.2	-	CWEA01	86	2079	1910	6/23/15	3/26/17	Contig	SC	SAMEA1032991	GCA_001178725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/725/GCA_001178725.1_6903_7_35	-	EQUI0180
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.42202	66.5	-	DGRH01	70	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450363	GCA_002389885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/885/GCA_002389885.1_ASM238988v1	28894102	-
Enterococcus faecium EnGen0321	1158650	PRJNA89023	89023	Terrabacteria group	Firmicutes	3.18499	38	-	AJDV01	27	3242	3001	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809207	GCA_000394715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/715/GCA_000394715.1_Ente_faec_Efm_NY1-5_V1	-	EnGen0321
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14603	52.4	-	CQOE01	66	2507	2187	3/23/15	4/10/17	Contig	SC	SAMEA1690502	GCA_001162285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/285/GCA_001162285.1_8289_2_19	-	GCGS019
Enterococcus faecalis EnGen0326	1169249	PRJNA158745	158745	Terrabacteria group	Firmicutes	2.97125	37.6	-	ASEI01	8	3014	2868	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00839766	GCA_000393555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/555/GCA_000393555.1_Ente_faec_Merz204_V1	-	Merz204
Campylobacter jejuni subsp. jejuni NCTC 11168-K12E5	1385720	PRJNA215043	215043	Proteobacteria	delta/epsilon subdivisions	1.64148	30.5	chromosome:NZ_CP006685.1/CP006685.1	-	1	1715	1633	2/28/14	3/16/17	Complete Genome	Agriculture & Agri-Food Canada	SAMN02316405	GCA_000830775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/775/GCA_000830775.1_ASM83077v1	24516617	NCTC 11168-K12E5
Klebsiella pneumoniae UCI 41	1400182	PRJNA219293	219293	Proteobacteria	Gammaproteobacteria	5.74095	57	-	JCMA01	7	5803	5536	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02356621	GCA_000566785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/785/GCA_000566785.1_Kleb_pneu_UCI_41_V1	-	UCI 41
Vibrio parahaemolyticus S074	1394617	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.13881	45.1	-	AWKR01	689	4910	4684	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338931	GCA_000490775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/775/GCA_000490775.1_S074	-	S074
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.9366	37.8	-	MLKY01	596	1994	1675	1/9/17	3/28/17	Contig	Australian Wine Research Institute	SAMN04297012	GCA_001939425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/425/GCA_001939425.1_ASM193942v1	27118061	AWRIB121
Brucella abortus 90-12178	1341674	PRJNA217069	217069	Proteobacteria	Alphaproteobacteria	3.52854	57.2	-	AXMS01	6	3420	3355	10/24/13	10/24/13	Contig	Broad Institute	SAMN02334523	GCA_000480015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/015/GCA_000480015.1_Bruc_abor_90-12178_V1	-	90-12178
Clostridioides difficile DA00305	1151359	PRJNA85893	85893	Terrabacteria group	Firmicutes	3.98816	28.4	-	AVKH01	674	3811	3571	8/20/13	3/15/17	Contig	Institute for Genome Sciences	SAMN01766676	GCA_000451345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/345/GCA_000451345.1_ASM45134v1	-	DA00305
Vibrio cholerae RC27	675807	PRJNA40505	40505	Proteobacteria	Gammaproteobacteria	4.01178	47.4	-	ADAI01	45	3868	3594	10/23/09	3/22/17	Contig	"Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR)"	SAMN02393826	GCA_000176395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/395/GCA_000176395.1_ASM17639v1	-	RC27
Bacillus thuringiensis	1428	PRJNA292320	292320	Terrabacteria group	Firmicutes	6.36403	34.9	-	LIIT01	261	6536	5356	10/22/15	12/16/15	Scaffold	Universidade Estadual de Londrina	SAMN03968759	GCA_001402735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/735/GCA_001402735.1_ASM140273v1	26659669	BR58
Burkholderia pseudomallei str. NCTC 13392 substr. morphotype_7	1343562	PRJNA177946	177946	Proteobacteria	Betaproteobacteria	6.98249	68.2	-	AUVN01	155	7286	6747	8/26/13	3/24/17	Contig	JCVI	SAMN01768102	GCA_000454665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/665/GCA_000454665.1_Final_Assembly	24201202	NCTC 13392 substr. morphotype_7
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.33741	67	-	MUWC01	153	7939	7491	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001992	GCA_001994085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/085/GCA_001994085.1_ASM199408v1	-	VC4895
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.71821	50.5	-	FUAI01	414	5249	4490	1/28/17	2/26/17	Contig	SC	SAMEA1569765	GCA_900159645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/645/GCA_900159645.1_8489_1_89	-	sh1377
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.44651	38.3	-	FJFV01	21	3157	3046	2/20/16	3/27/17	Contig	SC	SAMEA2080619	GCA_900052295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/295/GCA_900052295.1_10625_2_56	-	2532STDY5467529
Pseudomonas syringae pv. actinidiae ICMP 19497	1208099	PRJNA295874	295874	Proteobacteria	Gammaproteobacteria	6.3157	58.6	-	LKBQ01	233	5888	5537	12/15/15	3/27/17	Scaffold	New Zealand Institute for Plant & Food research	SAMN04092567	GCA_001467225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/225/GCA_001467225.1_ASM146722v1	27056212	ICMP 19497
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.1218	41.1	-	CEFD01	171	2135	2010	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233936	GCA_000942035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/035/GCA_000942035.1_Velvet_assembly	-	LS6S
Streptococcus agalactiae STIR-CD-26	1154854	PRJNA86367	86367	Terrabacteria group	Firmicutes	2.02864	35.3	-	ANEL01	44	2091	1975	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993656	GCA_000310325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/325/GCA_000310325.1_ASM31032v1	-	STIR-CD-26
Acinetobacter baumannii OIFC109	903892	PRJNA53383	53383	Proteobacteria	Gammaproteobacteria	4.10712	39.0016	plasmid pOIFC109-122:NZ_ALAL01000013.1/ALAL01000013.1	ALAL01	13	3988	3797	7/16/12	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN02436409	GCA_000278645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/645/GCA_000278645.1_AcbauOIFC109v1.0	-	OIFC109
Pseudomonas aeruginosa BWHPSA006	1402506	PRJNA219867	219867	Proteobacteria	Gammaproteobacteria	6.96009	66.1	-	AXQW01	8	6590	6406	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360678	GCA_000481585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/585/GCA_000481585.1_Pseu_aeru_BWH006_V1	-	BWHPSA006
Leptospira interrogans	173	PRJNA257237	257237	Spirochaetes	Spirochaetia	4.89282	35.1	-	JQQW01	301	4613	4125	2/24/16	4/10/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN02949530	GCA_001569125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/125/GCA_001569125.1_ASM156912v1	26833181	56610
Streptococcus pyogenes GA40884	1115827	PRJNA78637	78637	Terrabacteria group	Firmicutes	1.83191	38.2	-	AWUA01	28	1811	1683	11/25/13	3/24/17	Contig	J. Craig Venter Institute	SAMN02436405	GCA_000499245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/245/GCA_000499245.1_SpyogGA40884v1.0	-	GA40884
Neisseria meningitidis NM3042	1145185	PRJNA83583	83583	Proteobacteria	Betaproteobacteria	2.17767	52	-	APUT01	146	2511	2119	5/1/13	3/21/17	Contig	IGS	SAMN01780136	GCA_000386065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/065/GCA_000386065.2_ASM38606v2	-	NM3042
Helicobacter pylori Hp H-36	992044	PRJNA64115	64115	Proteobacteria	delta/epsilon subdivisions	1.67591	39.1	-	AKOL01	16	1658	1491	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778917	GCA_000273845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/845/GCA_000273845.1_ASM27384v1	-	Hp H-36
Streptococcus pneumoniae GA47760	760846	PRJNA48883	48883	Terrabacteria group	Firmicutes	2.02388	39.8	-	AILD01	14	2213	1967	3/7/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00632918	GCA_000251905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/905/GCA_000251905.2_ASM25190v2	-	GA47760
Campylobacter jejuni subsp. jejuni NCTC 11168-Kf1	1385723	PRJNA215043	215043	Proteobacteria	delta/epsilon subdivisions	1.64148	30.5	chromosome:NZ_CP006686.1/CP006686.1	-	1	1716	1634	2/28/14	3/16/17	Complete Genome	Agriculture & Agri-Food Canada	SAMN02316408	GCA_000830805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/805/GCA_000830805.1_ASM83080v1	24516617	NCTC 11168-Kf1
Mycobacterium tuberculosis SUMu003	675514	PRJNA43607	43607	Terrabacteria group	Actinobacteria	4.37707	65.2	-	ADHS01	63	4388	4106	3/3/10	5/18/17	Scaffold	Broad Institute	SAMN02595382	GCA_000177795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/795/GCA_000177795.2_ASM17779v2	-	SUMu003
Bacillus cereus	1396	PRJEB9876	290051	Terrabacteria group	Firmicutes	5.24725	35.3	-	CYHM01	793	5634	5225	8/27/15	3/26/17	Contig	University of Liverpool	SAMEA3484403	GCA_001286825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/825/GCA_001286825.1_Bacillus_JRS4	-	-
Staphylococcus epidermidis	1282	PRJNA319644	319644	Terrabacteria group	Firmicutes	2.47573	32	-	LYPX01	96	2439	2289	6/6/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN05150008	GCA_001658475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/475/GCA_001658475.1_ASM165847v1	-	A1KF08
Listeria monocytogenes	1639	PRJNA335730	335730	Terrabacteria group	Firmicutes	3.00309	38	-	MCHH01	21	3024	2939	4/21/17	4/24/17	Scaffold	Iowa State University	SAMN05452948	GCA_002103265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/265/GCA_002103265.1_ASM210326v1	-	AB27
Yersinia pestis 780441	755888	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.52576	47.6	-	ADPS01	817	4261	4049	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403014	GCA_000323605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/605/GCA_000323605.1_ASM32360v1	23271803	780441
Campylobacter jejuni subsp. jejuni 2008-872	889252	PRJNA52929	52929	Proteobacteria	delta/epsilon subdivisions	1.60231	30.4	-	AIOR01	114	1706	1582	3/16/12	3/15/17	Contig	Cornell University	SAMN02428948	GCA_000254635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/635/GCA_000254635.2_ASM25463v2	-	2008-872
Campylobacter jejuni subsp. jejuni NCTC 11168-mcK12E5	1385721	PRJNA215043	215043	Proteobacteria	delta/epsilon subdivisions	1.64147	30.5	chromosome:NZ_CP006687.1/CP006687.1	-	1	1718	1636	2/28/14	3/16/17	Complete Genome	Agriculture & Agri-Food Canada	SAMN02316406	GCA_000830825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/825/GCA_000830825.1_ASM83082v1	24516617	NCTC 11168-mcK12E5
Staphylococcus aureus subsp. aureus C160	585150	PRJNA39531	39531	Terrabacteria group	Firmicutes	2.84344	32.8	-	ACUV01	26	2997	2786	12/15/09	3/2/17	Scaffold	Broad Institute	SAMN02595353	GCA_000162855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/855/GCA_000162855.1_ASM16285v1	22535928	C160
Staphylococcus aureus subsp. aureus A017934/97	585147	PRJNA40307	40307	Terrabacteria group	Firmicutes	2.81932	32.8	-	ACYP01	20	2947	2735	12/15/09	3/2/17	Scaffold	Broad Institute	SAMN02595362	GCA_000163335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/335/GCA_000163335.1_ASM16333v1	-	A017934/97
Campylobacter jejuni subsp. jejuni NCTC 11168-mfK12E5	1385722	PRJNA215043	215043	Proteobacteria	delta/epsilon subdivisions	1.64147	30.5	chromosome:NZ_CP006688.1/CP006688.1	-	1	1717	1636	2/28/14	3/16/17	Complete Genome	Agriculture & Agri-Food Canada	SAMN02316407	GCA_000830845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/845/GCA_000830845.1_ASM83084v1	24516617	NCTC 11168-mfK12E5
Campylobacter jejuni subsp. jejuni 2008-988	889253	PRJNA52931	52931	Proteobacteria	delta/epsilon subdivisions	1.82078	30.2	-	AIOS01	206	1956	1846	3/16/12	3/15/17	Contig	Cornell University	SAMN02428949	GCA_000254655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/655/GCA_000254655.2_ASM25465v2	-	2008-988
Yersinia pestis 9	755896	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.4522	47.7	-	ADPT01	1336	4368	3907	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403015	GCA_000323625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/625/GCA_000323625.1_ASM32362v1	23271803	9
Listeria monocytogenes	1639	PRJNA335730	335730	Terrabacteria group	Firmicutes	3.1335	37.9	-	MCHM01	35	3223	3125	4/21/17	4/24/17	Scaffold	Iowa State University	SAMN05453154	GCA_002103325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/325/GCA_002103325.1_ASM210332v1	-	P01-012
Staphylococcus epidermidis	1282	PRJNA319644	319644	Terrabacteria group	Firmicutes	2.37754	32.1	-	LYQE01	56	2320	2219	6/6/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN05150063	GCA_001658525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/525/GCA_001658525.1_ASM165852v1	-	Qt1p44
Bacillus cereus	1396	PRJNA294688	294688	Terrabacteria group	Firmicutes	5.40379	35.2	-	LJXA01	28	5779	5388	10/16/15	3/26/17	Contig	Los Alamos National Laboratory	SAMN04028667	GCA_001317525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/525/GCA_001317525.1_CBN_33	26659672	S612
Mycobacterium tuberculosis SUMu004	675515	PRJNA43609	43609	Terrabacteria group	Actinobacteria	4.37157	65.2	-	ADHT01	64	4394	4104	3/3/10	5/18/17	Scaffold	Broad Institute	SAMN02595383	GCA_000177815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/815/GCA_000177815.2_ASM17781v2	-	SUMu004
Campylobacter jejuni subsp. jejuni NCTC 11168-GSv	1385724	PRJNA215043	215043	Proteobacteria	delta/epsilon subdivisions	1.64148	30.5	chromosome:NZ_CP006689.1/CP006689.1	-	1	1718	1635	2/28/14	3/16/17	Complete Genome	Agriculture & Agri-Food Canada	SAMN02316409	GCA_000830865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/865/GCA_000830865.1_ASM83086v1	24516617	NCTC 11168-rNRC
Streptococcus pneumoniae GA47794	760848	PRJNA48887	48887	Terrabacteria group	Firmicutes	2.10424	39.6	-	AILQ01	9	2287	2012	3/7/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00738292	GCA_000251925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/925/GCA_000251925.2_ASM25192v2	-	GA47794
Helicobacter pylori Hp H-30	992043	PRJNA64113	64113	Proteobacteria	delta/epsilon subdivisions	1.62539	39.4	-	AKOK01	11	1585	1418	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778887	GCA_000273865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/865/GCA_000273865.2_ASM27386v2	23661595	Hp H-30
Neisseria meningitidis 69155	1145119	PRJNA83451	83451	Proteobacteria	Betaproteobacteria	2.21037	51.8	-	APSF01	153	2577	2178	5/1/13	3/21/17	Contig	IGS	SAMN01779695	GCA_000386085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/085/GCA_000386085.2_ASM38608v2	-	69155
Streptococcus pyogenes GA19702	1115829	PRJNA78641	78641	Terrabacteria group	Firmicutes	1.89893	38.3	-	AWUC01	35	1887	1777	11/25/13	3/24/17	Contig	J. Craig Venter Institute	SAMN02436399	GCA_000499265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/265/GCA_000499265.1_SpyogGA19702v1.0	-	GA19702
Leptospira interrogans	173	PRJNA311750	311750	Spirochaetes	Spirochaetia	4.41422	36	-	LSSQ01	87	3990	3636	3/9/16	3/27/17	Contig	Northern Arizona University	SAMN04488387	GCA_001584245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/245/GCA_001584245.1_ASM158424v1	27151788	ZV013
Pseudomonas aeruginosa BWHPSA005	1402505	PRJNA219866	219866	Proteobacteria	Gammaproteobacteria	6.7863	66.1	-	AXQX01	4	6470	6301	10/24/13	3/9/17	Scaffold	Broad Institute	SAMN02360677	GCA_000481605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/605/GCA_000481605.1_Pseu_aeru_BWH005_V1	-	BWHPSA005
Acinetobacter baumannii OIFC143	903893	PRJNA53385	53385	Proteobacteria	Gammaproteobacteria	4.44133	39.1192	plasmid pOIFC143-128:NZ_AFDL01000008.1/AFDL01000008.1; plasmid pOIFC143-2.3:NZ_AFDL01000005.1/AFDL01000005.1; plasmid pOIFC143-6.2:NZ_AFDL01000007.1/AFDL01000007.1; plasmid pOIFC143-70:NZ_AFDL01000006.1/AFDL01000006.1	AFDL01	8	4386	4167	7/16/12	5/18/17	Contig	Walter Reed Army Institute of Research	SAMN02436631	GCA_000278665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/665/GCA_000278665.1_AcbauOIFC143v1.0	-	OIFC143
Streptococcus agalactiae MRI Z1-049	1154872	PRJNA86403	86403	Terrabacteria group	Firmicutes	2.0364	35.2	-	ANER01	200	2237	1981	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993334	GCA_000310345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/345/GCA_000310345.1_ASM31034v1	-	MRI Z1-049
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04014	41.2	-	CEIM01	79	2024	1921	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234029	GCA_000942055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/055/GCA_000942055.1_Velvet_assembly	-	S17G
Pseudomonas syringae ICMP 11168	1198308	PRJNA296732	296732	Proteobacteria	Gammaproteobacteria	5.96698	59.1	-	LKGV01	97	5351	5080	12/15/15	3/27/17	Scaffold	New Zealand Institute for Plant & Food research	SAMN04102817	GCA_001467285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/285/GCA_001467285.1_ASM146728v1	27056212	ICMP 11168
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.411	38.3	-	FJFW01	22	3117	3012	2/20/16	3/27/17	Contig	SC	SAMEA2077523	GCA_900052305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/305/GCA_900052305.1_10625_2_1	-	2532STDY5467474
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.72088	50.5	-	FUAL01	415	5347	4471	1/28/17	2/26/17	Contig	SC	SAMEA1569797	GCA_900159685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/685/GCA_900159685.1_8489_1_93	-	sh1381
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.55329	67	-	MUWB01	177	8193	7724	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001991	GCA_001994115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/115/GCA_001994115.1_ASM199411v1	-	VC4386
Burkholderia pseudomallei str. NCTC 13392 substr. morphotype_9	1343564	PRJNA177949	177949	Proteobacteria	Betaproteobacteria	7.0548	68.2	-	AUVP01	140	7375	6822	8/26/13	3/24/17	Contig	JCVI	SAMN01768100	GCA_000454685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/685/GCA_000454685.1_Final_Assembly	24201202	NCTC 13392 substr. morphotype_9
Bacillus thuringiensis	1428	PRJNA304098	304098	Terrabacteria group	Firmicutes	6.7829	34.7	-	LOMJ01	700	-	-	1/19/16	1/19/16	Scaffold	Universidade Estadual de Londrina	SAMN04295068	GCA_001517195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/195/GCA_001517195.1_BR37	-	BR37
Vibrio cholerae INDRE 91/1	675808	PRJNA40503	40503	Proteobacteria	Gammaproteobacteria	3.94771	47.5	-	ADAK01	60	3813	3532	10/23/09	3/22/17	Contig	"Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR)"	SAMN02393825	GCA_000176435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/435/GCA_000176435.1_ASM17643v1	-	INDRE 91/1
Clostridioides difficile Y165	1151377	PRJNA85929	85929	Terrabacteria group	Firmicutes	4.26377	28.4	-	AVKV01	367	4045	3851	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766737	GCA_000451365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/365/GCA_000451365.2_ASM45136v2	-	Y165
Brucella abortus 07-0994-2411	1341672	PRJNA217058	217058	Proteobacteria	Alphaproteobacteria	3.5043	57.2	-	AXND01	30	3406	3342	10/24/13	10/24/13	Contig	Broad Institute	SAMN02334512	GCA_000480235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/235/GCA_000480235.1_Bruc_abor_07-0994-2411_V1	-	07-0994-2411
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.9468	37.9	-	MLMA01	249	1981	1726	1/9/17	3/28/17	Contig	Australian Wine Research Institute	SAMN04297040	GCA_001939435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/435/GCA_001939435.1_ASM193943v1	27118061	AWRIB324
Vibrio parahaemolyticus S073	1394616	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.05992	45.3	-	AWKS01	530	4861	4644	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338930	GCA_000490795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/795/GCA_000490795.1_S073	-	S073
Klebsiella pneumoniae UCI 38	1400181	PRJNA219289	219289	Proteobacteria	Gammaproteobacteria	5.76442	57	-	JCMB01	11	5829	5547	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02356618	GCA_000566805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/805/GCA_000566805.1_Kleb_pneu_UCI_38_V1	-	UCI 38
Clostridium botulinum C str. Stockholm	929505	PRJNA60409	60409	Terrabacteria group	Firmicutes	2.40738	27.451	plasmid p3CbCSt:CM003369.1; plasmid p6CBCSt:CM003370.1	AESA02	479	2520	1722	6/24/11	7/31/15	Scaffold	"National Veterinary Institute (SVA), Sweden"	SAMN02470656	GCA_000219255.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/255/GCA_000219255.3_CSt2.0	21486474	Stockholm
Enterococcus faecalis EnGen0334	1169247	PRJNA158747	158747	Terrabacteria group	Firmicutes	2.96343	37.4	-	ASEJ01	5	3026	2890	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00839767	GCA_000393575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/575/GCA_000393575.1_Ente_faec_D1_V1	-	D1
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.10206	52.6	-	CQLX01	72	2481	2148	3/23/15	4/10/17	Contig	SC	SAMEA1690456	GCA_001162645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/645/GCA_001162645.1_8289_2_60	-	GCGS060
Enterococcus faecium EnGen0323	1158651	PRJNA89025	89025	Terrabacteria group	Firmicutes	3.18592	37.9	-	AJDW01	32	3270	3011	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809208	GCA_000394735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/735/GCA_000394735.1_Ente_faec_Efm_NY1-6_V1	-	EnGen0323
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.50261	66.4	-	DGFR01	203	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453101	GCA_002391785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/785/GCA_002391785.1_ASM239178v1	28894102	-
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.1283	41.2	-	CWFU01	76	2066	1882	6/24/15	3/26/17	Contig	SC	SAMEA1032992	GCA_001178745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/745/GCA_001178745.1_6817_1_68	-	EQUI0021
Campylobacter jejuni 4031	1347340	PRJEB4165	217817	Proteobacteria	delta/epsilon subdivisions	1.66933	30.5	chromosome I:NC_022529.1/HG428754.1	-	1	1741	1644	10/2/13	3/15/17	Complete Genome	UH	SAMEA2272246	GCA_000493495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/495/GCA_000493495.1_TS	-	4031
Corynebacterium diphtheriae	1717	PRJNA341832	341832	Terrabacteria group	Actinobacteria	2.51991	53.9	-	MIOR01	165	2453	2246	11/10/16	8/24/17	Scaffold	National Institute for Communicable Diseases	SAMN05729437	GCA_001876295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/295/GCA_001876295.1_ASM187629v1	28726616	ST378-KZN-2016-48412
Lactobacillus plantarum	1590	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.14222	44.5	-	MKFX01	82	3038	2856	2/1/17	3/29/17	Scaffold	ETH Zurich	SAMN05717722	GCA_001981865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/865/GCA_001981865.1_ASM198186v1	-	RI-208
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.18383	60.1	-	FCKV01	33	4912	4757	1/21/16	3/27/17	Scaffold	SC	SAMEA2274043	GCA_001538115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/115/GCA_001538115.1_12082_3_68	-	2880STDY5682971
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.70818	31.3	-	JOVA01	45	1761	1676	11/10/15	3/18/17	Contig	FDA	SAMN02693013	GCA_001441965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/965/GCA_001441965.1_Campylobacter_coli_CVM_N7464_v1.0	-	CVM N7464
Enterobacter cloacae	550	PRJNA287211	287211	Proteobacteria	Gammaproteobacteria	4.219	55.8	-	LFJA01	13	4042	3878	8/18/15	3/26/17	Scaffold	University of Skovde	SAMN03777446	GCA_001270135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/135/GCA_001270135.1_ASM127013v1	27257201	B2-DHA
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.25408	64.1	-	FSAG01	23	5345	5169	12/14/16	3/21/17	Contig	SC	SAMEA2070549	GCA_900131345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/345/GCA_900131345.1_10665_3_81	-	251
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.17085	67.4	-	LPHV01	102	6472	6141	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449547	GCA_001531795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/795/GCA_001531795.1_ASM153179v1	-	MSMB2118WGS
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.16293	54.6	-	LPOO01	87	5127	4886	12/21/15	3/27/17	Contig	JCVI	SAMN04252946	GCA_001473055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/055/GCA_001473055.1_SMART_1020.v1	-	SMART_1020
Pseudomonas sp. NBRC 111131	1661046	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	6.19217	61.8	-	BCBH01	106	5762	5531	10/3/15	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00031666	GCA_001320525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/525/GCA_001320525.1_ASM132052v1	-	NBRC 111131
Streptomyces sp. NRRL S-98	1463922	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.20379	72.5	-	JOJD01	113	7410	7082	7/2/14	3/14/17	Contig	University of Illinois	SAMN02645524	GCA_000720235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/235/GCA_000720235.1_ASM72023v1	-	NRRL S-98
Bacillus sp. JH7	1759556	PRJNA305447	305447	Terrabacteria group	Firmicutes	5.58927	35	-	LPUS01	35	5955	5637	2/18/16	4/12/17	Scaffold	Korea University	SAMN04325319	GCA_001563515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/515/GCA_001563515.1_ASM156351v1	-	JH7
Acinetobacter sp. CAG:196_36_41	1896966	PRJNA321218	321218	Proteobacteria	Gammaproteobacteria	2.08093	35.2	-	MNTZ01	28	2046	1981	12/23/16	12/23/16	Scaffold	None	SAMN05717309	GCA_001917235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/917/235/GCA_001917235.1_ASM191723v1	27819664	-
Clostridium sp. UBA2055	1946349	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.53654	29.8	-	DDAP01	206	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452161	GCA_002332935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/935/GCA_002332935.1_ASM233293v1	28894102	-
Staphylococcus sp. HMSC74G05	1608907	PRJNA274559	274559	Terrabacteria group	Firmicutes	2.77388	32.7	-	LTLO01	51	2906	2751	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498891	GCA_001839445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/445/GCA_001839445.1_ASM183944v1	-	HMSC74G05
Mycobacterium sp. 283mftsu	1761810	PRJEB16651	349912	Terrabacteria group	Actinobacteria	6.05045	67.1	-	FNRC01	29	5803	5646	10/22/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488580	GCA_900107555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/555/GCA_900107555.1_IMG-taxon_2636416058_annotated_assembly	-	283MFTsu
Mycobacterium sp. 88mf	1761813	PRJEB16992	351112	Terrabacteria group	Actinobacteria	6.73483	66.6	-	FOFC01	20	6483	6277	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488583	GCA_900110825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/825/GCA_900110825.1_IMG-taxon_2642422555_annotated_assembly	-	88MF
Staphylococcus sp. HMSC76G03	1608909	PRJNA274561	274561	Terrabacteria group	Firmicutes	2.84296	32.7	-	LTLN01	83	3010	2888	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498894	GCA_001839485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/485/GCA_001839485.1_ASM183948v1	-	HMSC76G03
Acinetobacter sp. UBA991	1945959	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.21106	40.8	-	DBBF01	44	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06452153	GCA_002292065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/292/065/GCA_002292065.1_ASM229206v1	28894102	-
Bacillus sp. FJAT-27264	1850362	PRJNA321800	321800	Terrabacteria group	Firmicutes	6.68175	47.7	-	MAQW01	34	6007	5817	7/9/16	4/13/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN05003917	GCA_001682855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/855/GCA_001682855.1_ASM168285v1	-	FJAT-27264
Streptomyces sp. NRRL WC-3725	1463933	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.0099	71.8	-	JOJH01	1030	8852	8199	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645528	GCA_000720295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/295/GCA_000720295.1_ASM72029v1	-	NRRL WC-3725
Pseudomonas sp. NBRC 111132	1661047	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	6.09154	61.9	-	BCBI01	134	5690	5458	10/3/15	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00031667	GCA_001320565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/565/GCA_001320565.1_ASM132056v1	-	NBRC 111132
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.81384	55.2	-	LPON01	82	4742	4493	12/21/15	3/27/17	Contig	JCVI	SAMN04252947	GCA_001473075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/075/GCA_001473075.1_SMART_1057.v1	-	SMART_1057
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.46048	67.2	-	LPHY01	185	6790	6327	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449550	GCA_001531825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/825/GCA_001531825.1_ASM153182v1	-	MSMB2121WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.25241	64.1	-	FSAE01	23	5345	5171	12/14/16	3/21/17	Contig	SC	SAMEA2068678	GCA_900131355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/355/GCA_900131355.1_10665_3_82	-	252
Enterobacter cloacae subsp. cloacae	336306	PRJNA298075	298075	Proteobacteria	Gammaproteobacteria	4.89396	54.9	-	LKUI01	29	4934	4676	1/5/16	3/27/17	Scaffold	New Jersey Medical School-Rutgers University	SAMN04155457	GCA_001487035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/035/GCA_001487035.1_ASM148703v1	-	SZECL
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.78541	31.3	-	JOVC01	80	1883	1763	11/10/15	3/18/17	Contig	FDA	SAMN02693037	GCA_001441975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/975/GCA_001441975.1_Campylobacter_coli_CVM_N8957_v1.0	-	CVM N8957
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.23157	59.8	-	FCGS01	24	4956	4794	1/21/16	3/27/17	Scaffold	SC	SAMEA2274090	GCA_001538195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/195/GCA_001538195.1_12045_8_14	-	2880STDY5683020
Lactobacillus plantarum	1590	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.07353	44.6	-	MKDH01	123	2986	2806	2/1/17	3/29/17	Scaffold	ETH Zurich	SAMN05717730	GCA_001981955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/955/GCA_001981955.1_ASM198195v1	-	RI-408
Corynebacterium diphtheriae bv. belfanti	2014537	PRJNA313138	313138	Terrabacteria group	Actinobacteria	2.5984	53.6	-	LTAR01	132	2568	2246	6/20/17	6/26/17	Scaffold	Northumbria University	SAMN04515814	GCA_002200975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/975/GCA_002200975.1_ASM220097v1	-	CCUG 5865
Campylobacter jejuni subsp. jejuni 00-2425	1357994	PRJNA211797	211797	Proteobacteria	delta/epsilon subdivisions	1.71898	30.5	chromosome:NC_022362.2/CP006729.2	-	1	1814	1731	9/16/13	3/16/17	Complete Genome	Public Health Agency of Canada	SAMN02603723	GCA_000468915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/915/GCA_000468915.2_ASM46891v2	"2,475,602,424,641,120"	00-2425
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.11134	41.2	-	CVXG01	74	2036	1855	6/23/15	3/26/17	Contig	SC	SAMEA1032993	GCA_001178765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/765/GCA_001178765.1_6817_1_54	-	EQUI0007
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.03723	66.9	-	DGGC01	201	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453882	GCA_002392005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/005/GCA_002392005.1_ASM239200v1	28894102	-
Enterococcus faecium EnGen0312	1158652	PRJNA89027	89027	Terrabacteria group	Firmicutes	3.19264	37.8	-	AJDX01	31	3286	3037	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809209	GCA_000394755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/755/GCA_000394755.1_Ente_faec_Efm_NY3-1_V1	-	EnGen0312
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.15191	52.4	-	CQLC01	68	2512	2201	3/23/15	4/10/17	Contig	SC	SAMEA1690325	GCA_001162805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/805/GCA_001162805.1_8289_2_95	-	GCGS095
Enterococcus faecalis EnGen0333	1169253	PRJNA158749	158749	Terrabacteria group	Firmicutes	2.91268	37.6	-	ASEK01	5	2993	2831	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00839768	GCA_000393595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/595/GCA_000393595.1_Ente_faec_T4_V1	-	T4
Clostridium botulinum D str. 1873	592027	PRJNA33173	33173	Terrabacteria group	Firmicutes	2.54125	27.7001	plasmid pCLG1:CP001659.1; plasmid pCLG2:CP001660.1	ACSJ01	21	2501	2381	7/9/09	6/16/15	Contig	Los Alamos National Laboratory	SAMN02470277	GCA_000175395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/395/GCA_000175395.2_ASM17539v2	-	1873
Klebsiella pneumoniae UCI 37	1400180	PRJNA219287	219287	Proteobacteria	Gammaproteobacteria	5.76921	57	-	JCMC01	16	5826	5535	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02356617	GCA_000566825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/825/GCA_000566825.1_Kleb_pneu_UCI_37_V1	-	UCI 37
Vibrio parahaemolyticus S072	1394615	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.07554	45.3	-	AWKT01	433	4813	4653	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338929	GCA_000490815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/815/GCA_000490815.1_S072	-	S072
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.87325	37.9	-	MLMM01	290	1904	1687	1/9/17	1/9/17	Contig	Australian Wine Research Institute	SAMN04297052	GCA_001939445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/445/GCA_001939445.1_ASM193944v1	27118061	AWRIB337
Brucella abortus 99-9971-135	1341675	PRJNA217057	217057	Proteobacteria	Alphaproteobacteria	3.43323	57.2	-	AXNE01	39	3327	3267	10/24/13	10/24/13	Contig	Broad Institute	SAMN02334511	GCA_000480255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/480/255/GCA_000480255.1_Bruc_abor_99-9971-135_V1	-	99-9971-135
Clostridioides difficile Y270	1151385	PRJNA85945	85945	Terrabacteria group	Firmicutes	4.14953	28.7	-	AVLD01	53	3887	3724	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766746	GCA_000451385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/385/GCA_000451385.2_ASM45138v2	-	Y270
Vibrio cholerae HC-49A2	991935	PRJNA63877	63877	Proteobacteria	Gammaproteobacteria	4.05937	47.5	-	AFOM01	23	3877	3692	7/15/11	3/22/17	Contig	Institute for Genome Sciences	SAMN02435827	GCA_000220725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/725/GCA_000220725.2_ASM22072v2	-	HC-49A2
Bacillus thuringiensis serovar israelensis ATCC 35646	339854	PRJNA15522	15522	Terrabacteria group	Firmicutes	5.88084	35	-	AAJM01	866	6221	6132	9/13/05	1/8/14	Contig	Integrated Genomics	SAMN02470058	GCA_000167695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/695/GCA_000167695.1_ASM16769v1	-	ATCC 35646
Burkholderia pseudomallei str. NCTC 13392 substr. morphotype_8	1343563	PRJNA177948	177948	Proteobacteria	Betaproteobacteria	7.05622	68.2	-	AUVO01	150	7388	6817	8/26/13	3/24/17	Contig	JCVI	SAMN01768101	GCA_000454705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/705/GCA_000454705.1_Final_Assembly	24201202	NCTC 13392 substr. morphotype_8
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.29073	67	-	MUWD01	162	7908	7450	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001993	GCA_001994135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/135/GCA_001994135.1_ASM199413v1	-	VC5305
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.78582	50.5	-	FUAQ01	424	5423	4559	1/28/17	2/26/17	Contig	SC	SAMEA1569660	GCA_900159745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/745/GCA_900159745.1_8403_8_4	-	sh1388
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.41401	38.3	-	FJFY01	22	3122	3014	2/20/16	3/27/17	Contig	SC	SAMEA2080604	GCA_900052315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/315/GCA_900052315.1_10625_2_5	-	2532STDY5467478
Pseudomonas syringae pv. actinidifoliorum	1674924	PRJNA287746	287746	Proteobacteria	Gammaproteobacteria	6.0993	58.8	-	LJJL01	220	5690	5303	1/5/16	3/27/17	Scaffold	INRA	SAMN03788029	GCA_001497555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/555/GCA_001497555.1_ASM149755v1	-	CFBP8160
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04933	41.1	-	CEIU01	63	2040	1949	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234002	GCA_000942075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/075/GCA_000942075.1_Velvet_assembly	-	S13C
Streptococcus agalactiae FSL S3-586	1154776	PRJNA86143	86143	Terrabacteria group	Firmicutes	2.38072	35.5	-	ANCM01	103	2549	2257	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993335	GCA_000310365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/365/GCA_000310365.1_ASM31036v1	-	FSL S3-586
Acinetobacter baumannii OIFC189	903894	PRJNA53387	53387	Proteobacteria	Gammaproteobacteria	4.04312	39.2659	plasmid pOIFC189-111:NZ_AFDM01000010.1/AFDM01000010.1	AFDM01	10	3928	3739	7/16/12	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00114925	GCA_000278685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/685/GCA_000278685.1_AcbauOIFC189v1.0	-	OIFC189
Pseudomonas aeruginosa BWHPSA004	1402504	PRJNA219865	219865	Proteobacteria	Gammaproteobacteria	6.31327	66.4	-	AXQY01	3	5917	5774	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360676	GCA_000481625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/625/GCA_000481625.1_Pseu_aeru_BWH004_V1	-	BWHPSA004
Leptospira interrogans serovar Bataviae	312175	PRJNA315339	315339	Spirochaetes	Spirochaetia	4.72344	35	-	LUVO01	332	4319	3897	5/23/16	4/10/17	Contig	Institute for Medical Research	SAMN04555632	GCA_001650015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/015/GCA_001650015.1_ASM165001v1	-	LepIMR 22
Streptococcus pyogenes ABC020052211	1439207	PRJNA232989	232989	Terrabacteria group	Firmicutes	1.79998	38.6	-	JJJO01	4	1816	1684	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567338	GCA_000628005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/005/GCA_000628005.1_Stre_pyog_ABC020052211_V1	-	ABC020052211
Neisseria meningitidis 69176	1145120	PRJNA83453	83453	Proteobacteria	Betaproteobacteria	2.20253	51.8	-	APSG01	138	2545	2159	5/1/13	3/21/17	Contig	IGS	SAMN01780070	GCA_000386105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/105/GCA_000386105.2_ASM38610v2	-	69176
Helicobacter pylori Hp H-29	992042	PRJNA64111	64111	Proteobacteria	delta/epsilon subdivisions	1.67761	39.1	-	AKOJ01	16	1642	1480	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778898	GCA_000273885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/885/GCA_000273885.1_ASM27388v1	-	Hp H-29
Streptococcus pneumoniae GA49194	760852	PRJNA48895	48895	Terrabacteria group	Firmicutes	2.09315	39.7	-	AILE01	4	2290	2034	3/7/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00718785	GCA_000251945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/945/GCA_000251945.2_ASM25194v2	-	GA49194
Campylobacter jejuni subsp. jejuni 00-2538	1380768	PRJNA213842	213842	Proteobacteria	delta/epsilon subdivisions	1.71937	30.5	chromosome:NC_022351.2/CP006707.2	-	1	1818	1731	9/12/13	3/16/17	Complete Genome	Public Health Agency of Canada	SAMN02603725	GCA_000466065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/065/GCA_000466065.2_ASM46606v2	24641125	00-2538
Mycobacterium tuberculosis SUMu005	675516	PRJNA43611	43611	Terrabacteria group	Actinobacteria	4.37609	65.1	-	ADHU01	55	4387	4047	3/3/10	5/18/17	Scaffold	Broad Institute	SAMN02595384	GCA_000177835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/835/GCA_000177835.2_ASM17783v2	-	SUMu005
Bacillus cereus	1396	PRJNA309386	309386	Terrabacteria group	Firmicutes	5.69087	35.3	-	LRPI01	225	6237	5905	1/27/16	3/27/17	Contig	PharmaSea	SAMN04432438	GCA_001541995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/995/GCA_001541995.1_ASM154199v1	27056214	PE8-121b
Staphylococcus epidermidis	1282	PRJNA319644	319644	Terrabacteria group	Firmicutes	2.3996	32.1	-	LYQA01	72	2338	2219	6/6/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN05150058	GCA_001658535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/535/GCA_001658535.1_ASM165853v1	-	KED12
Listeria monocytogenes	1639	PRJNA335730	335730	Terrabacteria group	Firmicutes	3.13063	37.8	-	MCHN01	38	3233	3136	4/21/17	4/24/17	Scaffold	Iowa State University	SAMN05453199	GCA_002103335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/335/GCA_002103335.1_ASM210333v1	-	P01-015
Yersinia pestis 91	755893	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.36627	47.7	-	ADPU01	906	4171	3887	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403016	GCA_000323645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/645/GCA_000323645.1_ASM32364v1	23271803	91
Campylobacter jejuni subsp. jejuni 1997-1	889221	PRJNA52867	52867	Proteobacteria	delta/epsilon subdivisions	1.6043	30.4	-	AIOT01	112	1681	1565	3/16/12	3/15/17	Contig	Cornell University	SAMN02428963	GCA_000254675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/675/GCA_000254675.2_ASM25467v2	-	1997-1
Campylobacter jejuni subsp. jejuni 00-2426	1380767	PRJNA213841	213841	Proteobacteria	delta/epsilon subdivisions	1.68081	30.5	chromosome:NC_022352.2/CP006708.2	-	1	1763	1675	9/12/13	3/16/17	Complete Genome	Public Health Agency of Canada	SAMN02603724	GCA_000466105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/105/GCA_000466105.2_ASM46610v2	24641125	00-2426
Staphylococcus aureus subsp. aureus EMRSA16	585154	PRJNA41351	41351	Terrabacteria group	Firmicutes	2.90261	32.8	-	ADAT01	26	3050	2827	4/20/10	3/2/17	Scaffold	Broad Institute	SAMN02595365	GCA_000163575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/575/GCA_000163575.1_ASM16357v1	-	EMRSA16
Staphylococcus aureus subsp. aureus ATCC 51811	762962	PRJNA48445	48445	Terrabacteria group	Firmicutes	2.77858	32.8	-	ADVP01	27	2904	2738	5/26/10	3/2/17	Scaffold	Baylor College of Medicine	SAMN00139434	GCA_000164715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/715/GCA_000164715.1_ASM16471v1	-	ATCC 51811
Campylobacter jejuni 32488	1338035	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.7024	30.5	chromosome:NC_021834.1/CP006006.1	-	1	1775	1658	7/16/13	3/15/17	Complete Genome	University of California at Davis	SAMN02179883	GCA_000430385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/385/GCA_000430385.1_ASM43038v1	-	32488
Campylobacter jejuni subsp. jejuni 2008-979	889254	PRJNA52933	52933	Proteobacteria	delta/epsilon subdivisions	1.79843	30.2	-	AIOU01	217	1941	1761	3/16/12	3/15/17	Contig	Cornell University	SAMN02428950	GCA_000254695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/695/GCA_000254695.2_ASM25469v2	-	2008-979
Yersinia pestis 945	755894	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.22675	48.1	-	ADPV01	1243	3978	3647	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403017	GCA_000323665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/665/GCA_000323665.1_ASM32366v1	23271803	945
Listeria monocytogenes	1639	PRJNA335730	335730	Terrabacteria group	Firmicutes	3.00768	37.9	-	MCHO01	19	3042	2961	4/21/17	4/24/17	Scaffold	Iowa State University	SAMN05453200	GCA_002103345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/345/GCA_002103345.1_ASM210334v1	-	P02-001
Staphylococcus epidermidis	1282	PRJNA319644	319644	Terrabacteria group	Firmicutes	2.49695	32	-	LYQB01	75	2466	2312	6/6/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN05150064	GCA_001658555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/555/GCA_001658555.1_ASM165855v1	-	XE_C06
Bacillus cereus	1396	PRJNA288272	288272	Terrabacteria group	Firmicutes	5.41125	35.4	-	LQZO01	278	5897	5417	2/23/16	3/27/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN03797561	GCA_001566355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/355/GCA_001566355.1_ASM156635v1	27284145	DSM 2302
Mycobacterium tuberculosis SUMu006	675517	PRJNA43613	43613	Terrabacteria group	Actinobacteria	4.36568	65.2	-	ADHV01	58	4384	4004	3/3/10	5/18/17	Scaffold	Broad Institute	SAMN02595385	GCA_000177855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/855/GCA_000177855.2_ASM17785v2	-	SUMu006
Campylobacter jejuni subsp. jejuni PT14	1201032	PRJNA168989	168989	Proteobacteria	delta/epsilon subdivisions	1.6353	30.5	chromosome:NC_018709.4/CP003871.4	-	1	1699	1617	10/3/12	3/19/17	Complete Genome	University of Nottingham	SAMN02604234	GCA_000302555.4	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/555/GCA_000302555.4_ASM30255v4	"2,426,549,825,601,850"	PT14
Streptococcus pneumoniae GA49542	760855	PRJNA48901	48901	Terrabacteria group	Firmicutes	2.14525	39.7	-	AILF01	9	2374	2094	3/7/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00632919	GCA_000251965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/965/GCA_000251965.2_ASM25196v2	-	GA49542
Helicobacter pylori Hp H-42	992047	PRJNA64121	64121	Proteobacteria	delta/epsilon subdivisions	1.70229	39.1	-	AKON01	19	1680	1502	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778881	GCA_000273905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/905/GCA_000273905.1_ASM27390v1	-	Hp H-42
Neisseria meningitidis 70021	1145121	PRJNA83455	83455	Proteobacteria	Betaproteobacteria	2.21186	51.9	-	APSH01	138	2574	2155	5/1/13	3/21/17	Contig	IGS	SAMN01780071	GCA_000386125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/125/GCA_000386125.2_ASM38612v2	-	70021
Streptococcus pyogenes ABC020047955	1439165	PRJNA233016	233016	Terrabacteria group	Firmicutes	1.82978	38.5	-	JJJP01	2	1878	1754	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567365	GCA_000628025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/025/GCA_000628025.1_Stre_pyog_ABC020047955_V1	-	ABC020047955
Leptospira interrogans serovar Pomona	44276	PRJNA361446	361446	Spirochaetes	Spirochaetia	4.5947	35	-	MTJU01	74	4237	3716	1/23/17	4/10/17	Contig	School of Veterinary Medicine and Animal Science / University of Sao Paulo	SAMN06233881	GCA_001969075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/075/GCA_001969075.1_ASM196907v1	-	GR5
Pseudomonas aeruginosa BWHPSA003	1402503	PRJNA219864	219864	Proteobacteria	Gammaproteobacteria	6.89385	65.8	-	AXQZ01	13	6479	6262	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360675	GCA_000481645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/645/GCA_000481645.1_Pseu_aeru_BWH003_V1	-	BWHPSA003
Acinetobacter baumannii IS-123	903899	PRJNA53397	53397	Proteobacteria	Gammaproteobacteria	4.06308	38.9783	plasmid pIS123-12:NZ_ALII01000018.1/ALII01000018.1; plasmid pIS123-18:NZ_ALII01000019.1/ALII01000019.1; plasmid pIS123-67:NZ_ALII01000020.1/ALII01000020.1	ALII01	20	3979	3681	8/10/12	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN02436485	GCA_000286535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/535/GCA_000286535.1_gacin11v1.0	-	IS-123
Streptococcus agalactiae MRI Z1-219	1154882	PRJNA86423	86423	Terrabacteria group	Firmicutes	2.08762	35.2	-	ANEV01	26	2162	2048	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993315	GCA_000310385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/385/GCA_000310385.1_ASM31038v1	-	MRI Z1-219
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.18658	41	-	CEFE01	131	2210	2067	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233941	GCA_000942095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/095/GCA_000942095.1_Velvet_assembly	-	LS7H
Pseudomonas syringae pv. actinidifoliorum	1674924	PRJNA287872	287872	Proteobacteria	Gammaproteobacteria	6.10409	58.8	-	LJJM01	204	5710	5308	1/5/16	3/27/17	Scaffold	INRA	SAMN03788032	GCA_001497595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/595/GCA_001497595.1_ASM149759v1	-	CFBP8039
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.53974	38.3	-	FJKF01	57	3235	3089	2/20/16	3/27/17	Contig	SC	SAMEA2080698	GCA_900052325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/325/GCA_900052325.1_10625_3_35	-	2532STDY5467604
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.58019	50.8	-	FUAV01	375	5132	4341	1/28/17	2/26/17	Contig	SC	SAMEA1569698	GCA_900159785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/785/GCA_900159785.1_8403_8_8	-	sh1392
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.54861	66.9	-	MUWE01	166	7215	6790	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001994	GCA_001994145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/145/GCA_001994145.1_ASM199414v1	-	VC5617
Burkholderia pseudomallei str. NCTC 13392 substr. morphotype_10	1343565	PRJNA177950	177950	Proteobacteria	Betaproteobacteria	7.06877	68.2	-	AWEO01	158	7328	6824	9/6/13	3/24/17	Contig	JCVI	SAMN01768099	GCA_000464685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/685/GCA_000464685.1_Final_Assembly	24201202	NCTC 13392 substr. morphotype_10
Bacillus thuringiensis	1428	PRJNA260745	260745	Terrabacteria group	Firmicutes	9.83967	39.7	-	JYCI01	499	-	-	3/5/15	3/5/15	Contig	Los Alamos National Laboratory	SAMN03025783	GCA_000948155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/155/GCA_000948155.1_BFA_7_A	-	Et10/1
Vibrio cholerae HCUF01	991930	PRJNA63867	63867	Proteobacteria	Gammaproteobacteria	4.06755	47.5	-	AFOO01	22	3897	3706	7/15/11	3/27/17	Contig	Institute for Genome Sciences	SAMN02435828	GCA_000220745.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/745/GCA_000220745.3_ASM22074v3	-	HCUF01
Clostridioides difficile Y312	1151387	PRJNA85949	85949	Terrabacteria group	Firmicutes	4.05437	28.2	-	AVLF01	160	3767	3622	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766762	GCA_000451405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/405/GCA_000451405.2_ASM45140v2	-	Y312
Brucella abortus 544	1169205	PRJNA254449	254449	Proteobacteria	Alphaproteobacteria	3.28941	57.2	-	JPHK01	33	3115	2613	8/13/14	5/27/15	Contig	Madurai Kamaraj University	SAMN02904715	GCA_000739315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/315/GCA_000739315.1_ASM73931v1	25953161	544
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	1.89161	38	-	MLPG01	184	1951	1740	1/9/17	3/28/17	Contig	Australian Wine Research Institute	SAMN04297124	GCA_001939485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/485/GCA_001939485.1_ASM193948v1	27118061	AWRIB867
Vibrio parahaemolyticus S071	1394614	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.08452	45.2	-	AWKU01	424	4844	4662	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338928	GCA_000490835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/835/GCA_000490835.1_S071	-	S071
Klebsiella pneumoniae UCI 34	1400179	PRJNA219284	219284	Proteobacteria	Gammaproteobacteria	5.60883	57.2	-	JCMD01	7	5677	5386	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02356614	GCA_000566845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/845/GCA_000566845.1_Kleb_pneu_UCI_34_V1	-	UCI 34
Clostridium botulinum CFSAN001627	1232189	PRJNA175310	175310	Terrabacteria group	Firmicutes	4.07681	28.1	-	AMXI01	1743	4376	4343	10/22/12	11/19/13	Contig	FDA	SAMN01816400	GCA_000307635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/635/GCA_000307635.1_ASM30763v1	-	CFSAN001627
Enterococcus faecalis EnGen0328	1169245	PRJNA158751	158751	Terrabacteria group	Firmicutes	2.95516	37.6	-	ASEL01	5	3074	2892	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00839769	GCA_000393615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/615/GCA_000393615.1_Ente_faec_A-2-1_V1	-	A-2-1
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.15331	52.4	-	CQIH01	76	2511	2189	3/23/15	4/10/17	Contig	SC	SAMEA1690412	GCA_001163145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/145/GCA_001163145.1_8289_2_87	-	GCGS087
Enterococcus faecium EnGen0156	1157451	PRJNA88331	88331	Terrabacteria group	Firmicutes	2.62101	38.3	-	AIUD01	7	2658	2431	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808982	GCA_000395425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/425/GCA_000395425.1_Ente_faec_S658-3_V1	-	S658-3
Stenotrophomonas maltophilia	40324	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.94353	67.1	-	DHAC01	52	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450668	GCA_002397305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/397/305/GCA_002397305.1_ASM239730v1	28894102	-
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.13104	41.2	-	CWAY01	79	2068	1882	6/23/15	3/26/17	Contig	SC	SAMEA1032994	GCA_001178785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/785/GCA_001178785.1_6903_4_51	-	EQUI0100
Campylobacter jejuni subsp. jejuni NCTC 11168-BN148	1211776	PRJEB175	173347	Proteobacteria	delta/epsilon subdivisions	1.64148	30.5	chromosome I:NC_018521.1/HE978252.1	-	1	1716	1633	8/16/12	3/15/17	Complete Genome	University of Helsinki	SAMEA2271917	GCA_000304375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/375/GCA_000304375.1_AINO	23105049	NCTC 11168-BN148
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.45458	53.5	-	LSVO01	34	2364	2197	6/20/17	6/22/17	Scaffold	Northumbria University	SAMN04496958	GCA_002202355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/355/GCA_002202355.1_S29	-	300
Lactobacillus plantarum	1590	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.0847	44.6	-	MKDP01	90	3000	2818	2/1/17	3/29/17	Scaffold	ETH Zurich	SAMN05717740	GCA_001981985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/985/GCA_001981985.1_ASM198198v1	-	RI-086
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.0114	60.2	-	FCMG01	19	4732	4578	1/21/16	3/27/17	Scaffold	SC	SAMEA2273984	GCA_001538275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/275/GCA_001538275.1_12082_5_36	-	2880STDY5682912
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.83757	31	-	JOVF01	200	1931	1787	11/10/15	3/18/17	Contig	FDA	SAMN02693038	GCA_001442015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/015/GCA_001442015.1_Campylobacter_coli_CVM_N9077_v1.0	-	CVM N9077
Enterobacter cloacae	550	PRJNA311932	311932	Proteobacteria	Gammaproteobacteria	4.79299	55.5	-	LSUR01	42	4692	4502	5/31/16	3/28/17	Scaffold	National Institute of Health Dr Ricardo Jorge	SAMN04497989	GCA_001653545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/545/GCA_001653545.1_ASM165354v1	-	INSali2
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.27034	64.1	-	FSAH01	26	5342	5164	12/14/16	3/21/17	Contig	SC	SAMEA2071355	GCA_900131365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/365/GCA_900131365.1_10665_3_83	-	253
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	8.03518	67	-	LPHZ01	144	7315	6893	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449551	GCA_001531835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/835/GCA_001531835.1_ASM153183v1	-	MSMB2122WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.25584	55.1	-	LPOL01	117	5249	4961	12/21/15	3/27/17	Contig	JCVI	SAMN04252949	GCA_001473115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/115/GCA_001473115.1_SMART_1078.v1	-	SMART_1078
Pseudomonas sp. NBRC 111133	1661048	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	6.46692	61.4	-	BCBJ01	188	6214	5888	10/3/15	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00031668	GCA_001320605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/605/GCA_001320605.1_ASM132060v1	-	NBRC 111133
Streptomyces sp. NRRL B-1347	1476877	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.2308	72.4	-	JOJM01	362	8774	8314	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645333	GCA_000720325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/325/GCA_000720325.1_ASM72032v1	-	NRRL B-1347
Bacillus sp. FJAT-26390	1743142	PRJNA321454	321454	Terrabacteria group	Firmicutes	7.4333	48.1	-	MAQX01	37	6600	6363	7/9/16	4/10/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN04994729	GCA_001682865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/865/GCA_001682865.1_ASM168286v1	-	FJAT-26390
Acinetobacter sp. UBA801	1945958	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.43634	41.3	-	DBIN01	60	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451076	GCA_002296655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/655/GCA_002296655.1_ASM229665v1	28894102	-
Staphylococcus sp. HMSC77A05	1608911	PRJNA274563	274563	Terrabacteria group	Firmicutes	2.77032	32.7	-	LTLM01	71	2886	2761	10/25/16	4/13/17	Scaffold	The Genome Institute at Washington University	SAMN04498902	GCA_001839495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/495/GCA_001839495.1_ASM183949v1	-	HMSC77A05
Mycobacterium sp. 455mf	1761812	PRJEB17273	351477	Terrabacteria group	Actinobacteria	6.73913	66.6	-	FOOB01	21	6483	6275	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488582	GCA_900113075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/075/GCA_900113075.1_IMG-taxon_2639762525_annotated_assembly	-	455MF
uncultured Mycobacterium sp.	171292	PRJEB13035	386645	Terrabacteria group	Actinobacteria	6.83207	66.2	-	FLQS01	92	6985	6914	5/15/17	5/15/17	Contig	Genoscope CEA	SAMEA3906798	GCA_900078375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/375/GCA_900078375.1_MHPYR_PRJEB13035_v1	-	-
Staphylococcus sp. AL1	861530	PRJNA171726	171726	Terrabacteria group	Firmicutes	2.62541	32.3	-	ALOZ01	76	2559	2415	8/20/12	4/17/17	Contig	University of Malaya	SAMN02471867	GCA_000292305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/305/GCA_000292305.1_ASM29230v1	23144375	AL1
Acinetobacter sp. UBA797	1945957	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.35523	41.2	-	DBIR01	68	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455912	GCA_002296945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/945/GCA_002296945.1_ASM229694v1	28894102	-
Bacillus sp. FMQ74	1913579	PRJNA350789	350789	Terrabacteria group	Firmicutes	4.1616	43.3	-	MOEO01	47	4379	4135	11/10/16	4/14/17	Scaffold	Futuremilq Innovation Consortium	SAMN05946063	GCA_001875785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/785/GCA_001875785.1_ASM187578v1	-	FMQ74
Streptomyces sp. NRRL B-24051	1463832	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.5391	71.1	-	JOAE01	94	6660	6366	7/2/14	3/9/17	Contig	University of Illinois	SAMN02645359	GCA_000720405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/405/GCA_000720405.1_ASM72040v1	-	NRRL B-24051
Pseudomonas sp. NBRC 111134	1661049	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	6.14267	62	-	BCBK01	147	5740	5499	10/3/15	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00031669	GCA_001320655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/655/GCA_001320655.1_ASM132065v1	-	NBRC 111134
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.85375	55.3	-	LPOI01	100	4807	4539	12/21/15	3/27/17	Contig	JCVI	SAMN04252952	GCA_001473175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/175/GCA_001473175.1_SMART_1095.v1	-	SMART_1095
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.27443	67.5	-	LPIC01	83	6559	6222	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449554	GCA_001531865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/865/GCA_001531865.1_ASM153186v1	-	MSMB2125WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18037	64.2	-	FSAI01	27	5195	5042	12/14/16	3/21/17	Contig	SC	SAMEA2070550	GCA_900131375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/375/GCA_900131375.1_10665_3_84	-	254
Enterobacter cloacae	550	PRJNA311932	311932	Proteobacteria	Gammaproteobacteria	4.94946	55.4	-	LSUS01	63	4855	4616	5/31/16	3/28/17	Scaffold	National Institute of Health Dr Ricardo Jorge	SAMN04497990	GCA_001653625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/625/GCA_001653625.1_ASM165362v1	-	INSali10
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.81494	31	-	JOUY01	90	1889	1769	11/10/15	3/18/17	Contig	FDA	SAMN02693020	GCA_001442035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/035/GCA_001442035.1_Campylobacter_coli_CVM_N6388_v1.0	-	CVM N6388
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.21225	59.9	-	FCMM01	24	4971	4810	1/21/16	3/27/17	Scaffold	SC	SAMEA2274011	GCA_001538325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/325/GCA_001538325.1_12082_5_42	-	2880STDY5682939
Lactobacillus plantarum	1590	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.3233	44.3	-	MKDQ01	60	3254	3086	2/1/17	3/29/17	Scaffold	ETH Zurich	SAMN05717742	GCA_001982005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/005/GCA_001982005.1_ASM198200v1	-	RI-123
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.437	53.5	-	LSYO01	90	2358	2155	6/20/17	6/22/17	Scaffold	Northumbria University	SAMN04496971	GCA_002202525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/525/GCA_002202525.1_S45	-	1480
Orientia tsutsugamushi str. Ikeda	334380	PRJDA18983	18983	Proteobacteria	Alphaproteobacteria	2.00899	30.5	chromosome:NC_010793.1/AP008981.1	-	1	2097	1544	5/30/08	3/29/17	Complete Genome	Kitasato Institute for Life Sciences	SAMD00060919	GCA_000010205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/205/GCA_000010205.1_ASM1020v1	18508905	Ikeda
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12606	41.2	-	CVZI01	76	2055	1873	6/23/15	3/26/17	Contig	SC	SAMEA1032995	GCA_001178805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/805/GCA_001178805.1_6903_2_15	-	EQUI0064
Enterococcus faecium EnGen0158	1157453	PRJNA88335	88335	Terrabacteria group	Firmicutes	2.81814	38.1	-	AIUF01	24	2896	2648	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808984	GCA_000395445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/445/GCA_000395445.1_Ente_faec_UAA714_V1	-	UAA714
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.15155	52.4	-	CQMW01	75	2513	2199	3/23/15	4/10/17	Contig	SC	SAMEA1690408	GCA_001163365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/365/GCA_001163365.1_8727_8_12	-	GCGS108
Enterococcus faecalis EnGen0330	1169254	PRJNA158753	158753	Terrabacteria group	Firmicutes	2.97256	37.3	-	ASEM01	13	3081	2893	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00839770	GCA_000393635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/635/GCA_000393635.1_Ente_faec_T7_V1	-	T7
Clostridium botulinum CFSAN002367	1302425	PRJNA192664	192664	Terrabacteria group	Firmicutes	3.87396	28	-	AQPT01	164	2504	2475	7/24/13	3/12/14	Contig	FDA	SAMN01940924	GCA_000439615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/615/GCA_000439615.1_CFSAN002367_1.0	24463972	CFSAN002367
Klebsiella pneumoniae UCI 33	1400178	PRJNA219283	219283	Proteobacteria	Gammaproteobacteria	5.80535	57	-	JCME01	17	5925	5652	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02356613	GCA_000566865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/865/GCA_000566865.1_Kleb_pneu_UCI_33_V1	-	UCI 33
Vibrio parahaemolyticus S070	1394613	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.05213	45.3	-	AWKV01	630	4812	4595	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338927	GCA_000490855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/855/GCA_000490855.1_S070	-	S070
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.02993	37.8	-	MLNF01	385	2047	1802	1/9/17	3/28/17	Contig	Australian Wine Research Institute	SAMN04297071	GCA_001939495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/495/GCA_001939495.1_ASM193949v1	27118061	AWRIB435
Brucella abortus LMN2	1408185	PRJNA254446	254446	Proteobacteria	Alphaproteobacteria	3.33479	57.2	-	JPHL01	27	3167	2637	8/13/14	3/17/16	Contig	Madurai Kamaraj University	SAMN02904714	GCA_000739325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/325/GCA_000739325.1_ASM73932v1	26816552	LMN2
Clostridioides difficile Y231	1151382	PRJNA85939	85939	Terrabacteria group	Firmicutes	4.09369	28.6	-	AVLA01	42	3798	3668	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766743	GCA_000451425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/425/GCA_000451425.2_ASM45142v2	-	Y231
Vibrio cholerae HE39	991945	PRJNA63897	63897	Proteobacteria	Gammaproteobacteria	3.9378	47.7	-	AFOQ01	16	3723	3478	7/15/11	3/27/17	Contig	Institute for Genome Sciences	SAMN00222985	GCA_000220765.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/765/GCA_000220765.3_ASM22076v3	-	HE39
Bacillus thuringiensis LM1212	1417985	PRJNA226631	226631	Terrabacteria group	Firmicutes	6.06218	35.5	-	AYPV01	51	-	-	11/29/13	6/18/14	Scaffold	"Institute of Plant Protection, CAAS"	SAMN02470043	GCA_000500585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/585/GCA_000500585.1_Bacillus_thuringiensis_strain_LM1212	24874686	LM1212
Burkholderia pseudomallei MSHR6137	1408264	PRJNA222496	222496	Proteobacteria	Betaproteobacteria	7.20802	68.1	-	AXDS01	65	7500	6900	12/2/13	3/24/17	Contig	Menzies School of Health Research	SAMN02370912	GCA_000500655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/655/GCA_000500655.1_MSHR6137	25631791	MSHR6137
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.81533	67	-	MUWF01	165	7469	7040	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001995	GCA_001994165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/165/GCA_001994165.1_ASM199416v1	-	VC5618
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.56368	50.8	-	FUBJ01	388	5115	4348	1/28/17	2/26/17	Contig	SC	SAMEA1569786	GCA_900159935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/935/GCA_900159935.1_8403_8_23	-	sh1407
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54115	38.3	-	FJKM01	58	3240	3087	2/20/16	3/27/17	Contig	SC	SAMEA1966716	GCA_900052335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/335/GCA_900052335.1_10625_3_19	-	2532STDY5467588
Pseudomonas syringae pv. actinidiae	103796	PRJNA339323	339323	Proteobacteria	Gammaproteobacteria	6.42431	58.5	-	MOMK01	373	6306	5605	12/20/16	3/28/17	Scaffold	New Zealand Institute for Plant and Food Research	SAMN05589877	GCA_001910465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/465/GCA_001910465.1_ASM191046v1	-	Psa NZ-62
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.12235	41.1	-	CEHR01	123	2151	2011	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233946	GCA_000942135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/135/GCA_000942135.1_Velvet_assembly	-	LS7W
Streptococcus agalactiae str. Gottschalk 1002A	1105236	PRJNA86437	86437	Terrabacteria group	Firmicutes	2.07091	35.3	-	ANEY01	25	2118	2017	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991126	GCA_000310405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/405/GCA_000310405.1_ASM31040v1	-	Gottschalk 1002A
Acinetobacter baumannii Canada BC-5	903895	PRJNA53389	53389	Proteobacteria	Gammaproteobacteria	3.99802	39.1895	plasmid pCanadaBC5-8.7:NZ_AFDN01000003.1/AFDN01000003.1	AFDN01	3	3868	3691	8/10/12	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN02436468	GCA_000286615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/286/615/GCA_000286615.1_gacin07v1.0	-	Canada BC-5
Pseudomonas aeruginosa BWHPSA002	1402502	PRJNA219863	219863	Proteobacteria	Gammaproteobacteria	6.9367	66.1	-	AXRA01	11	6603	6416	10/24/13	3/9/17	Scaffold	Broad Institute	SAMN02360674	GCA_000481665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/665/GCA_000481665.1_Pseu_aeru_BWH002_V1	-	BWHPSA002
Leptospira interrogans serovar Hardjo	176	PRJNA361446	361446	Spirochaetes	Spirochaetia	4.77573	35	-	MVAE01	47	4343	3889	2/11/17	4/10/17	Contig	School of Veterinary Medicine and Animal Science / University of Sao Paulo	SAMN06298621	GCA_001995195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/195/GCA_001995195.1_ASM199519v1	-	OV5
Streptococcus pyogenes ABC020048503	1439181	PRJNA233018	233018	Terrabacteria group	Firmicutes	1.8325	38.5	-	JJJQ01	2	1882	1760	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567367	GCA_000628045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/045/GCA_000628045.1_Stre_pyog_ABC020048503_V1	-	ABC020048503
Neisseria meningitidis 2000080	1145122	PRJNA83457	83457	Proteobacteria	Betaproteobacteria	2.15835	51.9	-	APSI01	137	2513	2128	5/1/13	3/21/17	Contig	IGS	SAMN01780072	GCA_000386145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/145/GCA_000386145.2_ASM38614v2	-	2000080
Helicobacter pylori Hp H-44	992049	PRJNA64125	64125	Proteobacteria	delta/epsilon subdivisions	1.66584	39.1	-	AKOP01	16	1631	1478	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778872	GCA_000273925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/925/GCA_000273925.1_ASM27392v1	-	Hp H-44
Streptococcus pneumoniae 8190-05	760867	PRJNA48927	48927	Terrabacteria group	Firmicutes	2.06974	39.9	-	AIJY01	32	2272	1976	3/7/12	3/8/17	Contig	Institute for Genome Sciences	SAMN00691436	GCA_000251985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/985/GCA_000251985.2_ASM25198v2	-	8190-05
Campylobacter jejuni subsp. jejuni 81116	407148	PRJNA17953	17953	Proteobacteria	delta/epsilon subdivisions	1.62811	30.5	chromosome:NC_009839.1/CP000814.1	-	1	1678	1582	9/20/07	3/15/17	Complete Genome	BBSRC Institute of Food Research	SAMN02603008	GCA_000017905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/905/GCA_000017905.1_ASM1790v1	17873037	81116; NCTC 11828
Mycobacterium tuberculosis SUMu007	675518	PRJNA43615	43615	Terrabacteria group	Actinobacteria	4.36436	65.2	-	ADHW01	41	4375	4046	3/3/10	5/18/17	Scaffold	Broad Institute	SAMN02595386	GCA_000177875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/875/GCA_000177875.2_ASM17787v2	-	SUMu007
Bacillus cereus	1396	PRJNA288249	288249	Terrabacteria group	Firmicutes	5.59157	35.2	-	LQZN01	194	5996	5594	2/23/16	3/27/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN03797429	GCA_001566365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/365/GCA_001566365.1_ASM156636v1	27284145	MB.1
Staphylococcus epidermidis	1282	PRJNA319645	319645	Terrabacteria group	Firmicutes	2.45648	32.1	-	LYQC01	50	2452	2318	6/6/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN05173250	GCA_001658565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/565/GCA_001658565.1_ASM165856v1	-	AEEG06
Listeria monocytogenes	1639	PRJNA335730	335730	Terrabacteria group	Firmicutes	3.21869	37.9	-	MCHP01	30	3332	3232	4/21/17	4/24/17	Scaffold	Iowa State University	SAMN05453201	GCA_002103395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/395/GCA_002103395.1_ASM210339v1	-	P02-003
Yersinia pestis 970754	755895	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.34863	48	-	ADPW01	1104	4114	3822	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403018	GCA_000323685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/685/GCA_000323685.1_ASM32368v1	23271803	970754
Campylobacter jejuni subsp. jejuni 2008-831	889255	PRJNA52935	52935	Proteobacteria	delta/epsilon subdivisions	1.60941	30.5	-	AIOV01	120	1697	1605	3/16/12	3/15/17	Contig	Cornell University	SAMN02429048	GCA_000254715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/715/GCA_000254715.2_ASM25471v2	-	2008-831
Orientia tsutsugamushi str. Boryong	357244	PRJNA16180	16180	Proteobacteria	Alphaproteobacteria	2.12705	30.5	chromosome:NC_009488.1/AM494475.1	-	1	2195	1408	5/15/07	3/30/17	Complete Genome	Seoul National University College of Medicine	SAMEA3138266	GCA_000063545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/063/545/GCA_000063545.1_ASM6354v1	17483455	Boryong
Staphylococcus aureus subsp. aureus MRSA131	754025	PRJNA47281	47281	Terrabacteria group	Firmicutes	2.81757	32.6	-	AECR01	39	2938	2832	1/27/11	3/2/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189156	GCA_000187145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/145/GCA_000187145.1_ASM18714v1	-	MRSA131
Staphylococcus aureus subsp. aureus MRSA177	754026	PRJNA47283	47283	Terrabacteria group	Firmicutes	2.82604	32.6	-	AECP01	47	2946	2839	1/27/11	3/2/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189157	GCA_000187165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/165/GCA_000187165.1_ASM18716v1	-	MRSA177
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	192222	PRJNA8	8	Proteobacteria	delta/epsilon subdivisions	1.64148	30.5	chromosome:NC_002163.1/AL111168.1	-	1	1668	1572	9/27/01	8/3/16	Complete Genome	Sanger Institute	SAMEA1705929	GCA_000009085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/085/GCA_000009085.1_ASM908v1	"1,068,820,417,565,660"	NCTC 11168
Campylobacter jejuni subsp. jejuni 1997-4	889222	PRJNA52869	52869	Proteobacteria	delta/epsilon subdivisions	1.67022	30.4	-	AIOW01	129	1752	1656	3/16/12	3/15/17	Contig	Cornell University	SAMN02429049	GCA_000254735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/735/GCA_000254735.2_ASM25473v2	-	1997-4
Yersinia pestis A1956001	755924	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.50853	47.6	-	ADPX01	852	4254	4047	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403019	GCA_000323705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/705/GCA_000323705.1_ASM32370v1	23271803	A1956001
Listeria monocytogenes	1639	PRJNA335730	335730	Terrabacteria group	Firmicutes	3.19331	37.8	-	MCHS01	39	3308	3201	4/21/17	4/24/17	Scaffold	Iowa State University	SAMN05453246	GCA_002103415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/415/GCA_002103415.1_ASM210341v1	-	P04-001
Staphylococcus epidermidis	1282	PRJNA319645	319645	Terrabacteria group	Firmicutes	2.27886	32.3	-	LYQF01	149	2257	2125	6/6/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN05173251	GCA_001658605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/605/GCA_001658605.1_ASM165860v1	-	KEB09
Bacillus cereus	1396	PRJNA288257	288257	Terrabacteria group	Firmicutes	5.62025	35.5	-	LQZM01	266	6080	5720	2/23/16	3/27/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN03797526	GCA_001566375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/375/GCA_001566375.1_ASM156637v1	27284145	MB.15
Mycobacterium tuberculosis SUMu008	675519	PRJNA43617	43617	Terrabacteria group	Actinobacteria	4.37684	65.1	-	ADHX01	41	4406	4052	3/3/10	5/18/17	Scaffold	Broad Institute	SAMN02595387	GCA_000177895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/895/GCA_000177895.2_ASM17789v2	-	SUMu008
Campylobacter jejuni subsp. jejuni IA3902	567106	PRJNA28907	28907	Proteobacteria	delta/epsilon subdivisions	1.67222	30.4955	chromosome:NC_017279.1/CP001876.1; plasmid pVir:NC_017284.1/CP001877.1	-	2	1757	1671	1/29/10	3/15/17	Complete Genome	Iowa State University	SAMN02603425	GCA_000025425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/425/GCA_000025425.1_ASM2542v1	22188995	-
Streptococcus pneumoniae 5652-06	760871	PRJNA48935	48935	Terrabacteria group	Firmicutes	2.08089	39.9	-	AIJU01	13	2262	1995	3/7/12	3/8/17	Contig	Institute for Genome Sciences	SAMN00630315	GCA_000252025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/025/GCA_000252025.2_ASM25202v2	-	5652-06
Helicobacter pylori Hp H-45	992050	PRJNA64127	64127	Proteobacteria	delta/epsilon subdivisions	1.6554	38.9	-	AKOQ01	14	1637	1473	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778904	GCA_000273945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/945/GCA_000273945.1_ASM27394v1	23661595	Hp H-45
Neisseria meningitidis 96060	1145123	PRJNA83459	83459	Proteobacteria	Betaproteobacteria	2.24024	51.9	-	APSJ01	131	2603	2197	5/1/13	3/21/17	Contig	IGS	SAMN01780073	GCA_000386165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/165/GCA_000386165.2_ASM38616v2	-	96060
Streptococcus pyogenes ABC020049545	1439191	PRJNA233019	233019	Terrabacteria group	Firmicutes	1.83134	38.5	-	JJJR01	2	1880	1758	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567368	GCA_000628065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/065/GCA_000628065.1_Stre_pyog_ABC020049545_V1	-	ABC020049545
Leptospira interrogans serovar Australis	211882	PRJNA361446	361446	Spirochaetes	Spirochaetia	4.90713	35.1	-	MVAF01	134	4538	3989	2/11/17	4/10/17	Contig	School of Veterinary Medicine and Animal Science / University of Sao Paulo	SAMN06298624	GCA_001995205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/205/GCA_001995205.1_ASM199520v1	-	SU5
Pseudomonas aeruginosa BWHPSA001	1402501	PRJNA219862	219862	Proteobacteria	Gammaproteobacteria	6.48974	66.2	-	AXRB01	8	6105	5942	10/24/13	3/9/17	Scaffold	Broad Institute	SAMN02360673	GCA_000481685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/685/GCA_000481685.1_Pseu_aeru_BWH001_V1	-	BWHPSA001
Acinetobacter baumannii BZICU-2	1210907	PRJNA170599	170599	Proteobacteria	Gammaproteobacteria	3.81431	38.9	-	ALOH01	184	3619	3473	8/21/12	3/15/17	Contig	Beijing Institute of Disease Control and Prevention	SAMN02469339	GCA_000292545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/545/GCA_000292545.1_ASM29254v1	23045506	BZICU-2
Streptococcus agalactiae FSL S3-251	1154786	PRJNA86163	86163	Terrabacteria group	Firmicutes	2.22845	35.5	-	ANCO01	128	2419	2150	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993328	GCA_000310425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/425/GCA_000310425.1_ASM31042v1	-	FSL S3-251
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.14676	41	-	CEEJ01	177	2130	1994	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233920	GCA_000942215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/215/GCA_000942215.1_Velvet_assembly	-	LS4M
Pseudomonas syringae pv. actinidiae	103796	PRJNA339324	339324	Proteobacteria	Gammaproteobacteria	6.43604	58.6	-	MOML01	499	6213	5543	12/20/16	3/28/17	Scaffold	New Zealand Institute for Plant and Food Research	SAMN05589878	GCA_001910495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/495/GCA_001910495.1_ASM191049v1	-	Psa NZ-63
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.48786	38.3	-	FJAJ01	31	3193	3063	2/20/16	3/27/17	Contig	SC	SAMEA2059853	GCA_900052905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/905/GCA_900052905.1_10771_1_12	-	2531STDY5467293
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.49343	50.8	-	FUBM01	370	5013	4255	1/28/17	2/26/17	Contig	SC	SAMEA1569699	GCA_900159955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/955/GCA_900159955.1_8403_8_25	-	sh1409
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.36047	67	-	MUWH01	170	8000	7527	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001997	GCA_001994195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/195/GCA_001994195.1_ASM199419v1	-	VC6901
Burkholderia pseudomallei PB08298010	1249658	PRJNA179436	179436	Proteobacteria	Betaproteobacteria	7.24147	67.9	-	ARZO01	329	7518	6853	4/25/14	3/24/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02044383	GCA_000648335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/335/GCA_000648335.1_Burkholderia_pseudomallei_assembly	24655932	PB08298010
Bacillus thuringiensis	1428	PRJNA348753	348753	Terrabacteria group	Firmicutes	5.21491	35.1	-	DGCX01	46	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454526	GCA_002385135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/135/GCA_002385135.1_ASM238513v1	28894102	-
Vibrio cholerae HE48	991947	PRJNA63901	63901	Proteobacteria	Gammaproteobacteria	4.17941	47.5	-	AFOR01	18	4033	3707	7/15/11	5/19/17	Contig	Institute for Genome Sciences	SAMN00222980	GCA_000220785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/785/GCA_000220785.2_ASM22078v2	-	HE48
Clostridioides difficile Y171	1151378	PRJNA85931	85931	Terrabacteria group	Firmicutes	3.96123	28.3	-	AVKW01	286	3686	3508	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766738	GCA_000451445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/445/GCA_000451445.2_ASM45144v2	-	Y171
Brucella abortus LMN1	1408184	PRJNA254445	254445	Proteobacteria	Alphaproteobacteria	3.39595	57.4	-	JPHM01	24	3254	2885	8/13/14	3/17/16	Contig	Madurai Kamaraj University	SAMN02904644	GCA_000739335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/335/GCA_000739335.1_ASM73933v1	-	LMN1
Oenococcus oeni ATCC BAA-1163	379360	PRJNA16668	16668	Terrabacteria group	Firmicutes	1.75345	37.9	-	AAUV01	62	1675	1398	11/28/06	1/8/14	Scaffold	Laboratoire de Microbiologie (Universite Bourgogne); GENOME Express; UMR Oenologie Ampelologie (Universite Bordeaux 2)	SAMN02469817	GCA_000168955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/955/GCA_000168955.1_ASM16895v1	-	ATCC BAA-1163
Vibrio parahaemolyticus S069	1394612	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.05312	45.3	-	AWKW01	414	4792	4623	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338926	GCA_000490875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/875/GCA_000490875.1_S069	-	S069
Klebsiella pneumoniae UCI 26	1400177	PRJNA219276	219276	Proteobacteria	Gammaproteobacteria	5.35225	57.5	-	JCMF01	2	5307	5070	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02356606	GCA_000566885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/885/GCA_000566885.1_Kleb_pneu_UCI_26_V1	-	UCI 26
Clostridium botulinum A1 str. CFSAN002368	1302421	PRJNA192665	192665	Terrabacteria group	Firmicutes	3.85019	28	-	AQPU01	238	2599	2570	7/24/13	3/12/14	Contig	FDA	SAMN01940925	GCA_000439635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/635/GCA_000439635.1_CFSAN002368_1.0	24463972	CFSAN002368
Enterococcus faecalis EnGen0234	1158552	PRJNA88823	88823	Terrabacteria group	Firmicutes	3.02121	37.5	-	AJAC01	19	3109	2940	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809101	GCA_000393715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/715/GCA_000393715.1_Ente_faec_UAA1180_V1	-	UAA1180
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14588	52.4	-	CQNI01	76	2510	2192	3/23/15	4/10/17	Contig	SC	SAMEA1690464	GCA_001164185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/185/GCA_001164185.1_8727_8_17	-	GCGS113
Enterococcus faecium EnGen0159	1157454	PRJNA88337	88337	Terrabacteria group	Firmicutes	2.81758	38.1	-	AIUG01	27	2914	2643	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808985	GCA_000395465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/465/GCA_000395465.1_Ente_faec_UAA715_V1	-	UAA715
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.17331	41.2	-	CWBV01	84	2127	1951	6/24/15	3/26/17	Contig	SC	SAMEA1032998	GCA_001178825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/825/GCA_001178825.1_6903_5_74	-	EQUI0123
Campylobacter jejuni subsp. jejuni D42a	1349826	PRJNA209346	209346	Proteobacteria	delta/epsilon subdivisions	1.72397	30.481	chromosome:NZ_CP007751.1/CP007751.1; plasmid pTet-D42a:NZ_CP007752.1/CP007752.1	-	2	1821	1625	11/3/16	4/17/17	Complete Genome	University of Arizona	SAMN02990964	GCA_001865615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/615/GCA_001865615.1_ASM186561v1	-	D42a
Corynebacterium diphtheriae bv. mitis	1806053	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.39607	53.6	-	LSWP01	44	2315	2114	6/20/17	6/22/17	Scaffold	Northumbria University	SAMN04497014	GCA_002202745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/202/745/GCA_002202745.1_S73	-	5005
Lactobacillus plantarum	1590	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.31262	44.3	-	MKDT01	85	3237	3080	2/1/17	3/29/17	Scaffold	ETH Zurich	SAMN05717745	GCA_001982035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/035/GCA_001982035.1_ASM198203v1	-	RI-140
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.27507	60	-	FCIN01	27	5010	4840	1/21/16	3/27/17	Scaffold	SC	SAMEA2273961	GCA_001538345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/345/GCA_001538345.1_12082_2_92	-	2880STDY5682888
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.86384	31.1	-	JOUI01	129	1956	1826	11/10/15	3/18/17	Contig	FDA	SAMN02693044	GCA_001442045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/045/GCA_001442045.1_Campylobacter_coli_CVM_N1636_v1.0	-	CVM N1636
Enterobacter cloacae	550	PRJNA355403	355403	Proteobacteria	Gammaproteobacteria	5.33002	55.1	-	MRAA01	150	5311	5052	1/6/17	3/28/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06076153	GCA_001938425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/425/GCA_001938425.1_ASM193842v1	-	WCHEClY2402
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.2111	64.1	-	FVCQ01	8	5326	5153	3/10/17	3/18/17	Contig	SC	SAMEA2071356	GCA_900131385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/385/GCA_900131385.1_10665_4_1	-	256
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.28125	67.4	-	LPKF01	88	6577	6229	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449612	GCA_001531945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/945/GCA_001531945.1_ASM153194v1	-	MSMB609WGS
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.24928	54.7	-	LPQU01	89	5268	5041	12/21/15	3/27/17	Contig	JCVI	SAMN04252887	GCA_001473285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/285/GCA_001473285.1_SMART_77.v1	-	SMART_77
Pseudomonas sp. NBRC 111135	1661050	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	6.98683	64.5	-	BCBL01	155	6469	6240	10/3/15	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00031670	GCA_001320705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/705/GCA_001320705.1_ASM132070v1	-	NBRC 111135
Streptomyces sp. NRRL S-146	1463884	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.86405	71.2	-	JOAW01	1504	8555	7199	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645377	GCA_000720505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/505/GCA_000720505.1_ASM72050v1	-	NRRL S-146
Bacillus sp. MB366	1663555	PRJNA357173	357173	Terrabacteria group	Firmicutes	5.31815	35.3	-	MRWR01	177	5652	5350	1/9/17	4/16/17	Scaffold	Fatima Jinnah Women University	SAMN06134554	GCA_001940445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/445/GCA_001940445.1_ASM194044v1	-	MB366
Acinetobacter sp. UBA1297	1945925	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.92993	41.7	-	DBUF01	28	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06454402	GCA_002307755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/755/GCA_002307755.1_ASM230775v1	28894102	-
Staphylococcus sp. OJ82	1202667	PRJNA169176	169176	Terrabacteria group	Firmicutes	2.89921	32.9	-	ALPU01	28	2814	2659	8/31/12	4/17/17	Contig	Korea University	SAMN02470207	GCA_000294465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/465/GCA_000294465.1_ASM29446v1	23105083	OJ82
Clostridium sp. UBA3521	1946354	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.63753	30.1	-	DFPG01	58	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06457867	GCA_002377125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/125/GCA_002377125.1_ASM237712v1	28894102	-
Mycobacterium sp. 20-66-4	1970401	PRJNA379596	379596	Terrabacteria group	Actinobacteria	0.381829	65.6	-	NCAF01	288	497	434	8/16/17	8/16/17	Scaffold	None	SAMN06622458	GCA_002255665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/665/GCA_002255665.1_ASM225566v1	-	-
Clostridium sp. UBA4157	1946359	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.62029	29.6	-	DFVP01	147	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454002	GCA_002380005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/005/GCA_002380005.1_ASM238000v1	28894102	-
Staphylococcus sp. E463	1234593	PRJNA175606	175606	Terrabacteria group	Firmicutes	2.48678	31.6	-	ANBY01	118	2409	2248	12/4/12	4/8/17	Contig	San Diego State University	SAMN02470874	GCA_000316945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/945/GCA_000316945.1_E463	-	E463
Acinetobacter sp. UBA1497	1945927	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.72899	42	-	DCRH01	331	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455381	GCA_002324955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/955/GCA_002324955.1_ASM232495v1	28894102	-
Bacillus sp. S1-R5C1-FB	1973491	PRJNA335430	335430	Terrabacteria group	Firmicutes	5.67643	35.6	-	NBNS01	826	5910	5592	5/19/17	6/19/17	Scaffold	NBACC	SAMN05442533	GCA_002151605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/605/GCA_002151605.1_ASM215160v1	-	S1-R5C1-FB
Streptomyces sp. NRRL WC-3742	1463934	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.7447	72.8	-	JOCF01	233	7789	7375	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645412	GCA_000720635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/635/GCA_000720635.1_ASM72063v1	-	NRRL WC-3742
Pseudomonas sp. NBRC 111136	1661051	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	6.55176	61.5	-	BCBM01	202	6140	5866	10/3/15	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00031671	GCA_001320745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/745/GCA_001320745.1_ASM132074v1	-	NBRC 111136
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.05073	55.3	-	LPOC01	76	4992	4761	12/21/15	3/27/17	Contig	JCVI	SAMN04252958	GCA_001475395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/395/GCA_001475395.1_SMART_1139.v1	-	SMART_1139
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.19432	67.4	-	LPHP01	129	6510	6136	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449541	GCA_001532205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/205/GCA_001532205.1_ASM153220v1	-	MSMB2110WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15524	64.1	-	FSAJ01	23	5169	5019	12/14/16	3/21/17	Contig	SC	SAMEA2068679	GCA_900131395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/395/GCA_900131395.1_10665_3_85	-	255
Enterobacter cloacae	550	PRJNA355403	355403	Proteobacteria	Gammaproteobacteria	5.30508	55.1	-	MRAB01	91	5325	5080	1/6/17	3/28/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06076642	GCA_001938435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/435/GCA_001938435.1_ASM193843v1	-	WCHEClY2403
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.75286	31.1	-	JOUK01	78	1813	1697	11/10/15	3/18/17	Contig	FDA	SAMN02693030	GCA_001442095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/095/GCA_001442095.1_Campylobacter_coli_CVM_N18725_v1.0	-	CVM N18725
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.23766	60	-	FCIL01	22	4956	4798	1/21/16	3/27/17	Scaffold	SC	SAMEA2273960	GCA_001538365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/365/GCA_001538365.1_12082_2_91	-	2880STDY5682887
Lactobacillus plantarum	1590	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.38921	44.2	-	MKEA01	76	3344	3083	2/1/17	3/29/17	Scaffold	ETH Zurich	SAMN05717756	GCA_001982115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/115/GCA_001982115.1_ASM198211v1	-	RI-506
Corynebacterium diphtheriae bv. gravis	1720349	PRJNA312301	312301	Terrabacteria group	Actinobacteria	2.39246	53.6	-	LSYN01	63	2302	2087	6/20/17	6/22/17	Scaffold	Northumbria University	SAMN04496957	GCA_002203325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/325/GCA_002203325.1_ASM220332v1	-	209
Campylobacter jejuni subsp. jejuni 00-2544	1383068	PRJNA214465	214465	Proteobacteria	delta/epsilon subdivisions	1.76643	30.4708	chromosome:NC_022353.2/CP006709.2; plasmid unnamed:NC_022354.1/CP006710.1	-	2	1876	1781	9/12/13	3/16/17	Complete Genome	Public Health Agency of Canada	SAMN02603726	GCA_000466075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/075/GCA_000466075.2_ASM46607v2	24641125	00-2544
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12805	41.2	-	CVZA01	80	2072	1876	6/23/15	3/26/17	Contig	SC	SAMEA1032999	GCA_001178845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/845/GCA_001178845.1_6830_4_80	-	EQUI0225
Enterococcus faecium EnGen0160	1157455	PRJNA88339	88339	Terrabacteria group	Firmicutes	2.718	38.2	-	AIUH01	17	2771	2532	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808986	GCA_000395485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/485/GCA_000395485.1_Ente_faec_UAA716_V1	-	UAA716
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14914	52.4	-	CQMR01	78	2525	2203	3/23/15	4/10/17	Contig	SC	SAMEA1690467	GCA_001165845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/845/GCA_001165845.1_8727_8_3	-	GCGS099
Enterococcus faecalis EnGen0235	1158976	PRJNA88831	88831	Terrabacteria group	Firmicutes	3.37502	37.1	-	AJAG01	33	3530	3325	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809105	GCA_000393795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/393/795/GCA_000393795.1_Ente_faec_UAA1489_V1	-	UAA1489
Clostridium botulinum CFSAN002369	1302427	PRJNA192666	192666	Terrabacteria group	Firmicutes	3.64555	28	-	AQPV01	130	2144	2114	7/24/13	3/12/14	Contig	FDA	SAMN01940926	GCA_000439655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/655/GCA_000439655.1_CFSAN002369_1.0	24463972	CFSAN002369
Klebsiella pneumoniae UCI 25	1400176	PRJNA219275	219275	Proteobacteria	Gammaproteobacteria	5.54203	57.2	-	JCMG01	4	5536	5285	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02356605	GCA_000566905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/905/GCA_000566905.1_Kleb_pneu_UCI_25_V1	-	UCI 25
Vibrio parahaemolyticus S068	1394611	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.13312	45.1	-	AWKX01	529	4888	4686	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338925	GCA_000490895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/895/GCA_000490895.1_S068	-	S068
Oenococcus oeni IOEB_9304	1428417	PRJNA229534	229534	Terrabacteria group	Firmicutes	1.82766	37.7	-	AZKI01	137	1808	1570	10/1/14	10/1/14	Contig	Institut des Sciences de la Vigne et du Vin	SAMN02902412	GCA_000761645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/761/645/GCA_000761645.1_Oeoe_IOEB_9304_1.0	24901216	IOEB_9304
Brucella abortus	235	PRJNA284321	284321	Proteobacteria	Alphaproteobacteria	3.27124	57.2	-	LFJE01	25	3185	2821	6/24/15	6/24/15	Contig	Madurai Kamaraj University	SAMN03764498	GCA_001038665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/665/GCA_001038665.1_ASM103866v1	-	S19per_mutant
Clostridioides difficile DA00256	1151355	PRJNA85885	85885	Terrabacteria group	Firmicutes	3.83724	28.5	-	AVKD01	529	3690	3434	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766673	GCA_000451465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/465/GCA_000451465.2_ASM45146v2	-	DA00256
Vibrio cholerae O1 str. Amazonia	1055325	PRJNA68553	68553	Proteobacteria	Gammaproteobacteria	3.92556	47.6	-	AFSV01	63	3687	3481	7/25/11	3/22/17	Contig	Federal University of Rio de Janeiro	SAMN02470783	GCA_000223095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/223/095/GCA_000223095.2_ASM22309v2	21952545	Amazonia
Burkholderia pseudomallei 4900CFPatient1	1321245	PRJNA179436	179436	Proteobacteria	Betaproteobacteria	6.97641	68.2	-	ARZE01	350	7332	6603	4/25/14	3/24/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02044373	GCA_000648355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/355/GCA_000648355.1_Burkholderia_pseudomallei_assembly	24655932	4900CFPatient1
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.34269	67	-	MUWG01	236	7993	7492	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001996	GCA_001994205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/205/GCA_001994205.1_ASM199420v1	-	VC6047
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.5503	50.8	-	FUBW01	404	5113	4349	1/28/17	2/26/17	Contig	SC	SAMEA1569824	GCA_900160065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/065/GCA_900160065.1_8403_8_37	-	sh1421
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.58414	38.2	-	FJAN01	42	3305	3146	2/20/16	3/27/17	Contig	SC	SAMEA2059847	GCA_900052915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/915/GCA_900052915.1_10771_1_3	-	2531STDY5467284
Pseudomonas syringae pv. actinidiae	103796	PRJNA339325	339325	Proteobacteria	Gammaproteobacteria	6.77784	58.2	-	MOMM01	393	6704	6014	12/20/16	3/28/17	Scaffold	New Zealand Institute for Plant and Food Research	SAMN05589879	GCA_001910545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/545/GCA_001910545.1_ASM191054v1	-	Psa NZ-64
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04855	41.1	-	CEDA01	63	2044	1949	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233880	GCA_000942315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/315/GCA_000942315.1_Velvet_assembly	-	LL-Z
Streptococcus agalactiae FSL S3-102	1154798	PRJNA86187	86187	Terrabacteria group	Firmicutes	1.99187	35.3	-	ANCS01	35	2051	1909	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991076	GCA_000310445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/445/GCA_000310445.1_ASM31044v1	-	FSL S3-102
Acinetobacter baumannii IS-143	903911	PRJNA53421	53421	Proteobacteria	Gammaproteobacteria	4.02002	39.3	-	AMGE01	93	3932	3736	9/17/12	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00761239	GCA_000297515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/515/GCA_000297515.1_gacin24v1.0	-	IS-143
Pseudomonas aeruginosa X13273	1402500	PRJNA219861	219861	Proteobacteria	Gammaproteobacteria	7.04343	66	-	AXRC01	15	6797	6610	10/24/13	3/9/17	Scaffold	Broad Institute	SAMN02360672	GCA_000481705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/705/GCA_000481705.1_Pseu_aeru_X13273_V1	-	X13273
Leptospira interrogans serovar Canicola str. Gui44	1433285	PRJNA244716	244716	Spirochaetes	Spirochaetia	4.58964	34.9	-	JMDI01	233	4182	3731	3/29/17	4/10/17	Contig	Shanghai JiaoTong University School of Medicine	SAMN02728107	GCA_002074815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/815/GCA_002074815.1_Gui44	25201075	Gui44
Streptococcus pyogenes ABC020052309	1439211	PRJNA233023	233023	Terrabacteria group	Firmicutes	1.83135	38.5	-	JJJS01	2	1881	1758	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567372	GCA_000628085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/085/GCA_000628085.1_Stre_pyog_ABC020052309_V1	-	ABC020052309
Neisseria meningitidis 94018	1145124	PRJNA83461	83461	Proteobacteria	Betaproteobacteria	2.14557	51.9	-	APSK01	122	2480	2102	5/1/13	3/21/17	Contig	IGS	SAMN01780074	GCA_000386185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/185/GCA_000386185.2_ASM38618v2	-	94018
Helicobacter pylori Hp H-43	992048	PRJNA64123	64123	Proteobacteria	delta/epsilon subdivisions	1.60766	39.1	-	AKOO01	12	1583	1443	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778893	GCA_000273965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/965/GCA_000273965.1_ASM27396v1	23661595	Hp H-43
Streptococcus pneumoniae 7533-05	760872	PRJNA48937	48937	Terrabacteria group	Firmicutes	2.09338	39.9	-	AIJT01	16	2280	1959	3/7/12	3/8/17	Contig	Institute for Genome Sciences	SAMN00630316	GCA_000252045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/045/GCA_000252045.2_ASM25204v2	-	7533-05
Campylobacter jejuni subsp. jejuni S3	718271	PRJNA45947	45947	Proteobacteria	delta/epsilon subdivisions	1.72459	30.4624	chromosome:NC_017281.1/CP001960.1; plasmid pTet:NC_017282.1/CP001961.1	-	2	1840	1720	12/14/10	3/15/17	Complete Genome	"The University of Arizona, Department of Veterinary Science & Microbiology"	SAMN02603954	GCA_000184205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/184/205/GCA_000184205.1_ASM18420v1	21217004	S3
Mycobacterium tuberculosis SUMu009	675520	PRJNA43619	43619	Terrabacteria group	Actinobacteria	4.37566	65.1	-	ADHY01	46	4386	4048	3/3/10	5/18/17	Scaffold	Broad Institute	SAMN02595388	GCA_000177915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/915/GCA_000177915.2_ASM17791v2	-	SUMu009
Bacillus cereus	1396	PRJNA288261	288261	Terrabacteria group	Firmicutes	5.50197	35.4	-	LRAA01	328	6015	5613	2/23/16	3/27/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN03797530	GCA_001566385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/385/GCA_001566385.1_ASM156638v1	27284145	MB.18
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.31158	32.2	-	LXRQ01	95	2327	2218	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04940133	GCA_001658625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/625/GCA_001658625.1_ASM165862v1	-	LRKNS081
Listeria monocytogenes	1639	PRJNA335730	335730	Terrabacteria group	Firmicutes	3.22623	37.9	-	MCHQ01	30	3338	3240	4/21/17	4/24/17	Scaffold	Iowa State University	SAMN05453208	GCA_002103425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/425/GCA_002103425.1_ASM210342v1	-	P02-008
Yersinia pestis A1973001	755874	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.41312	47.6	-	ADPY01	1539	4462	3838	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403020	GCA_000323725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/725/GCA_000323725.1_ASM32372v1	23271803	A1973001
Campylobacter jejuni subsp. jejuni 1997-7	889223	PRJNA52871	52871	Proteobacteria	delta/epsilon subdivisions	1.58976	30.4	-	AIOX01	76	1691	1587	3/16/12	3/15/17	Contig	Cornell University	SAMN02429050	GCA_000254755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/755/GCA_000254755.2_ASM25475v2	-	1997-7
Candidatus Pantoea carbekii	1235990	PRJNA242971	242971	Proteobacteria	Gammaproteobacteria	1.19695	30.459	chromosome:NZ_CP010907.1/CP010907.1; plasmid pBMSBPS1:NZ_CP010908.1/CP010908.1; plasmid pBMSBPS2:NZ_CP010909.1/CP010909.1; plasmid pBMSBPS3:NZ_CP010910.1/CP010910.1; plasmid pBMSBPS4:NZ_CP010911.1/CP010911.1	-	5	876	808	4/13/15	4/10/17	Complete Genome	The Ohio State University	SAMN03371649	GCA_000971765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/765/GCA_000971765.1_ASM97176v1	25587021	US
Staphylococcus aureus subsp. aureus LCT-SA112	1163749	PRJNA104941	104941	Terrabacteria group	Firmicutes	2.79313	32.9	-	AJLP01	6	2842	2676	5/4/12	3/2/17	Scaffold	BGI	SAMN02469359	GCA_000261165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/165/GCA_000261165.1_ASM26116v1	22815443	LCT-SA112
Staphylococcus aureus subsp. aureus CM05	1134842	PRJNA82073	82073	Terrabacteria group	Firmicutes	2.83314	32.7	-	AMAB01	105	2936	2790	8/27/12	3/5/17	Scaffold	Washington University	SAMN02299517	GCA_000294385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/294/385/GCA_000294385.2_ASM29438v2	-	CM05
Campylobacter jejuni subsp. jejuni 81-176	354242	PRJNA16135	16135	Proteobacteria	delta/epsilon subdivisions	1.69905	30.4566	chromosome:NC_008787.1/CP000538.1; plasmid pTet:NC_008790.1/CP000549.1; plasmid pVir:NC_008770.1/CP000550.1	-	3	1774	1661	1/9/07	3/15/17	Complete Genome	TIGR	SAMN02604044	GCA_000015525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/015/525/GCA_000015525.1_ASM1552v1	-	81-176
Campylobacter jejuni subsp. jejuni 1997-10	889224	PRJNA52873	52873	Proteobacteria	delta/epsilon subdivisions	1.78075	30.2	-	AIOY01	193	1893	1735	3/16/12	3/15/17	Contig	Cornell University	SAMN02429013	GCA_000254775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/775/GCA_000254775.2_ASM25477v2	-	1997-10
Yersinia pestis C1975003	755915	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.36548	48.2	-	ADPZ01	1452	4181	3799	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403022	GCA_000323745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/745/GCA_000323745.1_ASM32374v1	23271803	C1975003
Listeria monocytogenes	1639	PRJNA335730	335730	Terrabacteria group	Firmicutes	3.08312	37.9	-	MCHR01	24	3138	3049	4/21/17	4/24/17	Scaffold	Iowa State University	SAMN05453236	GCA_002103435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/435/GCA_002103435.1_ASM210343v1	-	P02-011
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.66855	31.9	-	LXRO01	77	2748	2583	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04940123	GCA_001658635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/635/GCA_001658635.1_ASM165863v1	-	LRKNS079
Bacillus cereus	1396	PRJNA288258	288258	Terrabacteria group	Firmicutes	6.10721	36.7	-	LQZZ01	1328	6195	5742	2/23/16	3/27/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN03797528	GCA_001566435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/435/GCA_001566435.1_ASM156643v1	-	MB.16
Mycobacterium tuberculosis SUMu010	675521	PRJNA43621	43621	Terrabacteria group	Actinobacteria	4.40718	65.1	-	ADHZ01	52	4422	4097	3/3/10	5/18/17	Scaffold	Broad Institute	SAMN02595389	GCA_000177935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/935/GCA_000177935.2_ASM17793v2	-	SUMu010
Campylobacter jejuni subsp. jejuni	32022	PRJNA231221	231221	Proteobacteria	delta/epsilon subdivisions	1.69613	30.4476	chromosome:NZ_CP022079.1/CP022079.1; plasmid unnamed1:NZ_CP022078.1/CP022078.1	-	2	1763	1655	6/27/17	6/29/17	Complete Genome	US Food and Drug Administration 	SAMN04875591	GCA_002209045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/045/GCA_002209045.1_ASM220904v1	-	FDAARGOS_265
Streptococcus pneumoniae 4075-00	760873	PRJNA48939	48939	Terrabacteria group	Firmicutes	2.08487	39.9	-	AIKE01	8	2265	1996	3/7/12	3/8/17	Contig	Institute for Genome Sciences	SAMN00632922	GCA_000252065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/065/GCA_000252065.2_ASM25206v2	-	4075-00
Helicobacter pylori Hp A-6	992052	PRJNA64131	64131	Proteobacteria	delta/epsilon subdivisions	1.65338	39.2	-	AKOR01	12	1621	1456	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778863	GCA_000273985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/985/GCA_000273985.1_ASM27398v1	23661595	Hp A-6
Neisseria meningitidis 75643	1145125	PRJNA83463	83463	Proteobacteria	Betaproteobacteria	2.13593	52	-	APSL01	135	2463	2093	5/1/13	3/21/17	Contig	IGS	SAMN01780075	GCA_000386205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/205/GCA_000386205.2_ASM38620v2	-	75643
Streptococcus pyogenes ABC020052313	1439212	PRJNA233024	233024	Terrabacteria group	Firmicutes	1.83142	38.5	-	JJJT01	2	1881	1758	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567373	GCA_000628105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/105/GCA_000628105.1_Stre_pyog_ABC020052313_V1	-	ABC020052313
Leptospira interrogans	173	PRJNA244718	244718	Spirochaetes	Spirochaetia	4.59642	35	-	JMDJ01	226	4198	3714	3/29/17	4/10/17	Contig	Shanghai JiaoTong University School of Medicine	SAMN02728108	GCA_002074835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/835/GCA_002074835.1_LEP401	25201075	401
Pseudomonas aeruginosa S35004	1402499	PRJNA219860	219860	Proteobacteria	Gammaproteobacteria	7.00298	66	-	AXRD01	9	6604	6405	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360671	GCA_000481725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/725/GCA_000481725.1_Pseu_aeru_S35004_V1	-	S35004
Acinetobacter baumannii IS-116	903912	PRJNA53423	53423	Proteobacteria	Gammaproteobacteria	3.95251	38.9	-	AMGF01	40	3829	3670	9/17/12	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00761231	GCA_000297535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/535/GCA_000297535.1_gacin24v1.0	-	IS-116
Streptococcus agalactiae FSL S3-005	1154804	PRJNA86199	86199	Terrabacteria group	Firmicutes	2.06739	35.3	-	ANCW01	79	2177	2000	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991071	GCA_000310465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/465/GCA_000310465.1_ASM31046v1	-	FSL S3-005
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.22307	41	-	CEKO01	76	2239	2081	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234006	GCA_000942335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/335/GCA_000942335.1_Velvet_assembly	-	S13G
Pseudomonas syringae pv. actinidiae	103796	PRJNA339326	339326	Proteobacteria	Gammaproteobacteria	6.50457	58.4	-	MOMN01	368	6379	5715	12/20/16	3/28/17	Scaffold	New Zealand Institute for Plant and Food Research	SAMN05589881	GCA_001910555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/555/GCA_001910555.1_ASM191055v1	-	Psa NZ-65
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.48839	38.3	-	FJBW01	34	3197	3059	2/20/16	3/27/17	Contig	SC	SAMEA2059983	GCA_900052925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/925/GCA_900052925.1_10771_1_41	-	2531STDY5467322
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.59865	50.7	-	FUCE01	386	5152	4387	1/28/17	2/26/17	Contig	SC	SAMEA1569870	GCA_900160115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/115/GCA_900160115.1_8403_8_42	-	sh1426
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.33812	67	-	MUWI01	170	8007	7502	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001998	GCA_001994215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/215/GCA_001994215.1_ASM199421v1	-	VC6900
Burkholderia pseudomallei MSHR5855	1306421	PRJNA193329	193329	Proteobacteria	Betaproteobacteria	7.28153	68	-	JMMV01	153	7542	6910	6/27/14	3/24/17	Contig	Northern Arizona University	SAMN01983946	GCA_000714875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/875/GCA_000714875.1_MSHR5855_assembly	-	MSHR5855
Vibrio cholerae HC-06A1	991950	PRJNA63907	63907	Proteobacteria	Gammaproteobacteria	4.0282	47.5	-	AGUI01	128	3845	3688	11/4/11	3/22/17	Contig	Institute for Genome Sciences	SAMN00262219	GCA_000234375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/375/GCA_000234375.2_ASM23437v2	-	HC-06A1
Clostridioides difficile Y307	1151386	PRJNA85947	85947	Terrabacteria group	Firmicutes	3.92646	28.2	-	AVLE01	387	3610	3433	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766747	GCA_000451485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/485/GCA_000451485.2_ASM45148v2	-	Y307
Brucella abortus	235	PRJNA339642	339642	Proteobacteria	Alphaproteobacteria	3.26834	57.2	-	MDTX01	57	3162	2793	8/29/16	8/30/16	Contig	Sardarkrushinagar Dantiwada Agricultural University	SAMN05601081	GCA_001715505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/505/GCA_001715505.1_ASM171550v1	-	SKN01
Oenococcus oeni X2L	1335618	PRJNA203385	203385	Terrabacteria group	Firmicutes	1.81322	37.9	-	JROK01	114	1865	1458	10/28/14	1/29/15	Contig	CERELA	SAMN03083847	GCA_000769675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/769/675/GCA_000769675.1_ASM76967v1	25555740	X2L
Vibrio parahaemolyticus S067	1394610	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.0647	45.3	-	AWKY01	513	4829	4625	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338924	GCA_000490915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/915/GCA_000490915.1_S067	-	S067
Klebsiella pneumoniae UCI 22	1400175	PRJNA219272	219272	Proteobacteria	Gammaproteobacteria	5.66008	57.2	-	JCMH01	11	5756	5507	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02356602	GCA_000566925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/925/GCA_000566925.1_Kleb_pneu_UCI_22_V1	-	UCI 22
Clostridium botulinum	1491	PRJNA239370	239370	Terrabacteria group	Firmicutes	3.4447	28.9	-	JFGC01	1093	-	-	7/18/14	6/3/15	Contig	Centers for Disease Control and Prevention	SAMN02664954	GCA_000730865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/865/GCA_000730865.1_ASM73086v1	25031122	CDC66089
Enterococcus faecalis EnGen0237	1158618	PRJNA88863	88863	Terrabacteria group	Firmicutes	3.14517	37.3	-	AJAW01	29	3285	3117	5/3/13	4/10/17	Scaffold	Broad Institute	SAMN00809123	GCA_000394075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/075/GCA_000394075.1_Ente_faec_SF24397_V1	-	SF24397
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.15182	52.4	-	CQOG01	77	2524	2216	3/23/15	4/11/17	Contig	SC	SAMEA1677393	GCA_001166485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/485/GCA_001166485.1_8727_5_70	-	GCGS220
Enterococcus faecium EnGen0161	1157456	PRJNA88341	88341	Terrabacteria group	Firmicutes	2.87627	38.1	-	AIUI01	19	2949	2703	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808987	GCA_000395505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/505/GCA_000395505.1_Ente_faec_UAA718_V1	-	UAA718
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.17283	41.2	-	CWCF01	94	2133	1950	6/23/15	3/26/17	Contig	SC	SAMEA1033001	GCA_001178865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/865/GCA_001178865.1_6903_5_75	-	EQUI0124
Campylobacter pinnipediorum subsp. pinnipediorum	1660067	PRJNA284982	284982	Proteobacteria	delta/epsilon subdivisions	1.78266	30.4	chromosome:NZ_CP012546.1/CP012546.1	-	1	1803	1711	3/6/17	3/8/17	Complete Genome	"USDA, ARS, WRRC"	SAMN03737982	GCA_002021925.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/925/GCA_002021925.1_ASM202192v1	-	RM17260
Corynebacterium diphtheriae	1717	PRJNA357971	357971	Terrabacteria group	Actinobacteria	2.772	51.5	-	MSBT01	776	2757	2363	1/4/17	1/4/17	Contig	"CMC, Vellore"	SAMN06163067	GCA_001935895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/935/895/GCA_001935895.1_ASM193589v1	-	CMCTH1443
Lactobacillus plantarum	1590	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.47374	44.2	-	MKDY01	71	3410	3187	2/1/17	3/29/17	Scaffold	ETH Zurich	SAMN05717753	GCA_001982125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/125/GCA_001982125.1_ASM198212v1	-	RI-266
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.04861	60	-	FCMC01	16	4810	4655	1/21/16	3/27/17	Scaffold	SC	SAMEA2273908	GCA_001538385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/385/GCA_001538385.1_12082_5_30	-	2880STDY5682835
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.72531	31.3	-	JOUO01	43	1799	1699	11/10/15	3/18/17	Contig	FDA	SAMN02693040	GCA_001442175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/175/GCA_001442175.1_Campylobacter_coli_CVM_N26697_v1.0	-	CVM N26697
Enterobacter cloacae	550	PRJNA355403	355403	Proteobacteria	Gammaproteobacteria	5.29936	55.1	-	MTSN01	98	5316	5072	2/5/17	3/29/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06240355	GCA_001984805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/805/GCA_001984805.1_ASM198480v1	26248381	WCHECl-14653
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.90654	64.1	-	FVCT01	7	4910	4792	3/10/17	3/18/17	Contig	SC	SAMEA2071361	GCA_900131405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/405/GCA_900131405.1_10665_4_19	-	274
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.45082	67.2	-	LPHQ01	130	6729	6346	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449542	GCA_001532215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/215/GCA_001532215.1_ASM153221v1	-	MSMB2111WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.17751	55	-	LPOD01	64	5091	4873	12/21/15	3/27/17	Contig	JCVI	SAMN04252957	GCA_001475405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/405/GCA_001475405.1_SMART_1118.v1	-	SMART_1118
Pseudomonas sp. NBRC 111137	1661052	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	6.71386	59.8	-	BCBN01	125	6302	6045	10/3/15	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00031672	GCA_001320785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/785/GCA_001320785.1_ASM132078v1	-	NBRC 111137
Streptomyces sp. NRRL S-378	1463904	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.16097	72.1	-	JOBX01	252	7575	7071	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645404	GCA_000720645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/645/GCA_000720645.1_ASM72064v1	-	NRRL S-378
Bacillus sp. S2-R3J1-FB-BA1	1973490	PRJNA335430	335430	Terrabacteria group	Firmicutes	5.38147	35.4	-	NBNR01	388	5740	5442	5/19/17	6/19/17	Scaffold	NBACC	SAMN05442534	GCA_002151615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/615/GCA_002151615.1_ASM215161v1	-	S2-R3J1-FB-BA1
Acinetobacter sp. UBA1496	1945926	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.12469	42.2	-	DCRI01	120	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455382	GCA_002324975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/975/GCA_002324975.1_ASM232497v1	28894102	-
Staphylococcus sp. EGD-HP3	1357269	PRJNA211616	211616	Terrabacteria group	Firmicutes	2.57698	33.5	-	AVOQ01	55	2461	2388	9/3/13	4/11/17	Contig	National Environmental Engineering Research Institute-CSIR	SAMN02469680	GCA_000463545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/545/GCA_000463545.2_GS_De_Novo_Assembly	-	EGD-HP3
Clostridium sp. UBA4108	1946358	PRJNA348753	348753	Terrabacteria group	Firmicutes	4.74258	30.3	-	DFXM01	54	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452936	GCA_002381695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/695/GCA_002381695.1_ASM238169v1	28894102	-
Clostridium sp. UBA3947	1946357	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.0212	34	-	DGDR01	247	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457052	GCA_002385545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/385/545/GCA_002385545.1_ASM238554v1	28894102	-
Staphylococcus sp. LCT-H4	1914308	PRJNA350362	350362	Terrabacteria group	Firmicutes	2.7827	32.8	-	MODY01	22	2630	2580	11/3/16	4/13/17	Contig	"Chinese PLA General Hospital, Chinese PLA Postgraduate Medical School"	SAMN05938538	GCA_001866145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/145/GCA_001866145.1_ASM186614v1	-	LCT-H4
Acinetobacter sp. UBA2069	1945929	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.33795	42.1	-	DDAB01	17	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457248	GCA_002332475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/475/GCA_002332475.1_ASM233247v1	28894102	-
Bacillus sp. S1-R2T1-FB	1973493	PRJNA335430	335430	Terrabacteria group	Firmicutes	5.52987	35.6	-	NBNU01	702	5779	5481	5/19/17	6/19/17	Scaffold	NBACC	SAMN05442531	GCA_002151625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/625/GCA_002151625.1_ASM215162v1	-	S1-R2T1-FB
Streptomyces sp. NRRL WC-3795	1463938	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.61202	72.6	-	JOCG01	130	6894	6575	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645413	GCA_000720675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/675/GCA_000720675.1_ASM72067v1	-	NRRL WC-3795
Pseudomonas sp. NBRC 111138	1661053	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	6.06288	60	-	BCBO01	195	5678	5401	10/3/15	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00031673	GCA_001320835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/835/GCA_001320835.1_ASM132083v1	-	NBRC 111138
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.15162	54.7	-	LPOF01	93	5129	4883	12/21/15	3/27/17	Contig	JCVI	SAMN04252955	GCA_001475415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/415/GCA_001475415.1_SMART_1112.v1	-	SMART_1112
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.85143	67.1	-	LPHX01	390	7247	6631	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449549	GCA_001532265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/265/GCA_001532265.1_ASM153226v1	-	MSMB2120WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.25507	64.1	-	FSAK01	24	5350	5169	12/14/16	3/21/17	Contig	SC	SAMEA1973540	GCA_900131415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/415/GCA_900131415.1_10665_4_3	-	258
Enterobacter cloacae	550	PRJNA341407	341407	Proteobacteria	Gammaproteobacteria	5.45617	54.6	-	MTFV01	158	5494	5216	2/13/17	2/22/17	Scaffold	California Department of Public Health	SAMN05721771	GCA_001997105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/105/GCA_001997105.1_ASM199710v1	-	ATCC 13047
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.80445	31	-	JOVY01	86	1883	1748	11/10/15	3/18/17	Contig	FDA	SAMN02693023	GCA_001442195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/195/GCA_001442195.1_Campylobacter_coli_CVM_N287-R_v1.0	-	CVM N287
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.00773	60.2	-	FCKU01	18	4725	4573	1/21/16	3/27/17	Scaffold	SC	SAMEA2274040	GCA_001538405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/405/GCA_001538405.1_12082_3_65	-	2880STDY5682968
Lactobacillus plantarum	1590	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.53417	44.1	-	MKEB01	126	3490	3267	2/1/17	3/29/17	Scaffold	ETH Zurich	SAMN05717757	GCA_001982165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/165/GCA_001982165.1_ASM198216v1	-	RI-507
Corynebacterium diphtheriae	1717	PRJNA357968	357968	Terrabacteria group	Actinobacteria	2.72507	53.7	-	MSBS01	289	2844	2377	1/4/17	1/4/17	Contig	"CMC, Vellore"	SAMN06163065	GCA_001935945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/935/945/GCA_001935945.1_ASM193594v1	-	CMCNS703
Campylobacter pinnipediorum subsp. pinnipediorum	1660067	PRJNA284983	284983	Proteobacteria	delta/epsilon subdivisions	1.74411	30.4	chromosome:NZ_CP012547.1/CP012547.1	-	1	1765	1674	3/6/17	3/8/17	Complete Genome	"USDA, ARS, WRRC"	SAMN03737983	GCA_002021945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/945/GCA_002021945.1_ASM202194v1	-	RM17261
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12648	41.2	-	CWCR01	78	2044	1875	6/23/15	3/26/17	Contig	SC	SAMEA1033002	GCA_001178885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/885/GCA_001178885.1_6903_6_14	-	EQUI0159
Enterococcus faecium EnGen0162	1157457	PRJNA88343	88343	Terrabacteria group	Firmicutes	2.80897	38.1	-	AIUJ01	26	2907	2657	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808988	GCA_000395525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/525/GCA_000395525.1_Ente_faec_UAA719_V1	-	UAA719
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14478	52.4	-	CQKS01	74	2497	2178	3/23/15	4/11/17	Contig	SC	SAMEA1690439	GCA_001167005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/005/GCA_001167005.1_8727_8_61	-	GCGS157
Enterococcus faecalis EnGen0238	1158619	PRJNA88865	88865	Terrabacteria group	Firmicutes	3.19631	37.5	-	AJAX01	27	3320	3170	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809124	GCA_000394095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/095/GCA_000394095.1_Ente_faec_SF24413_V1	-	SF24413
Clostridium botulinum	1491	PRJNA239370	239370	Terrabacteria group	Firmicutes	3.55786	28.9	-	JFGB01	1079	-	-	7/18/14	6/3/15	Contig	Centers for Disease Control and Prevention	SAMN02664955	GCA_000730945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/945/GCA_000730945.1_ASM73094v1	25031122	CDC67187
Klebsiella pneumoniae UCI 21	1400174	PRJNA219271	219271	Proteobacteria	Gammaproteobacteria	5.32243	57.3	-	JCMI01	4	5358	5133	2/6/14	2/20/17	Scaffold	Broad Institute	SAMN02356601	GCA_000566945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/945/GCA_000566945.1_Kleb_pneu_UCI_21_V1	-	UCI 21
Vibrio parahaemolyticus S066	1394609	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.05788	45.3	-	AWKZ01	626	4854	4591	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338923	GCA_000490935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/935/GCA_000490935.1_S066	-	S066
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.54909	38.1	-	MLOT01	1163	2439	2107	11/7/16	11/7/16	Contig	Australian Wine Research Institute	SAMN04297111	GCA_001869135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/869/135/GCA_001869135.1_ASM186913v1	27118061	AWRIB714
Clostridioides difficile Y343	1151388	PRJNA85951	85951	Terrabacteria group	Firmicutes	4.03757	28.3	-	AVLG01	49	3747	3605	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766763	GCA_000451505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/505/GCA_000451505.2_ASM45150v2	-	Y343
Vibrio cholerae HC-23A1	991933	PRJNA63873	63873	Proteobacteria	Gammaproteobacteria	4.09919	47.5	-	AGUM01	15	3924	3708	11/4/11	3/22/17	Contig	Institute for Genome Sciences	SAMN00222984	GCA_000234395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/395/GCA_000234395.2_ASM23439v2	-	HC-23A1
Burkholderia pseudomallei MSHR7504	1435373	PRJNA231175	231175	Proteobacteria	Betaproteobacteria	7.08646	68.3	-	JPWR01	152	7381	6778	11/7/14	3/25/17	Contig	Los Alamos National Laboratory	SAMN02953899	GCA_000773075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/075/GCA_000773075.1_BCW_39	25676747	MSHR7504
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.13199	67	-	MUWK01	147	7789	7330	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05002000	GCA_001994255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/255/GCA_001994255.1_ASM199425v1	-	VC7777
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.73001	50.5	-	FUCM01	394	5283	4514	1/28/17	2/26/17	Contig	SC	SAMEA1569967	GCA_900160205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/205/GCA_900160205.1_8403_8_51	-	sh1435
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.44624	38.3	-	FJCY01	36	3146	2996	2/20/16	3/27/17	Contig	SC	SAMEA2065577	GCA_900052935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/935/GCA_900052935.1_10771_3_15	-	2531STDY5467392
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.12674	58.5	-	MTYL01	310	5980	5404	4/27/17	5/3/17	Scaffold	Massey University	SAMN06197068	GCA_002111665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/665/GCA_002111665.1_ASM211166v1	28369338	C67
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.17685	41	-	CEEK01	159	2169	2003	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233928	GCA_000942375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/375/GCA_000942375.1_Velvet_assembly	-	LS5Q
Streptococcus agalactiae CCUG 29782	1105256	PRJNA86219	86219	Terrabacteria group	Firmicutes	2.11286	35.3	-	ANDC01	24	2168	2086	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991062	GCA_000310485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/485/GCA_000310485.1_ASM31048v1	-	CCUG 29782
Acinetobacter baumannii WC-692	903913	PRJNA53425	53425	Proteobacteria	Gammaproteobacteria	4.18345	38.9	-	AMGG01	79	4114	3881	9/17/12	5/18/17	Contig	Walter Reed Army Institute of Research	SAMN00761214	GCA_000297575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/575/GCA_000297575.1_gacin25v1.0	-	WC-692
Pseudomonas aeruginosa 6077	1402498	PRJNA219859	219859	Proteobacteria	Gammaproteobacteria	7.00059	65.9	-	AXRE01	13	6705	6498	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360670	GCA_000481745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/745/GCA_000481745.1_Pseu_aeru_6077_V1	-	6077
Leptospira interrogans serovar Lai	57678	PRJNA299823	299823	Spirochaetes	Spirochaetia	4.40381	34.9	-	LMAQ01	591	4011	3589	3/31/17	4/10/17	Contig	CORPOICA	SAMN04216083	GCA_002076815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/815/GCA_002076815.1_ASM207681v1	-	Col-P036
Streptococcus pyogenes ABC020052980	1439224	PRJNA233026	233026	Terrabacteria group	Firmicutes	1.83135	38.5	-	JJJU01	2	1881	1758	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567375	GCA_000628125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/125/GCA_000628125.1_Stre_pyog_ABC020052980_V1	-	ABC020052980
Neisseria meningitidis 75689	1145126	PRJNA83465	83465	Proteobacteria	Betaproteobacteria	2.19477	51.9	-	APSM01	132	2544	2148	5/1/13	3/21/17	Contig	IGS	SAMN01780076	GCA_000386225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/225/GCA_000386225.2_ASM38622v2	-	75689
Helicobacter pylori Hp A-14	992054	PRJNA64135	64135	Proteobacteria	delta/epsilon subdivisions	1.5946	39	-	AKOT01	7	1559	1418	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778856	GCA_000274005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/005/GCA_000274005.2_ASM27400v2	23661595	Hp A-14
Streptococcus pneumoniae EU-NP02	760878	PRJNA48949	48949	Terrabacteria group	Firmicutes	2.11031	39.8	-	AIKF01	13	2285	2024	3/7/12	3/8/17	Contig	Institute for Genome Sciences	SAMN00632921	GCA_000252085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/085/GCA_000252085.2_ASM25208v2	-	EU-NP02
Campylobacter pinnipediorum subsp. caledonicus	1874362	PRJNA284985	284985	Proteobacteria	delta/epsilon subdivisions	1.70543	30.4	chromosome:NZ_CP017018.1/CP017018.1	-	1	1695	1615	3/6/17	7/24/17	Complete Genome	"USDA, ARS, WRRC"	SAMN03737985	GCA_002021985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/985/GCA_002021985.1_ASM202198v1	28629508	RM18020
Mycobacterium tuberculosis SUMu011	675522	PRJNA43623	43623	Terrabacteria group	Actinobacteria	4.41797	65	-	ADIA01	56	4426	4040	3/3/10	5/18/17	Scaffold	Broad Institute	SAMN02595390	GCA_000177955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/955/GCA_000177955.2_ASM17795v2	-	SUMu011
Bacillus cereus	1396	PRJNA288260	288260	Terrabacteria group	Firmicutes	5.49274	35.4	-	LQZL01	200	5965	5592	2/23/16	3/27/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN03797529	GCA_001566445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/445/GCA_001566445.1_ASM156644v1	27284145	MB.17
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.67808	31.9	-	LXRR01	111	2747	2575	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04940134	GCA_001658645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/645/GCA_001658645.1_ASM165864v1	-	LRKNS082
Listeria monocytogenes	1639	PRJNA335730	335730	Terrabacteria group	Firmicutes	3.10293	37.8	-	MCHT01	31	3172	3083	4/21/17	4/24/17	Scaffold	Iowa State University	SAMN05453269	GCA_002103475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/475/GCA_002103475.1_ASM210347v1	-	Ro10
Yersinia pestis C1976001	755883	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.54669	47.5	-	ADQA01	979	4403	4065	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403023	GCA_000323765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/765/GCA_000323765.1_ASM32376v1	23271803	C1976001
Campylobacter jejuni subsp. jejuni 1997-11	889225	PRJNA52875	52875	Proteobacteria	delta/epsilon subdivisions	1.60176	30.5	-	AIOZ01	115	1680	1584	3/16/12	3/15/17	Contig	Cornell University	SAMN02429014	GCA_000254795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/795/GCA_000254795.2_ASM25479v2	-	1997-11
Campylobacter jejuni	197	PRJNA233954	233954	Proteobacteria	delta/epsilon subdivisions	1.66996	30.4	chromosome:NZ_CP007191.1/CP007191.1	-	1	1732	1633	1/13/17	3/22/17	Complete Genome	University of Nottingham	SAMN02630633	GCA_001951295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/295/GCA_001951295.1_ASM195129v1	-	NS4-1-1
Staphylococcus aureus HI010	1156995	PRJNA88547	88547	Terrabacteria group	Firmicutes	2.90376	32.7	-	AIVH01	4	3063	2903	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792137	GCA_000359765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/765/GCA_000359765.1_Stap_aure_HI010_V1	-	HI010
Staphylococcus aureus HI013	1157003	PRJNA88563	88563	Terrabacteria group	Firmicutes	2.94633	32.7	-	AIVP01	5	3128	2964	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792127	GCA_000359785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/785/GCA_000359785.1_Stap_aure_HI013_V1	-	HI013
Campylobacter jejuni	197	PRJNA233954	233954	Proteobacteria	delta/epsilon subdivisions	1.67533	30.4	chromosome:NZ_CP007192.1/CP007192.1	-	1	1736	1635	1/13/17	3/21/17	Complete Genome	University of Nottingham	SAMN02630634	GCA_001951315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/315/GCA_001951315.1_ASM195131v1	-	NS4-5-1
Campylobacter jejuni subsp. jejuni 1997-14	889226	PRJNA52877	52877	Proteobacteria	delta/epsilon subdivisions	1.76694	30.3	-	AIPA01	196	1887	1747	3/16/12	3/15/17	Contig	Cornell University	SAMN02429015	GCA_000254815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/815/GCA_000254815.2_ASM25481v2	-	1997-14
Yersinia pestis C1989001	755891	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.58873	47.6	-	ADQB01	934	4414	4116	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403024	GCA_000323785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/785/GCA_000323785.1_ASM32378v1	23271803	C1989001
Listeria monocytogenes	1639	PRJNA335730	335730	Terrabacteria group	Firmicutes	3.14005	37.9	-	MCHU01	28	3215	3125	4/21/17	4/24/17	Scaffold	Iowa State University	SAMN05453270	GCA_002103485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/485/GCA_002103485.1_ASM210348v1	-	Ro11
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.71826	31.8	-	LXRT01	79	2788	2618	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04942501	GCA_001658705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/705/GCA_001658705.1_ASM165870v1	-	LRKNS073
Bacillus cereus	1396	PRJNA288264	288264	Terrabacteria group	Firmicutes	5.5544	35.5	-	LQZW01	359	6073	5668	2/23/16	3/27/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN03797533	GCA_001566455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/455/GCA_001566455.1_ASM156645v1	27284145	MB.21
Mycobacterium tuberculosis CDC1551A	911237	PRJNA59573	59573	Terrabacteria group	Actinobacteria	4.38021	65.2	-	AELF01	53	4384	4094	2/23/11	5/18/17	Scaffold	Broad Institute	SAMN02596696	GCA_000190335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/335/GCA_000190335.1_MT_CDC1551A_V1	-	CDC1551A
Lutibacter sp. LPB0138	1850246	PRJNA341557	341557	FCB group	Bacteroidetes/Chlorobi group	3.42612	30.4	chromosome:NZ_CP017478.1/CP017478.1	-	1	3111	2987	10/12/16	4/13/17	Complete Genome	Korea University	SAMN05726020	GCA_001761325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/325/GCA_001761325.1_ASM176132v1	-	LPB0138
Streptococcus pneumoniae EU-NP03	760879	PRJNA48951	48951	Terrabacteria group	Firmicutes	2.11137	39.7	-	AIKG01	10	2319	2043	3/7/12	3/8/17	Contig	Institute for Genome Sciences	SAMN00632911	GCA_000252105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/105/GCA_000252105.2_ASM25210v2	-	EU-NP03
Helicobacter pylori Hp A-26	992056	PRJNA64139	64139	Proteobacteria	delta/epsilon subdivisions	1.62419	39	-	AKOV01	9	1606	1438	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778866	GCA_000274025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/025/GCA_000274025.1_ASM27402v1	23661595	Hp A-26
Neisseria meningitidis 69100	1145127	PRJNA83467	83467	Proteobacteria	Betaproteobacteria	2.21163	51.8	-	APSN01	133	2569	2167	5/1/13	3/21/17	Contig	IGS	SAMN01780077	GCA_000386245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/245/GCA_000386245.2_ASM38624v2	-	69100
Streptococcus pyogenes ABC020056765	1439268	PRJNA233032	233032	Terrabacteria group	Firmicutes	1.83352	38.5	-	JJJV01	2	1879	1754	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567381	GCA_000628145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/145/GCA_000628145.1_Stre_pyog_ABC020056765_V1	-	ABC020056765
Pseudomonas aeruginosa 19660	1402497	PRJNA219858	219858	Proteobacteria	Gammaproteobacteria	6.75233	66.2	-	AXRF01	11	6440	6238	10/24/13	3/9/17	Scaffold	Broad Institute	SAMN02360669	GCA_000481765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/765/GCA_000481765.1_Pseu_aeru_19660_V1	-	19660
Acinetobacter baumannii IS-58	903914	PRJNA53427	53427	Proteobacteria	Gammaproteobacteria	4.06389	39	-	AMGH01	61	3997	3819	9/17/12	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00761215	GCA_000297595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/595/GCA_000297595.1_gacin26v1.0	-	IS-58
Streptococcus agalactiae CCUG 44074	1105262	PRJNA86245	86245	Terrabacteria group	Firmicutes	2.02954	35.2	-	ANDI01	23	2089	1984	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991102	GCA_000310505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/505/GCA_000310505.1_ASM31050v1	-	CCUG 44074
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.09301	41.1	-	CECZ01	151	2121	1969	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233878	GCA_000942515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/515/GCA_000942515.1_Velvet_assembly	-	LL-X
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.15982	58.5	-	MTYK01	333	5906	5386	4/27/17	5/3/17	Scaffold	Massey University	SAMN06197067	GCA_002111675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/675/GCA_002111675.1_ASM211167v1	28369338	C66
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.53899	38.3	-	FJIL01	62	3236	3087	2/20/16	3/27/17	Contig	SC	SAMEA2077784	GCA_900052945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/945/GCA_900052945.1_10625_2_87	-	2532STDY5467560
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.60696	50.8	-	FUCO01	371	5177	4412	1/28/17	2/26/17	Contig	SC	SAMEA1569988	GCA_900160225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/225/GCA_900160225.1_8403_8_53	-	sh1437
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.64306	67	-	MUWJ01	195	8258	7755	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001999	GCA_001994265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/265/GCA_001994265.1_ASM199426v1	-	VC7526
Burkholderia pseudomallei MSHR5608	1434931	PRJNA230989	230989	Proteobacteria	Betaproteobacteria	7.13222	68.1	-	JPWQ01	174	7471	6818	11/7/14	3/25/17	Contig	Los Alamos National Laboratory	SAMN02953917	GCA_000773085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/085/GCA_000773085.1_BCW_33	25676747	MSHR5608
Vibrio cholerae HC-28A1	991955	PRJNA63917	63917	Proteobacteria	Gammaproteobacteria	4.02764	47.5	-	AGUN01	138	3831	3686	11/4/11	3/22/17	Contig	Institute for Genome Sciences	SAMN00262252	GCA_000234415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/415/GCA_000234415.2_ASM23441v2	-	HC-28A1
Clostridioides difficile Y358	1151389	PRJNA85953	85953	Terrabacteria group	Firmicutes	4.15268	28.8	-	AVLH01	87	3869	3693	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766764	GCA_000451525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/525/GCA_000451525.2_ASM45152v2	-	Y358
Oenococcus oeni	1247	PRJNA304199	304199	Terrabacteria group	Firmicutes	2.05142	38	-	MLPU01	794	2172	1794	11/7/16	11/7/16	Contig	Australian Wine Research Institute	SAMN04297140	GCA_001870005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/005/GCA_001870005.1_ASM187000v1	27118061	AWRIB899
Vibrio parahaemolyticus S065	1394608	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.0587	45.3	-	AWLA01	509	4792	4624	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338922	GCA_000490955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/955/GCA_000490955.1_S065	-	S065
Klebsiella pneumoniae UCI 20	1400173	PRJNA219270	219270	Proteobacteria	Gammaproteobacteria	5.53662	57.3	-	JCMJ01	11	5565	5275	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02356600	GCA_000566965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/965/GCA_000566965.1_Kleb_pneu_UCI_20_V1	-	UCI 20
Clostridium botulinum	1491	PRJNA266242	266242	Terrabacteria group	Firmicutes	3.86488	28.2	-	LAGI01	962	-	-	3/27/15	3/27/15	Contig	Centers for Disease Control and Prevention	SAMN03169470	GCA_000965325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/325/GCA_000965325.1_ASM96532v1	-	CDC41370
Enterococcus faecalis EnGen0239	1158620	PRJNA88867	88867	Terrabacteria group	Firmicutes	3.2006	37.6	-	AJAY01	13	3359	3188	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809125	GCA_000394115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/115/GCA_000394115.1_Ente_faec_SF26630_V1	-	SF26630
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.14601	52.4	-	CQIK01	69	2517	2195	3/22/15	4/10/17	Contig	SC	SAMEA1677445	GCA_001167285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/285/GCA_001167285.1_8727_5_85	-	GCGS235
Enterococcus faecium EnGen0163	1157458	PRJNA88345	88345	Terrabacteria group	Firmicutes	2.9088	38.2	-	AIUK01	26	2946	2749	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808989	GCA_000395545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/545/GCA_000395545.1_Ente_faec_UAA720_V1	-	UAA720
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15993	41.2	-	CVXS01	92	2093	1916	6/24/15	3/26/17	Contig	SC	SAMEA1033003	GCA_001178905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/905/GCA_001178905.1_6817_2_83	-	EQUI0036
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.63383	30.4	chromosome:NZ_CP010473.1/CP010473.1	-	1	1727	1580	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246049	GCA_001506225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/225/GCA_001506225.1_ASM150622v1	-	CJ677CC534
Lactobacillus plantarum	1590	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.33392	44.2	-	MKEE01	105	3299	3088	2/1/17	3/29/17	Scaffold	ETH Zurich	SAMN05717761	GCA_001982205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/205/GCA_001982205.1_ASM198220v1	-	RI-511
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.00939	60.1	-	FCHV01	12	4757	4596	1/21/16	3/27/17	Scaffold	SC	SAMEA2273941	GCA_001538425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/425/GCA_001538425.1_12082_2_74	-	2880STDY5682868
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.84488	31.1	-	JOUS01	138	1934	1818	11/10/15	3/18/17	Contig	FDA	SAMN02693032	GCA_001442235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/235/GCA_001442235.1_Campylobacter_coli_CVM_N3508_v1.0	-	CVM N3508
Enterobacter cloacae	550	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.80012	55.4	-	NCRW01	3	4663	4449	4/12/17	4/16/17	Scaffold	Broad Institute	SAMN04606413	GCA_002087625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/625/GCA_002087625.1_ASM208762v1	-	OS_04_026_-1
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21181	64.1	-	FVDM01	6	5325	5152	3/10/17	3/18/17	Contig	SC	SAMEA2070551	GCA_900131425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/425/GCA_900131425.1_10665_4_2	-	257
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.07562	67.5	-	LPIA01	99	6390	6060	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449552	GCA_001532275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/275/GCA_001532275.1_ASM153227v1	-	MSMB2123WGS
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.19681	54.7	-	LPOG01	68	5182	4958	12/21/15	3/27/17	Contig	JCVI	SAMN04252954	GCA_001475425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/425/GCA_001475425.1_SMART_1109.v1	-	SMART_1109
Pseudomonas sp. NBRC 111140	1661055	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	6.30306	62.1	-	BCBQ01	206	5891	5584	10/3/15	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00031675	GCA_001320885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/885/GCA_001320885.1_ASM132088v1	-	NBRC 111140
Streptomyces sp. NRRL S-646	1463917	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.6972	70.2	-	JODC01	163	9665	8977	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645435	GCA_000720765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/765/GCA_000720765.1_ASM72076v1	-	NRRL S-646
Bacillus sp. S1-R4H1-FB	1973492	PRJNA335430	335430	Terrabacteria group	Firmicutes	5.28608	35.4	-	NBNT01	329	5738	5394	5/19/17	6/19/17	Scaffold	NBACC	SAMN05442532	GCA_002151665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/665/GCA_002151665.1_ASM215166v1	-	S1-R4H1-FB
Acinetobacter sp. UBA2063	1945928	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.43057	41.8	-	DDAH01	273	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06457246	GCA_002333245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/245/GCA_002333245.1_ASM233324v1	28894102	-
Staphylococcus sp. 47.1	1929484	PRJNA355562	355562	Terrabacteria group	Firmicutes	2.8112	32.5	-	MSFG01	60	2716	2612	12/24/16	4/16/17	Contig	Universidade Federal da Bahia	SAMN06077117	GCA_001921675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/921/675/GCA_001921675.1_47.1	-	47.1
Clostridium sp. UBA4606	1946363	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.55588	29.8	-	DGJC01	238	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454885	GCA_002387445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/445/GCA_002387445.1_ASM238744v1	28894102	-
Clostridium sp. UBA4601	1946362	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.85757	29.9	-	DGJH01	152	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454882	GCA_002387455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/455/GCA_002387455.1_ASM238745v1	28894102	-
Staphylococcus sp. NFPP34	1566296	PRJEB16878	351005	Terrabacteria group	Firmicutes	2.21944	31.3	-	FOBP01	34	2217	2096	10/29/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN03159421	GCA_900109865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/865/GCA_900109865.1_IMG-taxon_2599185353_annotated_assembly	-	NFPP34
Bacillus sp. S1-R1J2-FB	1973494	PRJNA335430	335430	Terrabacteria group	Firmicutes	5.45515	35.4	-	NBNV01	543	5757	5450	5/19/17	5/24/17	Scaffold	NBACC	SAMN05442530	GCA_002151675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/675/GCA_002151675.1_ASM215167v1	-	S1-R1J2-FB
Streptomyces sp. NRRL S-515	1463913	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.68213	71.8	-	JODE01	129	7901	7488	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645437	GCA_000720795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/795/GCA_000720795.1_ASM72079v1	-	NRRL S-515
Pseudomonas sp. NBRC 111142	1661057	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	6.32546	62.8	-	BCBS01	329	5946	5592	10/3/15	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00031677	GCA_001320925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/925/GCA_001320925.1_ASM132092v1	-	NBRC 111142
Enterobacter hormaechei	158836	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.01664	55	-	LPOH01	39	4964	4667	12/21/15	3/27/17	Contig	JCVI	SAMN04252953	GCA_001475475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/475/GCA_001475475.1_SMART_1105.v1	-	SMART_1105
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.82773	67.2	-	LPIJ01	135	7140	6751	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449561	GCA_001532355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/355/GCA_001532355.1_ASM153235v1	-	MSMB2187WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18175	64.2	-	FSAO01	32	5194	5041	12/14/16	3/21/17	Contig	SC	SAMEA2070555	GCA_900131575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/575/GCA_900131575.1_10665_4_14	-	269
Enterobacter cloacae	550	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.35409	54.5	-	NGRJ01	7	5375	5049	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521878	GCA_002151825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/825/GCA_002151825.1_ASM215182v1	-	BWH71
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.75563	31.2	-	JOUZ01	71	1824	1725	11/10/15	3/18/17	Contig	FDA	SAMN02693022	GCA_001442265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/265/GCA_001442265.1_Campylobacter_coli_CVM_N7454_v1.0	-	CVM N7454
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.29851	59.8	-	FCHD01	27	5019	4852	1/21/16	3/27/17	Scaffold	SC	SAMEA2273921	GCA_001538445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/445/GCA_001538445.1_12082_2_56	-	2880STDY5682848
Lactobacillus plantarum	1590	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.32089	44.4	-	MKGF01	94	3253	3115	2/1/17	3/29/17	Scaffold	ETH Zurich	SAMN05717765	GCA_001982265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/265/GCA_001982265.1_ASM198226v1	-	RI-515
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.63764	30.4	chromosome:NZ_CP010481.1/CP010481.1	-	1	1729	1585	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246009	GCA_001506385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/385/GCA_001506385.1_ASM150638v1	-	CJ677CC016
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.17522	41.1	-	CVYN01	85	2130	1952	6/23/15	3/26/17	Contig	SC	SAMEA1033004	GCA_001178925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/925/GCA_001178925.1_6817_2_96	-	EQUI0049
Enterococcus faecium EnGen0164	1157459	PRJNA88347	88347	Terrabacteria group	Firmicutes	2.67799	38.2	-	AIUL01	22	2751	2521	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808991	GCA_000395565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/565/GCA_000395565.1_Ente_faec_UAA721_V1	-	UAA721
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.0936	52.6	-	CQOP01	90	2454	2127	3/23/15	4/10/17	Contig	SC	SAMEA1690468	GCA_001167545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/545/GCA_001167545.1_8289_2_10	-	GCGS010
Enterococcus faecalis EnGen0240	1158621	PRJNA88869	88869	Terrabacteria group	Firmicutes	2.95877	37.6	-	AJAZ01	6	3006	2850	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809126	GCA_000394135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/135/GCA_000394135.1_Ente_faec_SS-6_V1	-	SS-6
Clostridium botulinum	1491	PRJNA266242	266242	Terrabacteria group	Firmicutes	3.81083	28.6	-	LAGL01	1680	-	-	3/27/15	3/27/15	Contig	Centers for Disease Control and Prevention	SAMN03169473	GCA_000965345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/345/GCA_000965345.1_ASM96534v1	-	CDC68016NT
Klebsiella pneumoniae UCI 19	1400172	PRJNA219269	219269	Proteobacteria	Gammaproteobacteria	5.42676	57.3	-	JCMK01	3	5484	5261	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02356599	GCA_000566985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/566/985/GCA_000566985.1_Kleb_pneu_UCI_19_V1	-	UCI 19
Vibrio parahaemolyticus S064	1394607	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.0666	45.3	-	AWLB01	677	4827	4622	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338921	GCA_000490975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/975/GCA_000490975.1_S064	-	S064
Oenococcus oeni	1247	PRJNA282732	282732	Terrabacteria group	Firmicutes	1.71141	38.1	-	LCTP01	4	1750	929	7/1/15	7/1/15	Scaffold	Universidad de Chile	SAMN03575871	GCA_001045115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/115/GCA_001045115.1_ASM104511v1	-	399
Clostridioides difficile Y381	1151390	PRJNA85955	85955	Terrabacteria group	Firmicutes	4.06073	28.5	-	AVLI01	60	3802	3662	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766765	GCA_000451545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/545/GCA_000451545.2_ASM45154v2	-	Y381
Vibrio cholerae HC-43A1	991938	PRJNA63883	63883	Proteobacteria	Gammaproteobacteria	4.05323	47.5	-	AGUQ01	19	3882	3702	11/4/11	3/22/17	Contig	Institute for Genome Sciences	SAMN02435809	GCA_000234435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/435/GCA_000234435.2_ASM23443v2	-	HC-43A1
Burkholderia pseudomallei MSHR7343	1435049	PRJNA231067	231067	Proteobacteria	Betaproteobacteria	7.2217	68.1	-	JQDM01	182	7575	6930	11/7/14	3/25/17	Contig	Los Alamos National Laboratory	SAMN02982051	GCA_000773145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/145/GCA_000773145.1_BCW_36	25676747	MSHR7343
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.42493	67	-	MUWL01	160	8054	7575	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05002001	GCA_001994285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/285/GCA_001994285.1_ASM199428v1	-	VC7964
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.60558	50.8	-	FUCQ01	378	5167	4413	1/28/17	2/26/17	Contig	SC	SAMEA1570034	GCA_900160245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/245/GCA_900160245.1_8403_8_55	-	sh1439
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.46781	38.3	-	FJAF01	21	3148	3006	2/20/16	3/27/17	Contig	SC	SAMEA2059846	GCA_900053335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/335/GCA_900053335.1_10771_1_2	-	2531STDY5467283
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.26189	58.5	-	MTYM01	346	6072	5497	4/27/17	5/3/17	Scaffold	Massey University	SAMN06197069	GCA_002111685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/685/GCA_002111685.1_ASM211168v1	28369338	C68
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.01044	41.2	-	CEJU01	62	1984	1896	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233992	GCA_000942595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/595/GCA_000942595.1_Velvet_assembly	-	S12S
Streptococcus agalactiae CCUG 44110	1105264	PRJNA86251	86251	Terrabacteria group	Firmicutes	2.07588	35.3	-	ANDK01	35	2162	2061	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991094	GCA_000310525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/525/GCA_000310525.1_ASM31052v1	-	CCUG 44110
Acinetobacter baumannii ZWS1122	1223564	PRJNA172873	172873	Proteobacteria	Gammaproteobacteria	3.93726	39	-	AMGR01	60	3797	3667	9/27/12	3/15/17	Contig	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN02470994	GCA_000299655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/655/GCA_000299655.1_ASM29965v1	23209232	ZWS1122
Pseudomonas aeruginosa U2504	1402496	PRJNA219857	219857	Proteobacteria	Gammaproteobacteria	7.09654	65.8	-	AXRG01	11	6836	6627	10/24/13	3/9/17	Scaffold	Broad Institute	SAMN02360668	GCA_000481785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/785/GCA_000481785.1_Pseu_aeru_U2504_V1	-	U2504
Streptococcus pyogenes ABC020057442	1439286	PRJNA233036	233036	Terrabacteria group	Firmicutes	1.8325	38.5	-	JJJW01	2	1883	1759	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567385	GCA_000628165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/165/GCA_000628165.1_Stre_pyog_ABC020057442_V1	-	ABC020057442
Neisseria meningitidis 63023	1145129	PRJNA83471	83471	Proteobacteria	Betaproteobacteria	2.24858	51.9	-	APSP01	141	2630	2206	5/1/13	3/21/17	Contig	IGS	SAMN01780079	GCA_000386265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/265/GCA_000386265.2_ASM38626v2	-	63023
Helicobacter pylori Hp A-27	992057	PRJNA64141	64141	Proteobacteria	delta/epsilon subdivisions	1.64777	38.8	-	AKOW01	6	1625	1458	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778867	GCA_000274045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/045/GCA_000274045.2_ASM27404v2	23661595	Hp A-27
Streptococcus pneumoniae GA08825	1069628	PRJNA70989	70989	Terrabacteria group	Firmicutes	2.10342	39.8	-	AILK01	10	2294	2020	3/7/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00723186	GCA_000252185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/185/GCA_000252185.2_ASM25218v2	-	GA08825
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.63613	30.4	chromosome:NZ_CP010482.1/CP010482.1	-	1	1722	1578	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246018	GCA_001506405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/405/GCA_001506405.1_ASM150640v1	-	CJ677CC041
Mycobacterium tuberculosis NCGM2209	1078763	PRJDA72517	72517	Terrabacteria group	Actinobacteria	4.51896	64.4	-	BADQ01	107	4329	4051	9/23/11	5/18/17	Scaffold	National Center for Global Health and Medicine	SAMD00036586	GCA_000291765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/765/GCA_000291765.1_ASM29176v1	22072647	NCGM2209
Bacillus cereus	1396	PRJNA288255	288255	Terrabacteria group	Firmicutes	5.52928	35.6	-	LQZY01	377	6041	5585	2/23/16	3/27/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN03797430	GCA_001566465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/465/GCA_001566465.1_ASM156646v1	-	MB.8
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.60272	31.9	-	LXRX01	59	2650	2479	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04942509	GCA_001658715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/715/GCA_001658715.1_ASM165871v1	-	LRKNS087
Listeria monocytogenes	1639	PRJNA327110	327110	Terrabacteria group	Firmicutes	3.05537	37.8	-	MBOL01	16	3151	3043	5/16/17	5/24/17	Scaffold	Health Canada	SAMN05301557	GCA_002144265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/265/GCA_002144265.1_ASM214426v1	-	HPB5415_100
Yersinia pestis CMCC02041	755898	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.48919	47.6	-	ADQC01	1281	4391	3959	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403025	GCA_000323805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/805/GCA_000323805.1_ASM32380v1	23271803	CMCC02041
Campylobacter jejuni subsp. jejuni 51037	889227	PRJNA52879	52879	Proteobacteria	delta/epsilon subdivisions	1.74736	30.2	-	AIPB01	207	1831	1700	3/16/12	3/15/17	Contig	Cornell University	SAMN02429016	GCA_000254835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/835/GCA_000254835.2_ASM25483v2	-	51037
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.63369	30.4	chromosome:NZ_CP010483.1/CP010483.1	-	1	1724	1587	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246050	GCA_001506425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/425/GCA_001506425.1_ASM150642v1	-	CJ677CC535
Staphylococcus aureus HI022	1156999	PRJNA88555	88555	Terrabacteria group	Firmicutes	2.84561	32.8	-	AIVL01	3	3004	2847	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792168	GCA_000359805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/805/GCA_000359805.1_Stap_aure_HI022_V1	-	HI022
Staphylococcus aureus HI049B	1156996	PRJNA88549	88549	Terrabacteria group	Firmicutes	2.91519	32.7	-	AIVI01	3	3073	2906	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00792148	GCA_000359825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/825/GCA_000359825.1_Stap_aure_HI049B_V1	-	HI049B
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.63272	30.4	chromosome:NZ_CP010488.1/CP010488.1	-	1	1718	1585	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246030	GCA_001506445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/445/GCA_001506445.1_ASM150644v1	-	CJ677CC092
Campylobacter jejuni subsp. jejuni 110-21	889214	PRJNA52849	52849	Proteobacteria	delta/epsilon subdivisions	1.61923	30.5	-	AIPC01	113	1712	1619	3/16/12	3/15/17	Contig	Cornell University	SAMN02428995	GCA_000254855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/855/GCA_000254855.2_ASM25485v2	-	110-21
Yersinia pestis CMCC03001	755899	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.36662	47.6	-	ADQD01	1082	4193	3901	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403026	GCA_000323825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/825/GCA_000323825.1_ASM32382v1	23271803	CMCC03001
Listeria monocytogenes	1639	PRJNA327110	327110	Terrabacteria group	Firmicutes	3.05403	37.8	-	MBOK01	13	3138	3046	5/16/17	5/24/17	Scaffold	Health Canada	SAMN05301555	GCA_002144295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/295/GCA_002144295.1_ASM214429v1	-	HPB5415_1
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.74965	31.8	-	LXRY01	88	2810	2667	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04942511	GCA_001658725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/725/GCA_001658725.1_ASM165872v1	-	LRKNS089
Bacillus cereus	1396	PRJNA288256	288256	Terrabacteria group	Firmicutes	5.77314	35.5	-	LQZX01	354	6311	5866	2/23/16	3/27/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN03797525	GCA_001566515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/515/GCA_001566515.1_ASM156651v1	27284145	MB.8-1
Mycobacterium tuberculosis SP21	1274431	PRJNA181180	181180	Terrabacteria group	Actinobacteria	4.44843	64.5	-	AOUF01	30	4437	3938	4/15/13	5/19/17	Scaffold	"Research Institute of Physical-Chemical Medicine, Moscow, Russia"	SAMN02470832	GCA_000364945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/945/GCA_000364945.1_Mycibacterium_tuberculosis_SP21_genome_scaffolding	-	SP21
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.63127	30.4	chromosome:NZ_CP010491.1/CP010491.1	-	1	1714	1581	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246044	GCA_001506505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/505/GCA_001506505.1_ASM150650v1	-	CJ677CC529
Streptococcus pneumoniae GA02506	1069626	PRJNA70985	70985	Terrabacteria group	Firmicutes	2.04964	39.8	-	AILJ01	8	2250	1983	3/7/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00722746	GCA_000252205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/205/GCA_000252205.2_ASM25220v2	-	GA02506
Helicobacter pylori Hp H-3	992059	PRJNA64145	64145	Proteobacteria	delta/epsilon subdivisions	1.71204	38.9	-	AKOX01	11	1645	1492	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778911	GCA_000274065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/065/GCA_000274065.1_ASM27406v1	23661595	Hp H-3
Neisseria meningitidis 70082	1145131	PRJNA83475	83475	Proteobacteria	Betaproteobacteria	2.21215	51.9	-	APSR01	140	2559	2169	5/1/13	3/21/17	Contig	IGS	SAMN01780081	GCA_000386305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/305/GCA_000386305.2_ASM38630v2	-	70082
Streptococcus pyogenes ABC020047977	1439168	PRJNA233039	233039	Terrabacteria group	Firmicutes	1.87535	38.5	-	JJJX01	7	1924	1808	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567388	GCA_000628185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/185/GCA_000628185.1_Stre_pyog_ABC020047977_V1	-	ABC020047977
Leptospira interrogans serovar Copenhageni str. Fiocruz R154	1001603	PRJNA65081	65081	Spirochaetes	Spirochaetia	4.54824	35	-	AFMJ01	488	4131	3723	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254366	GCA_000216035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/035/GCA_000216035.2_CLC_glsol163	-	Fiocruz R154
Pseudomonas aeruginosa JJ692	1402495	PRJNA219856	219856	Proteobacteria	Gammaproteobacteria	6.7471	66.1	-	AXRH01	5	6402	6227	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360667	GCA_000481805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/805/GCA_000481805.1_Pseu_aeru_JJ692_V1	-	JJ692
Acinetobacter baumannii ZWS1219	1224141	PRJNA172947	172947	Proteobacteria	Gammaproteobacteria	3.96473	39	-	AMGS01	70	3805	3674	9/27/12	3/15/17	Contig	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN02470995	GCA_000299675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/675/GCA_000299675.1_ASM29967v1	23209232	ZWS1219
Streptococcus agalactiae LMG 15090	1105276	PRJNA86279	86279	Terrabacteria group	Firmicutes	2.05724	35.2	-	ANDW01	24	2138	2031	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991124	GCA_000310545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/545/GCA_000310545.1_ASM31054v1	-	LMG 15090
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.051	41.1	-	CEKD01	68	2039	1948	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234093	GCA_000942635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/635/GCA_000942635.1_Velvet_assembly	-	S97P
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.12081	58.6	-	MTYN01	327	5860	5376	4/27/17	5/3/17	Scaffold	Massey University	SAMN06197071	GCA_002111695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/695/GCA_002111695.1_ASM211169v1	28369338	C70
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.34875	38.3	-	FJBO01	18	3068	2962	2/20/16	3/27/17	Contig	SC	SAMEA2059858	GCA_900053345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/345/GCA_900053345.1_10771_1_20	-	2531STDY5467301
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.69789	50.8	-	FUCY01	360	5265	4515	1/28/17	2/26/17	Contig	SC	SAMEA1569756	GCA_900160325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/325/GCA_900160325.1_8403_8_63	-	sh1447
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.5067	67	-	MUWM01	174	8150	7628	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05002002	GCA_001994315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/315/GCA_001994315.1_ASM199431v1	-	VC7965
Burkholderia pseudomallei MSHR5609	1434932	PRJNA230990	230990	Proteobacteria	Betaproteobacteria	7.18678	68.1	-	JQDJ01	149	7508	6897	11/7/14	3/25/17	Contig	Los Alamos National Laboratory	SAMN02981702	GCA_000773155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/155/GCA_000773155.1_BCW_34	25676747	MSHR5609
Vibrio cholerae HC-61A1	991942	PRJNA63891	63891	Proteobacteria	Gammaproteobacteria	4.06794	47.5	-	AGUS01	21	3898	3686	11/4/11	3/27/17	Contig	Institute for Genome Sciences	SAMN00222981	GCA_000234455.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/455/GCA_000234455.3_ASM23445v3	-	HC-61A1
Clostridioides difficile P3	1151395	PRJNA85965	85965	Terrabacteria group	Firmicutes	3.99458	28.3	-	AVLN01	169	3738	3528	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766700	GCA_000451565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/565/GCA_000451565.2_ASM45156v2	-	P3
Oenococcus oeni	1247	PRJNA282732	282732	Terrabacteria group	Firmicutes	1.91392	37.7	-	LCTM01	5	1949	999	7/1/15	7/1/15	Scaffold	Universidad de Chile	SAMN03575873	GCA_001045165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/165/GCA_001045165.1_ASM104516v1	-	139
Vibrio parahaemolyticus S063	1394606	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.12989	45.2	-	AWLC01	525	4897	4695	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338920	GCA_000490995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/490/995/GCA_000490995.1_S063	-	S063
Klebsiella pneumoniae BIDMC 45	1400162	PRJNA219262	219262	Proteobacteria	Gammaproteobacteria	5.72504	57	-	JCMM01	11	5807	5547	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02356594	GCA_000567025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/025/GCA_000567025.1_Kleb_pneu_BIDMC_45_V1	-	BIDMC 45
Clostridium botulinum	1491	PRJNA266242	266242	Terrabacteria group	Firmicutes	3.88834	28	-	LAGE01	198	-	-	3/27/15	3/27/15	Contig	Centers for Disease Control and Prevention	SAMN03169466	GCA_000965385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/385/GCA_000965385.1_ASM96538v1	-	ATCC 7949
Enterococcus faecalis EnGen0241	1158622	PRJNA88871	88871	Terrabacteria group	Firmicutes	2.89056	37.6	-	AJBA01	4	2949	2780	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809127	GCA_000394155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/155/GCA_000394155.1_Ente_faec_FA2-2_V1	-	FA2-2
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14972	52.4	-	CQIG01	79	2519	2207	3/23/15	4/10/17	Contig	SC	SAMEA1690429	GCA_001167785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/785/GCA_001167785.1_8727_8_44	-	GCGS140
Enterococcus faecium EnGen0165	1157460	PRJNA88349	88349	Terrabacteria group	Firmicutes	2.6558	38.5	-	AIUM01	17	2665	2415	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808992	GCA_000395585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/585/GCA_000395585.1_Ente_faec_UAA722_V1	-	UAA722
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.13036	41.2	-	CWCH01	72	2065	1889	6/23/15	3/26/17	Contig	SC	SAMEA1033005	GCA_001178945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/945/GCA_001178945.1_6903_5_93	-	EQUI0142
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.63251	30.4	chromosome:NZ_CP010494.1/CP010494.1	-	1	1721	1586	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246022	GCA_001506565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/565/GCA_001506565.1_ASM150656v1	-	CJ677CC059
Lactobacillus plantarum	1590	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.32806	44.3	-	MKDS01	78	3261	3098	2/1/17	3/29/17	Scaffold	ETH Zurich	SAMN05717744	GCA_001982285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/285/GCA_001982285.1_ASM198228v1	-	RI-139
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.16774	59.9	-	FCFS01	17	4968	4798	1/21/16	3/27/17	Scaffold	SC	SAMEA2274081	GCA_001538465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/465/GCA_001538465.1_12045_8_5	-	2880STDY5683010
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.78896	31.1	-	JOVE01	102	1877	1764	11/10/15	3/18/17	Contig	FDA	SAMN02693019	GCA_001442305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/305/GCA_001442305.1_Campylobacter_coli_CVM_N9036_v1.0	-	CVM N9036
Enterobacter cloacae	550	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.59214	55.4	-	NGRL01	18	5418	4996	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521883	GCA_002151855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/855/GCA_002151855.1_ASM215185v1	-	MGH132
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21671	64.2	-	FSAP01	47	5235	5065	12/14/16	3/21/17	Contig	SC	SAMEA2068683	GCA_900131595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/595/GCA_900131595.1_10665_4_15	-	270
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.6556	67.2	-	LPIK01	133	7000	6617	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449562	GCA_001532375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/375/GCA_001532375.1_ASM153237v1	-	MSMB2188WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.1492	55.2	-	LRCD01	241	5258	4798	1/19/16	3/27/17	Contig	JCVI	SAMN04407771	GCA_001518065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/065/GCA_001518065.1_ASM151806v1	-	GN03193
Pseudomonas sp. NBRC 111143	1661058	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	6.32719	62.8	-	BCBT01	125	5865	5646	10/3/15	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00031678	GCA_001320965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/965/GCA_001320965.1_ASM132096v1	-	NBRC 111143
Streptomyces sp. NRRL F-5126	1463857	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.18602	72	-	JOFZ01	168	6385	6141	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645277	GCA_000721265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/265/GCA_000721265.1_ASM72126v1	-	NRRL F-5126
Bacillus sp. 45385	1960589	PRJNA374920	374920	Terrabacteria group	Firmicutes	4.55504	38.2	-	MVJM01	12	4520	4246	5/22/17	6/16/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN06339694	GCA_002156385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/385/GCA_002156385.1_ASM215638v1	-	45385
Staphylococcus sp. TE8	1472720	PRJNA240948	240948	Terrabacteria group	Firmicutes	2.51664	32.8	-	JMGB01	8	2462	2339	5/19/14	4/10/17	Scaffold	Institute of Genomics and Integrative Biology	SAMN02736786	GCA_000692055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/055/GCA_000692055.1_Staphylococcus_sp._strain_TE8_genome	-	TE8
Clostridium sp. UBA4548	1946361	PRJNA348753	348753	Terrabacteria group	Firmicutes	4.16467	31.1	-	DGLI01	51	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455279	GCA_002387895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/895/GCA_002387895.1_ASM238789v1	28894102	-
Clostridium sp. UBA4395	1946360	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.66779	29.9	-	DGRF01	99	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452120	GCA_002390995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/995/GCA_002390995.1_ASM239099v1	28894102	-
Staphylococcus sp. MB377	1663564	PRJNA327156	327156	Terrabacteria group	Firmicutes	2.34906	32.8	-	MAON01	63	2341	2137	12/27/16	4/16/17	Scaffold	Fatima Jinnah Women University	SAMN05323128	GCA_001922505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/505/GCA_001922505.1_ASM192250v1	-	MB377
Bacillus sp. K2I17	2014743	PRJNA391242	391242	Terrabacteria group	Firmicutes	6.11211	34.9	-	NJGF01	145	6468	6063	6/27/17	6/29/17	Scaffold	University of Copenhagen	SAMN07259826	GCA_002209985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/985/GCA_002209985.1_ASM220998v1	-	K2I17
Streptomyces sp. NRRL S-1868	1463892	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.74542	73.3	-	JOGD01	257	7173	6756	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645446	GCA_000721305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/305/GCA_000721305.1_ASM72130v1	-	NRRL S-1868
Pseudomonas sp. NBRC 111144	1661059	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	5.42988	62.4	-	BCBU01	187	5142	4904	10/3/15	4/11/17	Contig	National Institute of Technology and Evaluation	SAMD00031679	GCA_001321005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/005/GCA_001321005.1_ASM132100v1	-	NBRC 111144
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.7967	55.3	-	LRCF01	182	4875	4452	1/19/16	3/27/17	Contig	JCVI	SAMN04407773	GCA_001518145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/145/GCA_001518145.1_ASM151814v1	-	GN03433
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.55308	67.3	-	LPIL01	117	6925	6538	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449563	GCA_001532385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/385/GCA_001532385.1_ASM153238v1	-	MSMB2189WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.04514	64.2	-	FSAS01	32	5038	4895	12/14/16	3/21/17	Contig	SC	SAMEA2070556	GCA_900131605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/605/GCA_900131605.1_10665_4_17	-	272
Enterobacter cloacae	550	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.07742	55.1	-	NGRM01	6	4950	4664	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521908	GCA_002151865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/865/GCA_002151865.1_ASM215186v1	-	MGH159
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.63296	31.4	-	JOVG01	95	1695	1604	11/10/15	3/18/17	Contig	FDA	SAMN02693017	GCA_001442345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/345/GCA_001442345.1_Campylobacter_coli_CVM_N9093_v1.0	-	CVM N9093
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.22187	59.8	-	FCFU01	38	4975	4833	1/21/16	3/27/17	Scaffold	SC	SAMEA2274091	GCA_001538485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/485/GCA_001538485.1_12045_8_15	-	2880STDY5683021
Lactobacillus plantarum	1590	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.3719	44.3	-	MKDU01	61	3302	3132	2/1/17	3/29/17	Scaffold	ETH Zurich	SAMN05717746	GCA_001982305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/305/GCA_001982305.1_ASM198230v1	-	RI-146
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.63411	30.4	chromosome:NZ_CP010497.1/CP010497.1	-	1	1717	1579	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246013	GCA_001506605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/605/GCA_001506605.1_ASM150660v1	-	CJ677CC033
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.11761	41.2	-	CWCD01	70	2047	1875	6/23/15	3/26/17	Contig	SC	SAMEA1033006	GCA_001178965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/965/GCA_001178965.1_6903_5_92	-	EQUI0141
Enterococcus faecium EnGen0166	1157461	PRJNA88351	88351	Terrabacteria group	Firmicutes	2.91611	37.9	-	AIUN01	30	2916	2729	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808993	GCA_000395605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/605/GCA_000395605.1_Ente_faec_UAA723_V1	-	UAA723
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.1451	52.4	-	CQIZ01	76	2506	2185	3/23/15	4/11/17	Contig	SC	SAMEA1690437	GCA_001168725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/725/GCA_001168725.1_8727_8_11	-	GCGS107
Enterococcus faecalis EnGen0242	1158623	PRJNA88873	88873	Terrabacteria group	Firmicutes	3.32966	37.5	-	AJBB01	25	3519	3321	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809128	GCA_000394175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/175/GCA_000394175.1_Ente_faec_V587_V1	-	V587
Clostridium botulinum	1491	PRJNA266242	266242	Terrabacteria group	Firmicutes	4.20746	28	-	LAGK01	856	-	-	3/27/15	3/27/15	Contig	Centers for Disease Control and Prevention	SAMN03169472	GCA_000965465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/465/GCA_000965465.1_ASM96546v1	-	CDC68016
Klebsiella pneumoniae BIDMC 53	1400169	PRJNA219261	219261	Proteobacteria	Gammaproteobacteria	5.6128	56.9	-	JCMN01	8	5637	5332	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02356593	GCA_000567045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/045/GCA_000567045.1_Kleb_pneu_BIDMC_53_V1	-	BIDMC 53
Vibrio parahaemolyticus S062	1394605	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.06328	45.3	-	AWLD01	454	4872	4612	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338919	GCA_000491015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/015/GCA_000491015.1_S062	-	S062
Oenococcus oeni	1247	PRJNA282732	282732	Terrabacteria group	Firmicutes	1.75445	37.8	-	LCTN01	4	1803	980	7/1/15	7/1/15	Scaffold	Universidad de Chile	SAMN03575870	GCA_001045185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/185/GCA_001045185.1_ASM104518v1	-	49
Clostridioides difficile P8	1151399	PRJNA85973	85973	Terrabacteria group	Firmicutes	4.29267	28.2	-	AVLR01	203	4018	3823	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766733	GCA_000451585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/585/GCA_000451585.2_ASM45158v2	-	P8
Vibrio cholerae O1 str. 2009V-1046	1124474	PRJNA73589	73589	Proteobacteria	Gammaproteobacteria	4.01422	47.5	-	AHFX01	72	3801	3660	12/12/11	3/22/17	Contig	Public Health Agency of Canada	SAMN00765516	GCA_000237405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/405/GCA_000237405.2_ASM23740v2	22099115	2009V-1046
Burkholderia pseudomallei MSHR5613	1435050	PRJNA231065	231065	Proteobacteria	Betaproteobacteria	7.19008	68.1	-	JQDK01	166	7497	6854	11/7/14	3/25/17	Contig	Los Alamos National Laboratory	SAMN02981721	GCA_000773165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/165/GCA_000773165.1_BCW_35	25676747	MSHR5613
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.27773	67	-	MUWN01	164	7949	7465	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05002003	GCA_001994335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/335/GCA_001994335.1_ASM199433v1	-	VC8069
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.71842	50.8	-	FUDA01	368	5282	4549	1/28/17	2/26/17	Contig	SC	SAMEA1569938	GCA_900160335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/335/GCA_900160335.1_8403_8_64	-	sh1448
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.50319	38.3	-	FJBT01	65	3201	3062	2/20/16	3/27/17	Contig	SC	SAMEA1968638	GCA_900053355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/355/GCA_900053355.1_10060_4_48	-	2531STDY5467329
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.23898	58.5	-	MTYO01	304	6111	5517	4/27/17	5/3/17	Scaffold	Massey University	SAMN06197070	GCA_002111745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/745/GCA_002111745.1_ASM211174v1	28369338	C69
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.02018	41.5	-	CEKA01	110	1986	1858	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234076	GCA_000942655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/655/GCA_000942655.1_Velvet_assembly	-	S91K
Streptococcus agalactiae FSL S3-026	876138	PRJNA86139	86139	Terrabacteria group	Firmicutes	2.25443	35.6	-	ANCL01	125	2425	2117	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993654	GCA_000310565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/565/GCA_000310565.1_ASM31056v1	-	FSL S3-026
Acinetobacter baumannii AB_1582-8	1221245	PRJNA172656	172656	Proteobacteria	Gammaproteobacteria	4.05484	39	-	AMHB01	253	3962	3788	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471275	GCA_000301175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/175/GCA_000301175.1_ASM30117v1	-	AB_1582-8
Pseudomonas aeruginosa S54485	1402494	PRJNA219855	219855	Proteobacteria	Gammaproteobacteria	7.00577	66	-	AXRI01	8	6794	6599	10/24/13	3/9/17	Scaffold	Broad Institute	SAMN02360666	GCA_000481825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/825/GCA_000481825.1_Pseu_aeru_S54485_V1	-	S54485
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2756C6	1001602	PRJNA65079	65079	Spirochaetes	Spirochaetia	4.55022	35	-	AFMI01	302	4056	3734	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254327	GCA_000216055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/055/GCA_000216055.2_CLC_glsol105	-	Fiocruz LV2756C6
Streptococcus pyogenes ABC020048387	1439178	PRJNA233040	233040	Terrabacteria group	Firmicutes	1.83249	38.5	-	JJJY01	2	1882	1759	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567389	GCA_000628205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/205/GCA_000628205.1_Stre_pyog_ABC020048387_V1	-	ABC020048387
Neisseria meningitidis 65012	1145132	PRJNA83477	83477	Proteobacteria	Betaproteobacteria	2.17518	52	-	APSS01	144	2526	2131	5/1/13	3/21/17	Contig	IGS	SAMN01780082	GCA_000386325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/325/GCA_000386325.2_ASM38632v2	-	65012
Helicobacter pylori Hp H-9	992062	PRJNA64151	64151	Proteobacteria	delta/epsilon subdivisions	1.63769	38.9	-	AKPA01	11	1607	1453	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778912	GCA_000274085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/085/GCA_000274085.2_ASM27408v2	23661595	Hp H-9
Streptococcus pneumoniae England14-9	1069625	PRJNA70983	70983	Terrabacteria group	Firmicutes	2.08762	39.6	-	AILI01	8	2262	2002	3/7/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00718798	GCA_000252225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/225/GCA_000252225.2_ASM25222v2	-	England14-9
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.63315	30.4	chromosome:NZ_CP010498.1/CP010498.1	-	1	1716	1582	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246052	GCA_001506625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/625/GCA_001506625.1_ASM150662v1	-	CJ677CC537
Mycobacterium tuberculosis FJ05194	1245275	PRJNA177778	177778	Terrabacteria group	Actinobacteria	4.36331	65.4	-	ANBL01	112	4283	3996	8/23/13	3/8/17	Scaffold	BGI-Shenzhen	SAMN02469373	GCA_000454325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/325/GCA_000454325.1_FJXDR1.0	23965132	FJ05194
Bacillus cereus	1396	PRJNA288263	288263	Terrabacteria group	Firmicutes	5.48614	35.6	-	LRRN01	488	5933	5479	2/23/16	3/27/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN03797532	GCA_001566525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/525/GCA_001566525.1_ASM156652v1	-	MB.20
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.71186	31.8	-	LXRV01	93	2793	2613	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04942505	GCA_001658785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/785/GCA_001658785.1_ASM165878v1	-	LRKNS085
Listeria monocytogenes	1639	PRJNA386027	386027	Terrabacteria group	Firmicutes	2.96428	37.8	-	NGZM01	11	3028	2932	8/14/17	8/16/17	Scaffold	Canadian Food Inspection Agency	SAMN06921414	GCA_002250305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/305/GCA_002250305.1_ASM225030v1	-	ATCC 7644
Yersinia pestis CMCC05009	755900	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.50173	47.7	-	ADQE01	1501	4378	3919	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403027	GCA_000323845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/845/GCA_000323845.1_ASM32384v1	23271803	CMCC05009
Campylobacter jejuni subsp. jejuni 87330	889228	PRJNA52881	52881	Proteobacteria	delta/epsilon subdivisions	1.6104	30.5	-	AIPD01	107	1711	1609	3/16/12	3/15/17	Contig	Cornell University	SAMN02428964	GCA_000254875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/875/GCA_000254875.2_ASM25487v2	-	87330
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.6336	30.4	chromosome:NZ_CP010499.1/CP010499.1	-	1	1719	1582	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246057	GCA_001506645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/645/GCA_001506645.1_ASM150664v1	-	CJ677CC542
Staphylococcus aureus HI049C	1157000	PRJNA88557	88557	Terrabacteria group	Firmicutes	2.91533	32.7	-	AIVM01	3	3076	2907	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792169	GCA_000359845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/845/GCA_000359845.1_Stap_aure_HI049C_V1	-	HI049C
Staphylococcus aureus HI049	1156994	PRJNA88545	88545	Terrabacteria group	Firmicutes	2.90084	32.7	-	AIVG01	4	3061	2896	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792126	GCA_000359865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/865/GCA_000359865.1_Stap_aure_HI049_V1	-	HI049
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.63563	30.4	chromosome:NZ_CP010503.1/CP010503.1	-	1	1722	1583	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246016	GCA_001506745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/745/GCA_001506745.1_ASM150674v1	-	CJ677CC039
Campylobacter jejuni subsp. jejuni 87459	889229	PRJNA52883	52883	Proteobacteria	delta/epsilon subdivisions	1.728	30.4	-	AIPE01	201	1845	1705	3/16/12	3/15/17	Contig	Cornell University	SAMN02428951	GCA_000254895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/895/GCA_000254895.2_ASM25489v2	-	87459
Yersinia pestis CMCC05013	755901	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.3951	47.8	-	ADQF01	1360	4227	3861	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403028	GCA_000323865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/865/GCA_000323865.1_ASM32386v1	23271803	CMCC05013
Listeria monocytogenes serotype 1/2a str. F6854	267409	PRJNA10753	10753	Terrabacteria group	Firmicutes	2.95029	37.8	-	AADQ01	133	3088	2896	5/4/04	2/26/17	Contig	TIGR	SAMN02415268	GCA_000167135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/135/GCA_000167135.1_ASM16713v1	15115801	1/2a F6854
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.71556	31.8	-	LXRZ01	72	2781	2615	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04942517	GCA_001658805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/805/GCA_001658805.1_ASM165880v1	-	LRKNS092
Bacillus cereus	1396	PRJNA288268	288268	Terrabacteria group	Firmicutes	6.50724	37.2	-	LRRO01	1830	6377	5894	2/23/16	4/10/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN03797557	GCA_001566535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/535/GCA_001566535.1_ASM156653v1	-	MB.22
Mycobacterium tuberculosis GuangZ0019	1245787	PRJNA177783	177783	Terrabacteria group	Actinobacteria	4.37331	65.5	-	ANFI01	97	4328	4080	8/23/13	3/8/17	Scaffold	BGI-Shenzhen	SAMN02469376	GCA_000454345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/345/GCA_000454345.1_GZXDR1.0	23965132	GuangZ0019
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.63638	30.4	chromosome:NZ_CP010504.1/CP010504.1	-	1	1723	1573	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246028	GCA_001506765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/765/GCA_001506765.1_ASM150676v1	-	CJ677CC085
Streptococcus pneumoniae GA05578	1069623	PRJNA70979	70979	Terrabacteria group	Firmicutes	2.10756	39.8	-	AILH01	7	2312	2060	3/7/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00722745	GCA_000252245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/245/GCA_000252245.2_ASM25224v2	-	GA05578
Helicobacter pylori Hp H-6	992061	PRJNA64149	64149	Proteobacteria	delta/epsilon subdivisions	1.70799	39	-	AKOZ01	10	1657	1455	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778894	GCA_000274105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/105/GCA_000274105.1_ASM27410v1	23661595	Hp H-6
Neisseria meningitidis 64182	1145133	PRJNA83479	83479	Proteobacteria	Betaproteobacteria	2.19052	51.9	-	APST01	135	2509	2149	5/1/13	3/15/17	Contig	IGS	SAMN01780083	GCA_000386345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/345/GCA_000386345.2_ASM38634v2	-	64182
Streptococcus pyogenes ABC020052898	1439223	PRJNA233041	233041	Terrabacteria group	Firmicutes	1.83259	38.5	-	JJJZ01	2	1883	1758	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567390	GCA_000628225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/225/GCA_000628225.1_Stre_pyog_ABC020052898_V1	-	ABC020052898
Leptospira interrogans serovar Copenhageni str. 2001025091	1001987	PRJNA65077	65077	Spirochaetes	Spirochaetia	4.52668	35	-	AFMH01	309	4031	3707	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254376	GCA_000216075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/075/GCA_000216075.2_CLC_glsol044	-	2001025091
Pseudomonas aeruginosa UDL	1402493	PRJNA219854	219854	Proteobacteria	Gammaproteobacteria	6.30517	66.5	-	AXRJ01	2	5930	5769	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360665	GCA_000481845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/845/GCA_000481845.1_Pseu_aeru_UDL_V1	-	UDL
Acinetobacter baumannii AB_1594-8	1221247	PRJNA172658	172658	Proteobacteria	Gammaproteobacteria	3.97307	39	-	AMHD01	222	3853	3677	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471258	GCA_000301195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/195/GCA_000301195.1_ASM30119v1	-	AB_1594-8
Streptococcus agalactiae CCUG 28551	1105254	PRJNA86215	86215	Terrabacteria group	Firmicutes	2.08563	35.3	-	ANDA01	113	2221	2060	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991061	GCA_000310585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/585/GCA_000310585.1_ASM31058v1	-	CCUG 28551
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03738	41.2	-	CEJH01	72	2022	1918	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233978	GCA_000942795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/795/GCA_000942795.1_Velvet_assembly	-	S10X
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.15684	58.5	-	MTYP01	365	5898	5390	4/27/17	5/3/17	Scaffold	Massey University	SAMN06197072	GCA_002111755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/755/GCA_002111755.1_ASM211175v1	28369338	C73
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.38731	38.3	-	FJBM01	32	3073	2946	2/20/16	3/27/17	Contig	SC	SAMEA2059849	GCA_900053365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/365/GCA_900053365.1_10771_1_6	-	2531STDY5467287
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.60626	50.7	-	FUDD01	358	5113	4407	1/28/17	2/26/17	Contig	SC	SAMEA1569924	GCA_900160375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/375/GCA_900160375.1_8403_8_68	-	sh1452
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.38438	67	-	MUWO01	191	8027	7535	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05002004	GCA_001994345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/345/GCA_001994345.1_ASM199434v1	-	VC8068
Burkholderia pseudomallei MSHR5569	1434925	PRJNA230982	230982	Proteobacteria	Betaproteobacteria	7.10259	68.2	-	JQDL01	138	7351	6756	11/7/14	3/25/17	Contig	Los Alamos National Laboratory	SAMN02981823	GCA_000773215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/215/GCA_000773215.1_BCW_28	25676747	MSHR5569
Vibrio cholerae O1 str. 2009V-1085	1124469	PRJNA73589	73589	Proteobacteria	Gammaproteobacteria	4.01438	47.5	-	AHFY01	73	3803	3656	12/12/11	3/22/17	Contig	Public Health Agency of Canada	SAMN00765527	GCA_000237425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/425/GCA_000237425.2_ASM23742v2	22099115	2009V-1085
Clostridioides difficile P7	1151398	PRJNA85971	85971	Terrabacteria group	Firmicutes	4.04959	28.4	-	AVLQ01	243	3739	3567	8/20/13	3/15/17	Contig	Institute for Genome Sciences	SAMN01766724	GCA_000451605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/605/GCA_000451605.1_ASM45160v1	-	P7
Oenococcus oeni	1247	PRJNA282732	282732	Terrabacteria group	Firmicutes	1.71975	38.1	-	LCTO01	6	1755	937	7/1/15	7/1/15	Scaffold	Universidad de Chile	SAMN03575872	GCA_001045205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/205/GCA_001045205.1_ASM104520v1	-	565
Vibrio parahaemolyticus S060	1394604	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	4.93672	45.4	-	AWLE01	734	4818	4468	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338918	GCA_000491035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/035/GCA_000491035.1_S060	-	S060
Klebsiella pneumoniae BIDMC 52	1400168	PRJNA219260	219260	Proteobacteria	Gammaproteobacteria	5.32857	57.5	-	JCMO01	7	5248	5019	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02356592	GCA_000567065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/065/GCA_000567065.1_Kleb_pneu_BIDMC_52_V1	-	BIDMC 52
Clostridium botulinum	1491	PRJNA266242	266242	Terrabacteria group	Firmicutes	4.25226	27.8	-	LAGM01	570	-	-	3/27/15	3/27/15	Contig	Centers for Disease Control and Prevention	SAMN03169475	GCA_000965505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/505/GCA_000965505.1_ASM96550v1	-	Prevot1662
Enterococcus faecalis EnGen0243	1158624	PRJNA88875	88875	Terrabacteria group	Firmicutes	3.19702	37.2	-	AJBC01	45	3344	3186	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809129	GCA_000394195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/195/GCA_000394195.1_Ente_faec_SF28073_V1	-	SF28073
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.1547	52.4	-	CQHM01	82	2517	2188	3/23/15	4/11/17	Contig	SC	SAMEA1690371	GCA_001171665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/665/GCA_001171665.1_8289_2_41	-	GCGS041
Enterococcus faecium EnGen0167	1157462	PRJNA88353	88353	Terrabacteria group	Firmicutes	2.96948	37.7	-	AIUO01	66	3065	2835	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808994	GCA_000395625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/625/GCA_000395625.1_Ente_faec_UAA724_V1	-	UAA724
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.1515	41.2	-	CWDZ01	89	2097	1912	6/23/15	3/26/17	Contig	SC	SAMEA1033007	GCA_001178985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/178/985/GCA_001178985.1_6903_7_36	-	EQUI0181
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.63521	30.4	chromosome:NZ_CP010505.1/CP010505.1	-	1	1720	1576	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246020	GCA_001506785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/785/GCA_001506785.1_ASM150678v1	-	CJ677CC052
Lactobacillus plantarum	1590	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.32093	44.3	-	MKDV01	100	3253	3085	2/1/17	3/29/17	Scaffold	ETH Zurich	SAMN05717747	GCA_001982325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/325/GCA_001982325.1_ASM198232v1	-	RI-147
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.00334	60.1	-	FCJY01	18	4749	4600	1/21/16	3/27/17	Scaffold	SC	SAMEA2274017	GCA_001538505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/505/GCA_001538505.1_12082_3_45	-	2880STDY5682945
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.9023	31.1	-	JOUJ01	104	2014	1893	11/10/15	3/18/17	Contig	FDA	SAMN02693027	GCA_001442375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/375/GCA_001442375.1_Campylobacter_coli_CVM_N18323_v1.0	-	CVM N18323
Enterobacter cloacae	550	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.9253	54.3	-	NGRN01	10	4701	4459	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521909	GCA_002151875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/875/GCA_002151875.1_ASM215187v1	-	MGH160
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.90713	64.1	-	FVCY01	13	4914	4791	3/10/17	3/18/17	Contig	SC	SAMEA2068794	GCA_900131615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/615/GCA_900131615.1_10665_4_21	-	276
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.56297	67.3	-	LPIM01	131	6920	6543	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449564	GCA_001532425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/425/GCA_001532425.1_ASM153242v1	-	MSMB2190WGS
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.6802	55.4	-	LRCH01	157	4596	4263	1/19/16	3/27/17	Contig	JCVI	SAMN04407775	GCA_001518195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/195/GCA_001518195.1_ASM151819v1	-	GN03556
Pseudomonas sp. Leaf15	1735680	PRJNA297956	297956	Proteobacteria	Gammaproteobacteria	6.55679	60.2	-	LMKI01	37	6055	5868	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151582	GCA_001421425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/425/GCA_001421425.1_Leaf15	26633631	Leaf15
Streptomyces sp. NRRL S-1831	1463890	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.7161	72.7	-	JOGT01	167	6871	6523	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645462	GCA_000721335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/335/GCA_000721335.1_ASM72133v1	-	NRRL S-1831
Bacillus sp. DSM 27956	1955699	PRJNA373950	373950	Terrabacteria group	Firmicutes	4.37454	43.8	-	MWSH01	63	4469	4323	8/1/17	8/3/17	Scaffold	CSIR- National Chemical Laboratory	SAMN06319184	GCA_002237795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/795/GCA_002237795.1_ASM223779v1	-	DSM 27956
Staphylococcus sp. MB371	1663557	PRJNA356355	356355	Terrabacteria group	Firmicutes	2.87272	32.5	-	MRDD01	124	2859	2760	3/3/17	3/6/17	Scaffold	Fatima Jinnah Women University	SAMN06112319	GCA_002016685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/685/GCA_002016685.1_ASM201668v1	-	MB371
Clostridium sp. UBA3887	1946356	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.75791	29.8	-	DGFZ01	51	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453885	GCA_002391925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/391/925/GCA_002391925.1_ASM239192v1	28894102	-
Clostridium sp. UBA3875	1946355	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.77829	29.7	-	DGGL01	121	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452809	GCA_002392175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/175/GCA_002392175.1_ASM239217v1	28894102	-
Staphylococcus sp. CAG:324	1262969	PRJEB833	206890	Terrabacteria group	Firmicutes	1.67416	28.4	-	CBFU01	22	1502	1476	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138539	GCA_000433035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/433/035/GCA_000433035.1_MGS324	-	-
Bacillus sp. FJAT-44876	2011013	PRJNA390034	390034	Terrabacteria group	Firmicutes	5.51272	38.1	-	NIST01	2	-	-	9/21/17	9/23/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN07212132	GCA_002335745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/745/GCA_002335745.1_ASM233574v1	-	FJAT-44876
Streptomyces sp. NRRL F-5650	1463868	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.3468	72.4	-	JOGV01	215	7513	7054	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645464	GCA_000721365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/365/GCA_000721365.1_ASM72136v1	-	NRRL F-5650
Pseudomonas sp. Leaf58	1736226	PRJNA297956	297956	Proteobacteria	Gammaproteobacteria	6.28312	61.4	-	LMLL01	18	5925	5687	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151606	GCA_001422615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/422/615/GCA_001422615.1_Leaf58	26633631	Leaf58
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.78464	55.5	-	LRCO01	118	4649	4407	1/19/16	3/27/17	Contig	JCVI	SAMN04407785	GCA_001518225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/225/GCA_001518225.1_ASM151822v1	-	GN04225
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.13797	67.5	-	LPIO01	110	6427	6085	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449566	GCA_001532445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/445/GCA_001532445.1_ASM153244v1	-	MSMB2192WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.04491	64.2	-	FSAQ01	38	5046	4900	12/14/16	3/21/17	Contig	SC	SAMEA2068793	GCA_900131625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/625/GCA_900131625.1_10665_4_18	-	273
Enterobacter cloacae	550	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.15448	54.6	-	NGRO01	14	5114	4826	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521926	GCA_002151915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/915/GCA_002151915.1_ASM215191v1	-	MGH177
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.86023	31.1	-	JOVZ01	96	1980	1839	11/10/15	3/18/17	Contig	FDA	SAMN02693033	GCA_001442395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/395/GCA_001442395.1_Campylobacter_coli_CVM_N6401-R_v1.0	-	CVM N6401
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.107	60.1	-	FCFO01	39	4805	4648	1/21/16	3/27/17	Scaffold	SC	SAMEA2273897	GCA_001538525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/525/GCA_001538525.1_12082_2_33	-	2880STDY5682824
Lactobacillus plantarum	1590	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.28233	44.4	-	MKEG01	71	3197	3032	2/1/17	3/29/17	Scaffold	ETH Zurich	SAMN05717763	GCA_001982385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/385/GCA_001982385.1_ASM198238v1	-	RI-513
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.63137	30.4	chromosome:NZ_CP010507.1/CP010507.1	-	1	1716	1579	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246027	GCA_001506825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/825/GCA_001506825.1_ASM150682v1	-	CJ677CC078
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12511	41.2	-	CWCV01	80	2051	1872	6/23/15	3/26/17	Contig	SC	SAMEA1033009	GCA_001179005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/005/GCA_001179005.1_6903_6_18	-	EQUI0163
Enterococcus faecium EnGen0168	1157463	PRJNA88355	88355	Terrabacteria group	Firmicutes	2.89413	38	-	AIUP01	33	2967	2775	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808995	GCA_000395645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/645/GCA_000395645.1_Ente_faec_UAA725_V1	-	UAA725
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.13154	52.6	-	CQLV01	76	2495	2187	3/22/15	4/10/17	Contig	SC	SAMEA1690499	GCA_001171845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/845/GCA_001171845.1_8727_8_92	-	GCGS188
Enterococcus faecalis EnGen0244	1158625	PRJNA88877	88877	Terrabacteria group	Firmicutes	3.22598	37.3	-	AJBD01	11	3325	3142	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809131	GCA_000394215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/215/GCA_000394215.1_Ente_faec_RM4679_V1	-	RM4679
Klebsiella pneumoniae BIDMC 51	1400167	PRJNA219259	219259	Proteobacteria	Gammaproteobacteria	5.49215	57.3	-	JCMP01	4	5443	5185	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02356591	GCA_000567085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/085/GCA_000567085.1_Kleb_pneu_BIDMC_51_V1	-	BIDMC 51
Vibrio parahaemolyticus S058	1394603	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.03073	45.2	-	AWLF01	499	4901	4551	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338917	GCA_000491055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/055/GCA_000491055.1_S058	-	S058
Clostridioides difficile P9	1151400	PRJNA85975	85975	Terrabacteria group	Firmicutes	4.04168	28.2	-	AVLS01	174	3767	3562	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766734	GCA_000451625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/625/GCA_000451625.2_ASM45162v2	-	P9
Vibrio cholerae O1 str. 2009V-1096	1124470	PRJNA73589	73589	Proteobacteria	Gammaproteobacteria	4.01648	47.5	-	AHFZ01	73	3811	3661	12/12/11	3/22/17	Contig	Public Health Agency of Canada	SAMN00765530	GCA_000237445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/445/GCA_000237445.2_ASM23744v2	22099115	2009V-1096
Burkholderia pseudomallei ABCPW 107	1434928	PRJNA230986	230986	Proteobacteria	Betaproteobacteria	7.25994	68.1	-	JQDN01	158	7613	6968	11/7/14	3/25/17	Contig	Los Alamos National Laboratory	SAMN02983204	GCA_000773235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/235/GCA_000773235.1_BCW_30	25676747	ABCPW 107
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.27586	67	-	MUWP01	212	7946	7435	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05002005	GCA_001994375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/375/GCA_001994375.1_ASM199437v1	-	VC8542
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.63658	50.7	-	FUDH01	351	5125	4484	1/28/17	2/26/17	Contig	SC	SAMEA1569802	GCA_900160425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/425/GCA_900160425.1_8403_8_73	-	sh1457
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.37017	38.2	-	FJED01	21	3074	2971	2/20/16	3/27/17	Contig	SC	SAMEA1965236	GCA_900053375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/375/GCA_900053375.1_10771_3_57	-	2531STDY5467434
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.06605	58.6	-	MTYQ01	326	5814	5305	4/27/17	5/3/17	Scaffold	Massey University	SAMN06197073	GCA_002111785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/785/GCA_002111785.1_ASM211178v1	28369338	C74
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.16515	41	-	CEIZ01	175	2201	2058	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234000	GCA_000942835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/835/GCA_000942835.1_Velvet_assembly	-	S13A
Streptococcus agalactiae CCUG 37736	1105258	PRJNA86225	86225	Terrabacteria group	Firmicutes	2.04856	35.2	-	ANDE01	40	2126	1994	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991056	GCA_000310605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/605/GCA_000310605.1_ASM31060v1	-	CCUG 37736
Acinetobacter baumannii AB_1595-8	1221248	PRJNA172659	172659	Proteobacteria	Gammaproteobacteria	4.07025	38.9	-	AMHE01	205	3954	3805	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471270	GCA_000301215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/215/GCA_000301215.1_ASM30121v1	-	AB_1595-8
Pseudomonas aeruginosa X24509	1402492	PRJNA219853	219853	Proteobacteria	Gammaproteobacteria	6.45275	66.3	-	AXRK01	5	6108	5927	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360664	GCA_000481865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/865/GCA_000481865.1_Pseu_aeru_X24509_V1	-	X24509
Leptospira interrogans serovar Copenhageni str. 2006007831	1001986	PRJNA65075	65075	Spirochaetes	Spirochaetia	4.54968	35	-	AFMG01	303	4069	3733	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254373	GCA_000216095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/095/GCA_000216095.2_CLC_glsol040	-	2006007831
Streptococcus pyogenes ABC020053250	1439229	PRJNA233044	233044	Terrabacteria group	Firmicutes	1.83136	38.5	-	JJKA01	2	1881	1758	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567393	GCA_000628245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/245/GCA_000628245.1_Stre_pyog_ABC020053250_V1	-	ABC020053250
Neisseria meningitidis 97027	1145134	PRJNA83481	83481	Proteobacteria	Betaproteobacteria	2.17767	52	-	APSU01	122	2511	2133	5/1/13	3/21/17	Contig	IGS	SAMN01780084	GCA_000386365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/365/GCA_000386365.2_ASM38636v2	-	97027
Helicobacter pylori Hp H-19	992066	PRJNA64159	64159	Proteobacteria	delta/epsilon subdivisions	1.63437	39.3	-	AKPE01	7	1600	1430	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778854	GCA_000274125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/125/GCA_000274125.1_ASM27412v1	23661595	Hp H-19
Streptococcus pneumoniae NP141	760883	PRJNA48959	48959	Terrabacteria group	Firmicutes	2.05667	39.9	-	AILG01	9	2234	1966	3/7/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00721740	GCA_000252265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/265/GCA_000252265.2_ASM25226v2	-	NP141
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.63649	30.4	chromosome:NZ_CP010509.1/CP010509.1	-	1	1726	1580	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246055	GCA_001506865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/865/GCA_001506865.1_ASM150686v1	-	CJ677CC540
Mycobacterium tuberculosis 2484AR	1438865	PRJNA233355	233355	Terrabacteria group	Actinobacteria	4.39675	65.6	-	JKBQ01	76	4307	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02567703	GCA_000649215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/215/GCA_000649215.1_Myco_tube_2484AR_V1	-	2484AR
Bacillus cereus	1396	PRJNA288270	288270	Terrabacteria group	Firmicutes	5.21035	35.4	-	LRRP01	509	5590	5169	2/23/16	3/27/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN03797559	GCA_001566705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/705/GCA_001566705.1_ASM156670v1	-	DSM 626
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.72065	31.8	-	LXSA01	82	2789	2623	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04942519	GCA_001658815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/815/GCA_001658815.1_ASM165881v1	-	LRKNS093
Listeria monocytogenes FSL J1-194	393117	PRJNA17299	17299	Terrabacteria group	Firmicutes	2.98982	37.8	-	AARJ02	30	3033	2956	10/13/06	2/26/17	Contig	Broad Institute	SAMN02415199	GCA_000168395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/395/GCA_000168395.1_ASM16839v1	-	FSL J1-194
Yersinia pestis CMCC10012	755902	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.43571	47.7	-	ADQG01	1001	4223	3939	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403029	GCA_000323885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/885/GCA_000323885.1_ASM32388v1	23271803	CMCC10012
Campylobacter jejuni subsp. jejuni 140-16	889215	PRJNA52853	52853	Proteobacteria	delta/epsilon subdivisions	1.6782	30.3	-	AIPF01	123	1770	1661	3/16/12	3/15/17	Contig	Cornell University	SAMN02428952	GCA_000254915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/915/GCA_000254915.2_ASM25491v2	-	140-16
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.63513	30.4	chromosome:NZ_CP010511.1/CP010511.1	-	1	1725	1583	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246023	GCA_001506905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/905/GCA_001506905.1_ASM150690v1	-	CJ677CC061
Staphylococcus aureus HI111	1157002	PRJNA88561	88561	Terrabacteria group	Firmicutes	2.86286	32.8	-	AIVO01	3	3012	2857	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792171	GCA_000359885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/885/GCA_000359885.1_Stap_aure_HI111_V1	-	HI111
Staphylococcus aureus HI168	1157001	PRJNA88559	88559	Terrabacteria group	Firmicutes	2.96814	32.7	-	AIVN01	6	3149	2984	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00792170	GCA_000359905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/905/GCA_000359905.1_Stap_aure_HI168_V1	-	HI168
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.63622	30.4	chromosome:NZ_CP010457.1/CP010457.1	-	1	1728	1569	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246054	GCA_001506925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/925/GCA_001506925.1_ASM150692v1	-	CJ677CC539
Campylobacter jejuni subsp. jejuni 1213	889230	PRJNA52885	52885	Proteobacteria	delta/epsilon subdivisions	1.64806	30.5	-	AIPG01	125	1732	1622	3/16/12	3/15/17	Contig	Cornell University	SAMN02429051	GCA_000254935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/935/GCA_000254935.2_ASM25493v2	-	1213
Yersinia pestis CMCC104003	755903	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.49477	47.7	-	ADQH01	1387	4354	3927	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403030	GCA_000323905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/905/GCA_000323905.1_ASM32390v1	23271803	CMCC104003
Listeria monocytogenes FSL J1-175	393118	PRJNA17301	17301	Terrabacteria group	Firmicutes	2.86648	37.9	-	AARK02	457	3137	2650	10/16/06	2/26/17	Contig	Broad Institute	SAMN02415200	GCA_000168415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/415/GCA_000168415.1_ASM16841v1	-	FSL J1-175
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.57432	32	-	LXRW01	72	2600	2475	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04942507	GCA_001658865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/865/GCA_001658865.1_ASM165886v1	-	LRKNS086
Bacillus cereus	1396	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.72578	34.9	-	LOMW01	87	5921	5639	3/9/16	3/27/17	Contig	Cornell University	SAMN03800018	GCA_001583685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/685/GCA_001583685.1_ASM158368v1	-	FSL K6-0043
Mycobacterium tuberculosis 2074CJ	1438843	PRJNA233358	233358	Terrabacteria group	Actinobacteria	4.49838	65.6	-	JKBN01	108	4433	4197	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02567706	GCA_000649235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/235/GCA_000649235.1_Myco_tube_2074CJ_V1	-	2074CJ
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.65705	30.4	chromosome:NZ_CP010458.1/CP010458.1	-	1	1759	1622	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246048	GCA_001506945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/945/GCA_001506945.1_ASM150694v1	-	CJ677CC533
Streptococcus pneumoniae EU-NP04	760880	PRJNA48953	48953	Terrabacteria group	Firmicutes	2.12319	39.8	-	AIKH01	12	2321	2017	3/7/12	3/8/17	Contig	Institute for Genome Sciences	SAMN00632907	GCA_000252305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/305/GCA_000252305.2_ASM25230v2	-	EU-NP04
Helicobacter pylori Hp H-4	992060	PRJNA64147	64147	Proteobacteria	delta/epsilon subdivisions	1.66509	39.1	-	AKOY01	9	1631	1478	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778902	GCA_000274145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/145/GCA_000274145.1_ASM27414v1	23661595	Hp H-4
Neisseria meningitidis 96024	1145135	PRJNA83483	83483	Proteobacteria	Betaproteobacteria	2.14265	51.9	-	APSV01	144	2491	2116	5/1/13	3/21/17	Contig	IGS	SAMN01780085	GCA_000386385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/385/GCA_000386385.2_ASM38638v2	-	96024
Streptococcus pyogenes ABC020056068	1439262	PRJNA233049	233049	Terrabacteria group	Firmicutes	1.83376	38.5	-	JJKB01	2	1884	1761	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567398	GCA_000628265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/265/GCA_000628265.1_Stre_pyog_ABC020056068_V1	-	ABC020056068
Leptospira interrogans serovar Copenhageni str. MMD1562	996863	PRJNA63829	63829	Spirochaetes	Spirochaetia	4.53604	35	-	AFLR01	538	4147	3693	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254372	GCA_000216395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/395/GCA_000216395.2_CLC_glsol194	-	MMD1562
Pseudomonas aeruginosa CF5	1402491	PRJNA219852	219852	Proteobacteria	Gammaproteobacteria	6.33792	66.5	-	AXRL01	5	5959	5706	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360663	GCA_000481885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/885/GCA_000481885.1_Pseu_aeru_CF5_V1	-	CF5
Acinetobacter baumannii AB_1649-8	1221249	PRJNA172660	172660	Proteobacteria	Gammaproteobacteria	3.78602	39	-	AMHF01	140	3625	3490	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471286	GCA_000301235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/235/GCA_000301235.1_ASM30123v1	-	AB_1649-8
Streptococcus agalactiae BSU174	1105234	PRJNA86321	86321	Terrabacteria group	Firmicutes	2.00236	35.3	-	ANEF01	33	2083	1965	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991134	GCA_000310625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/625/GCA_000310625.1_ASM31062v1	-	BSU174
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.07746	41.1	-	CEJJ01	63	2060	1967	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233982	GCA_000942855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/855/GCA_000942855.1_Velvet_assembly	-	S11I
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.06107	58.7	-	MTYT01	258	5890	5388	4/27/17	5/3/17	Scaffold	Massey University	SAMN06197077	GCA_002111835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/835/GCA_002111835.1_ASM211183v1	28369338	K4
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.35116	38.3	-	FJFZ01	26	3057	2949	2/20/16	3/27/17	Contig	SC	SAMEA2080605	GCA_900053385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/385/GCA_900053385.1_10625_2_8	-	2532STDY5467481
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.60484	50.8	-	FUDN01	360	5044	4413	1/28/17	2/26/17	Contig	SC	SAMEA1569792	GCA_900160475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/475/GCA_900160475.1_8403_8_79	-	sh1463
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.19989	67	-	MUWQ01	189	7890	7383	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05002006	GCA_001994395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/395/GCA_001994395.1_ASM199439v1	-	VC8865
Burkholderia pseudomallei MSHR5492	1435362	PRJNA231206	231206	Proteobacteria	Betaproteobacteria	7.17473	68.2	-	JQDO01	140	7452	6839	11/7/14	3/25/17	Contig	Los Alamos National Laboratory	SAMN02983238	GCA_000773255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/255/GCA_000773255.1_BFM	25676747	MSHR5492
Vibrio cholerae O1 str. 2009V-1116	1124475	PRJNA73589	73589	Proteobacteria	Gammaproteobacteria	4.01339	47.5	-	AHGA01	77	3798	3663	12/12/11	3/22/17	Contig	Public Health Agency of Canada	SAMN00765531	GCA_000237465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/465/GCA_000237465.2_ASM23746v2	22099115	2009V-1116
Clostridioides difficile P11	1151401	PRJNA85977	85977	Terrabacteria group	Firmicutes	4.05622	28.3	-	AVLT01	266	3745	3560	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766690	GCA_000451645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/645/GCA_000451645.2_ASM45164v2	-	P11
Vibrio parahaemolyticus S057	1394602	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.13232	45.2	-	AWLG01	606	4962	4720	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338916	GCA_000491075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/075/GCA_000491075.1_S057	-	S057
Klebsiella pneumoniae BIDMC 48	1400166	PRJNA219255	219255	Proteobacteria	Gammaproteobacteria	5.46083	57.3	-	JCMQ01	3	5420	5177	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02356587	GCA_000567105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/105/GCA_000567105.1_Kleb_pneu_BIDMC_48_V1	-	BIDMC 48
Enterococcus faecalis EnGen0245	1158626	PRJNA88879	88879	Terrabacteria group	Firmicutes	3.08671	37.3	-	AJBE01	8	3139	2969	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809132	GCA_000394235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/235/GCA_000394235.1_Ente_faec_T14_V1	-	T14
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14409	52.4	-	CQKH01	85	2501	2166	3/22/15	4/11/17	Contig	SC	SAMEA1690493	GCA_001172285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/285/GCA_001172285.1_8727_8_13	-	GCGS109
Enterococcus faecium EnGen0169	1157464	PRJNA88357	88357	Terrabacteria group	Firmicutes	2.71135	38.2	-	AIUQ01	15	2745	2580	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808996	GCA_000395665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/665/GCA_000395665.1_Ente_faec_UAA825_V1	-	UAA825
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.14669	41.2	-	CWBR01	83	2092	1907	6/24/15	3/26/17	Contig	SC	SAMEA1033010	GCA_001179025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/025/GCA_001179025.1_6903_4_71	-	EQUI0120
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.63524	30.4	chromosome:NZ_CP010459.1/CP010459.1	-	1	1722	1577	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246019	GCA_001506965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/965/GCA_001506965.1_ASM150696v1	-	CJ677CC047
Lactobacillus plantarum	1590	PRJNA343164	343164	Terrabacteria group	Firmicutes	3.23249	44.5	-	MKEH01	61	3132	2996	2/1/17	3/29/17	Scaffold	ETH Zurich	SAMN05717764	GCA_001982405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/405/GCA_001982405.1_ASM198240v1	-	RI-514
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.16887	60.1	-	FCMZ01	27	4887	4714	1/21/16	3/27/17	Scaffold	SC	SAMEA2274087	GCA_001538545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/545/GCA_001538545.1_12045_8_11	-	2880STDY5683017
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.76578	31.1	-	JOVV01	61	1826	1706	11/10/15	3/18/17	Contig	FDA	SAMN02693029	GCA_001442405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/405/GCA_001442405.1_Campylobacter_coli_CVM_N14840-R_v1.0	-	CVM N14840
Enterobacter cloacae	550	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.68302	55.6	-	NGRR01	2	4512	4296	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521851	GCA_002151935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/935/GCA_002151935.1_ASM215193v1	-	UCI101
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.90647	64.1	-	FVDI01	7	4911	4794	3/10/17	3/18/17	Contig	SC	SAMEA2070557	GCA_900131635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/635/GCA_900131635.1_10665_4_20	-	275
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.13482	67.5	-	LPIN01	108	6415	6089	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449565	GCA_001532455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/455/GCA_001532455.1_ASM153245v1	-	MSMB2191WGS
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.83448	55.2	-	LRCU01	156	4860	4484	1/19/16	3/27/17	Contig	JCVI	SAMN04407791	GCA_001518275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/275/GCA_001518275.1_ASM151827v1	-	GN04381
Pseudomonas sp. Leaf434	1736376	PRJNA297956	297956	Proteobacteria	Gammaproteobacteria	5.86803	60.1	-	LMQZ01	14	5306	5151	11/2/15	4/11/17	Contig	Max Planck Institute for Plant Breeding Research	SAMN04151766	GCA_001425545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/425/545/GCA_001425545.1_Leaf434	26633631	Leaf434
Actinosporangium sp. NRRL B-3428	1463820	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.56742	69.9	-	JOGW01	74	7561	7291	7/2/14	8/19/15	Contig	University of Illinois	SAMN02645465	GCA_000721375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/375/GCA_000721375.1_ASM72137v1	-	NRRL B-3428
Bacillus sp. FJAT-45066	2011010	PRJNA390022	390022	Terrabacteria group	Firmicutes	3.89961	36.1	-	NISQ01	3	-	-	9/21/17	9/23/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN07212119	GCA_002335755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/755/GCA_002335755.1_ASM233575v1	-	FJAT-45066
Staphylococcus sp. JGI 0001002-I23	1157683	PRJNA169804	169804	Terrabacteria group	Firmicutes	1.16617	35.3	-	AQWX01	183	-	-	4/20/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441062	GCA_000376205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/205/GCA_000376205.1_ASM37620v1	-	JGI 0001002-I23
Clostridium sp. UBA4948	1946365	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.41083	30.2	-	DHAS01	113	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450417	GCA_002398705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/705/GCA_002398705.1_ASM239870v1	28894102	-
Staphylococcus sp. MDS7B	1209359	PRJNA186611	186611	Terrabacteria group	Firmicutes	4.79179	31.7	-	AOTH01	308	-	-	5/2/13	1/8/14	Contig	West bengal University of Technology	SAMN02472122	GCA_000387985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/985/GCA_000387985.1_Ac7Bver1	-	MDS7B
Bacillus sp. FJAT-45350	2011014	PRJNA390037	390037	Terrabacteria group	Firmicutes	4.30159	36.1	-	NISU01	15	-	-	9/21/17	9/23/17	Scaffold	Fujian Academy of Agricultural Sciences	SAMN07212143	GCA_002335805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/805/GCA_002335805.1_ASM233580v1	-	FJAT-45350
Streptomyces sp. NRRL F-5702	1463870	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.03214	72.6	-	JOHD01	152	7041	6678	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645472	GCA_000721415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/415/GCA_000721415.1_ASM72141v1	-	NRRL F-5702
Pseudomonas sp. DSM 29142	2015502	PRJNA274345	274345	Proteobacteria	Gammaproteobacteria	6.73032	59.5	-	JYLP01	60	6278	6009	11/6/15	6/30/17	Contig	"Zentralinstitut fuer Ernaehrungs- und Lebensmittelforschung (ZIEL), WZW, TUM"	SAMN03332053	GCA_001439745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/745/GCA_001439745.1_MG775	26675012	DSM 29142
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.82526	55.1	-	LRCS01	133	4836	4501	1/19/16	3/27/17	Contig	JCVI	SAMN04407789	GCA_001518325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/325/GCA_001518325.1_ASM151832v1	-	GN04366
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.13556	67.5	-	LPIP01	97	6418	6091	1/22/16	6/26/17	Contig	Northern Arizona University	SAMN03449567	GCA_001532465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/465/GCA_001532465.1_ASM153246v1	-	MSMB2193WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.13037	64.2	-	FSAR01	13	5129	5007	12/14/16	3/21/17	Contig	SC	SAMEA2071362	GCA_900131645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/645/GCA_900131645.1_10665_4_22	-	277
Enterobacter cloacae	550	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.92126	55	-	NGRP01	5	4789	4576	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521927	GCA_002151955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/955/GCA_002151955.1_ASM215195v1	-	MGH178
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.91076	30.9	-	JOUN01	97	2021	1881	11/10/15	3/18/17	Contig	FDA	SAMN02693024	GCA_001442435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/435/GCA_001442435.1_Campylobacter_coli_CVM_N26070_v1.0	-	CVM N26070
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.28507	59.8	-	FCMA01	33	5027	4865	1/21/16	3/27/17	Scaffold	SC	SAMEA2274076	GCA_001538565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/565/GCA_001538565.1_12082_3_96	-	2880STDY5683004
Lactobacillus plantarum	1590	PRJNA392920	392920	Terrabacteria group	Firmicutes	3.30193	44.4	-	NKRH01	36	3238	3040	7/27/17	8/1/17	Scaffold	ICBFM SB RAS	SAMN07312274	GCA_002234395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/234/395/GCA_002234395.1_ASM223439v1	-	8 PA 3
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.63261	30.4	chromosome:NZ_CP010460.1/CP010460.1	-	1	1720	1584	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246021	GCA_001506985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/985/GCA_001506985.1_ASM150698v1	-	CJ677CC058
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12582	41.2	-	CVYK01	79	2057	1876	6/23/15	3/26/17	Contig	SC	SAMEA1033011	GCA_001179045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/045/GCA_001179045.1_6830_4_76	-	EQUI0221
Enterococcus faecium EnGen0170	1157465	PRJNA88359	88359	Terrabacteria group	Firmicutes	2.90296	37.9	-	AIUU01	53	2960	2772	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808997	GCA_000395685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/685/GCA_000395685.1_Ente_faec_UAA944_V1	-	UAA944
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14497	52.4	-	CQML01	80	2508	2193	3/23/15	4/10/17	Contig	SC	SAMEA1690444	GCA_001173185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/185/GCA_001173185.1_8289_2_23	-	GCGS023
Enterococcus faecalis EnGen0246	1158627	PRJNA88881	88881	Terrabacteria group	Firmicutes	3.18699	37.4	-	AJBF01	10	3289	3096	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809133	GCA_000394255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/255/GCA_000394255.1_Ente_faec_CH19_V1	-	CH19
Klebsiella pneumoniae BIDMC 47	1400165	PRJNA219254	219254	Proteobacteria	Gammaproteobacteria	5.33724	57.4	-	JCMR01	8	5323	5041	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02356586	GCA_000567125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/125/GCA_000567125.1_Kleb_pneu_BIDMC_47_V1	-	BIDMC 47
Vibrio parahaemolyticus S056	1394601	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.26493	45.2	-	AWLH01	865	5323	4762	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338915	GCA_000491095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/095/GCA_000491095.1_S056	-	S056
Clostridioides difficile P13	1151402	PRJNA85979	85979	Terrabacteria group	Firmicutes	4.02145	28.4	-	AVLU01	42	3723	3581	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766691	GCA_000451665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/665/GCA_000451665.2_ASM45166v2	-	P13
Vibrio cholerae O1 str. 2009V-1131	1124471	PRJNA73589	73589	Proteobacteria	Gammaproteobacteria	4.01068	47.5	-	AHGB01	94	3812	3640	12/12/11	3/22/17	Contig	Public Health Agency of Canada	SAMN00765532	GCA_000237485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/485/GCA_000237485.2_ASM23748v2	22099115	2009V-1131
Burkholderia pseudomallei MSHR4378	1435364	PRJNA231200	231200	Proteobacteria	Betaproteobacteria	7.16113	68.1	-	JQDP01	168	7449	6817	11/7/14	3/25/17	Contig	Los Alamos National Laboratory	SAMN02983244	GCA_000773275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/275/GCA_000773275.1_BFK	25676747	MSHR4378
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.28791	67	-	MUWR01	217	7965	7461	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05002007	GCA_001994405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/405/GCA_001994405.1_ASM199440v1	-	VC9272
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.84173	50.5	-	FUDT01	398	5408	4615	1/28/17	2/26/17	Contig	SC	SAMEA1569801	GCA_900160485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/485/GCA_900160485.1_8403_8_84	-	sh1468
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.41361	38.3	-	FJGB01	23	3118	3013	2/20/16	3/27/17	Contig	SC	SAMEA2077487	GCA_900053395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/395/GCA_900053395.1_10625_2_9	-	2532STDY5467482
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.10797	58.7	-	MTYV01	270	5928	5416	4/27/17	5/3/17	Scaffold	Massey University	SAMN06197079	GCA_002111865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/865/GCA_002111865.1_ASM211186v1	28369338	K6
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.12222	41.1	-	CEEE01	129	2151	2009	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233922	GCA_000942875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/875/GCA_000942875.1_Velvet_assembly	-	LS4Q
Streptococcus agalactiae MRI Z1-198	1154835	PRJNA86329	86329	Terrabacteria group	Firmicutes	2.04925	35.2	-	ANEG01	25	2106	2005	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993779	GCA_000310645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/645/GCA_000310645.1_ASM31064v1	-	MRI Z1-198
Acinetobacter baumannii AB_1650-8	1221250	PRJNA172661	172661	Proteobacteria	Gammaproteobacteria	3.79174	39	-	AMHG01	133	3640	3498	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471224	GCA_000301255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/255/GCA_000301255.1_ASM30125v1	-	AB_1650-8
Pseudomonas aeruginosa CF27	1402490	PRJNA219851	219851	Proteobacteria	Gammaproteobacteria	6.5356	66.2	-	AXRM01	5	6126	5927	10/24/13	3/9/17	Scaffold	Broad Institute	SAMN02360662	GCA_000481905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/905/GCA_000481905.1_Pseu_aeru_CF27_V1	-	CF27
Leptospira interrogans serovar Canicola str. HAI0024	996809	PRJNA63827	63827	Spirochaetes	Spirochaetia	4.71096	35	-	AFLQ01	338	4273	3876	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254369	GCA_000216415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/415/GCA_000216415.2_CLC_glsol192	-	HAI0024
Streptococcus pyogenes ABC020059502	1439289	PRJNA233053	233053	Terrabacteria group	Firmicutes	1.82978	38.5	-	JJKC01	2	1878	1754	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567402	GCA_000628285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/285/GCA_000628285.1_Stre_pyog_ABC020059502_V1	-	ABC020059502
Neisseria meningitidis 97008	1145136	PRJNA83485	83485	Proteobacteria	Betaproteobacteria	2.19749	51.9	-	APSW01	132	2532	2162	5/1/13	3/21/17	Contig	IGS	SAMN01780086	GCA_000386405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/405/GCA_000386405.2_ASM38640v2	-	97008
Helicobacter pylori Hp H-23	992068	PRJNA64163	64163	Proteobacteria	delta/epsilon subdivisions	1.64806	39.1	-	AKPG01	9	1619	1468	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778865	GCA_000274165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/165/GCA_000274165.1_ASM27416v1	23661595	Hp H-23
Streptococcus pneumoniae SV36	497739	PRJNA28499	28499	Terrabacteria group	Firmicutes	2.15637	39.5	-	ADNO01	9	2348	2078	3/27/12	3/15/17	Contig	Center for Genomic Sciences	SAMN02393735	GCA_000256645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/645/GCA_000256645.1_ASM25664v1	-	SV36
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.62454	30.4	chromosome:NZ_CP010465.1/CP010465.1	-	1	1709	1575	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246004	GCA_001507085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/085/GCA_001507085.1_ASM150708v1	-	CJ677CC008
Mycobacterium tuberculosis 2230BH	1438860	PRJNA233359	233359	Terrabacteria group	Actinobacteria	4.48152	65.6	-	JKBM01	119	4435	4197	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02567707	GCA_000649255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/255/GCA_000649255.1_Myco_tube_2230BH_V1	-	2230BH
Bacillus cereus	1396	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.76829	35.1	-	LOMQ01	168	6113	5773	3/9/16	3/27/17	Contig	Cornell University	SAMN03800024	GCA_001583705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/705/GCA_001583705.1_ASM158370v1	-	FSL W8-0003
Staphylococcus epidermidis	1282	PRJNA319642	319642	Terrabacteria group	Firmicutes	2.46357	32.1	-	LYRX01	123	2470	2286	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04962397	GCA_001658885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/885/GCA_001658885.1_ASM165888v1	-	ALKB06
Listeria monocytogenes FSL J2-071	393121	PRJNA17307	17307	Terrabacteria group	Firmicutes	2.85371	38.1	-	AARN04	53	2881	2633	10/13/06	4/21/17	Contig	Broad Institute	SAMN02415202	GCA_000168475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/475/GCA_000168475.1_ASM16847v1	-	FSL J2-071
Yersinia pestis CMCC106002	755904	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.42459	47.8	-	ADQI01	1176	4152	3902	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403031	GCA_000323925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/925/GCA_000323925.1_ASM32392v1	23271803	CMCC106002
Campylobacter jejuni subsp. jejuni 1577	889231	PRJNA52887	52887	Proteobacteria	delta/epsilon subdivisions	1.70366	30.3	-	AIPH01	170	1821	1700	3/16/12	3/15/17	Contig	Cornell University	SAMN02428996	GCA_000254955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/955/GCA_000254955.2_ASM25495v2	-	1577
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.63419	30.4	chromosome:NZ_CP010466.1/CP010466.1	-	1	1717	1573	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246056	GCA_001507105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/105/GCA_001507105.1_ASM150710v1	-	CJ677CC541
Staphylococcus aureus HIF003_B2N-C	1156998	PRJNA88553	88553	Terrabacteria group	Firmicutes	2.75689	32.8	-	AIVK01	2	2870	2722	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00792167	GCA_000359925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/925/GCA_000359925.1_Stap_aure_HIF003_B2N-C_V1	-	HIF003_B2N-C
Staphylococcus aureus M0001	1157004	PRJNA88565	88565	Terrabacteria group	Firmicutes	2.88225	32.8	-	AIVQ01	25	3044	2882	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792128	GCA_000359945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/945/GCA_000359945.1_Stap_aure_M0001_V1	-	M0001
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.63571	30.4	chromosome:NZ_CP010470.1/CP010470.1	-	1	1724	1581	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246011	GCA_001507185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/185/GCA_001507185.1_ASM150718v1	-	CJ677CC026
Campylobacter jejuni subsp. jejuni 1798	889232	PRJNA52889	52889	Proteobacteria	delta/epsilon subdivisions	1.60281	30.4	-	AIPI01	106	1706	1581	3/16/12	3/15/17	Contig	Cornell University	SAMN02428997	GCA_000254975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/975/GCA_000254975.2_ASM25497v2	-	1798
Yersinia pestis CMCC11001	755906	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.42335	47.9	-	ADQK01	1100	4225	3946	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403033	GCA_000323965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/965/GCA_000323965.1_ASM32396v1	23271803	CMCC11001
Listeria monocytogenes FSL N1-017	393123	PRJNA17311	17311	Terrabacteria group	Firmicutes	3.14206	37.8	-	AARP04	79	3239	3144	10/16/06	2/26/17	Contig	Broad Institute	SAMN02415204	GCA_000168515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/515/GCA_000168515.1_ASM16851v1	-	FSL N1-017
Staphylococcus epidermidis	1282	PRJNA319642	319642	Terrabacteria group	Firmicutes	2.51176	32	-	LYRW01	73	2516	2348	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04962390	GCA_001658895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/895/GCA_001658895.1_ASM165889v1	-	Ae-e06
Bacillus cereus	1396	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.76922	35	-	LOMS01	108	6137	5864	3/9/16	3/27/17	Contig	Cornell University	SAMN03800027	GCA_001583745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/745/GCA_001583745.1_ASM158374v1	-	FSL W8-0268
Mycobacterium tuberculosis 2229BH	1438859	PRJNA233360	233360	Terrabacteria group	Actinobacteria	4.43517	65.6	-	JKBL01	123	4386	4144	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02567708	GCA_000649275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/275/GCA_000649275.1_Myco_tube_2229BH_V1	-	2229BH
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.63721	30.4	chromosome:NZ_CP010484.1/CP010484.1	-	1	1723	1575	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246014	GCA_001507205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/205/GCA_001507205.1_ASM150720v1	-	CJ677CC034
Streptococcus pneumoniae 459-5	497980	PRJNA28525	28525	Terrabacteria group	Firmicutes	2.16919	39.4	-	ABXO01	47	2363	2136	3/27/12	3/8/17	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393736	GCA_000256665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/665/GCA_000256665.1_ASM25666v1	-	459-5
Helicobacter pylori Hp H-21	992067	PRJNA64161	64161	Proteobacteria	delta/epsilon subdivisions	1.62367	39.2	-	AKPF01	6	1590	1442	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778855	GCA_000274185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/185/GCA_000274185.2_ASM27418v2	23661595	Hp H-21
Neisseria meningitidis 98005	1145137	PRJNA83487	83487	Proteobacteria	Betaproteobacteria	2.1473	51.9	-	APSX01	140	2490	2102	5/1/13	3/21/17	Contig	IGS	SAMN01780087	GCA_000386425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/425/GCA_000386425.2_ASM38642v2	-	98005
Streptococcus pyogenes ABC020061424	1439303	PRJNA233057	233057	Terrabacteria group	Firmicutes	1.8313	38.5	-	JJKD01	2	1880	1754	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567406	GCA_000628305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/305/GCA_000628305.1_Stre_pyog_ABC020061424_V1	-	ABC020061424
Leptospira interrogans serovar Copenhageni str. HAI0156	996862	PRJNA63825	63825	Spirochaetes	Spirochaetia	4.62738	34.9	-	AFLP01	437	4183	3762	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254371	GCA_000216435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/435/GCA_000216435.2_CLC_glsol191	-	HAI0156
Pseudomonas aeruginosa CF18	1402489	PRJNA219850	219850	Proteobacteria	Gammaproteobacteria	6.49201	66.3	-	AXRN01	6	6161	6026	10/24/13	3/9/17	Scaffold	Broad Institute	SAMN02360661	GCA_000481925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/925/GCA_000481925.1_Pseu_aeru_CF18_V1	-	CF18
Acinetobacter baumannii AB_1766_8	1221251	PRJNA172662	172662	Proteobacteria	Gammaproteobacteria	4.01053	39	-	AMJO01	222	3877	3720	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471246	GCA_000301275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/275/GCA_000301275.1_ASM30127v1	-	AB_1766_8
Streptococcus agalactiae MRI Z1-199	1154836	PRJNA86331	86331	Terrabacteria group	Firmicutes	2.02446	35.4	-	ANEH01	25	2080	1961	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993455	GCA_000310665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/665/GCA_000310665.1_ASM31066v1	-	MRI Z1-199
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.19459	41	-	CEGY01	72	2208	2054	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234092	GCA_000942935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/935/GCA_000942935.1_Velvet_assembly	-	S97A
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.23127	58.5	-	MTYU01	313	6110	5468	4/27/17	5/3/17	Scaffold	Massey University	SAMN06197078	GCA_002111875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/875/GCA_002111875.1_ASM211187v1	28369338	K5
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.34832	38.3	-	FJHI01	25	3051	2944	2/20/16	3/27/17	Contig	SC	SAMEA2077488	GCA_900053405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/405/GCA_900053405.1_10625_2_12	-	2532STDY5467485
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.83266	50.4	-	FUDR01	400	5422	4605	1/28/17	2/26/17	Contig	SC	SAMEA1569818	GCA_900160515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/515/GCA_900160515.1_8403_8_83	-	sh1467
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.934	67.1	-	MUVZ01	142	7606	7219	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001988	GCA_001994435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/435/GCA_001994435.1_ASM199443v1	-	VC7933
Burkholderia pseudomallei MSHR4868	1435363	PRJNA231201	231201	Proteobacteria	Betaproteobacteria	7.15011	68.2	-	JQGZ01	146	7424	6811	11/7/14	3/25/17	Contig	Los Alamos National Laboratory	SAMN03002109	GCA_000773295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/295/GCA_000773295.1_BFL	25676747	MSHR4868
Vibrio cholerae O1 str. 2010EL-1749	1124468	PRJNA73589	73589	Proteobacteria	Gammaproteobacteria	4.00949	47.5	-	AHGC01	159	3846	3648	12/12/11	3/22/17	Contig	Public Health Agency of Canada	SAMN00765533	GCA_000237505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/505/GCA_000237505.2_ASM23750v2	22099115	2010EL-1749
Clostridioides difficile P15	1151403	PRJNA85981	85981	Terrabacteria group	Firmicutes	4.05468	28.3	-	AVLV01	36	3738	3534	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766692	GCA_000451685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/685/GCA_000451685.2_ASM45168v2	-	P15
Vibrio parahaemolyticus S055	1394600	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.05216	45.3	-	AWLI01	448	4845	4640	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338914	GCA_000491115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/115/GCA_000491115.1_S055	-	S055
Klebsiella pneumoniae BIDMC 46b	1400164	PRJNA219253	219253	Proteobacteria	Gammaproteobacteria	5.29241	57.5	-	JCMS01	2	5242	5030	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02356585	GCA_000567145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/145/GCA_000567145.1_Kleb_pneu_BIDMC_46b_V1	-	BIDMC 46b
Enterococcus faecalis EnGen0247	1158628	PRJNA88883	88883	Terrabacteria group	Firmicutes	3.28481	37.2	-	AJBG01	34	3419	3215	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809134	GCA_000394275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/275/GCA_000394275.1_Ente_faec_WH257_V1	-	WH257
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14198	52.4	-	CQKK01	81	2498	2189	3/22/15	4/10/17	Contig	SC	SAMEA1690484	GCA_001173445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/445/GCA_001173445.1_8289_2_93	-	GCGS093
Enterococcus faecium EnGen0171	1157466	PRJNA88361	88361	Terrabacteria group	Firmicutes	2.73783	38	-	AIUW01	13	2725	2572	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808998	GCA_000395705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/705/GCA_000395705.1_Ente_faec_VAN_219_V1	-	VAN 219
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15308	41.1	-	CVZS01	74	2086	1923	6/23/15	3/26/17	Contig	SC	SAMEA1033013	GCA_001179065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/065/GCA_001179065.1_6903_3_26	-	EQUI0075
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.62979	30.4	chromosome:NZ_CP010485.1/CP010485.1	-	1	1718	1576	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246029	GCA_001507225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/225/GCA_001507225.1_ASM150722v1	-	CJ677CC086
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.3884	59.8	-	FCLD01	22	5138	4970	1/21/16	3/27/17	Scaffold	SC	SAMEA2274051	GCA_001538585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/585/GCA_001538585.1_12082_3_75	-	2880STDY5682979
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.68948	31.3	-	JOVX01	87	1744	1654	11/10/15	3/18/17	Contig	FDA	SAMN02693045	GCA_001442455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/455/GCA_001442455.1_Campylobacter_coli_CVM_N20320-R_v1.0	-	CVM N20320
Enterobacter cloacae	550	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.82563	55.5	-	NGRQ01	3	4572	4376	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521933	GCA_002151965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/965/GCA_002151965.1_ASM215196v1	-	MGH184
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.90707	64.1	-	FVCX01	6	4910	4794	3/10/17	3/18/17	Contig	SC	SAMEA2070653	GCA_900131655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/655/GCA_900131655.1_10665_4_23	-	278
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.71611	67.1	-	LPIR01	144	7044	6652	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449569	GCA_001532505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/505/GCA_001532505.1_ASM153250v1	-	MSMB2162WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.19211	55	-	LRCZ01	193	5206	4827	1/19/16	3/27/17	Contig	JCVI	SAMN04407796	GCA_001518415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/415/GCA_001518415.1_ASM151841v1	-	GN05792
Pseudomonas sp. TTU2014-066ASC	1729723	PRJNA296464	296464	Proteobacteria	Gammaproteobacteria	4.31398	63.1	-	LKKJ01	74	4081	3873	11/19/15	4/11/17	Contig	Texas Tech University	SAMN04099671	GCA_001446915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/915/GCA_001446915.1_ASM144691v1	26824353	TTU2014-066ASC
Streptomyces sp. NRRL F-5527	1463862	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.78745	72.5	-	JOHL01	199	7108	6717	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645480	GCA_000721435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/435/GCA_000721435.1_ASM72143v1	-	NRRL F-5527
Bacillus sp. v-76	1761769	PRJEB15029	336291	Terrabacteria group	Firmicutes	4.11419	37.7	-	FMBD01	146	4344	4009	8/3/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487804	GCA_900094875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/875/GCA_900094875.1_IMG-taxon_2617270740_annotated_assembly	-	V-76
Staphylococcus sp. DORA_6_22	1403935	PRJNA221493	221493	Terrabacteria group	Firmicutes	1.49067	31.8976	plasmid pSAPLB_DORA_A_5_14_21:AZME01000385.1	AZME01	385	1603	1603	12/16/13	12/16/13	Contig	"University of California, Berkeley"	SAMN02316559	GCA_000508745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/745/GCA_000508745.1_Stp_DORA_6_22_velvet_1.1	-	-
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.55064	47.7	-	FMEF01	43	3368	3297	8/16/16	8/16/16	Scaffold	SC	SAMEA2393089	GCA_900066055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/055/GCA_900066055.1_12718_7_92	-	-
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.27096	43	-	FMDQ01	49	3118	3060	8/16/16	8/16/16	Scaffold	SC	SAMEA2393091	GCA_900066075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/075/GCA_900066075.1_12718_7_94	-	-
Staphylococcus sp. AOAB	1690269	PRJNA322390	322390	Terrabacteria group	Firmicutes	2.54374	31.8	-	LZFL01	1103	2607	2139	8/23/16	8/23/16	Contig	Auburn University	SAMN05161927	GCA_001709225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/225/GCA_001709225.1_ASM170922v1	-	AOAB
Bacillus sp. nio-1130	1761765	PRJEB15025	336295	Terrabacteria group	Firmicutes	3.61506	41.3	-	FMAS01	23	3777	3642	8/3/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487803	GCA_900094985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/985/GCA_900094985.1_IMG-taxon_2615840606_annotated_assembly	-	NIO-1130
Acinetobacter sp. UBA3450	1945938	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.91571	42.1	-	DFRZ01	211	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453743	GCA_002378405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/405/GCA_002378405.1_ASM237840v1	28894102	-
Streptomyces sp. NRRL F-5053	1463854	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.82567	73	-	JOHT01	167	7231	6847	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645488	GCA_000721445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/445/GCA_000721445.1_ASM72144v1	-	NRRL F-5053
Pseudomonas sp. TTU2014-080ASC	1729724	PRJNA296464	296464	Proteobacteria	Gammaproteobacteria	4.52271	56.7	-	LKKK01	18	4178	4057	11/19/15	4/11/17	Contig	Texas Tech University	SAMN04099672	GCA_001446935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/935/GCA_001446935.1_ASM144693v1	26824353	TTU2014-080ASC
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.78985	55.4	-	LRBZ01	130	4762	4445	1/19/16	3/27/17	Contig	JCVI	SAMN04407766	GCA_001518515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/515/GCA_001518515.1_ASM151851v1	-	GN02002
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.87746	67.2	-	LPIU01	98	7218	6860	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449572	GCA_001532545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/545/GCA_001532545.1_ASM153254v1	-	MSMB2185WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.91301	64.1	-	FSAT01	9	4848	4741	12/14/16	3/21/17	Contig	SC	SAMEA2071363	GCA_900131665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/665/GCA_900131665.1_10665_4_25	-	280
Enterobacter cloacae	550	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.05826	54.7	-	NGRS01	5	4923	4673	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521852	GCA_002152055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/055/GCA_002152055.1_ASM215205v1	-	UCI102
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.63841	31.4	-	FBHU01	15	1691	1596	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683274	GCA_001487185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/185/GCA_001487185.1_CCN178	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.21973	59.7	-	FCFF01	23	5020	4852	1/21/16	3/27/17	Scaffold	SC	SAMEA2273895	GCA_001538605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/605/GCA_001538605.1_12082_2_30	-	2880STDY5682822
Lactobacillus plantarum 2165	1385855	PRJNA213979	213979	Terrabacteria group	Firmicutes	3.17997	44.5	-	AVFI01	192	3322	3108	9/13/13	3/6/14	Contig	Kingston Uniiversity	SAMN02298725	GCA_000466845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/845/GCA_000466845.1_ASM46684v1	24407651	2165
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.62891	30.4	chromosome:NZ_CP010486.1/CP010486.1	-	1	1713	1573	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246032	GCA_001507245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/245/GCA_001507245.1_ASM150724v1	-	CJ677CC095
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.10605	41.2	-	CVXF01	80	2043	1857	6/24/15	3/26/17	Contig	SC	SAMEA1033014	GCA_001179085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/085/GCA_001179085.1_6817_1_51	-	EQUI0004
Enterococcus faecium EnGen0172	1157467	PRJNA88363	88363	Terrabacteria group	Firmicutes	2.75537	38	-	AIUX01	16	2750	2575	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808999	GCA_000395725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/725/GCA_000395725.1_Ente_faec_VAN_222_V1	-	VAN 222
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.16659	52.4	-	CHZW01	76	2550	2229	4/21/15	4/11/17	Contig	SC	SAMEA1677347	GCA_001319085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/085/GCA_001319085.1_8727_5_90	-	GCGS240
Enterococcus faecalis EnGen0248	1158629	PRJNA88885	88885	Terrabacteria group	Firmicutes	3.1999	37.3	-	AJBH01	21	3319	3140	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809135	GCA_000394295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/295/GCA_000394295.1_Ente_faec_SF19_V1	-	SF19
Klebsiella pneumoniae BIDMC 46a	1400163	PRJNA219252	219252	Proteobacteria	Gammaproteobacteria	5.62415	56.9	-	JCMT01	6	5642	5329	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02356584	GCA_000567165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/165/GCA_000567165.1_Kleb_pneu_BIDMC_46a_V1	-	BIDMC 46a
Vibrio parahaemolyticus S054	1394599	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.18095	45.2	-	AWLJ01	684	5146	4691	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338913	GCA_000491135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/135/GCA_000491135.1_S054	-	S054
Clostridioides difficile P19	1151404	PRJNA85983	85983	Terrabacteria group	Firmicutes	4.18494	28.7	-	AVLW01	65	3926	3709	8/20/13	3/15/17	Contig	Institute for Genome Sciences	SAMN01766693	GCA_000451705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/705/GCA_000451705.1_ASM45170v1	-	P19
Vibrio cholerae O1 str. 2010EL-1961	1124480	PRJNA73589	73589	Proteobacteria	Gammaproteobacteria	4.00416	47.5	-	AHGD01	96	3802	3651	12/12/11	3/22/17	Contig	Public Health Agency of Canada	SAMN00765534	GCA_000237525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/525/GCA_000237525.2_ASM23752v2	22099115	2010EL-1961
Burkholderia pseudomallei MSHR7527	1435371	PRJNA231180	231180	Proteobacteria	Betaproteobacteria	7.26948	68.2	-	JPWS01	75	7529	6930	11/7/14	3/25/17	Contig	Los Alamos National Laboratory	SAMN02953888	GCA_000773305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/305/GCA_000773305.1_BCW_40	25676747	MSHR7527
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.37223	67	-	MUWT01	235	8028	7503	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05002009	GCA_001994445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/445/GCA_001994445.1_ASM199444v1	-	VC10022
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.60457	50.9	-	FUDW01	352	5106	4409	1/28/17	2/26/17	Contig	SC	SAMEA1569759	GCA_900160565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/565/GCA_900160565.1_8403_8_89	-	sh1473
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54044	38.3	-	FJJV01	64	3237	3088	2/20/16	3/27/17	Contig	SC	SAMEA2077788	GCA_900053425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/425/GCA_900053425.1_10625_3_4	-	2532STDY5467573
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.28427	58.5	-	MTYX01	330	6089	5505	4/27/17	5/3/17	Scaffold	Massey University	SAMN06197081	GCA_002111925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/925/GCA_002111925.1_ASM211192v1	28369338	NZ35
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03703	41.2	-	CEIJ01	62	2018	1920	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233994	GCA_000942995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/995/GCA_000942995.1_Velvet_assembly	-	S12U
Streptococcus agalactiae MRI Z1-022	1154864	PRJNA86387	86387	Terrabacteria group	Firmicutes	2.22581	35.4	-	ANEM01	76	2336	2174	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993345	GCA_000310685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/685/GCA_000310685.1_ASM31068v1	-	MRI Z1-022
Acinetobacter baumannii AB_2007-16-25-01-7	1221253	PRJNA172664	172664	Proteobacteria	Gammaproteobacteria	3.96144	38.8	-	AMHI01	81	3809	3662	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471225	GCA_000301295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/295/GCA_000301295.1_ASM30129v1	-	AB_2007-16-25-01-7
Pseudomonas aeruginosa CF127	1402488	PRJNA219849	219849	Proteobacteria	Gammaproteobacteria	7.03198	65.9	-	AXRO01	7	6621	6432	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360660	GCA_000481945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/945/GCA_000481945.1_Pseu_aeru_CF127_V1	-	CF127
Leptospira interrogans serovar Copenhageni str. R066	996861	PRJNA63821	63821	Spirochaetes	Spirochaetia	4.54993	35	-	AFLN01	285	4050	3733	6/7/11	5/18/17	Scaffold	J. Craig Venter Institute	SAMN00254367	GCA_000216475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/475/GCA_000216475.2_CLC_glsol165	-	R066
Streptococcus pyogenes ABC020005716	1438989	PRJNA233104	233104	Terrabacteria group	Firmicutes	1.82991	38.5	-	JJKE01	2	1878	1756	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567453	GCA_000628325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/325/GCA_000628325.1_Stre_pyog_ABC020005716_V1	-	ABC020005716
Neisseria meningitidis 2004085	1145138	PRJNA83489	83489	Proteobacteria	Betaproteobacteria	2.18555	52	-	APSY01	133	2514	2163	5/1/13	3/21/17	Contig	IGS	SAMN01780088	GCA_000386445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/445/GCA_000386445.2_ASM38644v2	-	2004085
Helicobacter pylori Hp P-11	992078	PRJNA64183	64183	Proteobacteria	delta/epsilon subdivisions	1.68912	39.1	-	AKPN01	11	1696	1506	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778883	GCA_000274205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/205/GCA_000274205.2_ASM27420v2	23661595	Hp P-11
Streptococcus pneumoniae SV35	497738	PRJNA28497	28497	Terrabacteria group	Firmicutes	2.16179	39.4	-	ADNN01	11	2326	2092	3/27/12	3/8/17	Contig	Center for Genomic Sciences	SAMN02393734	GCA_000256685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/685/GCA_000256685.1_ASM25668v1	-	SV35
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.63395	30.4	chromosome:NZ_CP010487.1/CP010487.1	-	1	1721	1581	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246006	GCA_001507265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/265/GCA_001507265.1_ASM150726v1	-	CJ677CC012
Mycobacterium tuberculosis 2228BH	1438858	PRJNA233361	233361	Terrabacteria group	Actinobacteria	4.41948	65.6	-	JKBK01	98	4352	4143	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02567709	GCA_000649295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/295/GCA_000649295.1_Myco_tube_2228BH_V1	-	2228BH
Bacillus cereus	1396	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.87703	34.9	-	LOBA01	137	6172	5814	3/9/16	3/27/17	Contig	Cornell University	SAMN03800016	GCA_001583755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/755/GCA_001583755.1_ASM158375v1	-	FSL H8-0488
Staphylococcus epidermidis	1282	PRJNA319642	319642	Terrabacteria group	Firmicutes	2.50255	32	-	LYRY01	78	2485	2340	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04962399	GCA_001658905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/905/GCA_001658905.1_ASM165890v1	-	Lt3p20
Listeria monocytogenes FSL N3-165	393124	PRJNA17313	17313	Terrabacteria group	Firmicutes	2.88408	37.8	-	AARQ02	39	2910	2822	10/16/06	2/26/17	Contig	Broad Institute	SAMN02415205	GCA_000168535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/535/GCA_000168535.1_ASM16853v1	-	FSL N3-165
Yersinia pestis CMCC114001	755908	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.23152	48.2	-	ADQL01	1664	4003	3614	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403034	GCA_000323985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/985/GCA_000323985.1_ASM32398v1	23271803	CMCC114001
Campylobacter jejuni subsp. jejuni 1854	889233	PRJNA52891	52891	Proteobacteria	delta/epsilon subdivisions	1.62251	30.4	-	AIPJ01	110	1690	1573	3/16/12	3/15/17	Contig	Cornell University	SAMN02428998	GCA_000254995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/254/995/GCA_000254995.2_ASM25499v2	-	1854
Campylobacter jejuni subsp. jejuni	32022	PRJNA266759	266759	Proteobacteria	delta/epsilon subdivisions	1.74205	30.4	chromosome:NZ_CP010306.1/CP010306.1	-	1	1820	1696	2/10/15	3/16/17	Complete Genome	Public Health Agency of Canada	SAMN03216760	GCA_000835285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/835/285/GCA_000835285.1_ASM83528v1	-	00-1597
Staphylococcus aureus M0006	1158507	PRJNA88921	88921	Terrabacteria group	Firmicutes	2.94185	33	-	AJBY01	10	3071	2911	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809157	GCA_000359965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/965/GCA_000359965.1_Stap_aure_M0006_V1	-	M0006
Staphylococcus aureus M0029	1157005	PRJNA88567	88567	Terrabacteria group	Firmicutes	2.89189	32.9	-	AIVR01	3	3037	2870	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792129	GCA_000359985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/985/GCA_000359985.1_Stap_aure_M0029_V1	-	M0029
Campylobacter jejuni subsp. jejuni R14	1295010	PRJNA189664	189664	Proteobacteria	delta/epsilon subdivisions	1.79586	30.4	chromosome:NZ_CP005081.1/CP005081.1	-	1	1953	1767	4/15/14	4/17/17	Complete Genome	University of Nottingham	SAMN02743813	GCA_000632435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/435/GCA_000632435.1_ASM63243v1	-	R14
Campylobacter jejuni subsp. jejuni 1893	889234	PRJNA52893	52893	Proteobacteria	delta/epsilon subdivisions	1.62643	30.4	-	AIPK01	101	1719	1611	3/16/12	3/15/17	Contig	Cornell University	SAMN02428965	GCA_000255015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/015/GCA_000255015.2_ASM25501v2	23279811	1893
Yersinia pestis CMCC12003	755909	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.34143	47.8	-	ADQM01	1045	4167	3848	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403035	GCA_000324005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/005/GCA_000324005.1_ASM32400v1	23271803	CMCC12003
Listeria monocytogenes FSL R2-503	393125	PRJNA17315	17315	Terrabacteria group	Firmicutes	2.99149	37.8	-	AARR02	55	3043	2835	10/13/06	2/26/17	Contig	Broad Institute	SAMN00761062	GCA_000168555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/555/GCA_000168555.1_ASM16855v1	-	FSL R2-503
Staphylococcus epidermidis	1282	PRJNA319642	319642	Terrabacteria group	Firmicutes	2.53023	31.9	-	LYRZ01	92	2547	2378	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04962888	GCA_001658945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/945/GCA_001658945.1_ASM165894v1	-	pK_B01
Bacillus cereus	1396	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.33826	35.3	-	LOMV01	132	5698	5389	3/9/16	3/27/17	Contig	Cornell University	SAMN03800031	GCA_001583765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/765/GCA_001583765.1_ASM158376v1	-	FSL W8-0523
Mycobacterium tuberculosis 3067CJ	1438872	PRJNA233362	233362	Terrabacteria group	Actinobacteria	4.41704	65.6	-	JKBJ01	2	4294	4113	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02567710	GCA_000649315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/315/GCA_000649315.1_Myco_tube_3067CJ_V1	-	3067CJ
Campylobacter jejuni subsp. jejuni	32022	PRJNA266757	266757	Proteobacteria	delta/epsilon subdivisions	1.83101	30.37	chromosome:NZ_CP010301.1/CP010301.1; plasmid pTet:NZ_CP010302.1/CP010302.1; plasmid pVir:NZ_CP010303.1/CP010303.1	-	3	1977	1876	2/10/15	3/16/17	Complete Genome	Public Health Agency of Canada	SAMN03216759	GCA_000835365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/835/365/GCA_000835365.1_ASM83536v1	-	00-0949
Streptococcus pneumoniae TIGR4	170187	PRJNA76613	76613	Terrabacteria group	Firmicutes	2.16224	39.7	-	AKBW01	1	2345	2096	6/15/12	3/9/17	Contig	Broad Institute	SAMN00103527	GCA_000269665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/665/GCA_000269665.1_PB_Stre_pneu_Tigr4_V1	22829535	TIGR4
Helicobacter pylori Hp P-8	992077	PRJNA64181	64181	Proteobacteria	delta/epsilon subdivisions	1.61563	39.2	-	AKPM01	7	1599	1436	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778889	GCA_000274245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/245/GCA_000274245.1_ASM27424v1	23661595	Hp P-8
Neisseria meningitidis 2000063	1145140	PRJNA83493	83493	Proteobacteria	Betaproteobacteria	2.19809	51.9	-	APTA01	140	2576	2196	5/1/13	3/21/17	Contig	IGS	SAMN01780090	GCA_000386465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/465/GCA_000386465.2_ASM38646v2	-	2000063
Streptococcus pyogenes ABC020005773	1438990	PRJNA233105	233105	Terrabacteria group	Firmicutes	1.87354	38.5	-	JJKF01	36	1945	1822	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567454	GCA_000628345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/345/GCA_000628345.1_Stre_pyog_ABC020005773_V1	-	ABC020005773
Leptospira interrogans serovar Copenhageni str. Fiocruz R83	996860	PRJNA63819	63819	Spirochaetes	Spirochaetia	4.55172	35	-	AFLM01	273	4063	3738	6/7/11	5/18/17	Scaffold	J. Craig Venter Institute	SAMN00254365	GCA_000216495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/495/GCA_000216495.2_CLC_glsol162	-	Fiocruz R83
Pseudomonas aeruginosa MSH10	1402487	PRJNA219848	219848	Proteobacteria	Gammaproteobacteria	6.50401	66.3	-	AXRP01	4	6147	5994	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360659	GCA_000481965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/965/GCA_000481965.1_Pseu_aeru_MSH10_V1	-	MSH10
Acinetobacter baumannii AB_2008-15-45	1221256	PRJNA172667	172667	Proteobacteria	Gammaproteobacteria	4.10073	39	-	AMHL01	140	4001	3863	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471271	GCA_000301315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/315/GCA_000301315.1_ASM30131v1	-	AB_2008-15-45
Streptococcus agalactiae MRI Z1-035	1154868	PRJNA86395	86395	Terrabacteria group	Firmicutes	2.13538	35.3	-	ANEP01	43	2214	2103	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993340	GCA_000310705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/705/GCA_000310705.1_ASM31070v1	-	MRI Z1-035
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03763	41.2	-	CEIF01	59	2021	1920	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233973	GCA_000943035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/035/GCA_000943035.1_Velvet_assembly	-	S10C
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.26565	58.5	-	MTZB01	322	6082	5508	4/27/17	5/3/17	Scaffold	Massey University	SAMN06197085	GCA_002111995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/995/GCA_002111995.1_ASM211199v1	28369338	NZ40
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.53975	38.3	-	FJJX01	60	3235	3090	2/20/16	3/27/17	Contig	SC	SAMEA2077753	GCA_900053435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/435/GCA_900053435.1_10625_2_95	-	2532STDY5467568
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.60632	50.9	-	FUED01	350	5162	4409	1/28/17	2/26/17	Contig	SC	SAMEA1569692	GCA_900160625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/625/GCA_900160625.1_8403_8_95	-	sh1479
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.03836	67	-	MUWW01	203	7742	7239	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05002012	GCA_001994475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/475/GCA_001994475.1_ASM199447v1	-	VC10425
Burkholderia pseudomallei MSHR5596	1434926	PRJNA230983	230983	Proteobacteria	Betaproteobacteria	7.55227	67.7	-	JQDE01	208	7889	7175	11/7/14	3/25/17	Contig	Los Alamos National Laboratory	SAMN02997363	GCA_000773335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/335/GCA_000773335.1_BCW_29	25676747	MSHR5596
Vibrio cholerae O1 str. 2010EL-2010H	1124486	PRJNA73589	73589	Proteobacteria	Gammaproteobacteria	4.01827	47.5	-	AHGE01	75	3816	3672	12/12/11	3/22/17	Contig	Public Health Agency of Canada	SAMN00765535	GCA_000237545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/545/GCA_000237545.2_ASM23754v2	22099115	2010EL-2010H
Clostridioides difficile P20	1151405	PRJNA85985	85985	Terrabacteria group	Firmicutes	4.17665	28.7	-	AVLX01	63	3906	3749	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766695	GCA_000451725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/725/GCA_000451725.2_ASM45172v2	-	P20
Vibrio parahaemolyticus S053	1394598	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.00532	45.4	-	AWLK01	790	4938	4455	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338912	GCA_000491155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/155/GCA_000491155.1_S053	-	S053
Klebsiella pneumoniae BIDMC 42b	1400161	PRJNA219248	219248	Proteobacteria	Gammaproteobacteria	5.36996	57.3	-	JCMU01	8	5428	5198	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02356580	GCA_000567185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/185/GCA_000567185.1_Kleb_pneu_BIDMC_42b_V1	-	BIDMC 42b
Enterococcus faecalis EnGen0252	1158630	PRJNA88887	88887	Terrabacteria group	Firmicutes	3.22673	37.3	-	AJBI01	20	3356	3182	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809136	GCA_000394315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/315/GCA_000394315.1_Ente_faec_SF1592_V1	-	SF1592
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.14737	52.4	-	CHZL01	80	2517	2189	4/21/15	4/11/17	Contig	SC	SAMEA1677437	GCA_001319165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/165/GCA_001319165.1_8727_5_79	-	GCGS229
Enterococcus faecium EnGen0173	1157468	PRJNA88365	88365	Terrabacteria group	Firmicutes	2.83083	37.8	-	AIUY01	17	2874	2666	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809000	GCA_000395745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/745/GCA_000395745.1_Ente_faec_VAN_332_V1	-	VAN 332
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15198	41.2	-	CWAZ01	80	2102	1923	6/24/15	3/26/17	Contig	SC	SAMEA1033015	GCA_001179105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/105/GCA_001179105.1_6903_4_55	-	EQUI0105
Campylobacter jejuni subsp. jejuni	32022	PRJNA266761	266761	Proteobacteria	delta/epsilon subdivisions	1.82784	30.3698	chromosome:NZ_CP010072.1/CP010072.1; plasmid pCj1:NZ_CP010073.1/CP010073.1; plasmid pCj2:NZ_CP010074.1/CP010074.1	-	3	1975	1878	2/10/15	3/16/17	Complete Genome	Public Health Agency of Canada	SAMN03216762	GCA_000835345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/835/345/GCA_000835345.1_ASM83534v1	-	01-1512
Lactobacillus plantarum 2025	1385856	PRJNA215163	215163	Terrabacteria group	Firmicutes	3.33426	44.4	-	AVFJ02	164	3206	2820	9/13/13	3/22/16	Contig	Kingston Uniiversity	SAMN02298727	GCA_000466905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/905/GCA_000466905.2_ASM46690v2	26744375	2025
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.10426	59.9	-	FCGB01	15	4886	4724	1/21/16	3/27/17	Scaffold	SC	SAMEA2273909	GCA_001538625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/625/GCA_001538625.1_12082_2_44	-	2880STDY5682836
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68764	31.3	-	FBHE01	32	1762	1666	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683252	GCA_001487225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/225/GCA_001487225.1_CCN153	-	n/a
Enterobacter cloacae	550	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.33671	54.8	-	NGRK01	11	5311	4990	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521882	GCA_002152945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/945/GCA_002152945.1_ASM215294v1	-	MGH131
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.2682	64.1	-	FSAU01	20	5337	5163	12/14/16	3/21/17	Contig	SC	SAMEA2070654	GCA_900131675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/675/GCA_900131675.1_10665_4_26	-	281
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.94516	67.2	-	LPIV01	99	7265	6908	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449573	GCA_001532585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/585/GCA_001532585.1_ASM153258v1	-	MSMB2186WGS
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.05305	54.8	-	LRCK01	195	5107	4694	1/19/16	3/27/17	Contig	JCVI	SAMN04407779	GCA_001518545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/545/GCA_001518545.1_ASM151854v1	-	GN03738
Pseudomonas sp. TTU2014-096BSC	1729725	PRJNA296464	296464	Proteobacteria	Gammaproteobacteria	4.2247	63.2	-	LKKL01	47	3969	3803	11/19/15	4/11/17	Contig	Texas Tech University	SAMN04099673	GCA_001446945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/945/GCA_001446945.1_ASM144694v1	26824353	TTU2014-096BSC
Streptomyces sp. NRRL F-6628	1463876	PRJNA238534	238534	Terrabacteria group	Actinobacteria	6.71474	73.2	-	JOHX01	130	5987	5742	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645492	GCA_000721455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/455/GCA_000721455.1_ASM72145v1	-	NRRL F-6628
Acinetobacter sp. UBA3461	1945939	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.08926	42.5	-	DFRO01	49	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452986	GCA_002381195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/381/195/GCA_002381195.1_ASM238119v1	28894102	-
Bacillus sp. yr331	1761770	PRJEB16006	348201	Terrabacteria group	Firmicutes	5.5176	35	-	FNFG01	77	5909	5559	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487922	GCA_900100415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/415/GCA_900100415.1_IMG-taxon_2615840594_annotated_assembly	-	YR331
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.99673	45.6	-	FMDP01	85	3716	3648	8/16/16	8/16/16	Scaffold	SC	SAMEA3545239	GCA_900066135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/135/GCA_900066135.1_13414_6_15	-	-
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.75264	47	-	FMEM01	14	2654	2604	8/16/16	8/16/16	Scaffold	SC	SAMEA3545249	GCA_900066155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/155/GCA_900066155.1_13414_6_25	-	-
Bacillus sp. cl96	1761762	PRJEB15938	348248	Terrabacteria group	Firmicutes	5.60088	35.1	-	FNDM01	49	6002	5660	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488578	GCA_900100505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/505/GCA_900100505.1_IMG-taxon_2639762528_annotated_assembly	-	CL96
Acinetobacter sp. UBA4567	1945940	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.85346	41.4	-	DGKP01	132	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455504	GCA_002387045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/045/GCA_002387045.1_ASM238704v1	28894102	-
Streptomyces sp. NRRL F-5123	1463856	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.80476	73.2	-	JOHY01	250	7570	7156	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645493	GCA_000721495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/495/GCA_000721495.1_ASM72149v1	-	NRRL F-5123
Pseudomonas sp. TTU2014-105ASC	1729726	PRJNA296464	296464	Proteobacteria	Gammaproteobacteria	4.52084	61.7	-	LKKM01	30	4209	4063	11/19/15	4/11/17	Contig	Texas Tech University	SAMN04099674	GCA_001446975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/975/GCA_001446975.1_ASM144697v1	26824353	TTU2014-105ASC
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.9891	55.5	-	LRCN01	206	5026	4587	1/19/16	3/27/17	Contig	JCVI	SAMN04407784	GCA_001518595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/595/GCA_001518595.1_ASM151859v1	-	GN03866
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.95338	67.2	-	LPIW01	91	7278	6928	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449574	GCA_001532605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/605/GCA_001532605.1_ASM153260v1	-	MSMB2166WGS
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21345	64.1	-	FVDG01	4	5326	5152	3/10/17	3/18/17	Contig	SC	SAMEA2068796	GCA_900131685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/685/GCA_900131685.1_10665_4_27	-	282
Enterobacter cloacae	550	PRJNA322832	322832	Proteobacteria	Gammaproteobacteria	4.93699	54.7	-	LYUR01	53	4844	4619	6/2/17	6/5/17	Scaffold	zhejiang University 	SAMN05173299	GCA_002165535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/535/GCA_002165535.1_ASM216553v1	28243445	ECC3018
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.70166	31.3	-	FBLL01	31	1775	1685	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683363	GCA_001487265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/265/GCA_001487265.1_p604B	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.27346	60	-	FCIX01	26	5002	4838	1/21/16	3/27/17	Scaffold	SC	SAMEA2273980	GCA_001538645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/645/GCA_001538645.1_12082_3_15	-	2880STDY5682907
Lactobacillus plantarum WHE 92	1390373	PRJNA215997	215997	Terrabacteria group	Firmicutes	2.92819	44.8	-	AWOY01	186	2848	1964	3/28/14	6/26/14	Contig	Technical University of Denmark	SAMN02712082	GCA_000604145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/145/GCA_000604145.1_LbplWHE92v1.0	24920558	WHE 92
Campylobacter jejuni	197	PRJNA369621	369621	Proteobacteria	delta/epsilon subdivisions	1.82049	30.3697	chromosome:NZ_CP020776.1/CP020776.1; plasmid pCJP002:NZ_CP020775.1/CP020775.1	-	2	1951	1831	4/20/17	4/22/17	Complete Genome	USDA	SAMN06290126	GCA_002101355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/101/355/GCA_002101355.1_ASM210135v1	-	YH002
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12679	41.2	-	CVZJ01	72	2059	1875	6/23/15	3/26/17	Contig	SC	SAMEA1033016	GCA_001179125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/125/GCA_001179125.1_6903_2_16	-	EQUI0065
Enterococcus faecium EnGen0174	1157469	PRJNA88367	88367	Terrabacteria group	Firmicutes	2.80899	38	-	AIUZ01	15	2857	2624	5/3/13	4/10/17	Scaffold	Broad Institute	SAMN00809002	GCA_000395765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/765/GCA_000395765.1_Ente_faec_VAN_335_V1	-	VAN 335
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.14392	52.4	-	CFSK01	75	2518	2210	3/15/15	4/11/17	Contig	SC	SAMEA1677444	GCA_001319185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/185/GCA_001319185.1_8727_5_88	-	GCGS238
Enterococcus faecalis EnGen0251	1158631	PRJNA88889	88889	Terrabacteria group	Firmicutes	3.28353	37.1	-	AJBJ01	30	3417	3210	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809137	GCA_000394335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/335/GCA_000394335.1_Ente_faec_WH571_V1	-	WH571
Klebsiella pneumoniae BIDMC 42a	1400160	PRJNA219247	219247	Proteobacteria	Gammaproteobacteria	5.38778	57.3	-	JCMV01	7	5446	5207	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02356579	GCA_000567205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/205/GCA_000567205.1_Kleb_pneu_BIDMC_42a_V1	-	BIDMC 42a
Vibrio parahaemolyticus S052	1394597	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	4.99532	45.3	-	AWLL01	591	4869	4550	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338911	GCA_000491175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/175/GCA_000491175.1_S052	-	S052
Clostridioides difficile P29	1151411	PRJNA85997	85997	Terrabacteria group	Firmicutes	4.15604	28.8	-	AVMD01	63	3893	3701	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766699	GCA_000451745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/745/GCA_000451745.2_ASM45174v2	-	P29
Vibrio cholerae O1 str. 2010EL-2010N	1124484	PRJNA73589	73589	Proteobacteria	Gammaproteobacteria	4.01965	47.5	-	AHGF01	77	3810	3658	12/12/11	3/22/17	Contig	Public Health Agency of Canada	SAMN00765536	GCA_000237565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/565/GCA_000237565.2_ASM23756v2	22099115	2010EL-2010N
Burkholderia pseudomallei MSHR7498	1435048	PRJNA231068	231068	Proteobacteria	Betaproteobacteria	7.13789	68.2	-	JQDH01	167	7440	6785	11/7/14	3/25/17	Contig	Los Alamos National Laboratory	SAMN02997401	GCA_000773355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/355/GCA_000773355.1_BCW_37	25676747	MSHR7498
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.25217	67	-	MUWU01	190	7929	7411	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05002010	GCA_001994495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/495/GCA_001994495.1_ASM199449v1	-	VC10023
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.57822	50.8	-	FUEE01	358	5070	4348	1/28/17	3/2/17	Contig	SC	SAMEA1569673	GCA_900160635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/635/GCA_900160635.1_8403_8_96	-	sh1480
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54151	38.3	-	FJJZ01	60	3237	3091	2/20/16	3/27/17	Contig	SC	SAMEA2080695	GCA_900053445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/445/GCA_900053445.1_10625_3_26	-	2532STDY5467595
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.28817	58.5	-	MTZG01	325	6115	5521	4/27/17	5/3/17	Scaffold	Massey University	SAMN06197090	GCA_002112085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/085/GCA_002112085.1_ASM211208v1	28369338	NZ46
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.29001	41.5	-	CEHB01	335	2212	2053	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234083	GCA_000943055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/055/GCA_000943055.1_Velvet_assembly	-	type strain: S93
Streptococcus agalactiae FSL S3-090	1154796	PRJNA86183	86183	Terrabacteria group	Firmicutes	2.09715	35.3	-	ANCQ01	27	2173	2049	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991080	GCA_000310725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/725/GCA_000310725.1_ASM31072v1	-	FSL S3-090
Acinetobacter baumannii AB_2008-15-69	1221258	PRJNA172669	172669	Proteobacteria	Gammaproteobacteria	4.13691	39.1	-	AMHN01	75	3999	3860	10/2/12	5/18/17	Contig	Translational Genomics Research Institute	SAMN02471249	GCA_000301335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/335/GCA_000301335.1_ASM30133v1	-	AB_2008-15-69
Pseudomonas aeruginosa MSH3	1402486	PRJNA219847	219847	Proteobacteria	Gammaproteobacteria	6.50709	66.3	-	AXRQ01	7	6160	6009	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360658	GCA_000481985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/481/985/GCA_000481985.1_Pseu_aeru_MSH3_V1	-	MSH3
Leptospira interrogans serovar Copenhageni str. Fiocruz LV3879	996859	PRJNA63817	63817	Spirochaetes	Spirochaetia	4.55223	35	-	AFLL01	263	4054	3737	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254363	GCA_000216515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/515/GCA_000216515.2_CLC_glsol158	-	Fiocruz LV3879
Streptococcus pyogenes ABC020006345	1438996	PRJNA233109	233109	Terrabacteria group	Firmicutes	1.82989	38.5	-	JJKG01	2	1878	1756	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567458	GCA_000628365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/365/GCA_000628365.1_Stre_pyog_ABC020006345_V1	-	ABC020006345
Neisseria meningitidis 2002007	1145141	PRJNA83495	83495	Proteobacteria	Betaproteobacteria	2.19411	51.9	-	APTB01	147	2543	2150	5/1/13	3/21/17	Contig	IGS	SAMN01780091	GCA_000386485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/485/GCA_000386485.2_ASM38648v2	-	2002007
Helicobacter pylori Hp H-34	992069	PRJNA64165	64165	Proteobacteria	delta/epsilon subdivisions	1.62724	39.2	-	AKPH01	8	1608	1456	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778906	GCA_000274265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/265/GCA_000274265.1_ASM27426v1	23661595	Hp H-34
Streptococcus pneumoniae 2070005	914139	PRJNA59921	59921	Terrabacteria group	Firmicutes	2.03913	39.6	-	ALAX01	33	2256	2013	7/16/12	3/8/17	Contig	"Academic Medical Center Amsterdam, The Netherlands"	SAMN02471544	GCA_000278765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/765/GCA_000278765.1_ASM27876v1	-	2070005
Tenacibaculum jejuense	584609	PRJEB21331	398769	FCB group	Bacteroidetes/Chlorobi group	4.61488	30.3	chromosome TJEJU:NZ_LT899436.1/LT899436.1	-	1	4040	3938	8/15/17	8/28/17	Complete Genome	INRA	SAMEA104150437	GCA_900198195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/198/195/GCA_900198195.1_Tjejuense_V1	-	type strain: KCTC 22618
Mycobacterium tuberculosis 2100HD	1438852	PRJNA233364	233364	Terrabacteria group	Actinobacteria	4.53485	65.7	-	JKBH01	113	4493	4256	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02567712	GCA_000649335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/335/GCA_000649335.1_Myco_tube_2100HD_V1	-	2100HD
Bacillus cereus	1396	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.7909	35.1	-	LOMT01	182	6160	5873	3/9/16	3/27/17	Contig	Cornell University	SAMN03800028	GCA_001583805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/805/GCA_001583805.1_ASM158380v1	-	FSL W8-0275
Staphylococcus epidermidis	1282	PRJNA319642	319642	Terrabacteria group	Firmicutes	2.52615	32	-	LYSB01	93	2508	2358	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04962890	GCA_001658985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/985/GCA_001658985.1_ASM165898v1	-	Kt1p58
Listeria monocytogenes F6900	393128	PRJNA17321	17321	Terrabacteria group	Firmicutes	2.96862	37.8	-	AARU02	23	3023	2951	10/16/06	2/26/17	Contig	Broad Institute	SAMN00771317	GCA_000168615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/615/GCA_000168615.1_ASM16861v1	-	F6900
Yersinia pestis CMCC125002	755913	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.51801	47.6	-	ADQN01	790	4247	4022	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403036	GCA_000324025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/025/GCA_000324025.1_ASM32402v1	23271803	CMCC125002
Campylobacter jejuni subsp. jejuni 1928	889235	PRJNA52895	52895	Proteobacteria	delta/epsilon subdivisions	1.6374	30.5	-	AIPL01	127	1741	1645	3/16/12	3/15/17	Contig	Cornell University	SAMN02428999	GCA_000255035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/035/GCA_000255035.2_ASM25503v2	23279811	1928
Campylobacter pinnipediorum subsp. pinnipediorum	1660067	PRJNA284984	284984	Proteobacteria	delta/epsilon subdivisions	1.63522	30.3	chromosome:NZ_CP012548.1/CP012548.1	-	1	1609	1523	3/6/17	3/8/17	Complete Genome	"USDA, ARS, WRRC"	SAMN03737984	GCA_002021965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/965/GCA_002021965.1_ASM202196v1	-	RM17262
Staphylococcus aureus M0035	1157006	PRJNA88569	88569	Terrabacteria group	Firmicutes	2.89303	32.9	-	AIVS01	4	3029	2855	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792130	GCA_000360005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/005/GCA_000360005.1_Stap_aure_M0035_V1	-	M0035
Staphylococcus aureus M0045	1157007	PRJNA88571	88571	Terrabacteria group	Firmicutes	2.95442	33	-	AIVT01	7	3115	2939	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792131	GCA_000360025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/025/GCA_000360025.1_Stap_aure_M0045_V1	-	M0045
Campylobacter jejuni subsp. jejuni	32022	PRJNA276739	276739	Proteobacteria	delta/epsilon subdivisions	1.78531	30.3	chromosome:NZ_CP017033.1/CP017033.1	-	1	1882	1734	9/8/16	3/20/17	Complete Genome	University of Michigan	SAMN03380193	GCA_001721985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/985/GCA_001721985.1_ASM172198v1	-	MTVDSCj16
Campylobacter jejuni subsp. jejuni LMG 9872	889236	PRJNA52897	52897	Proteobacteria	delta/epsilon subdivisions	1.6204	30.4	-	AIPM01	91	1691	1565	3/16/12	3/15/17	Contig	Cornell University	SAMN02429000	GCA_000255055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/055/GCA_000255055.2_ASM25505v2	-	LMG 9872
Yersinia pestis CMCC18019	755917	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.49599	47.6	-	ADQO01	1478	4406	3852	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403037	GCA_000324045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/045/GCA_000324045.1_ASM32404v1	23271803	CMCC18019
Listeria monocytogenes J2818	393131	PRJNA17327	17327	Terrabacteria group	Firmicutes	2.97304	37.8	-	AARX02	24	3037	2965	10/16/06	2/26/17	Contig	Broad Institute	SAMN00769972	GCA_000168655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/655/GCA_000168655.1_ASM16865v1	-	J2818
Staphylococcus epidermidis	1282	PRJNA319642	319642	Terrabacteria group	Firmicutes	2.73081	31.8	-	LYSF01	89	2784	2616	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04962894	GCA_001658995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/995/GCA_001658995.1_ASM165899v1	-	B2461
Bacillus cereus	1396	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.68812	35	-	LOQD01	1097	6062	5610	3/9/16	3/27/17	Contig	Cornell University	SAMN03800035	GCA_001583845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/845/GCA_001583845.1_ASM158384v1	-	FSL W8-0767
Mycobacterium tuberculosis 2099HD	1438851	PRJNA233365	233365	Terrabacteria group	Actinobacteria	4.62158	65.7	-	JKBG01	182	4607	4303	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02567713	GCA_000649355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/355/GCA_000649355.1_Myco_tube_2099HD_V1	-	2099HD
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.64279	30.3	chromosome:NZ_CP010471.1/CP010471.1	-	1	1714	1579	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246034	GCA_001506185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/185/GCA_001506185.1_ASM150618v1	-	CJ677CC519
Streptococcus pneumoniae 2070035	914131	PRJNA59905	59905	Terrabacteria group	Firmicutes	2.05057	39.6	-	ALAY01	24	2256	2017	7/16/12	3/8/17	Contig	"Academic Medical Center Amsterdam, The Netherlands"	SAMN02471539	GCA_000278785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/785/GCA_000278785.1_ASM27878v1	-	2070035
Helicobacter pylori Hp P-15	992080	PRJNA64187	64187	Proteobacteria	delta/epsilon subdivisions	1.65282	38.9	-	AKPP01	4	1636	1481	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778875	GCA_000274285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/285/GCA_000274285.1_ASM27428v1	23661595	Hp P-15
Neisseria meningitidis NM604	1145142	PRJNA83497	83497	Proteobacteria	Betaproteobacteria	2.2098	52	-	APTC01	139	2577	2172	5/1/13	3/21/17	Contig	IGS	SAMN01780092	GCA_000386505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/505/GCA_000386505.2_ASM38650v2	-	NM604
Streptococcus pyogenes ABC020006715	1438997	PRJNA233110	233110	Terrabacteria group	Firmicutes	1.83084	38.5	-	JJKH01	2	1874	1751	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567459	GCA_000628385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/385/GCA_000628385.1_Stre_pyog_ABC020006715_V1	-	ABC020006715
Leptospira interrogans serovar Copenhageni str. Fiocruz LV3834	996858	PRJNA63815	63815	Spirochaetes	Spirochaetia	4.54473	35	-	AFLK01	380	4069	3730	6/7/11	5/18/17	Scaffold	J. Craig Venter Institute	SAMN00254362	GCA_000216535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/535/GCA_000216535.2_CLC_glsol157	-	Fiocruz LV3834
Pseudomonas aeruginosa E2	1163395	PRJNA219846	219846	Proteobacteria	Gammaproteobacteria	6.4108	66.3	-	AXRR01	10	6008	5847	10/24/13	3/15/17	Scaffold	Broad Institute	SAMN02360657	GCA_000482005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/005/GCA_000482005.1_Pseu_aeru_E2_V1	-	E2
Acinetobacter baumannii AB_2008-15-71	1221260	PRJNA172671	172671	Proteobacteria	Gammaproteobacteria	3.8861	38.9	-	AMHP01	90	3698	3561	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471278	GCA_000301355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/355/GCA_000301355.1_ASM30135v1	-	AB_2008-15-71
Streptococcus agalactiae FSL S3-014	1154797	PRJNA86185	86185	Terrabacteria group	Firmicutes	2.16318	35.1	-	ANCR01	25	2229	2106	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991078	GCA_000310745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/745/GCA_000310745.1_ASM31074v1	-	FSL S3-014
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.27286	40.8	-	CEDE01	130	2310	2132	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233887	GCA_000943075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/075/GCA_000943075.1_Velvet_assembly	-	LS0M
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.26676	58.5	-	MTZA01	315	6097	5510	4/27/17	5/3/17	Scaffold	Massey University	SAMN06197084	GCA_002113905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/905/GCA_002113905.1_ASM211390v1	28369338	NZ39
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.51622	38.2	-	FJAI01	36	3221	3074	2/20/16	3/27/17	Contig	SC	SAMEA2058275	GCA_900053665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/665/GCA_900053665.1_10771_1_7	-	2531STDY5467288
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.57793	50.8	-	FUFY01	339	5062	4367	2/7/17	2/26/17	Contig	SC	SAMEA1569686	GCA_900162755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/755/GCA_900162755.1_8403_8_80	-	sh1464
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.18002	67.1	-	MUWV01	196	7875	7371	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05002011	GCA_001994505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/505/GCA_001994505.1_ASM199450v1	-	VC10414
Burkholderia pseudomallei MSHR7334	1434930	PRJNA230988	230988	Proteobacteria	Betaproteobacteria	7.18438	68.1	-	JQDF01	174	7499	6846	11/7/14	3/25/17	Contig	Los Alamos National Laboratory	SAMN02997388	GCA_000773365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/365/GCA_000773365.1_BCW_32	25676747	MSHR7334
Vibrio cholerae O1 str. 2010V-1014	1124476	PRJNA73589	73589	Proteobacteria	Gammaproteobacteria	4.0159	47.5	-	AHGG01	75	3806	3666	12/12/11	3/22/17	Contig	Public Health Agency of Canada	SAMN00765517	GCA_000237585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/585/GCA_000237585.2_ASM23758v2	22099115	2010V-1014
Clostridioides difficile P30	1151412	PRJNA85999	85999	Terrabacteria group	Firmicutes	4.18143	28.6	-	AVME01	54	3903	3697	8/20/13	3/15/17	Contig	Institute for Genome Sciences	SAMN01766701	GCA_000451765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/765/GCA_000451765.1_ASM45176v1	-	P30
Vibrio parahaemolyticus S049	1394596	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.22948	45	-	AWLM01	714	5053	4773	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338910	GCA_000491195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/195/GCA_000491195.1_S049	-	S049
Klebsiella pneumoniae BIDMC 34	1328423	PRJNA202046	202046	Proteobacteria	Gammaproteobacteria	5.71639	57.1	-	JCMX01	5	5844	5568	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138665	GCA_000567245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/245/GCA_000567245.1_Kleb_pneu_BIDMC_34_V1	-	BIDMC 34
Enterococcus faecalis EnGen0231	1158632	PRJNA88891	88891	Terrabacteria group	Firmicutes	3.28118	37.1	-	AJBK01	44	3464	3283	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809138	GCA_000394355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/355/GCA_000394355.1_Ente_faec_B5035_V1	-	B5035
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.15265	52.4	-	CHJZ01	89	2530	2204	4/21/15	4/11/17	Contig	SC	SAMEA1677483	GCA_001319205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/205/GCA_001319205.1_8727_5_82	-	GCGS232
Enterococcus faecium EnGen0175	1157470	PRJNA88369	88369	Terrabacteria group	Firmicutes	2.84074	37.9	-	AIVA01	41	2919	2699	5/3/13	3/24/17	Scaffold	Broad Institute	SAMN00809003	GCA_000395785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/785/GCA_000395785.1_Ente_faec_VAN_342_V1	-	VAN 342
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12675	41.2	-	CWFT01	77	2046	1874	6/23/15	3/26/17	Contig	SC	SAMEA1033019	GCA_001179145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/145/GCA_001179145.1_6817_1_67	-	EQUI0020
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.66977	30.3	chromosome:NZ_CP010472.1/CP010472.1	-	1	1773	1631	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246003	GCA_001506205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/205/GCA_001506205.1_ASM150620v1	-	CJ677CC002
Lactobacillus plantarum 19L3	1399793	PRJNA218842	218842	Terrabacteria group	Firmicutes	3.28927	44.4	-	AWTS01	241	-	-	3/28/14	4/29/14	Contig	Fundacion para el Fomento de la Investigacion Sanitaria y Biomedica de la Comunidad Valenciana (FISABIO-Salud Publica)	SAMN02353165	GCA_000604365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/365/GCA_000604365.1_LactobacillusPlantarum	24762933	19L3
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.10893	60.1	-	FCMQ01	30	4808	4650	1/21/16	3/27/17	Scaffold	SC	SAMEA2274047	GCA_001538665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/665/GCA_001538665.1_12082_5_47	-	2880STDY5682975
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65976	31.4	-	FBJM01	25	1715	1626	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683311	GCA_001487285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/285/GCA_001487285.1_EC3298	-	n/a
Enterobacter cloacae	550	PRJNA393769	393769	Proteobacteria	Gammaproteobacteria	4.5999	56.1	-	NPNT01	36	4403	4216	8/22/17	8/24/17	Scaffold	National University of Singapore and Genome Institute of Singapore	SAMN07448199	GCA_002266365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/365/GCA_002266365.1_ASM226636v1	-	DS23372
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21074	64.1	-	FVDH01	9	5327	5149	3/10/17	3/18/17	Contig	SC	SAMEA2070655	GCA_900131695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/695/GCA_900131695.1_10665_4_29	-	284
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.86674	67.2	-	LPIX01	116	7207	6839	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449575	GCA_001532625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/625/GCA_001532625.1_ASM153262v1	-	MSMB2167WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.8686	55.4	-	LRCT01	165	4871	4490	1/19/16	3/27/17	Contig	JCVI	SAMN04407790	GCA_001518605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/605/GCA_001518605.1_ASM151860v1	-	GN04369
Pseudomonas sp. ICMP 19500	1208102	PRJNA295868	295868	Proteobacteria	Gammaproteobacteria	6.43781	59.9	-	LKBK01	144	6033	5796	12/15/15	4/16/17	Contig	New Zealand Institute for Plant & Food research	SAMN04092561	GCA_001467145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/145/GCA_001467145.1_ASM146714v1	27056212	ICMP 19500
Streptomyces sp. NRRL F-5193	1463860	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.9034	73.3	-	JOHZ01	231	8083	7673	7/2/14	3/12/17	Contig	University of Illinois	SAMN02645494	GCA_000721515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/515/GCA_000721515.1_ASM72151v1	-	NRRL F-5193
Acinetobacter sp. UBA4611	1945942	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.68491	42.3	-	DGIX01	303	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457684	GCA_002387425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/425/GCA_002387425.1_ASM238742v1	28894102	-
Bacillus sp. OK048	1882761	PRJEB16200	348958	Terrabacteria group	Firmicutes	5.17159	38	-	FNHN01	42	5095	4876	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05443253	GCA_900103525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/525/GCA_900103525.1_IMG-taxon_2687453680_annotated_assembly	-	OK048
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.95112	42.4	-	FMEY01	44	2854	2802	8/16/16	8/16/16	Scaffold	SC	SAMEA3545255	GCA_900066195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/195/GCA_900066195.1_13414_6_31	-	-
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.01274	38.2	-	FMER01	61	2733	2682	8/16/16	8/16/16	Scaffold	SC	SAMEA3545261	GCA_900066215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/215/GCA_900066215.1_13414_6_37	-	-
Bacillus sp. 166amftsu	1761753	PRJEB16624	349945	Terrabacteria group	Firmicutes	5.25404	35.3	-	FNQA01	67	5552	5070	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488156	GCA_900107445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/445/GCA_900107445.1_IMG-taxon_2636416173_annotated_assembly	-	166AMFTsu
Acinetobacter sp. UBA4600	1945941	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	2.69856	42.3	-	DGJI01	327	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454883	GCA_002387485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/485/GCA_002387485.1_ASM238748v1	28894102	-
Streptomyces sp. NRRL F-3307	1463849	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.3531	71.8	-	JOIC01	260	9384	8648	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645497	GCA_000721525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/525/GCA_000721525.1_ASM72152v1	-	NRRL F-3307
Pseudomonas sp. ICMP 10191	1198294	PRJNA296731	296731	Proteobacteria	Gammaproteobacteria	6.00309	59.3	-	LKGW01	189	5485	5163	12/15/15	4/16/17	Contig	New Zealand Institute for Plant & Food research	SAMN04102816	GCA_001467335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/335/GCA_001467335.1_ASM146733v1	27056212	ICMP 10191
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.64067	55.5	-	LRCQ01	123	4569	4241	1/19/16	3/27/17	Contig	JCVI	SAMN04407787	GCA_001518625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/625/GCA_001518625.1_ASM151862v1	-	GN04311
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.51234	67.2	-	LPJB01	128	6825	6484	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449579	GCA_001532655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/655/GCA_001532655.1_ASM153265v1	-	MSMB2159WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.04451	64.2	-	FSAV01	34	5038	4897	12/14/16	3/21/17	Contig	SC	SAMEA2071364	GCA_900131705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/705/GCA_900131705.1_10665_4_28	-	283
Enterobacter cloacae	550	PRJNA393769	393769	Proteobacteria	Gammaproteobacteria	4.75664	54.9	-	NPNL01	50	4606	4392	8/22/17	8/24/17	Scaffold	National University of Singapore and Genome Institute of Singapore	SAMN07448207	GCA_002266385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/385/GCA_002266385.1_ASM226638v1	-	DS31253
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.84468	31	-	FBNC01	58	1921	1802	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683438	GCA_001487305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/305/GCA_001487305.1_H043880653	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.0073	60.2	-	FCKS01	17	4722	4572	1/21/16	3/27/17	Scaffold	SC	SAMEA2274039	GCA_001538685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/685/GCA_001538685.1_12082_3_64	-	2880STDY5682967
Lactobacillus plantarum subsp. plantarum ATCC 14917 = JCM 1149 = CGMCC 1.2437	525338	PRJDB641	243219	Terrabacteria group	Firmicutes	3.20946	44.5	-	BALV01	39	-	-	4/1/14	7/24/15	Contig	The University of Tokyo	SAMD00012694	GCA_000615325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/325/GCA_000615325.1_ASM61532v1	-	JCM 1149
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.64228	30.3	chromosome:NZ_CP010474.1/CP010474.1	-	1	1717	1578	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246051	GCA_001506245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/245/GCA_001506245.1_ASM150624v1	-	CJ677CC536
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12911	41.2	-	CWDU01	78	2068	1889	6/24/15	3/26/17	Contig	SC	SAMEA1033020	GCA_001179165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/165/GCA_001179165.1_6903_7_32	-	EQUI0177
Enterococcus faecium EnGen0176	1157471	PRJNA88371	88371	Terrabacteria group	Firmicutes	2.78885	38	-	AIVB01	19	2836	2627	5/3/13	4/10/17	Scaffold	Broad Institute	SAMN00809004	GCA_000395805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/805/GCA_000395805.1_Ente_faec_VAN_345_V1	-	VAN 345
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.13814	52.5	-	CGCV01	68	2492	2184	3/15/15	4/11/17	Contig	SC	SAMEA1690314	GCA_001354635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/635/GCA_001354635.1_8727_8_90	-	GCGS186
Enterococcus faecalis EnGen0249	1158633	PRJNA88893	88893	Terrabacteria group	Firmicutes	3.03057	37.3	-	AJBL01	6	3053	2886	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809139	GCA_000394375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/375/GCA_000394375.1_Ente_faec_Com_2_V1	-	Com 2
Klebsiella pneumoniae BIDMC 32	1328421	PRJNA202043	202043	Proteobacteria	Gammaproteobacteria	5.76752	57.1	-	JCMY01	17	5851	5568	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138662	GCA_000567265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/265/GCA_000567265.1_Kleb_pneu_BIDMC_32_V1	-	BIDMC 32
Vibrio parahaemolyticus S048	1394595	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.22128	45.2	-	AWLN01	557	4944	4725	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338909	GCA_000491215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/215/GCA_000491215.1_S048	-	S048
Clostridioides difficile P31	1151413	PRJNA86001	86001	Terrabacteria group	Firmicutes	4.10266	28.5	-	AVMF01	53	3796	3651	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766702	GCA_000451785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/785/GCA_000451785.2_ASM45178v2	-	P31
Vibrio cholerae O1 str. 2011EL-1089	1124481	PRJNA73589	73589	Proteobacteria	Gammaproteobacteria	4.0137	47.5	-	AHGH01	87	3804	3664	12/12/11	3/22/17	Contig	Public Health Agency of Canada	SAMN00765518	GCA_000237605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/605/GCA_000237605.2_ASM23760v2	22099115	2011EL-1089
Burkholderia pseudomallei MSHR7500	1435374	PRJNA231174	231174	Proteobacteria	Betaproteobacteria	7.14734	68.2	-	JREN01	138	7402	6805	11/7/14	3/25/17	Contig	Los Alamos National Laboratory	SAMN03015202	GCA_000773415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/415/GCA_000773415.1_BCW_38	25676747	MSHR7500
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.75382	67	-	MUPY01	117	7425	7010	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001806	GCA_001994535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/535/GCA_001994535.1_ASM199453v1	-	VC5279
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.48091	50.8	-	FUGA01	359	4914	4260	2/7/17	2/26/17	Contig	SC	SAMEA1569749	GCA_900162775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/775/GCA_900162775.1_8403_8_29	-	sh1413
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.44627	38.3	-	FJBN01	42	3158	3005	2/20/16	3/27/17	Contig	SC	SAMEA2065573	GCA_900053675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/675/GCA_900053675.1_10771_3_3	-	2531STDY5467380
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.27817	58.5	-	MTZK01	323	6103	5503	4/27/17	5/3/17	Scaffold	Massey University	SAMN06197094	GCA_002113925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/925/GCA_002113925.1_ASM211392v1	28369338	NZ54
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.08296	41.1	-	CEKM01	63	2069	1975	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233987	GCA_000943115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/115/GCA_000943115.1_Velvet_assembly	-	S11N
Streptococcus agalactiae CCUG 47293	1105268	PRJNA86259	86259	Terrabacteria group	Firmicutes	2.01286	35.2	-	ANDO01	24	2068	1960	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991098	GCA_000310765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/765/GCA_000310765.1_ASM31076v1	-	CCUG 47293
Acinetobacter baumannii AB_515-8	1221265	PRJNA172676	172676	Proteobacteria	Gammaproteobacteria	4.07748	39	-	AMHU01	222	3971	3812	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471262	GCA_000301375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/375/GCA_000301375.1_ASM30137v1	-	AB_515-8
Pseudomonas aeruginosa 62	1402485	PRJNA219845	219845	Proteobacteria	Gammaproteobacteria	6.54543	66.2	-	AXRS01	5	6199	6052	10/24/13	3/16/17	Scaffold	Broad Institute	SAMN02360656	GCA_000482025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/025/GCA_000482025.1_Pseu_aeru_62_V1	-	62
Leptospira interrogans serovar Copenhageni str. Fiocruz LV3738	996857	PRJNA63813	63813	Spirochaetes	Spirochaetia	4.54632	35	-	AFLJ01	396	4104	3729	6/7/11	3/27/17	Scaffold	J. Craig Venter Institute	SAMN00254364	GCA_000216555.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/555/GCA_000216555.3_CLC_glsol156	-	Fiocruz LV3738
Streptococcus pyogenes ABC020014764	1439011	PRJNA233114	233114	Terrabacteria group	Firmicutes	1.83579	38.5	-	JJKI01	2	1891	1753	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567463	GCA_000628405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/405/GCA_000628405.1_Stre_pyog_ABC020014764_V1	-	ABC020014764
Neisseria meningitidis NM606	1145143	PRJNA83499	83499	Proteobacteria	Betaproteobacteria	2.15701	52	-	APTD01	135	2509	2118	5/1/13	3/21/17	Contig	IGS	SAMN01780093	GCA_000386525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/525/GCA_000386525.2_ASM38652v2	-	NM606
Helicobacter pylori Hp P-16	992081	PRJNA64189	64189	Proteobacteria	delta/epsilon subdivisions	1.54913	39.1	-	AKPQ01	5	1534	1392	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778876	GCA_000274305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/305/GCA_000274305.1_ASM27430v1	23661595	Hp P-16
Streptococcus pneumoniae 2070109	914132	PRJNA59907	59907	Terrabacteria group	Firmicutes	1.99883	39.8	-	ALBA01	31	2188	1933	7/16/12	3/8/17	Contig	"Academic Medical Center Amsterdam, The Netherlands"	SAMN02471540	GCA_000278825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/825/GCA_000278825.1_ASM27882v1	-	2070109
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.67255	30.3	chromosome:NZ_CP010475.1/CP010475.1	-	1	1772	1631	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246026	GCA_001506265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/265/GCA_001506265.1_ASM150626v1	-	CJ677CC073
Mycobacterium tuberculosis 2094HD	1438849	PRJNA233368	233368	Terrabacteria group	Actinobacteria	4.45109	65.6	-	JKBD01	122	4421	4191	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02567716	GCA_000649375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/375/GCA_000649375.1_Myco_tube_2094HD_V1	-	2094HD
Bacillus cereus	1396	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.66364	35.2	-	LOQC01	204	6100	5822	3/9/16	3/27/17	Contig	Cornell University	SAMN03800034	GCA_001583855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/855/GCA_001583855.1_ASM158385v1	-	FSL W8-0932
Staphylococcus epidermidis	1282	PRJNA319642	319642	Terrabacteria group	Firmicutes	2.64011	31.8	-	LYSL01	71	2683	2514	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04963293	GCA_001659025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/025/GCA_001659025.1_ASM165902v1	-	B16261
Listeria monocytogenes HPB2262	401650	PRJNA17597	17597	Terrabacteria group	Firmicutes	2.99112	37.8	-	AATL02	79	3063	2967	11/8/06	2/26/17	Contig	Broad Institute	SAMN02415241	GCA_000168815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/815/GCA_000168815.1_ASM16881v1	-	HPB2262
Yersinia pestis CMCC21106	755918	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.25199	48	-	ADQP01	1387	4122	3709	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403038	GCA_000324065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/065/GCA_000324065.1_ASM32406v1	23271803	CMCC21106
Campylobacter jejuni subsp. jejuni LMG 23210	889237	PRJNA52899	52899	Proteobacteria	delta/epsilon subdivisions	1.7641	30.2	-	AIPN01	164	1852	1714	3/16/12	3/15/17	Contig	Cornell University	SAMN02428966	GCA_000255075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/075/GCA_000255075.2_ASM25507v2	-	LMG 23210
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.66843	30.3	chromosome:NZ_CP010476.1/CP010476.1	-	1	1785	1629	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246036	GCA_001506285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/285/GCA_001506285.1_ASM150628v1	-	CJ677CC521
Staphylococcus aureus M0055	1158508	PRJNA88923	88923	Terrabacteria group	Firmicutes	2.96038	33	-	AJBZ01	5	3089	2924	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809158	GCA_000360045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/045/GCA_000360045.1_Stap_aure_M0055_V1	-	M0055
Staphylococcus aureus M0060	1157008	PRJNA88925	88925	Terrabacteria group	Firmicutes	2.92267	33	-	AJCA01	12	3062	2891	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809159	GCA_000360065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/065/GCA_000360065.1_Stap_aure_M0060_V1	-	M0060
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.6676	30.3	chromosome:NZ_CP010477.1/CP010477.1	-	1	1757	1619	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246041	GCA_001506305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/305/GCA_001506305.1_ASM150630v1	-	CJ677CC526
Campylobacter jejuni subsp. jejuni LMG 23211	889238	PRJNA52901	52901	Proteobacteria	delta/epsilon subdivisions	1.67236	30.4	-	AIPO01	112	1753	1631	3/16/12	3/15/17	Contig	Cornell University	SAMN02429052	GCA_000255095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/095/GCA_000255095.2_ASM25509v2	23279811	LMG 23211
Yersinia pestis CMCC27002	755919	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.2826	48.1	-	ADQQ01	1451	4111	3719	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403039	GCA_000324085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/085/GCA_000324085.1_ASM32408v1	23271803	CMCC27002
Listeria monocytogenes serotype 1/2a str. NCCP No. 15743	1293288	PRJNA188655	188655	Terrabacteria group	Firmicutes	2.86066	38.1	-	APJT01	5	2918	2756	5/16/13	2/26/17	Contig	Korea National Institute of Health	SAMN02415250	GCA_000397145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/145/GCA_000397145.1_Listeria_monocytogenes_1.0	-	NCCP No. 15743
Staphylococcus epidermidis	1282	PRJNA319642	319642	Terrabacteria group	Firmicutes	2.63899	31.8	-	LYSC01	65	2681	2515	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04962891	GCA_001659045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/045/GCA_001659045.1_ASM165904v1	-	B647
Bacillus cereus	1396	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.88222	35.1	-	LOQB01	169	6336	6037	3/9/16	3/27/17	Contig	Cornell University	SAMN03800033	GCA_001583865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/865/GCA_001583865.1_ASM158386v1	-	FSL W8-0824
Mycobacterium tuberculosis 2093HD	1438848	PRJNA233371	233371	Terrabacteria group	Actinobacteria	4.38258	65.6	-	JKBB01	85	4327	4123	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02567719	GCA_000649395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/395/GCA_000649395.1_Myco_tube_2093HD_V1	-	2093HD
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.66518	30.3	chromosome:NZ_CP010479.1/CP010479.1	-	1	1749	1611	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246015	GCA_001506345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/345/GCA_001506345.1_ASM150634v1	-	CJ677CC036
Streptococcus pneumoniae 2070425	914133	PRJNA59909	59909	Terrabacteria group	Firmicutes	2.14776	39.6	-	ALBC01	60	2419	2162	7/16/12	3/8/17	Contig	"Academic Medical Center Amsterdam, The Netherlands"	SAMN02471537	GCA_000278865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/865/GCA_000278865.1_ASM27886v1	-	2070425
Helicobacter pylori Hp P-23	992083	PRJNA64193	64193	Proteobacteria	delta/epsilon subdivisions	1.64352	38.8	-	AKPR01	3	1647	1470	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778896	GCA_000274325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/325/GCA_000274325.1_ASM27432v1	23661595	Hp P-23
Neisseria meningitidis NM607	1145144	PRJNA83501	83501	Proteobacteria	Betaproteobacteria	2.17928	52	-	APTE01	148	2512	2163	5/1/13	3/21/17	Contig	IGS	SAMN01780094	GCA_000386545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/545/GCA_000386545.2_ASM38654v2	-	NM607
Streptococcus pyogenes ABC020030020	1439059	PRJNA233135	233135	Terrabacteria group	Firmicutes	1.82983	38.5	-	JJKJ01	2	1878	1753	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567484	GCA_000628425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/425/GCA_000628425.1_Stre_pyog_ABC020030020_V1	-	ABC020030020
Leptospira interrogans serovar Copenhageni str. Fiocruz LV3737	996856	PRJNA63811	63811	Spirochaetes	Spirochaetia	4.54904	35	-	AFLI01	365	4079	3734	6/7/11	5/18/17	Scaffold	J. Craig Venter Institute	SAMN00254361	GCA_000216575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/575/GCA_000216575.2_CLC_glsol155	-	Fiocruz LV3737
Pseudomonas aeruginosa PS50	1402582	PRJNA219944	219944	Proteobacteria	Gammaproteobacteria	6.90445	65.9	-	AZZC01	4	6513	6328	1/14/14	3/9/17	Scaffold	Broad Institute	SAMN02360754	GCA_000520175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/175/GCA_000520175.1_Pseu_aeru_PS50_V1	-	PS50
Acinetobacter baumannii AB_908-12	1221266	PRJNA172677	172677	Proteobacteria	Gammaproteobacteria	3.99262	39	-	AMHV01	115	3848	3709	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471252	GCA_000301395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/395/GCA_000301395.1_ASM30139v1	-	AB_908-12
Streptococcus agalactiae CCUG 49100	1105271	PRJNA86267	86267	Terrabacteria group	Firmicutes	2.09158	35.3	-	ANDR01	21	2161	2063	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991089	GCA_000310785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/785/GCA_000310785.1_ASM31078v1	-	CCUG 49100
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.2184	40.9	-	CEHW01	147	2177	2049	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233963	GCA_000943175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/175/GCA_000943175.1_Velvet_assembly	-	LS9Y
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.23531	58.5	-	MTCQ01	318	6013	5492	4/27/17	6/9/17	Scaffold	Massey University	SAMN06197031	GCA_002174875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/875/GCA_002174875.1_ASM217487v1	28369338	C3
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.45373	38.3	-	FJBA01	40	3162	3010	2/20/16	3/27/17	Contig	SC	SAMEA2059986	GCA_900053685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/685/GCA_900053685.1_10771_1_45	-	2531STDY5467326
Shigella sonnei 1DT-1	1353978	PRJNA210598	210598	Proteobacteria	Gammaproteobacteria	4.89013	50.8	-	AURV01	255	5245	4800	9/16/13	2/22/17	Scaffold	CSIR-IMTECH	SAMN02469676	GCA_000467205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/205/GCA_000467205.1_Shigella_sonnei_strain_1DT-1	-	1DT-1
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.30341	66.9	-	MUPS01	119	7896	7484	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001800	GCA_001994545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/545/GCA_001994545.1_ASM199454v1	-	VC2386
Burkholderia pseudomallei TSV28	1439860	PRJNA231465	231465	Proteobacteria	Betaproteobacteria	7.22668	68.1	-	JQHU01	191	7524	6850	11/11/14	3/25/17	Contig	Los Alamos National Laboratory	SAMN02999681	GCA_000775085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/085/GCA_000775085.1_BGZ_8	25676747	TSV28
Vibrio cholerae O1 str. 2011EL-1137	1124483	PRJNA73589	73589	Proteobacteria	Gammaproteobacteria	4.01802	47.5	-	AHGJ01	72	3811	3673	12/12/11	3/22/17	Contig	Public Health Agency of Canada	SAMN00765520	GCA_000237645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/645/GCA_000237645.2_ASM23764v2	22099115	2011EL-1137
Clostridioides difficile P32	1151414	PRJNA86003	86003	Terrabacteria group	Firmicutes	4.02726	28.3	-	AVMG01	44	3736	3497	8/20/13	3/15/17	Contig	Institute for Genome Sciences	SAMN01766703	GCA_000451805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/805/GCA_000451805.1_ASM45180v1	-	P32
Vibrio parahaemolyticus S047	1394594	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.08412	45.2	-	AWLO01	612	4902	4682	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338908	GCA_000491235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/235/GCA_000491235.1_S047	-	S047
Klebsiella pneumoniae BIDMC 18D	1328415	PRJNA202026	202026	Proteobacteria	Gammaproteobacteria	5.72226	56.9	-	JCMZ01	16	5769	5467	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138645	GCA_000567285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/285/GCA_000567285.1_Kleb_pneu_BIDMC_18D_V2	-	BIDMC 18D
Enterococcus faecalis EnGen0250	1158634	PRJNA88895	88895	Terrabacteria group	Firmicutes	2.8202	37.7	-	AJBM01	3	2813	2683	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809140	GCA_000394395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/395/GCA_000394395.1_Ente_faec_Com_6_V1	-	Com 6
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14825	52.4	-	CIGA01	78	2511	2193	4/21/15	4/11/17	Contig	SC	SAMEA1690329	GCA_001354655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/655/GCA_001354655.1_8727_8_35	-	GCGS131
Enterococcus faecium EnGen0177	1157472	PRJNA88373	88373	Terrabacteria group	Firmicutes	3.08116	37.8	-	AIVC01	35	3181	2942	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809005	GCA_000395825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/825/GCA_000395825.1_Ente_faec_VRE_108_V1	-	VRE 108
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12919	41.2	-	CVYG01	78	2073	1879	6/23/15	3/26/17	Contig	SC	SAMEA1033021	GCA_001179185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/185/GCA_001179185.1_6830_4_77	-	EQUI0222
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.64928	30.3	chromosome:NZ_CP010489.1/CP010489.1	-	1	1744	1608	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246045	GCA_001506465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/465/GCA_001506465.1_ASM150646v1	-	CJ677CC530
Lactobacillus plantarum	1590	PRJNA279953	279953	Terrabacteria group	Firmicutes	5.33591	44.8	-	LBDE01	2660	7172	5040	5/18/15	5/18/15	Contig	Federal State Scientific-Industrial Company MICROGEN	SAMN03452285	GCA_001010255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/255/GCA_001010255.1_ASM101025v1	-	38
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.36989	59.7	-	FCFQ01	17	5093	4924	1/21/16	3/27/17	Scaffold	SC	SAMEA2274101	GCA_001538705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/705/GCA_001538705.1_12045_8_23	-	2880STDY5683032
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68128	31.3	-	FAYF01	28	1737	1639	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683025	GCA_001487325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/325/GCA_001487325.1_H131800148	-	n/a
Enterobacter cloacae	550	PRJNA393769	393769	Proteobacteria	Gammaproteobacteria	4.70594	55.3	-	NPNX01	43	4572	4374	8/22/17	8/24/17	Scaffold	National University of Singapore and Genome Institute of Singapore	SAMN07448195	GCA_002266405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/405/GCA_002266405.1_ASM226640v1	-	DS2686
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96702	64.2	-	FSAW01	18	4911	4770	12/14/16	3/21/17	Contig	SC	SAMEA2068797	GCA_900131715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/715/GCA_900131715.1_10665_4_30	-	285
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.41031	67.3	-	LPJH01	105	6761	6411	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449586	GCA_001532785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/785/GCA_001532785.1_ASM153278v1	-	MSMB2180WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.22287	54.9	-	LRJW01	137	5149	4879	1/22/16	3/27/17	Contig	JCVI	SAMN04430990	GCA_001524915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/915/GCA_001524915.1_ASM152491v1	-	SMART_1260
Pseudomonas sp. TAA207	1729582	PRJNA297149	297149	Proteobacteria	Gammaproteobacteria	4.9002	57.3	-	LLWJ01	72	4392	4234	1/22/16	4/11/17	Contig	University of Florence	SAMN04166964	GCA_001529285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/285/GCA_001529285.1_ASM152928v1	-	TAA207
Streptomyces sp. NRRL S-325	1463899	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.55883	71.1	-	JOIW01	53	6729	6424	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645517	GCA_000721595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/595/GCA_000721595.1_ASM72159v1	-	NRRL S-325
Bacillus sp. 112mf	1761752	PRJEB16636	349935	Terrabacteria group	Firmicutes	5.81007	35.2	-	FNRB01	75	6213	5773	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488146	GCA_900107515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/515/GCA_900107515.1_IMG-taxon_2639762568_annotated_assembly	-	112MF
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.84924	27.9	-	FMHE01	101	3759	3675	8/16/16	8/16/16	Scaffold	SC	SAMEA3545266	GCA_900066245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/245/GCA_900066245.1_13414_6_42	-	-
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.50722	30	-	FMDS01	64	2613	2557	8/16/16	8/16/16	Scaffold	SC	SAMEA3545282	GCA_900066285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/285/GCA_900066285.1_13414_6_58	-	-
Bacillus sp. cl115	1761759	PRJEB16635	349936	Terrabacteria group	Firmicutes	5.59811	35.1	-	FNQU01	55	6009	5655	10/22/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488575	GCA_900107565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/565/GCA_900107565.1_IMG-taxon_2639762527_annotated_assembly	-	CL115
Streptomyces sp. NRRL S-37	1463903	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.22983	72	-	JOIZ01	179	7300	6924	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645520	GCA_000721605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/605/GCA_000721605.1_ASM72160v1	-	NRRL S-37
Pseudomonas sp. TAD18	1729583	PRJNA297151	297151	Proteobacteria	Gammaproteobacteria	4.91759	57.2	-	LLWI01	82	4404	4249	1/22/16	4/11/17	Contig	University of Florence	SAMN04166965	GCA_001529305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/529/305/GCA_001529305.1_ASM152930v1	-	TAD18
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.04272	55.4	-	LRJY01	76	4969	4740	1/22/16	3/27/17	Contig	JCVI	SAMN04430988	GCA_001524965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/965/GCA_001524965.1_ASM152496v1	-	SMART_1306
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.0872	67.4	-	LPJI01	114	6426	6074	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449587	GCA_001532805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/805/GCA_001532805.1_ASM153280v1	-	MSMB2179WGS
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.83039	64.2	-	FVDE01	11	4816	4701	3/10/17	3/18/17	Contig	SC	SAMEA1966485	GCA_900131725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/725/GCA_900131725.1_10665_4_32	-	287
Enterobacter cloacae	550	PRJNA393769	393769	Proteobacteria	Gammaproteobacteria	4.87754	54.7	-	NPNI01	37	4721	4526	8/30/17	9/1/17	Scaffold	National University of Singapore and Genome Institute of Singapore	SAMN07448210	GCA_002278155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/155/GCA_002278155.1_ASM227815v1	-	DS8140
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.88647	31.1	-	FBMO01	46	2008	1903	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683393	GCA_001487345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/345/GCA_001487345.1_EC3444	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.01133	60.1	-	FCHH01	15	4756	4600	1/21/16	3/27/17	Scaffold	SC	SAMEA2273925	GCA_001538725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/725/GCA_001538725.1_12082_2_60	-	2880STDY5682852
Lactobacillus plantarum	1590	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.03282	43.3	-	DHCO01	158	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451821	GCA_002398245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/245/GCA_002398245.1_ASM239824v1	28894102	-
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.64304	30.3	chromosome:NZ_CP010490.1/CP010490.1	-	1	1715	1578	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246047	GCA_001506485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/485/GCA_001506485.1_ASM150648v1	-	CJ677CC532
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12703	41.2	-	CWBC01	75	2046	1874	6/23/15	3/26/17	Contig	SC	SAMEA1033022	GCA_001179205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/205/GCA_001179205.1_6903_4_58	-	EQUI0107
Enterococcus faecium EnGen0178	1157473	PRJNA88375	88375	Terrabacteria group	Firmicutes	3.1655	38	-	AIVD01	42	3232	2982	5/3/13	4/10/17	Scaffold	Broad Institute	SAMN00809006	GCA_000395845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/845/GCA_000395845.1_Ente_faec_VRE_110_V1	-	VRE 110
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.09873	52.6	-	CFSN01	79	2461	2135	3/15/15	4/11/17	Contig	SC	SAMEA1690331	GCA_001354675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/675/GCA_001354675.1_8289_2_96	-	GCGS096
Enterococcus faecalis EnGen0299	1158637	PRJNA88995	88995	Terrabacteria group	Firmicutes	2.93373	37.6	-	AJDH01	11	2998	2810	5/3/13	4/10/17	Scaffold	Broad Institute	SAMN00809221	GCA_000394455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/455/GCA_000394455.1_Ente_faec_UAA409pIP819_V1	-	UAA409
Klebsiella pneumoniae BIDMC 18A	1328412	PRJNA202023	202023	Proteobacteria	Gammaproteobacteria	5.64976	57.2	-	JCNA01	7	5745	5491	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138642	GCA_000567305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/305/GCA_000567305.1_Kleb_pneu_BIDMC_18A_V2	-	BIDMC 18A
Vibrio parahaemolyticus S046	1394593	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.23347	45.2	-	AWLP01	981	5029	4693	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338907	GCA_000491255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/255/GCA_000491255.1_S046	-	S046
Clostridioides difficile P38	1151416	PRJNA86007	86007	Terrabacteria group	Firmicutes	4.12389	28.7	-	AVMH01	67	3911	3725	8/20/13	3/15/17	Contig	Institute for Genome Sciences	SAMN01766707	GCA_000451825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/825/GCA_000451825.1_ASM45182v1	-	P38
Vibrio cholerae O1 str. 2011V-1021	1124485	PRJNA73589	73589	Proteobacteria	Gammaproteobacteria	4.01185	47.5	-	AHGK01	95	3801	3656	12/12/11	3/22/17	Contig	Public Health Agency of Canada	SAMN00765521	GCA_000237665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/665/GCA_000237665.2_ASM23766v2	22099115	2011V-1021
Burkholderia pseudomallei TSV5	1439861	PRJNA231466	231466	Proteobacteria	Betaproteobacteria	7.18504	68.1	-	JQGY01	172	7448	6810	11/11/14	3/25/17	Contig	Los Alamos National Laboratory	SAMN03001958	GCA_000775095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/095/GCA_000775095.1_BGZ_9	25676747	TSV5
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.91814	67	-	MUPU01	136	7525	7110	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001802	GCA_001994555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/555/GCA_001994555.1_ASM199455v1	-	VC2449
Shigella sonnei	624	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.7644	50.9	-	JVNM01	215	4951	4587	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03197464	GCA_001063115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/115/GCA_001063115.1_ASM106311v1	26230489	271_SSON
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.60551	38.2	-	FJBH01	44	3323	3171	2/20/16	3/27/17	Contig	SC	SAMEA2058277	GCA_900053695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/695/GCA_900053695.1_10771_1_16	-	2531STDY5467297
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.38994	58.5	-	MTHP01	386	6303	5545	4/28/17	6/9/17	Scaffold	Massey University	SAMN06197054	GCA_002174995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/995/GCA_002174995.1_ASM217499v1	28369338	C16
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.18983	41	-	CEGW01	151	2205	2057	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234090	GCA_000943215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/215/GCA_000943215.1_Velvet_assembly	-	S96O
Streptococcus agalactiae LMG 15081	1105272	PRJNA86269	86269	Terrabacteria group	Firmicutes	2.04052	35.2	-	ANDS01	16	2092	1984	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991091	GCA_000310805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/805/GCA_000310805.1_ASM31080v1	-	LMG 15081
Acinetobacter baumannii AB_909-01-7	1221269	PRJNA172680	172680	Proteobacteria	Gammaproteobacteria	3.79069	38.9	-	AMHY01	117	3619	3490	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471281	GCA_000301415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/415/GCA_000301415.1_ASM30141v1	-	AB_909-01-7
Pseudomonas aeruginosa PS42	1402581	PRJNA219943	219943	Proteobacteria	Gammaproteobacteria	7.53221	65.3	-	AZZD01	19	7256	6952	1/14/14	3/15/17	Scaffold	Broad Institute	SAMN02360753	GCA_000520195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/195/GCA_000520195.1_Pseu_aeru_PS42_V1	-	PS42
Leptospira interrogans serovar Copenhageni str. Fiocruz LV3373	996854	PRJNA63807	63807	Spirochaetes	Spirochaetia	4.54728	35	-	AFLG01	368	4070	3729	6/7/11	5/18/17	Scaffold	J. Craig Venter Institute	SAMN00254359	GCA_000216615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/615/GCA_000216615.2_CLC_glsol152	-	Fiocruz LV3373
Streptococcus pyogenes ABC020032057	1439068	PRJNA233139	233139	Terrabacteria group	Firmicutes	1.8275	38.4	-	JJKK01	6	1892	1782	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567488	GCA_000628445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/445/GCA_000628445.1_Stre_pyog_ABC020032057_V1	-	ABC020032057
Neisseria meningitidis NM133	1145145	PRJNA83503	83503	Proteobacteria	Betaproteobacteria	2.21162	51.8	-	APTF01	153	2575	2186	5/1/13	3/21/17	Contig	IGS	SAMN01780095	GCA_000386565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/565/GCA_000386565.2_ASM38656v2	-	NM133
Helicobacter pylori Hp P-74	992091	PRJNA64209	64209	Proteobacteria	delta/epsilon subdivisions	1.62238	39	-	AKPX01	2	1600	1460	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778888	GCA_000274345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/345/GCA_000274345.1_ASM27434v1	23661595	Hp P-74
Streptococcus pneumoniae 2070531	914142	PRJNA59927	59927	Terrabacteria group	Firmicutes	2.13011	39.6	-	ALBD01	52	2391	2120	7/16/12	3/8/17	Contig	"Academic Medical Center Amsterdam, The Netherlands"	SAMN02471525	GCA_000278885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/885/GCA_000278885.1_ASM27888v1	-	2070531
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.66605	30.3	chromosome:NZ_CP010492.1/CP010492.1	-	1	1768	1630	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246046	GCA_001506525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/525/GCA_001506525.1_ASM150652v1	-	CJ677CC531
Mycobacterium tuberculosis 2091HD	1438846	PRJNA233373	233373	Terrabacteria group	Actinobacteria	4.41838	65.6	-	JKAZ01	98	4336	4131	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02567721	GCA_000649415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/415/GCA_000649415.1_Myco_tube_2091HD_V1	-	2091HD
Bacillus cereus	1396	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.86063	35	-	LOQA01	198	6187	5825	3/9/16	3/27/17	Contig	Cornell University	SAMN03800032	GCA_001583875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/875/GCA_001583875.1_ASM158387v1	-	FSL W8-0640
Staphylococcus epidermidis	1282	PRJNA319642	319642	Terrabacteria group	Firmicutes	2.66774	31.8	-	LYSD01	73	2715	2562	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04962892	GCA_001659065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/065/GCA_001659065.1_ASM165906v1	-	B59
Listeria monocytogenes serotype 4bV str. LS642	1389485	PRJNA215746	215746	Terrabacteria group	Firmicutes	2.94347	37.9	-	AVQM01	24	3002	2913	9/11/13	2/26/17	Contig	US FDA	SAMN02415231	GCA_000465735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/735/GCA_000465735.1_LmonocytogenesLS642	24136844	LS642
Yersinia pestis CMCC31004	755920	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.41374	48.1	-	ADQR01	1229	4205	3877	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403040	GCA_000324105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/105/GCA_000324105.1_ASM32410v1	23271803	CMCC31004
Campylobacter jejuni subsp. jejuni xy259	1111072	PRJEA76201	76201	Proteobacteria	delta/epsilon subdivisions	1.70978	30.3	-	CAFR01	68	1827	1700	1/10/12	3/15/17	Contig	"Hannover Medical School, Institute for Microbiology"	SAMEA2272575	GCA_000285675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/675/GCA_000285675.1_ASM28567v1	-	xy259
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.64498	30.3	chromosome:NZ_CP010493.1/CP010493.1	-	1	1723	1580	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246024	GCA_001506545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/545/GCA_001506545.1_ASM150654v1	-	CJ677CC062
Staphylococcus aureus M0066	1157009	PRJNA88575	88575	Terrabacteria group	Firmicutes	2.91755	32.9	-	AIVV01	6	3084	2921	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792133	GCA_000360085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/085/GCA_000360085.1_Stap_aure_M0066_V1	-	M0066
Staphylococcus aureus M0077	1158509	PRJNA88927	88927	Terrabacteria group	Firmicutes	2.93786	33.1	-	AJCB01	7	3057	2894	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809160	GCA_000360105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/105/GCA_000360105.1_Stap_aure_M0077_V1	-	M0077
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.67599	30.3	chromosome:NZ_CP010496.1/CP010496.1	-	1	1770	1626	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246012	GCA_001506585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/585/GCA_001506585.1_ASM150658v1	-	CJ677CC032
Campylobacter jejuni subsp. jejuni RB922	1111073	PRJEA76203	76203	Proteobacteria	delta/epsilon subdivisions	1.71532	30.5	-	CAFS01	156	1856	1708	1/10/12	3/15/17	Contig	"Hannover Medical School, Institute for Microbiology"	SAMEA2271955	GCA_000285695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/695/GCA_000285695.1_ASM28569v1	-	RB922
Yersinia pestis CMCC347001	755921	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.51495	47.7	-	ADQS01	1207	4354	3974	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403041	GCA_000324125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/125/GCA_000324125.1_ASM32412v1	23271803	CMCC347001
Listeria monocytogenes serotype 4bV str. LS643	1389486	PRJNA215747	215747	Terrabacteria group	Firmicutes	2.88131	37.9	-	AVQN01	30	2903	2825	9/11/13	2/26/17	Contig	US FDA	SAMN02415232	GCA_000465755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/755/GCA_000465755.1_Lmonocytogenes4bV	24136844	LS643
Staphylococcus epidermidis	1282	PRJNA319642	319642	Terrabacteria group	Firmicutes	2.67498	31.8	-	LYSE01	79	2737	2565	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04962893	GCA_001659075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/075/GCA_001659075.1_ASM165907v1	-	B2731
Bacillus cereus	1396	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.91668	35.2	-	LOMN01	349	6432	5875	3/9/16	3/27/17	Contig	Cornell University	SAMN03800019	GCA_001583925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/925/GCA_001583925.1_ASM158392v1	-	FSL K6-0067
Mycobacterium tuberculosis 2543MS	1438870	PRJNA233374	233374	Terrabacteria group	Actinobacteria	4.40972	65.6	-	JKAY01	84	4335	4126	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02567722	GCA_000649435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/435/GCA_000649435.1_Myco_tube_2543MS_V1	-	2543MS
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.64519	30.3	chromosome:NZ_CP010500.1/CP010500.1	-	1	1726	1583	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246043	GCA_001506665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/665/GCA_001506665.1_ASM150666v1	-	CJ677CC528
Streptococcus pneumoniae 2061376	914129	PRJNA59901	59901	Terrabacteria group	Firmicutes	2.06769	39.5	-	ALBG01	27	2288	2015	7/16/12	3/8/17	Contig	"Academic Medical Center Amsterdam, The Netherlands"	SAMN02471532	GCA_000278945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/945/GCA_000278945.1_ASM27894v1	-	2061376
Helicobacter pylori Hp H-5b	992092	PRJNA64211	64211	Proteobacteria	delta/epsilon subdivisions	1.70853	39	-	AKQF01	11	1663	1488	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778873	GCA_000274365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/365/GCA_000274365.1_ASM27436v1	23661595	Hp H-5b
Neisseria meningitidis NM3222	1145186	PRJNA83585	83585	Proteobacteria	Betaproteobacteria	2.18567	51.8	-	APUU01	150	2534	2112	5/1/13	3/21/17	Contig	IGS	SAMN01780137	GCA_000386585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/585/GCA_000386585.2_ASM38658v2	-	NM3222
Streptococcus pyogenes ABC020032535	1439074	PRJNA233142	233142	Terrabacteria group	Firmicutes	1.83585	38.5	-	JJKL01	2	1891	1754	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567491	GCA_000628465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/465/GCA_000628465.1_Stre_pyog_ABC020032535_V1	-	ABC020032535
Leptospira interrogans serovar Copenhageni str. Fiocruz LV3323	996853	PRJNA63805	63805	Spirochaetes	Spirochaetia	4.55395	35	-	AFLF01	248	4054	3740	6/7/11	5/18/17	Scaffold	J. Craig Venter Institute	SAMN00254358	GCA_000216635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/635/GCA_000216635.2_CLC_glsol151	-	Fiocruz LV3323
Pseudomonas aeruginosa Z61	1402541	PRJNA219902	219902	Proteobacteria	Gammaproteobacteria	6.56465	66	-	AZZE01	5	6146	5953	1/14/14	3/9/17	Scaffold	Broad Institute	SAMN02360713	GCA_000520215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/215/GCA_000520215.1_Pseu_aeru_Z61_V1	-	Z61
Acinetobacter baumannii AB_909-02-7	1221270	PRJNA172681	172681	Proteobacteria	Gammaproteobacteria	3.92964	38.9	-	AMHZ01	98	3777	3649	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471282	GCA_000301435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/435/GCA_000301435.1_ASM30143v1	-	AB_909-02-7
Streptococcus agalactiae LMG 15083	1105273	PRJNA86271	86271	Terrabacteria group	Firmicutes	2.0803	35.3	-	ANDT01	30	2151	2040	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991092	GCA_000310825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/825/GCA_000310825.1_ASM31082v1	-	LMG 15083
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.02777	41.2	-	CEHQ01	76	2019	1919	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233953	GCA_000943255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/255/GCA_000943255.1_Velvet_assembly	-	type strain: LS8
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.17985	58.5	-	MTHT01	341	5901	5398	4/28/17	6/9/17	Scaffold	Massey University	SAMN06197058	GCA_002175055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/055/GCA_002175055.1_ASM217505v1	28369338	C26
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.46458	38.3	-	FJDS01	35	3178	3060	2/20/16	3/27/17	Contig	SC	SAMEA2060132	GCA_900053705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/705/GCA_900053705.1_10060_4_95	-	2531STDY5467376
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.51866	50.8	-	CWYJ01	379	4999	4317	7/16/15	2/24/17	Scaffold	SC	SAMEA2445711	GCA_001245685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/685/GCA_001245685.1_12971_8_30	-	H094200294
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.88013	67.1	-	MUQK01	128	7559	7116	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001818	GCA_001994595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/595/GCA_001994595.1_ASM199459v1	-	VC9040
Burkholderia pseudomallei TSV32	1439859	PRJNA231460	231460	Proteobacteria	Betaproteobacteria	7.20224	68.1	-	JQHT01	181	7499	6859	11/11/14	3/25/17	Contig	Los Alamos National Laboratory	SAMN02999667	GCA_000775105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/105/GCA_000775105.1_BGZ_7	25676747	TSV32
Vibrio cholerae O1 str. 3500-05	1124472	PRJNA73589	73589	Proteobacteria	Gammaproteobacteria	4.01283	47.5	-	AHGL01	79	3791	3660	12/12/11	3/22/17	Contig	Public Health Agency of Canada	SAMN00765522	GCA_000237685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/685/GCA_000237685.2_ASM23768v2	22099115	3500-05
Clostridioides difficile P36	1151418	PRJNA86011	86011	Terrabacteria group	Firmicutes	4.04821	28.2	-	AVMI01	40	3759	3589	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766705	GCA_000451845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/845/GCA_000451845.2_ASM45184v2	-	P36
Vibrio parahaemolyticus S045	1394592	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.04275	45.3	-	AWLQ01	518	4784	4598	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338906	GCA_000491275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/275/GCA_000491275.1_S045	-	S045
Klebsiella pneumoniae BIDMC 14	1328410	PRJNA202018	202018	Proteobacteria	Gammaproteobacteria	5.89568	56.5	-	JCNB01	10	6039	5773	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138637	GCA_000567325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/325/GCA_000567325.1_Kleb_pneu_BIDMC_14_V2	-	BIDMC 14
Enterococcus faecalis EnGen0301	1158640	PRJNA89001	89001	Terrabacteria group	Firmicutes	3.12761	37.1	-	AJDK01	10	3172	2969	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809242	GCA_000394515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/515/GCA_000394515.1_Ente_faec_UAA702_V1	-	UAA702
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.17294	52.4	-	CHKE01	75	2553	2225	4/21/15	4/11/17	Contig	SC	SAMEA1690346	GCA_001354735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/735/GCA_001354735.1_8727_8_81	-	GCGS177
Enterococcus faecium EnGen0179	1157474	PRJNA88377	88377	Terrabacteria group	Firmicutes	3.10219	37.9	-	AIVE01	31	3176	2947	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809007	GCA_000395865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/865/GCA_000395865.1_Ente_faec_VRE_13_V1	-	VRE 13
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.173	41.2	-	CWBY01	90	2125	1946	6/23/15	3/26/17	Contig	SC	SAMEA1033023	GCA_001179225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/225/GCA_001179225.1_6903_4_72	-	EQUI0121
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.67595	30.3	chromosome:NZ_CP010495.1/CP010495.1	-	1	1779	1636	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246053	GCA_001506685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/685/GCA_001506685.1_ASM150668v1	-	CJ677CC538
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.37614	59.7	-	FCJR01	22	5099	4934	1/21/16	3/27/17	Scaffold	SC	SAMEA2274006	GCA_001538745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/745/GCA_001538745.1_12082_3_35	-	2880STDY5682934
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.77262	31.2	-	FAXZ01	66	1805	1694	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683000	GCA_001487365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/365/GCA_001487365.1_H091320792	-	n/a
Enterobacter cloacae	550	PRJNA393769	393769	Proteobacteria	Gammaproteobacteria	4.76724	54.9	-	NPNK01	46	4623	4390	8/30/17	9/1/17	Scaffold	National University of Singapore and Genome Institute of Singapore	SAMN07448208	GCA_002278165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/165/GCA_002278165.1_ASM227816v1	-	DS31788
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.81776	64.2	-	FVCW01	7	4804	4695	3/10/17	3/18/17	Contig	SC	SAMEA2070552	GCA_900131735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/735/GCA_900131735.1_10665_4_5	-	260
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.40831	67.3	-	LPJJ01	104	6752	6414	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449588	GCA_001532815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/815/GCA_001532815.1_ASM153281v1	-	MSMB2181WGS
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.99852	55.1	-	LRJU01	115	4959	4697	1/22/16	3/27/17	Contig	JCVI	SAMN04430992	GCA_001524975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/975/GCA_001524975.1_ASM152497v1	-	FL-1283
Pseudomonas sp. HUK17	1799359	PRJNA311497	311497	Proteobacteria	Gammaproteobacteria	2.568	65.5	-	LSMW01	15	2343	2288	2/23/16	4/11/17	Contig	Universite d'Auvergne	SAMN04482516	GCA_001566765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/765/GCA_001566765.1_ASM156676v1	27081140	HUK17
Streptomyces sp. NRRL S-384	1463905	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.12961	74.1	-	JOJA01	372	7319	6905	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645521	GCA_000721625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/625/GCA_000721625.1_ASM72162v1	-	NRRL S-384
Bacillus sp. UNCCL13	1502772	PRJEB17100	351348	Terrabacteria group	Firmicutes	4.00458	38.6	-	FOJZ01	23	3997	3850	10/30/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02799634	GCA_900112075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/075/GCA_900112075.1_IMG-taxon_2639762621_annotated_assembly	-	UNCCL13
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.81869	29.3	-	FMEJ01	54	2908	2850	8/16/16	8/16/16	Scaffold	SC	SAMEA3545283	GCA_900066295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/295/GCA_900066295.1_13414_6_59	-	-
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.73692	55.6	-	FMET01	33	2644	2594	8/16/16	8/16/16	Scaffold	SC	SAMEA3545286	GCA_900066315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/315/GCA_900066315.1_13414_6_62	-	-
Bacillus sp. 491mf	1761755	PRJEB17193	351297	Terrabacteria group	Firmicutes	4.9405	35.9	-	FOLV01	91	5143	4820	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488168	GCA_900112415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/415/GCA_900112415.1_IMG-taxon_2636416083_annotated_assembly	-	491MF
Streptomyces sp. NRRL B-24720	1476876	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.42619	69.6	-	JOJO01	171	8499	7982	7/2/14	3/11/17	Contig	University of Illinois	SAMN02645235	GCA_000721715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/715/GCA_000721715.1_ASM72171v1	-	NRRL B-24720
Pseudomonas sp. ABFPK	1636605	PRJNA279658	279658	Proteobacteria	Gammaproteobacteria	6.21904	62.2	-	LQXW01	91	5920	5627	3/10/16	4/12/17	Contig	NHGRI	SAMN03455978	GCA_001586765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/765/GCA_001586765.1_ASM158676v1	-	ABFPK
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.30464	54.9	-	LRJX01	124	5244	4982	1/22/16	3/27/17	Contig	JCVI	SAMN04430989	GCA_001524995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/995/GCA_001524995.1_ASM152499v1	-	SMART_1234
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.75369	67	-	LPJL01	114	7078	6712	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449590	GCA_001532845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/845/GCA_001532845.1_ASM153284v1	-	MSMB2205WGS
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.90597	64.1	-	FVDO01	6	4910	4792	3/10/17	3/18/17	Contig	SC	SAMEA2071358	GCA_900131755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/755/GCA_900131755.1_10665_4_7	-	262
Enterobacter cloacae	550	PRJNA393769	393769	Proteobacteria	Gammaproteobacteria	4.86283	54.8	-	NPNM01	53	4730	4505	8/30/17	9/1/17	Scaffold	National University of Singapore and Genome Institute of Singapore	SAMN07448206	GCA_002278195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/195/GCA_002278195.1_ASM227819v1	-	DS25697
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66055	31.4	-	FAZB01	25	1724	1630	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683035	GCA_001487385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/385/GCA_001487385.1_EC3529	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.15432	59.9	-	FCGQ01	16	4899	4745	1/21/16	3/27/17	Scaffold	SC	SAMEA2273899	GCA_001538765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/765/GCA_001538765.1_12082_2_35	-	2880STDY5682826
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.67123	30.3	chromosome:NZ_CP010502.1/CP010502.1	-	1	1775	1631	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246008	GCA_001506725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/725/GCA_001506725.1_ASM150672v1	-	CJ677CC014
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.13542	41.2	-	CVZF01	79	2080	1898	6/23/15	3/26/17	Contig	SC	SAMEA1033025	GCA_001179245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/245/GCA_001179245.1_6830_4_96	-	HO51380626
Enterococcus faecium EnGen0180	1157475	PRJNA88379	88379	Terrabacteria group	Firmicutes	3.25478	37.7	-	AIVF01	46	3380	3110	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809008	GCA_000395885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/885/GCA_000395885.1_Ente_faec_VRE_84_V1	-	VRE 84
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.1374	52.6	-	CFMG01	67	2510	2182	3/15/15	4/11/17	Contig	SC	SAMEA1690356	GCA_001354775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/775/GCA_001354775.1_8289_2_8	-	GCGS008
Enterococcus faecalis EnGen0297	491075	PRJNA89031	89031	Terrabacteria group	Firmicutes	3.11169	37.3	-	AJDY01	36	3233	3044	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809211	GCA_000394775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/775/GCA_000394775.1_Ente_faec_HH22_V1	-	HH22
Klebsiella pneumoniae BIDMC 13	1328409	PRJNA202017	202017	Proteobacteria	Gammaproteobacteria	5.76464	57	-	JCNC01	29	5878	5595	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138636	GCA_000567345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/345/GCA_000567345.1_Kleb_pneu_BIDMC_13_V1	-	BIDMC 13
Vibrio parahaemolyticus S044	1394591	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.04667	45.3	-	AWLR01	756	4859	4561	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338905	GCA_000491295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/295/GCA_000491295.1_S044	-	S044
Clostridioides difficile P42	1151420	PRJNA86015	86015	Terrabacteria group	Firmicutes	4.18594	28.6	-	AVMJ01	53	3898	3726	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766709	GCA_000451865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/865/GCA_000451865.2_ASM45186v2	-	P42
Vibrio cholerae O1 str. 3546-06	1124473	PRJNA73589	73589	Proteobacteria	Gammaproteobacteria	4.01213	47.5	-	AHGM01	85	3789	3655	12/12/11	3/22/17	Contig	Public Health Agency of Canada	SAMN00765523	GCA_000237705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/705/GCA_000237705.2_ASM23770v2	22099115	3546-06
Burkholderia pseudomallei TSV44	1439858	PRJNA231459	231459	Proteobacteria	Betaproteobacteria	7.13542	68.1	-	JQGX01	143	7432	6804	11/11/14	3/25/17	Contig	Los Alamos National Laboratory	SAMN03001956	GCA_000775115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/115/GCA_000775115.1_BGZ_6	25676747	TSV44
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.15929	67	-	MUQN01	227	7741	7288	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001823	GCA_001994605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/605/GCA_001994605.1_ASM199460v1	-	VC5731
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	5.00972	50.4	-	CXJX01	473	5748	4849	7/16/15	2/24/17	Scaffold	SC	SAMEA2003906	GCA_001245775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/775/GCA_001245775.1_8290_4_13	-	95233
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.5815	38.3	-	FJGA01	27	3287	3173	2/20/16	3/27/17	Contig	SC	SAMEA2080606	GCA_900053715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/715/GCA_900053715.1_10625_2_11	-	2532STDY5467484
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.20737	58.4	-	MTHU01	364	5969	5434	4/28/17	6/9/17	Scaffold	Massey University	SAMN06197059	GCA_002175075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/075/GCA_002175075.1_ASM217507v1	28369338	C27
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03704	41.2	-	CEKK01	69	2020	1922	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233995	GCA_000943295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/295/GCA_000943295.1_Velvet_assembly	-	S12V
Streptococcus agalactiae LMG 15084	1105274	PRJNA86273	86273	Terrabacteria group	Firmicutes	2.07258	35.3	-	ANDU01	23	2138	2038	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991093	GCA_000310845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/845/GCA_000310845.1_ASM31084v1	-	LMG 15084
Acinetobacter baumannii AB_TG2022	1221275	PRJNA172687	172687	Proteobacteria	Gammaproteobacteria	3.93609	39.1	-	AMIF01	198	3821	3666	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471263	GCA_000301455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/455/GCA_000301455.1_ASM30145v1	-	AB_TG2022
Pseudomonas aeruginosa BWHPSA048	1402540	PRJNA219901	219901	Proteobacteria	Gammaproteobacteria	5.951	66.4	-	AZZF01	2	5645	5502	1/14/14	3/9/17	Scaffold	Broad Institute	SAMN02360712	GCA_000520235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/235/GCA_000520235.1_Pseu_aeru_BWHPSA048_V1	-	BWHPSA048
Leptospira interrogans serovar Copenhageni str. Fiocruz LV3244	996852	PRJNA63803	63803	Spirochaetes	Spirochaetia	4.51405	35	-	AFLE01	1355	4338	3616	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254357	GCA_000216655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/655/GCA_000216655.2_CLC_glsol144	-	Fiocruz LV3244
Streptococcus pyogenes ABC020038545	1439107	PRJNA233155	233155	Terrabacteria group	Firmicutes	1.83118	38.5	-	JJKM01	2	1880	1759	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567504	GCA_000628485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/485/GCA_000628485.1_Stre_pyog_ABC020038545_V1	-	ABC020038545
Neisseria meningitidis NM3131	1145187	PRJNA83587	83587	Proteobacteria	Betaproteobacteria	2.13632	51.8	-	APUV01	158	2469	2058	5/1/13	3/21/17	Contig	IGS	SAMN01780138	GCA_000386605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/605/GCA_000386605.2_ASM38660v2	-	NM3131
Helicobacter pylori Hp P-11b	992106	PRJNA64239	64239	Proteobacteria	delta/epsilon subdivisions	1.69248	39.1	-	AKQH01	11	1699	1537	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778895	GCA_000274385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/385/GCA_000274385.2_ASM27438v2	-	Hp P-11b
Streptococcus pneumoniae 2080076	914144	PRJNA59931	59931	Terrabacteria group	Firmicutes	2.0504	39.6	-	ALBH01	25	2267	2004	7/16/12	3/8/17	Contig	"Academic Medical Center Amsterdam, The Netherlands"	SAMN02471530	GCA_000278965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/965/GCA_000278965.1_ASM27896v1	-	2080076
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.64394	30.3	chromosome:NZ_CP010506.1/CP010506.1	-	1	1721	1576	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246042	GCA_001506805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/805/GCA_001506805.1_ASM150680v1	-	CJ677CC527
Mycobacterium tuberculosis 2541MS	1438868	PRJNA233376	233376	Terrabacteria group	Actinobacteria	4.41165	65.6	-	JKAW01	83	4334	4130	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02567724	GCA_000649455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/455/GCA_000649455.1_Myco_tube_2541MS_V1	-	2541MS
Bacillus cereus	1396	PRJNA288461	288461	Terrabacteria group	Firmicutes	6.86498	34.5	-	LOMO01	301	7368	6856	3/9/16	3/27/17	Contig	Cornell University	SAMN03800021	GCA_001583935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/935/GCA_001583935.1_ASM158393v1	-	FSL K6-0073
Staphylococcus epidermidis	1282	PRJNA319642	319642	Terrabacteria group	Firmicutes	2.74009	31.8	-	LYSG01	88	2797	2653	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04962895	GCA_001659105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/105/GCA_001659105.1_ASM165910v1	-	B7234
Listeria monocytogenes serotype 4bV str. LS644	1389488	PRJNA215749	215749	Terrabacteria group	Firmicutes	2.88176	37.9	-	AVQO01	32	2912	2823	9/11/13	2/26/17	Contig	US FDA	SAMN02415233	GCA_000465775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/775/GCA_000465775.1_Lmonocytogenes4bV	24136844	LS644
Yersinia pestis CMCC348002	755922	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.57141	47.6	-	ADQT01	846	4349	4087	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403042	GCA_000324145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/145/GCA_000324145.1_ASM32414v1	23271803	CMCC348002
Campylobacter jejuni subsp. jejuni 6399	1111074	PRJEA76205	76205	Proteobacteria	delta/epsilon subdivisions	1.62703	30.5	-	CAFT01	43	1712	1610	1/10/12	3/15/17	Contig	"Hannover Medical School, Institute for Microbiology"	SAMEA2272528	GCA_000285715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/715/GCA_000285715.1_ASM28571v1	-	6399
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.66722	30.3	chromosome:NZ_CP010508.1/CP010508.1	-	1	1772	1634	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246038	GCA_001506845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/845/GCA_001506845.1_ASM150684v1	-	CJ677CC523
Staphylococcus aureus M0102	1157010	PRJNA88577	88577	Terrabacteria group	Firmicutes	2.83495	32.8	-	AIVW01	6	2960	2792	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792134	GCA_000360125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/125/GCA_000360125.1_Stap_aure_M0102_V1	-	M0102
Staphylococcus aureus M0103	1157011	PRJNA88579	88579	Terrabacteria group	Firmicutes	2.93125	33	-	AIVX01	11	3070	2896	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00792135	GCA_000360145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/145/GCA_000360145.1_Stap_aure_M0103_V1	-	M0103
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.64065	30.3	chromosome:NZ_CP010510.1/CP010510.1	-	1	1713	1578	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246017	GCA_001506885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/885/GCA_001506885.1_ASM150688v1	-	CJ677CC040
Campylobacter jejuni subsp. jejuni 04197	1111075	PRJEA76207	76207	Proteobacteria	delta/epsilon subdivisions	1.70134	30.4	-	CAFU01	83	1854	1690	1/10/12	3/15/17	Contig	"Hannover Medical School, Institute for Microbiology"	SAMEA2272144	GCA_000285735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/735/GCA_000285735.1_ASM28573v1	-	4197
Yersinia pestis CMCC38001	755923	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.48326	47.6	-	ADQU01	1030	4262	3996	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403043	GCA_000324165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/165/GCA_000324165.1_ASM32416v1	23271803	CMCC38001
Listeria monocytogenes serotype 4bV str. LS645	1389487	PRJNA215748	215748	Terrabacteria group	Firmicutes	2.88113	37.9	-	AVQP01	24	2903	2825	9/11/13	2/26/17	Contig	US FDA	SAMN02415234	GCA_000465795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/795/GCA_000465795.1_Lmonocytogenes4bV	24136844	LS645
Staphylococcus epidermidis	1282	PRJNA319642	319642	Terrabacteria group	Firmicutes	2.7608	31.8	-	LYSH01	91	2815	2666	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04962896	GCA_001659125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/125/GCA_001659125.1_ASM165912v1	-	B10873
Bacillus cereus	1396	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.64835	35.3	-	LOMP01	159	5790	5455	3/9/16	3/27/17	Contig	Cornell University	SAMN03800022	GCA_001583955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/955/GCA_001583955.1_ASM158395v1	-	FSL K6-0267
Mycobacterium tuberculosis 2089HD	1438845	PRJNA233377	233377	Terrabacteria group	Actinobacteria	4.40103	65.6	-	JKAV01	85	4329	4125	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02567725	GCA_000649475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/475/GCA_000649475.1_Myco_tube_2089HD_V1	-	2089HD
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.64269	30.3	chromosome:NZ_CP010461.1/CP010461.1	-	1	1717	1578	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246007	GCA_001507005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/005/GCA_001507005.1_ASM150700v1	-	CJ677CC013
Streptococcus pneumoniae 2061617	914130	PRJNA59903	59903	Terrabacteria group	Firmicutes	2.07971	39.6	-	ALBI01	23	2316	2062	7/16/12	3/8/17	Contig	"Academic Medical Center Amsterdam, The Netherlands"	SAMN02471541	GCA_000278985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/985/GCA_000278985.1_ASM27898v1	-	2061617
Helicobacter pylori Hp P-13b	992107	PRJNA64241	64241	Proteobacteria	delta/epsilon subdivisions	1.71153	39	-	AKQI01	8	1689	1520	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778900	GCA_000274405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/405/GCA_000274405.1_ASM27440v1	-	Hp P-13b
Neisseria meningitidis NM3144	1145188	PRJNA83589	83589	Proteobacteria	Betaproteobacteria	2.1515	51.8	-	APUW01	137	2483	2070	5/1/13	3/21/17	Contig	IGS	SAMN01780143	GCA_000386625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/625/GCA_000386625.2_ASM38662v2	-	NM3144
Streptococcus pyogenes ABC020048606	1439185	PRJNA233175	233175	Terrabacteria group	Firmicutes	1.81474	38.4	-	JJKN01	5	1848	1736	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567524	GCA_000628505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/505/GCA_000628505.1_Stre_pyog_ABC020048606_V1	-	ABC020048606
Leptospira interrogans serovar Copenhageni str. Fiocruz LV3096	996851	PRJNA63801	63801	Spirochaetes	Spirochaetia	4.55438	35	-	AFLD01	291	4062	3736	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254356	GCA_000216675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/675/GCA_000216675.2_CLC_glsol142	-	Fiocruz LV3096
Pseudomonas aeruginosa BWHPSA047	1402539	PRJNA219900	219900	Proteobacteria	Gammaproteobacteria	6.38776	66.3	-	AZZG01	3	6077	5900	1/14/14	3/9/17	Scaffold	Broad Institute	SAMN02360711	GCA_000520255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/255/GCA_000520255.1_Pseu_aeru_BWHPSA047_V1	-	BWHPSA047
Acinetobacter baumannii AB_TG2023	1221276	PRJNA172688	172688	Proteobacteria	Gammaproteobacteria	3.94428	39.1	-	AMIG01	175	3814	3662	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471239	GCA_000301475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/475/GCA_000301475.1_ASM30147v1	-	AB_TG2023
Streptococcus agalactiae BSU252	1105277	PRJNA86291	86291	Terrabacteria group	Firmicutes	1.98691	35.1	-	ANDX01	19	2049	1946	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991119	GCA_000310865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/865/GCA_000310865.1_ASM31086v1	-	BSU252
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.24223	41.2	-	CEIE01	132	2178	2053	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233960	GCA_000943315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/315/GCA_000943315.1_Velvet_assembly	-	LS9R
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.18555	58.5	-	MTHS01	338	5970	5437	4/28/17	6/9/17	Scaffold	Massey University	SAMN06197057	GCA_002175085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/085/GCA_002175085.1_ASM217508v1	28369338	C24
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.41503	38.3	-	FJHP01	24	3126	3010	2/20/16	3/27/17	Contig	SC	SAMEA2077536	GCA_900053725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/725/GCA_900053725.1_10625_2_46	-	2532STDY5467519
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.67007	50.7	-	CXLF01	441	5245	4499	7/17/15	2/24/17	Scaffold	SC	SAMEA2164637	GCA_001245885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/885/GCA_001245885.1_8290_4_91	-	124561
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.21157	67	-	MURB01	311	7802	7295	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001838	GCA_001994615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/615/GCA_001994615.1_ASM199461v1	-	VC4480
Burkholderia pseudomallei A79C	1439856	PRJNA231211	231211	Proteobacteria	Betaproteobacteria	7.17731	68.1	-	JQHQ01	188	7475	6830	11/12/14	3/25/17	Contig	Los Alamos National Laboratory	SAMN02998014	GCA_000775675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/675/GCA_000775675.1_BGZ_4	25676747	A79C
Vibrio cholerae O1 str. 3554-08	1124487	PRJNA73589	73589	Proteobacteria	Gammaproteobacteria	4.01994	47.5	-	AHGN01	80	3832	3678	12/12/11	3/22/17	Contig	Public Health Agency of Canada	SAMN00765524	GCA_000237725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/725/GCA_000237725.2_ASM23772v2	22099115	3554-08
Clostridioides difficile P45	1151421	PRJNA86017	86017	Terrabacteria group	Firmicutes	4.09735	28.5	-	AVMK01	48	3805	3644	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766710	GCA_000451885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/885/GCA_000451885.2_ASM45188v2	-	P45
Vibrio parahaemolyticus S043	1394590	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.0976	45.2	-	AWLS01	725	4892	4578	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338904	GCA_000491315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/315/GCA_000491315.1_S043	-	S043
Klebsiella pneumoniae BIDMC 12B	1328407	PRJNA202015	202015	Proteobacteria	Gammaproteobacteria	5.91826	57	-	JCND01	10	6094	5793	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138634	GCA_000567365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/365/GCA_000567365.1_Kleb_pneu_BIDMC_12B_V1	-	BIDMC 12B
Enterococcus faecalis EnGen0310 = MMH594	1158653	PRJNA89033	89033	Terrabacteria group	Firmicutes	3.25559	37.1	-	AJDZ01	25	3428	3268	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809212	GCA_000394795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/795/GCA_000394795.1_Ente_faec_MMH594_V1	-	MMH594
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14335	52.4	-	CFRX01	63	2525	2194	3/15/15	4/11/17	Contig	SC	SAMEA1690367	GCA_001354815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/815/GCA_001354815.1_8727_8_77	-	GCGS173
Enterococcus faecium EnGen0181	1157476	PRJNA88381	88381	Terrabacteria group	Firmicutes	2.88093	38	-	AIUR01	29	2941	2758	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809009	GCA_000395905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/905/GCA_000395905.1_Ente_faec_UAA909_V1	-	UAA909
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15227	41.2	-	CWEC01	86	2077	1910	6/24/15	3/26/17	Contig	SC	SAMEA1033026	GCA_001179265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/265/GCA_001179265.1_6903_7_37	-	EQUI0182
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.66915	30.3	chromosome:NZ_CP010462.1/CP010462.1	-	1	1776	1636	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246033	GCA_001507025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/025/GCA_001507025.1_ASM150702v1	-	CJ677CC100
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.71943	59.1	-	FCGE01	146	5631	5320	1/21/16	3/27/17	Scaffold	SC	SAMEA2274095	GCA_001538785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/785/GCA_001538785.1_12045_8_18	-	2880STDY5683025
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65938	31.4	-	FBJD01	28	1714	1626	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683303	GCA_001487405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/405/GCA_001487405.1_EC3357	-	n/a
Enterobacter cloacae	550	PRJNA393769	393769	Proteobacteria	Gammaproteobacteria	4.72697	55.3	-	NPNJ01	39	4667	4450	8/30/17	9/1/17	Scaffold	National University of Singapore and Genome Institute of Singapore	SAMN07448209	GCA_002278205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/205/GCA_002278205.1_ASM227820v1	-	DS36577
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.26942	64.1	-	FSAY01	27	5306	5140	12/14/16	3/21/17	Contig	SC	SAMEA2070553	GCA_900131765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/765/GCA_900131765.1_10665_4_8	-	263
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.17821	67.4	-	LPJN01	107	6446	6099	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449592	GCA_001532865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/532/865/GCA_001532865.1_ASM153286v1	-	MSMB2152WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.12464	55	-	LRJV01	63	5012	4794	1/22/16	3/27/17	Contig	JCVI	SAMN04430991	GCA_001525015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/015/GCA_001525015.1_ASM152501v1	-	SMART_1291
Pseudomonas sp. p21	1825979	PRJNA316593	316593	Proteobacteria	Gammaproteobacteria	5.54745	63.2	-	LWBV01	15	5186	4980	5/12/16	4/12/17	Contig	Fujian Normal Universoty	SAMN04591946	GCA_001642705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/705/GCA_001642705.1_ASM164270v1	-	p21
Streptomyces sp. JS01	1525753	PRJNA256018	256018	Terrabacteria group	Actinobacteria	7.79938	71.6	-	JPWW01	38	7102	6870	8/25/14	3/11/17	Contig	Xiamen university	SAMN02935386	GCA_000743295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/295/GCA_000743295.1_ASM74329v1	25477414	JS01
Bacillus sp. OV322	1882764	PRJEB17197	351293	Terrabacteria group	Firmicutes	4.39436	41	-	FOMA01	22	4353	4143	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05443252	GCA_900112495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/495/GCA_900112495.1_IMG-taxon_2693429828_annotated_assembly	-	OV322
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.65096	45.8	-	FMDR01	63	3454	3395	8/16/16	8/16/16	Scaffold	SC	SAMEA3545291	GCA_900066365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/365/GCA_900066365.1_13414_6_67	-	-
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.33448	44.4	-	FMEV01	41	3217	3170	8/16/16	8/16/16	Scaffold	SC	SAMEA3545292	GCA_900066375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/375/GCA_900066375.1_13414_6_68	-	-
Bacillus sp. UNCCL81	1502755	PRJEB17209	351410	Terrabacteria group	Firmicutes	5.11686	32.9	-	FOMF01	35	4857	4686	10/30/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02799633	GCA_900112535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/535/GCA_900112535.1_IMG-taxon_2593339131_annotated_assembly	-	UNCCL81
Streptomyces sp. CNQ431	1571532	PRJNA266689	266689	Terrabacteria group	Actinobacteria	7.03764	73.1	-	JTCK01	295	6258	5785	12/4/14	3/11/17	Contig	Wuhan University	SAMN03173244	GCA_000797385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/385/GCA_000797385.1_ASM79738v1	25614558	CNQ431
Pseudomonas sp. AU11447	1843184	PRJNA319964	319964	Proteobacteria	Gammaproteobacteria	6.81305	64.6	-	LZDG02	110	6244	6057	6/21/16	4/13/17	Contig	The University of Michigan	SAMN04913700	GCA_001672555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/555/GCA_001672555.2_ASM167255v2	-	AU11447
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.88135	55.2	-	LRIS01	56	4806	4575	1/22/16	3/27/17	Contig	JCVI	SAMN04431020	GCA_001525045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/045/GCA_001525045.1_ASM152504v1	-	SMART_1160
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.21993	67.3	-	LPKU01	88	6549	6186	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449627	GCA_001533035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/035/GCA_001533035.1_ASM153303v1	-	MSMB691WGS
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.85807	64.2	-	FWCR01	10	4855	4731	3/16/17	3/24/17	Contig	SC	SAMEA2071367	GCA_900131905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/905/GCA_900131905.1_10665_4_37	-	292
Enterobacter cloacae	550	PRJNA393769	393769	Proteobacteria	Gammaproteobacteria	4.7832	54.9	-	NPNN01	38	4621	4433	8/30/17	9/1/17	Scaffold	National University of Singapore and Genome Institute of Singapore	SAMN07448205	GCA_002278235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/235/GCA_002278235.1_ASM227823v1	-	DS17594
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.81316	31	-	FBIG01	61	1887	1777	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683279	GCA_001487425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/425/GCA_001487425.1_UNAJL222	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.32758	59.9	-	FCHB01	28	5095	4907	1/21/16	3/27/17	Scaffold	SC	SAMEA2273920	GCA_001538805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/805/GCA_001538805.1_12082_2_55	-	2880STDY5682847
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.6425	30.3	chromosome:NZ_CP010463.1/CP010463.1	-	1	1712	1575	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246037	GCA_001507045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/045/GCA_001507045.1_ASM150704v1	-	CJ677CC522
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.1385	41.2	-	CWCW01	91	2072	1894	6/23/15	3/26/17	Contig	SC	SAMEA1033027	GCA_001179285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/285/GCA_001179285.1_6903_6_17	-	EQUI0162
Enterococcus faecium EnGen0182	1157477	PRJNA88383	88383	Terrabacteria group	Firmicutes	2.7739	38.2	-	AIUS01	20	2835	2597	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809010	GCA_000395925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/925/GCA_000395925.1_Ente_faec_UAA910_V1	-	UAA910
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14695	52.4	-	CFKF01	69	2516	2194	3/15/15	4/11/17	Contig	SC	SAMEA1690398	GCA_001354895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/895/GCA_001354895.1_8289_2_42	-	GCGS042
Enterococcus faecalis EnGen0294	1158654	PRJNA89035	89035	Terrabacteria group	Firmicutes	3.20317	37.2	-	AJEA01	16	3319	3156	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809213	GCA_000394815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/815/GCA_000394815.1_Ente_faec_SF100_V1	-	SF100
Klebsiella pneumoniae BIDMC 12A	1328406	PRJNA202014	202014	Proteobacteria	Gammaproteobacteria	5.81414	57	-	JCNE01	10	5959	5683	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138633	GCA_000567385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/385/GCA_000567385.1_Kleb_pneu_BIDMC_12A_V2	-	BIDMC 12A
Vibrio parahaemolyticus S042	1394589	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.11565	45.3	-	AWLT01	735	4992	4618	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338903	GCA_000491335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/335/GCA_000491335.1_S042	-	S042
Clostridioides difficile P46	1151422	PRJNA86019	86019	Terrabacteria group	Firmicutes	4.12544	28.5	-	AVML01	60	3862	3687	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766711	GCA_000451905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/905/GCA_000451905.2_ASM45190v2	-	P46
Vibrio cholerae O1 str. 3582-05	1124477	PRJNA73589	73589	Proteobacteria	Gammaproteobacteria	3.97563	47.6	-	AHGP01	67	3769	3630	12/12/11	3/22/17	Contig	Public Health Agency of Canada	SAMN00765526	GCA_000237765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/765/GCA_000237765.2_ASM23776v2	22099115	3582-05
Burkholderia pseudomallei A79D	1439857	PRJNA231458	231458	Proteobacteria	Betaproteobacteria	7.16513	68.1	-	JQHR01	165	7459	6823	11/12/14	3/25/17	Contig	Los Alamos National Laboratory	SAMN02998017	GCA_000775685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/685/GCA_000775685.1_BGZ_5	25676747	A79D
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.83403	67	-	MURK01	180	7465	6994	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001848	GCA_001994655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/655/GCA_001994655.1_ASM199465v1	-	VC12599
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.38082	50.9	-	CXED01	492	4655	4149	7/16/15	2/24/17	Scaffold	SC	SAMEA954625	GCA_001246015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/015/GCA_001246015.1_5417_1_1	-	20051272_1361367
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.38965	38.2	-	FJHR01	20	3101	2996	2/20/16	3/27/17	Contig	SC	SAMEA2080617	GCA_900053735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/735/GCA_900053735.1_10625_2_47	-	2532STDY5467520
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.15237	58.5	-	MTHV01	343	5884	5386	4/28/17	6/9/17	Scaffold	Massey University	SAMN06197060	GCA_002175135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/135/GCA_002175135.1_ASM217513v1	28369338	C28
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04904	41.1	-	CEJV01	70	2043	1947	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233996	GCA_000943855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/855/GCA_000943855.1_Velvet_assembly	-	S12W
Streptococcus agalactiae BSU447	1105280	PRJNA86299	86299	Terrabacteria group	Firmicutes	2.13621	35.6	-	ANEA01	45	2227	2080	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991116	GCA_000310885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/885/GCA_000310885.1_ASM31088v1	-	BSU447
Acinetobacter baumannii AB_TG2026	1221277	PRJNA172689	172689	Proteobacteria	Gammaproteobacteria	4.20878	39.5	-	AMIH01	691	4040	3885	10/2/12	5/18/17	Contig	Translational Genomics Research Institute	SAMN02471229	GCA_000301495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/495/GCA_000301495.1_ASM30149v1	-	AB_TG2026
Pseudomonas aeruginosa BWHPSA046	1402538	PRJNA219899	219899	Proteobacteria	Gammaproteobacteria	6.90206	66.1	-	AZZH01	10	6611	6426	1/14/14	3/9/17	Scaffold	Broad Institute	SAMN02360710	GCA_000520275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/275/GCA_000520275.1_Pseu_aeru_BWHPSA046_V1	-	BWHPSA046
Leptospira interrogans serovar Copenhageni str. Fiocruz LV3094	996850	PRJNA63799	63799	Spirochaetes	Spirochaetia	4.5469	35	-	AFLC01	351	4056	3713	6/7/11	5/18/17	Scaffold	J. Craig Venter Institute	SAMN00254355	GCA_000216695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/695/GCA_000216695.2_CLC_glsol141	-	Fiocruz LV3094
Streptococcus pyogenes ABC020050818	1439194	PRJNA233180	233180	Terrabacteria group	Firmicutes	1.81245	38.5	-	JJKO01	2	1864	1740	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567529	GCA_000628525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/525/GCA_000628525.1_Stre_pyog_ABC020050818_V1	-	ABC020050818
Neisseria meningitidis NM3158	1145189	PRJNA83591	83591	Proteobacteria	Betaproteobacteria	2.12791	51.9	-	APUX01	146	2462	2061	5/1/13	3/21/17	Contig	IGS	SAMN01780145	GCA_000386645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/645/GCA_000386645.2_ASM38664v2	-	NM3158
Helicobacter pylori Hp P-15b	992108	PRJNA64243	64243	Proteobacteria	delta/epsilon subdivisions	1.65378	38.9	-	AKQJ01	6	1635	1490	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778874	GCA_000274425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/425/GCA_000274425.2_ASM27442v2	-	Hp P-15b
Streptococcus pneumoniae 2071004	914135	PRJNA59913	59913	Terrabacteria group	Firmicutes	2.10756	39.6	-	ALBJ01	24	2331	2063	7/16/12	3/8/17	Contig	"Academic Medical Center Amsterdam, The Netherlands"	SAMN02471542	GCA_000279005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/005/GCA_000279005.1_ASM27900v1	-	2071004
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.64112	30.3	chromosome:NZ_CP010464.1/CP010464.1	-	1	1715	1575	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246031	GCA_001507065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/065/GCA_001507065.1_ASM150706v1	-	CJ677CC094
Mycobacterium tuberculosis 2088HD	1438844	PRJNA233378	233378	Terrabacteria group	Actinobacteria	4.39767	65.6	-	JKAU01	103	4339	4124	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02567726	GCA_000649495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/495/GCA_000649495.1_Myco_tube_2088HD_V1	-	2088HD
Bacillus cereus	1396	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.92001	35	-	LONG01	185	6398	5948	3/9/16	3/27/17	Contig	Cornell University	SAMN03800023	GCA_001583975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/975/GCA_001583975.1_ASM158397v1	-	FSL M8-0117
Staphylococcus epidermidis	1282	PRJNA319642	319642	Terrabacteria group	Firmicutes	2.66576	31.8	-	LYSI01	83	2719	2561	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04962897	GCA_001659145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/145/GCA_001659145.1_ASM165914v1	-	B12142
Listeria monocytogenes serotype 4bV str. LS542	1391464	PRJNA215248	215248	Terrabacteria group	Firmicutes	2.93073	37.9	-	AVQQ01	45	2956	2896	9/11/13	2/26/17	Contig	US FDA	SAMN02415235	GCA_000465815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/815/GCA_000465815.1_Lmonocytogenes4bV	24136844	LS542
Yersinia pestis CMCC42007	755925	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.44082	47.8	-	ADQV01	1040	4229	3933	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403044	GCA_000324185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/185/GCA_000324185.1_ASM32418v1	23271803	CMCC42007
Campylobacter jejuni subsp. jejuni 04199	1111076	PRJEA76209	76209	Proteobacteria	delta/epsilon subdivisions	1.73222	30.4	-	CAFV01	71	1861	1709	1/10/12	3/15/17	Contig	"Hannover Medical School, Institute for Microbiology"	SAMEA2272411	GCA_000285755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/755/GCA_000285755.1_ASM28575v1	-	4199
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.66157	30.3	chromosome:NZ_CP010467.1/CP010467.1	-	1	1750	1614	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246010	GCA_001507125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/125/GCA_001507125.1_ASM150712v1	-	CJ677CC024
Staphylococcus aureus M0104	1224919	PRJNA173467	173467	Terrabacteria group	Firmicutes	2.93551	33.1	-	ANZJ01	10	3057	2891	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN01125832	GCA_000360165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/165/GCA_000360165.1_Stap_aure_M0104_V1	-	M0104
Staphylococcus aureus M0108	1158510	PRJNA88929	88929	Terrabacteria group	Firmicutes	2.85532	32.9	-	AJCC01	5	2987	2816	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809161	GCA_000360185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/185/GCA_000360185.1_Stap_aure_M0108_V1	-	M0108
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.64516	30.3	chromosome:NZ_CP010468.1/CP010468.1	-	1	1720	1578	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246025	GCA_001507145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/145/GCA_001507145.1_ASM150714v1	-	CJ677CC064
Campylobacter jejuni subsp. jejuni BIGS0004	1248399	PRJNA177352	177352	Proteobacteria	delta/epsilon subdivisions	1.59697	30.7	-	ANGO01	108	1701	1598	11/23/12	3/15/17	Contig	Swansea University	SAMN01795760	GCA_000314085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/085/GCA_000314085.1_ASM31408v1	23279096	BIGS0004
Yersinia pestis CMCC43032	755926	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.51274	47.6	-	ADQW01	1049	4363	4005	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403045	GCA_000324205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/205/GCA_000324205.1_ASM32420v1	23271803	CMCC43032
Listeria monocytogenes QOC2	1288294	PRJEB1354	194517	Terrabacteria group	Firmicutes	2.85744	38	-	CBVW01	4	2900	2784	3/9/14	2/26/17	Contig	VETMEDVIENNA	SAMEA3138995	GCA_000613165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/165/GCA_000613165.1_QOC2_04122011	-	QOC2
Staphylococcus epidermidis	1282	PRJNA319642	319642	Terrabacteria group	Firmicutes	2.62793	31.8	-	LYSJ01	69	2661	2502	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04962913	GCA_001659165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/165/GCA_001659165.1_ASM165916v1	-	B12916
Bacillus cereus	1396	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.48423	35.2	-	LOMR01	130	5855	5553	3/9/16	3/27/17	Contig	Cornell University	SAMN03800025	GCA_001584005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/005/GCA_001584005.1_ASM158400v1	-	FSL W8-0050
Mycobacterium tuberculosis 3499MM	1438874	PRJNA233379	233379	Terrabacteria group	Actinobacteria	4.39738	65.6	-	JKAT01	80	4324	4128	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02567727	GCA_000649515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/515/GCA_000649515.1_Myco_tube_3499MM_V1	-	3499MM
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.64204	30.3	chromosome:NZ_CP010469.1/CP010469.1	-	1	1714	1579	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246040	GCA_001507165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/165/GCA_001507165.1_ASM150716v1	-	CJ677CC525
Streptococcus pneumoniae 2080913	914145	PRJNA59933	59933	Terrabacteria group	Firmicutes	2.06401	39.6	-	ALBL01	21	2280	2039	7/16/12	3/8/17	Contig	"Academic Medical Center Amsterdam, The Netherlands"	SAMN02471533	GCA_000279045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/045/GCA_000279045.1_ASM27904v1	-	2080913
Helicobacter pylori Hp P-1b	992098	PRJNA64223	64223	Proteobacteria	delta/epsilon subdivisions	1.66805	39.1	-	AKQA01	7	1623	1479	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778877	GCA_000274445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/445/GCA_000274445.2_ASM27444v2	-	Hp P-1b
Neisseria meningitidis NM3164	1145190	PRJNA83593	83593	Proteobacteria	Betaproteobacteria	2.23558	51.8	-	APUY01	145	2577	2144	5/1/13	3/21/17	Contig	IGS	SAMN01780146	GCA_000386665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/665/GCA_000386665.2_ASM38666v2	-	NM3164
Streptococcus pyogenes ABC020052218	1439209	PRJNA233184	233184	Terrabacteria group	Firmicutes	1.8258	38.5	-	JJKP01	2	1871	1748	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567533	GCA_000628545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/545/GCA_000628545.1_Stre_pyog_ABC020052218_V1	-	ABC020052218
Leptospira interrogans serovar Copenhageni str. Fiocruz LV3086	996849	PRJNA63797	63797	Spirochaetes	Spirochaetia	4.54863	35	-	AFLB01	316	4046	3722	6/7/11	5/18/17	Scaffold	J. Craig Venter Institute	SAMN00254353	GCA_000216715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/715/GCA_000216715.2_CLC_glsol140	-	Fiocruz LV3086
Pseudomonas aeruginosa BWHPSA045	1402537	PRJNA219898	219898	Proteobacteria	Gammaproteobacteria	7.07909	65.7	-	AZZI01	5	6831	6640	1/14/14	3/9/17	Scaffold	Broad Institute	SAMN02360709	GCA_000520295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/295/GCA_000520295.1_Pseu_aeru_BWHPSA045_V1	-	BWHPSA045
Acinetobacter baumannii AB_TG2028	1221278	PRJNA172690	172690	Proteobacteria	Gammaproteobacteria	3.77074	39	-	AMII01	129	3606	3492	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471284	GCA_000301515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/515/GCA_000301515.1_ASM30151v1	-	AB_TG2028
Streptococcus agalactiae str. Gottschalk 2864	1105239	PRJNA86445	86445	Terrabacteria group	Firmicutes	2.07172	35.3	-	ANFA01	41	2143	2018	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991145	GCA_000310905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/905/GCA_000310905.1_ASM31090v1	-	Gottschalk 2864
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.42334	41.4	-	CEIH01	373	2391	2221	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233983	GCA_000943955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/955/GCA_000943955.1_Velvet_assembly	-	S11J
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.19012	58.5	-	MTHX01	330	5936	5432	4/28/17	6/9/17	Scaffold	Massey University	SAMN06197062	GCA_002175145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/145/GCA_002175145.1_ASM217514v1	28369338	C30
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.62486	38.3	-	FJLT01	31	3348	3206	2/20/16	3/27/17	Contig	SC	SAMEA2080796	GCA_900053745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/745/GCA_900053745.1_10625_3_71	-	2532STDY5467640
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.55632	50.6	-	CXEV01	403	4923	4332	7/16/15	2/24/17	Scaffold	SC	SAMEA954541	GCA_001246385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/385/GCA_001246385.1_5417_3_1	-	20040924_1361417
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.79312	67.1	-	MURV01	146	7541	7001	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001859	GCA_001994665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/665/GCA_001994665.1_ASM199466v1	-	VC7348
Burkholderia pseudomallei	28450	PRJNA272882	272882	Proteobacteria	Betaproteobacteria	7.76799	67.6	-	JYBG01	139	8023	7279	2/24/15	4/10/17	Contig	Menzies School of Health Research	SAMN03287947	GCA_000932075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/932/075/GCA_000932075.1_ASM93207v1	25883282	QCMRI_BP07
Vibrio cholerae O1 str. C6706	1124478	PRJNA73589	73589	Proteobacteria	Gammaproteobacteria	4.0012	47.4	-	AHGQ01	80	3819	3676	12/12/11	3/22/17	Contig	Public Health Agency of Canada	SAMN00765528	GCA_000237785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/785/GCA_000237785.2_ASM23778v2	22099115	C6706
Clostridioides difficile P48	1151423	PRJNA86021	86021	Terrabacteria group	Firmicutes	4.17298	28.4	-	AVMM01	68	3941	3746	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766712	GCA_000451925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/925/GCA_000451925.2_ASM45192v2	-	P48
Vibrio parahaemolyticus S041	1394588	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.0908	45.3	-	AWLU01	710	4898	4621	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338902	GCA_000491355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/355/GCA_000491355.1_S041	-	S041
Klebsiella pneumoniae BIDMC 11	1328405	PRJNA202013	202013	Proteobacteria	Gammaproteobacteria	5.56907	57.3	-	JCNF01	16	5562	5284	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138632	GCA_000567405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/405/GCA_000567405.1_Kleb_pneu_BIDMC_11_V2	-	BIDMC 11
Enterococcus faecalis EnGen0307	1158655	PRJNA89037	89037	Terrabacteria group	Firmicutes	3.18991	37.3	-	AJEB01	19	3315	3144	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809214	GCA_000394835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/835/GCA_000394835.1_Ente_faec_SF370_V1	-	SF370
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14463	52.4	-	CHKC01	81	2503	2186	4/21/15	4/11/17	Contig	SC	SAMEA1690404	GCA_001354915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/915/GCA_001354915.1_8727_8_89	-	GCGS185
Enterococcus faecium EnGen0183	1157478	PRJNA88385	88385	Terrabacteria group	Firmicutes	2.87439	38.1	-	AIUT01	28	2895	2692	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809011	GCA_000395945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/945/GCA_000395945.1_Ente_faec_UAA911_V1	-	UAA911
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12639	41.2	-	CWCC01	72	2060	1878	6/23/15	3/26/17	Contig	SC	SAMEA1033028	GCA_001179305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/305/GCA_001179305.1_6903_5_91	-	EQUI0140
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.65386	30.3	chromosome:CP010478.1	-	1	1751	1610	1/7/16	1/7/16	Complete Genome	University of Helsinki	SAMN03246005	GCA_001506325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/325/GCA_001506325.1_ASM150632v1	-	CJ677CC010
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.14237	60	-	FCIK01	17	4894	4736	1/21/16	3/27/17	Scaffold	SC	SAMEA2273956	GCA_001538825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/825/GCA_001538825.1_12082_2_87	-	2880STDY5682883
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65932	31.4	-	FBMF01	24	1718	1624	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683386	GCA_001487455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/455/GCA_001487455.1_UNOR13691b	-	n/a
Enterobacter cloacae	550	PRJNA393769	393769	Proteobacteria	Gammaproteobacteria	4.68618	55.2	-	NPNO01	39	4590	4364	8/30/17	9/1/17	Scaffold	National University of Singapore and Genome Institute of Singapore	SAMN07448204	GCA_002278245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/245/GCA_002278245.1_ASM227824v1	-	DS15987
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.11592	64.1	-	FSBB01	13	5134	5033	12/14/16	3/21/17	Contig	SC	SAMEA2068799	GCA_900131915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/915/GCA_900131915.1_10665_4_36	-	291
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.46836	67.4	-	LPJP01	105	6801	6498	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449594	GCA_001533145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/145/GCA_001533145.1_ASM153314v1	-	MSMB19WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.91724	55.2	-	LRIR01	53	4839	4619	1/22/16	3/27/17	Contig	JCVI	SAMN04431021	GCA_001525085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/085/GCA_001525085.1_ASM152508v1	-	SMART_1414
Pseudomonas sp. AU12215	1860123	PRJNA325301	325301	Proteobacteria	Gammaproteobacteria	7.3175	64.1	-	MACM02	192	6968	6704	6/22/16	4/13/17	Contig	The University of Michigan	SAMN05226548	GCA_001675465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/465/GCA_001675465.2_ASM167546v2	-	AU12215
Streptomyces sp. MUSC 125	1428624	PRJNA261099	261099	Terrabacteria group	Actinobacteria	7.65646	70	-	JUIG01	164	6840	6372	1/8/15	3/11/17	Contig	University of Malaya	SAMN03070123	GCA_000816485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/485/GCA_000816485.1_ASM81648v1	-	MUSC 125
Bacillus sp. OV194	1881065	PRJEB17218	351392	Terrabacteria group	Firmicutes	4.66287	43	-	FOML01	28	4810	4575	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05428981	GCA_900112635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/635/GCA_900112635.1_IMG-taxon_2684622999_annotated_assembly	-	OV194
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.32958	50	-	FMDV01	57	3093	3040	8/16/16	8/16/16	Scaffold	SC	SAMEA3545293	GCA_900066385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/385/GCA_900066385.1_13414_6_69	-	-
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	6.20706	49.5	-	FMFJ01	17	5588	5527	8/16/16	8/16/16	Scaffold	SC	SAMEA3545303	GCA_900066415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/415/GCA_900066415.1_13470_2_56	-	-
Bacillus sp. 71mf	1761757	PRJEB17372	351539	Terrabacteria group	Firmicutes	5.10893	35.8	-	FOQX01	90	5188	4780	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488574	GCA_900113855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/855/GCA_900113855.1_IMG-taxon_2636416174_annotated_assembly	-	71MF
Streptomyces sp. MNU77	1573406	PRJNA267646	267646	Terrabacteria group	Actinobacteria	8.86835	71.7	-	JXUQ02	4	7673	7360	2/27/15	3/15/17	Contig	Institute of Genomics and Integrative Biology	SAMN03200165	GCA_000935135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/135/GCA_000935135.2_ASM93513v2	-	MNU77
Pseudomonas sp. WCHP16	1876757	PRJNA329578	329578	Proteobacteria	Gammaproteobacteria	5.65015	59.5	-	MBPN01	369	5453	5176	7/27/16	4/13/17	Contig	"West China Hospital, Sichuan University"	SAMN05415086	GCA_001695625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/625/GCA_001695625.1_ASM169562v1	-	WCHP16
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.14308	55.1	-	LRIP01	104	5186	4916	1/22/16	3/27/17	Contig	JCVI	SAMN04431023	GCA_001525095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/095/GCA_001525095.1_ASM152509v1	-	SMART_1488
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.64931	67.1	-	LPKX01	88	6145	5789	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449630	GCA_001533225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/225/GCA_001533225.1_ASM153322v1	-	MSMB705WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.04743	64.2	-	FSBE01	32	5040	4900	12/14/16	3/21/17	Contig	SC	SAMEA2070657	GCA_900131925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/925/GCA_900131925.1_10665_4_38	-	293
Enterobacter cloacae	550	PRJNA393769	393769	Proteobacteria	Gammaproteobacteria	4.75611	54.9	-	NPNP01	52	4608	4390	8/30/17	9/1/17	Scaffold	National University of Singapore and Genome Institute of Singapore	SAMN07448203	GCA_002278265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/265/GCA_002278265.1_ASM227826v1	-	DU20756
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.72048	31.2	-	FBIB01	51	1770	1646	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683275	GCA_001487475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/475/GCA_001487475.1_SWAN407	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.00966	60.2	-	FCLU01	18	4725	4574	1/21/16	3/27/17	Scaffold	SC	SAMEA2274068	GCA_001538845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/845/GCA_001538845.1_12082_3_90	-	2880STDY5682996
Halanaerobium praevalens DSM 2228	572479	PRJNA32591	32591	Terrabacteria group	Firmicutes	2.30926	30.3	chromosome:NC_017455.1/CP002175.1	-	1	2164	2071	10/21/10	4/17/17	Complete Genome	DOE Joint Genome Institute	SAMN00103629	GCA_000165465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/165/465/GCA_000165465.1_ASM16546v1	21886858	DSM 2228
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15339	41.1	-	CWFS01	86	2113	1924	6/24/15	3/26/17	Contig	SC	SAMEA1033030	GCA_001179325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/325/GCA_001179325.1_6817_1_66	-	EQUI0019
Enterococcus faecium EnGen0184	1157479	PRJNA88387	88387	Terrabacteria group	Firmicutes	2.76886	38.5	-	AITN01	27	2796	2496	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808870	GCA_000395965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/965/GCA_000395965.1_Ente_faec_F9730129-1_V1	-	F9730129-1
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14686	52.4	-	CHKF01	70	2505	2184	4/21/15	4/11/17	Contig	SC	SAMEA1690406	GCA_001354935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/935/GCA_001354935.1_8289_2_68	-	GCGS068
Enterococcus faecalis EnGen0280	1158656	PRJNA89039	89039	Terrabacteria group	Firmicutes	3.24669	37.3	-	AJEC01	16	3385	3223	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809215	GCA_000394855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/855/GCA_000394855.1_Ente_faec_CH570_V1	-	CH570
Klebsiella pneumoniae BIDMC 7B	1328403	PRJNA202009	202009	Proteobacteria	Gammaproteobacteria	5.71755	57	-	JCNG01	9	5800	5535	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138628	GCA_000567425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/425/GCA_000567425.1_Kleb_pneu_BIDMC_7B_V2	-	BIDMC 7B
Vibrio parahaemolyticus S040	1394587	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	4.9866	45.3	-	AWLV01	517	4772	4536	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338901	GCA_000491375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/375/GCA_000491375.1_S040	-	S040
Clostridioides difficile P49	1151424	PRJNA86023	86023	Terrabacteria group	Firmicutes	4.15389	28.4	-	AVMN01	46	3829	3676	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766714	GCA_000451945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/945/GCA_000451945.2_ASM45194v2	-	P49
Vibrio cholerae 2011EL-301	1147127	PRJNA83021	83021	Proteobacteria	Gammaproteobacteria	4.00287	47.5	-	AJFN02	163	3757	3632	4/2/12	3/23/17	Contig	Central Research Institute for Epidemiology	SAMN02469782	GCA_000257415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/415/GCA_000257415.2_ASM25741v2	23969060	2011EL-301
Burkholderia pseudomallei	28450	PRJNA272882	272882	Proteobacteria	Betaproteobacteria	7.3562	68	-	JYBH01	98	7603	6949	2/24/15	3/25/17	Contig	Menzies School of Health Research	SAMN03287948	GCA_000932085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/932/085/GCA_000932085.1_ASM93208v1	25883282	QCMRI_BP13
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.28878	67.1	-	MUSN01	96	7816	7322	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001879	GCA_001994695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/695/GCA_001994695.1_ASM199469v1	-	VC13395
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.69008	50.7	-	CWYE01	383	5133	4509	7/16/15	2/24/17	Scaffold	SC	SAMEA2445705	GCA_001246455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/455/GCA_001246455.1_12971_8_24	-	H092680333
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.36265	38.3	-	FJEV01	30	3090	2956	2/20/16	3/27/17	Contig	SC	SAMEA2065279	GCA_900054155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/155/GCA_900054155.1_10771_3_92	-	2531STDY5467469
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.17161	58.5	-	MTHW01	321	5937	5428	4/28/17	6/9/17	Scaffold	Massey University	SAMN06197061	GCA_002175175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/175/GCA_002175175.1_ASM217517v1	28369338	C29
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.06676	41.1	-	CEIC01	176	2099	1938	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234016	GCA_000944115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/115/GCA_000944115.1_Velvet_assembly	-	type strain: S15
Streptococcus agalactiae MRI Z1-048	1154871	PRJNA86401	86401	Terrabacteria group	Firmicutes	2.02393	35.3	-	ANEQ01	135	2165	1990	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993337	GCA_000310925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/925/GCA_000310925.1_ASM31092v1	-	MRI Z1-048
Acinetobacter baumannii AB_TG2030	1221279	PRJNA172691	172691	Proteobacteria	Gammaproteobacteria	3.76439	39.1	-	AMIJ01	151	3598	3477	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471240	GCA_000301535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/535/GCA_000301535.1_ASM30153v1	-	AB_TG2030
Pseudomonas aeruginosa BWHPSA044	1402536	PRJNA219897	219897	Proteobacteria	Gammaproteobacteria	6.90167	66	-	AZZJ01	4	6592	6420	1/14/14	3/9/17	Scaffold	Broad Institute	SAMN02360708	GCA_000520315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/315/GCA_000520315.1_Pseu_aeru_BWHPSA044_V1	-	BWHPSA044
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2973	996848	PRJNA63795	63795	Spirochaetes	Spirochaetia	4.54907	35	-	AFLA01	281	4050	3735	6/7/11	5/18/17	Scaffold	J. Craig Venter Institute	SAMN00254354	GCA_000216735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/735/GCA_000216735.2_CLC_glsol137	-	Fiocruz LV2973
Streptococcus pyogenes ABC020052375	1439213	PRJNA233185	233185	Terrabacteria group	Firmicutes	1.83252	38.5	-	JJKQ01	2	1882	1760	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567534	GCA_000628565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/565/GCA_000628565.1_Stre_pyog_ABC020052375_V1	-	ABC020052375
Neisseria meningitidis NM51	1145192	PRJNA83597	83597	Proteobacteria	Betaproteobacteria	2.11328	51.9	-	APVA01	134	2433	2064	5/1/13	3/21/17	Contig	IGS	SAMN01780168	GCA_000386685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/685/GCA_000386685.2_ASM38668v2	-	NM51
Helicobacter pylori Hp P-25c	992111	PRJNA64249	64249	Proteobacteria	delta/epsilon subdivisions	1.66911	39.2	-	AKQK01	6	1654	1496	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778886	GCA_000274465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/465/GCA_000274465.1_ASM27446v1	-	Hp P-25c
Streptococcus pneumoniae 2081685	914138	PRJNA59919	59919	Terrabacteria group	Firmicutes	1.98106	39.7	-	ALBN01	13	2188	1934	7/16/12	3/9/17	Contig	"Academic Medical Center Amsterdam, The Netherlands"	SAMN02471526	GCA_000279085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/085/GCA_000279085.1_ASM27908v1	-	2081685
Campylobacter jejuni RM1221	195099	PRJNA303	303	Proteobacteria	delta/epsilon subdivisions	1.77783	30.3	chromosome:NC_003912.7/CP000025.1	-	1	1903	1774	5/16/02	3/15/17	Complete Genome	TIGR	SAMN02604007	GCA_000011865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/865/GCA_000011865.1_ASM1186v1	15660156	RM1221
Mycobacterium tuberculosis 1755BN	1438842	PRJNA233380	233380	Terrabacteria group	Actinobacteria	4.3945	65.6	-	JKAS01	92	4322	4116	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02567728	GCA_000649535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/535/GCA_000649535.1_Myco_tube_1755BN_V1	-	1755BN
Bacillus cereus	1396	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.95814	34.8	-	LOAZ01	139	6249	5862	3/9/16	3/27/17	Contig	Cornell University	SAMN03800015	GCA_001584025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/025/GCA_001584025.1_ASM158402v1	-	FSL H8-0482
Staphylococcus epidermidis	1282	PRJNA319642	319642	Terrabacteria group	Firmicutes	2.60403	31.9	-	LYSK01	89	2641	2476	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04963291	GCA_001659185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/185/GCA_001659185.1_ASM165918v1	-	B13258
Listeria monocytogenes N53-1	1234142	PRJNA222722	222722	Terrabacteria group	Firmicutes	3.09784	37.8	-	AXDU01	35	3169	3106	4/10/14	2/26/17	Contig	Technical University of Denmark	SAMN02742055	GCA_000626575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/575/GCA_000626575.1_L._monocytogenes_N53-1_Illumina_	24637686	N53-1
Yersinia pestis CMCC49003	755929	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.53456	47.6	-	ADQX01	795	4284	4049	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403046	GCA_000324225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/225/GCA_000324225.1_ASM32422v1	23271803	CMCC49003
Campylobacter jejuni subsp. jejuni BIGS0013	1248400	PRJNA177352	177352	Proteobacteria	delta/epsilon subdivisions	1.55135	30.6	-	ANGX01	86	1680	1531	11/23/12	3/15/17	Contig	Swansea University	SAMN01795769	GCA_000314265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/265/GCA_000314265.1_ASM31426v1	23279096	BIGS0013
Deferribacter desulfuricans SSM1	639282	PRJDA37285	37285	Deferribacteres	Deferribacteres	2.54293	30.2992	chromosome:NC_013939.1/AP011529.1; plasmid megaplasmid pDF308:NC_013940.1/AP011530.1	-	2	2501	2432	3/6/10	4/17/17	Complete Genome	Japan Agency for Marine-Earth Science and Technology	SAMD00060965	GCA_000010985.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/985/GCA_000010985.1_ASM1098v1	"1,280,721,020,189,940"	SSM1
Staphylococcus aureus M0144	1158511	PRJNA88931	88931	Terrabacteria group	Firmicutes	2.92773	33.1	-	AJCD01	5	3052	2888	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809162	GCA_000360205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/205/GCA_000360205.1_Stap_aure_M0144_V1	-	M0144
Staphylococcus aureus M0150	1157012	PRJNA88581	88581	Terrabacteria group	Firmicutes	2.98385	33.2	-	AIVY01	7	3113	2936	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792136	GCA_000360225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/225/GCA_000360225.1_Stap_aure_M0150_V1	-	M0150
Campylobacter jejuni	197	PRJNA310765	310765	Proteobacteria	delta/epsilon subdivisions	1.73226	30.2894	chromosome:NZ_CP014344.1/CP014344.1; plasmid unnamed:NZ_CP014345.1/CP014345.1	-	2	1791	1655	2/18/16	3/19/17	Complete Genome	U.S. Department of Agriculture	SAMN04455262	GCA_001563565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/565/GCA_001563565.1_ASM156356v1	27125483	RM3194
Campylobacter jejuni subsp. jejuni BIGS0014	1248401	PRJNA177352	177352	Proteobacteria	delta/epsilon subdivisions	1.54388	30.9	-	ANGY01	324	1689	1469	11/23/12	3/15/17	Contig	Swansea University	SAMN01795898	GCA_000314285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/285/GCA_000314285.1_ASM31428v1	23279096	BIGS0014
Yersinia pestis CMCC51020	755930	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.42099	47.9	-	ADQY01	1118	4165	3895	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403047	GCA_000324245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/245/GCA_000324245.1_ASM32424v1	23271803	CMCC51020
Listeria monocytogenes QOC1	1288293	PRJEB1353	194516	Terrabacteria group	Firmicutes	2.93146	38	-	CBVZ01	7	2965	2836	3/9/14	2/26/17	Contig	VETMEDVIENNA	SAMEA3139005	GCA_000689335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/335/GCA_000689335.1_QOC1_04122011	-	QOC1
Staphylococcus epidermidis	1282	PRJNA319642	319642	Terrabacteria group	Firmicutes	2.63472	31.8	-	LYSM01	76	2679	2516	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04963294	GCA_001659205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/205/GCA_001659205.1_ASM165920v1	-	B13587
Bacillus cereus	1396	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.35367	35.4	-	LOBD01	110	5545	5315	3/9/16	3/27/17	Contig	Cornell University	SAMN03800014	GCA_001584065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/065/GCA_001584065.1_ASM158406v1	-	FSL H7-0926
Mycobacterium tuberculosis 1430BH	1438838	PRJNA233381	233381	Terrabacteria group	Actinobacteria	4.41907	65.6	-	JKAR01	92	4345	4132	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02567729	GCA_000649555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/555/GCA_000649555.1_Myco_tube_1430BH_V1	-	1430BH
Campylobacter jejuni	197	PRJNA314911	314911	Proteobacteria	delta/epsilon subdivisions	1.80145	30.281	chromosome:NZ_CP014742.1/CP014742.1; plasmid pCJDM202:NZ_CP014743.1/CP014743.1	-	2	1901	1775	3/11/16	3/19/17	Complete Genome	University of Tulsa	SAMN04545451	GCA_001587035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/035/GCA_001587035.1_ASM158703v1	-	WP2202
Streptococcus pneumoniae 2082239	914147	PRJNA59937	59937	Terrabacteria group	Firmicutes	2.04803	39.6	-	ALBP01	24	2267	1994	7/16/12	3/9/17	Contig	"Academic Medical Center Amsterdam, The Netherlands"	SAMN02471535	GCA_000279125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/125/GCA_000279125.1_ASM27912v1	-	2082239
Helicobacter pylori Hp H-11	992064	PRJNA64155	64155	Proteobacteria	delta/epsilon subdivisions	1.65767	38.9	-	AKPC01	9	1658	1480	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778851	GCA_000274485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/485/GCA_000274485.2_ASM27448v2	23661595	Hp H-11
Neisseria meningitidis NM43	1145150	PRJNA83513	83513	Proteobacteria	Betaproteobacteria	2.12367	51.9	-	APTK01	132	2453	2090	5/1/13	3/21/17	Contig	IGS	SAMN01780100	GCA_000386705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/705/GCA_000386705.2_ASM38670v2	-	NM43
Streptococcus pyogenes ABC020052553	1439219	PRJNA233187	233187	Terrabacteria group	Firmicutes	1.82996	38.5	-	JJKR01	2	1878	1755	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567536	GCA_000628585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/585/GCA_000628585.1_Stre_pyog_ABC020052553_V1	-	ABC020052553
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2959	996847	PRJNA63793	63793	Spirochaetes	Spirochaetia	4.55177	35	-	AFKZ01	303	4049	3723	6/7/11	5/18/17	Scaffold	J. Craig Venter Institute	SAMN00254352	GCA_000216755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/755/GCA_000216755.2_CLC_glsol136	-	Fiocruz LV2959
Pseudomonas aeruginosa BWHPSA043	1402535	PRJNA219896	219896	Proteobacteria	Gammaproteobacteria	6.87981	66	-	AZZK01	27	6573	6326	1/14/14	3/9/17	Scaffold	Broad Institute	SAMN02360707	GCA_000520335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/335/GCA_000520335.1_Pseu_aeru_BWHPSA043_V1	-	BWHPSA043
Acinetobacter baumannii AB_TG2031	1221280	PRJNA172692	172692	Proteobacteria	Gammaproteobacteria	3.78279	39	-	AMIK01	75	3601	3493	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471264	GCA_000301555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/555/GCA_000301555.1_ASM30155v1	-	AB_TG2031
Streptococcus agalactiae MRI Z1-025	1154867	PRJNA86393	86393	Terrabacteria group	Firmicutes	2.11678	35.4	-	ANEO01	26	2181	2064	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993338	GCA_000310945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/945/GCA_000310945.1_ASM31094v1	-	MRI Z1-025
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.21894	41.2	-	CEJK01	144	2184	2061	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233947	GCA_000944175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/175/GCA_000944175.1_Velvet_assembly	-	LS8B
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.16856	58.5	-	MTHY01	300	5923	5432	4/28/17	6/9/17	Scaffold	Massey University	SAMN06197063	GCA_002175185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/185/GCA_002175185.1_ASM217518v1	28369338	C31
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54224	38.3	-	FJHY01	61	3239	3088	2/20/16	3/27/17	Contig	SC	SAMEA2077983	GCA_900054165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/165/GCA_900054165.1_10625_3_57	-	2532STDY5467626
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.24168	50.9	-	CXDE01	372	4538	4069	7/16/15	2/24/17	Scaffold	SC	SAMEA954801	GCA_001246585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/585/GCA_001246585.1_5236_7_10	-	Sh8883_441047
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.79141	67.2	-	MUTM01	120	7319	6973	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001913	GCA_001994715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/715/GCA_001994715.1_ASM199471v1	-	VC12746
Burkholderia pseudomallei	28450	PRJNA272882	272882	Proteobacteria	Betaproteobacteria	7.56581	67.7	-	JYBJ01	161	7802	7103	2/24/15	4/10/17	Contig	Menzies School of Health Research	SAMN03287950	GCA_000932095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/932/095/GCA_000932095.1_ASM93209v1	25883282	QCMRI_BP28
Vibrio cholerae CP1041(14)	991926	PRJNA63859	63859	Proteobacteria	Gammaproteobacteria	4.08555	47.4	-	ALDE01	23	3910	3717	7/18/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00622027	GCA_000279245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/245/GCA_000279245.1_ASM27924v1	-	CP1041(14)
Clostridioides difficile P50	1151425	PRJNA86025	86025	Terrabacteria group	Firmicutes	4.39565	28.6	-	AVMO01	29	4214	4017	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01978919	GCA_000451965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/965/GCA_000451965.2_ASM45196v2	-	P50
Vibrio parahaemolyticus S039	1394586	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.02552	45.2	-	AWLW01	795	4916	4460	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338900	GCA_000491395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/395/GCA_000491395.1_S039	-	S039
Klebsiella pneumoniae BIDMC 5	1328401	PRJNA202006	202006	Proteobacteria	Gammaproteobacteria	5.79855	57	-	JCNH01	8	5910	5631	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138625	GCA_000567445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/445/GCA_000567445.1_Kleb_pneu_BIDMC_5_V2	-	BIDMC 5
Enterococcus faecalis EnGen0303	1158657	PRJNA89041	89041	Terrabacteria group	Firmicutes	3.16163	37.3	-	AJED01	18	3238	3062	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809216	GCA_000394875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/875/GCA_000394875.1_Ente_faec_Ned10_V1	-	Ned10
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.1473	52.4	-	CFSE01	75	2509	2198	3/15/15	4/11/17	Contig	SC	SAMEA1690414	GCA_001354955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/955/GCA_001354955.1_8289_2_88	-	GCGS088
Enterococcus faecium EnGen0185	1157480	PRJNA88459	88459	Terrabacteria group	Firmicutes	2.80424	38.2	-	AITR01	19	2906	2645	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808909	GCA_000396685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/685/GCA_000396685.1_Ente_faec_HF50104_V1	-	HF50104
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12733	41.2	-	CVZM01	76	2058	1874	6/24/15	3/26/17	Contig	SC	SAMEA1033031	GCA_001179345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/345/GCA_001179345.1_6903_2_17	-	EQUI0067
Campylobacter jejuni subsp. jejuni M129	1349827	PRJNA209349	209349	Proteobacteria	delta/epsilon subdivisions	1.80131	30.2691	chromosome:NZ_CP007749.1/CP007749.1; plasmid pTet-M129:NZ_CP007750.1/CP007750.1	-	2	1893	1763	11/3/16	3/20/17	Complete Genome	University of Arizona	SAMN02990965	GCA_001865595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/595/GCA_001865595.1_ASM186559v1	-	M129
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.00992	60.1	-	FCLQ01	17	4751	4596	1/21/16	3/27/17	Scaffold	SC	SAMEA2274065	GCA_001538865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/865/GCA_001538865.1_12082_3_87	-	2880STDY5682993
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66131	31.3	-	FBNL01	37	1701	1608	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683426	GCA_001487495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/495/GCA_001487495.1_H092660305	-	n/a
Enterobacter cloacae	550	PRJNA393769	393769	Proteobacteria	Gammaproteobacteria	5.02273	54.5	-	NPNQ01	47	4876	4663	8/30/17	9/1/17	Scaffold	National University of Singapore and Genome Institute of Singapore	SAMN07448202	GCA_002278295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/295/GCA_002278295.1_ASM227829v1	-	DS11861
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.85843	64.2	-	FVDY01	17	4838	4693	3/10/17	3/18/17	Contig	SC	SAMEA2068800	GCA_900131935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/935/GCA_900131935.1_10665_4_39	-	294
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.52883	67.3	-	LPKV01	114	6776	6441	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449628	GCA_001533265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/265/GCA_001533265.1_ASM153326v1	-	MSMB696WGS
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.01586	55.1	-	LRIZ01	82	5002	4751	1/22/16	3/27/17	Contig	JCVI	SAMN04431013	GCA_001525125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/125/GCA_001525125.1_ASM152512v1	-	EC_849
Pseudomonas sp. S1E40	1869229	PRJNA327239	327239	Proteobacteria	Gammaproteobacteria	6.98407	61.6	-	MAUE01	49	6373	6187	8/10/16	4/13/17	Contig	Eastern Cereal and Oilseed Research Centre	SAMN05325920	GCA_001702265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/702/265/GCA_001702265.1_ASM170226v1	-	S1E40
Streptomyces sp. NRRL F-4428	1609137	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.08144	72.5	-	JYJI01	437	6467	6111	3/18/15	3/11/17	Contig	University of Illinois	SAMN03323306	GCA_000956015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/015/GCA_000956015.1_ASM95601v1	-	NRRL F-4428
Bacillus sp. 5mfcol3.1	1761756	PRJEB17427	351643	Terrabacteria group	Firmicutes	5.82692	34.8	-	FOST01	69	6089	5710	10/31/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488573	GCA_900114335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/335/GCA_900114335.1_IMG-taxon_2636416171_annotated_assembly	-	5MFCol3.1
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.72558	29.2	-	FMEW01	33	2769	2711	8/16/16	8/16/16	Scaffold	SC	SAMEA3545318	GCA_900066475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/475/GCA_900066475.1_13470_2_71	-	-
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.39079	27.6	-	FMFC01	38	3396	3347	8/16/16	8/16/16	Scaffold	SC	SAMEA3545325	GCA_900066495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/495/GCA_900066495.1_13470_2_78	-	-
Bacillus sp. ok634	1761767	PRJEB17448	351623	Terrabacteria group	Firmicutes	5.83413	35.2	-	FOYB01	74	6280	5784	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487920	GCA_900115885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/885/GCA_900115885.1_IMG-taxon_2615840538_annotated_assembly	-	OK634
Streptomyces sp. NRRL S-495	1609133	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.0638	73.5	-	JZWY01	1416	7999	6912	3/31/15	3/11/17	Contig	University of Illinois	SAMN03323301	GCA_000966955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/955/GCA_000966955.1_ASM96695v1	-	NRRL S-495
Pseudomonas sp. S3E12	1873126	PRJNA327239	327239	Proteobacteria	Gammaproteobacteria	7.06266	60.9	-	MBDT01	38	6465	6184	8/10/16	4/13/17	Contig	Eastern Cereal and Oilseed Research Centre	SAMN05332126	GCA_001702295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/702/295/GCA_001702295.1_ASM170229v1	-	S3E12
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.05589	54.8	-	LRJB01	85	4985	4751	1/22/16	3/27/17	Contig	JCVI	SAMN04431011	GCA_001525155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/155/GCA_001525155.1_ASM152515v1	-	SMART_1270
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.4054	67.3	-	LPIB01	111	6698	6334	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449553	GCA_001533285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/285/GCA_001533285.1_ASM153328v1	-	MSMB2124WGS
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.85503	64.2	-	FVDX01	8	4850	4733	3/10/17	3/18/17	Contig	SC	SAMEA2070656	GCA_900131945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/945/GCA_900131945.1_10665_4_35	-	290
Enterobacter cloacae	550	PRJNA393769	393769	Proteobacteria	Gammaproteobacteria	4.71583	55.3	-	NPNR01	29	4649	4449	8/30/17	9/1/17	Scaffold	National University of Singapore and Genome Institute of Singapore	SAMN07448201	GCA_002278305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/305/GCA_002278305.1_ASM227830v1	-	DS11005
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.77143	31.2	-	FBQN01	64	1805	1682	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683497	GCA_001487515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/515/GCA_001487515.1_H081380701	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.31341	59.9	-	FCJN01	25	5052	4892	1/21/16	3/27/17	Scaffold	SC	SAMEA2274003	GCA_001538885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/885/GCA_001538885.1_12082_3_32	-	2880STDY5682931
Campylobacter jejuni	197	PRJNA350584	350584	Proteobacteria	delta/epsilon subdivisions	1.80567	30.269	chromosome:NZ_CP017860.1/CP017860.1; plasmid pCJDM218:NZ_CP017861.1/CP017861.1	-	2	1892	1734	11/3/16	3/20/17	Complete Genome	University of Tulsa	SAMN05942187	GCA_001865415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/415/GCA_001865415.1_ASM186541v1	-	TS1218
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15091	41.2	-	CWDT01	86	2098	1907	6/24/15	3/26/17	Contig	SC	SAMEA1033032	GCA_001179365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/365/GCA_001179365.1_6903_7_31	-	EQUI0176
Enterococcus faecium EnGen0186	1157481	PRJNA88461	88461	Terrabacteria group	Firmicutes	2.63895	38.3	-	AITS01	15	2684	2437	5/3/13	3/24/17	Scaffold	Broad Institute	SAMN00808910	GCA_000396705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/705/GCA_000396705.1_Ente_faec_HF50105_V1	-	HF50105
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14459	52.4	-	CFOB01	73	2511	2177	3/15/15	4/11/17	Contig	SC	SAMEA1690423	GCA_001354995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/995/GCA_001354995.1_8289_2_28	-	GCGS028
Enterococcus faecalis EnGen0298	1158658	PRJNA89043	89043	Terrabacteria group	Firmicutes	3.2621	37.1	-	AJEE01	35	3385	3209	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809217	GCA_000394895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/895/GCA_000394895.1_Ente_faec_SF105_V1	-	SF105
Klebsiella pneumoniae BIDMC 4	1328400	PRJNA202005	202005	Proteobacteria	Gammaproteobacteria	5.55834	57.1	-	JCNI01	14	5611	5375	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138624	GCA_000567465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/465/GCA_000567465.1_Kleb_pneu_BIDMC_4_V2	-	BIDMC 4
Vibrio parahaemolyticus S038	1394585	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.11515	45.2	-	AWLX01	840	4933	4617	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338899	GCA_000491415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/415/GCA_000491415.1_S038	-	S038
Clostridioides difficile P51	1151426	PRJNA86027	86027	Terrabacteria group	Firmicutes	4.25678	28.9	-	AVMP01	56	4026	3842	8/20/13	3/15/17	Contig	Institute for Genome Sciences	SAMN01766716	GCA_000451985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/985/GCA_000451985.1_ASM45198v1	-	P51
Vibrio cholerae HE-25	991944	PRJNA63895	63895	Proteobacteria	Gammaproteobacteria	4.09253	47.6	-	ALEC01	13	3937	3698	7/18/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00265075	GCA_000279265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/265/GCA_000279265.1_ASM27926v1	-	HE-25
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.05119	68.3	-	CUWD01	232	7288	6751	3/31/15	3/26/17	Contig	SC	SAMEA949346	GCA_001233045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/045/GCA_001233045.1_7915_5_20	-	23/96
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.80529	67.2	-	MUTO01	85	7309	7003	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001915	GCA_001994735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/735/GCA_001994735.1_ASM199473v1	-	VC12820
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.69095	50.7	-	CXGB01	381	5129	4530	7/16/15	2/24/17	Scaffold	SC	SAMEA1013822	GCA_001246675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/675/GCA_001246675.1_6551_1_10	-	SS129764_2798532
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.54115	38.3	-	FJAT01	62	3233	3087	2/20/16	3/27/17	Contig	SC	SAMEA2058282	GCA_900054385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/385/GCA_900054385.1_10771_1_31	-	2531STDY5467312
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.09168	58.6	-	MTHZ01	345	5848	5296	4/28/17	6/9/17	Scaffold	Massey University	SAMN06197064	GCA_002175215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/215/GCA_002175215.1_ASM217521v1	28369338	C48
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04207	41.2	-	CEKB01	60	2026	1919	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234080	GCA_000944195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/195/GCA_000944195.1_Velvet_assembly	-	S92S
Streptococcus agalactiae str. Gottschalk 998A	1105241	PRJNA86451	86451	Terrabacteria group	Firmicutes	2.11441	35.2	-	ANFC01	41	2193	2085	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991140	GCA_000310965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/965/GCA_000310965.1_ASM31096v1	-	Gottschalk 998A
Acinetobacter baumannii AB_TG2631	1221282	PRJNA172694	172694	Proteobacteria	Gammaproteobacteria	3.8813	38.9	-	AMIM01	95	3730	3611	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471230	GCA_000301575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/575/GCA_000301575.1_ASM30157v1	-	AB_TG2631
Pseudomonas aeruginosa BWHPSA042	1402534	PRJNA219895	219895	Proteobacteria	Gammaproteobacteria	5.89339	66.5	-	AZZL01	3	5596	5421	1/14/14	3/9/17	Scaffold	Broad Institute	SAMN02360706	GCA_000520355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/355/GCA_000520355.1_Pseu_aeru_BWHPSA042_V1	-	BWHPSA042
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2958	996846	PRJNA63791	63791	Spirochaetes	Spirochaetia	4.53606	35	-	AFKY01	297	4042	3722	6/7/11	5/18/17	Scaffold	J. Craig Venter Institute	SAMN00254351	GCA_000216775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/775/GCA_000216775.2_CLC_glsol135	-	Fiocruz LV2958
Streptococcus pyogenes ABC020052877	1439221	PRJNA233188	233188	Terrabacteria group	Firmicutes	1.83505	38.4	-	JJKS01	6	1899	1785	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567537	GCA_000628605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/605/GCA_000628605.1_Stre_pyog_ABC020052877_V1	-	ABC020052877
Neisseria meningitidis NM1495	1145156	PRJNA83525	83525	Proteobacteria	Betaproteobacteria	2.13443	51.9	-	APTQ01	136	2471	2109	5/1/13	3/21/17	Contig	IGS	SAMN01780106	GCA_000386725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/725/GCA_000386725.2_ASM38672v2	-	NM1495
Helicobacter pylori Hp H-18	992065	PRJNA64157	64157	Proteobacteria	delta/epsilon subdivisions	1.76069	39	-	AKPD01	21	1749	1554	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778853	GCA_000274505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/505/GCA_000274505.1_ASM27450v1	-	Hp H-18
Streptococcus pneumoniae GA52612	760858	PRJNA48907	48907	Terrabacteria group	Firmicutes	2.09048	39.6	-	ALCG01	10	2278	2016	7/18/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00718783	GCA_000279225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/225/GCA_000279225.1_ASM27922v1	-	GA52612
Borrelia hermsii HS1	1867252	PRJNA311246	311246	Spirochaetes	Spirochaetia	1.39001	30.248	chromosome:NZ_CP014349.1/CP014349.1; plasmid cp28:NZ_CP014351.1/CP014351.1; plasmid cp6.5:NZ_CP015335.1/CP015335.1; plasmid lpB58:NZ_CP014792.1/CP014792.1; plasmid lpE27:NZ_CP014871.1/CP014871.1; plasmid lpF27:NZ_CP015336.1/CP015336.1; plasmid lpG27:NZ_CP015334.1/CP015334.1; plasmid lpN31:NZ_CP015331.1/CP015331.1; plasmid lpT28:NZ_CP015332.1/CP015332.1; plasmid lpV47:NZ_CP015333.1/CP015333.1; plasmid megaplasmid:NZ_CP014350.1/CP014350.1	-	12	1336	1234	4/22/16	4/10/17	Complete Genome	University of California Irvine	SAMN04481062	GCA_001660005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/005/GCA_001660005.1_ASM166000v1	27284141	HS1
Mycobacterium tuberculosis 1429BH	1438837	PRJNA233382	233382	Terrabacteria group	Actinobacteria	4.41768	65.6	-	JKAQ01	88	4347	4128	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02567730	GCA_000649575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/575/GCA_000649575.1_Myco_tube_1429BH_V1	-	1429BH
Bacillus cereus	1396	PRJNA288461	288461	Terrabacteria group	Firmicutes	6.06261	34.7	-	LOBE01	216	5912	5691	3/9/16	3/14/16	Contig	Cornell University	SAMN03800017	GCA_001584085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/085/GCA_001584085.1_ASM158408v1	-	FSL K6-0040
Staphylococcus epidermidis	1282	PRJNA319642	319642	Terrabacteria group	Firmicutes	2.41799	32.1	-	LYVS01	94	2398	2234	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN05187218	GCA_001659225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/225/GCA_001659225.1_ASM165922v1	-	ENVL300
Listeria monocytogenes 4423	1288296	PRJEB1356	194519	Terrabacteria group	Firmicutes	3.06306	37.8	-	CBXR01	12	3151	3047	5/8/14	2/26/17	Contig	VETMEDVIENNA	SAMEA3139012	GCA_000689475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/475/GCA_000689475.1_4423_04122011	-	4423
Yersinia pestis CMCC64001	755932	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.36049	47.7	-	ADQZ01	955	4144	3892	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403048	GCA_000324265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/265/GCA_000324265.1_ASM32426v1	23271803	CMCC64001
Campylobacter jejuni subsp. jejuni BIGS0022	1248402	PRJNA177352	177352	Proteobacteria	delta/epsilon subdivisions	1.57374	30.8	-	ANHG01	169	1722	1556	11/23/12	3/15/17	Contig	Swansea University	SAMN01795906	GCA_000314445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/445/GCA_000314445.1_ASM31444v1	23279096	BIGS0022
Campylobacter jejuni subsp. jejuni	32022	PRJNA231221	231221	Proteobacteria	delta/epsilon subdivisions	1.76843	30.2	chromosome:NZ_CP022076.1/CP022076.1	-	1	1841	1661	6/27/17	6/29/17	Complete Genome	US Food and Drug Administration 	SAMN04875588	GCA_002209005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/005/GCA_002209005.1_ASM220900v1	-	FDAARGOS_262
Staphylococcus aureus M0154	1158512	PRJNA88933	88933	Terrabacteria group	Firmicutes	2.85808	32.9	-	AJCE01	11	3003	2840	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809163	GCA_000360245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/245/GCA_000360245.1_Stap_aure_M0154_V1	-	M0154
Staphylococcus aureus M0171	1224920	PRJNA173468	173468	Terrabacteria group	Firmicutes	2.9418	33.1	-	ANZK01	9	3076	2901	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN01125833	GCA_000360265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/265/GCA_000360265.1_Stap_aure_M0171_V1	-	M0171
Campylobacter jejuni	197	PRJNA268846	268846	Proteobacteria	delta/epsilon subdivisions	1.67976	30.2	chromosome:NZ_CP010501.1/CP010501.1	-	1	1775	1639	1/7/16	3/19/17	Complete Genome	University of Helsinki	SAMN03246035	GCA_001506705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/705/GCA_001506705.1_ASM150670v1	-	CJ677CC520
Campylobacter jejuni subsp. jejuni BIGS0030	1248404	PRJNA177352	177352	Proteobacteria	delta/epsilon subdivisions	1.60736	30.4	-	ANHK01	422	1797	1508	11/23/12	3/15/17	Contig	Swansea University	SAMN01795910	GCA_000314525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/525/GCA_000314525.1_ASM31452v1	23279096	BIGS0030
Yersinia pestis CMCC640047	755933	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.30575	48.2	-	ADRA01	1490	4135	3736	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403049	GCA_000324285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/285/GCA_000324285.1_ASM32428v1	23271803	CMCC640047
Listeria monocytogenes	1639	PRJNA242767	242767	Terrabacteria group	Firmicutes	3.00854	37.8	-	JMMW01	42	3074	2981	6/16/14	2/26/17	Contig	Health Canada	SAMN02743864	GCA_000708245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/245/GCA_000708245.1_LI0521	25059873	LI0521
Staphylococcus epidermidis	1282	PRJNA319642	319642	Terrabacteria group	Firmicutes	2.71873	31.8	-	LYVR01	80	2782	2616	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN05185270	GCA_001659235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/235/GCA_001659235.1_ASM165923v1	-	ENVH131
Bacillus cereus	1396	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.39505	35.3	-	LONH01	325	5775	5427	3/9/16	3/27/17	Contig	Cornell University	SAMN03800030	GCA_001584095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/095/GCA_001584095.1_ASM158409v1	-	FSL W8-0520
Mycobacterium tuberculosis 1173CS	1438835	PRJNA233383	233383	Terrabacteria group	Actinobacteria	4.38558	65.6	-	JKAP01	86	4306	4101	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02567731	GCA_000649595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/595/GCA_000649595.1_Myco_tube_1173CS_V1	-	1173CS
Campylobacter jejuni	197	PRJEB6403	251923	Proteobacteria	delta/epsilon subdivisions	1.76644	30.2	chromosome 1:NZ_LN831025.1/LN831025.1	-	1	1836	1669	3/22/15	3/19/17	Complete Genome	SC	SAMEA2479571	GCA_001457695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/695/GCA_001457695.1_NCTC11351	-	NCTC11351
Streptococcus pneumoniae GA04216	1069624	PRJNA70981	70981	Terrabacteria group	Firmicutes	2.05757	39.8	-	ALCK01	10	2247	1962	7/18/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00773087	GCA_000279475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/475/GCA_000279475.1_ASM27947v1	-	GA04216
Helicobacter pylori NQ4161	992030	PRJNA64087	64087	Proteobacteria	delta/epsilon subdivisions	1.63928	39	-	AKNY01	7	1637	1454	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00777288	GCA_000274525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/525/GCA_000274525.2_ASM27452v2	23661595	NQ4161
Neisseria meningitidis 73696	1145157	PRJNA83527	83527	Proteobacteria	Betaproteobacteria	2.26003	51.2	-	APTR01	153	2625	2229	5/1/13	3/21/17	Contig	IGS	SAMN01780107	GCA_000386745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/745/GCA_000386745.2_ASM38674v2	-	73696
Streptococcus pyogenes ABC020056181	1439264	PRJNA233201	233201	Terrabacteria group	Firmicutes	1.83259	38.5	-	JJKT01	2	1882	1761	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567550	GCA_000628625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/625/GCA_000628625.1_Stre_pyog_ABC020056181_V1	-	ABC020056181
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2953	996845	PRJNA63789	63789	Spirochaetes	Spirochaetia	4.54391	35	-	AFKX01	417	4093	3727	6/7/11	5/18/17	Scaffold	J. Craig Venter Institute	SAMN00254350	GCA_000216795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/795/GCA_000216795.2_CLC_glsol134	-	Fiocruz LV2953
Pseudomonas aeruginosa BWHPSA041	1402533	PRJNA219894	219894	Proteobacteria	Gammaproteobacteria	6.89766	65.8	-	AZZM01	12	6627	6441	1/14/14	3/9/17	Scaffold	Broad Institute	SAMN02360705	GCA_000520375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/375/GCA_000520375.1_Pseu_aeru_BWHPSA041_V1	-	BWHPSA041
Acinetobacter baumannii AB_TG27323	1221283	PRJNA172695	172695	Proteobacteria	Gammaproteobacteria	3.96217	39	-	AMIN01	103	3782	3658	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471231	GCA_000301595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/595/GCA_000301595.1_ASM30159v1	-	AB_TG27323
Streptococcus agalactiae str. Gottschalk 999B	1105242	PRJNA86453	86453	Terrabacteria group	Firmicutes	2.12955	35.3	-	ANFD01	28	2216	2107	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991139	GCA_000310985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/310/985/GCA_000310985.1_ASM31098v1	-	Gottschalk 999B
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.16081	41.1	-	CEHH01	116	2192	2063	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234084	GCA_000944215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/215/GCA_000944215.1_Velvet_assembly	-	S94F
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.22685	58.5	-	MTIA01	360	5983	5419	4/28/17	6/9/17	Scaffold	Massey University	SAMN06197065	GCA_002175225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/225/GCA_002175225.1_ASM217522v1	28369338	C54
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.54757	38.3	-	FJBR01	32	3260	3117	2/20/16	3/27/17	Contig	SC	SAMEA2059863	GCA_900054395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/395/GCA_900054395.1_10771_1_29	-	2531STDY5467310
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.66442	50.8	-	CXHN01	389	5190	4466	7/16/15	2/24/17	Scaffold	SC	SAMEA2003847	GCA_001246775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/775/GCA_001246775.1_8289_7_43	-	75677
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.96257	67	-	MUVH01	184	7696	7249	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001967	GCA_001994755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/755/GCA_001994755.1_ASM199475v1	-	VC8412
Burkholderia pseudomallei RF43Bp22	1436040	PRJNA179436	179436	Proteobacteria	Betaproteobacteria	7.11753	68.2	-	JAUN01	96	7383	6811	11/18/15	3/27/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02443741	GCA_001445635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/635/GCA_001445635.1_ASM144563v1	26484663	RF43Bp22
Vibrio cholerae HE-45	991946	PRJNA63899	63899	Proteobacteria	Gammaproteobacteria	4.1252	47.7	-	ALED01	29	3929	3685	7/18/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00621717	GCA_000279285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/285/GCA_000279285.1_ASM27928v1	-	HE-45
Clostridioides difficile P59	1151428	PRJNA86033	86033	Terrabacteria group	Firmicutes	4.22355	28.4	-	AVMQ01	68	3967	3799	8/20/13	3/15/17	Contig	Institute for Genome Sciences	SAMN01766718	GCA_000452005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/005/GCA_000452005.1_ASM45200v1	-	P59
Vibrio parahaemolyticus S037	1394584	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.06213	45.3	-	AWLY01	797	5016	4557	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338898	GCA_000491435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/435/GCA_000491435.1_S037	-	S037
Klebsiella pneumoniae BIDMC 2A	1328399	PRJNA202002	202002	Proteobacteria	Gammaproteobacteria	5.49337	57.3	-	JCNJ01	7	5560	5329	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138621	GCA_000567485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/485/GCA_000567485.1_Kleb_pneu_BIDMC_2A_V2	-	BIDMC 2A
Enterococcus faecalis EnGen0311	749509	PRJNA89045	89045	Terrabacteria group	Firmicutes	3.25099	37.2	-	AJEF01	26	3391	3179	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809218	GCA_000394915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/915/GCA_000394915.1_Ente_faec_WH245_V1	-	WH245
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.15031	52.4	-	CHDW01	75	2518	2194	4/21/15	4/11/17	Contig	SC	SAMEA1690428	GCA_001355015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/015/GCA_001355015.1_8727_8_59	-	GCGS155
Enterococcus faecium EnGen0187	1157482	PRJNA88463	88463	Terrabacteria group	Firmicutes	2.64532	38.3	-	AITT01	16	2679	2441	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808911	GCA_000396725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/725/GCA_000396725.1_Ente_faec_HF50106_V1	-	HF50106
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.14975	41.2	-	CWDV01	83	2095	1914	6/23/15	3/26/17	Contig	SC	SAMEA1033034	GCA_001179385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/385/GCA_001179385.1_6903_7_38	-	EQUI0183
Spiroplasma sabaudiense Ar-1343	1276257	PRJNA184750	184750	Terrabacteria group	Tenericutes	1.07595	30.2	chromosome:NZ_CP006934.1/CP006934.1	-	1	978	936	2/7/14	4/17/17	Complete Genome	Academia Sinica	SAMN03081504	GCA_000565215.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/215/GCA_000565215.1_ASM56521v1	24534435	Ar-1343
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.36339	59.9	-	FCFK01	30	5153	4971	1/21/16	3/27/17	Scaffold	SC	SAMEA2273887	GCA_001538905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/905/GCA_001538905.1_12082_2_23	-	2880STDY5682814
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.77608	31.2	-	FBDZ01	44	1866	1761	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683171	GCA_001487555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/555/GCA_001487555.1_SS_2286	-	n/a
Enterobacter cloacae	550	PRJNA393769	393769	Proteobacteria	Gammaproteobacteria	4.69595	55.9	-	NPNS01	31	4575	4381	8/30/17	9/1/17	Scaffold	National University of Singapore and Genome Institute of Singapore	SAMN07448200	GCA_002278335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/335/GCA_002278335.1_ASM227833v1	-	DS8397
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.26864	64.1	-	FVEA01	32	5343	5159	3/10/17	3/18/17	Contig	SC	SAMEA2070658	GCA_900131965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/965/GCA_900131965.1_10665_4_41	-	296
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.71982	67.1	-	LPIQ01	139	7056	6656	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449568	GCA_001533325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/325/GCA_001533325.1_ASM153332v1	-	MSMB2163WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.08331	55.4	-	LRJT01	65	5030	4794	1/22/16	3/27/17	Contig	JCVI	SAMN04430993	GCA_001525205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/205/GCA_001525205.1_ASM152520v1	-	SMART_1348
Pseudomonas sp. AP19	1535623	PRJNA320274	320274	Proteobacteria	Gammaproteobacteria	7.39368	59.4	-	LXJP01	156	6944	6673	9/15/16	4/13/17	Contig	Universidad Nacional Autonoma de Mexico	SAMN04931646	GCA_001728855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/855/GCA_001728855.1_1D4v1.0	-	AP19
Streptomyces sp. NRRL S-104	1609135	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.17109	72.5	-	JZWW01	434	7462	7044	3/31/15	3/11/17	Contig	University of Illinois	SAMN03323303	GCA_000966965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/965/GCA_000966965.1_ASM96696v1	-	NRRL S-104
Bacillus sp. cl95	1761761	PRJEB17499	351652	Terrabacteria group	Firmicutes	4.00299	38.6	-	FOYF01	20	3993	3848	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488577	GCA_900115925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/925/GCA_900115925.1_IMG-taxon_2642422539_annotated_assembly	-	CL95
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	4.91204	47.8	-	FMFM01	998	4490	4425	8/16/16	8/16/16	Scaffold	SC	SAMEA3545335	GCA_900066525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/525/GCA_900066525.1_13470_2_88	-	-
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.72095	48.1	-	FMFH01	86	3415	3357	8/16/16	8/16/16	Scaffold	SC	SAMEA3545336	GCA_900066535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/535/GCA_900066535.1_13470_2_89	-	-
Bacillus sp. 103mf	1761751	PRJEB17549	352024	Terrabacteria group	Firmicutes	5.12312	35.8	-	FPAF01	47	5183	4788	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488145	GCA_900116295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/295/GCA_900116295.1_IMG-taxon_2636416172_annotated_assembly	-	103MF
Streptomyces sp. NRRL B-1568	1609106	PRJNA238534	238534	Terrabacteria group	Actinobacteria	3.38401	71.1	-	JZWZ01	357	2896	2644	3/31/15	3/11/17	Contig	University of Illinois	SAMN03327474	GCA_000967025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/025/GCA_000967025.1_ASM96702v1	-	NRRL B-1568
Pseudomonas sp. 21C1	1843690	PRJNA320303	320303	Proteobacteria	Gammaproteobacteria	5.34222	62	-	LXJR01	101	4838	4680	9/15/16	4/13/17	Contig	Instituto de Ecologia	SAMN04932283	GCA_001728865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/865/GCA_001728865.1_ASM172886v1	-	21C1
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.15899	55.3	-	LRJJ01	100	5086	4850	1/22/16	3/27/17	Contig	JCVI	SAMN04431003	GCA_001525225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/225/GCA_001525225.1_ASM152522v1	-	SMART_1216
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.43089	67.3	-	LPJF01	78	6695	6373	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449583	GCA_001533365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/365/GCA_001533365.1_ASM153336v1	-	MSMB2207WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96514	64.2	-	FSBF01	16	4905	4768	12/14/16	3/21/17	Contig	SC	SAMEA2071369	GCA_900131975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/975/GCA_900131975.1_10665_4_43	-	298
Enterobacter cloacae	550	PRJNA393769	393769	Proteobacteria	Gammaproteobacteria	4.94502	54.8	-	NPNV01	48	4801	4591	8/30/17	9/1/17	Scaffold	National University of Singapore and Genome Institute of Singapore	SAMN07448197	GCA_002278355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/355/GCA_002278355.1_ASM227835v1	-	DS9199
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.71006	31.3	-	FBHF01	30	1773	1691	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683253	GCA_001487575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/575/GCA_001487575.1_UNAJC222	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.14886	60	-	FCLT01	31	4858	4710	1/21/16	3/27/17	Scaffold	SC	SAMEA2273974	GCA_001538925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/925/GCA_001538925.1_12082_3_9	-	2880STDY5682901
Candidatus Kinetoplastibacterium desouzaii TCC079E	1208919	PRJNA169067	169067	Proteobacteria	Betaproteobacteria	0.833125	30.2	chromosome:NC_020294.1/CP003803.1	-	1	796	739	2/19/13	4/17/17	Complete Genome	VCU	SAMN02641643	GCA_000340795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/795/GCA_000340795.1_ASM34079v1	23345457	TCC079E
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15394	41.1	-	CVZT01	76	2086	1923	6/24/15	3/26/17	Contig	SC	SAMEA1033035	GCA_001179405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/405/GCA_001179405.1_6903_3_27	-	EQUI0076
Enterococcus faecium EnGen0188	1157483	PRJNA88465	88465	Terrabacteria group	Firmicutes	2.62913	38.2	-	AITU01	7	2670	2451	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808912	GCA_000396745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/745/GCA_000396745.1_Ente_faec_HF50203_V1	-	HF50203
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.13867	52.4	-	CHEA01	85	2496	2179	4/21/15	4/11/17	Contig	SC	SAMEA1690432	GCA_001355035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/035/GCA_001355035.1_8289_2_46	-	GCGS046
Enterococcus faecalis EnGen0302	1158660	PRJNA89047	89047	Terrabacteria group	Firmicutes	3.19619	37.4	-	AJEG01	6	3296	3101	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809219	GCA_000394935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/935/GCA_000394935.1_Ente_faec_CH116_V1	-	CH116
Klebsiella pneumoniae BIDMC 1	1328398	PRJNA202001	202001	Proteobacteria	Gammaproteobacteria	5.696	57.1	-	JCNK01	7	5806	5545	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138620	GCA_000567505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/505/GCA_000567505.1_Kleb_pneu_BIDMC_1_V2	-	BIDMC 1
Vibrio parahaemolyticus S036	1394583	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.03362	45.3	-	AWLZ01	498	4777	4608	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338897	GCA_000491455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/455/GCA_000491455.1_S036	-	S036
Clostridioides difficile P61	1151429	PRJNA86035	86035	Terrabacteria group	Firmicutes	4.03295	28.6	-	AVMR01	54	3752	3608	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766719	GCA_000452025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/025/GCA_000452025.2_ASM45202v2	-	P61
Vibrio cholerae CP1032(5)	991923	PRJNA63853	63853	Proteobacteria	Gammaproteobacteria	3.97147	47.5	-	ALDA01	17	3807	3624	7/18/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00622029	GCA_000279305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/305/GCA_000279305.1_ASM27930v1	26980836	CP1032(5)
Burkholderia pseudomallei Gu1909a	1321246	PRJNA179436	179436	Proteobacteria	Betaproteobacteria	7.07465	68.2	-	ARZG01	355	7484	6757	11/18/15	3/27/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02044374	GCA_001445855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/855/GCA_001445855.1_ASM144585v1	26484663	Gu1909a
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.12789	66.9	-	MUPZ01	135	7792	7362	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001807	GCA_001994775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/775/GCA_001994775.1_ASM199477v1	-	VC6133
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.79928	50.7	-	CXMT01	394	5402	4622	7/16/15	2/24/17	Scaffold	SC	SAMEA2055829	GCA_001246975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/975/GCA_001246975.1_9870_6_25	-	143564
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.38588	38.3	-	FJBG01	24	3074	2952	2/20/16	3/27/17	Contig	SC	SAMEA2059988	GCA_900054405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/405/GCA_900054405.1_10771_1_50	-	2531STDY5467331
Pseudomonas syringae pv. actinidiae	103796	PRJNA359702	359702	Proteobacteria	Gammaproteobacteria	6.23835	58.5	-	MTIB01	327	6043	5474	4/28/17	6/9/17	Scaffold	Massey University	SAMN06197066	GCA_002175245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/245/GCA_002175245.1_ASM217524v1	28369338	C62
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.42965	41.6	-	CEEO01	331	2367	2206	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233932	GCA_000944335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/335/GCA_000944335.1_Velvet_assembly	-	LS6D
Streptococcus agalactiae CCUG 37740	1105260	PRJNA86233	86233	Terrabacteria group	Firmicutes	2.12861	35.1	-	ANDG01	41	2195	2064	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991111	GCA_000311005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/005/GCA_000311005.1_ASM31100v1	-	CCUG 37740
Acinetobacter baumannii AB_TG27331	1221285	PRJNA172697	172697	Proteobacteria	Gammaproteobacteria	4.0622	39	-	AMIP01	148	3931	3783	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471233	GCA_000301615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/615/GCA_000301615.1_ASM30161v1	-	AB_TG27331
Pseudomonas aeruginosa BWHPSA040	1402532	PRJNA219893	219893	Proteobacteria	Gammaproteobacteria	6.45299	66.3	-	AZZN01	3	6024	5880	1/14/14	3/9/17	Scaffold	Broad Institute	SAMN02360704	GCA_000520395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/395/GCA_000520395.1_Pseu_aeru_BWHPSA040_V1	-	BWHPSA040
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2948	996844	PRJNA63787	63787	Spirochaetes	Spirochaetia	4.5404	35	-	AFKW01	433	4084	3713	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254349	GCA_000216815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/815/GCA_000216815.2_CLC_glsol133	-	Fiocruz LV2948
Streptococcus pyogenes ABC020056883	1439272	PRJNA233203	233203	Terrabacteria group	Firmicutes	1.77636	38.4	-	JJKU01	6	1806	1700	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567552	GCA_000628645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/645/GCA_000628645.1_Stre_pyog_ABC020056883_V1	-	ABC020056883
Neisseria meningitidis 73704	1145158	PRJNA83529	83529	Proteobacteria	Betaproteobacteria	2.10715	51.9	-	APTS01	123	2434	2068	5/1/13	3/21/17	Contig	IGS	SAMN01780108	GCA_000386765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/765/GCA_000386765.2_ASM38676v2	-	73704
Helicobacter pylori NQ4110	992031	PRJNA64089	64089	Proteobacteria	delta/epsilon subdivisions	1.59665	39.1	-	AKNZ01	2	1577	1414	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00777287	GCA_000274545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/545/GCA_000274545.2_ASM27454v2	23661595	NQ4110
Streptococcus pneumoniae GA04672	1069627	PRJNA70987	70987	Terrabacteria group	Firmicutes	2.13576	39.7	-	ALCJ01	9	2323	2052	7/18/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00773079	GCA_000279495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/495/GCA_000279495.1_ASM27949v1	-	GA04672
Candidatus Uzinura diaspidicola str. ASNER	1133592	PRJNA81015	81015	FCB group	Bacteroidetes/Chlorobi group	0.263431	30.2	chromosome:CP003263.1	-	1	272	227	1/17/13	1/31/14	Complete Genome	Yale University	SAMN02604333	GCA_000331975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/975/GCA_000331975.1_ASM33197v1	-	ASNER
Mycobacterium tuberculosis 1010SM	1438833	PRJNA233384	233384	Terrabacteria group	Actinobacteria	4.40673	65.6	-	JKAO01	103	4336	4119	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02567732	GCA_000649615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/615/GCA_000649615.1_Myco_tube_1010SM_V1	-	1010SM
Bacillus cereus	1396	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.59015	35.1	-	LOMU01	158	6020	5717	3/9/16	3/27/17	Contig	Cornell University	SAMN03800029	GCA_001584105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/105/GCA_001584105.1_ASM158410v1	-	FSL W8-0483
Staphylococcus epidermidis	1282	PRJNA319642	319642	Terrabacteria group	Firmicutes	2.45778	32	-	LYVU01	49	2420	2293	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN05187225	GCA_001659245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/245/GCA_001659245.1_ASM165924v1	-	ENVH350
Listeria monocytogenes	1639	PRJNA253140	253140	Terrabacteria group	Firmicutes	2.97943	37.9	-	JOKV01	25	3046	2969	6/26/14	2/26/17	Contig	Health Canada	SAMN02867583	GCA_000712385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/385/GCA_000712385.1_HPB5415	26067972	HPB5415
Yersinia pestis CMCC67001	755934	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.34067	47.8	-	ADRB01	1099	4111	3857	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403050	GCA_000324305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/305/GCA_000324305.1_ASM32430v1	23271803	CMCC67001
Campylobacter jejuni str. NCCP No. 15742	1293289	PRJNA188654	188654	Proteobacteria	delta/epsilon subdivisions	1.59259	30.6	-	APJU01	5	1686	1537	5/16/13	3/15/17	Contig	Korea National Institute of Health	SAMN02470148	GCA_000397125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/125/GCA_000397125.1_Campylobacter_jejuni1.0	-	NCCP No. 15742
Campylobacter jejuni	197	PRJNA350584	350584	Proteobacteria	delta/epsilon subdivisions	1.74938	30.1955	chromosome:NZ_CP017863.1/CP017863.1; plasmid pCJDM100:NZ_CP017864.1/CP017864.1	-	2	1873	1747	11/3/16	3/20/17	Complete Genome	University of Tulsa	SAMN05942179	GCA_001865435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/435/GCA_001865435.1_ASM186543v1	-	IF1100
Staphylococcus aureus M0173	1157013	PRJNA88583	88583	Terrabacteria group	Firmicutes	2.88219	32.9	-	AIVZ01	4	3011	2840	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00792138	GCA_000360285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/285/GCA_000360285.1_Stap_aure_M0173_V1	-	M0173
Staphylococcus aureus M0177	1158513	PRJNA88935	88935	Terrabacteria group	Firmicutes	2.8608	32.9	-	AJCF01	6	2990	2836	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809164	GCA_000360305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/305/GCA_000360305.1_Stap_aure_M0177_V1	-	M0177
Campylobacter jejuni	197	PRJNA314911	314911	Proteobacteria	delta/epsilon subdivisions	1.82632	30.1814	chromosome:NZ_CP014744.1/CP014744.1; plasmid pCJDM67 L:NZ_CP014745.1/CP014745.1; plasmid pCJDM67 S:NZ_CP014746.1/CP014746.1	-	3	1944	1801	3/11/16	3/19/17	Complete Genome	University of Tulsa	SAMN04545450	GCA_001587015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/015/GCA_001587015.1_ASM158701v1	-	OD267
Campylobacter jejuni subsp. jejuni 81-176-UMCW7	1436885	PRJNA230835	230835	Proteobacteria	delta/epsilon subdivisions	1.6478	30.4929	plasmid pVir:NZ_AZNS01000034.1/AZNS01000034.1	AZNS01	34	1725	1579	12/18/13	3/15/17	Contig	University of Michigan	SAMN02471883	GCA_000509895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/509/895/GCA_000509895.1_UMCW7	24503981	81-176-UMCW7
Yersinia pestis CMCC71001	755935	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.25419	48.2	-	ADRC01	1744	4014	3628	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403051	GCA_000324325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/325/GCA_000324325.1_ASM32432v1	23271803	CMCC71001
Listeria monocytogenes	1639	PRJNA253133	253133	Terrabacteria group	Firmicutes	2.97908	37.9	-	JOKU01	38	3048	2970	6/26/14	2/26/17	Contig	Health Canada	SAMN02867555	GCA_000712425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/425/GCA_000712425.1_ASM71242v1	-	HPB2088
Staphylococcus epidermidis	1282	PRJNA319644	319644	Terrabacteria group	Firmicutes	2.49988	32.1	-	LYWB01	73	2485	2345	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN05187232	GCA_001659255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/255/GCA_001659255.1_ASM165925v1	-	ENVH144
Bacillus cereus	1396	PRJNA323940	323940	Terrabacteria group	Firmicutes	5.45306	35	-	LZRI01	36	5861	5522	7/1/16	3/28/17	Contig	California State University Fresno	SAMN05194404	GCA_001677965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/965/GCA_001677965.1_ASM167796v1	-	MROC2
Mycobacterium tuberculosis Wt 21231	1438828	PRJNA233392	233392	Terrabacteria group	Actinobacteria	4.39043	65.6	-	JKAN01	28	4284	4119	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02567760	GCA_000649635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/635/GCA_000649635.1_Myco_bovi_Wt_21231_V1	-	Wt 21231
Candidatus Ishikawaella capsulata Mpkobe	476281	PRJNA20927	20927	Proteobacteria	Gammaproteobacteria	0.754729	30.1685	chromosome:NZ_AP010872.1/AP010872.1; plasmid pAst:NZ_AP010873.1/AP010873.1	-	2	669	611	7/2/09	4/17/17	Complete Genome	The Open University of Japan	SAMD00061091	GCA_000828515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/515/GCA_000828515.1_ASM82851v1	21737395	Mpkobe
Streptococcus pneumoniae GA60190	1105120	PRJNA75279	75279	Terrabacteria group	Firmicutes	2.10418	39.8	-	ALCL01	10	2296	2035	7/18/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00773088	GCA_000279515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/515/GCA_000279515.1_ASM27951v1	-	GA60190
Helicobacter pylori NQ4099	992026	PRJNA64079	64079	Proteobacteria	delta/epsilon subdivisions	1.65064	39	-	AKNU01	6	1609	1454	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00777286	GCA_000274565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/565/GCA_000274565.1_ASM27456v1	23661595	NQ4099
Neisseria meningitidis 81858	1145159	PRJNA83531	83531	Proteobacteria	Betaproteobacteria	2.28923	51.3	-	APTT01	161	2653	2235	5/1/13	3/21/17	Contig	IGS	SAMN01780109	GCA_000386785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/785/GCA_000386785.2_ASM38678v2	-	81858
Streptococcus pyogenes ABC020013256	1439002	PRJNA233219	233219	Terrabacteria group	Firmicutes	1.83084	38.5	-	JJKV01	2	1874	1752	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567568	GCA_000628665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/665/GCA_000628665.1_Stre_pyog_ABC020013256_V1	-	ABC020013256
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2933	996843	PRJNA63785	63785	Spirochaetes	Spirochaetia	4.54575	35	-	AFKV01	534	4143	3712	6/7/11	5/18/17	Scaffold	J. Craig Venter Institute	SAMN00254347	GCA_000216835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/835/GCA_000216835.2_CLC_glsol132	-	Fiocruz LV2933
Pseudomonas aeruginosa BWHPSA039	1402531	PRJNA219892	219892	Proteobacteria	Gammaproteobacteria	6.98304	65.9	-	AZZO01	10	6605	6383	1/14/14	3/9/17	Scaffold	Broad Institute	SAMN02360703	GCA_000520415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/415/GCA_000520415.1_Pseu_aeru_BWHPSA039_V1	-	BWHPSA039
Acinetobacter baumannii AB_TG5064	1221290	PRJNA172702	172702	Proteobacteria	Gammaproteobacteria	3.76097	39.5	-	AMIU01	471	3689	3447	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471236	GCA_000301655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/655/GCA_000301655.1_ASM30165v1	-	AB_TG5064
Streptococcus agalactiae STIR-CD-25	1154853	PRJNA86365	86365	Terrabacteria group	Firmicutes	2.05428	35.2	-	ANEK01	35	2137	2023	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993660	GCA_000311025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/025/GCA_000311025.1_ASM31102v1	-	STIR-CD-25
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.15048	41.1	-	CEDZ01	157	2110	1963	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233911	GCA_000944375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/375/GCA_000944375.1_Velvet_assembly	-	LS3E
Pseudomonas syringae	317	PRJEB16547	349844	Proteobacteria	Gammaproteobacteria	5.90054	58.8	-	FNNY01	70	5505	5125	10/22/16	3/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444514	GCA_900106705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/705/GCA_900106705.1_IMG-taxon_2687453747_annotated_assembly	-	BS2731
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.41438	38.3	-	FJGE01	22	3120	3013	2/20/16	3/27/17	Contig	SC	SAMEA2080620	GCA_900054415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/415/GCA_900054415.1_10625_2_59	-	2532STDY5467532
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.72751	50.7	-	CWUU01	387	5282	4525	7/16/15	2/24/17	Scaffold	SC	SAMEA3345061	GCA_001247045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/045/GCA_001247045.1_Sg_201311953_TACAGC_L001	-	201311953_1
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.03359	67	-	MUWS01	189	7742	7218	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05002008	GCA_001994795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/795/GCA_001994795.1_ASM199479v1	-	VC9872
Burkholderia pseudomallei MSHR1950	1321247	PRJNA179436	179436	Proteobacteria	Betaproteobacteria	7.10405	68.1	-	ARZH01	433	7487	6656	11/18/15	3/27/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02044375	GCA_001445865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/865/GCA_001445865.1_ASM144586v1	26484663	MSHR1950
Vibrio cholerae CP1038(11)	991925	PRJNA63857	63857	Proteobacteria	Gammaproteobacteria	4.05827	47.5	-	ALDC01	18	3888	3708	7/18/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00622028	GCA_000279325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/325/GCA_000279325.1_ASM27932v1	-	CP1038(11)
Clostridioides difficile P78	1151430	PRJNA86037	86037	Terrabacteria group	Firmicutes	4.1196	28.5	-	AVMS01	60	3868	3703	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766732	GCA_000452045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/045/GCA_000452045.2_ASM45204v2	-	P78
Vibrio parahaemolyticus S035	1394582	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.12037	45.2	-	AWMA01	543	4907	4708	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338896	GCA_000491475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/475/GCA_000491475.1_S035	-	S035
Klebsiella pneumoniae UCICRE 1	1328389	PRJNA201984	201984	Proteobacteria	Gammaproteobacteria	5.74899	57.1	-	JCNL01	7	5789	5528	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138606	GCA_000567525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/525/GCA_000567525.1_Kleb_pneu_UCI_1_V1	-	UCICRE 1
Enterococcus faecalis EnGen0306	1158661	PRJNA89049	89049	Terrabacteria group	Firmicutes	3.22235	37.3	-	AJEH01	20	3338	3143	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809220	GCA_000394955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/955/GCA_000394955.1_Ente_faec_CH136_V1	-	CH136
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14522	52.4	-	CFSA01	60	2520	2185	3/15/15	4/11/17	Contig	SC	SAMEA1690434	GCA_001355075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/075/GCA_001355075.1_8727_8_71	-	GCGS167
Enterococcus faecium EnGen0189	1157484	PRJNA88467	88467	Terrabacteria group	Firmicutes	2.64876	38.3	-	AITV01	11	2706	2468	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808914	GCA_000396765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/765/GCA_000396765.1_Ente_faec_HF50204_V1	-	HF50204
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12367	41.2	-	CVXE01	79	2048	1875	6/24/15	3/26/17	Contig	SC	SAMEA1033036	GCA_001179425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/425/GCA_001179425.1_6817_1_52	-	EQUI0005
Campylobacter jejuni	197	PRJNA350584	350584	Proteobacteria	delta/epsilon subdivisions	1.81285	30.1516	chromosome:NZ_CP017856.1/CP017856.1; plasmid pCJDM204L:NZ_CP017854.1/CP017854.1; plasmid pCJDM204S:NZ_CP017855.1/CP017855.1	-	3	1905	1744	11/7/16	3/20/17	Complete Genome	University of Tulsa	SAMN05942185	GCA_001870105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/105/GCA_001870105.1_ASM187010v1	-	ZP3204
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.18168	59.9	-	FCJO01	18	4971	4807	1/21/16	3/27/17	Scaffold	SC	SAMEA2274005	GCA_001538945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/945/GCA_001538945.1_12082_3_34	-	2880STDY5682933
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.60698	31.7	-	FBMY01	21	1609	1554	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683401	GCA_001487595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/595/GCA_001487595.1_H053120426	-	n/a
Enterobacter cloacae	550	PRJNA393769	393769	Proteobacteria	Gammaproteobacteria	4.72954	55.3	-	NPNU01	48	4594	4400	8/30/17	9/1/17	Scaffold	National University of Singapore and Genome Institute of Singapore	SAMN07448198	GCA_002278375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/375/GCA_002278375.1_ASM227837v1	-	DS18454
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.25227	64.1	-	FSBG01	21	5344	5164	12/14/16	3/21/17	Contig	SC	SAMEA2070660	GCA_900131985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/985/GCA_900131985.1_10665_4_47	-	302
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.11542	67.4	-	LPJM01	96	6423	6089	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449591	GCA_001533405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/405/GCA_001533405.1_ASM153340v1	-	MSMB2151WGS
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.05344	54.8	-	LRJE01	88	4982	4749	1/22/16	3/27/17	Contig	JCVI	SAMN04431008	GCA_001525305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/305/GCA_001525305.1_ASM152530v1	-	SMART_1262
Pseudomonas sp. 1D4	1843691	PRJNA320297	320297	Proteobacteria	Gammaproteobacteria	5.84913	66.3	-	LXJQ01	136	5446	5237	9/15/16	4/13/17	Contig	Instituto de Ecologia	SAMN04932255	GCA_001728925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/925/GCA_001728925.1_ASM172892v1	-	1D4
Streptomyces sp. NRRL B-24891	1417980	PRJNA279266	279266	Terrabacteria group	Actinobacteria	8.28022	70.4	-	LATD01	648	7305	6602	4/29/15	3/12/17	Contig	USDA/ARS/NCAUR	SAMN03444664	GCA_000981895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/895/GCA_000981895.1_ASM98189v1	-	NRRL B-24891
Bacillus sp. ru9509.4	1761768	PRJEB17914	353816	Terrabacteria group	Firmicutes	3.70601	41.2	-	FPJL01	44	3864	3668	11/17/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487921	GCA_900119345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/345/GCA_900119345.1_IMG-taxon_2606217744_annotated_assembly	-	RU9509.4
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.04126	38.4	-	FMEG01	52	2777	2718	8/16/16	8/16/16	Scaffold	SC	SAMEA3545337	GCA_900066545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/545/GCA_900066545.1_13470_2_90	-	-
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	4.16964	46.2	-	FMEK01	99	3883	3824	8/16/16	8/16/16	Scaffold	SC	SAMEA3545339	GCA_900066565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/565/GCA_900066565.1_13470_2_92	-	-
Bacillus sp. cl25	1761760	PRJEB18325	355761	Terrabacteria group	Firmicutes	5.60241	35.1	-	FQZW01	57	5995	5682	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04488576	GCA_900142155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/155/GCA_900142155.1_IMG-taxon_2639762622_annotated_assembly	-	CL25
Streptomyces sp. KE1	1638939	PRJNA280032	280032	Terrabacteria group	Actinobacteria	6.83005	73.4	-	LAYX01	122	6047	5646	5/28/15	3/11/17	Contig	Institute of Genomics and Integrative Biology	SAMN03454257	GCA_001014595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/014/595/GCA_001014595.1_ASM101459v1	-	KE1
Pseudomonas sp. AP42	1535632	PRJNA320532	320532	Proteobacteria	Gammaproteobacteria	6.76913	59.8	-	LYSO01	227	6306	6028	9/15/16	4/13/17	Contig	Instituto de Ecologia	SAMN04942700	GCA_001728935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/935/GCA_001728935.1_ASM172893v1	-	AP42
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.05791	54.8	-	LRJF01	88	4982	4757	1/22/16	3/27/17	Contig	JCVI	SAMN04431007	GCA_001525325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/325/GCA_001525325.1_ASM152532v1	-	SMART_1261
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.13581	67.5	-	LPKZ01	102	6418	6080	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449632	GCA_001533415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/415/GCA_001533415.1_ASM153341v1	-	MSMB720WGS
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.1944	64.1	-	FVED01	7	5329	5155	3/10/17	3/18/17	Contig	SC	SAMEA2068802	GCA_900131995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/995/GCA_900131995.1_10665_4_45	-	300
Enterobacter cloacae	550	PRJNA393769	393769	Proteobacteria	Gammaproteobacteria	4.87234	55.9	-	NPNW01	48	4764	4537	8/30/17	9/1/17	Scaffold	National University of Singapore and Genome Institute of Singapore	SAMN07448196	GCA_002278385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/385/GCA_002278385.1_ASM227838v1	-	DS05262
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66026	31.4	-	FBBL01	19	1721	1627	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683099	GCA_001487615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/615/GCA_001487615.1_EC3505	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.10741	59.9	-	FCJQ01	18	4809	4640	1/21/16	3/27/17	Scaffold	SC	SAMEA2274010	GCA_001538965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/965/GCA_001538965.1_12082_3_39	-	2880STDY5682938
Campylobacter jejuni subsp. jejuni	32022	PRJNA338271	338271	Proteobacteria	delta/epsilon subdivisions	1.75989	30.1453	chromosome:NZ_CP017029.1/CP017029.1; plasmid pCJ14980A:NZ_CP017030.1/CP017030.1	-	2	1817	1681	8/31/16	3/20/17	Complete Genome	"USDA, ARS, WRRC"	SAMN05544802	GCA_001717625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/625/GCA_001717625.1_ASM171762v1	-	14980A
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12709	41.2	-	CVYM01	77	2047	1874	6/23/15	3/26/17	Contig	SC	SAMEA1033037	GCA_001179445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/445/GCA_001179445.1_6830_4_78	-	EQUI0223
Enterococcus faecium EnGen0190	1157485	PRJNA88469	88469	Terrabacteria group	Firmicutes	2.82188	38.3	-	AITW01	19	2911	2663	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808915	GCA_000396785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/785/GCA_000396785.1_Ente_faec_HF50215_V1	-	HF50215
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.19565	52.3	-	CFMC01	77	2578	2255	3/15/15	4/11/17	Contig	SC	SAMEA1690441	GCA_001355095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/095/GCA_001355095.1_8289_2_33	-	GCGS033
Enterococcus faecalis EnGen0291	1158662	PRJNA89051	89051	Terrabacteria group	Firmicutes	2.87252	37.5	-	AJEI01	11	2937	2824	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809222	GCA_000394975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/975/GCA_000394975.1_Ente_faec_T16_V1	-	T16
Klebsiella pneumoniae BWH 41	1328387	PRJNA201978	201978	Proteobacteria	Gammaproteobacteria	5.63678	57.2	-	JCNM01	3	5705	5481	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138603	GCA_000567545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/545/GCA_000567545.1_Kleb_pneu_BWH_41_V1	-	BWH 41
Vibrio parahaemolyticus S034	1394581	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.14806	45.2	-	AWMB01	460	4913	4704	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338895	GCA_000491495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/495/GCA_000491495.1_S034	-	S034
Clostridioides difficile P69	1151433	PRJNA86043	86043	Terrabacteria group	Firmicutes	4.21313	28.4	-	AVMT01	49	3927	3751	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766723	GCA_000452065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/065/GCA_000452065.2_ASM45206v2	-	P69
Vibrio cholerae CP1042(15)	991927	PRJNA63861	63861	Proteobacteria	Gammaproteobacteria	4.04538	47.5	-	ALDF01	20	3882	3698	7/18/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00622036	GCA_000279345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/345/GCA_000279345.1_ASM27934v1	-	CP1042(15)
Burkholderia pseudomallei RF67BP1	1321254	PRJNA179436	179436	Proteobacteria	Betaproteobacteria	6.99908	68.3	-	ARZQ01	282	7361	6712	11/18/15	3/27/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02044385	GCA_001445875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/875/GCA_001445875.1_ASM144587v1	26484663	RF67BP1
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.71338	67	-	MUPT01	120	7367	6970	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001801	GCA_001994815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/815/GCA_001994815.1_ASM199481v1	-	VC2448
Shigella sonnei	624	PRJEB2460	204320	Proteobacteria	Gammaproteobacteria	4.60154	50.9	-	CXFM01	361	5013	4430	7/17/15	2/24/17	Scaffold	SC	SAMEA1027688	GCA_001247155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/155/GCA_001247155.1_6350_1_16	-	sh96-5282
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.41108	38.3	-	FJGD01	20	3120	3015	2/20/16	3/27/17	Contig	SC	SAMEA2080603	GCA_900054425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/425/GCA_900054425.1_10625_2_2	-	2532STDY5467475
Pseudomonas syringae	317	PRJEB16566	349826	Proteobacteria	Gammaproteobacteria	6.2057	58.5	-	FNPP01	47	5881	5558	10/22/16	3/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444506	GCA_900107345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/345/GCA_900107345.1_IMG-taxon_2687453749_annotated_assembly	-	BS2900
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.17698	41	-	CECU01	153	2206	2056	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233876	GCA_000944455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/455/GCA_000944455.1_Velvet_assembly	-	LL-U
Streptococcus agalactiae MRI Z1-209	1154873	PRJNA86405	86405	Terrabacteria group	Firmicutes	2.10394	35.3	-	ANES01	59	2200	2053	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993333	GCA_000311045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/045/GCA_000311045.1_ASM31104v1	-	MRI Z1-209
Acinetobacter baumannii AB_1536-8	1221244	PRJNA172655	172655	Proteobacteria	Gammaproteobacteria	3.84419	38.8	-	AMHA01	194	3648	3496	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471274	GCA_000301835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/835/GCA_000301835.1_ASM30183v1	-	AB_1536-8
Pseudomonas aeruginosa BWHPSA038	1402530	PRJNA219891	219891	Proteobacteria	Gammaproteobacteria	6.64619	66.2	-	AZZP01	12	6289	6092	1/14/14	3/9/17	Scaffold	Broad Institute	SAMN02360702	GCA_000520435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/435/GCA_000520435.1_Pseu_aeru_BWHPSA038_V1	-	BWHPSA038
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2908	996842	PRJNA63781	63781	Spirochaetes	Spirochaetia	4.53477	35	-	AFKU01	608	4166	3699	6/7/11	5/18/17	Scaffold	J. Craig Venter Institute	SAMN00254348	GCA_000216855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/855/GCA_000216855.2_CLC_glsol130	-	Fiocruz LV2908
Streptococcus pyogenes ABC020017280	1439027	PRJNA233236	233236	Terrabacteria group	Firmicutes	1.80663	38.6	-	JJKW01	7	1825	1692	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567585	GCA_000628685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/685/GCA_000628685.1_Stre_pyog_ABC020017280_V1	-	ABC020017280
Neisseria meningitidis 2002020	1145160	PRJNA83533	83533	Proteobacteria	Betaproteobacteria	2.20174	51.7	-	APTU01	138	2541	2165	5/1/13	3/21/17	Contig	IGS	SAMN01780110	GCA_000386805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/805/GCA_000386805.2_ASM38680v2	-	2002020
Helicobacter pylori NQ4076	992029	PRJNA64085	64085	Proteobacteria	delta/epsilon subdivisions	1.63271	39	-	AKNX01	4	1590	1447	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00777285	GCA_000274585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/585/GCA_000274585.1_ASM27458v1	23661595	NQ4076
Streptococcus pneumoniae GA17301	760785	PRJNA48727	48727	Terrabacteria group	Firmicutes	2.13967	39.7	-	ALCI01	10	2363	2065	7/18/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00761083	GCA_000279575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/575/GCA_000279575.1_ASM27957v1	-	GA17301
Ehrlichia chaffeensis str. Heartland	1249651	PRJNA178991	178991	Proteobacteria	Alphaproteobacteria	1.17272	30.1	chromosome:NZ_CP007473.1/CP007473.1	-	1	943	880	4/17/14	4/2/17	Complete Genome	IGS	SAMN02203185	GCA_000632815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/815/GCA_000632815.1_ASM63281v1	-	Heartland
Mycobacterium tuberculosis Wt 21419	1438829	PRJNA233397	233397	Terrabacteria group	Actinobacteria	4.37186	65.6	-	JKAI01	43	4268	4081	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02567765	GCA_000649695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/695/GCA_000649695.1_Myco_bovi_Wt_21419_V1	-	Wt 21419
Bacillus cereus	1396	PRJNA276170	276170	Terrabacteria group	Firmicutes	5.19827	35.2	-	LEBZ01	520	5749	5044	7/12/16	4/10/17	Contig	University of Oslo	SAMN03733620	GCA_001683695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/695/GCA_001683695.1_ASM168369v1	-	B06.009
Staphylococcus epidermidis	1282	PRJNA319642	319642	Terrabacteria group	Firmicutes	2.50841	32.2	-	LYVV01	118	2539	2383	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN05187217	GCA_001659305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/305/GCA_001659305.1_ASM165930v1	-	ENVP605
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.00211	37.8	-	JOWC01	25	3074	2980	7/15/14	2/26/17	Contig	Cornell University	SAMN02741457	GCA_000725925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/925/GCA_000725925.1_ASM72592v1	-	FSL F8-0076
Yersinia pestis CMCC8211	755938	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.41763	47.5	-	ADRD01	797	4129	3907	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403052	GCA_000324345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/345/GCA_000324345.1_ASM32434v1	23271803	CMCC8211
Campylobacter jejuni subsp. jejuni JCM 2013	1236539	PRJDB627	243203	Proteobacteria	delta/epsilon subdivisions	1.66287	30.4	-	BALI01	48	1755	1571	4/1/14	4/17/17	Contig	The University of Tokyo	SAMD00012825	GCA_000614815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/815/GCA_000614815.1_ASM61481v1	-	JCM 2013
Ehrlichia chaffeensis str. Jax	1249652	PRJNA178992	178992	Proteobacteria	Alphaproteobacteria	1.17689	30.1	chromosome:NZ_CP007475.1/CP007475.1	-	1	952	893	4/17/14	4/2/17	Complete Genome	IGS	SAMN02364462	GCA_000632865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/865/GCA_000632865.1_ASM63286v1	-	Jax
Staphylococcus aureus M0192	1157014	PRJNA88585	88585	Terrabacteria group	Firmicutes	2.83871	32.9	-	AIWA01	4	2955	2797	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792139	GCA_000360325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/325/GCA_000360325.1_Stap_aure_M0192_V1	-	M0192
Staphylococcus aureus M0197	1157015	PRJNA88587	88587	Terrabacteria group	Firmicutes	3	33.2	-	AIWB01	8	3130	2951	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792140	GCA_000360345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/345/GCA_000360345.1_Stap_aure_M0197_V1	-	M0197
Ehrlichia chaffeensis str. Liberty	1249653	PRJNA178993	178993	Proteobacteria	Alphaproteobacteria	1.1762	30.1	chromosome:NZ_CP007476.1/CP007476.1	-	1	949	893	4/17/14	4/2/17	Complete Genome	IGS	SAMN02364461	GCA_000632885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/885/GCA_000632885.1_ASM63288v1	-	Liberty
Campylobacter jejuni g113	1316923	PRJNA196599	196599	Proteobacteria	delta/epsilon subdivisions	1.59855	30.5	-	AQPK01	17	1699	1615	4/17/14	3/16/17	Contig	China Agriculture University	SAMN02729336	GCA_000633065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/065/GCA_000633065.1_Cjg113.1	24335515	g113
Yersinia pestis CMCC84033	755940	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.45905	47.7	-	ADRE01	1055	4286	3969	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403053	GCA_000324365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/365/GCA_000324365.1_ASM32436v1	23271803	CMCC84033
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.06764	37.8	-	JOWG01	17	3157	3061	7/15/14	2/26/17	Contig	Cornell University	SAMN02741461	GCA_000725945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/945/GCA_000725945.1_ASM72594v1	-	FSL L3-0257
Staphylococcus epidermidis	1282	PRJNA319642	319642	Terrabacteria group	Firmicutes	2.48291	31.9	-	LYVT01	57	2491	2343	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN05187224	GCA_001659315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/315/GCA_001659315.1_ASM165931v1	-	ENVH113
Bacillus cereus	1396	PRJNA276170	276170	Terrabacteria group	Firmicutes	5.62749	35	-	LEBX01	655	6184	5443	7/12/16	3/28/17	Contig	University of Oslo	SAMN03733622	GCA_001683705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/705/GCA_001683705.1_ASM168370v1	-	AH725
Mycobacterium tuberculosis Mr 4387	1438827	PRJNA233398	233398	Terrabacteria group	Actinobacteria	4.38875	65.6	-	JKAH01	50	4290	4086	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02567766	GCA_000649715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/715/GCA_000649715.1_Myco_bovi_Mr_4387_V1	-	Mr 4387
Ehrlichia chaffeensis str. Osceola	1249654	PRJNA178994	178994	Proteobacteria	Alphaproteobacteria	1.1752	30.1	chromosome:NZ_CP007477.1/CP007477.1	-	1	952	892	4/17/14	4/2/17	Complete Genome	IGS	SAMN02364994	GCA_000632905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/905/GCA_000632905.1_ASM63290v1	-	Osceola
Streptococcus pneumoniae GA47562	760841	PRJNA48873	48873	Terrabacteria group	Firmicutes	2.06332	39.8	-	ALCY01	12	2266	2006	7/18/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00839656	GCA_000279595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/595/GCA_000279595.1_ASM27959v1	-	GA47562
Helicobacter pylori NQ4053	992027	PRJNA64081	64081	Proteobacteria	delta/epsilon subdivisions	1.65203	38.9	-	AKNV01	6	1638	1454	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00777284	GCA_000274605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/605/GCA_000274605.1_ASM27460v1	23661595	NQ4053
Neisseria meningitidis NM477	1145161	PRJNA83535	83535	Proteobacteria	Betaproteobacteria	2.28741	51.7	-	APTV01	155	2653	2274	5/1/13	3/21/17	Contig	IGS	SAMN01780111	GCA_000386825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/825/GCA_000386825.2_ASM38682v2	-	NM477
Streptococcus pyogenes ABC020017774	1439029	PRJNA233237	233237	Terrabacteria group	Firmicutes	1.83129	38.5	-	JJKX01	2	1880	1759	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567586	GCA_000628705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/705/GCA_000628705.1_Stre_pyog_ABC020017774_V1	-	ABC020017774
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2897	996841	PRJNA63779	63779	Spirochaetes	Spirochaetia	4.54733	35	-	AFKT01	366	4069	3736	6/7/11	5/18/17	Scaffold	J. Craig Venter Institute	SAMN00254346	GCA_000216875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/875/GCA_000216875.2_CLC_glsol129	-	Fiocruz LV2897
Pseudomonas aeruginosa BWHPSA037	1402529	PRJNA219890	219890	Proteobacteria	Gammaproteobacteria	7.21858	65.5	-	AZZQ01	29	6941	6668	1/14/14	3/16/17	Scaffold	Broad Institute	SAMN02360701	GCA_000520455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/520/455/GCA_000520455.1_Pseu_aeru_BWHPSA037_V1	-	BWHPSA037
Acinetobacter baumannii AB_1583-8	1221246	PRJNA172657	172657	Proteobacteria	Gammaproteobacteria	3.88961	39.2	-	AMHC01	322	3829	3635	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471247	GCA_000301855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/855/GCA_000301855.1_ASM30185v1	-	AB_1583-8
Streptococcus agalactiae str. Gottschalk 19247	1105235	PRJNA86769	86769	Terrabacteria group	Firmicutes	1.98496	35.2	-	ANFE01	27	2039	1928	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN02436186	GCA_000311065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/065/GCA_000311065.1_ASM31106v1	-	Gottschalk 19247
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03817	41.2	-	CEDK01	68	2019	1923	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233898	GCA_000944495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/495/GCA_000944495.1_Velvet_assembly	-	LS1U
Pseudomonas syringae	317	PRJEB17336	351495	Proteobacteria	Gammaproteobacteria	5.96908	59	-	FOPR01	38	5373	5129	10/31/16	3/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444062	GCA_900113535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/535/GCA_900113535.1_IMG-taxon_2687453722_annotated_assembly	-	BS3829
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.44809	38.3	-	FJLK01	33	3162	3020	2/20/16	3/28/17	Contig	SC	SAMEA2077992	GCA_900054435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/435/GCA_900054435.1_10625_3_84	-	2532STDY5467653
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.72902	50.7	-	CWUB01	415	5399	4542	7/17/15	2/24/17	Scaffold	SC	SAMEA3345050	GCA_001247645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/645/GCA_001247645.1_H14132053701	-	53701ss_1
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.42241	67.1	-	MUSF01	112	7957	7503	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001871	GCA_001994835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/835/GCA_001994835.1_ASM199483v1	-	VC6917
Burkholderia pseudomallei RF6BP15	1321255	PRJNA179436	179436	Proteobacteria	Betaproteobacteria	7.05815	68.2	-	ARZR01	221	7329	6735	11/18/15	3/27/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02044386	GCA_001445915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/915/GCA_001445915.1_ASM144591v1	26484663	RF6BP15
Vibrio cholerae CP1048(21)	991929	PRJNA63865	63865	Proteobacteria	Gammaproteobacteria	4.09199	47.5	-	ALDJ01	27	3934	3704	7/18/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00622022	GCA_000279395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/395/GCA_000279395.1_ASM27939v1	-	CP1048(21)
Clostridioides difficile P70	1151434	PRJNA86045	86045	Terrabacteria group	Firmicutes	4.04937	28.4	-	AVMU01	48	3747	3583	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766725	GCA_000452085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/085/GCA_000452085.2_ASM45208v2	-	P70
Vibrio parahaemolyticus S033	1394580	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.17183	45.2	-	AWMC01	477	5015	4770	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338894	GCA_000491515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/515/GCA_000491515.1_S033	-	S033
Klebsiella pneumoniae BWH 36	1328386	PRJNA201974	201974	Proteobacteria	Gammaproteobacteria	5.72455	57	-	JCNN01	10	5823	5557	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138599	GCA_000567565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/565/GCA_000567565.1_Kleb_pneu_BWH_36_V1	-	BWH 36
Enterococcus faecalis EnGen0282	1158663	PRJNA89053	89053	Terrabacteria group	Firmicutes	2.77535	37.7	-	AJEJ01	3	2784	2656	5/3/13	4/10/17	Scaffold	Broad Institute	SAMN00809223	GCA_000394995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/394/995/GCA_000394995.1_Ente_faec_T13_V1	-	T13
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14716	52.4	-	CHDY01	73	2513	2201	4/21/15	4/11/17	Contig	SC	SAMEA1690442	GCA_001355115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/115/GCA_001355115.1_8727_8_37	-	GCGS133
Enterococcus faecium EnGen0191	1157486	PRJNA88471	88471	Terrabacteria group	Firmicutes	2.97757	38.1	-	AITZ01	18	3110	2814	5/3/13	3/24/17	Scaffold	Broad Institute	SAMN00808916	GCA_000396805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/805/GCA_000396805.1_Ente_faec_HM1073_V1	-	HM1073
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.12832	41.2	-	CWEV01	75	2064	1889	6/24/15	3/26/17	Contig	SC	SAMEA1033040	GCA_001179465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/179/465/GCA_001179465.1_6903_8_59	-	EQUI0205
Ehrlichia chaffeensis str. Saint Vincent	1249655	PRJNA178995	178995	Proteobacteria	Alphaproteobacteria	1.17388	30.1	chromosome:NZ_CP007478.1/CP007478.1	-	1	941	883	4/17/14	4/2/17	Complete Genome	IGS	SAMN02364995	GCA_000632925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/925/GCA_000632925.1_ASM63292v1	-	Saint Vincent
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.00282	60.1	-	FCFE01	16	4741	4572	1/21/16	3/27/17	Scaffold	SC	SAMEA2274105	GCA_001538985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/985/GCA_001538985.1_12045_8_27	-	2880STDY5683036
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.70321	31.3	-	FBIX01	35	1784	1681	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683297	GCA_001487635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/635/GCA_001487635.1_CCN349	-	n/a
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96621	64.2	-	FVEB01	15	4907	4768	3/10/17	3/18/17	Contig	SC	SAMEA2068801	GCA_900132005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/005/GCA_900132005.1_10665_4_42	-	297
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.12806	67.4	-	LPLG01	111	6415	6072	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449640	GCA_001533525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/525/GCA_001533525.1_ASM153352v1	-	MSMB746WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.4132	54.9	-	LRJL01	107	5419	5153	1/22/16	3/27/17	Contig	JCVI	SAMN04431001	GCA_001525345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/345/GCA_001525345.1_ASM152534v1	-	SMART_1458
Pseudomonas sp. ENNP23	1535636	PRJNA322684	322684	Proteobacteria	Gammaproteobacteria	5.77217	66.3	-	LYSP01	125	5317	5133	9/15/16	4/13/17	Contig	Instituto de Ecologia	SAMN05172427	GCA_001728945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/945/GCA_001728945.1_ASM172894v1	-	ENNP23
Streptomyces sp. HNS054	1662446	PRJNA285716	285716	Terrabacteria group	Actinobacteria	7.45285	72.4	-	LDZX01	117	6766	6370	7/1/15	3/11/17	Contig	Xiamen University	SAMN03757723	GCA_001044185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/185/GCA_001044185.1_ASM104418v1	-	HNS054
Bacillus sp. bc15	1761758	PRJEB18368	355806	Terrabacteria group	Firmicutes	5.74273	34.9	-	FRBJ01	34	6105	5749	12/2/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487918	GCA_900142585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/142/585/GCA_900142585.1_IMG-taxon_2615840537_annotated_assembly	-	BC15
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.56171	49.8	-	FMDX01	67	3375	3323	8/16/16	8/16/16	Scaffold	SC	SAMEA3545340	GCA_900066575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/575/GCA_900066575.1_13470_2_93	-	-
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.46891	39.1	-	FMFV01	27	3247	3203	8/16/16	8/16/16	Scaffold	SC	SAMEA3545366	GCA_900066675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/675/GCA_900066675.1_14207_7_26	-	-
Bacillus sp. RU2C	1907304	PRJEB18860	360717	Terrabacteria group	Firmicutes	3.90396	37.9	-	FTML01	53	4026	3794	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05880580	GCA_900156115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/115/GCA_900156115.1_IMG-taxon_2708742419_annotated_assembly	-	RU2C
Streptomyces sp. Wb2n-11	1030533	PRJEB9168	284120	Terrabacteria group	Actinobacteria	8.2281	71	-	CVPB01	5	7542	6727	5/15/15	8/2/17	Contig	TUGRAZ	SAMEA3373827	GCA_001049855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/855/GCA_001049855.1_Wb2n-11_upgraded	-	Wb2n-11
Pseudomonas sp. CCA 1	1826671	PRJDB5092	339611	Proteobacteria	Gammaproteobacteria	6.99399	67.2	-	BDGS01	24	6121	5924	8/19/16	4/13/17	Contig	"Bioconversion Group, Research Institute for Sustainable Chemistry, Materials and Chemistry, National Institute of Advanced Industrial Science and Technology"	SAMD00057624	GCA_001748265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/265/GCA_001748265.1_ASM174826v1	-	CCA 1
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.3803	54.6	-	LRIW01	111	5413	5134	1/22/16	3/27/17	Contig	JCVI	SAMN04431016	GCA_001525365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/365/GCA_001525365.1_ASM152536v1	-	SMART_1168
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.11813	67.5	-	LPLH01	103	6415	6089	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449641	GCA_001533535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/535/GCA_001533535.1_ASM153353v1	-	MSMB747WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96673	64.2	-	FSBD01	16	4908	4767	12/14/16	3/21/17	Contig	SC	SAMEA2070659	GCA_900132015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/015/GCA_900132015.1_10665_4_44	-	299
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.80668	55.5	-	FJXJ01	40	4698	4503	4/5/16	3/28/17	Scaffold	SC	SAMEA2273322	GCA_900074965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/965/GCA_900074965.1_11983_6_2	-	e1284
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.6612	31.4	-	FAZR01	23	1724	1632	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683053	GCA_001487655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/655/GCA_001487655.1_EC3619	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.12834	59.9	-	FCLZ01	31	4855	4709	1/21/16	3/27/17	Scaffold	SC	SAMEA2273946	GCA_001539005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/005/GCA_001539005.1_12082_5_33	-	2880STDY5682873
Ehrlichia chaffeensis str. Wakulla	1249656	PRJNA178996	178996	Proteobacteria	Alphaproteobacteria	1.17436	30.1	chromosome:NZ_CP007479.1/CP007479.1	-	1	946	886	4/17/14	4/2/17	Complete Genome	IGS	SAMN02367298	GCA_000632945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/945/GCA_000632945.1_ASM63294v1	-	Wakulla
Streptococcus equi subsp. equi	148942	PRJNA300620	300620	Terrabacteria group	Firmicutes	2.107	41.3	-	LMTN01	90	2027	1840	1/8/16	3/27/17	Contig	University of Kentucky	SAMN04226682	GCA_001509635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/635/GCA_001509635.1_ASM150963v1	-	CF22
Enterococcus faecium EnGen0192	1157487	PRJNA88473	88473	Terrabacteria group	Firmicutes	3.12237	37.9	-	AITY01	38	3222	2922	5/3/13	3/24/17	Scaffold	Broad Institute	SAMN00808917	GCA_000396825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/825/GCA_000396825.1_Ente_faec_HM1072_V1	-	HM1072
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.13515	52.5	-	CHZJ01	81	2493	2187	4/21/15	4/11/17	Contig	SC	SAMEA1690451	GCA_001355135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/135/GCA_001355135.1_8289_2_90	-	GCGS090
Enterococcus faecalis ATCC 29200	525271	PRJNA89055	89055	Terrabacteria group	Firmicutes	3.01458	37.5	-	AJEK01	15	3075	2923	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809224	GCA_000395015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/015/GCA_000395015.1_Ente_faec_ATCC_29200_V1	-	ATCC 29200
Klebsiella pneumoniae BWH 22	1328383	PRJNA201966	201966	Proteobacteria	Gammaproteobacteria	5.55407	57.3	-	JCNO01	4	5588	5335	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138591	GCA_000567585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/585/GCA_000567585.1_Kleb_pneu_BWH_22_V2	-	BWH 22
Vibrio parahaemolyticus S032	1394579	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.11799	45.2	-	AWMD01	767	4910	4617	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338893	GCA_000491535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/535/GCA_000491535.1_S032	-	S032
Clostridioides difficile P72	1151435	PRJNA86047	86047	Terrabacteria group	Firmicutes	4.05742	28.5	-	AVMV01	44	3766	3635	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766727	GCA_000452105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/105/GCA_000452105.2_ASM45210v2	-	P72
Vibrio cholerae HC-20A2	991932	PRJNA63871	63871	Proteobacteria	Gammaproteobacteria	4.08454	47.5	-	ALDL01	27	3920	3712	7/18/12	3/23/17	Contig	Institute for Genome Sciences	SAMN02435820	GCA_000279415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/415/GCA_000279415.1_ASM27941v1	-	HC-20A2
Burkholderia pseudomallei NRF80Bp1	1321256	PRJNA179436	179436	Proteobacteria	Betaproteobacteria	6.74174	68.2	-	ARZS01	226	7017	6447	11/18/15	3/27/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02044387	GCA_001445925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/925/GCA_001445925.1_ASM144592v1	26484663	NRF80Bp1
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.22451	67	-	MURC01	197	7816	7366	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001839	GCA_001994855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/855/GCA_001994855.1_ASM199485v1	-	VC5300
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.44907	50.8	-	CXDP01	399	4739	4222	7/16/15	2/24/17	Scaffold	SC	SAMEA954805	GCA_001247735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/735/GCA_001247735.1_5236_8_1	-	Sh988743_441089
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54048	38.3	-	FJKP01	64	3237	3087	2/20/16	3/27/17	Contig	SC	SAMEA1965242	GCA_900054645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/645/GCA_900054645.1_10625_3_14	-	2532STDY5467583
Pseudomonas syringae	317	PRJEB17159	351371	Proteobacteria	Gammaproteobacteria	6.22717	58.8	-	FOVV01	75	5653	5338	10/31/16	3/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444065	GCA_900115275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/275/GCA_900115275.1_IMG-taxon_2687453695_annotated_assembly	-	BS0292
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.19496	40.9	-	CEIY01	66	2196	2047	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233986	GCA_000944535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/535/GCA_000944535.1_Velvet_assembly	-	S11M
Streptococcus agalactiae str. Gottschalk 13227	1105238	PRJNA86443	86443	Terrabacteria group	Firmicutes	2.12239	35.3	-	ANEZ01	45	2229	2102	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991144	GCA_000311085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/085/GCA_000311085.1_ASM31108v1	-	Gottschalk 13227
Acinetobacter baumannii AB_2007-09-110-01-7	1221252	PRJNA172663	172663	Proteobacteria	Gammaproteobacteria	3.96585	38.9	-	AMHH01	274	3802	3536	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471248	GCA_000301875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/875/GCA_000301875.1_ASM30187v1	-	AB_2007-09-110-01-7
Pseudomonas aeruginosa PA103	1081927	PRJNA232082	232082	Proteobacteria	Gammaproteobacteria	6.71131	66.2	-	JARI01	262	6601	6194	4/1/14	3/18/17	Scaffold	Northwestern University Feinberg School of Medicine	SAMN02951864	GCA_000611975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/975/GCA_000611975.2_PA103_1.0	-	PA103
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2840	996840	PRJNA63777	63777	Spirochaetes	Spirochaetia	4.54509	35	-	AFKS01	520	4134	3716	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254345	GCA_000216895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/895/GCA_000216895.2_CLC_glsol127	-	Fiocruz LV2840
Streptococcus pyogenes ABC020021452	1439033	PRJNA233241	233241	Terrabacteria group	Firmicutes	1.82987	38.5	-	JJKY01	2	1878	1756	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567590	GCA_000628725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/725/GCA_000628725.1_Stre_pyog_ABC020021452_V1	-	ABC020021452
Neisseria meningitidis M13265	1145162	PRJNA83537	83537	Proteobacteria	Betaproteobacteria	2.156	51.7	-	APTW01	137	2502	2138	5/1/13	3/21/17	Contig	IGS	SAMN01780112	GCA_000386845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/845/GCA_000386845.2_ASM38684v2	-	M13265
Helicobacter pylori NQ4044	992028	PRJNA64083	64083	Proteobacteria	delta/epsilon subdivisions	1.72852	38.7	-	AKNW01	17	1714	1521	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00777283	GCA_000274625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/625/GCA_000274625.1_ASM27462v1	-	NQ4044
Streptococcus pneumoniae GA58771	1105121	PRJNA75281	75281	Terrabacteria group	Firmicutes	2.09065	39.9	-	ALCM01	15	2274	2004	7/18/12	3/18/17	Contig	Institute for Genome Sciences	SAMN00773089	GCA_000279695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/695/GCA_000279695.1_ASM27969v1	-	GA58771
Ehrlichia chaffeensis str. West Paces	1249650	PRJNA178990	178990	Proteobacteria	Alphaproteobacteria	1.17094	30.1	chromosome:NZ_CP007480.1/CP007480.1	-	1	941	880	4/17/14	4/2/17	Complete Genome	IGS	SAMN02367293	GCA_000632965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/965/GCA_000632965.1_ASM63296v1	-	West Paces
Mycobacterium tuberculosis Kc 9614	1438826	PRJNA233399	233399	Terrabacteria group	Actinobacteria	4.37671	65.6	-	JKAG01	31	4273	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02567767	GCA_000649735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/735/GCA_000649735.1_Myco_bovi_Kc_9614_V1	-	Kc 9614
Bacillus cereus	1396	PRJNA331062	331062	Terrabacteria group	Firmicutes	6.03154	34.8	-	MCAX01	40	6331	5915	8/5/16	3/28/17	Contig	LaTrobe University	SAMN05436732	GCA_001699805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/805/GCA_001699805.1_ASM169980v1	-	LCR12
Staphylococcus epidermidis	1282	PRJNA319642	319642	Terrabacteria group	Firmicutes	2.71651	31.8	-	LYVW01	95	2802	2620	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN05187226	GCA_001659345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/345/GCA_001659345.1_ASM165934v1	-	ENVH150
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09473	37.9	-	JOYW01	23	3146	3043	7/15/14	2/26/17	Contig	Cornell University	SAMN02741531	GCA_000725955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/955/GCA_000725955.1_ASM72595v1	-	FSL R8-6305
Yersinia pestis CMCC84046	755942	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.51717	47.5	-	ADRG01	1137	4475	4018	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403055	GCA_000324405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/405/GCA_000324405.1_ASM32440v1	23271803	CMCC84046
Campylobacter jejuni 30286	1365655	PRJNA212341	212341	Proteobacteria	delta/epsilon subdivisions	1.64508	30.4	-	AUUH01	18	1713	1600	5/7/14	3/16/17	Contig	University of Exeter	SAMN02744568	GCA_000685605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/605/GCA_000685605.1_Assembly_1	24856088	30286
Ehrlichia chaffeensis str. Arkansas	205920	PRJNA325	325	Proteobacteria	Alphaproteobacteria	1.17625	30.1	chromosome:NC_007799.1/CP000236.1	-	1	952	892	2/21/06	3/29/17	Complete Genome	TIGR	SAMN02604010	GCA_000013145.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/145/GCA_000013145.1_ASM1314v1	16482227	Arkansas
Staphylococcus aureus M0200	1158514	PRJNA88937	88937	Terrabacteria group	Firmicutes	2.93203	33	-	AJCG01	13	3064	2889	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809165	GCA_000360365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/365/GCA_000360365.1_Stap_aure_M0200_V1	-	M0200
Staphylococcus aureus M0210	1224921	PRJNA173469	173469	Terrabacteria group	Firmicutes	2.87672	32.9	-	ANZL01	5	2978	2816	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN01125834	GCA_000360385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/385/GCA_000360385.1_Stap_aure_M0210_V1	-	M0210
Campylobacter jejuni	197	PRJNA350584	350584	Proteobacteria	delta/epsilon subdivisions	1.79985	30.0538	chromosome:NZ_CP017859.1/CP017859.1; plasmid pCJDM210L:NZ_CP017857.1/CP017857.1; plasmid pCJDM210S:NZ_CP017858.1/CP017858.1	-	3	1893	1736	11/7/16	3/20/17	Complete Genome	University of Tulsa	SAMN05942186	GCA_001870085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/085/GCA_001870085.1_ASM187008v1	-	YQ2210
Campylobacter jejuni	197	PRJNA261878	261878	Proteobacteria	delta/epsilon subdivisions	1.72153	30.5	-	JRLT01	14	1839	1645	9/29/14	4/17/17	Contig	Kingston Uniiversity	SAMN03077634	GCA_000759575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/575/GCA_000759575.1_G1.fsa	25688069	G1
Yersinia pestis CMCC87001	755943	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.51036	47.6	-	ADRH01	870	4261	4018	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403056	GCA_000324425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/425/GCA_000324425.1_ASM32442v1	23271803	CMCC87001
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.00138	37.8	-	JOWD01	24	3072	2982	7/15/14	2/26/17	Contig	Cornell University	SAMN02741458	GCA_000725985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/725/985/GCA_000725985.1_ASM72598v1	-	FSL F8-0081
Staphylococcus epidermidis	1282	PRJNA319644	319644	Terrabacteria group	Firmicutes	2.50268	32.1	-	LYVY01	53	2488	2348	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN05187229	GCA_001659355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/355/GCA_001659355.1_ASM165935v1	-	ENVL_287
Bacillus cereus	1396	PRJNA324744	324744	Terrabacteria group	Firmicutes	5.11191	35	-	LZPN01	228	5437	5165	9/16/16	3/28/17	Contig	"Australian Centre for Ecogenomics, The University of Queensland"	SAMN05225334	GCA_001729295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/295/GCA_001729295.1_ASM172929v1	-	A9
Mycobacterium tuberculosis MD17898	1447432	PRJNA234544	234544	Terrabacteria group	Actinobacteria	4.38522	65.6	-	JLGV01	84	4321	4108	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584583	GCA_000649755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/755/GCA_000649755.1_Myco_tube_MD17898_V1	-	MD17898
Clostridium beijerinckii	1520	PRJNA260606	260606	Terrabacteria group	Firmicutes	6.48539	30	chromosome:NZ_CP010086.2/CP010086.2	-	1	5723	5425	2/5/15	4/5/17	Complete Genome	University of Nottingham	SAMN03024437	GCA_000833105.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/105/GCA_000833105.2_ASM83310v2	-	NCIMB 14988
Streptococcus pneumoniae GA54354	1105115	PRJNA75269	75269	Terrabacteria group	Firmicutes	2.10091	39.7	-	ALCN01	8	2294	2034	7/18/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00773651	GCA_000279715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/715/GCA_000279715.1_ASM27971v1	-	GA54354
Helicobacter pylori CPY6311	992022	PRJNA64071	64071	Proteobacteria	delta/epsilon subdivisions	1.59116	38.7	-	AKNQ01	8	1591	1429	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00777266	GCA_000274645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/645/GCA_000274645.2_ASM27464v2	23661595	CPY6311
Neisseria meningitidis NM3147	1145163	PRJNA83539	83539	Proteobacteria	Betaproteobacteria	2.25145	52	-	APTX01	135	2608	2212	5/1/13	3/21/17	Contig	IGS	SAMN01780113	GCA_000386865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/865/GCA_000386865.2_ASM38686v2	-	NM3147
Streptococcus pyogenes ABC020041397	1439120	PRJNA233270	233270	Terrabacteria group	Firmicutes	1.82983	38.5	-	JJKZ01	2	1878	1754	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567619	GCA_000628745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/745/GCA_000628745.1_Stre_pyog_ABC020041397_V1	-	ABC020041397
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2832	996839	PRJNA63775	63775	Spirochaetes	Spirochaetia	4.54482	35	-	AFKR01	376	4087	3727	6/7/11	5/18/17	Scaffold	J. Craig Venter Institute	SAMN00254344	GCA_000216915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/915/GCA_000216915.2_CLC_glsol126	-	Fiocruz LV2832
Pseudomonas aeruginosa PA99	1437873	PRJNA232081	232081	Proteobacteria	Gammaproteobacteria	6.33423	66.2	-	JARJ01	132	6070	5810	4/1/14	3/18/17	Scaffold	Northwestern University Feinberg School of Medicine	SAMN02951865	GCA_000611995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/995/GCA_000611995.2_PA99_1.0	-	PA99
Acinetobacter baumannii AB_2007-16-27-01	1221254	PRJNA172665	172665	Proteobacteria	Gammaproteobacteria	3.97011	38.9	-	AMHJ01	71	3810	3663	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471276	GCA_000301895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/895/GCA_000301895.1_ASM30189v1	-	AB_2007-16-27-01
Streptococcus agalactiae FSL S3-105	1154782	PRJNA86155	86155	Terrabacteria group	Firmicutes	2.23675	35.7	-	ANCN01	89	2357	2144	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993313	GCA_000311105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/105/GCA_000311105.1_ASM31110v1	-	FSL S3-105
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.28187	41.2	-	CEHU01	148	2271	2145	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233952	GCA_000944615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/615/GCA_000944615.1_Velvet_assembly	-	LS8Q
Pseudomonas syringae pv. japonica str. M301072	629262	PRJNA33209	33209	Proteobacteria	Gammaproteobacteria	6.51632	58.5	-	AEAH01	3304	8834	8796	7/8/10	1/8/14	Scaffold	University of North Carolina at Chapel Hill	SAMN02471312	GCA_000145785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/785/GCA_000145785.1_ASM14578v1	21799664	M301072
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.53958	38.3	-	FJLB01	60	3238	3087	2/20/16	3/27/17	Contig	SC	SAMEA2080786	GCA_900054665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/665/GCA_900054665.1_10625_3_41	-	2532STDY5467610
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.65733	50.6	-	CWUC01	404	5334	4421	7/16/15	2/24/17	Scaffold	SC	SAMEA3345048	GCA_001247785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/785/GCA_001247785.1_H14144051401	-	51401ss_1
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	8.0146	67	-	MUVI01	184	7736	7291	2/10/17	4/10/17	Contig	University of British Columbia	SAMN05001968	GCA_001994875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/875/GCA_001994875.1_ASM199487v1	-	VC9459
Burkholderia pseudomallei MSHR465a	1321248	PRJNA179436	179436	Proteobacteria	Betaproteobacteria	7.00947	68.3	-	ARZF01	176	7294	6675	11/18/15	3/27/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02044376	GCA_001445955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/955/GCA_001445955.1_ASM144595v1	26484663	MSHR465a
Vibrio cholerae HC-43B1	991939	PRJNA63885	63885	Proteobacteria	Gammaproteobacteria	3.93183	47.7	-	ALDP01	20	3756	3509	7/18/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00619210	GCA_000279435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/435/GCA_000279435.1_ASM27943v1	-	HC-43B1
Clostridioides difficile P71	1151436	PRJNA86049	86049	Terrabacteria group	Firmicutes	4.13014	28.5	-	AVMW01	52	3827	3680	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766726	GCA_000452125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/125/GCA_000452125.2_ASM45212v2	-	P71
Vibrio parahaemolyticus S031	1394578	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	4.99352	45.3	-	AWME01	360	4781	4585	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338892	GCA_000491555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/555/GCA_000491555.1_S031	-	S031
Klebsiella pneumoniae BWH 15	1328382	PRJNA201965	201965	Proteobacteria	Gammaproteobacteria	5.51535	57.3	-	JCNP01	11	5491	5242	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138590	GCA_000567605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/605/GCA_000567605.1_Kleb_pneu_BWH_15_V2	-	BWH 15
Enterococcus faecalis EnGen0279	1158664	PRJNA89057	89057	Terrabacteria group	Firmicutes	2.8858	37.7	-	AJEL01	9	2937	2778	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809225	GCA_000395035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/035/GCA_000395035.1_Ente_faec_12107_V1	-	12107
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.1478	52.4	-	CFSG01	75	2524	2199	3/15/15	4/11/17	Contig	SC	SAMEA1690454	GCA_001355155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/155/GCA_001355155.1_8727_8_94	-	GCGS190
Enterococcus faecium EnGen0193	1157488	PRJNA88475	88475	Terrabacteria group	Firmicutes	2.92894	37.9	-	AIUV01	48	3043	2845	5/3/13	3/24/17	Scaffold	Broad Institute	SAMN00808918	GCA_000396845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/845/GCA_000396845.1_Ente_faec_UAA945_V1	-	UAA945
Streptococcus equi subsp. equi	148942	PRJNA300421	300421	Terrabacteria group	Firmicutes	2.12468	41.2	-	LMTX01	92	2045	1861	1/11/16	3/27/17	Contig	University of Kentucky	SAMN04221176	GCA_001510555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/555/GCA_001510555.1_ASM151055v1	-	8-Jan
Caldisphaera lagunensis DSM 15908	1056495	PRJNA70815	70815	TACK group	Crenarchaeota	1.54685	30	chromosome:NC_019791.1/CP003378.1	-	1	1558	1491	12/10/12	4/17/17	Complete Genome	JGI	SAMN02261426	GCA_000317795.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/795/GCA_000317795.1_ASM31779v1	-	DSM 15908
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.36932	59.7	-	FCGU01	16	5093	4924	1/21/16	3/27/17	Scaffold	SC	SAMEA2273891	GCA_001539025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/025/GCA_001539025.1_12082_2_27	-	2880STDY5682818
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.64712	31.4	-	FBFE01	18	1699	1616	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683196	GCA_001487675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/675/GCA_001487675.1_EC6049	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.93841	55.1	-	FJXT01	39	4910	4701	4/5/16	3/28/17	Scaffold	SC	SAMEA2273292	GCA_900074975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/975/GCA_900074975.1_11983_7_68	-	e1130
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.9299	64.2	-	FVEC01	11	4918	4772	3/10/17	3/18/17	Contig	SC	SAMEA2071370	GCA_900132025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/025/GCA_900132025.1_10665_4_46	-	301
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.27779	67.3	-	LPLI01	111	6596	6269	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449642	GCA_001533565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/565/GCA_001533565.1_ASM153356v1	-	MSMB748WGS
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.05552	54.8	-	LRJD01	90	4978	4746	1/22/16	3/27/17	Contig	JCVI	SAMN04431009	GCA_001525385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/385/GCA_001525385.1_ASM152538v1	-	SMART_1263
Pseudomonas sp. J237	1904754	PRJNA311243	311243	Proteobacteria	Gammaproteobacteria	5.23267	57.2	-	MKEP01	35	4981	4839	9/29/16	3/15/17	Contig	Memorial University of Newfoundland	SAMN04481024	GCA_001749735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/735/GCA_001749735.1_ASM174973v1	-	J237
Streptomyces sp. NRRL WC-3701	1519473	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.60005	71.9	-	LGCP01	310	8475	8031	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900602	GCA_001279025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/025/GCA_001279025.1_ASM127902v1	-	NRRL WC-3701
Bacillus sp. RUPDJ	1907305	PRJEB18903	360696	Terrabacteria group	Firmicutes	4.04492	46.3	-	FTNS01	20	4048	3863	1/14/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05880571	GCA_900156485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/485/GCA_900156485.1_IMG-taxon_2708743157_annotated_assembly	-	RUPDJ
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.14171	28.6	-	FMFU01	21	2900	2880	8/16/16	8/16/16	Scaffold	SC	SAMEA3545367	GCA_900066685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/685/GCA_900066685.1_14207_7_27	-	-
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	5.19378	47.9	-	FMFX01	132	4654	4591	8/16/16	8/16/16	Scaffold	SC	SAMEA3545378	GCA_900066735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/735/GCA_900066735.1_14207_7_38	-	-
Bacillus sp. V-88	1938744	PRJEB19764	377466	Terrabacteria group	Firmicutes	4.37454	43.8	-	FVZH01	63	4470	4313	3/11/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN06295884	GCA_900168275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/275/GCA_900168275.1_IMG-taxon_2708743150_annotated_assembly	-	V-88
Streptomyces sp. NRRL F-4711	1519476	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.95627	72.5	-	LGCX01	291	7130	6714	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900612	GCA_001279355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/355/GCA_001279355.1_ASM127935v1	-	NRRL F-4711
Pseudomonas sp. GTC 16473	1661060	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	6.22929	61.8	-	BCAQ01	227	5924	5614	10/4/16	4/13/17	Contig	National Institute of Technology and Evaluation	SAMD00031682	GCA_001753855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/855/GCA_001753855.1_ASM175385v1	-	GTC 16473
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.89829	55.2	-	LRIV01	81	4896	4664	1/22/16	3/27/17	Contig	JCVI	SAMN04431017	GCA_001525405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/405/GCA_001525405.1_ASM152540v1	-	SMART_1169
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.11714	67.5	-	LPLO01	94	6418	6095	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449648	GCA_001533625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/625/GCA_001533625.1_ASM153362v1	-	MSMB761WGS
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.90057	64.2	-	FVEF01	6	4906	4792	3/10/17	3/18/17	Contig	SC	SAMEA2068803	GCA_900132035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/035/GCA_900132035.1_10665_4_48	-	303
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.86113	55.4	-	FJXN01	40	4807	4592	4/5/16	3/28/17	Scaffold	SC	SAMEA2273317	GCA_900074985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/985/GCA_900074985.1_11983_7_93	-	e1251
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.63942	31.4	-	FBGV01	19	1686	1601	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683244	GCA_001487695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/695/GCA_001487695.1_CCN397	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.56785	58.7	-	FCJT01	147	5504	5210	1/21/16	3/27/17	Scaffold	SC	SAMEA2274007	GCA_001539045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/045/GCA_001539045.1_12082_3_36	-	2880STDY5682935
Methanococcus aeolicus Nankai-3	419665	PRJNA18641	18641	Euryarchaeota	Methanococci	1.5695	30	chromosome:NC_009635.1/CP000743.1	-	1	1551	1489	6/29/07	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00623051	GCA_000017185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/185/GCA_000017185.1_ASM1718v1	-	Nankai-3
Streptococcus equi subsp. equi	148942	PRJNA300422	300422	Terrabacteria group	Firmicutes	2.06548	41.2	-	LMTY01	72	1977	1819	1/11/16	3/27/17	Contig	University of Kentucky	SAMN04221177	GCA_001510635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/635/GCA_001510635.1_ASM151063v1	-	19
Enterococcus faecium EnGen0254	1158541	PRJNA88801	88801	Terrabacteria group	Firmicutes	3.0367	38	-	AIZR01	34	3046	2830	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809108	GCA_000396885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/885/GCA_000396885.1_Ente_faec_UAA947_V1	-	UAA947
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.09953	52.6	-	CIFS01	71	2469	2125	4/21/15	4/11/17	Contig	SC	SAMEA1690465	GCA_001355175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/175/GCA_001355175.1_8727_8_24	-	GCGS120
Enterococcus faecalis EnGen0304	1158665	PRJNA89059	89059	Terrabacteria group	Firmicutes	2.81699	37.7	-	AJEM01	3	2861	2721	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809226	GCA_000395055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/055/GCA_000395055.1_Ente_faec_SF24396_V1	-	SF24396
Klebsiella pneumoniae BWH 2	1328381	PRJNA201964	201964	Proteobacteria	Gammaproteobacteria	5.58374	56.9	-	JCNQ01	8	5618	5329	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138589	GCA_000567625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/625/GCA_000567625.1_Kleb_pneu_BWH_2_V2	-	BWH 2
Vibrio parahaemolyticus S030	1394577	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.09227	45.2	-	AWMF01	483	4893	4672	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338891	GCA_000491575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/575/GCA_000491575.1_S030	-	S030
Clostridioides difficile P73	1151437	PRJNA86051	86051	Terrabacteria group	Firmicutes	4.05693	28.4	-	AVMX01	50	3766	3610	8/20/13	3/13/17	Contig	Institute for Genome Sciences	SAMN01766728	GCA_000452145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/145/GCA_000452145.1_ASM45214v1	-	P73
Vibrio cholerae HC-46A1	991940	PRJNA63887	63887	Proteobacteria	Gammaproteobacteria	4.12098	47.5	-	ALDQ01	25	3966	3759	7/18/12	5/19/17	Contig	Institute for Genome Sciences	SAMN00621720	GCA_000279455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/455/GCA_000279455.1_ASM27945v1	-	HC-46A1
Burkholderia pseudomallei NAU14B6	1321249	PRJNA179436	179436	Proteobacteria	Betaproteobacteria	7.09573	68.2	-	ARZI01	196	7418	6776	11/18/15	3/27/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02044377	GCA_001445975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/975/GCA_001445975.1_ASM144597v1	26484663	NAU14B6
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.59211	67	-	MUVK01	213	7331	6757	2/10/17	3/29/17	Contig	University of British Columbia	SAMN05001972	GCA_001994895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/895/GCA_001994895.1_ASM199489v1	-	VC4896
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.71359	50.7	-	CXLE01	386	5248	4550	7/16/15	2/24/17	Scaffold	SC	SAMEA2164636	GCA_001247805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/805/GCA_001247805.1_8290_4_90	-	124357
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.39028	38.3	-	FJLA01	61	3077	2938	2/20/16	3/27/17	Contig	SC	SAMEA2077978	GCA_900054675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/675/GCA_900054675.1_10625_3_42	-	2532STDY5467611
Pseudomonas syringae pv. pisi str. 1704B	629263	PRJNA33211	33211	Proteobacteria	Gammaproteobacteria	6.67609	58.2	-	AEAI01	3544	9192	9160	7/8/10	1/8/14	Scaffold	University of North Carolina at Chapel Hill	SAMN02471313	GCA_000145805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/805/GCA_000145805.1_ASM14580v1	21799664	1704B
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.00955	41.4	-	CEGP01	115	1997	1846	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233943	GCA_000944715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/715/GCA_000944715.1_Velvet_assembly	-	LS7P
Streptococcus agalactiae FSL S3-442	1154799	PRJNA86189	86189	Terrabacteria group	Firmicutes	2.04535	35.3	-	ANCT01	124	2148	1978	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991079	GCA_000311125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/125/GCA_000311125.1_ASM31112v1	-	FSL S3-442
Acinetobacter baumannii AB_2008-15-34-7	1221255	PRJNA172666	172666	Proteobacteria	Gammaproteobacteria	3.91867	38.9	-	AMHK01	157	3809	3670	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471277	GCA_000301915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/915/GCA_000301915.1_ASM30191v1	-	AB_2008-15-34-7
Pseudomonas aeruginosa BWH036	1447544	PRJNA234700	234700	Proteobacteria	Gammaproteobacteria	6.73411	66.2	-	JIDY01	64	6517	6333	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02584702	GCA_000629025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/025/GCA_000629025.1_Pseu_aeru_BWH036_V1	-	BWH036
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2825	996838	PRJNA63773	63773	Spirochaetes	Spirochaetia	4.55135	35	-	AFKQ01	371	4071	3723	6/7/11	5/18/17	Scaffold	J. Craig Venter Institute	SAMN00254343	GCA_000216935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/935/GCA_000216935.2_CLC_glsol125	-	Fiocruz LV2825
Streptococcus pyogenes ABC020046589	1439149	PRJNA233276	233276	Terrabacteria group	Firmicutes	1.79808	38.5	-	JJLA01	5	1848	1733	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567625	GCA_000628765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/765/GCA_000628765.1_Stre_pyog_ABC020046589_V1	-	ABC020046589
Neisseria meningitidis 2001072	1145164	PRJNA83541	83541	Proteobacteria	Betaproteobacteria	2.15231	51.9	-	APTY01	130	2494	2155	5/1/13	3/21/17	Contig	IGS	SAMN01780114	GCA_000386885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/885/GCA_000386885.2_ASM38688v2	-	2001072
Helicobacter pylori CPY6271	992020	PRJNA64067	64067	Proteobacteria	delta/epsilon subdivisions	1.60212	38.8	-	AKNP01	8	1585	1428	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00777263	GCA_000274665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/665/GCA_000274665.1_ASM27466v1	23661595	CPY6271
Streptococcus pneumoniae GA56348	1105117	PRJNA75273	75273	Terrabacteria group	Firmicutes	2.14743	39.6	-	ALCO01	15	2364	2075	7/18/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00784009	GCA_000279735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/735/GCA_000279735.1_ASM27973v1	-	GA56348
Polaribacter sp. BM10	1529069	PRJNA362981	362981	FCB group	Bacteroidetes/Chlorobi group	3.2544	29.9	chromosome:NZ_CP019704.1/CP019704.1	-	1	2880	2765	2/22/17	2/24/17	Complete Genome	Kyung Hee University	SAMN06240834	GCA_002005425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/425/GCA_002005425.1_ASM200542v1	-	BM10
Mycobacterium tuberculosis MD17904	1447433	PRJNA234545	234545	Terrabacteria group	Actinobacteria	4.36209	65.5	-	JLGU01	100	4321	4121	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584584	GCA_000649775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/775/GCA_000649775.1_Myco_tube_MD17904_V1	-	MD17904
Bacillus cereus	1396	PRJNA324744	324744	Terrabacteria group	Firmicutes	5.37294	35	-	MAID01	231	5671	5323	9/16/16	3/28/17	Contig	"Australian Centre for Ecogenomics, The University of Queensland"	SAMN05231870	GCA_001729445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/445/GCA_001729445.1_ASM172944v1	-	A50
Staphylococcus epidermidis	1282	PRJNA319644	319644	Terrabacteria group	Firmicutes	2.54075	32	-	LYVZ01	78	2512	2352	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN05187230	GCA_001659395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/395/GCA_001659395.1_ASM165939v1	-	ENVL_370
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.00209	37.8	-	JOWE01	28	3065	2980	7/15/14	2/26/17	Contig	Cornell University	SAMN02741459	GCA_000726005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/005/GCA_000726005.1_ASM72600v1	-	FSL F8-0114
Yersinia pestis CMCC90027	755944	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.35899	47.8	-	ADRI01	1102	4200	3885	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403057	GCA_000324445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/445/GCA_000324445.1_ASM32444v1	23271803	CMCC90027
Campylobacter jejuni	197	PRJEB5964	248579	Proteobacteria	delta/epsilon subdivisions	1.65132	30.3	-	CCXG01	15	1735	1614	9/18/14	3/16/17	Contig	UH	SAMEA2422243	GCA_000821125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/125/GCA_000821125.1_CJJ5070	-	5070
Clostridium beijerinckii	1520	PRJNA322805	322805	Terrabacteria group	Firmicutes	6.12355	29.9	chromosome:NZ_CP016090.1/CP016090.1	-	1	5364	5111	2/17/17	4/6/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05170526	GCA_002003345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/003/345/GCA_002003345.1_ASM200334v1	-	BAS/B3/I/124
Staphylococcus aureus M0212	1158515	PRJNA88939	88939	Terrabacteria group	Firmicutes	2.89195	32.9	-	AJCH01	5	3031	2870	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809167	GCA_000360405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/405/GCA_000360405.1_Stap_aure_M0212_V1	-	M0212
Staphylococcus aureus M0213	1224922	PRJNA173470	173470	Terrabacteria group	Firmicutes	2.86646	32.9	-	ANZM01	4	2980	2828	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN01125835	GCA_000360425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/425/GCA_000360425.1_Stap_aure_M0213_V1	-	M0213
Clostridium pasteurianum DSM 525 = ATCC 6013	1262449	PRJNA299496	299496	Terrabacteria group	Firmicutes	4.35285	29.9	chromosome:NZ_CP013018.1/CP013018.1	-	1	4036	3827	10/31/16	4/5/17	Complete Genome	Papoutsakis Research Group	SAMN04208873	GCA_001856645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/645/GCA_001856645.1_ASM185664v1	-	ATCC 6013
Campylobacter jejuni subsp. jejuni	32022	PRJNA273796	273796	Proteobacteria	delta/epsilon subdivisions	1.74032	30.3	-	JXTR01	78	1845	1697	3/5/15	3/17/17	Contig	Laboratory of Food microbiology and Immunology	SAMN03296060	GCA_000948095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/095/GCA_000948095.1_ASM94809v1	25908133	C2-5524
Yersinia pestis CMCC91090	755945	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.41877	47.7	-	ADRJ01	987	4187	3889	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403058	GCA_000324465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/465/GCA_000324465.1_ASM32446v1	23271803	CMCC91090
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.06827	37.8	-	JOWH01	19	3148	3059	7/15/14	2/26/17	Contig	Cornell University	SAMN02741462	GCA_000726025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/025/GCA_000726025.1_ASM72602v1	-	FSL L4-0396
Staphylococcus epidermidis	1282	PRJNA319644	319644	Terrabacteria group	Firmicutes	2.44084	32	-	LYWA01	55	2416	2283	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN05187231	GCA_001659425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/425/GCA_001659425.1_ASM165942v1	-	ENVL_032
Bacillus cereus	1396	PRJNA325398	325398	Terrabacteria group	Firmicutes	5.49102	34.9	-	LZRB01	72	5722	5467	11/18/16	3/28/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05230499	GCA_001883865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/865/GCA_001883865.1_ASM188386v1	-	N31
Mycobacterium tuberculosis MD17902	1447434	PRJNA234546	234546	Terrabacteria group	Actinobacteria	4.42862	65.6	-	JLGT01	106	4363	4142	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584585	GCA_000649795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/795/GCA_000649795.1_Myco_tube_MD17902_V1	-	MD17902
Clostridium pasteurianum	1501	PRJNA299496	299496	Terrabacteria group	Firmicutes	4.35186	29.9	chromosome:NZ_CP013019.1/CP013019.1	-	1	4035	3825	10/31/16	4/5/17	Complete Genome	Papoutsakis Research Group	SAMN04208905	GCA_001856695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/695/GCA_001856695.1_ASM185669v1	-	M150B
Streptococcus pneumoniae GA56113	1105116	PRJNA75271	75271	Terrabacteria group	Firmicutes	2.15323	39.7	-	ALCP01	11	2380	2078	7/18/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00773653	GCA_000279755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/755/GCA_000279755.1_ASM27975v1	-	GA56113
Helicobacter pylori CPY6261	992019	PRJNA64065	64065	Proteobacteria	delta/epsilon subdivisions	1.609	38.8	-	AKNO01	5	1596	1423	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00777167	GCA_000274685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/685/GCA_000274685.1_ASM27468v1	23661595	CPY6261
Neisseria meningitidis 2001073	1145165	PRJNA83543	83543	Proteobacteria	Betaproteobacteria	2.1382	52	-	APTZ01	136	2467	2115	5/1/13	3/15/17	Contig	IGS	SAMN01780115	GCA_000386905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/905/GCA_000386905.2_ASM38690v2	-	2001073
Streptococcus pyogenes ABC020046688	1439150	PRJNA233277	233277	Terrabacteria group	Firmicutes	1.83119	38.5	-	JJLB01	2	1881	1755	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567626	GCA_000628785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/785/GCA_000628785.1_Stre_pyog_ABC020046688_V1	-	ABC020046688
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2812	996837	PRJNA63771	63771	Spirochaetes	Spirochaetia	4.55452	35	-	AFKP01	257	4054	3736	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254342	GCA_000216955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/955/GCA_000216955.2_CLC_glsol123	-	Fiocruz LV2812
Pseudomonas aeruginosa BWH035	1447543	PRJNA234699	234699	Proteobacteria	Gammaproteobacteria	6.968	66.1	-	JIDZ01	82	6718	6505	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02584701	GCA_000629045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/045/GCA_000629045.1_Pseu_aeru_BWH035_V1	-	BWH035
Acinetobacter baumannii AB_2008-15-52	1221257	PRJNA172668	172668	Proteobacteria	Gammaproteobacteria	3.88938	38.9	-	AMHM01	104	3703	3553	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471259	GCA_000301935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/935/GCA_000301935.1_ASM30193v1	-	AB_2008-15-52
Streptococcus agalactiae FSL S3-268	1154802	PRJNA86195	86195	Terrabacteria group	Firmicutes	2.05386	35.3	-	ANCV01	74	2167	1992	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991075	GCA_000311145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/145/GCA_000311145.1_ASM31114v1	-	FSL S3-268
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.19499	41	-	CECV01	178	2230	2063	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233877	GCA_000944755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/755/GCA_000944755.1_Velvet_assembly	-	LL-W
Pseudomonas syringae Cit 7	629264	PRJNA33213	33213	Proteobacteria	Gammaproteobacteria	6.17205	59.1	-	AEAJ01	1686	7184	7145	7/8/10	1/8/14	Scaffold	University of North Carolina at Chapel Hill	SAMN02471314	GCA_000145825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/825/GCA_000145825.1_ASM14582v1	21799664	Cit 7
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54133	38.3	-	FJLG01	61	3241	3092	2/20/16	3/27/17	Contig	SC	SAMEA2080789	GCA_900054685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/685/GCA_900054685.1_10625_3_50	-	2532STDY5467619
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.76543	50.7	-	CWWB01	394	5397	4540	7/16/15	2/24/17	Scaffold	SC	SAMEA3345095	GCA_001247865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/865/GCA_001247865.1_Sg_201403955_CACCGG_L001	-	201403955_1
Burkholderia cenocepacia	95486	PRJNA289138	289138	Proteobacteria	Betaproteobacteria	7.98849	67.1	-	MUVX01	330	7795	7238	2/10/17	4/2/17	Contig	University of British Columbia	SAMN05001986	GCA_001994915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/915/GCA_001994915.1_ASM199491v1	-	VC6589
Burkholderia pseudomallei NAU20B16	1321250	PRJNA179436	179436	Proteobacteria	Betaproteobacteria	7.20026	68.1	-	ARZJ01	235	7514	6836	11/18/15	3/27/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02044378	GCA_001445985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/985/GCA_001445985.1_ASM144598v1	26484663	NAU20B16
Vibrio cholerae CP1046(19)	991928	PRJNA63863	63863	Proteobacteria	Gammaproteobacteria	4.0935	47.5	-	ALDH01	25	3992	3764	7/18/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00622035	GCA_000281655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/655/GCA_000281655.1_ASM28165v1	-	CP1046(19)
Clostridioides difficile P74	1151438	PRJNA86053	86053	Terrabacteria group	Firmicutes	4.1609	28.5	-	AVMY01	40	3875	3704	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766729	GCA_000452165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/165/GCA_000452165.2_ASM45216v2	-	P74
Vibrio parahaemolyticus S029	1394576	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	4.97435	45.5	-	AWMG01	594	4743	4484	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338890	GCA_000491595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/595/GCA_000491595.1_S029	-	S029
Klebsiella pneumoniae MGH 47	1328379	PRJNA201962	201962	Proteobacteria	Gammaproteobacteria	5.59865	57.2	-	JCNR01	5	5637	5345	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138587	GCA_000567645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/645/GCA_000567645.1_Kleb_pneu_MGH_47_V1	-	MGH 47
Enterococcus faecalis EnGen0281	1158666	PRJNA89061	89061	Terrabacteria group	Firmicutes	2.95549	37.6	-	AJEN01	4	3041	2881	5/3/13	3/24/17	Scaffold	Broad Institute	SAMN00809227	GCA_000395075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/075/GCA_000395075.1_Ente_faec_Pan7_V1	-	Pan7
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14201	52.4	-	CGDD01	70	2511	2182	3/15/15	4/11/17	Contig	SC	SAMEA1690466	GCA_001355195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/195/GCA_001355195.1_8727_8_72	-	GCGS168
Enterococcus faecium EnGen0255	1158543	PRJNA88805	88805	Terrabacteria group	Firmicutes	2.82651	38	-	AIZT01	28	2873	2699	5/3/13	3/24/17	Scaffold	Broad Institute	SAMN00809130	GCA_000396925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/925/GCA_000396925.1_Ente_faec_UAA951_V1	-	UAA951
Streptococcus equi subsp. equi	148942	PRJNA300418	300418	Terrabacteria group	Firmicutes	2.07673	41.2	-	LTDT01	73	2018	1847	5/17/16	3/28/17	Contig	University of Kentucky	SAMN04516925	GCA_001645285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/285/GCA_001645285.1_ASM164528v1	-	E12
Campylobacter subantarcticus LMG 24374	1388751	PRJNA215649	215649	Proteobacteria	delta/epsilon subdivisions	1.78254	29.9	chromosome:NZ_CP007772.1/CP007772.1	-	1	1804	1683	1/7/15	4/10/17	Complete Genome	"USDA, ARS"	SAMN03248548	GCA_000816265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/265/GCA_000816265.1_ASM81626v1	25381664	LMG 24374
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.1021	60	-	FCMR01	14	4821	4685	1/21/16	3/27/17	Scaffold	SC	SAMEA2274060	GCA_001539065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/065/GCA_001539065.1_12082_5_48	-	2880STDY5682988
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.71687	31.2	-	FBLF01	43	1760	1643	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683357	GCA_001487715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/715/GCA_001487715.1_p568C	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.93096	55.4	-	FJWG01	25	4815	4596	4/5/16	3/28/17	Scaffold	SC	SAMEA2273321	GCA_900074995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/995/GCA_900074995.1_11983_6_1	-	e1269
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.91297	64.3	-	FVEE01	21	4865	4729	3/10/17	3/18/17	Contig	SC	SAMEA1969449	GCA_900132045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/045/GCA_900132045.1_10665_4_49	-	304
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.245	67.3	-	LPLP01	111	6561	6240	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449649	GCA_001533655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/655/GCA_001533655.1_ASM153365v1	-	MSMB764WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.9795	55.3	-	LRJG01	82	4920	4662	1/22/16	3/27/17	Contig	JCVI	SAMN04431006	GCA_001525425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/425/GCA_001525425.1_ASM152542v1	-	SMART_1411
Pseudomonas sp. GTC 16481	1661061	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	5.4344	62.5	-	BCAR01	190	5153	4919	10/4/16	4/13/17	Contig	National Institute of Technology and Evaluation	SAMD00031683	GCA_001753875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/875/GCA_001753875.1_ASM175387v1	-	GTC 16481
Streptomyces sp. NRRL F-5755	1519475	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.27391	72	-	LGCW01	327	8106	7633	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900611	GCA_001279365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/365/GCA_001279365.1_ASM127936v1	-	NRRL F-5755
Bacillus sp. RUTrin4	1907306	PRJEB19760	377462	Terrabacteria group	Firmicutes	5.42238	35.1	-	FVZK01	17	5774	5449	3/11/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05880553	GCA_900168355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/355/GCA_900168355.1_IMG-taxon_2710724122_annotated_assembly	-	RUTrin4
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	5.88014	48.7	-	FMGB01	121	5084	5026	8/16/16	8/16/16	Scaffold	SC	SAMEA3545382	GCA_900066755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/755/GCA_900066755.1_14207_7_42	-	-
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.71461	43.6	-	FMGA01	66	3545	3488	8/16/16	8/16/16	Scaffold	SC	SAMEA3545383	GCA_900066765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/765/GCA_900066765.1_14207_7_43	-	-
Bacillus sp. CC120222-01	1378089	PRJEB20425	382911	Terrabacteria group	Firmicutes	4.07191	43.5	-	FWZZ01	19	4353	4132	4/19/17	4/22/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02744787	GCA_900177305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/305/GCA_900177305.1_IMG-taxon_2547132509_annotated_assembly	-	CC120222-01
Streptomyces sp. NRRL F-2295	1519477	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.84433	72.7	-	LGCY01	170	6771	6445	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900613	GCA_001279425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/425/GCA_001279425.1_ASM127942v1	-	NRRL F-2295
Pseudomonas sp. NBRC 111120	1661035	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	5.5315	62.4	-	BCAW01	244	5225	5010	10/4/16	4/13/17	Contig	National Institute of Technology and Evaluation	SAMD00031655	GCA_001753895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/895/GCA_001753895.1_ASM175389v1	-	NBRC 111120
Enterobacter hormaechei	158836	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.07685	54.9	-	LRIY01	74	5066	4780	1/22/16	3/27/17	Contig	JCVI	SAMN04431014	GCA_001525445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/445/GCA_001525445.1_ASM152544v1	-	SMART_1259
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.99321	66.8	-	LPLS01	175	7361	6888	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449652	GCA_001533685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/685/GCA_001533685.1_ASM153368v1	-	MSMB778WGS
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.90865	64.1	-	FVEH01	13	4914	4789	3/10/17	3/18/17	Contig	SC	SAMEA2068804	GCA_900132065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/065/GCA_900132065.1_10665_4_51	-	306
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.78755	55.5	-	FJXC01	41	4699	4469	4/5/16	3/28/17	Scaffold	SC	SAMEA2273300	GCA_900075005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/005/GCA_900075005.1_11983_7_76	-	e1109
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65774	31.4	-	FBMP01	21	1716	1628	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683391	GCA_001487735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/735/GCA_001487735.1_CCN26	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.24335	59.8	-	FCIU01	22	4961	4803	1/21/16	3/27/17	Scaffold	SC	SAMEA2273977	GCA_001539085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/085/GCA_001539085.1_12082_3_12	-	2880STDY5682904
Campylobacter lari CCUG 22395	1388750	PRJNA215648	215648	Proteobacteria	delta/epsilon subdivisions	1.52303	29.9	chromosome:NZ_CP007776.2/CP007776.2	-	1	1555	1479	1/7/15	4/5/17	Complete Genome	"USDA, ARS"	SAMN03248543	GCA_000816385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/385/GCA_000816385.2_ASM81638v2	25381664	CCUG 22395
Streptococcus equi subsp. equi	148942	PRJNA300418	300418	Terrabacteria group	Firmicutes	2.05735	41.2	-	LTDU01	75	1959	1816	5/17/16	3/28/17	Contig	University of Kentucky	SAMN04517128	GCA_001645295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/295/GCA_001645295.1_ASM164529v1	-	-
Enterococcus faecium EnGen0256	1158544	PRJNA88807	88807	Terrabacteria group	Firmicutes	3.19877	37.9	-	AIZU01	36	3283	3047	5/3/13	3/24/17	Scaffold	Broad Institute	SAMN00809141	GCA_000396945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/945/GCA_000396945.1_Ente_faec_UAA952_V1	-	UAA952
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.13837	52.4	-	CHDZ01	77	2491	2178	4/21/15	4/11/17	Contig	SC	SAMEA1690469	GCA_001355215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/215/GCA_001355215.1_8289_2_3	-	GCGS003
Enterococcus faecalis EnGen0287	1158667	PRJNA89063	89063	Terrabacteria group	Firmicutes	3.03033	37.3	-	AJEO01	5	3079	2919	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809228	GCA_000395095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/095/GCA_000395095.1_Ente_faec_YI6-1_V1	-	YI6-1
Klebsiella pneumoniae MGH 45	1328377	PRJNA201960	201960	Proteobacteria	Gammaproteobacteria	5.59425	57.2	-	JCNS01	4	5597	5345	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138585	GCA_000567665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/665/GCA_000567665.1_Kleb_pneu_MGH_45_V1	-	MGH 45
Vibrio parahaemolyticus S028	1394575	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.07423	45.3	-	AWMH01	443	4876	4661	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338889	GCA_000491615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/615/GCA_000491615.1_S028	-	S028
Clostridioides difficile P75	1151439	PRJNA86055	86055	Terrabacteria group	Firmicutes	4.05059	28.4	-	AVMZ01	54	3757	3572	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766730	GCA_000452185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/185/GCA_000452185.2_ASM45218v2	-	P75
Vibrio cholerae VC35	1225781	PRJNA173392	173392	Proteobacteria	Gammaproteobacteria	3.91271	47.6	-	AMBR01	103	3620	3494	9/27/12	3/27/17	Contig	Institute of Biological Science	SAMN02469953	GCA_000299495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/495/GCA_000299495.2_VC35.1	23209200	VC35
Burkholderia pseudomallei NAU24B3	1321251	PRJNA179436	179436	Proteobacteria	Betaproteobacteria	7.09154	68.1	-	ARZK01	245	7436	6752	11/18/15	3/27/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02044379	GCA_001446005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/005/GCA_001446005.1_ASM144600v1	26484663	NAU24B3
Burkholderia cenocepacia	95486	PRJNA275519	275519	Proteobacteria	Betaproteobacteria	8.666	66.4	-	JYMX01	177	8230	7825	3/23/17	4/26/17	Contig	CSIR-Institute of Microbial Technology	SAMN03349520	GCA_002071875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/071/875/GCA_002071875.1_ASM207187v1	28428775	BC-19
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.50104	50.8	-	CXAJ01	373	4938	4278	7/16/15	2/24/17	Scaffold	SC	SAMEA2445770	GCA_001247905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/905/GCA_001247905.1_12971_8_78	-	H140100101
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.5587	38.3	-	FJMN01	36	3275	3141	2/20/16	3/27/17	Contig	SC	SAMEA2077990	GCA_900054695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/695/GCA_900054695.1_10625_3_78	-	2532STDY5467647
Pseudomonas syringae pv. aptata str. DSM 50252	629268	PRJNA33221	33221	Proteobacteria	Gammaproteobacteria	6.36468	58.7	-	AEAN01	2562	6402	6368	7/8/10	1/8/14	Scaffold	University of North Carolina at Chapel Hill	SAMN02471325	GCA_000145905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/905/GCA_000145905.1_ASM14590v1	21799664	DSM 50252
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.02577	41.2	-	CEGQ01	65	2009	1920	2/18/15	3/17/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233944	GCA_000944895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/895/GCA_000944895.1_Velvet_assembly	-	LS7S
Streptococcus agalactiae CCUG 91	1105252	PRJNA86205	86205	Terrabacteria group	Firmicutes	2.1329	35.3	-	ANCY01	25	2215	2113	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991074	GCA_000311165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/165/GCA_000311165.1_ASM31116v1	-	CCUG 91
Acinetobacter baumannii AB_2008-15-70	1221259	PRJNA172670	172670	Proteobacteria	Gammaproteobacteria	4.10191	39	-	AMHO01	234	4040	3852	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471250	GCA_000301955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/955/GCA_000301955.1_ASM30195v1	-	AB_2008-15-70
Pseudomonas aeruginosa BWH033	1447541	PRJNA234697	234697	Proteobacteria	Gammaproteobacteria	6.72353	66	-	JIEA01	82	6431	6220	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02584699	GCA_000629065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/065/GCA_000629065.1_Pseu_aeru_BWH033_V1	-	BWH033
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2811	996836	PRJNA63769	63769	Spirochaetes	Spirochaetia	4.55172	35	-	AFKO01	286	4051	3736	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254341	GCA_000216975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/975/GCA_000216975.2_CLC_glsol122	-	Fiocruz LV2811
Streptococcus pyogenes ABC020046986	1439151	PRJNA233278	233278	Terrabacteria group	Firmicutes	1.82989	38.5	-	JJLC01	2	1878	1754	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567627	GCA_000628805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/805/GCA_000628805.1_Stre_pyog_ABC020046986_V1	-	ABC020046986
Neisseria meningitidis 2000081	1145166	PRJNA83545	83545	Proteobacteria	Betaproteobacteria	2.17448	51.9	-	APUA01	139	2509	2167	5/1/13	3/21/17	Contig	IGS	SAMN01780116	GCA_000386925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/925/GCA_000386925.2_ASM38692v2	-	2000081
Helicobacter pylori CPY6081	992018	PRJNA64063	64063	Proteobacteria	delta/epsilon subdivisions	1.5991	38.7	-	AKNN01	9	1598	1403	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00777164	GCA_000274705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/705/GCA_000274705.1_ASM27470v1	23661595	CPY6081
Streptococcus pneumoniae GA58581	1105118	PRJNA75275	75275	Terrabacteria group	Firmicutes	2.12413	39.6	-	ALCQ01	14	2298	2004	7/18/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00773090	GCA_000279775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/775/GCA_000279775.1_ASM27977v1	-	GA58581
Campylobacter lari RM16701	1453989	PRJNA236387	236387	Proteobacteria	delta/epsilon subdivisions	1.51646	29.9	chromosome:NZ_CP007777.1/CP007777.1	-	1	1542	1472	1/7/15	4/2/17	Complete Genome	"USDA, ARS"	SAMN03248545	GCA_000816405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/405/GCA_000816405.1_ASM81640v1	25381664	RM16701
Mycobacterium tuberculosis MD16555	1447437	PRJNA234549	234549	Terrabacteria group	Actinobacteria	4.38509	65.6	-	JLGQ01	87	4321	4098	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584588	GCA_000649815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/815/GCA_000649815.1_Myco_tube_MD16555_V1	-	MD16555
Bacillus cereus	1396	PRJNA325395	325395	Terrabacteria group	Firmicutes	5.77939	35	-	LZQY01	138	6179	5896	11/18/16	3/28/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05230476	GCA_001883965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/965/GCA_001883965.1_ASM188396v1	-	A8S3
Staphylococcus epidermidis	1282	PRJNA319645	319645	Terrabacteria group	Firmicutes	2.39967	32.2	-	LYWF01	43	2411	2283	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN05194378	GCA_001659475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/475/GCA_001659475.1_ASM165947v1	-	M25
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.12478	37.9	-	JOWF01	24	3187	3080	7/15/14	2/26/17	Contig	Cornell University	SAMN02741460	GCA_000726045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/045/GCA_000726045.1_ASM72604v1	-	FSL H5-0793
Yersinia pestis CMCC92004	755946	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.26483	47.9	-	ADRK01	1461	4090	3729	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403059	GCA_000324485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/485/GCA_000324485.1_ASM32448v1	23271803	CMCC92004
Campylobacter jejuni subsp. jejuni	32022	PRJNA273814	273814	Proteobacteria	delta/epsilon subdivisions	1.65695	30.6	-	JXTS01	69	1712	1572	3/5/15	3/17/17	Contig	Laboratory of Food microbiology and Immunology	SAMN03299121	GCA_000948105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/105/GCA_000948105.1_ASM94810v1	25908133	P9-2209
Clostridium pasteurianum DSM 525 = ATCC 6013	1262449	PRJNA258199	258199	Terrabacteria group	Firmicutes	4.3521	29.9	chromosome:NZ_CP009268.1/CP009268.1	-	1	4034	3819	12/23/14	4/2/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02990135	GCA_000807255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/255/GCA_000807255.1_ASM80725v1	25700415	DSM 525
Staphylococcus aureus M0216	1158516	PRJNA88941	88941	Terrabacteria group	Firmicutes	2.88395	33	-	AJCI01	4	2994	2826	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809168	GCA_000360445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/445/GCA_000360445.1_Stap_aure_M0216_V1	-	M0216
Staphylococcus aureus M0221	1157016	PRJNA88589	88589	Terrabacteria group	Firmicutes	2.92558	32.8	-	AIWC01	5	3086	2921	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792141	GCA_000360465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/465/GCA_000360465.1_Stap_aure_M0221_V1	-	M0221
Clostridium pasteurianum DSM 525 = ATCC 6013	1262449	PRJNA258202	258202	Terrabacteria group	Firmicutes	4.35189	29.9	chromosome:NZ_CP009267.1/CP009267.1	-	1	4034	3819	12/23/14	4/2/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02990137	GCA_000807175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/175/GCA_000807175.1_ASM80717v1	25700419	ATCC 6013
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.61311	30.4	-	CUTT01	8	1696	1586	3/31/15	3/18/17	Contig	SC	SAMEA1401531	GCA_001223585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/585/GCA_001223585.1_7213_3_36	-	OXC6579
Yersinia pestis CMCC92010	755947	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.38495	47.6	-	ADRL01	1216	4260	3882	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403060	GCA_000324505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/505/GCA_000324505.1_ASM32450v1	23271803	CMCC92010
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.10772	37.9	-	JOWI01	28	3163	3075	7/15/14	2/26/17	Contig	Cornell University	SAMN02741463	GCA_000726065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/065/GCA_000726065.1_ASM72606v1	-	FSL L4-0404
Staphylococcus epidermidis	1282	PRJNA319645	319645	Terrabacteria group	Firmicutes	2.40112	32	-	LYWE01	33	2389	2264	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN05194377	GCA_001659505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/505/GCA_001659505.1_ASM165950v1	-	M01
Bacillus cereus	1396	PRJNA325397	325397	Terrabacteria group	Firmicutes	5.60578	34.9	-	LZQZ01	100	5872	5601	11/18/16	3/28/17	Contig	"The Third Institute of Oceanography, Key Laboratory of Marine Biogenetic Resources"	SAMN05230498	GCA_001883975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/883/975/GCA_001883975.1_ASM188397v1	-	Co15
Mycobacterium tuberculosis MD18478	1447438	PRJNA234551	234551	Terrabacteria group	Actinobacteria	4.4211	65.6	-	JLGP01	96	4346	4132	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584589	GCA_000649835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/835/GCA_000649835.1_Myco_tube_MD18478_V1	-	MD18478
Clostridium beijerinckii ATCC 35702	864803	PRJNA207367	207367	Terrabacteria group	Firmicutes	5.99905	29.9	chromosome:NZ_CP006777.1/CP006777.1	-	1	5280	5029	10/22/14	4/2/17	Complete Genome	NCSU	SAMN03120854	GCA_000767745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/745/GCA_000767745.1_ASM76774v1	25523769	SA-1
Streptococcus pneumoniae GA60080	1105119	PRJNA75277	75277	Terrabacteria group	Firmicutes	2.10308	39.7	-	ALCR01	26	2335	2052	7/18/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00773091	GCA_000279815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/815/GCA_000279815.1_ASM27981v1	-	GA60080
Helicobacter pylori CPY3281	992017	PRJNA64061	64061	Proteobacteria	delta/epsilon subdivisions	1.60653	38.7	-	AKNM01	8	1613	1408	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00777162	GCA_000274725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/725/GCA_000274725.1_ASM27472v1	23661595	CPY3281
Neisseria meningitidis 2001001	1145167	PRJNA83547	83547	Proteobacteria	Betaproteobacteria	2.19368	51.9	-	APUB01	136	2503	2143	5/1/13	3/21/17	Contig	IGS	SAMN01780117	GCA_000386945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/945/GCA_000386945.2_ASM38694v2	-	2001001
Streptococcus pyogenes ABC020047328	1439157	PRJNA233279	233279	Terrabacteria group	Firmicutes	1.8556	38.6	-	JJLD01	2	1916	1797	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567628	GCA_000628825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/825/GCA_000628825.1_Stre_pyog_ABC020047328_V1	-	ABC020047328
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2806	996835	PRJNA63767	63767	Spirochaetes	Spirochaetia	4.54416	35	-	AFKN01	418	4094	3718	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254338	GCA_000216995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/995/GCA_000216995.2_CLC_glsol120	-	Fiocruz LV2806
Pseudomonas aeruginosa BWH032	1447540	PRJNA234696	234696	Proteobacteria	Gammaproteobacteria	6.56497	66.3	-	JIEB01	57	6232	6053	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02584698	GCA_000629085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/085/GCA_000629085.1_Pseu_aeru_BWH032_V1	-	BWH032
Acinetobacter baumannii AB_2008-23-01-01-7	1221261	PRJNA172672	172672	Proteobacteria	Gammaproteobacteria	4.03216	39.3	-	AMHQ01	116	3913	3764	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471226	GCA_000301975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/975/GCA_000301975.1_ASM30197v1	-	AB_2008-23-01-01-7
Streptococcus agalactiae CCUG 17336	1105253	PRJNA86207	86207	Terrabacteria group	Firmicutes	2.04417	35.4	-	ANCZ01	35	2130	1989	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991066	GCA_000311185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/185/GCA_000311185.1_ASM31118v1	-	CCUG 17336
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.06336	41.1	-	CEJX01	72	2056	1955	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234007	GCA_000945015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/015/GCA_000945015.1_Velvet_assembly	-	S13H
Pseudomonas syringae pv. syringae FF5	591153	PRJNA33695	33695	Proteobacteria	Gammaproteobacteria	6.03229	57.8	-	ACXZ01	79	6604	6528	8/25/09	7/22/14	Scaffold	The Sainsbury Laboratory	SAMN00002873	GCA_000163315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/315/GCA_000163315.1_ASM16331v1	22740663	FF5
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.41397	38.3	-	FJGY01	29	3121	3015	2/20/16	3/27/17	Contig	SC	SAMEA2077493	GCA_900055195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/195/GCA_900055195.1_10625_2_27	-	2532STDY5467500
Shigella sonnei	624	PRJEB2460	204320	Proteobacteria	Gammaproteobacteria	4.51106	50.8	-	CXFV01	377	4880	4327	7/17/15	2/24/17	Scaffold	SC	SAMEA1027722	GCA_001247925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/925/GCA_001247925.1_6350_1_5	-	sh03-1223
Burkholderia cenocepacia	95486	PRJNA275521	275521	Proteobacteria	Betaproteobacteria	8.66824	66.4	-	JYMZ01	187	8233	7826	3/23/17	4/26/17	Contig	CSIR-Institute of Microbial Technology	SAMN03349522	GCA_002071885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/071/885/GCA_002071885.1_ASM207188v1	28428775	BC-40
Burkholderia pseudomallei NAU44A6	1321252	PRJNA179436	179436	Proteobacteria	Betaproteobacteria	7.17615	68.1	-	ARZL01	203	7509	6854	11/18/15	3/27/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02044380	GCA_001446035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/035/GCA_001446035.1_ASM144603v1	26484663	NAU44A6
Vibrio cholerae VC1761	1225783	PRJNA173394	173394	Proteobacteria	Gammaproteobacteria	4.01146	47.5	-	AMBS01	149	3785	3649	9/27/12	3/27/17	Contig	Institute of Biological Science	SAMN02469952	GCA_000299515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/515/GCA_000299515.2_VC1761.1	-	VC1761
Clostridioides difficile P77	1151440	PRJNA86057	86057	Terrabacteria group	Firmicutes	4.15587	28.6	-	AVNA01	61	3902	3682	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766731	GCA_000452205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/205/GCA_000452205.2_ASM45220v2	-	P77
Vibrio parahaemolyticus S027	1394574	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.11378	45.2	-	AWMI01	467	4832	4592	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338888	GCA_000491635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/635/GCA_000491635.1_S027	-	S027
Klebsiella pneumoniae MGH 43	1328375	PRJNA201958	201958	Proteobacteria	Gammaproteobacteria	5.44712	57.3	-	JCNT01	1	5379	5115	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138583	GCA_000567685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/685/GCA_000567685.1_Kleb_pneu_MGH_43_V1	-	MGH 43
Enterococcus faecalis EnGen0300	1158668	PRJNA89065	89065	Terrabacteria group	Firmicutes	3.26233	37.1	-	AJEP01	53	3430	3231	5/3/13	4/10/17	Scaffold	Broad Institute	SAMN00809229	GCA_000395115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/115/GCA_000395115.1_Ente_faec_SF21521_V1	-	SF21521
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.17516	52.4	-	CFLE01	78	2539	2210	3/15/15	4/11/17	Contig	SC	SAMEA1690471	GCA_001355235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/235/GCA_001355235.1_8289_2_72	-	GCGS072
Enterococcus faecium EnGen0257	1158545	PRJNA88809	88809	Terrabacteria group	Firmicutes	2.92766	38	-	AIZV01	17	2982	2778	5/3/13	3/24/17	Scaffold	Broad Institute	SAMN00809143	GCA_000396965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/965/GCA_000396965.1_Ente_faec_UAA1007_V1	-	UAA1007
Streptococcus equi subsp. equi	148942	PRJNA300418	300418	Terrabacteria group	Firmicutes	2.06013	41.2	-	LTDS01	72	1965	1822	5/17/16	3/28/17	Contig	University of Kentucky	SAMN04516924	GCA_001645305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/305/GCA_001645305.1_ASM164530v1	-	F43
Clostridium beijerinckii NCIMB 8052	290402	PRJNA12637	12637	Terrabacteria group	Firmicutes	6.00063	29.9	chromosome:NC_009617.1/CP000721.1	-	1	5292	5037	6/27/07	5/18/17	Complete Genome	US DOE Joint Genome Institute	SAMN02598276	GCA_000016965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/016/965/GCA_000016965.1_ASM1696v1	"2,196,212,622,433,310"	NCIMB 8052
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.14507	60	-	FCMW01	31	4856	4709	1/21/16	3/27/17	Scaffold	SC	SAMEA2274085	GCA_001539105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/105/GCA_001539105.1_12045_8_10	-	2880STDY5683015
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.77544	31.2	-	FBEL01	37	1877	1763	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683177	GCA_001487755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/755/GCA_001487755.1_SS_2278	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.15334	54.6	-	FJWZ01	69	5172	4909	4/5/16	3/28/17	Scaffold	SC	SAMEA2273291	GCA_900075015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/015/GCA_900075015.1_11983_7_67	-	e1125
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.83012	64.2	-	FVEI01	9	4818	4699	3/10/17	3/18/17	Contig	SC	SAMEA2071371	GCA_900132075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/075/GCA_900132075.1_10665_4_52	-	307
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.25529	67.4	-	LPLU01	128	6641	6242	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449654	GCA_001533725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/725/GCA_001533725.1_ASM153372v1	-	MSMB782WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.19421	54.9	-	LRIQ01	124	5242	4975	1/22/16	3/27/17	Contig	JCVI	SAMN04431022	GCA_001525465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/465/GCA_001525465.1_ASM152546v1	-	SMART_1487
Pseudomonas sp. NBRC 111122	1661037	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	6.07311	61.7	-	BCAY01	134	5738	5488	10/4/16	4/13/17	Contig	National Institute of Technology and Evaluation	SAMD00031657	GCA_001753915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/915/GCA_001753915.1_ASM175391v1	-	NBRC 111122
Streptomyces sp. WM6349	1415552	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.60853	72.3	-	LGCZ01	218	6920	6636	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900614	GCA_001279445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/445/GCA_001279445.1_ASM127944v1	-	WM6349
Bacillus sp. RU27A	1907421	PRJEB21408	391664	Terrabacteria group	Firmicutes	3.71723	41.2	-	FZOE01	46	3842	3680	7/13/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05880584	GCA_900188195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/195/GCA_900188195.1_IMG-taxon_2708742398_annotated_assembly	-	RU27A
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.79599	47.4	-	FMGC01	63	3525	3469	8/16/16	8/16/16	Scaffold	SC	SAMEA3545385	GCA_900066775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/775/GCA_900066775.1_14207_7_45	-	-
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.40694	48.9	-	FMGE01	227	2951	2888	8/16/16	8/16/16	Scaffold	SC	SAMEA3545387	GCA_900066785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/785/GCA_900066785.1_14207_7_47	-	-
Bacillus sp. OK838	1882762	PRJEB21440	391630	Terrabacteria group	Firmicutes	5.29363	39.8	-	FZPG01	95	5185	4866	7/13/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05444672	GCA_900188495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/495/GCA_900188495.1_IMG-taxon_2687453793_annotated_assembly	-	OK838
Streptomyces sp. XY152	1415560	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.224	72.4	-	LGDQ01	315	7410	6785	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900623	GCA_001279455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/455/GCA_001279455.1_ASM127945v1	-	XY152
Pseudomonas sp. NBRC 111126	1661041	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	5.60835	62.3	-	BCBC01	210	5321	5075	10/4/16	4/13/17	Contig	National Institute of Technology and Evaluation	SAMD00031661	GCA_001753935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/935/GCA_001753935.1_ASM175393v1	-	NBRC 111126
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.24951	55.2	-	LRIX01	157	5316	5007	1/22/16	3/27/17	Contig	JCVI	SAMN04431015	GCA_001525475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/475/GCA_001525475.1_ASM152547v1	-	SMART_1276
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.38253	67.5	-	LPLV01	101	6703	6357	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449655	GCA_001533745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/745/GCA_001533745.1_ASM153374v1	-	MSMB785WGS
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.86765	64.2	-	FVEK01	2	4874	4748	3/10/17	3/18/17	Contig	SC	SAMEA2068805	GCA_900132105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/105/GCA_900132105.1_10665_4_54	-	309
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.1968	54.8	-	FJXG01	89	5183	4897	4/5/16	3/28/17	Scaffold	SC	SAMEA2273316	GCA_900075025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/025/GCA_900075025.1_11983_7_92	-	e1243
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.73414	31.3	-	FAYE01	29	1805	1710	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683019	GCA_001487795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/795/GCA_001487795.1_UNQMCIIS18a	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.16675	59.9	-	FCFR01	14	4967	4800	1/21/16	3/27/17	Scaffold	SC	SAMEA2274082	GCA_001539125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/125/GCA_001539125.1_12045_8_6	-	2880STDY5683011
[Clostridium] acidurici 9a	1128398	PRJNA79221	79221	Terrabacteria group	Firmicutes	3.10825	29.899	chromosome:NC_018664.1/CP003326.1; plasmid pCuri3:NC_018657.1/CP003327.1	-	2	3017	2838	9/27/12	9/4/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02603272	GCA_000299355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/355/GCA_000299355.1_ASM29935v1	23240052	9a
Streptococcus equi subsp. equi	148942	PRJNA313215	313215	Terrabacteria group	Firmicutes	2.05215	41.2	-	LTDR01	77	1962	1807	5/17/16	3/28/17	Contig	University of Kentucky	SAMN04516914	GCA_001645315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/315/GCA_001645315.1_ASM164531v1	-	Lex90
Enterococcus faecium EnGen0258	1158547	PRJNA88813	88813	Terrabacteria group	Firmicutes	3.06204	37.9	-	AIZX01	19	3124	2921	5/3/13	3/24/17	Scaffold	Broad Institute	SAMN00809145	GCA_000397005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/005/GCA_000397005.1_Ente_faec_UAA1019_V1	-	UAA1019
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.15118	52.4	-	CHZU01	76	2523	2200	4/21/15	4/11/17	Contig	SC	SAMEA1690473	GCA_001355255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/255/GCA_001355255.1_8727_8_52	-	GCGS148
Enterococcus faecalis EnGen0295	1158669	PRJNA89067	89067	Terrabacteria group	Firmicutes	2.95886	37.5	-	AJEQ01	4	3007	2853	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809230	GCA_000395135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/135/GCA_000395135.1_Ente_faec_T21_V1	-	T21
Klebsiella pneumoniae MGH 39	1328373	PRJNA201954	201954	Proteobacteria	Gammaproteobacteria	5.73436	57	-	JCNV01	5	5749	5452	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138579	GCA_000567725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/725/GCA_000567725.1_Kleb_pneu_MGH_39_V1	-	MGH 39
Vibrio parahaemolyticus S026	1394573	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.06173	45.3	-	AWMJ01	439	4782	4546	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338887	GCA_000491655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/655/GCA_000491655.1_S026	-	S026
Clostridioides difficile F200	1232192	PRJNA175457	175457	Terrabacteria group	Firmicutes	4.15596	28.6	-	AVND01	49	3894	3713	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01978903	GCA_000452265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/265/GCA_000452265.2_ASM45226v2	-	F200
Vibrio cholerae VC4370	1225782	PRJNA173393	173393	Proteobacteria	Gammaproteobacteria	3.98668	47.5	-	AMBT01	145	3738	3626	9/27/12	3/27/17	Contig	Institute of Biological Science	SAMN02469954	GCA_000299535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/535/GCA_000299535.2_VC4370.1	-	VC4370
Burkholderia pseudomallei NCTC 13178	1249468	PRJNA179436	179436	Proteobacteria	Betaproteobacteria	7.2717	68	-	ARZM01	206	7600	6960	11/18/15	3/27/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02044381	GCA_001446055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/055/GCA_001446055.1_ASM144605v1	26484663	NCTC 13178
Burkholderia cenocepacia	95486	PRJNA275520	275520	Proteobacteria	Betaproteobacteria	8.65888	66.4	-	JYMY01	196	8229	7815	3/23/17	4/26/17	Contig	CSIR-Institute of Microbial Technology	SAMN03349521	GCA_002071905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/071/905/GCA_002071905.1_ASM207190v1	28428775	BC-21
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.75344	50.7	-	CWWG01	390	5368	4462	7/16/15	2/24/17	Scaffold	SC	SAMEA3345098	GCA_001247945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/945/GCA_001247945.1_Sg_201404332_CAGGCG_L001	-	201404332_1
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.34131	38.3	-	FJGX01	22	3065	2956	2/20/16	3/27/17	Contig	SC	SAMEA2080612	GCA_900055205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/205/GCA_900055205.1_10625_2_29	-	2532STDY5467502
Pseudomonas syringae	317	PRJNA178390	178390	Proteobacteria	Gammaproteobacteria	7.72139	57.1	-	ASJM01	7565	-	-	5/22/13	11/19/13	Scaffold	University of Exeter	SAMN01797595	GCA_000409185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/185/GCA_000409185.1_ASM40918v1	23692644	mixed
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05057	41.1	-	CEKC01	66	2041	1949	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234088	GCA_000945035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/035/GCA_000945035.1_Velvet_assembly	-	S95V
Streptococcus agalactiae CCUG 44050	1105261	PRJNA86243	86243	Terrabacteria group	Firmicutes	2.11601	35.3	-	ANDH01	86	2212	2055	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991105	GCA_000311205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/205/GCA_000311205.1_ASM31120v1	-	CCUG 44050
Acinetobacter baumannii AB_2009-04-01-7	1221263	PRJNA172674	172674	Proteobacteria	Gammaproteobacteria	3.83927	38.9	-	AMHS01	86	3668	3522	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471279	GCA_000301995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/301/995/GCA_000301995.1_ASM30199v1	-	AB_2009-04-01-7
Pseudomonas aeruginosa BWH031	1447539	PRJNA234695	234695	Proteobacteria	Gammaproteobacteria	6.73653	66.2	-	JIEC01	69	6479	6281	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02584697	GCA_000629105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/105/GCA_000629105.1_Pseu_aeru_BWH031_V1	-	BWH031
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2805	996834	PRJNA63765	63765	Spirochaetes	Spirochaetia	4.54918	35	-	AFKM01	338	4077	3724	6/7/11	3/27/17	Scaffold	J. Craig Venter Institute	SAMN00254340	GCA_000217015.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/015/GCA_000217015.3_CLC_glsol119	-	Fiocruz LV2805
Streptococcus pyogenes ABC020050193	1439192	PRJNA233285	233285	Terrabacteria group	Firmicutes	1.83136	38.5	-	JJLE01	2	1881	1757	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567634	GCA_000628845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/845/GCA_000628845.1_Stre_pyog_ABC020050193_V1	-	ABC020050193
Neisseria meningitidis 2004032	1145168	PRJNA83549	83549	Proteobacteria	Betaproteobacteria	2.13412	51.9	-	APUC01	147	2467	2082	5/1/13	3/21/17	Contig	IGS	SAMN01780118	GCA_000386965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/965/GCA_000386965.2_ASM38696v2	-	2004032
Helicobacter pylori Hp P-4d	992103	PRJNA64233	64233	Proteobacteria	delta/epsilon subdivisions	1.6829	39.1	-	AKQE01	9	1650	1502	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778892	GCA_000274745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/745/GCA_000274745.1_ASM27474v1	-	Hp P-4d
Streptococcus pneumoniae GA19998	760802	PRJNA48763	48763	Terrabacteria group	Firmicutes	2.13796	39.8	-	ALCS01	7	2376	2072	7/18/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00792350	GCA_000279835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/835/GCA_000279835.1_ASM27983v1	-	GA19998
Clostridium carboxidivorans P7	536227	PRJNA285141	285141	Terrabacteria group	Firmicutes	5.75278	29.8917	chromosome:NZ_CP011803.1/CP011803.1; plasmid unnamed:NZ_CP011804.1/CP011804.1	-	2	5217	5039	6/24/15	4/10/17	Complete Genome	The Shanghai Institutes for Biological Sciences of the Chinese Academy of Sciences	SAMN03740584	GCA_001038625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/625/GCA_001038625.1_ASM103862v1	-	P7
Mycobacterium tuberculosis MD18489	1447439	PRJNA234552	234552	Terrabacteria group	Actinobacteria	4.37777	65.6	-	JLGO01	94	4317	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584590	GCA_000649855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/855/GCA_000649855.1_Myco_tube_MD18489_V1	-	MD18489
Bacillus cereus	1396	PRJNA345384	345384	Terrabacteria group	Firmicutes	5.20742	35.4	-	MPOL01	56	5720	5331	12/12/16	3/28/17	Contig	University of Otago	SAMN05861659	GCA_001901235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/235/GCA_001901235.1_ASM190123v1	-	NZAS01
Staphylococcus epidermidis	1282	PRJNA319645	319645	Terrabacteria group	Firmicutes	2.39084	32.2	-	LYWH01	71	2396	2261	6/7/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN05194380	GCA_001659515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/515/GCA_001659515.1_ASM165951v1	-	M26
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.0434	37.7	-	JOWN01	30	3124	3037	7/15/14	2/27/17	Contig	Cornell University	SAMN02741468	GCA_000726075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/075/GCA_000726075.1_ASM72607v1	-	FSL R8-5104
Yersinia pestis CMCC93014	755948	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.50717	47.5	-	ADRM01	993	4340	3976	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403061	GCA_000324525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/525/GCA_000324525.1_ASM32452v1	23271803	CMCC93014
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.61395	30.4	-	CULG01	8	1699	1588	3/31/15	3/18/17	Contig	SC	SAMEA1010445	GCA_001223725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/725/GCA_001223725.1_7038_3_96	-	OXC6346
Spiroplasma eriocheiris CCTCC M 207170	743698	PRJNA46263	46263	Terrabacteria group	Tenericutes	1.36476	29.8	chromosome:NZ_CP001973.1/CP001973.1	-	1	1255	1190	3/15/17	3/17/17	Complete Genome	Nanjing Normal University	SAMN03418104	GCA_002028345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/345/GCA_002028345.1_ASM202834v1	28217108	CCTCC M 207170
Staphylococcus aureus M0235	1158517	PRJNA88943	88943	Terrabacteria group	Firmicutes	2.8547	32.9	-	AJCJ01	3	2968	2802	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809169	GCA_000360485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/485/GCA_000360485.1_Stap_aure_M0235_V1	-	M0235
Staphylococcus aureus M0237	1157017	PRJNA88591	88591	Terrabacteria group	Firmicutes	2.90231	32.9	-	AIWD01	6	3052	2873	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792142	GCA_000360505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/505/GCA_000360505.1_Stap_aure_M0237_V1	-	M0237
Leptotrichia sp. oral taxon 847	1785996	PRJNA282954	282954	Fusobacteria	Fusobacteriia	2.19494	29.8	chromosome:NZ_CP014231.1/CP014231.1	-	1	2086	1951	2/9/16	4/11/17	Complete Genome	The Forsyth Institute	SAMN04435855	GCA_001553645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/645/GCA_001553645.1_ASM155364v1	-	F0260
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.73899	30.3	-	CUTD01	20	1857	1761	3/31/15	3/18/17	Contig	SC	SAMEA1401174	GCA_001223745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/745/GCA_001223745.1_7213_3_21	-	OXC6564
Yersinia pestis CMCC95001	755949	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.33731	48.1	-	ADRN01	1361	4140	3753	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403062	GCA_000324545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/545/GCA_000324545.1_ASM32454v1	23271803	CMCC95001
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.12601	37.9	-	JOWK01	22	3181	3084	7/15/14	2/26/17	Contig	Cornell University	SAMN02741465	GCA_000726105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/105/GCA_000726105.1_ASM72610v1	-	FSL R8-5081
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.72628	31.8	-	LZEO01	108	2791	2644	6/13/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04942529	GCA_001662145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/145/GCA_001662145.1_ASM166214v1	-	LRKNS114
Bacillus cereus	1396	PRJNA345384	345384	Terrabacteria group	Firmicutes	5.92659	35.4	-	MPOM01	84	6374	5959	12/12/16	3/28/17	Contig	University of Otago	SAMN05861660	GCA_001901245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/245/GCA_001901245.1_ASM190124v1	-	NZAS02
Mycobacterium tuberculosis MD19964	1447440	PRJNA234553	234553	Terrabacteria group	Actinobacteria	4.3746	65.6	-	JLGN01	106	4339	4119	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584591	GCA_000649875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/875/GCA_000649875.1_Myco_tube_MD19964_V1	-	MD19964
Lutibacter profundi	1622118	PRJNA304382	304382	FCB group	Bacteroidetes/Chlorobi group	2.96698	29.8	chromosome:NZ_CP013355.1/CP013355.1	-	1	2658	2547	2/1/16	4/11/17	Complete Genome	University of Bergen	SAMN04299808	GCA_001543325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/325/GCA_001543325.1_ASM154332v1	-	LP1
Streptococcus pneumoniae GA17484	760788	PRJNA48733	48733	Terrabacteria group	Firmicutes	2.03774	39.8	-	ALCT01	6	2214	1975	7/18/12	3/18/17	Contig	Institute for Genome Sciences	SAMN00792354	GCA_000279855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/855/GCA_000279855.1_ASM27985v1	-	GA17484
Helicobacter pylori Hp P-8b	992105	PRJNA64237	64237	Proteobacteria	delta/epsilon subdivisions	1.6198	39.2	-	AKQG01	5	1597	1447	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778899	GCA_000274765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/765/GCA_000274765.2_ASM27476v2	-	Hp P-8b
Neisseria meningitidis 2001213	1145169	PRJNA83551	83551	Proteobacteria	Betaproteobacteria	2.13988	51.9	-	APUD01	124	2473	2117	5/1/13	3/15/17	Contig	IGS	SAMN01780119	GCA_000386985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/985/GCA_000386985.2_ASM38698v2	-	2001213
Streptococcus pyogenes ABC020051269	1439197	PRJNA233286	233286	Terrabacteria group	Firmicutes	1.7944	38.5	-	JJLF01	15	1835	1731	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567635	GCA_000628865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/865/GCA_000628865.1_Stre_pyog_ABC020051269_V1	-	ABC020051269
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2804	996833	PRJNA63763	63763	Spirochaetes	Spirochaetia	4.55106	35	-	AFKL01	419	4093	3726	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254337	GCA_000217035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/035/GCA_000217035.2_CLC_glsol118	-	Fiocruz LV2804
Pseudomonas aeruginosa BWH030	1447538	PRJNA234694	234694	Proteobacteria	Gammaproteobacteria	6.45142	66.4	-	JIED01	64	6127	5949	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02584696	GCA_000629125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/125/GCA_000629125.1_Pseu_aeru_BWH030_V1	-	BWH030
Acinetobacter baumannii AB_2009-04-02-7	1221264	PRJNA172675	172675	Proteobacteria	Gammaproteobacteria	3.97203	39	-	AMHT01	163	3851	3678	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471251	GCA_000302015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/015/GCA_000302015.1_ASM30201v1	-	AB_2009-04-02-7
Streptococcus agalactiae CCUG 44104	1105263	PRJNA86249	86249	Terrabacteria group	Firmicutes	2.12206	35.3	-	ANDJ01	173	2280	2055	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991101	GCA_000311225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/225/GCA_000311225.1_ASM31122v1	-	CCUG 44104
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.06341	41.1	-	CEIT01	203	2104	1950	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234024	GCA_000945135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/135/GCA_000945135.1_Velvet_assembly	-	S16C
Pseudomonas syringae pv. actinidiae ICMP 19079	1194398	PRJNA167408	167408	Proteobacteria	Gammaproteobacteria	5.78878	58.1	-	AOKL01	2661	7268	7211	7/1/13	1/8/14	Contig	The New Zealand Institute for Plant & Food Research Limited	SAMN02470800	GCA_000416605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/605/GCA_000416605.1_ASM41660v1	-	ICMP 19079
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.53602	38.3	-	FJKK01	60	3228	3086	2/20/16	3/27/17	Contig	SC	SAMEA2077791	GCA_900055215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/215/GCA_900055215.1_10625_3_13	-	2532STDY5467582
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.68569	50.7	-	CWYM01	384	5219	4500	7/16/15	2/24/17	Scaffold	SC	SAMEA2445715	GCA_001247975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/975/GCA_001247975.1_12971_8_32	-	H101960391
Burkholderia cenocepacia	95486	PRJNA275522	275522	Proteobacteria	Betaproteobacteria	8.70879	66.4	-	JYNA01	275	8245	7829	3/23/17	4/26/17	Contig	CSIR-Institute of Microbial Technology	SAMN03349523	GCA_002071935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/071/935/GCA_002071935.1_ASM207193v1	28428775	BC-41
Burkholderia pseudomallei NCTC 13179	1241583	PRJNA179436	179436	Proteobacteria	Betaproteobacteria	7.21759	68.1	-	ARZN01	180	7481	6869	11/18/15	3/27/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02044382	GCA_001446075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/075/GCA_001446075.1_ASM144607v1	26484663	NCTC 13179
Vibrio cholerae CP1033(6)	991924	PRJNA63855	63855	Proteobacteria	Gammaproteobacteria	3.98813	47.5	-	AJRL01	33	3815	3632	10/10/12	3/23/17	Contig	Institute for Genome Sciences	SAMN02435814	GCA_000304755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/755/GCA_000304755.1_ASM30475v1	26980836	CP1033(6)
Clostridioides difficile F480	1232193	PRJNA175458	175458	Terrabacteria group	Firmicutes	3.9896	28.3	-	AVNE01	32	3699	3575	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01978904	GCA_000452285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/285/GCA_000452285.2_ASM45228v2	-	F480
Vibrio parahaemolyticus S025	1394572	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.17563	45.1	-	AWMK01	356	4884	4667	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338886	GCA_000491675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/675/GCA_000491675.1_S025	-	S025
Klebsiella pneumoniae MGH 35	1328371	PRJNA201950	201950	Proteobacteria	Gammaproteobacteria	5.47017	57.3	-	JCNW01	3	5476	5233	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138575	GCA_000567745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/745/GCA_000567745.1_Kleb_pneu_MGH_35_V1	-	MGH 35
Enterococcus faecalis EnGen0284	1158671	PRJNA89071	89071	Terrabacteria group	Firmicutes	3.01755	37.2	-	AJES01	8	3046	2884	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809233	GCA_000395175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/175/GCA_000395175.1_Ente_faec_Com1_V1	-	Com1
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14362	52.4	-	CHKB01	76	2506	2203	4/21/15	4/11/17	Contig	SC	SAMEA1690476	GCA_001355275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/275/GCA_001355275.1_8289_2_54	-	GCGS054
Enterococcus faecium EnGen0259	1158548	PRJNA88815	88815	Terrabacteria group	Firmicutes	2.54251	38.2	-	AIZY01	15	2581	2358	5/3/13	3/24/17	Scaffold	Broad Institute	SAMN00809146	GCA_000397025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/025/GCA_000397025.1_Ente_faec_UAA1022_V1	-	UAA1022
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.14006	41.2	-	CWBK01	80	2081	1900	6/23/15	3/27/17	Contig	SC	SAMEA1032899	GCA_900004825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/004/825/GCA_900004825.1_6903_4_67	-	EQUI0117
Clostridium beijerinckii NRRL B-598	1428454	PRJNA229510	229510	Terrabacteria group	Firmicutes	6.18688	29.8	chromosome:NZ_CP011966.2/CP011966.2	-	1	5428	5081	9/1/15	2/23/17	Complete Genome	"Department of Biomedical Engineering, Brno University of Technology"	SAMN02427303	GCA_000506785.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/785/GCA_000506785.3_ASM50678v3	"246,529,802,641,045,000,000,000"	NRRL B-598
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.30592	59.9	-	FCIY01	29	5084	4908	1/21/16	3/27/17	Scaffold	SC	SAMEA2273981	GCA_001539145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/145/GCA_001539145.1_12082_3_16	-	2880STDY5682908
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.86557	31	-	FBOL01	42	1980	1876	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683435	GCA_001487815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/815/GCA_001487815.1_H132680116	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.81624	55	-	FJXD01	49	4669	4424	4/5/16	3/28/17	Scaffold	SC	SAMEA2273309	GCA_900075035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/035/GCA_900075035.1_11983_7_85	-	e1219
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16196	64.2	-	FVEL01	29	5158	5025	3/10/17	3/18/17	Contig	SC	SAMEA2070663	GCA_900132115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/115/GCA_900132115.1_10665_4_56	-	311
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.10555	67.5	-	LPLX01	100	6410	6056	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449657	GCA_001533765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/765/GCA_001533765.1_ASM153376v1	-	MSMB791WGS
Enterobacter hormaechei	158836	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.00223	54.6	-	LREQ01	67	4907	4649	1/22/16	3/27/17	Contig	JCVI	SAMN04252894	GCA_001526005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/005/GCA_001526005.1_ASM152600v1	-	SMART_272
Pseudomonas sp. NBRC 111139	1661054	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	6.43447	61.4	-	BCBP01	146	6100	5827	10/4/16	4/13/17	Contig	National Institute of Technology and Evaluation	SAMD00031674	GCA_001753955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/955/GCA_001753955.1_ASM175395v1	-	NBRC 111139
Streptomyces sp. XY511	1519480	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.05204	72.4	-	LGDM01	315	7279	6942	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900628	GCA_001279485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/485/GCA_001279485.1_ASM127948v1	-	XY511
Bacillus sp. B25(2016b)	1868655	PRJNA325934	325934	Terrabacteria group	Firmicutes	5.11341	35.1	chromosome:CP016285.1	-	1	5167	4937	7/5/16	7/5/16	Chromosome	Instituto Politecnico Nacional	SAMN05256515	GCA_001679765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/765/GCA_001679765.1_ASM167976v1	-	B25(2016b)
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.24273	37.6	-	FMGK01	56	3054	3003	8/16/16	8/16/16	Scaffold	SC	SAMEA3545398	GCA_900066855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/855/GCA_900066855.1_14207_7_58	-	-
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.65027	58.2	-	FMGM01	35	3586	3524	8/16/16	8/16/16	Scaffold	SC	SAMEA3545399	GCA_900066865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/865/GCA_900066865.1_14207_7_59	-	-
Bacillus sp. CAG:988	1262708	PRJEB1046	206953	Terrabacteria group	Firmicutes	1.4016	34.4	-	CBIF01	25	1421	1397	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138751	GCA_000437335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/437/335/GCA_000437335.1_MGS988	-	-
Streptomyces sp. H021	1519486	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.0623	72.5	-	LGDR01	283	7288	6928	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900637	GCA_001279495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/495/GCA_001279495.1_ASM127949v1	-	H021
Pseudomonas sp. NBRC 111141	1661056	PRJDB3001	256149	Proteobacteria	Gammaproteobacteria	6.2011	62	-	BCBR01	296	5899	5502	10/4/16	4/13/17	Contig	National Institute of Technology and Evaluation	SAMD00031676	GCA_001753975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/753/975/GCA_001753975.1_ASM175397v1	-	NBRC 111141
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.90909	55.3	-	LRJK01	66	4924	4714	1/22/16	3/27/17	Contig	JCVI	SAMN04431002	GCA_001526015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/015/GCA_001526015.1_ASM152601v1	-	SMART_1342
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.10898	67.5	-	LPLY01	95	6399	6059	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449658	GCA_001533785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/785/GCA_001533785.1_ASM153378v1	-	MSMB792WGS
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.92982	64.2	-	FVEM01	13	4918	4771	3/10/17	3/18/17	Contig	SC	SAMEA2068806	GCA_900132125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/125/GCA_900132125.1_10665_4_57	-	312
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.00004	55	-	FJXB01	54	4947	4690	4/5/16	3/28/17	Scaffold	SC	SAMEA2273208	GCA_900075045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/045/GCA_900075045.1_12045_4_79	-	e1089
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65831	31.4	-	FBJE01	30	1716	1626	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683304	GCA_001487835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/835/GCA_001487835.1_CCN181	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.97611	60.2	-	FCFM01	18	4709	4553	1/21/16	3/27/17	Scaffold	SC	SAMEA2274080	GCA_001539185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/185/GCA_001539185.1_12045_8_4	-	2880STDY5683009
Spiroplasma eriocheiris	315358	PRJNA253647	253647	Terrabacteria group	Tenericutes	1.36571	29.8	chromosome:NZ_CP011856.1/CP011856.1	-	1	1253	1194	6/17/15	4/10/17	Complete Genome	Academia Sinica	SAMN03488050	GCA_001029265.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/265/GCA_001029265.1_ASM102926v1	26254485	DSM 21848
Streptococcus equi	1336	PRJEB16940	351088	Terrabacteria group	Firmicutes	2.12526	41.2	-	FODQ01	89	2081	1871	10/29/16	3/28/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05421801	GCA_900110405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/405/GCA_900110405.1_IMG-taxon_2684622844_annotated_assembly	-	DSM 20561
Enterococcus faecium EnGen0260	1158549	PRJNA88817	88817	Terrabacteria group	Firmicutes	2.9816	37.8	-	AIZZ01	16	3068	2845	5/3/13	3/24/17	Scaffold	Broad Institute	SAMN00809098	GCA_000397045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/045/GCA_000397045.1_Ente_faec_UAA1023_V1	-	UAA1023
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14528	52.4	-	CGGR01	79	2522	2186	3/15/15	4/11/17	Contig	SC	SAMEA1690481	GCA_001355295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/295/GCA_001355295.1_8289_2_78	-	GCGS078
Enterococcus faecalis EnGen0293	1158673	PRJNA89075	89075	Terrabacteria group	Firmicutes	3.10547	37.4	-	AJEU01	16	3193	3020	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809235	GCA_000395205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/205/GCA_000395205.1_Ente_faec_E1_V1	-	E1
Klebsiella pneumoniae MGH 29	1328367	PRJNA201944	201944	Proteobacteria	Gammaproteobacteria	5.60276	57.2	-	JCNY01	11	5687	5453	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138569	GCA_000567785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/785/GCA_000567785.1_Kleb_pneu_MGH_29_V1	-	MGH 29
Vibrio parahaemolyticus S024	1394571	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.08389	45.2	-	AWML01	422	4800	4574	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338885	GCA_000491695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/695/GCA_000491695.1_S024	-	S024
Clostridioides difficile F525	1232194	PRJNA175459	175459	Terrabacteria group	Firmicutes	4.03133	28.3	-	AVNF01	43	3763	3593	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01978906	GCA_000452305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/305/GCA_000452305.2_ASM45230v2	-	F525
Vibrio cholerae HC-1A2	991937	PRJNA63881	63881	Proteobacteria	Gammaproteobacteria	3.96543	47.8	-	AJRO01	19	3804	3547	10/10/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00249592	GCA_000304775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/775/GCA_000304775.1_ASM30477v1	-	HC-1A2
Burkholderia pseudomallei PHLS9	1321253	PRJNA179436	179436	Proteobacteria	Betaproteobacteria	7.07419	68.2	-	ARZP01	160	7350	6813	11/18/15	3/27/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02044384	GCA_001446095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/095/GCA_001446095.1_ASM144609v1	26484663	PHLS9
Burkholderia cenocepacia	95486	PRJNA275524	275524	Proteobacteria	Betaproteobacteria	8.66893	66.4	-	JYNB01	192	8230	7826	3/23/17	4/26/17	Contig	CSIR-Institute of Microbial Technology	SAMN03349524	GCA_002071945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/071/945/GCA_002071945.1_ASM207194v1	28428775	IPCU-A
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.72961	50.8	-	CXKL01	398	5281	4554	7/17/15	2/24/17	Scaffold	SC	SAMEA2003440	GCA_001247995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/995/GCA_001247995.1_8290_4_42	-	99444
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.34889	38.3	-	FJCK01	19	3049	2946	2/20/16	3/27/17	Contig	SC	SAMEA2060117	GCA_900055575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/575/GCA_900055575.1_10771_1_69	-	2531STDY5467350
Pseudomonas syringae pv. actinidiae ICMP 18807	1194404	PRJNA167414	167414	Proteobacteria	Gammaproteobacteria	5.61458	58.2	-	AOKG01	2758	7302	7257	7/1/13	1/8/14	Contig	The New Zealand Institute for Plant & Food Research Limited	SAMN02470790	GCA_000416625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/625/GCA_000416625.1_ASM41662v1	-	ICMP 18807
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.1631	41.1	-	CEKR01	118	2197	2064	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234091	GCA_000945155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/155/GCA_000945155.1_Velvet_assembly	-	S96W
Streptococcus agalactiae CCUG 44186	1105266	PRJNA86255	86255	Terrabacteria group	Firmicutes	2.12596	35.5	-	ANDM01	46	2192	2022	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991097	GCA_000311245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/245/GCA_000311245.1_ASM31124v1	-	CCUG 44186
Acinetobacter baumannii AB_908-13	1221267	PRJNA172678	172678	Proteobacteria	Gammaproteobacteria	3.97316	38.9	-	AMHW01	175	3844	3696	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471253	GCA_000302035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/035/GCA_000302035.1_ASM30203v1	-	AB_908-13
Pseudomonas aeruginosa BWH029	1447537	PRJNA234693	234693	Proteobacteria	Gammaproteobacteria	6.22847	66.4	-	JIEE01	50	5893	5718	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02584695	GCA_000629145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/145/GCA_000629145.1_Pseu_aeru_BWH029_V1	-	BWH029
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2799	996832	PRJNA63761	63761	Spirochaetes	Spirochaetia	4.55121	35	-	AFKK01	409	4108	3719	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254339	GCA_000217055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/055/GCA_000217055.2_CLC_glsol117	-	Fiocruz LV2799
Streptococcus pyogenes ABC020052023	1439204	PRJNA233287	233287	Terrabacteria group	Firmicutes	1.89275	38.5	-	JJLG01	2	1971	1842	4/14/14	3/24/17	Contig	Broad Institute	SAMN02567636	GCA_000628885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/628/885/GCA_000628885.1_Stre_pyog_ABC020052023_V1	-	ABC020052023
Neisseria meningitidis 2004264	1145170	PRJNA83553	83553	Proteobacteria	Betaproteobacteria	2.21834	52	-	APUE01	131	2576	2203	5/1/13	3/21/17	Contig	IGS	SAMN01780120	GCA_000387005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/005/GCA_000387005.2_ASM38700v2	-	2004264
Helicobacter pylori Hp P-1	992072	PRJNA64171	64171	Proteobacteria	delta/epsilon subdivisions	1.66964	39.1	-	AKPI01	6	1634	1489	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778885	GCA_000274785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/785/GCA_000274785.1_ASM27478v1	23661595	Hp P-1
Streptococcus pneumoniae GA62331	1131630	PRJNA80871	80871	Terrabacteria group	Firmicutes	2.1891	39.7	-	ALCU01	11	2408	2126	7/18/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00792351	GCA_000279875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/875/GCA_000279875.1_ASM27987v1	-	GA62331
Campylobacter lari	201	PRJNA239573	239573	Proteobacteria	delta/epsilon subdivisions	1.56303	29.8	chromosome:NZ_CP011372.1/CP011372.1	-	1	1613	1531	6/2/15	4/3/17	Complete Genome	Agricultural Research Service	SAMN03580996	GCA_001017575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/575/GCA_001017575.1_ASM101757v1	26472835	Slaughter Beach
Mycobacterium tuberculosis MD19693	1447441	PRJNA234554	234554	Terrabacteria group	Actinobacteria	4.42701	65.6	-	JLGM01	97	4352	4139	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584592	GCA_000649895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/895/GCA_000649895.1_Myco_tube_MD19693_V1	-	MD19693
Bacillus cereus	1396	PRJNA345384	345384	Terrabacteria group	Firmicutes	5.90415	35.4	-	MPON01	44	6321	5936	12/12/16	3/28/17	Contig	University of Otago	SAMN05861661	GCA_001901305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/305/GCA_001901305.1_ASM190130v1	-	NZAS03
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.67815	31.8	-	LZER01	93	2746	2588	6/13/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN05215800	GCA_001662155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/155/GCA_001662155.1_ASM166215v1	-	LRKNS117
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09472	37.9	-	JOWL01	20	3148	3046	7/15/14	2/26/17	Contig	Cornell University	SAMN02741466	GCA_000726125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/125/GCA_000726125.1_ASM72612v1	-	FSL R8-5088
Yersinia pestis CMCC96001	755950	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.51759	47.6	-	ADRO01	907	4250	4010	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403063	GCA_000324565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/565/GCA_000324565.1_ASM32456v1	23271803	CMCC96001
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66636	30.4	-	CUSR01	22	1754	1657	3/31/15	3/18/17	Contig	SC	SAMEA1010660	GCA_001223765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/765/GCA_001223765.1_7092_1_96	-	OXC6543
Borrelia hermsii CC1	1329908	PRJNA201001	201001	Spirochaetes	Spirochaetia	0.92228	29.8	chromosome:NZ_CP011060.1/CP011060.1	-	1	864	821	3/19/15	4/3/17	Complete Genome	University of California Irvine	SAMN03408291	GCA_000956315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/315/GCA_000956315.1_ASM95631v1	-	CC1
Staphylococcus aureus M0239	1157018	PRJNA88593	88593	Terrabacteria group	Firmicutes	2.74729	32.8	-	AIWE01	2	2858	2694	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00792143	GCA_000360525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/525/GCA_000360525.1_Stap_aure_M0239_V1	-	M0239
Staphylococcus aureus M0240	1224923	PRJNA173471	173471	Terrabacteria group	Firmicutes	2.86164	32.9	-	ANZN01	11	3009	2831	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN01125836	GCA_000360545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/545/GCA_000360545.1_Stap_aure_M0240_V1	-	M0240
Campylobacter subantarcticus LMG 24377	1388752	PRJNA215650	215650	Proteobacteria	delta/epsilon subdivisions	1.85299	29.8	chromosome:NZ_CP007773.1/CP007773.1	-	1	1908	1782	1/7/15	4/10/17	Complete Genome	"USDA, ARS"	SAMN03248549	GCA_000816305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/305/GCA_000816305.1_ASM81630v1	25381664	LMG 24377
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.65176	30.3	-	CUTB01	14	1731	1629	3/31/15	3/18/17	Contig	SC	SAMEA1401320	GCA_001223845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/845/GCA_001223845.1_7213_3_2	-	OXC6545
Yersinia pestis CMCC96007	755951	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.30341	48.2	-	ADRP01	1563	4184	3755	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403064	GCA_000324585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/585/GCA_000324585.1_ASM32458v1	23271803	CMCC96007
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.1078	37.8	-	JOXF01	47	3201	3083	7/15/14	2/26/17	Contig	Cornell University	SAMN02741488	GCA_000726145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/145/GCA_000726145.1_ASM72614v1	-	FSL R8-5559
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.70034	31.8	-	LZEQ01	99	2780	2608	6/13/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN05215794	GCA_001662165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/165/GCA_001662165.1_ASM166216v1	-	LRKNS116
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.54233	35.2	-	MIFB01	262	5981	5641	12/13/16	3/28/17	Contig	"OARSA, CFSAN"	SAMN05415728	GCA_001901925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/925/GCA_001901925.1_ASM190192v1	-	MOD1_Bc12
Mycobacterium tuberculosis MD19042	1447442	PRJNA234555	234555	Terrabacteria group	Actinobacteria	4.3913	65.6	-	JLGL01	89	4325	4108	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584593	GCA_000649915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/915/GCA_000649915.1_Myco_tube_MD19042_V1	-	MD19042
Campylobacter sputorum bv. faecalis CCUG 20703	1031920	PRJNA66805	66805	Proteobacteria	delta/epsilon subdivisions	1.75729	29.7	chromosome:NZ_CP019683.1/CP019683.1	-	1	1795	1704	7/18/17	7/21/17	Complete Genome	"USDA, ARS, WRRC"	SAMN03737989	GCA_002220735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/735/GCA_002220735.1_ASM222073v1	28633450	CCUG 20703
Streptococcus pneumoniae GA60132	1131627	PRJNA80865	80865	Terrabacteria group	Firmicutes	2.18156	39.6	-	ALCV01	15	2389	2133	7/18/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00792353	GCA_000279895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/895/GCA_000279895.1_ASM27989v1	-	GA60132
Helicobacter pylori Hp P-2	992073	PRJNA64173	64173	Proteobacteria	delta/epsilon subdivisions	1.69387	39	-	AKPJ01	6	1651	1506	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778901	GCA_000274805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/805/GCA_000274805.1_ASM27480v1	23661595	Hp P-2
Neisseria meningitidis 2000175	1145171	PRJNA83555	83555	Proteobacteria	Betaproteobacteria	2.22809	52	-	APUF01	133	2581	2206	5/1/13	3/15/17	Contig	IGS	SAMN01780121	GCA_000387025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/025/GCA_000387025.2_ASM38702v2	-	2000175
Streptococcus pyogenes SP8-LAU	1390083	PRJNA215885	215885	Terrabacteria group	Firmicutes	1.91741	38.5	-	AWPF01	186	1895	1773	4/28/14	3/24/17	Contig	Lebanese American University	SAMN02741845	GCA_000648715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/715/GCA_000648715.1_Draft_SP8-LAU_Genome	24831139	SP8-LAU
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2791	996831	PRJNA63759	63759	Spirochaetes	Spirochaetia	4.55366	35	-	AFKJ01	247	4049	3734	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254336	GCA_000217075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/075/GCA_000217075.2_CLC_glsol116	-	Fiocruz LV2791
Pseudomonas aeruginosa 3581	1447536	PRJNA234692	234692	Proteobacteria	Gammaproteobacteria	6.91136	66	-	JIEF01	77	6718	6504	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02584694	GCA_000629165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/165/GCA_000629165.1_Pseu_aeru_3581_V1	-	3581
Acinetobacter baumannii AB_908-14-7	1221268	PRJNA172679	172679	Proteobacteria	Gammaproteobacteria	3.85066	39.1	-	AMHX01	291	3812	3599	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471280	GCA_000302055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/055/GCA_000302055.1_ASM30205v1	-	AB_908-14-7
Streptococcus agalactiae LMG 15089	1105275	PRJNA86277	86277	Terrabacteria group	Firmicutes	2.18188	35.4	-	ANDV01	42	2285	2164	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991086	GCA_000311265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/265/GCA_000311265.1_ASM31126v1	-	LMG 15089
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.28895	40.9	-	CEDP01	100	2302	2137	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233888	GCA_000945215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/215/GCA_000945215.1_Velvet_assembly	-	LS0P
Pseudomonas syringae pv. actinidiae ICMP 19070	1194408	PRJNA167432	167432	Proteobacteria	Gammaproteobacteria	5.8872	58.6	-	AOJY01	2493	6591	6544	7/1/13	1/8/14	Contig	The New Zealand Institute for Plant & Food Research Limited	SAMN02470797	GCA_000416685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/685/GCA_000416685.1_ASM41668v1	-	ICMP 19070
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.36317	38.3	-	FJEQ01	29	3084	2957	2/20/16	3/27/17	Contig	SC	SAMEA2065273	GCA_900055585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/585/GCA_900055585.1_10771_3_83	-	2531STDY5467460
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.7393	50.6	-	CWXU01	450	5530	4475	7/16/15	2/24/17	Scaffold	SC	SAMEA2434372	GCA_001248085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/085/GCA_001248085.1_12850_1_45	-	KY 1633
Burkholderia cenocepacia	95486	PRJNA275525	275525	Proteobacteria	Betaproteobacteria	8.66706	66.4	-	JYNC01	183	8223	7820	3/23/17	4/26/17	Contig	CSIR-Institute of Microbial Technology	SAMN03349526	GCA_002071955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/071/955/GCA_002071955.1_ASM207195v1	28428775	IPCU-B
Burkholderia pseudomallei RF85Bp37	1321257	PRJNA179436	179436	Proteobacteria	Betaproteobacteria	7.03377	68.2	-	ARZT01	284	7370	6739	11/18/15	3/27/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02044388	GCA_001446115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/115/GCA_001446115.1_ASM144611v1	26484663	RF85Bp37
Vibrio cholerae HC-61A2	991943	PRJNA63893	63893	Proteobacteria	Gammaproteobacteria	4.00012	47.8	-	AJRU01	24	3819	3554	10/10/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00717275	GCA_000304795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/795/GCA_000304795.1_ASM30479v1	-	HC-61A2
Clostridioides difficile F548	1232195	PRJNA175460	175460	Terrabacteria group	Firmicutes	4.25771	28.7	-	AVNG01	17	4077	3917	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01978907	GCA_000452325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/325/GCA_000452325.2_ASM45232v2	-	F548
Vibrio parahaemolyticus S023	1394570	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.12333	45.2	-	AWMM01	685	4944	4624	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338884	GCA_000491715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/715/GCA_000491715.1_S023	-	S023
Klebsiella pneumoniae BIDMC 7A	1328402	PRJNA202008	202008	Proteobacteria	Gammaproteobacteria	5.72917	57	-	JAPO01	12	5842	5574	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138627	GCA_000567825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/825/GCA_000567825.1_Kleb_pneu_BIDMC_7A_V2	-	BIDMC 7A
Enterococcus faecalis ATCC 27275	1158675	PRJNA89079	89079	Terrabacteria group	Firmicutes	3.00114	37.4	-	AJEW01	8	3049	2889	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809237	GCA_000395245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/245/GCA_000395245.1_Ente_faec_ATCC_27275_V1	-	ATCC 27275
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.10098	52.6	-	CHKA01	70	2474	2153	4/21/15	4/11/17	Contig	SC	SAMEA1690485	GCA_001355315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/315/GCA_001355315.1_8289_2_32	-	GCGS032
Enterococcus faecium EnGen0375	1138937	PRJNA82525	82525	Terrabacteria group	Firmicutes	3.12001	37.9	-	AHYO01	16	3223	2962	5/31/13	3/24/17	Scaffold	Broad Institute	SAMN02596966	GCA_000407065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/065/GCA_000407065.1_Ente_faec_Efm_NY2-1_V1	-	EnGen0375
Streptococcus equi subsp. zooepidemicus BHS5	681573	PRJEA40565	40565	Terrabacteria group	Firmicutes	2.13953	41.6	-	CABY01	11	2009	1883	10/21/10	3/22/17	Scaffold	Centre for Genomic Research. University of Liverpool	SAMEA2272004	GCA_000208725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/208/725/GCA_000208725.1_ASM20872v1	20713629	BHS5
Campylobacter sputorum bv. sputorum RM3237	1031754	PRJNA66801	66801	Proteobacteria	delta/epsilon subdivisions	1.75226	29.7	chromosome:NZ_CP019682.1/CP019682.1	-	1	1795	1706	7/18/17	7/21/17	Complete Genome	"USDA, ARS, WRRC"	SAMN03737991	GCA_002220795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/795/GCA_002220795.1_ASM222079v1	28633450	RM3237
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.20549	59.9	-	FCKN01	19	5021	4855	1/21/16	3/27/17	Scaffold	SC	SAMEA2274034	GCA_001539205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/205/GCA_001539205.1_12082_3_59	-	2880STDY5682962
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75079	31.2	-	FAZZ01	19	1847	1742	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683058	GCA_001487855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/855/GCA_001487855.1_EC3879	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.28214	54.9	-	FJWU01	64	5224	4980	4/5/16	3/28/17	Scaffold	SC	SAMEA2273210	GCA_900075055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/055/GCA_900075055.1_12045_4_81	-	e1092
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.04647	64.2	-	FSBH01	34	5038	4900	12/14/16	3/21/17	Contig	SC	SAMEA2070664	GCA_900132135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/135/GCA_900132135.1_10665_4_59	-	314
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.1111	67.5	-	LPMD01	85	6402	6063	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449663	GCA_001533865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/865/GCA_001533865.1_ASM153386v1	-	MSMB803WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.09502	55.1	-	LRJO01	68	4976	4764	1/22/16	3/27/17	Contig	JCVI	SAMN04430998	GCA_001526025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/025/GCA_001526025.1_ASM152602v1	-	UAH-2/S629
Pseudomonas sp. BS-2016	1907766	PRJNA319672	319672	Proteobacteria	Gammaproteobacteria	5.1383	58.5	-	MLCU01	99	4745	4520	10/20/16	4/13/17	Contig	"University of Michigan, Ann Arbor"	SAMN05893016	GCA_001806125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/125/GCA_001806125.1_ASM180612v1	-	AU14541
Streptomyces sp. NRRL B-3648	1519493	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.58787	72.4	-	LGDZ01	264	7805	7279	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900645	GCA_001279545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/545/GCA_001279545.1_ASM127954v1	-	NRRL B-3648
Bacillus sp. ES3	505697	PRJEB16342	349295	Terrabacteria group	Firmicutes	8.32961	39.2	-	FNMN01	18	-	-	10/22/16	4/17/17	Scaffold	URMITE	SAMEA4521259	GCA_900106505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/505/GCA_900106505.1_PRJEB16342	-	ES3
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.61742	56.6	-	FMGP01	11	2442	2393	8/16/16	8/16/16	Scaffold	SC	SAMEA3545404	GCA_900066905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/905/GCA_900066905.1_14207_7_64	-	-
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	2.84777	29.5	-	FMGQ01	70	3004	2946	8/16/16	8/16/16	Scaffold	SC	SAMEA3545413	GCA_900066915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/915/GCA_900066915.1_14207_7_73	-	-
Bacillus sp. WBUNB001	1234146	PRJNA174733	174733	Terrabacteria group	Firmicutes	5.60907	35.1	-	ANAU01	328	-	-	11/2/12	1/8/14	Contig	West bengal University of Technology	SAMN02472126	GCA_000309525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/525/GCA_000309525.1_WBUNB001ver01	23409265	WBUNB001
Streptomyces sp. NRRL F-4707	1519496	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.83636	72.6	-	LGEF01	210	7038	6680	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900651	GCA_001279605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/605/GCA_001279605.1_ASM127960v1	-	NRRL F-4707
Pseudomonas sp. BS-2016	1907766	PRJNA319672	319672	Proteobacteria	Gammaproteobacteria	5.13256	58.6	-	MLCS01	113	4828	4602	10/20/16	4/13/17	Contig	"University of Michigan, Ann Arbor"	SAMN05892927	GCA_001806135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/135/GCA_001806135.1_ASM180613v1	-	AU9518
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.24788	55	-	LRIN01	124	5192	4935	1/22/16	3/27/17	Contig	JCVI	SAMN04430987	GCA_001526035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/035/GCA_001526035.1_ASM152603v1	-	SMART_1305
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.6693	67	-	LPMI01	172	6991	6562	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449668	GCA_001533945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/945/GCA_001533945.1_ASM153394v1	-	MSMB818WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.0463	64.2	-	FSBJ01	33	5043	4901	12/14/16	3/21/17	Contig	SC	SAMEA2068807	GCA_900132155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/155/GCA_900132155.1_10665_4_60	-	315
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.70869	55.2	-	FJXA01	57	4567	4309	4/5/16	3/28/17	Scaffold	SC	SAMEA2273320	GCA_900075065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/065/GCA_900075065.1_11983_7_96	-	e1265
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.74979	31.2	-	FBCC01	19	1839	1742	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683118	GCA_001487875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/875/GCA_001487875.1_EC6304	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.15663	60.1	-	FCGI01	24	4848	4695	1/21/16	3/27/17	Scaffold	SC	SAMEA2274083	GCA_001539225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/225/GCA_001539225.1_12045_8_7	-	2880STDY5683013
Campylobacter lari subsp. concheus LMG 11760	1031536	PRJNA66781	66781	Proteobacteria	delta/epsilon subdivisions	1.5021	29.7	chromosome:NZ_CP007771.1/CP007771.1	-	1	1537	1457	1/7/15	4/2/17	Complete Genome	"USDA, ARS, WRRC"	SAMN03248542	GCA_000816225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/225/GCA_000816225.1_ASM81622v1	25381664	LMG 11760
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.13466	41.2	-	CVYV01	83	2078	1893	6/23/15	3/26/17	Scaffold	SC	SAMEA1032756	GCA_001175145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/145/GCA_001175145.1_6830_4_94	-	EQUI0239
Enterococcus faecium EnGen0376	1138938	PRJNA82527	82527	Terrabacteria group	Firmicutes	3.12796	38	-	AHYP01	25	3181	2934	5/31/13	3/24/17	Scaffold	Broad Institute	SAMN02596967	GCA_000407085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/085/GCA_000407085.1_Ente_faec_Efm_NY2-2_V1	-	EnGen0376
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14247	52.4	-	CFLX01	78	2519	2183	3/15/15	4/11/17	Contig	SC	SAMEA1690487	GCA_001355335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/335/GCA_001355335.1_8727_8_74	-	GCGS170
Enterococcus faecalis ATCC 27959	1158676	PRJNA89081	89081	Terrabacteria group	Firmicutes	2.94393	37.6	-	AJEX01	2	2971	2843	5/3/13	3/24/17	Scaffold	Broad Institute	SAMN00809238	GCA_000395265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/265/GCA_000395265.1_Ente_faec_ATCC_27959_V1	-	ATCC 27959
Klebsiella pneumoniae UCICRE 13	1328396	PRJNA201999	201999	Proteobacteria	Gammaproteobacteria	5.32428	57.3	-	JCOA01	4	5373	5141	2/6/14	2/21/17	Scaffold	Broad Institute	SAMN02138618	GCA_000567845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/845/GCA_000567845.1_Kleb_pneu_UCI_13_V1	-	UCICRE 13
Vibrio parahaemolyticus S022	1394569	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.22298	45.2	-	AWMN01	444	5046	4819	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338883	GCA_000491735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/735/GCA_000491735.1_S022	-	S022
Clostridioides difficile F601	1232196	PRJNA175461	175461	Terrabacteria group	Firmicutes	4.1032	28.3	-	AVNH01	40	3747	3609	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01978908	GCA_000452345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/345/GCA_000452345.2_ASM45234v2	-	F601
Vibrio cholerae HC-46B1	991941	PRJNA63889	63889	Proteobacteria	Gammaproteobacteria	3.94192	47.7	-	AJSL01	24	3775	3517	10/15/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00752440	GCA_000305605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/605/GCA_000305605.1_ASM30560v1	-	HC-46B1
Burkholderia pseudomallei RNS3Bp1	1321258	PRJNA179436	179436	Proteobacteria	Betaproteobacteria	7.12084	68.2	-	ARZU01	192	7424	6834	11/18/15	3/27/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02044389	GCA_001446125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/125/GCA_001446125.1_ASM144612v1	26484663	RNS3Bp1
Burkholderia cenocepacia	95486	PRJNA275518	275518	Proteobacteria	Betaproteobacteria	7.89016	67.1	-	JYMW01	133	7399	7082	3/23/17	4/26/17	Contig	CSIR-Institute of Microbial Technology	SAMN03349483	GCA_002071995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/071/995/GCA_002071995.1_ASM207199v1	28428775	BC-3
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.7617	50.7	-	CXAF01	396	5392	4594	7/16/15	2/24/17	Scaffold	SC	SAMEA2445767	GCA_001248155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/155/GCA_001248155.1_12971_8_75	-	H141000108
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.46155	38.3	-	FJGP01	34	3173	3056	2/20/16	3/27/17	Contig	SC	SAMEA2077490	GCA_900055595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/595/GCA_900055595.1_10625_2_18	-	2532STDY5467491
Pseudomonas syringae pv. actinidiae	103796	PRJDB2950	289070	Proteobacteria	Gammaproteobacteria	6.34267	58.5	-	BBWG01	291	7278	6330	7/18/15	3/9/16	Contig	"NARO Institute of Fruit Tree Science (NIFTS), National Agriculture and Food Research Organization (NARO)"	SAMD00028038	GCA_001270005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/005/GCA_001270005.1_ASM127000v1	26891997	MAFF 212056
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.12298	41.1	-	CEDW01	136	2155	2009	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233906	GCA_000945355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/355/GCA_000945355.1_Velvet_assembly	-	LS2R
Streptococcus agalactiae MRI Z1-215	1154878	PRJNA86415	86415	Terrabacteria group	Firmicutes	2.14112	35.3	-	ANET01	28	2191	2053	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993325	GCA_000311305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/305/GCA_000311305.1_ASM31130v1	-	MRI Z1-215
Acinetobacter baumannii AB_909-05	1221271	PRJNA172682	172682	Proteobacteria	Gammaproteobacteria	4.0456	38.9	-	AMIA01	181	3971	3782	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471227	GCA_000302075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/075/GCA_000302075.1_ASM30207v1	-	AB_909-05
Pseudomonas aeruginosa 3580	1447535	PRJNA234691	234691	Proteobacteria	Gammaproteobacteria	6.91877	66	-	JIEG01	72	6737	6521	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02584693	GCA_000629185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/185/GCA_000629185.1_Pseu_aeru_3580_V1	-	3580
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2790	996830	PRJNA63757	63757	Spirochaetes	Spirochaetia	4.55279	35	-	AFKI01	253	4056	3731	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254335	GCA_000217095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/095/GCA_000217095.2_CLC_glsol115	-	Fiocruz LV2790
Streptococcus pyogenes SP2-LAU	1390077	PRJNA215877	215877	Terrabacteria group	Firmicutes	1.72794	38.4	-	AWOZ01	29	1717	1612	4/28/14	3/24/17	Contig	Lebanese American University	SAMN02741843	GCA_000648775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/775/GCA_000648775.1_Draft_SP2-LAU_Genome	24831139	SP2-LAU
Neisseria meningitidis 2005079	1145172	PRJNA83557	83557	Proteobacteria	Betaproteobacteria	2.11614	52	-	APUG01	131	2428	2098	5/1/13	3/15/17	Contig	IGS	SAMN01780122	GCA_000387045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/045/GCA_000387045.2_ASM38704v2	-	2005079
Helicobacter pylori Hp P-3	992074	PRJNA64175	64175	Proteobacteria	delta/epsilon subdivisions	1.65201	39.2	-	AKPK01	10	1619	1465	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778880	GCA_000274825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/825/GCA_000274825.2_ASM27482v2	23661595	Hp P-3
Streptococcus pneumoniae GA62681	1131629	PRJNA80869	80869	Terrabacteria group	Firmicutes	2.14008	39.7	-	ALCW01	14	2307	2051	7/18/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00792349	GCA_000279915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/915/GCA_000279915.1_ASM27991v1	-	GA62681
Campylobacter lari RM16712	1453988	PRJNA236389	236389	Proteobacteria	delta/epsilon subdivisions	1.56501	29.7	chromosome:NZ_CP007778.1/CP007778.1	-	1	1596	1513	1/7/15	4/2/17	Complete Genome	"USDA, ARS"	SAMN03248546	GCA_000816425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/425/GCA_000816425.1_ASM81642v1	25381664	RM16712
Mycobacterium tuberculosis MD17614	1447443	PRJNA234556	234556	Terrabacteria group	Actinobacteria	4.37775	65.6	-	JLGK01	88	4321	4112	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584594	GCA_000649935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/935/GCA_000649935.1_Myco_tube_MD17614_V1	-	MD17614
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.17873	35.4	-	MIFT01	74	5613	5316	12/21/16	3/28/17	Contig	"OARSA, CFSAN"	SAMN05608051	GCA_001913295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/295/GCA_001913295.1_ASM191329v1	-	MOD1_Bc119
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.71115	31.8	-	LZEP01	87	2794	2631	6/13/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN05215781	GCA_001662175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/175/GCA_001662175.1_ASM166217v1	-	LRKNS115
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	2.88751	37.9	-	JOXD01	16	2919	2818	7/15/14	2/26/17	Contig	Cornell University	SAMN02741485	GCA_000726155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/155/GCA_000726155.1_ASM72615v1	-	FSL R8-5487
Yersinia pestis CMCC99103	755953	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.40984	48	-	ADRQ01	1262	4243	3919	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403065	GCA_000324605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/605/GCA_000324605.1_ASM32460v1	23271803	CMCC99103
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.67233	30.5	-	CUNK01	20	1743	1649	3/31/15	3/18/17	Contig	SC	SAMEA1010334	GCA_001223885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/885/GCA_001223885.1_7065_7_60	-	OXC6408
Ehrlichia muris AS145	1423892	PRJNA228704	228704	Proteobacteria	Alphaproteobacteria	1.19672	29.7	chromosome:NC_023063.1/CP006917.1	-	1	941	874	12/16/13	4/9/17	Complete Genome	University of Texas Medical Branch	SAMN02641637	GCA_000508225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/225/GCA_000508225.1_ASM50822v1	24482514	AS145
Staphylococcus aureus M0250	1158518	PRJNA88945	88945	Terrabacteria group	Firmicutes	2.89569	32.9	-	AJCK01	2	3038	2872	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809170	GCA_000360565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/565/GCA_000360565.1_Stap_aure_M0250_V1	-	M0250
Staphylococcus aureus M0252	1157019	PRJNA88595	88595	Terrabacteria group	Firmicutes	2.80001	32.8	-	AIWF01	2	2889	2728	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792144	GCA_000360585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/585/GCA_000360585.1_Stap_aure_M0252_V1	-	M0252
Mycoplasma agalactiae PG2	347257	PRJNA16095	16095	Terrabacteria group	Tenericutes	0.877438	29.7	chromosome:NC_009497.1/CU179680.1	-	1	775	660	5/23/07	4/7/17	Complete Genome	Genoscope	SAMEA3138268	GCA_000063605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/063/605/GCA_000063605.1_ASM6360v1	-	PG2
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66655	30.4	-	CURY01	16	1754	1662	3/31/15	3/18/17	Contig	SC	SAMEA1010539	GCA_001223925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/925/GCA_001223925.1_7092_1_80	-	OXC6527
Yersinia pestis CMCCK100001	755954	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.52097	47.4	-	ADRR01	1406	4510	3990	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403066	GCA_000324625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/625/GCA_000324625.1_ASM32462v1	23271803	CMCCK100001
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.10365	37.8	-	JOWO01	41	3190	3079	7/15/14	2/26/17	Contig	Cornell University	SAMN02741469	GCA_000726175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/175/GCA_000726175.1_ASM72617v1	-	FSL R8-5108
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.70715	31.8	-	LZES01	84	2772	2620	6/13/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN05215978	GCA_001662225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/225/GCA_001662225.1_ASM166222v1	-	LRKNS118
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.33716	35.2	-	MIFL01	77	5787	5495	12/21/16	3/28/17	Contig	"OARSA, CFSAN"	SAMN05608038	GCA_001913375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/375/GCA_001913375.1_ASM191337v1	-	MOD1_Bc50
Mycobacterium tuberculosis MD17615	1447444	PRJNA234557	234557	Terrabacteria group	Actinobacteria	4.43072	65.6	-	JLGJ01	96	4347	4139	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584595	GCA_000649955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/955/GCA_000649955.1_Myco_tube_MD17615_V1	-	MD17615
Candidatus Pelagibacter ubique HTCC1062	335992	PRJNA13989	13989	Proteobacteria	Alphaproteobacteria	1.30876	29.7	chromosome:NC_007205.1/CP000084.1	-	1	1396	1337	7/22/05	3/29/17	Complete Genome	Oregon State University	SAMN02603690	GCA_000012345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/345/GCA_000012345.1_ASM1234v1	"1,610,988,016,267,550"	HTCC1062
Streptococcus pneumoniae GA58981	1131628	PRJNA80867	80867	Terrabacteria group	Firmicutes	2.2411	39.5	-	ALCX01	20	2440	2146	7/18/12	3/9/17	Contig	Institute for Genome Sciences	SAMN00792355	GCA_000279935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/935/GCA_000279935.1_ASM27993v1	-	GA58981
Helicobacter pylori Hp P-4	992075	PRJNA64177	64177	Proteobacteria	delta/epsilon subdivisions	1.69392	39.1	-	AKPL01	8	1649	1509	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778285	GCA_000274845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/845/GCA_000274845.2_ASM27484v2	23661595	Hp P-4
Neisseria meningitidis 2005040	1145174	PRJNA83561	83561	Proteobacteria	Betaproteobacteria	2.15067	52	-	APUI01	132	2503	2127	5/1/13	3/21/17	Contig	IGS	SAMN01780124	GCA_000387065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/065/GCA_000387065.2_ASM38706v2	-	2005040
Streptococcus pyogenes SP3-LAU	1390078	PRJNA215878	215878	Terrabacteria group	Firmicutes	1.74584	38.4	-	AWPA01	21	1778	1664	4/28/14	4/10/17	Contig	Lebanese American University	SAMN02741841	GCA_000648795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/795/GCA_000648795.1_Draft_SP3-LAU_Genome	24831139	SP3-LAU
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2787	996829	PRJNA63755	63755	Spirochaetes	Spirochaetia	4.555	35	-	AFKH01	251	4059	3743	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254334	GCA_000217115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/115/GCA_000217115.2_CLC_glsol114	-	Fiocruz LV2787
Pseudomonas aeruginosa 3579	1447534	PRJNA234690	234690	Proteobacteria	Gammaproteobacteria	6.73015	66.2	-	JIEH01	97	6541	6321	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02584692	GCA_000629205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/205/GCA_000629205.1_Pseu_aeru_3579_V1	-	3579
Acinetobacter baumannii AB_909-14-7	1221272	PRJNA172683	172683	Proteobacteria	Gammaproteobacteria	4.00632	38.8	-	AMIB01	584	4110	3681	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471254	GCA_000302095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/095/GCA_000302095.1_ASM30209v1	-	AB_909-14-7
Streptococcus agalactiae MRI Z1-217	1154880	PRJNA86419	86419	Terrabacteria group	Firmicutes	2.30168	35.4	-	ANEU01	104	2482	2237	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993316	GCA_000311325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/325/GCA_000311325.1_ASM31132v1	-	MRI Z1-217
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.25229	41	-	CEIS01	100	2266	2089	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234015	GCA_000945415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/415/GCA_000945415.1_Velvet_assembly	-	S15S
Pseudomonas syringae pv. actinidiae ICMP 19096	1194405	PRJNA167415	167415	Proteobacteria	Gammaproteobacteria	6.08007	58.4	-	AOKF01	4153	8011	7967	7/1/13	1/8/14	Scaffold	The New Zealand Institute for Plant & Food Research Limited	SAMN02470799	GCA_000416645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/645/GCA_000416645.2_ASM41664v2	-	ICMP 19096
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54107	38.3	-	FJIF01	64	3237	3085	2/20/16	3/27/17	Contig	SC	SAMEA2080692	GCA_900055605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/605/GCA_900055605.1_10625_3_11	-	2532STDY5467580
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.66894	50.7	-	CXEK01	478	5034	4522	7/16/15	2/24/17	Scaffold	SC	SAMEA954621	GCA_001248175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/175/GCA_001248175.1_5417_1_7	-	CS2_1361373
Burkholderia cenocepacia	95486	PRJEB16032	348497	Proteobacteria	Betaproteobacteria	7.49611	67	-	FNKW01	3	6975	6675	10/20/16	3/28/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05443026	GCA_900100915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/915/GCA_900100915.1_IMG-taxon_2690316368_annotated_assembly	-	TAtl-371
Burkholderia pseudomallei RNS7Bp6	1321259	PRJNA179436	179436	Proteobacteria	Betaproteobacteria	7.02523	68.2	-	ARZV01	233	7366	6760	11/18/15	3/27/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02044390	GCA_001446155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/155/GCA_001446155.1_ASM144615v1	26484663	RNS7Bp6
Vibrio cholerae PS15	693743	PRJNA83121	83121	Proteobacteria	Gammaproteobacteria	3.91039	47.6	-	AIJR01	131	3564	3473	12/10/12	3/23/17	Contig	National Center for Genome Resources	SAMN02470610	GCA_000318075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/075/GCA_000318075.1_Vibrio_cholerae_PS15	23409261	PS15
Clostridioides difficile CD86	1151276	PRJNA85725	85725	Terrabacteria group	Firmicutes	4.34743	28.2	-	AVHG01	156	4113	3885	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766627	GCA_000452405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/405/GCA_000452405.2_ASM45240v2	-	CD86
Vibrio parahaemolyticus S021	1394568	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.21293	45.3	-	AWMO01	551	5042	4781	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338882	GCA_000491755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/755/GCA_000491755.1_S021	-	S021
Klebsiella pneumoniae CHS 60	1438766	PRJNA234229	234229	Proteobacteria	Gammaproteobacteria	5.59106	57.1	-	JJNC01	106	5673	5416	4/15/14	2/21/17	Scaffold	Broad Institute	SAMN02581362	GCA_000633735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/735/GCA_000633735.1_Kleb_pneu_CHS_60_V1	-	CHS 60
Enterococcus faecalis EnGen0289	1158677	PRJNA89083	89083	Terrabacteria group	Firmicutes	2.91996	37.5	-	AJEY01	10	2951	2798	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809239	GCA_000395285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/285/GCA_000395285.1_Ente_faec_DS16_V1	-	DS16
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14683	52.4	-	CHKD01	73	2515	2188	4/21/15	4/11/17	Contig	SC	SAMEA1690495	GCA_001355355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/355/GCA_001355355.1_8727_8_1	-	GCGS097
Enterococcus faecium EnGen0377	1138939	PRJNA82529	82529	Terrabacteria group	Firmicutes	3.131	38.1	-	AHYQ01	15	3123	2893	5/31/13	4/10/17	Scaffold	Broad Institute	SAMN02596968	GCA_000407105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/105/GCA_000407105.1_Ente_faec_Efm_NY2-3_V1	-	EnGen0377
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.06463	41.4	-	CVXV01	73	2020	1839	6/24/15	3/26/17	Scaffold	SC	SAMEA1032786	GCA_001175585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/585/GCA_001175585.1_6817_2_86	-	EQUI0039
Campylobacter lari RM2100	306263	PRJNA12517	12517	Proteobacteria	delta/epsilon subdivisions	1.57166	29.6177	chromosome:NC_012039.1/CP000932.1; plasmid megaplasmid pCL2100:NC_012040.1/CP000933.1	-	2	1620	1539	2/5/09	4/10/17	Complete Genome	TIGR	SAMN02604025	GCA_000019205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/205/GCA_000019205.1_ASM1920v1	18713059	RM2100; ATCC BAA-1060D
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.09465	60.1	-	FCJF01	16	4831	4683	1/21/16	3/27/17	Scaffold	SC	SAMEA2273993	GCA_001539245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/245/GCA_001539245.1_12082_3_24	-	2880STDY5682921
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.73928	31.2	-	FBDT01	37	1838	1693	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683160	GCA_001487935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/935/GCA_001487935.1_SS_2252	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.04359	55.6	-	FJWF01	47	5029	4792	4/5/16	3/28/17	Scaffold	SC	SAMEA2273285	GCA_900075075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/075/GCA_900075075.1_11983_7_61	-	e1044
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.25279	64.2	-	FWDF01	39	5264	5113	3/16/17	3/24/17	Contig	SC	SAMEA2071437	GCA_900132335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/335/GCA_900132335.1_10665_4_64	-	319
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.84047	67	-	LPMJ01	215	7122	6722	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449669	GCA_001533965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/533/965/GCA_001533965.1_ASM153396v1	-	MSMB822WGS
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.07377	54.9	-	LRJP01	89	5042	4804	1/22/16	3/27/17	Contig	JCVI	SAMN04430997	GCA_001526085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/085/GCA_001526085.1_ASM152608v1	-	SMART_1361
Pseudomonas sp. BS-2016	1907766	PRJNA319672	319672	Proteobacteria	Gammaproteobacteria	5.14464	58.8	-	MLCT01	216	4834	4539	10/20/16	4/13/17	Contig	"University of Michigan, Ann Arbor"	SAMN05893015	GCA_001806145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/145/GCA_001806145.1_ASM180614v1	-	AU11048
Streptomyces sp. NRRL F-7442	1519498	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.59894	72.7	-	LGEH01	226	6769	6412	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900653	GCA_001279615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/615/GCA_001279615.1_ASM127961v1	-	NRRL F-7442
Bacillus sp. WBUNB009	1209372	PRJNA177929	177929	Terrabacteria group	Firmicutes	5.86874	34.9	-	ANFK01	289	-	-	12/12/12	1/8/14	Contig	West bengal University of Technology	SAMN02472121	GCA_000319735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/735/GCA_000319735.1_WBUNB009ver01	23469363	WBUNB009
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.15046	27	-	FMGR01	38	3158	3112	8/16/16	8/16/16	Scaffold	SC	SAMEA3545414	GCA_900066925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/925/GCA_900066925.1_14207_7_74	-	-
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.14774	26.9	-	FMGS01	44	3132	3097	8/16/16	8/16/16	Scaffold	SC	SAMEA3545415	GCA_900066935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/935/GCA_900066935.1_14207_7_75	-	-
Bacillus sp. WBUNB004	1209364	PRJNA177932	177932	Terrabacteria group	Firmicutes	5.46516	35	-	ANGA01	127	-	-	12/12/12	1/8/14	Contig	West bengal University of Technology	SAMN02472125	GCA_000319755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/755/GCA_000319755.1_WBUNB004ver01	23469361	WBUNB004
Streptomyces sp. WM6368	1415554	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.21286	72.2	-	LGDA01	324	7382	7026	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900616	GCA_001279625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/625/GCA_001279625.1_ASM127962v1	-	WM6368
Pseudomonas sp. 06C 126	1917281	PRJNA341716	341716	Proteobacteria	Gammaproteobacteria	6.03227	60.6	-	MIFU01	161	5477	5320	10/27/16	4/13/17	Contig	University of Michigan	SAMN05727803	GCA_001855215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/215/GCA_001855215.1_ASM185521v1	-	06C 126
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.07582	54.9	-	LRJN01	89	4964	4756	1/22/16	3/27/17	Contig	JCVI	SAMN04430999	GCA_001526105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/105/GCA_001526105.1_ASM152610v1	-	SMART_1286
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.68407	67.2	-	LPML01	336	6990	6507	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449671	GCA_001534005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/005/GCA_001534005.1_ASM153400v1	-	MSMB834WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.04499	64.2	-	FVFB01	31	5040	4897	3/10/17	3/18/17	Contig	SC	SAMEA2070667	GCA_900132365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/365/GCA_900132365.1_10665_4_68	-	323
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.06834	55.1	-	FJXO01	57	5013	4765	4/5/16	3/28/17	Scaffold	SC	SAMEA2273117	GCA_900075085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/085/GCA_900075085.1_11983_5_92	-	e11
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.78239	31.3	-	FBQY01	1	1826	1702	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683223	GCA_001487955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/955/GCA_001487955.1_N11D1	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.09718	60	-	FCHK01	16	4878	4719	1/21/16	3/27/17	Scaffold	SC	SAMEA2273927	GCA_001539265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/265/GCA_001539265.1_12082_2_61	-	2880STDY5682854
Leptotrichia sp. oral taxon 498	712368	PRJNA282954	282954	Fusobacteria	Fusobacteriia	2.15218	29.6	chromosome:NZ_CP016753.1/CP016753.1	-	1	2090	1943	8/2/17	8/4/17	Complete Genome	The Forsyth Institute	SAMN05413925	GCA_002240055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/055/GCA_002240055.1_ASM224005v1	-	F0590
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.13983	41.2	-	CWAP01	92	2053	1883	6/24/15	3/26/17	Scaffold	SC	SAMEA1032801	GCA_001175805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/805/GCA_001175805.1_6903_3_41	-	EQUI0090
Enterococcus faecium EnGen0376	1138938	PRJNA191894	191894	Terrabacteria group	Firmicutes	3.11529	37.7	-	ASWR01	16	3223	3006	5/31/13	3/24/17	Scaffold	Broad Institute	SAMN02596967	GCA_000407325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/325/GCA_000407325.1_Ente_faec_Efm_NY2-2_V2	-	EnGen0376
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14855	52.4	-	CHZK01	72	2510	2191	4/21/15	4/11/17	Contig	SC	SAMEA1690508	GCA_001355375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/375/GCA_001355375.1_8727_8_47	-	GCGS143
Enterococcus faecalis EnGen0285	1158678	PRJNA89085	89085	Terrabacteria group	Firmicutes	3.153	37.4	-	AJEZ01	21	3245	3067	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809240	GCA_000395305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/305/GCA_000395305.1_Ente_faec_RC73_V1	-	RC73
Klebsiella pneumoniae CHS 47	1438753	PRJNA234216	234216	Proteobacteria	Gammaproteobacteria	5.56125	57.1	-	JJND01	141	5705	5441	4/15/14	2/21/17	Scaffold	Broad Institute	SAMN02581349	GCA_000633755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/755/GCA_000633755.1_Kleb_pneu_CHS_47_V1	-	CHS 47
Vibrio parahaemolyticus S020	1394567	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.18287	45.2	-	AWMP01	421	4993	4766	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338881	GCA_000491775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/775/GCA_000491775.1_S020	-	S020
Clostridioides difficile CD88	1151277	PRJNA85727	85727	Terrabacteria group	Firmicutes	4.23689	28.3	-	AVHH01	130	4017	3796	8/20/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766628	GCA_000452425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/425/GCA_000452425.2_ASM45242v2	-	CD88
Vibrio cholerae HC-7A1	991931	PRJNA63869	63869	Proteobacteria	Gammaproteobacteria	4.07492	47.5	-	AGVA02	12	3912	3713	12/10/12	3/23/17	Contig	Institute for Genome Sciences	SAMN02435825	GCA_000318485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/485/GCA_000318485.2_ASM31848v2	-	HC-7A1
Burkholderia pseudomallei Songkhla34W2	1321260	PRJNA179436	179436	Proteobacteria	Betaproteobacteria	7.09263	68.2	-	ARZW01	219	7415	6878	11/18/15	3/27/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02044391	GCA_001446175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/175/GCA_001446175.1_ASM144617v1	26484663	Songkhla34W2
Burkholderia cenocepacia	95486	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	8.07547	66.8	-	JVCR01	168	7627	7169	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197745	GCA_001055325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/325/GCA_001055325.1_ASM105532v1	26230489	547_BMUL
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.82458	50.7	-	CWVT01	416	5482	4645	7/16/15	2/24/17	Scaffold	SC	SAMEA3345082	GCA_001248215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/215/GCA_001248215.1_Sg_201401278_GTAGAG_L001	-	201401278_1
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54085	38.3	-	FJIH01	62	3240	3091	2/20/16	3/27/17	Contig	SC	SAMEA2080684	GCA_900055615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/615/GCA_900055615.1_10625_2_80	-	2532STDY5467553
Pseudomonas syringae pv. actinidiae ICMP 18804	1104682	PRJNA167425	167425	Proteobacteria	Gammaproteobacteria	4.71375	57.1	-	AOJU01	4132	7981	7929	7/1/13	1/8/14	Scaffold	The New Zealand Institute for Plant & Food Research Limited	SAMN02470796	GCA_000416905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/905/GCA_000416905.2_ASM41690v2	-	ICMP 18804
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.34587	41.5	-	CEHJ01	390	2264	2098	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233948	GCA_000945455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/455/GCA_000945455.1_Velvet_assembly	-	LS8F
Streptococcus agalactiae LDS 610	1154883	PRJNA86425	86425	Terrabacteria group	Firmicutes	2.01607	35.5	-	ANEW01	169	2201	1908	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993324	GCA_000311345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/345/GCA_000311345.1_ASM31134v1	-	LDS 610
Acinetobacter baumannii AB_TG19617	1221273	PRJNA172685	172685	Proteobacteria	Gammaproteobacteria	3.89059	38.9	-	AMID01	59	3735	3609	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471228	GCA_000302135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/135/GCA_000302135.1_ASM30213v1	-	AB_TG19617
Pseudomonas aeruginosa 3578	1447533	PRJNA234689	234689	Proteobacteria	Gammaproteobacteria	6.7366	66.2	-	JIEI01	112	6565	6322	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02584691	GCA_000629225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/225/GCA_000629225.1_Pseu_aeru_3578_V1	-	3578
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2776	996828	PRJNA63753	63753	Spirochaetes	Spirochaetia	4.55288	35	-	AFKG01	248	4060	3736	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254333	GCA_000217135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/135/GCA_000217135.2_CLC_glsol112	-	Fiocruz LV2776
Streptococcus pyogenes SP4-LAU	1390079	PRJNA215879	215879	Terrabacteria group	Firmicutes	1.90637	38.2	-	AWPB01	28	1954	1832	4/28/14	3/24/17	Contig	Lebanese American University	SAMN02741839	GCA_000648815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/815/GCA_000648815.1_Draft_SP4-LAU_Genome	24831139	SP4-LAU
Neisseria meningitidis 2002004	1145175	PRJNA83563	83563	Proteobacteria	Betaproteobacteria	2.25148	51.9	-	APUJ01	136	2626	2233	5/1/13	3/15/17	Contig	IGS	SAMN01780125	GCA_000387085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/085/GCA_000387085.2_ASM38708v2	-	2002004
Helicobacter pylori Hp M3	992119	PRJNA64265	64265	Proteobacteria	delta/epsilon subdivisions	1.67152	39.2	-	AKQP01	9	1642	1470	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778918	GCA_000274885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/885/GCA_000274885.2_ASM27488v2	-	Hp M3
Streptococcus pneumoniae Sp647	1367480	PRJNA212768	212768	Terrabacteria group	Firmicutes	2.16694	39.5	-	AUYL01	95	2389	2124	9/17/13	3/15/17	Contig	Center for Genomic Sciences	SAMN02393756	GCA_000468195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/195/GCA_000468195.1_CGSSp647	-	Sp647
Campylobacter sputorum bv. paraureolyticus LMG 11764	1032066	PRJNA66807	66807	Proteobacteria	delta/epsilon subdivisions	1.72502	29.6	chromosome:NZ_CP019684.1/CP019684.1	-	1	1756	1677	7/18/17	7/21/17	Complete Genome	"USDA, ARS, WRRC"	SAMN03737990	GCA_002220755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/755/GCA_002220755.1_ASM222075v1	28633450	LMG 17589
Mycobacterium tuberculosis MD17748	1447446	PRJNA234559	234559	Terrabacteria group	Actinobacteria	4.38861	65.6	-	JLGH01	86	4325	4107	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584597	GCA_000649975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/975/GCA_000649975.1_Myco_tube_MD17748_V1	-	MD17748
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.63898	34.8	-	MIFK01	123	5964	5545	12/21/16	3/28/17	Contig	"OARSA, CFSAN"	SAMN05415286	GCA_001913405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/405/GCA_001913405.1_ASM191340v1	-	MOD1_Bc23
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.69675	31.8	-	LYYX01	83	2763	2613	6/15/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04942521	GCA_001662985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/985/GCA_001662985.1_ASM166298v1	-	LRKNS111
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	2.90645	37.9	-	JOWJ01	13	2957	2874	7/15/14	2/26/17	Contig	Cornell University	SAMN02741464	GCA_000726185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/185/GCA_000726185.1_ASM72618v1	-	FSL N3-0993
Yersinia pestis CMCCK110001	755955	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.30525	48.1	-	ADRS01	1385	4129	3743	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403067	GCA_000324645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/645/GCA_000324645.1_ASM32464v1	23271803	CMCCK110001
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.6931	30.4	-	CUJN01	31	1802	1710	3/31/15	3/18/17	Contig	SC	SAMEA1010461	GCA_001224005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/005/GCA_001224005.1_7038_3_55	-	OXC6305
Spiroplasma clarkii	2139	PRJNA303055	303055	Terrabacteria group	Tenericutes	1.55845	29.6	chromosome:CP015819.1	-	1	1702	1480	6/2/17	6/2/17	Complete Genome	Beltsville Agricultural Research Center	SAMN04285339	GCA_002163565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/565/GCA_002163565.1_ASM216356v1	-	CN-5
Staphylococcus aureus M0270	1224924	PRJNA173472	173472	Terrabacteria group	Firmicutes	2.93518	32.9	-	ANZO01	13	3112	2941	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN01125837	GCA_000360605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/605/GCA_000360605.1_Stap_aure_M0270_V1	-	M0270
Staphylococcus aureus M0273	1224925	PRJNA173473	173473	Terrabacteria group	Firmicutes	2.89168	33	-	ANZP01	7	3002	2848	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN01125838	GCA_000360625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/625/GCA_000360625.1_Stap_aure_M0273_V1	-	M0273
Polaribacter vadi	1774273	PRJNA341555	341555	FCB group	Bacteroidetes/Chlorobi group	3.80931	29.6	chromosome:NZ_CP017477.1/CP017477.1	-	1	3300	3223	10/12/16	4/13/17	Complete Genome	Korea University	SAMN05726018	GCA_001761365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/365/GCA_001761365.1_ASM176136v1	-	LPB0003
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.72405	30.3	-	CUMQ01	15	1827	1716	3/31/15	3/18/17	Contig	SC	SAMEA1010514	GCA_001224025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/025/GCA_001224025.1_7065_7_41	-	OXC6387
Yersinia pestis CMCCN010025	755956	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.43791	47.8	-	ADRT01	1016	4215	3887	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403068	GCA_000324665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/665/GCA_000324665.1_ASM32466v1	23271803	CMCCN010025
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09762	37.7	-	JOWM01	30	3204	3098	7/15/14	2/26/17	Contig	Cornell University	SAMN02741467	GCA_000726225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/225/GCA_000726225.1_ASM72622v1	-	FSL R8-5095
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.78476	31.8	-	LYYZ01	97	2849	2702	6/15/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04942527	GCA_001663015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/015/GCA_001663015.1_ASM166301v1	-	LRKNS113
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	6.13935	34.8	-	MIFJ01	269	6586	6128	12/21/16	3/28/17	Contig	"OARSA, CFSAN"	SAMN05415285	GCA_001913455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/455/GCA_001913455.1_ASM191345v1	-	MOD1_Bc21
Mycobacterium tuberculosis MD19043	1447447	PRJNA234560	234560	Terrabacteria group	Actinobacteria	4.37466	65.6	-	JLGG01	98	4327	4108	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584598	GCA_000649995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/995/GCA_000649995.1_Myco_tube_MD19043_V1	-	MD19043
Clostridium scatologenes	1548	PRJNA265889	265889	Terrabacteria group	Firmicutes	5.74941	29.6	chromosome:NZ_CP009933.1/CP009933.1	-	1	5221	4984	4/2/15	4/10/17	Complete Genome	Nanjing Tech University	SAMN02721231	GCA_000968375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/375/GCA_000968375.1_ASM96837v1	26210291	ATCC 25775
Streptococcus pneumoniae B605	1367211	PRJNA212626	212626	Terrabacteria group	Firmicutes	2.05368	39.6	-	AUVA01	70	2246	2011	9/17/13	3/9/17	Contig	Allegheny Research Institute	SAMN02393753	GCA_000468275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/275/GCA_000468275.1_CGSSpB605	-	B605
Helicobacter pylori NQ4200	992024	PRJNA64075	64075	Proteobacteria	delta/epsilon subdivisions	1.64674	39	-	AKNS01	14	1599	1439	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00777289	GCA_000274905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/905/GCA_000274905.1_ASM27490v1	23661595	NQ4200
Neisseria meningitidis 2005172	1145179	PRJNA83571	83571	Proteobacteria	Betaproteobacteria	2.17793	52	-	APUN01	144	2534	2135	5/1/13	3/21/17	Contig	IGS	SAMN01780129	GCA_000387105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/105/GCA_000387105.2_ASM38710v2	-	2005172
Streptococcus pyogenes SP5-LAU	1390080	PRJNA215882	215882	Terrabacteria group	Firmicutes	1.81275	38.4	-	AWPC01	25	1870	1764	4/28/14	3/27/17	Contig	Lebanese American University	SAMN02741844	GCA_000648835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/835/GCA_000648835.2_Draft_SP5-LAU_Genome	24831139	SP5-LAU
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2772	996827	PRJNA63751	63751	Spirochaetes	Spirochaetia	4.55275	35	-	AFKF01	245	4050	3731	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254332	GCA_000217155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/155/GCA_000217155.2_CLC_glsol111	-	Fiocruz LV2772
Pseudomonas aeruginosa 3577	1447532	PRJNA234688	234688	Proteobacteria	Gammaproteobacteria	6.42485	66.4	-	JIEJ01	57	6153	5979	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02584690	GCA_000629245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/245/GCA_000629245.1_Pseu_aeru_3577_V1	-	3577
Acinetobacter baumannii AB_TG2018	1221274	PRJNA172686	172686	Proteobacteria	Gammaproteobacteria	3.9752	39.1	-	AMIE01	147	3850	3695	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471238	GCA_000302155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/155/GCA_000302155.1_ASM30215v1	-	AB_TG2018
Streptococcus agalactiae BSU260	1105231	PRJNA86307	86307	Terrabacteria group	Firmicutes	2.17784	35.3	-	ANEC01	31	2261	2162	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991138	GCA_000311365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/365/GCA_000311365.1_ASM31136v1	-	BSU260
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.26037	41	-	CEGV01	124	2263	2099	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234099	GCA_000945495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/495/GCA_000945495.1_Velvet_assembly	-	S99Z
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.53798	38.3	-	FJJY01	60	3232	3085	2/20/16	3/27/17	Contig	SC	SAMEA1966965	GCA_900055625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/625/GCA_900055625.1_10625_3_2	-	2532STDY5467571
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.40703	50.8	-	CXDO01	376	4709	4209	7/16/15	2/24/17	Scaffold	SC	SAMEA954807	GCA_001248255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/255/GCA_001248255.1_5236_8_2	-	Sh989560_441090
Burkholderia cenocepacia	95486	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	7.91947	66.9	-	JVLD01	555	7657	7001	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197525	GCA_001056365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/365/GCA_001056365.1_ASM105636v1	26230489	335_BMUL
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.07273	68.1	-	LXGX01	351	7407	6745	5/4/16	3/28/17	Contig	Northern Arizona University	SAMN04208691	GCA_001637005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/005/GCA_001637005.1_Bp4100_assembly	-	NAU33A-5
Vibrio cholerae HC-81A1	991936	PRJNA63879	63879	Proteobacteria	Gammaproteobacteria	4.08402	47.5	-	AGVC02	16	3930	3721	12/10/12	3/23/17	Contig	Institute for Genome Sciences	SAMN02435810	GCA_000318505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/505/GCA_000318505.2_ASM31850v2	-	HC-81A1
Clostridioides difficile DA00130	1151324	PRJNA85823	85823	Terrabacteria group	Firmicutes	4.08032	28.4	-	AWZH01	140	3839	3616	9/30/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766638	GCA_000473565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/565/GCA_000473565.2_ASM47356v2	-	DA00130
Vibrio parahaemolyticus S019	1394566	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.07925	45.2	-	AWMQ01	466	4839	4591	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338880	GCA_000491795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/795/GCA_000491795.1_S019	-	S019
Klebsiella pneumoniae CHS 42	1438748	PRJNA234211	234211	Proteobacteria	Gammaproteobacteria	5.78801	57	-	JJNE01	161	5896	5622	4/15/14	2/21/17	Scaffold	Broad Institute	SAMN02581344	GCA_000633775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/775/GCA_000633775.1_Kleb_pneu_CHS_42_V1	-	CHS 42
Enterococcus faecalis EnGen0335	1169252	PRJNA158757	158757	Terrabacteria group	Firmicutes	3.22406	37.6	-	ASEO01	18	3353	3137	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00839772	GCA_000395365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/365/GCA_000395365.1_Ente_faec_SF5039_V1	-	SF5039
Neisseria gonorrhoeae	485	PRJNA305360	305360	Proteobacteria	Betaproteobacteria	2.12191	52.5	-	LOIB01	135	2489	2155	2/18/16	4/10/17	Contig	Orebro University Hospital	SAMN04325036	GCA_001563755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/755/GCA_001563755.1_ASM156375v1	-	H15_353
Enterococcus faecium EnGen0377	1138939	PRJNA191895	191895	Terrabacteria group	Firmicutes	3.13438	37.7	-	ASWS01	13	3223	2999	5/31/13	3/24/17	Scaffold	Broad Institute	SAMN02596968	GCA_000407345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/345/GCA_000407345.1_Ente_faec_Efm_NY2-3_V2	-	EnGen0377
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.14975	41.2	-	CWDM01	84	2091	1909	6/24/15	3/26/17	Scaffold	SC	SAMEA1032809	GCA_001175945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/945/GCA_001175945.1_6903_7_26	-	EQUI0171
Ehrlichia sp. HF	391036	PRJNA187357	187357	Proteobacteria	Alphaproteobacteria	1.1489	29.6	chromosome:NZ_CP007474.1/CP007474.1	-	1	920	866	4/17/14	4/17/17	Complete Genome	IGS	SAMN02367296	GCA_000632845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/845/GCA_000632845.1_ASM63284v1	-	HF
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.10837	60.1	-	FCJP01	36	4809	4646	1/21/16	3/27/17	Scaffold	SC	SAMEA2274008	GCA_001539285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/285/GCA_001539285.1_12082_3_37	-	2880STDY5682936
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75038	31.2	-	FAZJ01	21	1833	1746	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683043	GCA_001487975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/975/GCA_001487975.1_EC4194	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.08977	55.3	-	FJWP01	33	4985	4774	4/5/16	3/28/17	Scaffold	SC	SAMEA2273314	GCA_900075095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/095/GCA_900075095.1_11983_7_90	-	e1238
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.11829	64.1	-	FVFE01	15	5205	5026	3/10/17	3/18/17	Contig	SC	SAMEA2068810	GCA_900132375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/375/GCA_900132375.1_10665_4_69	-	324
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.58246	67.2	-	LPMQ01	76	6885	6572	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449676	GCA_001534065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/065/GCA_001534065.1_ASM153406v1	-	MSMB842WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.26111	55.2	-	LRJS01	110	5285	5009	1/22/16	3/27/17	Contig	JCVI	SAMN04430994	GCA_001526115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/115/GCA_001526115.1_ASM152611v1	-	SMART_1351
Pseudomonas sp. FSL W5-0203	1920491	PRJNA350783	350783	Proteobacteria	Gammaproteobacteria	6.28473	59.7	-	MPOR01	114	5804	5623	12/9/16	4/16/17	Contig	Cornell University	SAMN05949013	GCA_001896155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/155/GCA_001896155.1_ASM189615v1	-	FSL W5-0203
Streptomyces sp. WM6372	1415555	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.7632	72.1	-	LGDB01	259	7919	7457	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900617	GCA_001279655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/655/GCA_001279655.1_ASM127965v1	-	WM6372
Bacillus sp. JGI 001005-J19	1167731	PRJNA177737	177737	Terrabacteria group	Firmicutes	1.13906	32.8	-	ATZK02	85	-	-	7/15/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441213	GCA_000428165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/165/GCA_000428165.2_ASM42816v2	-	JGI 001005-J19
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	8.7629	35.6	-	FMGT01	132	8241	8131	8/16/16	8/16/16	Scaffold	SC	SAMEA3545416	GCA_900066945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/945/GCA_900066945.1_14207_7_76	-	-
uncultured Clostridium sp.	59620	PRJEB10915	297013	Terrabacteria group	Firmicutes	3.84768	27.9	-	FMGV01	90	3702	3623	8/16/16	8/16/16	Scaffold	SC	SAMEA3545417	GCA_900066955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/066/955/GCA_900066955.1_14207_7_77	-	-
Bacillus sp. JGI 001011-F15	1167732	PRJNA179467	179467	Terrabacteria group	Firmicutes	1.58614	33.4	-	ATZW02	162	-	-	7/15/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440885	GCA_000428405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/428/405/GCA_000428405.2_ASM42840v2	-	JGI 001011-F15
Streptomyces sp. WM6373	1415556	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.26939	72.4	-	LGDC01	260	7531	7135	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900618	GCA_001279685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/685/GCA_001279685.1_ASM127968v1	-	WM6373
Pseudomonas sp. BTN1	1750647	PRJNA350615	350615	Proteobacteria	Gammaproteobacteria	6.11088	60.1	-	MPBM01	78	5696	5506	12/17/16	4/16/17	Contig	Institute of Protein Biochemistry	SAMN05967369	GCA_001907715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/715/GCA_001907715.1_ASM190771v1	-	BTN1
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.07312	54.9	-	LRJM01	79	4952	4764	1/22/16	3/27/17	Contig	JCVI	SAMN04431000	GCA_001526145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/145/GCA_001526145.1_ASM152614v1	-	SMART_1287
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.53097	67.3	-	LPKW01	107	6801	6458	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449629	GCA_001534115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/115/GCA_001534115.1_ASM153411v1	-	MSMB702WGS
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.11711	64.1	-	FVFF01	14	5202	5024	3/10/17	3/18/17	Contig	SC	SAMEA2070668	GCA_900132385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/385/GCA_900132385.1_10665_4_71	-	326
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.94001	55.1	-	FJWM01	59	4866	4613	4/5/16	3/28/17	Scaffold	SC	SAMEA2273507	GCA_900075105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/105/GCA_900075105.1_12045_5_78	-	e1227
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.64266	31.4	-	FBLR01	34	1705	1601	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683373	GCA_001487995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/995/GCA_001487995.1_UNNQFC9	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.1277	59.9	-	FCFH01	23	4859	4711	1/21/16	3/27/17	Scaffold	SC	SAMEA2274078	GCA_001539305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/305/GCA_001539305.1_12045_8_2	-	2880STDY5683007
Mycoplasma agalactiae	2110	PRJEA16096	16096	Terrabacteria group	Tenericutes	1.0067	29.6	chromosome:NC_013948.1/FP671138.1	-	1	870	810	3/5/10	4/7/17	Complete Genome	Genoscope	SAMEA2272074	GCA_000089865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/089/865/GCA_000089865.1_ASM8986v1	-	5632
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.167	41.2	-	CWCQ01	111	2111	1905	6/24/15	3/26/17	Scaffold	SC	SAMEA1032812	GCA_001176005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/005/GCA_001176005.1_6903_5_95	-	EQUI0145
Enterococcus faecium LCT-EF297	1302647	PRJNA192523	192523	Terrabacteria group	Firmicutes	2.66815	38.3	-	APJQ01	15	2639	2484	6/13/13	3/24/17	Scaffold	BGI-Shenzhen	SAMN02469382	GCA_000411015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/015/GCA_000411015.1_Version_1_for_Enterococcus_faecium_Strain_LCT-EF297_genome	24558244	LCT-EF297
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.12047	52.5	-	MBAJ01	190	2457	2161	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04852964	GCA_001858595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/595/GCA_001858595.1_ASM185859v1	-	USO_DK09-063
Enterococcus faecalis EnGen0290	1158674	PRJNA89077	89077	Terrabacteria group	Firmicutes	3.06524	37.5	-	AJEV01	12	3123	2951	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809236	GCA_000395385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/385/GCA_000395385.1_Ente_faec_RM3817_V1	-	RM3817
Klebsiella pneumoniae	573	PRJEB4159	215060	Proteobacteria	Gammaproteobacteria	5.65817	57	-	CCBO01	11	5645	5385	4/10/14	2/21/17	Scaffold	Genoscope CEA	SAMEA3139002	GCA_000689275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/275/GCA_000689275.1_AFX_PRJEB4159_v1	-	SB2390
Vibrio parahaemolyticus S018	1394565	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.15893	45.2	-	AWMR01	729	4966	4649	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338879	GCA_000491815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/815/GCA_000491815.1_S018	-	S018
Clostridioides difficile P33	1151415	PRJNA86005	86005	Terrabacteria group	Firmicutes	4.10343	28.6	-	AWZI01	57	3826	3625	9/30/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766704	GCA_000473585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/585/GCA_000473585.2_ASM47358v2	-	P33
Vibrio cholerae 4260B	1236549	PRJNA176181	176181	Proteobacteria	Gammaproteobacteria	4.03922	47.6	-	AMVL01	40	3798	3665	1/3/13	3/23/17	Contig	International Vaccine Institute	SAMN02470062	GCA_000330905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/905/GCA_000330905.1_VC4260B	-	4260B
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.0617	68.2	-	LXGW01	179	7340	6781	5/4/16	3/28/17	Contig	Northern Arizona University	SAMN04208686	GCA_001637015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/015/GCA_001637015.1_Bp4079_assembly	-	NAU21B-13
Burkholderia cenocepacia	95486	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	7.95792	66.9	-	JVLJ01	414	7625	7061	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197519	GCA_001056375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/375/GCA_001056375.1_ASM105637v1	26230489	33_BMUL
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.68897	50.7	-	CWYI01	386	5225	4498	7/16/15	2/24/17	Scaffold	SC	SAMEA2445710	GCA_001248275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/275/GCA_001248275.1_12971_8_29	-	H093660484
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54262	38.3	-	FJLC01	63	3241	3092	2/20/16	3/27/17	Contig	SC	SAMEA2080699	GCA_900055635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/635/GCA_900055635.1_10625_3_38	-	2532STDY5467607
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.39794	41.5	-	CEJM01	336	2339	2183	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233961	GCA_000945515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/515/GCA_000945515.1_Velvet_assembly	-	LS9U
Streptococcus agalactiae BSU451	1105232	PRJNA86309	86309	Terrabacteria group	Firmicutes	2.08764	35.5	-	ANED01	16	2145	2047	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991131	GCA_000311385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/385/GCA_000311385.1_ASM31138v1	-	BSU451
Acinetobacter baumannii AB_TG2032	1221281	PRJNA172693	172693	Proteobacteria	Gammaproteobacteria	3.55715	39.5	-	AMIL01	353	3433	3239	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471265	GCA_000302175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/175/GCA_000302175.1_ASM30217v1	-	AB_TG2032
Pseudomonas aeruginosa 3576	1447531	PRJNA234687	234687	Proteobacteria	Gammaproteobacteria	6.70664	66.2	-	JIEK01	87	6498	6284	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02584689	GCA_000629265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/265/GCA_000629265.1_Pseu_aeru_3576_V1	-	3576
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2767	996825	PRJNA63747	63747	Spirochaetes	Spirochaetia	4.55242	35	-	AFKD01	257	4047	3720	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254330	GCA_000217195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/195/GCA_000217195.2_CLC_glsol109	-	Fiocruz LV2767
Streptococcus pyogenes SP6-LAU	1390081	PRJNA215883	215883	Terrabacteria group	Firmicutes	1.73355	38.4	-	AWPD01	19	1736	1638	4/28/14	4/10/17	Contig	Lebanese American University	SAMN02741840	GCA_000648855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/855/GCA_000648855.1_Draft_SP6-LAU_Genome	24831139	SP6-LAU
Neisseria meningitidis 2008223	1145180	PRJNA83573	83573	Proteobacteria	Betaproteobacteria	2.17506	52	-	APUO01	130	2544	2135	5/1/13	3/21/17	Contig	IGS	SAMN01780130	GCA_000387125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/125/GCA_000387125.2_ASM38712v2	-	2008223
Helicobacter pylori NQ4228	992025	PRJNA64077	64077	Proteobacteria	delta/epsilon subdivisions	1.65328	39	-	AKNT01	6	1618	1475	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00777291	GCA_000274925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/925/GCA_000274925.1_ASM27492v1	23661595	NQ4228
Streptococcus pneumoniae WL677	1367214	PRJNA212625	212625	Terrabacteria group	Firmicutes	2.08583	39.5	-	AUWZ01	49	2266	2068	9/17/13	3/9/17	Contig	Allegheny Research Institute	SAMN02393752	GCA_000468295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/295/GCA_000468295.1_CGSSpWL677	-	WL677
Leptotrichia buccalis C-1013-b	523794	PRJNA29445	29445	Fusobacteria	Fusobacteriia	2.46561	29.6	chromosome:NC_013192.1/CP001685.1	-	1	2323	2187	9/1/09	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002593	GCA_000023905.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/905/GCA_000023905.1_ASM2390v1	21304648	DSM 1135
Mycobacterium tuberculosis MD20845	1447449	PRJNA234562	234562	Terrabacteria group	Actinobacteria	4.40659	65.5	-	JLGE01	92	4350	4136	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584600	GCA_000650015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/015/GCA_000650015.1_Myco_tube_MD20845_V1	-	MD20845
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.4593	35.1	-	MIFR01	214	5881	5523	12/21/16	3/28/17	Contig	"OARSA, CFSAN"	SAMN05415284	GCA_001913615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/615/GCA_001913615.1_ASM191361v1	-	MOD1_Bc18
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.68152	31.8	-	LYYY01	91	2758	2596	6/15/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04942524	GCA_001663025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/025/GCA_001663025.1_ASM166302v1	-	LRKNS112
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.05749	37.8	-	JOWR01	32	3122	3019	7/15/14	2/26/17	Contig	Cornell University	SAMN02741472	GCA_000726235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/235/GCA_000726235.1_ASM72623v1	-	FSL R8-5124
Yersinia pestis D1964001	755882	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.38946	47.5	-	ADRU01	1012	4241	3925	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403069	GCA_000324685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/685/GCA_000324685.1_ASM32468v1	23271803	D1964001
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.78534	30.1	-	CUHT01	22	1894	1735	3/31/15	3/18/17	Contig	SC	SAMEA1010416	GCA_001224205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/205/GCA_001224205.1_7038_3_13	-	OXC6262
Candidatus Blochmannia pennsylvanicus str. BPEN	291272	PRJNA13875	13875	Proteobacteria	Gammaproteobacteria	0.791654	29.6	chromosome:NC_007292.1/CP000016.1	-	1	659	610	8/4/05	4/17/17	Complete Genome	Josephine Bay Paul Center	SAMN02603465	GCA_000011745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/745/GCA_000011745.1_ASM1174v1	16077009	BPEN
Staphylococcus aureus M0279	1224926	PRJNA173474	173474	Terrabacteria group	Firmicutes	2.88082	32.9	-	ANZQ01	4	3009	2851	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN01125839	GCA_000360645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/645/GCA_000360645.1_Stap_aure_M0279_V1	-	M0279
Staphylococcus aureus M0280	1158520	PRJNA88949	88949	Terrabacteria group	Firmicutes	2.93433	32.9	-	AJCM01	12	3094	2931	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809172	GCA_000360665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/665/GCA_000360665.1_Stap_aure_M0280_V1	-	M0280
Spiroplasma sp. MT37	1963034	PRJNA376231	376231	Terrabacteria group	Tenericutes	0.424539	29.5356	chromosome 1:CP022928.1; chromosome 2:CP022929.1	-	2	-	-	8/14/17	8/24/17	Complete Genome	"Institute of Deep-sea Science and Engineering, Chinese Academy of Sciences"	SAMN06368401	GCA_002135175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/175/GCA_002135175.2_ASM213517v2	-	-
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.67596	30.3	-	CUHX01	20	1761	1670	3/31/15	3/18/17	Contig	SC	SAMEA1010363	GCA_001224265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/265/GCA_001224265.1_7038_3_17	-	OXC6266
Yersinia pestis D1964002	755911	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.43185	47.6	-	ADRV01	1555	4334	3818	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403070	GCA_000324705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/705/GCA_000324705.1_ASM32470v1	23271803	D1964002
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.04484	37.9	-	JOWP01	34	3082	2995	7/15/14	2/26/17	Contig	Cornell University	SAMN02741470	GCA_000726265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/265/GCA_000726265.1_ASM72626v1	-	FSL R8-5112
Staphylococcus epidermidis	1282	PRJNA319644	319644	Terrabacteria group	Firmicutes	2.44442	32.1	-	MAJJ01	79	2389	2258	7/12/16	3/28/17	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN05293479	GCA_001683645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/645/GCA_001683645.1_ASM168364v1	-	Mt1p16
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.27747	35.1	-	MIFP01	66	5497	5235	12/21/16	3/28/17	Contig	"OARSA, CFSAN"	SAMN05608061	GCA_001913625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/625/GCA_001913625.1_ASM191362v1	-	MOD1_Bc77
Mycobacterium tuberculosis MD19339	1447451	PRJNA234564	234564	Terrabacteria group	Actinobacteria	4.39488	65.5	-	JLGC01	123	4368	4134	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584602	GCA_000650035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/035/GCA_000650035.1_Myco_tube_MD19339_V1	-	MD19339
Clostridium saccharoperbutylacetonicum	36745	PRJNA322814	322814	Terrabacteria group	Firmicutes	6.21939	29.5018	chromosome:NZ_CP016087.1/CP016087.1; plasmid unnamed:NZ_CP016088.1/CP016088.1	-	2	5532	5310	2/17/17	4/17/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05170535	GCA_002003305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/003/305/GCA_002003305.1_ASM200330v1	-	N1-504
Streptococcus pneumoniae WL400	1367213	PRJNA212624	212624	Terrabacteria group	Firmicutes	2.14953	39.5	-	AVFA01	87	2381	2127	9/17/13	3/9/17	Contig	Allegheny Research Institute	SAMN02393751	GCA_000468315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/315/GCA_000468315.1_CGSSpWL400	-	WL400
Helicobacter pylori NQ4216	992023	PRJNA64073	64073	Proteobacteria	delta/epsilon subdivisions	1.65008	38.9	-	AKNR01	12	1647	1475	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00777290	GCA_000274945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/945/GCA_000274945.2_ASM27494v2	23661595	NQ4216
Neisseria meningitidis 2003051	1145181	PRJNA83575	83575	Proteobacteria	Betaproteobacteria	2.20663	51.7	-	APUP01	145	2532	2129	5/1/13	3/21/17	Contig	IGS	SAMN01780131	GCA_000387145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/145/GCA_000387145.2_ASM38714v2	-	2003051
Streptococcus pyogenes SP7-LAU	1390082	PRJNA215884	215884	Terrabacteria group	Firmicutes	1.9536	38.4	-	AWPE01	158	2002	1859	4/28/14	3/24/17	Contig	Lebanese American University	SAMN02741842	GCA_000648875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/875/GCA_000648875.1_Draft_SP7-LAU_Genome	24831139	SP7-LAU
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2763	996824	PRJNA63745	63745	Spirochaetes	Spirochaetia	4.5537	35	-	AFKC01	242	4064	3739	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254329	GCA_000217215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/215/GCA_000217215.2_CLC_glsol107	-	Fiocruz LV2763
Pseudomonas aeruginosa 3575	1447530	PRJNA234686	234686	Proteobacteria	Gammaproteobacteria	6.80362	66.1	-	JIEL01	76	6501	6300	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02584688	GCA_000629285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/285/GCA_000629285.1_Pseu_aeru_3575_V1	-	3575
Acinetobacter baumannii AB_TG27327	1221284	PRJNA172696	172696	Proteobacteria	Gammaproteobacteria	4.01296	39	-	AMIO01	104	3866	3733	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471232	GCA_000302195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/195/GCA_000302195.1_ASM30219v1	-	AB_TG27327
Streptococcus agalactiae BSU133	1105233	PRJNA86313	86313	Terrabacteria group	Firmicutes	2.03392	35.3	-	ANEE01	25	2106	2003	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991136	GCA_000311405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/405/GCA_000311405.1_ASM31140v1	-	BSU133
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.08208	41.1	-	CEDL01	84	2069	1968	2/14/15	3/17/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233896	GCA_000945535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/535/GCA_000945535.1_Velvet_assembly	-	LS1N
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.38859	38.2	-	FJHM01	22	3102	2998	2/20/16	3/27/17	Contig	SC	SAMEA2077535	GCA_900056185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/185/GCA_900056185.1_10625_2_43	-	2532STDY5467516
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.4411	50.7	-	CWSX01	363	4999	4151	7/17/15	2/24/17	Scaffold	SC	SAMEA3345106	GCA_001248295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/295/GCA_001248295.1_H14056026101	-	26101A_1
Burkholderia cenocepacia	95486	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	7.7732	66.9	-	JVKX01	1831	7885	6511	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197531	GCA_001056435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/435/GCA_001056435.1_ASM105643v1	26230489	34_BCEN
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.66607	67.6	-	LXGY01	443	7973	7283	5/4/16	3/28/17	Contig	Northern Arizona University	SAMN04208698	GCA_001637025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/025/GCA_001637025.1_Bp4115_assembly	-	NAU35B-7
Vibrio cholerae P-18785	1258564	PRJNA179340	179340	Proteobacteria	Gammaproteobacteria	3.9789	47.5	-	ANHS01	158	3710	3600	2/6/13	3/27/17	Contig	Central Research Institute for Epidemiology	SAMN02469778	GCA_000338215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/338/215/GCA_000338215.2_vcp18785v1	23969060	P-18785
Clostridioides difficile P41	1151417	PRJNA86009	86009	Terrabacteria group	Firmicutes	4.11986	28.4	-	AWZJ01	62	3916	3755	9/30/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766708	GCA_000473605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/605/GCA_000473605.2_ASM47360v2	-	P41
Vibrio parahaemolyticus S017	1394564	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.17568	45.1	-	AWMS01	345	4888	4668	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338878	GCA_000491835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/835/GCA_000491835.1_S017	-	S017
Klebsiella pneumoniae BIDMC 18B	1328413	PRJNA202024	202024	Proteobacteria	Gammaproteobacteria	5.74857	57	-	JMVX01	11	5843	5595	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02138643	GCA_000692915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/915/GCA_000692915.1_Kleb_pneu_BIDMC_18B_V1	-	BIDMC 18B
Enterococcus faecalis EnGen0283	1158670	PRJNA89069	89069	Terrabacteria group	Firmicutes	3.09784	37.4	-	AJER01	13	3171	3013	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809231	GCA_000395405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/405/GCA_000395405.1_Ente_faec_5952_V1	-	5952
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.09976	52.4	-	MBAI01	148	2448	2127	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04852963	GCA_001858605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/605/GCA_001858605.1_ASM185860v1	-	USO_DK09-033
Enterococcus faecium LCT-EF301	1302646	PRJNA192189	192189	Terrabacteria group	Firmicutes	2.69603	38.4	-	APJR01	14	2625	2476	6/13/13	3/24/17	Scaffold	BGI-Shenzhen	SAMN02469380	GCA_000411035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/035/GCA_000411035.1_Version_1_for_Enterococcus_faecium_Strain_LCT-EF301_genome	24604642	LCT-EF301
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.19101	41.2	-	CWCS01	167	2111	1912	6/23/15	3/26/17	Scaffold	SC	SAMEA1032833	GCA_001176345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/345/GCA_001176345.1_6903_5_84	-	EQUI0133
Polaribacter reichenbachii	996801	PRJNA362672	362672	FCB group	Bacteroidetes/Chlorobi group	4.12501	29.5	chromosome:NZ_CP019419.1/CP019419.1	-	1	3519	3441	1/30/17	4/17/17	Complete Genome	Kyung Hee University	SAMN06240835	GCA_001975665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/665/GCA_001975665.1_ASM197566v1	23053482	6Alg 8T
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.21309	59.8	-	FCKH01	14	5007	4848	1/21/16	3/27/17	Scaffold	SC	SAMEA2274028	GCA_001539325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/325/GCA_001539325.1_12082_3_53	-	2880STDY5682956
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.63801	31.4	-	FBQT01	14	1694	1605	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683501	GCA_001488035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/035/GCA_001488035.1_H054900335	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.2654	55.3	-	FJXQ01	68	5263	4990	4/5/16	3/28/17	Scaffold	SC	SAMEA2273479	GCA_900075115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/115/GCA_900075115.1_12045_5_58	-	e1082
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.11792	64.1	-	FVEZ01	14	5202	5023	3/10/17	3/18/17	Contig	SC	SAMEA2071439	GCA_900132395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/395/GCA_900132395.1_10665_4_70	-	325
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.1549	67.4	-	LPLC01	105	6434	6091	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449635	GCA_001534125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/125/GCA_001534125.1_ASM153412v1	-	MSMB728WGS
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.16473	54.9	-	LRJI01	93	5212	4974	1/22/16	3/27/17	Contig	JCVI	SAMN04431004	GCA_001526165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/165/GCA_001526165.1_ASM152616v1	-	SMART_1420
Pseudomonas sp. ATCC PTA-122608	1771311	PRJNA306149	306149	Proteobacteria	Gammaproteobacteria	6.98421	60.2	-	LPNO01	55	6517	6280	1/17/17	4/17/17	Contig	UC Davis	SAMN04346844	GCA_001952855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/855/GCA_001952855.1_ASM195285v1	-	ATCC PTA-122608
Streptomyces sp. WM6378	1415557	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.48671	70.7	-	LGDD01	362	8581	8043	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900619	GCA_001279695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/695/GCA_001279695.1_ASM127969v1	-	WM6378
Bacillus sp. JGI 0001002-E22	1094928	PRJNA176071	176071	Terrabacteria group	Firmicutes	0.560042	37.6	-	AUOK02	70	-	-	7/16/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02441471	GCA_000464175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/175/GCA_000464175.2_ASM46417v2	-	JGI 0001002-E22
Bacillus sp. EGD-AK10	1386080	PRJNA215170	215170	Terrabacteria group	Firmicutes	6.55975	55	-	AVPM01	1183	6758	6645	9/11/13	1/8/14	Contig	National Environmental Engineering Research Institute	SAMN02470624	GCA_000465855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/855/GCA_000465855.2_Bacillus_sp._EGD-AK10	-	EGD-AK10
Streptomyces sp. WM4235	1415551	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.81208	71.5	-	LGDE01	479	7092	6571	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900620	GCA_001279725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/725/GCA_001279725.1_ASM127972v1	-	WM4235
Pseudomonas sp. KK4	1855729	PRJNA214105	214105	Proteobacteria	Gammaproteobacteria	6.3841	60.8	-	LYVP01	292	5888	5680	2/3/17	4/17/17	Contig	Georgia Institute of Technology	SAMN05162225	GCA_001984065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/065/GCA_001984065.1_ASM198406v1	-	KK4
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.05387	54.8	-	LRJC01	80	4986	4745	1/22/16	3/27/17	Contig	JCVI	SAMN04431010	GCA_001526185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/526/185/GCA_001526185.1_ASM152618v1	-	SMART_1269
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.27961	67.4	-	LPLF01	99	6586	6226	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449639	GCA_001534135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/135/GCA_001534135.1_ASM153413v1	-	MSMB742WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18074	64.2	-	FVFD01	31	5194	5038	3/10/17	3/18/17	Contig	SC	SAMEA2071440	GCA_900132415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/415/GCA_900132415.1_10665_4_73	-	328
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.60905	55.6	-	FJWE01	13	4457	4283	4/5/16	3/28/17	Scaffold	SC	SAMEA2273295	GCA_900075125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/125/GCA_900075125.1_11983_7_71	-	e1150
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.63834	31.4	-	FBLV01	18	1691	1600	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683377	GCA_001488055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/055/GCA_001488055.1_p495D	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.14794	60	-	FCIH01	32	4860	4706	1/21/16	3/27/17	Scaffold	SC	SAMEA2273957	GCA_001539345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/345/GCA_001539345.1_12082_2_88	-	2880STDY5682884
Candidatus Blochmannia chromaiodes str. 640	1240471	PRJNA176942	176942	Proteobacteria	Gammaproteobacteria	0.791219	29.5	chromosome:NC_020075.1/CP003903.1	-	1	663	612	1/4/13	4/17/17	Complete Genome	Duke University	SAMN02603213	GCA_000331065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/065/GCA_000331065.1_ASM33106v1	23475937	640
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.15762	41.2	-	CVZL01	102	2109	1922	6/23/15	3/26/17	Scaffold	SC	SAMEA1032871	GCA_001176925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/176/925/GCA_001176925.1_6830_4_86	-	EQUI0231
Enterococcus faecium SD3B-2	1244155	PRJNA177765	177765	Terrabacteria group	Firmicutes	2.7343	37.9	-	ATIS01	68	2778	2600	6/25/13	3/27/17	Scaffold	The Genome Institute	SAMN02436907	GCA_000415265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/265/GCA_000415265.2_ASM41526v2	-	SD3B-2
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.1333	52.4	-	MBAH01	165	2468	2161	11/1/16	4/10/17	Contig	Orebro University Hospital	SAMN04852962	GCA_001858615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/615/GCA_001858615.1_ASM185861v1	-	USO_DK09-023
Enterococcus faecalis EnGen0194	1157378	PRJNA88389	88389	Terrabacteria group	Firmicutes	3.33091	37.1	-	AIPS01	24	3517	3348	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808871	GCA_000395985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/395/985/GCA_000395985.1_Ente_faec_B1005_V1	-	B1005
Klebsiella pneumoniae BIDMC 54	1438697	PRJNA234142	234142	Proteobacteria	Gammaproteobacteria	5.53331	57.3	-	JMVY01	19	5645	5379	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581275	GCA_000692935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/935/GCA_000692935.1_Kleb_pneu_BIDMC_54_V1	-	BIDMC 54
Vibrio parahaemolyticus S016	1394563	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.10543	45.2	-	AWMT01	595	4894	4588	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338877	GCA_000491855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/855/GCA_000491855.1_S016	-	S016
Clostridioides difficile P37	1151419	PRJNA86013	86013	Terrabacteria group	Firmicutes	4.08061	28.5	-	AWZK01	62	3825	3624	9/30/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766706	GCA_000473625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/625/GCA_000473625.2_ASM47362v2	-	P37
Vibrio cholerae CP1110	1233524	PRJNA175521	175521	Proteobacteria	Gammaproteobacteria	3.92542	47.4	-	AMWF01	184	3646	3510	5/2/13	3/23/17	Contig	CosmosID	SAMN02469662	GCA_000387585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/585/GCA_000387585.1_BJG-01	-	CP1110
Burkholderia pseudomallei	28450	PRJNA312311	312311	Proteobacteria	Betaproteobacteria	7.32218	68.1	-	LWRR01	39	7673	7122	5/12/16	3/28/17	Contig	Los Alamos National Laboratory	SAMN04497375	GCA_001642555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/555/GCA_001642555.1_ASM164255v1	-	PHLS6
Burkholderia cenocepacia	95486	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	8.09055	66.8	-	JVIA01	158	7636	7249	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197606	GCA_001056655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/655/GCA_001056655.1_ASM105665v1	26230489	415_BMUL
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.52886	50.6	-	CXBT01	402	4824	4299	7/16/15	2/24/17	Scaffold	SC	SAMEA954623	GCA_001248315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/315/GCA_001248315.1_5236_3_11	-	ShIB3507_440835
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54083	38.3	-	FJJP01	62	3238	3090	2/20/16	3/27/17	Contig	SC	SAMEA2077748	GCA_900056195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/195/GCA_900056195.1_10625_2_78	-	2532STDY5467551
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.15876	41	-	CEHT01	178	2170	2032	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233972	GCA_000945555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/555/GCA_000945555.1_Velvet_assembly	-	S10B
Streptococcus agalactiae MRI Z1-023	1154865	PRJNA86389	86389	Terrabacteria group	Firmicutes	2.09792	35.5	-	ANEN01	23	2189	2072	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993342	GCA_000311425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/425/GCA_000311425.1_ASM31142v1	-	MRI Z1-023
Acinetobacter baumannii AB_TG27335	1221286	PRJNA172698	172698	Proteobacteria	Gammaproteobacteria	4.0614	39	-	AMIQ01	137	3930	3781	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471234	GCA_000302215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/215/GCA_000302215.1_ASM30221v1	-	AB_TG27335
Pseudomonas aeruginosa 3574	1447529	PRJNA234685	234685	Proteobacteria	Gammaproteobacteria	6.43988	66.4	-	JIEM01	103	6189	5985	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02584687	GCA_000629305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/305/GCA_000629305.1_Pseu_aeru_3574_V1	-	3574
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2759	996823	PRJNA63743	63743	Spirochaetes	Spirochaetia	4.55422	35	-	AFKB01	261	4048	3734	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254328	GCA_000217235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/235/GCA_000217235.2_CLC_glsol106	-	Fiocruz LV2759
Streptococcus pyogenes SP10-LAU	1390084	PRJNA215886	215886	Terrabacteria group	Firmicutes	1.7712	38.4	-	AWPG01	12	1771	1652	4/28/14	4/10/17	Contig	Lebanese American University	SAMN02741846	GCA_000648895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/895/GCA_000648895.1_Draft_SP10-LAU_Genome	24831139	SP10-LAU
Neisseria meningitidis NM82	1145151	PRJNA83515	83515	Proteobacteria	Betaproteobacteria	2.24299	51.9	-	APTL01	132	2610	2228	5/1/13	3/21/17	Contig	IGS	SAMN01780101	GCA_000387185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/185/GCA_000387185.2_ASM38718v2	-	NM82
Helicobacter pylori Hp M1	992117	PRJNA64261	64261	Proteobacteria	delta/epsilon subdivisions	1.6553	39.1	-	AKQN01	8	1635	1477	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN01818776	GCA_000274965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/965/GCA_000274965.2_ASM27496v2	-	Hp M1
Streptococcus pneumoniae ICE59	1367479	PRJNA212765	212765	Terrabacteria group	Firmicutes	2.21262	39.5	-	AUYE01	85	2451	2197	9/17/13	3/9/17	Contig	Center for Genomic Sciences	SAMN02393755	GCA_000468335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/335/GCA_000468335.1_CGSSpICE59	-	ICE59
Clostridium saccharoperbutylacetonicum N1-4(HMT)	931276	PRJNA60605	60605	Terrabacteria group	Firmicutes	6.66645	29.498	chromosome:NC_020291.1/CP004121.1; plasmid Csp_135p:NC_020292.1/CP004122.1	-	2	5852	5686	2/19/13	5/18/17	Complete Genome	Georg-August-University Goettingen	SAMN02603265	GCA_000340885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/885/GCA_000340885.1_ASM34088v1	25323722	N1-4(HMT)
Mycobacterium tuberculosis MD19591	1447452	PRJNA234565	234565	Terrabacteria group	Actinobacteria	4.38716	65.6	-	JLGB01	83	4328	4112	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584603	GCA_000650055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/055/GCA_000650055.1_Myco_tube_MD19591_V1	-	MD19591
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.35863	35.1	-	MIFG01	95	5701	5407	12/21/16	3/28/17	Contig	"OARSA, CFSAN"	SAMN05415288	GCA_001913635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/635/GCA_001913635.1_ASM191363v1	-	MOD1_Bc85
Staphylococcus epidermidis	1282	PRJNA305483	305483	Terrabacteria group	Firmicutes	2.4434	32.5	-	LOHL01	138	2385	2249	1/9/17	3/28/17	Contig	CORPOICA	SAMN04325954	GCA_001940625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/625/GCA_001940625.1_StaphyBGSABV1	-	Col-B036
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.04573	37.9	-	JOWQ01	24	3095	2996	7/15/14	2/26/17	Contig	Cornell University	SAMN02741471	GCA_000726275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/275/GCA_000726275.1_ASM72627v1	-	FSL R8-5119
Yersinia pestis D1982001	755887	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.41088	47.4	-	ADRW01	896	4272	3982	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403071	GCA_000324725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/725/GCA_000324725.1_ASM32472v1	23271803	D1982001
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70537	30.4	-	CUUJ01	20	1816	1723	3/31/15	3/18/17	Contig	SC	SAMEA1401076	GCA_001224325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/325/GCA_001224325.1_7213_3_53	-	OXC6596
Clostridium bornimense	1216932	PRJEB4995	238033	Terrabacteria group	Firmicutes	3.61702	29.4714	chromosome I:NZ_HG917868.1/HG917868.1; chromosome II:NZ_HG917869.1/HG917869.1	-	2	3338	3206	2/11/14	4/17/17	Complete Genome	CEBITEC	SAMEA3138942	GCA_000577895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/895/GCA_000577895.1_M2_40	-	type strain: M2/40
Staphylococcus aureus M0288	1224927	PRJNA173475	173475	Terrabacteria group	Firmicutes	2.93381	33.1	-	ANZR01	8	3064	2898	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN01125840	GCA_000360685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/685/GCA_000360685.1_Stap_aure_M0288_V1	-	M0288
Staphylococcus aureus M0306	1158521	PRJNA88951	88951	Terrabacteria group	Firmicutes	2.89913	32.9	-	AJCN01	2	3033	2869	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809173	GCA_000360705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/705/GCA_000360705.1_Stap_aure_M0306_V1	-	M0306
Borrelia turicatae 91E135	314724	PRJNA13597	13597	Spirochaetes	Spirochaetia	1.16536	29.4619	chromosome:NC_008710.1/CP000049.1; plasmid cp31:NZ_CP019362.1/CP019362.1; plasmid cpD:NZ_CP019363.1/CP019363.1; plasmid lpB34:NZ_CP019364.1/CP019364.1; plasmid lpE43:NZ_CP019365.1/CP019365.1; plasmid lpF33.5:NZ_CP019366.1/CP019366.1; plasmid lpG29:NZ_CP019367.1/CP019367.1; plasmid lpT39:NZ_CP019368.1/CP019368.1; plasmid lpU43:NZ_CP019369.1/CP019369.1	-	9	1127	1051	12/22/06	7/7/17	Complete Genome	"Laboratory of Human Bacterial Pathenogenesis, Rocky Mountain Laboratories, NIAID"	SAMN02603508	GCA_000012085.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/085/GCA_000012085.2_ASM1208v2	-	9.10E+136
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.678	30.5	-	CUIL01	16	1776	1676	3/31/15	3/18/17	Contig	SC	SAMEA1010372	GCA_001224345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/345/GCA_001224345.1_7038_3_3	-	OXC6252
Yersinia pestis D1991004	755892	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.50608	47.5	-	ADRX01	1270	4433	3959	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403072	GCA_000324745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/745/GCA_000324745.1_ASM32474v1	23271803	D1991004
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.05964	37.8	-	JOWS01	40	3134	3027	7/15/14	2/26/17	Contig	Cornell University	SAMN02741473	GCA_000726305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/305/GCA_000726305.1_ASM72630v1	-	FSL R8-5230
Staphylococcus epidermidis	1282	PRJNA341407	341407	Terrabacteria group	Firmicutes	2.52707	31.9	-	MTFZ01	154	2525	2381	2/13/17	3/29/17	Contig	California Department of Public Health	SAMN05721775	GCA_001999745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/745/GCA_001999745.1_ASM199974v1	-	ATCC 12228
Bacillus cereus	1396	PRJNA357945	357945	Terrabacteria group	Firmicutes	5.85538	35	-	MSBQ01	100	6311	5822	1/4/17	3/28/17	Contig	Shihezi University	SAMN06162265	GCA_001932005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/005/GCA_001932005.1_ASM193200v1	-	PJC48
Mycobacterium tuberculosis MD18472	1447453	PRJNA234566	234566	Terrabacteria group	Actinobacteria	4.4147	65.6	-	JLGA01	96	4356	4136	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584604	GCA_000650075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/075/GCA_000650075.1_Myco_tube_MD18472_V1	-	MD18472
Campylobacter lari NCTC 11845	1388749	PRJNA215647	215647	Proteobacteria	delta/epsilon subdivisions	1.79151	29.4	chromosome:NZ_CP007775.1/CP007775.1	-	1	1796	1690	1/7/15	4/2/17	Complete Genome	"USDA, ARS"	SAMN03248544	GCA_000816365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/365/GCA_000816365.1_ASM81636v1	25381664	NCTC 11845
Streptococcus pneumoniae ICE44	1367478	PRJNA212764	212764	Terrabacteria group	Firmicutes	2.21308	39.5	-	AUYF01	83	2440	2186	9/17/13	3/9/17	Contig	Allegheny Research Institute	SAMN02393754	GCA_000468355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/355/GCA_000468355.1_CGSSpICE44	-	ICE44
Helicobacter pylori Hp M2	992118	PRJNA64263	64263	Proteobacteria	delta/epsilon subdivisions	1.65971	39.1	-	AKQO01	10	1636	1478	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778913	GCA_000274985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/985/GCA_000274985.2_ASM27498v2	-	Hp M2
Neisseria meningitidis NM94	1145152	PRJNA83517	83517	Proteobacteria	Betaproteobacteria	2.18272	51.9	-	APTM01	135	2540	2160	5/1/13	3/21/17	Contig	IGS	SAMN01780102	GCA_000387205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/205/GCA_000387205.2_ASM38720v2	-	NM94
Streptococcus pyogenes AA216	562016	PRJNA31299	31299	Terrabacteria group	Firmicutes	1.83975	38.6	-	JRLJ01	35	1848	1652	9/25/14	8/8/17	Contig	University of Maryland IGS	SAMN00000666	GCA_000758075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/075/GCA_000758075.1_ASM75807v1	-	AA216
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2752	996822	PRJNA63741	63741	Spirochaetes	Spirochaetia	4.54823	35	-	AFKA01	316	4056	3729	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254326	GCA_000217255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/255/GCA_000217255.2_CLC_glsol104	-	Fiocruz LV2752
Pseudomonas aeruginosa 3573	1447528	PRJNA234684	234684	Proteobacteria	Gammaproteobacteria	6.26993	66.5	-	JIEN01	74	5942	5770	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02584686	GCA_000629325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/325/GCA_000629325.1_Pseu_aeru_3573_V1	-	3573
Acinetobacter baumannii AB_TG27339	1221287	PRJNA172699	172699	Proteobacteria	Gammaproteobacteria	3.97151	38.9	-	AMIR01	46	3809	3667	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471260	GCA_000302235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/235/GCA_000302235.1_ASM30223v1	-	AB_TG27339
Streptococcus agalactiae str. Gottschalk 31825	1105240	PRJNA86447	86447	Terrabacteria group	Firmicutes	2.04373	35.3	-	ANFB01	27	2104	1991	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991143	GCA_000311445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/445/GCA_000311445.1_ASM31144v1	-	Gottschalk 31825
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03681	41.2	-	CEIN01	65	2020	1920	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234023	GCA_000945595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/595/GCA_000945595.1_Velvet_assembly	-	S16B
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54135	38.3	-	FJKT01	61	3235	3092	2/20/16	3/27/17	Contig	SC	SAMEA2080788	GCA_900056215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/215/GCA_900056215.1_10625_3_47	-	2532STDY5467616
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.76469	50.7	-	CXLA01	388	5370	4585	7/17/15	2/24/17	Scaffold	SC	SAMEA2164633	GCA_001248345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/345/GCA_001248345.1_8290_4_87	-	124327
Burkholderia cenocepacia	95486	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	8.02733	66.8	-	JVHQ01	236	7615	7118	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197616	GCA_001056705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/705/GCA_001056705.1_ASM105670v1	26230489	423_BMUL
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.02825	68.2	-	LWUQ01	264	7412	6828	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208554	GCA_001976165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/165/GCA_001976165.1_ASM197616v1	-	2002721738
Vibrio cholerae CP1115	1235473	PRJNA175908	175908	Proteobacteria	Gammaproteobacteria	3.92707	47.4	-	AMWR01	183	3643	3506	5/2/13	3/23/17	Contig	CosmosID	SAMN02469660	GCA_000387605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/605/GCA_000387605.1_BJG-01	-	CP1115
Clostridioides difficile P53	1151427	PRJNA86031	86031	Terrabacteria group	Firmicutes	4.02504	28.3	-	AWZO01	41	3697	3555	9/30/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766717	GCA_000473645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/645/GCA_000473645.2_ASM47364v2	-	P53
Vibrio parahaemolyticus S015	1394562	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.14785	45.2	-	AWMU01	545	4916	4657	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338876	GCA_000491875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/875/GCA_000491875.1_S015	-	S015
Klebsiella pneumoniae BIDMC 55	1438698	PRJNA234143	234143	Proteobacteria	Gammaproteobacteria	5.37105	57.3	-	JMVZ01	7	5325	5088	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581276	GCA_000692955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/955/GCA_000692955.1_Kleb_pneu_BIDMC_55_V1	-	BIDMC 55
Enterococcus faecalis EnGen0195	1157379	PRJNA88391	88391	Terrabacteria group	Firmicutes	3.25511	37.1	-	AIPT01	28	3423	3265	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808872	GCA_000396005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/005/GCA_000396005.1_Ente_faec_B1138_V1	-	B1138
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.1146	52.5	-	MBAL01	153	2466	2151	11/1/16	4/10/17	Contig	Orebro University Hospital	SAMN04852966	GCA_001858665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/665/GCA_001858665.1_ASM185866v1	-	USO_SP09-062
Enterococcus faecium SD2A-2	1244154	PRJNA177764	177764	Terrabacteria group	Firmicutes	2.67821	38.2	-	ATIT01	106	2689	2525	6/25/13	3/27/17	Scaffold	The Genome Institute	SAMN02436838	GCA_000415285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/285/GCA_000415285.2_ASM41528v2	-	SD2A-2
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.13422	41.2	-	CWFG01	75	2068	1875	6/23/15	3/26/17	Scaffold	SC	SAMEA1032909	GCA_001177525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/525/GCA_001177525.1_4516_1	-	EQUI0002
Spiroplasma mirum ATCC 29335	838561	PRJNA217816	217816	Terrabacteria group	Tenericutes	1.13261	29.4	chromosome:NZ_CP006720.1/CP006720.1	-	1	1208	1086	2/7/14	4/9/17	Complete Genome	Louisiana State Universtiy	SAMN03081484	GCA_000565195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/195/GCA_000565195.1_ASM56519v1	-	SMCA
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.29686	59.7	-	FCHF01	29	5133	4958	1/21/16	3/27/17	Scaffold	SC	SAMEA2273923	GCA_001539365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/365/GCA_001539365.1_12082_2_58	-	2880STDY5682850
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.72646	31.3	-	FBOS01	79	1767	1653	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683414	GCA_001488075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/075/GCA_001488075.1_H091940890	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.1536	54.9	-	FJWI01	71	5103	4841	4/5/16	3/28/17	Scaffold	SC	SAMEA2273308	GCA_900075135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/135/GCA_900075135.1_11983_7_84	-	e1214
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.20051	64	-	FSBQ01	17	5251	5125	12/14/16	3/21/17	Contig	SC	SAMEA2068813	GCA_900132425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/425/GCA_900132425.1_10665_4_78	-	333
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.11793	67.5	-	LPLK01	100	6422	6095	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449644	GCA_001534195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/195/GCA_001534195.1_ASM153419v1	-	MSMB752WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.72802	55.6	-	LVUA01	144	4681	4375	4/25/16	3/28/17	Contig	JCVI	SAMN04572599	GCA_001631045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/045/GCA_001631045.1_ASM163104v1	-	GN05334
Pseudomonas sp. A25(2017)	1945865	PRJNA369723	369723	Proteobacteria	Gammaproteobacteria	6.3968	60.9	-	MUOA01	139	5848	5625	2/16/17	4/17/17	Contig	Norwegian University of Life Sciences (NMBU)	SAMN06292984	GCA_002001065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/065/GCA_002001065.1_ASM200106v1	-	A25
Streptomyces sp. MMG1522	1415545	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.95376	72.6	-	LGDF01	190	6975	6631	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900621	GCA_001279735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/735/GCA_001279735.1_ASM127973v1	-	MMG1522
Bacillus sp. JGI 001006-L10	1167733	PRJNA175199	175199	Terrabacteria group	Firmicutes	1.21169	37.7	-	AYGU01	78	-	-	10/28/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440737	GCA_000493835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/835/GCA_000493835.1_ASM49383v1	-	JGI 001006-L10
Bacillus sp. BSC154	1549811	PRJNA257891	257891	Terrabacteria group	Firmicutes	4.02815	43.7	-	JPWY01	19	4021	3869	8/15/14	12/2/14	Contig	Arizona State University	SAMN02979379	GCA_000740655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/655/GCA_000740655.1_ASM74065v1	25395651	BSC154
Streptomyces sp. XY413	1519479	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.56528	72.3	-	LGDP01	255	7780	7334	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900626	GCA_001279765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/765/GCA_001279765.1_ASM127976v1	-	XY413
Pseudomonas sp. FSL W5-0299	1917484	PRJNA350783	350783	Proteobacteria	Gammaproteobacteria	7.13972	59.2	-	MPIP01	137	6682	6405	2/21/17	2/23/17	Contig	Cornell University	SAMN05948574	GCA_002005125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/125/GCA_002005125.1_ASM200512v1	-	FSL W5-0299
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.59396	55.8	-	LVTX01	84	4456	4228	4/25/16	3/28/17	Contig	JCVI	SAMN04572596	GCA_001631055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/055/GCA_001631055.1_ASM163105v1	-	GN04967
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.43036	67.4	-	LPMA01	65	6725	6440	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449660	GCA_001534265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/265/GCA_001534265.1_ASM153426v1	-	MSMB794WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.27009	64.1	-	FVFH01	29	5308	5145	3/10/17	3/18/17	Contig	SC	SAMEA2068812	GCA_900132435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/435/GCA_900132435.1_10665_4_75	-	330
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.72516	54.8	-	FJWD01	17	4583	4396	4/5/16	3/28/17	Scaffold	SC	SAMEA2273485	GCA_900075145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/145/GCA_900075145.1_12045_5_62	-	e1026
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.82407	31	-	FAXS01	64	1917	1791	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683006	GCA_001488095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/095/GCA_001488095.1_H060260417	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.15519	59.9	-	FCIZ01	16	4899	4739	1/21/16	3/27/17	Scaffold	SC	SAMEA2273985	GCA_001539385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/385/GCA_001539385.1_12082_3_19	-	2880STDY5682913
Spiroplasma mirum ATCC 29335	838561	PRJNA49731	49731	Terrabacteria group	Tenericutes	1.13259	29.4	chromosome:NZ_CP002082.1/CP002082.1	-	1	1203	1099	1/9/14	4/9/17	Complete Genome	Nanjing Normal University	SAMN02641528	GCA_000517365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/365/GCA_000517365.1_ASM51736v1	-	ATCC 29335
Streptococcus equi	1336	PRJEB18878	360785	Terrabacteria group	Firmicutes	2.13763	41.2	-	FTNH01	93	2140	1868	1/14/17	3/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421817	GCA_900156215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/215/GCA_900156215.1_IMG-taxon_2681812816_annotated_assembly	-	ATCC 33398
Enterococcus faecium SD1C-2	1244153	PRJNA177763	177763	Terrabacteria group	Firmicutes	2.64004	37.9	-	ATIU01	86	2677	2534	6/25/13	3/24/17	Scaffold	The Genome Institute	SAMN02436768	GCA_000415305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/305/GCA_000415305.1_ASM41530v1	-	SD1C-2
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.11099	52.4	-	MBAK01	170	2471	2149	11/1/16	4/10/17	Contig	Orebro University Hospital	SAMN04852965	GCA_001858675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/675/GCA_001858675.1_ASM185867v1	-	USO_SP09-048
Enterococcus faecalis EnGen0196	1157380	PRJNA88393	88393	Terrabacteria group	Firmicutes	3.28873	37.1	-	AIPU01	39	3468	3303	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808873	GCA_000396025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/025/GCA_000396025.1_Ente_faec_B1249_V1	-	B1249
Klebsiella pneumoniae BIDMC 60	1438699	PRJNA234148	234148	Proteobacteria	Gammaproteobacteria	5.77847	57.1	-	JMWA01	8	5910	5650	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581281	GCA_000692975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/975/GCA_000692975.1_Kleb_pneu_BIDMC_60_V1	-	BIDMC 60
Vibrio parahaemolyticus S014	1394561	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.15925	45.2	-	AWMV01	545	4934	4651	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338875	GCA_000491895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/895/GCA_000491895.1_S014	-	S014
Clostridioides difficile P64	1151431	PRJNA86039	86039	Terrabacteria group	Firmicutes	4.22672	28.6	-	AWZL01	72	3983	3716	9/30/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766721	GCA_000473665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/665/GCA_000473665.2_ASM47366v2	-	P64
Vibrio cholerae CP1111	1235443	PRJNA175897	175897	Proteobacteria	Gammaproteobacteria	3.92749	47.4	-	AMWS01	199	3648	3504	5/2/13	3/23/17	Contig	CosmosID	SAMN02469658	GCA_000387625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/625/GCA_000387625.1_BJG-01	-	CP1111
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.98767	68.2	-	LWUV01	414	7343	6736	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208559	GCA_001976175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/175/GCA_001976175.1_ASM197617v1	-	2002721712
Burkholderia cenocepacia	95486	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	8.12405	66.7	-	JVCQ01	178	7677	7277	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197746	GCA_001057175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/175/GCA_001057175.1_ASM105717v1	26230489	548_BMUL
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.67516	50.7	-	CXGF01	398	5085	4513	7/16/15	2/24/17	Scaffold	SC	SAMEA1013751	GCA_001248385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/385/GCA_001248385.1_6551_1_3	-	SS117886_2798525
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.4861	38.3	-	FJLS01	33	3187	3060	2/20/16	3/27/17	Contig	SC	SAMEA2078027	GCA_900056225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/225/GCA_900056225.1_10625_3_64	-	2532STDY5467633
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03067	41.3	-	CEJN01	67	2025	1928	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233964	GCA_000945675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/675/GCA_000945675.1_Velvet_assembly	-	LSD
Streptococcus agalactiae FSL S3-023	1154794	PRJNA86179	86179	Terrabacteria group	Firmicutes	2.04146	35.3	-	ANCP01	20	2109	1998	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991082	GCA_000311465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/465/GCA_000311465.1_ASM31146v1	-	FSL S3-023
Acinetobacter baumannii AB_TG27343	1221288	PRJNA172700	172700	Proteobacteria	Gammaproteobacteria	4.01117	39.1	-	AMIS01	182	3973	3782	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471285	GCA_000302255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/255/GCA_000302255.1_ASM30225v1	-	AB_TG27343
Pseudomonas aeruginosa PAO1-GFP	1418248	PRJNA227545	227545	Proteobacteria	Gammaproteobacteria	6.28071	66.5	-	JIEO01	6	5917	5781	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02402446	GCA_000629345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/345/GCA_000629345.1_Pseu_aeru_PAO1-GFP_V1	-	PAO1-GFP
Leptospira interrogans serovar Copenhageni str. Fiocruz LV999	996821	PRJNA63739	63739	Spirochaetes	Spirochaetia	4.54317	35	-	AFJZ01	818	4225	3698	6/7/11	5/18/17	Scaffold	J. Craig Venter Institute	SAMN00254325	GCA_000217275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/275/GCA_000217275.2_CLC_glsol100	-	Fiocruz LV999
Streptococcus pyogenes SS1447	562017	PRJNA31301	31301	Terrabacteria group	Firmicutes	1.91516	38.6	-	JRLL01	88	1935	1725	9/25/14	3/24/17	Contig	University of Maryland IGS	SAMN00000654	GCA_000758085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/085/GCA_000758085.1_ASM75808v1	-	SS1447
Neisseria meningitidis NM313	1145154	PRJNA83521	83521	Proteobacteria	Betaproteobacteria	2.17961	51.8	-	APTO01	136	2528	2133	5/1/13	3/21/17	Contig	IGS	SAMN01780104	GCA_000387225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/225/GCA_000387225.2_ASM38722v2	-	NM313
Helicobacter pylori Hp M6	992122	PRJNA64271	64271	Proteobacteria	delta/epsilon subdivisions	1.66411	39.1	-	AKQS01	10	1640	1478	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778921	GCA_000275005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/005/GCA_000275005.2_ASM27500v2	-	Hp M6
Streptococcus pneumoniae Spain9V	1367485	PRJNA212774	212774	Terrabacteria group	Firmicutes	2.08659	39.7	-	AUYG01	115	2330	2059	9/17/13	3/9/17	Contig	Center for Genomic Sciences	SAMN02393761	GCA_000468375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/375/GCA_000468375.1_CGSSpSPAIN9V	-	Spain9V
Borrelia anserina Es	1365188	PRJNA212123	212123	Spirochaetes	Spirochaetia	1.04269	29.3728	chromosome:NZ_CP013704.1/CP013704.1; plasmid cp5:NZ_CP014521.1/CP014521.1; plasmid fragment_4:NZ_CP018882.1/CP018882.1; plasmid lpA89:NZ_CP014325.1/CP014325.1; plasmid lpJ:NZ_CP014605.1/CP014605.1; plasmid pB25:NZ_CP014520.1/CP014520.1	-	6	975	922	12/30/16	4/17/17	Complete Genome	University of California Irvine	SAMN04359737	GCA_001936255.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/255/GCA_001936255.1_ASM193625v1	-	Es
Mycobacterium tuberculosis MD19323	1447454	PRJNA234567	234567	Terrabacteria group	Actinobacteria	4.38157	65.6	-	JLFZ01	90	4327	4108	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584605	GCA_000650095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/095/GCA_000650095.1_Myco_tube_MD19323_V1	-	MD19323
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	6.1455	35.1	-	MNKZ01	620	6591	6011	1/9/17	3/28/17	Contig	"OARSA, CFSAN"	SAMN05901941	GCA_001940365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/365/GCA_001940365.1_ASM194036v1	-	MOD1_Bc174
Staphylococcus epidermidis	1282	PRJNA302961	302961	Terrabacteria group	Firmicutes	2.85146	31.9	-	LYLT01	345	2832	2523	7/20/17	7/22/17	Contig	NHGRI	SAMN04286996	GCA_002221835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/835/GCA_002221835.1_ASM222183v1	-	ABKUX
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.12102	37.9	-	JOWT01	87	3182	3073	7/15/14	2/26/17	Contig	Cornell University	SAMN02741474	GCA_000726325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/325/GCA_000726325.1_ASM72632v1	-	FSL R8-5233
Yersinia pestis E1977001	755939	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.38558	48	-	ADRY01	1183	4190	3884	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403073	GCA_000324765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/765/GCA_000324765.1_ASM32476v1	23271803	E1977001
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.63923	30.4	-	CUUU01	14	1724	1593	3/31/15	3/18/17	Contig	SC	SAMEA1401208	GCA_001224385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/385/GCA_001224385.1_7213_3_65	-	OXC6609
Campylobacter sputorum	206	PRJNA284989	284989	Proteobacteria	delta/epsilon subdivisions	1.68131	29.3	chromosome:NZ_CP019685.1/CP019685.1	-	1	1700	1610	7/18/17	7/21/17	Complete Genome	"USDA, ARS, WRRC"	SAMN03737992	GCA_002220775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/775/GCA_002220775.1_ASM222077v1	28633450	RM8705
Staphylococcus aureus M0312	1224928	PRJNA173476	173476	Terrabacteria group	Firmicutes	2.9861	32.9	-	ANZS01	5	3158	2988	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN01125841	GCA_000360725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/725/GCA_000360725.1_Stap_aure_M0312_V1	-	M0312
Staphylococcus aureus M0326	1157020	PRJNA88597	88597	Terrabacteria group	Firmicutes	2.92954	33	-	AIWG01	11	3058	2882	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792145	GCA_000360745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/745/GCA_000360745.1_Stap_aure_M0326_V1	-	M0326
Mycoplasma bovis	28903	PRJNA371385	371385	Terrabacteria group	Tenericutes	1.01675	29.3	chromosome:NZ_CP019639.1/CP019639.1	-	1	867	770	3/2/17	3/6/17	Complete Genome	"Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences"	SAMN06298538	GCA_002009275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/275/GCA_002009275.1_ASM200927v1	-	08M
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.72066	30.3	-	CUJI01	24	1825	1719	3/31/15	3/18/17	Contig	SC	SAMEA1010643	GCA_001224465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/465/GCA_001224465.1_7038_3_50	-	OXC6300
Yersinia pestis biovar Antiqua str. E1979001	360099	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.51625	47.5	-	ADRZ01	941	4330	4044	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403021	GCA_000324785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/785/GCA_000324785.1_ASM32478v1	-	E1979001
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.12513	37.9	-	JOWB01	21	3177	3083	7/15/14	2/26/17	Contig	Cornell University	SAMN02741456	GCA_000726335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/335/GCA_000726335.1_ASM72633v1	-	FSL F6-0312
Staphylococcus epidermidis	1282	PRJNA303007	303007	Terrabacteria group	Firmicutes	2.5292	32.2	-	LYLX01	87	2491	2327	7/20/17	7/22/17	Contig	NHGRI	SAMN04287040	GCA_002221915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/915/GCA_002221915.1_ASM222191v1	-	ABKWR
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.30317	35	-	MLKE01	178	5593	5296	2/1/17	3/29/17	Contig	"OARSA, CFSAN"	SAMN05905663	GCA_001982855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/855/GCA_001982855.1_ASM198285v1	-	MOD1_Bc149
Mycobacterium tuberculosis MD19051	1447455	PRJNA234568	234568	Terrabacteria group	Actinobacteria	4.3964	65.6	-	JLFY01	74	4325	4110	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584606	GCA_000650115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/115/GCA_000650115.1_Myco_tube_MD19051_V1	-	MD19051
Mycoplasma bovis	28903	PRJNA237726	237726	Terrabacteria group	Tenericutes	0.977322	29.3	chromosome:NZ_CP007589.1/CP007589.1	-	1	834	738	4/6/16	4/5/17	Complete Genome	State Key Laboratory of Agricultural Microbiology	SAMN02639473	GCA_001611865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/865/GCA_001611865.1_ASM161186v1	-	HB0801-P115
Streptococcus pneumoniae 1417	1367484	PRJNA212773	212773	Terrabacteria group	Firmicutes	2.06228	39.6	-	AUYH01	82	2294	2035	9/17/13	3/9/17	Contig	Center for Genomic Sciences	SAMN02393760	GCA_000468395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/395/GCA_000468395.1_CGSSp1417	-	1417
Helicobacter pylori Hp M5	992121	PRJNA64269	64269	Proteobacteria	delta/epsilon subdivisions	1.66762	39.2	-	AKQR01	6	1638	1476	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778920	GCA_000275025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/025/GCA_000275025.2_ASM27502v2	-	Hp M5
Neisseria meningitidis NM95	1145153	PRJNA83519	83519	Proteobacteria	Betaproteobacteria	2.17631	51.9	-	APTN01	131	2541	2160	5/1/13	3/15/17	Contig	IGS	SAMN01780103	GCA_000387245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/245/GCA_000387245.2_ASM38724v2	-	NM95
Streptococcus pyogenes AA472	562018	PRJNA31311	31311	Terrabacteria group	Firmicutes	1.7336	38.4	-	JRLK01	32	1723	1636	9/25/14	3/24/17	Contig	University of Maryland IGS	SAMN00000677	GCA_000758125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/125/GCA_000758125.1_ASM75812v1	-	AA472
Leptospira interrogans serovar Copenhageni str. Fiocruz LV239	996816	PRJNA63729	63729	Spirochaetes	Spirochaetia	4.54899	35	-	AFJU01	311	4056	3731	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254382	GCA_000217315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/315/GCA_000217315.2_CLC_glsol084	-	Fiocruz LV239
Pseudomonas aeruginosa PS75	1418247	PRJNA227544	227544	Proteobacteria	Gammaproteobacteria	6.34006	66.5	-	JIEP01	7	6008	5866	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02402445	GCA_000629365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/365/GCA_000629365.1_Pseu_aeru_PS75_V1	-	PS75
Acinetobacter baumannii TG19582	1221292	PRJNA172703	172703	Proteobacteria	Gammaproteobacteria	3.79769	39.1	-	AMIV01	366	3808	3474	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471241	GCA_000302275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/275/GCA_000302275.1_ASM30227v1	-	TG19582
Streptococcus agalactiae FSL S3-137	1154801	PRJNA86193	86193	Terrabacteria group	Firmicutes	2.057	35.2	-	ANCU01	22	2135	2031	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991069	GCA_000311485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/485/GCA_000311485.1_ASM31148v1	-	FSL S3-137
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04237	41.2	-	CEDQ01	58	2022	1920	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233902	GCA_000945695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/695/GCA_000945695.1_Velvet_assembly	-	LS2G
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54206	38.3	-	FJMD01	34	3241	3107	2/20/16	3/27/17	Contig	SC	SAMEA2078029	GCA_900056235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/235/GCA_900056235.1_10625_3_70	-	2532STDY5467639
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.73031	50.7	-	CXFZ01	403	5226	4588	7/16/15	2/24/17	Scaffold	SC	SAMEA1013779	GCA_001248405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/405/GCA_001248405.1_6496_8_11	-	SS106312_2712860
Burkholderia cenocepacia	95486	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	7.92643	66.9	-	JVDJ01	699	7731	6832	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197727	GCA_001071255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/255/GCA_001071255.1_ASM107125v1	26230489	531_BMUL
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.10732	68.2	-	LWUR01	321	7440	6810	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208555	GCA_001976185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/185/GCA_001976185.1_ASM197618v1	-	2002721784
Vibrio cholerae CP1112	1235444	PRJNA175898	175898	Proteobacteria	Gammaproteobacteria	3.92771	47.4	-	AMWT01	193	3650	3511	5/2/13	3/23/17	Contig	CosmosID	SAMN02469664	GCA_000387645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/645/GCA_000387645.1_BJG-01	-	CP1112
Clostridioides difficile P68	1151432	PRJNA86041	86041	Terrabacteria group	Firmicutes	4.05619	28.4	-	AWZM01	49	3755	3568	9/30/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01766722	GCA_000473685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/685/GCA_000473685.2_ASM47368v2	-	P68
Vibrio parahaemolyticus S013	1394560	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.01897	45.4	-	AWMW01	462	4788	4557	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338874	GCA_000491915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/915/GCA_000491915.1_S013	-	S013
Klebsiella pneumoniae BIDMC 68	1438701	PRJNA234156	234156	Proteobacteria	Gammaproteobacteria	5.79212	57.1	-	JMWC01	17	5901	5646	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581289	GCA_000693015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/015/GCA_000693015.1_Kleb_pneu_BIDMC_68_V1	-	BIDMC 68
Enterococcus faecalis EnGen0197	1157381	PRJNA88395	88395	Terrabacteria group	Firmicutes	3.29134	37.1	-	AIQG01	19	3465	3304	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808874	GCA_000396045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/045/GCA_000396045.1_Ente_faec_B1851_V1	-	B1851
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.11571	52.4	-	MBAM01	162	2468	2152	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04852967	GCA_001858695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/695/GCA_001858695.1_ASM185869v1	-	USO_NL09-008
Enterococcus faecium SB2C-2	1244152	PRJNA177762	177762	Terrabacteria group	Firmicutes	2.92424	37.4	-	ATIV01	184	3039	2847	6/25/13	3/27/17	Scaffold	The Genome Institute	SAMN02436708	GCA_000415325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/325/GCA_000415325.2_ASM41532v2	-	SB2C-2
Mycoplasma bovis	28903	PRJNA237730	237730	Terrabacteria group	Tenericutes	0.977304	29.3	chromosome:NZ_CP007590.1/CP007590.1	-	1	835	714	4/6/16	4/5/17	Complete Genome	State Key Laboratory of Agricultural Microbiology	SAMN02639476	GCA_001611895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/895/GCA_001611895.1_ASM161189v1	-	HB0801-P150
Mycoplasma bovis	28903	PRJNA237729	237729	Terrabacteria group	Tenericutes	0.977257	29.3	chromosome:NZ_CP007591.1/CP007591.1	-	1	835	694	4/6/16	4/5/17	Complete Genome	State Key Laboratory of Agricultural Microbiology	SAMN02639475	GCA_001611935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/935/GCA_001611935.1_ASM161193v1	-	HB0801-P180
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.24358	60	-	FCJS01	26	4976	4811	1/21/16	3/27/17	Scaffold	SC	SAMEA2274009	GCA_001539405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/405/GCA_001539405.1_12082_3_38	-	2880STDY5682937
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66	31.4	-	FAYH01	22	1718	1627	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683020	GCA_001488135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/135/GCA_001488135.1_EC3501	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.28496	54.9	-	FJWX01	66	5222	4978	4/5/16	3/28/17	Scaffold	SC	SAMEA2273209	GCA_900075155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/155/GCA_900075155.1_12045_4_80	-	e1091
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.97124	64.2	-	FVFJ01	21	4910	4766	3/10/17	3/18/17	Contig	SC	SAMEA2070670	GCA_900132445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/445/GCA_900132445.1_10665_4_77	-	332
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.85532	67.2	-	LPMV01	126	7135	6727	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449681	GCA_001534345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/345/GCA_001534345.1_ASM153434v1	-	MSMB1466WGS
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.84457	55.4	-	LVUH01	103	4776	4509	4/25/16	3/28/17	Contig	JCVI	SAMN04572684	GCA_001631125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/125/GCA_001631125.1_ASM163112v1	-	GN05606
Pseudomonas sp. MF6394	1960829	PRJNA374964	374964	Proteobacteria	Gammaproteobacteria	6.92619	59.5	-	MVOJ01	88	6557	6247	3/6/17	3/9/17	Contig	Nofima	SAMN06340223	GCA_002018845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/845/GCA_002018845.1_ASM201884v1	-	MF6394
Streptomyces sp. MMG1533	1415546	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.3621	70.6	-	LGDG01	294	9439	8822	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900622	GCA_001279775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/775/GCA_001279775.1_ASM127977v1	-	MMG1533
Bacillus sp. JCM 19056	1460650	PRJDB1628	243824	Terrabacteria group	Firmicutes	2.99715	34.7	-	BAXM01	89	-	-	10/1/15	10/1/15	Contig	"Microbe Division/JCM, RIKEN BioResource Center"	SAMD00000387	GCA_001310515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/515/GCA_001310515.1_ASM131051v1	-	JCM 19056
Bacillus sp. JCM 19058	1460652	PRJDB1630	245976	Terrabacteria group	Firmicutes	5.36065	42.7	-	BAXO01	204	-	-	10/1/15	10/1/15	Contig	"Microbe Division/JCM, RIKEN BioResource Center"	SAMD00000389	GCA_001310555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/555/GCA_001310555.1_ASM131055v1	-	JCM 19058
Streptomyces sp. XY431	1415562	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.4907	73.4	-	LGDO01	528	8138	7635	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900627	GCA_001279805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/805/GCA_001279805.1_ASM127980v1	-	XY431
Pseudomonas sp. MF4836	1960827	PRJNA374967	374967	Proteobacteria	Gammaproteobacteria	7.54915	62	-	MVOL01	48	6916	6740	3/6/17	3/9/17	Contig	Nofima	SAMN06340226	GCA_002018875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/875/GCA_002018875.1_ASM201887v1	-	MF4836
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.13551	55	-	LVTY01	192	5115	4765	4/25/16	3/28/17	Contig	JCVI	SAMN04572597	GCA_001631145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/145/GCA_001631145.1_ASM163114v1	-	GN05035
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	6.26483	67.4	-	LPMX01	78	5782	5470	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449684	GCA_001534375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/375/GCA_001534375.1_ASM153437v1	-	MSMB1509WGS
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.9302	64.2	-	FVFI01	11	4919	4771	3/10/17	3/18/17	Contig	SC	SAMEA2070671	GCA_900132475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/475/GCA_900132475.1_10665_4_80	-	335
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.96927	54.9	-	FJWO01	44	4877	4660	4/5/16	3/28/17	Scaffold	SC	SAMEA2273313	GCA_900075165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/165/GCA_900075165.1_11983_7_89	-	e1236
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66089	31.4	-	FBAH01	23	1721	1630	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683061	GCA_001488155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/155/GCA_001488155.1_EC3693	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.1178	60	-	FCIC01	14	4877	4716	1/21/16	3/27/17	Scaffold	SC	SAMEA2273950	GCA_001539425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/425/GCA_001539425.1_12082_2_81	-	2880STDY5682877
Mycoplasma bovis	28903	PRJNA282697	282697	Terrabacteria group	Tenericutes	0.990348	29.3	chromosome:NZ_CP011348.1/CP011348.1	-	1	843	763	6/30/15	4/3/17	Complete Genome	Inner Mongolia Agricultural University	SAMN03575868	GCA_001043135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/135/GCA_001043135.1_ASM104313v1	-	NM 2012
Streptococcus equi subsp. zooepidemicus	40041	PRJNA268161	268161	Terrabacteria group	Firmicutes	2.00827	41.6	-	JTJH01	76	1917	1549	2/12/15	6/9/15	Contig	Animal Health Trust	SAMN03216556	GCA_000836615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/836/615/GCA_000836615.1_ASM83661v1	25701732	2329
Enterococcus faecium OC2A-1	1244151	PRJNA177761	177761	Terrabacteria group	Firmicutes	2.68251	37.9	-	ATIW01	78	2724	2571	6/25/13	3/24/17	Scaffold	The Genome Institute	SAMN02436769	GCA_000415345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/345/GCA_000415345.1_ASM41534v1	-	OC2A-1
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.11953	52.4	-	MBAN01	133	2476	2155	11/1/16	4/10/17	Contig	Orebro University Hospital	SAMN04852968	GCA_001858715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/715/GCA_001858715.1_ASM185871v1	-	USO_G09-060
Enterococcus faecalis EnGen0198	1157382	PRJNA88397	88397	Terrabacteria group	Firmicutes	2.93852	37.2	-	AIQI01	15	3005	2836	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808875	GCA_000396065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/065/GCA_000396065.1_Ente_faec_B1921_V1	-	B1921
Klebsiella pneumoniae BIDMC 69	1438702	PRJNA234157	234157	Proteobacteria	Gammaproteobacteria	5.54159	57.1	-	JMWD01	10	5537	5286	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581290	GCA_000693035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/035/GCA_000693035.1_Kleb_pneu_BIDMC_69_V1	-	BIDMC 69
Vibrio parahaemolyticus S012	1394559	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.07546	45.3	-	AWMX01	533	4896	4617	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338873	GCA_000491935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/935/GCA_000491935.1_S012	-	S012
Clostridioides difficile F665	1232197	PRJNA175462	175462	Terrabacteria group	Firmicutes	4.08232	28.7	-	AWZN01	49	3827	3632	9/30/13	3/18/17	Contig	Institute for Genome Sciences	SAMN01978910	GCA_000473705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/705/GCA_000473705.2_ASM47370v2	-	F665
Vibrio cholerae CP1113	1235454	PRJNA175899	175899	Proteobacteria	Gammaproteobacteria	3.92579	47.4	-	AMWU01	186	3636	3505	5/2/13	3/23/17	Contig	CosmosID	SAMN02469659	GCA_000387665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/665/GCA_000387665.1_BJG-01	-	CP1113
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.28662	68	-	LWUU01	234	7547	6927	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208558	GCA_001976195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/195/GCA_001976195.1_ASM197619v1	-	2002721183
Burkholderia cenocepacia	95486	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	7.8013	66.9	-	JVDN01	1616	7860	6387	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197723	GCA_001071265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/265/GCA_001071265.1_ASM107126v1	26230489	528_BCEN
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.76222	50.7	-	CWUD01	424	5515	4520	7/16/15	2/24/17	Scaffold	SC	SAMEA3345023	GCA_001248425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/425/GCA_001248425.1_H14134026501	-	26501ss_1
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54386	38.3	-	FJMJ01	34	3245	3112	2/20/16	3/27/17	Contig	SC	SAMEA2077986	GCA_900056245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/245/GCA_900056245.1_10625_3_66	-	2532STDY5467635
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.12575	41.3	-	CEDN01	109	2122	1980	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233900	GCA_000945775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/775/GCA_000945775.1_Velvet_assembly	-	LS2C
Streptococcus agalactiae FSL S3-001	1154805	PRJNA86201	86201	Terrabacteria group	Firmicutes	2.05865	35.3	-	ANCX01	22	2126	2018	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991072	GCA_000311505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/505/GCA_000311505.1_ASM31150v1	-	FSL S3-001
Acinetobacter baumannii IS-251	903906	PRJNA53411	53411	Proteobacteria	Gammaproteobacteria	4.00729	38.9	-	AMEJ01	72	3914	3763	10/9/12	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00761222	GCA_000304655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/655/GCA_000304655.1_gacin18v1.0	-	IS-251
Pseudomonas aeruginosa BWH060	1418246	PRJNA227543	227543	Proteobacteria	Gammaproteobacteria	6.78545	66.2	-	JIEQ01	6	6419	6200	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02402444	GCA_000629385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/385/GCA_000629385.1_Pseu_aeru_BWH060_V1	-	BWH060
Leptospira interrogans serovar Copenhageni str. Fiocruz LV212	996814	PRJNA63725	63725	Spirochaetes	Spirochaetia	4.54751	35	-	AFJS01	403	4097	3727	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254381	GCA_000217355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/355/GCA_000217355.2_CLC_glsol082	-	Fiocruz LV212
Streptococcus pyogenes	1314	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.76299	38.4	-	JULO01	43	1741	1674	7/10/15	3/26/17	Contig	University of Washington	SAMN03198190	GCA_001076015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/015/GCA_001076015.1_ASM107601v1	26230489	970_SDYS
Neisseria meningitidis NM80	1145193	PRJNA83599	83599	Proteobacteria	Betaproteobacteria	2.11674	51.9	-	APVB01	151	2441	2085	5/1/13	3/21/17	Contig	IGS	SAMN01780169	GCA_000387265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/265/GCA_000387265.2_ASM38726v2	-	NM80
Helicobacter pylori Hp A-5	992033	PRJNA64093	64093	Proteobacteria	delta/epsilon subdivisions	1.63593	39.2	-	AKOB01	7	1592	1445	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778869	GCA_000275045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/045/GCA_000275045.1_ASM27504v1	23661595	Hp A-5
Streptococcus pneumoniae 88-1	1367483	PRJNA212772	212772	Terrabacteria group	Firmicutes	2.0618	39.6	-	AUYI01	72	2279	2023	9/17/13	3/9/17	Contig	Center for Genomic Sciences	SAMN02393759	GCA_000468415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/415/GCA_000468415.1_CGSSp88-1	-	88-1
Spiroplasma atrichopogonis	1114980	PRJNA253349	253349	Terrabacteria group	Tenericutes	1.16048	29.3	chromosome:NZ_CP011855.1/CP011855.1	-	1	1239	1137	6/17/15	4/10/17	Complete Genome	Academia Sinica	SAMN03488049	GCA_001029245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/245/GCA_001029245.1_ASM102924v1	26254485	GNAT3597
Mycobacterium tuberculosis MD18096	1447457	PRJNA234570	234570	Terrabacteria group	Actinobacteria	4.38877	65.6	-	JLFW01	88	4316	4101	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584608	GCA_000650135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/135/GCA_000650135.1_Myco_tube_MD18096_V1	-	MD18096
Bacillus cereus	1396	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.13241	35.4	-	MUAG01	91	5378	5082	3/3/17	3/6/17	Contig	Cornell University	SAMN06242082	GCA_002014485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/485/GCA_002014485.1_ASM201448v1	-	FSL J3-0123
Staphylococcus epidermidis	1282	PRJNA303006	303006	Terrabacteria group	Firmicutes	2.40576	32.1	-	LYLQ01	59	2363	2222	7/20/17	7/22/17	Contig	NHGRI	SAMN04287039	GCA_002221945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/945/GCA_002221945.1_ASM222194v1	28679656	ABKWQ
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09779	37.7	-	JOXJ01	21	3204	3099	7/15/14	2/26/17	Contig	Cornell University	SAMN02741492	GCA_000726355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/355/GCA_000726355.1_ASM72635v1	-	FSL R8-5646
Yersinia pestis F1946001	755907	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.46371	47.5	-	ADSB01	1383	4298	3880	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403075	GCA_000324825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/825/GCA_000324825.1_ASM32482v1	23271803	F1946001
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.74184	30.2	-	CUVG01	17	1825	1693	3/31/15	3/18/17	Contig	SC	SAMEA1400845	GCA_001224485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/485/GCA_001224485.1_7213_3_77	-	OXC6622
Mycoplasma bovis CQ-W70	1316930	PRJNA196468	196468	Terrabacteria group	Tenericutes	0.948516	29.3	chromosome:NZ_CP005933.1/CP005933.1	-	1	813	740	5/27/14	4/2/17	Complete Genome	ChongQing Animal Disease Prevention and Control Centre	SAMN03081467	GCA_000696015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/015/GCA_000696015.1_ASM69601v1	-	CQ-W70
Staphylococcus aureus M0328	1157021	PRJNA88599	88599	Terrabacteria group	Firmicutes	2.91502	33.1	-	AIWH01	4	3027	2866	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792146	GCA_000360765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/765/GCA_000360765.1_Stap_aure_M0328_V1	-	M0328
Staphylococcus aureus M0329	1157022	PRJNA88601	88601	Terrabacteria group	Firmicutes	2.93702	32.8	-	AIWI01	10	3077	2888	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00792147	GCA_000360785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/785/GCA_000360785.1_Stap_aure_M0329_V1	-	M0329
Mycoplasma bovis HB0801	767465	PRJNA49159	49159	Terrabacteria group	Tenericutes	0.991702	29.3	chromosome:NC_018077.1/CP002058.1	-	1	845	764	6/19/12	3/30/17	Complete Genome	State Key Laboratory of Agricultural Microbiology(AML)	SAMN02603874	GCA_000270525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/525/GCA_000270525.1_ASM27052v1	22693604	HB0801
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69361	30.5	-	CUKM01	14	1771	1664	3/31/15	3/18/17	Contig	SC	SAMEA1010623	GCA_001224585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/585/GCA_001224585.1_7038_3_78	-	OXC6328
Yersinia pestis F1954001	755890	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.521	47.5	-	ADSC01	1058	4419	4027	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403076	GCA_000324845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/845/GCA_000324845.1_ASM32484v1	23271803	F1954001
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.0634	37.9	-	JOXE01	23	3106	3012	7/15/14	2/26/17	Contig	Cornell University	SAMN02741487	GCA_000726385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/385/GCA_000726385.1_ASM72638v1	-	FSL R8-5543
Staphylococcus epidermidis	1282	PRJNA395369	395369	Terrabacteria group	Firmicutes	2.53907	31.8	-	NPDA01	351	2476	2349	8/28/17	8/30/17	Contig	Bielefeld University	SAMN07372730	GCA_002271435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/435/GCA_002271435.1_assembly-7759_v1	-	7759
Bacillus cereus	1396	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.66833	35.2	-	MUAL01	314	5967	5503	3/3/17	3/6/17	Contig	Cornell University	SAMN06242076	GCA_002014575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/575/GCA_002014575.1_ASM201457v1	-	FSL M7-1219
Mycobacterium tuberculosis MD17973	1447458	PRJNA234571	234571	Terrabacteria group	Actinobacteria	4.38583	65.6	-	JLFV01	92	4329	4111	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584609	GCA_000650155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/155/GCA_000650155.1_Myco_tube_MD17973_V1	-	MD17973
Mycoplasma bovis Hubei-1	956483	PRJNA62195	62195	Terrabacteria group	Tenericutes	0.948121	29.3	chromosome:NC_015725.1/CP002513.1	-	1	813	731	6/27/11	3/30/17	Complete Genome	Harbin Veterinary Research Institute	SAMN02603302	GCA_000219375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/375/GCA_000219375.1_ASM21937v1	21731639	Hubei-1
Streptococcus pneumoniae 439-1	1367482	PRJNA212771	212771	Terrabacteria group	Firmicutes	2.06556	39.6	-	AUYJ01	68	2292	2039	9/17/13	3/9/17	Contig	Center for Genomic Sciences	SAMN02393758	GCA_000468435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/435/GCA_000468435.1_CGSSp439-1	-	439-1
Helicobacter pylori Hp A-9	992034	PRJNA64095	64095	Proteobacteria	delta/epsilon subdivisions	1.71493	38.7	-	AKOC01	17	1681	1494	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778864	GCA_000275065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/065/GCA_000275065.2_ASM27506v2	-	Hp A-9
Neisseria meningitidis NM165	1145194	PRJNA83601	83601	Proteobacteria	Betaproteobacteria	2.11121	51.9	-	APVC01	138	2390	2038	5/1/13	3/21/17	Contig	IGS	SAMN01780170	GCA_000387285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/285/GCA_000387285.2_ASM38728v2	-	NM165
Streptococcus pyogenes serotype M18	301451	PRJEB7108	279941	Terrabacteria group	Firmicutes	1.86274	38.4	-	CDHB01	235	1990	1781	3/31/15	3/27/17	Contig	IZSLER	SAMEA2734413	GCA_001369095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/369/095/GCA_001369095.1_M18GASBO1	-	CPre
Leptospira interrogans serovar Copenhageni str. Fiocruz LV204	996813	PRJNA63723	63723	Spirochaetes	Spirochaetia	4.54561	35	-	AFJR01	463	4099	3727	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254375	GCA_000217375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/375/GCA_000217375.2_CLC_glsol081	-	Fiocruz LV204
Pseudomonas aeruginosa BWH059	1418245	PRJNA227542	227542	Proteobacteria	Gammaproteobacteria	6.68255	66	-	JIER01	10	6408	6231	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02402443	GCA_000629405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/405/GCA_000629405.1_Pseu_aeru_BWH059_V1	-	BWH059
Acinetobacter baumannii Naval-72	903908	PRJNA53415	53415	Proteobacteria	Gammaproteobacteria	3.84045	38.8	-	AMFI01	52	3682	3478	10/9/12	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00761229	GCA_000304675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/675/GCA_000304675.1_GACIN20v1.0	-	Naval-72
Streptococcus agalactiae CCUG 29376	1105255	PRJNA86217	86217	Terrabacteria group	Firmicutes	2.18732	35.4	-	ANDB01	24	2258	2163	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991064	GCA_000311525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/525/GCA_000311525.1_ASM31152v1	-	CCUG 29376
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.15843	41.1	-	CEEG01	157	2189	2030	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233917	GCA_000945795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/795/GCA_000945795.1_Velvet_assembly	-	LS4E
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.38518	38.3	-	FJEC01	21	3069	2950	2/20/16	3/27/17	Contig	SC	SAMEA2059990	GCA_900056655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/655/GCA_900056655.1_10771_1_53	-	2531STDY5467334
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.9665	50.4	-	CWWE01	494	5546	4803	7/16/15	2/24/17	Scaffold	SC	SAMEA3345085	GCA_001248445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/445/GCA_001248445.1_Sg_201401573_GTGGCC_L001	-	201401573_1
Burkholderia cenocepacia	95486	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	7.97084	66.9	-	JVKO01	467	7652	7051	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197540	GCA_001072455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/455/GCA_001072455.1_ASM107245v1	26230489	35_BMUL
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.01291	68.2	-	LWUW01	270	7261	6704	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208560	GCA_001976245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/245/GCA_001976245.1_ASM197624v1	-	2002721787
Vibrio cholerae CP1114	1235456	PRJNA175907	175907	Proteobacteria	Gammaproteobacteria	3.92554	47.4	-	AMWV01	199	3651	3510	5/2/13	3/23/17	Contig	CosmosID	SAMN02469661	GCA_000387685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/685/GCA_000387685.1_BJG-01	-	CP1114
Clostridioides difficile 5.3	1440056	PRJNA232267	232267	Terrabacteria group	Firmicutes	4.00932	28.3	-	AZSH01	27	3705	3574	3/10/14	3/16/17	Contig	"ithree institute, University of Technology Sydney"	SAMN02472442	GCA_000586575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/575/GCA_000586575.1_WHS13_S12	-	5.3
Vibrio parahaemolyticus S011	1394558	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.07005	45.3	-	AWMY01	371	4862	4629	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338872	GCA_000491955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/955/GCA_000491955.1_S011	-	S011
Klebsiella pneumoniae BWH 45	1438703	PRJNA234122	234122	Proteobacteria	Gammaproteobacteria	6.0258	56.8	-	JMWE01	13	6132	5861	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581255	GCA_000693055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/055/GCA_000693055.1_Kleb_pneu_BWH_45_V1	-	BWH 45
Enterococcus faecalis EnGen0199	1157383	PRJNA88399	88399	Terrabacteria group	Firmicutes	3.25567	37.2	-	AIQJ01	21	3410	3260	5/3/13	3/24/17	Scaffold	Broad Institute	SAMN00808876	GCA_000396085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/085/GCA_000396085.1_Ente_faec_B1933_V1	-	B1933
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.12923	52.4	-	MBAO01	169	2472	2175	11/1/16	4/10/17	Contig	Orebro University Hospital	SAMN04852969	GCA_001858745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/745/GCA_001858745.1_ASM185874v1	-	USO_G09-145
Enterococcus faecium LA4B-2	1244150	PRJNA177760	177760	Terrabacteria group	Firmicutes	2.70594	37.6	-	ATIX01	69	2781	2615	6/25/13	3/24/17	Scaffold	The Genome Institute	SAMN02436770	GCA_000415365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/365/GCA_000415365.1_ASM41536v1	-	LA4B-2
Streptococcus equi subsp. zooepidemicus Sz105	1381089	PRJNA214018	214018	Terrabacteria group	Firmicutes	1.99646	41.6	-	JATZ01	73	1865	1836	2/17/15	2/17/15	Contig	Copenhagen University	SAMN02298722	GCA_000876195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/195/GCA_000876195.1_ASM87619v1	-	Sz105
Mycoplasma bovis PG45	289397	PRJNA12525	12525	Terrabacteria group	Tenericutes	1.0034	29.3	chromosome:NC_014760.1/CP002188.1	-	1	870	779	11/30/10	3/30/17	Complete Genome	TIGR	SAMN02604028	GCA_000183385.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/385/GCA_000183385.1_ASM18338v1	21134966	PG45
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.16257	59.4	-	FCKR01	16	4907	4764	1/21/16	3/27/17	Scaffold	SC	SAMEA2274037	GCA_001539445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/445/GCA_001539445.1_12082_3_62	-	2880STDY5682965
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.83245	31.1	-	FBAW01	54	1887	1768	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683087	GCA_001488175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/175/GCA_001488175.1_SWAN254	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.16192	54.9	-	FJWS01	65	5109	4859	4/5/16	3/28/17	Scaffold	SC	SAMEA2273296	GCA_900075175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/175/GCA_900075175.1_11983_7_72	-	e1153
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.04766	64.2	-	FSBS01	32	5047	4904	12/14/16	3/21/17	Contig	SC	SAMEA2068814	GCA_900132505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/505/GCA_900132505.1_10665_4_81	-	336
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.49981	67.2	-	LPMZ01	157	6769	6323	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449686	GCA_001534425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/425/GCA_001534425.1_ASM153442v1	-	MSMB1540WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.62373	55.8	-	LVUU01	57	4447	4272	4/25/16	3/28/17	Contig	JCVI	SAMN04572696	GCA_001631235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/235/GCA_001631235.1_ASM163123v1	-	GN05911
Pseudomonas sp. MF6396	1960828	PRJNA374965	374965	Proteobacteria	Gammaproteobacteria	6.02763	63.9	-	MVOK01	102	5609	5397	3/6/17	3/9/17	Contig	Nofima	SAMN06340224	GCA_002018915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/915/GCA_002018915.1_ASM201891v1	-	MF6396
Streptomyces sp. XY37	1519478	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.14906	72.4	-	LGDN01	202	7355	6998	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900625	GCA_001279815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/815/GCA_001279815.1_ASM127981v1	-	XY37
Bacillus sp. JCM 19059	1481929	PRJDB1711	252074	Terrabacteria group	Firmicutes	4.00348	40	-	BAXS01	36	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000390	GCA_001310655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/655/GCA_001310655.1_ASM131065v1	-	JCM 19059
Bacillus sp. P003	1804208	PRJNA238534	238534	Terrabacteria group	Firmicutes	3.67245	41.6	-	LMZD01	35	3689	3588	2/22/16	2/22/16	Contig	University of Illinois	SAMN03327475	GCA_001566315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/315/GCA_001566315.1_ASM156631v1	-	P003
Streptomyces sp. XY533	1519481	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.27819	72.4	-	LGDL01	254	7527	7202	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900629	GCA_001279845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/845/GCA_001279845.1_ASM127984v1	-	XY533
Pseudomonas sp. T	1938440	PRJNA361506	361506	Proteobacteria	Gammaproteobacteria	6.76322	65.2	-	MUHV01	106	6152	5999	4/5/17	4/8/17	Contig	CONICET-CINDEFI- La Plata	SAMN06234460	GCA_002079985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/079/985/GCA_002079985.1_ASM207998v1	-	T
Enterobacter hormaechei subsp. oharae	301102	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.80848	55.4	-	LVTV01	76	4715	4496	4/25/16	3/28/17	Contig	JCVI	SAMN04572594	GCA_001631265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/265/GCA_001631265.1_ASM163126v1	-	GN04900
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.57786	67.3	-	LPNB01	96	6818	6445	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449688	GCA_001534445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/445/GCA_001534445.1_ASM153444v1	-	MSMB1635WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.27229	64.1	-	FSCA01	23	5349	5168	12/14/16	3/21/17	Contig	SC	SAMEA2068953	GCA_900132585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/585/GCA_900132585.1_10250_1_11	-	351
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.94639	55.4	-	FJXM01	58	4887	4639	4/5/16	3/28/17	Scaffold	SC	SAMEA2273486	GCA_900075185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/185/GCA_900075185.1_12045_5_63	-	e1028
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.70113	31.3	-	FBJX01	35	1779	1685	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683321	GCA_001488195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/195/GCA_001488195.1_p546B	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.21127	60	-	FCMT01	37	4929	4763	1/21/16	3/27/17	Scaffold	SC	SAMEA2274072	GCA_001539465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/465/GCA_001539465.1_12082_5_50	-	2880STDY5683000
Methanothermococcus okinawensis IH1	647113	PRJNA43653	43653	Euryarchaeota	Methanococci	1.67745	29.2777	chromosome:NC_015636.1/CP002792.1; plasmid pMETOK01:NC_015632.1/CP002793.1	-	2	1681	1576	6/6/11	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00100784	GCA_000179575.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/575/GCA_000179575.2_ASM17957v2	-	IH1
Streptococcus equi subsp. zooepidemicus Sz4is	1381082	PRJNA214018	214018	Terrabacteria group	Firmicutes	2.28956	40.8	-	JAUE01	113	2116	2090	2/17/15	2/17/15	Contig	Copenhagen University	SAMN02298715	GCA_000876215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/215/GCA_000876215.1_ASM87621v1	-	Sz4is
Enterococcus faecium BM4538	1391467	PRJNA216994	216994	Terrabacteria group	Firmicutes	3.1339	38.2	-	AXOJ01	12	3242	2995	10/22/13	3/24/17	Scaffold	Broad Institute	SAMN02333864	GCA_000479125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/125/GCA_000479125.1_Ente_faec_BM4538_V1	-	BM4538
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.10738	52.4	-	MBAP01	178	2437	2127	11/1/16	4/10/17	Contig	Orebro University Hospital	SAMN04852970	GCA_001858755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/755/GCA_001858755.1_ASM185875v1	-	USO_AT10-159
Enterococcus faecalis EnGen0200	1157384	PRJNA88401	88401	Terrabacteria group	Firmicutes	3.3291	37.1	-	AIQK01	21	3513	3349	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808877	GCA_000396105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/105/GCA_000396105.1_Ente_faec_B2202_V1	-	B2202
Klebsiella pneumoniae BWH 46	1438704	PRJNA234123	234123	Proteobacteria	Gammaproteobacteria	5.24573	57.5	-	JMWF01	7	5198	4942	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581256	GCA_000693075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/075/GCA_000693075.1_Kleb_pneu_BWH_46_V1	-	BWH 46
Vibrio parahaemolyticus S009	1394557	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.07369	45.3	-	AWMZ01	509	4851	4625	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338871	GCA_000491975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/975/GCA_000491975.1_S009	-	S009
Clostridioides difficile	1496	PRJEB5538	270605	Terrabacteria group	Firmicutes	4.28202	28.7	-	CCDW01	103	3998	3840	12/16/14	3/16/17	Contig	ISS	SAMEA2547817	GCA_000821005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/005/GCA_000821005.1_CII7xCD13A	-	CII7xCD13A
Vibrio cholerae CP1117	1235442	PRJNA175896	175896	Proteobacteria	Gammaproteobacteria	3.92555	47.4	-	AMWW01	183	3641	3505	5/2/13	3/23/17	Contig	CosmosID	SAMN02469665	GCA_000387705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/705/GCA_000387705.1_BJG-01	-	CP1117
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.19333	68	-	LWUZ01	236	7451	6854	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208563	GCA_001976255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/255/GCA_001976255.1_ASM197625v1	-	2002721772
Burkholderia cenocepacia	95486	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	7.84861	66.9	-	JVDK01	1155	7795	6542	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197726	GCA_001073275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/275/GCA_001073275.1_ASM107327v1	26230489	530_BMUL
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.47498	50.9	-	CXEF01	451	4786	4278	7/16/15	2/24/17	Scaffold	SC	SAMEA954630	GCA_001248485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/485/GCA_001248485.1_5417_1_6	-	20040880_1361372
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.2944	38.2	-	FJAX01	21	3011	2909	2/20/16	3/27/17	Contig	SC	SAMEA2058283	GCA_900056915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/915/GCA_900056915.1_10771_1_34	-	2531STDY5467315
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.12318	41.1	-	CEET01	148	2153	2010	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233893	GCA_000945875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/875/GCA_000945875.1_Velvet_assembly	-	LS1F
Streptococcus agalactiae CCUG 30636	1105257	PRJNA86221	86221	Terrabacteria group	Firmicutes	2.0568	35.3	-	ANDD01	22	2120	2015	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991065	GCA_000311545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/545/GCA_000311545.1_ASM31154v1	-	CCUG 30636
Acinetobacter baumannii IS-235	903905	PRJNA53409	53409	Proteobacteria	Gammaproteobacteria	4.06039	38.9	-	AMEI01	76	3998	3828	10/9/12	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00761221	GCA_000304695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/695/GCA_000304695.1_gacin17v1.0	-	IS-235
Pseudomonas aeruginosa BWH058	1418244	PRJNA227541	227541	Proteobacteria	Gammaproteobacteria	6.69888	66.1	-	JIES01	5	6338	6173	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02402442	GCA_000629425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/425/GCA_000629425.1_Pseu_aeru_BWH058_V1	-	BWH058
Leptospira interrogans serovar Copenhageni str. Fiocruz LV199	996812	PRJNA63721	63721	Spirochaetes	Spirochaetia	4.55209	35	-	AFJQ01	339	4063	3741	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254378	GCA_000217395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/395/GCA_000217395.2_CLC_glsol080	-	Fiocruz LV199
Streptococcus pyogenes serotype M18	301451	PRJEB7108	279941	Terrabacteria group	Firmicutes	1.86267	38.4	-	CDHA01	222	1994	1793	3/31/15	3/27/17	Contig	IZSLER	SAMEA2734414	GCA_001369115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/369/115/GCA_001369115.1_M18GASBO2	-	CPost
Neisseria meningitidis NM3223	1145195	PRJNA83603	83603	Proteobacteria	Betaproteobacteria	2.12085	51.9	-	APVD01	141	2429	2043	5/1/13	3/21/17	Contig	IGS	SAMN01780173	GCA_000387305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/305/GCA_000387305.2_ASM38730v2	-	NM3223
Helicobacter pylori Hp H-24	992039	PRJNA64105	64105	Proteobacteria	delta/epsilon subdivisions	1.67018	39.2	-	AKOG01	8	1643	1465	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778905	GCA_000275085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/085/GCA_000275085.1_ASM27508v1	23661595	Hp H-24
Streptococcus pneumoniae Spain6B	1367481	PRJNA212770	212770	Terrabacteria group	Firmicutes	2.2109	39.5	-	AUYK01	70	2448	2212	9/17/13	3/9/17	Contig	Center for Genomic Sciences	SAMN02393757	GCA_000468455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/455/GCA_000468455.1_CGSSpSPAIN6B	26081630	Spain6B
Marinitoga sp. 1137	1545835	PRJNA231770	231770	Thermotogae	Thermotogae	2.29018	29.2	chromosome:NZ_CP009471.1/CP009471.1	-	1	2163	2086	1/10/17	4/16/17	Complete Genome	University of Oslo	SAMN03069110	GCA_001941525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/941/525/GCA_001941525.1_ASM194152v1	-	1137
Mycobacterium tuberculosis MD18112	1447459	PRJNA234572	234572	Terrabacteria group	Actinobacteria	4.4103	65.6	-	JLFU01	83	4328	4133	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584610	GCA_000650175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/175/GCA_000650175.1_Myco_tube_MD18112_V1	-	MD18112
Bacillus cereus	1396	PRJNA288461	288461	Terrabacteria group	Firmicutes	6.24899	35.1	-	MUAJ01	174	6462	6030	3/3/17	3/6/17	Contig	Cornell University	SAMN06242081	GCA_002014585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/585/GCA_002014585.1_ASM201458v1	-	FSL H8-0485
Staphylococcus epidermidis	1282	PRJNA399602	399602	Terrabacteria group	Firmicutes	2.47422	31.9	-	NRSY01	56	2452	2249	9/8/17	9/11/17	Contig	Northwest A&F University	SAMN07540349	GCA_002288605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/605/GCA_002288605.1_ASM228860v1	-	Y24
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.06112	37.8	-	JOXB01	30	3133	3032	7/15/14	2/26/17	Contig	Cornell University	SAMN02741483	GCA_000726395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/395/GCA_000726395.1_ASM72639v1	-	FSL R8-5449
Yersinia pestis F1984001	755937	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.32655	48.1	-	ADSD01	1467	4175	3772	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403077	GCA_000324865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/865/GCA_000324865.1_ASM32486v1	23271803	F1984001
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.83268	30.2	-	CUWA01	27	1939	1788	3/31/15	3/18/17	Contig	SC	SAMEA1400912	GCA_001224625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/625/GCA_001224625.1_7213_3_95	-	OXC6640
Clostridioides difficile	1496	PRJNA302266	302266	Terrabacteria group	Firmicutes	4.29826	29.2	chromosome:CP013196.1	-	1	4294	4128	11/20/15	4/26/16	Complete Genome	Universidade Federal de Minas Gerais	SAMN04271104	GCA_001447175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/447/175/GCA_001447175.1_ASM144717v1	-	Z31
Staphylococcus aureus M0330	1157023	PRJNA88603	88603	Terrabacteria group	Firmicutes	2.85525	32.9	-	AIWJ01	4	2973	2809	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00792149	GCA_000360805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/805/GCA_000360805.1_Stap_aure_M0330_V1	-	M0330
Staphylococcus aureus M0334	1158522	PRJNA88953	88953	Terrabacteria group	Firmicutes	2.97122	33.2	-	AJCO01	7	3070	2901	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809174	GCA_000360825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/825/GCA_000360825.1_Stap_aure_M0334_V1	-	M0334
Campylobacter ureolyticus RIGS 9880	1032069	PRJNA66811	66811	Proteobacteria	delta/epsilon subdivisions	1.64189	29.2	chromosome:NZ_CP012195.1/CP012195.1	-	1	1684	1594	8/3/15	4/10/17	Complete Genome	"USDA, ARS, WRRC"	SAMN03737995	GCA_001190755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/190/755/GCA_001190755.1_ASM119075v1	26543122	RIGS 9880
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.60917	30.4	-	CUIK01	14	1678	1583	3/31/15	3/18/17	Contig	SC	SAMEA1010392	GCA_001224665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/665/GCA_001224665.1_7038_3_29	-	OXC6278
Yersinia pestis G1996006	755873	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.54268	47.7	-	ADSE01	842	4280	4063	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403078	GCA_000324885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/885/GCA_000324885.1_ASM32488v1	23271803	G1996006
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	2.94887	37.9	-	JOWY01	20	3013	2910	7/15/14	2/26/17	Contig	Cornell University	SAMN02741480	GCA_000726425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/425/GCA_000726425.1_ASM72642v1	-	FSL R8-5402
Staphylococcus epidermidis	1282	PRJNA402084	402084	Terrabacteria group	Firmicutes	2.56442	31.9	-	NTLC01	146	2543	2296	9/16/17	9/16/17	Contig	Universidad Autonoma de Sinaloa	SAMN07618130	GCA_002307395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/395/GCA_002307395.1_ASM230739v1	-	MRSE 52-2
Bacillus cereus	1396	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.51512	35.3	-	MUAM01	71	6034	5633	3/3/17	3/6/17	Contig	Cornell University	SAMN06242077	GCA_002014635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/635/GCA_002014635.1_ASM201463v1	-	FSL M8-0091
Mycobacterium tuberculosis MD17903	1447460	PRJNA234573	234573	Terrabacteria group	Actinobacteria	4.42908	65.6	-	JLFT01	95	4345	4135	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584611	GCA_000650195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/195/GCA_000650195.1_Myco_tube_MD17903_V1	-	MD17903
Spiroplasma syrphidicola EA-1	1276229	PRJNA184748	184748	Terrabacteria group	Tenericutes	1.10734	29.2	chromosome:NC_021284.1/CP005078.1	-	1	1036	989	5/22/13	4/17/17	Complete Genome	Academia Sinica	SAMN02602969	GCA_000400955.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/955/GCA_000400955.1_ASM40095v1	23711669	EA-1
Streptococcus pneumoniae BHN191	1327998	PRJNA198763	198763	Terrabacteria group	Firmicutes	2.14482	39.6	-	ASHN01	94	2363	2075	11/4/13	3/9/17	Contig	"Umea University, Sweden"	SAMN02471309	GCA_000495335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/335/GCA_000495335.1_BHN191_1.0	24009156	BHN191
Helicobacter pylori Hp H-27	992040	PRJNA64107	64107	Proteobacteria	delta/epsilon subdivisions	1.61204	39	-	AKOH01	5	1597	1455	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778914	GCA_000275105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/105/GCA_000275105.1_ASM27510v1	23661595	Hp H-27
Neisseria meningitidis NM23	1145146	PRJNA83505	83505	Proteobacteria	Betaproteobacteria	2.17479	51.9	-	APTG01	139	2515	2158	5/1/13	3/15/17	Contig	IGS	SAMN01780096	GCA_000387325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/325/GCA_000387325.2_ASM38732v2	-	NM23
Streptococcus pyogenes serotype M18	301451	PRJEB7108	279941	Terrabacteria group	Firmicutes	1.81048	38.6	-	CDGS01	294	1935	1736	3/31/15	3/27/17	Contig	IZSLER	SAMEA2734415	GCA_001369135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/369/135/GCA_001369135.1_M18GASBO3	-	B
Leptospira interrogans serovar Copenhageni str. Fiocruz LV192	996811	PRJNA63719	63719	Spirochaetes	Spirochaetia	4.54966	35	-	AFJP01	312	4074	3738	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254377	GCA_000217415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/415/GCA_000217415.2_CLC_glsol079	-	Fiocruz LV192
Pseudomonas aeruginosa BWH057	1418243	PRJNA227540	227540	Proteobacteria	Gammaproteobacteria	6.92495	65.9	-	JIET01	14	6586	6392	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02402441	GCA_000629445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/445/GCA_000629445.1_Pseu_aeru_BWH057_V1	-	BWH057
Acinetobacter baumannii OIFC074	903901	PRJNA53401	53401	Proteobacteria	Gammaproteobacteria	3.93589	39.1	-	AMDE01	66	3854	3651	10/11/12	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00761203	GCA_000305215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/215/GCA_000305215.1_gacin13v1.0	-	OIFC074
Streptococcus agalactiae CCUG 37739	1105259	PRJNA86231	86231	Terrabacteria group	Firmicutes	1.9832	35.2	-	ANDF01	22	2036	1920	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991110	GCA_000311565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/565/GCA_000311565.1_ASM31156v1	-	CCUG 37739
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.12349	41.1	-	CEGU01	127	2145	2008	2/18/15	3/17/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234098	GCA_000945935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/935/GCA_000945935.1_Velvet_assembly	-	S99Q
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.66986	38.3	-	FJDP01	70	3352	3202	2/20/16	3/27/17	Contig	SC	SAMEA1972437	GCA_900056925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/925/GCA_900056925.1_10771_3_24	-	2531STDY5467401
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.89809	50.7	-	CWVN01	437	5563	4746	7/16/15	2/24/17	Scaffold	SC	SAMEA3345077	GCA_001248525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/525/GCA_001248525.1_Sg_201400893_GGCTAC_L001	-	201400893_1
Serratia symbiotica str. 'Cinara cedri'	568817	PRJNA32211	32211	Proteobacteria	Gammaproteobacteria	1.76276	29.2	chromosome:CP002295.1	-	1	772	672	12/20/11	1/31/14	Complete Genome	Valencia University	SAMN02604291	GCA_000238975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/975/GCA_000238975.1_ASM23897v1	-	Cinara cedri
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.99846	68.3	-	LWVA01	229	7285	6748	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208564	GCA_001976265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/265/GCA_001976265.1_ASM197626v1	-	2002721788
Vibrio cholerae VCC19	1315314	PRJNA196311	196311	Proteobacteria	Gammaproteobacteria	4.13489	47.2	-	ATEV02	54	4076	3633	7/19/13	3/24/17	Contig	Rede Paraense de genômica e proteômica	SAMN02802538	GCA_000438805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/805/GCA_000438805.2_VCC19	25377699	VCC19
Clostridioides difficile	1496	PRJEB5538	270605	Terrabacteria group	Firmicutes	3.94573	29.3	-	CCEV01	663	3838	3408	12/16/14	3/16/17	Contig	ISS	SAMEA2547866	GCA_000821025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/025/GCA_000821025.1_F17xCD13A	-	F17xCD13A
Vibrio parahaemolyticus S008	1394556	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.07271	45.3	-	AWNA01	440	4865	4616	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338870	GCA_000491995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/491/995/GCA_000491995.1_S008	-	S008
Klebsiella pneumoniae BWH 47	1438705	PRJNA234168	234168	Proteobacteria	Gammaproteobacteria	6.02866	56.4	-	JMWG01	12	6127	5864	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581301	GCA_000693095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/095/GCA_000693095.1_Kleb_pneu_BWH_47_V1	-	BWH 47
Enterococcus faecalis EnGen0201	1157385	PRJNA88403	88403	Terrabacteria group	Firmicutes	3.27664	37.1	-	AIQM01	37	3465	3276	5/3/13	3/24/17	Scaffold	Broad Institute	SAMN00808878	GCA_000396125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/125/GCA_000396125.1_Ente_faec_B2211_V1	-	B2211
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.10066	52.4	-	MBAQ01	170	2436	2138	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04852971	GCA_001858765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/765/GCA_001858765.1_ASM185876v1	-	USO_AT10-167
Enterococcus faecium NEF1	1391466	PRJNA216993	216993	Terrabacteria group	Firmicutes	3.04969	38.5	-	AXOK01	18	3082	2878	10/22/13	3/24/17	Scaffold	Broad Institute	SAMN02333863	GCA_000479145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/145/GCA_000479145.1_Ente_faec_NEF1_V1	-	NEF1
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	4.79176	36.6	-	CWDE01	125	4739	4667	6/24/15	6/24/15	Contig	SC	SAMEA1032888	GCA_001177185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/177/185/GCA_001177185.1_6903_6_3	-	EQUI0148
Marinitoga piezophila KA3	443254	PRJNA66025	66025	Thermotogae	Thermotogae	2.24479	29.1839	chromosome:NC_016751.1/CP003257.1; plasmid pMARPI01:NC_016748.1/CP003258.1	-	2	2107	2033	1/13/12	4/17/17	Complete Genome	JGI	SAMN02261422	GCA_000255135.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/255/135/GCA_000255135.1_ASM25513v1	23045491	KA3
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.21365	59.8	-	FCGN01	17	5006	4848	1/21/16	3/27/17	Scaffold	SC	SAMEA2274079	GCA_001539485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/485/GCA_001539485.1_12045_8_3	-	2880STDY5683008
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.80115	31.1	-	FBGT01	44	1888	1740	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683237	GCA_001488215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/215/GCA_001488215.1_NCTC12569	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.91678	54.9	-	FJXS01	115	4862	4551	4/5/16	3/28/17	Scaffold	SC	SAMEA2273307	GCA_900075195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/195/GCA_900075195.1_11983_7_83	-	e1213
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21782	64.2	-	FVFR01	45	5230	5066	3/10/17	3/18/17	Contig	SC	SAMEA2070676	GCA_900132595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/595/GCA_900132595.1_10250_1_10	-	350
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.83161	67.2	-	LPNC01	140	7146	6762	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449690	GCA_001534465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/465/GCA_001534465.1_ASM153446v1	-	MSMB1941WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.62226	55.7	-	LVUD01	153	4554	4224	4/25/16	3/28/17	Contig	JCVI	SAMN04572602	GCA_001631275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/275/GCA_001631275.1_ASM163127v1	-	GN05420
Pseudomonas sp. Bc-h	1943632	PRJNA361580	361580	Proteobacteria	Gammaproteobacteria	7.0448	59.5	-	MUIN01	73	6341	6166	4/5/17	4/8/17	Contig	CONICET-CINDEFI- La Plata	SAMN06235001	GCA_002080045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/045/GCA_002080045.1_ASM208004v1	-	Bc-h
Streptomyces sp. XY58	1519482	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.14222	72.4	-	LGDK01	232	7363	7001	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900630	GCA_001279855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/855/GCA_001279855.1_ASM127985v1	-	XY58
Bacillus sp. CMAA 1363	1843182	PRJNA319947	319947	Terrabacteria group	Firmicutes	4.95631	38	-	MJGZ01	10	-	-	10/11/16	10/11/16	Contig	Embrapa Environment	SAMN05226113	GCA_001757375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/375/GCA_001757375.1_ASM175737v1	-	CMAA 1363
Bacillus sp. CDB3	360310	PRJNA168601	168601	Terrabacteria group	Firmicutes	5.91573	35.3	-	ALBR01	148	6413	5653	4/6/17	4/6/17	Contig	UOW	SAMN06676449	GCA_002081505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/505/GCA_002081505.1_ASM208150v1	-	CDB3
Streptomyces sp. XY593	1519483	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.33045	72.4	-	LGDJ01	220	7524	7206	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900631	GCA_001279885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/885/GCA_001279885.1_ASM127988v1	-	XY593
Pseudomonas sp. R45(2017)	1981678	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.32491	60.7	-	NEHH01	29	5772	5627	4/27/17	5/3/17	Contig	University of Sao Paulo	SAMN06771396	GCA_002112305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/305/GCA_002112305.1_ASM211230v1	-	R45(2017)
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.77384	55.6	-	LVUI01	185	4732	4380	4/25/16	3/28/17	Contig	JCVI	SAMN04572685	GCA_001631405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/405/GCA_001631405.1_ASM163140v1	-	GN05631
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.13794	67.5	-	LPND01	110	6411	6079	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449691	GCA_001534475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/475/GCA_001534475.1_ASM153447v1	-	MSMB2019WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.04152	64.1	-	FVFO01	15	5045	4916	3/10/17	3/18/17	Contig	SC	SAMEA2070673	GCA_900132615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/615/GCA_900132615.1_10250_1_1	-	341
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.94532	55.1	-	FJWK01	61	4874	4618	4/5/16	3/28/17	Scaffold	SC	SAMEA2273310	GCA_900075205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/205/GCA_900075205.1_11983_7_86	-	e1222
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.80254	31.1	-	FBFZ01	74	1857	1721	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683216	GCA_001488295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/295/GCA_001488295.1_F5A2	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.21734	59.8	-	FCFT01	18	5011	4847	1/21/16	3/27/17	Scaffold	SC	SAMEA2273904	GCA_001539505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/505/GCA_001539505.1_12082_2_40	-	2880STDY5682831
Fusobacterium varium	856	PRJDB5491	407612	Fusobacteria	Fusobacteriia	4.12284	29.1209	chromosome:AP017968.1; plasmid pFV113-g1-1:AP017969.1; plasmid pFV113-g1-2:AP017970.1	-	3	3774	3686	9/16/17	9/16/17	Complete Genome	"Laboratory of Bacterial Genomics, Pathogen Genomics Center, National Institute of Infectious Diseases"	SAMD00073606	GCA_002356455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/455/GCA_002356455.1_ASM235645v1	-	Fv113-g1
Streptococcus equi subsp. equi	148942	PRJEB2635	204219	Terrabacteria group	Firmicutes	2.27515	41.2	-	CWAN01	166	2248	2159	6/24/15	6/24/15	Scaffold	SC	SAMEA1032783	GCA_001175545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/175/545/GCA_001175545.1_6903_3_30	-	EQUI0079
Enterococcus faecium 10/96A	1391465	PRJNA216992	216992	Terrabacteria group	Firmicutes	3.44124	38.2	-	AXOL01	36	3563	3219	10/22/13	3/24/17	Scaffold	Broad Institute	SAMN02333862	GCA_000479165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/165/GCA_000479165.1_Ente_faec_10_96A_V1	-	10/96A
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.11129	52.4	-	MBAR01	140	2451	2124	11/1/16	4/10/17	Contig	Orebro University Hospital	SAMN04852972	GCA_001858785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/785/GCA_001858785.1_ASM185878v1	-	USO_BE10-065
Enterococcus faecalis EnGen0202	1157386	PRJNA88405	88405	Terrabacteria group	Firmicutes	3.29313	37.1	-	AIQO01	40	3475	3301	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808879	GCA_000396145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/145/GCA_000396145.1_Ente_faec_B2277_V1	-	B2277
Klebsiella pneumoniae BWH 48	1438706	PRJNA234169	234169	Proteobacteria	Gammaproteobacteria	5.52775	57.2	-	JMWH01	10	5502	5246	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581302	GCA_000693115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/115/GCA_000693115.1_Kleb_pneu_BWH_48_V1	-	BWH 48
Vibrio parahaemolyticus S005	1394555	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.01184	45.3	-	AWNB01	416	4797	4561	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338869	GCA_000492015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/015/GCA_000492015.1_S005	-	S005
Clostridioides difficile	1496	PRJEB7267	272594	Terrabacteria group	Firmicutes	4.18932	28.8	-	CDND01	1	3890	3691	1/18/15	3/16/17	Contig	PUBLIC HEALTH ENGLAND	SAMEA2768239	GCA_000826625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/625/GCA_000826625.2_G46R2_Q2	-	G46
Vibrio cholerae HC-36A1	991934	PRJNA63875	63875	Proteobacteria	Gammaproteobacteria	3.95943	47.8	-	AXDR01	17	3793	3556	10/18/13	3/24/17	Contig	Institute for Genome Sciences	SAMN02435819	GCA_000474965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/965/GCA_000474965.1_vcoHC36A1	-	HC-36A1
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.9937	68.3	-	LWVB01	143	7285	6770	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208565	GCA_001976275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/275/GCA_001976275.1_ASM197627v1	-	3904b
Burkholderia cenocepacia PC184	350702	PRJNA16169	16169	Proteobacteria	Betaproteobacteria	7.03517	66.5	-	AAKX01	3	5788	5535	1/4/06	2/7/14	Scaffold	Broad Institute	SAMN02595212	GCA_000152565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/565/GCA_000152565.1_ASM15256v1	-	PC184
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.68212	50.7	-	CXGE01	394	5105	4508	7/16/15	2/24/17	Scaffold	SC	SAMEA1013692	GCA_001248545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/545/GCA_001248545.1_6551_1_12	-	SS131636_2798534
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54058	38.3	-	FJJR01	61	3236	3089	2/20/16	3/27/17	Contig	SC	SAMEA2080680	GCA_900056935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/935/GCA_900056935.1_10625_2_68	-	2532STDY5467541
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.15684	41.4	-	CEEL01	58	2073	1965	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233931	GCA_000945975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/975/GCA_000945975.1_Velvet_assembly	-	LS5Y
Streptococcus agalactiae CCUG 44140	1105265	PRJNA86253	86253	Terrabacteria group	Firmicutes	2.04111	35.2	-	ANDL01	22	2104	1988	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991090	GCA_000311585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/585/GCA_000311585.1_ASM31158v1	-	CCUG 44140
Acinetobacter baumannii OIFC098	903902	PRJNA53403	53403	Proteobacteria	Gammaproteobacteria	3.81211	39.1	-	AMDF01	72	3703	3487	10/11/12	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00761228	GCA_000305235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/235/GCA_000305235.1_gacin14v1.0	-	OIFC098
Pseudomonas aeruginosa BWH056	1418242	PRJNA227539	227539	Proteobacteria	Gammaproteobacteria	6.92639	66	-	JIEU01	17	6601	6402	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02402440	GCA_000629465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/465/GCA_000629465.1_Pseu_aeru_BWH056_V1	-	BWH056
Leptospira interrogans serovar Grippotyphosa str. 2006006971	996810	PRJNA63717	63717	Spirochaetes	Spirochaetia	4.80597	35	-	AFJO01	842	4585	3933	6/7/11	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00254370	GCA_000217435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/435/GCA_000217435.2_CLC_glsol035	-	2006006971
Streptococcus pyogenes serotype M18	301451	PRJEB7108	279941	Terrabacteria group	Firmicutes	1.88828	38.4	-	CDGN01	158	1964	1826	3/31/15	3/27/17	Contig	IZSLER	SAMEA2734416	GCA_001369155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/369/155/GCA_001369155.1_M18GASBO4	-	M
Neisseria meningitidis NM32	1145147	PRJNA83507	83507	Proteobacteria	Betaproteobacteria	2.22152	51.9	-	APTH01	141	2559	2177	5/1/13	3/21/17	Contig	IGS	SAMN01780097	GCA_000387345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/345/GCA_000387345.2_ASM38734v2	-	NM32
Helicobacter pylori Hp H-28	992041	PRJNA64109	64109	Proteobacteria	delta/epsilon subdivisions	1.625	39	-	AKOI01	16	1607	1451	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778915	GCA_000275125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/125/GCA_000275125.1_ASM27512v1	-	Hp H-28
Streptococcus pneumoniae BHN427	1330044	PRJNA201085	201085	Terrabacteria group	Firmicutes	2.10849	39.6	-	ASHQ01	76	2328	2079	11/4/13	3/9/17	Contig	"Umea University, Sweden"	SAMN02471305	GCA_000495355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/355/GCA_000495355.1_BH427_1.0	24009156	BHN427
Mycoplasma pullorum	48003	PRJNA350592	350592	Terrabacteria group	Tenericutes	1.00717	29.1	chromosome:NZ_CP017813.1/CP017813.1	-	1	825	758	12/12/16	4/17/17	Complete Genome	University of Pretoria	SAMN05938804	GCA_001900245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/245/GCA_001900245.1_ASM190024v1	-	B359_6
Mycobacterium tuberculosis MD15594	1447461	PRJNA234574	234574	Terrabacteria group	Actinobacteria	4.39043	65.6	-	JLFS01	89	4325	4097	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584612	GCA_000650215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/215/GCA_000650215.1_Myco_tube_MD15594_V1	-	MD15594
Bacillus cereus	1396	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.37055	35.2	-	MUAP01	252	5781	5471	3/3/17	3/6/17	Contig	Cornell University	SAMN06242080	GCA_002014665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/665/GCA_002014665.1_ASM201466v1	-	FSL M8-0473
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09371	37.9	-	JOWZ01	26	3149	3046	7/15/14	2/26/17	Contig	Cornell University	SAMN02741481	GCA_000726445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/445/GCA_000726445.1_ASM72644v1	-	FSL R8-5410
Yersinia pestis G1996010	755872	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.55242	47.6	-	ADSF01	772	4293	4077	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403079	GCA_000324905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/905/GCA_000324905.1_ASM32490v1	23271803	G1996010
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.83827	30.1	-	CUSQ01	53	1948	1794	3/31/15	3/18/17	Contig	SC	SAMEA1401475	GCA_001224805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/805/GCA_001224805.1_7213_3_11	-	OXC6554
Mycoplasma bovigenitalium	2112	PRJDB5264	356119	Terrabacteria group	Tenericutes	0.853553	29.1	chromosome:AP017902.1	-	1	685	623	12/2/16	4/26/17	Complete Genome	"National Institute of Animal Health, National Agriculture and Food Research Organization"	SAMD00065884	GCA_002356075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/356/075/GCA_002356075.1_ASM235607v1	-	HAZ596
Staphylococcus aureus M0340	1157024	PRJNA88605	88605	Terrabacteria group	Firmicutes	2.93354	32.8	-	AIWK01	5	3122	2956	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792150	GCA_000360845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/845/GCA_000360845.1_Stap_aure_M0340_V1	-	M0340
Staphylococcus aureus M0347	1157025	PRJNA88607	88607	Terrabacteria group	Firmicutes	2.88313	32.9	-	AIWL01	4	3024	2857	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792151	GCA_000360865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/865/GCA_000360865.1_Stap_aure_M0347_V1	-	M0347
Blochmannia endosymbiont of Polyrhachis (Hedomyrma) turneri	1505596	PRJNA249056	249056	Proteobacteria	Gammaproteobacteria	0.749321	29.1	chromosome:NZ_CP010048.1/CP010048.1	-	1	642	590	4/20/15	4/10/17	Complete Genome	Duke University	SAMN02808313	GCA_000973505.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/505/GCA_000973505.1_ASM97350v1	25861561	675
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70786	30.3	-	CUIU01	16	1803	1677	3/31/15	3/18/17	Contig	SC	SAMEA1010261	GCA_001224845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/845/GCA_001224845.1_7038_3_37	-	OXC6287
Yersinia pestis G8786	755957	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.3258	47.9	-	ADSG01	829	4092	3821	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403080	GCA_000324925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/925/GCA_000324925.1_ASM32492v1	23271803	G8786
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09507	37.9	-	JOXI01	21	3147	3044	7/15/14	2/26/17	Contig	Cornell University	SAMN02741491	GCA_000726465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/465/GCA_000726465.1_ASM72646v1	-	FSL R8-5610
Bacillus cereus	1396	PRJNA288461	288461	Terrabacteria group	Firmicutes	6.46936	35.1	-	MUAU01	530	7023	6304	3/3/17	3/6/17	Contig	Cornell University	SAMN05953541	GCA_002014705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/705/GCA_002014705.1_ASM201470v1	-	FSL K6-1030
Staphylococcus epidermidis	1282	PRJEB11503	368825	Terrabacteria group	Firmicutes	2.43162	32	-	FUVD01	55	2407	2276	2/17/17	2/23/17	Contig	IFH_MS	SAMEA4470458	GCA_900108795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/795/GCA_900108795.1_PEI-B-P-06	-	-
Mycobacterium tuberculosis MD16728	1447462	PRJNA234575	234575	Terrabacteria group	Actinobacteria	4.42343	65.6	-	JLFR01	85	4340	4126	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584613	GCA_000650235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/235/GCA_000650235.1_Myco_tube_MD16728_V1	-	MD16728
Clostridioides difficile	1496	PRJEB7371	269262	Terrabacteria group	Firmicutes	4.29305	29.1	chromosome 1:NZ_LN614756.1/LN614756.1	-	1	4044	3841	12/4/14	3/17/17	Complete Genome	WTSI	SAMEA2780266	GCA_000953275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/275/GCA_000953275.1_CD630DERM	-	630Derm
Streptococcus pneumoniae BHN418	1330041	PRJNA201081	201081	Terrabacteria group	Firmicutes	2.06337	39.6	-	ASHP01	68	2243	2021	11/4/13	3/9/17	Contig	"Umea University, Sweden"	SAMN02471310	GCA_000495375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/375/GCA_000495375.1_BHN418_1.0	24009156	BHN418
Helicobacter pylori Hp P-25d	992112	PRJNA64251	64251	Proteobacteria	delta/epsilon subdivisions	1.65766	39.2	-	AKQL01	9	1642	1492	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778897	GCA_000275145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/145/GCA_000275145.2_ASM27514v2	-	Hp P-25d
Neisseria meningitidis NM35	1145148	PRJNA83509	83509	Proteobacteria	Betaproteobacteria	2.17073	52	-	APTI01	128	2512	2132	5/1/13	3/15/17	Contig	IGS	SAMN01780098	GCA_000387365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/365/GCA_000387365.2_ASM38736v2	-	NM35
Streptococcus pyogenes serotype M18	301451	PRJEB7108	279941	Terrabacteria group	Firmicutes	1.91809	38.4	-	CDGQ01	96	2053	1877	3/31/15	3/27/17	Contig	IZSLER	SAMEA2734417	GCA_001369175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/369/175/GCA_001369175.1_M18GASBO5	-	DI
Leptospira interrogans serovar Manilae str. M001_Tn_Mutant_Parent	1085548	PRJNA74177	74177	Spirochaetes	Spirochaetia	4.59242	35	-	AHPR01	271	4151	3761	2/3/12	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00739360	GCA_000245995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/995/GCA_000245995.2_CLC_glsol001	-	M001_Tn_Mutant_Parent
Pseudomonas aeruginosa BWH055	1418241	PRJNA227538	227538	Proteobacteria	Gammaproteobacteria	6.44276	66.2	-	JIEV01	4	6077	5897	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02402439	GCA_000629485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/485/GCA_000629485.1_Pseu_aeru_BWH055_V1	-	BWH055
Acinetobacter baumannii OIFC180	903903	PRJNA53405	53405	Proteobacteria	Gammaproteobacteria	3.98682	39.1	-	AMDQ01	141	3936	3717	10/11/12	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00761237	GCA_000305255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/255/GCA_000305255.1_gacin15v1.0	-	OIFC180
Streptococcus agalactiae CCUG 45061	1105267	PRJNA86257	86257	Terrabacteria group	Firmicutes	2.18238	35.3	-	ANDN01	41	2257	2119	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991099	GCA_000311605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/605/GCA_000311605.1_ASM31160v1	-	CCUG 45061
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.11621	41.2	-	CEDR01	123	2074	1946	2/14/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233903	GCA_000945995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/995/GCA_000945995.1_Velvet_assembly	-	LS2K
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54168	38.3	-	FJJU01	62	3239	3089	2/20/16	3/27/17	Contig	SC	SAMEA2077543	GCA_900056945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/945/GCA_900056945.1_10625_2_67	-	2532STDY5467540
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.66434	50.7	-	CXFB01	377	5112	4480	7/16/15	2/24/17	Scaffold	SC	SAMEA954659	GCA_001248565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/565/GCA_001248565.1_6246_5_1	-	SS132068_2496118
Burkholderia cenocepacia KC-01	1396830	PRJNA217851	217851	Proteobacteria	Betaproteobacteria	5.83509	66.9	-	AWOP01	283	5306	5306	11/13/13	1/8/14	Contig	Institute of Microbial Technology	SAMN02469983	GCA_000498115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/115/GCA_000498115.1_Burkholderia_cenocepacia_KC-01	-	KC-01
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.19508	68.1	-	LWVF01	198	7425	6875	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208569	GCA_001976325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/325/GCA_001976325.1_ASM197632v1	-	3913a
Vibrio cholerae O1 biovar El Tor str. Ogawa RND19187	1416747	PRJNA226195	226195	Proteobacteria	Gammaproteobacteria	4.00166	47.5	-	AYNM01	203	3749	3638	12/2/13	3/24/17	Contig	Central Research Institute for Epidemiology	SAMN02469780	GCA_000500675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/675/GCA_000500675.1_RND19187_v1	25035324	Ogawa RND19187
Clostridioides difficile	1496	PRJDB4029	289860	Terrabacteria group	Firmicutes	4.04008	28.4	-	BBYB01	277	3699	3579	7/7/15	3/18/17	Contig	Rakuno Gakuen University	SAMD00034907	GCA_001192735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/735/GCA_001192735.1_ASM119273v1	-	KY62
Vibrio parahaemolyticus S004	1394554	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.01047	45.3	-	AWNC01	704	4807	4530	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338868	GCA_000492035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/035/GCA_000492035.1_S004	-	S004
Klebsiella pneumoniae CHS 02	1438708	PRJNA234171	234171	Proteobacteria	Gammaproteobacteria	6.05741	56.7	-	JMWI01	26	6087	5763	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581304	GCA_000693135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/135/GCA_000693135.1_Kleb_pneu_CHS_02_V1	-	CHS 02
Enterococcus faecalis EnGen0203	1157387	PRJNA88407	88407	Terrabacteria group	Firmicutes	3.28563	37.1	-	AIQU01	43	3427	3274	5/3/13	3/24/17	Scaffold	Broad Institute	SAMN00808881	GCA_000396165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/165/GCA_000396165.1_Ente_faec_B2670_V1	-	B2670
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.11108	52.4	-	MBAS01	158	2456	2130	11/1/16	4/10/17	Contig	Orebro University Hospital	SAMN04852973	GCA_001858825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/825/GCA_001858825.1_ASM185882v1	-	USO_GR10-009
Enterococcus faecium	1352	PRJNA260790	260790	Terrabacteria group	Firmicutes	2.64221	38	-	JRGX01	68	2672	2397	11/25/14	4/10/17	Scaffold	IEM RAMS	SAMN03031299	GCA_000787055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/055/GCA_000787055.1_ASM78705v1	26823581	L-3
Clostridioides difficile	1496	PRJNA326584	326584	Terrabacteria group	Firmicutes	4.30093	29.0978	chromosome:NZ_CP016318.1/CP016318.1; plasmid pCD630:NZ_CP016319.1/CP016319.1	-	2	4051	3841	4/5/17	8/3/17	Complete Genome	Norddeutsches Zentrum für Mikrobielle Genomforschung	SAMN05285388	GCA_002080065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/065/GCA_002080065.1_ASM208006v1	28357980	630 delta erm
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.20106	60	-	FCMV01	26	4923	4756	1/21/16	3/27/17	Scaffold	SC	SAMEA2274097	GCA_001539525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/525/GCA_001539525.1_12082_5_52	-	2880STDY5683027
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.60452	31.8	-	FBKT01	53	1606	1541	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683346	GCA_001488335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/335/GCA_001488335.1_H070380306	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.79015	55.5	-	FJXF01	62	4720	4485	4/5/16	3/28/17	Scaffold	SC	SAMEA2273306	GCA_900075215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/215/GCA_900075215.1_11983_7_82	-	e1198
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.12611	64.1	-	FSCB01	14	5138	5040	12/14/16	3/21/17	Contig	SC	SAMEA2070770	GCA_900132655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/655/GCA_900132655.1_10250_1_13	-	353
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.38501	67.5	-	LPLW01	99	6708	6354	1/25/16	6/28/17	Contig	Northern Arizona University	SAMN03449656	GCA_001534805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/805/GCA_001534805.1_ASM153480v1	-	MSMB788WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.85317	55.4	-	LVTR01	79	4755	4529	4/25/16	3/28/17	Contig	JCVI	SAMN04572592	GCA_001631425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/425/GCA_001631425.1_ASM163142v1	-	GN04697
Pseudomonas sp. R47(2017)	1981677	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.41416	60.6	-	NEHG01	21	5880	5737	4/27/17	5/3/17	Contig	University of Sao Paulo	SAMN06771397	GCA_002112315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/315/GCA_002112315.1_ASM211231v1	-	R47(2017)
Streptomyces sp. XY66	1415563	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.53104	72.3	-	LGDI01	260	7754	7359	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900632	GCA_001279905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/905/GCA_001279905.1_ASM127990v1	-	XY66
Streptomyces sp. H036	1519487	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.62198	72.3	-	LGDS01	207	7816	7495	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900638	GCA_001279925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/925/GCA_001279925.1_ASM127992v1	-	H036
Pseudomonas sp. R39(2017)	1981683	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.26952	60.3	-	NEHM01	21	5774	5623	4/27/17	5/3/17	Contig	University of Sao Paulo	SAMN06771391	GCA_002112385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/385/GCA_002112385.1_ASM211238v1	-	R39(2017)
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.96977	55.4	-	LVVC01	74	4861	4618	4/25/16	3/28/17	Contig	JCVI	SAMN04572703	GCA_001631455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/455/GCA_001631455.1_ASM163145v1	-	GN06257
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.6276	67.2	-	LPGA01	115	6978	6601	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449500	GCA_001536785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/785/GCA_001536785.1_ASM153678v1	-	MSMB1518WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.8899	64.1	-	FSCC01	14	4839	4733	12/14/16	3/21/17	Contig	SC	SAMEA2071449	GCA_900132665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/665/GCA_900132665.1_10250_1_15	-	355
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.48039	54.9	-	FKIV01	30	5509	5253	4/14/16	3/28/17	Scaffold	SC	SAMEA2273283	GCA_900075225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/225/GCA_900075225.1_11983_7_59	-	e1034
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.85929	30.9	-	FBPZ01	84	1957	1835	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683480	GCA_001488355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/355/GCA_001488355.1_H081380695b	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.35814	59.9	-	FCKE01	32	5145	4970	1/21/16	3/27/17	Scaffold	SC	SAMEA2274025	GCA_001539545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/545/GCA_001539545.1_12082_3_50	-	2880STDY5682953
Clostridioides difficile 630	272563	PRJNA78	78	Terrabacteria group	Firmicutes	4.29813	29.0978	chromosome:NC_009089.1/AM180355.1; plasmid pCD630:NC_008226.1/AM180356.1	-	2	3982	3767	6/27/06	11/17/16	Complete Genome	Sanger Institute	SAMEA1705932	GCA_000009205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/205/GCA_000009205.1_ASM920v1	"1,680,454,321,349,980"	630
Enterococcus faecium	1352	PRJNA261381	261381	Terrabacteria group	Firmicutes	2.52141	38.1	-	JUEK01	108	2559	2374	12/18/14	3/25/17	Scaffold	University of Copenhagen	SAMN03072879	GCA_000804385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/385/GCA_000804385.1_70-61-7	-	70-61-7
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.10783	52.4	-	MBAT01	145	2448	2154	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04852974	GCA_001858835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/835/GCA_001858835.1_ASM185883v1	-	USO_GR10-062
Enterococcus faecalis EnGen0204	1157388	PRJNA88409	88409	Terrabacteria group	Firmicutes	3.28749	37.1	-	AIQV01	37	3464	3282	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808882	GCA_000396185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/185/GCA_000396185.1_Ente_faec_B2685_V1	-	B2685
Klebsiella pneumoniae CHS 03	1438709	PRJNA234172	234172	Proteobacteria	Gammaproteobacteria	5.98102	56.8	-	JMWJ01	11	6045	5749	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581305	GCA_000693155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/155/GCA_000693155.1_Kleb_pneu_CHS_03_V1	-	CHS 03
Vibrio parahaemolyticus S003	1394553	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.00226	45.3	-	AWND01	465	4858	4530	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338867	GCA_000492055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/055/GCA_000492055.1_S003	-	S003
Clostridioides difficile	1496	PRJDB4029	289860	Terrabacteria group	Firmicutes	4.03564	28.4	-	BBYC01	324	3689	3573	7/7/15	3/18/17	Contig	Rakuno Gakuen University	SAMD00034908	GCA_001263655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/655/GCA_001263655.1_ASM126365v1	-	KY64
Vibrio cholerae O1 biovar El Tor str. Inaba RND18899	1416748	PRJNA226196	226196	Proteobacteria	Gammaproteobacteria	3.99123	47.5	-	AYNN01	164	3746	3618	12/2/13	3/24/17	Contig	Central Research Institute for Epidemiology	SAMN02469779	GCA_000500695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/695/GCA_000500695.1_RND18899_v1	25035324	Inaba RND18899
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.09797	68.2	-	LWVK01	172	7403	6847	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208574	GCA_001976335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/335/GCA_001976335.1_ASM197633v1	-	4151a
Burkholderia cenocepacia	95486	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	7.31783	66.9	-	JTAZ01	16	6497	5312	11/14/14	7/6/17	Contig	US Food and Drug Administration 	SAMN02700076	GCA_000783555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/555/GCA_000783555.1_ASM78355v1	-	FDAARGOS_82
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.56035	50.4	-	CWTD01	407	5166	4264	7/16/15	2/24/17	Scaffold	SC	SAMEA3345040	GCA_001248585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/585/GCA_001248585.1_H14086038101	-	38101ss_1
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.29493	38.2	-	FJBK01	18	3012	2907	2/20/16	3/27/17	Contig	SC	SAMEA2059980	GCA_900057235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/235/GCA_900057235.1_10771_1_35	-	2531STDY5467316
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.15651	41.2	-	CEDD01	103	2131	2014	2/14/15	3/17/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233884	GCA_000946095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/095/GCA_000946095.1_Velvet_assembly	-	LS0E
Streptococcus agalactiae CCUG 49072	1105269	PRJNA86261	86261	Terrabacteria group	Firmicutes	2.05771	35.3	-	ANDP01	21	2118	2010	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991095	GCA_000311625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/625/GCA_000311625.1_ASM31162v1	-	CCUG 49072
Acinetobacter baumannii OIFC110	903910	PRJNA53419	53419	Proteobacteria	Gammaproteobacteria	3.98167	38.9	-	AMFL01	53	3874	3715	10/11/12	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00761230	GCA_000305275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/275/GCA_000305275.1_gacin22v1.0	-	OIFC110
Pseudomonas aeruginosa BWH054	1418240	PRJNA227537	227537	Proteobacteria	Gammaproteobacteria	7.21885	65.8	-	JIEW01	14	6877	6604	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02402438	GCA_000629505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/505/GCA_000629505.1_Pseu_aeru_BWH054_V1	-	BWH054
Leptospira interrogans serovar Manilae str. M933_lip32_mutant	1085547	PRJNA74179	74179	Spirochaetes	Spirochaetia	4.59468	35	-	AHPS01	271	4152	3752	2/3/12	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00739361	GCA_000246015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/015/GCA_000246015.2_CLC_glsol002	-	M933_lip32_mutant
Streptococcus pyogenes serotype M18	301451	PRJEB7108	279941	Terrabacteria group	Firmicutes	1.82991	38.4	-	CDGM01	81	1894	1769	3/31/15	3/27/17	Contig	IZSLER	SAMEA2734418	GCA_001369195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/369/195/GCA_001369195.1_M18GASBO6	-	DO
Neisseria meningitidis NM36	1145149	PRJNA83511	83511	Proteobacteria	Betaproteobacteria	2.10289	51.9	-	APTJ01	141	2444	2113	5/1/13	3/15/17	Contig	IGS	SAMN01780099	GCA_000387385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/385/GCA_000387385.2_ASM38738v2	-	NM36
Helicobacter pylori Hp A-16	992055	PRJNA64137	64137	Proteobacteria	delta/epsilon subdivisions	1.6378	39.2	-	AKOU01	11	1615	1460	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778861	GCA_000275165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/165/GCA_000275165.1_ASM27516v1	23661595	Hp A-16
Streptococcus pneumoniae BHN237	1330042	PRJNA201082	201082	Terrabacteria group	Firmicutes	2.14262	39.6	-	ASHO01	92	2351	2129	11/4/13	3/9/17	Contig	"Umea University, Sweden"	SAMN02471308	GCA_000495395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/395/GCA_000495395.1_BHN237_1.0	24009156	BHN237
Rickettsia prowazekii	782	PRJNA257008	257008	Proteobacteria	Alphaproteobacteria	1.11177	29	chromosome:NZ_CP014865.1/CP014865.1	-	1	920	869	3/30/16	4/5/17	Complete Genome	µFORGE	SAMN04216069	GCA_001602215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/602/215/GCA_001602215.1_ASM160221v1	-	Naples-1
Mycobacterium tuberculosis MD18498	1447463	PRJNA234576	234576	Terrabacteria group	Actinobacteria	4.40183	65.5	-	JLFQ01	103	4354	4139	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584614	GCA_000650255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/255/GCA_000650255.1_Myco_tube_MD18498_V1	-	MD18498
Staphylococcus epidermidis Scl19	1344994	PRJNA207992	207992	Terrabacteria group	Firmicutes	2.58658	31.9	-	ATDA02	143	2558	2379	7/2/13	3/24/17	Scaffold	Max-Planck-Institute for Evolutionary Biology	SAMN02470517	GCA_000418025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/025/GCA_000418025.2_SCL19_v2	24435862	Scl19
Bacillus cereus	1396	PRJNA288461	288461	Terrabacteria group	Firmicutes	5.65919	35.1	-	MUAO01	215	6074	5736	3/3/17	3/6/17	Contig	Cornell University	SAMN06242079	GCA_002014895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/895/GCA_002014895.1_ASM201489v1	-	FSL R5-0811
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.02809	37.9	-	JOXA01	23	3085	2978	7/15/14	2/26/17	Contig	Cornell University	SAMN02741482	GCA_000726475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/475/GCA_000726475.1_ASM72647v1	-	FSL R8-5436
Yersinia pestis H1958004	755931	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.19543	48.1	-	ADSH01	1339	3998	3666	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403081	GCA_000324945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/945/GCA_000324945.1_ASM32494v1	23271803	H1958004
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.74441	30.4	-	CUKT01	17	1864	1773	3/31/15	3/18/17	Contig	SC	SAMEA1010548	GCA_001224865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/865/GCA_001224865.1_7038_3_84	-	OXC6334
Mycoplasma dispar	86660	PRJNA238452	238452	Terrabacteria group	Tenericutes	1.08445	29	chromosome:NZ_CP007229.1/CP007229.1	-	1	792	729	3/4/15	4/17/17	Complete Genome	University of Missouri - Columbia	SAMN03379857	GCA_000941075.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/075/GCA_000941075.1_ASM94107v1	-	ATCC 27140
Staphylococcus aureus M0350	1158523	PRJNA88955	88955	Terrabacteria group	Firmicutes	2.96313	33.2	-	AJCP01	5	3060	2884	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809175	GCA_000360885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/885/GCA_000360885.1_Stap_aure_M0350_V1	-	M0350
Staphylococcus aureus M0351	1158524	PRJNA88957	88957	Terrabacteria group	Firmicutes	2.88753	32.9	-	AJCQ01	9	3018	2853	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809176	GCA_000360905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/905/GCA_000360905.1_Stap_aure_M0351_V1	-	M0351
Clostridioides difficile 630	272563	PRJNA275406	275406	Terrabacteria group	Firmicutes	4.27478	29	chromosome:NZ_CP010905.2/CP010905.2	-	1	4023	3811	2/24/15	8/3/17	Complete Genome	Norddeutsches Zentrum für Mikrobielle Genomforschung	SAMN03344097	GCA_000932055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/932/055/GCA_000932055.2_ASM93205v2	25858846	630
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.73754	30.2	-	CULI01	31	1815	1673	3/31/15	3/18/17	Contig	SC	SAMEA1010421	GCA_001224905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/905/GCA_001224905.1_7065_7_10	-	OXC6356
Yersinia pestis H1959004	755879	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.47027	47.7	-	ADSI01	946	4227	3967	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403082	GCA_000324965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/965/GCA_000324965.1_ASM32496v1	23271803	H1959004
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.04624	37.9	-	JOXH01	22	3096	2996	7/15/14	2/26/17	Contig	Cornell University	SAMN02741490	GCA_000726505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/505/GCA_000726505.1_ASM72650v1	-	FSL R8-5584
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.47059	35.1	-	MQTA01	71	5920	5539	3/6/17	3/8/17	Contig	"OARSA, CFSAN"	SAMN05608062	GCA_002021335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/335/GCA_002021335.1_ASM202133v1	-	MOD1_Bc75
Staphylococcus epidermidis Scl25	1344992	PRJNA207994	207994	Terrabacteria group	Firmicutes	2.45876	31.9	-	ATDC02	139	2380	2278	7/2/13	3/24/17	Scaffold	Max-Planck-Institute for Evolutionary Biology	SAMN02470524	GCA_000418065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/065/GCA_000418065.2_SCL25_v2	24435862	Scl25
Mycobacterium tuberculosis MD18116	1447464	PRJNA234577	234577	Terrabacteria group	Actinobacteria	4.32863	65.4	-	JLFP01	112	4323	4110	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584615	GCA_000650275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/275/GCA_000650275.1_Myco_tube_MD18116_V1	-	MD18116
Mycoplasma flocculare ATCC 27399	743971	PRJNA46461	46461	Terrabacteria group	Tenericutes	0.778866	29	chromosome:NZ_CP007585.1/CP007585.1	-	1	639	581	1/6/15	4/10/17	Complete Genome	University of Missouri	SAMN02730214	GCA_000815065.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/815/065/GCA_000815065.1_ASM81506v1	25767245	Ms42
Streptococcus pneumoniae 1719	1415763	PRJNA225875	225875	Terrabacteria group	Firmicutes	2.15393	39.7	-	AYRL01	106	2308	2021	12/11/13	3/8/17	Contig	"Research Institute of Physical-Chemical Medicine, Moscow, Russia"	SAMN02470851	GCA_000506625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/625/GCA_000506625.1_Spn.str1719_v1.0	26563895	1719
Helicobacter pylori CPY1962	992016	PRJNA64059	64059	Proteobacteria	delta/epsilon subdivisions	1.56156	38.9	-	AKNL01	8	1565	1391	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00777159	GCA_000275185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/185/GCA_000275185.1_ASM27518v1	23661595	CPY1962
Neisseria meningitidis 97018	1145128	PRJNA83469	83469	Proteobacteria	Betaproteobacteria	2.15234	51.9	-	APSO01	137	2523	2115	5/1/13	3/21/17	Contig	IGS	SAMN01780078	GCA_000392355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/355/GCA_000392355.1_ASM39235v1	-	97018
Streptococcus pyogenes serotype M18	301451	PRJEB7108	279941	Terrabacteria group	Firmicutes	1.886	38.4	-	CDGX01	199	2007	1803	3/31/15	3/27/17	Contig	IZSLER	SAMEA2734419	GCA_001369215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/369/215/GCA_001369215.1_M18GASBO7	-	ME
Leptospira interrogans serovar Manilae str. M776_fur_mutant	1085545	PRJNA74181	74181	Spirochaetes	Spirochaetia	4.59898	35	-	AHPT01	282	4152	3763	2/3/12	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00739362	GCA_000246035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/035/GCA_000246035.2_CLC_glsol003	-	M776_fur_mutant
Pseudomonas aeruginosa BWH053	1418239	PRJNA227536	227536	Proteobacteria	Gammaproteobacteria	6.85505	66.2	-	JIEX01	13	6562	6344	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02402437	GCA_000629525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/525/GCA_000629525.1_Pseu_aeru_BWH053_V1	-	BWH053
Acinetobacter baumannii Naval-13	903904	PRJNA53407	53407	Proteobacteria	Gammaproteobacteria	4.10774	38.9	-	AMDR01	64	4034	3834	10/11/12	5/18/17	Contig	Walter Reed Army Institute of Research	SAMN00761220	GCA_000305295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/295/GCA_000305295.1_gacin16v1.0	-	Naval-13
Streptococcus agalactiae CCUG 49086	1105270	PRJNA86263	86263	Terrabacteria group	Firmicutes	2.07722	35.4	-	ANDQ01	32	2158	2029	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991088	GCA_000311645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/645/GCA_000311645.1_ASM31164v1	-	CCUG 49086
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.15611	41	-	CEIO01	174	2175	2030	2/18/15	3/17/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234020	GCA_000946135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/135/GCA_000946135.1_Velvet_assembly	-	S15X
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.38625	38.3	-	FJCO01	27	3071	2947	2/20/16	3/27/17	Contig	SC	SAMEA2060121	GCA_900057245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/245/GCA_900057245.1_10771_1_75	-	2531STDY5467356
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.6259	50.8	-	CXDX01	409	4969	4473	7/17/15	2/24/17	Scaffold	SC	SAMEA954747	GCA_001248625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/625/GCA_001248625.1_5236_8_8	-	Sh31382_441096
Burkholderia cenocepacia	95486	PRJNA327109	327109	Proteobacteria	Betaproteobacteria	4.28108	63.2	-	MAZC01	2606	3969	2622	9/6/16	9/6/16	Contig	Universidad del Desarrollo	SAMN05301538	GCA_001719305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/305/GCA_001719305.1_ASM171930v1	-	C141BCUC
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.42551	67.8	-	LWVL01	242	7706	7115	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208575	GCA_001976345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/345/GCA_001976345.1_ASM197634v1	-	3943a
Vibrio cholerae O1 biovar El Tor str. Ogawa RND6878	1416746	PRJNA226194	226194	Proteobacteria	Gammaproteobacteria	4.00098	47.5	-	AYNL01	178	3740	3627	12/2/13	3/24/17	Contig	Central Research Institute for Epidemiology	SAMN02469783	GCA_000500715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/715/GCA_000500715.1_RND6878_v1	25035324	Ogawa RND6878
Clostridioides difficile	1496	PRJDB4029	289860	Terrabacteria group	Firmicutes	4.03723	28.4	-	BBYD01	267	3693	3576	7/7/15	3/18/17	Contig	Rakuno Gakuen University	SAMD00034909	GCA_001263675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/675/GCA_001263675.1_ASM126367v1	-	KY65
Vibrio parahaemolyticus S002	1394552	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.06044	45.1	-	AWNE01	648	4947	4661	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338866	GCA_000492075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/075/GCA_000492075.1_S002	-	S002
Klebsiella pneumoniae CHS 05	1438711	PRJNA234174	234174	Proteobacteria	Gammaproteobacteria	5.91184	56.9	-	JMWK01	15	6009	5723	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581307	GCA_000693175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/175/GCA_000693175.1_Kleb_pneu_CHS_05_V1	-	CHS 05
Enterococcus faecalis EnGen0207	1157389	PRJNA88411	88411	Terrabacteria group	Firmicutes	3.33457	37.1	-	AIQW01	22	3514	3333	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808883	GCA_000396205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/205/GCA_000396205.1_Ente_faec_B2687_V1	-	B2687
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.06169	52.6	-	MBAU01	156	2411	2086	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04852975	GCA_001858855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/855/GCA_001858855.1_ASM185885v1	-	USO_NO10-026
Enterococcus faecium	1352	PRJNA261380	261380	Terrabacteria group	Firmicutes	2.59942	38.1	-	JUEJ01	126	2633	2448	12/18/14	3/25/17	Scaffold	University of Copenhagen	SAMN03072870	GCA_000804405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/405/GCA_000804405.1_ASM80440v1	-	70-40-11
Acholeplasma palmae J233	1318466	PRJEB1742	222673	Terrabacteria group	Tenericutes	1.55423	29	chromosome:NC_022538.1/FO681347.1	-	1	1502	1426	10/11/13	4/17/17	Complete Genome	MPIMG	SAMEA4532332	GCA_000968055.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/055/GCA_000968055.1_ASM96805v1	24158107	J233
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.20113	60	-	FCIR01	25	4915	4763	1/21/16	3/27/17	Scaffold	SC	SAMEA2273966	GCA_001539565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/565/GCA_001539565.1_12082_3_1	-	2880STDY5682893
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.58413	31.7	-	FBJV01	16	1599	1532	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683326	GCA_001488375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/375/GCA_001488375.1_H065160534	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.09938	55	-	FJWT01	51	5037	4797	4/5/16	3/28/17	Scaffold	SC	SAMEA2273305	GCA_900075235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/235/GCA_900075235.1_11983_7_81	-	e1195
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16356	64.2	-	FSCD01	24	5158	5018	12/14/16	3/21/17	Contig	SC	SAMEA2068955	GCA_900132675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/675/GCA_900132675.1_10250_1_17	-	357
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.50614	67.2	-	LPGE01	193	6807	6351	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449504	GCA_001536805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/805/GCA_001536805.1_ASM153680v1	-	MSMB1530WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.87301	55.5	-	LVUZ01	65	4793	4602	4/25/16	3/28/17	Contig	JCVI	SAMN04572701	GCA_001631485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/485/GCA_001631485.1_ASM163148v1	-	GN06223
Pseudomonas sp. R32(2017)	1981690	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.41166	60.6	-	NEHT01	30	5880	5737	4/27/17	5/3/17	Contig	University of Sao Paulo	SAMN06771384	GCA_002112485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/485/GCA_002112485.1_ASM211248v1	-	R32(2017)
Streptomyces sp. IGB124	1519485	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.43158	72.3	-	LGDH01	258	7659	7258	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900636	GCA_001279935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/935/GCA_001279935.1_ASM127993v1	-	IGB124
Streptomyces sp. MMG1064	1519488	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.1281	72.5	-	LGDT01	216	7341	6979	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900639	GCA_001279965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/965/GCA_001279965.1_ASM127996v1	-	MMG1064
Pseudomonas sp. R22(2017)	1981699	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.41245	60.6	-	NEIC01	23	5876	5735	4/27/17	5/3/17	Contig	University of Sao Paulo	SAMN06771375	GCA_002112605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/605/GCA_002112605.1_ASM211260v1	-	R22(2017)
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.82898	55.4	-	LVUJ01	182	4814	4455	4/25/16	3/28/17	Contig	JCVI	SAMN04572686	GCA_001631505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/505/GCA_001631505.1_ASM163150v1	-	GN05643
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.36908	67.4	-	LPGJ01	151	6720	6357	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449509	GCA_001536865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/865/GCA_001536865.1_ASM153686v1	-	MSMB1562WGS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23884	64.1	-	FVFS01	30	5257	5105	3/10/17	3/18/17	Contig	SC	SAMEA2071450	GCA_900132685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/685/GCA_900132685.1_10250_1_18	-	358
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.0554	55.1	-	FJWL01	55	4989	4767	4/5/16	3/28/17	Scaffold	SC	SAMEA2273282	GCA_900075245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/245/GCA_900075245.1_11983_7_58	-	e1032
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.7098	31.2	-	FBLO01	55	1747	1627	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683366	GCA_001488415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/415/GCA_001488415.1_SWAN393	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.36787	59.7	-	FCHP01	21	5079	4926	1/21/16	3/27/17	Scaffold	SC	SAMEA2273936	GCA_001539585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/585/GCA_001539585.1_12082_2_69	-	2880STDY5682863
Methanobrevibacter sp. AbM4	224719	PRJNA157813	157813	Euryarchaeota	Methanobacteria	1.99819	29	chromosome:NC_021355.1/CP004050.1	-	1	1737	1675	6/3/13	4/17/17	Complete Genome	AgResearch Ltd. & The New Zealand Agricultural Greenhouse Gas Research Centre	SAMN02602974	GCA_000404165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/404/165/GCA_000404165.1_ASM40416v1	-	AbM4
Enterococcus faecium	1352	PRJNA261384	261384	Terrabacteria group	Firmicutes	2.49109	38.1	-	JUEL01	74	2544	2345	12/18/14	3/25/17	Scaffold	University of Copenhagen	SAMN03072880	GCA_000804415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/415/GCA_000804415.1_70-8-2	-	70-8-2
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.10097	52.4	-	MBAV01	230	2419	2120	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04852976	GCA_001858865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/865/GCA_001858865.1_ASM185886v1	-	USO_PL10-1
Enterococcus faecalis EnGen0205	1157390	PRJNA88413	88413	Terrabacteria group	Firmicutes	3.29416	37.1	-	AIQX01	35	3504	3318	5/3/13	3/24/17	Scaffold	Broad Institute	SAMN00808884	GCA_000396225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/225/GCA_000396225.1_Ente_faec_B2802_V1	-	B2802
Klebsiella pneumoniae CHS 06	1438712	PRJNA234175	234175	Proteobacteria	Gammaproteobacteria	5.95779	56.9	-	JMWL01	10	6011	5724	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581308	GCA_000693195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/195/GCA_000693195.1_Kleb_pneu_CHS_06_V1	-	CHS 06
Vibrio parahaemolyticus S001	1394551	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.03072	45.4	-	AWNF01	496	4830	4553	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338865	GCA_000492095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/095/GCA_000492095.1_S001	-	S001
Clostridioides difficile	1496	PRJDB4029	289860	Terrabacteria group	Firmicutes	3.99638	28.4	-	BBYE01	270	3648	3534	7/7/15	3/18/17	Contig	Rakuno Gakuen University	SAMD00034910	GCA_001263695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/695/GCA_001263695.1_ASM126369v1	-	RU-17
Vibrio cholerae O1 biovar El Tor str. Inaba RND18826	1416749	PRJNA227064	227064	Proteobacteria	Gammaproteobacteria	4.03614	47.5	-	AYOM01	246	3802	3686	12/2/13	3/24/17	Contig	Central Research Institute for Epidemiology	SAMN02469781	GCA_000500735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/735/GCA_000500735.1_RND18826_v2	-	Inaba RND18826
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.01777	68.2	-	LWUX01	261	7279	6718	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208561	GCA_001976385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/385/GCA_001976385.1_ASM197638v1	-	2002721786
Burkholderia cenocepacia	95486	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	7.85156	66.8	-	JUSV01	2559	-	-	7/10/15	7/13/16	Scaffold	University of Washington	SAMN03198001	GCA_001058445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/445/GCA_001058445.1_ASM105844v1	26230489	79_BCEN
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.40903	50.7	-	CWUO01	369	5096	4103	7/16/15	2/24/17	Scaffold	SC	SAMEA3345038	GCA_001248665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/665/GCA_001248665.1_H14148037701	-	37701ss_1
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.48218	38.4	-	FJEI01	20	3191	3052	2/20/16	3/27/17	Contig	SC	SAMEA2065722	GCA_900057255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/255/GCA_900057255.1_10396_8_30	-	2531STDY5467440
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03051	41.2	-	CEJF01	67	2025	1921	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233975	GCA_000946155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/155/GCA_000946155.1_Velvet_assembly	-	S10E
Streptococcus agalactiae BSU454	1105278	PRJNA86293	86293	Terrabacteria group	Firmicutes	2.0947	35.4	-	ANDY01	28	2149	2041	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991120	GCA_000311665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/665/GCA_000311665.1_ASM31166v1	-	BSU454
Acinetobacter baumannii Naval-83	903909	PRJNA53417	53417	Proteobacteria	Gammaproteobacteria	4.1066	39	-	AMFK01	103	4062	3802	10/11/12	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00761238	GCA_000305315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/315/GCA_000305315.1_gacin21v1.0	-	Naval-83
Pseudomonas aeruginosa BWH052	1418238	PRJNA227535	227535	Proteobacteria	Gammaproteobacteria	6.83079	66.1	-	JIEY01	9	6536	6346	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02402436	GCA_000629545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/545/GCA_000629545.1_Pseu_aeru_BWH052_V1	-	BWH052
Leptospira interrogans serovar Manilae str. M874_LA0615_mutant	1085546	PRJNA74183	74183	Spirochaetes	Spirochaetia	4.6028	35	-	AHPU01	309	4147	3760	2/3/12	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00739363	GCA_000246055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/055/GCA_000246055.2_CLC_glsol004	-	M874_LA0615_mutant
Streptococcus pyogenes serotype M18	301451	PRJEB7108	279941	Terrabacteria group	Firmicutes	1.86874	38.4	-	CDGW01	183	1988	1769	3/31/15	3/27/17	Contig	IZSLER	SAMEA2734420	GCA_001369235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/369/235/GCA_001369235.1_M18GASBO8	-	PA
Neisseria meningitidis 2003022	1145139	PRJNA83491	83491	Proteobacteria	Betaproteobacteria	2.14465	51.9	-	APSZ01	131	2479	2124	5/1/13	3/21/17	Contig	IGS	SAMN01780089	GCA_000392695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/695/GCA_000392695.2_ASM39269v2	-	2003022
Helicobacter pylori CPY1313	992014	PRJNA64055	64055	Proteobacteria	delta/epsilon subdivisions	1.58144	38.8	-	AKNK01	5	1586	1394	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00777156	GCA_000275205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/205/GCA_000275205.1_ASM27520v1	23661595	CPY1313
Streptococcus pneumoniae 27	1415764	PRJNA225877	225877	Terrabacteria group	Firmicutes	2.19177	39.6	-	AYRM01	122	2368	2043	12/11/13	3/8/17	Contig	"Research Institute of Physical-Chemical Medicine, Moscow, Russia"	SAMN02470850	GCA_000506645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/645/GCA_000506645.1_Spn.str27_v1.0	26563895	27
Rickettsia prowazekii str. NMRC Madrid E	1290427	PRJNA188523	188523	Proteobacteria	Alphaproteobacteria	1.11152	29	chromosome:NC_020992.1/CP004888.1	-	1	925	830	4/11/13	3/31/17	Complete Genome	Naval Medical Research Center	SAMN01983875	GCA_000363905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/905/GCA_000363905.1_ASM36390v1	23814035	NMRC Madrid E
Mycobacterium tuberculosis MD18090	1447465	PRJNA234578	234578	Terrabacteria group	Actinobacteria	4.42232	65.6	-	JLFO01	97	4347	4139	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584616	GCA_000650295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/295/GCA_000650295.1_Myco_tube_MD18090_V1	-	MD18090
Staphylococcus epidermidis Scl31	1344991	PRJNA207995	207995	Terrabacteria group	Firmicutes	2.53334	31.9	-	ATDD02	401	2504	2321	7/2/13	3/24/17	Scaffold	Max-Planck-Institute for Evolutionary Biology	SAMN02470525	GCA_000418085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/085/GCA_000418085.2_SCL31_v2	-	Scl31
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.1153	35.3	-	MQTB01	72	5571	5228	3/6/17	3/8/17	Contig	"OARSA, CFSAN"	SAMN05608044	GCA_002021365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/365/GCA_002021365.1_ASM202136v1	-	MOD1_Bc20
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09769	37.7	-	JOWV01	28	3203	3098	7/15/14	2/26/17	Contig	Cornell University	SAMN02741476	GCA_000726525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/525/GCA_000726525.1_ASM72652v1	-	FSL R8-5249
Yersinia pestis I160001	755958	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.39934	47.6	-	ADSJ01	1222	4278	3903	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403083	GCA_000324985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/985/GCA_000324985.1_ASM32498v1	23271803	I160001
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.663	30.4	-	CUUL01	16	1751	1658	3/31/15	3/18/17	Contig	SC	SAMEA1400913	GCA_001224965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/965/GCA_001224965.1_7213_3_55	-	OXC6598
Rickettsia prowazekii str. Breinl	1290428	PRJNA188530	188530	Proteobacteria	Alphaproteobacteria	1.1093	29	chromosome:NC_020993.1/CP004889.1	-	1	921	852	4/11/13	4/1/17	Complete Genome	Naval Medical Research Center	SAMN01983876	GCA_000367405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/405/GCA_000367405.1_ASM36740v1	23814035	Breinl
Staphylococcus aureus M0363	1158525	PRJNA88959	88959	Terrabacteria group	Firmicutes	2.87958	32.9	-	AJCR01	3	3012	2842	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809178	GCA_000360925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/925/GCA_000360925.1_Stap_aure_M0363_V1	-	M0363
Staphylococcus aureus M0364	1157026	PRJNA88609	88609	Terrabacteria group	Firmicutes	2.86513	32.8	-	AIWM01	7	3005	2844	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792152	GCA_000360945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/945/GCA_000360945.1_Stap_aure_M0364_V1	-	M0364
Rickettsia prowazekii str. Chernikova	1105094	PRJNA74999	74999	Proteobacteria	Alphaproteobacteria	1.1098	29	chromosome:NC_017049.1/CP003391.1	-	1	920	871	3/21/12	3/30/17	Complete Genome	Los Alamos National Laboratory	SAMN02603542	GCA_000277165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/165/GCA_000277165.1_ASM27716v1	-	Chernikova
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.72968	30.3	-	CUTY01	17	1828	1706	3/31/15	3/18/17	Contig	SC	SAMEA1401621	GCA_001224985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/985/GCA_001224985.1_7213_3_40	-	OXC6583
Yersinia pestis I1969003	755914	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.51212	47.6	-	ADSK01	1213	4408	3977	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403084	GCA_000325005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/005/GCA_000325005.1_ASM32500v1	23271803	I1969003
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09172	37.7	-	JOWU01	55	3196	3089	7/15/14	2/26/17	Contig	Cornell University	SAMN02741475	GCA_000726545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/545/GCA_000726545.1_ASM72654v1	-	FSL R8-5237
Bacillus cereus	1396	PRJNA359364	359364	Terrabacteria group	Firmicutes	5.39239	35.1	-	MTAT01	29	5770	5493	3/9/17	3/11/17	Contig	University of Alberta	SAMN06190354	GCA_002024535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/535/GCA_002024535.1_ASM202453v1	-	E41
Staphylococcus epidermidis CIM28	1344989	PRJNA207997	207997	Terrabacteria group	Firmicutes	2.68909	32	-	ATDF02	91	2669	2491	7/2/13	3/24/17	Scaffold	Max-Planck-Institute for Evolutionary Biology	SAMN02470523	GCA_000418125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/125/GCA_000418125.2_CIM28_v2	24435862	CIM28
Mycobacterium tuberculosis MD18314	1447466	PRJNA234579	234579	Terrabacteria group	Actinobacteria	4.39153	65.6	-	JLFN01	94	4332	4116	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584617	GCA_000650315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/315/GCA_000650315.1_Myco_tube_MD18314_V1	-	MD18314
Rickettsia prowazekii str. Katsinyian	1105095	PRJNA75001	75001	Proteobacteria	Alphaproteobacteria	1.11145	29	chromosome:NC_017050.1/CP003392.1	-	1	920	868	3/21/12	3/30/17	Complete Genome	Los Alamos National Laboratory	SAMN02603543	GCA_000277185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/185/GCA_000277185.1_ASM27718v1	-	Katsinyian
Streptococcus pneumoniae	1313	PRJNA243511	243511	Terrabacteria group	Firmicutes	2.09253	39.6	-	JJMK01	83	2284	2058	5/8/14	3/9/17	Contig	Cornell University	SAMN02716923	GCA_000685585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/585/GCA_000685585.1_ASVL_JC_0001v1	25125651	ASVL_JC_0001
Helicobacter pylori CPY1124	992013	PRJNA64053	64053	Proteobacteria	delta/epsilon subdivisions	1.5602	38.9	-	AKNJ01	12	1579	1405	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00777116	GCA_000275225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/225/GCA_000275225.2_ASM27522v2	23661595	CPY1124
Neisseria meningitidis NM1482	1145155	PRJNA83523	83523	Proteobacteria	Betaproteobacteria	2.15251	51.8	-	APTP01	140	2485	2115	5/1/13	3/21/17	Contig	IGS	SAMN01780105	GCA_000392715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/715/GCA_000392715.2_ASM39271v2	-	NM1482
Streptococcus pyogenes serotype M18	301451	PRJEB7108	279941	Terrabacteria group	Firmicutes	1.83711	38.4	-	CDGY01	207	1950	1740	3/31/15	3/27/17	Contig	IZSLER	SAMEA2734421	GCA_001369255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/369/255/GCA_001369255.1_M18GASBO9	-	RO
Leptospira interrogans serovar Manilae str. M1352_LPS_mutant	1085544	PRJNA74185	74185	Spirochaetes	Spirochaetia	4.59734	35	-	AHPV01	283	4156	3763	2/3/12	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00739397	GCA_000246075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/075/GCA_000246075.2_CLC_glsol005	-	M1352_LPS_mutant
Pseudomonas aeruginosa BWH051	1418237	PRJNA227534	227534	Proteobacteria	Gammaproteobacteria	6.73403	66.1	-	JIEZ01	13	6438	6263	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02402435	GCA_000629565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/565/GCA_000629565.1_Pseu_aeru_BWH051_V1	-	BWH051
Acinetobacter baumannii OIFC0162	903907	PRJNA53413	53413	Proteobacteria	Gammaproteobacteria	4.0784	38.8	-	AMFH01	55	3906	3727	10/9/12	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00761223	GCA_000307895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/895/GCA_000307895.1_gacin19v1.0	-	OIFC0162
Streptococcus agalactiae BSU248	1105279	PRJNA86297	86297	Terrabacteria group	Firmicutes	2.10712	35.1	-	ANDZ01	21	2173	2068	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991117	GCA_000311685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/685/GCA_000311685.1_SAG95_v1	-	BSU248
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03564	41.3	-	CEDI01	59	2031	1918	2/14/15	3/17/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233889	GCA_000946175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/175/GCA_000946175.1_Velvet_assembly	-	type strain: LS0
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.5399	38.3	-	FJKR01	61	3235	3086	2/20/16	3/27/17	Contig	SC	SAMEA2080694	GCA_900057265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/265/GCA_900057265.1_10625_3_23	-	2532STDY5467592
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.74775	50.8	-	CXKH01	392	5352	4563	7/16/15	2/24/17	Scaffold	SC	SAMEA2003903	GCA_001248685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/685/GCA_001248685.1_8290_4_4	-	93522
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.09961	68.2	-	LWUS01	257	7426	6860	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208556	GCA_001976395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/395/GCA_001976395.1_ASM197639v1	-	2002721741
Vibrio cholerae O1 biovar El Tor str. L-3226	1458274	PRJNA237111	237111	Proteobacteria	Gammaproteobacteria	3.99105	47.5	-	JDVX01	123	3764	3288	3/25/14	8/8/17	Contig	RARI	SAMN02630793	GCA_000600255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/255/GCA_000600255.1_Vibrio_cholerae_O1_biovar_El_Tor_str._L-3226	24874670	L-3226
Clostridioides difficile CD26A54_R	1222030	PRJNA172829	172829	Terrabacteria group	Firmicutes	4.14628	28.7	-	AMDM01	4	3827	3645	1/5/16	3/19/17	Contig	Public Health Agency of Canada	SAMN03020581	GCA_001484885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/885/GCA_001484885.1_CD26a54Rv1.0	23349739	CD26A54_R
Vibrio parahaemolyticus S096	1394635	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.17205	45.1	-	AWJZ01	655	5083	4697	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338949	GCA_000493225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/225/GCA_000493225.1_S096	-	S096
Klebsiella pneumoniae CHS 07	1438713	PRJNA234176	234176	Proteobacteria	Gammaproteobacteria	5.90103	56.9	-	JMWM01	6	5966	5695	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581309	GCA_000693215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/215/GCA_000693215.1_Kleb_pneu_CHS_07_V1	-	CHS 07
Enterococcus faecalis EnGen0228	1157391	PRJNA88415	88415	Terrabacteria group	Firmicutes	3.27309	37.1	-	AIQY01	34	3441	3287	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808885	GCA_000396245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/245/GCA_000396245.1_Ente_faec_B2813_V1	-	B2813
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.1269	52.4	-	MBAW01	162	2464	2149	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04852977	GCA_001858905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/905/GCA_001858905.1_ASM185890v1	-	USO_PL10-2
Enterococcus faecium	1352	PRJNA274599	274599	Terrabacteria group	Firmicutes	3.25481	37.6	-	JXZA01	44	3379	3161	2/25/15	3/25/17	Scaffold	"Beijing Chao-Yang Hospital, Capital Medical University"	SAMN03329581	GCA_000934365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/365/GCA_000934365.1_ASM93436v1	-	E161
Rickettsia prowazekii str. BuV67-CWPP	1105096	PRJNA75003	75003	Proteobacteria	Alphaproteobacteria	1.11145	29	chromosome:NC_017056.1/CP003393.1	-	1	919	867	3/21/12	3/30/17	Complete Genome	Los Alamos National Laboratory	SAMN02603544	GCA_000277205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/205/GCA_000277205.1_ASM27720v1	-	BuV67-CWPP
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.18177	60	-	FCLJ01	14	4955	4798	1/21/16	3/27/17	Scaffold	SC	SAMEA2274056	GCA_001539605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/605/GCA_001539605.1_12082_3_80	-	2880STDY5682984
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66031	31.4	-	FBFA01	15	1713	1627	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683192	GCA_001488455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/455/GCA_001488455.1_EC4835	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.82977	55.5	-	FJWH01	61	4769	4520	4/5/16	3/28/17	Scaffold	SC	SAMEA2273297	GCA_900075255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/255/GCA_900075255.1_11983_7_73	-	e1154
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.9318	64.3	-	FVFT01	70	4900	4695	3/10/17	3/18/17	Contig	SC	SAMEA2070771	GCA_900132695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/695/GCA_900132695.1_10250_1_16	-	356
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.04001	67.4	-	LPNE01	83	6371	6034	1/21/16	6/28/17	Contig	Northern Arizona University	SAMN03449692	GCA_001536885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/536/885/GCA_001536885.1_ASM153688v1	-	MSMB2028WGS
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.706	55.5	-	LVUQ01	52	4579	4354	4/25/16	3/28/17	Contig	JCVI	SAMN04572692	GCA_001631615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/615/GCA_001631615.1_ASM163161v1	-	GN05811
Pseudomonas sp. B39(2017)	1981718	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.39855	60.7	-	NEIV01	31	5812	5673	4/27/17	5/3/17	Contig	University of Sao Paulo	SAMN06771356	GCA_002112835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/835/GCA_002112835.1_ASM211283v1	-	B39(2017)
Streptomyces sp. AS58	1519489	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.5769	70.9	-	LGDU01	425	9225	8608	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900640	GCA_001279985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/279/985/GCA_001279985.1_ASM127998v1	-	AS58
Streptomyces sp. NRRL WC-3618	1519490	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.33846	70.1	-	LGDW01	500	8230	7538	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900642	GCA_001280005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/005/GCA_001280005.1_ASM128000v1	-	NRRL WC-3618
Pseudomonas sp. B37(2017)	1981720	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.39844	60.7	-	NEIX01	28	5808	5668	4/27/17	5/3/17	Contig	University of Sao Paulo	SAMN06771354	GCA_002112885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/885/GCA_002112885.1_ASM211288v1	-	B37(2017)
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.94373	55.4	-	LVTU01	174	4927	4554	4/25/16	3/28/17	Contig	JCVI	SAMN04572593	GCA_001631685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/685/GCA_001631685.1_ASM163168v1	-	GN04892
Burkholderia ubonensis	101571	PRJNA279182	279182	Proteobacteria	Betaproteobacteria	7.19698	67.4	-	LPFP01	100	6501	6136	1/22/16	6/28/17	Contig	Northern Arizona University	SAMN03449489	GCA_001539165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/165/GCA_001539165.1_ASM153916v1	-	MSMB1490WGS
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.90593	64.2	-	FVFQ01	17	4900	4787	3/10/17	3/18/17	Contig	SC	SAMEA1964383	GCA_900132705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/705/GCA_900132705.1_10250_1_19	-	359
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.79531	55.5	-	FJXE01	40	4700	4464	4/5/16	3/28/17	Scaffold	SC	SAMEA2273212	GCA_900075265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/265/GCA_900075265.1_12045_4_83	-	e1101
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66071	31.4	-	FAXY01	36	1721	1628	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683007	GCA_001488475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/475/GCA_001488475.1_H112160325	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.33164	59.7	-	FCJW01	29	5170	5002	1/21/16	3/27/17	Scaffold	SC	SAMEA2274015	GCA_001539625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/625/GCA_001539625.1_12082_3_44	-	2880STDY5682943
Rickettsia prowazekii str. GvV257	1105098	PRJNA75007	75007	Proteobacteria	Alphaproteobacteria	1.11197	29	chromosome:NC_017048.1/CP003395.1	-	1	919	851	3/21/12	3/30/17	Complete Genome	Los Alamos National Laboratory	SAMN02603546	GCA_000277245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/245/GCA_000277245.1_ASM27724v1	-	GvV257
Enterococcus faecium	1352	PRJNA274600	274600	Terrabacteria group	Firmicutes	3.04847	37.6	-	JYCO01	5	3176	2967	3/12/15	3/25/17	Scaffold	"Beijing Chao-Yang Hospital, Capital Medical University"	SAMN03329590	GCA_000951815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/951/815/GCA_000951815.1_ASM95181v1	-	E31
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.13597	52.4	-	MBAX01	199	2484	2166	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04852978	GCA_001858925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/925/GCA_001858925.1_ASM185892v1	-	USO_PL10-7
Enterococcus faecalis EnGen0206	1157392	PRJNA88417	88417	Terrabacteria group	Firmicutes	3.27998	37.1	-	AIQZ01	40	3460	3287	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808886	GCA_000396265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/265/GCA_000396265.1_Ente_faec_B2864_V1	-	B2864
Klebsiella pneumoniae CHS 09	1438715	PRJNA234178	234178	Proteobacteria	Gammaproteobacteria	5.88476	56.9	-	JMWN01	10	6163	5890	5/19/14	12/10/16	Scaffold	Broad Institute	SAMN02581311	GCA_000693235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/235/GCA_000693235.1_Kleb_pneu_CHS_09_V1	-	CHS 09
Vibrio parahaemolyticus S092	1394631	PRJNA215961	215961	Proteobacteria	Gammaproteobacteria	5.16435	45.1	-	AWKD01	463	4955	4722	9/6/13	3/24/17	Contig	"State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology"	SAMN02338945	GCA_000493715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/715/GCA_000493715.1_S092	-	S092
Clostridioides difficile CD26A54_S	1222029	PRJNA172828	172828	Terrabacteria group	Firmicutes	4.16673	28.7	-	AMDL01	6	3847	3671	1/5/16	3/19/17	Contig	Public Health Agency of Canada	SAMN03020580	GCA_001484895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/895/GCA_001484895.1_CD26A54SV1.0	23349739	CD26A54_S
Vibrio cholerae 2012EL-1759	1343738	PRJNA207363	207363	Proteobacteria	Gammaproteobacteria	3.98295	47.5	-	JNEW01	68	3889	3660	6/18/14	3/24/17	Contig	CDC	SAMN02195196	GCA_000710155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/155/GCA_000710155.1_ASM71015v1	-	2012EL-1759
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.16788	68.1	-	LWUP01	224	7486	6943	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208553	GCA_001976405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/405/GCA_001976405.1_ASM197640v1	-	2002721785
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.69726	50.7	-	CXKK01	408	5285	4509	7/16/15	2/24/17	Scaffold	SC	SAMEA2003915	GCA_001248705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/705/GCA_001248705.1_8290_4_40	-	99442
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54307	38.3	-	FJMP01	36	3247	3115	2/20/16	3/27/17	Contig	SC	SAMEA2078031	GCA_900057275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/275/GCA_900057275.1_10625_3_76	-	2532STDY5467645
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.12347	41.1	-	CEHS01	123	2144	2015	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233965	GCA_000946195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/195/GCA_000946195.1_Velvet_assembly	-	LSH
Streptococcus agalactiae BSU253	1105281	PRJNA86303	86303	Terrabacteria group	Firmicutes	1.92443	35.2	-	ANEB01	21	1960	1851	11/7/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991114	GCA_000311705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/705/GCA_000311705.1_ASM31170v1	-	BSU253
Acinetobacter baumannii AB_2008-23-07-01-7	1221262	PRJNA172673	172673	Proteobacteria	Gammaproteobacteria	3.99502	39	-	AMHR01	242	3908	3665	10/2/12	3/15/17	Contig	Translational Genomics Research Institute	SAMN02471261	GCA_000308995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/995/GCA_000308995.1_ASM30899v1	-	AB_2008-23-07-01-7
Pseudomonas aeruginosa BWH050	1418236	PRJNA227533	227533	Proteobacteria	Gammaproteobacteria	6.56682	66.3	-	JIFA01	9	6250	6090	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02402434	GCA_000629585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/585/GCA_000629585.1_Pseu_aeru_BWH050_V1	-	BWH050
Leptospira interrogans serovar Pyrogenes str. 2006006956	1049926	PRJNA74187	74187	Spirochaetes	Spirochaetia	4.77279	34.9	-	AHPW01	344	4292	3901	2/3/12	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00739364	GCA_000246095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/095/GCA_000246095.2_CLC_glsol031	-	2006006956
Streptococcus pyogenes serotype M18	301451	PRJEB7108	279941	Terrabacteria group	Firmicutes	1.82992	38.4	-	CDGO01	182	1930	1754	3/31/15	3/27/17	Contig	IZSLER	SAMEA2734422	GCA_001369275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/369/275/GCA_001369275.1_M18GASBO665	-	18
Neisseria meningitidis NM27	1145191	PRJNA83595	83595	Proteobacteria	Betaproteobacteria	2.18716	51.8	-	APUZ01	151	2517	2101	5/1/13	3/21/17	Contig	IGS	SAMN01780158	GCA_000392735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/735/GCA_000392735.2_ASM39273v2	-	NM27
Helicobacter pylori Hp H-16	992038	PRJNA64103	64103	Proteobacteria	delta/epsilon subdivisions	1.70396	39	-	AKOF01	8	1666	1503	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778852	GCA_000275245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/245/GCA_000275245.2_ASM27524v2	23661595	Hp H-16
Streptococcus pneumoniae DAR831	1272951	PRJNA183969	183969	Terrabacteria group	Firmicutes	2.01897	39.6	-	AWTW01	52	2205	1988	4/22/14	3/8/17	Contig	University of Mississippi medical center	SAMN02729401	GCA_000688895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/895/GCA_000688895.1_DAR831	-	DAR831
Rickettsia prowazekii str. RpGvF24	1105099	PRJNA75009	75009	Proteobacteria	Alphaproteobacteria	1.1121	29	chromosome:NC_017057.1/CP003396.1	-	1	920	861	3/21/12	3/30/17	Complete Genome	Los Alamos National Laboratory	SAMN02603547	GCA_000277265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/265/GCA_000277265.1_ASM27726v1	-	RpGvF24
Mycobacterium tuberculosis MD16261	1447467	PRJNA234580	234580	Terrabacteria group	Actinobacteria	4.39954	65.6	-	JLFM01	74	4316	4122	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584618	GCA_000650335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/335/GCA_000650335.1_Myco_tube_MD16261_V1	-	MD16261
Staphylococcus epidermidis WI05	1344988	PRJNA207998	207998	Terrabacteria group	Firmicutes	2.60045	31.9	-	ATDG02	114	2597	2399	7/2/13	3/24/17	Scaffold	Max-Planck-Institute for Evolutionary Biology	SAMN02470528	GCA_000418145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/145/GCA_000418145.2_WI05_v2	24435862	WI05
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.86207	34.8	-	NBNG01	169	6165	5743	4/3/17	4/5/17	Contig	"OARSA, CFSAN"	SAMN05901949	GCA_002078195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/195/GCA_002078195.1_ASM207819v1	-	MOD1_Bc143
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09747	37.7	-	JOWW01	25	3202	3096	7/15/14	2/26/17	Contig	Cornell University	SAMN02741478	GCA_000726555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/555/GCA_000726555.1_ASM72655v1	-	FSL R8-5309
Yersinia pestis I1970005	755952	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.42984	47.9	-	ADSL01	1199	4229	3909	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403085	GCA_000325025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/025/GCA_000325025.1_ASM32502v1	23271803	I1970005
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.72379	30.3	-	CUQR01	15	1830	1709	3/31/15	3/18/17	Contig	SC	SAMEA1010301	GCA_001225005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/005/GCA_001225005.1_7092_1_50	-	OXC6497
Rickettsia prowazekii str. Rp22	449216	PRJNA19813	19813	Proteobacteria	Alphaproteobacteria	1.11161	29	chromosome:NC_017560.1/CP001584.1	-	1	920	869	3/30/10	3/29/17	Complete Genome	"Unite des Rickettsies, CNRS, Marseille"	SAMN02604077	GCA_000022785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/785/GCA_000022785.1_ASM2278v1	20368341	Rp22
Staphylococcus aureus M0367	1158526	PRJNA88961	88961	Terrabacteria group	Firmicutes	2.90987	32.9	-	AJCS01	4	3070	2905	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809179	GCA_000360965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/965/GCA_000360965.1_Stap_aure_M0367_V1	-	M0367
Staphylococcus aureus M0374	1158527	PRJNA88963	88963	Terrabacteria group	Firmicutes	2.88462	33	-	AJCT01	4	3006	2847	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809180	GCA_000360985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/360/985/GCA_000360985.1_Stap_aure_M0374_V1	-	M0374
Ehrlichia canis str. Jake	269484	PRJNA10694	10694	Proteobacteria	Alphaproteobacteria	1.31503	29	chromosome:NC_007354.1/CP000107.1	-	1	985	933	8/12/05	4/6/17	Complete Genome	DOE Joint Genome Institute	SAMN02598261	GCA_000012565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/565/GCA_000012565.1_ASM1256v1	-	Jake
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.63597	30.4	-	CUVO01	17	1706	1606	3/31/15	3/18/17	Contig	SC	SAMEA1400828	GCA_001225025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/025/GCA_001225025.1_7213_3_83	-	OXC6628
Yersinia pestis I1991001	755858	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.3358	48	-	ADSM01	1191	4110	3780	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403086	GCA_000325045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/045/GCA_000325045.1_ASM32504v1	23271803	I1991001
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09424	37.9	-	JOWX01	29	3134	3046	7/15/14	2/26/17	Contig	Cornell University	SAMN02741479	GCA_000726585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/585/GCA_000726585.1_ASM72658v1	-	FSL R8-5318
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.19382	35.3	-	NHUS01	46	5609	5299	6/19/17	6/22/17	Contig	"OARSA, CFSAN"	SAMN07163275	GCA_002199205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/205/GCA_002199205.1_ASM219920v1	-	MOD1_Bc188
Staphylococcus epidermidis WI09	1344987	PRJNA207999	207999	Terrabacteria group	Firmicutes	2.76281	32	-	ATDH02	95	2743	2554	7/2/13	3/24/17	Scaffold	Max-Planck-Institute for Evolutionary Biology	SAMN02470519	GCA_000418165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/165/GCA_000418165.2_WI09_v2	24435862	WI09
Mycobacterium tuberculosis MD16732	1447468	PRJNA234581	234581	Terrabacteria group	Actinobacteria	4.39114	65.6	-	JLFL01	97	4332	4114	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584619	GCA_000650355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/355/GCA_000650355.1_Myco_tube_MD16732_V1	-	MD16732
Rickettsia prowazekii str. Madrid E	272947	PRJNA43	43	Proteobacteria	Alphaproteobacteria	1.11152	29	chromosome:NC_000963.1/AJ235269.1	-	1	889	843	9/10/01	8/28/16	Complete Genome	Uppsala Univ.	SAMEA3138318	GCA_000195735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/735/GCA_000195735.1_ASM19573v1	9823893	Madrid E
Streptococcus pneumoniae DAR3264	1272954	PRJNA183970	183970	Terrabacteria group	Firmicutes	2.09601	39.5	-	AWTX01	55	2309	2065	4/22/14	3/8/17	Contig	University of Mississippi medical center	SAMN02729402	GCA_000689155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/155/GCA_000689155.1_DAR3264	-	DAR3264
Helicobacter pylori Hp A-17	992036	PRJNA64099	64099	Proteobacteria	delta/epsilon subdivisions	1.63662	39.2	-	AKOD01	5	1618	1443	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778857	GCA_000275265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/265/GCA_000275265.2_ASM27526v2	23661595	Hp A-17
Neisseria meningitidis 2001068	1145173	PRJNA83559	83559	Proteobacteria	Betaproteobacteria	2.2092	51.9	-	APUH01	135	2579	2209	6/21/13	3/21/17	Contig	IGS	SAMN01780123	GCA_000413175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/175/GCA_000413175.2_ASM41317v2	-	2001068
Streptococcus pyogenes serotype M18	301451	PRJEB7108	279941	Terrabacteria group	Firmicutes	1.86608	38.4	-	CDGV01	182	1978	1801	3/31/15	3/27/17	Contig	IZSLER	SAMEA2734423	GCA_001369295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/369/295/GCA_001369295.1_M18GASBO1065	-	18bis
Leptospira interrogans serovar Bataviae str. 2006006976	1049802	PRJNA74189	74189	Spirochaetes	Spirochaetia	4.70883	35	-	AHPX01	314	4279	3868	2/3/12	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00739365	GCA_000246115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/115/GCA_000246115.2_CLC_glsol033	-	2006006976
Pseudomonas aeruginosa BWH049	1418235	PRJNA227532	227532	Proteobacteria	Gammaproteobacteria	6.61867	66.3	-	JIFB01	11	6293	6110	4/14/14	3/9/17	Scaffold	Broad Institute	SAMN02402433	GCA_000629605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/629/605/GCA_000629605.1_Pseu_aeru_BWH049_V1	-	BWH049
Acinetobacter baumannii OIFC087	903929	PRJNA53459	53459	Proteobacteria	Gammaproteobacteria	4.00468	39	-	AMFS01	96	3926	3666	10/31/12	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00761219	GCA_000309095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/095/GCA_000309095.1_gacin42v1.0	-	OIFC087
Streptococcus agalactiae GB00919	1154949	PRJNA86571	86571	Terrabacteria group	Firmicutes	2.25679	35.3	-	ANQW01	43	2353	2207	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN02436256	GCA_000322485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/485/GCA_000322485.1_ASM32248v1	-	GB00919
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	1.96761	41.3	-	CEHG01	73	1959	1870	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234085	GCA_000946215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/215/GCA_000946215.1_Velvet_assembly	-	S94U
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.57033	38.2	-	FJBQ01	33	3284	3132	2/20/16	3/27/17	Contig	SC	SAMEA1966760	GCA_900057545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/545/GCA_900057545.1_10771_1_38	-	2531STDY5467319
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.75884	50.7	-	CWUJ01	432	5447	4562	7/16/15	2/24/17	Scaffold	SC	SAMEA3345056	GCA_001248745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/745/GCA_001248745.1_H14146070501	-	70501ss_1
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.09265	68.2	-	LWUT01	301	7452	6847	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208557	GCA_001976415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/415/GCA_001976415.1_ASM197641v1	-	2002721740
Vibrio cholerae O1 biovar El Tor	686	PRJNA242378	242378	Proteobacteria	Gammaproteobacteria	3.9995	47.5	-	JNGU01	234	3734	3621	6/19/14	3/24/17	Contig	Central Research Institute for Epidemiology	SAMN02693470	GCA_000710445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/445/GCA_000710445.1_vch3_v1	25035324	Ogawa RND19188
Clostridioides difficile	1496	PRJEB12076	305716	Terrabacteria group	Firmicutes	4.23893	28.5	-	FAXM01	256	3950	3819	12/11/15	3/19/17	Contig	IFPEN	SAMEA3699156	GCA_001497755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/755/GCA_001497755.1_IT1118	-	-
Vibrio Parahaemolyticus VIP4-0439	1408166	PRJNA222555	222555	Proteobacteria	Gammaproteobacteria	5.13787	45.3	-	AXNK01	90	4877	4719	11/29/13	3/24/17	Contig	The Chinese University of Hong Kong	SAMN02471132	GCA_000500365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/365/GCA_000500365.1_VIP4-0439	-	VIP4-0439
Klebsiella pneumoniae CHS 11	1438717	PRJNA234180	234180	Proteobacteria	Gammaproteobacteria	5.67044	57.1	-	JMWO01	9	5741	5467	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581313	GCA_000693255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/255/GCA_000693255.1_Kleb_pneu_CHS_11_V1	-	CHS 11
Enterococcus faecalis EnGen0374	1157393	PRJNA88419	88419	Terrabacteria group	Firmicutes	3.28712	37.1	-	AIRA01	42	3462	3301	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808887	GCA_000396285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/285/GCA_000396285.1_Ente_faec_B2867_V1	-	B2867
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.1015	52.4	-	MBAY01	191	2440	2129	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04852979	GCA_001858935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/935/GCA_001858935.1_ASM185893v1	-	USO_SI10-010
Enterococcus faecium	1352	PRJNA272091	272091	Terrabacteria group	Firmicutes	2.65729	38.2	-	LRPV01	84	2664	2463	2/2/16	3/27/17	Scaffold	The Genome Institute at Washington University	SAMN03850948	GCA_001546375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/375/GCA_001546375.1_ASM154637v1	-	MJR8396B
Candidatus Gullanella endobia	1070130	PRJEB12067	316504	Proteobacteria	Gammaproteobacteria	0.938041	28.9	chromosome I:NZ_LN999832.1/LN999832.1	-	1	525	464	3/26/16	4/12/17	Complete Genome	UNIVERSITY OF SOUTH BOHEMIA	SAMEA3725906	GCA_900048035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/035/GCA_900048035.1_GEFVIR	-	-
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.01075	60.2	-	FCGP01	18	4728	4576	1/21/16	3/27/17	Scaffold	SC	SAMEA2273911	GCA_001539645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/645/GCA_001539645.1_12082_2_46	-	2880STDY5682838
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.60133	31.7	-	FBPA01	35	1607	1533	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683456	GCA_001488495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/495/GCA_001488495.1_H042840283	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.94022	55.4	-	FJWJ01	24	4810	4612	4/5/16	3/28/17	Scaffold	SC	SAMEA2273301	GCA_900075275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/275/GCA_900075275.1_11983_7_77	-	e1127
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15792	64.2	-	FSCE01	24	5156	5016	12/14/16	3/21/17	Contig	SC	SAMEA2071451	GCA_900132735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/735/GCA_900132735.1_10250_1_21	-	361
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.55649	67.3	-	MEBO01	53	6821	6464	11/18/16	6/28/17	Contig	Menzies School of Health Research	SAMN05712684	GCA_001882875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/875/GCA_001882875.1_ASM188287v1	-	MSMB0717
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	5.12508	54.9	-	LVUO01	205	5178	4767	4/25/16	3/28/17	Contig	JCVI	SAMN04572690	GCA_001631835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/835/GCA_001631835.1_ASM163183v1	-	GN05698
Pseudomonas sp. B36(2017)	1981721	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.39947	60.7	-	NEIY01	32	5810	5674	4/27/17	5/3/17	Contig	University of Sao Paulo	SAMN06771353	GCA_002112905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/905/GCA_002112905.1_ASM211290v1	-	B36(2017)
Streptomyces sp. MMG1121	1415544	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.4539	71.3	-	LGDV01	273	8556	7896	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900641	GCA_001280015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/015/GCA_001280015.1_ASM128001v1	-	MMG1121
Streptomyces sp. NRRL WC-3723	1519491	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.3699	71.8	-	LGDX01	374	9459	8627	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900643	GCA_001280045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/045/GCA_001280045.1_ASM128004v1	-	NRRL WC-3723
Pseudomonas sp. B31(2017)	1981726	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.39996	60.7	-	NEJD01	32	5810	5673	4/27/17	5/3/17	Contig	University of Sao Paulo	SAMN06771348	GCA_002112965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/965/GCA_002112965.1_ASM211296v1	-	B31(2017)
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA259658	259658	Proteobacteria	Gammaproteobacteria	4.89517	55.5	-	LVVD01	102	4815	4598	4/25/16	3/28/17	Contig	JCVI	SAMN04572704	GCA_001631925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/925/GCA_001631925.1_ASM163192v1	-	GN06275
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.8722	66.8	-	NQMZ01	66	7188	6790	8/28/17	9/20/17	Contig	Menzies School of Health Research	SAMN07502068	GCA_002276065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/065/GCA_002276065.1_Bp8961	28910350	Bp8961
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18604	64.2	-	FVFX01	29	5191	5043	3/10/17	3/18/17	Contig	SC	SAMEA2071452	GCA_900132755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/755/GCA_900132755.1_10250_1_24	-	364
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.94755	55.1	-	FJXU01	34	4818	4595	4/5/16	3/28/17	Scaffold	SC	SAMEA2273369	GCA_900075285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/285/GCA_900075285.1_11983_6_50	-	e1267
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75117	31.2	-	FAYJ01	25	1846	1747	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683005	GCA_001488515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/515/GCA_001488515.1_EC3615	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.00905	60.1	-	FCKF01	16	4763	4592	1/21/16	3/27/17	Scaffold	SC	SAMEA2274026	GCA_001539665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/665/GCA_001539665.1_12082_3_51	-	2880STDY5682954
Borrelia parkeri HR1	1435045	PRJNA231102	231102	Spirochaetes	Spirochaetia	1.03068	28.9	chromosome:NZ_CP007022.1/CP007022.1	-	2	976	927	12/30/13	4/9/17	Complete Genome	University of California Irvine	SAMN02641595	GCA_000512145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/145/GCA_000512145.2_ASM51214v2	24526628	HR1
Enterococcus faecium C68	565664	PRJNA306037	306037	Terrabacteria group	Firmicutes	3.2307	37.8	-	LPUE01	7	3361	3107	3/8/16	3/27/17	Scaffold	Brown University/Rhode Island Hospital	SAMN04338411	GCA_001582105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/105/GCA_001582105.1_ASM158210v1	27151808	C68
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.10102	52.4	-	MBAZ01	180	2460	2134	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04852980	GCA_001858955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/955/GCA_001858955.1_ASM185895v1	-	USO_SP10-030
Enterococcus faecalis EnGen0208	1157394	PRJNA88421	88421	Terrabacteria group	Firmicutes	3.20687	37.2	-	AIRB01	22	3373	3223	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808888	GCA_000396305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/305/GCA_000396305.1_Ente_faec_B2949_V1	-	B2949
Klebsiella pneumoniae CHS 12	1438718	PRJNA234181	234181	Proteobacteria	Gammaproteobacteria	5.94538	56.9	-	JMWP01	9	6052	5756	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581314	GCA_000693275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/275/GCA_000693275.1_Kleb_pneu_CHS_12_V1	-	CHS 12
Vibrio parahaemolyticus VIP4-0407	1408168	PRJNA222557	222557	Proteobacteria	Gammaproteobacteria	5.09606	45.3	-	AXNM01	91	4849	4699	11/29/13	3/24/17	Contig	The Chinese University of Hong Kong	SAMN02471133	GCA_000500405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/405/GCA_000500405.1_VIP4-0407	-	VIP4-0407
Clostridioides difficile	1496	PRJNA321988	321988	Terrabacteria group	Firmicutes	4.24979	28.6	-	LYDP01	44	3962	3812	7/1/16	3/20/17	Contig	University of Florence	SAMN05007345	GCA_001678145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/145/GCA_001678145.1_ASM167814v1	-	CD8-15
Vibrio cholerae O1 biovar El Tor	686	PRJNA242254	242254	Proteobacteria	Gammaproteobacteria	4.00548	47.5	-	JNGT01	179	3765	3640	6/19/14	3/24/17	Contig	Central Research Institute for Epidemiology	SAMN02691893	GCA_000710455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/455/GCA_000710455.1_vch2	25035324	Ogawa RND19191
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.0553	68.2	-	LWUY01	289	7358	6771	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208562	GCA_001976465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/465/GCA_001976465.1_ASM197646v1	-	2002721789
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.70606	50.7	-	CWYV01	400	5236	4524	7/16/15	2/24/17	Scaffold	SC	SAMEA2445726	GCA_001248765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/765/GCA_001248765.1_12971_8_40	-	H104480143
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.57992	38.2	-	FJCA01	37	3295	3141	2/20/16	3/27/17	Contig	SC	SAMEA2058466	GCA_900057555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/555/GCA_900057555.1_10060_4_55	-	2531STDY5467336
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.16476	40.9	-	CEIV01	167	2168	2035	2/18/15	3/17/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233984	GCA_000946235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/235/GCA_000946235.1_Velvet_assembly	-	S11K
Streptococcus agalactiae GB00999	1154969	PRJNA86611	86611	Terrabacteria group	Firmicutes	2.09601	35.4	-	ANQP01	22	2154	2046	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN02436308	GCA_000322505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/505/GCA_000322505.1_ASM32250v1	-	GB00999
Acinetobacter baumannii OIFC065	903932	PRJNA53465	53465	Proteobacteria	Gammaproteobacteria	4.02965	38.8	-	AMFV01	54	3945	3787	10/31/12	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00761244	GCA_000309115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/115/GCA_000309115.1_gacin45v1.0	-	OIFC065
Pseudomonas aeruginosa RB	1407649	PRJDB1483	244623	Proteobacteria	Gammaproteobacteria	6.20054	66.6	-	BAUN01	78	5882	5719	4/15/14	3/16/17	Scaffold	Osaka University	SAMD00036777	GCA_000647935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/935/GCA_000647935.2_ASM64793v2	-	RB
Leptospira interrogans serovar Bataviae str. 2006006959	1049801	PRJNA74191	74191	Spirochaetes	Spirochaetia	4.70945	35	-	AHPY01	319	4269	3876	2/3/12	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00739366	GCA_000246135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/135/GCA_000246135.2_CLC_glsol034	-	2006006959
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.75613	38.4	-	LRGP01	15	1728	1658	5/6/16	3/28/17	Contig	Menzies School of Health Research	SAMN03988136	GCA_001638265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/265/GCA_001638265.1_ASM163826v1	-	SST2093-1
Neisseria meningitidis 2007461	1145176	PRJNA83565	83565	Proteobacteria	Betaproteobacteria	2.19887	52	-	APUK01	146	2531	2123	6/21/13	3/21/17	Contig	IGS	SAMN01780126	GCA_000413195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/195/GCA_000413195.2_ASM41319v2	-	2007461
Helicobacter pylori Hp A-20	992037	PRJNA64101	64101	Proteobacteria	delta/epsilon subdivisions	1.6746	39.2	-	AKOE01	10	1657	1481	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778862	GCA_000275285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/285/GCA_000275285.1_ASM27528v1	23661595	Hp A-20
Streptococcus pneumoniae	1313	PRJNA242496	242496	Terrabacteria group	Firmicutes	2.18826	39.6	-	JHAN01	135	2364	2039	5/18/14	3/9/17	Contig	Research Institute of Physical-Chemical Medicine	SAMN02697211	GCA_000692035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/035/GCA_000692035.1_Spn.str2298_v1.0	-	2298
secondary endosymbiont of Heteropsylla cubana	134287	PRJNA165199	165199	Proteobacteria	Gammaproteobacteria	1.1216	28.9	chromosome:NC_018420.1/CP003547.1	-	1	608	548	8/13/12	9/4/17	Complete Genome	Yale University	SAMN02604352	GCA_000287355.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/355/GCA_000287355.1_ASM28735v1	22821013	-
Mycobacterium tuberculosis MD17021	1447469	PRJNA234582	234582	Terrabacteria group	Actinobacteria	4.37663	65.6	-	JLFK01	91	4328	4115	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584620	GCA_000650375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/375/GCA_000650375.1_Myco_tube_MD17021_V1	-	MD17021
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.60227	31.9	-	JWFW01	137	2571	2473	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03196986	GCA_001068475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/475/GCA_001068475.1_ASM106847v1	26230489	1022_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	4.95618	35.4	-	NHVC01	62	5380	5060	6/19/17	6/22/17	Contig	"OARSA, CFSAN"	SAMN07163262	GCA_002199285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/285/GCA_002199285.1_ASM219928v1	-	MOD1_Bc201
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.1064	37.8	-	JOXG01	47	3206	3081	7/15/14	2/26/17	Contig	Cornell University	SAMN02741489	GCA_000726605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/605/GCA_000726605.1_ASM72660v1	-	FSL R8-5576
Yersinia pestis I1994006	755910	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.49834	47.7	-	ADSN01	1247	4371	3963	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403087	GCA_000325065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/065/GCA_000325065.1_ASM32506v1	23271803	I1994006
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69509	30.5	-	CULF01	13	1773	1670	3/31/15	3/18/17	Contig	SC	SAMEA1010456	GCA_001225045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/045/GCA_001225045.1_7038_3_95	-	OXC6345
Rickettsia typhi str. TH1527	1003201	PRJNA65219	65219	Proteobacteria	Alphaproteobacteria	1.11237	28.9	chromosome:NC_017066.1/CP003397.1	-	1	882	827	3/21/12	4/7/17	Complete Genome	Los Alamos National Lab	SAMN02603529	GCA_000277285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/285/GCA_000277285.1_ASM27728v1	-	TH1527
Staphylococcus aureus M0375	1158528	PRJNA88965	88965	Terrabacteria group	Firmicutes	2.93467	33	-	AJCU01	14	3084	2912	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809181	GCA_000361005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/005/GCA_000361005.1_Stap_aure_M0375_V1	-	M0375
Staphylococcus aureus M0391	1157027	PRJNA88611	88611	Terrabacteria group	Firmicutes	2.9013	32.9	-	AIWN01	8	3039	2873	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792153	GCA_000361025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/025/GCA_000361025.1_Stap_aure_M0391_V1	-	M0391
Rickettsia typhi str. B9991CWPP	1003202	PRJNA65221	65221	Proteobacteria	Alphaproteobacteria	1.11296	28.9	chromosome:NC_017062.1/CP003398.1	-	1	882	827	3/21/12	4/7/17	Complete Genome	Los Alamos National Lab	SAMN02603530	GCA_000277305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/277/305/GCA_000277305.1_ASM27730v1	-	B9991CWPP
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.63119	30.5	-	CULK01	20	1724	1621	3/31/15	3/18/17	Contig	SC	SAMEA1010414	GCA_001225065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/065/GCA_001225065.1_7065_7_12	-	OXC6358
Yersinia pestis I2001001	755916	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.50947	47.5	-	ADSO01	1526	4576	3926	12/7/12	6/15/17	Contig	Beijing Genomics Institute	SAMN02403088	GCA_000325085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/085/GCA_000325085.1_ASM32508v1	23271803	I2001001
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09466	37.9	-	JOXC01	22	3131	3044	7/15/14	2/26/17	Contig	Cornell University	SAMN02741484	GCA_000726625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/625/GCA_000726625.1_ASM72662v1	-	FSL R8-5463
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.19118	35.3	-	NHUE01	78	5599	5301	6/19/17	6/22/17	Contig	"OARSA, CFSAN"	SAMN07163323	GCA_002199425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/425/GCA_002199425.1_ASM219942v1	-	MOD1_Bc63
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.53743	31.9	-	JWFV01	124	2492	2399	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03196987	GCA_001068495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/495/GCA_001068495.1_ASM106849v1	26230489	1023_SEPI
Mycobacterium tuberculosis MD17503	1447470	PRJNA234583	234583	Terrabacteria group	Actinobacteria	4.35048	65.4	-	JLFJ01	114	4323	4119	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584621	GCA_000650395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/395/GCA_000650395.1_Myco_tube_MD17503_V1	-	MD17503
Clostridium novyi NT	386415	PRJNA16820	16820	Terrabacteria group	Firmicutes	2.54772	28.9	chromosome:NC_008593.1/CP000382.1	-	1	2392	2240	11/17/06	3/29/17	Complete Genome	Johns Hopkins Kimmel Comprehensive Cancer Center	SAMN02603464	GCA_000014125.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/125/GCA_000014125.1_ASM1412v1	17115055	NT
Streptococcus pneumoniae	1313	PRJNA229402	229402	Terrabacteria group	Firmicutes	2.10732	39.7	-	JFIQ01	237	2210	1959	10/2/14	3/10/17	Contig	Harvard Medical School / Massachusetts Eye and Ear Infirmary	SAMN02641271	GCA_000762505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/505/GCA_000762505.1_Sp_0072.v1.0	-	ECC_0072
Helicobacter pylori Hp A-4	992032	PRJNA64091	64091	Proteobacteria	delta/epsilon subdivisions	1.664	39.2	-	AKOA01	8	1636	1464	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778868	GCA_000275305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/305/GCA_000275305.2_ASM27530v2	23661595	Hp A-4
Neisseria meningitidis NM134	1145177	PRJNA83567	83567	Proteobacteria	Betaproteobacteria	2.18801	51.7	-	APUL01	131	2513	2140	6/21/13	3/21/17	Contig	IGS	SAMN01780127	GCA_000413215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/215/GCA_000413215.2_ASM41321v2	-	NM134
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.77343	38.4	-	LRGF01	26	1777	1683	5/6/16	3/28/17	Contig	Menzies School of Health Research	SAMN03988143	GCA_001638335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/335/GCA_001638335.1_ASM163833v1	-	SST1019-1
Leptospira interrogans serovar Lai str. Lai	1049911	PRJNA74197	74197	Spirochaetes	Spirochaetia	4.60031	34.9	-	AHQB01	256	4139	3812	2/3/12	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00739369	GCA_000246195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/195/GCA_000246195.2_CLC_glsol048	-	Lai
Pseudomonas aeruginosa	287	PRJNA244576	244576	Proteobacteria	Gammaproteobacteria	6.82028	66.1	-	JOVK01	1	6525	6356	8/25/14	3/10/17	Scaffold	Los Alamos National Laboratory	SAMN02870863	GCA_000743405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/405/GCA_000743405.1_PAG	25278526	PAG
Acinetobacter baumannii OIFC099	903930	PRJNA53461	53461	Proteobacteria	Gammaproteobacteria	3.91818	39	-	AMFT01	75	3780	3580	10/31/12	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00761236	GCA_000309135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/135/GCA_000309135.1_gacin43v1.0	-	OIFC099
Streptococcus agalactiae MRI Z1-200	1154837	PRJNA86333	86333	Terrabacteria group	Firmicutes	2.06955	35.4	-	ANQM01	22	2131	2009	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN02436213	GCA_000322525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/525/GCA_000322525.1_ASM32252v1	-	MRI Z1-200
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.12043	41.1	-	CEEM01	150	2140	2006	2/14/15	3/17/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233929	GCA_000946255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/255/GCA_000946255.1_Velvet_assembly	-	LS5R
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.4163	38.3	-	FJEG01	12	3117	3022	2/20/16	3/27/17	Contig	SC	SAMEA2064380	GCA_900057565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/565/GCA_900057565.1_10771_3_58	-	2531STDY5467435
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.46154	50.8	-	CXEZ01	364	4790	4241	7/16/15	2/24/17	Scaffold	SC	SAMEA954819	GCA_001248785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/785/GCA_001248785.1_5417_3_8	-	CS8_1361424
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.22411	68.1	-	LWVC01	175	7480	6923	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208566	GCA_001976475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/475/GCA_001976475.1_ASM197647v1	-	4027a
Vibrio cholerae	666	PRJNA242443	242443	Proteobacteria	Gammaproteobacteria	3.8661	47.8	-	JIDK01	118	3663	3433	7/31/14	3/24/17	Contig	Los Alamos National Laboratory	SAMN02693888	GCA_000736765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/765/GCA_000736765.1_GFC_10	25212618	133-73
Clostridioides difficile	1496	PRJNA329452	329452	Terrabacteria group	Firmicutes	4.04439	28.7	-	MBMH01	106	3761	3509	8/14/16	3/21/17	Contig	"West China Hospital, Sichuan University"	SAMN05413023	GCA_001704755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/755/GCA_001704755.1_ASM170475v1	-	106
Vibrio parahaemolyticus VIP4-0434	1408169	PRJNA222558	222558	Proteobacteria	Gammaproteobacteria	5.06123	45.3	-	AXNN01	75	4826	4643	11/29/13	3/24/17	Contig	The Chinese University of Hong Kong	SAMN02471130	GCA_000500425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/425/GCA_000500425.1_VIP4-0434	-	VIP4-0434
Klebsiella pneumoniae CHS 13	1438719	PRJNA234182	234182	Proteobacteria	Gammaproteobacteria	5.92134	56.9	-	JMWQ01	10	6012	5712	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581315	GCA_000693295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/295/GCA_000693295.1_Kleb_pneu_CHS_13_V1	-	CHS 13
Enterococcus faecalis EnGen0209	1157395	PRJNA88423	88423	Terrabacteria group	Firmicutes	3.28553	37.1	-	AIRF01	41	3462	3283	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808889	GCA_000396325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/325/GCA_000396325.1_Ente_faec_B3119_V1	-	B3119
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.12215	52.4	-	MBBA01	150	2467	2165	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04852981	GCA_001858985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/985/GCA_001858985.1_ASM185898v1	-	USO_NL10-070
Enterococcus faecium	1352	PRJNA245745	245745	Terrabacteria group	Firmicutes	3.0908	37.8	-	JMMX01	12	3148	2918	7/28/16	3/28/17	Scaffold	"Harvard Medical School, Massachusetts Eye and Ear Infirmary"	SAMN02739345	GCA_001696305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/305/GCA_001696305.1_UCN72.1	-	UCN72
Rickettsia typhi str. Wilmington	257363	PRJNA10679	10679	Proteobacteria	Alphaproteobacteria	1.1115	28.9	chromosome:NC_006142.1/AE017197.1	-	1	881	825	8/19/04	4/6/17	Complete Genome	"Human Genome Sequencing Center, Baylor College of Medicine"	SAMN02603327	GCA_000008045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/045/GCA_000008045.1_ASM804v1	15317790	Wilmington
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.17221	60	-	FCLI01	23	4879	4721	1/21/16	3/27/17	Scaffold	SC	SAMEA2274055	GCA_001539685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/685/GCA_001539685.1_12082_3_79	-	2880STDY5682983
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65986	31.4	-	FBBO01	24	1719	1625	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683104	GCA_001488535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/535/GCA_001488535.1_EC5259	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.69069	55.1	-	FJWY01	60	4594	4356	4/5/16	3/28/17	Scaffold	SC	SAMEA2273302	GCA_900075295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/295/GCA_900075295.1_11983_7_78	-	e1132
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.28276	64	-	FSCF01	16	5346	5180	12/14/16	3/21/17	Contig	SC	SAMEA2071445	GCA_900132775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/775/GCA_900132775.1_10250_1_3	-	343
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.52921	67.2	-	NQMX01	67	6877	6491	8/28/17	9/20/17	Contig	Menzies School of Health Research	SAMN07502070	GCA_002276075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/075/GCA_002276075.1_Bp8964	28910350	Bp8964
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.08575	54.9	-	NEYN01	76	5057	4804	6/9/17	6/12/17	Contig	JCVI	SAMN06812668	GCA_002184445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/445/GCA_002184445.1_ASM218444v1	-	ARLG-2980
Pseudomonas sp. B29(2017)	1981729	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.16462	60.7	-	NEJG01	34	5615	5469	4/27/17	5/3/17	Contig	University of Sao Paulo	SAMN06771345	GCA_002112985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/985/GCA_002112985.1_ASM211298v1	-	B29(2017)
Streptomyces sp. NRRL B-1140	1415549	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.20693	71.3	-	LGEA01	184	7366	7027	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900646	GCA_001280065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/065/GCA_001280065.1_ASM128006v1	-	NRRL B-1140
Streptomyces sp. NRRL F-6491	1519495	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.75459	73.1	-	LGEE01	287	6972	6515	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900650	GCA_001280095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/095/GCA_001280095.1_ASM128009v1	-	NRRL F-6491
Pseudomonas sp. B27(2017)	1981731	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.16037	60.8	-	NEJI01	21	5658	5536	4/27/17	5/3/17	Contig	University of Sao Paulo	SAMN06771343	GCA_002113055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/055/GCA_002113055.1_ASM211305v1	-	B27(2017)
Enterobacter hormaechei	158836	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.101	56	-	NJEZ01	2	5111	4786	6/23/17	6/26/17	Contig	US Food and Drug Administration 	SAMN06173299	GCA_002206155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/155/GCA_002206155.1_ASM220615v1	-	FDAARGOS_286
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.53149	67.2	-	NQNA01	59	6900	6512	8/28/17	9/20/17	Contig	Menzies School of Health Research	SAMN07502067	GCA_002276095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/095/GCA_002276095.1_Bp8960	28910350	Bp8960
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.38403	64.2	-	FVGB01	37	5426	5207	3/10/17	3/18/17	Contig	SC	SAMEA2070675	GCA_900132795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/795/GCA_900132795.1_10250_1_7	-	347
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.24714	54.7	-	FJWR01	78	5190	4929	4/5/16	3/28/17	Scaffold	SC	SAMEA2273213	GCA_900075305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/305/GCA_900075305.1_12082_4_44	-	e1105
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65996	31.4	-	FBCJ01	19	1726	1629	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683126	GCA_001488555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/555/GCA_001488555.1_EC4473	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.20121	60	-	FCGZ01	24	4909	4757	1/21/16	3/27/17	Scaffold	SC	SAMEA2273916	GCA_001539705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/705/GCA_001539705.1_12082_2_51	-	2880STDY5682843
Clostridioides difficile	1496	PRJNA360826	360826	Terrabacteria group	Firmicutes	4.19151	28.8	chromosome:CP019469.1	-	1	-	-	2/3/17	2/3/17	Complete Genome	Georgia State University	SAMN06215603	GCA_001984465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/465/GCA_001984465.1_ASM198446v1	-	LEM1
Enterococcus faecium	1352	PRJNA329509	329509	Terrabacteria group	Firmicutes	2.91498	37.8	-	MSHS01	327	3040	2817	5/22/17	5/31/17	Scaffold	Intermountain Healthcare	SAMN05413846	GCA_002158275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/158/275/GCA_002158275.1_ASM215827v1	-	IHC1
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.10756	52.4	-	MBBB01	150	2449	2133	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04852982	GCA_001859005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/005/GCA_001859005.1_ASM185900v1	-	USO_NL10-083
Enterococcus faecalis EnGen0210	1157396	PRJNA88425	88425	Terrabacteria group	Firmicutes	3.29711	37.1	-	AIRH01	42	3496	3302	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808890	GCA_000396345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/345/GCA_000396345.1_Ente_faec_B3196_V1	-	B3196
Klebsiella pneumoniae CHS 14	1438720	PRJNA234183	234183	Proteobacteria	Gammaproteobacteria	5.91396	56.9	-	JMWR01	10	5950	5677	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581316	GCA_000693315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/315/GCA_000693315.1_Kleb_pneu_CHS_14_V1	-	CHS 14
Vibrio parahaemolyticus VIP4-0430	1408170	PRJNA222559	222559	Proteobacteria	Gammaproteobacteria	5.56412	45.7	-	AXNO01	1009	5126	4928	11/29/13	4/11/17	Contig	The Chinese University of Hong Kong	SAMN02471135	GCA_000500445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/445/GCA_000500445.1_VIP4-0430	-	VIP4-0430
Clostridioides difficile	1496	PRJNA329452	329452	Terrabacteria group	Firmicutes	4.0123	28.4	-	MBGC01	162	3722	3468	8/14/16	3/20/17	Contig	"West China Hospital, Sichuan University"	SAMN05413017	GCA_001704795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/795/GCA_001704795.1_ASM170479v1	-	103
Vibrio cholerae	666	PRJNA242443	242443	Proteobacteria	Gammaproteobacteria	3.94695	47.7	-	JMBM01	117	3709	3535	7/31/14	3/24/17	Contig	Los Alamos National Laboratory	SAMN02693893	GCA_000736775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/775/GCA_000736775.1_GFC_15	25212618	984-81
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.07379	68.1	-	LWVE01	147	7324	6818	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208568	GCA_001976485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/485/GCA_001976485.1_ASM197648v1	-	4069a
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.58794	50.9	-	CXAX01	377	4927	4435	7/16/15	2/24/17	Scaffold	SC	SAMEA954691	GCA_001248805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/805/GCA_001248805.1_5008_8_1	-	ShIB1_401077
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54414	38.3	-	FJIP01	62	3238	3089	2/20/16	3/27/17	Contig	SC	SAMEA2080682	GCA_900057575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/575/GCA_900057575.1_10625_2_74	-	2532STDY5467547
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03777	41.2	-	CEHF01	63	2020	1920	2/18/15	3/17/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234081	GCA_000946495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/495/GCA_000946495.1_Velvet_assembly	-	S93E
Streptococcus agalactiae MRI Z1-201	1154838	PRJNA86335	86335	Terrabacteria group	Firmicutes	2.01482	35.4	-	ANQL01	19	2061	1927	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN02436251	GCA_000322545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/545/GCA_000322545.1_ASM32254v1	-	MRI Z1-201
Acinetobacter baumannii OIFC111	903935	PRJNA53471	53471	Proteobacteria	Gammaproteobacteria	3.98806	39.1	-	AMFY01	44	3803	3615	10/31/12	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00761246	GCA_000309155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/155/GCA_000309155.1_gacin48v1.0	-	OIFC111
Pseudomonas aeruginosa	287	PRJNA259996	259996	Proteobacteria	Gammaproteobacteria	6.98066	65.8	-	JRAU01	227	6831	6423	11/14/14	3/16/17	Scaffold	China CDC	SAMN03014600	GCA_000783275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/275/GCA_000783275.1_ASM78327v1	25540339	PDR
Leptospira interrogans serovar Lai str. Lai LPS mutant	1049912	PRJNA74199	74199	Spirochaetes	Spirochaetia	4.59889	34.9	-	AHQC01	250	4148	3821	2/3/12	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00739370	GCA_000246215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/215/GCA_000246215.2_CLC_glsol049	-	Lai LPS mutant
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.78184	38.4	-	LRGN01	14	1797	1709	5/6/16	3/28/17	Contig	Menzies School of Health Research	SAMN03988134	GCA_001638415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/415/GCA_001638415.1_ASM163841v1	-	SST2091-1
Neisseria meningitidis 98002	1145178	PRJNA83569	83569	Proteobacteria	Betaproteobacteria	2.19791	52	-	APUM01	142	2561	2157	6/21/13	3/21/17	Contig	IGS	SAMN01780128	GCA_000413235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/413/235/GCA_000413235.2_ASM41323v2	-	98002
Helicobacter pylori Hp H-10	992063	PRJNA64153	64153	Proteobacteria	delta/epsilon subdivisions	1.64982	39.2	-	AKPB01	32	1645	1459	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778859	GCA_000275325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/325/GCA_000275325.1_ASM27532v1	-	Hp H-10
Streptococcus pneumoniae	1313	PRJNA229402	229402	Terrabacteria group	Firmicutes	2.1134	39.7	-	JFIR01	216	2218	1967	10/2/14	3/10/17	Contig	Harvard Medical School / Massachusetts Eye and Ear Infirmary	SAMN02641272	GCA_000762525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/525/GCA_000762525.1_Sp_0083.v1.0	-	ECC_0083
Clostridioides difficile	1496	PRJNA274772	274772	Terrabacteria group	Firmicutes	4.16708	28.8	chromosome:NZ_CP010888.1/CP010888.1	-	1	3882	3647	2/29/16	9/21/17	Complete Genome	Canadian Science Centre for Human and Animal Health	SAMN03332454	GCA_001577795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/795/GCA_001577795.1_ASM157779v1	-	08ACD0030
Mycobacterium tuberculosis MD17517	1447471	PRJNA234584	234584	Terrabacteria group	Actinobacteria	4.41873	65.6	-	JLFI01	92	4336	4129	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584622	GCA_000650415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/415/GCA_000650415.1_Myco_tube_MD17517_V1	-	MD17517
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.53126	31.9	-	JWEO01	131	2445	2340	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197020	GCA_001068545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/545/GCA_001068545.1_ASM106854v1	26230489	1056_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.19758	35.4	-	NHUK01	73	5617	5305	6/19/17	6/22/17	Contig	"OARSA, CFSAN"	SAMN07163317	GCA_002199485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/485/GCA_002199485.1_ASM219948v1	-	MOD1_Bc180
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09767	37.7	-	JOXL01	23	3203	3100	7/15/14	2/26/17	Contig	Cornell University	SAMN02741494	GCA_000726635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/635/GCA_000726635.1_ASM72663v1	-	FSL R8-5726
Yersinia pestis J1963002	755936	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.43476	47.8	-	ADSP01	1119	4218	3916	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403089	GCA_000325105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/105/GCA_000325105.1_ASM32510v1	23271803	J1963002
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66954	30.4	-	CUSD01	15	1749	1650	3/31/15	3/18/17	Contig	SC	SAMEA1010426	GCA_001225105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/105/GCA_001225105.1_7092_1_85	-	OXC6532
Spiroplasma chrysopicola DF-1	1276227	PRJNA184747	184747	Terrabacteria group	Tenericutes	1.12332	28.8	chromosome:NC_021280.1/CP005077.1	-	1	1051	991	5/22/13	4/17/17	Complete Genome	Academia Sinica	SAMN02602968	GCA_000400935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/935/GCA_000400935.1_ASM40093v1	23711669	DF-1
Staphylococcus aureus M0396	1158529	PRJNA88967	88967	Terrabacteria group	Firmicutes	2.77558	32.8	-	AJCV01	6	2882	2710	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809182	GCA_000361045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/045/GCA_000361045.1_Stap_aure_M0396_V1	-	M0396
Staphylococcus aureus M0404	1224929	PRJNA173477	173477	Terrabacteria group	Firmicutes	2.93265	32.9	-	ANZT01	7	3089	2910	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN01125842	GCA_000361065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/065/GCA_000361065.1_Stap_aure_M0404_V1	-	M0404
Clostridium argentinense	29341	PRJNA302051	302051	Terrabacteria group	Firmicutes	4.80306	28.7388	chromosome:NZ_CP014176.1/CP014176.1; plasmid pRSJ17_1:NZ_CP014175.1/CP014175.1	-	2	4301	4056	3/29/17	4/4/17	Complete Genome	Los Alamos National Laboratory	SAMN04263500	GCA_002074155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/155/GCA_002074155.1_ASM207415v1	-	89G
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70141	30.4	-	CUQP01	20	1816	1729	3/31/15	3/18/17	Contig	SC	SAMEA1010322	GCA_001225165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/165/GCA_001225165.1_7092_1_49	-	OXC6496
Yersinia pestis J1978002	755912	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.5323	47.5	-	ADSQ01	1098	4430	4032	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403090	GCA_000325125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/125/GCA_000325125.1_ASM32512v1	23271803	J1978002
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09482	37.9	-	JOXK01	20	3146	3045	7/15/14	2/26/17	Contig	Cornell University	SAMN02741493	GCA_000726655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/655/GCA_000726655.1_ASM72665v1	-	FSL R8-5686
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.18997	35.3	-	NHUX01	109	5598	5291	6/19/17	6/22/17	Contig	"OARSA, CFSAN"	SAMN07163270	GCA_002199905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/905/GCA_002199905.1_ASM219990v1	-	MOD1_Bc193
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.59311	31.9	-	JWEI01	144	2557	2458	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197026	GCA_001068575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/575/GCA_001068575.1_ASM106857v1	26230489	1062_SEPI
Mycobacterium tuberculosis MD17647	1447472	PRJNA234585	234585	Terrabacteria group	Actinobacteria	4.38632	65.6	-	JLFH01	89	4323	4107	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584623	GCA_000650435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/435/GCA_000650435.1_Myco_tube_MD17647_V1	-	MD17647
Clostridioides difficile	1496	PRJNA231221	231221	Terrabacteria group	Firmicutes	4.28543	28.7191	chromosome:NZ_CP020424.1/CP020424.1; plasmid unnamed1:NZ_CP020425.1/CP020425.1; plasmid unnamed2:NZ_CP020426.1/CP020426.1	-	3	4028	3555	3/29/17	4/1/17	Complete Genome	US Food and Drug Administration 	SAMN04875593	GCA_002073735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/735/GCA_002073735.1_ASM207373v1	-	FDAARGOS_267
Streptococcus pneumoniae	1313	PRJNA229402	229402	Terrabacteria group	Firmicutes	2.03656	39.6	-	JFJF01	286	2183	2026	10/2/14	3/4/17	Contig	Harvard Medical School / Massachusetts Eye and Ear Infirmary	SAMN02641380	GCA_000762825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/825/GCA_000762825.1_Sp_0381.v1.0	-	SC_0381
Helicobacter pylori Hp P-28b	992114	PRJNA64255	64255	Proteobacteria	delta/epsilon subdivisions	1.6199	39.2	-	AKQM01	11	1607	1438	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778909	GCA_000275345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/345/GCA_000275345.2_ASM27534v2	-	Hp P-28b
Neisseria meningitidis 96037	1190569	PRJNA166947	166947	Proteobacteria	Betaproteobacteria	2.24187	51.6	-	AVNK01	143	2595	2198	8/19/13	3/21/17	Contig	IGS	SAMN01984850	GCA_000448005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/005/GCA_000448005.1_ASM44800v1	-	96037
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.77597	38.4	-	LRGL01	21	1780	1685	5/6/16	3/28/17	Contig	Menzies School of Health Research	SAMN03988144	GCA_001638465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/465/GCA_001638465.1_ASM163846v1	-	SST2088-1
Leptospira interrogans serovar Lai str. Langkawi	1049913	PRJNA74201	74201	Spirochaetes	Spirochaetia	4.77168	35.1	-	AHQD01	304	4367	4001	2/3/12	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00739371	GCA_000246235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/235/GCA_000246235.2_CLC_glsol050	-	Langkawi
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.64713	66	-	JTMS01	101	6477	6247	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105751	GCA_000791385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/385/GCA_000791385.1_AZPAE15054	25367914	AZPAE15054
Acinetobacter baumannii Naval-2	903922	PRJNA53443	53443	Proteobacteria	Gammaproteobacteria	4.12655	39.1	-	AMSX01	114	4102	3898	10/31/12	5/18/17	Contig	Walter Reed Army Institute of Research	SAMN00761227	GCA_000309175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/175/GCA_000309175.1_gacin34v1.0	-	Naval-2
Streptococcus agalactiae FSL S3-034	1154779	PRJNA86149	86149	Terrabacteria group	Firmicutes	2.25589	35.7	-	ANPZ01	106	2382	2152	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN02436209	GCA_000322565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/565/GCA_000322565.1_ASM32256v1	-	FSL S3-034
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	1.95753	41.3	-	CEJZ01	67	1941	1853	2/18/15	3/16/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234031	GCA_000946595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/595/GCA_000946595.1_Velvet_assembly	-	S17I
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54145	38.3	-	FJJT01	62	3238	3091	2/20/16	3/27/17	Contig	SC	SAMEA2077778	GCA_900057585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/585/GCA_900057585.1_10625_2_70	-	2532STDY5467543
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.67989	50.7	-	CWYN01	386	5222	4488	7/16/15	2/24/17	Scaffold	SC	SAMEA2445718	GCA_001248825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/825/GCA_001248825.1_12971_8_34	-	H102840285
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.14573	68.2	-	LWVD01	144	7366	6823	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208567	GCA_001976495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/495/GCA_001976495.1_ASM197649v1	-	4032a
Vibrio cholerae	666	PRJNA242443	242443	Proteobacteria	Gammaproteobacteria	3.96914	47.4	-	JMBL01	118	3718	3515	7/31/14	3/24/17	Contig	Los Alamos National Laboratory	SAMN02693892	GCA_000736785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/785/GCA_000736785.1_GFC_14	25212618	1421-77
Clostridioides difficile	1496	PRJNA329452	329452	Terrabacteria group	Firmicutes	4.15261	28.4	-	MBGB01	150	3962	3681	8/14/16	3/21/17	Contig	"West China Hospital, Sichuan University"	SAMN05413025	GCA_001704805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/805/GCA_001704805.1_ASM170480v1	-	133
Vibrio parahaemolyticus VIP4-0444	1408173	PRJNA222562	222562	Proteobacteria	Gammaproteobacteria	5.27192	45.2	-	AXNR01	106	5084	4887	11/29/13	3/24/17	Contig	The Chinese University of Hong Kong	SAMN02471134	GCA_000500485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/485/GCA_000500485.1_VIP4-0444	-	VIP4-0444
Klebsiella pneumoniae CHS 17	1438723	PRJNA234186	234186	Proteobacteria	Gammaproteobacteria	5.67305	57	-	JMWS01	9	5710	5453	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581319	GCA_000693335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/335/GCA_000693335.1_Kleb_pneu_CHS_17_V1	-	CHS 17
Enterococcus faecalis EnGen0211	1157397	PRJNA88427	88427	Terrabacteria group	Firmicutes	3.29851	37.1	-	AIRI01	26	3481	3317	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808892	GCA_000396365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/365/GCA_000396365.1_Ente_faec_B3286_V1	-	B3286
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.0963	52.5	-	MBBC01	171	2415	2129	11/1/16	3/28/17	Contig	Orebro University Hospital	SAMN04852983	GCA_001859015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/015/GCA_001859015.1_ASM185901v1	-	USO_05BE11-003
Enterococcus faecium	1352	PRJNA329509	329509	Terrabacteria group	Firmicutes	2.92975	37.8	-	MSHR01	326	3045	2841	5/22/17	5/31/17	Scaffold	Intermountain Healthcare	SAMN05413847	GCA_002158285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/158/285/GCA_002158285.1_ASM215828v1	-	IHC2
Clostridioides difficile ATCC 9689 = DSM 1296	1121308	PRJNA281308	281308	Terrabacteria group	Firmicutes	4.2862	28.7191	chromosome:CP011968.1;  phiCDIF1296T:CP011970.1; plasmid unnamed:CP011969.1	-	3	3984	3846	7/8/15	8/23/17	Complete Genome	Norddeutsches Zentrum für Mikrobielle Genomforschung	SAMN03486969	GCA_001077535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/535/GCA_001077535.1_ASM107753v1	-	ATCC 9689 = DSM 1296
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.18485	59.8	-	FCGW01	18	4975	4812	1/21/16	3/27/17	Scaffold	SC	SAMEA2273912	GCA_001539725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/725/GCA_001539725.1_12082_2_47	-	2880STDY5682839
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.74964	31.1	-	FBQP01	37	1823	1683	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683498	GCA_001488595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/595/GCA_001488595.1_H062140681	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.05703	55.2	-	FJXK01	42	4929	4697	4/5/16	3/28/17	Scaffold	SC	SAMEA2273281	GCA_900075315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/315/GCA_900075315.1_11983_7_57	-	e1025
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.33946	64.1	-	FSCG01	28	5450	5280	12/14/16	3/21/17	Contig	SC	SAMEA2068817	GCA_900132805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/805/GCA_900132805.1_10250_1_5	-	345
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.80236	66.9	-	NQNB01	68	7178	6760	8/28/17	9/20/17	Contig	Menzies School of Health Research	SAMN07502066	GCA_002276105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/105/GCA_002276105.1_Bp8958	28910350	Bp8958
Enterobacter hormaechei	158836	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	4.82179	55.5	-	NJCO01	78	4759	4553	8/2/17	8/4/17	Contig	JCVI	SAMN05960959	GCA_002239945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/945/GCA_002239945.1_ASM223994v1	-	HB_Z_2180
Pseudomonas sp. B1(2017)	1981739	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.164	60.7	-	NEJQ01	36	5624	5468	4/27/17	5/3/17	Contig	University of Sao Paulo	SAMN06771335	GCA_002113135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/135/GCA_002113135.1_ASM211313v1	-	B1(2017)
Streptomyces sp. NRRL F-6492	1519497	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.75311	73.1	-	LGEG01	287	6991	6524	9/4/15	3/11/17	Contig	University of Illinois	SAMN02900652	GCA_001280125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/125/GCA_001280125.1_ASM128012v1	-	NRRL F-6492
Streptomyces sp. XY332	1415561	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.61203	71.7	-	LGHN01	243	7869	7348	9/10/15	3/11/17	Contig	University of Illinois	SAMN02900624	GCA_001280885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/885/GCA_001280885.1_ASM128088v1	-	XY332
Pseudomonas sp. R31(2017)	1981691	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.26903	60.3	-	NEHU01	23	5774	5625	4/27/17	5/3/17	Contig	University of Sao Paulo	SAMN06771383	GCA_002113405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/405/GCA_002113405.1_ASM211340v1	-	R31(2017)
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.21155	55.2	-	NPZP01	141	5306	4978	8/11/17	8/15/17	Contig	JCVI	SAMN07450568	GCA_002246615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/615/GCA_002246615.1_ASM224661v1	-	KPCRETH17
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.73269	66.9	-	NQNC01	65	7100	6668	8/28/17	9/20/17	Contig	Menzies School of Health Research	SAMN07502065	GCA_002276145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/145/GCA_002276145.1_Bp8955	28910350	Bp8955
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.93135	64.1	-	FVGA01	9	4944	4830	3/10/17	3/18/17	Contig	SC	SAMEA2071446	GCA_900132815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/815/GCA_900132815.1_10250_1_6	-	346
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.19841	55	-	FJXL01	57	5100	4868	4/5/16	3/28/17	Scaffold	SC	SAMEA2273287	GCA_900075325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/325/GCA_900075325.1_11983_7_63	-	e1070
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68412	31.3	-	FBKC01	17	1737	1643	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683322	GCA_001488615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/615/GCA_001488615.1_H095340114b	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.00969	60.1	-	FCIM01	18	4759	4603	1/21/16	3/27/17	Scaffold	SC	SAMEA2273962	GCA_001539745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/745/GCA_001539745.1_12082_2_93	-	2880STDY5682889
Clostridium butyricum	1492	PRJNA304074	304074	Terrabacteria group	Firmicutes	4.62789	28.7132	chromosome 1:NZ_CP013252.1/CP013252.1; chromosome 2:NZ_CP013489.1/CP013489.1	-	2	4135	3912	12/3/15	4/5/17	Complete Genome	"Shin's Lab., Kyungpook National University"	SAMN04293668	GCA_001456065.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/065/GCA_001456065.2_ASM145606v2	-	KNU-L09
Enterococcus faecium	1352	PRJNA329509	329509	Terrabacteria group	Firmicutes	2.92105	37.8	-	MSHU01	384	3041	2809	5/22/17	5/31/17	Scaffold	Intermountain Healthcare	SAMN05413849	GCA_002158295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/158/295/GCA_002158295.1_ASM215829v1	-	IHC4
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.10067	52.5	-	MBBD01	148	2449	2136	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04852984	GCA_001859045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/045/GCA_001859045.1_ASM185904v1	-	USO_05BE11-005
Enterococcus faecalis EnGen0212	1157398	PRJNA88429	88429	Terrabacteria group	Firmicutes	3.129	37.3	-	AIRJ01	12	3192	3027	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808893	GCA_000396385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/385/GCA_000396385.1_Ente_faec_B3336_V1	-	B3336
Klebsiella pneumoniae CHS 18	1438724	PRJNA234187	234187	Proteobacteria	Gammaproteobacteria	5.65754	57.1	-	JMWT01	11	5708	5460	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581320	GCA_000693355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/355/GCA_000693355.1_Kleb_pneu_CHS_18_V1	-	CHS 18
Vibrio Parahaemolyticus VIP4-0395	1408165	PRJNA222554	222554	Proteobacteria	Gammaproteobacteria	5.12005	45.3	-	AXNJ01	86	4858	4723	11/29/13	3/24/17	Contig	The Chinese University of Hong Kong	SAMN02471128	GCA_000500505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/505/GCA_000500505.1_VIP4-0395	-	VIP4-0395
Clostridioides difficile	1496	PRJNA239262	239262	Terrabacteria group	Firmicutes	4.18181	28.8	-	JFOH01	65	3854	3674	10/11/16	3/20/17	Contig	University of Technology Sydney	SAMN02650257	GCA_001757585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/585/GCA_001757585.1_ASM175758v1	-	19.3
Vibrio cholerae	666	PRJNA242443	242443	Proteobacteria	Gammaproteobacteria	3.91371	47.6	-	JIDI01	94	3651	3432	7/31/14	3/24/17	Contig	Los Alamos National Laboratory	SAMN02693886	GCA_000736795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/795/GCA_000736795.1_GFC_8	25212618	5473-62
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.11423	68.2	-	LWVG01	155	7345	6816	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208570	GCA_001976545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/545/GCA_001976545.1_ASM197654v1	-	4108a
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.73273	50.7	-	CWZL01	391	5268	4557	7/16/15	2/24/17	Scaffold	SC	SAMEA2445755	GCA_001248885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/885/GCA_001248885.1_12971_8_64	-	H133320345
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54117	38.3	-	FJKC01	58	3236	3089	2/20/16	3/27/17	Contig	SC	SAMEA2080690	GCA_900057595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/595/GCA_900057595.1_10625_3_5	-	2532STDY5467574
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.21029	41.3	-	CEJS01	213	2211	2079	2/18/15	3/17/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233957	GCA_000946615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/615/GCA_000946615.1_Velvet_assembly	-	LS9G
Streptococcus agalactiae FSL S3-027	1154785	PRJNA86161	86161	Terrabacteria group	Firmicutes	2.16744	35.4	-	ANPU01	123	2246	2120	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN02436304	GCA_000322585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/585/GCA_000322585.1_ASM32258v1	-	FSL S3-027
Acinetobacter baumannii Naval-21	903923	PRJNA53445	53445	Proteobacteria	Gammaproteobacteria	3.9238	38.9	-	AMSY01	75	3836	3633	10/31/12	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00761242	GCA_000309195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/195/GCA_000309195.1_gacin35v1.0	-	Naval-21
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.33962	66.4	-	JTMU01	95	6006	5779	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105749	GCA_000791465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/465/GCA_000791465.1_AZPAE15052	25367914	AZPAE15052
Leptospira interrogans serovar Bataviae str. Swart	1049805	PRJNA74203	74203	Spirochaetes	Spirochaetia	4.72188	35	-	AHQE01	318	4277	3883	2/3/12	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00739372	GCA_000246255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/255/GCA_000246255.2_CLC_glsol051	-	Swart
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.74382	38.3	-	LRGO01	17	1719	1627	5/6/16	3/28/17	Contig	Menzies School of Health Research	SAMN03988135	GCA_001638505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/505/GCA_001638505.1_ASM163850v1	-	SST2092-1
Neisseria meningitidis 2002030	1190570	PRJNA166949	166949	Proteobacteria	Betaproteobacteria	2.2098	51.7	-	AVNL01	139	2547	2176	8/19/13	3/21/17	Contig	IGS	SAMN01984851	GCA_000448025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/025/GCA_000448025.1_ASM44802v1	-	2002030
Helicobacter pylori Hp P-4c	992102	PRJNA64231	64231	Proteobacteria	delta/epsilon subdivisions	1.67829	39.1	-	AKQD01	7	1649	1504	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778910	GCA_000275365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/365/GCA_000275365.2_ASM27536v2	-	Hp P-4c
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.01271	39.6	-	CDQC01	95	2216	2011	1/29/15	3/4/17	Contig	SC	SAMEA1023802	GCA_000832325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/325/GCA_000832325.1_6714_8_8	-	SMRU560
Clostridium butyricum	1492	PRJNA303063	303063	Terrabacteria group	Firmicutes	4.61833	28.712	chromosome 1:NZ_CP013352.1/CP013352.1; chromosome 2:NZ_CP013353.1/CP013353.1; plasmid unnamed:NZ_CP013354.1/CP013354.1	-	3	4141	3931	12/10/15	4/4/17	Complete Genome	Anhui University	SAMN04285352	GCA_001465175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/465/175/GCA_001465175.1_ASM146517v1	-	JKY6D1
Mycobacterium tuberculosis MD17613	1447474	PRJNA234587	234587	Terrabacteria group	Actinobacteria	4.42673	65.6	-	JLFF01	96	4353	4134	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584625	GCA_000650455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/455/GCA_000650455.1_Myco_tube_MD17613_V1	-	MD17613
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.47415	31.9	-	JWEF01	116	2395	2320	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197029	GCA_001068585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/585/GCA_001068585.1_ASM106858v1	26230489	1067_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.99215	34.7	-	NIRC01	93	6248	5856	6/19/17	6/22/17	Contig	"OARSA, CFSAN"	SAMN07205610	GCA_002200085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/085/GCA_002200085.1_ASM220008v1	-	MOD1_Bc230
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.10512	37.8	-	JOXS01	27	3201	3090	7/15/14	2/26/17	Contig	Cornell University	SAMN02741501	GCA_000726685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/685/GCA_000726685.1_ASM72668v1	-	FSL R8-5805
Yersinia pestis K11973002	755928	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.38331	47.6	-	ADSR01	910	4154	3918	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403091	GCA_000325145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/145/GCA_000325145.1_ASM32514v1	-	K11973002
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.65046	30.3	-	CUOO01	12	1730	1621	3/31/15	3/18/17	Contig	SC	SAMEA1010360	GCA_001225205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/205/GCA_001225205.1_7065_7_88	-	OXC6436
Clostridium butyricum	1492	PRJNA327147	327147	Terrabacteria group	Firmicutes	4.46355	28.7091	chromosome 1:CP016332.1; chromosome 2:CP016333.1; plasmid unnamed:CP016334.1	-	3	3980	3786	9/26/16	9/26/16	Complete Genome	Tianjin University of Science and Tecnology	SAMN05323103	GCA_001746555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/555/GCA_001746555.1_ASM174655v1	-	TK520
Staphylococcus aureus M0408	1157028	PRJNA88613	88613	Terrabacteria group	Firmicutes	2.93284	32.9	-	AIWO01	9	3023	2817	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00792154	GCA_000361085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/085/GCA_000361085.1_Stap_aure_M0408_V1	-	M0408
Staphylococcus aureus M0415	1224930	PRJNA173478	173478	Terrabacteria group	Firmicutes	2.89931	32.9	-	ANZU01	9	3061	2894	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN01125843	GCA_000361105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/105/GCA_000361105.1_Stap_aure_M0415_V1	-	M0415
Clostridium tetani 12124569	1231072	PRJEB4542	218016	Terrabacteria group	Firmicutes	2.86585	28.7022	chromosome:NC_022777.1/HG530135.1; plasmid p12124569:NC_022778.1/HG530136.1	-	2	2813	2604	11/5/13	4/10/17	Complete Genome	URMITE	SAMEA3283140	GCA_000967115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/967/115/GCA_000967115.1_CT1	-	12124569
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.72431	30.4	-	CUQT01	16	1845	1708	3/31/15	3/18/17	Contig	SC	SAMEA1010543	GCA_001225265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/265/GCA_001225265.1_7092_1_51	-	OXC6498
Yersinia pestis K21985002	755927	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.39914	47.7	-	ADSS01	1264	4300	3905	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403092	GCA_000325165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/165/GCA_000325165.1_ASM32516v1	23271803	K21985002
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.0465	37.9	-	JOXM01	26	3095	2994	7/15/14	2/26/17	Contig	Cornell University	SAMN02741495	GCA_000726695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/695/GCA_000726695.1_ASM72669v1	-	FSL R8-5744
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.55143	31.9	-	JWDK01	146	2509	2425	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197050	GCA_001068635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/635/GCA_001068635.1_ASM106863v1	26230489	1088_SEPI
Mycobacterium tuberculosis MD16775	1447475	PRJNA234588	234588	Terrabacteria group	Actinobacteria	4.42912	65.6	-	JLFE01	96	4350	4138	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584626	GCA_000650475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/475/GCA_000650475.1_Myco_tube_MD16775_V1	-	MD16775
Clostridium cochlearium	1494	PRJEB6403	251923	Terrabacteria group	Firmicutes	2.43542	28.7	chromosome 1:NZ_LT906477.1/LT906477.1	-	1	2414	2249	8/15/17	8/28/17	Complete Genome	SC	SAMEA4530647	GCA_900187165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/165/GCA_900187165.1_52121_G02	-	NCTC13027
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.13702	39.3	-	CDPY01	136	2323	2118	1/29/15	3/4/17	Contig	SC	SAMEA1023754	GCA_000939355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/355/GCA_000939355.1_6714_8_5	-	SMRU557
Helicobacter pylori Hp P-26	992085	PRJNA64197	64197	Proteobacteria	delta/epsilon subdivisions	1.6972	39	-	AKPT01	9	1658	1493	6/28/12	3/23/17	Contig	Institute for Genome Sciences	SAMN00778890	GCA_000275385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/385/GCA_000275385.1_ASM27538v1	23661595	Hp P-26
Neisseria meningitidis NM3141	1190571	PRJNA166951	166951	Proteobacteria	Betaproteobacteria	2.2502	51.6	-	AVNM01	137	2601	2235	8/19/13	3/15/17	Contig	IGS	SAMN01984852	GCA_000448045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/045/GCA_000448045.1_ASM44804v1	-	NM3141
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.75607	38.4	-	LRGQ01	11	1747	1657	5/6/16	3/28/17	Contig	Menzies School of Health Research	SAMN03988137	GCA_001638525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/525/GCA_001638525.1_ASM163852v1	-	SST2094-1
Leptospira interrogans serovar Bataviae str. Kariadi-Satu	1049803	PRJNA74205	74205	Spirochaetes	Spirochaetia	4.68185	35	-	AHQF01	331	4230	3843	2/3/12	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00739373	GCA_000246275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/275/GCA_000246275.2_CLC_glsol052	-	Kariadi-Satu
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.03958	65.9	-	JTQD01	86	6892	6669	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105662	GCA_000791835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/835/GCA_000791835.1_AZPAE14964	25367914	AZPAE14964
Acinetobacter baumannii WC-A-694	903925	PRJNA53449	53449	Proteobacteria	Gammaproteobacteria	4.0081	39	-	AMTA01	82	3893	3692	10/31/12	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00761243	GCA_000309215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/215/GCA_000309215.1_gacin37v1.0	-	WC-A-694
Streptococcus agalactiae FSL S3-568	1154793	PRJNA86177	86177	Terrabacteria group	Firmicutes	2.20121	35.7	-	ANPR01	202	2318	2118	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN02436187	GCA_000322605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/605/GCA_000322605.1_ASM32260v1	-	FSL S3-568
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.26764	41.3	-	CECW01	153	2211	2096	2/14/15	3/17/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233881	GCA_000946655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/655/GCA_000946655.1_Velvet_assembly	-	LS0A
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54089	38.3	-	FJKU01	56	3235	3092	2/20/16	3/27/17	Contig	SC	SAMEA2080791	GCA_900057605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/605/GCA_900057605.1_10625_3_56	-	2532STDY5467625
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.52441	50.6	-	CXBZ01	416	4817	4306	7/16/15	2/24/17	Scaffold	SC	SAMEA954624	GCA_001248925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/925/GCA_001248925.1_5236_3_12	-	ShIB3580_440836
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.11297	68.2	-	LWVJ01	165	7367	6859	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208573	GCA_001976565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/565/GCA_001976565.1_ASM197656v1	-	4147a
Vibrio cholerae	666	PRJNA242443	242443	Proteobacteria	Gammaproteobacteria	4.01818	47.5	-	JMBN01	81	3821	3691	7/31/14	3/24/17	Contig	Los Alamos National Laboratory	SAMN02693883	GCA_000736845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/845/GCA_000736845.1_GFC_18	25212618	63-93 (MO45)
Clostridioides difficile	1496	PRJNA239265	239265	Terrabacteria group	Firmicutes	4.31757	29.1	-	JFOF01	74	4079	3868	10/11/16	3/20/17	Contig	University of Technology Sydney	SAMN02650258	GCA_001757605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/605/GCA_001757605.1_ASM175760v1	-	7.10492
Vibrio parahaemolyticus VIP4-0219	1408172	PRJNA222561	222561	Proteobacteria	Gammaproteobacteria	5.17815	45.2	-	AXNQ01	79	4905	4727	11/29/13	3/24/17	Contig	The Chinese University of Hong Kong	SAMN02471131	GCA_000500525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/525/GCA_000500525.1_VIP4-0219	-	VIP4-0219
Klebsiella pneumoniae CHS 19	1438725	PRJNA234188	234188	Proteobacteria	Gammaproteobacteria	5.95669	56.9	-	JMWU01	13	6042	5756	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581321	GCA_000693375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/375/GCA_000693375.1_Kleb_pneu_CHS_19_V1	-	CHS 19
Enterococcus faecalis EnGen0213	1157399	PRJNA88431	88431	Terrabacteria group	Firmicutes	3.29385	37.2	-	AIRK01	39	3471	3285	5/3/13	4/10/17	Scaffold	Broad Institute	SAMN00808894	GCA_000396405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/405/GCA_000396405.1_Ente_faec_B4008_V1	-	B4008
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.09958	52.4	-	MBBE01	152	2452	2142	11/1/16	3/28/17	Contig	Orebro University Hospital	SAMN04852985	GCA_001859055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/055/GCA_001859055.1_ASM185905v1	-	USO_05BE11-011
Enterococcus faecium	1352	PRJNA329509	329509	Terrabacteria group	Firmicutes	2.94104	37.7	-	MSHV01	279	3091	2881	5/22/17	5/31/17	Scaffold	Intermountain Healthcare	SAMN05413850	GCA_002158325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/158/325/GCA_002158325.1_ASM215832v1	-	IHC5
Clostridioides difficile	1496	PRJNA369458	369458	Terrabacteria group	Firmicutes	4.12438	28.7	chromosome:NZ_CP019870.1/CP019870.1	-	1	3785	3594	2/28/17	3/2/17	Complete Genome	Kyung Hee University	SAMN06286529	GCA_002007885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/885/GCA_002007885.1_ASM200788v1	-	BR81
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.1063	60	-	FCHM01	14	4851	4694	1/21/16	3/27/17	Scaffold	SC	SAMEA2273931	GCA_001539765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/765/GCA_001539765.1_12082_2_65	-	2880STDY5682858
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65922	31.4	-	FBDC01	19	1717	1621	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683144	GCA_001488635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/635/GCA_001488635.1_EC3623	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.64613	55.8	-	FJXI01	35	4553	4342	4/5/16	3/28/17	Scaffold	SC	SAMEA2273207	GCA_900075335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/335/GCA_900075335.1_12045_4_78	-	e1087
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.13532	64.2	-	FVGD01	21	5164	5009	3/10/17	3/18/17	Contig	SC	SAMEA2070703	GCA_900132825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/825/GCA_900132825.1_10625_4_75	-	75
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.79971	66.9	-	NQMY01	67	7188	6759	8/28/17	9/20/17	Contig	Menzies School of Health Research	SAMN07502069	GCA_002287335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/335/GCA_002287335.1_Bp8962	28910350	Bp8962
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.1317	55.2	-	BEGJ01	192	-	-	8/24/17	9/23/17	Contig	Toho University	SAMD00089515	GCA_002334665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/665/GCA_002334665.1_ASM233466v1	-	TUM11134
Pseudomonas sp. B33(2017)	1981724	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.1641	60.7	-	NEJB01	35	5621	5469	4/27/17	5/3/17	Contig	University of Sao Paulo	SAMN06771350	GCA_002113655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/655/GCA_002113655.1_ASM211365v1	-	B33(2017)
Streptomyces sp. NRRL B-24085	1709476	PRJNA293375	293375	Terrabacteria group	Actinobacteria	8.9634	71.3	-	LJBR01	692	8379	7659	9/14/15	3/11/17	Contig	USDA/ARS/NCAUR	SAMN04026160	GCA_001282115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/115/GCA_001282115.1_ASM128211v1	-	NRRL B-24085
Streptomyces sp. NRRL S-4	1519471	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.38456	70.6	-	LGKJ01	238	6429	6101	9/18/15	3/11/17	Contig	University of Illinois	SAMN02900599	GCA_001294345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/345/GCA_001294345.1_ASM129434v1	-	NRRL S-4
Pseudomonas sp. B25(2017)	1981733	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.16043	60.8	-	NEJK01	19	5663	5534	4/27/17	5/3/17	Contig	University of Sao Paulo	SAMN06771341	GCA_002113705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/705/GCA_002113705.1_ASM211370v1	-	B25(2017)
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.07253	55.3	-	BEGO01	104	-	-	8/24/17	9/23/17	Contig	Toho University	SAMD00089520	GCA_002334785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/785/GCA_002334785.1_ASM233478v1	-	TUM11140
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.12627	67.5	-	MECO01	30	6419	6075	9/8/16	6/28/17	Scaffold	Menzies School of Health Research	SAMN05712686	GCA_001722225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/225/GCA_001722225.1_ASM172222v1	-	MSMB0803
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16051	64.2	-	FVGC01	37	5169	5021	3/10/17	3/18/17	Contig	SC	SAMEA2071443	GCA_900132835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/835/GCA_900132835.1_10665_4_82	-	337
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.8496	55.4	-	FJXP01	37	4778	4564	4/5/16	3/28/17	Scaffold	SC	SAMEA2273299	GCA_900075345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/345/GCA_900075345.1_11983_7_75	-	e1163
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65955	31.4	-	FBGZ01	30	1717	1626	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683248	GCA_001488655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/655/GCA_001488655.1_EC3365	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.13519	60	-	FCFV01	15	4884	4734	1/21/16	3/27/17	Scaffold	SC	SAMEA2273900	GCA_001539785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/785/GCA_001539785.1_12082_2_36	-	2880STDY5682827
Clostridium saccharobutylicum	169679	PRJNA322799	322799	Terrabacteria group	Firmicutes	5.10829	28.7	chromosome:NZ_CP016086.1/CP016086.1	-	1	4415	4147	2/17/17	4/6/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05170520	GCA_002003285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/003/285/GCA_002003285.1_ASM200328v1	-	NCP 200
Enterococcus faecium	1352	PRJNA329509	329509	Terrabacteria group	Firmicutes	2.95931	37.7	-	MSHY01	339	3031	2888	5/22/17	5/31/17	Scaffold	Intermountain Healthcare	SAMN05413853	GCA_002158355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/158/355/GCA_002158355.1_ASM215835v1	-	IHC8
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.11286	52.4	-	MBBF01	140	2477	2150	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04852986	GCA_001859085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/085/GCA_001859085.1_ASM185908v1	-	USO_05BE11-020
Enterococcus faecalis EnGen0214	1157400	PRJNA88433	88433	Terrabacteria group	Firmicutes	3.23806	37.2	-	AIRL01	31	3404	3237	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808895	GCA_000396425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/425/GCA_000396425.1_Ente_faec_B4018_V1	-	B4018
Klebsiella pneumoniae CHS 20	1438726	PRJNA234189	234189	Proteobacteria	Gammaproteobacteria	5.47015	57.1	-	JMWV01	12	5474	5244	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581322	GCA_000693395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/395/GCA_000693395.1_Kleb_pneu_CHS_20_V1	-	CHS 20
Vibrio parahaemolyticus VIP4-0447	1408174	PRJNA222563	222563	Proteobacteria	Gammaproteobacteria	5.36708	45.2	-	AXNS01	113	5212	5023	11/29/13	3/24/17	Contig	The Chinese University of Hong Kong	SAMN02471137	GCA_000500545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/545/GCA_000500545.1_VIP4-0447	-	VIP4-0447
Clostridioides difficile	1496	PRJNA238844	238844	Terrabacteria group	Firmicutes	4.13819	28.7	-	JFOI01	76	3873	3709	10/11/16	3/20/17	Contig	University of Technology Sydney	SAMN02646541	GCA_001757615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/615/GCA_001757615.1_ASM175761v1	-	H3
Vibrio cholerae	666	PRJNA242443	242443	Proteobacteria	Gammaproteobacteria	3.97356	47.6	-	JIDJ01	130	3730	3523	7/31/14	3/24/17	Contig	Los Alamos National Laboratory	SAMN02693887	GCA_000736855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/855/GCA_000736855.1_GFC_9	25212618	1311-69
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.23936	68	-	LWVI01	497	7538	6931	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208572	GCA_001976575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/575/GCA_001976575.1_ASM197657v1	-	4114a
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.73853	50.9	-	CXDU01	353	5248	4592	7/16/15	2/24/17	Scaffold	SC	SAMEA954595	GCA_001248965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/965/GCA_001248965.1_5417_1_11	-	19911483_1361377
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.54214	38.3	-	FJLM01	63	3242	3092	2/20/16	3/27/17	Contig	SC	SAMEA2065725	GCA_900057615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/615/GCA_900057615.1_10396_8_33	-	2531STDY5467449
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04285	41.2	-	CEJY01	64	2022	1922	2/18/15	3/17/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234078	GCA_000946695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/695/GCA_000946695.1_Velvet_assembly	-	S92D
Streptococcus agalactiae FSL F2-338	1154803	PRJNA86197	86197	Terrabacteria group	Firmicutes	2.16277	35.8	-	ANPQ01	69	2211	2055	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00991070	GCA_000322625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/625/GCA_000322625.1_ASM32262v1	-	FSL F2-338
Acinetobacter baumannii OIFC035	903926	PRJNA53451	53451	Proteobacteria	Gammaproteobacteria	3.97261	39	-	AMTB01	44	3767	3611	10/31/12	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00761235	GCA_000309235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/235/GCA_000309235.1_gacin38v1.0	-	OIFC035
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.89472	66	-	JTNP01	93	6674	6452	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105728	GCA_000791855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/855/GCA_000791855.1_AZPAE15031	25367914	AZPAE15031
Leptospira interrogans serovar Bratislava str. Brem 137	1049815	PRJNA74209	74209	Spirochaetes	Spirochaetia	4.62908	35	-	AHQH01	270	4132	3762	2/3/12	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00739375	GCA_000246315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/315/GCA_000246315.2_CLC_glsol058	-	Brem 137
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.74543	38.3	-	LRGX01	13	1741	1626	5/6/16	4/10/17	Contig	Menzies School of Health Research	SAMN03988133	GCA_001638625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/625/GCA_001638625.1_ASM163862v1	-	SST2103-1
Neisseria meningitidis NM3139	1190572	PRJNA166953	166953	Proteobacteria	Betaproteobacteria	2.16222	51.8	-	AVNN01	113	2530	2110	8/19/13	3/21/17	Contig	IGS	SAMN01984853	GCA_000448065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/065/GCA_000448065.1_ASM44806v1	-	NM3139
Helicobacter pylori Hp P-30	992087	PRJNA64201	64201	Proteobacteria	delta/epsilon subdivisions	1.63981	38.8	-	AKPU01	4	1625	1469	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778871	GCA_000275405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/405/GCA_000275405.2_ASM27540v2	23661595	Hp P-30
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.06544	39.6	-	CDQB01	110	2261	2076	1/29/15	3/4/17	Contig	SC	SAMEA1023675	GCA_000942775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/775/GCA_000942775.1_6714_8_2	-	SMRU554
Clostridium saccharobutylicum	169679	PRJNA322798	322798	Terrabacteria group	Firmicutes	5.1083	28.7	chromosome:NZ_CP016089.1/CP016089.1	-	1	4417	4145	2/17/17	4/6/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05170519	GCA_002003325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/003/325/GCA_002003325.1_ASM200332v1	-	BAS/B3/SW/136
Mycobacterium tuberculosis MD17240	1447476	PRJNA234589	234589	Terrabacteria group	Actinobacteria	4.39341	65.6	-	JLFD01	73	4316	4126	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584627	GCA_000650495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/495/GCA_000650495.1_Myco_tube_MD17240_V1	-	MD17240
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.91249	31.7	-	JWBR01	524	2840	2628	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197095	GCA_001068755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/755/GCA_001068755.1_ASM106875v1	26230489	114_SEPI
Bacillus cereus	1396	PRJNA243069	243069	Terrabacteria group	Firmicutes	5.46244	35.1	-	JHQN01	84	5835	5519	5/12/14	3/24/17	Scaffold	Centers for Disease Control and Prevention	SAMN02712363	GCA_000688755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/755/GCA_000688755.1_CLC_6.0.4_of_Bacillus_cereus_BcFL2013	24874674	BcFL2013
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.0634	37.9	-	JOXN01	24	3107	3011	7/15/14	2/26/17	Contig	Cornell University	SAMN02741496	GCA_000726705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/705/GCA_000726705.1_ASM72670v1	-	FSL R8-5748
Yersinia pestis M0000002	755897	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.44167	47.8	-	ADST01	1135	4205	3900	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403093	GCA_000325185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/185/GCA_000325185.1_ASM32518v1	23271803	M0000002
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.68648	30.4	-	CUHW01	18	1767	1665	3/31/15	3/18/17	Contig	SC	SAMEA1010355	GCA_001225325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/325/GCA_001225325.1_7038_3_16	-	OXC6265
Clostridium saccharobutylicum	169679	PRJNA322800	322800	Terrabacteria group	Firmicutes	4.95093	28.7	chromosome:NZ_CP016091.1/CP016091.1	-	1	4314	4014	2/17/17	4/6/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05170521	GCA_002003365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/003/365/GCA_002003365.1_ASM200336v1	-	NCP 258
Staphylococcus aureus M0424	1158530	PRJNA88969	88969	Terrabacteria group	Firmicutes	2.96017	32.9	-	AJCW01	6	3144	2983	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809183	GCA_000361125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/125/GCA_000361125.1_Stap_aure_M0424_V1	-	M0424
Staphylococcus aureus M0427	1157029	PRJNA88615	88615	Terrabacteria group	Firmicutes	2.83873	32.9	-	AIWP01	2	2958	2797	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792155	GCA_000361145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/145/GCA_000361145.1_Stap_aure_M0427_V1	-	M0427
Clostridium saccharobutylicum	169679	PRJNA322820	322820	Terrabacteria group	Firmicutes	5.10818	28.7	chromosome:NZ_CP016092.1/CP016092.1	-	1	4416	4146	2/17/17	4/6/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05170518	GCA_002003385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/003/385/GCA_002003385.1_ASM200338v1	-	NCP 195
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.61647	30.5	-	CUVM01	17	1683	1582	3/31/15	3/18/17	Contig	SC	SAMEA1400811	GCA_001225345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/345/GCA_001225345.1_7213_3_81	-	OXC6626
Yersinia pestis MGJZ11	755959	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.51672	47.6	-	ADSU01	859	4265	4014	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403094	GCA_000325205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/205/GCA_000325205.1_ASM32520v1	23271803	MGJZ11
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	2.94887	37.9	-	JOXO01	16	3012	2910	7/15/14	2/26/17	Contig	Cornell University	SAMN02741497	GCA_000726725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/725/GCA_000726725.1_ASM72672v1	-	FSL R8-5760
Bacillus cereus	1396	PRJNA270586	270586	Terrabacteria group	Firmicutes	6.05557	35	-	LCYI01	65	6356	5910	5/18/15	3/26/17	Scaffold	University of Groningen	SAMN03267260	GCA_001008565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/565/GCA_001008565.1_ASM100856v1	26679589	B4077
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.5251	31.9	-	JVYA01	84	2471	2376	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197190	GCA_001068845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/845/GCA_001068845.1_ASM106884v1	26230489	1226_SEPI
Mycobacterium tuberculosis MD17656	1447479	PRJNA234592	234592	Terrabacteria group	Actinobacteria	4.43499	65.6	-	JLFA01	89	4368	4154	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584630	GCA_000650515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/515/GCA_000650515.1_Myco_tube_MD17656_V1	-	MD17656
Spiroplasma sp. NBRC 100390	1914410	PRJNA351766	351766	Terrabacteria group	Tenericutes	1.19962	28.7	chromosome:NZ_CP018022.1/CP018022.1	-	1	1068	1017	11/28/16	4/14/17	Complete Genome	Academia Sinica	SAMN05954264	GCA_001886495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/495/GCA_001886495.1_ASM188649v1	-	NBRC 100390
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11991	39.7	-	CDPX01	97	2258	2024	1/29/15	3/11/17	Contig	SC	SAMEA1023703	GCA_000945715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/715/GCA_000945715.1_6714_8_4	-	SMRU556
Helicobacter pylori Hp P-41	992088	PRJNA64203	64203	Proteobacteria	delta/epsilon subdivisions	1.71211	39.1	-	AKPV01	9	1674	1486	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778891	GCA_000275425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/425/GCA_000275425.2_ASM27542v2	23661595	Hp P-41
Neisseria meningitidis NM045	1190573	PRJNA166955	166955	Proteobacteria	Betaproteobacteria	2.26455	51.7	-	AVNO01	143	2606	2205	8/19/13	3/21/17	Contig	IGS	SAMN01984854	GCA_000448085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/085/GCA_000448085.1_ASM44808v1	-	NM045
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.77416	38.4	-	LRGY01	22	1771	1676	5/6/16	3/28/17	Contig	Menzies School of Health Research	SAMN03988128	GCA_001638655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/655/GCA_001638655.1_ASM163865v1	-	SST2229-1
Leptospira interrogans serovar Pyrogenes str. SriLanka1	1085542	PRJNA74219	74219	Spirochaetes	Spirochaetia	4.83713	35	-	AHQM01	667	4509	4024	2/3/12	5/18/17	Scaffold	J. Craig Venter Institute	SAMN00739381	GCA_000246415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/415/GCA_000246415.2_CLC_glsol068	-	SriLanka1
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.60863	66.2	-	JTNQ01	94	6288	6068	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105727	GCA_000791985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/985/GCA_000791985.1_AZPAE15030	25367914	AZPAE15030
Acinetobacter baumannii Naval-82	903921	PRJNA53441	53441	Proteobacteria	Gammaproteobacteria	3.90893	39.2	-	AMSW01	197	3913	3482	10/31/12	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00761226	GCA_000309255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/255/GCA_000309255.1_gacin33v1.0	-	Naval-82
Streptococcus agalactiae GB00954	1154959	PRJNA86591	86591	Terrabacteria group	Firmicutes	2.09294	35.4	-	ANQT01	91	2177	2023	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN02436255	GCA_000322645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/645/GCA_000322645.1_ASM32264v1	-	GB00954
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.08096	41.3	-	CEEA01	59	2030	1920	2/14/15	3/17/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233909	GCA_000946715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/715/GCA_000946715.1_Velvet_assembly	-	LS3A
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.48324	38.3	-	FJLP01	32	3187	3054	2/20/16	3/27/17	Contig	SC	SAMEA2080793	GCA_900057625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/625/GCA_900057625.1_10625_3_62	-	2532STDY5467631
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.72079	50.6	-	CWTH01	390	5486	4467	7/16/15	2/24/17	Scaffold	SC	SAMEA3345031	GCA_001248985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/985/GCA_001248985.1_H14090035601	-	35601ss_1
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.07731	68.2	-	LWVH01	162	7281	6751	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208571	GCA_001976585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/585/GCA_001976585.1_ASM197658v1	-	4112a
Vibrio cholerae	666	PRJNA242443	242443	Proteobacteria	Gammaproteobacteria	3.95273	47.5	-	JIDH01	111	3769	3625	7/31/14	3/24/17	Contig	Los Alamos National Laboratory	SAMN02693894	GCA_000736865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/865/GCA_000736865.1_GFC_7	25212618	NIH41
Clostridioides difficile	1496	PRJNA239264	239264	Terrabacteria group	Firmicutes	4.1809	28.8	-	JFOG01	58	3851	3672	10/11/16	3/20/17	Contig	University of Technology Sydney	SAMN02650259	GCA_001757625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/625/GCA_001757625.1_ASM175762v1	-	22.1
Vibrio parahaemolyticus M0605	1449358	PRJNA235181	235181	Proteobacteria	Gammaproteobacteria	5.42941	45.2	-	JALL01	116	5317	4349	1/27/14	4/11/17	Contig	"CIAD, A.C."	SAMN02584906	GCA_000523375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/375/GCA_000523375.1_M0605	24604636	M0605
Klebsiella pneumoniae CHS 22	1438728	PRJNA234191	234191	Proteobacteria	Gammaproteobacteria	5.91013	56.9	-	JMWW01	18	6001	5703	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581324	GCA_000693415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/415/GCA_000693415.1_Kleb_pneu_CHS_22_V1	-	CHS 22
Enterococcus faecalis EnGen0215	1157401	PRJNA88435	88435	Terrabacteria group	Firmicutes	3.28286	37.2	-	AIRM01	25	3469	3284	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808896	GCA_000396445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/445/GCA_000396445.1_Ente_faec_B4148_V1	-	B4148
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.06287	52.6	-	MBBG01	152	2411	2090	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04852987	GCA_001859095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/095/GCA_001859095.1_ASM185909v1	-	USO_DK11-110
Enterococcus faecium	1352	PRJNA329509	329509	Terrabacteria group	Firmicutes	2.96183	37.9	-	MSHZ01	282	3082	2889	5/22/17	5/31/17	Scaffold	Intermountain Healthcare	SAMN05413854	GCA_002158365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/158/365/GCA_002158365.1_ASM215836v1	-	IHC9
Spiroplasma sp. TU-14	1898044	PRJNA341843	341843	Terrabacteria group	Tenericutes	1.19964	28.7	chromosome:NZ_CP017658.1/CP017658.1	-	1	1069	1018	10/20/16	4/13/17	Complete Genome	Academia Sinica	SAMN05729610	GCA_001792795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/792/795/GCA_001792795.1_ASM179279v1	-	TU-14
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.05239	60	-	FCFP01	13	4817	4656	1/21/16	3/27/17	Scaffold	SC	SAMEA2273907	GCA_001539805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/805/GCA_001539805.1_12082_2_42	-	2880STDY5682834
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.59959	31.7	-	FBOA01	26	1610	1538	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683421	GCA_001488695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/695/GCA_001488695.1_H074080509	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.80544	55.4	-	FJWV01	43	4706	4496	4/5/16	3/28/17	Scaffold	SC	SAMEA2273286	GCA_900075355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/355/GCA_900075355.1_11983_7_62	-	e1069
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.26922	64.1	-	FSCH01	30	5297	5136	12/14/16	3/21/17	Contig	SC	SAMEA1971773	GCA_900132845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/845/GCA_900132845.1_10250_1_8	-	348
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.60698	67.2	-	MECN01	47	6918	6588	9/8/16	6/28/17	Scaffold	Menzies School of Health Research	SAMN05712687	GCA_001722235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/235/GCA_001722235.1_ASM172223v1	-	MSMB0842
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.08764	55.3	-	BEGP01	102	-	-	8/24/17	9/23/17	Contig	Toho University	SAMD00089521	GCA_002334805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/805/GCA_002334805.1_ASM233480v1	-	TUM11141
Pseudomonas sp. B21(2017)	1981737	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.16368	60.7	-	NEJO01	38	5618	5469	4/27/17	5/3/17	Contig	University of Sao Paulo	SAMN06771337	GCA_002113735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/735/GCA_002113735.1_ASM211373v1	-	B21(2017)
Streptomyces sp. JHA19	1577588	PRJDB3332	294062	Terrabacteria group	Actinobacteria	7.70877	71.9	-	BBRS01	70	7040	6786	8/26/15	3/12/17	Contig	Kyushu University	SAMD00023446	GCA_001417695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/695/GCA_001417695.1_ASM141769v1	26450739	JHA19
Streptomyces sp. NRRL F-5122	1609098	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.1628	70	-	LMWH01	312	9212	8526	1/7/16	3/12/17	Contig	University of Illinois	SAMN03327488	GCA_001507435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/435/GCA_001507435.1_ASM150743v1	-	NRRL F-5122
Pseudomonas sp. 1239	1985343	PRJNA382788	382788	Proteobacteria	Gammaproteobacteria	6.0244	64	-	NFSA01	68	5506	5316	5/25/17	6/27/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN06718837	GCA_002157495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/495/GCA_002157495.1_ASM215749v1	-	1239
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.56786	67.3	-	MECP01	68	6856	6471	9/8/16	6/28/17	Scaffold	Menzies School of Health Research	SAMN05712685	GCA_001722245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/245/GCA_001722245.1_ASM172224v1	-	MSMB0718
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.26771	64.1	-	FSCJ01	25	5339	5157	12/14/16	3/21/17	Contig	SC	SAMEA2071444	GCA_900132855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/855/GCA_900132855.1_10665_4_85	-	340
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.96111	55.4	-	FJWW01	61	4925	4657	4/5/16	3/28/17	Scaffold	SC	SAMEA2273487	GCA_900075365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/365/GCA_900075365.1_12082_4_59	-	e1083
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.61753	31.6	-	FBPR01	24	1638	1574	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683473	GCA_001488715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/715/GCA_001488715.1_H102740169	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.22717	59.8	-	FCLE01	29	4983	4841	1/21/16	3/27/17	Scaffold	SC	SAMEA2274050	GCA_001539825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/825/GCA_001539825.1_12082_3_74	-	2880STDY5682978
Clostridioides difficile BJ08	1224745	PRJNA173024	173024	Terrabacteria group	Firmicutes	4.13389	28.7	chromosome:CP003939.1	-	1	-	-	5/20/15	9/6/17	Complete Genome	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN03466598	GCA_001010825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/825/GCA_001010825.1_ASM101082v1	-	BJ08
Enterococcus faecium	1352	PRJNA329509	329509	Terrabacteria group	Firmicutes	2.96183	37.9	-	MSHX01	318	3085	2883	5/22/17	5/31/17	Scaffold	Intermountain Healthcare	SAMN05413852	GCA_002158375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/158/375/GCA_002158375.1_ASM215837v1	-	IHC7
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.11437	52.4	-	MBBH01	174	2445	2140	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04852988	GCA_001859125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/125/GCA_001859125.1_ASM185912v1	-	USO_DK11-135
Enterococcus faecalis EnGen0216	1157402	PRJNA88437	88437	Terrabacteria group	Firmicutes	3.338	37.1	-	AIRN01	41	3523	3358	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808897	GCA_000396465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/465/GCA_000396465.1_Ente_faec_B4163_V1	-	B4163
Klebsiella pneumoniae CHS 23	1438729	PRJNA234192	234192	Proteobacteria	Gammaproteobacteria	5.88841	56.9	-	JMWX01	10	5982	5700	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581325	GCA_000693435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/435/GCA_000693435.1_Kleb_pneu_CHS_23_V1	-	CHS 23
Vibrio parahaemolyticus CFSAN001595	1365187	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.09745	45.2	-	JFFP02	41	4914	4714	6/11/14	3/29/17	Contig	FDA/CFSAN	SAMN02252525	GCA_000701045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/045/GCA_000701045.2_ASM70104v2	25679989	CFSAN001595
Clostridioides difficile	1496	PRJNA274772	274772	Terrabacteria group	Firmicutes	4.21149	28.9	-	MOSV01	103	3864	3719	1/6/17	3/21/17	Contig	Canadian Science Centre for Human and Animal Health	SAMN05941461	GCA_001939005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/005/GCA_001939005.1_ASM193900v1	-	01A09CD0020
Vibrio cholerae	666	PRJNA242443	242443	Proteobacteria	Gammaproteobacteria	4.01222	47.6	-	JIDL01	151	3767	3558	7/31/14	3/24/17	Contig	Los Alamos National Laboratory	SAMN02693889	GCA_000736875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/875/GCA_000736875.1_GFC_11	25212618	1157-74
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.07222	68.2	-	LWVO01	155	7335	6821	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208578	GCA_001976625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/625/GCA_001976625.1_ASM197662v1	-	4169d
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.74779	50.7	-	CXGT01	402	5371	4575	7/16/15	2/24/17	Scaffold	SC	SAMEA1324257	GCA_001249005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/005/GCA_001249005.1_7655_8_14	-	H113080359
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.57078	38.2	-	FJAQ01	37	3290	3131	2/20/16	3/27/17	Contig	SC	SAMEA2058463	GCA_900057735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/735/GCA_900057735.1_10771_1_46	-	2531STDY5467327
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.14586	41	-	CEKS01	161	2139	1976	2/18/15	3/17/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234022	GCA_000946835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/835/GCA_000946835.1_Velvet_assembly	-	S16A
Streptococcus agalactiae GB00965	1154964	PRJNA86601	86601	Terrabacteria group	Firmicutes	2.05797	35.3	-	ANQQ01	37	2123	2037	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN02436214	GCA_000322665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/665/GCA_000322665.1_ASM32266v1	-	GB00965
Acinetobacter baumannii Canada BC1	903924	PRJNA53447	53447	Proteobacteria	Gammaproteobacteria	3.9364	39.1	-	AMSZ01	66	3859	3650	10/31/12	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00761234	GCA_000309275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/275/GCA_000309275.1_gacin36v1.0	-	Canada BC1
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.39992	66.4	-	JTPW01	150	6134	5837	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105669	GCA_000792025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/025/GCA_000792025.1_AZPAE14972	25367914	AZPAE14972
Leptospira interrogans serovar Pyrogenes str. SriLanka2	1085543	PRJNA74221	74221	Spirochaetes	Spirochaetia	4.90216	35.1	-	AHQN01	964	4654	4116	2/3/12	5/18/17	Scaffold	J. Craig Venter Institute	SAMN00739377	GCA_000246435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/435/GCA_000246435.2_CLC_glsol069	-	SriLanka2
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.81092	38.3	-	LRHE01	19	1823	1728	5/6/16	3/28/17	Contig	Menzies School of Health Research	SAMN03988148	GCA_001638755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/755/GCA_001638755.1_ASM163875v1	-	SST2238-1
Neisseria meningitidis NM151	1190574	PRJNA166957	166957	Proteobacteria	Betaproteobacteria	2.24943	51.7	-	AVNP01	142	2603	2153	8/19/13	3/21/17	Contig	IGS	SAMN01984859	GCA_000448105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/105/GCA_000448105.1_ASM44810v1	-	NM151
Helicobacter pylori Hp P-62	992089	PRJNA64205	64205	Proteobacteria	delta/epsilon subdivisions	1.64834	39.1	-	AKPW01	12	1627	1451	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778916	GCA_000275445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/445/GCA_000275445.2_ASM27544v2	23661595	Hp P-62
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14813	39.5	-	CDPZ01	148	2345	2116	1/29/15	3/4/17	Contig	SC	SAMEA1023737	GCA_000946055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/055/GCA_000946055.1_6714_8_6	-	SMRU558
Borrelia miyamotoi	47466	PRJNA269604	269604	Spirochaetes	Spirochaetia	0.907293	28.7	chromosome:NZ_CP010308.1/CP010308.1	-	1	845	776	12/23/14	4/10/17	Complete Genome	University of California Irvine	SAMN03255733	GCA_000807295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/295/GCA_000807295.1_ASM80729v1	-	CT14D4
Mycobacterium tuberculosis MD17888	1447480	PRJNA234593	234593	Terrabacteria group	Actinobacteria	4.42145	65.6	-	JLEZ01	99	4345	4137	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584631	GCA_000650535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/535/GCA_000650535.1_Myco_tube_MD17888_V1	-	MD17888
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.42915	32	-	JVVI01	106	2365	2266	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197260	GCA_001068995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/995/GCA_001068995.1_ASM106899v1	26230489	1289_SEPI
Bacillus cereus	1396	PRJNA270586	270586	Terrabacteria group	Firmicutes	5.21702	35.4	-	LCYJ01	76	5641	5379	5/18/15	3/26/17	Scaffold	University of Groningen	SAMN03267261	GCA_001008575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/575/GCA_001008575.1_ASM100857v1	26679589	B4078
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.06075	37.8	-	JOXY01	30	3132	3032	7/15/14	2/26/17	Contig	Cornell University	SAMN02741507	GCA_000726765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/765/GCA_000726765.1_ASM72676v1	-	FSL R8-5878
Yersinia pestis MGJZ12	755960	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.43896	47.9	-	ADSV01	1203	4228	3944	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403095	GCA_000325225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/225/GCA_000325225.1_ASM32522v1	23271803	MGJZ12
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.72761	30.3	-	CUHR01	25	1835	1705	3/31/15	3/18/17	Contig	SC	SAMEA1010400	GCA_001225385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/385/GCA_001225385.1_7038_3_11	-	OXC6260
Clostridium saccharobutylicum DSM 13864	1345695	PRJNA217481	217481	Terrabacteria group	Firmicutes	5.10781	28.7	chromosome:NC_022571.1/CP006721.1	-	1	4410	4146	10/18/13	4/2/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02603278	GCA_000473995.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/995/GCA_000473995.1_ASM47399v1	24285650	DSM 13864
Staphylococcus aureus M0438	1158531	PRJNA88971	88971	Terrabacteria group	Firmicutes	2.84156	32.8	-	AJCX01	5	2950	2792	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809184	GCA_000361165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/165/GCA_000361165.1_Stap_aure_M0438_V1	-	M0438
Staphylococcus aureus M0450	1157030	PRJNA88617	88617	Terrabacteria group	Firmicutes	2.90515	33	-	AIWQ01	7	3011	2835	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792156	GCA_000361185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/185/GCA_000361185.1_Stap_aure_M0450_V1	-	M0450
Clostridioides difficile M120	699035	PRJNA42467	42467	Terrabacteria group	Firmicutes	4.04773	28.7	chromosome:NC_017174.1/FN665653.1	-	1	3756	3505	3/24/10	3/15/17	Complete Genome	Wellcome Trust Sanger Institute	SAMEA3138368	GCA_000210435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/435/GCA_000210435.1_ASM21043v1	20368420	M120
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69379	30.4	-	CUVT01	20	1799	1700	3/31/15	3/18/17	Contig	SC	SAMEA1401580	GCA_001225405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/405/GCA_001225405.1_7213_3_88	-	OXC6633
Yersinia pestis MGJZ3	755961	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.45387	47.4	-	ADSW01	1187	4389	3969	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403096	GCA_000325245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/245/GCA_000325245.1_ASM32524v1	23271803	MGJZ3
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09526	37.9	-	JOYF01	18	3147	3046	7/15/14	2/26/17	Contig	Cornell University	SAMN02741514	GCA_000726775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/775/GCA_000726775.1_ASM72677v1	-	FSL R8-6045
Bacillus cereus	1396	PRJNA270586	270586	Terrabacteria group	Firmicutes	5.48206	35.5	-	LCYL01	101	5932	5591	5/18/15	3/26/17	Scaffold	University of Groningen	SAMN03267263	GCA_001008585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/585/GCA_001008585.1_ASM100858v1	26679589	B4086
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.67774	31.8	-	JWGA01	98	2666	2560	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03196982	GCA_001069075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/075/GCA_001069075.1_ASM106907v1	26230489	102_SEPI
Mycobacterium tuberculosis MD16577	1447483	PRJNA234596	234596	Terrabacteria group	Actinobacteria	4.38182	65.6	-	JLEX01	80	4316	4092	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584634	GCA_000650555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/555/GCA_000650555.1_Myco_tube_MD16577_V1	-	MD16577
Clostridioides difficile 2007855	699033	PRJNA42471	42471	Terrabacteria group	Firmicutes	4.17987	28.7	chromosome:FN665654.1	-	1	-	-	3/24/10	2/27/15	Complete Genome	Wellcome Trust Sanger Institute	SAMEA3138369	GCA_000210455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/455/GCA_000210455.1_ASM21045v1	-	2007855
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.01203	39.7	-	CNRH02	134	2229	2010	3/22/15	3/11/17	Contig	SC	SAMEA1032612	GCA_001082985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/985/GCA_001082985.2_6999_1_19	-	R34-3202
Helicobacter pylori Hp M9	992125	PRJNA64277	64277	Proteobacteria	delta/epsilon subdivisions	1.65893	39.2	-	AKQT01	10	1634	1485	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778882	GCA_000275485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/485/GCA_000275485.2_ASM27548v2	-	Hp M9
Neisseria meningitidis NM003	1190575	PRJNA166959	166959	Proteobacteria	Betaproteobacteria	2.19688	51.7	-	AVNQ01	129	2525	2150	8/19/13	3/21/17	Contig	IGS	SAMN01984860	GCA_000448125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/125/GCA_000448125.1_ASM44812v1	-	NM003
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.75134	38.4	-	LRHH01	16	1773	1690	5/6/16	3/28/17	Contig	Menzies School of Health Research	SAMN03988142	GCA_001638885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/885/GCA_001638885.1_ASM163888v1	-	SST2242-1
Leptospira interrogans serovar Copenhageni str. P2518	1049820	PRJNA74223	74223	Spirochaetes	Spirochaetia	4.54502	35	-	AHQO01	492	4089	3729	2/3/12	5/18/17	Scaffold	J. Craig Venter Institute	SAMN00739382	GCA_000246455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/455/GCA_000246455.2_CLC_glsol071	-	P2518
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.55561	66.2	-	JTNC01	123	6266	6053	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105741	GCA_000792045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/045/GCA_000792045.1_AZPAE15044	25367914	AZPAE15044
Acinetobacter baumannii WC-348	903919	PRJNA53437	53437	Proteobacteria	Gammaproteobacteria	4.10849	38.9	-	AMZT01	61	3964	3757	11/26/12	5/18/17	Contig	Walter Reed Army Institute of Research	SAMN00761224	GCA_000314635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/635/GCA_000314635.1_gacin31v1.0	-	WC-348
Streptococcus agalactiae GB01004	1154971	PRJNA86615	86615	Terrabacteria group	Firmicutes	2.06117	35.5	-	ANQN01	82	2106	1934	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN02436252	GCA_000322685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/685/GCA_000322685.1_ASM32268v1	-	GB01004
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.18173	41.1	-	CEEP01	150	2169	2010	2/14/15	3/17/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233935	GCA_000946915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/915/GCA_000946915.1_Velvet_assembly	-	LS6R
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.48643	38.3	-	FJCS01	36	3188	3056	2/20/16	3/27/17	Contig	SC	SAMEA2060122	GCA_900057745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/745/GCA_900057745.1_10771_1_77	-	2531STDY5467358
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.53932	50.7	-	CWTE01	363	5082	4301	7/16/15	2/24/17	Scaffold	SC	SAMEA3345029	GCA_001249025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/025/GCA_001249025.1_H14090035401	-	35401ss_1
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.07168	68.2	-	LWVQ01	158	7333	6808	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208580	GCA_001976645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/645/GCA_001976645.1_ASM197664v1	-	4179a
Vibrio cholerae	666	PRJNA242443	242443	Proteobacteria	Gammaproteobacteria	4.03449	47.4	-	JIDM01	152	3905	3706	7/31/14	3/24/17	Contig	Los Alamos National Laboratory	SAMN02693890	GCA_000736925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/925/GCA_000736925.1_GFC_12	25212618	981-75
Clostridioides difficile	1496	PRJNA329109	329109	Terrabacteria group	Firmicutes	4.45922	28.6	-	MTVT01	62	4185	3732	1/26/17	3/22/17	Contig	Broad Institute	SAMN05504801	GCA_001971825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/825/GCA_001971825.1_ASM197182v1	-	20110869
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.09728	45.3	-	JNTX02	33	4911	4698	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741349	GCA_000706825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/825/GCA_000706825.2_ASM70682v2	"2,510,376,428,330,880"	CFSAN001612
Klebsiella pneumoniae CHS 24	1438730	PRJNA234193	234193	Proteobacteria	Gammaproteobacteria	5.49236	57.3	-	JMWY01	14	5514	5272	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581326	GCA_000693455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/455/GCA_000693455.1_Kleb_pneu_CHS_24_V1	-	CHS 24
Enterococcus faecalis EnGen0217	1157403	PRJNA88439	88439	Terrabacteria group	Firmicutes	3.30573	37.1	-	AIRO01	35	3492	3307	5/3/13	4/10/17	Scaffold	Broad Institute	SAMN00808898	GCA_000396485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/485/GCA_000396485.1_Ente_faec_B4259_V1	-	B4259
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.11646	52.4	-	MBBI01	187	2461	2145	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04852989	GCA_001859135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/135/GCA_001859135.1_ASM185913v1	-	USO_DK11-24
Enterococcus faecium	1352	PRJNA329509	329509	Terrabacteria group	Firmicutes	2.97945	37.8	-	MSHW01	421	3088	2865	5/22/17	5/31/17	Scaffold	Intermountain Healthcare	SAMN05413851	GCA_002158385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/158/385/GCA_002158385.1_ASM215838v1	-	IHC6
Borrelia miyamotoi LB-2001	1302858	PRJNA192621	192621	Spirochaetes	Spirochaetia	0.937966	28.6967	chromosome:NC_022079.2/CP006647.2; plasmid lpB:NZ_CP010328.2/CP010328.2	-	2	872	800	8/12/13	4/11/17	Complete Genome	University of California Irvine	SAMN02604147	GCA_000445425.4	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/445/425/GCA_000445425.4_ASM44542v4	24029760	LB-2001
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.24739	60	-	FCHU01	30	4997	4830	1/21/16	3/27/17	Scaffold	SC	SAMEA2273940	GCA_001539845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/845/GCA_001539845.1_12082_2_73	-	2880STDY5682867
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.74015	31.1	-	FBEM01	30	1835	1688	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683181	GCA_001488735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/735/GCA_001488735.1_SS_2283	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.66081	55.7	-	FJXV01	19	4501	4341	4/5/16	3/28/17	Scaffold	SC	SAMEA2273370	GCA_900075375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/375/GCA_900075375.1_11983_6_51	-	e1272
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.04509	64.2	-	FSCI01	36	5041	4896	12/14/16	3/21/17	Contig	SC	SAMEA2068815	GCA_900132865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/865/GCA_900132865.1_10665_4_84	-	339
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.66417	66.9	-	MEAW01	171	7107	6458	11/18/16	6/28/17	Scaffold	Menzies School of Health Research	SAMN05712666	GCA_001882385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/385/GCA_001882385.1_ASM188238v1	-	MSMB0108
Pseudomonas sp. SID14000	1986221	PRJNA385834	385834	Proteobacteria	Gammaproteobacteria	5.41246	62.7	-	NFZQ01	206	4952	4766	6/2/17	6/5/17	Contig	UW-Madison	SAMN06917020	GCA_002165135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/135/GCA_002165135.1_ASM216513v1	-	SID14000
Streptomyces sp. NRRL F-4489	1609095	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.52406	73.3	-	LLZI01	297	6758	6389	1/8/16	3/12/17	Contig	University of Illinois	SAMN03327485	GCA_001509485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/485/GCA_001509485.1_ASM150948v1	-	NRRL F-4489
Streptomyces sp. NRRL S-1521	1609100	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.5418	72.2	-	LLZK01	282	7412	6965	1/8/16	3/13/17	Contig	University of Illinois	SAMN03327493	GCA_001509505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/505/GCA_001509505.1_ASM150950v1	-	NRRL S-1521
Pseudomonas sp. PE-S1G-1	1986995	PRJNA385617	385617	Proteobacteria	Gammaproteobacteria	7.03501	61.1	-	NGUS01	137	6510	6265	6/8/17	6/10/17	Contig	Washington University in Saint Louis	SAMN06915398	GCA_002179905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/905/GCA_002179905.1_ASM217990v1	-	PE-S1G-1
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.51889	67.2	-	MEAU01	99	6892	6460	11/18/16	6/28/17	Scaffold	Menzies School of Health Research	SAMN05712664	GCA_001882395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/395/GCA_001882395.1_ASM188239v1	-	MSMB0103
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.06831	54.9	-	JVZC01	115	5005	4775	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197162	GCA_001052955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/955/GCA_001052955.1_ASM105295v1	26230489	1200_ECLO
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96408	64.2	-	FSCU01	17	4906	4761	12/14/16	3/21/17	Contig	SC	SAMEA2070773	GCA_900133205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/205/GCA_900133205.1_10250_1_25	-	365
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.16586	54.7	-	FJWQ01	105	5140	4873	4/5/16	3/28/17	Scaffold	SC	SAMEA2273298	GCA_900075385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/385/GCA_900075385.1_11983_7_74	-	e1155
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66079	31.4	-	FBAE01	22	1728	1629	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683075	GCA_001488755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/755/GCA_001488755.1_EC3533	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.36743	59.8	-	FCIT01	26	5149	4972	1/21/16	3/27/17	Scaffold	SC	SAMEA2273976	GCA_001539865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/865/GCA_001539865.1_12082_3_11	-	2880STDY5682903
Clostridium butyricum	1492	PRJNA301981	301981	Terrabacteria group	Firmicutes	4.63991	28.6898	chromosome:NZ_CP013239.1/CP013239.1; plasmid pNPD4_1:NZ_CP013240.1/CP013240.1; plasmid pNPD4_2:NZ_CP013238.1/CP013238.1	-	3	4174	3983	11/28/16	4/5/17	Complete Genome	Los Alamos National Laboratory	SAMN04262337	GCA_001886875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/875/GCA_001886875.1_ASM188687v1	-	CDC_51208
Enterococcus faecium	1352	PRJNA329509	329509	Terrabacteria group	Firmicutes	2.96583	37.9	-	MSIA01	328	3090	2881	5/22/17	5/31/17	Scaffold	Intermountain Healthcare	SAMN05413855	GCA_002158435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/158/435/GCA_002158435.1_ASM215843v1	-	IHC10
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.13408	52.4	-	MBBJ01	177	2470	2148	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04852990	GCA_001859165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/165/GCA_001859165.1_ASM185916v1	-	USO_DK11-27
Enterococcus faecalis EnGen0218	1157404	PRJNA88441	88441	Terrabacteria group	Firmicutes	3.28772	37.1	-	AIRP01	39	3473	3296	5/3/13	3/24/17	Scaffold	Broad Institute	SAMN00808899	GCA_000396505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/505/GCA_000396505.1_Ente_faec_B4267_V1	-	B4267
Klebsiella pneumoniae CHS 25	1438731	PRJNA234194	234194	Proteobacteria	Gammaproteobacteria	5.85873	56.9	-	JMWZ01	11	5963	5678	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581327	GCA_000693475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/475/GCA_000693475.1_Kleb_pneu_CHS_25_V1	-	CHS 25
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.14639	45.2	-	JNTQ02	60	4940	4740	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741363	GCA_000706845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/845/GCA_000706845.2_ASM70684v2	"2,510,376,428,330,880"	CFSAN006134
Clostridioides difficile	1496	PRJNA329109	329109	Terrabacteria group	Firmicutes	4.18995	28.8	-	MTVP01	5	3885	3676	1/26/17	3/22/17	Contig	Broad Institute	SAMN05504799	GCA_001971835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/835/GCA_001971835.1_ASM197183v1	-	20100211
Vibrio cholerae	666	PRJNA242443	242443	Proteobacteria	Gammaproteobacteria	4.0748	47.6	-	JIDN01	82	3870	3670	7/31/14	3/24/17	Contig	Los Alamos National Laboratory	SAMN02693891	GCA_000736935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/935/GCA_000736935.1_GFC_13	25212618	Aug-76
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.08348	68.2	-	LWVN01	146	7324	6783	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208577	GCA_001976655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/655/GCA_001976655.1_ASM197665v1	-	4166a
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.64183	51	-	CXCT01	416	4944	4360	7/16/15	2/24/17	Scaffold	SC	SAMEA954690	GCA_001249045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/045/GCA_001249045.1_5236_5_8	-	Sh54190_440884
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.3514	38.2	-	FJDO01	34	3066	2922	2/20/16	3/27/17	Contig	SC	SAMEA2064368	GCA_900057755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/755/GCA_900057755.1_10771_3_22	-	2531STDY5467399
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.29128	41.2	-	CEDH01	172	2247	2105	2/14/15	3/17/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233890	GCA_000946935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/935/GCA_000946935.1_Velvet_assembly	-	LS0X
Streptococcus agalactiae MRI Z1-203	1154840	PRJNA86339	86339	Terrabacteria group	Firmicutes	2.02515	35.4	-	ANQJ01	20	2080	1961	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN02436258	GCA_000322705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/705/GCA_000322705.1_ASM32270v1	-	MRI Z1-203
Acinetobacter baumannii Naval-113	903920	PRJNA53439	53439	Proteobacteria	Gammaproteobacteria	4.09563	39.2	-	AMZU01	130	4000	3775	11/26/12	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00761225	GCA_000314655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/655/GCA_000314655.1_gacin32v1.0	-	Naval-113
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.86092	66	-	JTNR01	89	6565	6378	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105726	GCA_000792145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/145/GCA_000792145.1_AZPAE15029	25367914	AZPAE15029
Leptospira interrogans serovar Icterohaemorrhagiae str. P2422	1049907	PRJNA74225	74225	Spirochaetes	Spirochaetia	4.53002	35	-	AHQP01	412	4054	3701	2/3/12	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00739388	GCA_000246475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/475/GCA_000246475.2_CLC_glsol073	-	P2422
Streptococcus pyogenes	1314	PRJNA310856	310856	Terrabacteria group	Firmicutes	1.81203	38.3	-	LVYQ01	19	1842	1756	5/11/16	3/28/17	Contig	University of Camerino	SAMN04457850	GCA_001642125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/125/GCA_001642125.1_ASM164212v1	-	157
Neisseria meningitidis NM1476	1190576	PRJNA166961	166961	Proteobacteria	Betaproteobacteria	2.26171	51.8	-	AVNR01	140	2568	2201	8/19/13	3/21/17	Contig	IGS	SAMN01984861	GCA_000448145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/145/GCA_000448145.1_ASM44814v1	-	NM1476
Helicobacter pylori Hp P-2b	992099	PRJNA64225	64225	Proteobacteria	delta/epsilon subdivisions	1.70934	39	-	AKQB01	6	1659	1505	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778870	GCA_000275505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/505/GCA_000275505.2_ASM27550v2	-	Hp P-2b
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.1403	39.6	-	CMAO01	49	2325	2115	3/21/15	3/11/17	Contig	SC	SAMEA1028621	GCA_001083025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/025/GCA_001083025.1_7004_5_7	-	SMRU2863
Clostridium butyricum	1492	PRJNA314015	314015	Terrabacteria group	Firmicutes	4.5972	28.6285	chromosome 1:NZ_CP014704.1/CP014704.1; chromosome 2:NZ_CP014705.1/CP014705.1; plasmid unnamed:NZ_CP014706.1/CP014706.1	-	3	4090	3926	5/18/16	4/5/17	Complete Genome	SRM University	SAMN04527051	GCA_001646605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/646/605/GCA_001646605.1_ASM164660v1	-	TOA
Mycobacterium tuberculosis MD16277	1447484	PRJNA234597	234597	Terrabacteria group	Actinobacteria	4.42203	65.6	-	JLEW01	106	4358	4142	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584635	GCA_000650575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/575/GCA_000650575.1_Myco_tube_MD16277_V1	-	MD16277
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.6069	31.9	-	JWFX01	151	2568	2474	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03196985	GCA_001069095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/095/GCA_001069095.1_ASM106909v1	26230489	1021.rep2_SEPI
Bacillus cereus	1396	PRJNA270586	270586	Terrabacteria group	Firmicutes	6.23709	34.6	-	LCYK01	89	6513	6056	5/18/15	3/26/17	Scaffold	University of Groningen	SAMN03267262	GCA_001008595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/595/GCA_001008595.1_ASM100859v1	26679589	B4080
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09487	37.9	-	JOYD01	20	3131	3045	7/15/14	2/26/17	Contig	Cornell University	SAMN02741512	GCA_000726805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/805/GCA_000726805.1_ASM72680v1	-	FSL R8-6036
Yersinia pestis MGJZ6	755962	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.36807	47.9	-	ADSX01	1016	4174	3916	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403097	GCA_000325265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/265/GCA_000325265.1_ASM32526v1	23271803	MGJZ6
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.71076	30.4	-	CUKC01	14	1835	1688	3/31/15	3/18/17	Contig	SC	SAMEA1010563	GCA_001225465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/465/GCA_001225465.1_7038_3_69	-	OXC6319
Clostridioides difficile	1496	PRJNA393704	393704	Terrabacteria group	Firmicutes	4.08713	28.6	chromosome:NZ_CP022524.1/CP022524.1	-	1	3743	3551	7/27/17	8/1/17	Complete Genome	Northwestern University	SAMN07339707	GCA_002234355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/234/355/GCA_002234355.1_ASM223435v1	-	DH/NAP11/106/ST-42
Staphylococcus aureus M0455	1224931	PRJNA173479	173479	Terrabacteria group	Firmicutes	2.75766	32.9	-	ANZV01	3	2836	2677	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN01125844	GCA_000361205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/205/GCA_000361205.1_Stap_aure_M0455_V1	-	M0455
Staphylococcus aureus M0460	1224932	PRJNA173480	173480	Terrabacteria group	Firmicutes	2.88721	32.9	-	ANZW01	7	3018	2846	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN01125845	GCA_000361225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/225/GCA_000361225.1_Stap_aure_M0460_V1	-	M0460
Candidatus Mycoplasma girerdii	1318617	PRJNA362245	362245	Terrabacteria group	Tenericutes	0.629409	28.6	chromosome:CP020122.1	-	1	609	563	7/6/17	7/11/17	Complete Genome	"Relman Lab, Stanford University School of Medicine"	SAMN06236793	GCA_002215425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/425/GCA_002215425.1_ASM221542v1	-	-
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69462	30.5	-	CUMF01	19	1773	1671	3/31/15	3/18/17	Contig	SC	SAMEA1010316	GCA_001225565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/565/GCA_001225565.1_7065_7_31	-	OXC6377
Yersinia pestis MGJZ7	755963	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.36591	47.9	-	ADSY01	1325	4197	3874	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403098	GCA_000325285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/285/GCA_000325285.1_ASM32528v1	23271803	MGJZ7
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.06148	37.8	-	JOYB01	29	3134	3033	7/15/14	2/26/17	Contig	Cornell University	SAMN02741510	GCA_000726815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/815/GCA_000726815.1_ASM72681v1	-	FSL R8-6024
Bacillus cereus	1396	PRJNA270586	270586	Terrabacteria group	Firmicutes	5.57113	35.1	-	LCYM01	70	5995	5679	5/18/15	3/26/17	Scaffold	University of Groningen	SAMN03267264	GCA_001008645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/645/GCA_001008645.1_ASM100864v1	26679589	B4087
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.51834	31.8	-	JWCC01	102	2467	2370	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197084	GCA_001069215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/215/GCA_001069215.1_ASM106921v1	26230489	1130_SEPI
Mycobacterium tuberculosis MD16553	1447485	PRJNA234598	234598	Terrabacteria group	Actinobacteria	4.41344	65.6	-	JLEV01	81	4334	4137	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584636	GCA_000650595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/595/GCA_000650595.1_Myco_tube_MD16553_V1	-	MD16553
Campylobacter volucris LMG 24379	580033	PRJNA66783	66783	Proteobacteria	delta/epsilon subdivisions	1.51795	28.6	chromosome:NZ_CP007774.1/CP007774.1	-	1	1568	1488	1/7/15	4/17/17	Complete Genome	"USDA, ARS, WRRC"	SAMN03248550	GCA_000816345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/345/GCA_000816345.1_ASM81634v1	25381664	LMG 24379
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06238	39.6	-	COCE02	187	2211	2008	3/23/15	3/11/17	Contig	SC	SAMEA1463014	GCA_001083045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/045/GCA_001083045.2_7622_3_64	-	CH2079
Helicobacter pylori Hp P-3b	992100	PRJNA64227	64227	Proteobacteria	delta/epsilon subdivisions	1.65733	39.2	-	AKQC01	8	1615	1462	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778903	GCA_000275525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/525/GCA_000275525.2_ASM27552v2	-	Hp P-3b
Neisseria meningitidis NM0552	1190577	PRJNA166963	166963	Proteobacteria	Betaproteobacteria	2.26016	51.5	-	AVNS01	127	2664	2226	8/19/13	3/21/17	Contig	IGS	SAMN01984862	GCA_000448165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/165/GCA_000448165.1_ASM44816v1	-	NM0552
Streptococcus pyogenes	1314	PRJNA310856	310856	Terrabacteria group	Firmicutes	1.94709	38.3	-	LVYN01	188	1989	1814	5/11/16	3/28/17	Contig	University of Camerino	SAMN04457490	GCA_001642135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/135/GCA_001642135.1_ASM164213v1	-	154
Leptospira interrogans serovar Icterohaemorrhagiae str. P2554	1049909	PRJNA74227	74227	Spirochaetes	Spirochaetia	4.54709	35	-	AHQQ01	471	4103	3714	2/3/12	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00739383	GCA_000246495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/495/GCA_000246495.2_CLC_glsol074	-	P2554
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.7513	66	-	JTPP01	125	6471	6238	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105676	GCA_000792205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/205/GCA_000792205.1_AZPAE14979	25367914	AZPAE14979
Acinetobacter baumannii 53264	1216295	PRJNA171521	171521	Proteobacteria	Gammaproteobacteria	3.97659	38.9	-	ALPW01	130	3874	3717	1/24/13	3/15/17	Contig	SCELSE	SAMN02470882	GCA_000332855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/855/GCA_000332855.1_AB53264	23538992	53264
Streptococcus agalactiae MRI Z1-206	1154843	PRJNA86345	86345	Terrabacteria group	Firmicutes	2.06187	35.3	-	ANQG01	22	2118	2015	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN02436211	GCA_000322725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/725/GCA_000322725.1_ASM32272v1	-	MRI Z1-206
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.16588	41	-	CEIQ01	85	2152	1990	2/18/15	3/17/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234010	GCA_000947055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/055/GCA_000947055.1_Velvet_assembly	-	S14K
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.44592	38.3	-	FJGN01	25	3156	3043	2/20/16	3/27/17	Contig	SC	SAMEA2077528	GCA_900057765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/765/GCA_900057765.1_10625_2_19	-	2532STDY5467492
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.35763	50.8	-	CXDT01	379	4644	4138	7/16/15	2/24/17	Scaffold	SC	SAMEA954746	GCA_001249065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/065/GCA_001249065.1_5236_8_9	-	Sh32222_441097
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.06189	68.2	-	LWVM01	388	7348	6608	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208576	GCA_001976675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/675/GCA_001976675.1_ASM197667v1	-	4263b
Vibrio cholerae	666	PRJNA242443	242443	Proteobacteria	Gammaproteobacteria	4.29105	46.9	-	JIDO01	117	4199	4005	7/31/14	3/24/17	Contig	Los Alamos National Laboratory	SAMN02693881	GCA_000736945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/945/GCA_000736945.1_GFC_16	25212618	571-88
Clostridioides difficile	1496	PRJNA329109	329109	Terrabacteria group	Firmicutes	4.20151	28.7	-	MTVQ01	4	3914	3694	1/26/17	3/22/17	Contig	Broad Institute	SAMN05504798	GCA_001971865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/865/GCA_001971865.1_ASM197186v1	-	20100502
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.09013	45.3	-	JNTR02	51	4900	4687	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741364	GCA_000706865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/865/GCA_000706865.2_ASM70686v2	"2,510,376,428,330,880"	CFSAN006135
Klebsiella pneumoniae CHS 26	1438732	PRJNA234195	234195	Proteobacteria	Gammaproteobacteria	5.87347	56.9	-	JMXA01	15	5974	5691	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581328	GCA_000693495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/495/GCA_000693495.1_Kleb_pneu_CHS_26_V1	-	CHS 26
Enterococcus faecalis EnGen0219	1157405	PRJNA88443	88443	Terrabacteria group	Firmicutes	3.29298	37.1	-	AIRQ01	41	3466	3302	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00808900	GCA_000396525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/525/GCA_000396525.1_Ente_faec_B4270_V1	-	B4270
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.11469	52.4	-	MBBK01	130	2468	2139	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04852991	GCA_001859185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/185/GCA_001859185.1_ASM185918v1	-	USO_IE11027
Enterococcus faecium	1352	PRJNA329509	329509	Terrabacteria group	Firmicutes	2.95341	37.6	-	MSIC01	363	3121	2910	5/22/17	5/31/17	Scaffold	Intermountain Healthcare	SAMN05413857	GCA_002158445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/158/445/GCA_002158445.1_ASM215844v1	-	IHC12
Parvimonas micra	33033	PRJNA264589	264589	Terrabacteria group	Firmicutes	1.62701	28.6	chromosome:NZ_CP009761.1/CP009761.1	-	1	1531	1438	12/9/14	4/9/17	Complete Genome	Chosun University	SAMN03135876	GCA_000800295.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/295/GCA_000800295.1_ASM80029v1	-	KCOM 1535; ChDC B708
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.20291	60	-	FCHT01	21	4918	4757	1/21/16	3/27/17	Scaffold	SC	SAMEA2273938	GCA_001539885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/885/GCA_001539885.1_12082_2_71	-	2880STDY5682865
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.79514	31	-	FBAG01	54	1863	1739	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683079	GCA_001488775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/775/GCA_001488775.1_H103060185	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.49941	55.4	-	FJWC01	32	4342	4155	4/5/16	3/28/17	Scaffold	SC	SAMEA2273497	GCA_900075395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/395/GCA_900075395.1_12082_4_62	-	e1202
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16209	64.2	-	FSCV01	23	5163	5022	12/14/16	3/21/17	Contig	SC	SAMEA2071453	GCA_900133225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/225/GCA_900133225.1_10250_1_27	-	367
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.95639	55.4	-	JVUJ01	607	4993	4534	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197285	GCA_001053345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/345/GCA_001053345.1_ASM105334v1	26230489	1309_ECLO
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.37362	67.3	-	MEAY01	57	6693	6300	11/18/16	6/28/17	Scaffold	Menzies School of Health Research	SAMN05712668	GCA_001882425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/425/GCA_001882425.1_ASM188242v1	-	MSMB0116
Pseudomonas sp. A46	1973009	PRJNA380843	380843	Proteobacteria	Gammaproteobacteria	6.77713	64.7	-	NBMS01	125	6426	6216	6/16/17	6/21/17	Contig	National Central University	SAMN06463607	GCA_002196875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/875/GCA_002196875.1_ASM219687v1	-	A46
Streptomyces sp. NRRL WC-3604	1609102	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.58545	72.2	-	LLZM01	144	6965	6647	1/8/16	3/12/17	Contig	University of Illinois	SAMN03327496	GCA_001509785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/785/GCA_001509785.1_ASM150978v1	-	NRRL WC-3604
Streptomyces sp. NRRL WC-3605	1609103	PRJNA238534	238534	Terrabacteria group	Actinobacteria	7.58459	72.2	-	LLZN01	137	6970	6661	1/8/16	3/12/17	Contig	University of Illinois	SAMN03327497	GCA_001509795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/795/GCA_001509795.1_ASM150979v1	-	NRRL WC-3605
Pseudomonas sp. K2I15	2013577	PRJNA390572	390572	Proteobacteria	Gammaproteobacteria	6.63701	60.4	-	NIXO01	140	6150	5963	6/21/17	6/24/17	Contig	University of Copenhagen	SAMN07244154	GCA_002204795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/795/GCA_002204795.1_Pseudomonas_sp	-	K2I15
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.35813	67.3	-	MEBC01	60	6646	6257	11/18/16	6/28/17	Scaffold	Menzies School of Health Research	SAMN05712672	GCA_001882435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/435/GCA_001882435.1_ASM188243v1	-	MSMB0170
Enterobacter hormaechei subsp. oharae	301102	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.10434	55	-	JVZA01	263	5056	4765	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197164	GCA_001054075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/075/GCA_001054075.1_ASM105407v1	26230489	1202_ECLO
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.86369	64.3	-	FVGY01	13	4837	4702	3/10/17	3/18/17	Contig	SC	SAMEA2070774	GCA_900133235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/235/GCA_900133235.1_10250_1_28	-	368
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.12401	55	-	FJXH01	55	5082	4832	4/5/16	3/28/17	Scaffold	SC	SAMEA2273311	GCA_900075405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/405/GCA_900075405.1_11983_7_87	-	e1234
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.6606	31.4	-	FAZY01	26	1724	1630	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683065	GCA_001488795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/795/GCA_001488795.1_H112160324	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.07451	60.1	-	FCKL01	16	4822	4670	1/21/16	3/27/17	Scaffold	SC	SAMEA2274033	GCA_001539905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/905/GCA_001539905.1_12082_3_58	-	2880STDY5682961
Candidatus Mycoplasma girerdii	1318617	PRJNA196996	196996	Terrabacteria group	Tenericutes	0.618983	28.6	chromosome:CP007711.1	-	1	611	572	10/31/14	11/6/14	Complete Genome	Virginia Commonwealth University	SAMN02795945	GCA_000770195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/195/GCA_000770195.1_ASM77019v1	-	VCU_M1
Enterococcus faecium C68	565664	PRJNA34867	34867	Terrabacteria group	Firmicutes	2.95711	38.1	-	ACJQ02	14	3074	2867	9/15/09	3/24/17	Contig	Broad Institute	SAMN02595312	GCA_000160315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/160/315/GCA_000160315.2_EFCM_C68_V3	-	C68
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.06	52.6	-	MBBL01	143	2416	2079	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04852992	GCA_001859205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/205/GCA_001859205.1_ASM185920v1	-	USO_IE11068
Enterococcus faecalis EnGen0220	1157406	PRJNA88445	88445	Terrabacteria group	Firmicutes	3.31955	37	-	AIRR01	45	3526	3353	5/3/13	4/10/17	Scaffold	Broad Institute	SAMN00808901	GCA_000396545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/545/GCA_000396545.1_Ente_faec_B4411_V1	-	B4411
Klebsiella pneumoniae CHS 27	1438733	PRJNA234196	234196	Proteobacteria	Gammaproteobacteria	5.90305	56.9	-	JMXB01	16	5957	5663	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581329	GCA_000693515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/515/GCA_000693515.1_Kleb_pneu_CHS_27_V1	-	CHS 27
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.15077	45.2	-	JNST02	44	4993	4808	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741372	GCA_000706885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/885/GCA_000706885.2_ASM70688v2	"2,510,376,428,330,880"	CFSAN007436
Clostridioides difficile	1496	PRJNA329109	329109	Terrabacteria group	Firmicutes	4.32436	28.9	-	MTVU01	3	4056	3839	1/26/17	3/21/17	Contig	Broad Institute	SAMN05504807	GCA_001971875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/875/GCA_001971875.1_ASM197187v1	-	20110960
Vibrio cholerae	666	PRJNA242443	242443	Proteobacteria	Gammaproteobacteria	4.03346	47.5	-	JMBO01	129	3861	3674	7/31/14	3/24/17	Contig	Los Alamos National Laboratory	SAMN02693884	GCA_000737005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/005/GCA_000737005.1_GFC_19	25212618	234-93
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.07641	68.2	-	LWVP01	168	7360	6815	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208579	GCA_001976685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/685/GCA_001976685.1_ASM197668v1	-	4175a
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.65771	50.5	-	CXAN01	414	5184	4408	7/17/15	2/24/17	Scaffold	SC	SAMEA2445772	GCA_001249115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/115/GCA_001249115.1_12971_8_80	-	H135060466
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.44579	38.3	-	FJGO01	21	3153	3044	2/20/16	3/27/17	Contig	SC	SAMEA2080609	GCA_900057775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/775/GCA_900057775.1_10625_2_20	-	2532STDY5467493
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.42688	41.1	-	CEFG01	356	2422	2226	2/14/15	3/17/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233924	GCA_000947235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/235/GCA_000947235.1_Velvet_assembly	-	LS4X
Streptococcus agalactiae FSL S3-062	1154774	PRJNA86137	86137	Terrabacteria group	Firmicutes	2.12085	35.5	-	ANQF01	108	2300	2072	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN02436305	GCA_000322745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/745/GCA_000322745.1_ASM32274v1	-	FSL S3-062
Acinetobacter baumannii ABIsac_ColiS	1200350	PRJEB98	185027	Proteobacteria	Gammaproteobacteria	3.77187	39	-	CAKA01	275	3731	3420	1/3/13	3/15/17	Contig	Seydina	SAMEA2272114	GCA_000333715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/715/GCA_000333715.1_ASM33371v1	23070160	-
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.83455	65.7	-	JTNS01	141	6493	6223	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105725	GCA_000792265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/265/GCA_000792265.1_AZPAE15028	25367914	AZPAE15028
Leptospira interrogans serovar Icterohaemorrhagiae str. P2547	1049908	PRJNA74229	74229	Spirochaetes	Spirochaetia	4.54726	35	-	AHQR01	462	4060	3726	2/3/12	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00739384	GCA_000246515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/515/GCA_000246515.2_CLC_glsol075	-	P2547
Streptococcus pyogenes	1314	PRJNA310856	310856	Terrabacteria group	Firmicutes	1.70933	38.4	-	LVYM01	15	1678	1598	5/11/16	3/28/17	Contig	University of Camerino	SAMN04456660	GCA_001642145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/145/GCA_001642145.1_ASM164214v1	-	153
Neisseria meningitidis NM518	1190578	PRJNA166965	166965	Proteobacteria	Betaproteobacteria	2.23741	51.8	-	AVNT01	135	2542	2178	8/19/13	3/21/17	Contig	IGS	SAMN01984863	GCA_000448185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/185/GCA_000448185.1_ASM44818v1	-	NM518
Helicobacter pylori Hp M4	992120	PRJNA64267	64267	Proteobacteria	delta/epsilon subdivisions	1.66638	39.2	-	AKQQ01	9	1643	1478	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778919	GCA_000275545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/545/GCA_000275545.2_ASM27554v2	-	Hp M4
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.04328	39.7	-	CMIX01	56	2249	2018	3/22/15	3/11/17	Contig	SC	SAMEA1029233	GCA_001083145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/145/GCA_001083145.1_7038_7_19	-	SMRU3019
Borrelia burgdorferi CA382	1328311	PRJNA200089	200089	Spirochaetes	Spirochaetia	0.910736	28.6	chromosome:NC_022048.1/CP005925.1	-	1	864	803	8/6/13	4/1/17	Complete Genome	University of California Irvine	SAMN02604148	GCA_000444465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/465/GCA_000444465.1_ASM44446v1	-	CA382
Mycobacterium tuberculosis MD15766	1447486	PRJNA234599	234599	Terrabacteria group	Actinobacteria	4.42607	65.6	-	JLEU01	91	4345	4137	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584637	GCA_000650615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/615/GCA_000650615.1_Myco_tube_MD15766_V1	-	MD15766
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.48765	31.8	-	JWBN01	149	2432	2349	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197099	GCA_001069245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/245/GCA_001069245.1_ASM106924v1	26230489	1143_SEPI
Bacillus cereus	1396	PRJNA270586	270586	Terrabacteria group	Firmicutes	5.74946	35.1	-	LCYN01	41	6094	5681	5/18/15	3/26/17	Scaffold	University of Groningen	SAMN03267265	GCA_001008655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/655/GCA_001008655.1_ASM100865v1	26679589	B4147
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.1054	37.8	-	JOYE01	29	3200	3089	7/15/14	2/26/17	Contig	Cornell University	SAMN02741513	GCA_000726845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/845/GCA_000726845.1_ASM72684v1	-	FSL R8-6037
Yersinia pestis MGJZ9	755964	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.47493	47.9	-	ADSZ01	1082	4287	3984	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403099	GCA_000325305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/305/GCA_000325305.1_ASM32530v1	23271803	MGJZ9
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.7306	30.3	-	CUTF01	15	1833	1707	3/31/15	3/18/17	Contig	SC	SAMEA1401011	GCA_001225645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/645/GCA_001225645.1_7213_3_23	-	OXC6566
alpha proteobacterium HIMB5	859653	PRJNA50099	50099	Proteobacteria	Alphaproteobacteria	1.3432	28.6	chromosome:NC_018643.1/CP003809.1	-	1	1437	1383	9/24/12	9/4/17	Complete Genome	Gordon and Betty Moore Foundation Marine Microbiology Initiative	SAMN00016662	GCA_000299095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/095/GCA_000299095.1_ASM29909v1	-	HIMB5
Staphylococcus aureus M0467	1157031	PRJNA88619	88619	Terrabacteria group	Firmicutes	2.84905	32.9	-	AIWR01	6	2982	2820	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792157	GCA_000361245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/245/GCA_000361245.1_Stap_aure_M0467_V1	-	M0467
Staphylococcus aureus M0468	1157032	PRJNA88621	88621	Terrabacteria group	Firmicutes	2.99718	32.9	-	AIWS01	5	3156	2988	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00792158	GCA_000361265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/265/GCA_000361265.1_Stap_aure_M0468_V1	-	M0468
Methanococcus voltae A3	456320	PRJNA20131	20131	Euryarchaeota	Methanococci	1.93639	28.6	chromosome:NC_014222.1/CP002057.1	-	1	1741	1688	6/3/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00000040	GCA_000006175.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/006/175/GCA_000006175.2_ASM617v2	-	A3
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.6948	30.3	-	CURA01	9	1795	1687	3/31/15	3/18/17	Contig	SC	SAMEA1010458	GCA_001225685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/685/GCA_001225685.1_7092_1_6	-	OXC6453
Yersinia pestis SHAN11	755965	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.38446	47.9	-	ADTA01	1173	4156	3862	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403100	GCA_000325325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/325/GCA_000325325.1_ASM32532v1	23271803	SHAN11
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.1249	37.9	-	JOXQ01	28	3182	3062	7/15/14	2/26/17	Contig	Cornell University	SAMN02741499	GCA_000726865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/865/GCA_000726865.1_ASM72686v1	-	FSL R8-5786
Bacillus cereus	1396	PRJNA270586	270586	Terrabacteria group	Firmicutes	6.15949	34.9	-	LCYP01	312	6616	5897	5/18/15	3/26/17	Scaffold	University of Groningen	SAMN03267267	GCA_001008665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/665/GCA_001008665.1_ASM100866v1	26679589	B4158
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.42521	32	-	JWBM01	111	2357	2261	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197100	GCA_001069275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/275/GCA_001069275.1_ASM106927v1	26230489	1144_SEPI
Mycobacterium tuberculosis MD15974	1447487	PRJNA234600	234600	Terrabacteria group	Actinobacteria	4.42951	65.6	-	JLET01	80	4358	4141	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584638	GCA_000650635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/635/GCA_000650635.1_Myco_tube_MD15974_V1	-	MD15974
Clostridioides difficile CD196	645462	PRJNA38037	38037	Terrabacteria group	Firmicutes	4.11055	28.6	chromosome:NC_013315.1/FN538970.1	-	1	3807	3615	10/1/09	5/18/17	Complete Genome	Wellcome Trust Sanger Institute	SAMEA3138290	GCA_000085225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/085/225/GCA_000085225.1_ASM8522v1	19781061	CD196
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07498	39.5	-	CNYV02	245	2219	2022	3/22/15	3/11/17	Contig	SC	SAMEA1463134	GCA_001083265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/265/GCA_001083265.2_7553_4_47	-	NP7066
Helicobacter pylori Hp H-24c	992095	PRJNA64217	64217	Proteobacteria	delta/epsilon subdivisions	1.66844	39.2	-	AKPZ01	8	1644	1485	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778878	GCA_000275565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/565/GCA_000275565.2_ASM27556v2	-	Hp H-24c
Neisseria meningitidis NM3173	1190579	PRJNA166967	166967	Proteobacteria	Betaproteobacteria	2.20496	51.7	-	AVNU01	134	2530	2170	8/19/13	3/15/17	Contig	IGS	SAMN01984864	GCA_000448205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/205/GCA_000448205.1_ASM44820v1	-	NM3173
Streptococcus pyogenes	1314	PRJNA310856	310856	Terrabacteria group	Firmicutes	1.70669	38.4	-	LVYR01	29	1696	1597	5/11/16	3/28/17	Contig	University of Camerino	SAMN04457851	GCA_001642165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/165/GCA_001642165.1_ASM164216v1	-	158
Leptospira interrogans serovar Bim str. P2529	1049814	PRJNA74231	74231	Spirochaetes	Spirochaetia	4.83788	35	-	AHQS01	957	4550	4051	2/3/12	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00739385	GCA_000246535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/535/GCA_000246535.2_CLC_glsol076	-	P2529
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.08265	65.8	-	JTPL01	96	6823	6589	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105680	GCA_000792305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/305/GCA_000792305.1_AZPAE14983	25367914	AZPAE14983
Acinetobacter baumannii ABIsac_ColiR	1200351	PRJEB100	184938	Proteobacteria	Gammaproteobacteria	3.78545	39	-	CAKB01	108	3646	3402	1/3/13	3/15/17	Contig	Seydina	SAMEA2272736	GCA_000333735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/735/GCA_000333735.1_ASM33373v1	23070160	-
Streptococcus agalactiae FSL S3-077	1154772	PRJNA86133	86133	Terrabacteria group	Firmicutes	2.29297	35.6	-	ANPY01	91	2406	2194	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN02436215	GCA_000322805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/805/GCA_000322805.1_ASM32280v1	-	FSL S3-077
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03701	41.2	-	CEKP01	68	2020	1924	2/18/15	3/17/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234018	GCA_000947415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/415/GCA_000947415.1_Velvet_assembly	-	S15V
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.57274	38.3	-	FJIA01	63	3277	3121	2/20/16	3/27/17	Contig	SC	SAMEA2077789	GCA_900057785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/785/GCA_900057785.1_10625_3_7	-	2532STDY5467576
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.69131	50.8	-	CXJC01	384	5289	4506	7/16/15	2/24/17	Scaffold	SC	SAMEA2003899	GCA_001249135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/135/GCA_001249135.1_8289_7_88	-	87026
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.11118	68.1	-	LWVR01	420	7497	6811	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208581	GCA_001976725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/725/GCA_001976725.1_ASM197672v1	-	4187a
Vibrio cholerae	666	PRJNA242443	242443	Proteobacteria	Gammaproteobacteria	3.91395	47.2	-	JIDQ01	274	3655	3390	7/31/14	3/24/17	Contig	Los Alamos National Laboratory	SAMN02708831	GCA_000737015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/015/GCA_000737015.1_GFC_21	25212618	490-93
Clostridioides difficile	1496	PRJNA329109	329109	Terrabacteria group	Firmicutes	4.10318	28.7	-	MTVV01	7	3773	3565	1/26/17	3/22/17	Contig	Broad Institute	SAMN05504810	GCA_001971905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/905/GCA_001971905.1_ASM197190v1	-	20110961
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.09092	45.3	-	JNTU02	47	4896	4685	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741398	GCA_000706905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/905/GCA_000706905.2_ASM70690v2	"2,510,376,428,330,880"	CFSAN007462
Klebsiella pneumoniae CHS 28	1438734	PRJNA234197	234197	Proteobacteria	Gammaproteobacteria	5.95468	56.9	-	JMXC01	15	6033	5735	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581330	GCA_000693535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/535/GCA_000693535.1_Kleb_pneu_CHS_28_V1	-	CHS 28
Enterococcus faecalis EnGen0221	1157407	PRJNA88447	88447	Terrabacteria group	Firmicutes	3.24615	37.1	-	AIRS01	27	3421	3263	5/3/13	4/10/17	Scaffold	Broad Institute	SAMN00808903	GCA_000396565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/565/GCA_000396565.1_Ente_faec_B4568_V1	-	B4568
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.10864	52.4	-	MBBM01	191	2452	2135	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04852993	GCA_001859215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/215/GCA_001859215.1_ASM185921v1	-	USO_IT2425
Enterococcus faecium DO	333849	PRJNA71	71	Terrabacteria group	Firmicutes	2.84838	37.9	-	AAAK03	163	3003	2607	7/10/02	4/18/17	Contig	DOE Joint Genome Institute	SAMN02440386	GCA_000166815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/815/GCA_000166815.1_ASM16681v1	-	DO
Mycoplasma hyopneumoniae 232	295358	PRJNA13120	13120	Terrabacteria group	Tenericutes	0.892758	28.6	chromosome:NC_006360.1/AE017332.1	-	1	726	662	10/8/04	4/6/17	Complete Genome	Iowa State University	SAMN02603423	GCA_000008405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/405/GCA_000008405.1_ASM840v1	15489423	232
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.03556	60.1	-	FCIB01	19	4800	4637	1/21/16	3/27/17	Scaffold	SC	SAMEA2273948	GCA_001539925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/925/GCA_001539925.1_12082_2_80	-	2880STDY5682875
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.7506	31.2	-	FBDF01	23	1842	1739	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683143	GCA_001488815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/815/GCA_001488815.1_EC6299	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.93108	55.2	-	FJWN01	61	4876	4630	4/5/16	3/28/17	Scaffold	SC	SAMEA2273323	GCA_900075415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/415/GCA_900075415.1_11983_6_3	-	e1285
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.22002	64.2	-	FVGZ01	25	5244	5103	3/10/17	3/18/17	Contig	SC	SAMEA2071454	GCA_900133255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/255/GCA_900133255.1_10250_1_30	-	370
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.98614	55.3	-	JVYD01	289	4926	4574	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197187	GCA_001054135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/135/GCA_001054135.1_ASM105413v1	26230489	1222_ECLO
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.26121	67.3	-	MEBE01	71	6609	6204	11/18/16	6/28/17	Scaffold	Menzies School of Health Research	SAMN05712674	GCA_001882475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/475/GCA_001882475.1_ASM188247v1	-	MSMB0245
Pseudomonas sp. ASS-1	1793966	PRJNA393076	393076	Proteobacteria	Gammaproteobacteria	3.29114	62.6	-	NMQV01	69	3114	3010	7/27/17	8/1/17	Contig	Institute of Microbial Technology	SAMN07314873	GCA_002234375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/234/375/GCA_002234375.1_ASM223437v1	-	ASS-1
Streptomyces sp. 96-12	1789652	PRJNA309851	309851	Terrabacteria group	Actinobacteria	10.0807	70.9	-	LRTS01	1875	9551	7793	2/5/16	3/14/17	Contig	University of Florida	SAMN04441028	GCA_001550315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/550/315/GCA_001550315.1_ASM155031v1	-	96-12
Streptomyces sp. WAC04657	1779145	PRJNA308581	308581	Terrabacteria group	Actinobacteria	7.76158	72.8	-	LQYF01	5	6995	6506	3/15/16	3/13/17	Contig	University of Toronto	SAMN04397504	GCA_001592685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/685/GCA_001592685.1_ASM159268v1	-	WAC04657
Pseudomonas sp. IB20	1702250	PRJNA382312	382312	Proteobacteria	Gammaproteobacteria	6.48444	59.8	-	NMRE01	216	5975	5679	8/22/17	8/24/17	Contig	Spanish National Centre for Biotechnology	SAMN06703478	GCA_002263605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/605/GCA_002263605.1_ASM226360v1	-	IB20
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.53518	67.2	-	MEBF01	64	6848	6444	11/18/16	6/28/17	Scaffold	Menzies School of Health Research	SAMN05712675	GCA_001882505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/505/GCA_001882505.1_ASM188250v1	-	MSMB0258b
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.62176	55.5	-	JVOV01	57	4445	4296	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197429	GCA_001054695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/695/GCA_001054695.1_ASM105469v1	26230489	24_ECLO
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.28042	64.1	-	FSCX01	31	5254	5112	12/14/16	3/21/17	Contig	SC	SAMEA2070775	GCA_900133265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/265/GCA_900133265.1_10250_1_31	-	371
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.12199	55.5	-	FJXR01	85	5109	4817	4/5/16	3/28/17	Scaffold	SC	SAMEA2273318	GCA_900075425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/425/GCA_900075425.1_11983_7_94	-	e1252
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75098	31.2	-	FBBX01	26	1838	1744	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683110	GCA_001488835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/835/GCA_001488835.1_EC5850	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.12637	60	-	FCKP01	24	4911	4747	1/21/16	3/27/17	Scaffold	SC	SAMEA2274035	GCA_001539945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/945/GCA_001539945.1_12082_3_60	-	2880STDY5682963
Clostridium tetani E88	212717	PRJNA81	81	Terrabacteria group	Firmicutes	2.87333	28.5917	chromosome:NC_004557.1/AE015927.1; plasmid pE88:NC_004565.1/AF528097.1	-	2	2826	2699	2/4/03	3/29/17	Complete Genome	Gottingen Genomics Laboratory	SAMN02603289	GCA_000007625.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/625/GCA_000007625.1_ASM762v1	12552129	Massachusetts substr. E88
Enterococcus faecium E980	529885	PRJNA29607	29607	Terrabacteria group	Firmicutes	2.79263	38.1	-	ABQA01	131	2879	2673	3/26/10	3/22/17	Contig	"Dept. of Medical Microbiology, University Medical Center Utrecht, Utrecht, The Netherlands"	SAMN02471501	GCA_000172615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/615/GCA_000172615.1_ASM17261v1	20398277	E980
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.15388	52.4	-	MBBN01	172	2510	2196	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04852994	GCA_001859245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/245/GCA_001859245.1_ASM185924v1	-	USO_PL11-43
Enterococcus faecalis EnGen0222	1157408	PRJNA88449	88449	Terrabacteria group	Firmicutes	3.31696	37.1	-	AIRT01	36	3508	3332	5/3/13	3/24/17	Scaffold	Broad Institute	SAMN00808904	GCA_000396585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/585/GCA_000396585.1_Ente_faec_B4638_V1	-	B4638
Klebsiella pneumoniae CHS 29	1438735	PRJNA234198	234198	Proteobacteria	Gammaproteobacteria	5.85924	56.9	-	JMXD01	11	5955	5665	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581331	GCA_000693555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/555/GCA_000693555.1_Kleb_pneu_CHS_29_V1	-	CHS 29
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.09675	45.3	-	JNTV02	56	4920	4691	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741359	GCA_000706925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/925/GCA_000706925.2_ASM70692v2	"2,510,376,428,330,880"	CFSAN006130
Clostridioides difficile	1496	PRJNA329109	329109	Terrabacteria group	Firmicutes	4.16396	28.5	-	MTWB01	9	3827	3641	1/26/17	3/22/17	Contig	Broad Institute	SAMN05504811	GCA_001971925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/925/GCA_001971925.1_ASM197192v1	-	20111163
Vibrio cholerae	666	PRJNA242443	242443	Proteobacteria	Gammaproteobacteria	3.95436	47.6	-	JMBP01	114	3725	3534	7/31/14	3/24/17	Contig	Los Alamos National Laboratory	SAMN02693885	GCA_000737025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/025/GCA_000737025.1_GFC_20	25212618	254-93
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.10103	68.2	-	LWVS01	178	7416	6847	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208582	GCA_001976735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/735/GCA_001976735.1_ASM197673v1	-	4191a
Shigella sonnei	624	PRJEB2075	203826	Proteobacteria	Gammaproteobacteria	4.85547	50.4	-	CXMB01	435	5485	4657	7/16/15	2/24/17	Scaffold	SC	SAMEA1559962	GCA_001249155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/155/GCA_001249155.1_8489_2_85	-	94081275
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.38895	38.2	-	FJFL01	20	3102	3000	2/20/16	3/27/17	Contig	SC	SAMEA2080616	GCA_900058335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/335/GCA_900058335.1_10625_2_41	-	2532STDY5467514
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05607	41.1	-	CEGR01	68	2046	1948	2/18/15	3/17/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234097	GCA_000947435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/435/GCA_000947435.1_Velvet_assembly	-	S99I
Streptococcus agalactiae FSL S3-654	1154773	PRJNA86135	86135	Terrabacteria group	Firmicutes	2.27183	35.7	-	ANPX01	102	2431	2152	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN02436188	GCA_000322825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/825/GCA_000322825.1_ASM32282v1	-	FSL S3-654
Acinetobacter baumannii Naval-57	903927	PRJNA53453	53453	Proteobacteria	Gammaproteobacteria	3.9536	38.9	-	AMFP01	138	3837	3618	2/1/13	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00761216	GCA_000335535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/535/GCA_000335535.1_gacin39v1.0	-	Naval-57
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.80911	66.1	-	JTPK01	84	6477	6298	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105681	GCA_000792325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/325/GCA_000792325.1_AZPAE14984	25367914	AZPAE14984
Leptospira interrogans serovar Copenhageni str. R103	1049821	PRJNA74235	74235	Spirochaetes	Spirochaetia	4.55732	35	-	AHQU01	228	4062	3738	2/3/12	5/18/17	Scaffold	J. Craig Venter Institute	SAMN00739390	GCA_000246575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/575/GCA_000246575.2_CLC_glsol166	-	R103
Streptococcus pyogenes	1314	PRJNA310856	310856	Terrabacteria group	Firmicutes	1.8229	38.3	-	LVYP01	16	1803	1704	5/11/16	3/28/17	Contig	University of Camerino	SAMN04457846	GCA_001642205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/205/GCA_001642205.1_ASM164220v1	-	156
Neisseria meningitidis NM3230	1190580	PRJNA166969	166969	Proteobacteria	Betaproteobacteria	2.26808	51.8	-	AVNV01	146	2620	2240	8/19/13	3/21/17	Contig	IGS	SAMN01984865	GCA_000448225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/225/GCA_000448225.1_ASM44822v1	-	NM3230
Helicobacter pylori Hp H-24b	992094	PRJNA64215	64215	Proteobacteria	delta/epsilon subdivisions	1.66413	39.2	-	AKPY01	9	1639	1476	6/28/12	3/27/17	Contig	Institute for Genome Sciences	SAMN00778860	GCA_000275585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/275/585/GCA_000275585.2_ASM27558v2	-	Hp H-24b
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12537	39.6	-	CMOP01	64	2280	2026	3/23/15	3/11/17	Contig	SC	SAMEA2061709	GCA_001083285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/285/GCA_001083285.1_9803_7_37	-	type strain: N
Candidatus Riesia pediculicola USDA	515618	PRJNA29065	29065	Proteobacteria	Gammaproteobacteria	0.582127	28.589	chromosome:NC_014109.1/CP001085.1; plasmid pPAN:NC_013962.1/CP001086.1	-	2	533	490	3/16/10	4/7/17	Complete Genome	J. Craig Venter Institute	SAMN02603451	GCA_000093065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/093/065/GCA_000093065.1_ASM9306v1	-	USDA
Mycobacterium tuberculosis MD16265	1447489	PRJNA234602	234602	Terrabacteria group	Actinobacteria	4.42517	65.6	-	JLER01	95	4348	4130	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584640	GCA_000650655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/655/GCA_000650655.1_Myco_tube_MD16265_V1	-	MD16265
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.50158	32.1	-	JVZR01	79	2412	2301	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197147	GCA_001069375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/375/GCA_001069375.1_ASM106937v1	26230489	1188_SEPI
Bacillus cereus	1396	PRJNA270586	270586	Terrabacteria group	Firmicutes	5.69959	35.2	-	LCYO01	106	6170	5860	5/18/15	3/26/17	Scaffold	University of Groningen	SAMN03267266	GCA_001008695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/695/GCA_001008695.1_ASM100869v1	26679589	B4153
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.02826	37.9	-	JOYC01	26	3084	2977	7/15/14	2/26/17	Contig	Cornell University	SAMN02741511	GCA_000726885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/885/GCA_000726885.1_ASM72688v1	-	FSL R8-6033
Yersinia pestis SHAN12	755966	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.37139	48	-	ADTB01	1362	4198	3857	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403101	GCA_000325345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/345/GCA_000325345.1_ASM32534v1	23271803	SHAN12
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70462	30.2	-	CURF01	20	1758	1616	3/31/15	3/18/17	Contig	SC	SAMEA1010451	GCA_001225745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/745/GCA_001225745.1_7092_1_62	-	OXC6509
Clostridium perfringens str. 13	195102	PRJNA79	79	Terrabacteria group	Firmicutes	3.08574	28.5454	chromosome:NC_003366.1/BA000016.3; plasmid pCP13:NC_003042.1/AP003515.1	-	2	2791	2593	12/27/01	5/10/17	Complete Genome	Univ. Kyushu	SAMD00061119	GCA_000009685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/685/GCA_000009685.1_ASM968v1	11792842	13
Staphylococcus aureus M0478	1157033	PRJNA88623	88623	Terrabacteria group	Firmicutes	2.87986	32.9	-	AIWT01	9	2997	2832	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792160	GCA_000361285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/285/GCA_000361285.1_Stap_aure_M0478_V1	-	M0478
Staphylococcus aureus M0489	1157034	PRJNA88625	88625	Terrabacteria group	Firmicutes	2.97778	33	-	AIWU01	16	3134	2969	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792161	GCA_000361305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/305/GCA_000361305.1_Stap_aure_M0489_V1	-	M0489
Borreliella burgdorferi	139	PRJNA270494	270494	Spirochaetes	Spirochaetia	1.30155	28.5082	chromosome:NZ_CP019916.1/CP019916.1; plasmid p_cp26:NZ_CP019917.1/CP019917.1; plasmid p_cp32-2:NZ_CP019919.1/CP019919.1; plasmid p_cp32-3:NZ_CP019920.1/CP019920.1; plasmid p_cp32-5-1:NZ_CP019918.1/CP019918.1; plasmid p_cp32-9-4:NZ_CP019921.1/CP019921.1; plasmid p_lp17:NZ_CP019922.1/CP019922.1; plasmid p_lp28-1:NZ_CP019923.1/CP019923.1; plasmid p_lp36:NZ_CP019924.1/CP019924.1; plasmid p_lp54:NZ_CP019925.1/CP019925.1; plasmid p_lp56:NZ_CP019926.1/CP019926.1	-	11	1373	1253	5/19/17	5/24/17	Complete Genome	Bavarian Health and Food Safety Authority	SAMN03269134	GCA_002151485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/485/GCA_002151485.1_ASM215148v1	-	PAbe
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.72333	30.4	-	CUNZ01	18	1807	1721	3/31/15	3/18/17	Contig	SC	SAMEA1010615	GCA_001225785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/785/GCA_001225785.1_7065_7_73	-	OXC6421
Yersinia pestis YN1065	755967	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.4723	47.7	-	ADTC01	1395	4341	3933	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403102	GCA_000325365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/365/GCA_000325365.1_ASM32536v1	23271803	YN1065
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.10745	37.9	-	JOXT01	22	3147	3066	7/15/14	2/26/17	Contig	Cornell University	SAMN02741502	GCA_000726905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/905/GCA_000726905.1_ASM72690v1	-	FSL R8-5809
Bacillus cereus	1396	PRJNA274235	274235	Terrabacteria group	Firmicutes	5.47736	35.3	-	LABW01	48	5852	5495	7/1/15	3/26/17	Scaffold	TU Muenchen	SAMN03325927	GCA_001044475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/475/GCA_001044475.1_ASM104447v1	26555390	7/27/S
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.73763	31.8	-	JVZO01	102	2725	2620	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197150	GCA_001069395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/395/GCA_001069395.1_ASM106939v1	26230489	1190_SEPI
Mycobacterium tuberculosis MD15226	1447490	PRJNA234604	234604	Terrabacteria group	Actinobacteria	4.42355	65.6	-	JLEQ01	113	4369	4147	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584641	GCA_000650675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/675/GCA_000650675.1_Myco_tube_MD15226_V1	-	MD15226
Clostridium perfringens	1502	PRJNA299533	299533	Terrabacteria group	Firmicutes	3.34382	28.5	chromosome:NZ_CP013101.1/CP013101.1	-	1	3055	2885	10/26/16	4/5/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN04209542	GCA_001854085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/085/GCA_001854085.1_ASM185408v1	-	FORC_025
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09173	39.6	-	COFR02	152	2275	2055	3/23/15	3/15/17	Contig	SC	SAMEA1462979	GCA_001083405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/405/GCA_001083405.2_7622_5_93	-	ND6100
Helicobacter pylori FD423	1191279	PRJNA165757	165757	Proteobacteria	delta/epsilon subdivisions	1.62313	39.1	-	AKHM02	115	1667	1431	7/24/12	3/24/17	Contig	University of Malaya-Malaysian Genomics Resource Centre Berhad-University of New South Wales	SAMN00996392	GCA_000281675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/675/GCA_000281675.2_FD423	"2,301,227,824,051,310"	FD423
Neisseria meningitidis NM2866	1190581	PRJNA166971	166971	Proteobacteria	Betaproteobacteria	2.26676	51.8	-	AVNW01	137	2599	2214	8/19/13	3/21/17	Contig	IGS	SAMN01984866	GCA_000448245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/245/GCA_000448245.1_ASM44824v1	-	NM2866
Streptococcus pyogenes	1314	PRJNA310856	310856	Terrabacteria group	Firmicutes	1.7277	38.4	-	LVYO01	19	1731	1628	5/11/16	3/28/17	Contig	University of Camerino	SAMN04457491	GCA_001642215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/215/GCA_001642215.1_ASM164221v1	-	155
Leptospira interrogans serovar Bataviae str. UT234	1049807	PRJNA74237	74237	Spirochaetes	Spirochaetia	4.83017	35.1	-	AHQV01	410	4438	4038	2/3/12	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00739391	GCA_000246595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/595/GCA_000246595.2_CLC_glsol169	-	UT234
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.78134	66.1	-	JTPJ01	115	6558	6316	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105682	GCA_000792345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/345/GCA_000792345.1_AZPAE14985	25367914	AZPAE14985
Acinetobacter baumannii AA-014	903937	PRJNA53475	53475	Proteobacteria	Gammaproteobacteria	3.85793	39	-	AMGA01	61	3673	3492	2/1/13	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00761248	GCA_000335595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/595/GCA_000335595.1_gacin50v1.0	-	AA-014
Streptococcus agalactiae MRI Z1-218	1154881	PRJNA86421	86421	Terrabacteria group	Firmicutes	2.09352	35.2	-	ANPP01	25	2163	2045	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN00993320	GCA_000322845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/845/GCA_000322845.1_ASM32284v1	-	MRI Z1-218
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.27983	41.2	-	CEKE01	178	2286	2159	2/18/15	3/17/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234086	GCA_000947455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/455/GCA_000947455.1_Velvet_assembly	-	S95G
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.35026	38.3	-	FJHK01	22	3053	2946	2/20/16	3/27/17	Contig	SC	SAMEA2077496	GCA_900058345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/345/GCA_900058345.1_10625_2_36	-	2532STDY5467509
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.52082	50.7	-	CXCE01	414	4788	4253	7/16/15	2/24/17	Scaffold	SC	SAMEA954603	GCA_001249175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/175/GCA_001249175.1_5236_3_7	-	ShIB3277_440831
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.10671	68.1	-	LWVU01	155	7399	6881	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208584	GCA_001976755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/755/GCA_001976755.1_ASM197675v1	-	3944b
Vibrio cholerae O1 biovar El Tor	686	PRJNA259898	259898	Proteobacteria	Gammaproteobacteria	3.93765	47.6	-	JRBD01	117	3772	3341	9/9/14	8/8/17	Contig	"Russian Research Antiplague Institute ""Microbe"""	SAMN03014087	GCA_000753725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/725/GCA_000753725.1_ASM75372v1	-	MAK676
Clostridioides difficile	1496	PRJNA329109	329109	Terrabacteria group	Firmicutes	4.22414	28.5	-	MTWC01	5	3924	3709	1/26/17	3/22/17	Contig	Broad Institute	SAMN05504816	GCA_001971935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/935/GCA_001971935.1_ASM197193v1	-	20120014
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	4.965	45.3	-	JNSY02	87	4774	4544	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741377	GCA_000706945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/945/GCA_000706945.2_ASM70694v2	"2,510,376,428,330,880"	CFSAN007441
Klebsiella pneumoniae CHS 30	1438736	PRJNA234199	234199	Proteobacteria	Gammaproteobacteria	5.92095	56.9	-	JMXE01	5	5989	5703	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581332	GCA_000693575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/575/GCA_000693575.1_Kleb_pneu_CHS_30_V1	-	CHS 30
Enterococcus faecalis EnGen0223	1157409	PRJNA88451	88451	Terrabacteria group	Firmicutes	3.24253	37.1	-	AIRU01	26	3396	3249	5/3/13	3/24/17	Scaffold	Broad Institute	SAMN00808905	GCA_000396605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/605/GCA_000396605.1_Ente_faec_B4672_V1	-	B4672
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.13713	52.4	-	MBBO01	171	2465	2177	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04852995	GCA_001859255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/255/GCA_001859255.1_ASM185925v1	-	USO_PL11-71
Enterococcus faecium E1071	535205	PRJNA29887	29887	Terrabacteria group	Firmicutes	2.70077	37.9	-	ABQI01	96	2767	2578	3/26/10	3/22/17	Contig	"Dept. of Medical Microbiology, University Medical Center Utrecht"	SAMN02471502	GCA_000172655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/655/GCA_000172655.1_ASM17265v1	20398277	E1071
Maize bushy stunt phytoplasma	202462	PRJNA317711	317711	Terrabacteria group	Tenericutes	0.576118	28.5	chromosome:NZ_CP015149.1/CP015149.1	-	1	573	498	8/25/16	4/17/17	Complete Genome	Academia Sinica	SAMN04623572	GCA_001712875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/875/GCA_001712875.1_ASM171287v1	-	M3
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.13489	60	-	FCGL01	15	4895	4731	1/21/16	3/27/17	Scaffold	SC	SAMEA2273902	GCA_001539965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/965/GCA_001539965.1_12082_2_38	-	2880STDY5682829
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.7329	31.2	-	FBCE01	23	1824	1728	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683112	GCA_001488855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/855/GCA_001488855.1_EC6124	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.88826	55.2	-	FJXW01	69	4764	4484	4/5/16	3/28/17	Scaffold	SC	SAMEA2273324	GCA_900075445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/445/GCA_900075445.1_12082_4_46	-	e1286
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96821	64.2	-	FVGX01	13	4908	4767	3/10/17	3/18/17	Contig	SC	SAMEA2068960	GCA_900133275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/275/GCA_900133275.1_10250_1_32	-	372
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.75154	55.6	-	JVGX01	46	4621	4434	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197635	GCA_001056795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/795/GCA_001056795.1_ASM105679v1	26230489	443_ECLO
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.64631	67	-	MEBG01	86	6971	6498	11/18/16	6/28/17	Scaffold	Menzies School of Health Research	SAMN05712676	GCA_001882515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/515/GCA_001882515.1_ASM188251v1	-	MSMB0268a
Pseudomonas sp. ERMR1:02	1805930	PRJNA391252	391252	Proteobacteria	Gammaproteobacteria	6.73027	58.4	-	NKJI01	56	6299	5077	8/29/17	8/29/17	Contig	CSIR-Institute of Himalayan Bioresource Technology	SAMN07259965	GCA_002277815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/815/GCA_002277815.1_ASM227781v1	-	ERMR1:02
Streptomyces sp. MJM8645	1120523	PRJNA295235	295235	Terrabacteria group	Actinobacteria	9.23444	72.8	-	LJJF01	5	7894	7558	4/21/16	3/13/17	Contig	"National Academy of Agricultural Science, Rural Development Adminstration"	SAMN04044472	GCA_001625365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/625/365/GCA_001625365.1_ASM162536v1	-	MJM8645
Streptomyces sp. FXJ1.172	710705	PRJNA319451	319451	Terrabacteria group	Actinobacteria	9.18518	71.2	-	LWRP01	215	8337	7647	5/4/16	3/13/17	Contig	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN04892703	GCA_001636945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/945/GCA_001636945.1_ASM163694v1	-	FXJ1.172
Pseudomonas sp. PIC25	1958773	PRJNA369069	369069	Proteobacteria	Gammaproteobacteria	6.04764	63.6	-	MUJY01	192	5501	5265	9/6/17	9/8/17	Contig	Instituto de Agricultura Sostenible	SAMN06276230	GCA_002286785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/785/GCA_002286785.1_ASM228678v1	-	PIC25
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	6.60196	67.2	-	MEBI01	61	6159	5760	11/18/16	6/28/17	Scaffold	Menzies School of Health Research	SAMN05712678	GCA_001882545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/545/GCA_001882545.1_ASM188254v1	-	MSMB0668
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.74596	55.6	-	JVBS01	63	4603	4421	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197770	GCA_001057375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/375/GCA_001057375.1_ASM105737v1	26230489	569_ECLO
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.26728	64.1	-	FSCW01	79	5253	5088	12/14/16	3/21/17	Contig	SC	SAMEA2071455	GCA_900133285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/285/GCA_900133285.1_10250_1_33	-	373
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.13269	55	-	FJXX01	70	5064	4792	4/5/16	3/28/17	Scaffold	SC	SAMEA2273326	GCA_900075455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/455/GCA_900075455.1_11983_6_5	-	e1294
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.74983	31.1	-	FBKJ01	77	1770	1667	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683328	GCA_001488875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/875/GCA_001488875.1_H092560131	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.01078	59.7	-	FCGF01	16	4768	4616	1/21/16	3/27/17	Scaffold	SC	SAMEA2274102	GCA_001539985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/539/985/GCA_001539985.1_12045_8_24	-	2880STDY5683033
Mycoplasma sp. (ex Biomphalaria glabrata)	1749074	PRJNA12879	12879	Terrabacteria group	Tenericutes	0.64783	28.5	chromosome:NZ_CP013128.1/CP013128.1	-	1	601	565	1/4/16	4/21/17	Complete Genome	Washington University (WashU)	SAMN04147048	GCA_001484045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/045/GCA_001484045.1_ASM148404v1	-	-
Enterococcus faecium E1162	535206	PRJNA29921	29921	Terrabacteria group	Firmicutes	2.7114	38	-	ABQJ01	139	2769	2623	3/26/10	3/22/17	Contig	"Dept. of Medical Microbiology, University Medical Center Utrecht"	SAMN02471503	GCA_000172675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/675/GCA_000172675.1_ASM17267v1	20398277	E1162
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.10834	52.4	-	MBBP01	163	2435	2143	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04852996	GCA_001859285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/285/GCA_001859285.1_ASM185928v1	-	USO_PT11-77
Enterococcus faecalis EnGen0224	1157410	PRJNA88453	88453	Terrabacteria group	Firmicutes	3.30123	37.2	-	AIRV01	33	3464	3292	5/3/13	3/24/17	Scaffold	Broad Institute	SAMN00808906	GCA_000396625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/625/GCA_000396625.1_Ente_faec_B4674_V1	-	B4674
Klebsiella pneumoniae CHS 31	1438737	PRJNA234200	234200	Proteobacteria	Gammaproteobacteria	5.77825	57	-	JMXF01	16	5873	5605	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581333	GCA_000693595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/595/GCA_000693595.1_Kleb_pneu_CHS_31_V1	-	CHS 31
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.08946	45.3	-	JNTS02	58	4896	4691	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741396	GCA_000706965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/965/GCA_000706965.2_ASM70696v2	"2,510,376,428,330,880"	CFSAN007460
Clostridioides difficile	1496	PRJNA329109	329109	Terrabacteria group	Firmicutes	4.09372	28.6	-	MTVW01	1	3752	3558	1/26/17	3/22/17	Contig	Broad Institute	SAMN05504812	GCA_001971945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/945/GCA_001971945.1_ASM197194v1	-	20110973
Vibrio cholerae O1 biovar El Tor	686	PRJNA259897	259897	Proteobacteria	Gammaproteobacteria	4.01406	47.5	-	JREO01	108	3864	3572	9/15/14	3/24/17	Contig	"Russian Research Antiplague Institute ""Microbe"""	SAMN03014086	GCA_000754625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/625/GCA_000754625.1_ASM75462v1	-	May-66
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.17353	68.1	-	LWVW01	291	7485	6813	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208586	GCA_001976785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/785/GCA_001976785.1_ASM197678v1	-	3997a
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.64365	50.7	-	CXKY01	445	5215	4470	7/16/15	2/24/17	Scaffold	SC	SAMEA2004902	GCA_001249215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/215/GCA_001249215.1_8290_4_53	-	109280
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54576	38.3	-	FJMG01	33	3244	3112	2/20/16	3/27/17	Contig	SC	SAMEA2080800	GCA_900058355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/355/GCA_900058355.1_10625_3_83	-	2532STDY5467652
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04783	41.2	-	CEID01	120	2075	1945	2/18/15	3/17/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234012	GCA_000947495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/495/GCA_000947495.1_Velvet_assembly	-	S14M
Streptococcus agalactiae GB00900	1154943	PRJNA86559	86559	Terrabacteria group	Firmicutes	2.19245	35.7	-	ANQX01	49	2281	2149	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN02436309	GCA_000322865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/865/GCA_000322865.1_ASM32286v1	-	GB00900
Acinetobacter baumannii WC-A-92	903931	PRJNA53463	53463	Proteobacteria	Gammaproteobacteria	3.83881	39	-	AMFU01	151	3785	3398	2/1/13	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00761249	GCA_000335615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/615/GCA_000335615.1_gacin44v1.0	-	WC-A-92
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.47151	66.4	-	JTPI01	90	6197	5993	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105683	GCA_000792365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/365/GCA_000792365.1_AZPAE14986	25367914	AZPAE14986
Leptospira interrogans serovar Medanensis str. L0887	1049921	PRJNA74239	74239	Spirochaetes	Spirochaetia	4.76042	35.1	-	AHQW01	365	4360	3951	2/3/12	5/19/17	Scaffold	J. Craig Venter Institute	SAMN00739392	GCA_000246615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/246/615/GCA_000246615.2_CLC_glsol170	-	L0887
Streptococcus pyogenes	1314	PRJNA310856	310856	Terrabacteria group	Firmicutes	1.73436	38.4	-	LVYS01	23	1727	1641	5/11/16	3/28/17	Contig	University of Camerino	SAMN04457853	GCA_001642225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/225/GCA_001642225.1_ASM164222v1	-	159
Neisseria meningitidis LNP27256	1386084	PRJNA215157	215157	Proteobacteria	Betaproteobacteria	2.17557	51.6	-	AVOU01	203	2568	2181	9/6/13	3/15/17	Contig	Institut Pasteur	SAMN02469941	GCA_000464995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/995/GCA_000464995.1_LNP27256	24092789	LNP27256
Helicobacter pylori BCS100H1	981210	PRJEA62405	62405	Proteobacteria	delta/epsilon subdivisions	1.5484	38.9	-	CADC01	31	1537	1343	3/9/11	3/23/17	Contig	MHH Hannover Medical School	SAMEA2272805	GCA_000285035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/035/GCA_000285035.1_ASM28503v1	21383187	BCS100H1
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.16692	39.6	-	CLTD01	50	2354	2148	3/21/15	3/4/17	Contig	SC	SAMEA1029065	GCA_001083525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/525/GCA_001083525.1_6972_4_7	-	SMRU2599
Campylobacter sp. RM16704	1500960	PRJNA248029	248029	Proteobacteria	delta/epsilon subdivisions	1.55754	28.5	chromosome:NZ_CP007769.1/CP007769.1	-	1	1584	1496	1/7/15	4/10/17	Complete Genome	"USDA, ARS, WRRC"	SAMN03248551	GCA_000816245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/245/GCA_000816245.1_ASM81624v1	25381664	RM16704
Mycobacterium tuberculosis MD16568	1447491	PRJNA234605	234605	Terrabacteria group	Actinobacteria	4.36115	65.5	-	JLEP01	96	4338	4104	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584642	GCA_000650695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/695/GCA_000650695.1_Myco_tube_MD16568_V1	-	MD16568
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.59549	31.9	-	JWGH01	160	2554	2468	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03196975	GCA_001069845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/845/GCA_001069845.1_ASM106984v1	26230489	1013_SEPI
Bacillus cereus	1396	PRJNA274235	274235	Terrabacteria group	Firmicutes	5.84121	35.1	-	JYFW01	45	6155	5795	7/1/15	3/26/17	Scaffold	TU Muenchen	SAMN03325925	GCA_001044485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/485/GCA_001044485.1_ASM104448v1	26555390	#17
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	2.94937	37.9	-	JOYG01	18	3012	2910	7/15/14	2/26/17	Contig	Cornell University	SAMN02741515	GCA_000726915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/915/GCA_000726915.1_ASM72691v1	-	FSL R8-6046
Yersinia pestis YN1683	755968	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.30211	47.9	-	ADTD01	1897	4251	3704	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403103	GCA_000325385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/385/GCA_000325385.1_ASM32538v1	23271803	YN1683
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.71124	30.3	-	CUJH01	16	1818	1688	3/31/15	3/18/17	Contig	SC	SAMEA1010534	GCA_001225805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/805/GCA_001225805.1_7038_3_5	-	OXC6254
Mycoplasma hyopneumoniae 7422	754503	PRJNA47327	47327	Terrabacteria group	Tenericutes	0.898495	28.5	chromosome:NC_021831.1/CP003802.1	-	1	733	653	7/15/13	4/8/17	Complete Genome	Genesul	SAMN02603242	GCA_000427215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/427/215/GCA_000427215.1_ASM42721v1	23497205	7422
Staphylococcus aureus M0493	1224933	PRJNA173481	173481	Terrabacteria group	Firmicutes	2.87699	32.8	-	ANZX01	4	3010	2848	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN01125846	GCA_000361325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/325/GCA_000361325.1_Stap_aure_M0493_V1	-	M0493
Staphylococcus aureus M0494	1157035	PRJNA88627	88627	Terrabacteria group	Firmicutes	2.80805	32.9	-	AIWV01	2	2908	2754	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00792162	GCA_000361345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/345/GCA_000361345.1_Stap_aure_M0494_V1	-	M0494
Mycoplasma hyopneumoniae 168-L	1116211	PRJNA76853	76853	Terrabacteria group	Tenericutes	0.921093	28.5	chromosome:NC_021283.1/CP003131.1	-	1	746	690	5/22/13	4/8/17	Complete Genome	Huazhong Agricultural University	SAMN02603324	GCA_000400855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/855/GCA_000400855.1_ASM40085v1	23384176	168-L
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.61254	30.4	-	CUJO01	8	1700	1591	3/31/15	3/18/17	Contig	SC	SAMEA1010475	GCA_001225845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/845/GCA_001225845.1_7038_3_56	-	OXC6306
Yersinia pestis YN2179	755969	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.30737	48.2	-	ADTE01	1605	4144	3715	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403104	GCA_000325405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/405/GCA_000325405.1_ASM32540v1	23271803	YN2179
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	2.88227	37.7	-	JOYI01	27	2971	2867	7/15/14	2/26/17	Contig	Cornell University	SAMN02741517	GCA_000726925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/925/GCA_000726925.1_ASM72692v1	-	FSL R8-6122
Bacillus cereus	1396	PRJNA274235	274235	Terrabacteria group	Firmicutes	5.56541	35.3	-	JZEV01	77	5964	5586	7/1/15	8/28/17	Scaffold	TU Muenchen	SAMN03325931	GCA_001044555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/555/GCA_001044555.1_ASM104455v1	26555390	F3162-04
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.59762	31.9	-	JWFY01	145	2561	2469	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03196984	GCA_001069925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/925/GCA_001069925.1_ASM106992v1	26230489	1021.rep1_SEPI
Mycobacterium tuberculosis MD16571	1447492	PRJNA234607	234607	Terrabacteria group	Actinobacteria	4.37849	65.6	-	JLEO01	91	4326	4105	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584643	GCA_000650715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/715/GCA_000650715.1_Myco_tube_MD16571_V1	-	MD16571
Mycoplasma hyopneumoniae 168	907287	PRJNA53881	53881	Terrabacteria group	Tenericutes	0.925576	28.5	chromosome:NC_017509.1/CP002274.1	-	1	747	688	11/24/10	4/7/17	Complete Genome	Huazhong Agricultural University	SAMN02603316	GCA_000183185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/185/GCA_000183185.1_ASM18318v1	21148737	168
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.19275	39.5	-	CMRM01	81	2446	2193	3/22/15	3/4/17	Contig	SC	SAMEA2061745	GCA_001083625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/625/GCA_001083625.1_9803_8_40	-	6B
Helicobacter pylori NQ315	981212	PRJEA62437	62437	Proteobacteria	delta/epsilon subdivisions	1.60194	39	-	CADE01	57	1594	1429	3/9/11	3/23/17	Contig	MHH Hannover Medical School	SAMEA2272015	GCA_000285075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/075/GCA_000285075.1_ASM28507v1	21383187	NQ315
Neisseria meningitidis Nm10259	1307438	PRJNA193554	193554	Proteobacteria	Betaproteobacteria	2.05389	51.8	-	ARYF01	170	2347	1997	9/27/13	3/21/17	Contig	Wayne State University	SAMN02472120	GCA_000471865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/865/GCA_000471865.1_ASM47186v1	23902748	Nm10259
Streptococcus pyogenes	1314	PRJNA310856	310856	Terrabacteria group	Firmicutes	1.83987	38.3	-	LVYT01	33	1858	1768	5/11/16	3/28/17	Contig	University of Camerino	SAMN04457860	GCA_001642265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/265/GCA_001642265.1_ASM164226v1	-	160
Leptospira interrogans serovar Manilae	214675	PRJNA240265	240265	Spirochaetes	Spirochaetia	4.62894	35	-	JFZO01	191	4183	3768	4/4/14	4/10/17	Scaffold	INSTITUT PASTEUR	SAMN02673560	GCA_000612525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/525/GCA_000612525.2_M77v1	24686063	mutant m77
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.85515	66.1	-	JTPH01	121	6602	6353	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105684	GCA_000792385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/385/GCA_000792385.1_AZPAE14987	25367914	AZPAE14987
Acinetobacter baumannii OIFC047	903933	PRJNA53467	53467	Proteobacteria	Gammaproteobacteria	3.74068	38.9	-	AMFW01	39	3551	3382	2/1/13	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00761250	GCA_000335635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/635/GCA_000335635.1_gacin46v1.0	-	OIFC047
Streptococcus agalactiae GB00940	1154956	PRJNA86585	86585	Terrabacteria group	Firmicutes	1.99863	35.3	-	ANQV01	51	2047	1907	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN02436193	GCA_000322885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/885/GCA_000322885.1_ASM32288v1	-	GB00940
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.38894	41.4	-	CEHM01	335	2343	2158	2/18/15	3/17/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233949	GCA_000947535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/535/GCA_000947535.1_Velvet_assembly	-	LS8I
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.62406	38.3	-	FJBP01	37	3342	3201	2/20/16	3/27/17	Contig	SC	SAMEA2064211	GCA_900058555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/555/GCA_900058555.1_10771_3_2	-	2531STDY5467379
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.85782	50.5	-	CXET01	409	5264	4722	7/16/15	2/24/17	Scaffold	SC	SAMEA954548	GCA_001249235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/235/GCA_001249235.1_5417_3_3	-	20071599_1361419
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.1	68.2	-	LWWA01	136	7334	6793	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208590	GCA_001976805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/805/GCA_001976805.1_ASM197680v1	-	RF6-BP26
Vibrio cholerae	666	PRJNA255199	255199	Proteobacteria	Gammaproteobacteria	3.95619	47.6	-	JPOP01	451	3714	3565	10/3/14	3/24/17	Contig	"Federal Service on Customers' Rights Protection and Human Well-Being Surveillance, Rostov Research Institute for Plague Control"	SAMN02911891	GCA_000763075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/075/GCA_000763075.1_ASM76307v1	-	RND81
Clostridioides difficile	1496	PRJNA329109	329109	Terrabacteria group	Firmicutes	4.25905	28.9	-	MTWA01	13	3945	3745	1/26/17	3/21/17	Contig	Broad Institute	SAMN05504802	GCA_001971985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/985/GCA_001971985.1_ASM197198v1	-	20111144
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.15259	45.2	-	JNTL02	42	4930	4726	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741391	GCA_000706985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/985/GCA_000706985.2_ASM70698v2	"2,510,376,428,330,880"	CFSAN007455
Klebsiella pneumoniae CHS 32	1438738	PRJNA234201	234201	Proteobacteria	Gammaproteobacteria	5.88175	56.9	-	JMXG01	13	5961	5679	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581334	GCA_000693615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/615/GCA_000693615.1_Kleb_pneu_CHS_32_V1	-	CHS 32
Enterococcus faecalis EnGen0225	1157411	PRJNA88455	88455	Terrabacteria group	Firmicutes	3.33174	37.1	-	AIRW01	38	3518	3351	5/3/13	3/24/17	Scaffold	Broad Institute	SAMN00808907	GCA_000396645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/645/GCA_000396645.1_Ente_faec_B4969_V1	-	B4969
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.12234	52.4	-	MBBQ01	156	2471	2163	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04852997	GCA_001859295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/295/GCA_001859295.1_ASM185929v1	-	USO_SK11-40
Enterococcus faecium E1636	544875	PRJNA30403	30403	Terrabacteria group	Firmicutes	2.83833	37.8	-	ABRY01	223	2953	2683	3/26/10	3/22/17	Contig	"Dept. of Medical Microbiology, University Medical Center Utrecht, Utrecht, The Netherlands"	SAMN02471514	GCA_000172835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/835/GCA_000172835.1_ASM17283v1	20398277	E1636
Clostridioides difficile CF5	699036	PRJNA42465	42465	Terrabacteria group	Firmicutes	4.15952	28.5	chromosome:FN665652.1	-	1	-	-	3/24/10	2/27/15	Complete Genome	Wellcome Trust Sanger Institute	SAMEA3138367	GCA_000210415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/415/GCA_000210415.1_ASM21041v1	-	CF5
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.11073	60.1	-	FCKJ01	14	4801	4655	1/21/16	3/27/17	Scaffold	SC	SAMEA2274030	GCA_001540005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/005/GCA_001540005.1_12082_3_55	-	2880STDY5682958
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.58769	31.8	-	FBGD01	24	1586	1528	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683224	GCA_001488895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/895/GCA_001488895.1_O6C1	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.00911	54.9	-	FJXY01	64	4990	4729	4/5/16	3/28/17	Scaffold	SC	SAMEA2273329	GCA_900075465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/465/GCA_900075465.1_11983_6_9	-	e1316
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.1666	64.1	-	FSCY01	48	5149	5015	12/14/16	3/21/17	Contig	SC	SAMEA2070776	GCA_900133295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/295/GCA_900133295.1_10250_1_34	-	374
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.90878	55.4	-	JULZ01	100	4710	4562	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198179	GCA_001059905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/905/GCA_001059905.1_ASM105990v1	26230489	959_ECLO
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.5498	67.1	-	MEBL01	126	6910	6396	11/18/16	6/28/17	Scaffold	Menzies School of Health Research	SAMN05712681	GCA_001882555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/555/GCA_001882555.1_ASM188255v1	-	MSMB0677
Pseudomonas sp. PICF141	1949067	PRJNA369069	369069	Proteobacteria	Gammaproteobacteria	6.00318	58.8	-	MUNM01	90	5517	5264	9/6/17	9/8/17	Contig	Instituto de Agricultura Sostenible	SAMN06276402	GCA_002286815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/815/GCA_002286815.1_ASM228681v1	-	PICF141
Streptomyces sp. F-3	1840095	PRJDB4777	319785	Terrabacteria group	Actinobacteria	6.19074	71.9	-	BDDR01	139	5444	5123	5/7/16	3/13/17	Contig	"Shandong University,  LushanWang"	SAMD00051289	GCA_001653115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/115/GCA_001653115.1_ASM165311v1	-	-
Streptomyces sp. ERV7	1322334	PRJNA322581	322581	Terrabacteria group	Actinobacteria	7.10529	71.4	-	LYOY01	116	6465	5974	5/31/16	3/13/17	Contig	"Centre for Microbial Ecology and Genoics, University of Pretoria,"	SAMN05163630	GCA_001653515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/515/GCA_001653515.1_ASM165351v1	-	ERV7
Pseudomonas sp. WN033	2032629	PRJNA400779	400779	Proteobacteria	Gammaproteobacteria	4.15522	59.9	-	NSKG01	23	3847	3734	9/6/17	9/8/17	Contig	"Institute of Agricultural c and Regional Planning, Chinese Academy of Agricultural Sciences"	SAMN07573094	GCA_002287035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/035/GCA_002287035.1_ASM228703v1	-	WN033
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.52245	67.1	-	MEBM01	173	6921	6363	11/18/16	6/28/17	Scaffold	Menzies School of Health Research	SAMN05712682	GCA_001882585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/585/GCA_001882585.1_ASM188258v1	-	MSMB0678
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.76274	55.4	-	JVKL01	76	4581	4380	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197543	GCA_001076375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/375/GCA_001076375.1_ASM107637v1	26230489	353_ECLO
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.29139	64.1	-	FSCZ01	18	5362	5254	12/14/16	3/21/17	Contig	SC	SAMEA2068961	GCA_900133305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/305/GCA_900133305.1_10250_1_35	-	375
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.93891	54.9	-	FJYA01	64	4847	4598	4/5/16	3/28/17	Scaffold	SC	SAMEA2273330	GCA_900075475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/475/GCA_900075475.1_11983_6_10	-	e1319
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.73225	31.3	-	FBGY01	51	1804	1664	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683245	GCA_001488915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/915/GCA_001488915.1_H055260498	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.17342	59.8	-	FCJV01	30	4913	4770	1/21/16	3/27/17	Scaffold	SC	SAMEA2274012	GCA_001540025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/025/GCA_001540025.1_12082_3_40	-	2880STDY5682940
Mycoplasma hyopneumoniae 7448	262722	PRJNA10639	10639	Terrabacteria group	Tenericutes	0.920079	28.5	chromosome:NC_007332.1/AE017244.1	-	1	745	683	8/8/05	4/6/17	Complete Genome	LNCC - Laboratorio Nacional de Computacao Cientifica	SAMN02603525	GCA_000008225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/225/GCA_000008225.1_ASM822v1	16077101	7448
Enterococcus faecium E1679	546340	PRJNA30569	30569	Terrabacteria group	Firmicutes	2.92818	37.7	-	ABSC01	340	3021	2779	3/26/10	3/22/17	Contig	"Dept. of Medical Microbiology, University Medical Center Utrecht, Utrecht, The Netherlands"	SAMN02471504	GCA_000172875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/875/GCA_000172875.1_ASM17287v1	20398277	E1679
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.11521	52.4	-	MBBR01	146	2453	2146	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04852998	GCA_001859325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/325/GCA_001859325.1_ASM185932v1	-	USO_SI11004
Enterococcus faecalis EnGen0226	1157412	PRJNA88457	88457	Terrabacteria group	Firmicutes	3.08939	37.3	-	AIRX01	20	3227	3080	5/3/13	4/10/17	Scaffold	Broad Institute	SAMN00808908	GCA_000396665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/665/GCA_000396665.1_Ente_faec_B5076_V1	-	B5076
Klebsiella pneumoniae CHS 33	1438739	PRJNA234202	234202	Proteobacteria	Gammaproteobacteria	5.91592	56.9	-	JMXH01	15	5992	5709	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581335	GCA_000693635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/635/GCA_000693635.1_Kleb_pneu_CHS_33_V1	-	CHS 33
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.05269	45.2	-	JNSX02	56	4811	4577	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741376	GCA_000707005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/005/GCA_000707005.2_ASM70700v2	"2,510,376,428,330,880"	CFSAN007440
Clostridioides difficile	1496	PRJNA329109	329109	Terrabacteria group	Firmicutes	4.1564	28.5	-	MTWD01	3	3870	3672	1/26/17	3/22/17	Contig	Broad Institute	SAMN05504804	GCA_001972005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/005/GCA_001972005.1_ASM197200v1	-	20120020
Vibrio cholerae ZWU0020	1339249	PRJNA205585	205585	Proteobacteria	Gammaproteobacteria	4.03825	47.5	-	JRJX01	245	3869	3673	12/30/14	3/25/17	Contig	University of Oregon	SAMN03021537	GCA_000812045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/045/GCA_000812045.1_ZWU0020.1	-	ZWU0020
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.07064	68.2	-	LWVY01	212	7324	6730	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208588	GCA_001976815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/815/GCA_001976815.1_ASM197681v1	-	RF6-BP2
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.86418	50.5	-	CWWR01	486	5488	4581	7/16/15	2/24/17	Scaffold	SC	SAMEA2247155	GCA_001249255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/255/GCA_001249255.1_11822_8_61	-	Aug-38
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.64093	38.3	-	FJDH01	37	3345	3195	2/20/16	3/28/17	Contig	SC	SAMEA2065578	GCA_900058565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/565/GCA_900058565.1_10771_3_18	-	2531STDY5467395
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.08298	41.1	-	CEHI01	63	2068	1979	2/18/15	3/17/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234075	GCA_000947555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/555/GCA_000947555.1_Velvet_assembly	-	S90C
Streptococcus agalactiae GB00951	1154958	PRJNA86589	86589	Terrabacteria group	Firmicutes	2.05019	35.2	-	ANQU01	36	2057	1944	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN02436192	GCA_000322905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/905/GCA_000322905.1_ASM32290v1	-	GB00951
Acinetobacter baumannii OIFC338	903934	PRJNA53469	53469	Proteobacteria	Gammaproteobacteria	4.15568	38.9	-	AMFX01	108	4137	3920	2/1/13	5/18/17	Contig	Walter Reed Army Institute of Research	SAMN00761245	GCA_000335655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/655/GCA_000335655.1_gacin47v1.0	-	OIFC338
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.81413	66.1	-	JTMV01	117	6618	6353	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105748	GCA_000792395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/395/GCA_000792395.1_AZPAE15051	25367914	AZPAE15051
Leptospira interrogans serovar Muenchen	436145	PRJNA283268	283268	Spirochaetes	Spirochaetia	4.64771	35.1	-	LCZF01	158	4241	3774	6/9/15	4/10/17	Scaffold	UFPel	SAMN03610058	GCA_001022315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/022/315/GCA_001022315.1_ASM102231v1	25976319	acegua
Streptococcus pyogenes	1314	PRJNA302716	302716	Terrabacteria group	Firmicutes	1.81263	38.3	-	MUYP01	29	1845	1754	3/3/17	3/6/17	Contig	TAILORED-Treatment project	SAMN06286562	GCA_002014815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/815/GCA_002014815.1_ASM201481v1	-	CCUG 47803
Neisseria meningitidis Nm9418	1307439	PRJNA193555	193555	Proteobacteria	Betaproteobacteria	2.04673	51.8	-	ARYG01	159	2330	2014	9/27/13	3/21/17	Contig	Wayne State University	SAMN02472118	GCA_000471885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/885/GCA_000471885.1_ASM47188v1	23902748	Nm9418
Helicobacter pylori NQ1712	981213	PRJEA62439	62439	Proteobacteria	delta/epsilon subdivisions	1.57258	39.1	-	CADF01	62	1566	1389	3/9/11	3/23/17	Contig	MHH Hannover Medical School	SAMEA2272517	GCA_000285095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/095/GCA_000285095.1_ASM28509v1	21383187	NQ1712
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09707	39.7	-	CMQI01	57	2332	2095	3/23/15	3/4/17	Contig	SC	SAMEA2061953	GCA_001083645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/645/GCA_001083645.1_9803_8_14	-	19F
Mycoplasma hyopneumoniae J	262719	PRJNA10675	10675	Terrabacteria group	Tenericutes	0.897405	28.5	chromosome:NC_007295.1/AE017243.1	-	1	728	666	8/5/05	4/6/17	Complete Genome	LNCC - Laboratorio Nacional de Computacao Cientifica	SAMN02603526	GCA_000008205.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/205/GCA_000008205.1_ASM820v1	16077101	J
Mycobacterium tuberculosis MD17006	1447493	PRJNA234608	234608	Terrabacteria group	Actinobacteria	4.37631	65.6	-	JLEN01	118	4335	4104	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584644	GCA_000650735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/735/GCA_000650735.1_Myco_tube_MD17006_V1	-	MD17006
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.60379	31.9	-	JWFC01	118	2559	2453	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197006	GCA_001070025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/025/GCA_001070025.1_ASM107002v1	26230489	1040_SEPI
Bacillus cereus	1396	PRJNA274235	274235	Terrabacteria group	Firmicutes	5.92603	35.1	-	JYPH01	49	6317	5751	7/1/15	8/28/17	Scaffold	TU Muenchen	SAMN03325930	GCA_001044565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/565/GCA_001044565.1_ASM104456v1	26555390	F528-94
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.12657	37.9	-	JOYY01	22	3187	3082	7/15/14	2/26/17	Contig	Cornell University	SAMN02741533	GCA_000726965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/965/GCA_000726965.1_ASM72696v1	-	FSL R8-6317
Yersinia pestis YN2551	755970	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.52431	47.5	-	ADTF01	880	4297	4041	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403105	GCA_000325425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/425/GCA_000325425.1_ASM32542v1	23271803	YN2551
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66565	30.4	-	CURD01	17	1764	1669	3/31/15	3/18/17	Contig	SC	SAMEA1010448	GCA_001225885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/885/GCA_001225885.1_7092_1_61	-	OXC6508
Mycoplasma synoviae 53	262723	PRJNA10676	10676	Terrabacteria group	Tenericutes	0.799476	28.5	chromosome:NC_007294.1/AE017245.1	-	1	725	651	8/5/05	4/6/17	Complete Genome	LNCC - Laboratorio Nacional de Computacao Cientifica	SAMN02603527	GCA_000008245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/245/GCA_000008245.1_ASM824v1	16077101	53
Staphylococcus aureus M0510	1158533	PRJNA88975	88975	Terrabacteria group	Firmicutes	2.97949	32.9	-	AJCZ01	6	3123	2955	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809186	GCA_000361365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/365/GCA_000361365.1_Stap_aure_M0510_V1	-	M0510
Staphylococcus aureus M0513	1158534	PRJNA88977	88977	Terrabacteria group	Firmicutes	2.93285	32.9	-	AJDA01	1	3047	2843	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809187	GCA_000361385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/385/GCA_000361385.1_Stap_aure_M0513_V1	-	M0513
Clostridium perfringens	1502	PRJDB5093	338644	Terrabacteria group	Firmicutes	3.13501	28.4792	chromosome:AP017630.1; plasmid pCBA7123-01:AP017631.1	-	2	-	-	8/25/16	8/25/16	Complete Genome	Korea Basic Science Institute	SAMD00057672	GCA_002355795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/795/GCA_002355795.1_ASM235579v1	-	CBA7123
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.68714	30.3	-	CURP01	18	1771	1647	3/31/15	3/18/17	Contig	SC	SAMEA1010357	GCA_001225925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/925/GCA_001225925.1_7092_1_73	-	OXC6520
Yersinia pestis YN2588	755971	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.30794	48	-	ADTG01	1301	4137	3784	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403106	GCA_000325445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/445/GCA_000325445.1_ASM32544v1	23271803	YN2588
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	2.88818	37.9	-	JOYZ01	16	2917	2815	7/15/14	2/26/17	Contig	Cornell University	SAMN02741534	GCA_000726985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/985/GCA_000726985.1_ASM72698v1	-	FSL R8-6321
Bacillus cereus	1396	PRJNA274235	274235	Terrabacteria group	Firmicutes	5.5233	35.1	-	JYPF01	25	5942	5545	7/1/15	9/18/17	Scaffold	TU Muenchen	SAMN03325928	GCA_001044575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/575/GCA_001044575.1_ASM104457v1	26555390	14294-3 (M6)
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.51395	31.8	-	JWCD01	87	2459	2370	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197083	GCA_001070255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/255/GCA_001070255.1_ASM107025v1	26230489	1129_SEPI
Mycobacterium tuberculosis MD15430	1447494	PRJNA234610	234610	Terrabacteria group	Actinobacteria	4.38713	65.6	-	JLEM01	74	4313	4115	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584645	GCA_000650755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/755/GCA_000650755.1_Myco_tube_MD15430_V1	-	MD15430
Borreliella burgdorferi	139	PRJNA270494	270494	Spirochaetes	Spirochaetia	1.34118	28.4559	chromosome:NZ_CP019767.1/CP019767.1; plasmid p_cp26:NZ_CP019755.1/CP019755.1; plasmid p_cp32-1_1:NZ_CP019756.1/CP019756.1; plasmid p_cp32-2:NZ_CP019757.1/CP019757.1; plasmid p_cp32-3:NZ_CP019758.1/CP019758.1; plasmid p_cp32-4:NZ_CP019759.1/CP019759.1; plasmid p_cp32-9:NZ_CP019760.1/CP019760.1; plasmid p_lp17:NZ_CP019761.1/CP019761.1; plasmid p_lp28-1:NZ_CP019762.1/CP019762.1; plasmid p_lp36:NZ_CP019763.1/CP019763.1; plasmid p_lp38:NZ_CP019764.1/CP019764.1; plasmid p_lp54:NZ_CP019765.1/CP019765.1; plasmid p_lp56:NZ_CP019766.1/CP019766.1	-	13	1414	1299	5/19/17	5/24/17	Complete Genome	Bavarian Health and Food Safety Authority	SAMN06324250	GCA_002151505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/505/GCA_002151505.1_ASM215150v1	-	B31_NRZ
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07555	39.6	-	CNVA02	142	2273	2055	3/22/15	3/11/17	Contig	SC	SAMEA1032726	GCA_001083705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/705/GCA_001083705.2_6999_6_21	-	312942
Helicobacter pylori NQ352	981214	PRJEA62441	62441	Proteobacteria	delta/epsilon subdivisions	1.63915	39	-	CADG01	61	1619	1361	3/9/11	4/18/17	Contig	MHH Hannover Medical School	SAMEA2272230	GCA_000285115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/115/GCA_000285115.1_ASM28511v1	21383187	NQ352
Neisseria meningitidis 992008	1248732	PRJNA178630	178630	Proteobacteria	Betaproteobacteria	2.17584	51.8	-	APBS01	139	2492	2102	7/10/14	4/11/17	Contig	Academic Medical Center	SAMN02906913	GCA_000724735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/735/GCA_000724735.1_ASM72473v1	24932738	992008
Streptococcus pyogenes	1314	PRJNA231221	231221	Terrabacteria group	Firmicutes	1.76387	38.6	-	NBTO01	1	1768	1618	4/10/17	4/13/17	Contig	US Food and Drug Administration 	SAMN04875527	GCA_002083085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/085/GCA_002083085.1_ASM208308v1	-	FDAARGOS_190
Leptospira interrogans	173	PRJEB18875	360782	Spirochaetes	Spirochaetia	4.59467	35	-	FTNA01	57	4134	3741	1/14/17	4/10/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05421689	GCA_900156205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/205/GCA_900156205.1_IMG-taxon_2681812812_annotated_assembly	-	ATCC 43642
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.38774	66.4	-	JTPG01	63	6048	5871	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105685	GCA_000792425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/425/GCA_000792425.1_AZPAE14988	25367914	AZPAE14988
Acinetobacter baumannii Naval-78	903936	PRJNA53473	53473	Proteobacteria	Gammaproteobacteria	4.05338	39.2	-	AMFZ01	112	3977	3767	2/1/13	3/15/17	Contig	Walter Reed Army Institute of Research	SAMN00761247	GCA_000335675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/675/GCA_000335675.1_gacin49v1.0	-	Naval-78
Streptococcus agalactiae GB00957	1154961	PRJNA86595	86595	Terrabacteria group	Firmicutes	1.9785	35.2	-	ANQS01	29	2020	1912	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN02436254	GCA_000322925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/925/GCA_000322925.1_ASM32292v1	-	GB00957
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.15415	40.9	-	CEIW01	73	2134	1983	2/18/15	3/17/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234013	GCA_000947695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/695/GCA_000947695.1_Velvet_assembly	-	S14O
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.64103	38.3	-	FJDG01	37	3341	3190	2/20/16	3/27/17	Contig	SC	SAMEA2064367	GCA_900058575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/575/GCA_900058575.1_10771_3_19	-	2531STDY5467396
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.85264	50.7	-	CWUW01	390	5503	4628	7/16/15	2/24/17	Scaffold	SC	SAMEA3345063	GCA_001249275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/275/GCA_001249275.1_Sg_201312374_TCATTC_L001	-	201312374_1
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.0823	68.2	-	LWVZ01	262	7342	6746	1/31/17	4/29/17	Contig	Northern Arizona University	SAMN04208589	GCA_001976825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/825/GCA_001976825.1_ASM197682v1	-	RF6-BP15
Vibrio cholerae	666	PRJNA276892	276892	Proteobacteria	Gammaproteobacteria	4.01994	47.5	-	JZUA01	47	3867	3390	3/16/15	8/8/17	Contig	InDRE	SAMN03381398	GCA_000953755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/755/GCA_000953755.1_InDRE_4354	-	InDRE 4354
Clostridioides difficile	1496	PRJNA329109	329109	Terrabacteria group	Firmicutes	4.17994	28.8	-	MTVR01	4	3887	3673	1/26/17	3/22/17	Contig	Broad Institute	SAMN05504800	GCA_001972015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/015/GCA_001972015.1_ASM197201v1	-	20110270
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.06266	45.2	-	JNSW02	59	4807	4592	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741375	GCA_000707025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/025/GCA_000707025.2_ASM70702v2	"2,510,376,428,330,880"	CFSAN007439
Klebsiella pneumoniae CHS 34	1438740	PRJNA234203	234203	Proteobacteria	Gammaproteobacteria	5.97029	56.8	-	JMXI01	9	6036	5735	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581336	GCA_000693655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/655/GCA_000693655.1_Kleb_pneu_CHS_34_V1	-	CHS 34
Enterococcus faecalis EnGen0253	1158540	PRJNA88799	88799	Terrabacteria group	Firmicutes	3.24042	37.3	-	AIZQ01	38	3372	3170	5/3/13	3/23/17	Scaffold	Broad Institute	SAMN00809097	GCA_000396865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/865/GCA_000396865.1_Ente_faec_EnGen0253_V1	-	EnGen0253
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.05605	52.6	-	MBBS01	181	2411	2084	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04852999	GCA_001859335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/335/GCA_001859335.1_ASM185933v1	-	USO_NL11078
Enterococcus faecium U0317	547468	PRJNA30675	30675	Terrabacteria group	Firmicutes	2.89303	37.7	-	ABSW01	227	2989	2785	3/26/10	3/22/17	Contig	"Dept. of Medical Microbiology, University Medical Center Utrecht, Utrecht, The Netherlands"	SAMN02471515	GCA_000172915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/915/GCA_000172915.1_ASM17291v1	20398277	U0317
Campylobacter peloridis LMG 23910	1388753	PRJNA215651	215651	Proteobacteria	delta/epsilon subdivisions	1.76279	28.4457	chromosome:NZ_CP007766.1/CP007766.1; plasmid pPEL1:NZ_CP007767.1/CP007767.1; plasmid pPEL2:NZ_CP007768.1/CP007768.1	-	3	1740	1628	1/7/15	4/17/17	Complete Genome	"USDA, ARS"	SAMN03248547	GCA_000816785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/785/GCA_000816785.1_ASM81678v1	25381664	LMG 23910
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.17087	60	-	FCLH01	20	4872	4719	1/21/16	3/27/17	Scaffold	SC	SAMEA2274053	GCA_001540045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/045/GCA_001540045.1_12082_3_77	-	2880STDY5682981
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.64302	31.4	-	FBHW01	42	1689	1593	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683269	GCA_001488935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/935/GCA_001488935.1_UNOR581A	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.82065	55	-	FJXZ01	21	4602	4431	4/5/16	3/28/17	Scaffold	SC	SAMEA2273331	GCA_900075485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/485/GCA_900075485.1_11983_6_11	-	e1323
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.0488	64.2	-	FVHC01	33	5036	4897	3/10/17	3/18/17	Contig	SC	SAMEA2068962	GCA_900133315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/315/GCA_900133315.1_10250_1_38	-	378
Enterobacter hormaechei	158836	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.27121	55.2	-	NIBR01	4	5095	4872	6/6/17	6/8/17	Scaffold	Broad Institute	SAMN04521877	GCA_002174155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/155/GCA_002174155.1_ASM217415v1	-	BWH70
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.37672	67.2	-	MEAR01	65	6706	6275	11/18/16	6/27/17	Scaffold	Menzies School of Health Research	SAMN05712661	GCA_001882595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/595/GCA_001882595.1_ASM188259v1	-	MSMB0054
Pseudomonas sp. ACN8	1920428	PRJNA341585	341585	Proteobacteria	Gammaproteobacteria	6.34331	59.8	-	MRCS01	138	5834	5552	9/15/17	9/18/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05967358	GCA_002303925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/925/GCA_002303925.1_ASM230392v1	-	ACN8
Streptomyces sp. H-KF8	1727216	PRJNA317393	317393	Terrabacteria group	Actinobacteria	7.68489	72.1	-	LWAB01	11	6756	6284	6/20/16	3/13/17	Contig	Universidad del Desarrollo	SAMN04606695	GCA_001672315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/315/GCA_001672315.1_ASM167231v1	-	H-KF8
Streptomyces sp. EN23	212774	PRJNA341316	341316	Terrabacteria group	Actinobacteria	7.43811	71.6	-	MJAI01	131	6773	6304	9/25/16	3/13/17	Contig	"i3S, University of Porto"	SAMN05717680	GCA_001746305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/305/GCA_001746305.1_ASM174630v1	-	EN23
Pseudomonas sp. ACN5	1920427	PRJNA341585	341585	Proteobacteria	Gammaproteobacteria	6.68895	59.9	-	MRCP01	48	6255	5985	9/15/17	9/18/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN05954930	GCA_002303975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/975/GCA_002303975.1_ASM230397v1	-	ACN5
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.20584	67.3	-	MEAX01	65	6556	6162	11/18/16	3/28/17	Scaffold	Menzies School of Health Research	SAMN05712667	GCA_001882635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/635/GCA_001882635.1_ASM188263v1	-	MSMB0113
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	4.98103	55.1	-	BEEA01	269	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089454	GCA_002333465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/465/GCA_002333465.1_ASM233346v1	-	TUM10660
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.0142	64.2	-	FSDA01	18	4991	4848	12/14/16	3/21/17	Contig	SC	SAMEA2071457	GCA_900133325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/325/GCA_900133325.1_10250_1_39	-	379
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.05814	54.9	-	FJYB01	27	4994	4782	4/5/16	3/28/17	Scaffold	SC	SAMEA2273332	GCA_900075495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/495/GCA_900075495.1_11983_6_12	-	e1326
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75073	31.2	-	FBDH01	21	1841	1746	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683147	GCA_001488955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/955/GCA_001488955.1_EC4593	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.27931	59.9	-	FCLN01	20	5021	4858	1/21/16	3/27/17	Scaffold	SC	SAMEA2274062	GCA_001540065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/065/GCA_001540065.1_12082_3_84	-	2880STDY5682990
Clostridium perfringens	1502	PRJNA403823	403823	Terrabacteria group	Firmicutes	3.44692	28.4369	chromosome:NZ_CP023410.1/CP023410.1; plasmid pLLY_N11_1:NZ_CP023411.1/CP023411.1; plasmid pLLY_N11_2:NZ_CP023412.1/CP023412.1; plasmid pLLY_N11_3:NZ_CP023413.1/CP023413.1	-	4	3155	2980	9/19/17	9/21/17	Complete Genome	USDA-ARS	SAMN07624709	GCA_002312985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/985/GCA_002312985.1_ASM231298v1	-	LLY_N11
Enterococcus faecium E1039	645663	PRJNA38013	38013	Terrabacteria group	Firmicutes	2.50323	38	-	ACOS01	124	2587	2387	3/26/10	3/22/17	Contig	"Dept. of Medical Microbiology, University Medical Center Utrecht"	SAMN02471489	GCA_000174935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/935/GCA_000174935.1_ASM17493v1	20398277	E1039
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.03994	52.7	-	MBBT01	156	2366	2070	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853000	GCA_001859365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/365/GCA_001859365.1_ASM185936v1	-	USO_NL11143
Enterococcus faecalis EnGen0232	1158542	PRJNA88803	88803	Terrabacteria group	Firmicutes	3.20746	37.3	-	AIZS01	40	3345	3142	5/3/13	3/24/17	Scaffold	Broad Institute	SAMN00809119	GCA_000396905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/905/GCA_000396905.1_Ente_faec_UAA948_V1	-	UAA948
Klebsiella pneumoniae CHS 35	1438741	PRJNA234204	234204	Proteobacteria	Gammaproteobacteria	5.90576	56.9	-	JMXJ01	13	5986	5702	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581337	GCA_000693675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/675/GCA_000693675.1_Kleb_pneu_CHS_35_V1	-	CHS 35
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.19418	45.2	-	JNTW02	48	5026	4812	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741348	GCA_000707045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/045/GCA_000707045.2_ASM70704v2	"2,510,376,428,330,880"	CFSAN001611
Clostridioides difficile	1496	PRJNA329109	329109	Terrabacteria group	Firmicutes	4.27963	28.7	-	MTVS01	9	4008	3794	1/26/17	3/22/17	Contig	Broad Institute	SAMN05504814	GCA_001972045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/045/GCA_001972045.1_ASM197204v1	-	20110740
Vibrio cholerae	666	PRJNA276831	276831	Proteobacteria	Gammaproteobacteria	4.01989	47.5	-	JZUB01	52	3882	3402	3/16/15	8/8/17	Contig	InDRE	SAMN03381198	GCA_000953775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/775/GCA_000953775.1_InDRE_4262	-	InDRE 4262
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.03981	68.2	-	LWWB01	147	7278	6749	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208591	GCA_001976865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/865/GCA_001976865.1_ASM197686v1	-	RF8-BP2
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.85376	50.7	-	CWVE01	398	5457	4669	7/16/15	2/24/17	Scaffold	SC	SAMEA3345070	GCA_001249295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/295/GCA_001249295.1_Sg_201400049_GCCAAT_L001	-	201400049_1
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.3401	38.3	-	FJFO01	20	3062	2963	2/20/16	3/27/17	Contig	SC	SAMEA2077537	GCA_900058585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/585/GCA_900058585.1_10625_2_49	-	2532STDY5467522
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.12921	41.1	-	CEIB01	128	2146	2009	2/18/15	3/17/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3234003	GCA_000947715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/715/GCA_000947715.1_Velvet_assembly	-	S13D
Streptococcus agalactiae GB00963	1154963	PRJNA86599	86599	Terrabacteria group	Firmicutes	2.04932	35.2	-	ANQR01	35	2122	1962	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN02436253	GCA_000322945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/945/GCA_000322945.1_ASM32294v1	-	GB00963
Acinetobacter baumannii AB4A3	1222032	PRJNA172836	172836	Proteobacteria	Gammaproteobacteria	4.10407	38.9	-	AOLU01	136	4052	3805	2/8/13	3/15/17	Contig	The University of Hong Kong	SAMN02471175	GCA_000338835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/338/835/GCA_000338835.1_454	23723398	AB4A3
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.54937	66.2	-	JTPF01	76	6220	6014	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105686	GCA_000792445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/445/GCA_000792445.1_AZPAE14989	25367914	AZPAE14989
Leptospira interrogans serovar Zanoni str. LT2156	1001601	PRJNA65073	65073	Spirochaetes	Spirochaetia	4.88646	35.1	-	AFMF02	41	5316	5269	6/7/11	11/19/13	Contig	J. Craig Venter Institute	SAMN00255261	GCA_000216115.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/115/GCA_000216115.3_gls454158v02	-	LT2156
Streptococcus pyogenes	1314	PRJNA359497	359497	Terrabacteria group	Firmicutes	1.86406	38.4	-	MTSW01	60	1932	1811	4/28/17	5/3/17	Contig	Purdue University	SAMN06192242	GCA_002114055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/055/GCA_002114055.1_ASM211405v1	-	M3KCL
Neisseria meningitidis	487	PRJNA257242	257242	Proteobacteria	Betaproteobacteria	2.19038	51.7	-	JPTA01	102	2535	2206	10/6/14	3/21/17	Contig	Army Medical and Veterinary Research Center	SAMN02949640	GCA_000763745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/745/GCA_000763745.1_ASM76374v1	25477415	-
Helicobacter pylori NQ392	981216	PRJEA62445	62445	Proteobacteria	delta/epsilon subdivisions	1.65499	38.9	-	CADI01	80	1623	1469	3/9/11	3/23/17	Contig	MHH Hannover Medical School	SAMEA2272151	GCA_000285155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/155/GCA_000285155.1_ASM28515v1	21383187	NQ392
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.05493	39.7	-	CMNZ01	59	2286	2043	3/23/15	3/11/17	Contig	SC	SAMEA2061492	GCA_001084025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/025/GCA_001084025.1_9803_7_18	-	19F
Mycoplasma hyopneumoniae	2099	PRJNA396462	396462	Terrabacteria group	Tenericutes	0.964503	28.4	chromosome:NZ_CP022714.1/CP022714.1	-	1	790	526	8/16/17	8/17/17	Complete Genome	"KBNP,INC."	SAMN07426830	GCA_002257505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/505/GCA_002257505.1_ASM225750v1	-	KM014
Mycobacterium tuberculosis MD17232	1447495	PRJNA234611	234611	Terrabacteria group	Actinobacteria	4.38785	65.6	-	JLEL01	87	4325	4117	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584646	GCA_000650775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/775/GCA_000650775.1_Myco_tube_MD17232_V1	-	MD17232
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.48553	31.9	-	JWBO01	105	2429	2325	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197098	GCA_001070315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/315/GCA_001070315.1_ASM107031v1	26230489	1142_SEPI
Bacillus cereus	1396	PRJNA274235	274235	Terrabacteria group	Firmicutes	5.22636	35.2	-	JYPL01	320	5764	5419	7/1/15	8/28/17	Scaffold	TU Muenchen	SAMN03325935	GCA_001044585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/585/GCA_001044585.1_ASM104458v1	26555390	HWW 274-2
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.12393	37.9	-	JOZA01	31	3165	3075	7/15/14	2/26/17	Contig	Cornell University	SAMN02741535	GCA_000726995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/726/995/GCA_000726995.1_ASM72699v1	-	FSL R8-6341
Yersinia pestis YN472	755972	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.52567	47.5	-	ADTH01	1105	4437	4028	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403107	GCA_000325465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/465/GCA_000325465.1_ASM32546v1	23271803	YN472
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.63808	30.4	-	CUJK01	15	1724	1595	3/31/15	3/18/17	Contig	SC	SAMEA1010653	GCA_001226005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/005/GCA_001226005.1_7038_3_52	-	OXC6302
Sneathia amnii	187101	PRJNA276758	276758	Fusobacteria	Fusobacteriia	1.33022	28.4	chromosome:NZ_CP011280.1/CP011280.1	-	1	1304	1234	4/17/15	4/17/17	Complete Genome	Vaginal Human Microbiome Consortium	SAMN03380727	GCA_000973085.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/085/GCA_000973085.1_ASM97308v1	23281612	SN35
Staphylococcus aureus M0528	1158682	PRJNA88663	88663	Terrabacteria group	Firmicutes	2.95934	32.9	-	AIXB01	17	3106	2936	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809030	GCA_000361405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/405/GCA_000361405.1_Stap_aure_M0528_V1	-	M0528
Staphylococcus aureus M0529	1158462	PRJNA88727	88727	Terrabacteria group	Firmicutes	2.93128	33	-	AIYH01	7	3063	2899	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809072	GCA_000361425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/425/GCA_000361425.1_Stap_aure_M0529_V1	-	M0529
Mycoplasma gallinaceum	29556	PRJNA277900	277900	Terrabacteria group	Tenericutes	0.845307	28.4	chromosome:CP011021.1	-	1	631	571	3/30/15	5/27/15	Complete Genome	"Faculty of Veterinary Science, University of Pretoria"	SAMN03398459	GCA_000965765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/765/GCA_000965765.1_ASM96576v1	-	B2096 8B
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.72695	30.3	-	CUKE01	18	1831	1710	3/31/15	3/18/17	Contig	SC	SAMEA1010310	GCA_001226025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/025/GCA_001226025.1_7038_3_70	-	OXC6320
Yersinia pestis YN663	755973	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.20325	48	-	ADTI01	1285	4025	3674	12/7/12	5/19/17	Contig	Beijing Genomics Institute	SAMN02403108	GCA_000325485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/485/GCA_000325485.1_ASM32548v1	23271803	YN663
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	2.88856	37.9	-	JOXP01	17	2918	2817	7/15/14	2/26/17	Contig	Cornell University	SAMN02741498	GCA_000727015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/015/GCA_000727015.1_ASM72701v1	-	FSL R8-5775
Bacillus cereus	1396	PRJNA274235	274235	Terrabacteria group	Firmicutes	5.28529	35.3	-	JYPJ01	115	5665	5339	7/1/15	8/28/17	Scaffold	TU Muenchen	SAMN03325933	GCA_001044635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/635/GCA_001044635.1_ASM104463v1	26555390	F4429-71
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.45663	32	-	JVXA01	99	2390	2290	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197216	GCA_001070395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/395/GCA_001070395.1_ASM107039v1	26230489	125_SEPI
Mycobacterium tuberculosis MD15956	1447496	PRJNA234613	234613	Terrabacteria group	Actinobacteria	4.41568	65.6	-	JLEK01	102	4360	4136	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584647	GCA_000650795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/795/GCA_000650795.1_Myco_tube_MD15956_V1	-	MD15956
Borrelia garinii SZ	1421551	PRJNA230868	230868	Spirochaetes	Spirochaetia	0.902487	28.4	chromosome:NZ_CP007564.1/CP007564.1	-	1	853	805	5/15/14	4/2/17	Complete Genome	"lanzhou veterinary research institute,chinese academy of agricultural sciences"	SAMN02402355	GCA_000691545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/545/GCA_000691545.1_ASM69154v1	-	SZ
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.0777	39.6	-	CMGS01	40	2289	2031	3/23/15	3/11/17	Contig	SC	SAMEA1029256	GCA_001084045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/045/GCA_001084045.1_7038_4_8	-	SMRU2936
Helicobacter pylori NQ1707	981217	PRJEA62447	62447	Proteobacteria	delta/epsilon subdivisions	1.65474	38.9	-	CADJ01	91	1629	1490	3/9/11	3/23/17	Contig	MHH Hannover Medical School	SAMEA2272498	GCA_000285175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/175/GCA_000285175.1_ASM28517v1	21383187	NQ1707
Neisseria meningitidis	487	PRJNA260372	260372	Proteobacteria	Betaproteobacteria	2.22323	51.6	-	JRET01	10	2594	2191	11/17/14	3/21/17	Contig	University of Pittsburgh	SAMN03020379	GCA_000785065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/065/GCA_000785065.1_ASM78506v1	-	NM3687
Streptococcus pyogenes	1314	PRJNA381156	381156	Terrabacteria group	Firmicutes	1.80578	38.4	-	NBYS01	25	1851	1757	4/28/17	6/8/17	Contig	UNIVERSIDADE FEDERAL DE CIENCIAS DA SAUDE DE PORTO ALEGRE	SAMN06671863	GCA_002115435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/435/GCA_002115435.1_ASM211543v1	-	SC05
Leptospira interrogans serovar Grippotyphosa str. LT2186	1001599	PRJNA65067	65067	Spirochaetes	Spirochaetia	4.84529	35.1	-	AFME02	438	5671	5626	6/7/11	11/19/13	Contig	J. Craig Venter Institute	SAMN00255260	GCA_000216135.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/135/GCA_000216135.3_gls454151v02	-	LT2186
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.80914	66.1	-	JTPE01	100	6588	6361	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105687	GCA_000792465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/465/GCA_000792465.1_AZPAE14990	25367914	AZPAE14990
Acinetobacter baumannii MSP4-16	1278070	PRJNA185251	185251	Proteobacteria	Gammaproteobacteria	3.94454	39.1	-	AODW01	53	3797	3664	2/26/13	3/15/17	Contig	"Institute of Microbial Technology (IMTECH), Chandigarh, India 160036"	SAMN02469980	GCA_000341985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/985/GCA_000341985.1_Whole_genome_assembly	23558533	MSP4-16
Streptococcus agalactiae GB01003	1154970	PRJNA86613	86613	Terrabacteria group	Firmicutes	2.03786	35.2	-	ANQO01	21	2087	1978	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN02436307	GCA_000322965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/965/GCA_000322965.1_ASM32296v1	-	GB01003
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.08515	41.2	-	CEKN01	71	2099	1992	2/18/15	3/17/17	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233998	GCA_000947775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/775/GCA_000947775.1_Velvet_assembly	-	S12Y
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.4128	38.3	-	FJGC01	25	3124	3015	2/20/16	3/27/17	Contig	SC	SAMEA2077740	GCA_900058595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/595/GCA_900058595.1_10625_2_54	-	2532STDY5467527
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.7447	50.5	-	CWWY01	564	5584	4455	7/16/15	2/24/17	Scaffold	SC	SAMEA2434364	GCA_001249335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/335/GCA_001249335.1_12830_1_37	-	KY 913
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.0047	68.2	-	LWWC01	214	7273	6666	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208592	GCA_001976885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/885/GCA_001976885.1_ASM197688v1	-	RF8-BP5
Vibrio cholerae O1 biovar El Tor	686	PRJNA278330	278330	Proteobacteria	Gammaproteobacteria	4.04001	47.6	-	LAEM01	120	3811	3367	3/23/15	8/8/17	Contig	"Russian Research Anti-plague Institute ""Microbe"""	SAMN03417811	GCA_000960915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/915/GCA_000960915.1_ASM96091v1	-	M1429
Clostridioides difficile	1496	PRJNA329109	329109	Terrabacteria group	Firmicutes	4.05797	28.7	-	MTWE01	5	3775	3533	1/26/17	3/21/17	Contig	Broad Institute	SAMN05504806	GCA_001972065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/065/GCA_001972065.1_ASM197206v1	-	20120183
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	4.97844	45.4	-	JNTB02	45	4767	4579	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741380	GCA_000707065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/065/GCA_000707065.2_ASM70706v2	"2,510,376,428,330,880"	CFSAN007444
Klebsiella pneumoniae CHS 36	1438742	PRJNA234205	234205	Proteobacteria	Gammaproteobacteria	5.8725	56.9	-	JMXK01	11	5968	5687	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581338	GCA_000693695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/695/GCA_000693695.1_Kleb_pneu_CHS_36_V1	-	CHS 36
Enterococcus faecalis EnGen0233	1158546	PRJNA88811	88811	Terrabacteria group	Firmicutes	2.95195	37.5	-	AIZW01	24	3038	2874	5/3/13	3/24/17	Scaffold	Broad Institute	SAMN00809144	GCA_000396985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/396/985/GCA_000396985.1_Ente_faec_UAA1014_V1	-	UAA1014
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.11954	52.4	-	MBBU01	175	2447	2141	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853001	GCA_001859385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/385/GCA_001859385.1_ASM185938v1	-	USO_DK12-16
Enterococcus faecium D344SRF	565665	PRJNA32079	32079	Terrabacteria group	Firmicutes	2.74534	37.9	-	ACZZ01	215	2897	2607	2/18/10	3/22/17	Contig	Broad Institute	SAMN02595363	GCA_000176295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/295/GCA_000176295.1_EFCS_D344SRF_V1	-	D344SRF
Borrelia garinii NMJW1	1234596	PRJNA175615	175615	Spirochaetes	Spirochaetia	0.902789	28.4	chromosome:NC_018747.1/CP003866.1	-	1	854	804	9/28/12	3/30/17	Complete Genome	State Key Laboratory of Pathogen and Biosecurity	SAMN02603884	GCA_000300045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/045/GCA_000300045.1_ASM30004v1	23144406	NMJW1
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.18363	59.9	-	FCMJ01	12	4929	4775	1/21/16	3/27/17	Scaffold	SC	SAMEA2273997	GCA_001540085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/085/GCA_001540085.1_12082_5_40	-	2880STDY5682925
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65473	31.4	-	FBPM01	13	1702	1607	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683468	GCA_001488975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/975/GCA_001488975.1_H093960099	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.86978	55.5	-	FJYC01	51	4789	4547	4/5/16	3/28/17	Scaffold	SC	SAMEA2273498	GCA_900075505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/505/GCA_900075505.1_12045_5_71	-	e1331
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.08324	64.1	-	FVHB01	18	5078	4978	3/10/17	3/18/17	Contig	SC	SAMEA2068964	GCA_900133345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/345/GCA_900133345.1_10250_1_44	-	384
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	4.97346	55.2	-	BEEB01	377	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089455	GCA_002333485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/485/GCA_002333485.1_ASM233348v1	-	TUM10661
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.08869	67.1	-	MEAV01	384	6761	5874	11/18/16	6/28/17	Scaffold	Menzies School of Health Research	SAMN05712665	GCA_001882645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/645/GCA_001882645.1_ASM188264v1	-	MSMB0106
Pseudomonas sp. HAR-UPW-AIA-41	1985301	PRJNA400690	400690	Proteobacteria	Gammaproteobacteria	3.71977	62.3	-	NSLB01	58	3542	3399	9/6/17	9/18/17	Contig	 CSIR-IMTECH	SAMN07572862	GCA_002304225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/225/GCA_002304225.1_ASM230422v1	-	HAR-UPW-AIA-41
Streptomyces sp. CC77	1906739	PRJNA345367	345367	Terrabacteria group	Actinobacteria	6.81202	73.5	-	MKXA01	876	6179	5586	11/2/16	3/14/17	Contig	CINVESTAV-Langebio	SAMN05861225	GCA_001865255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/255/GCA_001865255.1_ASM186525v1	-	CC77
Streptomyces sp. MUSC 93	1428652	PRJNA343843	343843	Terrabacteria group	Actinobacteria	7.01508	69.9	-	MLYP01	166	6424	5921	11/4/16	3/14/17	Contig	Monash University Malaysia	SAMN05915828	GCA_001866645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/645/GCA_001866645.1_ASM186664v1	-	MUSC 93
Pseudomonas sp. MT5	170540	PRJNA406957	406957	Proteobacteria	Gammaproteobacteria	4.32274	61.2	-	NTMR01	79	4042	3921	9/17/17	9/19/17	Contig	Shanghai Ocean University	SAMN07634961	GCA_002307495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/495/GCA_002307495.1_ASM230749v1	-	MT5
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.34736	67	-	MEAZ01	353	6901	5977	11/18/16	6/28/17	Scaffold	Menzies School of Health Research	SAMN05712669	GCA_001882705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/705/GCA_001882705.1_ASM188270v1	-	MSMB0145
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	4.91257	55.1	-	BEEC01	152	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089456	GCA_002333505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/505/GCA_002333505.1_ASM233350v1	-	TUM10662
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96346	64.2	-	FVHI01	17	4901	4761	3/10/17	3/18/17	Contig	SC	SAMEA2068963	GCA_900133355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/355/GCA_900133355.1_10250_1_41	-	381
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.10126	54.9	-	FJYD01	55	5061	4789	4/5/16	3/28/17	Scaffold	SC	SAMEA2273333	GCA_900075515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/515/GCA_900075515.1_11983_6_13	-	e1333
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.80246	31	-	FBGH01	62	1833	1714	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683227	GCA_001489015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/015/GCA_001489015.1_M4A4	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.36889	59.8	-	FCIS01	23	5145	4976	1/21/16	3/27/17	Scaffold	SC	SAMEA2273975	GCA_001540105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/105/GCA_001540105.1_12082_3_10	-	2880STDY5682902
Arcobacter nitrofigilis DSM 7299	572480	PRJNA32593	32593	Proteobacteria	delta/epsilon subdivisions	3.19224	28.4	chromosome:NC_014166.1/CP001999.1	-	1	3170	3086	5/17/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN02598489	GCA_000092245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/245/GCA_000092245.1_ASM9224v1	21304714	DSM 7299
Enterococcus faecium PC4.1	791161	PRJNA42757	42757	Terrabacteria group	Firmicutes	2.81116	38	-	ADMM01	78	2804	2585	3/30/10	3/22/17	Contig	J. Craig Venter Institute	SAMN00014270	GCA_000178235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/235/GCA_000178235.1_ASM17823v1	24503986	PC4.1
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.11386	52.4	-	MBBV01	172	2447	2148	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853002	GCA_001859405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/405/GCA_001859405.1_ASM185940v1	-	USO_DK12-21
Enterococcus faecalis V583	226185	PRJNA82565	82565	Terrabacteria group	Firmicutes	3.3298	37.4	-	AHYN01	9	3512	3357	5/31/13	3/24/17	Scaffold	Broad Institute	SAMN02596965	GCA_000407045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/045/GCA_000407045.1_Ente_faec_V583_V1	-	V583
Klebsiella pneumoniae CHS 37	1438743	PRJNA234206	234206	Proteobacteria	Gammaproteobacteria	5.90195	56.9	-	JMXL01	11	5991	5688	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581339	GCA_000693715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/715/GCA_000693715.1_Kleb_pneu_CHS_37_V1	-	CHS 37
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.18372	45.2	-	JNUL02	47	5000	4785	6/13/14	3/20/17	Contig	FDA/CFSAN	SAMN02741393	GCA_000707085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/085/GCA_000707085.2_ASM70708v2	26994080	CFSAN007457
Clostridioides difficile	1496	PRJNA329109	329109	Terrabacteria group	Firmicutes	4.09249	28.6	-	MTVY01	2	3749	3553	1/26/17	3/22/17	Contig	Broad Institute	SAMN05504813	GCA_001972085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/085/GCA_001972085.1_ASM197208v1	-	20110995
Vibrio cholerae	666	PRJNA278329	278329	Proteobacteria	Gammaproteobacteria	4.0105	47.5	-	LAED01	89	3844	3528	3/24/15	3/25/17	Contig	"Russian Research Anti-plague Institute ""Microbe"""	SAMN03417810	GCA_000961975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/975/GCA_000961975.1_ASM96197v1	-	D-35
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.055	68.2	-	LWWF01	379	7376	6733	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208595	GCA_001976895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/895/GCA_001976895.1_ASM197689v1	-	RF49-BP2
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.95016	50.5	-	CXAI01	511	5513	4711	7/16/15	2/24/17	Scaffold	SC	SAMEA2445760	GCA_001249355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/355/GCA_001249355.1_12971_8_69	-	H134560191
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.53816	38.3	-	FJJL01	59	3237	3090	2/20/16	3/27/17	Contig	SC	SAMEA2077785	GCA_900058605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/605/GCA_900058605.1_10625_2_90	-	2532STDY5467563
Streptococcus suis	1307	PRJNA279995	279995	Terrabacteria group	Firmicutes	2.11254	41.3	-	LDOI01	124	2301	2003	9/17/15	3/18/17	Contig	USDA-ARS	SAMN03485886	GCA_001293215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/215/GCA_001293215.1_Ssuis26-14_v1.0	26543125	ISU2614
Streptococcus agalactiae MRI Z1-202	1154839	PRJNA86337	86337	Terrabacteria group	Firmicutes	1.96844	35.5	-	ANQK01	18	2010	1880	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN02436191	GCA_000322985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/985/GCA_000322985.1_ASM32298v1	-	MRI Z1-202
Acinetobacter baumannii AB1H8	1222031	PRJNA172835	172835	Proteobacteria	Gammaproteobacteria	3.99378	39	-	ANNC01	69	3891	3720	2/26/13	3/15/17	Contig	The University of Hong Kong	SAMN02471174	GCA_000342065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/065/GCA_000342065.1_454	23723398	AB1H8
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.46761	66.3	-	JTPD01	93	6148	5953	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105688	GCA_000792475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/475/GCA_000792475.1_AZPAE14991	25367914	AZPAE14991
Leptospira interrogans serovar Copenhageni str. LT2050	1001598	PRJNA65065	65065	Spirochaetes	Spirochaetia	4.46466	35.2	-	AFMD02	584	5440	5396	6/7/11	11/19/13	Contig	J. Craig Venter Institute	SAMN00255258	GCA_000216155.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/155/GCA_000216155.3_gls454150v02	-	LT2050
Streptococcus pyogenes	1314	PRJNA381156	381156	Terrabacteria group	Firmicutes	1.86122	38.3	-	NBYT01	22	1920	1795	4/28/17	6/8/17	Contig	UNIVERSIDADE FEDERAL DE CIENCIAS DA SAUDE DE PORTO ALEGRE	SAMN06671861	GCA_002115465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/465/GCA_002115465.1_ASM211546v1	-	WB155
Neisseria meningitidis	487	PRJNA260375	260375	Proteobacteria	Betaproteobacteria	2.19896	51.7	-	JREU01	2	2561	2195	11/17/14	3/21/17	Contig	University of Pittsburgh	SAMN03020452	GCA_000785075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/075/GCA_000785075.1_ASM78507v1	-	NM3681
Helicobacter pylori NQ4060	981218	PRJEA62449	62449	Proteobacteria	delta/epsilon subdivisions	1.64974	38.9	-	CADK01	59	1622	1446	3/9/11	3/23/17	Contig	MHH Hannover Medical School	SAMEA2271996	GCA_000285195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/195/GCA_000285195.1_ASM28519v1	21383187	NQ4060
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.20569	39.6	-	CKQG01	55	2423	2205	3/21/15	3/11/17	Contig	SC	SAMEA1024989	GCA_001084145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/145/GCA_001084145.1_6680_6_24	-	SMRU960
Clostridium perfringens ATCC 13124	195103	PRJNA304	304	Terrabacteria group	Firmicutes	3.25668	28.4	chromosome:NC_008261.1/CP000246.1	-	1	2948	2801	7/25/06	4/6/17	Complete Genome	TIGR	SAMN02604008	GCA_000013285.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/285/GCA_000013285.1_ASM1328v1	16825665	ATCC 13124
Mycobacterium tuberculosis MD15977	1447497	PRJNA234614	234614	Terrabacteria group	Actinobacteria	4.40124	65.6	-	JLEJ01	74	4320	4122	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584648	GCA_000650815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/815/GCA_000650815.1_Myco_tube_MD15977_V1	-	MD15977
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.47725	31.8	-	JVVN01	96	2419	2307	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197255	GCA_001070415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/415/GCA_001070415.1_ASM107041v1	26230489	1284_SEPI
Bacillus cereus	1396	PRJNA274235	274235	Terrabacteria group	Firmicutes	5.71497	35.1	-	JYPI01	64	5981	5651	7/1/15	8/28/17	Scaffold	TU Muenchen	SAMN03325932	GCA_001044645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/645/GCA_001044645.1_ASM104464v1	26555390	F3175-03
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09526	37.9	-	JOXX01	18	3146	3044	7/15/14	2/26/17	Contig	Cornell University	SAMN02741506	GCA_000727045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/045/GCA_000727045.1_ASM72704v1	-	FSL R8-5866
Yersinia pestis G1670E	1325475	PRJNA38409	38409	Proteobacteria	Gammaproteobacteria	4.53202	47.6	-	AOMY01	214	4295	4006	4/25/13	3/23/17	Contig	University of Florida	SAMN01902219	GCA_000382505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/505/GCA_000382505.1_Yersinia_pestis_G1670E_assembly	23521061	G1670E
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.62682	30.5	-	CUKS01	19	1700	1593	3/31/15	3/18/17	Contig	SC	SAMEA1010533	GCA_001226045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/045/GCA_001226045.1_7038_3_83	-	OXC6333
Clostridium perfringens	1502	PRJNA259939	259939	Terrabacteria group	Firmicutes	3.39511	28.3817	chromosome:NZ_CP009557.1/CP009557.1; plasmid pFORC3:NZ_CP009558.1/CP009558.1	-	2	3077	2907	10/1/15	4/4/17	Complete Genome	"Food-borne Pathogen Omics Research Center, FORC"	SAMN03140316	GCA_001304735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/304/735/GCA_001304735.1_ASM130473v1	-	FORC_003
Staphylococcus aureus M0531	1158683	PRJNA88665	88665	Terrabacteria group	Firmicutes	2.87133	32.8	-	AIXC01	4	3000	2859	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809041	GCA_000361445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/445/GCA_000361445.1_Stap_aure_M0531_V1	-	M0531
Staphylococcus aureus M0536	1158684	PRJNA88667	88667	Terrabacteria group	Firmicutes	2.8746	32.9	-	AIXD01	4	2991	2817	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809052	GCA_000361465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/465/GCA_000361465.1_Stap_aure_M0536_V1	-	M0536
Borreliella chilensis	1245910	PRJNA266551	266551	Spirochaetes	Spirochaetia	0.982238	28.37	chromosome:CP009910.1; plasmid cp26:CP009911.1; plasmid lp54:CP009912.1	-	3	940	898	12/29/14	9/21/17	Complete Genome	New York Medical College	SAMN03166165	GCA_000808095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/095/GCA_000808095.1_ASM80809v1	-	VA1
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.71015	30.3	-	CULT01	13	1799	1678	3/31/15	3/18/17	Contig	SC	SAMEA1010279	GCA_001226065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/065/GCA_001226065.1_7065_7_20	-	OXC6366
Yersinia pestis G1670A	1291550	PRJNA188780	188780	Proteobacteria	Gammaproteobacteria	4.54244	47.6	-	AOSA01	208	4306	4024	4/25/13	3/23/17	Contig	US Army Edgewood Chemical Biological Center	SAMN01909378	GCA_000382545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/545/GCA_000382545.1_Yersinia_pestis_assembly	23521061	G1670A
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.06377	37.9	-	JOXR01	19	3106	3012	7/15/14	2/26/17	Contig	Cornell University	SAMN02741500	GCA_000727065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/065/GCA_000727065.1_ASM72706v1	-	FSL R8-5797
Bacillus cereus	1396	PRJNA274235	274235	Terrabacteria group	Firmicutes	6.06994	34.9	-	LABH01	61	6306	5905	7/1/15	8/28/17	Scaffold	TU Muenchen	SAMN03325936	GCA_001044655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/655/GCA_001044655.1_ASM104465v1	26555390	INRA A3
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.40253	31.9	-	JVUG01	145	2343	2247	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197288	GCA_001070535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/535/GCA_001070535.1_ASM107053v1	26230489	1311_SEPI
Mycobacterium tuberculosis MD15770	1447498	PRJNA234616	234616	Terrabacteria group	Actinobacteria	4.36031	65.5	-	JLEI01	91	4320	4100	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584649	GCA_000650835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/835/GCA_000650835.1_Myco_tube_MD15770_V1	-	MD15770
Borreliella burgdorferi	139	PRJNA270494	270494	Spirochaetes	Spirochaetia	1.28811	28.3615	chromosome:NZ_CP019844.1/CP019844.1; plasmid cp26:NZ_CP019845.1/CP019845.1; plasmid cp32-1:NZ_CP019846.1/CP019846.1; plasmid cp32-3:NZ_CP019847.1/CP019847.1; plasmid cp32-4:NZ_CP019848.1/CP019848.1; plasmid cp32-5:NZ_CP019849.1/CP019849.1; plasmid cp32-9:NZ_CP019850.1/CP019850.1; plasmid lp17:NZ_CP019851.1/CP019851.1; plasmid lp36:NZ_CP019852.1/CP019852.1; plasmid lp38:NZ_CP019853.1/CP019853.1; plasmid lp54:NZ_CP019854.1/CP019854.1; plasmid lp56:NZ_CP019855.1/CP019855.1	-	12	1342	1231	5/19/17	5/24/17	Complete Genome	Bavarian Health and Food Safety Authority	SAMN03269135	GCA_002151465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/465/GCA_002151465.1_ASM215146v1	-	PAli
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.21402	39.4	-	CLLO01	78	2437	2193	3/21/15	3/11/17	Contig	SC	SAMEA1029063	GCA_001084265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/265/GCA_001084265.1_6938_6_11	-	SMRU2675
Helicobacter pylori NQ1671	981220	PRJEA62453	62453	Proteobacteria	delta/epsilon subdivisions	1.62695	39.1	-	CADM01	38	1605	1461	3/9/11	3/23/17	Contig	MHH Hannover Medical School	SAMEA2272392	GCA_000285235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/235/GCA_000285235.1_ASM28523v1	21383187	NQ1671
Neisseria meningitidis	487	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	2.22258	49.5	-	JUTT01	122	2199	2057	7/10/15	3/17/17	Contig	University of Washington	SAMN03197977	GCA_001066195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/195/GCA_001066195.1_ASM106619v1	26230489	768_NMEN
Streptococcus pyogenes	1314	PRJNA381156	381156	Terrabacteria group	Firmicutes	1.8064	38.3	-	NBYU01	38	1804	1688	4/28/17	6/8/17	Contig	UNIVERSIDADE FEDERAL DE CIENCIAS DA SAUDE DE PORTO ALEGRE	SAMN06671862	GCA_002115485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/485/GCA_002115485.1_ASM211548v1	-	WB151
Leptospira interrogans serovar Canicola str. LT1962	1001597	PRJNA65063	65063	Spirochaetes	Spirochaetia	4.70526	35	-	AFMC02	16	4671	4629	6/7/11	11/19/13	Contig	J. Craig Venter Institute	SAMN00255265	GCA_000216175.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/175/GCA_000216175.3_gls454148v02	-	LT1962
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.51	66.3	-	JTPC01	124	6217	5986	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105689	GCA_000792505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/505/GCA_000792505.1_AZPAE14992	25367914	AZPAE14992
Acinetobacter baumannii AB405E4	1222033	PRJNA172837	172837	Proteobacteria	Gammaproteobacteria	3.65349	39	-	ANND01	139	3636	3324	2/26/13	3/15/17	Contig	The University of Hong Kong	SAMN02471180	GCA_000342085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/085/GCA_000342085.1_454	-	AB405E4
Streptococcus agalactiae MRI Z1-204	1154841	PRJNA86341	86341	Terrabacteria group	Firmicutes	2.00754	35.2	-	ANQI01	18	2071	1954	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN02436212	GCA_000323005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/005/GCA_000323005.1_ASM32300v1	-	MRI Z1-204
Streptococcus suis	1307	PRJNA279995	279995	Terrabacteria group	Firmicutes	2.07523	41.3	-	LDOG01	110	2227	1947	9/17/15	3/18/17	Contig	USDA-ARS	SAMN03485884	GCA_001293235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/235/GCA_001293235.1_Ssuis24-14_v1.0	26543125	ISU2414
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.58367	38.2	-	FJAZ01	37	3300	3146	2/20/16	3/27/17	Contig	SC	SAMEA2058276	GCA_900058805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/805/GCA_900058805.1_10771_1_10	-	2531STDY5467291
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.76155	50.7	-	CXMV01	388	5390	4601	7/16/15	2/24/17	Scaffold	SC	SAMEA2055831	GCA_001249375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/375/GCA_001249375.1_9870_6_31	-	143779
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.12899	68.2	-	LWWD01	121	7389	6816	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208593	GCA_001976905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/905/GCA_001976905.1_ASM197690v1	-	RF43-BP22
Vibrio cholerae O1 biovar El Tor	686	PRJNA263386	263386	Proteobacteria	Gammaproteobacteria	4.02025	47.5	-	JRTW01	137	3843	3475	3/27/15	3/26/17	Contig	RARI	SAMN03100020	GCA_000965285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/285/GCA_000965285.1_ASM96528v1	-	R17644
Clostridioides difficile	1496	PRJNA329109	329109	Terrabacteria group	Firmicutes	4.20012	28.6	-	MTVZ01	3	3934	3730	1/26/17	3/22/17	Contig	Broad Institute	SAMN05504809	GCA_001972105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/105/GCA_001972105.1_ASM197210v1	-	20111003
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.08138	45.2	-	JNTA02	48	4852	4642	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741379	GCA_000707105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/105/GCA_000707105.2_ASM70710v2	"2,510,376,428,330,880"	CFSAN007443
Klebsiella pneumoniae CHS 38	1438744	PRJNA234207	234207	Proteobacteria	Gammaproteobacteria	5.86426	56.9	-	JMXM01	18	5965	5683	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581340	GCA_000693735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/735/GCA_000693735.1_Kleb_pneu_CHS_38_V1	-	CHS 38
Enterococcus faecalis V583	226185	PRJNA191892	191892	Terrabacteria group	Firmicutes	3.36431	37.4	-	ASWP01	9	3568	3401	5/31/13	3/24/17	Scaffold	Broad Institute	SAMN02596965	GCA_000407305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/305/GCA_000407305.1_Ente_faec_V583_V2	-	V583
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.1175	52.4	-	MBBW01	171	2450	2149	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853003	GCA_001859425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/425/GCA_001859425.1_ASM185942v1	-	USO_DK12-38
Enterococcus faecium E4453	873127	PRJNA50723	50723	Terrabacteria group	Firmicutes	2.81931	37.8	-	AEDZ01	374	2857	2742	12/20/11	3/22/17	Contig	"University Medical Center Utrecht, Department of Medical Microbiology, The Netherlands, Utrecht"	SAMN02471513	GCA_000239095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/095/GCA_000239095.2_ASM23909v2	22363425	E4453
Clostridioides difficile BI1	699034	PRJNA42469	42469	Terrabacteria group	Firmicutes	4.4647	28.3513	chromosome:FN668941.1; plasmid pCDBI1:FN668942.1; plasmid unnamed:FN668943.1	-	3	-	-	3/24/10	2/27/15	Complete Genome	Wellcome Trust Sanger Institute	SAMEA3138395	GCA_000211235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/211/235/GCA_000211235.1_ASM21123v1	-	BI1
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.16004	59.9	-	FCFJ01	21	4948	4792	1/21/16	3/27/17	Scaffold	SC	SAMEA2274106	GCA_001540125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/125/GCA_001540125.1_12045_8_28	-	2880STDY5683037
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.86435	30.8	-	FBBI01	94	1958	1822	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683090	GCA_001489035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/035/GCA_001489035.1_H133040289	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.04956	55	-	FJYE01	44	5008	4747	4/5/16	3/28/17	Scaffold	SC	SAMEA2273334	GCA_900075525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/525/GCA_900075525.1_11983_6_14	-	e1336
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23886	64.1	-	FSDD01	31	5256	5101	12/14/16	3/21/17	Contig	SC	SAMEA2071458	GCA_900133365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/365/GCA_900133365.1_10250_1_42	-	382
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	4.91179	55.1	-	BEED01	286	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089457	GCA_002333525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/525/GCA_002333525.1_ASM233352v1	-	TUM10663
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.10112	67.3	-	MEBA01	128	6600	6091	11/18/16	6/28/17	Scaffold	Menzies School of Health Research	SAMN05712670	GCA_001882745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/745/GCA_001882745.1_ASM188274v1	-	MSMB0166
Pseudomonas sp. BS3767	1882756	PRJEB15918	348214	Proteobacteria	Gammaproteobacteria	6.13836	59.1	-	FNCX01	22	5546	5265	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444503	GCA_900099665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/099/665/GCA_900099665.1_IMG-taxon_2687453723_annotated_assembly	-	BS3767
Streptomyces sp. MUSC 1	1678012	PRJNA343838	343838	Terrabacteria group	Actinobacteria	10.2549	71.5	-	MLYO01	218	9310	8563	11/4/16	3/14/17	Contig	Monash University Malaysia	SAMN05915827	GCA_001866665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/665/GCA_001866665.1_ASM186666v1	-	MUSC 1
Streptomyces sp. MUSC 14	1354889	PRJNA343846	343846	Terrabacteria group	Actinobacteria	10.2748	71.3	-	MLYN01	174	9475	8698	11/4/16	3/14/17	Contig	Monash University Malaysia	SAMN05915731	GCA_001866675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/675/GCA_001866675.1_ASM186667v1	-	MUSC 14
Pseudomonas sp. UC 17F4	1855328	PRJEB15759	347669	Proteobacteria	Gammaproteobacteria	5.91476	62.8	-	FNKV01	2	5408	5246	10/20/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216487	GCA_900101695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/695/GCA_900101695.1_IMG-taxon_2667528182_annotated_assembly	-	UC 17F4
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.33765	66.8	-	MEBB01	570	7067	5887	11/18/16	6/28/17	Scaffold	Menzies School of Health Research	SAMN05712671	GCA_001882755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/755/GCA_001882755.1_ASM188275v1	-	MSMB0169
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.0373	55	-	BEEE01	236	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089458	GCA_002333545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/545/GCA_002333545.1_ASM233354v1	-	TUM10664
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.13287	64.2	-	FSDB01	23	5121	4978	12/14/16	3/21/17	Contig	SC	SAMEA2070778	GCA_900133375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/375/GCA_900133375.1_10250_1_40	-	380
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.72312	55.6	-	FJYF01	51	4646	4430	4/5/16	3/28/17	Scaffold	SC	SAMEA2273335	GCA_900075535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/535/GCA_900075535.1_11983_6_15	-	e1337
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.63556	31.6	-	FBLT01	49	1658	1585	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683369	GCA_001489055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/055/GCA_001489055.1_p568A	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.21616	59.8	-	FCJM01	19	5006	4850	1/21/16	3/27/17	Scaffold	SC	SAMEA2274004	GCA_001540145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/145/GCA_001540145.1_12082_3_33	-	2880STDY5682932
Borreliella bissettii DN127	521010	PRJNA29363	29363	Spirochaetes	Spirochaetia	1.40344	28.33	chromosome:NC_015921.1/CP002746.1; plasmid cp26:NC_015907.1/CP002747.1; plasmid cp32-11:NC_015903.1/CP002748.1; plasmid cp32-3:NC_015908.1/CP002749.1; plasmid cp32-4:NC_015904.1/CP002750.1; plasmid cp32-5:NC_015909.1/CP002751.1; plasmid cp32-6:NC_015905.1/CP002752.1; plasmid cp32-7:NC_015910.1/CP002753.1; plasmid cp32-quad:NC_015906.1/CP002754.1; plasmid cp9:NC_015911.1/CP002755.1; plasmid lp17:NC_015915.1/CP002756.1; plasmid lp25:NC_015922.1/CP002757.1; plasmid lp28-3:NC_015916.1/CP002758.1; plasmid lp28-4:NC_015917.1/CP002759.1; plasmid lp28-7:NC_015918.1/CP002760.1; plasmid lp54:NC_015919.1/CP002761.1; plasmid lp56:NC_015920.1/CP002762.1	-	17	1472	1326	8/1/11	9/4/17	Complete Genome	University of Maryland School of Medicine - Institute for Genome Sciences	SAMN02604204	GCA_000222305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/305/GCA_000222305.1_ASM22230v1	"2,220,774,926,813,420"	DN127
Enterococcus faecium E4452	933356	PRJNA60873	60873	Terrabacteria group	Firmicutes	2.76903	37.9	-	AEOU01	268	2777	2662	12/20/11	3/22/17	Contig	"Department of Medical Microbiology, University Medical Center Utrecht"	SAMN02471474	GCA_000239115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/115/GCA_000239115.2_ASM23911v2	22363425	E4452
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.11109	52.4	-	MBBX01	146	2450	2148	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853004	GCA_001859445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/445/GCA_001859445.1_ASM185944v1	-	USO_DK12-89
Enterococcus faecalis KI-6-1-110608-1	1260366	PRJNA179541	179541	Terrabacteria group	Firmicutes	2.63813	37.5	-	ATIE01	35	2599	2503	6/25/13	3/24/17	Scaffold	The Genome Institute	SAMN02436774	GCA_000414985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/985/GCA_000414985.1_ASM41498v1	-	KI-6-1-110608-1
Klebsiella pneumoniae CHS 39	1438745	PRJNA234208	234208	Proteobacteria	Gammaproteobacteria	5.89548	56.9	-	JMXN01	13	5967	5684	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581341	GCA_000693755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/755/GCA_000693755.1_Kleb_pneu_CHS_39_V1	-	CHS 39
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.0182	45.3	-	JNTC02	81	4802	4556	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741381	GCA_000707125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/125/GCA_000707125.2_ASM70712v2	"2,510,376,428,330,880"	CFSAN007445
Clostridioides difficile	1496	PRJNA329109	329109	Terrabacteria group	Firmicutes	4.01069	28.6	-	MTVX01	3	3714	3480	1/26/17	3/22/17	Contig	Broad Institute	SAMN05504805	GCA_001972115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/115/GCA_001972115.1_ASM197211v1	-	20110986
Vibrio cholerae PhVC-326	1399574	PRJNA218554	218554	Proteobacteria	Gammaproteobacteria	3.93219	47.5	-	AWWE01	71	3727	3593	6/12/15	3/26/17	Contig	CosmosID	SAMN02352647	GCA_001027485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/485/GCA_001027485.1_ASM102748v1	25900650	PhVC-326
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.14211	68.1	-	LWWL01	183	7430	6900	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208601	GCA_001976925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/925/GCA_001976925.1_ASM197692v1	-	NRF57-BP67
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.77304	50.7	-	CXNG01	405	5319	4592	7/16/15	2/24/17	Scaffold	SC	SAMEA2057984	GCA_001249395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/395/GCA_001249395.1_9870_6_6	-	143101
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.41367	38.3	-	FJFC01	25	3120	3015	2/20/16	3/27/17	Contig	SC	SAMEA2060125	GCA_900058815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/815/GCA_900058815.1_10060_4_83	-	2531STDY5467364
Streptococcus suis	1307	PRJNA279995	279995	Terrabacteria group	Firmicutes	2.05843	41.1	-	LDOM01	56	2090	1944	9/17/15	3/18/17	Contig	USDA-ARS	SAMN03485890	GCA_001293245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/245/GCA_001293245.1_Ssuis1606_v1.0	26543125	ISU1606
Streptococcus agalactiae MRI Z1-205	1154842	PRJNA86343	86343	Terrabacteria group	Firmicutes	2.12808	35.3	-	ANQH01	24	2198	2077	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN02436306	GCA_000323025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/025/GCA_000323025.1_ASM32302v1	-	MRI Z1-205
Acinetobacter baumannii ABNIH19	1094483	PRJNA73931	73931	Proteobacteria	Gammaproteobacteria	3.98233	39.2	-	APBH01	160	3905	3686	4/5/13	3/15/17	Contig	NISC	SAMN02470684	GCA_000353775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/775/GCA_000353775.1_ABNIH19_1	23564252	ABNIH19
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.91486	66	-	JTPB01	223	6745	6412	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105690	GCA_000792515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/515/GCA_000792515.1_AZPAE14993	25367914	AZPAE14993
Leptospira interrogans serovar Australis str. LT2148	1001594	PRJNA65057	65057	Spirochaetes	Spirochaetia	3.7663	35.7	-	AFMA01	1381	-	-	6/7/11	12/5/13	Contig	J. Craig Venter Institute	SAMN02436467	GCA_000216215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/215/GCA_000216215.2_CA_gls454142	-	LT2148
Streptococcus pyogenes	1314	PRJNA381156	381156	Terrabacteria group	Firmicutes	1.84263	38.3	-	NBYV01	20	1880	1769	4/28/17	6/8/17	Contig	UNIVERSIDADE FEDERAL DE CIENCIAS DA SAUDE DE PORTO ALEGRE	SAMN06671848	GCA_002115505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/505/GCA_002115505.1_ASM211550v1	-	WB136
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.03875	52.1	-	CMYP01	199	2285	2043	3/23/15	3/17/17	Contig	SC	SAMEA1031708	GCA_001087685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/685/GCA_001087685.1_6714_3_15	-	NM2263
Helicobacter pylori NQ4191	981221	PRJEA62455	62455	Proteobacteria	delta/epsilon subdivisions	1.62906	39.1	-	CADN01	43	1613	1464	3/9/11	3/23/17	Contig	MHH Hannover Medical School	SAMEA2272109	GCA_000285255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/255/GCA_000285255.1_ASM28525v1	21383187	NQ4191
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04995	39.6	-	CNRB02	157	2200	2005	3/22/15	3/11/17	Contig	SC	SAMEA1032557	GCA_001084425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/425/GCA_001084425.2_6999_1_23	-	R34-3206
Borrelia burgdorferi JD1	521008	PRJNA29359	29359	Spirochaetes	Spirochaetia	1.53109	28.3017	chromosome:NC_017403.1/CP002312.1; plasmid JD1 cp26:NC_017395.1/CP002316.1; plasmid JD1 cp32-1+5:NC_017394.1/CP002310.1; plasmid JD1 cp32-10:NC_017428.1/CP002323.1; plasmid JD1 cp32-11:NC_017393.1/CP002309.1; plasmid JD1 cp32-12:NC_017396.1/CP002321.1; plasmid JD1 cp32-3:NC_017427.1/CP002320.1; plasmid JD1 cp32-6:NC_017425.1/CP002307.1; plasmid JD1 cp32-8:NC_017426.1/CP002311.1; plasmid JD1 cp32-9:NC_017397.1/CP002322.1; plasmid JD1 lp17:NC_017410.1/CP002313.1; plasmid JD1 lp25:NC_017409.1/CP002308.1; plasmid JD1 lp28-1:NC_017404.1/CP002306.1; plasmid JD1 lp28-3:NC_017405.1/CP002314.1; plasmid JD1 lp28-4:NC_017407.1/CP002318.1; plasmid JD1 lp28-5:NC_017406.1/CP002317.1; plasmid JD1 lp28-6:NC_017408.1/CP002324.1; plasmid JD1 lp28-7:NC_017412.1/CP002319.1; plasmid JD1 lp36:NC_017411.1/CP002315.1; plasmid JD1 lp38:NC_017413.1/CP002325.1; plasmid JD1_lp54:NC_013129.1/CP001652.1	-	21	1604	1489	11/16/10	3/30/17	Complete Genome	University of Maryland School of Medicine - Institute for Genome Sciences	SAMN02604203	GCA_000166655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/655/GCA_000166655.2_ASM16665v1	20935092	JD1
Mycobacterium tuberculosis MD15963	1447500	PRJNA234619	234619	Terrabacteria group	Actinobacteria	4.39507	65.6	-	JLEG01	95	4340	4137	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584651	GCA_000650855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/855/GCA_000650855.1_Myco_tube_MD15963_V1	-	MD15963
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.52074	31.9	-	JVSY01	122	2502	2332	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197322	GCA_001070565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/565/GCA_001070565.1_ASM107056v1	26230489	1340_SEPI
Bacillus cereus	1396	PRJNA274235	274235	Terrabacteria group	Firmicutes	5.59323	35.1	-	LABI01	38	5899	5497	7/1/15	8/28/17	Scaffold	TU Muenchen	SAMN03325937	GCA_001044715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/715/GCA_001044715.1_ASM104471v1	26555390	INRA C3
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.10931	37.7	-	JOXZ01	30	3208	3104	7/15/14	2/26/17	Contig	Cornell University	SAMN02741508	GCA_000727085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/085/GCA_000727085.1_ASM72708v1	-	FSL R8-5884
Yersinia pestis EBD10-058	1348062	PRJNA208841	208841	Proteobacteria	Gammaproteobacteria	4.54268	47.4	-	ATWT01	581	4435	4102	6/12/14	3/24/17	Contig	Public Health Agency of Canada	SAMN02207408	GCA_000705315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/315/GCA_000705315.1_EDB10_058v1	24807359	EBD10-058
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64654	30.5	-	CUNR01	21	1728	1637	3/31/15	3/18/17	Contig	SC	SAMEA1010583	GCA_001226145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/145/GCA_001226145.1_7065_7_66	-	OXC6414
Clostridium chauvoei	46867	PRJNA356831	356831	Terrabacteria group	Firmicutes	2.87266	28.3	chromosome:CP018624.1	-	1	2700	2482	9/21/17	9/21/17	Complete Genome	Friedrich-Loeffler-Institut	SAMN06127796	GCA_002327185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/185/GCA_002327185.1_ASM232718v1	-	DSM 7528
Staphylococcus aureus M0539	1158685	PRJNA88669	88669	Terrabacteria group	Firmicutes	2.91223	32.9	-	AIXE01	16	3074	2908	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809055	GCA_000361485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/485/GCA_000361485.1_Stap_aure_M0539_V1	-	M0539
Staphylococcus aureus M0547	1158686	PRJNA88671	88671	Terrabacteria group	Firmicutes	2.91018	32.9	-	AIXF01	8	3061	2887	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809056	GCA_000361505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/505/GCA_000361505.1_Stap_aure_M0547_V1	-	M0547
Clostridium chauvoei JF4335	1351755	PRJEB3959	211323	Terrabacteria group	Firmicutes	2.88745	28.3	chromosome I:NZ_LT799839.1/LT799839.1	-	1	2687	2514	3/11/17	3/18/17	Complete Genome	SIB	SAMEA102059668	GCA_900168365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/365/GCA_900168365.1_JF4335	-	-
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.67604	30.4	-	CUVF01	12	1777	1645	3/31/15	3/18/17	Contig	SC	SAMEA1401127	GCA_001226225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/225/GCA_001226225.1_7213_3_75	-	OXC6620
Yersinia pestis subsp. pestis bv. Orientalis	1234661	PRJNA257008	257008	Proteobacteria	Gammaproteobacteria	4.82723	47.6952	plasmid pPCP1:NZ_CM003247.1/CM003247.1	LBFJ01	83	4698	4421	5/1/15	3/26/17	Contig	µFORGE	SAMN02999506	GCA_000986995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/986/995/GCA_000986995.1_YPES001-SEQ-2-ASM-1	-	ZE94-2122
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.1366	37.8	-	JOXU01	35	3250	3132	7/15/14	2/26/17	Contig	Cornell University	SAMN02741503	GCA_000727095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/095/GCA_000727095.1_ASM72709v1	-	FSL R8-5833
Bacillus cereus	1396	PRJNA274235	274235	Terrabacteria group	Firmicutes	5.55261	35.3	-	LABN01	68	5970	5550	7/1/15	8/28/17	Scaffold	TU Muenchen	SAMN03325942	GCA_001044735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/735/GCA_001044735.1_ASM104473v1	26555390	RIVM BC 90
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.42757	32	-	JVSC01	93	2379	2283	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197344	GCA_001070635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/635/GCA_001070635.1_ASM107063v1	26230489	154_SEPI
Mycobacterium tuberculosis MD15855	1447501	PRJNA234620	234620	Terrabacteria group	Actinobacteria	4.38462	65.6	-	JLEF01	85	4323	4099	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584652	GCA_000650875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/875/GCA_000650875.1_Myco_tube_MD15855_V1	-	MD15855
Mycoplasma synoviae ATCC 25204	1267001	PRJNA278855	278855	Terrabacteria group	Tenericutes	0.846495	28.3	chromosome:NZ_CP011096.1/CP011096.1	-	1	761	676	4/7/15	4/10/17	Complete Genome	University of Florida	SAMN03433916	GCA_000969765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/765/GCA_000969765.1_ASM96976v1	26021934	WVU1853
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.99463	39.7	-	CKDF01	111	2185	1965	3/21/15	3/11/17	Contig	SC	SAMEA1023942	GCA_001084445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/445/GCA_001084445.1_6593_5_19	-	28F
Helicobacter pylori N6	102616	PRJEA89447	89447	Proteobacteria	delta/epsilon subdivisions	1.65768	38.7	-	CAHX01	54	1658	1392	4/10/12	8/8/17	Contig	Hannover Medical School	SAMEA2272535	GCA_000285895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/895/GCA_000285895.1_ASM28589v1	-	N6
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.04054	52.1	-	CMZR01	197	2299	2055	3/23/15	3/17/17	Contig	SC	SAMEA1031693	GCA_001092265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/265/GCA_001092265.1_6714_4_19	-	NM2813
Streptococcus pyogenes	1314	PRJNA386535	386535	Terrabacteria group	Firmicutes	1.74576	38.4	-	NJPV01	43	1732	1612	8/14/17	8/16/17	Contig	Christian Medical College 	SAMN07270556	GCA_002250425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/425/GCA_002250425.1_ASM225042v1	-	ST36
Leptospira interrogans str. 2006001854	1001590	PRJNA65049	65049	Spirochaetes	Spirochaetia	4.94882	35.1	-	AFLW02	255	5698	5652	6/7/11	11/19/13	Contig	J. Craig Venter Institute	SAMN00255269	GCA_000216295.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/216/295/GCA_000216295.3_gls454037v02	-	2006001854
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.47679	66.1	-	JTPA01	156	6292	5968	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105691	GCA_000792545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/545/GCA_000792545.1_AZPAE14994	25367914	AZPAE14994
Acinetobacter baumannii ABNIH22	1094486	PRJNA73937	73937	Proteobacteria	Gammaproteobacteria	3.94101	39.2	-	APBJ01	233	3964	3699	4/5/13	3/15/17	Contig	NISC	SAMN02470698	GCA_000353795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/795/GCA_000353795.1_ABNIH22_1	23564252	ABNIH22
Streptococcus agalactiae STIR-CD-01	1154844	PRJNA86347	86347	Terrabacteria group	Firmicutes	2.08605	35.5	-	ANQE01	42	2122	2003	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN02436257	GCA_000323045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/045/GCA_000323045.1_ASM32304v1	-	STIR-CD-01
Streptococcus suis	1307	PRJNA279995	279995	Terrabacteria group	Firmicutes	2.10236	41.3	-	LDOH01	129	2274	1969	9/17/15	3/18/17	Contig	USDA-ARS	SAMN03485885	GCA_001293255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/255/GCA_001293255.1_Ssuis25-14_v1.0	26543125	ISU2514
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54148	38.3	-	FJIT01	60	3238	3087	2/20/16	3/27/17	Contig	SC	SAMEA2077795	GCA_900058825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/825/GCA_900058825.1_10625_3_31	-	2532STDY5467600
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.78606	50.7	-	CXNB01	402	5414	4614	7/16/15	2/24/17	Scaffold	SC	SAMEA2055834	GCA_001249415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/415/GCA_001249415.1_9870_6_40	-	143985
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.15041	68.2	-	LWWP01	119	7387	6808	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208605	GCA_001976965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/965/GCA_001976965.1_ASM197696v1	-	RF62-BP41
Vibrio cholerae PhVE-5	1399573	PRJNA218554	218554	Proteobacteria	Gammaproteobacteria	3.92932	47.5	-	AWWF01	76	3729	3591	6/12/15	3/26/17	Contig	CosmosID	SAMN02352648	GCA_001027495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/495/GCA_001027495.1_ASM102749v1	25900650	PhVE-5
Clostridioides difficile	1496	PRJNA329109	329109	Terrabacteria group	Firmicutes	4.23117	28.8	-	MTWF01	37	3940	3692	1/26/17	3/22/17	Contig	Broad Institute	SAMN05504803	GCA_001972135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/135/GCA_001972135.1_ASM197213v1	-	20120956
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.06685	45.3	-	JNSV02	30	4833	4643	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741374	GCA_000707145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/145/GCA_000707145.2_ASM70714v2	"2,510,376,428,330,880"	CFSAN007438
Klebsiella pneumoniae CHS 40	1438746	PRJNA234209	234209	Proteobacteria	Gammaproteobacteria	5.84694	56.9	-	JMXO01	10	5894	5624	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581342	GCA_000693775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/775/GCA_000693775.1_Kleb_pneu_CHS_40_V1	-	CHS 40
Enterococcus faecalis 02-MB-P-10	1260365	PRJNA179540	179540	Terrabacteria group	Firmicutes	2.90479	37.2	-	ATIF01	78	2895	2754	6/25/13	3/24/17	Scaffold	The Genome Institute	SAMN02436913	GCA_000415005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/005/GCA_000415005.1_ASM41500v1	-	02-MB-P-10
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.05357	52.6	-	MBBY01	124	2393	2073	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853005	GCA_001859465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/465/GCA_001859465.1_ASM185946v1	-	USO_GE12-070
Enterococcus faecium C309	1176489	PRJNA160211	160211	Terrabacteria group	Firmicutes	3.10243	37.6	-	AJTW01	199	3280	2949	12/24/12	4/10/17	Contig	"Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences"	SAMN02470931	GCA_000328425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/425/GCA_000328425.1_Hybrid_assembly	-	C309
Clostridium botulinum	1491	PRJDB3402	271187	Terrabacteria group	Firmicutes	3.9013	28.3	chromosome:NZ_AP014696.1/AP014696.1	-	1	3735	3544	1/6/15	3/25/17	Complete Genome	Osaka Prefecture University	SAMD00024166	GCA_000829015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/015/GCA_000829015.1_ASM82901v1	-	111
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.06921	60.1	-	FCLW01	20	4805	4647	1/21/16	3/27/17	Scaffold	SC	SAMEA2274069	GCA_001540165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/165/GCA_001540165.1_12082_3_91	-	2880STDY5682997
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65808	31.4	-	FBJH01	26	1724	1628	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683306	GCA_001489115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/115/GCA_001489115.1_CCN265	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.2804	54.3	-	FJYH01	81	5174	4902	4/5/16	3/28/17	Scaffold	SC	SAMEA2273337	GCA_900075545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/545/GCA_900075545.1_11983_6_17	-	e1340
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.20359	64.2	-	FSDC01	41	5201	5056	12/14/16	3/21/17	Contig	SC	SAMEA2071459	GCA_900133385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/385/GCA_900133385.1_10250_1_45	-	385
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	4.91911	55.1	-	BEEF01	238	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089459	GCA_002333565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/565/GCA_002333565.1_ASM233356v1	-	TUM10665
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.26545	67.4	-	MEBD01	200	6678	6121	11/18/16	6/28/17	Scaffold	Menzies School of Health Research	SAMN05712673	GCA_001882785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/785/GCA_001882785.1_ASM188278v1	-	MSMB0177
Pseudomonas sp. BS3759	1882755	PRJEB16212	348997	Proteobacteria	Gammaproteobacteria	6.47762	59.2	-	FNHT01	26	5852	5555	10/20/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444502	GCA_900103395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/395/GCA_900103395.1_IMG-taxon_2687453721_annotated_assembly	-	BS3759
Streptomyces sp. CB00316	1703932	PRJNA293172	293172	Terrabacteria group	Actinobacteria	7.41489	71.3	-	LIXI01	26	6708	6147	12/15/16	3/14/17	Contig	The Scripps Research Institute	SAMN03999381	GCA_001905595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/595/GCA_001905595.1_ASM190559v1	27999165	CB00316
Streptomyces sp. JHA26	1917143	PRJDB5272	375008	Terrabacteria group	Actinobacteria	7.34284	72.5	-	BDJC01	170	6676	6234	2/15/17	2/24/17	Contig	"Applied Microbiology, Faculty of Agriculture, Bioscience and Biotechnology, Kyushu University"	SAMD00066058	GCA_002005565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/565/GCA_002005565.1_ASM200556v1	-	JHA26
Pseudomonas sp. PDC86	1882759	PRJEB16560	349832	Proteobacteria	Gammaproteobacteria	6.96869	60.6	-	FNPO01	86	6393	6201	10/22/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05444743	GCA_900107325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/325/GCA_900107325.1_IMG-taxon_2687453791_annotated_assembly	-	PDC86
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	6.45826	67.3	-	MEBH01	70	5993	5620	11/18/16	6/28/17	Scaffold	Menzies School of Health Research	SAMN05712677	GCA_001882795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/795/GCA_001882795.1_ASM188279v1	-	MSMB0312a
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	4.99632	55	-	BEEG01	196	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089460	GCA_002333585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/585/GCA_002333585.1_ASM233358v1	-	TUM10666
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.01526	64.2	-	FSDF01	19	4996	4848	12/14/16	3/21/17	Contig	SC	SAMEA2070781	GCA_900133395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/395/GCA_900133395.1_10250_1_49	-	389
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.16775	55.6	-	FJYG01	52	5167	4933	4/5/16	3/28/17	Scaffold	SC	SAMEA2273336	GCA_900075555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/555/GCA_900075555.1_11983_6_16	-	e1339
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.77637	31.2	-	FBES01	42	1868	1763	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683184	GCA_001489135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/135/GCA_001489135.1_SS_2285	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.14448	60	-	FCGT01	21	4899	4743	1/21/16	3/27/17	Scaffold	SC	SAMEA2273905	GCA_001540185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/185/GCA_001540185.1_12082_2_41	-	2880STDY5682832
Spiroplasma apis B31	1276258	PRJNA184751	184751	Terrabacteria group	Tenericutes	1.16055	28.3	chromosome:NC_022998.1/CP006682.1	-	1	1030	990	12/3/13	4/17/17	Complete Genome	Academia Sinica	SAMN02641479	GCA_000500935.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/935/GCA_000500935.1_ASM50093v1	24407648	B31
Enterococcus faecium ATCC 8459	1158600	PRJNA191899	191899	Terrabacteria group	Firmicutes	2.82006	37.9	-	ASVW01	10	2879	2677	5/31/13	3/24/17	Contig	Broad Institute	SAMN02596948	GCA_000407385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/385/GCA_000407385.1_Ente_faec_ATCC8459_V2	-	ATCC 8459
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.06995	52.6	-	MBBZ01	140	2428	2097	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853006	GCA_001859485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/485/GCA_001859485.1_ASM185948v1	-	USO_IE12-018
Enterococcus faecalis 20-SD-BW-06	1260364	PRJNA179539	179539	Terrabacteria group	Firmicutes	2.79151	37.5	-	ATIG01	40	2783	2687	6/25/13	3/24/17	Scaffold	The Genome Institute	SAMN02436905	GCA_000415025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/025/GCA_000415025.1_ASM41502v1	-	20-SD-BW-06
Klebsiella pneumoniae CHS 41	1438747	PRJNA234210	234210	Proteobacteria	Gammaproteobacteria	5.88846	56.9	-	JMXP01	10	5964	5689	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581343	GCA_000693795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/795/GCA_000693795.1_Kleb_pneu_CHS_41_V1	-	CHS 41
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.13919	45.2	-	JNSU02	103	4936	4724	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741373	GCA_000707165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/165/GCA_000707165.2_ASM70716v2	"2,510,376,428,330,880"	CFSAN007437
Clostridioides difficile	1496	PRJNA329109	329109	Terrabacteria group	Firmicutes	4.29171	28.7	-	MTWG01	6	4036	3820	1/26/17	3/22/17	Contig	Broad Institute	SAMN05504817	GCA_001972165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/165/GCA_001972165.1_ASM197216v1	-	20121013
Vibrio cholerae PhVC-311	1399575	PRJNA218554	218554	Proteobacteria	Gammaproteobacteria	3.92797	47.5	-	AWWD01	70	3714	3578	6/12/15	3/26/17	Contig	CosmosID	SAMN02352646	GCA_001027505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/505/GCA_001027505.1_ASM102750v1	25900650	PhVC-311
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.08016	68.2	-	LWWN01	147	7361	6811	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208603	GCA_001976975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/975/GCA_001976975.1_ASM197697v1	-	NRF60-BP4
Shigella sonnei	624	PRJEB2460	204320	Proteobacteria	Gammaproteobacteria	4.68973	50.7	-	CXGL01	436	5225	4472	7/16/15	2/24/17	Scaffold	SC	SAMEA1027709	GCA_001249435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/435/GCA_001249435.1_7353_1_19	-	H112440349
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54045	38.3	-	FJIZ01	63	3227	3086	2/20/16	3/27/17	Contig	SC	SAMEA2077747	GCA_900058835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/835/GCA_900058835.1_10625_2_75	-	2532STDY5467548
Streptococcus suis	1307	PRJNA279995	279995	Terrabacteria group	Firmicutes	2.0562	41.2	-	LDOJ01	88	2117	1908	9/17/15	3/18/17	Contig	USDA-ARS	SAMN03485887	GCA_001293295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/295/GCA_001293295.1_Ssuis27-14_v1.0	26543125	ISU2714
Streptococcus agalactiae LMG 14747	1154860	PRJNA86379	86379	Terrabacteria group	Firmicutes	2.21834	39.7	-	ANQC01	150	2334	2016	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN01822993	GCA_000323065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/065/GCA_000323065.2_ASM32306v2	-	LMG 14747
Acinetobacter baumannii ABNIH23	1094487	PRJNA73939	73939	Proteobacteria	Gammaproteobacteria	3.92585	39.2	-	APBK01	255	3939	3672	4/5/13	3/15/17	Contig	NISC	SAMN02470691	GCA_000353815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/815/GCA_000353815.1_ABNIH23_1	23564252	ABNIH23
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.38945	66.3	-	JTOZ01	117	6131	5929	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105692	GCA_000792565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/565/GCA_000792565.1_AZPAE14995	25367914	AZPAE14995
Leptospira interrogans str. 2002000626	996803	PRJNA63711	63711	Spirochaetes	Spirochaetia	4.84676	35.3	-	AFJL02	269	5156	5113	6/7/11	11/19/13	Contig	J. Craig Venter Institute	SAMN00255256	GCA_000217495.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/495/GCA_000217495.3_gls454029v02	-	2002000626
Streptococcus pyogenes	1314	PRJNA386535	386535	Terrabacteria group	Firmicutes	1.76601	38.7	-	NGQN01	86	1754	1589	8/24/17	8/24/17	Contig	Christian Medical College 	SAMN06972303	GCA_002268475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/475/GCA_002268475.1_ASM226847v1	-	MUMCMC317
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.06551	52	-	CMZQ01	182	2327	2060	3/22/15	3/21/17	Contig	SC	SAMEA1031682	GCA_001093625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/625/GCA_001093625.1_6714_4_22	-	NM2857
Helicobacter pylori FD430	1191280	PRJNA165757	165757	Proteobacteria	delta/epsilon subdivisions	1.64036	39.1	-	AKHN02	129	1688	1459	7/24/12	3/24/17	Contig	University of Malaya-Malaysian Genomics Resource Centre Berhad-University of New South Wales	SAMN00996393	GCA_000295975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/975/GCA_000295975.2_FD430	"2,301,227,824,051,310"	FD430
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.03862	39.7	-	CKIA01	47	2254	2037	3/21/15	3/11/17	Contig	SC	SAMEA1023852	GCA_001084465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/465/GCA_001084465.1_6631_3_14	-	32A
Borrelia afzelii HLJ01	1239934	PRJNA176667	176667	Spirochaetes	Spirochaetia	0.905471	28.3	chromosome:NC_018887.1/CP003882.1	-	1	854	727	10/10/12	3/30/17	Complete Genome	Beijing Institute of Microbiology and Epidemiology	SAMN02603021	GCA_000304735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/735/GCA_000304735.1_ASM30473v1	23209254	HLJ01
Mycobacterium tuberculosis MD16257	1447502	PRJNA234622	234622	Terrabacteria group	Actinobacteria	4.38569	65.6	-	JLEE01	86	4324	4102	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584653	GCA_000650895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/895/GCA_000650895.1_Myco_tube_MD16257_V1	-	MD16257
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.61124	31.8	-	JVSH01	193	2602	2455	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197339	GCA_001070645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/645/GCA_001070645.1_ASM107064v1	26230489	15_SEPI
Bacillus cereus	1396	PRJNA274235	274235	Terrabacteria group	Firmicutes	5.41472	35.4	-	LABO01	47	5764	5332	7/1/15	8/28/17	Scaffold	TU Muenchen	SAMN03325943	GCA_001044745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/745/GCA_001044745.1_ASM104474v1	26555390	RIMV BC 126
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09904	37.7	-	JOXW01	22	3197	3099	7/15/14	2/26/17	Contig	Cornell University	SAMN02741505	GCA_000727125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/125/GCA_000727125.1_ASM72712v1	-	FSL R8-5854
Yersinia pestis	632	PRJNA257008	257008	Proteobacteria	Gammaproteobacteria	4.49946	47.5599	plasmid pMT1:NZ_CP015119.1/CP015119.1	LBFK01	113	4135	3858	5/1/15	5/12/16	Contig	µFORGE	SAMN03418619	GCA_000987005.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/987/005/GCA_000987005.3_YPES002-SEQ-1-ASM-1	-	125 B plague Bombay
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70094	30.3	-	CUIV01	20	1805	1711	3/31/15	3/18/17	Contig	SC	SAMEA1010293	GCA_001226245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/245/GCA_001226245.1_7038_3_39	-	OXC6289
Candidatus Arthromitus sp. SFB-mouse-Japan	1029718	PRJDA66727	66727	Terrabacteria group	Firmicutes	1.62	28.3	chromosome:NC_015913.1/AP012202.1	-	1	1571	1481	8/3/11	4/7/17	Complete Genome	"Frontier Science Research Center, University of Miyazaki"	SAMD00060989	GCA_000270205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/205/GCA_000270205.1_ASM27020v1	21791478	-
Staphylococcus aureus M0562	1158535	PRJNA88979	88979	Terrabacteria group	Firmicutes	2.88405	32.9	-	AJDB01	6	2926	2814	4/9/13	8/1/15	Scaffold	Broad Institute	SAMN00809189	GCA_000361525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/525/GCA_000361525.1_Stap_aure_M0562_V1	-	M0562
Staphylococcus aureus M0565	1158687	PRJNA88673	88673	Terrabacteria group	Firmicutes	2.88781	32.9	-	AIXG01	7	3018	2850	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809057	GCA_000361545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/545/GCA_000361545.1_Stap_aure_M0565_V1	-	M0565
Clostridium chauvoei	46867	PRJNA356831	356831	Terrabacteria group	Firmicutes	2.88957	28.2982	chromosome:CP018630.1; plasmid unnamed:CP018631.1	-	2	2699	2521	9/21/17	9/21/17	Complete Genome	Friedrich-Loeffler-Institut	SAMN06127795	GCA_002327205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/205/GCA_002327205.1_ASM232720v1	-	12S0467
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64026	30.5	-	CUVA01	15	1724	1626	3/31/15	3/18/17	Contig	SC	SAMEA1401365	GCA_001226345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/345/GCA_001226345.1_7213_3_70	-	OXC6614
Yersinia pestis 1670	1345700	PRJNA208247	208247	Proteobacteria	Gammaproteobacteria	4.71882	47.6868	plasmid pCD:NZ_CM003367.1/CM003367.1; plasmid pMT:NZ_CM003368.1/CM003368.1	AYLR01	7	4519	4241	7/29/15	3/26/17	Contig	Los Alamos National Laboratory	SAMN03943538	GCA_001188335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/335/GCA_001188335.1_DYA_1	26383663	1670
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09816	37.7	-	JOYA01	23	3205	3101	7/15/14	2/26/17	Contig	Cornell University	SAMN02741509	GCA_000727145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/145/GCA_000727145.1_ASM72714v1	-	FSL R8-5975
Bacillus cereus	1396	PRJNA274235	274235	Terrabacteria group	Firmicutes	5.58283	35.5	-	LABJ01	28	5994	5613	7/1/15	9/18/17	Scaffold	TU Muenchen	SAMN03325938	GCA_001044775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/775/GCA_001044775.1_ASM104477v1	26555390	IP5832
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.54517	31.9	-	JVRX01	65	2528	2413	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197349	GCA_001070675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/675/GCA_001070675.1_ASM107067v1	26230489	158_SEPI
Mycobacterium tuberculosis MD14620	1447504	PRJNA234625	234625	Terrabacteria group	Actinobacteria	4.37943	65.6	-	JLEC01	90	4328	4113	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584655	GCA_000650915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/915/GCA_000650915.1_Myco_tube_MD14620_V1	-	MD14620
Clostridium botulinum F str. 230613	758678	PRJNA47575	47575	Terrabacteria group	Firmicutes	4.01061	28.2904	chromosome:NC_017297.1/CP002011.1; plasmid pCBF:NC_017298.1/CP002012.1	-	2	3848	3358	4/28/10	3/22/17	Complete Genome	Beijing Institute of Microbiology and Epidemiology	SAMN02603020	GCA_000092345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/345/GCA_000092345.1_ASM9234v1	-	230613
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11647	39.5	-	CLEA01	65	2333	2099	3/21/15	3/11/17	Contig	SC	SAMEA1026114	GCA_001084485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/485/GCA_001084485.1_6899_5_23	-	SMRU2063
Helicobacter pylori FD506	1191281	PRJNA165757	165757	Proteobacteria	delta/epsilon subdivisions	1.61524	38.7	-	AKHO02	105	1633	1415	7/24/12	3/24/17	Contig	University of Malaya-Malaysian Genomics Resource Centre Berhad-University of New South Wales	SAMN00996394	GCA_000295995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/995/GCA_000295995.2_FD506	"2,301,227,824,051,310"	FD506
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.06986	52.1	-	CMYI01	175	2332	2069	3/23/15	3/17/17	Contig	SC	SAMEA1031674	GCA_001098105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/105/GCA_001098105.1_6714_2_3	-	NM1826
Streptococcus pyogenes	1314	PRJNA386535	386535	Terrabacteria group	Firmicutes	1.72586	38.5	-	NGQI01	41	1733	1569	8/24/17	8/27/17	Contig	Christian Medical College 	SAMN06972308	GCA_002268485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/485/GCA_002268485.1_ASM226848v1	-	MUMCMC2276
Leptospira interrogans serovar Pyrogenes str. L0374	1049928	PRJNA74081	74081	Spirochaetes	Spirochaetia	4.84614	35.2	-	AHMZ02	163	5310	5266	1/24/12	11/19/13	Contig	J. Craig Venter Institute	SAMN00739244	GCA_000243935.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/935/GCA_000243935.3_gls454083v02	-	L0374
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.45981	66.4	-	JTOY01	72	6105	5924	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105693	GCA_000792575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/575/GCA_000792575.1_AZPAE14996	25367914	AZPAE14996
Acinetobacter baumannii ABNIH13	1094477	PRJNA73919	73919	Proteobacteria	Gammaproteobacteria	3.95949	39.3	-	APBB01	245	3964	3667	4/5/13	3/15/17	Contig	NISC	SAMN02470685	GCA_000353855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/855/GCA_000353855.1_ABNIH13_1	23564252	ABNIH13
Streptococcus agalactiae CCUG 34230	1154862	PRJNA86383	86383	Terrabacteria group	Firmicutes	2.16869	35.5	-	ANQB01	16	2203	2106	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN02436210	GCA_000323085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/085/GCA_000323085.1_ASM32308v1	-	CCUG 34230
Streptococcus suis	1307	PRJNA279995	279995	Terrabacteria group	Firmicutes	2.25935	41.5	-	LDOK01	218	2361	1921	9/17/15	3/18/17	Contig	USDA-ARS	SAMN03485888	GCA_001293305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/305/GCA_001293305.1_Ssuis28-12_v1.0	26543125	ISU2812
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.45047	38.3	-	FJLW01	39	3159	3021	2/20/16	3/27/17	Contig	SC	SAMEA2080795	GCA_900058845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/845/GCA_900058845.1_10625_3_68	-	2532STDY5467637
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.93669	50.5	-	CWXG01	473	5776	4721	7/16/15	2/24/17	Scaffold	SC	SAMEA2434385	GCA_001249455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/455/GCA_001249455.1_12844_1_58	-	21201783
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.02747	68.2	-	LWWZ01	345	7371	6717	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208615	GCA_001977005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/005/GCA_001977005.1_ASM197700v1	-	INT2-BP24
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.05803	47.5	-	LGNH01	83	3879	3718	7/24/15	3/26/17	Contig	University of maryland	SAMN03839342	GCA_001186485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/485/GCA_001186485.1_ASM118648v1	-	EM-1626
Clostridioides difficile	1496	PRJNA329109	329109	Terrabacteria group	Firmicutes	4.46913	28.5	-	MTWH01	10	4199	3969	1/26/17	3/22/17	Contig	Broad Institute	SAMN05504815	GCA_001972185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/185/GCA_001972185.1_ASM197218v1	-	20121190
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.20557	45.1	-	JNUN02	45	5018	4781	6/13/14	3/20/17	Contig	FDA/CFSAN	SAMN02741395	GCA_000707185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/185/GCA_000707185.2_ASM70718v2	26994080	CFSAN007459
Klebsiella pneumoniae CHS 43	1438749	PRJNA234212	234212	Proteobacteria	Gammaproteobacteria	5.7208	57	-	JMXQ01	17	5704	5422	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581345	GCA_000693815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/815/GCA_000693815.1_Kleb_pneu_CHS_43_V1	-	CHS 43
Enterococcus faecalis 02-MB-BW-10	1260363	PRJNA179538	179538	Terrabacteria group	Firmicutes	3.05362	37.1	-	ATIH01	157	3154	2974	6/25/13	3/24/17	Scaffold	The Genome Institute	SAMN02436906	GCA_000415045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/045/GCA_000415045.1_ASM41504v1	-	02-MB-BW-10
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.05611	52.6	-	MBCA01	172	2365	2069	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853007	GCA_001859495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/495/GCA_001859495.1_ASM185949v1	-	USO_IE12-048
Enterococcus faecium EnGen0375	1138937	PRJNA191893	191893	Terrabacteria group	Firmicutes	3.12032	37.7	-	ASWQ01	17	3226	3008	5/31/13	3/24/17	Contig	Broad Institute	SAMN02596966	GCA_000407625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/625/GCA_000407625.1_Ente_faec_Efm_NY2-1_V2	-	EnGen0375
Clostridium botulinum F str. Langeland	441772	PRJNA19519	19519	Terrabacteria group	Firmicutes	4.01292	28.2904	chromosome:NC_009699.1/CP000728.1; plasmid pCLI:NC_009700.1/CP000729.1	-	2	3846	3650	7/20/07	3/22/17	Complete Genome	Los Alamos National Laboratory	SAMN02603533	GCA_000017065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/065/GCA_000017065.1_ASM1706v1	-	Langeland
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.1306	59.9	-	FCGV01	27	4856	4711	1/21/16	3/27/17	Scaffold	SC	SAMEA2273915	GCA_001540205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/205/GCA_001540205.1_12082_2_50	-	2880STDY5682842
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.6397	31.4	-	FBAM01	17	1694	1601	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683081	GCA_001489155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/155/GCA_001489155.1_p515A	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.74442	55.9	-	FJYI01	48	4559	4367	4/5/16	3/28/17	Scaffold	SC	SAMEA2273338	GCA_900075565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/565/GCA_900075565.1_12082_4_47	-	e1342
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.19471	64.2	-	FSDE01	25	5249	5088	12/14/16	3/21/17	Contig	SC	SAMEA2071460	GCA_900133405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/405/GCA_900133405.1_10250_1_48	-	388
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.10532	55.1	-	BEEH01	348	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089461	GCA_002333605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/605/GCA_002333605.1_ASM233360v1	-	TUM10667
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.20216	67.4	-	MEBJ01	42	6514	6142	11/18/16	6/28/17	Scaffold	Menzies School of Health Research	SAMN05712679	GCA_001882825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/825/GCA_001882825.1_ASM188282v1	-	MSMB0671b
Pseudomonas sp. NFPP28	1566231	PRJEB17284	351464	Proteobacteria	Gammaproteobacteria	6.35361	61	-	FOWT01	23	5831	5664	10/31/16	8/3/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN03159315	GCA_900115535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/535/GCA_900115535.1_IMG-taxon_2599185167_annotated_assembly	-	NFPP28
Streptomyces sp. GKU 895	1662404	PRJNA374788	374788	Terrabacteria group	Actinobacteria	8.29641	70.7	-	MWJO01	190	7691	6015	3/14/17	3/16/17	Contig	"Actinobacterial Research Unit, Department of Genetics, Faculty of Science, Kasetsart University"	SAMN06335520	GCA_002027195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/195/GCA_002027195.1_ASM202719v1	-	GKU 895
Streptomyces sp. M41(2017)	1955065	PRJNA371748	371748	Terrabacteria group	Actinobacteria	9.02371	71.4	-	MWFK01	5	8063	7753	4/3/17	4/5/17	Contig	Harvard Medical School	SAMN06311458	GCA_002078175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/175/GCA_002078175.1_ASM207817v1	28326787	M41
Pseudomonas sp. OV546	1881063	PRJEB17585	351954	Proteobacteria	Gammaproteobacteria	6.7797	60.5	-	FPCE01	34	6242	6038	11/2/16	8/3/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428951	GCA_900116845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/845/GCA_900116845.1_IMG-taxon_2684623003_annotated_assembly	-	OV546
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.26216	67.3	-	MEBK01	44	6630	6251	11/18/16	6/28/17	Scaffold	Menzies School of Health Research	SAMN05712680	GCA_001882845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/845/GCA_001882845.1_ASM188284v1	-	MSMB0673
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	4.77512	55.6	-	BEEI01	146	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089462	GCA_002333625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/625/GCA_002333625.1_ASM233362v1	-	TUM10668
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.19146	64.2	-	FSDI01	37	5243	5082	12/14/16	3/21/17	Contig	SC	SAMEA2068965	GCA_900133425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/425/GCA_900133425.1_10396_8_3	-	387
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.61449	55.8	-	FJYJ01	21	4443	4260	4/5/16	3/28/17	Scaffold	SC	SAMEA2273339	GCA_900075575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/575/GCA_900075575.1_11983_6_18	-	e1343
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66017	31.3	-	FBAD01	25	1721	1632	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683076	GCA_001489175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/175/GCA_001489175.1_EC3782	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.05368	60.1	-	FCGJ01	17	4781	4617	1/21/16	3/27/17	Scaffold	SC	SAMEA2274100	GCA_001540225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/225/GCA_001540225.1_12045_8_22	-	2880STDY5683031
Clostridium baratii	1561	PRJNA301987	301987	Terrabacteria group	Firmicutes	3.21172	28.2835	chromosome:NZ_CP014204.1/CP014204.1; plasmid pNPD11_1:NZ_CP014203.1/CP014203.1	-	2	3069	2933	2/10/17	4/6/17	Complete Genome	Los Alamos National Laboratory	SAMN04262349	GCA_001991075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/991/075/GCA_001991075.1_ASM199107v1	-	CDC51267
Enterococcus faecium UC7267	1328869	PRJNA200656	200656	Terrabacteria group	Firmicutes	2.69767	37.9	-	ASAM01	458	2749	2503	6/14/13	3/24/17	Contig	Universita Cattolica del Sacro Cuore	SAMN02471391	GCA_000411635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/635/GCA_000411635.1_ASM41163v1	-	UC7267
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.08461	52.5	-	MBCB01	158	2427	2115	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853008	GCA_001859525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/525/GCA_001859525.1_ASM185952v1	-	USO_IE12-050
Enterococcus faecalis D811610-10	1260362	PRJNA179537	179537	Terrabacteria group	Firmicutes	2.72052	37.6	-	ATII01	32	2696	2596	6/25/13	3/24/17	Scaffold	The Genome Institute	SAMN02436841	GCA_000415065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/065/GCA_000415065.1_ASM41506v1	-	D811610-10
Klebsiella pneumoniae CHS 44	1438750	PRJNA234213	234213	Proteobacteria	Gammaproteobacteria	5.85746	56.9	-	JMXR01	16	5965	5683	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581346	GCA_000693835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/835/GCA_000693835.1_Kleb_pneu_CHS_44_V1	-	CHS 44
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.09166	45.3	-	JNTT02	55	4907	4688	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741397	GCA_000707205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/205/GCA_000707205.2_ASM70720v2	"2,510,376,428,330,880"	CFSAN007461
Clostridioides difficile	1496	PRJNA329109	329109	Terrabacteria group	Firmicutes	4.27899	28.9	-	MTWI01	4	3963	3760	1/26/17	3/22/17	Contig	Broad Institute	SAMN05504808	GCA_001972195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/195/GCA_001972195.1_ASM197219v1	-	20121412
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.03291	47.5	-	LGNW01	128	3809	3670	7/24/15	3/26/17	Contig	University of maryland	SAMN03839357	GCA_001186495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/495/GCA_001186495.1_ASM118649v1	-	NHCC-078
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.14902	68.1	-	LWXA01	245	7447	6841	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208616	GCA_001977015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/015/GCA_001977015.1_ASM197701v1	-	INT2-BP38
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.62711	50.7	-	CXFE01	376	5033	4432	7/16/15	2/24/17	Scaffold	SC	SAMEA954580	GCA_001249475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/475/GCA_001249475.1_6246_5_5	-	SS134791_2496122
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.48563	38.3	-	FJMA01	31	3185	3055	2/20/16	3/27/17	Contig	SC	SAMEA2078030	GCA_900058855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/855/GCA_900058855.1_10625_3_73	-	2532STDY5467642
Streptococcus suis	1307	PRJNA279995	279995	Terrabacteria group	Firmicutes	2.10208	41.2	-	LDON01	85	2202	1969	9/17/15	3/18/17	Contig	USDA-ARS	SAMN03485891	GCA_001293355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/355/GCA_001293355.1_Ssuis2660_v1.0	26543125	ISU2660
Streptococcus agalactiae FSL S3-222	1154780	PRJNA86151	86151	Terrabacteria group	Firmicutes	2.20712	35.4	-	ANPW01	101	2267	2131	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN01888211	GCA_000323105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/105/GCA_000323105.1_ASM32310v1	-	FSL S3-222
Acinetobacter baumannii ABNIH26	1224166	PRJNA172977	172977	Proteobacteria	Gammaproteobacteria	3.93729	39.1	-	AOGD01	130	3857	3696	4/5/13	3/15/17	Contig	NISC	SAMN02470690	GCA_000353895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/895/GCA_000353895.1_ABNIH26_1	23564252	ABNIH26
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.71521	66	-	JTOX01	75	6502	6305	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105694	GCA_000792605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/605/GCA_000792605.1_AZPAE14997	25367914	AZPAE14997
Leptospira interrogans str. L1207	1049933	PRJNA74091	74091	Spirochaetes	Spirochaetia	4.39667	35	-	AHNE02	36	4692	4650	1/24/12	12/5/13	Contig	J. Craig Venter Institute	SAMN02436374	GCA_000244035.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/035/GCA_000244035.3_gls454088v2.0	-	L1207
Streptococcus pyogenes	1314	PRJNA386535	386535	Terrabacteria group	Firmicutes	1.85437	38.2	-	NGQM01	57	1901	1602	8/24/17	8/24/17	Contig	Christian Medical College 	SAMN06972304	GCA_002268515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/515/GCA_002268515.1_ASM226851v1	-	MUMCMC616
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.0446	52.1	-	CMZS01	201	2286	2042	3/23/15	3/17/17	Contig	SC	SAMEA1031632	GCA_001100505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/505/GCA_001100505.1_6714_4_2	-	NM2432
Helicobacter pylori FD535	1191464	PRJNA165757	165757	Proteobacteria	delta/epsilon subdivisions	1.67156	39.1	-	AKHP02	81	1692	1480	7/24/12	3/24/17	Contig	University of Malaya-Malaysian Genomics Resource Centre Berhad-University of New South Wales	SAMN00996486	GCA_000296015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/015/GCA_000296015.2_FD535	"2,301,227,824,051,310"	FD535
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.16113	39.7	-	CNSS02	273	2372	2136	3/23/15	3/11/17	Contig	SC	SAMEA1032694	GCA_001084505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/505/GCA_001084505.2_6999_3_9	-	27999
Clostridium baratii str. Sullivan	1415775	PRJNA225788	225788	Terrabacteria group	Firmicutes	3.33863	28.2611	chromosome:NZ_CP006905.1/CP006905.1; plasmid pCBJ:NZ_CP006906.1/CP006906.1	-	2	3210	3082	12/4/14	4/2/17	Complete Genome	Los Alamos National Laboratory	SAMN03222823	GCA_000789395.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/395/GCA_000789395.1_ASM78939v1	25489752	Sullivan
Mycobacterium tuberculosis MD14844	1447507	PRJNA234629	234629	Terrabacteria group	Actinobacteria	4.43146	65.6	-	JLDZ01	98	4363	4149	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584658	GCA_000650935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/935/GCA_000650935.1_Myco_tube_MD14844_V1	-	MD14844
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.61225	31.9	-	JVRV01	107	2569	2461	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197351	GCA_001070695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/695/GCA_001070695.1_ASM107069v1	26230489	16_SEPI
Bacillus cereus	1396	PRJNA274235	274235	Terrabacteria group	Firmicutes	5.53049	35.4	-	LABK01	54	5897	5583	7/1/15	9/18/17	Scaffold	TU Muenchen	SAMN03325939	GCA_001044795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/795/GCA_001044795.1_ASM104479v1	26555390	MHI 86
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.10536	37.8	-	JOXV01	30	3201	3090	7/15/14	2/26/17	Contig	Cornell University	SAMN02741504	GCA_000727165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/165/GCA_000727165.1_ASM72716v1	-	FSL R8-5844
Yersinia pestis	632	PRJEB11860	304135	Proteobacteria	Gammaproteobacteria	4.6374	47.6	-	FAUR01	87	4395	4187	11/29/15	3/27/17	Contig	URMITE	SAMEA3673143	GCA_001487065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/065/GCA_001487065.1_Yersinia_pestis	-	Algeria 3
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70481	30.3	-	CUJP01	25	1810	1701	3/31/15	3/18/17	Contig	SC	SAMEA1010485	GCA_001226385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/385/GCA_001226385.1_7038_3_57	-	OXC6307
Buchnera aphidicola	9	PRJEB15400	354852	Proteobacteria	Gammaproteobacteria	0.456703	28.258	chromosome 1:NZ_LT667500.1/LT667500.1; plasmid pLeu:NZ_LT667501.1/LT667501.1; plasmid pTrp:NZ_LT667502.1/LT667502.1	-	3	419	376	11/26/16	4/10/17	Complete Genome	Centre de Biologie pour la Gestion des Populations (CBGP - UMR1062)	SAMEA4556317	GCA_900128725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/725/GCA_900128725.1_BCifornacula_v1.0	-	BCifornacula
Staphylococcus aureus M0571	1158536	PRJNA88981	88981	Terrabacteria group	Firmicutes	2.90869	33	-	AJDC01	3	3058	2896	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809190	GCA_000361565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/565/GCA_000361565.1_Stap_aure_M0571_V1	-	M0571
Staphylococcus aureus M0580	1158688	PRJNA88675	88675	Terrabacteria group	Firmicutes	2.86369	32.9	-	AIXH01	3	2991	2830	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809058	GCA_000361585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/585/GCA_000361585.1_Stap_aure_M0580_V1	-	M0580
Clostridium botulinum BKT015925	929506	PRJNA60407	60407	Terrabacteria group	Firmicutes	3.20759	28.2433	chromosome:NC_015425.1/CP002410.1; plasmid p1BKT015925:NC_015417.1/CP002411.1; plasmid p2BKT015925:NC_015426.1/CP002412.1; plasmid p3BKT015925:NC_015418.1/CP002413.1; plasmid p4BKT015925:NC_015427.1/CP002414.1; plasmid p5BKT015925:NC_015419.1/CP002415.1	-	6	3046	2870	4/18/11	3/22/17	Complete Genome	"National Veterinary Institute (SVA), Sweden"	SAMN02603671	GCA_000204565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/204/565/GCA_000204565.1_ASM20456v1	21486474	BKT015925
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66357	30.4	-	CUNU01	11	1765	1659	3/31/15	4/21/17	Contig	SC	SAMEA1010621	GCA_001226425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/425/GCA_001226425.1_7065_7_69	-	OXC6417
Yersinia pestis	632	PRJNA306824	306824	Proteobacteria	Gammaproteobacteria	4.57572	47.5	-	LPXU01	246	4319	4034	4/7/16	3/28/17	Contig	"Russian Research Anti-Plague institute ""Microbe"""	SAMN04364500	GCA_001613895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/895/GCA_001613895.1_ASM161389v1	-	KM-816
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.13766	37.8	-	JOYL01	40	3253	3135	7/15/14	2/26/17	Contig	Cornell University	SAMN02741520	GCA_000727175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/175/GCA_000727175.1_ASM72717v1	-	FSL R8-6160
Bacillus cereus	1396	PRJNA274235	274235	Terrabacteria group	Firmicutes	6.09085	35.2	-	LABM01	92	6547	6100	7/1/15	8/28/17	Scaffold	TU Muenchen	SAMN03325941	GCA_001044825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/825/GCA_001044825.1_ASM104482v1	26555390	NVH 0075-95
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.58452	31.8	-	JVJD01	125	2548	2434	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197577	GCA_001071015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/015/GCA_001071015.1_ASM107101v1	26230489	386_SEPI
Mycobacterium tuberculosis MD14847	1447508	PRJNA234631	234631	Terrabacteria group	Actinobacteria	4.41789	65.6	-	JLDY01	89	4347	4129	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584659	GCA_000650955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/955/GCA_000650955.1_Myco_tube_MD14847_V1	-	MD14847
Borrelia burgdorferi N40	521007	PRJNA29357	29357	Spirochaetes	Spirochaetia	1.33954	28.2424	chromosome:NC_017418.1/CP002228.1; plasmid N40_cp26:NC_017401.1/CP002239.1; plasmid N40_cp32-10:NC_017424.1/CP002240.1; plasmid N40_cp32-12:NC_017423.1/CP002238.1; plasmid N40_cp32-4:NC_017400.1/CP002235.1; plasmid N40_cp32-5:NC_017398.1/CP002227.1; plasmid N40_cp32-7:NC_017422.1/CP002229.1; plasmid N40_cp32-9:NC_017402.1/CP002242.1; plasmid N40_cp9:NC_017399.1/CP002231.1; plasmid N40_lp17:NC_017417.1/CP002241.1; plasmid N40_lp25:NC_017420.1/CP002234.1; plasmid N40_lp28-2:NC_017419.1/CP002232.1; plasmid N40_lp28-4:NC_017416.1/CP002236.1; plasmid N40_lp28-5:NC_017415.1/CP002233.1; plasmid N40_lp36:NC_017414.1/CP002230.1; plasmid N40_lp38:NC_017421.1/CP002237.1; plasmid N40_lp54:NC_013130.1/CP001651.1	-	17	1366	1255	11/16/10	3/30/17	Complete Genome	University of Maryland School of Medicine - Institute for Genome Sciences	SAMN02604202	GCA_000166635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/635/GCA_000166635.2_ASM16663v1	20935092	N40
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.05771	39.7	-	CMRF01	49	2282	2046	3/23/15	3/11/17	Contig	SC	SAMEA2062165	GCA_001084605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/605/GCA_001084605.1_9803_8_35	-	19F
Helicobacter pylori FD568	1191282	PRJNA165757	165757	Proteobacteria	delta/epsilon subdivisions	1.61016	38.7	-	AKHQ02	113	1638	1416	7/24/12	3/24/17	Contig	University of Malaya-Malaysian Genomics Resource Centre Berhad-University of New South Wales	SAMN00996395	GCA_000296035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/035/GCA_000296035.2_FD568	"2,301,227,824,051,310"	FD568
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.04629	52.1	-	CMYK01	176	2293	2046	3/22/15	3/17/17	Contig	SC	SAMEA1031746	GCA_001100625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/625/GCA_001100625.1_6714_3_10	-	NM2237
Streptococcus pyogenes	1314	PRJNA386535	386535	Terrabacteria group	Firmicutes	1.84841	38.3	-	NGQJ01	32	1899	1668	8/24/17	8/24/17	Contig	Christian Medical College 	SAMN06972307	GCA_002268525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/525/GCA_002268525.1_ASM226852v1	-	MUMCMC662
Leptospira interrogans serovar Bataviae str. UI 08561	1049806	PRJNA74107	74107	Spirochaetes	Spirochaetia	4.84507	35.1	-	AHNM02	222	4892	4843	1/24/12	12/5/13	Contig	J. Craig Venter Institute	SAMN02436591	GCA_000244195.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/195/GCA_000244195.3_LintUI08561v0.2	-	UI 08561
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.71274	66.2	-	JTOW01	106	6402	6201	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105695	GCA_000792625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/625/GCA_000792625.1_AZPAE14998	25367914	AZPAE14998
Acinetobacter baumannii ABNIH25	1224165	PRJNA172976	172976	Proteobacteria	Gammaproteobacteria	3.90016	39.1	-	APBM01	88	3795	3586	4/5/13	3/15/17	Contig	NISC	SAMN02470689	GCA_000353915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/915/GCA_000353915.1_ABNIH25_1	23564252	ABNIH25
Streptococcus agalactiae FSL S3-229	1154784	PRJNA86159	86159	Terrabacteria group	Firmicutes	2.20318	35.4	-	ANPV01	94	2268	2147	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN01888210	GCA_000323125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/125/GCA_000323125.1_ASM32312v1	-	FSL S3-229
Streptococcus suis	1307	PRJNA279995	279995	Terrabacteria group	Firmicutes	1.71045	41.8	-	LGKK01	260	1857	1516	9/17/15	3/18/17	Contig	USDA-ARS	SAMN03485883	GCA_001293375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/375/GCA_001293375.1_478NasalB_v1.0	26543125	SRD478
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.48914	38.3	-	FJMB01	34	3192	3064	2/20/16	3/27/17	Contig	SC	SAMEA2077988	GCA_900058865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/865/GCA_900058865.1_10625_3_72	-	2532STDY5467641
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.7484	50.7	-	CXMW01	404	5400	4588	7/16/15	2/24/17	Scaffold	SC	SAMEA2057991	GCA_001249495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/495/GCA_001249495.1_9870_6_30	-	143778
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.11909	68.1	-	LWXB01	437	7496	6726	1/31/17	4/10/17	Contig	Northern Arizona University	SAMN04208617	GCA_001977045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/045/GCA_001977045.1_ASM197704v1	-	INT2-BP61
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.05219	47.5	-	LGNI01	68	3877	3712	7/24/15	3/26/17	Contig	University of maryland	SAMN03839343	GCA_001186505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/505/GCA_001186505.1_ASM118650v1	-	EM-1652A
Clostridioides difficile	1496	PRJNA231221	231221	Terrabacteria group	Firmicutes	4.34263	29.1	-	NBTS01	2	4100	3614	4/10/17	4/13/17	Contig	US Food and Drug Administration 	SAMN04875594	GCA_002082945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/945/GCA_002082945.1_ASM208294v1	-	FDAARGOS_268
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.08874	45.3	-	JNTM02	84	4909	4681	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741358	GCA_000707225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/225/GCA_000707225.2_ASM70722v2	"2,510,376,428,330,880"	CFSAN006129
Klebsiella pneumoniae CHS 45	1438751	PRJNA234214	234214	Proteobacteria	Gammaproteobacteria	5.89311	56.9	-	JMXS01	11	5950	5678	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581347	GCA_000693855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/855/GCA_000693855.1_Kleb_pneu_CHS_45_V1	-	CHS 45
Enterococcus faecalis B83616-1	1260361	PRJNA179536	179536	Terrabacteria group	Firmicutes	2.6564	37.7	-	ATIJ01	51	2654	2553	6/25/13	3/24/17	Scaffold	The Genome Institute	SAMN02436833	GCA_000415085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/085/GCA_000415085.1_ASM41508v1	-	B83616-1
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.05882	52.6	-	MBCC01	194	2402	2079	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853009	GCA_001859545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/545/GCA_001859545.1_ASM185954v1	-	USO_IE12-079
Enterococcus faecium UC7251	1328870	PRJNA200658	200658	Terrabacteria group	Firmicutes	2.69375	37.9	-	ASAL01	197	2746	2554	6/14/13	3/24/17	Contig	Universita Cattolica del Sacro Cuore	SAMN02471390	GCA_000411655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/655/GCA_000411655.1_ASM41165v1	-	UC7251
Borrelia burgdorferi ZS7	445985	PRJNA19839	19839	Spirochaetes	Spirochaetia	1.34549	28.2349	chromosome:NC_011728.1/CP001205.1; plasmid ZS7_cp26:NC_011724.1/CP001212.1; plasmid ZS7_cp32-1:NC_011731.1/CP001206.1; plasmid ZS7_cp32-12:NC_011735.1/CP001200.1; plasmid ZS7_cp32-3+10:NC_011720.1/CP001202.1; plasmid ZS7_cp32-4:NC_011736.1/CP001208.1; plasmid ZS7_cp32-9:NC_011722.1/CP001211.1; plasmid ZS7_lp17:NC_011782.1/CP001204.1; plasmid ZS7_lp25:NC_011783.1/CP001198.1; plasmid ZS7_lp28-1:NC_011780.1/CP001210.1; plasmid ZS7_lp28-2:NC_011779.1/CP001209.1; plasmid ZS7_lp28-3:NC_011781.1/CP001203.1; plasmid ZS7_lp28-4:NC_011785.1/CP001207.1; plasmid ZS7_lp36:NC_011778.1/CP001201.1; plasmid ZS7_lp54:NC_011784.1/CP001199.1	-	15	1387	1277	12/17/08	3/29/17	Complete Genome	J. Craig Venter Institute	SAMN02603438	GCA_000021405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/405/GCA_000021405.1_ASM2140v1	20935092	ZS7
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.04128	60	-	FCJC01	17	4810	4640	1/21/16	3/27/17	Scaffold	SC	SAMEA2273990	GCA_001540245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/245/GCA_001540245.1_12082_3_22	-	2880STDY5682918
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.83806	31.1	-	FBCG01	60	1907	1787	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683122	GCA_001489215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/215/GCA_001489215.1_EC5640	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.74392	55.1	-	FJYK01	65	4669	4378	4/5/16	3/28/17	Scaffold	SC	SAMEA2273340	GCA_900075585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/585/GCA_900075585.1_11983_6_19	-	e1345
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16375	64.2	-	FSDG01	26	5166	5022	12/14/16	3/21/17	Contig	SC	SAMEA2071461	GCA_900133435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/435/GCA_900133435.1_10250_1_51	-	391
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	4.86275	55.1	-	BEEJ01	216	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089463	GCA_002333645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/645/GCA_002333645.1_ASM233364v1	-	TUM10669
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.2203	67.4	-	MEBN01	171	6654	6058	11/18/16	6/28/17	Scaffold	Menzies School of Health Research	SAMN05712683	GCA_001882865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/882/865/GCA_001882865.1_ASM188286v1	-	MSMB0686
Pseudomonas sp. NFACC19-2	1566191	PRJEB17773	353196	Proteobacteria	Gammaproteobacteria	5.10052	62.8	-	FPJD01	20	4700	4599	11/12/16	4/16/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN03159511	GCA_900119125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/125/GCA_900119125.1_IMG-taxon_2600254954_annotated_assembly	-	NFACC19-2
Streptomyces sp. B9173	1462558	PRJNA380030	380030	Terrabacteria group	Actinobacteria	8.77382	71.8	-	NAVC01	133	7765	7297	4/6/17	4/8/17	Contig	Shanghai Jiao Tong University	SAMN06626863	GCA_002081495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/495/GCA_002081495.1_ASM208149v1	-	B9173
Streptomyces sp. XY006	2021410	PRJNA394622	394622	Terrabacteria group	Actinobacteria	8.25185	72.3	-	NOKT01	74	7409	7051	7/31/17	8/3/17	Contig	Fujian Agriculture and Forestry University	SAMN07357003	GCA_002237655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/655/GCA_002237655.1_ASM223765v1	-	XY006
Pseudomonas sp. NFIX51	1566187	PRJEB20451	382918	Proteobacteria	Gammaproteobacteria	6.49578	63.1	-	FXBP01	8	5887	5730	4/21/17	5/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN03159362	GCA_900177395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/395/GCA_900177395.1_IMG-taxon_2671180172_annotated_assembly	-	NFIX51
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.48753	67.1	-	MEAS01	99	6858	6381	11/18/16	6/28/17	Scaffold	Menzies School of Health Research	SAMN05712662	GCA_001901485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/485/GCA_001901485.1_ASM190148v1	-	MSMB0063
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	4.92499	55	-	BEEK01	90	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089464	GCA_002333665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/665/GCA_002333665.1_ASM233366v1	-	TUM10670
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.02363	64.1	-	FVHO01	15	5045	4878	3/10/17	3/18/17	Contig	SC	SAMEA2070287	GCA_900133445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/445/GCA_900133445.1_10625_4_59	-	59
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.66062	55.2	-	FJYL01	32	4521	4310	4/5/16	3/28/17	Scaffold	SC	SAMEA2273341	GCA_900075595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/595/GCA_900075595.1_11983_6_20	-	e1347
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.7487	31.2	-	FBBY01	27	1843	1745	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683111	GCA_001489255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/255/GCA_001489255.1_EC5923	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.29736	59.7	-	FCHE01	28	5131	4959	1/21/16	3/27/17	Scaffold	SC	SAMEA2273922	GCA_001540265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/265/GCA_001540265.1_12082_2_57	-	2880STDY5682849
Borrelia garinii BgVir	1081646	PRJNA72847	72847	Spirochaetes	Spirochaetia	0.993811	28.2333	chromosome linear:NC_017717.1/CP003151.1; plasmid cp26:NC_017725.1/CP003201.1; plasmid lp54:NC_017804.1/CP003202.1	-	3	955	882	12/22/11	3/30/17	Complete Genome	Institute of Chemical Biology and Fundamental Medicine SB RAS	SAMN02603389	GCA_000239475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/475/GCA_000239475.1_ASM23947v1	23012288	BgVir
Enterococcus faecium E155	1303769	PRJNA192879	192879	Terrabacteria group	Firmicutes	3.06643	37.8	-	AUWX01	495	3179	3013	7/29/13	3/24/17	Contig	"Department of Medical Microbiology, University Medical Center Utrecht"	SAMN02471500	GCA_000442045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/045/GCA_000442045.1_EfmE155_v1.0	23882129	E155
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.06228	52.6	-	MBCD01	137	2409	2078	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853010	GCA_001859565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/565/GCA_001859565.1_ASM185956v1	-	USO_GC3828
Enterococcus faecalis 06-MB-S-10	1260360	PRJNA179535	179535	Terrabacteria group	Firmicutes	3.01378	37.2	-	ATIK01	99	3070	2924	6/25/13	3/24/17	Scaffold	The Genome Institute	SAMN02436834	GCA_000415105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/105/GCA_000415105.1_ASM41510v1	-	06-MB-S-10
Klebsiella pneumoniae CHS 46	1438752	PRJNA234215	234215	Proteobacteria	Gammaproteobacteria	5.89735	56.9	-	JMXT01	10	5974	5691	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581348	GCA_000693875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/875/GCA_000693875.1_Kleb_pneu_CHS_46_V1	-	CHS 46
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.20003	45.2	-	JNTZ02	40	5002	4758	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741354	GCA_000707245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/245/GCA_000707245.2_ASM70724v2	"2,510,376,428,330,880"	CFSAN001617
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.18678	28.8	-	MNBA01	259	3727	3603	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710831	GCA_002300835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/835/GCA_002300835.1_ASM230083v1	-	5475-DH/ST42
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.06405	47.5	-	LGNG01	98	3906	3730	7/24/15	3/26/17	Contig	University of maryland	SAMN03839341	GCA_001186515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/515/GCA_001186515.1_ASM118651v1	-	EM-1543
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.12263	68.2	-	LWXH01	262	7445	6810	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208623	GCA_001977055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/055/GCA_001977055.1_ASM197705v1	-	INT2-BP133
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.92721	50.7	-	CWVM01	414	5613	4751	7/16/15	2/24/17	Scaffold	SC	SAMEA3345078	GCA_001249555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/555/GCA_001249555.1_Sg_201401054_AGTCAA_L001	-	201401054_1
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.29869	38.1	-	FJDW01	41	3031	2870	2/20/16	3/27/17	Contig	SC	SAMEA2065092	GCA_900059575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/575/GCA_900059575.1_10771_3_29	-	2531STDY5467406
Streptococcus suis	1307	PRJNA350579	350579	Terrabacteria group	Firmicutes	2.07331	41	-	MNPY01	23	2094	1983	11/4/16	4/27/17	Contig	Huazhong Agricultural University	SAMN05942098	GCA_001866735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/735/GCA_001866735.1_ASM186673v1	28104658	SC19
Streptococcus agalactiae FSL S3-043	1154787	PRJNA86165	86165	Terrabacteria group	Firmicutes	2.10116	35.4	-	ANPT01	185	2196	2007	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN01888214	GCA_000323145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/145/GCA_000323145.1_ASM32314v1	-	FSL S3-043
Acinetobacter baumannii ABNIH7	1094471	PRJNA73907	73907	Proteobacteria	Gammaproteobacteria	3.95262	39.2	-	APAY01	482	4012	3544	4/5/13	3/15/17	Contig	NISC	SAMN02470696	GCA_000353975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/975/GCA_000353975.1_ABNIH7_1	23564252	ABNIH7
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.42789	66.3	-	JTOV01	91	6084	5889	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105696	GCA_000792635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/635/GCA_000792635.1_AZPAE14999	25367914	AZPAE14999
Leptospira interrogans serovar Australis str. 200703203	1085541	PRJNA74133	74133	Spirochaetes	Spirochaetia	5.01423	35.4	-	AHNY02	311	5772	5725	1/24/12	11/19/13	Contig	J. Craig Venter Institute	SAMN00739291	GCA_000244435.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/435/GCA_000244435.3_gls454115v02	-	200703203
Streptococcus pyogenes	1314	PRJNA386535	386535	Terrabacteria group	Firmicutes	1.84852	38.3	-	NGQO01	34	1902	1730	8/24/17	8/27/17	Contig	Christian Medical College 	SAMN06972302	GCA_002268555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/555/GCA_002268555.1_ASM226855v1	-	MUMCMC51
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.04012	52.1	-	CMYO01	206	2290	2046	3/22/15	3/17/17	Contig	SC	SAMEA1031726	GCA_001101725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/725/GCA_001101725.1_6714_3_11	-	NM2239
Helicobacter pylori FD577	1191283	PRJNA165757	165757	Proteobacteria	delta/epsilon subdivisions	1.6259	38.7	-	AKHR02	74	1627	1417	7/24/12	3/24/17	Contig	University of Malaya-Malaysian Genomics Resource Centre Berhad-University of New South Wales	SAMN00996396	GCA_000296055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/055/GCA_000296055.2_FD577	"2,301,227,824,051,310"	FD577
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09989	39.6	-	CMQY01	62	2309	2044	3/23/15	3/11/17	Contig	SC	SAMEA2061946	GCA_001084645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/645/GCA_001084645.1_9803_8_3	-	type strain: N
Blattabacterium sp. (Blatta orientalis) str. Tarazona	1072467	PRJNA71049	71049	FCB group	Bacteroidetes/Chlorobi group	0.638184	28.214	chromosome:NC_020195.1/CP003605.1; plasmid unnamed:NC_020196.1/CP003606.1	-	2	635	550	1/30/13	4/17/17	Complete Genome	Universitat de València	SAMN02604108	GCA_000334405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/405/GCA_000334405.1_ASM33440v1	23355305	Tarazona
Mycobacterium tuberculosis MD15050	1447509	PRJNA234633	234633	Terrabacteria group	Actinobacteria	4.38005	65.6	-	JLDX01	92	4317	4095	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584660	GCA_000650975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/975/GCA_000650975.1_Myco_tube_MD15050_V1	-	MD15050
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.62003	31.9	-	JVGQ01	63	2594	2455	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197642	GCA_001071125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/125/GCA_001071125.1_ASM107112v1	26230489	450_SEPI
Bacillus cereus	1396	PRJNA274235	274235	Terrabacteria group	Firmicutes	6.75915	34.9	-	LABP01	207	7152	6571	7/1/15	8/28/17	Scaffold	TU Muenchen	SAMN03325944	GCA_001044855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/855/GCA_001044855.1_ASM104485v1	26555390	RIVM BC 934
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.10557	37.8	-	JOYK01	33	3202	3090	7/15/14	2/26/17	Contig	Cornell University	SAMN02741519	GCA_000727205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/205/GCA_000727205.1_ASM72720v1	-	FSL R8-6138
Yersinia pestis	632	PRJNA307162	307162	Proteobacteria	Gammaproteobacteria	4.5741	47.5	-	LQAX01	255	4311	4002	4/8/16	3/28/17	Contig	"Russian Research Anti-Plague institute ""Microbe"""	SAMN04376048	GCA_001617715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/715/GCA_001617715.1_Yersinia_pestis_M-519	-	M-519
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64892	30.4	-	CUSK01	19	1745	1644	3/31/15	3/18/17	Contig	SC	SAMEA1010596	GCA_001226485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/485/GCA_001226485.1_7092_1_91	-	OXC6538
Clostridium perfringens	1502	PRJNA276414	276414	Terrabacteria group	Firmicutes	3.57123	28.2055	chromosome:NZ_CP010993.1/CP010993.1; plasmid pJFP55F:NZ_CP013041.1/CP013041.1; plasmid pJFP55G:NZ_CP013042.1/CP013042.1; plasmid pJFP55H:NZ_CP013043.1/CP013043.1; plasmid pJFP55J:NZ_CP013044.1/CP013044.1; plasmid pJFP55K:NZ_CP013045.1/CP013045.1	-	6	3287	3064	3/3/16	4/5/17	Complete Genome	"Ontario Veterinary College, University of Guelph"	SAMN03372134	GCA_001579765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/765/GCA_001579765.1_ASM157976v1	26859667	JP55
Staphylococcus aureus M0584	1158537	PRJNA88983	88983	Terrabacteria group	Firmicutes	2.89285	32.9	-	AJDD01	4	3031	2867	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809191	GCA_000361605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/605/GCA_000361605.1_Stap_aure_M0584_V1	-	M0584
Staphylococcus aureus M0586	1158538	PRJNA88985	88985	Terrabacteria group	Firmicutes	2.95358	33.1	-	AJDE01	2	3040	2871	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809192	GCA_000361625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/625/GCA_000361625.1_Stap_aure_M0586_V1	-	M0586
Clostridium botulinum	1491	PRJNA301988	301988	Terrabacteria group	Firmicutes	4.02006	28.205	chromosome:NZ_CP014148.1/CP014148.1; plasmid pNPD12_1:NZ_CP014146.1/CP014146.1; plasmid pNPD12_2:NZ_CP014147.1/CP014147.1	-	3	3886	3656	11/16/16	3/28/17	Complete Genome	Los Alamos National Laboratory	SAMN04262350	GCA_001879625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/625/GCA_001879625.1_ASM187962v1	-	CDC_67190
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.65566	30.5	-	CUSH01	15	1736	1638	3/31/15	3/18/17	Contig	SC	SAMEA1010374	GCA_001226545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/545/GCA_001226545.1_7092_1_89	-	OXC6536
Yersinia pestis	632	PRJNA307156	307156	Proteobacteria	Gammaproteobacteria	4.56233	47.5	-	LQAW01	316	4340	3935	4/8/16	3/28/17	Contig	"Russian Research Anti-Plague institute ""Microbe"""	SAMN04376042	GCA_001617735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/735/GCA_001617735.1_Yersinia_pestis_M-1763	-	M-1763
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.1048	37.8	-	JOYT01	44	3198	3083	7/15/14	2/26/17	Contig	Cornell University	SAMN02741528	GCA_000727225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/225/GCA_000727225.1_ASM72722v1	-	FSL R8-6257
Bacillus cereus	1396	PRJNA274235	274235	Terrabacteria group	Firmicutes	5.79123	35.1	-	LABQ01	78	6018	5629	7/1/15	9/18/17	Scaffold	TU Muenchen	SAMN03325945	GCA_001044875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/875/GCA_001044875.1_ASM104487v1	26555390	RIVM BC 964
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.47346	32.1	-	JVEN01	70	2450	2334	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197697	GCA_001071215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/215/GCA_001071215.1_ASM107121v1	26230489	504_SEPI
Mycobacterium tuberculosis MD13874	1447510	PRJNA234635	234635	Terrabacteria group	Actinobacteria	4.4275	65.6	-	JLDW01	98	4355	4139	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584661	GCA_000650995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/650/995/GCA_000650995.1_Myco_tube_MD13874_V1	-	MD13874
Blattabacterium sp. (Periplaneta americana) str. BPLAN	600809	PRJNA32975	32975	FCB group	Bacteroidetes/Chlorobi group	0.640442	28.2016	chromosome:NC_013418.2/CP001429.2; plasmid pBPLAN:NC_013419.1/CP001430.1	-	2	638	586	10/19/09	4/17/17	Complete Genome	University of Arizona-Tucson	SAMN02604139	GCA_000093165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/093/165/GCA_000093165.1_ASM9316v1	19880743	BPLAN
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.00704	39.7	-	CLNQ01	50	2206	1998	3/21/15	3/11/17	Contig	SC	SAMEA1028705	GCA_001084665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/665/GCA_001084665.1_6938_8_5	-	SMRU2717
Helicobacter pylori FD703	1191285	PRJNA165757	165757	Proteobacteria	delta/epsilon subdivisions	1.67648	39	-	AKHS02	88	1674	1467	7/24/12	3/24/17	Contig	University of Malaya-Malaysian Genomics Resource Centre Berhad-University of New South Wales	SAMN00996398	GCA_000296075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/075/GCA_000296075.2_FD703	"2,301,227,824,051,310"	FD703
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.04006	52.1	-	CNAC01	196	2279	2036	3/22/15	3/21/17	Contig	SC	SAMEA1031628	GCA_001103205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/205/GCA_001103205.1_6714_4_9	-	NM2617
Streptococcus pyogenes	1314	PRJNA386535	386535	Terrabacteria group	Firmicutes	1.69077	38.4	-	NGQL01	43	1676	1505	8/24/17	8/27/17	Contig	Christian Medical College 	SAMN06972305	GCA_002268575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/575/GCA_002268575.1_ASM226857v1	-	MUMCMC650
Leptospira interrogans serovar Icterohaemorrhagiae str. Verdun HP	1049910	PRJNA74135	74135	Spirochaetes	Spirochaetia	4.208	35.5	-	AHNZ02	1065	5238	5198	1/24/12	11/19/13	Contig	J. Craig Venter Institute	SAMN00739248	GCA_000244455.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/455/GCA_000244455.3_gls454116v02	-	Verdun HP
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.8582	66	-	JTOU01	108	6601	6386	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105697	GCA_000792665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/665/GCA_000792665.1_AZPAE15000	25367914	AZPAE15000
Acinetobacter baumannii ABNIH11	1094475	PRJNA73915	73915	Proteobacteria	Gammaproteobacteria	3.96818	39.1	-	APBA01	238	3911	3634	4/5/13	3/15/17	Contig	NISC	SAMN02470682	GCA_000354015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/015/GCA_000354015.1_ABNIH11_1	23564252	ABNIH11
Streptococcus agalactiae FSL S3-128	1154791	PRJNA86173	86173	Terrabacteria group	Firmicutes	2.20712	35.4	-	ANPS01	101	2267	2131	12/17/12	3/15/17	Contig	The J. Craig Venter Institute	SAMN01888209	GCA_000323165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/165/GCA_000323165.1_ASM32316v1	-	FSL S3-128
Streptococcus suis	1307	PRJDB5283	380095	Terrabacteria group	Firmicutes	2.20766	41.1	-	BDMJ01	54	2238	2067	3/10/17	5/31/17	Contig	"Laboratory of Infectious Diseases, Kitasato Institute for Life Sciences, Kitasato University"	SAMD00066479	GCA_002157605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/605/GCA_002157605.1_ASM215760v1	-	TANI1
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.42251	38.3	-	FJHQ01	35	3126	3020	2/20/16	3/27/17	Contig	SC	SAMEA1972439	GCA_900059585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/585/GCA_900059585.1_10060_4_81	-	2531STDY5467362
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.68925	50.8	-	CXJI01	377	5288	4497	7/17/15	2/24/17	Scaffold	SC	SAMEA2003901	GCA_001249575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/575/GCA_001249575.1_8289_7_94	-	87780
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.05788	68.2	-	LWXP01	266	7364	6763	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208631	GCA_001977085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/085/GCA_001977085.1_ASM197708v1	-	INT4-BP18
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.05492	47.5	-	LGNK01	131	3854	3717	7/24/15	3/26/17	Contig	University of maryland	SAMN03839345	GCA_001186565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/565/GCA_001186565.1_ASM118656v1	-	EM-1688
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.24409	28.8	-	MNBB01	76	3932	3760	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710832	GCA_002300845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/845/GCA_002300845.1_ASM230084v1	-	5477-AQ/ST26
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.12326	45.2	-	JNUI02	47	4915	4734	6/13/14	3/20/17	Contig	FDA/CFSAN	SAMN02741401	GCA_000707265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/265/GCA_000707265.2_ASM70726v2	26994080	CFSAN012493
Klebsiella pneumoniae CHS 48	1438754	PRJNA234217	234217	Proteobacteria	Gammaproteobacteria	5.72595	57	-	JMXU01	6	5691	5411	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581350	GCA_000693895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/895/GCA_000693895.1_Kleb_pneu_CHS_48_V1	-	CHS 48
Enterococcus faecalis 06-MB-S-04	1260359	PRJNA179534	179534	Terrabacteria group	Firmicutes	3.04071	37.2	-	ATIL01	120	3098	2948	6/25/13	3/24/17	Scaffold	The Genome Institute	SAMN02436835	GCA_000415125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/125/GCA_000415125.1_ASM41512v1	-	06-MB-S-04
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.06033	52.6	-	MBCE01	149	2395	2072	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853011	GCA_001859585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/585/GCA_001859585.1_ASM185958v1	-	USO_GC3831
Enterococcus faecium E525	1303770	PRJNA192893	192893	Terrabacteria group	Firmicutes	2.90443	37.9	-	AUWV01	539	2977	2814	7/29/13	3/24/17	Contig	"Department of Medical Microbiology, University Medical Center Utrecht"	SAMN02471505	GCA_000477575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/575/GCA_000477575.1_EfmE525_v1.0	23882129	E525
Clostridium botulinum	1491	PRJNA301979	301979	Terrabacteria group	Firmicutes	3.86763	28.2	chromosome:NZ_CP013247.1/CP013247.1	-	1	3673	3454	12/6/16	3/28/17	Complete Genome	Los Alamos National Laboratory	SAMN04262334	GCA_001889345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/345/GCA_001889345.1_ASM188934v1	-	CDC_53174
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.25549	60	-	FCJD01	23	4978	4825	1/21/16	3/27/17	Scaffold	SC	SAMEA2273989	GCA_001540285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/285/GCA_001540285.1_12082_3_21	-	2880STDY5682917
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.72406	31.3	-	FBKS01	23	1797	1695	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683345	GCA_001489295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/295/GCA_001489295.1_H044660164	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.78727	55.5	-	FJYM01	44	4696	4466	4/5/16	3/28/17	Scaffold	SC	SAMEA2273342	GCA_900075605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/605/GCA_900075605.1_11983_6_21	-	e1351
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.36398	64.1	-	FVHJ01	23	5533	5357	3/10/17	3/18/17	Contig	SC	SAMEA2071198	GCA_900133475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/475/GCA_900133475.1_10625_4_76	-	76
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.01452	54.7	-	BEEL01	174	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089465	GCA_002333685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/685/GCA_002333685.1_ASM233368v1	-	TUM10671
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.5528	67.3	-	MEAT01	53	6850	6459	11/18/16	6/28/17	Scaffold	Menzies School of Health Research	SAMN05712663	GCA_001901505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/505/GCA_001901505.1_ASM190150v1	-	MSMB0083
Pseudomonas sp. TJI-51	985010	PRJNA61865	61865	Proteobacteria	Gammaproteobacteria	5.8051	62.1	-	AEWE02	208	5508	5109	2/25/11	4/17/17	Scaffold	ICCBS	SAMN02470059	GCA_000190455.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/455/GCA_000190455.3_ASM19045v3	-	TJI-51
Streptomyces sp. 2R	1883452	PRJNA335624	335624	Terrabacteria group	Actinobacteria	8.48608	71.3	-	MCGP01	285	7641	7131	8/7/17	8/9/17	Contig	University of Copenhagen	SAMN05449203	GCA_002242735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/735/GCA_002242735.1_ASM224273v1	-	2R
Streptomyces sp. FBKL.4005	2015515	PRJNA391855	391855	Terrabacteria group	Actinobacteria	9.44186	72.7	-	NPKF01	7	8395	7936	8/14/17	8/16/17	Contig	Guizhou university	SAMN07276277	GCA_002251155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/155/GCA_002251155.1_ASM225115v1	-	FBKL.4005
Pseudomonas sp. GM24	1144326	PRJNA83075	83075	Proteobacteria	Gammaproteobacteria	6.51706	59.1	-	AKJR01	399	5883	5726	7/27/12	5/28/17	Scaffold	Oak Ridge National Lab	SAMN00839634	GCA_000282235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/235/GCA_000282235.1_Pseudomonas.strGM24_v1.0	23045501	GM24
Burkholderia ubonensis	101571	PRJNA340345	340345	Proteobacteria	Betaproteobacteria	7.01309	67.3	-	MTJZ01	65	6390	6064	1/19/17	3/29/17	Scaffold	Menzies School of Health Research	SAMN06234522	GCA_001957105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/957/105/GCA_001957105.1_ASM195710v1	-	A21
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.07113	55	-	BEEM01	161	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089466	GCA_002333705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/705/GCA_002333705.1_ASM233370v1	-	TUM10672
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.00164	64.2	-	FVHF01	21	4996	4866	3/10/17	3/18/17	Contig	SC	SAMEA2070292	GCA_900133505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/505/GCA_900133505.1_10625_4_74	-	74
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.02158	55.2	-	FJYN01	47	4939	4708	4/5/16	3/28/17	Scaffold	SC	SAMEA2273343	GCA_900075615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/615/GCA_900075615.1_11983_6_22	-	e1356
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.70258	31.3	-	FBNA01	29	1771	1684	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683404	GCA_001489315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/315/GCA_001489315.1_H081940749	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.18507	59.8	-	FCIQ01	16	4966	4804	1/21/16	3/27/17	Scaffold	SC	SAMEA2273963	GCA_001540305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/305/GCA_001540305.1_12082_2_94	-	2880STDY5682890
Campylobacter insulaenigrae NCTC 12927	1031564	PRJNA66785	66785	Proteobacteria	delta/epsilon subdivisions	1.46508	28.2	chromosome:NZ_CP007770.1/CP007770.1	-	1	1520	1433	1/7/15	4/17/17	Complete Genome	"USDA, ARS, WRRC"	SAMN03248541	GCA_000816185.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/185/GCA_000816185.1_ASM81618v1	25381664	NCTC 12927
Enterococcus faecium E1165	1303771	PRJNA192894	192894	Terrabacteria group	Firmicutes	2.78966	37.8	-	AUWW01	355	2851	2728	7/29/13	3/24/17	Contig	"Department of Medical Microbiology, University Medical Center Utrecht"	SAMN02471488	GCA_000477595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/595/GCA_000477595.1_EfmE1165_v1.0	23882129	E1165
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.06119	52.7	-	MBCF01	152	2405	2086	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853012	GCA_001859605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/605/GCA_001859605.1_ASM185960v1	-	USO_GC3839
Enterococcus faecalis F01966	1260357	PRJNA179532	179532	Terrabacteria group	Firmicutes	2.93243	37.2	-	ATIN01	120	2980	2833	6/25/13	3/24/17	Scaffold	The Genome Institute	SAMN02436775	GCA_000415165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/165/GCA_000415165.1_ASM41516v1	-	F01966
Klebsiella pneumoniae CHS 49	1438755	PRJNA234218	234218	Proteobacteria	Gammaproteobacteria	5.71877	57	-	JMXV01	9	5810	5527	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581351	GCA_000693915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/915/GCA_000693915.1_Kleb_pneu_CHS_49_V1	-	CHS 49
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.20692	45.2	-	JNUK02	56	5085	4874	6/13/14	3/20/17	Contig	FDA/CFSAN	SAMN02741392	GCA_000707285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/285/GCA_000707285.2_ASM70728v2	26994080	CFSAN007456
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.26249	28.5	-	MNBQ01	173	3939	3756	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710834	GCA_002300855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/855/GCA_002300855.1_ASM230085v1	-	5479-NonSp/ST229
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.0533	47.5	-	LGNJ01	85	3859	3713	7/24/15	3/26/17	Contig	University of maryland	SAMN03839344	GCA_001186575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/575/GCA_001186575.1_ASM118657v1	-	EM-1654
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.07949	68.1	-	LWXQ01	371	7455	6797	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208632	GCA_001977095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/095/GCA_001977095.1_ASM197709v1	-	319a
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.64755	50.7	-	CWYS01	375	5236	4453	7/16/15	2/24/17	Scaffold	SC	SAMEA2445724	GCA_001249595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/595/GCA_001249595.1_12971_8_38	-	H103520368
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.5385	38.3	-	FJKE01	59	3232	3085	2/20/16	3/27/17	Contig	SC	SAMEA2077796	GCA_900059595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/595/GCA_900059595.1_10625_3_34	-	2532STDY5467603
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.0375	41.2	-	CZDO01	34	2050	1944	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595193	GCA_900007815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/815/GCA_900007815.1_assembly_2001946	-	-
Streptococcus agalactiae PR06	1279012	PRJNA185399	185399	Terrabacteria group	Firmicutes	2.12075	35.3	-	AOSD01	67	2178	2092	4/19/13	3/15/17	Contig	Universiti Teknologi MARA	SAMN02471433	GCA_000372605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/605/GCA_000372605.1_SA_version_1	23766409	PR06
Acinetobacter baumannii ABNIH14	1094478	PRJNA73921	73921	Proteobacteria	Gammaproteobacteria	3.95992	39.4	-	APBC01	243	3942	3725	4/5/13	3/15/17	Contig	NISC	SAMN02470692	GCA_000354035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/035/GCA_000354035.1_ABNIH14_1	23564252	ABNIH14
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.58218	66.3	-	JTOT01	75	6285	6114	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105698	GCA_000792675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/675/GCA_000792675.1_AZPAE15001	25367914	AZPAE15001
Leptospira interrogans serovar Bataviae str. HAI135	1085538	PRJNA74155	74155	Spirochaetes	Spirochaetia	4.45952	35.8	-	AHOI02	731	6083	6039	1/24/12	11/19/13	Contig	J. Craig Venter Institute	SAMN00739254	GCA_000244635.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/244/635/GCA_000244635.3_gls454170v02	-	HAI135
Streptococcus pyogenes	1314	PRJNA386535	386535	Terrabacteria group	Firmicutes	1.85072	38.4	-	NGQK01	54	1852	1662	8/24/17	8/24/17	Contig	Christian Medical College 	SAMN06972306	GCA_002268585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/585/GCA_002268585.1_ASM226858v1	-	MUMCMC661
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05136	52.1	-	CMXK01	158	2302	2036	3/22/15	3/21/17	Contig	SC	SAMEA1031631	GCA_001107205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/205/GCA_001107205.1_6714_1_23	-	NM1758
Helicobacter pylori FD662	1191284	PRJNA165757	165757	Proteobacteria	delta/epsilon subdivisions	1.65945	38.9	-	AKHT02	66	1654	1450	7/24/12	3/24/17	Contig	University of Malaya-Malaysian Genomics Resource Centre Berhad-University of New South Wales	SAMN00996397	GCA_000296095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/095/GCA_000296095.2_FD662	"2,301,227,824,051,310"	FD662
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07193	39.6	-	CNTX02	130	2263	2047	3/23/15	3/15/17	Contig	SC	SAMEA1032610	GCA_001084705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/705/GCA_001084705.2_6999_5_16	-	203692
Mycoplasma bovoculi M165/69	743966	PRJNA46455	46455	Terrabacteria group	Tenericutes	0.76024	28.2	chromosome:NZ_CP007154.1/CP007154.1	-	1	622	581	1/30/14	4/17/17	Complete Genome	University of Missouri	SAMN02641634	GCA_000524555.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/555/GCA_000524555.1_ASM52455v1	24558249	M165/69
Mycobacterium tuberculosis MD14621	1447511	PRJNA234636	234636	Terrabacteria group	Actinobacteria	4.41372	65.6	-	JLDV01	99	4358	4132	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584662	GCA_000651015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/015/GCA_000651015.1_Myco_tube_MD14621_V1	-	MD14621
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.48673	32	-	JVAW01	77	2452	2317	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197792	GCA_001071395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/395/GCA_001071395.1_ASM107139v1	26230489	590_SEPI
Bacillus cereus	1396	PRJNA274235	274235	Terrabacteria group	Firmicutes	5.61892	35.1	-	LABS01	184	6074	5593	7/1/15	8/28/17	Scaffold	TU Muenchen	SAMN03325947	GCA_001044895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/895/GCA_001044895.1_ASM104489v1	26555390	WSBC 10035
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.06819	37.8	-	JOZD01	23	3133	3065	7/15/14	2/26/17	Contig	Cornell University	SAMN02741538	GCA_000727245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/245/GCA_000727245.1_ASM72724v1	-	FSL R8-6373
Yersinia pestis	632	PRJNA307216	307216	Proteobacteria	Gammaproteobacteria	4.50568	47.5	-	LQBA01	290	4243	4002	4/8/16	3/28/17	Contig	"Russian Research Anti-Plague institute ""Microbe"""	SAMN04376917	GCA_001617785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/785/GCA_001617785.1_Yersinia_pestis_M-549	-	M-549
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66391	30.4	-	CUOR01	19	1754	1653	3/31/15	3/18/17	Contig	SC	SAMEA1010432	GCA_001226665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/665/GCA_001226665.1_7065_7_9	-	OXC6355
Clostridium botulinum H04402 065	941968	PRJEA61511	61511	Terrabacteria group	Firmicutes	3.91974	28.2	chromosome:NC_017299.1/FR773526.1	-	1	3757	3397	2/8/11	3/23/17	Complete Genome	"The Institute of Food Research, Norwich"	SAMEA2272270	GCA_000253195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/195/GCA_000253195.1_ASM25319v1	21378191	H04402 065
Staphylococcus aureus M0602	1158689	PRJNA88677	88677	Terrabacteria group	Firmicutes	2.91739	32.9	-	AIXI01	7	3048	2886	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809059	GCA_000361645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/645/GCA_000361645.1_Stap_aure_M0602_V1	-	M0602
Staphylococcus aureus M0622	1158690	PRJNA88679	88679	Terrabacteria group	Firmicutes	2.87418	32.8	-	AIXJ01	4	3009	2851	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809060	GCA_000361665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/665/GCA_000361665.1_Stap_aure_M0622_V1	-	M0622
Clostridium botulinum A2 str. Kyoto	536232	PRJNA29859	29859	Terrabacteria group	Firmicutes	4.15528	28.2	chromosome:NC_012563.1/CP001581.1	-	1	4016	3772	4/15/09	6/15/17	Complete Genome	Los Alamos National Laboratory	SAMN02603540	GCA_000022765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/765/GCA_000022765.1_ASM2276v1	-	Kyoto
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69574	30.4	-	CUKO01	17	1790	1694	3/31/15	3/18/17	Contig	SC	SAMEA1010502	GCA_001226745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/745/GCA_001226745.1_7038_3_8	-	OXC6257
Yersinia pestis	632	PRJNA307218	307218	Proteobacteria	Gammaproteobacteria	4.56996	47.5	-	LQAZ01	316	4339	4039	4/8/16	3/28/17	Contig	"Russian Research Anti-Plague institute ""Microbe"""	SAMN04376919	GCA_001617805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/805/GCA_001617805.1_Yersinia_pestis_173	-	173
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09549	37.9	-	JOYP01	18	3147	3045	7/15/14	2/26/17	Contig	Cornell University	SAMN02741524	GCA_000727255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/255/GCA_000727255.1_ASM72725v1	-	FSL R8-6208
Bacillus cereus	1396	PRJNA274235	274235	Terrabacteria group	Firmicutes	5.33342	35.4	-	LABR01	34	5667	5314	7/1/15	8/28/17	Scaffold	TU Muenchen	SAMN03325946	GCA_001044905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/044/905/GCA_001044905.1_ASM104490v1	26555390	SDA KA 96
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.535	31.8	-	JVAT01	180	2503	2379	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197795	GCA_001071415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/415/GCA_001071415.1_ASM107141v1	26230489	596_SEPI
Mycobacterium tuberculosis MD14832	1447512	PRJNA234638	234638	Terrabacteria group	Actinobacteria	4.39236	65.6	-	JLDU01	83	4322	4110	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584663	GCA_000651035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/035/GCA_000651035.1_Myco_tube_MD14832_V1	-	MD14832
Clostridium botulinum A str. Hall	441771	PRJNA19521	19521	Terrabacteria group	Firmicutes	3.76056	28.2	chromosome:NC_009698.1/CP000727.1	-	1	3499	3332	7/20/07	8/3/16	Complete Genome	Los Alamos National Laboratory	SAMN02603534	GCA_000017045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/045/GCA_000017045.1_ASM1704v1	-	Hall
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00645	39.7	-	COBY02	151	2162	1971	3/22/15	3/11/17	Contig	SC	SAMEA1463130	GCA_001084725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/725/GCA_001084725.2_7622_3_55	-	CH2053
Helicobacter pylori FD719	1191286	PRJNA165757	165757	Proteobacteria	delta/epsilon subdivisions	1.64217	39.1	-	AKHU02	79	1665	1446	7/24/12	3/24/17	Contig	University of Malaya-Malaysian Genomics Resource Centre Berhad-University of New South Wales	SAMN00996399	GCA_000296115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/115/GCA_000296115.2_FD719	"2,301,227,824,051,310"	FD719
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.06735	52	-	CMXC01	167	2335	2056	3/23/15	3/21/17	Contig	SC	SAMEA1031747	GCA_001108785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/785/GCA_001108785.1_6714_1_2	-	NM1325
Streptococcus pyogenes	1314	PRJNA386535	386535	Terrabacteria group	Firmicutes	1.86137	38.3	-	NGQP01	60	1910	1721	8/24/17	8/24/17	Contig	Christian Medical College 	SAMN06972301	GCA_002268595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/595/GCA_002268595.1_ASM226859v1	-	MUMCMC13
Leptospira interrogans serovar Lora str. TE 1992	1193028	PRJNA167233	167233	Spirochaetes	Spirochaetia	4.77884	35.1	-	AKWW02	79	4895	4850	10/17/12	11/19/13	Contig	J. Craig Venter Institute	SAMN01036683	GCA_000306275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/275/GCA_000306275.2_gls454067v02	-	TE 1992
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.80297	65.8	-	JTOS01	101	6521	6289	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105699	GCA_000792705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/705/GCA_000792705.1_AZPAE15002	25367914	AZPAE15002
Acinetobacter baumannii ABNIH15	1094479	PRJNA73923	73923	Proteobacteria	Gammaproteobacteria	3.90361	39.4	-	APBD01	242	3864	3621	4/5/13	3/15/17	Contig	NISC	SAMN02470686	GCA_000354055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/055/GCA_000354055.1_ABNIH15_1	23564252	ABNIH15
Streptococcus agalactiae SGBS020	1244099	PRJNA177833	177833	Terrabacteria group	Firmicutes	2.16327	35.4	-	AUWB01	22	2238	2133	8/26/13	3/15/17	Contig	MD Anderson Cancer Center	SAMN01774142	GCA_000454745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/745/GCA_000454745.1_Final_Assembly	-	SGBS020
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.08432	41.2	-	CZDS01	63	2084	1939	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595209	GCA_900007835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/835/GCA_900007835.1_assembly_GD-0001	-	-
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54016	38.3	-	FJKV01	62	3231	3089	2/20/16	3/27/17	Contig	SC	SAMEA2077979	GCA_900059605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/605/GCA_900059605.1_10625_3_45	-	2532STDY5467614
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.78886	50.7	-	CWVG01	378	5355	4614	7/16/15	2/24/17	Scaffold	SC	SAMEA3345074	GCA_001249615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/615/GCA_001249615.1_Sg_201400696_ACTTGA_L001	-	201400696_1
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.05098	68.2	-	LWXS01	281	7381	6773	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208634	GCA_001977125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/125/GCA_001977125.1_ASM197712v1	-	RNS7-Bp6
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	3.96164	47.5	-	LGNL01	95	3756	3623	7/24/15	3/26/17	Contig	University of maryland	SAMN03839346	GCA_001186585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/585/GCA_001186585.1_ASM118658v1	-	EM-1690A
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.44356	28.9	-	MNBR01	446	4116	3891	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710835	GCA_002300865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/865/GCA_002300865.1_ASM230086v1	-	5480-E/ST6
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.06512	45.2	-	JNSZ02	77	4891	4633	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741378	GCA_000707305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/305/GCA_000707305.2_ASM70730v2	"2,510,376,428,330,880"	CFSAN007442
Klebsiella pneumoniae CHS 50	1438756	PRJNA234219	234219	Proteobacteria	Gammaproteobacteria	5.71301	57	-	JMXW01	6	5762	5503	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581352	GCA_000693935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/935/GCA_000693935.1_Kleb_pneu_CHS_50_V1	-	CHS 50
Enterococcus faecalis 20-SD-BW-08	1260355	PRJNA179530	179530	Terrabacteria group	Firmicutes	2.78967	37.5	-	ATIP01	40	2779	2685	6/25/13	3/24/17	Scaffold	The Genome Institute	SAMN02436776	GCA_000415205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/205/GCA_000415205.1_ASM41520v1	-	20-SD-BW-08
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.10335	52.4	-	MBCG01	166	2457	2152	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853013	GCA_001859615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/615/GCA_001859615.1_ASM185961v1	-	USO_GC3842
Enterococcus faecium EnGen0150	1157445	PRJNA88319	88319	Terrabacteria group	Firmicutes	2.76847	37.9	-	AITP01	30	2829	2648	5/3/13	3/24/17	Contig	Broad Institute	SAMN00808975	GCA_000478305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/305/GCA_000478305.1_Ente_faec_H17494_V1	-	H17494
Clostridium botulinum A str. ATCC 19397	441770	PRJNA19517	19517	Terrabacteria group	Firmicutes	3.86345	28.2	chromosome:NC_009697.1/CP000726.1	-	1	3743	3589	7/20/07	3/22/17	Complete Genome	Los Alamos National Laboratory	SAMN02603532	GCA_000017025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/025/GCA_000017025.1_ASM1702v1	18060065	ATCC 19397
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.01026	60.2	-	FCIP01	19	4730	4566	1/21/16	3/27/17	Scaffold	SC	SAMEA2273964	GCA_001540325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/325/GCA_001540325.1_12082_2_95	-	2880STDY5682891
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.81868	31	-	FBMD01	51	1888	1777	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683384	GCA_001489335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/335/GCA_001489335.1_UNOR10622c	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.28308	54.6	-	FJYO01	70	5307	5039	4/5/16	3/28/17	Scaffold	SC	SAMEA2273344	GCA_900075625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/625/GCA_900075625.1_11983_6_23	-	e1379
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.20334	64	-	FVLL01	13	5251	5129	3/10/17	3/18/17	Contig	SC	SAMEA2071538	GCA_900133845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/845/GCA_900133845.1_10250_1_57	-	397
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	4.98436	55	-	BEEN01	123	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089467	GCA_002333725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/725/GCA_002333725.1_ASM233372v1	-	TUM10673
Pseudomonas sp. CF150	911240	PRJNA59593	59593	Proteobacteria	Gammaproteobacteria	6.08791	59.8	-	ATLQ01	95	5625	5425	6/27/13	4/17/17	Scaffold	Boise State University	SAMN02469399	GCA_000416175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/175/GCA_000416175.1_ASM41617v1	-	CF150
Streptomyces sp. alain-838	2026340	PRJNA397822	397822	Terrabacteria group	Actinobacteria	8.39038	71.9	-	NQNW01	581	7890	6333	8/29/17	8/29/17	Contig	UAE University	SAMN07488462	GCA_002276245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/245/GCA_002276245.1_ASM227624v1	-	alain-838
Streptomyces sp. Alain-F2R5	2026341	PRJNA397822	397822	Terrabacteria group	Actinobacteria	8.08337	71.9	-	NQOS01	679	7566	6646	8/29/17	8/29/17	Contig	UAE University	SAMN07488463	GCA_002277855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/855/GCA_002277855.1_ASM227785v1	-	Alain-F2R5
Pseudomonas sp. CF161	911241	PRJNA59595	59595	Proteobacteria	Gammaproteobacteria	6.90814	62.6	-	ATLP01	132	6418	6140	6/27/13	4/17/17	Scaffold	Boise State University	SAMN02469404	GCA_000416215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/215/GCA_000416215.1_ASM41621v1	-	CF161
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.06974	55	-	BEEO01	146	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089468	GCA_002333745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/745/GCA_002333745.1_ASM233374v1	-	TUM10674
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.12662	64.2	-	FSDV01	25	5118	4979	12/14/16	3/21/17	Contig	SC	SAMEA1969436	GCA_900133855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/855/GCA_900133855.1_10250_1_54	-	394
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.00225	55	-	FJYQ01	71	4920	4657	4/5/16	3/28/17	Scaffold	SC	SAMEA2273345	GCA_900075635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/635/GCA_900075635.1_11983_6_24	-	e1386
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65917	31.4	-	FBHJ01	24	1717	1627	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683257	GCA_001489355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/355/GCA_001489355.1_EC3478	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.22445	59.8	-	FCKX01	21	5016	4859	1/21/16	3/27/17	Scaffold	SC	SAMEA2274042	GCA_001540345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/345/GCA_001540345.1_12082_3_67	-	2880STDY5682970
Clostridium botulinum B1 str. Okra	498213	PRJNA28505	28505	Terrabacteria group	Firmicutes	4.10701	28.1949	chromosome:NC_010516.1/CP000939.1; plasmid pCLD:NC_010379.1/CP000940.1	-	2	3994	3775	2/28/08	6/15/17	Complete Genome	Los Alamos National Laboratory	SAMN02603535	GCA_000019305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/305/GCA_000019305.1_ASM1930v1	18060065	Okra
Enterococcus faecium UC8668	1400822	PRJNA219060	219060	Terrabacteria group	Firmicutes	2.90506	38.2	-	AWWN01	105	2949	2740	11/26/13	3/24/17	Contig	Universita Cattolica del Sacro Cuore	SAMN02471388	GCA_000499905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/905/GCA_000499905.1_1st_assembly	-	UC8668
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.06164	52.6	-	MBCH01	142	2411	2078	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853014	GCA_001859635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/635/GCA_001859635.1_ASM185963v1	-	USO_GC3861
Enterococcus faecalis 20.SD.W.06	1258582	PRJNA179390	179390	Terrabacteria group	Firmicutes	2.84403	37.3	-	ATIQ01	66	2842	2720	6/25/13	3/24/17	Scaffold	The Genome Institute	SAMN02436707	GCA_000415225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/225/GCA_000415225.1_ASM41522v1	-	20.SD.W.06
Klebsiella pneumoniae CHS 51	1438757	PRJNA234220	234220	Proteobacteria	Gammaproteobacteria	5.72364	57	-	JMXX01	18	5832	5556	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581353	GCA_000693955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/955/GCA_000693955.1_Kleb_pneu_CHS_51_V1	-	CHS 51
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.08985	45.3	-	JNTN02	60	4895	4690	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741360	GCA_000707325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/325/GCA_000707325.2_ASM70732v2	"2,510,376,428,330,880"	CFSAN006131
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.07839	28.4	-	MNBT01	75	3752	3605	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710837	GCA_002300915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/915/GCA_002300915.1_ASM230091v1	-	5482-L/ST55
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.05607	47.5	-	LGNM01	78	3883	3712	7/24/15	3/26/17	Contig	University of maryland	SAMN03839347	GCA_001186595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/595/GCA_001186595.1_ASM118659v1	-	EM-1690
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.1396	68.2	-	LWXR01	229	7431	6841	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208633	GCA_001977135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/135/GCA_001977135.1_ASM197713v1	-	RNS3-Bp1
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.40175	50.8	-	CXBV01	417	4669	4171	7/16/15	2/24/17	Scaffold	SC	SAMEA954853	GCA_001249635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/635/GCA_001249635.1_5236_2_9	-	ShIB2008_440761
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.51537	38.3	-	FJCW01	40	3238	3092	2/20/16	3/27/17	Contig	SC	SAMEA2064214	GCA_900059935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/935/GCA_900059935.1_10771_3_14	-	2531STDY5467391
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.02217	41.4	-	CZED01	92	2115	1879	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595175	GCA_900007855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/855/GCA_900007855.1_assembly_6555	-	-
Streptococcus agalactiae SGBS005	1244092	PRJNA177826	177826	Terrabacteria group	Firmicutes	2.06981	35.3	-	AUVU01	25	2122	2007	8/26/13	3/15/17	Contig	MD Anderson Cancer Center	SAMN01774135	GCA_000454765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/765/GCA_000454765.1_Final_Assembly	-	SGBS005
Acinetobacter baumannii ABNIH16	1094480	PRJNA73925	73925	Proteobacteria	Gammaproteobacteria	4.05204	39.2	-	APBE01	212	4078	3799	4/5/13	3/15/17	Contig	NISC	SAMN02470683	GCA_000354075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/075/GCA_000354075.1_ABNIH16_1	23564252	ABNIH16
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.88247	66.1	-	JTOR01	106	6580	6368	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105700	GCA_000792725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/725/GCA_000792725.1_AZPAE15003	25367914	AZPAE15003
Leptospira interrogans serovar Pyrogenes str. 200701872	1193029	PRJNA167246	167246	Spirochaetes	Spirochaetia	4.35123	35.5	-	AKWN02	527	5321	5279	10/17/12	11/19/13	Contig	J. Craig Venter Institute	SAMN01036700	GCA_000306535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/306/535/GCA_000306535.2_gls454124v02	-	200701872
Streptococcus pyogenes	1314	PRJEB14938	368662	Terrabacteria group	Firmicutes	1.86816	38.3	-	FNMM01	33	1927	1802	1/25/17	3/28/17	Contig	CHUV-UNIL	SAMEA4520969	GCA_900106395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/395/GCA_900106395.1_SP_ISR8	-	ISR
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.0595	52.1	-	CMXW01	175	2324	2070	3/22/15	3/17/17	Contig	SC	SAMEA1031730	GCA_001114605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/605/GCA_001114605.1_6714_2_15	-	NM1921
Helicobacter pylori GC26	1191287	PRJNA165757	165757	Proteobacteria	delta/epsilon subdivisions	1.62247	38.7	-	AKHV02	111	1669	1455	7/24/12	3/24/17	Contig	University of Malaya-Malaysian Genomics Resource Centre Berhad-University of New South Wales	SAMN00996400	GCA_000296135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/135/GCA_000296135.2_GC26	"2,301,227,824,051,310"	GC26
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.11012	39.5	-	CNTF02	231	2260	2050	3/23/15	3/11/17	Contig	SC	SAMEA1032471	GCA_001084745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/745/GCA_001084745.2_6999_4_22	-	144370
Clostridium botulinum A str. ATCC 3502	413999	PRJNA193	193	Terrabacteria group	Firmicutes	3.90326	28.1941	chromosome:NC_009495.1/AM412317.1; plasmid pBOT3502:NC_009496.1/AM412318.1	-	2	3786	3581	5/23/07	8/3/16	Complete Genome	Sanger Institute	SAMEA1705919	GCA_000063585.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/063/585/GCA_000063585.1_ASM6358v1	17519437	ATCC 3502
Mycobacterium tuberculosis MD15973	1447513	PRJNA234639	234639	Terrabacteria group	Actinobacteria	4.40914	65.6	-	JLDT01	92	4334	4118	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584664	GCA_000651055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/055/GCA_000651055.1_Myco_tube_MD15973_V1	-	MD15973
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.54571	31.9	-	JUZG01	134	2524	2419	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197834	GCA_001071425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/425/GCA_001071425.1_ASM107142v1	26230489	634_SEPI
Bacillus cereus	1396	PRJNA267549	267549	Terrabacteria group	Firmicutes	5.64212	35	-	JURN01	719	6142	5580	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198035	GCA_001058585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/585/GCA_001058585.1_ASM105858v1	26230489	820_BCER
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09962	37.8	-	JOYQ01	24	3168	3074	7/15/14	2/26/17	Contig	Cornell University	SAMN02741525	GCA_000727285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/285/GCA_000727285.1_ASM72728v1	-	FSL R8-6220
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.59538	30.5	-	CUOX01	21	1672	1555	3/31/15	3/18/17	Contig	SC	SAMEA1010498	GCA_001226825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/825/GCA_001226825.1_7065_7_96	-	OXC6446
Clostridium perfringens SM101	289380	PRJNA12521	12521	Terrabacteria group	Firmicutes	2.96009	28.1825	chromosome:CP000312.1; chromosome phage phiSM101:NC_008265.1/CP000315.1; plasmid pSM101A:CP000313.1; plasmid pSM101B:CP000314.1	-	4	2735	2619	7/26/06	1/31/14	Complete Genome	TIGR	SAMN02604026	GCA_000013845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/013/845/GCA_000013845.2_ASM1384v2	16825665	SM101
Staphylococcus aureus M0628	1158461	PRJNA88725	88725	Terrabacteria group	Firmicutes	2.82844	33	-	AIYG01	1	2922	2774	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809061	GCA_000361685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/685/GCA_000361685.1_Stap_aure_M0628_V1	-	M0628
Staphylococcus aureus M0633	1158539	PRJNA88987	88987	Terrabacteria group	Firmicutes	2.97868	33	-	AJDF01	5	3128	2961	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809193	GCA_000361705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/705/GCA_000361705.1_Stap_aure_M0633_V1	-	M0633
Borrelia burgdorferi B31	224326	PRJNA3	3	Spirochaetes	Spirochaetia	1.52121	28.1805	chromosome:NC_001318.1/AE000783.1; plasmid cp26:NC_001903.1/AE000792.1; plasmid cp32-1:NC_000948.1/AE001575.1; plasmid cp32-3:NC_000949.1/AE001576.1; plasmid cp32-4:NC_000950.1/AE001577.1; plasmid cp32-6:NC_000951.1/AE001578.1; plasmid cp32-7:NC_000952.1/AE001579.1; plasmid cp32-8:NC_000953.1/AE001580.1; plasmid cp32-9:NC_000954.1/AE001581.1; plasmid cp9:NC_001904.1/AE000791.1; plasmid lp17:NC_001849.2/AE000793.2; plasmid lp21:NC_000955.2/AE001582.2; plasmid lp25:NC_001850.1/AE000785.1; plasmid lp28-1:NC_001851.2/AE000794.2; plasmid lp28-2:NC_001852.1/AE000786.1; plasmid lp28-3:NC_001853.1/AE000784.1; plasmid lp28-4:NC_001854.1/AE000789.1; plasmid lp36:NC_001855.1/AE000788.1; plasmid lp38:NC_001856.1/AE000787.1; plasmid lp5:NC_000957.1/AE001583.1; plasmid lp54:NC_001857.2/AE000790.2; plasmid lp56:NC_000956.1/AE001584.1	-	22	1568	1390	12/17/97	8/3/16	Complete Genome	TIGR	SAMN02603966	GCA_000008685.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/685/GCA_000008685.2_ASM868v2	9403685	B31
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.73938	30.2	-	CUTW01	14	1840	1708	3/31/15	3/18/17	Contig	SC	SAMEA1401608	GCA_001226845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/845/GCA_001226845.1_7213_3_39	-	OXC6582
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.12509	37.9	-	JOYH01	27	3182	3062	7/15/14	2/26/17	Contig	Cornell University	SAMN02741516	GCA_000727305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/305/GCA_000727305.1_ASM72730v1	-	FSL R8-6112
Bacillus cereus	1396	PRJNA267549	267549	Terrabacteria group	Firmicutes	5.39109	35.2	-	JURK01	61	5726	5466	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198038	GCA_001059175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/175/GCA_001059175.1_ASM105917v1	26230489	823_BTHU
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.54914	31.9	-	JVRU01	74	2515	2406	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197352	GCA_001071485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/485/GCA_001071485.1_ASM107148v1	26230489	160_SEPI
Mycobacterium tuberculosis MD13878	1447514	PRJNA234641	234641	Terrabacteria group	Actinobacteria	4.39516	65.6	-	JLDS01	97	4330	4126	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584665	GCA_000651075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/075/GCA_000651075.1_Myco_tube_MD13878_V1	-	MD13878
Borreliella garinii	29519	PRJNA350560	350560	Spirochaetes	Spirochaetia	1.15611	28.1739	chromosome:NZ_CP018744.1/CP018744.1; plasmid cp26:NZ_CP018750.1/CP018750.1; plasmid cp32:NZ_CP018755.1/CP018755.1; plasmid cp32:NZ_CP018754.1/CP018754.1; plasmid lp28-7:NZ_CP018749.1/CP018749.1; plasmid p_lp54_linear:NZ_CP018745.1/CP018745.1; plasmid unnamed1:NZ_CP018746.1/CP018746.1; plasmid unnamed2:NZ_CP018747.1/CP018747.1; plasmid unnamed3:NZ_CP018748.1/CP018748.1; plasmid unnamed4:NZ_CP018751.1/CP018751.1; plasmid unnamed5:NZ_CP018752.1/CP018752.1; plasmid unnamed6:NZ_CP018753.1/CP018753.1	-	12	1151	1046	12/21/16	6/19/17	Complete Genome	NIH/NIAID	SAMN05941958	GCA_001922545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/545/GCA_001922545.1_ASM192254v1	-	CIP 103362
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.03588	39.7	-	CNUB02	179	2201	2004	3/23/15	3/11/17	Contig	SC	SAMEA1032659	GCA_001084765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/765/GCA_001084765.2_6999_5_19	-	209930
Helicobacter pylori R030b	1145111	PRJNA83649	83649	Proteobacteria	delta/epsilon subdivisions	1.61062	39.2	-	AMOR01	11	1583	1427	9/27/12	3/23/17	Contig	IGS	SAMN00997706	GCA_000299695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/695/GCA_000299695.1_ASM29969v1	23661595	R030b
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.03971	52.1	-	CMZM01	206	2277	2032	3/22/15	3/17/17	Contig	SC	SAMEA1031646	GCA_001119825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/825/GCA_001119825.1_6714_3_9	-	NM2232
Streptococcus pyogenes	1314	PRJEB14938	368662	Terrabacteria group	Firmicutes	1.84789	38.2	-	FNMI01	21	1886	1767	1/25/17	3/28/17	Contig	CHUV-UNIL	SAMEA4520972	GCA_900106405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/405/GCA_900106405.1_SP_ISR11	-	ISR11
Leptospira interrogans	173	PRJNA293768	293768	Spirochaetes	Spirochaetia	4.51389	35	-	LJBQ01	160	4191	4146	9/16/15	9/16/15	Contig	Universidade Federal de Pelotas	SAMN04009327	GCA_001292685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/685/GCA_001292685.1_ASM129268v1	-	Capivara
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.34508	66.4	-	JTOQ01	94	6016	5835	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105701	GCA_000792745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/745/GCA_000792745.1_AZPAE15004	25367914	AZPAE15004
Acinetobacter baumannii ABNIH17	1094481	PRJNA73927	73927	Proteobacteria	Gammaproteobacteria	4.00125	39.3	-	APBF01	306	4014	3750	4/5/13	3/15/17	Contig	NISC	SAMN02470687	GCA_000354095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/095/GCA_000354095.1_ABNIH17_1	23564252	ABNIH17
Streptococcus agalactiae SGBS004	1244091	PRJNA177825	177825	Terrabacteria group	Firmicutes	2.06197	35.3	-	AUVT01	23	2127	2007	8/26/13	3/15/17	Contig	MD Anderson Cancer Center	SAMN01774134	GCA_000454785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/785/GCA_000454785.1_Final_Assembly	-	SGBS004
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.02498	41.3	-	CZEW01	35	2023	1919	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595180	GCA_900007875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/875/GCA_900007875.1_assembly_901131	-	-
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.54766	38.3	-	FJDC01	72	3248	3097	2/20/16	3/27/17	Contig	SC	SAMEA2060127	GCA_900059945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/945/GCA_900059945.1_10060_4_86	-	2531STDY5467367
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.72861	50.9	-	CXIB01	413	5356	4567	7/16/15	2/24/17	Scaffold	SC	SAMEA2003379	GCA_001249655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/655/GCA_001249655.1_8289_7_60	-	82721
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.03129	68.2	-	LWXT01	373	7349	6664	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208635	GCA_001977165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/165/GCA_001977165.1_ASM197716v1	-	RNS8-BP1
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	3.9449	47.6	-	LGNN01	88	3783	3599	7/24/15	3/26/17	Contig	University of maryland	SAMN03839348	GCA_001186645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/645/GCA_001186645.1_ASM118664v1	-	EM-1706
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.08996	28.6	-	MNBS01	234	3667	3539	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710836	GCA_002300925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/925/GCA_002300925.1_ASM230092v1	-	5481-DH/ST42
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.12716	45.2	-	JNUJ02	34	4908	4731	6/13/14	3/20/17	Contig	FDA/CFSAN	SAMN02741402	GCA_000707345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/345/GCA_000707345.2_ASM70734v2	26994080	CFSAN012494
Klebsiella pneumoniae CHS 52	1438758	PRJNA234221	234221	Proteobacteria	Gammaproteobacteria	5.91074	56.9	-	JMXY01	10	5963	5686	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581354	GCA_000693975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/975/GCA_000693975.1_Kleb_pneu_CHS_52_V1	-	CHS 52
Enterococcus faecalis RP2S-4	1244145	PRJNA177766	177766	Terrabacteria group	Firmicutes	3.00368	37.2	-	ATIR01	84	3028	2887	6/25/13	3/27/17	Scaffold	The Genome Institute	SAMN02436777	GCA_000415245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/245/GCA_000415245.2_ASM41524v2	-	RP2S-4
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.06201	52.6	-	MBCI01	184	2399	2085	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853015	GCA_001859655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/655/GCA_001859655.1_ASM185965v1	-	USO_GC3862
Enterococcus faecium UC7256	1400823	PRJNA219051	219051	Terrabacteria group	Firmicutes	2.81632	38.1	-	AWWM01	143	2820	2582	11/26/13	3/24/17	Contig	Universita Cattolica del Sacro Cuore	SAMN02471387	GCA_000499925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/925/GCA_000499925.1_1st_assembly	-	UC7256
Borrelia afzelii Tom3107	1398490	PRJNA218503	218503	Spirochaetes	Spirochaetia	0.987652	28.1628	chromosome:NZ_CP009212.1/CP009212.1; plasmid cp26:NZ_CP009213.1/CP009213.1; plasmid lp54:NZ_CP009214.1/CP009214.1	-	3	950	905	8/18/14	4/2/17	Complete Genome	Institute of chemical biology and fundamental medicine SB RAS	SAMN02378865	GCA_000741005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/741/005/GCA_000741005.1_ASM74100v1	25540343	Tom3107
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.36658	59.8	-	FCHQ01	29	5138	4974	1/21/16	3/27/17	Scaffold	SC	SAMEA2273935	GCA_001540365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/365/GCA_001540365.1_12082_2_68	-	2880STDY5682862
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.77706	31.2	-	FBEJ01	44	1865	1761	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683176	GCA_001489395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/395/GCA_001489395.1_SS_2266	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.65456	55.7	-	FJYS01	20	4484	4307	4/5/16	3/28/17	Scaffold	SC	SAMEA2273348	GCA_900075645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/645/GCA_900075645.1_11983_6_27	-	e1408
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.86149	64.2	-	FVIH01	6	4866	4755	3/10/17	3/18/17	Contig	SC	SAMEA2070782	GCA_900133865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/865/GCA_900133865.1_10250_1_52	-	392
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.04614	55	-	BEEP01	181	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089469	GCA_002333765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/765/GCA_002333765.1_ASM233376v1	-	TUM10675
Pseudomonas sp. QTF5	1435425	PRJNA218160	218160	Proteobacteria	Gammaproteobacteria	6.01995	58.7	-	AZRW02	90	5726	5382	1/2/14	9/16/17	Scaffold	"Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences"	SAMN02442356	GCA_000512695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/695/GCA_000512695.2_ASM51269v2	-	QTF5
Streptomyces sp. 2321.6	1938840	PRJNA363952	363952	Terrabacteria group	Actinobacteria	8.18621	71	-	NSGX01	3	7329	6800	9/13/17	9/15/17	Contig	DOE Joint Genome Institute	SAMN06272754	GCA_002300315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/315/GCA_002300315.1_ASM230031v1	-	2321.6
Streptomyces sp. TLI_235	1938860	PRJNA363956	363956	Terrabacteria group	Actinobacteria	9.25477	73	-	NSGV01	12	8407	7778	9/13/17	9/15/17	Contig	DOE Joint Genome Institute	SAMN06272720	GCA_002300355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/355/GCA_002300355.1_ASM230035v1	-	TLI_235
Pseudomonas sp. LAIL14HWK12:I5	1265484	PRJNA182468	182468	Proteobacteria	Gammaproteobacteria	5.58942	62.2	-	AZUL01	54	5181	5008	1/3/14	4/9/17	Scaffold	DOE Joint Genome Institute	SAMN02597190	GCA_000527055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/055/GCA_000527055.1_ASM52705v1	-	LAIL14HWK12:I5
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	4.98142	55	-	BEEQ01	149	-	-	8/24/17	8/24/17	Scaffold	Toho University	SAMD00089470	GCA_002333785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/785/GCA_002333785.1_ASM233378v1	-	TUM10676
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.05073	64.2	-	FSDX01	34	5041	4897	12/14/16	3/21/17	Contig	SC	SAMEA2068969	GCA_900133885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/885/GCA_900133885.1_10250_1_59	-	399
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.8195	54.7	-	FJYP01	52	4727	4496	4/5/16	3/28/17	Scaffold	SC	SAMEA2273346	GCA_900075655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/655/GCA_900075655.1_11983_6_25	-	e1387
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.78154	31.1	-	FBPC01	65	1850	1724	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683458	GCA_001489415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/415/GCA_001489415.1_H121240502	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.12541	60	-	FCIE01	15	4887	4717	1/21/16	3/27/17	Scaffold	SC	SAMEA2273953	GCA_001540385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/385/GCA_001540385.1_12082_2_84	-	2880STDY5682880
Clostridium botulinum A3 str. Loch Maree	498214	PRJNA28507	28507	Terrabacteria group	Firmicutes	4.25969	28.1309	chromosome:NC_010520.1/CP000962.1; plasmid pCLK:NC_010418.1/CP000963.1	-	2	4111	3856	3/5/08	6/15/17	Complete Genome	Los Alamos National Laboratory	SAMN02603536	GCA_000019545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/545/GCA_000019545.1_ASM1954v1	18060065	Loch Maree
Enterococcus faecium UC8733	1400824	PRJNA219063	219063	Terrabacteria group	Firmicutes	2.72359	37.9	-	AWWO01	164	2805	2573	11/26/13	3/24/17	Contig	Universita Cattolica del Sacro Cuore	SAMN02471392	GCA_000499945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/945/GCA_000499945.1_1st_assembly	-	UC8733
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.06431	52.6	-	MBCJ01	144	2414	2085	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853016	GCA_001859685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/685/GCA_001859685.1_ASM185968v1	-	USO_GC3863
Enterococcus faecalis WKS-26-18-2	1244144	PRJNA177758	177758	Terrabacteria group	Firmicutes	2.89154	37.4	-	ATIY01	124	3000	2831	6/25/13	3/27/17	Scaffold	The Genome Institute	SAMN02436839	GCA_000415385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/385/GCA_000415385.2_ASM41538v2	-	WKS-26-18-2
Klebsiella pneumoniae CHS 53	1438759	PRJNA234222	234222	Proteobacteria	Gammaproteobacteria	5.88454	56.9	-	JMXZ01	42	5990	5699	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581355	GCA_000693995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/693/995/GCA_000693995.1_Kleb_pneu_CHS_53_V1	-	CHS 53
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.06195	45.2	-	JNUM02	52	4878	4639	6/13/14	3/20/17	Contig	FDA/CFSAN	SAMN02741394	GCA_000707365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/365/GCA_000707365.2_ASM70736v2	26994080	CFSAN007458
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.21206	28.4	-	MNBP01	124	3877	3726	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710833	GCA_002300935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/935/GCA_002300935.1_ASM230093v1	-	5478-N/ST10
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.03492	47.5	-	LGNQ01	87	3853	3681	7/24/15	3/26/17	Contig	University of maryland	SAMN03839351	GCA_001186655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/655/GCA_001186655.1_ASM118665v1	-	NHCC-011
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.05725	68.2	-	LWXY01	128	7314	6769	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208640	GCA_001977185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/185/GCA_001977185.1_ASM197718v1	-	Ubon-P19-Bp57
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.8035	50.7	-	CXIW01	415	5460	4652	7/16/15	2/24/17	Scaffold	SC	SAMEA2003897	GCA_001249695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/695/GCA_001249695.1_8289_7_82	-	86298
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.51376	38.3	-	FJDI01	37	3231	3092	2/20/16	3/27/17	Contig	SC	SAMEA2064216	GCA_900059955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/955/GCA_900059955.1_10771_3_20	-	2531STDY5467397
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.10248	41.2	-	CZES01	61	2101	1962	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595182	GCA_900007885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/885/GCA_900007885.1_assembly_920694	-	-
Streptococcus agalactiae SGBS003	1244090	PRJNA177824	177824	Terrabacteria group	Firmicutes	2.07582	35.3	-	AUVS01	24	2137	2023	8/26/13	3/15/17	Contig	MD Anderson Cancer Center	SAMN01774133	GCA_000454805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/805/GCA_000454805.1_Final_Assembly	-	SGBS003
Acinetobacter baumannii ABNIH18	1094482	PRJNA73929	73929	Proteobacteria	Gammaproteobacteria	3.9718	39.1	-	APBG01	188	3912	3670	4/5/13	3/15/17	Contig	NISC	SAMN02470697	GCA_000354115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/115/GCA_000354115.1_ABNIH18_1	23564252	ABNIH18
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.88949	66.1	-	JTOP01	97	6700	6488	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105702	GCA_000792765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/765/GCA_000792765.1_AZPAE15005	25367914	AZPAE15005
Leptospira interrogans serovar Canicola	211880	PRJNA324283	324283	Spirochaetes	Spirochaetia	4.52271	35	-	MABU01	106	4382	4330	7/19/16	7/19/16	Contig	Universidade Federal de Pelotas	SAMN05195243	GCA_001687505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/505/GCA_001687505.1_ASM168750v1	-	Tande
Streptococcus pyogenes	1314	PRJEB14938	368662	Terrabacteria group	Firmicutes	1.68949	38.4	-	FNMG01	16	1680	1569	1/25/17	3/28/17	Contig	CHUV-UNIL	SAMEA4520971	GCA_900106415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/415/GCA_900106415.1_SP_ISR10	-	ISR10
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05194	52	-	CMXH01	189	2306	2050	3/22/15	3/17/17	Contig	SC	SAMEA1031694	GCA_001121905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/905/GCA_001121905.1_6714_1_13	-	NM1544
Helicobacter pylori R036d	1145113	PRJNA83653	83653	Proteobacteria	delta/epsilon subdivisions	1.64026	38.9	-	AMOT01	8	1623	1440	9/27/12	3/23/17	Contig	IGS	SAMN00997707	GCA_000299715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/715/GCA_000299715.1_ASM29971v1	-	R036d
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.03874	39.7	-	CNZD02	133	2209	2011	3/23/15	3/11/17	Contig	SC	SAMEA1463048	GCA_001084785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/785/GCA_001084785.2_7553_5_55	-	NP7103
Borreliella bavariensis PBi	290434	PRJNA12554	12554	Spirochaetes	Spirochaetia	0.986914	28.1245	chromosome linear:NC_006156.1/CP000013.1; plasmid cp26:NC_006128.1/CP000014.1; plasmid lp54:NC_006129.1/CP000015.1	-	3	950	876	8/27/04	8/28/17	Complete Genome	"Fritz Lipmann Institute (former Institute of Molecular Biotechnology, IMB)"	SAMN02603240	GCA_000196215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/196/215/GCA_000196215.1_ASM19621v1	15547252	PBi
Mycobacterium tuberculosis MD14002	1447515	PRJNA234642	234642	Terrabacteria group	Actinobacteria	4.4253	65.6	-	JLDR01	100	4352	4136	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584666	GCA_000651095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/095/GCA_000651095.1_Myco_tube_MD14002_V1	-	MD14002
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.54418	32.1	-	JVRS01	88	2502	2379	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197354	GCA_001071515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/515/GCA_001071515.1_ASM107151v1	26230489	162_SEPI
Bacillus cereus	1396	PRJNA267549	267549	Terrabacteria group	Firmicutes	5.36499	35.2	-	JUOX01	585	5807	5377	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198103	GCA_001059825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/825/GCA_001059825.1_ASM105982v1	26230489	896_BCER
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09523	37.9	-	JOYR01	18	3147	3044	7/15/14	2/26/17	Contig	Cornell University	SAMN02741526	GCA_000727315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/315/GCA_000727315.1_ASM72731v1	-	FSL R8-6232
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.7047	30.4	-	CUTN01	20	1816	1724	3/31/15	3/18/17	Contig	SC	SAMEA1401650	GCA_001227065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/065/GCA_001227065.1_7213_3_30	-	OXC6573
Clostridium botulinum	1491	PRJNA301978	301978	Terrabacteria group	Firmicutes	4.08903	28.1	chromosome:NZ_CP013246.1/CP013246.1	-	1	3880	3631	11/16/16	3/28/17	Complete Genome	Los Alamos National Laboratory	SAMN04262333	GCA_001879605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/605/GCA_001879605.1_ASM187960v1	-	CDC_69094
Staphylococcus aureus M0646	1214901	PRJNA172442	172442	Terrabacteria group	Firmicutes	2.88518	32.9	-	ANZY01	7	3041	2885	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN01110270	GCA_000361725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/725/GCA_000361725.1_Stap_aure_M0646_V1	-	M0646
Staphylococcus aureus M0648	1213721	PRJNA171265	171265	Terrabacteria group	Firmicutes	2.91011	32.9	-	ANZZ01	12	3052	2884	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN01047804	GCA_000361745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/745/GCA_000361745.1_Stap_aure_M0648_V1	-	M0648
Candidatus Arthromitus sp. SFB-mouse-NL	1508644	PRJNA252553	252553	Terrabacteria group	Firmicutes	1.6549	28.1	chromosome:NZ_CP008713.1/CP008713.1	-	1	1626	1540	6/17/14	4/9/17	Complete Genome	INRA	SAMN02851311	GCA_000709435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/435/GCA_000709435.1_ASM70943v1	25035333	-
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.78233	30.1	-	CULB01	20	1883	1735	3/31/15	3/18/17	Contig	SC	SAMEA1010443	GCA_001227125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/125/GCA_001227125.1_7038_3_91	-	OXC6341
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.12659	37.9	-	JOYS01	20	3188	3084	7/15/14	2/26/17	Contig	Cornell University	SAMN02741527	GCA_000727345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/345/GCA_000727345.1_ASM72734v1	-	FSL R8-6244
Bacillus cereus	1396	PRJNA267549	267549	Terrabacteria group	Firmicutes	5.3519	35.1	-	JURL01	132	5706	5444	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198037	GCA_001077095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/095/GCA_001077095.1_ASM107709v1	26230489	822_BCER
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.53871	32.1	-	JVRP01	92	2484	2366	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197357	GCA_001071565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/565/GCA_001071565.1_ASM107156v1	26230489	165_SEPI
Mycobacterium tuberculosis MD14435	1447516	PRJNA234643	234643	Terrabacteria group	Actinobacteria	4.4214	65.6	-	JLDQ01	99	4346	4131	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584667	GCA_000651115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/115/GCA_000651115.1_Myco_tube_MD14435_V1	-	MD14435
Candidatus Arthromitus sp. SFB-mouse-Yit	1041809	PRJDA67835	67835	Terrabacteria group	Firmicutes	1.5864	28.1	chromosome:NC_017294.1/AP012209.1	-	1	1533	1461	9/16/11	4/7/17	Complete Genome	"Center for Omics and Bioinformatics, Graduate School of Frontier Sciences, University of Tokyo"	SAMD00016606	GCA_000284435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/435/GCA_000284435.1_ASM28443v1	21925114	SFB-mouse-Yit
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.15235	39.5	-	CMSF01	66	2368	2152	3/23/15	3/11/17	Contig	SC	SAMEA2062389	GCA_001084805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/805/GCA_001084805.1_9803_8_65	-	40
Helicobacter pylori R037c	1145114	PRJNA83655	83655	Proteobacteria	delta/epsilon subdivisions	1.61413	38.9	-	AMOU01	9	1609	1450	9/27/12	3/23/17	Contig	IGS	SAMN00997708	GCA_000299735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/735/GCA_000299735.1_ASM29973v1	23661595	R037c
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.04496	52.1	-	CMXN01	164	2299	2051	3/23/15	3/21/17	Contig	SC	SAMEA1031739	GCA_001123285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/285/GCA_001123285.1_6714_1_3	-	NM1359
Streptococcus pyogenes	1314	PRJEB14938	368662	Terrabacteria group	Firmicutes	1.84483	38.4	-	FNML01	30	1917	1792	1/25/17	3/28/17	Contig	CHUV-UNIL	SAMEA4520966	GCA_900106425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/425/GCA_900106425.1_SP_ISR5	-	ISR5
Leptospira interrogans serovar Copenhageni str. Fiocruz LV2769	996826	PRJNA63749	63749	Spirochaetes	Spirochaetia	4.24304	35	-	AFKE01	4451	-	-	6/7/11	11/19/13	Scaffold	J. Craig Venter Institute	SAMN00254331	GCA_000217175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/175/GCA_000217175.2_CLC_glsol110	-	Fiocruz LV2769
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.83241	66	-	JTOO01	109	6527	6297	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105703	GCA_000792785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/785/GCA_000792785.1_AZPAE15006	25367914	AZPAE15006
Acinetobacter baumannii ABNIH20	1094484	PRJNA73933	73933	Proteobacteria	Gammaproteobacteria	3.89358	39.3	-	APBI01	345	3895	3586	4/5/13	3/15/17	Contig	NISC	SAMN02470693	GCA_000354135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/135/GCA_000354135.1_ABNIH20_1	23564252	ABNIH20
Streptococcus agalactiae SGBS002	1244089	PRJNA177823	177823	Terrabacteria group	Firmicutes	2.06314	35.3	-	AUVR01	21	2112	2008	8/26/13	3/15/17	Contig	MD Anderson Cancer Center	SAMN01774132	GCA_000454825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/825/GCA_000454825.1_Final_Assembly	-	SGBS002
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.0358	41.2	-	CZEO01	34	2054	1938	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595194	GCA_900007895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/895/GCA_900007895.1_assembly_2011423	-	-
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.46568	38.3	-	FJDK01	42	3184	3064	2/20/16	3/27/17	Contig	SC	SAMEA2058274	GCA_900059965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/965/GCA_900059965.1_10771_1_4	-	2531STDY5467285
Shigella sonnei	624	PRJEB2075	203826	Proteobacteria	Gammaproteobacteria	4.86044	50.4	-	CXMA01	437	5491	4661	7/16/15	2/24/17	Scaffold	SC	SAMEA1559970	GCA_001249735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/735/GCA_001249735.1_8489_2_86	-	44672409
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.05739	68.2	-	LWXV01	146	7307	6756	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208637	GCA_001977195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/195/GCA_001977195.1_ASM197719v1	-	Ubon-P19-Bp25
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.03926	47.5	-	LGNP01	131	3829	3701	7/24/15	3/26/17	Contig	University of maryland	SAMN03839349	GCA_001186665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/665/GCA_001186665.1_ASM118666v1	-	NHCC-04
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.03528	28.4	-	MNBU01	86	3679	3544	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710838	GCA_002300955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/955/GCA_002300955.1_ASM230095v1	-	5483-L/ST55
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.21764	45.2	-	JNSO02	65	5093	4880	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741367	GCA_000707385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/385/GCA_000707385.2_ASM70738v2	"2,510,376,428,330,880"	CFSAN007431
Klebsiella pneumoniae CHS 54	1438760	PRJNA234223	234223	Proteobacteria	Gammaproteobacteria	5.91113	56.9	-	JMYA01	5	5951	5677	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581356	GCA_000694015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/015/GCA_000694015.1_Kleb_pneu_CHS_54_V1	-	CHS 54
Enterococcus faecalis VC1B-1	1244143	PRJNA177757	177757	Terrabacteria group	Firmicutes	2.877	37.3	-	ATIZ01	54	2906	2794	6/25/13	3/24/17	Scaffold	The Genome Institute	SAMN02436908	GCA_000415405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/405/GCA_000415405.1_ASM41540v1	-	VC1B-1
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.05769	52.6	-	MBCK01	154	2395	2082	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853017	GCA_001859705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/705/GCA_001859705.1_ASM185970v1	-	USO_GC3868
Enterococcus faecium UC10237	1400825	PRJNA219067	219067	Terrabacteria group	Firmicutes	2.59482	37.9	-	AWWP01	92	2600	2481	11/26/13	3/24/17	Contig	Universita Cattolica del Sacro Cuore	SAMN02471385	GCA_000499965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/965/GCA_000499965.1_1st_assembly	-	UC10237
Clostridium botulinum CDC_1436	1408283	PRJNA222585	222585	Terrabacteria group	Firmicutes	4.36567	28.0293	chromosome:NZ_CP006908.1/CP006908.1; plasmid pCBG:NZ_CP006909.1/CP006909.1	-	2	4335	4081	1/14/15	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03222820	GCA_000817935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/935/GCA_000817935.1_ASM81793v1	25489752	CDC_1436
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.12883	59.9	-	FCMO01	13	4925	4755	1/21/16	3/27/17	Scaffold	SC	SAMEA2274020	GCA_001540405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/405/GCA_001540405.1_12082_5_45	-	2880STDY5682948
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.64778	31.4	-	FBPQ01	35	1704	1611	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683474	GCA_001489435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/435/GCA_001489435.1_H063900532	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.87804	55.4	-	FJYT01	43	4820	4613	4/5/16	3/28/17	Scaffold	SC	SAMEA2273347	GCA_900075665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/665/GCA_900075665.1_11983_6_26	-	e1391
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.29544	64.1	-	FSDW01	32	5373	5258	12/14/16	3/22/17	Contig	SC	SAMEA2070784	GCA_900133895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/895/GCA_900133895.1_10250_1_58	-	398
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.07352	55	-	BEER01	163	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089471	GCA_002333805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/805/GCA_002333805.1_ASM233380v1	-	TUM10677
Pseudomonas sp. BRG-100	1524267	PRJNA255771	255771	Proteobacteria	Gammaproteobacteria	6.24666	59.6	-	JPRX01	4	5616	5421	8/5/14	4/9/17	Scaffold	Agriculture and Agri-Food Canada	SAMN02947366	GCA_000737955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/955/GCA_000737955.1_ASM73795v1	25278538	BRG-100
Streptomyces sp. Ag82_O1-15	1938855	PRJNA363972	363972	Terrabacteria group	Actinobacteria	11.734	70.1	-	NSGZ01	2	10705	9738	9/13/17	9/15/17	Contig	DOE Joint Genome Institute	SAMN06272791	GCA_002300485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/485/GCA_002300485.1_ASM230048v1	-	Ag82_O1-15
Streptomyces sp. WZ.A104	2023771	PRJNA396590	396590	Terrabacteria group	Actinobacteria	8.11608	71.2	-	NWVL01	189	7415	6922	9/27/17	9/27/17	Contig	Zhejiang Sci-Tech University	SAMN07430084	GCA_002382885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/382/885/GCA_002382885.1_WZ.A104	-	WZ.A104
Pseudomonas sp. YS-1p	1534978	PRJNA257546	257546	Proteobacteria	Gammaproteobacteria	6.38026	66.5	-	JPYP01	36	6063	5882	9/23/14	4/9/17	Scaffold	Oklahoma State University	SAMN02953214	GCA_000757505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/505/GCA_000757505.1_PRTA	25744986	YS-1p
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	4.90852	55	-	BEES01	124	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089472	GCA_002333825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/825/GCA_002333825.1_ASM233382v1	-	TUM10678
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.05014	64.2	-	FSDY01	39	5043	4897	12/14/16	3/21/17	Contig	SC	SAMEA2071539	GCA_900133905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/905/GCA_900133905.1_10250_1_60	-	400
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.94311	55.4	-	FJYR01	47	4826	4607	4/5/16	3/28/17	Scaffold	SC	SAMEA2273499	GCA_900075675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/675/GCA_900075675.1_12045_5_72	-	e1395
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66476	31.3	-	FBFH01	14	1716	1629	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683199	GCA_001489455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/455/GCA_001489455.1_EC4910	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.0561	60.1	-	FCHJ01	16	4822	4664	1/21/16	3/27/17	Scaffold	SC	SAMEA2273928	GCA_001540425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/425/GCA_001540425.1_12082_2_62	-	2880STDY5682855
Clostridium botulinum Ba4 str. 657	515621	PRJNA29077	29077	Terrabacteria group	Firmicutes	4.25777	28.0255	chromosome:NC_012658.1/CP001083.1; plasmid pCLJ:NC_012654.1/CP001081.1; plasmid pCLJ2:NC_012657.1/CP001082.1	-	3	4222	3975	5/1/09	6/15/17	Complete Genome	Los Alamos National Laboratory	SAMN02603539	GCA_000020345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/345/GCA_000020345.1_ASM2034v1	18060065	657
Enterococcus faecium VRE0576	1442604	PRJNA230770	230770	Terrabacteria group	Firmicutes	3.13285	37.6	-	JAAK01	279	3251	3019	4/14/14	3/24/17	Contig	Swedish Institue for Communicable Disease Control	SAMN02567742	GCA_000632295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/295/GCA_000632295.1_VRE0576_1.0	25153894	VRE0576
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.05841	52.6	-	MBCL01	144	2409	2077	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853018	GCA_001859715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/715/GCA_001859715.1_ASM185971v1	-	USO_GC3877
Enterococcus faecalis UP2S-6	1244142	PRJNA177756	177756	Terrabacteria group	Firmicutes	2.85914	37.4	-	ATJA01	72	2901	2767	6/25/13	3/27/17	Scaffold	The Genome Institute	SAMN02436709	GCA_000415425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/425/GCA_000415425.2_ASM41542v2	-	UP2S-6
Klebsiella pneumoniae CHS 55	1438761	PRJNA234224	234224	Proteobacteria	Gammaproteobacteria	5.96622	56.9	-	JMYB01	4	6047	5754	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581357	GCA_000694035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/035/GCA_000694035.1_Kleb_pneu_CHS_55_V1	-	CHS 55
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.15613	45.2	-	JNSM02	44	5018	4812	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741365	GCA_000707405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/405/GCA_000707405.2_ASM70740v2	"2,510,376,428,330,880"	CFSAN007429
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.07518	28.6	-	MNBV01	200	3709	3553	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710839	GCA_002300995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/995/GCA_002300995.1_ASM230099v1	-	5485-Y/ST2
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.04197	47.5	-	LGNU01	113	3872	3697	7/24/15	3/26/17	Contig	University of maryland	SAMN03839355	GCA_001186675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/675/GCA_001186675.1_ASM118667v1	-	NHCC-048
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.05795	68.2	-	LWXX01	134	7322	6769	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208639	GCA_001977225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/225/GCA_001977225.1_ASM197722v1	-	Ubon-P19-Bp45
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.70493	50.5	-	CWTP01	472	5429	4386	7/16/15	2/24/17	Scaffold	SC	SAMEA3345026	GCA_001249755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/755/GCA_001249755.1_H14088031401	-	31401ss_1
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.41296	38.3	-	FJFD01	27	3119	3014	2/20/16	3/27/17	Contig	SC	SAMEA2060126	GCA_900059975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/975/GCA_900059975.1_10060_4_84	-	2531STDY5467365
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.12463	41.1	-	CZEY01	62	2161	2013	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595214	GCA_900007905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/905/GCA_900007905.1_assembly_GD-0008	-	-
Streptococcus agalactiae SGBS006	1244093	PRJNA177827	177827	Terrabacteria group	Firmicutes	2.06144	35.3	-	AUVV01	23	2121	2008	8/26/13	3/15/17	Contig	MD Anderson Cancer Center	SAMN01774136	GCA_000454845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/845/GCA_000454845.1_Final_Assembly	-	SGBS006
Acinetobacter baumannii ABNIH24	1094488	PRJNA73941	73941	Proteobacteria	Gammaproteobacteria	3.84153	39.4	-	APBL01	379	3848	3555	4/5/13	3/15/17	Contig	NISC	SAMN02470688	GCA_000354155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/155/GCA_000354155.1_ABNIH24_1	23564252	ABNIH24
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.81481	65.8	-	JTON01	121	6594	6334	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105704	GCA_000792805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/805/GCA_000792805.1_AZPAE15007	25367914	AZPAE15007
Streptococcus pyogenes	1314	PRJEB14938	368662	Terrabacteria group	Firmicutes	1.80024	38.4	-	FNMJ01	20	1844	1747	1/25/17	3/28/17	Contig	CHUV-UNIL	SAMEA4520964	GCA_900106435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/435/GCA_900106435.1_SP_ISR3	-	ISR3
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05732	52.1	-	CMZC01	146	2321	2060	3/23/15	3/21/17	Contig	SC	SAMEA1031655	GCA_001126085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/085/GCA_001126085.1_6714_3_19	-	NM2369
Helicobacter pylori R038b	1145115	PRJNA83657	83657	Proteobacteria	delta/epsilon subdivisions	1.63276	39	-	AMOV01	14	1607	1466	9/27/12	3/23/17	Contig	IGS	SAMN00997709	GCA_000299755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/755/GCA_000299755.1_ASM29975v1	23661595	R038b
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12782	39.6	-	CNPJ02	188	2319	2112	3/23/15	3/5/17	Contig	SC	SAMEA1032643	GCA_001084865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/865/GCA_001084865.2_6952_4_15	-	472699
Borrelia duttonii Ly	412419	PRJNA18231	18231	Spirochaetes	Spirochaetia	1.57488	28.0227	chromosome:NC_011229.1/CP000976.1; plasmid pl11:NC_011224.1/CP000977.1; plasmid pl15:NC_011226.1/CP000978.1; plasmid pl165:NC_011247.1/CP000979.1; plasmid pl23:NC_011257.1/CP000980.1; plasmid pl23b:NC_011259.1/CP000981.1; plasmid pl26:NC_011261.1/CP000982.1; plasmid pl27:NC_011265.1/CP000983.1; plasmid pl28:NC_011245.1/CP000984.1; plasmid pl31:NC_011262.1/CP000991.1; plasmid pl32:NC_011264.1/CP000992.1; plasmid pl35:NC_011248.1/CP000985.1; plasmid pl36:NC_011249.1/CP000986.1; plasmid pl40:NC_011250.1/CP000987.1; plasmid pl41:NC_011251.1/CP000988.1; plasmid pl42:NC_011254.1/CP000989.1; plasmid pl70:NC_011256.1/CP000990.1	-	17	1513	1350	9/15/08	4/7/17	Complete Genome	Marseille-Nice Genopole	SAMN02603585	GCA_000019685.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/685/GCA_000019685.1_ASM1968v1	18787695	Ly
Mycobacterium tuberculosis MD14709	1447517	PRJNA234644	234644	Terrabacteria group	Actinobacteria	4.38227	65.6	-	JLDP01	90	4334	4120	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584668	GCA_000651135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/135/GCA_000651135.1_Myco_tube_MD14709_V1	-	MD14709
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.5086	32.2	-	JVRE01	69	2523	2393	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197368	GCA_001071635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/635/GCA_001071635.1_ASM107163v1	26230489	178_SEPI
Bacillus cereus	1396	PRJNA312259	312259	Terrabacteria group	Firmicutes	5.38658	35	-	LSTW01	126	5790	5438	3/3/16	3/27/17	Scaffold	China Agricultural University	SAMN04496851	GCA_001579695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/695/GCA_001579695.1_ASM157969v1	27257205	905
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.0632	37.9	-	JOYU01	26	3104	3010	7/15/14	2/26/17	Contig	Cornell University	SAMN02741529	GCA_000727355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/355/GCA_000727355.1_ASM72735v1	-	FSL R8-6271
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.68581	30.3	-	CUPW01	19	1765	1645	3/31/15	3/18/17	Contig	SC	SAMEA1010410	GCA_001227265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/265/GCA_001227265.1_7092_1_31	-	OXC6478
Clostridium botulinum	1491	PRJNA301982	301982	Terrabacteria group	Firmicutes	4.39305	28	chromosome:NZ_CP013243.1/CP013243.1	-	1	4222	3971	12/6/16	3/28/17	Complete Genome	Los Alamos National Laboratory	SAMN04262345	GCA_001889325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/325/GCA_001889325.1_ASM188932v1	-	CDC_1632
Staphylococcus aureus M0660	1213722	PRJNA171266	171266	Terrabacteria group	Firmicutes	2.9285	33	-	AOAA01	15	3084	2910	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN01047805	GCA_000361765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/765/GCA_000361765.1_Stap_aure_M0660_V1	-	M0660
Staphylococcus aureus M0663	1213723	PRJNA171267	171267	Terrabacteria group	Firmicutes	2.86693	32.9	-	AOAB01	15	3016	2850	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN01047806	GCA_000361785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/785/GCA_000361785.1_Stap_aure_M0663_V1	-	M0663
Clostridium sporogenes	1509	PRJNA285281	285281	Terrabacteria group	Firmicutes	4.14299	28	chromosome:NZ_CP011663.1/CP011663.1	-	1	3897	3649	6/5/15	4/3/17	Complete Genome	Okinawa Institute of Advanced Sciences	SAMN03742637	GCA_001020205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/020/205/GCA_001020205.1_ASM102020v1	26227598	DSM 795
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70334	30.4	-	CUVL01	20	1821	1724	3/31/15	3/18/17	Contig	SC	SAMEA1400870	GCA_001227285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/285/GCA_001227285.1_7213_3_80	-	OXC6625
Clostridium sporogenes	1509	PRJNA257694	257694	Terrabacteria group	Firmicutes	4.14198	28	chromosome:NZ_CP009225.1/CP009225.1	-	1	3896	3648	4/20/15	4/3/17	Complete Genome	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02953999	GCA_000973705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/705/GCA_000973705.1_ASM97370v1	25836262	NCIMB 10696
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.01975	37.8	-	JOYJ01	19	3095	3006	7/15/14	2/26/17	Contig	Cornell University	SAMN02741518	GCA_000727385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/385/GCA_000727385.1_ASM72738v1	-	FSL R8-6134
Bacillus cereus	1396	PRJNA293515	293515	Terrabacteria group	Firmicutes	5.71326	35.1	-	LJIT01	146	6042	5677	3/30/16	3/28/17	Scaffold	TIFN	SAMN04038491	GCA_001604665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/665/GCA_001604665.1_ASM160466v1	27257202	B4079
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.4517	32	-	JVQK01	87	2416	2303	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197388	GCA_001071645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/645/GCA_001071645.1_ASM107164v1	26230489	196_SEPI
Mycobacterium tuberculosis MD15597	1447519	PRJNA234646	234646	Terrabacteria group	Actinobacteria	4.39504	65.6	-	JLDN01	106	4342	4114	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584670	GCA_000651155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/155/GCA_000651155.1_Myco_tube_MD15597_V1	-	MD15597
Clostridium botulinum CDC_297	1408285	PRJNA222587	222587	Terrabacteria group	Firmicutes	3.89203	28	chromosome:CP006907.1	-	1	3674	3608	1/9/15	4/14/15	Complete Genome	Los Alamos National Laboratory	SAMN03222819	GCA_000816945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/945/GCA_000816945.1_ASM81694v1	-	CDC_297
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.13095	39.6	-	COAR02	161	2326	2102	3/22/15	3/15/17	Contig	SC	SAMEA1463165	GCA_001084905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/905/GCA_001084905.2_7622_2_19	-	BR1058
Helicobacter pylori R046Wa	1145116	PRJNA83659	83659	Proteobacteria	delta/epsilon subdivisions	1.58544	39.1	-	AMOW01	8	1566	1399	9/27/12	3/23/17	Contig	IGS	SAMN00997710	GCA_000299775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/775/GCA_000299775.1_ASM29977v1	23661595	R046Wa
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.03931	52.1	-	CMZE01	199	2298	2044	3/23/15	3/21/17	Contig	SC	SAMEA1031719	GCA_001126645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/645/GCA_001126645.1_6714_4_16	-	NM2810
Streptococcus pyogenes	1314	PRJEB14938	368662	Terrabacteria group	Firmicutes	1.82373	38.4	-	FNMH01	29	1897	1781	1/25/17	3/28/17	Contig	CHUV-UNIL	SAMEA4520962	GCA_900106445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/445/GCA_900106445.1_SP_ISR1	-	ISR1
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.34573	66.2	-	JTOM01	107	6103	5869	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105705	GCA_000792825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/825/GCA_000792825.1_AZPAE15008	25367914	AZPAE15008
Acinetobacter baumannii 48055	1293574	PRJNA189305	189305	Proteobacteria	Gammaproteobacteria	4.04956	39	-	AOSP01	135	3940	3793	4/9/13	3/15/17	Contig	SCELSE	SAMN02470883	GCA_000359725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/725/GCA_000359725.1_AB48055	23538992	48055
Streptococcus agalactiae SGBS001	1244088	PRJNA177822	177822	Terrabacteria group	Firmicutes	2.06034	35.3	-	AUVQ01	23	2124	2015	8/26/13	3/15/17	Contig	MD Anderson Cancer Center	SAMN01774131	GCA_000454865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/865/GCA_000454865.1_Final_Assembly	-	SGBS001
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.18301	41.2	-	CZFC01	73	2153	2035	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595218	GCA_900007915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/915/GCA_900007915.1_assembly_GD-0015	-	-
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.41405	38.3	-	FJFF01	26	3118	3015	2/20/16	3/27/17	Contig	SC	SAMEA2077497	GCA_900059985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/985/GCA_900059985.1_10625_2_39	-	2532STDY5467512
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.73585	50.7	-	CWUE01	429	5405	4503	7/17/15	2/24/17	Scaffold	SC	SAMEA3345052	GCA_001249775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/775/GCA_001249775.1_H14132053901	-	53901ss_1
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.05675	68.2	-	LWXZ01	142	7312	6752	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208641	GCA_001977245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/245/GCA_001977245.1_ASM197724v1	-	Ubon-P23-Bp05
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.04426	47.5	-	LGNS01	101	3844	3699	7/24/15	3/26/17	Contig	University of maryland	SAMN03839353	GCA_001186725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/725/GCA_001186725.1_ASM118672v1	-	NHCC-021
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.13332	28.8	-	MOPC01	132	3791	3652	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710840	GCA_002301015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/015/GCA_002301015.1_ASM230101v1	-	5486-Y/ST2
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.15148	45.2	-	JNSN02	55	5004	4812	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741366	GCA_000707425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/425/GCA_000707425.2_ASM70742v2	"2,510,376,428,330,880"	CFSAN007430
Klebsiella pneumoniae CHS 56	1438762	PRJNA234225	234225	Proteobacteria	Gammaproteobacteria	5.78364	57	-	JMYC01	12	5893	5617	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581358	GCA_000694055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/055/GCA_000694055.1_Kleb_pneu_CHS_56_V1	-	CHS 56
Enterococcus faecalis SLO2C-1	1244141	PRJNA177755	177755	Terrabacteria group	Firmicutes	2.78087	37.5	-	ATJB01	38	2774	2677	6/25/13	3/27/17	Scaffold	The Genome Institute	SAMN02436840	GCA_000415445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/445/GCA_000415445.2_ASM41544v2	-	SLO2C-1
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.0507	52.7	-	MBCM01	141	2393	2066	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853019	GCA_001859745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/745/GCA_001859745.1_ASM185974v1	-	USO_GC3879
Enterococcus faecium VRE1044	1442606	PRJNA230770	230770	Terrabacteria group	Firmicutes	3.096	37.6	-	JAAL01	178	3220	3030	4/14/14	3/24/17	Contig	Swedish Institue for Communicable Disease Control	SAMN02567768	GCA_000632315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/315/GCA_000632315.1_VRE1044_1.0	25153894	VRE1044
Candidatus Arthromitus sp. SFB-rat-Yit	1041504	PRJDA67837	67837	Terrabacteria group	Firmicutes	1.51556	28	chromosome:NC_016012.1/AP012210.1	-	1	1441	1355	9/16/11	4/17/17	Complete Genome	"Center for Omics and Bioinformatics, Graduate School of Frontier Sciences, University of Tokyo"	SAMD00016607	GCA_000283555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/555/GCA_000283555.1_ASM28355v1	21925114	SFB-rat-Yit
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.07738	60.1	-	FCLB01	17	4772	4610	1/21/16	3/27/17	Scaffold	SC	SAMEA2274048	GCA_001540445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/445/GCA_001540445.1_12082_3_72	-	2880STDY5682976
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66098	31.4	-	FBBA01	24	1719	1628	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683088	GCA_001489475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/475/GCA_001489475.1_EC3537	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.15302	54.8	-	FJYU01	34	5100	4861	4/5/16	3/28/17	Scaffold	SC	SAMEA2273350	GCA_900075685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/685/GCA_900075685.1_11983_6_29	-	e1421
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.19169	64.2	-	FSDZ01	61	5197	5045	12/14/16	3/21/17	Contig	SC	SAMEA2068970	GCA_900133915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/915/GCA_900133915.1_10250_1_62	-	402
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	4.90816	55.1	-	BEET01	155	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089473	GCA_002333845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/845/GCA_002333845.1_ASM233384v1	-	TUM10679
Pseudomonas sp. LFM046	1608357	PRJNA274268	274268	Proteobacteria	Gammaproteobacteria	5.96484	64.3	-	JYKO01	33	5502	5141	3/9/15	4/10/17	Scaffold	UNIVERSIDADE DE SAO PAULO	SAMN03299269	GCA_000949385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/385/GCA_000949385.1_ASM94938v1	26294616	LFM046
Streptomyces sp. DI166	1839783	PRJEB14488	326153	Terrabacteria group	Actinobacteria	8.87138	71.3	-	FLSP01	243	7991	7487	6/24/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04883196	GCA_900091315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/315/GCA_900091315.1_IMG-taxon_2657245700_annotated_assembly	-	DI166
Streptomyces sp. LcepLS	1839764	PRJEB14507	326366	Terrabacteria group	Actinobacteria	7.15432	73.4	-	FMCY01	193	6357	5988	8/15/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04883135	GCA_900091485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/485/GCA_900091485.1_IMG-taxon_2657245724_annotated_assembly	-	LcepLS
Pseudomonas sp. 21	1619948	PRJNA275245	275245	Proteobacteria	Gammaproteobacteria	6.32619	65.6	-	JYOA01	42	5797	5674	3/18/15	4/10/17	Scaffold	Cornell University	SAMN03340294	GCA_000955805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/955/805/GCA_000955805.1_ASM95580v1	-	21
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	4.94995	55	-	BEEU01	133	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089474	GCA_002333865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/865/GCA_002333865.1_ASM233386v1	-	TUM10680
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.04699	64.2	-	FVIL01	34	5039	4897	3/10/17	3/18/17	Contig	SC	SAMEA2070787	GCA_900133935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/935/GCA_900133935.1_10250_1_67	-	407
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.76966	55.2	-	FJYV01	26	4694	4488	4/5/16	3/28/17	Scaffold	SC	SAMEA2273351	GCA_900075695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/695/GCA_900075695.1_11983_6_30	-	e1422
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65962	31.4	-	FBLZ01	37	1714	1626	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683371	GCA_001489495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/495/GCA_001489495.1_p604D	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.22646	59.8	-	FCMI01	30	4982	4842	1/21/16	3/27/17	Scaffold	SC	SAMEA2273987	GCA_001540465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/465/GCA_001540465.1_12082_5_38	-	2880STDY5682915
Borreliella valaisiana Tom4006	1398491	PRJNA218504	218504	Spirochaetes	Spirochaetia	0.992695	27.9977	chromosome:NZ_CP009117.1/CP009117.1; plasmid cp26:NZ_CP009118.1/CP009118.1; plasmid lp54:NZ_CP009119.1/CP009119.1	-	3	956	904	8/14/14	9/25/17	Complete Genome	Institute of chemical biology and fundamental medicine SB RAS	SAMN02374895	GCA_000739475.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/475/GCA_000739475.1_ASM73947v1	25540343	Tom4006
Enterococcus faecium VRE1261	1442607	PRJNA230770	230770	Terrabacteria group	Firmicutes	3.08556	37.6	-	JAAM01	210	3218	3005	4/14/14	3/24/17	Contig	Swedish Institue for Communicable Disease Control	SAMN02567769	GCA_000632335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/335/GCA_000632335.1_VRE1261_1.0	25153894	VRE1261
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.10605	52.4	-	MBCN01	170	2457	2143	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853020	GCA_001859755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/755/GCA_001859755.1_ASM185975v1	-	USO_PL12-197
Enterococcus faecalis LA3B-2	1244140	PRJNA177754	177754	Terrabacteria group	Firmicutes	2.88771	37.3	-	ATJC01	105	2991	2793	6/25/13	3/27/17	Scaffold	The Genome Institute	SAMN02436828	GCA_000415465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/465/GCA_000415465.2_ASM41546v2	-	LA3B-2
Klebsiella pneumoniae CHS 57	1438763	PRJNA234226	234226	Proteobacteria	Gammaproteobacteria	5.90954	56.9	-	JMYD01	18	6002	5714	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581359	GCA_000694075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/075/GCA_000694075.1_Kleb_pneu_CHS_57_V1	-	CHS 57
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.17753	45.2	-	JNSP02	41	5032	4822	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741368	GCA_000707445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/445/GCA_000707445.2_ASM70744v2	"2,510,376,428,330,880"	CFSAN007432
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.10706	28.5	-	MOPE01	180	3683	3553	9/14/17	9/18/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710842	GCA_002301025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/025/GCA_002301025.1_ASM230102v1	-	5488-DH/ST42
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.04025	47.5	-	LGNT01	101	3868	3696	7/24/15	3/26/17	Contig	University of maryland	SAMN03839354	GCA_001186735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/735/GCA_001186735.1_ASM118673v1	-	NHCC-042
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.05258	68.3	-	LWYB01	217	7288	6718	1/31/17	4/29/17	Contig	Northern Arizona University	SAMN04208643	GCA_001977265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/265/GCA_001977265.1_ASM197726v1	-	Ubon-P23-Bp21
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.66745	50.7	-	CWYW01	388	5204	4484	7/16/15	2/24/17	Scaffold	SC	SAMEA2445730	GCA_001249835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/835/GCA_001249835.1_12971_8_44	-	H111200327
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.44587	38.3	-	FJFH01	22	3162	3050	2/20/16	3/27/17	Contig	SC	SAMEA1967675	GCA_900059995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/995/GCA_900059995.1_10771_3_70	-	2531STDY5467447
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.04868	41.2	-	CZFG01	37	2066	1950	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595222	GCA_900007925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/925/GCA_900007925.1_assembly_GD-0025	-	-
Streptococcus agalactiae SGBS014	1244096	PRJNA177830	177830	Terrabacteria group	Firmicutes	2.09868	35.4	-	AUVY01	28	2182	2066	8/26/13	3/15/17	Contig	MD Anderson Cancer Center	SAMN01774139	GCA_000454885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/885/GCA_000454885.1_Final_Assembly	-	SGBS014
Acinetobacter baumannii 1605	1351817	PRJNA209530	209530	Proteobacteria	Gammaproteobacteria	3.94475	39.1	-	AUWL01	170	3789	3685	7/26/13	3/15/17	Contig	JCVI	SAMN02436567	GCA_000441955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/955/GCA_000441955.1_gabv01	-	1605
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.95802	65.9	-	JTOL01	107	6723	6464	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105706	GCA_000792845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/845/GCA_000792845.1_AZPAE15009	25367914	AZPAE15009
Streptococcus pyogenes	1314	PRJEB14938	368662	Terrabacteria group	Firmicutes	1.85215	38.4	-	FNMK01	26	1915	1785	1/25/17	3/28/17	Contig	CHUV-UNIL	SAMEA4520967	GCA_900106455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/455/GCA_900106455.1_SP_ISR6	-	ISR6
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.0509	52.1	-	CMYJ01	179	2300	2045	3/23/15	3/21/17	Contig	SC	SAMEA1031684	GCA_001128885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/885/GCA_001128885.1_6714_2_24	-	NM2025
Helicobacter pylori R055a	1145117	PRJNA83661	83661	Proteobacteria	delta/epsilon subdivisions	1.63109	38.9	-	AMOX01	16	1622	1447	9/27/12	3/23/17	Contig	IGS	SAMN00997711	GCA_000299795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/795/GCA_000299795.1_ASM29979v1	-	R055a
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.04352	39.7	-	CKWW01	60	2249	2033	3/21/15	3/11/17	Contig	SC	SAMEA1025834	GCA_001084925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/925/GCA_001084925.1_6823_6_12	-	SMRU1980
Clostridium botulinum	1491	PRJNA301983	301983	Terrabacteria group	Firmicutes	4.3522	27.9701	chromosome:NZ_CP013242.1/CP013242.1; plasmid pNPD7:NZ_CP013241.1/CP013241.1	-	2	4130	3874	11/28/16	9/20/17	Complete Genome	Los Alamos National Laboratory	SAMN04262346	GCA_001886775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/775/GCA_001886775.1_ASM188677v1	-	CDC_67071
Mycobacterium tuberculosis MD14720	1447520	PRJNA234648	234648	Terrabacteria group	Actinobacteria	4.43099	65.6	-	JLDM01	99	4358	4141	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584671	GCA_000651175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/175/GCA_000651175.1_Myco_tube_MD14720_V1	-	MD14720
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.51596	31.9	-	JVRB01	68	2460	2358	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197371	GCA_001071665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/665/GCA_001071665.1_ASM107166v1	26230489	180_SEPI
Bacillus cereus	1396	PRJNA293515	293515	Terrabacteria group	Firmicutes	5.50302	34.9	-	LJJZ01	81	5812	5557	4/13/16	3/28/17	Scaffold	TIFN	SAMN04046440	GCA_001619285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/285/GCA_001619285.1_ASM161928v1	27257202	B4081
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.00878	37.8	-	JOYM01	29	3068	2978	7/15/14	2/26/17	Contig	Cornell University	SAMN02741521	GCA_000727395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/395/GCA_000727395.1_ASM72739v1	-	FSL R8-6168
Yersinia pestis KIM D27	687916	PRJNA41469	41469	Proteobacteria	Gammaproteobacteria	4.68165	47.6	-	ADDC01	9	4765	4639	12/8/09	11/18/13	Scaffold	J. Craig Venter Institute	SAMN02404405	GCA_000182705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/182/705/GCA_000182705.1_ASM18270v1	21559501	KIM D27
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.63756	30.3	-	CUKR01	19	1706	1573	3/31/15	3/18/17	Contig	SC	SAMEA1010519	GCA_001227305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/305/GCA_001227305.1_7038_3_82	-	OXC6332
Clostridium perfringens	1502	PRJNA276513	276513	Terrabacteria group	Firmicutes	4.07081	27.9548	chromosome:NZ_CP010994.1/CP010994.1; plasmid pJFP838A:NZ_CP013615.1/CP013615.1; plasmid pJFP838C:NZ_CP013040.1/CP013040.1; plasmid pJFP838D:NZ_CP013039.1/CP013039.1; plasmid pJFP838E:NZ_CP013038.1/CP013038.1	-	5	3836	3643	3/3/16	4/5/17	Complete Genome	"Ontario Veterinary College, University of Guelph"	SAMN03377063	GCA_001579785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/785/GCA_001579785.1_ASM157978v1	26859667	JP838
Staphylococcus aureus M0673	1213724	PRJNA171268	171268	Terrabacteria group	Firmicutes	2.86684	32.9	-	AOAC01	10	3011	2854	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN01047807	GCA_000361805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/805/GCA_000361805.1_Stap_aure_M0673_V1	-	M0673
Staphylococcus aureus M0676	1158691	PRJNA88681	88681	Terrabacteria group	Firmicutes	2.87707	33	-	AIXK01	6	2992	2819	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809031	GCA_000361825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/825/GCA_000361825.1_Stap_aure_M0676_V1	-	M0676
Borrelia afzelii K78	411555	PRJNA158661	158661	Spirochaetes	Spirochaetia	1.30908	27.9451	chromosome:NZ_CP009058.1/CP009058.1; plasmid cp26:NZ_CP009060.1/CP009060.1; plasmid cp32-3:NZ_CP009070.1/CP009070.1; plasmid cp32-4:NZ_CP009069.1/CP009069.1; plasmid cp32-5:NZ_CP009071.1/CP009071.1; plasmid cp32-9:NZ_CP009068.1/CP009068.1; plasmid lp17:NZ_CP009061.1/CP009061.1; plasmid lp28-1:NZ_CP009062.1/CP009062.1; plasmid lp28-2:NZ_CP009063.1/CP009063.1; plasmid lp28-3:NZ_CP009064.1/CP009064.1; plasmid lp28-4:NZ_CP009065.1/CP009065.1; plasmid lp28-8.rev8:NZ_CP009066.1/CP009066.1; plasmid lp38:NZ_CP009067.1/CP009067.1; plasmid lp54:NZ_CP009059.1/CP009059.1	-	14	1312	1227	3/25/15	4/3/17	Complete Genome	BOVAC	SAMN03024677	GCA_000962775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/775/GCA_000962775.1_ASM96277v1	25798594	K78
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64101	30.4	-	CUMS01	13	1708	1614	3/31/15	3/18/17	Contig	SC	SAMEA1010542	GCA_001227345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/345/GCA_001227345.1_7065_7_43	-	OXC6389
Yersinia pestis 9	755896	PRJNA201408	201408	Proteobacteria	Gammaproteobacteria	4.49975	47.6	-	AXDF01	141	4282	3861	10/21/13	8/24/15	Scaffold	"National Centre for Cell Science, Pune - 411007, India"	SAMN02470616	GCA_000475095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/095/GCA_000475095.2_YP009_v2	25320451	9
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.06076	37.8	-	JOYX01	30	3134	3031	7/15/14	2/26/17	Contig	Cornell University	SAMN02741532	GCA_000727405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/405/GCA_000727405.1_ASM72740v1	-	FSL R8-6313
Bacillus cereus	1396	PRJNA293515	293515	Terrabacteria group	Firmicutes	5.54023	35.2	-	LJKB01	120	5722	5385	4/13/16	3/28/17	Scaffold	TIFN	SAMN04046442	GCA_001619335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/335/GCA_001619335.1_ASM161933v1	27257202	B4083
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.58434	31.9	-	JVPW01	133	2544	2433	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197402	GCA_001071795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/795/GCA_001071795.1_ASM107179v1	26230489	21_SEPI
Mycobacterium tuberculosis MD15212	1447521	PRJNA234649	234649	Terrabacteria group	Actinobacteria	4.39645	65.6	-	JLDL01	85	4327	4122	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584672	GCA_000651195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/195/GCA_000651195.1_Myco_tube_MD15212_V1	-	MD15212
Brachyspira pilosicoli P43/6/78	1042417	PRJNA67875	67875	Spirochaetes	Spirochaetia	2.55556	27.9	chromosome:NC_019908.1/CP002873.1	-	1	2300	2057	12/19/12	4/8/17	Complete Genome	"Biomedical Science, Cornell University"	SAMN02603038	GCA_000325665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/325/665/GCA_000325665.1_ASM32566v1	23469345	P43/6/78
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.15767	39.6	-	CLNR01	66	2400	2171	3/21/15	3/4/17	Contig	SC	SAMEA1028735	GCA_001085005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/005/GCA_001085005.1_6938_8_7	-	SMRU2719
Helicobacter pylori R056a	1145118	PRJNA83663	83663	Proteobacteria	delta/epsilon subdivisions	1.64611	38.9	-	AMOY01	13	1635	1493	9/27/12	3/23/17	Contig	IGS	SAMN00997712	GCA_000299815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/815/GCA_000299815.1_ASM29981v1	23661595	R056a
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05685	52	-	CMZL01	165	2303	2053	3/23/15	3/21/17	Contig	SC	SAMEA1031667	GCA_001143785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/785/GCA_001143785.1_6714_3_6	-	NM2193
Streptococcus pyogenes	1314	PRJEB14938	368662	Terrabacteria group	Firmicutes	1.82271	38.2	-	FNMF01	18	1849	1738	1/25/17	3/28/17	Contig	CHUV-UNIL	SAMEA4520970	GCA_900106465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/465/GCA_900106465.1_SP_ISR9	-	ISR9
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.01424	65.9	-	JTOK01	117	6825	6600	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105707	GCA_000792855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/855/GCA_000792855.1_AZPAE15010	25367914	AZPAE15010
Acinetobacter baumannii TG22150	1315159	PRJNA196278	196278	Proteobacteria	Gammaproteobacteria	3.99847	38.9	-	ASFO01	131	3816	3651	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055520	GCA_000453025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/025/GCA_000453025.1_ASM45302v1	-	TG22150
Streptococcus agalactiae SGBS015	1244097	PRJNA177831	177831	Terrabacteria group	Firmicutes	2.14664	35.4	-	AUVZ01	24	2215	2094	8/26/13	3/15/17	Contig	MD Anderson Cancer Center	SAMN01774140	GCA_000454905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/905/GCA_000454905.1_Final_Assembly	-	SGBS015
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.31416	41	-	CZFR01	63	2382	2230	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595230	GCA_900007945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/945/GCA_900007945.1_assembly_GD-0050	-	-
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54088	38.3	-	FJIG01	65	3234	3087	2/20/16	3/27/17	Contig	SC	SAMEA2080678	GCA_900060005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/005/GCA_900060005.1_10625_2_62	-	2532STDY5467535
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.73363	50.7	-	CWWN01	388	5252	4556	7/16/15	2/24/17	Scaffold	SC	SAMEA2247152	GCA_001249855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/855/GCA_001249855.1_11822_8_58	-	Aug-34
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.07824	68.2	-	LWYI01	276	7361	6741	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208650	GCA_001977275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/275/GCA_001977275.1_ASM197727v1	-	Ubon-P45-Bp30
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.00646	47.5	-	LGNR01	249	3732	3637	7/24/15	3/26/17	Contig	University of maryland	SAMN03839352	GCA_001186755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/755/GCA_001186755.1_ASM118675v1	-	NHCC-019
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.31607	28.3	-	MOPD01	83	4023	3863	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710841	GCA_002301035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/035/GCA_002301035.1_ASM230103v1	-	5487-NonSp/novelST
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.38811	44.9	-	JNSQ02	47	5250	5038	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741369	GCA_000707465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/465/GCA_000707465.2_ASM70746v2	"2,510,376,428,330,880"	CFSAN007433
Klebsiella pneumoniae CHS 58	1438764	PRJNA234227	234227	Proteobacteria	Gammaproteobacteria	5.77274	56.9	-	JMYE01	16	5867	5579	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581360	GCA_000694095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/095/GCA_000694095.1_Kleb_pneu_CHS_58_V1	-	CHS 58
Enterococcus faecalis BM4654	1391469	PRJNA216997	216997	Terrabacteria group	Firmicutes	3.50898	37.8	-	AXOG01	23	3763	3578	10/22/13	3/24/17	Scaffold	Broad Institute	SAMN02333867	GCA_000479065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/065/GCA_000479065.1_Ente_faec_BM4654_V1	-	BM4654
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.13574	52.4	-	MBCO01	176	2481	2179	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853021	GCA_001859785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/785/GCA_001859785.1_ASM185978v1	-	USO_PL12-218
Enterococcus faecium VSE1036	1442605	PRJNA230770	230770	Terrabacteria group	Firmicutes	2.993	37.5	-	JAAJ01	182	3127	2914	4/14/14	3/24/17	Contig	Swedish Institue for Communicable Disease Control	SAMN02567759	GCA_000632355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/355/GCA_000632355.1_VSE1036_1.0	25153894	VSE1036
Brachyspira pilosicoli 95/1000	759914	PRJNA48097	48097	Spirochaetes	Spirochaetia	2.58644	27.9	chromosome:NC_014330.1/CP002025.1	-	1	2324	2260	7/16/10	4/7/17	Complete Genome	"Centre for Comparative Genomics, Murdoch University"	SAMN02603103	GCA_000143725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/143/725/GCA_000143725.1_ASM14372v1	20625514	95/1000
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.00403	60.1	-	FCJE01	15	4756	4598	1/21/16	3/27/17	Scaffold	SC	SAMEA2273991	GCA_001540485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/485/GCA_001540485.1_12082_3_23	-	2880STDY5682919
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65973	31.4	-	FAXR01	19	1720	1620	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683012	GCA_001489515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/515/GCA_001489515.1_EC3849	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.0217	54.9	-	FJYX01	54	4945	4724	4/5/16	3/28/17	Scaffold	SC	SAMEA2273353	GCA_900075705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/705/GCA_900075705.1_11983_6_33	-	e1425
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21467	64.1	-	FVIK01	17	5277	5151	3/10/17	3/18/17	Contig	SC	SAMEA2071542	GCA_900133945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/945/GCA_900133945.1_10250_1_69	-	409
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.03407	55	-	BEEW01	260	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089476	GCA_002333905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/905/GCA_002333905.1_ASM233390v1	-	TUM10683
Pseudomonas sp. 5	1619949	PRJNA275245	275245	Proteobacteria	Gammaproteobacteria	5.60512	59.6	-	JYOC01	84	5092	4936	3/18/15	4/10/17	Scaffold	Cornell University	SAMN03340300	GCA_000955815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/955/815/GCA_000955815.1_ASM95581v1	-	5
Streptomyces sp. DpondAA-F4a	1839771	PRJEB14556	326643	Terrabacteria group	Actinobacteria	7.32765	71.8	-	FMBZ01	239	6699	6008	8/12/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04883148	GCA_900091715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/715/GCA_900091715.1_IMG-taxon_2657245702_annotated_assembly	-	DpondAA-F4a
Streptomyces sp. DvalAA-43	1839762	PRJEB14555	326645	Terrabacteria group	Actinobacteria	9.32476	71	-	FMBW01	102	8216	7669	8/12/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04883096	GCA_900091725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/725/GCA_900091725.1_IMG-taxon_2657245701_annotated_assembly	-	DvalAA-43
Pseudomonas sp. 2(2015)	1619950	PRJNA275245	275245	Proteobacteria	Gammaproteobacteria	5.85781	62.9	-	JYOF01	80	5402	5236	3/18/15	4/10/17	Scaffold	Cornell University	SAMN03340301	GCA_000955865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/955/865/GCA_000955865.1_ASM95586v1	-	2(2015)
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	4.92905	55	-	BEEX01	202	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089477	GCA_002333925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/925/GCA_002333925.1_ASM233392v1	-	TUM10684
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.04946	64.2	-	FSEA01	32	5043	4899	12/14/16	3/21/17	Contig	SC	SAMEA2071541	GCA_900133955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/955/GCA_900133955.1_10250_1_66	-	406
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.34261	54.7	-	FJYW01	40	5313	5076	4/5/16	3/28/17	Scaffold	SC	SAMEA2273352	GCA_900075715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/715/GCA_900075715.1_11983_6_32	-	e1424
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65765	31.4	-	FBIO01	29	1710	1630	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683290	GCA_001489535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/535/GCA_001489535.1_CCN123	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.17205	60	-	FCLG01	25	4880	4724	1/21/16	3/27/17	Scaffold	SC	SAMEA2274054	GCA_001540505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/505/GCA_001540505.1_12082_3_78	-	2880STDY5682982
Borrelia afzelii PKo	390236	PRJNA68149	68149	Spirochaetes	Spirochaetia	1.40429	27.8982	chromosome:NC_017238.1/CP002933.1; plasmid cp26:NC_017229.1/CP002934.1; plasmid cp32-1:NC_017230.1/CP002937.1; plasmid cp32-11:NC_017224.1/CP002935.1; plasmid cp32-12:NC_017225.1/CP002936.1; plasmid cp32-3:NC_017226.1/CP002938.1; plasmid cp32-5:NC_017227.1/CP002939.1; plasmid cp32-7:NC_017231.1/CP002940.1; plasmid cp32-9:NC_017228.1/CP002941.1; plasmid lp17:NC_017232.1/CP002942.1; plasmid lp28-2:NC_017239.1/CP002943.1; plasmid lp28-3:NC_017233.1/CP002944.1; plasmid lp28-4:NC_017234.1/CP002945.1; plasmid lp28-7:NC_017235.1/CP002946.1; plasmid lp28-8:NC_017236.1/CP002947.1; plasmid lp32-10:NC_017240.1/CP002948.1; plasmid lp38:NC_017237.1/CP002949.1; plasmid lp54:NC_017241.1/CP002950.1	-	18	1450	1365	8/5/11	3/30/17	Complete Genome	University of Maryland School of Medicine - Institute For Genome Sciences	SAMN02604205	GCA_000222835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/835/GCA_000222835.1_ASM22283v1	22123755	PKo
Enterococcus faecium	1352	PRJNA261269	261269	Terrabacteria group	Firmicutes	2.80586	37.7	-	JRJW01	541	2811	2684	10/9/14	3/24/17	Contig	Universita Cattolica del Sacro Cuore	SAMN03070074	GCA_000764975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/975/GCA_000764975.1_ASM76497v1	-	UC7266
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.06021	52.7	-	MBCQ01	144	2397	2076	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853023	GCA_001859825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/825/GCA_001859825.1_ASM185982v1	-	USO_SI12-018
Enterococcus faecalis BM4539	1391468	PRJNA216996	216996	Terrabacteria group	Firmicutes	3.06681	37.9	-	AXOH01	5	3103	2932	10/22/13	3/24/17	Scaffold	Broad Institute	SAMN02333866	GCA_000479085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/085/GCA_000479085.1_Ente_faec_BM4539_V1	-	BM4539
Klebsiella pneumoniae CHS 59	1438765	PRJNA234228	234228	Proteobacteria	Gammaproteobacteria	5.80578	56.8	-	JMYF01	9	5882	5590	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581361	GCA_000694115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/115/GCA_000694115.1_Kleb_pneu_CHS_59_V1	-	CHS 59
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.21714	45.2	-	JNSR02	42	5084	4880	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741370	GCA_000707485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/485/GCA_000707485.2_ASM70748v2	"2,510,376,428,330,880"	CFSAN007434
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.2632	28.9	-	MOPF01	312	3939	3788	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710843	GCA_002301075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/075/GCA_002301075.1_ASM230107v1	-	5489-M/ST15
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.06305	47.5	-	LGNO01	102	3892	3717	7/24/15	3/26/17	Contig	University of maryland	SAMN03839350	GCA_001186785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/785/GCA_001186785.1_ASM118678v1	-	NHCC-05
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.05571	68.3	-	LWYA01	131	7306	6769	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208642	GCA_001977285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/285/GCA_001977285.1_ASM197728v1	-	Ubon-P23-Bp20
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.48675	50.6	-	CXCQ01	443	4772	4257	7/16/15	2/24/17	Scaffold	SC	SAMEA954605	GCA_001249875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/875/GCA_001249875.1_5236_5_2	-	PWR105_440878
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54154	38.3	-	FJJG01	59	3238	3088	2/20/16	3/27/17	Contig	SC	SAMEA2077761	GCA_900060015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/015/GCA_900060015.1_10625_3_27	-	2532STDY5467596
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.02559	41.2	-	CZFO01	36	2035	1924	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595229	GCA_900007955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/955/GCA_900007955.1_assembly_GD-0049	-	-
Streptococcus agalactiae SGBS016	1244098	PRJNA177832	177832	Terrabacteria group	Firmicutes	2.10699	35.4	-	AUWA01	25	2175	2061	8/26/13	3/15/17	Contig	MD Anderson Cancer Center	SAMN01774141	GCA_000454925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/925/GCA_000454925.1_Final_Assembly	-	SGBS016
Acinetobacter baumannii TG22190	1315160	PRJNA196279	196279	Proteobacteria	Gammaproteobacteria	4.12273	38.9	-	ASFP01	48	3985	3839	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055521	GCA_000453045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/045/GCA_000453045.1_ASM45304v1	-	TG22190
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.59034	65.9	-	JTOJ01	120	6361	6135	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105708	GCA_000792885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/885/GCA_000792885.1_AZPAE15011	25367914	AZPAE15011
Streptococcus pyogenes	1314	PRJEB14938	368662	Terrabacteria group	Firmicutes	1.84432	38.3	-	FNMP01	26	1881	1759	1/25/17	3/28/17	Contig	CHUV-UNIL	SAMEA4520968	GCA_900106475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/475/GCA_900106475.1_SP_ISR7	-	ISR7
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.07488	52.1	-	CMXV01	141	2345	2068	3/23/15	3/21/17	Contig	SC	SAMEA1031664	GCA_001148685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/685/GCA_001148685.1_6714_2_1	-	NM1797
Helicobacter pylori R32b	1145112	PRJNA83651	83651	Proteobacteria	delta/epsilon subdivisions	1.58246	38.9	-	AMOS01	10	1579	1434	9/27/12	3/23/17	Contig	IGS	SAMN00997713	GCA_000299835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/835/GCA_000299835.1_ASM29983v1	23661595	R32b
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.0811	39.7	-	CKTV01	66	2306	2085	3/21/15	3/4/17	Contig	SC	SAMEA1025801	GCA_001085065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/065/GCA_001085065.1_6823_2_1	-	SMRU1873
Borrelia mayonii	1674146	PRJNA321302	321302	Spirochaetes	Spirochaetia	1.31154	27.8791	chromosome:NZ_CP015780.1/CP015780.1; plasmid cp26:NZ_CP015781.1/CP015781.1; plasmid cp32-1:NZ_CP015782.1/CP015782.1; plasmid cp32-13:NZ_CP015783.1/CP015783.1; plasmid cp32-3:NZ_CP015784.1/CP015784.1; plasmid cp32-4:NZ_CP015785.1/CP015785.1; plasmid cp32-6:NZ_CP015786.1/CP015786.1; plasmid cp9:NZ_CP015787.1/CP015787.1; plasmid lp17:NZ_CP015788.1/CP015788.1; plasmid lp25:NZ_CP015789.1/CP015789.1; plasmid lp28-10:NZ_CP015790.1/CP015790.1; plasmid lp28-3:NZ_CP015791.1/CP015791.1; plasmid lp28-4:NZ_CP015792.1/CP015792.1; plasmid lp36:NZ_CP015793.1/CP015793.1; plasmid lp5:NZ_CP015794.1/CP015794.1; plasmid lp54:NZ_CP015795.1/CP015795.1	-	16	1290	1129	1/11/17	4/16/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04979181	GCA_001945665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/665/GCA_001945665.1_ASM194566v1	28030649	MN14-1420
Mycobacterium tuberculosis MD14437	1447522	PRJNA234650	234650	Terrabacteria group	Actinobacteria	4.40784	65.6	-	JLDK01	98	4311	4104	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584673	GCA_000651215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/215/GCA_000651215.1_Myco_tube_MD14437_V1	-	MD14437
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.43972	31.9	-	JVOZ01	129	2366	2276	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197425	GCA_001071885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/885/GCA_001071885.1_ASM107188v1	26230489	236_SEPI
Bacillus cereus	1396	PRJNA293515	293515	Terrabacteria group	Firmicutes	6.43261	35.2	-	LJKE01	142	6854	6557	4/13/16	3/28/17	Scaffold	TIFN	SAMN04046449	GCA_001619355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/355/GCA_001619355.1_ASM161935v1	27257202	B4088
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.06116	37.8	-	JOYN01	32	3134	3032	7/15/14	2/26/17	Contig	Cornell University	SAMN02741522	GCA_000727445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/445/GCA_000727445.1_ASM72744v1	-	FSL R8-6176
Yersinia pestis S3	1330536	PRJNA201413	201413	Proteobacteria	Gammaproteobacteria	4.65991	47.6	-	AXDH01	154	4507	4160	10/21/13	8/24/15	Scaffold	"National Centre for Cell Science, Pune - 411007, India"	SAMN02470613	GCA_000475135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/135/GCA_000475135.2_YPS03_v2	25320451	S3
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69535	30.4	-	CURM01	14	1816	1717	3/31/15	3/18/17	Contig	SC	SAMEA1010584	GCA_001227405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/405/GCA_001227405.1_7092_1_69	-	OXC6516
Borrelia mayonii	1674146	PRJNA321302	321302	Spirochaetes	Spirochaetia	1.30206	27.8283	chromosome:NZ_CP015796.1/CP015796.1; plasmid cp26:NZ_CP015797.1/CP015797.1; plasmid cp32-1:NZ_CP015798.1/CP015798.1; plasmid cp32-13:NZ_CP015799.1/CP015799.1; plasmid cp32-3:NZ_CP015800.1/CP015800.1; plasmid cp32-4:NZ_CP015801.1/CP015801.1; plasmid cp32-6:NZ_CP015802.1/CP015802.1; plasmid cp9:NZ_CP015962.1/CP015962.1; plasmid lp17:NZ_CP015803.1/CP015803.1; plasmid lp25:NZ_CP015804.1/CP015804.1; plasmid lp28-10:NZ_CP015805.1/CP015805.1; plasmid lp28-3:NZ_CP015806.1/CP015806.1; plasmid lp28-4:NZ_CP015807.1/CP015807.1; plasmid lp36:NZ_CP015808.1/CP015808.1; plasmid lp54:NZ_CP015809.1/CP015809.1	-	15	1280	1124	1/5/17	4/17/17	Complete Genome	Centers for Disease Control and Prevention	SAMN04979182	GCA_001936295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/295/GCA_001936295.1_ASM193629v1	28030649	MN14-1539
Staphylococcus aureus M0687	1158692	PRJNA88683	88683	Terrabacteria group	Firmicutes	2.95342	32.9	-	AIXL01	9	3086	2933	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809032	GCA_000361845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/845/GCA_000361845.1_Stap_aure_M0687_V1	-	M0687
Staphylococcus aureus M0692	1158693	PRJNA88685	88685	Terrabacteria group	Firmicutes	2.93217	33	-	AIXM01	10	3078	2911	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809033	GCA_000361865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/865/GCA_000361865.1_Stap_aure_M0692_V1	-	M0692
Brachyspira pilosicoli B2904	1133568	PRJNA80999	80999	Spirochaetes	Spirochaetia	2.76548	27.8	chromosome:NC_018607.1/CP003490.1	-	1	2547	2284	9/14/12	4/7/17	Complete Genome	Animal Health and Veterinary Laboratories Agency (AHVLA)	SAMN02602981	GCA_000296575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/575/GCA_000296575.1_ASM29657v1	22947175	B2904
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.73874	30.4	-	CUJM01	18	1843	1722	3/31/15	3/18/17	Contig	SC	SAMEA1010454	GCA_001227465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/465/GCA_001227465.1_7038_3_54	-	OXC6304
Yersinia pestis 24H	1330537	PRJNA201414	201414	Proteobacteria	Gammaproteobacteria	4.5006	47.6	-	AXDI01	141	4245	3916	10/21/13	8/24/15	Scaffold	"National Centre for Cell Science, Pune - 411007, India"	SAMN02470618	GCA_000475155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/155/GCA_000475155.2_YP24H_v2	25320451	24H
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.11844	37.9	-	JOYV01	21	3188	3088	7/15/14	2/26/17	Contig	Cornell University	SAMN02741530	GCA_000727465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/465/GCA_000727465.1_ASM72746v1	-	FSL R8-6283
Bacillus cereus	1396	PRJNA293515	293515	Terrabacteria group	Firmicutes	5.38363	35.2	-	LJKF01	91	5781	5518	4/13/16	3/28/17	Scaffold	TIFN	SAMN04046536	GCA_001619385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/385/GCA_001619385.1_ASM161938v1	27257202	B4116
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.41461	31.9	-	JVOM01	174	2374	2283	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197438	GCA_001071955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/955/GCA_001071955.1_ASM107195v1	26230489	248_SEPI
Mycobacterium tuberculosis MD16573	1447523	PRJNA234651	234651	Terrabacteria group	Actinobacteria	4.42249	65.6	-	JLDJ01	96	4345	4134	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584674	GCA_000651235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/235/GCA_000651235.1_Myco_tube_MD16573_V1	-	MD16573
Brachyspira murdochii DSM 12563	526224	PRJNA29543	29543	Spirochaetes	Spirochaetia	3.2418	27.8	chromosome:NC_014150.1/CP001959.1	-	1	2867	2762	5/13/10	4/17/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00001910	GCA_000092845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/092/845/GCA_000092845.1_ASM9284v1	21304710	DSM 12563
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.15632	39.5	-	CLPY01	85	2364	2140	3/21/15	3/4/17	Contig	SC	SAMEA1028636	GCA_001085105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/105/GCA_001085105.1_6949_3_7	-	SMRU2455
Helicobacter pylori R018c	1145110	PRJNA83647	83647	Proteobacteria	delta/epsilon subdivisions	1.64684	38.9	-	AMOQ01	15	1639	1477	9/27/12	3/23/17	Contig	IGS	SAMN00997705	GCA_000299855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/855/GCA_000299855.1_ASM29985v1	-	R018c
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05697	52	-	CMXX01	162	2314	2063	3/23/15	3/17/17	Contig	SC	SAMEA1031713	GCA_001152085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/085/GCA_001152085.1_6714_2_17	-	NM1931
Streptococcus pyogenes	1314	PRJEB14938	368662	Terrabacteria group	Firmicutes	1.80096	38.4	-	FNMO01	16	1852	1751	1/25/17	3/28/17	Contig	CHUV-UNIL	SAMEA4520965	GCA_900106485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/485/GCA_900106485.1_SP_ISR4	-	ISR4
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.46253	66.3	-	JTOI01	106	6189	5997	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105709	GCA_000792895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/895/GCA_000792895.1_AZPAE15012	25367914	AZPAE15012
Acinetobacter baumannii TG22192	1315161	PRJNA196280	196280	Proteobacteria	Gammaproteobacteria	3.98142	39	-	ASFQ01	139	3836	3678	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055522	GCA_000453065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/065/GCA_000453065.1_ASM45306v1	-	TG22192
Streptococcus agalactiae SGBS021	1244100	PRJNA177834	177834	Terrabacteria group	Firmicutes	2.09793	35.4	-	AUWC01	19	2178	2061	8/26/13	3/15/17	Contig	MD Anderson Cancer Center	SAMN01774143	GCA_000454945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/945/GCA_000454945.1_Final_Assembly	-	SGBS021
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.23703	41.2	-	CZFX01	80	2267	2097	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595234	GCA_900007965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/965/GCA_900007965.1_assembly_GD-0054	-	-
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.53709	38.3	-	FJLU01	31	3237	3109	2/20/16	3/27/17	Contig	SC	SAMEA2080803	GCA_900060025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/025/GCA_900060025.1_10625_3_92	-	2532STDY5467661
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.6845	50.7	-	CWYO01	397	5210	4465	7/17/15	2/24/17	Scaffold	SC	SAMEA2445717	GCA_001249895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/895/GCA_001249895.1_12971_8_33	-	H102640221
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.23854	68.1	-	LWYJ01	110	7503	6908	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208651	GCA_001977325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/325/GCA_001977325.1_ASM197732v1	-	MSHR0730
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.03613	47.5	-	LGOA01	91	3850	3681	7/24/15	3/26/17	Contig	University of maryland	SAMN03839360	GCA_001186805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/805/GCA_001186805.1_ASM118680v1	-	NHCC-081
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.2395	28.6	-	MOPG01	77	3930	3772	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710844	GCA_002301085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/085/GCA_002301085.1_ASM230108v1	-	5490-CF/ST37
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.13741	45.2	-	JNSS02	65	5014	4792	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741371	GCA_000707505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/505/GCA_000707505.2_ASM70750v2	"2,510,376,428,330,880"	CFSAN007435
Klebsiella pneumoniae CHS 61	1438767	PRJNA234230	234230	Proteobacteria	Gammaproteobacteria	5.69277	57.1	-	JMYG01	8	5740	5494	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581363	GCA_000694135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/135/GCA_000694135.1_Kleb_pneu_CHS_61_V1	-	CHS 61
Enterococcus faecalis JH2-2	1320322	PRJNA216995	216995	Terrabacteria group	Firmicutes	2.89927	37.6	-	AXOI01	2	2958	2776	10/22/13	3/24/17	Scaffold	Broad Institute	SAMN02333865	GCA_000479105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/105/GCA_000479105.1_Ente_faec_JH2-2_V1	-	JH2-2
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.09813	52.6	-	MBCR01	151	2437	2131	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853024	GCA_001859835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/835/GCA_001859835.1_ASM185983v1	-	USO_SI12-044
Enterococcus faecium	1352	PRJNA261117	261117	Terrabacteria group	Firmicutes	2.807	37.8	-	JRHQ01	703	2869	2578	10/9/14	3/25/17	Contig	Universita Cattolica del Sacro Cuore	SAMN03069111	GCA_000764985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/985/GCA_000764985.1_ASM76498v1	-	UC7265
Onion yellows phytoplasma OY-M	262768	PRJNA9615	9615	Terrabacteria group	Tenericutes	0.853092	27.8	chromosome:NC_005303.2/AP006628.2	-	1	908	743	12/9/03	4/17/17	Complete Genome	"The University of Tokyo, Japan"	SAMD00061121	GCA_000009845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/845/GCA_000009845.1_ASM984v1	14661021	onion yellows
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.32243	59.8	-	FCHX01	29	5077	4894	1/21/16	3/27/17	Scaffold	SC	SAMEA2273943	GCA_001540525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/525/GCA_001540525.1_12082_2_76	-	2880STDY5682870
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.56399	31.7	-	FBKQ01	15	1577	1517	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683342	GCA_001489555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/555/GCA_001489555.1_H094560720	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.76531	55.4	-	FJYY01	27	4598	4401	4/5/16	3/28/17	Scaffold	SC	SAMEA2273356	GCA_900075725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/725/GCA_900075725.1_11983_6_36	-	e1454
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15445	64.2	-	FSEB01	67	5139	4996	12/14/16	3/21/17	Contig	SC	SAMEA2070789	GCA_900133965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/965/GCA_900133965.1_10250_1_73	-	413
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	4.92007	55.1	-	BEEY01	151	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089478	GCA_002333945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/945/GCA_002333945.1_ASM233394v1	-	TUM10685
Pseudomonas sp. 655	1705718	PRJNA292855	292855	Proteobacteria	Gammaproteobacteria	7.17088	59.5	-	LIUV01	61	6428	6269	9/9/15	4/11/17	Scaffold	University of Copenhagen	SAMN03992869	GCA_001280445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/445/GCA_001280445.1_ASM128044v1	-	655
Streptomyces sp. di50b	1839760	PRJEB14559	326648	Terrabacteria group	Actinobacteria	6.46868	72.2	-	FMCK01	383	6127	5242	8/12/16	8/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04883094	GCA_900091735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/735/GCA_900091735.1_IMG-taxon_2657245705_annotated_assembly	-	di50b
Streptomyces sp. DpondAA-D4	1839769	PRJEB14562	326640	Terrabacteria group	Actinobacteria	7.27311	72.1	-	FMCA01	118	6349	5952	8/12/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04883146	GCA_900091745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/745/GCA_900091745.1_IMG-taxon_2657245708_annotated_assembly	-	DpondAA-D4
Pseudomonas sp. Leaf48	1736221	PRJNA297956	297956	Proteobacteria	Gammaproteobacteria	5.68945	59.4	-	LMLH01	33	5227	5009	11/2/15	4/11/17	Scaffold	Max Planck Institute for Plant Breeding Research	SAMN04151601	GCA_001421885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/885/GCA_001421885.1_Leaf48	26633631	Leaf48
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.08453	55	-	BEEZ01	153	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089479	GCA_002333965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/965/GCA_002333965.1_ASM233396v1	-	TUM10686
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.20106	64	-	FSEC01	15	5247	5122	12/14/16	3/21/17	Contig	SC	SAMEA2070788	GCA_900133975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/975/GCA_900133975.1_10250_1_70	-	410
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.01168	54.8	-	FJZB01	44	4961	4723	4/5/16	3/28/17	Scaffold	SC	SAMEA2273360	GCA_900075735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/735/GCA_900075735.1_11983_6_40	-	e1481
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.58627	31.8	-	FBKA01	19	1590	1529	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683323	GCA_001489575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/575/GCA_001489575.1_H075140555	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.21617	59.8	-	FCKW01	16	5014	4850	1/21/16	3/27/17	Scaffold	SC	SAMEA2274041	GCA_001540545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/545/GCA_001540545.1_12082_3_66	-	2880STDY5682969
Arcobacter sp. LPB0137	1850254	PRJNA355602	355602	Proteobacteria	delta/epsilon subdivisions	2.86643	27.7	chromosome:NZ_CP019070.1/CP019070.1	-	1	2816	2698	1/18/17	4/16/17	Complete Genome	Korea University	SAMN06075356	GCA_001956695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/956/695/GCA_001956695.1_ASM195669v1	-	LPB0137
Enterococcus faecium	1352	PRJNA264849	264849	Terrabacteria group	Firmicutes	2.82023	37.8	-	JSET01	142	2912	2745	11/5/14	3/24/17	Contig	NCTR/US FDA	SAMN03143391	GCA_000772505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/505/GCA_000772505.1_ASM77250v1	26272564	VRE3
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.10638	52.4	-	MBCS01	185	2447	2140	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853025	GCA_001859865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/865/GCA_001859865.1_ASM185986v1	-	USO_SI12-046
Enterococcus faecalis EnGen0400	1391470	PRJNA217003	217003	Terrabacteria group	Firmicutes	2.92181	37.7	-	JAHF01	13	2952	2790	1/13/14	3/24/17	Scaffold	Broad Institute	SAMN02333876	GCA_000519425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/425/GCA_000519425.1_Ente_faec_B284_V1	-	EnGen0400
Klebsiella pneumoniae CHS 62	1438768	PRJNA234231	234231	Proteobacteria	Gammaproteobacteria	5.87901	56.9	-	JMYH01	10	5982	5694	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581364	GCA_000694155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/155/GCA_000694155.1_Kleb_pneu_CHS_62_V1	-	CHS 62
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.09409	45.3	-	JNUA02	37	4890	4698	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741355	GCA_000707525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/525/GCA_000707525.2_ASM70752v2	"2,510,376,428,330,880"	CFSAN001618
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.21571	28.3	-	MOPH01	84	3887	3740	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710845	GCA_002301095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/095/GCA_002301095.1_ASM230109v1	-	5491-N/ST10
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.05816	47.5	-	LGOC01	129	3859	3729	7/24/15	3/26/17	Contig	University of maryland	SAMN03839362	GCA_001186825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/825/GCA_001186825.1_ASM118682v1	-	NHCM-01
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.34199	68	-	LWYL01	260	7680	7005	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208653	GCA_001977345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/345/GCA_001977345.1_ASM197734v1	-	MSHR0644
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.42239	51	-	CXCZ01	331	4678	4224	7/16/15	2/24/17	Scaffold	SC	SAMEA954704	GCA_001249915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/915/GCA_001249915.1_5236_6_8	-	Sh1166_440936
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.33085	38.2	-	FJAB01	36	3062	2927	2/20/16	3/27/17	Contig	SC	SAMEA2059861	GCA_900060195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/195/GCA_900060195.1_10771_1_26	-	2531STDY5467307
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.17587	41.1	-	CZGD01	117	2243	2076	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595240	GCA_900007975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/975/GCA_900007975.1_assembly_GD-0070	-	-
Streptococcus agalactiae SGBS022	1244101	PRJNA177835	177835	Terrabacteria group	Firmicutes	2.14643	35.3	-	AUWD01	26	2212	2104	8/26/13	3/15/17	Contig	MD Anderson Cancer Center	SAMN01774144	GCA_000454965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/965/GCA_000454965.1_Final_Assembly	-	SGBS022
Acinetobacter baumannii TG22194	1315162	PRJNA196281	196281	Proteobacteria	Gammaproteobacteria	4.13536	39	-	ASFR01	61	4011	3802	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055523	GCA_000453085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/085/GCA_000453085.1_ASM45308v1	-	TG22194
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.35883	66.4	-	JTOH01	73	6041	5869	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105710	GCA_000792925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/925/GCA_000792925.1_AZPAE15013	25367914	AZPAE15013
Streptococcus pyogenes	1314	PRJEB14938	368662	Terrabacteria group	Firmicutes	1.86068	38.5	-	FNMQ01	18	1920	1808	1/25/17	3/28/17	Contig	CHUV-UNIL	SAMEA4520963	GCA_900106495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/495/GCA_900106495.1_SP_ISR2	-	ISR2
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05545	52.1	-	CMYQ01	164	2315	2060	3/23/15	3/17/17	Contig	SC	SAMEA1031639	GCA_001152665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/665/GCA_001152665.1_6714_2_6	-	NM1837
Helicobacter pylori A45	1231719	PRJNA175046	175046	Proteobacteria	delta/epsilon subdivisions	1.64393	38.7	-	AMYU01	33	1621	1462	1/25/13	3/23/17	Contig	Scientific Research Institute of Physical-Chemical Medicine 	SAMN02470830	GCA_000333835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/835/GCA_000333835.1_ASM33383v1	-	A45
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.09741	39.6	-	CLZT01	67	2302	2074	3/21/15	3/4/17	Contig	SC	SAMEA1028647	GCA_001085345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/345/GCA_001085345.1_6983_8_90	-	SMRU2394
Methanosphaera stadtmanae DSM 3091	339860	PRJNA15579	15579	Euryarchaeota	Methanobacteria	1.7674	27.6	chromosome:NC_007681.1/CP000102.1	-	1	1591	1518	1/5/06	4/17/17	Complete Genome	University of Goettingen	SAMN02604180	GCA_000012545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/545/GCA_000012545.1_ASM1254v1	16385054	DSM 3091
Mycobacterium tuberculosis MD15584	1447524	PRJNA234652	234652	Terrabacteria group	Actinobacteria	4.42627	65.6	-	JLDI01	93	4351	4141	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584675	GCA_000651255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/255/GCA_000651255.1_Myco_tube_MD15584_V1	-	MD15584
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.52477	31.8	-	JVNN01	151	2470	2354	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197463	GCA_001072005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/005/GCA_001072005.1_ASM107200v1	26230489	270_SEPI
Bacillus cereus	1396	PRJNA293515	293515	Terrabacteria group	Firmicutes	5.66263	35.1	-	LJKI01	78	5990	5759	4/13/16	3/28/17	Scaffold	TIFN	SAMN04046540	GCA_001619395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/395/GCA_001619395.1_ASM161939v1	27257202	B4120
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.10797	37.8	-	JOYO01	29	3206	3099	7/15/14	2/26/17	Contig	Cornell University	SAMN02741523	GCA_000727495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/495/GCA_000727495.1_ASM72749v1	-	FSL R8-6180
Yersinia pestis subsp. microtus bv. Ulegeica	385969	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.52054	47.5	-	LIZG01	341	4195	3711	9/21/15	12/17/15	Scaffold	SRCAMB	SAMN03893400	GCA_001294895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/895/GCA_001294895.1_ASM129489v1	26634751	SCPM-O-B-6906
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.74238	30.2	-	CUQC01	24	1824	1646	3/31/15	4/10/17	Contig	SC	SAMEA1010331	GCA_001227485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/485/GCA_001227485.1_7092_1_37	-	OXC6484
Blattabacterium sp. (Mastotermes darwiniensis) str. MADAR	1074889	PRJNA70095	70095	FCB group	Bacteroidetes/Chlorobi group	0.590336	27.523	chromosome:NC_016146.1/CP003000.1; plasmid pMADAR_001:NC_016150.1/CP003095.1	-	2	593	540	10/31/11	4/17/17	Complete Genome	Yale University	SAMN02604332	GCA_000233435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/435/GCA_000233435.1_ASM23343v1	22020505	MADAR
Staphylococcus aureus M0695	1213725	PRJNA171269	171269	Terrabacteria group	Firmicutes	2.87223	32.9	-	AOAD01	19	3007	2811	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN01047808	GCA_000361885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/885/GCA_000361885.1_Stap_aure_M0695_V1	-	M0695
Staphylococcus aureus M0719	1158694	PRJNA88687	88687	Terrabacteria group	Firmicutes	2.97503	33.1	-	AIXN01	10	3113	2939	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809034	GCA_000361905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/905/GCA_000361905.1_Stap_aure_M0719_V1	-	M0719
Borrelia recurrentis A1	412418	PRJNA18233	18233	Spirochaetes	Spirochaetia	1.24216	27.5118	chromosome:NC_011244.1/CP000993.1; plasmid pl124:NC_011246.1/CP000994.1; plasmid pl23:NC_011252.1/CP000995.1; plasmid pl33:NC_011253.1/CP000996.1; plasmid pl35:NC_011255.1/CP000997.1; plasmid pl37:NC_011258.1/CP000998.1; plasmid pl53:NC_011260.1/CP000999.1; plasmid pl6:NC_011263.1/CP001000.1	-	8	1195	1029	9/15/08	4/17/17	Complete Genome	Marseille-Nice Genopole	SAMN02603586	GCA_000019705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/705/GCA_000019705.1_ASM1970v1	-	A1
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64327	30.5	-	CUOG01	17	1717	1615	3/31/15	3/18/17	Contig	SC	SAMEA1010352	GCA_001227525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/525/GCA_001227525.1_7065_7_8	-	OXC6354
Yersinia pestis subsp. microtus bv. Caucasica	385966	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.55966	47.6	-	LIZC01	202	4242	3893	9/21/15	12/17/15	Scaffold	SRCAMB	SAMN03861503	GCA_001294905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/905/GCA_001294905.1_ASM129490v1	26634751	SCPM-O-B-6300
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.05524	37.8	-	JOZH01	29	3120	3016	7/15/14	2/26/17	Contig	Cornell University	SAMN02741542	GCA_000727515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/515/GCA_000727515.1_ASM72751v1	-	FSL R8-6480
Bacillus cereus	1396	PRJNA293515	293515	Terrabacteria group	Firmicutes	5.59146	34.9	-	LJKJ01	87	5888	5653	4/13/16	3/28/17	Scaffold	TIFN	SAMN04046541	GCA_001619405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/405/GCA_001619405.1_ASM161940v1	27257202	B4155
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.52573	31.8	-	JVNB01	139	2462	2359	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197475	GCA_001072055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/055/GCA_001072055.1_ASM107205v1	26230489	281_SEPI
Mycobacterium tuberculosis MD15758	1447525	PRJNA234653	234653	Terrabacteria group	Actinobacteria	4.39084	65.6	-	JLDH01	94	4336	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584676	GCA_000651275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/275/GCA_000651275.1_Myco_tube_MD15758_V1	-	MD15758
Candidatus Blochmannia vafer str. BVAF	859654	PRJNA50045	50045	Proteobacteria	Gammaproteobacteria	0.722585	27.5	chromosome:NC_014909.2/CP002189.2	-	1	630	585	1/13/11	4/17/17	Complete Genome	"Josephine Bay Paul Center for Comparative Molecular Biology and Evolution, Marine Biological Laboratory"	SAMN02603466	GCA_000185985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/185/985/GCA_000185985.2_ASM18598v2	21126349	BVAF
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.14908	39.6	-	CMES01	104	2383	2146	3/21/15	3/4/17	Contig	SC	SAMEA1028906	GCA_001085385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/385/GCA_001085385.1_7011_5_21	-	SMRU2805
Helicobacter pylori Hp H-1	992058	PRJNA64143	64143	Proteobacteria	delta/epsilon subdivisions	1.68293	39	-	AOTX01	54	1658	1510	3/27/13	3/23/17	Contig	Institute for Genome Sciences	SAMN01178406	GCA_000349405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/405/GCA_000349405.1_ASM34940v1	-	Hp H-1
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.03273	52.1	-	CMZY01	216	2273	2030	3/22/15	3/17/17	Contig	SC	SAMEA1031743	GCA_001154845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/845/GCA_001154845.1_6714_4_8	-	NM2606
Streptococcus pyogenes	1314	PRJEB11503	368825	Terrabacteria group	Firmicutes	1.76312	38.6	-	FUVE01	113	1797	1701	2/17/17	2/23/17	Contig	IFH_MS	SAMEA4470459	GCA_900108785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/785/GCA_900108785.1_PEI-B-P-20	-	-
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.40044	66.5	-	JTOG01	109	6104	5883	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105711	GCA_000792945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/945/GCA_000792945.1_AZPAE15014	25367914	AZPAE15014
Acinetobacter baumannii TG22196	1315163	PRJNA196282	196282	Proteobacteria	Gammaproteobacteria	3.99864	39	-	ASFS01	43	3846	3698	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055524	GCA_000453105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/105/GCA_000453105.1_ASM45310v1	-	TG22196
Streptococcus agalactiae SGBS026	1244103	PRJNA177837	177837	Terrabacteria group	Firmicutes	2.07749	35.3	-	AUWF01	25	2139	2023	8/26/13	3/15/17	Contig	MD Anderson Cancer Center	SAMN01774146	GCA_000454985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/985/GCA_000454985.1_Final_Assembly	-	SGBS026
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.21853	41.1	-	CZGE01	64	2272	2096	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595243	GCA_900007985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/985/GCA_900007985.1_assembly_GD-0076	-	-
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.60634	38.2	-	FJAG01	42	3334	3174	2/20/16	3/27/17	Contig	SC	SAMEA2059854	GCA_900060205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/205/GCA_900060205.1_10771_1_14	-	2531STDY5467295
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.72472	50.7	-	CWUI01	453	5563	4361	7/16/15	2/24/17	Scaffold	SC	SAMEA3345032	GCA_001249935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/935/GCA_001249935.1_H14140035801	-	35801ss_1
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.25293	68	-	LWYO01	246	7544	6882	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208656	GCA_001977365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/365/GCA_001977365.1_ASM197736v1	-	MSHR0503
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.03294	47.5	-	LGOB01	87	3851	3675	7/24/15	3/26/17	Contig	University of maryland	SAMN03839361	GCA_001186835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/835/GCA_001186835.1_ASM118683v1	-	NHCC-083
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.12337	28.4	-	MOPI01	98	3875	3730	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710846	GCA_002301105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/105/GCA_002301105.1_ASM230110v1	-	5492-M/ST15
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.09339	45.3	-	JNUB02	38	4908	4699	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741356	GCA_000707545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/545/GCA_000707545.2_ASM70754v2	"2,510,376,428,330,880"	CFSAN001619
Klebsiella pneumoniae CHS 63	1438769	PRJNA234232	234232	Proteobacteria	Gammaproteobacteria	5.68822	57.1	-	JMYI01	4	5744	5498	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581365	GCA_000694175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/175/GCA_000694175.1_Kleb_pneu_CHS_63_V1	-	CHS 63
Enterococcus faecalis EnGen0401	1391471	PRJNA217004	217004	Terrabacteria group	Firmicutes	3.07048	37.4	-	JAHG01	17	3166	2988	1/13/14	3/24/17	Scaffold	Broad Institute	SAMN02333877	GCA_000519445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/445/GCA_000519445.1_Ente_faec_B287_V1	-	EnGen0401
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.10941	52.4	-	MBCT01	183	2468	2159	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853027	GCA_001859875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/875/GCA_001859875.1_ASM185987v1	-	USO_UK121470
Enterococcus faecium	1352	PRJNA260816	260816	Terrabacteria group	Firmicutes	2.70994	38.3	-	JRGY01	80	2740	2447	11/25/14	4/10/17	Contig	IEM RAMS	SAMN03031339	GCA_000787065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/065/GCA_000787065.1_ASM78706v1	-	L-X
Ehrlichia ruminantium str. Gardel	302409	PRJNA13356	13356	Proteobacteria	Alphaproteobacteria	1.49992	27.5	chromosome:NC_006831.1/CR925677.1	-	1	986	925	2/1/05	3/30/17	Complete Genome	"CIRAD, France"	SAMEA3138254	GCA_000050405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/050/405/GCA_000050405.1_ASM5040v1	16547041	Gardel
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.0528	60	-	FCLX01	16	4819	4658	1/21/16	3/27/17	Scaffold	SC	SAMEA2274074	GCA_001540565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/565/GCA_001540565.1_12082_3_94	-	2880STDY5683002
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.63922	31.4	-	FBMU01	23	1691	1598	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683399	GCA_001489595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/595/GCA_001489595.1_CCN289	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.92791	54.9	-	FJYZ01	122	4879	4558	4/5/16	3/28/17	Scaffold	SC	SAMEA2273357	GCA_900075745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/745/GCA_900075745.1_11983_6_37	-	e1464
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.14047	64.1	-	FSED01	29	5124	4984	12/14/16	3/21/17	Contig	SC	SAMEA2068974	GCA_900133985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/985/GCA_900133985.1_10250_1_74	-	414
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.06559	55	-	BEFA01	223	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089480	GCA_002333985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/985/GCA_002333985.1_ASM233398v1	-	TUM10687
Pseudomonas sp. ICMP 3272	716914	PRJNA296739	296739	Proteobacteria	Gammaproteobacteria	5.93125	58.5	-	LKEK01	129	5442	5135	12/15/15	4/16/17	Scaffold	New Zealand Institute for Plant & Food research	SAMN04102824	GCA_001466905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/905/GCA_001466905.1_ASM146690v1	27056212	ICMP 3272
Streptomyces sp. TverLS-915	1839763	PRJEB14571	326632	Terrabacteria group	Actinobacteria	7.04837	73.4	-	FMCE01	377	6308	5792	8/12/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04883130	GCA_900091755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/755/GCA_900091755.1_IMG-taxon_2657245718_annotated_assembly	-	TverLS-915
Streptomyces sp. PalvLS-984	1839782	PRJEB14568	326634	Terrabacteria group	Actinobacteria	7.09816	72.1	-	FMCD01	301	6322	5713	8/12/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04883180	GCA_900091765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/765/GCA_900091765.1_IMG-taxon_2657245714_annotated_assembly	-	PalvLS-984
Pseudomonas sp. EpS/L25	1749078	PRJNA299877	299877	Proteobacteria	Gammaproteobacteria	5.43523	65.5	-	LNUP01	18	4961	4747	1/12/16	4/11/17	Scaffold	University of Florence	SAMN04216969	GCA_001512295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/295/GCA_001512295.1_ASM151229v1	27151804	EpSL25
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.05434	54.7	-	BEFC01	192	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089482	GCA_002334025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/025/GCA_002334025.1_ASM233402v1	-	TUM10689
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.27964	64.1	-	FVIO01	43	5258	5108	3/10/17	3/18/17	Contig	SC	SAMEA2068976	GCA_900134005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/005/GCA_900134005.1_10396_8_11	-	420
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.9304	54.7	-	FJZA01	65	4840	4586	4/5/16	3/28/17	Scaffold	SC	SAMEA2273130	GCA_900075755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/755/GCA_900075755.1_12045_4_10	-	e147
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66023	31.4	-	FBBK01	25	1720	1625	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683096	GCA_001489615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/615/GCA_001489615.1_EC3940	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.2368	60	-	FCLO01	21	4961	4803	1/21/16	3/27/17	Scaffold	SC	SAMEA2274063	GCA_001540585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/585/GCA_001540585.1_12082_3_85	-	2880STDY5682991
Ehrlichia ruminantium str. Welgevonden	254945	PRJNA13355	13355	Proteobacteria	Alphaproteobacteria	1.51298	27.5	chromosome:NC_006832.1/CR925678.1	-	1	994	930	2/1/05	3/30/17	Complete Genome	"CIRAD, France"	SAMEA3138255	GCA_000050425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/050/425/GCA_000050425.1_ASM5042v1	16547041	Welgevonden
Enterococcus faecium MRSN 3418	1409947	PRJNA223621	223621	Terrabacteria group	Firmicutes	3.04886	37.7	-	LBIM01	136	3206	2911	4/29/15	3/26/17	Contig	J. Craig Venter Institute	SAMN03486509	GCA_000981945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/945/GCA_000981945.1_ASM98194v1	-	MRSN 3418
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.1007	52.5	-	MBCU01	157	2438	2140	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853028	GCA_001859905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/905/GCA_001859905.1_ASM185990v1	-	USO_DK13-3
Enterococcus faecalis EnGen0402	1391472	PRJNA217005	217005	Terrabacteria group	Firmicutes	2.94995	37.6	-	JAHH01	4	3001	2836	1/13/14	3/24/17	Scaffold	Broad Institute	SAMN02333878	GCA_000519465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/465/GCA_000519465.1_Ente_faec_B289_V1	-	EnGen0402
Klebsiella pneumoniae CHS 64	1438770	PRJNA234233	234233	Proteobacteria	Gammaproteobacteria	5.87409	56.9	-	JMYJ01	11	5961	5675	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581366	GCA_000694195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/195/GCA_000694195.1_Kleb_pneu_CHS_64_V1	-	CHS 64
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.09428	45.3	-	JNUC02	50	4902	4694	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741357	GCA_000707565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/565/GCA_000707565.2_ASM70756v2	"2,510,376,428,330,880"	CFSAN001620
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.05157	28.4	-	MOPJ01	67	3680	3558	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710847	GCA_002301125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/125/GCA_002301125.1_ASM230112v1	-	5493-DH/ST42
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.05804	47.5	-	LGOD01	89	3883	3722	7/24/15	3/26/17	Contig	University of maryland	SAMN03839363	GCA_001186855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/855/GCA_001186855.1_ASM118685v1	-	NHCM-02
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.9943	68.3	-	LWVT01	195	7270	6717	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208583	GCA_001977375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/375/GCA_001977375.1_ASM197737v1	-	4210a
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.92791	50.4	-	CXLY01	436	5590	4735	7/16/15	2/24/17	Scaffold	SC	SAMEA2003496	GCA_001249955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/955/GCA_001249955.1_8290_5_9	-	35527695
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.51482	38.3	-	FJDE01	42	3227	3085	2/20/16	3/27/17	Contig	SC	SAMEA1967227	GCA_900060365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/365/GCA_900060365.1_10771_1_92	-	2531STDY5467373
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.03643	41.2	-	CZGA01	35	2047	1939	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595244	GCA_900007995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/995/GCA_900007995.1_assembly_GD-0077	-	-
Streptococcus agalactiae SGBS025	1244102	PRJNA177836	177836	Terrabacteria group	Firmicutes	2.06716	35.3	-	AUWE01	25	2124	2010	8/26/13	3/15/17	Contig	MD Anderson Cancer Center	SAMN01774145	GCA_000455005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/005/GCA_000455005.1_Final_Assembly	-	SGBS025
Acinetobacter baumannii TG22198	1315164	PRJNA196283	196283	Proteobacteria	Gammaproteobacteria	4.48904	38.9	-	ASFT01	28	4249	4079	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055525	GCA_000453125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/125/GCA_000453125.1_ASM45312v1	-	TG22198
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.75682	65.9	-	JTOE01	161	6543	6295	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105713	GCA_000792965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/965/GCA_000792965.1_AZPAE15016	25367914	AZPAE15016
Streptococcus pyogenes	1314	PRJNA242686	242686	Terrabacteria group	Firmicutes	1.79396	38.4	-	JHFA01	39	1808	1723	5/7/14	3/24/17	Scaffold	Universidade Catolica de Brasilia	SAMN02708609	GCA_000685485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/485/GCA_000685485.1_SP1_contigs.fa	-	Lacen1
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05437	52	-	CMXO01	149	2322	2057	3/23/15	3/21/17	Contig	SC	SAMEA1031723	GCA_001161625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/625/GCA_001161625.1_6714_1_4	-	NM1360
Helicobacter pylori UMB_G1	1200324	PRJNA168619	168619	Proteobacteria	delta/epsilon subdivisions	1.5718	39.2	-	AOTV01	5	1546	1413	3/27/13	3/23/17	Contig	IGS	SAMN01178405	GCA_000349465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/465/GCA_000349465.1_ASM34946v1	-	UMB_G1
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09699	39.6	-	CKWF01	81	2342	2110	3/21/15	3/4/17	Contig	SC	SAMEA1025761	GCA_001085405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/405/GCA_001085405.1_6823_5_11	-	SMRU1955
Ehrlichia ruminantium str. Welgevonden	254945	PRJNA9614	9614	Proteobacteria	Alphaproteobacteria	1.51635	27.5	chromosome:NC_005295.2/CR767821.1	-	1	990	936	12/10/03	3/30/17	Complete Genome	"University of Pretoria, South Africa"	SAMEA1705918	GCA_000026005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/005/GCA_000026005.1_ASM2600v1	15637156	Welgevonden
Mycobacterium tuberculosis MD15765	1447526	PRJNA234654	234654	Terrabacteria group	Actinobacteria	4.42992	65.6	-	JLDG01	109	4358	4135	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584677	GCA_000651295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/295/GCA_000651295.1_Myco_tube_MD15765_V1	-	MD15765
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.71099	31.7	-	JVNA01	75	2701	2597	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197476	GCA_001072065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/065/GCA_001072065.1_ASM107206v1	26230489	282_SEPI
Bacillus cereus	1396	PRJNA293515	293515	Terrabacteria group	Firmicutes	5.71753	35	-	LJKA01	84	6171	5772	4/13/16	3/28/17	Scaffold	TIFN	SAMN04046441	GCA_001619425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/425/GCA_001619425.1_ASM161942v1	27257202	B4082
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	2.88812	37.9	-	JOZL01	17	2899	2814	7/15/14	2/26/17	Contig	Cornell University	SAMN02741546	GCA_000727545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/545/GCA_000727545.1_ASM72754v1	-	FSL R8-6592
Yersinia pestis subsp. microtus bv. Caucasica	385966	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.55784	47.6	-	LIZB01	205	4256	3854	9/21/15	12/17/15	Scaffold	SRCAMB	SAMN03861500	GCA_001294985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/985/GCA_001294985.1_ASM129498v1	26634751	SCPM-O-B-7832
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.73437	30.3	-	CUUW01	23	1839	1718	3/31/15	3/18/17	Contig	SC	SAMEA1401184	GCA_001227605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/605/GCA_001227605.1_7213_3_67	-	OXC6611
Clostridium botulinum B str. Eklund 17B (NRP)	935198	PRJNA28857	28857	Terrabacteria group	Firmicutes	3.84797	27.469	chromosome:NC_010674.1/CP001056.1; plasmid pCLL:NC_010680.1/CP001057.1	-	2	3541	3376	5/7/08	4/6/17	Complete Genome	Los Alamos National Laboratory	SAMN02603538	GCA_000020165.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/165/GCA_000020165.1_ASM2016v1	-	Eklund 17B
Staphylococcus aureus M0769	1158695	PRJNA88689	88689	Terrabacteria group	Firmicutes	2.86721	32.9	-	AIXO01	13	3029	2862	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809035	GCA_000361925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/925/GCA_000361925.1_Stap_aure_M0769_V1	-	M0769
Staphylococcus aureus M0770	1158696	PRJNA88691	88691	Terrabacteria group	Firmicutes	2.91847	32.9	-	AIXP01	12	3079	2903	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809036	GCA_000361945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/945/GCA_000361945.1_Stap_aure_M0770_V1	-	M0770
Clostridium botulinum 202F	1415774	PRJNA225787	225787	Terrabacteria group	Firmicutes	3.9146	27.4103	chromosome:NZ_CP006903.1/CP006903.1; plasmid pCBI:NZ_CP006904.1/CP006904.1	-	2	3667	3455	12/4/14	3/25/17	Complete Genome	Los Alamos National Laboratory	SAMN03222822	GCA_000789355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/355/GCA_000789355.1_ASM78935v1	25489752	202F
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69232	30.5	-	CUJJ01	28	1804	1703	3/31/15	3/18/17	Contig	SC	SAMEA1010659	GCA_001227665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/665/GCA_001227665.1_7038_3_51	-	OXC6301
Yersinia pestis subsp. microtus bv. Caucasica	385966	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.55956	47.6	-	LIZF01	183	4238	3863	9/21/15	12/17/15	Scaffold	SRCAMB	SAMN03861513	GCA_001295055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/055/GCA_001295055.1_ASM129505v1	26634751	SCPM-O-B-6540
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.10533	37.8	-	JPAC01	37	3187	3090	7/15/14	2/26/17	Contig	Cornell University	SAMN02741563	GCA_000727565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/565/GCA_000727565.1_ASM72756v1	-	FSL R8-6765
Bacillus cereus	1396	PRJNA293515	293515	Terrabacteria group	Firmicutes	5.338	35	-	LJKC01	59	5686	5415	4/13/16	3/28/17	Scaffold	TIFN	SAMN04046443	GCA_001619445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/445/GCA_001619445.1_ASM161944v1	27257202	B4084
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.77161	31.9	-	JVML01	119	2794	2685	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197491	GCA_001072135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/135/GCA_001072135.1_ASM107213v1	26230489	296_SEPI
Mycobacterium tuberculosis MD15762	1447527	PRJNA234656	234656	Terrabacteria group	Actinobacteria	4.42505	65.6	-	JLDF01	96	4352	4140	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02584678	GCA_000651315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/315/GCA_000651315.1_Myco_tube_MD15762_V1	-	MD15762
Mycoplasma hominis	2098	PRJNA285062	285062	Terrabacteria group	Tenericutes	0.695214	27.4	chromosome:NZ_CP011538.1/CP011538.1	-	1	619	558	6/2/15	4/3/17	Complete Genome	University of Missouri - Columbia	SAMN03736930	GCA_001017595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/595/GCA_001017595.1_ASM101759v1	26159538	Sprott
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06425	39.7	-	COBF02	183	2248	2040	3/23/15	3/11/17	Contig	SC	SAMEA1463272	GCA_001085445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/445/GCA_001085445.2_7622_2_38	-	BR1111
Helicobacter pylori CCHI 33	1200325	PRJNA168620	168620	Proteobacteria	delta/epsilon subdivisions	1.65933	39.2	-	AOTU01	11	1638	1477	3/27/13	3/23/17	Contig	IGS	SAMN01178404	GCA_000349485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/485/GCA_000349485.1_ASM34948v1	-	CCHI 33
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.06402	52	-	CMWW01	157	2328	2051	3/23/15	3/21/17	Contig	SC	SAMEA1031660	GCA_001162925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/925/GCA_001162925.1_6714_1_15	-	NM1550
Streptococcus pyogenes	1314	PRJNA242686	242686	Terrabacteria group	Firmicutes	1.76282	38.4	-	JHTP01	100	1794	1659	5/7/14	3/24/17	Scaffold	Universidade Catolica de Brasilia	SAMN02708610	GCA_000685505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/505/GCA_000685505.1_SP2_contigs.fa	-	Lacen2
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.80423	66.1	-	JTOF01	113	6508	6285	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105712	GCA_000792975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/975/GCA_000792975.1_AZPAE15015	25367914	AZPAE15015
Acinetobacter baumannii TG22202	1315165	PRJNA196284	196284	Proteobacteria	Gammaproteobacteria	4.20951	39	-	ASFU01	65	4070	3853	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055494	GCA_000453145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/145/GCA_000453145.1_ASM45314v1	-	TG22202
Streptococcus agalactiae SGBS030	1244106	PRJNA177840	177840	Terrabacteria group	Firmicutes	2.08002	35.3	-	AUWI01	24	2143	2019	8/26/13	3/15/17	Contig	MD Anderson Cancer Center	SAMN01774149	GCA_000455025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/025/GCA_000455025.1_Final_Assembly	-	SGBS030
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.10172	41.1	-	CZGJ01	45	2125	1970	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595254	GCA_900008015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/015/GCA_900008015.1_assembly_GD-0098	-	-
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.26647	38.1	-	FJDD01	34	2963	2826	2/20/16	3/27/17	Contig	SC	SAMEA2064215	GCA_900060375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/375/GCA_900060375.1_10771_3_17	-	2531STDY5467394
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.51093	50.6	-	CXBY01	430	4820	4271	7/16/15	2/24/17	Scaffold	SC	SAMEA954859	GCA_001249975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/975/GCA_001249975.1_5236_2_7	-	ShIB2000_440759
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.13703	68.1	-	LWVV01	199	7403	6827	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208585	GCA_001977385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/385/GCA_001977385.1_ASM197738v1	-	4228b
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.06529	47.4	-	LGOG01	152	3871	3740	7/24/15	3/26/17	Contig	University of maryland	SAMN03839366	GCA_001186885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/885/GCA_001186885.1_ASM118688v1	-	NHCM-06
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.07715	28.5	-	MOPK01	65	3756	3608	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710848	GCA_002301145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/145/GCA_002301145.1_ASM230114v1	-	5494-Y/ST110
Vibrio parahaemolyticus O4:K12 str. K1203	1173954	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.26442	45.1	-	JNUD02	74	5101	4889	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN01816333	GCA_000707585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/585/GCA_000707585.2_ASM70758v2	"2,510,376,428,330,880"	K1203
Klebsiella pneumoniae CHS 65	1438771	PRJNA234234	234234	Proteobacteria	Gammaproteobacteria	5.75154	56.8	-	JMYK01	12	5856	5565	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581367	GCA_000694215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/215/GCA_000694215.1_Kleb_pneu_CHS_65_V1	-	CHS 65
Enterococcus faecalis EnGen0403	1391473	PRJNA217006	217006	Terrabacteria group	Firmicutes	3.13741	37.3	-	JAHI01	6	3287	3109	1/13/14	3/24/17	Scaffold	Broad Institute	SAMN02333879	GCA_000519485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/485/GCA_000519485.1_Ente_faec_B291_V1	-	EnGen0403
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.11491	52.4	-	MBCV01	189	2445	2136	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853029	GCA_001859915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/915/GCA_001859915.1_ASM185991v1	-	USO_DK13-5
Enterococcus faecium MRSN 11639	1409946	PRJNA223620	223620	Terrabacteria group	Firmicutes	2.95146	37.6	-	LBIN01	142	3108	2816	4/29/15	3/26/17	Contig	J. Craig Venter Institute	SAMN03486508	GCA_000982025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/025/GCA_000982025.1_ASM98202v1	-	MRSN 11639
Blochmannia endosymbiont of Camponotus (Colobopsis) obliquus	1505597	PRJNA249064	249064	Proteobacteria	Gammaproteobacteria	0.77394	27.4	chromosome:NZ_CP010049.1/CP010049.1	-	1	636	585	4/20/15	4/10/17	Complete Genome	Duke University	SAMN02808399	GCA_000973545.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/545/GCA_000973545.1_ASM97354v1	25861561	757
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.12572	60	-	FCIF01	18	4890	4721	1/21/16	3/27/17	Scaffold	SC	SAMEA2273952	GCA_001540605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/605/GCA_001540605.1_12082_2_83	-	2880STDY5682879
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.70043	31.3	-	FBKG01	27	1782	1682	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683330	GCA_001489635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/635/GCA_001489635.1_p474A	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.01339	54.8	-	FJZC01	46	4967	4723	4/5/16	3/28/17	Scaffold	SC	SAMEA2273362	GCA_900075765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/765/GCA_900075765.1_11983_6_42	-	e1486
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.33921	64.1	-	FVIS01	30	5449	5281	3/10/17	3/18/17	Contig	SC	SAMEA2070786	GCA_900134015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/015/GCA_900134015.1_10396_8_8	-	404
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	4.9059	55	-	BEFD01	131	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089483	GCA_002334045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/045/GCA_002334045.1_ASM233404v1	-	TUM10690
Pseudomonas sp. BMS12	1796033	PRJNA311673	311673	Proteobacteria	Gammaproteobacteria	4.51383	64	-	LSOF01	46	4223	4083	3/16/16	4/12/17	Scaffold	"KIIT School of Biotechnology, KIIT University"	SAMN04487208	GCA_001592875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/875/GCA_001592875.1_ASM159287v1	27365340	BMS12
Streptomyces sp. ScaeMP-e83	1758151	PRJEB14564	326638	Terrabacteria group	Actinobacteria	7.83397	71.5	-	FMCJ01	99	7012	6597	8/12/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04883097	GCA_900091775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/775/GCA_900091775.1_IMG-taxon_2657245710_annotated_assembly	-	ScaeMP-e83
Streptomyces sp. BvitLS-983	1838282	PRJEB14570	326631	Terrabacteria group	Actinobacteria	7.28273	73.2	-	FMCF01	352	6608	5880	8/12/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04876000	GCA_900091785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/785/GCA_900091785.1_IMG-taxon_2657245717_annotated_assembly	-	BvitLS-983
Pseudomonas sp. BIOMIG1N	1763882	PRJNA304216	304216	Proteobacteria	Gammaproteobacteria	7.4633	62.2	-	MCRV01	286	7035	6670	8/17/16	4/13/17	Scaffold	Bogazici University	SAMN04296811	GCA_001705835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/835/GCA_001705835.1_ASM170583v1	26992451	BIOMIG1N
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	4.92692	55	-	BEFE01	83	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089484	GCA_002334065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/065/GCA_002334065.1_ASM233406v1	-	TUM10691
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.95796	64.2	-	FVIN01	6	4973	4860	3/10/17	3/18/17	Contig	SC	SAMEA2070790	GCA_900134025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/025/GCA_900134025.1_10250_1_76	-	416
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.79158	55.5	-	FJZD01	36	4694	4479	4/5/16	3/28/17	Scaffold	SC	SAMEA2273363	GCA_900075775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/775/GCA_900075775.1_11983_6_44	-	e1487
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.77685	31.2	-	FBDY01	40	1875	1767	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683164	GCA_001489655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/655/GCA_001489655.1_SS_2349	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.20508	60	-	FCII01	23	4915	4756	1/21/16	3/27/17	Scaffold	SC	SAMEA2273958	GCA_001540625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/625/GCA_001540625.1_12082_2_89	-	2880STDY5682885
Clostridium botulinum	1491	PRJNA272603	272603	Terrabacteria group	Firmicutes	3.6119	27.4	chromosome:NZ_CP010520.1/CP010520.1	-	1	3237	3072	1/23/15	3/25/17	Complete Genome	KULeuven	SAMN03284354	GCA_000827935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/827/935/GCA_000827935.1_ASM82793v1	25767228	NCTC 8266
Enterococcus faecium	1352	PRJNA278440	278440	Terrabacteria group	Firmicutes	3.14205	37.6	-	LBCV01	351	3287	2902	5/8/15	4/21/17	Contig	University of Sao Paulo	SAMN03433963	GCA_001005615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/615/GCA_001005615.1_ASM100561v1	-	VRE1558
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.06058	52.6	-	MBCW01	117	2389	2064	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853030	GCA_001859945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/945/GCA_001859945.1_ASM185994v1	-	USO_GR13-015
Enterococcus faecalis EnGen0404	1391474	PRJNA217007	217007	Terrabacteria group	Firmicutes	3.1508	37.3	-	JAHJ01	8	3307	3116	1/13/14	3/24/17	Scaffold	Broad Institute	SAMN02333880	GCA_000519505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/505/GCA_000519505.1_Ente_faec_B292_V1	-	EnGen0404
Klebsiella pneumoniae CHS 66	1438772	PRJNA234235	234235	Proteobacteria	Gammaproteobacteria	5.42995	57.3	-	JMYL01	10	5402	5165	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581368	GCA_000694235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/235/GCA_000694235.1_Kleb_pneu_CHS_66_V1	-	CHS 66
Vibrio parahaemolyticus 98-513-F52	1173957	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.08523	45.2	-	JNUE02	71	4912	4676	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN01816336	GCA_000707605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/605/GCA_000707605.2_ASM70760v2	"2,510,376,428,330,880"	98-513-F52
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.25573	28.7	-	MOPL01	248	3917	3724	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710849	GCA_002301165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/165/GCA_002301165.1_ASM230116v1	-	5495-AF/ST41
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.05191	47.5	-	LGOF01	87	3863	3715	7/24/15	3/26/17	Contig	University of maryland	SAMN03839365	GCA_001186905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/905/GCA_001186905.1_ASM118690v1	-	NHCM-04
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.19222	68.2	-	LWVX01	398	7544	6795	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208587	GCA_001977425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/425/GCA_001977425.1_ASM197742v1	-	RF4-BP80
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.64634	50.7	-	CWZI01	392	5159	4456	7/16/15	2/24/17	Scaffold	SC	SAMEA2445682	GCA_001250015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/015/GCA_001250015.1_12971_8_6	-	H081460380
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.46434	38.3	-	FJDT01	39	3181	3063	2/20/16	3/27/17	Contig	SC	SAMEA2065580	GCA_900060385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/385/GCA_900060385.1_10771_3_27	-	2531STDY5467404
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.14848	41.2	-	CZGN01	72	2186	2030	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595255	GCA_900008025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/025/GCA_900008025.1_assembly_GD-0100	-	-
Streptococcus agalactiae SGBS007	1244094	PRJNA177828	177828	Terrabacteria group	Firmicutes	2.06002	35.3	-	AUVW01	18	2118	2009	8/26/13	3/15/17	Contig	MD Anderson Cancer Center	SAMN01774137	GCA_000455045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/045/GCA_000455045.1_Final_Assembly	-	SGBS007
Acinetobacter baumannii TG22204	1315166	PRJNA196285	196285	Proteobacteria	Gammaproteobacteria	3.84367	39.1	-	ASFV01	41	3657	3471	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055526	GCA_000453165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/165/GCA_000453165.1_ASM45316v1	-	TG22204
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.5946	66.1	-	JTOD01	58	6248	6048	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105714	GCA_000793005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/005/GCA_000793005.1_AZPAE15017	25367914	AZPAE15017
Streptococcus pyogenes	1314	PRJNA242686	242686	Terrabacteria group	Firmicutes	1.81542	38.4	-	JHTN01	98	1868	1745	5/7/14	3/24/17	Scaffold	Universidade Catolica de Brasilia	SAMN02708613	GCA_000685525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/525/GCA_000685525.1_SP5_contigs	-	Lacen5
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.06508	52	-	CMXP01	152	2319	2054	3/23/15	3/21/17	Contig	SC	SAMEA1031709	GCA_001163225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/225/GCA_001163225.1_6714_1_6	-	NM1362
Helicobacter pylori CPY1662	992015	PRJNA64057	64057	Proteobacteria	delta/epsilon subdivisions	1.59582	38.8	-	AOTT01	9	1586	1421	3/27/13	3/23/17	Contig	Institute for Genome Sciences	SAMN01178408	GCA_000349505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/505/GCA_000349505.1_ASM34950v1	-	CPY1662
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.18771	39.5	-	CLJQ01	64	2420	2185	3/21/15	3/4/17	Contig	SC	SAMEA1029103	GCA_001085465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/465/GCA_001085465.1_6925_8_18	-	SMRU2538
Clostridium botulinum	1491	PRJNA272602	272602	Terrabacteria group	Firmicutes	3.6119	27.4	chromosome:NZ_CP010521.1/CP010521.1	-	1	3237	3072	1/23/15	3/25/17	Complete Genome	KULeuven	SAMN03284339	GCA_000827955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/827/955/GCA_000827955.1_ASM82795v1	25767228	NCTC 8550
Mycobacterium tuberculosis TKK_03_0012	1448390	PRJNA235395	235395	Terrabacteria group	Actinobacteria	4.4163	65.5	-	JKAF01	6	4295	4108	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585885	GCA_000651335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/335/GCA_000651335.1_Myco_tube_TKK_03_0012_V1	-	TKK_03_0012
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.48446	32	-	JVMA01	137	2416	2339	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197502	GCA_001072235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/235/GCA_001072235.1_ASM107223v1	26230489	312_SEPI
Bacillus cereus	1396	PRJNA293515	293515	Terrabacteria group	Firmicutes	5.38241	35.2	-	LJKD01	84	5783	5520	4/13/16	3/28/17	Scaffold	TIFN	SAMN04046445	GCA_001619465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/465/GCA_001619465.1_ASM161946v1	27257202	B4085
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09517	37.9	-	JOZT01	23	3149	3044	7/15/14	2/26/17	Contig	Cornell University	SAMN02741554	GCA_000727585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/585/GCA_000727585.1_ASM72758v1	-	FSL R8-6661
Yersinia pestis subsp. microtus bv. Caucasica	385966	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	4.55551	47.6	-	LIYZ01	231	4240	3864	9/21/15	12/17/15	Scaffold	SRCAMB	SAMN03861484	GCA_001295065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/065/GCA_001295065.1_ASM129506v1	26634751	SCPM-O-B-6984
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69233	30.5	-	CUPE01	26	1803	1697	3/31/15	3/18/17	Contig	SC	SAMEA1010580	GCA_001227765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/765/GCA_001227765.1_7092_1_15	-	OXC6462
Candidatus Babela massiliensis	673862	PRJEB4637	222461	Proteobacteria	delta/epsilon subdivisions	1.11842	27.4	chromosome I:NC_023003.1/HG793133.1	-	1	1015	963	12/4/13	8/24/15	Complete Genome	URMITE	SAMEA3138847	GCA_000513475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/475/GCA_000513475.1_Bbla	25884386	673862
Staphylococcus aureus M0780	1158697	PRJNA88693	88693	Terrabacteria group	Firmicutes	2.86609	32.8	-	AIXQ01	7	3011	2843	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809037	GCA_000361965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/965/GCA_000361965.1_Stap_aure_M0780_V1	-	M0780
Staphylococcus aureus M0792	1213726	PRJNA171270	171270	Terrabacteria group	Firmicutes	2.94068	33	-	AOAE01	11	3072	2892	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN01047809	GCA_000361985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/361/985/GCA_000361985.1_Stap_aure_M0792_V1	-	M0792
Clostridium botulinum E3 str. Alaska E43	508767	PRJNA28855	28855	Terrabacteria group	Firmicutes	3.65964	27.4	chromosome:NC_010723.1/CP001078.1	-	1	3297	3132	5/16/08	3/22/17	Complete Genome	Los Alamos National Laboratory	SAMN02603537	GCA_000020285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/020/285/GCA_000020285.1_ASM2028v1	-	Alaska E43
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.61766	30.4	-	CUMI01	19	1705	1602	3/31/15	3/18/17	Contig	SC	SAMEA1010309	GCA_001227785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/785/GCA_001227785.1_7065_7_33	-	OXC6379
Yersinia pestis biovar Orientalis str. IP275	373665	PRJNA16376	16376	Proteobacteria	Gammaproteobacteria	5.32207	48.0718	plasmid pIP1202:CP000603.1	AAOS02	102	5160	4756	3/1/06	11/18/13	Contig	TIGR	SAMN02404398	GCA_000168235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/235/GCA_000168235.2_ASM16823v2	-	IP275
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.1234	37.9	-	JOZC01	31	3163	3060	7/15/14	2/26/17	Contig	Cornell University	SAMN02741537	GCA_000727605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/605/GCA_000727605.1_ASM72760v1	-	FSL R8-6359
Bacillus cereus	1396	PRJNA293515	293515	Terrabacteria group	Firmicutes	5.21325	35.1	-	LJKH01	61	5483	5250	4/13/16	3/28/17	Scaffold	TIFN	SAMN04046539	GCA_001619525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/525/GCA_001619525.1_ASM161952v1	27257202	B4118
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.41102	32.1	-	JVLY01	77	2369	2265	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197504	GCA_001072245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/245/GCA_001072245.1_ASM107224v1	26230489	314_SEPI
Mycobacterium tuberculosis TKK_03_0015	1448392	PRJNA235397	235397	Terrabacteria group	Actinobacteria	4.41619	65.5	-	JKAE01	8	4297	4118	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585887	GCA_000651355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/355/GCA_000651355.1_Myco_tube_TKK_03_0015_V1	-	TKK_03_0015
Candidatus Phytoplasma australiense	59748	PRJNA29469	29469	Terrabacteria group	Tenericutes	0.879959	27.4	chromosome:NC_010544.1/AM422018.1	-	1	831	699	4/1/08	4/7/17	Complete Genome	Max Planck Institute	SAMEA3138281	GCA_000069925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/069/925/GCA_000069925.1_ASM6992v1	18359806	-
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.14151	39.7	-	CMUW01	73	2333	2005	3/22/15	3/6/17	Contig	SC	SAMEA1022763	GCA_001085505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/505/GCA_001085505.1_5750_2_4	-	239
Helicobacter pylori Hp A-11	992035	PRJNA64097	64097	Proteobacteria	delta/epsilon subdivisions	1.66834	38.8	-	AOTW01	1	1654	1484	4/9/13	3/23/17	Contig	Institute for Genome Sciences	SAMN00778850	GCA_000359645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/645/GCA_000359645.1_ASM35964v1	-	Hp A-11
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05151	52.1	-	CMYD01	138	2328	2048	3/23/15	3/21/17	Contig	SC	SAMEA1031733	GCA_001163625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/625/GCA_001163625.1_6714_2_20	-	NM1963
Streptococcus pyogenes	1314	PRJNA242686	242686	Terrabacteria group	Firmicutes	1.7952	38.4	-	JHTO01	50	1818	1727	5/7/14	3/24/17	Scaffold	Universidade Catolica de Brasilia	SAMN02708612	GCA_000685545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/545/GCA_000685545.1_SP4_contigs.fa	-	Lacen4
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.934	66.1	-	JTOC01	81	6668	6461	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105715	GCA_000793025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/025/GCA_000793025.1_AZPAE15018	25367914	AZPAE15018
Acinetobacter baumannii TG22212	1315167	PRJNA196286	196286	Proteobacteria	Gammaproteobacteria	3.83622	39	-	ASFW01	46	3681	3537	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055527	GCA_000453185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/185/GCA_000453185.1_ASM45318v1	-	TG22212
Streptococcus agalactiae SGBS010	1244095	PRJNA177829	177829	Terrabacteria group	Firmicutes	2.06679	35.3	-	AUVX01	26	2130	2012	8/26/13	3/15/17	Contig	MD Anderson Cancer Center	SAMN01774138	GCA_000455065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/065/GCA_000455065.1_Final_Assembly	-	SGBS010
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.14633	41.2	-	CZGS01	80	2187	2019	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595261	GCA_900008045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/045/GCA_900008045.1_assembly_GD-0111	-	-
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.40986	38.3	-	FJGL01	24	3117	3008	2/20/16	3/27/17	Contig	SC	SAMEA2080608	GCA_900060395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/395/GCA_900060395.1_10625_2_17	-	2532STDY5467490
Shigella sonnei	624	PRJEB2075	203826	Proteobacteria	Gammaproteobacteria	4.93322	50.4	-	CXMI01	433	5607	4735	7/16/15	2/24/17	Scaffold	SC	SAMEA1560456	GCA_001250075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/075/GCA_001250075.1_8489_2_92	-	44781873
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.04822	68.2	-	LWWE01	171	7288	6742	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208594	GCA_001977435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/435/GCA_001977435.1_ASM197743v1	-	RF44-BP52
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.059	47.5	-	LGOH01	87	3885	3721	7/24/15	3/26/17	Contig	University of maryland	SAMN03839367	GCA_001186915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/915/GCA_001186915.1_ASM118691v1	-	NHCM-012
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.1	28.5	-	MOPM01	91	3780	3628	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710850	GCA_002301185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/185/GCA_002301185.1_ASM230118v1	-	5496-Y/ST110
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.10311	45.3	-	JNUF02	44	4889	4700	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741350	GCA_000707625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/625/GCA_000707625.2_ASM70762v2	"2,510,376,428,330,880"	CFSAN001613
Klebsiella pneumoniae CHS 67	1438773	PRJNA234236	234236	Proteobacteria	Gammaproteobacteria	5.81971	57	-	JMYM01	11	5930	5644	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581369	GCA_000694255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/255/GCA_000694255.1_Kleb_pneu_CHS_67_V1	-	CHS 67
Enterococcus faecalis EnGen0405	1391475	PRJNA217008	217008	Terrabacteria group	Firmicutes	3.13423	37.2	-	JAHK01	5	3270	3114	1/13/14	3/24/17	Scaffold	Broad Institute	SAMN02333881	GCA_000519525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/525/GCA_000519525.1_Ente_faec_B293_V1	-	EnGen0405
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.10559	52.5	-	MBCX01	132	2450	2143	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853031	GCA_001859965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/965/GCA_001859965.1_ASM185996v1	-	USO_LV13-034
Enterococcus faecium	1352	PRJNA283249	283249	Terrabacteria group	Firmicutes	2.69223	38.1	-	LDNE01	94	2754	2527	6/10/15	3/26/17	Contig	Seoul National University	SAMN03610565	GCA_001025245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/245/GCA_001025245.1_ASM102524v1	27070419	KACC15960
Candidatus Blochmannia floridanus	203907	PRJNA443	443	Proteobacteria	Gammaproteobacteria	0.705557	27.4	chromosome:NC_005061.1/BX248583.1	-	1	634	587	8/8/03	4/17/17	Complete Genome	Univ. Valencia	SAMEA3138247	GCA_000043285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/043/285/GCA_000043285.1_ASM4328v1	"1,288,601,916,401,340"	-
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.29662	59.9	-	FCMY01	24	5044	4880	1/21/16	3/27/17	Scaffold	SC	SAMEA2274089	GCA_001540645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/645/GCA_001540645.1_12045_8_13	-	2880STDY5683019
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65624	31.4	-	FBGF01	50	1718	1621	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683232	GCA_001489675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/675/GCA_001489675.1_EC3146	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.04651	54.8	-	FJZF01	66	4946	4695	4/5/16	3/28/17	Scaffold	SC	SAMEA2273366	GCA_900075785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/785/GCA_900075785.1_11983_6_47	-	e1517
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.12695	64.2	-	FVIQ01	22	5118	4979	3/10/17	3/18/17	Contig	SC	SAMEA2071540	GCA_900134055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/055/GCA_900134055.1_10396_8_7	-	403
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	4.93288	55	-	BEFF01	68	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089485	GCA_002334085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/085/GCA_002334085.1_ASM233408v1	-	TUM10692
Pseudomonas sp. BIOMIG1BDMA	1758177	PRJNA304216	304216	Proteobacteria	Gammaproteobacteria	7.46333	62.2	-	MCRT01	303	7028	6680	8/17/16	4/13/17	Scaffold	Bogazici University	SAMN04296809	GCA_001705845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/845/GCA_001705845.1_ASM170584v1	26992451	BIOMIG1BDMA
Streptomyces sp. di188	693491	PRJEB14566	326636	Terrabacteria group	Actinobacteria	6.61468	72.1	-	FMCG01	401	6338	5240	8/12/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04881429	GCA_900091805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/805/GCA_900091805.1_IMG-taxon_2657245712_annotated_assembly	-	di188
Streptomyces sp. DfronAA-171	1839777	PRJEB14572	326629	Terrabacteria group	Actinobacteria	7.29453	73.2	-	FMCL01	652	6626	5513	8/12/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04883159	GCA_900091815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/815/GCA_900091815.1_IMG-taxon_2657245719_annotated_assembly	-	DfronAA-171
Pseudomonas sp. BIOMIG1BD	1758731	PRJNA304216	304216	Proteobacteria	Gammaproteobacteria	7.4771	62.2	-	MCRU01	337	7052	6684	8/17/16	4/18/17	Scaffold	Bogazici University	SAMN04296810	GCA_001705885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/885/GCA_001705885.1_ASM170588v1	26992451	BIOMIG1BD
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	4.90398	55.1	-	BEFG01	79	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089486	GCA_002334105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/105/GCA_002334105.1_ASM233410v1	-	TUM10693
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.04838	64.2	-	FSEF01	33	5043	4901	12/14/16	3/21/17	Contig	SC	SAMEA2070785	GCA_900134065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/065/GCA_900134065.1_10396_8_6	-	401
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.90372	55.4	-	FJZG01	75	4860	4605	4/5/16	3/28/17	Scaffold	SC	SAMEA2273367	GCA_900075795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/795/GCA_900075795.1_11983_6_48	-	e1518
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75383	31.2	-	FBFG01	17	1836	1748	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683198	GCA_001489715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/715/GCA_001489715.1_EC5721	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.2972	59.9	-	FCGA01	26	5042	4876	1/21/16	3/27/17	Scaffold	SC	SAMEA2274088	GCA_001540665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/665/GCA_001540665.1_12045_8_12	-	2880STDY5683018
Clostridium botulinum B str. Eklund 17B (NRP)	935198	PRJEA60761	60761	Terrabacteria group	Firmicutes	3.8292	27.3701	chromosome:NC_018648.1/FR745875.1; plasmid p17BNRP:NC_018653.1/FR745876.1	-	2	3533	3353	9/24/12	3/23/17	Complete Genome	"The Wellcome Trust Sanger Institute, Cambridge"	SAMEA2272780	GCA_000307125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/125/GCA_000307125.1_ASM30712v1	23679073	B str. Eklund 17B(NRP)
Enterococcus faecium	1352	PRJNA283249	283249	Terrabacteria group	Firmicutes	2.85205	38	-	LDNC01	123	3023	2693	6/10/15	3/26/17	Contig	Seoul National University	SAMN03610563	GCA_001025255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/255/GCA_001025255.1_ASM102525v1	27070419	KACC15700
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.05928	52.6	-	MBCY01	159	2402	2086	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853032	GCA_001859975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/975/GCA_001859975.1_ASM185997v1	-	USO_NO2013-031
Enterococcus faecalis EnGen0406	1391476	PRJNA217009	217009	Terrabacteria group	Firmicutes	3.07305	37.3	-	JAHL01	9	3218	3038	1/13/14	4/10/17	Scaffold	Broad Institute	SAMN02333882	GCA_000519545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/545/GCA_000519545.1_Ente_faec_B294_V1	-	EnGen0406
Klebsiella pneumoniae CHS 70	1438774	PRJNA234239	234239	Proteobacteria	Gammaproteobacteria	5.96533	56.8	-	JMYN01	7	6017	5724	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581372	GCA_000694275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/275/GCA_000694275.1_Kleb_pneu_CHS_70_V1	-	CHS 70
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	4.99437	45.3	-	JNTD02	64	4813	4632	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741382	GCA_000707685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/685/GCA_000707685.2_ASM70768v2	"2,510,376,428,330,880"	CFSAN007446
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.03191	28.5	-	MOPN01	110	3676	3545	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710851	GCA_002301235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/235/GCA_002301235.1_ASM230123v1	-	5497-Y/ST2
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.05617	47.5	-	LGOI01	142	3850	3722	7/24/15	3/26/17	Contig	University of maryland	SAMN03839368	GCA_001186925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/925/GCA_001186925.1_ASM118692v1	-	NHCM-013
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.12995	68.2	-	LWWG01	245	7413	6811	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208596	GCA_001977465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/465/GCA_001977465.1_ASM197746v1	-	RF49-BP5
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.81502	50.6	-	CXAB01	412	5398	4690	7/16/15	2/24/17	Scaffold	SC	SAMEA2445763	GCA_001250095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/095/GCA_001250095.1_12971_8_71	-	H141120338
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.41103	38.3	-	FJGQ01	27	3117	3009	2/20/16	3/27/17	Contig	SC	SAMEA2077491	GCA_900060405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/405/GCA_900060405.1_10625_2_21	-	2532STDY5467494
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.09846	41.1	-	CZEH01	68	2085	1941	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595177	GCA_900009155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/155/GCA_900009155.1_assembly_861160	-	-
Streptococcus agalactiae SGBS027	1244104	PRJNA177838	177838	Terrabacteria group	Firmicutes	2.07101	35.3	-	AUWG01	22	2130	2011	8/26/13	3/15/17	Contig	MD Anderson Cancer Center	SAMN01774147	GCA_000455085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/085/GCA_000455085.1_Final_Assembly	-	SGBS027
Acinetobacter baumannii TG22214	1315168	PRJNA196287	196287	Proteobacteria	Gammaproteobacteria	3.90282	38.9	-	ASFX01	85	3737	3611	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055528	GCA_000453205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/205/GCA_000453205.1_ASM45320v1	-	TG22214
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.71713	66.1	-	JTOB01	106	6463	6224	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105716	GCA_000793045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/045/GCA_000793045.1_AZPAE15019	25367914	AZPAE15019
Streptococcus pyogenes	1314	PRJNA242686	242686	Terrabacteria group	Firmicutes	1.795	38.4	-	JHTQ01	72	1824	1715	5/7/14	3/24/17	Scaffold	Universidade Catolica de Brasilia	SAMN02708611	GCA_000685565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/565/GCA_000685565.1_SP3_contigs.fa	-	Lacen3
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05028	52.1	-	CMYT01	171	2323	2058	3/22/15	3/21/17	Contig	SC	SAMEA1031669	GCA_001165865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/865/GCA_001165865.1_6714_3_1	-	NM2032
Helicobacter pylori NAK7	1282880	PRJNA186589	186589	Proteobacteria	delta/epsilon subdivisions	1.58671	39	-	AONJ01	68	1566	1419	5/24/13	3/24/17	Contig	University of Hyderabad	SAMN02471799	GCA_000401295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/295/GCA_000401295.1_HelPylNAK7_1.0	-	NAK7
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.16507	39.4	-	CLNM01	83	2377	2138	3/21/15	3/11/17	Contig	SC	SAMEA1028800	GCA_001085545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/545/GCA_001085545.1_6938_8_23	-	SMRU2735
Candidatus Azobacteroides pseudotrichonymphae	511435	PRJDB5275	380367	FCB group	Bacteroidetes/Chlorobi group	1.01691	27.2675	chromosome I:NZ_AP017913.1/AP017913.1; chromosome II:NZ_AP017914.1/AP017914.1; plasmid pAPPJ1:NZ_AP017915.1/AP017915.1; plasmid pAPPJ2:NZ_AP017916.1/AP017916.1; plasmid pAPPJ3:NZ_AP017917.1/AP017917.1; plasmid pAPPJ4:NZ_AP017918.1/AP017918.1; plasmid pAPPJ5:NZ_AP017919.1/AP017919.1	-	7	849	791	3/24/17	7/3/17	Complete Genome	Tokyo Institute of Technology	SAMD00066057	GCA_002091395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/395/GCA_002091395.1_ASM209139v1	28321010	-
Mycobacterium tuberculosis TKK_03_0021	1448393	PRJNA235398	235398	Terrabacteria group	Actinobacteria	4.42155	65.5	-	JKAD01	5	4309	4127	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585888	GCA_000651375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/375/GCA_000651375.1_Myco_tube_TKK_03_0021_V1	-	TKK_03_0021
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.68678	32.1	-	JVKK01	132	2728	2600	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197544	GCA_001072495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/495/GCA_001072495.1_ASM107249v1	26230489	354_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.30136	35.3	-	MDYW01	61	5762	5423	9/2/16	3/28/17	Scaffold	"OARSA, CFSAN"	SAMN05608065	GCA_001719025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/025/GCA_001719025.1_ASM171902v1	-	MOD1_Bc140
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.06076	37.8	-	JPAE01	29	3127	3033	7/15/14	2/26/17	Contig	Cornell University	SAMN02741565	GCA_000727625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/625/GCA_000727625.1_ASM72762v1	-	FSL R8-6808
Yersinia pestis FV-1	375450	PRJNA16429	16429	Proteobacteria	Gammaproteobacteria	4.47265	47.6	-	AAUB01	400	-	-	10/13/06	11/18/13	Contig	TGen	SAMN02404406	GCA_000168835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/835/GCA_000168835.1_ASM16883v1	17311096	FV-1
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.63697	30.4	-	CUNI01	18	1721	1620	3/31/15	3/18/17	Contig	SC	SAMEA1010259	GCA_001227845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/845/GCA_001227845.1_7065_7_58	-	OXC6406
Mycoplasma canis PG 14	1117644	PRJNA311198	311198	Terrabacteria group	Tenericutes	0.897443	27.2	chromosome:NZ_CP014281.1/CP014281.1	-	1	700	623	2/8/16	4/4/17	Complete Genome	University of Florida	SAMN02471767	GCA_001553195.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/195/GCA_001553195.1_ASM155319v1	-	PG 14
Staphylococcus aureus M0799	1158698	PRJNA88695	88695	Terrabacteria group	Firmicutes	2.95433	33.1	-	AIXR01	12	3099	2928	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809038	GCA_000362005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/005/GCA_000362005.1_Stap_aure_M0799_V1	-	M0799
Staphylococcus aureus M0822	1213727	PRJNA171271	171271	Terrabacteria group	Firmicutes	2.87969	32.8	-	AOAF01	8	3031	2867	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN01047810	GCA_000362025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/025/GCA_000362025.1_Stap_aure_M0822_V1	-	M0822
Strawberry lethal yellows phytoplasma (CPA) str. NZSb11	980422	PRJNA62247	62247	Terrabacteria group	Tenericutes	0.959779	27.2	chromosome:NC_021236.1/CP002548.1	-	1	974	861	5/16/13	4/8/17	Complete Genome	The New Zealand  Institute for Plant and Food Ltd	SAMN02603946	GCA_000397185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/185/GCA_000397185.1_ASM39718v1	23915186	NZSb11
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.6377	30.5	-	CUPI01	8	1705	1616	3/31/15	3/18/17	Contig	SC	SAMEA1010672	GCA_001228005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/005/GCA_001228005.1_7092_1_2	-	OXC6448
Yersinia pestis 2654	755865	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.3526	47.6	-	ADPB01	2718	-	-	12/7/12	11/15/13	Contig	Beijing Genomics Institute	SAMN02402997	GCA_000323245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/245/GCA_000323245.1_ASM32324v1	23271803	2654
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09591	37.7	-	JOZU01	34	3195	3093	7/15/14	2/26/17	Contig	Cornell University	SAMN02741555	GCA_000727635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/635/GCA_000727635.1_ASM72763v1	-	FSL R8-6691
Bacillus cereus	1396	PRJNA348321	348321	Terrabacteria group	Firmicutes	5.31014	35.1	-	MLYK01	109	5667	5408	12/8/16	3/28/17	Scaffold	Anses	SAMN05907188	GCA_001895235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/235/GCA_001895235.1_ASM189523v1	-	16SBCL1279
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.62462	31.9	-	JVKA01	90	2592	2461	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197554	GCA_001072555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/555/GCA_001072555.1_ASM107255v1	26230489	364_SEPI
Mycobacterium tuberculosis TKK_03_0023	1448394	PRJNA235399	235399	Terrabacteria group	Actinobacteria	4.4185	65.6	-	JKAC01	6	4293	4117	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585889	GCA_000651395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/395/GCA_000651395.1_Myco_tube_TKK_03_0023_V1	-	TKK_03_0023
Fusobacterium nucleatum subsp. nucleatum ATCC 25586	190304	PRJNA295	295	Fusobacteria	Fusobacteriia	2.1745	27.2	chromosome:NC_003454.1/AE009951.2	-	1	2062	1983	2/13/02	8/3/16	Complete Genome	Integrated Genomics	SAMN02603417	GCA_000007325.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/325/GCA_000007325.1_ASM732v1	11889109	ATCC 25586
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12505	39.7	-	CLVP01	58	2372	2157	3/21/15	3/14/17	Contig	SC	SAMEA1025825	GCA_001085565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/565/GCA_001085565.1_6983_4_73	-	SMRU2281
Helicobacter pylori UM018	1287061	PRJNA187431	187431	Proteobacteria	delta/epsilon subdivisions	1.61455	39.1	-	AONK01	72	1592	1430	5/24/13	3/24/17	Contig	University of Hyderabad	SAMN02471803	GCA_000401315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/315/GCA_000401315.1_HelPylUM018_1.0	-	UM018
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05363	52.1	-	CMYM01	155	2295	2052	3/23/15	3/21/17	Contig	SC	SAMEA1031715	GCA_001166965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/965/GCA_001166965.1_6714_2_5	-	NM1831
Streptococcus pyogenes MGAS10270	370552	PRJEB9637	287346	Terrabacteria group	Firmicutes	1.94851	38.3	-	CVUH01	22	1988	1853	6/19/15	4/10/17	Scaffold	URMITE	SAMEA3460950	GCA_001182065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/065/GCA_001182065.1_Streptococcus_pyogenes	-	G773
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.16319	65.8	-	JTOA01	129	7037	6782	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105717	GCA_000793055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/055/GCA_000793055.1_AZPAE15020	25367914	AZPAE15020
Acinetobacter baumannii TG22332	1315169	PRJNA196288	196288	Proteobacteria	Gammaproteobacteria	4.09128	38.8	-	ASFY01	62	3962	3823	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055529	GCA_000453225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/225/GCA_000453225.1_ASM45322v1	-	TG22332
Streptococcus agalactiae SGBS029	1244105	PRJNA177839	177839	Terrabacteria group	Firmicutes	2.06451	35.3	-	AUWH01	22	2125	2009	8/26/13	3/15/17	Contig	MD Anderson Cancer Center	SAMN01774148	GCA_000455105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/105/GCA_000455105.1_Final_Assembly	-	SGBS029
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	1.99218	41.4	-	CZFH01	37	2001	1897	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595221	GCA_900009165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/165/GCA_900009165.1_assembly_GD-0023	-	-
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54075	38.3	-	FJII01	61	3237	3089	2/20/16	3/27/17	Contig	SC	SAMEA2077745	GCA_900060415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/415/GCA_900060415.1_10625_2_69	-	2532STDY5467542
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.55921	50.8	-	CWXL01	368	5023	4352	7/16/15	2/24/17	Scaffold	SC	SAMEA2445698	GCA_001250115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/115/GCA_001250115.1_12971_8_18	-	H084560209
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.05898	68.2	-	LWWH01	406	7403	6721	1/31/17	4/29/17	Contig	Northern Arizona University	SAMN04208597	GCA_001977475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/475/GCA_001977475.1_ASM197747v1	-	RF49-BP7
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.05488	47.5	-	LGOJ01	88	3872	3719	7/24/15	3/26/17	Contig	University of maryland	SAMN03839369	GCA_001186965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/965/GCA_001186965.1_ASM118696v1	-	NHCM-016A
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.32177	29.4	-	MOPP01	456	3740	3601	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710852	GCA_002301245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/245/GCA_002301245.1_ASM230124v1	-	5500-DH/ST42
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	4.99847	45.3	-	JNTE02	50	4768	4576	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741383	GCA_000707705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/705/GCA_000707705.2_ASM70770v2	"2,510,376,428,330,880"	CFSAN007447
Klebsiella pneumoniae CHS 71	1438775	PRJNA234240	234240	Proteobacteria	Gammaproteobacteria	5.88405	56.9	-	JMYO01	9	5966	5683	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581373	GCA_000694295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/295/GCA_000694295.1_Kleb_pneu_CHS_71_V1	-	CHS 71
Enterococcus faecalis EnGen0407	1391477	PRJNA217010	217010	Terrabacteria group	Firmicutes	2.73747	37.8	-	JAHM01	2	2732	2617	1/13/14	3/24/17	Scaffold	Broad Institute	SAMN02333883	GCA_000519565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/565/GCA_000519565.1_Ente_faec_B301_V1	-	EnGen0407
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.05352	52.7	-	MBCZ01	186	2372	2071	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853033	GCA_001859995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/995/GCA_001859995.1_ASM185999v1	-	USO_NO2013-060
Enterococcus faecium	1352	PRJNA280914	280914	Terrabacteria group	Firmicutes	2.82423	38	-	LBIT01	128	2938	2681	6/10/15	3/26/17	Contig	Kangwon National University	SAMN03480650	GCA_001025265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/265/GCA_001025265.1_ASM102526v1	27070419	KACC 15689
Brachyspira intermedia PWS/A	1045858	PRJNA68051	68051	Spirochaetes	Spirochaetia	3.30805	27.1939	chromosome:NC_017243.1/CP002874.1; plasmid pInt:NC_017242.1/CP002875.1	-	2	2884	2689	8/10/11	4/17/17	Complete Genome	National Veterinary Institute (SVA)	SAMN02603670	GCA_000223215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/223/215/GCA_000223215.1_ASM22321v1	21816042	PWS/A
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.23943	59.9	-	FCKO01	13	5051	4892	1/21/16	3/27/17	Scaffold	SC	SAMEA2273972	GCA_001540685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/685/GCA_001540685.1_12082_3_6	-	2880STDY5682899
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.69372	31.3	-	FBKM01	41	1766	1666	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683337	GCA_001489735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/735/GCA_001489735.1_H063900401	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.01211	54.8	-	FJZE01	54	4915	4670	4/5/16	3/28/17	Scaffold	SC	SAMEA2273364	GCA_900075805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/805/GCA_900075805.1_11983_6_45	-	e1488
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23035	64	-	FSEI01	20	5260	5154	12/14/16	3/21/17	Contig	SC	SAMEA2071197	GCA_900134125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/125/GCA_900134125.1_10625_4_73	-	73
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	4.90105	55.1	-	BEFH01	117	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089487	GCA_002334125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/125/GCA_002334125.1_ASM233412v1	-	TUM10694
Pseudomonas sp. BIOMIG1BAC	1758730	PRJNA304216	304216	Proteobacteria	Gammaproteobacteria	7.50945	62.2	-	MCRS01	316	7093	6729	8/17/16	4/18/17	Scaffold	Bogazici University	SAMN04296808	GCA_001705995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/995/GCA_001705995.1_ASM170599v1	26992451	BIOMIG1BAC
Streptomyces sp. SolWspMP-sol7th	1839776	PRJEB14567	326633	Terrabacteria group	Actinobacteria	6.50443	73	-	FMCN01	1185	5967	4326	8/12/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04883158	GCA_900091825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/825/GCA_900091825.1_IMG-taxon_2657245713_annotated_assembly	-	SolWspMP-sol7th
Streptomyces sp. PpalLS-921	1839772	PRJEB14569	326642	Terrabacteria group	Actinobacteria	7.37129	72	-	FMBY01	190	6508	5964	8/12/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04883149	GCA_900091835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/835/GCA_900091835.1_IMG-taxon_2657245716_annotated_assembly	-	PpalLS-921
Pseudomonas sp. PA1(2017)	1932113	PRJNA359501	359501	Proteobacteria	Gammaproteobacteria	5.28562	63.1	-	MSXU01	17	4786	4642	1/11/17	4/16/17	Scaffold	Centro de Investigacion y de Estudios Avanzados del IPN	SAMN06192266	GCA_001945375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/375/GCA_001945375.1_ASM194537v1	-	PA1
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	4.90382	55	-	BEFI01	124	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089488	GCA_002334145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/145/GCA_002334145.1_ASM233414v1	-	TUM10695
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.91387	64.3	-	FVIX01	16	4868	4737	3/10/17	8/7/17	Contig	SC	SAMEA2070704	GCA_900134135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/135/GCA_900134135.1_10625_4_78	-	78
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.64328	56.1	-	FJZI01	23	4487	4306	4/5/16	3/28/17	Scaffold	SC	SAMEA2273372	GCA_900075815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/815/GCA_900075815.1_12082_4_48	-	e1527
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.77787	31.2	-	FBFO01	28	1859	1757	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683206	GCA_001489755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/755/GCA_001489755.1_SS_2249	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.24414	59.7	-	FCKZ01	20	5016	4861	1/21/16	3/27/17	Scaffold	SC	SAMEA2274045	GCA_001540705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/705/GCA_001540705.1_12082_3_70	-	2880STDY5682973
Fusobacterium hwasookii ChDC F206	1307443	PRJNA270138	270138	Fusobacteria	Fusobacteriia	2.43052	27.1906	chromosome:NZ_CP013336.1/CP013336.1; plasmid unnamed:NZ_CP013337.1/CP013337.1	-	2	2411	2266	12/2/15	4/4/17	Complete Genome	Chosun University	SAMN03263145	GCA_001455085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/085/GCA_001455085.1_ASM145508v1	-	ChDC F206
Enterococcus faecium	1352	PRJNA283249	283249	Terrabacteria group	Firmicutes	2.71958	38.2	-	LDNF01	102	2817	2580	6/10/15	3/26/17	Contig	Seoul National University	SAMN03610566	GCA_001025315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/315/GCA_001025315.1_ASM102531v1	27070419	KACC15962
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.05993	52.7	-	MBDA01	157	2388	2075	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853034	GCA_001860025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/025/GCA_001860025.1_ASM186002v1	-	USO_G13-777
Enterococcus faecalis EnGen0408	1391478	PRJNA217011	217011	Terrabacteria group	Firmicutes	3.14707	37.3	-	JAHN01	7	3281	3121	1/13/14	3/24/17	Scaffold	Broad Institute	SAMN02333884	GCA_000519585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/585/GCA_000519585.1_Ente_faec_B302_V1	-	EnGen0408
Klebsiella pneumoniae CHS 72	1438776	PRJNA234241	234241	Proteobacteria	Gammaproteobacteria	5.721	57.1	-	JMYP01	5	5762	5519	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581374	GCA_000694315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/315/GCA_000694315.1_Kleb_pneu_CHS_72_V1	-	CHS 72
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.37185	45	-	JNTF02	95	5275	5045	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741384	GCA_000707725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/725/GCA_000707725.2_ASM70772v2	"2,510,376,428,330,880"	CFSAN007448
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.07646	28.4	-	MOPO01	124	3723	3566	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710853	GCA_002301255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/255/GCA_002301255.1_ASM230125v1	-	5502-NonSp/novelST
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.27035	47	-	LGOK01	212	4147	4026	7/24/15	3/26/17	Contig	University of maryland	SAMN03839370	GCA_001186985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/985/GCA_001186985.1_ASM118698v1	-	NHCM-017
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.12383	68.2	-	LWWI01	169	7413	6832	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208598	GCA_001977495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/495/GCA_001977495.1_ASM197749v1	-	NRF57-BP22
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.53593	50.6	-	CXBR01	424	4851	4305	7/16/15	2/24/17	Scaffold	SC	SAMEA954570	GCA_001250155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/155/GCA_001250155.1_5236_2_2	-	ShIB1987_440754
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.5406	38.3	-	FJIM01	59	3237	3092	2/20/16	3/27/17	Contig	SC	SAMEA2077542	GCA_900060445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/445/GCA_900060445.1_10625_2_64	-	2532STDY5467537
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.06896	41.4	-	CZFW01	28	2106	1949	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595235	GCA_900009175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/175/GCA_900009175.1_assembly_GD-0057	-	-
Streptococcus agalactiae BV3L5	1161427	PRJNA89643	89643	Terrabacteria group	Firmicutes	2.13965	35.5	-	AZIR01	69	2210	2114	12/18/13	3/15/17	Contig	JCVI	SAMN00829147	GCA_000510405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/510/405/GCA_000510405.1_SaBV3L5v1.0	-	BV3L5
Acinetobacter baumannii TG22336	1315170	PRJNA196289	196289	Proteobacteria	Gammaproteobacteria	4.1602	38.7	-	ASFZ01	45	4050	3911	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055530	GCA_000453245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/245/GCA_000453245.1_ASM45324v1	-	TG22336
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.68642	66.1	-	JTNZ01	129	6472	6235	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105718	GCA_000793085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/085/GCA_000793085.1_AZPAE15021	25367914	AZPAE15021
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.8787	38.3	-	LRGR01	19	1920	1830	5/6/16	3/28/17	Scaffold	Menzies School of Health Research	SAMN03988138	GCA_001638275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/275/GCA_001638275.1_ASM163827v1	-	SST2095-1
Neisseria meningitidis	487	PRJNA244709	244709	Proteobacteria	Betaproteobacteria	2.1268	51.6	-	JMBH01	119	2475	2106	7/20/15	3/21/17	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02728055	GCA_001183465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/465/GCA_001183465.1_Nm330505	25989189	330505
Helicobacter pylori UM054	1287062	PRJNA187433	187433	Proteobacteria	delta/epsilon subdivisions	1.59447	39.1	-	AONL01	81	1575	1432	5/24/13	3/24/17	Contig	University of Hyderabad	SAMN02471804	GCA_000401335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/335/GCA_000401335.1_HelPylUM054_1.0	-	UM054
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.03475	39.7	-	CLOU01	89	2236	2026	3/21/15	3/11/17	Contig	SC	SAMEA1028731	GCA_001085585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/585/GCA_001085585.1_6949_2_16	-	SMRU2440
Blattabacterium sp. (Blattella germanica) str. Bge	331104	PRJNA31103	31103	FCB group	Bacteroidetes/Chlorobi group	0.640935	27.1172	chromosome:NC_013454.1/CP001487.1; plasmid pBge:NC_015679.1/CP002849.1	-	2	633	577	11/2/09	4/17/17	Complete Genome	University of Valencia	SAMN02604249	GCA_000022605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/605/GCA_000022605.2_ASM2260v1	19911043	Alboraia
Mycobacterium tuberculosis TKK_03_0024	1448395	PRJNA235400	235400	Terrabacteria group	Actinobacteria	4.42663	65.5	-	JKAB01	8	4305	4120	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585890	GCA_000651415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/415/GCA_000651415.1_Myco_tube_TKK_03_0024_V1	-	TKK_03_0024
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.56107	31.8	-	JVJZ01	79	2509	2401	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197555	GCA_001072575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/575/GCA_001072575.1_ASM107257v1	26230489	365_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.8036	35.2	-	MIFF01	88	6299	5944	12/13/16	3/28/17	Scaffold	"OARSA, CFSAN"	SAMN05415720	GCA_001901815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/815/GCA_001901815.1_ASM190181v1	-	MOD1_Bc67
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.0635	37.9	-	JOZF01	20	3103	3010	7/15/14	2/26/17	Contig	Cornell University	SAMN02741540	GCA_000727655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/655/GCA_000727655.1_ASM72765v1	-	FSL R8-6446
Yersinia pestis 42082	755876	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.49667	47.6	-	ADPH01	2049	-	-	12/7/12	11/15/13	Contig	Beijing Genomics Institute	SAMN02403003	GCA_000323385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/385/GCA_000323385.1_ASM32338v1	23271803	42082
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66721	30.4	-	CUUC01	15	1751	1657	3/31/15	3/18/17	Contig	SC	SAMEA1401016	GCA_001228165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/165/GCA_001228165.1_7213_3_47	-	OXC6590
Fusobacterium hwasookii ChDC F174	1307442	PRJNA270134	270134	Fusobacteria	Fusobacteriia	2.53172	27.1169	chromosome:NZ_CP013331.1/CP013331.1; plasmid unnamed1:NZ_CP013332.1/CP013332.1; plasmid unnamed2:NZ_CP013333.1/CP013333.1	-	3	2408	2263	12/2/15	4/4/17	Complete Genome	Chosun University	SAMN03263088	GCA_001455145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/145/GCA_001455145.1_ASM145514v1	-	ChDC F174
Staphylococcus aureus M0823	1158699	PRJNA88697	88697	Terrabacteria group	Firmicutes	2.9756	33	-	AIXS01	11	3128	2946	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809039	GCA_000362045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/045/GCA_000362045.1_Stap_aure_M0823_V1	-	M0823
Staphylococcus aureus M0831	1213728	PRJNA171272	171272	Terrabacteria group	Firmicutes	2.95778	32.9	-	AOAG01	1	3154	2980	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN01047811	GCA_000362065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/065/GCA_000362065.1_Stap_aure_M0831_V1	-	M0831
Fusobacterium hwasookii ChDC F300	1307444	PRJNA270142	270142	Fusobacteria	Fusobacteriia	2.52706	27.1017	chromosome:NZ_CP013334.1/CP013334.1; plasmid unnamed:NZ_CP013335.1/CP013335.1	-	2	2501	2350	12/2/15	4/4/17	Complete Genome	Chosun University	SAMN03263150	GCA_001455105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/105/GCA_001455105.1_ASM145510v1	-	ChDC F300
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.73394	30.2	-	CUPM01	14	1840	1711	3/31/15	3/18/17	Contig	SC	SAMEA1010327	GCA_001228225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/225/GCA_001228225.1_7092_1_22	-	OXC6469
Yersinia pestis CMCC107004	755905	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.45558	47.5	-	ADQJ01	2814	-	-	12/7/12	11/15/13	Contig	Beijing Genomics Institute	SAMN02403032	GCA_000323945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/323/945/GCA_000323945.1_ASM32394v1	23271803	CMCC107004
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09417	37.9	-	JOZB01	22	3131	3045	7/15/14	2/26/17	Contig	Cornell University	SAMN02741536	GCA_000727665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/665/GCA_000727665.1_ASM72766v1	-	FSL R8-6345
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.45044	35.3	-	MIFE01	77	5919	5605	12/13/16	3/28/17	Scaffold	"OARSA, CFSAN"	SAMN05415765	GCA_001901885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/885/GCA_001901885.1_ASM190188v1	-	MOD1_Bc113
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.63249	31.9	-	JVJY01	91	2607	2477	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197556	GCA_001072595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/595/GCA_001072595.1_ASM107259v1	26230489	366_SEPI
Mycobacterium tuberculosis TKK_03_0028	1448396	PRJNA235401	235401	Terrabacteria group	Actinobacteria	4.40456	65.6	-	JKAA01	5	4299	4099	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585891	GCA_000651435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/435/GCA_000651435.1_Myco_tube_TKK_03_0028_V1	-	TKK_03_0028
Arcobacter butzleri	28197	PRJEB6403	251923	Proteobacteria	delta/epsilon subdivisions	2.34761	27.1	chromosome 1:NZ_LT906455.1/LT906455.1	-	1	2333	2253	8/15/17	8/28/17	Complete Genome	SC	SAMEA4475700	GCA_900187115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/115/GCA_900187115.1_51699_F01	-	NCTC 12481
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.13339	39.7	-	CNTD02	174	2326	2107	3/23/15	3/11/17	Contig	SC	SAMEA1032723	GCA_001085645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/645/GCA_001085645.2_6999_3_7	-	18044
Helicobacter pylori UM007	1287063	PRJNA187435	187435	Proteobacteria	delta/epsilon subdivisions	1.57585	38.8	-	AONM01	72	1546	1407	5/24/13	3/24/17	Contig	University of Hyderabad	SAMN02471798	GCA_000401355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/355/GCA_000401355.1_HelPylUM007_1.0	-	UM007
Neisseria meningitidis serogroup B	491	PRJEB5731	271460	Proteobacteria	Betaproteobacteria	2.15142	51.7	-	CVTF01	144	2515	2132	7/9/15	3/21/17	Contig	Seydina	SAMEA3139803	GCA_001245455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/455/GCA_001245455.1_Neisseria_meningitidis_CHUV	-	Neisseria meningitidis CHUV
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.79276	38.3	-	LRGG01	20	1803	1709	5/6/16	3/28/17	Scaffold	Menzies School of Health Research	SAMN03988139	GCA_001638325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/325/GCA_001638325.1_ASM163832v1	-	SST1020-1
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.21936	66.6	-	JTNY01	68	5890	5738	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105719	GCA_000793105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/105/GCA_000793105.1_AZPAE15022	25367914	AZPAE15022
Acinetobacter baumannii TG27295	1315171	PRJNA196290	196290	Proteobacteria	Gammaproteobacteria	3.91288	38.8	-	ASGA01	91	3779	3629	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055531	GCA_000453265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/265/GCA_000453265.1_ASM45326v1	-	TG27295
Streptococcus agalactiae	1311	PRJNA255947	255947	Terrabacteria group	Firmicutes	2.17378	35.6	-	JPOV01	8	2215	2083	7/30/14	3/16/17	Contig	Cork Institute of Technology	SAMN02934115	GCA_000736485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/485/GCA_000736485.1_ASM73648v1	25189584	NGS-ED-1000
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.05182	41.2	-	CZFU01	41	2066	1955	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595238	GCA_900009185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/185/GCA_900009185.1_assembly_GD-0065	-	-
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54194	38.3	-	FJKQ01	58	3241	3094	2/20/16	3/27/17	Contig	SC	SAMEA2077757	GCA_900060455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/455/GCA_900060455.1_10625_3_15	-	2532STDY5467584
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.58169	50.8	-	CXID01	377	5070	4377	7/16/15	2/24/17	Scaffold	SC	SAMEA2003852	GCA_001250175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/175/GCA_001250175.1_8289_7_61	-	82723
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.13394	68.2	-	LWWJ01	173	7413	6834	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208599	GCA_001977525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/525/GCA_001977525.1_ASM197752v1	-	NRF57-BP62
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.05832	47.5	-	LGOL01	86	3890	3710	7/24/15	3/26/17	Contig	University of maryland	SAMN03839371	GCA_001186995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/995/GCA_001186995.1_ASM118699v1	-	NHCM-029
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.1919	28.6	-	MOPQ01	167	3921	3752	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710854	GCA_002301265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/265/GCA_002301265.1_ASM230126v1	-	5503-Y/ST2
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.11932	45.3	-	JNTG02	55	4871	4728	6/13/14	3/20/17	Contig	FDA/CFSAN	SAMN02741385	GCA_000707745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/745/GCA_000707745.2_ASM70774v2	"2,465,565,925,103,760"	CFSAN007449
Klebsiella pneumoniae CHS 73	1438777	PRJNA234242	234242	Proteobacteria	Gammaproteobacteria	5.87918	56.9	-	JMYQ01	8	5971	5693	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581375	GCA_000694335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/335/GCA_000694335.1_Kleb_pneu_CHS_73_V1	-	CHS 73
Enterococcus faecalis EnGen0409	1391479	PRJNA217012	217012	Terrabacteria group	Firmicutes	2.8749	37.7	-	JAHO01	4	2915	2744	1/13/14	3/24/17	Scaffold	Broad Institute	SAMN02333885	GCA_000519605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/605/GCA_000519605.1_Ente_faec_B312_V1	-	EnGen0409
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.08477	52.4	-	MBDB01	153	2399	2118	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853035	GCA_001860045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/045/GCA_001860045.1_ASM186004v1	-	USO_IT3001
Enterococcus faecium	1352	PRJNA283249	283249	Terrabacteria group	Firmicutes	2.71929	38.1	-	LDNG01	73	2808	2547	6/10/15	3/26/17	Contig	Seoul National University	SAMN03610567	GCA_001025325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/325/GCA_001025325.1_ASM102532v1	27070419	KACC16076
Fusobacterium nucleatum subsp. nucleatum	76856	PRJNA270127	270127	Fusobacteria	Fusobacteriia	2.23301	27.1	chromosome:NZ_CP022122.1/CP022122.1	-	1	2172	2016	6/30/17	7/3/17	Complete Genome	Chosun University	SAMN03263083	GCA_002211605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/605/GCA_002211605.1_ASM221160v1	-	ChDC F317
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.13492	60	-	FCGY01	15	4885	4729	1/21/16	3/27/17	Scaffold	SC	SAMEA2273917	GCA_001540725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/725/GCA_001540725.1_12082_2_52	-	2880STDY5682844
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.97526	31.1	-	FBDX01	328	2061	1866	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683161	GCA_001489815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/815/GCA_001489815.1_SS_2284	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.71706	55.5	-	FJZH01	34	4598	4396	4/5/16	3/28/17	Scaffold	SC	SAMEA2273371	GCA_900075825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/825/GCA_900075825.1_11983_6_52	-	e1521
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.91457	64.3	-	FVIV01	17	4866	4739	3/10/17	3/18/17	Contig	SC	SAMEA2070293	GCA_900134145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/145/GCA_900134145.1_10625_4_77	-	77
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.0017	55	-	BEFJ01	115	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089489	GCA_002334165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/165/GCA_002334165.1_ASM233416v1	-	TUM10696
Pseudomonas sp. PA15(2017)	1932111	PRJNA359503	359503	Proteobacteria	Gammaproteobacteria	5.49344	63.2	-	MSXV01	60	5108	4890	1/11/17	4/16/17	Scaffold	Centro de Investigacion y de Estudios Avanzados del IPN	SAMN06192267	GCA_001945395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/395/GCA_001945395.1_ASM194539v1	-	PA15
Streptomyces sp. SolWspMP-5a-2	1838281	PRJEB14563	326637	Terrabacteria group	Actinobacteria	8.95661	73	-	FMCI01	400	7884	7182	8/12/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04875601	GCA_900091845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/845/GCA_900091845.1_IMG-taxon_2657245709_annotated_assembly	-	SolWspMP-5a-2
Streptomyces sp. DvalAA-14	1839759	PRJEB14561	326639	Terrabacteria group	Actinobacteria	7.94418	71.9	-	FMCH01	670	7033	6168	8/12/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04883092	GCA_900091855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/855/GCA_900091855.1_IMG-taxon_2657245707_annotated_assembly	-	DvalAA-14
Pseudomonas sp. PA27(2017)	1932112	PRJNA359513	359513	Proteobacteria	Gammaproteobacteria	5.40028	63.1	-	MSXW01	64	4952	4776	1/11/17	4/16/17	Scaffold	Centro de Investigacion y de Estudios Avanzados del IPN	SAMN06192268	GCA_001945445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/445/GCA_001945445.1_ASM194544v1	-	PA27
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.23653	54.8	-	BEFK01	167	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089490	GCA_002334185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/185/GCA_002334185.1_ASM233418v1	-	TUM10697
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.9146	64.3	-	FVJF01	15	4868	4740	3/10/17	3/18/17	Contig	SC	SAMEA2071199	GCA_900134165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/165/GCA_900134165.1_10625_4_79	-	79
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.97808	55.3	-	FJZJ01	51	4865	4647	4/5/16	3/28/17	Scaffold	SC	SAMEA2273373	GCA_900075835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/835/GCA_900075835.1_11983_6_53	-	e1531
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.5712	31.8	-	FBMZ01	34	1573	1515	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683403	GCA_001489835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/835/GCA_001489835.1_H075200522	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.1093	60.1	-	FCJU01	28	4801	4649	1/21/16	3/27/17	Scaffold	SC	SAMEA2273969	GCA_001540745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/745/GCA_001540745.1_12082_3_4	-	2880STDY5682896
Fusobacterium nucleatum subsp. animalis	76859	PRJNA270152	270152	Fusobacteria	Fusobacteriia	2.3108	27.1	chromosome:NZ_CP012715.1/CP012715.1	-	1	2273	2143	9/22/15	4/4/17	Complete Genome	Chosun University	SAMN03263585	GCA_001296145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/145/GCA_001296145.1_ASM129614v1	-	KCOM 1325
Enterococcus faecium	1352	PRJNA283249	283249	Terrabacteria group	Firmicutes	2.58528	38.1	-	LDNH01	96	2647	2436	6/10/15	3/26/17	Contig	Seoul National University	SAMN03610568	GCA_001025335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/335/GCA_001025335.1_ASM102533v1	27070419	KACC16093
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	2.10421	52.5	-	MBDC01	152	2432	2137	11/1/16	4/11/17	Contig	Orebro University Hospital	SAMN04853036	GCA_001860055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/055/GCA_001860055.1_ASM186005v1	-	USO_IT3020
Enterococcus faecalis EnGen0410	1391480	PRJNA217013	217013	Terrabacteria group	Firmicutes	3.17517	37.2	-	JAHP01	4	3335	3144	1/13/14	3/24/17	Scaffold	Broad Institute	SAMN02333886	GCA_000519625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/625/GCA_000519625.1_Ente_faec_B316_V1	-	EnGen0410
Klebsiella pneumoniae CHS 74	1438778	PRJNA234243	234243	Proteobacteria	Gammaproteobacteria	5.9361	56.9	-	JMYR01	20	6045	5722	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581376	GCA_000694355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/355/GCA_000694355.1_Kleb_pneu_CHS_74_V1	-	CHS 74
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.114	45.3	-	JNTH02	65	4871	4724	6/13/14	3/20/17	Contig	FDA/CFSAN	SAMN02741386	GCA_000707765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/765/GCA_000707765.2_ASM70776v2	"2,465,565,925,103,760"	CFSAN007450
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.19867	28.7	-	MOPZ01	328	3735	3599	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710863	GCA_002301305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/305/GCA_002301305.1_ASM230130v1	-	5547-DH/ST42
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.03187	47.5	-	LGOP01	122	3797	3671	7/24/15	3/26/17	Contig	University of maryland	SAMN03839375	GCA_001187015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/015/GCA_001187015.1_ASM118701v1	-	NHCM-044
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.12968	68.2	-	LWWK01	151	7401	6846	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208600	GCA_001977545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/545/GCA_001977545.1_ASM197754v1	-	NRF57-BP64
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.69823	50.7	-	CWYL01	392	5231	4514	7/16/15	2/24/17	Scaffold	SC	SAMEA2445714	GCA_001250215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/215/GCA_001250215.1_12971_8_31	-	H101700383
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.34807	38.3	-	FJCT01	25	3056	2944	2/20/16	3/27/17	Contig	SC	SAMEA2064364	GCA_900060695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/695/GCA_900060695.1_10771_3_10	-	2531STDY5467387
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.01937	41.3	-	CZHC01	44	2041	1946	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595269	GCA_900009205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/205/GCA_900009205.1_assembly_S10	-	-
Streptococcus agalactiae	1311	PRJEB7452	269532	Terrabacteria group	Firmicutes	2.03042	35.2	-	CDEN01	104	2080	1987	12/5/14	3/16/17	Contig	INSTITUT PASTEUR	SAMEA2803882	GCA_000825945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/945/GCA_000825945.1_Bangui-IP-6	-	Bangui-IP-6
Acinetobacter baumannii TG27299	1315172	PRJNA196291	196291	Proteobacteria	Gammaproteobacteria	4.08537	39	-	ASGB01	138	3982	3829	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055532	GCA_000453285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/285/GCA_000453285.1_ASM45328v1	-	TG27299
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.35135	66.4	-	JTNX01	101	6089	5885	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105720	GCA_000793125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/125/GCA_000793125.1_AZPAE15023	25367914	AZPAE15023
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.8013	38.3	-	LRGH01	16	1822	1716	5/6/16	3/28/17	Scaffold	Menzies School of Health Research	SAMN03988140	GCA_001638345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/345/GCA_001638345.1_ASM163834v1	-	SST1021-1
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.04331	52.1	-	CHAX01	202	2286	2042	4/21/15	3/21/17	Contig	SC	SAMEA1031656	GCA_001349135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/135/GCA_001349135.1_6714_3_5	-	NM2188
Helicobacter pylori UM034	1287064	PRJNA187437	187437	Proteobacteria	delta/epsilon subdivisions	1.60843	38.7	-	AONN01	65	1578	1433	5/24/13	3/24/17	Contig	University of Hyderabad	SAMN02471800	GCA_000401375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/375/GCA_000401375.1_HelPylUM034_1.0	-	UM034
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.09859	39.7	-	CLLH01	49	2322	2097	3/21/15	3/11/17	Contig	SC	SAMEA1028607	GCA_001085805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/805/GCA_001085805.1_6938_5_8	-	SMRU2648
Fusobacterium nucleatum subsp. nucleatum ChDC F316	1307428	PRJNA270149	270149	Fusobacteria	Fusobacteriia	2.22727	27.1	chromosome:NZ_CP012716.1/CP012716.1	-	1	2160	2011	9/22/15	4/4/17	Complete Genome	Chosun University	SAMN03263583	GCA_001296165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/165/GCA_001296165.1_ASM129616v1	-	KCOM 1322
Mycobacterium tuberculosis TKK_03_0035	1448397	PRJNA235402	235402	Terrabacteria group	Actinobacteria	4.42121	65.5	-	JJZZ01	4	4291	4116	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585892	GCA_000651455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/455/GCA_000651455.1_Myco_tube_TKK_03_0035_V1	-	TKK_03_0035
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.50429	31.8	-	JVJF01	145	2466	2367	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197575	GCA_001072685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/685/GCA_001072685.1_ASM107268v1	26230489	384_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.52081	35.2	-	MIFD01	108	5974	5609	12/13/16	3/28/17	Scaffold	"OARSA, CFSAN"	SAMN05415740	GCA_001901895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/895/GCA_001901895.1_ASM190189v1	-	MOD1_Bc111
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.06068	37.8	-	JOZE01	29	3126	3034	7/15/14	2/26/17	Contig	Cornell University	SAMN02741539	GCA_000727705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/705/GCA_000727705.1_ASM72770v1	-	FSL R8-6426
Yersinia pestis CMCC84038	755941	PRJNA47685	47685	Proteobacteria	Gammaproteobacteria	4.43854	47.6	-	ADRF01	2446	-	-	12/7/12	11/15/13	Contig	Beijing Genomics Institute	SAMN02403054	GCA_000324385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/324/385/GCA_000324385.1_ASM32438v1	23271803	CMCC84038
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.67206	30.3	-	CURS01	13	1759	1657	3/31/15	3/18/17	Contig	SC	SAMEA1010383	GCA_001228245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/245/GCA_001228245.1_7092_1_75	-	OXC6522
Fusobacterium nucleatum subsp. vincentii ChDC F8	1307427	PRJNA270144	270144	Fusobacteria	Fusobacteriia	2.03853	27.1	chromosome:CP012714.1	-	1	1912	1826	9/22/15	9/22/15	Complete Genome	Chosun University	SAMN03263151	GCA_001296125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/125/GCA_001296125.1_ASM129612v1	-	KCOM 1231
Staphylococcus aureus M0844	1158700	PRJNA88699	88699	Terrabacteria group	Firmicutes	2.88409	32.9	-	AIXT01	4	3020	2859	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809040	GCA_000362085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/085/GCA_000362085.1_Stap_aure_M0844_V1	-	M0844
Staphylococcus aureus M0871	1213729	PRJNA171273	171273	Terrabacteria group	Firmicutes	2.88301	33	-	AOAH01	10	2996	2822	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN01047812	GCA_000362105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/105/GCA_000362105.1_Stap_aure_M0871_V1	-	M0871
Fusobacterium nucleatum subsp. vincentii 3_1_36A2	469604	PRJNA38357	38357	Fusobacteria	Fusobacteriia	2.26827	27.1	chromosome:NC_022196.1/CP003700.1	-	1	2217	2074	8/27/13	4/1/17	Complete Genome	Broad Institute	SAMN02463738	GCA_000162235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/162/235/GCA_000162235.2_ASM16223v2	-	3_1_36A2
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.75243	30.3	-	CUVI01	14	1863	1749	3/31/15	3/18/17	Contig	SC	SAMEA1400875	GCA_001228425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/425/GCA_001228425.1_7213_3_78	-	OXC6623
Yersinia pestis G3768	649715	PRJNA38305	38305	Proteobacteria	Gammaproteobacteria	4.52349	47.6	-	AOMZ01	252	-	-	4/25/13	11/15/13	Contig	US Army Edgewood Chemical Biological Center	SAMN01902220	GCA_000382525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/382/525/GCA_000382525.1_Yersinia_pestis_G3768_assembly	23521061	G3768
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.12484	37.9	-	JOZM01	31	3186	3061	7/15/14	2/26/17	Contig	Cornell University	SAMN02741547	GCA_000727725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/725/GCA_000727725.1_ASM72772v1	-	FSL R8-6603
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.50458	35.2	-	MIFC01	89	5921	5549	12/13/16	3/28/17	Scaffold	"OARSA, CFSAN"	SAMN05415756	GCA_001901905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/905/GCA_001901905.1_ASM190190v1	-	MOD1_Bc112
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.45686	32	-	JVIO01	79	2385	2272	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197592	GCA_001072775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/775/GCA_001072775.1_ASM107277v1	26230489	402_SEPI
Mycobacterium tuberculosis TKK_03_0037	1448398	PRJNA235403	235403	Terrabacteria group	Actinobacteria	4.42056	65.5	-	JJZY01	6	4280	4083	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585893	GCA_000651475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/475/GCA_000651475.1_Myco_tube_TKK_03_0037_V1	-	TKK_03_0037
Arcobacter butzleri 7h1h	1036172	PRJNA67167	67167	Proteobacteria	delta/epsilon subdivisions	2.25323	27.1	chromosome:NC_021878.1/CP006615.1	-	1	2266	2176	7/24/13	4/1/17	Complete Genome	University of Liverpool	SAMN02604193	GCA_000215345.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/345/GCA_000215345.3_ASM21534v3	"2,340,512,623,969,050"	7h1h
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.03894	39.8	-	CLUV01	68	2224	2026	3/21/15	3/11/17	Contig	SC	SAMEA1025921	GCA_001085825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/825/GCA_001085825.1_6983_2_6	-	SMRU2214
Helicobacter pylori UM045	1287065	PRJNA187438	187438	Proteobacteria	delta/epsilon subdivisions	1.59421	39	-	AONO01	59	1565	1417	5/24/13	3/24/17	Contig	University of Hyderabad	SAMN02471801	GCA_000401395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/395/GCA_000401395.1_HelPylUM045_1.0	-	UM045
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05604	52	-	CHAT01	155	2321	2061	4/21/15	3/21/17	Contig	SC	SAMEA1031690	GCA_001349215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/215/GCA_001349215.1_6714_2_19	-	NM1938
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.74383	38.3	-	LRGI01	14	1734	1628	5/6/16	3/28/17	Scaffold	Menzies School of Health Research	SAMN03988121	GCA_001638385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/385/GCA_001638385.1_ASM163838v1	-	SST1023-1
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.92407	65.8	-	JTMY01	128	6733	6481	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105745	GCA_000793135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/135/GCA_000793135.1_AZPAE15048	25367914	AZPAE15048
Acinetobacter baumannii TG27307	1315173	PRJNA196292	196292	Proteobacteria	Gammaproteobacteria	4.48025	38.9	-	ASGC01	194	4467	4229	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055533	GCA_000453305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/305/GCA_000453305.1_ASM45330v1	-	TG27307
Streptococcus agalactiae	1311	PRJEB7452	269532	Terrabacteria group	Firmicutes	2.05626	35.3	-	CDEP01	65	2087	2010	12/5/14	3/16/17	Contig	INSTITUT PASTEUR	SAMEA2803883	GCA_000825965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/965/GCA_000825965.1_Bangui-IP-59	-	Bangui-IP-59
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.23115	41	-	CZDU01	58	2254	2086	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595205	GCA_900009285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/285/GCA_900009285.1_assembly_9501632	-	-
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.34942	38.3	-	FJCU01	28	3055	2944	2/20/16	3/27/17	Contig	SC	SAMEA2064213	GCA_900060705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/705/GCA_900060705.1_10771_3_11	-	2531STDY5467388
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.71791	50.7	-	CXKV01	388	5312	4544	7/16/15	2/24/17	Scaffold	SC	SAMEA2003988	GCA_001250275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/275/GCA_001250275.1_8290_4_55	-	109305
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.9753	68.3	-	LWWO01	240	7270	6701	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208604	GCA_001977565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/565/GCA_001977565.1_ASM197756v1	-	RF61-BP2
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.05356	47.5	-	LGON01	95	3855	3710	7/24/15	3/26/17	Contig	University of maryland	SAMN03839373	GCA_001187025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/025/GCA_001187025.1_ASM118702v1	-	NHCM-037
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.09537	29	-	MOQG01	346	3732	3541	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710870	GCA_002301325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/325/GCA_002301325.1_ASM230132v1	-	5555-DH/ST42
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.12728	45.2	-	JNTJ02	37	4912	4737	6/13/14	3/20/17	Contig	FDA/CFSAN	SAMN02741388	GCA_000707785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/785/GCA_000707785.2_ASM70778v2	"2,510,376,426,994,080"	CFSAN007452
Klebsiella pneumoniae CHS 75	1438779	PRJNA234244	234244	Proteobacteria	Gammaproteobacteria	5.90154	56.9	-	JMYS01	14	5950	5668	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581377	GCA_000694375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/375/GCA_000694375.1_Kleb_pneu_CHS_75_V1	-	CHS 75
Enterococcus faecalis EnGen0411	1391481	PRJNA217014	217014	Terrabacteria group	Firmicutes	2.91171	37.6	-	JAHQ01	6	2997	2831	1/13/14	3/24/17	Scaffold	Broad Institute	SAMN02333887	GCA_000519645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/645/GCA_000519645.1_Ente_faec_B318_V1	-	EnGen0411
Neisseria gonorrhoeae	485	PRJNA275092	275092	Proteobacteria	Betaproteobacteria	2.10884	52.6	-	NAGI01	105	2468	2147	4/6/17	4/11/17	Contig	Trinity College Dublin	SAMN03339564	GCA_002080715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/715/GCA_002080715.1_ASM208071v1	-	NGSJH2
Enterococcus faecium	1352	PRJNA283249	283249	Terrabacteria group	Firmicutes	2.63069	38.2	-	LDNI01	65	2671	2451	6/10/15	3/26/17	Contig	Seoul National University	SAMN03610569	GCA_001025375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/375/GCA_001025375.1_ASM102537v1	27070419	KACC16097
Arcobacter butzleri ED-1	944546	PRJDA61719	61719	Proteobacteria	delta/epsilon subdivisions	2.25667	27.1	chromosome:NC_017187.1/AP012047.1	-	1	2222	2145	9/3/11	3/30/17	Complete Genome	"Center for Computational and Quantitative Life Science, RIKEN"	SAMD00060980	GCA_000284355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/355/GCA_000284355.1_ASM28435v1	22038970	-
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.01086	60.2	-	FCIO01	19	4723	4573	1/21/16	3/27/17	Scaffold	SC	SAMEA2273965	GCA_001540765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/765/GCA_001540765.1_12082_2_96	-	2880STDY5682892
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65736	31.4	-	FBOQ01	27	1694	1612	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683410	GCA_001489855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/855/GCA_001489855.1_H051080182	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.76931	55.6	-	FJZK01	23	4616	4432	4/5/16	3/28/17	Scaffold	SC	SAMEA2273376	GCA_900075845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/845/GCA_900075845.1_11983_6_56	-	e1547
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21347	64	-	FVJW01	13	5260	5155	3/10/17	3/18/17	Contig	SC	SAMEA2069133	GCA_900134695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/695/GCA_900134695.1_10208_3_1	-	426
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.06773	54.6	-	BEFM01	119	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089492	GCA_002334205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/205/GCA_002334205.1_ASM233420v1	-	TUM10699
Pseudomonas sp. C9	1311337	PRJNA352581	352581	Proteobacteria	Gammaproteobacteria	6.35016	58.9	-	MPAK01	7	5895	5686	2/15/17	4/17/17	Scaffold	AgResearch	SAMN05989264	GCA_002000165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/165/GCA_002000165.1_C9	-	C9
Streptomyces sp. DvalAA-19	1839761	PRJEB14565	326635	Terrabacteria group	Actinobacteria	8.06188	72.1	-	FMCC01	253	6978	6475	8/12/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04883095	GCA_900091865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/865/GCA_900091865.1_IMG-taxon_2657245711_annotated_assembly	-	DvalAA-19
Streptomyces sp. BpilaLS-43	1839778	PRJEB14560	326641	Terrabacteria group	Actinobacteria	7.38597	71.7	-	FMCB01	336	6818	6058	8/12/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04883160	GCA_900091875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/875/GCA_900091875.1_IMG-taxon_2657245706_annotated_assembly	-	BpilaLS-43
Pseudomonas sp. Ep R1	1960920	PRJNA291470	291470	Proteobacteria	Gammaproteobacteria	6.79709	60.6	-	MWTQ01	158	6146	5894	3/14/17	3/16/17	Scaffold	University of Florence	SAMN06345440	GCA_002027095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/095/GCA_002027095.1_ASM202709v1	-	Ep R1
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.45103	54.9	-	BEFN01	285	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089493	GCA_002334225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/225/GCA_002334225.1_ASM233422v1	-	TUM10887
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.04866	64.2	-	FSFJ01	41	5045	4900	12/14/16	3/21/17	Contig	SC	SAMEA2069136	GCA_900134705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/705/GCA_900134705.1_10208_3_10	-	435
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.44159	55.4	-	FJZP01	84	5580	5287	4/5/16	3/28/17	Scaffold	SC	SAMEA2273379	GCA_900075855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/855/GCA_900075855.1_11983_6_59	-	e1556
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.78932	31.2	-	FBIH01	43	1875	1785	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683280	GCA_001489915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/915/GCA_001489915.1_BRIS1041X	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.23376	60	-	FCLM01	24	5002	4833	1/21/16	3/27/17	Scaffold	SC	SAMEA2274059	GCA_001540785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/785/GCA_001540785.1_12082_3_83	-	2880STDY5682987
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.1051	67.7	chromosome:NZ_CP010347.1/CP010347.1	-	1	3971	3622	3/31/16	5/29/17	Chromosome	Centers for Disease Control and Prevention	SAMN03216665	GCA_001605705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/705/GCA_001605705.1_ASM160570v1	"2,730,373,928,167,520"	I475
Enterococcus faecium	1352	PRJNA283249	283249	Terrabacteria group	Firmicutes	2.83707	38	-	LDNJ01	105	2886	2652	6/10/15	3/26/17	Contig	Seoul National University	SAMN03610570	GCA_001025385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/385/GCA_001025385.1_ASM102538v1	27070419	KACC16100
Neisseria gonorrhoeae	485	PRJNA275092	275092	Proteobacteria	Betaproteobacteria	2.05354	52.8	-	NAGJ01	119	2394	2072	4/6/17	4/11/17	Contig	Trinity College Dublin	SAMN03339565	GCA_002080745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/745/GCA_002080745.1_ASM208074v1	-	NGSJH4
Enterococcus faecalis EnGen0412	1391482	PRJNA217015	217015	Terrabacteria group	Firmicutes	3.06507	37.3	-	JAHR01	4	3185	3023	1/13/14	3/24/17	Scaffold	Broad Institute	SAMN02333888	GCA_000519665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/665/GCA_000519665.1_Ente_faec_B319_V1	-	EnGen0412
Klebsiella pneumoniae CHS 76	1438780	PRJNA234245	234245	Proteobacteria	Gammaproteobacteria	5.93351	56.9	-	JMYT01	5	6019	5727	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581378	GCA_000694395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/395/GCA_000694395.1_Kleb_pneu_CHS_76_V1	-	CHS 76
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.12116	45.3	-	JNTI02	49	4898	4725	6/13/14	3/20/17	Contig	FDA/CFSAN	SAMN02741387	GCA_000707805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/805/GCA_000707805.2_ASM70780v2	25103764	CFSAN007451
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.15395	28.5	-	MOQH01	261	3775	3639	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710871	GCA_002301335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/335/GCA_002301335.1_ASM230133v1	-	5557-DH/ST42
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.09154	47.5	-	LGOM01	84	3924	3754	7/24/15	3/26/17	Contig	University of maryland	SAMN03839372	GCA_001187065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/065/GCA_001187065.1_ASM118706v1	-	NHCM-033
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.10264	68.2	-	LWWM01	225	7416	6816	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208602	GCA_001977575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/575/GCA_001977575.1_ASM197757v1	-	NRF60-BP3
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.67436	50.8	-	CXIO01	384	5195	4491	7/16/15	2/24/17	Scaffold	SC	SAMEA2004848	GCA_001250295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/295/GCA_001250295.1_8289_7_74	-	85674
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.57745	38.3	-	FJCZ01	33	3283	3124	2/20/16	3/27/17	Contig	SC	SAMEA2058476	GCA_900060715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/715/GCA_900060715.1_10771_1_85	-	2531STDY5467366
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.09442	41.1	-	CZEV01	67	2082	1942	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595196	GCA_900009295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/295/GCA_900009295.1_assembly_2032008	-	-
Streptococcus agalactiae	1311	PRJEB7452	269532	Terrabacteria group	Firmicutes	2.02444	35.3	-	CDEQ01	52	2072	2008	12/5/14	3/16/17	Contig	INSTITUT PASTEUR	SAMEA2803884	GCA_000825985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/985/GCA_000825985.1_Bangui-IP-105	-	Bangui-IP-105
Acinetobacter baumannii TG27311	1315174	PRJNA196293	196293	Proteobacteria	Gammaproteobacteria	4.40273	38.8	-	ASGD01	169	4390	4162	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055534	GCA_000453325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/325/GCA_000453325.1_ASM45332v1	-	TG27311
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.28751	66.5	-	JTMQ01	90	5968	5771	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105753	GCA_000793165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/165/GCA_000793165.1_AZPAE15056	25367914	AZPAE15056
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.76843	38.4	-	LRGJ01	26	1802	1711	5/6/16	3/28/17	Scaffold	Menzies School of Health Research	SAMN03988123	GCA_001638405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/405/GCA_001638405.1_ASM163840v1	-	SST1024-1
Neisseria meningitidis	487	PRJNA260447	260447	Proteobacteria	Betaproteobacteria	2.25841	51.5	-	JRFG01	13	2659	2258	10/22/15	3/21/17	Contig	University of Pittsburgh	SAMN03022904	GCA_001407225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/225/GCA_001407225.1_ASM140722v1	-	M20599
Helicobacter pylori HPARG8G	1333704	PRJEB1920	210357	Proteobacteria	delta/epsilon subdivisions	1.60223	39	-	CBKZ01	47	1577	1421	7/2/13	3/24/17	Contig	IMPAM	SAMEA2272011	GCA_000438475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/475/GCA_000438475.1_HP8GU	-	HPARG8G
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.05544	39.7	-	CMSH01	54	2241	1994	3/23/15	3/11/17	Contig	SC	SAMEA2061959	GCA_001085845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/845/GCA_001085845.1_9803_8_67	-	type strain: N
Mycoplasma hominis ATCC 23114	347256	PRJEA53147	53147	Terrabacteria group	Tenericutes	0.665445	27.1	chromosome:NC_013511.1/FP236530.1	-	1	599	549	11/14/09	3/30/17	Complete Genome	Genoscope	SAMEA2272593	GCA_000085865.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/085/865/GCA_000085865.1_ASM8586v1	19816563	ATCC 23114
Mycobacterium tuberculosis TKK_03_0038	1448399	PRJNA235404	235404	Terrabacteria group	Actinobacteria	4.4305	65.5	-	JJZX01	9	4306	4121	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585894	GCA_000651495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/495/GCA_000651495.1_Myco_tube_TKK_03_0038_V1	-	TKK_03_0038
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.56168	32	-	JVIJ01	55	2545	2416	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197597	GCA_001072795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/795/GCA_001072795.1_ASM107279v1	26230489	407_SEPI
Bacillus cereus	1396	PRJNA321567	321567	Terrabacteria group	Firmicutes	5.11485	35.2	-	LZOD01	109	5481	5159	12/19/16	3/28/17	Scaffold	CSIR-Institute of Microbial Technology	SAMN04992846	GCA_001909175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/175/GCA_001909175.1_ASM190917v1	-	BC04
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.00898	37.8	-	JOZJ01	28	3075	2979	7/15/14	2/26/17	Contig	Cornell University	SAMN02741544	GCA_000727735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/735/GCA_000727735.1_ASM72773v1	-	FSL R8-6553
Yersinia pestis EV NIIEG	1455696	PRJNA234351	234351	Proteobacteria	Gammaproteobacteria	4.45793	47.4	-	JBOL01	298	4206	3256	3/12/14	3/12/14	Contig	RusRAPI	SAMN02598688	GCA_000590535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/535/GCA_000590535.1_EV_NIIEG	-	EV NIIEG
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.61662	30.4	-	CUPF01	15	1700	1571	3/31/15	3/18/17	Contig	SC	SAMEA1010566	GCA_001228445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/445/GCA_001228445.1_7092_1_16	-	OXC6463
Fusobacterium nucleatum subsp. animalis 4_8	469607	PRJNA32481	32481	Fusobacteria	Fusobacteriia	2.27546	27.0869	chromosome:NC_021281.1/CP003723.1; plasmid unnamed:NC_021277.1/CP003724.1	-	2	2211	2044	5/22/13	8/31/17	Complete Genome	Broad Institute	SAMN02603674	GCA_000400875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/875/GCA_000400875.1_ASM40087v1	-	4_8
Staphylococcus aureus M0877	1213730	PRJNA171274	171274	Terrabacteria group	Firmicutes	2.81256	32.9	-	AOAI01	7	2914	2749	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN01047813	GCA_000362125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/125/GCA_000362125.1_Stap_aure_M0877_V1	-	M0877
Staphylococcus aureus M0892	1213732	PRJNA171276	171276	Terrabacteria group	Firmicutes	2.89645	32.9	-	AOAK01	6	3035	2878	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN01047815	GCA_000362165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/165/GCA_000362165.1_Stap_aure_M0892_V1	-	M0892
Fusobacterium nucleatum subsp. vincentii 3_1_27	469602	PRJNA41563	41563	Fusobacteria	Fusobacteriia	2.19023	27.0774	chromosome 1:NZ_CP007064.1/CP007064.1; chromosome 2:NZ_CP007065.1/CP007065.1; plasmid unnamed:NZ_CP007066.1/CP007066.1	-	3	2080	1919	2/7/14	4/2/17	Complete Genome	Broad Institute	SAMN02463816	GCA_000163915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/915/GCA_000163915.2_ASM16391v2	-	3_1_27
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66278	30.4	-	CUKL01	16	1758	1663	3/31/15	3/18/17	Contig	SC	SAMEA1010289	GCA_001228525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/525/GCA_001228525.1_7038_3_76	-	OXC6326
Yersinia pestis subsp. pestis	385964	PRJNA247716	247716	Proteobacteria	Gammaproteobacteria	4.5688	47.5	-	JMUF01	298	4065	3659	7/28/14	7/28/14	Contig	"Russian Research Antiplague Institute ""Microbe"""	SAMN02777961	GCA_000734805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/734/805/GCA_000734805.1_ASM73480v1	-	231(708)
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.05548	37.9	-	JOZO01	12	3085	2987	7/15/14	2/26/17	Contig	Cornell University	SAMN02741549	GCA_000727755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/755/GCA_000727755.1_ASM72775v1	-	FSL R8-6617
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.05618	35.4	-	MIFQ01	130	5448	5173	12/21/16	3/28/17	Scaffold	"OARSA, CFSAN"	SAMN05608078	GCA_001913305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/305/GCA_001913305.1_ASM191330v1	-	MOD1_Bc89
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.56657	32	-	JVHS01	83	2551	2401	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197614	GCA_001072875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/875/GCA_001072875.1_ASM107287v1	26230489	422.rep1_SEPI
Mycobacterium tuberculosis TKK_03_0039	1448400	PRJNA235405	235405	Terrabacteria group	Actinobacteria	4.40956	65.5	-	JJZW01	4	4306	4100	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585895	GCA_000651515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/515/GCA_000651515.1_Myco_tube_TKK_03_0039_V1	-	TKK_03_0039
Brachyspira hyodysenteriae ATCC 27164	1266923	PRJNA322728	322728	Spirochaetes	Spirochaetia	3.07404	27.0512	chromosome:NZ_CP015910.2/CP015910.2; plasmid pBhyoB78:NZ_CP016085.2/CP016085.2	-	2	2686	2607	6/27/16	4/19/17	Complete Genome	University of Minnesota	SAMN05172954	GCA_001676785.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/785/GCA_001676785.2_ASM167678v2	-	B-78
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06319	39.5	-	CNYF02	176	2216	2022	3/23/15	3/11/17	Contig	SC	SAMEA1463180	GCA_001085965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/965/GCA_001085965.2_7553_4_23	-	ND6147
Helicobacter pylori HPARG63	1338534	PRJEB1889	210157	Proteobacteria	delta/epsilon subdivisions	1.66868	38.8	-	CBKY01	34	1638	1486	6/30/13	3/24/17	Contig	IMPAM	SAMEA2272629	GCA_000438495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/495/GCA_000438495.1_HP63C	-	HPARG63
Neisseria meningitidis	487	PRJNA260449	260449	Proteobacteria	Betaproteobacteria	2.11037	51.8	-	JRFH01	320	2441	2086	10/22/15	3/21/17	Contig	University of Pittsburgh	SAMN03022905	GCA_001407245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/245/GCA_001407245.1_ASM140724v1	-	M1412
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.79136	38.3	-	LRGK01	21	1797	1712	5/6/16	3/28/17	Scaffold	Menzies School of Health Research	SAMN03988118	GCA_001638435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/435/GCA_001638435.1_ASM163843v1	-	SST1028-1
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.36059	66.4	-	JTMR01	70	5990	5836	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105752	GCA_000793185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/185/GCA_000793185.1_AZPAE15055	25367914	AZPAE15055
Acinetobacter baumannii TG27315	1315175	PRJNA196294	196294	Proteobacteria	Gammaproteobacteria	4.0895	38.9	-	ASGE01	87	4013	3829	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055535	GCA_000453345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/345/GCA_000453345.1_ASM45334v1	-	TG27315
Streptococcus agalactiae	1311	PRJEB7452	269532	Terrabacteria group	Firmicutes	2.0097	35.3	-	CDEO01	99	2049	1956	12/5/14	3/16/17	Contig	INSTITUT PASTEUR	SAMEA2803885	GCA_000826005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/005/GCA_000826005.1_CCH210145919	-	CCH210145919
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.2525	41.1	-	CZEL01	78	2301	2119	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595176	GCA_900009305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/305/GCA_900009305.1_assembly_8067	-	-
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.36923	38.2	-	FJDN01	39	3086	2941	2/20/16	3/27/17	Contig	SC	SAMEA2060129	GCA_900060735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/735/GCA_900060735.1_10771_1_89	-	2531STDY5467370
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.69868	50.8	-	CXJG01	380	5316	4533	7/16/15	2/24/17	Scaffold	SC	SAMEA2004853	GCA_001250315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/315/GCA_001250315.1_8289_7_89	-	87036
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.0241	68.3	-	LWWQ01	225	7314	6738	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208606	GCA_001977605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/605/GCA_001977605.1_ASM197760v1	-	RF63-BP1
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.05481	47.5	-	LGOO01	172	3832	3707	7/24/15	3/26/17	Contig	University of maryland	SAMN03839374	GCA_001187085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/085/GCA_001187085.1_ASM118708v1	-	NHCM-043
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.16003	28.9	-	MOQJ01	101	3793	3652	9/14/17	9/18/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710873	GCA_002301375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/375/GCA_002301375.1_ASM230137v1	-	5559-DH/ST42
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.12476	45.2	-	JNTK02	46	4906	4731	6/13/14	3/20/17	Contig	FDA/CFSAN	SAMN02741389	GCA_000707825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/825/GCA_000707825.2_ASM70782v2	"2,510,376,426,994,080"	CFSAN007453
Klebsiella pneumoniae CHS 80	1438781	PRJNA234249	234249	Proteobacteria	Gammaproteobacteria	5.91396	56.9	-	JMYU01	5	5985	5706	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581382	GCA_000694415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/415/GCA_000694415.1_Kleb_pneu_CHS_80_V1	-	CHS 80
Enterococcus faecalis EnGen0413	1391483	PRJNA217016	217016	Terrabacteria group	Firmicutes	2.77793	37.7	-	JAHS01	5	2766	2634	1/13/14	3/24/17	Scaffold	Broad Institute	SAMN02333889	GCA_000519685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/685/GCA_000519685.1_Ente_faec_B320_V1	-	EnGen0413
Neisseria gonorrhoeae	485	PRJNA275092	275092	Proteobacteria	Betaproteobacteria	2.09707	52.7	-	NAGK01	147	2421	2086	4/6/17	4/10/17	Contig	Trinity College Dublin	SAMN03339566	GCA_002080775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/775/GCA_002080775.1_ASM208077v1	-	NGSJH5
Enterococcus faecium	1352	PRJNA283249	283249	Terrabacteria group	Firmicutes	2.67365	38	-	LDNK01	80	2715	2482	6/10/15	3/26/17	Contig	Seoul National University	SAMN03610571	GCA_001025405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/405/GCA_001025405.1_ASM102540v1	27070419	KACC16106
Bordetella pertussis	520	PRJNA279196	279196	Proteobacteria	Betaproteobacteria	4.10642	67.7	chromosome:NZ_CP011180.1/CP011180.1	-	1	3967	3623	2/6/17	3/29/17	Chromosome	Centers for Disease Control and Prevention	SAMN03455344	GCA_001985185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/985/185/GCA_001985185.1_ASM198518v1	28167525	F684
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.01077	60.2	-	FCFN01	16	4735	4567	1/21/16	3/27/17	Scaffold	SC	SAMEA2273910	GCA_001540805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/805/GCA_001540805.1_12082_2_45	-	2880STDY5682837
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.7767	31.2	-	FBEX01	43	1863	1762	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683186	GCA_001489935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/935/GCA_001489935.1_SS_2276	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.91334	55.4	-	FJZL01	36	4783	4575	4/5/16	3/28/17	Scaffold	SC	SAMEA2273378	GCA_900075865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/865/GCA_900075865.1_11983_6_58	-	e1554
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21143	64.2	-	FVJX01	37	5269	5101	3/10/17	3/18/17	Contig	SC	SAMEA2071552	GCA_900134725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/725/GCA_900134725.1_10208_3_14	-	439
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.10748	54.6	-	BEFO01	130	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089494	GCA_002334245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/245/GCA_002334245.1_ASM233424v1	-	TUM11041
Pseudomonas sp. R5(2017)	1981675	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.20994	64.8	-	NEHE01	55	5596	5456	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771399	GCA_002112255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/255/GCA_002112255.1_ASM211225v1	-	R5(2017)
Streptomyces sp. ScaeMP-6W	1839779	PRJEB14558	326647	Terrabacteria group	Actinobacteria	7.16343	73.3	-	FMBX01	157	6298	5933	8/12/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04883166	GCA_900091885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/885/GCA_900091885.1_IMG-taxon_2657245704_annotated_assembly	-	ScaeMP-6W
Streptomyces sp. Ncost-T10-10d	1839774	PRJEB14574	326627	Terrabacteria group	Actinobacteria	9.3611	69.6	-	FMDF01	244	8517	7622	8/15/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04883155	GCA_900091955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/955/GCA_900091955.1_IMG-taxon_2657245721_annotated_assembly	-	Ncost-T10-10d
Pseudomonas sp. R4(2017)	1981676	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.77943	64.7	-	NEHF01	93	6129	5932	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771398	GCA_002112285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/285/GCA_002112285.1_ASM211228v1	-	R4(2017)
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.07451	54.6	-	BEFP01	122	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089495	GCA_002334265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/265/GCA_002334265.1_ASM233426v1	-	TUM11042
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23772	64.1	-	FVJZ01	36	5264	5105	3/10/17	3/18/17	Contig	SC	SAMEA2070894	GCA_900134735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/735/GCA_900134735.1_10208_3_15	-	440
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.90395	55	-	FJZM01	65	4830	4591	4/5/16	3/28/17	Scaffold	SC	SAMEA2273380	GCA_900075875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/875/GCA_900075875.1_11983_6_60	-	e1562
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68953	31.4	-	FBPE01	41	1758	1669	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683460	GCA_001489955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/955/GCA_001489955.1_H125000370	-	n/a
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.40274	59.6	-	FCKI01	28	5129	4969	1/21/16	3/27/17	Scaffold	SC	SAMEA2274029	GCA_001540825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/825/GCA_001540825.1_12082_3_54	-	2880STDY5682957
Bordetella pertussis B0558	743273	PRJNA46269	46269	Proteobacteria	Betaproteobacteria	3.81212	68	-	ADKR01	448	3739	3290	11/9/10	3/23/17	Contig	RIVM	SAMN02470861	GCA_000193515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/515/GCA_000193515.2_ASM19351v2	21070624	B0558
Enterococcus faecium	1352	PRJNA283249	283249	Terrabacteria group	Firmicutes	2.78143	38	-	LDND01	147	2879	2627	6/10/15	3/26/17	Contig	Seoul National University	SAMN03610564	GCA_001025435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/435/GCA_001025435.1_ASM102543v1	27070419	KACC15711
Neisseria gonorrhoeae	485	PRJNA275092	275092	Proteobacteria	Betaproteobacteria	2.07538	52.7	-	NAGL01	120	2427	2092	4/6/17	4/10/17	Contig	Trinity College Dublin	SAMN03339567	GCA_002080785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/785/GCA_002080785.1_ASM208078v1	-	NGSJH7
Enterococcus faecalis EnGen0414	1391484	PRJNA217017	217017	Terrabacteria group	Firmicutes	2.73352	37.6	-	JAHT01	4	2735	2612	1/13/14	3/24/17	Scaffold	Broad Institute	SAMN02333890	GCA_000519705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/705/GCA_000519705.1_Ente_faec_B321_V1	-	EnGen0414
Klebsiella pneumoniae MGH 51	1438782	PRJNA234250	234250	Proteobacteria	Gammaproteobacteria	5.77228	57	-	JMYV01	10	5887	5610	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581383	GCA_000694435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/435/GCA_000694435.1_Kleb_pneu_MGH_51_V1	-	MGH 51
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.09139	45.3	-	JNTO02	63	4912	4697	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741361	GCA_000707845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/845/GCA_000707845.2_ASM70784v2	"2,510,376,428,330,880"	CFSAN006132
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.38948	29.6	-	MOPS01	526	3925	3728	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710856	GCA_002301395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/395/GCA_002301395.1_ASM230139v1	-	5505-Y/ST2
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.03687	47.5	-	LGOQ01	98	3836	3683	7/24/15	3/26/17	Contig	University of maryland	SAMN03839376	GCA_001187095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/095/GCA_001187095.1_ASM118709v1	-	NHCM-045
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.13869	68.1	-	LWWR01	421	7424	6733	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208607	GCA_001977615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/615/GCA_001977615.1_ASM197761v1	-	RF63-BP2
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.55269	50.5	-	CXEG01	393	4893	4330	7/16/15	2/24/17	Scaffold	SC	SAMEA954599	GCA_001250375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/375/GCA_001250375.1_5417_2_3	-	20021122_1361394
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.42971	38.3	-	FJDM01	48	3127	2988	2/20/16	3/27/17	Contig	SC	SAMEA2064217	GCA_900060745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/745/GCA_900060745.1_10771_3_23	-	2531STDY5467400
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.32248	41.1	-	CZEX01	68	2396	2237	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595213	GCA_900009315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/315/GCA_900009315.1_assembly_GD-0007	-	-
Streptococcus agalactiae	1311	PRJEB7452	269532	Terrabacteria group	Firmicutes	2.04834	35.2	-	CCYF01	70	2080	2006	12/5/14	3/16/17	Contig	INSTITUT PASTEUR	SAMEA2803886	GCA_000826025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/025/GCA_000826025.1_Madagascar-IP-47	-	Madagascar-IP-47
Acinetobacter baumannii TG27319	1315176	PRJNA196295	196295	Proteobacteria	Gammaproteobacteria	4.0757	38.9	-	ASGF01	84	3974	3801	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055536	GCA_000453365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/365/GCA_000453365.1_ASM45336v1	-	TG27319
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.4513	66.4	-	JTMP01	85	6211	6024	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105754	GCA_000793205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/205/GCA_000793205.1_AZPAE15057	25367914	AZPAE15057
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.74741	38.3	-	LRGS01	17	1729	1627	5/6/16	3/28/17	Scaffold	Menzies School of Health Research	SAMN03988126	GCA_001638485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/485/GCA_001638485.1_ASM163848v1	-	SST2096-1
Neisseria meningitidis	487	PRJNA318853	318853	Proteobacteria	Betaproteobacteria	2.11359	51.7	-	LWLO01	177	2452	2093	4/25/16	3/21/17	Contig	"National Laboratory of Health, Environment and Food"	SAMN04606885	GCA_001630495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/630/495/GCA_001630495.1_ASM163049v1	-	87Mo
Helicobacter pylori wls-5-3	1350462	PRJNA209467	209467	Proteobacteria	delta/epsilon subdivisions	1.65388	38.7	-	AUPD01	91	1622	1486	8/6/13	3/24/17	Contig	"Beijing institution of Radiation Medicine, Beijing, China"	SAMN02230044	GCA_000444175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/175/GCA_000444175.1_wls-5-3	-	wls-5-3
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12699	39.5	-	COEU02	189	2343	2105	3/22/15	3/11/17	Contig	SC	SAMEA1463004	GCA_001086005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/005/GCA_001086005.2_7622_5_62	-	MD5103
Brachyspira hyodysenteriae WA1	565034	PRJNA31263	31263	Spirochaetes	Spirochaetia	3.03663	27.0373	chromosome:NC_012225.1/CP001357.1; plasmid pBHWA1:NC_012226.1/CP001360.1	-	2	2637	2547	3/18/09	3/30/17	Complete Genome	Centre for Comparative Genomics	SAMN02603102	GCA_000022105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/105/GCA_000022105.1_ASM2210v1	19262690	WA1; ATCC 49526
Mycobacterium tuberculosis TKK_03_0040	1448401	PRJNA235406	235406	Terrabacteria group	Actinobacteria	4.42156	65.6	-	JJZV01	5	4294	4105	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585896	GCA_000651535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/535/GCA_000651535.1_Myco_tube_TKK_03_0040_V1	-	TKK_03_0040
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.57065	32	-	JVHR01	88	2548	2402	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197615	GCA_001072885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/885/GCA_001072885.1_ASM107288v1	26230489	422.rep2_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.36904	35.2	-	MIFO01	52	5788	5464	12/21/16	3/28/17	Scaffold	"OARSA, CFSAN"	SAMN05608083	GCA_001913315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/315/GCA_001913315.1_ASM191331v1	-	MOD1_Bc80
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.10964	37.7	-	JOZK01	28	3210	3106	7/15/14	2/26/17	Contig	Cornell University	SAMN02741545	GCA_000727765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/765/GCA_000727765.1_ASM72776v1	-	FSL R8-6557
Yersinia pestis	632	PRJNA305705	305705	Proteobacteria	Gammaproteobacteria	4.5526	47.6	-	LPQY01	402	4155	2158	2/11/16	2/11/16	Contig	Russian Research Anti-Plague Institute 'Microbe'	SAMN04331740	GCA_001559935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/935/GCA_001559935.1_ASM155993v1	-	KM918
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64397	30.4	-	CURB01	14	1733	1625	3/31/15	3/18/17	Contig	SC	SAMEA1010655	GCA_001228545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/545/GCA_001228545.1_7092_1_59	-	OXC6506
Mesoplasma chauliocola	216427	PRJNA400791	400791	Terrabacteria group	Tenericutes	0.85478	27	chromosome:NZ_CP023173.1/CP023173.1	-	1	769	718	9/12/17	9/14/17	Complete Genome	Ginkgo Bioworks Inc.	SAMN07573570	GCA_002290085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/085/GCA_002290085.1_ASM229008v1	-	CHPA-2
Staphylococcus aureus M0900	1213733	PRJNA171277	171277	Terrabacteria group	Firmicutes	2.89813	32.9	-	AOAL01	12	3054	2883	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN01047816	GCA_000362185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/185/GCA_000362185.1_Stap_aure_M0900_V1	-	M0900
Staphylococcus aureus M0927	1213734	PRJNA171278	171278	Terrabacteria group	Firmicutes	2.873	32.8	-	AOAM01	12	3019	2858	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN01047817	GCA_000362205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/205/GCA_000362205.1_Stap_aure_M0927_V1	-	M0927
Fusobacterium nucleatum subsp. animalis	76859	PRJNA386737	386737	Fusobacteria	Fusobacteriia	2.3229	27	chromosome:CP022124.1	-	1	2270	2106	6/30/17	6/30/17	Complete Genome	Chosun University	SAMN07125863	GCA_002211645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/645/GCA_002211645.1_ASM221164v1	-	ChDC F332
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66628	30.4	-	CTRT01	17	1758	1655	3/31/15	3/18/17	Contig	SC	SAMEA1401545	GCA_001228565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/565/GCA_001228565.1_7213_3_91	-	OXC6636
Yersinia pestis	632	PRJNA305573	305573	Proteobacteria	Gammaproteobacteria	4.5696	47.5	-	LOHR01	292	4188	3715	3/21/16	3/21/16	Contig	Russian Research Anti-Plague Institute 'Microbe'	SAMN04329024	GCA_001595585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/585/GCA_001595585.1_ASM159558v1	-	M-1864
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	2.95008	37.9	-	JOZN01	19	2996	2910	7/15/14	2/26/17	Contig	Cornell University	SAMN02741548	GCA_000727805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/805/GCA_000727805.1_ASM72780v1	-	FSL R8-6607
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.47106	35.1	-	MIFS01	71	5930	5539	12/21/16	3/28/17	Scaffold	"OARSA, CFSAN"	SAMN05415282	GCA_001913325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/325/GCA_001913325.1_ASM191332v1	-	MOD1_Bc69
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.62677	32	-	JVHA01	94	2632	2476	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197632	GCA_001072995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/995/GCA_001072995.1_ASM107299v1	26230489	439_SEPI
Mycobacterium tuberculosis TKK_03_0042	1448402	PRJNA235407	235407	Terrabacteria group	Actinobacteria	4.40904	65.6	-	JJZU01	2	4282	4103	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585897	GCA_000651555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/555/GCA_000651555.1_Myco_tube_TKK_03_0042_V1	-	TKK_03_0042
Fusobacterium nucleatum subsp. nucleatum	76856	PRJNA270140	270140	Fusobacteria	Fusobacteriia	2.2904	27	chromosome:CP012717.1	-	1	2196	2077	9/22/15	9/22/15	Complete Genome	Chosun University	SAMN03263147	GCA_001296185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/185/GCA_001296185.1_ASM129618v1	-	KCOM 1250
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1208	39.6	-	CKUG01	57	2287	2074	3/21/15	3/11/17	Contig	SC	SAMEA1025732	GCA_001086085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/085/GCA_001086085.1_6823_2_8	-	SMRU1880
Helicobacter pylori wls-5-12	1355023	PRJNA210821	210821	Proteobacteria	delta/epsilon subdivisions	1.57718	38.8	-	AUPY01	64	1565	1390	8/6/13	3/27/17	Contig	"Beijing institution of Radiation Medicine, Beijing, China"	SAMN02393727	GCA_000444195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/195/GCA_000444195.2_wls-5-12	-	wls-5-12
Neisseria meningitidis	487	PRJNA318734	318734	Proteobacteria	Betaproteobacteria	2.1	51.8	-	LWLL01	168	2446	2095	4/25/16	3/21/17	Contig	"National Laboratory of Health, Environment and Food"	SAMN04606884	GCA_001630505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/630/505/GCA_001630505.1_ASM163050v1	-	85Mo
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.75697	38.4	-	LRGU01	15	1765	1690	5/6/16	3/28/17	Scaffold	Menzies School of Health Research	SAMN03988141	GCA_001638545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/545/GCA_001638545.1_ASM163854v1	-	SST2098-1
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.56788	66.2	-	JTMO01	103	6255	6060	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105755	GCA_000793225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/225/GCA_000793225.1_AZPAE15058	25367914	AZPAE15058
Acinetobacter baumannii TG27371	1315177	PRJNA196296	196296	Proteobacteria	Gammaproteobacteria	4.08797	38.9	-	ASGG01	167	3962	3816	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055537	GCA_000453385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/385/GCA_000453385.1_ASM45338v1	-	TG27371
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.06991	35.5	-	LCTR01	38	2134	1989	5/19/15	3/17/17	Contig	Novartis Vaccines	SAMN03435033	GCA_001010325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/325/GCA_001010325.1_ASM101032v1	25946017	DK-PW-162
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.03887	41.2	-	CZEA01	39	2049	1942	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595207	GCA_900009565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/565/GCA_900009565.1_assembly_C160	-	-
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.35004	38.3	-	FJGR01	23	3058	2948	2/20/16	3/27/17	Contig	SC	SAMEA1972840	GCA_900060755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/755/GCA_900060755.1_10625_2_22	-	2532STDY5467495
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.81717	50.7	-	CXJY01	504	5473	4636	7/16/15	2/24/17	Scaffold	SC	SAMEA2003907	GCA_001250395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/395/GCA_001250395.1_8290_4_16	-	95529
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.02607	68.3	-	LWWS01	329	7376	6721	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208608	GCA_001977645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/645/GCA_001977645.1_ASM197764v1	-	RF67-BP1
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.05602	47.5	-	LGOT01	78	3894	3715	7/24/15	3/26/17	Contig	University of maryland	SAMN03839379	GCA_001187105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/105/GCA_001187105.1_ASM118710v1	-	NHCM-053
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.24022	28.7	-	MOPT01	77	3933	3769	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710857	GCA_002301405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/405/GCA_002301405.1_ASM230140v1	-	5537-D/ST9
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.09087	45.3	-	JNTP02	52	4906	4691	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741362	GCA_000707865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/865/GCA_000707865.2_ASM70786v2	"2,510,376,428,330,880"	CFSAN006133
Klebsiella pneumoniae MGH 52	1438783	PRJNA234251	234251	Proteobacteria	Gammaproteobacteria	5.51592	57	-	JMYW01	22	5483	5212	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581384	GCA_000694455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/455/GCA_000694455.1_Kleb_pneu_MGH_52_V1	-	MGH 52
Enterococcus faecalis EnGen0415	1391485	PRJNA217018	217018	Terrabacteria group	Firmicutes	3.10143	37.4	-	JAHU01	7	3230	3061	1/13/14	3/24/17	Scaffold	Broad Institute	SAMN02333891	GCA_000519725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/725/GCA_000519725.1_Ente_faec_B324_V1	-	EnGen0415
Neisseria gonorrhoeae	485	PRJNA275092	275092	Proteobacteria	Betaproteobacteria	2.12029	52.5	-	NAGN01	122	2457	2141	4/6/17	4/11/17	Contig	Trinity College Dublin	SAMN03339569	GCA_002080815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/815/GCA_002080815.1_ASM208081v1	-	NGSJH9
Enterococcus faecium	1352	PRJNA280938	280938	Terrabacteria group	Firmicutes	2.72252	38.1	-	LAXK01	70	2823	2541	6/25/15	3/26/17	Contig	Universidad Complutense de Madrid	SAMN03481071	GCA_001039515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/515/GCA_001039515.1_ASM103951v1	27013035	M3K31
Bordetella pertussis B1193	743274	PRJNA46271	46271	Proteobacteria	Betaproteobacteria	3.81394	68	-	ADKS01	404	3723	3308	11/9/10	3/23/17	Contig	RIVM	SAMN02470862	GCA_000193535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/535/GCA_000193535.2_ASM19353v2	21070624	B1193
Serratia marcescens	615	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.25377	60.1	-	FCLK01	19	5053	4886	1/21/16	3/27/17	Scaffold	SC	SAMEA2274057	GCA_001564475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/475/GCA_001564475.1_12082_3_81	-	2880STDY5682985
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.56559	31.9	-	FBNO01	21	1560	1503	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683446	GCA_001489995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/995/GCA_001489995.1_H071960681	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.96574	54.7	-	FJZN01	56	4887	4662	4/5/16	3/28/17	Scaffold	SC	SAMEA2273381	GCA_900075885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/885/GCA_900075885.1_11983_6_61	-	e1563
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.04786	64.2	-	FSFH01	37	5040	4898	12/14/16	3/21/17	Contig	SC	SAMEA2070893	GCA_900134745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/745/GCA_900134745.1_10208_3_12	-	437
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.11171	54.6	-	BEFQ01	85	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089496	GCA_002334285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/285/GCA_002334285.1_ASM233428v1	-	TUM11043
Pseudomonas sp. R43(2017)	1981680	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.41348	60.6	-	NEHJ01	19	5876	5734	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771394	GCA_002112345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/345/GCA_002112345.1_ASM211234v1	-	R43(2017)
Streptomyces sp. LamerLS-31b	1839765	PRJEB14576	326625	Terrabacteria group	Actinobacteria	8.51668	71.6	-	FMDH01	242	7753	7118	8/15/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04883142	GCA_900091975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/975/GCA_900091975.1_IMG-taxon_2657245725_annotated_assembly	-	LamerLS-31b
Streptomyces sp. DconLS	1839766	PRJEB14575	326628	Terrabacteria group	Actinobacteria	8.5686	71.5	-	FMDI01	420	8005	6749	8/15/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04883143	GCA_900091985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/985/GCA_900091985.1_IMG-taxon_2657245723_annotated_assembly	-	DconLS
Pseudomonas sp. R41(2017)	1981681	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.27068	60.3	-	NEHK01	25	5780	5627	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771393	GCA_002112365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/365/GCA_002112365.1_ASM211236v1	-	R41(2017)
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.1129	54.7	-	BEFR01	128	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089497	GCA_002334305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/305/GCA_002334305.1_ASM233430v1	-	TUM11044
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15274	64.2	-	FVKG01	63	5168	5023	3/10/17	3/18/17	Contig	SC	SAMEA2071548	GCA_900134775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/775/GCA_900134775.1_10208_3_2	-	427
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.01216	55.1	-	FJZO01	82	4975	4690	4/6/16	3/28/17	Scaffold	SC	SAMEA2273384	GCA_900075895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/895/GCA_900075895.1_11983_6_64	-	e1586
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66063	31.4	-	FBAA01	25	1720	1624	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683060	GCA_001490015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/015/GCA_001490015.1_EC3627	-	n/a
Serratia marcescens	615	PRJNA321573	321573	Proteobacteria	Gammaproteobacteria	5.07688	59.6	-	LZOB01	26	4786	4620	12/19/16	3/28/17	Scaffold	CSIR-Institute of Microbial Technology	SAMN04992845	GCA_001909165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/165/GCA_001909165.1_ASM190916v1	-	SM03
Bordetella pertussis B1831	743275	PRJNA46273	46273	Proteobacteria	Betaproteobacteria	3.81974	68	-	ADKT01	627	3669	3293	11/9/10	3/23/17	Contig	RIVM	SAMN02470859	GCA_000193555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/555/GCA_000193555.2_ASM19355v2	21070624	B1831
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.02785	37.6	-	JWAQ01	290	3104	2946	7/10/15	3/26/17	Contig	University of Washington	SAMN03197122	GCA_001052865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/865/GCA_001052865.1_ASM105286v1	26230489	1165_EFCM
Neisseria gonorrhoeae	485	PRJNA275092	275092	Proteobacteria	Betaproteobacteria	2.07575	52.7	-	NAGO01	111	2437	2090	4/6/17	4/10/17	Contig	Trinity College Dublin	SAMN03339570	GCA_002080825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/825/GCA_002080825.1_ASM208082v1	-	NGSJH10
Enterococcus faecalis EnGen0416	1391486	PRJNA217019	217019	Terrabacteria group	Firmicutes	2.98094	37.5	-	JAHV01	9	3073	2894	1/13/14	3/24/17	Scaffold	Broad Institute	SAMN02333892	GCA_000519745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/745/GCA_000519745.1_Ente_faec_B327_V1	-	EnGen0416
Klebsiella pneumoniae MGH 60	1438785	PRJNA234259	234259	Proteobacteria	Gammaproteobacteria	5.51301	57.3	-	JMYY01	12	5512	5239	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581392	GCA_000694495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/495/GCA_000694495.1_Kleb_pneu_MGH_60_V1	-	MGH 60
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.2357	45.2	-	JNTY02	60	5082	4862	6/13/14	4/13/17	Contig	FDA/CFSAN	SAMN02741351	GCA_000707885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/885/GCA_000707885.2_ASM70788v2	"2,510,376,428,330,880"	CFSAN001614
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.18609	28.6	-	MOPW01	117	3837	3693	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710860	GCA_002301435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/435/GCA_002301435.1_ASM230143v1	-	5541-CF/ST37
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.04141	47.5	-	LGOR01	112	3862	3687	7/24/15	3/26/17	Contig	University of maryland	SAMN03839377	GCA_001187145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/145/GCA_001187145.1_ASM118714v1	-	NHCM-047
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.17004	68.2	-	LWWT01	240	7456	6858	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208609	GCA_001977655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/655/GCA_001977655.1_ASM197765v1	-	RF68-BP5
Shigella sonnei	624	PRJEB2460	204320	Proteobacteria	Gammaproteobacteria	4.78412	50.6	-	CXFU01	387	5240	4590	7/16/15	2/24/17	Scaffold	SC	SAMEA1027673	GCA_001250415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/415/GCA_001250415.1_6350_1_3	-	sh02-9633
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.41396	38.3	-	FJHN01	26	3126	3018	2/20/16	3/27/17	Contig	SC	SAMEA1967555	GCA_900060765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/765/GCA_900060765.1_10625_2_44	-	2532STDY5467517
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.04839	41.2	-	CZEG01	35	2055	1947	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595190	GCA_900009575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/575/GCA_900009575.1_assembly_971724	-	-
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	1.98573	35.1	-	LCTQ01	18	2039	1922	5/19/15	3/17/17	Contig	Novartis Vaccines	SAMN03435032	GCA_001010335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/335/GCA_001010335.1_ASM101033v1	25946017	DK-PW-097
Acinetobacter baumannii TG27379	1315178	PRJNA196297	196297	Proteobacteria	Gammaproteobacteria	4.16189	39.2	-	ASGH01	84	4007	3786	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055538	GCA_000453405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/405/GCA_000453405.1_ASM45340v1	-	TG27379
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.65781	66.3	-	JTMN01	117	6420	6182	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105756	GCA_000793245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/245/GCA_000793245.1_AZPAE15059	25367914	AZPAE15059
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.74102	38.3	-	LRGV01	15	1728	1625	5/6/16	3/28/17	Scaffold	Menzies School of Health Research	SAMN03988131	GCA_001638575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/575/GCA_001638575.1_ASM163857v1	-	SST2099-1
Neisseria meningitidis	487	PRJNA339499	339499	Proteobacteria	Betaproteobacteria	2.11465	51.6	-	MDSH01	208	2400	2013	9/7/16	3/21/17	Contig	Christian Medical College	SAMN05592085	GCA_001721325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/325/GCA_001721325.1_ASM172132v1	-	VB13856
Helicobacter pylori UM111	1352345	PRJNA212354	212354	Proteobacteria	delta/epsilon subdivisions	1.66313	38.7	-	AUSR01	38	1631	1458	8/6/13	3/24/17	Contig	UM-UNSW-MGRC	SAMN02214239	GCA_000444305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/305/GCA_000444305.1_UM111	24051312	UM111
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.06123	39.8	-	CKQK01	52	2279	2064	3/21/15	3/11/17	Contig	SC	SAMEA1025007	GCA_001086125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/125/GCA_001086125.1_6680_6_2	-	SMRU938
Mycoplasma canis	29555	PRJNA282829	282829	Terrabacteria group	Tenericutes	0.968791	27	chromosome:NZ_CP011368.1/CP011368.1	-	1	752	682	5/5/15	4/3/17	Complete Genome	University of Florida	SAMN03580089	GCA_000988065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/065/GCA_000988065.1_ASM98806v1	-	LV
Mycobacterium tuberculosis TKK_03_0044	1448403	PRJNA235408	235408	Terrabacteria group	Actinobacteria	4.39448	65.6	-	JJZT01	4	4272	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585898	GCA_000651575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/575/GCA_000651575.1_Myco_tube_TKK_03_0044_V1	-	TKK_03_0044
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.57431	32	-	JVGE01	83	2557	2401	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197654	GCA_001073075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/075/GCA_001073075.1_ASM107307v1	26230489	460_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.37472	35.2	-	MIFN01	72	5799	5480	12/21/16	3/28/17	Scaffold	"OARSA, CFSAN"	SAMN05608045	GCA_001913385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/385/GCA_001913385.1_ASM191338v1	-	MOD1_Bc66
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.01255	38	-	JOZR01	14	3043	2955	7/15/14	2/26/17	Contig	Cornell University	SAMN02741552	GCA_000727825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/825/GCA_000727825.1_ASM72782v1	-	FSL R8-6641
Yersinia pestis	632	PRJNA306613	306613	Proteobacteria	Gammaproteobacteria	4.6052	47.5	-	LPVG01	285	4218	3504	3/28/16	3/28/16	Contig	"Russian Research Anti-Plague institute ""Microbe"""	SAMN04357319	GCA_001601285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/285/GCA_001601285.1_ASM160128v1	-	I1996
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64569	30.5	-	CUSF01	21	1722	1625	3/31/15	3/18/17	Contig	SC	SAMEA1010386	GCA_001228585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/585/GCA_001228585.1_7092_1_88	-	OXC6535
Mesoplasma florum W37	1406864	PRJNA222289	222289	Terrabacteria group	Tenericutes	0.825824	27	chromosome 1:NC_022583.1/CP006778.1	-	1	764	713	10/24/13	4/9/17	Complete Genome	Universite de Sherbrooke	SAMN02604109	GCA_000479355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/355/GCA_000479355.1_ASM47935v1	24285658	W37
Staphylococcus aureus M0934	1158701	PRJNA88701	88701	Terrabacteria group	Firmicutes	2.93556	33.1	-	AIXU01	5	3057	2888	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809042	GCA_000362225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/225/GCA_000362225.1_Stap_aure_M0934_V1	-	M0934
Staphylococcus aureus M0943	1158702	PRJNA88703	88703	Terrabacteria group	Firmicutes	2.8686	32.8	-	AIXV01	6	3003	2842	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809043	GCA_000362245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/245/GCA_000362245.1_Stap_aure_M0943_V1	-	M0943
Mycoplasma parvum str. Indiana	1403316	PRJNA219646	219646	Terrabacteria group	Tenericutes	0.564395	27	chromosome:NC_022575.1/CP006771.1	-	1	572	530	10/21/13	4/17/17	Complete Genome	Purdue University	SAMN02360547	GCA_000477415.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/415/GCA_000477415.1_ASM47741v1	24285648	Indiana
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.63262	30.4	-	CUTS01	11	1715	1599	3/31/15	3/18/17	Contig	SC	SAMEA1401495	GCA_001228625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/625/GCA_001228625.1_7213_3_35	-	OXC6578
Yersinia pestis	632	PRJNA305970	305970	Proteobacteria	Gammaproteobacteria	4.48531	47.6	-	LPTX01	370	4093	1185	3/29/16	3/29/16	Contig	Russian Research Anti-Plague Institute 'Microbe'	SAMN04336076	GCA_001601675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/675/GCA_001601675.1_ASM160167v1	-	C741
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	2.88838	37.9	-	JOZP01	16	2917	2816	7/15/14	2/26/17	Contig	Cornell University	SAMN02741550	GCA_000727845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/845/GCA_000727845.1_ASM72784v1	-	FSL R8-6625
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.31183	35.2	-	MIFM01	95	5764	5413	12/21/16	3/28/17	Scaffold	"OARSA, CFSAN"	SAMN05608041	GCA_001913395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/395/GCA_001913395.1_ASM191339v1	-	MOD1_Bc72
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.51877	32.2	-	JVFN01	67	2537	2398	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197671	GCA_001073115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/115/GCA_001073115.1_ASM107311v1	26230489	479_SEPI
Mycobacterium tuberculosis TKK_03_0047	1448404	PRJNA235409	235409	Terrabacteria group	Actinobacteria	4.42507	65.5	-	JJZS01	11	4289	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585899	GCA_000651595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/595/GCA_000651595.1_Myco_tube_TKK_03_0047_V1	-	TKK_03_0047
Mycoplasma putrefaciens Mput9231	1292033	PRJNA188690	188690	Terrabacteria group	Tenericutes	0.859996	27	chromosome:NC_021083.1/CP004357.1	-	1	747	677	4/22/13	4/8/17	Complete Genome	EVOLMYCO	SAMN02603228	GCA_000376625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/625/GCA_000376625.1_ASM37662v1	23766410	Mput9231
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.98551	39.8	-	CNRQ02	159	2159	1932	3/23/15	3/11/17	Contig	SC	SAMEA1032521	GCA_001086165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/165/GCA_001086165.2_6999_2_13	-	R34-3219
Helicobacter pylori UM023	1365636	PRJNA212345	212345	Proteobacteria	delta/epsilon subdivisions	1.62308	38.8	-	AUSK01	34	1611	1423	8/6/13	3/24/17	Contig	UM-UNSW-MGRC	SAMN02230262	GCA_000444325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/325/GCA_000444325.1_UM023	24051312	UM023
Neisseria meningitidis	487	PRJNA339501	339501	Proteobacteria	Betaproteobacteria	2.11969	51.6	-	MDSI01	206	2411	2021	9/7/16	3/21/17	Contig	Christian Medical College	SAMN05592158	GCA_001721335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/335/GCA_001721335.1_ASM172133v1	-	VB15548
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.75048	38.4	-	LRGW01	10	1749	1663	5/6/16	3/28/17	Scaffold	Menzies School of Health Research	SAMN03988132	GCA_001638585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/585/GCA_001638585.1_ASM163858v1	-	SST2102-1
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.71626	66.1	-	JTMM01	146	6425	6184	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105757	GCA_000793255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/255/GCA_000793255.1_AZPAE15060	25367914	AZPAE15060
Acinetobacter baumannii TG27383	1315179	PRJNA196298	196298	Proteobacteria	Gammaproteobacteria	4.02418	39	-	ASGI01	116	3877	3740	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055539	GCA_000453425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/425/GCA_000453425.1_ASM45342v1	-	TG27383
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.03257	35.4	-	LCTS01	35	2077	1921	5/19/15	3/17/17	Contig	Novartis Vaccines	SAMN03435034	GCA_001010345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/345/GCA_001010345.1_ASM101034v1	25946017	ES-NI-001
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.32558	41	-	CZFD01	120	2405	2210	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595216	GCA_900009585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/585/GCA_900009585.1_assembly_GD-0012	-	-
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.53767	38.3	-	FJIS01	59	3229	3089	2/20/16	3/27/17	Contig	SC	SAMEA2078026	GCA_900060775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/775/GCA_900060775.1_10625_3_58	-	2532STDY5467627
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.76359	50.5	-	CWTA01	465	5401	4492	7/17/15	2/24/17	Scaffold	SC	SAMEA3345014	GCA_001250475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/475/GCA_001250475.1_H14058015001	-	15001ss_1
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.00004	68.3	-	LWWU01	269	7298	6660	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208610	GCA_001977675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/675/GCA_001977675.1_ASM197767v1	-	NRF77-BP3
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.03741	47.5	-	LGOU01	79	3839	3692	7/24/15	3/26/17	Contig	University of maryland	SAMN03839380	GCA_001187165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/165/GCA_001187165.1_ASM118716v1	-	NHCM-054
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.20095	29	-	MOPX01	291	3799	3641	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710861	GCA_002301455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/455/GCA_002301455.1_ASM230145v1	-	5542-Y/ST2
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.01779	45.3	-	JNUO02	36	4787	4579	6/13/14	3/20/17	Contig	FDA/CFSAN	SAMN02741390	GCA_000707905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/905/GCA_000707905.2_ASM70790v2	26994080	CFSAN007454
Klebsiella pneumoniae MGH 64	1438787	PRJNA234263	234263	Proteobacteria	Gammaproteobacteria	5.40765	57.4	-	JMYZ01	4	5367	5113	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581396	GCA_000694515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/515/GCA_000694515.1_Kleb_pneu_MGH_64_V1	-	MGH 64
Enterococcus faecalis EnGen0417	1391487	PRJNA217020	217020	Terrabacteria group	Firmicutes	3.02228	37.4	-	JAHW01	11	3102	2920	1/13/14	3/24/17	Scaffold	Broad Institute	SAMN02333893	GCA_000519765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/765/GCA_000519765.1_Ente_faec_B337_V1	-	EnGen0417
Neisseria gonorrhoeae	485	PRJNA275092	275092	Proteobacteria	Betaproteobacteria	2.07991	52.8	-	NAGP01	145	2427	2087	4/6/17	4/11/17	Contig	Trinity College Dublin	SAMN03339571	GCA_002080855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/855/GCA_002080855.1_ASM208085v1	-	NGSJH11
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.04195	37.7	-	JVYL01	283	3137	2957	7/10/15	3/26/17	Contig	University of Washington	SAMN03197179	GCA_001053045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/045/GCA_001053045.1_ASM105304v1	26230489	1216.rep1_EFCM
Bordetella pertussis B1834	743276	PRJNA46275	46275	Proteobacteria	Betaproteobacteria	3.79262	68	-	ADKU01	371	3659	3307	11/9/10	3/23/17	Contig	RIVM	SAMN02470860	GCA_000193575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/575/GCA_000193575.2_ASM19357v2	21070624	B1834
Serratia marcescens	615	PRJNA383647	383647	Proteobacteria	Gammaproteobacteria	5.71835	59.1	-	NDXU01	224	5595	5226	5/4/17	8/24/17	Scaffold	National Institute for Communicable Diseases	SAMN06768592	GCA_002118055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/118/055/GCA_002118055.1_ASM211805v1	28663295	ML2637
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.63752	31.4	-	FBQB01	25	1679	1588	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683486	GCA_001490095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/095/GCA_001490095.1_H103480422	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.90754	55	-	FJZQ01	38	4837	4584	4/5/16	3/28/17	Scaffold	SC	SAMEA2273385	GCA_900075905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/905/GCA_900075905.1_11983_6_65	-	e1587
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.20993	64.2	-	FVKJ01	63	5208	5048	3/10/17	3/18/17	Contig	SC	SAMEA2070896	GCA_900134795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/795/GCA_900134795.1_10208_3_21	-	446
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.10913	54.5	-	BEFS01	164	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089498	GCA_002334325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/325/GCA_002334325.1_ASM233432v1	-	TUM11045
Pseudomonas sp. R38(2017)	1981684	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.26981	60.3	-	NEHN01	24	5771	5623	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771390	GCA_002112395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/395/GCA_002112395.1_ASM211239v1	-	R38(2017)
Streptomyces sp. MnatMP-M17	1839780	PRJEB14579	326624	Terrabacteria group	Actinobacteria	8.13727	69.4	-	FMDK01	1302	7580	6384	8/15/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04883173	GCA_900091995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/995/GCA_900091995.1_IMG-taxon_2657245726_annotated_assembly	-	MnatMP-M17
Streptomyces sp. Cmuel-A718b	697328	PRJEB14577	326626	Terrabacteria group	Actinobacteria	8.14334	71.6	-	FMDG01	176	7195	6592	8/15/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04883156	GCA_900092005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/005/GCA_900092005.1_IMG-taxon_2657245729_annotated_assembly	-	Cmuel-A718b
Pseudomonas sp. R36(2017)	1981686	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.26986	60.3	-	NEHP01	30	5775	5620	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771388	GCA_002112425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/425/GCA_002112425.1_ASM211242v1	-	R36(2017)
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.11177	54.6	-	BEFT01	149	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089499	GCA_002334345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/345/GCA_002334345.1_ASM233434v1	-	TUM11046
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.26187	64.1	-	FVKI01	26	5335	5159	3/10/17	3/18/17	Contig	SC	SAMEA2069139	GCA_900134805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/805/GCA_900134805.1_10208_3_19	-	444
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.80621	55.3	-	FJZR01	25	4716	4485	4/5/16	3/28/17	Scaffold	SC	SAMEA2273386	GCA_900075915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/915/GCA_900075915.1_11983_6_66	-	e1589
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66028	31.4	-	FBGJ01	29	1715	1623	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683235	GCA_001490155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/155/GCA_001490155.1_CCN120	-	n/a
Serratia marcescens	615	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.14868	59.9	-	NGUD01	3	4857	4674	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521886	GCA_002152845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/845/GCA_002152845.1_ASM215284v1	-	MGH135
Bordetella pertussis B1920	743278	PRJNA46279	46279	Proteobacteria	Betaproteobacteria	4.06026	67.8	-	ADKW01	1596	3716	3308	11/9/10	3/23/17	Contig	RIVM	SAMN02470864	GCA_000193615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/615/GCA_000193615.2_ASM19361v2	21070624	B1920
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.0303	37.7	-	JVWY01	299	3124	2956	7/10/15	3/26/17	Contig	University of Washington	SAMN03197218	GCA_001053155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/155/GCA_001053155.1_ASM105315v1	26230489	1251_EFCM
Neisseria gonorrhoeae	485	PRJNA275092	275092	Proteobacteria	Betaproteobacteria	2.13182	52.6	-	NAGQ01	121	2505	2160	4/6/17	4/11/17	Contig	Trinity College Dublin	SAMN03339572	GCA_002080865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/865/GCA_002080865.1_ASM208086v1	-	NGSJH12
Enterococcus faecalis EnGen0418	1391488	PRJNA217021	217021	Terrabacteria group	Firmicutes	3.02007	37.3	-	JAHX01	4	3099	2946	1/13/14	3/24/17	Scaffold	Broad Institute	SAMN02333894	GCA_000519785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/785/GCA_000519785.1_Ente_faec_B338_V1	-	EnGen0418
Klebsiella pneumoniae MGH 65	1438788	PRJNA234264	234264	Proteobacteria	Gammaproteobacteria	5.88498	56.7	-	JMZA01	12	5888	5567	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581397	GCA_000694535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/535/GCA_000694535.1_Kleb_pneu_MGH_65_V1	-	MGH 65
Vibrio parahaemolyticus	670	PRJNA253068	253068	Proteobacteria	Gammaproteobacteria	4.94333	45.4	-	JOKT01	213	4676	4188	7/21/14	3/24/17	Contig	University of Arizona	SAMN02867584	GCA_000732245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/245/GCA_000732245.1_ASM73224v1	-	13-028/A2
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.14366	28.5	-	MOPY01	174	3864	3661	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710862	GCA_002301465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/465/GCA_002301465.1_ASM230146v1	-	5544-AH/ST67
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	3.95615	47.5	-	LGOS01	108	3747	3603	7/24/15	3/26/17	Contig	University of maryland	SAMN03839378	GCA_001187175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/175/GCA_001187175.1_ASM118717v1	-	NHCM-048
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.77827	68.2	-	LWWV01	111	6981	6505	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208611	GCA_001977695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/695/GCA_001977695.1_ASM197769v1	-	SBCT-RF80-BP1
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.55377	50.8	-	CXDI01	405	4843	4291	7/16/15	2/24/17	Scaffold	SC	SAMEA954679	GCA_001250495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/495/GCA_001250495.1_5236_7_4	-	Sh373_441041
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.5397	38.3	-	FJJF01	65	3234	3088	2/20/16	3/27/17	Contig	SC	SAMEA2077749	GCA_900060785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/785/GCA_900060785.1_10625_2_83	-	2532STDY5467556
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.20625	41.1	-	CZFJ01	68	2244	2066	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595224	GCA_900009595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/595/GCA_900009595.1_assembly_GD-0028	-	-
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.08029	35.5	-	LCXB01	35	2129	1999	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435066	GCA_001015415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/415/GCA_001015415.1_ASM101541v1	25946017	GB-PW-087
Acinetobacter baumannii TG27387	1315180	PRJNA196299	196299	Proteobacteria	Gammaproteobacteria	3.93812	39	-	ASGJ01	52	3732	3599	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055540	GCA_000453445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/445/GCA_000453445.1_ASM45344v1	-	TG27387
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.48126	66.3	-	JTMK01	78	6198	6024	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105759	GCA_000793285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/285/GCA_000793285.1_AZPAE15062	25367914	AZPAE15062
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.8805	38.3	-	LRGZ01	32	1913	1829	5/6/16	3/28/17	Scaffold	Menzies School of Health Research	SAMN03988124	GCA_001638645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/645/GCA_001638645.1_ASM163864v1	-	SST2232-1
Neisseria meningitidis	487	PRJNA342903	342903	Proteobacteria	Betaproteobacteria	2.10228	51.6	-	MJAD01	198	2402	2014	9/22/16	3/21/17	Contig	Christian Medical College	SAMN05770995	GCA_001742295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/295/GCA_001742295.1_ASM174229v1	-	VB493
Helicobacter pylori UM038	1352343	PRJNA212347	212347	Proteobacteria	delta/epsilon subdivisions	1.76205	38.4	-	AUSL01	44	1731	1560	8/6/13	3/24/17	Contig	UM-UNSW-MGRC	SAMN02214237	GCA_000444345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/345/GCA_000444345.1_UM038	24051312	UM038
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14926	39.6	-	CKJU01	91	2387	2142	3/21/15	3/11/17	Contig	SC	SAMEA1024077	GCA_001086445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/445/GCA_001086445.1_6631_6_21	-	14
Mycoplasma crocodyli MP145	512564	PRJNA29021	29021	Terrabacteria group	Tenericutes	0.934379	27	chromosome:NC_014014.1/CP001991.1	-	1	792	746	3/26/10	4/17/17	Complete Genome	J. Craig Venter Institute	SAMN02603450	GCA_000025845.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/845/GCA_000025845.1_ASM2584v1	21460083	MP145
Mycobacterium tuberculosis TKK_03_0050	1448405	PRJNA235410	235410	Terrabacteria group	Actinobacteria	4.42422	65.6	-	JJZR01	7	4282	4114	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585900	GCA_000651615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/615/GCA_000651615.1_Myco_tube_TKK_03_0050_V1	-	TKK_03_0050
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.53978	32.1	-	JVDV01	117	2518	2410	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197715	GCA_001073215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/215/GCA_001073215.1_ASM107321v1	26230489	520_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.638	35.2	-	MIFA01	75	6074	5733	12/21/16	3/28/17	Scaffold	"OARSA, CFSAN"	SAMN05608067	GCA_001913465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/465/GCA_001913465.1_ASM191346v1	-	MOD1_Bc138
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.12519	37.9	-	JOZS01	23	3182	3082	7/15/14	2/26/17	Contig	Cornell University	SAMN02741553	GCA_000727865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/865/GCA_000727865.1_ASM72786v1	-	FSL R8-6649
Yersinia pestis	632	PRJNA305990	305990	Proteobacteria	Gammaproteobacteria	4.61824	47.6	-	LPTY01	402	4175	1335	3/29/16	3/29/16	Contig	Russian Research Anti-Plague Institute 'Microbe'	SAMN04337145	GCA_001601735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/735/GCA_001601735.1_ASM160173v1	-	A-1815
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.74069	30.4	-	CUML01	16	1866	1770	3/31/15	3/18/17	Contig	SC	SAMEA1010472	GCA_001228665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/665/GCA_001228665.1_7065_7_37	-	OXC6383
Arcobacter butzleri RM4018	367737	PRJNA16319	16319	Proteobacteria	delta/epsilon subdivisions	2.34125	27	chromosome:NC_009850.1/CP000361.1	-	1	2332	2256	9/27/07	3/29/17	Complete Genome	"USDA - Agricultural Research Service, USA"	SAMN02604276	GCA_000014025.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/014/025/GCA_000014025.1_ASM1402v1	"1,758,812,818,159,240"	RM4018
Staphylococcus aureus M0944	1158703	PRJNA88705	88705	Terrabacteria group	Firmicutes	2.8928	32.8	-	AIXW01	6	3032	2876	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809044	GCA_000362265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/265/GCA_000362265.1_Stap_aure_M0944_V1	-	M0944
Staphylococcus aureus M0946	1169255	PRJNA158759	158759	Terrabacteria group	Firmicutes	2.97783	32.8	-	AOAN01	10	3101	2896	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00839740	GCA_000362285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/285/GCA_000362285.1_Stap_aure_M0946_V1	-	M0946
Mesoplasma florum L1	265311	PRJNA10650	10650	Terrabacteria group	Tenericutes	0.793224	27	chromosome:NC_006055.1/AE017263.1	-	1	715	680	7/19/04	8/3/16	Complete Genome	Broad Institute	SAMN03081416	GCA_000008305.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/305/GCA_000008305.1_ASM830v1	-	L1; ATCC 33453
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64151	30.4	-	CUNO01	13	1714	1618	3/31/15	3/18/17	Contig	SC	SAMEA1010305	GCA_001228745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/745/GCA_001228745.1_7065_7_63	-	OXC6411
Yersinia pestis	632	PRJNA306803	306803	Proteobacteria	Gammaproteobacteria	4.47039	47.6	-	LPXS01	388	4008	969	4/7/16	4/7/16	Contig	"Russian Research Anti-Plague institute ""Microbe"""	SAMN04364301	GCA_001613865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/865/GCA_001613865.1_ASM161386v1	-	1116-D
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.02853	37.9	-	JOZQ01	24	3067	2976	7/15/14	2/26/17	Contig	Cornell University	SAMN02741551	GCA_000727885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/885/GCA_000727885.1_ASM72788v1	-	FSL R8-6637
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.63286	34.9	-	MIFI01	255	5956	5551	12/21/16	3/28/17	Scaffold	"OARSA, CFSAN"	SAMN05608063	GCA_001913475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/475/GCA_001913475.1_ASM191347v1	-	MOD1_Bc68
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.60528	31.9	-	JVDM01	103	2562	2442	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197724	GCA_001073235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/235/GCA_001073235.1_ASM107323v1	26230489	529_SEPI
Mycobacterium tuberculosis TKK_03_0058	1448406	PRJNA235411	235411	Terrabacteria group	Actinobacteria	4.40058	65.6	-	JJZQ01	6	4283	4098	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585901	GCA_000651635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/635/GCA_000651635.1_Myco_tube_TKK_03_0058_V1	-	TKK_03_0058
Fusobacterium nucleatum subsp. animalis 7_1	457405	PRJNA32483	32483	Fusobacteria	Fusobacteriia	2.51403	26.99	chromosome:NZ_CP007062.1/CP007062.1; plasmid unnamed:NZ_CP007063.1/CP007063.1	-	2	2496	2330	2/3/14	4/2/17	Complete Genome	Broad Institute	SAMN02463711	GCA_000158275.2	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/275/GCA_000158275.2_ASM15827v2	-	7_1
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.19177	39.6	-	CLPJ01	50	2430	2203	3/21/15	3/11/17	Contig	SC	SAMEA1029021	GCA_001086465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/465/GCA_001086465.1_6949_3_12	-	SMRU2460
Helicobacter pylori UM065	1355528	PRJNA212348	212348	Proteobacteria	delta/epsilon subdivisions	1.58665	38.9	-	AUSM01	38	1569	1409	8/6/13	3/24/17	Contig	UM-UNSW-MGRC	SAMN02230270	GCA_000444365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/365/GCA_000444365.1_UM065	24051312	UM065
Neisseria meningitidis	487	PRJNA320427	320427	Proteobacteria	Betaproteobacteria	2.13956	51.8	-	LXLA01	141	2497	2166	1/23/17	3/21/17	Contig	Indiana University School of Medicine	SAMN04939110	GCA_001969775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/775/GCA_001969775.1_ASM196977v1	28098538	G-2
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.81253	38.3	-	LRHB01	17	1828	1732	5/6/16	3/28/17	Scaffold	Menzies School of Health Research	SAMN03988146	GCA_001638675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/675/GCA_001638675.1_ASM163867v1	-	SST2235-1
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.83266	66	-	JTML01	136	6564	6318	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105758	GCA_000793295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/295/GCA_000793295.1_AZPAE15061	25367914	AZPAE15061
Acinetobacter baumannii TG27391	1315181	PRJNA196300	196300	Proteobacteria	Gammaproteobacteria	3.8652	39	-	ASGK01	290	3721	3419	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055541	GCA_000453465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/465/GCA_000453465.1_ASM45346v1	-	TG27391
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.04268	35.2	-	LCXE01	17	2112	1994	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435069	GCA_001015425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/425/GCA_001015425.1_ASM101542v1	25946017	GB-PW-094
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.22454	41.1	-	CZFM01	82	2271	2093	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595227	GCA_900009605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/605/GCA_900009605.1_assembly_GD-0034	-	-
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.43741	38.2	-	FJMM01	31	3151	3023	2/20/16	3/27/17	Contig	SC	SAMEA2078033	GCA_900060795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/795/GCA_900060795.1_10625_3_82	-	2532STDY5467651
Shigella sonnei	624	PRJEB2460	204320	Proteobacteria	Gammaproteobacteria	4.64676	50.8	-	CXFQ01	381	5083	4482	7/16/15	2/24/17	Scaffold	SC	SAMEA1027679	GCA_001250515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/515/GCA_001250515.1_6350_1_2	-	sh02-8933
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.05517	68.2	-	LWWW01	320	7383	6749	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208612	GCA_001977725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/725/GCA_001977725.1_ASM197772v1	-	RF85-BP37
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.03381	47.5	-	LGNV01	112	3801	3679	7/24/15	3/26/17	Contig	University of maryland	SAMN03839356	GCA_001187185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/185/GCA_001187185.1_ASM118718v1	-	NHCC-068
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.44817	29.7	-	MOQA01	681	3883	3743	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710864	GCA_002301495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/495/GCA_002301495.1_ASM230149v1	-	5548-Y/ST2
Vibrio parahaemolyticus	670	PRJNA255265	255265	Proteobacteria	Gammaproteobacteria	5.24699	45.3	-	JPLV01	79	5136	4899	7/24/14	3/24/17	Contig	INMEGEN-Mexico	SAMN02912086	GCA_000732985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/985/GCA_000732985.1_ASM73298v1	25125645	FIM-S1708+
Klebsiella pneumoniae MGH 66	1438789	PRJNA234265	234265	Proteobacteria	Gammaproteobacteria	5.05362	57.5	-	JMZB01	6	4987	4634	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581398	GCA_000694555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/555/GCA_000694555.1_Kleb_pneu_MGH_66_V1	-	MGH 66
Enterococcus faecalis EnGen0419	1391489	PRJNA217022	217022	Terrabacteria group	Firmicutes	2.73807	37.8	-	JAHY01	5	2742	2615	1/13/14	3/24/17	Scaffold	Broad Institute	SAMN02333895	GCA_000519805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/805/GCA_000519805.1_Ente_faec_B345_V1	-	EnGen0419
Neisseria gonorrhoeae	485	PRJNA275092	275092	Proteobacteria	Betaproteobacteria	2.06997	52.7	-	NAGS01	113	2407	2089	4/6/17	4/11/17	Contig	Trinity College Dublin	SAMN03339574	GCA_002080895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/895/GCA_002080895.1_ASM208089v1	-	NGSJH14
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.00139	37.7	-	JVWT01	357	3084	2915	7/10/15	3/26/17	Contig	University of Washington	SAMN03197223	GCA_001053215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/215/GCA_001053215.1_ASM105321v1	26230489	1256_EFCM
Bordetella pertussis I002	1331270	PRJNA202173	202173	Proteobacteria	Betaproteobacteria	4.04757	67.7	-	AXSI02	63	3943	3460	10/24/13	3/24/17	Contig	JCVI	SAMN02436246	GCA_000479395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/395/GCA_000479395.2_gbp07v01	24356839	I002
Serratia marcescens	615	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.31132	59.5	-	NGUE01	6	4978	4761	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521887	GCA_002153355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/355/GCA_002153355.1_ASM215335v1	-	MGH136
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.86898	30.9	-	FBGP01	76	1969	1839	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683238	GCA_001490175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/175/GCA_001490175.1_UNF383D	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.84383	55	-	FJZS01	33	4740	4515	4/6/16	3/28/17	Scaffold	SC	SAMEA2273387	GCA_900075925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/925/GCA_900075925.1_12082_4_49	-	e1603
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.29241	64.1	-	FVKF01	19	5364	5254	3/10/17	3/18/17	Contig	SC	SAMEA2069141	GCA_900134815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/815/GCA_900134815.1_10208_3_25	-	450
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.10696	54.6	-	BEFU01	134	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089500	GCA_002334365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/365/GCA_002334365.1_ASM233436v1	-	TUM11047
Pseudomonas sp. R35(2017)	1981687	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.41162	60.6	-	NEHQ01	32	5880	5735	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771387	GCA_002112445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/445/GCA_002112445.1_ASM211244v1	-	R35(2017)
Streptomyces sp. DpondAA-F4	1839770	PRJEB15212	339604	Terrabacteria group	Actinobacteria	7.3545	71.8	-	FMIG01	111	6645	6188	8/25/16	8/2/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04883147	GCA_900095575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/575/GCA_900095575.1_IMG-taxon_2657245715_annotated_assembly	-	DpondAA-F4
Streptomyces sp. KS_16	1855350	PRJEB15826	347764	Terrabacteria group	Actinobacteria	8.06876	71	-	FNKS01	2	7167	6657	10/20/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216511	GCA_900102245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/245/GCA_900102245.1_IMG-taxon_2671180083_annotated_assembly	-	KS_16
Pseudomonas sp. R33(2017)	1981689	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.269	60.3	-	NEHS01	25	5774	5623	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771385	GCA_002112455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/455/GCA_002112455.1_ASM211245v1	-	R33(2017)
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.09626	54.6	-	BEFV01	223	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089501	GCA_002334385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/385/GCA_002334385.1_ASM233438v1	-	TUM11048
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.94155	64.2	-	FWCW01	25	4939	4805	3/16/17	3/24/17	Contig	SC	SAMEA2069140	GCA_900134825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/825/GCA_900134825.1_10208_3_22	-	447
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.78469	54.5	-	FJZU01	26	4647	4323	4/5/16	3/28/17	Scaffold	SC	SAMEA2273503	GCA_900075935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/935/GCA_900075935.1_12082_4_63	-	e1617
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75005	31.2	-	FBHI01	25	1844	1746	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683256	GCA_001490195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/195/GCA_001490195.1_EC3511	-	n/a
Serratia marcescens	615	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.62005	58.6	-	LFBR01	10	5281	5177	6/19/15	1/8/17	Scaffold	Broad Institute	SAMN03280432	GCA_001034375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/375/GCA_001034375.1_Serr_marc_BWH56_V1	-	BWH56
Bordetella pertussis CHLA-13	1331281	PRJNA202184	202184	Proteobacteria	Betaproteobacteria	4.02982	67.8	-	AXSE02	95	3995	3491	10/24/13	3/24/17	Contig	JCVI	SAMN02436245	GCA_000479415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/415/GCA_000479415.2_gbp18v01	24356839	CHLA-13
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.10817	37.8	-	JVSE01	236	3171	2976	7/10/15	3/26/17	Contig	University of Washington	SAMN03197342	GCA_001054465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/465/GCA_001054465.1_ASM105446v1	26230489	152_EFCM
Neisseria gonorrhoeae	485	PRJNA275092	275092	Proteobacteria	Betaproteobacteria	2.12018	52.5	-	NAGT01	125	2475	2161	4/6/17	4/11/17	Contig	Trinity College Dublin	SAMN03339575	GCA_002080905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/905/GCA_002080905.1_ASM208090v1	-	NGSJH16
Enterococcus faecalis EnGen0420	1391490	PRJNA217023	217023	Terrabacteria group	Firmicutes	2.73455	37.8	-	JAHZ01	1	2728	2618	1/13/14	3/24/17	Scaffold	Broad Institute	SAMN02333896	GCA_000519825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/825/GCA_000519825.1_Ente_faec_B347_V1	-	EnGen0420
Klebsiella pneumoniae MGH 67	1438790	PRJNA234107	234107	Proteobacteria	Gammaproteobacteria	5.69912	57.1	-	JMZC01	32	5824	5584	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581240	GCA_000694575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/575/GCA_000694575.1_Kleb_pneu_MGH_67_V1	-	MGH 67
Vibrio parahaemolyticus NBRC 12711	1219066	PRJDB345	172314	Proteobacteria	Gammaproteobacteria	4.99187	45.3	-	BBQD01	39	4698	4508	12/13/14	3/25/17	Contig	National Institute of Technology and Evaluation	SAMD00018682	GCA_000813305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/305/GCA_000813305.1_ASM81330v1	-	NBRC 12711
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.21485	29	-	MOQB01	258	3841	3662	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710865	GCA_002301505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/505/GCA_002301505.1_ASM230150v1	-	5549-NonSp/ST21
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.03775	47.5	-	LGNX01	97	3866	3687	7/24/15	3/26/17	Contig	University of maryland	SAMN03839358	GCA_001187225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/225/GCA_001187225.1_ASM118722v1	-	NHCC-079
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.99905	68.3	-	LWWY01	408	7312	6625	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208614	GCA_001977735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/735/GCA_001977735.1_ASM197773v1	-	INT2-BP12
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.76728	50.7	-	CWTO01	403	5409	4586	7/17/15	2/24/17	Scaffold	SC	SAMEA3345049	GCA_001250535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/535/GCA_001250535.1_H14122052001	-	52001ss_1
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.29415	38.2	-	FJAH01	23	3015	2909	2/20/16	3/27/17	Contig	SC	SAMEA2059979	GCA_900061455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/455/GCA_900061455.1_10771_1_33	-	2531STDY5467314
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.1897	41.2	-	CZFS01	80	2230	2081	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595232	GCA_900009615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/615/GCA_900009615.1_assembly_GD-0052	-	-
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.17145	35.4	-	LCXF01	25	2261	2125	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435070	GCA_001015435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/435/GCA_001015435.1_ASM101543v1	25946017	GB-PW-097
Acinetobacter baumannii TG27395	1315182	PRJNA196301	196301	Proteobacteria	Gammaproteobacteria	4.00851	39.2	-	ASGL01	162	3893	3709	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055542	GCA_000453485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/485/GCA_000453485.1_ASM45348v1	-	TG27395
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.76815	66.1	-	JTMJ01	113	6496	6273	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105760	GCA_000793315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/315/GCA_000793315.1_AZPAE15063	25367914	AZPAE15063
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.79077	38.3	-	LRHD01	19	1795	1711	5/6/16	3/28/17	Scaffold	Menzies School of Health Research	SAMN03988119	GCA_001638695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/695/GCA_001638695.1_ASM163869v1	-	SST2237-1
Neisseria meningitidis	487	PRJNA320426	320426	Proteobacteria	Betaproteobacteria	2.13194	51.7	-	LXLB01	126	2499	2160	1/23/17	3/21/17	Contig	Indiana University School of Medicine	SAMN04939109	GCA_001969785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/785/GCA_001969785.1_ASM196978v1	28098538	G-1
Helicobacter pylori UM084	1355530	PRJNA212351	212351	Proteobacteria	delta/epsilon subdivisions	1.65683	39.1	-	AUSO01	34	1614	1438	8/6/13	3/24/17	Contig	UM-UNSW-MGRC	SAMN02230273	GCA_000444385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/385/GCA_000444385.1_UM084	24051312	UM084
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.13826	39.6	-	CMOI01	83	2334	2107	3/22/15	3/11/17	Contig	SC	SAMEA1968864	GCA_001086505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/505/GCA_001086505.1_9803_7_30	-	6B
Fusobacterium nucleatum subsp. polymorphum	76857	PRJEB6403	251923	Fusobacteria	Fusobacteriia	2.45506	26.9878	chromosome 1:NZ_LN831027.1/LN831027.1; plasmid 2:NZ_LN831028.1/LN831028.1	-	2	2421	2268	3/22/15	4/4/17	Complete Genome	SC	SAMEA2479572	GCA_001457555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/555/GCA_001457555.1_NCTC10562	-	NCTC10562
Mycobacterium tuberculosis TKK_03_0059	1448407	PRJNA235412	235412	Terrabacteria group	Actinobacteria	4.41478	65.6	-	JJZP01	4	4297	4124	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585902	GCA_000651655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/655/GCA_000651655.1_Myco_tube_TKK_03_0059_V1	-	TKK_03_0059
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.49957	31.8	-	JVCM01	222	2486	2354	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197750	GCA_001073295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/295/GCA_001073295.1_ASM107329v1	26230489	551_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	4.93015	35.5	-	MIFH01	359	5354	5000	12/21/16	3/28/17	Scaffold	"OARSA, CFSAN"	SAMN05608072	GCA_001913485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/485/GCA_001913485.1_ASM191348v1	-	MOD1_Bc55
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	2.99028	37.9	-	JOZG01	137	3064	2946	7/15/14	2/26/17	Contig	Cornell University	SAMN02741541	GCA_000727905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/905/GCA_000727905.1_ASM72790v1	-	FSL R8-6456
Yersinia pestis	632	PRJNA306809	306809	Proteobacteria	Gammaproteobacteria	4.58992	47.5	-	LPXT01	435	4215	3720	4/7/16	4/7/16	Contig	"Russian Research Anti-Plague institute ""Microbe"""	SAMN04364306	GCA_001613885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/885/GCA_001613885.1_ASM161388v1	-	M-978
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.78218	30.2	-	CUTL01	27	1883	1740	3/31/15	3/18/17	Contig	SC	SAMEA1401648	GCA_001228805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/805/GCA_001228805.1_7213_3_29	-	OXC6572
Methanobrevibacter olleyae	294671	PRJNA49591	49591	Euryarchaeota	Methanobacteria	2.20119	26.9	chromosome:NZ_CP014265.1/CP014265.1	-	1	1868	1778	2/18/16	4/12/17	Complete Genome	PGgRc	SAMN04335716	GCA_001563245.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/245/GCA_001563245.1_ASM156324v1	27056228	YLM1
Staphylococcus aureus M0953	1158704	PRJNA88707	88707	Terrabacteria group	Firmicutes	2.84657	32.8	-	AIXX01	6	2980	2815	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809045	GCA_000362305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/305/GCA_000362305.1_Stap_aure_M0953_V1	-	M0953
Staphylococcus aureus M0964	1169256	PRJNA158761	158761	Terrabacteria group	Firmicutes	2.88062	32.8	-	AOAO01	8	3026	2870	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00839741	GCA_000362325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/325/GCA_000362325.1_Stap_aure_M0964_V1	-	M0964
Fusobacterium nucleatum subsp. animalis	76859	PRJNA270143	270143	Fusobacteria	Fusobacteriia	2.54935	26.9	chromosome:NZ_CP012713.1/CP012713.1	-	1	2458	2260	9/22/15	4/4/17	Complete Genome	Chosun University	SAMN03263149	GCA_001296085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/296/085/GCA_001296085.1_ASM129608v1	-	KCOM 1279
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69251	30.3	-	CURW01	14	1791	1652	3/31/15	3/18/17	Contig	SC	SAMEA1010544	GCA_001228825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/825/GCA_001228825.1_7092_1_79	-	OXC6526
Yersinia pestis	632	PRJNA307141	307141	Proteobacteria	Gammaproteobacteria	4.5733	47.5	-	LQAU01	282	4204	3731	4/8/16	4/8/16	Contig	"Russian Research Anti-Plague institute ""Microbe"""	SAMN04376023	GCA_001617705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/705/GCA_001617705.1_Yersinia_pestis_C-791	-	C-791
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.06414	37.9	-	JOZI01	23	3102	3010	7/15/14	2/26/17	Contig	Cornell University	SAMN02741543	GCA_000727915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/915/GCA_000727915.1_ASM72791v1	-	FSL R8-6488
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.28248	35.3	-	MIEZ01	60	5788	5479	12/21/16	3/28/17	Scaffold	"OARSA, CFSAN"	SAMN05415710	GCA_001913535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/535/GCA_001913535.1_ASM191353v1	-	MOD1_Bc133
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.58674	31.8	-	JVDF01	107	2536	2445	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197731	GCA_001073305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/305/GCA_001073305.1_ASM107330v1	26230489	535_SEPI
Mycobacterium tuberculosis TKK_03_0062	1448409	PRJNA235414	235414	Terrabacteria group	Actinobacteria	4.42732	65.5	-	JJZO01	8	4305	4132	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585904	GCA_000651675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/675/GCA_000651675.1_Myco_tube_TKK_03_0062_V1	-	TKK_03_0062
Mycoplasma hominis	2098	PRJNA277034	277034	Terrabacteria group	Tenericutes	0.700851	26.9	chromosome:NZ_CP009677.1/CP009677.1	-	1	614	565	3/5/15	4/3/17	Complete Genome	Vaginal Microbiome Consortium	SAMN03083652	GCA_000947915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/915/GCA_000947915.1_ASM94791v1	25637842	AF1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.98492	39.8	-	CNZU02	156	2154	1932	3/22/15	3/11/17	Contig	SC	SAMEA1463005	GCA_001086585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/585/GCA_001086585.2_7553_5_76	-	PT8039
Helicobacter pylori UM114	1355531	PRJNA212355	212355	Proteobacteria	delta/epsilon subdivisions	1.70894	38.9	-	AUSS01	36	1685	1497	8/6/13	3/24/17	Contig	UM-UNSW-MGRC	SAMN02230279	GCA_000444495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/495/GCA_000444495.1_UM114	24051312	UM114
Neisseria meningitidis	487	PRJNA373939	373939	Proteobacteria	Betaproteobacteria	2.13207	51.6	-	MVCA01	263	2426	1992	2/16/17	4/11/17	Contig	Christian Medical College	SAMN06319101	GCA_002001355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/355/GCA_002001355.1_ASM200135v1	-	VB860
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.81278	38.3	-	LRHA01	11	1833	1734	5/6/16	3/28/17	Scaffold	Menzies School of Health Research	SAMN03988145	GCA_001638725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/725/GCA_001638725.1_ASM163872v1	-	SST2233-1
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.68706	66.2	-	JTMI01	124	6450	6183	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105761	GCA_000793345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/345/GCA_000793345.1_AZPAE15064	25367914	AZPAE15064
Acinetobacter baumannii TG27399	1315183	PRJNA196302	196302	Proteobacteria	Gammaproteobacteria	4.02395	39.1	-	ASGM01	131	3903	3735	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055543	GCA_000453505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/505/GCA_000453505.1_ASM45350v1	-	TG27399
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.19687	35.7	-	LCXC01	42	2305	2141	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435067	GCA_001015445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/445/GCA_001015445.1_ASM101544v1	25946017	GB-PW-088
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.27647	41.1	-	CZGG01	75	2317	2141	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595241	GCA_900009625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/625/GCA_900009625.1_assembly_GD-0072	-	-
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.51759	38.3	-	FJBE01	57	3235	3077	2/20/16	3/27/17	Contig	SC	SAMEA2064184	GCA_900061475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/475/GCA_900061475.1_10771_3_4	-	2531STDY5467381
Shigella sonnei	624	PRJEB2460	204320	Proteobacteria	Gammaproteobacteria	4.65488	50.7	-	CXFG01	374	5050	4486	7/16/15	2/24/17	Scaffold	SC	SAMEA1027690	GCA_001250555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/555/GCA_001250555.1_6350_1_10	-	sh07-1608
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.18041	68.1	-	LWWX01	338	7460	6828	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208613	GCA_001977745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/745/GCA_001977745.1_ASM197774v1	-	RF87-BP2
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.03214	47.5	-	LGNZ01	105	3808	3669	7/24/15	3/26/17	Contig	University of maryland	SAMN03839359	GCA_001187245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/245/GCA_001187245.1_ASM118724v1	-	NHCC-080
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.09954	28.4	-	MOQC01	79	3802	3619	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710866	GCA_002301525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/525/GCA_002301525.1_ASM230152v1	-	5550-AH/ST67
Vibrio parahaemolyticus 846	1288783	PRJNA188203	188203	Proteobacteria	Gammaproteobacteria	5.08458	45.3	-	AOOX01	115	4889	4655	2/18/15	3/25/17	Contig	NOAA Northwest Fisheries Science Center	SAMN02204306	GCA_000877405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/405/GCA_000877405.1_ASM87740v1	-	846
Klebsiella pneumoniae MGH 69	1438792	PRJNA234109	234109	Proteobacteria	Gammaproteobacteria	5.77655	56.9	-	JMZE01	11	5756	5479	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581242	GCA_000694615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/615/GCA_000694615.1_Kleb_pneu_MGH_69_V1	-	MGH 69
Enterococcus faecalis EnGen0421	1391491	PRJNA217024	217024	Terrabacteria group	Firmicutes	3.0112	37.3	-	JAIA01	8	3071	2921	1/13/14	3/24/17	Scaffold	Broad Institute	SAMN02333897	GCA_000519845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/845/GCA_000519845.1_Ente_faec_B348_V1	-	EnGen0421
Neisseria gonorrhoeae	485	PRJNA275092	275092	Proteobacteria	Betaproteobacteria	2.13733	52.5	-	NAGV01	103	2524	2192	4/6/17	4/10/17	Contig	Trinity College Dublin	SAMN03339577	GCA_002080935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/935/GCA_002080935.1_ASM208093v1	-	NGSJH19
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.34122	37.6	-	JVQW01	255	3492	3270	7/10/15	3/26/17	Contig	University of Washington	SAMN03197376	GCA_001055715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/715/GCA_001055715.1_ASM105571v1	26230489	185_EFCM
Bordetella pertussis CHLA-15	1331282	PRJNA202185	202185	Proteobacteria	Betaproteobacteria	3.84421	67.9	-	AXSD02	138	3693	3299	10/24/13	3/24/17	Contig	JCVI	SAMN02436199	GCA_000479435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/435/GCA_000479435.2_gbp19v01	24356839	CHLA-15
Serratia marcescens	615	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.38178	59.7	-	JTBC01	14	5040	4007	11/14/14	7/6/17	Contig	US Food and Drug Administration 	SAMN02934533	GCA_000783615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/615/GCA_000783615.1_ASM78361v1	-	FDAARGOS_79
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65878	31.4	-	FBAR01	19	1715	1625	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683083	GCA_001490215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/215/GCA_001490215.1_EC3575	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.80202	55.5	-	FJZT01	25	4706	4520	4/5/16	3/28/17	Scaffold	SC	SAMEA2273388	GCA_900075945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/945/GCA_900075945.1_11983_6_67	-	e1605
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.87074	64.3	-	FVKE01	15	4849	4714	3/10/17	3/18/17	Contig	SC	SAMEA2070898	GCA_900134835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/835/GCA_900134835.1_10208_3_27	-	452
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.10209	54.7	-	BEFW01	278	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089502	GCA_002334405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/405/GCA_002334405.1_ASM233440v1	-	TUM11049
Pseudomonas sp. R28(2017)	1981693	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	5.99401	63.8	-	NEHW01	44	5496	5323	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771381	GCA_002112505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/505/GCA_002112505.1_ASM211250v1	-	R28(2017)
Streptomyces sp. 2112.2	1881024	PRJEB16407	349415	Terrabacteria group	Actinobacteria	8.37719	71.1	-	FNSG01	3	7156	6807	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428942	GCA_900104865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/865/GCA_900104865.1_IMG-taxon_2684623024_annotated_assembly	-	2112.2
Streptomyces sp. 2133.1	1881021	PRJEB16438	349337	Terrabacteria group	Actinobacteria	8.13051	71	-	FNTM01	2	7241	6784	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428940	GCA_900105235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/235/GCA_900105235.1_IMG-taxon_2687453697_annotated_assembly	-	2133.1
Pseudomonas sp. R29(2017)	1981692	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.21697	64.8	-	NEHV01	65	5586	5425	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771382	GCA_002112515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/515/GCA_002112515.1_ASM211251v1	-	R29(2017)
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.10776	54.6	-	BEFX01	207	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089503	GCA_002334425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/425/GCA_002334425.1_ASM233442v1	-	TUM11050
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.95608	64.2	-	FVKB01	13	4976	4859	3/10/17	3/18/17	Contig	SC	SAMEA2071556	GCA_900134865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/865/GCA_900134865.1_10208_3_26	-	451
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.28477	54.6	-	FJZW01	85	5332	5041	4/5/16	3/28/17	Scaffold	SC	SAMEA2273512	GCA_900075955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/955/GCA_900075955.1_12045_5_82	-	e1627
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.76091	31.2	-	FBBC01	25	1849	1756	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683091	GCA_001490235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/235/GCA_001490235.1_H072820535	-	n/a
Serratia marcescens subsp. marcescens	211759	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	6.30038	58.5	-	LJDL02	311	5995	5659	10/15/15	11/25/16	Contig	University of KwaZulu Natal	SAMN04011421	GCA_001316425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/425/GCA_001316425.2_UNN41_S5v.02	-	950174583
Bordetella pertussis H897	1331264	PRJNA202167	202167	Proteobacteria	Betaproteobacteria	3.93867	67.8	-	AXSO02	173	4010	3377	10/24/13	3/24/17	Contig	JCVI	SAMN02436247	GCA_000479455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/455/GCA_000479455.2_gbp01v01	24356839	H897
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.93523	37.7	-	JVJM01	392	3010	2853	7/10/15	3/26/17	Contig	University of Washington	SAMN03197568	GCA_001056515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/515/GCA_001056515.1_ASM105651v1	26230489	377_EFCM
Neisseria gonorrhoeae	485	PRJNA275092	275092	Proteobacteria	Betaproteobacteria	2.12794	52.5	-	NAGH01	131	2487	2160	4/6/17	4/11/17	Contig	Trinity College Dublin	SAMN03339563	GCA_002080955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/955/GCA_002080955.1_ASM208095v1	-	NGSJH1
Enterococcus faecalis EnGen0422	1391492	PRJNA217025	217025	Terrabacteria group	Firmicutes	3.26073	37.4	-	JAIB01	14	3373	3192	1/13/14	3/24/17	Scaffold	Broad Institute	SAMN02333898	GCA_000519865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/865/GCA_000519865.1_Ente_faec_B350_V1	-	EnGen0422
Klebsiella pneumoniae MGH 70	1438793	PRJNA234110	234110	Proteobacteria	Gammaproteobacteria	5.69196	57	-	JMZF01	11	5712	5403	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581243	GCA_000694635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/635/GCA_000694635.1_Kleb_pneu_MGH_70_V1	-	MGH 70
Vibrio parahaemolyticus VP551	1288781	PRJNA188198	188198	Proteobacteria	Gammaproteobacteria	5.22687	45.3	-	AOOV01	30	5023	4793	2/18/15	3/25/17	Contig	NOAA Northwest Fisheries Science Center	SAMN02204304	GCA_000877415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/415/GCA_000877415.1_ASM87741v1	-	VP551
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.21903	28.4	-	MOQD01	93	3920	3767	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710867	GCA_002301555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/555/GCA_002301555.1_ASM230155v1	-	5551-CF/ST37
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.05564	47.5	-	LGNY01	128	3846	3722	7/24/15	3/26/17	Contig	University of maryland	SAMN03839340	GCA_001187255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/255/GCA_001187255.1_ASM118725v1	-	EM-1542
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.03874	68.3	-	LWXC01	140	7284	6767	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208618	GCA_001977785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/785/GCA_001977785.1_ASM197778v1	-	INT2-BP89
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.68613	50.7	-	CWYF01	396	5232	4513	7/16/15	2/24/17	Scaffold	SC	SAMEA2445704	GCA_001250575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/575/GCA_001250575.1_12971_8_23	-	H092580349
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.48943	38.3	-	FJBU01	37	3202	3064	2/20/16	3/27/17	Contig	SC	SAMEA2059850	GCA_900061485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/485/GCA_900061485.1_10771_1_8	-	2531STDY5467289
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.15045	41.2	-	CZGC01	90	2209	2024	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595246	GCA_900009635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/635/GCA_900009635.1_assembly_GD-0080	-	-
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	1.94843	35.1	-	LCXG01	25	1987	1873	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435071	GCA_001015495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/495/GCA_001015495.1_ASM101549v1	25946017	GB-PW-106
Acinetobacter baumannii TG27407	1315184	PRJNA196303	196303	Proteobacteria	Gammaproteobacteria	4.16395	39.2	-	ASGN01	94	4026	3797	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055544	GCA_000453525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/525/GCA_000453525.1_ASM45352v1	-	TG27407
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.18446	66.5	-	JTMH01	68	5833	5670	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105762	GCA_000793365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/365/GCA_000793365.1_AZPAE15065	25367914	AZPAE15065
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.81582	38.3	-	LRHC01	29	1848	1728	5/6/16	3/28/17	Scaffold	Menzies School of Health Research	SAMN03988147	GCA_001638745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/745/GCA_001638745.1_ASM163874v1	-	SST2236-1
Neisseria meningitidis	487	PRJNA324131	324131	Proteobacteria	Betaproteobacteria	2.21163	51.6	-	MJAV01	2	2583	2229	3/22/17	3/24/17	Contig	Centers for Disease Control and Prevention	SAMN05560590	GCA_002071035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/071/035/GCA_002071035.1_ASM207103v1	-	COL-201505-31
Helicobacter pylori UM077	1352346	PRJNA212353	212353	Proteobacteria	delta/epsilon subdivisions	1.61938	38.8	-	AUSQ01	53	1612	1435	8/7/13	3/24/17	Contig	UM-UNSW-MGRC	SAMN02214242	GCA_000444725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/725/GCA_000444725.1_UM077	24051312	UM077
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.03663	39.6	-	CMJR01	56	2214	2009	3/22/15	3/4/17	Contig	SC	SAMEA1026107	GCA_001086865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/865/GCA_001086865.1_7038_8_41	-	SMRU2249
Mycoplasma hominis ATCC 27545	1267000	PRJNA264054	264054	Terrabacteria group	Tenericutes	0.715165	26.9	chromosome:NZ_CP009652.1/CP009652.1	-	1	617	570	10/22/14	4/2/17	Complete Genome	University of Missouri - Columbia	SAMN03112835	GCA_000767725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/725/GCA_000767725.1_ASM76772v1	-	LBD-4
Mycobacterium tuberculosis TKK_03_0063	1448410	PRJNA235415	235415	Terrabacteria group	Actinobacteria	4.41659	65.6	-	JJZN01	4	4279	4123	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585905	GCA_000651695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/695/GCA_000651695.1_Myco_tube_TKK_03_0063_V1	-	TKK_03_0063
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.55003	31.9	-	JVBZ01	88	2523	2399	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197763	GCA_001073395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/395/GCA_001073395.1_ASM107339v1	26230489	563_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.33719	35.4	-	MIEX01	119	5827	5500	12/21/16	3/28/17	Scaffold	"OARSA, CFSAN"	SAMN05608070	GCA_001913545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/545/GCA_001913545.1_ASM191354v1	-	MOD1_Bc135
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.13811	37.8	-	JPAA01	37	3257	3136	7/15/14	2/26/17	Contig	Cornell University	SAMN02741561	GCA_000727925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/925/GCA_000727925.1_ASM72792v1	-	FSL R8-6743
Yersinia pestis	632	PRJNA307152	307152	Proteobacteria	Gammaproteobacteria	4.5197	47.5	-	LQAV01	404	4134	3011	4/8/16	4/8/16	Contig	"Russian Research Anti-Plague institute ""Microbe"""	SAMN04376037	GCA_001617725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/725/GCA_001617725.1_Yersinia_pestis_M-1484	-	M-1484
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.76473	30.3	-	CUOJ01	18	1858	1710	3/31/15	3/18/17	Contig	SC	SAMEA1010530	GCA_001228865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/865/GCA_001228865.1_7065_7_84	-	OXC6432
Mycoplasma putrefaciens KS1	743965	PRJNA46453	46453	Terrabacteria group	Tenericutes	0.832603	26.9	chromosome:NC_015946.1/CP003021.1	-	1	722	654	8/19/11	4/7/17	Complete Genome	University of Missouri	SAMN02604224	GCA_000224105.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/105/GCA_000224105.1_ASM22410v1	21994925	KS1
Staphylococcus aureus M0978	1169257	PRJNA158763	158763	Terrabacteria group	Firmicutes	2.84963	32.9	-	AOAP01	8	3012	2858	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00839742	GCA_000362345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/345/GCA_000362345.1_Stap_aure_M0978_V1	-	M0978
Staphylococcus aureus M0994	1169258	PRJNA158765	158765	Terrabacteria group	Firmicutes	2.89814	32.9	-	AOAQ01	4	3039	2871	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00839743	GCA_000362365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/365/GCA_000362365.1_Stap_aure_M0994_V1	-	M0994
Mycoplasma fermentans M64	943945	PRJNA13415	13415	Terrabacteria group	Tenericutes	1.11875	26.9	chromosome:NC_014921.1/CP002458.1	-	1	1015	938	1/13/11	4/7/17	Complete Genome	Yang-Ming University	SAMN02604339	GCA_000186005.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/005/GCA_000186005.1_ASM18600v1	21642450	M64
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.61656	30.4	-	CUMM01	14	1707	1605	3/31/15	3/18/17	Contig	SC	SAMEA1010453	GCA_001228945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/945/GCA_001228945.1_7065_7_38	-	OXC6384
Yersinia pestis	632	PRJNA307223	307223	Proteobacteria	Gammaproteobacteria	4.47655	47.5	-	LQAY01	316	4130	3756	4/8/16	4/8/16	Contig	"Russian Research Anti-Plague institute ""Microbe"""	SAMN04376922	GCA_001617815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/815/GCA_001617815.1_Yersinia_pestis_M-1453	-	M-1453
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.12643	37.9	-	JPAQ01	30	3171	3063	7/15/14	2/26/17	Contig	Cornell University	SAMN02741577	GCA_000727945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/945/GCA_000727945.1_ASM72794v1	-	FSL R8-6936
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	6.43123	34.7	-	MIEW01	312	6925	6496	12/21/16	3/28/17	Scaffold	"OARSA, CFSAN"	SAMN05608068	GCA_001913555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/555/GCA_001913555.1_ASM191355v1	-	MOD1_Bc137
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.5264	31.9	-	JVAX01	81	2484	2388	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197791	GCA_001073485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/485/GCA_001073485.1_ASM107348v1	26230489	59_SEPI
Mycobacterium tuberculosis TKK_03_0064	1448411	PRJNA235416	235416	Terrabacteria group	Actinobacteria	4.40799	65.6	-	JJZM01	81	4329	4130	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585906	GCA_000651715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/715/GCA_000651715.1_Myco_tube_TKK_03_0064_V1	-	TKK_03_0064
Mycoplasma fermentans JER	637387	PRJNA36551	36551	Terrabacteria group	Tenericutes	0.977524	26.9	chromosome:NC_014552.1/CP001995.1	-	1	872	782	9/24/10	4/7/17	Complete Genome	Georg-August-University Goettingen	SAMN02603257	GCA_000148625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/148/625/GCA_000148625.1_ASM14862v1	21109561	JER
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09017	39.7	-	CLWE01	55	2311	2092	3/21/15	3/4/17	Contig	SC	SAMEA1026141	GCA_001087025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/025/GCA_001087025.1_6983_4_82	-	SMRU2290
Helicobacter pylori UM085	1352344	PRJNA212352	212352	Proteobacteria	delta/epsilon subdivisions	1.64506	38.7	-	AUSP01	50	1637	1468	8/7/13	3/24/17	Contig	UM-UNSW-MGRC	SAMN02214238	GCA_000444745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/745/GCA_000444745.1_UM085	24051312	UM085
Neisseria meningitidis	487	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	2.22397	51.6	-	NBTU01	1	2576	2219	4/10/17	4/13/17	Contig	US Food and Drug Administration 	SAMN04875545	GCA_002082895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/895/GCA_002082895.1_ASM208289v1	-	FDAARGOS_208
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.74256	38.3	-	LRHF01	16	1725	1627	5/6/16	3/28/17	Scaffold	Menzies School of Health Research	SAMN03988129	GCA_001638775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/775/GCA_001638775.1_ASM163877v1	-	SST2240-1
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.43779	66.4	-	JTMA01	112	6146	5943	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105769	GCA_000793385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/385/GCA_000793385.1_AZPAE15072	25367914	AZPAE15072
Acinetobacter baumannii TG27411	1315185	PRJNA196304	196304	Proteobacteria	Gammaproteobacteria	4.15608	39.2	-	ASGO01	92	4017	3781	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055545	GCA_000453545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/545/GCA_000453545.1_ASM45354v1	-	TG27411
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.06259	35.3	-	LCXD01	24	2156	2033	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435068	GCA_001015505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/505/GCA_001015505.1_ASM101550v1	25946017	GB-PW-091
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.10874	41.1	-	CZDZ01	66	2094	1954	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595188	GCA_900009745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/745/GCA_900009745.1_assembly_950136	-	-
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.43672	38.3	-	FJBS01	19	3169	3045	2/20/16	3/27/17	Contig	SC	SAMEA2058279	GCA_900061495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/495/GCA_900061495.1_10771_1_22	-	2531STDY5467303
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.87927	50.7	-	CWUS01	397	5501	4668	7/16/15	2/24/17	Scaffold	SC	SAMEA3345059	GCA_001250595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/595/GCA_001250595.1_Sg_201311626_GCGCTA_L001	-	201311626_1
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.0682	68.2	-	LWXE01	473	7416	6633	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208620	GCA_001977805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/805/GCA_001977805.1_ASM197780v1	-	INT2-BP102
Vibrio cholerae O1	127906	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.06199	47.5	-	LGOE01	87	3900	3721	7/24/15	3/26/17	Contig	University of maryland	SAMN03839364	GCA_001187265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/265/GCA_001187265.1_ASM118726v1	-	NHCM-03
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.13706	28.6	-	MOQE01	232	3700	3570	9/14/17	9/18/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710868	GCA_002301575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/575/GCA_002301575.1_ASM230157v1	-	5552-DH/ST42
Vibrio parahaemolyticus 97-10290	1288780	PRJNA188197	188197	Proteobacteria	Gammaproteobacteria	5.10386	45.3	-	AOOU01	61	4931	4695	2/18/15	3/25/17	Contig	NOAA Northwest Fisheries Science Center	SAMN02204316	GCA_000877425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/425/GCA_000877425.1_ASM87742v1	-	97-10290
Klebsiella pneumoniae MGH 71	1438794	PRJNA234111	234111	Proteobacteria	Gammaproteobacteria	5.63003	57	-	JMZG01	14	5729	5490	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581244	GCA_000694655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/655/GCA_000694655.1_Kleb_pneu_MGH_71_V1	-	MGH 71
Enterococcus faecalis EnGen0423	1391493	PRJNA217026	217026	Terrabacteria group	Firmicutes	2.83241	37.7	-	JAIC01	2	2849	2714	1/13/14	3/24/17	Scaffold	Broad Institute	SAMN02333899	GCA_000519885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/885/GCA_000519885.1_Ente_faec_B363_V1	-	EnGen0423
Neisseria gonorrhoeae	485	PRJNA275092	275092	Proteobacteria	Betaproteobacteria	2.09073	52.7	-	NAGM01	135	2442	2127	4/6/17	4/11/17	Contig	Trinity College Dublin	SAMN03339568	GCA_002080965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/965/GCA_002080965.1_ASM208096v1	-	NGSJH8
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.66942	38.1	-	JVCC01	140	2726	2536	7/10/15	3/26/17	Contig	University of Washington	SAMN03197760	GCA_001057285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/285/GCA_001057285.1_ASM105728v1	26230489	560_EFCM
Bordetella pertussis H918	1331265	PRJNA202168	202168	Proteobacteria	Betaproteobacteria	4.07371	67.7	-	AXSN02	60	3966	3402	10/24/13	4/10/17	Contig	JCVI	SAMN02436299	GCA_000479475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/475/GCA_000479475.2_gbp02v01	24356839	H918
Serratia marcescens subsp. marcescens	211759	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	6.30154	58.5	-	LJDM02	302	5992	5663	10/15/15	11/25/16	Contig	University of KwaZulu Natal	SAMN04011418	GCA_001316505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/505/GCA_001316505.2_UNN38_S2v.02	-	950164094
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65982	31.4	-	FAYA01	23	1720	1624	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683004	GCA_001490255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/255/GCA_001490255.1_EC3525	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.17911	54.6	-	FJZV01	65	5216	4944	4/6/16	3/28/17	Scaffold	SC	SAMEA2273511	GCA_900075965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/965/GCA_900075965.1_12082_4_65	-	e1623
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.54982	63.9	-	FSFL01	48	5706	5494	12/14/16	3/21/17	Contig	SC	SAMEA2071557	GCA_900134875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/875/GCA_900134875.1_10208_3_29	-	454
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.20923	54.6	-	BEFY01	317	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089504	GCA_002334445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/445/GCA_002334445.1_ASM233444v1	-	TUM11051
Pseudomonas sp. R26(2017)	1981695	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	7.08758	63.4	-	NEHY01	94	6584	6382	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771379	GCA_002112545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/545/GCA_002112545.1_ASM211254v1	-	R26(2017)
Streptomyces sp. 1222.5	1881026	PRJEB16440	349336	Terrabacteria group	Actinobacteria	8.85236	71.9	-	FNSZ01	2	8061	7606	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428944	GCA_900105245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/245/GCA_900105245.1_IMG-taxon_2690315622_annotated_assembly	-	1222.5
Streptomyces sp. 3213	1855348	PRJEB16443	349333	Terrabacteria group	Actinobacteria	10.9239	70.1	-	FNTK01	2	9940	9275	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216489	GCA_900105265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/265/GCA_900105265.1_IMG-taxon_2675903008_annotated_assembly	-	3213
Pseudomonas sp. R25(2017)	1981696	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.21054	64.8	-	NEHZ01	58	5589	5424	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771378	GCA_002112565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/565/GCA_002112565.1_ASM211256v1	-	R25(2017)
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.07155	54.7	-	BEGA01	266	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089506	GCA_002334465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/465/GCA_002334465.1_ASM233446v1	-	TUM11053
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.12952	64.1	-	FVKD01	14	5210	5046	3/10/17	3/18/17	Contig	SC	SAMEA2070890	GCA_900134885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/885/GCA_900134885.1_10208_3_3	-	428
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.92887	55.3	-	FJZX01	20	4819	4605	4/5/16	3/28/17	Scaffold	SC	SAMEA2273392	GCA_900075975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/975/GCA_900075975.1_11983_6_71	-	e1632
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66494	31.3	-	FBEV01	18	1714	1627	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683189	GCA_001490295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/295/GCA_001490295.1_EC4297	-	n/a
Serratia marcescens subsp. marcescens	211759	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	6.26719	58.5	-	LJDQ02	296	5950	5621	10/15/15	11/25/16	Contig	University of KwaZulu Natal	SAMN04011423	GCA_001316535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/535/GCA_001316535.2_UNN43_S7v.02	-	950172946/950172838
Bordetella pertussis H921	1331266	PRJNA202169	202169	Proteobacteria	Betaproteobacteria	4.06408	67.7	-	AXSM02	48	3959	3420	10/24/13	4/10/17	Contig	JCVI	SAMN02436207	GCA_000479495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/495/GCA_000479495.2_gbp03v01	24356839	H921
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.83754	37.7	-	JUWJ01	608	2892	2725	7/10/15	3/26/17	Contig	University of Washington	SAMN03197909	GCA_001058055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/055/GCA_001058055.1_ASM105805v1	26230489	704_EFCM
Neisseria gonorrhoeae	485	PRJNA275092	275092	Proteobacteria	Betaproteobacteria	2.12552	52.5	-	NAGU01	121	2484	2158	4/6/17	4/10/17	Contig	Trinity College Dublin	SAMN03339576	GCA_002080995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/995/GCA_002080995.1_ASM208099v1	-	NGSJH17
Enterococcus faecalis EnGen0424	1391494	PRJNA217027	217027	Terrabacteria group	Firmicutes	2.72258	37.7	-	JAID01	1	2723	2593	1/13/14	3/24/17	Scaffold	Broad Institute	SAMN02333900	GCA_000519905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/905/GCA_000519905.1_Ente_faec_B373_V1	-	EnGen0424
Klebsiella pneumoniae MGH 72	1438795	PRJNA234112	234112	Proteobacteria	Gammaproteobacteria	5.50894	57.3	-	JMZH01	11	5489	5224	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581245	GCA_000694675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/675/GCA_000694675.1_Kleb_pneu_MGH_72_V1	-	MGH 72
Vibrio parahaemolyticus 930	1288785	PRJNA188205	188205	Proteobacteria	Gammaproteobacteria	5.16531	45.4	-	AOOZ01	12	4955	4726	2/18/15	3/25/17	Contig	NOAA Northwest Fisheries Science Center	SAMN02204308	GCA_000877475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/475/GCA_000877475.1_ASM87747v1	-	930
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.07816	28.5	-	MOQF01	225	3754	3614	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710869	GCA_002301595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/595/GCA_002301595.1_ASM230159v1	-	5553-L/ST55
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.0128	47.5	-	CWRZ01	50	3790	3648	7/16/15	3/26/17	Contig	SC	SAMEA889177	GCA_001248505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/505/GCA_001248505.1_5174_6_8	-	4519
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.05968	68.2	-	LWXF01	201	7364	6791	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208621	GCA_001977815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/815/GCA_001977815.1_ASM197781v1	-	INT2-BP105
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.90784	50.5	-	CXLN01	422	5596	4727	7/17/15	2/24/17	Scaffold	SC	SAMEA2035205	GCA_001250635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/635/GCA_001250635.1_8290_5_12	-	22672674
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.44018	38.3	-	FJBJ01	39	3159	3004	2/20/16	3/27/17	Contig	SC	SAMEA2059856	GCA_900061505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/505/GCA_900061505.1_10771_1_17	-	2531STDY5467298
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.20831	41.1	-	CZEN01	71	2248	2076	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595203	GCA_900009755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/755/GCA_900009755.1_assembly_9402372	-	-
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.16046	35.4	-	LCXH01	14	2271	2150	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435072	GCA_001015525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/525/GCA_001015525.1_ASM101552v1	25946017	GB-PW-110
Acinetobacter baumannii TG15239	1315143	PRJNA196262	196262	Proteobacteria	Gammaproteobacteria	3.92062	38.9	-	ASFA01	109	3827	3684	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055504	GCA_000453565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/565/GCA_000453565.1_ASM45356v1	-	TG15239
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.95918	65.9	-	JTMG01	134	6688	6413	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105763	GCA_000793395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/395/GCA_000793395.1_AZPAE15066	25367914	AZPAE15066
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.8324	38.3	-	LRHG01	15	1852	1757	5/6/16	4/10/17	Scaffold	Menzies School of Health Research	SAMN03988130	GCA_001638805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/805/GCA_001638805.1_ASM163880v1	-	SST2241-1
Neisseria meningitidis	487	PRJNA329301	329301	Proteobacteria	Betaproteobacteria	2.12561	51.5	-	MCAD01	98	2504	2104	5/18/17	5/24/17	Contig	Oswaldo Cruz Institute	SAMN05437673	GCA_002148445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/445/GCA_002148445.1_ASM214844v1	28487566	Nm287
Helicobacter pylori UM067	1355529	PRJNA212350	212350	Proteobacteria	delta/epsilon subdivisions	1.68084	39	-	AUSN01	44	1671	1470	8/7/13	3/24/17	Contig	UM-UNSW-MGRC	SAMN02230272	GCA_000444785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/785/GCA_000444785.1_UM067	24051312	UM067
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.11713	39.7	-	CNSF02	205	2331	2114	3/23/15	3/11/17	Contig	SC	SAMEA1032653	GCA_001087085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/085/GCA_001087085.2_6999_3_11	-	40241
Fusobacterium nucleatum subsp. polymorphum	76857	PRJNA270146	270146	Fusobacteria	Fusobacteriia	2.62237	26.8777	chromosome:NZ_CP013121.1/CP013121.1; plasmid unnamed1:NZ_CP013122.1/CP013122.1; plasmid unnamed2:NZ_CP013123.1/CP013123.1	-	3	2563	2384	11/6/15	4/4/17	Complete Genome	Chosun University	SAMN03263152	GCA_001433955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/955/GCA_001433955.1_ASM143395v1	-	ChDC F306
Mycobacterium tuberculosis TKK_03_0065	1448412	PRJNA235417	235417	Terrabacteria group	Actinobacteria	4.39934	65.6	-	JJZL01	5	4288	4102	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585907	GCA_000651735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/735/GCA_000651735.1_Myco_tube_TKK_03_0065_V1	-	TKK_03_0065
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.52725	32.1	-	JVAK01	73	2533	2411	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197804	GCA_001073535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/535/GCA_001073535.1_ASM107353v1	26230489	604_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.62011	34.9	-	MIEV01	37	5908	5575	12/21/16	3/28/17	Scaffold	"OARSA, CFSAN"	SAMN05608066	GCA_001913575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/575/GCA_001913575.1_ASM191357v1	-	MOD1_Bc139
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.05929	37.8	-	JPAR01	32	3128	3031	7/15/14	2/26/17	Contig	Cornell University	SAMN02741578	GCA_000727985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/985/GCA_000727985.1_ASM72798v1	-	FSL R8-6963
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.65826	30.4	-	CUIH01	13	1726	1635	3/31/15	3/18/17	Contig	SC	SAMEA1010303	GCA_001229025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/025/GCA_001229025.1_7038_3_26	-	OXC6275
Aster yellows witches'-broom phytoplasma AYWB	322098	PRJNA13478	13478	Terrabacteria group	Tenericutes	0.72397	26.8254	chromosome:NC_007716.1/CP000061.1; plasmid pAYWB-I:NC_007717.1/CP000062.1; plasmid pAYWB-II:NC_007718.1/CP000063.1; plasmid pAYWB-III:NC_007719.1/CP000064.1; plasmid pAYWB-IV:NC_007720.1/CP000065.1	-	5	714	557	1/11/06	4/17/17	Complete Genome	Ohio State University	SAMN02603687	GCA_000012225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/225/GCA_000012225.1_ASM1222v1	16672622	-
Staphylococcus aureus M0998	1158705	PRJNA88709	88709	Terrabacteria group	Firmicutes	2.86725	32.8	-	AIXY01	7	3013	2847	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809046	GCA_000362385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/385/GCA_000362385.1_Stap_aure_M0998_V1	-	M0998
Staphylococcus aureus M0999	1158706	PRJNA88711	88711	Terrabacteria group	Firmicutes	2.8703	32.8	-	AIXZ01	4	2998	2846	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809047	GCA_000362405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/405/GCA_000362405.1_Stap_aure_M0999_V1	-	M0999
Fusobacterium nucleatum subsp. polymorphum	76857	PRJNA386738	386738	Fusobacteria	Fusobacteriia	2.52139	26.8	chromosome:NZ_CP022123.1/CP022123.1	-	1	2484	2325	6/30/17	7/3/17	Complete Genome	Chosun University	SAMN07125867	GCA_002211625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/625/GCA_002211625.1_ASM221162v1	-	KCOM 1275
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64751	30.4	-	CUQL01	12	1745	1632	3/31/15	3/18/17	Contig	SC	SAMEA1010245	GCA_001229065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/065/GCA_001229065.1_7092_1_45	-	OXC6492
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	2.94865	37.9	-	JPAP01	27	2996	2910	7/15/14	2/26/17	Contig	Cornell University	SAMN02741576	GCA_000727995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/727/995/GCA_000727995.1_ASM72799v1	-	FSL R8-6918
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.39318	35.2	-	MIEY01	92	5820	5443	12/21/16	3/28/17	Scaffold	"OARSA, CFSAN"	SAMN05608069	GCA_001913645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/645/GCA_001913645.1_ASM191364v1	-	MOD1_Bc136
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.54524	31.9	-	JUZR01	144	2549	2422	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197823	GCA_001073595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/595/GCA_001073595.1_ASM107359v1	26230489	623_SEPI
Mycobacterium tuberculosis TKK_03_0072	1448414	PRJNA235419	235419	Terrabacteria group	Actinobacteria	4.40245	65.5	-	JJZK01	5	4286	4098	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585909	GCA_000651755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/755/GCA_000651755.1_Myco_tube_TKK_03_0072_V1	-	TKK_03_0072
Spiroplasma helicoides	216938	PRJNA253649	253649	Terrabacteria group	Tenericutes	1.32655	26.8	chromosome:NZ_CP017015.1/CP017015.1	-	1	1174	1135	8/29/16	4/17/17	Complete Genome	Academia Sinica	SAMN05578878	GCA_001715535.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/535/GCA_001715535.1_ASM171553v1	-	TABS-2
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.13249	39.6	-	COAH02	221	2362	2119	3/22/15	3/11/17	Contig	SC	SAMEA1463285	GCA_001087145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/145/GCA_001087145.2_7553_6_8	-	422264
Helicobacter pylori PZ5004	1337390	PRJNA205195	205195	Proteobacteria	delta/epsilon subdivisions	1.5865	38.8	-	ASZF01	259	1704	1356	8/20/13	3/24/17	Contig	MIT	SAMN02470469	GCA_000448405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/405/GCA_000448405.1_HP_PZ5004	24051318	PZ5004
Neisseria meningitidis	487	PRJNA329301	329301	Proteobacteria	Betaproteobacteria	2.13116	51.5	-	MCAE01	98	2521	2101	5/18/17	5/24/17	Contig	Oswaldo Cruz Institute	SAMN05437674	GCA_002148455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/455/GCA_002148455.1_ASM214845v1	28487566	Nm288
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.74079	38.3	-	LRHJ01	17	1719	1624	5/6/16	3/28/17	Scaffold	Menzies School of Health Research	SAMN03988122	GCA_001638865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/865/GCA_001638865.1_ASM163886v1	-	SST2245-1
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.65182	66.2	-	JTMF01	126	6430	6184	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105764	GCA_000793415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/415/GCA_000793415.1_AZPAE15067	25367914	AZPAE15067
Acinetobacter baumannii TG15234	1315139	PRJNA196258	196258	Proteobacteria	Gammaproteobacteria	4.03358	39	-	ASEW01	161	3952	3795	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055500	GCA_000453585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/585/GCA_000453585.1_ASM45358v1	-	TG15234
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.0222	35.2	-	LCXI01	15	2081	1965	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435074	GCA_001015555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/555/GCA_001015555.1_ASM101555v1	25946017	IT-NI-023
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.05033	41.1	-	CZFQ01	103	2081	1921	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595225	GCA_900009765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/765/GCA_900009765.1_assembly_GD-0031	-	-
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.46171	38.2	-	FJCG01	24	3144	3012	2/20/16	3/27/17	Contig	SC	SAMEA2059997	GCA_900061515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/515/GCA_900061515.1_10060_4_63	-	2531STDY5467344
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.51463	50.8	-	CXBG01	391	4844	4319	7/16/15	2/24/17	Scaffold	SC	SAMEA954738	GCA_001250655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/655/GCA_001250655.1_5008_8_8	-	ShIB683_401084
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.14244	68.2	-	LWXD01	174	7405	6863	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208619	GCA_001977825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/825/GCA_001977825.1_ASM197782v1	-	INT2-BP100
Vibrio cholerae O1 biovar El Tor	686	PRJNA294354	294354	Proteobacteria	Gammaproteobacteria	4.04195	47.5	-	LJFF01	95	3871	3563	9/14/15	3/26/17	Contig	Stavropol Plague Control Reseach Institute	SAMN04023227	GCA_001281585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/585/GCA_001281585.1_ASM128158v1	-	31
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.16864	28.5	-	MOQI01	200	3841	3657	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710872	GCA_002301615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/615/GCA_002301615.1_ASM230161v1	-	5558-AH/ST67
Vibrio parahaemolyticus 863	1288784	PRJNA188204	188204	Proteobacteria	Gammaproteobacteria	5.22655	45.3	-	AOOY01	37	5033	4796	2/18/15	3/25/17	Contig	NOAA Northwest Fisheries Science Center	SAMN02204307	GCA_000877485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/485/GCA_000877485.1_ASM87748v1	-	863
Klebsiella pneumoniae MGH 73	1438796	PRJNA234113	234113	Proteobacteria	Gammaproteobacteria	5.50572	57	-	JMZI01	6	5502	5296	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581246	GCA_000694695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/695/GCA_000694695.1_Kleb_pneu_MGH_73_V1	-	MGH 73
Enterococcus faecalis EnGen0425	1391495	PRJNA217028	217028	Terrabacteria group	Firmicutes	2.97597	37.3	-	JAIE01	7	3061	2904	1/13/14	3/24/17	Scaffold	Broad Institute	SAMN02333901	GCA_000519925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/925/GCA_000519925.1_Ente_faec_B375_V1	-	EnGen0425
Neisseria gonorrhoeae	485	PRJNA275092	275092	Proteobacteria	Betaproteobacteria	2.13925	52.6	-	NAGR01	131	2515	2154	4/6/17	4/11/17	Contig	Trinity College Dublin	SAMN03339573	GCA_002081015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/015/GCA_002081015.1_ASM208101v1	-	NGSJH13
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.91282	37.7	-	JUWB01	394	2972	2821	7/10/15	3/26/17	Contig	University of Washington	SAMN03197917	GCA_001058095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/095/GCA_001058095.1_ASM105809v1	26230489	712_EFCM
Bordetella pertussis I036	1331271	PRJNA202174	202174	Proteobacteria	Betaproteobacteria	4.05729	67.7	-	AXSH02	46	3941	3504	10/24/13	3/24/17	Contig	JCVI	SAMN02436201	GCA_000479515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/515/GCA_000479515.2_gbp08v01	24356839	I036
Serratia marcescens subsp. marcescens	211759	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	6.23702	58.5	-	LJDS02	288	5913	5598	10/15/15	11/25/16	Contig	University of KwaZulu Natal	SAMN04011427	GCA_001316555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/555/GCA_001316555.2_UNN47_S11v.02	-	950196656
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.71983	31.3	-	FBHS01	27	1791	1699	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683266	GCA_001490315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/315/GCA_001490315.1_CCN257	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.89471	55.3	-	FJZY01	34	4784	4542	4/5/16	3/28/17	Scaffold	SC	SAMEA2273393	GCA_900075985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/985/GCA_900075985.1_12082_4_50	-	e1635
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18016	64.2	-	FVKC01	45	5170	5022	3/10/17	3/18/17	Contig	SC	SAMEA2070899	GCA_900134895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/895/GCA_900134895.1_10208_3_30	-	455
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.26185	55	-	BEGB01	224	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089507	GCA_002334485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/485/GCA_002334485.1_ASM233448v1	-	TUM11055
Pseudomonas sp. R23(2017)	1981698	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.30936	60.5	-	NEIB01	37	5732	5576	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771376	GCA_002112575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/575/GCA_002112575.1_ASM211257v1	-	R23(2017)
Streptomyces sp. KS_5	1881018	PRJEB16447	349329	Terrabacteria group	Actinobacteria	10.3444	70.9	-	FNTE01	2	9069	8596	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428938	GCA_900105275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/275/GCA_900105275.1_IMG-taxon_2690315621_annotated_assembly	-	KS_5
Streptomyces sp. TLI_105	1881019	PRJEB16374	349322	Terrabacteria group	Actinobacteria	8.87629	72.2	-	FNSM01	2	8131	7622	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428939	GCA_900105415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/415/GCA_900105415.1_IMG-taxon_2687453810_annotated_assembly	-	TLI_105
Pseudomonas sp. R20(2017)	1981701	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.21891	64.8	-	NEIE01	61	5588	5423	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771373	GCA_002112625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/625/GCA_002112625.1_ASM211262v1	-	R20(2017)
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.29356	54.9	-	BEGC01	218	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089508	GCA_002334505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/505/GCA_002334505.1_ASM233450v1	-	TUM11057
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.20106	64	-	FSFP01	18	5248	5121	12/14/16	3/21/17	Contig	SC	SAMEA2071559	GCA_900134935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/935/GCA_900134935.1_10208_3_35	-	460
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.18441	55	-	FJZZ01	60	5119	4875	4/6/16	3/28/17	Scaffold	SC	SAMEA2273394	GCA_900075995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/075/995/GCA_900075995.1_11983_6_72	-	e1639
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66066	31.4	-	FBCP01	22	1720	1630	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683127	GCA_001490335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/335/GCA_001490335.1_EC3952	-	n/a
Serratia marcescens subsp. marcescens	211759	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	6.26429	58.5	-	LJDU02	348	5958	5632	10/15/15	11/25/16	Contig	University of KwaZulu Natal	SAMN04011428	GCA_001316595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/595/GCA_001316595.2_UNN48_S12v.02	-	950005607
Bordetella pertussis I176	1331272	PRJNA202175	202175	Proteobacteria	Betaproteobacteria	4.04525	67.8	-	AXSG02	33	3942	3508	10/24/13	3/24/17	Contig	JCVI	SAMN02436205	GCA_000479535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/535/GCA_000479535.2_gbp09v01	24356839	I176
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.95537	37.6	-	JUVY01	356	3006	2867	7/10/15	3/26/17	Contig	University of Washington	SAMN03197920	GCA_001058125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/125/GCA_001058125.1_ASM105812v1	26230489	715_EFCM
Neisseria gonorrhoeae	485	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	2.22908	52.4	-	NBTV01	2	2617	2229	4/10/17	4/13/17	Contig	US Food and Drug Administration 	SAMN04875543	GCA_002083025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/025/GCA_002083025.1_ASM208302v1	-	FDAARGOS_206
Enterococcus faecalis EnGen0426	1391496	PRJNA217029	217029	Terrabacteria group	Firmicutes	3.00838	37.4	-	JAIF01	3	3107	2964	1/13/14	3/24/17	Scaffold	Broad Institute	SAMN02333902	GCA_000519945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/945/GCA_000519945.1_Ente_faec_B382_V1	-	EnGen0426
Klebsiella pneumoniae MGH 74	1438797	PRJNA234114	234114	Proteobacteria	Gammaproteobacteria	5.58896	57.2	-	JMZJ01	16	5554	5251	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581247	GCA_000694715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/715/GCA_000694715.1_Kleb_pneu_MGH_74_V1	-	MGH 74
Vibrio parahaemolyticus 3324	1288786	PRJNA188206	188206	Proteobacteria	Gammaproteobacteria	5.0984	45.3	-	AOPA01	88	4915	4675	2/18/15	3/25/17	Contig	NOAA Northwest Fisheries Science Center	SAMN02204309	GCA_000877495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/495/GCA_000877495.1_ASM87749v1	-	3324
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.18583	28.6	-	MOQK01	131	3846	3691	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710874	GCA_002301635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/635/GCA_002301635.1_ASM230163v1	-	5573-CF/ST37
Vibrio cholerae O1 biovar El Tor	686	PRJNA294351	294351	Proteobacteria	Gammaproteobacteria	4.02449	47.5	-	LJFG01	96	3849	3557	9/14/15	3/26/17	Contig	Stavropol Plague Control Reseach Institute	SAMN04023224	GCA_001281595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/595/GCA_001281595.1_ASM128159v1	-	39
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.14855	68.2	-	LWXG01	154	7412	6878	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208622	GCA_001977865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/865/GCA_001977865.1_ASM197786v1	-	INT2-BP127
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.72777	50.7	-	CXOC01	444	5311	4545	7/19/15	2/24/17	Scaffold	SC	SAMEA2057234	GCA_001250675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/675/GCA_001250675.1_9870_7_7	-	144375
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.353	38.3	-	FJCJ01	64	3036	2888	2/20/16	3/27/17	Contig	SC	SAMEA2060000	GCA_900061525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/525/GCA_900061525.1_10771_1_68	-	2531STDY5467349
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.05384	41.2	-	CZFL01	34	2073	1968	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595228	GCA_900009775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/775/GCA_900009775.1_assembly_GD-0036	-	-
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.03857	35.5	-	LCZL01	33	2078	1908	6/1/15	8/8/17	Contig	Novartis Vaccines	SAMN03435073	GCA_001015575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/575/GCA_001015575.1_ASM101557v1	25946017	IT-NI-001
Acinetobacter baumannii TG02017	1315136	PRJNA196255	196255	Proteobacteria	Gammaproteobacteria	3.99966	39	-	ASET01	130	3960	3711	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055497	GCA_000453605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/605/GCA_000453605.1_ASM45360v1	-	TG02017
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.8561	66.2	-	JTME01	87	6566	6363	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105765	GCA_000793445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/445/GCA_000793445.1_AZPAE15068	25367914	AZPAE15068
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.74187	38.3	-	LRHI01	14	1725	1628	5/6/16	3/28/17	Scaffold	Menzies School of Health Research	SAMN03988120	GCA_001638895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/895/GCA_001638895.1_ASM163889v1	-	SST2243-1
Neisseria meningitidis	487	PRJNA329301	329301	Proteobacteria	Betaproteobacteria	2.11271	51.6	-	MCAF01	105	2471	2093	5/18/17	5/24/17	Contig	Oswaldo Cruz Institute	SAMN05437675	GCA_002148485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/485/GCA_002148485.1_ASM214848v1	28487566	Nm292
Helicobacter pylori PZ5024	1337391	PRJNA205197	205197	Proteobacteria	delta/epsilon subdivisions	1.52204	38.3	-	ASYS01	360	1689	1287	8/20/13	3/24/17	Contig	MIT	SAMN02470490	GCA_000448425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/425/GCA_000448425.1_HP_PZ5024	24051318	PZ5024
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.10553	39.6	-	CNNZ02	133	2291	2081	3/23/15	3/11/17	Contig	SC	SAMEA1032640	GCA_001087265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/265/GCA_001087265.2_6925_1_71	-	R34-3053
Arcobacter sp. L	944547	PRJDA61721	61721	Proteobacteria	delta/epsilon subdivisions	2.94766	26.6135	chromosome:NC_017192.1/AP012048.1; plasmid pABL:NC_017193.1/AP012049.1	-	2	2920	2834	9/3/11	4/17/17	Complete Genome	"Center for Computational and Quantitative Life Science, RIKEN"	SAMD00060981	GCA_000284235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/235/GCA_000284235.1_ASM28423v1	22038970	-
Mycobacterium tuberculosis TKK_03_0075	1448417	PRJNA235422	235422	Terrabacteria group	Actinobacteria	4.42405	65.5	-	JJZJ01	5	4295	4104	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585912	GCA_000651775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/775/GCA_000651775.1_Myco_tube_TKK_03_0075_V1	-	TKK_03_0075
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.56156	31.9	-	JUYX01	85	2551	2427	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197843	GCA_001073655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/655/GCA_001073655.1_ASM107365v1	26230489	642_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.6499	35.1	-	MLKK01	185	6190	5727	2/1/17	3/29/17	Scaffold	"OARSA, CFSAN"	SAMN05901942	GCA_001982805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/805/GCA_001982805.1_ASM198280v1	-	MOD1_Bc107
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.10758	37.8	-	JPAS01	29	3205	3103	7/15/14	2/26/17	Contig	Cornell University	SAMN02741579	GCA_000728015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/015/GCA_000728015.1_ASM72801v1	-	FSL R8-6967
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.75507	30.3	-	CULM01	23	1854	1688	3/31/15	3/18/17	Contig	SC	SAMEA1010337	GCA_001229085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/085/GCA_001229085.1_7065_7_14	-	OXC6360
Mycoplasma pulmonis UAB CTIP	272635	PRJNA100	100	Terrabacteria group	Tenericutes	0.963879	26.6	chromosome:NC_002771.1/AL445566.1	-	1	790	745	10/2/01	4/17/17	Complete Genome	Genoscope	SAMEA3138324	GCA_000195875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/875/GCA_000195875.1_ASM19587v1	11353084	UAB CTIP
Staphylococcus aureus M1007	1158707	PRJNA88713	88713	Terrabacteria group	Firmicutes	2.94719	32.8	-	AIYA01	5	3135	2974	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809048	GCA_000362425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/425/GCA_000362425.1_Stap_aure_M1007_V1	-	M1007
Staphylococcus aureus M1010	1158708	PRJNA88715	88715	Terrabacteria group	Firmicutes	2.8828	32.9	-	AIYB01	5	2974	2848	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809049	GCA_000362445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/445/GCA_000362445.1_Stap_aure_M1010_V1	-	M1010
Clostridium taeniosporum	394958	PRJNA339855	339855	Terrabacteria group	Firmicutes	3.50354	26.532	chromosome:NZ_CP017253.1/CP017253.1; plasmid pCt1:NZ_CP017254.1/CP017254.1; plasmid pCt2:NZ_CP017255.1/CP017255.1; plasmid pCt3:NZ_CP017256.1/CP017256.1	-	4	3179	2978	9/20/16	4/17/17	Complete Genome	University of Texas at Austin	SAMN05608059	GCA_001735765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/735/765/GCA_001735765.1_ASM173576v1	-	1/k
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.6856	30.3	-	CUVD01	16	1811	1695	3/31/15	3/18/17	Contig	SC	SAMEA1401325	GCA_001229145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/145/GCA_001229145.1_7213_3_73	-	OXC6618
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09572	37.9	-	JPAH01	19	3146	3046	7/15/14	2/26/17	Contig	Cornell University	SAMN02741568	GCA_000728045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/045/GCA_000728045.1_ASM72804v1	-	FSL R8-6848
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.4814	35.2	-	MLKJ01	135	5934	5569	2/1/17	3/29/17	Scaffold	"OARSA, CFSAN"	SAMN05901943	GCA_001982815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/815/GCA_001982815.1_ASM198281v1	-	MOD1_Bc110
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.3935	31.9	-	JUYW01	94	2328	2251	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197844	GCA_001073675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/675/GCA_001073675.1_ASM107367v1	26230489	643_SEPI
Mycobacterium tuberculosis TKK_03_0083	1448421	PRJNA235426	235426	Terrabacteria group	Actinobacteria	4.40592	65.5	-	JJZI01	4	4293	4105	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585916	GCA_000651795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/795/GCA_000651795.1_Myco_tube_TKK_03_0083_V1	-	TKK_03_0083
Mycoplasma arginini	2094	PRJDB3222	276531	Terrabacteria group	Tenericutes	0.678592	26.4	chromosome Unknown:NZ_AP014657.1/AP014657.1	-	1	615	569	2/25/15	4/11/17	Complete Genome	"National Institute of Animal Health, National Agriculture and Food Research Organization"	SAMD00020876	GCA_001547975.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/975/GCA_001547975.1_ASM154797v1	25883285	HAZ145_1
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.0738	39.7	-	CLNL01	71	2296	2081	3/21/15	3/11/17	Contig	SC	SAMEA1028762	GCA_001087285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/285/GCA_001087285.1_6938_8_21	-	SMRU2733
Helicobacter pylori PZ5026	1337392	PRJNA205198	205198	Proteobacteria	delta/epsilon subdivisions	1.62272	38.7	-	ASYT01	224	1725	1412	8/20/13	3/24/17	Contig	MIT	SAMN02470449	GCA_000448445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/445/GCA_000448445.1_HP_PZ5026	24051318	PZ5026
Neisseria meningitidis	487	PRJNA329301	329301	Proteobacteria	Betaproteobacteria	2.08357	51.6	-	MCAJ01	87	2469	2055	5/18/17	5/24/17	Contig	Oswaldo Cruz Institute	SAMN05437879	GCA_002148505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/505/GCA_002148505.1_ASM214850v1	28487566	Nm322
Streptococcus pyogenes	1314	PRJNA358871	358871	Terrabacteria group	Firmicutes	1.78529	38.4	-	MSMN01	30	1815	1714	1/5/17	3/28/17	Scaffold	National University of Singapore and Genome Institute of Singapore	SAMN06186737	GCA_001937265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/265/GCA_001937265.1_ASM193726v1	-	JS95
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.98074	66	-	JTMD01	128	6694	6441	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105766	GCA_000793455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/455/GCA_000793455.1_AZPAE15069	25367914	AZPAE15069
Acinetobacter baumannii TG02011	1315135	PRJNA196254	196254	Proteobacteria	Gammaproteobacteria	4.04129	38.9	-	ASES01	106	3882	3718	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055496	GCA_000453625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/625/GCA_000453625.1_ASM45362v1	-	TG02011
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.08555	35.3	-	LCXJ01	23	2157	2031	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435075	GCA_001015595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/595/GCA_001015595.1_ASM101559v1	25946017	IT-NI-025
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.27839	41.2	-	CZGF01	83	2337	2164	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595245	GCA_900009785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/785/GCA_900009785.1_assembly_GD-0079	-	-
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.59868	38.3	-	FJCL01	68	3297	3149	2/20/16	3/27/17	Contig	SC	SAMEA2058471	GCA_900061535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/535/GCA_900061535.1_10771_1_70	-	2531STDY5467351
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.71664	50.7	-	CWUR01	453	5422	4485	7/17/15	2/24/17	Scaffold	SC	SAMEA3345046	GCA_001250695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/695/GCA_001250695.1_H14154048001	-	48001ss_1
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.06469	68.2	-	LWXI01	188	7344	6801	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208624	GCA_001977875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/875/GCA_001977875.1_ASM197787v1	-	INT2-BP175
Vibrio cholerae O1 biovar El Tor	686	PRJNA294353	294353	Proteobacteria	Gammaproteobacteria	4.18148	47.5	-	LJFH01	204	4042	3578	9/14/15	3/26/17	Contig	Stavropol Plague Control Reseach Institute	SAMN04023226	GCA_001281615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/615/GCA_001281615.1_ASM128161v1	-	43
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.09921	28.7	-	MOQL01	302	3695	3553	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710875	GCA_002301655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/655/GCA_002301655.1_ASM230165v1	-	5616-DH/ST42
Vibrio parahaemolyticus 12315	1288791	PRJNA188213	188213	Proteobacteria	Gammaproteobacteria	5.09086	45.3	-	AOPF01	110	4903	4668	2/18/15	3/25/17	Contig	NOAA Northwest Fisheries Science Center	SAMN02204314	GCA_000877535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/535/GCA_000877535.1_ASM87753v1	-	12315
Klebsiella pneumoniae MGH 79	1438800	PRJNA234119	234119	Proteobacteria	Gammaproteobacteria	5.76492	57	-	JMZL01	12	5880	5618	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581252	GCA_000694755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/755/GCA_000694755.1_Kleb_pneu_MGH_79_V1	-	MGH 79
Enterococcus faecalis EnGen0427	1391497	PRJNA217030	217030	Terrabacteria group	Firmicutes	3.32994	37.1	-	JAIG01	16	3513	3348	1/13/14	4/10/17	Scaffold	Broad Institute	SAMN02333903	GCA_000519965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/519/965/GCA_000519965.1_Ente_faec_B388_V1	-	EnGen0427
Neisseria gonorrhoeae	485	PRJNA386322	386322	Proteobacteria	Betaproteobacteria	2.13623	52.7	-	NGQH01	122	2584	2246	8/23/17	8/23/17	Contig	UCLA Clinical Microbiology Laboratory	SAMN06929355	GCA_002266825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/825/GCA_002266825.1_ASM226682v1	-	FQ009
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.95616	37.6	-	JUOK01	409	3014	2868	7/10/15	3/26/17	Contig	University of Washington	SAMN03198116	GCA_001059555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/555/GCA_001059555.1_ASM105955v1	26230489	909_EFCM
Bordetella pertussis STO1-CHLA-0006	1331285	PRJNA202188	202188	Proteobacteria	Betaproteobacteria	4.04428	67.8	-	AXSF02	65	3985	3522	10/24/13	3/24/17	Contig	JCVI	SAMN02436200	GCA_000479555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/555/GCA_000479555.2_gbp22v01	24356839	STO1-CHLA-0006
Serratia marcescens subsp. marcescens	211759	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	6.22926	58.5	-	LJDX02	306	5908	5594	10/15/15	11/25/16	Contig	University of KwaZulu Natal	SAMN04011431	GCA_001316635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/635/GCA_001316635.2_7_S3v02	-	9501453777
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.71574	31.3	-	FBED01	38	1786	1680	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683170	GCA_001490375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/375/GCA_001490375.1_SS_2356	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.97986	55.4	-	FKAA01	52	4958	4738	4/5/16	3/28/17	Scaffold	SC	SAMEA2273513	GCA_900076005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/005/GCA_900076005.1_12082_4_66	-	e1655
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.26353	64	-	FSFS01	18	5307	5203	12/14/16	3/21/17	Contig	SC	SAMEA2070902	GCA_900134955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/955/GCA_900134955.1_10208_3_39	-	464
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.26238	54.9	-	BEGD01	184	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089509	GCA_002334525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/525/GCA_002334525.1_ASM233452v1	-	TUM11058
Pseudomonas sp. R21(2017)	1981700	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.21863	64.8	-	NEID01	55	5587	5428	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771374	GCA_002112635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/635/GCA_002112635.1_ASM211263v1	-	R21(2017)
Streptomyces sp. PAN_FS17	1855351	PRJEB16441	349335	Terrabacteria group	Actinobacteria	10.4679	70.8	-	FNTN01	2	9248	8715	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216482	GCA_900105465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/465/GCA_900105465.1_IMG-taxon_2671180174_annotated_assembly	-	PAN_FS17
Streptomyces sp. 2131.1	1855346	PRJEB16388	349308	Terrabacteria group	Actinobacteria	7.48918	71.7	-	FNSY01	3	6769	6350	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216483	GCA_900105515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/515/GCA_900105515.1_IMG-taxon_2671180089_annotated_assembly	-	2131.1
Pseudomonas sp. R17(2017)	1981703	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	5.99008	63.8	-	NEIG01	47	5499	5322	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771371	GCA_002112665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/665/GCA_002112665.1_ASM211266v1	-	R17(2017)
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.26148	55	-	BEGE01	256	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089510	GCA_002334545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/545/GCA_002334545.1_ASM233454v1	-	TUM11059
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.41312	64.1	-	FSFU01	45	5511	5335	12/14/16	3/21/17	Contig	SC	SAMEA2070903	GCA_900134975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/975/GCA_900134975.1_10208_3_42	-	467
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.13288	54.7	-	FKAB01	43	5017	4798	4/5/16	3/28/17	Scaffold	SC	SAMEA2273396	GCA_900076015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/015/GCA_900076015.1_11983_6_74	-	e1676
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.74019	31.1	-	FBEA01	38	1832	1686	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683166	GCA_001490395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/395/GCA_001490395.1_SS_2234	-	n/a
Serratia marcescens subsp. marcescens	211759	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	6.08607	58.7	-	LJEP02	258	5842	5469	10/15/15	11/25/16	Contig	University of KwaZulu Natal	SAMN04011449	GCA_001317085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/085/GCA_001317085.2_45_S21v.02	-	946252515
Bordetella pertussis H939	1331267	PRJNA202170	202170	Proteobacteria	Betaproteobacteria	4.01881	67.7	-	AXSL02	43	3933	3389	10/24/13	4/10/17	Contig	JCVI	SAMN02436203	GCA_000479575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/575/GCA_000479575.2_gbp04v01	24356839	H939
Enterococcus faecium	1352	PRJNA293084	293084	Terrabacteria group	Firmicutes	2.42409	38.1	-	LIHM01	61	2433	2302	9/1/15	3/26/17	Contig	"Bioifnormatik, Biozentrum, Uni Wuerzburg"	SAMN03996886	GCA_001277795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/795/GCA_001277795.1_ASM127779v1	-	GL3
Neisseria gonorrhoeae	485	PRJEB13093	317123	Proteobacteria	Betaproteobacteria	2.10703	52.6	-	FMTC01	76	2491	2160	10/11/16	4/10/17	Contig	GH St Louis-Lariboisiere	SAMEA4463146	GCA_900097075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/075/GCA_900097075.1_ESCNG_PRJEB13093_83BENAI65_wgs.embl	-	-
Enterococcus faecalis 918	1338519	PRJNA205838	205838	Terrabacteria group	Firmicutes	3.31812	37.1	-	AVNY01	111	3551	3347	5/14/14	3/24/17	Scaffold	Washington University	SAMN02777945	GCA_000690925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/925/GCA_000690925.1_ASM69092v1	-	918
Klebsiella pneumoniae UCI 55	1438802	PRJNA234128	234128	Proteobacteria	Gammaproteobacteria	5.75854	57	-	JMZN01	11	5821	5546	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581261	GCA_000694795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/795/GCA_000694795.1_Kleb_pneu_UCI_55_V1	-	UCI 55
Vibrio parahaemolyticus EN9701173	1288796	PRJNA188218	188218	Proteobacteria	Gammaproteobacteria	5.09306	45.3	-	AOPK01	54	4906	4681	2/18/15	3/25/17	Contig	NOAA Northwest Fisheries Science Center	SAMN02204320	GCA_000877555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/555/GCA_000877555.1_ASM87755v1	-	EN9701173
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.04053	28.4	-	MOQM01	50	3671	3548	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710876	GCA_002301675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/675/GCA_002301675.1_ASM230167v1	-	5624-DH/ST42
Vibrio cholerae O1 biovar El Tor	686	PRJNA294352	294352	Proteobacteria	Gammaproteobacteria	4.10514	47.4	-	LJFI01	95	3926	3635	9/14/15	3/26/17	Contig	Stavropol Plague Control Reseach Institute	SAMN04023225	GCA_001281665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/665/GCA_001281665.1_ASM128166v1	-	56
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.22051	68.1	-	LWXJ01	245	7444	6900	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208625	GCA_001977885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/885/GCA_001977885.1_ASM197788v1	-	INT2-BP184
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.51617	50.6	-	CXBL01	440	4821	4217	7/16/15	2/24/17	Scaffold	SC	SAMEA954574	GCA_001250715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/715/GCA_001250715.1_5236_1_10	-	ShIB1970_440736
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.48524	38.3	-	FJCM01	38	3186	3057	2/20/16	3/27/17	Contig	SC	SAMEA2060118	GCA_900061545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/545/GCA_900061545.1_10060_4_71	-	2531STDY5467352
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.04616	41.2	-	CZDL01	37	2055	1948	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595189	GCA_900009865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/865/GCA_900009865.1_assembly_971344	-	-
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.07435	35	-	LCXK01	23	2117	1989	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435076	GCA_001015605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/605/GCA_001015605.1_ASM101560v1	25946017	IT-PW-0057
Acinetobacter baumannii TG15238	1315142	PRJNA196261	196261	Proteobacteria	Gammaproteobacteria	3.92084	39	-	ASEZ01	95	3818	3679	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055503	GCA_000453645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/645/GCA_000453645.1_ASM45364v1	-	TG15238
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.16433	65.9	-	JTMC01	99	6984	6749	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105767	GCA_000793485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/485/GCA_000793485.1_AZPAE15070	25367914	AZPAE15070
Streptococcus pyogenes	1314	PRJNA302716	302716	Terrabacteria group	Firmicutes	1.80739	38.3	-	MLGB01	22	1847	1752	2/1/17	3/29/17	Scaffold	TAILORED-Treatment project	SAMN05912983	GCA_001982765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/765/GCA_001982765.1_ASM198276v1	-	CCUG 33061
Neisseria meningitidis	487	PRJNA329301	329301	Proteobacteria	Betaproteobacteria	2.14062	51.5	-	MCAC01	91	2515	2107	5/18/17	5/24/17	Contig	Oswaldo Cruz Institute	SAMN05437672	GCA_002148525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/525/GCA_002148525.1_ASM214852v1	28487566	Nm56
Helicobacter pylori PZ5056	1337393	PRJNA205199	205199	Proteobacteria	delta/epsilon subdivisions	1.60334	38.7	-	ASYU01	298	1767	1389	8/20/13	3/24/17	Contig	MIT	SAMN02470488	GCA_000448465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/465/GCA_000448465.1_HP_PZ5056	24051318	PZ5056
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.05837	39.5	-	CKVX01	66	2270	2038	3/21/15	3/11/17	Contig	SC	SAMEA1025898	GCA_001087305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/305/GCA_001087305.1_6823_5_1	-	SMRU1945
Spiroplasma culicicola AES-1	1276246	PRJNA184749	184749	Terrabacteria group	Tenericutes	1.17513	26.4	chromosome:NZ_CP006681.1/CP006681.1	-	1	1095	1058	2/7/14	4/17/17	Complete Genome	Academia Sinica	SAMN03081474	GCA_000565175.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/175/GCA_000565175.1_ASM56517v1	24534435	AES-1
Mycobacterium tuberculosis TKK_03_0089	1448426	PRJNA235431	235431	Terrabacteria group	Actinobacteria	4.36916	65.6	-	JJZH01	4	4253	4098	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585921	GCA_000651815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/815/GCA_000651815.1_Myco_tube_TKK_03_0089_V1	-	TKK_03_0089
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.46087	31.9	-	JUYV01	111	2397	2293	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197845	GCA_001073685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/685/GCA_001073685.1_ASM107368v1	26230489	644_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.122	35.3	-	MLKL01	77	5525	5238	2/1/17	3/29/17	Scaffold	"OARSA, CFSAN"	SAMN05901948	GCA_001982845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/845/GCA_001982845.1_ASM198284v1	-	MOD1_Bc98
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.12947	37.7	-	JPAB01	38	3239	3134	7/15/14	2/26/17	Contig	Cornell University	SAMN02741562	GCA_000728055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/055/GCA_000728055.1_ASM72805v1	-	FSL R8-6761
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64026	30.4	-	CUVC01	18	1718	1623	3/31/15	3/18/17	Contig	SC	SAMEA1401353	GCA_001229245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/245/GCA_001229245.1_7213_3_71	-	OXC6615
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121176	1412593	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007270.1/CP007270.2	-	1	4709	4449	4/1/14	4/21/17	Chromosome	LFZ	SAMN02384314	GCA_000623075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/075/GCA_000623075.2_ASM62307v2	24786953	EC20121176
Staphylococcus aureus M1015	1158709	PRJNA88717	88717	Terrabacteria group	Firmicutes	2.94275	33	-	AIYC01	8	3098	2923	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809050	GCA_000362465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/465/GCA_000362465.1_Stap_aure_M1015_V1	-	M1015
Staphylococcus aureus M1016	1158710	PRJNA88719	88719	Terrabacteria group	Firmicutes	2.87335	32.9	-	AIYD01	6	3001	2841	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809051	GCA_000362485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/485/GCA_000362485.1_Stap_aure_M1016_V1	-	M1016
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20093266	1412475	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007274.2/CP007274.2	-	1	4707	4448	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384196	GCA_000623155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/155/GCA_000623155.2_ASM62315v2	24786953	SA20093266
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.7877	30.2	-	CUNH01	17	1899	1798	3/31/15	3/18/17	Contig	SC	SAMEA1010260	GCA_001229325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/325/GCA_001229325.1_7065_7_57	-	OXC6405
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09939	37.8	-	JPAO01	51	3176	3082	7/15/14	2/26/17	Contig	Cornell University	SAMN02741575	GCA_000728065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/065/GCA_000728065.1_ASM72806v1	-	FSL R8-6914
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.983	34.9	-	MLKF01	421	6600	6119	2/1/17	3/29/17	Scaffold	"OARSA, CFSAN"	SAMN05901947	GCA_001982885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/885/GCA_001982885.1_ASM198288v1	-	MOD1_Bc97
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.5468	32	-	JUYM01	156	2485	2390	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197854	GCA_001073765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/765/GCA_001073765.1_ASM107376v1	26230489	652_SEPI
Mycobacterium tuberculosis TKK_03_0090	1448427	PRJNA235432	235432	Terrabacteria group	Actinobacteria	4.42352	65.5	-	JJZG01	5	4299	4100	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585922	GCA_000651835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/835/GCA_000651835.1_Myco_tube_TKK_03_0090_V1	-	TKK_03_0090
Blattabacterium cuenoti BPAA	1229512	PRJDB477	193085	FCB group	Bacteroidetes/Chlorobi group	0.63249	26.4	chromosome:NC_020510.1/AP012548.1	-	1	624	571	3/14/13	4/8/17	Complete Genome	University of the Ryukyus	SAMD00061034	GCA_000348805.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/348/805/GCA_000348805.1_ASM34880v1	23515978	BPAA
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.19299	39.5	-	CLLY01	92	2421	2177	3/21/15	3/11/17	Contig	SC	SAMEA1029116	GCA_001087365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/365/GCA_001087365.1_6938_6_23	-	SMRU2687
Helicobacter pylori PZ5080	1337394	PRJNA205200	205200	Proteobacteria	delta/epsilon subdivisions	1.61378	38.6	-	ASYV01	244	1757	1414	8/20/13	3/24/17	Contig	MIT	SAMN02470470	GCA_000448485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/485/GCA_000448485.1_HP_PZ5080	24051318	PZ5080
Neisseria meningitidis	487	PRJNA329301	329301	Proteobacteria	Betaproteobacteria	2.11097	51.6	-	MCAH01	99	2484	2082	5/18/17	5/24/17	Contig	Oswaldo Cruz Institute	SAMN05437771	GCA_002148545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/545/GCA_002148545.1_ASM214854v1	28487566	Nm638
Streptococcus pyogenes	1314	PRJNA302716	302716	Terrabacteria group	Firmicutes	1.86316	38.4	-	MLGC01	45	1917	1823	2/1/17	3/29/17	Scaffold	TAILORED-Treatment project	SAMN05912995	GCA_001982785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/785/GCA_001982785.1_ASM198278v1	-	CCUG 4207
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.40312	65.8	-	JTMB01	110	7250	6988	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105768	GCA_000793505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/505/GCA_000793505.1_AZPAE15071	25367914	AZPAE15071
Acinetobacter baumannii TG15233	1315138	PRJNA196257	196257	Proteobacteria	Gammaproteobacteria	3.93868	39.1	-	ASEV01	111	3847	3690	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055499	GCA_000453665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/665/GCA_000453665.1_ASM45366v1	-	TG15233
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.0017	35.3	-	LCXL01	23	2066	1936	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435077	GCA_001015615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/615/GCA_001015615.1_ASM101561v1	25946017	IT-PW-0059
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.05534	41.2	-	CZEI01	35	2074	1967	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595174	GCA_900009875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/875/GCA_900009875.1_assembly_6388	-	-
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.34682	38.2	-	FJCN01	19	3039	2912	2/20/16	3/27/17	Contig	SC	SAMEA2060119	GCA_900061555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/555/GCA_900061555.1_10060_4_72	-	2531STDY5467353
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.4851	50.9	-	CXEL01	541	4784	4261	7/16/15	2/24/17	Scaffold	SC	SAMEA954629	GCA_001250735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/735/GCA_001250735.1_5417_1_5	-	20081885_1361371
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.00222	68.3	-	LWXK01	203	7291	6715	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208626	GCA_001977915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/915/GCA_001977915.1_ASM197791v1	-	INT2-BP214
Vibrio cholerae	666	PRJNA285678	285678	Proteobacteria	Gammaproteobacteria	4.06885	47.4	-	LFZZ01	112	3922	3769	9/15/15	3/26/17	Contig	University of maryland	SAMN03839339	GCA_001282605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/605/GCA_001282605.1_ASM128260v1	-	EC-051
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	3.96896	28.5	-	MOPU01	121	3643	3450	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710858	GCA_002301695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/695/GCA_002301695.1_ASM230169v1	-	5538-BK/ST11
Vibrio parahaemolyticus EN9901310	1288797	PRJNA188219	188219	Proteobacteria	Gammaproteobacteria	5.09216	45.3	-	AOPL01	61	4902	4676	2/18/15	3/25/17	Contig	NOAA Northwest Fisheries Science Center	SAMN02204321	GCA_000877565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/565/GCA_000877565.1_ASM87756v1	-	EN9901310
Klebsiella pneumoniae UCI 56	1438803	PRJNA234129	234129	Proteobacteria	Gammaproteobacteria	5.38606	57.3	-	JMZO01	4	5336	5093	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581262	GCA_000694815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/815/GCA_000694815.1_Kleb_pneu_UCI_56_V1	-	UCI 56
Enterococcus faecalis Efa HS0914	1421012	PRJNA227387	227387	Terrabacteria group	Firmicutes	2.81732	37.3	-	JPDQ01	15	2826	2718	7/2/14	3/24/17	Scaffold	"Institute of Antibiotics, Huashan hospital, Fudan University."	SAMN02401940	GCA_000717435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/717/435/GCA_000717435.1_Efa.HS0914.v1.0	25103766	Efa HS0914
Neisseria gonorrhoeae	485	PRJEB13093	317123	Proteobacteria	Betaproteobacteria	2.1493	52.5	-	FMSY01	56	2518	2205	10/11/16	4/10/17	Contig	GH St Louis-Lariboisiere	SAMEA4463148	GCA_900097085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/085/GCA_900097085.1_ESCNG_PRJEB13093_38GANAN12_wgs.embl	-	-
Enterococcus faecium	1352	PRJNA288860	288860	Terrabacteria group	Firmicutes	2.7544	37.5	-	LGAN01	60	2802	2601	9/9/15	3/26/17	Contig	Institute of Experimental Medicine	SAMN03839089	GCA_001280775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/775/GCA_001280775.1_ASM128077v1	26868396	58M
Bordetella pertussis H973	1331268	PRJNA202171	202171	Proteobacteria	Betaproteobacteria	4.01425	67.8	-	AXSK02	62	3943	3480	10/24/13	3/24/17	Contig	JCVI	SAMN02436202	GCA_000479595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/595/GCA_000479595.2_gbp05v01	24356839	H973
Serratia marcescens subsp. marcescens	211759	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	6.25509	58.6	-	LJFD02	289	5960	5643	10/15/15	11/25/16	Contig	University of KwaZulu Natal	SAMN04011464	GCA_001317285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/285/GCA_001317285.2_71_S36v.02	-	950165859
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.72974	31.3	-	FBPV01	39	1784	1694	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683479	GCA_001490415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/415/GCA_001490415.1_H042120298	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.60502	55.1	-	FKAC01	14	4379	4200	4/6/16	3/28/17	Scaffold	SC	SAMEA2273397	GCA_900076025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/025/GCA_900076025.1_11983_6_75	-	e1682
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21746	64.1	-	FSFR01	14	5245	5103	12/14/16	4/2/17	Contig	SC	SAMEA2069134	GCA_900134985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/985/GCA_900134985.1_10208_3_4	-	429
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.25907	55	-	BEGF01	198	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089511	GCA_002334565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/565/GCA_002334565.1_ASM233456v1	-	TUM11060
Pseudomonas sp. R15(2017)	1981705	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.30982	60.5	-	NEII01	34	5733	5582	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771369	GCA_002112685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/685/GCA_002112685.1_ASM211268v1	-	R15(2017)
Streptomyces sp. 2314.4	1881025	PRJEB16391	349305	Terrabacteria group	Actinobacteria	8.3452	71.1	-	FNSJ01	2	7102	6728	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428943	GCA_900105525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/525/GCA_900105525.1_IMG-taxon_2687453781_annotated_assembly	-	2314.4
Streptomyces sp. 2231.1	1855347	PRJEB16460	349396	Terrabacteria group	Actinobacteria	9.26337	71.7	-	FNTO01	3	8567	7931	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216532	GCA_900105605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/605/GCA_900105605.1_IMG-taxon_2671180090_annotated_assembly	-	2231.1
Pseudomonas sp. R11(2017)	1981708	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	5.99099	63.8	-	NEIL01	47	5499	5320	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771366	GCA_002112695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/695/GCA_002112695.1_ASM211269v1	-	R11(2017)
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.24968	55	-	BEGG01	320	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089512	GCA_002334585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/585/GCA_002334585.1_ASM233458v1	-	TUM11061
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21777	64.1	-	FSFV01	25	5256	5106	12/14/16	3/21/17	Contig	SC	SAMEA2071549	GCA_900135005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/005/GCA_900135005.1_10208_3_5	-	430
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.62394	55.7	-	FKAD01	19	4437	4268	4/5/16	3/28/17	Scaffold	SC	SAMEA2273398	GCA_900076035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/035/GCA_900076035.1_11983_6_76	-	e1690
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.53838	31.8	-	FBPX01	20	1546	1483	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683478	GCA_001490435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/435/GCA_001490435.1_P635B	-	n/a
Serratia marcescens subsp. marcescens	211759	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	6.29253	58.6	-	LJFA02	351	5997	5656	10/16/15	11/25/16	Contig	University of KwaZulu Natal	SAMN04011461	GCA_001317445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/445/GCA_001317445.2_67_S33v.02	-	950166381
Bordetella pertussis STO1-SEAT-0004	1331269	PRJNA202172	202172	Proteobacteria	Betaproteobacteria	3.8396	67.9	-	AXSJ02	121	3681	3323	10/24/13	3/24/17	Contig	JCVI	SAMN02436206	GCA_000479615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/615/GCA_000479615.2_gbp06v01	24356839	STO1-SEAT-0004
Enterococcus faecium	1352	PRJNA295857	295857	Terrabacteria group	Firmicutes	2.69692	38	-	LKPH01	113	2819	2527	12/2/15	3/27/17	Contig	IBR	SAMN04090422	GCA_001455425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/425/GCA_001455425.1_ASM145542v1	26847907	GM70
Neisseria gonorrhoeae	485	PRJEB13093	317123	Proteobacteria	Betaproteobacteria	2.19166	52.4	-	FMTB01	86	2564	2230	10/11/16	4/10/17	Contig	GH St Louis-Lariboisiere	SAMEA4463150	GCA_900097095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/095/GCA_900097095.1_ESCNG_PRJEB13093_WHOB_wgs.embl	-	-
Enterococcus faecalis	1351	PRJNA296377	296377	Terrabacteria group	Firmicutes	3.05163	37.1	-	LKGS01	966	3367	2656	10/20/15	3/27/17	Scaffold	Federal University of Rio Grande do Sul	SAMN04100217	GCA_001400065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/065/GCA_001400065.1_ASM140006v1	-	P9-1
Klebsiella pneumoniae UCI 59	1438804	PRJNA234132	234132	Proteobacteria	Gammaproteobacteria	5.43985	57.2	-	JMZP01	7	5518	5283	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581265	GCA_000694835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/835/GCA_000694835.1_Kleb_pneu_UCI_59_V1	-	UCI 59
Vibrio parahaemolyticus 3631	1288788	PRJNA188210	188210	Proteobacteria	Gammaproteobacteria	5.11936	45.2	-	AOPC01	447	4886	4057	2/18/15	3/25/17	Contig	NOAA Northwest Fisheries Science Center	SAMN02204311	GCA_000877595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/595/GCA_000877595.1_ASM87759v1	-	3631
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.33746	29.7	-	MOPV01	550	3798	3643	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710859	GCA_002301705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/705/GCA_002301705.1_ASM230170v1	-	5539-Y/ST2
Vibrio cholerae	666	PRJEB8515	281463	Proteobacteria	Gammaproteobacteria	4.12577	47.8	-	CGHE01	186	3940	3733	4/17/15	3/26/17	Contig	CARDIFF UNIVERSITY	SAMEA3257723	GCA_001292745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/745/GCA_001292745.1_V._cholerae_116-17b	-	-
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.04674	68.3	-	LWXL01	120	7291	6783	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208627	GCA_001977945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/945/GCA_001977945.1_ASM197794v1	-	INT2-BP217
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.73625	50.7	-	CXHJ01	429	5333	4559	7/16/15	2/24/17	Scaffold	SC	SAMEA1324192	GCA_001250755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/755/GCA_001250755.1_7655_8_9	-	H112220292
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.48588	38.3	-	FJCR01	39	3195	3060	2/20/16	3/28/17	Contig	SC	SAMEA2058473	GCA_900061565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/565/GCA_900061565.1_10771_1_76	-	2531STDY5467357
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.04831	41.2	-	CZFB01	33	2061	1954	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595215	GCA_900009885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/885/GCA_900009885.1_assembly_GD-0010	-	-
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.00029	35.2	-	LCXM01	31	2050	1900	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435078	GCA_001015655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/655/GCA_001015655.1_ASM101565v1	25946017	IT-PW-0063
Acinetobacter baumannii TG07725	1315137	PRJNA196256	196256	Proteobacteria	Gammaproteobacteria	3.96117	38.8	-	ASEU01	89	3825	3679	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055498	GCA_000453685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/685/GCA_000453685.1_ASM45368v1	-	TG07725
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.69273	66.2	-	JTSK01	86	6432	6232	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105603	GCA_000793615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/615/GCA_000793615.1_AZPAE14905	25367914	AZPAE14905
Streptococcus pyogenes	1314	PRJNA301788	301788	Terrabacteria group	Firmicutes	1.7775	38.4	-	LNPL01	31	1769	1680	3/3/17	3/6/17	Scaffold	TAILORED-Treatment project	SAMN04278900	GCA_002016575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/575/GCA_002016575.1_ASM201657v1	-	CCUG 25570
Neisseria meningitidis	487	PRJNA329301	329301	Proteobacteria	Betaproteobacteria	2.12525	51.6	-	MCAI01	102	2522	2089	5/18/17	5/24/17	Contig	Oswaldo Cruz Institute	SAMN05437878	GCA_002148555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/555/GCA_002148555.1_ASM214855v1	28487566	Nm94
Helicobacter pylori PZ5086	1337395	PRJNA205201	205201	Proteobacteria	delta/epsilon subdivisions	1.55991	38.8	-	ASYW01	244	1665	1361	8/20/13	3/24/17	Contig	MIT	SAMN02470489	GCA_000448505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/505/GCA_000448505.1_HP_PZ5086	24051318	PZ5086
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.26384	39.5	-	CPPZ01	49	2560	2298	3/23/15	3/11/17	Contig	SC	SAMEA1020022	GCA_001087445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/445/GCA_001087445.1_6732_1_8	-	SN11927
Buchnera aphidicola str. APS (Acyrthosiphon pisum)	107806	PRJNA245	245	Proteobacteria	Gammaproteobacteria	0.655725	26.3523	chromosome:NC_002528.1/BA000003.2; plasmid pLeu:NC_002253.1/AP001071.1; plasmid pTrp:NC_002252.1/AP001070.1	-	3	617	574	9/10/01	10/7/16	Complete Genome	Rikken GSC	SAMD00061095	GCA_000009605.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/009/605/GCA_000009605.1_ASM960v1	10993077	APS
Mycobacterium tuberculosis TKK_03_0092	1448428	PRJNA235433	235433	Terrabacteria group	Actinobacteria	4.41917	65.6	-	JJZF01	3	4295	4115	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585923	GCA_000651855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/855/GCA_000651855.1_Myco_tube_TKK_03_0092_V1	-	TKK_03_0092
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.45178	31.9	-	JUYJ01	144	2426	2312	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197857	GCA_001073795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/795/GCA_001073795.1_ASM107379v1	26230489	655_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.60228	35.2	-	MLKG01	126	6072	5664	2/1/17	3/29/17	Scaffold	"OARSA, CFSAN"	SAMN05901946	GCA_001982895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/895/GCA_001982895.1_ASM198289v1	-	MOD1_Bc99
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.10386	37.8	-	JPAN01	43	3187	3089	7/15/14	2/26/17	Contig	Cornell University	SAMN02741574	GCA_000728105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/105/GCA_000728105.1_ASM72810v1	-	FSL R8-6910
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.7401	30.2	-	CUQJ01	10	1867	1752	3/31/15	3/18/17	Contig	SC	SAMEA1010446	GCA_001229365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/365/GCA_001229365.1_7092_1_43	-	OXC6490
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110223	1412451	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007266.2/CP007266.2	-	1	4707	4452	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384165	GCA_000623175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/175/GCA_000623175.2_ASM62317v2	24786953	EC20110223
Staphylococcus aureus M1034	1169259	PRJNA158767	158767	Terrabacteria group	Firmicutes	2.84166	32.9	-	AOAR01	13	2964	2761	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00839744	GCA_000362505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/505/GCA_000362505.1_Stap_aure_M1034_V1	-	M1034
Staphylococcus aureus M1036	1158711	PRJNA88721	88721	Terrabacteria group	Firmicutes	2.891	32.8	-	AIYE01	10	3029	2857	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809053	GCA_000362525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/525/GCA_000362525.1_Stap_aure_M1036_V1	-	M1036
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120544	1412536	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007362.2/CP007362.2	-	1	4707	4448	4/1/14	3/2/17	Chromosome	LFZ	SAMN02384257	GCA_000623215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/215/GCA_000623215.2_ASM62321v2	24786953	EC20120544
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.68725	30.3	-	CUPP01	15	1770	1647	3/31/15	3/18/17	Contig	SC	SAMEA1010269	GCA_001229445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/445/GCA_001229445.1_7092_1_26	-	OXC6473
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.13662	37.8	-	JPAM01	53	3238	3137	7/15/14	2/26/17	Contig	Cornell University	SAMN02741573	GCA_000728125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/125/GCA_000728125.1_ASM72812v1	-	FSL R8-6908
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.64051	35.2	-	MLKH01	205	6129	5712	2/1/17	3/29/17	Scaffold	"OARSA, CFSAN"	SAMN05901945	GCA_001982925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/925/GCA_001982925.1_ASM198292v1	-	MOD1_Bc105
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.64804	32	-	JUYA01	98	2643	2520	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197866	GCA_001073845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/845/GCA_001073845.1_ASM107384v1	26230489	663_SEPI
Mycobacterium tuberculosis TKK_03_0094	1448430	PRJNA235435	235435	Terrabacteria group	Actinobacteria	4.41141	65.6	-	JJZE01	3	4289	4119	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585925	GCA_000651875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/875/GCA_000651875.1_Myco_tube_TKK_03_0094_V1	-	TKK_03_0094
Blattabacterium cuenoti BPAY	1457031	PRJDB1602	287503	FCB group	Bacteroidetes/Chlorobi group	0.63237	26.3	chromosome:AP014609.1	-	1	623	573	5/31/16	9/28/16	Complete Genome	RIKEN BioResource Center	SAMD00016915	GCA_002355135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/355/135/GCA_002355135.1_ASM235513v1	-	BPAY
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09872	39.6	-	CLCX01	54	2272	2060	3/21/15	3/11/17	Contig	SC	SAMEA1025861	GCA_001087465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/465/GCA_001087465.1_6899_4_19	-	SMRU2035
Helicobacter pylori UM037	1321939	PRJNA212346	212346	Proteobacteria	delta/epsilon subdivisions	1.72366	38.9	-	AUSI01	60	1727	1522	8/20/13	3/24/17	Contig	UM-UNSW-MGRC	SAMN02230260	GCA_000451005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/005/GCA_000451005.1_UM037_R_	24051312	UM037
Neisseria meningitidis	487	PRJNA329301	329301	Proteobacteria	Betaproteobacteria	2.12228	51.5	-	MCAG01	100	2502	2099	5/18/17	5/24/17	Contig	Oswaldo Cruz Institute	SAMN05437686	GCA_002148565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/565/GCA_002148565.1_ASM214856v1	28487566	Nm612
Streptococcus pyogenes	1314	PRJNA382215	382215	Terrabacteria group	Firmicutes	1.95333	38.5	-	NCTM01	38	2058	1910	8/14/17	8/16/17	Scaffold	Shanghai CDC	SAMN06701846	GCA_002250265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/265/GCA_002250265.1_ASM225026v1	28680421	spy0390
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.90015	66.2	-	JTRD01	115	6718	6474	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105636	GCA_000793645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/645/GCA_000793645.1_AZPAE14938	25367914	AZPAE14938
Acinetobacter baumannii TG15236	1315140	PRJNA196259	196259	Proteobacteria	Gammaproteobacteria	4.1498	39.1	-	ASEX01	101	4069	3860	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055501	GCA_000453705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/705/GCA_000453705.1_ASM45370v1	-	TG15236
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.05933	35.4	-	LCXN01	43	2096	1970	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435079	GCA_001015675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/675/GCA_001015675.1_ASM101567v1	25946017	IT-PW-0070
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.04799	41.2	-	CZFA01	35	2067	1953	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595217	GCA_900009895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/895/GCA_900009895.1_assembly_GD-0013	-	-
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.51441	38.3	-	FJCV01	36	3230	3093	2/20/16	3/27/17	Contig	SC	SAMEA2065576	GCA_900061575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/575/GCA_900061575.1_10771_3_12	-	2531STDY5467389
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.65758	50.6	-	CXIJ01	375	5245	4477	7/16/15	2/24/17	Scaffold	SC	SAMEA2003382	GCA_001250775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/775/GCA_001250775.1_8289_7_69	-	85001
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.11942	68.2	-	LWXN01	169	7394	6804	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208629	GCA_001977955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/955/GCA_001977955.1_ASM197795v1	-	INT2-BP241
Vibrio cholerae	666	PRJEB8515	281463	Proteobacteria	Gammaproteobacteria	4.10903	47.6	-	CTBD01	152	3828	3639	4/21/15	3/26/17	Contig	CARDIFF UNIVERSITY	SAMEA3257725	GCA_001292785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/785/GCA_001292785.1_V._cholerae_BRV8	-	-
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.15044	28.5	-	MOQN01	307	3864	3654	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710877	GCA_002301715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/715/GCA_002301715.1_ASM230171v1	-	6583-AH/ST67
Vibrio parahaemolyticus VP766	1288782	PRJNA188199	188199	Proteobacteria	Gammaproteobacteria	5.20397	45.2	-	AOOW01	351	4923	4126	2/18/15	3/25/17	Contig	NOAA Northwest Fisheries Science Center	SAMN02204305	GCA_000877605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/605/GCA_000877605.1_ASM87760v1	-	VP766
Klebsiella pneumoniae UCI 61	1438806	PRJNA234134	234134	Proteobacteria	Gammaproteobacteria	5.63714	57.2	-	JMZQ01	15	5750	5504	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581267	GCA_000694855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/855/GCA_000694855.1_Kleb_pneu_UCI_61_V1	-	UCI 61
Enterococcus faecalis	1351	PRJNA320400	320400	Terrabacteria group	Firmicutes	3.03973	37.6	-	LXID01	68	3125	2985	5/6/16	3/28/17	Scaffold	University of Colorado - Boulder	SAMN04934554	GCA_001639005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/005/GCA_001639005.2_ASM163900v2	27340066	CU0714
Neisseria gonorrhoeae	485	PRJEB13093	317123	Proteobacteria	Betaproteobacteria	2.19568	52.3	-	FMSZ01	67	2574	2232	10/11/16	4/10/17	Contig	GH St Louis-Lariboisiere	SAMEA4463149	GCA_900097115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/115/GCA_900097115.1_ESCNG_PRJEB13093_WHOA_wgs.embl	-	-
Enterococcus faecium	1352	PRJNA295857	295857	Terrabacteria group	Firmicutes	2.88818	38.1	-	LKPI01	180	3050	2702	12/2/15	3/27/17	Contig	IBR	SAMN04090423	GCA_001455435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/435/GCA_001455435.1_ASM145543v1	26847907	GM75
Bordetella pertussis 2250905	1331247	PRJNA202190	202190	Proteobacteria	Betaproteobacteria	3.94018	67.8	-	AXSU02	285	4122	3341	10/24/13	3/24/17	Contig	JCVI	SAMN02436302	GCA_000479635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/635/GCA_000479635.2_gbb51v01	24356839	2250905
Serratia marcescens subsp. marcescens	211759	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	6.2807	58.6	-	LJFB02	304	5958	5647	10/16/15	11/25/16	Contig	University of KwaZulu Natal	SAMN04011462	GCA_001317455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/455/GCA_001317455.2_68_S34v.02	-	950163360
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66006	31.4	-	FBAN01	15	1719	1628	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683085	GCA_001490475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/475/GCA_001490475.1_EC3521	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.76434	55.6	-	FKAE01	32	4634	4450	4/5/16	3/28/17	Scaffold	SC	SAMEA2273399	GCA_900076045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/045/GCA_900076045.1_11983_6_77	-	e1693
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16101	64.2	-	FSFW01	31	5165	5018	12/14/16	3/21/17	Contig	SC	SAMEA2070891	GCA_900135015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/015/GCA_900135015.1_10208_3_6	-	431
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.29747	54.9	-	BEGH01	299	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089513	GCA_002334605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/605/GCA_002334605.1_ASM233460v1	-	TUM11063
Pseudomonas sp. R12(2017)	1981707	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.21576	64.8	-	NEIK01	57	5587	5428	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771367	GCA_002112705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/705/GCA_002112705.1_ASM211270v1	-	R12(2017)
Streptomyces sp. Ag109_O5-10	1855349	PRJEB16475	349381	Terrabacteria group	Actinobacteria	9.4581	71.5	-	FNTQ01	2	8591	8024	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05216533	GCA_900105755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/755/GCA_900105755.1_IMG-taxon_2675902962_annotated_assembly	-	Ag109_O5-10
Streptomyces sp. 2112.3	1881023	PRJEB16474	349382	Terrabacteria group	Actinobacteria	8.08055	71	-	FNTP01	2	7132	6678	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428954	GCA_900105775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/775/GCA_900105775.1_IMG-taxon_2684623030_annotated_assembly	-	2112.3
Pseudomonas sp. B7(2017)	1981712	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.25642	64.7	-	NEIP01	51	5592	5452	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771362	GCA_002112745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/745/GCA_002112745.1_ASM211274v1	-	B7(2017)
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.02313	55.4	-	BEGK01	111	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089516	GCA_002334705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/705/GCA_002334705.1_ASM233470v1	-	TUM11135
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21369	64	-	FVKQ01	18	5259	5150	3/10/17	3/18/17	Contig	SC	SAMEA2071550	GCA_900135025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/025/GCA_900135025.1_10208_3_8	-	433
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.06933	55.1	-	FKAF01	61	5004	4780	4/5/16	3/28/17	Scaffold	SC	SAMEA2273118	GCA_900076055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/055/GCA_900076055.1_11983_5_93	-	e17
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.71594	31.3	-	FAYG01	41	1804	1698	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683014	GCA_001490495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/495/GCA_001490495.1_H110420358	-	n/a
Serratia marcescens	615	PRJNA294719	294719	Proteobacteria	Gammaproteobacteria	5.37896	59.1	-	LNZT01	208	5043	3657	2/23/16	2/23/16	Contig	Universidade Federal do Rio Grande do Sul	SAMN04029106	GCA_001566695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/695/GCA_001566695.1_ASM156669v1	-	3691F
Bordetella pertussis 2356847	1331248	PRJNA202191	202191	Proteobacteria	Betaproteobacteria	3.90702	67.9	-	AXST02	179	3753	3383	10/24/13	3/24/17	Contig	JCVI	SAMN02436301	GCA_000479655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/655/GCA_000479655.2_gbb52v01	24356839	2356847
Enterococcus faecium	1352	PRJNA295857	295857	Terrabacteria group	Firmicutes	2.80039	37.9	-	LKPG01	44	2910	2661	12/2/15	3/27/17	Contig	IBR	SAMN04090424	GCA_001455445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/445/GCA_001455445.1_ASM145544v1	26847907	IQ110
Neisseria gonorrhoeae	485	PRJEB13093	317123	Proteobacteria	Betaproteobacteria	2.16414	52.4	-	FMTA01	61	2535	2215	10/11/16	4/10/17	Contig	GH St Louis-Lariboisiere	SAMEA4463147	GCA_900097135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/135/GCA_900097135.1_ESCNG_PRJEB13093_56GRENE181_wgs.embl	-	-
Enterococcus faecalis	1351	PRJNA379934	379934	Terrabacteria group	Firmicutes	2.96474	37.4	-	NAQY01	42	3031	2864	4/12/17	4/16/17	Scaffold	Loyola University Chicago	SAMN06624014	GCA_002088065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/065/GCA_002088065.1_ASM208806v1	-	ATCC BAA-2128
Klebsiella pneumoniae UCI 62	1438807	PRJNA234135	234135	Proteobacteria	Gammaproteobacteria	5.42743	57.3	-	JMZR01	9	5413	5141	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581268	GCA_000694875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/875/GCA_000694875.1_Kleb_pneu_UCI_62_V1	-	UCI 62
Vibrio parahaemolyticus 3355	1288787	PRJNA188207	188207	Proteobacteria	Gammaproteobacteria	5.11913	45.3	-	AOPB01	381	4896	4028	2/18/15	3/25/17	Contig	NOAA Northwest Fisheries Science Center	SAMN02204310	GCA_000877615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/615/GCA_000877615.1_ASM87761v1	-	3355
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.28761	28.9	-	MOQO01	180	3974	3782	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710878	GCA_002301735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/735/GCA_002301735.1_ASM230173v1	-	6584-AQ/ST26
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.87662	47.6	-	LBCL01	56	3628	3469	10/22/15	3/27/17	Contig	University of Alberta	SAMN03488004	GCA_001402185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/185/GCA_001402185.1_ASM140218v1	26454015	YB1A01
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.05319	68.1	-	LWXM01	185	7331	6740	1/31/17	4/29/17	Contig	Northern Arizona University	SAMN04208628	GCA_001977975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/977/975/GCA_001977975.1_ASM197797v1	-	INT2-BP235
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.76291	50.7	-	CWVV01	393	5397	4585	7/16/15	2/24/17	Scaffold	SC	SAMEA3345090	GCA_001250815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/815/GCA_001250815.1_Sg_201402408_ACTGAT_L001	-	201402408_1
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.64134	38.3	-	FJDF01	43	3347	3195	2/20/16	3/27/17	Contig	SC	SAMEA2060131	GCA_900061585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/585/GCA_900061585.1_10060_4_93	-	2531STDY5467374
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.31309	41.3	-	CZGT01	235	2326	2067	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595257	GCA_900009915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/915/GCA_900009915.1_assembly_GD-0105	-	-
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	1.94101	35.1	-	LCXO01	18	1979	1860	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435080	GCA_001015685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/685/GCA_001015685.1_ASM101568v1	25946017	IT-PW-0085
Acinetobacter baumannii TG00314	1315134	PRJNA196253	196253	Proteobacteria	Gammaproteobacteria	4.05683	39	-	ASER01	55	3874	3653	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055495	GCA_000453725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/725/GCA_000453725.1_ASM45372v1	-	TG00314
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.30831	66.5	-	JTRY01	65	5976	5818	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105615	GCA_000793665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/665/GCA_000793665.1_AZPAE14917	25367914	AZPAE14917
Streptococcus pyogenes	1314	PRJNA382215	382215	Terrabacteria group	Firmicutes	1.93471	38.4	-	NCTL01	39	2022	1889	8/14/17	8/16/17	Scaffold	Shanghai CDC	SAMN06701847	GCA_002250335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/335/GCA_002250335.1_ASM225033v1	28680421	spy0392
Neisseria meningitidis	487	PRJNA329301	329301	Proteobacteria	Betaproteobacteria	2.14698	51.5	-	MCAK01	95	2529	2132	5/18/17	5/24/17	Contig	Oswaldo Cruz Institute	SAMN05437880	GCA_002148605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/605/GCA_002148605.1_ASM214860v1	28487566	NmCRJ2
Helicobacter pylori UM066	1321940	PRJNA212349	212349	Proteobacteria	delta/epsilon subdivisions	1.69416	38.6	-	AUSJ01	34	1647	1483	8/20/13	3/24/17	Contig	UM-UNSW-MGRC	SAMN02230271	GCA_000451025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/025/GCA_000451025.1_UM066_R_	24051312	UM066
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.04805	39.7	-	CLOJ01	51	2254	2041	3/21/15	3/11/17	Contig	SC	SAMEA1029060	GCA_001087485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/485/GCA_001087485.1_6949_1_20	-	SMRU2420
Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)	713603	PRJNA43505	43505	Proteobacteria	Gammaproteobacteria	0.641799	26.3	chromosome:NC_017255.1/CP002300.1	-	1	621	537	11/4/10	3/14/17	Complete Genome	University of York	SAMN02604265	GCA_000183225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/225/GCA_000183225.1_ASM18322v1	21392141	LL01
Mycobacterium tuberculosis TKK_03_0096	1448431	PRJNA235436	235436	Terrabacteria group	Actinobacteria	4.45749	65.4	-	JJZD01	15	4310	4145	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585926	GCA_000651895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/895/GCA_000651895.1_Myco_tube_TKK_03_0096_V1	-	TKK_03_0096
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.40727	32.1	-	JUVK01	70	2342	2236	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197934	GCA_001074075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/075/GCA_001074075.1_ASM107407v1	26230489	73_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.6015	35.1	-	MLKI01	80	6089	5710	2/1/17	3/29/17	Scaffold	"OARSA, CFSAN"	SAMN05901944	GCA_001982935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/935/GCA_001982935.1_ASM198293v1	-	MOD1_Bc106
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.12702	37.7	-	JPAL01	43	3236	3131	7/15/14	2/26/17	Contig	Cornell University	SAMN02741572	GCA_000728135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/135/GCA_000728135.1_ASM72813v1	-	FSL R8-6900
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.71113	30.3	-	CULO01	15	1815	1684	3/31/15	3/18/17	Contig	SC	SAMEA1010333	GCA_001229485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/485/GCA_001229485.1_7065_7_16	-	OXC6362
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120548	1412543	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.6859	52.2	chromosome:NZ_CP007363.2/CP007363.2	-	1	4709	4448	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384264	GCA_000623235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/235/GCA_000623235.2_ASM62323v2	24786953	EC20120548
Staphylococcus aureus M1037	1158712	PRJNA88723	88723	Terrabacteria group	Firmicutes	2.8732	32.8	-	AIYF01	7	3020	2854	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809054	GCA_000362545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/545/GCA_000362545.1_Stap_aure_M1037_V1	-	M1037
Staphylococcus aureus M1044	1169260	PRJNA158769	158769	Terrabacteria group	Firmicutes	2.86218	32.9	-	AOAS01	19	2983	2814	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00839745	GCA_000362565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/565/GCA_000362565.1_Stap_aure_M1044_V1	-	M1044
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120555	1412566	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007364.2/CP007364.2	-	1	4710	4449	4/1/14	3/2/17	Chromosome	LFZ	SAMN02384287	GCA_000623255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/255/GCA_000623255.2_ASM62325v2	24786953	EC20120555
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69418	30.4	-	CUSV01	18	1808	1710	3/31/15	3/18/17	Contig	SC	SAMEA1401112	GCA_001229505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/505/GCA_001229505.1_7213_3_15	-	OXC6558
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.07752	37.9	-	JPAW01	101	3137	3024	7/15/14	2/26/17	Contig	Cornell University	SAMN02741583	GCA_000728145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/145/GCA_000728145.1_ASM72814v1	-	FSL R8-7047
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.24566	35.2	-	MQVP01	70	5657	5344	2/17/17	3/29/17	Scaffold	"OARSA, CFSAN"	SAMN05608064	GCA_002003645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/003/645/GCA_002003645.1_ASM200364v1	-	MOD1_Bc81
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.5562	31.8	-	JUTU01	196	2546	2410	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197976	GCA_001074315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/315/GCA_001074315.1_ASM107431v1	26230489	767_SEPI
Mycobacterium tuberculosis TKK_03_0098	1448432	PRJNA235437	235437	Terrabacteria group	Actinobacteria	4.40112	65.6	-	JJZC01	5	4295	4124	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585927	GCA_000651915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/915/GCA_000651915.1_Myco_tube_TKK_03_0098_V1	-	TKK_03_0098
Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)	713602	PRJNA43507	43507	Proteobacteria	Gammaproteobacteria	0.64177	26.3	chromosome:NC_017252.1/CP002301.1	-	1	621	514	11/4/10	3/14/17	Complete Genome	University of York	SAMN02604266	GCA_000183245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/245/GCA_000183245.1_ASM18324v1	21392141	TLW03
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05908	39.5	-	CNYO02	143	2208	2019	3/22/15	3/11/17	Contig	SC	SAMEA1463212	GCA_001087505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/505/GCA_001087505.2_7553_4_33	-	NP7017
Helicobacter pylori HP87tlpD	1354720	PRJEB4250	217921	Proteobacteria	delta/epsilon subdivisions	1.66447	38.7	-	CBRK01	49	1659	1448	9/2/13	3/24/17	Contig	MHH	SAMEA2272729	GCA_000469985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/469/985/GCA_000469985.1_HP87P7tlpD	23836820	HP87tlpD
Neisseria meningitidis	487	PRJNA369166	369166	Proteobacteria	Betaproteobacteria	2.22301	51	-	MULO01	632	2457	2111	5/22/17	5/24/17	Contig	CHU Bichat	SAMN06277873	GCA_002154965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/965/GCA_002154965.1_ASM215496v1	-	TUR
Streptococcus pyogenes	1314	PRJEB13322	317817	Terrabacteria group	Firmicutes	1.82691	38.4	-	FLKQ01	29	1874	1772	5/19/16	3/28/17	Scaffold	PHE	SAMEA1027094	GCA_900087555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/555/GCA_900087555.1_UK-M3.1	-	-
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.63804	66.2	-	JTRJ01	177	6422	6166	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105630	GCA_000793685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/685/GCA_000793685.1_AZPAE14932	25367914	AZPAE14932
Acinetobacter baumannii TG15237	1315141	PRJNA196260	196260	Proteobacteria	Gammaproteobacteria	3.7825	39	-	ASEY01	67	3689	3540	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055502	GCA_000453745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/745/GCA_000453745.1_ASM45374v1	-	TG15237
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.07909	35.3	-	LCXQ01	27	2151	2018	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435082	GCA_001015695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/695/GCA_001015695.1_ASM101569v1	25946017	IT-PW-055
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.0972	41.1	-	CZDW01	66	2087	1944	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595183	GCA_900009985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/985/GCA_900009985.1_assembly_931260	-	-
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.46545	38.3	-	FJDJ01	41	3187	3064	2/20/16	3/27/17	Contig	SC	SAMEA2065579	GCA_900061595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/595/GCA_900061595.1_10771_3_21	-	2531STDY5467398
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.72086	50.5	-	CXBQ01	439	5072	4561	7/16/15	2/24/17	Scaffold	SC	SAMEA954573	GCA_001250835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/835/GCA_001250835.1_5236_1_9	-	ShIB748_440735
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.14	68.2	-	LWXO01	173	7408	6807	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208630	GCA_001978005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/005/GCA_001978005.1_ASM197800v1	-	INT2-BP264
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	4.01543	47.5	-	LBGE01	44	3804	3616	10/22/15	3/27/17	Contig	University of Alberta	SAMN03488014	GCA_001402285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/285/GCA_001402285.1_ASM140228v1	26454015	YB4C07
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.08165	28.7	-	MOQP01	414	3727	3541	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710879	GCA_002301765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/765/GCA_002301765.1_ASM230176v1	-	6585-DH/ST42
Vibrio parahaemolyticus 49	1288779	PRJNA188195	188195	Proteobacteria	Gammaproteobacteria	5.13169	45.3	-	AONA01	363	4862	3894	2/18/15	3/25/17	Contig	NOAA Northwest Fisheries Science Center	SAMN02204303	GCA_000877625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/625/GCA_000877625.1_ASM87762v1	-	49
Klebsiella pneumoniae UCI 63	1438808	PRJNA234136	234136	Proteobacteria	Gammaproteobacteria	5.58325	57.2	-	JMZS01	12	5653	5416	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581269	GCA_000694895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/895/GCA_000694895.1_Kleb_pneu_UCI_63_V1	-	UCI 63
Enterococcus faecalis	1351	PRJNA386958	386958	Terrabacteria group	Firmicutes	3.00916	37.3	-	NHNF01	27	3051	2898	7/18/17	7/21/17	Scaffold	Hospital Ramon y Cajal	SAMN07136991	GCA_002220885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/885/GCA_002220885.1_ASM222088v1	-	12_Tun
Neisseria gonorrhoeae	485	PRJEB13093	317123	Proteobacteria	Betaproteobacteria	2.1929	52.4	-	FMTD01	277	2574	2158	10/11/16	4/10/17	Contig	GH St Louis-Lariboisiere	SAMEA4463145	GCA_900097145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/145/GCA_900097145.1_ESCNG_PRJEB13093_29NICOL8_wgs.embl	-	-
Enterococcus faecium	1352	PRJNA295857	295857	Terrabacteria group	Firmicutes	3.12551	37.7	-	LKPF01	127	3082	2813	12/2/15	3/27/17	Contig	IBR	SAMN04090421	GCA_001455455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/455/GCA_001455455.1_ASM145545v1	26847907	IQ23
Bordetella pertussis STO1-SEAT-0007	1331253	PRJNA202196	202196	Proteobacteria	Betaproteobacteria	4.05385	67.8	-	AXSQ02	26	3918	3531	10/24/13	3/24/17	Contig	JCVI	SAMN02436248	GCA_000479675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/675/GCA_000479675.2_gbb57v01	24356839	STO1-SEAT-0007
Serratia marcescens	615	PRJNA326847	326847	Proteobacteria	Gammaproteobacteria	4.97556	59.8	-	MAJI01	34	4670	3490	10/11/16	10/11/16	Contig	Olin College	SAMN05293241	GCA_001756295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/295/GCA_001756295.1_ASM175629v1	-	TM
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.64136	31.4	-	FBQK01	19	1691	1600	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683494	GCA_001490515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/515/GCA_001490515.1_H043940500	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.8794	55.4	-	FKAG01	50	4812	4591	4/6/16	3/28/17	Scaffold	SC	SAMEA2273400	GCA_900076065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/065/GCA_900076065.1_11983_6_78	-	e1697
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21633	64	-	FVKP01	15	5259	5156	3/10/17	3/18/17	Contig	SC	SAMEA2070892	GCA_900135055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/055/GCA_900135055.1_10208_3_9	-	434
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.03318	54.7	-	BEGL01	141	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089517	GCA_002334725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/725/GCA_002334725.1_ASM233472v1	-	TUM11136
Pseudomonas sp. B9(2017)	1981710	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	5.56481	63	-	NEIN01	62	5188	4974	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771364	GCA_002112755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/755/GCA_002112755.1_ASM211275v1	-	B9(2017)
Streptomyces sp. 2224.1	1881020	PRJEB16471	349385	Terrabacteria group	Actinobacteria	8.00076	71.1	-	FNSB01	5	7064	6581	10/22/16	7/29/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05428945	GCA_900105915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/915/GCA_900105915.1_IMG-taxon_2687453724_annotated_assembly	-	2224.1
Streptomyces sp. 2114.4	1938836	PRJEB21362	391113	Terrabacteria group	Actinobacteria	8.07423	71	-	FYEY01	2	7178	6704	6/25/17	7/5/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN06272741	GCA_900187385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/385/GCA_900187385.1_IMG-taxon_2731639226_annotated_assembly	-	2114.4
Pseudomonas sp. B6(2017)	1981713	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	7.08691	63.4	-	NEIQ01	81	6588	6386	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771361	GCA_002112765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/765/GCA_002112765.1_ASM211276v1	-	B6(2017)
Enterobacter hormaechei	158836	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.03543	54.7	-	BEGM01	249	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089518	GCA_002334745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/745/GCA_002334745.1_ASM233474v1	-	TUM11137
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21624	64	-	FVKT01	25	5264	5156	3/10/17	3/18/17	Contig	SC	SAMEA2069132	GCA_900135065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/065/GCA_900135065.1_10250_1_83	-	423
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.00223	54.9	-	FKAI01	57	4968	4728	4/6/16	3/28/17	Scaffold	SC	SAMEA2273402	GCA_900076085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/085/GCA_900076085.1_11983_6_80	-	e1713
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.58946	31.7	-	FBQS01	30	1585	1527	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683500	GCA_001490535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/535/GCA_001490535.1_H042280284	-	n/a
Serratia marcescens	615	PRJNA327106	327106	Proteobacteria	Gammaproteobacteria	5.05612	60.1	-	MKYB01	28	-	-	12/22/16	12/22/16	Contig	None	SAMN05509322	GCA_001914155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/155/GCA_001914155.1_ASM191415v1	-	-
Bordetella pertussis STO1-CHLA-0011	1331263	PRJNA202166	202166	Proteobacteria	Betaproteobacteria	4.08335	67.7	-	AXSP02	25	3969	3499	10/24/13	3/24/17	Contig	JCVI	SAMN02436300	GCA_000479695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/695/GCA_000479695.2_gbpv01	24356839	STO1-CHLA-0011
Enterococcus faecium	1352	PRJNA231221	231221	Terrabacteria group	Firmicutes	3.24853	37.6	-	LORO01	8	3352	3005	12/21/15	4/18/17	Contig	US Food and Drug Administration 	SAMN03996282	GCA_001471295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/295/GCA_001471295.1_ASM147129v1	-	FDAARGOS_138
Neisseria gonorrhoeae ATL_2011_01-21	1351784	PRJNA209497	209497	Proteobacteria	Betaproteobacteria	2.11648	52.6	-	ATQI01	304	2456	2144	6/10/15	4/11/17	Scaffold	"Read Laboratory, Emory University"	SAMN02338810	GCA_001025595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/595/GCA_001025595.1_ASM102559v1	-	ATL_2011_01-21
Enterococcus faecalis TUSoD Ef11	553209	PRJNA31415	31415	Terrabacteria group	Firmicutes	2.83665	37.7	-	ACOX02	11	2891	2731	6/3/09	3/22/17	Contig	J. Craig Venter Institute	SAMN00000720	GCA_000175015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/015/GCA_000175015.1_ASM17501v1	-	TUSoD Ef11
Klebsiella pneumoniae UCI 67	1438810	PRJNA234140	234140	Proteobacteria	Gammaproteobacteria	5.74564	57.1	-	JMZT01	12	5874	5610	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581273	GCA_000694915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/915/GCA_000694915.1_Kleb_pneu_UCI_67_V1	-	UCI 67
Vibrio parahaemolyticus 901128	1288792	PRJNA188214	188214	Proteobacteria	Gammaproteobacteria	5.25537	45.2	-	AOPG01	403	4985	4219	2/18/15	3/25/17	Contig	NOAA Northwest Fisheries Science Center	SAMN02204315	GCA_000877675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/675/GCA_000877675.1_ASM87767v1	-	901128
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.06594	28.4	-	MOQQ01	170	3713	3581	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710880	GCA_002301785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/785/GCA_002301785.1_ASM230178v1	-	6588-G/ST8
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	4.03348	47.4	-	LBFX01	63	3878	3681	10/22/15	3/27/17	Contig	University of Alberta	SAMN03488007	GCA_001402375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/375/GCA_001402375.1_ASM140237v1	26454015	YB2A06
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.05987	68.2	-	LWXU01	137	7300	6754	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208636	GCA_001978015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/015/GCA_001978015.1_ASM197801v1	-	Ubon-P19-Bp11
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.80917	50.5	-	CXGV01	442	5444	4585	7/16/15	2/24/17	Scaffold	SC	SAMEA1324246	GCA_001250855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/855/GCA_001250855.1_7655_8_13	-	H112920487
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.43762	38.2	-	FJDY01	47	3145	2983	2/20/16	3/27/17	Contig	SC	SAMEA2065094	GCA_900061605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/605/GCA_900061605.1_10771_3_35	-	2531STDY5467412
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.05209	41.2	-	CZDR01	36	2072	1965	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595173	GCA_900010075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/075/GCA_900010075.1_assembly_6112	-	-
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.00532	35.3	-	LCXP01	37	2098	1932	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435081	GCA_001015735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/735/GCA_001015735.1_ASM101573v1	25946017	IT-PW-0094
Acinetobacter baumannii TG15240	1315144	PRJNA196263	196263	Proteobacteria	Gammaproteobacteria	3.90754	38.9	-	ASFB01	160	3817	3665	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055505	GCA_000453765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/765/GCA_000453765.1_ASM45376v1	-	TG15240
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.39211	66.4	-	JTSI01	87	6062	5870	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105605	GCA_000793705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/705/GCA_000793705.1_AZPAE14907	25367914	AZPAE14907
Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)	713601	PRJNA43509	43509	Proteobacteria	Gammaproteobacteria	0.641716	26.3	chromosome:NC_017253.1/CP002302.1	-	1	621	560	11/4/10	3/14/17	Complete Genome	University of York	SAMN02604267	GCA_000183285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/285/GCA_000183285.1_ASM18328v1	21392141	JF99
Neisseria meningitidis	487	PRJNA369721	369721	Proteobacteria	Betaproteobacteria	2.16692	52.1	-	MULP01	433	2472	2129	5/22/17	5/24/17	Contig	CHU Bichat	SAMN06293011	GCA_002154975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/975/GCA_002154975.1_ASM215497v1	-	CHA
Helicobacter pylori HP87P7tlpDRI	1354721	PRJEB4251	217925	Proteobacteria	delta/epsilon subdivisions	1.66499	38.7	-	CBRL01	46	1656	1450	9/2/13	3/24/17	Contig	MHH	SAMEA2272529	GCA_000470075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/075/GCA_000470075.1_HP87tlpDRI	23836820	HP87tlpDRI
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04778	39.8	-	COFD02	160	2229	2029	3/23/15	3/11/17	Contig	SC	SAMEA1463022	GCA_001087525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/525/GCA_001087525.2_7622_5_73	-	ND6010
Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)	713600	PRJNA43511	43511	Proteobacteria	Gammaproteobacteria	0.641771	26.3	chromosome:NC_017254.1/CP002303.1	-	1	622	399	11/4/10	3/14/17	Complete Genome	University of York	SAMN02604268	GCA_000183305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/305/GCA_000183305.1_ASM18330v1	21392141	JF98
Mycobacterium tuberculosis TKK_03_0099	1448433	PRJNA235438	235438	Terrabacteria group	Actinobacteria	4.40085	65.6	-	JJZB01	5	4267	4120	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585928	GCA_000651935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/935/GCA_000651935.1_Myco_tube_TKK_03_0099_V1	-	TKK_03_0099
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.62896	32	-	JUSM01	76	2603	2467	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198010	GCA_001074435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/435/GCA_001074435.1_ASM107443v1	26230489	798_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.31869	35.2	-	MQTC01	60	5744	5453	3/6/17	3/8/17	Scaffold	"OARSA, CFSAN"	SAMN05608077	GCA_002021355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/355/GCA_002021355.1_ASM202135v1	-	MOD1_Bc90
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09508	37.9	-	JPAU01	18	3148	3044	7/15/14	2/26/17	Contig	Cornell University	SAMN02741581	GCA_000728185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/185/GCA_000728185.1_ASM72818v1	-	FSL R8-7020
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.71456	30.3	-	CUKA01	12	1807	1707	3/31/15	3/18/17	Contig	SC	SAMEA1010642	GCA_001229545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/545/GCA_001229545.1_7038_3_65	-	OXC6315
Salmonella enterica subsp. enterica serovar Enteritidis str. SA19982831	1412502	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68577	52.2	chromosome:NZ_CP007289.2/CP007289.2	-	1	4718	4452	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384223	GCA_000623415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/415/GCA_000623415.2_ASM62341v2	24786953	SA19982831
Staphylococcus aureus M1061	1169261	PRJNA158771	158771	Terrabacteria group	Firmicutes	2.93132	33	-	AOAT01	11	3049	2883	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00839746	GCA_000362585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/585/GCA_000362585.1_Stap_aure_M1061_V1	-	M1061
Staphylococcus aureus M1062	1169262	PRJNA158773	158773	Terrabacteria group	Firmicutes	2.85222	32.9	-	AOAU01	8	2999	2838	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00839747	GCA_000362605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/605/GCA_000362605.1_Stap_aure_M1062_V1	-	M1062
Salmonella enterica subsp. enterica serovar Enteritidis str. SA19983126	1412498	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007290.2/CP007290.2	-	1	4712	4450	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384219	GCA_000623435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/435/GCA_000623435.2_ASM62343v2	24786953	SA19983126
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.62957	30.5	-	CUPU01	13	1699	1605	3/31/15	3/18/17	Contig	SC	SAMEA1010676	GCA_001229645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/645/GCA_001229645.1_7092_1_3	-	OXC6449
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.10093	37.7	-	JPAY01	27	3188	3102	7/15/14	2/26/17	Contig	Cornell University	SAMN02741585	GCA_000728205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/205/GCA_000728205.1_ASM72820v1	-	FSL R8-7097
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.44967	35.1	-	MQTD01	108	5887	5550	3/6/17	3/8/17	Scaffold	"OARSA, CFSAN"	SAMN05608079	GCA_002021375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/375/GCA_002021375.1_ASM202137v1	-	MOD1_Bc88
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.6352	31.9	-	JUSK01	86	2601	2470	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198012	GCA_001074445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/445/GCA_001074445.1_ASM107444v1	26230489	8_SEPI
Mycobacterium tuberculosis TKK_03_0100	1448434	PRJNA235439	235439	Terrabacteria group	Actinobacteria	4.41625	65.5	-	JJZA01	5	4307	4104	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585929	GCA_000651955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/955/GCA_000651955.1_Myco_tube_TKK_03_0100_V1	-	TKK_03_0100
Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)	561501	PRJNA31223	31223	Proteobacteria	Gammaproteobacteria	0.641895	26.3	chromosome:NC_011834.1/CP001158.1	-	1	622	577	1/6/09	3/14/17	Complete Genome	University of Arizona	SAMN02604133	GCA_000021065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/065/GCA_000021065.1_ASM2106v1	19150844	Tuc7
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.0418	39.6	-	CLMA01	58	2260	2041	3/21/15	3/11/17	Contig	SC	SAMEA1029003	GCA_001087585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/585/GCA_001087585.1_6938_6_3	-	SMRU2667
Helicobacter pylori HP87hu	1354718	PRJEB4248	217922	Proteobacteria	delta/epsilon subdivisions	1.63776	38.9	-	CBRI01	72	1641	1437	9/2/13	3/24/17	Contig	MHH	SAMEA2272409	GCA_000470135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/135/GCA_000470135.1_HP87hu	23836820	HP87hu
Neisseria meningitidis	487	PRJNA395141	395141	Proteobacteria	Betaproteobacteria	2.09126	51.8	-	NOKU01	151	2468	2036	8/22/17	8/22/17	Contig	Christian Medical College	SAMN07372014	GCA_002265135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/135/GCA_002265135.1_ASM226513v1	-	BA3030
Buchnera aphidicola str. 5A (Acyrthosiphon pisum)	563178	PRJNA31225	31225	Proteobacteria	Gammaproteobacteria	0.642122	26.3	chromosome:NC_011833.1/CP001161.1	-	1	622	576	1/6/09	3/14/17	Complete Genome	University of Arizona	SAMN02604134	GCA_000021085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/085/GCA_000021085.1_ASM2108v1	19150844	5A
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.08723	66.4	-	JTNN01	66	5787	5627	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105730	GCA_000793725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/725/GCA_000793725.1_AZPAE15033	25367914	AZPAE15033
Acinetobacter baumannii TG15241	1315145	PRJNA196264	196264	Proteobacteria	Gammaproteobacteria	3.90976	38.9	-	ASFC01	139	3781	3642	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055506	GCA_000453785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/785/GCA_000453785.1_ASM45378v1	-	TG15241
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.11058	35.3	-	LCXU01	24	2181	2048	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435086	GCA_001015755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/755/GCA_001015755.1_ASM101575v1	25946017	294206
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.28142	41.2	-	CZEP01	73	2336	2159	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595210	GCA_900010085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/085/GCA_900010085.1_assembly_GD-0002	-	-
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.36996	38.2	-	FJEF01	17	3079	2976	2/20/16	3/28/17	Contig	SC	SAMEA2065102	GCA_900061615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/615/GCA_900061615.1_10771_3_62	-	2531STDY5467439
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.89279	50.7	-	CWVQ01	402	5493	4728	7/16/15	2/24/17	Scaffold	SC	SAMEA3345083	GCA_001250875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/875/GCA_001250875.1_Sg_201401463_GTCCGC_L001	-	201401463_1
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.05414	68.2	-	LWXW01	136	7309	6770	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208638	GCA_001978045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/045/GCA_001978045.1_ASM197804v1	-	Ubon-P19-Bp34
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.88485	47.7	-	LBGK01	51	3604	3456	10/22/15	3/27/17	Contig	University of Alberta	SAMN03488020	GCA_001402445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/445/GCA_001402445.1_ASM140244v1	26454015	YB6A06
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.0515	28.5	-	MOQR01	95	3669	3547	9/14/17	9/18/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710881	GCA_002301805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/805/GCA_002301805.1_ASM230180v1	-	6589-DH/ST42
Vibrio parahaemolyticus EN2910	1288793	PRJNA188215	188215	Proteobacteria	Gammaproteobacteria	5.09288	45.3	-	AOPH01	49	4905	4680	2/18/15	3/25/17	Contig	NOAA Northwest Fisheries Science Center	SAMN02204317	GCA_000877685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/685/GCA_000877685.1_ASM87768v1	-	EN2910
Klebsiella pneumoniae UCI 68	1438811	PRJNA234141	234141	Proteobacteria	Gammaproteobacteria	5.42229	57.3	-	JMZU01	11	5429	5161	5/19/14	2/21/17	Scaffold	Broad Institute	SAMN02581274	GCA_000694935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/935/GCA_000694935.1_Kleb_pneu_UCI_68_V1	-	UCI 68
Enterococcus faecalis PC1.1	791166	PRJNA42751	42751	Terrabacteria group	Firmicutes	2.75392	37.6	-	ADKN01	79	2764	2656	4/8/10	3/22/17	Contig	J. Craig Venter Institute	SAMN00014269	GCA_000178175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/175/GCA_000178175.1_ASM17817v1	23469340	PC1.1
Neisseria gonorrhoeae ATL_2011_05-13	1351787	PRJNA209501	209501	Proteobacteria	Betaproteobacteria	2.08969	52.6	-	ATQL01	260	2435	2117	6/10/15	4/11/17	Scaffold	"Read Laboratory, Emory University"	SAMN02338813	GCA_001025615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/615/GCA_001025615.1_ASM102561v1	-	ATL_2011_05-13
Enterococcus faecium	1352	PRJNA306525	306525	Terrabacteria group	Firmicutes	2.9462	37.6	-	LPWB01	287	3046	2900	12/22/15	3/27/17	Contig	Walter Reed Army Institute of Research	SAMN04351372	GCA_001481405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/405/GCA_001481405.1_ASM148140v1	-	MRSN33034
Bordetella pertussis STO1-SEAT-0006	1331252	PRJNA202195	202195	Proteobacteria	Betaproteobacteria	4.02842	67.8	-	AXSR02	49	3938	3541	10/24/13	3/24/17	Contig	JCVI	SAMN02436249	GCA_000479715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/715/GCA_000479715.2_gbb56v01	24356839	STO1-SEAT-0006
Serratia marcescens	615	PRJEB16676	352359	Proteobacteria	Gammaproteobacteria	5.8651	58.3	-	FNXV01	174	-	-	11/3/16	11/3/16	Contig	JLU	SAMEA4524858	GCA_900108825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/825/GCA_900108825.1_SM1890	-	-
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.9036	30.9	-	FAXW01	40	2010	1872	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683022	GCA_001490555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/555/GCA_001490555.1_H104860240	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.8471	55	-	FKAJ01	44	4739	4481	4/6/16	3/28/17	Scaffold	SC	SAMEA2273403	GCA_900076095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/095/GCA_900076095.1_12082_4_51	-	e1714
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21387	64	-	FVKO01	21	5262	5152	3/10/17	3/18/17	Contig	SC	SAMEA2070792	GCA_900135075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/075/GCA_900135075.1_10250_1_82	-	422
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.04766	55.3	-	BEGN01	86	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089519	GCA_002334765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/765/GCA_002334765.1_ASM233476v1	-	TUM11139
Pseudomonas sp. B5(2017)	1981714	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	5.88501	63.4	-	NEIR01	50	5463	5266	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771360	GCA_002112825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/825/GCA_002112825.1_ASM211282v1	-	B5(2017)
Streptomyces sp. CNH189	1136432	PRJNA169772	169772	Terrabacteria group	Actinobacteria	7.32732	72.3	-	AZUS01	61	6710	6371	1/3/14	3/9/17	Scaffold	DOE Joint Genome Institute	SAMN02597197	GCA_000527195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/195/GCA_000527195.1_ASM52719v1	-	CNH189
Streptomyces sp. PCS3-D2	1460244	PRJNA236535	236535	Terrabacteria group	Actinobacteria	7.47979	72	-	JDUZ01	27	6677	6351	4/7/14	3/9/17	Scaffold	National Institute of Molecular Biology and Biotechnology	SAMN02597788	GCA_000612545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/612/545/GCA_000612545.1_P1-1	24926046	PCS3-D2
Pseudomonas sp. B40(2017)	1981716	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.16075	60.8	-	NEIT01	15	5655	5537	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771358	GCA_002112855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/855/GCA_002112855.1_ASM211285v1	-	B40(2017)
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.13611	55.3	-	BEGQ01	115	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089522	GCA_002334825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/825/GCA_002334825.1_ASM233482v1	-	TUM11142
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21363	64	-	FSFY01	14	5261	5152	12/14/16	3/21/17	Contig	SC	SAMEA2071547	GCA_900135085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/085/GCA_900135085.1_10250_1_84	-	424
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.65587	55.4	-	FKAK01	38	4544	4344	4/6/16	3/28/17	Scaffold	SC	SAMEA2273405	GCA_900076105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/105/GCA_900076105.1_11983_6_82	-	e1718
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.6603	31.4	-	FAZG01	22	1721	1631	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683036	GCA_001490575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/575/GCA_001490575.1_EC3389	-	n/a
Serratia marcescens	615	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.91829	58.7	-	JVEJ01	448	-	-	7/10/15	7/13/16	Scaffold	University of Washington	SAMN03197701	GCA_001065275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/275/GCA_001065275.1_ASM106527v1	26230489	508_SMAR
Bordetella pertussis 2371640	1331249	PRJNA202192	202192	Proteobacteria	Betaproteobacteria	3.90461	67.9	-	AXSS02	193	3837	3313	10/24/13	3/24/17	Contig	JCVI	SAMN02436204	GCA_000479735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/735/GCA_000479735.2_gbb53v01	24356839	2371640
Enterococcus faecium	1352	PRJNA309427	309427	Terrabacteria group	Firmicutes	3.63164	37.7	-	LRHK01	11	3867	3479	2/2/16	3/27/17	Contig	brown University/Rhode Island Hospital	SAMN04390118	GCA_001544055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/055/GCA_001544055.1_ASM154405v1	-	D344RRF x C68
Neisseria gonorrhoeae MIA_2011_05-15	1351792	PRJNA209510	209510	Proteobacteria	Betaproteobacteria	2.13335	52.4	-	ATQQ01	252	2458	2167	6/10/15	4/11/17	Scaffold	"Read Laboratory, Emory University"	SAMN02338817	GCA_001025655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/655/GCA_001025655.1_ASM102565v1	-	MIA_2011_05-15
Enterococcus faecalis OG1X	1027372	PRJNA66377	66377	Terrabacteria group	Firmicutes	2.73907	37.7	-	AFHH01	78	2710	2554	12/12/12	3/23/17	Contig	"Bumgarner laboratory, Department of Microbiology, University of Washington"	SAMN02471974	GCA_000320305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/320/305/GCA_000320305.1_ASM32030v1	23104812	OG1X
Klebsiella pneumoniae UCI 17	1400170	PRJNA219267	219267	Proteobacteria	Gammaproteobacteria	5.73358	57.1	-	JNVF01	4	5794	5476	6/13/14	2/21/17	Scaffold	Broad Institute	SAMN02356597	GCA_000706585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/585/GCA_000706585.1_Kleb_pneu_UCI_17_V1	-	UCI 17
Vibrio parahaemolyticus EN9701072	1288794	PRJNA188216	188216	Proteobacteria	Gammaproteobacteria	4.96623	45.3	-	AOPI01	425	4720	3859	2/18/15	3/25/17	Contig	NOAA Northwest Fisheries Science Center	SAMN02204318	GCA_000877715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/715/GCA_000877715.1_ASM87771v1	-	EN9701072
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.17295	28.5	-	MOQW01	113	3889	3725	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710885	GCA_002301835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/835/GCA_002301835.1_ASM230183v1	-	6595-AL/ST58
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.9166	47.6	-	LBGD01	62	3697	3530	10/22/15	3/27/17	Contig	University of Alberta	SAMN03488013	GCA_001402605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/605/GCA_001402605.1_ASM140260v1	26454015	YB4B03
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.05421	68.3	-	LWYC01	143	7313	6756	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208644	GCA_001978055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/055/GCA_001978055.1_ASM197805v1	-	Ubon-P23-Bp38
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.60142	50.7	-	CWYT01	372	5103	4396	7/17/15	2/24/17	Scaffold	SC	SAMEA2445725	GCA_001250955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/955/GCA_001250955.1_12971_8_39	-	H103560477
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.41642	38.2	-	FJEE01	12	3113	3022	2/20/16	3/27/17	Contig	SC	SAMEA2065101	GCA_900061625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/625/GCA_900061625.1_10771_3_59	-	2531STDY5467436
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.32381	41	-	CZFN01	99	2400	2215	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595231	GCA_900010095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/095/GCA_900010095.1_assembly_GD-0051	-	-
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.14485	35.3	-	LCXS01	32	2217	2086	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435084	GCA_001015765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/765/GCA_001015765.1_ASM101576v1	25946017	B848
Acinetobacter baumannii TG15242	1315146	PRJNA196265	196265	Proteobacteria	Gammaproteobacteria	3.88637	39	-	ASFD01	88	3733	3610	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055507	GCA_000453805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/805/GCA_000453805.1_ASM45380v1	-	TG15242
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.88276	66.1	-	JTRV01	104	6631	6410	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105618	GCA_000793745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/745/GCA_000793745.1_AZPAE14920	25367914	AZPAE14920
Streptobacillus moniliformis DSM 12112	519441	PRJNA29309	29309	Fusobacteria	Fusobacteriia	1.67328	26.2655	chromosome:NC_013515.1/CP001779.1; plasmid pSMON01:NC_013516.1/CP001780.1	-	2	1540	1436	11/16/09	3/30/17	Complete Genome	US DOE Joint Genome Institute (JGI-PGF)	SAMN00002603	GCA_000024565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/024/565/GCA_000024565.1_ASM2456v1	21304670	DSM 12112
Neisseria meningitidis	487	PRJNA400487	400487	Proteobacteria	Betaproteobacteria	2.32271	51.3	-	NTLY01	9	2799	2321	9/17/17	9/19/17	Contig	Centers for Disease Control	SAMN07615713	GCA_002307415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/415/GCA_002307415.1_ASM230741v1	28505234	M26503
Helicobacter pylori HP87P7	1354719	PRJEB4249	217924	Proteobacteria	delta/epsilon subdivisions	1.66457	38.7	-	CBRJ01	46	1652	1434	9/2/13	3/24/17	Contig	MHH	SAMEA2272152	GCA_000470355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/470/355/GCA_000470355.1_HP87P7	23836820	HP87P7
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.01292	39.7	-	CKRN01	54	2208	1937	3/21/15	3/11/17	Contig	SC	SAMEA1024930	GCA_001087665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/665/GCA_001087665.1_6680_7_4	-	SMRU964
Candidatus Portiera aleyrodidarum MED (Bemisia tabaci)	1163752	PRJNA312470	312470	Proteobacteria	Gammaproteobacteria	0.352068	26.2	chromosome:NZ_CP016304.1/CP016304.1	-	1	302	262	9/5/17	9/7/17	Complete Genome	Cornell University	SAMN05292330	GCA_002285875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/875/GCA_002285875.1_ASM228587v1	-	MEAM1
Mycobacterium tuberculosis TKK_03_0101	1448435	PRJNA235440	235440	Terrabacteria group	Actinobacteria	4.44243	65.5	-	JJYZ01	6	4285	4118	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585930	GCA_000651975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/975/GCA_000651975.1_Myco_tube_TKK_03_0101_V1	-	TKK_03_0101
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.44991	32	-	JURD01	70	2421	2280	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198045	GCA_001074555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/555/GCA_001074555.1_ASM107455v1	26230489	838_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.38394	35.1	-	MQTE01	68	5879	5525	3/6/17	3/8/17	Scaffold	"OARSA, CFSAN"	SAMN05608046	GCA_002021385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/385/GCA_002021385.1_ASM202138v1	-	MOD1_Bc122
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	2.889	37.9	-	JPAV01	18	2900	2812	7/15/14	2/26/17	Contig	Cornell University	SAMN02741582	GCA_000728215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/215/GCA_000728215.1_ASM72821v1	-	FSL R8-7043
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.7096	30.4	-	CUNA01	14	1812	1709	3/31/15	3/18/17	Contig	SC	SAMEA1010646	GCA_001229665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/665/GCA_001229665.1_7065_7_51	-	OXC6397
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20083456	1412506	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007293.2/CP007293.2	-	1	4709	4447	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384227	GCA_000623495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/495/GCA_000623495.2_ASM62349v2	24786953	SA20083456
Staphylococcus aureus M1063	1158463	PRJNA88729	88729	Terrabacteria group	Firmicutes	2.96941	33.1	-	AIYI01	11	3122	2938	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809083	GCA_000362625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/625/GCA_000362625.1_Stap_aure_M1063_V1	-	M1063
Staphylococcus aureus M1064	1158465	PRJNA88733	88733	Terrabacteria group	Firmicutes	2.98046	32.9	-	AIYK01	12	3141	2979	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809092	GCA_000362645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/645/GCA_000362645.1_Stap_aure_M1064_V1	-	M1064
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20083636	1412490	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68566	52.2	chromosome:NZ_CP007294.2/CP007294.2	-	1	4763	4501	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384211	GCA_000623515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/515/GCA_000623515.2_ASM62351v2	24786953	SA20083636
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.65707	30.5	-	CUNS01	14	1742	1638	3/31/15	3/18/17	Contig	SC	SAMEA1010664	GCA_001229685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/685/GCA_001229685.1_7065_7_67	-	OXC6415
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	2.94939	37.9	-	JPAX01	18	3011	2910	7/15/14	2/26/17	Contig	Cornell University	SAMN02741584	GCA_000728245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/245/GCA_000728245.1_ASM72824v1	-	FSL R8-7057
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.58116	35	-	MQTF01	236	5908	5527	3/6/17	3/8/17	Scaffold	"OARSA, CFSAN"	SAMN05608082	GCA_002021435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/435/GCA_002021435.1_ASM202143v1	-	MOD1_Bc83
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.53814	31.8	-	JUPY01	115	2481	2386	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198076	GCA_001074715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/715/GCA_001074715.1_ASM107471v1	26230489	87_SEPI
Mycobacterium tuberculosis TKK_03_0103	1448437	PRJNA235442	235442	Terrabacteria group	Actinobacteria	4.419	65.6	-	JJYX01	7	4291	4115	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585932	GCA_000651995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/651/995/GCA_000651995.1_Myco_tube_TKK_03_0103_V1	-	TKK_03_0103
Candidatus Portiera aleyrodidarum BT-QVLC	1239881	PRJNA175143	175143	Proteobacteria	Gammaproteobacteria	0.350928	26.2	chromosome:NC_018676.1/CP003867.1	-	1	301	259	9/28/12	3/30/17	Complete Genome	"IGSB, Department of Human Genetics"	SAMN02603358	GCA_000300035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/035/GCA_000300035.1_ASM30003v1	23144417	BT-QVLC
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05376	39.6	-	CNVY02	202	2242	2037	3/23/15	3/11/17	Contig	SC	SAMEA1032565	GCA_001087705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/705/GCA_001087705.2_7001_1_12	-	R34-3089
Helicobacter pylori CG-IMSS-2012	1292040	PRJNA188779	188779	Proteobacteria	delta/epsilon subdivisions	1.59905	39	-	AWUL01	45	1592	1336	9/30/13	8/8/17	Contig	INSTITUTO POLITECNICO NACIONAL	SAMN02471329	GCA_000472305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/305/GCA_000472305.1_CGIMSS2012	24459275	CG-IMSS-2012
Neisseria meningitidis	487	PRJNA384053	384053	Proteobacteria	Betaproteobacteria	2.02503	51.9	-	NGAN01	205	-	-	9/20/17	9/22/17	Contig	Harvard T.H. Chan School of Public Health	SAMN06827270	GCA_002318055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/055/GCA_002318055.1_ASM231805v1	28904187	NmUS03x2
Streptococcus pyogenes ABC020046230	1439139	PRJNA232974	232974	Terrabacteria group	Firmicutes	1.58921	38.2	-	JJJN01	7	1584	1520	4/14/14	4/14/14	Scaffold	Broad Institute	SAMN02567323	GCA_000631965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/631/965/GCA_000631965.1_Stre_pyog_ABC020046230_V1	-	ABC020046230
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.35919	66.4	-	JTRK01	61	6030	5873	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105629	GCA_000793765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/765/GCA_000793765.1_AZPAE14931	25367914	AZPAE14931
Acinetobacter baumannii TG2012	1315147	PRJNA196266	196266	Proteobacteria	Gammaproteobacteria	3.84123	39	-	ASFE01	48	3691	3553	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055508	GCA_000453825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/825/GCA_000453825.1_ASM45382v1	-	TG2012
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.04188	35.2	-	LCXR01	20	2096	1980	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435083	GCA_001015775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/775/GCA_001015775.1_ASM101577v1	25946017	090R_799
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.21739	41.2	-	CZGL01	70	2287	2121	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595249	GCA_900010195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/195/GCA_900010195.1_assembly_GD-0087	-	-
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.36508	38.3	-	FJEK01	30	3089	2958	2/20/16	3/27/17	Contig	SC	SAMEA2064377	GCA_900061635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/635/GCA_900061635.1_10771_3_49	-	2531STDY5467426
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.73253	50.7	-	CXKW01	383	5357	4566	7/16/15	2/24/17	Scaffold	SC	SAMEA2004903	GCA_001250975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/975/GCA_001250975.1_8290_4_56	-	109310
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.19812	68.1	-	LWYE01	160	7460	6917	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208646	GCA_001978085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/085/GCA_001978085.1_ASM197808v1	-	Ubon-P44-Bp11
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	4.03289	47.4	-	LBFY01	64	3873	3680	10/22/15	3/27/17	Contig	University of Alberta	SAMN03488008	GCA_001411585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/585/GCA_001411585.1_ASM141158v1	26454015	YB2G01
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.00765	28.5	-	MOQX01	563	3730	3515	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710884	GCA_002301845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/845/GCA_002301845.1_ASM230184v1	-	6594-G/ST8
Vibrio parahaemolyticus EN9701121	1288795	PRJNA188217	188217	Proteobacteria	Gammaproteobacteria	5.10731	45.2	-	AOPJ01	378	4852	4063	2/18/15	3/25/17	Contig	NOAA Northwest Fisheries Science Center	SAMN02204319	GCA_000877725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/725/GCA_000877725.1_ASM87772v1	-	EN9701121
Klebsiella pneumoniae BIDMC 10	1328404	PRJNA202012	202012	Proteobacteria	Gammaproteobacteria	5.82271	57	-	JNVG01	13	5904	5643	6/13/14	2/21/17	Scaffold	Broad Institute	SAMN02138631	GCA_000706605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/605/GCA_000706605.1_Kleb_pneu_BIDMC_10_V2	-	BIDMC 10
Enterococcus faecalis M7	1111677	PRJNA76595	76595	Terrabacteria group	Firmicutes	2.7332	37.7	-	AGVN01	77	2712	2535	12/12/12	3/23/17	Contig	"Bumgarner laboratory, Department of Microbiology, University of Washington"	SAMN02471995	GCA_000320325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/320/325/GCA_000320325.1_ASM32032v1	23104812	M7
Neisseria gonorrhoeae NOR_2011_03-06	1351794	PRJNA209514	209514	Proteobacteria	Betaproteobacteria	2.11801	52.5	-	ATQS01	285	2434	2146	6/10/15	4/11/17	Scaffold	"Read Laboratory, Emory University"	SAMN02338820	GCA_001025685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/685/GCA_001025685.1_ASM102568v1	-	NOR_2011_03-06
Enterococcus faecium NBRC 100486	1218090	PRJDB263	172086	Terrabacteria group	Firmicutes	2.48485	38.1	-	BCQD01	38	2523	2376	1/28/16	3/27/17	Contig	National Institute of Technology and Evaluation	SAMD00045730	GCA_001544255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/255/GCA_001544255.1_ASM154425v1	-	NBRC 100486
Bordetella pertussis STO1-CHOC-0017	1331277	PRJNA202180	202180	Proteobacteria	Betaproteobacteria	4.0502	67.8	-	AXRZ02	108	3961	3366	10/24/13	4/10/17	Contig	JCVI	SAMN02436243	GCA_000479755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/755/GCA_000479755.2_gbp14v01	24356839	STO1-CHOC-0017
Serratia marcescens	615	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.85916	59.7	-	DCSY01	54	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06455512	GCA_002325865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/865/GCA_002325865.1_ASM232586v1	28894102	-
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.74858	31.2	-	FBLH01	82	1808	1693	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683358	GCA_001490595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/595/GCA_001490595.1_SWAN337	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.65386	55.4	-	FKAL01	30	4537	4341	4/6/16	3/28/17	Scaffold	SC	SAMEA2273406	GCA_900076115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/115/GCA_900076115.1_11983_6_83	-	e1719
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.04628	64.2	-	FSGB01	26	5043	4897	12/14/16	3/21/17	Contig	SC	SAMEA2071447	GCA_900135105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/105/GCA_900135105.1_10250_1_9	-	349
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.13611	55.3	-	BEGR01	115	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089523	GCA_002334845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/845/GCA_002334845.1_ASM233484v1	-	TUM11143
Pseudomonas sp. B34(2017)	1981723	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.2734	60.7	-	NEJA01	15	5680	5534	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771351	GCA_002112915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/915/GCA_002112915.1_ASM211291v1	-	B34(2017)
Streptomyces sp. AcH 505	352211	PRJNA254113	254113	Terrabacteria group	Actinobacteria	9.00579	69.3	-	JTIY01	27	8028	7233	1/15/15	3/11/17	Scaffold	Helmholtz-Centre for Environmental Research - UFZ	SAMN02899864	GCA_000818175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/175/GCA_000818175.1_ASM81817v1	25838498	AcH 505
Streptomyces sp. 150FB	1576605	PRJNA268284	268284	Terrabacteria group	Actinobacteria	9.80394	69.4	-	JTHL01	8	8562	7705	1/15/15	3/11/17	Scaffold	Helmholtz-Centre for Environmental Research - UFZ	SAMN03217757	GCA_000818195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/195/GCA_000818195.1_Streptomyces_species_150FB_genome_v1	25838499	150FB
Pseudomonas sp. B32(2017)	1981725	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.27314	60.7	-	NEJC01	15	5678	5532	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771349	GCA_002112925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/925/GCA_002112925.1_ASM211292v1	-	B32(2017)
Enterobacter hormaechei subsp. steigerwaltii	299766	PRJDB6127	397288	Proteobacteria	Gammaproteobacteria	5.29806	54.8	-	BEGS01	149	-	-	8/24/17	9/23/17	Scaffold	Toho University	SAMD00089524	GCA_002334865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/334/865/GCA_002334865.1_ASM233486v1	-	TUM11144
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.07856	64.3	-	FSGA01	23	5027	4897	12/14/16	3/21/17	Contig	SC	SAMEA1965061	GCA_900135115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/115/GCA_900135115.1_10625_4_19	-	19
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.08998	55.4	-	FKAM01	54	5107	4871	4/6/16	3/28/17	Scaffold	SC	SAMEA2273407	GCA_900076125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/125/GCA_900076125.1_11983_6_84	-	e1720
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.6596	31.4	-	FAYP01	29	1714	1626	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683017	GCA_001490615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/615/GCA_001490615.1_H132760749	-	n/a
Bordetella pertussis STO1-CHOC-0018	1331278	PRJNA202181	202181	Proteobacteria	Betaproteobacteria	4.05157	67.8	-	AXRY02	127	3983	3370	10/24/13	4/17/17	Contig	JCVI	SAMN02436242	GCA_000479775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/775/GCA_000479775.2_gbp15v01	24356839	STO1-CHOC-0018
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.17947	37.7	-	LNLI01	180	3404	2993	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270928	GCA_001545495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/495/GCA_001545495.1_ASM154549v1	-	VRE-1300900
Neisseria gonorrhoeae MU_NG4	1351799	PRJNA209616	209616	Proteobacteria	Betaproteobacteria	2.07138	52.6	-	ATQX01	338	2364	2112	6/10/15	4/11/17	Scaffold	"Read Laboratory, Emory University"	SAMN02338825	GCA_001025705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/705/GCA_001025705.1_ASM102570v1	-	MU_NG4
Enterococcus faecalis 10244	1327994	PRJNA198772	198772	Terrabacteria group	Firmicutes	3.11229	37.339	plasmid pEF10244:NZ_ASWX01000006.1/ASWX01000006.1	ASWX01	79	3214	3068	7/12/13	3/24/17	Contig	Research Institute of Physical-Chemical Medicine	SAMN02470829	GCA_000438765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/438/765/GCA_000438765.1_ASM43876v1	-	10244
Klebsiella pneumoniae BIDMC 33B	1329843	PRJNA202045	202045	Proteobacteria	Gammaproteobacteria	5.8786	57	-	JNVK01	10	5909	5604	6/13/14	2/21/17	Scaffold	Broad Institute	SAMN02138664	GCA_000707985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/985/GCA_000707985.1_Kleb_pneu_BIDMC_33B_V1	-	BIDMC 33B
Vibrio parahaemolyticus 3644	1288789	PRJNA188211	188211	Proteobacteria	Gammaproteobacteria	5.02853	45.3	-	AOPD01	411	4781	3968	2/18/15	3/25/17	Contig	NOAA Northwest Fisheries Science Center	SAMN02204312	GCA_000877755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/755/GCA_000877755.1_ASM87775v1	-	3644
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.46313	29.3	-	MOQV01	399	4129	3902	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710886	GCA_002301855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/855/GCA_002301855.1_ASM230185v1	-	6596-D/ST9
Vibrio cholerae	666	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.21607	47.5	-	LOSM01	7	4157	3837	12/21/15	3/27/17	Contig	US Food and Drug Administration 	SAMN03996319	GCA_001471455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/455/GCA_001471455.1_ASM147145v1	-	ATCC 11629
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.18405	68.1	-	LWYF01	193	7446	6873	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208647	GCA_001978105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/105/GCA_001978105.1_ASM197810v1	-	Ubon-P44-Bp26
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.73312	50.8	-	CXJT01	400	5322	4559	7/16/15	2/24/17	Scaffold	SC	SAMEA2003912	GCA_001250995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/995/GCA_001250995.1_8290_4_31	-	98904
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.3651	38.3	-	FJEJ01	30	3082	2955	2/20/16	3/27/17	Contig	SC	SAMEA2064385	GCA_900061645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/645/GCA_900061645.1_10771_3_76	-	2531STDY5467453
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	1.97752	41.3	-	CZDK01	38	1986	1878	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595178	GCA_900010245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/245/GCA_900010245.1_assembly_870040	-	-
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	1.97989	35.2	-	LCXT01	19	2025	1889	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435085	GCA_001015815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/815/GCA_001015815.1_ASM101581v1	25946017	290183
Acinetobacter baumannii TG2013	1315148	PRJNA196267	196267	Proteobacteria	Gammaproteobacteria	4.23857	39	-	ASFF01	77	4135	3906	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055509	GCA_000453845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/845/GCA_000453845.1_ASM45384v1	-	TG2013
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.89247	65.9	-	JTRE01	105	6650	6401	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105635	GCA_000793785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/785/GCA_000793785.1_AZPAE14937	25367914	AZPAE14937
Streptococcus pyogenes M49 591	294934	PRJNA13286	13286	Terrabacteria group	Firmicutes	1.32768	38.3	-	AAFV01	295	-	-	12/23/04	1/8/14	Contig	"Department of Medical Microbiology and Hospital Hygiene, University Hospital Rostock, Germany"	SAMN02469731	GCA_000167435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/435/GCA_000167435.1_ASM16743v1	-	M49 591
Neisseria meningitidis	487	PRJNA384053	384053	Proteobacteria	Betaproteobacteria	2.10079	51.8	-	NGAO01	216	-	-	9/20/17	9/22/17	Contig	Harvard T.H. Chan School of Public Health	SAMN06827269	GCA_002318065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/065/GCA_002318065.1_ASM231806v1	28904187	NmUS03x1
Helicobacter pylori SA170A	1345577	PRJEB4088	216045	Proteobacteria	delta/epsilon subdivisions	1.60787	39.2	-	CBMZ01	64	1590	1404	9/21/13	3/24/17	Contig	MHH	SAMEA2271951	GCA_000475435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/435/GCA_000475435.1_SA170A	23898187	SA170A
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.01907	39.7	-	COEV02	122	2229	2014	3/23/15	3/6/17	Contig	SC	SAMEA1462983	GCA_001087745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/745/GCA_001087745.2_7622_5_60	-	MD5090
Candidatus Portiera aleyrodidarum BT-B-HRs	1206109	PRJNA175094	175094	Proteobacteria	Gammaproteobacteria	0.351658	26.2	chromosome:NC_018677.1/CP003868.1	-	1	303	261	9/28/12	3/30/17	Complete Genome	"IGSB, Department of Human Genetics"	SAMN02603335	GCA_000300075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/075/GCA_000300075.1_ASM30007v1	23144417	BT-B
Mycobacterium tuberculosis TKK_03_0105	1448439	PRJNA235444	235444	Terrabacteria group	Actinobacteria	4.41015	65.5	-	JJYW01	31	4295	4111	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585934	GCA_000652015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/015/GCA_000652015.1_Myco_tube_TKK_03_0105_V1	-	TKK_03_0105
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.44027	31.9	-	JUYK01	192	2425	2311	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197856	GCA_001074865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/865/GCA_001074865.1_ASM107486v1	26230489	654_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.3324	35	-	MQTG01	80	5672	5326	3/6/17	3/8/17	Scaffold	"OARSA, CFSAN"	SAMN05608050	GCA_002021445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/445/GCA_002021445.1_ASM202144v1	-	MOD1_Bc71
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.10686	37.8	-	JPAZ01	48	3186	3082	7/15/14	2/26/17	Contig	Cornell University	SAMN02741586	GCA_000728265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/265/GCA_000728265.1_ASM72826v1	-	FSL R8-7107
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.83115	30.2	-	CUIO01	43	1977	1800	3/31/15	3/18/17	Contig	SC	SAMEA1010677	GCA_001229825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/825/GCA_001229825.1_7038_3_31	-	OXC6281
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20084384	1412477	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68639	52.2	chromosome:NZ_CP007295.2/CP007295.2	-	1	4713	4451	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384198	GCA_000623535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/535/GCA_000623535.2_ASM62353v2	24786953	SA20084384
Staphylococcus aureus M1068	1169263	PRJNA158775	158775	Terrabacteria group	Firmicutes	2.87855	32.8	-	AOAV01	7	3018	2861	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00839748	GCA_000362665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/665/GCA_000362665.1_Stap_aure_M1068_V1	-	M1068
Staphylococcus aureus M1076	1158464	PRJNA88731	88731	Terrabacteria group	Firmicutes	2.91276	32.9	-	AIYJ01	6	3056	2896	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809091	GCA_000362685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/685/GCA_000362685.1_Stap_aure_M1076_V1	-	M1076
Salmonella enterica subsp. enterica serovar Enteritidis str. SA19930684	1412500	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007277.2/CP007277.2	-	1	4707	4448	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384221	GCA_000623555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/555/GCA_000623555.2_ASM62355v2	24786953	SA19930684
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.6336	30.5	-	CURK01	12	1727	1626	3/31/15	3/18/17	Contig	SC	SAMEA1010599	GCA_001229945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/945/GCA_001229945.1_7092_1_68	-	OXC6515
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.1172	37.9	-	JPBA01	26	3174	3088	7/15/14	2/26/17	Contig	Cornell University	SAMN02741587	GCA_000728275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/275/GCA_000728275.1_ASM72827v1	-	FSL R8-7121
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.24883	35.1	-	MQTH01	64	5581	5298	3/6/17	3/8/17	Scaffold	"OARSA, CFSAN"	SAMN05608040	GCA_002021455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/455/GCA_002021455.1_ASM202145v1	-	MOD1_Bc73
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.53879	31.9	-	JUYI01	201	2547	2408	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197858	GCA_001074895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/895/GCA_001074895.1_ASM107489v1	26230489	656_SEPI
Mycobacterium tuberculosis TKK_03_0106	1448440	PRJNA235445	235445	Terrabacteria group	Actinobacteria	4.42702	65.6	-	JJYV01	7	4294	4123	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585935	GCA_000652035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/035/GCA_000652035.1_Myco_tube_TKK_03_0106_V1	-	TKK_03_0106
Candidatus Portiera aleyrodidarum BT-B-HRs	1206109	PRJNA169905	169905	Proteobacteria	Gammaproteobacteria	0.358242	26.2	chromosome:NC_018507.1/CP003708.1	-	1	303	264	8/22/12	3/30/17	Complete Genome	Yale University	SAMN02604336	GCA_000292685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/685/GCA_000292685.1_ASM29268v1	22977066	BT-B
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.09962	39.6	-	CLNN01	74	2342	2111	3/21/15	3/11/17	Contig	SC	SAMEA1028747	GCA_001087785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/785/GCA_001087785.1_6938_8_22	-	SMRU2734
Helicobacter pylori SA45A	1345533	PRJEB4053	216000	Proteobacteria	delta/epsilon subdivisions	1.63853	39	-	CBNB01	56	1615	1437	9/21/13	3/24/17	Contig	MHH	SAMEA2271971	GCA_000475455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/455/GCA_000475455.1_SA45A	23898187	SA45A
Neisseria meningitidis	487	PRJNA384053	384053	Proteobacteria	Betaproteobacteria	2.14979	51.6	-	NGAM01	205	-	-	9/20/17	9/22/17	Contig	Harvard T.H. Chan School of Public Health	SAMN06827271	GCA_002318075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/075/GCA_002318075.1_ASM231807v1	28904187	NmUS04x1
Streptococcus pyogenes GA40634	1115814	PRJNA78611	78611	Terrabacteria group	Firmicutes	1.84437	38.3	-	AURU01	49	1947	1922	8/5/13	11/19/13	Contig	J. Craig Venter Institute	SAMN00828756	GCA_000444015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/015/GCA_000444015.1_SpyogGA40634v01	-	GA40634
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.81557	66.2	-	JTSH01	107	6491	6304	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105606	GCA_000793805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/805/GCA_000793805.1_AZPAE14908	25367914	AZPAE14908
Acinetobacter baumannii TG2014	1315149	PRJNA196268	196268	Proteobacteria	Gammaproteobacteria	4.23117	39	-	ASFG01	64	4143	3974	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055510	GCA_000453865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/865/GCA_000453865.1_ASM45386v1	-	TG2014
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.11012	35.3	-	LCXV01	32	2198	2035	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435087	GCA_001015835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/835/GCA_001015835.1_ASM101583v1	25946017	299693
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.09858	41.1	-	CZEE01	62	2085	1946	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595197	GCA_900010255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/255/GCA_900010255.1_assembly_2051729	-	-
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.36432	38.3	-	FJEL01	27	3084	2958	2/20/16	3/27/17	Contig	SC	SAMEA2065727	GCA_900061655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/655/GCA_900061655.1_10771_3_78	-	2531STDY5467455
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.69653	50.7	-	CWYY01	381	5214	4504	7/16/15	2/24/17	Scaffold	SC	SAMEA2445734	GCA_001251015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/015/GCA_001251015.1_12971_8_46	-	H112220292
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.19911	68.1	-	LWYD01	178	7470	6905	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208645	GCA_001978115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/115/GCA_001978115.1_ASM197811v1	-	Ubon-P44-Bp10
Vibrio cholerae	666	PRJNA307219	307219	Proteobacteria	Gammaproteobacteria	3.96919	47.9	-	LQBW01	285	3686	3351	1/14/16	4/11/17	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN04376920	GCA_001515095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/095/GCA_001515095.1_ASM151509v1	-	ME-7
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.05034	28.9	-	MOQU01	917	3869	3543	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710887	GCA_002301895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/895/GCA_002301895.1_ASM230189v1	-	6597-AL/ST58
Vibrio parahaemolyticus 3646	1288790	PRJNA188212	188212	Proteobacteria	Gammaproteobacteria	5.11024	45.2	-	AOPE01	410	4863	4012	2/18/15	3/25/17	Contig	NOAA Northwest Fisheries Science Center	SAMN02204313	GCA_000877765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/765/GCA_000877765.1_ASM87776v1	-	3646
Klebsiella pneumoniae	573	PRJNA254180	254180	Proteobacteria	Gammaproteobacteria	5.53737	57.2	-	JPGT01	181	5599	5408	8/8/14	2/21/17	Scaffold	Walter Reed Army Institute of Research	SAMN02900563	GCA_000738865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/865/GCA_000738865.1_ASM73886v1	-	MRSN8157
Enterococcus faecalis E12	1115807	PRJNA78597	78597	Terrabacteria group	Firmicutes	2.98348	37.2	-	AWPI01	117	3104	2948	9/19/13	3/24/17	Contig	J. Craig Venter Institute	SAMN00828801	GCA_000468775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/775/GCA_000468775.1_EfaecE12v1.0	-	E12
Neisseria gonorrhoeae MU_NG15	1351807	PRJNA209640	209640	Proteobacteria	Betaproteobacteria	2.09645	52.4	-	ATRE01	339	2373	2128	6/10/15	3/26/17	Scaffold	"Read Laboratory, Emory University"	SAMN02338832	GCA_001025715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/715/GCA_001025715.1_ASM102571v1	-	MU_NG15
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.08628	37.9	-	LNLJ01	247	3280	2949	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270929	GCA_001545535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/535/GCA_001545535.1_ASM154553v1	-	VRE-1300911
Bordetella pertussis STO1-CHOC-0008	1331273	PRJNA202176	202176	Proteobacteria	Betaproteobacteria	3.8346	67.9	-	AXRV02	124	3662	3332	10/24/13	3/24/17	Contig	JCVI	SAMN02436297	GCA_000479795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/795/GCA_000479795.2_gbp10v01	24356839	STO1-CHOC-0008
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.74935	31.3	-	FBLX01	64	1783	1666	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683374	GCA_001490655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/655/GCA_001490655.1_UNOR9553d	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.9596	55.2	-	FKAQ01	48	4910	4646	4/6/16	3/28/17	Scaffold	SC	SAMEA2273514	GCA_900076135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/135/GCA_900076135.1_12082_4_67	-	e1772
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23046	64.2	-	FSGE01	32	5235	5094	12/14/16	3/21/17	Contig	SC	SAMEA2070158	GCA_900135125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/125/GCA_900135125.1_10625_4_23	-	23
Pseudomonas sp. B30(2017)	1981727	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.27245	60.7	-	NEJE01	21	5679	5534	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771347	GCA_002112995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/112/995/GCA_002112995.1_ASM211299v1	-	B30(2017)
Streptomyces sp. WM6386	1415558	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.21588	70.4	-	JXTE01	856	8465	7839	4/15/15	8/27/17	Scaffold	University of Illinois	SAMN03295681	GCA_000972385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/385/GCA_000972385.1_ASM97238v1	-	WM6386
Streptomyces sp. WM6391	1415559	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.55828	72.2	-	JXWX01	242	8015	7558	4/15/15	8/27/17	Scaffold	University of Illinois	SAMN03317180	GCA_000972395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/395/GCA_000972395.1_ASM97239v1	-	WM6391
Pseudomonas sp. B28(2017)	1981730	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	5.93696	59.9	-	NEJH01	31	5525	5330	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771344	GCA_002113025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/025/GCA_002113025.1_ASM211302v1	-	B28(2017)
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.74347	64.1	-	FVKR01	57	5956	5737	3/10/17	3/18/17	Contig	SC	SAMEA2071181	GCA_900135135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/135/GCA_900135135.1_10625_4_22	-	22
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.80921	55.3	-	FKAO01	40	4739	4485	4/6/16	3/28/17	Scaffold	SC	SAMEA2273412	GCA_900076145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/145/GCA_900076145.1_11983_6_88	-	e1770
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66491	31.3	-	FBFF01	19	1717	1632	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683197	GCA_001490675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/675/GCA_001490675.1_EC4238	-	n/a
Bordetella pertussis STO1-CHOC-0021	1331280	PRJNA202183	202183	Proteobacteria	Betaproteobacteria	4.02748	67.8	-	AXRW02	56	3961	3512	10/24/13	3/24/17	Contig	JCVI	SAMN02436298	GCA_000479815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/815/GCA_000479815.2_gbp17v01	24356839	STO1-CHOC-0021
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.05341	38	-	LNLO01	273	3238	2929	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270934	GCA_001545545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/545/GCA_001545545.1_ASM154554v1	-	VRE-1400373
Neisseria gonorrhoeae SK33414	1351775	PRJNA209466	209466	Proteobacteria	Betaproteobacteria	2.28932	52	-	ATPY01	80	2840	2311	6/10/15	4/11/17	Scaffold	"Read Laboratory, Emory University"	SAMN02338802	GCA_001025875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/875/GCA_001025875.1_ASM102587v1	-	SK33414
Enterococcus faecalis EnGen0286	1158672	PRJNA89073	89073	Terrabacteria group	Firmicutes	2.92362	37.5	-	AJET01	12	2971	2840	5/3/13	3/24/17	Contig	Broad Institute	SAMN00809234	GCA_000478325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/325/GCA_000478325.1_Ente_faec_T15_V1	-	T15
Klebsiella pneumoniae	573	PRJNA254180	254180	Proteobacteria	Gammaproteobacteria	5.54352	57.2	-	JPGS01	184	5617	5413	8/8/14	2/21/17	Scaffold	Walter Reed Army Institute of Research	SAMN02900562	GCA_000738875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/875/GCA_000738875.1_ASM73887v1	25092708	MRSN6920
Vibrio parahaemolyticus	670	PRJNA272927	272927	Proteobacteria	Gammaproteobacteria	5.23348	45.2	-	JXUZ01	77	5064	4822	2/20/15	3/25/17	Contig	Health Canada	SAMN03287765	GCA_000878565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/565/GCA_000878565.1_ASM87856v1	25838480	Oct-98
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.14285	28.5	-	MOQT01	102	3817	3665	9/14/17	9/18/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710888	GCA_002301905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/905/GCA_002301905.1_ASM230190v1	-	6599-NonSp/ST103
Vibrio cholerae	666	PRJNA307225	307225	Proteobacteria	Gammaproteobacteria	3.99583	47.5	-	LQBX01	123	3819	3302	1/14/16	8/8/17	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN04376926	GCA_001515115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/115/GCA_001515115.1_ASM151511v1	-	M988
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.20768	68.1	-	LWYG01	148	7447	6916	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208648	GCA_001978125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/125/GCA_001978125.1_ASM197812v1	-	Ubon-P44-Bp34
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.82187	50.7	-	CWVJ01	390	5452	4646	7/17/15	2/24/17	Scaffold	SC	SAMEA3345075	GCA_001251035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/035/GCA_001251035.1_Sg_201400752_GATCAG_L001	-	201400752_1
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.36334	38.3	-	FJEN01	27	3086	2958	2/20/16	3/27/17	Contig	SC	SAMEA1965976	GCA_900061665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/665/GCA_900061665.1_10771_3_81	-	2531STDY5467458
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.33914	41.2	-	CZGH01	75	2433	2244	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595248	GCA_900010275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/275/GCA_900010275.1_assembly_GD-0085	-	-
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.00162	35.3	-	LCXW01	18	2046	1921	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435088	GCA_001015845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/845/GCA_001015845.1_ASM101584v1	25946017	309185
Acinetobacter baumannii TG20277	1315150	PRJNA196269	196269	Proteobacteria	Gammaproteobacteria	4.1105	39.2	-	ASFH01	62	4001	3786	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055511	GCA_000453885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/885/GCA_000453885.1_ASM45388v1	-	TG20277
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.81541	66	-	JTRU01	143	6521	6289	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105619	GCA_000793825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/825/GCA_000793825.1_AZPAE14921	25367914	AZPAE14921
Streptococcus pyogenes GA41345	1115813	PRJNA78609	78609	Terrabacteria group	Firmicutes	1.79104	38.4	-	AUOY01	110	1972	1935	8/5/13	11/19/13	Contig	J. Craig Venter Institute	SAMN00828759	GCA_000444035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/035/GCA_000444035.1_SpyogGA41345v1.0	-	GA41345
Neisseria meningitidis	487	PRJNA384053	384053	Proteobacteria	Betaproteobacteria	2.07858	51.9	-	NGAP01	186	-	-	9/20/17	9/22/17	Contig	Harvard T.H. Chan School of Public Health	SAMN06827268	GCA_002318085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/085/GCA_002318085.1_ASM231808v1	28904187	NmUS02x1
Helicobacter pylori SA233A	1345522	PRJEB4121	216073	Proteobacteria	delta/epsilon subdivisions	1.57854	38.7	-	CBMX01	49	1535	1402	9/21/13	3/24/17	Contig	MHH	SAMEA2272061	GCA_000475475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/475/GCA_000475475.1_SA233A	23898187	SA233A
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.03881	39.7	-	CNXF02	136	2207	2022	3/23/15	3/5/17	Contig	SC	SAMEA1032749	GCA_001087865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/865/GCA_001087865.2_7001_3_13	-	R34-3149
Candidatus Portiera aleyrodidarum MED (Bemisia tabaci)	1163752	PRJNA80995	80995	Proteobacteria	Gammaproteobacteria	0.357461	26.1	chromosome:NZ_CP007563.1/CP007563.1	-	1	304	263	1/23/15	4/2/17	Complete Genome	Zhejiang University	SAMN02712578	GCA_000827855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/827/855/GCA_000827855.1_ASM82785v1	-	BT-Q
Mycobacterium tuberculosis TKK_03_0108	1448442	PRJNA235447	235447	Terrabacteria group	Actinobacteria	4.39699	65.6	-	JJYU01	57	4300	4113	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585937	GCA_000652055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/055/GCA_000652055.1_Myco_tube_TKK_03_0108_V1	-	TKK_03_0108
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.59379	32	-	JUUA01	109	2585	2468	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197970	GCA_001074955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/955/GCA_001074955.1_ASM107495v1	26230489	761_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.68442	35	-	MQTI01	318	6009	5631	3/6/17	3/8/17	Scaffold	"OARSA, CFSAN"	SAMN05608075	GCA_002021465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/465/GCA_002021465.1_ASM202146v1	-	MOD1_Bc92
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.05603	37.8	-	JPBD01	31	3120	3018	7/15/14	2/26/17	Contig	Cornell University	SAMN02741590	GCA_000728305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/305/GCA_000728305.1_ASM72830v1	-	FSL R8-7153
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.71068	30.3	-	CUPY01	13	1809	1680	3/31/15	3/18/17	Contig	SC	SAMEA1010358	GCA_001229985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/985/GCA_001229985.1_7092_1_34	-	OXC6481
Salmonella enterica subsp. enterica serovar Enteritidis str. SA19942384	1412493	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007278.2/CP007278.2	-	1	4710	4448	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384214	GCA_000623575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/575/GCA_000623575.2_ASM62357v2	24786953	SA19942384
Staphylococcus aureus M1083	1169264	PRJNA158777	158777	Terrabacteria group	Firmicutes	2.86619	33	-	AOAW01	10	2964	2799	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00839749	GCA_000362705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/705/GCA_000362705.1_Stap_aure_M1083_V1	-	M1083
Staphylococcus aureus M1092	1158466	PRJNA88735	88735	Terrabacteria group	Firmicutes	2.89171	32.9	-	AIYL01	9	3011	2837	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809093	GCA_000362725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/725/GCA_000362725.1_Stap_aure_M1092_V1	-	M1092
Salmonella enterica subsp. enterica serovar Enteritidis str. SA19943269	1412494	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007279.2/CP007279.2	-	1	4713	4446	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384215	GCA_000623595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/595/GCA_000623595.2_ASM62359v2	24786953	SA19943269
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64972	30.4	-	CUUS01	15	1739	1624	3/31/15	3/18/17	Contig	SC	SAMEA1401515	GCA_001230045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/045/GCA_001230045.1_7213_3_64	-	OXC6608
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09595	37.9	-	JPBB01	25	3148	3045	7/15/14	2/26/17	Contig	Cornell University	SAMN02741588	GCA_000728325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/325/GCA_000728325.1_ASM72832v1	-	FSL R8-7133
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.56485	34.9	-	MQTJ01	89	5841	5540	3/6/17	3/8/17	Scaffold	"OARSA, CFSAN"	SAMN05608081	GCA_002021515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/515/GCA_002021515.1_ASM202151v1	-	MOD1_Bc86
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.55171	32	-	JUTX01	149	2505	2406	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197973	GCA_001075015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/015/GCA_001075015.1_ASM107501v1	26230489	764_SEPI
Mycobacterium tuberculosis TKK_03_0109	1448443	PRJNA235448	235448	Terrabacteria group	Actinobacteria	4.40495	65.6	-	JJYT01	4	4286	4088	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585938	GCA_000652075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/075/GCA_000652075.1_Myco_tube_TKK_03_0109_V1	-	TKK_03_0109
Candidatus Portiera aleyrodidarum BT-QVLC	1239881	PRJNA174845	174845	Proteobacteria	Gammaproteobacteria	0.357472	26.1	chromosome:NC_018618.1/CP003835.1	-	1	303	264	9/19/12	3/30/17	Complete Genome	"Instituto Cavanilles de Biodiversitat i Biologia Evolutiva (University of Valencia, Spain)"	SAMN02603414	GCA_000298385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/385/GCA_000298385.1_ASM29838v1	23144402	BT-QVLC
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10931	39.7	-	CKSB01	77	2357	2124	3/21/15	3/11/17	Contig	SC	SAMEA1023842	GCA_001087945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/945/GCA_001087945.1_6680_8_2	-	SMRU194
Helicobacter pylori SA35A	1345516	PRJEB4046	215914	Proteobacteria	delta/epsilon subdivisions	1.65946	38.9	-	CBNE01	64	1638	1460	9/21/13	3/24/17	Contig	MHH	SAMEA2272726	GCA_000475495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/495/GCA_000475495.1_SA35A	23898187	SA35A
Neisseria meningitidis	487	PRJNA384053	384053	Proteobacteria	Betaproteobacteria	2.10505	52	-	NGAQ01	89	-	-	9/20/17	9/22/17	Contig	Harvard T.H. Chan School of Public Health	SAMN06827267	GCA_002318135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/135/GCA_002318135.1_ASM231813v1	28904187	NmSL15x1
Streptococcus pyogenes UTSW-2	1115810	PRJNA78603	78603	Terrabacteria group	Firmicutes	1.86926	38.2	-	AVCG01	77	1961	1925	8/22/13	11/19/13	Contig	J. Craig Venter Institute	SAMN00828755	GCA_000454085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/085/GCA_000454085.1_SpyogUTSW-2v1.0	-	UTSW-2
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.45486	66.3	-	JTSC01	79	6149	5961	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105611	GCA_000793845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/845/GCA_000793845.1_AZPAE14913	25367914	AZPAE14913
Acinetobacter baumannii TG20546	1315151	PRJNA196270	196270	Proteobacteria	Gammaproteobacteria	3.89695	38.9	-	ASFI01	129	3802	3631	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055512	GCA_000453905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/905/GCA_000453905.1_ASM45390v1	-	TG20546
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.04554	35.2	-	LCXX01	18	2107	1981	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435089	GCA_001015875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/875/GCA_001015875.1_ASM101587v1	25946017	312754
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.0372	41.2	-	CZDV01	36	2042	1935	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595199	GCA_900010445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/445/GCA_900010445.1_assembly_2061410	-	-
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.36463	38.3	-	FJEM01	32	3088	2955	2/20/16	3/27/17	Contig	SC	SAMEA2064386	GCA_900061675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/675/GCA_900061675.1_10771_3_82	-	2531STDY5467459
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.6135	50.8	-	CXHZ01	361	5145	4424	7/16/15	2/24/17	Scaffold	SC	SAMEA1965448	GCA_001251075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/075/GCA_001251075.1_8289_7_58	-	82205
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.24573	67.9	-	LWYK01	150	7529	6914	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208652	GCA_001978165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/165/GCA_001978165.1_ASM197816v1	-	MSHR0487
Vibrio cholerae O1 biovar El Tor	686	PRJNA308888	308888	Proteobacteria	Gammaproteobacteria	4.12438	47.5	-	LRAF01	106	3940	3686	1/19/16	3/27/17	Contig	"Russian Research Anti-Plague Institute ""Microbe"""	SAMN04417215	GCA_001517845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/845/GCA_001517845.1_ASM151784v1	-	M1275
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.04721	28.3	-	MOQS01	75	3707	3585	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710889	GCA_002301925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/925/GCA_002301925.1_ASM230192v1	-	6600-G/ST8
Vibrio parahaemolyticus	670	PRJNA272927	272927	Proteobacteria	Gammaproteobacteria	5.10671	45.3	-	JXUY01	53	4934	4702	2/20/15	3/25/17	Contig	Health Canada	SAMN03287766	GCA_000878575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/575/GCA_000878575.1_ASM87857v1	25838480	Oct-03
Klebsiella pneumoniae	573	PRJNA244567	244567	Proteobacteria	Gammaproteobacteria	5.54578	57	-	JOOW01	5	5545	5187	8/19/14	2/21/17	Scaffold	Los Alamos National Laboratory	SAMN02870152	GCA_000742135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/135/GCA_000742135.1_ASM74213v1	25291763	ATCC 13883
Enterococcus faecalis MA1	1263864	PRJNA182207	182207	Terrabacteria group	Firmicutes	2.96214	37.4	-	ANMP01	74	3059	2915	1/29/14	3/24/17	Contig	The Affiliated Shenzhen Nanshan Hospital of Guangdong Medical College	SAMN02641563	GCA_000524625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/625/GCA_000524625.1_MMA1	-	MA1
Neisseria gonorrhoeae ALB_2011_01-02	1352347	PRJNA209788	209788	Proteobacteria	Betaproteobacteria	2.14794	52.4	-	ATQE01	287	2503	2182	6/10/15	4/11/17	Scaffold	"Read Laboratory, Emory University"	SAMN02338842	GCA_001025905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/905/GCA_001025905.1_ASM102590v1	-	ALB_2011_01-02
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.14272	38.1	-	LNLM01	290	3369	3026	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270932	GCA_001545555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/555/GCA_001545555.1_ASM154555v1	-	VRE-1400294
Bordetella pertussis STO1-CHOM-0012	1331274	PRJNA202177	202177	Proteobacteria	Betaproteobacteria	4.06544	67.7	-	AXRU02	37	3953	3454	10/24/13	3/24/17	Contig	JCVI	SAMN02436296	GCA_000479855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/855/GCA_000479855.2_gbp11v01	24356839	STO1-CHOM-0012
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65585	31.4	-	FBPF01	20	1702	1612	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683461	GCA_001490695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/695/GCA_001490695.1_H112820480	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.96359	55.3	-	FKAN01	66	4929	4675	4/6/16	3/28/17	Scaffold	SC	SAMEA2273411	GCA_900076155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/155/GCA_900076155.1_11983_6_87	-	e1764
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.91522	64.3	-	FSGC01	14	4850	4720	12/14/16	3/21/17	Contig	SC	SAMEA2070157	GCA_900135155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/155/GCA_900135155.1_10625_4_20	-	20
Enterobacter hormaechei	158836	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.54334	55.5	-	DBFW01	51	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06455326	GCA_002295245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/245/GCA_002295245.1_ASM229524v1	28894102	-
Pseudomonas sp. B26(2017)	1981732	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.23065	60.4	-	NEJJ01	37	5713	5542	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771342	GCA_002113045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/045/GCA_002113045.1_ASM211304v1	-	B26(2017)
Streptomyces sp. MBT28	1488357	PRJNA279348	279348	Terrabacteria group	Actinobacteria	8.00353	72.4	-	LARV01	548	7377	6684	4/15/15	3/11/17	Scaffold	Leiden University	SAMN03444561	GCA_000972435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/435/GCA_000972435.1_StrepMBT28_1.0	-	MBT28
Streptomyces sp. NBRC 109706	1550035	PRJDB3174	275082	Terrabacteria group	Actinobacteria	7.737	71.7	-	BBOM01	26	6421	6087	2/7/15	3/11/17	Scaffold	National Institute of Technology and Evaluation	SAMD00020841	GCA_000974485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/485/GCA_000974485.1_ASM97448v1	25603349	NBRC 109706
Pseudomonas sp. B24(2017)	1981734	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	5.93462	63.4	-	NEJL01	64	5493	5287	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771340	GCA_002113085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/085/GCA_002113085.1_ASM211308v1	-	B24(2017)
Enterobacter hormaechei	158836	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.62594	55.5	-	DBSC01	32	-	-	9/15/17	9/18/17	Scaffold	University of Queensland	SAMN06452913	GCA_002306215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/306/215/GCA_002306215.1_ASM230621v1	28894102	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.03785	64.1	-	FVLC01	15	5082	4960	3/10/17	3/18/17	Contig	SC	SAMEA2070159	GCA_900135175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/175/GCA_900135175.1_10625_4_26	-	26
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.03778	54.8	-	FKAP01	53	4955	4717	4/6/16	3/28/17	Scaffold	SC	SAMEA2273409	GCA_900076165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/165/GCA_900076165.1_11983_6_86	-	e1728
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.6907	31.3	-	FBLC01	33	1743	1629	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683354	GCA_001490715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/715/GCA_001490715.1_p494A	-	n/a
Bordetella pertussis STO1-CNMC-0004	1331275	PRJNA202178	202178	Proteobacteria	Betaproteobacteria	3.85504	67.9	-	AXSV02	149	3707	3353	10/24/13	3/24/17	Contig	JCVI	SAMN02436303	GCA_000479875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/875/GCA_000479875.2_gbp12v01	24356839	STO1-CNMC-0004
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.26767	37.9	-	LNLK01	314	3475	3093	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270930	GCA_001545595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/595/GCA_001545595.1_ASM154559v1	-	VRE-1300937
Neisseria gonorrhoeae ALB_2011_04_03	1351779	PRJNA209477	209477	Proteobacteria	Betaproteobacteria	2.09974	52.4	-	ATQC01	341	2366	2120	6/10/15	3/26/17	Scaffold	"Read Laboratory, Emory University"	SAMN02338805	GCA_001025915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/915/GCA_001025915.1_ASM102591v1	-	ALB_2011_04_03
Enterococcus faecalis AZ19	1343497	PRJNA207078	207078	Terrabacteria group	Firmicutes	2.93529	37.3	-	AYLU01	98	3002	2872	4/24/14	3/24/17	Contig	Georgia Institute of Technology	SAMN02729319	GCA_000647995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/995/GCA_000647995.1_Ef.AZ19.1	24571132	AZ19
Klebsiella pneumoniae	573	PRJNA248444	248444	Proteobacteria	Gammaproteobacteria	5.4668	57.3	-	JNFR01	44	5398	5144	9/17/14	2/21/17	Scaffold	Northwestern University Feinberg School of Medicine	SAMN02798558	GCA_000755605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/605/GCA_000755605.1_ASM75560v1	-	KPPR1
Vibrio parahaemolyticus	670	PRJNA272927	272927	Proteobacteria	Gammaproteobacteria	5.09138	45.3	-	JXUX01	58	4922	4688	2/20/15	3/25/17	Contig	Health Canada	SAMN03287767	GCA_000878585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/585/GCA_000878585.1_ASM87858v1	25838480	Oct-97
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.1605	28.6	-	MPEP01	168	3773	3651	9/14/17	9/18/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710918	GCA_002301945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/945/GCA_002301945.1_ASM230194v1	-	6635-BI/ST1
Vibrio cholerae O1 biovar El Tor	686	PRJNA308901	308901	Proteobacteria	Gammaproteobacteria	4.11108	47.5	-	LRAG01	93	3930	3698	1/19/16	3/27/17	Contig	"Russian Research Anti-Plague Institute ""Microbe"""	SAMN04417250	GCA_001517855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/855/GCA_001517855.1_ASM151785v1	-	M1275D
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.05752	68.2	-	LWYH01	346	7378	6678	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208649	GCA_001978175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/175/GCA_001978175.1_ASM197817v1	-	Ubon-P45-Bp25
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.6372	50.8	-	CXOH01	383	5222	4438	7/20/15	2/24/17	Scaffold	SC	SAMEA2003373	GCA_001251115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/115/GCA_001251115.1_8289_7_39	-	75659
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.3634	38.3	-	FJEO01	30	3083	2957	2/20/16	3/27/17	Contig	SC	SAMEA2065728	GCA_900061685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/685/GCA_900061685.1_10771_3_84	-	2531STDY5467461
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.09117	41.2	-	CZDN01	63	2095	1947	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595185	GCA_900010555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/555/GCA_900010555.1_assembly_940255	-	-
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.04271	35.2	-	LCXY01	18	2102	1980	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435090	GCA_001015895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/895/GCA_001015895.1_ASM101589v1	25946017	325662
Acinetobacter baumannii TG22110	1315154	PRJNA196273	196273	Proteobacteria	Gammaproteobacteria	3.98073	39	-	ASFJ01	62	3807	3588	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055515	GCA_000453925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/925/GCA_000453925.1_ASM45392v1	-	TG22110
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.30262	66.5	-	JTRL01	136	6007	5795	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105628	GCA_000793865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/865/GCA_000793865.1_AZPAE14930	25367914	AZPAE14930
Streptococcus pyogenes GA19681	1115815	PRJNA78613	78613	Terrabacteria group	Firmicutes	1.83331	38.4	-	AVCE01	119	2046	2018	8/22/13	11/19/13	Contig	J. Craig Venter Institute	SAMN00828761	GCA_000454125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/125/GCA_000454125.1_SpyogGA19681v1.0	-	GA19681
Neisseria meningitidis	487	PRJNA384053	384053	Proteobacteria	Betaproteobacteria	2.23151	51.6	-	NGAR01	137	-	-	9/20/17	9/22/17	Contig	Harvard T.H. Chan School of Public Health	SAMN06827266	GCA_002318145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/145/GCA_002318145.1_ASM231814v1	28904187	NmSL14x1
Helicobacter pylori SA302C	1345550	PRJEB4134	216017	Proteobacteria	delta/epsilon subdivisions	1.57193	39	-	CBNA01	49	1545	1396	9/21/13	3/24/17	Contig	MHH	SAMEA2272560	GCA_000475515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/515/GCA_000475515.1_SA302C	23898187	SA302C
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.17478	39.5	-	CLZS01	66	2428	2204	3/21/15	3/11/17	Contig	SC	SAMEA1028744	GCA_001088045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/045/GCA_001088045.1_6983_8_96	-	SMRU2400
Blattabacterium sp. (Nauphoeta cinerea)	1316444	PRJNA196320	196320	FCB group	Bacteroidetes/Chlorobi group	0.626626	26.0678	chromosome:NC_022550.1/CP005488.1; plasmid unnamed:NC_022551.1/CP005489.1	-	2	626	539	9/27/13	4/8/17	Complete Genome	UT Tyler Biology Dept.	SAMN02604283	GCA_000471965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/965/GCA_000471965.1_ASM47196v1	24071059	-
Mycobacterium tuberculosis TKK_03_0111	1448445	PRJNA235450	235450	Terrabacteria group	Actinobacteria	4.40874	65.5	-	JJYS01	3	4289	4095	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585940	GCA_000652095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/095/GCA_000652095.1_Myco_tube_TKK_03_0111_V1	-	TKK_03_0111
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.5172	31.9	-	JUTA01	105	2442	2318	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197996	GCA_001075025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/025/GCA_001075025.1_ASM107502v1	26230489	785_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.38546	35	-	MQTL01	101	5772	5448	3/6/17	3/8/17	Scaffold	"OARSA, CFSAN"	SAMN05415289	GCA_002021535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/535/GCA_002021535.1_ASM202153v1	-	MOD1_Bc93
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	2.88856	37.9	-	JPBC01	19	2902	2814	7/15/14	2/26/17	Contig	Cornell University	SAMN02741589	GCA_000728345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/345/GCA_000728345.1_ASM72834v1	-	FSL R8-7149
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69661	30.4	-	CUOI01	18	1812	1717	3/31/15	3/18/17	Contig	SC	SAMEA1010273	GCA_001230125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/125/GCA_001230125.1_7065_7_81	-	OXC6429
Salmonella enterica subsp. enterica serovar Enteritidis str. SA19961622	1412497	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007281.2/CP007281.2	-	1	4708	4446	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384218	GCA_000623635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/635/GCA_000623635.2_ASM62363v2	24786953	SA19961622
Staphylococcus aureus M1093	1158467	PRJNA88737	88737	Terrabacteria group	Firmicutes	2.79053	32.9	-	AIYM01	5	2901	2746	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809094	GCA_000362745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/745/GCA_000362745.1_Stap_aure_M1093_V1	-	M1093
Staphylococcus aureus M1095	1158468	PRJNA88739	88739	Terrabacteria group	Firmicutes	2.98126	32.9	-	AIYN01	12	3160	2975	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809095	GCA_000362765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/765/GCA_000362765.1_Stap_aure_M1095_V1	-	M1095
Salmonella enterica subsp. enterica serovar Enteritidis str. SA19971331	1412496	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007284.2/CP007284.2	-	1	4709	4448	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384217	GCA_000623695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/695/GCA_000623695.2_ASM62369v2	24786953	SA19971331
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.81223	30.2	-	CUVH01	37	1923	1779	3/31/15	3/18/17	Contig	SC	SAMEA1400850	GCA_001230165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/165/GCA_001230165.1_7213_3_76	-	OXC6621
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.10315	37.8	-	JPAF01	24	3179	3077	7/15/14	2/26/17	Contig	Cornell University	SAMN02741566	GCA_000728365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/365/GCA_000728365.1_ASM72836v1	-	FSL R8-6828
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	6.44388	34.7	-	MQTK01	243	6932	6501	3/6/17	3/8/17	Scaffold	"OARSA, CFSAN"	SAMN05415699	GCA_002021545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/545/GCA_002021545.1_ASM202154v1	-	MOD1_Bc30
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.59081	31.9	-	JUSF01	132	2542	2439	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198017	GCA_001075055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/055/GCA_001075055.1_ASM107505v1	26230489	803_SEPI
Mycobacterium tuberculosis TKK_03_0112	1448446	PRJNA235451	235451	Terrabacteria group	Actinobacteria	4.40592	65.5	-	JJYR01	5	4299	4095	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585941	GCA_000652115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/115/GCA_000652115.1_Myco_tube_TKK_03_0112_V1	-	TKK_03_0112
Mycoplasma hyorhinis	2100	PRJNA335953	335953	Terrabacteria group	Tenericutes	0.837377	25.9	chromosome:NZ_CP016817.1/CP016817.1	-	1	755	661	8/16/16	4/5/17	Complete Genome	LNCC	SAMN05467877	GCA_001705605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/605/GCA_001705605.1_ASM170560v1	-	MDBK-IPV
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12067	39.7	-	CKWA01	74	2355	2143	3/21/15	3/4/17	Contig	SC	SAMEA1025826	GCA_001088125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/125/GCA_001088125.1_6823_5_10	-	SMRU1954
Helicobacter pylori SA220A	1345599	PRJEB4110	216066	Proteobacteria	delta/epsilon subdivisions	1.6646	39	-	CBND01	78	1617	1458	9/21/13	3/24/17	Contig	MHH	SAMEA2272240	GCA_000475535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/535/GCA_000475535.1_SA220A	23898187	SA220A
Neisseria meningitidis	487	PRJNA384053	384053	Proteobacteria	Betaproteobacteria	2.19342	51.5	-	NGAS01	132	-	-	9/20/17	9/22/17	Contig	Harvard T.H. Chan School of Public Health	SAMN06827265	GCA_002318155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/155/GCA_002318155.1_ASM231815v1	28904187	NmSL13x3
Streptococcus pyogenes GA06023	1115816	PRJNA78615	78615	Terrabacteria group	Firmicutes	1.97142	38.9	-	AWPJ01	420	2298	2280	9/19/13	9/19/13	Contig	J. Craig Venter Institute	SAMN00828760	GCA_000468795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/795/GCA_000468795.1_SpyogGA06023v1.0	-	GA06023
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.85868	66	-	JTSB01	105	6640	6424	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105612	GCA_000793885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/885/GCA_000793885.1_AZPAE14914	25367914	AZPAE14914
Acinetobacter baumannii TG22112	1315155	PRJNA196274	196274	Proteobacteria	Gammaproteobacteria	4.38026	38.9	-	ASFK01	64	4241	4052	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055516	GCA_000453945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/945/GCA_000453945.1_ASM45394v1	-	TG22112
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.19852	35.4	-	LDAH01	43	2314	2126	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435113	GCA_001015915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/915/GCA_001015915.1_ASM101591v1	25946017	SH0986
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.14326	41.1	-	CZEB01	104	2199	2039	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595206	GCA_900010565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/565/GCA_900010565.1_assembly_12V457	-	-
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.36223	38.3	-	FJEP01	29	3085	2954	2/20/16	3/27/17	Contig	SC	SAMEA2065274	GCA_900061695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/695/GCA_900061695.1_10771_3_85	-	2531STDY5467462
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.45828	50.8	-	CWTU01	362	4987	4198	7/16/15	2/24/17	Scaffold	SC	SAMEA3345107	GCA_001251135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/135/GCA_001251135.1_H14136026101	-	26101B_1
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.03748	68.3	-	LWYM01	229	7305	6686	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208654	GCA_001978185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/185/GCA_001978185.1_ASM197818v1	-	MSHR0465A
Vibrio cholerae	666	PRJNA308893	308893	Proteobacteria	Gammaproteobacteria	4.0411	47.6	-	LRBH01	254	3833	3492	1/21/16	3/27/17	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN04417245	GCA_001521835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/835/GCA_001521835.1_ASM152183v1	-	M888
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.20509	28.4	-	MPER01	121	3954	3777	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710920	GCA_002301975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/975/GCA_002301975.1_ASM230197v1	-	6637-AL/ST58
Vibrio parahaemolyticus	670	PRJNA272927	272927	Proteobacteria	Gammaproteobacteria	5.20214	45.2	-	JXVA01	59	5065	4833	2/20/15	3/25/17	Contig	Health Canada	SAMN03287764	GCA_000878595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/595/GCA_000878595.1_ASM87859v1	25838480	Oct-93
Klebsiella pneumoniae	573	PRJNA259998	259998	Proteobacteria	Gammaproteobacteria	5.71613	57	-	JRGE01	72	5813	5522	11/20/14	2/21/17	Scaffold	China CDC	SAMN03014686	GCA_000785625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/625/GCA_000785625.1_ASM78562v1	25573939	XDR
Enterococcus faecalis FL2	1400799	PRJNA219184	219184	Terrabacteria group	Firmicutes	2.66569	37.6	-	AYKK01	119	2692	2580	4/24/14	3/24/17	Contig	Georgia Institute of Technology	SAMN02729321	GCA_000648015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/015/GCA_000648015.1_Ef.FL2.1	24571132	FL2
Neisseria gonorrhoeae ATL_2011_01-25	1351785	PRJNA209498	209498	Proteobacteria	Betaproteobacteria	2.12215	52.4	-	ATQJ01	277	2440	2142	6/10/15	4/11/17	Scaffold	"Read Laboratory, Emory University"	SAMN02338811	GCA_001025985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/985/GCA_001025985.1_ASM102598v1	-	ATL_2011_01-25
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.1341	37.8	-	LNLP01	196	3299	3008	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270935	GCA_001545605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/605/GCA_001545605.1_ASM154560v1	-	VRE-1400408
Bordetella pertussis STO1-CHOC-0016	1331276	PRJNA202179	202179	Proteobacteria	Betaproteobacteria	4.03385	67.8	-	AXSA02	54	3947	3550	10/24/13	3/24/17	Contig	JCVI	SAMN02436197	GCA_000479895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/895/GCA_000479895.2_gbp13v01	24356839	STO1-CHOC-0016
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68523	31.4	-	FBOK01	32	1735	1633	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683412	GCA_001490735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/735/GCA_001490735.1_H090780151	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.91457	55.1	-	FKAS01	41	4891	4627	4/6/16	3/28/17	Scaffold	SC	SAMEA2273414	GCA_900076175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/175/GCA_900076175.1_11983_6_90	-	e1775
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23035	64.2	-	FSGD01	36	5238	5096	12/14/16	3/21/17	Contig	SC	SAMEA2070593	GCA_900135185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/185/GCA_900135185.1_10625_4_21	-	21
Enterobacter hormaechei	158836	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.44909	55.4	-	DCLN01	54	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451422	GCA_002321065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/065/GCA_002321065.1_ASM232106v1	28894102	-
Pseudomonas sp. B22(2017)	1981736	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	5.61398	62.8	-	NEJN01	43	5174	4998	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771338	GCA_002113105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/105/GCA_002113105.1_ASM211310v1	-	B22(2017)
Streptomyces sp. SBT349	1580539	PRJNA280805	280805	Terrabacteria group	Actinobacteria	8.06439	72.7	-	LAVK01	691	7212	6576	7/17/15	3/11/17	Scaffold	University of Wuerzburg	SAMN03468208	GCA_001083795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/795/GCA_001083795.1_Nocardiopsis_sp_SBT349_SPAdes_SSPACE	-	SBT349
Streptomyces sp. NBRC 110468	1679753	PRJDB4042	289865	Terrabacteria group	Actinobacteria	8.72308	71.7	-	BBYG01	33	7738	7402	7/16/15	3/11/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00035239	GCA_001184025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/025/GCA_001184025.1_ASM118402v1	-	NBRC 110468
Pseudomonas sp. B20(2017)	1981738	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.13696	60.5	-	NEJP01	33	5632	5479	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771336	GCA_002113125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/125/GCA_002113125.1_ASM211312v1	-	B20(2017)
Enterobacter hormaechei	158836	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.49185	55.5	-	DCLP01	37	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454769	GCA_002321105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/105/GCA_002321105.1_ASM232110v1	28894102	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.06791	64.2	-	FVKS01	21	5059	4918	3/10/17	3/18/17	Contig	SC	SAMEA2071182	GCA_900135195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/195/GCA_900135195.1_10625_4_25	-	25
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.07441	55	-	FKAR01	77	4995	4744	4/6/16	3/28/17	Scaffold	SC	SAMEA2273413	GCA_900076185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/185/GCA_900076185.1_11983_6_89	-	e1774
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.63513	31.4	-	FBOG01	37	1679	1584	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683420	GCA_001490755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/755/GCA_001490755.1_H102740168	-	n/a
Bordetella pertussis CHLA-20	1331283	PRJNA202186	202186	Proteobacteria	Betaproteobacteria	3.8285	67.9	-	AXSC02	131	3672	3285	10/24/13	3/24/17	Contig	JCVI	SAMN02436244	GCA_000479915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/915/GCA_000479915.2_gbp20v01	24356839	CHLA-20
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.14096	38.2	-	LNLN01	335	3414	3032	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270933	GCA_001545615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/615/GCA_001545615.1_ASM154561v1	-	VRE-1400325
Neisseria gonorrhoeae MIA_2011_03-10	1351790	PRJNA209507	209507	Proteobacteria	Betaproteobacteria	2.16723	52.4	-	ATQO01	288	2524	2211	6/10/15	4/11/17	Scaffold	"Read Laboratory, Emory University"	SAMN02338816	GCA_001025995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/995/GCA_001025995.1_ASM102599v1	-	MIA_2011_03-10
Enterococcus faecalis GA2	1400800	PRJNA219185	219185	Terrabacteria group	Firmicutes	2.67756	37.6	-	AYKL01	50	2654	2583	4/24/14	3/24/17	Contig	Georgia Institute of Technology	SAMN02729327	GCA_000648035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/035/GCA_000648035.1_Ef.GA2.1	24571132	GA2
Klebsiella pneumoniae	573	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	5.57072	57.2	-	JSZK01	42	5680	5461	12/1/14	2/21/17	Scaffold	Miami University	SAMN03076171	GCA_000787995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/995/GCA_000787995.1_ASM78799v1	25593250	101488
Vibrio parahaemolyticus	670	PRJNA272927	272927	Proteobacteria	Gammaproteobacteria	5.10949	45.3	-	JXVB01	62	4952	4716	2/20/15	3/25/17	Contig	Health Canada	SAMN03287763	GCA_000878645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/645/GCA_000878645.1_ASM87864v1	25838480	Oct-88
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.13191	28.7	-	MOQY01	281	3856	3659	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710883	GCA_002301985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/985/GCA_002301985.1_ASM230198v1	-	6593-Y/ST110
Vibrio cholerae	666	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.07145	47.5	-	LRIK01	3	3930	3682	1/22/16	3/27/17	Contig	US Food and Drug Administration 	SAMN03996252	GCA_001525525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/525/GCA_001525525.1_ASM152552v1	-	ATCC 25874
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.38362	67.9	-	LWYN01	336	7691	6924	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208655	GCA_001978205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/205/GCA_001978205.1_ASM197820v1	-	MSHR0776
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.44647	50.8	-	CWSU01	374	4971	4185	7/16/15	2/24/17	Scaffold	SC	SAMEA3345045	GCA_001251175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/175/GCA_001251175.1_H14046047401	-	47401ss_1
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.36394	38.3	-	FJEY01	27	3086	2958	2/20/16	3/27/17	Contig	SC	SAMEA2065108	GCA_900061705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/705/GCA_900061705.1_10396_8_35	-	2531STDY5467457
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.048	41.2	-	CZDQ01	36	2062	1956	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595198	GCA_900010735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/735/GCA_900010735.1_assembly_2061238	-	-
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.01342	35.2	-	LCXZ01	19	2081	1957	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435091	GCA_001015925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/925/GCA_001015925.1_ASM101592v1	25946017	343959
Acinetobacter baumannii TG22142	1315156	PRJNA196275	196275	Proteobacteria	Gammaproteobacteria	4.23085	39.2	-	ASFL01	76	4100	3822	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055517	GCA_000453965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/965/GCA_000453965.1_ASM45396v1	-	TG22142
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.69001	66.2	-	JTSJ01	86	6405	6213	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105604	GCA_000793915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/915/GCA_000793915.1_AZPAE14906	25367914	AZPAE14906
Streptococcus pyogenes GA41046	1115812	PRJNA78607	78607	Terrabacteria group	Firmicutes	1.85944	38.4	-	AWWB01	32	1967	1932	9/19/13	9/19/13	Contig	J. Craig Venter Institute	SAMN00828758	GCA_000468875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/875/GCA_000468875.1_SpyogGA41046v1.0	-	GA41046
Neisseria meningitidis	487	PRJNA384053	384053	Proteobacteria	Betaproteobacteria	2.30398	51.5	-	NGAT01	154	-	-	9/20/17	9/22/17	Contig	Harvard T.H. Chan School of Public Health	SAMN06827264	GCA_002318165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/165/GCA_002318165.1_ASM231816v1	28904187	NmSL13x2
Helicobacter pylori SA161C	1345563	PRJEB4074	216032	Proteobacteria	delta/epsilon subdivisions	1.68914	39	-	CBNM01	62	1658	1479	9/21/13	3/24/17	Contig	MHH	SAMEA2272066	GCA_000475575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/575/GCA_000475575.1_SA161C	23898187	SA161C
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08338	39.6	-	CKZV01	53	2297	2065	3/21/15	3/4/17	Contig	SC	SAMEA1026171	GCA_001088165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/165/GCA_001088165.1_6840_3_15	-	SMRU1815
Mycoplasma hyorhinis DBS 1050	634997	PRJNA221198	221198	Terrabacteria group	Tenericutes	0.837447	25.9	chromosome:NC_022807.1/CP006849.1	-	1	753	655	11/14/13	4/2/17	Complete Genome	FDA	SAMN02603233	GCA_000496815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/815/GCA_000496815.1_ASM49681v1	24604646	DBS 1050
Mycobacterium tuberculosis TKK_03_0113	1448447	PRJNA235452	235452	Terrabacteria group	Actinobacteria	4.4211	65.1	-	JJYQ01	17	4326	4026	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585942	GCA_000652135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/135/GCA_000652135.1_Myco_tube_TKK_03_0113_V1	-	TKK_03_0113
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.56084	31.9	-	JUSL01	75	2566	2413	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198011	GCA_001075065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/065/GCA_001075065.1_ASM107506v1	26230489	799_SEPI
Bacillus cereus	1396	PRJNA380284	380284	Terrabacteria group	Firmicutes	5.26909	35.6	-	NBBB01	56	5624	5185	6/16/17	6/21/17	Scaffold	Nanjing Agricultural University	SAMN06640207	GCA_002196815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/815/GCA_002196815.1_ASM219681v1	-	CZ-2
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.12654	37.9	-	JPAI01	22	3189	3084	7/15/14	2/26/17	Contig	Cornell University	SAMN02741569	GCA_000728385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/385/GCA_000728385.1_ASM72838v1	-	FSL R8-6870
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69847	30.4	-	CUMU01	22	1814	1704	3/31/15	3/18/17	Contig	SC	SAMEA1010550	GCA_001230205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/205/GCA_001230205.1_7065_7_48	-	OXC6394
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20090135	1412460	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68654	52.2	chromosome:NZ_CP007320.2/CP007320.2	-	1	4707	4447	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384181	GCA_000623755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/755/GCA_000623755.2_ASM62375v2	24786953	EC20090135
Staphylococcus aureus M1103	1158469	PRJNA88741	88741	Terrabacteria group	Firmicutes	2.92694	33	-	AIYO01	8	3081	2902	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809096	GCA_000362785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/785/GCA_000362785.1_Stap_aure_M1103_V1	-	M1103
Staphylococcus aureus M1109	1169265	PRJNA158779	158779	Terrabacteria group	Firmicutes	2.99076	33.1	-	AOAX01	14	3138	2958	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00839750	GCA_000362805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/805/GCA_000362805.1_Stap_aure_M1109_V1	-	M1109
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20090193	1412459	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007321.2/CP007321.2	-	1	4708	4452	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384180	GCA_000623775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/775/GCA_000623775.2_ASM62377v2	24786953	EC20090193
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.87145	30.1	-	CULL01	26	2004	1843	3/31/15	3/18/17	Contig	SC	SAMEA1010401	GCA_001230245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/245/GCA_001230245.1_7065_7_13	-	OXC6359
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.01964	37.8	-	JPAJ01	34	3081	3005	7/15/14	2/26/17	Contig	Cornell University	SAMN02741570	GCA_000728405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/405/GCA_000728405.1_ASM72840v1	-	FSL R8-6892
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.72459	34.8	-	NHTY01	126	6056	5657	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163329	GCA_002199125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/125/GCA_002199125.1_ASM219912v1	-	MOD1_Bc57
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.54278	32	-	JURP01	130	2528	2416	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198033	GCA_001075105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/105/GCA_001075105.1_ASM107510v1	26230489	819_SEPI
Mycobacterium tuberculosis TKK_03_0114	1448448	PRJNA235453	235453	Terrabacteria group	Actinobacteria	4.41301	65.5	-	JJYP01	5	4294	4107	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585943	GCA_000652155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/155/GCA_000652155.1_Myco_tube_TKK_03_0114_V1	-	TKK_03_0114
Mycoplasma hyorhinis SK76	1118964	PRJNA78027	78027	Terrabacteria group	Tenericutes	0.836897	25.9	chromosome:NC_019552.1/CP003914.1	-	1	756	677	11/20/12	3/30/17	Complete Genome	MD Anderson Cancer Center	SAMN02603597	GCA_000313635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/635/GCA_000313635.1_ASM31363v1	23405353	SK76
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12517	39.6	-	CNPA02	199	2306	2103	3/23/15	3/5/17	Contig	SC	SAMEA1032678	GCA_001088185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/185/GCA_001088185.2_6930_8_12	-	R34-3018
Helicobacter pylori SA162C	1345565	PRJEB4076	216033	Proteobacteria	delta/epsilon subdivisions	1.64711	39.1	-	CBNQ01	103	1648	1427	9/21/13	3/24/17	Contig	MHH	SAMEA2271940	GCA_000475595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/595/GCA_000475595.1_SA162C	23898187	SA162C
Neisseria meningitidis	487	PRJNA384053	384053	Proteobacteria	Betaproteobacteria	2.14615	51.6	-	NGAU01	112	-	-	9/20/17	9/22/17	Contig	Harvard T.H. Chan School of Public Health	SAMN06827263	GCA_002318215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/215/GCA_002318215.1_ASM231821v1	28904187	NmSL13x1
Streptococcus pyogenes GA40468	1115817	PRJNA78617	78617	Terrabacteria group	Firmicutes	1.8805	38.4	-	AWTE01	212	2215	2187	10/25/13	12/5/13	Contig	J. Craig Venter Institute	SAMN02436563	GCA_000483505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/505/GCA_000483505.1_SpyogGA40468v1.0	-	GA40468
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.92973	66	-	JTRB01	153	6714	6445	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105638	GCA_000793945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/945/GCA_000793945.1_AZPAE14940	25367914	AZPAE14940
Acinetobacter baumannii TG22146	1315157	PRJNA196276	196276	Proteobacteria	Gammaproteobacteria	4.24117	39.1	-	ASFM01	93	4123	3830	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055518	GCA_000453985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/453/985/GCA_000453985.1_ASM45398v1	-	TG22146
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.01302	35.2	-	LDAF01	18	2080	1947	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435111	GCA_001015955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/955/GCA_001015955.1_ASM101595v1	25946017	SH0668
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.05743	41.1	-	CZFV01	112	2089	1918	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595239	GCA_900011045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/045/GCA_900011045.1_assembly_GD-0067	-	-
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.36443	38.3	-	FJEZ01	28	3085	2956	2/20/16	3/27/17	Contig	SC	SAMEA2065729	GCA_900061715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/715/GCA_900061715.1_10396_8_36	-	2531STDY5467464
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.91335	50.5	-	CWZF01	433	5520	4725	7/16/15	2/24/17	Scaffold	SC	SAMEA2445740	GCA_001251195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/195/GCA_001251195.1_12971_8_50	-	H140200293
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.13469	68.2	-	LWYP01	130	7401	6819	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208657	GCA_001978245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/245/GCA_001978245.1_ASM197824v1	-	NAU2B-1
Vibrio cholerae O1 biovar El Tor	686	PRJNA307556	307556	Proteobacteria	Gammaproteobacteria	4.02931	47.5	-	LQHM01	154	3788	3666	2/1/16	3/27/17	Contig	Massachusetts General Hospital	SAMN04382890	GCA_001543465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/465/GCA_001543465.1_PIC018.1.0	-	Inaba PIC018
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.05587	28.4	-	MPES01	97	3668	3548	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710921	GCA_002302005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/005/GCA_002302005.1_ASM230200v1	-	7450-DH/ST42
Vibrio parahaemolyticus	670	PRJNA272927	272927	Proteobacteria	Gammaproteobacteria	5.12415	45.3	-	JXVE01	85	4970	4726	2/20/15	3/25/17	Contig	Health Canada	SAMN03287760	GCA_000878665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/665/GCA_000878665.1_ASM87866v1	25838480	Oct-47
Klebsiella pneumoniae	573	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	5.57527	57.1	-	JSZJ01	56	5572	5289	12/1/14	2/21/17	Scaffold	Miami University	SAMN03076169	GCA_000788005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/005/GCA_000788005.1_ASM78800v1	25593250	101712
Enterococcus faecalis GAN13	1400801	PRJNA219186	219186	Terrabacteria group	Firmicutes	2.84692	37.4	-	AYLV01	92	2869	2757	4/24/14	3/24/17	Contig	Georgia Institute of Technology	SAMN02729326	GCA_000648055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/055/GCA_000648055.1_Ef.GAN13.1	24571132	GAN13
Neisseria gonorrhoeae MIA_2011_05-16	1351793	PRJNA209512	209512	Proteobacteria	Betaproteobacteria	2.13035	52.4	-	ATQR01	445	2538	2131	6/10/15	4/11/17	Scaffold	"Read Laboratory, Emory University"	SAMN02338818	GCA_001026025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/025/GCA_001026025.1_ASM102602v1	-	MIA_2011_05-16
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.11998	37.8	-	LNLX01	240	3327	3003	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270943	GCA_001545655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/655/GCA_001545655.1_ASM154565v1	-	VRE-1401988
Bordetella pertussis CHLA-26	1331284	PRJNA202187	202187	Proteobacteria	Betaproteobacteria	4.04541	67.8	-	AXSB02	41	3949	3543	10/24/13	3/24/17	Contig	JCVI	SAMN02436198	GCA_000479935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/935/GCA_000479935.2_gbp21v01	24356839	CHLA-26
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.67857	31.4	-	FBJI01	28	1727	1632	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683308	GCA_001490775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/775/GCA_001490775.1_CCN19	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.25263	54.9	-	FKAT01	59	5172	4935	4/6/16	3/28/17	Scaffold	SC	SAMEA2273415	GCA_900076195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/195/GCA_900076195.1_11983_6_91	-	e1784
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.45282	64.1	-	FSGG01	65	5589	5353	12/14/16	3/21/17	Contig	SC	SAMEA2071183	GCA_900135215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/215/GCA_900135215.1_10625_4_28	-	28
Enterobacter hormaechei	158836	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.53414	55.6	-	DCNI01	45	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06451973	GCA_002321975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/975/GCA_002321975.1_ASM232197v1	28894102	-
Pseudomonas sp. B19(2017)	1981740	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	5.56578	63	-	NEJR01	57	5185	4974	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771334	GCA_002113165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/165/GCA_002113165.1_ASM211316v1	-	B19(2017)
Streptomyces sp. TP-A0875	552354	PRJDB4101	293613	Terrabacteria group	Actinobacteria	6.77837	73.6	-	BBZE01	39	6095	5725	8/21/15	3/11/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00035869	GCA_001293595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/595/GCA_001293595.1_ASM129359v1	26450726	TP-A0875
Streptomyces sp. AVP053U2	1737066	PRJNA298352	298352	Terrabacteria group	Actinobacteria	7.75942	71.9	-	LMTQ02	183	6804	6090	12/18/15	3/13/17	Scaffold	University of Connecticut	SAMN04158509	GCA_001469455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/455/GCA_001469455.2_ASM146945v2	-	AVP053U2
Pseudomonas sp. B18(2017)	1981741	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	5.56057	63	-	NEJS01	58	5187	4976	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771333	GCA_002113185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/185/GCA_002113185.1_ASM211318v1	-	B18(2017)
Enterobacter hormaechei	158836	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.72112	55	-	DCOC01	49	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454224	GCA_002322225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/322/225/GCA_002322225.1_ASM232222v1	28894102	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.38004	64.1	-	FSGK01	34	5455	5288	12/14/16	4/2/17	Contig	SC	SAMEA2070163	GCA_900135245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/245/GCA_900135245.1_10625_4_38	-	38
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.2112	54.9	-	FKAU01	39	5133	4895	4/6/16	3/28/17	Scaffold	SC	SAMEA2273416	GCA_900076205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/205/GCA_900076205.1_11983_6_92	-	e1795
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.74549	31.3	-	FBEC01	41	1832	1734	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683162	GCA_001490795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/795/GCA_001490795.1_SS_2357	-	n/a
Bordetella pertussis CHLA-11	1420596	PRJNA227292	227292	Proteobacteria	Betaproteobacteria	4.0405	67.8	-	AYXH01	61	3967	3542	12/5/13	3/24/17	Contig	JCVI	SAMN02470082	GCA_000504325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/325/GCA_000504325.1_gbp23v01	-	CHLA-11
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.14187	37.8	-	LNMC01	226	3334	3025	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270948	GCA_001545675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/675/GCA_001545675.1_ASM154567v1	-	VRE-1402258
Neisseria gonorrhoeae MU_NG5	1351800	PRJNA209631	209631	Proteobacteria	Betaproteobacteria	2.13509	52.4	-	ATQY01	279	2463	2160	6/10/15	4/11/17	Scaffold	"Read Laboratory, Emory University"	SAMN02338826	GCA_001026065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/065/GCA_001026065.1_ASM102606v1	-	MU_NG5
Enterococcus faecalis KS19	1400802	PRJNA219188	219188	Terrabacteria group	Firmicutes	2.74034	37.5	-	AYND01	94	2721	2620	4/24/14	3/24/17	Contig	Georgia Institute of Technology	SAMN02729325	GCA_000648075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/075/GCA_000648075.1_Ef.KS19.1	24571132	KS19
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	5.72587	57.1	-	JSZI01	87	5894	5644	12/1/14	2/21/17	Scaffold	Miami University	SAMN03076179	GCA_000788015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/015/GCA_000788015.1_ASM78801v1	25593250	ATCC 13883
Vibrio parahaemolyticus	670	PRJNA272927	272927	Proteobacteria	Gammaproteobacteria	5.11292	45.3	-	JXVD01	117	4927	4693	2/20/15	3/25/17	Contig	Health Canada	SAMN03287761	GCA_000878675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/675/GCA_000878675.1_ASM87867v1	25838480	Oct-48
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.16236	28.6	-	MPET01	99	3852	3715	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710922	GCA_002302055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/055/GCA_002302055.1_ASM230205v1	-	7451-NonSp/ST2
Vibrio cholerae	666	PRJNA251402	251402	Proteobacteria	Gammaproteobacteria	4.04277	47.6	-	JNUX01	156	3835	3341	2/1/16	8/8/17	Contig	California Department of Public Health	SAMN02821160	GCA_001543505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/505/GCA_001543505.1_ASM154350v1	26988050	Drakes2013
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.15131	68.2	-	LWYR01	95	7416	6829	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208659	GCA_001978265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/265/GCA_001978265.1_ASM197826v1	-	NAU2B-6
Shigella sonnei	624	PRJEB2460	204320	Proteobacteria	Gammaproteobacteria	4.48409	50.8	-	CXFW01	374	4865	4289	7/17/15	2/24/17	Scaffold	SC	SAMEA1027733	GCA_001251215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/215/GCA_001251215.1_6350_1_6	-	sh03-3567
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.36532	38.3	-	FJFA01	25	3089	2958	2/20/16	3/27/17	Contig	SC	SAMEA2065276	GCA_900061725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/725/GCA_900061725.1_10396_8_37	-	2531STDY5467465
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	1.96976	41.3	-	CZDX01	41	1972	1862	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595186	GCA_900011205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/205/GCA_900011205.1_assembly_940430	-	-
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.0891	35.3	-	LCZN01	22	2142	2008	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435093	GCA_001015965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/965/GCA_001015965.1_ASM101596v1	25946017	383728
Acinetobacter baumannii TG22148	1315158	PRJNA196277	196277	Proteobacteria	Gammaproteobacteria	4.31569	38.9	-	ASFN01	54	4164	4011	8/21/13	3/15/17	Contig	Translational Genomics Research Institute	SAMN02055519	GCA_000454005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/005/GCA_000454005.1_ASM45400v1	-	TG22148
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.79462	66.2	-	JTNM01	92	6496	6288	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105731	GCA_000793955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/955/GCA_000793955.1_AZPAE15034	25367914	AZPAE15034
Streptococcus pyogenes GA19700	1115818	PRJNA78619	78619	Terrabacteria group	Firmicutes	1.94243	39.9	-	AWTF01	196	2124	2086	10/25/13	12/5/13	Contig	J. Craig Venter Institute	SAMN02436481	GCA_000483525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/525/GCA_000483525.1_SpyogGA19700v1.0	-	GA19700
Neisseria meningitidis	487	PRJNA384053	384053	Proteobacteria	Betaproteobacteria	2.12577	51.7	-	NGAV01	129	-	-	9/20/17	9/22/17	Contig	Harvard T.H. Chan School of Public Health	SAMN06827262	GCA_002318225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/225/GCA_002318225.1_ASM231822v1	28904187	NmJPb09x1
Helicobacter pylori SA157A	1345556	PRJEB4067	216085	Proteobacteria	delta/epsilon subdivisions	1.67041	38.9	-	CBNF01	72	1641	1430	9/21/13	3/24/17	Contig	MHH	SAMEA2272211	GCA_000475615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/615/GCA_000475615.1_SA157A	23898187	SA157A
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04677	39.6	-	CNUZ02	132	2232	2027	3/23/15	3/11/17	Contig	SC	SAMEA1032618	GCA_001088205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/205/GCA_001088205.2_6999_6_5	-	248734
Mycoplasma hyorhinis GDL-1	1129369	PRJNA80425	80425	Terrabacteria group	Tenericutes	0.83748	25.9	chromosome:NC_016829.1/CP003231.1	-	1	752	656	1/4/12	3/30/17	Complete Genome	University of Missouri	SAMN02604225	GCA_000241125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/125/GCA_000241125.1_ASM24112v1	22408248	GDL-1
Mycobacterium tuberculosis TKK_03_0115	1448449	PRJNA235454	235454	Terrabacteria group	Actinobacteria	4.41609	65.5	-	JJYO01	2	4271	4092	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585944	GCA_000652175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/175/GCA_000652175.1_Myco_tube_TKK_03_0115_V1	-	TKK_03_0115
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.63686	31.9	-	JURM01	96	2627	2494	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198036	GCA_001075135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/135/GCA_001075135.1_ASM107513v1	26230489	821_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.19694	35.3	-	NHUJ01	61	5622	5310	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163318	GCA_002199155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/155/GCA_002199155.1_ASM219915v1	-	MOD1_Bc179
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09431	37.9	-	JPAD01	22	3142	3041	7/15/14	2/26/17	Contig	Cornell University	SAMN02741564	GCA_000728415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/415/GCA_000728415.1_ASM72841v1	-	FSL R8-6791
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64484	30.4	-	CUSG01	20	1716	1609	3/31/15	3/18/17	Contig	SC	SAMEA1010397	GCA_001230285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/285/GCA_001230285.1_7092_1_87	-	OXC6534
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20090332	1412461	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007322.2/CP007322.2	-	1	4710	4454	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384182	GCA_000623795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/795/GCA_000623795.2_ASM62379v2	24786953	EC20090332
Staphylococcus aureus M1119	1158470	PRJNA88743	88743	Terrabacteria group	Firmicutes	2.94419	33.1	-	AIYP01	13	3063	2890	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809062	GCA_000362825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/825/GCA_000362825.1_Stap_aure_M1119_V1	-	M1119
Staphylococcus aureus M1126	1169266	PRJNA158781	158781	Terrabacteria group	Firmicutes	2.81832	32.8	-	AOAY01	16	2973	2806	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00839751	GCA_000362845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/845/GCA_000362845.1_Stap_aure_M1126_V1	-	M1126
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20090877	1412521	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007300.2/CP007300.2	-	1	4707	4445	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384242	GCA_000623815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/815/GCA_000623815.2_ASM62381v2	24786953	SA20090877
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.73429	30.2	-	CUSI01	25	1836	1706	3/31/15	3/18/17	Contig	SC	SAMEA1010474	GCA_001230365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/365/GCA_001230365.1_7092_1_9	-	OXC6456
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	2.88827	37.9	-	JOZY01	16	2917	2815	7/15/14	2/26/17	Contig	Cornell University	SAMN02741559	GCA_000728425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/425/GCA_000728425.1_ASM72842v1	-	FSL R8-6735
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.14626	35.4	-	NHUP01	44	5560	5231	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163290	GCA_002199165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/165/GCA_002199165.1_ASM219916v1	-	MOD1_Bc185
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.49507	32.1	-	JUMZ01	117	2427	2344	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198153	GCA_001075395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/395/GCA_001075395.1_ASM107539v1	26230489	934_SEPI
Mycobacterium tuberculosis TKK_03_0116	1448450	PRJNA235455	235455	Terrabacteria group	Actinobacteria	4.4994	65.3	-	JJYN01	10	4319	4125	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585945	GCA_000652195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/195/GCA_000652195.1_Myco_tube_TKK_03_0116_V1	-	TKK_03_0116
Mycoplasma hyorhinis MCLD	936139	PRJNA61173	61173	Terrabacteria group	Tenericutes	0.829709	25.9	chromosome:NC_017519.1/CP002669.1	-	1	745	637	4/27/11	3/30/17	Complete Genome	The Hebrew University Hadassah Medical School	SAMN02603925	GCA_000211295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/211/295/GCA_000211295.1_ASM21129v1	21705582	MCLD
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.14504	39.7	-	CMWZ01	106	2312	2001	3/23/15	3/9/17	Contig	SC	SAMEA1022770	GCA_001088245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/245/GCA_001088245.1_6406_5_6	-	409
Helicobacter pylori SA226A	1345519	PRJEB4118	215916	Proteobacteria	delta/epsilon subdivisions	1.70537	38.8	-	CBNH01	59	1679	1496	9/21/13	3/24/17	Contig	MHH	SAMEA2272031	GCA_000475655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/655/GCA_000475655.1_SA226A	23898187	SA226A
Neisseria meningitidis	487	PRJNA384053	384053	Proteobacteria	Betaproteobacteria	2.12953	51.7	-	NGAW01	128	-	-	9/20/17	9/22/17	Contig	Harvard T.H. Chan School of Public Health	SAMN06827261	GCA_002318235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/235/GCA_002318235.1_ASM231823v1	28904187	NmJPb05x6
Streptococcus pyogenes GA41039	1115819	PRJNA78621	78621	Terrabacteria group	Firmicutes	1.78267	38.4	-	AWTG01	50	1923	1886	10/25/13	12/5/13	Contig	J. Craig Venter Institute	SAMN02436478	GCA_000483545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/545/GCA_000483545.1_SpyogGA41039v1.0	-	GA41039
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.80851	65.9	-	JTSE01	99	6578	6335	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105609	GCA_000793985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/985/GCA_000793985.1_AZPAE14911	25367914	AZPAE14911
Acinetobacter baumannii EGD-HP18	1358412	PRJNA211933	211933	Proteobacteria	Gammaproteobacteria	4.13681	38.5	-	AVST01	147	3978	3776	9/11/13	3/18/17	Contig	National Environmental Engineering Research Institute-CSIR	SAMN02469690	GCA_000465635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/635/GCA_000465635.2_GS_De_Novo_Assembly	-	EGD-HP18
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.10535	35.3	-	LCZO01	22	2170	2038	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435094	GCA_001015995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/995/GCA_001015995.1_ASM101599v1	25946017	384541
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.32286	41.1	-	CZDP01	66	2375	2191	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595204	GCA_900011445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/445/GCA_900011445.1_assembly_9406160	-	-
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.41517	38.3	-	FJFR01	26	3122	3017	2/20/16	3/27/17	Contig	SC	SAMEA2077538	GCA_900061935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/935/GCA_900061935.1_10625_2_52	-	2532STDY5467525
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.55745	50.5	-	CXBN01	416	4898	4369	7/16/15	2/24/17	Scaffold	SC	SAMEA954790	GCA_001251235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/235/GCA_001251235.1_5236_2_12	-	ShIB2013_440764
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.15114	68.2	-	LWYQ01	86	7412	6827	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208658	GCA_001978285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/285/GCA_001978285.1_ASM197828v1	-	NAU2B-5
Vibrio cholerae	666	PRJNA306826	306826	Proteobacteria	Gammaproteobacteria	3.97053	47.5	-	LPXQ01	124	3804	3541	4/8/16	3/28/17	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN04364519	GCA_001617675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/675/GCA_001617675.1_ASM161767v1	-	M888D
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.75287	31.5	-	MPEU01	1925	3800	3633	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710923	GCA_002302065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/065/GCA_002302065.1_ASM230206v1	-	7452-Y/ST110
Vibrio parahaemolyticus	670	PRJNA272927	272927	Proteobacteria	Gammaproteobacteria	5.0983	45.3	-	JXVF01	76	4938	4692	2/20/15	3/25/17	Contig	Health Canada	SAMN03287759	GCA_000878705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/705/GCA_000878705.1_ASM87870v1	25838480	Oct-46
Klebsiella pneumoniae	573	PRJNA261775	261775	Proteobacteria	Gammaproteobacteria	5.75951	56.8978	plasmid pUMNturkey9_1:NZ_CM003132.1/CM003132.1	JRRF01	62	5820	5582	1/21/15	2/21/17	Scaffold	University of Minnesota	SAMN03075675	GCA_000826795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/795/GCA_000826795.1_ASM82679v1	-	UMNturkey9
Enterococcus faecalis MD6	1400803	PRJNA219189	219189	Terrabacteria group	Firmicutes	2.73319	37.5	-	AYLN01	102	2737	2623	4/24/14	3/24/17	Contig	Georgia Institute of Technology	SAMN02729323	GCA_000648095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/095/GCA_000648095.1_Ef.MD6.1	24571132	MD6
Neisseria gonorrhoeae MU_NG8	1351803	PRJNA209635	209635	Proteobacteria	Betaproteobacteria	2.0485	52.6	-	ATRA01	339	2326	2081	6/10/15	4/11/17	Scaffold	"Read Laboratory, Emory University"	SAMN02338828	GCA_001026085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/085/GCA_001026085.1_ASM102608v1	-	MU_NG8
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.14651	38	-	LNLY01	182	3347	3001	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270944	GCA_001545685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/685/GCA_001545685.1_ASM154568v1	-	VRE-1402006
Bordetella pertussis H934	1460381	PRJNA237535	237535	Proteobacteria	Betaproteobacteria	4.04897	67.7	-	JGWF01	279	4133	3342	5/1/14	4/10/17	Contig	JCVI	SAMN02614586	GCA_000662295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/295/GCA_000662295.1_gbb72v01	-	H934
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68732	31.3	-	FBGL01	27	1762	1664	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683234	GCA_001490815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/815/GCA_001490815.1_CCN288	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.25186	54.9	-	FKAV01	79	5179	4929	4/6/16	3/28/17	Scaffold	SC	SAMEA2273506	GCA_900076215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/215/GCA_900076215.1_12045_5_77	-	e1821
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.37995	64.1	-	FVKW01	35	5455	5286	3/10/17	3/18/17	Contig	SC	SAMEA2071187	GCA_900135255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/255/GCA_900135255.1_10625_4_40	-	40
Pseudomonas sp. B16(2017)	1981743	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.16551	60.7	-	NEKA01	37	5615	5469	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771331	GCA_002113205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/205/GCA_002113205.1_ASM211320v1	-	B16(2017)
Streptomyces sp. IMTB 1903	1776680	PRJNA308156	308156	Terrabacteria group	Actinobacteria	7.84623	72.6	-	LQYB01	65	7110	6799	1/22/16	3/12/17	Scaffold	Institute of Microbial Technology	SAMN04387707	GCA_001531145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/145/GCA_001531145.1_ASM153114v1	-	IMTB 1903
Streptomyces sp. NBRC 110611	1621259	PRJDB3538	312911	Terrabacteria group	Actinobacteria	7.90462	71	-	BBUY01	99	6859	6329	2/20/16	3/13/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00026621	GCA_001590865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/590/865/GCA_001590865.1_ASM159086v1	-	NBRC 110611
Pseudomonas sp. B15(2017)	1981744	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.40487	60.4	-	NEJZ01	41	5887	5723	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771330	GCA_002113215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/215/GCA_002113215.1_ASM211321v1	-	B15(2017)
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.3798	64.1	-	FSGL01	33	5453	5287	12/14/16	3/21/17	Contig	SC	SAMEA2070598	GCA_900135265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/265/GCA_900135265.1_10625_4_39	-	39
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.77125	55.4	-	FKAW01	36	4659	4453	4/5/16	3/28/17	Scaffold	SC	SAMEA2273418	GCA_900076225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/225/GCA_900076225.1_11983_6_94	-	e1831
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66054	31.4	-	FAXV01	24	1720	1629	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683018	GCA_001490835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/835/GCA_001490835.1_EC3474	-	n/a
Bordetella pertussis NBRC 107857	1216981	PRJDB243	171911	Proteobacteria	Betaproteobacteria	3.77928	68	-	BCZH01	366	3690	3267	3/11/16	3/28/17	Contig	National Institute of Technology and Evaluation	SAMD00046894	GCA_001598615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/615/GCA_001598615.1_ASM159861v1	-	NBRC 107857
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.04506	38	-	LNLL01	253	3245	2915	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270931	GCA_001545715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/715/GCA_001545715.1_ASM154571v1	-	VRE-1400136
Neisseria gonorrhoeae MU_NG12	1351805	PRJNA209638	209638	Proteobacteria	Betaproteobacteria	2.09426	52.4	-	ATRC01	353	2372	2117	6/10/15	4/11/17	Scaffold	"Read Laboratory, Emory University"	SAMN02338830	GCA_001026105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/105/GCA_001026105.1_ASM102610v1	-	MU_NG12
Enterococcus faecalis MN16	1400804	PRJNA219190	219190	Terrabacteria group	Firmicutes	2.83359	37.4	-	AYKM01	63	2812	2730	4/24/14	3/24/17	Contig	Georgia Institute of Technology	SAMN02729320	GCA_000648115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/115/GCA_000648115.1_Ef.MN16.1	24571132	MN16
Enterobacter hormaechei	158836	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.43812	55.6	-	DELG01	22	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06454560	GCA_002354265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/265/GCA_002354265.1_ASM235426v1	28894102	-
Klebsiella pneumoniae	573	PRJEB8010	275603	Proteobacteria	Gammaproteobacteria	5.43289	57.3	-	CDPE01	62	5434	5143	2/18/15	2/21/17	Scaffold	WTSI	SAMEA2064505	GCA_000943155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/155/GCA_000943155.1_NOVST	-	novel ST outbreak lineage 2
Vibrio parahaemolyticus	670	PRJNA272927	272927	Proteobacteria	Gammaproteobacteria	5.09682	45.3	-	JXVG01	72	4919	4687	2/20/15	3/25/17	Contig	Health Canada	SAMN03287758	GCA_000878725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/725/GCA_000878725.1_ASM87872v1	25838480	Oct-45
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.10733	28.5	-	MPEV01	78	3775	3643	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710924	GCA_002302075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/075/GCA_002302075.1_ASM230207v1	-	7453-Y/ST2
Vibrio cholerae	666	PRJNA308799	308799	Proteobacteria	Gammaproteobacteria	4.01103	47.4	-	LRAE01	156	3825	3590	5/5/16	3/28/17	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN04413754	GCA_001637575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/575/GCA_001637575.1_ASM163757v1	-	M1501
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.13442	68.2	-	LWYS01	130	7390	6821	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208660	GCA_001978295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/295/GCA_001978295.1_ASM197829v1	-	NAU2B-8
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.46105	50.8	-	CXCN01	362	4753	4305	7/16/15	2/24/17	Scaffold	SC	SAMEA954708	GCA_001251255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/255/GCA_001251255.1_5236_5_12	-	Sh54228_440888
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.41178	38.3	-	FJGS01	19	3115	3010	2/20/16	3/27/17	Contig	SC	SAMEA2080610	GCA_900061945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/945/GCA_900061945.1_10625_2_23	-	2532STDY5467496
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.33762	41	-	CZFT01	38	2400	2238	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595237	GCA_900011455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/455/GCA_900011455.1_assembly_GD-0063	-	-
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.00823	35.2	-	LCZP01	21	2076	1936	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435095	GCA_001016005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/005/GCA_001016005.1_ASM101600v1	25946017	404288
Acinetobacter baumannii 107m	1149135	PRJEB4505	222617	Proteobacteria	Gammaproteobacteria	3.88077	38.9	-	CBSG01	45	3718	3590	10/17/13	3/15/17	Contig	IBUN	SAMEA2272126	GCA_000493615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/615/GCA_000493615.1_ABIBUN_1	-	107m
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.24206	66.5	-	JTRZ01	93	5950	5752	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105614	GCA_000794005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/005/GCA_000794005.1_AZPAE14916	25367914	AZPAE14916
Streptococcus pyogenes GA40056	1115821	PRJNA78625	78625	Terrabacteria group	Firmicutes	1.82287	38.2	-	AWTI01	45	1930	1893	10/25/13	12/5/13	Contig	J. Craig Venter Institute	SAMN02436403	GCA_000483565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/565/GCA_000483565.1_SpyogGA40056v1.0	-	GA40056
Neisseria meningitidis	487	PRJNA384053	384053	Proteobacteria	Betaproteobacteria	2.11818	51.8	-	NGAX01	120	-	-	9/20/17	9/22/17	Contig	Harvard T.H. Chan School of Public Health	SAMN06827260	GCA_002318255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/255/GCA_002318255.1_ASM231825v1	28904187	NmJPb05x5
Helicobacter pylori SA34C	1345515	PRJEB4045	215913	Proteobacteria	delta/epsilon subdivisions	1.54819	38.9	-	CBNY01	131	1535	1339	9/21/13	3/24/17	Contig	MHH	SAMEA2272588	GCA_000475675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/675/GCA_000475675.1_SA34C	23898187	SA34C
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.05219	39.7	-	CMRG01	72	2269	2037	3/22/15	3/4/17	Contig	SC	SAMEA2062166	GCA_001088365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/365/GCA_001088365.1_9803_8_36	-	19F
Mycoplasma hyorhinis HUB-1	872331	PRJNA51405	51405	Terrabacteria group	Tenericutes	0.839615	25.9	chromosome:NC_014448.1/CP002170.1	-	1	766	656	8/20/10	3/30/17	Complete Genome	"Division of Animal Infectious Diseases, State Key Laboratory of Agricultural Microbiology Huazhong Agricultural University"	SAMN02603209	GCA_000145705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/145/705/GCA_000145705.1_ASM14570v1	20802032	HUB-1
Mycobacterium tuberculosis TKK_03_0118	1448452	PRJNA235457	235457	Terrabacteria group	Actinobacteria	4.40132	65.6	-	JJYM01	4	4285	4090	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585947	GCA_000652215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/215/GCA_000652215.1_Myco_tube_TKK_03_0118_V1	-	TKK_03_0118
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.49515	31.9	-	JUMT01	104	2437	2344	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198159	GCA_001075435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/435/GCA_001075435.1_ASM107543v1	26230489	94_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	4.9568	35.5	-	NHUR01	60	5405	5057	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163276	GCA_002199185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/185/GCA_002199185.1_ASM219918v1	-	MOD1_Bc187
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.11305	37.8	-	JPAK01	30	3218	3110	7/15/14	2/26/17	Contig	Cornell University	SAMN02741571	GCA_000728465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/465/GCA_000728465.1_ASM72846v1	-	FSL R8-6896
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.60874	30.4	-	CUJW01	14	1679	1582	3/31/15	3/18/17	Contig	SC	SAMEA1010680	GCA_001230405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/405/GCA_001230405.1_7038_3_63	-	OXC6313
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20091739	1412523	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007301.2/CP007301.2	-	1	4708	4449	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384244	GCA_000623835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/835/GCA_000623835.2_ASM62383v2	24786953	SA20091739
Staphylococcus aureus M1142	1169267	PRJNA158783	158783	Terrabacteria group	Firmicutes	2.8461	32.9	-	AOAZ01	3	2952	2788	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00839752	GCA_000362865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/865/GCA_000362865.1_Stap_aure_M1142_V1	-	M1142
Staphylococcus aureus M1167	1158471	PRJNA88745	88745	Terrabacteria group	Firmicutes	2.86133	32.8	-	AIYQ01	9	3008	2845	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809063	GCA_000362885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/885/GCA_000362885.1_Stap_aure_M1167_V1	-	M1167
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20093421	1412514	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007302.2/CP007302.2	-	1	4708	4447	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384235	GCA_000623855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/855/GCA_000623855.2_ASM62385v2	24786953	SA20093421
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.65885	30.4	-	CUSE01	14	1745	1632	3/31/15	3/18/17	Contig	SC	SAMEA1010418	GCA_001230525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/525/GCA_001230525.1_7092_1_86	-	OXC6533
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	2.9451	37.9	-	JPAT01	49	2992	2904	7/15/14	2/26/17	Contig	Cornell University	SAMN02741580	GCA_000728485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/485/GCA_000728485.1_ASM72848v1	-	FSL R8-7006
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.20063	35.3	-	NHUV01	48	5615	5317	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163272	GCA_002199225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/225/GCA_002199225.1_ASM219922v1	-	MOD1_Bc191
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.4367	32	-	JULN01	106	2383	2278	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198191	GCA_001075515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/515/GCA_001075515.1_ASM107551v1	26230489	971_SEPI
Mycobacterium tuberculosis TKK_03_0149	1448453	PRJNA235458	235458	Terrabacteria group	Actinobacteria	4.41343	65.5	-	JJYL01	4	4295	4096	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585948	GCA_000652235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/235/GCA_000652235.1_Myco_tube_TKK_03_0149_V1	-	TKK_03_0149
Buchnera aphidicola (Schlechtendalia chinensis)	118110	PRJNA281158	281158	Proteobacteria	Gammaproteobacteria	0.607835	25.8	chromosome:NZ_CP011299.1/CP011299.1	-	1	570	511	5/18/16	4/10/17	Complete Genome	"School of Life Sciences, Fudan University, Shanghai, China"	SAMN03483427	GCA_001648115.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/115/GCA_001648115.1_ASM164811v1	-	SC
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10526	39.7	-	CLWX01	64	2266	1975	3/21/15	3/15/17	Contig	SC	SAMEA1028981	GCA_001088425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/425/GCA_001088425.1_6983_5_18	-	SMRU2322
Helicobacter pylori SA173C	1345584	PRJEB4095	216052	Proteobacteria	delta/epsilon subdivisions	1.65704	38.8	-	CBNG01	59	1632	1455	9/21/13	3/24/17	Contig	MHH	SAMEA2271927	GCA_000475695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/695/GCA_000475695.1_SA173C	23898187	SA173C
Neisseria meningitidis	487	PRJNA384053	384053	Proteobacteria	Betaproteobacteria	2.13212	51.7	-	NGAY01	125	-	-	9/20/17	9/22/17	Contig	Harvard T.H. Chan School of Public Health	SAMN06827259	GCA_002318295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/295/GCA_002318295.1_ASM231829v1	28904187	NmJPb05x4
Streptococcus pyogenes GA41208	1115820	PRJNA78623	78623	Terrabacteria group	Firmicutes	1.78216	38.4	-	AWTH01	45	1903	1866	10/25/13	12/5/13	Contig	J. Craig Venter Institute	SAMN02436479	GCA_000483645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/645/GCA_000483645.1_SpyogGA41208v1.0	-	GA41208
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.78756	66.1	-	JTQZ01	102	6488	6290	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105640	GCA_000794025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/025/GCA_000794025.1_AZPAE14942	25367914	AZPAE14942
Acinetobacter baumannii MRY10-0558	1340175	PRJDB1132	231361	Proteobacteria	Gammaproteobacteria	3.78274	39	-	BASB01	77	3632	3409	6/4/13	3/15/17	Contig	"National Institute of Infectious Diseases, Japan"	SAMD00036744	GCA_000509325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/509/325/GCA_000509325.1_ASM50932v1	23868126	-
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.17064	35.3	-	LCZR01	38	2249	2084	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435097	GCA_001016035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/035/GCA_001016035.1_ASM101603v1	25946017	418136
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.11441	41.2	-	CZFY01	47	2126	1978	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595242	GCA_900011465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/465/GCA_900011465.1_assembly_GD-0073	-	-
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.6827	38.3	-	FJBD01	37	3406	3265	2/20/16	3/27/17	Contig	SC	SAMEA2064183	GCA_900061975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/975/GCA_900061975.1_10771_3_1	-	2531STDY5467378
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.08998	51.1	-	CXNQ01	161	4394	3938	7/16/15	2/24/17	Scaffold	SC	SAMEA2055846	GCA_001251275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/275/GCA_001251275.1_9870_7_12	-	144555
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.15053	68.2	-	LWYU01	90	7405	6827	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208662	GCA_001978325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/325/GCA_001978325.1_ASM197832v1	-	NAU2B-11
Vibrio cholerae	666	PRJNA308793	308793	Proteobacteria	Gammaproteobacteria	4.09607	47.4	-	LQYD01	116	3912	3639	5/1/16	3/28/17	Contig	"Russian Research Anti-Plague Institute ""Microbe"""	SAMN04413738	GCA_001639085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/085/GCA_001639085.1_ASM163908v1	-	P13762
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.17145	29.1	-	MPGE01	192	3771	3616	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710925	GCA_002302085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/085/GCA_002302085.1_ASM230208v1	-	7454-NonSp/ST54
Vibrio parahaemolyticus	670	PRJNA272927	272927	Proteobacteria	Gammaproteobacteria	5.1151	45.3	-	JXVC01	96	4946	4704	2/20/15	3/25/17	Contig	Health Canada	SAMN03287762	GCA_000878735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/735/GCA_000878735.1_ASM87873v1	25838480	Oct-74
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.86639	56.9	-	LEUU01	10	5974	5692	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280224	GCA_001030795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/795/GCA_001030795.1_Kleb_pneu_CHS81_V1	-	CHS81
Enterococcus faecalis MTmid8	1400806	PRJNA219192	219192	Terrabacteria group	Firmicutes	2.69046	37.6	-	AYKU01	61	2662	2569	4/24/14	3/24/17	Contig	Georgia Institute of Technology	SAMN02729329	GCA_000648135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/135/GCA_000648135.1_Ef.MTmid8.1	24571132	MTmid8
Neisseria gonorrhoeae ALB_2011_03_03	1351778	PRJNA209476	209476	Proteobacteria	Betaproteobacteria	2.0718	52.6	-	ATQB01	329	2332	2093	6/10/15	4/11/17	Scaffold	"Read Laboratory, Emory University"	SAMN02338804	GCA_001026275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/275/GCA_001026275.1_ASM102627v1	-	ALB_2011_03_03
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.055	37.9	-	LNLR01	240	3253	2902	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270937	GCA_001545725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/725/GCA_001545725.1_ASM154572v1	-	VRE-1401098
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.13274	67.7	-	JWLB01	4	4007	3635	3/29/16	3/28/17	Contig	Centers for Disease Control and Prevention	SAMN03216671	GCA_001601775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/775/GCA_001601775.1_ASM160177v1	27303739	I517
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.71913	31.3	-	FBFQ01	44	1758	1631	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683207	GCA_001490895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/895/GCA_001490895.1_SS_2268	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.93499	55.4	-	FKAX01	32	4819	4598	4/5/16	3/28/17	Scaffold	SC	SAMEA2273419	GCA_900076235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/235/GCA_900076235.1_11983_6_95	-	e1832
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96915	64.3	-	FSGP01	34	4960	4814	12/14/16	4/2/17	Contig	SC	SAMEA2070165	GCA_900135305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/305/GCA_900135305.1_10625_4_44	-	44
Pseudomonas sp. B13(2017)	1981746	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	5.9552	63.5	-	NEJX01	61	5463	5272	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771328	GCA_002113245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/245/GCA_002113245.1_ASM211324v1	-	B13(2017)
Streptomyces sp. CC71	1770211	PRJNA305945	305945	Terrabacteria group	Actinobacteria	7.88858	72.5	-	LOSR01	264	7194	6271	3/21/16	3/13/17	Scaffold	CINVESTAV-Langebio	SAMN04335756	GCA_001595515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/515/GCA_001595515.1_ASM159551v1	-	CC71
Streptomyces sp. RTd22	1841249	PRJNA319588	319588	Terrabacteria group	Actinobacteria	11.1852	71.3	-	LXIC01	97	9615	8968	5/9/16	3/14/17	Scaffold	Faculdade de Ciencias Farmaceuticas de Ribeirao Preto - University of Sao Paulo	SAMN04901306	GCA_001640565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/565/GCA_001640565.1_ASM164056v1	-	RTd22
Pseudomonas sp. B14(2017)	1981745	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	5.93248	63.4	-	NEJY01	64	5455	5254	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771329	GCA_002113255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/255/GCA_002113255.1_ASM211325v1	-	B14(2017)
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96994	64.3	-	FSGO01	37	4959	4817	12/14/16	3/21/17	Contig	SC	SAMEA2070600	GCA_900135315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/315/GCA_900135315.1_10625_4_45	-	45
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.97116	55.4	-	FKAY01	34	4864	4636	4/6/16	3/28/17	Scaffold	SC	SAMEA2273420	GCA_900076245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/245/GCA_900076245.1_11983_6_96	-	e1837
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.79897	31	-	FBQF01	59	1861	1749	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683487	GCA_001490915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/915/GCA_001490915.1_H093100604	-	n/a
Bordetella pertussis	520	PRJNA266616	266616	Proteobacteria	Betaproteobacteria	4.10946	67.7	-	JWLA01	3	3975	3611	3/29/16	3/28/17	Contig	Centers for Disease Control and Prevention	SAMN03251820	GCA_001601785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/785/GCA_001601785.1_ASM160178v1	27303739	I488
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.07201	37.9	-	LNLT01	163	3273	2946	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270939	GCA_001545745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/745/GCA_001545745.1_ASM154574v1	-	VRE-1401338
Neisseria gonorrhoeae MIA_2011_03-09	1351789	PRJNA209504	209504	Proteobacteria	Betaproteobacteria	2.14038	52.3	-	ATQN01	321	2416	2184	6/10/15	4/11/17	Scaffold	"Read Laboratory, Emory University"	SAMN02338815	GCA_001026315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/315/GCA_001026315.1_ASM102631v1	-	MIA_2011_03-09
Enterococcus faecalis MTUP9	1400805	PRJNA219191	219191	Terrabacteria group	Firmicutes	2.9734	37.2	-	AYOJ01	66	2985	2849	4/24/14	3/24/17	Contig	Georgia Institute of Technology	SAMN02729328	GCA_000648155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/155/GCA_000648155.1_Ef.MTUP9.1	24571132	MTUP9
Enterobacter hormaechei	158836	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.52363	55.5	-	DFPN01	60	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455538	GCA_002377275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/377/275/GCA_002377275.1_ASM237727v1	28894102	-
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.86403	56.9	-	LEUV01	8	5974	5695	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280225	GCA_001030825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/825/GCA_001030825.1_Kleb_pneu_CHS82_V1	-	CHS82
Vibrio parahaemolyticus	670	PRJNA272927	272927	Proteobacteria	Gammaproteobacteria	5.12672	45.3	-	JXVH01	75	4985	4735	2/20/15	3/25/17	Contig	Health Canada	SAMN03287757	GCA_000878755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/755/GCA_000878755.1_ASM87875v1	25838480	Oct-42
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.22426	28.3	-	MPGA01	120	3878	3737	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710926	GCA_002302115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/115/GCA_002302115.1_ASM230211v1	-	7455-A/ST43
Vibrio cholerae	666	PRJNA308883	308883	Proteobacteria	Gammaproteobacteria	4.01417	47.5	-	LQZR01	133	3841	3629	5/10/16	3/28/17	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN04417201	GCA_001641685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/685/GCA_001641685.1_ASM164168v1	-	M1518
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.13469	68.2	-	LWYT01	106	7390	6818	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208661	GCA_001978345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/345/GCA_001978345.1_ASM197834v1	-	NAU2B-9
Shigella sonnei	624	PRJEB2460	204320	Proteobacteria	Gammaproteobacteria	4.64399	50.8	-	CXFY01	365	5068	4479	7/16/15	2/24/17	Scaffold	SC	SAMEA1027649	GCA_001251295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/295/GCA_001251295.1_6350_1_9	-	sh07-1018
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.4594	38.2	-	FJCQ01	27	3174	3072	2/20/16	3/27/17	Contig	SC	SAMEA2065575	GCA_900062315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/315/GCA_900062315.1_10771_3_9	-	2531STDY5467386
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.23698	41.2	-	CZGQ01	69	2262	2094	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595250	GCA_900011475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/475/GCA_900011475.1_assembly_GD-0088	-	-
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.05186	35.3	-	LCZT01	24	2123	1991	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435099	GCA_001016045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/045/GCA_001016045.1_ASM101604v1	25946017	426748
Acinetobacter baumannii UH0207	1398943	PRJNA218744	218744	Proteobacteria	Gammaproteobacteria	3.79583	39	-	AYGS01	86	3630	3482	1/7/14	3/18/17	Contig	J. Craig Venter Institute	SAMN02597422	GCA_000513795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/795/GCA_000513795.2_gabuh0207_v01	24449752	UH0207
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.48214	66.3	-	JTQU01	83	6246	6055	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105645	GCA_000794045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/045/GCA_000794045.1_AZPAE14947	25367914	AZPAE14947
Streptococcus pyogenes GA03455	1115825	PRJNA78633	78633	Terrabacteria group	Firmicutes	1.77195	38.4	-	AWTY01	55	1880	1842	11/25/13	12/5/13	Contig	J. Craig Venter Institute	SAMN02436398	GCA_000499125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/125/GCA_000499125.1_SpyogGA03455v1.0	-	GA03455
Neisseria meningitidis	487	PRJNA384053	384053	Proteobacteria	Betaproteobacteria	2.10994	51.8	-	NGAZ01	111	-	-	9/20/17	9/22/17	Contig	Harvard T.H. Chan School of Public Health	SAMN06827258	GCA_002318305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/305/GCA_002318305.1_ASM231830v1	28904187	NmJPb05x3
Helicobacter pylori SA144A	1345544	PRJEB4059	216010	Proteobacteria	delta/epsilon subdivisions	1.63017	38.6	-	CBNJ01	39	1588	1311	9/21/13	4/10/17	Contig	MHH	SAMEA2272313	GCA_000475715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/715/GCA_000475715.1_SA144A	23898187	SA144A
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06688	39.6	-	COEZ02	100	2253	2039	3/22/15	3/11/17	Contig	SC	SAMEA1463135	GCA_001088445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/445/GCA_001088445.2_7622_5_65	-	MD5107
Ureaplasma urealyticum serovar 10 str. ATCC 33699	565575	PRJNA20247	20247	Terrabacteria group	Tenericutes	0.874478	25.8	chromosome:NC_011374.1/CP001184.1	-	1	694	639	10/16/08	3/29/17	Complete Genome	J. Craig Venter Institute	SAMN02603440	GCA_000021265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/021/265/GCA_000021265.1_ASM2126v1	-	ATCC 33699
Mycobacterium tuberculosis TKK_03_0150	1448454	PRJNA235459	235459	Terrabacteria group	Actinobacteria	4.40168	65.6	-	JJYK01	7	4277	4110	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585949	GCA_000652255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/255/GCA_000652255.1_Myco_tube_TKK_03_0150_V1	-	TKK_03_0150
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.46619	32.1	-	JULM01	104	2419	2318	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198192	GCA_001075525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/525/GCA_001075525.1_ASM107552v1	26230489	972_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.19203	35.3	-	NHVA01	62	5590	5298	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163264	GCA_002199265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/265/GCA_002199265.1_ASM219926v1	-	MOD1_Bc199
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09364	37.9	-	JOZW01	31	3135	3041	7/15/14	2/26/17	Contig	Cornell University	SAMN02741557	GCA_000728495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/495/GCA_000728495.1_ASM72849v1	-	FSL R8-6721
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.65934	30.5	-	CUQW01	17	1760	1671	3/31/15	3/18/17	Contig	SC	SAMEA1010619	GCA_001230545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/545/GCA_001230545.1_7092_1_55	-	OXC6502
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20093430	1412512	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.6859	52.2	chromosome:NZ_CP007303.2/CP007303.2	-	1	4709	4447	4/1/14	3/2/17	Chromosome	LFZ	SAMN02384233	GCA_000623875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/875/GCA_000623875.2_ASM62387v2	24786953	SA20093430
Staphylococcus aureus M1170	1158472	PRJNA88747	88747	Terrabacteria group	Firmicutes	2.89861	32.9	-	AIYR01	2	3009	2860	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809064	GCA_000362905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/905/GCA_000362905.1_Stap_aure_M1170_V1	-	M1170
Staphylococcus aureus M1188	1158473	PRJNA88749	88749	Terrabacteria group	Firmicutes	2.88804	32.8	-	AIYS01	5	3026	2858	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809065	GCA_000362925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/925/GCA_000362925.1_Stap_aure_M1188_V1	-	M1188
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20093538	1412522	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007304.2/CP007304.2	-	1	4709	4449	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384243	GCA_000623895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/895/GCA_000623895.2_ASM62389v2	24786953	SA20093538
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.65365	30.4	-	CUJL01	21	1756	1655	3/31/15	3/18/17	Contig	SC	SAMEA1010666	GCA_001230565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/565/GCA_001230565.1_7038_3_53	-	OXC6303
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09552	37.9	-	JOZX01	23	3132	3046	7/15/14	2/26/17	Contig	Cornell University	SAMN02741558	GCA_000728505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/505/GCA_000728505.1_ASM72850v1	-	FSL R8-6725
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.19345	35.3	-	NHUW01	62	5599	5305	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163271	GCA_002199275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/275/GCA_002199275.1_ASM219927v1	-	MOD1_Bc192
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.48893	31.9	-	JUMV01	153	2425	2342	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198157	GCA_001075775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/775/GCA_001075775.1_ASM107577v1	26230489	938_SEPI
Mycobacterium tuberculosis TKK_03_0153	1448455	PRJNA235460	235460	Terrabacteria group	Actinobacteria	4.40304	65.6	-	JJYJ01	5	4277	4110	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585950	GCA_000652275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/275/GCA_000652275.1_Myco_tube_TKK_03_0153_V1	-	TKK_03_0153
Blattabacterium sp. (Blaberus giganteus)	1186051	PRJNA163677	163677	FCB group	Bacteroidetes/Chlorobi group	0.632588	25.7281	chromosome:NC_017924.1/CP003535.1; plasmid pBGIBA:NC_017925.1/CP003536.1	-	2	624	583	5/14/12	4/17/17	Complete Genome	Yale University	SAMN02604334	GCA_000262715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/715/GCA_000262715.1_ASM26271v1	22843586	BGIGA
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.1638	39.5	-	CNUQ02	206	2324	2102	3/23/15	3/11/17	Contig	SC	SAMEA1032465	GCA_001088525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/525/GCA_001088525.2_6999_6_11	-	277394
Helicobacter pylori SA40A	1345526	PRJEB4051	215922	Proteobacteria	delta/epsilon subdivisions	1.646	38.5	-	CBNN01	48	1595	1430	9/21/13	3/24/17	Contig	MHH	SAMEA2272704	GCA_000475735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/735/GCA_000475735.1_SA40A	23898187	SA40A
Neisseria meningitidis	487	PRJNA384053	384053	Proteobacteria	Betaproteobacteria	2.20121	51.7	-	NGBA01	131	-	-	9/20/17	9/22/17	Contig	Harvard T.H. Chan School of Public Health	SAMN06827257	GCA_002318315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/315/GCA_002318315.1_ASM231831v1	28904187	NmJPb05x2
Streptococcus pyogenes GA03799	1115826	PRJNA78635	78635	Terrabacteria group	Firmicutes	1.72425	38.4	-	AWTZ01	39	1781	1745	11/25/13	12/5/13	Contig	J. Craig Venter Institute	SAMN02436565	GCA_000499225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/225/GCA_000499225.1_SpyogGA03799v1.0	-	GA03799
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.83592	66.1	-	JTSD01	89	6528	6344	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105610	GCA_000794055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/055/GCA_000794055.1_AZPAE14912	25367914	AZPAE14912
Acinetobacter baumannii UH0807	1398945	PRJNA218746	218746	Proteobacteria	Gammaproteobacteria	4.04798	39	-	AYGQ01	234	3963	3790	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597420	GCA_000515435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/435/GCA_000515435.1_gabuh0807_v01	24449752	UH0807
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.12999	35.5	-	LCZV01	26	2205	2073	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435101	GCA_001016065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/065/GCA_001016065.1_ASM101606v1	25946017	AH20834
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	1.98877	41.2	-	CZGK01	109	2013	1861	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595252	GCA_900011485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/485/GCA_900011485.1_assembly_GD-0094	-	-
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.41336	38.3	-	FJFE01	24	3120	3015	2/20/16	3/27/17	Contig	SC	SAMEA2080615	GCA_900062325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/325/GCA_900062325.1_10625_2_38	-	2532STDY5467511
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.88726	50.7	-	CWWC01	418	5496	4706	7/16/15	2/24/17	Scaffold	SC	SAMEA3345094	GCA_001251315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/315/GCA_001251315.1_Sg_201403906_CAACTA_L001	-	201403906_1
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.28623	68.1	-	LWYW01	135	7546	6962	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208664	GCA_001978365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/365/GCA_001978365.1_ASM197836v1	-	NAU13B-1
Vibrio cholerae	666	PRJNA308887	308887	Proteobacteria	Gammaproteobacteria	3.96116	47.5	-	LQZS01	128	3768	3549	5/10/16	3/28/17	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN04417214	GCA_001641705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/705/GCA_001641705.1_ASM164170v1	-	M1524
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.19652	29.4	-	MPEW01	621	3756	3567	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710927	GCA_002302125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/125/GCA_002302125.1_ASM230212v1	-	7456-DH/ST42
Vibrio parahaemolyticus	670	PRJNA272927	272927	Proteobacteria	Gammaproteobacteria	5.09999	45.3	-	JXVJ01	79	4930	4685	2/20/15	3/25/17	Contig	Health Canada	SAMN03287714	GCA_000878785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/785/GCA_000878785.1_ASM87878v1	25838480	Sep-16
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.89193	56.9	-	LEUW01	11	5954	5664	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280226	GCA_001030835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/835/GCA_001030835.1_Kleb_pneu_CHS83_V1	-	CHS83
Enterobacter hormaechei	158836	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.42072	55.7	-	DFRB01	21	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06453471	GCA_002378045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/378/045/GCA_002378045.1_ASM237804v1	28894102	-
Enterococcus faecalis NJ44	1400807	PRJNA219193	219193	Terrabacteria group	Firmicutes	2.91373	37.2	-	AYOK01	129	2941	2804	4/24/14	3/24/17	Contig	Georgia Institute of Technology	SAMN02729324	GCA_000648175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/175/GCA_000648175.1_Ef.NJ44.1	24571132	NJ44
Neisseria gonorrhoeae MIA_2011_05-10	1351791	PRJNA209508	209508	Proteobacteria	Betaproteobacteria	2.12587	52.4	-	ATQP01	270	2455	2156	6/10/15	4/11/17	Scaffold	"Read Laboratory, Emory University"	SAMN02338819	GCA_001026335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/335/GCA_001026335.1_ASM102633v1	-	MIA_2011_05-10
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.22964	37.9	-	LNLS01	225	3497	3137	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270938	GCA_001545775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/775/GCA_001545775.1_ASM154577v1	-	VRE-1401318
Bordetella pertussis	520	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	4.12333	67.7	-	NBTQ01	1	3982	3458	4/10/17	4/13/17	Contig	US Food and Drug Administration 	SAMN04875532	GCA_002083095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/083/095/GCA_002083095.1_ASM208309v1	-	FDAARGOS_195
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65975	31.4	-	FBBM01	20	1723	1625	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683100	GCA_001490935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/935/GCA_001490935.1_EC6168	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.73221	55.4	-	FKAZ01	34	4680	4469	4/5/16	3/28/17	Scaffold	SC	SAMEA2273421	GCA_900076255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/255/GCA_900076255.1_12045_5_1	-	e1873
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23177	64	-	FSGR01	26	5271	5155	12/14/16	3/21/17	Contig	SC	SAMEA2071189	GCA_900135325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/325/GCA_900135325.1_10625_4_46	-	46
Pseudomonas sp. B11(2017)	1981748	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.22355	64.8	-	NEJV01	60	5608	5451	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771326	GCA_002113285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/285/GCA_002113285.1_ASM211328v1	-	B11(2017)
Streptomyces sp. NBRC 109436	1559982	PRJDB3206	316422	Terrabacteria group	Actinobacteria	9.88865	72	-	BBON01	259	8255	7517	3/24/16	3/13/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00020875	GCA_001652895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/895/GCA_001652895.1_ASM165289v1	-	NBRC 109436
Streptomyces sp. PTY087I2	1819298	PRJNA315873	315873	Terrabacteria group	Actinobacteria	8.16411	71.5	-	LZRD01	83	7147	6782	7/19/16	3/13/17	Scaffold	University of Connecticut	SAMN04571751	GCA_001687325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/325/GCA_001687325.1_ASM168732v1	-	PTY087I2
Pseudomonas sp. B10(2017)	1981749	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	5.6525	63.1	-	NEJU01	51	5238	5079	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771325	GCA_002113295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/295/GCA_002113295.1_ASM211329v1	-	B10(2017)
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23323	64	-	FVKV01	20	5263	5150	3/10/17	3/18/17	Contig	SC	SAMEA2070166	GCA_900135335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/335/GCA_900135335.1_10625_4_47	-	47
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.69322	55.4	-	FKBA01	34	4627	4407	4/6/16	3/28/17	Scaffold	SC	SAMEA2273422	GCA_900076265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/265/GCA_900076265.1_12045_5_2	-	e1879
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.73013	31.3	-	FBDW01	31	1808	1706	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683165	GCA_001490955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/955/GCA_001490955.1_SS_2294	-	n/a
Bordetella pertussis	520	PRJNA390469	390469	Proteobacteria	Betaproteobacteria	3.91044	67.8	-	NIWY01	276	4160	3301	8/25/17	8/28/17	Contig	Curtin University	SAMN07235949	GCA_002270325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/270/325/GCA_002270325.1_ASM227032v1	-	ID20
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.14117	37.8	-	LNLZ01	159	3361	3016	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270945	GCA_001545785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/785/GCA_001545785.1_ASM154578v1	-	VRE-1402215
Neisseria gonorrhoeae NYC_2011_05_07	1351795	PRJNA209517	209517	Proteobacteria	Betaproteobacteria	2.1018	52.4	-	ATQT01	339	2375	2141	6/10/15	3/26/17	Scaffold	"Read Laboratory, Emory University"	SAMN02338821	GCA_001026345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/345/GCA_001026345.1_ASM102634v1	-	NYC_2011_05_07
Enterococcus faecalis NY9	1400808	PRJNA219194	219194	Terrabacteria group	Firmicutes	2.98386	37	-	AYOL01	113	3013	2864	4/24/14	3/24/17	Contig	Georgia Institute of Technology	SAMN02729322	GCA_000648195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/195/GCA_000648195.1_Ef.NY9.1	24571132	NY9
Enterobacter hormaechei	158836	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.51547	55.5	-	DGQX01	51	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451892	GCA_002389795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/795/GCA_002389795.1_ASM238979v1	28894102	-
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.8675	56.9	-	LEUX01	13	5963	5696	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280227	GCA_001030845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/845/GCA_001030845.1_Kleb_pneu_CHS84_V1	-	CHS84
Vibrio parahaemolyticus	670	PRJNA272927	272927	Proteobacteria	Gammaproteobacteria	5.1043	45.3	-	JXVI01	58	4945	4706	2/20/15	3/25/17	Contig	Health Canada	SAMN03287715	GCA_000878805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/805/GCA_000878805.1_ASM87880v1	25838480	Oct-41
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.54518	29.1	-	MPEX01	488	4074	3901	9/14/17	9/18/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710929	GCA_002302145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/145/GCA_002302145.1_ASM230214v1	-	7458-N/ST10
Vibrio cholerae O1 biovar El Tor	686	PRJNA323526	323526	Proteobacteria	Gammaproteobacteria	3.95742	47.5	-	LYXT01	51	3806	3551	6/13/16	3/28/17	Contig	Irkutsk Antiplague Research Institute of Rospotrebnadzor	SAMN05180557	GCA_001661905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/661/905/GCA_001661905.1_ASM166190v1	-	I-1187
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.13904	68.2	-	LWYV01	137	7389	6819	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208663	GCA_001978385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/385/GCA_001978385.1_ASM197838v1	-	NAU2B-12
Shigella sonnei	624	PRJEB2460	204320	Proteobacteria	Gammaproteobacteria	4.78873	50.7	-	CXGS01	468	5604	4577	7/16/15	2/24/17	Scaffold	SC	SAMEA1027670	GCA_001251335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/335/GCA_001251335.1_7353_1_22	-	H113080349
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.41243	38.3	-	FJFK01	18	3120	3010	2/20/16	3/28/17	Contig	SC	SAMEA2077524	GCA_900062345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/345/GCA_900062345.1_10625_2_7	-	2532STDY5467480
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.0439	41.2	-	CZDM01	44	2049	1947	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595179	GCA_900011545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/545/GCA_900011545.1_assembly_890267	-	-
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.16264	35.3	-	LCZQ01	21	2242	2103	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435096	GCA_001016095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/095/GCA_001016095.1_ASM101609v1	25946017	408523
Acinetobacter baumannii UH1007	1398946	PRJNA218747	218747	Proteobacteria	Gammaproteobacteria	3.99178	39.1	-	AYGP01	122	3877	3723	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597419	GCA_000515455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/455/GCA_000515455.1_gabuh1007_v01	24449752	UH1007
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.09243	65.7	-	JTRI01	105	6863	6611	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105631	GCA_000794085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/085/GCA_000794085.1_AZPAE14933	25367914	AZPAE14933
Streptococcus pyogenes MGAS2111	561522	PRJNA31303	31303	Terrabacteria group	Firmicutes	2.01965	39	-	JRLI01	126	2314	2203	9/25/14	9/25/14	Contig	University of Maryland IGS	SAMN00000656	GCA_000758065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/065/GCA_000758065.1_ASM75806v1	-	MGAS2111
Neisseria meningitidis	487	PRJNA384053	384053	Proteobacteria	Betaproteobacteria	2.11322	52	-	NGBB01	119	-	-	9/20/17	9/22/17	Contig	Harvard T.H. Chan School of Public Health	SAMN06827256	GCA_002318345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/345/GCA_002318345.1_ASM231834v1	28904187	NmJPb05x1
Helicobacter pylori SA168C	1345574	PRJEB4085	216043	Proteobacteria	delta/epsilon subdivisions	1.64696	39	-	CBOC01	71	1627	1421	9/21/13	3/24/17	Contig	MHH	SAMEA2272157	GCA_000475755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/755/GCA_000475755.1_SA168C	23898187	SA168C
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1836	39.7	-	CLUL01	80	2387	2147	3/21/15	3/4/17	Contig	SC	SAMEA1025738	GCA_001088545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/545/GCA_001088545.1_6983_2_22	-	SMRU2230
Buchnera aphidicola str. Ak (Acyrthosiphon kondoi)	1005090	PRJNA65481	65481	Proteobacteria	Gammaproteobacteria	0.653223	25.7113	chromosome:NC_017256.1/CP002645.1; plasmid pLeu:NC_017257.1/CP002646.1; plasmid pTrp:NC_017258.1/CP002647.1	-	3	630	582	9/7/11	3/14/17	Complete Genome	Yale University	SAMN02604329	GCA_000225445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/445/GCA_000225445.1_ASM22544v1	21912528	Ak
Mycobacterium tuberculosis TKK_03_0154	1448456	PRJNA235461	235461	Terrabacteria group	Actinobacteria	4.41356	65.5	-	JJYI01	4	4292	4107	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585951	GCA_000652295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/295/GCA_000652295.1_Myco_tube_TKK_03_0154_V1	-	TKK_03_0154
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.47099	31.9	-	JUMM01	114	2417	2318	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198166	GCA_001075795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/795/GCA_001075795.1_ASM107579v1	26230489	946_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	4.95484	35.4	-	NHVE01	59	5383	5058	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163260	GCA_002199315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/315/GCA_002199315.1_ASM219931v1	-	MOD1_Bc210
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	2.88791	37.9	-	JOZV01	17	2900	2816	7/15/14	2/26/17	Contig	Cornell University	SAMN02741556	GCA_000728525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/525/GCA_000728525.1_ASM72852v1	-	FSL R8-6717
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.67722	30.4	-	CULH01	17	1762	1674	3/31/15	3/18/17	Contig	SC	SAMEA1010465	GCA_001230585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/585/GCA_001230585.1_7065_7_1	-	OXC6347
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20093543	1412520	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68591	52.2	chromosome:NZ_CP007305.2/CP007305.2	-	1	4710	4450	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384241	GCA_000623915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/915/GCA_000623915.2_ASM62391v2	24786953	SA20093543
Staphylococcus aureus M1198	1158474	PRJNA88751	88751	Terrabacteria group	Firmicutes	2.86556	32.8	-	AIYT01	6	3014	2850	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809066	GCA_000362945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/945/GCA_000362945.1_Stap_aure_M1198_V1	-	M1198
Staphylococcus aureus M1199	1158475	PRJNA88753	88753	Terrabacteria group	Firmicutes	2.94035	33.1	-	AIYU01	5	3064	2895	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809067	GCA_000362965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/965/GCA_000362965.1_Stap_aure_M1199_V1	-	M1199
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20093784	1412509	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007306.2/CP007306.2	-	1	4708	4449	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384230	GCA_000623935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/935/GCA_000623935.2_ASM62393v2	24786953	SA20093784
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.58482	30.5	-	CURH01	17	1658	1560	3/31/15	3/18/17	Contig	SC	SAMEA1010540	GCA_001230605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/605/GCA_001230605.1_7092_1_65	-	OXC6512
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09447	37.9	-	JOZZ01	23	3146	3045	7/15/14	2/26/17	Contig	Cornell University	SAMN02741560	GCA_000728565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/565/GCA_000728565.1_ASM72856v1	-	FSL R8-6739
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.92388	34.9	-	NHVH01	217	6350	5905	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163257	GCA_002199335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/335/GCA_002199335.1_ASM219933v1	-	MOD1_Bc207
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.47021	31.9	-	JUML01	112	2419	2319	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198167	GCA_001075805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/805/GCA_001075805.1_ASM107580v1	26230489	947_SEPI
Mycobacterium tuberculosis TKK_03_0156	1448458	PRJNA235463	235463	Terrabacteria group	Actinobacteria	4.40871	65.6	-	JJYH01	4	4295	4098	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585953	GCA_000652315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/315/GCA_000652315.1_Myco_tube_TKK_03_0156_V1	-	TKK_03_0156
Mycoplasma yeatsii GM274B	743967	PRJNA46457	46457	Terrabacteria group	Tenericutes	0.895051	25.7	chromosome:NZ_CP007520.1/CP007520.1	-	1	788	735	2/13/15	4/10/17	Complete Genome	University of Missouri	SAMN02700145	GCA_000875755.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/875/755/GCA_000875755.1_ASM87575v1	25908137	GM274B
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.05475	39.6	-	CLEC01	66	2272	2025	3/21/15	3/6/17	Contig	SC	SAMEA1026095	GCA_001088565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/565/GCA_001088565.1_6899_6_13	-	SMRU2077
Helicobacter pylori SA156A	1345554	PRJEB4065	216024	Proteobacteria	delta/epsilon subdivisions	1.69973	39	-	CBNR01	50	1677	1474	9/21/13	3/24/17	Contig	MHH	SAMEA2272532	GCA_000475775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/775/GCA_000475775.1_SA156A	23898187	SA156A
Neisseria meningitidis	487	PRJNA384053	384053	Proteobacteria	Betaproteobacteria	2.12667	51.8	-	NGBD01	128	-	-	9/20/17	9/22/17	Contig	Harvard T.H. Chan School of Public Health	SAMN06827254	GCA_002318375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/375/GCA_002318375.1_ASM231837v1	28904187	NmJP14x3
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.44367	37.7	-	LRGM01	399	1604	1302	5/6/16	5/6/16	Contig	Menzies School of Health Research	SAMN03988125	GCA_001638255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/255/GCA_001638255.1_ASM163825v1	-	SST2090-1
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.54302	66	-	JTVC01	192	6292	6008	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105533	GCA_000794165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/165/GCA_000794165.1_AZPAE14832	25367914	AZPAE14832
Acinetobacter baumannii UH10007	1398947	PRJNA218748	218748	Proteobacteria	Gammaproteobacteria	4.10546	38.8	-	AYGO01	234	4052	3867	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597418	GCA_000515475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/475/GCA_000515475.1_gabuh10007_v01	24449752	UH10007
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.178	35.5	-	LCZS01	50	2296	2096	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435098	GCA_001016115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/115/GCA_001016115.1_ASM101611v1	25946017	418849
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	1.98498	41.2	-	CZDT01	34	1993	1895	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595181	GCA_900011765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/765/GCA_900011765.1_assembly_902409	-	-
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.38946	38.2	-	FJFM01	23	3101	3000	2/20/16	3/27/17	Contig	SC	SAMEA2077534	GCA_900062355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/355/GCA_900062355.1_10625_2_40	-	2532STDY5467513
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.70744	50.7	-	CXKN01	407	5216	4518	7/17/15	2/24/17	Scaffold	SC	SAMEA2004899	GCA_001251355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/355/GCA_001251355.1_8290_4_44	-	99767
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.12198	68.2	-	LWYX01	131	7389	6804	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208665	GCA_001978405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/405/GCA_001978405.1_ASM197840v1	-	NAU14A-1
Vibrio cholerae	666	PRJNA325600	325600	Proteobacteria	Gammaproteobacteria	4.08394	47.4	-	MDYJ01	49	3954	3711	9/2/16	3/28/17	Contig	Karolinska Institutet	SAMN05578962	GCA_001718095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/095/GCA_001718095.1_ASM171809v1	-	L15
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.07987	28.3	-	MPEY01	72	3740	3611	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710930	GCA_002302165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/165/GCA_002302165.1_ASM230216v1	-	7459-G/ST8
Vibrio parahaemolyticus	670	PRJNA272927	272927	Proteobacteria	Gammaproteobacteria	5.14328	45.2	-	JXVK01	98	4989	4748	2/20/15	3/25/17	Contig	Health Canada	SAMN03287713	GCA_000878815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/815/GCA_000878815.1_ASM87881v1	25838480	04-1290
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.81281	56.8	-	LEUY01	5	5884	5607	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280228	GCA_001030875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/875/GCA_001030875.1_Kleb_pneu_CHS85_V1	-	CHS85
Enterobacter hormaechei	158836	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.42376	55.7	-	DGQV01	64	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451894	GCA_002390885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/885/GCA_002390885.1_ASM239088v1	28894102	-
Enterococcus faecalis	1351	PRJNA255947	255947	Terrabacteria group	Firmicutes	2.96543	37.2	-	JPWN01	13	3053	2916	8/13/14	3/24/17	Contig	Cork Institute of Technology	SAMN02947222	GCA_000739195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/195/GCA_000739195.1_ASM73919v1	25212626	NGS-ED-1009
Neisseria gonorrhoeae MU_NG3	1351798	PRJNA209599	209599	Proteobacteria	Betaproteobacteria	2.03638	52.6	-	ATQW01	322	2301	2051	6/10/15	4/11/17	Scaffold	"Read Laboratory, Emory University"	SAMN02338824	GCA_001026395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/395/GCA_001026395.1_ASM102639v1	-	MU_NG3
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.14871	37.8	-	LNLV01	166	3334	3022	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270941	GCA_001545795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/795/GCA_001545795.1_ASM154579v1	-	VRE-1401859
Bordetella pertussis	520	PRJNA400354	400354	Proteobacteria	Betaproteobacteria	3.51871	67.1	-	NSCW01	1240	3985	2951	9/11/17	9/11/17	Contig	Christian Medical College	SAMN07566686	GCA_002289365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/365/GCA_002289365.1_ASM228936v1	-	VBD1
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.6605	31.4	-	FBBH01	28	1720	1622	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683097	GCA_001490975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/975/GCA_001490975.1_EC3786	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.85665	55.2	-	FKIU01	47	4719	4482	4/11/16	3/28/17	Scaffold	SC	SAMEA2273423	GCA_900076275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/275/GCA_900076275.1_12045_5_3	-	e1889
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23049	64	-	FVKU01	21	5267	5155	3/10/17	3/18/17	Contig	SC	SAMEA2070696	GCA_900135345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/345/GCA_900135345.1_10625_4_51	-	51
Pseudomonas sp. R9(2017)	1981674	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	5.99033	63.8	-	NEHD01	45	5497	5323	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771400	GCA_002113325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/325/GCA_002113325.1_ASM211332v1	-	R9(2017)
Streptomyces sp. EN16	212773	PRJNA338712	338712	Terrabacteria group	Actinobacteria	8.57087	71.5	-	MJAF01	236	7914	7302	9/25/16	3/13/17	Scaffold	"i3S, University of Porto"	SAMN05567309	GCA_001746285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/285/GCA_001746285.1_ASM174628v1	-	EN16
Streptomyces sp. LUP47B	1890286	PRJNA338715	338715	Terrabacteria group	Actinobacteria	10.9989	70.3	-	MJAH01	56	10084	9428	9/25/16	6/21/17	Scaffold	"i3S, University of Porto"	SAMN05567319	GCA_001746295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/295/GCA_001746295.1_ASM174629v1	-	LUP47b
Pseudomonas sp. R44(2017)	1981679	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.22014	64.8	-	NEHI01	58	5591	5428	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771395	GCA_002113335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/335/GCA_002113335.1_ASM211333v1	-	R44(2017)
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23426	64	-	FSGS01	27	5271	5155	12/14/16	3/21/17	Contig	SC	SAMEA2071190	GCA_900135355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/355/GCA_900135355.1_10625_4_49	-	49
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.77956	55.8	-	FKBB01	95	4752	4492	4/6/16	4/20/17	Scaffold	SC	SAMEA2273425	GCA_900076285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/285/GCA_900076285.1_12082_4_53	-	e1942
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.79568	31	-	FBPP01	72	1838	1708	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683466	GCA_001490995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/995/GCA_001490995.1_H093580632	-	n/a
Bordetella pertussis	520	PRJNA400355	400355	Proteobacteria	Betaproteobacteria	3.53713	67.1	-	NSCX01	1232	4046	3015	9/11/17	9/11/17	Contig	Christian Medical College	SAMN07566688	GCA_002289405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/405/GCA_002289405.1_ASM228940v1	-	VBD2
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.10972	37.9	-	LNLG01	218	3323	2991	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270926	GCA_001545835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/835/GCA_001545835.1_ASM154583v1	-	VRE-1300578
Neisseria gonorrhoeae MU_NG6	1351801	PRJNA209633	209633	Proteobacteria	Betaproteobacteria	2.15348	52.3	-	ATQZ01	297	2494	2141	6/10/15	8/28/17	Scaffold	"Read Laboratory, Emory University"	SAMN02338827	GCA_001026415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/415/GCA_001026415.1_ASM102641v1	-	MU_NG6
Enterococcus faecalis	1351	PRJNA257022	257022	Terrabacteria group	Firmicutes	3.01051	37.3	-	JPTY01	37	3100	2935	10/3/14	3/24/17	Contig	"The Affiliated Shenzhen Nanshan Hospital of Guangdong Medical College, Shenzhen, China;"	SAMN02950876	GCA_000763355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/355/GCA_000763355.1_ASM76335v1	-	LRS29212
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.9124	56.9	-	LEUZ01	11	6013	5724	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280231	GCA_001030905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/905/GCA_001030905.1_Kleb_pneu_CHS88_V1	-	CHS88
Vibrio parahaemolyticus	670	PRJNA275536	275536	Proteobacteria	Gammaproteobacteria	5.12924	45.3	-	JYNG01	138	4921	4703	3/12/15	3/25/17	Contig	Health Canada	SAMN03349598	GCA_000951795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/951/795/GCA_000951795.1_ASM95179v1	-	Apr-49
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.40376	28.7	-	MPFA01	166	4092	3940	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710933	GCA_002302185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/185/GCA_002302185.1_ASM230218v1	-	7463-E/ST6
Vibrio cholerae	666	PRJNA339415	339415	Proteobacteria	Gammaproteobacteria	3.99368	47.6	-	MIKH01	106	3774	3619	9/15/16	3/28/17	Contig	Georgia Institute of Technology	SAMN05590402	GCA_001729125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/125/GCA_001729125.1_ASM172912v1	-	857
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.12636	68.2	-	LWYY01	129	7396	6815	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208666	GCA_001978415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/415/GCA_001978415.1_ASM197841v1	-	NAU14A-2
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.69238	50.7	-	CXJS01	491	5288	4526	7/16/15	2/24/17	Scaffold	SC	SAMEA2003905	GCA_001251375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/375/GCA_001251375.1_8290_4_10	-	95013
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.38851	38.2	-	FJFN01	19	3099	3000	2/20/16	3/27/17	Contig	SC	SAMEA2077498	GCA_900062365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/365/GCA_900062365.1_10625_2_42	-	2532STDY5467515
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.08343	41.2	-	CZGM01	35	2109	2002	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595251	GCA_900011775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/775/GCA_900011775.1_assembly_GD-0090	-	-
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.19187	35.5	-	LCZU01	37	2312	2176	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435100	GCA_001016135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/135/GCA_001016135.1_ASM101613v1	25946017	446329
Acinetobacter baumannii UH0707	1398944	PRJNA218745	218745	Proteobacteria	Gammaproteobacteria	4.04328	39	-	AYGR01	227	3945	3782	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597421	GCA_000515495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/495/GCA_000515495.1_gabuh0707_v01	24449752	UH0707
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.18479	65.6	-	JTVD01	149	7009	6755	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105532	GCA_000794175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/175/GCA_000794175.1_AZPAE14831	25367914	AZPAE14831
Streptococcus pyogenes	1314	PRJNA292736	292736	Terrabacteria group	Firmicutes	1.43268	37.8	-	LRGT01	373	1561	1308	5/6/16	5/6/16	Contig	Menzies School of Health Research	SAMN03988127	GCA_001638565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/565/GCA_001638565.1_ASM163856v1	-	SST2097-1
Neisseria meningitidis	487	PRJNA384053	384053	Proteobacteria	Betaproteobacteria	2.11786	51.8	-	NGBC01	143	-	-	9/20/17	9/22/17	Contig	Harvard T.H. Chan School of Public Health	SAMN06827255	GCA_002318385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/385/GCA_002318385.1_ASM231838v1	28904187	NmJP14x4
Helicobacter pylori SA155A	1345552	PRJEB4063	216018	Proteobacteria	delta/epsilon subdivisions	1.66426	38.4	-	CBNZ01	33	1618	1351	9/21/13	4/10/17	Contig	MHH	SAMEA2272410	GCA_000475795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/795/GCA_000475795.1_SA155A	23898187	SA155A
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09245	39.6	-	CNYI02	172	2257	2050	3/23/15	3/11/17	Contig	SC	SAMEA1463115	GCA_001088645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/645/GCA_001088645.2_7553_4_4	-	ND6116
Mycoplasma cynos C142	1246955	PRJEB590	183735	Terrabacteria group	Tenericutes	0.998123	25.7	chromosome:NC_019949.1/HF559394.1	-	1	818	753	12/12/12	4/17/17	Complete Genome	RVC	SAMEA2272626	GCA_000328725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/725/GCA_000328725.1_ASM32872v1	-	C142
Mycobacterium tuberculosis TKK_03_0158	1448459	PRJNA235464	235464	Terrabacteria group	Actinobacteria	4.40958	65.6	-	JJYG01	5	4289	4122	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585954	GCA_000652335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/335/GCA_000652335.1_Myco_tube_TKK_03_0158_V1	-	TKK_03_0158
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.58985	31.8	-	JULQ01	113	2540	2445	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198188	GCA_001075855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/855/GCA_001075855.1_ASM107585v1	26230489	968_SHAE
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.1978	35.3	-	NHUA01	93	5628	5293	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163327	GCA_002199345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/345/GCA_002199345.1_ASM219934v1	-	MOD1_Bc59
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.06067	37.8	-	JPAG01	28	3140	3033	7/15/14	2/26/17	Contig	Cornell University	SAMN02741567	GCA_000728585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/585/GCA_000728585.1_ASM72858v1	-	FSL R8-6836
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.77397	30.3	-	CUSL01	21	1880	1793	3/31/15	3/18/17	Contig	SC	SAMEA1010606	GCA_001230685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/685/GCA_001230685.1_7092_1_92	-	OXC6539
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20093788	1412511	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007307.2/CP007307.2	-	1	4710	4448	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384232	GCA_000623955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/955/GCA_000623955.2_ASM62395v2	24786953	SA20093788
Staphylococcus aureus M1215	1158476	PRJNA88755	88755	Terrabacteria group	Firmicutes	2.85479	32.9	-	AIYV01	2	2998	2833	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809068	GCA_000362985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/362/985/GCA_000362985.1_Stap_aure_M1215_V1	-	M1215
Staphylococcus aureus M1216	1158477	PRJNA88757	88757	Terrabacteria group	Firmicutes	2.79338	32.8	-	AIYW01	1	2874	2705	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809069	GCA_000363005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/005/GCA_000363005.1_Stap_aure_M1216_V1	-	M1216
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20093950	1412519	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007308.2/CP007308.2	-	1	4707	4447	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384240	GCA_000623975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/975/GCA_000623975.2_ASM62397v2	24786953	SA20093950
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66352	30.5	-	CUUP01	15	1766	1668	3/31/15	3/18/17	Contig	SC	SAMEA1400981	GCA_001230705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/705/GCA_001230705.1_7213_3_59	-	OXC6602
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09467	37.9	-	JPBM01	22	3141	3045	7/15/14	2/26/17	Contig	Cornell University	SAMN02741599	GCA_000728595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/595/GCA_000728595.1_ASM72859v1	-	FSL R8-7460
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.20494	35.3	-	NHUC01	53	5611	5316	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163325	GCA_002199365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/365/GCA_002199365.1_ASM219936v1	-	MOD1_Bc61
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.62469	31.9	-	JUNS01	85	2587	2463	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198134	GCA_001075885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/885/GCA_001075885.1_ASM107588v1	26230489	92_SEPI
Mycobacterium tuberculosis TKK_03_0159	1448460	PRJNA235465	235465	Terrabacteria group	Actinobacteria	4.4057	65.6	-	JJYF01	2	4280	4112	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585955	GCA_000652355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/355/GCA_000652355.1_Myco_tube_TKK_03_0159_V1	-	TKK_03_0159
Mycoplasma penetrans HF-2	272633	PRJNA176	176	Terrabacteria group	Tenericutes	1.35863	25.7	chromosome:NC_004432.1/BA000026.2	-	1	1068	1016	12/10/02	4/17/17	Complete Genome	NIID Japan	SAMD00061084	GCA_000011225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/225/GCA_000011225.1_ASM1122v1	12466555	HF-2
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11408	39.7	-	CMRW01	114	2362	2140	3/23/15	3/11/17	Contig	SC	SAMEA2062383	GCA_001088685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/685/GCA_001088685.1_9803_8_54	-	6A
Helicobacter pylori SA301C	1345548	PRJEB4132	216015	Proteobacteria	delta/epsilon subdivisions	1.64146	39.1	-	CBNT01	102	1639	1415	9/21/13	3/24/17	Contig	MHH	SAMEA2272466	GCA_000475855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/855/GCA_000475855.1_SA301C	23898187	SA301C
Neisseria meningitidis	487	PRJNA384053	384053	Proteobacteria	Betaproteobacteria	2.16727	51.7	-	NGBE01	127	-	-	9/20/17	9/22/17	Contig	Harvard T.H. Chan School of Public Health	SAMN06827253	GCA_002318395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/395/GCA_002318395.1_ASM231839v1	28904187	NmJP14x2
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.81653	66	-	JTVE01	150	6577	6344	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105531	GCA_000794185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/185/GCA_000794185.1_AZPAE14830	25367914	AZPAE14830
Acinetobacter baumannii UH10107	1398948	PRJNA218749	218749	Proteobacteria	Gammaproteobacteria	4.0064	38.9	-	AYGN01	84	3922	3776	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597417	GCA_000515515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/515/GCA_000515515.1_gabuh10107_v01	24449752	UH10107
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.14833	35.4	-	LDAA01	33	2242	2071	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435106	GCA_001016175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/175/GCA_001016175.1_ASM101617v1	25946017	SH0396
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.20234	41.2	-	CZFE01	62	2238	2061	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595219	GCA_900012315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/315/GCA_900012315.1_assembly_GD-0018	-	-
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.33967	38.2	-	FJFP01	27	3050	2949	2/20/16	3/27/17	Contig	SC	SAMEA2080618	GCA_900062375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/375/GCA_900062375.1_10625_2_50	-	2532STDY5467523
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.37531	50.8	-	CXAT01	347	4649	4179	7/16/15	2/24/17	Scaffold	SC	SAMEA954740	GCA_001251395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/395/GCA_001251395.1_5008_7_4	-	Sh62542_401057
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.12614	68.2	-	LWYZ01	145	7399	6808	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208667	GCA_001978445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/445/GCA_001978445.1_ASM197844v1	-	NAU14A-4
Vibrio cholerae	666	PRJNA339415	339415	Proteobacteria	Gammaproteobacteria	3.94863	47.5	-	MIKJ01	157	3667	3524	9/15/16	4/10/17	Contig	Georgia Institute of Technology	SAMN05590404	GCA_001729155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/155/GCA_001729155.1_ASM172915v1	-	MZO-2
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.28037	29.2	-	MPFB01	419	3847	3690	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710934	GCA_002302205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/205/GCA_002302205.1_ASM230220v1	-	7464-Y/ST110
Vibrio parahaemolyticus	670	PRJNA242824	242824	Proteobacteria	Gammaproteobacteria	4.95241	45.4	-	JMMQ01	48	4794	4544	3/20/15	3/26/17	Contig	"University of Maryland, School of Medicine"	SAMN02712352	GCA_000958565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/565/GCA_000958565.1_SG176	25852665	SG176
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.91129	56.9	-	LEVA01	8	5992	5711	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280232	GCA_001030915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/915/GCA_001030915.1_Kleb_pneu_CHS89_V1	-	CHS89
Enterococcus faecalis	1351	PRJNA257021	257021	Terrabacteria group	Firmicutes	2.97906	37.4	-	JPTZ01	40	3099	2933	10/3/14	3/24/17	Contig	"The Affiliated Shenzhen Nanshan Hospital of Guangdong Medical College, Shenzhen, China;"	SAMN02950891	GCA_000763435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/435/GCA_000763435.1_ASM76343v1	-	MA2
Neisseria gonorrhoeae MU_NG17	1351808	PRJNA209641	209641	Proteobacteria	Betaproteobacteria	2.0857	52.6	-	ATRF01	320	2345	2103	6/10/15	4/11/17	Scaffold	"Read Laboratory, Emory University"	SAMN02338833	GCA_001026565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/565/GCA_001026565.1_ASM102656v1	-	MU_NG17
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	2.99116	38.1	-	LNLF01	263	3166	2865	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270925	GCA_001545845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/845/GCA_001545845.1_ASM154584v1	-	VRE-1300518
Bordetella pertussis	520	PRJNA394744	394744	Proteobacteria	Betaproteobacteria	3.83989	67.9	-	NXFF01	301	3793	3389	10/1/17	10/1/17	Contig	Universidad Autonoma de Nuevo Leon	SAMN07362434	GCA_002406825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/406/825/GCA_002406825.1_ASM240682v1	-	620-12
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.72054	31.3	-	FBLP01	34	1767	1644	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683367	GCA_001491015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/015/GCA_001491015.1_SWAN269	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.05126	54.8	-	FKBD01	52	4949	4709	4/6/16	3/28/17	Scaffold	SC	SAMEA2273426	GCA_900076295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/295/GCA_900076295.1_12082_4_54	-	e1947
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23267	64	-	FSGT01	22	5269	5156	12/14/16	4/2/17	Contig	SC	SAMEA2070167	GCA_900135365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/365/GCA_900135365.1_10625_4_50	-	50
Pseudomonas sp. R40(2017)	1981682	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.27063	60.3	-	NEHL01	24	5771	5622	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771392	GCA_002113365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/365/GCA_002113365.1_ASM211336v1	-	R40(2017)
Streptomyces sp. EN27	211464	PRJNA338713	338713	Terrabacteria group	Actinobacteria	7.55024	71.6	-	MJAG01	162	6859	6350	9/25/16	3/13/17	Scaffold	"i3S, University of Porto"	SAMN05567316	GCA_001746315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/315/GCA_001746315.1_ASM174631v1	-	EN27
Streptomyces sp. LUP30	1890285	PRJNA341317	341317	Terrabacteria group	Actinobacteria	9.18413	71.6	-	MJAJ01	132	8251	7600	9/25/16	3/13/17	Scaffold	"i3S, University of Porto"	SAMN05717681	GCA_001746365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/365/GCA_001746365.1_ASM174636v1	-	LUP30
Pseudomonas sp. R37(2017)	1981685	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.0364	60.1	-	NEHO01	52	5516	5349	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771389	GCA_002113375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/375/GCA_002113375.1_ASM211337v1	-	R37(2017)
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18074	64	-	FSGU01	25	5193	5072	12/14/16	3/21/17	Contig	SC	SAMEA2070697	GCA_900135375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/375/GCA_900135375.1_10625_4_54	-	54
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.96824	54.8	-	FKBG01	50	4908	4676	4/6/16	3/28/17	Scaffold	SC	SAMEA2273430	GCA_900076305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/305/GCA_900076305.1_12045_5_7	-	e1985
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.59001	31.7	-	FBFX01	19	1599	1528	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683217	GCA_001491035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/035/GCA_001491035.1_D13A4	-	n/a
Bordetella pertussis	520	PRJNA394744	394744	Proteobacteria	Betaproteobacteria	3.86847	67.8	-	NXFC01	297	3913	3544	10/1/17	10/1/17	Contig	Universidad Autonoma de Nuevo Leon	SAMN07362435	GCA_002406835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/406/835/GCA_002406835.1_ASM240683v1	-	781-14
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.15164	37.7	-	LNMA01	177	3320	2976	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270946	GCA_001545855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/855/GCA_001545855.1_ASM154585v1	-	VRE-1402237
Neisseria gonorrhoeae MU_NG19	1351810	PRJNA209647	209647	Proteobacteria	Betaproteobacteria	2.04712	52.6	-	ATRH01	323	2319	2067	6/10/15	4/11/17	Scaffold	"Read Laboratory, Emory University"	SAMN02338835	GCA_001026625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/625/GCA_001026625.1_ASM102662v1	-	MU_NG19
Enterococcus faecalis	1351	PRJNA246627	246627	Terrabacteria group	Firmicutes	2.94666	37.3	-	JQHD01	81	3004	2891	10/6/14	3/24/17	Contig	Universiti of Malaya	SAMN02996613	GCA_000763645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/645/GCA_000763645.1_ASM76364v1	-	C10B
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.81476	57	-	LEVB01	9	5897	5621	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280233	GCA_001030935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/935/GCA_001030935.1_Kleb_pneu_CHS90_V1	-	CHS90
Vibrio parahaemolyticus	670	PRJNA242822	242822	Proteobacteria	Gammaproteobacteria	5.17797	45.3	-	JMMO01	65	4990	4598	3/20/15	3/25/17	Contig	"University of Maryland, School of Medicine"	SAMN02712350	GCA_000958575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/575/GCA_000958575.1_K1461	25852665	K1461
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.041	28.6	-	MPFC01	387	3689	3521	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710935	GCA_002302225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/225/GCA_002302225.1_ASM230222v1	-	7465-DH/ST42
Vibrio cholerae 2740-80	412614	PRJNA339415	339415	Proteobacteria	Gammaproteobacteria	3.98685	47.7	-	MIKI01	191	3804	3661	9/15/16	3/28/17	Contig	Georgia Institute of Technology	SAMN05590403	GCA_001729185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/185/GCA_001729185.1_ASM172918v1	-	2740-80
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.15796	68.2	-	LWZA01	97	7417	6840	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208668	GCA_001978455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/455/GCA_001978455.1_ASM197845v1	-	NAU14A-5
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.70417	50.8	-	CXHI01	370	5168	4535	7/16/15	2/24/17	Scaffold	SC	SAMEA2004799	GCA_001251455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/455/GCA_001251455.1_8289_7_38	-	75645
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.33976	38.3	-	FJFQ01	22	3064	2959	2/20/16	3/28/17	Contig	SC	SAMEA2077739	GCA_900062385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/385/GCA_900062385.1_10625_2_51	-	2532STDY5467524
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.17418	41.4	-	CZEF01	20	2113	2007	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595201	GCA_900012395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/395/GCA_900012395.1_assembly_9401240	-	-
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.13967	35.4	-	LDAC01	34	2207	2053	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435108	GCA_001016195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/195/GCA_001016195.1_ASM101619v1	25946017	SH0655
Acinetobacter baumannii UH10707	1398949	PRJNA218750	218750	Proteobacteria	Gammaproteobacteria	4.00442	39.1	-	AYGM01	166	3913	3722	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597423	GCA_000515535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/535/GCA_000515535.1_gabuh10707_v01	24449752	UH10707
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.99554	66.1	-	JTVF01	115	6768	6532	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105530	GCA_000794195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/195/GCA_000794195.1_AZPAE14829	25367914	AZPAE14829
Neisseria meningitidis	487	PRJNA384053	384053	Proteobacteria	Betaproteobacteria	2.11433	51.8	-	NGBF01	125	-	-	9/20/17	9/22/17	Contig	Harvard T.H. Chan School of Public Health	SAMN06827252	GCA_002318415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/415/GCA_002318415.1_ASM231841v1	28904187	NmJP14x1
Helicobacter pylori SA194C	1345589	PRJEB4100	216058	Proteobacteria	delta/epsilon subdivisions	1.56657	38.7	-	CBNK01	54	1537	1367	9/21/13	3/24/17	Contig	MHH	SAMEA2272059	GCA_000475895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/895/GCA_000475895.1_SA194C	23898187	SA194C
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.07169	39.5	-	CMHO01	48	2272	2039	3/23/15	3/11/17	Contig	SC	SAMEA1029195	GCA_001088705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/705/GCA_001088705.1_7038_6_19	-	SMRU2995
Buchnera aphidicola (Aphis glycines)	1265350	PRJNA256101	256101	Proteobacteria	Gammaproteobacteria	0.638851	25.6387	chromosome:NZ_CP009253.1/CP009253.1; plasmid pLeu:NZ_CP009254.1/CP009254.1; plasmid pTrp:NZ_CP009255.1/CP009255.1	-	3	618	561	9/8/15	4/10/17	Complete Genome	The Ohio State University	SAMN02937542	GCA_001280225.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/225/GCA_001280225.1_ASM128022v1	26516375	BAg
Mycobacterium tuberculosis TKK_03_0160	1448461	PRJNA235466	235466	Terrabacteria group	Actinobacteria	4.40786	65.5	-	JJYE01	5	4293	4100	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585956	GCA_000652375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/375/GCA_000652375.1_Myco_tube_TKK_03_0160_V1	-	TKK_03_0160
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.53981	31.9	-	JUMU01	98	2499	2402	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198158	GCA_001075955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/955/GCA_001075955.1_ASM107595v1	26230489	939_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.14125	35.3	-	NHUD01	66	5534	5235	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163324	GCA_002199405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/405/GCA_002199405.1_ASM219940v1	-	MOD1_Bc62
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	2.88754	37.9	-	JPBJ01	19	2902	2816	7/15/14	2/26/17	Contig	Cornell University	SAMN02741596	GCA_000728615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/615/GCA_000728615.1_ASM72861v1	-	FSL R8-7399
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.71547	30.3	-	CUOT01	12	1808	1680	3/31/15	3/18/17	Contig	SC	SAMEA1010407	GCA_001230725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/725/GCA_001230725.1_7065_7_91	-	OXC6440
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20093977	1412510	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007309.2/CP007309.2	-	1	4707	4448	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384231	GCA_000623995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/623/995/GCA_000623995.2_ASM62399v2	24786953	SA20093977
Staphylococcus aureus M1223	1169268	PRJNA158785	158785	Terrabacteria group	Firmicutes	2.95297	33	-	AOBA01	4	3103	2937	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00839753	GCA_000363025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/025/GCA_000363025.1_Stap_aure_M1223_V1	-	M1223
Staphylococcus aureus M1224	1169269	PRJNA158787	158787	Terrabacteria group	Firmicutes	2.87609	32.9	-	AOBB01	10	3012	2842	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00839754	GCA_000363045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/045/GCA_000363045.1_Stap_aure_M1224_V1	-	M1224
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20094079	1412524	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007310.2/CP007310.2	-	1	4711	4450	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384245	GCA_000624015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/015/GCA_000624015.2_ASM62401v2	24786953	SA20094079
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.74618	30.3	-	CUJF01	22	1862	1730	3/31/15	3/18/17	Contig	SC	SAMEA1010648	GCA_001230905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/905/GCA_001230905.1_7038_3_48	-	OXC6298
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.05883	37.8	-	JPBH01	33	3122	3030	7/15/14	2/26/17	Contig	Cornell University	SAMN02741594	GCA_000728645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/645/GCA_000728645.1_ASM72864v1	-	FSL R8-7381
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.19063	35.3	-	NHUG01	63	5581	5292	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163321	GCA_002199445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/445/GCA_002199445.1_ASM219944v1	-	MOD1_Bc65
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.70764	31.8	-	JULL01	123	2715	2607	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198193	GCA_001076005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/005/GCA_001076005.1_ASM107600v1	26230489	973_SEPI
Mycobacterium tuberculosis TKK_04_0051	1448462	PRJNA235467	235467	Terrabacteria group	Actinobacteria	4.40849	65.6	-	JJYD01	2	4277	4109	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585957	GCA_000652395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/395/GCA_000652395.1_Myco_tube_TKK_04_0051_V1	-	TKK_04_0051
Spiroplasma citri	2133	PRJNA296877	296877	Terrabacteria group	Tenericutes	1.64088	25.5462	chromosome:NZ_CP013197.1/CP013197.1; plasmid pSCI15:NZ_CP013199.1/CP013199.1; plasmid pSCI26:NZ_CP013198.1/CP013198.1	-	3	1900	1589	11/28/16	4/17/17	Complete Genome	Beltsville Agricultural Research Center	SAMN04110376	GCA_001886855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/855/GCA_001886855.1_ASM188685v1	-	R8-A2
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05069	39.6	-	CNXZ02	170	2239	2034	3/22/15	3/11/17	Contig	SC	SAMEA1463221	GCA_001088725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/725/GCA_001088725.2_7553_4_16	-	ND6135
Helicobacter pylori SA155C	1345553	PRJEB4064	216022	Proteobacteria	delta/epsilon subdivisions	1.66459	38.4	-	CBOH01	57	1623	1446	9/21/13	3/24/17	Contig	MHH	SAMEA2272366	GCA_000475915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/915/GCA_000475915.1_SA155C	23898187	SA155C
Neisseria meningitidis	487	PRJNA384053	384053	Proteobacteria	Betaproteobacteria	2.09449	52	-	NGBG01	87	-	-	9/20/17	9/22/17	Contig	Harvard T.H. Chan School of Public Health	SAMN06827251	GCA_002318455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/455/GCA_002318455.1_ASM231845v1	28904187	NmJP12x3
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.79209	66	-	JTVA01	149	6611	6365	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105535	GCA_000794245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/245/GCA_000794245.1_AZPAE14834	25367914	AZPAE14834
Acinetobacter baumannii UH11608	1398950	PRJNA218751	218751	Proteobacteria	Gammaproteobacteria	3.88647	38.9	-	AYGL01	80	3755	3620	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597416	GCA_000515555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/555/GCA_000515555.1_gabuh11608_v01	24449752	UH11608
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.14486	35.4	-	LDAB01	33	2241	2062	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435107	GCA_001016205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/205/GCA_001016205.1_ASM101620v1	25946017	SH0519
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.03625	41.2	-	CZGU01	34	2052	1941	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595259	GCA_900012665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/665/GCA_900012665.1_assembly_GD-0107	-	-
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.4138	38.3	-	FJFT01	24	3122	3014	2/20/16	3/27/17	Contig	SC	SAMEA2077741	GCA_900062395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/395/GCA_900062395.1_10625_2_57	-	2532STDY5467530
Shigella sonnei	624	PRJEB2075	203826	Proteobacteria	Gammaproteobacteria	4.88093	50.4	-	CXME01	480	5569	4712	7/16/15	2/24/17	Scaffold	SC	SAMEA1559977	GCA_001251515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/515/GCA_001251515.1_8489_2_83	-	90931857
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.12349	68.2	-	LWZC01	122	7395	6807	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208670	GCA_001978485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/485/GCA_001978485.1_ASM197848v1	-	NAU14A-10
Vibrio cholerae	666	PRJNA339415	339415	Proteobacteria	Gammaproteobacteria	4.02214	47.5	-	MIKK01	113	3790	3609	9/15/16	3/28/17	Contig	Georgia Institute of Technology	SAMN05590406	GCA_001729195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/195/GCA_001729195.1_ASM172919v1	-	VC22
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.07772	28.5	-	MPEK01	202	3676	3546	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710937	GCA_002302245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/245/GCA_002302245.1_ASM230224v1	-	7467-DH/ST42
Vibrio parahaemolyticus	670	PRJNA242823	242823	Proteobacteria	Gammaproteobacteria	5.11431	45.4	-	JMMP01	63	4920	4647	3/20/15	3/25/17	Contig	"University of Maryland, School of Medicine"	SAMN02712351	GCA_000958585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/585/GCA_000958585.1_K1275	25852665	K1275
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.58501	57.2	-	LEVC01	4	5667	5441	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280234	GCA_001030945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/945/GCA_001030945.1_Kleb_pneu_CHS91_V1	-	CHS91
Enterococcus faecalis	1351	PRJNA264825	264825	Terrabacteria group	Firmicutes	3.23297	37.3	-	JSES01	70	3419	3269	11/5/14	3/24/17	Contig	NCTR/US FDA	SAMN03142838	GCA_000772515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/515/GCA_000772515.1_ASM77251v1	26679597	ATCC 51299
Neisseria gonorrhoeae MU_NG25	1351815	PRJNA209655	209655	Proteobacteria	Betaproteobacteria	2.11975	52.5	-	ATRL01	323	2452	2092	6/10/15	8/28/17	Scaffold	"Read Laboratory, Emory University"	SAMN02338840	GCA_001026645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/645/GCA_001026645.1_ASM102664v1	-	MU_NG25
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.06343	38	-	LNMB01	361	3286	2907	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270947	GCA_001545895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/895/GCA_001545895.1_ASM154589v1	-	VRE-1402253
Bordetella pertussis	520	PRJNA394744	394744	Proteobacteria	Betaproteobacteria	3.88412	67.8	-	NXFE01	317	3929	3547	10/1/17	10/1/17	Contig	Universidad Autonoma de Nuevo Leon	SAMN07362433	GCA_002406865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/406/865/GCA_002406865.1_ASM240686v1	-	601-9
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.81095	31.2	-	FBOB01	32	1909	1813	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683437	GCA_001491055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/055/GCA_001491055.1_H103600372	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.11224	55.3	-	FKBE01	55	5051	4821	4/6/16	3/28/17	Scaffold	SC	SAMEA2273428	GCA_900076315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/315/GCA_900076315.1_12045_5_5	-	e1963
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18215	64	-	FSGW01	30	5191	5073	12/14/16	3/21/17	Contig	SC	SAMEA2070286	GCA_900135395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/395/GCA_900135395.1_10625_4_56	-	56
Pseudomonas sp. R34(2017)	1981688	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.41732	60.6	-	NEHR01	27	5885	5736	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771386	GCA_002113425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/425/GCA_002113425.1_ASM211342v1	-	R34(2017)
Streptomyces sp. TP-A0874	549819	PRJDB4099	340142	Terrabacteria group	Actinobacteria	5.09781	71.4	-	BBZK01	18	4406	4180	8/24/16	3/13/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00035866	GCA_001748085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/085/GCA_001748085.1_ASM174808v1	-	TP-A0874
Streptomyces sp. SPMA113	913267	PRJDB4859	339426	Terrabacteria group	Actinobacteria	11.5961	71.1	-	BDFA01	70	9414	8852	8/17/16	3/14/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00052840	GCA_001748165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/165/GCA_001748165.1_ASM174816v1	-	SPMA113
Pseudomonas sp. R27(2017)	1981694	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.21752	64.8	-	NEHX01	58	5583	5425	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771380	GCA_002113445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/445/GCA_002113445.1_ASM211344v1	-	R27(2017)
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.00243	64.1	-	FVKZ01	15	5025	4860	3/10/17	3/18/17	Contig	SC	SAMEA2071193	GCA_900135425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/425/GCA_900135425.1_10625_4_58	-	58
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.00607	54.6	-	FKBF01	54	5000	4729	4/6/16	3/28/17	Scaffold	SC	SAMEA2273429	GCA_900076325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/325/GCA_900076325.1_12045_5_6	-	e1983
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65961	31.4	-	FBDG01	22	1716	1630	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683146	GCA_001491095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/095/GCA_001491095.1_EC4768	-	n/a
Bordetella pertussis	520	PRJNA394744	394744	Proteobacteria	Betaproteobacteria	3.86897	67.8	-	NXFD01	341	3942	3574	10/1/17	10/1/17	Contig	Universidad Autonoma de Nuevo Leon	SAMN07362432	GCA_002406875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/406/875/GCA_002406875.1_ASM240687v1	-	224-8
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.18266	37.7	-	LNLH01	153	3399	3026	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270927	GCA_001545955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/955/GCA_001545955.1_ASM154595v1	-	VRE-1300899
Neisseria gonorrhoeae MU_NG20	1351811	PRJNA209648	209648	Proteobacteria	Betaproteobacteria	2.01863	52.7	-	ATRI01	439	2298	2008	6/10/15	4/11/17	Scaffold	"Read Laboratory, Emory University"	SAMN02338836	GCA_001026655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/655/GCA_001026655.1_ASM102665v1	-	MU_NG20
Enterococcus faecalis EnGen0310 = MMH594	1158653	PRJNA185983	185983	Terrabacteria group	Firmicutes	3.26068	37	-	AOPW01	104	3447	3301	4/3/15	3/27/17	Contig	UMB	SAMN03457011	GCA_000968735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/735/GCA_000968735.2_ASM96873v2	25776747	MMH594
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.87052	56.9	-	LEVD01	5	5975	5684	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280235	GCA_001030985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/985/GCA_001030985.1_Kleb_pneu_CHS92_V1	-	CHS92
Vibrio parahaemolyticus	670	PRJNA242826	242826	Proteobacteria	Gammaproteobacteria	5.17626	45.3	-	JMMS01	111	4926	4573	3/20/15	3/25/17	Contig	"University of Maryland, School of Medicine"	SAMN02712354	GCA_000958595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/595/GCA_000958595.1_AF91	25852665	AF91
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.00851	28.7	-	MPFZ01	634	3707	3478	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710914	GCA_002302265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/265/GCA_002302265.1_ASM230226v1	-	6631-DH/ST42
Vibrio cholerae	666	PRJNA339415	339415	Proteobacteria	Gammaproteobacteria	4.01792	47.6	-	MIZG01	160	3828	3650	9/24/16	3/28/17	Contig	Georgia Institute of Technology	SAMN05590420	GCA_001743085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/743/085/GCA_001743085.1_ASM174308v1	-	3223-74
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.12882	68.2	-	LWZB01	174	7407	6793	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208669	GCA_001978505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/505/GCA_001978505.1_ASM197850v1	-	NAU14A-8
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.67687	50.7	-	CXKE01	376	5223	4486	7/17/15	2/24/17	Scaffold	SC	SAMEA2004867	GCA_001251535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/535/GCA_001251535.1_8290_4_38	-	99383
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.43177	38.3	-	FJGW01	27	3130	3019	2/20/16	3/27/17	Contig	SC	SAMEA2078025	GCA_900062415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/415/GCA_900062415.1_10625_3_55	-	2532STDY5467624
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	1.99361	41.3	-	CZET01	42	2020	1896	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595191	GCA_900013145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/145/GCA_900013145.1_assembly_2000343	-	-
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.12013	35.1	-	LDAG01	25	2192	2068	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435112	GCA_001016215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/215/GCA_001016215.1_ASM101621v1	25946017	SH0702
Acinetobacter baumannii UH12208	1398951	PRJNA218752	218752	Proteobacteria	Gammaproteobacteria	4.13917	38.9	-	AYGK01	215	4003	3800	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597415	GCA_000515575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/575/GCA_000515575.1_gabuh12208_v01	24449752	UH12208
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.87669	66	-	JTVB01	148	6699	6468	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105534	GCA_000794265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/265/GCA_000794265.1_AZPAE14833	25367914	AZPAE14833
Neisseria meningitidis	487	PRJNA384053	384053	Proteobacteria	Betaproteobacteria	2.12188	51.8	-	NGBH01	143	-	-	9/20/17	9/22/17	Contig	Harvard T.H. Chan School of Public Health	SAMN06827250	GCA_002318465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/465/GCA_002318465.1_ASM231846v1	28904187	NmJP12x2
Helicobacter pylori SA215C	1345596	PRJEB4107	216063	Proteobacteria	delta/epsilon subdivisions	1.66514	39	-	CBNO01	68	1623	1449	9/21/13	3/24/17	Contig	MHH	SAMEA2271976	GCA_000475935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/935/GCA_000475935.1_SA215C	23898187	SA215C
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08526	39.5	-	COBB02	217	2232	2015	3/22/15	3/5/17	Contig	SC	SAMEA1463262	GCA_001088745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/745/GCA_001088745.2_7622_2_3	-	BR1008
Ureaplasma parvum	134821	PRJNA390580	390580	Terrabacteria group	Tenericutes	0.727176	25.5	chromosome:NZ_CP021991.1/CP021991.1	-	1	622	546	6/22/17	6/24/17	Complete Genome	HeBei North University	SAMN07246861	GCA_002205735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/735/GCA_002205735.1_ASM220573v1	-	hebnu uu3
Mycobacterium tuberculosis TKK_04_0054	1448463	PRJNA235468	235468	Terrabacteria group	Actinobacteria	4.40981	65.5	-	JJYC01	5	4292	4100	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585958	GCA_000652415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/415/GCA_000652415.1_Myco_tube_TKK_04_0054_V1	-	TKK_04_0054
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.48378	31.9	-	JVTV01	122	2434	2345	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197300	GCA_001076185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/185/GCA_001076185.1_ASM107618v1	26230489	1321_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	4.93973	35.5	-	NHUH01	83	5377	5043	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163320	GCA_002199465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/465/GCA_002199465.1_ASM219946v1	-	MOD1_Bc177
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09547	37.9	-	JPBS01	20	3148	3042	7/15/14	2/26/17	Contig	Cornell University	SAMN02741605	GCA_000728665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/665/GCA_000728665.1_ASM72866v1	-	FSL R8-7554
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.68434	30.5	-	CUVY01	12	1773	1678	3/31/15	3/18/17	Contig	SC	SAMEA1401313	GCA_001230945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/945/GCA_001230945.1_7213_3_93	-	OXC6638
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20094350	1412504	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007311.2/CP007311.2	-	1	4719	4453	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384225	GCA_000624035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/035/GCA_000624035.2_ASM62403v2	24786953	SA20094350
Staphylococcus aureus M1229	1158478	PRJNA88759	88759	Terrabacteria group	Firmicutes	2.84136	32.9	-	AIYX01	4	2981	2832	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809070	GCA_000363065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/065/GCA_000363065.1_Stap_aure_M1229_V1	-	M1229
Staphylococcus aureus M1244	1169270	PRJNA158789	158789	Terrabacteria group	Firmicutes	2.95962	33	-	AOBC01	13	3115	2934	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00839755	GCA_000363085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/085/GCA_000363085.1_Stap_aure_M1244_V1	-	M1244
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20094383	1412516	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007313.2/CP007313.2	-	1	4712	4448	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384237	GCA_000624075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/075/GCA_000624075.2_ASM62407v2	24786953	SA20094383
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.68848	30.3	-	CUUA01	15	1766	1648	3/31/15	3/18/17	Contig	SC	SAMEA1401735	GCA_001231005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/005/GCA_001231005.1_7213_3_42	-	OXC6585
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.06383	37.9	-	JPBQ01	24	3107	3011	7/15/14	2/26/17	Contig	Cornell University	SAMN02741603	GCA_000728675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/675/GCA_000728675.1_ASM72867v1	-	FSL R8-7493
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.20169	35.3	-	NHUM01	44	5615	5303	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163293	GCA_002199475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/475/GCA_002199475.1_ASM219947v1	-	MOD1_Bc182
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.53078	31.8	-	JVTC01	114	2500	2400	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197318	GCA_001076235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/235/GCA_001076235.1_ASM107623v1	26230489	1337_SEPI
Mycobacterium tuberculosis TKK_04_0059	1448464	PRJNA235469	235469	Terrabacteria group	Actinobacteria	4.40149	65.6	-	JJYB01	1	4276	4115	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585959	GCA_000652435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/435/GCA_000652435.1_Myco_tube_TKK_04_0059_V1	-	TKK_04_0059
Buchnera aphidicola (Diuraphis noxia)	118101	PRJNA297165	297165	Proteobacteria	Gammaproteobacteria	0.636266	25.5	chromosome:NZ_CP013259.1/CP013259.1	-	1	615	562	8/9/16	4/10/17	Complete Genome	University of Stellenbosch	SAMN04288104	GCA_001700895.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/895/GCA_001700895.1_ASM170089v1	-	-
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.12175	39.7	-	CKCC01	46	2366	2111	3/21/15	3/11/17	Contig	SC	SAMEA1023834	GCA_001088885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/885/GCA_001088885.1_6593_4_16	-	33B
Helicobacter pylori SA169C	1345576	PRJEB4087	216044	Proteobacteria	delta/epsilon subdivisions	1.66161	38.4	-	CBOK01	55	1623	1420	9/21/13	3/24/17	Contig	MHH	SAMEA2272464	GCA_000475955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/955/GCA_000475955.1_SA169C	23898187	SA169C
Neisseria meningitidis	487	PRJNA384053	384053	Proteobacteria	Betaproteobacteria	2.14075	51.7	-	NGBI01	108	-	-	9/20/17	9/22/17	Contig	Harvard T.H. Chan School of Public Health	SAMN06827249	GCA_002318475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/475/GCA_002318475.1_ASM231847v1	28904187	NmJP12x1
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.50009	66.2	-	JTUZ01	181	6222	5983	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105536	GCA_000794285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/285/GCA_000794285.1_AZPAE14835	25367914	AZPAE14835
Acinetobacter baumannii UH12308	1398952	PRJNA218753	218753	Proteobacteria	Gammaproteobacteria	3.96593	39	-	AYGJ01	110	3823	3691	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597414	GCA_000515595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/595/GCA_000515595.1_gabuh12308_v01	24449752	UH12308
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	1.97069	35.2	-	LDAI01	18	2012	1888	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435114	GCA_001016255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/255/GCA_001016255.1_ASM101625v1	25946017	SH1287
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.04858	41.2	-	CZEQ01	37	2059	1945	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595200	GCA_900013295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/295/GCA_900013295.1_assembly_2071319	-	-
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.38058	38.3	-	FJGZ01	20	3091	2985	2/20/16	3/27/17	Contig	SC	SAMEA2077494	GCA_900062425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/425/GCA_900062425.1_10625_2_30	-	2532STDY5467503
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.6778	50.8	-	CXHP01	380	5283	4498	7/17/15	2/24/17	Scaffold	SC	SAMEA2003374	GCA_001251555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/555/GCA_001251555.1_8289_7_45	-	75684
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.1292	68.2	-	LWZD01	125	7388	6811	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208671	GCA_001978515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/515/GCA_001978515.1_ASM197851v1	-	NAU14B-1
Vibrio cholerae	666	PRJNA339415	339415	Proteobacteria	Gammaproteobacteria	3.98259	47.6	-	MIOW01	148	3808	3672	10/14/16	3/28/17	Contig	Georgia Institute of Technology	SAMN05590410	GCA_001857145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/145/GCA_001857145.1_ASM185714v1	-	2559-78
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.12881	28.9	-	MPEM01	88	3808	3671	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710915	GCA_002302285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/285/GCA_002302285.1_ASM230228v1	-	6632-NonSp/ST3
Vibrio parahaemolyticus	670	PRJNA242827	242827	Proteobacteria	Gammaproteobacteria	4.95522	45.5	-	JMMT01	43	4729	4532	3/20/15	3/25/17	Contig	"University of Maryland, School of Medicine"	SAMN02712355	GCA_000958645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/645/GCA_000958645.1_22702	25852665	22702
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.58943	57.3	-	LEVE01	17	5671	5399	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280236	GCA_001030995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/995/GCA_001030995.1_Kleb_pneu_CHS93_V1	-	CHS93
Enterococcus faecalis JH2-2	1320322	PRJEB1789	275528	Terrabacteria group	Firmicutes	2.86463	37.6	-	CAWH01	172	2915	2653	2/15/15	3/26/17	Contig	INRA	SAMEA3158451	GCA_000982595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/595/GCA_000982595.1_JH2	-	JH2-2
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.15041	52.4	-	CQLK01	69	2527	2195	3/23/15	4/11/17	Scaffold	SC	SAMEA1677487	GCA_001084685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/685/GCA_001084685.1_8727_5_51	-	GCGS201
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	2.18921	38.6	-	LNLA01	138	2270	2117	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270920	GCA_001545985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/985/GCA_001545985.1_ASM154598v1	-	197806558
Bordetella pertussis	520	PRJNA287630	287630	Proteobacteria	Betaproteobacteria	3.87667	67.8	-	LFUE01	299	3729	3361	7/24/15	3/26/17	Scaffold	Istituto Superiore di Sanita'	SAMN03784877	GCA_001187405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/405/GCA_001187405.1_ASM118740v1	26358588	BpC90
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.69074	31.4	-	FBQG01	35	1750	1668	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683488	GCA_001491135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/135/GCA_001491135.1_H120960536	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.05657	54.8	-	FKBC01	47	4968	4719	4/6/16	3/28/17	Scaffold	SC	SAMEA2273427	GCA_900076335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/335/GCA_900076335.1_12082_4_55	-	e1948
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.00276	64.1	-	FVKY01	16	5025	4858	3/10/17	3/18/17	Contig	SC	SAMEA2070699	GCA_900135445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/445/GCA_900135445.1_10625_4_60	-	60
Pseudomonas sp. R24(2017)	1981697	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.31001	60.5	-	NEIA01	37	5734	5577	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771377	GCA_002113465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/465/GCA_002113465.1_ASM211346v1	-	R24(2017)
Streptomyces sp. CC53	1906740	PRJNA345369	345369	Terrabacteria group	Actinobacteria	6.97889	73.3	-	MKXB01	240	6374	5882	11/2/16	3/14/17	Scaffold	CINVESTAV-Langebio	SAMN05861226	GCA_001865245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/245/GCA_001865245.1_ASM186524v1	-	CC53
Streptomyces sp. NBRC 110465	1897621	PRJDB5149	342140	Terrabacteria group	Actinobacteria	7.62584	72.1	-	BDHJ01	35	6739	6416	11/1/16	5/13/17	Scaffold	National Institute of Technology and Evaluation Biological Resource Center	SAMD00059478	GCA_001895105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/105/GCA_001895105.1_ASM189510v1	-	NBRC 110465
Pseudomonas sp. R19(2017)	1981702	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.21945	64.8	-	NEIF01	63	5591	5428	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771372	GCA_002113485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/485/GCA_002113485.1_ASM211348v1	-	R19(2017)
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.17552	64.1	-	FSGZ01	21	5212	5106	12/14/16	3/21/17	Contig	SC	SAMEA2070700	GCA_900135455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/455/GCA_900135455.1_10625_4_63	-	63
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.91735	55.4	-	FKBH01	34	4799	4589	4/6/16	3/28/17	Scaffold	SC	SAMEA2273431	GCA_900076345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/345/GCA_900076345.1_12045_5_9	-	e2005
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.73414	31.3	-	FBMJ01	33	1805	1707	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683387	GCA_001491155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/155/GCA_001491155.1_CCN182	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.7102	67.4	-	CSRZ01	712	3730	2949	3/23/15	3/26/17	Scaffold	SC	SAMEA1931747	GCA_001191795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/795/GCA_001191795.1_5463_3_9	-	B184
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	2.89315	38	-	LNLB01	167	3009	2829	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270921	GCA_001546995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/995/GCA_001546995.1_ASM154699v1	-	E13931
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.09535	52.6	-	CQJM01	64	2455	2129	3/23/15	4/11/17	Scaffold	SC	SAMEA1677412	GCA_001085725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/725/GCA_001085725.1_8727_5_52	-	GCGS202
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.05351	36.9	-	JWBU01	152	3084	2945	7/10/15	3/26/17	Contig	University of Washington	SAMN03197092	GCA_001052215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/215/GCA_001052215.1_ASM105221v1	26230489	1138_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.85042	57	-	LEVF01	10	5960	5677	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280237	GCA_001031015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/015/GCA_001031015.1_Kleb_pneu_CHS94_V1	-	CHS94
Vibrio parahaemolyticus	670	PRJNA242825	242825	Proteobacteria	Gammaproteobacteria	5.15045	45.5	-	JMMR01	91	5015	4644	3/20/15	3/25/17	Contig	"University of Maryland, School of Medicine"	SAMN02712353	GCA_000958655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/655/GCA_000958655.1_J_C2_34	25852665	J-C2-34
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.06961	28.5	-	MPEN01	116	3695	3564	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710916	GCA_002302305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/305/GCA_002302305.1_ASM230230v1	-	6633-DH/ST42
Vibrio cholerae	666	PRJNA339415	339415	Proteobacteria	Gammaproteobacteria	4.21796	47.2	-	MIOU01	247	4035	3783	10/14/16	3/28/17	Contig	Georgia Institute of Technology	SAMN05590408	GCA_001857155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/155/GCA_001857155.1_ASM185715v1	-	VC53
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.12252	68.2	-	LWZE01	138	7381	6806	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208672	GCA_001978525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/525/GCA_001978525.1_ASM197852v1	-	NAU14B-2
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.66867	50.8	-	CXIX01	376	5198	4494	7/16/15	2/24/17	Scaffold	SC	SAMEA1972461	GCA_001251575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/575/GCA_001251575.1_8289_7_84	-	86323
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.34194	38.3	-	FJHA01	20	3061	2960	2/20/16	3/27/17	Contig	SC	SAMEA2077531	GCA_900062435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/435/GCA_900062435.1_10625_2_31	-	2532STDY5467504
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.04762	41.2	-	CZGI01	32	2068	1950	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595256	GCA_900013305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/305/GCA_900013305.1_assembly_GD-0101	-	-
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.12047	35.3	-	LDAJ01	29	2189	2053	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435115	GCA_001016265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/265/GCA_001016265.1_ASM101626v1	25946017	SH1370
Acinetobacter baumannii UH12408	1398953	PRJNA218754	218754	Proteobacteria	Gammaproteobacteria	3.85607	39	-	AYGI01	94	3715	3574	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597413	GCA_000515615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/615/GCA_000515615.1_gabuh12408_v01	24449752	UH12408
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.43884	66.3	-	JTUY01	83	6132	5952	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105537	GCA_000794305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/305/GCA_000794305.1_AZPAE14836	25367914	AZPAE14836
Neisseria meningitidis	487	PRJNA384053	384053	Proteobacteria	Betaproteobacteria	2.12959	51.8	-	NGBJ01	130	-	-	9/20/17	9/22/17	Contig	Harvard T.H. Chan School of Public Health	SAMN06827248	GCA_002318495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/495/GCA_002318495.1_ASM231849v1	28904187	NmJP06x1
Helicobacter pylori SA214C	1345595	PRJEB4106	216068	Proteobacteria	delta/epsilon subdivisions	1.65264	39	-	CBNS01	70	1619	1429	9/21/13	3/24/17	Contig	MHH	SAMEA2271975	GCA_000475975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/975/GCA_000475975.1_SA214C	23898187	SA214C
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.99507	39.7	-	CNQR02	115	2161	1973	3/22/15	3/11/17	Contig	SC	SAMEA1032622	GCA_001088985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/985/GCA_001088985.2_6952_7_9	-	R34-3170
Ureaplasma parvum serovar 3	38504	PRJDB1737	245797	Terrabacteria group	Tenericutes	0.727289	25.5	chromosome:NZ_AP014584.1/AP014584.1	-	1	622	565	4/29/14	4/10/17	Complete Genome	GIRC	SAMD00000347	GCA_000828735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/735/GCA_000828735.1_ASM82873v1	24855292	SV3F4
Mycobacterium tuberculosis TKK_04_0060	1448465	PRJNA235470	235470	Terrabacteria group	Actinobacteria	4.39909	65.6	-	JJYA01	2	4279	4110	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585960	GCA_000652455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/455/GCA_000652455.1_Myco_tube_TKK_04_0060_V1	-	TKK_04_0060
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.43355	32	-	JVSZ01	84	2401	2289	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197321	GCA_001076265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/265/GCA_001076265.1_ASM107626v1	26230489	134_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.19229	35.3	-	NHUY01	57	5613	5303	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163268	GCA_002199505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/505/GCA_002199505.1_ASM219950v1	-	MOD1_Bc195
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.10204	37.8	-	JPBT01	25	3170	3076	7/15/14	2/26/17	Contig	Cornell University	SAMN02741606	GCA_000728685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/685/GCA_000728685.1_ASM72868v1	-	FSL R8-7559
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69139	30.4	-	CUVU01	25	1809	1697	3/31/15	3/18/17	Contig	SC	SAMEA1401558	GCA_001231045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/045/GCA_001231045.1_7213_3_89	-	OXC6634
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20094389	1412515	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007314.2/CP007314.2	-	1	4707	4447	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384236	GCA_000624095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/095/GCA_000624095.2_ASM62409v2	24786953	SA20094389
Staphylococcus aureus M1248	1158479	PRJNA88761	88761	Terrabacteria group	Firmicutes	2.85741	32.9	-	AIYY01	9	2995	2837	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809071	GCA_000363105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/105/GCA_000363105.1_Stap_aure_M1248_V1	-	M1248
Staphylococcus aureus M1253	1158480	PRJNA88763	88763	Terrabacteria group	Firmicutes	2.91083	32.9	-	AIYZ01	2	3028	2869	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809073	GCA_000363125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/125/GCA_000363125.1_Stap_aure_M1253_V1	-	M1253
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20094521	1412484	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007315.2/CP007315.2	-	1	4707	4448	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384205	GCA_000624115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/115/GCA_000624115.2_ASM62411v2	24786953	SA20094521
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70301	30.5	-	CUOA01	18	1808	1707	3/31/15	3/18/17	Contig	SC	SAMEA1010438	GCA_001231085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/085/GCA_001231085.1_7065_7_74	-	OXC6422
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.06424	37.9	-	JPBP01	20	3106	3012	7/15/14	2/26/17	Contig	Cornell University	SAMN02741602	GCA_000728725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/725/GCA_000728725.1_ASM72872v1	-	FSL R8-7489
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.19609	35.4	-	NHVB01	65	5596	5297	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163263	GCA_002199525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/525/GCA_002199525.1_ASM219952v1	-	MOD1_Bc200
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.5788	31.8	-	JVZN01	93	2519	2415	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197151	GCA_001076305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/305/GCA_001076305.1_ASM107630v1	26230489	1191_SEPI
Mycobacterium tuberculosis TKK_04_0061	1448466	PRJNA235471	235471	Terrabacteria group	Actinobacteria	4.42171	65.6	-	JJXZ01	3	4294	4118	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585961	GCA_000652475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/475/GCA_000652475.1_Myco_tube_TKK_04_0061_V1	-	TKK_04_0061
Spiroplasma diminutum CUAS-1	1276221	PRJNA184745	184745	Terrabacteria group	Tenericutes	0.945296	25.5	chromosome:NC_021833.1/CP005076.1	-	1	888	846	7/17/13	4/17/17	Complete Genome	Academia Sinica	SAMN02602967	GCA_000439455.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/455/GCA_000439455.1_ASM43945v1	23873917	CUAS-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12743	39.6	-	CODN02	176	2328	2097	3/23/15	3/11/17	Contig	SC	SAMEA1463107	GCA_001089105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/105/GCA_001089105.2_7622_4_16	-	LE4038
Helicobacter pylori SA37A	1345524	PRJEB4049	215920	Proteobacteria	delta/epsilon subdivisions	1.60049	38.9	-	CBOO01	46	1595	1443	9/21/13	3/24/17	Contig	MHH	SAMEA2272170	GCA_000476015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/015/GCA_000476015.1_SA37A	23898187	SA37A
Neisseria meningitidis	487	PRJNA384053	384053	Proteobacteria	Betaproteobacteria	2.15093	51.7	-	NGBK01	117	-	-	9/20/17	9/22/17	Contig	Harvard T.H. Chan School of Public Health	SAMN06827247	GCA_002318535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/535/GCA_002318535.1_ASM231853v1	28904187	NmJP05x3
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.44929	66.3	-	JTUX01	135	6165	5941	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105538	GCA_000794325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/325/GCA_000794325.1_AZPAE14837	25367914	AZPAE14837
Acinetobacter baumannii UH12808	1398954	PRJNA218755	218755	Proteobacteria	Gammaproteobacteria	3.87261	39	-	AYGH01	117	3748	3594	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597412	GCA_000515635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/635/GCA_000515635.1_gabuh12808_v01	24449752	UH12808
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	1.99366	35.3	-	LDAM01	33	2049	1895	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435118	GCA_001016285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/285/GCA_001016285.1_ASM101628v1	25946017	SH3115
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.27831	41.2	-	CZGV01	82	2324	2152	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595265	GCA_900013315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/315/GCA_900013315.1_assembly_GD-0117	-	-
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.42369	38.3	-	FJHB01	20	3135	3021	2/20/16	3/27/17	Contig	SC	SAMEA2080613	GCA_900062445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/445/GCA_900062445.1_10625_2_32	-	2532STDY5467505
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.8094	50.6	-	CWTX01	450	5576	4628	7/16/15	2/24/17	Scaffold	SC	SAMEA3345022	GCA_001251615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/615/GCA_001251615.1_H14128025901	-	25901ss_1
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.1325	68.2	-	LWZF01	142	7384	6814	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208673	GCA_001978565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/565/GCA_001978565.1_ASM197856v1	-	NAU14B-3
Vibrio cholerae	666	PRJNA339415	339415	Proteobacteria	Gammaproteobacteria	3.9318	47.6	-	MIOT01	152	3712	3525	10/14/16	3/28/17	Contig	Georgia Institute of Technology	SAMN05590407	GCA_001857165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/165/GCA_001857165.1_ASM185716v1	-	VC48
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.03646	28.4	-	MPEO01	170	3672	3537	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710917	GCA_002302465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/465/GCA_002302465.1_ASM230246v1	-	6634-DH/ST42
Vibrio parahaemolyticus	670	PRJNA275536	275536	Proteobacteria	Gammaproteobacteria	5.21679	45.2	-	JZAN01	85	5061	4823	3/23/15	3/25/17	Contig	Health Canada	SAMN03349602	GCA_000960565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/565/GCA_000960565.1_ASM96056v1	-	Jul-65
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.73926	56.9	-	LEVG01	14	5843	5558	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280238	GCA_001031025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/025/GCA_001031025.1_Kleb_pneu_CHS95_V1	-	CHS95
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.15503	37.1	-	JWAR01	97	3280	3112	7/10/15	3/26/17	Contig	University of Washington	SAMN03197121	GCA_001052315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/315/GCA_001052315.1_ASM105231v1	26230489	1164_EFLS
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.15181	52.4	-	CQME01	66	2533	2199	3/22/15	4/10/17	Scaffold	SC	SAMEA1677292	GCA_001087905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/905/GCA_001087905.1_8727_5_65	-	GCGS215
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.15313	37.8	-	LNMI01	168	3384	3003	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270954	GCA_001547015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/015/GCA_001547015.1_ASM154701v1	-	VRE-1402673
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.76971	67.8	-	CSMP01	716	3792	3172	3/22/15	3/26/17	Scaffold	SC	SAMEA751366	GCA_001192455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/455/GCA_001192455.1_5633_3_9	-	B201
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65996	31.4	-	FBAQ01	21	1725	1625	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683074	GCA_001491175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/175/GCA_001491175.1_EC3631	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.90081	55.4	-	FKBJ01	54	4829	4576	4/6/16	3/28/17	Scaffold	SC	SAMEA2273433	GCA_900076355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/355/GCA_900076355.1_12045_5_11	-	e2024
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.1737	64.1	-	FSHA01	14	5201	5101	12/14/16	3/21/17	Contig	SC	SAMEA1964620	GCA_900135465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/465/GCA_900135465.1_10625_4_64	-	64
Pseudomonas sp. R16(2017)	1981704	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.31872	64.7	-	NEIH01	55	5730	5579	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771370	GCA_002113495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/495/GCA_002113495.1_ASM211349v1	-	R16(2017)
Streptomyces sp. CB02923	1718985	PRJNA293172	293172	Terrabacteria group	Actinobacteria	9.57383	71.9	-	LWKZ01	29	8085	7716	12/15/16	3/15/17	Scaffold	The Scripps Research Institute	SAMN04853037	GCA_001905005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/005/GCA_001905005.1_ASM190500v1	27999165	CB02923
Streptomyces sp. CB03578	1718987	PRJNA293172	293172	Terrabacteria group	Actinobacteria	8.40175	72.3	-	LWLD01	42	7529	7194	12/15/16	3/15/17	Scaffold	The Scripps Research Institute	SAMN04857222	GCA_001905025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/025/GCA_001905025.1_ASM190502v1	27999165	CB03578
Pseudomonas sp. R14(2017)	1981706	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	5.99082	63.8	-	NEIJ01	51	5496	5319	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771368	GCA_002113525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/525/GCA_002113525.1_ASM211352v1	-	R14(2017)
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.17595	64.1	-	FSHE01	16	5210	5107	12/14/16	4/2/17	Contig	SC	SAMEA2070290	GCA_900135475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/475/GCA_900135475.1_10625_4_68	-	68
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.94981	55.9	-	FKBK01	51	4934	4672	4/6/16	3/28/17	Scaffold	SC	SAMEA2273434	GCA_900076365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/365/GCA_900076365.1_12045_5_12	-	e2032
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75033	31.2	-	FAZA01	24	1842	1744	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683026	GCA_001491195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/195/GCA_001491195.1_EC3731	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.75975	67.5	-	CSPZ01	615	3764	3060	3/22/15	3/26/17	Scaffold	SC	SAMEA1986112	GCA_001192535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/535/GCA_001192535.1_5463_7_5	-	B149
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.109	37.8	-	LNMJ01	141	3297	2979	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270955	GCA_001547025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/025/GCA_001547025.1_ASM154702v1	-	VRE-1402991
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.13323	52.6	-	CQJI01	71	2494	2178	3/22/15	4/11/17	Scaffold	SC	SAMEA1677312	GCA_001088845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/845/GCA_001088845.1_8727_5_60	-	GCGS210
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.14873	37.2	-	JVXY01	172	3296	3126	7/10/15	3/26/17	Contig	University of Washington	SAMN03197192	GCA_001053105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/105/GCA_001053105.1_ASM105310v1	26230489	1228_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.87406	56.9	-	LEVH01	5	5977	5696	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280239	GCA_001031065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/065/GCA_001031065.1_Kleb_pneu_CHS96_V1	-	CHS96
Vibrio parahaemolyticus	670	PRJNA275536	275536	Proteobacteria	Gammaproteobacteria	5.12035	45.3	-	JZAR01	115	4919	4705	3/23/15	3/25/17	Contig	Health Canada	SAMN03349606	GCA_000960685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/685/GCA_000960685.1_ASM96068v1	-	Sep-35
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.18329	28.7	-	MPGB01	293	3908	3695	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710928	GCA_002302585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/585/GCA_002302585.1_ASM230258v1	-	7457-NonSp/novelST
Vibrio cholerae	666	PRJNA339415	339415	Proteobacteria	Gammaproteobacteria	4.19304	47.3	-	MIOV01	216	4024	3761	10/14/16	3/28/17	Contig	Georgia Institute of Technology	SAMN05590409	GCA_001857175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/175/GCA_001857175.1_ASM185717v1	-	VC56
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.13164	68.2	-	LWZG01	135	7387	6817	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208674	GCA_001978585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/585/GCA_001978585.1_ASM197858v1	-	NAU14B-5
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.90246	50.5	-	CXLW01	427	5591	4737	7/16/15	2/24/17	Scaffold	SC	SAMEA2004913	GCA_001251635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/635/GCA_001251635.1_8290_5_8	-	36314706
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.41396	38.3	-	FJHC01	24	3121	3011	2/20/16	3/27/17	Contig	SC	SAMEA2077532	GCA_900062455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/455/GCA_900062455.1_10625_2_34	-	2532STDY5467507
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.10534	41.2	-	CZEJ01	62	2104	1961	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595187	GCA_900013565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/565/GCA_900013565.1_assembly_941372	-	-
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.02382	35.2	-	LDAO01	20	2095	1963	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435120	GCA_001016295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/295/GCA_001016295.1_ASM101629v1	25946017	SH3683
Acinetobacter baumannii UH13908	1398955	PRJNA218756	218756	Proteobacteria	Gammaproteobacteria	3.78136	39	-	AYGG01	62	3633	3493	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597411	GCA_000515655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/655/GCA_000515655.1_gabuh13908_v01	24449752	UH13908
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.11343	65.4	-	JTUW01	97	7004	6796	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105539	GCA_000794335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/335/GCA_000794335.1_AZPAE14838	25367914	AZPAE14838
Neisseria meningitidis	487	PRJNA384053	384053	Proteobacteria	Betaproteobacteria	2.12924	51.7	-	NGBL01	133	-	-	9/20/17	9/22/17	Contig	Harvard T.H. Chan School of Public Health	SAMN06827246	GCA_002318555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/555/GCA_002318555.1_ASM231855v1	28904187	NmJP05x2
Helicobacter pylori SA171A	1345579	PRJEB4090	216047	Proteobacteria	delta/epsilon subdivisions	1.61428	38.8	-	CBOA01	36	1580	1435	9/21/13	3/24/17	Contig	MHH	SAMEA2272051	GCA_000476055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/055/GCA_000476055.1_SA171A	23898187	SA171A
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.15136	39.6	-	CKVZ01	82	2407	2158	3/21/15	3/11/17	Contig	SC	SAMEA1026054	GCA_001089205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/205/GCA_001089205.1_6823_4_8	-	SMRU1928
Ureaplasma parvum serovar 3 str. ATCC 27815	505682	PRJNA19087	19087	Terrabacteria group	Tenericutes	0.751679	25.5	chromosome:NC_010503.1/CP000942.1	-	1	646	601	2/26/08	4/6/17	Complete Genome	TIGR	SAMN02604063	GCA_000019345.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/019/345/GCA_000019345.1_ASM1934v1	-	ATCC 27815
Mycobacterium tuberculosis TKK_04_0063	1448468	PRJNA235473	235473	Terrabacteria group	Actinobacteria	4.39362	65.6	-	JJXX01	4	4269	4107	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585963	GCA_000652495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/495/GCA_000652495.1_Myco_tube_TKK_04_0063_V1	-	TKK_04_0063
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.52425	32.2	-	JVFR01	78	2473	2344	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197667	GCA_001076465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/465/GCA_001076465.1_ASM107646v1	26230489	475_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.18949	35.3	-	NHVF01	50	5592	5296	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163259	GCA_002199555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/555/GCA_002199555.1_ASM219955v1	-	MOD1_Bc204
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09549	37.9	-	JPBF01	18	3146	3042	7/15/14	2/26/17	Contig	Cornell University	SAMN02741592	GCA_000728745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/745/GCA_000728745.1_ASM72874v1	-	FSL R8-7198
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.60475	30.5	-	CUNX01	24	1667	1576	3/31/15	3/18/17	Contig	SC	SAMEA1010587	GCA_001231105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/105/GCA_001231105.1_7065_7_71	-	OXC6419
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20094642	1412518	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007316.2/CP007316.2	-	1	4708	4451	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384239	GCA_000624135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/135/GCA_000624135.2_ASM62413v2	24786953	SA20094642
Staphylococcus aureus M1255	1158481	PRJNA88765	88765	Terrabacteria group	Firmicutes	2.94416	32.9	-	AIZA01	9	3087	2921	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809074	GCA_000363145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/145/GCA_000363145.1_Stap_aure_M1255_V1	-	M1255
Staphylococcus aureus M1256	1169271	PRJNA158791	158791	Terrabacteria group	Firmicutes	2.80312	32.9	-	AOBD01	2	2891	2709	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00839756	GCA_000363165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/165/GCA_000363165.1_Stap_aure_M1256_V1	-	M1256
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20092320	1412508	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007334.2/CP007334.2	-	1	4707	4448	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384229	GCA_000624195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/195/GCA_000624195.2_ASM62419v2	24786953	SA20092320
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.71183	30.2	-	CUPS01	26	1773	1632	3/31/15	3/18/17	Contig	SC	SAMEA1010290	GCA_001231165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/165/GCA_001231165.1_7092_1_28	-	OXC6475
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	2.94918	37.9	-	JPBL01	16	3002	2910	7/15/14	2/26/17	Contig	Cornell University	SAMN02741598	GCA_000728765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/765/GCA_000728765.1_ASM72876v1	-	FSL R8-7450
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	6.63366	34.5	-	NHVI01	255	7016	6591	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163256	GCA_002199565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/565/GCA_002199565.1_ASM219956v1	-	MOD1_Bc208
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.5138	32.1	-	JVFP01	77	2474	2342	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197669	GCA_001076495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/495/GCA_001076495.1_ASM107649v1	26230489	477_SEPI
Mycobacterium tuberculosis TKK_04_0064	1448469	PRJNA235474	235474	Terrabacteria group	Actinobacteria	4.40667	65.6	-	JJXW01	1	4281	4115	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585964	GCA_000652515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/515/GCA_000652515.1_Myco_tube_TKK_04_0064_V1	-	TKK_04_0064
Ureaplasma parvum serovar 3 str. ATCC 700970	273119	PRJNA101	101	Terrabacteria group	Tenericutes	0.751719	25.5	chromosome:NC_002162.1/AF222894.1	-	1	647	591	1/10/00	4/6/17	Complete Genome	Univ.AL-Birmingham	SAMN02604098	GCA_000006625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/006/625/GCA_000006625.1_ASM662v1	11048724	ATCC 700970
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09759	39.6	-	CODB02	154	2274	2056	3/23/15	3/11/17	Contig	SC	SAMEA1462996	GCA_001089245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/245/GCA_001089245.2_7622_4_1	-	GL3071
Helicobacter pylori SA158A	1345558	PRJEB4069	216027	Proteobacteria	delta/epsilon subdivisions	1.61468	39.1	-	CBOL01	36	1597	1345	9/21/13	8/8/17	Contig	MHH	SAMEA2272553	GCA_000476075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/075/GCA_000476075.1_SA158A	23898187	SA158A
Neisseria meningitidis	487	PRJNA384053	384053	Proteobacteria	Betaproteobacteria	2.12342	51.7	-	NGBM01	90	-	-	9/20/17	9/22/17	Contig	Harvard T.H. Chan School of Public Health	SAMN06827245	GCA_002318565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/565/GCA_002318565.1_ASM231856v1	28904187	NmJP05x1
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.61508	66.2	-	JTUV01	76	6313	6124	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105540	GCA_000794365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/365/GCA_000794365.1_AZPAE14839	25367914	AZPAE14839
Acinetobacter baumannii UH14508	1398956	PRJNA218757	218757	Proteobacteria	Gammaproteobacteria	4.2021	39	-	AYGF01	138	4143	3974	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597410	GCA_000515675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/675/GCA_000515675.1_gabuh14508_v01	24449752	UH14508
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.09085	35.3	-	LDAP01	34	2151	1964	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435092	GCA_001016335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/335/GCA_001016335.1_ASM101633v1	25946017	379415
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.01178	41.4	-	CZGR01	78	2066	1881	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595260	GCA_900013575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/575/GCA_900013575.1_assembly_GD-0108	-	-
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.41367	38.3	-	FJHL01	22	3128	3013	2/20/16	3/27/17	Contig	SC	SAMEA2077533	GCA_900062475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/475/GCA_900062475.1_10625_2_37	-	2532STDY5467510
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.69371	50.8	-	CXHV01	392	5220	4505	7/16/15	2/24/17	Scaffold	SC	SAMEA1968332	GCA_001251655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/655/GCA_001251655.1_8289_7_50	-	75915
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.15268	68.2	-	LWZH01	104	7420	6828	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208675	GCA_001978605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/605/GCA_001978605.1_ASM197860v1	-	NAU14B-6
Vibrio cholerae	666	PRJNA339415	339415	Proteobacteria	Gammaproteobacteria	3.94344	47.7	-	MIOX01	151	3714	3524	10/14/16	3/28/17	Contig	Georgia Institute of Technology	SAMN05590411	GCA_001857225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/225/GCA_001857225.1_ASM185722v1	-	2631-78
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.11349	29.2	-	MPEZ01	451	3763	3543	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710931	GCA_002302685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/685/GCA_002302685.1_ASM230268v1	-	7461-BK/ST11
Vibrio parahaemolyticus	670	PRJNA275536	275536	Proteobacteria	Gammaproteobacteria	5.178	45.3	-	LASL01	49	4945	4717	4/15/15	3/26/17	Contig	Health Canada	SAMN03452299	GCA_000972025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/025/GCA_000972025.1_ASM97202v1	-	Sep-81
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.87068	56.9	-	LEVI01	9	5947	5665	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280240	GCA_001031075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/075/GCA_001031075.1_Kleb_pneu_CHS97_V1	-	CHS97
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.18577	37.2	-	JVXC01	143	3332	3162	7/10/15	3/26/17	Contig	University of Washington	SAMN03197214	GCA_001053145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/145/GCA_001053145.1_ASM105314v1	26230489	1248_EFLS
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.1478	52.5	-	CQIM01	70	2539	2200	3/23/15	4/11/17	Scaffold	SC	SAMEA1690376	GCA_001090725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/725/GCA_001090725.1_8289_2_82	-	GCGS082
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.13108	37.7	-	LNMK01	117	3323	2985	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270956	GCA_001547045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/045/GCA_001547045.1_ASM154704v1	-	VRE-1403299
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.78947	67.8	-	CSSA01	705	3825	3181	3/23/15	3/26/17	Scaffold	SC	SAMEA751509	GCA_001193155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/155/GCA_001193155.1_5476_6_11	-	B014
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.72091	31.1	-	FAYX01	32	1786	1667	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683038	GCA_001491215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/215/GCA_001491215.1_H130600457	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.94792	55.4	-	FKBL01	28	4849	4639	4/6/16	3/28/17	Scaffold	SC	SAMEA2273435	GCA_900076375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/375/GCA_900076375.1_12045_5_13	-	e2048
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.17518	64.1	-	FSHC01	16	5208	5105	12/14/16	3/21/17	Contig	SC	SAMEA1965955	GCA_900135485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/485/GCA_900135485.1_10625_4_66	-	66
Pseudomonas sp. R10(2017)	1981709	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	5.9805	63.7	-	NEIM01	67	5512	5325	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771365	GCA_002113545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/545/GCA_002113545.1_ASM211354v1	-	R10(2017)
Streptomyces sp. CB03911	1804758	PRJNA293172	293172	Terrabacteria group	Actinobacteria	9.59867	73.5	-	LWLA01	49	8316	7937	12/15/16	3/15/17	Scaffold	The Scripps Research Institute	SAMN04853764	GCA_001905045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/045/GCA_001905045.1_ASM190504v1	27999165	CB03911
Streptomyces sp. TSRI0281	1718998	PRJNA293172	293172	Terrabacteria group	Actinobacteria	9.62701	70.6	-	LWLE01	38	8528	7930	12/15/16	3/14/17	Scaffold	The Scripps Research Institute	SAMN04857230	GCA_001905125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/125/GCA_001905125.1_ASM190512v1	27999165	TSRI0281
Pseudomonas sp. B4(2017)	1981715	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	5.92488	63.5	-	NEIS01	64	5428	5228	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771359	GCA_002113565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/565/GCA_002113565.1_ASM211356v1	-	B4(2017)
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.17595	64.1	-	FSHB01	16	5210	5107	12/14/16	3/21/17	Contig	SC	SAMEA2070289	GCA_900135495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/495/GCA_900135495.1_10625_4_65	-	65
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.03299	55.6	-	FKBI01	47	5023	4782	4/6/16	3/28/17	Scaffold	SC	SAMEA2273432	GCA_900076385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/385/GCA_900076385.1_12045_5_10	-	e2022
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.77092	31.2	-	FBFU01	60	1831	1703	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683215	GCA_001491235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/235/GCA_001491235.1_B15B3	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.7734	67.7	-	CSMK01	630	3768	3161	3/22/15	3/26/17	Scaffold	SC	SAMEA751250	GCA_001193455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/455/GCA_001193455.1_5601_3_5	-	B328
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.04171	38	-	LNLQ01	312	3231	2894	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270936	GCA_001547075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/075/GCA_001547075.1_ASM154707v1	-	VRE-1400413
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14676	52.4	-	CQHK01	66	2508	2179	3/23/15	4/11/17	Scaffold	SC	SAMEA1690503	GCA_001091205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/205/GCA_001091205.1_8727_8_4	-	GCGS100
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.2219	37.3	-	JVUK01	117	3364	3192	7/10/15	3/26/17	Contig	University of Washington	SAMN03197284	GCA_001053335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/335/GCA_001053335.1_ASM105333v1	26230489	1308_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.91768	56.9	-	LEVJ01	5	5994	5706	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280241	GCA_001031095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/095/GCA_001031095.1_Kleb_pneu_CHS98_V1	-	CHS98
Vibrio parahaemolyticus	670	PRJNA275536	275536	Proteobacteria	Gammaproteobacteria	5.19667	45.2	-	LASK01	89	5068	4789	4/15/15	3/26/17	Contig	Health Canada	SAMN03452294	GCA_000972035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/035/GCA_000972035.1_ASM97203v1	-	Sep-64
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.17301	28.5	-	MPFF01	104	3905	3734	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710940	GCA_002302725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/725/GCA_002302725.1_ASM230272v1	-	7472-Y/ST2
Vibrio cholerae	666	PRJNA339415	339415	Proteobacteria	Gammaproteobacteria	3.99988	47.6	-	MIOY01	175	3816	3676	10/14/16	3/28/17	Contig	Georgia Institute of Technology	SAMN05590413	GCA_001857245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/245/GCA_001857245.1_ASM185724v1	-	2512-86
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.15178	68.2	-	LWZI01	86	7405	6828	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208676	GCA_001978615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/615/GCA_001978615.1_ASM197861v1	-	NAU14B-8
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.46284	50.6	-	CXBO01	406	4766	4254	7/16/15	2/24/17	Scaffold	SC	SAMEA954578	GCA_001251675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/675/GCA_001251675.1_5236_2_4	-	ShIB1993_440756
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.38854	38.2	-	FJHO01	22	3099	3001	2/20/16	3/27/17	Contig	SC	SAMEA2077499	GCA_900062485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/485/GCA_900062485.1_10625_2_45	-	2532STDY5467518
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.17602	41	-	CZHA01	125	2180	2037	6/30/16	3/20/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595267	GCA_900014835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/835/GCA_900014835.1_assembly_GD-0120	-	-
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.04119	35.2	-	LCZY01	32	2092	1918	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435104	GCA_001016355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/355/GCA_001016355.1_ASM101635v1	25946017	SH0248
Acinetobacter baumannii UH15208	1398957	PRJNA218758	218758	Proteobacteria	Gammaproteobacteria	4.21735	39	-	AYGE01	142	4170	3990	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597409	GCA_000515695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/695/GCA_000515695.1_gabuh15208_v01	24449752	UH15208
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.10168	65.8	-	JTXV01	119	6844	6602	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105462	GCA_000794405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/405/GCA_000794405.1_AZPAE14554	25367914	AZPAE14554
Neisseria meningitidis	487	PRJNA384053	384053	Proteobacteria	Betaproteobacteria	2.12557	51.8	-	NGBN01	137	-	-	9/20/17	9/22/17	Contig	Harvard T.H. Chan School of Public Health	SAMN06827244	GCA_002318575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/318/575/GCA_002318575.1_ASM231857v1	28904187	NmJP04x1
Helicobacter pylori SA162A	1345564	PRJEB4075	216074	Proteobacteria	delta/epsilon subdivisions	1.66738	39	-	CBOS01	71	1660	1461	9/21/13	3/24/17	Contig	MHH	SAMEA2272133	GCA_000476115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/115/GCA_000476115.1_SA162A	23898187	SA162A
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00335	39.7	-	CNZP02	109	2178	1980	3/23/15	3/11/17	Contig	SC	SAMEA1463018	GCA_001089285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/285/GCA_001089285.2_7553_5_75	-	PT8037
Buchnera aphidicola str. G002 (Myzus persicae)	1009858	PRJNA66105	66105	Proteobacteria	Gammaproteobacteria	0.651316	25.4084	chromosome:NZ_CP002701.1/CP002701.1; plasmid pLeu:NZ_CP002702.1/CP002702.1	-	2	633	587	1/22/14	3/14/17	Complete Genome	University of Miami	SAMN02641631	GCA_000521565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/565/GCA_000521565.1_ASM52156v1	24365332	G002
Mycobacterium tuberculosis TKK_04_0066	1448470	PRJNA235475	235475	Terrabacteria group	Actinobacteria	4.41557	65.6	-	JJXV01	1	4282	4114	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585965	GCA_000652535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/535/GCA_000652535.1_Myco_tube_TKK_04_0066_V1	-	TKK_04_0066
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.42735	32	-	JVMM01	88	2367	2236	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197490	GCA_001076655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/655/GCA_001076655.1_ASM107665v1	26230489	295_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.18089	35.3	-	NHVJ01	112	5632	5315	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163255	GCA_002199615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/615/GCA_002199615.1_ASM219961v1	-	MOD1_Bc212
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	2.94972	37.9	-	JPBG01	17	3012	2909	7/15/14	2/26/17	Contig	Cornell University	SAMN02741593	GCA_000728775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/775/GCA_000728775.1_ASM72877v1	-	FSL R8-7348
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.6608	30.4	-	CUOM01	16	1764	1633	3/31/15	3/18/17	Contig	SC	SAMEA1010248	GCA_001231185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/185/GCA_001231185.1_7065_7_83	-	OXC6431
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20094803	1412503	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007317.2/CP007317.2	-	1	4710	4452	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384224	GCA_000624215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/215/GCA_000624215.2_ASM62421v2	24786953	SA20094803
Staphylococcus aureus M1257	1158482	PRJNA88767	88767	Terrabacteria group	Firmicutes	2.84368	32.8	-	AIZB01	5	2974	2810	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809075	GCA_000363185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/185/GCA_000363185.1_Stap_aure_M1257_V1	-	M1257
Staphylococcus aureus M1275	1169272	PRJNA158793	158793	Terrabacteria group	Firmicutes	2.88603	32.9	-	AOBE01	6	3025	2855	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00839757	GCA_000363205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/205/GCA_000363205.1_Stap_aure_M1275_V1	-	M1275
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20095309	1412507	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007318.2/CP007318.2	-	1	4709	4450	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384228	GCA_000624235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/235/GCA_000624235.2_ASM62423v2	24786953	SA20095309
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.7104	30.3	-	CUMB01	24	1793	1655	3/31/15	3/18/17	Contig	SC	SAMEA1010569	GCA_001231205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/205/GCA_001231205.1_7065_7_28	-	OXC6374
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.11767	37.9	-	JPBE01	25	3171	3086	7/15/14	2/26/17	Contig	Cornell University	SAMN02741591	GCA_000728805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/805/GCA_000728805.1_ASM72880v1	-	FSL R8-7161
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.10292	35.4	-	NHVK01	119	5575	5237	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163254	GCA_002199625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/625/GCA_002199625.1_ASM219962v1	-	MOD1_Bc213
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.54955	31.9	-	JUSO01	128	2545	2427	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198008	GCA_001077065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/065/GCA_001077065.1_ASM107706v1	26230489	795_SEPI
Mycobacterium tuberculosis TKK_04_0067	1448471	PRJNA235476	235476	Terrabacteria group	Actinobacteria	4.41526	65.6	-	JJXU01	4	4292	4126	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585966	GCA_000652555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/555/GCA_000652555.1_Myco_tube_TKK_04_0067_V1	-	TKK_04_0067
Buchnera aphidicola str. USDA (Myzus persicae)	1009856	PRJNA66101	66101	Proteobacteria	Gammaproteobacteria	0.651306	25.4084	chromosome:NZ_CP002697.1/CP002697.1; plasmid pLeu:NZ_CP002698.1/CP002698.1	-	2	632	590	1/22/14	3/14/17	Complete Genome	University of Miami	SAMN02641629	GCA_000521525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/525/GCA_000521525.1_ASM52152v1	24365332	USDA
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05545	39.6	-	CNUG02	149	2221	2021	3/23/15	3/5/17	Contig	SC	SAMEA1032608	GCA_001089445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/445/GCA_001089445.2_6999_5_7	-	160449
Helicobacter pylori SA163C	1345567	PRJEB4078	216036	Proteobacteria	delta/epsilon subdivisions	1.61789	39.1	-	CBOW01	35	1591	1418	9/21/13	3/24/17	Contig	MHH	SAMEA2272431	GCA_000476135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/135/GCA_000476135.1_SA163C	23898187	SA163C
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15298	51.6	-	FERL01	86	2497	2163	2/9/16	3/19/17	Contig	SC	SAMEA2673936	GCA_900027825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/825/GCA_900027825.1_14355_4_53	-	2842STDY5881010
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.31717	66.5	-	JTXW01	56	5978	5819	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105461	GCA_000794425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/425/GCA_000794425.1_AZPAE14550	25367914	AZPAE14550
Acinetobacter baumannii UH16008	1398958	PRJNA218759	218759	Proteobacteria	Gammaproteobacteria	4.21824	39	-	AYGD01	136	4172	3996	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597408	GCA_000515715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/715/GCA_000515715.1_gabuh16008_v01	24449752	UH16008
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.16549	35.4	-	LCZX01	38	2245	2097	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435103	GCA_001016375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/375/GCA_001016375.1_ASM101637v1	25946017	ML41151
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.11432	41.1	-	FIFL01	52	2154	2013	2/10/16	3/19/17	Contig	SC	SAMEA1316625	GCA_900048825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/825/GCA_900048825.1_7114_5_1	-	LSS1
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.44314	38.3	-	FJHS01	31	3126	3005	2/20/16	3/27/17	Contig	SC	SAMEA1966344	GCA_900062495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/495/GCA_900062495.1_10771_3_39	-	2531STDY5467416
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.67646	50.9	-	CXHX01	378	5250	4492	7/16/15	2/24/17	Scaffold	SC	SAMEA2003850	GCA_001251695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/695/GCA_001251695.1_8289_7_52	-	77257
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.71279	68.1	-	LWZJ01	118	6959	6412	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208677	GCA_001978635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/635/GCA_001978635.1_ASM197863v1	-	NAU14B-9
Vibrio cholerae	666	PRJNA339415	339415	Proteobacteria	Gammaproteobacteria	3.9468	47.6	-	MIOZ01	130	3762	3596	10/14/16	3/28/17	Contig	Georgia Institute of Technology	SAMN05590414	GCA_001857265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/265/GCA_001857265.1_ASM185726v1	-	3272-78
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.03296	28.5	-	MPFG01	341	3670	3511	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710941	GCA_002302745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/745/GCA_002302745.1_ASM230274v1	-	7473-DH/ST42
Vibrio parahaemolyticus	670	PRJNA275536	275536	Proteobacteria	Gammaproteobacteria	5.25183	45.1	-	LASG01	88	5077	4851	4/15/15	3/26/17	Contig	Health Canada	SAMN03452290	GCA_000972045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/045/GCA_000972045.1_ASM97204v1	-	07-1339
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.7707	56.9	-	LEVK01	9	5846	5570	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280242	GCA_001031105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/105/GCA_001031105.1_Kleb_pneu_CHS99_V1	-	CHS99
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.99657	37.5	-	JVSW01	88	3046	2880	7/10/15	3/26/17	Contig	University of Washington	SAMN03197324	GCA_001053495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/495/GCA_001053495.1_ASM105349v1	26230489	135_EFLS
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14394	52.4	-	CQIT01	74	2506	2188	3/22/15	4/11/17	Scaffold	SC	SAMEA1690448	GCA_001097705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/705/GCA_001097705.1_8727_8_18	-	GCGS114
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.045	38	-	LNLU01	219	3242	2900	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270940	GCA_001547095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/095/GCA_001547095.1_ASM154709v1	-	VRE-1401379
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.80508	67.9	-	CSQL01	487	3727	3259	3/23/15	3/26/17	Scaffold	SC	SAMEA751169	GCA_001193515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/515/GCA_001193515.1_5601_5_6	-	B311
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66897	31.3	-	FBNR01	34	1726	1620	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683417	GCA_001491255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/255/GCA_001491255.1_H043880651	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.95116	55.4	-	FKBM01	29	4851	4632	4/6/16	3/28/17	Scaffold	SC	SAMEA2273436	GCA_900076395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/395/GCA_900076395.1_12045_5_14	-	e2049
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.17507	64.1	-	FSHD01	17	5210	5102	12/14/16	3/21/17	Contig	SC	SAMEA2071195	GCA_900135515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/515/GCA_900135515.1_10625_4_67	-	67
Pseudomonas sp. B8(2017)	1981711	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	5.89036	63.4	-	NEIO01	56	5373	5179	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771363	GCA_002113575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/575/GCA_002113575.1_ASM211357v1	-	B8(2017)
Streptomyces sp. CB02488	1703920	PRJNA293172	293172	Terrabacteria group	Actinobacteria	8.8923	71	-	LIVO01	33	7807	7504	12/15/16	3/15/17	Scaffold	The Scripps Research Institute	SAMN03999369	GCA_001905365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/365/GCA_001905365.1_ASM190536v1	27999165	CB02488
Streptomyces sp. CB02414	1703922	PRJNA293172	293172	Terrabacteria group	Actinobacteria	7.9875	72	-	LIPF01	19	7363	7028	12/15/16	3/14/17	Scaffold	The Scripps Research Institute	SAMN03999371	GCA_001905385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/385/GCA_001905385.1_ASM190538v1	27999165	CB02414
Pseudomonas sp. B3(2017)	1981717	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.20796	64.8	-	NEIU01	55	5595	5452	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771357	GCA_002113595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/595/GCA_002113595.1_ASM211359v1	-	B3(2017)
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.17552	64.1	-	FSHI01	20	5213	5110	12/14/16	4/2/17	Contig	SC	SAMEA2070291	GCA_900135525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/525/GCA_900135525.1_10625_4_71	-	71
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.96013	55.4	-	FKBP01	72	4943	4707	4/6/16	3/28/17	Scaffold	SC	SAMEA2273438	GCA_900076405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/405/GCA_900076405.1_12045_5_16	-	e2071
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.84491	31.1	-	FBFI01	47	1919	1802	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683200	GCA_001491275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/275/GCA_001491275.1_EC5496	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.70832	67.7	-	CSQI01	863	3722	3038	3/23/15	3/26/17	Scaffold	SC	SAMEA751353	GCA_001193835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/835/GCA_001193835.1_5476_3_1	-	B095
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.07656	37.9	-	LNMD01	276	3330	2936	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270949	GCA_001547105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/105/GCA_001547105.1_ASM154710v1	-	VRE-1402259
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.15256	52.4	-	CQLD01	72	2516	2191	3/22/15	4/11/17	Scaffold	SC	SAMEA1690344	GCA_001100365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/365/GCA_001100365.1_8727_8_19	-	GCGS115
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.92289	37.3	-	JVZS01	114	2927	2813	7/10/15	3/26/17	Contig	University of Washington	SAMN03197146	GCA_001054015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/015/GCA_001054015.1_ASM105401v1	26230489	1187_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.72122	56.9	-	LEVL01	11	5833	5555	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280243	GCA_001031145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/145/GCA_001031145.1_Kleb_pneu_CHS100_V1	-	CHS100
Vibrio parahaemolyticus	670	PRJNA275536	275536	Proteobacteria	Gammaproteobacteria	5.19181	45.2	-	LASJ01	73	5065	4796	4/15/15	3/26/17	Contig	Health Canada	SAMN03452293	GCA_000972055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/055/GCA_000972055.1_ASM97205v1	-	Sep-60
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.41876	28.3	-	MPEL01	158	4104	3915	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710938	GCA_002302755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/755/GCA_002302755.1_ASM230275v1	-	7468-NonSp/ST97
Vibrio cholerae	666	PRJNA339415	339415	Proteobacteria	Gammaproteobacteria	3.93808	47.6	-	MIPA01	104	3705	3542	10/14/16	3/28/17	Contig	Georgia Institute of Technology	SAMN05590415	GCA_001857285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/285/GCA_001857285.1_ASM185728v1	-	692-79
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.12936	68.2	-	LWZK01	147	7395	6811	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208678	GCA_001978665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/665/GCA_001978665.1_ASM197866v1	-	NAU14B-10
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.81565	50.7	-	CXNE01	407	5453	4659	7/17/15	2/24/17	Scaffold	SC	SAMEA2057224	GCA_001251715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/715/GCA_001251715.1_9870_6_41	-	143986
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.38621	38.3	-	FJHT01	18	3068	2952	2/20/16	3/27/17	Contig	SC	SAMEA2058469	GCA_900062505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/505/GCA_900062505.1_10060_4_64	-	2531STDY5467345
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.14875	41.2	-	FIHH01	27	2139	2009	2/10/16	3/19/17	Contig	SC	SAMEA1316662	GCA_900048835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/835/GCA_900048835.1_7114_5_60	-	LSS60
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.13745	35.4	-	LCZZ01	32	2196	2054	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435105	GCA_001016385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/385/GCA_001016385.1_ASM101638v1	25946017	SH0334
Acinetobacter baumannii UH16108	1398959	PRJNA218760	218760	Proteobacteria	Gammaproteobacteria	3.87308	39	-	AYGC01	117	3754	3595	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597407	GCA_000515735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/735/GCA_000515735.1_gabuh16108_v01	24449752	UH16108
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.77279	66.1	-	JTXU01	82	6484	6298	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105463	GCA_000794445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/445/GCA_000794445.1_AZPAE14557	25367914	AZPAE14557
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16391	51.6	-	FERF01	84	2517	2178	2/9/16	3/19/17	Contig	SC	SAMEA2673894	GCA_900032435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/435/GCA_900032435.1_14355_4_40	-	2842STDY5880997
Helicobacter pylori SA37C	1345525	PRJEB4050	215921	Proteobacteria	delta/epsilon subdivisions	1.54546	39.2	-	CBOP01	106	1576	1385	9/21/13	3/24/17	Contig	MHH	SAMEA2272166	GCA_000476155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/155/GCA_000476155.1_SA37C	23898187	SA37C
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11486	39.5	-	CMPO01	63	2313	2095	3/23/15	3/11/17	Contig	SC	SAMEA2061723	GCA_001089525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/525/GCA_001089525.1_9803_7_58	-	23F
Buchnera aphidicola str. W106 (Myzus persicae)	1009857	PRJNA66103	66103	Proteobacteria	Gammaproteobacteria	0.651304	25.4084	chromosome:NZ_CP002699.1/CP002699.1; plasmid pLeu:NZ_CP002700.1/CP002700.1	-	2	632	588	1/22/14	3/14/17	Complete Genome	University of Miami	SAMN02641630	GCA_000521545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/545/GCA_000521545.1_ASM52154v1	24365332	W106
Mycobacterium tuberculosis TKK_04_0068	1448472	PRJNA235477	235477	Terrabacteria group	Actinobacteria	4.39193	65.6	-	JJXT01	3	4262	4099	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585967	GCA_000652575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/575/GCA_000652575.1_Myco_tube_TKK_04_0068_V1	-	TKK_04_0068
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.55253	32	-	JUUB01	104	2556	2430	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197969	GCA_001077145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/145/GCA_001077145.1_ASM107714v1	26230489	760_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.44685	35.1	-	NHYF01	68	5871	5528	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163253	GCA_002199635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/635/GCA_002199635.1_ASM219963v1	-	MOD1_Bc214
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09482	37.7	-	JPBK01	23	3184	3096	7/15/14	2/26/17	Contig	Cornell University	SAMN02741597	GCA_000728825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/825/GCA_000728825.1_ASM72882v1	-	FSL R8-7427
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.72337	30.3	-	CUOS01	15	1828	1699	3/31/15	3/18/17	Contig	SC	SAMEA1010377	GCA_001231245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/245/GCA_001231245.1_7065_7_90	-	OXC6438
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20095440	1412492	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007319.1/CP007319.2	-	1	4762	4499	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384213	GCA_000624255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/255/GCA_000624255.2_ASM62425v2	24786953	SA20095440
Staphylococcus aureus M1277	1158483	PRJNA88769	88769	Terrabacteria group	Firmicutes	2.86132	32.9	-	AIZC01	5	3000	2829	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809076	GCA_000363225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/225/GCA_000363225.1_Stap_aure_M1277_V1	-	M1277
Staphylococcus aureus M1286	1169273	PRJNA158795	158795	Terrabacteria group	Firmicutes	2.85746	32.8	-	AOBF01	15	2985	2825	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00839758	GCA_000363245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/245/GCA_000363245.1_Stap_aure_M1286_V1	-	M1286
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110222	1412456	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.6862	52.2	chromosome:NZ_CP007323.2/CP007323.2	-	1	4710	4448	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384175	GCA_000624275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/275/GCA_000624275.2_ASM62427v2	24786953	EC20110222
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.61786	30.4	-	CULX01	19	1707	1599	3/31/15	3/18/17	Contig	SC	SAMEA1010600	GCA_001231345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/345/GCA_001231345.1_7065_7_24	-	OXC6370
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.12491	37.9	-	JPBR01	20	3178	3065	7/15/14	2/26/17	Contig	Cornell University	SAMN02741604	GCA_000728845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/845/GCA_000728845.1_ASM72884v1	-	FSL R8-7534
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.49986	35.1	-	NHVL01	65	5906	5563	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163289	GCA_002199645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/645/GCA_002199645.1_ASM219964v1	-	MOD1_Bc216
Staphylococcus epidermidis	1282	PRJEB11651	307680	Terrabacteria group	Firmicutes	2.47197	31.9	-	CZRO01	162	-	-	1/4/16	1/20/16	Scaffold	UNIVERSITY OF LIVERPOOL	SAMEA3644459	GCA_001511655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/655/GCA_001511655.1_SETU.1	-	-
Mycobacterium tuberculosis TKK_04_0069	1448473	PRJNA235478	235478	Terrabacteria group	Actinobacteria	4.41556	65.6	-	JJXS01	3	4288	4117	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585968	GCA_000652595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/595/GCA_000652595.1_Myco_tube_TKK_04_0069_V1	-	TKK_04_0069
Buchnera aphidicola str. F009 (Myzus persicae)	1009859	PRJNA66107	66107	Proteobacteria	Gammaproteobacteria	0.65131	25.4084	chromosome:NZ_CP002703.1/CP002703.1; plasmid pLeu:NZ_CP002704.1/CP002704.1	-	2	633	589	1/22/14	3/14/17	Complete Genome	University of Miami	SAMN02641632	GCA_000521585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/585/GCA_000521585.1_ASM52158v1	24365332	F009
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.03803	39.7	-	CLSO01	66	2239	2026	3/21/15	3/4/17	Contig	SC	SAMEA1028971	GCA_001089665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/665/GCA_001089665.1_6972_4_1	-	9V
Helicobacter pylori SA302A	1345549	PRJEB4133	216016	Proteobacteria	delta/epsilon subdivisions	1.56353	39.1	-	CBOF01	63	1552	1378	9/21/13	3/24/17	Contig	MHH	SAMEA2272546	GCA_000476175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/175/GCA_000476175.1_SA302A	23898187	SA302A
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11303	51.8	-	FERU01	70	2471	2126	2/9/16	3/21/17	Contig	SC	SAMEA2674011	GCA_900034555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/555/GCA_900034555.1_14355_4_76	-	2842STDY5881033
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.09469	66	-	JTXS01	145	6926	6676	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105465	GCA_000794455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/455/GCA_000794455.1_AZPAE14570	25367914	AZPAE14570
Acinetobacter baumannii UH16208	1398960	PRJNA218761	218761	Proteobacteria	Gammaproteobacteria	4.14018	38.9	-	AYGB01	231	4015	3788	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597406	GCA_000515755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/755/GCA_000515755.1_gabuh16208_v01	24449752	UH16208
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.05531	35.3	-	LDAL01	24	2120	1989	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435117	GCA_001016415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/415/GCA_001016415.1_ASM101641v1	25946017	SH2898
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.18041	41	-	FIIL01	54	2223	2069	2/10/16	3/19/17	Contig	SC	SAMEA1316661	GCA_900048845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/845/GCA_900048845.1_7114_5_87	-	LSS87
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.38561	38.3	-	FJHV01	28	3074	2952	2/20/16	3/27/17	Contig	SC	SAMEA2064374	GCA_900062515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/515/GCA_900062515.1_10771_3_40	-	2531STDY5467417
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.84271	50.4	-	CWWQ01	455	5478	4564	7/16/15	2/24/17	Scaffold	SC	SAMEA2247156	GCA_001251735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/735/GCA_001251735.1_11822_8_62	-	Aug-16
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.15247	68.2	-	LWZM01	88	7403	6837	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208680	GCA_001978675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/675/GCA_001978675.1_ASM197867v1	-	NAU20B-5
Vibrio cholerae	666	PRJNA339415	339415	Proteobacteria	Gammaproteobacteria	4.01144	47.7	-	MIPB01	152	3851	3680	10/14/16	3/28/17	Contig	Georgia Institute of Technology	SAMN05590416	GCA_001857305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/305/GCA_001857305.1_ASM185730v1	-	2479-86
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.14069	28.6	-	MPFE01	142	3794	3643	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710939	GCA_002302765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/765/GCA_002302765.1_ASM230276v1	-	7471-BI/ST1
Vibrio parahaemolyticus	670	PRJNA275536	275536	Proteobacteria	Gammaproteobacteria	5.2544	45.2	-	LASM01	76	5037	4787	4/15/15	3/26/17	Contig	Health Canada	SAMN03452300	GCA_000972105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/105/GCA_000972105.1_ASM97210v1	-	Oct-43
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.81007	56.9	-	LEVM01	7	5904	5617	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280244	GCA_001031155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/155/GCA_001031155.1_Kleb_pneu_CHS101_V1	-	CHS101
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.08145	37.1	-	JVZM01	137	3128	2975	7/10/15	3/26/17	Contig	University of Washington	SAMN03197152	GCA_001054035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/035/GCA_001054035.1_ASM105403v1	26230489	1192_EFLS
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.1443	52.4	-	CQOA01	74	2509	2196	3/23/15	4/11/17	Scaffold	SC	SAMEA1690463	GCA_001100605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/605/GCA_001100605.1_8727_8_31	-	GCGS127
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.16943	37.8	-	LNME01	154	3385	3042	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270950	GCA_001547115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/115/GCA_001547115.1_ASM154711v1	-	VRE-1402435
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.73769	67.7	-	CSMG01	998	3777	3044	3/23/15	3/26/17	Scaffold	SC	SAMEA751502	GCA_001193855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/855/GCA_001193855.1_5476_7_3	-	B035
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75582	31.2	-	FBEZ01	21	1834	1745	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683190	GCA_001491295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/295/GCA_001491295.1_EC4098	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.79486	55.5	-	FKBN01	30	4652	4445	4/6/16	3/28/17	Scaffold	SC	SAMEA2273437	GCA_900076415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/415/GCA_900076415.1_12045_5_15	-	e2054
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.47093	64.1	-	FVLB01	89	5589	5359	3/10/17	3/18/17	Contig	SC	SAMEA2070298	GCA_900135545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/545/GCA_900135545.1_10625_5_10	-	95
Pseudomonas sp. B38(2017)	1981719	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.27344	60.7	-	NEIW01	16	5678	5532	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771355	GCA_002113625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/625/GCA_002113625.1_ASM211362v1	-	B38(2017)
Streptomyces sp. TSRI0445	1703925	PRJNA293172	293172	Terrabacteria group	Actinobacteria	7.76986	71.6	-	LIPC01	19	6943	6620	12/15/16	3/15/17	Scaffold	The Scripps Research Institute	SAMN03999374	GCA_001905405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/405/GCA_001905405.1_ASM190540v1	27999165	TSRI0445
Streptomyces sp. MJM1172	1703926	PRJNA293172	293172	Terrabacteria group	Actinobacteria	8.0482	72.4	-	LIVP01	69	7373	6918	12/15/16	3/15/17	Scaffold	The Scripps Research Institute	SAMN03999375	GCA_001905425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/425/GCA_001905425.1_ASM190542v1	27999165	MJM1172
Pseudomonas sp. B35(2017)	1981722	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.23764	64.7	-	NEIZ01	54	5600	5442	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771352	GCA_002113645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/645/GCA_002113645.1_ASM211364v1	-	B35(2017)
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23099	64	-	FSHH01	22	5262	5150	12/14/16	3/21/17	Contig	SC	SAMEA2070702	GCA_900135555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/555/GCA_900135555.1_10625_4_72	-	72
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.89149	55	-	FKBO01	33	4827	4567	4/6/16	3/28/17	Scaffold	SC	SAMEA2273439	GCA_900076425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/425/GCA_900076425.1_12045_5_17	-	e2090
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75404	31.1	-	FBKZ01	28	1819	1697	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683351	GCA_001491315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/315/GCA_001491315.1_H062580346	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.73862	67.7	-	CSON01	939	3780	3077	3/22/15	3/26/17	Scaffold	SC	SAMEA751147	GCA_001193935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/935/GCA_001193935.1_5601_2_3	-	B084
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.38441	37.8	-	LNMF01	153	3655	3288	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270951	GCA_001547155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/155/GCA_001547155.1_ASM154715v1	-	VRE-1402513
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14916	52.4	-	CQKV01	73	2527	2199	3/23/15	4/11/17	Scaffold	SC	SAMEA1690430	GCA_001102205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/205/GCA_001102205.1_8727_8_39	-	GCGS135
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.8754	37.5	-	JVVS01	51	2883	2776	7/10/15	3/26/17	Contig	University of Washington	SAMN03197250	GCA_001054295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/295/GCA_001054295.1_ASM105429v1	26230489	128_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.68653	57	-	LEVN01	5	5828	5538	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280245	GCA_001031175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/175/GCA_001031175.1_Kleb_pneu_CHS102_V1	-	CHS102
Vibrio parahaemolyticus	670	PRJNA275536	275536	Proteobacteria	Gammaproteobacteria	5.19424	45.2	-	LASI01	80	5065	4798	4/15/15	3/26/17	Contig	Health Canada	SAMN03452292	GCA_000972125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/125/GCA_000972125.1_ASM97212v1	-	Sep-34
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.20903	28.4	-	MPFH01	132	3952	3783	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710942	GCA_002302795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/795/GCA_002302795.1_ASM230279v1	-	7474-AL/ST58
Vibrio cholerae	666	PRJNA339415	339415	Proteobacteria	Gammaproteobacteria	3.97228	47.5	-	MIPC01	148	3807	3670	10/14/16	3/28/17	Contig	Georgia Institute of Technology	SAMN05590417	GCA_001857325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/325/GCA_001857325.1_ASM185732v1	-	1496-86
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.1342	68.2	-	LWZL01	186	7422	6807	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208679	GCA_001978705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/705/GCA_001978705.1_ASM197870v1	-	NAU20B-2
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.6524	50.7	-	CXAO01	443	5180	4420	7/16/15	2/24/17	Scaffold	SC	SAMEA2445685	GCA_001251755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/755/GCA_001251755.1_12971_8_9	-	H081700339
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.54066	38.3	-	FJHW01	65	3238	3090	2/20/16	3/27/17	Contig	SC	SAMEA2064384	GCA_900062525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/525/GCA_900062525.1_10208_4_73	-	2531STDY5467450
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.03691	41.2	-	FIMM01	21	2047	1942	2/10/16	3/19/17	Contig	SC	SAMEA1566132	GCA_900049115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/115/GCA_900049115.1_8337_6_8	-	BM211a
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.12439	35.4	-	LDAK01	25	2177	2050	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435116	GCA_001016435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/435/GCA_001016435.1_ASM101643v1	25946017	SH2515
Acinetobacter baumannii UH18608	1398961	PRJNA218762	218762	Proteobacteria	Gammaproteobacteria	3.91583	39	-	AYGA01	86	3785	3639	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597405	GCA_000515775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/775/GCA_000515775.1_gabuh18608_v01	24449752	UH18608
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.87026	66	-	JTXT01	108	6546	6346	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105464	GCA_000794485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/485/GCA_000794485.1_AZPAE14566	25367914	AZPAE14566
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15061	51.6	-	FEQZ01	74	2500	2164	2/9/16	3/19/17	Contig	SC	SAMEA2673851	GCA_900038035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/035/GCA_900038035.1_14355_4_27	-	2842STDY5880984
Helicobacter pylori SA214A	1345594	PRJEB4105	216062	Proteobacteria	delta/epsilon subdivisions	1.6312	39.1	-	CBOE01	55	1597	1423	9/21/13	3/24/17	Contig	MHH	SAMEA2271979	GCA_000476195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/195/GCA_000476195.1_SA214A	23898187	SA214A
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.14397	39.5	-	CLJP01	80	2377	2123	3/21/15	3/6/17	Contig	SC	SAMEA1029152	GCA_001089705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/705/GCA_001089705.1_6925_8_12	-	SMRU2532
Ureaplasma parvum	134821	PRJNA390580	390580	Terrabacteria group	Tenericutes	0.732889	25.4	chromosome:NZ_CP021987.1/CP021987.1	-	1	622	564	6/22/17	6/24/17	Complete Genome	HeBei North University	SAMN07244538	GCA_002205515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/515/GCA_002205515.1_ASM220551v1	-	hebnu3h04
Mycobacterium tuberculosis TKK_04_0070	1448474	PRJNA235479	235479	Terrabacteria group	Actinobacteria	4.39469	65.6	-	JJXR01	3	4272	4099	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585969	GCA_000652615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/615/GCA_000652615.1_Myco_tube_TKK_04_0070_V1	-	TKK_04_0070
Staphylococcus epidermidis	1282	PRJNA308053	308053	Terrabacteria group	Firmicutes	2.51166	32	-	LQRB01	48	2462	2286	1/15/16	3/27/17	Scaffold	Seoul National University of Science and Technology	SAMN04386398	GCA_001516785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/785/GCA_001516785.1_ASM151678v1	26941142	SNUT
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.2563	35.2	-	NHYG01	206	5776	5417	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163331	GCA_002199675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/675/GCA_002199675.1_ASM219967v1	-	MOD1_Bc215
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.05615	37.8	-	JPBO01	30	3120	3018	7/15/14	2/26/17	Contig	Cornell University	SAMN02741601	GCA_000728855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/855/GCA_000728855.1_ASM72885v1	-	FSL R8-7478
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64137	30.5	-	CUQU01	14	1706	1616	3/31/15	3/18/17	Contig	SC	SAMEA1010601	GCA_001231385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/385/GCA_001231385.1_7092_1_54	-	OXC6501
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20111514	1412539	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007324.2/CP007324.2	-	1	4712	4449	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384260	GCA_000624295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/295/GCA_000624295.2_ASM62429v2	24786953	EC20111514
Staphylococcus aureus M1291	1158484	PRJNA88771	88771	Terrabacteria group	Firmicutes	2.869	32.9	-	AIZD01	10	2985	2820	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809077	GCA_000363265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/265/GCA_000363265.1_Stap_aure_M1291_V1	-	M1291
Staphylococcus aureus M1309	1169274	PRJNA158797	158797	Terrabacteria group	Firmicutes	2.89707	32.8	-	AOBG01	9	3052	2882	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00839759	GCA_000363285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/285/GCA_000363285.1_Stap_aure_M1309_V1	-	M1309
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20111515	1412538	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007325.2/CP007325.2	-	1	4708	4445	4/1/14	3/2/17	Chromosome	LFZ	SAMN02384259	GCA_000624315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/315/GCA_000624315.2_ASM62431v2	24786953	EC20111515
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.71039	30.4	-	CUKU01	17	1796	1708	3/31/15	3/18/17	Contig	SC	SAMEA1010536	GCA_001231425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/425/GCA_001231425.1_7038_3_85	-	OXC6335
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	2.94888	37.9	-	JPBI01	17	2995	2910	7/15/14	2/26/17	Contig	Cornell University	SAMN02741595	GCA_000728885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/885/GCA_000728885.1_ASM72888v1	-	FSL R8-7389
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.19029	35.4	-	NHTX01	87	5611	5279	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163330	GCA_002199695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/695/GCA_002199695.1_ASM219969v1	-	MOD1_Bc56
Staphylococcus epidermidis	1282	PRJNA374795	374795	Terrabacteria group	Firmicutes	2.54608	31.9	-	MVFV01	53	2529	2369	5/22/17	5/24/17	Scaffold	Aarhus University	SAMN06335551	GCA_002156425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/425/GCA_002156425.1_ASM215642v1	-	B45679-10
Mycobacterium tuberculosis TKK_04_0071	1448475	PRJNA235480	235480	Terrabacteria group	Actinobacteria	4.40047	65.6	-	JJXQ01	4	4272	4107	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585970	GCA_000652635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/635/GCA_000652635.1_Myco_tube_TKK_04_0071_V1	-	TKK_04_0071
Ureaplasma parvum	134821	PRJNA390580	390580	Terrabacteria group	Tenericutes	0.722452	25.4	chromosome:NZ_CP021988.1/CP021988.1	-	1	618	553	6/22/17	6/24/17	Complete Genome	HeBei North University	SAMN07245421	GCA_002205535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/535/GCA_002205535.1_ASM220553v1	-	hebnu3h05
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05206	39.6	-	CNNX02	132	2245	2031	3/23/15	3/11/17	Contig	SC	SAMEA1032477	GCA_001089725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/725/GCA_001089725.2_6925_1_69	-	R34-3051
Helicobacter pylori SA175C	1345587	PRJEB4098	216056	Proteobacteria	delta/epsilon subdivisions	1.61791	38.5	-	CBOI01	26	1564	1418	9/21/13	3/24/17	Contig	MHH	SAMEA2272687	GCA_000476215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/215/GCA_000476215.1_SA175C	23898187	SA175C
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.183	51.5	-	FEPK01	85	2540	2172	2/9/16	3/21/17	Contig	SC	SAMEA2673805	GCA_900039415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/415/GCA_900039415.1_14355_4_12	-	2842STDY5880969
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.00771	66.1	-	JTXQ01	149	6821	6527	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105467	GCA_000794505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/505/GCA_000794505.1_AZPAE14688	25367914	AZPAE14688
Acinetobacter baumannii UH19608	1398962	PRJNA218763	218763	Proteobacteria	Gammaproteobacteria	4.07402	38.9879	plasmid pABUH2a-5.6:NZ_AYFZ01000080.1/AYFZ01000080.2; plasmid pABUH3b-7.8:NZ_AYFZ01000083.1/AYFZ01000083.1	AYFZ01	225	3938	3728	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597404	GCA_000515795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/795/GCA_000515795.2_gabuh19608_v01	24449752	UH19608
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.20203	35.4	-	LDAN01	41	2289	2138	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435119	GCA_001016445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/445/GCA_001016445.1_ASM101644v1	25946017	SH3601
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04924	41.1	-	FIMS01	28	2060	1955	2/10/16	3/19/17	Contig	SC	SAMEA1566125	GCA_900049125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/125/GCA_900049125.1_8337_6_12	-	BM228C
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54011	38.3	-	FJHX01	63	3236	3087	2/20/16	3/27/17	Contig	SC	SAMEA2077754	GCA_900062535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/535/GCA_900062535.1_10625_3_6	-	2532STDY5467575
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.72692	50.7	-	CWZG01	395	5283	4566	7/16/15	2/24/17	Scaffold	SC	SAMEA2445751	GCA_001251795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/795/GCA_001251795.1_12971_8_60	-	H132860550
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.12906	68.2	-	LWZN01	141	7400	6824	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208681	GCA_001978725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/725/GCA_001978725.1_ASM197872v1	-	NAU20B-8
Vibrio cholerae	666	PRJNA339415	339415	Proteobacteria	Gammaproteobacteria	3.94756	47.7	-	MIPE01	162	3773	3597	10/14/16	3/28/17	Contig	Georgia Institute of Technology	SAMN05590419	GCA_001857345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/345/GCA_001857345.1_ASM185734v1	-	2523-87
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.14874	28.6	-	MPFI01	92	3846	3694	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710943	GCA_002302805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/805/GCA_002302805.1_ASM230280v1	-	7476-Y/ST2
Vibrio parahaemolyticus	670	PRJNA275536	275536	Proteobacteria	Gammaproteobacteria	5.20457	45.2	-	LASH01	89	5083	4807	4/15/15	3/26/17	Contig	Health Canada	SAMN03452291	GCA_000974905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/905/GCA_000974905.1_ASM97490v1	-	Sep-18
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.82539	57	-	LEVO01	5	5915	5641	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280247	GCA_001031185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/185/GCA_001031185.1_Kleb_pneu_CHS104_V1	-	CHS104
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.13653	37.2	-	JVTP01	186	3245	3068	7/10/15	3/26/17	Contig	University of Washington	SAMN03197305	GCA_001054355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/355/GCA_001054355.1_ASM105435v1	26230489	1325_EFLS
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14127	52.4	-	CQMY01	78	2509	2184	3/23/15	4/11/17	Scaffold	SC	SAMEA1690482	GCA_001103645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/645/GCA_001103645.1_8289_2_45	-	GCGS045
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.24612	37.7	-	LNMG01	144	3488	3113	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270952	GCA_001547175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/175/GCA_001547175.1_ASM154717v1	-	VRE-1402563
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.66721	67.5	-	CSOH01	1172	3741	2923	3/22/15	3/26/17	Scaffold	SC	SAMEA751241	GCA_001194095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/095/GCA_001194095.1_5601_3_1	-	B323
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65862	31.4	-	FBON01	13	1710	1620	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683408	GCA_001491335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/335/GCA_001491335.1_H093580323	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.75428	55.6	-	FKIQ01	24	4605	4401	4/11/16	3/28/17	Scaffold	SC	SAMEA2273441	GCA_900076435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/435/GCA_900076435.1_12045_5_19	-	e2129
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.55908	63.9	-	FSHL01	33	5753	5542	12/14/16	4/2/17	Contig	SC	SAMEA2070300	GCA_900135575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/575/GCA_900135575.1_10625_5_16	-	101
Pseudomonas sp. B2(2017)	1981728	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.25325	64.7	-	NEJF01	62	5593	5450	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771346	GCA_002113685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/685/GCA_002113685.1_ASM211368v1	-	B2(2017)
Streptomyces sp. CB00455	1703927	PRJNA293172	293172	Terrabacteria group	Actinobacteria	7.56194	72.3	-	LIVQ01	21	6782	6379	12/15/16	3/15/17	Scaffold	The Scripps Research Institute	SAMN03999376	GCA_001905445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/445/GCA_001905445.1_ASM190544v1	27999165	CB00455
Streptomyces sp. TSRI0261	1703931	PRJNA293172	293172	Terrabacteria group	Actinobacteria	8.66823	71.6	-	LISY01	18	7481	7153	12/15/16	3/15/17	Scaffold	The Scripps Research Institute	SAMN03999380	GCA_001905485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/485/GCA_001905485.1_ASM190548v1	27999165	TSRI0261
Pseudomonas sp. B23(2017)	1981735	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	5.93703	63.4	-	NEJM01	52	5482	5285	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771339	GCA_002113725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/725/GCA_002113725.1_ASM211372v1	-	B23(2017)
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.55942	63.9	-	FSHJ01	28	5755	5538	12/14/16	3/21/17	Contig	SC	SAMEA2071232	GCA_900135585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/585/GCA_900135585.1_10625_5_15	-	100
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.81921	55.4	-	FKCX01	58	4742	4522	4/6/16	3/28/17	Scaffold	SC	SAMEA2273442	GCA_900076445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/445/GCA_900076445.1_12045_5_20	-	e2140
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.70092	31.3	-	FBKR01	20	1785	1689	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683344	GCA_001491355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/355/GCA_001491355.1_p546D	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.81025	67.9	-	CSOD01	280	3673	3296	3/22/15	3/26/17	Scaffold	SC	SAMEA751489	GCA_001194225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/225/GCA_001194225.1_5515_6_12	-	B135
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.13645	37.8	-	LNMH01	151	3345	3019	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270953	GCA_001547185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/185/GCA_001547185.1_ASM154718v1	-	VRE-1402601
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.09509	52.6	-	CQNZ01	74	2459	2116	3/22/15	4/11/17	Scaffold	SC	SAMEA1690362	GCA_001103805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/805/GCA_001103805.1_8289_2_84	-	GCGS084
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.96039	37.4	-	JVQP01	58	2990	2875	7/10/15	3/26/17	Contig	University of Washington	SAMN03197383	GCA_001054545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/545/GCA_001054545.1_ASM105454v1	26230489	191_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.85867	56.9	-	LEVP01	6	5948	5672	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280248	GCA_001031225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/225/GCA_001031225.1_Kleb_pneu_CHS105_V1	-	CHS105
Vibrio parahaemolyticus	670	PRJNA281143	281143	Proteobacteria	Gammaproteobacteria	4.98843	53.4	-	LBDB01	180	4904	4663	4/23/15	3/26/17	Contig	University of Malaya	SAMN03486935	GCA_000978665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/978/665/GCA_000978665.1_ASM97866v1	-	Vp103
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.25478	28.7	-	MPFJ01	302	3831	3665	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710944	GCA_002302835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/835/GCA_002302835.1_ASM230283v1	-	7477-A/ST43
Vibrio cholerae	666	PRJNA339415	339415	Proteobacteria	Gammaproteobacteria	3.96997	47.6	-	MIPD01	135	3796	3652	10/14/16	3/28/17	Contig	Georgia Institute of Technology	SAMN05590418	GCA_001857355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/355/GCA_001857355.1_ASM185735v1	-	2497-86
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.23021	68.1	-	LWZP01	150	7457	6883	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208683	GCA_001978745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/745/GCA_001978745.1_ASM197874v1	-	NAU21B-4
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.71845	50.7	-	CXMM01	396	5328	4550	7/16/15	2/24/17	Scaffold	SC	SAMEA2057987	GCA_001251815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/815/GCA_001251815.1_9870_6_15	-	143269
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.5435	38.3	-	FJHZ01	68	3248	3091	2/20/16	3/27/17	Contig	SC	SAMEA1969030	GCA_900062545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/545/GCA_900062545.1_10625_3_22	-	2532STDY5467591
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04105	41.2	-	FINA01	22	2036	1940	2/10/16	3/19/17	Contig	SC	SAMEA1566123	GCA_900049135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/135/GCA_900049135.1_8337_6_22	-	BM303a
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.10113	35.3	-	LCXA01	24	2171	2055	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435065	GCA_001016465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/465/GCA_001016465.1_ASM101646v1	25946017	GB-PW-081
Acinetobacter baumannii UH19908	1398963	PRJNA218764	218764	Proteobacteria	Gammaproteobacteria	4.2	39	-	AYFY01	88	4124	3961	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597403	GCA_000515815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/815/GCA_000515815.1_gabuh19908_v01	24449752	UH19908
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.99596	65.9	-	JTXR01	147	6729	6469	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105466	GCA_000794515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/515/GCA_000794515.1_AZPAE14687	25367914	AZPAE14687
Neisseria meningitidis 61106	1145130	PRJNA83473	83473	Proteobacteria	Betaproteobacteria	2.24327	51.8	-	APSQ01	147	2592	2184	5/1/13	3/21/17	Scaffold	IGS	SAMN01780080	GCA_000386285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/386/285/GCA_000386285.2_ASM38628v2	-	61106
Helicobacter pylori SA253A	1345538	PRJEB4127	216004	Proteobacteria	delta/epsilon subdivisions	1.64749	38.5	-	CBOJ01	57	1620	1286	9/21/13	4/10/17	Contig	MHH	SAMEA2272306	GCA_000476235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/235/GCA_000476235.1_SA253A	23898187	SA253A
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.05943	39.7	-	CMLC01	38	2270	2035	3/22/15	3/4/17	Contig	SC	SAMEA1029270	GCA_001089785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/785/GCA_001089785.1_7054_5_18	-	SMRU3066
Ureaplasma parvum	134821	PRJNA390580	390580	Terrabacteria group	Tenericutes	0.737737	25.4	chromosome:NZ_CP021990.1/CP021990.1	-	1	624	547	6/22/17	6/24/17	Complete Genome	HeBei North University	SAMN07246859	GCA_002205595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/595/GCA_002205595.1_ASM220559v1	-	hebnu1229
Mycobacterium tuberculosis TKK_04_0072	1448476	PRJNA235481	235481	Terrabacteria group	Actinobacteria	4.40798	65.6	-	JJXP01	5	4281	4122	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585971	GCA_000652655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/655/GCA_000652655.1_Myco_tube_TKK_04_0072_V1	-	TKK_04_0072
Staphylococcus epidermidis	1282	PRJEB17321	351510	Terrabacteria group	Firmicutes	2.47444	31.9	-	FOPD01	30	2453	2288	10/31/16	3/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487862	GCA_900113395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/395/GCA_900113395.1_IMG-taxon_2623620480_annotated_assembly	-	NLAE-zl-G239
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.18674	35.3	-	NHTZ01	274	5620	5261	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163328	GCA_002199705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/705/GCA_002199705.1_ASM219970v1	-	MOD1_Bc58
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.05211	37.9	-	JPBN01	98	3087	2992	7/15/14	2/26/17	Contig	Cornell University	SAMN02741600	GCA_000728905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/905/GCA_000728905.1_ASM72890v1	-	FSL R8-7474
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.65516	30.4	-	CULQ01	18	1746	1634	3/31/15	3/18/17	Contig	SC	SAMEA1010525	GCA_001231505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/505/GCA_001231505.1_7065_7_2	-	OXC6348
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20111554	1412567	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007326.2/CP007326.2	-	1	4708	4446	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384288	GCA_000624335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/335/GCA_000624335.2_ASM62433v2	24786953	EC20111554
Staphylococcus aureus M1311	1158485	PRJNA88773	88773	Terrabacteria group	Firmicutes	2.83176	32.9	-	AIZE01	7	2940	2753	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809078	GCA_000363305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/305/GCA_000363305.1_Stap_aure_M1311_V1	-	M1311
Staphylococcus aureus M1320	1158486	PRJNA88775	88775	Terrabacteria group	Firmicutes	2.84215	32.9	-	AIZF01	4	2981	2825	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809079	GCA_000363325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/325/GCA_000363325.1_Stap_aure_M1320_V1	-	M1320
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20111561	1412572	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007327.2/CP007327.2	-	1	4710	4451	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384293	GCA_000624355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/355/GCA_000624355.2_ASM62435v2	24786953	EC20111561
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64337	30.3	-	CUND01	11	1717	1595	3/31/15	3/18/17	Contig	SC	SAMEA1010487	GCA_001231585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/585/GCA_001231585.1_7065_7_53	-	OXC6401
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09007	37.9	-	JPBU01	38	3137	3036	7/15/14	2/26/17	Contig	Cornell University	SAMN02741607	GCA_000728925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/925/GCA_000728925.1_ASM72892v1	-	FSL R8-7571
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	4.93997	35.4	-	NHUF01	112	5392	5041	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163322	GCA_002199745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/745/GCA_002199745.1_ASM219974v1	-	MOD1_Bc64
Staphylococcus epidermidis	1282	PRJEB19953	379793	Terrabacteria group	Firmicutes	2.58675	31.9	-	FWCG01	51	2612	2431	3/19/17	3/24/17	Scaffold	IRCCS istituto ortopedico Galeazzi	SAMEA103910387	GCA_900169475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/475/GCA_900169475.1_ID412_assemblyCLC	-	-
Mycobacterium tuberculosis TKK_04_0075	1448477	PRJNA235482	235482	Terrabacteria group	Actinobacteria	4.43398	65.5	-	JJXO01	4	4300	4128	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585972	GCA_000652675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/675/GCA_000652675.1_Myco_tube_TKK_04_0075_V1	-	TKK_04_0075
Ureaplasma parvum	134821	PRJNA390580	390580	Terrabacteria group	Tenericutes	0.723292	25.4	chromosome:CP021989.1	-	1	620	482	6/22/17	6/22/17	Complete Genome	HeBei North University	SAMN07246705	GCA_002205575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/575/GCA_002205575.1_ASM220557v1	-	hebnu3h07
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0733	39.7	-	CNOD02	172	2222	2023	3/22/15	3/11/17	Contig	SC	SAMEA1032719	GCA_001089825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/825/GCA_001089825.2_6925_2_77	-	R34-3058
Helicobacter pylori SA166A	1345572	PRJEB4083	216041	Proteobacteria	delta/epsilon subdivisions	1.59909	38.6	-	CBPA01	48	1572	1345	9/21/13	4/10/17	Contig	MHH	SAMEA2272140	GCA_000476255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/255/GCA_000476255.1_SA166A	23898187	SA166A
Neisseria meningitidis NM271	1145182	PRJNA83577	83577	Proteobacteria	Betaproteobacteria	2.18201	51.7	-	APUQ01	139	2538	2099	5/1/13	3/21/17	Scaffold	IGS	SAMN01780132	GCA_000387165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/165/GCA_000387165.2_ASM38716v2	-	NM271
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.25289	65.6	-	JTXP01	216	7095	6805	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105468	GCA_000794545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/545/GCA_000794545.1_AZPAE14689	25367914	AZPAE14689
Acinetobacter baumannii UH20108	1398964	PRJNA218765	218765	Proteobacteria	Gammaproteobacteria	3.8802	38.9	-	AYFX01	92	3749	3605	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597402	GCA_000515835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/835/GCA_000515835.1_gabuh20108_v01	24449752	UH20108
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.06311	35.5	-	LCVZ01	34	2125	1985	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435059	GCA_001016495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/495/GCA_001016495.1_ASM101649v1	25946017	GB-PW-035
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04907	41.2	-	FINB01	21	2061	1956	2/10/16	3/19/17	Contig	SC	SAMEA1566192	GCA_900049145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/145/GCA_900049145.1_8337_6_24	-	BM315C
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.53968	38.3	-	FJIB01	58	3234	3086	2/20/16	3/27/17	Contig	SC	SAMEA2077755	GCA_900062555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/555/GCA_900062555.1_10625_3_9	-	2532STDY5467578
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.42274	50.8	-	CXEA01	354	4716	4213	7/16/15	2/24/17	Scaffold	SC	SAMEA954620	GCA_001251855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/855/GCA_001251855.1_5417_2_1	-	20061309_1361392
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.22698	68.1	-	LWZO01	148	7452	6871	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208682	GCA_001978765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/765/GCA_001978765.1_ASM197876v1	-	NAU21B-3
Vibrio cholerae	666	PRJNA339415	339415	Proteobacteria	Gammaproteobacteria	4.00204	47.7	-	MIPF01	165	3803	3622	10/14/16	3/28/17	Contig	Georgia Institute of Technology	SAMN05590421	GCA_001857365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/365/GCA_001857365.1_ASM185736v1	-	3225-74
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.07163	28.7	-	MPGC01	408	3804	3598	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710945	GCA_002302845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/845/GCA_002302845.1_ASM230284v1	-	7478-NonSp/novelST
Vibrio parahaemolyticus	670	PRJNA275536	275536	Proteobacteria	Gammaproteobacteria	5.21763	45.2	-	JYJV01	146	5087	4815	5/12/15	3/26/17	Contig	Health Canada	SAMN03349612	GCA_001006205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/205/GCA_001006205.1_ASM100620v1	-	Oct-05
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.83651	57	-	LEVQ01	10	5907	5627	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280249	GCA_001031235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/235/GCA_001031235.1_Kleb_pneu_CHS106_V1	-	CHS106
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.25221	37.2	-	JVKC01	96	3348	3164	7/10/15	3/26/17	Contig	University of Washington	SAMN03197552	GCA_001054975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/975/GCA_001054975.1_ASM105497v1	26230489	361_EFLS
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.1517	52.4	-	CQKR01	79	2518	2197	3/22/15	4/11/17	Scaffold	SC	SAMEA1690470	GCA_001103925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/925/GCA_001103925.1_8727_8_82	-	GCGS178
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.03395	38	-	LNLW01	335	3231	2896	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270942	GCA_001547195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/195/GCA_001547195.1_ASM154719v1	-	VRE-1401878
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.80257	67.9	-	CSRA01	274	3638	3278	3/22/15	3/26/17	Scaffold	SC	SAMEA751448	GCA_001194565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/565/GCA_001194565.1_5515_6_6	-	B128
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.72677	31.2	-	FBQJ01	80	1769	1654	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683491	GCA_001491375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/375/GCA_001491375.1_H105160209	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.94617	55.4	-	FKBQ01	36	4835	4633	4/6/16	3/28/17	Scaffold	SC	SAMEA2273440	GCA_900076455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/455/GCA_900076455.1_12045_5_18	-	e2127
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.55881	63.9	-	FSHN01	33	5755	5541	12/14/16	3/21/17	Contig	SC	SAMEA2070712	GCA_900135595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/595/GCA_900135595.1_10625_5_17	-	102
Pseudomonas sp. B17(2017)	1981742	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	6.13592	60.5	-	NEJT01	35	5630	5480	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771332	GCA_002113765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/765/GCA_002113765.1_ASM211376v1	-	B17(2017)
Streptomyces sp. CB02058	1703921	PRJNA293172	293172	Terrabacteria group	Actinobacteria	8.30821	71.2	-	LIPG01	14	7284	7035	12/15/16	3/14/17	Scaffold	The Scripps Research Institute	SAMN03999370	GCA_001905505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/505/GCA_001905505.1_ASM190550v1	27999165	CB02058
Streptomyces sp. TSRI0395	1703923	PRJNA293172	293172	Terrabacteria group	Actinobacteria	8.65855	71.7	-	LIPE01	10	7593	7343	12/15/16	3/14/17	Scaffold	The Scripps Research Institute	SAMN03999372	GCA_001905525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/525/GCA_001905525.1_ASM190552v1	27999165	TSRI0395
Pseudomonas sp. B12(2017)	1981747	PRJNA383709	383709	Proteobacteria	Gammaproteobacteria	5.95156	63.5	-	NEJW01	66	5461	5266	4/27/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06771327	GCA_002113785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/785/GCA_002113785.1_ASM211378v1	-	B12(2017)
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.12676	64.1	-	FSHO01	17	5143	5029	12/14/16	3/21/17	Contig	SC	SAMEA2071233	GCA_900135615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/615/GCA_900135615.1_10625_5_18	-	103
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.03785	55	-	FKCD01	55	4937	4692	4/6/16	3/28/17	Scaffold	SC	SAMEA2273510	GCA_900076465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/465/GCA_900076465.1_12045_5_81	-	e2144
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.71037	31.2	-	FBOM01	18	1755	1641	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683444	GCA_001491395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/395/GCA_001491395.1_H094560717	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.67474	67.4	-	CSOR01	883	3726	2912	3/22/15	3/26/17	Scaffold	SC	SAMEA2015291	GCA_001194605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/605/GCA_001194605.1_5463_3_3	-	B199
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.14563	37.8	-	LNML01	241	3369	3025	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270957	GCA_001547235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/235/GCA_001547235.1_ASM154723v1	-	VRE-1403355
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.17718	52.3	-	CQMJ01	88	2555	2233	3/23/15	4/11/17	Scaffold	SC	SAMEA1690315	GCA_001106145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/145/GCA_001106145.1_8289_2_86	-	GCGS086
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.97395	37.3	-	JVCH01	127	2955	2831	7/10/15	3/26/17	Contig	University of Washington	SAMN03197755	GCA_001055355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/355/GCA_001055355.1_ASM105535v1	26230489	556_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.49949	57.2	-	LEVR01	12	5501	5265	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280250	GCA_001031245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/245/GCA_001031245.1_Kleb_pneu_CHS107_V1	-	CHS107
Vibrio parahaemolyticus	670	PRJNA281142	281142	Proteobacteria	Gammaproteobacteria	4.98202	53.4	-	LCUL01	160	4901	4653	5/13/15	3/26/17	Contig	University of Malaya	SAMN03486857	GCA_001006405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/405/GCA_001006405.1_ASM100640v1	-	Vp152
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.34912	29.5	-	MPFK01	410	4047	3833	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710946	GCA_002302865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/865/GCA_002302865.1_ASM230286v1	-	7479-NonSp/ST3
Vibrio cholerae	666	PRJNA339415	339415	Proteobacteria	Gammaproteobacteria	3.96782	47.7	-	MIPG01	146	3772	3584	10/14/16	3/28/17	Contig	Georgia Institute of Technology	SAMN05590422	GCA_001857405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/405/GCA_001857405.1_ASM185740v1	-	1074-78
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.26204	68.1	-	LWZQ01	143	7508	6893	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208684	GCA_001978785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/785/GCA_001978785.1_ASM197878v1	-	NAU21B-7
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.87354	50.7	-	CWVU01	405	5528	4692	7/16/15	2/24/17	Scaffold	SC	SAMEA3345086	GCA_001251915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/915/GCA_001251915.1_Sg_201401742_GTTTCG_L001	-	201401742_1
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54223	38.3	-	FJIC01	60	3235	3092	2/20/16	3/27/17	Contig	SC	SAMEA2077756	GCA_900062565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/565/GCA_900062565.1_10625_3_12	-	2532STDY5467581
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.07115	41.2	-	FIQX01	25	2092	1985	2/10/16	3/19/17	Contig	SC	SAMEA1566148	GCA_900049155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/155/GCA_900049155.1_8525_5_63	-	SS99
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.03801	35.2	-	LCVX01	22	2088	1979	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435057	GCA_001016515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/515/GCA_001016515.1_ASM101651v1	25946017	GB-PW-013
Acinetobacter baumannii UH22908	1398966	PRJNA218767	218767	Proteobacteria	Gammaproteobacteria	4.03143	39	-	AYFV01	128	3868	3681	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597400	GCA_000515855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/855/GCA_000515855.1_gabuh22908_v01	24449752	UH22908
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.73056	66.1	-	JTXO01	106	6385	6194	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105469	GCA_000794555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/555/GCA_000794555.1_AZPAE14690	25367914	AZPAE14690
Neisseria meningitidis	487	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	2.23362	49.2	-	JWEY01	84	2190	2079	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197010	GCA_001060175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/175/GCA_001060175.1_ASM106017v1	26230489	1044_NMEN
Helicobacter pylori SA213A	1345592	PRJEB4103	216060	Proteobacteria	delta/epsilon subdivisions	1.62589	38.8	-	CBOM01	86	1597	1435	9/21/13	3/24/17	Contig	MHH	SAMEA2272778	GCA_000476275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/275/GCA_000476275.1_SA213A	23898187	SA213A
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0719	39.6	-	COAV02	280	2182	1982	3/22/15	3/11/17	Contig	SC	SAMEA1463188	GCA_001089845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/845/GCA_001089845.2_7622_2_23	-	BR1074
Spiroplasma corruscae	216934	PRJNA253645	253645	Terrabacteria group	Tenericutes	1.20464	25.3636	chromosome:NZ_CP022535.1/CP022535.1; plasmid unnamed:NZ_CP022536.1/CP022536.1	-	2	1071	1032	7/31/17	8/3/17	Complete Genome	Academia Sinica	SAMN07267299	GCA_002237575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/575/GCA_002237575.1_ASM223757v1	-	EC-1
Mycobacterium tuberculosis TKK_04_0078	1448478	PRJNA235483	235483	Terrabacteria group	Actinobacteria	4.40344	65.6	-	JJXN01	1	4277	4113	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585973	GCA_000652695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/695/GCA_000652695.1_Myco_tube_TKK_04_0078_V1	-	TKK_04_0078
Staphylococcus epidermidis	1282	PRJNA274731	274731	Terrabacteria group	Firmicutes	2.33987	32	chromosome:CP010942.1	-	1	2221	2119	2/24/15	8/5/15	Chromosome	University of Pretoria	SAMN03339004	GCA_000934225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/225/GCA_000934225.1_ASM93422v1	-	949_S8
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.19258	35.3	-	NHUB01	58	5598	5299	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163326	GCA_002199755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/755/GCA_002199755.1_ASM219975v1	-	MOD1_Bc60
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.11611	37.8	-	JPBV01	115	3219	3106	7/15/14	2/26/17	Contig	Cornell University	SAMN02741608	GCA_000728935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/935/GCA_000728935.1_ASM72893v1	-	FSL R8-7585
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.6934	30.4	-	CUMK01	28	1800	1697	3/31/15	3/18/17	Contig	SC	SAMEA1010459	GCA_001231605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/605/GCA_001231605.1_7065_7_36	-	OXC6382
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20111576	1412535	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007328.2/CP007328.2	-	1	4708	4444	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384256	GCA_000624375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/375/GCA_000624375.2_ASM62437v2	24786953	EC20111576
Staphylococcus aureus M1321	1158487	PRJNA88777	88777	Terrabacteria group	Firmicutes	2.95175	32.9	-	AIZG01	14	3109	2952	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809080	GCA_000363345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/345/GCA_000363345.1_Stap_aure_M1321_V1	-	M1321
Staphylococcus aureus M1322	1158488	PRJNA88779	88779	Terrabacteria group	Firmicutes	2.85299	32.8	-	AIZH01	4	2976	2822	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809081	GCA_000363365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/365/GCA_000363365.1_Stap_aure_M1322_V1	-	M1322
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120003	1412467	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68597	52.2	chromosome:NZ_CP007330.2/CP007330.2	-	1	4708	4451	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384188	GCA_000624415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/415/GCA_000624415.2_ASM62441v2	24786953	EC20120003
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70101	30.4	-	CUJU01	19	1822	1681	3/31/15	3/18/17	Contig	SC	SAMEA1010650	GCA_001231625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/625/GCA_001231625.1_7038_3_61	-	OXC6311
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.10509	37.8	-	JPBW01	28	3200	3090	7/15/14	2/26/17	Contig	Cornell University	SAMN02741609	GCA_000728945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/945/GCA_000728945.1_ASM72894v1	-	FSL R8-7591
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.19155	35.4	-	NHUI01	118	5598	5294	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163319	GCA_002199765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/765/GCA_002199765.1_ASM219976v1	-	MOD1_Bc178
Staphylococcus epidermidis	1282	PRJNA274319	274319	Terrabacteria group	Firmicutes	2.64219	32.3	-	JXXM01	566	-	-	2/25/15	2/25/15	Scaffold	Northwest A&F University	SAMN03325915	GCA_000934335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/335/GCA_000934335.1_ASM93433v1	-	32A
Mycobacterium tuberculosis TKK_04_0079	1448479	PRJNA235484	235484	Terrabacteria group	Actinobacteria	4.41129	65.6	-	JJXM01	4	4285	4119	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585974	GCA_000652715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/715/GCA_000652715.1_Myco_tube_TKK_04_0079_V1	-	TKK_04_0079
Buchnera aphidicola str. Bp (Baizongia pistaciae)	224915	PRJNA256	256	Proteobacteria	Gammaproteobacteria	0.618379	25.3004	chromosome:NC_004545.1/AE016826.1; plasmid pBBp1:NC_004555.1/AF492591.1	-	2	560	520	1/27/03	3/14/17	Complete Genome	Valencia Univ.	SAMN02604289	GCA_000007725.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/725/GCA_000007725.1_ASM772v1	12522265	Bp (Baizongia pistaciae)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.1093	39.5	-	CNXM02	194	2272	2071	3/23/15	3/5/17	Contig	SC	SAMEA1032427	GCA_001089885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/885/GCA_001089885.2_7001_3_21	-	R34-3158
Helicobacter pylori SA47A	1345537	PRJEB4057	216078	Proteobacteria	delta/epsilon subdivisions	1.67077	38.4	-	CBOT01	43	1597	1424	9/21/13	3/24/17	Contig	MHH	SAMEA2272045	GCA_000476295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/295/GCA_000476295.1_SA47A	23898187	SA47A
Neisseria meningitidis	487	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	2.28166	49.4	-	JVYR01	84	2260	2145	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197173	GCA_001061215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/215/GCA_001061215.1_ASM106121v1	26230489	1210_NMEN
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.01117	65.9	-	JTXM01	123	6739	6497	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105471	GCA_000794585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/585/GCA_000794585.1_AZPAE14692	25367914	AZPAE14692
Acinetobacter baumannii UH8907	1398988	PRJNA218789	218789	Proteobacteria	Gammaproteobacteria	3.92902	38.9	-	AYEZ01	158	3822	3635	1/7/14	3/18/17	Contig	J. Craig Venter Institute	SAMN02597378	GCA_000515875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/875/GCA_000515875.2_gabuh8907_v01	24449752	UH8907
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.04758	35.2	-	LCVY01	25	2139	2010	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435058	GCA_001016525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/525/GCA_001016525.1_ASM101652v1	25946017	GB-PW-021
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.13199	41.1	-	FIRB01	25	2144	2040	2/10/16	3/19/17	Contig	SC	SAMEA1566200	GCA_900049165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/165/GCA_900049165.1_8525_5_67	-	VS2923
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54022	38.3	-	FJIE01	58	3235	3090	2/20/16	3/27/17	Contig	SC	SAMEA2080691	GCA_900062575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/575/GCA_900062575.1_10625_3_8	-	2532STDY5467577
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.75436	50.5	-	CXAZ01	414	5106	4547	7/16/15	2/24/17	Scaffold	SC	SAMEA954636	GCA_001251955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/955/GCA_001251955.1_5008_8_11	-	ShIB691_401087
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.19142	68.1	-	LWZR01	235	7479	6833	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208685	GCA_001978795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/795/GCA_001978795.1_ASM197879v1	-	NAU21B-11
Vibrio cholerae	666	PRJNA339415	339415	Proteobacteria	Gammaproteobacteria	3.90236	47.7	-	MIPH01	121	3680	3496	10/14/16	3/28/17	Contig	Georgia Institute of Technology	SAMN05590423	GCA_001857425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/425/GCA_001857425.1_ASM185742v1	-	2633-78
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.06366	28.5	-	MPFL01	223	3795	3639	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710947	GCA_002302885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/885/GCA_002302885.1_ASM230288v1	-	7480-M/ST15
Vibrio parahaemolyticus	670	PRJNA283337	283337	Proteobacteria	Gammaproteobacteria	4.95505	45.4	-	LCVL01	67	4716	4568	5/27/15	3/26/17	Contig	University of Copenhagen	SAMN03646983	GCA_001013435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/013/435/GCA_001013435.1_ASM101343v1	26139725	VH3
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.93663	56.9	-	LEVS01	9	6033	5749	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280252	GCA_001031265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/265/GCA_001031265.1_Kleb_pneu_CHS109_V1	-	CHS109
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.96736	37.4	-	JVQQ01	46	3012	2880	7/10/15	3/26/17	Contig	University of Washington	SAMN03197382	GCA_001055765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/765/GCA_001055765.1_ASM105576v1	26230489	190_EFLS
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.14541	52.4	-	CQNW01	64	2513	2183	3/23/15	4/11/17	Scaffold	SC	SAMEA1677308	GCA_001106765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/765/GCA_001106765.1_8727_5_59	-	GCGS209
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.10576	37.9	-	LNMP01	164	3300	2961	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270961	GCA_001547255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/255/GCA_001547255.1_ASM154725v1	-	VRE-1404669
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.65653	67.5	-	CSOI01	1011	3736	2920	3/23/15	3/26/17	Scaffold	SC	SAMEA751140	GCA_001194985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/985/GCA_001194985.1_5515_5_4	-	B117
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66066	31.4	-	FBPN01	23	1721	1626	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683470	GCA_001491415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/415/GCA_001491415.1_H091320788	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.08378	55	-	FKDF01	76	4986	4753	4/6/16	3/28/17	Scaffold	SC	SAMEA2273509	GCA_900076475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/475/GCA_900076475.1_12045_5_80	-	e2276
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.55889	63.9	-	FSHM01	30	5748	5536	12/14/16	3/21/17	Contig	SC	SAMEA2070301	GCA_900135625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/625/GCA_900135625.1_10625_5_19	-	104
Pseudomonas sp. SCPG-7	1961714	PRJNA375960	375960	Proteobacteria	Gammaproteobacteria	6.2562	60.1	-	MVOO01	60	5688	5538	5/22/17	5/24/17	Scaffold	Shihezi University	SAMN06348413	GCA_002156405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/405/GCA_002156405.1_ASM215640v1	-	SCPG-7
Streptomyces sp. CB02056	1703924	PRJNA293172	293172	Terrabacteria group	Actinobacteria	9.54351	73.7	-	LIPD01	34	8156	7869	12/15/16	3/15/17	Scaffold	The Scripps Research Institute	SAMN03999373	GCA_001905545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/545/GCA_001905545.1_ASM190554v1	27999165	CB02056
Streptomyces sp. CB00072	1703928	PRJNA293172	293172	Terrabacteria group	Actinobacteria	8.89038	71.4	-	LIPB01	15	7828	7502	12/15/16	3/15/17	Scaffold	The Scripps Research Institute	SAMN03999377	GCA_001905575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/575/GCA_001905575.1_ASM190557v1	27999165	CB00072
Pseudomonas sp. DrBHI1	2006091	PRJNA388670	388670	Proteobacteria	Gammaproteobacteria	5.65753	64.3	-	NIBE01	146	5285	4985	6/22/17	7/5/17	Scaffold	Oregon State University	SAMN07180877	GCA_002205115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/115/GCA_002205115.1_ASM220511v1	-	DrBHI1
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.2293	64.2	-	FSHP01	43	5245	5087	12/14/16	3/21/17	Contig	SC	SAMEA2150922	GCA_900135645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/645/GCA_900135645.1_10665_2_59	-	510
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.35312	55.2	-	FKDK01	67	5312	5071	4/6/16	4/20/17	Scaffold	SC	SAMEA2273443	GCA_900076485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/485/GCA_900076485.1_12045_5_21	-	e2161
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.78146	31.2	-	FBEH01	42	1871	1766	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683173	GCA_001491435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/435/GCA_001491435.1_SS_2352	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.76084	67.7	-	CSPW01	743	3786	3106	3/23/15	3/26/17	Scaffold	SC	SAMEA751320	GCA_001195245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/245/GCA_001195245.1_6062_2_7	-	B248
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.16382	37.7	-	LNMQ01	138	3373	3011	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270962	GCA_001547265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/265/GCA_001547265.1_ASM154726v1	-	VRE-1406033
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.09415	52.6	-	CQKW01	70	2449	2121	3/23/15	4/11/17	Scaffold	SC	SAMEA1690370	GCA_001112845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/845/GCA_001112845.1_8727_8_32	-	GCGS128
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.88711	37.5	-	JVOQ01	163	2924	2782	7/10/15	3/26/17	Contig	University of Washington	SAMN03197434	GCA_001056045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/045/GCA_001056045.1_ASM105604v1	26230489	244_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.97685	56.8	-	LEVT01	8	6075	5795	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280253	GCA_001031305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/305/GCA_001031305.1_Kleb_pneu_CHS110_V1	-	CHS110
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.11299	45.3	-	LBHD01	30	4961	4720	6/9/15	3/26/17	Contig	University of New Hampshire	SAMN03107383	GCA_001023055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/055/GCA_001023055.1_ASM102305v1	25832299	MAVP-26
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.2015	28.8	-	MPFM01	388	3918	3709	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710948	GCA_002302905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/905/GCA_002302905.1_ASM230290v1	-	7481-NonSp/ST59
Vibrio cholerae C6706	948564	PRJNA339415	339415	Proteobacteria	Gammaproteobacteria	4.01919	47.4	-	MIPI01	132	3838	3709	10/14/16	3/28/17	Contig	Georgia Institute of Technology	SAMN05590424	GCA_001857435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/435/GCA_001857435.1_ASM185743v1	-	C6706
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.1561	68.1	-	LWZS01	184	7458	6835	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208687	GCA_001978825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/825/GCA_001978825.1_ASM197882v1	-	NAU22A-3
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.7565	50.7	-	CXGX01	403	5383	4589	7/16/15	2/24/17	Scaffold	SC	SAMEA1324191	GCA_001251995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/995/GCA_001251995.1_7655_8_17	-	H113240269
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54286	38.3	-	FJIN01	72	3241	3088	2/20/16	3/27/17	Contig	SC	SAMEA2077779	GCA_900062585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/585/GCA_900062585.1_10625_2_73	-	2532STDY5467546
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.06704	41.2	-	FISN01	24	2071	1967	2/10/16	3/19/17	Contig	SC	SAMEA1566048	GCA_900049175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/175/GCA_900049175.1_8337_6_94	-	FX90_2
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.10364	35.5	-	LCUU01	34	2182	2007	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435035	GCA_001016545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/545/GCA_001016545.1_ASM101654v1	25946017	ES-NI-003
Acinetobacter baumannii UH2307	1398967	PRJNA218768	218768	Proteobacteria	Gammaproteobacteria	3.97377	39.1	-	AYFU01	104	3839	3702	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597399	GCA_000515895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/895/GCA_000515895.1_gabuh2307_v01	24449752	UH2307
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.30193	66.6	-	JTXN01	76	5946	5786	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105470	GCA_000794605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/605/GCA_000794605.1_AZPAE14691	25367914	AZPAE14691
Neisseria meningitidis	487	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	2.24698	49.2	-	JWEX01	81	2201	2080	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197011	GCA_001061795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/795/GCA_001061795.1_ASM106179v1	26230489	1045_NMEN
Helicobacter pylori SA144C	1345545	PRJEB4060	216011	Proteobacteria	delta/epsilon subdivisions	1.62864	38.5	-	CBOX01	30	1574	1324	9/21/13	4/10/17	Contig	MHH	SAMEA2271972	GCA_000476325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/325/GCA_000476325.1_SA144C	23898187	SA144C
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	1.99219	39.6	-	CLHN01	55	2177	1950	3/21/15	3/15/17	Contig	SC	SAMEA1026205	GCA_001089945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/945/GCA_001089945.1_6925_5_22	-	SMRU2182
Candidatus Evansia muelleri	1495769	PRJEB4944	257478	Proteobacteria	Gammaproteobacteria	0.357498	25.3	chromosome I:NZ_LM655252.1/LM655252.1	-	1	363	325	8/15/14	4/10/17	Complete Genome	ICBIBE	SAMEA2500319	GCA_000953435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/435/GCA_000953435.1_CEM1.1	-	-
Mycobacterium tuberculosis TKK_04_0080	1448480	PRJNA235485	235485	Terrabacteria group	Actinobacteria	4.4091	65.6	-	JJXL01	6	4268	4091	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585975	GCA_000652735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/735/GCA_000652735.1_Myco_tube_TKK_04_0080_V1	-	TKK_04_0080
Staphylococcus epidermidis 14.1.R1.SE	1000590	PRJNA64683	64683	Terrabacteria group	Firmicutes	2.55572	32.2	-	AGUC01	131	2608	2521	12/22/11	9/20/13	Contig	J. Craig Venter Institute	SAMN00761790	GCA_000239515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/515/GCA_000239515.2_ASM23951v2	-	14.1.R1.SE
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.14082	35.3	-	NHUL01	54	5551	5227	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163316	GCA_002199805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/805/GCA_002199805.1_ASM219980v1	-	MOD1_Bc181
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.10597	37.8	-	JPBX01	34	3200	3088	7/15/14	2/26/17	Contig	Cornell University	SAMN02741610	GCA_000728975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/728/975/GCA_000728975.1_ASM72897v1	-	FSL R8-7599
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.68176	30.3	-	CUQF01	18	1764	1644	3/31/15	3/18/17	Contig	SC	SAMEA1010662	GCA_001231685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/685/GCA_001231685.1_7092_1_4	-	OXC6450
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120007	1412469	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007331.2/CP007331.2	-	1	4707	4451	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384190	GCA_000624435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/435/GCA_000624435.2_ASM62443v2	24786953	EC20120007
Staphylococcus aureus M1359	1158489	PRJNA88781	88781	Terrabacteria group	Firmicutes	2.89258	33.2	-	AIZI01	3	2992	2822	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809082	GCA_000363385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/385/GCA_000363385.1_Stap_aure_M1359_V1	-	M1359
Staphylococcus aureus M1367	1158490	PRJNA88783	88783	Terrabacteria group	Firmicutes	2.90645	32.9	-	AIZJ01	3	3043	2879	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809084	GCA_000363405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/405/GCA_000363405.1_Stap_aure_M1367_V1	-	M1367
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120213	1412528	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007344.2/CP007344.2	-	1	4705	4450	4/1/14	3/2/17	Chromosome	LFZ	SAMN02384249	GCA_000624455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/455/GCA_000624455.2_ASM62445v2	24786953	EC20120213
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.68935	30.3	-	CUVS01	8	1791	1681	3/31/15	3/18/17	Contig	SC	SAMEA1401413	GCA_001231705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/705/GCA_001231705.1_7213_3_87	-	OXC6632
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09443	37.9	-	JPBY01	19	3148	3044	7/15/14	2/26/17	Contig	Cornell University	SAMN02741611	GCA_000729005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/005/GCA_000729005.1_ASM72900v1	-	FSL R8-7603
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.19611	35.3	-	NHUN01	62	5597	5305	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163292	GCA_002199815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/815/GCA_002199815.1_ASM219981v1	-	MOD1_Bc183
Staphylococcus epidermidis VCU057	904323	PRJNA53729	53729	Terrabacteria group	Firmicutes	2.48041	31.9	-	AHKY01	108	2514	2470	2/1/12	11/19/13	Contig	J. Craig Venter Institute	SAMN00117470	GCA_000245655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/655/GCA_000245655.2_ASM24565v2	-	VCU057
Mycobacterium tuberculosis TKK_04_0081	1448481	PRJNA235486	235486	Terrabacteria group	Actinobacteria	4.39626	65.6	-	JJXK01	1	4275	4109	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585976	GCA_000652755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/755/GCA_000652755.1_Myco_tube_TKK_04_0081_V1	-	TKK_04_0081
Escherichia coli O157:H7 str. EDL933	155864	PRJNA259	259	Proteobacteria	Gammaproteobacteria	5.62052	50.3541	chromosome:NC_002655.2/AE005174.2; plasmid pO157:NC_007414.1/AF074613.1	-	2	6009	5522	1/25/01	5/18/17	Chromosome	Univ. Wisconsin	SAMN02604092	GCA_000006665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/006/665/GCA_000006665.1_ASM666v1	11206551	EDL933
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12804	39.6	-	CKXA01	84	2352	2121	3/21/15	3/4/17	Contig	SC	SAMEA1025799	GCA_001090045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/045/GCA_001090045.1_6823_6_15	-	SMRU1983
Helicobacter pylori SA161A	1345562	PRJEB4073	216031	Proteobacteria	delta/epsilon subdivisions	1.65399	39	-	CBPE01	49	1631	1407	9/21/13	4/10/17	Contig	MHH	SAMEA2271941	GCA_000476395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/395/GCA_000476395.1_SA161A	23898187	SA161A
Neisseria meningitidis	487	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	2.39751	49.1	-	JVHF01	51	2425	2278	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197627	GCA_001063405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/405/GCA_001063405.1_ASM106340v1	26230489	433_NMEN
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.38043	66.5	-	JTXL01	50	6056	5889	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105472	GCA_000794625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/625/GCA_000794625.1_AZPAE14693	25367914	AZPAE14693
Acinetobacter baumannii UH8107	1398984	PRJNA218785	218785	Proteobacteria	Gammaproteobacteria	4.2092	39	-	AYFD01	150	4141	3983	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597382	GCA_000515915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/915/GCA_000515915.1_gabuh8107_v01	24449752	UH8107
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.1841	35.3	-	LCUX01	35	2285	2136	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435038	GCA_001016575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/575/GCA_001016575.1_ASM101657v1	25946017	ES-PW-008
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.10436	41.1	-	FISU01	25	2106	1994	2/10/16	3/19/17	Contig	SC	SAMEA1566018	GCA_900049185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/185/GCA_900049185.1_8525_5_1	-	FX184_2
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54045	38.3	-	FJIO01	63	3238	3090	2/20/16	3/27/17	Contig	SC	SAMEA2077752	GCA_900062595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/595/GCA_900062595.1_10625_2_92	-	2532STDY5467565
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.72138	50.6	-	CWUM01	589	5725	4407	7/16/15	2/24/17	Scaffold	SC	SAMEA3345019	GCA_001252015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/015/GCA_001252015.1_H14142025201	-	25201ss_1
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.4075	67.9	-	LWZT01	186	7657	7031	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208688	GCA_001978835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/835/GCA_001978835.1_ASM197883v1	-	NAU22A-5
Vibrio cholerae	666	PRJNA339415	339415	Proteobacteria	Gammaproteobacteria	3.99859	47.2	-	MIPJ01	150	3761	3559	10/14/16	3/28/17	Contig	Georgia Institute of Technology	SAMN05590425	GCA_001857455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/455/GCA_001857455.1_ASM185745v1	-	SIO
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.10135	28.7	-	MPFN01	147	3714	3578	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710949	GCA_002302925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/925/GCA_002302925.1_ASM230292v1	-	7482-DH/ST42
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.19387	45.3	-	LBHE01	32	5058	4813	6/9/15	3/26/17	Contig	University of New Hampshire	SAMN03107385	GCA_001023105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/105/GCA_001023105.1_ASM102310v1	25832299	MAVP-36
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.84863	57	-	LEVU01	15	5922	5636	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280254	GCA_001031315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/315/GCA_001031315.1_Kleb_pneu_CHS111_V1	-	CHS111
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.97325	37.3	-	JVOC01	161	3043	2929	7/10/15	3/26/17	Contig	University of Washington	SAMN03197448	GCA_001056115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/115/GCA_001056115.1_ASM105611v1	26230489	257_EFLS
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.149	52.4	-	CQKL01	80	2517	2195	3/22/15	4/11/17	Scaffold	SC	SAMEA1677289	GCA_001117665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/665/GCA_001117665.1_8727_5_84	-	GCGS234
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	2.96229	38.1	-	LNMS01	216	3182	2801	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270964	GCA_001547285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/285/GCA_001547285.1_ASM154728v1	-	VRE-1407687
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.73563	67.7	-	CSPG01	900	3768	3059	3/22/15	3/26/17	Scaffold	SC	SAMEA751472	GCA_001195265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/265/GCA_001195265.1_5476_6_1	-	B028
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68749	31.3	-	FBHM01	26	1761	1660	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683259	GCA_001491475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/475/GCA_001491475.1_CCN154	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.09666	55	-	FKDI01	61	5004	4750	4/6/16	3/28/17	Scaffold	SC	SAMEA2273446	GCA_900076495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/495/GCA_900076495.1_12045_5_24	-	e2260
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.02344	64.3	-	FSIS01	21	5007	4896	12/14/16	3/21/17	Contig	SC	SAMEA2071615	GCA_900136415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/415/GCA_900136415.1_10208_3_44	-	469
Pseudomonas sp. 25 E 4	1844097	PRJEB9508	335877	Proteobacteria	Gammaproteobacteria	5.55315	60.9	-	CVTJ01	62	5051	4814	7/29/16	4/13/17	Scaffold	"JOHN INNES CENTRE, NORWICH, UK."	SAMEA3442622	GCA_900004645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/004/645/GCA_900004645.1_PSEFL294_LIB5400	-	-
Streptomyces sp. CB02115	1703939	PRJNA293172	293172	Terrabacteria group	Actinobacteria	8.69034	71.7	-	LIVW01	16	7639	7368	12/15/16	3/15/17	Scaffold	The Scripps Research Institute	SAMN03999388	GCA_001905645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/645/GCA_001905645.1_ASM190564v1	27999165	CB02115
Streptomyces sp. CB02261	1703940	PRJNA293172	293172	Terrabacteria group	Actinobacteria	7.70565	72.3	-	LIVX01	18	6966	6679	12/15/16	3/15/17	Scaffold	The Scripps Research Institute	SAMN03999389	GCA_001905665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/665/GCA_001905665.1_ASM190566v1	27999165	CB02261
Pseudomonas sp. 52 E 6	1844106	PRJEB9508	335877	Proteobacteria	Gammaproteobacteria	6.34532	60	-	CVTR01	49	5896	5667	7/29/16	4/13/17	Scaffold	"JOHN INNES CENTRE, NORWICH, UK."	SAMEA3442631	GCA_900004655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/004/655/GCA_900004655.1_PSEFL294_LIB5411	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.26722	64.1	-	FVND01	27	5327	5212	3/10/17	3/18/17	Contig	SC	SAMEA2071621	GCA_900136445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/445/GCA_900136445.1_10208_3_68	-	493
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.79086	55.1	-	FKCR01	40	4691	4470	4/6/16	3/28/17	Scaffold	SC	SAMEA2273447	GCA_900076505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/505/GCA_900076505.1_12045_5_25	-	e2273
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.73956	31.1	-	FBDU01	31	1835	1688	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683159	GCA_001491495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/495/GCA_001491495.1_SS_2263	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.75029	67.3	-	CSOB01	717	3768	2953	3/22/15	3/26/17	Scaffold	SC	SAMEA1933004	GCA_001195625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/625/GCA_001195625.1_5463_3_5	-	B160
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.08395	37.9	-	LNMR01	163	3269	2950	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270963	GCA_001547315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/315/GCA_001547315.1_ASM154731v1	-	VRE-1406092
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.15114	52.4	-	CQOJ01	77	2527	2196	3/23/15	4/11/17	Scaffold	SC	SAMEA1690368	GCA_001120685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/685/GCA_001120685.1_8727_8_62	-	GCGS158
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.09886	37.3	-	JVNY01	80	3145	3001	7/10/15	3/26/17	Contig	University of Washington	SAMN03197452	GCA_001056135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/135/GCA_001056135.1_ASM105613v1	26230489	26_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.34896	57.4	-	LEVV01	4	5295	5045	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280255	GCA_001031325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/325/GCA_001031325.1_Kleb_pneu_CHS112_V1	-	CHS112
Vibrio parahaemolyticus	670	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.31806	45.2	-	JWSV01	8	5182	4847	12/29/14	7/6/17	Contig	US Food and Drug Administration 	SAMN03255433	GCA_001188035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/035/GCA_001188035.1_ASM118803v1	-	K1198
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.17904	28.7	-	MPFO01	321	3861	3673	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710950	GCA_002302945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/945/GCA_002302945.1_ASM230294v1	-	7483-CF/ST37
Vibrio cholerae	666	PRJNA339415	339415	Proteobacteria	Gammaproteobacteria	4.0608	47.6	-	MIPK01	291	3832	3679	10/14/16	3/28/17	Contig	Georgia Institute of Technology	SAMN05590426	GCA_001857485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/485/GCA_001857485.1_ASM185748v1	-	TP
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.1349	68.2	-	LWZU01	133	7401	6820	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208689	GCA_001978865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/865/GCA_001978865.1_ASM197886v1	-	NAU22B-1
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.41984	50.8	-	CXEC01	375	4703	4209	7/16/15	2/24/17	Scaffold	SC	SAMEA954596	GCA_001252035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/035/GCA_001252035.1_5417_2_2	-	20003593_1361393
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.52649	38.3	-	FJIR01	140	3223	3046	2/20/16	3/27/17	Contig	SC	SAMEA2080687	GCA_900062605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/605/GCA_900062605.1_10625_2_88	-	2532STDY5467561
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.1068	41.2	-	FIGW01	43	2084	1942	2/10/16	3/19/17	Contig	SC	SAMEA1316544	GCA_900049345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/345/GCA_900049345.1_7114_5_42	-	LSS42
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.1269	35.3	-	LCUW01	22	2208	2081	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435037	GCA_001016595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/595/GCA_001016595.1_ASM101659v1	25946017	ES-PW-004
Acinetobacter baumannii UH8407	1398985	PRJNA218786	218786	Proteobacteria	Gammaproteobacteria	3.91769	38.9	-	AYFC01	92	3786	3651	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597381	GCA_000515935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/935/GCA_000515935.1_gabuh8407_v01	24449752	UH8407
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.96429	65.9	-	JTXK01	268	6844	6504	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105473	GCA_000794645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/645/GCA_000794645.1_AZPAE14694	25367914	AZPAE14694
Neisseria meningitidis	487	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	2.15439	49.8	-	JVKZ01	57	2072	1969	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197529	GCA_001064635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/635/GCA_001064635.1_ASM106463v1	26230489	338.rep2_NMEN
Helicobacter pylori SA34A	1345514	PRJEB4044	215912	Proteobacteria	delta/epsilon subdivisions	1.64485	38.5	-	CBPI01	31	1589	1444	9/21/13	3/24/17	Contig	MHH	SAMEA2272671	GCA_000476415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/415/GCA_000476415.1_SA34A	23898187	SA34A
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.06362	39.6	-	CKSY01	64	2256	2028	3/21/15	3/4/17	Contig	SC	SAMEA1025485	GCA_001090065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/065/GCA_001090065.1_6807_3_4	-	SMRU1612
Escherichia coli ED1a	585397	PRJNA33409	33409	Proteobacteria	Gammaproteobacteria	5.20955	50.7	chromosome:NC_011745.1/CU928162.2	-	1	5503	5059	12/17/08	2/22/17	Chromosome	Genoscope	SAMEA3138232	GCA_000026305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/305/GCA_000026305.1_ASM2630v1	-	ED1a
Mycobacterium tuberculosis TKK_04_0082	1448482	PRJNA235487	235487	Terrabacteria group	Actinobacteria	4.39408	65.6	-	JJXJ01	1	4266	4108	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585977	GCA_000652775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/775/GCA_000652775.1_Myco_tube_TKK_04_0082_V1	-	TKK_04_0082
Staphylococcus epidermidis VCU123	904340	PRJNA53763	53763	Terrabacteria group	Firmicutes	2.43703	32	-	AHLE01	80	2466	2397	2/7/12	11/19/13	Contig	J. Craig Venter Institute	SAMN00117447	GCA_000247105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/105/GCA_000247105.2_ASM24710v2	-	VCU123
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	4.96393	35.4	-	NHUO01	42	5409	5075	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163291	GCA_002199825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/825/GCA_002199825.1_ASM219982v1	-	MOD1_Bc184
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09681	37.9	-	JPBZ01	16	3147	3047	7/15/14	2/26/17	Contig	Cornell University	SAMN02741612	GCA_000729015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/015/GCA_000729015.1_ASM72901v1	-	FSL R8-7635
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.75115	30.3	-	CUSP01	17	1862	1757	3/31/15	3/18/17	Contig	SC	SAMEA1401461	GCA_001231745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/745/GCA_001231745.1_7213_3_10	-	OXC6553
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120219	1412548	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007345.2/CP007345.2	-	1	4709	4447	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384269	GCA_000624475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/475/GCA_000624475.2_ASM62447v2	24786953	EC20120219
Staphylococcus aureus M1373	1158491	PRJNA88785	88785	Terrabacteria group	Firmicutes	2.91303	33	-	AIZK01	8	3045	2879	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809085	GCA_000363425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/425/GCA_000363425.1_Stap_aure_M1373_V1	-	M1373
Staphylococcus aureus M1374	1169275	PRJNA158799	158799	Terrabacteria group	Firmicutes	2.85045	32.8	-	AOBH01	10	2997	2836	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00839760	GCA_000363445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/445/GCA_000363445.1_Stap_aure_M1374_V1	-	M1374
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120229	1412547	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68583	52.2	chromosome:NZ_CP007346.2/CP007346.2	-	1	4708	4448	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384268	GCA_000624495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/495/GCA_000624495.2_ASM62449v2	24786953	EC20120229
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.74371	30.2	-	CUPL01	30	1820	1676	3/31/15	3/18/17	Contig	SC	SAMEA1010315	GCA_001231765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/765/GCA_001231765.1_7092_1_21	-	OXC6468
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.05858	37.9	-	JPCC01	58	3091	3002	7/15/14	2/27/17	Contig	Cornell University	SAMN02741616	GCA_000729045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/045/GCA_000729045.2_ASM72904v2	-	FSL R8-7716
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.20118	35.4	-	NHUQ01	39	5631	5305	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163277	GCA_002199845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/845/GCA_002199845.1_ASM219984v1	-	MOD1_Bc186
Staphylococcus epidermidis IS-250	904789	PRJNA53813	53813	Terrabacteria group	Firmicutes	2.54442	32	-	AJJR01	66	2578	2503	4/5/12	12/5/13	Contig	J. Craig Venter Institute	SAMN02436581	GCA_000257945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/945/GCA_000257945.1_SaureusIS250v1.0	-	IS-250
Mycobacterium tuberculosis TKK_04_0083	1448483	PRJNA235488	235488	Terrabacteria group	Actinobacteria	4.40193	65.6	-	JJXI01	2	4281	4114	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585978	GCA_000652795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/795/GCA_000652795.1_Myco_tube_TKK_04_0083_V1	-	TKK_04_0083
Escherichia coli FAP1	1412834	PRJNA260958	260958	Proteobacteria	Gammaproteobacteria	5.25463	50.523	chromosome:NZ_CP009578.1/CP009578.1; plasmid unnamed 1:NZ_CP009579.1/CP009579.1; plasmid unnamed 2:NZ_CP009580.1/CP009580.1; plasmid unnamed 3:NZ_CP009581.1/CP009581.1; plasmid unnamed 4:NZ_CP009582.1/CP009582.1	-	5	5489	5069	10/10/14	2/23/17	Chromosome	University Medical Center Utrecht	SAMN03067748	GCA_000765435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/765/435/GCA_000765435.1_ASM76543v1	-	FAP1
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09031	39.6	-	CKKG01	56	2282	2043	3/21/15	3/6/17	Contig	SC	SAMEA1024034	GCA_001090085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/085/GCA_001090085.1_6631_6_5	-	type strain: N
Helicobacter pylori SA222C	1345511	PRJEB4115	215910	Proteobacteria	delta/epsilon subdivisions	1.63002	38.9	-	CBON01	38	1612	1437	9/21/13	3/24/17	Contig	MHH	SAMEA2272079	GCA_000476435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/435/GCA_000476435.1_SA222C	23898187	SA222C
Neisseria meningitidis	487	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	2.15885	49.3	-	JUTK01	119	2137	1961	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197986	GCA_001067255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/255/GCA_001067255.1_ASM106725v1	26230489	776_NMEN
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.75702	66.1	-	JTXJ01	179	6518	6240	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105474	GCA_000794665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/665/GCA_000794665.1_AZPAE14695	25367914	AZPAE14695
Acinetobacter baumannii UH8707	1398986	PRJNA218787	218787	Proteobacteria	Gammaproteobacteria	3.91786	38.9	-	AYFB01	88	3778	3649	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597380	GCA_000515955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/955/GCA_000515955.1_gabuh8707_v01	24449752	UH8707
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.15312	35.2	-	LCUY01	40	2198	2064	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435039	GCA_001016615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/615/GCA_001016615.1_ASM101661v1	25946017	ES-PW-033
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	1.98593	41.3	-	FIML01	23	2000	1880	2/10/16	3/19/17	Contig	SC	SAMEA1566150	GCA_900049355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/355/GCA_900049355.1_8337_6_10	-	BM216a
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.53879	38.3	-	FJIQ01	69	3239	3087	2/20/16	3/27/17	Contig	SC	SAMEA2077750	GCA_900062615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/615/GCA_900062615.1_10625_2_86	-	2532STDY5467559
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.86981	50.7	-	CWVL01	399	5487	4722	7/16/15	2/24/17	Scaffold	SC	SAMEA3345079	GCA_001252095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/095/GCA_001252095.1_Sg_201401096_AGTTCC_L001	-	201401096_1
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.15264	68.2	-	LWZV01	90	7416	6832	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208690	GCA_001978875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/875/GCA_001978875.1_ASM197887v1	-	NAU24B-3
Vibrio cholerae	666	PRJNA339415	339415	Proteobacteria	Gammaproteobacteria	4.05663	47.3	-	MIPL01	142	3822	3634	10/14/16	3/28/17	Contig	Georgia Institute of Technology	SAMN05590437	GCA_001857505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/505/GCA_001857505.1_ASM185750v1	-	3568-07
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.16996	28.5	-	MPGN01	308	3877	3702	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710953	GCA_002302975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/975/GCA_002302975.1_ASM230297v1	-	7488-NonSp/ST103
Vibrio parahaemolyticus	670	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.17374	45.3	-	JWSR01	4	5004	4685	12/24/14	7/6/17	Contig	US Food and Drug Administration 	SAMN03255432	GCA_001188135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/135/GCA_001188135.1_ASM118813v1	-	98-513-F52
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.86945	56.9	-	LEVW01	12	5991	5697	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280256	GCA_001031345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/345/GCA_001031345.1_Kleb_pneu_CHS113_V1	-	CHS113
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.87829	37.5	-	JVBW01	51	2936	2769	7/10/15	3/26/17	Contig	University of Washington	SAMN03197766	GCA_001057325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/325/GCA_001057325.1_ASM105732v1	26230489	566.rep1_EFLS
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.09548	52.6	-	CQMO01	75	2463	2129	3/23/15	4/11/17	Scaffold	SC	SAMEA1677478	GCA_001123845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/845/GCA_001123845.1_8727_5_54	-	GCGS204
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.15201	37.8	-	LNLD01	229	3383	3021	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270923	GCA_001547335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/335/GCA_001547335.1_ASM154733v1	-	S-1402282
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.7145	67.6	-	CSNZ01	1072	3755	2995	3/23/15	3/26/17	Scaffold	SC	SAMEA751151	GCA_001195885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/885/GCA_001195885.1_5601_2_7	-	B088
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.77623	31.1	-	FAXG01	79	1837	1722	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3682999	GCA_001491515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/515/GCA_001491515.1_H055260517	-	-
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.96574	54.8	-	FKCQ01	64	4873	4635	4/6/16	3/28/17	Scaffold	SC	SAMEA2273448	GCA_900076515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/515/GCA_900076515.1_12045_5_26	-	e2282
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.30263	64	-	FVNA01	16	5397	5186	3/10/17	3/18/17	Contig	SC	SAMEA2069155	GCA_900136455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/455/GCA_900136455.1_10208_3_67	-	492
Pseudomonas sp. 24 E 13	1844095	PRJEB9508	335877	Proteobacteria	Gammaproteobacteria	6.01758	60.5	-	CVTO01	165	5512	5201	7/29/16	4/13/17	Scaffold	"JOHN INNES CENTRE, NORWICH, UK."	SAMEA3442620	GCA_900004715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/004/715/GCA_900004715.1_PSEFL294_LIB5398	-	-
Streptomyces sp. CB02460	1703941	PRJNA293172	293172	Terrabacteria group	Actinobacteria	7.4122	71.8	-	LIVY01	22	6670	6399	12/15/16	3/15/17	Scaffold	The Scripps Research Institute	SAMN03999390	GCA_001905705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/705/GCA_001905705.1_ASM190570v1	27999165	CB02460
Streptomyces sp. CB02400	1703944	PRJNA293172	293172	Terrabacteria group	Actinobacteria	8.93106	71.7	-	LIWB01	47	8057	7557	12/15/16	3/15/17	Scaffold	The Scripps Research Institute	SAMN03999393	GCA_001905725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/725/GCA_001905725.1_ASM190572v1	27999165	CB02400
Pseudomonas sp. 25 R 14	1844109	PRJEB9508	335877	Proteobacteria	Gammaproteobacteria	6.33731	60.2	-	CVTS01	69	5847	5634	7/29/16	4/13/17	Scaffold	"JOHN INNES CENTRE, NORWICH, UK."	SAMEA3442634	GCA_900004755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/004/755/GCA_900004755.1_PSEFL294_LIB5742	-	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.87316	64.2	-	FVNC01	20	4857	4715	3/10/17	3/18/17	Contig	SC	SAMEA2069156	GCA_900136465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/465/GCA_900136465.1_10208_3_70	-	495
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.8801	55.5	-	FKCA01	30	4760	4543	4/6/16	3/28/17	Scaffold	SC	SAMEA2273449	GCA_900076525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/525/GCA_900076525.1_12045_5_27	-	e2284
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68958	31.3	-	FBJG01	26	1755	1658	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683307	GCA_001491535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/535/GCA_001491535.1_H140660843	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.70648	67.6	-	CSMF01	864	3760	2991	3/22/15	3/26/17	Scaffold	SC	SAMEA1931798	GCA_001196005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/005/GCA_001196005.1_5463_5_1	-	B206
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.30268	37.5	-	LNLE01	170	3609	3126	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270924	GCA_001547355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/355/GCA_001547355.1_ASM154735v1	-	U-1313438
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.14534	52.4	-	CQJY01	66	2525	2189	3/23/15	4/11/17	Scaffold	SC	SAMEA1677323	GCA_001126245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/245/GCA_001126245.1_8727_5_57	-	GCGS207
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.88764	37.5	-	JVBV01	60	2935	2776	7/10/15	3/26/17	Contig	University of Washington	SAMN03197767	GCA_001057355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/355/GCA_001057355.1_ASM105735v1	26230489	566.rep2_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.75932	57.1	-	LEVX01	8	5902	5624	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280257	GCA_001031385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/385/GCA_001031385.1_Kleb_pneu_CHS114_V1	-	CHS114
Vibrio parahaemolyticus	670	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.14905	45.3	-	JWSS01	2	4970	4599	12/24/14	7/6/17	Contig	US Food and Drug Administration 	SAMN03255431	GCA_001188185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/185/GCA_001188185.1_ASM118818v1	-	10329
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	3.96723	29.2	-	MPGG01	1185	3746	3326	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710952	GCA_002302985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/302/985/GCA_002302985.1_ASM230298v1	-	7487-DH/ST42
Vibrio cholerae	666	PRJNA339415	339415	Proteobacteria	Gammaproteobacteria	3.97887	47.6	-	MIPM01	143	3720	3541	10/14/16	3/28/17	Contig	Georgia Institute of Technology	SAMN05590438	GCA_001857515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/515/GCA_001857515.1_ASM185751v1	-	HE46
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.1311	68.2	-	LWZW01	176	7408	6805	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208692	GCA_001978905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/905/GCA_001978905.1_ASM197890v1	-	NAU33A-6
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.75118	50.7	-	CXNN01	361	5366	4587	7/16/15	2/24/17	Scaffold	SC	SAMEA2057232	GCA_001252115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/115/GCA_001252115.1_9870_7_1	-	144358
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54006	38.3	-	FJIU01	62	3237	3088	2/20/16	3/27/17	Contig	SC	SAMEA2080792	GCA_900062625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/625/GCA_900062625.1_10625_3_59	-	2532STDY5467628
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.06378	41.1	-	FISR01	17	2074	1965	2/10/16	3/19/17	Contig	SC	SAMEA1566102	GCA_900049365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/365/GCA_900049365.1_8337_6_92	-	FX74
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.25114	35.5	-	LCVB01	39	2323	2170	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435042	GCA_001016625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/625/GCA_001016625.1_ASM101662v1	25946017	ES-PW-063
Acinetobacter baumannii UH8807	1398987	PRJNA218788	218788	Proteobacteria	Gammaproteobacteria	3.92593	38.8	-	AYFA01	144	3823	3683	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597379	GCA_000515975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/975/GCA_000515975.1_gabuh8807_v01	24449752	UH8807
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.53191	66.2	-	JTXI01	225	6307	5940	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105475	GCA_000794675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/675/GCA_000794675.1_AZPAE14697	25367914	AZPAE14697
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.06758	52	-	CMYL01	145	2325	2057	3/23/15	3/21/17	Scaffold	SC	SAMEA1031653	GCA_001083305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/305/GCA_001083305.1_6714_2_7	-	NM1845
Helicobacter pylori SA210C	1345591	PRJEB4102	216059	Proteobacteria	delta/epsilon subdivisions	1.6623	38.9	-	CBOQ01	46	1628	1462	9/21/13	3/24/17	Contig	MHH	SAMEA2272420	GCA_000476455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/455/GCA_000476455.1_SA210C	23898187	SA210C
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05782	39.6	-	CNQQ02	274	2184	2001	3/23/15	3/11/17	Contig	SC	SAMEA1032563	GCA_001090185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/185/GCA_001090185.2_6999_1_1	-	R34-3184
Escherichia coli	562	PRJNA286320	286320	Proteobacteria	Gammaproteobacteria	4.68941	50.7	chromosome:NZ_CP013048.1/CP013048.1	-	1	4818	4468	12/2/15	2/25/17	Chromosome	Universidade Estadual de Campinas	SAMN03768475	GCA_001455405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/405/GCA_001455405.1_ASM145540v1	26823578	RS76
Mycobacterium tuberculosis TKK_04_0084	1448484	PRJNA235489	235489	Terrabacteria group	Actinobacteria	4.3992	65.6	-	JJXH01	4	4302	4106	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585979	GCA_000652815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/815/GCA_000652815.1_Myco_tube_TKK_04_0084_V1	-	TKK_04_0084
Staphylococcus epidermidis NIHLM053	979206	PRJNA62359	62359	Terrabacteria group	Firmicutes	2.55564	32	-	AKGP01	129	2515	2465	7/9/12	11/19/13	Contig	NISC - NIH Intramural Sequencing Center	SAMN00993262	GCA_000276405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/405/GCA_000276405.1_ASM27640v1	-	NIHLM053
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.20185	35.4	-	NHUT01	62	5622	5303	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163274	GCA_002199875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/875/GCA_002199875.1_ASM219987v1	-	MOD1_Bc189
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.13715	37.8	-	JPCI01	42	3239	3136	7/15/14	2/26/17	Contig	Cornell University	SAMN02741622	GCA_000729055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/055/GCA_000729055.1_ASM72905v1	-	FSL R8-7820
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.68605	30.5	-	CUIS01	13	1781	1670	3/31/15	3/18/17	Contig	SC	SAMEA1010635	GCA_001231785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/785/GCA_001231785.1_7038_3_34	-	OXC6284
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120240	1412546	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007347.2/CP007347.2	-	1	4712	4448	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384267	GCA_000624515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/515/GCA_000624515.2_ASM62451v2	24786953	EC20120240
Staphylococcus aureus M1394	1158492	PRJNA88787	88787	Terrabacteria group	Firmicutes	2.83833	32.9	-	AIZL01	2	2978	2818	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809086	GCA_000363465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/465/GCA_000363465.1_Stap_aure_M1394_V1	-	M1394
Staphylococcus aureus M1405	1169276	PRJNA158801	158801	Terrabacteria group	Firmicutes	2.87323	32.9	-	AOBI01	15	3027	2860	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00839761	GCA_000363485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/485/GCA_000363485.1_Stap_aure_M1405_V1	-	M1405
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120356	1412602	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68619	52.2	chromosome:NZ_CP007348.2/CP007348.2	-	1	4708	4450	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384323	GCA_000624535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/535/GCA_000624535.2_ASM62453v2	24786953	EC20120356
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.72987	30.3	-	CUTP01	28	1833	1705	3/31/15	3/18/17	Contig	SC	SAMEA1401617	GCA_001231845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/845/GCA_001231845.1_7213_3_32	-	OXC6575
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.06086	37.8	-	JPCA01	30	3129	3031	7/15/14	2/26/17	Contig	Cornell University	SAMN02741614	GCA_000729075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/075/GCA_000729075.1_ASM72907v1	-	FSL R8-7676
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	4.9481	35.4	-	NHUU01	60	5368	5060	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163273	GCA_002199895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/895/GCA_002199895.1_ASM219989v1	-	MOD1_Bc190
Staphylococcus epidermidis NIHLM070	979202	PRJNA62351	62351	Terrabacteria group	Firmicutes	2.47119	32	-	AKGL01	66	2325	2252	7/9/12	11/19/13	Contig	NISC - NIH Intramural Sequencing Center	SAMN00991854	GCA_000276485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/485/GCA_000276485.1_ASM27648v1	-	NIHLM070
Mycobacterium tuberculosis TKK_04_0086	1448485	PRJNA235490	235490	Terrabacteria group	Actinobacteria	4.40663	65.5	-	JJXG01	5	4288	4098	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02585980	GCA_000652835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/835/GCA_000652835.1_Myco_tube_TKK_04_0086_V1	-	TKK_04_0086
Escherichia coli	562	PRJNA321990	321990	Proteobacteria	Gammaproteobacteria	5.17157	50.7302	chromosome:NZ_CP016034.1/CP016034.1; plasmid pC06114_1:NZ_CP016035.1/CP016035.1; plasmid pC06114_2:NZ_CP016036.1/CP016036.1; plasmid pC06114_3:NZ_CP016037.1/CP016037.1; plasmid pC06114_4:NZ_CP016038.1/CP016038.1; plasmid pC06114_5:NZ_CP016039.1/CP016039.1; plasmid pC06114_6:NZ_CP016040.1/CP016040.1; plasmid pC06114_7:NZ_CP016041.1/CP016041.1; plasmid pC06114_8:NZ_CP016042.1/CP016042.1	-	9	5382	5006	6/20/16	2/25/17	Chromosome	University Medical Center Hamburg-Eppendorf	SAMN04963292	GCA_001672015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/015/GCA_001672015.1_ASM167201v1	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08123	39.6	-	CNSH02	166	2286	2066	3/23/15	3/11/17	Contig	SC	SAMEA1032548	GCA_001090345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/345/GCA_001090345.2_6999_2_9	-	R34-3215
Helicobacter pylori SA253C	1345539	PRJEB4128	216005	Proteobacteria	delta/epsilon subdivisions	1.64619	38.5	-	CBOR01	44	1603	1437	9/21/13	3/24/17	Contig	MHH	SAMEA2272190	GCA_000476475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/475/GCA_000476475.1_SA253C	23898187	SA253C
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.06317	52	-	CMWY01	149	2333	2048	3/23/15	3/21/17	Scaffold	SC	SAMEA1031681	GCA_001083765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/765/GCA_001083765.1_6714_1_17	-	NM1573
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.46737	65.5	-	JTXH01	378	6470	5842	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105476	GCA_000794705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/705/GCA_000794705.1_AZPAE14698	25367914	AZPAE14698
Acinetobacter baumannii UH9007	1398989	PRJNA218790	218790	Proteobacteria	Gammaproteobacteria	4.19183	39	-	AYEY01	216	4126	3949	1/7/14	3/18/17	Contig	J. Craig Venter Institute	SAMN02597377	GCA_000515995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/515/995/GCA_000515995.2_gabuh9007_v01	24449752	UH9007
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	1.95092	35.1	-	LCUZ01	36	1968	1837	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435040	GCA_001016655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/655/GCA_001016655.1_ASM101665v1	25946017	ES-PW-034
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.40554	41.6	-	FIGK01	111	2384	2214	2/10/16	3/19/17	Contig	SC	SAMEA1316672	GCA_900049625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/625/GCA_900049625.1_7114_5_36	-	LSS36
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.5416	38.3	-	FJIY01	61	3231	3090	2/20/16	3/27/17	Contig	SC	SAMEA2080679	GCA_900062635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/635/GCA_900062635.1_10625_2_65	-	2532STDY5467538
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.56636	50.9	-	CXDG01	471	4833	4090	7/16/15	2/24/17	Scaffold	SC	SAMEA954673	GCA_001252135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/135/GCA_001252135.1_5236_6_9	-	Sh1167_440937
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.12047	68.2	-	LWZX01	92	7382	6804	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208693	GCA_001978925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/925/GCA_001978925.1_ASM197892v1	-	NAU35A-2
Vibrio cholerae V52	345076	PRJNA339415	339415	Proteobacteria	Gammaproteobacteria	3.98814	47.5	-	MIPN01	267	3824	3668	10/14/16	3/28/17	Contig	Georgia Institute of Technology	SAMN05590436	GCA_001857545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/545/GCA_001857545.1_ASM185754v1	-	V52
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.05105	28.3	-	MPGO01	269	3733	3577	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710954	GCA_002303005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/005/GCA_002303005.1_ASM230300v1	-	7490-G/ST8
Vibrio parahaemolyticus	670	PRJNA288141	288141	Proteobacteria	Gammaproteobacteria	5.05213	45.3	-	LFWF01	94	4881	4635	8/14/15	3/26/17	Contig	Health Canada	SAMN03795177	GCA_001267555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/555/GCA_001267555.1_ASM126755v1	-	ISF-01-07
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.84822	57	-	LEVY01	7	5958	5679	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280258	GCA_001031395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/395/GCA_001031395.1_Kleb_pneu_CHS115_V1	-	CHS115
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.8841	37.4	-	JVAM01	155	2896	2775	7/10/15	3/26/17	Contig	University of Washington	SAMN03197802	GCA_001057515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/515/GCA_001057515.1_ASM105751v1	26230489	601_EFLS
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.14408	52.4	-	CQIY01	64	2520	2189	3/23/15	4/11/17	Scaffold	SC	SAMEA1677399	GCA_001127565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/565/GCA_001127565.1_8727_5_47	-	GCGS197
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	2.32033	38.4	-	LNMV01	142	2362	2230	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270967	GCA_001547365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/365/GCA_001547365.1_ASM154736v1	-	VRE-1408197
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.71429	67.6	-	CSRQ01	1185	3771	2968	3/23/15	3/26/17	Scaffold	SC	SAMEA751239	GCA_001196085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/085/GCA_001196085.1_5601_5_12	-	B318
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.73269	31.1	-	FBNY01	74	1787	1661	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683418	GCA_001491555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/555/GCA_001491555.1_H055260513	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.97887	55	-	FKCT01	78	4911	4649	4/6/16	3/28/17	Scaffold	SC	SAMEA2273450	GCA_900076535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/535/GCA_900076535.1_12045_5_28	-	e2300
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.03799	64.2	-	FSIY01	48	5058	4917	12/14/16	3/21/17	Contig	SC	SAMEA2069316	GCA_900136485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/485/GCA_900136485.1_10208_3_76	-	501
Pseudomonas sp. 28 E 9	1844098	PRJEB9508	335877	Proteobacteria	Gammaproteobacteria	6.24747	60.5	-	CVTK01	58	5715	5438	7/29/16	4/13/17	Scaffold	"JOHN INNES CENTRE, NORWICH, UK."	SAMEA3442623	GCA_900004785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/004/785/GCA_900004785.1_PSEFL294_LIB5402	-	-
Streptomyces sp. CB01249	1703929	PRJNA293172	293172	Terrabacteria group	Actinobacteria	7.63695	71.9	-	LISW01	13	6822	6628	12/15/16	3/15/17	Scaffold	The Scripps Research Institute	SAMN03999378	GCA_001905735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/735/GCA_001905735.1_ASM190573v1	27999165	CB01249
Streptomyces sp. CB02130	1703934	PRJNA293172	293172	Terrabacteria group	Actinobacteria	8.13427	71.6	-	LIXK01	20	7310	6954	12/15/16	3/15/17	Scaffold	The Scripps Research Institute	SAMN03999383	GCA_001905785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/785/GCA_001905785.1_ASM190578v1	27999165	CB02130
Pseudomonas sp. 24 R 17	1844096	PRJEB9508	335877	Proteobacteria	Gammaproteobacteria	6.36022	59.8	-	CVTI01	47	5961	5724	7/29/16	4/13/17	Scaffold	"JOHN INNES CENTRE, NORWICH, UK."	SAMEA3442621	GCA_900004795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/004/795/GCA_900004795.1_PSEFL294_LIB5399	-	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.01653	64	-	FVNF01	26	4972	4807	3/10/17	3/18/17	Contig	SC	SAMEA2071623	GCA_900136495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/495/GCA_900136495.1_10208_3_74	-	499
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.80856	55.1	-	FKDC01	46	4717	4488	4/6/16	3/28/17	Scaffold	SC	SAMEA2273451	GCA_900076545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/545/GCA_900076545.1_12045_5_29	-	e2346
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.7412	31.1	-	FBMA01	67	1795	1683	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683372	GCA_001491575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/575/GCA_001491575.1_UNOR14731d	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.71665	67.5	-	CSNV01	723	3755	3020	3/22/15	3/26/17	Scaffold	SC	SAMEA2015299	GCA_001196395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/395/GCA_001196395.1_5463_7_11	-	B204
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.19686	37.8	-	LNMN01	201	3426	3065	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270959	GCA_001547395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/395/GCA_001547395.1_ASM154739v1	-	VRE-1404029
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.15057	52.4	-	CQIX01	77	2519	2187	3/23/15	4/11/17	Scaffold	SC	SAMEA1690455	GCA_001128265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/265/GCA_001128265.1_8727_8_45	-	GCGS141
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.01896	37.2	-	JUXV01	126	3099	2949	7/10/15	3/26/17	Contig	University of Washington	SAMN03197871	GCA_001057865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/865/GCA_001057865.1_ASM105786v1	26230489	668_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.89375	56.9	-	LEVZ01	6	5986	5650	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280259	GCA_001031405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/405/GCA_001031405.1_Kleb_pneu_CHS116_V1	-	CHS116
Vibrio parahaemolyticus	670	PRJNA288141	288141	Proteobacteria	Gammaproteobacteria	5.0778	45.2	-	LFWG01	71	4960	4712	8/14/15	3/26/17	Contig	Health Canada	SAMN03795178	GCA_001267595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/595/GCA_001267595.1_ASM126759v1	-	ISF-25-6
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.06098	28.8	-	MPFP01	526	3747	3514	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710955	GCA_002303025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/025/GCA_002303025.1_ASM230302v1	-	7491-DH/ST42
Vibrio cholerae	666	PRJNA354722	354722	Proteobacteria	Gammaproteobacteria	4.00069	47.5	-	MPVL01	265	3812	3533	12/9/16	3/28/17	Contig	Russian Research Anti-Plague Institute Microbe	SAMN06050810	GCA_001899465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/465/GCA_001899465.1_ASM189946v1	-	76
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.15236	68.2	-	LWZY01	95	7409	6828	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208694	GCA_001978935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/935/GCA_001978935.1_ASM197893v1	-	NAU35A-4
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.80697	50.5	-	CWWU01	429	5578	4540	7/16/15	2/24/17	Scaffold	SC	SAMEA2434362	GCA_001252155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/155/GCA_001252155.1_12830_1_35	-	KY 696
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54281	38.3	-	FJIX01	63	3241	3091	2/20/16	3/27/17	Contig	SC	SAMEA2077746	GCA_900062645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/645/GCA_900062645.1_10625_2_72	-	2532STDY5467545
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.03342	41.2	-	FIJC01	27	2025	1919	2/10/16	3/19/17	Contig	SC	SAMEA1316659	GCA_900049635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/635/GCA_900049635.1_7054_7_19	-	SS1006
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	1.98426	35.2	-	LCVA01	18	2032	1914	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435041	GCA_001016675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/675/GCA_001016675.1_ASM101667v1	25946017	ES-PW-043
Acinetobacter baumannii UH9707	1398990	PRJNA218791	218791	Proteobacteria	Gammaproteobacteria	4.21619	38.9904	plasmid pABUH6a-8.8:NZ_AYEX01000118.1/AYEX01000118.1	AYEX01	119	4143	4008	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597376	GCA_000516015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/015/GCA_000516015.1_gabuh9707_v01	24449752	UH9707
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.75466	66.1	-	JTXF01	156	6439	6174	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105478	GCA_000794735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/735/GCA_000794735.1_AZPAE14700	25367914	AZPAE14700
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05669	52.1	-	CMXG01	181	2333	2057	3/22/15	3/21/17	Scaffold	SC	SAMEA1031703	GCA_001083885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/885/GCA_001083885.1_6714_1_14	-	NM1549
Helicobacter pylori SA31C	1345513	PRJEB4043	215911	Proteobacteria	delta/epsilon subdivisions	1.61518	39.1	-	CBPM01	47	1590	1433	9/21/13	3/24/17	Contig	MHH	SAMEA2272436	GCA_000476515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/515/GCA_000476515.1_SA31C	23898187	SA31C
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07039	39.5	-	CNPP02	150	2221	2022	3/23/15	3/5/17	Contig	SC	SAMEA1032606	GCA_001090425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/425/GCA_001090425.2_6930_8_8	-	R34-3014
Escherichia coli	562	PRJNA321453	321453	Proteobacteria	Gammaproteobacteria	5.46709	50.4409	chromosome:NZ_CP015855.1/CP015855.1; plasmid pO157:NZ_CP015856.1/CP015856.1	-	2	5795	5280	8/16/16	2/25/17	Chromosome	University of Hohenheim	SAMN04966308	GCA_001705405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/405/GCA_001705405.1_ASM170540v1	-	EDL933-1
Mycobacterium tuberculosis TKK_05MA_0001	1448486	PRJNA235491	235491	Terrabacteria group	Actinobacteria	4.40052	65.6	-	JJXF01	1	4276	4113	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585981	GCA_000652855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/855/GCA_000652855.1_Myco_tube_TKK_05MA_0001_V1	-	TKK_05MA_0001
Staphylococcus epidermidis NIHLM088	979200	PRJNA62347	62347	Terrabacteria group	Firmicutes	2.49979	31.9	-	AKGJ01	53	2343	2292	7/9/12	11/19/13	Contig	NISC - NIH Intramural Sequencing Center	SAMN00991848	GCA_000276525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/525/GCA_000276525.1_ASM27652v1	-	NIHLM088
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.1916	35.3	-	NHUZ01	62	5589	5301	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163265	GCA_002199945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/945/GCA_002199945.1_ASM219994v1	-	MOD1_Bc198
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.10137	37.9	-	JPCB01	27	3162	3064	7/15/14	2/26/17	Contig	Cornell University	SAMN02741615	GCA_000729095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/095/GCA_000729095.1_ASM72909v1	-	FSL R8-7694
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66054	30.5	-	CUPG01	19	1758	1665	3/31/15	3/18/17	Contig	SC	SAMEA1010671	GCA_001231905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/905/GCA_001231905.1_7092_1_17	-	OXC6464
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120469	1412552	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007349.2/CP007349.2	-	1	4709	4449	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384273	GCA_000624555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/555/GCA_000624555.2_ASM62455v2	24786953	EC20120469
Staphylococcus aureus M1450	1158493	PRJNA88789	88789	Terrabacteria group	Firmicutes	2.86706	32.8	-	AIZM01	11	3021	2862	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809087	GCA_000363505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/505/GCA_000363505.1_Stap_aure_M1450_V1	-	M1450
Staphylococcus aureus M1451	1158494	PRJNA88791	88791	Terrabacteria group	Firmicutes	2.90037	33	-	AIZN01	7	3033	2863	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809088	GCA_000363525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/525/GCA_000363525.1_Stap_aure_M1451_V1	-	M1451
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120496	1412556	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007350.2/CP007350.2	-	1	4709	4450	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384277	GCA_000624575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/575/GCA_000624575.2_ASM62457v2	24786953	EC20120496
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.67688	30.4	-	CUKQ01	17	1766	1673	3/31/15	3/18/17	Contig	SC	SAMEA1010506	GCA_001231985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/985/GCA_001231985.1_7038_3_81	-	OXC6331
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.10497	37.8	-	JPCM01	33	3199	3084	7/15/14	2/26/17	Contig	Cornell University	SAMN02741626	GCA_000729125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/125/GCA_000729125.1_ASM72912v1	-	FSL R8-7842
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.14204	35.4	-	NHVD01	59	5522	5234	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163261	GCA_002199955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/955/GCA_002199955.1_ASM219995v1	-	MOD1_Bc202
Staphylococcus epidermidis 12142587	1235440	PRJNA175894	175894	Terrabacteria group	Firmicutes	2.55607	31.9	-	AMSJ01	81	-	-	10/9/12	1/8/14	Contig	URMITE	SAMN02471330	GCA_000304575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/575/GCA_000304575.1_ASM30457v1	23363834	12142587
Mycobacterium tuberculosis TKK_05MA_0004	1448488	PRJNA235493	235493	Terrabacteria group	Actinobacteria	4.40938	65.6	-	JJXE01	83	4334	4135	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585983	GCA_000652875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/875/GCA_000652875.1_Myco_tube_TKK_05MA_0004_V1	-	TKK_05MA_0004
Escherichia coli str. K-12 substr. W3110	316407	PRJNA352084	352084	Proteobacteria	Gammaproteobacteria	4.54121	50.8	chromosome:NZ_CP017979.1/CP017979.1	-	1	4686	4362	11/14/16	2/25/17	Chromosome	University of Southern California	SAMN05965804	GCA_001878695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/695/GCA_001878695.1_ASM187869v1	-	K-12 substr. ZK126
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.03994	39.7	-	CPOZ01	81	2229	2021	3/23/15	3/11/17	Contig	SC	SAMEA682320	GCA_001090545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/545/GCA_001090545.1_5468_2_7	-	C01_0019
Helicobacter pylori SA251C	1345530	PRJEB4124	215925	Proteobacteria	delta/epsilon subdivisions	1.63156	38.6	-	CBOZ01	53	1580	1426	9/21/13	3/24/17	Contig	MHH	SAMEA2272691	GCA_000476555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/555/GCA_000476555.1_SA251C	23898187	SA251C
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.06946	52	-	CMXE01	146	2321	2065	3/23/15	3/17/17	Scaffold	SC	SAMEA1031727	GCA_001085765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/765/GCA_001085765.1_6714_1_20	-	NM1672
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.99066	65.9	-	JTXE01	251	6870	6531	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105479	GCA_000794745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/745/GCA_000794745.1_AZPAE14701	25367914	AZPAE14701
Acinetobacter baumannii UH9907	1398991	PRJNA218792	218792	Proteobacteria	Gammaproteobacteria	4.21454	39	-	AYEW01	153	4154	3997	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597375	GCA_000516035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/035/GCA_000516035.1_gabuh9907_v01	24449752	UH9907
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.13795	35.4	-	LCUV01	35	2201	2042	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435036	GCA_001016695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/695/GCA_001016695.1_ASM101669v1	25946017	ES-NI-010
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.02325	41.2	-	FIJF01	22	2029	1925	2/10/16	3/19/17	Contig	SC	SAMEA1316517	GCA_900049645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/645/GCA_900049645.1_7054_7_80	-	SS1008
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54149	38.3	-	FJJH01	63	3236	3089	2/20/16	3/27/17	Contig	SC	SAMEA2077975	GCA_900062655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/655/GCA_900062655.1_10625_3_33	-	2532STDY5467602
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.62938	50.8	-	CXDK01	355	4982	4475	7/16/15	2/24/17	Scaffold	SC	SAMEA954797	GCA_001252175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/175/GCA_001252175.1_5236_7_8	-	Sh4474_441045
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.11497	68.2	-	LWZZ01	237	7447	6767	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208695	GCA_001978965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/965/GCA_001978965.1_ASM197896v1	-	NAU35B-2
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.02411	47.5	-	MSGF01	101	3814	3674	3/31/17	4/6/17	Contig	Univ. of Maryland	SAMN06144956	GCA_002076155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/155/GCA_002076155.1_ASM207615v1	28219321	O1S
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.19849	28.6	-	MPFQ01	122	3845	3706	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710956	GCA_002303045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/045/GCA_002303045.1_ASM230304v1	-	7492-CF/ST37
Vibrio parahaemolyticus	670	PRJNA288141	288141	Proteobacteria	Gammaproteobacteria	5.10628	45.3	-	LFWK01	79	4912	4672	8/14/15	3/26/17	Contig	Health Canada	SAMN03795186	GCA_001267625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/625/GCA_001267625.1_ASM126762v1	-	S383-6
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.8962	56.9	-	LEWA01	13	5958	5682	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280260	GCA_001031415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/415/GCA_001031415.1_Kleb_pneu_CHS117_V1	-	CHS117
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.98925	37.2	-	JUXL01	188	3056	2915	7/10/15	3/26/17	Contig	University of Washington	SAMN03197881	GCA_001057915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/915/GCA_001057915.1_ASM105791v1	26230489	679_EFLS
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.15334	52.4	-	CQLM01	88	2528	2207	3/22/15	4/11/17	Scaffold	SC	SAMEA1690435	GCA_001128365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/365/GCA_001128365.1_8289_2_6	-	GCGS006
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	2.75247	38.1	-	LNMT01	151	2817	2651	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270965	GCA_001547415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/415/GCA_001547415.1_ASM154741v1	-	VRE-1407988
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.73408	67.6	-	CSRW01	866	3764	3054	3/22/15	3/26/17	Scaffold	SC	SAMEA751259	GCA_001196455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/455/GCA_001196455.1_5601_3_7	-	B330
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.7511	31.2	-	FBDA01	25	1842	1747	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683142	GCA_001491595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/595/GCA_001491595.1_EC4722	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.86366	55.5	-	FKIS01	47	4771	4539	4/11/16	3/28/17	Scaffold	SC	SAMEA2273453	GCA_900076555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/555/GCA_900076555.1_12045_5_32	-	e2352
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.06894	64.1	-	FSIX01	18	5053	4946	12/14/16	3/21/17	Contig	SC	SAMEA2071624	GCA_900136505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/505/GCA_900136505.1_10208_3_77	-	502
Pseudomonas sp. 37 R 15	1844104	PRJEB9508	335877	Proteobacteria	Gammaproteobacteria	6.31544	60.4	-	CVTV01	62	5725	5451	7/29/16	4/13/17	Scaffold	"JOHN INNES CENTRE, NORWICH, UK."	SAMEA3442629	GCA_900004865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/004/865/GCA_900004865.1_PSEFL294_LIB5409	-	-
Streptomyces sp. CB01580	1703933	PRJNA293172	293172	Terrabacteria group	Actinobacteria	8.49204	71.2	-	LIXJ01	82	7404	6832	12/15/16	3/14/17	Scaffold	The Scripps Research Institute	SAMN03999382	GCA_001905795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/795/GCA_001905795.1_ASM190579v1	27999165	CB01580
Streptomyces sp. CB02009	1703938	PRJNA293172	293172	Terrabacteria group	Actinobacteria	9.20166	72.3	-	LIVV01	35	8181	7803	12/15/16	3/14/17	Scaffold	The Scripps Research Institute	SAMN03999387	GCA_001905825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/825/GCA_001905825.1_ASM190582v1	27999165	CB02009
Pseudomonas sp. 31 R 17	1844101	PRJEB9508	335877	Proteobacteria	Gammaproteobacteria	6.06731	60.7	-	CVTN01	88	5532	5230	7/29/16	4/13/17	Scaffold	"JOHN INNES CENTRE, NORWICH, UK."	SAMEA3442626	GCA_900004915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/004/915/GCA_900004915.1_PSEFL294_LIB5405	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.13027	64.2	-	FVNE01	41	5143	4985	3/10/17	3/18/17	Contig	SC	SAMEA2070914	GCA_900136515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/515/GCA_900136515.1_10208_3_75	-	500
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.96385	54.3	-	FKCG01	17	4815	4605	4/6/16	3/28/17	Scaffold	SC	SAMEA2273452	GCA_900076575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/575/GCA_900076575.1_12045_5_30	-	e2350
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68155	31.3	-	FBIR01	29	1734	1640	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683294	GCA_001491635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/635/GCA_001491635.1_CCN355	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.73423	67.7	-	CSPS01	825	3781	3093	3/23/15	3/26/17	Scaffold	SC	SAMEA751417	GCA_001196575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/575/GCA_001196575.1_5476_3_11	-	B105
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.17945	37.8	-	LNMM01	179	3356	3043	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270958	GCA_001547425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/425/GCA_001547425.1_ASM154742v1	-	VRE-1403540
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14531	52.4	-	CQJB01	68	2503	2187	3/22/15	4/11/17	Scaffold	SC	SAMEA1690374	GCA_001128745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/745/GCA_001128745.1_8289_2_69	-	GCGS069
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.01191	37.2	-	JUWK01	199	3069	2932	7/10/15	3/26/17	Contig	University of Washington	SAMN03197908	GCA_001058015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/015/GCA_001058015.1_ASM105801v1	26230489	703_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.91411	56.9	-	LEWB01	7	6009	5711	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280261	GCA_001031465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/465/GCA_001031465.1_Kleb_pneu_CHS118_V1	-	CHS118
Vibrio parahaemolyticus	670	PRJNA288141	288141	Proteobacteria	Gammaproteobacteria	5.11655	45.3	-	LFWM01	76	4917	4681	8/14/15	3/26/17	Contig	Health Canada	SAMN03795187	GCA_001267635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/635/GCA_001267635.1_ASM126763v1	-	S448-16
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.2137	28.9	-	MPFS01	447	3985	3735	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710958	GCA_002303075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/075/GCA_002303075.1_ASM230307v1	-	7496-D/ST9
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.02383	47.5	-	MSGH01	96	3819	3674	3/31/17	4/6/17	Contig	Univ. of Maryland	SAMN06144954	GCA_002076165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/165/GCA_002076165.1_ASM207616v1	28219321	O7S
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.86653	68.1	-	LXAA01	77	7152	6582	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208696	GCA_001978985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/985/GCA_001978985.1_ASM197898v1	-	NAU35B-3
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.41364	50.7	-	CWTK01	366	5052	4126	7/16/15	2/24/17	Scaffold	SC	SAMEA3345055	GCA_001252215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/215/GCA_001252215.1_H14124064101	-	64101ss_1
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54062	38.3	-	FJJI01	62	3239	3088	2/20/16	3/27/17	Contig	SC	SAMEA2077751	GCA_900062665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/665/GCA_900062665.1_10625_2_89	-	2532STDY5467562
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05419	41.1	-	FIMN01	21	2067	1959	2/10/16	3/19/17	Contig	SC	SAMEA1566143	GCA_900049655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/655/GCA_900049655.1_8337_6_9	-	BM213a
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.06186	35.5	-	LCVE01	40	2134	1992	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435045	GCA_001016715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/715/GCA_001016715.1_ASM101671v1	25946017	ES-PW-085
Acinetobacter baumannii UH2907	1398969	PRJNA218770	218770	Proteobacteria	Gammaproteobacteria	4.04494	39	-	AYFS01	213	3952	3779	1/7/14	3/16/17	Contig	J. Craig Venter Institute	SAMN02597397	GCA_000516055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/055/GCA_000516055.1_gabuh2907_v01	24449752	UH2907
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.13151	65.8	-	JTXD01	160	6938	6707	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105480	GCA_000794785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/785/GCA_000794785.1_AZPAE14702	25367914	AZPAE14702
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.04436	52.1	-	CMZO01	195	2297	2047	3/22/15	3/17/17	Scaffold	SC	SAMEA1031648	GCA_001086285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/285/GCA_001086285.1_6714_4_10	-	NM2700
Helicobacter pylori SA173A	1345583	PRJEB4094	216051	Proteobacteria	delta/epsilon subdivisions	1.64779	38.9	-	CBOU01	82	1617	1448	9/21/13	3/24/17	Contig	MHH	SAMEA2272533	GCA_000476575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/575/GCA_000476575.1_SA173A	23898187	SA173A
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.11115	39.6	-	COEX02	167	2311	2102	3/23/15	3/5/17	Contig	SC	SAMEA1463141	GCA_001090565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/565/GCA_001090565.2_7622_5_64	-	MD5106
Escherichia coli	562	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.4391	50.4359	chromosome:NZ_CP018770.2/CP018770.2; plasmid pMCR-1-CT:NZ_CP018773.2/CP018773.2; plasmid unnamed1:NZ_CP018771.2/CP018771.2; plasmid unnamed2:NZ_CP018772.1/CP018772.1; plasmid unnamed4:NZ_CP018774.2/CP018774.2; plasmid unnamed5:NZ_CP018775.2/CP018775.2	-	6	5653	5228	1/6/17	5/18/17	Chromosome	CDC	SAMN06159501	GCA_001938625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/625/GCA_001938625.2_ASM193862v2	-	2016C-3936C1
Mycobacterium tuberculosis TKK_05MA_0010	1448491	PRJNA235496	235496	Terrabacteria group	Actinobacteria	4.44849	65.6	-	JJXC01	71	4350	4135	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585986	GCA_000652895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/895/GCA_000652895.1_Myco_tube_TKK_05MA_0010_V1	-	TKK_05MA_0010
Staphylococcus epidermidis 528m	1294272	PRJNA189500	189500	Terrabacteria group	Firmicutes	2.68752	31.7	-	APHT01	117	2538	2502	5/13/13	1/8/14	Contig	Research Institute of Physical-Chemical Medicine	SAMN02470856	GCA_000390345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/345/GCA_000390345.1_Step528m	-	528m
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.69313	35	-	NHVG01	100	6102	5617	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163258	GCA_002199975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/199/975/GCA_002199975.1_ASM219997v1	-	MOD1_Bc206
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.12888	37.7	-	JPCL01	33	3205	3104	7/15/14	2/26/17	Contig	Cornell University	SAMN02741625	GCA_000729135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/135/GCA_000729135.1_ASM72913v1	-	FSL R8-7833
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.74632	30.3	-	CUJG01	20	1865	1733	3/31/15	3/18/17	Contig	SC	SAMEA1010630	GCA_001232125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/125/GCA_001232125.1_7038_3_49	-	OXC6299
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120497	1412568	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007351.2/CP007351.2	-	1	4707	4445	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384289	GCA_000624595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/595/GCA_000624595.2_ASM62459v2	24786953	EC20120497
Staphylococcus aureus M1462	1158495	PRJNA88793	88793	Terrabacteria group	Firmicutes	2.93796	32.8	-	AIZO01	4	3086	2928	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809089	GCA_000363545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/545/GCA_000363545.1_Stap_aure_M1462_V1	-	M1462
Staphylococcus aureus M1463	1158496	PRJNA88795	88795	Terrabacteria group	Firmicutes	2.87505	32.8	-	AIZP01	11	3016	2831	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809090	GCA_000363565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/565/GCA_000363565.1_Stap_aure_M1463_V1	-	M1463
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120498	1412545	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68583	52.2	chromosome:NZ_CP007352.2/CP007352.2	-	1	4708	4445	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384266	GCA_000624615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/615/GCA_000624615.2_ASM62461v2	24786953	EC20120498
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.74511	30.3	-	CUTG01	15	1856	1721	3/31/15	3/18/17	Contig	SC	SAMEA1401020	GCA_001232145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/145/GCA_001232145.1_7213_3_24	-	OXC6567
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.0977	37.7	-	JPDA01	22	3203	3097	7/15/14	2/26/17	Contig	Cornell University	SAMN02741635	GCA_000729145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/145/GCA_000729145.1_ASM72914v1	-	FSL R8-8446
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.4788	35	-	NIQX01	136	5881	5402	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07205637	GCA_002200015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/015/GCA_002200015.1_ASM220001v1	-	MOD1_Bc203
Staphylococcus epidermidis 41tr	1294271	PRJNA189499	189499	Terrabacteria group	Firmicutes	2.68546	31.7	-	APHU01	100	2561	2502	5/13/13	1/8/14	Contig	Research Institute of Physical-Chemical Medicine	SAMN02470858	GCA_000390365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/365/GCA_000390365.1_Step41tr	-	41tr
Mycobacterium tuberculosis TKK_05MA_0011	1448492	PRJNA235497	235497	Terrabacteria group	Actinobacteria	4.43864	65.6	-	JJXB01	67	4331	4133	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585987	GCA_000652915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/915/GCA_000652915.1_Myco_tube_TKK_05MA_0011_V1	-	TKK_05MA_0011
Escherichia coli	562	PRJNA330764	330764	Proteobacteria	Gammaproteobacteria	4.86303	50.8376	chromosome:NZ_CP017980.1/CP017980.1; plasmid pGZ3_NDM5:NZ_CP017981.1/CP017981.1	-	2	5021	4630	5/10/17	5/22/17	Chromosome	Peking University People’s Hospital	SAMN05969695	GCA_002125925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/925/GCA_002125925.1_ASM212592v1	-	CH611_eco
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.10277	39.7	-	CNVO02	197	2236	1960	3/22/15	3/11/17	Contig	SC	SAMEA1032567	GCA_001090605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/605/GCA_001090605.2_6999_7_21	-	403790
Helicobacter pylori SA172A	1345581	PRJEB4092	216048	Proteobacteria	delta/epsilon subdivisions	1.61361	38.8	-	CBOY01	32	1583	1443	9/21/13	3/24/17	Contig	MHH	SAMEA2272632	GCA_000476595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/595/GCA_000476595.1_SA172A	23898187	SA172A
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.06799	52	-	CMXM01	132	2325	2066	3/22/15	3/21/17	Scaffold	SC	SAMEA1031722	GCA_001088805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/805/GCA_001088805.1_6714_1_5	-	NM1361
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.89238	66	-	JTXC01	201	6664	6368	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105481	GCA_000794805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/805/GCA_000794805.1_AZPAE14703	25367914	AZPAE14703
Acinetobacter baumannii UH2707	1398968	PRJNA218769	218769	Proteobacteria	Gammaproteobacteria	4.03953	39	-	AYFT01	236	3949	3784	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597398	GCA_000516075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/075/GCA_000516075.1_gabuh2707_v01	24449752	UH2707
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.01527	35.2	-	LCVC01	17	2088	1966	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435043	GCA_001016725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/725/GCA_001016725.1_ASM101672v1	25946017	ES-PW-068
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05821	41.1	-	FISL01	20	2062	1950	2/10/16	4/2/17	Contig	SC	SAMEA1566130	GCA_900049665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/665/GCA_900049665.1_8337_6_88	-	FX50_2
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54184	38.3	-	FJJJ01	61	3236	3092	2/20/16	3/27/17	Contig	SC	SAMEA2077744	GCA_900062675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/675/GCA_900062675.1_10625_2_66	-	2532STDY5467539
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.72366	50.7	-	CWZE01	383	5328	4546	7/16/15	2/24/17	Scaffold	SC	SAMEA2445749	GCA_001252235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/235/GCA_001252235.1_12971_8_58	-	H131740366
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.21328	68.1	-	LXAC01	181	7506	6877	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208699	GCA_001978995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/978/995/GCA_001978995.1_ASM197899v1	-	NAU44A-2
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.04234	47.5	-	MSGB01	102	3848	3691	3/31/17	4/6/17	Contig	Univ. of Maryland	SAMN06144960	GCA_002076235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/235/GCA_002076235.1_ASM207623v1	28219321	TEM/25/01-004
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.32929	28.6	-	MPFR01	224	4057	3877	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710957	GCA_002303085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/085/GCA_002303085.1_ASM230308v1	-	7494-E/ST6
Vibrio parahaemolyticus	670	PRJNA288141	288141	Proteobacteria	Gammaproteobacteria	5.24584	45.2	-	LFWI01	70	5055	4824	8/14/15	3/26/17	Contig	Health Canada	SAMN03795181	GCA_001267655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/655/GCA_001267655.1_ASM126765v1	-	RM-17-6
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.63404	57	-	LEWC01	2	5597	5304	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280264	GCA_001031475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/475/GCA_001031475.1_Kleb_pneu_CHS121_V1	-	CHS121
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.81577	37.4	-	JUVH01	150	2818	2706	7/10/15	3/26/17	Contig	University of Washington	SAMN03197937	GCA_001058195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/195/GCA_001058195.1_ASM105819v1	26230489	732_EFLS
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.09309	52.6	-	CQNT01	79	2453	2123	3/23/15	4/11/17	Scaffold	SC	SAMEA1677433	GCA_001130585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/585/GCA_001130585.1_8727_5_76	-	GCGS226
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.0459	37.9	-	LNMO01	143	3199	2895	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270960	GCA_001547445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/445/GCA_001547445.1_ASM154744v1	-	VRE-1404192
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.77062	67.7	-	CSQD01	751	3804	3129	3/22/15	3/26/17	Scaffold	SC	SAMEA751130	GCA_001196855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/855/GCA_001196855.1_5515_7_10	-	B004
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68865	31.3	-	FBHB01	40	1745	1647	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683249	GCA_001491655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/655/GCA_001491655.1_UNES9	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.74528	55.8	-	FKCC01	56	4692	4446	4/6/16	3/28/17	Scaffold	SC	SAMEA2273456	GCA_900076585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/585/GCA_900076585.1_12045_5_35	-	e2414
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.07041	64.1	-	FSIZ01	18	5051	4943	12/14/16	3/21/17	Contig	SC	SAMEA2069317	GCA_900136535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/535/GCA_900136535.1_10208_3_79	-	504
Pseudomonas sp. 44 R 15	1844105	PRJEB9508	335877	Proteobacteria	Gammaproteobacteria	6.10645	60.5	-	CVTU01	122	5510	5217	7/29/16	4/13/17	Scaffold	"JOHN INNES CENTRE, NORWICH, UK."	SAMEA3442630	GCA_900004965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/004/965/GCA_900004965.1_PSEFL294_LIB5410	-	-
Streptomyces sp. TSRI0107	1703942	PRJNA293172	293172	Terrabacteria group	Actinobacteria	8.74048	72.1	-	LIVZ01	30	7784	7367	12/15/16	3/14/17	Scaffold	The Scripps Research Institute	SAMN03999391	GCA_001905845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/845/GCA_001905845.1_ASM190584v1	27999165	TSRI0107
Streptomyces sp. CB01883	1703943	PRJNA293172	293172	Terrabacteria group	Actinobacteria	8.89509	72.2	-	LIWA01	18	8095	7675	12/15/16	3/15/17	Scaffold	The Scripps Research Institute	SAMN03999392	GCA_001905855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/855/GCA_001905855.1_ASM190585v1	27999165	CB01883
Pseudomonas sp. 34 E 7	1844102	PRJEB9508	335877	Proteobacteria	Gammaproteobacteria	6.34465	60.4	-	CVTX01	197	5881	5437	7/29/16	4/13/17	Scaffold	"JOHN INNES CENTRE, NORWICH, UK."	SAMEA3442627	GCA_900005715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/005/715/GCA_900005715.1_PSEFL294_LIB5407	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.28456	64.2	-	FSJB01	35	5318	5168	12/14/16	3/21/17	Contig	SC	SAMEA2068741	GCA_900136545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/545/GCA_900136545.1_10208_3_81	-	506
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.02525	55.1	-	FKDH01	48	4940	4725	4/6/16	3/28/17	Scaffold	SC	SAMEA2273133	GCA_900076595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/595/GCA_900076595.1_12045_4_13	-	e242
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68703	31.3	-	FBIV01	23	1758	1665	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683298	GCA_001491695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/695/GCA_001491695.1_CCN71	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.81673	67.9	-	CSLZ01	460	3741	3249	3/22/15	3/26/17	Scaffold	SC	SAMEA751477	GCA_001196975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/975/GCA_001196975.1_5476_5_8	-	B046
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	2.84585	38.2	-	LNMU01	174	2954	2754	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270966	GCA_001547475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/475/GCA_001547475.1_ASM154747v1	-	VRE-1408033
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.15752	52.4	-	CQLA01	80	2539	2208	3/22/15	4/11/17	Scaffold	SC	SAMEA1690417	GCA_001130625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/625/GCA_001130625.1_8289_2_36	-	GCGS036
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.18909	37.2	-	JUUM01	292	3339	3148	7/10/15	3/26/17	Contig	University of Washington	SAMN03197958	GCA_001058285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/285/GCA_001058285.1_ASM105828v1	26230489	751_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.81054	56.9	-	LEWD01	5	5916	5637	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280265	GCA_001031485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/485/GCA_001031485.1_Kleb_pneu_CHS122_V1	-	CHS122
Vibrio parahaemolyticus	670	PRJNA288141	288141	Proteobacteria	Gammaproteobacteria	5.09832	45.3	-	LFZD01	106	4889	4654	8/18/15	3/26/17	Contig	Health Canada	SAMN03799832	GCA_001270125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/125/GCA_001270125.1_ASM127012v1	-	HS-13-1
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.39785	28.7	-	MPFT01	454	4112	3862	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710959	GCA_002303105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/105/GCA_002303105.1_ASM230310v1	-	7497-NonSp/novelST
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.02201	47.5	-	MSGD01	94	3818	3674	3/31/17	4/6/17	Contig	Univ. of Maryland	SAMN06144958	GCA_002076245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/245/GCA_002076245.1_ASM207624v1	28219321	O9S
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.13448	68.1	-	LXAB01	152	7422	6828	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208697	GCA_001979015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/015/GCA_001979015.1_ASM197901v1	-	NAU35B-4
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.77022	50.7	-	CWVI01	391	5346	4599	7/16/15	2/24/17	Scaffold	SC	SAMEA3345076	GCA_001252255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/255/GCA_001252255.1_Sg_201400855_TAGCTT_L001	-	201400855_1
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54041	38.3	-	FJJK01	61	3237	3090	2/20/16	3/27/17	Contig	SC	SAMEA2077786	GCA_900062685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/685/GCA_900062685.1_10625_2_93	-	2532STDY5467566
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05885	41.1	-	FISM01	21	2070	1965	2/10/16	3/19/17	Contig	SC	SAMEA1566111	GCA_900049675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/675/GCA_900049675.1_8337_6_90	-	FX59_4
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.12683	35.3	-	LCVO01	42	2196	2060	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435048	GCA_001016755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/755/GCA_001016755.1_ASM101675v1	25946017	ES-PW-118
Acinetobacter baumannii UH9907	1398991	PRJNA227028	227028	Proteobacteria	Gammaproteobacteria	4.34491	39.1062	plasmid pABUH1-74:NZ_AYOH01000010.1/AYOH01000010.2	AYOH01	11	4259	4048	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597375	GCA_000516095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/095/GCA_000516095.2_gabuh99pb_v01	24449752	UH9907
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.28253	66.5	-	JTXB01	123	6011	5809	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105482	GCA_000794825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/825/GCA_000794825.1_AZPAE14704	25367914	AZPAE14704
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05249	52.1	-	CMYN01	149	2296	2033	3/22/15	3/21/17	Scaffold	SC	SAMEA1031731	GCA_001089325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/325/GCA_001089325.1_6714_3_13	-	NM2254
Helicobacter pylori SA233C	1345528	PRJEB4122	215923	Proteobacteria	delta/epsilon subdivisions	1.58147	38.7	-	CBPD01	43	1536	1409	9/21/13	3/24/17	Contig	MHH	SAMEA2272033	GCA_000476615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/615/GCA_000476615.1_SA233C	23898187	SA233C
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07896	39.6	-	CKIY01	64	2267	2009	3/21/15	3/11/17	Contig	SC	SAMEA1023987	GCA_001090665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/665/GCA_001090665.1_6631_4_22	-	type strain: N
Escherichia coli	562	PRJNA392583	392583	Proteobacteria	Gammaproteobacteria	4.68624	50.8	chromosome:NZ_CP022414.1/CP022414.1	-	1	4876	4509	7/20/17	7/22/17	Chromosome	National University of Singapore	SAMN07303086	GCA_002222535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/222/535/GCA_002222535.1_ASM222253v1	-	AT01
Mycobacterium tuberculosis TKK_05MA_0012	1448493	PRJNA235498	235498	Terrabacteria group	Actinobacteria	4.40282	65.6	-	JJXA01	90	4341	4127	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585988	GCA_000652935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/935/GCA_000652935.1_Myco_tube_TKK_05MA_0012_V1	-	TKK_05MA_0012
Staphylococcus epidermidis 36-1	1248411	PRJNA178533	178533	Terrabacteria group	Firmicutes	2.71464	31.8	-	APHS01	447	2677	2642	5/13/13	1/8/14	Contig	Research Institute of Physical-Chemical Medicine	SAMN02470857	GCA_000390405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/405/GCA_000390405.1_Step36-1	-	36-1
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	6.31453	34.7	-	NIQY01	277	6800	6367	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07205618	GCA_002200055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/055/GCA_002200055.1_ASM220005v1	-	MOD1_Bc235
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.12314	37.7	-	JPDE01	49	3223	3122	7/15/14	2/26/17	Contig	Cornell University	SAMN02741631	GCA_000729185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/185/GCA_000729185.1_ASM72918v1	-	FSL R8-7881
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.61966	30.5	-	CUWB01	14	1691	1594	3/31/15	3/18/17	Contig	SC	SAMEA1400919	GCA_001232165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/165/GCA_001232165.1_7213_3_96	-	OXC6641
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120505	1412544	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68583	52.2	chromosome:NZ_CP007353.2/CP007353.2	-	1	4708	4447	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384265	GCA_000624635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/635/GCA_000624635.2_ASM62463v2	24786953	EC20120505
Staphylococcus aureus M1481	1158497	PRJNA88901	88901	Terrabacteria group	Firmicutes	2.86809	32.8	-	AJBO01	9	3019	2853	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809155	GCA_000363585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/585/GCA_000363585.1_Stap_aure_M1481_V1	-	M1481
Staphylococcus aureus M1510	1169277	PRJNA158803	158803	Terrabacteria group	Firmicutes	2.92939	32.9	-	AOBJ01	6	3081	2914	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00839762	GCA_000363605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/605/GCA_000363605.1_Stap_aure_M1510_V1	-	M1510
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120528	1412537	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68583	52.2	chromosome:NZ_CP007354.2/CP007354.2	-	1	4709	4450	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384258	GCA_000624655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/655/GCA_000624655.2_ASM62465v2	24786953	EC20120528
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64598	30.5	-	CUUQ01	18	1713	1615	3/31/15	3/18/17	Contig	SC	SAMEA1401582	GCA_001232205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/205/GCA_001232205.1_7213_3_6	-	OXC6549
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09501	37.9	-	JPDF01	23	3147	3043	7/15/14	2/26/17	Contig	Cornell University	SAMN02741630	GCA_000729195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/195/GCA_000729195.1_ASM72919v1	-	FSL R8-7870
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.64342	35.2	-	NIQZ01	123	6130	5789	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07205619	GCA_002200075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/075/GCA_002200075.1_ASM220007v1	-	MOD1_Bc234
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.5814	37.5	-	JWEE01	2883	-	-	7/10/15	7/13/16	Contig	University of Washington	SAMN03197030	GCA_001068615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/615/GCA_001068615.1_ASM106861v1	26230489	1068_SEPI
Mycobacterium tuberculosis TKK_05MA_0016	1448495	PRJNA235500	235500	Terrabacteria group	Actinobacteria	4.40963	65.6	-	JJWZ01	76	4326	4135	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585990	GCA_000652955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/955/GCA_000652955.1_Myco_tube_TKK_05MA_0016_V1	-	TKK_05MA_0016
Escherichia coli	562	PRJNA252455	252455	Proteobacteria	Gammaproteobacteria	4.5678	50.7	chromosome:CP022466.1	-	1	4780	4454	7/27/17	7/27/17	Chromosome	Universidad de los Andes	SAMN02850627	GCA_002234555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/234/555/GCA_002234555.1_ASM223455v1	-	DS1
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	1.94278	39.8	-	CMDK01	45	2124	1912	3/21/15	3/11/17	Contig	SC	SAMEA1029056	GCA_001090685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/685/GCA_001090685.1_7011_3_19	-	SMRU2755
Helicobacter pylori SA30A	1345506	PRJEB4041	215905	Proteobacteria	delta/epsilon subdivisions	1.67039	38.9	-	CBPQ01	64	1643	1431	9/21/13	3/24/17	Contig	MHH	SAMEA2272413	GCA_000476635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/635/GCA_000476635.1_SA30A	23898187	SA30A
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05274	52.1	-	CMZK01	165	2301	2049	3/22/15	3/21/17	Scaffold	SC	SAMEA1031678	GCA_001090365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/365/GCA_001090365.1_6714_3_7	-	NM2206
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.80246	66.2	-	JTWH01	105	6577	6350	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105502	GCA_000794845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/845/GCA_000794845.1_AZPAE14725	25367914	AZPAE14725
Acinetobacter baumannii UH10707	1398949	PRJNA227030	227030	Proteobacteria	Gammaproteobacteria	4.1562	39.2016	plasmid pABUH5-114:NZ_AYOI01000002.1/AYOI01000002.1	AYOI01	9	4077	3839	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597423	GCA_000516115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/115/GCA_000516115.1_gabuh107pb_v01	24449752	UH10707
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.05722	35.2	-	LCVF01	25	2087	1966	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435046	GCA_001016775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/775/GCA_001016775.1_ASM101677v1	25946017	ES-PW-087
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.0514	41.1	-	FISX01	31	2063	1949	2/10/16	3/19/17	Contig	SC	SAMEA1566156	GCA_900049685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/685/GCA_900049685.1_8525_5_4	-	FX275
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54039	38.3	-	FJJM01	58	3235	3089	2/20/16	3/27/17	Contig	SC	SAMEA1972901	GCA_900062695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/695/GCA_900062695.1_10625_3_3	-	2532STDY5467572
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.66116	50.7	-	CXLB01	500	5264	4486	7/16/15	2/24/17	Scaffold	SC	SAMEA2003444	GCA_001252275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/275/GCA_001252275.1_8290_4_54	-	109295
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.21419	68.1	-	LXAD01	132	7483	6898	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208700	GCA_001979045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/045/GCA_001979045.1_ASM197904v1	-	NAU44A-6
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.04428	47.5	-	MSGC01	108	3844	3691	3/31/17	4/6/17	Contig	Univ. of Maryland	SAMN06144959	GCA_002076255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/255/GCA_002076255.1_ASM207625v1	28219321	O2
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.27796	28.7	-	MPFU01	186	4050	3885	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710960	GCA_002303125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/125/GCA_002303125.1_ASM230312v1	-	7498-M/ST15
Vibrio parahaemolyticus	670	PRJNA288141	288141	Proteobacteria	Gammaproteobacteria	5.11393	45.3	-	LFZB01	90	4919	4676	8/18/15	3/26/17	Contig	Health Canada	SAMN03800013	GCA_001270145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/145/GCA_001270145.1_ASM127014v1	-	S499-7
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.79309	56.9	-	LEWE01	12	5879	5614	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280266	GCA_001031515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/515/GCA_001031515.1_Kleb_pneu_CHS123_V1	-	CHS123
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.98227	37.2	-	JUUJ01	326	3074	2887	7/10/15	3/26/17	Contig	University of Washington	SAMN03197961	GCA_001058335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/335/GCA_001058335.1_ASM105833v1	26230489	754_EFLS
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.13518	52.5	-	CQKO01	72	2489	2175	3/22/15	4/10/17	Scaffold	SC	SAMEA1690407	GCA_001133565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/565/GCA_001133565.1_8727_8_50	-	GCGS146
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	2.76158	38	-	LNMW01	143	2846	2675	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270968	GCA_001547495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/495/GCA_001547495.1_ASM154749v1	-	VRE-1408429
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.70621	67.6	-	CSOC01	952	3746	3018	3/23/15	3/26/17	Scaffold	SC	SAMEA751255	GCA_001196995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/995/GCA_001196995.1_5601_3_3	-	B326
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.69294	31.3	-	FBQI01	50	1774	1679	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683492	GCA_001491715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/715/GCA_001491715.1_H063800417	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.84102	55.6	-	FKDG01	62	4765	4518	4/6/16	3/28/17	Scaffold	SC	SAMEA2273473	GCA_900076605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/605/GCA_900076605.1_12045_5_53	-	e247
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.1878	64.2	-	FSIW01	33	5193	5038	12/14/16	3/21/17	Contig	SC	SAMEA2068740	GCA_900136555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/555/GCA_900136555.1_10208_3_78	-	503
Pseudomonas sp. 31 E 5	1844099	PRJEB9508	335877	Proteobacteria	Gammaproteobacteria	5.87094	60.8	-	CVTM01	50	5398	5220	7/29/16	4/13/17	Scaffold	"JOHN INNES CENTRE, NORWICH, UK."	SAMEA3442624	GCA_900005815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/005/815/GCA_900005815.1_PSEFL294_LIB5403	-	-
Streptomyces sp. CB03234	1703937	PRJNA293172	293172	Terrabacteria group	Actinobacteria	7.76909	71.9	-	LIYH01	13	7102	6792	12/15/16	3/15/17	Scaffold	The Scripps Research Institute	SAMN03999386	GCA_001905885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/885/GCA_001905885.1_ASM190588v1	27999165	CB03234
Streptomyces sp. CB02366	1703935	PRJNA293172	293172	Terrabacteria group	Actinobacteria	7.36925	72.5	-	LIVT01	44	6504	6159	12/15/16	3/15/17	Scaffold	The Scripps Research Institute	SAMN03999384	GCA_001905905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/905/GCA_001905905.1_ASM190590v1	27999165	CB02366
Pseudomonas sp. 58 R 12	1844107	PRJEB9508	335877	Proteobacteria	Gammaproteobacteria	6.2612	59.9	-	CVTP01	28	5827	5593	7/29/16	4/13/17	Scaffold	"JOHN INNES CENTRE, NORWICH, UK."	SAMEA3442632	GCA_900005865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/005/865/GCA_900005865.1_PSEFL294_LIB5412	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.27956	64.1	-	FSIV01	30	5342	5184	12/14/16	3/21/17	Contig	SC	SAMEA2069315	GCA_900136565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/565/GCA_900136565.1_10208_3_73	-	498
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.08028	54.8	-	FKBZ01	48	5004	4747	4/6/16	3/28/17	Scaffold	SC	SAMEA2273458	GCA_900076615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/615/GCA_900076615.1_12045_5_37	-	e2433
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.73379	31.2	-	FBBN01	18	1824	1730	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683101	GCA_001491735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/735/GCA_001491735.1_EC6158	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.70907	67.6	-	CSPB01	1005	3792	2986	3/22/15	3/26/17	Scaffold	SC	SAMEA751453	GCA_001197455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/455/GCA_001197455.1_5515_6_1	-	B113
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	2.47976	38.3	-	LNMX01	133	2526	2388	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270969	GCA_001547505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/505/GCA_001547505.1_ASM154750v1	-	VRE-1408535
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14186	52.4	-	CQJF01	85	2514	2185	3/23/15	4/11/17	Scaffold	SC	SAMEA1690460	GCA_001135185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/185/GCA_001135185.1_8289_2_49	-	GCGS049
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.95563	37.2	-	JUQC01	182	3033	2895	7/10/15	3/26/17	Contig	University of Washington	SAMN03198072	GCA_001058665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/665/GCA_001058665.1_ASM105866v1	26230489	864_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.95839	56.9	-	LEWG01	7	6076	5786	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280269	GCA_001031545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/545/GCA_001031545.1_Kleb_pneu_CHS126_V1	-	CHS126
Vibrio parahaemolyticus	670	PRJNA288141	288141	Proteobacteria	Gammaproteobacteria	5.18157	45.2	-	LFZE01	102	5043	4803	8/18/15	3/26/17	Contig	Health Canada	SAMN03799853	GCA_001270215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/215/GCA_001270215.1_ASM127021v1	-	S487-4
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.27735	28.7	-	MPFV01	492	4040	3775	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710961	GCA_002303155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/155/GCA_002303155.1_ASM230315v1	-	7499-CF/ST37
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.02542	47.5	-	MSEN01	99	3821	3681	3/31/17	4/6/17	Contig	Univ. of Maryland	SAMN06144938	GCA_002076455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/455/GCA_002076455.1_ASM207645v1	28219321	OO4
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.25475	68.1	-	LXAE01	197	7577	6901	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208701	GCA_001979065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/065/GCA_001979065.1_ASM197906v1	-	NAU44A-9
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.36402	50.8	-	CXDN01	371	4643	4158	7/16/15	2/24/17	Scaffold	SC	SAMEA954745	GCA_001252295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/295/GCA_001252295.1_5236_8_10	-	Sh36224_441098
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54211	38.3	-	FJJO01	63	3234	3090	2/20/16	3/27/17	Contig	SC	SAMEA2077977	GCA_900062705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/705/GCA_900062705.1_10625_3_39	-	2532STDY5467608
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.11647	41.1	-	FIHU01	50	2157	2014	2/10/16	3/19/17	Contig	SC	SAMEA1316571	GCA_900049945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/945/GCA_900049945.1_7114_5_72	-	LSS72
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.04149	35.3	-	LCVN01	34	2103	1924	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435047	GCA_001016795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/795/GCA_001016795.1_ASM101679v1	25946017	ES-PW-088
Acinetobacter baumannii UH5107	1398971	PRJNA218772	218772	Proteobacteria	Gammaproteobacteria	4.00622	38.9	-	AYFQ01	135	3881	3724	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597395	GCA_000516135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/135/GCA_000516135.1_gabuh5107_v01	24449752	UH5107
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.88527	65.8	-	JTWG01	164	6675	6460	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105503	GCA_000794865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/865/GCA_000794865.1_AZPAE14726	25367914	AZPAE14726
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.06435	52	-	CNAD01	124	2330	2045	3/22/15	3/21/17	Scaffold	SC	SAMEA1031740	GCA_001091005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/005/GCA_001091005.1_6731_8_3	-	NM3128
Helicobacter pylori SA303C	1345551	PRJEB4135	216082	Proteobacteria	delta/epsilon subdivisions	1.63834	38.6	-	CBMW01	88	1587	1419	9/21/13	3/24/17	Contig	MHH	SAMEA2272201	GCA_000476655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/655/GCA_000476655.1_SA303C	23898187	SA303C
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.0729	39.5	-	CPTH01	68	2248	2027	3/23/15	3/11/17	Contig	SC	SAMEA1020579	GCA_001090705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/705/GCA_001090705.1_5749_6_9	-	LMG90
Escherichia coli	562	PRJNA401211	401211	Proteobacteria	Gammaproteobacteria	5.32063	50.6	chromosome:CP023200.1	-	1	4970	4667	9/12/17	9/12/17	Chromosome	IVRI	SAMN07599867	GCA_002290225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/225/GCA_002290225.1_ASM229022v1	-	646
Mycobacterium tuberculosis TKK_05MA_0017	1448496	PRJNA235501	235501	Terrabacteria group	Actinobacteria	4.39036	65.6	-	JJWY01	83	4327	4108	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585991	GCA_000652975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/975/GCA_000652975.1_Myco_tube_TKK_05MA_0017_V1	-	TKK_05MA_0017
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	4.38758	36	-	JUNI01	565	-	-	7/10/15	7/13/16	Contig	University of Washington	SAMN03198144	GCA_001075745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/745/GCA_001075745.1_ASM107574v1	26230489	926_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.70042	35.3	-	NIRE01	199	6209	5843	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07205615	GCA_002200125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/125/GCA_002200125.1_ASM220012v1	-	MOD1_Bc225
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	2.88715	37.9	-	JPCG01	23	2900	2817	7/15/14	2/26/17	Contig	Cornell University	SAMN02741620	GCA_000729225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/225/GCA_000729225.1_ASM72922v1	-	FSL R8-7806
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.63785	30.5	-	CUJA01	16	1724	1634	3/31/15	3/18/17	Contig	SC	SAMEA1010574	GCA_001232265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/265/GCA_001232265.1_7038_3_43	-	OXC6293
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120994	1412569	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.6864	52.2	chromosome:NZ_CP007365.1/CP007365.2	-	1	4707	4446	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384290	GCA_000624675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/675/GCA_000624675.2_ASM62467v2	24786953	EC20120994
Staphylococcus aureus M1520	1158498	PRJNA88903	88903	Terrabacteria group	Firmicutes	2.84618	32.9	-	AJBP01	2	2943	2790	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809166	GCA_000363625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/625/GCA_000363625.1_Stap_aure_M1520_V1	-	M1520
Staphylococcus aureus M1521	1158499	PRJNA88905	88905	Terrabacteria group	Firmicutes	2.91817	33	-	AJBQ01	6	3054	2887	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809177	GCA_000363645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/645/GCA_000363645.1_Stap_aure_M1521_V1	-	M1521
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121004	1412530	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68583	52.2	chromosome:NZ_CP007366.1/CP007366.2	-	1	4707	4448	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384251	GCA_000624695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/695/GCA_000624695.2_ASM62469v2	24786953	EC20121004
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.75969	30.2	-	CUSY01	19	1842	1693	3/31/15	3/18/17	Contig	SC	SAMEA1401134	GCA_001232365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/365/GCA_001232365.1_7213_3_17	-	OXC6560
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.10614	37.8	-	JPCH01	26	3200	3089	7/15/14	2/26/17	Contig	Cornell University	SAMN02741621	GCA_000729235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/235/GCA_000729235.1_ASM72923v1	-	FSL R8-7812
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.77571	35.4	-	NIRA01	150	6280	5946	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07205620	GCA_002200145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/145/GCA_002200145.1_ASM220014v1	-	MOD1_Bc233
Staphylococcus epidermidis	1282	PRJNA289935	289935	Terrabacteria group	Firmicutes	2.47616	31.8	-	LGJG01	42	2342	2153	9/24/15	9/24/15	Contig	Hasselt University	SAMN03859970	GCA_001298115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/298/115/GCA_001298115.1_ASM129811v1	-	ST14
Mycobacterium tuberculosis TKK_05MA_0018	1448497	PRJNA235502	235502	Terrabacteria group	Actinobacteria	4.40423	65.6	-	JJWX01	69	4306	4128	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585992	GCA_000652995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/652/995/GCA_000652995.1_Myco_tube_TKK_05MA_0018_V1	-	TKK_05MA_0018
Escherichia coli	562	PRJNA401213	401213	Proteobacteria	Gammaproteobacteria	4.74838	50.7	chromosome:CP023201.1	-	1	4721	4448	9/12/17	9/12/17	Chromosome	IVRI	SAMN07599872	GCA_002290265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/265/GCA_002290265.1_ASM229026v1	-	360/16
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.16029	39.7	-	CNVE02	206	2299	2026	3/23/15	3/11/17	Contig	SC	SAMEA1032637	GCA_001090745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/745/GCA_001090745.2_6999_6_6	-	255210
Helicobacter pylori SA168A	1345573	PRJEB4084	216042	Proteobacteria	delta/epsilon subdivisions	1.6422	39	-	CBPU01	74	1636	1443	9/21/13	3/24/17	Contig	MHH	SAMEA2272590	GCA_000476675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/675/GCA_000476675.1_SA168A	23898187	SA168A
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05764	52	-	CNAG01	113	2314	2030	3/23/15	3/21/17	Scaffold	SC	SAMEA1031728	GCA_001092105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/105/GCA_001092105.1_6731_8_2	-	NM2935
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.36249	65.6	-	JTWF01	248	7221	6831	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105504	GCA_000794885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/885/GCA_000794885.1_AZPAE14727	25367914	AZPAE14727
Acinetobacter baumannii UH5207	1398972	PRJNA218773	218773	Proteobacteria	Gammaproteobacteria	4.00946	39	-	AYFP01	59	3823	3680	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597394	GCA_000516155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/155/GCA_000516155.1_gabuh5207_v01	24449752	UH5207
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.01567	35.2	-	LCVR01	19	2059	1944	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435051	GCA_001016815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/815/GCA_001016815.1_ASM101681v1	25946017	ES-PW-153
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.23207	41.3	-	FIHY01	39	2182	2061	2/10/16	3/19/17	Contig	SC	SAMEA1316652	GCA_900049955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/955/GCA_900049955.1_7114_5_75	-	LSS75
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54098	38.3	-	FJJN01	65	3240	3087	2/20/16	3/27/17	Contig	SC	SAMEA2080688	GCA_900062715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/715/GCA_900062715.1_10625_2_91	-	2532STDY5467564
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.92742	50.5	-	CWXF01	489	5732	4719	7/16/15	2/24/17	Scaffold	SC	SAMEA2434382	GCA_001252335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/335/GCA_001252335.1_12844_1_55	-	20412581
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.21507	68.1	-	LXAF01	174	7456	6824	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208702	GCA_001979085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/085/GCA_001979085.1_ASM197908v1	-	MSHR0099
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.0229	47.5	-	MSEY01	103	3818	3675	3/31/17	4/6/17	Contig	Univ. of Maryland	SAMN06144950	GCA_002076485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/485/GCA_002076485.1_ASM207648v1	28219321	47623
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.12905	28.5	-	MPFW01	148	3789	3637	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710962	GCA_002303165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/165/GCA_002303165.1_ASM230316v1	-	7501-BI/ST1
Vibrio parahaemolyticus	670	PRJNA288141	288141	Proteobacteria	Gammaproteobacteria	5.13878	45.2	-	LFZF01	111	4978	4712	8/18/15	3/26/17	Contig	Health Canada	SAMN03799842	GCA_001270235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/235/GCA_001270235.1_ASM127023v1	-	S440-7
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.73574	56.9	-	LEWF01	7	5806	5532	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280268	GCA_001031555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/555/GCA_001031555.1_Kleb_pneu_CHS125_V1	-	CHS125
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.79543	37.5	-	JUPP01	171	2786	2652	7/10/15	3/26/17	Contig	University of Washington	SAMN03198085	GCA_001058715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/715/GCA_001058715.1_ASM105871v1	26230489	879_EFLS
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.09687	52.6	-	CQJT01	70	2466	2130	3/23/15	4/11/17	Scaffold	SC	SAMEA1690347	GCA_001135245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/245/GCA_001135245.1_8727_8_96	-	GCGS192
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	2.23612	38.5	-	LNLC01	138	2298	2144	2/2/16	3/27/17	Contig	Uppsala University	SAMN04270922	GCA_001547555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/555/GCA_001547555.1_ASM154755v1	-	S-1001508
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.77111	67.8	-	CSPK01	648	3755	3157	3/22/15	3/26/17	Scaffold	SC	SAMEA751296	GCA_001197495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/495/GCA_001197495.1_5476_2_7	-	B260
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66086	31.4	-	FBNJ01	42	1720	1620	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683431	GCA_001491755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/755/GCA_001491755.1_H063540531	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.01401	54.8	-	FKCB01	39	4923	4664	4/6/16	3/28/17	Scaffold	SC	SAMEA2273508	GCA_900076625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/625/GCA_900076625.1_12045_5_79	-	e2473
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.26488	64.2	-	FSJA01	84	5297	5120	12/14/16	3/21/17	Contig	SC	SAMEA2071625	GCA_900136575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/575/GCA_900136575.1_10208_3_80	-	505
Pseudomonas sp. 24 E 1	1844094	PRJEB9508	335877	Proteobacteria	Gammaproteobacteria	6.37913	60	-	CVTG01	40	5942	5748	7/29/16	4/13/17	Scaffold	"JOHN INNES CENTRE, NORWICH, UK."	SAMEA3442619	GCA_900005875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/005/875/GCA_900005875.1_PSEFL294_LIB5397	-	-
Streptomyces sp. IMTB 2501	1776340	PRJNA308042	308042	Terrabacteria group	Actinobacteria	9.98949	70.7	-	MQUS01	94	9204	8394	1/18/17	3/15/17	Scaffold	Institute of Microbial Technology	SAMN04386227	GCA_001953885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/885/GCA_001953885.1_ASM195388v1	-	IMTB 2501
Streptomyces sp. M1013	549798	PRJNA355554	355554	Terrabacteria group	Actinobacteria	8.44828	72.1	-	MQUH01	43	7781	7364	1/24/17	3/15/17	Scaffold	Institute for Integrative Biology of the Cell	SAMN06077062	GCA_001970135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/970/135/GCA_001970135.1_ASM197013v1	-	M1013
Pseudomonas sp. 31 E 6	1844100	PRJEB9508	335877	Proteobacteria	Gammaproteobacteria	5.93596	60.7	-	CVTL01	49	5458	5273	7/29/16	4/13/17	Scaffold	"JOHN INNES CENTRE, NORWICH, UK."	SAMEA3442625	GCA_900005935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/005/935/GCA_900005935.1_PSEFL294_LIB5404	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.00981	64.2	-	FVNI01	25	5005	4882	3/10/17	3/18/17	Contig	SC	SAMEA1963837	GCA_900136605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/605/GCA_900136605.1_10208_3_84	-	509
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.77412	55.6	-	FKCV01	30	4625	4389	4/6/16	3/28/17	Scaffold	SC	SAMEA2273134	GCA_900076635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/635/GCA_900076635.1_12045_4_14	-	e248
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68623	31.3	-	FBJS01	24	1756	1661	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683318	GCA_001491775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/775/GCA_001491775.1_CCN292	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.80782	67.9	-	CSNN01	335	3679	3294	3/23/15	3/26/17	Scaffold	SC	SAMEA751263	GCA_001197815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/815/GCA_001197815.1_5633_3_12	-	B197
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	2.90939	38.1	-	LNOW01	145	3029	2828	2/17/16	3/27/17	Contig	Uppsala University	SAMN04270973	GCA_001562895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/895/GCA_001562895.1_ASM156289v1	-	VRE-1502939
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.09335	52.6	-	CQLZ01	88	2458	2130	3/23/15	4/11/17	Scaffold	SC	SAMEA1690333	GCA_001135285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/285/GCA_001135285.1_8289_2_18	-	GCGS018
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.98506	37.2	-	JUXT01	225	3083	2921	7/10/15	3/26/17	Contig	University of Washington	SAMN03197873	GCA_001058855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/855/GCA_001058855.1_ASM105885v1	26230489	670_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.75589	56.9	-	LEWH01	8	5840	5544	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280270	GCA_001031565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/565/GCA_001031565.1_Kleb_pneu_CHS127_V1	-	CHS127
Vibrio parahaemolyticus	670	PRJNA288141	288141	Proteobacteria	Gammaproteobacteria	5.04296	45.3	-	LFZG01	95	4819	4601	8/18/15	3/26/17	Contig	Health Canada	SAMN03799835	GCA_001270285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/285/GCA_001270285.1_ASM127028v1	-	ISF-77-01
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.12827	28.7	-	MPFX01	258	3834	3661	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710963	GCA_002303185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/185/GCA_002303185.1_ASM230318v1	-	7503-Y/ST2
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.02219	47.5	-	MSFB01	99	3807	3668	3/31/17	4/6/17	Contig	Univ. of Maryland	SAMN06144947	GCA_002076645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/645/GCA_002076645.1_ASM207664v1	28219321	47610
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.21682	68.1	-	LXAG01	158	7436	6827	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208703	GCA_001979105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/105/GCA_001979105.1_ASM197910v1	-	MSHR0073
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.38277	50.9	-	CXCV01	321	4706	4245	7/17/15	2/24/17	Scaffold	SC	SAMEA954703	GCA_001252355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/355/GCA_001252355.1_5236_6_7	-	Sh1265_440935
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54134	38.3	-	FJJQ01	56	3245	3089	2/20/16	3/27/17	Contig	SC	SAMEA2080693	GCA_900062725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/725/GCA_900062725.1_10625_3_17	-	2532STDY5467586
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.15278	41	-	FIJZ01	84	2216	2064	2/10/16	3/19/17	Contig	SC	SAMEA1316612	GCA_900049965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/965/GCA_900049965.1_7054_7_34	-	SS1030
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.08032	35.4	-	LCVP01	18	2146	2027	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435049	GCA_001016835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/835/GCA_001016835.1_ASM101683v1	25946017	ES-PW-121
Acinetobacter baumannii UH5307	1398973	PRJNA218774	218774	Proteobacteria	Gammaproteobacteria	4.19943	39	-	AYFO01	113	4113	3964	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597393	GCA_000516175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/175/GCA_000516175.1_gabuh5307_v01	24449752	UH5307
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.35642	65.6	-	JTWE01	217	7223	6858	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105505	GCA_000794905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/905/GCA_000794905.1_AZPAE14728	25367914	AZPAE14728
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05657	52.1	-	CMYW01	237	2298	2056	3/23/15	3/17/17	Scaffold	SC	SAMEA1031689	GCA_001097185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/185/GCA_001097185.1_6714_3_23	-	NM2393
Helicobacter pylori SA158C	1345559	PRJEB4070	216028	Proteobacteria	delta/epsilon subdivisions	1.61418	39.1	-	CBPY01	55	1589	1417	9/21/13	3/24/17	Contig	MHH	SAMEA2272717	GCA_000476695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/695/GCA_000476695.1_SA158C	23898187	SA158C
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08943	39.7	-	CLVN01	66	2314	2090	3/21/15	3/11/17	Contig	SC	SAMEA1026121	GCA_001090805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/805/GCA_001090805.1_6983_3_63	-	SMRU2271
Escherichia coli	562	PRJNA315511	315511	Proteobacteria	Gammaproteobacteria	4.6719	50.6	chromosome:CP017061.1	-	1	-	-	9/12/17	9/12/17	Chromosome	ICAR-National Institute of Veterinary Epidemiology and Disease Informatics	SAMN04563602	GCA_002290325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/325/GCA_002290325.1_ASM229032v1	-	NIVEDI C53
Mycobacterium tuberculosis TKK_05MA_0020	1448498	PRJNA235503	235503	Terrabacteria group	Actinobacteria	4.41027	65.6	-	JJWW01	84	4325	4122	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585993	GCA_000653015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/015/GCA_000653015.1_Myco_tube_TKK_05MA_0020_V1	-	TKK_05MA_0020
Staphylococcus epidermidis JCM 2414	1236978	PRJDB677	243659	Terrabacteria group	Firmicutes	2.30268	32.1	-	BAZV01	44	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000465	GCA_001310935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/935/GCA_001310935.1_ASM131093v1	-	JCM 2414
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	6.41764	34.7	-	NIRB01	306	6912	6466	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07205609	GCA_002200175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/175/GCA_002200175.1_ASM220017v1	-	MOD1_Bc231
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.13799	37.8	-	JPCJ01	39	3258	3136	7/15/14	2/26/17	Contig	Cornell University	SAMN02741623	GCA_000729245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/245/GCA_000729245.1_ASM72924v1	-	FSL R8-7825
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.68654	30.3	-	CUHN01	11	1765	1634	3/31/15	3/18/17	Contig	SC	SAMEA1010387	GCA_001232405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/405/GCA_001232405.1_7038_3_1	-	OXC6250
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121541	1412525	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68598	52.2	chromosome:NZ_CP007367.1/CP007367.2	-	1	4708	4447	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384246	GCA_000624715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/715/GCA_000624715.2_ASM62471v2	24786953	EC20121541
Staphylococcus aureus M1531	1158500	PRJNA88907	88907	Terrabacteria group	Firmicutes	2.83565	32.8	-	AJBR01	3	2954	2786	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00809188	GCA_000363665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/665/GCA_000363665.1_Stap_aure_M1531_V1	-	M1531
Staphylococcus aureus M1533	1158501	PRJNA88909	88909	Terrabacteria group	Firmicutes	2.83985	32.9	-	AJBS01	7	2970	2809	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809194	GCA_000363685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/685/GCA_000363685.1_Stap_aure_M1533_V1	-	M1533
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121542	1412557	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007368.2/CP007368.2	-	1	4708	4449	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384278	GCA_000624735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/735/GCA_000624735.2_ASM62473v2	24786953	EC20121542
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.58514	30.5	-	CUNM01	10	1656	1555	3/31/15	3/18/17	Contig	SC	SAMEA1010323	GCA_001232425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/425/GCA_001232425.1_7065_7_61	-	OXC6409
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	2.94864	37.9	-	JPCE01	16	3009	2909	7/15/14	2/26/17	Contig	Cornell University	SAMN02741618	GCA_000729285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/285/GCA_000729285.1_ASM72928v1	-	FSL R8-7761
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.79295	35.1	-	NIRD01	133	6225	5781	6/19/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07205611	GCA_002200185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/185/GCA_002200185.1_ASM220018v1	-	MOD1_Bc229
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.01623	32.4	-	LXRP01	54	1897	1827	6/7/16	6/7/16	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04940127	GCA_001658655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/655/GCA_001658655.1_ASM165865v1	-	LRKNS080
Mycobacterium tuberculosis TKK_05MA_0025	1448501	PRJNA235506	235506	Terrabacteria group	Actinobacteria	4.41441	65.6	-	JJWV01	82	4344	4129	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585996	GCA_000653035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/035/GCA_000653035.1_Myco_tube_TKK_05MA_0025_V1	-	TKK_05MA_0025
Escherichia coli	562	PRJEB15352	359653	Proteobacteria	Gammaproteobacteria	4.63813	50.8	chromosome I:NZ_LT615372.1/LT615372.1	-	1	4771	4457	1/2/17	2/26/17	Chromosome	UNIVERSITY OF EXETER	SAMEA4444103	GCA_900096785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/096/785/GCA_900096785.1_Ecoli_AG100_Sample2_Doxycycline_Assembly	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.99489	39.7	-	COFS02	108	2170	1974	3/23/15	3/11/17	Contig	SC	SAMEA1463007	GCA_001090825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/825/GCA_001090825.2_7622_5_90	-	ND6073
Helicobacter pylori SA301A	1345542	PRJEB4131	216079	Proteobacteria	delta/epsilon subdivisions	1.65766	39	-	CBPH01	51	1640	1438	9/21/13	3/24/17	Contig	MHH	SAMEA2271915	GCA_000476715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/715/GCA_000476715.1_SA301A	23898187	SA301A
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.0391	52.1	-	CMZP01	176	2280	2040	3/22/15	3/21/17	Scaffold	SC	SAMEA1031736	GCA_001098525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/525/GCA_001098525.1_6714_4_17	-	NM2811
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.01558	65.8	-	JTWD01	202	6788	6464	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105506	GCA_000794925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/925/GCA_000794925.1_AZPAE14729	25367914	AZPAE14729
Acinetobacter baumannii UH5707	1398974	PRJNA218775	218775	Proteobacteria	Gammaproteobacteria	4.04927	38.9	-	AYFN01	165	3934	3803	1/7/14	3/18/17	Contig	J. Craig Venter Institute	SAMN02597392	GCA_000516195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/195/GCA_000516195.2_gabuh5707_v01	24449752	UH5707
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.03173	35.2	-	LCVQ01	19	2107	1983	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435050	GCA_001016855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/855/GCA_001016855.1_ASM101685v1	25946017	ES-PW-124
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.04259	41.1	-	FIKB01	25	2047	1952	2/10/16	3/19/17	Contig	SC	SAMEA1316567	GCA_900049975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/975/GCA_900049975.1_7054_7_36	-	SS1033
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54074	38.3	-	FJJW01	62	3236	3089	2/20/16	3/27/17	Contig	SC	SAMEA2080689	GCA_900062735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/735/GCA_900062735.1_10625_2_94	-	2532STDY5467567
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.74672	50.7	-	CXKT01	388	5276	4569	7/16/15	2/24/17	Scaffold	SC	SAMEA2003443	GCA_001252375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/375/GCA_001252375.1_8290_4_51	-	109251
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.13758	68.1	-	LXAH01	208	7418	6760	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208704	GCA_001979115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/115/GCA_001979115.1_ASM197911v1	-	MSHR0800
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.02319	47.5	-	MSEZ01	108	3812	3676	3/31/17	4/6/17	Contig	Univ. of Maryland	SAMN06144949	GCA_002076695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/695/GCA_002076695.1_ASM207669v1	28219321	8Mo
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.26304	29.2	-	MPFY01	372	3887	3706	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710964	GCA_002303215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/215/GCA_002303215.1_ASM230321v1	-	7505-Y/ST2
Vibrio parahaemolyticus	670	PRJNA233509	233509	Proteobacteria	Gammaproteobacteria	5.09662	45.3	-	LFUL01	94	4903	4441	8/19/15	3/26/17	Contig	Omics Solutions	SAMN02781341	GCA_001270835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/835/GCA_001270835.1_ASM127083v1	-	PMA37.5
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.84719	57	-	LEWI01	16	5953	5669	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280271	GCA_001031595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/595/GCA_001031595.1_Kleb_pneu_CHS128_V1	-	CHS128
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.00691	37.4	-	JUXC01	223	3096	2927	7/10/15	3/26/17	Contig	University of Washington	SAMN03197890	GCA_001058875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/875/GCA_001058875.1_ASM105887v1	26230489	687_EFLS
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.1497	52.4	-	CQKU01	67	2515	2202	3/23/15	4/10/17	Scaffold	SC	SAMEA1677304	GCA_001137245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/245/GCA_001137245.1_8727_5_45	-	GCGS195
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	2.39947	38.7	-	LNOY01	164	2486	2312	2/17/16	3/27/17	Contig	Uppsala University	SAMN04270975	GCA_001562905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/905/GCA_001562905.1_ASM156290v1	-	VRE-1503268
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.7965	67.8	-	CSRT01	557	3775	3217	3/23/15	3/26/17	Scaffold	SC	SAMEA751341	GCA_001198095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/095/GCA_001198095.1_5601_3_9	-	B332
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65983	31.4	-	FBBG01	23	1721	1623	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683094	GCA_001491795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/795/GCA_001491795.1_EC5240a	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.84646	55.4	-	FKCO01	45	4765	4537	4/6/16	3/28/17	Scaffold	SC	SAMEA2273459	GCA_900076645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/645/GCA_900076645.1_12045_5_38	-	e2487
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.87458	64.2	-	FVNK01	10	4852	4725	3/10/17	3/18/17	Contig	SC	SAMEA2070706	GCA_900136635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/635/GCA_900136635.1_10625_4_84	-	84
Pseudomonas sp. 35 E 8	1844103	PRJEB9508	335877	Proteobacteria	Gammaproteobacteria	6.35724	59.8	-	CVTQ01	29	5931	5709	7/29/16	4/13/17	Scaffold	"JOHN INNES CENTRE, NORWICH, UK."	SAMEA3442628	GCA_900005945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/005/945/GCA_900005945.1_PSEFL294_LIB5408	-	-
Streptomyces sp. IB2014 011-1	1844478	PRJNA320350	320350	Terrabacteria group	Actinobacteria	8.19576	71.5	-	LZQS01	31	7405	7091	2/2/17	3/15/17	Scaffold	Helmholtz Centre for Infection Research	SAMN04932664	GCA_001983595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/595/GCA_001983595.1_ASM198359v1	-	IB2014 011-1
Streptomyces sp. MP131-18	1857892	PRJNA324630	324630	Terrabacteria group	Actinobacteria	7.95664	72	-	LZNS01	10	7055	6660	2/3/17	3/15/17	Scaffold	Helmholtz Centre for Infection Research	SAMN05211002	GCA_001984575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/575/GCA_001984575.1_ASM198457v1	-	MP131-18
Pseudomonas sp. 8 R 14	1844092	PRJEB9508	335877	Proteobacteria	Gammaproteobacteria	6.87054	60.9	-	CVTH01	93	6321	6075	7/29/16	4/13/17	Scaffold	"JOHN INNES CENTRE, NORWICH, UK."	SAMEA3442617	GCA_900005955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/005/955/GCA_900005955.1_PSEFL294_LIB5395	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.28745	64.1	-	FSJF01	25	5410	5213	12/14/16	3/21/17	Contig	SC	SAMEA2071234	GCA_900136665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/665/GCA_900136665.1_10625_5_21	-	106
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.94884	55	-	FKCU01	60	4880	4658	4/6/16	3/28/17	Scaffold	SC	SAMEA2273457	GCA_900076655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/655/GCA_900076655.1_12045_5_36	-	e2430
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65993	31.4	-	FAYZ01	23	1723	1625	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683029	GCA_001491815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/815/GCA_001491815.1_EC3607	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.80502	67.8	-	CSRG01	466	3734	3233	3/23/15	3/26/17	Scaffold	SC	SAMEA751337	GCA_001198195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/195/GCA_001198195.1_5476_7_7	-	B034
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	2.92666	38.2	-	LNOU01	174	3076	2881	2/17/16	3/27/17	Contig	Uppsala University	SAMN04270971	GCA_001562915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/915/GCA_001562915.1_ASM156291v1	-	VRE-1502856
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.08955	52.6	-	CQMG01	83	2461	2118	3/22/15	4/11/17	Scaffold	SC	SAMEA1690395	GCA_001137365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/365/GCA_001137365.1_8289_2_62	-	GCGS062
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.99763	37.2	-	JUVP01	147	3083	2929	7/10/15	3/26/17	Contig	University of Washington	SAMN03197929	GCA_001058995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/995/GCA_001058995.1_ASM105899v1	26230489	724_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.66834	57	-	LEWJ01	13	5802	5500	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280272	GCA_001031625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/625/GCA_001031625.1_Kleb_pneu_CHS129_V1	-	CHS129
Vibrio parahaemolyticus	670	PRJNA288141	288141	Proteobacteria	Gammaproteobacteria	5.06027	45.2	-	LFXK01	93	4924	4635	8/21/15	3/26/17	Contig	Health Canada	SAMN03799829	GCA_001273555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/555/GCA_001273555.1_ASM127355v1	-	RM-14-5
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.02006	29.1	-	MPJN01	1032	3873	3498	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710890	GCA_002303225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/225/GCA_002303225.1_ASM230322v1	-	6603-Y/ST2
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.04323	47.5	-	MSIZ01	106	3846	3694	4/4/17	4/5/17	Contig	Univ. of Maryland	SAMN06144972	GCA_002078695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/695/GCA_002078695.1_ASM207869v1	28219321	TEM/15/01-005
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.15628	68.2	-	LXAI01	165	7416	6795	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208705	GCA_001979135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/135/GCA_001979135.1_ASM197913v1	-	MSHR0952
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.63757	50.4	-	CWZP01	416	5209	4415	7/16/15	2/24/17	Scaffold	SC	SAMEA2445752	GCA_001252395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/395/GCA_001252395.1_12971_8_61	-	H132900517
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54026	38.3	-	FJKA01	62	3230	3089	2/20/16	3/27/17	Contig	SC	SAMEA2080696	GCA_900062745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/745/GCA_900062745.1_10625_3_29	-	2532STDY5467598
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.18499	41	-	FILF01	29	2207	2045	2/10/16	3/19/17	Contig	SC	SAMEA1316593	GCA_900049985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/985/GCA_900049985.1_7054_7_62	-	SS967
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.15884	35.3	-	LCVS01	45	2219	2053	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435052	GCA_001016875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/875/GCA_001016875.1_ASM101687v1	25946017	ES-PW-156
Acinetobacter baumannii UH6107	1398975	PRJNA218776	218776	Proteobacteria	Gammaproteobacteria	4.05731	39	-	AYFM01	172	3970	3774	1/7/14	3/18/17	Contig	J. Craig Venter Institute	SAMN02597391	GCA_000516215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/215/GCA_000516215.2_gabuh6107_v01	24449752	UH6107
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.86576	66	-	JTWC01	198	6643	6320	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105507	GCA_000794945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/945/GCA_000794945.1_AZPAE14730	25367914	AZPAE14730
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05511	52.1	-	CMZW01	179	2301	2052	3/22/15	3/17/17	Scaffold	SC	SAMEA1031673	GCA_001099965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/965/GCA_001099965.1_6714_4_3	-	NM2433
Helicobacter pylori SA171C	1345580	PRJEB4091	216083	Proteobacteria	delta/epsilon subdivisions	1.61134	38.8	-	CBPC01	37	1580	1434	9/21/13	3/24/17	Contig	MHH	SAMEA2272468	GCA_000476735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/735/GCA_000476735.1_SA171C	23898187	SA171C
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.05894	39.7	-	CKPM01	53	2270	2046	3/21/15	3/11/17	Contig	SC	SAMEA1024661	GCA_001090845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/845/GCA_001090845.1_6680_5_22	-	SMRU934
Escherichia coli	562	PRJEB15352	359653	Proteobacteria	Gammaproteobacteria	4.63813	50.8	chromosome I:NZ_LT615375.1/LT615375.1	-	1	4773	4454	1/2/17	2/26/17	Chromosome	UNIVERSITY OF EXETER	SAMEA4444108	GCA_900096805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/096/805/GCA_900096805.1_Ecoli_AG100_Sample1_Wildtype_Assembly	-	-
Mycobacterium tuberculosis TKK_05MA_0026	1448502	PRJNA235507	235507	Terrabacteria group	Actinobacteria	4.40291	65.6	-	JJWU01	1	4281	4117	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585997	GCA_000653055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/055/GCA_000653055.1_Myco_tube_TKK_05MA_0026_V1	-	TKK_05MA_0026
Staphylococcus epidermidis	1282	PRJNA314440	314440	Terrabacteria group	Firmicutes	2.02431	31.7	-	LXRU01	81	2037	1932	6/7/16	6/7/16	Contig	Universitaetsklinikum Schleswig Holstein Luebeck	SAMN04942503	GCA_001658835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/835/GCA_001658835.1_ASM165883v1	-	LRKNS083
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.76894	34.9	-	NINJ01	81	6094	5711	6/20/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163287	GCA_002201555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/555/GCA_002201555.1_ASM220155v1	-	MOD1_Bc218
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09321	37.9	-	JPCF01	27	3131	3042	7/15/14	2/26/17	Contig	Cornell University	SAMN02741619	GCA_000729305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/305/GCA_000729305.1_ASM72930v1	-	FSL R8-7786
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.78131	30.2	-	CUNL01	22	1891	1749	3/31/15	3/18/17	Contig	SC	SAMEA1010380	GCA_001232465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/465/GCA_001232465.1_7065_7_6	-	OXC6352
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121671	1412565	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68583	52.2	chromosome:NZ_CP007369.2/CP007369.2	-	1	4707	4448	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384286	GCA_000624755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/755/GCA_000624755.2_ASM62475v2	24786953	EC20121671
Staphylococcus aureus M1544	1158502	PRJNA88911	88911	Terrabacteria group	Firmicutes	2.91789	32.9	-	AJBT01	11	3070	2895	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809195	GCA_000363705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/705/GCA_000363705.1_Stap_aure_M1544_V1	-	M1544
Staphylococcus aureus M1556	1158503	PRJNA88913	88913	Terrabacteria group	Firmicutes	2.89527	32.9	-	AJBU01	7	3026	2859	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809196	GCA_000363725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/725/GCA_000363725.1_Stap_aure_M1556_V1	-	M1556
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121672	1412561	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68583	52.2	chromosome:NZ_CP007370.2/CP007370.2	-	1	4711	4448	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384282	GCA_000624775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/775/GCA_000624775.2_ASM62477v2	24786953	EC20121672
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66482	30.3	-	CULC01	13	1769	1641	3/31/15	3/18/17	Contig	SC	SAMEA1010422	GCA_001232485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/485/GCA_001232485.1_7038_3_92	-	OXC6342
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09755	37.7	-	JPCN01	33	3206	3100	7/15/14	2/26/17	Contig	Cornell University	SAMN02741627	GCA_000729325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/325/GCA_000729325.1_ASM72932v1	-	FSL R8-7846
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.13114	35.4	-	NINF01	86	5541	5215	6/20/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163269	GCA_002201605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/605/GCA_002201605.1_ASM220160v1	-	MOD1_Bc194
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	4.79355	31.6	-	JWCX01	254	-	-	7/10/15	7/13/16	Scaffold	University of Washington	SAMN03197063	GCA_001070175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/175/GCA_001070175.1_ASM107017v1	26230489	110_SEPI
Mycobacterium tuberculosis TKK_05MA_0031	1448504	PRJNA235509	235509	Terrabacteria group	Actinobacteria	4.38936	65.6	-	JJWT01	79	4322	4110	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02585999	GCA_000653075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/075/GCA_000653075.1_Myco_tube_TKK_05MA_0031_V1	-	TKK_05MA_0031
Escherichia coli	562	PRJEB15352	359653	Proteobacteria	Gammaproteobacteria	4.63813	50.8	chromosome I:NZ_LT615373.1/LT615373.1	-	1	4773	4453	1/2/17	2/26/17	Chromosome	UNIVERSITY OF EXETER	SAMEA4444106	GCA_900096815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/096/815/GCA_900096815.1_Ecoli_AG100_Sample2_M9_Assembly	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.01062	39.6	-	CNNY02	119	2175	1983	3/23/15	3/11/17	Contig	SC	SAMEA1032460	GCA_001090865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/865/GCA_001090865.2_6925_1_70	-	R34-3052
Helicobacter pylori SA300C	1345541	PRJEB4130	216007	Proteobacteria	delta/epsilon subdivisions	1.61735	39.1	-	CBPL01	36	1584	1430	9/21/13	3/24/17	Contig	MHH	SAMEA2272093	GCA_000476755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/755/GCA_000476755.1_SA300C	23898187	SA300C
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05312	52.1	-	CMYG01	176	2319	2067	3/23/15	3/17/17	Scaffold	SC	SAMEA1031641	GCA_001100325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/325/GCA_001100325.1_6714_2_23	-	NM2009
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.23197	66.5	-	JTWB01	105	5949	5731	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105508	GCA_000794965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/965/GCA_000794965.1_AZPAE14731	25367914	AZPAE14731
Acinetobacter baumannii UH6207	1398976	PRJNA218777	218777	Proteobacteria	Gammaproteobacteria	3.86515	38.9	-	AYFL01	100	3722	3600	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597390	GCA_000516235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/235/GCA_000516235.1_gabuh6207_v01	24449752	UH6207
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.18074	35.4	-	LCVT01	40	2302	2122	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435053	GCA_001016895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/895/GCA_001016895.1_ASM101689v1	25946017	ES-PW-160
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05655	41.1	-	FIMI01	23	2083	1950	2/10/16	3/19/17	Contig	SC	SAMEA1566209	GCA_900049995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/995/GCA_900049995.1_8337_6_5	-	BM198a
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54056	38.3	-	FJKB01	64	3237	3082	2/20/16	3/27/17	Contig	SC	SAMEA2077792	GCA_900062755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/755/GCA_900062755.1_10625_3_16	-	2532STDY5467585
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.58429	50.5	-	CWZA01	410	5075	4325	7/16/15	2/24/17	Scaffold	SC	SAMEA2445735	GCA_001252415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/415/GCA_001252415.1_12971_8_47	-	H112960373
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.16085	68.2	-	LXAJ01	175	7433	6828	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208706	GCA_001979165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/165/GCA_001979165.1_ASM197916v1	-	MSHR2053
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.04373	47.5	-	MSIU01	92	3844	3696	4/4/17	4/5/17	Contig	Univ. of Maryland	SAMN06144967	GCA_002078705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/705/GCA_002078705.1_ASM207870v1	28219321	21027
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.09694	28.6	-	MOTA01	141	3727	3586	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710895	GCA_002303245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/245/GCA_002303245.1_ASM230324v1	-	6612-DH/ST28
Vibrio parahaemolyticus	670	PRJNA288141	288141	Proteobacteria	Gammaproteobacteria	5.07432	45.3	-	LFYN01	153	4873	4567	8/21/15	3/26/17	Contig	Health Canada	SAMN03799839	GCA_001273635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/635/GCA_001273635.1_ASM127363v1	-	S357-21
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.87205	57	-	LEWK01	13	5949	5675	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280274	GCA_001031635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/635/GCA_001031635.1_Kleb_pneu_CHS131_V1	-	CHS131
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.98645	37.2	-	JUVA01	261	3080	2904	7/10/15	3/26/17	Contig	University of Washington	SAMN03197944	GCA_001059045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/045/GCA_001059045.1_ASM105904v1	26230489	739_EFLS
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.14385	52.4	-	CQIF01	73	2507	2190	3/23/15	4/11/17	Scaffold	SC	SAMEA1677436	GCA_001138225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/225/GCA_001138225.1_8727_5_81	-	GCGS231
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	2.97933	38	-	LNOX01	143	3145	2937	2/17/16	3/27/17	Contig	Uppsala University	SAMN04270974	GCA_001562925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/925/GCA_001562925.1_ASM156292v1	-	VRE-1503262
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.82949	67.9	-	CSSR01	320	3689	3297	3/23/15	3/26/17	Scaffold	SC	SAMEA751475	GCA_001198375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/375/GCA_001198375.1_5476_5_6	-	B039
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.63811	31.4	-	FBKI01	16	1686	1605	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683335	GCA_001491835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/835/GCA_001491835.1_H123080386	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.82426	55.1	-	FKCS01	42	4709	4459	4/6/16	3/28/17	Scaffold	SC	SAMEA2273461	GCA_900076665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/665/GCA_900076665.1_12045_5_40	-	e2549
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.07884	64.1	-	FVNO01	20	5131	4979	3/10/17	3/18/17	Contig	SC	SAMEA2070714	GCA_900136685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/685/GCA_900136685.1_10625_5_23	-	108
Pseudomonas sp. 58 R 3	1844108	PRJEB9508	335877	Proteobacteria	Gammaproteobacteria	6.66413	60.1	-	CVTT01	88	6083	5834	7/29/16	4/13/17	Scaffold	"JOHN INNES CENTRE, NORWICH, UK."	SAMEA3442633	GCA_900006605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/006/605/GCA_900006605.1_PSEFL294_LIB5413	-	-
Streptomyces sp. CB03238	1907777	PRJNA347575	347575	Terrabacteria group	Actinobacteria	8.51843	71.5	-	NBCN01	56	7769	7338	4/18/17	4/21/17	Scaffold	The Scripps Research Institute	SAMN06642752	GCA_002099185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/185/GCA_002099185.1_ASM209918v1	28256838	CB03238
Streptomyces sp. 13-12-16	1570823	PRJNA382613	382613	Terrabacteria group	Actinobacteria	8.71789	71.6	-	NCTE01	1513	8434	6817	4/28/17	5/3/17	Scaffold	SJTU	SAMN06711119	GCA_002114215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/215/GCA_002114215.1_ASM211421v1	-	13-12-16
Pseudomonas sp. 1 R 17	1844091	PRJEB9508	335877	Proteobacteria	Gammaproteobacteria	7.01933	60.6	-	FKLB01	70	6466	6246	7/29/16	4/13/17	Scaffold	"JOHN INNES CENTRE, NORWICH, UK."	SAMEA3442616	GCA_900067035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/067/035/GCA_900067035.1_PSEFL294_LIB5394	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.08948	64.1	-	FSJH01	17	5095	4993	12/14/16	4/2/17	Contig	SC	SAMEA2070303	GCA_900136695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/695/GCA_900136695.1_10625_5_25	-	110
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.83214	55.1	-	FKDE01	62	4746	4511	4/6/16	3/28/17	Scaffold	SC	SAMEA2273135	GCA_900076675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/675/GCA_900076675.1_12045_4_15	-	e261
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.7012	31.3	-	FBKW01	30	1777	1681	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683349	GCA_001491855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/855/GCA_001491855.1_H065100499	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.80814	67.8	-	CSNS01	536	3769	3234	3/22/15	3/26/17	Scaffold	SC	SAMEA751506	GCA_001198715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/715/GCA_001198715.1_5476_7_10	-	B044
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	2.51418	38.4	-	LNOT01	132	2576	2417	2/17/16	3/27/17	Contig	Uppsala University	SAMN04270970	GCA_001562975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/975/GCA_001562975.1_ASM156297v1	-	VRE-1502382
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.09741	52.6	-	CQNJ01	86	2467	2133	3/22/15	4/11/17	Scaffold	SC	SAMEA1690402	GCA_001143005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/005/GCA_001143005.1_8727_8_80	-	GCGS176
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.19095	37.1	-	JUPR01	307	3333	3137	7/10/15	3/26/17	Contig	University of Washington	SAMN03198083	GCA_001059265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/265/GCA_001059265.1_ASM105926v1	26230489	876_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.73579	56.9	-	LEWL01	5	5843	5534	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280275	GCA_001031645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/645/GCA_001031645.1_Kleb_pneu_CHS132_V1	-	CHS132
Vibrio parahaemolyticus	670	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.33229	45.2	-	LOSG01	3	5171	4783	12/21/15	3/19/17	Contig	US Food and Drug Administration 	SAMN03996335	GCA_001471485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/485/GCA_001471485.1_ASM147148v1	-	NSV 5736
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.17732	28.6	-	MPJP01	101	3852	3715	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710897	GCA_002303265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/265/GCA_002303265.1_ASM230326v1	-	6614-AL/ST34
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.03911	47.5	-	MSJB01	96	3830	3696	4/4/17	4/5/17	Contig	Univ. of Maryland	SAMN06144974	GCA_002078715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/715/GCA_002078715.1_ASM207871v1	28219321	19886
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.05383	68.1	-	LXAL01	154	7313	6728	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208708	GCA_001979175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/175/GCA_001979175.1_ASM197917v1	-	MSHR1048
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.75535	50.7	-	CWTW01	391	5432	4591	7/16/15	2/24/17	Scaffold	SC	SAMEA3345036	GCA_001252435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/435/GCA_001252435.1_H14128036201	-	36201ss_1
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.57194	38.2	-	FJEA01	36	3281	3127	2/20/16	3/27/17	Contig	SC	SAMEA2064373	GCA_900062855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/855/GCA_900062855.1_10771_3_37	-	2531STDY5467414
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.09283	41.1	-	FIMT01	23	2125	2003	2/10/16	3/19/17	Contig	SC	SAMEA1566046	GCA_900050005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/005/GCA_900050005.1_8337_6_15	-	BM241a
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.04285	35.3	-	LCVW01	81	2139	1965	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435056	GCA_001016915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/915/GCA_001016915.1_ASM101691v1	25946017	ES-PW-195
Acinetobacter baumannii UH6507	1398977	PRJNA218778	218778	Proteobacteria	Gammaproteobacteria	3.76227	38.8	-	AYFK01	47	3582	3451	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597389	GCA_000516255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/255/GCA_000516255.1_gabuh6507_v01	24449752	UH6507
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.79356	66.1	-	JTWA01	196	6549	6291	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105509	GCA_000794985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/985/GCA_000794985.1_AZPAE14732	25367914	AZPAE14732
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.0829	52	-	CMYU01	137	2358	2056	3/23/15	3/21/17	Scaffold	SC	SAMEA1031636	GCA_001100565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/565/GCA_001100565.1_6714_3_12	-	NM2244
Helicobacter pylori SA172C	1345582	PRJEB4093	216049	Proteobacteria	delta/epsilon subdivisions	1.65807	38.4	-	CBPG01	51	1599	1454	9/21/13	3/24/17	Contig	MHH	SAMEA2272038	GCA_000476815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/815/GCA_000476815.1_SA172C	23898187	SA172C
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.05506	39.8	-	CLGW01	50	2256	2048	3/21/15	3/11/17	Contig	SC	SAMEA1025748	GCA_001091045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/045/GCA_001091045.1_6925_4_2	-	SMRU2138
Escherichia coli	562	PRJEB15352	359653	Proteobacteria	Gammaproteobacteria	4.63813	50.8	chromosome I:NZ_LT615374.1/LT615374.1	-	1	4720	4406	1/2/17	2/26/17	Chromosome	UNIVERSITY OF EXETER	SAMEA4444105	GCA_900096825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/096/825/GCA_900096825.1_Ecoli_AG100_Sample1_M9_Assembly	-	-
Mycobacterium tuberculosis TKK_05MA_0033	1448505	PRJNA235510	235510	Terrabacteria group	Actinobacteria	4.40331	65.6	-	JJWS01	78	4321	4132	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586000	GCA_000653095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/095/GCA_000653095.1_Myco_tube_TKK_05MA_0033_V1	-	TKK_05MA_0033
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	7.72405	49.9	-	JVUF01	1909	-	-	7/10/15	7/13/16	Scaffold	University of Washington	SAMN03197289	GCA_001070555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/555/GCA_001070555.1_ASM107055v1	26230489	1312_SEPI
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.19799	35.4	-	NINH01	70	5619	5290	6/20/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163266	GCA_002201645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/645/GCA_002201645.1_ASM220164v1	-	MOD1_Bc197
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.08098	37.9	-	JPCK01	143	3192	3066	7/15/14	2/26/17	Contig	Cornell University	SAMN02741624	GCA_000729345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/345/GCA_000729345.1_ASM72934v1	-	FSL R8-7829
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.7333	30.4	-	CUQN01	18	1831	1698	3/31/15	3/18/17	Contig	SC	SAMEA1010298	GCA_001232545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/545/GCA_001232545.1_7092_1_47	-	OXC6494
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121689	1412616	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68579	52.2	chromosome:NZ_CP007371.2/CP007371.2	-	1	4705	4449	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384337	GCA_000624795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/795/GCA_000624795.2_ASM62479v2	24786953	EC20121689
Staphylococcus aureus M1563	1158504	PRJNA88915	88915	Terrabacteria group	Firmicutes	2.86398	32.9	-	AJBV01	7	2980	2804	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809197	GCA_000363745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/745/GCA_000363745.1_Stap_aure_M1563_V1	-	M1563
Staphylococcus aureus M1565	1158505	PRJNA88917	88917	Terrabacteria group	Firmicutes	2.87273	33	-	AJBW01	5	2992	2824	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809198	GCA_000363765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/765/GCA_000363765.1_Stap_aure_M1565_V1	-	M1565
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20121703	1412483	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007372.2/CP007372.2	-	1	4708	4445	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384204	GCA_000624815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/815/GCA_000624815.2_ASM62481v2	24786953	SA20121703
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64159	30.3	-	CUNF01	8	1718	1603	3/31/15	3/18/17	Contig	SC	SAMEA1010297	GCA_001232585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/585/GCA_001232585.1_7065_7_54	-	OXC6402
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.12673	37.9	-	JPCP01	22	3189	3086	7/15/14	2/26/17	Contig	Cornell University	SAMN02741629	GCA_000729355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/355/GCA_000729355.1_ASM72935v1	-	FSL R8-7866
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.31098	35.1	-	NINK01	43	5670	5360	6/20/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163332	GCA_002201665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/665/GCA_002201665.1_ASM220166v1	-	MOD1_Bc219
Staphylococcus epidermidis	1282	PRJNA267549	267549	Terrabacteria group	Firmicutes	6.00094	36.2	-	JVAP01	597	-	-	7/10/15	7/13/16	Scaffold	University of Washington	SAMN03197799	GCA_001073525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/525/GCA_001073525.1_ASM107352v1	26230489	6_SEPI
Mycobacterium tuberculosis TKK_05MA_0035	1448506	PRJNA235511	235511	Terrabacteria group	Actinobacteria	4.40404	65.6	-	JJWR01	76	4322	4129	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586001	GCA_000653115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/115/GCA_000653115.1_Myco_tube_TKK_05MA_0035_V1	-	TKK_05MA_0035
Escherichia coli	562	PRJEB15352	359653	Proteobacteria	Gammaproteobacteria	4.63813	50.8	chromosome I:NZ_LT615376.1/LT615376.1	-	1	4773	4454	1/2/17	2/26/17	Chromosome	UNIVERSITY OF EXETER	SAMEA4444110	GCA_900096835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/096/835/GCA_900096835.1_Ecoli_AG100_Sample3_Wildtype_Assembly	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.10849	39.7	-	CNOG02	176	2329	2105	3/23/15	3/5/17	Contig	SC	SAMEA1032744	GCA_001091085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/085/GCA_001091085.2_6925_2_78	-	R34-3059
Helicobacter pylori SA40C	1345527	PRJEB4052	216075	Proteobacteria	delta/epsilon subdivisions	1.52841	39	-	CBPN01	188	1512	1302	9/21/13	3/24/17	Contig	MHH	SAMEA2272733	GCA_000476835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/835/GCA_000476835.1_SA40C	23898187	SA40C
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.24126	52	-	CMYE01	154	2540	2218	3/23/15	3/21/17	Scaffold	SC	SAMEA1031699	GCA_001106985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/985/GCA_001106985.1_6714_2_4	-	NM1829
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.21027	66.5	-	JTVZ01	67	5881	5717	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105510	GCA_000794995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/995/GCA_000794995.1_AZPAE14809	25367914	AZPAE14809
Acinetobacter baumannii UH6907	1398978	PRJNA218779	218779	Proteobacteria	Gammaproteobacteria	4.01303	38.9	-	AYFJ01	146	3838	3660	1/7/14	3/16/17	Contig	J. Craig Venter Institute	SAMN02597388	GCA_000516275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/275/GCA_000516275.1_gabuh6907_v01	24449752	UH6907
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.05794	35.4	-	LCVU01	15	2121	2012	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435054	GCA_001016935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/935/GCA_001016935.1_ASM101693v1	25946017	ES-PW-174
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.09121	41.2	-	FIMU01	20	2128	2003	2/10/16	3/19/17	Contig	SC	SAMEA1566063	GCA_900050015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/015/GCA_900050015.1_8337_6_14	-	BM237a
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.44354	38.3	-	FJGF01	20	3152	3051	2/20/16	3/27/17	Contig	SC	SAMEA2077742	GCA_900062865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/865/GCA_900062865.1_10625_2_60	-	2532STDY5467533
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.91116	50.5	-	CWZK01	439	5519	4719	7/16/15	2/24/17	Scaffold	SC	SAMEA2445745	GCA_001252455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/455/GCA_001252455.1_12971_8_54	-	H140820643
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.76111	67.5	-	LXAK01	307	8050	7347	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208707	GCA_001979195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/195/GCA_001979195.1_ASM197919v1	-	MSHR0663
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.04423	47.5	-	MSJA01	96	3834	3695	4/4/17	4/5/17	Contig	Univ. of Maryland	SAMN06144973	GCA_002078795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/795/GCA_002078795.1_ASM207879v1	28219321	J8YRS KAGUNGA
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	3.9586	28.5	-	MPJO01	132	3630	3448	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710891	GCA_002303305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/305/GCA_002303305.1_ASM230330v1	-	6606-BK/ST11
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.19595	45.2	-	LNTR01	93	5060	4790	2/11/16	3/19/17	Contig	Health Canada	SAMN04293498	GCA_001559885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/885/GCA_001559885.1_ASM155988v1	-	Sep-61
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.88328	56.9	-	LEWM01	6	5944	5663	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280276	GCA_001031675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/675/GCA_001031675.1_Kleb_pneu_CHS133_V1	-	CHS133
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.86108	37.4	-	JUOO01	187	2945	2815	7/10/15	3/26/17	Contig	University of Washington	SAMN03198112	GCA_001059345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/345/GCA_001059345.1_ASM105934v1	26230489	905_EFLS
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.13052	52.6	-	CQOK01	74	2494	2186	3/22/15	4/11/17	Scaffold	SC	SAMEA1677318	GCA_001144005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/005/GCA_001144005.1_8727_5_62	-	GCGS212
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	2.39178	38.5	-	LNOZ01	164	2481	2326	2/17/16	3/27/17	Contig	Uppsala University	SAMN04270976	GCA_001562995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/995/GCA_001562995.1_ASM156299v1	-	VRE-1503642
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.81401	67.9	-	CSSO01	354	3688	3304	3/23/15	3/26/17	Scaffold	SC	SAMEA751152	GCA_001198815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/815/GCA_001198815.1_5601_2_6	-	B087
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.69098	31.2	-	FAYL01	35	1778	1633	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683010	GCA_001491875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/875/GCA_001491875.1_UNF491c	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.82763	55.1	-	FKDL01	43	4718	4479	4/6/16	3/28/17	Scaffold	SC	SAMEA2273462	GCA_900076685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/685/GCA_900076685.1_12045_5_41	-	e2550
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.12937	64.1	-	FVNP01	13	5209	5049	3/10/17	3/18/17	Contig	SC	SAMEA2070304	GCA_900136715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/715/GCA_900136715.1_10625_5_28	-	113
Pseudomonas sp. NFACC56-3	1566217	PRJEB15968	348301	Proteobacteria	Gammaproteobacteria	6.32492	61.2	-	FMTK01	46	5742	5535	10/14/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159481	GCA_900100025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/025/GCA_900100025.1_IMG-taxon_2599185325_annotated_assembly	-	NFACC56-3
Streptomyces sp. NRRL B-24085	1709476	PRJNA293375	293375	Terrabacteria group	Actinobacteria	8.83068	71.3	-	MWIF01	692	8224	7509	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06361599	GCA_002156095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/095/GCA_002156095.1_ASM215609v1	-	NRRL B-24085
Streptomyces sp. NRRL B-24572	1962156	PRJNA293375	293375	Terrabacteria group	Actinobacteria	8.37715	71.9	-	MWIG01	1243	8002	6850	5/22/17	5/24/17	Scaffold	USDA/ARS/NCAUR	SAMN06364930	GCA_002156145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/145/GCA_002156145.1_ASM215614v1	-	NRRL B-24572
Pseudomonas sp. NFACC05-1	1566241	PRJEB15976	348284	Proteobacteria	Gammaproteobacteria	6.65819	60.7	-	FMTR01	58	6084	5881	10/14/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159424	GCA_900100135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/135/GCA_900100135.1_IMG-taxon_2599185313_annotated_assembly	-	NFACC05-1
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.12772	64.2	-	FVNN01	13	5208	5046	3/10/17	3/18/17	Contig	SC	SAMEA2071236	GCA_900136725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/725/GCA_900136725.1_10625_5_27	-	112
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.70252	55.2	-	FKCW01	60	4634	4396	4/6/16	3/28/17	Scaffold	SC	SAMEA2273463	GCA_900076695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/695/GCA_900076695.1_12045_5_42	-	e2575
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75022	31.2	-	FBDR01	23	1841	1744	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683155	GCA_001491895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/895/GCA_001491895.1_EC4102	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.69169	67.6	-	CSNP01	1165	3757	2940	3/23/15	3/26/17	Scaffold	SC	SAMEA751421	GCA_001198955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/955/GCA_001198955.1_5476_5_2	-	B036
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	2.54438	38.3	-	LNPB01	106	2618	2432	2/17/16	3/27/17	Contig	Uppsala University	SAMN04270978	GCA_001563005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/005/GCA_001563005.1_ASM156300v1	-	VRE-1504220
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.146	52.4	-	CQNB01	77	2511	2189	3/23/15	4/11/17	Scaffold	SC	SAMEA1690496	GCA_001145045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/045/GCA_001145045.1_8289_2_77	-	GCGS077
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.04471	37.3	-	JUMK01	141	3083	2966	7/10/15	3/26/17	Contig	University of Washington	SAMN03198168	GCA_001059635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/635/GCA_001059635.1_ASM105963v1	26230489	948_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.84656	57	-	LEWN01	3	5931	5660	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280277	GCA_001031705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/705/GCA_001031705.1_Kleb_pneu_CHS134_V1	-	CHS134
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.09442	45.3	-	LNTX01	31	4926	4691	2/11/16	4/2/17	Contig	Health Canada	SAMN04296855	GCA_001559895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/895/GCA_001559895.1_ASM155989v1	-	A1EZ919
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.04841	28.4	-	MOSX01	78	3670	3545	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710892	GCA_002303325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/325/GCA_002303325.1_ASM230332v1	-	6607-DH/ST42
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.14868	47.5	-	MWFN01	194	4010	3739	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263906	GCA_002097735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/735/GCA_002097735.1_ASM209773v1	28219321	CISM_300055
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.04605	68.1	-	LXAM01	134	7343	6760	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208709	GCA_001979215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/215/GCA_001979215.1_ASM197921v1	-	MSHR1218
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.79132	50.7	-	CXKZ01	407	5417	4630	7/17/15	2/24/17	Scaffold	SC	SAMEA2003904	GCA_001252475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/475/GCA_001252475.1_8290_4_7	-	94818
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.45267	38.3	-	FJMC01	37	3152	3016	2/20/16	3/27/17	Contig	SC	SAMEA2077994	GCA_900062875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/875/GCA_900062875.1_10625_3_93	-	2532STDY5467662
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.10802	41.2	-	FIMY01	21	2152	2043	2/10/16	3/19/17	Contig	SC	SAMEA1566113	GCA_900050025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/025/GCA_900050025.1_8337_6_20	-	BM272C
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.02881	35.3	-	LCVV01	44	2089	1930	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435055	GCA_001016955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/955/GCA_001016955.1_ASM101695v1	25946017	ES-PW-181
Acinetobacter baumannii UH7007	1398979	PRJNA218780	218780	Proteobacteria	Gammaproteobacteria	3.90733	38.8949	plasmid pABUH6b-10:NZ_AYFI01000019.1/AYFI01000019.1	AYFI01	127	3787	3648	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597387	GCA_000516295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/295/GCA_000516295.1_gabuh7007_v01	24449752	UH7007
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.31652	66.4	-	JTVY01	83	5986	5824	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105511	GCA_000795025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/025/GCA_000795025.1_AZPAE14810	25367914	AZPAE14810
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.0428	52.1	-	CMZN01	191	2282	2035	3/22/15	3/17/17	Scaffold	SC	SAMEA1031700	GCA_001108545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/545/GCA_001108545.1_6714_4_18	-	NM2812
Helicobacter pylori SA221C	1345509	PRJEB4113	215908	Proteobacteria	delta/epsilon subdivisions	1.62568	38.9	-	CBPT01	42	1592	1446	9/21/13	3/24/17	Contig	MHH	SAMEA2272484	GCA_000476855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/855/GCA_000476855.1_SA221C	23898187	SA221C
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.21351	39.4	-	CMRY01	106	2446	2188	3/22/15	3/11/17	Contig	SC	SAMEA2062387	GCA_001091125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/125/GCA_001091125.1_9803_8_62	-	6B
Escherichia coli	562	PRJEB15352	359653	Proteobacteria	Gammaproteobacteria	4.63813	50.8	chromosome I:NZ_LT615379.1/LT615379.1	-	1	4773	4454	1/2/17	2/26/17	Chromosome	UNIVERSITY OF EXETER	SAMEA4444109	GCA_900096855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/096/855/GCA_900096855.1_Ecoli_AG100_Sample2_Wildtype_Assembly	-	-
Mycobacterium tuberculosis TKK_05MA_0036	1448507	PRJNA235512	235512	Terrabacteria group	Actinobacteria	4.40452	65.6	-	JJWQ01	68	4316	4134	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586002	GCA_000653135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/135/GCA_000653135.1_Myco_tube_TKK_05MA_0036_V1	-	TKK_05MA_0036
Staphylococcus epidermidis	1282	PRJNA327106	327106	Terrabacteria group	Firmicutes	2.40259	31.9	-	MKYC01	34	-	-	12/22/16	12/22/16	Scaffold	None	SAMN05509311	GCA_001914135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/135/GCA_001914135.1_ASM191413v1	-	-
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.19948	35.3	-	NING01	49	5624	5304	6/20/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163267	GCA_002201685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/685/GCA_002201685.1_ASM220168v1	-	MOD1_Bc196
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.12679	37.9	-	JPCO01	20	3191	3086	7/15/14	2/26/17	Contig	Cornell University	SAMN02741628	GCA_000729385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/385/GCA_000729385.1_ASM72938v1	-	FSL R8-7860
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.60599	30.4	-	CULR01	22	1672	1579	3/31/15	3/18/17	Contig	SC	SAMEA1010286	GCA_001232705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/705/GCA_001232705.1_7065_7_19	-	OXC6365
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121744	1412554	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007373.2/CP007373.2	-	1	4707	4444	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384275	GCA_000624835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/835/GCA_000624835.2_ASM62483v2	24786953	EC20121744
Staphylococcus aureus M1578	1158506	PRJNA88919	88919	Terrabacteria group	Firmicutes	2.91782	32.9	-	AJBX01	5	3050	2887	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00809156	GCA_000363785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/785/GCA_000363785.1_Stap_aure_M1578_V1	-	M1578
Staphylococcus aureus B147830	1157039	PRJNA88635	88635	Terrabacteria group	Firmicutes	2.89442	32.8	-	AIWZ01	9	3024	2878	4/9/13	3/3/17	Scaffold	Broad Institute	SAMN00792166	GCA_000363805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/805/GCA_000363805.1_Stap_aure_B147830_V1	-	B147830
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121746	1412563	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007374.2/CP007374.2	-	1	4708	4447	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384284	GCA_000624855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/855/GCA_000624855.2_ASM62485v2	24786953	EC20121746
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.63178	30.4	-	CUMA01	16	1702	1611	3/31/15	3/18/17	Contig	SC	SAMEA1010558	GCA_001232725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/725/GCA_001232725.1_7065_7_27	-	OXC6373
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	2.88837	37.9	-	JPDC01	14	2917	2816	7/15/14	2/26/17	Contig	Cornell University	SAMN02741633	GCA_000729405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/405/GCA_000729405.1_ASM72940v1	-	FSL R8-7914
Bacillus cereus	1396	PRJNA326742	326742	Terrabacteria group	Firmicutes	5.56515	35	-	NINI01	59	5888	5524	6/20/17	6/22/17	Scaffold	"OARSA, CFSAN"	SAMN07163288	GCA_002201705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/705/GCA_002201705.1_ASM220170v1	-	MOD1_Bc217
Staphylococcus epidermidis	1282	PRJNA327106	327106	Terrabacteria group	Firmicutes	2.42621	31.9	-	MKYD01	77	-	-	12/22/16	12/22/16	Scaffold	None	SAMN05509323	GCA_001914145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/145/GCA_001914145.1_ASM191414v1	-	-
Mycobacterium tuberculosis TKK_05MA_0037	1448508	PRJNA235513	235513	Terrabacteria group	Actinobacteria	4.35647	65.6	-	JJWP01	65	4280	4089	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586003	GCA_000653155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/155/GCA_000653155.1_Myco_tube_TKK_05MA_0037_V1	-	TKK_05MA_0037
Escherichia coli	562	PRJEB15352	359653	Proteobacteria	Gammaproteobacteria	4.63813	50.8	chromosome I:NZ_LT615371.1/LT615371.1	-	1	4771	4456	1/2/17	2/26/17	Chromosome	UNIVERSITY OF EXETER	SAMEA4444102	GCA_900096865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/096/865/GCA_900096865.1_Ecoli_AG100_Sample1_Doxycycline_Assembly	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06033	39.6	-	COCV02	132	2229	2024	3/23/15	3/11/17	Contig	SC	SAMEA1463047	GCA_001091145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/145/GCA_001091145.2_7622_3_87	-	GL3032
Helicobacter pylori SA30C	1345507	PRJEB4042	215906	Proteobacteria	delta/epsilon subdivisions	1.66492	38.9	-	CBQB01	94	1642	1438	9/21/13	3/24/17	Contig	MHH	SAMEA2272105	GCA_000476875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/875/GCA_000476875.1_SA30C	23898187	SA30C
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.14781	52	-	CMXA01	206	2456	2120	3/22/15	3/21/17	Scaffold	SC	SAMEA1031642	GCA_001110205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/205/GCA_001110205.1_6714_1_10	-	NM1471
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.98197	66	-	JTVX01	124	6668	6441	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105512	GCA_000795045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/045/GCA_000795045.1_AZPAE14811	25367914	AZPAE14811
Acinetobacter baumannii UH7607	1398980	PRJNA218781	218781	Proteobacteria	Gammaproteobacteria	3.91253	38.9876	plasmid pABUH2b-5.4:NZ_AYFH01000057.1/AYFH01000057.1; plasmid pABUH3a-8.2:NZ_AYFH01000048.1/AYFH01000048.1	AYFH01	151	3759	3590	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597386	GCA_000516315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/315/GCA_000516315.1_gabuh7607_v01	24449752	UH7607
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.0971	35.4	-	LCWB01	36	2202	2058	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435061	GCA_001016965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/965/GCA_001016965.1_ASM101696v1	25946017	GB-PW-049
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.0666	41.1	-	FINQ01	22	2083	1963	2/10/16	3/19/17	Contig	SC	SAMEA1566079	GCA_900050035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/035/GCA_900050035.1_8337_6_39	-	BM441a
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.43862	38.2	-	FJAK01	26	3134	2969	2/20/16	3/27/17	Contig	SC	SAMEA2059987	GCA_900063035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/035/GCA_900063035.1_10771_1_47	-	2531STDY5467328
Shigella sonnei	624	PRJEB2460	204320	Proteobacteria	Gammaproteobacteria	4.45299	50.8	-	CXFO01	367	4805	4238	7/17/15	2/24/17	Scaffold	SC	SAMEA1027654	GCA_001252515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/515/GCA_001252515.1_6350_1_18	-	F3189_PFGE 3
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.96554	68	-	LXAP01	120	7264	6692	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208712	GCA_001979245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/245/GCA_001979245.1_ASM197924v1	-	MSHR1418
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	3.93714	47.7	-	MWFM01	249	3685	3485	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263907	GCA_002097745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/745/GCA_002097745.1_ASM209774v1	28219321	CISM_300205
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.09164	28.6	-	MOSY01	72	3724	3597	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710893	GCA_002303345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/345/GCA_002303345.1_ASM230334v1	-	6609-DH/ST42
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.1463	45.2	-	LODO01	34	4927	4699	3/9/16	3/19/17	Contig	Health Canada	SAMN04320985	GCA_001584415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/415/GCA_001584415.1_ASM158441v1	-	A4EZ703
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.86052	56.9	-	LEWO01	11	5925	5631	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280278	GCA_001031715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/715/GCA_001031715.1_Kleb_pneu_CHS135_V1	-	CHS135
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.95477	37.3	-	JUOP01	215	3024	2870	7/10/15	3/26/17	Contig	University of Washington	SAMN03198111	GCA_001059845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/845/GCA_001059845.1_ASM105984v1	26230489	903_EFLS
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14181	52.4	-	CQOD01	76	2523	2190	3/22/15	4/11/17	Scaffold	SC	SAMEA1690492	GCA_001145225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/225/GCA_001145225.1_8727_8_20	-	GCGS116
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	2.81176	38.3	-	LNOV01	150	2949	2763	2/17/16	3/27/17	Contig	Uppsala University	SAMN04270972	GCA_001563065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/065/GCA_001563065.1_ASM156306v1	-	VRE-1502913
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.75393	67.6	-	CSPV01	525	3752	3108	3/22/15	3/26/17	Scaffold	SC	SAMEA1931800	GCA_001199115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/115/GCA_001199115.1_5463_6_9	-	B338
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66006	31.4	-	FBHC01	24	1721	1625	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683250	GCA_001491915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/915/GCA_001491915.1_EC3390	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.03098	55.4	-	FKCJ01	35	4945	4710	4/6/16	3/28/17	Scaffold	SC	SAMEA2273137	GCA_900076705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/705/GCA_900076705.1_12045_4_17	-	e267
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15866	64.2	-	FSJI01	26	5154	5013	12/14/16	3/21/17	Contig	SC	SAMEA2070717	GCA_900136745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/745/GCA_900136745.1_10625_5_32	-	117
Pseudomonas sp. NFACC25	1566188	PRJEB16038	348491	Proteobacteria	Gammaproteobacteria	6.66619	61.2	-	FMUC01	34	6167	5977	10/17/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159437	GCA_900100935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/935/GCA_900100935.1_IMG-taxon_2599185288_annotated_assembly	-	NFACC25
Streptomyces sp. NBS 14/10	1945643	PRJNA362182	362182	Terrabacteria group	Actinobacteria	12.1472	70.8	-	NCSM01	127	10346	9455	7/24/17	7/28/17	Scaffold	University of Sao Paulo	SAMN06288443	GCA_002224125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/125/GCA_002224125.1_ASM222412v1	-	NBS 14/10
Streptomyces sp. SA15	934019	PRJNA401639	401639	Terrabacteria group	Actinobacteria	10.3563	70.3	-	NTGE01	222	9636	8613	9/12/17	9/14/17	Scaffold	Genetic of Microorganism Laboratory	SAMN07608010	GCA_002291145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/145/GCA_002291145.1_ASM229114v1	-	SA15
Pseudomonas sp. NFACC32-1	1566198	PRJEB16024	348505	Proteobacteria	Gammaproteobacteria	5.91207	62	-	FMUL01	47	5191	5043	10/17/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159507	GCA_900101215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/215/GCA_900101215.1_IMG-taxon_2599185312_annotated_assembly	-	NFACC32-1
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.11403	64.2	-	FVNQ01	13	5194	5035	3/10/17	3/18/17	Contig	SC	SAMEA2071237	GCA_900136755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/755/GCA_900136755.1_10625_5_30	-	115
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.34494	55.3	-	FKDD01	89	5336	5035	4/6/16	4/20/17	Scaffold	SC	SAMEA2273136	GCA_900076715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/715/GCA_900076715.1_12045_4_16	-	e264
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.69545	31.3	-	FBQD01	35	1772	1682	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683484	GCA_001491935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/935/GCA_001491935.1_H132580239	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.83239	67.8	-	CSNL01	544	3779	3256	3/23/15	3/26/17	Scaffold	SC	SAMEA751178	GCA_001199415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/415/GCA_001199415.1_5601_5_5	-	B309
Enterococcus faecium	1352	PRJNA308579	308579	Terrabacteria group	Firmicutes	2.94981	37.8	-	LQRS01	232	3051	2855	2/17/16	3/27/17	Contig	Austrian Agency for Health and Food Safety	SAMN04397503	GCA_001563205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/205/GCA_001563205.1_ASM156320v1	27056211	805447/07
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.10013	52.6	-	CQKI01	82	2470	2133	3/22/15	4/10/17	Scaffold	SC	SAMEA1690462	GCA_001145985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/985/GCA_001145985.1_8289_2_44	-	GCGS044
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.20197	37.1	-	JUNN01	258	3345	3156	7/10/15	3/26/17	Contig	University of Washington	SAMN03198139	GCA_001059885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/885/GCA_001059885.1_ASM105988v1	26230489	922_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.66367	57.1	-	LEWP01	6	5736	5475	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280280	GCA_001031725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/725/GCA_001031725.1_Kleb_pneu_CHS137_V1	-	CHS137
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.10459	45.3	-	LOHN01	48	4905	4699	3/21/16	3/19/17	Contig	Health Canada	SAMN04327443	GCA_001595565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/565/GCA_001595565.1_ASM159556v1	-	A4EZ927
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.29339	28.5	-	MOSZ01	620	4073	3800	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710894	GCA_002303365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/365/GCA_002303365.1_ASM230336v1	-	6610-N/ST10
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.02664	47.3	-	MWFL01	112	3908	3652	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263908	GCA_002097755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/755/GCA_002097755.1_ASM209775v1	28219321	CISM_300506
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.96281	68	-	LXAQ01	121	7250	6687	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208713	GCA_001979255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/255/GCA_001979255.1_ASM197925v1	-	MSHR1821
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.49277	50.7	-	CXEO01	473	4779	4255	7/16/15	2/24/17	Scaffold	SC	SAMEA954581	GCA_001252535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/535/GCA_001252535.1_5417_2_5	-	19984123_1361396
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.42238	38.3	-	FJAL01	46	3152	3024	2/20/16	3/27/17	Contig	SC	SAMEA2058278	GCA_900063045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/045/GCA_900063045.1_10771_1_19	-	2531STDY5467300
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04653	41.2	-	FIRI01	22	2051	1930	2/10/16	3/19/17	Contig	SC	SAMEA1566065	GCA_900050045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/045/GCA_900050045.1_8525_5_73	-	VS3513
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.05509	35.5	-	LCWA01	35	2121	1984	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435060	GCA_001016995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/995/GCA_001016995.1_ASM101699v1	25946017	GB-PW-041
Acinetobacter baumannii UH7707	1398981	PRJNA218782	218782	Proteobacteria	Gammaproteobacteria	4.04282	39	-	AYFG01	231	3951	3779	1/7/14	3/18/17	Contig	J. Craig Venter Institute	SAMN02597385	GCA_000516335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/335/GCA_000516335.2_gabuh7707_v01	24449752	UH7707
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.09374	66	-	JTVW01	95	6915	6664	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105513	GCA_000795065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/065/GCA_000795065.1_AZPAE14812	25367914	AZPAE14812
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.08126	52	-	CMXF01	157	2355	2071	3/22/15	3/21/17	Scaffold	SC	SAMEA1031651	GCA_001112125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/125/GCA_001112125.1_6714_1_24	-	NM1779
Helicobacter pylori SA175A	1345586	PRJEB4097	216055	Proteobacteria	delta/epsilon subdivisions	1.61241	38.5	-	CBPO01	40	1553	1418	9/21/13	3/24/17	Contig	MHH	SAMEA2272259	GCA_000476895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/895/GCA_000476895.1_SA175A	23898187	SA175A
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09933	39.5	-	CLFW01	50	2312	2092	3/21/15	3/4/17	Contig	SC	SAMEA1025699	GCA_001091165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/165/GCA_001091165.1_6925_3_14	-	SMRU2126
Escherichia coli	562	PRJEB5997	258622	Proteobacteria	Gammaproteobacteria	5.3357	50.8724	chromosome 1:NZ_LT632320.1/LT632320.1; plasmid p:NZ_LT632321.1/LT632321.1	-	2	5581	5180	11/17/16	2/25/17	Chromosome	SC	SAMEA2432036	GCA_900119685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/685/GCA_900119685.1_26578_F01	-	NCTC 13441
Mycobacterium tuberculosis TKK_05MA_0040	1448509	PRJNA235514	235514	Terrabacteria group	Actinobacteria	4.4077	65.6	-	JJWO01	77	4317	4130	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586004	GCA_000653175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/175/GCA_000653175.1_Myco_tube_TKK_05MA_0040_V1	-	TKK_05MA_0040
Staphylococcus epidermidis	1282	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.35764	31.9	-	DFVD01	50	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06451752	GCA_002380435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/380/435/GCA_002380435.1_ASM238043v1	28894102	-
Bacillus cereus	1396	PRJEB14962	336312	Terrabacteria group	Firmicutes	5.75742	35.1	-	FMBE01	20	6148	5697	8/3/16	6/16/17	Scaffold	INRA-MIG	SAMEA4361419	GCA_900094725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/725/GCA_900094725.1_ASM90009472v1	-	INRA Bc05-F1
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.06837	37.8	-	JPDB01	21	3157	3065	7/15/14	2/26/17	Contig	Cornell University	SAMN02741634	GCA_000729415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/415/GCA_000729415.1_ASM72941v1	-	FSL R8-7926
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66604	30.4	-	CUSB01	17	1757	1664	3/31/15	3/18/17	Contig	SC	SAMEA1010439	GCA_001232745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/745/GCA_001232745.1_7092_1_83	-	OXC6530
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121748	1412560	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007395.2/CP007395.2	-	1	4708	4451	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384281	GCA_000624875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/875/GCA_000624875.2_ASM62487v2	24786953	EC20121748
Staphylococcus aureus B40723	1157037	PRJNA88631	88631	Terrabacteria group	Firmicutes	2.85866	32.8	-	AIWX01	11	3025	2856	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792164	GCA_000363825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/825/GCA_000363825.1_Stap_aure_B40723_V1	-	B40723
Staphylococcus aureus B40950	1157038	PRJNA88633	88633	Terrabacteria group	Firmicutes	2.84156	32.9	-	AIWY01	5	2992	2822	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792165	GCA_000363845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/845/GCA_000363845.1_Stap_aure_B40950_V1	-	B40950
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121750	1412541	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007396.2/CP007396.2	-	1	4708	4448	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384262	GCA_000624895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/895/GCA_000624895.2_ASM62489v2	24786953	EC20121750
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70355	30.4	-	CUTC01	16	1820	1725	3/31/15	3/18/17	Contig	SC	SAMEA1401160	GCA_001232825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/825/GCA_001232825.1_7213_3_20	-	OXC6563
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.10581	37.8	-	JPCZ01	27	3198	3087	7/15/14	2/26/17	Contig	Cornell University	SAMN02741636	GCA_000729445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/445/GCA_000729445.1_ASM72944v1	-	FSL R8-8476
Bacillus cereus	1396	PRJEB14962	336312	Terrabacteria group	Firmicutes	5.87487	34.9	-	FMBG01	33	6287	5829	8/3/16	6/16/17	Scaffold	INRA-MIG	SAMEA4361532	GCA_900094745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/745/GCA_900094745.1_ASM90009474v1	-	WSBC_10311
Mycobacterium tuberculosis TKK_05MA_0044	1448512	PRJNA235517	235517	Terrabacteria group	Actinobacteria	4.41211	65.6	-	JJWN01	72	4323	4127	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586007	GCA_000653195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/195/GCA_000653195.1_Myco_tube_TKK_05MA_0044_V1	-	TKK_05MA_0044
Escherichia coli str. K-12 substr. MG1655star	879462	PRJNA51747	51747	Proteobacteria	Gammaproteobacteria	4.63964	50.7498	chromosome:NZ_CM000960.1/CM000960.1	AEFE01	1	4813	4439	9/2/10	2/22/17	Chromosome	OU Botany & Microbiology	SAMN02471201	GCA_000146735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/146/735/GCA_000146735.1_ASM14673v1	21422176	K-12 substr. MG1655star
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.03125	39.7	-	COEB02	99	2232	2024	3/22/15	3/11/17	Contig	SC	SAMEA1463199	GCA_001091265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/265/GCA_001091265.2_7622_4_39	-	LE4127
Helicobacter pylori SA165A	1345570	PRJEB4081	216077	Proteobacteria	delta/epsilon subdivisions	1.61689	38.8	-	CBQD01	36	1585	1405	9/21/13	3/24/17	Contig	MHH	SAMEA2272643	GCA_000476915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/915/GCA_000476915.1_SA165A	23898187	SA165A
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.04873	52.1	-	CMZV01	190	2285	2039	3/22/15	3/21/17	Scaffold	SC	SAMEA1031676	GCA_001112205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/205/GCA_001112205.1_6714_4_4	-	NM2439
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.47006	66.2	-	JTVV01	121	6225	6004	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105514	GCA_000795085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/085/GCA_000795085.1_AZPAE14813	25367914	AZPAE14813
Acinetobacter baumannii UH7807	1398982	PRJNA218783	218783	Proteobacteria	Gammaproteobacteria	4.04998	38.9	-	AYFF01	158	3939	3807	1/7/14	3/18/17	Contig	J. Craig Venter Institute	SAMN02597384	GCA_000516355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/355/GCA_000516355.2_gabuh7807_v01	24449752	UH7807
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.0944	35.5	-	LCWE01	25	2160	2020	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435064	GCA_001017015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/015/GCA_001017015.1_ASM101701v1	25946017	GB-PW-075
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.0368	41.2	-	FISP01	23	2046	1936	2/10/16	3/19/17	Contig	SC	SAMEA1566191	GCA_900050055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/055/GCA_900050055.1_8337_6_82	-	FX109
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.4932	38.3	-	FJAY01	24	3186	3062	2/20/16	3/27/17	Contig	SC	SAMEA2059862	GCA_900063055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/055/GCA_900063055.1_10771_1_27	-	2531STDY5467308
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.73742	50.7	-	CWTZ01	417	5461	4519	7/17/15	2/24/17	Scaffold	SC	SAMEA3345051	GCA_001252555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/555/GCA_001252555.1_H14132053801	-	53801ss_1
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.2208	68.1	-	LXAN01	179	7516	6898	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208710	GCA_001979275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/275/GCA_001979275.1_ASM197927v1	-	MSHR1286
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.19557	47.6	-	MWFP01	113	4062	3891	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263904	GCA_002097765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/765/GCA_002097765.1_ASM209776v1	28219321	CISM_S/Nida
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.15408	28.9	-	MOTB01	104	3850	3695	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710896	GCA_002303385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/385/GCA_002303385.1_ASM230338v1	-	6613-NonSp/ST3
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.20986	45.2	-	LPVU01	53	5092	4847	3/29/16	3/19/17	Contig	Health Canada	SAMN04358201	GCA_001601695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/695/GCA_001601695.1_ASM160169v1	-	C150
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.80347	56.9	-	LEWQ01	12	5892	5619	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280281	GCA_001031745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/745/GCA_001031745.1_Kleb_pneu_CHS138_V1	-	CHS138
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.03497	37.3	-	JUMJ01	140	3075	2940	7/10/15	3/26/17	Contig	University of Washington	SAMN03198169	GCA_001059895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/895/GCA_001059895.1_ASM105989v1	26230489	949_EFLS
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14894	52.4	-	CQMD01	74	2508	2195	3/23/15	4/11/17	Scaffold	SC	SAMEA1690339	GCA_001150465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/465/GCA_001150465.1_8727_8_7	-	GCGS103
Enterococcus faecium	1352	PRJNA305395	305395	Terrabacteria group	Firmicutes	2.69749	38.3	-	LOHT01	366	2737	2476	2/26/16	3/27/17	Contig	University of Leuven - KU Leuven	SAMN04325105	GCA_001576665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/665/GCA_001576665.1_ASM157666v1	-	LMG 8148
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.63323	67.2	-	CSNK01	972	3710	2809	3/22/15	3/26/17	Scaffold	SC	SAMEA1931870	GCA_001199955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/955/GCA_001199955.1_5463_7_9	-	B237
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66081	31.4	-	FBBW01	27	1724	1631	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683117	GCA_001491955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/955/GCA_001491955.1_EC5246a	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.70498	55.3	-	FKBY01	48	4653	4394	4/6/16	3/28/17	Scaffold	SC	SAMEA2273464	GCA_900076725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/725/GCA_900076725.1_12045_5_44	-	e2698
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.53624	63.9	-	FVNT01	11	5807	5605	3/10/17	3/18/17	Contig	SC	SAMEA2070817	GCA_900136785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/785/GCA_900136785.1_10625_5_38	-	123
Pseudomonas sp. NFACC37-1	1566196	PRJEB15737	347689	Proteobacteria	Gammaproteobacteria	6.68875	61	-	FMUZ01	96	5993	5732	10/17/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159391	GCA_900101575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/575/GCA_900101575.1_IMG-taxon_2599185323_annotated_assembly	-	NFACC37-1
Streptomyces sp. Tue6028	2036037	PRJNA348093	348093	Terrabacteria group	Actinobacteria	7.95761	71.6009	plasmid pTue6028:NZ_CM008277.1/CM008277.1	MLCE01	39	6918	6622	9/13/17	9/18/17	Scaffold	University of Freiburg	SAMN05900974	GCA_002300165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/165/GCA_002300165.1_ASM230016v1	-	Tue6028
Streptomyces sp. F-1	463642	PRJEB13412	320065	Terrabacteria group	Actinobacteria	8.1423	72.4	-	FKJI03	69	7364	7010	4/30/16	3/14/17	Scaffold	LABORATORIO NACIONAL DE CIENCIA E TECNOLOGIA DO BI	SAMEA3925434	GCA_900079405.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/405/GCA_900079405.3_Streptomyces_sp_F1_v3	-	-
Pseudomonas sp. NFACC44-2	1566202	PRJEB15692	347445	Proteobacteria	Gammaproteobacteria	6.77111	60.7	-	FMWA01	61	6124	5922	10/17/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159405	GCA_900102655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/655/GCA_900102655.1_IMG-taxon_2599185315_annotated_assembly	-	NFACC44-2
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.03842	64.1	-	FSJM01	20	5045	4918	12/14/16	4/2/17	Contig	SC	SAMEA2070308	GCA_900136805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/805/GCA_900136805.1_10625_5_40	-	125
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.62014	55.6	-	FKDB01	57	4527	4295	4/6/16	3/28/17	Scaffold	SC	SAMEA2273474	GCA_900076745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/745/GCA_900076745.1_12045_5_54	-	e272
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.6382	31.4	-	FBKE01	17	1696	1602	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683336	GCA_001491975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/975/GCA_001491975.1_p515B	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.75511	67.6	-	CSQG01	733	3778	3091	3/23/15	3/26/17	Scaffold	SC	SAMEA751359	GCA_001200055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/055/GCA_001200055.1_5476_2_10	-	B261
Enterococcus faecium	1352	PRJNA318315	318315	Terrabacteria group	Firmicutes	2.8402	38.1	-	LWHF01	106	3008	2679	5/26/16	3/28/17	Contig	National Centre for Cell Science	SAMN04784847	GCA_001652715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/715/GCA_001652715.1_ASM165271v1	-	17OM39
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14103	52.4	-	CQMH01	81	2504	2186	3/23/15	4/10/17	Scaffold	SC	SAMEA1690360	GCA_001150765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/765/GCA_001150765.1_8289_2_30	-	GCGS030
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.05681	37.2	-	JULA01	129	3145	2996	7/10/15	3/26/17	Contig	University of Washington	SAMN03198204	GCA_001060035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/035/GCA_001060035.1_ASM106003v1	26230489	983_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.91409	56.9	-	LEWR01	4	6003	5705	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280282	GCA_001031785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/785/GCA_001031785.1_Kleb_pneu_CHS139_V1	-	CHS139
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.02287	45.3	-	LRAI01	64	4836	4547	4/4/16	3/19/17	Contig	Health Canada	SAMN04417570	GCA_001608505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/505/GCA_001608505.1_ASM160850v1	-	May-33
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.37971	29.3	-	MOTD01	282	4173	3936	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710899	GCA_002303415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/415/GCA_002303415.1_ASM230341v1	-	6616-NonSp/novelST
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.01493	47.5	-	MWFO01	151	3891	3640	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263905	GCA_002097815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/815/GCA_002097815.1_ASM209781v1	28219321	CISM_1163068.5
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.19207	68.1	-	LXAO01	191	7482	6860	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208711	GCA_001979285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/285/GCA_001979285.1_ASM197928v1	-	MSHR1290
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.71176	50.7	-	CXFF01	375	5163	4536	7/16/15	2/24/17	Scaffold	SC	SAMEA954646	GCA_001252595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/595/GCA_001252595.1_6246_5_6	-	SS136782_2496123
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.58099	38.2	-	FJBV01	41	3301	3142	2/20/16	3/27/17	Contig	SC	SAMEA2059985	GCA_900063065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/065/GCA_900063065.1_10771_1_44	-	2531STDY5467325
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.11032	41.1	-	FIST01	25	2113	1998	2/10/16	3/19/17	Contig	SC	SAMEA1566053	GCA_900050065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/065/GCA_900050065.1_8337_6_96	-	FX147_3
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.11868	35.5	-	LCWC01	36	2194	2060	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435062	GCA_001017035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/035/GCA_001017035.1_ASM101703v1	25946017	GB-PW-051
Acinetobacter baumannii UH7907	1398983	PRJNA218784	218784	Proteobacteria	Gammaproteobacteria	4.01517	39	-	AYFE01	185	3869	3679	1/7/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597383	GCA_000516375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/375/GCA_000516375.1_gabuh7907_v01	24449752	UH7907
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.84348	66	-	JTVU01	82	6612	6404	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105515	GCA_000795105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/105/GCA_000795105.1_AZPAE14814	25367914	AZPAE14814
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05183	52.1	-	CNAA01	154	2301	2052	3/23/15	3/21/17	Scaffold	SC	SAMEA1031692	GCA_001112425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/425/GCA_001112425.1_6714_4_7	-	NM2602
Helicobacter pylori SA160C	1345561	PRJEB4072	216067	Proteobacteria	delta/epsilon subdivisions	1.65707	38.5	-	CBQF01	50	1605	1415	9/21/13	3/24/17	Contig	MHH	SAMEA2272334	GCA_000476935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/935/GCA_000476935.1_SA160C	23898187	SA160C
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12622	39.6	-	CMKR01	45	2374	2134	3/23/15	3/4/17	Contig	SC	SAMEA1029332	GCA_001091305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/305/GCA_001091305.1_7054_5_14	-	SMRU3062
Escherichia coli O157:H7 str. TW14588	502346	PRJNA28847	28847	Proteobacteria	Gammaproteobacteria	5.6712	50.4764	chromosome:NZ_CM000662.1/CM000662.1; plasmid pTW14588:NZ_DS999999.1/DS999999.1	ABKY02	2	12112	11438	3/3/08	2/22/17	Chromosome	J Craig Venter Institute	SAMN02436234	GCA_000155125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/125/GCA_000155125.1_ASM15512v1	-	TW14588
Mycobacterium tuberculosis TKK_05MA_0046	1448513	PRJNA235518	235518	Terrabacteria group	Actinobacteria	4.39051	65.6	-	JJWM01	84	4334	4111	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586008	GCA_000653215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/215/GCA_000653215.1_Myco_tube_TKK_05MA_0046_V1	-	TKK_05MA_0046
Bacillus cereus	1396	PRJEB14962	336312	Terrabacteria group	Firmicutes	5.60606	35.2	-	FMJI01	74	5978	5483	9/8/16	6/16/17	Scaffold	INRA-MIG	SAMEA4361531	GCA_900094755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/755/GCA_900094755.1_ASM90009475v1	-	INRA_SA'
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.08341	37.9	-	JPCW01	67	3133	3031	7/15/14	2/26/17	Contig	Cornell University	SAMN02741639	GCA_000729465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/465/GCA_000729465.1_ASM72946v1	-	FSL R8-9398
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.71785	30.4	-	CUIC01	18	1815	1705	3/31/15	3/18/17	Contig	SC	SAMEA1010291	GCA_001232925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/925/GCA_001232925.1_7038_3_20	-	OXC6269
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121751	1412540	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007397.2/CP007397.2	-	1	4709	4445	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384261	GCA_000624915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/915/GCA_000624915.2_ASM62491v2	24786953	EC20121751
Staphylococcus aureus B53639	1157036	PRJNA88629	88629	Terrabacteria group	Firmicutes	2.86393	32.9	-	AIWW01	6	3006	2835	4/9/13	3/2/17	Scaffold	Broad Institute	SAMN00792163	GCA_000363865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/363/865/GCA_000363865.1_Stap_aure_B53639_V1	-	B53639
Staphylococcus aureus M0075	1303780	PRJNA192841	192841	Terrabacteria group	Firmicutes	2.8715	32.8	-	AQFY01	5	3008	2847	4/8/13	3/2/17	Scaffold	Broad Institute	SAMN02596935	GCA_000364005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/005/GCA_000364005.1_Stap_aure_M0075_V1	-	M0075
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121753	1412551	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007398.2/CP007398.2	-	1	4707	4448	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384272	GCA_000624935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/935/GCA_000624935.2_ASM62493v2	24786953	EC20121753
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.7245	30.3	-	CUQK01	13	1831	1703	3/31/15	3/18/17	Contig	SC	SAMEA1010265	GCA_001232945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/945/GCA_001232945.1_7092_1_44	-	OXC6491
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09706	37.7	-	JPCY01	29	3188	3100	7/15/14	2/26/17	Contig	Cornell University	SAMN02741637	GCA_000729475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/475/GCA_000729475.1_ASM72947v1	-	FSL R8-8511
Bacillus cereus	1396	PRJEB14962	336312	Terrabacteria group	Firmicutes	6.10454	34.9	-	FMBH01	89	6481	6032	8/3/16	6/16/17	Scaffold	INRA-MIG	SAMEA4361424	GCA_900094775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/775/GCA_900094775.1_ASM90009477v1	-	INRA_ZB5-J
Mycobacterium tuberculosis TKK_05MA_0048	1448514	PRJNA235519	235519	Terrabacteria group	Actinobacteria	4.42635	65.6	-	JJWL01	66	4324	4145	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586009	GCA_000653235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/235/GCA_000653235.1_Myco_tube_TKK_05MA_0048_V1	-	TKK_05MA_0048
Escherichia coli TW10598	913091	PRJNA59743	59743	Proteobacteria	Gammaproteobacteria	5.09449	50.6647	chromosome:NZ_CM007915.1/CM007915.1; plasmid pTW10598_12:NZ_CM007916.1/CM007916.1; plasmid pTW10598_55:NZ_CM007917.1/CM007917.1	AELA02	37	5416	4896	11/15/10	5/24/17	Chromosome	Institute for Genome Sciences	SAMN02436015	GCA_000166535.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/535/GCA_000166535.3_ASM16653v3	21078854	TW10598
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11019	39.5	-	CLEN01	47	2318	2098	3/21/15	3/4/17	Contig	SC	SAMEA1026055	GCA_001091325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/325/GCA_001091325.1_6899_6_3	-	SMRU2067
Helicobacter pylori SA220C	1345600	PRJEB4111	216071	Proteobacteria	delta/epsilon subdivisions	1.66648	39	-	CBPX01	65	1622	1462	9/21/13	3/24/17	Contig	MHH	SAMEA2272600	GCA_000476955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/955/GCA_000476955.1_SA220C	23898187	SA220C
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.04692	52.1	-	CMZD01	160	2291	2050	3/23/15	3/17/17	Scaffold	SC	SAMEA1031685	GCA_001112805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/805/GCA_001112805.1_6714_3_3	-	NM2181
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.0301	65.9	-	JTVT01	104	6855	6635	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105516	GCA_000795115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/115/GCA_000795115.1_AZPAE14815	25367914	AZPAE14815
Acinetobacter baumannii CI86	1343072	PRJNA206988	206988	Proteobacteria	Gammaproteobacteria	4.39014	38.8	-	AVOB01	87	4286	4016	1/7/14	3/18/17	Contig	University of Texas at San Antonio	SAMN02597466	GCA_000516575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/575/GCA_000516575.2_ASM51657v2	24503987	CI86
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.09264	35.2	-	LCWD01	33	2166	2044	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435063	GCA_001017045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/045/GCA_001017045.1_ASM101704v1	25946017	GB-PW-067
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.11879	41.3	-	FIJX01	29	2057	1948	2/10/16	3/19/17	Contig	SC	SAMEA1316687	GCA_900050395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/395/GCA_900050395.1_7054_7_86	-	SS1028
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.35125	38.3	-	FJGG01	23	3058	2944	2/20/16	3/28/17	Contig	SC	SAMEA2077486	GCA_900063075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/075/GCA_900063075.1_10625_2_6	-	2532STDY5467479
Shigella sonnei	624	PRJEB2075	203826	Proteobacteria	Gammaproteobacteria	4.90175	50.5	-	CXMG01	450	5567	4720	7/16/15	2/24/17	Scaffold	SC	SAMEA1559972	GCA_001252615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/615/GCA_001252615.1_8489_2_87	-	44964030
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.39727	67.9	-	LXAS01	222	7668	7014	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208715	GCA_001979325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/325/GCA_001979325.1_ASM197932v1	-	MSHR1300
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.19452	47.6	-	MWFQ01	112	4049	3887	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263903	GCA_002097825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/825/GCA_002097825.1_ASM209782v1	28219321	CISM_780298.0
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.02633	28.6	-	MOTC01	165	3692	3463	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710898	GCA_002303425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/425/GCA_002303425.1_ASM230342v1	-	6615-NonSp/ST11
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.15169	45.2	-	LRAJ01	41	5017	4793	4/4/16	3/19/17	Contig	Health Canada	SAMN04417571	GCA_001608525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/525/GCA_001608525.1_ASM160852v1	-	Sep-36
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.57313	57.2	-	LEWS01	7	5556	5305	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280283	GCA_001031795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/795/GCA_001031795.1_Kleb_pneu_CHS140_V1	-	CHS140
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.76372	37.5	-	JUNQ01	113	2765	2663	7/10/15	3/26/17	Contig	University of Washington	SAMN03198135	GCA_001075715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/715/GCA_001075715.1_ASM107571v1	26230489	920_EFLS
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14229	52.5	-	CQOV01	69	2509	2193	3/22/15	4/11/17	Scaffold	SC	SAMEA1690453	GCA_001154185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/185/GCA_001154185.1_8289_2_50	-	GCGS050
Enterococcus faecium	1352	PRJNA321914	321914	Terrabacteria group	Firmicutes	2.9792	37.8	-	MBRH01	297	3054	2869	11/1/16	3/28/17	Contig	UCIBIO/REQUIMTE. Faculdade de Farmacia. Universidade do Porto.	SAMN05006656	GCA_001858355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/355/GCA_001858355.1_ASM185835v1	-	HPH2
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.79502	67.8	-	CSQO01	495	3755	3218	3/22/15	3/26/17	Scaffold	SC	SAMEA751456	GCA_001200095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/095/GCA_001200095.1_5476_8_7	-	B282
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.82821	31.1	-	FAZD01	44	1919	1796	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683046	GCA_001491995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/995/GCA_001491995.1_H102520382	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.79333	55	-	FKCF01	73	4722	4453	4/6/16	3/28/17	Scaffold	SC	SAMEA2273467	GCA_900076755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/755/GCA_900076755.1_12045_5_47	-	e2752
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.36713	64.1	-	FVNS01	93	5481	5261	3/10/17	3/18/17	Contig	SC	SAMEA2070307	GCA_900136815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/815/GCA_900136815.1_10625_5_37	-	122
Pseudomonas sp. NFIX46	1566234	PRJEB15696	347441	Proteobacteria	Gammaproteobacteria	6.37919	60.6	-	FMVX01	18	5786	5638	10/17/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159313	GCA_900102735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/735/GCA_900102735.1_IMG-taxon_2603880185_annotated_assembly	-	NFIX46
Streptomyces sp. F-7	573566	PRJEB13412	320065	Terrabacteria group	Actinobacteria	7.43664	72.7	-	FKJH01	76	6684	6367	4/30/16	8/2/17	Scaffold	LABORATORIO NACIONAL DE CIENCIA E TECNOLOGIA DO BI	SAMEA3925435	GCA_900079415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/415/GCA_900079415.1_Streptomyces_sp._F7	-	-
Streptomyces sp. OspMP-M45	1115570	PRJEB14425	325903	Terrabacteria group	Actinobacteria	7.40792	72.1	-	FLTP01	53	6543	6208	7/8/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02746034	GCA_900090065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/090/065/GCA_900090065.1_IMG-taxon_2513237100_annotated_assembly	-	OspMP-M45
Pseudomonas sp. NFPP17	1566227	PRJEB16105	348605	Proteobacteria	Gammaproteobacteria	6.84452	63.5	-	FMWI01	27	6269	6137	10/17/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159460	GCA_900102935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/102/935/GCA_900102935.1_IMG-taxon_2599185181_annotated_assembly	-	NFPP17
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.53613	63.9	-	FVNV01	14	5808	5604	3/10/17	3/18/17	Contig	SC	SAMEA2071240	GCA_900136825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/825/GCA_900136825.1_10625_5_39	-	124
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.98365	55.4	-	FKBV01	39	4885	4639	4/6/16	3/28/17	Scaffold	SC	SAMEA2273466	GCA_900076765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/765/GCA_900076765.1_12045_5_46	-	e2743
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.83568	30.9	-	FBAS01	102	1928	1795	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683072	GCA_001492015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/015/GCA_001492015.1_H132580228	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.83548	67.9	-	CSRM01	274	3673	3322	3/23/15	3/26/17	Scaffold	SC	SAMEA751162	GCA_001200175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/175/GCA_001200175.1_5515_8_6	-	B070
Enterococcus faecium	1352	PRJNA321918	321918	Terrabacteria group	Firmicutes	2.58684	38	-	MBRI01	114	2649	2456	11/1/16	3/28/17	Contig	UCIBIO/REQUIMTE. Faculdade de Farmacia. Universidade do Porto.	SAMN05006670	GCA_001858385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/385/GCA_001858385.1_ASM185838v1	-	TCGEHPH2.1
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.19242	52.3	-	CQIR01	73	2560	2245	3/23/15	4/10/17	Scaffold	SC	SAMEA1690337	GCA_001155665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/665/GCA_001155665.1_8727_8_54	-	GCGS150
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.17273	37.1	-	JUNL01	472	3375	3104	7/10/15	3/26/17	Contig	University of Washington	SAMN03198141	GCA_001075895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/895/GCA_001075895.1_ASM107589v1	26230489	923_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.90457	56.9	-	LEWT01	15	5996	5709	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280284	GCA_001031805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/805/GCA_001031805.1_Kleb_pneu_CHS141_V1	-	CHS141
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.07662	45.3	-	LRJZ01	34	4899	4670	4/4/16	3/19/17	Contig	Health Canada	SAMN04422095	GCA_001608545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/545/GCA_001608545.1_ASM160854v1	-	M59787
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.22158	28.4	-	MPJQ01	105	3876	3727	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710900	GCA_002303445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/445/GCA_002303445.1_ASM230344v1	-	6617-A/ST43
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.19049	47.6	-	MWFR01	96	4050	3886	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263902	GCA_002097835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/835/GCA_002097835.1_ASM209783v1	28219321	CISM_770180.8
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.96223	68	-	LXAR01	140	7266	6690	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208714	GCA_001979335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/335/GCA_001979335.1_ASM197933v1	-	MSHR3042
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.73026	50.7	-	CXKF01	381	5352	4555	7/16/15	2/24/17	Scaffold	SC	SAMEA2003439	GCA_001252635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/635/GCA_001252635.1_8290_4_39	-	99441
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.44641	38.3	-	FJHE01	20	3161	3047	2/20/16	3/27/17	Contig	SC	SAMEA2077530	GCA_900063085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/085/GCA_900063085.1_10625_2_28	-	2532STDY5467501
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.07757	41.2	-	FIJY01	28	2106	1995	2/10/16	3/19/17	Contig	SC	SAMEA1316595	GCA_900050405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/405/GCA_900050405.1_7054_7_33	-	SS1029
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.04403	35.3	-	LDAD01	18	2102	1979	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435109	GCA_001017075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/075/GCA_001017075.1_ASM101707v1	25946017	SH0657
Acinetobacter baumannii CI77	1343075	PRJNA206987	206987	Proteobacteria	Gammaproteobacteria	4.02861	39.1	-	AVOC01	80	3961	3748	1/7/14	3/18/17	Contig	University of Texas at San Antonio	SAMN02597467	GCA_000516595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/595/GCA_000516595.2_ASM51659v2	24503987	CI77
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.73824	66.1	-	JTVS01	99	6454	6233	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105517	GCA_000795145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/145/GCA_000795145.1_AZPAE14816	25367914	AZPAE14816
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05841	52.1	-	CMXJ01	148	2319	2060	3/22/15	3/21/17	Scaffold	SC	SAMEA1031662	GCA_001113425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/425/GCA_001113425.1_6714_1_16	-	NM1561
Helicobacter pylori SA45C	1345534	PRJEB4054	216001	Proteobacteria	delta/epsilon subdivisions	1.64098	39	-	CBPR01	47	1615	1446	9/21/13	3/24/17	Contig	MHH	SAMEA2272102	GCA_000476975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/975/GCA_000476975.1_SA45C	23898187	SA45C
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.10989	39.5	-	CMQS01	59	2330	2099	3/22/15	3/4/17	Contig	SC	SAMEA2062159	GCA_001091405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/405/GCA_001091405.1_9803_8_26	-	23F
Escherichia coli UMNF18	1050617	PRJNA48455	48455	Proteobacteria	Gammaproteobacteria	5.6353	50.5806	chromosome:NZ_AGTD01000001.1/AGTD01000001.1; plasmid pUMNF18_103:NZ_AGTD01000005.1/AGTD01000005.1; plasmid pUMNF18_32:NZ_AGTD01000006.1/AGTD01000006.1; plasmid pUMNF18_87:NZ_AGTD01000003.1/AGTD01000003.1; plasmid pUMNF18_IncFV:NZ_AGTD01000004.1/AGTD01000004.1; plasmid pUMNF18_IncI1:NZ_AGTD01000002.1/AGTD01000002.1	AGTD01	6	6117	5600	11/1/11	2/22/17	Chromosome	University of Minnesota	SAMN02471895	GCA_000220005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/005/GCA_000220005.2_ASM22000v2	22081385	UMNF18
Mycobacterium tuberculosis TKK_05MA_0052	1448517	PRJNA235522	235522	Terrabacteria group	Actinobacteria	4.39436	65.6	-	JJWJ01	83	4330	4113	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586012	GCA_000653255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/255/GCA_000653255.1_Myco_tube_TKK_05MA_0052_V1	-	TKK_05MA_0052
Bacillus cereus	1396	PRJEB14962	336312	Terrabacteria group	Firmicutes	5.74174	35.3	-	FMBJ01	34	6125	5749	8/3/16	6/16/17	Scaffold	INRA-MIG	SAMEA4361353	GCA_900094815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/815/GCA_900094815.1_ASM90009481v1	-	NVH 0861-00
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.12224	37.9	-	JPCX01	27	3164	3065	7/15/14	2/26/17	Contig	Cornell University	SAMN02741638	GCA_000729485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/485/GCA_000729485.1_ASM72948v1	-	FSL R8-8816
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70322	30.4	-	CUVP01	27	1813	1728	3/31/15	3/18/17	Contig	SC	SAMEA1400820	GCA_001232965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/965/GCA_001232965.1_7213_3_84	-	OXC6629
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120734	1412609	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68602	52.2	chromosome:NZ_CP007400.2/CP007400.2	-	1	4708	4449	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384330	GCA_000624955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/955/GCA_000624955.2_ASM62495v2	24786953	EC20120734
Staphylococcus aureus M0294	1303781	PRJNA192842	192842	Terrabacteria group	Firmicutes	2.91424	33	-	AQFZ01	10	3052	2885	4/8/13	3/3/17	Scaffold	Broad Institute	SAMN02596936	GCA_000364025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/025/GCA_000364025.1_Stap_aure_M0294_V1	-	M0294
Staphylococcus aureus M1060	1303782	PRJNA192843	192843	Terrabacteria group	Firmicutes	2.90736	33	-	AQGA01	5	3034	2872	4/8/13	3/3/17	Scaffold	Broad Institute	SAMN02596937	GCA_000364045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/045/GCA_000364045.1_Stap_aure_M1060_V1	-	M1060
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120738	1412610	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007401.2/CP007401.2	-	1	4707	4448	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384331	GCA_000624975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/975/GCA_000624975.2_ASM62497v2	24786953	EC20120738
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64427	30.4	-	CUIM01	9	1730	1624	3/31/15	3/18/17	Contig	SC	SAMEA1010553	GCA_001233005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/005/GCA_001233005.1_7038_3_30	-	OXC6279
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.05882	37.8	-	JPCD01	29	3124	3032	7/15/14	2/26/17	Contig	Cornell University	SAMN02741617	GCA_000729505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/505/GCA_000729505.1_ASM72950v1	-	FSL R8-7722
Bacillus cereus	1396	PRJEB14962	336312	Terrabacteria group	Firmicutes	5.42465	35.4	-	FMJJ01	39	5789	5423	10/5/16	6/16/17	Scaffold	INRA-MIG	SAMEA4361423	GCA_900094825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/825/GCA_900094825.1_ASM90009482v1	-	RIVM_BC126
Mycobacterium tuberculosis TKK_05MA_0056	1448520	PRJNA235525	235525	Terrabacteria group	Actinobacteria	4.40934	65.6	-	JJWH01	78	4326	4133	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586015	GCA_000653275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/275/GCA_000653275.1_Myco_tube_TKK_05MA_0056_V1	-	TKK_05MA_0056
Escherichia coli str. K-12 substr. MG1655	511145	PRJNA40075	40075	Proteobacteria	Gammaproteobacteria	4.63897	50.8	chromosome:NZ_AKBV01000001.1/AKBV01000001.1	AKBV01	1	4792	4485	6/15/12	5/18/17	Chromosome	Broad Institute	SAMN02596920	GCA_000269645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/645/GCA_000269645.2_PB_Esch_coli_MG12655_V1	22829535	K-12 substr. MG1655
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.17004	39.6	-	CLGR01	47	2374	2129	3/21/15	3/4/17	Contig	SC	SAMEA1026252	GCA_001091545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/545/GCA_001091545.1_6925_4_4	-	SMRU2140
Helicobacter pylori SA36C	1345523	PRJEB4048	215919	Proteobacteria	delta/epsilon subdivisions	1.64061	38.5	-	CBQI01	57	1602	1440	9/21/13	3/24/17	Contig	MHH	SAMEA2272234	GCA_000476995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/995/GCA_000476995.1_SA36C	23898187	SA36C
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05494	52.1	-	CMXL01	197	2318	2052	3/22/15	3/21/17	Scaffold	SC	SAMEA1031738	GCA_001116265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/265/GCA_001116265.1_6714_1_22	-	NM1757
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.29592	66.5	-	JTVR01	50	6012	5856	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105518	GCA_000795165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/165/GCA_000795165.1_AZPAE14817	25367914	AZPAE14817
Acinetobacter baumannii CI78	1343073	PRJNA206973	206973	Proteobacteria	Gammaproteobacteria	3.87317	38.7	-	AVOE01	36	3738	3576	1/7/14	3/18/17	Contig	University of Texas at San Antonio	SAMN02597469	GCA_000516615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/615/GCA_000516615.2_ASM51661v2	24503987	CI78
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.10825	35.3	-	LDAE01	25	2177	2051	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435110	GCA_001017085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/085/GCA_001017085.1_ASM101708v1	25946017	SH0660
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.03262	41.1	-	FIKY01	25	2028	1922	2/10/16	3/19/17	Contig	SC	SAMEA1316692	GCA_900050415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/415/GCA_900050415.1_7054_7_54	-	SS1063
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.4146	38.3	-	FJHF01	25	3119	3012	2/20/16	3/27/17	Contig	SC	SAMEA2077495	GCA_900063095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/095/GCA_900063095.1_10625_2_33	-	2532STDY5467506
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.67227	50.6	-	CXEI01	409	5057	4479	7/16/15	2/24/17	Scaffold	SC	SAMEA954540	GCA_001252655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/655/GCA_001252655.1_5417_2_12	-	CS14_1361403
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.07774	68.1	-	LXAT01	168	7338	6743	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208716	GCA_001979345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/345/GCA_001979345.1_ASM197934v1	-	MSHR0087
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.19326	47.6	-	MWFS01	111	4052	3896	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263901	GCA_002097845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/845/GCA_002097845.1_ASM209784v1	28219321	CISM_770067.4
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.12097	28.5	-	MOTE01	250	3752	3589	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710901	GCA_002303465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/465/GCA_002303465.1_ASM230346v1	-	6618-NonSp/ST53
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.16995	45.2	-	LRFL01	55	5027	4769	4/4/16	3/19/17	Contig	Health Canada	SAMN04422010	GCA_001608575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/575/GCA_001608575.1_ASM160857v1	-	Sep-65
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.7302	56.9	-	LEWU01	12	5822	5531	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280285	GCA_001031825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/825/GCA_001031825.1_Kleb_pneu_CHS142_V1	-	CHS142
Enterococcus faecalis	1351	PRJNA278346	278346	Terrabacteria group	Firmicutes	2.91574	37.3	-	LAEB01	18	2980	2856	8/10/15	3/26/17	Contig	Shihezi University	SAMN03417991	GCA_001263775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/775/GCA_001263775.1_ASM126377v1	-	XJ05
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.1344	52.5	-	CQJZ01	70	2495	2189	3/23/15	4/11/17	Scaffold	SC	SAMEA1677297	GCA_001155685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/685/GCA_001155685.1_8727_5_66	-	GCGS216
Enterococcus faecium	1352	PRJNA321919	321919	Terrabacteria group	Firmicutes	2.44352	38.3	-	MBRG01	214	2455	2264	11/1/16	3/28/17	Contig	UCIBIO/REQUIMTE. Faculdade de Farmacia. Universidade do Porto.	SAMN05006671	GCA_001858405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/405/GCA_001858405.1_ASM185840v1	-	GE1
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.67935	67.4	-	CSQE01	849	3714	2916	3/22/15	3/26/17	Scaffold	SC	SAMEA1986110	GCA_001200315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/315/GCA_001200315.1_5463_5_10	-	B339
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66018	31.4	-	FAZK01	18	1719	1626	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683034	GCA_001492035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/035/GCA_001492035.1_EC3756	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.68206	55.7	-	FKBU01	17	4524	4360	4/6/16	3/28/17	Scaffold	SC	SAMEA2273468	GCA_900076775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/775/GCA_900076775.1_12045_5_48	-	e2760
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.03802	64.1	-	FSJL01	19	5047	4910	12/14/16	3/21/17	Contig	SC	SAMEA2070818	GCA_900136845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/845/GCA_900136845.1_10625_5_41	-	126
Pseudomonas sp. NFPP12	1566208	PRJEB16273	348863	Proteobacteria	Gammaproteobacteria	6.99516	63.3	-	FMWW01	22	6364	6206	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159465	GCA_900103205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/205/GCA_900103205.1_IMG-taxon_2599185163_annotated_assembly	-	NFPP12
Streptomyces sp. MnatMP-M77	1100827	PRJEB14426	325907	Terrabacteria group	Actinobacteria	8.6487	72.2	-	FLTQ01	52	7390	7077	7/8/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02746036	GCA_900090075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/090/075/GCA_900090075.1_IMG-taxon_2513237108_annotated_assembly	-	MnatMP-M77
Streptomyces sp. Ncost-T6T-1	1100828	PRJEB14427	325908	Terrabacteria group	Actinobacteria	8.09903	71.6	-	FLTR01	64	7190	6896	7/6/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02746059	GCA_900090085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/090/085/GCA_900090085.1_IMG-taxon_2513237109_annotated_assembly	-	Ncost-T6T-1
Pseudomonas sp. NFPP15	1566205	PRJEB16175	348944	Proteobacteria	Gammaproteobacteria	6.83163	63.5	-	FMXL01	29	6257	6119	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159464	GCA_900103335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/335/GCA_900103335.1_IMG-taxon_2599185186_annotated_assembly	-	NFPP15
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.03828	64.1	-	FSJO01	18	5039	4910	12/14/16	4/2/17	Contig	SC	SAMEA2070411	GCA_900136855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/855/GCA_900136855.1_10625_5_43	-	128
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.1068	55.2	-	FKCN01	46	5013	4794	4/6/16	3/28/17	Scaffold	SC	SAMEA2273469	GCA_900076785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/785/GCA_900076785.1_12045_5_49	-	e2761
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.58871	31.7	-	FBKO01	28	1588	1527	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683341	GCA_001492075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/075/GCA_001492075.1_H072620566	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.81184	67.9	-	CSRF01	289	3669	3290	3/22/15	3/26/17	Scaffold	SC	SAMEA2015292	GCA_001200435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/435/GCA_001200435.1_5463_5_12	-	B340
Enterococcus faecium	1352	PRJNA355170	355170	Terrabacteria group	Firmicutes	3.23051	37.4	-	MQRF01	207	3435	3148	12/9/16	3/28/17	Contig	Institute of Experimental Medicine	SAMN06065846	GCA_001896235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/235/GCA_001896235.1_ASM189623v1	-	4686
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.15039	52.4	-	CQKM01	71	2530	2195	3/23/15	4/10/17	Scaffold	SC	SAMEA1677481	GCA_001156545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/545/GCA_001156545.1_8727_5_53	-	GCGS203
Enterococcus faecalis	1351	PRJNA296376	296376	Terrabacteria group	Firmicutes	3.14674	37.1	-	LKGR01	42	3207	3036	10/20/15	3/27/17	Contig	Federal University of Rio Grande do Sul	SAMN04100212	GCA_001400055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/055/GCA_001400055.1_ASM140005v1	26769928	P8-1
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.55973	57.2	-	LEWV01	6	5643	5385	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280286	GCA_001031865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/865/GCA_001031865.1_Kleb_pneu_CHS144_V1	-	CHS144
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.07711	45.3	-	LRFY01	34	4903	4671	4/4/16	3/19/17	Contig	Health Canada	SAMN04422054	GCA_001608595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/595/GCA_001608595.1_ASM160859v1	-	H11523
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.17426	28.6	-	MOTF01	206	3827	3673	9/14/17	9/18/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710902	GCA_002303485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/485/GCA_002303485.1_ASM230348v1	-	6619-CF/ST37
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.1939	47.6	-	MWFV01	93	4050	3892	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263898	GCA_002097895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/895/GCA_002097895.1_ASM209789v1	28219321	CISM_710180.8
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.08803	68.2	-	LXAU01	159	7367	6783	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208719	GCA_001979385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/385/GCA_001979385.1_ASM197938v1	-	MSHR1088
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.72153	50.5	-	CWSW01	423	5467	4451	7/16/15	2/24/17	Scaffold	SC	SAMEA3345015	GCA_001252695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/695/GCA_001252695.1_H14030023601	-	23601ss_1
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.44107	38.3	-	FJHG01	22	3152	3044	2/20/16	3/27/17	Contig	SC	SAMEA2077526	GCA_900063105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/105/GCA_900063105.1_10625_2_13	-	2532STDY5467486
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.04253	41.1	-	FILP01	31	2053	1951	2/10/16	3/19/17	Contig	SC	SAMEA1316521	GCA_900050425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/425/GCA_900050425.1_7054_7_65	-	SS982
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.07347	35.2	-	LCVD01	23	2134	2007	6/1/15	3/17/17	Contig	Novartis Vaccines	SAMN03435044	GCA_001017115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/115/GCA_001017115.1_ASM101711v1	25946017	ES-PW-080
Acinetobacter baumannii CI79	1343074	PRJNA206979	206979	Proteobacteria	Gammaproteobacteria	4.38341	38.8	-	AVOD01	84	4298	4045	1/7/14	3/18/17	Contig	University of Texas at San Antonio	SAMN02597468	GCA_000516635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/635/GCA_000516635.2_ASM51663v2	24503987	CI79
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.30359	66.4	-	JTVQ01	97	6002	5799	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105519	GCA_000795185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/185/GCA_000795185.1_AZPAE14818	25367914	AZPAE14818
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05826	52.1	-	CMYB01	157	2301	2062	3/23/15	3/17/17	Scaffold	SC	SAMEA1031670	GCA_001116645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/645/GCA_001116645.1_6714_2_16	-	NM1928
Helicobacter pylori SA174A	1345585	PRJEB4096	216084	Proteobacteria	delta/epsilon subdivisions	1.65264	38.5	-	CBPS01	91	1603	1433	9/21/13	3/24/17	Contig	MHH	SAMEA2272097	GCA_000477015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/015/GCA_000477015.1_SA174A	23898187	SA174A
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.03479	39.7	-	CPPG01	69	2233	2002	3/23/15	3/4/17	Contig	SC	SAMEA1020331	GCA_001091645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/645/GCA_001091645.1_6187_5_23	-	LMG1270
Escherichia coli str. K-12 substr. MG1655	511145	PRJNA40075	40075	Proteobacteria	Gammaproteobacteria	4.63897	50.8	chromosome:NZ_AKVX01000001.1/AKVX01000001.1	AKVX01	1	4792	4485	6/25/12	5/18/17	Chromosome	Broad Institute	SAMN02597081	GCA_000273425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/273/425/GCA_000273425.1_Esch_coli_MG12655_V1	22829535	K-12 substr. MG1655
Mycobacterium tuberculosis TKK_05MA_0058	1448521	PRJNA235526	235526	Terrabacteria group	Actinobacteria	4.40521	65.6	-	JJWG01	76	4333	4142	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586016	GCA_000653295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/295/GCA_000653295.1_Myco_tube_TKK_05MA_0058_V1	-	TKK_05MA_0058
Bacillus cereus	1396	PRJEB14962	336312	Terrabacteria group	Firmicutes	5.2215	35.3	-	FMJM01	40	5579	5266	9/15/16	6/15/17	Scaffold	INRA-MIG	SAMEA4361355	GCA_900094845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/845/GCA_900094845.1_ASM90009484v1	-	NVH 0674-98
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.04783	37.8	-	JPDD01	95	3119	3009	7/15/14	2/26/17	Contig	Cornell University	SAMN02741632	GCA_000729545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/545/GCA_000729545.1_ASM72954v1	-	FSL R8-7902
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69707	30.4	-	CUUR01	20	1816	1706	3/31/15	3/18/17	Contig	SC	SAMEA1400964	GCA_001233025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/025/GCA_001233025.1_7213_3_60	-	OXC6603
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120765	1412564	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68598	52.2	chromosome:NZ_CP007402.2/CP007402.2	-	1	4707	4447	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384285	GCA_000624995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/624/995/GCA_000624995.2_ASM62499v2	24786953	EC20120765
Staphylococcus aureus M1078	1303783	PRJNA192844	192844	Terrabacteria group	Firmicutes	2.88224	33	-	AQGB01	6	2987	2815	4/8/13	3/3/17	Scaffold	Broad Institute	SAMN02596938	GCA_000364065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/065/GCA_000364065.1_Stap_aure_M1078_V1	-	M1078
Staphylococcus aureus M1193	1303784	PRJNA192845	192845	Terrabacteria group	Firmicutes	2.87341	32.9	-	AQGC01	3	3005	2848	4/8/13	3/3/17	Scaffold	Broad Institute	SAMN02596939	GCA_000364085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/085/GCA_000364085.1_Stap_aure_M1193_V1	-	M1193
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120773	1412611	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007403.2/CP007403.2	-	1	4707	4444	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384332	GCA_000625015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/015/GCA_000625015.2_ASM62501v2	24786953	EC20120773
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66899	30.3	-	CUQX01	17	1770	1645	3/31/15	3/18/17	Contig	SC	SAMEA1010631	GCA_001233065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/065/GCA_001233065.1_7092_1_56	-	OXC6503
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09461	37.9	-	JPCU01	19	3147	3045	7/15/14	2/26/17	Contig	Cornell University	SAMN02741641	GCA_000729555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/555/GCA_000729555.1_ASM72955v1	-	FSL R8-9402
Bacillus cereus	1396	PRJEB14962	336312	Terrabacteria group	Firmicutes	5.85814	35	-	FMJO01	117	6215	5793	9/15/16	6/16/17	Scaffold	INRA-MIG	SAMEA4361358	GCA_900094855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/855/GCA_900094855.1_ASM90009485v1	-	RIVM_BC938
Mycobacterium tuberculosis TKK_05MA_2005	1448522	PRJNA235527	235527	Terrabacteria group	Actinobacteria	4.40123	65.6	-	JJWF01	1	4278	4113	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586017	GCA_000653315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/315/GCA_000653315.1_Myco_tube_TKK_05MA_2005_V1	-	TKK_05MA_2005
Escherichia coli PMV-1	1382700	PRJEB4437	214779	Proteobacteria	Gammaproteobacteria	5.21093	50.6741	chromosome:NC_022370.1/HG428755.1; plasmid pECOS88like:NZ_CBTO000000000.1/CBTO000000000.1; plasmid pECOS88like contig 1:NZ_CBTO010000001.1/CBTO010000001.1; plasmid pECOS88like contig 2:NZ_CBTO010000002.1/CBTO010000002.1; plasmid pHUSEC411like:NC_022371.1/HG428756.1	CBTO01	4	5573	5192	9/18/13	2/23/17	Chromosome	ULB	SAMEA2272347	GCA_000493595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/595/GCA_000493595.1_EcoPMV1	-	PMV-1
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.01827	39.6	-	CPLB01	61	2207	1982	3/23/15	3/11/17	Contig	SC	SAMEA770021	GCA_001091805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/805/GCA_001091805.1_5242_2_10	-	18F/1
Helicobacter pylori SA194A	1345588	PRJEB4099	216057	Proteobacteria	delta/epsilon subdivisions	1.5652	38.7	-	CBPW01	46	1524	1378	9/21/13	3/24/17	Contig	MHH	SAMEA2271981	GCA_000477055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/055/GCA_000477055.1_SA194A	23898187	SA194A
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.07095	52.1	-	CMXT01	156	2323	2065	3/23/15	3/21/17	Scaffold	SC	SAMEA1031742	GCA_001117325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/325/GCA_001117325.1_6714_2_14	-	NM1919
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.66054	66.2	-	JTVP01	98	6404	6193	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105520	GCA_000795205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/205/GCA_000795205.1_AZPAE14819	25367914	AZPAE14819
Acinetobacter baumannii UH2107	1398965	PRJNA218766	218766	Proteobacteria	Gammaproteobacteria	3.9684	39.0727	plasmid pABUH4-111:NZ_AYFW01000101.1/AYFW01000101.1	AYFW01	156	3841	3691	1/10/14	3/18/17	Contig	J. Craig Venter Institute	SAMN02597401	GCA_000517485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/485/GCA_000517485.2_gabuh2107_v01	24449752	UH2107
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.03585	35.2	-	LBKD01	27	2102	1970	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435030	GCA_001017835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/835/GCA_001017835.1_ASM101783v1	25946017	DK-PW-089
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.03335	41.2	-	FILW01	26	2032	1921	2/10/16	3/19/17	Contig	SC	SAMEA1316636	GCA_900050435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/435/GCA_900050435.1_7054_7_72	-	SS992
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54104	38.3	-	FJJS01	65	3235	3089	2/20/16	3/28/17	Contig	SC	SAMEA2080686	GCA_900063115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/115/GCA_900063115.1_10625_2_85	-	2532STDY5467558
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.67769	50.7	-	CWYR01	387	5186	4484	7/16/15	2/24/17	Scaffold	SC	SAMEA2445722	GCA_001252715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/715/GCA_001252715.1_12971_8_37	-	H103240103
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.28904	68	-	LXAW01	165	7612	6970	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208721	GCA_001979405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/405/GCA_001979405.1_ASM197940v1	-	MSHR1888
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.03426	47.5	-	MWFU01	89	3838	3683	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263899	GCA_002097905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/905/GCA_002097905.1_ASM209790v1	28219321	CISM_740115.4
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.3427	28.3	-	MOTG01	131	4056	3885	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710903	GCA_002303505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/505/GCA_002303505.1_ASM230350v1	-	6620-N/ST10
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.08053	45.3	-	LRFZ01	33	4909	4678	4/4/16	3/19/17	Contig	Health Canada	SAMN04422094	GCA_001608615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/615/GCA_001608615.1_ASM160861v1	-	H64024
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.48636	57.3	-	LEWW01	12	5451	5163	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280287	GCA_001031875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/875/GCA_001031875.1_Kleb_pneu_CHS145_V1	-	CHS145
Enterococcus faecalis NBRC 100480	1218089	PRJDB262	172085	Terrabacteria group	Firmicutes	2.83321	37.5	-	BCQC01	37	2905	2781	1/28/16	3/27/17	Contig	National Institute of Technology and Evaluation	SAMD00045729	GCA_001544235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/235/GCA_001544235.1_ASM154423v1	-	NBRC 100480
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.0955	52.6	-	CQMI01	73	2454	2138	3/23/15	4/11/17	Scaffold	SC	SAMEA1690341	GCA_001157345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/345/GCA_001157345.1_8727_8_48	-	GCGS144
Enterococcus faecium	1352	PRJNA353757	353757	Terrabacteria group	Firmicutes	2.9487	37.9	-	MPZY01	196	3095	2877	1/17/17	3/28/17	Contig	EvoTAR	SAMN06019999	GCA_001953395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/395/GCA_001953395.1_ASM195339v1	-	E2
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.73444	67.6	-	CSSU01	843	3780	3051	3/23/15	3/26/17	Scaffold	SC	SAMEA751129	GCA_001200475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/475/GCA_001200475.1_5515_7_11	-	B005
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66021	31.4	-	FBBD01	21	1719	1627	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683098	GCA_001492095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/095/GCA_001492095.1_EC3348	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.86863	55.4	-	FKDA01	43	4748	4531	4/6/16	3/28/17	Scaffold	SC	SAMEA2273470	GCA_900076795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/795/GCA_900076795.1_12045_5_50	-	e2770
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.3064	64.1	-	FSJR01	25	5356	5216	12/14/16	3/22/17	Contig	SC	SAMEA2070823	GCA_900136895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/895/GCA_900136895.1_10625_5_59	-	144
Pseudomonas sp. NFACC15-1	1566243	PRJEB16199	348921	Proteobacteria	Gammaproteobacteria	6.766	61.3	-	FMXJ01	82	6021	5815	10/20/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159443	GCA_900103555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/555/GCA_900103555.1_IMG-taxon_2599185212_annotated_assembly	-	NFACC15-1
Streptomyces sp. SceaMP-e96	1100824	PRJEB14428	325905	Terrabacteria group	Actinobacteria	9.56345	70.8	-	FMHL01	106	8305	7709	8/17/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02746030	GCA_900090095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/090/095/GCA_900090095.1_IMG-taxon_2513237115_annotated_assembly	-	SceaMP-e96
Streptomyces sp. AmelKG-A3	1115567	PRJEB14430	325915	Terrabacteria group	Actinobacteria	7.13511	72.2	-	FMYR01	45	6239	5880	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487747	GCA_900090115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/090/115/GCA_900090115.1_IMG-taxon_2518645584_annotated_assembly	-	AmelKG-A3
Pseudomonas sp. NFACC51	1566220	PRJEB16176	348943	Proteobacteria	Gammaproteobacteria	6.77876	60.7	-	FMXH01	34	6120	5925	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159429	GCA_900103575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/575/GCA_900103575.1_IMG-taxon_2599185289_annotated_assembly	-	NFACC51
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.12485	64.2	-	FSJS01	33	5120	4975	12/14/16	3/21/17	Contig	SC	SAMEA2154288	GCA_900136945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/945/GCA_900136945.1_10665_2_78	-	548
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.76128	55.5	-	FKBW01	35	4655	4429	4/6/16	3/28/17	Scaffold	SC	SAMEA2273139	GCA_900076805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/805/GCA_900076805.1_12045_4_18	-	e282
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.91169	30.9	-	FBHA01	84	1988	1856	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683247	GCA_001492115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/115/GCA_001492115.1_SWAN308	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.78791	67.7	-	CSRR01	565	3778	3175	3/23/15	3/26/17	Scaffold	SC	SAMEA751142	GCA_001200675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/675/GCA_001200675.1_5515_5_8	-	B115
Enterococcus faecium	1352	PRJNA353757	353757	Terrabacteria group	Firmicutes	3.01722	37.7	-	MPZZ01	202	3168	2939	1/17/17	3/28/17	Contig	EvoTAR	SAMN06020000	GCA_001953435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/435/GCA_001953435.1_ASM195343v1	-	E3
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14689	52.4	-	CQIU01	77	2524	2187	3/23/15	4/10/17	Scaffold	SC	SAMEA1690452	GCA_001158065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/065/GCA_001158065.1_8727_8_38	-	GCGS134
Enterococcus faecalis	1351	PRJDB4833	321159	Terrabacteria group	Firmicutes	3.13409	37.4	-	BDEN01	4	3235	3060	5/27/16	3/28/17	Contig	Korea Basic Science Institute	SAMD00051619	GCA_001662265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/662/265/GCA_001662265.1_ASM166226v1	-	CBA7120
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.28719	57.5	-	LEWX01	13	5216	4967	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280288	GCA_001031895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/895/GCA_001031895.1_Kleb_pneu_CHS146_V1	-	CHS146
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.09683	45.3	-	LRFM01	28	4930	4699	4/4/16	3/19/17	Contig	Health Canada	SAMN04422011	GCA_001608655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/655/GCA_001608655.1_ASM160865v1	-	A0EZ608
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.67072	29.7	-	MOTH01	905	4073	3876	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710904	GCA_002303525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/525/GCA_002303525.1_ASM230352v1	-	6621-NonSp/ST10
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.19564	47.6	-	MWFT01	101	4063	3893	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263900	GCA_002097915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/915/GCA_002097915.1_ASM209791v1	28219321	CISM_769845.7
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.12367	68.1	-	LXAV01	337	7437	6755	1/31/17	4/29/17	Contig	Northern Arizona University	SAMN04208720	GCA_001979415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/415/GCA_001979415.1_ASM197941v1	-	MSHR1879
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.80236	50.5	-	CWUA01	429	5622	4605	7/16/15	2/24/17	Scaffold	SC	SAMEA3345109	GCA_001252735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/735/GCA_001252735.1_H14128036301	-	36301B_1
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54054	38.3	-	FJKW01	60	3239	3087	2/20/16	3/27/17	Contig	SC	SAMEA2077800	GCA_900063125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/125/GCA_900063125.1_10625_3_46	-	2532STDY5467615
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05881	41.1	-	FIMO01	36	2075	1964	2/10/16	3/19/17	Contig	SC	SAMEA1566112	GCA_900050445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/445/GCA_900050445.1_8337_6_11	-	BM224C
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.05218	35.3	-	LBKC01	23	2131	2023	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435029	GCA_001017845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/845/GCA_001017845.1_ASM101784v1	25946017	DK-PW-070
Acinetobacter baumannii UH3807	1398970	PRJNA218771	218771	Proteobacteria	Gammaproteobacteria	3.7902	39	-	AYFR01	112	3639	3511	1/10/14	3/15/17	Contig	J. Craig Venter Institute	SAMN02597396	GCA_000517505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/505/GCA_000517505.1_gabuh3807_v01	24449752	UH3807
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.36416	66.4	-	JTVO01	90	6045	5854	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105521	GCA_000795225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/225/GCA_000795225.1_AZPAE14820	25367914	AZPAE14820
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05554	52.1	-	CMYX01	175	2335	2063	3/23/15	3/21/17	Scaffold	SC	SAMEA1031652	GCA_001117425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/425/GCA_001117425.1_6714_3_20	-	NM2381
Helicobacter pylori SA165C	1345571	PRJEB4082	216040	Proteobacteria	delta/epsilon subdivisions	1.63159	38.8	-	CBQJ01	81	1614	1413	9/21/13	3/24/17	Contig	MHH	SAMEA2272473	GCA_000477075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/075/GCA_000477075.1_SA165C	23898187	SA165C
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09638	39.7	-	CKDC01	62	2261	2018	3/21/15	3/11/17	Contig	SC	SAMEA1023686	GCA_001091905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/905/GCA_001091905.1_6593_5_16	-	type strain: N
Escherichia coli	562	PRJNA308786	308786	Proteobacteria	Gammaproteobacteria	5.01969	50.7	chromosome PPECC42:NZ_CM003707.1/CM003707.1	LRGE01	1	10126	9555	1/27/16	2/25/17	Chromosome	Huazhong Agricultural University	SAMN04017854	GCA_001542545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/545/GCA_001542545.1_ASM154254v1	25243151	PPECC42
Mycobacterium tuberculosis TKK_05MA_2008	1448523	PRJNA235528	235528	Terrabacteria group	Actinobacteria	4.40651	65.6	-	JJWE01	1	4278	4112	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586018	GCA_000653335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/335/GCA_000653335.1_Myco_tube_TKK_05MA_2008_V1	-	TKK_05MA_2008
Bacillus cereus	1396	PRJEB14962	336312	Terrabacteria group	Firmicutes	5.65634	35	-	FMJK01	83	5990	5617	9/10/16	6/16/17	Scaffold	INRA-MIG	SAMEA4361356	GCA_900094865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/865/GCA_900094865.1_ASM90009486v1	-	NVH_141/1-01_V_C53
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	2.98635	37.8	-	JPCR01	16	3070	2975	7/15/14	2/26/17	Contig	Cornell University	SAMN02741644	GCA_000729565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/565/GCA_000729565.1_ASM72956v1	-	FSL V1-0009
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.72033	30.3	-	CUQV01	28	1820	1721	3/31/15	3/18/17	Contig	SC	SAMEA1010573	GCA_001233085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/085/GCA_001233085.1_7092_1_53	-	OXC6500
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120774	1412612	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007404.2/CP007404.2	-	1	4710	4449	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384333	GCA_000625035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/035/GCA_000625035.2_ASM62503v2	24786953	EC20120774
Staphylococcus aureus M1228	1303785	PRJNA192846	192846	Terrabacteria group	Firmicutes	2.83602	32.9	-	AQGD01	3	2908	2726	4/8/13	3/3/17	Scaffold	Broad Institute	SAMN02596940	GCA_000364105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/105/GCA_000364105.1_Stap_aure_M1228_V1	-	M1228
Staphylococcus aureus M1407	1303786	PRJNA192847	192847	Terrabacteria group	Firmicutes	2.83541	32.9	-	AQGE01	3	2959	2795	4/8/13	3/3/17	Scaffold	Broad Institute	SAMN02596941	GCA_000364125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/125/GCA_000364125.1_Stap_aure_M1407_V1	-	M1407
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120775	1412533	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007405.2/CP007405.2	-	1	4708	4449	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384254	GCA_000625055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/055/GCA_000625055.2_ASM62505v2	24786953	EC20120775
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64979	30.5	-	CUUF01	10	1733	1622	3/31/15	3/18/17	Contig	SC	SAMEA1401046	GCA_001233105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/105/GCA_001233105.1_7213_3_49	-	OXC6592
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.02507	37.9	-	JPCV01	41	3076	2974	7/15/14	2/26/17	Contig	Cornell University	SAMN02741640	GCA_000729595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/595/GCA_000729595.1_ASM72959v1	-	FSL R8-9399
Bacillus cereus	1396	PRJEB14962	336312	Terrabacteria group	Firmicutes	5.4497	35.3	-	FMJG01	59	5814	5438	9/8/16	6/16/17	Scaffold	INRA-MIG	SAMEA4361420	GCA_900094905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/905/GCA_900094905.1_ASM90009490v1	-	F2404B-79
Mycobacterium tuberculosis TKK_05MA_2015	1448524	PRJNA235529	235529	Terrabacteria group	Actinobacteria	4.39492	65.6	-	JJWD01	70	4307	4109	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586019	GCA_000653355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/355/GCA_000653355.1_Myco_tube_TKK_05MA_2015_V1	-	TKK_05MA_2015
Escherichia coli	562	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.65505	50.4044	chromosome:NZ_CP014092.1/CP014092.1	-	19	6086	5467	2/17/16	3/5/17	Chromosome	US Food and Drug Administration 	SAMN03996336	GCA_001563715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/715/GCA_001563715.1_ASM156371v1	-	268-78-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05888	39.7	-	CNVP02	227	2225	2029	3/22/15	3/11/17	Contig	SC	SAMEA1032498	GCA_001091925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/925/GCA_001091925.2_6999_7_23	-	416185
Helicobacter pylori SA221A	1345508	PRJEB4112	215907	Proteobacteria	delta/epsilon subdivisions	1.62443	38.9	-	CBQA01	53	1596	1441	9/21/13	3/24/17	Contig	MHH	SAMEA2272364	GCA_000477095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/095/GCA_000477095.1_SA221A	23898187	SA221A
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.07357	52.1	-	CMZJ01	150	2330	2060	3/23/15	3/21/17	Scaffold	SC	SAMEA1031663	GCA_001120145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/145/GCA_001120145.1_6714_4_11	-	NM2701
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.81151	66.1	-	JTVN01	79	6556	6352	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105522	GCA_000795235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/235/GCA_000795235.1_AZPAE14821	25367914	AZPAE14821
Acinetobacter baumannii 1247182	1310597	PRJNA194673	194673	Proteobacteria	Gammaproteobacteria	3.99175	39	-	JEZF01	89	3901	3645	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02371034	GCA_000580135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/135/GCA_000580135.1_ASM58013v1	-	1247182
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.11573	35.6	-	LBKB01	41	2175	2037	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435028	GCA_001017855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/855/GCA_001017855.1_ASM101785v1	25946017	DK-PW-066
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04317	41.2	-	FIOQ01	25	2051	1938	2/10/16	3/19/17	Contig	SC	SAMEA1566173	GCA_900050455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/455/GCA_900050455.1_8337_6_66	-	EN264
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54002	38.3	-	FJKZ01	60	3237	3089	2/20/16	3/27/17	Contig	SC	SAMEA2077758	GCA_900063135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/135/GCA_900063135.1_10625_3_18	-	2532STDY5467587
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.73829	50.6	-	CWWW01	445	5537	4474	7/16/15	2/24/17	Scaffold	SC	SAMEA2434368	GCA_001252755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/755/GCA_001252755.1_12830_1_41	-	KY 1071
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.10684	68.2	-	LXAY01	413	7505	6774	1/31/17	4/29/17	Contig	Northern Arizona University	SAMN04208723	GCA_001979435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/435/GCA_001979435.1_ASM197943v1	-	GU-1909A
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.0371	47.5	-	MWFW01	95	3848	3692	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263897	GCA_002097925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/925/GCA_002097925.1_ASM209792v1	28219321	CISM_655665.0
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.22478	28.7	-	MOTI01	359	3925	3714	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710905	GCA_002303545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/545/GCA_002303545.1_ASM230354v1	-	6622-CF/ST37
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.10308	45.3	-	LRFQ01	31	4939	4706	4/4/16	3/19/17	Contig	Health Canada	SAMN04422017	GCA_001608675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/675/GCA_001608675.1_ASM160867v1	-	A2EZ715
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.87225	56.9	-	LEWY01	9	5919	5650	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280289	GCA_001031905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/905/GCA_001031905.1_Kleb_pneu_CHS147_V1	-	CHS147
Enterococcus faecalis	1351	PRJNA322048	322048	Terrabacteria group	Firmicutes	2.86131	37.6	-	LYBN01	73	2873	2726	7/22/16	3/28/17	Contig	UC Davis	SAMN05011678	GCA_001692955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/955/GCA_001692955.1_ASM169295v1	-	UCD-PD3
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14733	52.4	-	CQOO01	74	2510	2179	3/22/15	4/11/17	Scaffold	SC	SAMEA1690394	GCA_001158945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/945/GCA_001158945.1_8289_2_1	-	GCGS001
Enterococcus faecium	1352	PRJNA353757	353757	Terrabacteria group	Firmicutes	2.94419	37.9	-	MQAA01	191	3082	2863	1/17/17	3/28/17	Contig	EvoTAR	SAMN06020001	GCA_001953445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/445/GCA_001953445.1_ASM195344v1	-	E4
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.8007	67.9	-	CSRS01	422	3725	3233	3/23/15	3/26/17	Scaffold	SC	SAMEA751467	GCA_001200735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/735/GCA_001200735.1_5476_8_8	-	B283
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.57393	31.7	-	FBNT01	25	1579	1522	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683416	GCA_001492135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/135/GCA_001492135.1_H083420701	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.7672	55.4	-	FKBX01	30	4727	4493	4/6/16	3/28/17	Scaffold	SC	SAMEA2273140	GCA_900076815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/815/GCA_900076815.1_12045_4_19	-	e283
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16798	64.1	-	FVPY01	14	5196	5095	3/10/17	3/18/17	Contig	SC	SAMEA2071626	GCA_900137925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/925/GCA_900137925.1_10208_3_83	-	508
Pseudomonas sp. NFPP33	1566230	PRJEB16205	348953	Proteobacteria	Gammaproteobacteria	5.27534	62.6	-	FMXG01	16	4891	4779	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159475	GCA_900103725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/725/GCA_900103725.1_IMG-taxon_2600255389_annotated_assembly	-	NFPP33
Streptomyces sp. WMMB 714	1286822	PRJEB14436	325910	Terrabacteria group	Actinobacteria	6.59492	71.7	-	FMHJ01	34	5623	5400	8/17/16	3/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745759	GCA_900090125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/090/125/GCA_900090125.1_IMG-taxon_2522125136_annotated_assembly	-	WMMB 714
Streptomyces sp. LaPpAH-199	1265493	PRJEB14433	325911	Terrabacteria group	Actinobacteria	8.0442	72.6	-	FMYS01	41	6961	6633	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487750	GCA_900090135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/090/135/GCA_900090135.1_IMG-taxon_2518645622_annotated_assembly	-	LaPpAH-199
Pseudomonas sp. NFACC17-2	1566192	PRJEB16265	348871	Proteobacteria	Gammaproteobacteria	6.62155	60.6	-	FMYA01	123	6006	5730	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159386	GCA_900104075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/075/GCA_900104075.1_IMG-taxon_2599185308_annotated_assembly	-	NFACC17-2
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.33633	64.1	-	FSLR01	95	5390	5195	12/14/16	3/21/17	Contig	SC	SAMEA2147654	GCA_900137955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/955/GCA_900137955.1_10665_2_79	-	549
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.88818	55.5	-	FKIR01	25	4747	4538	4/11/16	3/28/17	Scaffold	SC	SAMEA2273505	GCA_900076825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/825/GCA_900076825.1_12082_4_64	-	e2793
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.6377	31.4	-	FBHT01	13	1690	1600	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683267	GCA_001492175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/175/GCA_001492175.1_CCN177	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.70913	67.5	-	CSMV01	724	3742	3005	3/23/15	3/26/17	Scaffold	SC	SAMEA1986111	GCA_001201155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/155/GCA_001201155.1_5463_6_11	-	B009
Enterococcus faecium	1352	PRJNA353757	353757	Terrabacteria group	Firmicutes	2.97073	37.7	-	MQAC01	236	3090	2880	1/17/17	3/28/17	Contig	EvoTAR	SAMN06020035	GCA_001953455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/455/GCA_001953455.1_ASM195345v1	-	E6
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14844	52.4	-	CQHO01	76	2527	2196	3/23/15	4/10/17	Scaffold	SC	SAMEA1690436	GCA_001160265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/265/GCA_001160265.1_8289_2_61	-	GCGS061
Enterococcus faecalis	1351	PRJNA313312	313312	Terrabacteria group	Firmicutes	2.96988	37.3	-	MIQF01	79	3029	2880	10/11/16	3/28/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN04518066	GCA_001766735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/735/GCA_001766735.1_ASM176673v1	-	CG_E
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.86656	56.9	-	LEWZ01	7	5917	5639	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280290	GCA_001031945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/945/GCA_001031945.1_Kleb_pneu_CHS148_V1	-	CHS148
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.13495	45.3	-	LRFU01	34	4965	4734	4/4/16	3/19/17	Contig	Health Canada	SAMN04422051	GCA_001608685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/685/GCA_001608685.1_ASM160868v1	-	F4395
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.3391	29.1	-	MOTJ01	271	4089	3884	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710906	GCA_002303575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/575/GCA_002303575.1_ASM230357v1	-	6623-NonSp/ST54
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.06132	47.4	-	MWFY01	151	3859	3699	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263895	GCA_002097975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/975/GCA_002097975.1_ASM209797v1	28219321	CISM_655630.3
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.1591	68.2	-	LXAX01	265	7465	6864	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208722	GCA_001979455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/455/GCA_001979455.1_ASM197945v1	-	GU-2143A
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.66452	50.7	-	CXGJ01	400	5111	4494	7/17/15	2/24/17	Scaffold	SC	SAMEA1013658	GCA_001252795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/795/GCA_001252795.1_6551_1_9	-	SS128716_2798531
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54063	38.3	-	FJKX01	61	3238	3089	2/20/16	3/27/17	Contig	SC	SAMEA2077799	GCA_900063145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/145/GCA_900063145.1_10625_3_43	-	2532STDY5467612
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.07655	41.1	-	FIFV01	33	2069	1976	2/10/16	3/19/17	Contig	SC	SAMEA1316614	GCA_900050785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/785/GCA_900050785.1_7114_5_22	-	LSS22
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.18555	35.4	-	LBKF01	33	2278	2159	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03434993	GCA_001017925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/925/GCA_001017925.1_ASM101792v1	25946017	DK-B-USS-032
Acinetobacter baumannii 1075025	1310596	PRJNA194672	194672	Proteobacteria	Gammaproteobacteria	3.92448	39	-	JEZD01	159	3824	3562	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02371032	GCA_000580155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/155/GCA_000580155.1_ASM58015v1	-	1075025
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.66803	66.1	-	JTVM01	100	6402	6179	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105523	GCA_000795265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/265/GCA_000795265.1_AZPAE14822	25367914	AZPAE14822
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05325	52.1	-	CMYS01	153	2314	2051	3/22/15	3/21/17	Scaffold	SC	SAMEA1031671	GCA_001120865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/865/GCA_001120865.1_6714_3_18	-	NM2335
Helicobacter pylori SA164A	1345568	PRJEB4079	216037	Proteobacteria	delta/epsilon subdivisions	1.61675	38.8	-	CBQK01	36	1588	1339	9/21/13	8/8/17	Contig	MHH	SAMEA2272266	GCA_000477115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/115/GCA_000477115.1_SA164A	23898187	SA164A
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.16297	39.5	-	CKIH01	72	2397	2163	3/21/15	3/11/17	Contig	SC	SAMEA1024156	GCA_001091945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/945/GCA_001091945.1_6631_3_23	-	19B
Escherichia coli	562	PRJEB51	171230	Proteobacteria	Gammaproteobacteria	4.75415	50.7	-	CAJT01	1	4945	4516	8/1/12	2/22/17	Scaffold	WTSI	SAMEA2272029	GCA_000308975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/975/GCA_000308975.2_ASM30897v2	-	IMT2125
Mycobacterium tuberculosis TKK_05SA_0010	1448526	PRJNA235531	235531	Terrabacteria group	Actinobacteria	4.44765	65.6	-	JJWC01	75	4357	4128	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586021	GCA_000653375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/375/GCA_000653375.1_Myco_tube_TKK_05SA_0010_V1	-	TKK_05SA_0010
Bacillus cereus	1396	PRJEB14962	336312	Terrabacteria group	Firmicutes	6.00608	35.1	-	FMSK01	45	6422	5973	10/5/16	6/16/17	Scaffold	INRA-MIG	SAMEA4361359	GCA_900095125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/125/GCA_900095125.1_ASM90009512v1	-	RIVM_BC485
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.05889	37.8	-	JPCS01	53	3146	3043	7/15/14	2/26/17	Contig	Cornell University	SAMN02741643	GCA_000729625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/625/GCA_000729625.1_ASM72962v1	-	FSL T1-0946
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69336	30.2	-	CUNP01	17	1777	1652	3/31/15	3/18/17	Contig	SC	SAMEA1010551	GCA_001233185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/185/GCA_001233185.1_7065_7_64	-	OXC6412
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120776	1412532	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007406.2/CP007406.2	-	1	4703	4443	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384253	GCA_000625075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/075/GCA_000625075.2_ASM62507v2	24786953	EC20120776
Staphylococcus aureus M1466	1303787	PRJNA192848	192848	Terrabacteria group	Firmicutes	2.96736	32.9	-	AQGF01	20	3151	2980	4/8/13	3/2/17	Scaffold	Broad Institute	SAMN02596942	GCA_000364145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/145/GCA_000364145.1_Stap_aure_M1466_V1	-	M1466
Staphylococcus aureus LCT-SA67	1348335	PRJNA208974	208974	Terrabacteria group	Firmicutes	2.79212	32.9	-	ATKO01	5	2852	2687	7/23/13	3/2/17	Scaffold	GBI	SAMN02207969	GCA_000439835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/835/GCA_000439835.1_LCT-SA67	24558241	LCT-SA67
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120917	1412613	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007407.2/CP007407.2	-	1	4710	4450	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384334	GCA_000625095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/095/GCA_000625095.2_ASM62509v2	24786953	EC20120917
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.62349	30.5	-	CURZ01	16	1695	1590	3/31/15	3/18/17	Contig	SC	SAMEA1010272	GCA_001233225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/225/GCA_001233225.1_7092_1_81	-	OXC6528
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.06262	37.8	-	JPCT01	36	3124	3042	7/15/14	2/26/17	Contig	Cornell University	SAMN02741642	GCA_000729645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/645/GCA_000729645.1_ASM72964v1	-	FSL T1-0023
Bacillus cereus	1396	PRJEB14962	336312	Terrabacteria group	Firmicutes	5.76524	35	-	FMIJ01	39	6103	5678	8/25/16	6/16/17	Scaffold	INRA-MIG	SAMEA4361422	GCA_900095505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/505/GCA_900095505.1_ASM90009550v1	-	RIVM_BC120
Mycobacterium tuberculosis TKK_05SA_0012	1448528	PRJNA235533	235533	Terrabacteria group	Actinobacteria	4.41734	65.6	-	JJWA01	83	4335	4142	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586023	GCA_000653395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/395/GCA_000653395.1_Myco_tube_TKK_05SA_0012_V1	-	TKK_05SA_0012
Escherichia coli D9	556266	PRJNA32507	32507	Proteobacteria	Gammaproteobacteria	4.76434	50.6	-	ACDL01	31	4827	4569	2/18/09	2/22/17	Scaffold	Broad Institute	SAMN02463720	GCA_000158395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/395/GCA_000158395.1_ASM15839v1	-	D9
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12698	39.6	-	CODL02	201	2318	2100	3/22/15	3/11/17	Contig	SC	SAMEA1463024	GCA_001091985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/985/GCA_001091985.2_7622_4_18	-	LE4047
Helicobacter pylori SA251A	1345529	PRJEB4123	215924	Proteobacteria	delta/epsilon subdivisions	1.63558	38.6	-	CBQC01	35	1573	1409	9/21/13	3/24/17	Contig	MHH	SAMEA2272595	GCA_000477135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/135/GCA_000477135.1_SA251A	23898187	SA251A
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.1399	52	-	CMXZ01	163	2453	2104	3/23/15	3/21/17	Scaffold	SC	SAMEA1031737	GCA_001122225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/225/GCA_001122225.1_6714_2_13	-	NM1910
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.84915	66.1	-	JTVL01	93	6563	6351	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105524	GCA_000795285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/285/GCA_000795285.1_AZPAE14823	25367914	AZPAE14823
Acinetobacter baumannii 1051830	1310585	PRJNA194661	194661	Proteobacteria	Gammaproteobacteria	3.8922	38.9	-	JEZC01	88	3837	3436	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02371031	GCA_000580175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/175/GCA_000580175.1_ASM58017v1	-	1051830
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.03435	35.3	-	LBKG01	24	2089	1969	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03434994	GCA_001017935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/935/GCA_001017935.1_ASM101793v1	25946017	DK-B-USS-055
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.11691	41.1	-	FIFX01	51	2158	2016	2/10/16	3/19/17	Contig	SC	SAMEA1316643	GCA_900050795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/795/GCA_900050795.1_7114_5_24	-	LSS24
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.58176	38.2	-	FJAP01	43	3297	3139	2/20/16	3/27/17	Contig	SC	SAMEA2059984	GCA_900063785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/785/GCA_900063785.1_10771_1_42	-	2531STDY5467323
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.94336	50.5	-	CWXA01	475	5783	4732	7/16/15	2/24/17	Scaffold	SC	SAMEA2434379	GCA_001252815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/815/GCA_001252815.1_12844_1_52	-	20426787
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.27133	67.9	-	LXBA01	140	7558	6941	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208725	GCA_001979485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/485/GCA_001979485.1_ASM197948v1	-	MSHR0391
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.03468	47.5	-	MWFZ01	110	3818	3680	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263894	GCA_002097985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/985/GCA_002097985.1_ASM209798v1	28219321	CISM_511
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.2162	28.5	-	MOTK01	83	3914	3749	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710907	GCA_002303585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/585/GCA_002303585.1_ASM230358v1	-	6624-Y/ST13
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.12846	45.2	-	LRFT01	35	4968	4709	4/4/16	3/19/17	Contig	Health Canada	SAMN04422049	GCA_001608755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/755/GCA_001608755.1_ASM160875v1	-	A5Z1022
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.87096	56.9	-	LEXB01	7	5956	5680	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280292	GCA_001031955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/955/GCA_001031955.1_Kleb_pneu_CHS150_V1	-	CHS150
Enterococcus faecalis	1351	PRJNA342925	342925	Terrabacteria group	Firmicutes	3.02496	37.3	-	MJEK01	58	3118	2964	10/21/16	3/28/17	Contig	University of Malaya	SAMN05771042	GCA_001806515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/515/GCA_001806515.1_ASM180651v1	-	Enfs51
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.14361	52.4	-	CQMT01	70	2518	2184	3/23/15	4/10/17	Scaffold	SC	SAMEA1677398	GCA_001162065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/065/GCA_001162065.1_8727_5_67	-	GCGS217
Enterococcus faecium	1352	PRJNA353757	353757	Terrabacteria group	Firmicutes	3.08184	37.6	-	MQAB01	242	3239	2995	1/17/17	3/28/17	Contig	EvoTAR	SAMN06020034	GCA_001953465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/465/GCA_001953465.1_ASM195346v1	-	E5
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.786	67.8	-	CSMC01	592	3760	3209	3/23/15	3/26/17	Scaffold	SC	SAMEA751307	GCA_001201315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/315/GCA_001201315.1_5476_2_8	-	B264
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.6383	31.4	-	FAYK01	18	1696	1603	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683009	GCA_001492195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/195/GCA_001492195.1_H133020651a	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.7924	55.5	-	FKCK01	37	4709	4487	4/6/16	3/28/17	Scaffold	SC	SAMEA2273141	GCA_900076835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/835/GCA_900076835.1_12045_4_20	-	e287
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.22511	64.1	-	FSLS01	42	5257	5111	12/14/16	3/21/17	Contig	SC	SAMEA2160962	GCA_900138005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/005/GCA_900138005.1_10665_2_80	-	550
Pseudomonas sp. NFACC13-1	1566245	PRJEB16287	348848	Proteobacteria	Gammaproteobacteria	6.96159	61.2	-	FMXV01	75	6203	5973	10/20/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159290	GCA_900104425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/104/425/GCA_900104425.1_IMG-taxon_2599185318_annotated_assembly	-	NFACC13-1
Streptomyces sp. WMMB 322	1286821	PRJEB14435	325909	Terrabacteria group	Actinobacteria	6.59705	70.9	-	FMHI01	32	5668	5389	8/17/16	3/13/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745757	GCA_900090145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/090/145/GCA_900090145.1_IMG-taxon_2522125135_annotated_assembly	-	WMMB 322
Streptomyces sp. OspMP-M43	1839781	PRJEB14581	326621	Terrabacteria group	Actinobacteria	8.23668	72.1	-	FMCP01	1456	7574	6446	8/12/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04883176	GCA_900091905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/905/GCA_900091905.1_IMG-taxon_2657245728_annotated_assembly	-	OspMP-M43
Pseudomonas sp. NFACC08-1	1566238	PRJEB16584	349876	Proteobacteria	Gammaproteobacteria	6.69682	60.6	-	FNNL01	34	6058	5844	10/22/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159474	GCA_900106735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/735/GCA_900106735.1_IMG-taxon_2599185248_annotated_assembly	-	NFACC08-1
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16251	64.1	-	FVQL01	5	5257	5091	3/10/17	3/18/17	Contig	SC	SAMEA2275630	GCA_900138135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/135/GCA_900138135.1_12078_1_65	-	1168
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.68078	55.6	-	FKDJ01	49	4539	4316	4/6/16	3/28/17	Scaffold	SC	SAMEA2273143	GCA_900076845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/845/GCA_900076845.1_12082_4_38	-	e289
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.74814	31.2	-	FBDO01	17	1845	1743	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683154	GCA_001492215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/215/GCA_001492215.1_EC5183	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.65535	67.5	-	CSSG01	1248	3736	2876	3/23/15	3/26/17	Scaffold	SC	SAMEA751435	GCA_001201375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/375/GCA_001201375.1_5476_8_4	-	B279
Enterococcus faecium	1352	PRJNA292799	292799	Terrabacteria group	Firmicutes	3.08995	37.874	plasmid pISMMS_VRE6_1:NZ_CM007639.1/CM007639.1; plasmid pISMMS_VRE6_2:NZ_CM007640.1/CM007640.1	LIVR01	7	3191	2941	1/18/17	3/28/17	Contig	Mount Sinai School of Medicine	SAMN03988561	GCA_001953715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/715/GCA_001953715.1_ASM195371v1	-	ISMMS_VRE_6
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14914	52.4	-	CQNO01	78	2518	2198	3/23/15	4/11/17	Scaffold	SC	SAMEA1690405	GCA_001165585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/585/GCA_001165585.1_8727_8_51	-	GCGS147
Enterococcus faecalis	1351	PRJNA335587	335587	Terrabacteria group	Firmicutes	2.98306	37.3	-	MCFW01	2	3031	2859	11/14/16	8/17/17	Contig	Massachusetts Institute of Technology	SAMN05449134	GCA_001878755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/755/GCA_001878755.1_ASM187875v1	28081148	ST4:13
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.68018	57.1	-	LEXA01	4	5741	5494	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280291	GCA_001031965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/965/GCA_001031965.1_Kleb_pneu_CHS149_V1	-	CHS149
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.06327	45.2	-	LRFR01	34	4871	4604	4/4/16	3/19/17	Contig	Health Canada	SAMN04422023	GCA_001608765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/765/GCA_001608765.1_ASM160876v1	-	A2EZ743
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.19892	28.8	-	MPJR01	361	3938	3729	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710908	GCA_002303605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/605/GCA_002303605.1_ASM230360v1	-	6625-Y/ST2
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.16772	47.6	-	MWFX01	125	4032	3854	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263896	GCA_002097995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/995/GCA_002097995.1_ASM209799v1	28219321	CISM_655664.3
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.27848	67.9	-	LXAZ01	150	7573	6947	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208724	GCA_001979495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/495/GCA_001979495.1_ASM197949v1	-	MSHR0376
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.84906	50.5	-	CXFD01	427	5367	4649	7/16/15	2/24/17	Scaffold	SC	SAMEA954727	GCA_001252835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/835/GCA_001252835.1_6246_5_2	-	SS132330_2496119
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.54577	38.3	-	FJAD01	38	3259	3122	2/20/16	3/27/17	Contig	SC	SAMEA1971749	GCA_900063795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/795/GCA_900063795.1_10771_1_32	-	2531STDY5467313
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.3417	41.3	-	FIHM01	128	2361	2165	2/10/16	3/19/17	Contig	SC	SAMEA1316668	GCA_900050805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/805/GCA_900050805.1_7114_5_64	-	LSS64
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.22173	35.7	-	LBKH01	122	2371	2060	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03434997	GCA_001017975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/975/GCA_001017975.1_ASM101797v1	25946017	DK-B-USS-147
Acinetobacter baumannii 1046051	1310570	PRJNA194646	194646	Proteobacteria	Gammaproteobacteria	4.12403	39.1	-	JEYZ01	204	4151	3853	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02371028	GCA_000580195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/195/GCA_000580195.1_ASM58019v1	-	1046051
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.03455	65.9	-	JTVK01	143	6845	6569	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105525	GCA_000795305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/305/GCA_000795305.1_AZPAE14824	25367914	AZPAE14824
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.07799	52	-	CMXI01	151	2351	2076	3/22/15	3/21/17	Scaffold	SC	SAMEA1031644	GCA_001124185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/185/GCA_001124185.1_6714_1_19	-	NM1666
Helicobacter pylori SA170C	1345578	PRJEB4089	216046	Proteobacteria	delta/epsilon subdivisions	1.61187	39.2	-	CBQL01	53	1600	1430	9/21/13	3/24/17	Contig	MHH	SAMEA2272099	GCA_000477155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/155/GCA_000477155.1_SA170C	23898187	SA170C
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.06768	39.6	-	CLKK01	70	2257	2045	3/21/15	3/11/17	Contig	SC	SAMEA1029179	GCA_001092085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/085/GCA_001092085.1_6938_3_27	-	SMRU3152
Escherichia coli 83972	525281	PRJNA31467	31467	Proteobacteria	Gammaproteobacteria	5.10616	50.5	-	ACGN01	105	5232	4884	2/18/09	2/22/17	Scaffold	Baylor College of Medicine	SAMN00001495	GCA_000159295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/295/GCA_000159295.1_ASM15929v1	-	83972
Mycobacterium tuberculosis TKK_05SA_0014	1448529	PRJNA235534	235534	Terrabacteria group	Actinobacteria	4.36365	65.6	-	JJVZ01	74	4291	4095	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586024	GCA_000653415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/415/GCA_000653415.1_Myco_tube_TKK_05SA_0014_V1	-	TKK_05SA_0014
Bacillus cereus	1396	PRJEB15728	347697	Terrabacteria group	Firmicutes	5.79678	35	-	FMZR01	54	6196	5832	10/20/16	3/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487767	GCA_900101305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/305/GCA_900101305.1_IMG-taxon_2606217805_annotated_assembly	-	KPR-7A
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	2.89864	38	-	JPCQ01	456	3112	2769	7/15/14	2/26/17	Contig	Cornell University	SAMN02741645	GCA_000729665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/665/GCA_000729665.1_ASM72966v1	-	FSL V1-0117
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69586	30.3	-	CUIY01	11	1789	1659	3/31/15	3/18/17	Contig	SC	SAMEA1010505	GCA_001233245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/245/GCA_001233245.1_7038_3_40	-	OXC6290
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120918	1412614	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007408.2/CP007408.2	-	1	4711	4452	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384335	GCA_000625115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/115/GCA_000625115.2_ASM62511v2	24786953	EC20120918
Staphylococcus aureus subsp. aureus PSP1996	1169408	PRJNA124067	124067	Terrabacteria group	Firmicutes	2.94551	33	-	ANHU01	27	3050	2871	11/4/13	3/2/17	Scaffold	Oh no sequences! group at Era7 Bioinformatics	SAMN02469896	GCA_000496095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/095/GCA_000496095.1_PSP1996-4.0	-	PSP1996
Staphylococcus aureus subsp. aureus KPL1845	1203553	PRJNA169473	169473	Terrabacteria group	Firmicutes	2.78352	32.8	-	AZJA01	12	2878	2686	12/10/13	3/3/17	Scaffold	Broad Institute	SAMN00862107	GCA_000507705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/507/705/GCA_000507705.1_Stap_aure_KPL1845_V1	-	KPL1845
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120925	1412615	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007375.2/CP007375.2	-	1	4711	4453	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384336	GCA_000625135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/135/GCA_000625135.2_ASM62513v2	24786953	EC20120925
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.68947	30.4	-	CUIE01	19	1768	1663	3/31/15	3/18/17	Contig	SC	SAMEA1010271	GCA_001233285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/285/GCA_001233285.1_7038_3_23	-	OXC6272
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09234	37.9	-	JOKS01	17	3131	3043	7/15/14	2/26/17	Contig	Cornell University	SAMN02741455	GCA_000729685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/685/GCA_000729685.1_ASM72968v1	-	FSL F6-0311
Bacillus cereus	1396	PRJEB18850	360728	Terrabacteria group	Firmicutes	5.25921	35.3	-	FTLZ01	18	5634	5322	1/14/17	3/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05878494	GCA_900155895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/895/GCA_900155895.1_IMG-taxon_2710264774_annotated_assembly	-	RU36C
Mycobacterium tuberculosis TKK_05SA_0016	1448530	PRJNA235535	235535	Terrabacteria group	Actinobacteria	4.40861	65.6	-	JJVY01	77	4333	4136	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586025	GCA_000653435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/435/GCA_000653435.1_Myco_tube_TKK_05SA_0016_V1	-	TKK_05SA_0016
Escherichia coli B088	550672	PRJNA38905	38905	Proteobacteria	Gammaproteobacteria	4.99348	50.5	-	ACXE01	37	5157	4833	3/16/10	2/22/17	Scaffold	Broad Institute	SAMN02595356	GCA_000163155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/155/GCA_000163155.1_ASM16315v1	-	B088
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09083	39.6	-	CNWW02	174	2222	1991	3/22/15	3/15/17	Contig	SC	SAMEA1032689	GCA_001092165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/165/GCA_001092165.2_7001_2_4	-	R34-3108
Helicobacter pylori SA146A	1345546	PRJEB4061	216014	Proteobacteria	delta/epsilon subdivisions	1.67345	38.9	-	CBPZ01	45	1633	1458	9/21/13	3/24/17	Contig	MHH	SAMEA2272477	GCA_000477175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/175/GCA_000477175.1_SA146A	23898187	SA146A
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.06581	52	-	CMXS01	146	2326	2060	3/22/15	3/21/17	Scaffold	SC	SAMEA1031687	GCA_001127705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/705/GCA_001127705.1_6714_1_7	-	NM1363
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.42619	66.4	-	JTVJ01	68	6037	5800	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105526	GCA_000795325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/325/GCA_000795325.1_AZPAE14825	25367914	AZPAE14825
Acinetobacter baumannii 1043903	1310569	PRJNA194645	194645	Proteobacteria	Gammaproteobacteria	4.16026	38.9	-	JEYY01	252	4252	3945	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02371027	GCA_000580215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/215/GCA_000580215.1_ASM58021v1	-	1043903
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.1814	35.6	-	LBKI01	73	2282	2051	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03434998	GCA_001017995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/995/GCA_001017995.1_ASM101799v1	25946017	DK-B-USS-155
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.12126	41.2	-	FIHN01	29	2063	1954	2/10/16	3/19/17	Contig	SC	SAMEA1316710	GCA_900050815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/815/GCA_900050815.1_7114_5_65	-	LSS65
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.36347	38.3	-	FJEU01	26	3085	2957	2/20/16	3/27/17	Contig	SC	SAMEA2065277	GCA_900063805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/805/GCA_900063805.1_10771_3_89	-	2531STDY5467466
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.72233	50.7	-	CXGC01	389	5172	4550	7/16/15	2/24/17	Scaffold	SC	SAMEA1013835	GCA_001252915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/915/GCA_001252915.1_6496_8_6	-	SS85261_2712855
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.83523	68.1	-	LXBC01	293	7107	6550	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208727	GCA_001979505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/505/GCA_001979505.1_ASM197950v1	-	MSHR1660
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.0388	47.5	-	MWGA01	98	3855	3688	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263893	GCA_002098005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/005/GCA_002098005.1_ASM209800v1	28219321	CISM_510
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.14762	28.6	-	MPJS01	157	3828	3676	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710909	GCA_002303635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/635/GCA_002303635.1_ASM230363v1	-	6626-Y/ST110
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.08944	45.3	-	LRFS01	45	4902	4694	4/4/16	3/19/17	Contig	Health Canada	SAMN04422047	GCA_001608785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/785/GCA_001608785.1_ASM160878v1	-	A3EZ136
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.53066	57.3	-	LEXC01	6	5592	5371	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280293	GCA_001031995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/031/995/GCA_001031995.1_Kleb_pneu_CHS151_V1	-	CHS151
Enterococcus faecalis	1351	PRJNA335587	335587	Terrabacteria group	Firmicutes	3.04449	37.3	-	MCFU01	3	3107	2925	11/14/16	3/28/17	Contig	Massachusetts Institute of Technology	SAMN05449122	GCA_001878765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/765/GCA_001878765.1_ASM187876v1	28081148	ST4:1
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.15454	52.4	-	CQHT01	83	2519	2192	3/23/15	4/10/17	Scaffold	SC	SAMEA1690375	GCA_001166745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/745/GCA_001166745.1_8289_2_21	-	GCGS021
Enterococcus faecium	1352	PRJNA312725	312725	Terrabacteria group	Firmicutes	3.01492	37.6	-	LTDQ01	212	3153	2968	1/23/17	3/28/17	Contig	University of Malaya	SAMN04500822	GCA_001969545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/545/GCA_001969545.1_ASM196954v1	-	VREr6
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.80971	67.9	-	CSOE01	288	3664	3291	3/23/15	3/26/17	Scaffold	SC	SAMEA751164	GCA_001201395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/395/GCA_001201395.1_5515_8_12	-	B076
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.84777	30.9	-	FBOT01	85	1953	1824	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683415	GCA_001492235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/235/GCA_001492235.1_H073900238	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.79297	55.5	-	FKCE01	32	4708	4486	4/6/16	3/28/17	Scaffold	SC	SAMEA2273142	GCA_900076855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/855/GCA_900076855.1_12045_4_21	-	e288
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16205	64.1	-	FVRV01	4	5256	5089	3/10/17	3/18/17	Contig	SC	SAMEA2376775	GCA_900138495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/495/GCA_900138495.1_12454_1_93	-	1178
Pseudomonas sp. NFACC14	1566244	PRJEB16592	349868	Proteobacteria	Gammaproteobacteria	6.76305	61.3	-	FNOA01	61	6012	5818	10/22/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159380	GCA_900106885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/106/885/GCA_900106885.1_IMG-taxon_2599185322_annotated_assembly	-	NFACC14
Streptomyces sp. MnatMP-M27	1839768	PRJEB14580	326622	Terrabacteria group	Actinobacteria	10.886	70.8	-	FMDJ01	1955	9860	8204	8/15/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04883145	GCA_900092015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/015/GCA_900092015.1_IMG-taxon_2657245727_annotated_assembly	-	MnatMP-M27
Streptomyces sp. 136MFCol5.1	1172182	PRJEB15794	347707	Terrabacteria group	Actinobacteria	7.83661	69.8	-	FMVI01	31	6965	6606	10/17/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745898	GCA_900101975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/101/975/GCA_900101975.1_IMG-taxon_2636416059_annotated_assembly	-	136MFCol5.1
Pseudomonas sp. NFIX28	1566235	PRJEB16614	349954	Proteobacteria	Gammaproteobacteria	6.73423	62.6	-	FNPW01	42	6139	5926	10/22/16	8/1/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159453	GCA_900107395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/107/395/GCA_900107395.1_IMG-taxon_2600254931_annotated_assembly	-	NFIX28
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.10971	64.1	-	FVSX01	15	5124	4971	3/10/17	3/18/17	Contig	SC	SAMEA2069138	GCA_900138735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/735/GCA_900138735.1_10208_3_16	-	441
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.85135	55.5	-	FKCL01	27	4697	4496	4/6/16	3/28/17	Scaffold	SC	SAMEA2273145	GCA_900076865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/865/GCA_900076865.1_12045_4_23	-	e294
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66491	31.3	-	FBFM01	18	1715	1633	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683204	GCA_001492255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/255/GCA_001492255.1_EC6122	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.73723	67.6	-	CSNF01	742	3755	3049	3/23/15	3/26/17	Scaffold	SC	SAMEA1931507	GCA_001201635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/635/GCA_001201635.1_5463_6_3	-	B019
Enterococcus faecium	1352	PRJNA312723	312723	Terrabacteria group	Firmicutes	2.86261	37.8	-	LTAA01	152	2921	2746	1/23/17	3/28/17	Contig	University of Malaya	SAMN04500812	GCA_001969615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/615/GCA_001969615.1_ASM196961v1	-	VRE2
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14934	52.4	-	CQKB01	68	2512	2194	3/23/15	4/10/17	Scaffold	SC	SAMEA1690410	GCA_001167585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/585/GCA_001167585.1_8727_8_43	-	GCGS139
Enterococcus faecalis	1351	PRJNA335587	335587	Terrabacteria group	Firmicutes	3.0157	37.4	-	MCFV01	3	3084	2904	11/14/16	8/17/17	Contig	Massachusetts Institute of Technology	SAMN05449127	GCA_001878785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/785/GCA_001878785.1_ASM187878v1	28081148	ST55:12
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.86616	56.9	-	LEXD01	14	5979	5674	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280294	GCA_001032025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/025/GCA_001032025.1_Kleb_pneu_CHS152_V1	-	CHS152
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.09045	45.2	-	LRFV01	30	4915	4694	4/4/16	3/19/17	Contig	Health Canada	SAMN04422052	GCA_001608815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/815/GCA_001608815.1_ASM160881v1	-	F30368
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.18248	28.6	-	MOTL01	151	3882	3724	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710910	GCA_002303655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/655/GCA_002303655.1_ASM230365v1	-	6627-AL/ST58
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.02992	47.5	-	MWGC01	118	3790	3684	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263891	GCA_002098055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/055/GCA_002098055.1_ASM209805v1	28219321	CISM_420
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.27517	67.9	-	LXBB01	143	7562	6952	1/31/17	4/29/17	Contig	Northern Arizona University	SAMN04208726	GCA_001979545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/545/GCA_001979545.1_ASM197954v1	-	MSHR0443
Shigella sonnei	624	PRJEB2460	204320	Proteobacteria	Gammaproteobacteria	4.66007	50.8	-	CXOG01	382	5080	4494	7/18/15	2/24/17	Scaffold	SC	SAMEA1027665	GCA_001252935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/935/GCA_001252935.1_6350_1_1	-	sh02-7265
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.36233	38.3	-	FJEW01	30	3084	2956	2/20/16	3/27/17	Contig	SC	SAMEA2065280	GCA_900063815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/815/GCA_900063815.1_10771_3_94	-	2531STDY5467471
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	1.97394	41.2	-	FIKQ01	26	1974	1883	2/10/16	3/19/17	Contig	SC	SAMEA1316551	GCA_900050825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/825/GCA_900050825.1_7054_7_49	-	SS1054
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.27556	35.5	-	LBKJ01	84	2390	2149	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03434999	GCA_001018005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/005/GCA_001018005.1_ASM101800v1	25946017	DK-B-USS-196
Acinetobacter baumannii 1042969-1265	1310574	PRJNA194650	194650	Proteobacteria	Gammaproteobacteria	4.0712	39.2	-	JEYW01	166	4044	3793	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02371025	GCA_000580235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/235/GCA_000580235.1_ASM58023v1	-	1042969-1265
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.10883	65.9	-	JTVI01	133	6953	6712	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105527	GCA_000795345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/345/GCA_000795345.1_AZPAE14826	25367914	AZPAE14826
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.0468	52.1	-	CMZB01	180	2285	2039	3/23/15	3/21/17	Scaffold	SC	SAMEA1031633	GCA_001127825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/825/GCA_001127825.1_6714_3_8	-	NM2228
Helicobacter pylori SA222A	1345510	PRJEB4114	215909	Proteobacteria	delta/epsilon subdivisions	1.65897	38.9	-	CBQE01	62	1645	1394	9/21/13	4/10/17	Contig	MHH	SAMEA2272455	GCA_000477195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/195/GCA_000477195.1_SA222A	23898187	SA222A
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12717	39.6	-	CLUW01	76	2327	2100	3/21/15	3/11/17	Contig	SC	SAMEA1025904	GCA_001092345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/345/GCA_001092345.1_6983_2_9	-	SMRU2217
Escherichia coli B185	550676	PRJNA38915	38915	Proteobacteria	Gammaproteobacteria	5.14431	50.6	-	ACXF01	44	5238	4890	3/16/10	2/22/17	Scaffold	Broad Institute	SAMN02595357	GCA_000163175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/175/GCA_000163175.1_ASM16317v1	-	B185
Mycobacterium tuberculosis TKK_05SA_0017	1448531	PRJNA235536	235536	Terrabacteria group	Actinobacteria	4.38744	65.6	-	JJVX01	78	4323	4108	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586026	GCA_000653455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/455/GCA_000653455.1_Myco_tube_TKK_05SA_0017_V1	-	TKK_05SA_0017
Bacillus cereus	1396	PRJEB20065	387332	Terrabacteria group	Firmicutes	5.67037	35.1	-	FWYX01	77	6083	5757	5/20/17	6/16/17	Scaffold	INSTITUT PASTEUR	SAMEA103956298	GCA_900176805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/805/GCA_900176805.1_Bcereus.16-00196	-	16-00196
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.06004	37.8	-	JOJS01	31	3124	3028	7/15/14	2/26/17	Contig	Cornell University	SAMN02741477	GCA_000729705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/729/705/GCA_000729705.1_ASM72970v1	-	FSL R8-5257
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.8668	30.1	-	CUMJ01	27	1987	1855	3/31/15	3/18/17	Contig	SC	SAMEA1010661	GCA_001233305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/305/GCA_001233305.1_7065_7_35	-	OXC6381
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120927	1412617	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007376.2/CP007376.2	-	1	4710	4451	4/2/14	3/2/17	Chromosome	LFZ	SAMN02384338	GCA_000625155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/155/GCA_000625155.2_ASM62515v2	24786953	EC20120927
Staphylococcus aureus subsp. aureus KPL1828	1203552	PRJNA169472	169472	Terrabacteria group	Firmicutes	2.71176	32.8	-	AZJB01	3	2779	2619	12/10/13	3/2/17	Scaffold	Broad Institute	SAMN00862121	GCA_000507725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/507/725/GCA_000507725.1_Stap_aure_KPL1828_V1	-	KPL1828
Staphylococcus aureus DAR948	1409744	PRJNA224162	224162	Terrabacteria group	Firmicutes	2.83088	32.9	-	JBSS01	14	2949	2770	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02383529	GCA_000525105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/105/GCA_000525105.1_Stap_aure_DAR948_V1	-	DAR948
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120963	1412531	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007377.2/CP007377.2	-	1	4711	4448	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384252	GCA_000625175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/175/GCA_000625175.2_ASM62517v2	24786953	EC20120963
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69744	30.3	-	CUNW01	12	1796	1674	3/31/15	3/18/17	Contig	SC	SAMEA1010639	GCA_001233325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/325/GCA_001233325.1_7065_7_70	-	OXC6418
Listeria monocytogenes	1639	PRJNA212117	212117	Terrabacteria group	Firmicutes	2.90321	38	-	JRFW01	1	2933	2833	9/10/14	2/26/17	Contig	"Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention"	SAMN02265443	GCA_000754025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/025/GCA_000754025.1_PDT000000023.1	-	PNUSAL000046
Bacillus cereus	1396	PRJEB20065	387332	Terrabacteria group	Firmicutes	5.39321	35.3	-	FWZC01	152	5976	5583	5/20/17	5/24/17	Scaffold	INSTITUT PASTEUR	SAMEA103956301	GCA_900176835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/835/GCA_900176835.1_Bcereus.16-00221	-	16-00221
Mycobacterium tuberculosis TKK_05SA_0018	1448532	PRJNA235537	235537	Terrabacteria group	Actinobacteria	4.4036	65.6	-	JJVW01	68	4300	4118	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586027	GCA_000653475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/475/GCA_000653475.1_Myco_tube_TKK_05SA_0018_V1	-	TKK_05SA_0018
Escherichia coli B354	550677	PRJNA38917	38917	Proteobacteria	Gammaproteobacteria	4.85378	50.5	-	ACXG01	22	4894	4628	3/16/10	2/22/17	Scaffold	Broad Institute	SAMN02595358	GCA_000163195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/195/GCA_000163195.1_ASM16319v1	-	B354
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.2508	39.5	-	CMNT01	103	2503	2245	3/23/15	3/11/17	Contig	SC	SAMEA2061475	GCA_001092365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/365/GCA_001092365.1_9803_7_13	-	6A
Helicobacter pylori SA164C	1345569	PRJEB4080	216039	Proteobacteria	delta/epsilon subdivisions	1.613	38.9	-	CBQM01	55	1584	1417	9/21/13	3/24/17	Contig	MHH	SAMEA2272457	GCA_000477215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/215/GCA_000477215.1_SA164C	23898187	SA164C
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.07518	52.1	-	CMZT01	197	2341	2079	3/23/15	3/21/17	Scaffold	SC	SAMEA1031706	GCA_001127965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/965/GCA_001127965.1_6714_4_20	-	NM2814
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.35411	65.6	-	JTVH01	126	7096	6856	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105528	GCA_000795365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/365/GCA_000795365.1_AZPAE14827	25367914	AZPAE14827
Acinetobacter baumannii 1040094	1310590	PRJNA194666	194666	Proteobacteria	Gammaproteobacteria	3.97516	39.1	-	JEYV01	67	3847	3610	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02371024	GCA_000580255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/255/GCA_000580255.1_ASM58025v1	-	1040094
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.29612	35.7	-	LBKK01	99	2444	2173	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435000	GCA_001018015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/015/GCA_001018015.1_ASM101801v1	25946017	DK-B-USS-204
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.11969	41	-	FIKT01	63	2131	1980	2/10/16	3/19/17	Contig	SC	SAMEA1316554	GCA_900050835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/835/GCA_900050835.1_7054_7_93	-	SS1062
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54019	38.3	-	FJJE01	61	3238	3091	2/20/16	3/27/17	Contig	SC	SAMEA2077781	GCA_900063835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/835/GCA_900063835.1_10625_2_79	-	2532STDY5467552
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.62935	50.8	-	CXIM01	379	5204	4448	7/16/15	2/24/17	Scaffold	SC	SAMEA2003383	GCA_001252955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/955/GCA_001252955.1_8289_7_72	-	85362
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.8456	68	-	LXBD01	103	7141	6580	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208728	GCA_001979565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/565/GCA_001979565.1_ASM197956v1	-	MSHR1670
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.03867	47.5	-	MWGB01	93	3863	3693	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263892	GCA_002098065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/065/GCA_002098065.1_ASM209806v1	28219321	CISM_505
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.196	28.6	-	MOTM01	162	3887	3730	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710911	GCA_002303675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/675/GCA_002303675.1_ASM230367v1	-	6628-AL/ST58
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.12149	45.3	-	LRFW01	47	4911	4702	4/4/16	3/19/17	Contig	Health Canada	SAMN04422055	GCA_001608835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/835/GCA_001608835.1_ASM160883v1	-	F63267
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.90644	56.9	-	LEXE01	7	6004	5710	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280295	GCA_001032035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/035/GCA_001032035.1_Kleb_pneu_CHS154_V1	-	CHS154
Enterococcus faecalis	1351	PRJNA358432	358432	Terrabacteria group	Firmicutes	2.83282	37.3	-	MSHQ02	29	2789	2693	1/4/17	4/5/17	Contig	California State University Fresno	SAMN06174079	GCA_001932015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/015/GCA_001932015.2_ASM193201v2	-	PM01
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14811	52.4	-	CQID01	77	2510	2187	3/22/15	4/11/17	Scaffold	SC	SAMEA1690459	GCA_001168105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/105/GCA_001168105.1_8289_2_89	-	GCGS089
Enterococcus faecium	1352	PRJNA312724	312724	Terrabacteria group	Firmicutes	2.89837	37.8	-	LTBJ01	174	2949	2768	1/23/17	3/28/17	Contig	University of Malaya	SAMN04500821	GCA_001969625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/625/GCA_001969625.1_ASM196962v1	-	VREr5
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.67884	67.5	-	CSSC01	1019	3739	2955	3/23/15	3/26/17	Scaffold	SC	SAMEA751429	GCA_001201995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/995/GCA_001201995.1_6062_3_5	-	B066
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.5176	32.1	-	FBNE01	149	1564	1454	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683411	GCA_001492275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/275/GCA_001492275.1_H091000385	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.58076	55.3	-	FKCY01	27	4464	4261	4/6/16	3/28/17	Scaffold	SC	SAMEA2273144	GCA_900076875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/875/GCA_900076875.1_12045_4_22	-	e292
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98577	64.2	-	FVSR01	30	5000	4865	3/10/17	3/18/17	Contig	SC	SAMEA2069145	GCA_900138745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/745/GCA_900138745.1_10208_3_37	-	462
Pseudomonas sp. NFR16	1566248	PRJEB16797	350907	Proteobacteria	Gammaproteobacteria	6.06157	60.2	-	FNYJ01	12	5464	5294	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159495	GCA_900108875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/875/GCA_900108875.1_IMG-taxon_2600255283_annotated_assembly	-	NFR16
Streptomyces sp. cf386	1761904	PRJEB16215	348994	Terrabacteria group	Actinobacteria	10.6229	70.5	-	FNHV01	56	9449	8937	10/20/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487981	GCA_900103585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/585/GCA_900103585.1_IMG-taxon_2615840541_annotated_assembly	-	CF386
Streptomyces sp. yr375	1761906	PRJEB16986	351117	Terrabacteria group	Actinobacteria	9.07048	71.2	-	FOFF01	122	7816	7260	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487983	GCA_900110755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/755/GCA_900110755.1_IMG-taxon_2615840635_annotated_assembly	-	YR375
Pseudomonas sp. NFACC07-1	1566239	PRJEB16787	350917	Proteobacteria	Gammaproteobacteria	6.7487	60.8	-	FNYG01	48	6107	5903	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159298	GCA_900109015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/015/GCA_900109015.1_IMG-taxon_2599185305_annotated_assembly	-	NFACC07-1
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98912	64.2	-	FVSN01	28	4961	4821	3/10/17	3/18/17	Contig	SC	SAMEA2070152	GCA_900138755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/755/GCA_900138755.1_10060_7_2	-	2
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.99711	55.4	-	FKCH01	38	4921	4689	4/6/16	3/28/17	Scaffold	SC	SAMEA2273475	GCA_900076885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/885/GCA_900076885.1_12082_4_56	-	e298
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.85405	31.2	-	FBQX01	2	1922	1802	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683221	GCA_001492295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/295/GCA_001492295.1_C8C3	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.79394	67.8	-	CSQY01	631	3795	3194	3/23/15	3/26/17	Scaffold	SC	SAMEA751126	GCA_001202375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/375/GCA_001202375.1_5515_7_7	-	B142
Enterococcus faecium	1352	PRJNA312726	312726	Terrabacteria group	Firmicutes	3.0212	37.6	-	LSZZ01	217	3148	2956	1/23/17	3/28/17	Contig	University of Malaya	SAMN04500826	GCA_001969645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/645/GCA_001969645.1_ASM196964v1	-	VREr7
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.18436	52.4	-	CQLI01	72	2582	2240	3/22/15	4/10/17	Scaffold	SC	SAMEA1690489	GCA_001168565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/565/GCA_001168565.1_8727_8_66	-	GCGS162
Enterococcus faecalis ATCC 29212	1201292	PRJNA341407	341407	Terrabacteria group	Firmicutes	3.01126	37.3	-	MTFY01	49	3088	2938	2/13/17	3/29/17	Contig	California Department of Public Health	SAMN05721774	GCA_001999625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/625/GCA_001999625.1_ASM199962v1	-	ATCC 29212
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.88688	56.9	-	LEXF01	11	5973	5700	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280296	GCA_001032045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/045/GCA_001032045.1_Kleb_pneu_CHS155_V1	-	CHS155
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.07671	45.3	-	LRGA01	34	4909	4670	4/4/16	3/19/17	Contig	Health Canada	SAMN04422093	GCA_001608865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/865/GCA_001608865.1_ASM160886v1	-	T8994
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.39101	29.3	-	MOTN01	157	4169	3952	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710912	GCA_002303695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/695/GCA_002303695.1_ASM230369v1	-	6629-NonSp/novelST
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.03615	47.5	-	MWGD01	83	3865	3690	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263890	GCA_002098075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/075/GCA_002098075.1_ASM209807v1	28219321	CISM_399
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.9623	68	-	LXBE01	274	7313	6646	1/31/17	4/29/17	Contig	Northern Arizona University	SAMN04208729	GCA_001979585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/585/GCA_001979585.1_ASM197958v1	-	MSHR1672
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.93676	50.4	-	CXLT01	453	5617	4750	7/16/15	2/24/17	Scaffold	SC	SAMEA1968925	GCA_001252975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/975/GCA_001252975.1_8290_5_15	-	36861682
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54151	38.3	-	FJKD01	64	3237	3089	2/20/16	3/27/17	Contig	SC	SAMEA2077976	GCA_900063845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/845/GCA_900063845.1_10625_3_36	-	2532STDY5467605
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.11198	41.1	-	FILU01	62	2148	2013	2/10/16	3/19/17	Contig	SC	SAMEA1316708	GCA_900050855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/855/GCA_900050855.1_7054_7_70	-	SS989
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.37862	35.7	-	LBKL01	105	2526	2278	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435001	GCA_001018055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/055/GCA_001018055.1_ASM101805v1	25946017	DK-B-USS-215
Acinetobacter baumannii 1036938	1310554	PRJNA194630	194630	Proteobacteria	Gammaproteobacteria	4.14444	39.1	-	JEYT01	236	4160	3894	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02371022	GCA_000580275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/275/GCA_000580275.1_ASM58027v1	-	1036938
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.87288	66.1	-	JTVG01	124	6648	6424	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105529	GCA_000795385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/385/GCA_000795385.1_AZPAE14828	25367914	AZPAE14828
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05614	52.1	-	CMYR01	149	2313	2060	3/23/15	3/21/17	Scaffold	SC	SAMEA1031658	GCA_001128105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/105/GCA_001128105.1_6714_2_9	-	NM1892
Helicobacter pylori SA160A	1345560	PRJEB4071	216029	Proteobacteria	delta/epsilon subdivisions	1.65885	38.5	-	CBQN01	50	1605	1456	9/21/13	3/24/17	Contig	MHH	SAMEA2271968	GCA_000477235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/235/GCA_000477235.1_SA160A	23898187	SA160A
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05385	39.6	-	COEL02	167	2239	2040	3/23/15	3/11/17	Contig	SC	SAMEA1463088	GCA_001092525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/525/GCA_001092525.2_7622_5_49	-	MD5031
Escherichia coli FVEC1302	656379	PRJNA39915	39915	Proteobacteria	Gammaproteobacteria	5.33964	50.6	-	ACXH01	50	5605	5109	3/16/10	2/22/17	Scaffold	Broad Institute	SAMN02595359	GCA_000163215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/215/GCA_000163215.1_ASM16321v1	-	FVEC1302
Mycobacterium tuberculosis TKK_05SA_0019	1448533	PRJNA235538	235538	Terrabacteria group	Actinobacteria	4.39192	65.6	-	JJVV01	80	4331	4117	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586028	GCA_000653495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/495/GCA_000653495.1_Myco_tube_TKK_05SA_0019_V1	-	TKK_05SA_0019
Bacillus cereus	1396	PRJEB20065	387332	Terrabacteria group	Firmicutes	5.83665	35.3	-	FWZD01	89	6212	5824	5/20/17	6/15/17	Scaffold	INSTITUT PASTEUR	SAMEA103956292	GCA_900176845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/845/GCA_900176845.1_Bcereus.16-00185	-	16-00185
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.09772	37.7	-	JPIW01	18	3202	3100	10/6/14	2/26/17	Contig	Cornell University	SAMN02741486	GCA_000764125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/125/GCA_000764125.1_ASM76412v1	-	FSL R8-5528
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.65143	30.3	-	CUTJ01	6	1745	1637	3/31/15	3/18/17	Contig	SC	SAMEA1401257	GCA_001233405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/405/GCA_001233405.1_7213_3_27	-	OXC6570
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120968	1412558	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68626	52.2	chromosome:NZ_CP007378.2/CP007378.2	-	1	4708	4447	4/2/14	3/2/17	Chromosome	LFZ	SAMN02384279	GCA_000625195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/195/GCA_000625195.2_ASM62519v2	24786953	EC20120968
Staphylococcus aureus DAR1199	1409745	PRJNA224163	224163	Terrabacteria group	Firmicutes	2.87451	32.8	-	JBST01	15	3022	2842	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02383530	GCA_000525125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/125/GCA_000525125.1_Stap_aure_DAR1199_V1	-	DAR1199
Staphylococcus aureus DAR1280	1409746	PRJNA224164	224164	Terrabacteria group	Firmicutes	2.90756	33	-	JBSU01	8	3056	2898	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02383531	GCA_000525145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/145/GCA_000525145.1_Stap_aure_DAR1280_V1	-	DAR1280
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120969	1412619	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68583	52.2	chromosome:NZ_CP007379.2/CP007379.2	-	1	4707	4448	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384340	GCA_000625215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/215/GCA_000625215.2_ASM62521v2	24786953	EC20120969
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.67684	30.3	-	CUTK01	21	1761	1668	3/31/15	3/18/17	Contig	SC	SAMEA1401241	GCA_001233465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/465/GCA_001233465.1_7213_3_28	-	OXC6571
Listeria monocytogenes	1639	PRJNA245909	245909	Terrabacteria group	Firmicutes	3.05524	37.8	-	JPIV01	30	3151	3049	10/6/14	2/26/17	Contig	Cornell University	SAMN02741613	GCA_000764145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/145/GCA_000764145.1_ASM76414v1	-	FSL R8-7653
Bacillus cereus	1396	PRJEB20065	387332	Terrabacteria group	Firmicutes	5.35797	35.3	-	FWZB01	63	5802	5458	5/20/17	6/16/17	Scaffold	INSTITUT PASTEUR	SAMEA103956295	GCA_900176875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/875/GCA_900176875.1_Bcereus.16-00191	-	16-00191
Mycobacterium tuberculosis TKK_05SA_0021	1448535	PRJNA235540	235540	Terrabacteria group	Actinobacteria	4.40819	65.6	-	JJVT01	68	4294	4117	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586030	GCA_000653515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/515/GCA_000653515.1_Myco_tube_TKK_05SA_0021_V1	-	TKK_05SA_0021
Escherichia coli FVEC1412	656380	PRJNA39917	39917	Proteobacteria	Gammaproteobacteria	5.23418	50.7	-	ACXI01	49	5490	5018	3/16/10	2/22/17	Scaffold	Broad Institute	SAMN02595360	GCA_000163235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/235/GCA_000163235.1_ASM16323v1	-	FVEC1412
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10331	39.7	-	CKGM01	61	2310	2101	3/21/15	3/11/17	Contig	SC	SAMEA1023915	GCA_001092545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/545/GCA_001092545.1_6631_1_15	-	33C
Helicobacter pylori X47-2AL	1386083	PRJNA215156	215156	Proteobacteria	delta/epsilon subdivisions	1.61211	38.9	-	AWNG01	62	1606	1438	11/19/13	3/27/17	Contig	Institut Pasteur	SAMN02469942	GCA_000497465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/465/GCA_000497465.2_HpX47v1	24356847	X47-2AL
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.04486	52.1	-	CMZU01	198	2295	2041	3/23/15	3/17/17	Scaffold	SC	SAMEA1031634	GCA_001131285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/285/GCA_001131285.1_6714_4_23	-	NM2932
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.03865	66	-	JTWQ01	149	6894	6636	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105493	GCA_000795535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/535/GCA_000795535.1_AZPAE14716	25367914	AZPAE14716
Acinetobacter baumannii 1031433	1310586	PRJNA194662	194662	Proteobacteria	Gammaproteobacteria	4.02528	38.9	-	JEYR01	171	4047	3719	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02370992	GCA_000580295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/295/GCA_000580295.1_ASM58029v1	-	1031433
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.06083	35.2	-	LBKM01	20	2120	2003	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435016	GCA_001018065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/065/GCA_001018065.1_ASM101806v1	25946017	BG-PW-031
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.08433	41.2	-	FIOR01	23	2101	2007	2/10/16	3/19/17	Contig	SC	SAMEA1566167	GCA_900050865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/865/GCA_900050865.1_8337_6_65	-	EN253
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.53937	38.3	-	FJKG01	61	3233	3084	2/20/16	3/27/17	Contig	SC	SAMEA2077794	GCA_900063855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/855/GCA_900063855.1_10625_3_28	-	2532STDY5467597
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.53934	50.5	-	CXCO01	418	4850	4325	7/16/15	2/24/17	Scaffold	SC	SAMEA954632	GCA_001252995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/995/GCA_001252995.1_5236_3_6	-	ShIB48279_440830
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.96786	68	-	LXBG01	211	7308	6680	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208731	GCA_001979595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/595/GCA_001979595.1_ASM197959v1	-	MSHR1677
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.07952	47.4	-	MWGE01	319	3828	3701	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263889	GCA_002098085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/085/GCA_002098085.1_ASM209808v1	28219321	CISM_398
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.07049	28.5	-	MOTO01	129	3666	3548	9/14/17	9/16/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710913	GCA_002303715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/715/GCA_002303715.1_ASM230371v1	-	6630-DH/ST42
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.08587	45.3	-	LRST01	48	4918	4677	4/4/16	3/19/17	Contig	Health Canada	SAMN04441026	GCA_001608895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/895/GCA_001608895.1_ASM160889v1	-	H18983
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.68614	56.9	-	LEXG01	7	5738	5467	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280297	GCA_001032075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/075/GCA_001032075.1_Kleb_pneu_CHS156_V1	-	CHS156
Enterococcus faecalis	1351	PRJNA343052	343052	Terrabacteria group	Firmicutes	2.83481	37.5	-	MJBV01	63	2878	2747	3/2/17	3/4/17	Contig	University of Malaya	SAMN05772837	GCA_002009465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/465/GCA_002009465.1_ASM200946v1	-	Enfs85
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.09336	52.6	-	CQOT01	67	2458	2130	3/22/15	4/10/17	Scaffold	SC	SAMEA1690389	GCA_001170125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/125/GCA_001170125.1_8727_8_78	-	GCGS174
Enterococcus faecium	1352	PRJNA278440	278440	Terrabacteria group	Firmicutes	2.8539	38	-	MVGD01	494	2948	2738	2/23/17	2/25/17	Contig	University of Sao Paulo	SAMN06330391	GCA_002005805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/805/GCA_002005805.1_ASM200580v1	-	LIM1530
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.78737	67.8	-	CSSS01	759	3807	3156	3/23/15	3/26/17	Scaffold	SC	SAMEA751519	GCA_001202455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/455/GCA_001202455.1_5633_2_5	-	B011
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66016	31.4	-	FBDI01	21	1723	1625	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683148	GCA_001492315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/315/GCA_001492315.1_EC5240b	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.26051	54.9	-	FKIX01	74	5233	4974	4/11/16	3/28/17	Scaffold	SC	SAMEA2273146	GCA_900076895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/895/GCA_900076895.1_12045_4_24	-	e301
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.95294	64.2	-	FSLW01	21	4902	4774	12/14/16	3/21/17	Contig	SC	SAMEA2070904	GCA_900138765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/765/GCA_900138765.1_10208_3_45	-	470
Pseudomonas sp. NFACC23-1	1566190	PRJEB16791	350913	Proteobacteria	Gammaproteobacteria	6.62175	60.6	-	FNZL01	119	5994	5733	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159382	GCA_900109275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/275/GCA_900109275.1_IMG-taxon_2599185314_annotated_assembly	-	NFACC23-1
Streptomyces sp. cf124	1761903	PRJEB17113	351335	Terrabacteria group	Actinobacteria	9.99521	71.4	-	FOUV01	106	8662	8119	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487980	GCA_900114955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/955/GCA_900114955.1_IMG-taxon_2609459763_annotated_assembly	-	CF124
Streptomyces sp. ok210	1761905	PRJEB17540	352033	Terrabacteria group	Actinobacteria	8.08844	69.7	-	FPAE01	34	7209	6770	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487982	GCA_900116325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/325/GCA_900116325.1_IMG-taxon_2615840540_annotated_assembly	-	OK210
Pseudomonas sp. NFPP18	1566226	PRJEB16843	350958	Proteobacteria	Gammaproteobacteria	6.84325	63.5	-	FNZP01	22	6269	6136	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159324	GCA_900109335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/335/GCA_900109335.1_IMG-taxon_2599185165_annotated_assembly	-	NFPP18
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21284	64.1	-	FVSO01	17	5259	5151	3/10/17	3/18/17	Contig	SC	SAMEA2071554	GCA_900138775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/775/GCA_900138775.1_10208_3_20	-	445
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.84703	55.6	-	FKCP01	36	4773	4544	4/6/16	3/28/17	Scaffold	SC	SAMEA2273211	GCA_900076905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/905/GCA_900076905.1_12045_4_82	-	e302
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.72962	31.2	-	FBPT01	32	1781	1662	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683477	GCA_001492335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/335/GCA_001492335.1_p604A	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.8166	67.9	-	CSOA01	274	3652	3293	3/23/15	3/26/17	Scaffold	SC	SAMEA751127	GCA_001202495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/495/GCA_001202495.1_5515_7_6	-	B141
Enterococcus faecium	1352	PRJNA278440	278440	Terrabacteria group	Firmicutes	2.81509	38.2	-	MVGE01	764	2878	2640	2/23/17	2/25/17	Contig	University of Sao Paulo	SAMN06330390	GCA_002005815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/815/GCA_002005815.1_ASM200581v1	-	LIM918
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.15113	52.4	-	CQJD01	65	2534	2202	3/23/15	4/10/17	Scaffold	SC	SAMEA1677331	GCA_001171225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/225/GCA_001171225.1_8727_5_43	-	GCGS193
Enterococcus faecalis	1351	PRJNA343057	343057	Terrabacteria group	Firmicutes	2.86227	37.4	-	MJBY01	61	2895	2773	3/2/17	3/4/17	Contig	University of Malaya	SAMN05772843	GCA_002009485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/485/GCA_002009485.1_ASM200948v1	-	P.En218
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.82676	56.9	-	LEXH01	15	5914	5656	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280298	GCA_001032105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/105/GCA_001032105.1_Kleb_pneu_CHS157_V1	-	CHS157
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.07495	45.3	-	LRSW01	38	4914	4673	4/4/16	3/19/17	Contig	Health Canada	SAMN04441012	GCA_001608935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/935/GCA_001608935.1_ASM160893v1	-	Sep-19
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.02175	28.5	-	MPFD01	304	3662	3527	9/14/17	9/18/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710936	GCA_002304245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/245/GCA_002304245.1_ASM230424v1	-	7466-DH/ST42
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.03809	47.5	-	MWGF01	109	3852	3689	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263888	GCA_002098135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/135/GCA_002098135.1_ASM209813v1	28219321	CISM_382
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.94868	68	-	LXBF01	212	7255	6637	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208730	GCA_001979615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/615/GCA_001979615.1_ASM197961v1	-	MSHR1676
Shigella sonnei	624	PRJEB2460	204320	Proteobacteria	Gammaproteobacteria	4.82595	50.7	-	CXGN01	530	5659	4633	7/17/15	2/24/17	Scaffold	SC	SAMEA1027718	GCA_001253015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/015/GCA_001253015.1_7353_1_18	-	H112620252
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54057	38.3	-	FJKH01	63	3235	3089	2/20/16	3/27/17	Contig	SC	SAMEA2077793	GCA_900063865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/865/GCA_900063865.1_10625_3_25	-	2532STDY5467594
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04674	41.2	-	FIOV01	29	2075	1956	2/10/16	3/19/17	Contig	SC	SAMEA1566042	GCA_900050875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/875/GCA_900050875.1_8337_6_69	-	EN314
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.00149	35.2	-	LBKN01	18	2065	1944	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435017	GCA_001018085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/085/GCA_001018085.1_ASM101808v1	25946017	BG-PW-056
Acinetobacter baumannii 1297	1310580	PRJNA194656	194656	Proteobacteria	Gammaproteobacteria	3.84221	39	-	JEZJ01	36	3713	3455	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02371037	GCA_000580315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/315/GCA_000580315.1_ASM58031v1	-	1297
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.7483	66.1	-	JTWW01	147	6448	6217	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105487	GCA_000795605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/605/GCA_000795605.1_AZPAE14710	25367914	AZPAE14710
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.06029	52.1	-	CMZA01	162	2315	2069	3/23/15	3/21/17	Scaffold	SC	SAMEA1031705	GCA_001131325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/325/GCA_001131325.1_6714_3_4	-	NM2187
Helicobacter pylori Sahul64	1222003	PRJNA172821	172821	Proteobacteria	delta/epsilon subdivisions	1.64427	38.8	-	ALWV01	54	1630	1463	1/6/14	3/24/17	Contig	The University of Western Australia	SAMN02597453	GCA_000513515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/515/GCA_000513515.1_Velvet	24375107	Sahul64
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.31943	39.7	-	CKZN01	54	2536	2305	3/21/15	3/11/17	Contig	SC	SAMEA1025955	GCA_001092605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/605/GCA_001092605.1_6840_1_23	-	SMRU1775
Escherichia coli MS 198-1	749549	PRJNA47273	47273	Proteobacteria	Gammaproteobacteria	5.26997	50.6	-	ADTJ01	215	5527	5155	5/21/10	2/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189178	GCA_000164195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/195/GCA_000164195.1_ASM16419v1	-	MS 198-1
Mycobacterium tuberculosis TKK_05SA_0023	1448536	PRJNA235541	235541	Terrabacteria group	Actinobacteria	4.38748	65.6	-	JJVS01	82	4319	4111	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586031	GCA_000653535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/535/GCA_000653535.1_Myco_tube_TKK_05SA_0023_V1	-	TKK_05SA_0023
Bacillus cereus	1396	PRJEB20065	387332	Terrabacteria group	Firmicutes	5.6125	35.2	-	FWZF01	117	6115	5762	5/20/17	5/24/17	Scaffold	INSTITUT PASTEUR	SAMEA103956288	GCA_900176895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/895/GCA_900176895.1_Bcereus.16-00176	-	16-00176
Listeria monocytogenes	1639	PRJNA212117	212117	Terrabacteria group	Firmicutes	2.98129	38	-	JSWS01	1	3039	2919	11/5/14	2/26/17	Contig	"Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention"	SAMN02463190	GCA_000772595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/595/GCA_000772595.1_PDT000001971.1	-	PNUSAL000474
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.63528	30.5	-	CUTI01	20	1737	1615	3/31/15	3/18/17	Contig	SC	SAMEA1401259	GCA_001233545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/545/GCA_001233545.1_7213_3_26	-	OXC6569
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120970	1412542	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007380.2/CP007380.2	-	1	4707	4449	4/2/14	3/2/17	Chromosome	LFZ	SAMN02384263	GCA_000625235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/235/GCA_000625235.2_ASM62523v2	24786953	EC20120970
Staphylococcus aureus DAR1366	1409747	PRJNA224165	224165	Terrabacteria group	Firmicutes	2.88096	32.8	-	JBSV01	12	3029	2864	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02383532	GCA_000525165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/165/GCA_000525165.1_Stap_aure_DAR1366_V1	-	DAR1366
Staphylococcus aureus DAR1503	1409748	PRJNA224166	224166	Terrabacteria group	Firmicutes	2.90039	32.9	-	JBSW01	11	3058	2891	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02383533	GCA_000525185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/185/GCA_000525185.1_Stap_aure_DAR1503_V1	-	DAR1503
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121812	1412571	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007381.2/CP007381.2	-	1	4709	4452	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384292	GCA_000625255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/255/GCA_000625255.2_ASM62525v2	24786953	EC20121812
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.60754	30.4	-	CUKP01	13	1676	1581	3/31/15	3/18/17	Contig	SC	SAMEA1010484	GCA_001233585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/585/GCA_001233585.1_7038_3_80	-	OXC6330
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.9469	37.8	-	JRYY01	18	2992	2906	11/17/14	2/26/17	Contig	FDA/CFSAN	SAMN02769795	GCA_000787895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/895/GCA_000787895.1_LS884	25540336	MOD1_LS884
Bacillus cereus	1396	PRJEB20065	387332	Terrabacteria group	Firmicutes	5.40609	35.2	-	FWYV01	127	5864	5517	5/20/17	5/24/17	Scaffold	INSTITUT PASTEUR	SAMEA103956289	GCA_900176915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/915/GCA_900176915.1_Bcereus.16-00175	-	16-00175
Mycobacterium tuberculosis TKK_05SA_0025	1448538	PRJNA235543	235543	Terrabacteria group	Actinobacteria	4.44975	65.6	-	JJVQ01	72	4360	4154	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586033	GCA_000653555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/555/GCA_000653555.1_Myco_tube_TKK_05SA_0025_V1	-	TKK_05SA_0025
Escherichia coli MS 84-1	749533	PRJNA47219	47219	Proteobacteria	Gammaproteobacteria	5.29244	50.5	-	ADTK01	182	5580	5181	5/21/10	2/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189187	GCA_000164215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/215/GCA_000164215.1_ASM16421v1	-	MS 84-1
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05054	39.7	-	CLXW01	53	2232	1998	3/21/15	3/11/17	Contig	SC	SAMEA1028941	GCA_001092645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/645/GCA_001092645.1_6983_6_33	-	SMRU2337
Helicobacter pylori HLJ039	1442601	PRJNA232950	232950	Proteobacteria	delta/epsilon subdivisions	1.61	38.7	-	JAAA01	34	1612	1428	1/21/14	3/24/17	Contig	"State Key Laboratory for Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02597427	GCA_000521245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/245/GCA_000521245.1_Helicobacter_pylori_HLJ039	24565107	HLJ039
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.06315	52.1	-	CMYC01	152	2323	2069	3/22/15	3/21/17	Scaffold	SC	SAMEA1031695	GCA_001134645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/645/GCA_001134645.1_6714_2_18	-	NM1937
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.63904	66.1	-	JTWJ01	171	6343	6087	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105500	GCA_000795705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/705/GCA_000795705.1_AZPAE14723	25367914	AZPAE14723
Acinetobacter baumannii 136706	1310558	PRJNA194634	194634	Proteobacteria	Gammaproteobacteria	4.13657	39	-	JEZH01	215	4126	3836	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02371038	GCA_000580335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/335/GCA_000580335.1_ASM58033v1	-	136706
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	1.93322	35.2	-	LBKO01	31	1972	1822	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435018	GCA_001018095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/095/GCA_001018095.1_ASM101809v1	25946017	BG-PW-074
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.06535	41.1	-	FIQF01	25	2068	1963	2/10/16	3/19/17	Contig	SC	SAMEA1566041	GCA_900050885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/885/GCA_900050885.1_8525_5_44	-	SS44
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54167	38.3	-	FJKN01	63	3238	3094	2/20/16	3/27/17	Contig	SC	SAMEA1964385	GCA_900063875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/875/GCA_900063875.1_10625_3_20	-	2532STDY5467589
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.90856	50.5	-	CXLK01	406	5499	4700	7/17/15	2/24/17	Scaffold	SC	SAMEA2164642	GCA_001253075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/075/GCA_001253075.1_8290_4_96	-	124496
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.9627	68.1	-	LXBH01	205	7284	6673	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208732	GCA_001979645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/645/GCA_001979645.1_ASM197964v1	-	MSHR1678
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.0311	47.5	-	MWGG01	126	3797	3683	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263887	GCA_002098145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/145/GCA_002098145.1_ASM209814v1	28219321	CISM_375
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.12626	28.7	-	MPGF01	137	3729	3600	9/14/17	9/18/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710932	GCA_002304255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/255/GCA_002304255.1_ASM230425v1	-	7462-DH/ST42
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.1207	45.2	-	LRSV01	32	4944	4708	4/4/16	3/19/17	Contig	Health Canada	SAMN04441010	GCA_001608945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/945/GCA_001608945.1_ASM160894v1	-	Jul-64
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.88276	56.9	-	LEXI01	12	5979	5700	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280299	GCA_001032115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/115/GCA_001032115.1_Kleb_pneu_CHS158_V1	-	CHS158
Enterococcus faecalis	1351	PRJNA343053	343053	Terrabacteria group	Firmicutes	2.62558	37.7	-	MJBW01	53	2614	2508	3/2/17	3/4/17	Contig	University of Malaya	SAMN05772838	GCA_002009495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/495/GCA_002009495.1_ASM200949v1	-	Enfs94
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.14899	52.4	-	CHDX01	72	2525	2192	4/21/15	4/11/17	Scaffold	SC	SAMEA1677316	GCA_001319065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/065/GCA_001319065.1_8727_5_63	-	GCGS213
Enterococcus faecium	1352	PRJNA278440	278440	Terrabacteria group	Firmicutes	2.79884	37.9	-	MVGG01	380	2858	2675	2/23/17	2/25/17	Contig	University of Sao Paulo	SAMN06330395	GCA_002005825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/825/GCA_002005825.1_ASM200582v1	-	LIM1590
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.77921	67.8	-	CSOF01	590	3757	3183	3/23/15	3/26/17	Scaffold	SC	SAMEA751413	GCA_001202575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/575/GCA_001202575.1_5476_3_9	-	B103
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.58529	31.7	-	FBMW01	20	1587	1521	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683400	GCA_001492355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/355/GCA_001492355.1_p494C	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.97737	55.1	-	FKIW01	50	4924	4614	4/11/16	3/28/17	Scaffold	SC	SAMEA2273148	GCA_900076915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/915/GCA_900076915.1_12045_4_25	-	e317
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.10594	64.1	-	FVST01	65	5150	4986	3/10/17	3/18/17	Contig	SC	SAMEA1970161	GCA_900138785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/785/GCA_900138785.1_10208_3_47	-	472
Pseudomonas sp. NFACC41-3	1566194	PRJEB16829	350979	Proteobacteria	Gammaproteobacteria	6.49258	63	-	FOAE01	12	5893	5735	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159414	GCA_900109505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/505/GCA_900109505.1_IMG-taxon_2599185257_annotated_assembly	-	NFACC41-3
Streptomyces sp. Amel2xC10	1305826	PRJEB20424	382907	Terrabacteria group	Actinobacteria	7.9762	72	-	FWZW01	53	7227	6894	4/19/17	4/22/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745830	GCA_900177255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/255/GCA_900177255.1_IMG-taxon_2524614730_annotated_assembly	-	Amel2xC10
Streptomyces sp. PgraA7	1157641	PRJEB21380	391619	Terrabacteria group	Actinobacteria	8.31768	71.5	-	FYEJ01	49	7496	7151	6/23/17	6/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745831	GCA_900187925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/925/GCA_900187925.1_IMG-taxon_2524614673_annotated_assembly	-	PgraA7
Pseudomonas sp. NFPP10	1566210	PRJEB16822	350976	Proteobacteria	Gammaproteobacteria	6.95725	63.4	-	FOAQ01	22	6306	6155	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159355	GCA_900109535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/535/GCA_900109535.1_IMG-taxon_2599185162_annotated_assembly	-	NFPP10
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.94886	64.2	-	FVSY01	13	4935	4785	3/10/17	3/18/17	Contig	SC	SAMEA2069149	GCA_900138795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/795/GCA_900138795.1_10208_3_49	-	474
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.91024	54.7	-	FKDN01	55	4810	4561	4/6/16	3/28/17	Scaffold	SC	SAMEA2273149	GCA_900076925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/925/GCA_900076925.1_12045_4_26	-	e318
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.59916	31.7	-	FBPO01	31	1606	1539	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683469	GCA_001492375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/375/GCA_001492375.1_H063720401	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.65679	67.4	-	CSPI01	950	3687	2886	3/22/15	3/26/17	Scaffold	SC	SAMEA1931350	GCA_001202695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/695/GCA_001202695.1_5463_7_1	-	B170
Enterococcus faecium	1352	PRJNA278440	278440	Terrabacteria group	Firmicutes	2.89688	38	-	MVGF01	495	2981	2782	2/23/17	2/25/17	Contig	University of Sao Paulo	SAMN06330394	GCA_002005875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/875/GCA_002005875.1_ASM200587v1	-	LIM1586
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.09748	52.6	-	CHZN01	70	2457	2129	4/21/15	4/11/17	Scaffold	SC	SAMEA1677404	GCA_001319105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/105/GCA_001319105.1_8727_5_48	-	GCGS198
Enterococcus faecalis	1351	PRJNA343058	343058	Terrabacteria group	Firmicutes	2.83415	37.5	-	MJBZ01	42	2871	2758	3/2/17	3/4/17	Contig	University of Malaya	SAMN05772844	GCA_002009545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/545/GCA_002009545.1_ASM200954v1	-	P.En250
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.70039	57	-	LEXJ01	13	5708	5386	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280300	GCA_001032125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/125/GCA_001032125.1_Kleb_pneu_CHS159_V1	-	CHS159
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.17612	45.2	-	LRTH01	47	5035	4783	4/4/16	3/19/17	Contig	Health Canada	SAMN04441013	GCA_001609015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/015/GCA_001609015.1_ASM160901v1	-	Sep-62
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.21623	28.3	-	MPGD01	82	3897	3732	9/14/17	9/18/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710951	GCA_002304265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/265/GCA_002304265.1_ASM230426v1	-	7486-A/ST43
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.04027	47.5	-	MWGH01	120	3840	3697	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263886	GCA_002098155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/155/GCA_002098155.1_ASM209815v1	28219321	CISM_374
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.96749	68	-	LXBI01	108	7263	6709	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208733	GCA_001979665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/665/GCA_001979665.1_ASM197966v1	-	MSHR1679
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.56561	51	-	CXDF01	469	4782	4206	7/16/15	2/24/17	Scaffold	SC	SAMEA954711	GCA_001253095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/095/GCA_001253095.1_5236_6_6	-	Sh1263_440934
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54098	38.3	-	FJKO01	62	3235	3090	2/20/16	3/27/17	Contig	SC	SAMEA2080697	GCA_900063885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/885/GCA_900063885.1_10625_3_32	-	2532STDY5467601
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.06767	41.1	-	FIRR01	20	2070	1968	2/10/16	3/19/17	Contig	SC	SAMEA1566032	GCA_900050895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/895/GCA_900050895.1_8525_5_83	-	VS3756
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.07334	35.3	-	LBKP01	20	2151	2014	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435019	GCA_001018135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/135/GCA_001018135.1_ASM101813v1	25946017	CZ-PW-143
Acinetobacter baumannii 1121032	1310598	PRJNA194674	194674	Proteobacteria	Gammaproteobacteria	4.15106	39	-	JEZE02	81	4069	3815	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02371033	GCA_000580355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/355/GCA_000580355.2_ASM58035v2	-	1121032
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.88827	66	-	JTXA01	240	6693	6390	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105483	GCA_000795805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/805/GCA_000795805.1_AZPAE14705	25367914	AZPAE14705
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05716	52.1	-	CMZH01	233	2329	2052	3/23/15	3/21/17	Scaffold	SC	SAMEA1031679	GCA_001134725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/725/GCA_001134725.1_6714_4_12	-	NM2717
Helicobacter pylori wls-5-1	1451267	PRJNA236057	236057	Proteobacteria	delta/epsilon subdivisions	1.63248	38.7	-	JCKE01	72	1619	1471	3/17/14	3/24/17	Contig	Academy of Military Medical Sciences	SAMN02593663	GCA_000591095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/095/GCA_000591095.1_wls-5-1	-	wls-5-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.03139	39.6	-	CNWE02	125	2199	2001	3/23/15	3/11/17	Contig	SC	SAMEA1032623	GCA_001092705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/705/GCA_001092705.2_7001_1_18	-	R34-3095
Escherichia coli MS 115-1	749537	PRJNA47227	47227	Proteobacteria	Gammaproteobacteria	4.82231	50.7	-	ADTL01	161	4939	4611	5/21/10	2/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189164	GCA_000164235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/235/GCA_000164235.1_ASM16423v1	-	MS 115-1
Mycobacterium tuberculosis TKK_05SA_0031	1448540	PRJNA235545	235545	Terrabacteria group	Actinobacteria	4.38874	65.6	-	JJVO01	84	4318	4101	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586035	GCA_000653575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/575/GCA_000653575.1_Myco_tube_TKK_05SA_0031_V1	-	TKK_05SA_0031
Bacillus cereus	1396	PRJEB20065	387332	Terrabacteria group	Firmicutes	5.585	35.3	-	FWYW01	117	6082	5734	5/20/17	5/24/17	Scaffold	INSTITUT PASTEUR	SAMEA103956287	GCA_900176925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/925/GCA_900176925.1_Bcereus.16-00174	-	16-00174
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	3.02258	37.8	-	JRZA01	17	3092	2997	11/17/14	2/26/17	Contig	FDA/CFSAN	SAMN02769798	GCA_000787905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/905/GCA_000787905.1_LS889	25540336	MOD1_LS889
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.68117	30.5	-	CUHV01	18	1777	1676	3/31/15	3/18/17	Contig	SC	SAMEA1010435	GCA_001233625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/625/GCA_001233625.1_7038_3_15	-	OXC6264
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121825	1412526	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007382.2/CP007382.2	-	1	4708	4449	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384247	GCA_000625275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/275/GCA_000625275.2_ASM62527v2	24786953	EC20121825
Staphylococcus aureus DAR3170	1409749	PRJNA224167	224167	Terrabacteria group	Firmicutes	2.73043	32.8	-	JBSX01	7	2824	2674	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02383534	GCA_000525205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/205/GCA_000525205.1_Stap_aure_DAR3170_V1	-	DAR3170
Staphylococcus aureus DAR3172	1409750	PRJNA224168	224168	Terrabacteria group	Firmicutes	2.80206	32.9	-	JBSY01	14	2911	2755	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02383535	GCA_000525225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/225/GCA_000525225.1_Stap_aure_DAR3172_V1	-	DAR3172
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121826	1412527	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.6857	52.2	chromosome:NZ_CP007383.2/CP007383.2	-	1	4708	4450	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384248	GCA_000625295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/295/GCA_000625295.2_ASM62529v2	24786953	EC20121826
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.62752	30.5	-	CUMO01	15	1697	1594	3/31/15	3/18/17	Contig	SC	SAMEA1010307	GCA_001233645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/645/GCA_001233645.1_7065_7_4	-	OXC6350
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.93555	37.9	-	JRYZ01	16	3018	2924	11/17/14	2/27/17	Contig	FDA/CFSAN	SAMN02769796	GCA_000787915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/915/GCA_000787915.1_LS885	25540336	MOD1_LS885
Bacillus cereus	1396	PRJEB20065	387332	Terrabacteria group	Firmicutes	5.62152	35	-	FWZJ01	128	5907	5606	5/20/17	5/24/17	Scaffold	INSTITUT PASTEUR	SAMEA103956300	GCA_900176935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/935/GCA_900176935.1_Bcereus.16-00198	-	16-00198
Mycobacterium tuberculosis TKK_05SA_0036	1448542	PRJNA235547	235547	Terrabacteria group	Actinobacteria	4.41309	65.6	-	JJVN01	76	4332	4143	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586037	GCA_000653595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/595/GCA_000653595.1_Myco_tube_TKK_05SA_0036_V1	-	TKK_05SA_0036
Escherichia coli MS 182-1	749545	PRJNA47265	47265	Proteobacteria	Gammaproteobacteria	5.00334	50.5	-	ADTM01	171	5201	4834	5/21/10	2/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189174	GCA_000164255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/255/GCA_000164255.1_ASM16425v1	-	MS 182-1
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.04389	39.7	-	CMEK01	69	2248	2028	3/21/15	3/4/17	Contig	SC	SAMEA1028687	GCA_001092725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/725/GCA_001092725.1_7011_5_12	-	SMRU2796
Helicobacter pylori wls-5-2	1451266	PRJNA236061	236061	Proteobacteria	delta/epsilon subdivisions	1.62163	38.7	-	JCKD01	75	1596	1452	3/17/14	3/24/17	Contig	Academy of Military Medical Sciences	SAMN02952975	GCA_000591115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/115/GCA_000591115.1_wls-5-2	-	wls-5-2
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.06511	52	-	CMYH01	141	2351	2067	3/22/15	3/21/17	Scaffold	SC	SAMEA1031645	GCA_001136445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/445/GCA_001136445.1_6714_2_8	-	NM1891
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.70754	66.1	-	JTWX01	187	6484	6231	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105486	GCA_000795815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/815/GCA_000795815.1_AZPAE14708	25367914	AZPAE14708
Acinetobacter baumannii 1051176	1310583	PRJNA194659	194659	Proteobacteria	Gammaproteobacteria	3.85914	39.1	-	JEZB01	71	3767	3548	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02371030	GCA_000580375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/375/GCA_000580375.1_ASM58037v1	-	1051176
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.23346	35.7	-	LBKQ01	37	2290	2104	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435020	GCA_001018155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/155/GCA_001018155.1_ASM101815v1	25946017	DE-NI-024
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.07172	41.2	-	FISY01	26	2080	1984	2/10/16	3/19/17	Contig	SC	SAMEA1566198	GCA_900050905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/905/GCA_900050905.1_8525_5_5	-	FX328_4
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.46406	38.3	-	FJLN01	39	3161	3037	2/20/16	3/27/17	Contig	SC	SAMEA2077984	GCA_900063905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/905/GCA_900063905.1_10625_3_60	-	2532STDY5467629
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.40593	50.9	-	CXDL01	417	4686	4213	7/16/15	2/24/17	Scaffold	SC	SAMEA954671	GCA_001253115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/115/GCA_001253115.1_5236_7_6	-	Sh2574_441043
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.94193	68.1	-	LXBJ01	148	7227	6650	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208734	GCA_001979675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/675/GCA_001979675.1_ASM197967v1	-	MSHR1682
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.04958	47.5	-	MWGI01	129	3853	3696	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263885	GCA_002098195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/195/GCA_002098195.1_ASM209819v1	28219321	CISM_347
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.09821	28.5	-	MOPR01	82	3765	3616	9/14/17	9/18/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710855	GCA_002304575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/575/GCA_002304575.1_ASM230457v1	-	5504-L/ST55
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.1733	45.2	-	LRSX01	53	5038	4772	4/4/16	3/19/17	Contig	Health Canada	SAMN04441011	GCA_001609025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/025/GCA_001609025.1_ASM160902v1	-	09-1772
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.6483	57	-	LEXK01	17	5681	5414	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280301	GCA_001032145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/145/GCA_001032145.1_Kleb_pneu_CHS160_V1	-	CHS160
Enterococcus faecalis	1351	PRJNA343055	343055	Terrabacteria group	Firmicutes	3.07109	37.2	-	MJBX01	60	3109	2943	3/2/17	3/4/17	Contig	University of Malaya	SAMN05772842	GCA_002009565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/565/GCA_002009565.1_ASM200956v1	-	P. En090
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.09542	52.6	-	CGCM01	73	2455	2129	3/15/15	4/11/17	Scaffold	SC	SAMEA1677411	GCA_001319125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/125/GCA_001319125.1_8727_5_74	-	GCGS224
Enterococcus faecium	1352	PRJNA278440	278440	Terrabacteria group	Firmicutes	2.87232	38	-	MVGH01	427	2950	2757	2/23/17	2/25/17	Contig	University of Sao Paulo	SAMN06330397	GCA_002005885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/885/GCA_002005885.1_ASM200588v1	-	LIM4247
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.69952	67.6	-	CSRI01	876	3745	2996	3/23/15	3/26/17	Scaffold	SC	SAMEA751158	GCA_001202875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/875/GCA_001202875.1_5515_8_10	-	B074
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68636	31.3	-	FBIY01	28	1753	1662	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683296	GCA_001492395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/395/GCA_001492395.1_CCN293	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.70063	55.6	-	FKDP01	28	4535	4339	4/6/16	3/28/17	Scaffold	SC	SAMEA2273152	GCA_900076935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/935/GCA_900076935.1_12045_4_29	-	e332
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.20239	64.1	-	FVSQ01	12	5318	5156	3/10/17	3/18/17	Contig	SC	SAMEA2069148	GCA_900138805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/805/GCA_900138805.1_10208_3_46	-	471
Pseudomonas sp. ok272	1761897	PRJEB16894	350951	Proteobacteria	Gammaproteobacteria	5.29391	61.4	-	FOCB01	50	4887	4678	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487857	GCA_900109995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/995/GCA_900109995.1_IMG-taxon_2609459710_annotated_assembly	-	OK272
Streptomyces sp. PBH53	1577075	PRJNA268366	268366	Terrabacteria group	Actinobacteria	9.1536	72.7	chromosome:CP011799.1	-	1	7975	7433	6/26/15	8/5/15	Chromosome	University Of Ottawa	SAMN03218484	GCA_001040905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/040/905/GCA_001040905.1_ASM104090v1	-	PBH53
Streptomyces sp. C	253839	PRJNA33601	33601	Terrabacteria group	Actinobacteria	8.46133	67.9	-	ACEW01	4	7611	7540	2/26/09	5/13/16	Scaffold	Broad Institute	SAMN02595298	GCA_000158895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/158/895/GCA_000158895.1_ASM15889v1	-	C
Pseudomonas sp. ok266	1761896	PRJEB16917	351048	Proteobacteria	Gammaproteobacteria	6.58172	59.2	-	FOCU01	31	5937	5764	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487856	GCA_900110195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/195/GCA_900110195.1_IMG-taxon_2609459675_annotated_assembly	-	OK266
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21302	64.1	-	FVSU01	18	5265	5154	3/10/17	3/18/17	Contig	SC	SAMEA2070905	GCA_900138815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/815/GCA_900138815.1_10208_3_48	-	473
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.98823	54.8	-	FKCZ01	76	4910	4636	4/6/16	3/28/17	Scaffold	SC	SAMEA2273147	GCA_900076945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/945/GCA_900076945.1_12082_4_39	-	e316
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75426	31.1	-	FBPS01	31	1814	1704	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683475	GCA_001492415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/415/GCA_001492415.1_H114640463b	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.77363	67.7	-	CSRB01	776	3811	3129	3/23/15	3/26/17	Scaffold	SC	SAMEA751470	GCA_001203115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/115/GCA_001203115.1_5476_5_11	-	B031
Enterococcus faecium	1352	PRJNA278440	278440	Terrabacteria group	Firmicutes	2.95868	37.8	-	MVGI01	944	3077	2754	2/23/17	2/25/17	Contig	University of Sao Paulo	SAMN06330398	GCA_002005905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/905/GCA_002005905.1_ASM200590v1	-	LIM4275
Neisseria gonorrhoeae	485	PRJEB2090	203712	Proteobacteria	Betaproteobacteria	2.15037	52.4	-	CHZO01	71	2531	2203	4/21/15	4/11/17	Scaffold	SC	SAMEA1677423	GCA_001319145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/145/GCA_001319145.1_8727_5_61	-	GCGS211
Enterococcus faecalis	1351	PRJNA342049	342049	Terrabacteria group	Firmicutes	2.91332	37.3	-	MJEC01	34	2934	2794	4/3/17	4/5/17	Contig	Lethbridge Research Centre	SAMN05735026	GCA_002077445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/445/GCA_002077445.1_ASM207744v1	28270110	F1213D 146
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.43357	57.2	-	LEXL01	13	5413	5123	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280302	GCA_001032185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/185/GCA_001032185.1_Kleb_pneu_CHS161_V1	-	CHS161
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.1102	45.3	-	LRSZ01	31	4931	4716	4/4/16	3/19/17	Contig	Health Canada	SAMN04441015	GCA_001609075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/075/GCA_001609075.1_ASM160907v1	-	A1EZ679
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	4.05086	28.3	-	MOQZ01	83	3705	3573	9/14/17	9/18/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710882	GCA_002304585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/585/GCA_002304585.1_ASM230458v1	-	6592-G/ST8
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.16353	47.6	-	MWGJ01	108	4009	3856	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263884	GCA_002098215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/215/GCA_002098215.1_ASM209821v1	28219321	CISM_326
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.97224	68	-	LXBK01	101	7250	6698	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208735	GCA_001979695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/695/GCA_001979695.1_ASM197969v1	-	MSHR1683
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.75109	50.7	-	CXMQ01	395	5371	4586	7/16/15	2/24/17	Scaffold	SC	SAMEA2057220	GCA_001253135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/135/GCA_001253135.1_9870_6_23	-	143562
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.48789	38.3	-	FJLQ01	39	3191	3062	2/20/16	3/27/17	Contig	SC	SAMEA1966904	GCA_900063915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/915/GCA_900063915.1_10625_3_61	-	2532STDY5467630
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.10826	41	-	FIJE01	106	2161	1996	2/10/16	3/19/17	Contig	SC	SAMEA1316618	GCA_900051255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/255/GCA_900051255.1_7054_7_20	-	SS1007
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.13816	35.2	-	LBKS01	24	2191	2054	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435022	GCA_001018165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/165/GCA_001018165.1_ASM101816v1	25946017	DE-PW-406
Acinetobacter baumannii 1046674	1310567	PRJNA194643	194643	Proteobacteria	Gammaproteobacteria	3.99357	38.9	-	JEZA01	203	4039	3761	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02371029	GCA_000580395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/395/GCA_000580395.1_ASM58039v1	-	1046674
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.09109	65.8	-	JTWI01	171	6876	6589	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105501	GCA_000795865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/865/GCA_000795865.1_AZPAE14724	25367914	AZPAE14724
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05319	52.1	-	CMXU01	164	2305	2062	3/23/15	3/17/17	Scaffold	SC	SAMEA1031672	GCA_001137985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/985/GCA_001137985.1_6714_2_10	-	NM1893
Helicobacter pylori wls-5-7	1460438	PRJNA237684	237684	Proteobacteria	delta/epsilon subdivisions	1.63432	38.9	-	JDVS01	255	1632	1437	3/17/14	3/24/17	Contig	Academy of Military Medical Sciences	SAMN02639406	GCA_000591135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/135/GCA_000591135.1_wls-5-7	-	wls-5-7
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.18257	39.7	-	CLBC01	77	2412	2164	3/21/15	3/4/17	Contig	SC	SAMEA1025539	GCA_001092825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/825/GCA_001092825.1_6841_7_4	-	SMRU1324
Escherichia coli MS 146-1	749540	PRJNA47241	47241	Proteobacteria	Gammaproteobacteria	4.74434	50.7	-	ADTN01	135	4888	4563	5/21/10	2/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189170	GCA_000164275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/275/GCA_000164275.1_ASM16427v1	-	MS 146-1
Mycobacterium tuberculosis TKK_05SA_0041	1448544	PRJNA235549	235549	Terrabacteria group	Actinobacteria	4.4122	65.6	-	JJVM01	69	4320	4128	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586039	GCA_000653615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/615/GCA_000653615.1_Myco_tube_TKK_05SA_0041_V1	-	TKK_05SA_0041
Bacillus cereus	1396	PRJEB20065	387332	Terrabacteria group	Firmicutes	5.90898	34.9	-	FWYT01	230	6346	5934	5/20/17	6/16/17	Scaffold	INSTITUT PASTEUR	SAMEA103956291	GCA_900176955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/955/GCA_900176955.1_Bcereus.16-00184	-	16-00184
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.8677	37.9	-	JRZB01	10	2912	2838	11/17/14	2/26/17	Contig	FDA/CFSAN	SAMN02769791	GCA_000787925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/925/GCA_000787925.1_LS743	25540336	MOD1_LS743
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.6815	30.3	-	CUMT01	18	1776	1654	3/31/15	3/18/17	Contig	SC	SAMEA1010608	GCA_001233665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/665/GCA_001233665.1_7065_7_44	-	OXC6390
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121969	1412583	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007384.2/CP007384.2	-	1	4709	4447	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384304	GCA_000625315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/315/GCA_000625315.2_ASM62531v2	24786953	EC20121969
Staphylococcus aureus DAR3165	1409751	PRJNA224169	224169	Terrabacteria group	Firmicutes	2.86324	32.8	-	JBSZ01	22	2969	2836	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02383536	GCA_000525245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/245/GCA_000525245.1_Stap_aure_DAR3165_V1	-	DAR3165
Staphylococcus aureus DAR5898	1409752	PRJNA224170	224170	Terrabacteria group	Firmicutes	2.95405	33	-	JBTA01	12	3095	2916	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02383537	GCA_000525265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/265/GCA_000525265.1_Stap_aure_DAR5898_V1	-	DAR5898
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121970	1412582	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007385.2/CP007385.2	-	1	4709	4447	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384303	GCA_000625335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/335/GCA_000625335.2_ASM62533v2	24786953	EC20121970
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.81323	30.1	-	CUTZ01	28	1933	1813	3/31/15	3/18/17	Contig	SC	SAMEA1401638	GCA_001233805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/805/GCA_001233805.1_7213_3_41	-	OXC6584
Listeria monocytogenes SHL004	1302624	PRJNA192199	192199	Terrabacteria group	Firmicutes	3.00626	37.8	-	APID01	17	3090	2987	12/15/14	2/26/17	Contig	"University of Maryland, College Park"	SAMN03265956	GCA_000801375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/375/GCA_000801375.1_L_monocytogenes_SHL004_v1.0	-	SHL004
Bacillus cereus	1396	PRJEB20065	387332	Terrabacteria group	Firmicutes	5.57036	35	-	FWYZ01	98	5938	5605	5/20/17	6/15/17	Scaffold	INSTITUT PASTEUR	SAMEA103956297	GCA_900176965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/965/GCA_900176965.1_Bcereus.16-00195	-	16-00195
Mycobacterium tuberculosis TKK_05SA_0042	1448545	PRJNA235550	235550	Terrabacteria group	Actinobacteria	4.40128	65.6	-	JJVL01	71	4317	4115	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586040	GCA_000653635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/635/GCA_000653635.1_Myco_tube_TKK_05SA_0042_V1	-	TKK_05SA_0042
Escherichia coli MS 45-1	749528	PRJNA47207	47207	Proteobacteria	Gammaproteobacteria	5.01776	50.3	-	ADTO01	152	5141	4779	5/21/10	2/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189181	GCA_000164295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/295/GCA_000164295.1_ASM16429v1	-	MS 45-1
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.05185	39.7	-	CLBN01	52	2269	2034	3/21/15	3/4/17	Contig	SC	SAMEA1025792	GCA_001092885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/885/GCA_001092885.1_6871_1_16	-	SMRU1792
Helicobacter pylori wls-5-9	1460427	PRJNA237694	237694	Proteobacteria	delta/epsilon subdivisions	1.62988	38.7	-	JDVQ01	78	1610	1471	3/17/14	3/24/17	Contig	Academy of Military Medical Sciences	SAMN02639408	GCA_000591155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/155/GCA_000591155.1_wls-5-9	-	wls-5-9
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.04271	52.1	-	CMZF01	181	2298	2042	3/23/15	3/21/17	Scaffold	SC	SAMEA1031734	GCA_001139145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/145/GCA_001139145.1_6714_3_22	-	NM2389
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.9104	66	-	JTWO01	231	6689	6363	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105495	GCA_000795905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/905/GCA_000795905.1_AZPAE14718	25367914	AZPAE14718
Acinetobacter baumannii 1043794	1310564	PRJNA194640	194640	Proteobacteria	Gammaproteobacteria	4.00966	39.1	-	JEYX01	51	3841	3622	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02371026	GCA_000580415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/415/GCA_000580415.1_ASM58041v1	-	1043794
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.0409	35.3	-	LBKR01	31	2090	1932	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435021	GCA_001018175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/175/GCA_001018175.1_ASM101817v1	25946017	DE-NI-035
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.10233	41.1	-	FIKW01	29	2113	1965	2/10/16	3/19/17	Contig	SC	SAMEA1316516	GCA_900051275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/275/GCA_900051275.1_7054_7_92	-	SS1061
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.48692	38.3	-	FJLO01	37	3192	3056	2/20/16	3/27/17	Contig	SC	SAMEA2078036	GCA_900063925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/925/GCA_900063925.1_10625_3_91	-	2532STDY5467660
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.82905	50.8	-	CWXH01	432	5677	4655	7/16/15	2/24/17	Scaffold	SC	SAMEA2434388	GCA_001253195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/195/GCA_001253195.1_12844_1_61	-	21166370
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.92636	68	-	LXBL01	106	7231	6670	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208736	GCA_001979725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/725/GCA_001979725.1_ASM197972v1	-	MSHR1684
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.20752	47.6	-	MWGL01	106	4074	3907	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263882	GCA_002098225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/225/GCA_002098225.1_ASM209822v1	28219321	CISM_302015
Clostridioides difficile	1496	PRJDB5562	400872	Terrabacteria group	Firmicutes	4.21715	28.4	-	BDSN01	94	3850	3810	8/30/17	9/23/17	Contig	National Cheng Kung University	SAMD00075721	GCA_002335485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/335/485/GCA_002335485.1_ASM233548v1	-	NCKUH-21
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.09353	45.3	-	LRTA01	33	4929	4695	4/4/16	3/19/17	Contig	Health Canada	SAMN04441016	GCA_001609095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/095/GCA_001609095.1_ASM160909v1	-	A2EZ523
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.92444	56.8	-	LEXN01	13	5961	5683	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280304	GCA_001032195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/195/GCA_001032195.1_Kleb_pneu_CHS163_V1	-	CHS163
Enterococcus faecalis	1351	PRJNA272367	272367	Terrabacteria group	Firmicutes	2.91974	37.4	-	JXMK01	104	2981	2860	4/21/17	4/24/17	Contig	"Nanshan Hospital of Guangdong Medical College, Shenzhen, China;"	SAMN03280994	GCA_002105335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/335/GCA_002105335.1_ASM210533v1	-	ZHOU_T10_3
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14191	52.4	-	CHZM01	77	2500	2184	4/21/15	4/11/17	Scaffold	SC	SAMEA1690338	GCA_001354695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/695/GCA_001354695.1_8727_8_6	-	GCGS102
Enterococcus faecium	1352	PRJNA278440	278440	Terrabacteria group	Firmicutes	2.59755	38.1	-	MVGO01	1	2677	2474	2/23/17	2/25/17	Contig	University of Sao Paulo	SAMN06330392	GCA_002005995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/995/GCA_002005995.1_ASM200599v1	-	LIM1546
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.75422	67.7	-	CSRX01	805	3803	3086	3/22/15	3/26/17	Scaffold	SC	SAMEA751405	GCA_001203235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/235/GCA_001203235.1_5476_5_5	-	B040
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66041	31.4	-	FBIC01	26	1718	1626	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683278	GCA_001492435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/435/GCA_001492435.1_EC3361	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.85348	55	-	FKDM01	48	4801	4557	4/6/16	3/28/17	Scaffold	SC	SAMEA2273150	GCA_900076955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/955/GCA_900076955.1_12045_4_27	-	e319
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.08991	64.2	-	FVSZ01	45	5090	4943	3/10/17	3/18/17	Contig	SC	SAMEA2071616	GCA_900138835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/835/GCA_900138835.1_10208_3_50	-	475
Pseudomonas sp. NFACC39-1	1566195	PRJEB16934	351104	Proteobacteria	Gammaproteobacteria	6.06262	60.4	-	FODL01	38	5437	5276	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159293	GCA_900110355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/355/GCA_900110355.1_IMG-taxon_2599185300_annotated_assembly	-	NFACC39-1
Streptomyces sp. SS	260742	PRJNA159633	159633	Terrabacteria group	Actinobacteria	8.11975	72.4	-	AKXV01	69	-	-	10/3/12	5/12/16	Scaffold	"Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences and Peking Union Medical College"	SAMN02469976	GCA_000302615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/615/GCA_000302615.1_ASM30261v1	23209237	SS
Streptomyces sp. KhCrAH-340	1157629	PRJNA169735	169735	Terrabacteria group	Actinobacteria	8.14343	71.9	-	ARDX01	66	-	-	4/19/13	12/12/13	Scaffold	DOE Joint Genome Institute	SAMN02441036	GCA_000373445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/445/GCA_000373445.1_ASM37344v1	-	KhCrAH-340
Pseudomonas sp. Snoq117.2	1500302	PRJEB16904	351060	Proteobacteria	Gammaproteobacteria	5.54349	64.8	-	FOED01	49	5192	5006	10/29/16	7/29/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02787149	GCA_900110545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/545/GCA_900110545.1_IMG-taxon_2609459739_annotated_assembly	-	Snoq117.2
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.01336	64.1	-	FVTB01	43	5075	4900	3/10/17	3/18/17	Contig	SC	SAMEA2070906	GCA_900138845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/845/GCA_900138845.1_10208_3_51	-	476
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.27256	55	-	FKDO01	52	5179	4942	4/6/16	3/28/17	Scaffold	SC	SAMEA2273151	GCA_900076965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/965/GCA_900076965.1_12045_4_28	-	e320
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.64005	31.4	-	FBMS01	19	1696	1604	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683394	GCA_001492455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/455/GCA_001492455.1_H140420240	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.82457	67.9	-	CSRE01	387	3726	3281	3/22/15	3/26/17	Scaffold	SC	SAMEA751511	GCA_001203935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/935/GCA_001203935.1_5476_6_9	-	B018
Enterococcus faecium	1352	PRJNA278440	278440	Terrabacteria group	Firmicutes	2.66891	38	-	MVGP01	1	2710	2495	2/23/17	2/25/17	Contig	University of Sao Paulo	SAMN06330393	GCA_002006005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/005/GCA_002006005.1_ASM200600v1	-	LIM1547
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14325	52.4	-	CIFX01	79	2512	2183	4/21/15	4/11/17	Scaffold	SC	SAMEA1690340	GCA_001354715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/715/GCA_001354715.1_8289_2_47	-	GCGS047
Enterococcus faecalis	1351	PRJNA272366	272366	Terrabacteria group	Firmicutes	2.90741	37.4	-	JXML01	113	2963	2847	4/21/17	4/24/17	Contig	"Nanshan Hospital of Guangdong Medical College, Shenzhen, China;"	SAMN03280995	GCA_002105365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/365/GCA_002105365.1_ASM210536v1	-	ZHOU_T60_1
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.33032	57.4	-	LEXM01	4	5233	5017	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280303	GCA_001032205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/205/GCA_001032205.1_Kleb_pneu_CHS162_V1	-	CHS162
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.24525	45.2	-	LRTG01	51	5125	4895	4/4/16	3/19/17	Contig	Health Canada	SAMN04441023	GCA_001609175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/175/GCA_001609175.1_ASM160917v1	-	A3EZ936
Clostridioides difficile	1496	PRJNA227078	227078	Terrabacteria group	Firmicutes	3.93856	28.4	-	JCKF01	93	3646	3590	9/25/17	9/25/17	Contig	Universidad de Zaragoza	SAMN02598825	GCA_002352505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/505/GCA_002352505.1_K40_RF17.1	28928035	RF17
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.22147	47.6	-	MWGK01	154	4069	3914	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263883	GCA_002098235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/235/GCA_002098235.1_ASM209823v1	28219321	CISM_302029
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.96226	68	-	LXBM01	101	7254	6695	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208737	GCA_001979745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/745/GCA_001979745.1_ASM197974v1	-	MSHR1685
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.72187	50.6	-	CWTL01	380	5596	4437	7/16/15	2/24/17	Scaffold	SC	SAMEA3345043	GCA_001253255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/255/GCA_001253255.1_H14126044301	-	44301ss_1
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.48695	38.3	-	FJLX01	39	3185	3055	2/20/16	3/27/17	Contig	SC	SAMEA2078034	GCA_900063935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/935/GCA_900063935.1_10625_3_85	-	2532STDY5467654
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.06317	41.1	-	FIQW01	22	2080	1964	2/10/16	3/19/17	Contig	SC	SAMEA1566127	GCA_900051285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/285/GCA_900051285.1_8525_5_61	-	SS87
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.03432	35.1	-	LBKT01	21	2079	1964	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435023	GCA_001018215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/215/GCA_001018215.1_ASM101821v1	25946017	DE-PW-435
Acinetobacter baumannii 1039621	1310592	PRJNA194668	194668	Proteobacteria	Gammaproteobacteria	3.97993	39	-	JEYU02	75	3857	3606	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02371023	GCA_000580435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/435/GCA_000580435.2_ASM58043v2	-	1039621
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.81373	66	-	JTWM01	236	6566	6251	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105497	GCA_000795955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/955/GCA_000795955.1_AZPAE14720	25367914	AZPAE14720
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05405	52.1	-	CMXY01	167	2319	2060	3/22/15	3/17/17	Scaffold	SC	SAMEA1031720	GCA_001139505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/505/GCA_001139505.1_6714_2_21	-	NM1976
Helicobacter pylori wls-5-10	1460428	PRJNA237695	237695	Proteobacteria	delta/epsilon subdivisions	1.63279	38.7	-	JDVP01	71	1616	1466	3/17/14	3/24/17	Contig	Academy of Military Medical Sciences	SAMN02639409	GCA_000591175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/175/GCA_000591175.1_wls-5-10	-	wls-5-10
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.06107	39.7	-	CPNH01	64	2278	2030	3/23/15	3/15/17	Contig	SC	SAMEA1483781	GCA_001092905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/905/GCA_001092905.1_8016_3_82	-	PN2
Escherichia coli MS 69-1	749531	PRJNA47213	47213	Proteobacteria	Gammaproteobacteria	5.22075	50.3	-	ADTP01	150	5350	4975	5/21/10	2/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189184	GCA_000164315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/315/GCA_000164315.1_ASM16431v1	-	MS 69-1
Mycobacterium tuberculosis TKK_05SA_0043	1448546	PRJNA235551	235551	Terrabacteria group	Actinobacteria	4.39947	65.6	-	JJVK01	1	4278	4112	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586041	GCA_000653655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/655/GCA_000653655.1_Myco_tube_TKK_05SA_0043_V1	-	TKK_05SA_0043
Bacillus cereus	1396	PRJEB20065	387332	Terrabacteria group	Firmicutes	6.1705	34.8	-	FWZH01	137	6852	6416	5/20/17	5/24/17	Scaffold	INSTITUT PASTEUR	SAMEA103956290	GCA_900176975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/975/GCA_900176975.1_Bcereus.16-00183	-	16-00183
Listeria monocytogenes SHL005	1302625	PRJNA192200	192200	Terrabacteria group	Firmicutes	2.87629	37.9	-	APIE01	17	2908	2831	12/15/14	2/26/17	Contig	"University of Maryland, College Park"	SAMN03265951	GCA_000801385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/385/GCA_000801385.1_L_monocytogenes_SHL005_v1.0	-	SHL005
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.6083	30.4	-	CUJB01	13	1674	1585	3/31/15	3/18/17	Contig	SC	SAMEA1010564	GCA_001233905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/905/GCA_001233905.1_7038_3_44	-	OXC6294
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20090419	1412517	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007296.1/CP007296.2	-	1	4706	4444	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384238	GCA_000625355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/355/GCA_000625355.2_ASM62535v2	24786953	SA20090419
Staphylococcus aureus DAR5897	1409753	PRJNA224171	224171	Terrabacteria group	Firmicutes	2.90015	32.9	-	JBTB01	7	3036	2857	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02383538	GCA_000525285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/285/GCA_000525285.1_Stap_aure_DAR5897_V1	-	DAR5897
Staphylococcus aureus DAR5896	1409754	PRJNA224172	224172	Terrabacteria group	Firmicutes	2.86704	32.8	-	JBTC01	7	3022	2848	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02383539	GCA_000525305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/305/GCA_000525305.1_Stap_aure_DAR5896_V1	-	DAR5896
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20090435	1412513	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007297.2/CP007297.2	-	1	4708	4447	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384234	GCA_000625375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/375/GCA_000625375.2_ASM62537v2	24786953	SA20090435
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.6577	30.4	-	CUIA01	16	1730	1640	3/31/15	3/18/17	Contig	SC	SAMEA1010356	GCA_001233965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/965/GCA_001233965.1_7038_3_2	-	OXC6251
Listeria monocytogenes SHL002	1302623	PRJNA192432	192432	Terrabacteria group	Firmicutes	3.11573	37.9	-	APIC01	22	3182	3061	12/15/14	2/26/17	Contig	"University of Maryland, College Park"	SAMN03265957	GCA_000801395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/395/GCA_000801395.1_L_monocytogenes_SHL002_v1.0	-	SHL002
Bacillus cereus	1396	PRJEB20065	387332	Terrabacteria group	Firmicutes	5.34605	35.2	-	FWZA01	67	5790	5457	5/20/17	5/24/17	Scaffold	INSTITUT PASTEUR	SAMEA103956296	GCA_900176985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/985/GCA_900176985.1_Bcereus.16-00193	-	16-00193
Mycobacterium tuberculosis TKK_05SA_0044	1448547	PRJNA235552	235552	Terrabacteria group	Actinobacteria	4.42234	65.6	-	JJVJ01	71	4335	4134	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586042	GCA_000653675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/675/GCA_000653675.1_Myco_tube_TKK_05SA_0044_V1	-	TKK_05SA_0044
Escherichia coli MS 187-1	749547	PRJNA47269	47269	Proteobacteria	Gammaproteobacteria	4.40316	50.8	-	ADTQ01	107	4465	4191	5/21/10	2/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189176	GCA_000164335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/335/GCA_000164335.1_ASM16433v1	-	MS 187-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.10993	39.6	-	CNNV02	142	2310	2091	3/23/15	3/11/17	Contig	SC	SAMEA1032541	GCA_001092965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/965/GCA_001092965.2_6925_1_66	-	R34-3048
Helicobacter pylori wls-5-11	1460429	PRJNA237696	237696	Proteobacteria	delta/epsilon subdivisions	1.56962	38.8	-	JDVO01	71	1566	1408	3/17/14	3/24/17	Contig	Academy of Military Medical Sciences	SAMN02639410	GCA_000591195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/195/GCA_000591195.1_wls-5-11	-	wls-5-11
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05212	52.1	-	CMZG01	183	2310	2059	3/23/15	3/17/17	Scaffold	SC	SAMEA1031635	GCA_001145125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/125/GCA_001145125.1_6714_3_21	-	NM2382
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.08121	65.8	-	JTWY01	215	6881	6540	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105485	GCA_000796025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/025/GCA_000796025.1_AZPAE14707	25367914	AZPAE14707
Acinetobacter baumannii 1032241	1310571	PRJNA194647	194647	Proteobacteria	Gammaproteobacteria	4.03091	39.1	-	JEYS01	202	3951	3711	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02371021	GCA_000580455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/455/GCA_000580455.1_ASM58045v1	-	1032241
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.0415	35.3	-	LBKU01	19	2112	1982	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435024	GCA_001018225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/225/GCA_001018225.1_ASM101822v1	25946017	DE-PW-436
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.07531	41.3	-	FIGL01	11	2034	1920	2/10/16	3/19/17	Contig	SC	SAMEA1316704	GCA_900051565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/565/GCA_900051565.1_7114_5_33	-	LSS33
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.34906	38.3	-	FJCP01	17	3050	2946	2/20/16	3/27/17	Contig	SC	SAMEA2058472	GCA_900064175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/175/GCA_900064175.1_10771_1_73	-	2531STDY5467354
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.84713	50.7	-	CWUX01	394	5440	4629	7/16/15	2/24/17	Scaffold	SC	SAMEA3345064	GCA_001253335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/335/GCA_001253335.1_Sg_201312520_TCCCGA_L001	-	201312520_1
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.96436	68	-	LXBN01	130	7261	6696	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208738	GCA_001979755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/755/GCA_001979755.1_ASM197975v1	-	MSHR1688
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.06532	47.5	-	MWGM01	145	3853	3706	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263881	GCA_002098255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/255/GCA_002098255.1_ASM209825v1	28219321	CISM_300215
Clostridioides difficile	1496	PRJNA227079	227079	Terrabacteria group	Firmicutes	4.38795	28.5	-	JCKG01	196	4184	4136	9/25/17	9/25/17	Contig	Universidad de Zaragoza	SAMN02598824	GCA_002352515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/352/515/GCA_002352515.1_K40_RC10.1	28928035	RC10
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.17696	45.2	-	LPVK01	47	5046	4792	4/4/16	3/19/17	Contig	Health Canada	SAMN04358135	GCA_001609345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/345/GCA_001609345.1_ASM160934v1	-	C145
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.88273	56.9	-	LEXO01	6	5958	5682	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280305	GCA_001032225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/225/GCA_001032225.1_Kleb_pneu_CHS164_V1	-	CHS164
Enterococcus faecalis	1351	PRJNA359372	359372	Terrabacteria group	Firmicutes	2.74809	37.6	-	MSQI01	53	2754	2645	4/24/17	4/26/17	Contig	Inner Mongolia Agricultural University	SAMN06190458	GCA_002106875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/875/GCA_002106875.1_ASM210687v1	-	HS5152
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14475	52.4	-	CFMA01	71	2502	2183	3/15/15	4/11/17	Scaffold	SC	SAMEA1690354	GCA_001354755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/755/GCA_001354755.1_8727_8_8	-	GCGS104
Enterococcus faecium	1352	PRJNA374541	374541	Terrabacteria group	Firmicutes	2.98095	37.6	-	MVEB01	191	3104	2798	3/2/17	4/10/17	Contig	FSBSI Institute of the Experimental Medicine	SAMN06327204	GCA_002009635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/635/GCA_002009635.1_ASM200963v1	-	24-10
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.76252	67.6	-	CSNA01	518	3746	3101	3/23/15	3/26/17	Scaffold	SC	SAMEA1931802	GCA_001204435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/435/GCA_001204435.1_5463_6_5	-	B108
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75081	31.2	-	FBBR01	26	1840	1744	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683106	GCA_001492495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/495/GCA_001492495.1_EC5679	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.92505	55.4	-	FKDR01	60	4872	4617	4/6/16	3/28/17	Scaffold	SC	SAMEA2273153	GCA_900076975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/975/GCA_900076975.1_12045_4_30	-	e341
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.90723	64.2	-	FVTA01	19	4893	4753	3/10/17	3/18/17	Contig	SC	SAMEA2071617	GCA_900138855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/855/GCA_900138855.1_10208_3_53	-	478
Pseudomonas sp. NFACC02	1566250	PRJEB16994	351110	Proteobacteria	Gammaproteobacteria	6.19472	59.6	-	FOEO01	93	5538	5349	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159444	GCA_900110765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/765/GCA_900110765.1_IMG-taxon_2599185307_annotated_assembly	-	NFACC02
Streptomyces sp. KhCrAH-244	1157633	PRJNA169741	169741	Terrabacteria group	Actinobacteria	8.20121	71.8	-	AREA01	98	-	-	4/19/13	12/12/13	Scaffold	DOE Joint Genome Institute	SAMN02441717	GCA_000373505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/373/505/GCA_000373505.1_ASM37350v1	-	KhCrAH-244
Streptomyces sp. GXT6	711393	PRJNA178392	178392	Terrabacteria group	Actinobacteria	7.27183	72.5	-	AYRX01	37	-	-	12/2/13	12/30/13	Scaffold	"State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, Guangxi University"	SAMN02399968	GCA_000500635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/635/GCA_000500635.1_Streptomyces_sp._GXT6_version_1	-	GXT6
Pseudomonas sp. NFPP19	1566225	PRJEB16966	351064	Proteobacteria	Gammaproteobacteria	6.88317	63.4	-	FOEY01	27	6250	6111	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159354	GCA_900110785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/785/GCA_900110785.1_IMG-taxon_2599185182_annotated_assembly	-	NFPP19
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23009	64.2	-	FSLZ01	43	5242	5087	12/14/16	3/21/17	Contig	SC	SAMEA2071618	GCA_900138875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/875/GCA_900138875.1_10208_3_56	-	481
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.85265	55.4	-	FKDQ01	39	4766	4525	4/6/16	3/28/17	Scaffold	SC	SAMEA2273154	GCA_900076985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/985/GCA_900076985.1_12045_4_32	-	e351
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75007	31.2	-	FBCD01	22	1840	1740	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683113	GCA_001492515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/515/GCA_001492515.1_EC4709	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.72917	67.6	-	CSSH01	1000	3788	3005	3/23/15	3/26/17	Scaffold	SC	SAMEA751403	GCA_001204675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/675/GCA_001204675.1_5476_5_4	-	B037
Enterococcus faecium	1352	PRJNA278440	278440	Terrabacteria group	Firmicutes	2.57237	38.4	-	MXAS01	676	2634	2441	3/14/17	3/16/17	Contig	University of Sao Paulo	SAMN06555612	GCA_002027475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/475/GCA_002027475.1_ASM202747v1	-	LIM559
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.15004	52.4	-	CFMB01	72	2522	2197	3/15/15	4/11/17	Scaffold	SC	SAMEA1690361	GCA_001354795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/795/GCA_001354795.1_8289_2_39	-	GCGS039
Enterococcus faecalis	1351	PRJNA359372	359372	Terrabacteria group	Firmicutes	2.79482	37.6	-	MSQM01	94	2805	2684	4/24/17	4/26/17	Contig	Inner Mongolia Agricultural University	SAMN06190462	GCA_002106895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/895/GCA_002106895.1_ASM210689v1	-	NM31-3
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.90686	56.9	-	LEXP01	6	5941	5656	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280306	GCA_001032265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/265/GCA_001032265.1_Kleb_pneu_CHS165_V1	-	CHS165
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.2109	45.2	-	LPVA01	52	5099	4842	4/4/16	3/19/17	Contig	Health Canada	SAMN04358132	GCA_001609375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/375/GCA_001609375.1_ASM160937v1	-	C142
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.03833	47.5	-	MWGP01	108	3845	3697	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263878	GCA_002098295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/295/GCA_002098295.1_ASM209829v1	28219321	CISM_300043
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.27048	67.9	-	LXBO01	128	7549	6938	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208739	GCA_001979765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/765/GCA_001979765.1_ASM197976v1	-	MSHR2845
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.72077	50.7	-	CXFC01	367	5199	4544	7/17/15	2/24/17	Scaffold	SC	SAMEA954644	GCA_001253355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/355/GCA_001253355.1_6246_5_4	-	SS133628_2496121
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.4456	38.3	-	FJGI01	22	3152	3047	2/20/16	3/27/17	Contig	SC	SAMEA2077489	GCA_900064185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/185/GCA_900064185.1_10625_2_15	-	2532STDY5467488
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.11927	41.1	-	FIHV01	44	2164	2021	2/10/16	3/19/17	Contig	SC	SAMEA1316608	GCA_900051575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/575/GCA_900051575.1_7114_5_71	-	LSS71
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.14548	35.4	-	LBKW01	35	2250	2073	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435026	GCA_001018245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/245/GCA_001018245.1_ASM101824v1	25946017	DK-PW-024
Acinetobacter baumannii 17534	1310556	PRJNA194632	194632	Proteobacteria	Gammaproteobacteria	4.1612	38.8	-	JEYQ01	235	4219	3930	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02371039	GCA_000580475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/475/GCA_000580475.1_ASM58047v1	-	17534
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.92138	66.1	-	JTWZ01	149	6710	6441	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105484	GCA_000796165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/165/GCA_000796165.1_AZPAE14706	25367914	AZPAE14706
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05185	52.1	-	CMYF01	146	2303	2054	3/23/15	3/21/17	Scaffold	SC	SAMEA1031649	GCA_001147245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/245/GCA_001147245.1_6714_2_22	-	NM2008
Helicobacter pylori wls-5-16	1460433	PRJNA237700	237700	Proteobacteria	delta/epsilon subdivisions	1.60263	38.9	-	JDVK01	124	1596	1427	3/17/14	3/24/17	Contig	Academy of Military Medical Sciences	SAMN02639414	GCA_000591215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/215/GCA_000591215.1_wls-5-16	-	wls-5-16
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.10021	39.5	-	COBQ02	160	2264	2063	3/23/15	3/5/17	Contig	SC	SAMEA1463232	GCA_001093005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/005/GCA_001093005.2_7622_2_8	-	BR1022-2
Escherichia coli MS 21-1	749527	PRJNA47205	47205	Proteobacteria	Gammaproteobacteria	5.30899	50.3	-	ADTR01	206	5623	5214	5/21/10	2/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189180	GCA_000164355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/355/GCA_000164355.1_ASM16435v1	-	MS 21-1
Mycobacterium tuberculosis TKK_05SA_0046	1448548	PRJNA235553	235553	Terrabacteria group	Actinobacteria	4.38789	65.6	-	JJVI01	84	4336	4117	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586043	GCA_000653695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/695/GCA_000653695.1_Myco_tube_TKK_05SA_0046_V1	-	TKK_05SA_0046
Bacillus cereus	1396	PRJEB20065	387332	Terrabacteria group	Firmicutes	5.57357	35.1	-	FWYY01	80	6002	5681	5/20/17	5/24/17	Scaffold	INSTITUT PASTEUR	SAMEA103956293	GCA_900176995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/995/GCA_900176995.1_Bcereus.16-00187	-	16-00187
Listeria monocytogenes SHL001	1302622	PRJNA192431	192431	Terrabacteria group	Firmicutes	2.94719	37.9	-	APIB01	31	3001	2923	12/15/14	2/27/17	Contig	"University of Maryland, College Park"	SAMN03265950	GCA_000801405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/405/GCA_000801405.1_L_monocytogenes_SHL001_v1.0	-	SHL001
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.62398	30.4	-	CUUM01	13	1698	1567	3/31/15	3/18/17	Contig	SC	SAMEA1400950	GCA_001233985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/985/GCA_001233985.1_7213_3_56	-	OXC6599
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20090530	1412585	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007298.2/CP007298.2	-	1	4709	4450	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384306	GCA_000625395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/395/GCA_000625395.2_ASM62539v2	24786953	EC20090530
Staphylococcus aureus DAR5895	1409755	PRJNA224173	224173	Terrabacteria group	Firmicutes	2.93863	32.9	-	JBTD01	21	3088	2896	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02383540	GCA_000525325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/325/GCA_000525325.1_Stap_aure_DAR5895_V1	-	DAR5895
Staphylococcus aureus DAR5894	1409756	PRJNA224174	224174	Terrabacteria group	Firmicutes	2.98589	33	-	JBTE01	18	3148	2953	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02383541	GCA_000525345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/345/GCA_000525345.1_Stap_aure_DAR5894_V1	-	DAR5894
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20100088	1412598	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007355.2/CP007355.2	-	1	4709	4449	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384319	GCA_000625415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/415/GCA_000625415.2_ASM62541v2	24786953	EC20100088
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.73601	30.3	-	CUIT01	30	1823	1679	3/31/15	3/18/17	Contig	SC	SAMEA1010276	GCA_001234065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/065/GCA_001234065.1_7038_3_38	-	OXC6288
Listeria monocytogenes SHL006	1302626	PRJNA192202	192202	Terrabacteria group	Firmicutes	2.93359	37.9	-	APIF01	29	2983	2921	12/15/14	2/27/17	Contig	"University of Maryland, College Park"	SAMN03265952	GCA_000801455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/455/GCA_000801455.1_L_monocytogenes_SHL006_v1.0	-	SHL006
Bacillus cereus	1396	PRJEB20065	387332	Terrabacteria group	Firmicutes	5.69545	35.3	-	FWZG01	124	6044	5685	5/20/17	6/15/17	Scaffold	INSTITUT PASTEUR	SAMEA103956299	GCA_900177005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/005/GCA_900177005.1_Bcereus.16-00174	-	16-00177
Mycobacterium tuberculosis TKK_05SA_0047	1448549	PRJNA235554	235554	Terrabacteria group	Actinobacteria	4.38987	65.6	-	JJVH01	81	4331	4110	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586044	GCA_000653715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/715/GCA_000653715.1_Myco_tube_TKK_05SA_0047_V1	-	TKK_05SA_0047
Escherichia coli MS 117-3	749539	PRJNA47231	47231	Proteobacteria	Gammaproteobacteria	5.03548	50.5	-	ADTS01	190	5287	4925	5/21/10	2/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189166	GCA_000164375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/375/GCA_000164375.1_ASM16437v1	-	MS 117-3
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06097	39.6	-	COFK02	146	2259	2052	3/23/15	3/5/17	Contig	SC	SAMEA1463051	GCA_001093045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/045/GCA_001093045.2_7622_5_83	-	ND6046
Helicobacter pylori wls-5-17	1460434	PRJNA237701	237701	Proteobacteria	delta/epsilon subdivisions	1.56421	38.8	-	JDVJ01	40	1560	1407	3/17/14	3/24/17	Contig	Academy of Military Medical Sciences	SAMN02639415	GCA_000591235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/235/GCA_000591235.1_wls-5-17	-	wls-5-17
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05606	52	-	CMYY01	185	2309	2050	3/23/15	3/21/17	Scaffold	SC	SAMEA1031691	GCA_001148025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/025/GCA_001148025.1_6714_3_16	-	NM2264
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.73222	66.1	-	JTYK01	90	6432	6235	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105447	GCA_000796225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/225/GCA_000796225.1_AZPAE14422	25367914	AZPAE14422
Acinetobacter baumannii 110912	1310648	PRJNA194724	194724	Proteobacteria	Gammaproteobacteria	3.9534	38.9	-	JEVZ02	5	3791	3607	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02380496	GCA_000580495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/495/GCA_000580495.2_ASM58049v2	-	110912
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.03132	35.2	-	LBKV01	22	2089	1985	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435025	GCA_001018255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/255/GCA_001018255.1_ASM101825v1	25946017	DK-PW-014
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.04763	41.1	-	FIKZ01	115	2099	1944	2/10/16	3/19/17	Contig	SC	SAMEA1316703	GCA_900051585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/585/GCA_900051585.1_7054_7_55	-	SS1064
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.66051	38.3	-	FJLI01	71	3349	3198	2/20/16	3/27/17	Contig	SC	SAMEA2078023	GCA_900064205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/205/GCA_900064205.1_10625_3_49	-	2532STDY5467618
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.4588	50.8	-	CWTV01	368	4965	4199	7/16/15	2/24/17	Scaffold	SC	SAMEA3345054	GCA_001253375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/375/GCA_001253375.1_H14132054201	-	54201ss_1
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.27062	67.9	-	LXBP01	131	7556	6938	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208741	GCA_001979805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/805/GCA_001979805.1_ASM197980v1	-	MSHR2849
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.03013	47.5	-	MWGQ01	130	3786	3679	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263877	GCA_002098305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/305/GCA_002098305.1_ASM209830v1	28219321	CISM_296
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.12121	28.5	-	CZWK01	366	3761	3643	3/31/16	5/31/17	Contig	UNIVERSITE LAVAL	SAMEA3663992	GCA_900007545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/545/GCA_900007545.1_ASM90000754v1	-	-
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.07828	45.3	-	LPVB01	30	4906	4676	4/4/16	3/19/17	Contig	Health Canada	SAMN04358133	GCA_001609395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/395/GCA_001609395.1_ASM160939v1	-	C143
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.92431	56.9	-	LEXQ01	12	6034	5712	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280307	GCA_001032275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/275/GCA_001032275.1_Kleb_pneu_CHS166_V1	-	CHS166
Enterococcus faecalis	1351	PRJNA359372	359372	Terrabacteria group	Firmicutes	3.07304	37.3	-	MSQH01	102	3212	3047	4/24/17	4/26/17	Contig	Inner Mongolia Agricultural University	SAMN06190457	GCA_002106905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/905/GCA_002106905.1_ASM210690v1	-	ELS8-4
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14419	52.4	-	CFIZ01	72	2498	2172	3/15/15	4/11/17	Scaffold	SC	SAMEA1690380	GCA_001354835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/835/GCA_001354835.1_8289_2_79	-	GCGS079
Enterococcus faecium	1352	PRJNA278440	278440	Terrabacteria group	Firmicutes	2.97535	37.8	-	MXAT01	391	3095	2901	3/14/17	3/16/17	Contig	University of Sao Paulo	SAMN06555613	GCA_002027505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/505/GCA_002027505.1_ASM202750v1	-	LIM695
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.74249	67.7	-	CSLX01	995	3795	3041	3/23/15	3/26/17	Scaffold	SC	SAMEA751345	GCA_001205255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/255/GCA_001205255.1_5476_3_4	-	B098
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65817	31.3	-	FBLY01	28	1711	1628	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683379	GCA_001492535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/535/GCA_001492535.1_H140200373	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.74353	55.5	-	FKDS01	43	4615	4408	4/6/16	3/28/17	Scaffold	SC	SAMEA2273155	GCA_900076995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/076/995/GCA_900076995.1_12045_4_33	-	e352
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.92498	64.2	-	FVTF01	14	4913	4789	3/10/17	3/18/17	Contig	SC	SAMEA2071619	GCA_900138895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/895/GCA_900138895.1_10208_3_59	-	484
Pseudomonas sp. NFR09	1566249	PRJEB17058	351171	Proteobacteria	Gammaproteobacteria	6.61117	60.7	-	FOIH01	27	5996	5786	10/29/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159512	GCA_900111535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/535/GCA_900111535.1_IMG-taxon_2599185179_annotated_assembly	-	NFR09
Streptomyces sp. KhCrAH-337	1305839	PRJNA195773	195773	Terrabacteria group	Actinobacteria	8.21972	71.8	-	AZVF01	79	-	-	1/3/14	2/7/14	Scaffold	DOE Joint Genome Institute	SAMN02597210	GCA_000514075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/075/GCA_000514075.1_ASM51407v1	-	KhCrAH-337
Streptomyces sp. KhCrAH-40	1305838	PRJNA195772	195772	Terrabacteria group	Actinobacteria	8.26658	71.8	-	AZVG01	77	-	-	1/3/14	2/7/14	Scaffold	DOE Joint Genome Institute	SAMN02597211	GCA_000514095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/514/095/GCA_000514095.1_ASM51409v1	-	KhCrAH-40
Pseudomonas sp. NFPP13	1566207	PRJEB17098	351696	Proteobacteria	Gammaproteobacteria	6.84169	63.5	-	FOJR01	22	6274	6138	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159320	GCA_900111855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/855/GCA_900111855.1_IMG-taxon_2599185164_annotated_assembly	-	NFPP13
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.90221	64.2	-	FVTD01	20	4937	4813	3/10/17	3/18/17	Contig	SC	SAMEA2070908	GCA_900138905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/905/GCA_900138905.1_10208_3_57	-	482
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.72101	56	-	FKDT01	13	4551	4379	4/6/16	3/28/17	Scaffold	SC	SAMEA2273477	GCA_900077005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/005/GCA_900077005.1_12045_5_56	-	e362
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	2.01517	31	-	FBQQ01	381	2146	1917	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683489	GCA_001492555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/555/GCA_001492555.1_H102240159	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.70518	67.5	-	CSSJ01	754	3734	2975	3/23/15	3/26/17	Scaffold	SC	SAMEA2035349	GCA_001205275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/275/GCA_001205275.1_5463_3_8	-	B178
Enterococcus faecium	1352	PRJNA278440	278440	Terrabacteria group	Firmicutes	2.88595	38	-	MXAU01	645	2978	2785	3/14/17	3/16/17	Contig	University of Sao Paulo	SAMN06555614	GCA_002027515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/515/GCA_002027515.1_ASM202751v1	-	LIM699
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14656	52.4	-	CHDV01	74	2504	2188	4/21/15	4/11/17	Scaffold	SC	SAMEA1690381	GCA_001354855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/855/GCA_001354855.1_8727_8_87	-	GCGS183
Enterococcus faecalis	1351	PRJNA359372	359372	Terrabacteria group	Firmicutes	2.74895	37.6	-	MSQJ01	39	2751	2645	4/24/17	4/26/17	Contig	Inner Mongolia Agricultural University	SAMN06190459	GCA_002106915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/915/GCA_002106915.1_ASM210691v1	-	HS5302
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.89244	56.9	-	LEXR01	8	5989	5708	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280308	GCA_001032285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/285/GCA_001032285.1_Kleb_pneu_CHS167_V1	-	CHS167
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.07876	45.3	-	LPVC01	34	4910	4675	4/4/16	3/19/17	Contig	Health Canada	SAMN04358134	GCA_001609415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/415/GCA_001609415.1_ASM160941v1	-	C144
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.37676	29.1	-	CZWV01	1683	3962	3716	3/31/16	4/10/17	Contig	UNIVERSITE LAVAL	SAMEA3663995	GCA_900007555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/555/GCA_900007555.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.0364	47.5	-	MWGN01	90	3854	3687	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263880	GCA_002098335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/335/GCA_002098335.1_ASM209833v1	28219321	CISM_300209
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.95056	68.1	-	LXBS01	484	7334	6544	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208744	GCA_001979815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/815/GCA_001979815.1_ASM197981v1	-	MSHR3107
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.76155	50.7	-	CWWF01	408	5381	4571	7/16/15	2/24/17	Scaffold	SC	SAMEA3345097	GCA_001253395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/395/GCA_001253395.1_Sg_201403963_CACTCA_L001	-	201403963_1
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54051	38.3	-	FJKJ01	57	3236	3087	2/20/16	3/27/17	Contig	SC	SAMEA2077762	GCA_900064315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/315/GCA_900064315.1_10625_3_30	-	2532STDY5467599
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.04431	41.1	-	FILN01	24	2051	1953	2/10/16	3/19/17	Contig	SC	SAMEA1316555	GCA_900051595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/595/GCA_900051595.1_7054_7_11	-	SS979
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.1268	35.3	-	LBKX01	37	2205	2070	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435027	GCA_001018295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/295/GCA_001018295.1_ASM101829v1	25946017	DK-PW-060
Acinetobacter baumannii 118362	1310618	PRJNA194694	194694	Proteobacteria	Gammaproteobacteria	4.44957	38.9	-	JEWB01	434	4357	3971	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02380498	GCA_000580515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/515/GCA_000580515.1_ASM58051v1	-	118362
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.86754	66	-	JTWL01	164	6600	6339	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105498	GCA_000796245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/245/GCA_000796245.1_AZPAE14721	25367914	AZPAE14721
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.0723	52.1	-	CNAB01	183	2333	2075	3/23/15	3/21/17	Scaffold	SC	SAMEA1031714	GCA_001151925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/925/GCA_001151925.1_6714_4_6	-	NM2524
Helicobacter pylori wls-5-4	1460436	PRJNA237682	237682	Proteobacteria	delta/epsilon subdivisions	1.61196	38.8	-	JDVV01	80	1598	1449	3/17/14	3/24/17	Contig	Academy of Military Medical Sciences	SAMN02639404	GCA_000591255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/255/GCA_000591255.1_wls-5-4	-	wls-5-4
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06517	39.5	-	CNTB02	210	2225	2013	3/23/15	3/5/17	Contig	SC	SAMEA1032745	GCA_001093065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/065/GCA_001093065.2_6999_3_6	-	15445
Escherichia coli MS 110-3	749536	PRJNA47225	47225	Proteobacteria	Gammaproteobacteria	5.07184	50.5	-	ADTW01	80	5252	4887	5/21/10	2/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189163	GCA_000164415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/415/GCA_000164415.1_ASM16441v1	-	MS 110-3
Mycobacterium tuberculosis TKK_05SA_0048	1448550	PRJNA235555	235555	Terrabacteria group	Actinobacteria	4.39985	65.6	-	JJVG01	71	4317	4116	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586045	GCA_000653735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/735/GCA_000653735.1_Myco_tube_TKK_05SA_0048_V1	-	TKK_05SA_0048
Bacillus cereus	1396	PRJEB20065	387332	Terrabacteria group	Firmicutes	5.58244	35.1	-	FWZE01	87	5999	5677	5/20/17	5/24/17	Scaffold	INSTITUT PASTEUR	SAMEA103956294	GCA_900177025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/025/GCA_900177025.1_Bcereus.16-00188	-	16-00188
Listeria monocytogenes SHL007	1302627	PRJNA192203	192203	Terrabacteria group	Firmicutes	2.9774	37.9	-	APIG01	41	3050	2944	12/15/14	2/27/17	Contig	"University of Maryland, College Park"	SAMN03265959	GCA_000801475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/475/GCA_000801475.1_L_monocytogenes_SHL007_v1.0	-	SHL007
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.61023	30.4	-	CUKY01	14	1679	1582	3/31/15	3/18/17	Contig	SC	SAMEA1010603	GCA_001234085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/085/GCA_001234085.1_7038_3_89	-	OXC6339
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20100089	1412599	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007356.2/CP007356.2	-	1	4707	4447	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384320	GCA_000625435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/435/GCA_000625435.2_ASM62543v2	24786953	EC20100089
Staphylococcus aureus DAR5893	1409757	PRJNA224175	224175	Terrabacteria group	Firmicutes	2.92971	32.9	-	JBTF01	8	3090	2906	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02383542	GCA_000525365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/365/GCA_000525365.1_Stap_aure_DAR5893_V1	-	DAR5893
Staphylococcus aureus DAR5892	1409758	PRJNA224176	224176	Terrabacteria group	Firmicutes	2.94816	32.9	-	JBTG01	13	3101	2915	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02383543	GCA_000525385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/385/GCA_000525385.1_Stap_aure_DAR5892_V1	-	DAR5892
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120580	1412603	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68583	52.2	chromosome:NZ_CP007335.2/CP007335.2	-	1	4709	4451	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384324	GCA_000625455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/455/GCA_000625455.2_ASM62545v2	24786953	EC20120580
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.67548	30.3	-	CUIZ01	19	1768	1671	3/31/15	3/18/17	Contig	SC	SAMEA1010527	GCA_001234145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/145/GCA_001234145.1_7038_3_42	-	OXC6292
Listeria monocytogenes SHL008	1302628	PRJNA192204	192204	Terrabacteria group	Firmicutes	3.01333	37.9	-	APIH01	24	3041	2962	12/15/14	2/27/17	Contig	"University of Maryland, College Park"	SAMN03265958	GCA_000801485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/485/GCA_000801485.1_L_monocytogenes_SHL008_v1.0	-	SHL008
Buchnera aphidicola str. Sg (Schizaphis graminum)	198804	PRJNA312	312	Proteobacteria	Gammaproteobacteria	0.641454	25.3	chromosome:NC_004061.1/AE013218.1	-	1	625	560	6/10/02	3/14/17	Complete Genome	Uppsala Univ.	SAMN02604269	GCA_000007365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/007/365/GCA_000007365.1_ASM736v1	12089438	Sg
Mycobacterium tuberculosis TKK_05SA_0050	1448551	PRJNA235556	235556	Terrabacteria group	Actinobacteria	4.41424	65.6	-	JJVF01	82	4330	4105	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586046	GCA_000653755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/755/GCA_000653755.1_Myco_tube_TKK_05SA_0050_V1	-	TKK_05SA_0050
Escherichia coli MS 153-1	749541	PRJNA47257	47257	Proteobacteria	Gammaproteobacteria	5.11686	50.4	-	ADTX01	155	5328	4915	5/21/10	2/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189171	GCA_000164435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/435/GCA_000164435.1_ASM16443v1	-	MS 153-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.10592	39.7	-	CNYP02	211	2289	2074	3/23/15	3/5/17	Contig	SC	SAMEA1463170	GCA_001093125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/125/GCA_001093125.2_7553_4_37	-	NP7028
Helicobacter pylori wls-5-5	1460423	PRJNA237681	237681	Proteobacteria	delta/epsilon subdivisions	1.56507	38.8	-	JDVU01	88	1560	1395	3/17/14	3/24/17	Contig	Academy of Military Medical Sciences	SAMN02639403	GCA_000591275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/275/GCA_000591275.1_wls-5-5	-	wls-5-5
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.0531	52.1	-	CMXQ01	143	2307	2050	3/23/15	3/21/17	Scaffold	SC	SAMEA1031707	GCA_001155085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/085/GCA_001155085.1_6714_2_11	-	NM1895
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.71475	66	-	JTYJ01	99	6469	6262	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105448	GCA_000796255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/255/GCA_000796255.1_AZPAE14437	25367914	AZPAE14437
Acinetobacter baumannii 1202252	1310624	PRJNA194700	194700	Proteobacteria	Gammaproteobacteria	4.1187	39	-	JEWC01	189	4085	3792	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02380499	GCA_000580535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/535/GCA_000580535.1_ASM58053v1	-	1202252
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.07663	35.5	-	LBKZ01	40	2128	1991	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435008	GCA_001018315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/315/GCA_001018315.1_ASM101831v1	25946017	BE-PW-095
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.0254	41.2	-	FIGI01	22	2040	1922	2/10/16	3/19/17	Contig	SC	SAMEA1316678	GCA_900051935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/935/GCA_900051935.1_7114_5_35	-	LSS35
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54047	38.3	-	FJKL01	60	3239	3091	2/20/16	3/27/17	Contig	SC	SAMEA2077797	GCA_900064325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/325/GCA_900064325.1_10625_3_37	-	2532STDY5467606
Shigella sonnei	624	PRJEB2460	204320	Proteobacteria	Gammaproteobacteria	4.68705	50.5	-	CXFH01	397	5115	4502	7/16/15	2/24/17	Scaffold	SC	SAMEA1027678	GCA_001253415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/415/GCA_001253415.1_6350_1_11	-	sh07-1910
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.84807	68	-	LXBR01	105	7128	6580	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208743	GCA_001979835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/835/GCA_001979835.1_ASM197983v1	-	MSHR3106
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.03905	47.5	-	MWGO01	100	3862	3689	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263879	GCA_002098345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/345/GCA_002098345.1_ASM209834v1	28219321	CISM_300208
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.18022	28.7	-	CZWP01	640	3781	3646	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664002	GCA_900007575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/575/GCA_900007575.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.21218	45.2	-	LPVL01	51	5072	4841	4/4/16	3/19/17	Contig	Health Canada	SAMN04358136	GCA_001609445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/445/GCA_001609445.1_ASM160944v1	-	C146
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.88493	56.9	-	LEXS01	8	5961	5702	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280309	GCA_001032305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/305/GCA_001032305.1_Kleb_pneu_CHS168_V1	-	CHS168
Enterococcus faecalis	1351	PRJNA359372	359372	Terrabacteria group	Firmicutes	2.83849	37.5	-	MSQK01	82	2966	2806	4/24/17	4/26/17	Contig	Inner Mongolia Agricultural University	SAMN06190460	GCA_002106955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/955/GCA_002106955.1_ASM210695v1	-	MGA44-7
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14472	52.4	-	CGCO01	77	2501	2181	3/15/15	4/11/17	Scaffold	SC	SAMEA1690386	GCA_001354875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/875/GCA_001354875.1_8727_8_41	-	GCGS137
Enterococcus faecium	1352	PRJNA342049	342049	Terrabacteria group	Firmicutes	2.7836	37.9	-	MJDX01	111	2905	2668	4/3/17	4/5/17	Contig	Lethbridge Research Centre	SAMN05735021	GCA_002077585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/585/GCA_002077585.1_ASM207758v1	28270110	F1129F 09
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.68517	67.3	-	CSNE01	805	3710	2894	3/23/15	3/26/17	Scaffold	SC	SAMEA1931801	GCA_001205335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/335/GCA_001205335.1_5463_6_10	-	B033
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65995	31.4	-	FAXQ01	23	1722	1629	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683013	GCA_001492575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/575/GCA_001492575.1_EC4214	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.71591	55.1	-	FKDU01	52	4603	4356	4/6/16	3/28/17	Scaffold	SC	SAMEA2273156	GCA_900077015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/015/GCA_900077015.1_12045_4_34	-	e377
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.07916	64.2	-	FVTE01	17	5153	4993	3/10/17	3/18/17	Contig	SC	SAMEA2069152	GCA_900138915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/915/GCA_900138915.1_10208_3_58	-	483
Pseudomonas sp. NFIX10	1566236	PRJEB17104	351344	Proteobacteria	Gammaproteobacteria	6.43125	61	-	FOKH01	67	5842	5577	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159488	GCA_900111955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/111/955/GCA_900111955.1_IMG-taxon_2600254930_annotated_assembly	-	NFIX10
Streptomyces sp. NRRL B-24501	1463834	PRJNA238534	238534	Terrabacteria group	Actinobacteria	11.5654	68	-	JOAH01	448	-	-	7/1/14	7/1/14	Scaffold	University of Illinois	SAMN02645362	GCA_000716085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/085/GCA_000716085.1_ASM71608v1	-	NRRL B-24501
Streptomyces sp. NRRL S-50	1463912	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.79884	69.7	-	JOAV01	500	-	-	7/1/14	7/1/14	Scaffold	University of Illinois	SAMN02645376	GCA_000716195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/195/GCA_000716195.1_ASM71619v1	-	NRRL S-50
Pseudomonas sp. NFPP24	1566228	PRJEB17099	351695	Proteobacteria	Gammaproteobacteria	6.29758	61	-	FOKD01	31	5763	5579	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159485	GCA_900112095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/095/GCA_900112095.1_IMG-taxon_2599185191_annotated_assembly	-	NFPP24
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.22506	64.2	-	FSMA01	41	5229	5075	12/14/16	3/21/17	Contig	SC	SAMEA1969770	GCA_900138925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/925/GCA_900138925.1_10208_3_62	-	487
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.84053	55.4	-	FKDV01	59	4774	4548	4/6/16	3/28/17	Scaffold	SC	SAMEA2273157	GCA_900077025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/025/GCA_900077025.1_12045_4_35	-	e380
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.70237	31.3	-	FBPU01	31	1778	1691	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683476	GCA_001492635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/635/GCA_001492635.1_H084040382b	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.76927	67.7	-	CSNU01	501	3726	3155	3/23/15	3/26/17	Scaffold	SC	SAMEA751522	GCA_001205915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/915/GCA_001205915.1_5515_6_9	-	B132
Enterococcus faecium	1352	PRJNA342049	342049	Terrabacteria group	Firmicutes	2.71165	38.3	-	MJDY01	182	2807	2513	4/3/17	4/5/17	Contig	Lethbridge Research Centre	SAMN05735022	GCA_002077625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/625/GCA_002077625.1_ASM207762v1	28270110	F1129D 110
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14539	52.4	-	CIFR01	73	2510	2191	4/21/15	4/11/17	Scaffold	SC	SAMEA1690418	GCA_001354975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/975/GCA_001354975.1_8289_2_48	-	GCGS048
Enterococcus faecalis	1351	PRJNA359372	359372	Terrabacteria group	Firmicutes	2.76399	37.6	-	MSQL01	114	2773	2609	4/24/17	4/26/17	Contig	Inner Mongolia Agricultural University	SAMN06190461	GCA_002106975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/975/GCA_002106975.1_ASM210697v1	-	NM15-4
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.86879	56.9	-	LEXT01	8	5937	5665	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280310	GCA_001032345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/345/GCA_001032345.1_Kleb_pneu_CHS169_V1	-	CHS169
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.07877	45.3	-	LPVM01	36	4902	4672	4/4/16	3/19/17	Contig	Health Canada	SAMN04358199	GCA_001609495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/495/GCA_001609495.1_ASM160949v1	-	C147
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.24261	28.9	-	CZWZ01	1252	3875	3652	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3663994	GCA_900007585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/585/GCA_900007585.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.19585	47.6	-	MWGR01	105	4057	3894	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263876	GCA_002098355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/355/GCA_002098355.1_ASM209835v1	28219321	CISM_196
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.9719	68	-	LXBQ01	111	7266	6693	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208742	GCA_001979865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/865/GCA_001979865.1_ASM197986v1	-	MSHR3030
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.42446	50.8	-	CWTG01	356	4887	4163	7/16/15	2/24/17	Scaffold	SC	SAMEA3345027	GCA_001253475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/475/GCA_001253475.1_H14112033401	-	33401ss_1
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.52089	38.4	-	FJLY01	39	3228	3095	2/20/16	3/27/17	Contig	SC	SAMEA2077989	GCA_900064335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/335/GCA_900064335.1_10625_3_75	-	2532STDY5467644
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	1.98004	41.3	-	FIKV01	26	1995	1895	2/10/16	3/19/17	Contig	SC	SAMEA1316696	GCA_900051955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/955/GCA_900051955.1_7054_7_53	-	SS1058
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.02756	35.2	-	LBKY01	23	2091	1970	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435006	GCA_001018325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/325/GCA_001018325.1_ASM101832v1	25946017	BE-PW-078
Acinetobacter baumannii 1294217	1310620	PRJNA194696	194696	Proteobacteria	Gammaproteobacteria	4.15231	39.2	-	JEWF01	140	4149	3840	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02380502	GCA_000580555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/555/GCA_000580555.1_ASM58055v1	-	1294217
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.81046	65.9	-	JTYI01	103	6599	6379	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105449	GCA_000796285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/285/GCA_000796285.1_AZPAE14441	25367914	AZPAE14441
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.03112	52.1	-	CMZX01	237	2274	2023	3/23/15	3/17/17	Scaffold	SC	SAMEA1031668	GCA_001158305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/305/GCA_001158305.1_6714_4_5	-	NM2441
Helicobacter pylori wls-5-6	1460437	PRJNA237683	237683	Proteobacteria	delta/epsilon subdivisions	1.53541	38.8	-	JDVT01	154	1589	1370	3/17/14	3/24/17	Contig	Academy of Military Medical Sciences	SAMN02639405	GCA_000591295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/295/GCA_000591295.1_wls-5-6	-	wls-5-6
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.01247	39.6	-	COFW02	112	2179	1983	3/23/15	3/11/17	Contig	SC	SAMEA1463049	GCA_001093145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/145/GCA_001093145.2_7622_5_94	-	ND6103
Escherichia coli MS 78-1	749532	PRJNA47217	47217	Proteobacteria	Gammaproteobacteria	4.77747	50.6	-	ADTY01	127	4926	4609	5/21/10	2/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189185	GCA_000164455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/455/GCA_000164455.1_ASM16445v1	-	MS 78-1
Mycobacterium tuberculosis TKK_05SA_0052	1448552	PRJNA235557	235557	Terrabacteria group	Actinobacteria	4.3907	65.6	-	JJVE01	84	4324	4113	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586047	GCA_000653775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/775/GCA_000653775.1_Myco_tube_TKK_05SA_0052_V1	-	TKK_05SA_0052
Bacillus cereus	1396	PRJNA378615	378615	Terrabacteria group	Firmicutes	4.99789	35.3	chromosome:CP020804.1	-	1	5194	5107	5/4/17	8/28/17	Chromosome	Universidade Federal de Pelotas	SAMN06554796	GCA_002117855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/117/855/GCA_002117855.1_ASM211785v1	-	29
Listeria monocytogenes SHL010	1302630	PRJNA192207	192207	Terrabacteria group	Firmicutes	3.0817	37.9	-	APIJ01	52	3157	3046	12/15/14	2/27/17	Contig	"University of Maryland, College Park"	SAMN03265955	GCA_000801515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/515/GCA_000801515.1_L_monocytogenes_SHL010_v1.0	-	SHL010
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.73152	30.3	-	CUUX01	16	1833	1702	3/31/15	3/18/17	Contig	SC	SAMEA1401189	GCA_001234165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/165/GCA_001234165.1_7213_3_68	-	OXC6612
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120581	1412604	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007336.2/CP007336.2	-	1	4708	4449	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384325	GCA_000625475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/475/GCA_000625475.2_ASM62547v2	24786953	EC20120581
Staphylococcus aureus DAR5891	1409759	PRJNA224177	224177	Terrabacteria group	Firmicutes	2.91649	32.9	-	JBTH01	15	3060	2858	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02383544	GCA_000525405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/405/GCA_000525405.1_Stap_aure_DAR5891_V1	-	DAR5891
Staphylococcus aureus DAR5882	1409760	PRJNA224178	224178	Terrabacteria group	Firmicutes	2.93635	32.9	-	JBTI01	15	3078	2898	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02383545	GCA_000525425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/425/GCA_000525425.1_Stap_aure_DAR5882_V1	-	DAR5882
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120590	1412605	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007337.2/CP007337.2	-	1	4708	4446	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384326	GCA_000625495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/495/GCA_000625495.2_ASM62549v2	24786953	EC20120590
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.65875	30.4	-	CUIQ01	18	1729	1631	3/31/15	3/18/17	Contig	SC	SAMEA1010622	GCA_001234225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/225/GCA_001234225.1_7038_3_35	-	OXC6285
Listeria monocytogenes SHL009	1302629	PRJNA192206	192206	Terrabacteria group	Firmicutes	2.87083	37.9	-	APII01	30	2911	2838	12/15/14	2/26/17	Contig	"University of Maryland, College Park"	SAMN03265953	GCA_000801525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/525/GCA_000801525.1_L_monocytogenes_SHL009_v1.0	-	SHL009
Bacillus cereus BDRD-ST26	526975	PRJNA29661	29661	Terrabacteria group	Firmicutes	5.56803	35.2499	chromosome:CM000724.1	ACMC01	1	11720	11556	4/30/09	11/19/13	Chromosome	Naval Medical Research Center	SAMN00727653	GCA_000161075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/075/GCA_000161075.1_ASM16107v1	22645259	BDRD-ST26
Mycobacterium tuberculosis TKK_05SA_0054	1448554	PRJNA235559	235559	Terrabacteria group	Actinobacteria	4.41171	65.6	-	JJVD01	75	4317	4119	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586049	GCA_000653795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/795/GCA_000653795.1_Myco_tube_TKK_05SA_0054_V1	-	TKK_05SA_0054
Escherichia coli MS 116-1	749538	PRJNA47229	47229	Proteobacteria	Gammaproteobacteria	4.86366	50.5	-	ADTZ01	141	4994	4656	5/21/10	2/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189165	GCA_000164475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/475/GCA_000164475.1_ASM16447v1	-	MS 116-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05724	39.6	-	CNZK02	172	2213	2021	3/23/15	3/11/17	Contig	SC	SAMEA1463281	GCA_001093165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/165/GCA_001093165.2_7553_5_68	-	PT8014
Helicobacter pylori wls-5-8	1460439	PRJNA237693	237693	Proteobacteria	delta/epsilon subdivisions	1.6183	38.7	-	JDVR01	98	1609	1438	3/17/14	3/24/17	Contig	Academy of Military Medical Sciences	SAMN02639407	GCA_000591315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/315/GCA_000591315.1_wls-5-8	-	wls-5-8
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.04811	52.1	-	CMXR01	190	2309	2055	3/23/15	3/21/17	Scaffold	SC	SAMEA1031661	GCA_001159185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/185/GCA_001159185.1_6714_1_9	-	NM1446
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.00795	66	-	JTYH01	114	6754	6513	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105450	GCA_000796295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/295/GCA_000796295.1_AZPAE14442	25367914	AZPAE14442
Acinetobacter baumannii 1406750	1310617	PRJNA194693	194693	Proteobacteria	Gammaproteobacteria	4.14638	39	-	JEWK01	227	4181	3818	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02380507	GCA_000580575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/575/GCA_000580575.1_ASM58057v1	-	1406750
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.14848	35.3	-	LBLA01	24	2224	2095	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435009	GCA_001018335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/335/GCA_001018335.1_ASM101833v1	25946017	BE-PW-096
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.0603	41.1	-	FIOL01	21	2068	1976	2/10/16	3/19/17	Contig	SC	SAMEA1566177	GCA_900051965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/965/GCA_900051965.1_8337_6_60	-	EN170
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.44881	38.3	-	FJMF01	33	3160	3022	2/20/16	3/27/17	Contig	SC	SAMEA2078028	GCA_900064345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/345/GCA_900064345.1_10625_3_67	-	2532STDY5467636
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.68506	50.7	-	CWYC01	384	5199	4506	7/16/15	2/24/17	Scaffold	SC	SAMEA2445703	GCA_001253515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/515/GCA_001253515.1_12971_8_22	-	H092140107
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.21146	68.1	-	LXBT01	133	7460	6882	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208745	GCA_001979885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/885/GCA_001979885.1_ASM197988v1	-	MSHR1289
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.19318	47.6	-	MWGS01	99	4069	3893	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263875	GCA_002098365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/365/GCA_002098365.1_ASM209836v1	28219321	CISM_191
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.31805	29.2	-	CZXN01	1507	3904	3674	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664014	GCA_900007595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/595/GCA_900007595.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.08263	45.3	-	LQCE01	32	4923	4683	4/4/16	3/19/17	Contig	Health Canada	SAMN04377387	GCA_001609515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/515/GCA_001609515.1_ASM160951v1	-	A5Z652
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.86182	56.9	-	LEXU01	10	5975	5679	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280311	GCA_001032355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/355/GCA_001032355.1_Kleb_pneu_CHS170_V1	-	CHS170
Enterococcus faecalis	1351	PRJNA359372	359372	Terrabacteria group	Firmicutes	2.8626	37.5	-	MSQO01	99	2941	2791	4/24/17	4/26/17	Contig	Inner Mongolia Agricultural University	SAMN06190464	GCA_002106995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/995/GCA_002106995.1_ASM210699v1	-	QH9-5
Neisseria gonorrhoeae	485	PRJEB2999	204665	Proteobacteria	Betaproteobacteria	2.14998	52.4	-	CFRU01	67	2513	2179	3/15/15	4/11/17	Scaffold	SC	SAMEA1690433	GCA_001355055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/055/GCA_001355055.1_8289_2_11	-	GCGS011
Enterococcus faecium	1352	PRJNA342049	342049	Terrabacteria group	Firmicutes	2.77251	37.7	-	MJDZ01	28	2806	2619	4/3/17	4/5/17	Contig	Lethbridge Research Centre	SAMN05735023	GCA_002077915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/915/GCA_002077915.1_ASM207791v1	28270110	F1213D 01
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.8191	67.9	-	CSMJ01	442	3744	3268	3/22/15	3/26/17	Scaffold	SC	SAMEA751156	GCA_001206235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/235/GCA_001206235.1_5515_8_8	-	B072
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66241	31.4	-	FBPY01	33	1720	1625	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683482	GCA_001492655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/655/GCA_001492655.1_H132940658	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.04317	54.8	-	FKIT01	29	4947	4704	4/14/16	3/28/17	Scaffold	SC	SAMEA2273158	GCA_900077035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/035/GCA_900077035.1_12045_4_36	-	e381
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.91349	64.3	-	FVTI01	21	4874	4739	3/10/17	3/18/17	Contig	SC	SAMEA2069153	GCA_900138935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/935/GCA_900138935.1_10208_3_61	-	486
Pseudomonas sp. NFACC06-1	1566240	PRJEB17252	351418	Proteobacteria	Gammaproteobacteria	6.43572	61	-	FONJ01	90	5840	5576	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159367	GCA_900112875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/112/875/GCA_900112875.1_IMG-taxon_2599185317_annotated_assembly	-	NFACC06-1
Streptomyces sp. NRRL S-149	1463885	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.50404	69	-	JOBJ01	330	-	-	7/1/14	7/3/14	Scaffold	University of Illinois	SAMN02645390	GCA_000716275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/275/GCA_000716275.1_ASM71627v1	-	NRRL S-149
Streptomyces sp. NRRL S-20	1463894	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.4693	68.3	-	JOBK01	446	-	-	7/1/14	7/1/14	Scaffold	University of Illinois	SAMN02645391	GCA_000716285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/285/GCA_000716285.1_ASM71628v1	-	NRRL S-20
Pseudomonas sp. NFACC45	1566201	PRJEB17333	351498	Proteobacteria	Gammaproteobacteria	6.16418	60.2	-	FOPO01	31	5529	5357	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159297	GCA_900113505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/505/GCA_900113505.1_IMG-taxon_2599185188_annotated_assembly	-	NFACC45
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.90881	64.2	-	FVTH01	21	4865	4728	3/10/17	3/18/17	Contig	SC	SAMEA2070910	GCA_900138945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/945/GCA_900138945.1_10208_3_63	-	488
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.93285	54.7	-	FKDY01	62	4848	4565	4/6/16	3/28/17	Scaffold	SC	SAMEA2273159	GCA_900077045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/045/GCA_900077045.1_12045_4_37	-	e395
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.81461	31.1	-	FBBQ01	75	1884	1759	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683103	GCA_001492675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/675/GCA_001492675.1_W17C	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.72859	67.5	-	CSQV01	850	3772	2989	3/23/15	3/26/17	Scaffold	SC	SAMEA1931536	GCA_001206335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/335/GCA_001206335.1_5463_3_1	-	B068
Enterococcus faecium	1352	PRJNA258405	258405	Terrabacteria group	Firmicutes	3.73359	37.7	-	NBVP01	393	4098	2644	4/28/17	4/28/17	Contig	Universidade de Sao Paulo	SAMN06678219	GCA_002115365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/365/GCA_002115365.1_ASM211536v1	-	EFP6CTSP
Neisseria gonorrhoeae	485	PRJNA341407	341407	Proteobacteria	Betaproteobacteria	2.06144	52.6	-	MTGL01	167	2378	2112	2/13/17	4/11/17	Scaffold	California Department of Public Health	SAMN05721787	GCA_001997645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/645/GCA_001997645.1_ASM199764v1	-	ATCC 49226
Enterococcus faecalis	1351	PRJNA359372	359372	Terrabacteria group	Firmicutes	2.95794	37.5	-	MSQN01	95	3014	2879	4/24/17	4/26/17	Contig	Inner Mongolia Agricultural University	SAMN06190463	GCA_002107005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/005/GCA_002107005.1_ASM210700v1	-	QH29-4
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.85876	57	-	LEXV01	12	5964	5676	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280313	GCA_001032365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/365/GCA_001032365.1_Kleb_pneu_CHS172_V1	-	CHS172
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.14295	45.3	-	LQCF01	41	4932	4724	4/4/16	3/19/17	Contig	Health Canada	SAMN04377388	GCA_001609525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/525/GCA_001609525.1_ASM160952v1	-	A5Z853
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.1998	28.8	-	CZXZ01	848	3911	3725	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664037	GCA_900007605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/605/GCA_900007605.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.19681	47.6	-	MWGU01	112	4063	3894	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263873	GCA_002098415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/415/GCA_002098415.1_ASM209841v1	28219321	CISM_188
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.97537	68.1	-	LXBV01	223	7274	6630	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208747	GCA_001979895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/895/GCA_001979895.1_ASM197989v1	-	MSHR0232
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.81191	50.7	-	CWVF01	386	5380	4632	7/16/15	2/24/17	Scaffold	SC	SAMEA3345071	GCA_001253535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/535/GCA_001253535.1_Sg_201400063_CAGATC_L001	-	201400063_1
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.47683	38.3	-	FJME01	33	3189	3057	2/20/16	3/27/17	Contig	SC	SAMEA2077987	GCA_900064355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/355/GCA_900064355.1_10625_3_69	-	2532STDY5467638
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04793	41.2	-	FIOT01	21	2060	1953	2/10/16	3/19/17	Contig	SC	SAMEA1566014	GCA_900051975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/975/GCA_900051975.1_8337_6_71	-	EN330
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.02313	35.1	-	LBLB01	21	2076	1952	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435010	GCA_001018375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/375/GCA_001018375.1_ASM101837v1	25946017	BE-PW-101
Acinetobacter baumannii 1419130	1310619	PRJNA194695	194695	Proteobacteria	Gammaproteobacteria	4.3826	39	-	JEWL01	153	4333	4038	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02380508	GCA_000580595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/595/GCA_000580595.1_ASM58059v1	-	1419130
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.26875	66.6	-	JTYG01	47	5938	5793	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105451	GCA_000796325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/325/GCA_000796325.1_AZPAE14443	25367914	AZPAE14443
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05335	52.1	-	CMXD01	168	2307	2048	3/23/15	3/21/17	Scaffold	SC	SAMEA1031638	GCA_001160445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/445/GCA_001160445.1_6714_1_18	-	NM1578
Helicobacter pylori wls-5-13	1460430	PRJNA237697	237697	Proteobacteria	delta/epsilon subdivisions	1.57385	38.8	-	JDVN01	35	1562	1408	3/17/14	3/24/17	Contig	Academy of Military Medical Sciences	SAMN02639411	GCA_000591335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/335/GCA_000591335.1_wls-5-13	-	wls-5-13
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.19984	39.5	-	CMKZ01	98	2432	2188	3/23/15	3/4/17	Contig	SC	SAMEA1029255	GCA_001093205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/205/GCA_001093205.1_7054_5_20	-	SMRU3068
Escherichia coli MS 16-3	749542	PRJNA47259	47259	Proteobacteria	Gammaproteobacteria	4.98216	50.5	-	ADUA01	105	5171	4799	5/21/10	2/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189172	GCA_000164495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/495/GCA_000164495.1_ASM16449v1	-	MS 16-3
Mycobacterium tuberculosis TKK_05SA_0055	1448555	PRJNA235560	235560	Terrabacteria group	Actinobacteria	4.43163	65.6	-	JJVC01	69	4341	4130	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586050	GCA_000653815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/815/GCA_000653815.1_Myco_tube_TKK_05SA_0055_V1	-	TKK_05SA_0055
Bacillus cereus Rock3-28	526983	PRJNA29677	29677	Terrabacteria group	Firmicutes	6.0415	35.3466	chromosome:CM000730.1	ACMI01	1	11530	11456	4/30/09	11/19/13	Chromosome	Naval Medical Research Center	SAMN00727710	GCA_000161195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/161/195/GCA_000161195.1_ASM16119v1	22645259	Rock3-28
Listeria monocytogenes SHL011	1302631	PRJNA192208	192208	Terrabacteria group	Firmicutes	2.866	37.9	-	APIK01	17	2902	2837	12/15/14	2/26/17	Contig	"University of Maryland, College Park"	SAMN03265954	GCA_000801555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/555/GCA_000801555.1_L_monocytogenes_SHL011_v1.0	-	SHL011
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66282	30.4	-	CUTE01	20	1747	1649	3/31/15	3/18/17	Contig	SC	SAMEA1400996	GCA_001234285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/285/GCA_001234285.1_7213_3_22	-	OXC6565
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120597	1412606	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007338.2/CP007338.2	-	1	4706	4445	4/2/14	3/2/17	Chromosome	LFZ	SAMN02384327	GCA_000625515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/515/GCA_000625515.2_ASM62551v2	24786953	EC20120597
Staphylococcus aureus DAR5883	1409761	PRJNA224179	224179	Terrabacteria group	Firmicutes	2.95522	32.9	-	JBTJ01	10	3130	2935	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02383546	GCA_000525445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/445/GCA_000525445.1_Stap_aure_DAR5883_V1	-	DAR5883
Staphylococcus aureus DAR5876	1409762	PRJNA224180	224180	Terrabacteria group	Firmicutes	2.95858	33	-	JBTK01	16	3134	2903	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02383547	GCA_000525465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/465/GCA_000525465.1_Stap_aure_DAR5876_V1	-	DAR5876
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120685	1412534	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68583	52.1	chromosome:NZ_CP007339.1/CP007339.2	-	1	4701	4433	4/2/14	3/2/17	Chromosome	LFZ	SAMN02384255	GCA_000625535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/535/GCA_000625535.2_ASM62553v2	24786953	EC20120685
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.8011	30.2	-	CUKF01	20	1920	1768	3/31/15	3/18/17	Contig	SC	SAMEA1010332	GCA_001234305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/305/GCA_001234305.1_7038_3_72	-	OXC6322
Listeria monocytogenes SHL012	1302632	PRJNA192209	192209	Terrabacteria group	Firmicutes	2.92625	37.9	-	APIL01	23	2958	2885	12/15/14	2/26/17	Contig	"University of Maryland, College Park"	SAMN03265961	GCA_000801575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/575/GCA_000801575.1_L_monocytogenes_SHL012_v1.0	-	SHL012
Bacillus cereus G9241	269801	PRJNA10788	10788	Terrabacteria group	Firmicutes	5.93494	35.2	-	AAEK01	207	6147	6146	5/21/04	12/5/13	Scaffold	TIGR	SAMN02435890	GCA_000167215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/215/GCA_000167215.1_ASM16721v1	15155910	G9241
Mycobacterium tuberculosis TKK_05SA_0058	1448556	PRJNA235561	235561	Terrabacteria group	Actinobacteria	4.40426	65.6	-	JJVB01	72	4324	4142	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586051	GCA_000653835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/835/GCA_000653835.1_Myco_tube_TKK_05SA_0058_V1	-	TKK_05SA_0058
Escherichia coli MS 175-1	749544	PRJNA47263	47263	Proteobacteria	Gammaproteobacteria	4.69641	50.6	-	ADUB01	139	4792	4485	5/21/10	2/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189173	GCA_000164515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/515/GCA_000164515.1_ASM16451v1	-	MS 175-1
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.11486	39.6	-	CMFG01	62	2310	2077	3/21/15	3/11/17	Contig	SC	SAMEA1029012	GCA_001093285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/285/GCA_001093285.1_7011_6_11	-	SMRU2819
Helicobacter pylori wls-5-14	1460431	PRJNA237698	237698	Proteobacteria	delta/epsilon subdivisions	1.56783	38.8	-	JDVM01	67	1564	1408	3/17/14	3/24/17	Contig	Academy of Military Medical Sciences	SAMN02639412	GCA_000591355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/355/GCA_000591355.1_wls-5-14	-	wls-5-14
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.24626	51.9	-	CMYZ01	220	2598	2229	3/23/15	3/21/17	Scaffold	SC	SAMEA1031732	GCA_001165245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/245/GCA_001165245.1_6714_3_2	-	NM2033
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.05286	65.8	-	JTYF01	88	6795	6541	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105452	GCA_000796345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/345/GCA_000796345.1_AZPAE14453	25367914	AZPAE14453
Acinetobacter baumannii 1440422	1310641	PRJNA194717	194717	Proteobacteria	Gammaproteobacteria	3.86117	39	-	JEWO01	356	4067	3491	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02380511	GCA_000580615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/615/GCA_000580615.1_ASM58061v1	-	1440422
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.08276	35.3	-	LBLC01	25	2168	2038	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435011	GCA_001018395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/395/GCA_001018395.1_ASM101839v1	25946017	BE-PW-108
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.07129	41.2	-	FIOW01	24	2097	1983	2/10/16	3/19/17	Contig	SC	SAMEA1566106	GCA_900051985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/985/GCA_900051985.1_8337_6_72	-	EN370
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.56	38.3	-	FJMH01	38	3272	3145	2/20/16	3/27/17	Contig	SC	SAMEA2077991	GCA_900064365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/365/GCA_900064365.1_10625_3_81	-	2532STDY5467650
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.91872	50.4	-	CXAA01	442	5539	4744	7/17/15	2/24/17	Scaffold	SC	SAMEA2445757	GCA_001253595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/595/GCA_001253595.1_12971_8_66	-	H134220679
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.22288	68.1	-	LXBU01	224	7491	6867	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208746	GCA_001979905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/905/GCA_001979905.1_ASM197990v1	-	MSHR0200
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.18538	47.6	-	MWGT01	154	3994	3879	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263874	GCA_002098425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/425/GCA_002098425.1_ASM209842v1	28219321	CISM_189
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.25265	29	-	FACT01	1503	3868	3618	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664156	GCA_900007615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/615/GCA_900007615.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.17233	45.2	-	LQCC01	44	5027	4772	4/4/16	3/19/17	Contig	Health Canada	SAMN04377152	GCA_001609575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/575/GCA_001609575.1_ASM160957v1	-	Sep-66
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.93817	56.9	-	LEXW01	13	6041	5751	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280314	GCA_001032375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/375/GCA_001032375.1_Kleb_pneu_CHS173_V1	-	CHS173
Enterococcus faecalis	1351	PRJNA359372	359372	Terrabacteria group	Firmicutes	2.86286	37.5	-	MSQP01	122	2913	2768	4/24/17	4/26/17	Contig	Inner Mongolia Agricultural University	SAMN06190465	GCA_002107015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/015/GCA_002107015.1_ASM210701v1	-	WZ21-1
Neisseria gonorrhoeae SK14515	1352523	PRJNA209340	209340	Proteobacteria	Betaproteobacteria	2.08167	52.6	-	ATPM01	655	2449	2368	6/10/15	6/10/15	Contig	"Read Laboratory, Emory University"	SAMN02338789	GCA_001025485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/485/GCA_001025485.1_ASM102548v1	-	SK14515
Enterococcus faecium	1352	PRJNA258204	258204	Terrabacteria group	Firmicutes	3.39693	37.5	-	NBVQ01	856	3935	3030	4/28/17	4/28/17	Contig	Universidade de Sao Paulo	SAMN06678230	GCA_002115405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/405/GCA_002115405.1_ASM211540v1	-	EFM1CSP
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.7764	67.8	-	CSQN01	798	3802	3139	3/22/15	3/26/17	Scaffold	SC	SAMEA751292	GCA_001206615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/615/GCA_001206615.1_5476_2_1	-	B259
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65952	31.4	-	FBCS01	18	1721	1631	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683133	GCA_001492695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/695/GCA_001492695.1_EC4250	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.1409	54.8	-	FKDW01	53	5115	4876	4/6/16	3/28/17	Scaffold	SC	SAMEA2273160	GCA_900077055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/055/GCA_900077055.1_12045_4_38	-	e391
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.41062	63.9	-	FVTG01	88	5465	5290	3/10/17	3/18/17	Contig	SC	SAMEA2070909	GCA_900138955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/955/GCA_900138955.1_10208_3_60	-	485
Pseudomonas sp. NFACC54	1566218	PRJEB17338	351493	Proteobacteria	Gammaproteobacteria	6.76456	60.7	-	FOPT01	78	6132	5920	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159302	GCA_900113555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/555/GCA_900113555.1_IMG-taxon_2599185321_annotated_assembly	-	NFACC54
Streptomyces sp. NRRL WC-3641	1463927	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.74711	70.2	-	JOBM01	116	-	-	7/1/14	5/13/16	Scaffold	University of Illinois	SAMN02645393	GCA_000716315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/716/315/GCA_000716315.1_ASM71631v1	-	NRRL WC-3641
Streptomyces sp. NRRL S-426	1463906	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.7915	68.7	-	JODB01	563	-	-	7/1/14	7/3/14	Scaffold	University of Illinois	SAMN02645434	GCA_000722025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/025/GCA_000722025.1_ASM72202v1	-	NRRL S-426
Pseudomonas sp. NFPP08	1566212	PRJEB17366	351545	Proteobacteria	Gammaproteobacteria	6.95921	63.4	-	FOQR01	23	6304	6155	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159416	GCA_900113795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/795/GCA_900113795.1_IMG-taxon_2599185166_annotated_assembly	-	NFPP08
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21311	64	-	FVTK01	23	5262	5150	3/10/17	3/18/17	Contig	SC	SAMEA2069154	GCA_900138965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/965/GCA_900138965.1_10208_3_64	-	489
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.82352	54.7	-	FKDX01	56	4722	4481	4/6/16	3/28/17	Scaffold	SC	SAMEA2273161	GCA_900077065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/065/GCA_900077065.1_12045_4_39	-	e400
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66057	31.4	-	FBCO01	26	1720	1628	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683131	GCA_001492735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/735/GCA_001492735.1_EC5520	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.82107	67.9	-	CSOP01	305	3673	3291	3/22/15	3/26/17	Scaffold	SC	SAMEA751183	GCA_001206895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/895/GCA_001206895.1_5476_7_6	-	B026
Enterococcus faecium	1352	PRJNA258406	258406	Terrabacteria group	Firmicutes	3.32917	37.7	-	NBVO01	156	3502	2372	4/28/17	7/7/17	Contig	Universidade de Sao Paulo	SAMN06678028	GCA_002115415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/415/GCA_002115415.1_ASM211541v1	-	VREfm 320/07
Neisseria gonorrhoeae SK23020	1352517	PRJNA209352	209352	Proteobacteria	Betaproteobacteria	2.13611	52.4	-	ATPS01	719	2512	2432	6/10/15	6/10/15	Contig	"Read Laboratory, Emory University"	SAMN02338795	GCA_001025535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/535/GCA_001025535.1_ASM102553v1	-	SK23020
Enterococcus faecalis	1351	PRJNA359372	359372	Terrabacteria group	Firmicutes	2.68303	38	-	MSQQ01	405	2753	2556	4/24/17	4/26/17	Contig	Inner Mongolia Agricultural University	SAMN06190466	GCA_002107055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/055/GCA_002107055.1_ASM210705v1	-	WZ34-2
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.53931	57.2	-	LEXX01	8	5454	5231	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280315	GCA_001032425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/425/GCA_001032425.1_Kleb_pneu_CHS174_V1	-	CHS174
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.09805	45.3	-	LQCD01	44	4899	4692	4/4/16	3/19/17	Contig	Health Canada	SAMN04377384	GCA_001609595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/595/GCA_001609595.1_ASM160959v1	-	A5Z273
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.12369	28.6	-	FAEC01	406	3762	3655	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664194	GCA_900007625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/625/GCA_900007625.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.19426	47.6	-	MWGV01	113	4046	3892	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263872	GCA_002098435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/435/GCA_002098435.1_ASM209843v1	28219321	CISM_179
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.21122	68.2	-	LXBW01	415	7509	6748	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208748	GCA_001979945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/945/GCA_001979945.1_ASM197994v1	-	MSHR0295
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.53421	50.7	-	CXAR01	348	4824	4368	7/16/15	2/24/17	Scaffold	SC	SAMEA954742	GCA_001253635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/635/GCA_001253635.1_5008_7_2	-	Sh55623_401055
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.55303	38.3	-	FJMI01	35	3260	3130	2/20/16	3/27/17	Contig	SC	SAMEA2080799	GCA_900064375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/375/GCA_900064375.1_10625_3_80	-	2532STDY5467649
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.06306	41.1	-	FIRD01	27	2070	1960	2/10/16	3/19/17	Contig	SC	SAMEA1566015	GCA_900051995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/995/GCA_900051995.1_8525_5_68	-	VS2979
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.07346	35.3	-	LBLD01	25	2119	1996	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435012	GCA_001018405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/405/GCA_001018405.1_ASM101840v1	25946017	BE-PW-110
Acinetobacter baumannii 146457	1310623	PRJNA194699	194699	Proteobacteria	Gammaproteobacteria	4.07415	42.8	-	JEWS01	38	3913	3709	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02380515	GCA_000580655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/655/GCA_000580655.1_ASM58065v1	-	146457
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.03416	65.9	-	JTYE01	125	6805	6564	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105453	GCA_000796365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/365/GCA_000796365.1_AZPAE14463	25367914	AZPAE14463
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.20866	51.9	-	CMXB01	145	2516	2200	3/23/15	3/21/17	Scaffold	SC	SAMEA1031741	GCA_001166285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/285/GCA_001166285.1_6714_1_12	-	NM1483
Helicobacter pylori wls-5-15	1460432	PRJNA237699	237699	Proteobacteria	delta/epsilon subdivisions	1.60846	38.8	-	JDVL01	78	1586	1445	3/17/14	3/24/17	Contig	Academy of Military Medical Sciences	SAMN02639413	GCA_000591375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/375/GCA_000591375.1_wls-5-15	-	wls-5-15
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.10701	39.6	-	CNOF02	144	2288	2076	3/23/15	3/5/17	Contig	SC	SAMEA1032667	GCA_001093345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/345/GCA_001093345.2_6925_2_79	-	R34-3060
Escherichia coli MS 200-1	749550	PRJNA47275	47275	Proteobacteria	Gammaproteobacteria	5.06981	50.4	-	ADUC01	153	5195	4814	5/21/10	2/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189179	GCA_000164535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/535/GCA_000164535.1_ASM16453v1	-	MS 200-1
Mycobacterium tuberculosis TKK_04_0074	1448559	PRJNA235564	235564	Terrabacteria group	Actinobacteria	4.40975	65.6	-	JJVA01	72	4322	4129	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586054	GCA_000653855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/855/GCA_000653855.1_Myco_tube_TKK_04_0074_V1	-	TKK_04_0074
Bacillus cereus W	405917	PRJNA17717	17717	Terrabacteria group	Firmicutes	5.24057	35.5	-	ABCZ02	102	5570	5160	6/26/07	12/5/13	Scaffold	TIGR	SAMN02436288	GCA_000181595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/181/595/GCA_000181595.1_ASM18159v1	-	W
Listeria monocytogenes SHL013	1302633	PRJNA192211	192211	Terrabacteria group	Firmicutes	2.86344	37.9	-	APIM01	20	2880	2798	12/15/14	2/26/17	Contig	"University of Maryland, College Park"	SAMN03265960	GCA_000801595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/595/GCA_000801595.1_L_monocytogenes_SHL013_v1.0	-	SHL013
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.68592	30.4	-	CUSZ01	21	1763	1656	3/31/15	3/18/17	Contig	SC	SAMEA1401147	GCA_001234325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/325/GCA_001234325.1_7213_3_18	-	OXC6561
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120686	1412607	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68583	52.2	chromosome:NZ_CP007340.2/CP007340.2	-	1	4709	4448	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384328	GCA_000625555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/555/GCA_000625555.2_ASM62555v2	24786953	EC20120686
Staphylococcus aureus DAR5866	1409763	PRJNA224181	224181	Terrabacteria group	Firmicutes	2.97447	32.9	-	JBTL01	26	3151	2949	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02383548	GCA_000525485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/485/GCA_000525485.1_Stap_aure_DAR5866_V1	-	DAR5866
Staphylococcus aureus DAR5860	1409764	PRJNA224182	224182	Terrabacteria group	Firmicutes	2.91104	32.9	-	JBTM01	16	3035	2847	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02383549	GCA_000525505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/505/GCA_000525505.1_Stap_aure_DAR5860_V1	-	DAR5860
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120687	1412608	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68583	52.2	chromosome:NZ_CP007341.2/CP007341.2	-	1	4709	4449	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384329	GCA_000625575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/575/GCA_000625575.2_ASM62557v2	24786953	EC20120687
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64942	30.4	-	CUVZ01	21	1711	1601	3/31/15	3/18/17	Contig	SC	SAMEA1401322	GCA_001234425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/425/GCA_001234425.1_7213_3_94	-	OXC6639
Listeria monocytogenes	1639	PRJNA268442	268442	Terrabacteria group	Firmicutes	2.94448	37.9	-	JUKE01	13	3029	2845	12/22/14	2/26/17	Contig	Banaras Hindu University	SAMN03220230	GCA_000806395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/395/GCA_000806395.1_ASM80639v1	25657276	BHU1
Bacillus cereus NVH0597-99	451707	PRJNA19955	19955	Terrabacteria group	Firmicutes	5.3487	35.3	-	ABDK02	71	5698	5265	7/11/07	12/5/13	Scaffold	TIGR	SAMN02436289	GCA_000181635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/181/635/GCA_000181635.1_ASM18163v1	-	NVH0597-99
Mycobacterium tuberculosis TKK_04_0085	1448560	PRJNA235565	235565	Terrabacteria group	Actinobacteria	4.41374	65.6	-	JJUZ01	80	4303	4091	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586055	GCA_000653875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/875/GCA_000653875.1_Myco_tube_TKK_04_0085_V1	-	TKK_04_0085
Escherichia coli MS 196-1	749548	PRJNA47271	47271	Proteobacteria	Gammaproteobacteria	5.25318	50.6	-	ADUD01	311	5579	5086	5/21/10	2/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189177	GCA_000164555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/555/GCA_000164555.1_ASM16455v1	-	MS 196-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06547	39.6	-	CNNM02	151	2262	2059	3/22/15	3/11/17	Contig	SC	SAMEA1032611	GCA_001093365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/365/GCA_001093365.2_6925_1_60	-	R34-3041
Helicobacter pylori wls-5-18	1460435	PRJNA237702	237702	Proteobacteria	delta/epsilon subdivisions	1.62655	38.7	-	JDVI01	48	1607	1473	3/17/14	3/24/17	Contig	Academy of Military Medical Sciences	SAMN02639416	GCA_000591395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/395/GCA_000591395.1_wls-5-18	-	wls-5-18
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.29348	51.9	-	CMZI01	179	2618	2224	3/22/15	3/21/17	Scaffold	SC	SAMEA1031704	GCA_001169005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/005/GCA_001169005.1_6714_4_15	-	NM2809
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.69873	66.1	-	JTYD01	110	6484	6252	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105454	GCA_000796385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/385/GCA_000796385.1_AZPAE14499	25367914	AZPAE14499
Acinetobacter baumannii 342950	1310640	PRJNA194716	194716	Proteobacteria	Gammaproteobacteria	4.13169	39.1	-	JEWZ01	296	3979	3655	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02380522	GCA_000580695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/695/GCA_000580695.1_ASM58069v1	-	342950
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.08106	35.3	-	LBLE01	27	2176	2044	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435013	GCA_001018415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/415/GCA_001018415.1_ASM101841v1	25946017	BE-PW-119
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04324	41.2	-	FIRQ01	26	2046	1927	2/10/16	3/19/17	Contig	SC	SAMEA1566050	GCA_900052005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/005/GCA_900052005.1_8525_5_81	-	VS3699
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54419	38.3	-	FJML01	37	3245	3113	2/20/16	3/27/17	Contig	SC	SAMEA2078035	GCA_900064385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/385/GCA_900064385.1_10625_3_88	-	2532STDY5467657
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.76536	50.5	-	CWWV01	552	5592	4471	7/16/15	2/24/17	Scaffold	SC	SAMEA2434363	GCA_001253655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/655/GCA_001253655.1_12830_1_36	-	KY 834
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.11147	68.2	-	LXBY01	151	7368	6771	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208750	GCA_001979965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/965/GCA_001979965.1_ASM197996v1	-	MSHR0474
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.19394	47.6	-	MWGW01	114	4035	3892	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263871	GCA_002098445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/445/GCA_002098445.1_ASM209844v1	28219321	CISM_178
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.28517	29.2	-	FAEH01	1784	3943	3624	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664196	GCA_900007635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/635/GCA_900007635.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.0946	45.3	-	LQCS01	68	4935	4657	4/4/16	3/19/17	Contig	Health Canada	SAMN04377550	GCA_001609615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/615/GCA_001609615.1_ASM160961v1	-	A5Z860
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.79285	57	-	LEXY01	10	5872	5608	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280317	GCA_001032435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/435/GCA_001032435.1_Kleb_pneu_CHS176_V1	-	CHS176
Enterococcus faecalis	1351	PRJNA359372	359372	Terrabacteria group	Firmicutes	3.00408	37.3	-	MSQS01	107	3111	2960	4/24/17	4/26/17	Contig	Inner Mongolia Agricultural University	SAMN06190468	GCA_002107075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/075/GCA_002107075.1_ASM210707v1	-	XM26-4
Neisseria gonorrhoeae SK708	1352531	PRJNA209312	209312	Proteobacteria	Betaproteobacteria	2.30873	51.7	-	ATPE01	595	2577	2479	6/10/15	6/10/15	Contig	"Read Laboratory, Emory University"	SAMN02338782	GCA_001025745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/025/745/GCA_001025745.1_ASM102574v1	-	SK708
Enterococcus faecium	1352	PRJNA384868	384868	Terrabacteria group	Firmicutes	3.18838	38.1	-	NETE01	15	3359	3016	5/8/17	5/10/17	Contig	Children's Hospital of Philadelphia	SAMN06850204	GCA_002119055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/055/GCA_002119055.1_ASM211905v1	-	463-ANA
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.78822	67.8	-	CSSN01	533	3761	3229	3/22/15	3/26/17	Scaffold	SC	SAMEA751411	GCA_001206935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/935/GCA_001206935.1_5476_3_8	-	B102
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66098	31.4	-	FBAY01	26	1711	1621	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683095	GCA_001492775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/775/GCA_001492775.1_EC4393	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.74629	55.1	-	FKDZ01	71	4669	4418	4/6/16	3/28/17	Scaffold	SC	SAMEA2273163	GCA_900077085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/085/GCA_900077085.1_12045_4_40	-	e404
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96839	64.2	-	FSMB01	21	4911	4768	12/14/16	3/21/17	Contig	SC	SAMEA2071456	GCA_900138985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/985/GCA_900138985.1_10250_1_36	-	376
Pseudomonas sp. NFPP04	1566215	PRJEB17370	351541	Proteobacteria	Gammaproteobacteria	6.28568	61	-	FOQS01	31	5743	5547	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159342	GCA_900113815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/815/GCA_900113815.1_IMG-taxon_2599185190_annotated_assembly	-	NFPP04
Streptomyces sp. NRRL S-448	1463907	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.0861	67.5	-	JOCZ01	611	-	-	7/1/14	7/3/14	Scaffold	University of Illinois	SAMN02645432	GCA_000722035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/035/GCA_000722035.1_ASM72203v1	-	NRRL S-448
Streptomyces sp. NRRL S-732	1463918	PRJNA238534	238534	Terrabacteria group	Actinobacteria	11.1563	68.7	-	JODH01	767	-	-	7/1/14	7/3/14	Scaffold	University of Illinois	SAMN02645440	GCA_000722075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/075/GCA_000722075.1_ASM72207v1	-	NRRL S-732
Pseudomonas sp. NFPP11	1566209	PRJEB17377	351534	Proteobacteria	Gammaproteobacteria	6.28961	61	-	FORB01	34	5748	5551	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159344	GCA_900113895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/113/895/GCA_900113895.1_IMG-taxon_2599185290_annotated_assembly	-	NFPP11
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.19276	64.2	-	FSMD01	27	5241	5084	12/14/16	3/21/17	Contig	SC	SAMEA2068972	GCA_900138995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/995/GCA_900138995.1_10250_1_68	-	408
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.74732	55.1	-	FKEA01	74	4681	4425	4/6/16	3/28/17	Scaffold	SC	SAMEA2273496	GCA_900077095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/095/GCA_900077095.1_12045_5_70	-	e405
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65929	31.4	-	FAZP01	20	1725	1627	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683050	GCA_001492795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/795/GCA_001492795.1_EC3956	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.75218	67.7	-	CSMR01	608	3740	3124	3/22/15	3/26/17	Scaffold	SC	SAMEA751451	GCA_001207095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/095/GCA_001207095.1_5515_6_5	-	B126
Enterococcus faecium	1352	PRJNA384868	384868	Terrabacteria group	Firmicutes	3.1456	38.1	-	NETD01	9	3281	2963	5/8/17	5/10/17	Contig	Children's Hospital of Philadelphia	SAMN06850205	GCA_002119065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/065/GCA_002119065.1_ASM211906v1	-	463-AER
Neisseria gonorrhoeae	485	PRJNA294515	294515	Proteobacteria	Betaproteobacteria	1.94564	52.4	-	LJXH01	866	2242	1606	11/4/15	11/4/15	Contig	CNIKVI	SAMN04026674	GCA_001431825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/825/GCA_001431825.1_ASM143182v1	-	09_10_003
Enterococcus faecalis	1351	PRJNA359372	359372	Terrabacteria group	Firmicutes	2.90089	37.4	-	MSQR01	148	2976	2811	4/24/17	4/26/17	Contig	Inner Mongolia Agricultural University	SAMN06190467	GCA_002107085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/085/GCA_002107085.1_ASM210708v1	-	XJ76305
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.82894	57	-	LEXZ01	10	5926	5646	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280318	GCA_001032445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/445/GCA_001032445.1_Kleb_pneu_CHS177_V1	-	CHS177
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.04615	45.3	-	LQCW01	29	4841	4621	4/4/16	3/19/17	Contig	Health Canada	SAMN04378285	GCA_001609655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/655/GCA_001609655.1_ASM160965v1	-	C140
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.2373	28.8	-	FAGT01	1219	3940	3714	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664261	GCA_900007655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/655/GCA_900007655.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.03551	47.5	-	MWGZ01	96	3846	3688	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263868	GCA_002098495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/495/GCA_002098495.1_ASM209849v1	28219321	CISM_152
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.18234	68.1	-	LXBX01	350	7509	6806	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208749	GCA_001979975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/975/GCA_001979975.1_ASM197997v1	-	MSHR0347
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.65043	50.5	-	CXEU01	401	5040	4426	7/16/15	2/24/17	Scaffold	SC	SAMEA954542	GCA_001253675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/675/GCA_001253675.1_5417_3_2	-	20062087_1361418
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.41315	38.3	-	FJHD01	26	3125	3019	2/20/16	3/27/17	Contig	SC	SAMEA2080614	GCA_900064485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/485/GCA_900064485.1_10625_2_35	-	2532STDY5467508
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.13728	41	-	FIKU01	87	2155	2026	2/10/16	3/19/17	Contig	SC	SAMEA1316684	GCA_900052225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/225/GCA_900052225.1_7054_7_52	-	SS1057
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.03523	35.3	-	LBLF01	21	2094	1961	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435014	GCA_001018455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/455/GCA_001018455.1_ASM101845v1	25946017	BE-PW-123
Acinetobacter baumannii 4749	1310634	PRJNA194710	194710	Proteobacteria	Gammaproteobacteria	4.15992	38.9	-	JEXC01	356	4240	3770	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02380525	GCA_000580715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/715/GCA_000580715.1_ASM58071v1	-	4749
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.82304	66	-	JTYC01	121	6552	6349	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105455	GCA_000796405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/405/GCA_000796405.1_AZPAE14505	25367914	AZPAE14505
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.04253	52.1	-	CMYV01	205	2298	2041	3/23/15	3/17/17	Scaffold	SC	SAMEA1031696	GCA_001169725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/725/GCA_001169725.1_6714_3_17	-	NM2332
Helicobacter pylori SA35C	1345517	PRJEB4047	216072	Proteobacteria	delta/epsilon subdivisions	1.65911	38.9	-	CBNU01	43	1635	1468	9/21/13	3/24/17	Contig	MHH	SAMEA3138959	GCA_000604265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/265/GCA_000604265.1_SA35C	23898187	SA35C
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.12696	39.7	-	CMTK01	76	2279	1976	3/22/15	3/11/17	Contig	SC	SAMEA1022871	GCA_001093405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/405/GCA_001093405.1_5737_2_5	-	380
Escherichia coli MS 185-1	749546	PRJNA47267	47267	Proteobacteria	Gammaproteobacteria	4.96236	50.6	-	ADUE01	86	5081	4731	5/21/10	2/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189175	GCA_000164575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/575/GCA_000164575.1_ASM16457v1	-	MS 185-1
Mycobacterium tuberculosis TKK_04_0089	1448561	PRJNA235566	235566	Terrabacteria group	Actinobacteria	4.38866	65.6	-	JJUY01	87	4327	4112	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586056	GCA_000653895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/895/GCA_000653895.1_Myco_tube_TKK_04_0089_V1	-	TKK_04_0089
Bacillus cereus 03BB108	451709	PRJNA19959	19959	Terrabacteria group	Firmicutes	5.92578	34.9	-	ABDM02	66	6259	5892	7/11/07	12/5/13	Scaffold	TIGR	SAMN02436291	GCA_000181655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/181/655/GCA_000181655.1_ASM18165v1	-	03BB108
Listeria monocytogenes	1639	PRJNA268442	268442	Terrabacteria group	Firmicutes	2.94681	37.9	-	JUKG01	15	3022	2836	12/22/14	2/26/17	Contig	Banaras Hindu University	SAMN03222688	GCA_000806405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/405/GCA_000806405.1_ASM80640v1	25657276	BHU3
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.73359	30.2	-	CUPK01	18	1836	1709	3/31/15	3/18/17	Contig	SC	SAMEA1010645	GCA_001234605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/605/GCA_001234605.1_7092_1_20	-	OXC6467
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120697	1412553	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007342.1/CP007342.2	-	1	4711	4449	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384274	GCA_000625595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/595/GCA_000625595.2_ASM62559v2	24786953	EC20120697
Staphylococcus aureus DAR5844	1409765	PRJNA224183	224183	Terrabacteria group	Firmicutes	3.00268	32.9	-	JBTN01	10	3202	3007	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02383550	GCA_000525525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/525/GCA_000525525.1_Stap_aure_DAR5844_V1	-	DAR5844
Staphylococcus aureus DAR5842	1409766	PRJNA224184	224184	Terrabacteria group	Firmicutes	2.98311	33	-	JBTO01	18	3140	2940	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02383551	GCA_000525545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/545/GCA_000525545.1_Stap_aure_DAR5842_V1	-	DAR5842
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120722	1412550	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007343.2/CP007343.2	-	1	4709	4443	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384271	GCA_000625615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/615/GCA_000625615.2_ASM62561v2	24786953	EC20120722
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.65116	30.3	-	CUIN01	6	1747	1638	3/31/15	3/18/17	Contig	SC	SAMEA1010649	GCA_001234665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/665/GCA_001234665.1_7038_3_33	-	OXC6283
Listeria monocytogenes	1639	PRJNA268442	268442	Terrabacteria group	Firmicutes	2.94596	37.9	-	JUKF01	19	3027	2850	12/22/14	2/26/17	Contig	Banaras Hindu University	SAMN03222687	GCA_000806455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/455/GCA_000806455.1_ASM80645v1	25657276	BHU2
Bacillus cereus H3081.97	451708	PRJNA19957	19957	Terrabacteria group	Firmicutes	5.54331	35.1464	plasmid pH308197_10:CP001168.1; plasmid pH308197_11:CP001167.1; plasmid pH308197_258:CP001166.1; plasmid pH308197_29:CP001169.1; plasmid pH308197_3:CP001171.1; plasmid pH308197_73:CP001170.1	ABDL02	86	5887	5401	7/11/07	8/18/15	Contig	TIGR	SAMN02436290	GCA_000171035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/035/GCA_000171035.2_ASM17103v2	-	H3081.97
Mycobacterium tuberculosis TKK_04_0090	1448562	PRJNA235567	235567	Terrabacteria group	Actinobacteria	4.42346	65.6	-	JJUX01	66	4335	4151	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586057	GCA_000653915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/915/GCA_000653915.1_Myco_tube_TKK_04_0090_V1	-	TKK_04_0090
Escherichia coli MS 60-1	749530	PRJNA47211	47211	Proteobacteria	Gammaproteobacteria	5.228	50.4	-	ADUF01	136	5471	5062	5/21/10	2/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189183	GCA_000164595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/595/GCA_000164595.1_ASM16459v1	-	MS 60-1
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08964	39.5	-	CKUK01	42	2275	2040	3/21/15	3/11/17	Contig	SC	SAMEA1025742	GCA_001093465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/465/GCA_001093465.1_6823_3_13	-	SMRU1909
Helicobacter pylori SA46A	1345535	PRJEB4055	216002	Proteobacteria	delta/epsilon subdivisions	1.59986	39.2	-	CBNV01	70	1582	1410	9/21/13	3/24/17	Contig	MHH	SAMEA3138960	GCA_000604285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/285/GCA_000604285.1_SA46A	23898187	SA46A
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.13615	52.1	-	CMYA01	152	2404	2109	3/23/15	3/21/17	Scaffold	SC	SAMEA1031686	GCA_001174885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/885/GCA_001174885.1_6714_2_12	-	NM1901
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.51928	66.3	-	JTYB01	79	6243	6060	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105456	GCA_000796425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/425/GCA_000796425.1_AZPAE14509	25367914	AZPAE14509
Acinetobacter baumannii 724909	1310650	PRJNA194726	194726	Proteobacteria	Gammaproteobacteria	4.07269	39	-	JEXF01	178	4085	3802	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02380528	GCA_000580735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/735/GCA_000580735.1_ASM58073v1	-	724909
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	1.9812	35.2	-	LBLG01	25	2050	1911	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435015	GCA_001018475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/475/GCA_001018475.1_ASM101847v1	25946017	BE-PW-130
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.09582	41.1	-	FILB01	39	2093	1937	2/10/16	3/19/17	Contig	SC	SAMEA1316647	GCA_900052235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/235/GCA_900052235.1_7054_7_58	-	SS1067
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54126	38.3	-	FJIW01	61	3240	3089	2/20/16	3/27/17	Contig	SC	SAMEA2077541	GCA_900064495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/495/GCA_900064495.1_10625_2_61	-	2532STDY5467534
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.74843	50.7	-	CXJF01	373	5356	4562	7/16/15	2/24/17	Scaffold	SC	SAMEA2004854	GCA_001253715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/715/GCA_001253715.1_8289_7_92	-	87670
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.24464	68	-	LXBZ01	255	7536	6869	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208751	GCA_001979995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/979/995/GCA_001979995.1_ASM197999v1	-	MSHR1079
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.03216	47.5	-	MWGX01	101	3839	3684	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263870	GCA_002098515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/515/GCA_002098515.1_ASM209851v1	28219321	CISM_154
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.09437	28.7	-	FAGW01	928	3670	3512	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664262	GCA_900007665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/665/GCA_900007665.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.07626	45.3	-	LQCV01	38	4900	4674	4/4/16	3/19/17	Contig	Health Canada	SAMN04377553	GCA_001609675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/675/GCA_001609675.1_ASM160967v1	-	A5Z924
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.80625	57	-	LEYA01	6	5886	5618	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280320	GCA_001032455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/455/GCA_001032455.1_Kleb_pneu_CHS179_V1	-	CHS179
Enterococcus faecalis	1351	PRJNA359372	359372	Terrabacteria group	Firmicutes	2.87412	37.5	-	MSQT01	55	2909	2796	4/24/17	4/26/17	Contig	Inner Mongolia Agricultural University	SAMN06190469	GCA_002107095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/095/GCA_002107095.1_ASM210709v1	-	YM11-6
Neisseria gonorrhoeae	485	PRJNA322768	322768	Proteobacteria	Betaproteobacteria	1.96208	52.5	-	MBCP01	360	2142	1876	11/1/16	11/1/16	Contig	Orebro University Hospital	SAMN04853022	GCA_001859795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/859/795/GCA_001859795.1_ASM185979v1	-	USO_SK12-013
Enterococcus faecium	1352	PRJNA329509	329509	Terrabacteria group	Firmicutes	3.07295	37.7	-	MSIB01	314	3191	2996	5/22/17	5/31/17	Contig	Intermountain Healthcare	SAMN05413856	GCA_002158215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/158/215/GCA_002158215.1_ASM215821v1	-	IHC11
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.78067	67.8	-	CSMZ01	595	3770	3182	3/23/15	3/26/17	Scaffold	SC	SAMEA751426	GCA_001207655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/655/GCA_001207655.1_6062_3_8	-	B062
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.74971	31.2	-	FAYM01	18	1839	1743	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683011	GCA_001492815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/815/GCA_001492815.1_EC5726	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.67825	55.5	-	FKEB01	42	4555	4329	4/6/16	3/28/17	Scaffold	SC	SAMEA2273165	GCA_900077115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/115/GCA_900077115.1_12045_4_41	-	e432
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.91345	64.1	-	FVTN01	6	4924	4811	3/10/17	3/18/17	Contig	SC	SAMEA2146915	GCA_900139005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/005/GCA_900139005.1_10465_1_44	-	525
Pseudomonas sp. NFACC52	1566219	PRJEB17423	351647	Proteobacteria	Gammaproteobacteria	6.32003	61.2	-	FOSO01	80	5750	5527	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159473	GCA_900114295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/295/GCA_900114295.1_IMG-taxon_2599185316_annotated_assembly	-	NFACC52
Streptomyces sp. NRRL S-525	1463914	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.0623	67	-	JOGC01	1040	-	-	7/1/14	7/3/14	Scaffold	University of Illinois	SAMN02645445	GCA_000722095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/095/GCA_000722095.1_ASM72209v1	-	NRRL S-525
Streptomyces sp. NRRL S-984	1463923	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.2071	68.9	-	JOGF01	518	-	-	7/1/14	7/3/14	Scaffold	University of Illinois	SAMN02645448	GCA_000722115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/115/GCA_000722115.1_ASM72211v1	-	NRRL S-984
Pseudomonas sp. NFACC46-3	1566200	PRJEB17454	351617	Proteobacteria	Gammaproteobacteria	6.59068	60.8	-	FOTH01	82	5960	5757	10/30/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159307	GCA_900114515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/515/GCA_900114515.1_IMG-taxon_2599185324_annotated_assembly	-	NFACC46-3
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.99292	64.2	-	FSMC01	34	5008	4881	12/14/16	3/22/17	Contig	SC	SAMEA2070791	GCA_900139015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/015/GCA_900139015.1_10396_8_10	-	419
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.36169	52.1	-	FKED01	83	5349	5016	4/6/16	3/28/17	Scaffold	SC	SAMEA2273167	GCA_900077125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/125/GCA_900077125.1_12045_4_44	-	e438
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.78129	31	-	FBHN01	59	1844	1739	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683261	GCA_001492835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/835/GCA_001492835.1_NCTC12570	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.81563	67.9	-	CSPU01	289	3677	3295	3/22/15	3/26/17	Scaffold	SC	SAMEA751497	GCA_001207695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/695/GCA_001207695.1_5515_5_12	-	B114
Enterococcus faecium	1352	PRJNA329509	329509	Terrabacteria group	Firmicutes	2.92677	37.8	-	MSID01	316	3013	2841	5/22/17	5/31/17	Contig	Intermountain Healthcare	SAMN05413858	GCA_002158245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/158/245/GCA_002158245.1_ASM215824v1	-	IHC13
Enterococcus faecalis	1351	PRJNA359372	359372	Terrabacteria group	Firmicutes	2.92329	37.4	-	MSQU01	111	2991	2845	4/24/17	4/26/17	Contig	Inner Mongolia Agricultural University	SAMN06190470	GCA_002107125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/125/GCA_002107125.1_ASM210712v1	-	YM39-2
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.89692	56.9	-	LEYB01	12	6004	5708	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280322	GCA_001032505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/505/GCA_001032505.1_Kleb_pneu_CHS181_V1	-	CHS181
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.10157	45.3	-	LQGX01	49	4919	4670	4/4/16	3/19/17	Contig	Health Canada	SAMN04382997	GCA_001609715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/715/GCA_001609715.1_ASM160971v1	-	A4EZ964
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.13425	28.7	-	FAGV01	1262	3733	3565	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664263	GCA_900007675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/675/GCA_900007675.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.03735	47.5	-	MWHA01	109	3860	3688	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263867	GCA_002098525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/525/GCA_002098525.1_ASM209852v1	28219321	CISM_151
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.09192	68.2	-	LXCA01	192	7359	6822	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208752	GCA_001980025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/025/GCA_001980025.1_ASM198002v1	-	PHLS-9
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.75998	50.7	-	CWZY01	397	5387	4604	7/16/15	2/24/17	Scaffold	SC	SAMEA2445765	GCA_001253735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/735/GCA_001253735.1_12971_8_73	-	H141020368
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.58346	38.2	-	FJCF01	47	3298	3142	2/20/16	3/27/17	Contig	SC	SAMEA2059995	GCA_900064715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/715/GCA_900064715.1_10771_1_60	-	2531STDY5467341
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.03426	41.2	-	FIOX01	20	2047	1938	2/10/16	3/19/17	Contig	SC	SAMEA1566031	GCA_900052245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/245/GCA_900052245.1_8337_6_70	-	EN326
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.13557	35.5	-	LBLI01	45	2213	2062	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435003	GCA_001018485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/485/GCA_001018485.1_ASM101848v1	25946017	IMMI_409
Acinetobacter baumannii 951631	1310653	PRJNA194729	194729	Proteobacteria	Gammaproteobacteria	4.34823	39	-	JEXI01	365	4449	4059	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02380531	GCA_000580755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/755/GCA_000580755.1_ASM58075v1	-	951631
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.2891	66.6	-	JTYA01	52	5947	5804	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105457	GCA_000796445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/445/GCA_000796445.1_AZPAE14526	25367914	AZPAE14526
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.04014	52.1	-	CHWJ01	200	2290	2043	4/21/15	3/21/17	Scaffold	SC	SAMEA1031643	GCA_001349075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/075/GCA_001349075.1_6714_4_1	-	NM2431
Helicobacter pylori SA213C	1345593	PRJEB4104	216061	Proteobacteria	delta/epsilon subdivisions	1.61855	38.8	-	CBPK01	100	1604	1426	9/21/13	3/24/17	Contig	MHH	SAMEA3138961	GCA_000604305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/305/GCA_000604305.1_SA213C	23898187	SA213C
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12215	39.4	-	CLJC01	63	2300	2084	3/21/15	3/11/17	Contig	SC	SAMEA1028693	GCA_001093485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/485/GCA_001093485.1_6925_7_5	-	SMRU2501
Escherichia coli MS 57-2	749529	PRJNA47209	47209	Proteobacteria	Gammaproteobacteria	4.97274	50.6	-	ADUG01	67	5166	4854	5/21/10	2/22/17	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN00189182	GCA_000164615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/164/615/GCA_000164615.1_ASM16461v1	-	MS 57-2
Mycobacterium tuberculosis TKK_04_0094	1448563	PRJNA235568	235568	Terrabacteria group	Actinobacteria	4.45039	65.6	-	JJUW01	67	4339	4130	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586058	GCA_000653935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/935/GCA_000653935.1_Myco_tube_TKK_04_0094_V1	-	TKK_04_0094
Bacillus cereus SJ1	699184	PRJNA42505	42505	Terrabacteria group	Firmicutes	5.1564	35.4	-	ADFM01	254	2192	2184	6/21/10	7/16/14	Contig	University of Arizona	SAMN02472182	GCA_000177295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/295/GCA_000177295.1_ASM17729v1	20723231	SJ1
Listeria monocytogenes	1639	PRJNA265930	265930	Terrabacteria group	Firmicutes	2.92789	37.9	-	JTCP01	70	3008	2923	12/29/14	2/27/17	Contig	Karolinska Institutet	SAMN03154077	GCA_000808125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/125/GCA_000808125.1_ASM80812v1	-	SLU3267
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.76327	30.2	-	CUOE01	26	1830	1695	3/31/15	3/18/17	Contig	SC	SAMEA1010294	GCA_001234745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/745/GCA_001234745.1_7065_7_79	-	OXC6427
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121976	1412581	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007386.2/CP007386.2	-	1	4709	4451	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384302	GCA_000625635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/635/GCA_000625635.2_ASM62563v2	24786953	EC20121976
Staphylococcus aureus DAR5810	1409767	PRJNA224185	224185	Terrabacteria group	Firmicutes	2.94452	32.9	-	JBTP01	17	3086	2909	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02383552	GCA_000525565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/565/GCA_000525565.1_Stap_aure_DAR5810_V1	-	DAR5810
Staphylococcus aureus M0627	1388417	PRJNA216588	216588	Terrabacteria group	Firmicutes	2.85455	32.9	-	JBEI01	26	2991	2819	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325541	GCA_000527715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/715/GCA_000527715.1_Stap_aure_M0627_V1	-	M0627
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20085285	1412489	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68583	52.2	chromosome:NZ_CP007426.1/CP007426.2	-	1	4763	4500	4/1/14	3/2/17	Chromosome	LFZ	SAMN02384210	GCA_000625655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/655/GCA_000625655.2_ASM62565v2	24786953	SA20085285
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.68409	30.4	-	CUPZ01	24	1767	1640	3/31/15	3/18/17	Contig	SC	SAMEA1010368	GCA_001234825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/825/GCA_001234825.1_7092_1_35	-	OXC6482
Listeria monocytogenes	1639	PRJNA265931	265931	Terrabacteria group	Firmicutes	2.9302	37.9	-	JTCQ01	88	3001	2918	12/29/14	2/27/17	Contig	Karolinska Institutet	SAMN03154130	GCA_000808135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/135/GCA_000808135.1_ASM80813v1	-	SLU3268
Bacillus cereus	1396	PRJEB9876	290051	Terrabacteria group	Firmicutes	9.49747	38.9	-	CYHI01	839	9518	9506	8/27/15	8/27/15	Contig	University of Liverpool	SAMEA3484400	GCA_001286905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/905/GCA_001286905.1_Bacillus_JRS1	-	-
Mycobacterium tuberculosis TKK_04_0096	1448565	PRJNA235570	235570	Terrabacteria group	Actinobacteria	4.41971	65.6	-	JJUU01	68	4345	4148	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586060	GCA_000653955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/955/GCA_000653955.1_Myco_tube_TKK_04_0096_V1	-	TKK_04_0096
Escherichia coli H736	656414	PRJNA39033	39033	Proteobacteria	Gammaproteobacteria	4.70765	50.8	-	ADAU01	38	4866	4471	3/15/10	2/22/17	Scaffold	Broad Institute	SAMN02595366	GCA_000176535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/535/GCA_000176535.2_ASM17653v2	-	H736
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.10929	39.4	-	CMSC01	90	2360	2122	3/23/15	3/11/17	Contig	SC	SAMEA2062390	GCA_001093565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/565/GCA_001093565.1_9803_8_66	-	10B
Helicobacter pylori SA169A	1345575	PRJEB4086	216080	Proteobacteria	delta/epsilon subdivisions	1.65221	38.5	-	CBQH01	125	1632	1346	9/21/13	4/10/17	Contig	MHH	SAMEA3138962	GCA_000604325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/325/GCA_000604325.1_SA169A	23898187	SA169A
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.06368	52	-	CHWM01	119	2350	2033	4/21/15	3/21/17	Scaffold	SC	SAMEA1031647	GCA_001349095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/095/GCA_001349095.1_6731_8_4	-	NM3129
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.66188	66.3	-	JTXZ01	108	6413	6227	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105458	GCA_000796465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/465/GCA_000796465.1_AZPAE14533	25367914	AZPAE14533
Acinetobacter baumannii 1297549	1310606	PRJNA194682	194682	Proteobacteria	Gammaproteobacteria	3.86345	39.1	-	JEVV01	174	3814	3470	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02379548	GCA_000580775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/775/GCA_000580775.1_ASM58077v1	-	1297549
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.32549	35.7	-	LBLH01	91	2444	2174	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435002	GCA_001018495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/495/GCA_001018495.1_ASM101849v1	25946017	DK-B-USS-225
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.11248	41.1	-	FIGE01	53	2153	2013	2/10/16	3/19/17	Contig	SC	SAMEA1316540	GCA_900052515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/515/GCA_900052515.1_7114_5_29	-	LSS29
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.30013	38.3	-	FJDX01	16	2982	2864	2/20/16	3/27/17	Contig	SC	SAMEA2064372	GCA_900064725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/725/GCA_900064725.1_10771_3_34	-	2531STDY5467411
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.91094	50.7	-	CWVP01	424	5565	4761	7/16/15	2/24/17	Scaffold	SC	SAMEA3345080	GCA_001253795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/795/GCA_001253795.1_Sg_201401124_ATGTCA_L001	-	201401124_1
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.27565	68	-	LXCD01	163	7572	6941	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208755	GCA_001980045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/045/GCA_001980045.1_ASM198004v1	-	MSHR0445A
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.16242	47.6	-	MWGY01	105	4006	3852	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263869	GCA_002098535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/535/GCA_002098535.1_ASM209853v1	28219321	CISM_153
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.58448	29.4	-	FAKO01	1436	4276	4034	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664358	GCA_900007705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/705/GCA_900007705.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA304021	304021	Proteobacteria	Gammaproteobacteria	5.09946	45.3	-	LRAH01	40	4937	4695	4/4/16	3/19/17	Contig	Health Canada	SAMN04417569	GCA_001610595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/610/595/GCA_001610595.1_ASM161059v1	-	Apr-50
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.8629	57	-	LEYC01	10	5948	5677	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280323	GCA_001032525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/525/GCA_001032525.1_Kleb_pneu_CHS182_V1	-	CHS182
Enterococcus faecalis	1351	PRJNA359372	359372	Terrabacteria group	Firmicutes	3.058	37.3	-	MSQG01	127	3221	3046	4/24/17	4/26/17	Contig	Inner Mongolia Agricultural University	SAMN06190456	GCA_002108195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/195/GCA_002108195.1_ASM210819v1	-	DM7-2
Enterococcus faecium	1352	PRJNA231221	231221	Terrabacteria group	Firmicutes	3.31794	37.7	-	NJFI01	8	3454	2750	6/23/17	6/23/17	Contig	US Food and Drug Administration 	SAMN06173345	GCA_002206235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/235/GCA_002206235.1_ASM220623v1	-	FDAARGOS_332
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.708	67.5	-	CSLW01	819	3751	2983	3/23/15	3/26/17	Scaffold	SC	SAMEA751141	GCA_001207905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/905/GCA_001207905.1_5515_5_7	-	B124
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.79855	31	-	FBAP01	53	1891	1775	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683078	GCA_001492875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/875/GCA_001492875.1_H044220458	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.88772	55	-	FKEC01	70	4770	4516	4/6/16	3/28/17	Scaffold	SC	SAMEA2273166	GCA_900077135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/135/GCA_900077135.1_12045_4_42	-	e435
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.14637	64.2	-	FVTM01	21	5148	5016	3/10/17	3/18/17	Contig	SC	SAMEA2157718	GCA_900139045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/045/GCA_900139045.1_10465_1_48	-	575
Pseudomonas sp. NFPP05	1566214	PRJEB17484	351667	Proteobacteria	Gammaproteobacteria	6.99764	63.3	-	FOUH01	24	6359	6203	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159476	GCA_900114815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/815/GCA_900114815.1_IMG-taxon_2599185168_annotated_assembly	-	NFPP05
Streptomyces sp. NRRL F-5848	1463872	PRJNA238534	238534	Terrabacteria group	Actinobacteria	6.6204	72.4	-	JOGI01	2283	-	-	7/1/14	7/3/14	Scaffold	University of Illinois	SAMN02645451	GCA_000722125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/125/GCA_000722125.1_ASM72212v1	-	NRRL F-5848
Streptomyces sp. NRRL F-5638	1463866	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.42303	69.6	-	JOGL01	249	-	-	7/1/14	7/3/14	Scaffold	University of Illinois	SAMN02645454	GCA_000722155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/155/GCA_000722155.1_ASM72215v1	-	NRRL F-5638
Pseudomonas sp. ok602	1761898	PRJEB17488	351663	Proteobacteria	Gammaproteobacteria	5.28932	61.4	-	FOUL01	49	4876	4673	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487858	GCA_900114855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/114/855/GCA_900114855.1_IMG-taxon_2609459712_annotated_assembly	-	OK602
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.92088	64.2	-	FSMG01	32	4903	4779	12/14/16	3/21/17	Contig	SC	SAMEA2142489	GCA_900139075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/075/GCA_900139075.1_10465_1_54	-	610
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.20149	54.7	-	FKEF01	46	5156	4924	4/6/16	3/28/17	Scaffold	SC	SAMEA2273495	GCA_900077145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/145/GCA_900077145.1_12082_4_61	-	e440
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.80905	31.1	-	FBGB01	60	1843	1712	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683222	GCA_001492895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/895/GCA_001492895.1_M2D2	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.75679	67.7	-	CSSI01	728	3745	3097	3/23/15	3/26/17	Scaffold	SC	SAMEA751163	GCA_001208005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/005/GCA_001208005.1_5515_8_7	-	B071
Enterococcus faecium	1352	PRJNA393267	393267	Terrabacteria group	Firmicutes	3.00204	37.6	-	NKYP01	280	3088	2928	7/26/17	8/1/17	Contig	University of Sao Paulo	SAMN07326818	GCA_002233655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/655/GCA_002233655.1_ASM223365v1	-	ICBEf1B
Enterococcus faecalis	1351	PRJNA380190	380190	Terrabacteria group	Firmicutes	2.93404	37.4	-	NBDS01	131	3067	2904	4/25/17	4/27/17	Contig	Monash University 	SAMN06644789	GCA_002110325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/325/GCA_002110325.1_ASM211032v1	-	S13
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.88114	56.9	-	LEYD01	12	5970	5694	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280324	GCA_001032535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/535/GCA_001032535.1_Kleb_pneu_CHS183_V1	-	CHS183
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.12895	45.2	-	LKQK01	35	4849	4640	4/28/16	3/20/17	Contig	FDA/CFSAN	SAMN04145925	GCA_001633825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/825/GCA_001633825.1_ASM163382v1	27315090	CFSAN025062
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.20114	28.9	-	CZWQ01	897	3780	3645	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664007	GCA_900008285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/285/GCA_900008285.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.19657	47.6	-	MWHB01	118	4060	3884	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263866	GCA_002098555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/555/GCA_002098555.1_ASM209855v1	28219321	CISM_147
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.09884	68.1	-	LXCC01	191	7401	6771	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208754	GCA_001980065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/065/GCA_001980065.1_ASM198006v1	-	MSHR0296
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.66031	50.8	-	CXHU01	591	5256	4450	7/16/15	2/24/17	Scaffold	SC	SAMEA1970977	GCA_001253815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/815/GCA_001253815.1_8289_7_42	-	75676
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.35019	38.3	-	FJFS01	23	3056	2950	2/20/16	3/27/17	Contig	SC	SAMEA2077539	GCA_900064735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/735/GCA_900064735.1_10625_2_55	-	2532STDY5467528
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.14941	41.2	-	FIID01	49	2184	2042	2/10/16	3/19/17	Contig	SC	SAMEA1316556	GCA_900052525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/525/GCA_900052525.1_7114_5_8	-	LSS8
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.15403	35.4	-	LBLJ01	38	2245	2110	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435004	GCA_001018535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/535/GCA_001018535.1_ASM101853v1	25946017	USS-107
Acinetobacter baumannii 348935	1310605	PRJNA194681	194681	Proteobacteria	Gammaproteobacteria	3.41095	42.2	-	JEVW01	423	3467	3015	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02380461	GCA_000580795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/795/GCA_000580795.1_ASM58079v1	-	348935
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.94499	65.9	-	JTXY01	105	6706	6476	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105459	GCA_000796475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/475/GCA_000796475.1_AZPAE14535	25367914	AZPAE14535
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.10509	52	-	CFKJ01	179	2376	2081	3/15/15	3/21/17	Scaffold	SC	SAMEA1031650	GCA_001349115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/115/GCA_001349115.1_6714_4_24	-	NM2933
Helicobacter pylori SA156C	1345555	PRJEB4066	216025	Proteobacteria	delta/epsilon subdivisions	1.69893	39	-	CBPV01	75	1685	1501	9/21/13	3/24/17	Contig	MHH	SAMEA3138963	GCA_000604345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/345/GCA_000604345.1_SA156C	23898187	SA156C
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11933	39.7	-	CKOV01	64	2268	2031	3/21/15	3/11/17	Contig	SC	SAMEA1024719	GCA_001093605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/605/GCA_001093605.1_6680_4_15	-	type strain: N
Escherichia coli M605	656417	PRJNA39039	39039	Proteobacteria	Gammaproteobacteria	5.47795	50.4	-	ADAV01	83	5818	5308	3/15/10	2/22/17	Scaffold	Broad Institute	SAMN02595367	GCA_000176555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/555/GCA_000176555.2_ASM17655v2	-	M605
Mycobacterium tuberculosis TKK_04_0098	1448567	PRJNA235572	235572	Terrabacteria group	Actinobacteria	4.39215	65.6	-	JJUS01	86	4334	4116	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586062	GCA_000653975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/975/GCA_000653975.1_Myco_tube_TKK_04_0098_V1	-	TKK_04_0098
Bacillus cereus	1396	PRJNA309386	309386	Terrabacteria group	Firmicutes	3.63919	36.1	-	LRRS01	1437	4222	3262	2/1/16	2/1/16	Contig	PharmaSea	SAMN04432435	GCA_001543815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/815/GCA_001543815.1_ASM154381v1	-	PE5-132
Listeria monocytogenes	1639	PRJNA264516	264516	Terrabacteria group	Firmicutes	3.0866	37.8	-	JWHK01	71	3147	3057	1/5/15	2/27/17	Contig	ISCIII	SAMN03152418	GCA_000814545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/545/GCA_000814545.1_ASM81454v1	25745005	S2_3
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69008	30.3	-	CUHZ01	8	1794	1677	3/31/15	3/18/17	Contig	SC	SAMEA1010382	GCA_001234865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/865/GCA_001234865.1_7038_3_19	-	OXC6268
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20090195	1412587	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007430.2/CP007430.2	-	1	4711	4449	4/1/14	3/2/17	Chromosome	LFZ	SAMN02384308	GCA_000625675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/675/GCA_000625675.2_ASM62567v2	24786953	EC20090195
Staphylococcus aureus M0630	1388418	PRJNA216589	216589	Terrabacteria group	Firmicutes	2.88172	32.8	-	JBEH01	76	3047	2921	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325542	GCA_000527735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/735/GCA_000527735.1_Stap_aure_M0630_V1	-	M0630
Staphylococcus aureus M0631	1388419	PRJNA216590	216590	Terrabacteria group	Firmicutes	2.88808	32.8	-	JBEG01	61	3064	2892	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325543	GCA_000527755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/755/GCA_000527755.1_Stap_aure_M0631_V1	-	M0631
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20094682	1412476	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007431.2/CP007431.2	-	1	4711	4450	4/1/14	3/2/17	Chromosome	LFZ	SAMN02384197	GCA_000625695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/695/GCA_000625695.2_ASM62569v2	24786953	SA20094682
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.60632	30.4	-	CUNJ01	11	1691	1572	3/31/15	3/18/17	Contig	SC	SAMEA1010348	GCA_001234885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/885/GCA_001234885.1_7065_7_59	-	OXC6407
Listeria monocytogenes	1639	PRJNA264516	264516	Terrabacteria group	Firmicutes	2.99762	37.8	-	JWHI01	51	3054	2943	1/5/15	2/26/17	Contig	ISCIII	SAMN03152383	GCA_000814555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/555/GCA_000814555.1_ASM81455v1	25745005	S1_4
Bacillus cereus	1396	PRJNA348753	348753	Terrabacteria group	Firmicutes	3.75803	35.1	-	DFVB01	425	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06454260	GCA_002379925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/925/GCA_002379925.1_ASM237992v1	28894102	-
Mycobacterium tuberculosis TKK_04_0099	1448568	PRJNA235573	235573	Terrabacteria group	Actinobacteria	4.40589	65.6	-	JJUR01	1	4283	4113	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586063	GCA_000653995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/653/995/GCA_000653995.1_Myco_tube_TKK_04_0099_V1	-	TKK_04_0099
Escherichia coli M718	656419	PRJNA39043	39043	Proteobacteria	Gammaproteobacteria	5.4132	50.5	-	ADAW01	67	5628	5066	3/15/10	2/22/17	Scaffold	Broad Institute	SAMN02595368	GCA_000176575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/575/GCA_000176575.2_ASM17657v2	-	M718
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.1356	39.6	-	CNXY02	168	2361	2138	3/23/15	3/11/17	Contig	SC	SAMEA1463204	GCA_001093685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/685/GCA_001093685.2_7553_4_14	-	ND6133
Helicobacter pylori SA227C	1345521	PRJEB4120	215918	Proteobacteria	delta/epsilon subdivisions	1.66498	39.1	-	CBNL01	64	1649	1461	9/21/13	3/24/17	Contig	MHH	SAMEA3138964	GCA_000604405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/405/GCA_000604405.1_SA227C	23898187	SA227C
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05729	52	-	CFHX01	178	2318	2051	3/15/15	3/21/17	Scaffold	SC	SAMEA1031659	GCA_001349155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/155/GCA_001349155.1_6714_4_21	-	NM2856
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.26767	66.5	-	JTXX01	78	5926	5745	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105460	GCA_000796505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/505/GCA_000796505.1_AZPAE14538	25367914	AZPAE14538
Acinetobacter baumannii 1035119	1310622	PRJNA194698	194698	Proteobacteria	Gammaproteobacteria	3.92867	39	-	JEVY01	55	3747	3530	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02380463	GCA_000580815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/815/GCA_000580815.1_ASM58081v1	-	1035119
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.15509	35.4	-	LBLK01	51	2276	2093	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435005	GCA_001018555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/555/GCA_001018555.1_ASM101855v1	25946017	BE-PW-051
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.0021	41.4	-	FILO01	41	1986	1854	2/10/16	3/19/17	Contig	SC	SAMEA1316518	GCA_900052535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/535/GCA_900052535.1_7054_7_64	-	SS981
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.41007	38.3	-	FJHH01	21	3120	3011	2/20/16	3/27/17	Contig	SC	SAMEA2080607	GCA_900064745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/745/GCA_900064745.1_10625_2_14	-	2532STDY5467487
Shigella sonnei	624	PRJEB2460	204320	Proteobacteria	Gammaproteobacteria	4.68445	50.7	-	CXGU01	473	5434	4469	7/16/15	2/24/17	Scaffold	SC	SAMEA1027696	GCA_001253855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/855/GCA_001253855.1_7353_1_24	-	H113080358
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.04776	68.2	-	LXCB01	316	7328	6678	1/31/17	4/29/17	Contig	Northern Arizona University	SAMN04208753	GCA_001980075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/075/GCA_001980075.1_ASM198007v1	-	MSHR0120
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.19421	47.6	-	MWHC01	95	4049	3899	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263865	GCA_002098595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/595/GCA_002098595.1_ASM209859v1	28219321	CISM_146
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.28556	29.1	-	CZXJ01	1545	3892	3643	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3663997	GCA_900008305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/305/GCA_900008305.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.12698	45.2	-	LKQN01	44	4845	4648	4/28/16	3/20/17	Contig	FDA/CFSAN	SAMN04145928	GCA_001633835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/835/GCA_001633835.1_ASM163383v1	27315090	CFSAN025065
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.91595	57	-	LEYE01	12	6013	5721	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280325	GCA_001032545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/545/GCA_001032545.1_Kleb_pneu_CHS184_V1	-	CHS184
Enterococcus faecalis	1351	PRJNA380190	380190	Terrabacteria group	Firmicutes	2.86038	37.6	-	NBDT01	228	2864	2735	4/25/17	4/27/17	Contig	Monash University 	SAMN06644811	GCA_002110335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/335/GCA_002110335.1_S17	-	S17
Enterococcus faecium	1352	PRJNA391732	391732	Terrabacteria group	Firmicutes	2.95503	37.7	-	NLCT01	404	3060	2840	8/21/17	8/23/17	Contig	University of Pittsburgh School of Medicine	SAMN07274325	GCA_002260625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/625/GCA_002260625.1_VRE2016-194	-	VRE2016-194
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.73134	67.6	-	CSRU01	1064	3784	3005	3/23/15	3/26/17	Scaffold	SC	SAMEA751350	GCA_001208065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/065/GCA_001208065.1_5476_3_2	-	B096
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.67985	31.3	-	FBKX01	18	1727	1640	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683350	GCA_001492935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/935/GCA_001492935.1_p474B	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.58823	55.2	-	FKEE01	21	4423	4243	4/6/16	3/28/17	Scaffold	SC	SAMEA2273169	GCA_900077155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/155/GCA_900077155.1_12045_4_45	-	e448
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.17955	64.1	-	FSMF01	21	5211	5099	12/14/16	3/21/17	Contig	SC	SAMEA2148616	GCA_900139085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/085/GCA_900139085.1_10465_1_55	-	617
Pseudomonas sp. NFACC24-1	1566189	PRJEB17144	351386	Proteobacteria	Gammaproteobacteria	6.63784	61.1	-	FOVS01	95	5921	5658	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159304	GCA_900115235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/235/GCA_900115235.1_IMG-taxon_2599185319_annotated_assembly	-	NFACC24-1
Streptomyces sp. NRRL B-16215	1415550	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.0971	69.3	-	JOGM01	547	-	-	7/1/14	7/3/14	Scaffold	University of Illinois	SAMN02645455	GCA_000722175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/175/GCA_000722175.1_ASM72217v1	-	NRRL B-16215
Streptomyces sp. NRRL S-1777	1463887	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.08838	70	-	JOGY01	237	-	-	7/1/14	7/3/14	Scaffold	University of Illinois	SAMN02645467	GCA_000722215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/215/GCA_000722215.1_ASM72221v1	-	NRRL S-1777
Pseudomonas sp. NFPP07	1566213	PRJEB17367	351544	Proteobacteria	Gammaproteobacteria	6.65227	62.9	-	FOXG01	28	6067	5878	10/31/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159489	GCA_900115645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/645/GCA_900115645.1_IMG-taxon_2599185185_annotated_assembly	-	NFPP07
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.90789	64.1	-	FVTO01	10	4915	4801	3/10/17	3/18/17	Contig	SC	SAMEA2158812	GCA_900139095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/095/GCA_900139095.1_10465_1_53	-	609
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.35047	55.3	-	FKEM01	65	5383	5102	4/6/16	3/28/17	Scaffold	SC	SAMEA2273171	GCA_900077165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/165/GCA_900077165.1_12045_4_47	-	e456
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.81398	31	-	FAYN01	68	1904	1778	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683015	GCA_001492975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/975/GCA_001492975.1_H120880380	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.76461	67.7	-	CSOS01	785	3804	3096	3/23/15	3/26/17	Scaffold	SC	SAMEA751507	GCA_001208145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/145/GCA_001208145.1_5476_7_11	-	B045
Enterococcus faecium	1352	PRJNA391732	391732	Terrabacteria group	Firmicutes	2.98177	37.7	-	NLCQ01	516	3134	2834	8/21/17	8/23/17	Contig	University of Pittsburgh School of Medicine	SAMN07274322	GCA_002260765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/765/GCA_002260765.1_VRE2014-195	-	VRE2014-195
Enterococcus faecalis	1351	PRJNA380190	380190	Terrabacteria group	Firmicutes	2.85338	37.5	-	NBDU01	106	2856	2752	4/25/17	4/27/17	Contig	Monash University 	SAMN06644838	GCA_002110385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/385/GCA_002110385.1_ASM211038v1	-	S16
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.68389	56.9	-	LEYF01	7	5778	5496	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280326	GCA_001032585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/585/GCA_001032585.1_Kleb_pneu_CHS185_V1	-	CHS185
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.22071	45.2	-	LKQL01	35	4959	4764	4/28/16	3/20/17	Contig	FDA/CFSAN	SAMN04145926	GCA_001633845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/845/GCA_001633845.1_ASM163384v1	27315090	CFSAN025063
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.32686	28.9	-	CZXF01	1490	3947	3711	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664020	GCA_900008315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/315/GCA_900008315.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.03204	47.5	-	MWHE01	108	3805	3674	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263863	GCA_002098605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/605/GCA_002098605.1_ASM209860v1	28219321	CISM_122
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.18646	68.1	-	LXCE01	171	7460	6858	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208756	GCA_001980105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/105/GCA_001980105.1_ASM198010v1	-	MSHR0911
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.77017	50.6	-	CXJR01	393	5408	4624	7/16/15	2/24/17	Scaffold	SC	SAMEA2003431	GCA_001253875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/875/GCA_001253875.1_8290_4_3	-	93028
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.53966	38.3	-	FJIV01	58	3240	3089	2/20/16	3/27/17	Contig	SC	SAMEA2077790	GCA_900064755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/755/GCA_900064755.1_10625_3_10	-	2532STDY5467579
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.21589	41	-	FIHR01	33	2251	2082	2/10/16	3/19/17	Contig	SC	SAMEA1316522	GCA_900052825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/825/GCA_900052825.1_7114_5_68	-	LSS68
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.09587	35.5	-	LBLL01	36	2172	1993	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03435007	GCA_001018565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/565/GCA_001018565.1_ASM101856v1	25946017	BE-PW-080
Acinetobacter baumannii 1159076	1310644	PRJNA194720	194720	Proteobacteria	Gammaproteobacteria	4.24684	39	-	JEWA01	301	4360	3943	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02380497	GCA_000580835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/835/GCA_000580835.1_ASM58083v1	-	1159076
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.57667	66.2	-	JUAW01	120	6323	6010	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105383	GCA_000796525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/525/GCA_000796525.1_AZPAE12138	25367914	AZPAE12138
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.06259	52.1	-	CHII01	156	2317	2061	4/21/15	3/21/17	Scaffold	SC	SAMEA1031677	GCA_001349175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/175/GCA_001349175.1_6714_2_2	-	NM1805
Helicobacter pylori	210	PRJNA245354	245354	Proteobacteria	delta/epsilon subdivisions	1.6404	39	-	JMGL01	56	1610	1453	5/12/14	3/24/17	Contig	Penn State University	SAMN02736909	GCA_000688915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/915/GCA_000688915.1_J166output_6moB	24924186	J166output_6moB
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10256	39.7	-	CLVJ01	70	2355	2139	3/21/15	3/11/17	Contig	SC	SAMEA1026260	GCA_001093785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/785/GCA_001093785.1_6983_3_65	-	SMRU2273
Escherichia coli TA206	656440	PRJNA39085	39085	Proteobacteria	Gammaproteobacteria	5.12224	50.5	-	ADAX01	38	5288	4793	3/15/10	2/22/17	Scaffold	Broad Institute	SAMN02595369	GCA_000176595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/595/GCA_000176595.2_ASM17659v2	-	TA206
Mycobacterium tuberculosis TKK_04_0103	1448569	PRJNA235574	235574	Terrabacteria group	Actinobacteria	4.40311	65.6	-	JJUQ01	66	4307	4117	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586064	GCA_000654015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/015/GCA_000654015.1_Myco_tube_TKK_04_0103_V1	-	TKK_04_0103
Listeria monocytogenes	1639	PRJNA264516	264516	Terrabacteria group	Firmicutes	3.11216	37.8	-	JWHJ01	52	3194	3102	1/5/15	2/27/17	Contig	ISCIII	SAMN03152387	GCA_000814565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/565/GCA_000814565.1_ASM81456v1	25745005	S2_2
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.7188	30.3	-	CUSN01	26	1788	1631	3/31/15	3/18/17	Contig	SC	SAMEA1010568	GCA_001234945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/945/GCA_001234945.1_7092_1_94	-	OXC6541
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20100131	1412584	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007432.2/CP007432.2	-	1	4706	4448	4/1/14	3/2/17	Chromosome	LFZ	SAMN02384305	GCA_000625715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/715/GCA_000625715.2_ASM62571v2	24786953	EC20100131
Staphylococcus aureus M0632	1388420	PRJNA216591	216591	Terrabacteria group	Firmicutes	2.84755	32.8	-	JBEF01	34	3001	2835	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325544	GCA_000527795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/795/GCA_000527795.1_Stap_aure_M0632_V1	-	M0632
Staphylococcus aureus M0634	1388421	PRJNA216592	216592	Terrabacteria group	Firmicutes	2.89208	32.9	-	JBEE01	37	3049	2872	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325545	GCA_000527815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/815/GCA_000527815.1_Stap_aure_M0634_V1	-	M0634
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20100239	1412481	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007427.1/CP007427.2	-	1	4709	4449	4/1/14	3/2/17	Chromosome	LFZ	SAMN02384202	GCA_000625735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/735/GCA_000625735.2_ASM62573v2	24786953	SA20100239
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70511	30.4	-	CUVN01	22	1822	1728	3/31/15	3/18/17	Contig	SC	SAMEA1400795	GCA_001235005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/005/GCA_001235005.1_7213_3_82	-	OXC6627
Listeria monocytogenes	1639	PRJNA264516	264516	Terrabacteria group	Firmicutes	3.00975	37.9	-	JWHG01	70	3043	2957	1/5/15	2/27/17	Contig	ISCIII	SAMN03152360	GCA_000814575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/575/GCA_000814575.1_ASM81457v1	25745005	S10_1
Mycobacterium tuberculosis TKK_04_0105	1448570	PRJNA235575	235575	Terrabacteria group	Actinobacteria	4.40209	65.6	-	JJUP01	1	4271	4107	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586065	GCA_000654035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/035/GCA_000654035.1_Myco_tube_TKK_04_0105_V1	-	TKK_04_0105
Escherichia coli TA143	656437	PRJNA39079	39079	Proteobacteria	Gammaproteobacteria	4.88915	50.5	-	ADAY01	43	4963	4538	3/15/10	2/22/17	Scaffold	Broad Institute	SAMN02595370	GCA_000176615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/615/GCA_000176615.2_ASM17661v2	-	TA143
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08522	39.8	-	CKRE01	65	2257	2023	3/21/15	3/11/17	Contig	SC	SAMEA1025019	GCA_001093805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/805/GCA_001093805.1_6680_7_15	-	SMRU975
Helicobacter pylori	210	PRJNA245351	245351	Proteobacteria	delta/epsilon subdivisions	1.63043	38.9	-	JMGI01	47	1600	1440	5/12/14	3/24/17	Contig	Penn State University	SAMN02736906	GCA_000688935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/935/GCA_000688935.1_J166output_2moB	24924186	J166output_2moB
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.12056	51.9	-	CFJB01	141	2399	2102	3/15/15	3/21/17	Scaffold	SC	SAMEA1031680	GCA_001349195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/195/GCA_001349195.1_6714_1_8	-	NM1364
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.82616	66.1	-	JUAZ01	190	6653	6330	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105380	GCA_000796545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/545/GCA_000796545.1_AZPAE12135	25367914	AZPAE12135
Acinetobacter baumannii 1295743	1310613	PRJNA194689	194689	Proteobacteria	Gammaproteobacteria	4.32289	39.3	-	JEWH01	199	4311	3867	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02380504	GCA_000580875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/875/GCA_000580875.1_ASM58087v1	-	1295743
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.21109	35.7	-	LBHI01	124	2356	2070	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03434996	GCA_001018575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/575/GCA_001018575.1_ASM101857v1	25946017	DK-B-USS-146
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.13339	41	-	FIOY01	23	2153	2033	2/10/16	3/19/17	Contig	SC	SAMEA1566091	GCA_900052835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/835/GCA_900052835.1_8337_6_73	-	EN399
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54103	38.3	-	FJKI01	56	3239	3088	2/20/16	3/27/17	Contig	SC	SAMEA2077759	GCA_900064765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/765/GCA_900064765.1_10625_3_21	-	2532STDY5467590
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.54275	50.9	-	CXDM01	394	4823	4290	7/16/15	2/24/17	Scaffold	SC	SAMEA954799	GCA_001253895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/895/GCA_001253895.1_5236_7_9	-	Sh476_441046
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.23309	68.1	-	LXCF01	141	7500	6889	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208757	GCA_001980125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/125/GCA_001980125.1_ASM198012v1	-	MSHR2825
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.19437	47.6	-	MWHD01	92	4058	3888	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263864	GCA_002098625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/625/GCA_002098625.1_ASM209862v1	28219321	CISM_134
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.31333	29.6	-	CZXG01	1623	3918	3672	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664017	GCA_900008325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/325/GCA_900008325.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.13232	45.2	-	LKQO01	39	4844	4646	4/28/16	3/20/17	Contig	FDA/CFSAN	SAMN04145929	GCA_001633855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/855/GCA_001633855.1_ASM163385v1	27315090	CFSAN025066
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.7048	56.8	-	LEYG01	8	5771	5497	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280327	GCA_001032605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/605/GCA_001032605.1_Kleb_pneu_CHS186_V1	-	CHS186
Enterococcus faecalis	1351	PRJNA380190	380190	Terrabacteria group	Firmicutes	3.00079	37.3	-	NBDR01	137	3089	2924	4/25/17	4/27/17	Contig	Monash University 	SAMN06629170	GCA_002110425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/425/GCA_002110425.1_ASM211042v1	-	S12
Enterococcus faecium	1352	PRJNA391732	391732	Terrabacteria group	Firmicutes	3.04759	37.6	-	NLCP01	383	3144	2903	8/21/17	8/23/17	Contig	University of Pittsburgh School of Medicine	SAMN07274321	GCA_002260775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/775/GCA_002260775.1_VRE2014-7	-	VRE2014-7
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.76735	67.6	-	CSOT01	719	3806	3092	3/23/15	3/26/17	Scaffold	SC	SAMEA1931868	GCA_001208185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/185/GCA_001208185.1_5463_5_11	-	B156
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.69963	31.3	-	FBKF01	28	1781	1675	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683331	GCA_001492995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/995/GCA_001492995.1_p474C	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.14598	54.6	-	FKEK01	66	5059	4793	4/6/16	3/28/17	Scaffold	SC	SAMEA2273172	GCA_900077175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/175/GCA_900077175.1_12045_4_48	-	e458
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18766	64.2	-	FSMH01	26	5195	5048	12/14/16	3/21/17	Contig	SC	SAMEA2153896	GCA_900139105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/105/GCA_900139105.1_10465_1_56	-	641
Pseudomonas sp. NFIX49	1566233	PRJEB17500	351694	Proteobacteria	Gammaproteobacteria	6.37765	60.6	-	FOYE01	18	5779	5635	10/30/16	8/2/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159312	GCA_900115915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/115/915/GCA_900115915.1_IMG-taxon_2603880199_annotated_assembly	-	NFIX49
Streptomyces sp. NRRL S-1833	1463891	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.57867	68.8	-	JOHC01	395	-	-	7/1/14	7/3/14	Scaffold	University of Illinois	SAMN02645471	GCA_000722235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/235/GCA_000722235.1_ASM72223v1	-	NRRL S-1833
Streptomyces sp. NRRL B-2030	1463830	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.89462	68.9	-	JOHH01	466	-	-	7/1/14	7/3/14	Scaffold	University of Illinois	SAMN02645476	GCA_000722275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/275/GCA_000722275.1_ASM72227v1	-	NRRL B-2030
Pseudomonas sp. NFACC42-2	1566193	PRJEB17556	352017	Proteobacteria	Gammaproteobacteria	6.51272	61.3	-	FOZO01	45	6048	5866	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159318	GCA_900116055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/055/GCA_900116055.1_IMG-taxon_2599185303_annotated_assembly	-	NFACC42-2
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15341	64.1	-	FSMI01	20	5179	5078	12/14/16	3/21/17	Contig	SC	SAMEA2155126	GCA_900139115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/115/GCA_900139115.1_10465_1_57	-	644
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.14887	54.9	-	FKEI01	70	5091	4825	4/6/16	3/28/17	Scaffold	SC	SAMEA2273170	GCA_900077185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/185/GCA_900077185.1_12045_4_46	-	e452
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.76405	31.1	-	FBHL01	26	1855	1749	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683260	GCA_001493015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/015/GCA_001493015.1_NCTC11437	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.64647	67.4	-	CSOY01	1181	3732	2888	3/22/15	3/26/17	Scaffold	SC	SAMEA751136	GCA_001208205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/205/GCA_001208205.1_5515_5_2	-	B116
Enterococcus faecium	1352	PRJNA391732	391732	Terrabacteria group	Firmicutes	2.86235	37.8	-	NLCR01	376	2949	2754	8/21/17	8/23/17	Contig	University of Pittsburgh School of Medicine	SAMN07274323	GCA_002260815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/815/GCA_002260815.1_VRE2015-149	-	VRE2015-149
Enterococcus faecalis	1351	PRJNA231221	231221	Terrabacteria group	Firmicutes	3.17546	37.2	-	NJFO01	4	3357	2659	6/23/17	6/23/17	Contig	US Food and Drug Administration 	SAMN06173360	GCA_002206315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/315/GCA_002206315.1_ASM220631v1	-	FDAARGOS_347
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.6111	57.2	-	LEYH01	10	5665	5410	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280330	GCA_001032615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/615/GCA_001032615.1_Kleb_pneu_CHS189_V1	-	CHS189
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.13098	45.2	-	LKQP01	45	4860	4648	4/28/16	3/20/17	Contig	FDA/CFSAN	SAMN04145930	GCA_001633905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/905/GCA_001633905.1_ASM163390v1	27315090	CFSAN025067
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.26675	28.8	-	CZXL01	1345	3948	3732	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664018	GCA_900008335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/335/GCA_900008335.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.03407	47.5	-	MWHF01	101	3845	3688	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263862	GCA_002098655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/655/GCA_002098655.1_ASM209865v1	28219321	CISM_121
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.23087	68.1	-	LXCG01	119	7502	6907	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208758	GCA_001980145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/145/GCA_001980145.1_ASM198014v1	-	MSHR3499
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.59519	50.8	-	CXBH01	402	4903	4425	7/16/15	2/24/17	Scaffold	SC	SAMEA954863	GCA_001253915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/915/GCA_001253915.1_5236_1_2	-	ShIB696_440728
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.4108	38.2	-	FJDZ01	25	3125	3027	2/20/16	3/27/17	Contig	SC	SAMEA2065583	GCA_900065305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/305/GCA_900065305.1_10208_4_36	-	2531STDY5467413
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04842	41.2	-	FIQE01	21	2064	1958	2/10/16	3/19/17	Contig	SC	SAMEA1566096	GCA_900052845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/845/GCA_900052845.1_8525_5_40	-	SS36
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.12887	35.6	-	LBHH01	19	2172	2046	6/2/15	3/17/17	Contig	Novartis Vaccines	SAMN03434995	GCA_001018615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/615/GCA_001018615.1_ASM101861v1	25946017	DK-B-USS-084
Acinetobacter baumannii 1397084	1310614	PRJNA194690	194690	Proteobacteria	Gammaproteobacteria	3.91651	39.1	-	JEWJ01	311	3951	3600	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02380506	GCA_000580895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/895/GCA_000580895.1_ASM58089v1	-	1397084
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.30351	66.5	-	JUAY01	88	5922	5739	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105381	GCA_000796555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/555/GCA_000796555.1_AZPAE12136	25367914	AZPAE12136
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.08323	52	-	CHIJ01	163	2336	2066	4/21/15	3/21/17	Scaffold	SC	SAMEA1031697	GCA_001349235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/235/GCA_001349235.1_6714_4_13	-	NM2718
Helicobacter pylori	210	PRJNA245353	245353	Proteobacteria	delta/epsilon subdivisions	1.63402	38.9	-	JMGK01	50	1611	1445	5/12/14	3/24/17	Contig	Penn State University	SAMN02736908	GCA_000688955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/955/GCA_000688955.1_J166output_6moA	24924186	J166output_6moA
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08287	39.6	-	CLDP01	75	2260	2034	3/21/15	3/11/17	Contig	SC	SAMEA1025902	GCA_001094005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/005/GCA_001094005.1_6899_5_19	-	SMRU2059
Escherichia coli TA271	656443	PRJNA39091	39091	Proteobacteria	Gammaproteobacteria	5.07582	50.7	-	ADAZ01	83	5300	4676	3/16/10	8/8/17	Scaffold	Broad Institute	SAMN02595371	GCA_000176635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/635/GCA_000176635.2_ASM17663v2	-	TA271
Mycobacterium tuberculosis TKK_04_0106	1448571	PRJNA235576	235576	Terrabacteria group	Actinobacteria	4.40146	65.6	-	JJUO01	1	4281	4113	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586066	GCA_000654055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/055/GCA_000654055.1_Myco_tube_TKK_04_0106_V1	-	TKK_04_0106
Listeria monocytogenes	1639	PRJNA264516	264516	Terrabacteria group	Firmicutes	3.11403	37.8	-	JWHH01	73	3184	3090	1/5/15	2/27/17	Contig	ISCIII	SAMN03152384	GCA_000814625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/625/GCA_000814625.1_ASM81462v1	25745005	S10_3
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69212	30.4	-	CUSU01	21	1777	1667	3/31/15	3/18/17	Contig	SC	SAMEA1401429	GCA_001235045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/045/GCA_001235045.1_7213_3_13	-	OXC6556
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120677	1412559	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007428.1/CP007428.2	-	1	4708	4448	4/1/14	3/2/17	Chromosome	LFZ	SAMN02384280	GCA_000625755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/755/GCA_000625755.2_ASM62575v2	24786953	EC20120677
Staphylococcus aureus M0636	1388422	PRJNA216593	216593	Terrabacteria group	Firmicutes	2.90778	32.7	-	JBED01	66	3095	2950	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325546	GCA_000527835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/835/GCA_000527835.1_Stap_aure_M0636_V1	-	M0636
Staphylococcus aureus M0637	1388423	PRJNA216594	216594	Terrabacteria group	Firmicutes	2.92019	32.9	-	JBEC01	54	3086	2913	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325547	GCA_000527855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/855/GCA_000527855.1_Stap_aure_M0637_V1	-	M0637
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121765	1412555	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007429.2/CP007429.2	-	1	4707	4449	4/1/14	3/2/17	Chromosome	LFZ	SAMN02384276	GCA_000625775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/775/GCA_000625775.2_ASM62577v2	24786953	EC20121765
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.73287	30.2	-	CUIW01	17	1832	1709	3/31/15	3/18/17	Contig	SC	SAMEA1010545	GCA_001235065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/065/GCA_001235065.1_7038_3_41	-	OXC6291
Listeria monocytogenes	1639	PRJNA276578	276578	Terrabacteria group	Firmicutes	2.89436	37.9	-	JYOS01	36	2974	2870	3/23/15	2/27/17	Contig	University of Veterinary Medicine Vienna	SAMN03378795	GCA_000960145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/145/GCA_000960145.1_ASM96014v1	-	14KSM
Mycobacterium tuberculosis TKK_04_0107	1448572	PRJNA235577	235577	Terrabacteria group	Actinobacteria	4.38835	65.6	-	JJUN01	78	4321	4114	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586067	GCA_000654075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/075/GCA_000654075.1_Myco_tube_TKK_04_0107_V1	-	TKK_04_0107
Escherichia coli TA280	656444	PRJNA39093	39093	Proteobacteria	Gammaproteobacteria	5.29694	50.6	-	ADBA01	76	5549	4958	3/16/10	4/21/17	Scaffold	Broad Institute	SAMN02595372	GCA_000176655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/655/GCA_000176655.2_ASM17665v2	-	TA280
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12302	39.6	-	CNOU02	171	2340	2131	3/23/15	3/11/17	Contig	SC	SAMEA1032467	GCA_001094045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/045/GCA_001094045.2_6930_8_16	-	R34-3022
Helicobacter pylori	210	PRJNA245355	245355	Proteobacteria	delta/epsilon subdivisions	1.63437	38.9	-	JMGM01	51	1614	1445	5/12/14	3/24/17	Contig	Penn State University	SAMN02736910	GCA_000688975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/975/GCA_000688975.1_J166output_6moC	24924186	J166output_6moC
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05118	52.1	-	CIKO01	167	2285	2026	4/21/15	3/21/17	Scaffold	SC	SAMEA1031710	GCA_001349255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/255/GCA_001349255.1_6714_3_24	-	NM2394
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.30425	66.5	-	JUAX01	82	5967	5769	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105382	GCA_000796585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/585/GCA_000796585.1_AZPAE12137	25367914	AZPAE12137
Acinetobacter baumannii 1437282	1310638	PRJNA194714	194714	Proteobacteria	Gammaproteobacteria	3.9548	43	-	JEWN01	35	3790	3625	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02380510	GCA_000580915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/915/GCA_000580915.1_ASM58091v1	-	1437282
Streptococcus agalactiae	1311	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.19549	35.6	-	JVKH01	86	2242	2097	7/10/15	3/17/17	Contig	University of Washington	SAMN03197547	GCA_001070935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/070/935/GCA_001070935.1_ASM107093v1	26230489	357_SAGA
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.10839	41	-	FIQC01	27	2115	2001	2/10/16	3/19/17	Contig	SC	SAMEA1566052	GCA_900052855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/855/GCA_900052855.1_8525_5_43	-	SS40
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.385	38.3	-	FJEB01	21	3072	2950	2/20/16	3/27/17	Contig	SC	SAMEA2065095	GCA_900065315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/315/GCA_900065315.1_10771_3_38	-	2531STDY5467415
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.35443	50.8	-	CXCI01	371	4628	4150	7/16/15	2/24/17	Scaffold	SC	SAMEA954550	GCA_001253935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/935/GCA_001253935.1_5236_3_4	-	ShIB2026_440828
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.46264	67.8	-	LXCH01	346	7801	7072	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208759	GCA_001980155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/155/GCA_001980155.1_ASM198015v1	-	MSHR3662
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.03665	47.5	-	MWHG01	100	3840	3684	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263861	GCA_002098675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/675/GCA_002098675.1_ASM209867v1	28219321	CISM_120
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.30151	29.1	-	CZYB01	1666	3850	3648	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664034	GCA_900008345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/345/GCA_900008345.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.12555	45.2	-	LKQQ01	69	4857	4641	4/28/16	3/20/17	Contig	FDA/CFSAN	SAMN04145931	GCA_001633915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/915/GCA_001633915.1_ASM163391v1	27315090	CFSAN025068
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.8741	56.9	-	LEYI01	8	5931	5659	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280332	GCA_001032625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/625/GCA_001032625.1_Kleb_pneu_CHS191_V1	-	CHS191
Enterococcus faecalis	1351	PRJNA231221	231221	Terrabacteria group	Firmicutes	3.12938	37.2	-	NJFK01	3	3226	2956	6/23/17	6/26/17	Contig	US Food and Drug Administration 	SAMN06173352	GCA_002206545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/545/GCA_002206545.1_ASM220654v1	-	FDAARGOS_339
Enterococcus faecium	1352	PRJNA391732	391732	Terrabacteria group	Firmicutes	2.92106	37.7	-	NLCS01	372	3029	2820	8/21/17	8/23/17	Contig	University of Pittsburgh School of Medicine	SAMN07274324	GCA_002260825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/825/GCA_002260825.1_VRE2016-78	-	VRE2016-78
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.7308	67.6	-	CSOO01	998	3783	3022	3/22/15	3/26/17	Scaffold	SC	SAMEA751261	GCA_001208285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/285/GCA_001208285.1_5633_3_11	-	B337
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75066	31.2	-	FBCM01	20	1832	1747	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683125	GCA_001493055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/055/GCA_001493055.1_EC4258	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.89185	55.5	-	FKEJ01	39	4823	4595	4/6/16	3/28/17	Scaffold	SC	SAMEA2273471	GCA_900077195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/195/GCA_900077195.1_12045_5_51	-	e473
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.07103	64.1	-	FSMK01	13	5072	4975	12/14/16	3/21/17	Contig	SC	SAMEA2142729	GCA_900139125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/125/GCA_900139125.1_10465_1_59	-	656
Pseudomonas sp. NFACC48-1	1566223	PRJEB17537	351985	Proteobacteria	Gammaproteobacteria	6.77562	60.7	-	FPAL01	36	6122	5920	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159306	GCA_900116305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/305/GCA_900116305.1_IMG-taxon_2599185291_annotated_assembly	-	NFACC48-1
Streptomyces sp. NRRL B-2790	1463835	PRJNA238534	238534	Terrabacteria group	Actinobacteria	11.1663	68.9	-	JOHI01	410	-	-	7/1/14	7/3/14	Scaffold	University of Illinois	SAMN02645477	GCA_000722295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/295/GCA_000722295.1_ASM72229v1	-	NRRL B-2790
Streptomyces sp. NRRL B-2375	1463831	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.03368	69.9	-	JOHK01	332	-	-	7/1/14	7/3/14	Scaffold	University of Illinois	SAMN02645479	GCA_000722305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/305/GCA_000722305.1_ASM72230v1	-	NRRL B-2375
Pseudomonas sp. NFPP25	1566232	PRJEB17563	352010	Proteobacteria	Gammaproteobacteria	6.84401	63.5	-	FPBG01	21	6271	6136	11/2/16	8/3/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159492	GCA_900116505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/116/505/GCA_900116505.1_IMG-taxon_2599185160_annotated_assembly	-	NFPP25
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.0753	64.1	-	FSMJ01	21	5073	4968	12/14/16	3/21/17	Contig	SC	SAMEA2154643	GCA_900139135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/135/GCA_900139135.1_10465_1_58	-	653
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.30325	55.4	-	FKEG01	28	5194	4993	4/6/16	3/28/17	Scaffold	SC	SAMEA2273177	GCA_900077215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/215/GCA_900077215.1_12045_4_52	-	e483
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75494	31.2	-	FBDL01	31	1847	1751	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683150	GCA_001493075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/075/GCA_001493075.1_EC5992	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.81945	67.9	-	CSOL01	585	3782	3238	3/22/15	3/26/17	Scaffold	SC	SAMEA751177	GCA_001208905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/905/GCA_001208905.1_5601_5_4	-	B310
Enterococcus faecium	1352	PRJNA393251	393251	Terrabacteria group	Firmicutes	3.3706	37.6	-	NMZH01	4	3546	3259	8/22/17	8/24/17	Contig	University of Tromso	SAMN07326775	GCA_002263115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/115/GCA_002263115.1_ASM226311v1	-	K59-68
Enterococcus faecalis	1351	PRJNA381315	381315	Terrabacteria group	Firmicutes	2.94529	37.3	-	NCAD01	113	3007	2868	8/14/17	8/16/17	Contig	Universidad Nacional de Colombia	SAMN06052011	GCA_002250145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/145/GCA_002250145.1_ASM225014v1	-	IBUN9046YE
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.83199	57	-	LEYJ01	10	5909	5623	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280333	GCA_001032665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/665/GCA_001032665.1_Kleb_pneu_CHS192_V1	-	CHS192
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.12282	45.2	-	LKQR01	112	4838	4627	4/28/16	3/20/17	Contig	FDA/CFSAN	SAMN04145932	GCA_001633935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/935/GCA_001633935.1_ASM163393v1	27315090	CFSAN029653
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.48398	29.1	-	CZYY01	1455	4306	3978	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664057	GCA_900008365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/365/GCA_900008365.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.19583	47.6	-	MWHH01	124	4031	3890	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263860	GCA_002098695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/695/GCA_002098695.1_ASM209869v1	28219321	CISM_105
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.32783	68	-	LXCI01	137	7616	7016	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208760	GCA_001980175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/175/GCA_001980175.1_ASM198017v1	-	MSHR3841
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.79815	50.7	-	CXJU01	417	5454	4644	7/16/15	2/24/17	Scaffold	SC	SAMEA2003434	GCA_001253955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/955/GCA_001253955.1_8290_4_18	-	95776
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.31852	38.2	-	FJBX01	28	3029	2930	2/20/16	3/27/17	Contig	SC	SAMEA2058465	GCA_900065435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/435/GCA_900065435.1_10771_1_52	-	2531STDY5467333
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05348	41.1	-	FIQT01	25	2063	1950	2/10/16	3/19/17	Contig	SC	SAMEA1566076	GCA_900052865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/865/GCA_900052865.1_8525_5_58	-	SS83
Streptococcus agalactiae	1311	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.00429	35.2	-	JVJV01	28	2023	1934	7/10/15	3/17/17	Contig	University of Washington	SAMN03197559	GCA_001072615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/615/GCA_001072615.1_ASM107261v1	26230489	369_SAGA
Acinetobacter baumannii 1462234	1310646	PRJNA194722	194722	Proteobacteria	Gammaproteobacteria	4.34004	38.9	-	JEWR01	476	4485	4038	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02380514	GCA_000580935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/935/GCA_000580935.1_ASM58093v1	-	1462234
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.03936	65.9	-	JTWP01	153	6748	6454	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105494	GCA_000796605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/605/GCA_000796605.1_AZPAE14717	25367914	AZPAE14717
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.07508	52	-	CFIH01	171	2329	2038	3/15/15	3/21/17	Scaffold	SC	SAMEA1031712	GCA_001349275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/275/GCA_001349275.1_6714_4_14	-	NM2808
Helicobacter pylori	210	PRJNA245343	245343	Proteobacteria	delta/epsilon subdivisions	1.63455	38.9	-	JMGD01	47	1609	1448	5/12/14	3/24/17	Contig	Penn State University	SAMN02736897	GCA_000688995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/995/GCA_000688995.1_J166output_1wkC	24924186	J166output_1wkC
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11659	39.6	-	CLCM01	83	2270	1995	3/21/15	3/11/17	Contig	SC	SAMEA1026014	GCA_001094065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/065/GCA_001094065.1_6899_4_13	-	SMRU2029
Escherichia coli H591	656408	PRJNA39021	39021	Proteobacteria	Gammaproteobacteria	4.9778	50.7	-	ADBB01	82	5226	4793	3/16/10	2/22/17	Scaffold	Broad Institute	SAMN02595373	GCA_000176675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/675/GCA_000176675.2_ASM17667v2	-	H591
Mycobacterium tuberculosis TKK_04_0109	1448574	PRJNA235579	235579	Terrabacteria group	Actinobacteria	4.40025	65.6	-	JJUL01	1	4278	4112	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586069	GCA_000654095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/095/GCA_000654095.1_Myco_tube_TKK_04_0109_V1	-	TKK_04_0109
Listeria monocytogenes	1639	PRJNA276579	276579	Terrabacteria group	Firmicutes	2.91461	37.9	-	JYOT01	41	2973	2873	3/23/15	2/27/17	Contig	University of Veterinary Medicine Vienna	SAMN03378822	GCA_000960155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/155/GCA_000960155.1_ASM96015v1	-	15KSM
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.6741	30.4	-	CUQZ01	19	1761	1662	3/31/15	3/18/17	Contig	SC	SAMEA1010633	GCA_001235125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/125/GCA_001235125.1_7092_1_58	-	OXC6505
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121986	1412580	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68579	52.2	chromosome:NZ_CP007387.2/CP007387.2	-	1	4706	4448	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384301	GCA_000625795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/795/GCA_000625795.2_ASM62579v2	24786953	EC20121986
Staphylococcus aureus M0638	1388424	PRJNA216595	216595	Terrabacteria group	Firmicutes	2.88357	32.9	-	JBEB01	53	3060	2888	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325548	GCA_000527875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/875/GCA_000527875.1_Stap_aure_M0638_V1	-	M0638
Staphylococcus aureus M0640	1388425	PRJNA216596	216596	Terrabacteria group	Firmicutes	2.83651	32.8	-	JBEA01	43	2986	2813	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325549	GCA_000527895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/895/GCA_000527895.1_Stap_aure_M0640_V1	-	M0640
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121989	1412579	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007388.2/CP007388.2	-	1	4709	4449	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384300	GCA_000625815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/815/GCA_000625815.2_ASM62581v2	24786953	EC20121989
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.71581	30.3	-	CUJY01	17	1821	1691	3/31/15	3/18/17	Contig	SC	SAMEA1010556	GCA_001235145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/145/GCA_001235145.1_7038_3_68	-	OXC6318
Listeria monocytogenes	1639	PRJNA276075	276075	Terrabacteria group	Firmicutes	2.93071	37.9	-	JYOH01	34	3023	2911	4/17/15	2/27/17	Contig	University of Veterinary Medicine Vienna	SAMN03365948	GCA_000972995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/995/GCA_000972995.1_ASM97299v1	-	1KSM
Mycobacterium tuberculosis TKK_04_0113	1448576	PRJNA235581	235581	Terrabacteria group	Actinobacteria	4.4016	65.6	-	JJUJ01	72	4303	4119	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586071	GCA_000654115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/115/GCA_000654115.1_Myco_tube_TKK_04_0113_V1	-	TKK_04_0113
Escherichia coli H299	656393	PRJNA38991	38991	Proteobacteria	Gammaproteobacteria	5.31784	50.7	-	ADBC01	113	5665	5154	3/16/10	2/22/17	Scaffold	Broad Institute	SAMN02595374	GCA_000176695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/695/GCA_000176695.2_ASM17669v2	-	H299
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08026	39.7	-	CLCI01	72	2310	2088	3/21/15	3/11/17	Contig	SC	SAMEA1025991	GCA_001094125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/125/GCA_001094125.1_6899_4_1	-	SMRU2017
Helicobacter pylori	210	PRJNA245349	245349	Proteobacteria	delta/epsilon subdivisions	1.63224	38.9	-	JMGG01	49	1605	1447	5/12/14	3/24/17	Contig	Penn State University	SAMN02736904	GCA_000689015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/015/GCA_000689015.1_J166output_1moC	24924186	J166output_1moC
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.06146	52.1	-	CFKI01	146	2321	2060	3/15/15	3/18/17	Scaffold	SC	SAMEA1031716	GCA_001349295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/295/GCA_001349295.1_6714_1_21	-	NM1673
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.25038	66.6	-	JUAV01	54	5907	5748	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105384	GCA_000796615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/615/GCA_000796615.1_AZPAE12140	25367914	AZPAE12140
Acinetobacter baumannii 299505	1310643	PRJNA194719	194719	Proteobacteria	Gammaproteobacteria	3.97469	38.8	-	JEWY01	124	3860	3602	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02380521	GCA_000580975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/975/GCA_000580975.1_ASM58097v1	-	299505
Streptococcus agalactiae	1311	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.00566	35.2	-	JVII01	26	2036	1934	7/10/15	3/17/17	Contig	University of Washington	SAMN03197598	GCA_001072815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/815/GCA_001072815.1_ASM107281v1	26230489	408_SAGA
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.40191	41.1	-	FIHD01	110	2430	2233	2/10/16	3/19/17	Contig	SC	SAMEA1316575	GCA_900053125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/125/GCA_900053125.1_7114_5_54	-	LSS54
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.5376	38.3	-	FJMO01	35	3243	3112	2/20/16	3/27/17	Contig	SC	SAMEA2080798	GCA_900065445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/445/GCA_900065445.1_10625_3_77	-	2532STDY5467646
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.46957	50.6	-	CXBI01	416	4764	4263	7/16/15	2/24/17	Scaffold	SC	SAMEA954572	GCA_001253975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/975/GCA_001253975.1_5236_1_12	-	ShIB1980_440738
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.22335	68.1	-	LXCJ01	146	7490	6921	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208761	GCA_001980205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/205/GCA_001980205.1_ASM198020v1	-	MSHR3876
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.0372	47.5	-	MWHI01	98	3852	3693	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263859	GCA_002098705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/705/GCA_002098705.1_ASM209870v1	28219321	CISM_1020234.0
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.20745	28.8	-	CZZC01	782	3791	3643	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664064	GCA_900008375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/375/GCA_900008375.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.12659	45.2	-	LKQS01	104	4859	4641	4/28/16	3/20/17	Contig	FDA/CFSAN	SAMN04145933	GCA_001633955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/955/GCA_001633955.1_ASM163395v1	27315090	CFSAN029654
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.62212	57.1	-	LEYK01	7	5664	5422	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280335	GCA_001032685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/685/GCA_001032685.1_Kleb_pneu_CHS194_V1	-	CHS194
Enterococcus faecalis	1351	PRJNA400682	400682	Terrabacteria group	Firmicutes	3.05545	37.6	-	NSJR01	163	3116	2955	9/11/17	9/13/17	Contig	University of Leicester	SAMN07572763	GCA_002288985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/985/GCA_002288985.1_ASM228898v1	-	44.1
Enterococcus faecium	1352	PRJNA393251	393251	Terrabacteria group	Firmicutes	3.00775	38	-	NMZJ01	2	3053	2793	8/22/17	8/24/17	Contig	University of Tromso	SAMN07326773	GCA_002263125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/125/GCA_002263125.1_ASM226312v1	-	BM4105-RF
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.77948	67.8	-	CSMD01	686	3790	3186	3/23/15	3/26/17	Scaffold	SC	SAMEA751494	GCA_001209065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/065/GCA_001209065.1_5476_8_11	-	B286
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.7526	31.2	-	FBFN01	18	1834	1745	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683205	GCA_001493095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/095/GCA_001493095.1_EC5693	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.93485	55	-	FKEH01	58	4876	4635	4/6/16	3/28/17	Scaffold	SC	SAMEA2273176	GCA_900077225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/225/GCA_900077225.1_12045_4_51	-	e482
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.0902	64.3	-	FVTR01	13	5135	4994	3/10/17	3/18/17	Contig	SC	SAMEA2156007	GCA_900139145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/145/GCA_900139145.1_10465_1_60	-	659
Pseudomonas sp. NFACC10-1	1566247	PRJEB17771	353194	Proteobacteria	Gammaproteobacteria	5.82717	59.4	-	FPJB01	21	5192	4957	11/12/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159505	GCA_900119195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/195/GCA_900119195.1_IMG-taxon_2599185155_annotated_assembly	-	NFACC10-1
Streptomyces sp. NRRL F-6133	1463875	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.85709	70.9	-	JOHM01	295	-	-	7/1/14	7/3/14	Scaffold	University of Illinois	SAMN02645481	GCA_000722325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/325/GCA_000722325.1_ASM72232v1	-	NRRL F-6133
Streptomyces sp. NRRL F-5140	1463859	PRJNA238534	238534	Terrabacteria group	Actinobacteria	10.4334	70.4	-	JOIA01	2770	-	-	7/1/14	5/13/16	Scaffold	University of Illinois	SAMN02645495	GCA_000722355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/355/GCA_000722355.1_ASM72235v1	-	NRRL F-5140
Pseudomonas sp. NFACC16-2	1554560	PRJEB17772	353195	Proteobacteria	Gammaproteobacteria	6.63736	60.6	-	FPIX01	94	6008	5737	11/12/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660640	GCA_900119205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/205/GCA_900119205.1_IMG-taxon_2599185306_annotated_assembly	-	NFACC16-2
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.77987	64.2	-	FVTS01	11	4718	4605	3/10/17	3/18/17	Contig	SC	SAMEA2152739	GCA_900139155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/155/GCA_900139155.1_10465_1_64	-	674
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.1217	54.6	-	FKEL01	85	5061	4803	4/6/16	3/28/17	Scaffold	SC	SAMEA2273178	GCA_900077235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/235/GCA_900077235.1_12045_4_53	-	e484
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.85814	30.9	-	FBQH01	84	1951	1839	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683483	GCA_001493115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/115/GCA_001493115.1_H130500174	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.76418	67.6	-	CSPQ01	551	3739	3116	3/23/15	3/26/17	Scaffold	SC	SAMEA1931345	GCA_001209245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/245/GCA_001209245.1_5463_5_9	-	B342
Enterococcus faecium	1352	PRJNA393251	393251	Terrabacteria group	Firmicutes	2.97419	37.9	-	NMZL01	3	3074	2851	8/22/17	8/24/17	Contig	University of Tromso	SAMN07326771	GCA_002263175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/175/GCA_002263175.1_ASM226317v1	-	UW1551
Enterococcus faecalis	1351	PRJNA400682	400682	Terrabacteria group	Firmicutes	3.00542	37.5	-	NSJS01	75	3084	2905	9/11/17	9/13/17	Contig	University of Leicester	SAMN07572762	GCA_002289025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/025/GCA_002289025.1_ASM228902v1	-	13.1
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.85647	57	-	LEYL01	14	5959	5677	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280336	GCA_001032695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/695/GCA_001032695.1_Kleb_pneu_CHS195_V1	-	CHS195
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.12632	45.2	-	LKQH01	40	4837	4643	4/28/16	3/20/17	Contig	FDA/CFSAN	SAMN04145922	GCA_001633985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/985/GCA_001633985.1_ASM163398v1	27315090	CFSAN025059
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.27861	29.5	-	CZZL01	1816	3925	3669	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664067	GCA_900008385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/385/GCA_900008385.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.02609	47.5	-	MWHJ01	126	3782	3672	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263858	GCA_002098715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/715/GCA_002098715.1_ASM209871v1	28219321	CISM_1020231.9
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.14988	68.2	-	LXCL01	132	7418	6814	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208763	GCA_001980215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/215/GCA_001980215.1_ASM198021v1	-	MSHR3998
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.83915	50.6	-	CXIP01	481	5381	4685	7/16/15	2/24/17	Scaffold	SC	SAMEA2003384	GCA_001253995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/995/GCA_001253995.1_8289_7_75	-	85715
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.35123	38.3	-	FJGU01	25	3052	2941	2/20/16	3/27/17	Contig	SC	SAMEA2077492	GCA_900065895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/895/GCA_900065895.1_10625_2_24	-	2532STDY5467497
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.14802	41.4	-	FIHB01	28	2076	1969	2/10/16	3/19/17	Contig	SC	SAMEA1316560	GCA_900053135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/135/GCA_900053135.1_7114_5_55	-	LSS55
Streptococcus agalactiae	1311	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.03619	35.1	-	JUUT01	80	2089	1998	7/10/15	3/17/17	Contig	University of Washington	SAMN03197951	GCA_001074175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/175/GCA_001074175.1_ASM107417v1	26230489	745_SAGA
Acinetobacter baumannii 466760	1310611	PRJNA194687	194687	Proteobacteria	Gammaproteobacteria	3.88361	39.1	-	JEXB01	39	3756	3532	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02380524	GCA_000580995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/995/GCA_000580995.1_ASM58099v1	-	466760
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.78166	66.1	-	JTWK01	126	6571	6347	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105499	GCA_000796645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/645/GCA_000796645.1_AZPAE14722	25367914	AZPAE14722
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.06244	52	-	CIJZ01	115	2342	2016	4/21/15	3/21/17	Scaffold	SC	SAMEA1031717	GCA_001349315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/315/GCA_001349315.1_6731_8_1	-	NM2934
Helicobacter pylori	210	PRJNA245346	245346	Proteobacteria	delta/epsilon subdivisions	1.63254	38.9	-	JMGE01	43	1607	1450	5/12/14	3/24/17	Contig	Penn State University	SAMN02736902	GCA_000689035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/035/GCA_000689035.1_J166output_1moA	24924186	J166output_1moA
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05677	39.6	-	CNWL02	156	2204	1981	3/23/15	3/11/17	Contig	SC	SAMEA1032555	GCA_001094225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/225/GCA_001094225.2_7001_2_15	-	R34-3120
Escherichia coli O157:H7 str. EC4206	444447	PRJNA27735	27735	Proteobacteria	Gammaproteobacteria	5.62993	50.5	-	ABHK02	7	6055	5460	11/8/07	3/5/17	Scaffold	J. Craig Venter Institute	SAMN02436318	GCA_000181735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/181/735/GCA_000181735.1_ASM18173v1	-	EC4206
Mycobacterium tuberculosis TKK_04_0114	1448577	PRJNA235582	235582	Terrabacteria group	Actinobacteria	4.38457	65.6	-	JJUI01	80	4315	4108	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586072	GCA_000654135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/135/GCA_000654135.1_Myco_tube_TKK_04_0114_V1	-	TKK_04_0114
Listeria monocytogenes	1639	PRJNA276086	276086	Terrabacteria group	Firmicutes	2.911	37.9	-	JYOI01	26	2972	2884	4/17/15	2/27/17	Contig	University of Veterinary Medicine Vienna	SAMN03366358	GCA_000973005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/005/GCA_000973005.1_ASM97300v1	-	2KSM
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70929	30.2	-	CUOC01	21	1777	1630	3/31/15	3/18/17	Contig	SC	SAMEA1010419	GCA_001235165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/165/GCA_001235165.1_7065_7_75	-	OXC6423
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120051	1412601	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007433.2/CP007433.2	-	1	4708	4446	4/1/14	3/2/17	Chromosome	LFZ	SAMN02384322	GCA_000625835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/835/GCA_000625835.2_ASM62583v2	24786953	EC20120051
Staphylococcus aureus M0643	1388427	PRJNA216598	216598	Terrabacteria group	Firmicutes	2.86654	32.9	-	JBDY01	40	3028	2860	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325551	GCA_000527915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/915/GCA_000527915.1_Stap_aure_M0643_V1	-	M0643
Staphylococcus aureus M0645	1388429	PRJNA216600	216600	Terrabacteria group	Firmicutes	2.90401	32.8	-	JBDW01	74	3093	2944	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325553	GCA_000527935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/935/GCA_000527935.1_Stap_aure_M0645_V1	-	M0645
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121990	1412578	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007411.2/CP007411.2	-	1	4706	4448	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384299	GCA_000625875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/875/GCA_000625875.2_ASM62587v2	24786953	EC20121990
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70117	30.4	-	CUPH01	24	1804	1698	3/31/15	3/18/17	Contig	SC	SAMEA1010652	GCA_001235245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/245/GCA_001235245.1_7092_1_18	-	OXC6465
Listeria monocytogenes	1639	PRJDB1730	274453	Terrabacteria group	Firmicutes	2.90814	37.9	-	BAZD01	35	2964	2781	2/3/15	2/27/17	Contig	Tokyo university of marine science and technology	SAMD00000510	GCA_000974345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/345/GCA_000974345.1_ASM97434v1	25492229	NIHS-28
Mycobacterium tuberculosis TKK_04_0117	1448579	PRJNA235584	235584	Terrabacteria group	Actinobacteria	4.39905	65.6	-	JJUH01	1	4278	4113	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586074	GCA_000654155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/155/GCA_000654155.1_Myco_tube_TKK_04_0117_V1	-	TKK_04_0117
Escherichia coli O157:H7 str. EC4045	444448	PRJNA27733	27733	Proteobacteria	Gammaproteobacteria	5.63485	50.5	-	ABHL02	8	6053	5606	11/8/07	2/22/17	Scaffold	J. Craig Venter Institute	SAMN02436319	GCA_000181755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/181/755/GCA_000181755.1_ASM18175v1	-	EC4045
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.19678	39.5	-	CMRD01	56	2459	2199	3/23/15	3/4/17	Contig	SC	SAMEA2062162	GCA_001094265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/265/GCA_001094265.1_9803_8_30	-	6B
Helicobacter pylori	210	PRJNA245348	245348	Proteobacteria	delta/epsilon subdivisions	1.63205	38.9	-	JMGF01	46	1605	1451	5/12/14	3/24/17	Contig	Penn State University	SAMN02736903	GCA_000689055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/055/GCA_000689055.1_J166output_1moB	24924186	J166output_1moB
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.07552	52.1	-	CFME01	153	2334	2079	3/15/15	3/18/17	Scaffold	SC	SAMEA1031718	GCA_001349335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/335/GCA_001349335.1_6714_1_1	-	NM1264
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.32381	66.5	-	JUAU01	99	6038	5813	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105385	GCA_000796655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/655/GCA_000796655.1_AZPAE12142	25367914	AZPAE12142
Acinetobacter baumannii 647609	1310610	PRJNA194686	194686	Proteobacteria	Gammaproteobacteria	4.0295	39.1	-	JEXE01	166	4017	3729	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02380527	GCA_000581015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/015/GCA_000581015.1_ASM58101v1	-	647609
Streptococcus agalactiae	1311	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.08093	35.4	-	JUUN01	103	2150	2042	7/10/15	3/17/17	Contig	University of Washington	SAMN03197957	GCA_001074215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/215/GCA_001074215.1_ASM107421v1	26230489	750_SAGA
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	1.95198	41.3	-	FILE01	27	1940	1848	2/10/16	3/19/17	Contig	SC	SAMEA1316576	GCA_900053145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/145/GCA_900053145.1_7054_7_61	-	SS1073
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.43858	38.3	-	FJLV01	33	3136	3008	2/20/16	3/27/17	Contig	SC	SAMEA2077985	GCA_900065905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/905/GCA_900065905.1_10625_3_63	-	2532STDY5467632
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.56752	50.6	-	CWTF01	415	5194	4255	7/16/15	2/24/17	Scaffold	SC	SAMEA3345024	GCA_001254015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/015/GCA_001254015.1_H14088028501	-	28501ss_1
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.2878	68	-	LXCM01	132	7494	6878	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208764	GCA_001980245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/245/GCA_001980245.1_ASM198024v1	-	MSHR4250
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.03498	47.5	-	MWHK01	90	3859	3690	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263857	GCA_002098755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/755/GCA_002098755.1_ASM209875v1	28219321	CISM_1020229.6
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.11955	28.5	-	CZZZ01	299	3751	3647	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664084	GCA_900008395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/395/GCA_900008395.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.13012	45.2	-	LKQM01	40	4857	4648	4/28/16	3/20/17	Contig	FDA/CFSAN	SAMN04145927	GCA_001633995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/633/995/GCA_001633995.1_ASM163399v1	27315090	CFSAN025064
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.85829	57	-	LEYM01	11	5932	5654	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280338	GCA_001032705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/705/GCA_001032705.1_Kleb_pneu_CHS197_V1	-	CHS197
Enterococcus faecalis	1351	PRJNA400682	400682	Terrabacteria group	Firmicutes	3.1117	37.4	-	NSJT01	119	3253	3057	9/11/17	9/13/17	Contig	University of Leicester	SAMN07572761	GCA_002289045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/045/GCA_002289045.1_ASM228904v1	-	H25
Enterococcus faecium	1352	PRJNA393251	393251	Terrabacteria group	Firmicutes	3.15443	37.7	-	NMZI01	6	3246	2914	8/22/17	8/24/17	Contig	University of Tromso	SAMN07326774	GCA_002263195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/195/GCA_002263195.1_ASM226319v1	-	9-F-6
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.70515	67.6	-	CSMQ01	1008	3781	2991	3/23/15	3/26/17	Scaffold	SC	SAMEA751452	GCA_001209845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/845/GCA_001209845.1_5515_6_4	-	B125
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65763	31.4	-	FBIU01	24	1713	1632	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683289	GCA_001493135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/135/GCA_001493135.1_CCN56	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.19559	54.6	-	FKEO01	98	5156	4889	4/6/16	3/28/17	Scaffold	SC	SAMEA2273179	GCA_900077245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/245/GCA_900077245.1_12045_4_54	-	e487
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.92019	64.2	-	FSMM01	31	4907	4783	12/14/16	3/21/17	Contig	SC	SAMEA2148192	GCA_900139165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/165/GCA_900139165.1_10465_1_63	-	669
Pseudomonas sp. NFACC09-4	1566237	PRJEB17770	353193	Proteobacteria	Gammaproteobacteria	6.01446	62	-	FPIV01	55	5309	5158	11/12/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159376	GCA_900119215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/215/GCA_900119215.1_IMG-taxon_2599185310_annotated_assembly	-	NFACC09-4
Streptomyces sp. NRRL F-4835	1463852	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.38556	71	-	JOIE01	174	-	-	7/1/14	5/13/16	Scaffold	University of Illinois	SAMN02645499	GCA_000722365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/365/GCA_000722365.1_ASM72236v1	-	NRRL F-4835
Streptomyces sp. NRRL WC-3704	1463931	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.51453	68.1	-	JOCI01	351	-	-	7/1/14	7/3/14	Scaffold	University of Illinois	SAMN02645415	GCA_000722415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/415/GCA_000722415.1_ASM72241v1	-	NRRL WC-3704
Pseudomonas sp. NFACC04-2	1566242	PRJEB17769	353207	Proteobacteria	Gammaproteobacteria	6.35499	61.3	-	FPJC01	63	5654	5455	11/12/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159439	GCA_900119265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/265/GCA_900119265.1_IMG-taxon_2599185311_annotated_assembly	-	NFACC04-2
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.17398	64	-	FSML01	21	5200	5099	12/14/16	3/21/17	Contig	SC	SAMEA2142402	GCA_900139185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/185/GCA_900139185.1_10465_1_61	-	662
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.05334	55	-	FKEU01	33	4898	4676	4/6/16	3/28/17	Scaffold	SC	SAMEA2273182	GCA_900077255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/255/GCA_900077255.1_12082_4_41	-	e521
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.6889	31.3	-	FBLQ01	30	1752	1656	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683368	GCA_001493155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/155/GCA_001493155.1_SWAN392	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.70472	67.5	-	CSSY01	830	3749	2947	3/23/15	3/26/17	Scaffold	SC	SAMEA1931721	GCA_001209985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/985/GCA_001209985.1_5463_7_3	-	B151
Enterococcus faecium	1352	PRJNA393251	393251	Terrabacteria group	Firmicutes	3.00043	38.1	-	NMZK01	2	3044	2776	8/22/17	8/24/17	Contig	University of Tromso	SAMN07326772	GCA_002263205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/205/GCA_002263205.1_ASM226320v1	-	BM4105-RF
Enterococcus faecalis	1351	PRJNA400682	400682	Terrabacteria group	Firmicutes	2.73262	37.6	-	NSJU01	48	2723	2599	9/11/17	9/13/17	Contig	University of Leicester	SAMN07572760	GCA_002289055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/055/GCA_002289055.1_ASM228905v1	-	EFC 16/09
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.88499	56.9	-	LEYO01	9	5957	5678	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280341	GCA_001032765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/765/GCA_001032765.1_Kleb_pneu_CHS200_V1	-	CHS200
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.12703	45.2	-	LKQT01	80	4845	4641	4/28/16	3/20/17	Contig	FDA/CFSAN	SAMN04145934	GCA_001634035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/035/GCA_001634035.1_ASM163403v1	27315090	CFSAN029656
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.25301	29	-	FAAP01	1363	3829	3629	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664099	GCA_900008425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/425/GCA_900008425.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.03488	47.5	-	MWHL01	108	3824	3687	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263856	GCA_002098765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/765/GCA_002098765.1_ASM209876v1	28219321	CISM_101
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.16931	68.1	-	LXCK01	198	7483	6852	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208762	GCA_001980265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/265/GCA_001980265.1_ASM198026v1	-	MSHR3974
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.41478	50.9	-	CXBX01	462	4576	3694	7/17/15	3/5/17	Scaffold	SC	SAMEA954658	GCA_001254035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/035/GCA_001254035.1_5236_2_11	-	ShIB2012_440763
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.48585	38.3	-	FJLZ01	34	3190	3059	2/20/16	3/27/17	Contig	SC	SAMEA2080797	GCA_900065915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/915/GCA_900065915.1_10625_3_74	-	2532STDY5467643
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.15053	41.1	-	FIMA01	56	2201	2061	2/10/16	3/19/17	Contig	SC	SAMEA1316574	GCA_900053155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/155/GCA_900053155.1_7054_7_76	-	SS996
Streptococcus agalactiae	1311	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.10328	35.3	-	JUKX01	56	2131	2054	7/10/15	3/17/17	Contig	University of Washington	SAMN03198207	GCA_001076065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/065/GCA_001076065.1_ASM107606v1	26230489	986_SAGA
Acinetobacter baumannii 984213	1310604	PRJNA194680	194680	Proteobacteria	Gammaproteobacteria	4.17704	39.2	-	JEVX01	449	4143	3823	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02380462	GCA_000581055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/055/GCA_000581055.1_ASM58105v1	-	984213
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.44611	66.4	-	JUAS01	150	6138	5803	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105387	GCA_000796705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/705/GCA_000796705.1_AZPAE12144	25367914	AZPAE12144
Neisseria meningitidis	487	PRJEB2603	204351	Proteobacteria	Betaproteobacteria	2.05757	52.1	-	CFMD01	146	2318	2062	3/15/15	3/21/17	Scaffold	SC	SAMEA1031724	GCA_001349355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/355/GCA_001349355.1_6714_1_11	-	NM1482
Helicobacter pylori	210	PRJNA245350	245350	Proteobacteria	delta/epsilon subdivisions	1.63064	38.9	-	JMGH01	41	1600	1452	5/12/14	3/24/17	Contig	Penn State University	SAMN02736905	GCA_000689075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/075/GCA_000689075.1_J166output_2moA	24924186	J166output_2moA
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.06989	39.7	-	CLTZ01	76	2288	2077	3/21/15	3/4/17	Contig	SC	SAMEA1028703	GCA_001094305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/305/GCA_001094305.1_6972_5_6	-	SMRU2622
Escherichia coli O157:H7 str. EC4042	444449	PRJNA27737	27737	Proteobacteria	Gammaproteobacteria	5.61773	50.5	-	ABHM02	4	6024	5481	11/8/07	2/22/17	Scaffold	J. Craig Venter Institute	SAMN02436173	GCA_000181775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/181/775/GCA_000181775.1_ASM18177v1	-	EC4042
Mycobacterium tuberculosis TKK_04_0120	1448582	PRJNA235587	235587	Terrabacteria group	Actinobacteria	4.40603	65.6	-	JJUF01	59	4294	4086	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586077	GCA_000654175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/175/GCA_000654175.1_Myco_tube_TKK_04_0120_V1	-	TKK_04_0120
Listeria monocytogenes	1639	PRJNA274900	274900	Terrabacteria group	Firmicutes	2.91954	37.8	-	LABG01	9	2961	2870	5/1/15	2/27/17	Contig	Teagasc Food Research Centre	SAMN03333333	GCA_000987705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/987/705/GCA_000987705.1_ASM98770v1	26067969	DPC6895
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.63116	30.4	-	CUSM01	14	1728	1617	3/31/15	3/18/17	Contig	SC	SAMEA1010555	GCA_001235365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/365/GCA_001235365.1_7092_1_93	-	OXC6540
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20122022	1412577	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007412.2/CP007412.2	-	1	4707	4448	4/1/14	3/2/17	Chromosome	LFZ	SAMN02384298	GCA_000625895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/895/GCA_000625895.2_ASM62589v2	24786953	EC20122022
Staphylococcus aureus M0647	1388430	PRJNA216601	216601	Terrabacteria group	Firmicutes	2.8974	32.9	-	JBDV01	19	3044	2881	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325554	GCA_000527955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/955/GCA_000527955.1_Stap_aure_M0647_V1	-	M0647
Staphylococcus aureus M0649	1388431	PRJNA216602	216602	Terrabacteria group	Firmicutes	2.84123	32.8	-	JBDU01	43	2975	2811	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325555	GCA_000527975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/975/GCA_000527975.1_Stap_aure_M0649_V1	-	M0649
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20122026	1412576	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68579	52.2	chromosome:NZ_CP007413.2/CP007413.2	-	1	4706	4448	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384297	GCA_000625915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/915/GCA_000625915.2_ASM62591v2	24786953	EC20122026
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.5937	30.4	-	CURE01	11	1653	1556	3/31/15	3/18/17	Contig	SC	SAMEA1010469	GCA_001235565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/565/GCA_001235565.1_7092_1_63	-	OXC6510
Listeria monocytogenes	1639	PRJNA283553	283553	Terrabacteria group	Firmicutes	3.07702	37.7	-	LDIQ01	62	3162	2897	5/22/15	4/21/17	Contig	California Department of Public Health	SAMN03652557	GCA_001012875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/875/GCA_001012875.1_ASM101287v1	-	FDLB_F15M01058_4a2
Mycobacterium tuberculosis TKK_04_0122	1448584	PRJNA235589	235589	Terrabacteria group	Actinobacteria	4.40735	65.6	-	JJUE01	1	4277	4112	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586079	GCA_000654195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/195/GCA_000654195.1_Myco_tube_TKK_04_0122_V1	-	TKK_04_0122
Escherichia coli E1167	656372	PRJNA38941	38941	Proteobacteria	Gammaproteobacteria	4.94277	50.7	-	AEHS01	32	5166	4819	2/25/11	2/22/17	Scaffold	Broad Institute	SAMN02595400	GCA_000190795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/795/GCA_000190795.1_ASM19079v1	-	E1167
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0445	39.6	-	CNQD02	128	2238	2023	3/23/15	3/5/17	Contig	SC	SAMEA1032688	GCA_001094385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/385/GCA_001094385.2_6952_7_13	-	R34-3173
Helicobacter pylori	210	PRJNA245340	245340	Proteobacteria	delta/epsilon subdivisions	1.63409	38.9	-	JMGC01	47	1606	1451	5/12/14	3/24/17	Contig	Penn State University	SAMN02736895	GCA_000689095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/095/GCA_000689095.1_J166output_1wkB	24924186	J166output_1wkB
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16638	51.6	-	FEVG01	89	2522	2172	2/9/16	3/19/17	Scaffold	SC	SAMEA2674053	GCA_900017035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/035/GCA_900017035.1_14324_4_1	-	2842STDY5881246
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.11934	65.8	-	JTWR01	129	6819	6550	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105492	GCA_000796725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/725/GCA_000796725.1_AZPAE14715	25367914	AZPAE14715
Acinetobacter baumannii 1267820	1310628	PRJNA194704	194704	Proteobacteria	Gammaproteobacteria	3.7761	39.2	-	JEWD01	246	3620	3357	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02380500	GCA_000581075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/075/GCA_000581075.1_ASM58107v1	-	1267820
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.03786	35.3	-	CQCR01	20	2103	1977	3/23/15	3/17/17	Contig	SC	SAMEA1031486	GCA_001086185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/185/GCA_001086185.1_6753_5_13	-	RBH02
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	1.96227	41.3	-	FIMC01	26	1969	1870	2/10/16	3/19/17	Contig	SC	SAMEA1316596	GCA_900053175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/175/GCA_900053175.1_7054_7_13	-	SS998
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.29908	38.1	-	FJNH01	47	3030	2869	2/27/16	3/27/17	Contig	SC	SAMEA2065092	GCA_900070125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/070/125/GCA_900070125.1_10208_4_29	-	2531STDY5467406
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.90829	50.5	-	CWZT01	457	5505	4738	7/16/15	2/24/17	Scaffold	SC	SAMEA2445748	GCA_001254075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/075/GCA_001254075.1_12971_8_57	-	H140880294
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.21751	68.1	-	LXCN01	182	7459	6850	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208765	GCA_001980275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/275/GCA_001980275.1_ASM198027v1	-	MSHR4301
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.03186	47.5	-	MWHM01	121	3797	3677	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263855	GCA_002098795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/795/GCA_002098795.1_ASM209879v1	28219321	CISM_1019829.2
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.30984	29.4	-	FAAR01	907	4073	3830	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664102	GCA_900008435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/435/GCA_900008435.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.17912	45.2	-	LKQC01	34	4917	4709	4/28/16	3/20/17	Contig	FDA/CFSAN	SAMN04145917	GCA_001634105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/105/GCA_001634105.1_ASM163410v1	27315090	CFSAN025054
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.68549	56.9	-	LEYP01	8	5749	5482	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280342	GCA_001032775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/775/GCA_001032775.1_Kleb_pneu_CHS201_V1	-	CHS201
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.79237	67.9	-	CSPR01	401	3679	3244	3/23/15	3/26/17	Scaffold	SC	SAMEA751176	GCA_001210045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/045/GCA_001210045.1_5601_5_7	-	B312
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66005	31.4	-	FBDP01	19	1723	1626	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683156	GCA_001493175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/175/GCA_001493175.1_EC3721	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.90375	55	-	FKEP01	42	4822	4592	4/6/16	3/28/17	Scaffold	SC	SAMEA2273181	GCA_900077265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/265/GCA_900077265.1_12045_4_55	-	e513
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.19228	64.1	-	FSMN01	18	5216	5105	12/14/16	3/21/17	Contig	SC	SAMEA2162897	GCA_900139195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/195/GCA_900139195.1_10465_1_62	-	665
Pseudomonas sp. NFPP02	1566216	PRJEB17893	353799	Proteobacteria	Gammaproteobacteria	5.86282	60.3	-	FPJI01	31	5380	5204	11/17/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159398	GCA_900119355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/355/GCA_900119355.1_IMG-taxon_2599185189_annotated_assembly	-	NFPP02
Streptomyces sp. PP-C42	986330	PRJNA63125	63125	Terrabacteria group	Actinobacteria	6.46785	72	-	AEWS01	7074	-	-	3/7/11	1/8/14	Contig	"University of Kiel, Germany and Zhejiang Universtiy, China."	SAMN02472180	GCA_000191645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/645/GCA_000191645.2_ASM19164v2	21571991	PP-C42
Streptomyces sp. Wigar10	1085628	PRJNA73091	73091	Terrabacteria group	Actinobacteria	8.17892	71.9	-	AGDF01	721	-	-	9/30/11	1/8/14	Contig	DOE Great Lakes Bioenergy Research Center	SAMN02472022	GCA_000226995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/995/GCA_000226995.2_ASM22699v2	22123757	Wigar10
Pseudomonas sp. NFR02	1566229	PRJEB17889	353805	Proteobacteria	Gammaproteobacteria	5.78475	60.3	-	FPJJ01	19	5301	5142	11/17/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159316	GCA_900119375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/375/GCA_900119375.1_IMG-taxon_2600255296_annotated_assembly	-	NFR02
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.76216	64.2	-	FSMO01	18	4700	4584	12/14/16	3/21/17	Contig	SC	SAMEA2143576	GCA_900139205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/205/GCA_900139205.1_10465_1_65	-	675
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.78976	55.5	-	FKEN01	35	4704	4485	4/6/16	3/28/17	Scaffold	SC	SAMEA2273183	GCA_900077275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/275/GCA_900077275.1_12082_4_42	-	e532
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75047	31.2	-	FBDB01	25	1840	1742	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683139	GCA_001493215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/215/GCA_001493215.1_EC4690	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.77293	67.7	-	CSSM01	835	3784	3105	3/22/15	3/26/17	Scaffold	SC	SAMEA751174	GCA_001210145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/145/GCA_001210145.1_5601_2_9	-	B081
Enterococcus faecalis	1351	PRJEB14498	336287	Terrabacteria group	Firmicutes	2.76307	37.7	-	FLUT01	92	2838	2699	8/3/16	3/28/17	Contig	JLU	SAMEA4051744	GCA_900092145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/145/GCA_900092145.1_Ef_S1_05	-	-
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.84543	56.9	-	LEYQ01	6	5926	5654	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280343	GCA_001032795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/795/GCA_001032795.1_Kleb_pneu_CHS202_V1	-	CHS202
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.1294	45.2	-	LKQB01	42	4835	4644	4/28/16	3/20/17	Contig	FDA/CFSAN	SAMN04145915	GCA_001634135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/135/GCA_001634135.1_ASM163413v1	27315090	CFSAN025052
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.14908	28.7	-	FABC01	808	3785	3616	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664118	GCA_900008445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/445/GCA_900008445.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.0362	47.5	-	MWHN01	93	3849	3690	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263854	GCA_002098805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/805/GCA_002098805.1_ASM209880v1	28219321	CISM_1019828.5
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.22851	68.1	-	LXCO01	123	7484	6887	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208766	GCA_001980305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/305/GCA_001980305.1_ASM198030v1	-	MSHR4483
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.51452	50.6	-	CXBW01	410	4811	4246	7/16/15	2/24/17	Scaffold	SC	SAMEA954628	GCA_001254115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/115/GCA_001254115.1_5236_3_10	-	ShIB3488_440834
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.38543	38.3	-	FJNI01	26	3074	2953	2/27/16	3/27/17	Contig	SC	SAMEA2060121	GCA_900070135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/070/135/GCA_900070135.1_10060_4_75	-	2531STDY5467356
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05852	41.1	-	FINW01	23	2076	1966	2/10/16	3/19/17	Contig	SC	SAMEA1566183	GCA_900053185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/185/GCA_900053185.1_8337_6_45	-	BM466
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.025	35.2	-	CQCY01	27	2083	1959	3/23/15	3/17/17	Contig	SC	SAMEA1031528	GCA_001104505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/505/GCA_001104505.1_6753_5_23	-	B96P
Acinetobacter baumannii 1429530	1310636	PRJNA194712	194712	Proteobacteria	Gammaproteobacteria	3.98536	39	-	JEWM01	31	3822	3609	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02380509	GCA_000581135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/135/GCA_000581135.1_ASM58113v1	-	1429530
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.45292	66.4	-	JUAR01	62	6106	5846	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105388	GCA_000796745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/745/GCA_000796745.1_AZPAE12145	25367914	AZPAE12145
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.20166	51.6	-	FEVT01	103	2565	2154	2/9/16	3/21/17	Scaffold	SC	SAMEA2674089	GCA_900017045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/045/GCA_900017045.1_14324_4_37	-	2842STDY5881282
Helicobacter pylori	210	PRJNA245337	245337	Proteobacteria	delta/epsilon subdivisions	1.63401	38.9	-	JMGN01	49	1605	1448	5/12/14	3/24/17	Contig	Penn State University	SAMN02736891	GCA_000689115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/115/GCA_000689115.1_J166output_1wkA	24924186	J166output_1wkA
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.06595	39.7	-	CMOC01	43	2297	2074	3/23/15	3/4/17	Contig	SC	SAMEA2061495	GCA_001094445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/445/GCA_001094445.1_9803_7_27	-	32F
Escherichia coli E1520	656374	PRJNA38945	38945	Proteobacteria	Gammaproteobacteria	4.93214	50.6	-	AEHT01	35	5170	4637	2/23/11	2/22/17	Scaffold	Broad Institute	SAMN02595401	GCA_000190815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/815/GCA_000190815.1_ASM19081v1	-	E1520
Mycobacterium tuberculosis TKK_04_0123	1448585	PRJNA235590	235590	Terrabacteria group	Actinobacteria	4.39971	65.6	-	JJUD01	1	4277	4112	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586080	GCA_000654215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/215/GCA_000654215.1_Myco_tube_TKK_04_0123_V1	-	TKK_04_0123
Listeria monocytogenes	1639	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.90665	38	-	JWSM01	1	2946	2821	12/24/14	7/6/17	Contig	US Food and Drug Administration 	SAMN03255438	GCA_001188025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/025/GCA_001188025.1_ASM118802v1	-	CFSAN006122
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64211	30.5	-	CUTX01	16	1712	1615	3/31/15	3/18/17	Contig	SC	SAMEA1401309	GCA_001235585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/585/GCA_001235585.1_7213_3_4	-	OXC6547
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20122031	1412575	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68588	52.2	chromosome:NZ_CP007414.2/CP007414.2	-	1	4705	4446	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384296	GCA_000625935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/935/GCA_000625935.2_ASM62593v2	24786953	EC20122031
Staphylococcus aureus M0652	1388433	PRJNA216604	216604	Terrabacteria group	Firmicutes	2.89918	32.9	-	JBDS01	66	3057	2887	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325557	GCA_000527995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/995/GCA_000527995.1_Stap_aure_M0652_V1	-	M0652
Staphylococcus aureus M0653	1388434	PRJNA216605	216605	Terrabacteria group	Firmicutes	2.89788	32.8	-	JBDR01	60	3060	2897	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325558	GCA_000528015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/015/GCA_000528015.1_Stap_aure_M0653_V1	-	M0653
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20122033	1412574	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007415.2/CP007415.2	-	1	4706	4448	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384295	GCA_000625955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/955/GCA_000625955.2_ASM62595v2	24786953	EC20122033
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.57072	30.4	-	CUQA01	10	1650	1540	3/31/15	3/18/17	Contig	SC	SAMEA1010393	GCA_001235625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/625/GCA_001235625.1_7092_1_33	-	OXC6480
Listeria monocytogenes	1639	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.93537	38	-	JWSN01	2	2966	2819	12/24/14	7/6/17	Contig	US Food and Drug Administration 	SAMN03255437	GCA_001188045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/045/GCA_001188045.1_ASM118804v1	-	NRRL B-57603
Mycobacterium tuberculosis M984	1448610	PRJNA235620	235620	Terrabacteria group	Actinobacteria	4.43188	65.6	-	JKQE01	6	4288	4107	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598956	GCA_000654235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/235/GCA_000654235.1_Myco_tube_M984_V1	-	M984
Escherichia coli E482	550687	PRJNA38949	38949	Proteobacteria	Gammaproteobacteria	4.85752	50.7	-	AEHU01	34	5038	4583	2/23/11	2/22/17	Scaffold	Broad Institute	SAMN02595402	GCA_000190835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/835/GCA_000190835.1_ASM19083v1	-	E482
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07119	39.7	-	CNYL02	337	2212	2035	3/23/15	3/11/17	Contig	SC	SAMEA1463186	GCA_001094505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/505/GCA_001094505.2_7553_4_39	-	NP7047
Helicobacter pylori	210	PRJNA245352	245352	Proteobacteria	delta/epsilon subdivisions	1.63481	38.9	-	JMGJ01	46	1603	1449	5/12/14	3/24/17	Contig	Penn State University	SAMN02736907	GCA_000689135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/135/GCA_000689135.1_J166output_2moC	24924186	J166output_2moC
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.1579	51.5	-	FEVU01	83	2508	2131	2/9/16	3/21/17	Scaffold	SC	SAMEA2674092	GCA_900017055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/055/GCA_900017055.1_14324_4_40	-	2842STDY5881285
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.3135	66.5	-	JUAQ01	70	5986	5806	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105389	GCA_000796765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/765/GCA_000796765.1_AZPAE12146	25367914	AZPAE12146
Acinetobacter baumannii 1461963	1310645	PRJNA194721	194721	Proteobacteria	Gammaproteobacteria	4.10192	38.8	-	JEWQ01	140	3987	3754	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02380513	GCA_000581155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/155/GCA_000581155.1_ASM58115v1	-	1461963
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.08326	35.4	-	CPWB01	14	2160	2049	3/23/15	3/17/17	Contig	SC	SAMEA1031502	GCA_001109505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/505/GCA_001109505.1_6753_5_20	-	RBH09
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04821	41.2	-	FINX01	23	2063	1945	2/10/16	3/19/17	Contig	SC	SAMEA1566165	GCA_900053195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/195/GCA_900053195.1_8337_6_46	-	BM471
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.29468	38.2	-	FJNK01	23	3013	2907	2/27/16	3/27/17	Contig	SC	SAMEA2059979	GCA_900070145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/070/145/GCA_900070145.1_10060_4_33	-	2531STDY5467314
Shigella sonnei	624	PRJEB2460	204320	Proteobacteria	Gammaproteobacteria	4.57197	50.7	-	CXFS01	374	4967	4400	7/16/15	2/24/17	Scaffold	SC	SAMEA1027734	GCA_001254135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/135/GCA_001254135.1_6350_1_21	-	F3183_PFGE 2A
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.22219	68	-	LXCP01	199	7521	6878	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208767	GCA_001980315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/315/GCA_001980315.1_ASM198031v1	-	MSHR4504
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.04022	47.5	-	MWHO01	105	3872	3703	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263853	GCA_002098835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/835/GCA_002098835.1_ASM209883v1	28219321	CISM_100
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.32607	29.2	-	FAET01	1652	3880	3649	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664210	GCA_900008465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/465/GCA_900008465.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.13077	45.2	-	LKQE01	35	4855	4648	4/28/16	3/20/17	Contig	FDA/CFSAN	SAMN04145919	GCA_001634185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/185/GCA_001634185.1_ASM163418v1	27315090	CFSAN025056
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.40543	57.2	-	LEYR01	8	5482	5243	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280346	GCA_001032815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/815/GCA_001032815.1_Kleb_pneu_CHS205_V1	-	CHS205
Enterococcus faecalis	1351	PRJEB14498	336287	Terrabacteria group	Firmicutes	2.63349	37.7	-	FLUS01	76	2674	2564	8/3/16	3/28/17	Contig	JLU	SAMEA4051743	GCA_900092155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/155/GCA_900092155.1_Ef_S1_01	-	-
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.82227	67.9	-	CSNJ01	471	3765	3269	3/22/15	3/26/17	Scaffold	SC	SAMEA751508	GCA_001210185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/185/GCA_001210185.1_5476_6_10	-	B015
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.77684	31.2	-	FBER01	40	1871	1761	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683178	GCA_001493235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/235/GCA_001493235.1_SS_2326	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.0294	55.1	-	FKEQ01	53	4962	4733	4/6/16	3/28/17	Scaffold	SC	SAMEA2273184	GCA_900077285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/285/GCA_900077285.1_12045_4_56	-	e533
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.43312	64	-	FSMS01	38	5544	5348	12/14/16	3/21/17	Contig	SC	SAMEA2157101	GCA_900139245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/245/GCA_900139245.1_10465_1_70	-	699
Pseudomonas sp. NFACC47-1	1566199	PRJEB17849	353222	Proteobacteria	Gammaproteobacteria	5.95136	62	-	FPKC01	52	5237	5097	11/17/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159442	GCA_900119425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/425/GCA_900119425.1_IMG-taxon_2599185304_annotated_assembly	-	NFACC47-1
Streptomyces sp. SM8	1195457	PRJNA167560	167560	Terrabacteria group	Actinobacteria	7.15208	73.3	-	AMPN01	513	6671	6577	9/24/12	1/8/14	Contig	"Environmental Research Institute, University College Cork, Ireland"	SAMN02471466	GCA_000299175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/299/175/GCA_000299175.1_StrepSM8	-	SM8
Streptomyces sp. NRRL F-5008	1463853	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.24718	72	-	JOHW01	83	-	-	7/2/14	7/2/14	Contig	University of Illinois	SAMN02645491	GCA_000719825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/719/825/GCA_000719825.1_ASM71982v1	-	NRRL F-5008
Pseudomonas sp. NFPP09	1566211	PRJEB17894	353800	Proteobacteria	Gammaproteobacteria	6.96046	63.4	-	FPJV01	22	6296	6151	11/17/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159479	GCA_900119575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/575/GCA_900119575.1_IMG-taxon_2599185161_annotated_assembly	-	NFPP09
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.09552	64.1	-	FSMR01	14	5101	5001	12/14/16	3/21/17	Contig	SC	SAMEA1963842	GCA_900139255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/255/GCA_900139255.1_10465_1_71	-	703
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.06808	55.6	-	FKES01	50	5076	4826	4/6/16	3/28/17	Scaffold	SC	SAMEA2273186	GCA_900077295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/295/GCA_900077295.1_12045_4_58	-	e545
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.5524	31.9	-	FBPJ01	20	1543	1485	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683465	GCA_001493275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/275/GCA_001493275.1_H132840800	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.73009	67.6	-	CSNY01	1028	3771	3023	3/23/15	3/26/17	Scaffold	SC	SAMEA751145	GCA_001210765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/765/GCA_001210765.1_5601_2_1	-	B082
Enterococcus faecalis	1351	PRJEB16244	348966	Terrabacteria group	Firmicutes	3.058	37.1	-	FNIP01	39	3153	2997	10/20/16	3/28/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487774	GCA_900103995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/995/GCA_900103995.1_IMG-taxon_2606217756_annotated_assembly	-	VTM1R91
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.80871	57	-	LEYS01	11	5796	5530	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280347	GCA_001032845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/845/GCA_001032845.1_Kleb_pneu_CHS206_V1	-	CHS206
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.13685	45.2	-	LKQF01	35	4856	4657	4/28/16	3/20/17	Contig	FDA/CFSAN	SAMN04145920	GCA_001634205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/205/GCA_001634205.1_ASM163420v1	27315090	CFSAN025057
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.11322	28.6	-	FAGN01	527	3761	3630	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664257	GCA_900008475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/475/GCA_900008475.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.16235	47.6	-	MWHP01	112	4007	3852	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263852	GCA_002098845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/845/GCA_002098845.1_ASM209884v1	28219321	CISM_091
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.96619	68	-	LXCQ01	127	7265	6692	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208768	GCA_001980335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/335/GCA_001980335.1_ASM198033v1	-	MSHR4637
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.35098	50.8	-	CXAW01	343	4636	4157	7/16/15	2/24/17	Scaffold	SC	SAMEA954639	GCA_001254155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/155/GCA_001254155.1_5008_7_7	-	Sh65623_401060
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.34894	38.3	-	FJNJ01	22	3054	2945	2/27/16	3/27/17	Contig	SC	SAMEA2060117	GCA_900070155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/070/155/GCA_900070155.1_10060_4_69	-	2531STDY5467350
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.01594	41.2	-	FIPU01	24	2053	1933	2/10/16	3/19/17	Contig	SC	SAMEA1566137	GCA_900053205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/205/GCA_900053205.1_8525_5_33	-	SS28
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.17207	35.4	-	CPXU01	50	2254	2107	3/23/15	3/17/17	Contig	SC	SAMEA1031471	GCA_001109825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/825/GCA_001109825.1_6753_5_26	-	B81VD
Acinetobacter baumannii 1465485	1310649	PRJNA194725	194725	Proteobacteria	Gammaproteobacteria	4.25388	39.1	-	JEWT01	230	4303	3895	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02380516	GCA_000581175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/175/GCA_000581175.1_ASM58117v1	-	1465485
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.3552	66.4	-	JUAN01	83	6027	5760	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105392	GCA_000796785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/785/GCA_000796785.1_AZPAE12149	25367914	AZPAE12149
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.124	51.6	-	FEWI01	69	2465	2106	2/9/16	3/21/17	Scaffold	SC	SAMEA2674149	GCA_900017065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/065/GCA_900017065.1_14324_4_70	-	2842STDY5881315
Helicobacter pylori D33	1249613	PRJNA178929	178929	Proteobacteria	delta/epsilon subdivisions	1.54515	38.9	-	ANIO01	64	1541	1394	6/18/14	3/24/17	Contig	Qingdao municipal Hospital	SAMN02866191	GCA_000709945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/945/GCA_000709945.1_D33	24914326	D33
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.0198	39.6	-	CLAN01	71	2214	2003	3/21/15	3/4/17	Contig	SC	SAMEA1025540	GCA_001094685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/685/GCA_001094685.1_6841_7_19	-	SMRU1339
Escherichia coli H120	656383	PRJNA38971	38971	Proteobacteria	Gammaproteobacteria	5.09102	50.4	-	AEHV01	51	5368	4830	2/23/11	2/22/17	Scaffold	Broad Institute	SAMN02595403	GCA_000190855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/855/GCA_000190855.1_ASM19085v1	-	H120
Mycobacterium tuberculosis M987	1448611	PRJNA235621	235621	Terrabacteria group	Actinobacteria	4.43848	65.5	-	JKQD01	7	4292	4093	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598957	GCA_000654255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/255/GCA_000654255.1_Myco_tube_M987_V1	-	M987
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.91377	37.9	-	LHSE01	28	2947	2847	8/6/15	2/28/17	Contig	FDA/CFSAN	SAMN03002788	GCA_001257495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/495/GCA_001257495.1_CFSAN023468_01.0	-	CFSAN023468
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.75188	30.2	-	CUNN01	34	1870	1716	3/31/15	3/18/17	Contig	SC	SAMEA1010311	GCA_001235765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/765/GCA_001235765.1_7065_7_62	-	OXC6410
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20122045	1412573	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007416.2/CP007416.2	-	1	4706	4445	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384294	GCA_000625975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/975/GCA_000625975.2_ASM62597v2	24786953	EC20122045
Staphylococcus aureus M0654	1388435	PRJNA216606	216606	Terrabacteria group	Firmicutes	2.84038	32.8	-	JBDQ01	46	2989	2813	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325559	GCA_000528035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/035/GCA_000528035.1_Stap_aure_M0654_V1	-	M0654
Staphylococcus aureus M0656	1388437	PRJNA216608	216608	Terrabacteria group	Firmicutes	2.90174	32.9	-	JBDO01	69	3076	2897	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325561	GCA_000528055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/055/GCA_000528055.1_Stap_aure_M0656_V1	-	M0656
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20123395	1412495	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68579	52.2	chromosome:NZ_CP007417.2/CP007417.2	-	1	4706	4446	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384216	GCA_000625995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/625/995/GCA_000625995.2_ASM62599v2	24786953	SA20123395
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.68116	30.3	-	CULE01	17	1775	1652	3/31/15	3/18/17	Contig	SC	SAMEA1010495	GCA_001235825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/825/GCA_001235825.1_7038_3_94	-	OXC6344
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.91963	37.9	-	LHSC01	40	2952	2853	8/6/15	2/28/17	Contig	FDA/CFSAN	SAMN02990456	GCA_001257505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/505/GCA_001257505.1_CFSAN023484_01.0	-	MOD1_LS1010
Mycobacterium tuberculosis M990	1448612	PRJNA235623	235623	Terrabacteria group	Actinobacteria	4.43313	65.5	-	JKQC01	6	4284	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598958	GCA_000654275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/275/GCA_000654275.1_Myco_tube_M990_V1	-	M990
Escherichia coli H252	656388	PRJNA38981	38981	Proteobacteria	Gammaproteobacteria	5.26697	50.5	-	AEFI01	85	5603	5214	2/23/11	2/22/17	Scaffold	Broad Institute	SAMN02595398	GCA_000190895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/895/GCA_000190895.1_ASM19089v1	-	H252
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.04516	39.6	-	CLFO01	56	2223	2027	3/21/15	3/4/17	Contig	SC	SAMEA1025711	GCA_001094705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/705/GCA_001094705.1_6925_3_16	-	SMRU2128
Helicobacter pylori	210	PRJNA259568	259568	Proteobacteria	delta/epsilon subdivisions	1.57747	38.7	-	JQNY01	58	1564	1399	10/10/14	3/24/17	Contig	Oita University	SAMN03009498	GCA_000766025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/766/025/GCA_000766025.1_ASM76602v1	25299127	Taiwan-47
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.1585	51.6	-	FEXV01	79	2497	2170	2/9/16	3/19/17	Scaffold	SC	SAMEA2674514	GCA_900017075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/075/GCA_900017075.1_14355_7_48	-	2842STDY5881677
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.52204	66.3	-	JUAP01	114	6242	5916	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105390	GCA_000796795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/795/GCA_000796795.1_AZPAE12147	25367914	AZPAE12147
Acinetobacter baumannii 400834	1310616	PRJNA194692	194692	Proteobacteria	Gammaproteobacteria	4.10016	39.1	-	JEXA01	211	4107	3790	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02380523	GCA_000581235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/235/GCA_000581235.1_ASM58123v1	-	400834
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.07155	35.1	-	CPZW01	14	2136	2015	3/23/15	3/17/17	Contig	SC	SAMEA1031473	GCA_001110105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/105/GCA_001110105.1_6753_5_18	-	RBH07
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05922	41.1	-	FIPY01	30	2062	1954	2/10/16	3/19/17	Contig	SC	SAMEA1566109	GCA_900053215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/215/GCA_900053215.1_8525_5_36	-	SS31
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.51329	38.3	-	FJNL01	39	3239	3090	2/27/16	3/27/17	Contig	SC	SAMEA1967227	GCA_900070165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/070/165/GCA_900070165.1_10060_4_92	-	2531STDY5467373
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.80185	50.7	-	CXGK01	393	5274	4653	7/16/15	2/24/17	Scaffold	SC	SAMEA1013673	GCA_001254195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/195/GCA_001254195.1_6551_1_8	-	SS128220_2798530
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.94064	68	-	LXCR01	138	7255	6677	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208769	GCA_001980365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/365/GCA_001980365.1_ASM198036v1	-	MSHR4638
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.04011	47.5	-	MWHR01	110	3843	3691	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263850	GCA_002098875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/875/GCA_002098875.1_ASM209887v1	28219321	CISM_0079
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.09223	28.3	-	FAHT01	227	3747	3651	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664287	GCA_900008495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/495/GCA_900008495.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.12696	45.2	-	LKQG01	35	4841	4647	4/28/16	3/20/17	Contig	FDA/CFSAN	SAMN04145921	GCA_001634215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/215/GCA_001634215.1_ASM163421v1	27315090	CFSAN025058
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.65818	57.2	-	LEYT01	8	5759	5495	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280348	GCA_001032855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/855/GCA_001032855.1_Kleb_pneu_CHS207_V1	-	CHS207
Enterococcus faecalis ATCC 29212	1201292	PRJEB17655	352496	Terrabacteria group	Firmicutes	3.09625	37.2	-	FPDW01	55	3210	3040	11/7/16	3/28/17	Contig	URMITE	SAMEA4534525	GCA_900117305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/305/GCA_900117305.1_PRJEB17655	-	G824
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.82949	67.8	-	CSPE01	583	3797	3233	3/23/15	3/26/17	Scaffold	SC	SAMEA751364	GCA_001210865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/865/GCA_001210865.1_5633_3_8	-	B189
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.6998	31.4	-	FBHQ01	45	1779	1689	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683264	GCA_001493315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/315/GCA_001493315.1_UNES15	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.41761	55.4	-	FKET01	100	5433	5147	4/6/16	4/20/17	Scaffold	SC	SAMEA2273122	GCA_900077305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/305/GCA_900077305.1_12045_4_1	-	e54
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.06881	64.2	-	FSMU01	16	5035	4939	12/14/16	3/21/17	Contig	SC	SAMEA1973117	GCA_900139275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/275/GCA_900139275.1_10465_1_74	-	721
Pseudomonas sp. NFPP14	1566206	PRJEB17895	353801	Proteobacteria	Gammaproteobacteria	6.84388	63.5	-	FPKG01	20	6260	6131	11/17/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159345	GCA_900119635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/635/GCA_900119635.1_IMG-taxon_2599185356_annotated_assembly	-	NFPP14
Streptomyces sp. NRRL WC-3773	1463936	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.61725	72.1	-	JOJI01	280	-	-	7/2/14	7/2/14	Contig	University of Illinois	SAMN02645529	GCA_000720305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/720/305/GCA_000720305.1_ASM72030v1	-	NRRL WC-3773
Streptomyces sp. NRRL WC-3683	1463928	PRJNA238534	238534	Terrabacteria group	Actinobacteria	11.8246	71.5	-	JOJG01	3268	-	-	7/2/14	7/2/14	Contig	University of Illinois	SAMN02645527	GCA_000721645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/721/645/GCA_000721645.1_ASM72164v1	-	NRRL WC-3683
Pseudomonas sp. NFACC43	1566203	PRJEB17848	353221	Proteobacteria	Gammaproteobacteria	5.95493	62	-	FPKK01	44	5240	5100	11/17/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159352	GCA_900119645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/645/GCA_900119645.1_IMG-taxon_2599185302_annotated_assembly	-	NFACC43
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.24832	64.1	-	FSMW01	35	5306	5156	12/14/16	3/21/17	Contig	SC	SAMEA2150512	GCA_900139295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/295/GCA_900139295.1_10465_1_75	-	722
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.82057	55.5	-	FKER01	51	4727	4485	4/6/16	3/28/17	Scaffold	SC	SAMEA2273185	GCA_900077315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/315/GCA_900077315.1_12045_4_57	-	e534
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.78712	31.1	-	FBGC01	19	1853	1748	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683225	GCA_001493335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/335/GCA_001493335.1_1535	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.80038	67.8	-	CSQM01	338	3687	3248	3/23/15	3/26/17	Scaffold	SC	SAMEA751457	GCA_001211005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/005/GCA_001211005.1_5476_8_6	-	B281
Enterococcus faecalis ATCC 29212	1201292	PRJEB17657	352498	Terrabacteria group	Firmicutes	3.25366	37	-	FPDZ01	48	3318	3089	11/7/16	3/28/17	Contig	URMITE	SAMEA4534527	GCA_900117325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/325/GCA_900117325.1_PRJEB17657	-	G882
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.57196	57.3	-	LEYU01	8	5627	5354	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280349	GCA_001032875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/875/GCA_001032875.1_Kleb_pneu_CHS208_V1	-	CHS208
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.11252	45.3	-	LHAX01	76	4910	4703	7/28/16	4/17/17	Contig	FDA/CFSAN	SAMN03941063	GCA_001695935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/935/GCA_001695935.1_ASM169593v1	28330888	CFSAN018755
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.18511	28.8	-	FAHX01	1061	3788	3637	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664291	GCA_900008515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/515/GCA_900008515.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.03655	47.5	-	MWHQ01	95	3838	3689	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263851	GCA_002098885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/885/GCA_002098885.1_ASM209888v1	28219321	CISM_0091
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.38143	67.9	-	LXCS01	181	7683	7040	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208770	GCA_001980385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/385/GCA_001980385.1_ASM198038v1	-	MSHR4735
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.71525	50.6	-	CXKB01	390	5328	4537	7/16/15	2/24/17	Scaffold	SC	SAMEA2003437	GCA_001254215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/215/GCA_001254215.1_8290_4_33	-	99020
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.49392	38.3	-	FJNG01	30	3189	3061	2/27/16	3/27/17	Contig	SC	SAMEA2059862	GCA_900070185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/070/185/GCA_900070185.1_10060_4_27	-	2531STDY5467308
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.10254	41.1	-	FIRA01	23	2133	2016	2/10/16	3/19/17	Contig	SC	SAMEA1566134	GCA_900053225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/225/GCA_900053225.1_8525_5_64	-	SS101
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.03339	35.3	-	CQDG01	14	2097	1993	3/23/15	3/17/17	Contig	SC	SAMEA1031457	GCA_001111745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/745/GCA_001111745.1_6753_5_27	-	B81VS
Acinetobacter baumannii 625974	1310607	PRJNA194683	194683	Proteobacteria	Gammaproteobacteria	4.06975	39	-	JEXD01	132	4059	3734	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02380526	GCA_000581255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/255/GCA_000581255.1_ASM58125v1	-	625974
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.65098	66.3	-	JUAO01	54	6334	6141	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105391	GCA_000796825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/825/GCA_000796825.1_AZPAE12148	25367914	AZPAE12148
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.19614	51.6	-	FEYF01	97	2579	2214	2/9/16	3/19/17	Scaffold	SC	SAMEA2674453	GCA_900017085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/085/GCA_900017085.1_14355_8_9	-	2842STDY5881734
Helicobacter pylori	210	PRJNA259567	259567	Proteobacteria	delta/epsilon subdivisions	1.53981	38.9	-	JRAC01	38	1535	1365	10/10/14	3/24/17	Contig	Oita University	SAMN03009497	GCA_000766035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/766/035/GCA_000766035.1_ASM76603v1	25299127	Manado-1
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.04487	39.7	-	CLVU01	58	2232	1996	3/21/15	3/4/17	Contig	SC	SAMEA1025767	GCA_001094785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/785/GCA_001094785.1_6983_4_75	-	SMRU2283
Escherichia coli H263	656390	PRJNA38985	38985	Proteobacteria	Gammaproteobacteria	5.23907	50.5	-	AEFJ01	64	5477	5032	2/23/11	2/22/17	Scaffold	Broad Institute	SAMN02595399	GCA_000190915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/915/GCA_000190915.1_ASM19091v1	-	H263
Mycobacterium tuberculosis M991	1448613	PRJNA235624	235624	Terrabacteria group	Actinobacteria	4.42815	65.5	-	JKQB01	4	4299	4092	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598959	GCA_000654295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/295/GCA_000654295.1_Myco_tube_M991_V1	-	M991
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.92262	37.9	-	LHSB01	55	2947	2849	8/6/15	2/28/17	Contig	FDA/CFSAN	SAMN02991383	GCA_001257515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/515/GCA_001257515.1_CFSAN023497_01.0	-	MOD1_LS996
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.73352	30.2	-	CUQS01	14	1835	1711	3/31/15	3/18/17	Contig	SC	SAMEA1010554	GCA_001235925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/925/GCA_001235925.1_7092_1_52	-	OXC6499
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20130345	1412588	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007418.2/CP007418.2	-	1	4708	4450	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384309	GCA_000626015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/015/GCA_000626015.2_ASM62601v2	24786953	EC20130345
Staphylococcus aureus M0657	1388438	PRJNA216609	216609	Terrabacteria group	Firmicutes	2.92053	32.9	-	JBDN01	69	3090	2906	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325562	GCA_000528075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/075/GCA_000528075.1_Stap_aure_M0657_V1	-	M0657
Staphylococcus aureus M0658	1388439	PRJNA216610	216610	Terrabacteria group	Firmicutes	2.91377	32.7	-	JBDM01	69	3091	2962	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325563	GCA_000528095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/095/GCA_000528095.1_Stap_aure_M0658_V1	-	M0658
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20130346	1412589	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007419.2/CP007419.2	-	1	4707	4446	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384310	GCA_000626035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/035/GCA_000626035.2_ASM62603v2	24786953	EC20130346
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.828	30.3	-	CUKB01	30	1985	1879	3/31/15	3/18/17	Contig	SC	SAMEA1010607	GCA_001235965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/965/GCA_001235965.1_7038_3_67	-	OXC6317
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.917	37.9	-	LHSD01	36	2951	2848	8/6/15	2/28/17	Contig	FDA/CFSAN	SAMN02990454	GCA_001257525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/525/GCA_001257525.1_CFSAN023482_01.0	-	MOD1_LS1004
Mycobacterium tuberculosis M1004	1448614	PRJNA235625	235625	Terrabacteria group	Actinobacteria	4.42903	65.6	-	JKQA01	5	4280	4103	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598960	GCA_000654315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/315/GCA_000654315.1_Myco_tube_M1004_V1	-	M1004
Escherichia coli M863	656420	PRJNA39045	39045	Proteobacteria	Gammaproteobacteria	5.28796	50.2	-	AEHZ01	66	5517	4964	2/23/11	2/22/17	Scaffold	Broad Institute	SAMN02595407	GCA_000190955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/955/GCA_000190955.1_ASM19095v1	-	M863
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.00836	39.7	-	CQUQ01	55	2187	1958	3/23/15	3/11/17	Contig	SC	SAMEA1025524	GCA_001094825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/825/GCA_001094825.1_6710_6_21	-	SMRU1365
Helicobacter pylori	210	PRJEB6882	265957	Proteobacteria	delta/epsilon subdivisions	1.64227	38.8	-	CCMU01	51	1617	1444	10/31/14	3/25/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA2674915	GCA_000824865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/865/GCA_000824865.1_H3014	25218701	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11243	51.8	-	FEZD01	61	2447	2114	2/9/16	3/21/17	Scaffold	SC	SAMEA2674157	GCA_900017095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/095/GCA_900017095.1_14555_5_20	-	2842STDY5881361
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.02228	65.8	-	JTWS01	233	6803	6476	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105491	GCA_000796845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/845/GCA_000796845.1_AZPAE14714	25367914	AZPAE14714
Acinetobacter baumannii 99063	1310630	PRJNA194706	194706	Proteobacteria	Gammaproteobacteria	4.41721	39.1	-	JEXJ01	509	4474	3886	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02380532	GCA_000581295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/295/GCA_000581295.1_ASM58129v1	-	99063
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.12613	35.2	-	CPVQ01	42	2213	2100	3/23/15	3/17/17	Contig	SC	SAMEA1031531	GCA_001115545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/545/GCA_001115545.1_6753_5_22	-	RBH12
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04634	41.1	-	FITH01	25	2070	1943	2/10/16	3/19/17	Contig	SC	SAMEA1566090	GCA_900053235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/235/GCA_900053235.1_8525_5_14	-	FX507_1
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.40077	38.3	-	CCZA01	42	3087	2916	10/21/14	3/25/17	Scaffold	ROSLIN	SAMEA2627142	GCA_000823305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/305/GCA_000823305.1_12_3965	-	12_3965
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.86145	50.4	-	CXLP01	460	5516	4664	7/16/15	2/24/17	Scaffold	SC	SAMEA1971157	GCA_001254235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/235/GCA_001254235.1_8290_5_11	-	36230921
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.37489	67.9	-	LXCT01	174	7677	7047	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208771	GCA_001980395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/395/GCA_001980395.1_ASM198039v1	-	MSHR4736
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.03567	47.5	-	MWHS01	95	3834	3689	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263849	GCA_002098915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/915/GCA_002098915.1_ASM209891v1	28219321	CISM_0074
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.5046	29	-	FAHY01	767	4169	4018	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664292	GCA_900008525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/525/GCA_900008525.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.0736	45.3	-	LHAW01	60	4853	4681	7/28/16	4/17/17	Contig	FDA/CFSAN	SAMN03941062	GCA_001695945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/945/GCA_001695945.1_ASM169594v1	28330888	CFSAN018754
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.91996	56.9	-	LEYV01	10	6020	5735	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280350	GCA_001032895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/895/GCA_001032895.1_Kleb_pneu_CHS209_V1	-	CHS209
Enterococcus faecalis ATCC 29212	1201292	PRJEB17656	352497	Terrabacteria group	Firmicutes	2.97208	37.3	-	FPEB01	40	3050	2863	11/7/16	3/28/17	Contig	URMITE	SAMEA4534526	GCA_900117335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/335/GCA_900117335.1_PRJEB17656	-	G881
Enterococcus faecium	1352	PRJEB13267	325766	Terrabacteria group	Firmicutes	3.00814	37.7	-	FKLJ01	194	3166	2892	6/15/16	3/28/17	Contig	UNIVERSITY OF WARWICK	SAMEA3935368	GCA_900080015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/015/GCA_900080015.1_Isolate_20	-	-
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.72803	67.5	-	CSOK01	631	3712	3040	3/22/15	3/26/17	Scaffold	SC	SAMEA1931537	GCA_001211225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/225/GCA_001211225.1_5463_5_5	-	B315
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68767	31.3	-	FBGI01	27	1755	1657	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683236	GCA_001493355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/355/GCA_001493355.1_CCN60	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.20099	54.7	-	FKEV01	66	5233	4952	4/6/16	3/28/17	Scaffold	SC	SAMEA2273187	GCA_900077325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/325/GCA_900077325.1_12045_4_59	-	e552
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23234	64.2	-	FVUA01	33	5258	5107	3/10/17	3/18/17	Contig	SC	SAMEA2071132	GCA_900139315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/315/GCA_900139315.1_10625_4_1	-	1
Pseudomonas sp. NFACC49-2	1566222	PRJEB17850	353219	Proteobacteria	Gammaproteobacteria	5.96959	62	-	FPKL01	70	5303	5130	11/17/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159390	GCA_900119655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/655/GCA_900119655.1_IMG-taxon_2599185309_annotated_assembly	-	NFACC49-2
Streptomyces sp. RSD-27	1571774	PRJNA267035	267035	Terrabacteria group	Actinobacteria	7.93145	72.6	-	JWZS01	2354	8265	7447	1/12/15	1/12/15	Contig	NORTH EAST INSTITUTE OF SCIENCE AND TECHNOLOGY-CSIR	SAMN03177439	GCA_000817655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/655/GCA_000817655.1_ASM81765v1	-	RSD-27
Streptomyces sp. MBRL 10	1592727	PRJNA271786	271786	Terrabacteria group	Actinobacteria	4.29491	71.3	-	JXOL01	1042	3636	1749	2/24/15	2/24/15	Contig	National Centre for Cell Science	SAMN03277058	GCA_000932185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/932/185/GCA_000932185.1_ASM93218v1	-	MBRL 10
Pseudomonas sp. NFPP16	1566204	PRJEB17897	353802	Proteobacteria	Gammaproteobacteria	6.84254	63.5	-	FPKJ01	20	6263	6132	11/17/16	4/16/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159327	GCA_900119675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/675/GCA_900119675.1_IMG-taxon_2600255313_annotated_assembly	-	NFPP16
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.12948	64.2	-	FVTW01	17	5119	4982	3/10/17	3/18/17	Contig	SC	SAMEA2070155	GCA_900139325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/325/GCA_900139325.1_10625_4_11	-	11
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.00238	55.1	-	FKEW01	29	4885	4687	4/6/16	3/28/17	Scaffold	SC	SAMEA2273188	GCA_900077335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/335/GCA_900077335.1_12045_4_60	-	e554
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68429	31.3	-	FAZE01	15	1746	1645	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683031	GCA_001493395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/395/GCA_001493395.1_H095340114a	-	n/a
Bordetella pertussis	520	PRJEB2103	203747	Proteobacteria	Betaproteobacteria	3.7987	67.8	-	CSRP01	538	3729	3229	3/22/15	3/26/17	Scaffold	SC	SAMEA751376	GCA_001211645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/645/GCA_001211645.1_4846_8_6	-	B235
Enterococcus faecium	1352	PRJEB13267	325766	Terrabacteria group	Firmicutes	3.01333	37.8	-	FKLD01	159	3173	2932	6/15/16	3/28/17	Contig	UNIVERSITY OF WARWICK	SAMEA3935373	GCA_900080025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/025/GCA_900080025.1_Isolate_25	-	-
Enterococcus faecalis ATCC 29212	1201292	PRJEB17653	352495	Terrabacteria group	Firmicutes	2.89971	37.4	-	FPDY01	56	2976	2809	11/7/16	3/28/17	Contig	URMITE	SAMEA4534524	GCA_900117345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/345/GCA_900117345.1_PRJEB17653	-	G823
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.95423	57	-	LEYW01	9	6034	5735	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280351	GCA_001032925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/925/GCA_001032925.1_Kleb_pneu_CHS210_V1	-	CHS210
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.13851	45.2	-	LHAU01	66	4857	4656	7/28/16	4/17/17	Contig	FDA/CFSAN	SAMN03941060	GCA_001695955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/955/GCA_001695955.1_ASM169595v1	28330888	CFSAN018752
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	3.92966	28.6	-	FAIB01	986	3542	3367	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664294	GCA_900008545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/545/GCA_900008545.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.03464	47.5	-	MWHT01	85	3838	3686	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263848	GCA_002098935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/935/GCA_002098935.1_ASM209893v1	28219321	CISM_0035
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.31104	67.9	-	LXCU01	325	7648	6937	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208772	GCA_001980425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/425/GCA_001980425.1_ASM198042v1	-	MSHR4737
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.77155	50.7	-	CWUZ01	389	5328	4541	7/16/15	2/24/17	Scaffold	SC	SAMEA3345065	GCA_001254275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/275/GCA_001254275.1_Sg_201312542_TCGAAG_L001	-	201312542_1
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.38401	38.2	-	CCZB01	29	3082	2918	10/21/14	3/25/17	Scaffold	ROSLIN	SAMEA2627143	GCA_000823325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/325/GCA_000823325.1_12_4030	-	12_4030
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.13481	41	-	FIGZ01	50	2144	1998	2/10/16	3/19/17	Contig	SC	SAMEA1316701	GCA_900053595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/595/GCA_900053595.1_7114_5_44	-	LSS44
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.03122	35.3	-	CQDB01	17	2074	1962	3/23/15	3/17/17	Contig	SC	SAMEA1031491	GCA_001124065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/065/GCA_001124065.1_6753_5_6	-	B50VD
Acinetobacter baumannii 972082	1310563	PRJNA194639	194639	Proteobacteria	Gammaproteobacteria	3.98149	39	-	JFAA01	276	3910	3595	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02371058	GCA_000581315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/315/GCA_000581315.1_ASM58131v1	-	972082
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.59445	66	-	JUAM01	114	6337	6053	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105393	GCA_000796865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/865/GCA_000796865.1_AZPAE12150	25367914	AZPAE12150
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.18246	51.4	-	FFCM01	99	2506	2142	2/9/16	3/21/17	Scaffold	SC	SAMEA2674161	GCA_900017215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/215/GCA_900017215.1_14555_6_14	-	2842STDY5881451
Helicobacter pylori	210	PRJEB6882	265957	Proteobacteria	delta/epsilon subdivisions	1.65575	38.8	-	CCMW01	50	1624	1454	10/31/14	3/25/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA2674918	GCA_000824925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/925/GCA_000824925.1_H3018	25218701	-
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.19637	39.8	-	CLYC01	58	2435	2214	3/21/15	3/11/17	Contig	SC	SAMEA1028684	GCA_001094845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/845/GCA_001094845.1_6983_6_43	-	SMRU2347
Escherichia coli TA007	656429	PRJNA39063	39063	Proteobacteria	Gammaproteobacteria	5.29932	50.5	-	AEHY01	97	5614	4870	2/23/11	8/8/17	Scaffold	Broad Institute	SAMN02595406	GCA_000190975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/975/GCA_000190975.1_ASM19097v1	-	TA007
Mycobacterium tuberculosis M992	1448615	PRJNA235626	235626	Terrabacteria group	Actinobacteria	4.4295	65.6	-	JKPZ01	73	4331	4119	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598961	GCA_000654335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/335/GCA_000654335.1_Myco_tube_M992_V1	-	M992
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.92013	37.9	-	LHSF01	42	2947	2848	8/6/15	2/28/17	Contig	FDA/CFSAN	SAMN03002785	GCA_001257575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/575/GCA_001257575.1_CFSAN023465_01.0	-	CFSAN023465
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.65944	30.4	-	CUUH01	28	1761	1656	3/31/15	3/18/17	Contig	SC	SAMEA1401556	GCA_001235985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/985/GCA_001235985.1_7213_3_5	-	OXC6548
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20130347	1412590	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007423.1/CP007423.2	-	1	4709	4450	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384311	GCA_000626055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/055/GCA_000626055.2_ASM62605v2	24786953	EC20130347
Staphylococcus aureus M0659	1388440	PRJNA216611	216611	Terrabacteria group	Firmicutes	2.84914	32.8	-	JBDL01	36	2991	2818	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325564	GCA_000528115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/115/GCA_000528115.1_Stap_aure_M0659_V1	-	M0659
Staphylococcus aureus M0664	1388442	PRJNA216613	216613	Terrabacteria group	Firmicutes	2.88903	32.9	-	JBDJ01	64	3061	2880	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325566	GCA_000528135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/135/GCA_000528135.1_Stap_aure_M0664_V1	-	M0664
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20130348	1412591	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007424.2/CP007424.2	-	1	4709	4446	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384312	GCA_000626075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/075/GCA_000626075.2_ASM62607v2	24786953	EC20130348
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.63899	30.4	-	CULJ01	14	1722	1596	3/31/15	3/18/17	Contig	SC	SAMEA1010431	GCA_001236085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/085/GCA_001236085.1_7065_7_11	-	OXC6357
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.91598	37.9	-	LHRY01	34	2947	2849	8/6/15	2/28/17	Contig	FDA/CFSAN	SAMN02991394	GCA_001257585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/585/GCA_001257585.1_CFSAN023508_01.0	-	MOD1_LS1011
Mycobacterium tuberculosis M995	1448616	PRJNA235627	235627	Terrabacteria group	Actinobacteria	4.4125	65.6	-	JKPY01	6	4264	4085	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598962	GCA_000654355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/355/GCA_000654355.1_Myco_tube_M995_V1	-	M995
Escherichia coli TW10509	656449	PRJNA39103	39103	Proteobacteria	Gammaproteobacteria	5.38895	50.3	-	AEHW01	45	5557	5096	2/23/11	2/22/17	Scaffold	Broad Institute	SAMN02595404	GCA_000190995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/190/995/GCA_000190995.1_ASM19099v1	-	TW10509
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.0312	39.6	-	CMDF01	67	2242	1992	3/21/15	3/11/17	Contig	SC	SAMEA1028851	GCA_001094965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/965/GCA_001094965.1_7011_3_2	-	SMRU2738
Helicobacter pylori	210	PRJNA286817	286817	Proteobacteria	delta/epsilon subdivisions	1.61777	38.7	-	LEOV01	51	1648	1445	7/9/15	3/26/17	Contig	University of Malaya-University of Western Australia	SAMN03770843	GCA_001051445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/445/GCA_001051445.1_ASM105144v1	-	UM520
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.17182	51.5	-	FFEE01	87	2538	2168	2/9/16	3/21/17	Scaffold	SC	SAMEA2674330	GCA_900017225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/225/GCA_900017225.1_14555_6_89	-	2842STDY5881526
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.33203	66.5	-	JUAL01	65	6001	5824	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105394	GCA_000796875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/875/GCA_000796875.1_AZPAE12151	25367914	AZPAE12151
Acinetobacter baumannii 959073	1310557	PRJNA194633	194633	Proteobacteria	Gammaproteobacteria	4.04189	39.2	-	JEZZ01	474	4101	3741	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02371057	GCA_000581335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/335/GCA_000581335.1_ASM58133v1	-	959073
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.16015	35.3	-	CPXT01	31	2238	2132	3/23/15	3/17/17	Contig	SC	SAMEA1031441	GCA_001127125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/125/GCA_001127125.1_6753_5_7	-	B68VD
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.09313	41.1	-	FINK01	23	2107	1998	2/10/16	3/19/17	Contig	SC	SAMEA1566104	GCA_900053605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/605/GCA_900053605.1_8337_6_33	-	BM366a
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.38621	38.2	-	CCZC01	32	3086	2900	10/21/14	3/25/17	Scaffold	ROSLIN	SAMEA2627144	GCA_000823345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/345/GCA_000823345.1_12_4042	-	12_4042
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.64152	50.7	-	CXBB01	384	4990	4505	7/16/15	2/24/17	Scaffold	SC	SAMEA954635	GCA_001254295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/295/GCA_001254295.1_5008_8_12	-	ShIB694_401088
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.37502	67.9	-	LXCV01	286	7684	6989	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208773	GCA_001980435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/435/GCA_001980435.1_ASM198043v1	-	MSHR4738
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.03635	47.5	-	MWHU01	124	3805	3688	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263847	GCA_002098955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/955/GCA_002098955.1_ASM209895v1	28219321	CISM_0034
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.25498	28.4	-	FAIH01	388	3923	3791	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664301	GCA_900008555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/555/GCA_900008555.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.07596	45.2	-	LHAV01	61	4794	4599	7/28/16	4/17/17	Contig	FDA/CFSAN	SAMN03941061	GCA_001695995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/995/GCA_001695995.1_ASM169599v1	28330888	CFSAN018753
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.57628	57.2	-	LEYX01	4	5631	5372	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280352	GCA_001032935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/935/GCA_001032935.1_Kleb_pneu_CHS211_V1	-	CHS211
Enterococcus faecalis ATCC 29212	1201292	PRJEB17659	352500	Terrabacteria group	Firmicutes	2.95394	37.3	-	FPEA01	44	3052	2881	11/7/16	3/28/17	Contig	URMITE	SAMEA4534529	GCA_900117355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/355/GCA_900117355.1_PRJEB17659	-	G884
Enterococcus faecium	1352	PRJEB13267	325766	Terrabacteria group	Firmicutes	2.99839	37.8	-	FKLF01	208	3152	2846	6/15/16	3/28/17	Contig	UNIVERSITY OF WARWICK	SAMEA3935367	GCA_900080035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/035/GCA_900080035.1_Isolate_19	-	-
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.70174	67.7	-	CSSK01	938	3746	3031	3/22/15	3/26/17	Scaffold	SC	SAMEA751179	GCA_001211785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/785/GCA_001211785.1_5633_3_5	-	B173
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66096	31.4	-	FBCK01	28	1725	1634	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683124	GCA_001493415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/415/GCA_001493415.1_EC4287	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.0915	54.5	-	FKEY01	41	5029	4772	4/6/16	3/28/17	Scaffold	SC	SAMEA2273189	GCA_900077345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/345/GCA_900077345.1_12045_4_61	-	e558
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.13051	64.1	-	FSMY01	17	5155	5047	12/14/16	3/21/17	Contig	SC	SAMEA1973643	GCA_900139335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/335/GCA_900139335.1_10625_4_14	-	14
Pseudomonas sp. URIL14HWK12:I5	1261630	PRJEB20332	382104	Proteobacteria	Gammaproteobacteria	5.72373	62.1	-	FWXQ01	24	5369	5202	4/8/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660385	GCA_900176445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/445/GCA_900176445.1_IMG-taxon_2518645599_annotated_assembly	-	URIL14HWK12:I5
Streptomyces sp. MBRL 601	1592330	PRJNA271732	271732	Terrabacteria group	Actinobacteria	4.50862	71.8	-	JXOM01	1078	4210	2647	2/24/15	2/24/15	Contig	National Centre for Cell Science	SAMN03276541	GCA_000932205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/932/205/GCA_000932205.1_ASM93220v1	-	MBRL 601
Streptomyces sp. NRRL S-444	1609134	PRJNA238534	238534	Terrabacteria group	Actinobacteria	8.46789	71.7	-	JZWX01	3184	8941	8021	3/31/15	3/31/15	Contig	University of Illinois	SAMN03323302	GCA_000966985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/985/GCA_000966985.1_ASM96698v1	-	NRRL S-444
Pseudomonas sp. LAMO17WK12:I1	1265486	PRJEB20428	382910	Proteobacteria	Gammaproteobacteria	6.93233	61	-	FWZV01	34	6429	6230	4/19/17	4/22/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660912	GCA_900177315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/315/GCA_900177315.1_IMG-taxon_2521172671_annotated_assembly	-	LAMO17WK12:I1
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98157	64.2	-	FVUC01	17	4975	4826	3/10/17	3/18/17	Contig	SC	SAMEA2070590	GCA_900139355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/355/GCA_900139355.1_10625_4_12	-	12
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.89856	55.4	-	FKEZ01	46	4841	4590	4/6/16	3/28/17	Scaffold	SC	SAMEA2273190	GCA_900077355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/355/GCA_900077355.1_12045_4_62	-	e559
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65939	31.4	-	FBCR01	25	1718	1624	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683134	GCA_001493435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/435/GCA_001493435.1_EC4946	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.67378	67.3	-	CSNH01	870	3722	2914	3/23/15	3/26/17	Scaffold	SC	SAMEA1931573	GCA_001211805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/805/GCA_001211805.1_5463_5_4	-	B336
Enterococcus faecium	1352	PRJEB13267	325766	Terrabacteria group	Firmicutes	3.01104	37.8	-	FKLE01	167	3177	2931	6/15/16	3/28/17	Contig	UNIVERSITY OF WARWICK	SAMEA3935371	GCA_900080045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/045/GCA_900080045.1_Isolate_23	-	-
Enterococcus faecalis ATCC 29212	1201292	PRJEB17658	352499	Terrabacteria group	Firmicutes	2.76049	37.5	-	FPEC01	15	2759	2658	11/7/16	3/28/17	Contig	URMITE	SAMEA4534528	GCA_900117365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/365/GCA_900117365.1_PRJEB17658	-	G883
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.91154	56.9	-	LEYY01	13	6006	5716	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280354	GCA_001032965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/965/GCA_001032965.1_Kleb_pneu_CHS213_V1	-	CHS213
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	4.96924	45.3	-	LHAY01	64	4832	4613	7/28/16	4/17/17	Contig	FDA/CFSAN	SAMN03941064	GCA_001696005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/005/GCA_001696005.1_ASM169600v1	28330888	CFSAN018756
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.19575	28.7	-	FAJI01	429	3925	3772	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664332	GCA_900008565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/565/GCA_900008565.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.03349	47.5	-	MWHV01	109	3820	3685	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263846	GCA_002098965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/965/GCA_002098965.1_ASM209896v1	28219321	CISM_0019
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.3661	67.9	-	LXCW01	305	7677	6993	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208774	GCA_001980465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/465/GCA_001980465.1_ASM198046v1	-	MSHR4749
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.80259	50.5	-	CWTT01	426	5709	4535	7/16/15	2/24/17	Scaffold	SC	SAMEA3345035	GCA_001254315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/315/GCA_001254315.1_H14128036101	-	36101ss_1
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.38447	38.2	-	CCZD01	34	3090	2909	10/21/14	3/25/17	Scaffold	ROSLIN	SAMEA2627145	GCA_000823365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/365/GCA_000823365.1_12_4053	-	12_4053
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.09543	41.1	-	FIPE01	30	2110	1991	2/10/16	3/19/17	Contig	SC	SAMEA1566154	GCA_900053615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/615/GCA_900053615.1_8337_6_79	-	EN636
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.17448	35.6	-	CQBZ01	33	2253	2136	3/22/15	3/17/17	Contig	SC	SAMEA1031512	GCA_001145265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/265/GCA_001145265.1_6753_5_15	-	RBH04
Acinetobacter baumannii 942133	1310561	PRJNA194637	194637	Proteobacteria	Gammaproteobacteria	4.18351	39.7	-	JEZX01	264	4206	3907	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02371054	GCA_000581355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/355/GCA_000581355.1_ASM58135v1	-	942133
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.16892	66.5	-	JUAK01	121	5859	5604	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105395	GCA_000796905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/905/GCA_000796905.1_AZPAE12152	25367914	AZPAE12152
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12229	51.8	-	FEVB01	75	2470	2120	2/9/16	3/21/17	Scaffold	SC	SAMEA2674001	GCA_900017465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/465/GCA_900017465.1_14355_6_91	-	2842STDY5881240
Helicobacter pylori	210	PRJNA286837	286837	Proteobacteria	delta/epsilon subdivisions	1.65784	38.9	-	LFDR01	17	1639	1460	7/9/15	3/26/17	Contig	University of Malaya-University of Western Australia	SAMN03770940	GCA_001051485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/485/GCA_001051485.1_ASM105148v1	-	UM087
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06658	39.6	-	CNVT02	171	2229	2016	3/23/15	3/11/17	Contig	SC	SAMEA1032560	GCA_001095065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/065/GCA_001095065.2_6999_7_7	-	359370
Escherichia coli H489	656404	PRJNA39013	39013	Proteobacteria	Gammaproteobacteria	4.87659	50.9	-	AEHX01	33	5192	4632	2/23/11	2/22/17	Scaffold	Broad Institute	SAMN02595405	GCA_000191015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/191/015/GCA_000191015.1_ASM19101v1	-	H489
Mycobacterium tuberculosis M1007	1448617	PRJNA235628	235628	Terrabacteria group	Actinobacteria	4.41524	65.6	-	JKPX01	5	4273	4092	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598963	GCA_000654375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/375/GCA_000654375.1_Myco_tube_M1007_V1	-	M1007
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.92238	37.9	-	LHRZ01	54	2948	2849	8/6/15	2/28/17	Contig	FDA/CFSAN	SAMN02991393	GCA_001257595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/595/GCA_001257595.1_CFSAN023507_01.0	-	MOD1_LS1009
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70026	30.3	-	CUJS01	16	1793	1696	3/31/15	3/18/17	Contig	SC	SAMEA1010520	GCA_001236105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/105/GCA_001236105.1_7038_3_6	-	OXC6255
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20100103	1412458	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68583	52.2	chromosome:NZ_CP007420.2/CP007420.2	-	1	4708	4450	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384179	GCA_000626115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/115/GCA_000626115.2_ASM62611v2	24786953	EC20100103
Staphylococcus aureus M0666	1388443	PRJNA216614	216614	Terrabacteria group	Firmicutes	2.89699	32.8	-	JBDI01	73	3075	2877	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325567	GCA_000528155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/155/GCA_000528155.1_Stap_aure_M0666_V1	-	M0666
Staphylococcus aureus M0668	1388445	PRJNA216616	216616	Terrabacteria group	Firmicutes	2.88625	32.7	-	JBDG01	73	3063	2935	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325569	GCA_000528175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/175/GCA_000528175.1_Stap_aure_M0668_V1	-	M0668
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20090884	1412463	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007421.2/CP007421.2	-	1	4707	4450	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384184	GCA_000626135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/135/GCA_000626135.2_ASM62613v2	24786953	EC20090884
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.7286	30.3	-	CUSW01	22	1813	1659	3/31/15	3/18/17	Contig	SC	SAMEA1401441	GCA_001236125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/125/GCA_001236125.1_7213_3_14	-	OXC6557
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.92213	37.9	-	LHSA01	52	2955	2848	8/6/15	2/28/17	Contig	FDA/CFSAN	SAMN02991390	GCA_001257635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/635/GCA_001257635.1_CFSAN023504_01.0	-	MOD1_LS1005
Mycobacterium tuberculosis M1008	1448618	PRJNA235629	235629	Terrabacteria group	Actinobacteria	4.43626	65.5	-	JKPW01	16	4288	4093	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598964	GCA_000654395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/395/GCA_000654395.1_Myco_tube_M1008_V1	-	M1008
Escherichia coli 95.0941	869674	PRJNA51095	51095	Proteobacteria	Gammaproteobacteria	4.79272	50.9	-	AEZN01	36	4891	4495	3/28/11	2/22/17	Scaffold	E. coli Reference Center	SAMN02436472	GCA_000194255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/255/GCA_000194255.1_ASM19425v1	-	95.0941
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.00797	39.6	-	CMNY01	49	2195	2012	3/23/15	3/11/17	Contig	SC	SAMEA2061468	GCA_001095085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/085/GCA_001095085.1_9803_7_2	-	35F
Helicobacter pylori	210	PRJNA286153	286153	Proteobacteria	delta/epsilon subdivisions	1.602	39	-	LELJ01	20	1589	1425	7/9/15	3/26/17	Contig	University of Malaya-University of Western Australia	SAMN03765649	GCA_001051495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/495/GCA_001051495.1_ASM105149v1	-	UM045
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12282	51.7	-	FETU01	87	2488	2157	2/9/16	3/19/17	Scaffold	SC	SAMEA2673771	GCA_900017935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/935/GCA_900017935.1_14355_6_1	-	2842STDY5881150
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.19364	66.6	-	JUAJ01	61	5869	5688	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105396	GCA_000796925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/925/GCA_000796925.1_AZPAE12153	25367914	AZPAE12153
Acinetobacter baumannii 929679-2095	1310589	PRJNA194665	194665	Proteobacteria	Gammaproteobacteria	4.16692	39.3	-	JEZW01	298	4183	3843	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02371053	GCA_000581375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/375/GCA_000581375.1_ASM58137v1	-	929679-2095
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.18145	35.3	-	CPYV01	15	2248	2133	3/23/15	3/17/17	Contig	SC	SAMEA1031470	GCA_001146845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/845/GCA_001146845.1_6630_8_11	-	CZ-NI-016
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04384	41.2	-	FIPI01	22	2050	1936	2/10/16	3/19/17	Contig	SC	SAMEA1566013	GCA_900053625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/625/GCA_900053625.1_8525_5_20	-	SS14
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.3789	38.2	-	CCZE01	32	3082	2932	10/21/14	3/25/17	Scaffold	ROSLIN	SAMEA2627146	GCA_000823385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/385/GCA_000823385.1_12_4054	-	12_4054
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.79312	50.7	-	CXKD01	386	5447	4642	7/16/15	2/24/17	Scaffold	SC	SAMEA2003914	GCA_001254375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/375/GCA_001254375.1_8290_4_37	-	99382
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.37527	67.9	-	LXCX01	187	7679	7049	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208775	GCA_001980485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/485/GCA_001980485.1_ASM198048v1	-	MSHR4750
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.03601	47.5	-	MWHW01	111	3831	3684	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263845	GCA_002098995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/098/995/GCA_002098995.1_ASM209899v1	28219321	CISM_0018
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.29872	29.2	-	FAKE01	1955	3860	3640	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664348	GCA_900008585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/585/GCA_900008585.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.0994	45.3	-	LHAZ01	72	4899	4706	7/28/16	4/17/17	Contig	FDA/CFSAN	SAMN03941065	GCA_001696015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/015/GCA_001696015.1_ASM169601v1	28330888	CFSAN018757
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.86602	56.9	-	LEYZ01	5	5979	5684	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280355	GCA_001032975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/975/GCA_001032975.1_Kleb_pneu_CHS214_V1	-	CHS214
Enterococcus faecalis	1351	PRJNA268957	268957	Terrabacteria group	Firmicutes	2.89672	37.4	-	JTKT01	57	2926	2795	12/2/14	3/25/17	Scaffold	University of Copenhagen	SAMN03200202	GCA_000788155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/155/GCA_000788155.1_ASM78815v1	-	12
Enterococcus faecium	1352	PRJEB13267	325766	Terrabacteria group	Firmicutes	2.88014	37.7	-	FKLG01	157	3022	2772	6/15/16	3/28/17	Contig	UNIVERSITY OF WARWICK	SAMEA3935366	GCA_900080055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/055/GCA_900080055.1_Isolate_18	-	-
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.68156	67.5	-	CSMX01	1041	3773	2933	3/23/15	3/26/17	Scaffold	SC	SAMEA751168	GCA_001211905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/905/GCA_001211905.1_5601_3_10	-	B333
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66052	31.4	-	FAYI01	21	1727	1620	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683021	GCA_001493455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/455/GCA_001493455.1_EC5479	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.78594	55.3	-	FKEX01	30	4756	4525	4/6/16	3/28/17	Scaffold	SC	SAMEA2273191	GCA_900077365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/365/GCA_900077365.1_12045_4_63	-	e571
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.0329	64.1	-	FSMZ01	17	5010	4883	12/14/16	3/21/17	Contig	SC	SAMEA2070591	GCA_900139375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/375/GCA_900139375.1_10625_4_15	-	15
Pseudomonas sp. LAIL14HWK12:I11	1265481	PRJEB20441	382926	Proteobacteria	Gammaproteobacteria	6.1	62.4	-	FWZY01	33	5522	5333	4/19/17	4/22/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745962	GCA_900177505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/505/GCA_900177505.1_IMG-taxon_2545555812_annotated_assembly	-	LAIL14HWK12:I11
Streptomyces sp. NRRL F-6602	1609099	PRJNA238534	238534	Terrabacteria group	Actinobacteria	11.2635	72.2	-	LGKH01	5357	12452	11843	9/18/15	9/18/15	Contig	University of Illinois	SAMN03327490	GCA_001294325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/325/GCA_001294325.1_ASM129432v1	-	NRRL F-6602
Streptomyces sp. NRRL WC-3753	1609104	PRJNA238534	238534	Terrabacteria group	Actinobacteria	9.62889	72	-	LGKF01	2289	9779	9466	9/18/15	9/18/15	Contig	University of Illinois	SAMN03327498	GCA_001294395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/395/GCA_001294395.1_ASM129439v1	-	NRRL WC-3753
Pseudomonas sp. URMO17WK12:I5	1305834	PRJEB20442	382927	Proteobacteria	Gammaproteobacteria	5.75939	62.8	-	FXAD01	49	5359	5144	4/19/17	4/22/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745903	GCA_900177525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/525/GCA_900177525.1_IMG-taxon_2545555815_annotated_assembly	-	URMO17WK12:I5
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18524	64.1	-	FSNA01	26	5212	5065	12/14/16	3/21/17	Contig	SC	SAMEA2071136	GCA_900139395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/395/GCA_900139395.1_10625_4_16	-	16
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.76213	55.4	-	FKFA01	34	4666	4462	4/6/16	3/28/17	Scaffold	SC	SAMEA2273192	GCA_900077375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/375/GCA_900077375.1_12045_4_64	-	e572
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.57811	31.6	-	FBNP01	14	1586	1523	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683433	GCA_001493475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/475/GCA_001493475.1_H074080511	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.72472	67.6	-	CSND01	817	3768	3052	3/23/15	3/26/17	Scaffold	SC	SAMEA751491	GCA_001211945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/945/GCA_001211945.1_5515_6_10	-	B133
Enterococcus faecium	1352	PRJEB13267	325766	Terrabacteria group	Firmicutes	3.01735	37.6	-	FKLI01	185	3195	2913	6/15/16	3/28/17	Contig	UNIVERSITY OF WARWICK	SAMEA3935375	GCA_900080065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/065/GCA_900080065.1_Isolate_30	-	-
Enterococcus faecalis	1351	PRJNA267759	267759	Terrabacteria group	Firmicutes	2.96923	37.3	-	JTKW01	34	3036	2882	12/2/14	3/25/17	Scaffold	University of Copenhagen	SAMN03200205	GCA_000788165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/165/GCA_000788165.1_ASM78816v1	-	19
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.87063	56.9	-	LEZA01	7	5942	5668	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280356	GCA_001033005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/005/GCA_001033005.1_Kleb_pneu_CHS215_V1	-	CHS215
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.36055	45.1	-	LHBA01	64	5145	4945	7/28/16	4/17/17	Contig	FDA/CFSAN	SAMN03941066	GCA_001696055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/055/GCA_001696055.1_ASM169605v1	28330888	CFSAN018758
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.35335	29.3	-	FAKX01	1580	3947	3714	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664366	GCA_900008595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/595/GCA_900008595.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.03656	47.5	-	MWHX01	107	3836	3688	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263844	GCA_002099015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/015/GCA_002099015.1_ASM209901v1	28219321	CISM_0017
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.17552	68.2	-	LXCY01	173	7425	6801	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208776	GCA_001980495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/495/GCA_001980495.1_ASM198049v1	-	MSHR1141
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.74684	50.7	-	CWVC01	389	5294	4567	7/16/15	2/24/17	Scaffold	SC	SAMEA3345069	GCA_001254475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/475/GCA_001254475.1_Sg_201400046_ACAGTG_L001	-	201400046_1
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.38673	38.2	-	CCZF01	35	3083	2933	10/21/14	3/25/17	Scaffold	ROSLIN	SAMEA2627147	GCA_000823405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/405/GCA_000823405.1_12_4058	-	12_4058
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05801	41.1	-	FIPZ01	19	2070	1962	2/10/16	3/19/17	Contig	SC	SAMEA1566099	GCA_900053635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/635/GCA_900053635.1_8525_5_38	-	SS33
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	1.93977	35.2	-	CPZB01	12	1988	1880	3/23/15	3/17/17	Contig	SC	SAMEA1031516	GCA_001147785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/785/GCA_001147785.1_6753_5_5	-	B42VD
Acinetobacter baumannii 58452	1310579	PRJNA194655	194655	Proteobacteria	Gammaproteobacteria	4.10008	38.9	-	JEZV01	107	4075	3744	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02371048	GCA_000581395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/395/GCA_000581395.1_ASM58139v1	-	58452
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.29935	66.4	-	JUAI01	155	5983	5743	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105397	GCA_000796945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/945/GCA_000796945.1_AZPAE12154	25367914	AZPAE12154
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16181	51.5	-	FFAZ01	91	2518	2145	2/9/16	3/21/17	Scaffold	SC	SAMEA2674278	GCA_900017945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/945/GCA_900017945.1_14555_5_69	-	2842STDY5881410
Helicobacter pylori	210	PRJNA286979	286979	Proteobacteria	delta/epsilon subdivisions	1.61754	38.9	-	LFCA01	20	1620	1451	7/22/15	3/26/17	Contig	University of Malaya-University of Western Australia	SAMN03774873	GCA_001185015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/015/GCA_001185015.1_ASM118501v1	-	UM139
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08171	39.5	-	COEF02	152	2243	2025	3/22/15	3/11/17	Contig	SC	SAMEA1463174	GCA_001095105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/105/GCA_001095105.2_7622_4_42	-	MD5007
Escherichia coli AA86	1004153	PRJNA65321	65321	Proteobacteria	Gammaproteobacteria	4.98329	50.7104	plasmid pAA86S:NZ_AFET01000005.1/AFET01000005.1	AFET01	5	5105	4824	4/28/11	2/22/17	Scaffold	Seoul National University	SAMN02470896	GCA_000211395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/211/395/GCA_000211395.2_ASM21139v1	21602332	AA86
Mycobacterium tuberculosis M1009	1448619	PRJNA235630	235630	Terrabacteria group	Actinobacteria	4.4175	65.6	-	JKPV01	8	4283	4103	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598965	GCA_000654415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/415/GCA_000654415.1_Myco_tube_M1009_V1	-	M1009
Listeria monocytogenes CFSAN002349	1299895	PRJNA192166	192166	Terrabacteria group	Firmicutes	2.90518	37.9	-	LHRX01	39	2923	2725	8/6/15	2/28/17	Contig	FDA	SAMN01939119	GCA_001257675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/675/GCA_001257675.1_CFSAN002349_01.0	-	CFSAN002349
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.72602	30.4	-	CUUY01	23	1832	1737	3/31/15	3/18/17	Contig	SC	SAMEA1401387	GCA_001236165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/165/GCA_001236165.1_7213_3_69	-	OXC6613
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20090531	1412462	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68583	52.2	chromosome:NZ_CP007422.2/CP007422.2	-	1	4709	4452	4/1/14	3/1/17	Chromosome	LFZ	SAMN02384183	GCA_000626155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/155/GCA_000626155.2_ASM62615v2	24786953	EC20090531
Staphylococcus aureus M0669	1388446	PRJNA216617	216617	Terrabacteria group	Firmicutes	2.81903	32.7	-	JBDF01	35	2960	2797	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325570	GCA_000528195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/195/GCA_000528195.1_Stap_aure_M0669_V1	-	M0669
Staphylococcus aureus M0670	1388447	PRJNA216618	216618	Terrabacteria group	Firmicutes	2.80991	32.8	-	JBDE01	27	2950	2789	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325571	GCA_000528215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/215/GCA_000528215.1_Stap_aure_M0670_V1	-	M0670
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120009	1412471	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007438.1/CP007438.2	-	1	4709	4454	4/2/14	3/2/17	Chromosome	LFZ	SAMN02384192	GCA_000626395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/395/GCA_000626395.2_ASM62639v2	24786953	EC20120009
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.73123	30.3	-	CUSS01	24	1820	1683	3/31/15	3/18/17	Contig	SC	SAMEA1401335	GCA_001236205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/205/GCA_001236205.1_7213_3_1	-	OXC6544
Listeria monocytogenes	1639	PRJNA288585	288585	Terrabacteria group	Firmicutes	2.91421	37.9	-	LFVS02	23	2956	2851	8/21/15	2/28/17	Contig	California Department of Public Health	SAMN03801385	GCA_001273505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/505/GCA_001273505.2_ASM127350v2	-	CDPHFDLB-F14M01297-C2
Mycobacterium tuberculosis M1010	1448620	PRJNA235631	235631	Terrabacteria group	Actinobacteria	4.43685	65.5	-	JKPU01	4	4286	4095	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598966	GCA_000654435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/435/GCA_000654435.1_Myco_tube_M1010_V1	-	M1010
Escherichia coli H30	869673	PRJNA51093	51093	Proteobacteria	Gammaproteobacteria	5.52636	50.3	-	AEZM01	19	5889	5317	5/25/11	2/22/17	Scaffold	E. coli Reference Center	SAMN00031755	GCA_000215165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/165/GCA_000215165.1_ASM21516v1	-	H30
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.28679	39.6	-	CLYA01	85	2510	2269	3/21/15	3/11/17	Contig	SC	SAMEA1028720	GCA_001095265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/265/GCA_001095265.1_6983_6_41	-	SMRU2345
Helicobacter pylori	210	PRJNA286973	286973	Proteobacteria	delta/epsilon subdivisions	1.59207	38.8	-	LFBY01	18	1591	1437	7/22/15	3/26/17	Contig	University of Malaya-University of Western Australia	SAMN03774845	GCA_001185025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/025/GCA_001185025.1_ASM118502v1	-	UM119
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16354	51.5	-	FESN01	76	2515	2140	2/9/16	3/21/17	Scaffold	SC	SAMEA2673826	GCA_900019005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/005/GCA_900019005.1_14355_5_19	-	2842STDY5881072
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.73227	66.2	-	JUAH01	138	6558	6305	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105398	GCA_000796955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/955/GCA_000796955.1_AZPAE12155	25367914	AZPAE12155
Acinetobacter baumannii 796380-2102	1310593	PRJNA194669	194669	Proteobacteria	Gammaproteobacteria	4.21143	39.1	-	JEZT01	196	4282	3935	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02371052	GCA_000581415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/415/GCA_000581415.1_ASM58141v1	-	796380-2102
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.13854	35.6	-	CQDY01	33	2215	2102	3/23/15	3/17/17	Contig	SC	SAMEA1031518	GCA_001149385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/385/GCA_001149385.1_6753_5_21	-	RBH11
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.03855	41.2	-	FIMZ01	22	2042	1927	2/10/16	3/19/17	Contig	SC	SAMEA1566187	GCA_900053795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/795/GCA_900053795.1_8337_6_25	-	BM321C
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.40189	38.2	-	CCZG01	51	3103	2911	10/21/14	3/25/17	Scaffold	ROSLIN	SAMEA2627148	GCA_000823425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/425/GCA_000823425.1_12_4117	-	12_4117
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.37097	50.8	-	CXAV01	414	4626	4152	7/17/15	2/24/17	Scaffold	SC	SAMEA954634	GCA_001254495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/495/GCA_001254495.1_5008_7_6	-	Sh65387_401059
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.1295	68.2	-	LXCZ01	287	7398	6785	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208777	GCA_001980515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/515/GCA_001980515.1_ASM198051v1	-	DW10
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.03277	47.5	-	MWHY01	101	3845	3689	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263843	GCA_002099035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/035/GCA_002099035.1_ASM209903v1	28219321	CISM_0016
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.1607	29	-	FALK01	1092	3869	3510	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664381	GCA_900008605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/605/GCA_900008605.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.28476	45.1	-	LHBD01	37	5091	4874	7/28/16	4/17/17	Contig	FDA/CFSAN	SAMN03941069	GCA_001696065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/065/GCA_001696065.1_ASM169606v1	28330888	CFSAN018761
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.87336	56.9	-	LEZB01	9	5916	5649	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280357	GCA_001033015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/015/GCA_001033015.1_Kleb_pneu_CHS216_V1	-	CHS216
Enterococcus faecalis	1351	PRJNA267758	267758	Terrabacteria group	Firmicutes	2.76281	37.6	-	JTKS01	24	2767	2647	12/2/14	3/25/17	Scaffold	University of Copenhagen	SAMN03200200	GCA_000788175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/175/GCA_000788175.1_ASM78817v1	-	1
Enterococcus faecium	1352	PRJEB13267	325766	Terrabacteria group	Firmicutes	3.00303	37.9	-	FKLC01	162	3165	2913	6/15/16	3/28/17	Contig	UNIVERSITY OF WARWICK	SAMEA3935365	GCA_900080075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/075/GCA_900080075.1_Isolate_17	-	-
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.80531	67.9	-	CSPP01	402	3710	3258	3/22/15	3/26/17	Scaffold	SC	SAMEA751466	GCA_001211985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/985/GCA_001211985.1_5476_8_9	-	B284
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.63967	31.4	-	FBNN01	17	1690	1605	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683452	GCA_001493495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/495/GCA_001493495.1_H083960630	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.89192	54.9	-	FKFD01	59	4812	4559	4/6/16	3/28/17	Scaffold	SC	SAMEA2273494	GCA_900077385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/385/GCA_900077385.1_12045_5_69	-	e575
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.02448	64.2	-	FVUB01	15	5010	4911	3/10/17	3/18/17	Contig	SC	SAMEA2070592	GCA_900139415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/415/GCA_900139415.1_10625_4_18	-	18
Pseudomonas sp. Irchel s3b6	2009078	PRJEB21289	398218	Proteobacteria	Gammaproteobacteria	5.38392	60.4	-	FYDM01	40	5007	4797	8/15/17	8/28/17	Scaffold	UNIVERSITY OF ZUERICH	SAMEA104128665	GCA_900187415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/415/GCA_900187415.1_s3b6	-	-
Streptomyces sp. JCM 18897	1300154	PRJDB905	245947	Terrabacteria group	Actinobacteria	1.51097	67.9	-	BBEY01	1616	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016821	GCA_001312965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/965/GCA_001312965.1_ASM131296v1	-	JCM 18897
Streptomyces sp. JCM 17819	1302248	PRJDB922	245952	Terrabacteria group	Actinobacteria	1.93773	68.4	-	BBFI01	1880	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016943	GCA_001313165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/313/165/GCA_001313165.1_ASM131316v1	-	JCM 17819
Pseudomonas sp. Irchel s3h14	2009179	PRJEB21289	398218	Proteobacteria	Gammaproteobacteria	6.71575	58.9	-	FYDJ01	46	6297	6042	8/15/17	8/28/17	Scaffold	UNIVERSITY OF ZUERICH	SAMEA104128671	GCA_900187425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/425/GCA_900187425.1_s3h14	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.25817	64.1	-	FSND01	19	5325	5208	12/14/16	3/21/17	Contig	SC	SAMEA2070154	GCA_900139425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/425/GCA_900139425.1_10625_4_8	-	8
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.82967	55.1	-	FKFB01	36	4833	4561	4/6/16	3/28/17	Scaffold	SC	SAMEA2273194	GCA_900077395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/395/GCA_900077395.1_12045_4_66	-	e590
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.81739	31.1	-	FBBS01	90	1888	1758	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683107	GCA_001493515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/515/GCA_001493515.1_W17B	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.7031	67.6	-	CSQT01	1066	3777	2962	3/22/15	3/26/17	Scaffold	SC	SAMEA751514	GCA_001212045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/045/GCA_001212045.1_5476_6_4	-	B024
Enterococcus faecium	1352	PRJEB13267	325766	Terrabacteria group	Firmicutes	3.02081	37.7	-	FKLK01	216	3205	2925	6/15/16	3/28/17	Contig	UNIVERSITY OF WARWICK	SAMEA3935369	GCA_900080085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/085/GCA_900080085.1_Isolate_21	-	-
Enterococcus faecalis	1351	PRJNA268240	268240	Terrabacteria group	Firmicutes	2.78667	37.5	-	JTKU01	20	2776	2664	12/2/14	3/25/17	Scaffold	Enterococcus faecalis 17	SAMN03200203	GCA_000788185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/185/GCA_000788185.1_ASM78818v1	-	17
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.88693	56.9	-	LEZC01	12	5992	5699	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280358	GCA_001033045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/045/GCA_001033045.1_Kleb_pneu_CHS217_V1	-	CHS217
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	4.98644	45.3	-	LHBC01	61	4771	4548	7/28/16	4/17/17	Contig	FDA/CFSAN	SAMN03941068	GCA_001696085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/085/GCA_001696085.1_ASM169608v1	28330888	CFSAN018760
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.02664	28.7	-	FAMS01	1131	3626	3406	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664414	GCA_900008615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/615/GCA_900008615.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.03865	47.5	-	MWHZ01	103	3863	3692	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263842	GCA_002099055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/055/GCA_002099055.1_ASM209905v1	28219321	CISM_0015
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.1193	68.2	-	LXDA01	226	7382	6780	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208778	GCA_001980545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/545/GCA_001980545.1_ASM198054v1	-	DW7
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.74937	50.6	-	CWST01	377	5423	4567	7/16/15	2/24/17	Scaffold	SC	SAMEA3345012	GCA_001254515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/515/GCA_001254515.1_H14050007401	-	07401ss_1
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.34652	38.2	-	CCZH01	26	3035	2859	10/21/14	3/25/17	Scaffold	ROSLIN	SAMEA2627149	GCA_000823445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/445/GCA_000823445.1_12_4169	-	12_4169
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.07749	41.2	-	FISZ01	22	2098	1989	2/10/16	3/19/17	Contig	SC	SAMEA1566205	GCA_900053805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/805/GCA_900053805.1_8525_5_6	-	FX336_2
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	1.98931	35.2	-	CQAD01	12	2038	1921	3/22/15	3/17/17	Contig	SC	SAMEA1031478	GCA_001151005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/005/GCA_001151005.1_6753_5_19	-	RBH08
Acinetobacter baumannii 781407	1310599	PRJNA194675	194675	Proteobacteria	Gammaproteobacteria	4.07186	39.2	-	JEZS01	72	3912	3694	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02371051	GCA_000581435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/435/GCA_000581435.1_ASM58143v1	-	781407
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.57173	66.1	-	JUAG01	199	6369	6060	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105399	GCA_000796985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/985/GCA_000796985.1_AZPAE12156	25367914	AZPAE12156
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16655	51.6	-	FEWC01	73	2492	2159	2/9/16	3/19/17	Scaffold	SC	SAMEA2674130	GCA_900019015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/015/GCA_900019015.1_14324_4_63	-	2842STDY5881308
Helicobacter pylori	210	PRJNA286980	286980	Proteobacteria	delta/epsilon subdivisions	1.63471	38.9	-	LFCB01	27	1638	1451	7/22/15	3/26/17	Contig	University of Malaya-University of Western Australia	SAMN03774876	GCA_001185035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/035/GCA_001185035.1_ASM118503v1	-	UM158
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.06964	39.7	-	CPMH01	80	2253	2079	3/23/15	3/11/17	Contig	SC	SAMEA682514	GCA_001095285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/285/GCA_001095285.1_5366_3_1	-	08B02909
Escherichia coli O104:H4 str. H112180280	1042804	PRJNA67929	67929	Proteobacteria	Gammaproteobacteria	5.38452	50.6	-	AFPN02	3	5702	5304	6/10/11	2/22/17	Scaffold	"Health Protection Agency (HPA, London, UK)"	SAMN00765209	GCA_000217975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/975/GCA_000217975.2_ASM21797v2	-	H112180280
Mycobacterium tuberculosis M1012	1448621	PRJNA235632	235632	Terrabacteria group	Actinobacteria	4.43419	65.5	-	JKPT01	4	4271	4097	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598967	GCA_000654455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/455/GCA_000654455.1_Myco_tube_M1012_V1	-	M1012
Listeria monocytogenes	1639	PRJNA288585	288585	Terrabacteria group	Firmicutes	2.9149	37.9	-	LFVT02	23	2951	2849	8/21/15	2/28/17	Contig	California Department of Public Health	SAMN03801386	GCA_001273535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/273/535/GCA_001273535.2_ASM127353v2	-	CDPHFDLB-F14M01297-C4
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70636	30.4	-	CURL01	17	1806	1672	3/31/15	3/18/17	Contig	SC	SAMEA1010610	GCA_001236305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/305/GCA_001236305.1_7092_1_70	-	OXC6517
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120929	1412618	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68574	52.1	chromosome:NZ_CP007463.2/CP007463.2	-	1	4716	4387	4/2/14	3/2/17	Chromosome	LFZ	SAMN02384339	GCA_000626415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/415/GCA_000626415.2_ASM62641v2	24786953	EC20120929
Staphylococcus aureus M0671	1388448	PRJNA216619	216619	Terrabacteria group	Firmicutes	2.90791	32.7	-	JBDD01	75	3099	2942	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325572	GCA_000528235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/235/GCA_000528235.1_Stap_aure_M0671_V1	-	M0671
Staphylococcus aureus M0672	1388449	PRJNA216620	216620	Terrabacteria group	Firmicutes	2.88868	32.8	-	JBDC01	56	3081	2909	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325573	GCA_000528255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/255/GCA_000528255.1_Stap_aure_M0672_V1	-	M0672
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20121747	1412562	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68573	52.2	chromosome:NZ_CP007464.2/CP007464.2	-	1	4713	4422	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384283	GCA_000626435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/435/GCA_000626435.2_ASM62643v2	24786953	EC20121747
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.65465	30.4	-	CUIF01	20	1713	1598	3/31/15	3/18/17	Contig	SC	SAMEA1010329	GCA_001236325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/325/GCA_001236325.1_7038_3_24	-	OXC6273
Listeria monocytogenes	1639	PRJNA261392	261392	Terrabacteria group	Firmicutes	2.9838	38	-	LJAR01	4	3034	2912	9/8/15	2/28/17	Contig	IZSAM	SAMN04009958	GCA_001280245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/245/GCA_001280245.1_ASM128024v1	-	IZSAM_Lm_14-16064
Mycobacterium tuberculosis M1011	1448622	PRJNA235633	235633	Terrabacteria group	Actinobacteria	4.44213	65.6	-	JKPS01	76	4349	4127	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598968	GCA_000654475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/475/GCA_000654475.1_Myco_tube_M1011_V1	-	M1011
Escherichia coli O104:H4 str. TY-2482	1038844	PRJNA67657	67657	Proteobacteria	Gammaproteobacteria	5.44038	50.5	-	AFVR01	99	5775	5276	7/27/11	2/22/17	Scaffold	BGI	SAMN02471605	GCA_000221885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/885/GCA_000221885.1_E.coli_0104_H4_Illumina_1.0	21793736	TY-2482
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.13174	39.5	-	CMMT01	68	2366	2112	3/23/15	3/11/17	Contig	SC	SAMEA1029353	GCA_001095365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/365/GCA_001095365.1_7068_4_24	-	SMRU3144
Helicobacter pylori	210	PRJNA286975	286975	Proteobacteria	delta/epsilon subdivisions	1.59753	39.2	-	LFBZ01	16	1588	1423	7/22/15	3/26/17	Contig	University of Malaya-University of Western Australia	SAMN03774847	GCA_001185045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/045/GCA_001185045.1_ASM118504v1	-	UM131
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.10602	51.8	-	FEQY01	68	2452	2118	2/9/16	3/19/17	Scaffold	SC	SAMEA2673832	GCA_900019895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/895/GCA_900019895.1_14355_4_21	-	2842STDY5880978
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.75858	66	-	JUAF01	158	6424	6156	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105400	GCA_000797005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/005/GCA_000797005.1_AZPAE12409	25367914	AZPAE12409
Acinetobacter baumannii 564012	1310560	PRJNA194636	194636	Proteobacteria	Gammaproteobacteria	4.12765	39.1	-	JEZQ01	120	4126	3858	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02371047	GCA_000581455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/455/GCA_000581455.1_ASM58145v1	-	564012
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.05516	35.3	-	CQCM01	14	2123	2010	3/22/15	3/17/17	Contig	SC	SAMEA1031456	GCA_001156965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/965/GCA_001156965.1_6753_5_1	-	B09PS
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.04392	41.1	-	FIJI01	25	2046	1952	2/10/16	3/19/17	Contig	SC	SAMEA1316700	GCA_900054105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/105/GCA_900054105.1_7054_7_23	-	SS1011
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.37944	38.2	-	CCZI01	32	3077	2921	10/21/14	3/25/17	Scaffold	ROSLIN	SAMEA2627150	GCA_000823465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/465/GCA_000823465.1_12_4240	-	12_4240
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.74151	50.8	-	CXIT01	388	5370	4562	7/17/15	2/24/17	Scaffold	SC	SAMEA2003896	GCA_001254555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/555/GCA_001254555.1_8289_7_79	-	86255
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.12899	68.2	-	LXDB01	121	7389	6816	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208779	GCA_001980565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/565/GCA_001980565.1_ASM198056v1	-	NAU33A-4
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.03272	47.5	-	MWIA01	118	3799	3677	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263841	GCA_002099065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/065/GCA_002099065.1_ASM209906v1	28219321	CISM_0014
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.33314	29.2	-	FAMT01	1856	3885	3646	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664415	GCA_900008625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/625/GCA_900008625.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.14844	45.2	-	LHBB01	88	4940	4707	7/28/16	4/17/17	Contig	FDA/CFSAN	SAMN03941067	GCA_001696115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/115/GCA_001696115.1_ASM169611v1	28330888	CFSAN001174
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.86558	56.9	-	LEZD01	8	5932	5657	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280359	GCA_001033055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/055/GCA_001033055.1_Kleb_pneu_CHS218_V1	-	CHS218
Enterococcus faecalis	1351	PRJNA268137	268137	Terrabacteria group	Firmicutes	2.88866	37.4	-	JTKV01	103	2925	2807	12/2/14	3/25/17	Scaffold	University of Copenhagen	SAMN03200204	GCA_000788235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/235/GCA_000788235.1_ASM78823v1	-	18
Enterococcus faecium	1352	PRJEB13267	325766	Terrabacteria group	Firmicutes	3.38425	37.5	-	FKLM01	320	3656	3313	6/15/16	3/28/17	Contig	UNIVERSITY OF WARWICK	SAMEA3935370	GCA_900080095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/095/GCA_900080095.1_Isolate_22	-	-
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.72758	67.6	-	CSSD01	725	3752	3064	3/23/15	3/26/17	Scaffold	SC	SAMEA751161	GCA_001212285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/285/GCA_001212285.1_5515_8_5	-	B093
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.70532	31.3	-	FBOW01	32	1777	1685	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683440	GCA_001493555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/555/GCA_001493555.1_H121060205	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.61152	55.6	-	FKFC01	19	4446	4274	4/6/16	3/28/17	Scaffold	SC	SAMEA2273195	GCA_900077405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/405/GCA_900077405.1_12045_4_67	-	e592
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.87466	64.2	-	FVUG01	5	4841	4725	3/10/17	3/18/17	Contig	SC	SAMEA2071201	GCA_900139435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/435/GCA_900139435.1_10625_4_85	-	85
Pseudomonas sp. Irchel s3b5	2009077	PRJEB21289	398218	Proteobacteria	Gammaproteobacteria	5.95565	58.9	-	FYDY01	69	5551	5266	8/15/17	8/28/17	Scaffold	UNIVERSITY OF ZUERICH	SAMEA104128664	GCA_900187435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/435/GCA_900187435.1_s3b5	-	-
Streptomyces sp. Termitarium-T10T-6	1839775	PRJEB14573	326630	Terrabacteria group	Actinobacteria	7.75762	71.5	-	FMCO01	837	7757	7689	8/12/16	8/12/16	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04883157	GCA_900091795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/795/GCA_900091795.1_IMG-taxon_2657245720_annotated_assembly	-	Termitarium-T10T-6
Streptomyces sp. IgraMP-1	1839767	PRJEB14557	326644	Terrabacteria group	Actinobacteria	6.91535	73.2	-	FMCM01	558	6552	6452	8/12/16	8/12/16	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04883144	GCA_900091895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/895/GCA_900091895.1_IMG-taxon_2657245703_annotated_assembly	-	IgraMP-1
Pseudomonas sp. Irchel s3b2	2009073	PRJEB21289	398218	Proteobacteria	Gammaproteobacteria	6.21871	58.7	-	FYEB01	29	5760	5509	8/15/17	8/28/17	Scaffold	UNIVERSITY OF ZUERICH	SAMEA104128666	GCA_900187445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/445/GCA_900187445.1_s3b2	-	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.981	64.2	-	FVUD01	15	4977	4829	3/10/17	3/18/17	Contig	SC	SAMEA2070588	GCA_900139445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/445/GCA_900139445.1_10625_4_6	-	6
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.30168	54.9	-	FKFG01	74	5249	5005	4/6/16	3/28/17	Scaffold	SC	SAMEA2273196	GCA_900077415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/415/GCA_900077415.1_12045_4_68	-	e597
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	2.00216	31.1	-	FBBJ01	525	2030	1797	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683073	GCA_001493635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/635/GCA_001493635.1_SWAN409	-	n/a
Bordetella pertussis	520	PRJEB2103	203747	Proteobacteria	Betaproteobacteria	3.73488	67.7	-	CSNR01	925	3761	3054	3/23/15	3/26/17	Scaffold	SC	SAMEA751386	GCA_001212485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/485/GCA_001212485.1_4846_7_2	-	B227
Enterococcus faecium	1352	PRJEB13267	325766	Terrabacteria group	Firmicutes	2.97284	37.9	-	FKLH01	189	3153	2877	6/15/16	3/28/17	Contig	UNIVERSITY OF WARWICK	SAMEA3935364	GCA_900080105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/105/GCA_900080105.1_Isolate_12	-	-
Enterococcus faecalis	1351	PRJNA268241	268241	Terrabacteria group	Firmicutes	3.03771	37.2	-	JTKX01	89	3088	2911	12/2/14	3/25/17	Scaffold	Enterococcus faecalis 32	SAMN03200206	GCA_000788255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/255/GCA_000788255.1_ASM78825v1	-	32
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.87711	56.9	-	LEZE01	4	5941	5656	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280360	GCA_001033085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/085/GCA_001033085.1_Kleb_pneu_CHS219_V1	-	CHS219
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.3097	45.2	-	LHBE01	505	5119	4809	7/28/16	4/17/17	Contig	FDA/CFSAN	SAMN03941070	GCA_001696155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/155/GCA_001696155.1_ASM169615v1	28330888	CFSAN018762
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.11321	28.5	-	FAMV01	323	3833	3723	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664419	GCA_900008635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/635/GCA_900008635.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.15775	47.6	-	MWIB01	120	3974	3836	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263840	GCA_002099095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/095/GCA_002099095.1_ASM209909v1	28219321	CISM_0010
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.9162	68.3	-	LXDD01	146	7178	6544	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208781	GCA_001980585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/585/GCA_001980585.1_ASM198058v1	-	MSHR5089
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.56707	50.8	-	CXHK01	408	5099	4376	7/16/15	2/24/17	Scaffold	SC	SAMEA2003845	GCA_001254595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/595/GCA_001254595.1_8289_7_37	-	75643
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.43398	38.3	-	CDDT01	47	3135	2974	11/4/14	3/25/17	Scaffold	ROSLIN	SAMEA2627151	GCA_000823485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/485/GCA_000823485.1_12_4251	-	12_4251
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.03314	41.1	-	FIMX01	22	2039	1924	2/10/16	3/19/17	Contig	SC	SAMEA1566110	GCA_900054115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/115/GCA_900054115.1_8337_6_21	-	BM278a
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	1.98907	35.1	-	CPZY01	26	2033	1906	3/23/15	3/17/17	Contig	SC	SAMEA1031439	GCA_001166605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/605/GCA_001166605.1_6753_5_2	-	B15VD
Acinetobacter baumannii 562700	1310588	PRJNA194664	194664	Proteobacteria	Gammaproteobacteria	3.96756	39	-	JEZP01	64	3842	3601	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02371046	GCA_000581475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/475/GCA_000581475.1_ASM58147v1	-	562700
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.85535	66	-	JTWN01	190	6604	6337	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105496	GCA_000797025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/025/GCA_000797025.1_AZPAE14719	25367914	AZPAE14719
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.17084	51.5	-	FETY01	91	2499	2171	2/9/16	3/19/17	Scaffold	SC	SAMEA2673793	GCA_900019905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/905/GCA_900019905.1_14355_6_10	-	2842STDY5881159
Helicobacter pylori	210	PRJNA286972	286972	Proteobacteria	delta/epsilon subdivisions	1.59372	39.1	-	LFBX01	23	1581	1417	7/22/15	3/26/17	Contig	University of Malaya-University of Western Australia	SAMN03774844	GCA_001185095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/095/GCA_001185095.1_ASM118509v1	-	UM122
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08873	39.6	-	COAE02	167	2279	2068	3/22/15	3/11/17	Contig	SC	SAMEA1463109	GCA_001095405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/405/GCA_001095405.2_7553_6_2	-	PT8105
Escherichia coli O104:H4 str. 11-4632 C5	1068621	PRJNA70747	70747	Proteobacteria	Gammaproteobacteria	5.41789	50.6	-	AFVE01	9	5731	5332	10/31/11	2/22/17	Scaffold	Broad Institute	SAMN00715312	GCA_000235045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/045/GCA_000235045.1_Esch_coli_11-4632_C5_V2	22315421	11-4632 C5
Mycobacterium tuberculosis M1017	1448623	PRJNA235634	235634	Terrabacteria group	Actinobacteria	4.41089	65.6	-	JKPR01	90	4337	4104	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598969	GCA_000654495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/495/GCA_000654495.1_Myco_tube_M1017_V1	-	M1017
Listeria monocytogenes	1639	PRJNA292147	292147	Terrabacteria group	Firmicutes	2.96955	37.8	-	LIKV01	35	3027	2928	10/19/15	2/28/17	Contig	University of Copenhagen	SAMN03968471	GCA_001399895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/895/GCA_001399895.1_ASM139989v1	-	LM156
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66624	30.4	-	CURU01	16	1758	1662	3/31/15	3/18/17	Contig	SC	SAMEA1010523	GCA_001236345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/345/GCA_001236345.1_7092_1_77	-	OXC6524
Salmonella enterica subsp. enterica serovar Enteritidis str. SA19940857	1412501	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.70707	52.1	chromosome:NZ_CP007465.1/CP007465.1	-	1	4737	4415	4/2/14	2/26/17	Chromosome	LFZ	SAMN02384222	GCA_000626455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/455/GCA_000626455.1_ASM62645v1	24786953	SA19940857
Staphylococcus aureus M0674	1388450	PRJNA216621	216621	Terrabacteria group	Firmicutes	2.88895	32.8	-	JBDB01	58	3072	2901	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325574	GCA_000528275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/275/GCA_000528275.1_Stap_aure_M0674_V1	-	M0674
Staphylococcus aureus M0677	1388451	PRJNA216622	216622	Terrabacteria group	Firmicutes	2.8623	32.8	-	JBDA01	32	3021	2856	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325575	GCA_000528295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/295/GCA_000528295.1_Stap_aure_M0677_V1	-	M0677
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20084644	1412480	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007466.1/CP007466.2	-	1	4709	4448	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384201	GCA_000626475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/475/GCA_000626475.2_ASM62647v2	24786953	SA20084644
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.71996	30.4	-	CUIP01	28	1856	1753	3/31/15	3/18/17	Contig	SC	SAMEA1010658	GCA_001236385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/385/GCA_001236385.1_7038_3_32	-	OXC6282
Listeria monocytogenes	1639	PRJNA292147	292147	Terrabacteria group	Firmicutes	2.94018	37.9	-	LIKU01	40	2962	2869	10/19/15	2/28/17	Contig	University of Copenhagen	SAMN03968472	GCA_001399905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/905/GCA_001399905.1_ASM139990v1	-	LM83
Mycobacterium tuberculosis M1021	1448624	PRJNA235635	235635	Terrabacteria group	Actinobacteria	4.44137	65.5	-	JKPQ01	8	4282	4092	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598970	GCA_000654515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/515/GCA_000654515.1_Myco_tube_M1021_V1	-	M1021
Escherichia coli O104:H4 str. 11-4632 C4	1068620	PRJNA70745	70745	Proteobacteria	Gammaproteobacteria	5.42459	50.6	-	AFVD01	7	5715	5307	10/31/11	2/22/17	Scaffold	Broad Institute	SAMN00715311	GCA_000235065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/065/GCA_000235065.1_Esch_coli_11-4632_C4_V2	22315421	11-4632 C4
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07516	39.7	-	CNVK02	216	2239	2033	3/23/15	3/5/17	Contig	SC	SAMEA1032596	GCA_001095485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/485/GCA_001095485.2_6999_7_18	-	388483
Helicobacter pylori	210	PRJNA287066	287066	Proteobacteria	delta/epsilon subdivisions	1.67294	38.9	-	LFKE01	62	1702	1507	7/31/15	4/10/17	Contig	University of Malaya-University of Western Australia	SAMN03776042	GCA_001189585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/585/GCA_001189585.1_ASM118958v1	-	UM202
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16861	51.5	-	FEVX01	76	2519	2151	2/9/16	3/21/17	Scaffold	SC	SAMEA2674095	GCA_900019915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/915/GCA_900019915.1_14324_4_43	-	2842STDY5881288
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.45728	66.4	-	JUAE01	118	6214	6015	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105401	GCA_000797045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/045/GCA_000797045.1_AZPAE12410	25367914	AZPAE12410
Acinetobacter baumannii 472237-1196	1310562	PRJNA194638	194638	Proteobacteria	Gammaproteobacteria	4.17159	39.2	-	JEZM01	129	4164	3913	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02371043	GCA_000581495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/495/GCA_000581495.1_ASM58149v1	-	472237-1196
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.18049	35.5	-	CPVY01	36	2257	2147	3/23/15	3/17/17	Contig	SC	SAMEA1031504	GCA_001171645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/645/GCA_001171645.1_6753_5_12	-	RBH01
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	1.99352	41.3	-	FIFC01	25	2018	1925	2/10/16	3/19/17	Contig	SC	SAMEA1316603	GCA_900054295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/295/GCA_900054295.1_5749_1_2	-	LOLA-SS002
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.34065	38.2	-	CCZJ01	31	3034	2868	10/21/14	3/25/17	Scaffold	ROSLIN	SAMEA2627152	GCA_000823505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/505/GCA_000823505.1_12_4437	-	12_4437
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.4946	50.6	-	CXAS01	353	4804	4256	7/16/15	2/24/17	Scaffold	SC	SAMEA954741	GCA_001254615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/615/GCA_001254615.1_5008_7_3	-	Sh60108_401056
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.91474	68.3	-	LXDE01	146	7185	6556	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208782	GCA_001980605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/605/GCA_001980605.1_ASM198060v1	-	MSHR5093
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.03509	47.5	-	MWIC01	94	3839	3685	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263839	GCA_002099115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/115/GCA_002099115.1_ASM209911v1	28219321	CISM_0008
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.15106	28.8	-	FANC01	834	3785	3619	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664425	GCA_900008655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/655/GCA_900008655.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.24516	45.2	-	LHBH01	60	5038	4816	7/28/16	4/17/17	Contig	FDA/CFSAN	SAMN03941073	GCA_001696165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/165/GCA_001696165.1_ASM169616v1	28330888	CFSAN018765
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.92612	56.9	-	LEZF01	13	6012	5736	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280361	GCA_001033095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/095/GCA_001033095.1_Kleb_pneu_CHS220_V1	-	CHS220
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.89236	37.5	-	JWAW01	90	2895	2775	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197116	GCA_001052275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/275/GCA_001052275.1_ASM105227v1	26230489	116_EFLS
Enterococcus faecium	1352	PRJEB13267	325766	Terrabacteria group	Firmicutes	3.15473	37.6	-	FKLL01	342	3387	3060	6/15/16	3/28/17	Contig	UNIVERSITY OF WARWICK	SAMEA3935372	GCA_900080115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/115/GCA_900080115.1_Isolate_24	-	-
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.69892	67.5	-	CSRK01	1132	3757	2957	3/22/15	3/26/17	Scaffold	SC	SAMEA751339	GCA_001212505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/505/GCA_001212505.1_5476_2_4	-	B254
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75079	31.2	-	FBBP01	25	1839	1743	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683102	GCA_001493675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/675/GCA_001493675.1_EC5841	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.01071	54.9	-	FKFE01	70	4943	4680	4/6/16	3/28/17	Scaffold	SC	SAMEA2273492	GCA_900077425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/425/GCA_900077425.1_12045_5_67	-	e595
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.2033	64.2	-	FSNC01	28	5234	5092	12/14/16	3/21/17	Contig	SC	SAMEA2071133	GCA_900139455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/455/GCA_900139455.1_10625_4_7	-	7
Pseudomonas sp. Irchel 3E13	2008975	PRJEB21289	398218	Proteobacteria	Gammaproteobacteria	7.23639	62.7	-	FYDX01	48	6442	6215	8/15/17	8/28/17	Scaffold	UNIVERSITY OF ZUERICH	SAMEA104128678	GCA_900187455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/455/GCA_900187455.1_3E13	-	-
Streptomyces sp. Ncost-T6T-2b	1839773	PRJEB14578	326623	Terrabacteria group	Actinobacteria	6.58042	71.2	-	FMDL01	1874	7501	7444	8/15/16	8/15/16	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04883150	GCA_900091965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/965/GCA_900091965.1_IMG-taxon_2657245722_annotated_assembly	-	Ncost-T6T-2b
Streptomyces sp. WAC00263	1917422	PRJNA353129	353129	Terrabacteria group	Actinobacteria	9.63095	56.4	-	MPHV01	5341	11879	11651	1/30/17	1/30/17	Scaffold	University of Toronto	SAMN06010518	GCA_001974775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/974/775/GCA_001974775.1_ASM197477v1	28075554	WAC00263
Pseudomonas sp. Irchel 3A18	2008905	PRJEB21289	398218	Proteobacteria	Gammaproteobacteria	5.91841	58.2	-	FYDI01	37	5211	5012	8/15/17	8/28/17	Scaffold	UNIVERSITY OF ZUERICH	SAMEA104128674	GCA_900187465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/465/GCA_900187465.1_3A18	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.37864	64.1	-	FSNB01	51	5484	5280	12/14/16	3/21/17	Contig	SC	SAMEA2070153	GCA_900139465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/465/GCA_900139465.1_10625_4_5	-	5
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.24953	54.9	-	FKFF01	65	5181	4930	4/6/16	3/28/17	Scaffold	SC	SAMEA2273491	GCA_900077435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/435/GCA_900077435.1_12082_4_60	-	e598
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.6596	31.4	-	FBDN01	23	1715	1629	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683153	GCA_001493695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/695/GCA_001493695.1_EC3689	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.72722	67.7	-	CSMY01	899	3753	3040	3/23/15	3/26/17	Scaffold	SC	SAMEA751348	GCA_001212525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/525/GCA_001212525.1_5476_3_3	-	B097
Enterococcus faecium	1352	PRJEB19418	376304	Terrabacteria group	Firmicutes	2.79892	38	-	FUWF01	83	2860	2596	2/22/17	5/31/17	Contig	MICALIS	SAMEA95325418	GCA_900166945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/945/GCA_900166945.1_ASM90016694v1	-	AT1E22
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.84673	37.4	-	JVYW01	131	2870	2745	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197168	GCA_001053015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/015/GCA_001053015.1_ASM105301v1	26230489	1206_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.70838	57.1	-	LEZG01	7	5752	5510	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280362	GCA_001033125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/125/GCA_001033125.1_Kleb_pneu_CHS221_V1	-	CHS221
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.04375	45.3	-	LHBI01	60	4816	4600	7/28/16	4/17/17	Contig	FDA/CFSAN	SAMN03941074	GCA_001696215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/215/GCA_001696215.1_ASM169621v1	28330888	CFSAN018766
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.32594	28.5	-	CZZJ01	371	4014	3889	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664070	GCA_900008715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/715/GCA_900008715.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA363983	363983	Proteobacteria	Gammaproteobacteria	4.03425	47.5	-	MWID01	101	3831	3688	4/18/17	4/21/17	Contig	Centro de Investigacao em Saude de Manhica (CISM)	SAMN06263838	GCA_002099125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/125/GCA_002099125.1_ASM209912v1	28219321	CISM_0005
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.95366	68.3	-	LXDC01	173	7228	6678	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208780	GCA_001980625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/625/GCA_001980625.1_ASM198062v1	-	MSHR5086
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.69234	50.7	-	CWUN01	630	5620	4267	7/16/15	2/24/17	Scaffold	SC	SAMEA3345018	GCA_001254695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/695/GCA_001254695.1_H14142025101	-	25101ss_1
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.38605	38.2	-	CCZK01	36	3084	2906	10/21/14	3/25/17	Scaffold	ROSLIN	SAMEA2627153	GCA_000823525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/525/GCA_000823525.1_12_4480	-	12_4480
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05187	41.2	-	FIPD01	22	2053	1952	2/10/16	3/19/17	Contig	SC	SAMEA1566142	GCA_900054305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/305/GCA_900054305.1_8337_6_78	-	EN633
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.01577	35.2	-	CGBG01	25	2071	1966	3/15/15	3/18/17	Contig	SC	SAMEA1031412	GCA_001348535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/535/GCA_001348535.1_6753_5_24	-	B41VS
Acinetobacter baumannii 34654	1310581	PRJNA194657	194657	Proteobacteria	Gammaproteobacteria	4.10293	39.1	-	JEZL01	105	4108	3735	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02371042	GCA_000581515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/515/GCA_000581515.1_ASM58151v1	-	34654
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.34191	66.4	-	JUAD01	78	6048	5868	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105402	GCA_000797055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/055/GCA_000797055.1_AZPAE12411	25367914	AZPAE12411
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.09208	51.8	-	FEVZ01	76	2409	2062	2/9/16	3/21/17	Scaffold	SC	SAMEA2674100	GCA_900019925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/925/GCA_900019925.1_14324_4_48	-	2842STDY5881293
Helicobacter pylori	210	PRJNA287077	287077	Proteobacteria	delta/epsilon subdivisions	1.55566	39.1	-	LFKF01	22	1553	1397	7/31/15	3/26/17	Contig	University of Malaya-University of Western Australia	SAMN03776045	GCA_001189655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/655/GCA_001189655.1_ASM118965v1	-	UM209
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.06058	39.6	-	CMRB01	65	2289	2056	3/22/15	3/11/17	Contig	SC	SAMEA2061741	GCA_001095525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/525/GCA_001095525.1_9803_8_28	-	23F
Escherichia coli O104:H4 str. 11-4632 C3	1068619	PRJNA70743	70743	Proteobacteria	Gammaproteobacteria	5.41492	50.6	-	AFVC01	9	5693	5282	10/31/11	2/22/17	Scaffold	Broad Institute	SAMN00715310	GCA_000235085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/085/GCA_000235085.1_Esch_coli_11-4632_C3_V2	22315421	11-4632 C3
Mycobacterium tuberculosis M1023	1448625	PRJNA235636	235636	Terrabacteria group	Actinobacteria	4.431	65.5	-	JKPP01	5	4277	4101	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598971	GCA_000654535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/535/GCA_000654535.1_Myco_tube_M1023_V1	-	M1023
Listeria monocytogenes	1639	PRJNA299686	299686	Terrabacteria group	Firmicutes	2.88113	37.9	-	LMTM01	11	2929	2873	11/5/15	3/1/17	Contig	PHO	SAMN04211877	GCA_001432365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/365/GCA_001432365.1_ASM143236v1	26769922	F6540
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64471	30.4	-	CUMZ01	18	1738	1635	3/31/15	3/18/17	Contig	SC	SAMEA1010391	GCA_001236445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/445/GCA_001236445.1_7065_7_5	-	OXC6351
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20084824	1412478	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007467.1/CP007467.2	-	1	4669	4412	4/2/14	3/2/17	Chromosome	LFZ	SAMN02384199	GCA_000626495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/495/GCA_000626495.2_ASM62649v2	24786953	SA20084824
Staphylococcus aureus M0678	1388452	PRJNA216623	216623	Terrabacteria group	Firmicutes	2.85944	32.8	-	JBCZ01	52	3006	2822	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325576	GCA_000528315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/315/GCA_000528315.1_Stap_aure_M0678_V1	-	M0678
Staphylococcus aureus M0679	1388453	PRJNA216624	216624	Terrabacteria group	Firmicutes	2.92892	32.9	-	JBCY01	70	3120	2937	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325577	GCA_000528335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/335/GCA_000528335.1_Stap_aure_M0679_V1	-	M0679
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20094177	1412479	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007468.1/CP007468.2	-	1	4707	4449	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384200	GCA_000626515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/515/GCA_000626515.2_ASM62651v2	24786953	SA20094177
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.74202	30.3	-	CUTA01	14	1856	1762	3/31/15	3/18/17	Contig	SC	SAMEA1401150	GCA_001236545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/545/GCA_001236545.1_7213_3_19	-	OXC6562
Listeria monocytogenes	1639	PRJNA301128	301128	Terrabacteria group	Firmicutes	2.917	37.9	-	LMXJ01	22	2977	2879	11/20/15	2/28/17	Contig	"Institute for Medical Microbiology and Hygiene, Graz"	SAMN04235878	GCA_001447225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/447/225/GCA_001447225.1_ASM144722v1	26798096	SLCC208
Mycobacterium tuberculosis M1022	1448626	PRJNA235637	235637	Terrabacteria group	Actinobacteria	4.42545	65.5	-	JKPO01	4	4287	4104	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598972	GCA_000654555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/555/GCA_000654555.1_Myco_tube_M1022_V1	-	M1022
Escherichia coli O104:H4 str. 11-4632 C2	1068618	PRJNA70741	70741	Proteobacteria	Gammaproteobacteria	5.4337	50.6	-	AFVB01	7	5721	5313	10/31/11	2/22/17	Scaffold	Broad Institute	SAMN00715309	GCA_000235105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/105/GCA_000235105.1_Esch_coli_11-4632_C2_V2	22315421	11-4632 C2
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.02854	39.6	-	CKOC01	61	2220	1998	3/21/15	3/11/17	Contig	SC	SAMEA1023666	GCA_001095545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/545/GCA_001095545.1_6673_8_11	-	SMRU251
Helicobacter pylori	210	PRJNA287100	287100	Proteobacteria	delta/epsilon subdivisions	1.61324	39.1	-	LFKH01	28	1604	1438	7/31/15	4/10/17	Contig	University of Malaya-University of Western Australia	SAMN03776159	GCA_001189675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/675/GCA_001189675.1_ASM118967v1	-	UM228
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.19789	51.6	-	FFBB01	103	2557	2186	2/9/16	3/21/17	Scaffold	SC	SAMEA2674282	GCA_900020185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/185/GCA_900020185.1_14555_5_71	-	2842STDY5881412
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.23831	65.6	-	JTWT01	184	7067	6744	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105490	GCA_000797085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/085/GCA_000797085.1_AZPAE14713	25367914	AZPAE14713
Acinetobacter baumannii 34001	1310578	PRJNA194654	194654	Proteobacteria	Gammaproteobacteria	3.89111	39.1	-	JEZK01	338	3888	3594	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02371041	GCA_000581535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/535/GCA_000581535.1_ASM58153v1	-	34001
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.1118	35.3	-	CHDK01	17	2195	2078	4/21/15	3/18/17	Contig	SC	SAMEA1031418	GCA_001348615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/615/GCA_001348615.1_6753_5_3	-	B24VD
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05356	41.1	-	FIPQ01	21	2064	1959	2/10/16	4/2/17	Contig	SC	SAMEA1566186	GCA_900054315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/315/GCA_900054315.1_8525_5_29	-	SS24
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.38151	38.2	-	CDCY01	36	3081	2924	11/4/14	3/25/17	Scaffold	ROSLIN	SAMEA2627154	GCA_000823545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/545/GCA_000823545.1_12_4499	-	12_4499
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.72855	50.6	-	CWUG01	515	5686	4386	7/17/15	2/24/17	Scaffold	SC	SAMEA3345044	GCA_001254715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/715/GCA_001254715.1_H14126044401	-	44401ss_1
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.04926	68.3	-	LXDF01	126	7334	6811	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208783	GCA_001980645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/645/GCA_001980645.1_ASM198064v1	-	MSHR5100
Vibrio cholerae	666	PRJNA355961	355961	Proteobacteria	Gammaproteobacteria	3.93364	47.5	-	MQVH01	117	3727	3534	4/20/17	4/22/17	Contig	"Russian Research Anti-plague Institute ""Microbe"""	SAMN06099135	GCA_002102575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/575/GCA_002102575.1_ASM210257v1	-	G_33
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.12959	29.2	-	FAGQ01	1445	3784	3505	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664255	GCA_900008725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/725/GCA_900008725.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.08539	45.3	-	LHBJ01	85	4874	4609	7/28/16	4/17/17	Contig	FDA/CFSAN	SAMN03941075	GCA_001696225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/225/GCA_001696225.1_ASM169622v1	28330888	CFSAN018767
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.58181	57.2	-	LEZH01	8	5600	5357	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280363	GCA_001033135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/135/GCA_001033135.1_Kleb_pneu_CHS223_V1	-	CHS223
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.3048	37.2	-	JVTX01	110	3453	3256	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197297	GCA_001053375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/375/GCA_001053375.1_ASM105337v1	26230489	132_EFLS
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.93707	37.9	-	FXFO01	152	3040	2847	4/26/17	5/6/17	Contig	SC	SAMEA3893894	GCA_900179005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/005/GCA_900179005.1_19789_5_58	-	VREN3652
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.71757	67.6	-	CSPT01	1225	3773	2966	3/23/15	3/26/17	Scaffold	SC	SAMEA751180	GCA_001212625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/625/GCA_001212625.1_5633_3_4	-	B163
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.71405	31.3	-	FBHO01	30	1788	1694	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683262	GCA_001493715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/715/GCA_001493715.1_CCN205	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.27716	54.9	-	FKFH01	61	5219	4974	4/6/16	3/28/17	Scaffold	SC	SAMEA2273197	GCA_900077445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/445/GCA_900077445.1_12045_4_69	-	e600
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.29577	64.1	-	FSNE01	19	5302	5154	12/14/16	3/21/17	Contig	SC	SAMEA2070707	GCA_900139485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/485/GCA_900139485.1_10625_5_2	-	87
Pseudomonas sp. Irchel s3h9	2009192	PRJEB21289	398218	Proteobacteria	Gammaproteobacteria	6.47624	59.1	-	FYDH01	34	5847	5675	8/15/17	8/28/17	Scaffold	UNIVERSITY OF ZUERICH	SAMEA104128672	GCA_900187475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/475/GCA_900187475.1_s3h9	-	-
Streptomyces sp. 4F	1751294	PRJNA362790	362790	Terrabacteria group	Actinobacteria	7.55099	71.9	-	NACY01	3094	8385	7758	4/21/17	4/21/17	Scaffold	University of Tulsa	SAMN06248758	GCA_002104855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/855/GCA_002104855.1_ASM210485v1	-	4F
Streptomyces sp. BF-3	1076450	PRJNA362790	362790	Terrabacteria group	Actinobacteria	7.95013	71.5	-	NACZ01	2103	7983	7411	4/21/17	4/21/17	Scaffold	University of Tulsa	SAMN06248757	GCA_002104865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/865/GCA_002104865.1_ASM210486v1	-	BF-3
Pseudomonas sp. Irchel s3a12	2009047	PRJEB21289	398218	Proteobacteria	Gammaproteobacteria	6.48143	59.1	-	FYDN01	34	5830	5677	8/15/17	8/28/17	Scaffold	UNIVERSITY OF ZUERICH	SAMEA104128663	GCA_900187485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/485/GCA_900187485.1_s3a12	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.22863	64.2	-	FVUF01	31	5257	5108	3/10/17	3/18/17	Contig	SC	SAMEA2070589	GCA_900139495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/495/GCA_900139495.1_10625_4_9	-	9
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.84213	55.4	-	FKFI01	64	4781	4545	4/6/16	3/28/17	Scaffold	SC	SAMEA2273489	GCA_900077455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/455/GCA_900077455.1_12045_5_65	-	e615
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.63058	31.7	-	FAYV01	20	1665	1598	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683030	GCA_001493735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/735/GCA_001493735.1_H082560569	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.73403	67.6	-	CSPY01	693	3736	3054	3/23/15	3/26/17	Scaffold	SC	SAMEA1931799	GCA_001212645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/645/GCA_001212645.1_5463_5_3	-	B343
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.93267	37.9	-	FXGE01	143	3033	2839	4/26/17	5/6/17	Contig	SC	SAMEA3893896	GCA_900179035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/035/GCA_900179035.1_19789_5_60	-	VREN3640
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.30387	37.2	-	JVTK01	111	3457	3253	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197310	GCA_001053455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/455/GCA_001053455.1_ASM105345v1	26230489	133_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.8628	56.9	-	LEZI01	9	5967	5685	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280364	GCA_001033165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/165/GCA_001033165.1_Kleb_pneu_CHS224_V1	-	CHS224
Vibrio parahaemolyticus	670	PRJNA335428	335428	Proteobacteria	Gammaproteobacteria	5.27022	45	-	MCFR01	550	4944	4705	8/14/16	3/21/17	Contig	PLNW	SAMN05442492	GCA_001704915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/915/GCA_001704915.1_ASM170491v1	-	R10B2_71
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.35123	29	-	FAHP01	1661	3933	3700	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664280	GCA_900008735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/735/GCA_900008735.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA382625	382625	Proteobacteria	Gammaproteobacteria	3.96088	47.6	-	NCTY01	117	3683	3503	4/28/17	5/3/17	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN06711158	GCA_002114205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/205/GCA_002114205.1_ASM211420v1	-	617
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.94191	68.3	-	LXDG01	281	7245	6496	1/31/17	4/10/17	Contig	Northern Arizona University	SAMN04208784	GCA_001980655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/655/GCA_001980655.1_ASM198065v1	-	MSHR5104
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.94449	50.4	-	CXND01	449	5622	4757	7/16/15	2/24/17	Scaffold	SC	SAMEA2057994	GCA_001254755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/755/GCA_001254755.1_9870_6_39	-	143983
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.34207	38.2	-	CCZL01	27	3038	2824	10/21/14	3/25/17	Scaffold	ROSLIN	SAMEA2627155	GCA_000823565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/565/GCA_000823565.1_12_4555	-	12_4555
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05725	41.1	-	FIQZ01	21	2070	1960	2/10/16	3/19/17	Contig	SC	SAMEA1566159	GCA_900054325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/325/GCA_900054325.1_8525_5_66	-	VS2903
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.03648	35.4	-	CHDL01	17	2083	1961	4/21/15	3/18/17	Contig	SC	SAMEA1031427	GCA_001348655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/655/GCA_001348655.1_6753_5_25	-	B50VS
Acinetobacter baumannii 29280	1310595	PRJNA194671	194671	Proteobacteria	Gammaproteobacteria	3.92699	39.1	-	JEZI01	390	3910	3610	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02371040	GCA_000581555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/555/GCA_000581555.1_ASM58155v1	-	29280
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.4451	66.4	-	JUAC01	103	6114	5922	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105403	GCA_000797105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/105/GCA_000797105.1_AZPAE12412	25367914	AZPAE12412
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.17132	51.5	-	FEPS01	91	2521	2178	2/9/16	3/19/17	Scaffold	SC	SAMEA2674385	GCA_900021105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/105/GCA_900021105.1_14324_5_48	-	2842STDY5881581
Helicobacter pylori	210	PRJNA287101	287101	Proteobacteria	delta/epsilon subdivisions	1.64311	38.6	-	LFKI01	16	1622	1468	7/31/15	3/26/17	Contig	University of Malaya-University of Western Australia	SAMN03776161	GCA_001189685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/685/GCA_001189685.1_ASM118968v1	-	UM246
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.11115	39.5	-	COAU02	182	2284	2076	3/22/15	3/11/17	Contig	SC	SAMEA1463197	GCA_001095625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/625/GCA_001095625.2_7622_2_22	-	BR1068
Escherichia coli O104:H4 str. 11-4632 C1	1068617	PRJNA70739	70739	Proteobacteria	Gammaproteobacteria	5.41478	50.6	-	AFVA01	9	5708	5300	10/31/11	2/22/17	Scaffold	Broad Institute	SAMN00715308	GCA_000235125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/125/GCA_000235125.1_Esch_coli_11-4632_C1_V2	22315421	11-4632 C1
Mycobacterium tuberculosis M1024	1448627	PRJNA235638	235638	Terrabacteria group	Actinobacteria	4.43494	65.5	-	JKPN01	5	4276	4081	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598973	GCA_000654575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/575/GCA_000654575.1_Myco_tube_M1024_V1	-	M1024
Listeria monocytogenes	1639	PRJNA295260	295260	Terrabacteria group	Firmicutes	2.89768	37.9	-	LJPD01	10	2964	2876	12/9/15	2/28/17	Contig	Teagasc Food Research Centre	SAMN04044610	GCA_001463975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/975/GCA_001463975.1_ASM146397v1	27257200	944
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.76817	30.4	-	CUMV01	27	1893	1772	3/31/15	3/18/17	Contig	SC	SAMEA1010577	GCA_001236605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/605/GCA_001236605.1_7065_7_46	-	OXC6392
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20094301	1412505	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68583	52.2	chromosome:NZ_CP007469.1/CP007469.2	-	1	4708	4448	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384226	GCA_000626535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/535/GCA_000626535.2_ASM62653v2	24786953	SA20094301
Staphylococcus aureus M0680	1388454	PRJNA216625	216625	Terrabacteria group	Firmicutes	2.90533	32.8	-	JBCX01	58	3071	2887	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325578	GCA_000528355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/355/GCA_000528355.1_Stap_aure_M0680_V1	-	M0680
Staphylococcus aureus M0681	1388455	PRJNA216626	216626	Terrabacteria group	Firmicutes	3.01717	32.8	-	JBCW01	78	3229	3044	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325579	GCA_000528375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/375/GCA_000528375.1_Stap_aure_M0681_V1	-	M0681
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20111510	1412549	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007498.2/CP007498.2	-	1	4709	4448	4/2/14	3/2/17	Chromosome	LFZ	SAMN02384270	GCA_000626555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/555/GCA_000626555.2_ASM62655v2	24786953	EC20111510
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.78608	30.2	-	CUTV01	29	1879	1738	3/31/15	3/18/17	Contig	SC	SAMEA1401660	GCA_001236645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/645/GCA_001236645.1_7213_3_38	-	OXC6581
Listeria monocytogenes	1639	PRJNA295145	295145	Terrabacteria group	Firmicutes	2.89796	37.9	-	LJPF01	13	2963	2876	12/9/15	3/1/17	Contig	Teagasc Food Research Centre	SAMN04041661	GCA_001463985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/985/GCA_001463985.1_ASM146398v1	27257200	2993
Mycobacterium tuberculosis M1025	1448628	PRJNA235639	235639	Terrabacteria group	Actinobacteria	4.40818	65.6	-	JKPM01	74	4304	4092	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598974	GCA_000654595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/595/GCA_000654595.1_Myco_tube_M1025_V1	-	M1025
Escherichia coli O104:H4 str. 11-4623	1068616	PRJNA70737	70737	Proteobacteria	Gammaproteobacteria	5.42223	50.6	-	AFUZ01	8	5738	5325	10/31/11	2/22/17	Scaffold	Broad Institute	SAMN00715307	GCA_000235145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/145/GCA_000235145.1_Esch_coli_11-4623_V2	22315421	Nov-23
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08598	39.6	-	CNXH02	167	2247	2048	3/23/15	3/5/17	Contig	SC	SAMEA1032676	GCA_001095645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/645/GCA_001095645.2_7001_3_17	-	R34-3154
Helicobacter pylori	210	PRJNA287105	287105	Proteobacteria	delta/epsilon subdivisions	1.56901	38.8	-	LFKJ01	28	1584	1414	7/31/15	3/26/17	Contig	University of Malaya-University of Western Australia	SAMN03776162	GCA_001189695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/695/GCA_001189695.1_ASM118969v1	-	UM291
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16308	51.5	-	FEPX01	96	2511	2139	2/9/16	3/21/17	Scaffold	SC	SAMEA2674404	GCA_900021115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/115/GCA_900021115.1_14324_5_67	-	2842STDY5881600
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.74236	66.3	-	JUAB01	114	6438	6045	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105404	GCA_000797125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/125/GCA_000797125.1_AZPAE12413	25367914	AZPAE12413
Acinetobacter baumannii 1289546	1310600	PRJNA194676	194676	Proteobacteria	Gammaproteobacteria	4.13211	39.1	-	JEZG01	133	4129	3827	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02371035	GCA_000581575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/575/GCA_000581575.1_ASM58157v1	-	1289546
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.02621	35.2	-	CHDM01	31	2092	1968	4/21/15	3/18/17	Contig	SC	SAMEA1031442	GCA_001348715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/715/GCA_001348715.1_6753_5_28	-	B96V
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05095	41.1	-	FIRC01	19	2064	1953	2/10/16	3/19/17	Contig	SC	SAMEA1566172	GCA_900054335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/335/GCA_900054335.1_8525_5_65	-	SS102
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.33863	38.2	-	CCZM01	33	3037	2862	10/21/14	3/25/17	Scaffold	ROSLIN	SAMEA2627156	GCA_000823585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/585/GCA_000823585.1_12_4561	-	12_4561
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.65954	50.8	-	CXHS01	396	5090	4474	7/16/15	2/24/17	Scaffold	SC	SAMEA2004802	GCA_001254775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/775/GCA_001254775.1_8289_7_47	-	75691
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.90887	68.3	-	LXDH01	175	7172	6526	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208785	GCA_001980675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/675/GCA_001980675.1_ASM198067v1	-	MSHR5105
Vibrio cholerae O139	45888	PRJNA385889	385889	Proteobacteria	Gammaproteobacteria	3.9842	47.5	-	NGQU01	85	3801	3600	6/14/17	6/19/17	Contig	Christian Medical College	SAMN06920126	GCA_002194155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/155/GCA_002194155.1_ASM219415v1	-	FC1877
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	3.88185	28.3	-	FAHL01	278	3543	3393	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664281	GCA_900008745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/745/GCA_900008745.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA324112	324112	Proteobacteria	Gammaproteobacteria	5.00853	45.4	-	MBTR01	57	4784	4579	8/18/16	3/20/17	Contig	Texas A&M University - Corpus Christi	SAMN05195240	GCA_001707995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/995/GCA_001707995.1_ASM170799v1	-	KVp10
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.91708	56.9	-	LEZJ01	5	6019	5721	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280365	GCA_001033175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/175/GCA_001033175.1_Kleb_pneu_CHS225_V1	-	CHS225
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.20343	37.3	-	JVTG01	95	3342	3139	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197314	GCA_001053475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/475/GCA_001053475.1_ASM105347v1	26230489	1333_EFLS
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.93543	37.9	-	FXHR01	145	3042	2845	4/26/17	5/6/17	Contig	SC	SAMEA3893657	GCA_900179205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/205/GCA_900179205.1_19789_6_181	-	VREN3639
Bordetella pertussis	520	PRJEB2103	203747	Proteobacteria	Betaproteobacteria	3.76024	67.7	-	CGID01	629	3735	3116	3/15/15	3/26/17	Scaffold	SC	SAMEA751268	GCA_001319225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/225/GCA_001319225.1_4846_7_6	-	B233
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75086	31.2	-	FBCV01	31	1835	1746	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683135	GCA_001493755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/755/GCA_001493755.1_EC6173	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.06796	55.6	-	FKFJ01	50	5070	4826	4/6/16	3/28/17	Scaffold	SC	SAMEA2273199	GCA_900077465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/465/GCA_900077465.1_12045_4_71	-	e621
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.04001	64.2	-	FVUI01	18	5021	4888	3/10/17	3/18/17	Contig	SC	SAMEA2070297	GCA_900139515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/515/GCA_900139515.1_10625_5_4	-	89
Pseudomonas sp. Irchel 3H9	2009043	PRJEB21289	398218	Proteobacteria	Gammaproteobacteria	6.08374	59.8	-	FYDK01	18	5589	5390	8/15/17	8/28/17	Scaffold	UNIVERSITY OF ZUERICH	SAMEA104128684	GCA_900187495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/495/GCA_900187495.1_3H9	-	-
Streptomyces sp. ScaeMP-e48	1100823	PRJEB14432	325914	Terrabacteria group	Actinobacteria	8.32524	71.3	-	FMHN01	39	7448	7369	8/17/16	8/18/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN05005154	GCA_900090155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/090/155/GCA_900090155.1_IMG-taxon_2518645618_annotated_assembly	-	ScaeMP-e48
Streptomyces sp. AmelKG-E11A	1100822	PRJEB14431	325913	Terrabacteria group	Actinobacteria	8.3863	72.2	-	FMHM01	60	7200	7109	8/17/16	8/22/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05005153	GCA_900090165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/090/165/GCA_900090165.1_IMG-taxon_2518645617_annotated_assembly	-	AmelKG-E11A
Pseudomonas sp. Irchel s3h17	2009182	PRJEB21289	398218	Proteobacteria	Gammaproteobacteria	5.50867	60.5	-	FYDL01	45	5176	4890	8/15/17	8/28/17	Scaffold	UNIVERSITY OF ZUERICH	SAMEA104128670	GCA_900187505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/505/GCA_900187505.1_s3h17	-	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98357	64.2	-	FVUH01	13	4997	4872	3/10/17	3/18/17	Contig	SC	SAMEA2071242	GCA_900139525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/525/GCA_900139525.1_10625_5_45	-	130
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.18997	54.5	-	FKFL01	59	5228	4970	4/6/16	3/28/17	Scaffold	SC	SAMEA2273202	GCA_900077475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/475/GCA_900077475.1_12045_4_73	-	e628
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.79373	31.2	-	FBIE01	71	1834	1713	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683277	GCA_001493775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/775/GCA_001493775.1_SWAN288	-	n/a
Bordetella pertussis	520	PRJEB2103	203747	Proteobacteria	Betaproteobacteria	3.78973	67.8	-	CFYL01	567	3729	3151	3/15/15	3/26/17	Scaffold	SC	SAMEA751270	GCA_001319245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/245/GCA_001319245.1_4846_7_7	-	B230
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.93537	37.9	-	FXHO01	146	3038	2846	4/26/17	5/6/17	Contig	SC	SAMEA3893660	GCA_900179275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/275/GCA_900179275.1_19789_6_183	-	VREN3644
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.98751	37.4	-	JVSV01	73	3081	2933	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197325	GCA_001053515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/515/GCA_001053515.1_ASM105351v1	26230489	136_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.67789	57.2	-	LEZK01	5	5735	5474	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280366	GCA_001033205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/205/GCA_001033205.1_Kleb_pneu_CHS226_V1	-	CHS226
Vibrio parahaemolyticus	670	PRJNA339460	339460	Proteobacteria	Gammaproteobacteria	5.1045	45.3	-	MDTV01	56	4894	4720	9/2/16	3/21/17	Contig	Texas A&M - Corpus Christi	SAMN05591502	GCA_001720365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/365/GCA_001720365.1_ASM172036v1	-	Klin
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.21173	28.9	-	FAIR01	1230	3810	3626	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664311	GCA_900008755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/755/GCA_900008755.1_Peptoclostridium_difficile	-	-
Vibrio cholerae O139	45888	PRJNA385889	385889	Proteobacteria	Gammaproteobacteria	4.01351	47.5	-	NGQR01	103	3847	3620	6/14/17	6/19/17	Contig	Christian Medical College	SAMN06920129	GCA_002194165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/165/GCA_002194165.1_ASM219416v1	-	FC3611a
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.8728	68	-	LXDI01	364	7330	6664	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208786	GCA_001980695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/695/GCA_001980695.1_ASM198069v1	-	5598b
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.68294	50.7	-	CWXJ01	372	5136	4508	7/16/15	2/24/17	Scaffold	SC	SAMEA2445689	GCA_001254795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/795/GCA_001254795.1_12971_8_11	-	H082020297
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.34955	38.3	-	CDCX01	32	3060	2794	11/4/14	3/25/17	Scaffold	ROSLIN	SAMEA2627157	GCA_000823605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/605/GCA_000823605.1_12_4563	-	12_4563
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.06282	41.1	-	FIRT01	25	2075	1963	2/10/16	3/19/17	Contig	SC	SAMEA1566022	GCA_900054345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/345/GCA_900054345.1_8525_5_84	-	VS3804
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.03941	35.3	-	CGHZ01	68	2099	1986	3/15/15	3/18/17	Contig	SC	SAMEA1031448	GCA_001348735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/735/GCA_001348735.1_6753_5_17	-	RBH06
Acinetobacter baumannii 942194	1310591	PRJNA194667	194667	Proteobacteria	Gammaproteobacteria	4.00878	39	-	JFAC01	118	3913	3636	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02371055	GCA_000581595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/595/GCA_000581595.1_ASM58159v1	-	942194
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.73682	66.3	-	JUAA01	112	6427	6044	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105405	GCA_000797145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/145/GCA_000797145.1_AZPAE12414	25367914	AZPAE12414
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.1262	51.7	-	FEPY01	82	2493	2171	2/9/16	3/19/17	Scaffold	SC	SAMEA2674413	GCA_900021125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/125/GCA_900021125.1_14324_5_76	-	2842STDY5881609
Helicobacter pylori	210	PRJNA287084	287084	Proteobacteria	delta/epsilon subdivisions	1.63072	38.8	-	LFKG01	13	1608	1447	7/31/15	3/26/17	Contig	University of Malaya-University of Western Australia	SAMN03776113	GCA_001189735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/735/GCA_001189735.1_ASM118973v1	-	UM211
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00763	39.7	-	CNXJ02	112	2182	1989	3/23/15	3/11/17	Contig	SC	SAMEA1032734	GCA_001095745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/745/GCA_001095745.2_7001_3_19	-	R34-3156
Escherichia coli O104:H4 str. 11-4522	1068615	PRJNA70735	70735	Proteobacteria	Gammaproteobacteria	5.40216	50.6	-	AFUY01	8	5690	5288	10/31/11	2/22/17	Scaffold	Broad Institute	SAMN00715306	GCA_000235165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/165/GCA_000235165.1_Esch_coli_11-4522_V2	22315421	Nov-22
Mycobacterium tuberculosis M1026	1448629	PRJNA235640	235640	Terrabacteria group	Actinobacteria	4.41419	65.5	-	JKPL01	7	4275	4090	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598975	GCA_000654615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/615/GCA_000654615.1_Myco_tube_M1026_V1	-	M1026
Listeria monocytogenes	1639	PRJNA295464	295464	Terrabacteria group	Firmicutes	2.85746	37.9	-	LJPE01	12	2901	2822	12/9/15	3/1/17	Contig	Teagasc Food Research Centre	SAMN04074749	GCA_001463995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/995/GCA_001463995.1_ASM146399v1	27257200	2932
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.77343	30.2	-	CURO01	20	1899	1769	3/31/15	3/18/17	Contig	SC	SAMEA1010365	GCA_001236665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/665/GCA_001236665.1_7092_1_71	-	OXC6518
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20100134	1412465	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007359.2/CP007359.2	-	1	4710	4454	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384186	GCA_000831025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/025/GCA_000831025.2_ASM83102v2	24786953	EC20100134
Staphylococcus aureus M0682	1388456	PRJNA216627	216627	Terrabacteria group	Firmicutes	2.85485	32.8	-	JBCV01	39	3013	2841	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325580	GCA_000528395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/395/GCA_000528395.1_Stap_aure_M0682_V1	-	M0682
Staphylococcus aureus M0683	1388457	PRJNA216628	216628	Terrabacteria group	Firmicutes	2.889	32.9	-	JBCU01	64	3052	2888	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325581	GCA_000528415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/415/GCA_000528415.1_Stap_aure_M0683_V1	-	M0683
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20100130	1412464	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68585	52.2	chromosome:NZ_CP007358.2/CP007358.2	-	1	4707	4451	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384185	GCA_000831045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/045/GCA_000831045.2_ASM83104v2	24786953	EC20100130
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.72278	30.3	-	CULW01	17	1835	1721	3/31/15	3/18/17	Contig	SC	SAMEA1010411	GCA_001236705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/705/GCA_001236705.1_7065_7_22	-	OXC6368
Listeria monocytogenes	1639	PRJNA246743	246743	Terrabacteria group	Firmicutes	2.91292	37.8	-	JNGJ01	29	2953	2904	12/14/15	3/1/17	Contig	Centers for Disease Control and Prevention	SAMN02769891	GCA_001466015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/015/GCA_001466015.1_ASM146601v1	-	J2692
Mycobacterium tuberculosis M1034	1448632	PRJNA235643	235643	Terrabacteria group	Actinobacteria	4.42375	65.6	-	JKPI01	75	4320	4099	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598978	GCA_000654635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/635/GCA_000654635.1_Myco_tube_M1034_V1	-	M1034
Escherichia coli O104:H4 str. 11-4404	1068614	PRJNA70733	70733	Proteobacteria	Gammaproteobacteria	5.41728	50.6	-	AFUX01	11	5728	5309	10/31/11	2/22/17	Scaffold	Broad Institute	SAMN00715305	GCA_000235185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/185/GCA_000235185.1_Esch_coli_11-4404_V2	22315421	Nov-04
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.00863	39.7	-	CLVR01	53	2171	1949	3/21/15	3/4/17	Contig	SC	SAMEA1026217	GCA_001095785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/785/GCA_001095785.1_6983_3_67	-	SMRU2275
Helicobacter pylori	210	PRJNA287181	287181	Proteobacteria	delta/epsilon subdivisions	1.62316	38.7	-	LFKK01	19	1608	1441	7/31/15	3/26/17	Contig	University of Malaya-University of Western Australia	SAMN03777199	GCA_001189755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/755/GCA_001189755.1_ASM118975v1	-	UM352
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.20702	51.6	-	FEQH01	92	2579	2210	2/9/16	3/21/17	Scaffold	SC	SAMEA2674519	GCA_900021135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/135/GCA_900021135.1_14355_7_53	-	2842STDY5881682
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.74039	66.3	-	JTZZ01	84	6424	6085	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105406	GCA_000797165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/165/GCA_000797165.1_AZPAE12415	25367914	AZPAE12415
Acinetobacter baumannii 993520	1310555	PRJNA194631	194631	Proteobacteria	Gammaproteobacteria	4.15684	39.2	-	JFAB01	109	4129	3874	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02371059	GCA_000581615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/615/GCA_000581615.1_ASM58161v1	-	993520
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.13766	35.3	-	CGCF01	36	2185	2070	3/15/15	3/18/17	Contig	SC	SAMEA1031532	GCA_001349035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/035/GCA_001349035.1_6753_5_4	-	B37VS
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05356	41.2	-	FIRU01	26	2053	1957	2/10/16	3/19/17	Contig	SC	SAMEA1566207	GCA_900054355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/355/GCA_900054355.1_8525_5_85	-	VS3861
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.34319	38.2	-	CCZN01	32	3045	2863	10/21/14	3/25/17	Scaffold	ROSLIN	SAMEA2627158	GCA_000823625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/625/GCA_000823625.1_12_4903	-	12_4903
Shigella sonnei	624	PRJEB2460	204320	Proteobacteria	Gammaproteobacteria	4.545	50.7	-	CXFK01	360	4930	4372	7/16/15	2/24/17	Scaffold	SC	SAMEA1027672	GCA_001254835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/835/GCA_001254835.1_6350_1_15	-	sh96-2938
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.06761	68.2	-	LXDK01	154	7341	6819	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208788	GCA_001980725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/725/GCA_001980725.1_ASM198072v1	-	316a
Vibrio cholerae O139	45888	PRJNA385889	385889	Proteobacteria	Gammaproteobacteria	4.01371	47.5	-	NGQQ01	93	3838	3585	6/14/17	6/19/17	Contig	Christian Medical College	SAMN06920130	GCA_002194185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/185/GCA_002194185.1_ASM219418v1	-	FC3611b
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.12213	28.5	-	FAIN01	296	3764	3647	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664309	GCA_900008765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/765/GCA_900008765.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.18592	45.3	-	MIQI01	95	4983	4801	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN03358816	GCA_001726165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/165/GCA_001726165.1_ASM172616v1	-	GCSL_R5
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.92328	56.9	-	LEZL01	8	6041	5743	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280368	GCA_001033215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/215/GCA_001033215.1_Kleb_pneu_CHS228_V1	-	CHS228
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.96521	37.4	-	JVQS01	54	3012	2880	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197380	GCA_001054535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/535/GCA_001054535.1_ASM105453v1	26230489	189_EFLS
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.93448	37.9	-	FXHC01	148	3031	2841	4/26/17	5/6/17	Contig	SC	SAMEA3893659	GCA_900179355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/355/GCA_900179355.1_19789_6_182	-	VREN3642
Bordetella pertussis	520	PRJEB2103	203747	Proteobacteria	Betaproteobacteria	3.77792	67.8	-	CIGM01	801	3766	3132	4/21/15	3/26/17	Scaffold	SC	SAMEA751394	GCA_001319265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/265/GCA_001319265.1_4846_8_1	-	B231
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68703	31.3	-	FBMV01	27	1750	1659	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683398	GCA_001493795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/795/GCA_001493795.1_H140460193	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.78848	55.4	-	FKFK01	35	4763	4544	4/6/16	3/28/17	Scaffold	SC	SAMEA2273201	GCA_900077485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/485/GCA_900077485.1_12045_4_72	-	e627
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.99208	64.1	-	FSNH01	15	4999	4865	12/14/16	4/2/17	Contig	SC	SAMEA2070412	GCA_900139535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/535/GCA_900139535.1_10625_5_46	-	131
Pseudomonas sp. Irchel s3f10	2009137	PRJEB21289	398218	Proteobacteria	Gammaproteobacteria	6.49383	59.1	-	FYDZ01	37	5883	5720	8/15/17	8/28/17	Scaffold	UNIVERSITY OF ZUERICH	SAMEA104128668	GCA_900187515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/515/GCA_900187515.1_s3f10	-	-
Streptomyces sp. LamerLS-316	1157630	PRJEB14429	325906	Terrabacteria group	Actinobacteria	7.86619	71.6	-	FMHK01	23	7055	6978	8/17/16	8/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05005155	GCA_900090175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/090/175/GCA_900090175.1_IMG-taxon_2515154095_annotated_assembly	-	LamerLS-316
Streptomyces sp. AmelKG-D3	1115568	PRJEB14434	325912	Terrabacteria group	Actinobacteria	7.9695	72.1	-	FMHO01	100	7039	6948	8/17/16	8/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05005151	GCA_900090185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/090/185/GCA_900090185.1_IMG-taxon_2519899650_annotated_assembly	-	AmelKG-D3
Pseudomonas sp. Irchel s3a10	2009045	PRJEB21289	398218	Proteobacteria	Gammaproteobacteria	6.02441	60.3	-	FYDR01	24	5471	5296	8/15/17	8/28/17	Scaffold	UNIVERSITY OF ZUERICH	SAMEA104128662	GCA_900187525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/525/GCA_900187525.1_s3a10	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.08954	64.1	-	FSNJ01	18	5122	4991	12/14/16	3/21/17	Contig	SC	SAMEA2071244	GCA_900139565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/565/GCA_900139565.1_10625_5_51	-	136
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.84619	55.4	-	FKFM01	36	4834	4608	4/6/16	3/28/17	Scaffold	SC	SAMEA2273203	GCA_900077495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/495/GCA_900077495.1_12045_4_74	-	e629
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.79788	31.1	-	FAZI01	47	1868	1748	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683041	GCA_001493815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/815/GCA_001493815.1_H053320338	-	n/a
Bordetella pertussis	520	PRJEB2103	203747	Proteobacteria	Betaproteobacteria	3.78769	67.8	-	CFWK01	606	3723	3191	3/15/15	3/26/17	Scaffold	SC	SAMEA751397	GCA_001319285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/285/GCA_001319285.1_4846_8_5	-	B228
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.08309	37.5	-	FXHJ01	195	3204	2975	4/26/17	5/6/17	Contig	SC	SAMEA3893544	GCA_900179495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/495/GCA_900179495.1_19789_6_49	-	VREN1626
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.11136	37.1	-	JVPV01	388	3244	3008	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197403	GCA_001054585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/585/GCA_001054585.1_ASM105458v1	26230489	210_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.59836	57.3	-	LEZM01	7	5650	5383	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280369	GCA_001033245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/245/GCA_001033245.1_Kleb_pneu_CHS229_V1	-	CHS229
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.07201	45.3	-	MIQM01	158	4836	4613	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN03358817	GCA_001726175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/175/GCA_001726175.1_ASM172617v1	-	GCSL_R10
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.34479	28.3	-	FAJA01	336	4029	3890	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664323	GCA_900008775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/775/GCA_900008775.1_Peptoclostridium_difficile	-	-
Vibrio cholerae O139	45888	PRJNA385889	385889	Proteobacteria	Gammaproteobacteria	4.0222	47.5	-	NGQS01	98	3844	3650	6/14/17	6/19/17	Contig	Christian Medical College	SAMN06920128	GCA_002194215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/215/GCA_002194215.1_ASM219421v1	-	FC2273
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.11089	68.2	-	LXDJ01	150	7390	6858	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208787	GCA_001980735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/735/GCA_001980735.1_ASM198073v1	-	5598ci
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.88724	50.5	-	CWZM01	426	5455	4704	7/16/15	2/24/17	Scaffold	SC	SAMEA2445747	GCA_001254875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/875/GCA_001254875.1_12971_8_56	-	H140860383
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.35908	38.3	-	CCZO01	46	3073	2898	10/21/14	3/25/17	Scaffold	ROSLIN	SAMEA2627159	GCA_000823645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/645/GCA_000823645.1_12_4904	-	12_4904
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04191	41.1	-	FITA01	20	2056	1928	2/10/16	3/19/17	Contig	SC	SAMEA1566188	GCA_900054365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/365/GCA_900054365.1_8525_5_8	-	FX419
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.13985	35.5	-	CGBQ01	33	2215	2104	3/15/15	3/18/17	Contig	SC	SAMEA1031533	GCA_001349055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/055/GCA_001349055.1_6753_5_14	-	RBH03
Acinetobacter baumannii 947299	1310587	PRJNA194663	194663	Proteobacteria	Gammaproteobacteria	4.05689	39.1	-	JEZY01	306	4063	3743	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02371056	GCA_000581635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/635/GCA_000581635.1_ASM58163v1	-	947299
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.52792	66.2	-	JTZY01	124	6258	5994	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105407	GCA_000797185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/185/GCA_000797185.1_AZPAE12416	25367914	AZPAE12416
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.13394	51.7	-	FEPN01	82	2493	2141	2/9/16	3/21/17	Scaffold	SC	SAMEA2674354	GCA_900021945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/945/GCA_900021945.1_14324_5_17	-	2842STDY5881550
Helicobacter pylori	210	PRJNA287183	287183	Proteobacteria	delta/epsilon subdivisions	1.58224	38.7	-	LFKL01	23	1583	1420	7/31/15	3/26/17	Contig	University of Malaya-University of Western Australia	SAMN03777201	GCA_001189765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/765/GCA_001189765.1_ASM118976v1	-	UM370
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.08733	39.5	-	CMKM01	55	2290	2063	3/23/15	3/4/17	Contig	SC	SAMEA1029390	GCA_001095825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/825/GCA_001095825.1_7054_4_23	-	SMRU3047
Escherichia coli O104:H4 str. 11-3677	1048334	PRJNA68215	68215	Proteobacteria	Gammaproteobacteria	5.41942	50.6	-	AFRM01	14	5736	5318	10/31/11	2/22/17	Scaffold	Broad Institute	SAMN00715303	GCA_000235205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/205/GCA_000235205.1_Esch_coli_11-3677_V2	22315421	Nov-77
Mycobacterium tuberculosis M1210	1448633	PRJNA235644	235644	Terrabacteria group	Actinobacteria	4.42481	65.6	-	JKPH01	5	4298	4120	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598979	GCA_000654655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/655/GCA_000654655.1_Myco_tube_M1210_V1	-	M1210
Listeria monocytogenes	1639	PRJNA246743	246743	Terrabacteria group	Firmicutes	3.12303	37.9	-	JNFI01	59	3175	3108	12/14/15	3/1/17	Contig	Centers for Disease Control and Prevention	SAMN02769890	GCA_001466025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/025/GCA_001466025.1_ASM146602v1	-	L1254
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64729	30.5	-	CUQH01	14	1714	1610	3/31/15	3/18/17	Contig	SC	SAMEA1010482	GCA_001236765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/765/GCA_001236765.1_7092_1_41	-	OXC6488
Salmonella enterica subsp. enterica serovar Pullorum	605	PRJEB5986	242818	Proteobacteria	Gammaproteobacteria	4.62058	52.2	chromosome I:NZ_LK931482.1/LK931482.1	-	1	4695	4262	6/30/14	2/27/17	Chromosome	WTSI	SAMEA2438684	GCA_000953595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/595/GCA_000953595.1_S44987_scaffold1	-	-
Staphylococcus aureus M0684	1388458	PRJNA216629	216629	Terrabacteria group	Firmicutes	2.73133	32.8	-	JBCT01	35	2822	2662	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325582	GCA_000528435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/435/GCA_000528435.1_Stap_aure_M0684_V1	-	M0684
Staphylococcus aureus M0685	1388459	PRJNA216630	216630	Terrabacteria group	Firmicutes	2.89248	32.9	-	JBCS01	42	3040	2868	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325583	GCA_000528455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/455/GCA_000528455.1_Stap_aure_M0685_V1	-	M0685
Salmonella enterica subsp. enterica serovar Enteritidis str. EC20100100	1412586	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68584	52.2	chromosome:NZ_CP007357.2/CP007357.2	-	1	4708	4449	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384307	GCA_000968775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/775/GCA_000968775.2_ASM96877v2	24786953	EC20100100
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.67764	30.3	-	CUNB01	15	1775	1643	3/31/15	3/18/17	Contig	SC	SAMEA1010651	GCA_001236785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/785/GCA_001236785.1_7065_7_50	-	OXC6396
Listeria monocytogenes	1639	PRJNA246743	246743	Terrabacteria group	Firmicutes	2.97418	37.7	-	JNGK01	73	3036	2964	12/14/15	3/1/17	Contig	Centers for Disease Control and Prevention	SAMN02769892	GCA_001466035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/035/GCA_001466035.1_ASM146603v1	-	F4235
Mycobacterium tuberculosis M1212	1448634	PRJNA235645	235645	Terrabacteria group	Actinobacteria	4.4327	65.5	-	JKPG01	6	4279	4095	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598980	GCA_000654675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/675/GCA_000654675.1_Myco_tube_M1212_V1	-	M1212
Escherichia coli O104:H4 str. 09-7901	1048266	PRJNA68213	68213	Proteobacteria	Gammaproteobacteria	5.30007	50.6	-	AFRK01	10	5591	5195	10/31/11	2/22/17	Scaffold	Broad Institute	SAMN00715302	GCA_000235225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/225/GCA_000235225.1_Esch_coli_09-7901_V2	22315421	Sep-01
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05961	39.6	-	CNRD02	164	2217	2021	3/23/15	3/5/17	Contig	SC	SAMEA1032687	GCA_001095865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/865/GCA_001095865.2_6999_1_14	-	R34-3197
Helicobacter pylori	210	PRJNA287199	287199	Proteobacteria	delta/epsilon subdivisions	1.63146	39	-	LFKM01	17	1613	1439	7/31/15	3/26/17	Contig	University of Malaya-University of Western Australia	SAMN03777294	GCA_001189775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/775/GCA_001189775.1_ASM118977v1	-	UM411
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16894	51.6	-	FEPV01	72	2517	2172	2/9/16	3/19/17	Scaffold	SC	SAMEA2674394	GCA_900021955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/955/GCA_900021955.1_14324_5_57	-	2842STDY5881590
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.01052	66	-	JTWU01	228	6881	6573	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105489	GCA_000797205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/205/GCA_000797205.1_AZPAE14712	25367914	AZPAE14712
Acinetobacter baumannii 653020	1310594	PRJNA194670	194670	Proteobacteria	Gammaproteobacteria	3.90908	38.9	-	JEZU01	118	3866	3626	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02371049	GCA_000581655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/655/GCA_000581655.1_ASM58165v1	-	653020
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	1.95584	35.2	-	CDEB01	104	1967	1851	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780141	GCA_001398435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/435/GCA_001398435.1_Mother1	-	Mother1
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.04387	41.1	-	FIFK01	20	2066	1952	2/10/16	3/19/17	Contig	SC	SAMEA1316589	GCA_900054535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/535/GCA_900054535.1_5749_1_11	-	LOLA-SS011
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.28132	38.2	-	CCZP01	27	2963	2794	10/21/14	3/25/17	Scaffold	ROSLIN	SAMEA2627160	GCA_000823665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/665/GCA_000823665.1_12_5064	-	12_5064
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.76522	50.7	-	CXAG01	404	5324	4605	7/16/15	2/24/17	Scaffold	SC	SAMEA2445768	GCA_001254935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/935/GCA_001254935.1_12971_8_76	-	H140920393
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.05592	68.2	-	LXDL01	338	7426	6769	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208789	GCA_001980755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/755/GCA_001980755.1_ASM198075v1	-	316c
Vibrio cholerae O139	45888	PRJNA385889	385889	Proteobacteria	Gammaproteobacteria	4.01692	47.5	-	NGQT01	85	3837	3600	6/14/17	6/19/17	Contig	Christian Medical College	SAMN06920127	GCA_002194235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/235/GCA_002194235.1_ASM219423v1	-	FC2271
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.16984	28.3	-	FAJB01	312	3858	3680	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664320	GCA_900008785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/785/GCA_900008785.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.20093	45.2	-	MIQL01	119	4966	4791	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368225	GCA_001726185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/185/GCA_001726185.1_ASM172618v1	-	GCSL_R8
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.91839	56.9	-	LEZN01	9	6018	5728	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280370	GCA_001033255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/255/GCA_001033255.1_Kleb_pneu_CHS230_V1	-	CHS230
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.79238	37.5	-	JVPG01	140	2798	2696	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197418	GCA_001054705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/705/GCA_001054705.1_ASM105470v1	26230489	226_EFLS
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.93736	37.9	-	FXKC01	146	3046	2851	4/26/17	5/6/17	Contig	SC	SAMEA3893664	GCA_900179805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/805/GCA_900179805.1_19789_7_1	-	VREN3647
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.70973	67.3	-	CGAB01	852	3743	2910	3/15/15	3/26/17	Scaffold	SC	SAMEA1931344	GCA_001330995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/995/GCA_001330995.1_5463_3_11	-	B162
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.72645	31.2	-	FBKV01	72	1765	1638	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683347	GCA_001493835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/835/GCA_001493835.1_H091320798	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.92285	55.4	-	FKFO01	45	4835	4593	4/6/16	3/28/17	Scaffold	SC	SAMEA2273488	GCA_900077505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/505/GCA_900077505.1_12045_5_64	-	e638
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98315	64.2	-	FVUE01	11	4999	4881	3/10/17	3/18/17	Contig	SC	SAMEA2070820	GCA_900139585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/585/GCA_900139585.1_10625_5_47	-	132
Pseudomonas sp. Irchel s3a18	2009053	PRJEB21289	398218	Proteobacteria	Gammaproteobacteria	5.49411	60.4	-	FYDV01	43	5059	4849	8/15/17	8/28/17	Scaffold	UNIVERSITY OF ZUERICH	SAMEA104128661	GCA_900187535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/535/GCA_900187535.1_s3a18	-	-
Pseudomonas sp. Irchel 3F3	2009000	PRJEB21289	398218	Proteobacteria	Gammaproteobacteria	5.96765	62.1	-	FYDS01	30	5529	5313	8/15/17	8/28/17	Scaffold	UNIVERSITY OF ZUERICH	SAMEA104128679	GCA_900187545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/545/GCA_900187545.1_3F3	-	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98212	64.2	-	FVUO01	14	4993	4873	3/10/17	3/18/17	Contig	SC	SAMEA1966274	GCA_900139605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/605/GCA_900139605.1_10625_5_54	-	139
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.66575	55.7	-	FKFN01	48	4552	4275	4/6/16	3/28/17	Scaffold	SC	SAMEA2273204	GCA_900077515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/515/GCA_900077515.1_12045_4_75	-	e633
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.58294	31.7	-	FBKP01	25	1587	1530	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683340	GCA_001493855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/855/GCA_001493855.1_H065100506	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.68905	67.6	-	CGAJ01	842	3746	2984	3/15/15	3/26/17	Scaffold	SC	SAMEA1931346	GCA_001331015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/015/GCA_001331015.1_5463_6_1	-	B043
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.17361	37.4	-	FXJN01	210	3300	3069	4/26/17	5/6/17	Contig	SC	SAMEA3893605	GCA_900179815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/815/GCA_900179815.1_19789_6_84	-	VREN1814
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.12153	37.3	-	JVOF01	95	3213	3072	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197445	GCA_001054775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/775/GCA_001054775.1_ASM105477v1	26230489	254_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.7275	56.9	-	LEZO01	8	5821	5549	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280371	GCA_001033285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/285/GCA_001033285.1_Kleb_pneu_CHS231_V1	-	CHS231
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.0528	45.3	-	MIQK01	138	4805	4626	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368224	GCA_001726195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/195/GCA_001726195.1_ASM172619v1	-	GCSL_R7
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.15869	28.7	-	FALR01	659	3796	3627	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664388	GCA_900008795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/795/GCA_900008795.1_Peptoclostridium_difficile	-	-
Vibrio cholerae O139	45888	PRJNA385889	385889	Proteobacteria	Gammaproteobacteria	4.01474	47.5	-	NGQW01	93	3843	3594	6/14/17	6/19/17	Contig	Christian Medical College	SAMN06920124	GCA_002194245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/245/GCA_002194245.1_ASM219424v1	-	FC1384
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.03896	68.2	-	LXDM01	232	7337	6781	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208790	GCA_001980775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/775/GCA_001980775.1_ASM198077v1	-	402a
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.34931	50.8	-	CXDY01	390	4618	4129	7/16/15	2/24/17	Scaffold	SC	SAMEA954657	GCA_001254975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/975/GCA_001254975.1_5417_1_4	-	20060018_1361370
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.34384	38.2	-	CCZQ01	28	3043	2906	10/21/14	3/25/17	Scaffold	ROSLIN	SAMEA2627161	GCA_000823685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/685/GCA_000823685.1_12_5223	-	12_5223
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.02598	41.3	-	FIGX01	23	2034	1931	2/10/16	3/19/17	Contig	SC	SAMEA1316670	GCA_900054545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/545/GCA_900054545.1_7114_5_5	-	LSS5
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	1.95223	35.2	-	CDDG01	80	1963	1862	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780142	GCA_001398455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/455/GCA_001398455.1_Child1	-	Child1
Acinetobacter baumannii 662545-1347	1310582	PRJNA194658	194658	Proteobacteria	Gammaproteobacteria	3.98683	39.3	-	JEZR01	472	3991	3669	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02371050	GCA_000581675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/675/GCA_000581675.1_ASM58167v1	-	662545-1347
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.3602	66.3	-	JTZX01	85	6101	5909	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105408	GCA_000797225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/225/GCA_000797225.1_AZPAE12417	25367914	AZPAE12417
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11609	51.8	-	FEPW01	63	2458	2128	2/9/16	3/19/17	Scaffold	SC	SAMEA2674401	GCA_900021965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/965/GCA_900021965.1_14324_5_64	-	2842STDY5881597
Helicobacter pylori	210	PRJNA287308	287308	Proteobacteria	delta/epsilon subdivisions	1.63339	38.6	-	LFKN01	24	1623	1445	7/31/15	3/26/17	Contig	University of Malaya-University of Western Australia	SAMN03780459	GCA_001189815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/815/GCA_001189815.1_ASM118981v1	-	UM196
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12329	39.6	-	CMSY01	62	2361	2112	3/23/15	3/4/17	Contig	SC	SAMEA2061950	GCA_001095925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/925/GCA_001095925.1_9803_8_9	-	14
Escherichia coli O104:H4 str. 04-8351	1048265	PRJNA68211	68211	Proteobacteria	Gammaproteobacteria	5.41545	50.6	-	AFRL01	7	5727	5342	10/31/11	2/22/17	Scaffold	Broad Institute	SAMN00715301	GCA_000235245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/245/GCA_000235245.1_Esch_coli_04-8351_V2	22315421	Apr-51
Mycobacterium tuberculosis M1213	1448635	PRJNA235646	235646	Terrabacteria group	Actinobacteria	4.41537	65.6	-	JKPF01	5	4279	4097	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598981	GCA_000654695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/695/GCA_000654695.1_Myco_tube_M1213_V1	-	M1213
Listeria monocytogenes	1639	PRJNA246743	246743	Terrabacteria group	Firmicutes	2.94915	37.8	-	JNGL01	37	2982	2938	12/14/15	3/1/17	Contig	Centers for Disease Control and Prevention	SAMN02769893	GCA_001466075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/075/GCA_001466075.1_ASM146607v1	-	J0221
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.59377	30.4	-	CURG01	12	1655	1558	3/31/15	3/18/17	Contig	SC	SAMEA1010532	GCA_001236805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/805/GCA_001236805.1_7092_1_64	-	OXC6511
Salmonella enterica subsp. enterica serovar Enteritidis str. SA20100349	1412482	PRJNA219482	219482	Proteobacteria	Gammaproteobacteria	4.68583	52.2	chromosome:NZ_CP007361.1/CP007361.2	-	1	4713	4445	4/2/14	3/1/17	Chromosome	LFZ	SAMN02384203	GCA_000968795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/795/GCA_000968795.2_ASM96879v2	24786953	SA20100349
Staphylococcus aureus M0686	1388460	PRJNA216631	216631	Terrabacteria group	Firmicutes	2.83199	32.8	-	JBCR01	33	2964	2827	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325584	GCA_000528475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/475/GCA_000528475.1_Stap_aure_M0686_V1	-	M0686
Staphylococcus aureus M0689	1388461	PRJNA216632	216632	Terrabacteria group	Firmicutes	2.86172	32.8	-	JBCQ01	47	3018	2853	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325585	GCA_000528495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/495/GCA_000528495.1_Stap_aure_M0689_V1	-	M0689
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJNA287753	287753	Proteobacteria	Gammaproteobacteria	4.58523	52.2	chromosome:NZ_CP011967.1/CP011967.1	-	1	4676	4313	7/2/15	2/27/17	Chromosome	Third Military Medical University	SAMN03786808	GCA_001045395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/395/GCA_001045395.1_ASM104539v1	-	CMCC50093
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64926	30.5	-	CUQG01	12	1716	1620	3/31/15	3/18/17	Contig	SC	SAMEA1010317	GCA_001236845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/845/GCA_001236845.1_7092_1_40	-	OXC6487
Listeria monocytogenes	1639	PRJNA246743	246743	Terrabacteria group	Firmicutes	2.88855	37.8	-	JNGM01	35	2889	2844	12/14/15	3/1/17	Contig	Centers for Disease Control and Prevention	SAMN02769894	GCA_001466095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/095/GCA_001466095.1_ASM146609v1	-	J0847
Mycobacterium tuberculosis M1215	1448636	PRJNA235647	235647	Terrabacteria group	Actinobacteria	4.41779	65.6	-	JKPE01	9	4271	4099	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598982	GCA_000654715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/715/GCA_000654715.1_Myco_tube_M1215_V1	-	M1215
Escherichia coli O104:H4 str. C236-11	1048256	PRJNA68155	68155	Proteobacteria	Gammaproteobacteria	5.40747	50.6	-	AFRI01	6	5725	5321	10/31/11	2/22/17	Scaffold	Broad Institute	SAMN00715300	GCA_000235265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/265/GCA_000235265.1_Esch_coli_C236-11_V2	22315421	C236-11
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.99981	39.7	-	CNXR02	163	2133	1958	3/22/15	3/11/17	Contig	SC	SAMEA1032627	GCA_001095985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/985/GCA_001095985.2_7001_3_5	-	R34-3139
Helicobacter pylori	210	PRJNA287617	287617	Proteobacteria	delta/epsilon subdivisions	1.63323	39.5	-	LFLE01	58	1628	1449	7/31/15	3/26/17	Contig	University of Malaya-University of Western Australia	SAMN03784711	GCA_001189835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/835/GCA_001189835.1_ASM118983v1	-	UM147
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12014	51.7	-	FESA01	86	2488	2169	2/9/16	3/19/17	Scaffold	SC	SAMEA2674043	GCA_900021975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/975/GCA_900021975.1_14355_4_91	-	2842STDY5881048
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.7375	66.2	-	JTZW01	106	6467	6219	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105409	GCA_000797245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/245/GCA_000797245.1_AZPAE12418	25367914	AZPAE12418
Acinetobacter baumannii 532413	1310577	PRJNA194653	194653	Proteobacteria	Gammaproteobacteria	4.12768	39	-	JEZO01	95	4091	3853	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02371045	GCA_000581695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/695/GCA_000581695.1_ASM58169v1	-	532413
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.05094	35.4	-	CDDJ01	93	2076	1973	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780143	GCA_001398475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/475/GCA_001398475.1_Mother2	-	Mother2
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.02616	41.2	-	FIGY01	24	2043	1923	2/10/16	3/19/17	Contig	SC	SAMEA1316610	GCA_900054555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/555/GCA_900054555.1_7114_5_50	-	LSS50
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.39106	38.2	-	CCZR01	29	3095	2955	10/21/14	3/25/17	Scaffold	ROSLIN	SAMEA2627162	GCA_000823705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/705/GCA_000823705.1_12_5251	-	12_5251
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.74299	50.8	-	CXKX01	392	5371	4566	7/17/15	2/24/17	Scaffold	SC	SAMEA2003432	GCA_001255015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/015/GCA_001255015.1_8290_4_6	-	94817
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.17237	68.2	-	LXDN01	177	7432	6890	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208791	GCA_001980815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/815/GCA_001980815.1_ASM198081v1	-	577ci
Vibrio cholerae O139	45888	PRJNA385889	385889	Proteobacteria	Gammaproteobacteria	3.99911	47.5	-	NGQX01	81	3822	3618	6/14/17	6/19/17	Contig	Christian Medical College	SAMN06920123	GCA_002194265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/265/GCA_002194265.1_ASM219426v1	-	FC1341
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.24467	29.1	-	FANM01	1405	3951	3708	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664434	GCA_900008815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/815/GCA_900008815.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.0519	45.2	-	MIQN01	116	4789	4592	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368226	GCA_001726245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/245/GCA_001726245.1_ASM172624v1	-	GCSL_R12
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.85081	57	-	LEZP01	8	5953	5679	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280372	GCA_001033295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/295/GCA_001033295.1_Kleb_pneu_CHS232_V1	-	CHS232
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.98897	37.3	-	JVOA01	145	3070	2943	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197450	GCA_001054785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/785/GCA_001054785.1_ASM105478v1	26230489	258.rep2_EFLS
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.17582	37.4	-	FXJI01	217	3308	3086	4/26/17	5/6/17	Contig	SC	SAMEA3893607	GCA_900179825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/825/GCA_900179825.1_19789_6_86	-	VREN1834
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.68621	67.4	-	CFWZ01	834	3742	2920	3/15/15	3/26/17	Scaffold	SC	SAMEA1931347	GCA_001331035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/035/GCA_001331035.1_5463_6_7	-	B109
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.79015	31.2	-	FBGO01	43	1886	1784	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683233	GCA_001493875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/875/GCA_001493875.1_BRISLC31-1	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.2209	54.6	-	FKFS01	86	5172	4886	4/6/16	3/28/17	Scaffold	SC	SAMEA2273215	GCA_900077525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/525/GCA_900077525.1_12045_4_85	-	e659
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.08772	64.1	-	FVUN01	20	5113	4979	3/10/17	3/18/17	Contig	SC	SAMEA2070415	GCA_900139615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/615/GCA_900139615.1_10625_5_55	-	140
Pseudomonas sp. Irchel s3f19	2009146	PRJEB21289	398218	Proteobacteria	Gammaproteobacteria	5.97082	62.6	-	FYDW01	32	5432	5239	8/15/17	8/28/17	Scaffold	UNIVERSITY OF ZUERICH	SAMEA104128669	GCA_900187555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/555/GCA_900187555.1_s3f19	-	-
Pseudomonas sp. Irchel 3A7	2008913	PRJEB21289	398218	Proteobacteria	Gammaproteobacteria	6.52009	59.5	-	FYED01	29	6032	5828	8/15/17	8/28/17	Scaffold	UNIVERSITY OF ZUERICH	SAMEA104128675	GCA_900187565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/565/GCA_900187565.1_3A7	-	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.02565	64.2	-	FVUM01	11	5042	4918	3/10/17	3/18/17	Contig	SC	SAMEA2070419	GCA_900139625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/625/GCA_900139625.1_10625_5_67	-	152
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.70514	55	-	FKFP01	14	4526	4359	4/6/16	3/28/17	Scaffold	SC	SAMEA2273205	GCA_900077535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/535/GCA_900077535.1_12045_4_76	-	e647
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65995	31.4	-	FAYU01	20	1719	1622	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683042	GCA_001493895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/895/GCA_001493895.1_EC4060	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.82867	67.9	-	CIGO01	302	3687	3290	4/21/15	3/26/17	Scaffold	SC	SAMEA1931348	GCA_001331055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/055/GCA_001331055.1_5463_6_12	-	B220
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.94147	37.9	-	FXJH01	147	3048	2845	4/26/17	5/6/17	Contig	SC	SAMEA3893666	GCA_900179875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/875/GCA_900179875.1_19789_7_2	-	VREN3648
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.98429	37.3	-	JVIY01	133	3068	2945	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197582	GCA_001055025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/025/GCA_001055025.1_ASM105502v1	26230489	391_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.74512	57.1	-	LEZQ01	16	5893	5634	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280374	GCA_001033305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/305/GCA_001033305.1_Kleb_pneu_CHS234_V1	-	CHS234
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.12213	45.2	-	MIQO01	161	4868	4681	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368227	GCA_001726255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/255/GCA_001726255.1_ASM172625v1	-	GCSL_R13
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.25256	28.9	-	FAIJ01	1648	3940	3715	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664302	GCA_900009235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/235/GCA_900009235.1_Peptoclostridium_difficile	-	-
Vibrio cholerae O139	45888	PRJNA385889	385889	Proteobacteria	Gammaproteobacteria	3.96061	47.5	-	NGQZ01	110	3802	3545	6/14/17	6/19/17	Contig	Christian Medical College	SAMN06920121	GCA_002194295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/295/GCA_002194295.1_ASM219429v1	-	FC1105
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.15034	68.2	-	LXDP01	445	7532	6809	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208793	GCA_001980835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/835/GCA_001980835.1_ASM198083v1	-	577d
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.68416	50.7	-	CWYG01	378	5248	4478	7/16/15	2/24/17	Scaffold	SC	SAMEA2445707	GCA_001255035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/035/GCA_001255035.1_12971_8_26	-	H092760241
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.38895	38.2	-	CDDY01	29	3091	2951	11/4/14	3/25/17	Scaffold	ROSLIN	SAMEA2627163	GCA_000823725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/725/GCA_000823725.1_12_5329	-	12_5329
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.02855	41.2	-	FIHC01	22	2034	1927	2/10/16	3/19/17	Contig	SC	SAMEA1316607	GCA_900054565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/565/GCA_900054565.1_7114_5_51	-	LSS51
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.03964	35.3	-	CDBM01	58	2063	1975	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780144	GCA_001398495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/495/GCA_001398495.1_Child2	-	Child2
Acinetobacter baumannii 1277411	1310655	PRJNA194731	194731	Proteobacteria	Gammaproteobacteria	4.22333	39.1	-	JEXL01	289	4257	3928	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02384921	GCA_000581735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/735/GCA_000581735.1_ASM58173v1	-	1277411
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.29077	66.5	-	JTZV01	89	5973	5786	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105410	GCA_000797265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/265/GCA_000797265.1_AZPAE12419	25367914	AZPAE12419
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.22037	51.6	-	FEUH01	87	2612	2229	2/9/16	3/21/17	Scaffold	SC	SAMEA2673857	GCA_900021985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/985/GCA_900021985.1_14355_6_34	-	2842STDY5881183
Helicobacter pylori	210	PRJNA287081	287081	Proteobacteria	delta/epsilon subdivisions	1.6336	39	-	LFIS01	16	1623	1454	8/5/15	3/26/17	Contig	University of Malaya-University of Western Australia	SAMN03776086	GCA_001248015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/015/GCA_001248015.1_ASM124801v1	-	UM152
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.99936	39.7	-	CNRY02	138	2135	1949	3/23/15	3/5/17	Contig	SC	SAMEA1032431	GCA_001096005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/005/GCA_001096005.2_6999_2_23	-	R34-3229
Escherichia coli O104:H4 str. C227-11	1048254	PRJNA68153	68153	Proteobacteria	Gammaproteobacteria	5.41363	50.6	-	AFRH01	11	5713	5296	10/31/11	2/22/17	Scaffold	Broad Institute	SAMN00715316	GCA_000235285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/235/285/GCA_000235285.1_Esch_coli_C227-11_V2	22315421	C227-11
Mycobacterium tuberculosis M1221	1448637	PRJNA235648	235648	Terrabacteria group	Actinobacteria	4.42431	65.6	-	JKPD01	74	4319	4101	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598983	GCA_000654735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/735/GCA_000654735.1_Myco_tube_M1221_V1	-	M1221
Listeria monocytogenes	1639	PRJNA246743	246743	Terrabacteria group	Firmicutes	2.90033	37.8	-	JNGN01	28	2924	2877	12/14/15	3/1/17	Contig	Centers for Disease Control and Prevention	SAMN02769895	GCA_001466115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/115/GCA_001466115.1_ASM146611v1	-	L1023
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64593	30.4	-	CUHO01	12	1732	1637	3/31/15	3/18/17	Contig	SC	SAMEA1010299	GCA_001236865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/865/GCA_001236865.1_7038_3_10	-	OXC6259
Salmonella enterica subsp. enterica serovar Ouakam	1243585	PRJNA288309	288309	Proteobacteria	Gammaproteobacteria	5.19817	52.4916	chromosome:NZ_CP012038.1/CP012038.1; plasmid pDM01:NZ_CP012039.1/CP012039.1	-	2	5299	4874	7/14/15	2/27/17	Chromosome	University of Tulsa	SAMN03798087	GCA_001077835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/835/GCA_001077835.1_ASM107783v1	26798110	GNT-01
Staphylococcus aureus M0690	1388462	PRJNA216633	216633	Terrabacteria group	Firmicutes	2.77411	32.8	-	JBCP01	52	2857	2691	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325586	GCA_000528515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/515/GCA_000528515.1_Stap_aure_M0690_V1	-	M0690
Staphylococcus aureus M0693	1388464	PRJNA216635	216635	Terrabacteria group	Firmicutes	2.88166	32.9	-	JBCN01	57	3059	2883	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325588	GCA_000528535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/535/GCA_000528535.1_Stap_aure_M0693_V1	-	M0693
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA227206	227206	Proteobacteria	Gammaproteobacteria	4.88269	52.1	chromosome:NZ_CP011233.1/CP011233.1	-	1	4972	4725	3/11/16	3/1/17	Chromosome	"Department of Microbiology, Moyne Institute of Preventive Medicine"	SAMN03448627	GCA_001587055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/055/GCA_001587055.1_ASM158705v1	26631971	SL1344RX
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66159	30.4	-	CUUN01	18	1753	1655	3/31/15	3/18/17	Contig	SC	SAMEA1400956	GCA_001236905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/905/GCA_001236905.1_7213_3_57	-	OXC6600
Listeria monocytogenes	1639	PRJNA246743	246743	Terrabacteria group	Firmicutes	2.95424	37.8	-	JNGO01	63	3018	2928	12/14/15	3/1/17	Contig	Centers for Disease Control and Prevention	SAMN02769896	GCA_001466135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/135/GCA_001466135.1_ASM146613v1	-	2012-L5240
Mycobacterium tuberculosis M1232	1448638	PRJNA235649	235649	Terrabacteria group	Actinobacteria	4.42291	65.6	-	JKPC01	6	4278	4101	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598984	GCA_000654755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/755/GCA_000654755.1_Myco_tube_M1232_V1	-	M1232
Escherichia coli H397	656398	PRJNA39001	39001	Proteobacteria	Gammaproteobacteria	5.2426	50.6	-	AEXH01	39	5546	5143	1/10/12	2/22/17	Scaffold	Broad Institute	SAMN02596700	GCA_000241975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/975/GCA_000241975.1_Esch_coli_H397_V1	-	H397
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12076	39.7	-	CKYP01	47	2285	1984	3/21/15	3/15/17	Contig	SC	SAMEA1025303	GCA_001096065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/065/GCA_001096065.1_6830_3_17	-	SMRU1649
Helicobacter pylori	210	PRJNA287064	287064	Proteobacteria	delta/epsilon subdivisions	1.65145	38.9	-	LFIR01	20	1621	1453	8/5/15	3/26/17	Contig	University of Malaya-University of Western Australia	SAMN03776040	GCA_001248025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/025/GCA_001248025.1_ASM124802v1	-	UM165
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.1725	51.5	-	FEVM01	78	2537	2163	2/9/16	3/21/17	Scaffold	SC	SAMEA2674069	GCA_900021995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/995/GCA_900021995.1_14324_4_17	-	2842STDY5881262
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.28366	66.4	-	JTZU01	93	5974	5771	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105411	GCA_000797285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/285/GCA_000797285.1_AZPAE12420	25367914	AZPAE12420
Acinetobacter baumannii 1096934	1310657	PRJNA194733	194733	Proteobacteria	Gammaproteobacteria	4.33004	39	-	JEXM01	235	4274	3960	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02384923	GCA_000581755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/755/GCA_000581755.1_ASM58175v1	-	1096934
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.02517	35.4	-	CDBX01	61	2047	1959	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780145	GCA_001398515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/515/GCA_001398515.1_Mother3	-	Mother3
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.03264	41.2	-	FIJR01	28	2022	1923	2/10/16	3/19/17	Contig	SC	SAMEA1316578	GCA_900054575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/575/GCA_900054575.1_7054_7_30	-	SS1025
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.38818	38.2	-	CCZS01	35	3089	2951	10/21/14	3/25/17	Scaffold	ROSLIN	SAMEA2627164	GCA_000823745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/745/GCA_000823745.1_12_5383	-	12_5383
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.65896	50.8	-	CXHT01	382	5271	4465	7/16/15	2/24/17	Scaffold	SC	SAMEA2003849	GCA_001255055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/055/GCA_001255055.1_8289_7_49	-	75887
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.17777	68	-	LXDQ01	217	7499	6933	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208794	GCA_001980845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/845/GCA_001980845.1_ASM198084v1	-	858ai
Vibrio cholerae O139	45888	PRJNA385889	385889	Proteobacteria	Gammaproteobacteria	4.04341	47.5	-	NGQV01	78	3884	3655	6/14/17	6/19/17	Contig	Christian Medical College	SAMN06920125	GCA_002194305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/305/GCA_002194305.1_ASM219430v1	-	FC1817
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.12137	28.6	-	FANP01	612	3757	3633	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664438	GCA_900009255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/255/GCA_900009255.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.0876	45.3	-	MIQJ01	107	4834	4667	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368223	GCA_001726265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/265/GCA_001726265.1_ASM172626v1	-	GCSL_R6
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.6382	57.2	-	LEZR01	4	5692	5444	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280375	GCA_001033335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/335/GCA_001033335.1_Kleb_pneu_CHS235_V1	-	CHS235
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.95914	37.3	-	JVIK01	103	3041	2913	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197596	GCA_001055055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/055/GCA_001055055.1_ASM105505v1	26230489	406_EFLS
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.188	37.4	-	FXJQ01	217	3324	3086	4/26/17	5/6/17	Contig	SC	SAMEA3893608	GCA_900179955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/955/GCA_900179955.1_19789_6_87	-	VREN1836
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.68128	67.3	-	CHFN01	808	3728	2882	4/21/15	3/26/17	Scaffold	SC	SAMEA1931720	GCA_001331135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/135/GCA_001331135.1_5463_7_10	-	B236
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.61676	31.6	-	FBLD01	45	1639	1572	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683355	GCA_001493915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/915/GCA_001493915.1_H085160749	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.07793	55.3	-	FKFQ01	81	5060	4791	4/6/16	3/28/17	Scaffold	SC	SAMEA2273206	GCA_900077545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/545/GCA_900077545.1_12045_4_77	-	e657
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.12804	64.2	-	FVUP01	10	5209	5049	3/10/17	3/18/17	Contig	SC	SAMEA2070709	GCA_900139645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/645/GCA_900139645.1_10625_5_8	-	93
Pseudomonas sp. Irchel 3A5	2008911	PRJEB21289	398218	Proteobacteria	Gammaproteobacteria	6.42897	57.1	-	FYDU01	34	5877	5694	8/15/17	8/28/17	Scaffold	UNIVERSITY OF ZUERICH	SAMEA104128673	GCA_900187575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/575/GCA_900187575.1_3A5	-	-
Pseudomonas sp. Irchel 3E19	2008981	PRJEB21289	398218	Proteobacteria	Gammaproteobacteria	6.46439	59.1	-	FYDT01	108	5913	5559	8/15/17	8/28/17	Scaffold	UNIVERSITY OF ZUERICH	SAMEA104128677	GCA_900187585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/585/GCA_900187585.1_3E19	-	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.0251	64.2	-	FVUL01	9	5044	4918	3/10/17	3/18/17	Contig	SC	SAMEA2070826	GCA_900139655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/655/GCA_900139655.1_10625_5_71	-	156
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.00561	55	-	FKFR01	39	4870	4657	4/6/16	3/28/17	Scaffold	SC	SAMEA2273480	GCA_900077555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/555/GCA_900077555.1_12045_5_59	-	e660
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65964	31.4	-	FAZT01	19	1726	1633	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683059	GCA_001493935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/935/GCA_001493935.1_EC3370	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.84651	67.9	-	CFYF01	295	3709	3303	3/15/15	3/26/17	Scaffold	SC	SAMEA1931748	GCA_001331155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/155/GCA_001331155.1_5463_3_12	-	B152
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.93527	37.9	-	FXJX01	144	3035	2851	4/26/17	5/6/17	Contig	SC	SAMEA3893683	GCA_900180005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/005/GCA_900180005.1_19789_7_10	-	VREN3686
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.26723	37.1	-	JVGB01	101	3415	3238	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197657	GCA_001055135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/135/GCA_001055135.1_ASM105513v1	26230489	463_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.84464	57	-	LEZS01	8	5941	5664	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280376	GCA_001033365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/365/GCA_001033365.1_Kleb_pneu_CHS236_V1	-	CHS236
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.01097	45.3	-	MIQQ01	100	4717	4564	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368229	GCA_001726275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/275/GCA_001726275.1_ASM172627v1	-	GCSL_R17
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.20293	28.7	-	CZYJ01	1501	3742	3585	3/31/16	4/10/17	Contig	UNIVERSITE LAVAL	SAMEA3664041	GCA_900009395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/395/GCA_900009395.1_Peptoclostridium_difficile	-	-
Vibrio cholerae O139	45888	PRJNA385889	385889	Proteobacteria	Gammaproteobacteria	4.00341	47.5	-	NGQY01	97	3829	3609	6/14/17	6/19/17	Contig	Christian Medical College	SAMN06920122	GCA_002194335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/335/GCA_002194335.1_ASM219433v1	-	FC1225
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.22282	68.1	-	LXDR01	215	7548	6977	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208795	GCA_001980885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/885/GCA_001980885.1_ASM198088v1	-	858d
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.72908	50.7	-	CWZO01	391	5280	4566	7/16/15	2/24/17	Scaffold	SC	SAMEA2445754	GCA_001255075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/075/GCA_001255075.1_12971_8_63	-	H132940676
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.3918	38.2	-	CCZT01	38	3100	2953	10/21/14	3/25/17	Scaffold	ROSLIN	SAMEA2627165	GCA_000823765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/765/GCA_000823765.1_12_5414	-	12_5414
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	1.96115	41.3	-	FILY01	26	1958	1870	2/10/16	3/19/17	Contig	SC	SAMEA1316664	GCA_900054585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/585/GCA_900054585.1_7054_7_74	-	SS994
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.02521	35.4	-	CDDM01	60	2050	1960	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780146	GCA_001398535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/535/GCA_001398535.1_Child3	-	Child3
Acinetobacter baumannii 1106579	1310659	PRJNA194735	194735	Proteobacteria	Gammaproteobacteria	3.99553	39	-	JEXN01	260	4181	3557	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02384924	GCA_000581775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/775/GCA_000581775.1_ASM58177v1	-	1106579
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.24389	66.4	-	JTZT01	105	5962	5742	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105412	GCA_000797305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/305/GCA_000797305.1_AZPAE12421	25367914	AZPAE12421
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11837	51.7	-	FEVR01	54	2477	2144	2/9/16	3/19/17	Scaffold	SC	SAMEA2674084	GCA_900022005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/005/GCA_900022005.1_14324_4_32	-	2842STDY5881277
Helicobacter pylori	210	PRJNA287109	287109	Proteobacteria	delta/epsilon subdivisions	1.59176	39.2	-	LFIT01	14	1573	1414	8/5/15	3/26/17	Contig	University of Malaya-University of Western Australia	SAMN03776166	GCA_001248035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/035/GCA_001248035.1_ASM124803v1	-	UM300
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09581	39.6	-	CNUS02	152	2270	2066	3/23/15	3/5/17	Contig	SC	SAMEA1032668	GCA_001096085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/085/GCA_001096085.2_6999_6_20	-	312034
Escherichia coli E101	550685	PRJNA38935	38935	Proteobacteria	Gammaproteobacteria	5.1819	50.4	-	AEXG01	95	5388	4959	1/10/12	2/22/17	Scaffold	Broad Institute	SAMN02596699	GCA_000241995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/995/GCA_000241995.1_Esch_coli_E101_V1	-	E101
Mycobacterium tuberculosis M1233	1448639	PRJNA235650	235650	Terrabacteria group	Actinobacteria	4.41976	65.6	-	JKPB01	67	4322	4110	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598985	GCA_000654775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/775/GCA_000654775.1_Myco_tube_M1233_V1	-	M1233
Listeria monocytogenes	1639	PRJNA246743	246743	Terrabacteria group	Firmicutes	2.95693	37.8	-	JNGP01	68	3016	2928	12/14/15	3/1/17	Contig	Centers for Disease Control and Prevention	SAMN02769897	GCA_001466165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/165/GCA_001466165.1_ASM146616v1	-	2012-L5322
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64309	30.5	-	CUOQ01	16	1727	1648	3/31/15	3/18/17	Contig	SC	SAMEA1010390	GCA_001236945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/945/GCA_001236945.1_7065_7_89	-	OXC6437
Salmonella enterica subsp. enterica	59201	PRJNA380913	380913	Proteobacteria	Gammaproteobacteria	4.48561	52.4	chromosome:NZ_CP020718.1/CP020718.1	-	1	4526	4209	4/18/17	4/21/17	Chromosome	Centers for Disease Control and Prevention	SAMN06651530	GCA_002094915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/915/GCA_002094915.1_ASM209491v1	-	2012K-0678
Staphylococcus aureus M0697	1388466	PRJNA216637	216637	Terrabacteria group	Firmicutes	2.90864	32.8	-	JBCL01	59	3082	2901	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325590	GCA_000528555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/555/GCA_000528555.1_Stap_aure_M0697_V1	-	M0697
Staphylococcus aureus M0698	1388467	PRJNA216638	216638	Terrabacteria group	Firmicutes	2.88964	32.9	-	JBCK01	69	3061	2873	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325591	GCA_000528575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/575/GCA_000528575.1_Stap_aure_M0698_V1	-	M0698
Salmonella enterica subsp. enterica serovar Choleraesuis str. SCSA50	904139	PRJNA53347	53347	Proteobacteria	Gammaproteobacteria	4.78994	52.199	chromosome:NZ_CM001062.1/CM001062.1; plasmid pSCV50:NZ_CM001063.1/CM001063.1	AEJH01	2	4918	4525	2/1/11	2/26/17	Chromosome	Ark Genomics	SAMN02415256	GCA_000187565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/565/GCA_000187565.1_ASM18756v1	21478351	A50
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.73947	30.4	-	CUKJ01	15	1843	1727	3/31/15	3/18/17	Contig	SC	SAMEA1010266	GCA_001237005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/005/GCA_001237005.1_7038_3_73	-	OXC6323
Listeria monocytogenes	1639	PRJNA246743	246743	Terrabacteria group	Firmicutes	2.86282	37.9	-	JNGQ01	31	2860	2813	12/14/15	3/1/17	Contig	Centers for Disease Control and Prevention	SAMN02769900	GCA_001466215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/215/GCA_001466215.1_ASM146621v1	-	L1118
Mycobacterium tuberculosis M1236	1448640	PRJNA235651	235651	Terrabacteria group	Actinobacteria	4.41778	65.6	-	JKPA01	74	4323	4097	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598986	GCA_000654795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/795/GCA_000654795.1_Myco_tube_M1236_V1	-	M1236
Escherichia coli B093	550674	PRJNA38907	38907	Proteobacteria	Gammaproteobacteria	5.20535	50.6	-	AEXF01	104	5388	4951	1/10/12	2/22/17	Scaffold	Broad Institute	SAMN02596698	GCA_000242015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/015/GCA_000242015.1_Esch_coli_B093_V1	-	B093
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.11443	39.5	-	CMTD01	70	2308	2061	3/23/15	3/4/17	Contig	SC	SAMEA1022805	GCA_001096145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/145/GCA_001096145.1_5737_1_8	-	368
Helicobacter pylori	210	PRJNA287195	287195	Proteobacteria	delta/epsilon subdivisions	1.57647	39.1	-	LFIU01	26	1575	1398	8/5/15	3/26/17	Contig	University of Malaya-University of Western Australia	SAMN03777286	GCA_001248105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/105/GCA_001248105.1_ASM124810v1	-	UM408
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.10389	51.7	-	FEZV01	84	2460	2118	2/9/16	3/21/17	Scaffold	SC	SAMEA2674218	GCA_900022015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/015/GCA_900022015.1_14555_5_39	-	2842STDY5881380
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.33113	66.5	-	JTZS01	119	6032	5590	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105413	GCA_000797325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/325/GCA_000797325.1_AZPAE12422	25367914	AZPAE12422
Acinetobacter baumannii 1440750	1310663	PRJNA194739	194739	Proteobacteria	Gammaproteobacteria	4.21241	38.8	-	JEXQ01	399	4303	3932	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02384927	GCA_000581795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/795/GCA_000581795.1_ASM58179v1	-	1440750
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.04566	35.3	-	CDDX01	87	2062	1953	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780147	GCA_001398555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/555/GCA_001398555.1_Mother4	-	Mother4
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05799	41.1	-	FIRH01	20	2076	1967	2/10/16	3/19/17	Contig	SC	SAMEA1566056	GCA_900054595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/595/GCA_900054595.1_8525_5_72	-	VS3466
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.38428	38.2	-	CCZU01	74	3132	2924	10/21/14	3/25/17	Scaffold	ROSLIN	SAMEA2627166	GCA_000823785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/785/GCA_000823785.1_12_5415	-	12_5415
Shigella sonnei	624	PRJEB2460	204320	Proteobacteria	Gammaproteobacteria	4.89155	50.6	-	CXFJ01	406	5403	4751	7/16/15	2/24/17	Scaffold	SC	SAMEA1027706	GCA_001255095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/095/GCA_001255095.1_6350_1_13	-	sh07-2224
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.01957	68.3	-	LXDS01	233	7329	6763	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208796	GCA_001980895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/895/GCA_001980895.1_ASM198089v1	-	942a
Vibrio cholerae	666	PRJNA389223	389223	Proteobacteria	Gammaproteobacteria	3.96138	47.6	-	NIFH01	159	3747	3559	6/15/17	6/19/17	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN07192612	GCA_002196055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/055/GCA_002196055.1_ASM219605v1	-	P-18748
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.20803	28.5	-	CZYI01	214	3952	3823	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664042	GCA_900009405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/405/GCA_900009405.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	4.94637	45.4	-	MIQT01	104	4713	4534	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368232	GCA_001726325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/325/GCA_001726325.1_ASM172632v1	-	GCSL_R29
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.84079	57	-	LEZT01	15	5955	5675	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280377	GCA_001033375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/375/GCA_001033375.1_Kleb_pneu_CHS237_V1	-	CHS237
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.01627	37.3	-	JVBG01	176	3075	2922	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197782	GCA_001055395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/395/GCA_001055395.1_ASM105539v1	26230489	581_EFLS
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.93532	37.9	-	FXKB01	152	3037	2847	4/26/17	5/6/17	Contig	SC	SAMEA3893671	GCA_900180055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/055/GCA_900180055.1_19789_7_4	-	VREN3655
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.69657	67.3	-	CIAX01	845	3709	2904	4/21/15	3/26/17	Scaffold	SC	SAMEA1931804	GCA_001331175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/175/GCA_001331175.1_5463_7_7	-	B157
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.63823	31.4	-	FBLN01	16	1690	1600	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683364	GCA_001493955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/955/GCA_001493955.1_p546C	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.02666	55.4	-	FKFU01	41	4947	4720	4/6/16	3/28/17	Scaffold	SC	SAMEA2273124	GCA_900077565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/565/GCA_900077565.1_12045_4_3	-	e67
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.01774	64.1	-	FSNL01	10	5030	4885	12/14/16	3/21/17	Contig	SC	SAMEA2157401	GCA_900139675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/675/GCA_900139675.1_10660_1_1	-	706
Pseudomonas sp. Irchel 3F6	2009003	PRJEB21289	398218	Proteobacteria	Gammaproteobacteria	5.92257	60	-	FYDP01	13	5317	5139	8/15/17	8/28/17	Scaffold	UNIVERSITY OF ZUERICH	SAMEA104128680	GCA_900187595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/595/GCA_900187595.1_3F6	-	-
Pseudomonas sp. Irchel 3H7	2009042	PRJEB21289	398218	Proteobacteria	Gammaproteobacteria	6.49473	59	-	FYEA01	33	5866	5706	8/15/17	8/28/17	Scaffold	UNIVERSITY OF ZUERICH	SAMEA104128683	GCA_900187605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/605/GCA_900187605.1_3H7	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18731	64.2	-	FVUS01	31	5192	5049	3/10/17	3/18/17	Contig	SC	SAMEA2160941	GCA_900139685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/685/GCA_900139685.1_10660_1_14	-	632
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.91305	54.8	-	FKFX01	110	4897	4579	4/6/16	3/28/17	Scaffold	SC	SAMEA2273222	GCA_900077575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/575/GCA_900077575.1_12045_4_92	-	e698
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.73921	31.3	-	FAYD01	53	1806	1695	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683016	GCA_001493975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/975/GCA_001493975.1_H043200357	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.82803	67.9	-	CFXC01	300	3680	3275	3/15/15	3/26/17	Scaffold	SC	SAMEA1931871	GCA_001331215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/215/GCA_001331215.1_5463_7_12	-	B143
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.93549	37.9	-	FXKD01	148	3033	2840	4/26/17	5/6/17	Contig	SC	SAMEA3893673	GCA_900180065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/065/GCA_900180065.1_19789_7_5	-	VREN3656
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.80974	37.3	-	JVAI01	107	2804	2695	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197806	GCA_001055435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/435/GCA_001055435.1_ASM105543v1	26230489	606_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.80175	56.6	-	LEZU01	9	5874	5638	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280381	GCA_001033385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/385/GCA_001033385.1_Kleb_pneu_BWH53_V1	-	BWH53
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.06731	45.2	-	MIQS01	134	4794	4609	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368231	GCA_001726335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/335/GCA_001726335.1_ASM172633v1	-	GCSL_R26
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.12064	28.4	-	FAAG01	295	3804	3693	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664093	GCA_900009415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/415/GCA_900009415.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA389224	389224	Proteobacteria	Gammaproteobacteria	4.01247	47.4	-	NIFI01	121	3837	3642	6/15/17	6/19/17	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN07192613	GCA_002196065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/065/GCA_002196065.1_ASM219606v1	-	P-18778
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.02737	68.2	-	LXDU01	306	7370	6752	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208798	GCA_001980905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/905/GCA_001980905.1_ASM198090v1	-	979bi
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.53995	50.8	-	CXCU01	375	4866	4355	7/16/15	2/24/17	Scaffold	SC	SAMEA954583	GCA_001255135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/135/GCA_001255135.1_5236_5_9	-	Sh54210_440885
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.38453	38.2	-	CDDZ01	103	3068	2894	11/4/14	3/25/17	Scaffold	ROSLIN	SAMEA2627167	GCA_000823805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/805/GCA_000823805.1_HO4020049	-	HO4020049
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05794	41.1	-	FISG01	23	2077	1952	2/10/16	3/19/17	Contig	SC	SAMEA1566169	GCA_900054605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/605/GCA_900054605.1_8337_6_84	-	FX18
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.04568	35.3	-	CDDL01	81	2055	1949	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780148	GCA_001398575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/575/GCA_001398575.1_Child4	-	Child4
Acinetobacter baumannii 554515	1310672	PRJNA194748	194748	Proteobacteria	Gammaproteobacteria	4.05412	39	-	JEXT01	295	4061	3706	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02385027	GCA_000581815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/815/GCA_000581815.1_ASM58181v1	-	554515
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.12162	65.8	-	JTWV01	177	6874	6583	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105488	GCA_000797345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/345/GCA_000797345.1_AZPAE14711	25367914	AZPAE14711
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.17907	51.7	-	FFCW01	134	2513	2128	2/9/16	3/21/17	Scaffold	SC	SAMEA2674193	GCA_900022025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/025/GCA_900022025.1_14555_6_24	-	2842STDY5881461
Helicobacter pylori	210	PRJNA286981	286981	Proteobacteria	delta/epsilon subdivisions	1.6564	38.5	-	LFJR01	16	1632	1464	8/26/15	3/26/17	Contig	University of Malaya-University of Western Australia	SAMN03774879	GCA_001275165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/165/GCA_001275165.1_ASM127516v1	-	UM163
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11718	40.1	-	CRPU01	24	2200	1991	3/23/15	3/4/17	Contig	SC	SAMEA1024701	GCA_001096185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/185/GCA_001096185.1_6775_1_8	-	SMRU824
Escherichia coli H494	656405	PRJNA39015	39015	Proteobacteria	Gammaproteobacteria	5.10741	50.6	-	AFQH01	40	5379	4920	1/10/12	2/22/17	Scaffold	Broad Institute	SAMN02596701	GCA_000242035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/035/GCA_000242035.1_Esch_coli_H494_V1	-	H494
Mycobacterium tuberculosis M1253	1448641	PRJNA235652	235652	Terrabacteria group	Actinobacteria	4.44029	65.5	-	JKOZ01	7	4285	4096	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598987	GCA_000654815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/815/GCA_000654815.1_Myco_tube_M1253_V1	-	M1253
Listeria monocytogenes	1639	PRJNA246743	246743	Terrabacteria group	Firmicutes	2.90519	37.9	-	JNGR01	42	2912	2855	12/14/15	3/1/17	Contig	Centers for Disease Control and Prevention	SAMN02769889	GCA_001466255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/255/GCA_001466255.1_ASM146625v1	-	L1181
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.73084	30.3	-	CULA01	18	1863	1763	3/31/15	3/18/17	Contig	SC	SAMEA1010403	GCA_001237085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/085/GCA_001237085.1_7038_3_90	-	OXC6340
Salmonella enterica subsp. enterica serovar Dublin str. SD3246	909945	PRJNA56085	56085	Proteobacteria	Gammaproteobacteria	4.91746	52.1454	chromosome:NZ_CM001151.1/CM001151.1; plasmid p3246_74:NZ_CM001152.1/CM001152.1	AEUK01	2	5051	4712	3/7/11	2/26/17	Chromosome	Ark Genomics	SAMN02415257	GCA_000192085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/085/GCA_000192085.1_ASM19208v1	21478351	3246
Staphylococcus aureus M0699	1388468	PRJNA216639	216639	Terrabacteria group	Firmicutes	2.85314	32.8	-	JBCJ01	44	3003	2826	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325592	GCA_000528595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/595/GCA_000528595.1_Stap_aure_M0699_V1	-	M0699
Staphylococcus aureus M0700	1388469	PRJNA216640	216640	Terrabacteria group	Firmicutes	2.8245	32.8	-	JBCI01	32	2957	2820	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325593	GCA_000528615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/615/GCA_000528615.1_Stap_aure_M0700_V1	-	M0700
Salmonella enterica subsp. enterica serovar Gallinarum str. SG9	909947	PRJNA56089	56089	Proteobacteria	Gammaproteobacteria	4.74607	52.2239	chromosome:NZ_CM001153.1/CM001153.1; plasmid unnamed:NZ_CM001154.1/CM001154.1	AEUL01	2	4830	4370	3/7/11	2/26/17	Chromosome	Ark Genomics	SAMN02225854	GCA_000192125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/125/GCA_000192125.1_ASM19212v1	21478351	9
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.73241	30.3	-	CUNE01	15	1829	1722	3/31/15	3/18/17	Contig	SC	SAMEA1010296	GCA_001237145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/145/GCA_001237145.1_7065_7_55	-	OXC6403
Listeria monocytogenes	1639	PRJNA246743	246743	Terrabacteria group	Firmicutes	3.00923	37.8	-	JPTW01	123	3014	2949	12/14/15	3/1/17	Contig	Centers for Disease Control and Prevention	SAMN02944834	GCA_001466265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/265/GCA_001466265.1_ASM146626v1	-	G6054
Mycobacterium tuberculosis M1270	1448642	PRJNA235653	235653	Terrabacteria group	Actinobacteria	4.43024	65.5	-	JKOY01	7	4287	4084	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598988	GCA_000654835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/835/GCA_000654835.1_Myco_tube_M1270_V1	-	M1270
Escherichia coli TA124	656435	PRJNA39075	39075	Proteobacteria	Gammaproteobacteria	4.93625	50.5	-	AFQI01	75	5020	4623	1/10/12	2/22/17	Scaffold	Broad Institute	SAMN02596702	GCA_000242055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/055/GCA_000242055.1_Esch_coli_TA124_V1	-	TA124
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.00972	39.7	-	CKDK01	68	2200	1956	3/21/15	3/15/17	Contig	SC	SAMEA1023880	GCA_001096305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/305/GCA_001096305.1_6593_5_8	-	3
Helicobacter pylori	210	PRJNA284175	284175	Proteobacteria	delta/epsilon subdivisions	1.65001	38.9	-	LIXF01	73	1626	1473	9/3/15	3/26/17	Contig	University of Hyderabad	SAMN04011953	GCA_001278515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/515/GCA_001278515.1_ASM127851v1	-	22
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16556	51.5	-	FFDO01	105	2507	2161	2/9/16	3/19/17	Scaffold	SC	SAMEA2674237	GCA_900022035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/035/GCA_900022035.1_14555_6_42	-	2842STDY5881479
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.53536	66.2	-	JTZR01	119	6298	6035	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105414	GCA_000797355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/355/GCA_000797355.1_AZPAE12423	25367914	AZPAE12423
Acinetobacter baumannii 83444	1310684	PRJNA194760	194760	Proteobacteria	Gammaproteobacteria	4.00448	39	-	JEYC01	273	4147	3461	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02385035	GCA_000581855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/855/GCA_000581855.1_ASM58185v1	-	83444
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	1.97131	35.3	-	CDCD01	77	1999	1895	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780149	GCA_001398595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/595/GCA_001398595.1_Mother5-1	-	Mother5-1
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.07092	41.1	-	FIJJ01	24	2068	1970	2/10/16	3/19/17	Contig	SC	SAMEA1316691	GCA_900054815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/815/GCA_900054815.1_7054_7_24	-	SS1012
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.36215	38.2	-	CCZW01	28	3064	2929	10/21/14	3/25/17	Scaffold	ROSLIN	SAMEA2627168	GCA_000823825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/825/GCA_000823825.1_HO80160261	-	HO80160261
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.37305	50.8	-	CXAU01	358	4639	4167	7/16/15	2/24/17	Scaffold	SC	SAMEA954739	GCA_001255175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/175/GCA_001255175.1_5008_7_5	-	Sh65179_401058
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.05665	68.2	-	LXDT01	279	7350	6781	1/31/17	4/29/17	Contig	Northern Arizona University	SAMN04208797	GCA_001980915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/915/GCA_001980915.1_ASM198091v1	-	975d
Vibrio cholerae	666	PRJNA383624	383624	Proteobacteria	Gammaproteobacteria	3.99564	47.5	-	NDXO01	418	3757	3525	6/15/17	6/19/17	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN06768130	GCA_002196095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/095/GCA_002196095.1_ASM219609v1	-	102
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.24981	29.1	-	FAFQ01	1127	3964	3738	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664232	GCA_900009425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/425/GCA_900009425.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.05182	45.2	-	MIQP01	114	4818	4618	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368228	GCA_001726345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/345/GCA_001726345.1_ASM172634v1	-	GCSL_R16
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.5356	57.3	-	LEZV01	10	5576	5299	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280382	GCA_001033415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/415/GCA_001033415.1_Kleb_pneu_BWH58_V1	-	BWH58
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.01936	37.2	-	JVAD01	130	3103	2952	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197811	GCA_001055475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/475/GCA_001055475.1_ASM105547v1	26230489	610_EFLS
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.93534	37.9	-	FXKG01	146	3037	2850	4/26/17	5/6/17	Contig	SC	SAMEA3893680	GCA_900180095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/095/GCA_900180095.1_19789_7_8	-	VREN3684
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.63283	67.4	-	CFYA01	1054	3715	2859	3/15/15	3/26/17	Scaffold	SC	SAMEA1932947	GCA_001331235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/235/GCA_001331235.1_5463_5_2	-	B341
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.74897	31.2	-	FBCF01	22	1842	1738	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683119	GCA_001493995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/995/GCA_001493995.1_EC5905	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.86798	55	-	FKFT01	80	4847	4588	4/6/16	3/28/17	Scaffold	SC	SAMEA2273223	GCA_900077585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/585/GCA_900077585.1_12045_4_93	-	e703
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.36212	64.1	-	FSNM01	41	5448	5295	12/14/16	3/21/17	Contig	SC	SAMEA1964284	GCA_900139695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/695/GCA_900139695.1_10660_1_11	-	640
Pseudomonas sp. Irchel s3f7	2009153	PRJEB21289	398218	Proteobacteria	Gammaproteobacteria	6.06156	59	-	FYDO01	68	5635	5337	8/15/17	8/28/17	Scaffold	UNIVERSITY OF ZUERICH	SAMEA104128667	GCA_900187615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/615/GCA_900187615.1_s3f7	-	-
Pseudomonas sp. Irchel 3F5	2009002	PRJEB21289	398218	Proteobacteria	Gammaproteobacteria	5.85781	62.3	-	FYDQ01	28	5406	5239	8/15/17	8/28/17	Scaffold	UNIVERSITY OF ZUERICH	SAMEA104128681	GCA_900187625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/625/GCA_900187625.1_3F5	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.0443	64.2	-	FVUR01	33	5061	4922	3/10/17	3/18/17	Contig	SC	SAMEA2150414	GCA_900139705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/705/GCA_900139705.1_10660_1_12	-	679
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.27055	55	-	FKFW01	51	5178	4943	4/6/16	3/28/17	Scaffold	SC	SAMEA2273125	GCA_900077595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/595/GCA_900077595.1_12045_4_4	-	e71
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.73424	31.2	-	FBOC01	72	1785	1668	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683406	GCA_001494035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/035/GCA_001494035.1_p474D	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.77641	67.7	-	CFYJ01	595	3775	3121	3/15/15	3/26/17	Scaffold	SC	SAMEA1933007	GCA_001331255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/255/GCA_001331255.1_5463_5_8	-	B155
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.93557	37.9	-	FXKH01	145	3039	2847	4/26/17	5/6/17	Contig	SC	SAMEA3893681	GCA_900180105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/105/GCA_900180105.1_19789_7_9	-	VREN3685
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.99707	37.3	-	JVQY01	105	3084	2939	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197374	GCA_001055675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/675/GCA_001055675.1_ASM105567v1	26230489	183_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.45834	57.3	-	LEZW01	5	5402	5142	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280383	GCA_001033445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/445/GCA_001033445.1_Kleb_pneu_BWH62_V1	-	BWH62
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.12398	45.2	-	MIQR01	79	4874	4702	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368230	GCA_001726355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/355/GCA_001726355.1_ASM172635v1	-	GCSL_R21
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.23201	29	-	FAJV01	1317	3817	3626	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664339	GCA_900009445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/445/GCA_900009445.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA383627	383627	Proteobacteria	Gammaproteobacteria	4.10718	47.4	-	NDXQ01	259	3902	3701	6/15/17	6/19/17	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN06768132	GCA_002196105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/105/GCA_002196105.1_ASM219610v1	-	147
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.03962	68.3	-	LXDW01	149	7316	6811	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208800	GCA_001980965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/965/GCA_001980965.1_ASM198096v1	-	984a
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.37991	50.9	-	CXBS01	439	4632	4160	7/16/15	2/24/17	Scaffold	SC	SAMEA954856	GCA_001255195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/195/GCA_001255195.1_5236_2_6	-	ShIB1997_440758
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.3631	38.2	-	CCZV01	37	3060	2926	10/21/14	3/25/17	Scaffold	ROSLIN	SAMEA2627169	GCA_000823845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/845/GCA_000823845.1_HO80160262	-	HO80160262
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.0316	41.1	-	FILG01	26	2025	1919	2/10/16	3/19/17	Contig	SC	SAMEA1316702	GCA_900054835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/835/GCA_900054835.1_7054_7_5	-	SS969
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	1.97204	35.3	-	CDCC01	77	1996	1894	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780150	GCA_001398615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/615/GCA_001398615.1_Mother5-2	-	Mother5-2
Acinetobacter baumannii 144107	1310688	PRJNA194764	194764	Proteobacteria	Gammaproteobacteria	3.92197	39.1	-	JEYE01	80	3748	3523	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02385036	GCA_000581875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/875/GCA_000581875.1_ASM58187v1	-	144107
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.33547	65.6	-	JTZQ01	113	7123	6877	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105415	GCA_000797395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/395/GCA_000797395.1_AZPAE13756	25367914	AZPAE13756
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.1592	51.5	-	FFDY01	71	2504	2144	2/9/16	3/21/17	Scaffold	SC	SAMEA2674271	GCA_900022045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/045/GCA_900022045.1_14555_6_59	-	2842STDY5881496
Helicobacter pylori	210	PRJNA284178	284178	Proteobacteria	delta/epsilon subdivisions	1.66721	38.7	-	LIXH01	59	1633	1484	9/3/15	3/26/17	Contig	University of Hyderabad	SAMN04011955	GCA_001278525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/525/GCA_001278525.1_ASM127852v1	-	59
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.13528	39.7	-	CNPF02	171	2267	1986	3/23/15	3/11/17	Contig	SC	SAMEA1032620	GCA_001096405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/405/GCA_001096405.2_6930_8_9	-	R34-3015
Escherichia coli O157:H43 str. T22	1137135	PRJNA81821	81821	Proteobacteria	Gammaproteobacteria	4.95898	50.8	-	AHZD02	64	5203	4739	2/14/12	2/23/17	Scaffold	BAYGEN	SAMN02469320	GCA_000247665.4	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/665/GCA_000247665.4_EcoliT22_2.0	23723396	T22
Mycobacterium tuberculosis M1271	1448643	PRJNA235654	235654	Terrabacteria group	Actinobacteria	4.44082	65.5	-	JKOX01	9	4300	4114	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598989	GCA_000654855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/855/GCA_000654855.1_Myco_tube_M1271_V1	-	M1271
Listeria monocytogenes	1639	PRJNA246743	246743	Terrabacteria group	Firmicutes	2.98036	37.8	-	JPTX01	66	2994	2926	12/14/15	3/1/17	Contig	Centers for Disease Control and Prevention	SAMN02944835	GCA_001466295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/295/GCA_001466295.1_ASM146629v1	-	G4599
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.65683	30.5	-	CULS01	18	1714	1605	3/31/15	3/18/17	Contig	SC	SAMEA1010246	GCA_001237205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/205/GCA_001237205.1_7065_7_18	-	OXC6364
Salmonella enterica subsp. enterica serovar Infantis str. SARB27	596155	PRJNA33185	33185	Proteobacteria	Gammaproteobacteria	4.88157	52.19	chromosome:NZ_CM001274.1/CM001274.1	AFYI01	2	4874	4570	10/18/11	2/26/17	Chromosome	WUGSC	SAMN01081638	GCA_000230875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/230/875/GCA_000230875.1_Salmonella_enterica_SARB27-2.0	-	SARB27
Staphylococcus aureus M0701	1388470	PRJNA216641	216641	Terrabacteria group	Firmicutes	2.87743	32.9	-	JBCH01	47	3035	2857	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325594	GCA_000528635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/635/GCA_000528635.1_Stap_aure_M0701_V1	-	M0701
Staphylococcus aureus M0703	1388471	PRJNA216642	216642	Terrabacteria group	Firmicutes	2.88459	32.8	-	JBCG01	46	3044	2876	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325595	GCA_000528655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/655/GCA_000528655.1_Stap_aure_M0703_V1	-	M0703
Salmonella enterica subsp. houtenae str. ATCC BAA-1581	523831	PRJNA28767	28767	Proteobacteria	Gammaproteobacteria	4.81214	51.695	chromosome:NZ_CM001471.1/CM001471.1; plasmid pSEHO0A1:NZ_CM001472.1/CM001472.1; plasmid pSEHO0A2:NZ_CM001473.1/CM001473.1	AGRM01	3	4822	4450	3/2/12	2/26/17	Chromosome	Washington University Genome Sequencing Center	SAMN01081629	GCA_000251025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/025/GCA_000251025.1_Salmonella_enterica_IV_05-0642-2.0.1	-	ATCC BAA-1581
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.65715	30.5	-	CUIJ01	12	1755	1667	3/31/15	3/18/17	Contig	SC	SAMEA1010378	GCA_001237265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/265/GCA_001237265.1_7038_3_28	-	OXC6277
Listeria monocytogenes	1639	PRJNA246427	246427	Terrabacteria group	Firmicutes	3.01381	37.9	-	JMUA01	46	3027	2971	12/16/15	3/1/17	Contig	Cornell University	SAMN02767551	GCA_001468565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/565/GCA_001468565.1_F4233	-	F4233
Mycobacterium tuberculosis M1273	1448644	PRJNA235655	235655	Terrabacteria group	Actinobacteria	4.41097	65.5	-	JKOW01	8	4278	4078	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598990	GCA_000654875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/875/GCA_000654875.1_Myco_tube_M1273_V1	-	M1273
Escherichia coli O104:H4 str. ON2011	1136218	PRJNA81623	81623	Proteobacteria	Gammaproteobacteria	5.4152	50.5	-	AHZF01	7	5575	5130	4/12/12	5/18/17	Scaffold	Wayne State University	SAMN02472117	GCA_000258615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/615/GCA_000258615.1_ASM25861v1	22493677	ON2011
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.00317	39.8	-	CLMU01	61	2188	1982	3/21/15	3/11/17	Contig	SC	SAMEA1028830	GCA_001096525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/525/GCA_001096525.1_6938_7_7	-	SMRU2695
Helicobacter pylori	210	PRJNA284176	284176	Proteobacteria	delta/epsilon subdivisions	1.64262	38.8	-	LIXG01	55	1628	1499	9/3/15	3/26/17	Contig	University of Hyderabad	SAMN04011954	GCA_001278545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/545/GCA_001278545.1_ASM127854v1	-	45
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.20242	51.6	-	FEQX01	87	2581	2215	2/9/16	3/21/17	Scaffold	SC	SAMEA2673829	GCA_900022335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/335/GCA_900022335.1_14355_4_20	-	2842STDY5880977
Pseudomonas aeruginosa	287	PRJNA266267	266267	Proteobacteria	Gammaproteobacteria	6.27851	66.1	-	JSWB01	176	6143	5438	1/9/15	3/16/17	Scaffold	Osmania	SAMN03160602	GCA_000817165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/165/GCA_000817165.1_DR1_assembly	-	DR1
Acinetobacter baumannii 532279	1310692	PRJNA194768	194768	Proteobacteria	Gammaproteobacteria	4.04253	38.8	-	JEYH01	34	3874	3637	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02385040	GCA_000581895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/895/GCA_000581895.1_ASM58189v1	-	532279
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	1.97138	35.3	-	CDEH01	74	1999	1897	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780151	GCA_001398635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/635/GCA_001398635.1_Child5	-	Child5
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.04585	41.1	-	FILZ01	31	2046	1947	2/10/16	3/19/17	Contig	SC	SAMEA1316565	GCA_900054845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/845/GCA_900054845.1_7054_7_75	-	SS995
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.3726	38.2	-	CCZX01	82	3103	2895	10/21/14	3/25/17	Scaffold	ROSLIN	SAMEA2627170	GCA_000823865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/865/GCA_000823865.1_HO80160263	-	HO80160263
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.71808	50.7	-	CXJO01	418	5274	4547	7/16/15	2/24/17	Scaffold	SC	SAMEA2035204	GCA_001255235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/235/GCA_001255235.1_8290_4_12	-	95015
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.06483	68.2	-	LXDV01	139	7340	6822	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208799	GCA_001980985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/985/GCA_001980985.1_ASM198098v1	-	979bii
Vibrio cholerae	666	PRJNA383628	383628	Proteobacteria	Gammaproteobacteria	4.11528	47.5	-	NDXR01	165	3920	3754	6/15/17	6/19/17	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN06768133	GCA_002196135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/135/GCA_002196135.1_ASM219613v1	-	89
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.19323	28.5	-	FAJU01	533	3932	3782	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664340	GCA_900009455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/455/GCA_900009455.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.13286	45.2	-	MIQU01	131	4881	4676	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368233	GCA_001726405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/405/GCA_001726405.1_ASM172640v1	-	GCSL_R30
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.84937	56.8	-	LEZX01	120	5885	5536	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280384	GCA_001033455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/455/GCA_001033455.1_Kleb_pneu_MGH81_V1	-	MGH81
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.96057	37.4	-	JVQT01	64	2983	2877	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197379	GCA_001055725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/725/GCA_001055725.1_ASM105572v1	26230489	188_EFLS
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.93757	37.9	-	FXKV01	151	3039	2847	4/26/17	5/6/17	Contig	SC	SAMEA3894146	GCA_900180215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/215/GCA_900180215.1_19952_1_31	-	VREN3650
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.65402	67.3	-	CFXX01	961	3718	2860	3/15/15	3/26/17	Scaffold	SC	SAMEA1970817	GCA_001331275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/275/GCA_001331275.1_5463_3_10	-	B159
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.56407	31.8	-	FBGE01	28	1564	1506	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683230	GCA_001494055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/055/GCA_001494055.1_H060960756	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.25971	55.4	-	FKFV01	78	5292	5035	4/6/16	3/28/17	Scaffold	SC	SAMEA2273216	GCA_900077605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/605/GCA_900077605.1_12045_4_86	-	e669
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98534	64.2	-	FVUU01	11	4988	4872	3/10/17	3/18/17	Contig	SC	SAMEA2144384	GCA_900139755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/755/GCA_900139755.1_10660_1_18	-	535
Pseudomonas sp. Irchel 3H3	2009038	PRJEB21289	398218	Proteobacteria	Gammaproteobacteria	5.9956	61.2	-	FYEC01	65	5519	5321	8/15/17	8/28/17	Scaffold	UNIVERSITY OF ZUERICH	SAMEA104128682	GCA_900187635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/635/GCA_900187635.1_3H3	-	-
Pseudomonas sp. Irchel 3E20	2008983	PRJEB21289	398218	Proteobacteria	Gammaproteobacteria	5.30457	62.3	-	FYEE01	35	4812	4664	8/15/17	8/28/17	Scaffold	UNIVERSITY OF ZUERICH	SAMEA104128676	GCA_900187645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/645/GCA_900187645.1_3E20	-	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.99714	64.1	-	FVUX01	22	5034	4895	3/10/17	3/18/17	Contig	SC	SAMEA2148581	GCA_900139795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/795/GCA_900139795.1_10660_1_21	-	688
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.02334	54.8	-	FKGB01	37	4921	4681	4/6/16	3/28/17	Scaffold	SC	SAMEA2273225	GCA_900077615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/615/GCA_900077615.1_12045_4_95	-	e716
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.6593	31.4	-	FBCY01	21	1723	1631	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683136	GCA_001494075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/075/GCA_001494075.1_EC4675	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.72338	67.4	-	CFXM01	665	3732	2999	3/15/15	3/26/17	Scaffold	SC	SAMEA2015293	GCA_001331295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/295/GCA_001331295.1_5463_6_8	-	B110
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.93686	37.9	-	FXKS01	143	3041	2848	4/26/17	5/6/17	Contig	SC	SAMEA3894148	GCA_900180225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/225/GCA_900180225.1_19952_1_33	-	VREN3683
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.96191	37.4	-	JVQF01	57	2996	2873	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197393	GCA_001055875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/875/GCA_001055875.1_ASM105587v1	26230489	200_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.41036	57.4	-	LEZY01	5	5396	5179	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280385	GCA_001033465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/465/GCA_001033465.1_Kleb_pneu_MGH82_V1	-	MGH82
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.12681	45.2	-	MIQV01	132	4869	4672	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368234	GCA_001726415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/415/GCA_001726415.1_ASM172641v1	-	GCSL_R31
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.1888	28.8	-	FALH01	888	3826	3636	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664378	GCA_900009465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/465/GCA_900009465.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA383643	383643	Proteobacteria	Gammaproteobacteria	4.11793	47.5	-	NDXT01	104	3945	3759	6/15/17	6/19/17	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN06768535	GCA_002196155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/155/GCA_002196155.1_ASM219615v1	-	155
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	6.98598	68.3	-	LXDX01	139	7253	6722	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208801	GCA_001980995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/995/GCA_001980995.1_ASM198099v1	-	2374a
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.87623	50.5	-	CXAC01	451	5519	4706	7/17/15	2/24/17	Scaffold	SC	SAMEA2445756	GCA_001255255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/255/GCA_001255255.1_12971_8_65	-	H134140472
Legionella pneumophila	446	PRJEB6631	263730	Proteobacteria	Gammaproteobacteria	3.45398	38.3	-	CCZY01	39	3163	3011	10/21/14	3/25/17	Scaffold	ROSLIN	SAMEA2627171	GCA_000823885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/885/GCA_000823885.1_HO92620872	-	HO92620872
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.08272	41.2	-	FINR01	24	2117	2011	2/10/16	3/19/17	Contig	SC	SAMEA1566055	GCA_900054855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/855/GCA_900054855.1_8337_6_41	-	BM452C
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.04544	35.2	-	CDEA01	73	2100	2006	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780152	GCA_001398655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/655/GCA_001398655.1_Mother6	-	Mother6
Acinetobacter baumannii 232184	1310694	PRJNA194770	194770	Proteobacteria	Gammaproteobacteria	3.87212	39	-	JEYI01	59	3701	3474	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02385041	GCA_000581915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/915/GCA_000581915.1_ASM58191v1	-	232184
Pseudomonas aeruginosa	287	PRJNA273956	273956	Proteobacteria	Gammaproteobacteria	6.73082	66	-	JYGC02	24	6521	6302	3/3/15	3/17/17	Scaffold	Walter Reed Army Institute of Research	SAMN03316892	GCA_000937465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/465/GCA_000937465.2_ASM93746v2	-	MRSN 20176
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16413	51.5	-	FESJ01	90	2506	2161	2/9/16	3/21/17	Scaffold	SC	SAMEA2673798	GCA_900022345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/345/GCA_900022345.1_14355_5_10	-	2842STDY5881063
Helicobacter pylori	210	PRJNA295618	295618	Proteobacteria	delta/epsilon subdivisions	1.58257	38.7	-	LJXL02	31	1574	1418	11/19/15	3/28/17	Contig	University of Malaya-University of Western Australia	SAMN04076429	GCA_001446305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/305/GCA_001446305.2_ASM144630v2	-	UM171S
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	1.97805	39.7	-	CKXE01	43	2182	1968	3/21/15	3/11/17	Contig	SC	SAMEA1026105	GCA_001096605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/605/GCA_001096605.1_6823_6_2	-	SMRU1970
Escherichia coli O104:H4 str. ON2010	1136217	PRJNA81621	81621	Proteobacteria	Gammaproteobacteria	5.11137	50.6	-	AHZE01	5	5402	4988	4/12/12	6/19/17	Scaffold	Wayne State University	SAMN02472119	GCA_000258635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/635/GCA_000258635.1_ASM25863v1	22493677	ON2010
Mycobacterium tuberculosis M1274	1448645	PRJNA235656	235656	Terrabacteria group	Actinobacteria	4.41749	65.6	-	JKOV01	84	4337	4111	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598991	GCA_000654895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/895/GCA_000654895.1_Myco_tube_M1274_V1	-	M1274
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.96171	37.9	-	LNOD01	21	3009	2930	12/23/15	3/1/17	Contig	FDA	SAMN02769670	GCA_001481795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/795/GCA_001481795.1_ASM148179v1	26950338	MOD1_LS47
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.67587	30.5	-	CUPN01	20	1779	1674	3/31/15	3/18/17	Contig	SC	SAMEA1010339	GCA_001237385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/385/GCA_001237385.1_7092_1_23	-	OXC6470
Salmonella enterica subsp. enterica	59201	PRJNA241066	241066	Proteobacteria	Gammaproteobacteria	5.08503	52.1166	chromosome:NZ_CP007484.1/CP007484.1; plasmid p3K:NZ_CP007488.1/CP007488.1; plasmid pSTM:NZ_CP007489.1/CP007489.1	-	6	5277	5006	8/2/16	3/1/17	Chromosome	Genome Center	SAMN02688040	GCA_001700595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/595/GCA_001700595.1_ASM170059v1	-	SA972816
Staphylococcus aureus M0706	1388473	PRJNA216644	216644	Terrabacteria group	Firmicutes	2.93499	32.9	-	JBCE01	75	3102	2903	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325597	GCA_000528675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/675/GCA_000528675.1_Stap_aure_M0706_V1	-	M0706
Staphylococcus aureus M0707	1388474	PRJNA216645	216645	Terrabacteria group	Firmicutes	2.89631	32.9	-	JBCD01	67	3088	2912	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325598	GCA_000528695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/695/GCA_000528695.1_Stap_aure_M0707_V1	-	M0707
Salmonella enterica subsp. enterica serovar Typhimurium str. STm12	1218152	PRJNA171802	171802	Proteobacteria	Gammaproteobacteria	4.98196	52	-	AMEG02	253	5078	4834	11/13/12	2/26/17	Scaffold	University of Melbourne	SAMN02225282	GCA_000312785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/785/GCA_000312785.2_STm12.2	23792739	STm12
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.72437	30.2	-	CUUE01	16	1822	1692	3/31/15	3/18/17	Contig	SC	SAMEA1401027	GCA_001237465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/465/GCA_001237465.1_7213_3_48	-	OXC6591
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.95321	37.9	-	LNOC01	14	3035	2947	12/23/15	3/1/17	Contig	FDA	SAMN02769664	GCA_001481805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/805/GCA_001481805.1_ASM148180v1	26950338	MOD1_LS41
Mycobacterium tuberculosis M1283	1448646	PRJNA235657	235657	Terrabacteria group	Actinobacteria	4.4305	65.6	-	JKOU01	8	4283	4097	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598992	GCA_000654915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/915/GCA_000654915.1_Myco_tube_M1283_V1	-	M1283
Escherichia coli LCT-EC106	1163386	PRJNA89725	89725	Proteobacteria	Gammaproteobacteria	5.2126	50.3	-	AJRI01	37	5339	4960	4/27/12	5/18/17	Scaffold	BGI	SAMN02469360	GCA_000259695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/695/GCA_000259695.1_ASM25969v1	22843582	LCT-EC106
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.1964	39.7	-	CMQH01	92	2433	2190	3/23/15	3/11/17	Contig	SC	SAMEA2061736	GCA_001096645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/645/GCA_001096645.1_9803_8_10	-	6B
Helicobacter pylori	210	PRJNA295616	295616	Proteobacteria	delta/epsilon subdivisions	1.54201	38.9	-	LJXJ02	24	1543	1395	11/19/15	3/28/17	Contig	University of Malaya - University of Western Australia	SAMN04076427	GCA_001446315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/315/GCA_001446315.2_ASM144631v2	-	UM229R
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.19958	51.5	-	FESM01	95	2559	2207	2/9/16	3/19/17	Scaffold	SC	SAMEA2673810	GCA_900022355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/355/GCA_900022355.1_14355_5_14	-	2842STDY5881067
Pseudomonas aeruginosa	287	PRJNA273956	273956	Proteobacteria	Gammaproteobacteria	6.93307	66	-	JYGB02	40	6785	6556	3/3/15	3/17/17	Scaffold	Walter Reed Army Institute of Research	SAMN03316899	GCA_000937495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/495/GCA_000937495.2_ASM93749v2	-	MRSN 17623
Acinetobacter baumannii 1575710	1310699	PRJNA194775	194775	Proteobacteria	Gammaproteobacteria	4.12636	39.1	-	JEYM01	128	4136	3803	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02385046	GCA_000581935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/935/GCA_000581935.1_ASM58193v1	-	1575710
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.04304	35.2	-	CDCF01	62	2095	2005	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780153	GCA_001398675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/675/GCA_001398675.1_Child6-1	-	Child6-1
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05896	41.1	-	FINY01	22	2072	1967	2/10/16	3/19/17	Contig	SC	SAMEA1566144	GCA_900054865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/865/GCA_900054865.1_8337_6_48	-	EN003
Legionella pneumophila	446	PRJNA278005	278005	Proteobacteria	Gammaproteobacteria	3.47106	38.2	-	LCUQ01	57	3173	3004	2/5/16	3/27/17	Scaffold	"National Institute of Health, Portugal"	SAMN03401156	GCA_001549915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/915/GCA_001549915.1_ASM154991v1	26840151	PtVF89/2014
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.61137	50.9	-	CXEB01	430	4954	4428	7/17/15	2/24/17	Scaffold	SC	SAMEA954626	GCA_001255275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/275/GCA_001255275.1_5417_1_2	-	19910761_1361368
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.04564	68.3	-	LXDY01	134	7279	6767	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208802	GCA_001981025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/025/GCA_001981025.1_ASM198102v1	-	2374b
Vibrio cholerae	666	PRJNA383622	383622	Proteobacteria	Gammaproteobacteria	3.96043	47.5	-	NDXM01	231	3726	3551	6/15/17	6/19/17	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN06768128	GCA_002196165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/165/GCA_002196165.1_ASM219616v1	-	5
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.18994	28.8	-	FANF01	744	3781	3643	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664428	GCA_900009475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/475/GCA_900009475.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.0438	45.3	-	MIQX01	94	4749	4601	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368236	GCA_001726435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/435/GCA_001726435.1_ASM172643v1	-	GCSL_R33
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.52403	57	-	LEZZ01	5	5486	5214	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280387	GCA_001033505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/505/GCA_001033505.1_Kleb_pneu_MGH84_V1	-	MGH84
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.01209	37.3	-	JVPS01	114	3091	2969	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197406	GCA_001055935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/935/GCA_001055935.1_ASM105593v1	26230489	213_EFLS
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.94201	37.9	-	FXKW01	145	3054	2854	4/26/17	5/6/17	Contig	SC	SAMEA3894147	GCA_900180255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/255/GCA_900180255.1_19952_1_32	-	VREN3653
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.69184	67.4	-	CHFK01	792	3740	2967	4/21/15	3/26/17	Scaffold	SC	SAMEA2015295	GCA_001331335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/335/GCA_001331335.1_5463_6_4	-	B106
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.57394	31.8	-	FBIP01	29	1582	1516	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683291	GCA_001494095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/095/GCA_001494095.1_H060740717	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.29139	54.7	-	FKGC01	85	5304	5040	4/6/16	3/28/17	Scaffold	SC	SAMEA2273228	GCA_900077625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/625/GCA_900077625.1_11983_7_2	-	e742
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96531	64.1	-	FSNR01	10	4953	4835	12/14/16	3/21/17	Contig	SC	SAMEA2152657	GCA_900139815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/815/GCA_900139815.1_10660_1_26	-	608
Pseudomonas sp. LAIL14HWK12:I4	1259802	PRJEB21381	391615	Proteobacteria	Gammaproteobacteria	4.75621	61.7	-	FYEL01	52	4309	4128	6/23/17	6/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02746026	GCA_900187905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/905/GCA_900187905.1_IMG-taxon_2545555813_annotated_assembly	-	LAIL14HWK12:I4
Pseudomonas sp. URIL14HWK12:I8	1265489	PRJEB21382	391614	Proteobacteria	Gammaproteobacteria	5.8227	62	-	FYEI01	27	5456	5262	6/23/17	6/28/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN02745900	GCA_900187915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/187/915/GCA_900187915.1_IMG-taxon_2545555814_annotated_assembly	-	URIL14HWK12:I8
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.06467	64.1	-	FVVA01	21	5070	4971	3/10/17	3/18/17	Contig	SC	SAMEA2142610	GCA_900139825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/825/GCA_900139825.1_10660_1_27	-	592
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.86533	55.1	-	FKFY01	43	4777	4539	4/6/16	3/28/17	Scaffold	SC	SAMEA2273226	GCA_900077635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/635/GCA_900077635.1_12045_4_96	-	e722
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.63881	31.4	-	FBLU01	18	1692	1602	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683376	GCA_001494135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/135/GCA_001494135.1_SWAN350	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.74773	67.5	-	CFXI01	748	3796	3066	3/15/15	3/26/17	Scaffold	SC	SAMEA2031986	GCA_001331355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/355/GCA_001331355.1_5463_5_7	-	B147
Enterococcus faecium	1352	PRJEB13191	330638	Terrabacteria group	Firmicutes	2.93825	37.9	-	FXKZ01	146	3036	2840	4/26/17	5/6/17	Contig	SC	SAMEA3916201	GCA_900180315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/315/GCA_900180315.1_19952_4_125	-	VREN3643
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.89199	37.3	-	JVPJ01	74	2900	2797	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197415	GCA_001055955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/955/GCA_001055955.1_ASM105595v1	26230489	222_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.46207	57.3	-	LFAA01	7	5462	5222	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280388	GCA_001033525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/525/GCA_001033525.1_Kleb_pneu_MGH89_V1	-	MGH89
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.05959	45.3	-	MIQW01	105	4789	4574	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368235	GCA_001726445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/445/GCA_001726445.1_ASM172644v1	-	GCSL_R32
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.04141	28.6	-	CZXP01	1293	3688	3471	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664022	GCA_900009705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/705/GCA_900009705.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA383623	383623	Proteobacteria	Gammaproteobacteria	4.07605	47.4	-	NDXN01	98	3905	3733	6/15/17	6/19/17	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN06768129	GCA_002196175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/175/GCA_002196175.1_ASM219617v1	-	28
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.11991	68.2	-	LXDZ01	145	7361	6834	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208803	GCA_001981045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/045/GCA_001981045.1_ASM198104v1	-	2381a
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.73037	50.6	-	CXKC01	376	5342	4552	7/16/15	2/24/17	Scaffold	SC	SAMEA2003438	GCA_001255315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/315/GCA_001255315.1_8290_4_36	-	99366
Legionella pneumophila	446	PRJNA278002	278002	Proteobacteria	Gammaproteobacteria	3.47363	38.2	-	LCUP01	52	3175	3005	2/5/16	3/27/17	Scaffold	"National Institute of Health, Portugal"	SAMN03401155	GCA_001549925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/925/GCA_001549925.1_ASM154992v1	26840151	PtVF66/2014
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05517	41.1	-	FIRE01	25	2076	1950	2/10/16	3/19/17	Contig	SC	SAMEA1566035	GCA_900054875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/875/GCA_900054875.1_8525_5_69	-	VS3121
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.04318	35.2	-	CDCH01	64	2096	2007	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780154	GCA_001398695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/695/GCA_001398695.1_Child6-2	-	Child6-2
Acinetobacter baumannii 268680	1310701	PRJNA194777	194777	Proteobacteria	Gammaproteobacteria	3.86383	39	-	JEYN01	43	3683	3475	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02385047	GCA_000581955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/955/GCA_000581955.1_ASM58195v1	-	268680
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.38584	66.4	-	LEFI01	178	6174	5764	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566336	GCA_001037045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/045/GCA_001037045.1_ASM103704v1	-	Pae_CF67.06l
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.19612	51.6	-	FESQ01	82	2552	2181	2/9/16	3/21/17	Scaffold	SC	SAMEA2673856	GCA_900022365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/365/GCA_900022365.1_14355_5_28	-	2842STDY5881081
Helicobacter pylori	210	PRJNA295619	295619	Proteobacteria	delta/epsilon subdivisions	1.54162	38.9	-	LJXM02	25	1541	1397	11/19/15	3/28/17	Contig	University of Malaya-University of Western Australia	SAMN04076430	GCA_001446325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/325/GCA_001446325.2_ASM144632v2	-	UM171R
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05059	39.6	-	CNOC02	132	2244	2028	3/23/15	3/11/17	Contig	SC	SAMEA1032619	GCA_001096685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/685/GCA_001096685.2_6925_2_76	-	R34-3057
Escherichia coli M919	656421	PRJNA39047	39047	Proteobacteria	Gammaproteobacteria	5.40397	50.5	-	AEVZ01	21	5539	5131	4/27/12	2/22/17	Scaffold	Broad Institute	SAMN02596697	GCA_000261145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/145/GCA_000261145.1_Esch_coli_M919_V2	-	M919
Mycobacterium tuberculosis M1272	1448647	PRJNA235658	235658	Terrabacteria group	Actinobacteria	4.4186	65.6	-	JKOT01	8	4270	4093	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598993	GCA_000654935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/935/GCA_000654935.1_Myco_tube_M1272_V1	-	M1272
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.95696	37.9	-	LNOE01	21	3045	2955	12/23/15	3/1/17	Contig	FDA	SAMN02769673	GCA_001481815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/815/GCA_001481815.1_ASM148181v1	26950338	MOD1_LS50
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.72881	30.3	-	CULN01	30	1822	1685	3/31/15	3/18/17	Contig	SC	SAMEA1010349	GCA_001237545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/545/GCA_001237545.1_7065_7_15	-	OXC6361
Salmonella enterica subsp. enterica serovar Dublin str. UC16	1192688	PRJNA168719	168719	Proteobacteria	Gammaproteobacteria	4.85203	52.1	-	APMR01	133	4975	4695	3/27/13	2/28/17	Scaffold	The Genome Institute	SAMN02415292	GCA_000353305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/305/GCA_000353305.2_ASM35330v2	-	UC16
Staphylococcus aureus M0708	1388475	PRJNA216646	216646	Terrabacteria group	Firmicutes	2.89352	32.9	-	JBCC01	55	3058	2885	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325599	GCA_000528715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/715/GCA_000528715.1_Stap_aure_M0708_V1	-	M0708
Staphylococcus aureus M0709	1388476	PRJNA216647	216647	Terrabacteria group	Firmicutes	2.87711	32.8	-	JBCB01	68	3054	2920	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325600	GCA_000528735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/735/GCA_000528735.1_Stap_aure_M0709_V1	-	M0709
Salmonella enterica subsp. enterica serovar Dublin str. DG22	1192689	PRJNA168720	168720	Proteobacteria	Gammaproteobacteria	5.05049	51.9	-	ATFR01	145	5209	4903	6/25/13	3/1/17	Scaffold	The Genome Institute	SAMN02415293	GCA_000414745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/745/GCA_000414745.2_ASM41474v2	-	DG22
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.74061	30.3	-	CUVB01	16	1852	1760	3/31/15	3/18/17	Contig	SC	SAMEA1401333	GCA_001237565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/565/GCA_001237565.1_7213_3_72	-	OXC6616
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	3.05213	37.8	-	LNNL01	27	3091	3007	12/23/15	3/1/17	Contig	FDA	SAMN02769665	GCA_001481825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/825/GCA_001481825.1_ASM148182v1	26950338	MOD1_LS42
Mycobacterium tuberculosis M1287	1448648	PRJNA235659	235659	Terrabacteria group	Actinobacteria	4.4194	65.5	-	JKOS01	3	4262	4081	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598994	GCA_000654955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/955/GCA_000654955.1_Myco_tube_M1287_V1	-	M1287
Escherichia coli B799	550682	PRJNA38929	38929	Proteobacteria	Gammaproteobacteria	5.39341	50.5	-	AHWG01	13	5601	5271	4/30/12	2/22/17	Scaffold	Broad Institute	SAMN02596895	GCA_000261385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/385/GCA_000261385.1_Esch_coli_B799_V1	-	B799
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.09273	39.7	-	CKOM01	45	2317	2090	3/21/15	3/11/17	Contig	SC	SAMEA1024767	GCA_001096705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/705/GCA_001096705.1_6680_4_12	-	34
Helicobacter pylori	210	PRJNA295641	295641	Proteobacteria	delta/epsilon subdivisions	1.56235	38.9	-	LJXP02	30	1533	1399	11/19/15	3/28/17	Contig	University of Malaya-University of Western Australia	SAMN04087145	GCA_001446385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/385/GCA_001446385.2_ASM144638v2	-	UM233S
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12229	51.7	-	FETB01	90	2481	2170	2/9/16	3/19/17	Scaffold	SC	SAMEA2673914	GCA_900022375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/375/GCA_900022375.1_14355_5_46	-	2842STDY5881099
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.38921	66.4	-	LEFJ01	150	6139	5795	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566337	GCA_001037055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/055/GCA_001037055.1_ASM103705v1	-	Pae_CF67.06m
Acinetobacter baumannii 831240	1310702	PRJNA194778	194778	Proteobacteria	Gammaproteobacteria	3.9709	39	-	JEYO01	103	3835	3626	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02385048	GCA_000581975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/975/GCA_000581975.1_ASM58197v1	-	831240
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.09499	35.4	-	CDCJ01	70	2129	2034	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780155	GCA_001398715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/715/GCA_001398715.1_Mother7	-	Mother7
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.23507	41.2	-	FIGV01	36	2192	2059	2/10/16	3/19/17	Contig	SC	SAMEA1316615	GCA_900055105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/105/GCA_900055105.1_7114_5_49	-	LSS49
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.59473	38.3	-	LOLS01	101	3305	3127	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329975	GCA_001600895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/600/895/GCA_001600895.1_ASM160089v1	-	NY16
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.73722	50.7	-	CWVB01	392	5297	4441	7/16/15	2/24/17	Scaffold	SC	SAMEA3345066	GCA_001255355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/355/GCA_001255355.1_Sg_201312549_TCGGCA_L001	-	201312549_1
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.06087	68.2	-	LXEA01	136	7298	6771	1/31/17	4/29/17	Contig	Northern Arizona University	SAMN04208804	GCA_001981055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/055/GCA_001981055.1_ASM198105v1	-	2381c
Vibrio cholerae	666	PRJNA383631	383631	Proteobacteria	Gammaproteobacteria	4.01825	47.5	-	NDXS01	1339	4234	3380	6/15/17	6/19/17	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN06768135	GCA_002196185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/185/GCA_002196185.1_ASM219618v1	-	223
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.21352	29	-	FABJ01	978	3815	3622	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664122	GCA_900009715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/715/GCA_900009715.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	4.98189	45.3	-	MIQY01	105	4684	4494	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN03358818	GCA_001726485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/485/GCA_001726485.1_ASM172648v1	-	GCSL_R42
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.53521	57.1	-	LFAB01	8	5516	5245	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280389	GCA_001033535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/535/GCA_001033535.1_Kleb_pneu_MGH90_V1	-	MGH90
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.02318	37.3	-	JVOG01	125	3123	2987	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197444	GCA_001056075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/075/GCA_001056075.1_ASM105607v1	26230489	253_EFLS
Enterococcus faecium	1352	PRJNA261110	261110	Terrabacteria group	Firmicutes	2.47604	38	-	JRUF01	65	2481	2304	10/20/14	3/24/17	Scaffold	University of Copenhagen	SAMN03068950	GCA_000767345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/345/GCA_000767345.1_ASM76734v1	-	70-7-8
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.7877	67.8	-	CHFP01	511	3732	3216	4/21/15	3/26/17	Scaffold	SC	SAMEA751125	GCA_001331375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/375/GCA_001331375.1_5515_7_8	-	B003
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68038	31.3	-	FBJL01	23	1735	1640	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683312	GCA_001494155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/155/GCA_001494155.1_CCN357	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.10489	54.7	-	FKFZ01	100	5082	4811	4/6/16	3/28/17	Scaffold	SC	SAMEA2273229	GCA_900077645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/645/GCA_900077645.1_11983_7_3	-	e745
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.36174	64.1	-	FVVD01	39	5445	5292	3/10/17	3/18/17	Contig	SC	SAMEA1972218	GCA_900139855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/855/GCA_900139855.1_10660_1_3	-	715
Pseudomonas sp. LAMO17WK12:I8	1265488	PRJEB21433	391636	Proteobacteria	Gammaproteobacteria	5.56548	62.2	-	FZOZ01	25	5171	4999	7/13/17	7/21/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05660216	GCA_900188365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/365/GCA_900188365.1_IMG-taxon_2521172536_annotated_assembly	-	LAMO17WK12:I8
Pseudomonas sp. UK4	452680	PRJNA37861	37861	Proteobacteria	Gammaproteobacteria	5.75922	60.4	-	ACOQ01	2971	6	6	5/19/09	11/6/13	Contig	Aalborg University	SAMN02391503	GCA_000174915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/915/GCA_000174915.1_ASM17491v1	-	UK4
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.08813	64.1	-	FVVC01	36	5099	4956	3/10/17	3/18/17	Contig	SC	SAMEA2156338	GCA_900139875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/875/GCA_900139875.1_10660_1_32	-	514
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.02752	54.9	-	FKGD01	59	4989	4757	4/6/16	3/28/17	Scaffold	SC	SAMEA2273231	GCA_900077655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/655/GCA_900077655.1_11983_7_5	-	e765
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.82443	31	-	FBMH01	86	1894	1777	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683382	GCA_001494175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/175/GCA_001494175.1_UNOR4451c	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.64276	67.4	-	CFYC01	1135	3718	2902	3/15/15	3/26/17	Scaffold	SC	SAMEA751128	GCA_001331395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/395/GCA_001331395.1_5515_8_1	-	B092
Enterococcus faecium	1352	PRJNA261131	261131	Terrabacteria group	Firmicutes	2.94883	36.7	-	JRUH01	117	2802	2648	10/20/14	3/24/17	Scaffold	University of Copenhagen	SAMN03069317	GCA_000767355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/355/GCA_000767355.1_70-61-3	-	70-61-3
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.95885	37.2	-	JVOB01	236	3055	2917	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197449	GCA_001056125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/125/GCA_001056125.1_ASM105612v1	26230489	258.rep1_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.72406	57.1	-	LFAC01	13	5832	5566	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280390	GCA_001033565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/565/GCA_001033565.1_Kleb_pneu_MGH91_V1	-	MGH91
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	4.97394	45.3	-	MIQZ01	101	4702	4523	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368237	GCA_001726495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/495/GCA_001726495.1_ASM172649v1	-	GCSL_R45
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.41095	28.8	-	FAMD01	298	4107	3970	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664401	GCA_900009735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/735/GCA_900009735.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA383626	383626	Proteobacteria	Gammaproteobacteria	3.97137	47.5	-	NDXP01	72	3790	3589	6/15/17	6/19/17	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN06768131	GCA_002196225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/225/GCA_002196225.1_ASM219622v1	-	114
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.07412	68.2	-	LXEC01	239	7390	6749	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208806	GCA_001981085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/085/GCA_001981085.1_ASM198108v1	-	3964b
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.86447	50.4	-	CWTN01	449	5668	4586	7/16/15	2/24/17	Scaffold	SC	SAMEA3345030	GCA_001255375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/375/GCA_001255375.1_H14090035501	-	35501ss_1
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.51657	38.1	-	LOMA01	165	3225	3010	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329983	GCA_001600905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/600/905/GCA_001600905.1_ASM160090v1	-	NY24
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.19359	40.9	-	FIJM01	79	2246	2091	2/10/16	3/19/17	Contig	SC	SAMEA1316695	GCA_900055125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/125/GCA_900055125.1_7054_7_25	-	SS1015
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.05141	35.4	-	CDCI01	88	2088	1985	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780156	GCA_001398735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/735/GCA_001398735.1_Child7	-	Child7
Acinetobacter baumannii 1546444	1310674	PRJNA194750	194750	Proteobacteria	Gammaproteobacteria	3.79553	39	-	JEXU01	140	3644	3425	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02385026	GCA_000581995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/581/995/GCA_000581995.1_ASM58199v1	-	1546444
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.4043	66.4	-	LEFY01	155	6123	5913	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566352	GCA_001037225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/225/GCA_001037225.1_ASM103722v1	-	Pae_CF67.07h
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.192	51.6	-	FEUW01	102	2548	2182	2/9/16	3/21/17	Scaffold	SC	SAMEA2673966	GCA_900022385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/385/GCA_900022385.1_14355_6_78	-	2842STDY5881227
Helicobacter pylori	210	PRJNA295617	295617	Proteobacteria	delta/epsilon subdivisions	1.62667	38.6	-	LJXK02	28	1616	1437	11/19/15	3/28/17	Contig	University of Malaya-University of Western Australia	SAMN04076428	GCA_001446395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/395/GCA_001446395.2_ASM144639v2	-	UM276R
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.24278	39.4	-	CLRW01	84	2481	2215	3/21/15	3/11/17	Contig	SC	SAMEA1028792	GCA_001096765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/765/GCA_001096765.1_6972_2_9	-	SMRU2553
Escherichia coli H730	656413	PRJNA39031	39031	Proteobacteria	Gammaproteobacteria	5.15567	50.8	-	AHWF01	10	5330	4926	4/30/12	2/22/17	Scaffold	Broad Institute	SAMN02596894	GCA_000261405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/405/GCA_000261405.1_Esch_coli_H730_V1	-	H730
Mycobacterium tuberculosis M1288	1448649	PRJNA235660	235660	Terrabacteria group	Actinobacteria	4.43804	65.5	-	JKOR01	6	4285	4095	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598995	GCA_000654975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/975/GCA_000654975.1_Myco_tube_M1288_V1	-	M1288
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.95785	37.8	-	LNNM01	25	2982	2918	12/23/15	3/1/17	Contig	FDA	SAMN02769740	GCA_001481875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/875/GCA_001481875.1_ASM148187v1	26950338	MOD1_LS267
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.67434	30.4	-	CUOU01	15	1773	1662	3/31/15	3/18/17	Contig	SC	SAMEA1010398	GCA_001237585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/585/GCA_001237585.1_7065_7_92	-	OXC6441
Salmonella enterica subsp. enterica serovar Enteritidis str. 08-1080	1192585	PRJNA168721	168721	Proteobacteria	Gammaproteobacteria	4.64756	52.1	-	ATFS01	152	4726	4503	6/25/13	2/28/17	Scaffold	The Genome Institute	SAMN02415294	GCA_000414765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/765/GCA_000414765.2_ASM41476v2	-	08-1080
Staphylococcus aureus M0711	1388478	PRJNA216649	216649	Terrabacteria group	Firmicutes	2.92078	32.9	-	JBBZ01	64	3105	2927	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325602	GCA_000528755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/755/GCA_000528755.1_Stap_aure_M0711_V1	-	M0711
Staphylococcus aureus M0713	1388479	PRJNA216650	216650	Terrabacteria group	Firmicutes	2.89739	32.9	-	JBBY01	72	3073	2902	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325603	GCA_000528775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/775/GCA_000528775.1_Stap_aure_M0713_V1	-	M0713
Salmonella enterica subsp. enterica serovar Enteritidis str. 2009K0958	1192586	PRJNA168722	168722	Proteobacteria	Gammaproteobacteria	4.70517	52	-	ATFT01	139	4811	4582	6/25/13	3/1/17	Scaffold	The Genome Institute	SAMN02415295	GCA_000414785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/785/GCA_000414785.2_ASM41478v2	-	2009K0958
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.73112	30.3	-	CUMD01	13	1837	1701	3/31/15	3/18/17	Contig	SC	SAMEA1010338	GCA_001237605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/605/GCA_001237605.1_7065_7_29	-	OXC6375
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.97076	37.8	-	LNNN01	28	3008	2923	12/23/15	3/1/17	Contig	FDA	SAMN02769741	GCA_001481885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/885/GCA_001481885.1_ASM148188v1	26950338	MOD1_LS268
Mycobacterium tuberculosis M1292	1448650	PRJNA235661	235661	Terrabacteria group	Actinobacteria	4.4197	65.6	-	JKOQ01	79	4337	4104	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598996	GCA_000654995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/654/995/GCA_000654995.1_Myco_tube_M1292_V1	-	M1292
Escherichia coli FDA505	1005471	PRJNA65755	65755	Proteobacteria	Gammaproteobacteria	5.34909	50.3	-	AKKW01	486	5788	5328	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435932	GCA_000267005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/005/GCA_000267005.2_ASM26700v2	23516226	FDA505
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04181	39.7	-	CNZQ02	219	2224	2021	3/23/15	3/11/17	Contig	SC	SAMEA1463284	GCA_001096865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/865/GCA_001096865.2_7553_5_82	-	PT8063
Helicobacter pylori	210	PRJNA295626	295626	Proteobacteria	delta/epsilon subdivisions	1.56492	38.9	-	LJXO02	18	1542	1401	11/19/15	3/28/17	Contig	University of Malaya-University of Western Australia	SAMN04076438	GCA_001446435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/435/GCA_001446435.2_ASM144643v2	-	UM137R
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15912	51.6	-	FEVS01	73	2504	2162	2/9/16	3/19/17	Scaffold	SC	SAMEA2674085	GCA_900022395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/395/GCA_900022395.1_14324_4_33	-	2842STDY5881278
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.37931	66.4	-	LEFM01	183	6153	5703	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566340	GCA_001037265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/265/GCA_001037265.1_ASM103726v1	-	Pae_CF67.06p
Acinetobacter baumannii 1526966	1310675	PRJNA194751	194751	Proteobacteria	Gammaproteobacteria	4.02565	39.1	-	JEXV01	86	3991	3744	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02385028	GCA_000582015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/015/GCA_000582015.1_ASM58201v1	-	1526966
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	1.95156	35.2	-	CDEJ01	84	1957	1853	11/5/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780157	GCA_001398755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/755/GCA_001398755.1_Mother8	-	Mother8
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.06022	41.1	-	FIRJ01	19	2074	1968	2/10/16	3/19/17	Contig	SC	SAMEA1566078	GCA_900055135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/135/GCA_900055135.1_8525_5_74	-	VS3517
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.40859	38.3	-	LOLV01	132	3145	2961	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329978	GCA_001600915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/600/915/GCA_001600915.1_ASM160091v1	-	NY19
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.92522	50.4	-	CXLV01	444	5609	4755	7/16/15	2/24/17	Scaffold	SC	SAMEA2003495	GCA_001255395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/395/GCA_001255395.1_8290_5_6	-	36314959
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.05971	68.2	-	LXEB01	178	7362	6781	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208805	GCA_001981105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/105/GCA_001981105.1_ASM198110v1	-	3013c
Vibrio cholerae	666	PRJNA383768	383768	Proteobacteria	Gammaproteobacteria	3.97984	47.6	-	NEDU01	400	3768	3606	6/15/17	6/19/17	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN06806438	GCA_002196255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/255/GCA_002196255.1_ASM219625v1	-	85
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.28219	28.4	-	FABE01	218	4064	3934	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664125	GCA_900009805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/805/GCA_900009805.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.06425	45.2	-	MIRA01	150	4847	4637	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368238	GCA_001726515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/515/GCA_001726515.1_ASM172651v1	-	GCSL_R47
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.77425	56.9	-	LFAE01	12	5801	5549	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280392	GCA_001033585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/585/GCA_001033585.1_Kleb_pneu_MGH93_V1	-	MGH93
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.01222	37.3	-	JVJB01	89	3119	2979	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197579	GCA_001056555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/555/GCA_001056555.1_ASM105655v1	26230489	388_EFLS
Enterococcus faecium	1352	PRJNA261133	261133	Terrabacteria group	Firmicutes	2.71671	37.7	-	JRUG01	69	2807	2633	10/20/14	3/24/17	Scaffold	University of Copenhagen	SAMN03069319	GCA_000767365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/767/365/GCA_000767365.1_ASM76736v1	-	70-36-8
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.72187	67.7	-	CGAD01	781	3759	3074	3/15/15	3/26/17	Scaffold	SC	SAMEA751131	GCA_001331415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/415/GCA_001331415.1_5515_7_9	-	B002
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.81574	31.1	-	FBCT01	89	1892	1758	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683128	GCA_001494215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/215/GCA_001494215.1_W17D	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.75489	55.5	-	FKGA01	39	4649	4429	4/6/16	3/28/17	Scaffold	SC	SAMEA2273230	GCA_900077665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/665/GCA_900077665.1_11983_7_4	-	e751
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.07281	64.1	-	FSNT01	13	5069	4975	12/14/16	3/21/17	Contig	SC	SAMEA2148863	GCA_900139895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/895/GCA_900139895.1_10660_1_35	-	627
Pseudomonas sp. ICMP 17674	598550	PRJDB1419	219086	Proteobacteria	Gammaproteobacteria	5.06476	63.4	-	BATF01	359	-	-	9/12/13	9/16/15	Contig	Charles Sturt University	SAMD00000759	GCA_000467045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/045/GCA_000467045.1_ASM46704v1	-	ICMP17674
Pseudomonas sp. JGI 0001012-A11	1298872	PRJNA190848	190848	Proteobacteria	Gammaproteobacteria	0.235002	56.4	-	AXWF01	38	-	-	10/25/13	7/29/15	Contig	DOE Joint Genome Institute	SAMN02440763	GCA_000484855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/855/GCA_000484855.1_ASM48485v1	-	JGI 0001012-A11
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.08879	64.3	-	FVVF01	20	5133	4990	3/10/17	3/18/17	Contig	SC	SAMEA2154241	GCA_900139905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/905/GCA_900139905.1_10660_1_34	-	635
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.74737	55	-	FKGF01	25	4580	4401	4/6/16	3/28/17	Scaffold	SC	SAMEA2273232	GCA_900077675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/675/GCA_900077675.1_11983_7_6	-	e772
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.74097	31.1	-	FBEB01	32	1840	1695	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683169	GCA_001494275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/275/GCA_001494275.1_SS_2246	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.68952	67.5	-	CGAK01	976	3748	2958	3/15/15	3/26/17	Scaffold	SC	SAMEA751132	GCA_001331435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/435/GCA_001331435.1_5515_8_3	-	B091
Enterococcus faecium	1352	PRJNA264806	264806	Terrabacteria group	Firmicutes	2.95357	37.7	-	JSVT01	151	3065	2905	11/5/14	3/24/17	Scaffold	NCTR/US FDA	SAMN03142774	GCA_000772525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/525/GCA_000772525.1_ASM77252v1	26358609	ATCC 51559
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.07533	37.1	-	JVID01	70	3159	3003	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197603	GCA_001056625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/625/GCA_001056625.1_ASM105662v1	26230489	412_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.64921	57.1	-	LFAF01	2	5535	5281	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280393	GCA_001033615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/615/GCA_001033615.1_Kleb_pneu_MGH94_V1	-	MGH94
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.04933	45.3	-	MIRB01	105	4811	4630	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN03358819	GCA_001726535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/535/GCA_001726535.1_ASM172653v1	-	GCSL_R51
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.23295	28.9	-	FAAQ01	1238	3905	3681	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664100	GCA_900010025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/025/GCA_900010025.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA383784	383784	Proteobacteria	Gammaproteobacteria	4.02982	47.5	-	NEDY01	117	-	-	6/15/17	6/15/17	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN06806559	GCA_002196275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/275/GCA_002196275.1_ASM219627v1	-	M1344
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.08235	68.2	-	LXEE01	294	7434	6731	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208808	GCA_001981125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/125/GCA_001981125.1_ASM198112v1	-	3964d
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.51551	50.9	-	CXBE01	372	4822	4303	7/17/15	2/24/17	Scaffold	SC	SAMEA954640	GCA_001255435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/435/GCA_001255435.1_5008_8_7	-	ShIB681_401083
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.40813	38.3	-	LOLU01	162	3134	2953	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329977	GCA_001600925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/600/925/GCA_001600925.1_ASM160092v1	-	NY18
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.06272	41.1	-	FIRL01	22	2075	1962	2/10/16	3/19/17	Contig	SC	SAMEA1566103	GCA_900055145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/145/GCA_900055145.1_8525_5_76	-	VS3543
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	1.95217	35.2	-	CDCK01	86	1957	1850	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780158	GCA_001398775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/775/GCA_001398775.1_Child8-1	-	Child8-1
Acinetobacter baumannii 43926	1310676	PRJNA194752	194752	Proteobacteria	Gammaproteobacteria	4.00048	39	-	JEXW01	145	3926	3649	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02385029	GCA_000582035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/035/GCA_000582035.1_ASM58203v1	-	43926
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.35544	66.3	-	LEFL01	295	6166	5575	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566339	GCA_001037275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/275/GCA_001037275.1_ASM103727v1	-	Pae_CF67.06o
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15285	51.6	-	FEXX01	74	2506	2142	2/9/16	3/21/17	Scaffold	SC	SAMEA2674530	GCA_900022405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/405/GCA_900022405.1_14355_7_64	-	2842STDY5881693
Helicobacter pylori	210	PRJNA298383	298383	Proteobacteria	delta/epsilon subdivisions	1.64891	38.5	-	LLVX02	26	1628	1458	1/4/16	3/28/17	Contig	University of Malaya-University of Western Australia	SAMN04158745	GCA_001484135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/135/GCA_001484135.2_ASM148413v2	-	UM163R
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.0877	39.7	-	CKPN01	43	2293	2065	3/21/15	3/11/17	Contig	SC	SAMEA1024717	GCA_001096885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/885/GCA_001096885.1_6680_5_5	-	SMRU917
Escherichia coli EC1863	1005548	PRJNA65965	65965	Proteobacteria	Gammaproteobacteria	5.37551	50.3	-	AKMQ01	370	5822	5356	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435978	GCA_000267205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/205/GCA_000267205.2_ASM26720v2	-	EC1863
Mycobacterium tuberculosis M1294	1448651	PRJNA235662	235662	Terrabacteria group	Actinobacteria	4.41485	65.6	-	JKOP01	87	4318	4102	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598997	GCA_000655015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/015/GCA_000655015.1_Myco_tube_M1294_V1	-	M1294
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.95914	37.8	-	LNNO01	25	3005	2916	12/23/15	3/1/17	Contig	FDA	SAMN02769742	GCA_001481915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/915/GCA_001481915.1_ASM148191v1	26950338	MOD1_LS269
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.61222	30.4	-	CULP01	12	1686	1580	3/31/15	3/18/17	Contig	SC	SAMEA1010268	GCA_001237645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/645/GCA_001237645.1_7065_7_17	-	OXC6363
Salmonella enterica subsp. enterica serovar Enteritidis str. 2009K1651	1192587	PRJNA168723	168723	Proteobacteria	Gammaproteobacteria	4.61508	52.1	-	ATFU01	141	4683	4466	6/25/13	3/1/17	Scaffold	The Genome Institute	SAMN02415296	GCA_000414805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/805/GCA_000414805.2_ASM41480v2	-	2009K1651
Staphylococcus aureus M0715	1388480	PRJNA216651	216651	Terrabacteria group	Firmicutes	2.80347	32.8	-	JBBX01	43	2918	2720	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325604	GCA_000528795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/795/GCA_000528795.1_Stap_aure_M0715_V1	-	M0715
Staphylococcus aureus M0716	1388481	PRJNA216652	216652	Terrabacteria group	Firmicutes	2.86879	32.8	-	JBBW01	43	3031	2862	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325605	GCA_000528815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/815/GCA_000528815.1_Stap_aure_M0716_V1	-	M0716
Salmonella enterica subsp. enterica serovar Enteritidis str. 2009K1726	1192588	PRJNA168724	168724	Proteobacteria	Gammaproteobacteria	4.72483	52	-	ATFV01	156	4826	4594	6/25/13	3/1/17	Scaffold	The Genome Institute	SAMN02415297	GCA_000414825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/825/GCA_000414825.2_ASM41482v2	-	2009K1726
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.73826	30.3	-	CUQQ01	13	1856	1734	3/31/15	3/18/17	Contig	SC	SAMEA1010460	GCA_001237745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/745/GCA_001237745.1_7092_1_5	-	OXC6451
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.96284	37.8	-	LNNP01	20	3005	2922	12/23/15	3/1/17	Contig	FDA	SAMN02769743	GCA_001481935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/935/GCA_001481935.1_ASM148193v1	26950338	MOD1_LS270
Mycobacterium tuberculosis M1295	1448652	PRJNA235663	235663	Terrabacteria group	Actinobacteria	4.43101	65.5	-	JKOO01	6	4280	4092	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598998	GCA_000655035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/035/GCA_000655035.1_Myco_tube_M1295_V1	-	M1295
Escherichia coli EC1845	1005540	PRJNA65949	65949	Proteobacteria	Gammaproteobacteria	5.36225	50.3	-	AKMP01	486	5848	5358	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435956	GCA_000267225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/225/GCA_000267225.2_ASM26722v2	-	EC1845
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00597	39.7	-	COAM02	109	2178	1982	3/22/15	3/11/17	Contig	SC	SAMEA1463195	GCA_001097025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/025/GCA_001097025.2_7622_2_13	-	BR1039
Helicobacter pylori	210	PRJNA298381	298381	Proteobacteria	delta/epsilon subdivisions	1.64849	38.5	-	LLVW02	25	1623	1460	1/4/16	3/28/17	Contig	University of Malaya-University of Western Australia	SAMN04158716	GCA_001484155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/155/GCA_001484155.2_ASM148415v2	-	UM163S
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12643	51.7	-	FEZL01	87	2480	2162	2/9/16	3/19/17	Scaffold	SC	SAMEA2674188	GCA_900022415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/415/GCA_900022415.1_14555_5_29	-	2842STDY5881370
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.4063	66.4	-	LEGH01	106	6128	5937	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566361	GCA_001037355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/355/GCA_001037355.1_ASM103735v1	-	Pae_CF67.07q
Acinetobacter baumannii 1291820	1310654	PRJNA194730	194730	Proteobacteria	Gammaproteobacteria	4.09917	39	-	JEXK01	205	4086	3812	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02384922	GCA_000582115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/115/GCA_000582115.1_ASM58211v1	-	1291820
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	1.95886	35.2	-	CDCL01	144	1965	1853	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780159	GCA_001398795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/795/GCA_001398795.1_Child8-2	-	Child8-2
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05876	41.1	-	FIRN01	20	2070	1963	2/10/16	3/19/17	Contig	SC	SAMEA1566080	GCA_900055155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/155/GCA_900055155.1_8525_5_78	-	VS3575
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.51214	38.2	-	LOLZ01	183	3218	3003	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329982	GCA_001600975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/600/975/GCA_001600975.1_ASM160097v1	-	NY23
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.83427	50.8	-	CWWD01	449	5444	4673	7/16/15	2/24/17	Scaffold	SC	SAMEA3345089	GCA_001255455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/455/GCA_001255455.1_Sg_201401879_GGTAGC_L001	-	201401879_1
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.08927	68.2	-	LXED01	213	7391	6775	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208807	GCA_001981135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/135/GCA_001981135.1_ASM198113v1	-	3964c
Vibrio cholerae	666	PRJNA383770	383770	Proteobacteria	Gammaproteobacteria	3.98404	47.6	-	NEDW01	126	3797	3587	6/15/17	6/19/17	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN06806440	GCA_002196305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/305/GCA_002196305.1_ASM219630v1	-	433
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.15785	28.4	-	FACK01	535	3846	3707	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664153	GCA_900010125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/125/GCA_900010125.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.1891	45.1	-	MIRC01	86	4849	4711	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368239	GCA_001726565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/565/GCA_001726565.1_ASM172656v1	-	GCSL_R52
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.73202	57	-	LFAG01	11	5820	5554	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280394	GCA_001033645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/645/GCA_001033645.1_Kleb_pneu_MGH95_V1	-	MGH95
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.19108	37.1	-	JVHL01	101	3310	3113	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197621	GCA_001056735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/735/GCA_001056735.1_ASM105673v1	26230489	428_EFLS
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.97884	37.7	-	JVZH01	466	3066	2892	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197157	GCA_001052395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/395/GCA_001052395.1_ASM105239v1	26230489	1197_EFCM
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.8153	67.9	-	CGAI01	337	3682	3312	3/15/15	3/26/17	Scaffold	SC	SAMEA751134	GCA_001331475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/475/GCA_001331475.1_5633_2_6	-	B012
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.87032	30.9	-	FBAI01	71	1970	1842	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683071	GCA_001494295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/295/GCA_001494295.1_H132760143	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.10845	55	-	FKGG01	73	5021	4779	4/6/16	3/28/17	Scaffold	SC	SAMEA2273234	GCA_900077685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/685/GCA_900077685.1_11983_7_9	-	e774
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.83648	64.2	-	FVVI01	10	4791	4682	3/10/17	3/18/17	Contig	SC	SAMEA2161018	GCA_900139925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/925/GCA_900139925.1_10660_1_42	-	531
Pseudomonas sp. BAY1663	1439940	PRJNA232351	232351	Proteobacteria	Gammaproteobacteria	4.86529	65	-	AZSV01	221	5106	5054	2/26/14	2/26/14	Contig	Bay Zoltan Nonprofit Ltd for Applied Research	SAMN02469298	GCA_000582595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/595/GCA_000582595.1_BAY1662_2	-	BAY1663
Pseudomonas sp. 1-7	633150	PRJNA257119	257119	Proteobacteria	Gammaproteobacteria	4.93101	62	-	JPRQ01	73	4483	4094	8/21/14	10/21/14	Contig	Chinese Academy of Agricultural sciences	SAMN02947409	GCA_000742775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/775/GCA_000742775.1_ASM74277v1	25278536	7-Jan
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98475	64.1	-	FVVH01	16	4918	4806	3/10/17	3/18/17	Contig	SC	SAMEA2163108	GCA_900139945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/945/GCA_900139945.1_10660_1_44	-	534
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.16327	55.4	-	FKGE01	82	5182	4862	4/6/16	3/28/17	Scaffold	SC	SAMEA2273233	GCA_900077695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/695/GCA_900077695.1_11983_7_7	-	e773
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65989	31.4	-	FBIS01	27	1722	1631	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683293	GCA_001494315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/315/GCA_001494315.1_EC3385	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.76739	67.7	-	CGHM01	638	3786	3154	3/15/15	3/26/17	Scaffold	SC	SAMEA751137	GCA_001331495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/495/GCA_001331495.1_5515_5_5	-	B111
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.99878	37.7	-	JVZB01	363	3056	2911	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197163	GCA_001052405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/405/GCA_001052405.1_ASM105240v1	26230489	1201_EFCM
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.23003	37.2	-	JVDH01	161	3406	3208	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197729	GCA_001057145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/145/GCA_001057145.1_ASM105714v1	26230489	533_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.51156	57.2	-	LFAI01	10	5509	5249	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280396	GCA_001033675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/675/GCA_001033675.1_Kleb_pneu_MGH97_V1	-	MGH97
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.19161	45.1	-	MIRD01	101	4858	4710	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368240	GCA_001726575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/575/GCA_001726575.1_ASM172657v1	-	GCSL_R53
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.3917	28.6	-	FAHV01	1194	4061	3859	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664288	GCA_900010135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/135/GCA_900010135.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA383773	383773	Proteobacteria	Gammaproteobacteria	3.95179	47.5	-	NEDX01	139	3792	3275	6/15/17	8/4/17	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN06806481	GCA_002196335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/335/GCA_002196335.1_ASM219633v1	-	M1030
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.13743	68.2	-	LXEF01	247	7402	6797	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208809	GCA_001981165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/165/GCA_001981165.1_ASM198116v1	-	4095a
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.94953	50.4	-	CXLX01	447	5623	4749	7/16/15	2/24/17	Scaffold	SC	SAMEA2004000	GCA_001255475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/475/GCA_001255475.1_8290_5_7	-	36860531
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.42829	38.3	-	LOMG01	641	3221	2841	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329989	GCA_001600985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/600/985/GCA_001600985.1_ASM160098v1	-	NY30
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	1.99792	41.4	-	FIGP01	34	2002	1852	2/10/16	3/19/17	Contig	SC	SAMEA1316686	GCA_900055485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/485/GCA_900055485.1_7114_5_47	-	LSS47
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	1.98298	35.2	-	CDEC01	82	2016	1929	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780160	GCA_001398815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/815/GCA_001398815.1_Mother9	-	Mother9
Acinetobacter baumannii 50595	1310662	PRJNA194738	194738	Proteobacteria	Gammaproteobacteria	4.02687	38.9	-	JEXP01	219	4062	3757	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02384926	GCA_000582155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/155/GCA_000582155.1_ASM58215v1	-	50595
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.48617	66.4	-	JUSS01	372	6302	5957	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03198004	GCA_001067395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/395/GCA_001067395.1_ASM106739v1	26230489	792_PAER
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16669	51.5	-	FEZR01	84	2504	2135	2/9/16	3/21/17	Scaffold	SC	SAMEA2674209	GCA_900022425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/425/GCA_900022425.1_14555_5_35	-	2842STDY5881376
Helicobacter pylori	210	PRJNA298387	298387	Proteobacteria	delta/epsilon subdivisions	1.61665	39	-	LLVY02	26	1595	1438	1/4/16	3/28/17	Contig	University of Malaya-University of Western Australia	SAMN04158749	GCA_001484185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/185/GCA_001484185.2_ASM148418v2	-	UM400AS
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.11452	39.8	-	CMVK01	73	2246	1973	3/23/15	3/11/17	Contig	SC	SAMEA1022884	GCA_001097085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/085/GCA_001097085.1_5750_2_7	-	247
Escherichia coli EC4448	1005534	PRJNA65937	65937	Proteobacteria	Gammaproteobacteria	5.49152	50.2	-	AKMM01	500	6013	5506	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435931	GCA_000267245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/245/GCA_000267245.2_ASM26724v2	23516226	EC4448
Mycobacterium tuberculosis M1300	1448653	PRJNA235664	235664	Terrabacteria group	Actinobacteria	4.43909	65.5	-	JKON01	6	4290	4104	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02598999	GCA_000655055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/055/GCA_000655055.1_Myco_tube_M1300_V1	-	M1300
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	3.10863	37.8	-	LNNQ01	28	3242	3141	12/23/15	3/1/17	Contig	FDA	SAMN02769744	GCA_001481955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/955/GCA_001481955.1_ASM148195v1	26950338	MOD1_LS271
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.74486	30.2	-	CUQD01	24	1827	1645	3/31/15	4/10/17	Contig	SC	SAMEA1010350	GCA_001237885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/885/GCA_001237885.1_7092_1_38	-	OXC6485
Salmonella enterica subsp. enterica serovar Enteritidis str. 2010K-0262	1192589	PRJNA168725	168725	Proteobacteria	Gammaproteobacteria	4.6715	52.1	-	ATFW01	149	4768	4543	6/25/13	3/1/17	Scaffold	The Genome Institute	SAMN02415298	GCA_000414845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/845/GCA_000414845.2_ASM41484v2	-	2010K-0262
Staphylococcus aureus M0718	1388482	PRJNA216654	216654	Terrabacteria group	Firmicutes	2.89284	32.9	-	JBBV01	48	3040	2866	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325606	GCA_000528835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/835/GCA_000528835.1_Stap_aure_M0718_V1	-	M0718
Staphylococcus aureus M0720	1388483	PRJNA216655	216655	Terrabacteria group	Firmicutes	2.86559	32.8	-	JBBU01	37	3035	2863	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325607	GCA_000528855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/855/GCA_000528855.1_Stap_aure_M0720_V1	-	M0720
Salmonella enterica subsp. enterica serovar Enteritidis str. 2010K-0267	1192590	PRJNA168726	168726	Proteobacteria	Gammaproteobacteria	4.71891	52	-	ATFX01	144	4839	4605	6/25/13	3/1/17	Scaffold	The Genome Institute	SAMN02415299	GCA_000414865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/865/GCA_000414865.2_ASM41486v2	-	2010K-0267
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.71019	30.4	-	CUQO01	17	1804	1708	3/31/15	3/18/17	Contig	SC	SAMEA1010282	GCA_001237965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/965/GCA_001237965.1_7092_1_48	-	OXC6495
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	3.00773	37.8	-	LNNR01	45	3080	2988	12/23/15	3/1/17	Contig	FDA	SAMN02769745	GCA_001481965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/965/GCA_001481965.1_ASM148196v1	26950338	MOD1_LS272
Mycobacterium tuberculosis M1304	1448654	PRJNA235665	235665	Terrabacteria group	Actinobacteria	4.42492	65.6	-	JKOM01	5	4286	4102	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599000	GCA_000655075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/075/GCA_000655075.1_Myco_tube_M1304_V1	-	M1304
Escherichia coli EC4437	1005533	PRJNA65935	65935	Proteobacteria	Gammaproteobacteria	5.40366	50.2	-	AKML01	372	5846	5383	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435975	GCA_000267265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/265/GCA_000267265.2_ASM26726v2	-	EC4437
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.02157	39.6	-	CMLD01	42	2202	1965	3/23/15	3/11/17	Contig	SC	SAMEA1029207	GCA_001097125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/125/GCA_001097125.1_7054_5_23	-	SMRU3071
Helicobacter pylori	210	PRJNA295642	295642	Proteobacteria	delta/epsilon subdivisions	1.56785	38.9	-	LJXQ02	24	1538	1390	1/25/16	3/28/17	Contig	University of Malaya-University of Western Australia	SAMN04087215	GCA_001538305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/538/305/GCA_001538305.2_ASM153830v2	-	UM233R
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16256	51.6	-	FFAF01	80	2512	2171	2/9/16	3/19/17	Scaffold	SC	SAMEA2674238	GCA_900022435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/435/GCA_900022435.1_14555_5_49	-	2842STDY5881390
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.91004	66	-	JUKP01	356	6703	6404	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03198215	GCA_001068395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/395/GCA_001068395.1_ASM106839v1	26230489	993_PAER
Acinetobacter baumannii 1525283	1310665	PRJNA194741	194741	Proteobacteria	Gammaproteobacteria	3.97437	39.1	-	JEXR01	185	3864	3625	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02384928	GCA_000582175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/175/GCA_000582175.1_ASM58217v1	-	1525283
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	1.98134	35.2	-	CDEM01	74	2011	1923	11/5/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780161	GCA_001398835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/835/GCA_001398835.1_Child9	-	Child9
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.27286	41.2	-	FIGO01	36	2284	2147	2/10/16	3/19/17	Contig	SC	SAMEA1316627	GCA_900055495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/495/GCA_900055495.1_7114_5_48	-	LSS48
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.48914	38.4	-	LOMC01	884	3320	2911	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329985	GCA_001600995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/600/995/GCA_001600995.1_ASM160099v1	-	NY26
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.73704	50.6	-	CWXQ01	463	5334	4479	7/17/15	2/24/17	Scaffold	SC	SAMEA2434369	GCA_001255515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/515/GCA_001255515.1_12850_1_42	-	KY 276
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.06814	68.2	-	LXEG01	154	7356	6814	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208810	GCA_001981185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/185/GCA_001981185.1_ASM198118v1	-	4226b
Vibrio cholerae	666	PRJNA383788	383788	Proteobacteria	Gammaproteobacteria	4.00529	47.6	-	NEEB01	271	3836	3622	6/15/17	6/19/17	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN06806565	GCA_002196375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/375/GCA_002196375.1_ASM219637v1	-	M1337
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.35716	29.3	-	FAOI01	1865	3909	3632	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664457	GCA_900010145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/145/GCA_900010145.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.18949	45.1	-	MIRE01	96	4860	4711	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368241	GCA_001726595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/595/GCA_001726595.1_ASM172659v1	-	GCSL_R54
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.31047	57.6	-	LFAJ01	21	5002	4699	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280397	GCA_001033685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/685/GCA_001033685.1_Kleb_pneu_MGH98_V1	-	MGH98
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.85333	37.5	-	JVBD01	104	2863	2757	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197785	GCA_001057435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/435/GCA_001057435.1_ASM105743v1	26230489	584_EFLS
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.98132	37.7	-	JVYZ01	439	3059	2901	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197165	GCA_001052435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/435/GCA_001052435.1_ASM105243v1	26230489	1203_EFCM
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.81767	67.9	-	CFKX01	281	3667	3296	3/15/15	3/26/17	Scaffold	SC	SAMEA751138	GCA_001331515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/515/GCA_001331515.1_5515_5_6	-	B121
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.6417	31.4	-	FBQA01	15	1693	1605	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683481	GCA_001494335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/335/GCA_001494335.1_H132480140	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.16178	54.9	-	FKGI01	45	5080	4844	4/6/16	3/28/17	Scaffold	SC	SAMEA2273127	GCA_900077705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/705/GCA_900077705.1_12045_4_6	-	e78
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18749	64.2	-	FSNX01	32	5187	5047	12/14/16	3/21/17	Contig	SC	SAMEA2160639	GCA_900139965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/965/GCA_900139965.1_10660_1_46	-	590
Pseudomonas sp. BICA1-14	1619235	PRJNA257561	257561	Proteobacteria	Gammaproteobacteria	6.57962	62.1	-	JUEC02	175	6228	5990	12/16/14	7/2/15	Contig	EPFL	SAMN02953435	GCA_000802035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/035/GCA_000802035.2_cluster_c5	-	-
Pseudomonas sp. BRH_c35	1629711	PRJNA257561	257561	Proteobacteria	Gammaproteobacteria	3.13815	61.1	-	LADX01	296	3263	3110	3/24/15	3/24/15	Contig	EPFL	SAMN03400154	GCA_000961835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/835/GCA_000961835.1_41k	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.36138	64.1	-	FVVM01	47	5450	5294	3/10/17	3/18/17	Contig	SC	SAMEA2161499	GCA_900140035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/035/GCA_900140035.1_10660_1_7	-	714
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.05646	55.3	-	FKGM01	35	4989	4752	4/6/16	3/28/17	Scaffold	SC	SAMEA2273237	GCA_900077715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/715/GCA_900077715.1_11983_7_12	-	e795
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.94714	30.8	-	FBGN01	120	1988	1814	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683226	GCA_001494375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/375/GCA_001494375.1_1718	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.7733	67.7	-	CGAA01	696	3788	3142	3/15/15	3/26/17	Scaffold	SC	SAMEA751139	GCA_001331535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/535/GCA_001331535.1_5515_5_3	-	B123
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.02663	37.7	-	JVXT01	293	3120	2951	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197197	GCA_001052485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/485/GCA_001052485.1_ASM105248v1	26230489	1232_EFCM
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.00262	37.2	-	JVAN01	230	3134	2953	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197801	GCA_001057475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/475/GCA_001057475.1_ASM105747v1	26230489	600_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.49451	57.3	-	LFAK01	6	5489	5193	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280398	GCA_001033725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/725/GCA_001033725.1_Kleb_pneu_MGH101_V1	-	MGH101
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.19169	45.1	-	MIRF01	100	4858	4711	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368242	GCA_001726615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/615/GCA_001726615.1_ASM172661v1	-	GCSL_R55
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.32556	28.7	-	FABD01	1260	3992	3774	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664117	GCA_900010335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/335/GCA_900010335.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA383787	383787	Proteobacteria	Gammaproteobacteria	3.98521	47.5	-	NEEA01	142	-	-	6/15/17	6/15/17	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN06806563	GCA_002196395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/395/GCA_002196395.1_ASM219639v1	-	34Kayum
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.06966	68.3	-	LXEH01	167	7361	6820	1/31/17	3/29/17	Contig	Northern Arizona University	SAMN04208811	GCA_001981195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/195/GCA_001981195.1_ASM198119v1	-	4226c
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.63525	50.6	-	CXES01	407	4993	4417	7/17/15	2/24/17	Scaffold	SC	SAMEA954544	GCA_001255535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/535/GCA_001255535.1_5417_2_8	-	19904011_1361399
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.52818	38.3	-	LOMB01	708	3350	3006	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329984	GCA_001601005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/005/GCA_001601005.1_ASM160100v1	-	NY25
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.057	41.1	-	FIRF01	21	2070	1962	2/10/16	3/19/17	Contig	SC	SAMEA1566047	GCA_900055505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/505/GCA_900055505.1_8525_5_70	-	VS329
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.02859	35.3	-	CDDN01	84	2081	1985	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780162	GCA_001398855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/855/GCA_001398855.1_Mother10-1	-	Mother10-1
Acinetobacter baumannii 1552865	1310679	PRJNA194755	194755	Proteobacteria	Gammaproteobacteria	4.00693	39	-	JEXY01	120	4000	3728	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02385032	GCA_000582215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/215/GCA_000582215.1_ASM58221v1	-	1552865
Pseudomonas aeruginosa	287	PRJNA295322	295322	Proteobacteria	Gammaproteobacteria	6.30505	66.6	-	LLKP01	145	6072	5736	10/22/15	3/18/17	Scaffold	"Instituto de Investigaciones Biomedicas, UNAM"	SAMN04045728	GCA_001402955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/955/GCA_001402955.1_ASM140295v1	-	ATCC 9027
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12643	51.7	-	FFBH01	73	2493	2155	2/9/16	3/19/17	Scaffold	SC	SAMEA2674296	GCA_900022445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/445/GCA_900022445.1_14555_5_78	-	2842STDY5881419
Helicobacter pylori	210	PRJNA298384	298384	Proteobacteria	delta/epsilon subdivisions	1.58963	38.7	-	LQNA02	35	1581	1405	1/28/16	3/28/17	Contig	University of Malaya-University of Western Australia	SAMN04158747	GCA_001542385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/385/GCA_001542385.2_ASM154238v2	-	UM303S
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08566	39.5	-	COAS02	225	2237	2033	3/23/15	3/11/17	Contig	SC	SAMEA1463126	GCA_001097305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/305/GCA_001097305.2_7622_2_20	-	BR1064
Escherichia coli EC4436	1005532	PRJNA65933	65933	Proteobacteria	Gammaproteobacteria	5.41194	50.2	-	AKMK01	422	5862	5396	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435985	GCA_000267285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/285/GCA_000267285.2_ASM26728v2	23516226	EC4436
Mycobacterium tuberculosis XTB13-180	1427259	PRJNA229655	229655	Terrabacteria group	Actinobacteria	4.42282	65.6	-	JLJK01	4	4310	4102	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419615	GCA_000655095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/095/GCA_000655095.1_Myco_tube_XTB13-180_V1	-	XTB13-180
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.95805	37.8	-	LNNS01	33	3008	2916	12/23/15	3/1/17	Contig	FDA	SAMN02769748	GCA_001481995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/995/GCA_001481995.1_ASM148199v1	26950338	MOD1_LS275
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.6761	30.3	-	CUIR01	17	1758	1667	3/31/15	3/18/17	Contig	SC	SAMEA1010257	GCA_001238065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/065/GCA_001238065.1_7038_3_36	-	OXC6286
Salmonella enterica subsp. enterica serovar Enteritidis str. 2010K-0271	1192591	PRJNA168727	168727	Proteobacteria	Gammaproteobacteria	4.7231	52.1	-	ATFY01	148	4840	4603	6/25/13	3/1/17	Scaffold	The Genome Institute	SAMN02415300	GCA_000414885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/885/GCA_000414885.2_ASM41488v2	-	2010K-0271
Staphylococcus aureus M0721	1388484	PRJNA216657	216657	Terrabacteria group	Firmicutes	2.86073	32.8	-	JBBT01	47	3029	2859	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325608	GCA_000528875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/875/GCA_000528875.1_Stap_aure_M0721_V1	-	M0721
Staphylococcus aureus M0722	1388485	PRJNA216658	216658	Terrabacteria group	Firmicutes	2.90787	32.9	-	JBBS01	53	3089	2906	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325609	GCA_000528895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/895/GCA_000528895.1_Stap_aure_M0722_V1	-	M0722
Salmonella enterica subsp. enterica serovar Enteritidis str. 2010K-0284	1192592	PRJNA168728	168728	Proteobacteria	Gammaproteobacteria	4.72624	52.1	-	ATFZ01	146	4826	4594	6/25/13	3/1/17	Scaffold	The Genome Institute	SAMN02415301	GCA_000414905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/905/GCA_000414905.2_ASM41490v2	-	2010K-0284
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.61239	30.5	-	CUVJ01	21	1678	1586	3/31/15	3/18/17	Contig	SC	SAMEA1400878	GCA_001238125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/125/GCA_001238125.1_7213_3_79	-	OXC6624
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.9587	37.8	-	LNNT01	22	3001	2915	12/23/15	3/1/17	Contig	FDA	SAMN02769749	GCA_001482015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/015/GCA_001482015.1_ASM148201v1	26950338	MOD1_LS276
Mycobacterium tuberculosis XTB13-182	1427260	PRJNA229656	229656	Terrabacteria group	Actinobacteria	4.41836	65.6	-	JLJJ01	9	4310	4108	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419616	GCA_000655115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/115/GCA_000655115.1_Myco_tube_XTB13-182_V1	-	XTB13-182
Escherichia coli EC4439	1005531	PRJNA65931	65931	Proteobacteria	Gammaproteobacteria	5.39756	50.2	-	AKMJ01	489	5888	5414	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435930	GCA_000267305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/305/GCA_000267305.2_ASM26730v2	23516226	EC4439
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.02589	39.8	-	CPNI01	58	2226	1998	3/23/15	3/4/17	Contig	SC	SAMEA1020608	GCA_001097345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/345/GCA_001097345.1_5901_7_3	-	8312-05
Helicobacter pylori	210	PRJNA298385	298385	Proteobacteria	delta/epsilon subdivisions	1.58983	38.7	-	LQNB02	30	1579	1408	1/28/16	3/28/17	Contig	University of Malaya-University of Western Australia	SAMN04158748	GCA_001542465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/465/GCA_001542465.2_ASM154246v2	-	UM303R
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.20695	51.6	-	FFCX01	93	2567	2222	2/9/16	3/19/17	Scaffold	SC	SAMEA2674196	GCA_900022455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/455/GCA_900022455.1_14555_6_25	-	2842STDY5881462
Pseudomonas aeruginosa	287	PRJNA297686	297686	Proteobacteria	Gammaproteobacteria	6.36753	66.5	-	LKPT01	11	6019	5835	10/26/15	3/18/17	Scaffold	Oklahoma State Universtiy	SAMN04128839	GCA_001414085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/085/GCA_001414085.1_ASM141408v1	26823574	14650
Acinetobacter baumannii 397971	1310686	PRJNA194762	194762	Proteobacteria	Gammaproteobacteria	3.9508	39	-	JEYD01	44	3806	3563	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02385037	GCA_000582275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/275/GCA_000582275.1_ASM58227v1	-	397971
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.02589	35.3	-	CDED01	69	2077	1984	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780163	GCA_001398875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/875/GCA_001398875.1_Mother10-2	-	Mother10-2
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05728	41.1	-	FIRM01	22	2069	1960	2/10/16	3/19/17	Contig	SC	SAMEA1566095	GCA_900055515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/515/GCA_900055515.1_8525_5_77	-	VS3569
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.41101	38.3	-	LOLT01	135	3139	2972	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329976	GCA_001601055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/055/GCA_001601055.1_ASM160105v1	-	NY17
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.75779	50.3	-	CWSV01	387	5596	4420	7/16/15	2/24/17	Scaffold	SC	SAMEA3345013	GCA_001255555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/555/GCA_001255555.1_H14052014601	-	14601ss_1
Burkholderia pseudomallei	28450	PRJNA352974	352974	Proteobacteria	Betaproteobacteria	7.14916	68.1	-	MPSL01	119	7446	6842	4/27/17	7/3/17	Contig	Centers for Disease Control and Prevention	SAMN06007575	GCA_002113945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/113/945/GCA_002113945.1_ASM211394v1	28628442	2014002816
Vibrio cholerae	666	PRJNA376794	376794	Proteobacteria	Gammaproteobacteria	3.86675	47.9	-	MWRC01	972	3704	3341	6/21/17	6/24/17	Contig	RARI	SAMN06446879	GCA_002204075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/075/GCA_002204075.1_ASM220407v1	-	39
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.20235	28.6	-	FABO01	339	3906	3774	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664130	GCA_900010345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/345/GCA_900010345.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.10077	45.3	-	MIRH01	101	4838	4656	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368244	GCA_001726645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/645/GCA_001726645.1_ASM172664v1	-	GCSL_R57
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.46625	57.3	-	LFAL01	9	5444	5196	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280399	GCA_001033745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/745/GCA_001033745.1_Kleb_pneu_MGH102_V1	-	MGH102
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.88817	37.4	-	JUZT01	140	2902	2772	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197821	GCA_001057625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/625/GCA_001057625.1_ASM105762v1	26230489	621_EFLS
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.84694	37.7	-	JWEU01	277	2888	2749	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197014	GCA_001052685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/685/GCA_001052685.1_ASM105268v1	26230489	1048.rep1_EFCM
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.84523	67.8	-	CFXR01	552	3785	3280	3/15/15	3/26/17	Scaffold	SC	SAMEA751143	GCA_001331555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/555/GCA_001331555.1_5633_2_9	-	B080
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.59041	31.8	-	FBID01	34	1584	1521	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683270	GCA_001494395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/395/GCA_001494395.1_SWAN264	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.05716	55.6	-	FKGK01	66	5077	4816	4/6/16	3/28/17	Scaffold	SC	SAMEA2273236	GCA_900077725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/725/GCA_900077725.1_11983_7_11	-	e794
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.27008	64.1	-	FSOC01	24	5335	5215	12/14/16	3/21/17	Contig	SC	SAMEA2146898	GCA_900140095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/095/GCA_900140095.1_10660_1_9	-	664
Pseudomonas sp. Ga0074129	1752219	PRJNA301005	301005	Proteobacteria	Gammaproteobacteria	4.01736	58.6	-	LNDO01	124	-	-	12/9/15	12/9/15	Contig	University of Glasgow	SAMN04254482	GCA_001465025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/465/025/GCA_001465025.1_Pseudomonas_sp._Ga0074129	-	-
Pseudomonas sp. ABAC21	1230462	PRJNA295869	295869	Proteobacteria	Gammaproteobacteria	5.86456	60.8	-	LKBL01	2861	5377	4149	12/15/15	12/15/15	Contig	New Zealand Institute for Plant & Food research	SAMN04092562	GCA_001467155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/155/GCA_001467155.1_ASM146715v1	-	ABAC21
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.41798	64.1	-	FSOG01	69	5588	5368	12/14/16	3/21/17	Contig	SC	SAMEA2149411	GCA_900140105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/105/GCA_900140105.1_10665_2_67	-	521
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.86195	55.4	-	FKGH01	40	4765	4543	4/6/16	3/28/17	Scaffold	SC	SAMEA2273235	GCA_900077735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/735/GCA_900077735.1_11983_7_10	-	e783
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68589	31.3	-	FAXX01	17	1752	1655	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683024	GCA_001494415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/415/GCA_001494415.1_p568B	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.85363	67.9	-	CIJJ01	455	3757	3309	4/21/15	3/26/17	Scaffold	SC	SAMEA751144	GCA_001331575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/575/GCA_001331575.1_5633_2_8	-	B079
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.0056	37.7	-	JVXU01	332	3077	2925	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197196	GCA_001053135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/135/GCA_001053135.1_ASM105313v1	26230489	1231_EFCM
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.97827	37.2	-	JUYS01	248	3039	2851	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197848	GCA_001057765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/765/GCA_001057765.1_ASM105776v1	26230489	647_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.90783	56.8	-	LFAM01	13	5940	5612	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280400	GCA_001033755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/755/GCA_001033755.1_Kleb_pneu_MGH111_V1	-	MGH111
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.19119	45.1	-	MIRG01	101	4859	4708	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368243	GCA_001726655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/655/GCA_001726655.1_ASM172665v1	-	GCSL_R56
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.18676	28.8	-	FABY01	770	3796	3646	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664136	GCA_900010355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/355/GCA_900010355.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA376800	376800	Proteobacteria	Gammaproteobacteria	3.89251	47.6	-	MWRF01	373	3734	3429	6/21/17	6/24/17	Contig	RARI	SAMN06447201	GCA_002204085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/085/GCA_002204085.1_ASM220408v1	-	866
Burkholderia pseudomallei	28450	PRJNA352974	352974	Proteobacteria	Betaproteobacteria	7.25367	68.1	-	NBVM01	3	7443	6834	4/28/17	5/3/17	Contig	Centers for Disease Control and Prevention	SAMN06007560	GCA_002115385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/385/GCA_002115385.1_ASM211538v1	28628442	2008724644
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.63419	50.5	-	CWSY01	423	5295	4372	7/16/15	2/24/17	Scaffold	SC	SAMEA3345011	GCA_001255595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/595/GCA_001255595.1_H14060002901	-	02901ss_1
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.47427	38.3	-	LOMD01	714	3268	2898	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329986	GCA_001601075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/075/GCA_001601075.1_ASM160107v1	-	NY27
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05779	41.1	-	FIRP01	24	2061	1964	2/10/16	3/19/17	Contig	SC	SAMEA1566059	GCA_900055525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/525/GCA_900055525.1_8525_5_80	-	VS3640
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.02314	35.3	-	CDEF01	54	2071	1986	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780164	GCA_001398895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/895/GCA_001398895.1_Child10	-	Child10
Acinetobacter baumannii 42887	1310691	PRJNA194767	194767	Proteobacteria	Gammaproteobacteria	3.9497	39	-	JEYG01	54	3769	3538	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02385039	GCA_000582295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/295/GCA_000582295.1_ASM58229v1	-	42887
Pseudomonas aeruginosa	287	PRJNA297686	297686	Proteobacteria	Gammaproteobacteria	6.2272	66.5	-	LKPS01	15	5910	5725	10/26/15	3/18/17	Scaffold	Oklahoma State Universtiy	SAMN04128838	GCA_001414105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/105/GCA_001414105.1_ASM141410v1	26823574	14649
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.19948	51.6	-	FEQU01	87	2557	2186	2/9/16	3/21/17	Scaffold	SC	SAMEA2674473	GCA_900024325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/325/GCA_900024325.1_14355_8_19	-	2842STDY5881744
Helicobacter pylori	210	PRJNA298420	298420	Proteobacteria	delta/epsilon subdivisions	1.6347	38.6	-	LQNE02	33	1637	1461	1/28/16	3/28/17	Contig	University of Malaya-University of Western Australia	SAMN04159053	GCA_001542495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/495/GCA_001542495.2_ASM154249v2	-	UM443R
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	1.96093	39.8	-	CMLH01	43	2160	1948	3/23/15	3/4/17	Contig	SC	SAMEA1029271	GCA_001097445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/445/GCA_001097445.1_7054_5_4	-	SMRU3052
Escherichia coli EC4402	1005530	PRJNA65929	65929	Proteobacteria	Gammaproteobacteria	5.45481	50.3	-	AKMI01	654	5991	5425	6/12/12	2/22/17	Scaffold	Institute for Genome Sciences	SAMN02435929	GCA_000267325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/325/GCA_000267325.1_ASM26732v1	23516226	EC4402
Mycobacterium tuberculosis XTB13-183	1427261	PRJNA229657	229657	Terrabacteria group	Actinobacteria	4.38969	65.5	-	JLJI01	8	4281	4101	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419617	GCA_000655135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/135/GCA_000655135.1_Myco_tube_XTB13-183_V1	-	XTB13-183
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.95699	37.8	-	LNNU01	24	3004	2915	12/23/15	3/1/17	Contig	FDA	SAMN02769778	GCA_001482035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/035/GCA_001482035.1_ASM148203v1	26950338	MOD1_LS651
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.6643	30.5	-	CUPX01	18	1754	1653	3/31/15	3/18/17	Contig	SC	SAMEA1010381	GCA_001238165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/165/GCA_001238165.1_7092_1_32	-	OXC6479
Salmonella enterica subsp. enterica serovar Enteritidis str. 2010K-0286	1192593	PRJNA168729	168729	Proteobacteria	Gammaproteobacteria	4.72985	52.1	-	ATGA01	159	4844	4601	6/25/13	3/1/17	Scaffold	The Genome Institute	SAMN02415302	GCA_000414925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/925/GCA_000414925.2_ASM41492v2	-	2010K-0286
Staphylococcus aureus M0724	1388487	PRJNA216660	216660	Terrabacteria group	Firmicutes	2.88213	32.8	-	JBBQ01	58	3075	2896	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325611	GCA_000528915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/915/GCA_000528915.1_Stap_aure_M0724_V1	-	M0724
Staphylococcus aureus M0727	1388489	PRJNA216662	216662	Terrabacteria group	Firmicutes	2.89091	32.8	-	JBBO01	50	3052	2867	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325613	GCA_000528935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/935/GCA_000528935.1_Stap_aure_M0727_V1	-	M0727
Salmonella enterica subsp. enterica serovar Cubana str. 76814	1192560	PRJNA168677	168677	Proteobacteria	Gammaproteobacteria	4.91897	52.2	-	AZGR01	144	4973	4735	12/9/13	3/1/17	Scaffold	The Genome Institute	SAMN02472116	GCA_000504705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/705/GCA_000504705.2_ASM50470v2	24459266	76814
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69529	30.4	-	CUVE01	18	1784	1683	3/31/15	3/18/17	Contig	SC	SAMEA1401316	GCA_001238185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/185/GCA_001238185.1_7213_3_74	-	OXC6619
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.90976	37.9	-	LNNW01	21	2950	2849	12/23/15	3/1/17	Contig	FDA	SAMN02991379	GCA_001482055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/055/GCA_001482055.1_ASM148205v1	26950338	MOD1_LS990
Mycobacterium tuberculosis XTB13-184	1427262	PRJNA229658	229658	Terrabacteria group	Actinobacteria	4.39068	65.6	-	JLJH01	3	4272	4113	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419618	GCA_000655155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/155/GCA_000655155.1_Myco_tube_XTB13-184_V1	-	XTB13-184
Escherichia coli EC4013	1005529	PRJNA65927	65927	Proteobacteria	Gammaproteobacteria	5.34992	50.3	-	AKMH01	399	5800	5328	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435923	GCA_000267345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/345/GCA_000267345.2_ASM26734v2	23516226	EC4013
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.15416	39.5	-	CKUX01	66	2372	2166	3/21/15	3/4/17	Contig	SC	SAMEA1026091	GCA_001097465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/465/GCA_001097465.1_6823_3_15	-	SMRU1911
Helicobacter pylori	210	PRJNA298419	298419	Proteobacteria	delta/epsilon subdivisions	1.63312	38.6	-	LQND02	37	1636	1460	1/28/16	3/28/17	Contig	University of Malaya-University of Western Australia	SAMN04159052	GCA_001542505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/505/GCA_001542505.2_ASM154250v2	-	UM443S
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.21382	51.6	-	FERR01	109	2578	2224	2/9/16	3/21/17	Scaffold	SC	SAMEA2673990	GCA_900024335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/335/GCA_900024335.1_14355_4_69	-	2842STDY5881026
Pseudomonas aeruginosa	287	PRJNA297686	297686	Proteobacteria	Gammaproteobacteria	6.66291	66.2	-	LKPU01	22	6355	6112	10/26/15	4/10/17	Scaffold	Oklahoma State Universtiy	SAMN04129507	GCA_001414155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/155/GCA_001414155.1_ASM141415v1	26823574	14651
Acinetobacter baumannii 1593273	1310698	PRJNA194774	194774	Proteobacteria	Gammaproteobacteria	4.12845	38.9	-	JEYL01	272	4164	3803	2/25/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02385045	GCA_000582335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/335/GCA_000582335.1_ASM58233v1	-	1593273
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.12296	35.4	-	CDCM01	73	2190	2089	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780165	GCA_001398915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/915/GCA_001398915.1_Mother11	-	Mother11
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05865	41.1	-	FIRW01	20	2072	1967	2/10/16	3/19/17	Contig	SC	SAMEA1566168	GCA_900055535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/535/GCA_900055535.1_8525_5_87	-	VS3878
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.35321	38.3	-	LOLW01	123	3063	2926	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329979	GCA_001601085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/085/GCA_001601085.1_ASM160108v1	-	NY20
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.38987	50.8	-	CXBD01	358	4643	4175	7/16/15	2/24/17	Scaffold	SC	SAMEA954643	GCA_001255615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/615/GCA_001255615.1_5008_8_4	-	ShIB10_401080
Burkholderia pseudomallei	28450	PRJNA383254	383254	Proteobacteria	Betaproteobacteria	6.56321	67.8	-	NEGN01	914	7227	5953	8/9/17	8/12/17	Contig	"Korea National Institute of Health, Korea Centers for Disease Control and Prevention"	SAMN06760910	GCA_002245325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/325/GCA_002245325.1_ASM224532v1	-	H0901
Vibrio cholerae	666	PRJNA376799	376799	Proteobacteria	Gammaproteobacteria	4.0176	47.5	-	MWRE01	181	3830	3558	6/21/17	6/24/17	Contig	RARI	SAMN06447200	GCA_002204095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/095/GCA_002204095.1_ASM220409v1	-	153
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.27371	29	-	FAJQ01	1569	3846	3635	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664328	GCA_900010375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/375/GCA_900010375.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	4.95364	45.3	-	MIRI01	128	4689	4514	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN03358820	GCA_001726685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/685/GCA_001726685.1_ASM172668v1	-	GCSL_R59
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.2745	57.4	-	LFAN01	2	5215	4997	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280401	GCA_001033765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/765/GCA_001033765.1_Kleb_pneu_MGH112_V1	-	MGH112
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.05917	37.1	-	JUXZ01	106	3160	2982	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197867	GCA_001057835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/835/GCA_001057835.1_ASM105783v1	26230489	664.rep1_EFLS
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.66901	38	-	JWEB01	166	2634	2478	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197033	GCA_001053835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/835/GCA_001053835.1_ASM105383v1	26230489	1070_EFCM
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.76622	67.7	-	CIGR01	776	3793	3125	4/21/15	3/26/17	Scaffold	SC	SAMEA751149	GCA_001331595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/595/GCA_001331595.1_5601_2_5	-	B086
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.6965	31.3	-	FBFP01	29	1744	1655	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683208	GCA_001494435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/435/GCA_001494435.1_SS_2322	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.06996	55.1	-	FKGJ01	61	4989	4785	4/6/16	3/28/17	Scaffold	SC	SAMEA2273481	GCA_900077745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/745/GCA_900077745.1_12045_5_60	-	e786
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96042	64.3	-	FVVP01	29	4938	4807	3/10/17	3/18/17	Contig	SC	SAMEA2152504	GCA_900140115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/115/GCA_900140115.1_10665_2_65	-	518
Pseudomonas sp. ABAC61	1230461	PRJNA295870	295870	Proteobacteria	Gammaproteobacteria	7.0883	63.3	-	LKBM01	3128	6625	5307	12/15/15	12/15/15	Contig	New Zealand Institute for Plant & Food research	SAMN04092563	GCA_001467175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/175/GCA_001467175.1_ASM146717v1	-	ABAC61
Pseudomonas sp. 63_8	1641374	PRJNA278302	278302	Proteobacteria	Gammaproteobacteria	0.477531	62.5	-	LGEP01	179	606	606	1/8/16	1/8/16	Contig	Lawrence Berkeley National Lab	SAMN03445113	GCA_001507875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/507/875/GCA_001507875.1_ASM150787v1	26787827	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98072	64.3	-	FVVR01	40	4966	4826	3/10/17	3/18/17	Contig	SC	SAMEA2159986	GCA_900140125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/125/GCA_900140125.1_10665_2_64	-	517
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.87216	55.2	-	FKGL01	31	4720	4513	4/6/16	3/28/17	Scaffold	SC	SAMEA2273238	GCA_900077755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/755/GCA_900077755.1_11983_7_13	-	e798
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66152	31.4	-	FAYW01	21	1720	1625	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683032	GCA_001494475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/475/GCA_001494475.1_H040680225	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.6986	67.5	-	CFZF01	1146	3764	2963	3/15/15	3/26/17	Scaffold	SC	SAMEA751150	GCA_001331615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/615/GCA_001331615.1_5601_2_4	-	B085
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.00026	37.7	-	JVZE01	368	3067	2912	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197160	GCA_001054055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/055/GCA_001054055.1_ASM105405v1	26230489	1199_EFCM
Enterococcus faecalis	1351	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.07883	37.2	-	JUWE01	137	3181	3030	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197914	GCA_001058065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/065/GCA_001058065.1_ASM105806v1	26230489	71_EFLS
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.78648	57.1	-	LFAO01	23	5752	5298	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280402	GCA_001033805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/805/GCA_001033805.1_Kleb_pneu_MGH113_V1	-	MGH113
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.26484	45.1	-	MIRJ01	126	4954	4772	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368245	GCA_001726695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/695/GCA_001726695.1_ASM172669v1	-	GCSL_R60
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.09765	28.6	-	FAMF01	408	3730	3613	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664402	GCA_900010385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/385/GCA_900010385.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA376796	376796	Proteobacteria	Gammaproteobacteria	3.95086	47.6	-	MWRD01	516	3811	3563	6/21/17	6/24/17	Contig	RARI	SAMN06446881	GCA_002204105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/105/GCA_002204105.1_ASM220410v1	-	56
Burkholderia pseudomallei	28450	PRJNA272882	272882	Proteobacteria	Betaproteobacteria	7.39189	68	-	JYBI01	83	7577	6924	2/24/15	4/10/17	Scaffold	Menzies School of Health Research	SAMN03287949	GCA_000932105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/932/105/GCA_000932105.1_ASM93210v1	25883282	QCMRI_BP18
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.7912	50.7	-	CXKI01	658	5490	4655	7/16/15	2/24/17	Scaffold	SC	SAMEA2004864	GCA_001255635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/635/GCA_001255635.1_8290_4_29	-	98274
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.35405	38.2	-	LOLX01	136	3077	2925	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329980	GCA_001601115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/115/GCA_001601115.1_ASM160111v1	-	NY21
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.28541	40.9	-	FIHT01	37	2311	2140	2/10/16	3/19/17	Contig	SC	SAMEA1316591	GCA_900055855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/855/GCA_900055855.1_7114_5_70	-	LSS70
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.08673	35.3	-	CDCN01	117	2112	1998	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780166	GCA_001398935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/935/GCA_001398935.1_Child11-1	-	Child11-1
Acinetobacter baumannii 1417041	1310703	PRJNA194779	194779	Proteobacteria	Gammaproteobacteria	3.70069	39	-	JEYP01	55	3523	3353	2/25/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02385049	GCA_000582355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/355/GCA_000582355.1_ASM58235v1	-	1417041
Pseudomonas aeruginosa	287	PRJNA297686	297686	Proteobacteria	Gammaproteobacteria	6.34919	66.5	-	LKPV01	12	6008	5823	10/26/15	3/18/17	Scaffold	Oklahoma State Universtiy	SAMN04129521	GCA_001414165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/165/GCA_001414165.1_ASM141416v1	26823574	14672
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.20165	51.5	-	FETC01	94	2580	2209	2/9/16	3/21/17	Scaffold	SC	SAMEA2673921	GCA_900024345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/345/GCA_900024345.1_14355_5_48	-	2842STDY5881101
Helicobacter pylori	210	PRJNA342930	342930	Proteobacteria	delta/epsilon subdivisions	1.54493	38.9	-	MJIS01	26	1534	1411	12/12/16	3/28/17	Contig	National University of Singapore	SAMN05771045	GCA_001901635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/635/GCA_001901635.1_ASM190163v1	-	241
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.04741	39.5	-	CRVK01	69	2246	2036	3/22/15	3/4/17	Contig	SC	SAMEA1025735	GCA_001097485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/485/GCA_001097485.1_6805_7_13	-	SMRU1742
Escherichia coli EC4422	1005528	PRJNA65925	65925	Proteobacteria	Gammaproteobacteria	5.3128	50.3	-	AKMG01	352	5712	5287	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435955	GCA_000267365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/365/GCA_000267365.2_ASM26736v2	23516226	EC4422
Mycobacterium tuberculosis XTB13-186	1427264	PRJNA229660	229660	Terrabacteria group	Actinobacteria	4.43118	65.5	-	JLJG01	7	4306	4106	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419620	GCA_000655175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/175/GCA_000655175.1_Myco_tube_XTB13-186_V1	-	XTB13-186
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.91073	37.9	-	LNNV01	17	2949	2849	12/23/15	3/1/17	Contig	FDA	SAMN02990450	GCA_001482075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/075/GCA_001482075.1_ASM148207v1	26950338	MOD1_LS988
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.65816	30.4	-	CUJT01	15	1732	1641	3/31/15	3/18/17	Contig	SC	SAMEA1010253	GCA_001238245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/245/GCA_001238245.1_7038_3_60	-	OXC6310
Salmonella enterica subsp. enterica serovar Virchow str. SVQ1	1249525	PRJNA178788	178788	Proteobacteria	Gammaproteobacteria	4.73566	52.0699	plasmid pSVQ1_2:NZ_CM002365.1/CM002365.1; plasmid pSVQ1_3:NZ_CM002366.1/CM002366.1; plasmid pSVQ1_4:NZ_CM002367.1/CM002367.1	AZMP01	20	4734	4513	12/31/13	2/26/17	Scaffold	The University of Queensland	SAMN02597465	GCA_000516855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/855/GCA_000516855.1_SvirSVQ1_v1.0	24885207	SVQ1
Staphylococcus aureus M0729	1388491	PRJNA216664	216664	Terrabacteria group	Firmicutes	2.90988	32.7	-	JBBM01	70	3089	2953	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325615	GCA_000528955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/955/GCA_000528955.1_Stap_aure_M0729_V1	-	M0729
Staphylococcus aureus M0730	1388492	PRJNA216665	216665	Terrabacteria group	Firmicutes	2.88449	32.8	-	JBBL01	73	3071	2924	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325616	GCA_000528975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/975/GCA_000528975.1_Stap_aure_M0730_V1	-	M0730
Salmonella enterica subsp. enterica serovar Namur str. 05-2929	1348563	PRJNA208660	208660	Proteobacteria	Gammaproteobacteria	4.84224	51.9	-	AWGG01	21	4863	4616	3/19/14	2/27/17	Scaffold	Scientific Institut of Public Health	SAMN02206457	GCA_000599425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/425/GCA_000599425.1_Salmonella_enterica_enterica_Namur	24723724	May-29
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.73402	30.2	-	CUNG01	15	1830	1707	3/31/15	3/18/17	Contig	SC	SAMEA1010275	GCA_001238565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/565/GCA_001238565.1_7065_7_56	-	OXC6404
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.90963	37.9	-	LNNX01	28	2951	2847	12/23/15	3/1/17	Contig	FDA	SAMN02991380	GCA_001482095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/095/GCA_001482095.1_ASM148209v1	26950338	MOD1_LS993
Mycobacterium tuberculosis XTB13-187	1427265	PRJNA229661	229661	Terrabacteria group	Actinobacteria	4.44186	65.5	-	JLJF01	7	4307	4101	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419621	GCA_000655195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/195/GCA_000655195.1_Myco_tube_XTB13-187_V1	-	XTB13-187
Escherichia coli EC4421	1005527	PRJNA65923	65923	Proteobacteria	Gammaproteobacteria	5.31394	50.3	-	AKMF01	393	5719	5278	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435984	GCA_000267385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/385/GCA_000267385.2_ASM26738v2	23516226	EC4421
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.17323	39.6	-	CMKQ01	61	2368	2119	3/23/15	3/4/17	Contig	SC	SAMEA1029408	GCA_001097545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/545/GCA_001097545.1_7054_4_9	-	SMRU3033
Helicobacter pylori	210	PRJNA342930	342930	Proteobacteria	delta/epsilon subdivisions	1.56087	38.8	-	MKLV01	29	1562	1406	1/9/17	3/28/17	Contig	National University of Singapore	SAMN05827485	GCA_001939315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/315/GCA_001939315.1_ASM193931v1	-	428
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.1587	51.5	-	FEUP01	82	2528	2165	2/9/16	3/21/17	Scaffold	SC	SAMEA2673924	GCA_900024355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/355/GCA_900024355.1_14355_6_60	-	2842STDY5881209
Pseudomonas aeruginosa	287	PRJNA297686	297686	Proteobacteria	Gammaproteobacteria	6.35285	66.5	-	LKPW01	11	6004	5834	10/26/15	3/18/17	Scaffold	Oklahoma State Universtiy	SAMN04129522	GCA_001414175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/175/GCA_001414175.1_ASM141417v1	26823574	14673
Acinetobacter baumannii 1552818	1310666	PRJNA194742	194742	Proteobacteria	Gammaproteobacteria	4.02609	39.2	-	JFCD01	196	4027	3667	2/27/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02384929	GCA_000582945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/945/GCA_000582945.1_ASM58294v1	-	1552818
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.08587	35.3	-	CDCP01	95	2106	1995	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780167	GCA_001398955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/955/GCA_001398955.1_Child11-2	-	Child11-2
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04759	41.2	-	FINZ01	22	2060	1958	2/10/16	3/19/17	Contig	SC	SAMEA1566157	GCA_900055875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/875/GCA_900055875.1_8337_6_47	-	BM478
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.35923	38.2	-	LOLY01	171	3098	2921	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329981	GCA_001601135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/135/GCA_001601135.1_ASM160113v1	-	NY22
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.605	50.4	-	CXCA01	399	4930	4415	7/16/15	2/24/17	Scaffold	SC	SAMEA954547	GCA_001255655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/655/GCA_001255655.1_5236_3_3	-	ShIB2024_440827
Burkholderia pseudomallei	28450	PRJNA272882	272882	Proteobacteria	Betaproteobacteria	7.10844	68.2	-	JYBK01	39	7407	6879	2/24/15	3/25/17	Scaffold	Menzies School of Health Research	SAMN03287951	GCA_000932145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/932/145/GCA_000932145.1_ASM93214v1	25883282	QCMRI_BP32
Vibrio cholerae	666	PRJNA396740	396740	Proteobacteria	Gammaproteobacteria	3.75461	47.5	-	NPOK01	125	3677	3452	8/14/17	8/16/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07451865	GCA_002251495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/495/GCA_002251495.1_ASM225149v1	-	NMH2016
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.16993	29.1	-	FAOG01	924	3889	3671	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664454	GCA_900010415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/415/GCA_900010415.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.17625	45.2	-	MIRK01	126	4959	4739	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368247	GCA_001726725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/725/GCA_001726725.1_ASM172672v1	-	GCSL_R62
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	6.02335	57	-	LFAP01	23	6041	5691	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280403	GCA_001033825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/825/GCA_001033825.1_Kleb_pneu_MGH114_V1	-	MGH114
Enterococcus faecalis	1351	PRJNA310065	310065	Terrabacteria group	Firmicutes	2.83672	37.6	-	LSFS01	31	2787	2675	2/17/16	3/27/17	Scaffold	Universidad Complutense de Madrid	SAMN04445878	GCA_001563075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/075/GCA_001563075.1_ASM156307v1	-	DBH18
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.96036	37.7	-	JVYK01	696	3118	2830	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197180	GCA_001054105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/105/GCA_001054105.1_ASM105410v1	26230489	1216.rep2_EFCM
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.82446	67.9	-	CGFN01	434	3736	3263	3/15/15	3/26/17	Scaffold	SC	SAMEA751155	GCA_001331635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/635/GCA_001331635.1_5476_7_8	-	B038
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.63779	31.4	-	FBLB01	17	1683	1596	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683353	GCA_001494535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/535/GCA_001494535.1_H133020651b	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.00365	55.1	-	FKGN01	29	4900	4683	4/6/16	3/28/17	Scaffold	SC	SAMEA2273240	GCA_900077765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/765/GCA_900077765.1_11983_7_15	-	e804
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.95772	64.2	-	FSOF01	20	4901	4774	12/14/16	3/21/17	Contig	SC	SAMEA2161322	GCA_900140145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/145/GCA_900140145.1_10665_2_61	-	513
Pseudomonas sp. CO183	1883453	PRJNA183510	183510	Proteobacteria	Gammaproteobacteria	4.52247	63	-	MCNJ01	117	4249	4066	8/17/16	8/17/16	Contig	University of Calgary	SAMN05430256	GCA_001705955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/955/GCA_001705955.1_ASM170595v1	-	-
Pseudomonas sp. K35	1882381	PRJNA330673	330673	Proteobacteria	Gammaproteobacteria	4.79969	62.9	-	MCAL01	194	4554	4304	8/17/16	8/17/16	Contig	NETL	SAMN05420579	GCA_001706005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/706/005/GCA_001706005.1_ASM170600v1	-	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.91271	64.1	-	FVVU01	5	4920	4805	3/10/17	3/18/17	Contig	SC	SAMEA2163411	GCA_900140155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/155/GCA_900140155.1_10665_2_70	-	524
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.02271	55.5	-	FKGO01	133	5057	4725	4/6/16	3/28/17	Scaffold	SC	SAMEA2273239	GCA_900077775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/775/GCA_900077775.1_11983_7_14	-	e800
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.71967	31.2	-	FBLW01	52	1770	1646	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683375	GCA_001494555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/555/GCA_001494555.1_SWAN342	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.81426	67.9	-	CFYU01	398	3718	3265	3/15/15	3/26/17	Scaffold	SC	SAMEA751157	GCA_001331655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/655/GCA_001331655.1_5515_8_9	-	B073
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.01411	37.7	-	JVXN01	319	3094	2939	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197203	GCA_001054215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/215/GCA_001054215.1_ASM105421v1	26230489	1238_EFCM
Enterococcus faecalis	1351	PRJNA307050	307050	Terrabacteria group	Firmicutes	2.92998	37.6	-	LQAM01	14	3006	2860	3/21/16	7/17/17	Scaffold	Argonne national Lab	SAMN04370969	GCA_001594365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/365/GCA_001594365.1_ASM159436v1	-	ICU1-2c
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.88398	56.8	-	LFAQ01	7	5932	5583	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280404	GCA_001033835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/835/GCA_001033835.1_Kleb_pneu_MGH115_V1	-	MGH115
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.12515	45.2	-	MIRL01	102	4825	4664	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368248	GCA_001726735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/735/GCA_001726735.1_ASM172673v1	-	GCSL_R63
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.12063	28.6	-	FAOJ01	431	3749	3631	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664458	GCA_900010425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/425/GCA_900010425.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.8694	47.6	-	NMSX01	75	3625	3496	8/31/17	9/2/17	Contig	University of Alberta	SAMN07350485	GCA_002284075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/075/GCA_002284075.1_ASM228407v1	-	OYP7C09
Burkholderia pseudomallei	28450	PRJNA278093	278093	Proteobacteria	Betaproteobacteria	6.99685	68.2	-	JZXP01	45	7267	6614	3/24/15	4/10/17	Scaffold	Menzies School of Health Research	SAMN03402959	GCA_000961535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/535/GCA_000961535.1_ASM96153v1	24145517	MSHR5107
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.98827	50.5	-	CWXZ01	484	5862	4814	7/16/15	2/24/17	Scaffold	SC	SAMEA2434377	GCA_001255675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/675/GCA_001255675.1_12850_1_50	-	20352044
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.42461	38.2	-	LOMF01	610	3191	2873	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329988	GCA_001601155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/155/GCA_001601155.1_ASM160115v1	-	NY29
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.08337	41.2	-	FIRO01	25	2114	1999	2/10/16	3/19/17	Contig	SC	SAMEA1566067	GCA_900055885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/885/GCA_900055885.1_8525_5_79	-	VS3587
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.24366	35.4	-	CDCQ01	200	2311	2166	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780168	GCA_001398975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/975/GCA_001398975.1_Mother12	-	Mother12
Acinetobacter baumannii 655378	1310693	PRJNA194769	194769	Proteobacteria	Gammaproteobacteria	3.97336	39	-	JFCE02	31	3791	3589	2/27/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02385042	GCA_000582965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/965/GCA_000582965.2_ASM58296v2	-	655378
Pseudomonas aeruginosa	287	PRJNA294638	294638	Proteobacteria	Gammaproteobacteria	6.74952	65.9	-	LJNV01	267	6681	6370	10/29/15	3/18/17	Scaffold	Technical University of Denmark	SAMN04028038	GCA_001420185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/185/GCA_001420185.1_ASM142018v1	-	ATCC 33349
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16973	51.6	-	FEVD01	77	2514	2178	2/9/16	3/19/17	Scaffold	SC	SAMEA2674012	GCA_900024365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/365/GCA_900024365.1_14355_6_95	-	2842STDY5881244
Helicobacter pylori	210	PRJNA342930	342930	Proteobacteria	delta/epsilon subdivisions	1.59367	38.7	-	MJGH01	26	1576	1419	1/9/17	3/28/17	Contig	National University of Singapore	SAMN05771044	GCA_001939585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/585/GCA_001939585.1_ASM193958v1	-	178
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	1.9992	39.7	-	CPOJ01	219	2197	1991	3/23/15	3/4/17	Contig	SC	SAMEA1020169	GCA_001097645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/645/GCA_001097645.1_6237_8_20	-	S-177
Escherichia coli TW14301	1005526	PRJNA65921	65921	Proteobacteria	Gammaproteobacteria	5.29567	50.3	-	AKME01	437	5673	5219	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435983	GCA_000267405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/405/GCA_000267405.2_ASM26740v2	23516226	TW14301
Mycobacterium tuberculosis XTB13-188	1427266	PRJNA229662	229662	Terrabacteria group	Actinobacteria	4.39051	65.6	-	JLJE01	1	4271	4110	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419622	GCA_000655215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/215/GCA_000655215.1_Myco_tube_XTB13-188_V1	-	XTB13-188
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.90978	37.9	-	LNNZ01	17	2943	2850	12/23/15	3/1/17	Contig	FDA	SAMN02991383	GCA_001482115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/115/GCA_001482115.1_ASM148211v1	26950338	MOD1_LS996
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.65222	30.4	-	CURJ01	20	1750	1661	3/31/15	3/18/17	Contig	SC	SAMEA1010512	GCA_001238765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/765/GCA_001238765.1_7092_1_67	-	OXC6514
Salmonella enterica subsp. enterica serovar Typhimurium str. 95799	1387331	PRJNA215426	215426	Proteobacteria	Gammaproteobacteria	4.93542	52.1	-	JHAE01	107	5070	4847	4/25/14	3/1/17	Scaffold	University of California Irvine	SAMN02692152	GCA_000648415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/415/GCA_000648415.2_95799_Ver_1	24719441	95799
Staphylococcus aureus M0731	1388493	PRJNA216666	216666	Terrabacteria group	Firmicutes	2.8903	32.9	-	JBBK01	56	3039	2883	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325617	GCA_000528995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/528/995/GCA_000528995.1_Stap_aure_M0731_V1	-	M0731
Staphylococcus aureus M0733	1388495	PRJNA216668	216668	Terrabacteria group	Firmicutes	2.89326	32.9	-	JBBI01	67	3085	2902	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325619	GCA_000529015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/015/GCA_000529015.1_Stap_aure_M0733_V1	-	M0733
Salmonella enterica subsp. enterica serovar Typhimurium str. 98346	1387333	PRJNA215428	215428	Proteobacteria	Gammaproteobacteria	4.90784	52.1	-	JHAF01	104	5041	4807	4/25/14	3/1/17	Scaffold	University of California Irvine	SAMN02692250	GCA_000648435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/435/GCA_000648435.2_98346_ver1	24719441	98346
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.62795	30.5	-	CUMR01	17	1690	1595	3/31/15	3/18/17	Contig	SC	SAMEA1010499	GCA_001238805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/805/GCA_001238805.1_7065_7_42	-	OXC6388
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.91907	37.9	-	LNOA01	18	2958	2857	12/23/15	3/1/17	Contig	FDA	SAMN02991384	GCA_001482135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/135/GCA_001482135.1_ASM148213v1	26950338	MOD1_LS997
Mycobacterium tuberculosis XTB13-190	1427268	PRJNA229664	229664	Terrabacteria group	Actinobacteria	4.39766	65.6	-	JLJD01	3	4281	4102	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419624	GCA_000655235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/235/GCA_000655235.1_Myco_tube_XTB13-190_V1	-	XTB13-190
Escherichia coli O157:H7 str. TW14313	1286877	PRJNA65919	65919	Proteobacteria	Gammaproteobacteria	5.33028	50.5	-	AKMD01	664	5773	5282	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435982	GCA_000267425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/425/GCA_000267425.2_ASM26742v2	-	TW14313
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.05426	39.8	-	CLEW01	58	2249	2004	3/21/15	3/4/17	Contig	SC	SAMEA1025785	GCA_001097845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/845/GCA_001097845.1_6899_6_9	-	SMRU2073
Helicobacter pylori	210	PRJNA342928	342928	Proteobacteria	delta/epsilon subdivisions	1.63168	39	-	MJGG01	29	1609	1445	1/9/17	3/28/17	Contig	National University of Singapore	SAMN05771043	GCA_001939635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/635/GCA_001939635.1_ASM193963v1	-	132
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.19459	51.3	-	FEWF01	112	2542	2166	2/9/16	3/21/17	Scaffold	SC	SAMEA2674164	GCA_900024375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/375/GCA_900024375.1_14324_4_76	-	2842STDY5881321
Pseudomonas aeruginosa	287	PRJNA294638	294638	Proteobacteria	Gammaproteobacteria	6.35487	66.5	-	LJNW01	169	6095	5850	10/29/15	3/18/17	Scaffold	Technical University of Denmark	SAMN04028039	GCA_001420205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/205/GCA_001420205.1_ASM142020v1	-	ATCC 33350
Acinetobacter baumannii 323408	1310820	PRJNA194896	194896	Proteobacteria	Gammaproteobacteria	4.14137	38.9	-	JFCZ01	97	4154	3885	2/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02567753	GCA_000583235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/235/GCA_000583235.1_ASM58323v1	-	323408
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.23765	35.4	-	CDCO01	174	2302	2169	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780169	GCA_001398995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/995/GCA_001398995.1_Child12-1	-	Child12-1
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05752	41.1	-	FIRS01	23	2075	1965	2/10/16	3/19/17	Contig	SC	SAMEA1566034	GCA_900055895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/895/GCA_900055895.1_8525_5_82	-	VS3709
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.49405	38.3	-	LOLB01	162	3202	3019	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329960	GCA_001601165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/165/GCA_001601165.1_ASM160116v1	-	NY1
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.67286	50.8	-	CWWS01	411	5425	4435	7/16/15	2/24/17	Scaffold	SC	SAMEA2434360	GCA_001255695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/695/GCA_001255695.1_12830_1_33	-	KY 2529
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.1455	68.2	-	CWJD01	72	7431	6921	7/6/15	3/26/17	Scaffold	SC	SAMEA949330	GCA_001182265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/265/GCA_001182265.1_6998_1_21	-	EY6
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	4.03303	47.4	-	NMSV01	72	3895	3722	8/31/17	9/2/17	Contig	University of Alberta	SAMN07350487	GCA_002284095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/095/GCA_002284095.1_ASM228409v1	-	OYP8C06
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.36514	29.4	-	CZZU01	1821	3988	3685	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664077	GCA_900010475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/475/GCA_900010475.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.06596	45.4	-	MIRM01	111	4797	4607	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368250	GCA_001726755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/755/GCA_001726755.1_ASM172675v1	-	GCSL_R65
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.65974	57	-	LFAR01	3	5665	5400	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280405	GCA_001033845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/845/GCA_001033845.1_Kleb_pneu_MGH116_V1	-	MGH116
Enterococcus faecalis	1351	PRJNA328825	328825	Terrabacteria group	Firmicutes	3.04973	37.4	-	MBRC01	194	3136	2943	7/22/16	3/28/17	Scaffold	UNIVERSIDADE FEDERAL DE CIENCIAS DA SAUDE DE PORTO ALEGRE	SAMN05427524	GCA_001692705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/705/GCA_001692705.1_ASM169270v1	-	F165
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.03918	37.8	-	JVEC01	230	3110	2931	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197708	GCA_001055235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/235/GCA_001055235.1_ASM105523v1	26230489	514_EFCM
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.61894	67.2	-	CFWN01	1042	3694	2802	3/15/15	3/26/17	Scaffold	SC	SAMEA751159	GCA_001331675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/675/GCA_001331675.1_5515_8_11	-	B075
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65806	31.4	-	FBMN01	25	1711	1626	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683389	GCA_001494615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/615/GCA_001494615.1_NCTC11438	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.75279	55.5	-	FKGP01	23	4584	4390	4/6/16	3/28/17	Scaffold	SC	SAMEA2273241	GCA_900077785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/785/GCA_900077785.1_11983_7_16	-	e806
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.95928	64.2	-	FVVS01	18	4898	4774	3/10/17	3/18/17	Contig	SC	SAMEA2163337	GCA_900140165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/165/GCA_900140165.1_10665_2_68	-	522
Pseudomonas sp. BDAL1	1884210	PRJNA335569	335569	Proteobacteria	Gammaproteobacteria	5.4055	58.4	-	MCRW01	126	4848	4556	9/13/16	9/13/16	Contig	University of Pittsburgh	SAMN05449058	GCA_001723935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/935/GCA_001723935.1_ASM172393v1	-	-
Pseudomonas sp. BIN4	1927148	PRJNA356961	356961	Proteobacteria	Gammaproteobacteria	4.04049	64.6	-	MRWM01	1823	-	-	12/23/16	12/23/16	Contig	University of KwaZulu-Natal	SAMN06130432	GCA_001914345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/345/GCA_001914345.1_ASM191434v1	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.28459	64.2	-	FSOI01	31	5339	5191	12/14/16	3/21/17	Contig	SC	SAMEA2146173	GCA_900140185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/185/GCA_900140185.1_10665_2_71	-	527
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.74578	55.5	-	FKGR01	21	4587	4411	4/6/16	3/28/17	Scaffold	SC	SAMEA2273242	GCA_900077795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/795/GCA_900077795.1_11983_7_17	-	e811
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.60909	31.6	-	FAZO01	30	1617	1551	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683063	GCA_001494695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/695/GCA_001494695.1_H082280513	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.67614	67.5	-	CGFM01	1091	3746	2949	3/15/15	3/26/17	Scaffold	SC	SAMEA751160	GCA_001331695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/695/GCA_001331695.1_5515_8_4	-	B090
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.79099	37.8	-	JVAH01	276	2812	2679	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197807	GCA_001055445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/445/GCA_001055445.1_ASM105544v1	26230489	607_EFCM
Enterococcus faecalis	1351	PRJNA319060	319060	Terrabacteria group	Firmicutes	3.4418	37.6	-	MEGW01	70	3527	3302	2/24/17	2/27/17	Scaffold	IBT-UNAM	SAMN04902337	GCA_002006705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/705/GCA_002006705.1_ASM200670v1	-	F
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.89411	56.8	-	LFAS01	7	5925	5586	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280406	GCA_001033885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/885/GCA_001033885.1_Kleb_pneu_MGH117_V1	-	MGH117
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.04137	45.3	-	MIRN01	100	4779	4631	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368251	GCA_001726775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/775/GCA_001726775.1_ASM172677v1	-	GCSL_R74
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.45671	28.8	-	CZZS01	317	4148	4023	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664078	GCA_900010485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/485/GCA_900010485.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.95095	47.5	-	NMSY01	75	3682	3541	8/31/17	9/2/17	Contig	University of Alberta	SAMN07350484	GCA_002284155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/155/GCA_002284155.1_ASM228415v1	-	OYP6G08
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.03742	68.3	-	CWJA01	53	7240	6742	7/6/15	3/26/17	Scaffold	SC	SAMEA949364	GCA_001182285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/285/GCA_001182285.1_6998_1_15	-	ATCC 23343
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.40743	50.8	-	CXCH01	368	4687	4204	7/16/15	2/24/17	Scaffold	SC	SAMEA954769	GCA_001255715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/715/GCA_001255715.1_5236_3_9	-	ShIB3374_440833
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.43718	38.3	-	LOME01	532	3202	2901	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329987	GCA_001601175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/175/GCA_001601175.1_ASM160117v1	-	NY28
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04083	41.1	-	FITB01	23	2054	1926	2/10/16	3/19/17	Contig	SC	SAMEA1566190	GCA_900055905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/905/GCA_900055905.1_8525_5_7	-	FX415_6
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.23772	35.4	-	CDCR01	173	2310	2173	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780170	GCA_001399015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/015/GCA_001399015.1_Child12-2	-	Child12-2
Acinetobacter baumannii 458282	1310811	PRJNA194887	194887	Proteobacteria	Gammaproteobacteria	4.03848	39.3	-	JFCY01	123	3996	3694	2/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02567754	GCA_000583255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/255/GCA_000583255.1_ASM58325v1	-	458282
Pseudomonas aeruginosa	287	PRJNA294638	294638	Proteobacteria	Gammaproteobacteria	6.70097	66.2	-	LJNU01	181	6531	6248	10/29/15	3/18/17	Scaffold	Technical University of Denmark	SAMN04027999	GCA_001420225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/225/GCA_001420225.1_ASM142022v1	-	ATCC 33348
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16218	51.5	-	FEWV01	94	2525	2140	2/9/16	3/21/17	Scaffold	SC	SAMEA2674198	GCA_900024385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/385/GCA_900024385.1_14324_4_90	-	2842STDY5881335
Helicobacter pylori	210	PRJNA342930	342930	Proteobacteria	delta/epsilon subdivisions	1.57391	38.8	-	MJMV01	29	1566	1407	1/9/17	3/28/17	Contig	National University of Singapore	SAMN05804593	GCA_001940015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/015/GCA_001940015.1_ASM194001v1	-	H9
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.02671	39.6	-	CLKN01	76	2192	1975	3/21/15	3/11/17	Contig	SC	SAMEA1029231	GCA_001097885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/885/GCA_001097885.1_6938_3_28	-	SMRU3153
Escherichia coli EC4196	1005524	PRJNA65917	65917	Proteobacteria	Gammaproteobacteria	5.35958	50.3	-	AKMC01	515	5849	5372	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435954	GCA_000267445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/445/GCA_000267445.2_ASM26744v2	-	EC4196
Mycobacterium tuberculosis XTB13-191	1427269	PRJNA229665	229665	Terrabacteria group	Actinobacteria	4.41886	65.5	-	JLJC01	5	4294	4117	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419625	GCA_000655255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/255/GCA_000655255.1_Myco_tube_XTB13-191_V1	-	XTB13-191
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.91038	37.9	-	LNOB01	21	2948	2850	12/23/15	3/1/17	Contig	FDA	SAMN02991386	GCA_001482155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/155/GCA_001482155.1_ASM148215v1	26950338	MOD1_LS1000
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.59429	30.4	-	CULV01	12	1658	1565	3/31/15	3/18/17	Contig	SC	SAMEA1010396	GCA_001238825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/825/GCA_001238825.1_7065_7_23	-	OXC6369
Salmonella enterica subsp. enterica serovar Typhimurium str. 116045	1387345	PRJNA215440	215440	Proteobacteria	Gammaproteobacteria	4.9388	52.1	-	JHAI01	137	5100	4846	4/25/14	3/1/17	Scaffold	University of California Irvine	SAMN02692255	GCA_000648455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/455/GCA_000648455.2_116045_Ver_1	24719441	116045
Staphylococcus aureus M0734	1388496	PRJNA216669	216669	Terrabacteria group	Firmicutes	2.87705	32.9	-	JBBH01	56	3029	2850	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325620	GCA_000529035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/035/GCA_000529035.1_Stap_aure_M0734_V1	-	M0734
Staphylococcus aureus M0736	1388497	PRJNA216670	216670	Terrabacteria group	Firmicutes	2.88572	32.9	-	JBBG01	57	3064	2884	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325621	GCA_000529055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/055/GCA_000529055.1_Stap_aure_M0736_V1	-	M0736
Salmonella enterica subsp. enterica serovar Typhimurium str. 104772	1387339	PRJNA215434	215434	Proteobacteria	Gammaproteobacteria	4.94385	52.1	-	JHAG01	112	5078	4858	4/25/14	3/1/17	Scaffold	University of California Irvine	SAMN02692253	GCA_000648475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/475/GCA_000648475.2_104772_ver_1	24719441	104772
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.82358	30.1	-	CUME01	25	1938	1763	3/31/15	4/10/17	Contig	SC	SAMEA1010549	GCA_001238945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/945/GCA_001238945.1_7065_7_3	-	OXC6349
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.96235	37.9	-	LNNY01	16	3012	2924	12/23/15	3/1/17	Contig	FDA	SAMN02769693	GCA_001482165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/165/GCA_001482165.1_ASM148216v1	26950338	MOD1_LS114
Mycobacterium tuberculosis XTB13-192	1427270	PRJNA229666	229666	Terrabacteria group	Actinobacteria	4.39971	65.5	-	JLJB01	4	4280	4113	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419626	GCA_000655275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/275/GCA_000655275.1_Myco_tube_XTB13-192_V1	-	XTB13-192
Escherichia coli EC4203	1005523	PRJNA65915	65915	Proteobacteria	Gammaproteobacteria	5.39113	50.3	-	AKMB01	489	5893	5400	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435928	GCA_000267465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/465/GCA_000267465.2_ASM26746v2	23516226	EC4203
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.14207	39.7	-	CMVE01	98	2333	2025	3/23/15	3/11/17	Contig	SC	SAMEA1022938	GCA_001097905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/905/GCA_001097905.1_5737_8_7	-	208
Helicobacter pylori	210	PRJNA342930	342930	Proteobacteria	delta/epsilon subdivisions	1.58699	38.7	-	MJMW01	30	1573	1425	1/9/17	3/28/17	Contig	National University of Singapore	SAMN05804594	GCA_001940025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/025/GCA_001940025.1_ASM194002v1	-	S380A
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.13048	51.7	-	FEXB01	69	2481	2140	2/9/16	3/21/17	Scaffold	SC	SAMEA2674355	GCA_900024395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/395/GCA_900024395.1_14324_5_18	-	2842STDY5881551
Pseudomonas aeruginosa	287	PRJNA294638	294638	Proteobacteria	Gammaproteobacteria	6.57144	66.2	-	LJNX01	304	6425	6084	10/29/15	3/18/17	Scaffold	Technical University of Denmark	SAMN04028040	GCA_001420245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/245/GCA_001420245.1_ASM142024v1	-	ATCC 33351
Acinetobacter baumannii 722310	1310813	PRJNA194889	194889	Proteobacteria	Gammaproteobacteria	4.04375	39	-	JFCV01	72	3997	3742	2/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02567757	GCA_000583275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/275/GCA_000583275.1_ASM58327v1	-	722310
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.00741	35.4	-	CDDO01	92	2017	1905	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780171	GCA_001399035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/035/GCA_001399035.1_Mother13	-	Mother13
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.32272	41.2	-	FIFW01	56	2359	2187	2/10/16	3/19/17	Contig	SC	SAMEA1316655	GCA_900056165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/165/GCA_900056165.1_7114_5_23	-	LSS23
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.40743	38.2	-	LOLF01	244	3115	2913	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329962	GCA_001601215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/215/GCA_001601215.1_ASM160121v1	-	NY3
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.70471	50.7	-	CWXO01	392	5241	4526	7/17/15	2/24/17	Scaffold	SC	SAMEA2445691	GCA_001255735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/735/GCA_001255735.1_12971_8_12	-	H082120406
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.31689	68	-	CWJC01	74	7545	6928	7/6/15	3/26/17	Scaffold	SC	SAMEA949406	GCA_001182305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/305/GCA_001182305.1_7910_7_30	-	HA
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	4.0889	47.5	-	NMTD01	172	3853	3657	8/31/17	9/2/17	Contig	University of Alberta	SAMN07350479	GCA_002284235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/235/GCA_002284235.1_ASM228423v1	-	OYP5F10
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.28306	28.9	-	FAFL01	1165	3948	3681	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664227	GCA_900010495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/495/GCA_900010495.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.01425	45.3	-	MIRO01	87	4747	4576	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368252	GCA_001726805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/805/GCA_001726805.1_ASM172680v1	-	GCSL_R75
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.60096	57.2	-	LFAT01	12	5547	5296	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280407	GCA_001033895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/895/GCA_001033895.1_Kleb_pneu_MGH118_V1	-	MGH118
Enterococcus faecalis	1351	PRJNA380190	380190	Terrabacteria group	Firmicutes	2.84665	37.5	-	NBDV01	87	2880	2763	4/25/17	4/27/17	Scaffold	Monash University 	SAMN06644839	GCA_002110405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/405/GCA_002110405.1_S15	-	S15
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.98257	37.6	-	JVQH01	350	3040	2863	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197391	GCA_001055845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/845/GCA_001055845.1_ASM105584v1	26230489	199_EFCM
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.78371	67.8	-	CFNP01	681	3777	3184	3/15/15	3/26/17	Scaffold	SC	SAMEA751165	GCA_001331715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/715/GCA_001331715.1_5601_1_1	-	B077
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68854	31.3	-	FBJF01	31	1758	1663	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683305	GCA_001494715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/715/GCA_001494715.1_CCN59	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.65511	55.2	-	FKGS01	39	4636	4388	4/6/16	3/28/17	Scaffold	SC	SAMEA2273243	GCA_900077805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/805/GCA_900077805.1_11983_7_18	-	e812
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.0964	64.2	-	FSOH01	17	5109	5003	12/14/16	3/21/17	Contig	SC	SAMEA2156724	GCA_900140195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/195/GCA_900140195.1_10665_2_72	-	530
Pseudomonas sp. JdFR-91	1935000	PRJNA269163	269163	Proteobacteria	Gammaproteobacteria	3.77001	60.5	-	MTPA01	358	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226408	GCA_002010815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/815/GCA_002010815.1_ASM201081v1	28350381	-
Pseudomonas sp. JdFR-92	1935001	PRJNA269163	269163	Proteobacteria	Gammaproteobacteria	1.61107	59	-	MTPB01	457	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226409	GCA_002010845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/010/845/GCA_002010845.1_ASM201084v1	28350381	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15973	64.1	-	FVVY01	15	5265	5092	3/10/17	3/18/17	Contig	SC	SAMEA2156827	GCA_900140225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/225/GCA_900140225.1_10665_2_96	-	728
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.03885	55	-	FKGT01	57	4957	4717	4/6/16	3/28/17	Scaffold	SC	SAMEA2273482	GCA_900077815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/815/GCA_900077815.1_12045_5_61	-	e813
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.64294	31.4	-	FAZQ01	27	1699	1616	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683052	GCA_001494735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/735/GCA_001494735.1_EC3727	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.80747	67.9	-	CFYR01	519	3752	3253	3/15/15	3/26/17	Scaffold	SC	SAMEA751166	GCA_001331735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/735/GCA_001331735.1_5476_8_10	-	B285
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.07902	37.6	-	JVIG01	259	3191	2987	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197600	GCA_001056605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/605/GCA_001056605.1_ASM105660v1	26230489	41_EFCM
Enterococcus faecalis	1351	PRJNA380190	380190	Terrabacteria group	Firmicutes	3.06414	37.3	-	NBDW01	88	3251	3113	4/25/17	4/27/17	Scaffold	Monash University 	SAMN06644840	GCA_002110435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/435/GCA_002110435.1_S14	-	S14
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.61713	57.3	-	LFAU01	14	5723	5391	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280408	GCA_001033915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/915/GCA_001033915.1_Kleb_pneu_MGH123_V1	-	MGH123
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.01783	45.3	-	MIRP01	82	4748	4573	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368253	GCA_001726815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/815/GCA_001726815.1_ASM172681v1	-	GCSL_R76
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.19633	28.8	-	FALI01	829	3791	3640	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664380	GCA_900010505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/505/GCA_900010505.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.93711	47.6	-	NMTJ01	117	3724	3544	8/31/17	9/2/17	Contig	University of Alberta	SAMN07350473	GCA_002284355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/355/GCA_002284355.1_ASM228435v1	-	OYP3F10
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.03972	68.3	-	CWJF01	70	7248	6763	7/6/15	3/26/17	Scaffold	SC	SAMEA949453	GCA_001182325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/325/GCA_001182325.1_7910_7_24	-	147
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.82707	50.8	-	CWXD01	449	5671	4661	7/16/15	2/24/17	Scaffold	SC	SAMEA2434381	GCA_001255755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/755/GCA_001255755.1_12844_1_54	-	20381207
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.39834	38.2	-	LOLG01	144	3104	2925	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329963	GCA_001601235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/235/GCA_001601235.1_ASM160123v1	-	NY4
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.11734	41.1	-	FIKD01	60	2158	2015	2/10/16	3/19/17	Contig	SC	SAMEA1316579	GCA_900056175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/175/GCA_900056175.1_7054_7_37	-	SS1034
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.00618	35.4	-	CDCT01	85	2018	1910	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780172	GCA_001399055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/055/GCA_001399055.1_Child13	-	Child13
Acinetobacter baumannii 470922	1310808	PRJNA194884	194884	Proteobacteria	Gammaproteobacteria	4.2234	39.3	-	JFCX01	147	4247	3905	2/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02567755	GCA_000583295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/295/GCA_000583295.1_ASM58329v1	-	470922
Pseudomonas aeruginosa	287	PRJNA294638	294638	Proteobacteria	Gammaproteobacteria	6.21103	66.5	-	LJNY01	218	6007	5727	10/29/15	3/18/17	Scaffold	Technical University of Denmark	SAMN04028041	GCA_001420265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/265/GCA_001420265.1_ASM142026v1	-	ATCC 33352
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.17694	51.5	-	FEXR01	90	2527	2148	2/9/16	3/21/17	Scaffold	SC	SAMEA2674500	GCA_900024405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/405/GCA_900024405.1_14355_7_36	-	2842STDY5881665
Helicobacter pylori	210	PRJNA342930	342930	Proteobacteria	delta/epsilon subdivisions	1.6041	38.7	-	MJNA01	25	1596	1438	1/9/17	3/28/17	Contig	National University of Singapore	SAMN05806843	GCA_001940085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/085/GCA_001940085.1_ASM194008v1	-	H30
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08427	39.5	-	CLJF01	56	2286	2058	3/21/15	3/11/17	Contig	SC	SAMEA1029015	GCA_001097945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/945/GCA_001097945.1_6925_7_20	-	SMRU2516
Escherichia coli FDA517	1005473	PRJNA65759	65759	Proteobacteria	Gammaproteobacteria	5.52224	50.2	-	AKKX01	487	6005	5552	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435933	GCA_000267485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/485/GCA_000267485.2_ASM26748v2	23516226	FDA517
Mycobacterium tuberculosis XTB13-193	1427271	PRJNA229667	229667	Terrabacteria group	Actinobacteria	4.44588	65.5	-	JLJA01	8	4319	4132	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419627	GCA_000655295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/295/GCA_000655295.1_Myco_tube_XTB13-193_V1	-	XTB13-193
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.97846	37.8	-	CWKU01	173	3088	2926	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466562	GCA_001487205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/205/GCA_001487205.1_2011_186321_14c	-	-
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66497	30.4	-	CUMX01	17	1755	1663	3/31/15	3/18/17	Contig	SC	SAMEA1010565	GCA_001239025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/025/GCA_001239025.1_7065_7_47	-	OXC6393
Salmonella enterica subsp. enterica serovar Typhimurium str. 108402	1387341	PRJNA215436	215436	Proteobacteria	Gammaproteobacteria	4.98008	52	-	JHAH01	152	5149	4890	4/25/14	3/1/17	Scaffold	University of California Irvine	SAMN02692254	GCA_000648495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/495/GCA_000648495.2_108402_Ver_1	24719441	108402
Staphylococcus aureus M0737	1388498	PRJNA216671	216671	Terrabacteria group	Firmicutes	2.88022	32.8	-	JBBF01	57	3065	2892	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325622	GCA_000529075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/075/GCA_000529075.1_Stap_aure_M0737_V1	-	M0737
Staphylococcus aureus M0739	1388499	PRJNA216672	216672	Terrabacteria group	Firmicutes	2.83823	32.9	-	JBBE01	28	2973	2808	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325623	GCA_000529095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/095/GCA_000529095.1_Stap_aure_M0739_V1	-	M0739
Salmonella enterica subsp. enterica serovar Cerro	340188	PRJNA263759	263759	Proteobacteria	Gammaproteobacteria	4.5156	52.3	-	LELI01	44	4543	4330	6/30/15	2/27/17	Scaffold	Shanghai Jiao Tong University	SAMN03256207	GCA_001043095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/043/095/GCA_001043095.1_ASM104309v1	-	87
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.83249	30.1	-	CUUI01	48	1976	1833	3/31/15	3/18/17	Contig	SC	SAMEA1401066	GCA_001239265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/265/GCA_001239265.1_7213_3_52	-	OXC6595
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.95949	37.9	-	CWNH01	411	3090	2871	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466616	GCA_001487535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/535/GCA_001487535.1_2013_143044_4	-	-
Mycobacterium tuberculosis XTB13-194	1427272	PRJNA229668	229668	Terrabacteria group	Actinobacteria	4.4204	65.6	-	JLIZ01	7	4310	4105	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419628	GCA_000655315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/315/GCA_000655315.1_Myco_tube_XTB13-194_V1	-	XTB13-194
Escherichia coli FRIK1996	1005475	PRJNA65763	65763	Proteobacteria	Gammaproteobacteria	5.43206	50.3	-	AKKY01	536	5965	5450	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435915	GCA_000267505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/505/GCA_000267505.2_ASM26750v2	23516226	FRIK1996
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.04377	39.5	-	CRMO01	58	2219	2004	3/23/15	3/11/17	Contig	SC	SAMEA1024587	GCA_001097965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/965/GCA_001097965.1_6755_3_1	-	SMRU865
Helicobacter pylori	210	PRJNA342930	342930	Proteobacteria	delta/epsilon subdivisions	1.60859	38.7	-	MJNB01	35	1597	1432	1/9/17	3/28/17	Contig	National University of Singapore	SAMN05806844	GCA_001940095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/095/GCA_001940095.1_ASM194009v1	-	H30A
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.09995	51.8	-	FEYE01	69	2459	2122	2/9/16	3/21/17	Scaffold	SC	SAMEA2674447	GCA_900024415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/415/GCA_900024415.1_14355_8_6	-	2842STDY5881731
Pseudomonas aeruginosa	287	PRJNA295428	295428	Proteobacteria	Gammaproteobacteria	6.56363	66.3	-	LKAF01	31	6263	5965	10/29/15	3/18/17	Scaffold	University of aberdeen	SAMN04054214	GCA_001420525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/525/GCA_001420525.1_ASM142052v1	-	Ps2
Acinetobacter baumannii 1552389	1310812	PRJNA194888	194888	Proteobacteria	Gammaproteobacteria	4.02856	39	-	JFCS01	80	3971	3723	2/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02567743	GCA_000583315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/315/GCA_000583315.1_ASM58331v1	-	1552389
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.03757	35.1	-	CDEK01	98	2071	1962	11/5/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780173	GCA_001399075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/075/GCA_001399075.1_Mother14	-	Mother14
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.15038	41.3	-	FIHP01	39	2078	1951	2/10/16	3/19/17	Contig	SC	SAMEA1316694	GCA_900056485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/485/GCA_900056485.1_7114_5_66	-	LSS66
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.4836	38.3	-	LOLE01	178	3183	3008	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329961	GCA_001601245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/245/GCA_001601245.1_ASM160124v1	-	NY2
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.65808	50.7	-	CWYZ01	431	5163	4458	7/16/15	2/24/17	Scaffold	SC	SAMEA2445733	GCA_001255775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/775/GCA_001255775.1_12971_8_45	-	H111560296
Burkholderia pseudomallei	28450	PRJNA290133	290133	Proteobacteria	Betaproteobacteria	7.24103	68.1	-	LGKL01	36	7518	6915	7/22/15	7/19/17	Scaffold	Menzies School of Health Research	SAMN03480015	GCA_001186165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/165/GCA_001186165.1_ASM118616v1	-	MSHR0169
Vibrio cholerae VC0101557	1352358	PRJNA209926	209926	Proteobacteria	Gammaproteobacteria	3.86305	47.4	-	ATNJ01	54	3565	3482	10/2/17	10/2/17	Contig	Chunlab Inc.	SAMN02215344	GCA_002407455.1	-	-	-	VC0101557
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.73514	29.2	-	FANT01	1588	4375	4104	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664440	GCA_900010515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/515/GCA_900010515.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.01446	45.3	-	MIRQ01	76	4744	4578	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368254	GCA_001726845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/845/GCA_001726845.1_ASM172684v1	-	GCSL_R77
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.52856	57.3	-	LFAV01	4	5492	5245	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280409	GCA_001033925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/925/GCA_001033925.1_Kleb_pneu_MGH124_V1	-	MGH124
Enterococcus faecalis	1351	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.86464	37.5	-	NGMZ01	4	2870	2710	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634034	GCA_002140335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/335/GCA_002140335.1_ASM214033v1	-	11D3_DIV0676
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.98943	37.6	-	JVHJ01	352	3066	2885	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197623	GCA_001056745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/745/GCA_001056745.1_ASM105674v1	26230489	43_EFCM
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.69675	67.6	-	CHKX01	931	3739	3001	4/21/15	3/26/17	Scaffold	SC	SAMEA751167	GCA_001331755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/755/GCA_001331755.1_5476_7_9	-	B041
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.5653	31.8	-	FBKL01	36	1567	1509	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683338	GCA_001494755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/755/GCA_001494755.1_H090980249	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.27206	55	-	FKGV01	61	5186	4948	4/6/16	3/28/17	Scaffold	SC	SAMEA2273244	GCA_900077825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/825/GCA_900077825.1_11983_7_19	-	e815
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.83582	64.2	-	FVVV01	15	4793	4682	3/10/17	3/18/17	Contig	SC	SAMEA2162857	GCA_900140245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/245/GCA_900140245.1_10665_2_74	-	533
Pseudomonas sp. JdFR-93	1935002	PRJNA269163	269163	Proteobacteria	Gammaproteobacteria	2.23023	59.2	-	MTPC01	225	-	-	3/2/17	5/15/17	Contig	University of Hawaii	SAMN06226410	GCA_002011825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/011/825/GCA_002011825.1_ASM201182v1	28350381	-
Pseudomonas sp. VI4.1	1941346	PRJNA369436	369436	Proteobacteria	Gammaproteobacteria	7.34631	60	-	MULM01	185	6792	5951	3/15/17	3/15/17	Contig	Hasselt University	SAMN06286298	GCA_002029345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/345/GCA_002029345.1_ASM202934v1	-	VI4.1
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.09806	64.1	-	FVVX01	23	5099	4995	3/10/17	3/18/17	Contig	SC	SAMEA1971262	GCA_900140255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/255/GCA_900140255.1_10665_2_91	-	648
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.13616	55	-	FKGY01	81	5123	4862	4/6/16	3/28/17	Scaffold	SC	SAMEA2273245	GCA_900077835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/835/GCA_900077835.1_11983_7_20	-	e818
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.72237	31.2	-	FBPW01	58	1767	1641	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683472	GCA_001494795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/795/GCA_001494795.1_H102680185	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.81399	67.9	-	CFZQ01	300	3673	3301	3/15/15	3/26/17	Scaffold	SC	SAMEA751170	GCA_001331775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/775/GCA_001331775.1_5601_3_12	-	B335
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.16254	37.7	-	JVFZ01	233	3277	3044	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197659	GCA_001056925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/925/GCA_001056925.1_ASM105692v1	26230489	465_EFCM
Enterococcus faecalis	1351	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.872	37.5	-	NGMY01	2	2863	2713	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634061	GCA_002140345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/345/GCA_002140345.1_ASM214034v1	-	11D3_DIV0676_a
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.65747	57	-	LFAW01	22	5779	5523	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280410	GCA_001033965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/965/GCA_001033965.1_Kleb_pneu_MGH125_V1	-	MGH125
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.18072	45.2	-	MIRS01	111	4943	4775	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368256	GCA_001726855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/855/GCA_001726855.1_ASM172685v1	-	GCSL_R87
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.30921	29.1	-	CZXM01	1969	3991	3701	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664006	GCA_900010825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/825/GCA_900010825.1_Peptoclostridium_difficile	-	-
Vibrio cholerae B33	417400	PRJNA33557	33557	Proteobacteria	Gammaproteobacteria	4.1547	47.4	-	ACHZ01	17	4011	3829	5/1/09	5/19/17	Scaffold	"Los Alamos National Laboratory, National Microbial Pathogen Data Resource (NMPDR)"	SAMN02393810	GCA_000174315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/315/GCA_000174315.1_ASM17431v1	19850044	B33
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.09183	68.2	-	CSQC01	73	7312	6786	3/23/15	3/26/17	Scaffold	SC	SAMEA807037	GCA_001191815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/815/GCA_001191815.1_7907_5_32	-	C32
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.74339	50.8	-	CXIE01	390	5351	4574	7/17/15	2/24/17	Scaffold	SC	SAMEA2003853	GCA_001255815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/815/GCA_001255815.1_8289_7_64	-	83010
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.37037	38.2	-	LOLH01	386	3094	2864	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329964	GCA_001601325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/325/GCA_001601325.1_ASM160132v1	-	NY5
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.21912	41	-	FIHQ01	26	2251	2085	2/10/16	3/19/17	Contig	SC	SAMEA1316530	GCA_900056495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/495/GCA_900056495.1_7114_5_67	-	LSS67
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.03561	35.1	-	CDDQ01	86	2073	1966	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780174	GCA_001399095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/095/GCA_001399095.1_Child14	-	Child14
Acinetobacter baumannii 1488685	1310807	PRJNA194883	194883	Proteobacteria	Gammaproteobacteria	4.11453	38.9	-	JFCT01	90	4090	3841	2/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02567735	GCA_000583335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/335/GCA_000583335.1_ASM58333v1	-	1488685
Pseudomonas aeruginosa	287	PRJNA295426	295426	Proteobacteria	Gammaproteobacteria	6.56281	66.3	-	LKAE01	30	6264	5967	10/29/15	3/18/17	Scaffold	University of aberdeen	SAMN04054213	GCA_001420535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/535/GCA_001420535.1_ASM142053v1	-	Ps1
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.10464	51.8	-	FEYM01	75	2450	2113	2/9/16	3/19/17	Scaffold	SC	SAMEA2674107	GCA_900024425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/425/GCA_900024425.1_14555_5_3	-	2842STDY5881344
Helicobacter pylori	210	PRJNA342930	342930	Proteobacteria	delta/epsilon subdivisions	1.57025	38.8	-	MJMY01	32	1566	1405	1/9/17	3/28/17	Contig	National University of Singapore	SAMN05804676	GCA_001940115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/115/GCA_001940115.1_ASM194011v1	-	H9A
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06055	39.6	-	CODU02	166	2219	2025	3/23/15	3/5/17	Contig	SC	SAMEA1462969	GCA_001097985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/985/GCA_001097985.2_7622_4_3	-	GL3077
Escherichia coli FRIK1985	1005476	PRJNA65765	65765	Proteobacteria	Gammaproteobacteria	5.53863	50.3	-	AKKZ01	671	6090	5571	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435986	GCA_000267525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/525/GCA_000267525.2_ASM26752v2	23516226	FRIK1985
Mycobacterium tuberculosis XTB13-195	1427273	PRJNA229669	229669	Terrabacteria group	Actinobacteria	4.42489	65.6	-	JLIY01	11	4313	4112	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419629	GCA_000655335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/335/GCA_000655335.1_Myco_tube_XTB13-195_V1	-	XTB13-195
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.02552	37.8	-	CWLV01	132	3136	2997	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466571	GCA_001487775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/487/775/GCA_001487775.1_2012_292995_14	-	-
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66609	30.4	-	CUPC01	21	1755	1657	3/31/15	3/18/17	Contig	SC	SAMEA1010612	GCA_001239305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/305/GCA_001239305.1_7092_1_12	-	OXC6459
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA284328	284328	Proteobacteria	Gammaproteobacteria	4.94195	52.1	-	LIHI01	83	5134	4824	9/4/15	2/28/17	Scaffold	National Institute of Health Dr Ricardo Jorge	SAMN03701441	GCA_001280185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/185/GCA_001280185.1_ASM128018v1	-	LV60
Staphylococcus aureus M0742	1388501	PRJNA216674	216674	Terrabacteria group	Firmicutes	2.8841	32.9	-	JBBC01	69	3063	2888	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325625	GCA_000529115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/115/GCA_000529115.1_Stap_aure_M0742_V1	-	M0742
Staphylococcus aureus M0625	1388502	PRJNA216675	216675	Terrabacteria group	Firmicutes	2.88684	32.8	-	JBBB01	30	3065	2898	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325626	GCA_000529135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/135/GCA_000529135.1_Stap_aure_M0625_V1	-	M0625
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA292405	292405	Proteobacteria	Gammaproteobacteria	5.01444	52.1	-	LIDY01	113	5224	4893	9/21/15	2/28/17	Scaffold	Hospital Universitario La Paz	SAMN03975954	GCA_001295155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/155/GCA_001295155.1_ASM129515v1	26384861	StVIM
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.65224	30.4	-	CUID01	19	1713	1601	3/31/15	3/18/17	Contig	SC	SAMEA1010262	GCA_001239325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/325/GCA_001239325.1_7038_3_22	-	OXC6271
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.07868	37.9	-	CWLH01	173	3281	3019	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466570	GCA_001488015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/015/GCA_001488015.1_2012_286536_3	-	-
Mycobacterium tuberculosis XTB13-196	1427274	PRJNA229670	229670	Terrabacteria group	Actinobacteria	4.41537	65.6	-	JLIX01	6	4302	4102	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419630	GCA_000655355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/355/GCA_000655355.1_Myco_tube_XTB13-196_V1	-	XTB13-196
Escherichia coli TW09195	1005521	PRJNA65911	65911	Proteobacteria	Gammaproteobacteria	5.46883	50.7	-	AKLZ01	1163	6054	5486	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435922	GCA_000267585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/585/GCA_000267585.2_ASM26758v2	23516226	TW09195
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10081	39.5	-	CLPQ01	55	2287	2048	3/21/15	3/11/17	Contig	SC	SAMEA1028977	GCA_001098025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/025/GCA_001098025.1_6949_3_23	-	SMRU2471
Helicobacter pylori	210	PRJNA342930	342930	Proteobacteria	delta/epsilon subdivisions	1.59282	38.7	-	MJMT01	31	1582	1422	1/9/17	3/28/17	Contig	National University of Singapore	SAMN05791023	GCA_001940145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/145/GCA_001940145.1_ASM194014v1	-	178A
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11759	51.8	-	FEZJ01	62	2474	2117	2/9/16	3/21/17	Scaffold	SC	SAMEA2674178	GCA_900024435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/435/GCA_900024435.1_14555_5_26	-	2842STDY5881367
Pseudomonas aeruginosa PAHM4	1146882	PRJNA82925	82925	Proteobacteria	Gammaproteobacteria	6.37258	66.2	-	AYSZ01	281	6100	5755	11/4/15	3/18/17	Scaffold	University of Virginia	SAMN03247002	GCA_001431165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/165/GCA_001431165.1_PAHM4v1	26519161	PAHM4
Acinetobacter baumannii 1426993	1310805	PRJNA194881	194881	Proteobacteria	Gammaproteobacteria	4.23364	39.4	-	JFCU01	127	4222	3906	2/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02567734	GCA_000583355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/355/GCA_000583355.1_ASM58335v1	-	1426993
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.09601	35.4	-	CDEG01	87	2136	2041	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780175	GCA_001399115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/115/GCA_001399115.1_Mother15	-	Mother15
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.11086	41.2	-	FIIB01	40	2149	2008	2/10/16	3/19/17	Contig	SC	SAMEA1316562	GCA_900056505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/505/GCA_900056505.1_7114_5_78	-	LSS78
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.37136	38.2	-	LOLI01	136	3089	2882	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329965	GCA_001601355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/355/GCA_001601355.1_ASM160135v1	-	NY6
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.54924	50.7	-	CWTI01	369	5121	4295	7/16/15	2/24/17	Scaffold	SC	SAMEA3345025	GCA_001255855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/855/GCA_001255855.1_H14094030901	-	30901ss_1
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08482	68.2	-	CSQF01	66	7299	6786	3/23/15	3/26/17	Scaffold	SC	SAMEA806992	GCA_001192415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/415/GCA_001192415.1_7909_4_3	-	C36
Vibrio cholerae CP1116	1294275	PRJNA181020	181020	Proteobacteria	Gammaproteobacteria	3.93271	47.4	-	ANNM01	207	3645	3512	5/2/13	3/23/17	Scaffold	CosmosID	SAMN02469663	GCA_000387725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/725/GCA_000387725.1_BJG-01	-	CP1116
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.20309	28.9	-	CZWY01	813	3785	3651	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664019	GCA_900010855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/855/GCA_900010855.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	4.89455	45.4	-	MIRR01	116	4619	4440	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368255	GCA_001726885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/885/GCA_001726885.1_ASM172688v1	-	GCSL_R86
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.48034	57.2	-	LFAX01	11	5491	5248	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280411	GCA_001033975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/975/GCA_001033975.1_Kleb_pneu_MGH126_V1	-	MGH126
Enterococcus faecalis	1351	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.84224	37.8	-	NGMW01	5	2822	2685	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04633994	GCA_002140925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/925/GCA_002140925.1_ASM214092v1	-	9A2_4861
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.94985	37.6	-	JUWL01	422	3016	2873	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197907	GCA_001058945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/945/GCA_001058945.1_ASM105894v1	26230489	702_EFCM
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.75379	67.7	-	CFXL01	961	3808	3072	3/15/15	3/27/17	Scaffold	SC	SAMEA751171	GCA_001331795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/795/GCA_001331795.1_5601_5_1	-	B319
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.70255	31.3	-	FBJR01	38	1784	1677	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683317	GCA_001494815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/815/GCA_001494815.1_EC0349	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.11593	54.8	-	FKGU01	54	5063	4819	4/6/16	3/28/17	Scaffold	SC	SAMEA2273246	GCA_900077845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/845/GCA_900077845.1_11983_7_21	-	e829
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96693	64.2	-	FVWA01	19	4905	4768	3/10/17	3/18/17	Contig	SC	SAMEA2070433	GCA_900140315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/315/GCA_900140315.1_10665_3_24	-	194
Pseudomonas sp. PGPPP1	2015553	PRJNA340070	340070	Proteobacteria	Gammaproteobacteria	6.86796	60.1	-	NKIG01	124	6347	6158	8/16/17	8/16/17	Contig	CNRS-AMU	SAMN07280687	GCA_002255865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/865/GCA_002255865.1_ASM225586v1	-	-
Pseudomonas sp. PGPPP4	2015556	PRJNA340070	340070	Proteobacteria	Gammaproteobacteria	4.88442	66	-	NKID01	28	4500	4385	8/16/17	8/16/17	Contig	CNRS-AMU	SAMN07280690	GCA_002256045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/045/GCA_002256045.1_ASM225604v1	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96029	64.2	-	FSON01	20	4895	4755	12/14/16	3/21/17	Contig	SC	SAMEA2071290	GCA_900140325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/325/GCA_900140325.1_10665_3_26	-	196
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.63821	55.5	-	FKGX01	32	4469	4287	4/6/16	3/28/17	Scaffold	SC	SAMEA2273247	GCA_900077855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/855/GCA_900077855.1_11983_7_22	-	e832
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66057	31.4	-	FBCW01	23	1716	1626	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683132	GCA_001494835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/835/GCA_001494835.1_EC4242	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.78704	67.7	-	CHLB01	880	3793	3125	4/21/15	3/26/17	Scaffold	SC	SAMEA751172	GCA_001331815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/815/GCA_001331815.1_5601_5_3	-	B308
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.00459	37.7	-	JULU01	312	3078	2934	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198184	GCA_001059685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/685/GCA_001059685.1_ASM105968v1	26230489	964_EFCM
Enterococcus faecalis	1351	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.9033	38.5	-	NGMX01	28	2820	2598	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04633996	GCA_002140985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/985/GCA_002140985.1_ASM214098v1	-	9F2_4866
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.68314	57	-	LFAY01	7	5625	5281	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280412	GCA_001033995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/033/995/GCA_001033995.1_Kleb_pneu_BIDMC85_V1	-	BIDMC85
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.18418	45.2	-	MIRT01	90	4968	4779	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368257	GCA_001726895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/895/GCA_001726895.1_ASM172689v1	-	GCSL_R88
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.22408	28.9	-	CZWX01	1070	3823	3646	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664012	GCA_900010875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/875/GCA_900010875.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.02799	47.5	-	JSCC01	108	3827	3635	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104850	GCA_000788415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/415/GCA_000788415.1_ASM78841v1	25538191	2010AA-143
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.09566	68.2	-	CSOW01	73	7308	6788	3/22/15	3/26/17	Scaffold	SC	SAMEA807040	GCA_001192815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/815/GCA_001192815.1_7909_4_25	-	C58
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.74249	50.5	-	CXBP01	491	5077	4493	7/16/15	2/24/17	Scaffold	SC	SAMEA954860	GCA_001255875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/875/GCA_001255875.1_5236_1_3	-	ShIB697_440729
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.49877	38.3	-	LOLL01	157	3209	3012	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329968	GCA_001601375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/375/GCA_001601375.1_ASM160137v1	-	NY9
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.20889	40.9	-	FIIC01	64	2173	2051	2/10/16	3/19/17	Contig	SC	SAMEA1316546	GCA_900056515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/515/GCA_900056515.1_7114_5_79	-	LSS79
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.09354	35.4	-	CDCS01	64	2135	2046	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780177	GCA_001399135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/135/GCA_001399135.1_Child15-1	-	Child15-1
Acinetobacter baumannii 121738	1310818	PRJNA194894	194894	Proteobacteria	Gammaproteobacteria	4.04469	39.2	-	JFDB01	94	3976	3651	2/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02567733	GCA_000583375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/375/GCA_000583375.1_ASM58337v1	-	121738
Pseudomonas aeruginosa	287	PRJNA294638	294638	Proteobacteria	Gammaproteobacteria	6.64501	66.3	-	LJZB01	138	6371	6132	11/17/15	3/18/17	Scaffold	Technical University of Denmark	SAMN04028044	GCA_001444765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/765/GCA_001444765.1_ASM144476v1	-	ATCC 33355
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12067	51.7	-	FFCU01	94	2473	2165	2/9/16	3/19/17	Scaffold	SC	SAMEA2674185	GCA_900024445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/445/GCA_900024445.1_14555_6_22	-	2842STDY5881459
Helicobacter pylori	210	PRJNA342930	342930	Proteobacteria	delta/epsilon subdivisions	1.58404	38.7	-	MJMU01	27	1571	1407	1/9/17	3/28/17	Contig	National University of Singapore	SAMN05791070	GCA_001940175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/175/GCA_001940175.1_ASM194017v1	-	1177
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.05527	39.7	-	CMHL01	74	2262	2029	3/23/15	3/11/17	Contig	SC	SAMEA1029221	GCA_001098205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/205/GCA_001098205.1_7038_5_7	-	SMRU2959
Escherichia coli TW09098	1005519	PRJNA65907	65907	Proteobacteria	Gammaproteobacteria	5.4833	50.4	-	AKLX01	441	5981	5473	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435952	GCA_000267605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/605/GCA_000267605.2_ASM26760v2	23516226	TW09098
Mycobacterium tuberculosis XTB13-197	1427275	PRJNA229671	229671	Terrabacteria group	Actinobacteria	4.42631	65.6	-	JLIW01	6	4306	4101	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419631	GCA_000655375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/375/GCA_000655375.1_Myco_tube_XTB13-197_V1	-	XTB13-197
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.99056	37.9	-	CWLF01	62	3076	2945	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466592	GCA_001488235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/235/GCA_001488235.1_2012_318878_16	-	-
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70151	30.5	-	CUTU01	27	1807	1706	3/31/15	3/18/17	Contig	SC	SAMEA1401654	GCA_001239365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/365/GCA_001239365.1_7213_3_37	-	OXC6580
Salmonella enterica subsp. enterica	59201	PRJNA313028	313028	Proteobacteria	Gammaproteobacteria	4.80438	52.1	-	LTDW01	27	4954	4679	3/16/16	3/1/17	Scaffold	University of Campinas	SAMN04498378	GCA_001592925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/925/GCA_001592925.1_ASM159292v1	27174265	PT4_IOC4647/2004
Staphylococcus aureus M0635	1388503	PRJNA216676	216676	Terrabacteria group	Firmicutes	2.89429	33	-	JBBA01	19	3028	2863	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02325627	GCA_000529155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/155/GCA_000529155.1_Stap_aure_M0635_V1	-	M0635
Staphylococcus aureus M0650	1388504	PRJNA216677	216677	Terrabacteria group	Firmicutes	2.92411	32.9	-	JBAZ01	25	3093	2927	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325628	GCA_000529175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/175/GCA_000529175.1_Stap_aure_M0650_V1	-	M0650
Salmonella enterica subsp. enterica	59201	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	5.20294	52.1	-	LSZD01	257	5389	5148	5/19/16	3/1/17	Scaffold	U.S. Food and Drug Administration	SAMN04501080	GCA_001647955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/955/GCA_001647955.1_ASM164795v1	-	SE163A
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.73484	30.2	-	CUKK01	23	1825	1687	3/31/15	3/18/17	Contig	SC	SAMEA1010284	GCA_001239485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/485/GCA_001239485.1_7038_3_77	-	OXC6327
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.04178	37.9	-	CWLQ01	68	3122	2971	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466587	GCA_001488255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/255/GCA_001488255.1_2012_313587_8	-	-
Mycobacterium tuberculosis XTB13-198	1427276	PRJNA229672	229672	Terrabacteria group	Actinobacteria	4.42094	65.6	-	JLIV01	4	4299	4116	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419632	GCA_000655395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/395/GCA_000655395.1_Myco_tube_XTB13-198_V1	-	XTB13-198
Escherichia coli TW07945	1005516	PRJNA65901	65901	Proteobacteria	Gammaproteobacteria	5.36228	50.3	-	AKLU01	356	5758	5290	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435980	GCA_000267625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/625/GCA_000267625.2_ASM26762v2	23516226	TW07945
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.0862	39.7	-	CMTZ01	82	2239	1947	3/23/15	3/11/17	Contig	SC	SAMEA1022830	GCA_001098245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/245/GCA_001098245.1_5737_5_3	-	FRV026
Helicobacter pylori	210	PRJNA342930	342930	Proteobacteria	delta/epsilon subdivisions	1.61034	38.7	-	MJMZ01	27	1586	1430	1/9/17	3/28/17	Contig	National University of Singapore	SAMN05804677	GCA_001940185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/185/GCA_001940185.1_ASM194018v1	-	S468A
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15838	51.5	-	FFDJ01	93	2508	2138	2/9/16	3/21/17	Scaffold	SC	SAMEA2674227	GCA_900024925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/925/GCA_900024925.1_14555_6_37	-	2842STDY5881474
Pseudomonas aeruginosa	287	PRJNA294638	294638	Proteobacteria	Gammaproteobacteria	6.37741	66.5	-	LJZC01	152	6154	5920	11/17/15	3/18/17	Scaffold	Technical University of Denmark	SAMN04028045	GCA_001444815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/815/GCA_001444815.1_ASM144481v1	-	ATCC 33356
Acinetobacter baumannii 472237-120	1310828	PRJNA194904	194904	Proteobacteria	Gammaproteobacteria	4.05056	39	-	JFCW01	91	3976	3735	2/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02567756	GCA_000583415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/415/GCA_000583415.1_ASM58341v1	-	472237-120
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.09323	35.4	-	CDDR01	63	2131	2042	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780178	GCA_001399155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/155/GCA_001399155.1_Child15-2	-	Child15-2
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.11681	41.3	-	FIIF01	35	2137	1981	2/10/16	3/19/17	Contig	SC	SAMEA1316709	GCA_900056525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/525/GCA_900056525.1_7114_5_82	-	LSS82
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.49691	38.3	-	LOLP01	102	3194	3010	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329972	GCA_001601395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/395/GCA_001601395.1_ASM160139v1	-	NY13
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.80157	50.7	-	CWVY01	401	5457	4576	7/16/15	2/24/17	Scaffold	SC	SAMEA3345088	GCA_001255895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/895/GCA_001255895.1_Sg_201401842_GAGTGG_L001	-	201401842_1
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08531	68.2	-	CSSB01	69	7306	6795	3/23/15	3/26/17	Scaffold	SC	SAMEA807058	GCA_001193035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/035/GCA_001193035.1_7907_5_30	-	C30
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.02665	47.5	-	JSDO01	125	3812	3627	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03103686	GCA_000788425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/425/GCA_000788425.1_ASM78842v1	25538191	2010AA-142
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.12286	28.7	-	CZWT01	675	3796	3620	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664001	GCA_900010885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/885/GCA_900010885.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.12317	45.2	-	MIRU01	103	4825	4647	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368259	GCA_001726915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/915/GCA_001726915.1_ASM172691v1	-	GCSL_R95
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.59898	57.3	-	LFAZ01	3	5505	5244	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280413	GCA_001034005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/005/GCA_001034005.1_Kleb_pneu_BIDMC86_V1	-	BIDMC86
Enterococcus faecalis	1351	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.94254	37.6	-	NGMP01	8	2938	2796	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634029	GCA_002141205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/205/GCA_002141205.1_ASM214120v1	-	2A11_DIV0231
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.98652	37.7	-	JUKT01	334	3061	2915	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198211	GCA_001059755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/755/GCA_001059755.1_ASM105975v1	26230489	990_EFCM
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.75521	67.7	-	CIBC01	756	3785	3132	4/21/15	3/27/17	Scaffold	SC	SAMEA751173	GCA_001331835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/835/GCA_001331835.1_5601_2_8	-	B089
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.77825	31.1	-	FBGG01	65	1834	1697	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683229	GCA_001494855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/855/GCA_001494855.1_A12B2	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.12498	55.3	-	FKGZ01	52	5083	4839	4/6/16	3/28/17	Scaffold	SC	SAMEA2273248	GCA_900077865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/865/GCA_900077865.1_11983_7_23	-	e833
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.0515	64	-	FVWD01	37	5055	4914	3/10/17	3/18/17	Contig	SC	SAMEA2070535	GCA_900140335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/335/GCA_900140335.1_10665_3_39	-	209
Pseudomonas sp. Ea RS28	1960919	PRJNA291470	291470	Proteobacteria	Gammaproteobacteria	7.32205	61.2	-	MWTP01	2436	7445	7064	3/14/17	3/14/17	Scaffold	University of Florence	SAMN06345439	GCA_002027165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/165/GCA_002027165.1_ASM202716v1	-	Ea RS28
Pseudomonas sp. PGPPP2	2015554	PRJNA340070	340070	Proteobacteria	Gammaproteobacteria	6.05457	59.7	-	NKIF01	78	5563	5383	8/16/17	8/16/17	Scaffold	CNRS-AMU	SAMN07280688	GCA_002255825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/255/825/GCA_002255825.1_ASM225582v1	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96644	64.2	-	FSOM01	17	4906	4764	12/14/16	3/21/17	Contig	SC	SAMEA2070839	GCA_900140345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/345/GCA_900140345.1_10665_3_25	-	195
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.80598	55.4	-	FKHA01	22	4729	4521	4/6/16	3/28/17	Scaffold	SC	SAMEA2273249	GCA_900077875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/875/GCA_900077875.1_11983_7_24	-	e840
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66063	31.4	-	FBIN01	34	1716	1631	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683286	GCA_001494875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/875/GCA_001494875.1_EC3381	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.71967	67.6	-	CGHD01	1185	3789	2984	3/15/15	3/26/17	Scaffold	SC	SAMEA751175	GCA_001331855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/855/GCA_001331855.1_5633_3_1	-	B069
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.05688	37.7	-	JULR01	286	3154	2977	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198187	GCA_001059965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/965/GCA_001059965.1_ASM105996v1	26230489	967_EFCM
Enterococcus faecalis	1351	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.95335	37.7	-	NGMU01	6	2987	2840	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634022	GCA_002141395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/395/GCA_002141395.1_ASM214139v1	-	8A4_DIV03286
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.80623	56.9	-	LFBB01	8	5882	5564	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280415	GCA_001034055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/055/GCA_001034055.1_Kleb_pneu_BIDMC89_V1	-	BIDMC89
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	4.93158	45.3	-	MIRV01	111	4657	4471	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN03358821	GCA_001726935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/935/GCA_001726935.1_ASM172693v1	-	GCSL_R96
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.42057	28.4	-	CZZQ01	264	4118	3981	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664075	GCA_900010895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/895/GCA_900010895.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.02683	47.5	-	JSSV01	87	3825	3629	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104851	GCA_000788435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/435/GCA_000788435.1_ASM78843v1	25538191	2010AA-144
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.0166	68.3	-	CSKD01	75	7236	6760	3/23/15	3/26/17	Scaffold	SC	SAMEA949450	GCA_001193375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/375/GCA_001193375.1_7910_7_23	-	4044-138
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.98893	50.4	-	CWXE01	517	5838	4810	7/16/15	2/24/17	Scaffold	SC	SAMEA2434380	GCA_001255935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/935/GCA_001255935.1_12844_1_53	-	20426788
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.4948	38.3	-	LOLQ01	108	3196	3014	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329973	GCA_001601415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/415/GCA_001601415.1_ASM160141v1	-	NY14
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.07639	41.1	-	FILJ01	28	2087	1980	2/10/16	8/21/17	Contig	SC	SAMEA1316621	GCA_900056535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/535/GCA_900056535.1_7054_7_6	-	SS970
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.04905	35.4	-	CDDP01	92	2075	1970	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780179	GCA_001399175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/175/GCA_001399175.1_Mother16	-	Mother16
Acinetobacter baumannii 24860_8	1310842	PRJNA194918	194918	Proteobacteria	Gammaproteobacteria	4.06482	39.2	-	JFDC01	109	4040	3787	2/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02567751	GCA_000583435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/435/GCA_000583435.1_ASM58343v1	-	24860_8
Pseudomonas aeruginosa	287	PRJNA294638	294638	Proteobacteria	Gammaproteobacteria	6.42453	66.1	-	LJZD01	208	6227	5922	11/17/15	3/18/17	Scaffold	Technical University of Denmark	SAMN04028046	GCA_001444835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/835/GCA_001444835.1_ASM144483v1	-	ATCC 33357
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12789	51.7	-	FEPR01	88	2491	2145	2/9/16	3/21/17	Scaffold	SC	SAMEA2674378	GCA_900025435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/435/GCA_900025435.1_14324_5_41	-	2842STDY5881574
Helicobacter pylori	210	PRJNA351759	351759	Proteobacteria	delta/epsilon subdivisions	1.61903	39	-	MOEF01	28	1592	1434	1/31/17	3/29/17	Contig	University of Malaya - University of Western Australia	SAMN05954258	GCA_001976105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/105/GCA_001976105.1_ASM197610v1	-	UM400b
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05326	39.6	-	COCX02	129	2208	1979	3/23/15	3/5/17	Contig	SC	SAMEA1463265	GCA_001098445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/445/GCA_001098445.2_7622_3_89	-	GL3040
Escherichia coli PA42	1005510	PRJNA65889	65889	Proteobacteria	Gammaproteobacteria	5.39095	50.3	-	AKLS01	433	5843	5389	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435979	GCA_000267645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/645/GCA_000267645.2_ASM26764v2	-	PA42
Mycobacterium tuberculosis XTB13-199	1427277	PRJNA229673	229673	Terrabacteria group	Actinobacteria	4.40529	65.6	-	JLIU01	20	4282	4114	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419633	GCA_000655415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/415/GCA_000655415.1_Myco_tube_XTB13-199_V1	-	XTB13-199
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.00474	37.9	-	CWNI01	367	3108	2880	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466618	GCA_001488275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/275/GCA_001488275.1_2013_72492_1	-	-
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.82489	30.2	-	CURX01	23	1932	1794	3/31/15	3/18/17	Contig	SC	SAMEA1010479	GCA_001239645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/645/GCA_001239645.1_7092_1_8	-	OXC6455
Salmonella enterica subsp. enterica serovar Minnesota	70803	PRJNA321346	321346	Proteobacteria	Gammaproteobacteria	4.7444	52.0523	plasmid pSAL65505:NZ_CM004485.1/CM004485.1	LXWM01	105	4978	4547	7/6/16	3/1/17	Scaffold	University of Sao Paulo	SAMN04992705	GCA_001680585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/585/GCA_001680585.1_ASM168058v1	-	SAL65505
Staphylococcus aureus M0675	1388506	PRJNA216679	216679	Terrabacteria group	Firmicutes	2.88313	32.9	-	JBAX01	29	3055	2889	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325630	GCA_000529195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/195/GCA_000529195.1_Stap_aure_M0675_V1	-	M0675
Staphylococcus aureus M0688	1388507	PRJNA216680	216680	Terrabacteria group	Firmicutes	2.88554	32.9	-	JBAW01	14	3029	2867	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02325631	GCA_000529255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/255/GCA_000529255.1_Stap_aure_M0688_V1	-	M0688
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA327743	327743	Proteobacteria	Gammaproteobacteria	4.75198	52.2	-	MATB01	66	4893	4624	7/22/16	3/1/17	Scaffold	Health Canada	SAMN05356920	GCA_001691885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/885/GCA_001691885.1_ASM169188v1	-	SI01
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.72721	30.3	-	CUKV01	19	1836	1708	3/31/15	3/18/17	Contig	SC	SAMEA1010562	GCA_001239685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/685/GCA_001239685.1_7038_3_86	-	OXC6336
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.01239	37.9	-	CWNF01	334	3180	2921	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466613	GCA_001488395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/395/GCA_001488395.1_2012_195088_3	-	-
Mycobacterium tuberculosis XTB13-200	1427278	PRJNA229674	229674	Terrabacteria group	Actinobacteria	4.41921	65.6	-	JLIT01	11	4309	4109	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419634	GCA_000655435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/435/GCA_000655435.1_Myco_tube_XTB13-200_V1	-	XTB13-200
Escherichia coli PA41	1005509	PRJNA65887	65887	Proteobacteria	Gammaproteobacteria	5.4739	50.3	-	AKLR01	525	5991	5496	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00769924	GCA_000267665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/665/GCA_000267665.2_ASM26766v2	-	PA41
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.1382	39.6	-	CLNA01	77	2346	2128	3/21/15	3/11/17	Contig	SC	SAMEA1029161	GCA_001098465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/465/GCA_001098465.1_6938_8_15	-	SMRU2727
Helicobacter pylori	210	PRJNA351760	351760	Proteobacteria	delta/epsilon subdivisions	1.61782	39	-	MOEE01	30	1596	1429	1/31/17	3/29/17	Contig	University of Malaya - University of Western Australia	SAMN05954259	GCA_001976125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/976/125/GCA_001976125.1_ASM197612v1	-	UM400bM
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.20552	51.6	-	FEPU01	91	2593	2205	2/9/16	3/21/17	Scaffold	SC	SAMEA2674391	GCA_900025445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/445/GCA_900025445.1_14324_5_54	-	2842STDY5881587
Pseudomonas aeruginosa	287	PRJNA294638	294638	Proteobacteria	Gammaproteobacteria	6.5244	66.1	-	LJZH01	316	6354	5958	11/17/15	3/18/17	Scaffold	Technical University of Denmark	SAMN04028050	GCA_001444845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/845/GCA_001444845.1_ASM144484v1	-	ATCC 33361
Acinetobacter baumannii 7893	1310810	PRJNA194886	194886	Proteobacteria	Gammaproteobacteria	4.28358	39.2	-	JFDK01	149	4329	4022	2/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02567758	GCA_000583455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/455/GCA_000583455.1_ASM58345v1	-	7893
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.04392	35.4	-	CDEE01	176	2077	1957	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780180	GCA_001399195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/195/GCA_001399195.1_Child16	-	Child16
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.03192	41.2	-	FILI01	23	2025	1923	2/10/16	3/19/17	Contig	SC	SAMEA1316649	GCA_900056545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/545/GCA_900056545.1_7054_7_8	-	SS973
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.49675	38.3	-	LOLO01	152	3218	2981	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329971	GCA_001601425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/425/GCA_001601425.1_ASM160142v1	-	NY12
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.66005	50.5	-	CXER01	400	5030	4451	7/16/15	2/24/17	Scaffold	SC	SAMEA954545	GCA_001255955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/955/GCA_001255955.1_5417_2_9	-	20011685_1361400
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.10055	68.2	-	CSRL01	65	7333	6787	3/23/15	3/26/17	Scaffold	SC	SAMEA807001	GCA_001193615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/615/GCA_001193615.1_7907_5_11	-	C11
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	3.99749	47.6	-	JSTD01	121	3834	3597	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104881	GCA_000788495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/495/GCA_000788495.1_ASM78849v1	25538191	2012Env-2
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.28282	29.1	-	FADE01	1861	3881	3616	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664166	GCA_900010915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/915/GCA_900010915.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.12545	45.2	-	MIRW01	102	4825	4652	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN03358822	GCA_001726965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/965/GCA_001726965.1_ASM172696v1	-	GCSL_R98
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.5902	57.2	-	LFBD01	3	5635	5310	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280417	GCA_001034085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/085/GCA_001034085.1_Kleb_pneu_BIDMC91_V1	-	BIDMC91
Enterococcus faecalis	1351	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.76122	37.7	-	NGMV01	2	2716	2582	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634023	GCA_002141415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/415/GCA_002141415.1_ASM214141v1	-	8C4_DIV03288
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.97716	37.7	-	JULP01	280	3070	2880	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198189	GCA_001059995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/995/GCA_001059995.1_ASM105999v1	26230489	969_EFCM
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.80609	67.9	-	CGAG01	394	3702	3260	3/15/15	3/26/17	Scaffold	SC	SAMEA751181	GCA_001331875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/875/GCA_001331875.1_5601_5_8	-	B313
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.56399	31.8	-	FBNM01	18	1578	1515	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683453	GCA_001494895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/895/GCA_001494895.1_H092260569b	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.98442	54.7	-	FKHB01	63	4898	4636	4/6/16	3/28/17	Scaffold	SC	SAMEA2273250	GCA_900077885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/885/GCA_900077885.1_12082_4_45	-	e841
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.04591	64.2	-	FVWH01	37	5046	4899	3/10/17	3/18/17	Contig	SC	SAMEA2068682	GCA_900140355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/355/GCA_900140355.1_10665_4_12	-	267
Pseudomonas sp. PGPPP3	2015555	PRJNA340070	340070	Proteobacteria	Gammaproteobacteria	3.69873	61	-	NKIE01	914	4110	3791	8/16/17	8/16/17	Scaffold	CNRS-AMU	SAMN07280689	GCA_002256055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/256/055/GCA_002256055.1_ASM225605v1	-	-
Pseudomonas sp. 34-62-33	1970429	PRJNA379596	379596	Proteobacteria	Gammaproteobacteria	3.14833	61.9	-	NCJV01	425	3293	2940	8/16/17	8/16/17	Scaffold	None	SAMN06622207	GCA_002282595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/282/595/GCA_002282595.1_ASM228259v1	-	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.90669	64.1	-	FVWF01	6	4912	4798	3/10/17	3/18/17	Contig	SC	SAMEA2068676	GCA_900140365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/365/GCA_900140365.1_10665_3_73	-	243
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.58966	55.6	-	FKHD01	34	4441	4240	4/6/16	3/28/17	Scaffold	SC	SAMEA2273128	GCA_900077895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/895/GCA_900077895.1_12045_4_7	-	e85
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.67162	31.4	-	FBOY01	55	1730	1623	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683455	GCA_001494915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/915/GCA_001494915.1_H053280346	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.80716	67.9	-	CGHU01	416	3726	3277	3/15/15	3/26/17	Scaffold	SC	SAMEA751182	GCA_001331895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/895/GCA_001331895.1_5601_5_9	-	B320
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.9054	37.7	-	JUKJ01	347	2947	2798	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03198221	GCA_001060065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/065/GCA_001060065.1_ASM106006v1	26230489	999_EFCM
Enterococcus faecalis	1351	PRJEB18432	356030	Terrabacteria group	Firmicutes	3.34158	37.4	-	FREL01	833	3303	3143	12/8/16	3/28/17	Scaffold	RCPCM	SAMEA18418168	GCA_900143305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/305/GCA_900143305.1_Hp_74-d1_05	-	-
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.6812	57.5	-	LFBE01	5	5678	5362	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280418	GCA_001034125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/125/GCA_001034125.1_Kleb_pneu_BIDMC95_V1	-	BIDMC95
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.15616	45.2	-	MIRY01	93	4868	4692	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN03358823	GCA_001726975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/975/GCA_001726975.1_ASM172697v1	-	GCSL_R108
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.09866	28.6	-	FAGF01	376	3755	3632	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664249	GCA_900010935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/935/GCA_900010935.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	3.9659	47.6	-	JSTE01	142	3756	3539	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104882	GCA_000788515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/515/GCA_000788515.1_ASM78851v1	25538191	2012Env-25
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08965	68.2	-	CSLU01	64	7301	6786	3/22/15	3/26/17	Scaffold	SC	SAMEA807044	GCA_001193655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/655/GCA_001193655.1_7909_4_21	-	C54
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.98343	50.5	-	CWXY01	475	5818	4792	7/16/15	2/24/17	Scaffold	SC	SAMEA2434375	GCA_001255995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/995/GCA_001255995.1_12850_1_48	-	20132055
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.58989	38.3	-	LOLR01	98	3323	3123	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329974	GCA_001601455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/455/GCA_001601455.1_ASM160145v1	-	NY15
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.02003	41.2	-	FILQ01	27	2020	1924	2/10/16	3/19/17	Contig	SC	SAMEA1316561	GCA_900056555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/555/GCA_900056555.1_7054_7_66	-	SS983
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	1.99503	35.3	-	CDEI01	82	2024	1918	11/5/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780181	GCA_001399295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/295/GCA_001399295.1_Mother17	-	Mother17
Acinetobacter baumannii 24812_10	1310854	PRJNA194931	194931	Proteobacteria	Gammaproteobacteria	3.96249	39.2	-	JFDJ01	203	3919	3580	2/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02567744	GCA_000583475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/475/GCA_000583475.1_ASM58347v1	-	24812_10
Pseudomonas aeruginosa	287	PRJNA294638	294638	Proteobacteria	Gammaproteobacteria	6.80918	66.1	-	LJZJ01	164	6640	6386	11/17/15	3/18/17	Scaffold	Technical University of Denmark	SAMN04028052	GCA_001444895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/895/GCA_001444895.1_ASM144489v1	-	ATCC 33363
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16322	51.5	-	FEQA01	79	2525	2164	2/9/16	3/21/17	Scaffold	SC	SAMEA2674429	GCA_900025455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/455/GCA_900025455.1_14324_5_92	-	2842STDY5881625
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.62304	39.1	-	MUOI01	252	1639	1452	3/3/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187423	GCA_002012485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/485/GCA_002012485.1_ASM201248v1	28293542	CA22335
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06221	39.6	-	CNUL02	174	2228	1994	3/23/15	3/11/17	Contig	SC	SAMEA1032463	GCA_001098565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/565/GCA_001098565.2_6999_6_13	-	284968
Escherichia coli PA39	1005507	PRJNA65883	65883	Proteobacteria	Gammaproteobacteria	5.36494	50.5	-	AKLP01	794	5833	5320	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435919	GCA_000267685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/685/GCA_000267685.2_ASM26768v2	-	PA39
Mycobacterium tuberculosis XTB13-203	1427280	PRJNA229677	229677	Terrabacteria group	Actinobacteria	4.4242	65.6	-	JLIR01	2	4301	4100	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419636	GCA_000655455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/455/GCA_000655455.1_Myco_tube_XTB13-203_V1	-	XTB13-203
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.82946	37.5	-	CWMO01	439	3013	2722	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466600	GCA_001488435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/435/GCA_001488435.1_2014_60519A	-	-
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.63551	30.4	-	CZIS01	88	1728	1505	10/11/15	4/10/17	Contig	LSHTM	SAMEA3556546	GCA_001406895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/895/GCA_001406895.1_43_S41	-	Campylobacter jejuni
Salmonella enterica	28901	PRJNA327739	327739	Proteobacteria	Gammaproteobacteria	4.72449	52.2	-	MASZ01	53	4799	4548	7/22/16	3/1/17	Scaffold	Health Canada	SAMN05356916	GCA_001691895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/895/GCA_001691895.1_ASM169189v1	-	E3
Staphylococcus aureus M0702	1388508	PRJNA216681	216681	Terrabacteria group	Firmicutes	2.88079	32.9	-	JBAV01	12	3020	2861	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02325632	GCA_000529315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/315/GCA_000529315.1_Stap_aure_M0702_V1	-	M0702
Staphylococcus aureus M0714	1388509	PRJNA216682	216682	Terrabacteria group	Firmicutes	2.93612	33.1	-	JBAU01	19	3065	2890	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02325633	GCA_000529375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/375/GCA_000529375.1_Stap_aure_M0714_V1	-	M0714
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA327743	327743	Proteobacteria	Gammaproteobacteria	4.75216	52.1	-	MATI01	30	4821	4593	7/22/16	3/3/17	Scaffold	Health Canada	SAMN05356927	GCA_001691965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/965/GCA_001691965.1_ASM169196v1	-	STh02
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.66967	30.5	-	CZHI01	165	1833	1612	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556531	GCA_001406935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/935/GCA_001406935.1_27_S26	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.06788	37.9	-	CWKP01	115	3137	3018	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466554	GCA_001488995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/995/GCA_001488995.1_2011_171339_17	-	-
Mycobacterium tuberculosis XTB13-204	1427281	PRJNA229678	229678	Terrabacteria group	Actinobacteria	4.40042	65.5	-	JLIQ01	13	4282	4090	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419637	GCA_000655475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/475/GCA_000655475.1_Myco_tube_XTB13-204_V1	-	XTB13-204
Escherichia coli PA33	1005504	PRJNA65877	65877	Proteobacteria	Gammaproteobacteria	5.34794	50.4	-	AKLO01	548	5801	5329	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435990	GCA_000267705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/705/GCA_000267705.2_ASM26770v2	-	PA33
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.05459	39.5	-	CLAA01	65	2263	2030	3/21/15	3/11/17	Contig	SC	SAMEA1025979	GCA_001098605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/605/GCA_001098605.1_6840_3_22	-	SMRU1822
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.71051	38.9	-	MIKR01	145	1713	1508	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569559	GCA_002026445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/445/GCA_002026445.1_MM2003-103_v1.0	28293542	MM2003-103
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16563	51.5	-	FEQL01	100	2522	2158	2/9/16	3/21/17	Scaffold	SC	SAMEA2674551	GCA_900025465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/465/GCA_900025465.1_14355_7_85	-	2842STDY5881714
Pseudomonas aeruginosa	287	PRJNA294638	294638	Proteobacteria	Gammaproteobacteria	6.52217	66.1	-	LJZG01	318	6358	5963	11/17/15	3/18/17	Scaffold	Technical University of Denmark	SAMN04028049	GCA_001444995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/995/GCA_001444995.1_ASM144499v1	-	ATCC 33360
Acinetobacter baumannii 24812_4	1310848	PRJNA194925	194925	Proteobacteria	Gammaproteobacteria	4.11875	39.2	-	JFDI01	193	4114	3837	2/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02567745	GCA_000583495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/495/GCA_000583495.1_ASM58349v1	-	24812_4
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	1.99067	35.2	-	CDDS01	88	2017	1910	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780182	GCA_001399315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/315/GCA_001399315.1_Child17	-	Child17
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04726	41.2	-	FIPA01	26	2049	1956	2/10/16	3/19/17	Contig	SC	SAMEA1566101	GCA_900056575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/575/GCA_900056575.1_8337_6_74	-	EN506
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.63597	38.2	-	LOLN01	220	3364	3144	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329970	GCA_001601475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/475/GCA_001601475.1_ASM160147v1	-	NY11
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.74418	50.6	-	CWUH01	440	5493	4484	7/16/15	2/24/17	Scaffold	SC	SAMEA3345016	GCA_001256035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/035/GCA_001256035.1_H14138024701	-	24701ss_1
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08986	68.2	-	CSNO01	72	7313	6797	3/22/15	3/26/17	Scaffold	SC	SAMEA807013	GCA_001194765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/765/GCA_001194765.1_7909_4_19	-	C52
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.01731	47.5	-	JSSW01	93	3803	3624	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104852	GCA_000788535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/535/GCA_000788535.1_ASM78853v1	25538191	2010AA-145
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.23318	28.7	-	FAML01	1178	3938	3758	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664408	GCA_900010965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/965/GCA_900010965.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.12056	45.2	-	MIRX01	96	4815	4648	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368261	GCA_001726985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/985/GCA_001726985.1_ASM172698v1	-	GCSL_R99
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.64316	57.1	-	LFBF01	5	5677	5394	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280419	GCA_001034135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/135/GCA_001034135.1_Kleb_pneu_BIDMC96_V1	-	BIDMC96
Enterococcus faecalis	1351	PRJEB18432	356030	Terrabacteria group	Firmicutes	3.11486	37.3	-	FRDZ01	215	3182	3018	12/8/16	3/28/17	Scaffold	RCPCM	SAMEA18419668	GCA_900143365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/365/GCA_900143365.1_Hp_74-d5_05	-	-
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.98128	37.7	-	JVWZ01	438	3053	2900	7/10/15	3/26/17	Scaffold	University of Washington	SAMN03197217	GCA_001076335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/335/GCA_001076335.1_ASM107633v1	26230489	1250_EFCM
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.73961	67.7	-	CHKT01	995	3788	3054	4/21/15	3/26/17	Scaffold	SC	SAMEA751184	GCA_001331915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/915/GCA_001331915.1_5633_2_1	-	B006
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.6596	31.4	-	FBBZ01	24	1714	1625	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683116	GCA_001494935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/935/GCA_001494935.1_EC5531	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.22825	54.6	-	FKHE01	70	5186	4897	4/6/16	3/28/17	Scaffold	SC	SAMEA2273253	GCA_900077905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/905/GCA_900077905.1_11983_7_27	-	e854
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18035	64.2	-	FSOO01	34	5192	5042	12/14/16	3/21/17	Contig	SC	SAMEA2070548	GCA_900140375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/375/GCA_900140375.1_10665_3_78	-	248
Pseudomonas sp. UBA800	1947344	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	5.63308	61.9	-	DBIO01	334	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06451075	GCA_002296625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/296/625/GCA_002296625.1_ASM229662v1	28894102	-
Pseudomonas sp. UBA1289	1947303	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	5.22231	60.4	-	DBUN01	298	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06455757	GCA_002307935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/935/GCA_002307935.1_ASM230793v1	28894102	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.85572	64.2	-	FVWE01	5	4852	4736	3/10/17	3/18/17	Contig	SC	SAMEA2071357	GCA_900140385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/385/GCA_900140385.1_10665_4_4	-	259
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.32293	54.9	-	FKHC01	74	5282	5024	4/6/16	3/28/17	Scaffold	SC	SAMEA2273252	GCA_900077915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/915/GCA_900077915.1_11983_7_26	-	e843
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.63784	31.4	-	FAXU01	12	1690	1601	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683008	GCA_001494955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/955/GCA_001494955.1_p495B	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.78089	67.8	-	CFXO01	729	3787	3169	3/15/15	3/26/17	Scaffold	SC	SAMEA751185	GCA_001331955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/955/GCA_001331955.1_5601_1_3	-	B063
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	2.86623	38.1	-	LNDL01	116	2966	2797	1/29/16	3/27/17	Scaffold	Uppsala University	SAMN04266627	GCA_001542895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/895/GCA_001542895.1_ASM154289v1	-	87056200
Enterococcus faecalis	1351	PRJEB18432	356030	Terrabacteria group	Firmicutes	3.19609	37.4	-	FREB01	224	3295	3028	12/8/16	3/28/17	Scaffold	RCPCM	SAMEA18421918	GCA_900143415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/415/GCA_900143415.1_Hp_76-17_05	-	-
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.37469	57.4	-	LFBG01	7	5314	5059	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280421	GCA_001034155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/155/GCA_001034155.1_Kleb_pneu_UCI70_V1	-	UCI70
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.1243	45.2	-	MIRZ01	93	4840	4651	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368263	GCA_001727025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/025/GCA_001727025.1_ASM172702v1	-	GCSL_R109
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.38232	28.8	-	FAOA01	344	4085	3948	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664449	GCA_900010995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/995/GCA_900010995.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA263670	263670	Proteobacteria	Gammaproteobacteria	4.02811	47.5	-	JSSX01	120	3812	3632	12/3/14	3/25/17	Scaffold	University of Florida	SAMN03104853	GCA_000788555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/555/GCA_000788555.1_ASM78855v1	25538191	2010AA-146
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.01579	68.3	-	CSKG01	60	7229	6740	3/23/15	3/26/17	Scaffold	SC	SAMEA949291	GCA_001194905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/905/GCA_001194905.1_7910_7_28	-	D1 9033-5008
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.62617	50.7	-	CXNI01	416	5205	4421	7/16/15	2/24/17	Scaffold	SC	SAMEA2058002	GCA_001256055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/055/GCA_001256055.1_9870_6_63	-	144353
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.51493	38.2	-	LOLM01	253	3225	3018	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329969	GCA_001601485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/485/GCA_001601485.1_ASM160148v1	-	NY10
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05339	41.1	-	FIPR01	23	2068	1963	2/10/16	3/19/17	Contig	SC	SAMEA1566199	GCA_900056585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/585/GCA_900056585.1_8525_5_30	-	SS25
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.03077	35.2	-	CDCW01	78	2064	1972	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780183	GCA_001399335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/335/GCA_001399335.1_Mother18	-	Mother18
Acinetobacter baumannii 24812_6	1310850	PRJNA194927	194927	Proteobacteria	Gammaproteobacteria	4.08104	39.1	-	JFDH01	214	4064	3800	2/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02567746	GCA_000583515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/515/GCA_000583515.1_ASM58351v1	-	24812_6
Pseudomonas aeruginosa	287	PRJNA294638	294638	Proteobacteria	Gammaproteobacteria	6.53296	66.1	-	LJZN01	206	6342	6058	11/17/15	3/18/17	Scaffold	Technical University of Denmark	SAMN04028056	GCA_001445035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/035/GCA_001445035.1_ASM144503v1	-	ATCC 43732
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.1513	51.6	-	FEQJ01	78	2492	2143	2/9/16	3/21/17	Scaffold	SC	SAMEA2674529	GCA_900025475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/475/GCA_900025475.1_14355_7_63	-	2842STDY5881692
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.66868	39	-	MIKZ01	96	1647	1477	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569567	GCA_002026455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/455/GCA_002026455.1_MCms931_v1.0	28293542	MCms931
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.00226	39.8	-	CKPO01	68	2180	1976	3/21/15	3/11/17	Contig	SC	SAMEA1024537	GCA_001098705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/705/GCA_001098705.1_6680_5_13	-	SMRU925
Escherichia coli PA32	1005503	PRJNA65875	65875	Proteobacteria	Gammaproteobacteria	5.36308	50.3	-	AKLN01	556	5806	5357	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435951	GCA_000267725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/725/GCA_000267725.2_ASM26772v2	-	PA32
Mycobacterium tuberculosis XTB13-205	1427282	PRJNA229679	229679	Terrabacteria group	Actinobacteria	4.41894	65.6	-	JLIP01	3	4305	4109	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419638	GCA_000655495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/495/GCA_000655495.1_Myco_tube_XTB13-205_V1	-	XTB13-205
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.97685	37.9	-	CWMH01	50	3060	2943	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466590	GCA_001489075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/075/GCA_001489075.1_2012_318878_7	-	-
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.6212	30.5	-	CZJN01	65	1701	1556	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556567	GCA_001406955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/955/GCA_001406955.1_65_S63	-	Campylobacter jejuni
Salmonella enterica subsp. enterica serovar Montevideo	115981	PRJNA327743	327743	Proteobacteria	Gammaproteobacteria	4.67023	52.2	-	MATD01	30	4743	4487	7/22/16	3/1/17	Scaffold	Health Canada	SAMN05356922	GCA_001691975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/975/GCA_001691975.1_ASM169197v1	-	SMo01
Staphylococcus aureus M0726	1388510	PRJNA216683	216683	Terrabacteria group	Firmicutes	2.89283	33	-	JBAT01	12	3020	2859	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325634	GCA_000529415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/415/GCA_000529415.1_Stap_aure_M0726_V1	-	M0726
Staphylococcus aureus M0735	1388511	PRJNA216684	216684	Terrabacteria group	Firmicutes	2.89774	32.9	-	JBAS01	12	3027	2858	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325635	GCA_000529455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/455/GCA_000529455.1_Stap_aure_M0735_V1	-	M0735
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA327743	327743	Proteobacteria	Gammaproteobacteria	4.73368	52	-	MATG01	36	4826	4557	7/22/16	3/1/17	Scaffold	Health Canada	SAMN05356925	GCA_001692005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/005/GCA_001692005.1_ASM169200v1	-	SMu02
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.65913	30.7	-	CZIY01	310	1800	1625	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556541	GCA_001406975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/975/GCA_001406975.1_38_S48	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.0675	37.8	-	CWLE01	131	3204	3042	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466569	GCA_001489195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/195/GCA_001489195.1_2012_286536_17	-	-
Mycobacterium tuberculosis XTB13-206	1427283	PRJNA229680	229680	Terrabacteria group	Actinobacteria	4.42935	65.6	-	JLIO01	5	4294	4102	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419639	GCA_000655515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/515/GCA_000655515.1_Myco_tube_XTB13-206_V1	-	XTB13-206
Escherichia coli PA31	1005502	PRJNA65873	65873	Proteobacteria	Gammaproteobacteria	5.36941	50.4	-	AKLM01	543	5805	5331	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435918	GCA_000267745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/745/GCA_000267745.2_ASM26774v2	-	PA31
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07843	39.6	-	CNWI02	136	2280	2073	3/22/15	3/5/17	Contig	SC	SAMEA1032444	GCA_001098785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/785/GCA_001098785.2_7001_1_5	-	R34-3082
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.68589	38.9	-	MILC01	107	1660	1482	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569570	GCA_002026485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/485/GCA_002026485.1_MG2005-100_v1.0	28293542	MG2005-100
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16423	51.5	-	FESB01	91	2514	2156	2/9/16	3/21/17	Scaffold	SC	SAMEA2674047	GCA_900025485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/485/GCA_900025485.1_14355_4_93	-	2842STDY5881050
Pseudomonas aeruginosa PAb1	509633	PRJNA28809	28809	Proteobacteria	Gammaproteobacteria	6.0786	66.8	-	ABKZ01	658	5949	5538	9/15/09	5/19/17	Contig	The University of Maryland Center For Bioinformatics & Computational Biology	SAMN00000299	GCA_000172395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/395/GCA_000172395.1_ASM17239v1	18818729	PAb1
Acinetobacter baumannii 24860_10	1310844	PRJNA194920	194920	Proteobacteria	Gammaproteobacteria	4.22919	39.1	-	JFDG01	263	4278	3937	2/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02567747	GCA_000583535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/535/GCA_000583535.1_ASM58353v1	-	24860_10
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.02766	35.2	-	CDCV01	56	2056	1970	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780184	GCA_001399355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/355/GCA_001399355.1_Child18	-	Child18
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.08914	41.2	-	FIQU01	21	2117	2004	2/10/16	3/19/17	Contig	SC	SAMEA1566083	GCA_900056595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/595/GCA_900056595.1_8525_5_59	-	SS84
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.37334	38.2	-	LOLJ01	195	3083	2892	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329966	GCA_001601505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/505/GCA_001601505.1_ASM160150v1	-	NY7
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.91655	50.5	-	CWZN01	440	5520	4732	7/16/15	2/24/17	Scaffold	SC	SAMEA2445744	GCA_001256075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/075/GCA_001256075.1_12971_8_53	-	H140640168
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.20573	68.1	-	CSLP01	70	7376	6862	3/22/15	3/26/17	Scaffold	SC	SAMEA949409	GCA_001195065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/065/GCA_001195065.1_7910_7_31	-	E25
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.01249	47.6	-	CWOC01	68	3793	3588	7/16/15	3/26/17	Scaffold	SC	SAMEA889269	GCA_001247245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/245/GCA_001247245.1_2956_6_4	-	4679
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.31439	28.4	-	CZZP01	516	4003	3858	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664074	GCA_900011075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/075/GCA_900011075.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.07846	45.2	-	MISC01	150	4805	4580	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368265	GCA_001727045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/045/GCA_001727045.1_ASM172704v1	-	GCSL_R125
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.71942	57.1	-	LFBH01	14	5862	5580	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280422	GCA_001034165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/165/GCA_001034165.1_Kleb_pneu_UCI75_V1	-	UCI75
Enterococcus faecalis	1351	PRJEB18536	356851	Terrabacteria group	Firmicutes	3.34158	37.4	-	FRYC01	833	3303	3143	12/9/16	3/28/17	Scaffold	Moscow	SAMEA23870668	GCA_900148535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/535/GCA_900148535.1_Hp_74-d1_05	-	-
Enterococcus faecium	1352	PRJNA306168	306168	Terrabacteria group	Firmicutes	3.17066	38	-	LRAS01	262	3372	3086	2/1/16	3/27/17	Scaffold	brown University/Rhode Island Hospital	SAMN04390119	GCA_001543555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/555/GCA_001543555.1_ASM154355v1	-	D344RRF x C68
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.77938	67.8	-	CFZS01	719	3778	3166	3/15/15	3/27/17	Scaffold	SC	SAMEA751189	GCA_001331975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/975/GCA_001331975.1_5601_1_2	-	B078
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.77631	31.2	-	FBEP01	42	1871	1769	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683183	GCA_001494995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/995/GCA_001494995.1_SS_2238	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.78653	54.5	-	FKHG01	23	4656	4453	4/6/16	3/28/17	Scaffold	SC	SAMEA2273255	GCA_900077925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/925/GCA_900077925.1_11983_7_29	-	e864
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.3733	64.1	-	FSOP01	32	5462	5273	12/14/16	3/21/17	Contig	SC	SAMEA2068795	GCA_900140395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/395/GCA_900140395.1_10665_4_24	-	279
Pseudomonas sp. UBA1534	1947304	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.77274	61.6	-	DCPW01	364	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454589	GCA_002323275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/323/275/GCA_002323275.1_ASM232327v1	28894102	-
Pseudomonas sp. UBA2047	1947306	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.60709	62.7	-	DDAX01	211	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456970	GCA_002333285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/333/285/GCA_002333285.1_ASM233328v1	28894102	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.0474	64.2	-	FVWM01	32	5040	4898	3/10/17	3/18/17	Contig	SC	SAMEA2070672	GCA_900140405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/405/GCA_900140405.1_10665_4_83	-	338
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.20437	54.5	-	FKHH01	59	5259	4989	4/6/16	3/28/17	Scaffold	SC	SAMEA2273256	GCA_900077935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/935/GCA_900077935.1_11983_7_30	-	e871
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.77471	31.3	-	FBEF01	55	1857	1762	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683167	GCA_001495015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/015/GCA_001495015.1_SS_2226	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.79395	67.8	-	CFWS01	566	3752	3216	3/15/15	3/26/17	Scaffold	SC	SAMEA751196	GCA_001331995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/995/GCA_001331995.1_5601_1_5	-	B057
Enterococcus faecium	1352	PRJNA306168	306168	Terrabacteria group	Firmicutes	3.01618	38.1	-	LRAV01	211	3192	2948	2/1/16	3/27/17	Scaffold	brown University/Rhode Island Hospital	SAMN04390141	GCA_001543565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/565/GCA_001543565.1_ASM154356v1	-	D344RRF x C68
Enterococcus faecalis	1351	PRJEB18536	356851	Terrabacteria group	Firmicutes	3.11486	37.3	-	FRXR01	215	3182	3018	12/9/16	3/28/17	Scaffold	Moscow	SAMEA23872168	GCA_900148545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/545/GCA_900148545.1_Hp_74-d5_05	-	-
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.5826	57.1	-	LFBI01	4	5596	5301	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280423	GCA_001034205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/205/GCA_001034205.1_Kleb_pneu_UCI76_V1	-	UCI76
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.1238	45.2	-	MISA01	96	4833	4652	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN03358824	GCA_001727055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/055/GCA_001727055.1_ASM172705v1	-	GCSL_R110
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.17971	29	-	FADD01	1215	3838	3639	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664165	GCA_900011095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/095/GCA_900011095.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.09524	47.5	-	CWSM01	46	3887	3749	7/16/15	3/26/17	Scaffold	SC	SAMEA889163	GCA_001247525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/525/GCA_001247525.1_5174_8_5	-	A346(1)
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.05325	68.2	-	CSKU01	72	7274	6780	3/23/15	3/26/17	Scaffold	SC	SAMEA949319	GCA_001195465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/465/GCA_001195465.1_7915_5_14	-	10./96
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.6742	50.8	-	CXJV01	394	5260	4486	7/16/15	2/24/17	Scaffold	SC	SAMEA2004856	GCA_001256095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/095/GCA_001256095.1_8290_4_2	-	92360
Legionella pneumophila	446	PRJNA305599	305599	Proteobacteria	Gammaproteobacteria	3.35862	38.2	-	LOLK01	110	3071	2891	3/28/16	3/28/17	Scaffold	Centers for Disease Control and Prevention	SAMN04329967	GCA_001601535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/535/GCA_001601535.1_ASM160153v1	-	NY8
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.0534	41.2	-	FISE01	22	2066	1949	2/10/16	3/19/17	Contig	SC	SAMEA1566075	GCA_900056605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/605/GCA_900056605.1_8525_5_93	-	01ZN-TG189
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.0163	35.2	-	CDCU01	93	2025	1920	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780185	GCA_001399375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/375/GCA_001399375.1_Mother19	-	Mother19
Acinetobacter baumannii 24860_2	1310836	PRJNA194912	194912	Proteobacteria	Gammaproteobacteria	4.14089	39.3	-	JFDF01	123	4081	3800	2/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02567748	GCA_000583555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/555/GCA_000583555.1_ASM58355v1	-	24860_2
Pseudomonas aeruginosa HB13	983918	PRJNA62723	62723	Proteobacteria	Gammaproteobacteria	6.52931	66.2	-	AEVV03	23	6341	6172	6/3/11	3/18/17	Contig	University of Minho	SAMN02471892	GCA_000215775.5	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/775/GCA_000215775.5_PA13_miseq	21705591	138244
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16153	51.5	-	FESD01	92	2515	2150	2/9/16	3/21/17	Scaffold	SC	SAMEA2674052	GCA_900025495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/495/GCA_900025495.1_14355_4_95	-	2842STDY5881052
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.65658	39.1	-	MIKU01	117	1648	1473	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569562	GCA_002026505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/505/GCA_002026505.1_MCms1054_v1.0	28293542	MCms1054
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.10481	39.6	-	CMHY01	56	2341	2114	3/22/15	3/11/17	Contig	SC	SAMEA1029404	GCA_001098805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/805/GCA_001098805.1_7038_6_16	-	SMRU2992
Escherichia coli PA28	1005501	PRJNA65869	65869	Proteobacteria	Gammaproteobacteria	5.40227	50.2	-	AKLL01	429	5864	5383	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435926	GCA_000267765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/765/GCA_000267765.2_ASM26776v2	-	PA28
Mycobacterium tuberculosis XTB13-208	1427285	PRJNA229682	229682	Terrabacteria group	Actinobacteria	4.43006	65.5	-	JLIN01	3	4305	4107	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419641	GCA_000655535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/535/GCA_000655535.1_Myco_tube_XTB13-208_V1	-	XTB13-208
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.01868	37.8	-	CWMD01	154	3123	2977	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466564	GCA_001489235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/235/GCA_001489235.1_2013_148278_15	-	-
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.73003	30.3	-	CZHV01	216	1851	1646	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556516	GCA_001406995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/995/GCA_001406995.1_13_S12	-	Campylobacter jejuni
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA327743	327743	Proteobacteria	Gammaproteobacteria	4.96592	52.1	-	MATJ01	63	5135	4870	7/22/16	3/1/17	Scaffold	Health Canada	SAMN05356928	GCA_001692065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/065/GCA_001692065.1_ASM169206v1	-	STy01
Staphylococcus aureus M0498	1388512	PRJNA216685	216685	Terrabacteria group	Firmicutes	2.83746	32.8	-	JBAR01	17	2978	2812	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325636	GCA_000529475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/475/GCA_000529475.1_Stap_aure_M0498_V1	-	M0498
Staphylococcus aureus M0511	1388513	PRJNA216686	216686	Terrabacteria group	Firmicutes	2.96323	32.9	-	JBAQ01	11	3131	2958	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02325637	GCA_000529515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/515/GCA_000529515.1_Stap_aure_M0511_V1	-	M0511
Salmonella enterica subsp. enterica	59201	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	5.09656	52.1	-	LXHA01	230	5248	4998	8/5/16	3/1/17	Scaffold	U.S. Food and Drug Administration	SAMN04925824	GCA_001700345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/345/GCA_001700345.1_ASM170034v1	-	SE696A
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.65771	30.5	-	CZJI01	73	1761	1630	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556564	GCA_001407015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/015/GCA_001407015.1_62_S60	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.00402	37.8	-	CWMS01	173	3127	2969	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466604	GCA_001489375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/375/GCA_001489375.1_2014_60573_2B	-	-
Mycobacterium tuberculosis XTB13-209	1427286	PRJNA229683	229683	Terrabacteria group	Actinobacteria	4.42184	65.5	-	JLIM01	6	4293	4118	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419642	GCA_000655555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/555/GCA_000655555.1_Myco_tube_XTB13-209_V1	-	XTB13-209
Escherichia coli PA25	1005500	PRJNA65867	65867	Proteobacteria	Gammaproteobacteria	5.36618	50.3	-	AKLK01	423	5829	5357	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435917	GCA_000267785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/785/GCA_000267785.2_ASM26778v2	-	PA25
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09459	39.7	-	CNVR02	197	2305	2078	3/23/15	3/11/17	Contig	SC	SAMEA1032526	GCA_001098925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/925/GCA_001098925.2_6999_7_4	-	341365
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.65082	39	-	MIKT01	180	1641	1441	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569561	GCA_002026515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/515/GCA_002026515.1_MC2011-145_v1.0	28293542	MC2011-145
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.10872	51.8	-	FEST01	67	2454	2122	2/9/16	3/21/17	Scaffold	SC	SAMEA2673876	GCA_900025505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/505/GCA_900025505.1_14355_5_34	-	2842STDY5881087
Pseudomonas aeruginosa HB15	983919	PRJNA62725	62725	Proteobacteria	Gammaproteobacteria	6.6377	66.2	-	AEVW03	19	6317	6145	6/3/11	3/18/17	Contig	University of Minho	SAMN02471890	GCA_000215795.5	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/795/GCA_000215795.5_PA15_miseq	21705591	HB15
Acinetobacter baumannii 24860_4	1310838	PRJNA194914	194914	Proteobacteria	Gammaproteobacteria	4.1062	39.1	-	JFDE01	155	4101	3834	2/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02567749	GCA_000583575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/575/GCA_000583575.1_ASM58357v1	-	24860_4
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.0196	35.2	-	CDBF01	80	2036	1933	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780186	GCA_001399395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/395/GCA_001399395.1_Child19-1	-	Child19-1
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.03727	41.2	-	FISD01	22	2046	1932	2/10/16	3/19/17	Contig	SC	SAMEA1566088	GCA_900056615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/615/GCA_900056615.1_8525_5_96	-	CTU02SS-DN026
Legionella pneumophila	446	PRJNA305895	305895	Proteobacteria	Gammaproteobacteria	3.47257	38.2	-	LORH01	39	3167	3000	4/30/16	3/28/17	Scaffold	"National Institute of Health, Portugal"	SAMN04335425	GCA_001639045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/045/GCA_001639045.1_ASM163904v1	27196677	PtVFX/2014
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.74449	50.7	-	CXJB01	379	5336	4579	7/16/15	2/24/17	Scaffold	SC	SAMEA2003387	GCA_001256115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/115/GCA_001256115.1_8289_7_87	-	87016
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.09354	68.2	-	CSMO01	72	7309	6779	3/23/15	3/26/17	Scaffold	SC	SAMEA807008	GCA_001196125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/125/GCA_001196125.1_7907_5_31	-	C31
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.06583	47.4	-	CWNK01	36	3867	3718	7/16/15	3/26/17	Scaffold	SC	SAMEA889332	GCA_001247835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/835/GCA_001247835.1_5174_7_1	-	1627
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.12424	28.5	-	FADC01	306	3761	3656	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664167	GCA_900011105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/105/GCA_900011105.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	4.92522	45.3	-	MISB01	95	4645	4460	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368264	GCA_001727065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/065/GCA_001727065.1_ASM172706v1	-	GCSL_R111
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.7915	57	-	LFBJ01	9	5923	5654	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280424	GCA_001034215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/215/GCA_001034215.1_Kleb_pneu_UCI81_V1	-	UCI81
Enterococcus faecalis	1351	PRJEB18536	356851	Terrabacteria group	Firmicutes	3.19609	37.4	-	FRXS01	224	3295	3028	12/9/16	3/28/17	Scaffold	Moscow	SAMEA23874418	GCA_900148695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/695/GCA_900148695.1_Hp_76-17_05	-	-
Enterococcus faecium	1352	PRJNA306168	306168	Terrabacteria group	Firmicutes	3.02448	38.1	-	LRAU01	201	3208	2950	2/1/16	3/27/17	Scaffold	brown University/Rhode Island Hospital	SAMN04390121	GCA_001543575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/575/GCA_001543575.1_ASM154357v1	-	D344RRF x C68
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.79724	67.8	-	CFZY01	589	3768	3230	3/15/15	3/26/17	Scaffold	SC	SAMEA751203	GCA_001332015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/015/GCA_001332015.1_5601_1_4	-	B056
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.58237	31.7	-	FBOI01	28	1591	1524	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683450	GCA_001495035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/035/GCA_001495035.1_H124620276a	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.17524	54.6	-	FKHJ01	61	5216	4942	4/6/16	3/28/17	Scaffold	SC	SAMEA2273258	GCA_900077945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/945/GCA_900077945.1_11983_7_33	-	e878
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.86218	64.2	-	FVWG01	14	4832	4704	3/10/17	3/18/17	Contig	SC	SAMEA2070669	GCA_900140415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/415/GCA_900140415.1_10665_4_74	-	329
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.05446	64.2	-	FSOR01	18	5063	4920	12/14/16	3/21/17	Contig	SC	SAMEA2068681	GCA_900140435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/435/GCA_900140435.1_10665_4_9	-	264
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.84508	55.5	-	FKHF01	44	4782	4551	4/6/16	3/28/17	Scaffold	SC	SAMEA2273254	GCA_900077955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/955/GCA_900077955.1_11983_7_28	-	e856
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68571	31.4	-	FAZF01	32	1743	1647	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683039	GCA_001495055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/055/GCA_001495055.1_H121240507	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.79384	67.8	-	CFZC01	561	3756	3217	3/15/15	3/27/17	Scaffold	SC	SAMEA751209	GCA_001332035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/035/GCA_001332035.1_5601_1_7	-	B052
Enterococcus faecium	1352	PRJNA306168	306168	Terrabacteria group	Firmicutes	3.00537	38.1	-	LRAT01	203	3174	2931	2/1/16	3/27/17	Scaffold	brown University/Rhode Island Hospital	SAMN04390120	GCA_001543585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/585/GCA_001543585.1_ASM154358v1	-	D344RRF x C68
Enterococcus faecalis	1351	PRJNA389368	389368	Terrabacteria group	Firmicutes	4.53915	61.8	chromosome:CP022312.1	-	1	-	-	7/6/17	7/6/17	Chromosome	Rehman Medical Institute	SAMN07196159	GCA_002215625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/215/625/GCA_002215625.1_ASM221562v1	-	V583
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.50476	57.2	-	LFBK01	4	5503	5244	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280425	GCA_001034235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/235/GCA_001034235.1_Kleb_pneu_UCI82_V1	-	UCI82
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.13845	45.3	-	MISD01	115	4875	4725	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368266	GCA_001727105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/105/GCA_001727105.1_ASM172710v1	-	GCSL_R126
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.2764	29.2	-	FAFG01	1277	3931	3667	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664221	GCA_900011115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/115/GCA_900011115.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.01588	47.5	-	CWQN01	70	3786	3423	7/16/15	3/26/17	Scaffold	SC	SAMEA889175	GCA_001247885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/885/GCA_001247885.1_4075_3_12	-	IDHO1_726
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08613	68.2	-	CSMS01	62	7305	6798	3/22/15	3/26/17	Scaffold	SC	SAMEA807007	GCA_001196775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/775/GCA_001196775.1_7909_4_17	-	C50
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.72019	50.7	-	CXNH01	408	5299	4546	7/16/15	2/24/17	Scaffold	SC	SAMEA2057231	GCA_001256135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/135/GCA_001256135.1_9870_6_62	-	144303
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.41203	38.3	-	FJFB01	24	3121	3013	2/20/16	3/27/17	Scaffold	SC	SAMEA2058475	GCA_900050985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/985/GCA_900050985.1_10060_4_82	-	2531STDY5467363
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.16256	41	-	FIFG01	71	2216	2063	2/10/16	3/19/17	Contig	SC	SAMEA1316658	GCA_900056825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/825/GCA_900056825.1_5749_1_6	-	LOLA-SS006
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.01981	35.2	-	CDBE01	80	2033	1928	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780187	GCA_001399415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/415/GCA_001399415.1_Child19-2	-	Child19-2
Acinetobacter baumannii 24860_7	1310841	PRJNA194917	194917	Proteobacteria	Gammaproteobacteria	4.04149	39.1	-	JFDD01	220	4020	3744	2/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02567750	GCA_000583595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/595/GCA_000583595.1_ASM58359v1	-	24860_7
Pseudomonas aeruginosa AES-1R	1000561	PRJNA64619	64619	Proteobacteria	Gammaproteobacteria	6.26762	66.5	-	AFNF01	1783	-	-	7/6/11	9/18/17	Contig	"Bacterial Pathogens in CF group, Sydney Medical School, The University of Sydney Sydney Australia 2006"	SAMN02471202	GCA_000220025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/025/GCA_000220025.2_ASM22002v2	21935417	AES-1R
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.17388	51.5	-	FESV01	97	2540	2171	2/9/16	3/21/17	Scaffold	SC	SAMEA2673892	GCA_900025515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/515/GCA_900025515.1_14355_5_39	-	2842STDY5881092
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.71566	38.8	-	MILB01	85	1715	1530	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569569	GCA_002026545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/545/GCA_002026545.1_MG2003-98_v1.0	28293542	MG2003-98
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.08327	39.6	-	CKHG01	55	2284	2053	3/21/15	3/4/17	Contig	SC	SAMEA1023962	GCA_001099105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/105/GCA_001099105.1_6631_2_19	-	14
Escherichia coli PA24	1005499	PRJNA65863	65863	Proteobacteria	Gammaproteobacteria	5.31587	50.4	-	AKLJ01	465	5727	5265	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435950	GCA_000267805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/805/GCA_000267805.2_ASM26780v2	-	PA24
Mycobacterium tuberculosis XTB13-210	1427287	PRJNA229685	229685	Terrabacteria group	Actinobacteria	4.42988	65.5	-	JLIL01	3	4304	4104	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419643	GCA_000655575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/575/GCA_000655575.1_Myco_tube_XTB13-210_V1	-	XTB13-210
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.9972	38	-	CWLR01	52	3043	2921	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466579	GCA_001489795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/795/GCA_001489795.1_2012_313587_11	-	-
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.65442	30.4	-	CZHT01	186	1783	1603	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556508	GCA_001407035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/035/GCA_001407035.1_4_S4	-	Campylobacter jejuni
Salmonella enterica subsp. enterica	59201	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	5.10023	52.1	-	LXGZ01	318	5278	5007	8/5/16	3/1/17	Scaffold	U.S. Food and Drug Administration	SAMN04925901	GCA_001700365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/365/GCA_001700365.1_ASM170036v1	-	SE710A
Staphylococcus aureus M0524	1388514	PRJNA216687	216687	Terrabacteria group	Firmicutes	2.9463	32.8	-	JBAP01	18	3120	2974	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325638	GCA_000529575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/575/GCA_000529575.1_Stap_aure_M0524_V1	-	M0524
Staphylococcus aureus M0538	1388515	PRJNA216688	216688	Terrabacteria group	Firmicutes	2.91339	32.9	-	JBAO01	21	3068	2891	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325639	GCA_000529635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/635/GCA_000529635.1_Stap_aure_M0538_V1	-	M0538
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	5.13403	52.2	-	LYRS01	524	5231	4950	9/15/16	3/1/17	Scaffold	U.S. Food and Drug Administration	SAMN05172535	GCA_001729035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/035/GCA_001729035.1_ASM172903v1	-	ST452
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.57836	30.6	-	CZIM01	201	1674	1528	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556517	GCA_001407055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/055/GCA_001407055.1_14_S13	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.98732	37.8	-	CWKV01	52	3045	2929	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466547	GCA_001489875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/875/GCA_001489875.1_2012_156554_14	-	-
Mycobacterium tuberculosis XTB13-211	1427288	PRJNA229686	229686	Terrabacteria group	Actinobacteria	4.39376	65.6	-	JLIK01	2	4258	4101	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419644	GCA_000655595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/595/GCA_000655595.1_Myco_tube_XTB13-211_V1	-	XTB13-211
Escherichia coli PA15	1005496	PRJNA65857	65857	Proteobacteria	Gammaproteobacteria	5.4396	50.3	-	AKLH01	492	5892	5429	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435916	GCA_000267825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/825/GCA_000267825.2_ASM26782v2	-	PA15
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.06693	39.6	-	CMAB01	50	2277	2031	3/21/15	3/15/17	Contig	SC	SAMEA1028651	GCA_001099165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/165/GCA_001099165.1_7004_5_23	-	SMRU2879
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.74421	38.9	-	MILF01	94	1741	1557	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569573	GCA_002026555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/555/GCA_002026555.1_MG2006-407_v1.0	28293542	MG2006-407
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.18904	51.5	-	FETX01	101	2535	2178	2/9/16	3/21/17	Scaffold	SC	SAMEA2673786	GCA_900025525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/525/GCA_900025525.1_14355_6_7	-	2842STDY5881156
Pseudomonas aeruginosa 9BR	1051005	PRJNA68315	68315	Proteobacteria	Gammaproteobacteria	6.84986	66.1	-	AFXI01	2	6580	6401	8/17/11	5/19/17	Contig	"IBIS, Universite Laval"	SAMN02471403	GCA_000223925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/223/925/GCA_000223925.2_ASM22392v2	22207740	9BR
Acinetobacter baumannii 1287985	1310746	PRJNA194822	194822	Proteobacteria	Gammaproteobacteria	3.99889	39.1	-	JFFG01	113	3985	3695	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404492	GCA_000584035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/035/GCA_000584035.1_ASM58403v1	-	1287985
Streptococcus agalactiae	1311	PRJEB6691	260588	Terrabacteria group	Firmicutes	2.01939	35.2	-	CDBD01	82	2036	1931	11/4/14	3/18/17	Contig	INSTITUT PASTEUR	SAMEA2780188	GCA_001399435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/435/GCA_001399435.1_Child19-3	-	Child19-3
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.18354	40.9	-	FIJQ01	29	2195	2041	2/10/16	3/19/17	Contig	SC	SAMEA1316515	GCA_900056845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/845/GCA_900056845.1_7054_7_26	-	SS1016
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.53878	38.3	-	FJJB01	60	3235	3088	2/20/16	3/27/17	Scaffold	SC	SAMEA2077782	GCA_900051745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/745/GCA_900051745.1_10625_2_81	-	2532STDY5467554
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.74421	50.6	-	CWTM01	406	5554	4447	7/17/15	2/24/17	Scaffold	SC	SAMEA3345058	GCA_001256155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/155/GCA_001256155.1_H14118090301	-	90301ss_1
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08828	68.2	-	CSMH01	62	7304	6781	3/23/15	3/26/17	Scaffold	SC	SAMEA807033	GCA_001197015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/015/GCA_001197015.1_7907_5_17	-	C17
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.9977	47.6	-	CWOY01	120	3817	3477	7/17/15	3/26/17	Scaffold	SC	SAMEA889385	GCA_001248195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/195/GCA_001248195.1_4056_5_4	-	A60
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.42111	28.5	-	FAHG01	1208	4091	3852	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664272	GCA_900011145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/145/GCA_900011145.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	4.89738	45.4	-	MISE01	114	4583	4422	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368267	GCA_001727115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/115/GCA_001727115.1_ASM172711v1	-	GCSL_R129
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.95558	56.9	-	LFBL01	7	6076	5786	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280426	GCA_001034245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/245/GCA_001034245.1_Kleb_pneu_UCI91_V1	-	UCI91
Enterococcus faecalis TX1467	749517	PRJNA47189	47189	Terrabacteria group	Firmicutes	3.02628	37.1	-	AFBS01	126	3557	3510	4/19/11	8/20/13	Scaffold	Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine	SAMN02299432	GCA_000205205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/205/205/GCA_000205205.1_ASM20520v1	-	TX1467
Enterococcus faecium	1352	PRJNA306168	306168	Terrabacteria group	Firmicutes	2.99275	38.1	-	LRAW01	203	3171	2925	2/1/16	3/27/17	Scaffold	brown University/Rhode Island Hospital	SAMN04414039	GCA_001543635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/635/GCA_001543635.1_ASM154363v1	-	D344RRF x C68
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.78681	67.8	-	CFZX01	522	3739	3242	3/15/15	3/27/17	Scaffold	SC	SAMEA751214	GCA_001332055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/055/GCA_001332055.1_5601_1_6	-	B055
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.74125	31.1	-	FBDQ01	31	1838	1690	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683157	GCA_001495095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/095/GCA_001495095.1_SS_2261	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.90176	55	-	FKHK01	40	4827	4601	4/6/16	3/28/17	Scaffold	SC	SAMEA2273259	GCA_900077965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/965/GCA_900077965.1_11983_7_34	-	e880
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.08319	64.1	-	FVWO01	26	5093	4982	3/10/17	3/18/17	Contig	SC	SAMEA2155144	GCA_900140595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/595/GCA_900140595.1_10702_1_23	-	596
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.83215	64.2	-	FSPE01	19	4781	4657	12/14/16	3/21/17	Contig	SC	SAMEA2147770	GCA_900140695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/695/GCA_900140695.1_10702_1_35	-	613
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.66735	55.6	-	FKHM01	42	4549	4265	4/6/16	3/28/17	Scaffold	SC	SAMEA2273261	GCA_900077975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/975/GCA_900077975.1_11983_7_36	-	e894
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.57121	31.7	-	FBKD01	19	1584	1524	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683332	GCA_001495115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/115/GCA_001495115.1_H094560713	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.80605	67.9	-	CHFJ01	501	3748	3250	4/21/15	3/26/17	Scaffold	SC	SAMEA751222	GCA_001332095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/095/GCA_001332095.1_5601_1_8	-	B053
Enterococcus faecium	1352	PRJNA306168	306168	Terrabacteria group	Firmicutes	2.97129	38	-	LRBA01	201	3127	2888	2/1/16	3/27/17	Scaffold	brown University/Rhode Island Hospital	SAMN04414052	GCA_001543645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/645/GCA_001543645.1_ASM154364v1	-	D344RRF x C68
Enterococcus faecalis 06-MB-DW-09	1260358	PRJNA179533	179533	Terrabacteria group	Firmicutes	4.19006	41.9	-	ATIM01	123	4469	4431	6/25/13	12/6/13	Scaffold	The Genome Institute	SAMN02436836	GCA_000415145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/145/GCA_000415145.1_ASM41514v1	-	06-MB-DW-09
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.56097	57.1	-	LFBM01	13	5597	5330	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280427	GCA_001034285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/285/GCA_001034285.1_Kleb_pneu_UCI92_V1	-	UCI92
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.14054	45.2	-	MISF01	132	4864	4691	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368269	GCA_001727125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/125/GCA_001727125.1_ASM172712v1	-	GCSL_R131
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.20755	28.9	-	FAMM01	997	3797	3631	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664410	GCA_900011165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/165/GCA_900011165.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.94595	47.5	-	CWPH01	255	3710	3549	7/16/15	3/26/17	Scaffold	SC	SAMEA889206	GCA_001248465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/465/GCA_001248465.1_4056_2_4	-	V212-1
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.14659	68.2	-	CSLA01	93	7434	6920	3/23/15	3/26/17	Scaffold	SC	SAMEA949342	GCA_001197235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/235/GCA_001197235.1_7915_5_18	-	6./96
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.78351	50.6	-	CXGA01	415	5265	4656	7/16/15	2/24/17	Scaffold	SC	SAMEA1013801	GCA_001256175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/175/GCA_001256175.1_6496_8_12	-	SS105559_2712861
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.44207	38.3	-	FJHU01	28	3126	3005	2/20/16	3/27/17	Scaffold	SC	SAMEA2059992	GCA_900053415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/415/GCA_900053415.1_10060_4_56	-	2531STDY5467337
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.06282	41.1	-	FIJS01	59	2111	1978	2/10/16	3/19/17	Contig	SC	SAMEA1316707	GCA_900056855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/855/GCA_900056855.1_7054_7_84	-	SS1021
Streptococcus agalactiae	1311	PRJNA288578	288578	Terrabacteria group	Firmicutes	2.0457	35.3	-	LGAH01	361	2149	1972	1/5/16	3/19/17	Contig	MSU	SAMN03801951	GCA_001484865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/865/GCA_001484865.1_ASM148486v1	26950320	GB00037
Acinetobacter baumannii 73736	1310741	PRJNA194817	194817	Proteobacteria	Gammaproteobacteria	3.90293	39.1	-	JFFE01	105	3871	3606	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404540	GCA_000584055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/055/GCA_000584055.1_ASM58405v1	-	73736
Pseudomonas aeruginosa MPAO1/P1	1131757	PRJNA80839	80839	Proteobacteria	Gammaproteobacteria	6.26081	66.6	-	AHKM01	140	5969	5789	2/8/12	5/19/17	Contig	Argonne National Laboratory	SAMN02471696	GCA_000247435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/435/GCA_000247435.2_ASM24743v2	22952955	MPAO1/P1
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.19348	51.6	-	FEUL01	101	2563	2201	2/9/16	3/21/17	Scaffold	SC	SAMEA2673896	GCA_900025535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/535/GCA_900025535.1_14355_6_49	-	2842STDY5881198
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.71751	39.4	-	MILH01	319	1700	1499	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569575	GCA_002026585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/585/GCA_002026585.1_MC2011-41_v1.0	28293542	MG2011-41
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10281	39.6	-	CMEV01	66	2272	2051	3/21/15	3/4/17	Contig	SC	SAMEA1028922	GCA_001099245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/245/GCA_001099245.1_7011_5_22	-	SMRU2806
Escherichia coli PA14	1005495	PRJNA65855	65855	Proteobacteria	Gammaproteobacteria	5.46914	50.3	-	AKLG01	560	5951	5476	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435936	GCA_000267845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/845/GCA_000267845.2_ASM26784v2	-	PA14
Mycobacterium tuberculosis XTB13-212	1427289	PRJNA229687	229687	Terrabacteria group	Actinobacteria	4.40008	65.5	-	JLIJ01	6	4272	4103	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419645	GCA_000655615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/615/GCA_000655615.1_Myco_tube_XTB13-212_V1	-	XTB13-212
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.997	37.9	-	CWKR01	80	3120	2946	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466589	GCA_001489895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/895/GCA_001489895.1_2012_318878_12	-	-
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.78155	30.3	-	CZIQ01	89	1916	1769	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556550	GCA_001407075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/075/GCA_001407075.1_47_S45	-	Campylobacter jejuni
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	5.15832	52.2	-	LYRT01	585	5231	4983	9/15/16	3/1/17	Scaffold	U.S. Food and Drug Administration	SAMN05172537	GCA_001729045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/045/GCA_001729045.1_ASM172904v1	-	ST478
Staphylococcus aureus M0551	1388516	PRJNA216689	216689	Terrabacteria group	Firmicutes	2.95207	33	-	JBAN01	37	3101	2923	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325640	GCA_000529695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/695/GCA_000529695.1_Stap_aure_M0551_V1	-	M0551
Staphylococcus aureus M0561	1388517	PRJNA216690	216690	Terrabacteria group	Firmicutes	2.91241	33	-	JBAM01	15	3042	2876	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02325641	GCA_000529735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/735/GCA_000529735.1_Stap_aure_M0561_V1	-	M0561
Salmonella enterica	28901	PRJNA327110	327110	Proteobacteria	Gammaproteobacteria	4.80447	52.1	-	MBOO01	44	4945	4700	5/16/17	5/30/17	Scaffold	Health Canada	SAMN05301511	GCA_002144355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/355/GCA_002144355.1_ASM214435v1	-	STy1039_1
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.7418	30.2	-	CZIP01	63	1823	1666	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556521	GCA_001407095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/095/GCA_001407095.1_18_S17	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.06339	37.8	-	CWMA01	202	3190	3026	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466576	GCA_001490035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/035/GCA_001490035.1_2012_306293_17	-	-
Mycobacterium tuberculosis XTB13-213	1427290	PRJNA229688	229688	Terrabacteria group	Actinobacteria	4.41826	65.6	-	JLII01	4	4311	4101	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419646	GCA_000655635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/635/GCA_000655635.1_Myco_tube_XTB13-213_V1	-	XTB13-213
Escherichia coli PA10	1005494	PRJNA65853	65853	Proteobacteria	Gammaproteobacteria	5.56905	50.3	-	AKLF01	485	6119	5583	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435935	GCA_000267865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/865/GCA_000267865.2_ASM26786v2	-	PA10
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00584	39.7	-	COAC02	120	2183	1977	3/23/15	3/5/17	Contig	SC	SAMEA1463083	GCA_001099325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/325/GCA_001099325.2_7553_5_95	-	PT8093
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.65062	39	-	MILD01	88	1634	1472	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569571	GCA_002026595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/595/GCA_002026595.1_MG2005-98_v1.0	28293542	MG2005-98
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.17218	51.6	-	FEUV01	73	2516	2164	2/9/16	3/19/17	Scaffold	SC	SAMEA2673962	GCA_900025545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/545/GCA_900025545.1_14355_6_76	-	2842STDY5881225
Pseudomonas aeruginosa MPAO1/P2	1131758	PRJNA80841	80841	Proteobacteria	Gammaproteobacteria	6.27634	66.5	-	AHKN01	301	6087	5784	2/8/12	5/19/17	Contig	Argonne National Laboratory	SAMN02471697	GCA_000247455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/455/GCA_000247455.2_ASM24745v2	22952955	MPAO1/P2
Acinetobacter baumannii 10519	1310749	PRJNA194825	194825	Proteobacteria	Gammaproteobacteria	3.99889	39.3	-	JFFF01	117	3946	3634	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404478	GCA_000584075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/075/GCA_000584075.1_ASM58407v1	-	10519
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.01772	35.2	-	MBSM01	44	2066	1956	7/22/16	3/20/17	Contig	Novartis Vaccines	SAMN04481645	GCA_001692935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/935/GCA_001692935.1_ASM169293v1	27411639	NOVUI-4
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.03657	41.2	-	FIPC01	28	2042	1930	2/10/16	3/19/17	Contig	SC	SAMEA1566131	GCA_900056865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/865/GCA_900056865.1_8337_6_77	-	EN515
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54127	38.3	-	FJKY01	61	3241	3088	2/20/16	3/27/17	Scaffold	SC	SAMEA2080787	GCA_900054655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/655/GCA_900054655.1_10625_3_44	-	2532STDY5467613
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.48071	50.8	-	CWTC01	406	5114	4208	7/16/15	2/24/17	Scaffold	SC	SAMEA3345039	GCA_001256215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/215/GCA_001256215.1_H14086038001	-	38001ss_1
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.01041	68.3	-	CSLN01	63	7218	6760	3/23/15	3/26/17	Scaffold	SC	SAMEA949459	GCA_001197355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/355/GCA_001197355.1_7910_7_16	-	15-40
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.03167	47.9	-	CWQT01	127	3768	3205	7/16/15	3/26/17	Scaffold	SC	SAMEA889235	GCA_001248645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/645/GCA_001248645.1_4370_2_10	-	6214
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.30313	29.2	-	FAMO01	1535	3857	3621	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664411	GCA_900011175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/175/GCA_900011175.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.06602	45.4	-	MISG01	141	4844	4649	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368270	GCA_001727155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/155/GCA_001727155.1_ASM172715v1	-	GCSL_R135
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.5989	57.2	-	LFBN01	16	5701	5455	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280428	GCA_001034295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/295/GCA_001034295.1_Kleb_pneu_UCI93_V1	-	UCI93
Enterococcus faecalis ATCC 29212	1201292	PRJNA169315	169315	Terrabacteria group	Firmicutes	3.02706	37.2	-	ALOD01	126	2443	2347	8/17/12	1/8/14	Contig	"University of California, Davis"	SAMN02471683	GCA_000291565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/291/565/GCA_000291565.1_ASM29156v1	23045510	ATCC 29212
Enterococcus faecium	1352	PRJNA306168	306168	Terrabacteria group	Firmicutes	3.09839	38	-	LRAX01	241	3262	2992	2/1/16	3/27/17	Scaffold	brown University/Rhode Island Hospital	SAMN04414045	GCA_001543665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/665/GCA_001543665.1_ASM154366v1	-	D344RRF x C68
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.76892	67.8	-	CHFG01	782	3787	3169	4/21/15	3/26/17	Scaffold	SC	SAMEA751244	GCA_001332115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/115/GCA_001332115.1_5601_5_10	-	B322
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66103	31.4	-	FBCQ01	26	1717	1628	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683121	GCA_001495135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/135/GCA_001495135.1_EC3397	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.19081	55.5	-	FKHI01	44	5145	4876	4/6/16	3/28/17	Scaffold	SC	SAMEA2273260	GCA_900077985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/985/GCA_900077985.1_11983_7_35	-	e884
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.26515	64.1	-	FSPD01	17	5305	5192	12/14/16	3/21/17	Contig	SC	SAMEA2149349	GCA_900140705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/705/GCA_900140705.1_10702_1_34	-	612
Pseudomonas sp. UBA2684	1947311	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.8333	62.2	-	DELY01	59	-	-	9/25/17	9/25/17	Scaffold	University of Queensland	SAMN06453897	GCA_002354655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/354/655/GCA_002354655.1_ASM235465v1	28894102	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.84157	64.1	-	FVWZ01	18	4804	4667	3/10/17	3/18/17	Contig	SC	SAMEA2163129	GCA_900140735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/735/GCA_900140735.1_10702_1_37	-	616
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.72872	55.1	-	FKHL01	46	4618	4365	4/6/16	3/28/17	Scaffold	SC	SAMEA2273483	GCA_900077995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/077/995/GCA_900077995.1_12082_4_57	-	e888
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.74877	31.2	-	FBEQ01	33	1852	1751	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683182	GCA_001495155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/155/GCA_001495155.1_SS_2296	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.78306	67.8	-	CGFT01	666	3773	3192	3/15/15	3/26/17	Scaffold	SC	SAMEA751246	GCA_001332135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/135/GCA_001332135.1_5601_5_11	-	B324
Enterococcus faecium	1352	PRJNA306168	306168	Terrabacteria group	Firmicutes	3.13535	38.2	-	LRAY01	262	3339	3038	2/1/16	3/27/17	Scaffold	brown University/Rhode Island Hospital	SAMN04414040	GCA_001543675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/675/GCA_001543675.1_ASM154367v1	-	D344RRF x C68
Enterococcus faecalis CBRD01	1400521	PRJNA219100	219100	Terrabacteria group	Firmicutes	2.81317	37.5	-	AWYG01	140	1887	1874	11/25/13	8/5/14	Contig	Igenbio Inc	SAMN02951935	GCA_000499025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/025/GCA_000499025.1_NHR	24675849	CBRD01
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.56948	57.1	-	LFBO01	14	5586	5344	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280429	GCA_001034305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/305/GCA_001034305.1_Kleb_pneu_UCI94_V1	-	UCI94
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.0984	45.3	-	MISH01	139	4805	4595	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368271	GCA_001727185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/185/GCA_001727185.1_ASM172718v1	-	GCSL_R136
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.53652	29	-	FAND01	1546	4297	4006	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664426	GCA_900011185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/185/GCA_900011185.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.98199	47.5	-	CWOM01	75	3759	3446	7/16/15	3/26/17	Scaffold	SC	SAMEA889376	GCA_001248905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/905/GCA_001248905.1_4056_5_10	-	A70
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08985	68.2	-	CSME01	76	7304	6786	3/23/15	3/26/17	Scaffold	SC	SAMEA806995	GCA_001197775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/775/GCA_001197775.1_7907_5_3	-	C3
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.50242	50.8	-	CXAK01	376	4964	4272	7/17/15	2/24/17	Scaffold	SC	SAMEA2445771	GCA_001256235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/235/GCA_001256235.1_12971_8_79	-	H135080163
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.54258	38.3	-	FJKS01	58	3244	3091	2/20/16	3/27/17	Scaffold	SC	SAMEA2077980	GCA_900056205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/205/GCA_900056205.1_10625_3_48	-	2532STDY5467617
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.06558	41.1	-	FIQH01	25	2080	1969	2/10/16	3/19/17	Contig	SC	SAMEA1566171	GCA_900056875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/875/GCA_900056875.1_8525_5_47	-	SS61
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.15131	35.4	-	MAMW01	55	2186	2081	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481581	GCA_001693835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/835/GCA_001693835.1_ASM169383v1	27411639	1999
Acinetobacter baumannii 846928	1310748	PRJNA194824	194824	Proteobacteria	Gammaproteobacteria	3.90547	38.9	-	JFFD01	58	3789	3594	3/3/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02404544	GCA_000584095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/095/GCA_000584095.1_ASM58409v1	-	846928
Pseudomonas aeruginosa LCT-PA102	1168061	PRJNA156843	156843	Proteobacteria	Gammaproteobacteria	6.75243	66.2	-	AJKG01	180	6472	6298	4/9/12	5/19/17	Contig	BGI	SAMN02469384	GCA_000258285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/285/GCA_000258285.1_ASM25828v1	22740676	LCT-PA102
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16784	51.6	-	FEWB01	68	2522	2174	2/9/16	3/19/17	Scaffold	SC	SAMEA2674108	GCA_900025555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/555/GCA_900025555.1_14324_4_53	-	2842STDY5881298
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.69192	39.1	-	MILE01	159	1700	1486	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569572	GCA_002026625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/625/GCA_002026625.1_MG2006-4_v1.0	28293542	MG2006-4
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.1039	39.5	-	CKRR01	64	2335	2088	3/21/15	3/4/17	Contig	SC	SAMEA1023935	GCA_001099345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/345/GCA_001099345.1_6680_8_14	-	SMRU206
Escherichia coli PA9	1005493	PRJNA65851	65851	Proteobacteria	Gammaproteobacteria	5.41796	50.3	-	AKLE01	386	5867	5398	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435989	GCA_000267885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/885/GCA_000267885.2_ASM26788v2	23516226	PA9
Mycobacterium tuberculosis XTB13-214	1427291	PRJNA229689	229689	Terrabacteria group	Actinobacteria	4.40043	65.6	-	JLIH01	3	4270	4104	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419647	GCA_000655655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/655/GCA_000655655.1_Myco_tube_XTB13-214_V1	-	XTB13-214
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.03621	37.8	-	CWLO01	105	3151	2999	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466572	GCA_001490055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/055/GCA_001490055.1_2012_292995_17	-	-
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.82039	30.1	-	CZHG01	155	1945	1784	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556505	GCA_001407115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/115/GCA_001407115.1_1_S1	-	Campylobacter jejuni
Salmonella enterica	28901	PRJNA327110	327110	Proteobacteria	Gammaproteobacteria	4.95508	52.1	-	MBOP01	56	5161	4864	5/16/17	5/30/17	Scaffold	Health Canada	SAMN05301512	GCA_002144365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/365/GCA_002144365.1_ASM214436v1	-	STy1039_100
Staphylococcus aureus M0570	1388518	PRJNA216691	216691	Terrabacteria group	Firmicutes	2.90624	32.9	-	JBAL01	21	3040	2875	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325642	GCA_000529795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/795/GCA_000529795.1_Stap_aure_M0570_V1	-	M0570
Staphylococcus aureus M0594	1388519	PRJNA216692	216692	Terrabacteria group	Firmicutes	2.93824	33	-	JBAK01	6	3028	2830	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325643	GCA_000529835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/835/GCA_000529835.1_Stap_aure_M0594_V1	-	M0594
Salmonella enterica	28901	PRJNA327110	327110	Proteobacteria	Gammaproteobacteria	5.1745	52.1	-	MBOT01	56	5378	5085	5/16/17	5/30/17	Scaffold	Health Canada	SAMN05301532	GCA_002144435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/435/GCA_002144435.1_ASM214443v1	-	SN2667_100
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.69384	30.4	-	CZHH01	57	1769	1663	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556551	GCA_001407135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/135/GCA_001407135.1_49_S46	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.04002	37.9	-	CWLC01	49	3104	2984	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466595	GCA_001490075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/075/GCA_001490075.1_2012_326368_17	-	-
Mycobacterium tuberculosis XTB13-216	1427292	PRJNA229690	229690	Terrabacteria group	Actinobacteria	4.42835	65.5	-	JLIG01	3	4315	4119	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419648	GCA_000655675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/675/GCA_000655675.1_Myco_tube_XTB13-216_V1	-	XTB13-216
Escherichia coli PA5	1005490	PRJNA65845	65845	Proteobacteria	Gammaproteobacteria	5.34711	50.3	-	AKLD01	512	5787	5332	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435988	GCA_000267905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/905/GCA_000267905.2_ASM26790v2	23516226	PA5
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12461	39.9	-	CLDL01	69	2361	2123	3/21/15	3/11/17	Contig	SC	SAMEA1026026	GCA_001099425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/425/GCA_001099425.1_6899_5_13	-	SMRU2053
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.65098	39	-	MILG01	114	1645	1477	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569574	GCA_002026645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/645/GCA_002026645.1_MG2006-479_v1.0	28293542	MG2006-479
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16837	51.5	-	FEWA01	100	2533	2159	2/9/16	3/21/17	Scaffold	SC	SAMEA2674122	GCA_900025565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/565/GCA_900025565.1_14324_4_60	-	2842STDY5881305
Pseudomonas aeruginosa PADK2_CF510	1134459	PRJNA81219	81219	Proteobacteria	Gammaproteobacteria	6.68316	66.1	-	AJHI01	71	6449	6048	4/17/12	5/19/17	Contig	DTU Systems Biology	SAMN02471032	GCA_000259025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/025/GCA_000259025.1_ASM25902v1	22672046	PADK2_CF510
Acinetobacter baumannii 1045092	1310739	PRJNA194815	194815	Proteobacteria	Gammaproteobacteria	4.10455	39.2	-	JFFC01	113	4097	3781	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404546	GCA_000584115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/115/GCA_000584115.1_ASM58411v1	-	1045092
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.18832	35.3	-	MANA01	45	2255	2138	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481587	GCA_001693845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/845/GCA_001693845.1_ASM169384v1	27411639	AB-11
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.06242	41.1	-	FIQO01	19	2080	1967	2/10/16	3/19/17	Contig	SC	SAMEA1566058	GCA_900056885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/885/GCA_900056885.1_8525_5_53	-	SS76
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.40536	38.2	-	FJBB01	15	3120	2983	2/20/16	3/27/17	Scaffold	SC	SAMEA2059989	GCA_900056645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/645/GCA_900056645.1_10771_1_51	-	2531STDY5467332
Shigella sonnei	624	PRJEB2460	204320	Proteobacteria	Gammaproteobacteria	4.59984	50.9	-	CXFN01	367	5002	4407	7/16/15	2/24/17	Scaffold	SC	SAMEA1027648	GCA_001256275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/275/GCA_001256275.1_6350_1_17	-	sh96-6494
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08913	68.2	-	CSSV01	61	7313	6788	3/23/15	3/26/17	Scaffold	SC	SAMEA807005	GCA_001197795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/795/GCA_001197795.1_7909_4_11	-	C44
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.01407	47.5	-	CWNR01	61	3775	3612	7/16/15	3/26/17	Scaffold	SC	SAMEA889231	GCA_001249085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/085/GCA_001249085.1_4056_2_9	-	MBRN14
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.28584	28.8	-	CZXK01	1634	3860	3730	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3663999	GCA_900011335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/335/GCA_900011335.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.10738	45.3	-	MISI01	127	4812	4606	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368272	GCA_001727195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/195/GCA_001727195.1_ASM172719v1	-	GCSL_R137
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.76105	57.1	-	LFBP01	10	5845	5572	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280430	GCA_001034325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/325/GCA_001034325.1_Kleb_pneu_UCI95_V1	-	UCI95
Enterococcus faecalis PF3	1410655	PRJNA223434	223434	Terrabacteria group	Firmicutes	3.21386	37.5	-	AZIA01	397	3364	3173	12/10/13	3/4/14	Contig	Queensland University of Technology	SAMN02380586	GCA_000505585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/585/GCA_000505585.1_E._faecalis_PF3_draft_genome	24459271	PF3
Enterococcus faecium	1352	PRJNA306168	306168	Terrabacteria group	Firmicutes	2.97883	38	-	LRAZ01	203	3148	2883	2/1/16	3/27/17	Scaffold	brown University/Rhode Island Hospital	SAMN04414051	GCA_001543715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/715/GCA_001543715.1_ASM154371v1	-	D344RRF x C68
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.6916	67.6	-	CFXZ01	1071	3767	2972	3/15/15	3/26/17	Scaffold	SC	SAMEA751248	GCA_001332155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/155/GCA_001332155.1_5601_3_4	-	B327
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.84744	31	-	FBGM01	73	1903	1774	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683228	GCA_001495175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/175/GCA_001495175.1_F14B4C4	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.80014	55.5	-	FKHN01	25	4729	4509	4/6/16	3/28/17	Scaffold	SC	SAMEA2273262	GCA_900078005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/005/GCA_900078005.1_11983_7_37	-	e901
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.05165	64.1	-	FSPH01	22	5083	4927	12/14/16	3/21/17	Contig	SC	SAMEA2146169	GCA_900140795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/795/GCA_900140795.1_10702_1_44	-	625
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.50556	64.1	-	FVXC01	26	5661	5488	3/10/17	3/18/17	Contig	SC	SAMEA2144583	GCA_900140805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/805/GCA_900140805.1_10702_1_42	-	622
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.67218	55.6	-	FKHO01	17	4519	4354	4/6/16	3/28/17	Scaffold	SC	SAMEA2273263	GCA_900078015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/015/GCA_900078015.1_11983_7_38	-	e903
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66067	31.4	-	FBAJ01	27	1721	1625	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683066	GCA_001495215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/215/GCA_001495215.1_EC3774	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.83226	67.9	-	CFZK01	329	3685	3314	3/15/15	3/26/17	Scaffold	SC	SAMEA751257	GCA_001332175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/175/GCA_001332175.1_5601_3_6	-	B329
Enterococcus faecium	1352	PRJNA306168	306168	Terrabacteria group	Firmicutes	2.99272	38.1	-	LRBD01	200	3179	2918	2/1/16	3/27/17	Scaffold	brown University/Rhode Island Hospital	SAMN04414055	GCA_001543735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/735/GCA_001543735.1_ASM154373v1	-	D344RRF x C68
Enterococcus faecalis DORA_14	1403942	PRJNA221487	221487	Terrabacteria group	Firmicutes	2.96586	37.2991	plasmid pEFPL_DORA_14:AZLY01000050.1	AZLY01	50	2911	2911	12/16/13	12/16/13	Contig	"University of California, Berkeley"	SAMN02316559	GCA_000508705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/705/GCA_000508705.1_EntFaec_DORA_14_velvet_1.1	-	-
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.46703	57.3	-	LFBQ01	3	5434	5175	6/19/15	2/21/17	Scaffold	Broad Institute	SAMN03280431	GCA_001034365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/365/GCA_001034365.1_Kleb_pneu_UCI96_V1	-	UCI96
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.10884	45.3	-	MISJ01	148	4817	4606	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368273	GCA_001727205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/205/GCA_001727205.1_ASM172720v1	-	GCSL_R138
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	3.97793	28.6	-	CZXY01	946	3604	3387	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664029	GCA_900011345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/345/GCA_900011345.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.98155	47.7	-	CWOX01	123	3773	3546	7/16/15	4/10/17	Scaffold	SC	SAMEA889368	GCA_001249315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/315/GCA_001249315.1_3002_8_3	-	4322
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.09282	68.2	-	CSKR01	66	7328	6830	3/23/15	3/26/17	Scaffold	SC	SAMEA949324	GCA_001197955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/955/GCA_001197955.1_7915_5_11	-	488
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.6862	50.7	-	CXMJ01	390	5336	4526	7/16/15	2/24/17	Scaffold	SC	SAMEA2057217	GCA_001256295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/295/GCA_001256295.1_9870_6_14	-	143267
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.59592	38.3	-	FJIJ01	73	3298	3133	2/20/16	3/27/17	Scaffold	SC	SAMEA2077780	GCA_900060425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/425/GCA_900060425.1_10625_2_76	-	2532STDY5467549
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.25646	41.2	-	FIIE01	40	2225	2101	2/10/16	3/19/17	Contig	SC	SAMEA1316532	GCA_900057045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/045/GCA_900057045.1_7114_5_80	-	LSS80
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.02258	35.3	-	MAUV01	31	2084	1932	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481586	GCA_001693855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/855/GCA_001693855.1_ASM169385v1	27411639	404562
Acinetobacter baumannii 923118	1310708	PRJNA194784	194784	Proteobacteria	Gammaproteobacteria	4.19261	39.1	-	JFFB01	172	4240	3907	3/3/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02404545	GCA_000584135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/135/GCA_000584135.1_ASM58413v1	-	923118
Pseudomonas aeruginosa XMG	1169413	PRJNA157339	157339	Proteobacteria	Gammaproteobacteria	6.45381	66.4	-	AJXX01	225	6170	5952	6/4/12	5/19/17	Contig	Shanghai Jiao Tong University	SAMN02470958	GCA_000265035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/035/GCA_000265035.1_ASM26503v1	22887660	XMG
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11002	51.8	-	FEWN01	100	2461	2139	2/9/16	3/21/17	Scaffold	SC	SAMEA2674289	GCA_900025575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/575/GCA_900025575.1_14555_6_68	-	2842STDY5881505
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.65393	38.9	-	MILI01	111	1646	1459	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569576	GCA_002026665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/665/GCA_002026665.1_MGms13_v1.0	28293542	MGms13
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.05227	39.5	-	CPPK01	105	2226	2012	3/23/15	3/11/17	Contig	SC	SAMEA770015	GCA_001099605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/605/GCA_001099605.1_5242_2_4	-	9L/2
Escherichia coli PA3	1005488	PRJNA65841	65841	Proteobacteria	Gammaproteobacteria	5.36831	50.3	-	AKLC01	428	5859	5363	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435987	GCA_000267925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/925/GCA_000267925.2_ASM26792v2	23516226	PA3
Mycobacterium tuberculosis XTB13-217	1427293	PRJNA229691	229691	Terrabacteria group	Actinobacteria	4.43793	65.6	-	JLIF01	7	4324	4107	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419649	GCA_000655695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/695/GCA_000655695.1_Myco_tube_XTB13-217_V1	-	XTB13-217
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.01215	37.9	-	CWLP01	56	3090	2987	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466556	GCA_001490115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/115/GCA_001490115.1_2011_172904_10c	-	-
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.66957	30.4	-	CZHR01	87	1757	1619	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556543	GCA_001407195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/195/GCA_001407195.1_40_S38	-	Campylobacter jejuni
Salmonella enterica	28901	PRJNA327110	327110	Proteobacteria	Gammaproteobacteria	5.17379	52.1	-	MBOS01	53	5381	5085	5/16/17	5/30/17	Scaffold	Health Canada	SAMN05301515	GCA_002144455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/455/GCA_002144455.1_ASM214445v1	-	SN2667_1
Staphylococcus aureus M0608	1388520	PRJNA216693	216693	Terrabacteria group	Firmicutes	2.95814	33.2	-	JBAJ01	16	3066	2890	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325644	GCA_000529875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/875/GCA_000529875.1_Stap_aure_M0608_V1	-	M0608
Staphylococcus aureus M0620	1388521	PRJNA216694	216694	Terrabacteria group	Firmicutes	2.89026	33	-	JBAI01	20	3005	2832	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325645	GCA_000529915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/915/GCA_000529915.1_Stap_aure_M0620_V1	-	M0620
Salmonella enterica	28901	PRJNA327110	327110	Proteobacteria	Gammaproteobacteria	4.89194	52.2	-	MBOU01	38	5067	4826	5/16/17	5/30/17	Scaffold	Health Canada	SAMN05301533	GCA_002144475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/475/GCA_002144475.1_ASM214447v1	-	SN0033_1
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.65722	30.5	-	CZJK01	65	1756	1653	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556566	GCA_001407315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/315/GCA_001407315.1_64_S62	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.00771	37.9	-	CWLG01	31	3096	2992	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466588	GCA_001490275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/275/GCA_001490275.1_2012_313587_9	-	-
Mycobacterium tuberculosis XTB13-218	1427294	PRJNA229692	229692	Terrabacteria group	Actinobacteria	4.42435	65.6	-	JLIE01	4	4319	4115	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419650	GCA_000655715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/715/GCA_000655715.1_Myco_tube_XTB13-218_V1	-	XTB13-218
Escherichia coli 93-001	1005481	PRJNA65775	65775	Proteobacteria	Gammaproteobacteria	5.37849	50.3	-	AKLB01	438	5825	5384	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435949	GCA_000267945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/945/GCA_000267945.2_ASM26794v2	-	93-001
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.04593	39.7	-	CIMP01	121	2221	2037	3/21/15	3/11/17	Contig	SC	SAMEA1024778	GCA_001099865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/865/GCA_001099865.1_6714_7_9	-	SMRU753
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.69279	38.8	-	MILJ01	88	1695	1487	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569577	GCA_002026675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/675/GCA_002026675.1_MGms15_v1.0	28293542	MGms15
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11778	51.8	-	FEWR01	91	2463	2138	2/9/16	3/19/17	Scaffold	SC	SAMEA2674335	GCA_900025585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/585/GCA_900025585.1_14555_6_93	-	2842STDY5881530
Pseudomonas aeruginosa MRW44.1	1198629	PRJNA168334	168334	Proteobacteria	Gammaproteobacteria	6.26691	66.5	-	ALBW01	54	5950	5779	7/30/12	5/19/17	Contig	Michigan State University	SAMN02470548	GCA_000282915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/915/GCA_000282915.1_MWR44.1-1.0	22869726	MRW44.1
Acinetobacter baumannii 836190	1310727	PRJNA194803	194803	Proteobacteria	Gammaproteobacteria	4.04175	39.2	-	JFFA01	115	4012	3752	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404543	GCA_000584155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/155/GCA_000584155.1_ASM58415v1	-	836190
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.08084	35.3	-	MAMZ01	53	2142	2014	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481584	GCA_001693865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/865/GCA_001693865.1_ASM169386v1	27411639	5877
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	1.96335	41.3	-	FIJP01	22	1993	1856	2/10/16	3/19/17	Contig	SC	SAMEA1316674	GCA_900057055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/055/GCA_900057055.1_7054_7_85	-	SS1022
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.53907	38.3	-	FJIK01	66	3237	3086	2/20/16	3/27/17	Scaffold	SC	SAMEA2080681	GCA_900060435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/435/GCA_900060435.1_10625_2_71	-	2532STDY5467544
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.64675	50.7	-	CXHC01	389	5247	4460	7/16/15	2/24/17	Scaffold	SC	SAMEA1324230	GCA_001256315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/315/GCA_001256315.1_7655_8_8	-	H112540446
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.01699	68.3	-	CSLM01	62	7226	6750	3/22/15	3/26/17	Scaffold	SC	SAMEA949434	GCA_001198755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/755/GCA_001198755.1_7910_7_7	-	Dec-40
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.03139	47.6	-	CWQQ01	93	3792	3463	7/17/15	3/26/17	Scaffold	SC	SAMEA889210	GCA_001249515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/515/GCA_001249515.1_4370_2_11	-	6191
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.19775	29.1	-	CZYD01	1319	3881	3700	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664036	GCA_900011355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/355/GCA_900011355.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.08493	45.2	-	MISN01	172	4833	4627	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN03358826	GCA_001727245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/245/GCA_001727245.1_ASM172724v1	-	GCSL_R146
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.34248	57.4	-	JUQV01	715	5568	5016	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03198053	GCA_001066585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/585/GCA_001066585.1_ASM106658v1	26230489	845_KPNE
Enterococcus faecalis	1351	PRJNA245090	245090	Terrabacteria group	Firmicutes	3.10643	37.5	-	JMEC01	38	3051	2734	5/28/14	6/24/14	Contig	Kingston Uniiversity	SAMN02731558	GCA_000696265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/265/GCA_000696265.1_ASM69626v1	24948775	MB 5259
Enterococcus faecium	1352	PRJNA306168	306168	Terrabacteria group	Firmicutes	3.00713	38.1	-	LRBE01	195	3178	2934	2/1/16	3/27/17	Scaffold	brown University/Rhode Island Hospital	SAMN04414056	GCA_001543745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/745/GCA_001543745.1_ASM154374v1	-	D344RRF x C68
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.69211	67.6	-	CFWV01	1077	3763	2964	3/15/15	3/27/17	Scaffold	SC	SAMEA751286	GCA_001332195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/195/GCA_001332195.1_5476_2_2	-	B263
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.76387	31.2	-	FBII01	35	1859	1767	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683283	GCA_001495235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/235/GCA_001495235.1_H140420134	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.4535	54.3	-	FKHQ01	98	5488	5176	4/6/16	3/28/17	Scaffold	SC	SAMEA2273264	GCA_900078025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/025/GCA_900078025.1_11983_7_39	-	e912
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98152	64.1	-	FSPI01	13	4957	4834	12/14/16	3/21/17	Contig	SC	SAMEA2156366	GCA_900140815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/815/GCA_900140815.1_10702_1_46	-	629
Pseudomonas sp. UBA3550	1947314	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.11177	61.7	-	DFOD01	199	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452312	GCA_002376525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/376/525/GCA_002376525.1_ASM237652v1	28894102	-
Pseudomonas sp. UBA4194	1947317	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.99047	62	-	DFUE01	90	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455645	GCA_002379585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/585/GCA_002379585.1_ASM237958v1	28894102	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23764	64.1	-	FSPO01	23	5281	5163	12/14/16	3/21/17	Contig	SC	SAMEA2155017	GCA_900140915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/915/GCA_900140915.1_10702_1_57	-	649
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.1773	54.9	-	FKHP01	56	5045	4827	4/6/16	3/28/17	Scaffold	SC	SAMEA2273265	GCA_900078035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/035/GCA_900078035.1_11983_7_40	-	e914
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.57337	31.8	-	FAZW01	18	1578	1512	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683055	GCA_001495275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/275/GCA_001495275.1_H082280515	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.75396	67.7	-	CFYY01	868	3778	3079	3/15/15	3/27/17	Scaffold	SC	SAMEA751288	GCA_001332215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/215/GCA_001332215.1_5476_2_3	-	B257
Enterococcus faecium	1352	PRJNA306168	306168	Terrabacteria group	Firmicutes	2.97291	38	-	LRBB01	201	3132	2895	2/1/16	3/27/17	Scaffold	brown University/Rhode Island Hospital	SAMN04414053	GCA_001543765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/765/GCA_001543765.1_ASM154376v1	-	D344RRF x C68
Enterococcus faecalis 68A	1458467	PRJNA237253	237253	Terrabacteria group	Firmicutes	3.0497	37.3	-	JOOC01	9	-	-	6/25/14	6/25/14	Contig	DOE Joint Genome Institute	SAMN02744689	GCA_000712065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/065/GCA_000712065.1_ASM71206v1	-	68A
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.42165	57.2	-	JUUI01	240	5386	5180	7/10/15	2/25/17	Scaffold	University of Washington	SAMN03197962	GCA_001067135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/135/GCA_001067135.1_ASM106713v1	26230489	755.rep1_KPNE
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	4.94778	45.4	-	MISK01	148	4686	4494	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368274	GCA_001727265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/265/GCA_001727265.1_ASM172726v1	-	GCSL_R143
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.21177	29.1	-	CZYC01	1245	3829	3555	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664035	GCA_900011365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/365/GCA_900011365.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.96422	47.4	-	CWQK01	75	3750	3543	7/16/15	3/26/17	Scaffold	SC	SAMEA889174	GCA_001249715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/715/GCA_001249715.1_4075_3_2	-	GP152
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.01098	68.3	-	CSKJ01	81	7228	6752	3/22/15	3/26/17	Scaffold	SC	SAMEA949322	GCA_001199035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/035/GCA_001199035.1_7915_5_9	-	DR08726/01
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.5049	50.7	-	CWSZ01	371	5083	4232	7/16/15	2/24/17	Scaffold	SC	SAMEA3345108	GCA_001256335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/335/GCA_001256335.1_H14072036301	-	36301A_1
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.4222	38.3	-	FJDB01	20	3129	2996	2/20/16	3/27/17	Scaffold	SC	SAMEA2060128	GCA_900060725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/725/GCA_900060725.1_10771_1_87	-	2531STDY5467368
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.0635	41.1	-	FINF01	24	2074	1955	2/10/16	3/19/17	Contig	SC	SAMEA1566039	GCA_900057065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/065/GCA_900057065.1_8337_6_29	-	BM346B
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.18642	35.3	-	MANC01	38	2241	2134	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481589	GCA_001693915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/915/GCA_001693915.1_ASM169391v1	27411639	AB-17
Acinetobacter baumannii 825610	1310722	PRJNA194798	194798	Proteobacteria	Gammaproteobacteria	4.07214	38.9	-	JFEZ01	136	4019	3780	3/3/14	3/15/17	Contig	Institute for Genome Sciences	SAMN02404542	GCA_000584175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/175/GCA_000584175.1_ASM58417v1	-	825610
Pseudomonas aeruginosa DQ8	1211113	PRJNA170819	170819	Proteobacteria	Gammaproteobacteria	6.77664	66	-	ALIO01	376	6675	6197	7/30/12	5/19/17	Contig	Shanghai Jiao Tong University	SAMN02470947	GCA_000283055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/055/GCA_000283055.1_DQ8	23105052	DQ8
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16209	51.6	-	FEXH01	81	2530	2154	2/9/16	3/21/17	Scaffold	SC	SAMEA2674389	GCA_900025595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/595/GCA_900025595.1_14324_5_52	-	2842STDY5881585
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.68068	39	-	MILK01	73	1626	1462	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569578	GCA_002026705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/705/GCA_002026705.1_MGms167_v1.0	28293542	MGms167
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.07243	39.6	-	CMCY01	54	2292	2062	3/21/15	3/11/17	Contig	SC	SAMEA1029376	GCA_001099885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/885/GCA_001099885.1_7004_8_91	-	SMRU2923
Escherichia coli FRIK1990	1005478	PRJNA65769	65769	Proteobacteria	Gammaproteobacteria	5.51814	50.3	-	AKLA01	569	6082	5567	6/12/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435934	GCA_000267965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/965/GCA_000267965.2_ASM26796v2	23516226	FRIK1990
Mycobacterium tuberculosis XTB13-219	1427295	PRJNA229693	229693	Terrabacteria group	Actinobacteria	4.4229	65.6	-	JLID01	3	4307	4101	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419651	GCA_000655735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/735/GCA_000655735.1_Myco_tube_XTB13-219_V1	-	XTB13-219
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.02081	37.9	-	CWKS01	57	3086	2991	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466584	GCA_001490355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/355/GCA_001490355.1_2012_313587_5	-	-
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.71916	30.3	-	CZIL01	93	1838	1636	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556510	GCA_001407345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/345/GCA_001407345.1_7_S6	-	Campylobacter jejuni
Salmonella enterica	28901	PRJNA327110	327110	Proteobacteria	Gammaproteobacteria	4.89374	52.2	-	MBOV01	32	5060	4822	5/16/17	5/30/17	Scaffold	Health Canada	SAMN05301534	GCA_002144485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/485/GCA_002144485.1_ASM214448v1	-	SN0033_100
Staphylococcus aureus M0371	1388522	PRJNA216695	216695	Terrabacteria group	Firmicutes	2.91031	33	-	JBAH01	24	3051	2877	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02325646	GCA_000529935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/935/GCA_000529935.1_Stap_aure_M0371_V1	-	M0371
Staphylococcus aureus M0379	1388523	PRJNA216696	216696	Terrabacteria group	Firmicutes	2.87176	32.9	-	JBAG01	14	3018	2852	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325647	GCA_000529995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/995/GCA_000529995.1_Stap_aure_M0379_V1	-	M0379
Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188	439842	PRJNA19457	19457	Proteobacteria	Gammaproteobacteria	5.08934	51.898	plasmid pCVM29188_101:NC_011077.1/CP001121.1; plasmid pCVM29188_146:NC_011076.1/CP001122.1; plasmid pCVM29188_46:NC_011078.1/CP001123.1	ABAK02	4	5195	4870	5/10/07	2/26/17	Contig	TIGR	SAMN02415270	GCA_000170195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/195/GCA_000170195.2_ASM17019v2	21602358	CVM29188
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.66675	30.5	-	CZIE01	110	1773	1610	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556509	GCA_001407365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/365/GCA_001407365.1_5_S5	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.02564	37.8	-	CWMB01	102	3116	2999	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466565	GCA_001490455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/455/GCA_001490455.1_2013_148278_16	-	-
Mycobacterium tuberculosis XTB13-225	1427297	PRJNA229695	229695	Terrabacteria group	Actinobacteria	4.39035	65.6	-	JLIB01	3	4274	4109	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419653	GCA_000655775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/775/GCA_000655775.1_Myco_tube_XTB13-225_V1	-	XTB13-225
Escherichia coli HM605	752789	PRJEA66487	66487	Proteobacteria	Gammaproteobacteria	5.26893	50.6	-	CADZ01	60	5515	5056	5/24/11	5/18/17	Scaffold	University of Birmingham	SAMEA2272492	GCA_000285375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/375/GCA_000285375.1_ASM28537v1	-	HM605
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11739	39.6	-	CKYD01	69	2292	2040	3/21/15	3/11/17	Contig	SC	SAMEA1025811	GCA_001100025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/025/GCA_001100025.1_6823_7_5	-	SMRU1997
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.67243	39	-	MILL01	226	1694	1488	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569579	GCA_002026725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/725/GCA_002026725.1_MGms176_v1.0	28293542	MGms176
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.1293	51.7	-	FEXM01	88	2493	2173	2/9/16	3/19/17	Scaffold	SC	SAMEA2674414	GCA_900025605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/605/GCA_900025605.1_14324_5_77	-	2842STDY5881610
Pseudomonas aeruginosa N002	1194669	PRJNA167366	167366	Proteobacteria	Gammaproteobacteria	6.05047	66.8	-	ALBV02	235	5757	5540	8/15/12	5/19/17	Contig	"CSIR-NEIST, Jorhat"	SAMN00996515	GCA_000287815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/815/GCA_000287815.2_ASM28781v2	23405324	N002
Acinetobacter baumannii 737393	1310735	PRJNA194811	194811	Proteobacteria	Gammaproteobacteria	4.12807	39.2	-	JFEY01	110	4105	3826	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404541	GCA_000584195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/195/GCA_000584195.1_ASM58419v1	-	737393
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.01778	35.2	-	MANE01	49	2062	1954	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481591	GCA_001693925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/925/GCA_001693925.1_ASM169392v1	27411639	AB-24
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05684	41.1	-	FIOA01	24	2080	1953	2/10/16	3/19/17	Contig	SC	SAMEA1566135	GCA_900057075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/075/GCA_900057075.1_8337_6_49	-	EN010
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.3478	38.2	-	FJAU01	20	3036	2917	2/20/16	3/27/17	Scaffold	SC	SAMEA2059982	GCA_900061465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/465/GCA_900061465.1_10771_1_39	-	2531STDY5467320
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.33013	51.2	-	CXCG01	557	4466	3828	7/17/15	2/24/17	Scaffold	SC	SAMEA954569	GCA_001256375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/375/GCA_001256375.1_5236_2_1	-	ShIB1985_440753
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08641	68.2	-	CSMB01	61	7303	6785	3/22/15	3/26/17	Scaffold	SC	SAMEA806990	GCA_001199195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/195/GCA_001199195.1_7909_4_18	-	C51
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.97232	47.9	-	CWPF01	199	3744	3453	7/17/15	3/26/17	Scaffold	SC	SAMEA889288	GCA_001249795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/795/GCA_001249795.1_3002_8_6	-	4672
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.48675	29	-	CZYG01	1685	4177	3892	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664039	GCA_900011375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/375/GCA_900011375.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.08587	45.2	-	MISL01	181	4836	4633	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN03358825	GCA_001727275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/275/GCA_001727275.1_ASM172727v1	-	GCSL_R144
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.99137	56.8	-	LGJJ01	9	6067	5776	7/17/15	2/21/17	Scaffold	Broad Institute	SAMN03280386	GCA_001185665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/665/GCA_001185665.1_Kleb_pneu_MGH83_V1	-	MGH83
Enterococcus faecalis	1351	PRJNA327106	327106	Terrabacteria group	Firmicutes	3.14203	37.1	-	MKXU01	105	-	-	12/22/16	12/22/16	Contig	None	SAMN05509316	GCA_001913975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/975/GCA_001913975.1_ASM191397v1	-	-
Enterococcus faecium	1352	PRJNA306168	306168	Terrabacteria group	Firmicutes	2.9944	38.1	-	LRBC01	205	3172	2925	2/1/16	3/27/17	Scaffold	brown University/Rhode Island Hospital	SAMN04414054	GCA_001543795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/795/GCA_001543795.1_ASM154379v1	-	D344RRF x C68
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.81341	67.9	-	CFXY01	329	3684	3303	3/15/15	3/27/17	Scaffold	SC	SAMEA751294	GCA_001332255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/255/GCA_001332255.1_5476_2_6	-	B256
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.748	31.2	-	FBNV01	35	1819	1689	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683428	GCA_001495315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/315/GCA_001495315.1_NCTC11353	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.20041	55.3	-	FKHS01	90	5186	4860	4/6/16	4/20/17	Scaffold	SC	SAMEA2273267	GCA_900078045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/045/GCA_900078045.1_11983_7_42	-	e917
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16039	64.1	-	FVXH01	22	5176	5070	3/10/17	3/18/17	Contig	SC	SAMEA2160370	GCA_900140925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/925/GCA_900140925.1_10702_1_55	-	645
Pseudomonas sp. UBA4102	1947316	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	5.12174	55.6	-	DFXS01	41	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452944	GCA_002383245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/245/GCA_002383245.1_ASM238324v1	28894102	-
Pseudomonas sp. UBA4034	1947315	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	5.42878	61	-	DGAI01	153	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455024	GCA_002383725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/725/GCA_002383725.1_ASM238372v1	28894102	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.77981	64.2	-	FSPW01	22	4722	4617	12/14/16	3/21/17	Contig	SC	SAMEA2149033	GCA_900141025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/025/GCA_900141025.1_10702_1_69	-	672
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.14703	55	-	FKHT01	48	5078	4846	4/6/16	3/28/17	Scaffold	SC	SAMEA2273268	GCA_900078055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/055/GCA_900078055.1_11983_7_44	-	e926
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66025	31.4	-	FBGU01	28	1716	1627	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683242	GCA_001495335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/335/GCA_001495335.1_EC3373	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.77614	67.8	-	CFXA01	616	3772	3192	3/15/15	3/26/17	Scaffold	SC	SAMEA751309	GCA_001332275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/275/GCA_001332275.1_5476_2_9	-	B262
Enterococcus faecium	1352	PRJNA306168	306168	Terrabacteria group	Firmicutes	2.9525	37.9	-	LRAQ01	180	3059	2884	2/1/16	3/27/17	Scaffold	brown University/Rhode Island Hospital	SAMN04347310	GCA_001543825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/825/GCA_001543825.1_ASM154382v1	-	C68
Enterococcus faecalis	1351	PRJNA278440	278440	Terrabacteria group	Firmicutes	3.26791	37	-	MVGQ01	185	3466	2921	2/23/17	2/23/17	Contig	University of Sao Paulo	SAMN06330386	GCA_002006035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/035/GCA_002006035.1_ASM200603v1	-	LIM690
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.87035	56.9	-	LGJK01	7	5978	5689	7/17/15	2/25/17	Scaffold	Broad Institute	SAMN03280380	GCA_001185675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/675/GCA_001185675.1_Kleb_pneu_CHS240_V1	-	CHS240
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.07494	45.2	-	MISM01	156	4807	4626	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368275	GCA_001727295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/295/GCA_001727295.1_ASM172729v1	-	GCSL_R145
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.20586	28.8	-	CZYH01	1264	3803	3639	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664040	GCA_900011385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/385/GCA_900011385.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.00946	47.4	-	CWNQ01	58	3805	3604	7/16/15	3/26/17	Scaffold	SC	SAMEA889312	GCA_001249995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/995/GCA_001249995.1_4056_6_2	-	A177
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08469	68.2	-	CSNM01	66	7315	6793	3/22/15	3/26/17	Scaffold	SC	SAMEA807023	GCA_001199695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/695/GCA_001199695.1_7910_5_2	-	C68
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.68683	50.7	-	CWYD01	372	5207	4489	7/16/15	2/24/17	Scaffold	SC	SAMEA2445706	GCA_001256395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/395/GCA_001256395.1_12971_8_25	-	H092740550
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.58651	38.2	-	FJFJ01	42	3321	3148	2/20/16	3/27/17	Scaffold	SC	SAMEA2250622	GCA_900062335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/335/GCA_900062335.1_11787_1_12	-	OLDA_1
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.15939	41	-	FIFJ01	54	2175	2014	2/10/16	3/19/17	Contig	SC	SAMEA1316619	GCA_900057485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/485/GCA_900057485.1_5749_1_5	-	LOLA-SS005
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.07713	35.5	-	MAMX01	43	2145	2027	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481582	GCA_001693955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/955/GCA_001693955.1_ASM169395v1	27411639	2274
Acinetobacter baumannii 655555	1310712	PRJNA194788	194788	Proteobacteria	Gammaproteobacteria	4.03991	38.9	-	JFEW01	197	4080	3754	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404537	GCA_000584235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/235/GCA_000584235.1_ASM58423v1	-	655555
Pseudomonas aeruginosa AH16	1208103	PRJNA170163	170163	Proteobacteria	Gammaproteobacteria	6.76533	66.1	-	ALJH01	130	6536	6266	8/15/12	5/19/17	Contig	Anhui University of Traditional Chinese Medicine	SAMN02393806	GCA_000287875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/875/GCA_000287875.1_AH16	23045492	AH16
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16271	51.5	-	FEXN01	86	2524	2167	2/9/16	3/21/17	Scaffold	SC	SAMEA2674430	GCA_900025615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/615/GCA_900025615.1_14324_5_93	-	2842STDY5881626
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.71246	38.9	-	MILM01	102	1688	1503	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569580	GCA_002026745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/745/GCA_002026745.1_MGms2_v1.0	28293542	MGms2
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.03719	39.7	-	CPPD01	67	2225	2024	3/22/15	3/11/17	Contig	SC	SAMEA1020605	GCA_001100045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/045/GCA_001100045.1_6187_6_7	-	LMG1425
Escherichia coli J96	1206108	PRJNA169903	169903	Proteobacteria	Gammaproteobacteria	5.54089	50.4	-	ALIN02	276	5820	5279	9/10/12	5/18/17	Scaffold	Princeton University	SAMN02356007	GCA_000295775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/775/GCA_000295775.2_ASM29577v2	23469357	J96
Mycobacterium tuberculosis XTB13-227	1427298	PRJNA229696	229696	Terrabacteria group	Actinobacteria	4.40048	65.6	-	JLIA01	5	4273	4096	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419654	GCA_000655795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/795/GCA_000655795.1_Myco_tube_XTB13-227_V1	-	XTB13-227
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.97552	37.8	-	CWNB01	175	3093	2933	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466615	GCA_001490875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/875/GCA_001490875.1_2012_195088_8	-	-
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.70372	30.5	-	CZHM01	93	1827	1692	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556532	GCA_001407415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/415/GCA_001407415.1_28_S27	-	Campylobacter jejuni
Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23	439846	PRJNA19461	19461	Proteobacteria	Gammaproteobacteria	4.72647	52.3	-	ABAM02	2	4742	4520	5/10/07	2/26/17	Contig	TIGR	SAMN02415271	GCA_000170215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/215/GCA_000170215.1_ASM17021v1	21602358	SARA23
Staphylococcus aureus M0395	1388524	PRJNA216697	216697	Terrabacteria group	Firmicutes	2.92279	33.2	-	JBAF01	9	3015	2854	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325648	GCA_000530035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/035/GCA_000530035.1_Stap_aure_M0395_V1	-	M0395
Staphylococcus aureus M0407	1388525	PRJNA216698	216698	Terrabacteria group	Firmicutes	2.81179	32.8	-	JBAE01	11	2940	2776	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325649	GCA_000530075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/075/GCA_000530075.1_Stap_aure_M0407_V1	-	M0407
Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29	439847	PRJNA19463	19463	Proteobacteria	Gammaproteobacteria	4.92896	52.2	-	ABAN01	182	5015	4704	5/10/07	5/19/17	Contig	TIGR	SAMN02415272	GCA_000170235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/235/GCA_000170235.1_ASM17023v1	21602358	SARA29
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.69516	30.5	-	CZHS01	192	1793	1674	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556542	GCA_001407435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/435/GCA_001407435.1_39_S37	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.0458	37.8	-	CWLD01	66	3152	3041	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466580	GCA_001491615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/615/GCA_001491615.1_2012_313587_15	-	-
Mycobacterium tuberculosis XTB13-228	1427299	PRJNA229697	229697	Terrabacteria group	Actinobacteria	4.4324	65.6	-	JLHZ01	5	4309	4103	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419655	GCA_000655815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/815/GCA_000655815.1_Myco_tube_XTB13-228_V1	-	XTB13-228
Escherichia coli 0.1304	1005441	PRJNA65695	65695	Proteobacteria	Gammaproteobacteria	5.36832	50.3	-	AMVK01	507	5805	5352	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00808720	GCA_000303235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/235/GCA_000303235.2_ASM30323v2	-	0.1304
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.01448	39.7	-	CLSS01	48	2204	1993	3/21/15	3/11/17	Contig	SC	SAMEA1028726	GCA_001100125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/125/GCA_001100125.1_6972_4_21	-	SMRU2613
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.66493	38.9	-	MILO01	89	1650	1477	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569582	GCA_002026755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/755/GCA_002026755.1_MGms23_v1.0	28293542	MGms23
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.21259	51.5	-	FEYI01	76	2588	2212	2/9/16	3/21/17	Scaffold	SC	SAMEA2674469	GCA_900025625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/625/GCA_900025625.1_14355_8_17	-	2842STDY5881742
Pseudomonas aeruginosa CIG1	1163397	PRJNA89681	89681	Proteobacteria	Gammaproteobacteria	6.53624	66	-	AKBD01	544	6419	5975	9/6/12	5/19/17	Contig	University of Washington	SAMN02471988	GCA_000295475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/475/GCA_000295475.1_PaCIG1.1	22988113	CIG1
Acinetobacter baumannii 480175	1310745	PRJNA194821	194821	Proteobacteria	Gammaproteobacteria	4.05665	39.1	-	JFEU01	82	3993	3727	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404535	GCA_000584275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/275/GCA_000584275.1_ASM58427v1	-	480175
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.17366	35.3	-	MANH01	36	2224	2118	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481594	GCA_001693965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/965/GCA_001693965.1_ASM169396v1	27411639	AB-46
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.0048	41.2	-	FINE01	26	2026	1909	2/10/16	3/19/17	Contig	SC	SAMEA1566051	GCA_900057505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/505/GCA_900057505.1_8337_6_28	-	BM345B
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.49479	38.3	-	FJGH01	27	3210	3095	2/20/16	3/27/17	Scaffold	SC	SAMEA2077525	GCA_900062405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/405/GCA_900062405.1_10625_2_10	-	2532STDY5467483
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.80232	50.6	-	CWZQ01	397	5374	4624	7/16/15	2/24/17	Scaffold	SC	SAMEA2445753	GCA_001256415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/415/GCA_001256415.1_12971_8_62	-	H132920407
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.12239	68.2	-	CSKN01	81	7344	6826	3/23/15	3/26/17	Scaffold	SC	SAMEA949311	GCA_001199735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/735/GCA_001199735.1_7915_5_3	-	DR13450/01
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.94605	47.5	-	CWQL01	62	3743	3546	7/16/15	3/26/17	Scaffold	SC	SAMEA889171	GCA_001250035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/035/GCA_001250035.1_4075_3_5	-	GP145
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.25012	28.8	-	CZYL01	1611	3873	3623	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664043	GCA_900011395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/395/GCA_900011395.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.06788	45.3	-	MISO01	152	4820	4598	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368276	GCA_001727305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/305/GCA_001727305.1_ASM172730v1	-	GCSL_R149
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.79412	57	-	LGJI01	11	5800	5631	7/17/15	9/2/16	Scaffold	Broad Institute	SAMN03280420	GCA_001185685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/685/GCA_001185685.1_Kleb_pneu_UCI69_V1	-	UCI69
Enterococcus faecalis	1351	PRJNA231221	231221	Terrabacteria group	Firmicutes	3.20149	37.2	-	NJFB01	2	3373	2565	6/23/17	6/23/17	Contig	US Food and Drug Administration 	SAMN06173335	GCA_002206445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/445/GCA_002206445.1_ASM220644v1	-	FDAARGOS_322
Enterococcus faecium	1352	PRJNA306168	306168	Terrabacteria group	Firmicutes	3.146	37.9	-	LRAR01	245	3339	3056	2/1/16	3/27/17	Scaffold	brown University/Rhode Island Hospital	SAMN04390118	GCA_001543835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/543/835/GCA_001543835.1_ASM154383v1	-	D344RRF x C68
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.83406	67.9	-	CGAC01	304	3688	3315	3/15/15	3/27/17	Scaffold	SC	SAMEA751314	GCA_001332295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/295/GCA_001332295.1_6062_2_6	-	B247
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.7048	31.2	-	FBPD01	32	1767	1648	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683459	GCA_001495375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/375/GCA_001495375.1_H043920292	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.71279	55.5	-	FKHR01	21	4571	4398	4/6/16	3/28/17	Scaffold	SC	SAMEA2273266	GCA_900078065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/065/GCA_900078065.1_11983_7_41	-	e915
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.06601	64	-	FVXL01	26	5167	5010	3/10/17	3/18/17	Contig	SC	SAMEA2163598	GCA_900141045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/045/GCA_900141045.1_10702_1_66	-	663
Pseudomonas sp. UBA4617	1947318	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	5.20455	63.1	-	DGIR01	57	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06457690	GCA_002386445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/445/GCA_002386445.1_ASM238644v1	28894102	-
Pseudomonas sp. 22 E 5	1844093	PRJEB9508	335877	Proteobacteria	Gammaproteobacteria	14.113	60.2	-	CVTW01	1213	7582	12881	7/29/16	7/29/16	Scaffold	"JOHN INNES CENTRE, NORWICH, UK."	SAMEA3442618	GCA_900004705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/004/705/GCA_900004705.1_PSEFL294_LIB5396	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.41862	64.2	-	FVXO01	60	5471	5295	3/10/17	3/18/17	Contig	SC	SAMEA2153482	GCA_900141055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/055/GCA_900141055.1_10702_1_7	-	573
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.9774	55	-	FKHU01	98	4858	4608	4/6/16	3/28/17	Scaffold	SC	SAMEA2273269	GCA_900078075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/075/GCA_900078075.1_11983_7_45	-	e929
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75083	31.1	-	FBIK01	27	1812	1694	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683287	GCA_001495395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/395/GCA_001495395.1_UNLL3.1	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.69697	67.6	-	CVJD01	941	3756	2996	4/2/15	3/27/17	Scaffold	SC	SAMEA751316	GCA_001332315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/315/GCA_001332315.1_6062_2_5	-	B289
Enterococcus faecium	1352	PRJNA306040	306040	Terrabacteria group	Firmicutes	2.98231	37.9	-	LOQQ01	207	3176	2923	3/8/16	3/27/17	Scaffold	Brown University/Rhode Island Hospital	SAMN04338419	GCA_001582095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/095/GCA_001582095.1_ASM158209v1	27151809	D344RRF
Enterococcus faecalis	1351	PRJNA390699	390699	Terrabacteria group	Firmicutes	3.1511	37.1	-	NIXL01	228	3358	2066	7/26/17	7/26/17	Contig	RAJIV GANDHI CENTRE FOR BIOTECHNOLOGY	SAMN07249099	GCA_002233665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/665/GCA_002233665.1_ASM223366v1	-	SK460
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.84803	57	-	LGJL01	10	5952	5677	7/17/15	2/25/17	Scaffold	Broad Institute	SAMN03280379	GCA_001185695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/695/GCA_001185695.1_Kleb_pneu_CHS239_V1	-	CHS239
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.0663	45.3	-	MISP01	149	4807	4596	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368277	GCA_001727345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/345/GCA_001727345.1_ASM172734v1	-	GCSL_R150
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.4029	28.8	-	CZYO01	263	4105	3963	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664050	GCA_900011415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/415/GCA_900011415.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.11266	47.5	-	CWNZ01	68	3863	3428	7/16/15	3/26/17	Scaffold	SC	SAMEA889230	GCA_001250195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/195/GCA_001250195.1_4056_2_10	-	MJ1485
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.09594	68.2	-	CSRV01	69	7317	6787	3/22/15	3/26/17	Scaffold	SC	SAMEA807011	GCA_001199815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/815/GCA_001199815.1_7907_5_28	-	C28
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.74955	50.7	-	CWWK01	399	5355	4483	7/16/15	2/24/17	Scaffold	SC	SAMEA3345103	GCA_001256435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/435/GCA_001256435.1_Sg_201405327_CTAGCT_L001	-	201405327_1
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.45324	38.3	-	FJHJ01	18	3155	3034	2/20/16	3/27/17	Scaffold	SC	SAMEA2077787	GCA_900062465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/465/GCA_900062465.1_10625_3_1	-	2532STDY5467570
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.10257	41.1	-	FIOZ01	20	2105	1995	2/10/16	3/19/17	Contig	SC	SAMEA1566117	GCA_900057515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/515/GCA_900057515.1_8337_6_75	-	EN507
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.15888	35.4	-	MAMY01	44	2214	2106	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481583	GCA_001693995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/995/GCA_001693995.1_ASM169399v1	27411639	5675
Acinetobacter baumannii 457946	1310740	PRJNA194816	194816	Proteobacteria	Gammaproteobacteria	4.19494	39.1	-	JFET01	91	4138	3860	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404534	GCA_000584295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/295/GCA_000584295.1_ASM58429v1	-	457946
Pseudomonas aeruginosa PAO579	1191475	PRJNA167046	167046	Proteobacteria	Gammaproteobacteria	6.01585	66.5	-	ALOF01	16	5739	5606	9/12/12	5/19/17	Contig	Marshall University School of Medicine	SAMN02470270	GCA_000296325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/325/GCA_000296325.1_PAO579-1.0	23144378	PAO579
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15013	51.6	-	FEYG01	87	2509	2148	2/9/16	3/21/17	Scaffold	SC	SAMEA2674459	GCA_900025635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/635/GCA_900025635.1_14355_8_12	-	2842STDY5881737
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.63886	38.9	-	MILQ01	77	1631	1473	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569584	GCA_002026785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/785/GCA_002026785.1_MM2004-20_v1.0	28293542	MM2004-20
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08918	39.6	-	CNSB02	158	2246	2024	3/23/15	3/11/17	Contig	SC	SAMEA1032468	GCA_001100245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/245/GCA_001100245.2_6999_2_7	-	R34-3213
Escherichia coli 0.1288	1005442	PRJNA65697	65697	Proteobacteria	Gammaproteobacteria	4.9456	50.6	-	AMVJ01	135	5108	4777	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00808719	GCA_000303255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/255/GCA_000303255.2_ASM30325v2	-	0.1288
Mycobacterium tuberculosis XTB13-229	1427300	PRJNA229698	229698	Terrabacteria group	Actinobacteria	4.42491	65.6	-	JLHY01	15	4322	4111	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419656	GCA_000655835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/835/GCA_000655835.1_Myco_tube_XTB13-229_V1	-	XTB13-229
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.06358	37.8	-	CWKX01	81	3179	3040	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466585	GCA_001492155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/155/GCA_001492155.1_2012_313587_6	-	-
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.7034	30.3	-	CZHQ01	81	1770	1624	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556549	GCA_001407455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/455/GCA_001407455.1_46_S44	-	Campylobacter jejuni
"Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701"	440534	PRJNA19465	19465	Proteobacteria	Gammaproteobacteria	4.89592	52.3	-	ABAO01	113	5047	4788	5/10/07	5/19/17	Contig	TIGR	SAMN02415273	GCA_000170255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/255/GCA_000170255.1_ASM17025v1	21602358	CVM23701
Staphylococcus aureus M0418	1388526	PRJNA216699	216699	Terrabacteria group	Firmicutes	2.83641	32.8	-	JBAD01	20	2959	2798	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325650	GCA_000530155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/155/GCA_000530155.1_Stap_aure_M0418_V1	-	M0418
Staphylococcus aureus M0432	1388527	PRJNA216700	216700	Terrabacteria group	Firmicutes	2.90982	32.9	-	JBAC01	27	3074	2902	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325651	GCA_000530185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/185/GCA_000530185.1_Stap_aure_M0432_V1	-	M0432
Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433	454167	PRJNA20049	20049	Proteobacteria	Gammaproteobacteria	4.54614	52.2	-	ABEH02	19	4588	4333	7/20/07	5/19/17	Contig	TIGR/J. Craig Venter Institute	SAMN02415242	GCA_000171255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/255/GCA_000171255.1_ASM17125v1	-	GA_MM04042433
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.83586	30.1	-	CZHW01	95	1958	1786	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556524	GCA_001407475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/475/GCA_001407475.1_21_S20	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.01158	37.9	-	CWLX01	153	3101	2975	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466549	GCA_001492475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/475/GCA_001492475.1_2012_156584_14	-	-
Mycobacterium tuberculosis XTB13-230	1427301	PRJNA229699	229699	Terrabacteria group	Actinobacteria	4.39169	65.6	-	JLHX01	7	4273	4107	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419657	GCA_000655855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/855/GCA_000655855.1_Myco_tube_XTB13-230_V1	-	XTB13-230
Escherichia coli FRIK523	1005482	PRJNA65777	65777	Proteobacteria	Gammaproteobacteria	5.46668	50.3	-	AMVI01	467	5953	5489	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00808722	GCA_000303275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/275/GCA_000303275.2_ASM30327v2	-	FRIK523
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07999	39.6	-	CNVZ02	151	2284	2074	3/23/15	3/5/17	Contig	SC	SAMEA1032587	GCA_001100345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/345/GCA_001100345.2_7001_1_13	-	R34-3090
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.74549	38.8	-	MILS01	85	1703	1520	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569586	GCA_002026805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/805/GCA_002026805.1_MM2006-103_v1.0	28293542	MM2006-103
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.19777	51.6	-	FEYL01	84	2556	2193	2/9/16	3/21/17	Scaffold	SC	SAMEA2674105	GCA_900025645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/645/GCA_900025645.1_14555_5_2	-	2842STDY5881343
Pseudomonas aeruginosa ATCC 14886	1163392	PRJNA89671	89671	Proteobacteria	Gammaproteobacteria	6.37803	66.4	-	AKZD01	211	6106	5835	9/17/12	5/19/17	Contig	University of Washington	SAMN02471996	GCA_000297275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/275/GCA_000297275.1_ASM29727v1	22988113	ATCC 14886
Acinetobacter baumannii 607805	1310719	PRJNA194795	194795	Proteobacteria	Gammaproteobacteria	4.09498	39	-	JFES01	107	4013	3772	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404536	GCA_000584315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/315/GCA_000584315.1_ASM58431v1	-	607805
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.02248	35.2	-	MAUU01	23	2077	1965	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481585	GCA_001694015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/015/GCA_001694015.1_ASM169401v1	27411639	351521
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.0566	41.1	-	FIQG01	19	2070	1960	2/10/16	3/19/17	Contig	SC	SAMEA1566162	GCA_900057525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/525/GCA_900057525.1_8525_5_45	-	SS46
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.44684	38.3	-	FJGK01	18	3154	3043	2/20/16	3/27/17	Scaffold	SC	SAMEA2077527	GCA_900063825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/825/GCA_900063825.1_10625_2_16	-	2532STDY5467489
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.94391	50.5	-	CWVK01	447	5605	4772	7/16/15	2/24/17	Scaffold	SC	SAMEA3345072	GCA_001256455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/455/GCA_001256455.1_Sg_201400526_ATCACG_L001	-	201400526_1
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.12386	68.2	-	CSKT01	79	7343	6827	3/23/15	3/26/17	Scaffold	SC	SAMEA949350	GCA_001199855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/855/GCA_001199855.1_7915_5_22	-	K1127 7244-293
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.9481	47.5	-	CWSH01	51	3752	3607	7/16/15	3/26/17	Scaffold	SC	SAMEA889328	GCA_001250235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/235/GCA_001250235.1_5174_7_8	-	A19
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.27202	29	-	CZYS01	1840	3849	3638	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664051	GCA_900011425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/425/GCA_900011425.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.14909	45.2	-	MISQ01	135	4948	4754	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368278	GCA_001727365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/365/GCA_001727365.1_ASM172736v1	-	CDC_K4556R
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.89907	56.9	-	LGJM01	15	6006	5712	7/17/15	2/25/17	Scaffold	Broad Institute	SAMN03280378	GCA_001185745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/745/GCA_001185745.1_Kleb_pneu_CHS238_V1	-	CHS238
Enterococcus faecalis	1351	PRJNA327106	327106	Terrabacteria group	Firmicutes	2.99442	37.2	-	MKXV01	41	-	-	12/22/16	12/22/16	Scaffold	None	SAMN05509325	GCA_001913995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/995/GCA_001913995.1_ASM191399v1	-	-
Enterococcus faecium	1352	PRJNA310617	310617	Terrabacteria group	Firmicutes	2.89766	37.8	-	LSYW01	160	3043	2822	3/15/16	3/28/17	Scaffold	University of Sao Paulo	SAMN04452878	GCA_001592725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/725/GCA_001592725.1_ASM159272v1	-	VRE16
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.78032	67.8	-	CFXH01	529	3757	3183	3/15/15	3/26/17	Scaffold	SC	SAMEA751318	GCA_001332335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/335/GCA_001332335.1_6062_2_8	-	B250
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.81176	31.1	-	FBQR01	24	1926	1830	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683499	GCA_001495415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/415/GCA_001495415.1_H092260570	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.14002	54.9	-	FKHY01	107	5131	4860	4/6/16	3/28/17	Scaffold	SC	SAMEA2273484	GCA_900078085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/085/GCA_900078085.1_12082_4_58	-	e939
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98631	64.2	-	FVXP01	36	5040	4879	3/10/17	3/18/17	Contig	SC	SAMEA2153012	GCA_900141085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/085/GCA_900141085.1_10702_1_71	-	677
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.91355	64.2	-	FVXQ01	15	4951	4812	3/10/17	3/18/17	Contig	SC	SAMEA2145116	GCA_900141135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/135/GCA_900141135.1_10702_1_74	-	681
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.96832	55.4	-	FKHV01	28	4846	4644	4/6/16	3/28/17	Scaffold	SC	SAMEA2273270	GCA_900078095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/095/GCA_900078095.1_11983_7_46	-	e950
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.70174	31.3	-	FBKB01	22	1781	1686	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683324	GCA_001495435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/435/GCA_001495435.1_p635D	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.64959	67.5	-	CVJI01	1114	3739	2916	4/2/15	3/26/17	Scaffold	SC	SAMEA751325	GCA_001332375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/375/GCA_001332375.1_6062_2_1	-	B305
Enterococcus faecium	1352	PRJNA264198	264198	Terrabacteria group	Firmicutes	2.62747	38	-	JTKR01	75	2704	2509	4/18/16	3/28/17	Scaffold	"Department of Technology, Metropolitan University College (Copenhagen, Denmark)"	SAMN03120290	GCA_001622975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/975/GCA_001622975.1_ASM162297v1	27199912	CICYT-205
Enterococcus faecalis	1351	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.34387	37.2	-	DBUD01	206	-	-	9/18/17	9/18/17	Scaffold	University of Queensland	SAMN06450792	GCA_002307795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/795/GCA_002307795.1_ASM230779v1	28894102	-
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.92376	56.9	-	LGJN01	9	6005	5721	7/17/15	2/25/17	Scaffold	Broad Institute	SAMN03280353	GCA_001185755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/755/GCA_001185755.1_Kleb_pneu_CHS212_V1	-	CHS212
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.07306	45.3	-	MIUR01	118	4829	4657	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368325	GCA_001727385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/385/GCA_001727385.1_ASM172738v1	-	CDC_K5433
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.13893	28.6	-	CZYR01	865	3697	3565	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664052	GCA_900011435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/435/GCA_900011435.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.9961	47.7	-	CWPE01	156	3774	3564	7/16/15	3/26/17	Scaffold	SC	SAMEA889369	GCA_001250435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/435/GCA_001250435.1_3002_8_4	-	4642
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08489	68.2	-	CSPL01	65	7307	6774	3/22/15	3/26/17	Scaffold	SC	SAMEA807056	GCA_001200615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/615/GCA_001200615.1_7907_5_1	-	C1
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.76098	50.8	-	CXKQ01	396	5248	4612	7/16/15	2/24/17	Scaffold	SC	SAMEA2003442	GCA_001256475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/475/GCA_001256475.1_8290_4_48	-	109114
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.71093	38.3	-	FJLE01	70	3403	3249	2/20/16	3/27/17	Scaffold	SC	SAMEA2077981	GCA_900063895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/895/GCA_900063895.1_10625_3_51	-	2532STDY5467620
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.19512	41.2	-	FIGQ01	58	2212	2081	2/10/16	3/19/17	Contig	SC	SAMEA1316519	GCA_900057675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/675/GCA_900057675.1_7114_5_39	-	LSS39
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.06709	35.3	-	MANB01	43	2125	2015	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481588	GCA_001694025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/025/GCA_001694025.1_ASM169402v1	27411639	AB-13
Acinetobacter baumannii 3390	1310710	PRJNA194786	194786	Proteobacteria	Gammaproteobacteria	3.98957	39	-	JFER01	62	3940	3719	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404533	GCA_000584335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/335/GCA_000584335.1_ASM58433v1	-	3390
Pseudomonas aeruginosa ATCC 25324	1163393	PRJNA89673	89673	Proteobacteria	Gammaproteobacteria	7.10392	65.9	-	AKZE01	1023	7031	6465	9/17/12	5/19/17	Contig	University of Washington	SAMN02471980	GCA_000297295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/295/GCA_000297295.1_ASM29729v1	22988113	ATCC 25324
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.14805	51.6	-	FEYP01	105	2504	2134	2/9/16	3/21/17	Scaffold	SC	SAMEA2674114	GCA_900025655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/655/GCA_900025655.1_14555_5_6	-	2842STDY5881347
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.74047	38.9	-	MILY01	169	1767	1556	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569592	GCA_002026825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/825/GCA_002026825.1_MU2004-2_v1.0	28293542	MU2004-2
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.03073	39.6	-	CNQP02	144	2212	2009	3/23/15	3/11/17	Contig	SC	SAMEA1032636	GCA_001100485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/485/GCA_001100485.2_6952_7_21	-	R34-3181
Escherichia coli NE098	1005486	PRJNA65837	65837	Proteobacteria	Gammaproteobacteria	5.32285	50.3	-	AMVH01	448	5694	5280	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00808718	GCA_000303295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/295/GCA_000303295.2_ASM30329v2	-	NE098
Mycobacterium tuberculosis XTB13-231	1427302	PRJNA229700	229700	Terrabacteria group	Actinobacteria	4.43766	65.6	-	JLHW01	7	4314	4104	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419658	GCA_000655875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/875/GCA_000655875.1_Myco_tube_XTB13-231_V1	-	XTB13-231
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.00397	37.9	-	CWMM01	277	3103	2930	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466597	GCA_001492715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/715/GCA_001492715.1_2013_103984	-	-
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.72988	30.4	-	CZIK01	94	1844	1722	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556506	GCA_001407495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/495/GCA_001407495.1_2_S2	-	Campylobacter jejuni
Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191	454231	PRJNA20069	20069	Proteobacteria	Gammaproteobacteria	4.69657	52.2	-	ABEI01	53	4683	4470	7/20/07	5/19/17	Contig	TIGR/J. Craig Venter Institute	SAMN02415243	GCA_000171275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/275/GCA_000171275.1_ASM17127v1	21602358	CDC 191
Staphylococcus aureus M0443	1388528	PRJNA216701	216701	Terrabacteria group	Firmicutes	2.76824	32.9	-	JBAB01	11	2897	2711	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325652	GCA_000530275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/275/GCA_000530275.1_Stap_aure_M0443_V1	-	M0443
Staphylococcus aureus M0456	1388529	PRJNA216702	216702	Terrabacteria group	Firmicutes	2.894	32.9	-	JBAA01	10	3028	2862	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325653	GCA_000530315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/315/GCA_000530315.1_Stap_aure_M0456_V1	-	M0456
Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480	454165	PRJNA20071	20071	Proteobacteria	Gammaproteobacteria	4.76158	52.2	-	ABEJ01	67	4864	4617	7/20/07	5/19/17	Contig	TIGR/J. Craig Venter Institute	SAMN02415244	GCA_000171295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/295/GCA_000171295.1_ASM17129v1	21602358	SL480
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.66377	30.4	-	CZJF01	32	1756	1635	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556562	GCA_001407515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/515/GCA_001407515.1_60_S58	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.02508	37.7	-	CWLB01	143	3103	2967	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466558	GCA_001492755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/755/GCA_001492755.1_2011_172904_16d	-	-
Mycobacterium tuberculosis XTB13-232	1427303	PRJNA229701	229701	Terrabacteria group	Actinobacteria	4.44827	65.5	-	JLHV01	20	4330	4119	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419659	GCA_000655895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/895/GCA_000655895.1_Myco_tube_XTB13-232_V1	-	XTB13-232
Escherichia coli EC1870	1005554	PRJNA65977	65977	Proteobacteria	Gammaproteobacteria	5.45749	50.2	-	AMVG01	465	5944	5458	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00808717	GCA_000303315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/315/GCA_000303315.2_ASM30331v2	-	EC1870
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12542	39.6	-	CNYE02	256	2334	2118	3/23/15	3/5/17	Contig	SC	SAMEA1463252	GCA_001100585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/585/GCA_001100585.2_7553_4_29	-	NP7006
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.69821	38.9	-	MIKS01	89	1706	1522	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569560	GCA_002026835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/835/GCA_002026835.1_MC2006-52_v1.0	28293542	MC2006-52
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15202	51.6	-	FEZH01	82	2504	2144	2/9/16	3/21/17	Scaffold	SC	SAMEA2674175	GCA_900025665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/665/GCA_900025665.1_14555_5_25	-	2842STDY5881366
Pseudomonas aeruginosa ATCC 700888	1163394	PRJNA89675	89675	Proteobacteria	Gammaproteobacteria	6.7948	66.1	-	AKZF01	600	6729	6277	9/17/12	5/19/17	Contig	University of Washington	SAMN02471986	GCA_000297315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/315/GCA_000297315.1_ASM29731v1	22988113	ATCC 700888
Acinetobacter baumannii 318814	1310707	PRJNA194783	194783	Proteobacteria	Gammaproteobacteria	4.12551	39	-	JFEQ01	41	3929	3713	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404532	GCA_000584355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/355/GCA_000584355.1_ASM58435v1	-	318814
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.24103	35.3	-	MAND01	55	2290	2180	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481590	GCA_001694045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/045/GCA_001694045.1_ASM169404v1	27411639	AB-22
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.06738	41.1	-	FIQD01	24	2085	1968	2/10/16	3/19/17	Contig	SC	SAMEA1566038	GCA_900057685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/685/GCA_900057685.1_8525_5_41	-	SS37
Legionella pneumophila	446	PRJEB4355	226663	Proteobacteria	Gammaproteobacteria	3.38958	38.2	-	FJGJ01	23	3103	2998	2/20/16	3/27/17	Scaffold	SC	SAMEA1966284	GCA_900064195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/195/GCA_900064195.1_10625_2_48	-	2532STDY5467521
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.97967	50.5	-	CWXI01	513	5858	4796	7/16/15	2/24/17	Scaffold	SC	SAMEA2434383	GCA_001256495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/495/GCA_001256495.1_12844_1_56	-	11049313
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.12607	68.2	-	CSLC01	90	7387	6871	3/23/15	3/26/17	Scaffold	SC	SAMEA949325	GCA_001200935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/935/GCA_001200935.1_7915_5_16	-	504/96
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.00226	47.4	-	CWNM01	50	3821	3663	7/16/15	3/26/17	Scaffold	SC	SAMEA889159	GCA_001250455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/455/GCA_001250455.1_5174_8_3	-	A32
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.15584	28.9	-	FANA01	1555	3792	3545	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664423	GCA_900011515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/515/GCA_900011515.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.27231	45.2	-	MIUH01	294	5118	4791	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368318	GCA_001727395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/395/GCA_001727395.1_ASM172739v1	-	CDC_K5324G
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.89583	56.9	-	LGJO01	7	6017	5717	7/17/15	2/25/17	Scaffold	Broad Institute	SAMN03280339	GCA_001185765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/765/GCA_001185765.1_Kleb_pneu_CHS198_V1	-	CHS198
Enterococcus faecalis	1351	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.74268	37.6	-	DCRD01	50	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456427	GCA_002324945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/945/GCA_002324945.1_ASM232494v1	28894102	-
Enterococcus faecium	1352	PRJNA321783	321783	Terrabacteria group	Firmicutes	2.98473	37.9	-	LXWZ01	272	3097	2887	6/27/16	3/28/17	Scaffold	Zhejiang University	SAMN05003824	GCA_001676845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/845/GCA_001676845.1_ASM167684v1	-	XH877
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.66215	67.5	-	CFYM01	1113	3774	2903	3/15/15	3/27/17	Scaffold	SC	SAMEA751332	GCA_001332435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/435/GCA_001332435.1_6062_2_10	-	B251
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66071	31.4	-	FBCL01	21	1720	1625	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683129	GCA_001495475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/475/GCA_001495475.1_EC3611	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.02612	54.8	-	FKHW01	50	4960	4696	4/6/16	3/28/17	Scaffold	SC	SAMEA2273271	GCA_900078105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/105/GCA_900078105.1_11983_7_47	-	e953
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.19027	64.3	-	FWDC01	25	5190	5045	3/16/17	3/24/17	Contig	SC	SAMEA2144043	GCA_900141145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/145/GCA_900141145.1_10702_1_78	-	690
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.92357	64.2	-	FSQC01	34	4903	4782	12/14/16	3/21/17	Contig	SC	SAMEA2154625	GCA_900141175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/175/GCA_900141175.1_10702_1_8	-	574
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.76835	55.5	-	FKHX01	53	4647	4395	4/6/16	3/28/17	Scaffold	SC	SAMEA2273272	GCA_900078115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/115/GCA_900078115.1_11983_7_48	-	e965
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.87055	30.9	-	FBQU01	79	1963	1839	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683502	GCA_001495515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/515/GCA_001495515.1_H063800423	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.80954	67.8	-	CGHL01	501	3767	3244	3/15/15	3/27/17	Scaffold	SC	SAMEA751334	GCA_001332455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/455/GCA_001332455.1_6062_2_9	-	B249
Enterococcus faecium	1352	PRJNA245745	245745	Terrabacteria group	Firmicutes	2.80435	38.1	-	JMIN01	41	2800	2629	7/28/16	3/28/17	Scaffold	"Harvard Medical School, Massachusetts Eye and Ear Infirmary"	SAMN02739346	GCA_001696275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/275/GCA_001696275.1_UCN73.1	-	UCN73
Enterococcus faecalis	1351	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.73851	37.3	-	DGLK01	85	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06451166	GCA_002387925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/925/GCA_002387925.1_ASM238792v1	28894102	-
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.70645	57.1	-	LGJP01	5	5727	5564	7/17/15	6/18/16	Scaffold	Broad Institute	SAMN03280337	GCA_001185775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/775/GCA_001185775.1_Kleb_pneu_CHS196_V1	-	CHS196
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.06013	45.4	-	MIUI01	174	4816	4597	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368319	GCA_001727405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/405/GCA_001727405.1_ASM172740v1	-	CDC_K5324W
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.48214	29	-	FACA01	1133	4224	4007	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664140	GCA_900011645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/645/GCA_900011645.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.01788	47.5	-	CWOA01	67	3782	3550	7/16/15	3/26/17	Scaffold	SC	SAMEA889229	GCA_001250615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/615/GCA_001250615.1_4056_2_7	-	A488(2)
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.05198	68.2	-	CSLD01	54	7215	6737	3/23/15	3/26/17	Scaffold	SC	SAMEA949421	GCA_001202135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/135/GCA_001202135.1_7910_7_11	-	P166/04
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.33875	50.9	-	CXNR01	383	4650	4128	7/16/15	2/24/17	Scaffold	SC	SAMEA954676	GCA_001256515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/515/GCA_001256515.1_5236_7_3	-	Sh273_441040
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.5351	38.3	-	FJOC01	74	3231	3072	3/4/16	3/27/17	Scaffold	SC	SAMEA1487522	GCA_900073005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/005/GCA_900073005.1_93355_H034700617_1	-	LP_617
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.0583	41.1	-	FIQB01	22	2076	1964	2/10/16	3/19/17	Contig	SC	SAMEA1566016	GCA_900057695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/695/GCA_900057695.1_8525_5_42	-	SS38
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.10548	35.4	-	MANF01	65	2169	2040	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481592	GCA_001694075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/075/GCA_001694075.1_ASM169407v1	27411639	AB-35
Acinetobacter baumannii 2887	1310754	PRJNA194830	194830	Proteobacteria	Gammaproteobacteria	4.13079	39.2	-	JFEP01	119	4108	3827	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404531	GCA_000584395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/395/GCA_000584395.1_ASM58439v1	-	2887
Pseudomonas aeruginosa CI27	1163396	PRJNA89679	89679	Proteobacteria	Gammaproteobacteria	6.77272	66	-	AKZG01	160	6530	6313	9/17/12	5/19/17	Contig	University of Washington	SAMN02471979	GCA_000297335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/335/GCA_000297335.1_ASM29733v1	22988113	CI27
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15817	51.5	-	FFAI01	98	2516	2142	2/9/16	3/21/17	Scaffold	SC	SAMEA2674244	GCA_900025675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/675/GCA_900025675.1_14555_5_52	-	2842STDY5881393
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.66654	38.9	-	MILW01	60	1639	1461	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569590	GCA_002026865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/865/GCA_002026865.1_MM2012-26_v1.0	28293542	MM2012-26
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04838	39.7	-	CKJK01	52	2252	2040	3/21/15	3/4/17	Contig	SC	SAMEA1023960	GCA_001100685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/685/GCA_001100685.1_6631_5_18	-	34
Escherichia coli EC1869	1005553	PRJNA65975	65975	Proteobacteria	Gammaproteobacteria	5.40512	50.3	-	AMVF01	410	5875	5380	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00808716	GCA_000303335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/335/GCA_000303335.2_ASM30333v2	-	EC1869
Mycobacterium tuberculosis XTB13-233	1427304	PRJNA229702	229702	Terrabacteria group	Actinobacteria	4.39289	65.6	-	JLHU01	5	4271	4101	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419660	GCA_000655915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/915/GCA_000655915.1_Myco_tube_XTB13-233_V1	-	XTB13-233
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.02458	37.9	-	CWME01	117	3121	2990	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466553	GCA_001492855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/855/GCA_001492855.1_2011_168401_11	-	-
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.63421	30.5	-	CZHK01	47	1716	1581	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556538	GCA_001407535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/535/GCA_001407535.1_34_S33	-	Campylobacter jejuni
Salmonella enterica subsp. enterica serovar Heidelberg str. SL486	454164	PRJNA20065	20065	Proteobacteria	Gammaproteobacteria	4.72823	52.1	-	ABEL01	48	4804	4593	7/20/07	5/19/17	Contig	TIGR/JCVI	SAMN02415245	GCA_000171315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/315/GCA_000171315.1_ASM17131v1	21602358	SL486
Staphylococcus aureus M0473	1388530	PRJNA216703	216703	Terrabacteria group	Firmicutes	2.82314	32.9	-	JAZZ01	5	2925	2765	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325654	GCA_000530395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/395/GCA_000530395.1_Stap_aure_M0473_V1	-	M0473
Staphylococcus aureus M0492	1388531	PRJNA216704	216704	Terrabacteria group	Firmicutes	2.87304	32.8	-	JAZY01	21	3023	2863	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325655	GCA_000530445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/445/GCA_000530445.1_Stap_aure_M0492_V1	-	M0492
Salmonella enterica subsp. enterica serovar Newport str. SL317	454168	PRJNA20047	20047	Proteobacteria	Gammaproteobacteria	4.94801	52.1	-	ABEW01	63	5074	4831	8/15/07	5/19/17	Contig	TIGR/J. Craig Venter Institute	SAMN02415246	GCA_000171415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/415/GCA_000171415.1_ASM17141v1	21602358	SL317
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.6853	30.4	-	CZJO01	47	1776	1654	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556568	GCA_001407555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/555/GCA_001407555.1_66_S64	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.00163	37.9	-	CWNG01	399	3169	2928	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466620	GCA_001492915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/915/GCA_001492915.1_2013_80648	-	-
Mycobacterium tuberculosis XTB13-234	1427305	PRJNA229703	229703	Terrabacteria group	Actinobacteria	4.39566	65.5	-	JLHT01	7	4283	4103	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419661	GCA_000655935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/935/GCA_000655935.1_Myco_tube_XTB13-234_V1	-	XTB13-234
Escherichia coli EC1868	1005552	PRJNA65973	65973	Proteobacteria	Gammaproteobacteria	5.46858	50.3	-	AMVE01	417	5979	5481	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00808714	GCA_000303355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/355/GCA_000303355.2_ASM30335v2	-	EC1868
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.0573	39.6	-	CKRK01	32	2239	1995	3/21/15	3/15/17	Contig	SC	SAMEA1024027	GCA_001100785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/785/GCA_001100785.1_6680_8_10	-	SMRU202
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.67687	38.9	-	MIKV01	63	1673	1504	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569563	GCA_002026885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/885/GCA_002026885.1_MCms1055_v1.0	28293542	MCms1055
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.10687	51.8	-	FFAV01	85	2456	2110	2/9/16	3/21/17	Scaffold	SC	SAMEA2674270	GCA_900025685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/685/GCA_900025685.1_14555_5_65	-	2842STDY5881406
Pseudomonas aeruginosa E2	1163395	PRJNA89677	89677	Proteobacteria	Gammaproteobacteria	6.35733	66.4	-	AKZH01	196	6012	5822	9/17/12	5/19/17	Contig	University of Washington	SAMN02471987	GCA_000297355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/355/GCA_000297355.1_ASM29735v1	22988113	E2
Acinetobacter baumannii 1412924	1310706	PRJNA194782	194782	Proteobacteria	Gammaproteobacteria	3.8221	39.1	-	JFEF01	63	3613	3434	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404495	GCA_000584415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/415/GCA_000584415.1_ASM58441v1	-	1412924
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.20866	35.3	-	MANG01	44	2269	2159	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481593	GCA_001694095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/095/GCA_001694095.1_ASM169409v1	27411639	AB-42
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.0528	41.2	-	FIQK01	22	2060	1943	2/10/16	3/19/17	Contig	SC	SAMEA1566196	GCA_900057705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/705/GCA_900057705.1_8525_5_50	-	SS69
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.44649	38.3	-	FJNY01	17	3158	3045	3/4/16	3/27/17	Scaffold	SC	SAMEA3861633	GCA_900073025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/025/GCA_900073025.1_36338_H034980467-1	-	-
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.674	50.8	-	CXCM01	634	4942	4260	7/16/15	2/24/17	Scaffold	SC	SAMEA954855	GCA_001256555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/555/GCA_001256555.1_5236_1_6	-	ShIB716_440732
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.09815	68.2	-	CSLS01	62	7324	6789	3/22/15	3/26/17	Scaffold	SC	SAMEA807009	GCA_001202415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/415/GCA_001202415.1_7909_4_15	-	C48
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.01969	47.5	-	CWNW01	64	3797	3629	7/17/15	3/26/17	Scaffold	SC	SAMEA889362	GCA_001250795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/795/GCA_001250795.1_4056_2_2	-	MBN17
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.21341	28.8	-	FACP01	1585	3812	3588	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664150	GCA_900011655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/655/GCA_900011655.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.20745	45.2	-	MIUG01	84	4985	4811	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368317	GCA_001727415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/415/GCA_001727415.1_ASM172741v1	-	CDC_K5323W
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.7622	56.8	-	LGJQ01	7	5860	5574	7/17/15	2/25/17	Scaffold	Broad Institute	SAMN03280328	GCA_001185825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/825/GCA_001185825.1_Kleb_pneu_CHS187_V1	-	CHS187
Enterococcus faecalis	1351	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.75804	37.4	-	DGRG01	30	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452121	GCA_002390985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/390/985/GCA_002390985.1_ASM239098v1	28894102	-
Enterococcus faecium	1352	PRJNA245745	245745	Terrabacteria group	Firmicutes	2.65196	38.2	-	JMII01	62	2636	2486	7/28/16	3/28/17	Scaffold	"Harvard Medical School, Massachusetts Eye and Ear Infirmary"	SAMN02739347	GCA_001696285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/285/GCA_001696285.1_BM4107.1	-	BM4107
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.75987	67.7	-	CHLC01	848	3789	3098	4/21/15	3/26/17	Scaffold	SC	SAMEA751343	GCA_001332475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/475/GCA_001332475.1_5476_2_5	-	B258
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.58558	31.7	-	FBNQ01	29	1592	1528	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683413	GCA_001495535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/535/GCA_001495535.1_H073220518	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.81396	55.1	-	FKIA01	39	4695	4463	4/6/16	3/28/17	Scaffold	SC	SAMEA2273273	GCA_900078125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/125/GCA_900078125.1_11983_7_49	-	e967
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.75415	64.2	-	FVXY01	18	4696	4588	3/10/17	3/18/17	Contig	SC	SAMEA2146751	GCA_900141285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/285/GCA_900141285.1_10702_1_9	-	576
Mycobacterium abscessus V06705	1353275	PRJNA210160	210160	Terrabacteria group	Actinobacteria	5.26872	64	-	AUMY01	90	5290	5125	8/2/13	3/15/17	Scaffold	Universite Pierre et Marie CURIE	SAMN02222088	GCA_000443145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/145/GCA_000443145.1_V06705	24009121	V06705
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.81492	55.1	-	FKHZ01	41	4703	4469	4/6/16	3/28/17	Scaffold	SC	SAMEA2273275	GCA_900078135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/135/GCA_900078135.1_11983_7_51	-	e970
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65911	31.4	-	FBNX01	23	1719	1625	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683449	GCA_001495555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/555/GCA_001495555.1_H092260569a	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.71046	67.7	-	CHFL01	765	3733	3051	4/21/15	3/26/17	Scaffold	SC	SAMEA751354	GCA_001332495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/495/GCA_001332495.1_5476_2_12	-	B246
Enterococcus faecium	1352	PRJNA357096	357096	Terrabacteria group	Firmicutes	2.56418	38.1	-	MRYG01	112	2658	2422	2/8/17	3/29/17	Scaffold	Universidad Andres Bello	SAMN06133058	GCA_001990565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/565/GCA_001990565.1_ASM199056v1	-	97-6_S5
Enterococcus faecalis	1351	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.64108	37.6	-	DHAF01	25	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450665	GCA_002398665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/398/665/GCA_002398665.1_ASM239866v1	28894102	-
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.92586	56.9	-	LGJR01	9	6011	5726	7/17/15	2/25/17	Scaffold	Broad Institute	SAMN03280319	GCA_001185835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/835/GCA_001185835.1_Kleb_pneu_CHS178_V1	-	CHS178
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.16847	45.2	-	MIUS01	105	4892	4742	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368326	GCA_001727465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/465/GCA_001727465.1_ASM172746v1	-	CDC_K5435
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.22123	28.9	-	FADR01	1146	3811	3631	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664183	GCA_900011675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/675/GCA_900011675.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.9663	47.6	-	CWOS01	99	3772	3318	7/16/15	3/26/17	Scaffold	SC	SAMEA889386	GCA_001250935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/935/GCA_001250935.1_4056_5_3	-	A61
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.12463	68.2	-	CSLK01	81	7363	6874	3/23/15	3/26/17	Scaffold	SC	SAMEA949444	GCA_001202895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/895/GCA_001202895.1_7910_7_14	-	P171/04
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.83156	50.4	-	CWXX01	437	5463	4620	7/16/15	2/24/17	Scaffold	SC	SAMEA2445692	GCA_001256615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/615/GCA_001256615.1_12971_8_13	-	H082240398
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.47366	38.3	-	FJOA01	31	3182	3039	3/4/16	3/27/17	Scaffold	SC	SAMEA3861634	GCA_900073035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/035/GCA_900073035.1_36396_NCTC_11191	-	-
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.06955	41.1	-	FIRK01	23	2066	1970	2/10/16	3/19/17	Contig	SC	SAMEA1566092	GCA_900057715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/715/GCA_900057715.1_8525_5_75	-	VS3537
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.19225	35.4	-	MAVW01	61	2254	2129	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481595	GCA_001694115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/115/GCA_001694115.1_ASM169411v1	27411639	AB-47
Acinetobacter baumannii 1296252	1310753	PRJNA194829	194829	Proteobacteria	Gammaproteobacteria	4.06766	39	-	JFFU01	139	4070	3732	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404494	GCA_000584435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/435/GCA_000584435.1_ASM58443v1	-	1296252
Pseudomonas aeruginosa 18A	1286151	PRJEB1335	189459	Proteobacteria	Gammaproteobacteria	6.09359	66.4	-	CAQZ01	179	5894	5596	2/12/13	5/19/17	Contig	UNSW	SAMEA2272507	GCA_000341565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/565/GCA_000341565.1_ASM34156v1	-	18A
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.13511	51.7	-	FFBE01	77	2499	2141	2/9/16	3/19/17	Scaffold	SC	SAMEA2674288	GCA_900025695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/695/GCA_900025695.1_14555_5_74	-	2842STDY5881415
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.69206	39	-	MIKW01	72	1654	1458	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569564	GCA_002026895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/895/GCA_002026895.1_MCms1063_v1.0	28293542	MCms1063
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05542	39.6	-	COFL02	120	2253	2035	3/23/15	3/11/17	Contig	SC	SAMEA1463013	GCA_001100865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/865/GCA_001100865.2_7622_5_85	-	ND6051
Escherichia coli EC1866	1005551	PRJNA65971	65971	Proteobacteria	Gammaproteobacteria	5.40243	50.2	-	AMVD01	394	5863	5394	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00808715	GCA_000303375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/375/GCA_000303375.2_ASM30337v2	-	EC1866
Mycobacterium tuberculosis XTB13-235	1427306	PRJNA229704	229704	Terrabacteria group	Actinobacteria	4.41726	65.6	-	JLHS01	13	4300	4096	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419662	GCA_000655955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/955/GCA_000655955.1_Myco_tube_XTB13-235_V1	-	XTB13-235
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.9554	37.8	-	CWMY01	328	3019	2855	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466609	GCA_001492955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/492/955/GCA_001492955.1_2014_82197_1	-	-
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.587	30.6	-	CZJC01	39	1663	1509	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556556	GCA_001407575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/575/GCA_001407575.1_54_S52	-	Campylobacter jejuni
Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537	465518	PRJNA20591	20591	Proteobacteria	Gammaproteobacteria	5.04746	52.2	-	ABFF01	81	5149	4855	8/31/07	5/19/17	Contig	TIGR/JCVI	SAMN02415247	GCA_000171495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/495/GCA_000171495.1_ASM17149v1	21602358	HI_N05-537
Staphylococcus aureus M0243	1388532	PRJNA216705	216705	Terrabacteria group	Firmicutes	2.83869	32.9	-	JAZX01	16	2968	2807	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325656	GCA_000530515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/515/GCA_000530515.1_Stap_aure_M0243_V1	-	M0243
Staphylococcus aureus M0253	1388533	PRJNA216706	216706	Terrabacteria group	Firmicutes	2.83424	32.8	-	JAZW01	16	2962	2808	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02325657	GCA_000530545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/545/GCA_000530545.1_Stap_aure_M0253_V1	-	M0253
Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066	465516	PRJNA20593	20593	Proteobacteria	Gammaproteobacteria	4.79333	52.3	-	ABFG01	50	4868	4572	8/31/07	5/19/17	Contig	TIGR/JCVI	SAMN02415248	GCA_000171515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/515/GCA_000171515.1_ASM17151v1	21602358	RI_05P066
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.64726	30.4	-	CZIU01	60	1721	1583	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556544	GCA_001407595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/595/GCA_001407595.1_41_S39	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.93939	37.9	-	CWMN01	287	3052	2871	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466599	GCA_001493035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/035/GCA_001493035.1_2014_60519	-	-
Mycobacterium tuberculosis XTB13-237	1427307	PRJNA229705	229705	Terrabacteria group	Actinobacteria	4.39481	65.6	-	JLHR01	2	4263	4094	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419663	GCA_000655975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/975/GCA_000655975.1_Myco_tube_XTB13-237_V1	-	XTB13-237
Escherichia coli EC1865	1005550	PRJNA65969	65969	Proteobacteria	Gammaproteobacteria	5.6037	50.5	-	AMVC01	648	6249	5666	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00808713	GCA_000303395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/395/GCA_000303395.2_ASM30339v2	-	EC1865
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.23837	39.4	-	CMGO01	78	2466	2210	3/23/15	3/4/17	Contig	SC	SAMEA1029357	GCA_001100885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/885/GCA_001100885.1_7038_4_22	-	SMRU2950
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.66194	39	-	MIKY01	92	1631	1462	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569566	GCA_002026925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/925/GCA_002026925.1_MCms1080_v1.0	28293542	MCms1080
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11608	51.8	-	FFBD01	96	2483	2160	2/9/16	3/19/17	Scaffold	SC	SAMEA2674286	GCA_900025705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/705/GCA_900025705.1_14555_5_73	-	2842STDY5881414
Pseudomonas aeruginosa PA21_ST175	1285581	PRJNA186902	186902	Proteobacteria	Gammaproteobacteria	6.88849	66.1	-	AOIH01	90	6646	6474	2/27/13	5/19/17	Contig	Hospital Universitario 12 de Octubre	SAMN01911283	GCA_000342145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/342/145/GCA_000342145.1_PA_21_ST175v1	23580706	PA21_ST175
Acinetobacter baumannii 1293320	1310752	PRJNA194828	194828	Proteobacteria	Gammaproteobacteria	4.00114	39.1	-	JFEE01	51	3849	3624	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404493	GCA_000584455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/455/GCA_000584455.1_ASM58445v1	-	1293320
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.17409	35.3	-	MAVX01	40	2217	2107	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481596	GCA_001694125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/125/GCA_001694125.1_ASM169412v1	27411639	AB-48
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04644	41.1	-	FITI01	26	2067	1938	2/10/16	3/19/17	Contig	SC	SAMEA1566105	GCA_900057725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/725/GCA_900057725.1_8525_5_15	-	FX527_2
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.44692	38.5	-	FJOB01	30	3175	3010	3/4/16	3/27/17	Scaffold	SC	SAMEA3861631	GCA_900073045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/045/GCA_900073045.1_60025_H034680033-2	-	-
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.57823	50.8	-	CXDB01	397	4848	4304	7/16/15	2/24/17	Scaffold	SC	SAMEA954713	GCA_001256715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/715/GCA_001256715.1_5236_6_3	-	Sh1460_440931
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.13309	68.2	-	CSKB01	60	7361	6859	3/22/15	3/26/17	Scaffold	SC	SAMEA1483603	GCA_001203375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/375/GCA_001203375.1_7910_5_7	-	56
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.03086	47.5	-	CWRG01	74	3821	3675	7/16/15	3/26/17	Scaffold	SC	SAMEA889227	GCA_001251435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/435/GCA_001251435.1_4370_3_6	-	7687
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.26196	29.4	-	FAMH01	356	3932	3774	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664405	GCA_900011695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/695/GCA_900011695.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.22053	45.2	-	MIUF01	98	4999	4820	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368316	GCA_001727475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/475/GCA_001727475.1_ASM172747v1	-	CDC_K5323G
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.86191	56.7	-	LGJS01	16	5763	5552	7/17/15	9/2/16	Scaffold	Broad Institute	SAMN03280316	GCA_001185865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/865/GCA_001185865.1_Kleb_pneu_CHS175_V1	-	CHS175
Enterococcus faecium	1352	PRJNA357096	357096	Terrabacteria group	Firmicutes	2.71874	37.9	-	MRYE01	140	2831	2589	2/8/17	3/29/17	Scaffold	Universidad Andres Bello	SAMN06133056	GCA_001990575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/575/GCA_001990575.1_ASM199057v1	-	97-19_S17
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.75532	67.7	-	CFYI01	768	3773	3119	3/15/15	3/27/17	Scaffold	SC	SAMEA751357	GCA_001332515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/515/GCA_001332515.1_5476_2_11	-	B255
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65987	31.4	-	FBAB01	20	1720	1628	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683067	GCA_001495575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/575/GCA_001495575.1_EC3400	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.87101	55.4	-	FKIC01	57	4822	4572	4/6/16	3/28/17	Scaffold	SC	SAMEA2273278	GCA_900078145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/145/GCA_900078145.1_11983_7_54	-	e978
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.25156	64.1	-	CSTP01	18	5300	5177	3/24/15	3/18/17	Scaffold	SC	SAMEA1464951	GCA_001212845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/845/GCA_001212845.1_7396_6_50	-	PAP002
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18571	64.2	-	CSUN01	41	5191	5038	3/24/15	3/18/17	Scaffold	SC	SAMEA1464911	GCA_001212865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/865/GCA_001212865.1_7396_6_77	-	PAP029
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.79665	55.5	-	FKID01	49	4692	4451	4/6/16	3/28/17	Scaffold	SC	SAMEA2273279	GCA_900078155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/155/GCA_900078155.1_11983_7_55	-	e985
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.77702	31.2	-	FBEE01	45	1872	1762	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683168	GCA_001495595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/595/GCA_001495595.1_SS_2318	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.84682	67.9	-	CFXS01	327	3714	3335	3/15/15	3/26/17	Scaffold	SC	SAMEA751360	GCA_001332535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/535/GCA_001332535.1_5633_3_6	-	B175
Enterococcus faecium	1352	PRJNA357096	357096	Terrabacteria group	Firmicutes	2.93775	37.7	-	MRYF01	204	3059	2817	2/8/17	3/29/17	Scaffold	Universidad Andres Bello	SAMN06133057	GCA_001990605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/605/GCA_001990605.1_ASM199060v1	-	97-3_S3
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.69863	57	-	LGJT01	5	5709	5549	7/17/15	6/19/16	Scaffold	Broad Institute	SAMN03280312	GCA_001185895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/895/GCA_001185895.1_Kleb_pneu_CHS171_V1	-	CHS171
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.09519	45.3	-	MIUE01	142	4840	4681	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368315	GCA_001727485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/485/GCA_001727485.1_ASM172748v1	-	CDC_K5308
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.24009	28.5	-	FAMK01	902	3879	3745	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664406	GCA_900011705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/705/GCA_900011705.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.9686	47.5	-	CWQE01	62	3795	3553	7/16/15	3/26/17	Scaffold	SC	SAMEA889202	GCA_001251495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/495/GCA_001251495.1_4075_3_1	-	GP16
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.00308	68.3	-	CSKK01	82	7221	6736	3/22/15	3/26/17	Scaffold	SC	SAMEA949321	GCA_001203735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/735/GCA_001203735.1_7915_5_8	-	DB61901/00
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.4855	50.8	-	CWTY01	383	5097	4226	7/16/15	2/24/17	Scaffold	SC	SAMEA3345053	GCA_001256735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/735/GCA_001256735.1_H14132054001	-	54001ss_1
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.44633	38.3	-	FJNZ01	20	3159	3032	3/4/16	3/27/17	Scaffold	SC	SAMEA3861632	GCA_900073055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/055/GCA_900073055.1_36337_H034800427-1	-	-
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.04746	41.1	-	FIFR01	22	2065	1951	2/10/16	3/19/17	Contig	SC	SAMEA1316601	GCA_900057985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/985/GCA_900057985.1_7114_5_14	-	LSS14
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.18285	35.3	-	MAVY01	32	2242	2133	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481597	GCA_001694155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/155/GCA_001694155.1_ASM169415v1	27411639	AB-55
Acinetobacter baumannii 1264936	1310743	PRJNA194819	194819	Proteobacteria	Gammaproteobacteria	3.92817	39.1	-	JFED01	99	3867	3612	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404489	GCA_000584475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/475/GCA_000584475.1_ASM58447v1	-	1264936
Pseudomonas aeruginosa PA45	1295076	PRJNA189678	189678	Proteobacteria	Gammaproteobacteria	6.61595	66.3	-	APMD01	124	6352	6154	4/9/13	5/19/17	Contig	CIBIO (Unitn)	SAMN02471971	GCA_000359565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/565/GCA_000359565.1_PA45	23704188	PA45
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12263	51.8	-	FFBQ01	75	2482	2168	2/9/16	3/19/17	Scaffold	SC	SAMEA2674312	GCA_900025715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/715/GCA_900025715.1_14555_5_86	-	2842STDY5881427
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.7577	38.9	-	MILA01	146	1743	1543	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569568	GCA_002026935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/935/GCA_002026935.1_MG2003-107_v1.0	28293542	MG2003-107
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.15247	39.5	-	CPLA01	96	2375	2122	3/22/15	3/4/17	Contig	SC	SAMEA1886125	GCA_001100905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/905/GCA_001100905.1_6246_4_22	-	BS_06
Escherichia coli EC1864	1005549	PRJNA65967	65967	Proteobacteria	Gammaproteobacteria	5.39539	50.2	-	AMVB01	399	5850	5368	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00808712	GCA_000303415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/415/GCA_000303415.2_ASM30341v2	-	EC1864
Mycobacterium tuberculosis XTB13-238	1427308	PRJNA229706	229706	Terrabacteria group	Actinobacteria	4.41445	65.6	-	JLHQ01	10	4308	4104	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419664	GCA_000655995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/655/995/GCA_000655995.1_Myco_tube_XTB13-238_V1	-	XTB13-238
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.98868	37.9	-	CWMQ01	197	3063	2927	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466610	GCA_001493255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/255/GCA_001493255.1_2014_82197_2	-	-
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.79771	30.4	-	CZHU01	146	1972	1676	10/11/15	4/17/17	Contig	LSHTM	SAMEA3556547	GCA_001407615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/615/GCA_001407615.1_44_S42	-	Campylobacter jejuni
Salmonella enterica subsp. enterica serovar Virchow str. SL491	465517	PRJNA20595	20595	Proteobacteria	Gammaproteobacteria	4.87688	52.0898	plasmid pSL491_3:NC_011215.1/CP001149.1; plasmid pSL491_5:NC_011214.1/CP001148.1	ABFH02	5	4992	4724	8/31/07	2/26/17	Contig	TIGR/JCVI	SAMN02415249	GCA_000171535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/535/GCA_000171535.2_ASM17153v2	21602358	SL491
Staphylococcus aureus M0268	1388534	PRJNA216707	216707	Terrabacteria group	Firmicutes	2.87106	32.8	-	JAZV01	13	3021	2862	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02325658	GCA_000530615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/615/GCA_000530615.1_Stap_aure_M0268_V1	-	M0268
Staphylococcus aureus M0284	1388535	PRJNA216708	216708	Terrabacteria group	Firmicutes	2.95846	32.9	-	JAZU01	10	3157	2976	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02325659	GCA_000530635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/635/GCA_000530635.1_Stap_aure_M0284_V1	-	M0284
Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191	573395	PRJNA30831	30831	Proteobacteria	Gammaproteobacteria	4.78574	52.1	-	ACBF01	94	4862	4513	12/4/08	5/19/17	Contig	CDC/CCID/NCZVED/DFBMD/EDLB	SAMN02415228	GCA_000173695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/173/695/GCA_000173695.1_ASM17369v1	-	CDC07-0191
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.68435	30.4	-	CZIR01	118	1796	1642	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556530	GCA_001407635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/635/GCA_001407635.1_26_S25	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.96752	37.9	-	CWKY01	61	3046	2931	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466560	GCA_001493535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/535/GCA_001493535.1_2011_176879_12c	-	-
Mycobacterium tuberculosis XTB13-239	1427309	PRJNA229707	229707	Terrabacteria group	Actinobacteria	4.42675	65.6	-	JLHP01	6	4303	4137	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419665	GCA_000656015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/015/GCA_000656015.1_Myco_tube_XTB13-239_V1	-	XTB13-239
Escherichia coli EC1862	1005547	PRJNA65963	65963	Proteobacteria	Gammaproteobacteria	5.32281	50.4	-	AMVA01	587	5813	5307	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00808711	GCA_000303435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/435/GCA_000303435.2_ASM30343v2	-	EC1862
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10007	39.5	-	CLYI01	73	2350	2116	3/21/15	3/4/17	Contig	SC	SAMEA1029109	GCA_001100925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/925/GCA_001100925.1_6983_6_48	-	SMRU2352
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.73293	38.8	-	MILN01	84	1713	1531	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569581	GCA_002026955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/955/GCA_002026955.1_MGms203_v1.0	28293542	MGms203
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.1706	51.5	-	FEPO01	75	2534	2158	2/9/16	3/21/17	Scaffold	SC	SAMEA2674361	GCA_900026725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/725/GCA_900026725.1_14324_5_24	-	2842STDY5881557
Pseudomonas aeruginosa str. C 1334	1333541	PRJNA200798	200798	Proteobacteria	Gammaproteobacteria	6.30257	66.4	-	ASQT01	669	5995	5710	6/19/13	3/15/17	Contig	University of Strathclyde	SAMN02142558	GCA_000412295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/295/GCA_000412295.1_C_1334	24167005	C 1334
Acinetobacter baumannii 1207552	1310730	PRJNA194806	194806	Proteobacteria	Gammaproteobacteria	4.11431	39.1	-	JFEC01	116	4096	3788	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404485	GCA_000584495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/495/GCA_000584495.1_ASM58449v1	-	1207552
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.04747	35.2	-	MAVZ01	60	2112	1996	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481598	GCA_001694175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/175/GCA_001694175.1_ASM169417v1	27411639	AB-56
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.28444	41.2	-	FIHL01	130	2263	2091	2/10/16	3/19/17	Contig	SC	SAMEA1316580	GCA_900057995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/995/GCA_900057995.1_7114_5_53	-	LSS53
Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony)	1142511	PRJNA82191	82191	Proteobacteria	Gammaproteobacteria	0.719535	25.2	chromosome:NC_016893.1/CP003315.1	-	1	692	642	2/10/12	4/7/17	Complete Genome	Yale University School of Public Health	SAMN02604338	GCA_000247565.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/565/GCA_000247565.1_ASM24756v1	22334516	-
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.54025	50.8	-	CXGG01	384	4960	4354	7/16/15	2/24/17	Scaffold	SC	SAMEA1013731	GCA_001256755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/755/GCA_001256755.1_6551_1_4	-	SS117077_2798526
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.05557	68.2	-	CSKS01	65	7273	6773	3/22/15	3/26/17	Scaffold	SC	SAMEA949309	GCA_001204155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/155/GCA_001204155.1_7915_5_5	-	15/96
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.02271	47.5	-	CWQW01	53	3809	3640	7/16/15	3/26/17	Scaffold	SC	SAMEA889238	GCA_001251935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/935/GCA_001251935.1_4370_2_7	-	6194
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.23838	28.9	-	FAMJ01	530	3912	3770	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664409	GCA_900011715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/715/GCA_900011715.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.04586	45.2	-	MIUD01	117	4841	4633	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368314	GCA_001727505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/505/GCA_001727505.1_ASM172750v1	-	CDC_K5306
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.6321	57	-	LGJU01	13	5640	5311	7/17/15	2/25/17	Scaffold	Broad Institute	SAMN03280279	GCA_001185915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/915/GCA_001185915.1_Kleb_pneu_CHS136_V1	-	CHS136
Enterococcus faecium	1352	PRJNA357096	357096	Terrabacteria group	Firmicutes	3.10137	37.9	-	MRYH01	287	3262	2988	2/8/17	3/29/17	Scaffold	Universidad Andres Bello	SAMN06133059	GCA_001990615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/615/GCA_001990615.1_ASM199061v1	-	97-7_S6
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.72694	67.6	-	CFZD01	1031	3772	3019	3/15/15	3/26/17	Scaffold	SC	SAMEA751362	GCA_001332555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/555/GCA_001332555.1_5633_3_7	-	B187
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.63778	31.4	-	FAZH01	15	1693	1602	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683047	GCA_001495615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/615/GCA_001495615.1_p515D	-	n/a
Enterobacter cloacae	550	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.70125	56	-	FKIB01	24	4546	4388	4/6/16	3/28/17	Scaffold	SC	SAMEA2273277	GCA_900078165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/078/165/GCA_900078165.1_11983_7_53	-	e977
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18771	64.2	-	CSVL01	40	5194	5039	3/24/15	3/18/17	Scaffold	SC	SAMEA1464868	GCA_001212885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/885/GCA_001212885.1_7396_7_12	-	PAP060
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.90304	64.1	-	CSUB01	16	4883	4739	3/24/15	3/18/17	Scaffold	SC	SAMEA1464849	GCA_001212905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/905/GCA_001212905.1_7396_6_61	-	PAP013
Candidatus Tachikawaea gelatinosa	1410383	PRJDB1515	261568	Proteobacteria	Gammaproteobacteria	0.708439	25.1	chromosome:NZ_AP014521.1/AP014521.1	-	1	668	613	9/19/14	4/10/17	Complete Genome	National Institute for Basic Biology	SAMD00013964	GCA_000828815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/815/GCA_000828815.1_ASM82881v1	25264255	UwTKB
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.90886	30.9	-	FBNH01	63	2019	1895	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683425	GCA_001495635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/635/GCA_001495635.1_H043940494	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.70325	67.6	-	CGFA01	1091	3775	2979	3/15/15	3/26/17	Scaffold	SC	SAMEA751368	GCA_001332575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/575/GCA_001332575.1_5633_3_10	-	B316
Enterococcus faecium	1352	PRJNA335386	335386	Terrabacteria group	Firmicutes	2.87638	37.7	-	MQST01	191	2949	2780	2/13/17	3/29/17	Scaffold	University of Sassari	SAMN06065915	GCA_001996345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/345/GCA_001996345.1_ASM199634v1	-	SSM5539
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.85197	57	-	LGJV01	10	5952	5666	7/17/15	2/25/17	Scaffold	Broad Institute	SAMN03280273	GCA_001185925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/925/GCA_001185925.1_Kleb_pneu_CHS130_V1	-	CHS130
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	4.96343	45.3	-	MIUC01	79	4673	4518	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368313	GCA_001727545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/545/GCA_001727545.1_ASM172754v1	-	CDC_K5282
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.16303	28.7	-	CZXC01	496	3828	3697	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664021	GCA_900011805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/805/GCA_900011805.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.041	47.8	-	CWQV01	149	3832	3091	7/16/15	3/26/17	Scaffold	SC	SAMEA889354	GCA_001251975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/975/GCA_001251975.1_4370_2_12	-	6212
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.12746	68.2	-	CSLH01	60	7358	6854	3/23/15	3/26/17	Scaffold	SC	SAMEA949394	GCA_001204275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/275/GCA_001204275.1_7910_7_3	-	P165/04
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.87215	50.7	-	CWVO01	383	5447	4694	7/17/15	2/24/17	Scaffold	SC	SAMEA3345081	GCA_001256815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/815/GCA_001256815.1_Sg_201401237_CCGTCC_L001	-	201401237_1
Candidatus Riesia sp. GBBU	1719125	PRJNA295781	295781	Proteobacteria	Gammaproteobacteria	0.534351	25.0465	chromosome:CP012849.1; plasmid unnamed:CP012848.1	-	2	499	449	3/29/17	3/29/17	Complete Genome	University of Illinois Urbana-Champaign	SAMN04088566	GCA_002074035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/035/GCA_002074035.1_ASM207403v1	-	GBBU
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.21537	40.9	-	FIIG01	51	2195	2047	2/10/16	3/19/17	Contig	SC	SAMEA1316513	GCA_900058005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/005/GCA_900058005.1_7114_5_81	-	LSS81
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.01875	35.2	-	MAWA01	41	2078	1952	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481599	GCA_001694195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/195/GCA_001694195.1_ASM169419v1	27411639	AB-7
Acinetobacter baumannii 1195185_11	1310733	PRJNA194809	194809	Proteobacteria	Gammaproteobacteria	4.1116	39	-	JFEB02	30	4008	3802	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404484	GCA_000584515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/515/GCA_000584515.2_ASM58451v2	-	1195185_11
Pseudomonas aeruginosa str. C 763	1333540	PRJNA200798	200798	Proteobacteria	Gammaproteobacteria	6.97793	66	-	ASQS01	844	6674	6282	6/19/13	3/15/17	Contig	University of Strathclyde	SAMN02142557	GCA_000412355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/355/GCA_000412355.1_C_763	24167005	C 763
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.17916	51.5	-	FEQF01	84	2525	2154	2/9/16	3/21/17	Scaffold	SC	SAMEA2674498	GCA_900026735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/735/GCA_900026735.1_14355_7_35	-	2842STDY5881664
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.63545	39.1	-	MILP01	113	1607	1455	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569583	GCA_002026985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/985/GCA_002026985.1_MGms44_v1.0	28293542	MGms44
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10665	39.5	-	CLST01	55	2317	2111	3/21/15	3/4/17	Contig	SC	SAMEA1028734	GCA_001100945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/945/GCA_001100945.1_6972_4_18	-	SMRU2610
Escherichia coli EC1856	1005546	PRJNA65961	65961	Proteobacteria	Gammaproteobacteria	5.37668	50.3	-	AMUZ01	390	5854	5374	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00808710	GCA_000303455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/455/GCA_000303455.2_ASM30345v2	-	EC1856
Mycobacterium tuberculosis XTB13-240	1427310	PRJNA229708	229708	Terrabacteria group	Actinobacteria	4.3975	65.6	-	JLHO01	10	4272	4107	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419666	GCA_000656035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/035/GCA_000656035.1_Myco_tube_XTB13-240_V1	-	XTB13-240
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.96801	37.8	-	CWLU01	115	3046	2930	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466552	GCA_001493595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/595/GCA_001493595.1_2011_163598_13	-	-
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.64556	30.5	-	CZIF01	41	1718	1586	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556553	GCA_001407655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/655/GCA_001407655.1_51_S49	-	Campylobacter jejuni
Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786	946034	PRJNA61789	61789	Proteobacteria	Gammaproteobacteria	4.84582	52.2	-	AERV01	24	4963	4595	2/2/11	5/19/17	Contig	Virginia Bioinformatics Institute	SAMN02415291	GCA_000187785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/785/GCA_000187785.2_ASM18778v2	-	TN061786
Staphylococcus aureus M0299	1388536	PRJNA216709	216709	Terrabacteria group	Firmicutes	2.90879	32.9	-	JAZT01	26	3083	2911	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02325660	GCA_000530665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/665/GCA_000530665.1_Stap_aure_M0299_V1	-	M0299
Staphylococcus aureus M0311	1388537	PRJNA216710	216710	Terrabacteria group	Firmicutes	2.9356	33	-	JAZS01	21	3090	2920	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325661	GCA_000530705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/705/GCA_000530705.1_Stap_aure_M0311_V1	-	M0311
Salmonella enterica subsp. enterica serovar Montevideo str. 315996572	745015	PRJNA46535	46535	Proteobacteria	Gammaproteobacteria	4.64899	52.2	-	AESH01	50	4714	4456	2/8/11	5/19/17	Contig	FDA	SAMN00710595	GCA_000188335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/335/GCA_000188335.2_ASM18833v2	21345093	315996572
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.65802	30.5	-	CZIW01	50	1746	1650	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556539	GCA_001407675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/675/GCA_001407675.1_35_S34	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.9919	37.9	-	CWMP01	300	3131	2947	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466602	GCA_001493615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/615/GCA_001493615.1_2014_60550_2A	-	-
Mycobacterium tuberculosis XTB13-241	1427311	PRJNA229709	229709	Terrabacteria group	Actinobacteria	4.43044	65.6	-	JLHN01	3	4314	4107	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419667	GCA_000656055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/055/GCA_000656055.1_Myco_tube_XTB13-241_V1	-	XTB13-241
Escherichia coli EC1850	1005545	PRJNA65959	65959	Proteobacteria	Gammaproteobacteria	5.37259	50.3	-	AMUY01	393	5843	5360	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00808709	GCA_000303475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/475/GCA_000303475.2_ASM30347v2	-	EC1850
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06465	39.7	-	CNUM02	168	2240	2022	3/23/15	3/5/17	Contig	SC	SAMEA1032583	GCA_001100985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/985/GCA_001100985.2_6999_5_8	-	160986
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.64029	39	-	MILT01	140	1614	1454	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569587	GCA_002027005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/005/GCA_002027005.1_MM2005-126_v1.0	28293542	MM2005-126
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.09784	51.8	-	FERH01	80	2430	2112	2/9/16	3/19/17	Scaffold	SC	SAMEA2673900	GCA_900026745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/745/GCA_900026745.1_14355_4_42	-	2842STDY5880999
Pseudomonas aeruginosa str. MSH 3	1333548	PRJNA200798	200798	Proteobacteria	Gammaproteobacteria	6.32051	66.4	-	ASQU01	1240	6055	5622	6/19/13	3/15/17	Contig	University of Strathclyde	SAMN02142565	GCA_000412375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/375/GCA_000412375.1_MSH_3	24167005	MSH 3
Acinetobacter baumannii 1237893	1310744	PRJNA194820	194820	Proteobacteria	Gammaproteobacteria	4.01991	39.1	-	JFEA01	79	3948	3688	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404486	GCA_000584535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/535/GCA_000584535.1_ASM58453v1	-	1237893
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.21701	35.4	-	MAWB01	45	2265	2162	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481600	GCA_001694205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/205/GCA_001694205.1_ASM169420v1	27411639	AB-70
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.15671	41	-	FIIH01	89	2214	2038	2/10/16	3/19/17	Contig	SC	SAMEA1316699	GCA_900058015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/015/GCA_900058015.1_7114_5_83	-	LSS83
Spiroplasma kunkelii CR2-3x	273035	PRJNA270865	270865	Terrabacteria group	Tenericutes	1.51456	25.0104	chromosome:NZ_CP010899.1/CP010899.1; plasmid pSKU205:NZ_CP012424.1/CP012424.1; plasmid pSKU226:NZ_CP012423.1/CP012423.1; plasmid pSKU76:NZ_CP012425.1/CP012425.1	-	4	1684	1369	8/26/15	4/16/17	Complete Genome	Beltsville Agricultural Research Center	SAMN03269975	GCA_001274875.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/274/875/GCA_001274875.1_ASM127487v1	26494665	CR2-3x
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.62929	50.9	-	CXJD01	377	5162	4453	7/16/15	2/24/17	Scaffold	SC	SAMEA2003900	GCA_001256855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/855/GCA_001256855.1_8289_7_91	-	87669
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.00656	68.3	-	CSKC01	63	7224	6748	3/23/15	3/26/17	Scaffold	SC	SAMEA949314	GCA_001204455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/455/GCA_001204455.1_7915_5_6	-	4033-10
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.03204	47.5	-	CWRK01	52	3816	3680	7/16/15	3/26/17	Scaffold	SC	SAMEA889191	GCA_001252055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/055/GCA_001252055.1_5174_5_2	-	4551
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.17565	28.5	-	CZXX01	245	3868	3752	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664038	GCA_900011815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/815/GCA_900011815.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.06863	45.3	-	MIUT01	126	4819	4650	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368328	GCA_001727565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/565/GCA_001727565.1_ASM172756v1	-	CDC_K5437
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.87584	56.9	-	LGJW01	6	5949	5658	7/17/15	2/25/17	Scaffold	Broad Institute	SAMN03280267	GCA_001185945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/945/GCA_001185945.1_Kleb_pneu_CHS124_V1	-	CHS124
Enterococcus faecium	1352	PRJNA319060	319060	Terrabacteria group	Firmicutes	2.77223	37.9	-	MEGX01	81	2868	2628	2/24/17	2/27/17	Scaffold	IBT-UNAM	SAMN04902338	GCA_002006745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/745/GCA_002006745.1_ASM200674v1	-	D
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.81354	67.9	-	CFYV01	325	3684	3301	3/15/15	3/26/17	Scaffold	SC	SAMEA751372	GCA_001332595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/595/GCA_001332595.1_5476_3_6	-	B100
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.6598	31.4	-	FBJW01	27	1719	1621	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683329	GCA_001495655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/655/GCA_001495655.1_H073180384	-	n/a
Enterobacter cloacae subsp. cloacae NCTC 9394	718254	PRJNA45967	45967	Proteobacteria	Gammaproteobacteria	4.90876	55.2	chromosome:FP929040.1	-	1	3797	3725	3/25/10	2/27/15	Chromosome	metaHIT	SAMEA3138380	GCA_000210775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/210/775/GCA_000210775.1_ASM21077v1	-	NCTC 9394
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82919	64.2	-	CSTF01	49	4859	4698	3/24/15	3/18/17	Scaffold	SC	SAMEA1464872	GCA_001212945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/945/GCA_001212945.1_7396_8_49	-	PAP097
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16064	64.1	-	CSUJ01	15	5264	5088	3/24/15	3/18/17	Scaffold	SC	SAMEA1464938	GCA_001212965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/965/GCA_001212965.1_7396_6_71	-	PAP023
Enterobacter cloacae	550	PRJNA338268	338268	Proteobacteria	Gammaproteobacteria	4.85407	55	chromosome:CP016906.1	-	1	4192	4052	8/23/16	8/23/16	Chromosome	Birla Institute of Technology & Science	SAMN05526242	GCA_001708345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/345/GCA_001708345.1_ASM170834v1	-	-
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66067	31.4	-	FBCI01	25	1721	1621	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683123	GCA_001495675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/675/GCA_001495675.1_EC4356	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.76137	67.7	-	CGFP01	758	3793	3124	3/15/15	3/27/17	Scaffold	SC	SAMEA751374	GCA_001332615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/615/GCA_001332615.1_5476_3_5	-	B099
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.76682	38.4	-	NGMH01	6	2676	2471	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634052	GCA_002140215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/215/GCA_002140215.1_ASM214021v1	-	10B2_DIV0370
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.86414	57	-	LGJX01	11	5968	5684	7/17/15	2/25/17	Scaffold	Broad Institute	SAMN03280263	GCA_001185955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/955/GCA_001185955.1_Kleb_pneu_CHS120_V1	-	CHS120
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.07735	45.3	-	MIUB01	115	4844	4667	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368312	GCA_001727575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/575/GCA_001727575.1_ASM172757v1	-	CDC_K5281
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.24001	28.9	-	CZYT01	1122	3902	3684	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664054	GCA_900011835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/835/GCA_900011835.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.94812	47.5	-	CWRP01	47	3736	3599	7/16/15	3/26/17	Scaffold	SC	SAMEA889305	GCA_001252075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/075/GCA_001252075.1_5174_5_7	-	4121
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08377	68.2	-	CSPX01	68	7300	6778	3/22/15	3/26/17	Scaffold	SC	SAMEA807026	GCA_001204515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/515/GCA_001204515.1_7910_5_3	-	C69
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.66014	50.7	-	CWVA01	374	5183	4480	7/17/15	2/24/17	Scaffold	SC	SAMEA3345067	GCA_001256875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/875/GCA_001256875.1_Sg_201400003_CGATGT_L001	-	201400003_1
Legionella pneumophila	446	PRJNA281293	281293	Proteobacteria	Gammaproteobacteria	3.46037	38.1	-	LBAV01	47	-	-	3/8/16	3/9/16	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr"	SAMN03486948	GCA_001582825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/825/GCA_001582825.1_ASM158282v1	26888563	ATCC 33156
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.15485	41.1	-	FIIK01	90	2212	2038	2/10/16	3/19/17	Contig	SC	SAMEA1316689	GCA_900058025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/025/GCA_900058025.1_7114_5_84	-	LSS84
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.02965	35.2	-	MAWC01	45	2082	1968	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481601	GCA_001694235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/235/GCA_001694235.1_ASM169423v1	27411639	ATL-29
Acinetobacter baumannii 1271651	1310732	PRJNA194808	194808	Proteobacteria	Gammaproteobacteria	3.96482	39.2	-	JFDZ01	97	3908	3612	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404491	GCA_000584555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/555/GCA_000584555.1_ASM58455v1	-	1271651
Pseudomonas aeruginosa str. E2UoS	1333550	PRJNA200798	200798	Proteobacteria	Gammaproteobacteria	6.63459	66.2	-	ASQV01	341	6365	6125	6/19/13	3/15/17	Contig	University of Strathclyde	SAMN02142567	GCA_000412395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/395/GCA_000412395.1_E_2	24167005	E2UoS
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16593	51.5	-	FERJ01	84	2528	2157	2/9/16	3/21/17	Scaffold	SC	SAMEA2673905	GCA_900026755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/755/GCA_900026755.1_14355_4_44	-	2842STDY5881001
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.64922	38.9	-	MIKX01	81	1639	1459	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569565	GCA_002027025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/025/GCA_002027025.1_MCms1078_v1.0	28293542	MCms1078
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12649	39.6	-	CLML01	58	2281	1995	3/21/15	3/11/17	Contig	SC	SAMEA1028698	GCA_001101005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/005/GCA_001101005.1_6938_7_14	-	type strain: N
Escherichia coli EC1849	1005544	PRJNA65957	65957	Proteobacteria	Gammaproteobacteria	5.35674	50.3	-	AMUX01	425	5835	5353	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00808708	GCA_000303495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/495/GCA_000303495.2_ASM30349v2	-	EC1849
Mycobacterium tuberculosis XTB13-242	1427312	PRJNA229710	229710	Terrabacteria group	Actinobacteria	4.42556	65.6	-	JLHM01	4	4316	4114	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419668	GCA_000656075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/075/GCA_000656075.1_Myco_tube_XTB13-242_V1	-	XTB13-242
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.01003	37.8	-	CWKO01	98	3105	2971	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466593	GCA_001493655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/493/655/GCA_001493655.1_2012_318878_4	-	-
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.6466	30.5	-	CZIA01	51	1743	1606	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556528	GCA_001407695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/695/GCA_001407695.1_24_S23	-	Campylobacter jejuni
Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1	745017	PRJNA46539	46539	Proteobacteria	Gammaproteobacteria	4.64876	52.2	-	AESI01	51	4720	4458	2/8/11	5/19/17	Contig	FDA	SAMN00710606	GCA_000188355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/355/GCA_000188355.2_ASM18835v2	21345093	495297-1
Staphylococcus aureus M0332	1388538	PRJNA216711	216711	Terrabacteria group	Firmicutes	2.8795	32.9	-	JAZR01	12	3023	2851	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02325662	GCA_000530775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/775/GCA_000530775.1_Stap_aure_M0332_V1	-	M0332
Staphylococcus aureus M0343	1388539	PRJNA216712	216712	Terrabacteria group	Firmicutes	2.8948	32.9	-	JAZQ01	16	3021	2860	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325663	GCA_000530815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/815/GCA_000530815.1_Stap_aure_M0343_V1	-	M0343
Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3	745018	PRJNA46541	46541	Proteobacteria	Gammaproteobacteria	4.64869	52.2	-	AESJ01	39	4694	4472	2/8/11	5/19/17	Contig	FDA	SAMN00710617	GCA_000188375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/375/GCA_000188375.2_ASM18837v2	21345093	495297-3
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.60634	30.4	-	CZJL01	66	1697	1573	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556565	GCA_001407715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/715/GCA_001407715.1_63_S61	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.01766	37.9	-	CWLK01	60	3078	2960	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466551	GCA_001494195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/195/GCA_001494195.1_2011_162703_17	-	-
Mycobacterium tuberculosis XTB13-244	1427313	PRJNA229711	229711	Terrabacteria group	Actinobacteria	4.39493	65.5	-	JLHL01	5	4287	4101	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419669	GCA_000656095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/095/GCA_000656095.1_Myco_tube_XTB13-244_V1	-	XTB13-244
Escherichia coli EC1848	1005543	PRJNA65955	65955	Proteobacteria	Gammaproteobacteria	5.36958	50.3	-	AMUW01	391	5842	5362	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00808707	GCA_000303515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/515/GCA_000303515.2_ASM30351v2	-	EC1848
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.1431	39.7	-	CMVJ01	99	2314	2016	3/23/15	3/11/17	Contig	SC	SAMEA1022873	GCA_001101025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/025/GCA_001101025.1_5756_6_1	-	277
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.6768	38.9	-	MILX01	118	1647	1474	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569591	GCA_002027045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/045/GCA_002027045.1_MU2003-84_v1.0	28293542	MU2003-84
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.18938	51.6	-	FETD01	85	2560	2193	2/9/16	3/21/17	Scaffold	SC	SAMEA2673937	GCA_900026765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/765/GCA_900026765.1_14355_5_52	-	2842STDY5881105
Pseudomonas aeruginosa str. PA 62	1333551	PRJNA200798	200798	Proteobacteria	Gammaproteobacteria	6.39325	66.3	-	ASQW01	648	6153	5865	6/19/13	3/15/17	Contig	University of Strathclyde	SAMN02142568	GCA_000412415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/415/GCA_000412415.1_PA_62	24167005	PA 62
Acinetobacter baumannii 1271213	1310737	PRJNA194813	194813	Proteobacteria	Gammaproteobacteria	4.04408	39.1	-	JFDX01	82	3984	3706	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404490	GCA_000584595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/595/GCA_000584595.1_ASM58459v1	-	1271213
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.02879	35.2	-	MAWE01	46	2077	1974	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481603	GCA_001694255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/255/GCA_001694255.1_ASM169425v1	27411639	ATL-77
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.00312	41.2	-	FIJO01	29	1988	1897	2/10/16	3/19/17	Contig	SC	SAMEA1316548	GCA_900058035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/035/GCA_900058035.1_7054_7_28	-	SS1023
Legionella pneumophila str. 121004	1383063	PRJNA214447	214447	Proteobacteria	Gammaproteobacteria	3.65819	38.2	-	AVNJ01	60	3451	3286	8/29/13	8/29/13	Contig	Queensland Department of Health	SAMN02303586	GCA_000455845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/845/GCA_000455845.1_121004	-	121004
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.77202	50.7	-	CXNA01	411	5335	4605	7/16/15	2/24/17	Scaffold	SC	SAMEA1968407	GCA_001256895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/895/GCA_001256895.1_9870_6_38	-	143982
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.05325	68.3	-	CSKZ01	55	7256	6771	3/23/15	3/26/17	Scaffold	SC	SAMEA949431	GCA_001205635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/635/GCA_001205635.1_7910_7_8	-	P164/04
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.01236	47.4	-	CWSJ01	71	3836	3691	7/16/15	3/26/17	Scaffold	SC	SAMEA889329	GCA_001252495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/495/GCA_001252495.1_5174_7_7	-	A18
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.20315	28.6	-	CZYW01	556	3914	3750	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664055	GCA_900011845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/845/GCA_900011845.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.07915	45.3	-	MIUQ01	118	4829	4668	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368324	GCA_001727585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/585/GCA_001727585.1_ASM172758v1	-	CDC_K5429
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.90782	56.9	-	LGJY01	8	5937	5771	7/17/15	9/2/16	Scaffold	Broad Institute	SAMN03280262	GCA_001185985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/185/985/GCA_001185985.1_Kleb_pneu_CHS119_V1	-	CHS119
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	3.86587	42.8	-	NGMG01	7	3611	3440	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634051	GCA_002140235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/235/GCA_002140235.1_ASM214023v1	-	10E2_DIV0373
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.77665	67.8	-	CFXW01	590	3748	3172	3/15/15	3/27/17	Scaffold	SC	SAMEA751382	GCA_001332655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/655/GCA_001332655.1_5601_3_8	-	B331
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66059	31.4	-	FBBE01	22	1720	1627	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683089	GCA_001495695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/695/GCA_001495695.1_EC3444	-	n/a
Enterobacter cloacae	550	PRJNA304405	304405	Proteobacteria	Gammaproteobacteria	5.29634	55.1	-	LOBN01	10	5102	4065	3/21/16	3/21/16	Scaffold	University of Pittsburgh School of Medicine	SAMN04300406	GCA_001595405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/405/GCA_001595405.1_ASM159540v1	-	G6809
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.27669	64	-	CSTW01	29	5320	5133	3/24/15	3/18/17	Scaffold	SC	SAMEA1464901	GCA_001212985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/985/GCA_001212985.1_7396_6_58	-	PAP010
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.91773	62.4	-	CSTU01	1539	5670	5378	3/24/15	3/18/17	Scaffold	SC	SAMEA1464850	GCA_001213005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/005/GCA_001213005.1_7396_6_51	-	PAP003
Enterobacter cloacae subsp. cloacae GS1	1177927	PRJNA161545	161545	Proteobacteria	Gammaproteobacteria	4.50071	55.5	-	AJXP01	48	4053	3955	5/30/12	11/19/13	Contig	Madurai Kamaraj University	SAMN01001254	GCA_000264705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/705/GCA_000264705.1_EntClo_1.0	22843603	GS1
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.72622	31.3	-	FBNZ01	37	1802	1696	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683422	GCA_001495735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/735/GCA_001495735.1_H060280132	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.81087	67.9	-	CVIT01	323	3681	3294	4/2/15	3/27/17	Scaffold	SC	SAMEA751401	GCA_001332675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/675/GCA_001332675.1_6062_1_12	-	B304
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.75453	38.5	-	NGMD01	16	2768	2529	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634054	GCA_002140255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/255/GCA_002140255.1_ASM214025v1	-	11B10_MSG5005
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.91608	56.9	-	LGJZ01	7	5963	5782	7/17/15	9/2/16	Scaffold	Broad Institute	SAMN03280251	GCA_001186005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/005/GCA_001186005.1_Kleb_pneu_CHS108_V1	-	CHS108
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.08329	45.3	-	MIUA01	110	4843	4673	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368311	GCA_001727625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/625/GCA_001727625.1_ASM172762v1	-	CDC_K5280
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.17204	28.6	-	CZYZ01	737	3879	3720	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664058	GCA_900011855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/855/GCA_900011855.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.98915	47.5	-	CWNT01	58	3751	3555	7/16/15	3/26/17	Scaffold	SC	SAMEA889204	GCA_001252675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/675/GCA_001252675.1_4056_2_6	-	V5
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08197	68.2	-	CSNB01	79	7303	6787	3/23/15	3/26/17	Scaffold	SC	SAMEA807036	GCA_001205935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/935/GCA_001205935.1_7907_5_22	-	C22
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.6632	50.7	-	CWXK01	414	5436	4452	7/16/15	2/24/17	Scaffold	SC	SAMEA2434371	GCA_001256915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/915/GCA_001256915.1_12850_1_44	-	KY 1058
Legionella pneumophila str. Leg01/11	1383066	PRJNA214450	214450	Proteobacteria	Gammaproteobacteria	3.69145	38.2	-	AVOV01	109	3513	3260	9/11/13	9/11/13	Contig	Queensland Department of Health	SAMN02303589	GCA_000465675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/675/GCA_000465675.1_Leg01_11	-	Leg01/11
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05358	41.2	-	FIOS01	19	2064	1952	2/10/16	3/19/17	Contig	SC	SAMEA1566060	GCA_900058045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/045/GCA_900058045.1_8337_6_67	-	EN271
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.022	35.2	-	MAWF01	70	2073	1962	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481604	GCA_001694265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/265/GCA_001694265.1_ASM169426v1	27411639	ATL-91
Acinetobacter baumannii 1188188	1310742	PRJNA194818	194818	Proteobacteria	Gammaproteobacteria	4.13646	39	-	JFDV01	89	4107	3809	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404483	GCA_000584635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/635/GCA_000584635.1_ASM58463v1	-	1188188
Pseudomonas aeruginosa str. MSH 10	1333549	PRJNA200798	200798	Proteobacteria	Gammaproteobacteria	6.34694	66.4	-	ASQX01	943	6056	5717	6/19/13	3/15/17	Contig	University of Strathclyde	SAMN02142566	GCA_000412435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/435/GCA_000412435.1_MSH_10	24167005	MSH 10
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15932	51.6	-	FETZ01	82	2505	2170	2/9/16	3/19/17	Scaffold	SC	SAMEA2673799	GCA_900026775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/775/GCA_900026775.1_14355_6_12	-	2842STDY5881161
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.69392	38.9	-	MILR01	86	1710	1525	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569585	GCA_002027065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/065/GCA_002027065.1_MM2005-72_v1.0	28293542	MM2005-72
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10363	39.5	-	CKHA01	44	2311	2098	3/21/15	3/11/17	Contig	SC	SAMEA1023769	GCA_001101085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/085/GCA_001101085.1_6631_1_9	-	23F
Escherichia coli EC1847	1005542	PRJNA65953	65953	Proteobacteria	Gammaproteobacteria	5.34672	50.3	-	AMUV01	469	5829	5345	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00808706	GCA_000303535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/535/GCA_000303535.2_ASM30353v2	-	EC1847
Mycobacterium tuberculosis XTB13-245	1427314	PRJNA229712	229712	Terrabacteria group	Actinobacteria	4.43626	65.6	-	JLHK01	11	4319	4113	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419670	GCA_000656115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/115/GCA_000656115.1_Myco_tube_XTB13-245_V1	-	XTB13-245
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.99464	37.9	-	CWKT01	76	3088	2955	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466567	GCA_001494235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/235/GCA_001494235.1_2012_281399_14	-	-
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.66658	30.5	-	CZJM01	82	1782	1604	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556563	GCA_001407735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/735/GCA_001407735.1_61_S59	-	Campylobacter jejuni
Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4	745019	PRJNA46543	46543	Proteobacteria	Gammaproteobacteria	4.64937	52.2	-	AESK01	44	4706	4467	2/8/11	5/19/17	Contig	FDA	SAMN00710624	GCA_000188395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/395/GCA_000188395.2_ASM18839v2	21345093	495297-4
Staphylococcus aureus M0352	1388540	PRJNA216713	216713	Terrabacteria group	Firmicutes	2.92579	32.9	-	JAZP01	13	3106	2945	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325664	GCA_000530865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/865/GCA_000530865.1_Stap_aure_M0352_V1	-	M0352
Staphylococcus aureus M0365	1388541	PRJNA216714	216714	Terrabacteria group	Firmicutes	2.87513	32.9	-	JAZO01	11	3012	2858	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325665	GCA_000530925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/925/GCA_000530925.1_Stap_aure_M0365_V1	-	M0365
Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1	745020	PRJNA46545	46545	Proteobacteria	Gammaproteobacteria	4.65068	52.2	-	AESL01	39	4706	4476	2/8/11	5/19/17	Contig	FDA	SAMN00710625	GCA_000188415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/415/GCA_000188415.2_ASM18841v2	21345093	515920-1
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.71369	30.5	-	CZIT01	46	1812	1700	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556537	GCA_001407755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/755/GCA_001407755.1_33_S32	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.1145	37.8	-	CWLL01	53	3204	3064	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466575	GCA_001494355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/355/GCA_001494355.1_2012_298383_3	-	-
Mycobacterium tuberculosis XTB13-246	1427315	PRJNA229713	229713	Terrabacteria group	Actinobacteria	4.40426	65.5	-	JLHJ01	3	4271	4104	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419671	GCA_000656135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/135/GCA_000656135.1_Myco_tube_XTB13-246_V1	-	XTB13-246
Escherichia coli EC1846	1005541	PRJNA65951	65951	Proteobacteria	Gammaproteobacteria	5.35172	50.3	-	AMUU01	494	5841	5350	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00808704	GCA_000303555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/555/GCA_000303555.2_ASM30355v2	-	EC1846
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12168	39.5	-	CLIO01	42	2347	2108	3/21/15	3/11/17	Contig	SC	SAMEA1028933	GCA_001101125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/125/GCA_001101125.1_6925_7_15	-	SMRU2511
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.6475	39	-	MILU01	141	1648	1479	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569588	GCA_002027085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/085/GCA_002027085.1_MM2006-480_v1.0	28293542	MM2006-480
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11918	51.8	-	FEUA01	74	2475	2151	2/9/16	3/19/17	Scaffold	SC	SAMEA2673802	GCA_900026785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/785/GCA_900026785.1_14355_6_13	-	2842STDY5881162
Pseudomonas aeruginosa str. PA 17	1333546	PRJNA200798	200798	Proteobacteria	Gammaproteobacteria	6.22289	66.5	-	ASQY01	1245	5928	5525	6/19/13	3/15/17	Contig	University of Strathclyde	SAMN02142563	GCA_000412455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/455/GCA_000412455.1_PA_17	24167005	PA 17
Acinetobacter baumannii 1178044	1310731	PRJNA194807	194807	Proteobacteria	Gammaproteobacteria	4.006	39.1	-	JFDU01	94	3994	3694	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404482	GCA_000584655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/655/GCA_000584655.1_ASM58465v1	-	1178044
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.13376	35.5	-	MAWH01	36	2213	2094	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481606	GCA_001694285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/285/GCA_001694285.1_ASM169428v1	27411639	BE-PW-052
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.06945	41.2	-	FIOU01	22	2089	1980	2/10/16	3/19/17	Contig	SC	SAMEA1566043	GCA_900058055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/055/GCA_900058055.1_8337_6_68	-	EN281
Legionella pneumophila str. Leg01/53	1383065	PRJNA214449	214449	Proteobacteria	Gammaproteobacteria	3.6635	38.3	-	AVOW01	123	3513	2843	9/11/13	9/11/13	Contig	Queensland Department of Health	SAMN02303588	GCA_000465695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/695/GCA_000465695.1_Leg01_53	-	Leg01/53
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.72349	50.7	-	CWVR01	395	5302	4529	7/16/15	2/24/17	Scaffold	SC	SAMEA3345084	GCA_001256935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/935/GCA_001256935.1_Sg_201401464_GTGAAA_L001	-	201401464_1
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08811	68.2	-	CSLE01	60	7314	6824	3/22/15	3/26/17	Scaffold	SC	SAMEA1483587	GCA_001206455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/455/GCA_001206455.1_7910_5_21	-	G. Shepherd
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.03301	47.5	-	CWRD01	46	3825	3671	7/16/15	3/26/17	Scaffold	SC	SAMEA889236	GCA_001252775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/775/GCA_001252775.1_4370_2_9	-	6215
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.39055	28.8	-	CZZA01	380	4088	3961	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664059	GCA_900011865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/865/GCA_900011865.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.09271	45.2	-	MIUP01	139	4826	4653	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN03358834	GCA_001727645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/645/GCA_001727645.1_ASM172764v1	-	CDC_K5428
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.89044	56.9	-	LGKA01	7	5981	5690	7/17/15	2/25/17	Scaffold	Broad Institute	SAMN03280246	GCA_001186025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/025/GCA_001186025.1_Kleb_pneu_CHS103_V1	-	CHS103
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.78085	38	-	NGMC01	3	2810	2618	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634057	GCA_002140295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/295/GCA_002140295.1_ASM214029v1	-	11B6_DIV0698
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.68933	67.5	-	CFZW01	1038	3766	2957	3/15/15	3/27/17	Scaffold	SC	SAMEA751407	GCA_001332695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/695/GCA_001332695.1_5601_3_11	-	B334
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65711	31.4	-	FBJO01	37	1710	1620	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683314	GCA_001495755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/755/GCA_001495755.1_UNOR383B	-	n/a
Enterobacter cloacae MR2	1312879	PRJNA195541	195541	Proteobacteria	Gammaproteobacteria	4.75806	55.1	-	ARYB01	230	-	-	5/13/13	1/8/14	Contig	"Department of Biotechnology, Junagadh Agricultural University, Junagadh, Gujarat, INDIA"	SAMN02470114	GCA_000390425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/425/GCA_000390425.1_ASM39042v1	-	MR2
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96404	64.3	-	CSVC01	68	4956	4757	3/24/15	3/18/17	Scaffold	SC	SAMEA1464857	GCA_001213025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/025/GCA_001213025.1_7396_6_91	-	PAP043
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.83939	64.2	-	CSTV01	49	4872	4728	3/24/15	3/18/17	Scaffold	SC	SAMEA1464921	GCA_001213065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/065/GCA_001213065.1_7396_6_57	-	PAP009
Enterobacter cloacae ISC8	1432556	PRJEB4815	232414	Proteobacteria	Gammaproteobacteria	4.67675	55.1	-	CBWO01	348	-	5338	1/2/14	1/30/15	Contig	AIT	SAMEA3138871	GCA_000530005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/005/GCA_000530005.1_ISC8v1	-	ISC8
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.70087	31.3	-	FBNB01	27	1775	1679	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683405	GCA_001495775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/775/GCA_001495775.1_p546A	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.78157	67.8	-	CFWH01	552	3745	3191	3/15/15	3/27/17	Scaffold	SC	SAMEA751409	GCA_001332715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/715/GCA_001332715.1_5476_3_7	-	B101
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.79086	38	-	NGMB01	2	2825	2624	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634036	GCA_002140315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/315/GCA_002140315.1_ASM214031v1	-	11C6_DIV0699
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.87154	56.9	-	LGKB01	11	5908	5737	7/17/15	9/2/16	Scaffold	Broad Institute	SAMN03280230	GCA_001186035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/035/GCA_001186035.1_Kleb_pneu_CHS87_V1	-	CHS87
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.17288	45.2	-	MITZ01	93	4895	4747	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368310	GCA_001727655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/655/GCA_001727655.1_ASM172765v1	-	CDC_K5279
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.13063	28.7	-	CZZG01	1351	3712	3522	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664066	GCA_900011875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/875/GCA_900011875.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.87001	47.8	-	CWOZ01	132	3655	3453	7/16/15	3/26/17	Scaffold	SC	SAMEA889375	GCA_001252855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/855/GCA_001252855.1_3002_8_2	-	4111
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08521	68.2	-	CSOV01	71	7303	6790	3/23/15	3/26/17	Scaffold	SC	SAMEA807025	GCA_001206495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/495/GCA_001206495.1_7910_5_4	-	C70
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.69372	50.7	-	CWXN01	395	5225	4487	7/16/15	2/24/17	Scaffold	SC	SAMEA2445688	GCA_001256955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/955/GCA_001256955.1_12971_8_10	-	H081960581
Legionella pneumophila str. Leg01/20	1383064	PRJNA214448	214448	Proteobacteria	Gammaproteobacteria	3.65759	38.3	-	AWES01	95	3474	3196	9/11/13	9/11/13	Contig	Queensland Department of Health	SAMN02303587	GCA_000465915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/915/GCA_000465915.1_Leg01_20	-	Leg01/20
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.11029	41.2	-	FIRV01	20	2143	2032	2/10/16	3/19/17	Contig	SC	SAMEA1566185	GCA_900058065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/065/GCA_900058065.1_8525_5_86	-	VS3865
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.15019	35.5	-	MAWI01	38	2201	2088	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481607	GCA_001694315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/315/GCA_001694315.1_ASM169431v1	27411639	BE-PW-058
Acinetobacter baumannii 1095464	1310747	PRJNA194823	194823	Proteobacteria	Gammaproteobacteria	3.97597	39	-	JFDT01	100	3946	3703	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404481	GCA_000584675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/675/GCA_000584675.1_ASM58467v1	-	1095464
Pseudomonas aeruginosa str. PA 17SCV	1333547	PRJNA200798	200798	Proteobacteria	Gammaproteobacteria	6.17801	66.4	-	ASRA01	1853	5990	5360	6/19/13	3/15/17	Contig	University of Strathclyde	SAMN02142564	GCA_000412495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/495/GCA_000412495.1_PA_17_SmallColonyVariant	24167005	PA 17(small_colony_variant)
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15126	51.6	-	FEUY01	76	2488	2138	2/9/16	3/21/17	Scaffold	SC	SAMEA2673987	GCA_900026795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/795/GCA_900026795.1_14355_6_86	-	2842STDY5881235
Helicobacter pylori	210	PRJNA338771	338771	Proteobacteria	delta/epsilon subdivisions	1.68226	38.9	-	MILV01	107	1701	1502	3/14/17	4/17/17	Contig	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN05569589	GCA_002027125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/125/GCA_002027125.1_MM2006-56_v1.0	28293542	MM2006-56
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09463	39.6	-	CNRL02	228	2243	2039	3/23/15	3/11/17	Contig	SC	SAMEA1032722	GCA_001101145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/145/GCA_001101145.2_6999_1_8	-	R34-3191
Escherichia coli EC1737	1005539	PRJNA65947	65947	Proteobacteria	Gammaproteobacteria	5.36814	50.3	-	AMUT01	440	5815	5337	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00808703	GCA_000303575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/575/GCA_000303575.2_ASM30357v2	-	EC1737
Mycobacterium tuberculosis XTB13-247	1427316	PRJNA229714	229714	Terrabacteria group	Actinobacteria	4.38623	65.6	-	JLHI01	12	4267	4093	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419672	GCA_000656155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/155/GCA_000656155.1_Myco_tube_XTB13-247_V1	-	XTB13-247
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.97383	37.8	-	CWMZ01	157	3062	2941	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466614	GCA_001494455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/455/GCA_001494455.1_2012_195088_6	-	-
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.71375	30.3	-	CZIB01	59	1814	1673	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556519	GCA_001407775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/775/GCA_001407775.1_16_S15	-	Campylobacter jejuni
Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2	745021	PRJNA46547	46547	Proteobacteria	Gammaproteobacteria	4.65151	52.2	-	AESM01	34	4705	4477	2/8/11	5/19/17	Contig	FDA	SAMN00710626	GCA_000188435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/435/GCA_000188435.2_ASM18843v2	21345093	515920-2
Staphylococcus aureus M0121	1388542	PRJNA216715	216715	Terrabacteria group	Firmicutes	2.87058	32.9	-	JAZN01	22	3029	2872	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325666	GCA_000530965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/965/GCA_000530965.1_Stap_aure_M0121_V1	-	M0121
Staphylococcus aureus M0130	1388543	PRJNA216716	216716	Terrabacteria group	Firmicutes	2.90575	32.9	-	JAZM01	33	3060	2891	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325667	GCA_000530995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/995/GCA_000530995.1_Stap_aure_M0130_V1	-	M0130
Salmonella enterica subsp. enterica serovar Montevideo str. 531954	745022	PRJNA46549	46549	Proteobacteria	Gammaproteobacteria	4.32445	52.5	-	AESN01	132	4379	4098	2/8/11	5/19/17	Contig	FDA	SAMN00710627	GCA_000188455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/455/GCA_000188455.2_ASM18845v2	21345093	531954
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.71094	30.4	-	CZII01	98	1846	1692	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556507	GCA_001407795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/795/GCA_001407795.1_3_S3	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.0373	37.8	-	CWKW01	112	3137	3013	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466563	GCA_001494495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/495/GCA_001494495.1_2013_148278_14	-	-
Mycobacterium tuberculosis XTB13-249	1427317	PRJNA229715	229715	Terrabacteria group	Actinobacteria	4.41248	65.6	-	JLHH01	6	4286	4101	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419673	GCA_000656175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/175/GCA_000656175.1_Myco_tube_XTB13-249_V1	-	XTB13-249
Escherichia coli EC1736	1005538	PRJNA65945	65945	Proteobacteria	Gammaproteobacteria	5.37644	50.3	-	AMUS01	382	5814	5340	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00808702	GCA_000303595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/595/GCA_000303595.2_ASM30359v2	-	EC1736
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.06778	39.7	-	CLKL01	71	2285	2053	3/21/15	3/11/17	Contig	SC	SAMEA1028907	GCA_001101165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/165/GCA_001101165.1_6938_5_1	-	SMRU2641
Helicobacter pylori	210	PRJNA362473	362473	Proteobacteria	delta/epsilon subdivisions	1.71262	39.3	-	MTLF01	282	1662	1479	4/7/17	4/13/17	Contig	"MedBiotech laboratory, faculty of medicine and pharmacy, rabat/ Mohamed V university rabat"	SAMN06240245	GCA_002081955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/955/GCA_002081955.1_ASM208195v1	-	HP725g
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16516	51.6	-	FEVQ01	86	2506	2170	2/9/16	3/19/17	Scaffold	SC	SAMEA2674080	GCA_900026805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/805/GCA_900026805.1_14324_4_28	-	2842STDY5881273
Pseudomonas aeruginosa str. C 1426	1333542	PRJNA200798	200798	Proteobacteria	Gammaproteobacteria	6.39776	66.4	-	ASRD01	421	6116	5888	6/19/13	3/15/17	Contig	University of Strathclyde	SAMN02142559	GCA_000412555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/555/GCA_000412555.1_C_1426	24167005	C 1426
Acinetobacter baumannii 1064293_45	1310750	PRJNA194826	194826	Proteobacteria	Gammaproteobacteria	3.92413	39	-	JFDS01	184	3797	3542	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404480	GCA_000584695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/695/GCA_000584695.1_ASM58469v1	-	1064293_45
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.20546	35.4	-	MAWJ01	55	2304	2181	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481608	GCA_001694325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/325/GCA_001694325.1_ASM169432v1	27411639	BE-PW-073
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04677	41.1	-	FITF01	69	2073	1946	2/10/16	3/19/17	Contig	SC	SAMEA1566138	GCA_900058075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/075/GCA_900058075.1_8525_5_12	-	FX483_3
Legionella pneumophila Leg01/16	1370127	PRJNA213257	213257	Proteobacteria	Gammaproteobacteria	3.65823	38.2	-	AWQT01	581	-	-	9/17/13	9/17/13	Contig	Queensland Department of Health	SAMN02264578	GCA_000468235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/235/GCA_000468235.1_Legionella_pneumophila_Leg01_16	-	Leg01/16
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.82845	50.7	-	CXJJ01	381	5487	4685	7/16/15	2/24/17	Scaffold	SC	SAMEA2003430	GCA_001256995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/995/GCA_001256995.1_8289_7_96	-	89349
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.18416	68.1	-	CSKL01	76	7435	6956	3/23/15	3/26/17	Scaffold	SC	SAMEA949464	GCA_001207035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/035/GCA_001207035.1_7910_7_18	-	EB 6103/04
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.98545	47.5	-	CWOB01	71	3760	3508	7/16/15	3/26/17	Scaffold	SC	SAMEA889347	GCA_001252875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/875/GCA_001252875.1_4056_6_5	-	A152
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.14135	28.4	-	CZZI01	271	3810	3687	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664069	GCA_900011895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/895/GCA_900011895.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.09017	45.3	-	MIUJ01	118	4842	4679	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368320	GCA_001727665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/665/GCA_001727665.1_ASM172766v1	-	CDC_K5328
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.695	57.1	-	LGKC01	8	5782	5490	7/17/15	2/25/17	Scaffold	Broad Institute	SAMN03280229	GCA_001186065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/065/GCA_001186065.1_Kleb_pneu_CHS86_V1	-	CHS86
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.73701	38.1	-	NGMA01	8	2786	2576	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634039	GCA_002140375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/375/GCA_002140375.1_ASM214037v1	-	11F10_MSG5009
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.76428	67.7	-	CIAZ01	671	3771	3158	4/21/15	3/27/17	Scaffold	SC	SAMEA751415	GCA_001332735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/735/GCA_001332735.1_5476_3_10	-	B104
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.77637	31.2	-	FBEN01	38	1874	1770	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683179	GCA_001495795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/795/GCA_001495795.1_SS_2291	-	n/a
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.06766	47.6	-	JUPL01	4233	-	-	7/10/15	7/13/16	Contig	University of Washington	SAMN03198089	GCA_001058735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/735/GCA_001058735.1_ASM105873v1	26230489	883_ECLO
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82714	64.2	-	CSUE01	69	4855	4703	3/24/15	3/18/17	Scaffold	SC	SAMEA1464871	GCA_001213125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/125/GCA_001213125.1_7396_6_65	-	PAP017
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.84038	64.2	-	CSUU01	49	4866	4729	3/24/15	3/18/17	Scaffold	SC	SAMEA1464846	GCA_001213145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/145/GCA_001213145.1_7396_6_82	-	PAP034
Enterobacter cloacae	550	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	7.30706	47.8	-	JUOF01	943	-	-	7/10/15	7/13/16	Contig	University of Washington	SAMN03198120	GCA_001077235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/235/GCA_001077235.1_ASM107723v1	26230489	912_ECLO
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65996	31.4	-	FBIL01	29	1715	1623	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683282	GCA_001495815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/815/GCA_001495815.1_CCN119	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.66228	67.5	-	CVJF01	1065	3739	2932	4/2/15	3/26/17	Scaffold	SC	SAMEA751423	GCA_001332755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/755/GCA_001332755.1_6062_1_11	-	B303
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	3.04524	38.7	-	NGMI01	7	2937	2723	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634035	GCA_002140385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/385/GCA_002140385.1_ASM214038v1	-	11F4_DIV0686
Klebsiella pneumoniae	573	PRJNA291012	291012	Proteobacteria	Gammaproteobacteria	5.67578	57	-	LJCD01	53	5743	5474	11/9/15	2/21/17	Scaffold	Ariel University	SAMN04012157	GCA_001441285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/285/GCA_001441285.1_ASM144128v1	26798092	B86
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.15441	45.2	-	MIUU01	123	4874	4724	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368329	GCA_001727705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/705/GCA_001727705.1_ASM172770v1	-	CDC_K5438
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.13216	28.6	-	CZZK01	601	3771	3648	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664071	GCA_900011905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/905/GCA_900011905.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.02812	47.5	-	CWRS01	53	3832	3667	7/17/15	4/10/17	Scaffold	SC	SAMEA889178	GCA_001252895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/895/GCA_001252895.1_5174_6_1	-	4585
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.13252	68.2	-	CSLL01	68	7345	6871	3/23/15	3/26/17	Scaffold	SC	SAMEA949440	GCA_001207055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/055/GCA_001207055.1_7910_7_5	-	P170/04
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.71439	50.7	-	CXAD01	399	5267	4550	7/16/15	2/24/17	Scaffold	SC	SAMEA2445766	GCA_001257015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/015/GCA_001257015.1_12971_8_74	-	H141040399
Legionella pneumophila W1046	1382367	PRJNA214265	214265	Proteobacteria	Gammaproteobacteria	3.65591	38.2	-	AVAP01	440	-	-	11/27/13	11/27/13	Contig	Queensland Department of Health	SAMN02303044	GCA_000500125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/125/GCA_000500125.1_W1046	-	W1046
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.45826	41.3	-	FIHA01	111	2443	2249	2/10/16	3/19/17	Contig	SC	SAMEA1316592	GCA_900058245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/245/GCA_900058245.1_7114_5_52	-	LSS52
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.11775	35.5	-	MAWL01	47	2194	2073	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481610	GCA_001694355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/355/GCA_001694355.1_ASM169435v1	27411639	BE-PW-118
Acinetobacter baumannii 1062314	1310725	PRJNA194801	194801	Proteobacteria	Gammaproteobacteria	4.04385	39	-	JFDR01	45	3891	3697	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404479	GCA_000584715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/715/GCA_000584715.1_ASM58471v1	-	1062314
Pseudomonas aeruginosa B3-CFI	1365011	PRJEB4312	214879	Proteobacteria	Gammaproteobacteria	6.75191	66.2	-	CBMS01	314	6500	6161	8/11/13	3/15/17	Contig	DTU	SAMEA2271953	GCA_000455425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/425/GCA_000455425.1_B3-CFI	-	B3-CFI
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15716	51.5	-	FEZE01	87	2511	2129	2/9/16	3/21/17	Scaffold	SC	SAMEA2674160	GCA_900026815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/815/GCA_900026815.1_14555_5_21	-	2842STDY5881362
Helicobacter pylori	210	PRJNA362473	362473	Proteobacteria	delta/epsilon subdivisions	1.60451	39.2	-	MWQM01	126	1606	1422	4/14/17	4/19/17	Contig	"MedBiotech laboratory, faculty of medicine and pharmacy, rabat/ Mohamed V university rabat"	SAMN06459527	GCA_002092915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/915/GCA_002092915.1_ASM209291v1	-	HP_106
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.10409	39.6	-	CNQZ02	187	2290	2049	3/23/15	3/11/17	Contig	SC	SAMEA1032708	GCA_001101205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/205/GCA_001101205.2_6999_1_15	-	R34-3198
Escherichia coli EC1735	1005537	PRJNA65943	65943	Proteobacteria	Gammaproteobacteria	5.37045	50.3	-	AMUR01	389	5817	5353	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00808701	GCA_000303615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/615/GCA_000303615.2_ASM30361v2	-	EC1735
Mycobacterium tuberculosis XTB13-250	1427318	PRJNA229716	229716	Terrabacteria group	Actinobacteria	4.42455	65.6	-	JLHG01	9	4311	4101	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419674	GCA_000656195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/195/GCA_000656195.1_Myco_tube_XTB13-250_V1	-	XTB13-250
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.05186	37.8	-	CWKM01	56	3161	3044	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466578	GCA_001494575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/575/GCA_001494575.1_2012_313587_10	-	-
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.7627	30.2	-	CZHJ01	111	1856	1680	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556523	GCA_001407815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/815/GCA_001407815.1_20_S19	-	Campylobacter jejuni
Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054	749949	PRJNA46903	46903	Proteobacteria	Gammaproteobacteria	4.65098	52.2	-	AESO01	89	4722	4418	2/8/11	5/19/17	Contig	FDA	SAMN00710628	GCA_000188475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/475/GCA_000188475.2_ASM18847v2	21345093	NC_MB110209-0054
Staphylococcus aureus M0139	1388544	PRJNA216717	216717	Terrabacteria group	Firmicutes	2.73804	32.8	-	JAZL01	11	2827	2671	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02325668	GCA_000531015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/015/GCA_000531015.1_Stap_aure_M0139_V1	-	M0139
Staphylococcus aureus M0152	1388545	PRJNA216718	216718	Terrabacteria group	Firmicutes	2.87705	32.8	-	JAZK01	15	3025	2865	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325669	GCA_000531035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/035/GCA_000531035.1_Stap_aure_M0152_V1	-	M0152
Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675	749950	PRJNA46905	46905	Proteobacteria	Gammaproteobacteria	4.65074	52.2	-	AESP01	116	4725	4373	2/8/11	5/19/17	Contig	FDA	SAMN00710629	GCA_000188495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/495/GCA_000188495.2_ASM18849v2	21345093	OH_2009072675
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.6543	30.4	-	CZIC01	45	1754	1638	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556545	GCA_001407855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/855/GCA_001407855.1_42_S40	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.02134	37.9	-	CWLI01	112	3159	2964	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466568	GCA_001494975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/975/GCA_001494975.1_2012_281399_15	-	-
Mycobacterium tuberculosis XTB13-251	1427319	PRJNA229717	229717	Terrabacteria group	Actinobacteria	4.42365	65.6	-	JLHF01	4	4306	4110	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419675	GCA_000656215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/215/GCA_000656215.1_Myco_tube_XTB13-251_V1	-	XTB13-251
Escherichia coli N1	1005567	PRJNA66003	66003	Proteobacteria	Gammaproteobacteria	4.95949	50.5	-	AMUQ01	304	5058	4695	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00808700	GCA_000303635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/635/GCA_000303635.2_ASM30363v2	-	N1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0245	39.8	-	CNYW02	166	2183	1977	3/22/15	3/5/17	Contig	SC	SAMEA1463137	GCA_001101225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/225/GCA_001101225.2_7553_4_6	-	ND6118
Helicobacter pylori	210	PRJNA362473	362473	Proteobacteria	delta/epsilon subdivisions	1.60634	39.2	-	MWUG01	122	1608	1424	4/14/17	4/21/17	Contig	"MedBiotech laboratory, faculty of medicine and pharmacy, rabat/ Mohamed V university rabat"	SAMN06459236	GCA_002093735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/735/GCA_002093735.1_ASM209373v1	-	G4
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12723	51.7	-	FFAC01	78	2490	2174	2/9/16	3/19/17	Scaffold	SC	SAMEA2674234	GCA_900026825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/825/GCA_900026825.1_14555_5_47	-	2842STDY5881388
Pseudomonas aeruginosa WC55	1333855	PRJNA202929	202929	Proteobacteria	Gammaproteobacteria	6.84418	66.1	-	ATAQ01	342	6578	6351	8/28/13	3/15/17	Contig	University of Illinois at Chicago	SAMN02471817	GCA_000455705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/705/GCA_000455705.1_ASM45570v1	24092793	WC55
Acinetobacter baumannii 1022959	1310751	PRJNA194827	194827	Proteobacteria	Gammaproteobacteria	4.1501	39.1	-	JFDQ01	136	4127	3806	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404477	GCA_000584735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/735/GCA_000584735.1_ASM58473v1	-	1022959
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.13772	35.5	-	MAWM01	48	2206	2100	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481611	GCA_001694365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/365/GCA_001694365.1_ASM169436v1	27411639	BE-PW-149
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.12156	41.3	-	FIHG01	28	2098	1973	2/10/16	3/19/17	Contig	SC	SAMEA1316620	GCA_900058255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/255/GCA_900058255.1_7114_5_59	-	LSS59
Legionella pneumophila subsp. pneumophila JCM 7571	1236535	PRJDB623	243200	Proteobacteria	Gammaproteobacteria	3.39846	38.2	-	BALD01	62	-	-	4/1/14	9/15/15	Contig	The University of Tokyo	SAMD00009799	GCA_000614785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/785/GCA_000614785.1_ASM61478v1	-	JCM 7571
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.69275	50.8	-	CXHM01	393	5282	4511	7/17/15	2/24/17	Scaffold	SC	SAMEA2003846	GCA_001257055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/055/GCA_001257055.1_8289_7_40	-	75668
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.0815	68.2	-	CSQA01	67	7304	6782	3/23/15	3/26/17	Scaffold	SC	SAMEA807021	GCA_001207675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/675/GCA_001207675.1_7909_4_33	-	C66
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.06901	47.4	-	CWRJ01	40	3850	3709	7/17/15	3/26/17	Scaffold	SC	SAMEA889324	GCA_001253035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/035/GCA_001253035.1_5174_5_1	-	1346
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.16905	28.7	-	CZZM01	784	3779	3642	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664072	GCA_900011915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/915/GCA_900011915.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.07402	45.3	-	MISR01	94	4813	4651	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368279	GCA_001727725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/725/GCA_001727725.1_ASM172772v1	-	CDC_K4557
Klebsiella pneumoniae	573	PRJNA291012	291012	Proteobacteria	Gammaproteobacteria	5.74844	56.7	-	LJCB01	88	5796	5494	11/9/15	2/21/17	Scaffold	Ariel University	SAMN03938576	GCA_001441295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/295/GCA_001441295.1_ASM144129v1	26798092	B199
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.66276	38.7	-	NGML01	7	2672	2444	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634055	GCA_002140415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/415/GCA_002140415.1_ASM214041v1	-	11F9_MSG5001_a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.69393	67.5	-	CVJG01	1082	3778	2962	4/2/15	3/26/17	Scaffold	SC	SAMEA751425	GCA_001332795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/795/GCA_001332795.1_6062_1_1	-	B293
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65942	31.4	-	FBHP01	24	1724	1629	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683263	GCA_001495835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/835/GCA_001495835.1_EC3490	-	n/a
Enterobacter cloacae	550	PRJNA394064	394064	Proteobacteria	Gammaproteobacteria	4.89993	55	-	NQLK01	2356	6198	5834	8/28/17	8/28/17	Contig	Laboratorio Nacional de Computacao Cientifica	SAMN07348289	GCA_002271365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/365/GCA_002271365.1_ASM227136v1	-	UENF P7
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.27766	64	-	CSUI01	20	5318	5133	3/24/15	3/18/17	Scaffold	SC	SAMEA1464924	GCA_001213165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/165/GCA_001213165.1_7396_6_70	-	PAP022
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.88375	64.1	-	CSTT01	29	4938	4758	3/24/15	3/18/17	Scaffold	SC	SAMEA1464881	GCA_001213185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/185/GCA_001213185.1_7396_6_54	-	PAP006
Enterobacter cloacae	550	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.70835	54.5	-	DCMP01	121	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454491	GCA_002321475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/475/GCA_002321475.1_ASM232147v1	28894102	-
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.63935	31.4	-	FBLA01	14	1691	1595	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683352	GCA_001495855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/855/GCA_001495855.1_p588D	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.81043	67.9	-	CVIY01	370	3695	3281	4/2/15	3/26/17	Scaffold	SC	SAMEA751430	GCA_001332835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/835/GCA_001332835.1_6062_3_12	-	B292
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.54605	38.2	-	NGLW01	4	2584	2404	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634031	GCA_002140435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/435/GCA_002140435.1_ASM214043v1	-	1B12_DIV0542
Klebsiella pneumoniae	573	PRJNA272089	272089	Proteobacteria	Gammaproteobacteria	5.40148	57.2	-	LRQC01	135	5391	5150	2/2/16	2/25/17	Scaffold	The Genome Institute at Washington University	SAMN03854350	GCA_001546515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/515/GCA_001546515.1_ASM154651v1	-	MJR8396D
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.03201	45.3	-	MISS01	120	4801	4629	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368280	GCA_001727735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/735/GCA_001727735.1_ASM172773v1	-	CDC_K4558G
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.23194	28.8	-	CZZO01	386	3939	3823	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664073	GCA_900011925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/925/GCA_900011925.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.02808	47.5	-	CWRW01	51	3829	3674	7/16/15	3/26/17	Scaffold	SC	SAMEA889182	GCA_001253055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/055/GCA_001253055.1_5174_6_5	-	4600
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.19854	68.2	-	CSKO01	77	7458	6963	3/23/15	3/26/17	Scaffold	SC	SAMEA949360	GCA_001207785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/785/GCA_001207785.1_6998_1_17	-	EY2
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.8239	50.7	-	CWUT01	388	5405	4638	7/16/15	2/24/17	Scaffold	SC	SAMEA3345060	GCA_001257135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/135/GCA_001257135.1_Sg_201311838_TAATCG_L001	-	201311838_1
Legionella pneumophila serogroup 1	66976	PRJEB5317	238639	Proteobacteria	Gammaproteobacteria	3.86584	38.5	-	CCAA01	48	-	-	5/12/14	1/30/15	Contig	UL	SAMEA3139058	GCA_000724005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/724/005/GCA_000724005.1_Legionellapneumophila_strQuebec2012_sampleID120371	-	Quebec 2012
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.03346	41.2	-	FIHK01	21	2036	1924	2/10/16	3/19/17	Contig	SC	SAMEA1316641	GCA_900058265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/265/GCA_900058265.1_7114_5_62	-	LSS62
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.16568	35.5	-	MAWN01	81	2241	2119	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481612	GCA_001694395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/395/GCA_001694395.1_ASM169439v1	27411639	BE-PW-150
Acinetobacter baumannii 1482820	1310716	PRJNA194792	194792	Proteobacteria	Gammaproteobacteria	4.01084	39.3	-	JFEK01	96	3947	3667	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404525	GCA_000584755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/755/GCA_000584755.1_ASM58475v1	-	1482820
Pseudomonas aeruginosa DHS29	1411701	PRJNA224150	224150	Proteobacteria	Gammaproteobacteria	7.10832	65.8	-	AYON01	267	6991	6683	12/3/13	3/15/17	Contig	Hospital of Besancon - France	SAMN02469588	GCA_000503175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/175/GCA_000503175.1_Assembly_DHS29_of_Sep_2013	24874685	DHS29
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.18897	51.6	-	FFAE01	86	2532	2181	2/9/16	3/21/17	Scaffold	SC	SAMEA2674236	GCA_900026835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/835/GCA_900026835.1_14555_5_48	-	2842STDY5881389
Helicobacter pylori SS1	102617	PRJNA230061	230061	Proteobacteria	delta/epsilon subdivisions	1.60419	39	-	AZBP01	61	1616	1461	5/18/17	5/24/17	Contig	Aarhus University	SAMN06186787	GCA_002148385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/385/GCA_002148385.1_ASM214838v1	-	SS1
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.19779	39.5	-	CPQH01	82	2418	2181	3/23/15	3/11/17	Contig	SC	SAMEA1020596	GCA_001101245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/245/GCA_001101245.1_6569_4_8	-	PT76
Escherichia coli 07798	1005566	PRJNA66001	66001	Proteobacteria	Gammaproteobacteria	4.90437	50.6	-	AMUP01	224	5248	4829	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00808699	GCA_000303655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/655/GCA_000303655.2_ASM30365v2	-	7798
Mycobacterium tuberculosis XTB13-252	1427320	PRJNA229718	229718	Terrabacteria group	Actinobacteria	4.43652	65.5	-	JLHE01	8	4320	4102	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419676	GCA_000656235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/235/GCA_000656235.1_Myco_tube_XTB13-252_V1	-	XTB13-252
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.07796	37.9	-	CWLM01	93	3150	3018	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466594	GCA_001495075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/075/GCA_001495075.1_2012_326368_12	-	-
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.64074	30.4	-	CZHO01	40	1735	1605	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556548	GCA_001407895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/895/GCA_001407895.1_45_S43	-	Campylobacter jejuni
Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965	749951	PRJNA46907	46907	Proteobacteria	Gammaproteobacteria	4.74289	52.1	-	AESQ01	69	4834	4559	2/8/11	5/19/17	Contig	FDA	SAMN00710596	GCA_000188515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/515/GCA_000188515.2_ASM18851v2	21345093	CASC_09SCPH15965
Staphylococcus aureus M0167	1388546	PRJNA216719	216719	Terrabacteria group	Firmicutes	2.87728	32.8	-	JAZJ01	15	3029	2860	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325670	GCA_000531065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/065/GCA_000531065.1_Stap_aure_M0167_V1	-	M0167
Staphylococcus aureus M0176	1388547	PRJNA216720	216720	Terrabacteria group	Firmicutes	2.91561	33	-	JAZI01	14	3059	2894	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325671	GCA_000531115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/115/GCA_000531115.1_Stap_aure_M0176_V1	-	M0176
Salmonella enterica subsp. enterica serovar Montevideo str. 19N	763919	PRJNA48457	48457	Proteobacteria	Gammaproteobacteria	4.64645	52.2	-	AESV01	60	4711	4470	2/8/11	5/19/17	Contig	FDA	SAMN00710598	GCA_000188535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/535/GCA_000188535.2_ASM18853v2	22260654	19N
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.61217	30.5	-	CZHZ01	36	1682	1574	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556513	GCA_001407915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/915/GCA_001407915.1_10_S9	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.78121	36.6	-	CWML01	86	2650	2509	12/12/15	4/11/17	Contig	IZSLER	SAMEA3466598	GCA_001495195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/195/GCA_001495195.1_2013_138242	-	-
Mycobacterium tuberculosis XTB13-253	1427321	PRJNA229719	229719	Terrabacteria group	Actinobacteria	4.4088	65.5	-	JLHD01	5	4280	4093	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419677	GCA_000656255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/255/GCA_000656255.1_Myco_tube_XTB13-253_V1	-	XTB13-253
Escherichia coli PA38	1005506	PRJNA65881	65881	Proteobacteria	Gammaproteobacteria	5.26508	50.4	-	AMUO01	578	5691	5215	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00794576	GCA_000303675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/675/GCA_000303675.2_ASM30367v2	-	PA38
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.21874	39.5	-	CMTS01	79	2409	2127	3/22/15	3/11/17	Contig	SC	SAMEA1022931	GCA_001101265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/265/GCA_001101265.1_5737_3_2	-	30973
Helicobacter pylori	210	PRJNA362473	362473	Proteobacteria	delta/epsilon subdivisions	1.6276	39.3	-	MUHJ01	101	1620	1440	5/22/17	5/24/17	Contig	"MedBiotech laboratory, faculty of medicine and pharmacy, rabat/ Mohamed V university rabat"	SAMN06276721	GCA_002154535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/535/GCA_002154535.1_ASM215453v1	-	HP_PWs
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.20259	51.5	-	FFAQ01	72	2559	2210	2/9/16	3/19/17	Scaffold	SC	SAMEA2674260	GCA_900026845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/845/GCA_900026845.1_14555_5_60	-	2842STDY5881401
Pseudomonas aeruginosa ATCC 15442	1424337	PRJNA228962	228962	Proteobacteria	Gammaproteobacteria	6.77059	66.2	-	AYUC01	200	6553	6338	12/6/13	3/15/17	Contig	"State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University"	SAMN02404646	GCA_000504485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/504/485/GCA_000504485.1_ATCC15442	24786961	ATCC 15442
Acinetobacter baumannii 1471012	1310713	PRJNA194789	194789	Proteobacteria	Gammaproteobacteria	3.93637	39	-	JFEH01	134	3915	3627	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404523	GCA_000584775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/775/GCA_000584775.1_ASM58477v1	-	1471012
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.02295	35.2	-	MAWQ01	55	2074	1958	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481615	GCA_001694425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/425/GCA_001694425.1_ASM169442v1	27411639	BG-PW-065
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.03838	41.2	-	FINC01	22	2042	1932	2/10/16	3/19/17	Contig	SC	SAMEA1566175	GCA_900058275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/275/GCA_900058275.1_8337_6_26	-	BM329B
Legionella pneumophila	446	PRJEB1828	268747	Proteobacteria	Gammaproteobacteria	3.56336	36.9	-	FJOE01	323	3067	3037	3/4/16	3/4/16	Scaffold	SC	SAMEA1487524	GCA_900072995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/072/995/GCA_900072995.1_ST1_cam	-	LP_423
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.88389	50.5	-	CWZW01	436	5478	4705	7/16/15	2/24/17	Scaffold	SC	SAMEA2445758	GCA_001257155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/155/GCA_001257155.1_12971_8_67	-	H134480102
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	6.98113	68.3	-	CSKQ01	70	7206	6729	3/23/15	3/26/17	Scaffold	SC	SAMEA1483586	GCA_001208265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/265/GCA_001208265.1_7910_5_11	-	107
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.98202	47.5	-	CWNX01	76	3763	3503	7/16/15	3/26/17	Scaffold	SC	SAMEA889310	GCA_001253155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/155/GCA_001253155.1_4056_6_4	-	A154
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.19384	28.8	-	CZZT01	778	3783	3641	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664080	GCA_900011955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/955/GCA_900011955.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.33559	45.1	-	MIST01	155	5056	4884	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368281	GCA_001727745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/745/GCA_001727745.1_ASM172774v1	-	CDC_K4558W
Klebsiella pneumoniae	573	PRJNA312481	312481	Proteobacteria	Gammaproteobacteria	5.85766	56.8	-	LSTN01	210	6013	5558	2/25/16	2/21/17	Scaffold	Umm Al-Qura University	SAMN04498375	GCA_001574505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/574/505/GCA_001574505.1_ASM157450v1	-	U41
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.77168	38.2	-	NGLX01	8	2749	2546	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634014	GCA_002140455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/455/GCA_002140455.1_ASM214045v1	-	1A3_DIV0608
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.64334	67.4	-	CVJJ01	1205	3743	2845	4/2/15	3/27/17	Scaffold	SC	SAMEA751432	GCA_001332875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/875/GCA_001332875.1_6062_3_10	-	B290
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.72467	31.2	-	FBGW01	18	1805	1712	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683243	GCA_001495875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/875/GCA_001495875.1_CCN245	-	n/a
Enterobacter cloacae	550	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.75788	55.1	-	DCLY01	67	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456999	GCA_002321755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/755/GCA_002321755.1_ASM232175v1	28894102	-
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.25202	64.1	-	CSTO01	13	5298	5183	3/24/15	3/18/17	Scaffold	SC	SAMEA1464973	GCA_001213205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/205/GCA_001213205.1_7396_6_49	-	PAP001
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.39581	64	-	CSVA01	38	5477	5268	3/24/15	3/18/17	Scaffold	SC	SAMEA1464887	GCA_001213225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/225/GCA_001213225.1_7396_6_88	-	PAP040
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.6595	31.4	-	FBMG01	39	1715	1616	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683385	GCA_001495895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/895/GCA_001495895.1_UNF5421c	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.7949	67.8	-	CFWO01	596	3794	3191	3/15/15	3/26/17	Scaffold	SC	SAMEA751433	GCA_001332895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/895/GCA_001332895.1_6062_3_9	-	B064
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.74151	38.3	-	NGLV01	14	2736	2515	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634041	GCA_002140475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/475/GCA_002140475.1_ASM214047v1	-	1B3_DIV609
Klebsiella pneumoniae	573	PRJNA313004	313004	Proteobacteria	Gammaproteobacteria	5.5467	57.4	-	LUVP01	64	5645	5402	4/7/16	2/21/17	Scaffold	Chinese Center for Disease Control and Prevention	SAMN04532799	GCA_001613565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/565/GCA_001613565.1_ASM161356v1	-	TR191
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.01434	45.4	-	MISU01	118	4749	4542	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368282	GCA_001727775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/775/GCA_001727775.1_ASM172777v1	-	CDC_K4588
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.15707	28.5	-	CZZW01	321	3795	3681	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664082	GCA_900011965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/965/GCA_900011965.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.00067	47.4	-	CWSI01	52	3818	3653	7/16/15	3/26/17	Scaffold	SC	SAMEA889255	GCA_001253235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/235/GCA_001253235.1_5174_8_1	-	A29
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.09182	68.2	-	CSSE01	72	7314	6790	3/22/15	3/26/17	Scaffold	SC	SAMEA807029	GCA_001208545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/545/GCA_001208545.1_7907_5_13	-	C13
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.72668	50.7	-	CXJL01	403	5333	4556	7/16/15	2/24/17	Scaffold	SC	SAMEA2004859	GCA_001257175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/175/GCA_001257175.1_8290_4_11	-	95014
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05396	41.2	-	FIPS01	26	2055	1958	2/10/16	3/19/17	Contig	SC	SAMEA1566163	GCA_900058285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/285/GCA_900058285.1_8525_5_31	-	SS26
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.19468	35.4	-	MAWR01	61	2226	2134	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481616	GCA_001694435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/435/GCA_001694435.1_ASM169443v1	27411639	CZ-NI-016
Acinetobacter baumannii 1475764	1310718	PRJNA194794	194794	Proteobacteria	Gammaproteobacteria	3.9981	39.3	-	JFEJ01	126	3953	3688	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404524	GCA_000584835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/835/GCA_000584835.1_ASM58483v1	-	1475764
Pseudomonas aeruginosa JD315	1403034	PRJNA198782	198782	Proteobacteria	Gammaproteobacteria	6.39216	66.5	-	AWYN01	1913	6561	5604	12/11/13	3/9/17	Contig	University of Ottawa	SAMN02360639	GCA_000505985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/985/GCA_000505985.1_JD315.contigs	24324153	JD315
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.1933	51.5	-	FFBL01	109	2548	2180	2/9/16	3/21/17	Scaffold	SC	SAMEA2674302	GCA_900026855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/855/GCA_900026855.1_14555_5_81	-	2842STDY5881422
Helicobacter pylori	210	PRJNA374470	374470	Proteobacteria	delta/epsilon subdivisions	1.62504	38.9	-	MVFB01	38	1617	1450	6/13/17	6/15/17	Contig	The University of Western Australia	SAMN06323839	GCA_002191215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/215/GCA_002191215.1_ASM219121v1	-	OND1954
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.08675	39.6	-	CMQB01	52	2286	2009	3/23/15	3/11/17	Contig	SC	SAMEA2061942	GCA_001101285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/285/GCA_001101285.1_9803_7_80	-	type strain: N
Escherichia coli PA34	1005505	PRJNA65879	65879	Proteobacteria	Gammaproteobacteria	5.38114	50.3	-	AMTR01	354	5794	5331	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00794575	GCA_000303695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/695/GCA_000303695.2_ASM30369v2	-	PA34
Mycobacterium tuberculosis XTB13-255	1427322	PRJNA229720	229720	Terrabacteria group	Actinobacteria	4.39165	65.6	-	JLHC01	9	4268	4094	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419678	GCA_000656275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/275/GCA_000656275.1_Myco_tube_XTB13-255_V1	-	XTB13-255
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.06201	37.8	-	CWLT01	47	3164	3046	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466555	GCA_001495255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/255/GCA_001495255.1_2011_171339_19	-	-
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.65527	30.5	-	CZJD01	38	1724	1619	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556554	GCA_001407935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/935/GCA_001407935.1_52_S50	-	Campylobacter jejuni
Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01	766762	PRJNA49129	49129	Proteobacteria	Gammaproteobacteria	4.65017	52.2	-	AESZ01	39	4704	4472	2/8/11	5/19/17	Contig	FDA	SAMN00710599	GCA_000188555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/555/GCA_000188555.2_ASM18855v2	21345093	81038-01
Staphylococcus aureus M0190	1388548	PRJNA216721	216721	Terrabacteria group	Firmicutes	2.88777	33	-	JAZH01	13	3008	2838	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02325672	GCA_000531155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/155/GCA_000531155.1_Stap_aure_M0190_V1	-	M0190
Staphylococcus aureus M0195	1388549	PRJNA216722	216722	Terrabacteria group	Firmicutes	2.90781	33	-	JAZG01	22	3035	2874	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02325673	GCA_000531215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/215/GCA_000531215.1_Stap_aure_M0195_V1	-	M0195
Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507	789332	PRJNA49405	49405	Proteobacteria	Gammaproteobacteria	4.64872	52.2	-	AETA01	44	4703	4478	2/8/11	5/19/17	Contig	FDA	SAMN00710597	GCA_000188575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/575/GCA_000188575.2_ASM18857v2	21345093	MD_MDA09249507
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.67112	30.4	-	CZHY01	42	1764	1647	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556520	GCA_001407955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/955/GCA_001407955.1_17_S16	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.01485	37.9	-	CWKZ01	116	3100	2982	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466548	GCA_001495355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/355/GCA_001495355.1_2012_156584_13	-	-
Mycobacterium tuberculosis XTB13-256	1427323	PRJNA229721	229721	Terrabacteria group	Actinobacteria	4.42269	65.6	-	JLHB01	7	4314	4110	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419679	GCA_000656295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/295/GCA_000656295.1_Myco_tube_XTB13-256_V1	-	XTB13-256
Escherichia coli FDA506	1005474	PRJNA65761	65761	Proteobacteria	Gammaproteobacteria	5.33114	50.2	-	AMTS01	349	5686	5264	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00794577	GCA_000303715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/715/GCA_000303715.2_ASM30371v2	-	FDA506
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.03405	39.6	-	CNWA02	125	2210	2001	3/23/15	3/5/17	Contig	SC	SAMEA1032666	GCA_001101345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/345/GCA_001101345.2_7001_1_14	-	R34-3091
Helicobacter pylori C664	1225175	PRJNA173201	173201	Proteobacteria	delta/epsilon subdivisions	1.63154	38.7	-	AMFC01	30	1610	1456	6/20/17	6/22/17	Contig	"Zhejiang-California International Nanosystems Institute (ZCNI), Zhejiang University"	SAMN03013094	GCA_002203985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/203/985/GCA_002203985.1_HpC664v1.0	-	C664
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.18465	51.4	-	FFCE01	103	2529	2175	2/9/16	3/19/17	Scaffold	SC	SAMEA2674132	GCA_900026865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/865/GCA_900026865.1_14555_6_5	-	2842STDY5881442
Pseudomonas aeruginosa JD323	1403040	PRJNA198782	198782	Proteobacteria	Gammaproteobacteria	5.98254	66.6	-	AWYW01	1965	6145	5191	12/11/13	3/15/17	Contig	University of Ottawa	SAMN02360645	GCA_000506025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/025/GCA_000506025.1_JD323.contigs	24324153	JD323
Acinetobacter baumannii 1533268	1310721	PRJNA194797	194797	Proteobacteria	Gammaproteobacteria	3.88376	39	-	JFEI01	34	3726	3531	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404526	GCA_000584855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/855/GCA_000584855.1_ASM58485v1	-	1533268
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.10227	35.5	-	MAWS01	35	2151	2048	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481617	GCA_001694475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/475/GCA_001694475.1_ASM169447v1	27411639	CZ-PW-017
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.07361	41.2	-	FIQJ01	21	2099	1988	2/10/16	3/19/17	Contig	SC	SAMEA1566158	GCA_900058295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/295/GCA_900058295.1_8525_5_46	-	SS47
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.69052	50.7	-	CWZU01	388	5208	4519	7/16/15	2/24/17	Scaffold	SC	SAMEA2445683	GCA_001257195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/195/GCA_001257195.1_12971_8_7	-	H081680151
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.02819	68.3	-	CSLF01	77	7284	6781	3/23/15	3/26/17	Scaffold	SC	SAMEA949385	GCA_001209045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/045/GCA_001209045.1_7910_7_2	-	EY10
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.00976	47.5	-	CWOK01	85	3769	3301	7/16/15	3/26/17	Scaffold	SC	SAMEA889343	GCA_001253295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/295/GCA_001253295.1_4056_6_9	-	A185
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.19796	28.6	-	FAAA01	261	3894	3778	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664085	GCA_900011975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/975/GCA_900011975.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.34095	45.1	-	MISV01	138	5080	4890	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN03358827	GCA_001727805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/805/GCA_001727805.1_ASM172780v1	-	CDC_K4636
Klebsiella pneumoniae	573	PRJNA313004	313004	Proteobacteria	Gammaproteobacteria	5.55029	57.4	-	LUVS01	60	5648	5406	4/7/16	2/21/17	Scaffold	Chinese Center for Disease Control and Prevention	SAMN04534540	GCA_001613575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/575/GCA_001613575.1_ASM161357v1	-	TRqt-41
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.76001	38	-	NGLU01	6	2798	2600	5/16/17	5/24/17	Scaffold	Broad Institute	SAMN04634011	GCA_002140515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/515/GCA_002140515.1_ASM214051v1	-	1C8_DIV0465
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.75864	67.7	-	CFXE01	891	3770	3104	3/15/15	3/27/17	Scaffold	SC	SAMEA751434	GCA_001332915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/915/GCA_001332915.1_5601_5_2	-	B314
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.72877	31.1	-	FBMR01	64	1744	1641	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683395	GCA_001495915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/915/GCA_001495915.1_CCN398	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.8398	64.2	-	CSUQ01	50	4871	4728	3/24/15	3/18/17	Scaffold	SC	SAMEA1464866	GCA_001213245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/245/GCA_001213245.1_7396_6_75	-	PAP027
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23091	64	-	CSVU01	48	5278	5082	3/24/15	3/18/17	Scaffold	SC	SAMEA1464910	GCA_001213285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/285/GCA_001213285.1_7396_7_21	-	PAP069
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.57554	31.7	-	FBJZ01	19	1579	1518	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683327	GCA_001495955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/955/GCA_001495955.1_H085160742	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.75231	67.7	-	CIBK01	601	3744	3132	4/21/15	3/27/17	Scaffold	SC	SAMEA751446	GCA_001333035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/035/GCA_001333035.1_5601_8_5	-	B266
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.93381	38.4	-	NGLR01	10	2956	2706	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634040	GCA_002140535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/535/GCA_002140535.1_ASM214053v1	-	2B3_DIV0609
Klebsiella pneumoniae	573	PRJNA313004	313004	Proteobacteria	Gammaproteobacteria	5.54151	57.4	-	LUVQ01	69	5647	5395	4/7/16	2/21/17	Scaffold	Chinese Center for Disease Control and Prevention	SAMN04532839	GCA_001613585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/585/GCA_001613585.1_ASM161358v1	-	TRqt-37
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.16338	45.3	-	MISW01	150	4903	4764	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN03358828	GCA_001727815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/815/GCA_001727815.1_ASM172781v1	-	CDC_K4637G
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.26632	29	-	FAAE01	1667	3868	3613	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664089	GCA_900011985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/985/GCA_900011985.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.91972	47.9	-	CWRA01	254	3694	3062	7/16/15	3/26/17	Scaffold	SC	SAMEA889169	GCA_001253315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/315/GCA_001253315.1_4075_3_7	-	GP140
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.00637	68.3	-	CSLO01	71	7219	6756	3/23/15	3/26/17	Scaffold	SC	SAMEA949424	GCA_001209325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/325/GCA_001209325.1_7910_7_10	-	SW9
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.66099	50.7	-	CXGI01	391	5043	4506	7/17/15	2/24/17	Scaffold	SC	SAMEA1013601	GCA_001257235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/235/GCA_001257235.1_6551_1_7	-	SS127858_2798529
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.06956	41.3	-	FIQI01	20	2097	1984	2/10/16	3/19/17	Contig	SC	SAMEA1566197	GCA_900058305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/305/GCA_900058305.1_8525_5_48	-	SS65
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.19034	35.4	-	MAWU01	56	2223	2129	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481619	GCA_001694495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/495/GCA_001694495.1_ASM169449v1	27411639	CZ-PW-150
Acinetobacter baumannii 273929	1310738	PRJNA194814	194814	Proteobacteria	Gammaproteobacteria	3.95232	39.1	-	JFEO01	115	3942	3625	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404530	GCA_000584875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/875/GCA_000584875.1_ASM58487v1	-	273929
Pseudomonas aeruginosa JD326	1403043	PRJNA198782	198782	Proteobacteria	Gammaproteobacteria	6.44749	66.5	-	AWYZ01	1982	6613	5611	12/11/13	3/9/17	Contig	University of Ottawa	SAMN02360648	GCA_000506045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/045/GCA_000506045.1_JD326.contigs	24324153	JD326
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11263	51.8	-	FFCH01	82	2417	2079	2/9/16	3/21/17	Scaffold	SC	SAMEA2674145	GCA_900026875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/875/GCA_900026875.1_14555_6_9	-	2842STDY5881446
Helicobacter pylori C333	1225482	PRJNA173329	173329	Proteobacteria	delta/epsilon subdivisions	1.60224	38.6	-	AMFG01	20	1576	1418	6/20/17	6/22/17	Contig	"Zhejiang-California International Nanosystems Institute (ZCNI), Zhejiang University"	SAMN03013095	GCA_002204015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/015/GCA_002204015.1_HpC333v1.0	-	C333
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05693	39.7	-	CNUV02	182	2239	2009	3/22/15	3/11/17	Contig	SC	SAMEA1032701	GCA_001101385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/385/GCA_001101385.2_6999_6_19	-	306435
Escherichia coli FDA507	1005472	PRJNA65757	65757	Proteobacteria	Gammaproteobacteria	5.37201	50.3	-	AMTT01	402	5804	5361	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00794578	GCA_000303735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/735/GCA_000303735.2_ASM30373v2	-	FDA507
Mycobacterium tuberculosis XTB13-262	1427324	PRJNA229722	229722	Terrabacteria group	Actinobacteria	4.42903	65.6	-	JLHA01	2	4312	4115	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419680	GCA_000656315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/315/GCA_000656315.1_Myco_tube_XTB13-262_V1	-	XTB13-262
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.01997	37.9	-	CWMK01	247	3100	2915	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466596	GCA_001495455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/455/GCA_001495455.1_2012_252653	-	-
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.61118	30.5	-	CZHP01	53	1673	1569	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556535	GCA_001407975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/975/GCA_001407975.1_31_S30	-	Campylobacter jejuni
Salmonella enterica subsp. enterica serovar Montevideo str. 414877	858313	PRJNA49987	49987	Proteobacteria	Gammaproteobacteria	4.65138	52.2	-	AETB01	46	4703	4472	2/8/11	5/19/17	Contig	FDA	SAMN00710600	GCA_000188595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/595/GCA_000188595.2_ASM18859v2	21345093	414877
Staphylococcus aureus M0222	1388550	PRJNA216723	216723	Terrabacteria group	Firmicutes	2.93261	33	-	JAZF01	17	3086	2925	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02325674	GCA_000531265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/265/GCA_000531265.1_Stap_aure_M0222_V1	-	M0222
Staphylococcus aureus M0238	1388551	PRJNA216724	216724	Terrabacteria group	Firmicutes	2.91192	32.9	-	JAZE01	14	3071	2911	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02325675	GCA_000531325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/325/GCA_000531325.1_Stap_aure_M0238_V1	-	M0238
Salmonella enterica subsp. enterica serovar Montevideo str. 366867	858314	PRJNA49989	49989	Proteobacteria	Gammaproteobacteria	4.66005	52.2	-	AETC01	37	4718	4481	2/8/11	5/19/17	Contig	FDA	SAMN00710601	GCA_000188615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/615/GCA_000188615.2_ASM18861v2	21345093	366867
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.58754	30.5	-	CZJE01	37	1658	1556	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556555	GCA_001407995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/995/GCA_001407995.1_53_S51	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.98613	37.9	-	CWKN01	43	3018	2904	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466582	GCA_001495495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/495/GCA_001495495.1_2012_313587_2	-	-
Mycobacterium tuberculosis XTB13-265	1427325	PRJNA229723	229723	Terrabacteria group	Actinobacteria	4.4225	65.6	-	JLGZ01	3	4305	4120	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419681	GCA_000656335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/335/GCA_000656335.1_Myco_tube_XTB13-265_V1	-	XTB13-265
Escherichia coli FDA504	1005470	PRJNA65753	65753	Proteobacteria	Gammaproteobacteria	5.29242	50.3	-	AMTU01	352	5681	5263	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00794580	GCA_000303755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/755/GCA_000303755.2_ASM30375v2	-	FDA504
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11187	39.4	-	CLCQ01	67	2357	2126	3/21/15	3/11/17	Contig	SC	SAMEA1025824	GCA_001101425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/425/GCA_001101425.1_6899_4_18	-	SMRU2034
Helicobacter pylori PMSS1	1431450	PRJNA230060	230060	Proteobacteria	delta/epsilon subdivisions	1.59002	39	-	AZBR01	26	1568	1425	6/27/17	6/29/17	Contig	Aarhus University	SAMN04328852	GCA_002209285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/285/GCA_002209285.1_ASM220928v1	-	PMSS1
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.13448	51.7	-	FFEB01	75	2499	2162	2/9/16	3/21/17	Scaffold	SC	SAMEA2674297	GCA_900026885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/885/GCA_900026885.1_14555_6_72	-	2842STDY5881509
Pseudomonas aeruginosa JD328	1403044	PRJNA198782	198782	Proteobacteria	Gammaproteobacteria	6.33026	66.5	-	AWZA01	1851	6413	5509	12/11/13	3/15/17	Contig	University of Ottawa	SAMN02360649	GCA_000506065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/065/GCA_000506065.1_JD328.contigs	24324153	JD328
Acinetobacter baumannii 23671	1310729	PRJNA194805	194805	Proteobacteria	Gammaproteobacteria	4.08977	39.1	-	JFEN01	134	4059	3773	3/3/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02404529	GCA_000584895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/895/GCA_000584895.1_ASM58489v1	-	23671
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.20371	35.4	-	MAWX01	80	2335	2186	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481622	GCA_001694515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/515/GCA_001694515.1_ASM169451v1	27411639	DK-PW-096
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.03695	41.2	-	FITE01	20	2045	1932	2/10/16	3/19/17	Contig	SC	SAMEA1566147	GCA_900058315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/315/GCA_900058315.1_8525_5_11	-	FX478
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.61332	50.6	-	CWZS01	503	5088	4340	7/16/15	2/24/17	Scaffold	SC	SAMEA2445678	GCA_001257275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/275/GCA_001257275.1_12971_8_5	-	H064400341
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.10238	68.2	-	CSPA01	67	7303	6767	3/23/15	3/26/17	Scaffold	SC	SAMEA807031	GCA_001209405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/405/GCA_001209405.1_7907_5_15	-	C15
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.95186	47.5	-	CWNN01	84	3752	3502	7/17/15	3/26/17	Scaffold	SC	SAMEA889228	GCA_001253575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/575/GCA_001253575.1_4056_2_8	-	GP8
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.23596	29	-	FAAH01	1327	3827	3668	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664090	GCA_900011995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/995/GCA_900011995.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.15641	45.3	-	MISX01	133	4904	4760	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN03358829	GCA_001727825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/825/GCA_001727825.1_ASM172782v1	-	CDC_K4637W
Klebsiella pneumoniae	573	PRJNA313004	313004	Proteobacteria	Gammaproteobacteria	5.54441	57.4	-	LUVR01	72	5636	5411	4/7/16	2/21/17	Scaffold	Chinese Center for Disease Control and Prevention	SAMN04534539	GCA_001613595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/595/GCA_001613595.1_ASM161359v1	-	TR198
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.64995	38.3	-	NGLQ01	5	2712	2451	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634030	GCA_002140555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/555/GCA_002140555.1_ASM214055v1	-	2D4_DIV0473
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.69571	67.5	-	CFWR01	785	3729	2986	3/15/15	3/27/17	Scaffold	SC	SAMEA751447	GCA_001333055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/055/GCA_001333055.1_5515_6_7	-	B127
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.6491	31.4	-	FBPG01	28	1688	1588	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683463	GCA_001495975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/975/GCA_001495975.1_H134460277	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.88269	64.1	-	CSUC01	13	4879	4740	3/24/15	3/18/17	Scaffold	SC	SAMEA1464838	GCA_001213305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/305/GCA_001213305.1_7396_6_63	-	PAP015
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.85485	64.2	-	CSUK01	66	4890	4725	3/24/15	3/18/17	Scaffold	SC	SAMEA1464955	GCA_001213325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/325/GCA_001213325.1_7396_6_72	-	PAP024
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68417	31.3	-	FBLI01	15	1742	1647	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683360	GCA_001495995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/495/995/GCA_001495995.1_SWAN195-3	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.75206	67.7	-	CFWM01	742	3774	3129	3/15/15	3/27/17	Scaffold	SC	SAMEA751449	GCA_001333075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/075/GCA_001333075.1_5515_6_3	-	B122
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	3.01337	39.1	-	NGLM01	42	2895	2643	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634033	GCA_002140595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/595/GCA_002140595.1_ASM214059v1	-	2G6_DIV0578
Klebsiella pneumoniae	573	PRJNA313004	313004	Proteobacteria	Gammaproteobacteria	5.54502	57.3	-	LUVU01	75	5646	5405	4/7/16	2/21/17	Scaffold	Chinese Center for Disease Control and Prevention	SAMN04534542	GCA_001613645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/645/GCA_001613645.1_ASM161364v1	-	TRqt-49
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.07733	45.3	-	MISY01	96	4784	4632	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368283	GCA_001727845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/845/GCA_001727845.1_ASM172784v1	-	CDC_K4638
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.27979	29	-	FAAN01	1540	3889	3639	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664097	GCA_900012025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/025/GCA_900012025.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.00234	47.4	-	CWSK01	48	3815	3666	7/17/15	3/26/17	Scaffold	SC	SAMEA889253	GCA_001253695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/695/GCA_001253695.1_5174_8_2	-	A31
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08587	68.2	-	CSOU01	67	7312	6783	3/22/15	3/26/17	Scaffold	SC	SAMEA807049	GCA_001209505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/505/GCA_001209505.1_7907_5_21	-	C21
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.76958	50.7	-	CWWH01	394	5346	4562	7/16/15	2/24/17	Scaffold	SC	SAMEA3345099	GCA_001257295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/295/GCA_001257295.1_Sg_201405079_CATGGC_L001	-	201405079_1
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04609	41.1	-	FITK01	26	2070	1944	2/10/16	3/19/17	Contig	SC	SAMEA1566073	GCA_900058325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/325/GCA_900058325.1_8525_5_16	-	FX535_2
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.11648	35.5	-	MAWY01	66	2178	2076	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481623	GCA_001694525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/525/GCA_001694525.1_ASM169452v1	27411639	DK-PW-161
Acinetobacter baumannii MRSN 57	1434212	PRJNA230697	230697	Proteobacteria	Gammaproteobacteria	3.95346	39.1	-	JABT01	104	3834	3693	3/11/14	3/16/17	Contig	Walter Reed Army Institute of Research	SAMN02437318	GCA_000586635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/635/GCA_000586635.1_MRSN57	24757213	MRSN 57
Pseudomonas aeruginosa JD316	1403035	PRJNA198782	198782	Proteobacteria	Gammaproteobacteria	6.19493	66.6	-	AWYM01	1882	6290	5331	12/11/13	3/15/17	Contig	University of Ottawa	SAMN02360640	GCA_000506125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/125/GCA_000506125.1_JD316.contigs	24324153	JD316
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.24852	51.6	-	FEPL01	83	2636	2256	2/9/16	3/21/17	Scaffold	SC	SAMEA2673808	GCA_900027405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/405/GCA_900027405.1_14355_4_13	-	2842STDY5880970
Helicobacter pylori SA216A	1345597	PRJEB4108	216064	Proteobacteria	delta/epsilon subdivisions	1.66639	39	-	CBMY01	71	1634	1447	9/21/13	3/27/17	Contig	MHH	SAMEA3158462	GCA_900005055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/005/055/GCA_900005055.1_SA216A	23898187	SA216A
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07898	39.7	-	CKPT01	62	2295	2092	3/21/15	3/11/17	Contig	SC	SAMEA1024653	GCA_001101485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/485/GCA_001101485.1_6680_5_15	-	SMRU927
Escherichia coli FRIK1999	1005477	PRJNA65767	65767	Proteobacteria	Gammaproteobacteria	5.42484	50.2	-	AMTV01	419	5918	5436	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00794579	GCA_000303775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/775/GCA_000303775.2_ASM30377v2	-	FRIK1999
Mycobacterium tuberculosis XTB13-278	1427327	PRJNA229725	229725	Terrabacteria group	Actinobacteria	4.40202	65.6	-	JLGY01	8	4266	4116	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419683	GCA_000656355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/355/GCA_000656355.1_Myco_tube_XTB13-278_V1	-	XTB13-278
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.96842	37.9	-	CWLN01	32	3051	2942	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466591	GCA_001496335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/335/GCA_001496335.1_2012_318878_13	-	-
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.6569	30.4	-	CZJH01	60	1769	1636	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556559	GCA_001408015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/408/015/GCA_001408015.1_57_S55	-	Campylobacter jejuni
Salmonella enterica subsp. enterica serovar Montevideo str. 413180	858315	PRJNA49991	49991	Proteobacteria	Gammaproteobacteria	4.65288	52.2	-	AETD01	38	4711	4470	2/8/11	5/19/17	Contig	FDA	SAMN00710602	GCA_000188635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/635/GCA_000188635.2_ASM18863v2	21345093	413180
Staphylococcus aureus M0002	1388552	PRJNA216725	216725	Terrabacteria group	Firmicutes	2.93591	32.9	-	JAZD01	7	3126	2962	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325676	GCA_000531375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/375/GCA_000531375.1_Stap_aure_M0002_V1	-	M0002
Staphylococcus aureus M0015	1388553	PRJNA216726	216726	Terrabacteria group	Firmicutes	2.95312	32.9	-	JAZC01	25	3147	2967	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325677	GCA_000531465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/465/GCA_000531465.1_Stap_aure_M0015_V1	-	M0015
Salmonella enterica subsp. enterica serovar Montevideo str. 446600	858316	PRJNA49993	49993	Proteobacteria	Gammaproteobacteria	4.64876	52.2	-	AETE01	47	4706	4458	2/8/11	5/19/17	Contig	FDA	SAMN00710603	GCA_000188655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/655/GCA_000188655.2_ASM18865v2	21345093	446600
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.76976	31.3	-	CZJB01	80	1863	1762	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556526	GCA_001408035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/408/035/GCA_001408035.1_22_S21	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.02464	37.9	-	CWLS01	174	3116	2969	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466561	GCA_001496415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/415/GCA_001496415.1_2011_176879_16d	-	-
Mycobacterium tuberculosis XTB13-290	1427329	PRJNA229727	229727	Terrabacteria group	Actinobacteria	4.4237	65.6	-	JLGX01	15	4312	4109	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419685	GCA_000656375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/375/GCA_000656375.1_Myco_tube_XTB13-290_V1	-	XTB13-290
Escherichia coli FRIK1997	1005480	PRJNA65773	65773	Proteobacteria	Gammaproteobacteria	5.58834	50.3	-	AMTW01	496	6116	5602	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00794581	GCA_000303795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/795/GCA_000303795.2_ASM30379v2	-	FRIK1997
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08564	39.6	-	COEQ02	183	2253	2045	3/23/15	3/11/17	Contig	SC	SAMEA1463125	GCA_001101545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/545/GCA_001101545.2_7622_5_54	-	MD5045
Helicobacter pylori	210	PRJEB13894	323442	Proteobacteria	delta/epsilon subdivisions	1.63869	38.9	-	FLKK01	80	1618	1481	5/26/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3982710	GCA_900086665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/665/GCA_900086665.1_BAC555-2	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16351	51.6	-	FEQC01	82	2511	2176	2/9/16	3/19/17	Scaffold	SC	SAMEA2674435	GCA_900027415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/415/GCA_900027415.1_14355_7_3	-	2842STDY5881632
Pseudomonas aeruginosa JD322	1403039	PRJNA198782	198782	Proteobacteria	Gammaproteobacteria	6.44956	66.5	-	AWYV01	1868	6583	5673	12/11/13	3/9/17	Contig	University of Ottawa	SAMN02360644	GCA_000506185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/185/GCA_000506185.1_JD322.contigs	24324153	JD322
Acinetobacter baumannii MRSN 58	1409926	PRJNA230699	230699	Proteobacteria	Gammaproteobacteria	3.9493	39.1	-	JABU01	104	3843	3700	3/11/14	3/16/17	Contig	Walter Reed Army Institute of Research	SAMN02437332	GCA_000586655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/655/GCA_000586655.1_MRSN58	24757213	MRSN 58
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.18392	35.3	-	MAWD01	39	2238	2134	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481602	GCA_001694555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/555/GCA_001694555.1_ASM169455v1	27411639	ATL-58
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.24455	41.1	-	FIHI01	54	2231	2108	2/10/16	3/19/17	Contig	SC	SAMEA1316543	GCA_900058475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/475/GCA_900058475.1_7114_5_57	-	LSS57
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.74982	50.7	-	CXAE01	415	5222	4590	7/16/15	2/24/17	Scaffold	SC	SAMEA2445762	GCA_001257315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/315/GCA_001257315.1_12971_8_70	-	H141120337
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.01074	68.3	-	CSKA01	77	7213	6747	3/23/15	3/26/17	Scaffold	SC	SAMEA1483595	GCA_001209525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/525/GCA_001209525.1_7910_5_31	-	17
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.94674	47.5	-	CWSC01	51	3750	3590	7/16/15	3/26/17	Scaffold	SC	SAMEA889338	GCA_001254055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/055/GCA_001254055.1_5174_7_3	-	A4
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.11706	28.4	-	FAAL01	322	3769	3659	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664098	GCA_900012035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/035/GCA_900012035.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.07873	45.3	-	MITA01	114	4834	4661	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368284	GCA_001727885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/885/GCA_001727885.1_ASM172788v1	-	CDC_K4639W
Klebsiella pneumoniae	573	PRJNA313004	313004	Proteobacteria	Gammaproteobacteria	5.54691	57.4	-	LUVT01	67	5653	5389	4/7/16	2/21/17	Scaffold	Chinese Center for Disease Control and Prevention	SAMN04534541	GCA_001613655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/655/GCA_001613655.1_ASM161365v1	-	TR200
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.63632	38.2	-	NGLD01	6	2684	2483	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634000	GCA_002140735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/735/GCA_002140735.1_ASM214073v1	-	5A12_DIV0114
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.65701	67.4	-	CHFO01	951	3721	2890	4/21/15	3/27/17	Scaffold	SC	SAMEA751454	GCA_001333115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/115/GCA_001333115.1_5476_8_5	-	B280
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66064	31.4	-	FBDD01	26	1720	1632	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683141	GCA_001496015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/015/GCA_001496015.1_EC4530	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16462	64.1	-	CSTG01	33	5274	5075	3/24/15	3/18/17	Scaffold	SC	SAMEA1464931	GCA_001213365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/365/GCA_001213365.1_7396_7_47	-	PAP095
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.32203	64.2	-	CSUA01	38	5365	5214	3/24/15	3/18/17	Scaffold	SC	SAMEA1464944	GCA_001213385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/385/GCA_001213385.1_7396_6_60	-	PAP012
Enterobacter cloacae	550	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.34024	55.9	-	DGGD01	74	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06453889	GCA_002392015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/392/015/GCA_002392015.1_ASM239201v1	28894102	-
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66025	31.4	-	FBJK01	22	1722	1629	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683309	GCA_001496035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/035/GCA_001496035.1_EC3344	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.78449	67.8	-	CHKV01	662	3788	3202	4/21/15	3/27/17	Scaffold	SC	SAMEA751455	GCA_001333135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/135/GCA_001333135.1_5601_1_11	-	B059
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.90437	37.9	-	NGKZ01	4	2989	2734	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634008	GCA_002140805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/805/GCA_002140805.1_ASM214080v1	-	7C8_DIV0219
Klebsiella pneumoniae	573	PRJNA313004	313004	Proteobacteria	Gammaproteobacteria	5.57439	57.3	-	LUVV01	72	5675	5440	4/7/16	2/21/17	Scaffold	Chinese Center for Disease Control and Prevention	SAMN04534543	GCA_001613665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/665/GCA_001613665.1_ASM161366v1	-	TR262
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.09229	45.3	-	MISZ01	122	4864	4683	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN03358830	GCA_001727895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/895/GCA_001727895.1_ASM172789v1	-	CDC_K4639G
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.26265	29.3	-	FAAT01	1059	3929	3749	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664103	GCA_900012045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/045/GCA_900012045.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.96604	47.5	-	CWSO01	29	3792	3611	7/16/15	3/26/17	Scaffold	SC	SAMEA889198	GCA_001254095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/095/GCA_001254095.1_5174_8_7	-	A325
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.02633	68.3	-	CSKH01	84	7235	6758	3/22/15	3/26/17	Scaffold	SC	SAMEA949354	GCA_001210025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/025/GCA_001210025.1_7915_5_24	-	D7 3230-3018
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	3.85373	51.1	-	CXNS01	139	4148	3715	7/16/15	2/24/17	Scaffold	SC	SAMEA2058003	GCA_001257335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/335/GCA_001257335.1_9870_7_2	-	144366
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.09817	41.1	-	FIKE01	51	2126	2000	2/10/16	3/19/17	Contig	SC	SAMEA1316676	GCA_900058495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/495/GCA_900058495.1_7054_7_87	-	SS1035
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.03098	35.2	-	MAWG01	45	2084	1964	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481605	GCA_001694575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/575/GCA_001694575.1_ASM169457v1	27411639	ATL-94
Acinetobacter baumannii 145660	1310789	PRJNA194865	194865	Proteobacteria	Gammaproteobacteria	4.06867	39.1	-	JFXU01	80	4024	3792	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415061	GCA_000587875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/875/GCA_000587875.1_ASM58787v1	-	145660
Pseudomonas aeruginosa JD333	1403048	PRJNA198782	198782	Proteobacteria	Gammaproteobacteria	6.33112	66.5	-	AWZE01	1996	6489	5501	12/11/13	3/15/17	Contig	University of Ottawa	SAMN02360653	GCA_000506345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/345/GCA_000506345.1_JD333.contigs	24324153	JD333
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12115	51.7	-	FERY01	84	2475	2154	2/9/16	3/19/17	Scaffold	SC	SAMEA2674023	GCA_900027425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/425/GCA_900027425.1_14355_4_81	-	2842STDY5881038
Helicobacter pylori	210	PRJEB13894	323442	Proteobacteria	delta/epsilon subdivisions	1.63655	38.9	-	FLKJ01	87	1622	1482	5/26/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3982711	GCA_900086675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/675/GCA_900086675.1_BAC555-8	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00126	39.7	-	CNZR02	140	2157	1978	3/23/15	3/5/17	Contig	SC	SAMEA1462972	GCA_001101565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/565/GCA_001101565.2_7553_5_80	-	PT8053
Escherichia coli NE1487	1005485	PRJNA65835	65835	Proteobacteria	Gammaproteobacteria	5.39473	50.3	-	AMTX01	429	5865	5399	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00794582	GCA_000303815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/815/GCA_000303815.2_ASM30381v2	-	NE1487
Mycobacterium tuberculosis XTB13-299	1427330	PRJNA229728	229728	Terrabacteria group	Actinobacteria	4.4262	65.6	-	JLGW01	5	4308	4123	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02419686	GCA_000656395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/395/GCA_000656395.1_Myco_tube_XTB13-299_V1	-	XTB13-299
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.03657	37.9	-	CWLY01	75	3136	3012	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466566	GCA_001496455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/455/GCA_001496455.1_2013_148278_8	-	-
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.77208	30.3	-	CZHL01	129	1922	1699	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556540	GCA_001408055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/408/055/GCA_001408055.1_36_S35	-	Campylobacter jejuni
Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1	858317	PRJNA49995	49995	Proteobacteria	Gammaproteobacteria	4.64351	52.2	-	AETF01	98	4725	4469	2/10/11	5/19/17	Contig	FDA	SAMN00710604	GCA_000188895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/895/GCA_000188895.2_ASM18889v2	21345093	609458-1
Staphylococcus aureus M0023	1388554	PRJNA216727	216727	Terrabacteria group	Firmicutes	2.87489	32.9	-	JAZB01	13	3019	2849	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325678	GCA_000531495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/495/GCA_000531495.1_Stap_aure_M0023_V1	-	M0023
Staphylococcus aureus M0032	1388555	PRJNA216728	216728	Terrabacteria group	Firmicutes	2.92123	32.9	-	JAZA01	22	3075	2906	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325679	GCA_000531555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/555/GCA_000531555.1_Stap_aure_M0032_V1	-	M0032
Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1	858318	PRJNA49997	49997	Proteobacteria	Gammaproteobacteria	4.6434	52.2	-	AETG01	83	4717	4461	2/10/11	5/19/17	Contig	FDA	SAMN00710605	GCA_000188915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/915/GCA_000188915.2_ASM18891v2	21345093	556150-1
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.59207	30.6	-	CZJJ01	71	1684	1455	10/11/15	4/10/17	Contig	LSHTM	SAMEA3556558	GCA_001408075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/408/075/GCA_001408075.1_56_S54	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.11602	37.8	-	CWMC01	75	3213	3068	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466574	GCA_001496595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/595/GCA_001496595.1_2012_298383_16	-	-
Mycobacterium tuberculosis UT0117	1438878	PRJNA233322	233322	Terrabacteria group	Actinobacteria	4.39887	65.6	-	JLMX01	92	4342	4102	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02567662	GCA_000656415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/415/GCA_000656415.1_Myco_tube_UT0117_V1	-	UT0117
Escherichia coli NE037	1005484	PRJNA65833	65833	Proteobacteria	Gammaproteobacteria	5.47165	50.2	-	AMTY01	539	5985	5479	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00794583	GCA_000303835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/835/GCA_000303835.2_ASM30383v2	-	NE037
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.10957	39.5	-	CMOK01	48	2336	2094	3/23/15	3/11/17	Contig	SC	SAMEA2061484	GCA_001101605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/605/GCA_001101605.1_9803_7_28	-	23F
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63257	38.9	-	FLON01	58	1628	1442	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3992708	GCA_900087465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/465/GCA_900087465.1_TC-1_5	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16367	51.6	-	FETE01	72	2513	2177	2/9/16	3/19/17	Scaffold	SC	SAMEA2673946	GCA_900027435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/435/GCA_900027435.1_14355_5_55	-	2842STDY5881108
Pseudomonas aeruginosa JD335	1403050	PRJNA198782	198782	Proteobacteria	Gammaproteobacteria	6.37385	66.4	-	AWZG01	1820	6506	5605	12/11/13	3/9/17	Contig	University of Ottawa	SAMN02360655	GCA_000506365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/365/GCA_000506365.1_JD335.contigs	24324153	JD335
Acinetobacter baumannii 1494580	1310799	PRJNA194875	194875	Proteobacteria	Gammaproteobacteria	4.21726	39.2	-	JFXT01	136	4264	3903	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415062	GCA_000587895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/895/GCA_000587895.1_ASM58789v1	-	1494580
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.16024	35.4	-	MAWK01	40	2231	2118	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481609	GCA_001694585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/585/GCA_001694585.1_ASM169458v1	27411639	BE-PW-092
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.03771	41.2	-	FIPG01	23	2044	1925	2/10/16	3/19/17	Contig	SC	SAMEA1566182	GCA_900058505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/505/GCA_900058505.1_8337_6_81	-	EN660
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.77984	50.7	-	CXMN01	421	5436	4609	7/16/15	2/24/17	Scaffold	SC	SAMEA2057214	GCA_001257355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/355/GCA_001257355.1_9870_6_2	-	143094
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.11145	68.2	-	CSKE01	69	7359	6852	3/23/15	3/26/17	Scaffold	SC	SAMEA949468	GCA_001210645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/645/GCA_001210645.1_7910_7_19	-	4086-21
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.01826	47.5	-	CWRV01	41	3813	3673	7/16/15	4/10/17	Scaffold	SC	SAMEA889185	GCA_001254335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/335/GCA_001254335.1_5174_6_4	-	4784
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.11484	28.5	-	FAAS01	339	3740	3641	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664104	GCA_900012055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/055/GCA_900012055.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.28707	45.1	-	MITC01	129	5069	4872	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368287	GCA_001727915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/915/GCA_001727915.1_ASM172791v1	-	CDC_K4763
Klebsiella pneumoniae	573	PRJNA313004	313004	Proteobacteria	Gammaproteobacteria	5.53484	57.4	-	LUGR01	73	5620	5387	4/7/16	2/21/17	Scaffold	Chinese Center for Disease Control and Prevention	SAMN04532756	GCA_001613715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/715/GCA_001613715.1_ASM161371v1	-	TR187
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	3.35242	38.2	-	NGKW01	65	3339	2993	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634009	GCA_002140865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/865/GCA_002140865.1_ASM214086v1	-	7H8_DIV0219
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.64358	67.4	-	CFNR01	1117	3720	2869	3/15/15	3/27/17	Scaffold	SC	SAMEA751458	GCA_001333155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/155/GCA_001333155.1_5476_8_1	-	B277
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66067	31.4	-	FBCH01	25	1722	1626	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683120	GCA_001496055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/055/GCA_001496055.1_EC4462	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15832	64.1	-	CSUZ01	15	5263	5089	3/24/15	3/18/17	Scaffold	SC	SAMEA1464906	GCA_001213405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/405/GCA_001213405.1_7396_6_87	-	PAP039
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15798	64.1	-	CSVI01	34	5265	5071	3/24/15	3/18/17	Scaffold	SC	SAMEA1464918	GCA_001213425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/425/GCA_001213425.1_7396_7_10	-	PAP058
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.60979	31.5	-	FAZM01	23	1614	1548	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683048	GCA_001496095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/095/GCA_001496095.1_H073180383	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.74746	67.7	-	CFYO01	820	3787	3088	3/15/15	3/27/17	Scaffold	SC	SAMEA751459	GCA_001333175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/175/GCA_001333175.1_5476_7_12	-	B049
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.83889	38	-	NGKV01	7	2882	2685	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634025	GCA_002140895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/895/GCA_002140895.1_ASM214089v1	-	8E4_DIV03290
Klebsiella pneumoniae	573	PRJNA318574	318574	Proteobacteria	Gammaproteobacteria	5.6049	57	-	LWLM01	72	5633	5354	4/25/16	2/21/17	Scaffold	Sichuan University	SAMN04866789	GCA_001630805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/630/805/GCA_001630805.1_ASM163080v1	-	SCLZ15-011
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.1032	45.3	-	MITB01	108	4861	4688	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368286	GCA_001727925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/925/GCA_001727925.1_ASM172792v1	-	CDC_K4762
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.51066	28.7	-	FAAU01	1606	4062	3899	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664106	GCA_900012075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/075/GCA_900012075.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.02896	47.5	-	CWSQ01	46	3805	3665	7/16/15	3/26/17	Scaffold	SC	SAMEA889224	GCA_001254355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/355/GCA_001254355.1_5174_8_9	-	MG116226
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.09839	68.2	-	CSQP01	78	7320	6790	3/23/15	3/26/17	Scaffold	SC	SAMEA807030	GCA_001210705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/705/GCA_001210705.1_7907_5_16	-	C16
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.68671	50.7	-	CWXP01	389	5211	4507	7/16/15	2/24/17	Scaffold	SC	SAMEA2445693	GCA_001257375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/375/GCA_001257375.1_12971_8_14	-	H082400248
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.0839	41.2	-	FIRX01	22	2110	1998	2/10/16	3/19/17	Contig	SC	SAMEA1566128	GCA_900058525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/525/GCA_900058525.1_8525_5_89	-	VS3886
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.25424	35.3	-	MAWT01	46	2290	2180	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481618	GCA_001694625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/625/GCA_001694625.1_ASM169462v1	27411639	CZ-PW-140
Acinetobacter baumannii 1294222	1310765	PRJNA194841	194841	Proteobacteria	Gammaproteobacteria	4.15313	39.1	-	JFXF01	131	4178	3857	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415050	GCA_000587915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/915/GCA_000587915.1_ASM58791v1	-	1294222
Pseudomonas aeruginosa VRFPA07	1431713	PRJNA230365	230365	Proteobacteria	Gammaproteobacteria	7.17722	65.9	-	AZBO01	140	7115	6586	12/11/13	3/16/17	Contig	"SANKARA NETHRALAYA, VISION RESEARCH FOUNDATION"	SAMN02472099	GCA_000506805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/805/GCA_000506805.1_P_aeruginosa_VRFPA07	24604649	VRFPA07
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12868	51.7	-	FEUG01	71	2486	2156	2/9/16	3/19/17	Scaffold	SC	SAMEA2673853	GCA_900027445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/445/GCA_900027445.1_14355_6_32	-	2842STDY5881181
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.64363	38.9	-	FLOM01	78	1656	1457	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3992707	GCA_900087475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/475/GCA_900087475.1_TC-1_1	-	-
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08376	39.5	-	CLDS01	94	2251	2055	3/21/15	3/11/17	Contig	SC	SAMEA1025901	GCA_001101645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/645/GCA_001101645.1_6899_5_4	-	SMRU2044
Escherichia coli FRIK2001	1005479	PRJNA65771	65771	Proteobacteria	Gammaproteobacteria	5.40417	50.3	-	AMTZ01	400	5885	5422	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00794584	GCA_000303855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/855/GCA_000303855.2_ASM30385v2	-	FRIK2001
Mycobacterium tuberculosis UT0006	1438881	PRJNA233330	233330	Terrabacteria group	Actinobacteria	4.40093	65.6	-	JLMW01	72	4324	4111	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02567670	GCA_000656435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/435/GCA_000656435.1_Myco_tube_UT0006_V1	-	UT0006
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.0878	37.8	-	CWMF01	79	3205	3074	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466583	GCA_001496755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/755/GCA_001496755.1_2012_313587_3	-	-
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.63617	30.4	-	CZIV01	47	1713	1588	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556536	GCA_001408095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/408/095/GCA_001408095.1_32_S31	-	Campylobacter jejuni
Salmonella enterica subsp. enterica serovar Montevideo str. 609460	859198	PRJNA50021	50021	Proteobacteria	Gammaproteobacteria	4.64567	52.2	-	AETH01	95	4727	4441	2/10/11	5/19/17	Contig	FDA	SAMN00710607	GCA_000188935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/935/GCA_000188935.2_ASM18893v2	21345093	609460
Staphylococcus aureus M0047	1388556	PRJNA216729	216729	Terrabacteria group	Firmicutes	2.9599	32.8	-	JAYZ01	17	3161	3008	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325680	GCA_000531615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/615/GCA_000531615.1_Stap_aure_M0047_V1	-	M0047
Staphylococcus aureus M0059	1388557	PRJNA216730	216730	Terrabacteria group	Firmicutes	2.96617	33	-	JAYY01	24	3166	2969	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02325681	GCA_000531665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/665/GCA_000531665.1_Stap_aure_M0059_V1	-	M0059
Salmonella enterica subsp. enterica serovar Montevideo str. 556152	871586	PRJNA51379	51379	Proteobacteria	Gammaproteobacteria	4.63589	52.2	-	AETJ01	173	4758	4348	2/10/11	5/19/17	Contig	FDA	SAMN00710609	GCA_000188975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/975/GCA_000188975.2_ASM18897v2	21345093	556152
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.75419	30.4	-	CZJG01	79	1901	1724	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556560	GCA_001408115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/408/115/GCA_001408115.1_58_S56	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.86596	37.5	-	CWMX01	308	2994	2788	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466608	GCA_001496955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/955/GCA_001496955.1_2014_60580_2C	-	-
Mycobacterium tuberculosis UT0014	1438839	PRJNA233332	233332	Terrabacteria group	Actinobacteria	4.40121	65.5	-	JLMV01	109	4350	4109	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02567672	GCA_000656455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/455/GCA_000656455.1_Myco_tube_UT0014_V1	-	UT0014
Escherichia coli PA4	1005489	PRJNA65843	65843	Proteobacteria	Gammaproteobacteria	5.45503	50.2	-	AMUA01	411	5910	5467	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00794585	GCA_000303875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/875/GCA_000303875.2_ASM30387v2	-	PA4
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08157	39.6	-	COAQ02	169	2267	2068	3/22/15	3/5/17	Contig	SC	SAMEA1463145	GCA_001101685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/685/GCA_001101685.2_7622_2_17	-	BR1050
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63083	38.9	-	FLOL01	69	1619	1459	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3992709	GCA_900087485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/485/GCA_900087485.1_TC-1_9	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.13804	51.7	-	FEWO01	69	2514	2165	2/9/16	3/21/17	Scaffold	SC	SAMEA2674295	GCA_900027455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/455/GCA_900027455.1_14555_6_71	-	2842STDY5881508
Pseudomonas aeruginosa VRFPA08	1434267	PRJNA230869	230869	Proteobacteria	Gammaproteobacteria	7.03533	66.1	-	AZHU01	197	6984	6473	12/11/13	3/9/17	Contig	"SANKARA NETHRALAYA, VISION RESEARCH FOUNDATION"	SAMN02472103	GCA_000506885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/885/GCA_000506885.1_P_aeruginosa_VRFPA08	24604649	VRFPA08
Acinetobacter baumannii 755829	1310757	PRJNA194833	194833	Proteobacteria	Gammaproteobacteria	4.17824	39.1	-	JFXY01	139	4175	3843	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415075	GCA_000587935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/935/GCA_000587935.1_ASM58793v1	-	755829
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.03461	35.2	-	MAWV01	29	2072	1978	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481620	GCA_001694645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/645/GCA_001694645.1_ASM169464v1	27411639	DE-PW-196
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.08163	41.1	-	FIFH01	88	2134	1967	2/10/16	3/19/17	Contig	SC	SAMEA1316611	GCA_900058685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/685/GCA_900058685.1_5749_1_9	-	LOLA-SS009
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.75626	50.7	-	CWUF01	411	5529	4536	7/16/15	2/24/17	Scaffold	SC	SAMEA3345017	GCA_001257395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/395/GCA_001257395.1_H14138024801	-	24801ss_1
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08232	68.2	-	CSNW01	59	7302	6796	3/22/15	3/26/17	Scaffold	SC	SAMEA807027	GCA_001210965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/965/GCA_001210965.1_7909_4_9	-	C42
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.9864	47.5	-	CWSB01	52	3811	3656	7/16/15	4/10/17	Scaffold	SC	SAMEA889331	GCA_001254435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/435/GCA_001254435.1_5174_7_2	-	GP160
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.22468	28.9	-	FAAY01	1563	3833	3611	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664108	GCA_900012095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/095/GCA_900012095.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.03343	45.4	-	MITE01	111	4827	4662	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN03358831	GCA_001727965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/965/GCA_001727965.1_ASM172796v1	-	CDC_K4764L
Klebsiella pneumoniae	573	PRJNA320950	320950	Proteobacteria	Gammaproteobacteria	5.62627	57.1	-	LXQO01	91	5793	5537	7/6/16	2/21/17	Scaffold	University of Siena	SAMN04961293	GCA_001679915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/915/GCA_001679915.1_ASM167991v1	-	KP-6884
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.90999	38.3	-	NGKT01	10	2883	2683	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634086	GCA_002140955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/955/GCA_002140955.1_ASM214095v1	-	9B11__DIV0348
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.68986	67.6	-	CFWI01	1127	3761	2965	3/15/15	3/27/17	Scaffold	SC	SAMEA751460	GCA_001333195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/195/GCA_001333195.1_5476_8_3	-	B278
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.6634	31.4	-	FBFJ01	17	1718	1636	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683201	GCA_001496115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/115/GCA_001496115.1_EC5338	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.85159	64.1	-	CSUX01	14	4815	4669	3/24/15	3/18/17	Scaffold	SC	SAMEA1464949	GCA_001213445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/445/GCA_001213445.1_7396_6_86	-	PAP038
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.85576	64.1	-	CSVT01	36	4886	4726	3/24/15	3/18/17	Scaffold	SC	SAMEA1464941	GCA_001213465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/465/GCA_001213465.1_7396_7_2	-	PAP050
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65542	31.4	-	FBJB01	61	1722	1615	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683301	GCA_001496135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/135/GCA_001496135.1_EC3160	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.79996	67.8	-	CIKQ01	550	3753	3213	4/21/15	3/26/17	Scaffold	SC	SAMEA751461	GCA_001333215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/215/GCA_001333215.1_5601_1_10	-	B058
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.62242	38.5	-	NGMN01	4	2608	2406	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04633993	GCA_002141005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/005/GCA_002141005.1_ASM214100v1	-	9G1_4859
Klebsiella pneumoniae	573	PRJNA322421	322421	Proteobacteria	Gammaproteobacteria	5.52753	57.2	-	LYNH01	40	5555	5316	8/9/16	2/21/17	Scaffold	Zhejiang university	SAMN05162521	GCA_001701585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/585/GCA_001701585.1_ASM170158v1	-	SKLX2467
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.27653	45.1	-	MITD01	114	5050	4862	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368288	GCA_001727975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/975/GCA_001727975.1_ASM172797v1	-	CDC_K4764D
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.12469	28.5	-	FAAW01	340	3766	3650	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664109	GCA_900012105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/105/GCA_900012105.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.99034	47.5	-	CWOG01	89	3779	3511	7/16/15	3/26/17	Scaffold	SC	SAMEA889381	GCA_001254535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/535/GCA_001254535.1_4056_5_5	-	A59
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08924	68.2	-	CSKW01	71	7322	6826	3/22/15	3/26/17	Scaffold	SC	SAMEA1483581	GCA_001211245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/245/GCA_001211245.1_7910_5_19	-	561
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.44039	51	-	CXCP01	559	4671	4075	7/16/15	2/24/17	Scaffold	SC	SAMEA954606	GCA_001257415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/415/GCA_001257415.1_5236_5_1	-	ShIB3599_440877
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.11848	41.1	-	FIIJ01	48	2163	2021	2/10/16	3/19/17	Contig	SC	SAMEA1316671	GCA_900058705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/705/GCA_900058705.1_7114_5_86	-	LSS86
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.1915	35.4	-	MAWW01	52	2262	2142	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481621	GCA_001694675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/675/GCA_001694675.1_ASM169467v1	27411639	DK-NI-19
Acinetobacter baumannii 214216	1310783	PRJNA194859	194859	Proteobacteria	Gammaproteobacteria	4.04905	39.1	-	JFXR01	58	3975	3733	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415063	GCA_000587955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/955/GCA_000587955.1_ASM58795v1	-	214216
Pseudomonas aeruginosa MH27	1306165	PRJEB1668	230292	Proteobacteria	Gammaproteobacteria	7.15569	65.9	-	CBTR01	31	6853	6614	11/25/13	3/15/17	Contig	CeBiTec	SAMEA3138835	GCA_000513235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/235/GCA_000513235.1_MH27	-	MH27
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.106	51.7	-	FEWQ01	117	2429	2080	2/9/16	3/21/17	Scaffold	SC	SAMEA2674315	GCA_900027465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/465/GCA_900027465.1_14555_6_81	-	2842STDY5881518
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63064	38.9	-	FLOP01	71	1624	1476	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3992711	GCA_900087495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/495/GCA_900087495.1_TC-2_1	-	-
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.06859	39.5	-	CPLG01	113	2228	2024	3/22/15	3/11/17	Contig	SC	SAMEA1020848	GCA_001101785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/785/GCA_001101785.1_5901_6_1	-	6575-07
Escherichia coli PA23	1005498	PRJNA65861	65861	Proteobacteria	Gammaproteobacteria	5.41283	50.3	-	AMUB01	427	5860	5410	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00794586	GCA_000303895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/895/GCA_000303895.2_ASM30389v2	-	PA23
Mycobacterium tuberculosis UT0028	1438841	PRJNA233333	233333	Terrabacteria group	Actinobacteria	4.42279	65.5	-	JLMU01	103	4341	4116	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02567673	GCA_000656475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/475/GCA_000656475.1_Myco_tube_UT0028_V1	-	UT0028
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.9735	37.8	-	CWNE01	217	3045	2926	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466612	GCA_001497315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/315/GCA_001497315.1_2012_94314	-	-
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.67606	30.4	-	CZIG01	39	1761	1608	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556534	GCA_001408135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/408/135/GCA_001408135.1_30_S29	-	Campylobacter jejuni
Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077	871587	PRJNA51381	51381	Proteobacteria	Gammaproteobacteria	4.64773	52.2	-	AETK01	52	4699	4444	2/10/11	5/19/17	Contig	FDA	SAMN00710610	GCA_000188995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/995/GCA_000188995.2_ASM18899v2	21345093	MB101509-0077
Staphylococcus aureus M0078	1388558	PRJNA216731	216731	Terrabacteria group	Firmicutes	2.88429	32.9	-	JAYX01	19	3048	2882	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325682	GCA_000531735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/735/GCA_000531735.1_Stap_aure_M0078_V1	-	M0078
Staphylococcus aureus M0088	1388559	PRJNA216732	216732	Terrabacteria group	Firmicutes	2.94518	32.9	-	JAYW01	9	3138	2974	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325683	GCA_000531775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/775/GCA_000531775.1_Stap_aure_M0088_V1	-	M0088
Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047	871588	PRJNA51383	51383	Proteobacteria	Gammaproteobacteria	4.63418	52.2	-	AETL01	185	4757	4366	2/10/11	5/19/17	Contig	FDA	SAMN00710611	GCA_000189015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/015/GCA_000189015.2_ASM18901v2	21345093	MB102109-0047
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.64835	30.5	-	CZHX01	34	1758	1633	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556527	GCA_001408155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/408/155/GCA_001408155.1_23_S22	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.92933	37.9	-	CWMU01	166	2992	2862	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466607	GCA_001497565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/565/GCA_001497565.1_2014_60580_2B	-	-
Mycobacterium tuberculosis UT0032	1438887	PRJNA233334	233334	Terrabacteria group	Actinobacteria	4.3714	65.6	-	JLMT01	73	4287	4096	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02567674	GCA_000656495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/495/GCA_000656495.1_Myco_tube_UT0032_V1	-	UT0032
Escherichia coli PA49	1005514	PRJNA65897	65897	Proteobacteria	Gammaproteobacteria	5.49218	50.3	-	AMUC01	472	5968	5512	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00794587	GCA_000303915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/915/GCA_000303915.2_ASM30391v2	-	PA49
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07926	39.6	-	CNOY02	144	2276	2067	3/23/15	3/11/17	Contig	SC	SAMEA1032570	GCA_001101865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/865/GCA_001101865.2_6930_8_6	-	R34-3012
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63074	38.9	-	FLOJ01	56	1623	1481	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3992712	GCA_900087505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/505/GCA_900087505.1_TC-2_5	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16316	51.5	-	FEXL01	95	2514	2156	2/9/16	3/21/17	Scaffold	SC	SAMEA2674405	GCA_900027475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/475/GCA_900027475.1_14324_5_68	-	2842STDY5881601
Pseudomonas aeruginosa RB-48	1441928	PRJNA232736	232736	Proteobacteria	Gammaproteobacteria	6.17506	66.5	-	AZYL01	183	5897	5717	2/10/14	3/15/17	Contig	UNIVERSITY OF MALAYA	SAMN02487176	GCA_000568115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/115/GCA_000568115.1_De_Novo_Assembly	-	RB-48
Acinetobacter baumannii 1266220	1310758	PRJNA194834	194834	Proteobacteria	Gammaproteobacteria	4.14479	39.2	-	JFXA01	110	4136	3858	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415047	GCA_000587975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/975/GCA_000587975.1_ASM58797v1	-	1266220
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.01879	35.2	-	MBLE01	56	2064	1958	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481635	GCA_001694695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/695/GCA_001694695.1_ASM169469v1	27411639	IT-PW-052
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.17299	41.1	-	FIIS01	52	2184	2014	2/10/16	3/19/17	Contig	SC	SAMEA1316526	GCA_900058725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/725/GCA_900058725.1_7114_5_96	-	LSS96
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.50992	50.8	-	CXBK01	391	4795	4316	7/16/15	2/24/17	Scaffold	SC	SAMEA954576	GCA_001257435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/435/GCA_001257435.1_5236_1_8	-	ShIB739_440734
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.09695	68.2	-	CSLG01	62	7327	6837	3/22/15	3/26/17	Scaffold	SC	SAMEA949382	GCA_001211305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/305/GCA_001211305.1_7910_7_1	-	P163/04
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.03415	47.5	-	CWRM01	48	3827	3668	7/16/15	3/26/17	Scaffold	SC	SAMEA889188	GCA_001254635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/635/GCA_001254635.1_5174_5_3	-	4623
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.11476	28.6	-	FAAX01	556	3763	3623	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664110	GCA_900012115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/115/GCA_900012115.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.19468	45.2	-	MITG01	115	4989	4822	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368290	GCA_001727995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/727/995/GCA_001727995.1_ASM172799v1	-	CDC_K4842
Klebsiella pneumoniae	573	PRJNA323981	323981	Proteobacteria	Gammaproteobacteria	5.70201	56.8	-	LYZC01	69	5843	5479	9/2/16	2/21/17	Scaffold	University of Sao Paulo	SAMN05193406	GCA_001718115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/115/GCA_001718115.1_ASM171811v1	-	1194
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.66502	38.4	-	NGKR01	8	2642	2429	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634026	GCA_002141035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/035/GCA_002141035.1_ASM214103v1	-	9H1_DIV04860
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.73732	67.6	-	CVJB01	756	3766	3059	4/2/15	3/27/17	Scaffold	SC	SAMEA751462	GCA_001333235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/235/GCA_001333235.1_6062_1_7	-	B299
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.84073	30.9	-	FBPK01	101	1927	1799	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683464	GCA_001496155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/155/GCA_001496155.1_H051160594	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18747	64.2	-	CSVG01	48	5191	5034	3/24/15	3/18/17	Scaffold	SC	SAMEA1464940	GCA_001213505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/505/GCA_001213505.1_7396_6_95	-	PAP047
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.84262	64.1	-	CSUD01	54	4870	4724	3/24/15	3/18/17	Scaffold	SC	SAMEA1464894	GCA_001213545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/545/GCA_001213545.1_7396_6_64	-	PAP016
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.76523	31.1	-	FBMK01	30	1853	1751	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683388	GCA_001496175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/175/GCA_001496175.1_UNQMCIIS16	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.79268	67.7	-	CVIZ01	477	3746	3196	4/2/15	3/27/17	Scaffold	SC	SAMEA751463	GCA_001333255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/255/GCA_001333255.1_6062_1_8	-	B300
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.83462	38.2	-	NGME01	9	2813	2583	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634046	GCA_002141075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/075/GCA_002141075.1_ASM214107v1	-	10G4_DIV0391
Klebsiella pneumoniae	573	PRJNA322396	322396	Proteobacteria	Gammaproteobacteria	5.50418	57.3	-	LYMZ01	82	5634	5308	9/2/16	2/21/17	Scaffold	University of Sao Paulo	SAMN05162257	GCA_001718175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/175/GCA_001718175.1_ASM171817v1	-	606B
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.15836	45.1	-	MITF01	121	4876	4735	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368289	GCA_001728005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/005/GCA_001728005.1_ASM172800v1	-	CDC_K4775
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.39426	29	-	FAAZ01	267	4111	3962	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664113	GCA_900012125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/125/GCA_900012125.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.14503	47.7	-	CWSF01	49	3992	3840	7/17/15	3/26/17	Scaffold	SC	SAMEA889335	GCA_001254655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/655/GCA_001254655.1_5174_7_6	-	A10
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.09599	68.2	-	CSPM01	70	7310	6779	3/23/15	3/26/17	Scaffold	SC	SAMEA807052	GCA_001211345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/345/GCA_001211345.1_7909_4_29	-	C62
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.96077	50.5	-	CXLU01	435	5639	4771	7/16/15	2/24/17	Scaffold	SC	SAMEA2004912	GCA_001257455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/455/GCA_001257455.1_8290_5_5	-	36234868
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.11279	41.1	-	FIJG01	55	2151	2009	2/10/16	3/19/17	Contig	SC	SAMEA1316622	GCA_900058735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/735/GCA_900058735.1_7054_7_21	-	SS1009
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.14656	35.4	-	MBLD01	51	2188	2082	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481636	GCA_001694705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/705/GCA_001694705.1_ASM169470v1	27411639	IT-PW-075
Acinetobacter baumannii 541915	1310786	PRJNA194862	194862	Proteobacteria	Gammaproteobacteria	3.80864	39.1	-	JFXQ01	91	3614	3436	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415069	GCA_000588035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/035/GCA_000588035.1_ASM58803v1	-	541915
Pseudomonas aeruginosa CF_PA39	1457194	PRJNA236781	236781	Proteobacteria	Gammaproteobacteria	6.18727	66.4	-	JDVE01	97	5840	5579	2/11/14	3/18/17	Contig	Vrije Universiteit Brussel	SAMN02602860	GCA_000568235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/235/GCA_000568235.2_CF_PA39_1.0	24659602	CF_PA39
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12431	51.7	-	FERX01	91	2489	2168	2/9/16	3/19/17	Scaffold	SC	SAMEA2674018	GCA_900027835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/835/GCA_900027835.1_14355_4_79	-	2842STDY5881036
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63028	38.9	-	FLOO01	56	1619	1474	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3992714	GCA_900087515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/515/GCA_900087515.1_TC-2_10	-	-
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.11082	39.8	-	CLOD01	79	2325	2108	3/21/15	3/4/17	Contig	SC	SAMEA1028870	GCA_001101925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/925/GCA_001101925.1_6949_1_17	-	SMRU2417
Escherichia coli PA45	1005511	PRJNA65891	65891	Proteobacteria	Gammaproteobacteria	5.39685	50.3	-	AMUD01	424	5837	5392	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00794588	GCA_000303935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/935/GCA_000303935.2_ASM30393v2	-	PA45
Mycobacterium tuberculosis UT0054	1438836	PRJNA233338	233338	Terrabacteria group	Actinobacteria	4.42226	65.6	-	JLMQ01	76	4347	4145	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02567678	GCA_000656515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/515/GCA_000656515.1_Myco_tube_UT0054_V1	-	UT0054
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.0002	37.9	-	CWNA01	142	3063	2921	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466619	GCA_001497635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/635/GCA_001497635.1_2013_72492_2	-	-
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.65478	30.5	-	CZID01	54	1753	1577	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556533	GCA_001408175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/408/175/GCA_001408175.1_29_S28	-	Campylobacter jejuni
Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055	871589	PRJNA51385	51385	Proteobacteria	Gammaproteobacteria	4.63694	52.2	-	AETM01	194	4791	4363	2/10/11	5/19/17	Contig	FDA	SAMN00710612	GCA_000189035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/035/GCA_000189035.2_ASM18903v2	21345093	MB110209-0055
Staphylococcus aureus M0105	1388560	PRJNA216733	216733	Terrabacteria group	Firmicutes	2.94974	33.1	-	JAYV01	10	3093	2932	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02325684	GCA_000531835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/835/GCA_000531835.1_Stap_aure_M0105_V1	-	M0105
Staphylococcus aureus M0113	1388561	PRJNA216734	216734	Terrabacteria group	Firmicutes	2.96919	33	-	JAYU01	22	3135	2987	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02325685	GCA_000531855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/855/GCA_000531855.1_Stap_aure_M0113_V1	-	M0113
Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052	871590	PRJNA51387	51387	Proteobacteria	Gammaproteobacteria	4.65099	52.2	-	AETN01	32	4717	4481	2/10/11	5/19/17	Contig	FDA	SAMN00710613	GCA_000189055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/055/GCA_000189055.2_ASM18905v2	21345093	MB111609-0052
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.68458	30.6	-	CZIX01	291	1821	1592	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556529	GCA_001408195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/408/195/GCA_001408195.1_25_S24	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.00186	37.9	-	CWMR01	331	3139	2941	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466603	GCA_001497715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/715/GCA_001497715.1_2014_60573_2	-	-
Mycobacterium tuberculosis UT0073	1438832	PRJNA233339	233339	Terrabacteria group	Actinobacteria	4.40139	65.6	-	JLMP01	73	4319	4129	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02567679	GCA_000656535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/535/GCA_000656535.1_Myco_tube_UT0073_V1	-	UT0073
Escherichia coli TT12B	1005555	PRJNA65979	65979	Proteobacteria	Gammaproteobacteria	5.29652	50.3	-	AMUE01	310	5654	5239	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00794595	GCA_000303955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/955/GCA_000303955.2_ASM30395v2	-	TT12B
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.16095	39.6	-	COFP02	222	2377	2143	3/23/15	3/5/17	Contig	SC	SAMEA1462988	GCA_001101945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/945/GCA_001101945.2_7622_5_82	-	ND6042
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63072	38.9	-	FLOI01	59	1626	1440	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3992710	GCA_900087535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/535/GCA_900087535.1_TC-1_10	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.17559	51.5	-	FERZ01	98	2536	2176	2/9/16	3/21/17	Scaffold	SC	SAMEA2674041	GCA_900027845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/845/GCA_900027845.1_14355_4_90	-	2842STDY5881047
Pseudomonas aeruginosa MW3a	1449980	PRJNA235238	235238	Proteobacteria	Gammaproteobacteria	6.6653	66.3	-	JAQK01	240	6413	6142	3/13/14	3/9/17	Contig	University of Malaya	SAMN02952973	GCA_000590905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/905/GCA_000590905.1_De_novo_Assembly	24744329	MW3a
Acinetobacter baumannii 339786	1310801	PRJNA194877	194877	Proteobacteria	Gammaproteobacteria	4.01657	39	-	JFXO01	89	3936	3706	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415067	GCA_000588055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/055/GCA_000588055.1_ASM58805v1	-	339786
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.1955	35.4	-	MBLC01	43	2234	2118	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481637	GCA_001694725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/725/GCA_001694725.1_ASM169472v1	27411639	IT-PW-086
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.06117	41.1	-	FIOI01	22	2073	1964	2/10/16	4/2/17	Contig	SC	SAMEA1566062	GCA_900058745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/745/GCA_900058745.1_8337_6_58	-	EN0114
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.82762	50.7	-	CWVD01	406	5456	4633	7/16/15	2/24/17	Scaffold	SC	SAMEA3345068	GCA_001257475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/475/GCA_001257475.1_Sg_201400029_TGACCA_L001	-	201400029_1
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.16247	68.2	-	CSKI01	77	7400	6887	3/23/15	3/26/17	Scaffold	SC	SAMEA1483602	GCA_001211385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/385/GCA_001211385.1_7910_5_23	-	DB19897/02
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.03231	47.5	-	CWSE01	51	3865	3708	7/16/15	3/26/17	Scaffold	SC	SAMEA889337	GCA_001254675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/675/GCA_001254675.1_5174_7_4	-	A5
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.13049	28.6	-	FABU01	639	3782	3605	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664132	GCA_900012165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/165/GCA_900012165.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.03868	45.3	-	MITH01	103	4776	4614	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368291	GCA_001728045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/045/GCA_001728045.1_ASM172804v1	-	CDC_K4857G
Klebsiella pneumoniae	573	PRJNA326415	326415	Proteobacteria	Gammaproteobacteria	5.80359	57.1827	plasmid pKp145/11a:NZ_KX154765.1/KX154765.1; plasmid pKp145/11b:NZ_KX118608.1/KX118608.1	MAOO01	1189	6148	5362	10/11/16	5/26/17	Scaffold	Adolfo Lutz Institute	SAMN05277828	GCA_001756835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/835/GCA_001756835.2_ASM175683v2	-	145
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.68576	38.5	-	NGMK01	10	2687	2480	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634038	GCA_002141115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/115/GCA_002141115.1_ASM214111v1	-	11F9_MSG5001
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.75906	67.7	-	CVJA01	564	3745	3136	4/2/15	3/27/17	Scaffold	SC	SAMEA751464	GCA_001333275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/275/GCA_001333275.1_6062_1_9	-	B301
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65935	31.4	-	FBBV01	21	1717	1626	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683109	GCA_001496195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/195/GCA_001496195.1_EC5604	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.8392	64.2	-	CSUV01	49	4869	4727	3/24/15	3/18/17	Scaffold	SC	SAMEA1464869	GCA_001213585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/585/GCA_001213585.1_7396_6_85	-	PAP037
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.46694	64.1	-	CSUW01	47	5583	5369	3/24/15	3/18/17	Scaffold	SC	SAMEA1464884	GCA_001213605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/605/GCA_001213605.1_7396_6_84	-	PAP036
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.71305	31.3	-	FBET01	20	1786	1703	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683187	GCA_001496215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/215/GCA_001496215.1_SS_2362	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.65957	67.4	-	CVJE01	1003	3763	2912	4/2/15	3/27/17	Scaffold	SC	SAMEA751465	GCA_001333295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/295/GCA_001333295.1_6062_1_10	-	B302
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.96613	38.3	-	NGMJ01	5	2920	2730	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634059	GCA_002141125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/125/GCA_002141125.1_ASM214112v1	-	11F4_DIV0686_a
Klebsiella pneumoniae	573	PRJNA345562	345562	Proteobacteria	Gammaproteobacteria	5.72793	57.1	-	MNCK01	107	5833	5587	10/29/16	2/21/17	Scaffold	"Xinhua Hospital, Shanghai Jiao Tong University School of Medicine"	SAMN05869364	GCA_001856585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/585/GCA_001856585.1_ASM185658v1	-	kp10
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.03977	45.3	-	MITI01	108	4785	4610	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368292	GCA_001728065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/065/GCA_001728065.1_ASM172806v1	-	CDC_K4857W
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.19933	29.3	-	FABZ01	1332	3831	3608	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664137	GCA_900012195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/195/GCA_900012195.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.98561	47.8	-	CWPC01	156	3767	3508	7/16/15	3/26/17	Scaffold	SC	SAMEA889366	GCA_001254815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/815/GCA_001254815.1_2956_6_3	-	4675
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08394	68.2	-	CSNQ01	72	7317	6787	3/23/15	3/26/17	Scaffold	SC	SAMEA807017	GCA_001211405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/405/GCA_001211405.1_7907_5_26	-	C26
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.66349	50.8	-	CXHO01	380	5215	4494	7/16/15	2/24/17	Scaffold	SC	SAMEA2004801	GCA_001257645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/645/GCA_001257645.1_8289_7_44	-	75679
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.03745	41.1	-	FIOJ01	25	2055	1948	2/10/16	3/19/17	Contig	SC	SAMEA1566054	GCA_900058755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/755/GCA_900058755.1_8337_6_57	-	EN068
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.20788	35.5	-	MBLB01	48	2297	2180	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481638	GCA_001694745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/745/GCA_001694745.1_ASM169474v1	27411639	IT-PW-097
Acinetobacter baumannii 1058283	1310771	PRJNA194847	194847	Proteobacteria	Gammaproteobacteria	4.13846	39	-	JFWR01	94	4061	3781	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415038	GCA_000588075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/075/GCA_000588075.1_ASM58807v1	-	1058283
Pseudomonas aeruginosa H1l	1416756	PRJNA226205	226205	Proteobacteria	Gammaproteobacteria	6.39883	66.4	-	AYML01	40	6096	5958	4/18/14	3/9/17	Contig	University of Malaya	SAMN02729854	GCA_000633495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/495/GCA_000633495.1_de_novo	-	H1l
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.17622	51.5	-	FESI01	108	2542	2162	2/9/16	3/21/17	Scaffold	SC	SAMEA2673792	GCA_900027855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/855/GCA_900027855.1_14355_5_8	-	2842STDY5881061
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63132	38.9	-	FLOK01	65	1628	1462	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3992713	GCA_900087545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/545/GCA_900087545.1_TC-2_8	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.99781	39.7	-	COCD02	108	2147	1954	3/23/15	3/5/17	Contig	SC	SAMEA1463061	GCA_001101965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/965/GCA_001101965.2_7622_3_63	-	CH2075
Escherichia coli MA6	1005557	PRJNA65983	65983	Proteobacteria	Gammaproteobacteria	5.38151	50.2	-	AMUF01	402	5828	5374	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00794597	GCA_000303975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/975/GCA_000303975.2_ASM30397v2	-	MA6
Mycobacterium tuberculosis UT0074	1438834	PRJNA233340	233340	Terrabacteria group	Actinobacteria	4.41992	65.6	-	JLMO01	71	4341	4133	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02567680	GCA_000656555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/555/GCA_000656555.1_Myco_tube_UT0074_V1	-	UT0074
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.99235	37.9	-	CWLA01	69	3037	2916	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466586	GCA_001497815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/815/GCA_001497815.1_2012_313587_7	-	-
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.60772	30.5	-	CZHN01	76	1678	1581	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556511	GCA_001408215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/408/215/GCA_001408215.1_8_S7	-	Campylobacter jejuni
Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312	871591	PRJNA51389	51389	Proteobacteria	Gammaproteobacteria	4.65162	52.2	-	AETO01	30	4708	4479	2/10/11	5/19/17	Contig	FDA	SAMN00710614	GCA_000189075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/075/GCA_000189075.2_ASM18907v2	21345093	2009083312
Staphylococcus aureus M0745	1388632	PRJNA216805	216805	Terrabacteria group	Firmicutes	2.83122	32.9	-	JAYT01	14	2928	2750	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325756	GCA_000531875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/875/GCA_000531875.1_Stap_aure_M0745_V1	-	M0745
Staphylococcus aureus M0776	1388633	PRJNA216806	216806	Terrabacteria group	Firmicutes	2.82853	32.8	-	JAYS01	20	2968	2808	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325757	GCA_000531895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/895/GCA_000531895.1_Stap_aure_M0776_V1	-	M0776
Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258	871592	PRJNA51391	51391	Proteobacteria	Gammaproteobacteria	4.65069	52.2	-	AETP01	34	4704	4482	2/10/11	5/19/17	Contig	FDA	SAMN00710615	GCA_000189095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/095/GCA_000189095.2_ASM18909v2	21345093	2009085258
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.6147	30.5	-	CZIO01	61	1691	1567	10/11/15	3/18/17	Contig	LSHTM	SAMEA3556514	GCA_001408235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/408/235/GCA_001408235.1_11_S10	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.11942	37.8	-	CWMJ01	274	3295	3076	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466577	GCA_001497995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/995/GCA_001497995.1_2012_306293_18	-	-
Mycobacterium tuberculosis UT0098	1438879	PRJNA233342	233342	Terrabacteria group	Actinobacteria	4.39779	65.6	-	JLMN01	75	4317	4110	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02567682	GCA_000656575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/575/GCA_000656575.1_Myco_tube_UT0098_V1	-	UT0098
Escherichia coli 5905	1005558	PRJNA65985	65985	Proteobacteria	Gammaproteobacteria	5.51523	50.3	-	AMUG01	350	5929	5432	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00794592	GCA_000303995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/303/995/GCA_000303995.2_ASM30399v2	-	5905
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.0267	39.7	-	CLHY01	67	2203	2000	3/21/15	3/4/17	Contig	SC	SAMEA1025728	GCA_001101985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/985/GCA_001101985.1_6925_6_17	-	SMRU2201
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63487	38.9	-	FLOW01	58	1621	1491	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3993946	GCA_900087575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/575/GCA_900087575.1_TC-1-1-2	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16552	51.5	-	FESU01	90	2531	2147	2/9/16	3/21/17	Scaffold	SC	SAMEA2673882	GCA_900027865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/865/GCA_900027865.1_14355_5_36	-	2842STDY5881089
Pseudomonas aeruginosa 148	1339263	PRJNA205831	205831	Proteobacteria	Gammaproteobacteria	6.6437	66.1	-	ATAJ02	126	6354	6109	4/23/14	6/22/17	Contig	Universidad Nacional Autonoma de Mexico	SAMN02732279	GCA_000647595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/595/GCA_000647595.2_PseAer148_2.0	"2,477,392,028,591,840"	148
Acinetobacter baumannii 1276470-86	1310769	PRJNA194845	194845	Proteobacteria	Gammaproteobacteria	4.06269	39.1	-	JFXE01	95	4017	3715	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415048	GCA_000588115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/115/GCA_000588115.1_ASM58811v1	-	1276470-86
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.02874	35.2	-	MBLA01	40	2085	1972	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481639	GCA_001694775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/775/GCA_001694775.1_ASM169477v1	27411639	NOVUI-1
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.07665	41.2	-	FIPN01	23	2100	1990	2/10/16	3/19/17	Contig	SC	SAMEA1566145	GCA_900058765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/765/GCA_900058765.1_8525_5_26	-	SS21
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.67468	50.6	-	CXFA01	413	5013	4466	7/16/15	2/24/17	Scaffold	SC	SAMEA954829	GCA_001257695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/695/GCA_001257695.1_5417_3_9	-	CS1_1361425
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.09577	68.2	-	CSRJ01	63	7320	6792	3/23/15	3/26/17	Scaffold	SC	SAMEA807043	GCA_001211505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/505/GCA_001211505.1_7909_4_20	-	C53
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.02732	47.5	-	CWNS01	61	3795	3619	7/16/15	3/26/17	Scaffold	SC	SAMEA889199	GCA_001254895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/895/GCA_001254895.1_4056_2_12	-	MG116025
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.27543	28.8	-	FACF01	391	3938	3786	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664142	GCA_900012225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/225/GCA_900012225.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	4.96124	45.4	-	MITJ01	89	4699	4545	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368293	GCA_001728085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/085/GCA_001728085.1_ASM172808v1	-	CDC_K4858
Klebsiella pneumoniae	573	PRJNA349237	349237	Proteobacteria	Gammaproteobacteria	5.56502	57.3	-	MNLG01	110	5684	5434	10/29/16	2/21/17	Scaffold	"Xinhua Hospital, Shanghai Jiao Tong University School of Medicine"	SAMN05929022	GCA_001856605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/605/GCA_001856605.1_ASM185660v1	-	KP6
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.73785	37.9	-	NGLT01	5	2794	2594	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634012	GCA_002141135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/135/GCA_002141135.1_ASM214113v1	-	1D8_DIV0466
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.71526	67.5	-	CVJC01	829	3765	3013	4/2/15	3/27/17	Scaffold	SC	SAMEA751468	GCA_001333315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/315/GCA_001333315.1_6062_1_5	-	B297
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.77248	31.2	-	FBEI01	42	1859	1757	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683175	GCA_001496235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/235/GCA_001496235.1_SS_2230	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.14632	64.1	-	CSVH01	27	5257	5054	3/24/15	3/18/17	Scaffold	SC	SAMEA1464915	GCA_001213625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/625/GCA_001213625.1_7396_6_96	-	PAP048
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.85212	64.1	-	CSUT01	18	4815	4668	3/24/15	3/18/17	Scaffold	SC	SAMEA1464856	GCA_001213665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/665/GCA_001213665.1_7396_6_81	-	PAP033
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.64093	31.4	-	FBMB01	19	1689	1599	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683378	GCA_001496255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/255/GCA_001496255.1_p494D	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.83445	67.9	-	CVIX01	302	3690	3310	4/2/15	3/27/17	Scaffold	SC	SAMEA751469	GCA_001333335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/335/GCA_001333335.1_6062_1_6	-	B298
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	3.12269	38.3	-	NGLS01	7	3083	2846	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634013	GCA_002141175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/175/GCA_002141175.1_ASM214117v1	-	1F1_DIV0518
Klebsiella pneumoniae	573	PRJNA350715	350715	Proteobacteria	Gammaproteobacteria	5.64073	57.2	-	MOLX01	129	5806	5537	11/5/16	2/21/17	Scaffold	"Xinhua Hospital, Shanghai Jiao Tong University School of Medicine"	SAMN05945258	GCA_001866785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/785/GCA_001866785.1_ASM186678v1	-	KP41
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.17943	45.3	-	MITK01	102	4904	4734	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368294	GCA_001728095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/095/GCA_001728095.1_ASM172809v1	-	CDC_K4859
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.10856	28.6	-	FACI01	878	3782	3610	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664145	GCA_900012235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/235/GCA_900012235.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.03017	47.8	-	CWRB01	203	3850	3116	7/16/15	3/26/17	Scaffold	SC	SAMEA889241	GCA_001254955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/955/GCA_001254955.1_4370_2_4	-	6197
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.09999	68.2	-	CSRH01	77	7328	6788	3/23/15	3/26/17	Scaffold	SC	SAMEA806998	GCA_001211565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/565/GCA_001211565.1_7907_5_10	-	C10
Shigella sonnei	624	PRJEB2460	204320	Proteobacteria	Gammaproteobacteria	4.55628	50.8	-	CXFP01	378	4943	4383	7/16/15	2/24/17	Scaffold	SC	SAMEA1027669	GCA_001257715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/715/GCA_001257715.1_6350_1_19	-	F3342_PFGE 5
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.06204	41.1	-	FIRG01	27	2080	1963	2/10/16	3/19/17	Contig	SC	SAMEA1566057	GCA_900058775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/775/GCA_900058775.1_8525_5_71	-	VS3309
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.07417	35.3	-	MBKZ01	45	2119	2012	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481640	GCA_001694785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/785/GCA_001694785.1_ASM169478v1	27411639	NOVUI-10
Acinetobacter baumannii 1295549	1310770	PRJNA194846	194846	Proteobacteria	Gammaproteobacteria	3.91679	39.1	-	JFXB01	30	3730	3551	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415052	GCA_000588135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/135/GCA_000588135.1_ASM58813v1	-	1295549
Pseudomonas aeruginosa ID4365	1339264	PRJNA205869	205869	Proteobacteria	Gammaproteobacteria	6.77663	66.1	-	ATAI01	172	6495	6232	4/23/14	3/16/17	Contig	Universidad Nacional Autonoma de Mexico	SAMN02732281	GCA_000647615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/615/GCA_000647615.1_PseAerID4365_1.0	24773920	ID4365
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16802	51.6	-	FETT01	87	2509	2167	2/9/16	3/19/17	Scaffold	SC	SAMEA2674050	GCA_900027875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/875/GCA_900027875.1_14355_5_94	-	2842STDY5881147
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63188	38.9	-	FLOV01	48	1617	1486	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3993951	GCA_900087585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/585/GCA_900087585.1_TC-1-2-1	-	-
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.13401	39.6	-	CKQE01	103	2410	2168	3/21/15	3/4/17	Contig	SC	SAMEA1024614	GCA_001102065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/065/GCA_001102065.1_6680_6_1	-	10F
Escherichia coli CB7326	1005559	PRJNA65987	65987	Proteobacteria	Gammaproteobacteria	5.39268	50.2	-	AMUH01	471	5849	5377	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00794589	GCA_000304015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/015/GCA_000304015.2_ASM30401v2	-	CB7326
Mycobacterium tuberculosis UT0101	1438892	PRJNA233343	233343	Terrabacteria group	Actinobacteria	4.40361	65.6	-	JLMM01	73	4320	4120	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02567683	GCA_000656595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/595/GCA_000656595.1_Myco_tube_UT0101_V1	-	UT0101
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.9832	37.8	-	CWKQ01	33	3029	2929	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466557	GCA_001498075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/075/GCA_001498075.1_2011_172904_14c	-	-
Campylobacter jejuni	197	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.77097	30.1	-	LBED01	71	1896	1745	10/27/15	3/18/17	Contig	FDA	SAMN03344561	GCA_001416835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/835/GCA_001416835.1_ASM141683v1	-	CVM N51684
Salmonella enterica subsp. enterica serovar Montevideo str. 315731156	871593	PRJNA51393	51393	Proteobacteria	Gammaproteobacteria	4.6506	52.2	-	AETQ01	40	4704	4463	2/10/11	5/19/17	Contig	FDA	SAMN00710616	GCA_000189115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/115/GCA_000189115.2_ASM18911v2	21345093	315731156
Staphylococcus aureus M0787	1388634	PRJNA216807	216807	Terrabacteria group	Firmicutes	2.89357	32.9	-	JAYR01	27	3052	2882	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02325758	GCA_000531915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/915/GCA_000531915.1_Stap_aure_M0787_V1	-	M0787
Staphylococcus aureus M0803	1388635	PRJNA216808	216808	Terrabacteria group	Firmicutes	2.8746	32.9	-	JAYQ01	18	3024	2864	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02325759	GCA_000531935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/935/GCA_000531935.1_Stap_aure_M0803_V1	-	M0803
Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199	882863	PRJNA51975	51975	Proteobacteria	Gammaproteobacteria	4.64324	52.2	-	AETR01	103	4739	4442	2/10/11	5/19/17	Contig	FDA	SAMN00710618	GCA_000189135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/135/GCA_000189135.2_ASM18913v2	21345093	IA_2009159199
Campylobacter jejuni	197	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.73027	30.5	-	LBEN01	55	1842	1718	10/27/15	3/18/17	Contig	FDA	SAMN03344551	GCA_001417165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/165/GCA_001417165.1_ASM141716v1	-	CVM N42547
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.9777	37.9	-	CWMG01	122	3036	2921	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466550	GCA_001498095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/095/GCA_001498095.1_2012_159044_14	-	-
Mycobacterium tuberculosis UT0103	1438877	PRJNA233344	233344	Terrabacteria group	Actinobacteria	4.40484	65.6	-	JLML01	77	4315	4117	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02567684	GCA_000656615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/615/GCA_000656615.1_Myco_tube_UT0103_V1	-	UT0103
Escherichia coli EC96038	1005560	PRJNA65989	65989	Proteobacteria	Gammaproteobacteria	5.31606	50.3	-	AMUI01	463	5747	5276	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00794594	GCA_000304035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/035/GCA_000304035.2_ASM30403v2	-	EC96038
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.04751	39.7	-	CMRQ01	84	2248	2030	3/23/15	3/4/17	Contig	SC	SAMEA2062173	GCA_001102085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/085/GCA_001102085.1_9803_8_47	-	19F
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63322	38.9	-	FLOY01	64	1620	1484	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3993950	GCA_900087595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/595/GCA_900087595.1_TC-1-1-6	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.10643	51.8	-	FEUN01	68	2440	2107	2/9/16	3/21/17	Scaffold	SC	SAMEA2673902	GCA_900027885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/885/GCA_900027885.1_14355_6_51	-	2842STDY5881200
Pseudomonas aeruginosa IGB83	1339265	PRJNA205870	205870	Proteobacteria	Gammaproteobacteria	6.48065	66.4	-	ATAH01	249	6312	6068	4/23/14	3/9/17	Contig	Universidad Nacional Autonoma de Mexico	SAMN02732282	GCA_000647635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/635/GCA_000647635.1_PseAerIGB83_1.0	24773920	IGB83
Acinetobacter baumannii 1232509	1310774	PRJNA194850	194850	Proteobacteria	Gammaproteobacteria	4.01527	39.1	-	JFWY01	95	3985	3717	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415044	GCA_000588155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/155/GCA_000588155.1_ASM58815v1	-	1232509
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.18996	35.3	-	MBKY01	46	2285	2139	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481641	GCA_001694815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/815/GCA_001694815.1_ASM169481v1	27411639	NOVUI-11
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.08181	41.1	-	FISQ01	30	2088	1970	2/10/16	3/19/17	Contig	SC	SAMEA1566120	GCA_900058785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/785/GCA_900058785.1_8337_6_89	-	FX51_2
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.5543	50.8	-	CWXM01	362	5016	4355	7/16/15	2/24/17	Scaffold	SC	SAMEA2445699	GCA_001257735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/735/GCA_001257735.1_12971_8_19	-	H084580209
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.30413	68	-	CSLJ01	77	7540	7035	3/23/15	3/26/17	Scaffold	SC	SAMEA949397	GCA_001211705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/705/GCA_001211705.1_7910_7_4	-	P169/04
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.97923	47.4	-	CWNL01	52	3784	3622	7/17/15	3/26/17	Scaffold	SC	SAMEA889372	GCA_001255155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/155/GCA_001255155.1_5174_7_9	-	A22
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.21002	28.6	-	FACJ01	317	3910	3777	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664149	GCA_900012255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/255/GCA_900012255.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	4.92855	45.4	-	MITL01	135	4663	4480	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368295	GCA_001728125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/125/GCA_001728125.1_ASM172812v1	-	CDC_K4981
Klebsiella pneumoniae	573	PRJNA342013	342013	Proteobacteria	Gammaproteobacteria	5.51327	57.1	-	MOXL01	99	5546	4880	11/10/16	4/10/17	Scaffold	Christian Medical College	SAMN05732389	GCA_001875525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/525/GCA_001875525.1_ASM187552v1	-	CMC_VB35168
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	3.053	39	-	NGLP01	58	2954	2669	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634073	GCA_002141195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/195/GCA_002141195.1_ASM214119v1	-	2E6_DIV0576
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.79731	67.8	-	CGFS01	625	3784	3188	3/15/15	3/27/17	Scaffold	SC	SAMEA751471	GCA_001333355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/355/GCA_001333355.1_5476_5_10	-	B048
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.77798	31.2	-	FBDV01	47	1860	1761	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683163	GCA_001496275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/275/GCA_001496275.1_SS_2351	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.32398	64.2	-	CSUR01	35	5372	5218	3/24/15	3/18/17	Scaffold	SC	SAMEA1464939	GCA_001213685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/685/GCA_001213685.1_7396_6_80	-	PAP032
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23153	64	-	CSVR01	37	5280	5086	3/24/15	3/18/17	Scaffold	SC	SAMEA1464902	GCA_001213705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/705/GCA_001213705.1_7396_7_19	-	PAP067
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.86389	30.9	-	FAZN01	86	1958	1824	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683049	GCA_001496295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/295/GCA_001496295.1_H044040580	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.71972	67.6	-	CGAE01	928	3772	3010	3/15/15	3/27/17	Scaffold	SC	SAMEA751473	GCA_001333375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/375/GCA_001333375.1_5476_5_12	-	B027
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.74533	38.6	-	NGLO01	5	2741	2510	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634072	GCA_002141255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/255/GCA_002141255.1_ASM214125v1	-	2F7_DIV0583
Klebsiella pneumoniae	573	PRJNA343697	343697	Proteobacteria	Gammaproteobacteria	5.57231	56.9	-	MNPC01	150	5669	5054	11/16/16	4/10/17	Scaffold	Christian Medical College	SAMN05792410	GCA_001879395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/395/GCA_001879395.1_ASM187939v1	-	PM1842
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.12554	45.3	-	MITM01	130	4880	4710	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368297	GCA_001728135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/135/GCA_001728135.1_ASM172813v1	-	CDC_K5009W
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.27698	29	-	FACS01	1779	3909	3637	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664148	GCA_900012265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/265/GCA_900012265.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.9986	47.5	-	CWSG01	61	3827	3674	7/16/15	3/26/17	Scaffold	SC	SAMEA889336	GCA_001255575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/575/GCA_001255575.1_5174_7_5	-	A6
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.09523	68.2	-	CSQB01	79	7321	6794	3/22/15	3/26/17	Scaffold	SC	SAMEA807014	GCA_001211865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/865/GCA_001211865.1_7907_5_29	-	C29
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.85701	50.7	-	CWUV01	392	5535	4674	7/17/15	2/24/17	Scaffold	SC	SAMEA3345062	GCA_001257755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/755/GCA_001257755.1_Sg_201312273_TATAAT_L001	-	201312273_1
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.12986	41.1	-	FIFN01	39	2126	1995	2/10/16	3/19/17	Contig	SC	SAMEA1316693	GCA_900059075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/075/GCA_900059075.1_7054_7_4	-	LSS100
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.036	35.3	-	MBKX01	27	2102	1967	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481642	GCA_001694825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/825/GCA_001694825.1_ASM169482v1	27411639	NOVUI-19
Acinetobacter baumannii 628418	1310755	PRJNA194831	194831	Proteobacteria	Gammaproteobacteria	4.16014	39.2	-	JFXX01	141	4161	3869	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415071	GCA_000588175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/175/GCA_000588175.1_ASM58817v1	-	628418
Pseudomonas aeruginosa M10	1339266	PRJNA205871	205871	Proteobacteria	Gammaproteobacteria	6.01866	66.8	-	ATAG01	529	5844	5424	4/23/14	3/9/17	Contig	Universidad Nacional Autonoma de Mexico	SAMN02732280	GCA_000647655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/655/GCA_000647655.1_PseAerM10_1.0	24773920	M10
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.27115	51.7	-	FEVP01	98	2641	2242	2/9/16	3/21/17	Scaffold	SC	SAMEA2674076	GCA_900027895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/895/GCA_900027895.1_14324_4_24	-	2842STDY5881269
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63269	38.9	-	FLPB01	64	1622	1489	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3993953	GCA_900087665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/665/GCA_900087665.1_TC-1-2-3	-	-
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.02288	39.8	-	CKUE01	53	2200	1990	3/21/15	3/4/17	Contig	SC	SAMEA1025733	GCA_001102225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/225/GCA_001102225.1_6823_2_18	-	SMRU1890
Escherichia coli 5412	1005561	PRJNA65991	65991	Proteobacteria	Gammaproteobacteria	5.38104	50.3	-	AMUJ01	372	5786	5342	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN02435973	GCA_000304055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/055/GCA_000304055.2_ASM30405v2	-	5412
Mycobacterium tuberculosis UT0119	1438867	PRJNA233345	233345	Terrabacteria group	Actinobacteria	4.36342	65.6	-	JLMK01	61	4288	4073	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02567685	GCA_000656635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/635/GCA_000656635.1_Myco_tube_UT0119_V1	-	UT0119
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.01189	37.9	-	CWLJ01	86	3098	2984	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466581	GCA_001498115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/115/GCA_001498115.1_2012_313587_16	-	-
Campylobacter jejuni	197	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.83931	30.1	-	LBEC01	99	1988	1816	10/27/15	3/18/17	Contig	FDA	SAMN03344562	GCA_001417285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/285/GCA_001417285.1_ASM141728v1	-	CVM N51691
Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282	882864	PRJNA51979	51979	Proteobacteria	Gammaproteobacteria	4.64501	52.2	-	AETS01	81	4724	4445	2/10/11	5/19/17	Contig	FDA	SAMN00710619	GCA_000189155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/155/GCA_000189155.2_ASM18915v2	21345093	IA_2010008282
Staphylococcus aureus M0816	1388636	PRJNA216809	216809	Terrabacteria group	Firmicutes	2.93816	32.9	-	JAYP01	22	3077	2891	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325760	GCA_000531955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/955/GCA_000531955.1_Stap_aure_M0816_V1	-	M0816
Staphylococcus aureus M0827	1388637	PRJNA216810	216810	Terrabacteria group	Firmicutes	2.85924	32.8	-	JAYO01	14	3006	2845	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325761	GCA_000531975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/975/GCA_000531975.1_Stap_aure_M0827_V1	-	M0827
Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283	882865	PRJNA51981	51981	Proteobacteria	Gammaproteobacteria	4.63847	52.2	-	AETT01	165	4761	4401	2/10/11	5/19/17	Contig	FDA	SAMN00710620	GCA_000189175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/175/GCA_000189175.2_ASM18917v2	21345093	IA_2010008283
Campylobacter jejuni CVM 41900	1323652	PRJNA232317	232317	Proteobacteria	delta/epsilon subdivisions	1.68237	30.5	-	JAKC01	59	1751	1615	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887128	GCA_001418835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/835/GCA_001418835.1_Campylobacter_jejuni_CVM_41900_v1.0	-	CVM 41900
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.99411	37.8	-	CWMV01	143	3078	2942	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466611	GCA_001498575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/575/GCA_001498575.1_2014_82197_3	-	-
Mycobacterium tuberculosis 2233BH	1438862	PRJNA233351	233351	Terrabacteria group	Actinobacteria	4.41605	65.6	-	JKBU01	82	4337	4136	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02567699	GCA_000656655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/655/GCA_000656655.1_Myco_tube_2233BH_V1	-	2233BH
Escherichia coli TW15901	1005562	PRJNA65993	65993	Proteobacteria	Gammaproteobacteria	4.89788	50.4	-	AMUK01	206	5195	4822	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00794593	GCA_000304075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/075/GCA_000304075.2_ASM30407v2	-	TW15901
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10667	39.6	-	CKPZ01	42	2319	2067	3/21/15	3/6/17	Contig	SC	SAMEA1024741	GCA_001102265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/265/GCA_001102265.1_6680_5_4	-	SMRU916
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63005	38.9	-	FLOS01	52	1624	1474	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3993949	GCA_900087695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/695/GCA_900087695.1_TC-1-1-5	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16242	51.5	-	FEWS01	95	2517	2162	2/9/16	3/21/17	Scaffold	SC	SAMEA2674328	GCA_900027905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/905/GCA_900027905.1_14555_6_88	-	2842STDY5881525
Pseudomonas aeruginosa NCAIM B.001380	1118159	PRJNA195719	195719	Proteobacteria	Gammaproteobacteria	6.98536	66.1	-	JMKR01	15	6727	6406	5/8/14	3/9/17	Contig	DOE Joint Genome Institute	SAMN02743347	GCA_000685845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/845/GCA_000685845.1_ASM68584v1	-	NCAIM B.001380
Acinetobacter baumannii 277047	1310781	PRJNA194857	194857	Proteobacteria	Gammaproteobacteria	3.90024	39.1	-	JFXS01	36	3717	3544	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415065	GCA_000588195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/195/GCA_000588195.1_ASM58819v1	-	277047
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.0163	35.2	-	MBKV01	41	2060	1957	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481644	GCA_001694855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/855/GCA_001694855.1_ASM169485v1	27411639	NOVUI-26
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.15594	41	-	FIHF01	88	2198	2041	2/10/16	3/19/17	Contig	SC	SAMEA1316549	GCA_900059085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/085/GCA_900059085.1_7114_5_56	-	LSS56
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.70796	50.8	-	CXHR01	381	5312	4519	7/16/15	2/24/17	Scaffold	SC	SAMEA2003375	GCA_001257775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/775/GCA_001257775.1_8289_7_48	-	75693
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.09342	68.2	-	CSSW01	74	7332	6783	3/22/15	3/26/17	Scaffold	SC	SAMEA807057	GCA_001212025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/025/GCA_001212025.1_7907_5_2	-	C2
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.02434	47.5	-	CWSA01	54	3816	3663	7/16/15	3/26/17	Scaffold	SC	SAMEA889392	GCA_001255835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/835/GCA_001255835.1_5174_6_9	-	4536
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.44925	29.3	-	FACQ01	1518	4239	3943	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664154	GCA_900012275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/275/GCA_900012275.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.12296	45.2	-	MITN01	146	4855	4705	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368298	GCA_001728155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/155/GCA_001728155.1_ASM172815v1	-	CDC_K5010G
Klebsiella pneumoniae	573	PRJNA343694	343694	Proteobacteria	Gammaproteobacteria	5.64293	57	-	MNPB01	158	5740	5112	11/16/16	4/10/17	Scaffold	Christian Medical College	SAMN05792405	GCA_001879405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/405/GCA_001879405.1_ASM187940v1	-	PM565
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	3.02024	37.6	-	NGLB01	9	3047	2857	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634003	GCA_002141335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/335/GCA_002141335.1_ASM214133v1	-	6F2_DIV0138
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.80946	67.8	-	CFXV01	508	3761	3226	3/15/15	3/27/17	Scaffold	SC	SAMEA751474	GCA_001333395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/395/GCA_001333395.1_5476_5_7	-	B042
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75451	31.1	-	FBLS01	32	1819	1697	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683370	GCA_001496315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/315/GCA_001496315.1_H075200514	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18804	64.2	-	CSTY01	46	5193	5041	3/24/15	3/18/17	Scaffold	SC	SAMEA1464971	GCA_001213725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/725/GCA_001213725.1_7396_6_59	-	PAP011
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.4698	64.1	-	CSUY01	35	5583	5377	3/24/15	3/18/17	Scaffold	SC	SAMEA1464893	GCA_001213745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/745/GCA_001213745.1_7396_6_89	-	PAP041
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.77234	31.2	-	FBEU01	32	1855	1754	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683180	GCA_001496355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/355/GCA_001496355.1_SS_2271	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.64443	67.4	-	CVJH01	1164	3738	2873	4/2/15	3/27/17	Scaffold	SC	SAMEA751478	GCA_001333415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/415/GCA_001333415.1_6062_1_3	-	B295
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.87319	38.5	-	NGLA01	8	2887	2650	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634004	GCA_002141355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/355/GCA_002141355.1_ASM214135v1	-	6H2_DIV0141
Klebsiella pneumoniae	573	PRJNA324074	324074	Proteobacteria	Gammaproteobacteria	5.49362	57.3532	plasmid pKp196; TIET-4200:NZ_KX397572.1/KX397572.1	LZCZ01	41	5629	5324	1/21/17	5/26/17	Scaffold	Adolfo Lutz Institute	SAMN05194650	GCA_001968745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/968/745/GCA_001968745.2_ASM196874v2	-	196
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.1186	45.2	-	MITO01	133	4849	4698	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368299	GCA_001728175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/175/GCA_001728175.1_ASM172817v1	-	CDC_K5010W
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.24861	29.1	-	FACV01	947	3847	3677	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664160	GCA_900012285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/285/GCA_900012285.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.0242	47.5	-	CWRI01	84	3797	3609	7/16/15	3/26/17	Scaffold	SC	SAMEA889156	GCA_001255915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/915/GCA_001255915.1_4370_3_8	-	7685
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.03178	68.3	-	CSLI01	56	7241	6739	3/22/15	3/26/17	Scaffold	SC	SAMEA949358	GCA_001212065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/065/GCA_001212065.1_6998_1_14	-	P6
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.73119	50.7	-	CXGY01	431	5316	4496	7/16/15	2/24/17	Scaffold	SC	SAMEA1324225	GCA_001257795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/795/GCA_001257795.1_7655_8_16	-	H113020318
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.11545	41.1	-	FIHJ01	53	2157	2014	2/10/16	3/19/17	Contig	SC	SAMEA1316651	GCA_900059095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/095/GCA_900059095.1_7114_5_61	-	LSS61
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.01652	35.2	-	MBKT01	43	2063	1961	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481647	GCA_001694875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/875/GCA_001694875.1_ASM169487v1	27411639	NOVUI-6
Acinetobacter baumannii 466215	1310785	PRJNA194861	194861	Proteobacteria	Gammaproteobacteria	4.02808	39.2	-	JFXP01	119	3999	3716	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415068	GCA_000588215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/215/GCA_000588215.1_ASM58821v1	-	466215
Pseudomonas aeruginosa MH38	1336203	PRJEB3405	232341	Proteobacteria	Gammaproteobacteria	6.88997	65.8	-	CBTQ01	141	6675	6342	1/2/14	3/16/17	Contig	CEBITEC	SAMEA3139010	GCA_000689435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/435/GCA_000689435.1_Contig	24625869	MH38
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16064	51.5	-	FEWT01	85	2501	2141	2/9/16	3/21/17	Scaffold	SC	SAMEA2674194	GCA_900027915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/915/GCA_900027915.1_14324_4_88	-	2842STDY5881333
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.6358	38.9	-	FLOQ01	60	1626	1486	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3993945	GCA_900087755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/755/GCA_900087755.1_TC-1-1-1	-	-
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10891	39.5	-	CLRR01	56	2312	2101	3/21/15	3/4/17	Contig	SC	SAMEA1028920	GCA_001102345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/345/GCA_001102345.1_6972_2_6	-	SMRU2550
Escherichia coli ARS4.2123	1005563	PRJNA65995	65995	Proteobacteria	Gammaproteobacteria	4.9773	50.5	-	AMUL01	208	5320	4962	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00806481	GCA_000304095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/095/GCA_000304095.2_ASM30409v2	-	ARS4.2123
Mycobacterium tuberculosis 3280CJ	1438873	PRJNA233353	233353	Terrabacteria group	Actinobacteria	4.48738	65.6	-	JKBS01	123	4442	4205	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02567701	GCA_000656675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/675/GCA_000656675.1_Myco_tube_3280CJ_V1	-	3280CJ
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.99907	37.9	-	CWND01	201	3092	2955	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466617	GCA_001498715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/715/GCA_001498715.1_2013_143044_6	-	-
Campylobacter jejuni CVM 41905	1440037	PRJNA232319	232319	Proteobacteria	delta/epsilon subdivisions	1.52549	31.1	-	JAKE01	339	1658	1365	10/29/15	4/10/17	Contig	FDA/CVM	SAMN02887130	GCA_001418905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/905/GCA_001418905.1_Campylobacter_jejuni_CVM_41905_v1.0	-	CVM 41905
Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284	882866	PRJNA51983	51983	Proteobacteria	Gammaproteobacteria	4.64248	52.2	-	AETU01	123	4735	4438	2/10/11	5/19/17	Contig	FDA	SAMN00710621	GCA_000189195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/195/GCA_000189195.2_ASM18919v2	21345093	IA_2010008284
Staphylococcus aureus M0849	1388638	PRJNA216811	216811	Terrabacteria group	Firmicutes	2.90884	33	-	JAYN01	11	3031	2869	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325762	GCA_000531995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/995/GCA_000531995.1_Stap_aure_M0849_V1	-	M0849
Staphylococcus aureus M0860	1388639	PRJNA216812	216812	Terrabacteria group	Firmicutes	2.98317	33	-	JAYM01	24	3187	3004	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325763	GCA_000532015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/015/GCA_000532015.1_Stap_aure_M0860_V1	-	M0860
Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285	882867	PRJNA51985	51985	Proteobacteria	Gammaproteobacteria	4.64868	52.2	-	AETV01	42	4711	4472	2/10/11	5/19/17	Contig	FDA	SAMN00710622	GCA_000189215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/215/GCA_000189215.2_ASM18921v2	21345093	IA_2010008285
Campylobacter jejuni CVM 41908	1440036	PRJNA232320	232320	Proteobacteria	delta/epsilon subdivisions	1.61622	30.9	-	JAKF01	366	1774	1483	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887131	GCA_001418915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/915/GCA_001418915.1_Campylobacter_jejuni_CVM_41908_v1.0	-	CVM 41908
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	3.02186	37.8	-	CWMI01	66	3121	2980	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466573	GCA_001498815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/815/GCA_001498815.1_2012_292995_18	-	-
Mycobacterium tuberculosis TKK_04_0125	1448587	PRJNA235592	235592	Terrabacteria group	Actinobacteria	4.39368	65.6	-	JJUB01	9	4279	4104	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586082	GCA_000656695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/695/GCA_000656695.1_Myco_tube_TKK_04_0125_V1	-	TKK_04_0125
Escherichia coli TW00353	1005564	PRJNA65997	65997	Proteobacteria	Gammaproteobacteria	5.0064	50.4	-	AMUM01	184	5350	4963	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00794596	GCA_000304115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/115/GCA_000304115.2_ASM30411v2	-	TW00353
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12118	39.6	-	COCM02	195	2323	2113	3/22/15	3/11/17	Contig	SC	SAMEA1463191	GCA_001102365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/365/GCA_001102365.2_7622_3_76	-	CH2124
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63542	38.9	-	FLOX01	75	1626	1488	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3993948	GCA_900087765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/765/GCA_900087765.1_TC-1-1-4	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.14402	51.8	-	FEWW01	68	2490	2145	2/9/16	3/21/17	Scaffold	SC	SAMEA2674201	GCA_900027925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/925/GCA_900027925.1_14324_4_91	-	2842STDY5881336
Pseudomonas aeruginosa	287	PRJNA244503	244503	Proteobacteria	Gammaproteobacteria	6.3415	66.5	-	JJOD01	138	6019	5863	6/5/14	3/9/17	Contig	International Centre for Genetic Engineering and Biotechnology	SAMN02726854	GCA_000698765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/765/GCA_000698765.1_PUPa3_1.0	24994800	PUPa3
Acinetobacter baumannii 14216	1310798	PRJNA194874	194874	Proteobacteria	Gammaproteobacteria	4.10012	39.1	-	JFXN01	64	4024	3779	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415057	GCA_000588235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/235/GCA_000588235.1_ASM58823v1	-	14216
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.10704	35.4	-	MBKU01	111	2171	2038	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481646	GCA_001694895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/895/GCA_001694895.1_ASM169489v1	27411639	NOVUI-5
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.09233	41.3	-	FIJA01	21	2121	1960	2/10/16	3/19/17	Contig	SC	SAMEA1316628	GCA_900059105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/105/GCA_900059105.1_7114_5_89	-	LSS89
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.67893	50.8	-	CXEM01	463	5024	4465	7/16/15	2/24/17	Scaffold	SC	SAMEA954598	GCA_001257815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/815/GCA_001257815.1_5417_2_4	-	20031275_1361395
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.21976	68.1	-	CSKV01	94	7530	6988	3/22/15	3/26/17	Scaffold	SC	SAMEA949317	GCA_001212185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/185/GCA_001212185.1_7915_5_12	-	21/96
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.01068	47.6	-	CWOD01	75	3817	3620	7/16/15	4/10/17	Scaffold	SC	SAMEA889268	GCA_001256015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/015/GCA_001256015.1_2956_6_5	-	4663
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.28775	29	-	FACY01	1989	3892	3623	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664161	GCA_900012295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/295/GCA_900012295.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.11457	45.3	-	MITP01	84	4836	4711	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368300	GCA_001728205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/205/GCA_001728205.1_ASM172820v1	-	CDC_K5058
Klebsiella pneumoniae	573	PRJNA324070	324070	Proteobacteria	Gammaproteobacteria	5.51659	57.3533	"plasmid pKP148,PINH-4900:NZ_KX062091.1/KX062091.1"	LZCY01	54	5653	5352	1/21/17	5/26/17	Scaffold	Adolfo Lutz Institute	SAMN05194617	GCA_001968755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/968/755/GCA_001968755.2_ASM196875v2	-	148
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.8347	39.4	-	NGKS01	53	2632	2369	5/16/17	5/23/17	Scaffold	Broad Institute	SAMN04634027	GCA_002141435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/435/GCA_002141435.1_ASM214143v1	-	9B2_DIV04862
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.74745	67.7	-	CGHO01	929	3783	3048	3/15/15	3/27/17	Scaffold	SC	SAMEA751479	GCA_001333435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/435/GCA_001333435.1_5476_6_3	-	B022
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65939	31.4	-	FAYY01	25	1717	1628	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683040	GCA_001496375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/375/GCA_001496375.1_H111620356	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.87608	64.1	-	CSUS01	62	4912	4763	3/24/15	3/18/17	Scaffold	SC	SAMEA1464956	GCA_001213765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/765/GCA_001213765.1_7396_6_79	-	PAP031
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23517	64	-	CSVV01	44	5285	5092	3/24/15	3/18/17	Scaffold	SC	SAMEA1464919	GCA_001213785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/785/GCA_001213785.1_7396_7_20	-	PAP068
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.81493	31	-	FBQL01	66	1905	1782	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683493	GCA_001496395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/395/GCA_001496395.1_H094280625	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.66822	67.5	-	CFXJ01	1206	3744	2895	3/15/15	3/27/17	Scaffold	SC	SAMEA751480	GCA_001333455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/455/GCA_001333455.1_5476_6_2	-	B050
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.83354	38.2	-	NIBO01	5	2766	2475	6/6/17	6/8/17	Scaffold	Broad Institute	SAMN04634005	GCA_002174355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/355/GCA_002174355.1_ASM217435v1	-	6E3_DIV0147
Klebsiella pneumoniae	573	PRJNA324148	324148	Proteobacteria	Gammaproteobacteria	5.65214	57.2	-	MUMM01	112	5813	5560	4/11/17	4/13/17	Scaffold	Geneva University Hospital	SAMN06293083	GCA_002085855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/855/GCA_002085855.1_ASM208585v1	28143787	KPN_KPC_HUG_08
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	4.95975	45.4	-	MITQ01	80	4740	4592	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368301	GCA_001728215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/215/GCA_001728215.1_ASM172821v1	-	CDC_K5059G
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.15651	28.6	-	FADB01	266	3805	3688	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664164	GCA_900012305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/305/GCA_900012305.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.98301	47.5	-	CWQI01	55	3760	3577	7/16/15	3/26/17	Scaffold	SC	SAMEA889173	GCA_001256355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/355/GCA_001256355.1_4075_3_3	-	PRL5
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.13206	68.2	-	CSJU01	83	7374	6887	3/23/15	3/26/17	Scaffold	SC	SAMEA1483596	GCA_001212265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/265/GCA_001212265.1_7910_5_28	-	8
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.69076	50.5	-	CWTQ01	404	5587	4382	7/16/15	2/24/17	Scaffold	SC	SAMEA3345042	GCA_001257855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/855/GCA_001257855.1_H14126044201	-	44201ss_1
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.03227	41.2	-	FIIT01	27	2034	1919	2/10/16	3/19/17	Contig	SC	SAMEA1316566	GCA_900059115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/115/GCA_900059115.1_7054_7_16	-	SS1002
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.18232	35.3	-	MBKW01	35	2227	2123	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481643	GCA_001694905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/905/GCA_001694905.1_ASM169490v1	27411639	NOVUI-2
Acinetobacter baumannii 573719	1310759	PRJNA194835	194835	Proteobacteria	Gammaproteobacteria	4.26219	39.1	-	JFYA01	62	4244	3926	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415070	GCA_000588275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/275/GCA_000588275.1_ASM58827v1	-	573719
Pseudomonas aeruginosa C2773C	1441459	PRJNA232482	232482	Proteobacteria	Gammaproteobacteria	6.71772	65.9	-	JGZW01	200	6567	6005	6/12/14	3/16/17	Contig	University of Texas at Austin	SAMN02485457	GCA_000705175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/175/GCA_000705175.1_RH_uta_asm_1-2773	-	C2773C
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11977	51.7	-	FEXK01	61	2460	2137	2/9/16	3/19/17	Scaffold	SC	SAMEA2674402	GCA_900027935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/935/GCA_900027935.1_14324_5_65	-	2842STDY5881598
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63035	38.9	-	FLOT01	64	1622	1490	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3993956	GCA_900087825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/825/GCA_900087825.1_TC-1-2-6	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.11152	39.5	-	CNNN02	235	2255	2049	3/23/15	3/5/17	Contig	SC	SAMEA1032506	GCA_001102445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/445/GCA_001102445.2_6925_1_64	-	R34-3046
Escherichia coli 3006	1005565	PRJNA65999	65999	Proteobacteria	Gammaproteobacteria	5.05757	50.6	-	AMUN01	294	5339	4907	10/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN00794590	GCA_000304135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/135/GCA_000304135.2_ASM30413v2	-	3006
Mycobacterium tuberculosis TKK_04_0126	1448588	PRJNA235593	235593	Terrabacteria group	Actinobacteria	4.39979	65.6	-	JJUA01	5	4293	4102	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586083	GCA_000656715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/715/GCA_000656715.1_Myco_tube_TKK_04_0126_V1	-	TKK_04_0126
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.95287	37.8	-	CWLW01	85	3045	2919	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466559	GCA_001499155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/155/GCA_001499155.1_2011_173331_7	-	-
Campylobacter jejuni CVM 41910	1440035	PRJNA232321	232321	Proteobacteria	delta/epsilon subdivisions	1.71842	30.5	-	JAKG01	71	1822	1685	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887132	GCA_001418925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/925/GCA_001418925.1_Campylobacter_jejuni_CVM_41910_v1.0	-	CVM 41910
Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287	882869	PRJNA51989	51989	Proteobacteria	Gammaproteobacteria	4.64565	52.2	-	AETW01	70	4720	4455	2/10/11	5/19/17	Contig	FDA	SAMN00710623	GCA_000189235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/235/GCA_000189235.2_ASM18923v2	21345093	IA_2010008287
Staphylococcus aureus M0864	1388641	PRJNA216814	216814	Terrabacteria group	Firmicutes	2.88573	32.8	-	JAYL01	21	3044	2885	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325765	GCA_000532035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/035/GCA_000532035.1_Stap_aure_M0864_V1	-	M0864
Staphylococcus aureus M0874	1388650	PRJNA216823	216823	Terrabacteria group	Firmicutes	2.92534	33	-	JAYK01	16	3076	2904	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02325774	GCA_000532055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/055/GCA_000532055.1_Stap_aure_M0874_V1	-	M0874
Salmonella enterica subsp. enterica serovar Montevideo str. 4441 H	766761	PRJNA49127	49127	Proteobacteria	Gammaproteobacteria	4.62566	52.2	-	AESY01	73	4708	4455	12/16/11	5/19/17	Contig	FDA	SAMN00754300	GCA_000238435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/435/GCA_000238435.2_ASM23843v2	22260654	4441 H
Campylobacter jejuni CVM 41912	1440034	PRJNA232322	232322	Proteobacteria	delta/epsilon subdivisions	1.7113	30.4	-	JAKH01	161	1837	1700	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887133	GCA_001418935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/935/GCA_001418935.1_Campylobacter_jejuni_CVM_41912_v1.0	-	CVM 41912
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.99413	37.9	-	CWMW01	402	3197	2897	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466606	GCA_001499335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/335/GCA_001499335.1_2014_60580_2A	-	-
Mycobacterium tuberculosis TKK_04_0129	1448589	PRJNA235594	235594	Terrabacteria group	Actinobacteria	4.41131	65.7	-	JJTZ01	1	4280	4114	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586084	GCA_000656735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/735/GCA_000656735.1_Myco_tube_TKK_04_0129_V1	-	TKK_04_0129
Escherichia coli 3.4870	1005450	PRJNA65713	65713	Proteobacteria	Gammaproteobacteria	5.33816	50.3	-	AMTD01	357	5747	5300	10/10/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN01036685	GCA_000304815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/815/GCA_000304815.2_ASM30481v2	-	3.487
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05209	39.7	-	CNRI02	144	2238	2042	3/22/15	3/11/17	Contig	SC	SAMEA1032632	GCA_001102585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/585/GCA_001102585.2_6999_1_20	-	R34-3203
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.6314	38.9	-	FLPA01	69	1621	1483	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3993954	GCA_900087835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/835/GCA_900087835.1_TC-1-2-4	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.20751	51.6	-	FEXU01	98	2597	2211	2/9/16	3/21/17	Scaffold	SC	SAMEA2674520	GCA_900027945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/945/GCA_900027945.1_14355_7_54	-	2842STDY5881683
Pseudomonas aeruginosa	287	PRJNA245482	245482	Proteobacteria	Gammaproteobacteria	6.22209	66.5	-	JMQH01	52	5914	5599	6/17/14	3/9/17	Contig	University of Delhi	SAMN02745922	GCA_000709285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/285/GCA_000709285.1_ASM70928v1	25189587	JMM
Acinetobacter baumannii 981176	1310792	PRJNA194868	194868	Proteobacteria	Gammaproteobacteria	4.13023	39.1	-	JFYH01	157	4197	3861	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415081	GCA_000588295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/295/GCA_000588295.1_ASM58829v1	-	981176
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.02291	35.2	-	MBKS01	48	2073	1955	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481648	GCA_001694935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/935/GCA_001694935.1_ASM169493v1	27411639	NOVUI-7
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.13827	41	-	FIJB01	90	2158	2028	2/10/16	3/19/17	Contig	SC	SAMEA1316640	GCA_900059125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/125/GCA_900059125.1_7054_7_18	-	SS1005
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.53691	50.6	-	CXBU01	396	4851	4317	7/16/15	2/24/17	Scaffold	SC	SAMEA954692	GCA_001257875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/875/GCA_001257875.1_5236_3_2	-	ShIB2018_440826
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.10163	68.2	-	CSOX01	70	7331	6789	3/22/15	3/26/17	Scaffold	SC	SAMEA807018	GCA_001212325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/325/GCA_001212325.1_7907_5_25	-	C25
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.91873	47.6	-	CWOT01	97	3740	3554	7/16/15	3/26/17	Scaffold	SC	SAMEA889374	GCA_001257035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/035/GCA_001257035.1_3002_8_1	-	4110
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.24257	28.7	-	FAJW01	992	3889	3718	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664342	GCA_900012355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/355/GCA_900012355.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	4.95395	45.4	-	MITR01	123	4713	4581	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368302	GCA_001728235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/235/GCA_001728235.1_ASM172823v1	-	CDC_K5059W
Klebsiella pneumoniae	573	PRJNA324148	324148	Proteobacteria	Gammaproteobacteria	5.69509	57	-	MUMN01	87	5853	5598	4/11/17	4/13/17	Scaffold	Geneva University Hospital	SAMN06293086	GCA_002085865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/865/GCA_002085865.1_ASM208586v1	28143787	KPN_KPC_HUG_09
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.74476	38.6	-	NIBJ01	17	2752	2517	6/6/17	6/8/17	Scaffold	Broad Institute	SAMN04634044	GCA_002174435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/435/GCA_002174435.1_ASM217443v1	-	10E8_DIV0421
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.78102	67.8	-	CFWW01	795	3805	3148	3/15/15	3/27/17	Scaffold	SC	SAMEA751482	GCA_001333495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/495/GCA_001333495.1_5633_2_7	-	B001
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.54795	31.8	-	FBOR01	21	1552	1494	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683441	GCA_001496435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/435/GCA_001496435.1_H043560441	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.87749	64.1	-	CSUM01	54	4909	4760	3/24/15	3/18/17	Scaffold	SC	SAMEA1464970	GCA_001213805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/805/GCA_001213805.1_7396_6_73	-	PAP025
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.25101	64.1	-	CSUG01	17	5299	5172	3/24/15	3/18/17	Scaffold	SC	SAMEA1464969	GCA_001213825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/825/GCA_001213825.1_7396_6_68	-	PAP020
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.6607	31.4	-	FBCB01	21	1722	1628	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683115	GCA_001496475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/475/GCA_001496475.1_EC4868	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.72903	67.7	-	CHLA01	932	3738	3025	4/21/15	3/27/17	Scaffold	SC	SAMEA751484	GCA_001333515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/515/GCA_001333515.1_5633_3_3	-	B167
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.73141	38.5	-	NIBM01	6	2731	2520	6/6/17	6/8/17	Scaffold	Broad Institute	SAMN04634071	GCA_002174445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/445/GCA_002174445.1_ASM217444v1	-	2H7_DIV0585
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA324148	324148	Proteobacteria	Gammaproteobacteria	5.6858	57.1	-	MUMP01	115	5846	5588	4/11/17	4/13/17	Scaffold	Geneva University Hospital	SAMN06293102	GCA_002085895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/895/GCA_002085895.1_ASM208589v1	28143787	KPN_KPC_HUG_11
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.02858	45.3	-	MITS01	143	4744	4541	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368303	GCA_001728255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/255/GCA_001728255.1_ASM172825v1	-	CDC_K5067
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.29146	29.1	-	CZYM01	1793	3883	3610	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664044	GCA_900012435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/435/GCA_900012435.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.02275	47.5	-	CWSN01	50	3807	3666	7/16/15	3/26/17	Scaffold	SC	SAMEA889164	GCA_001257075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/075/GCA_001257075.1_5174_8_6	-	A488(1)
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.27917	67.9	-	CSKM01	51	7495	6997	3/22/15	3/26/17	Scaffold	SC	SAMEA949367	GCA_001212405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/405/GCA_001212405.1_6998_1_16	-	EY1
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.47154	50.8	-	CXKR01	370	5006	4224	7/16/15	2/24/17	Scaffold	SC	SAMEA2004901	GCA_001257915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/915/GCA_001257915.1_8290_4_50	-	SHI0146_5648321
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.03214	41.2	-	FIJH01	19	2026	1921	2/10/16	3/19/17	Contig	SC	SAMEA1316669	GCA_900059135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/135/GCA_900059135.1_7054_7_22	-	SS1010
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.02948	35.2	-	MBKR01	45	2078	1968	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481649	GCA_001694945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/945/GCA_001694945.1_ASM169494v1	27411639	NOVUI-8
Acinetobacter baumannii 70136	1310787	PRJNA194863	194863	Proteobacteria	Gammaproteobacteria	4.06735	39	-	JFYK01	70	3999	3771	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415072	GCA_000588315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/315/GCA_000588315.1_ASM58831v1	-	70136
Pseudomonas aeruginosa	287	PRJNA237739	237739	Proteobacteria	Gammaproteobacteria	6.92955	66	-	JNHD01	123	6725	6521	8/5/14	3/16/17	Contig	Hospital Universitario 12 de Octubre	SAMN02738247	GCA_000737795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/795/GCA_000737795.1_PA_ST235_v.05	25359914	PA_ST235
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15465	51.6	-	FEYA01	90	2511	2147	2/9/16	3/21/17	Scaffold	SC	SAMEA2674555	GCA_900027955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/955/GCA_900027955.1_14355_7_89	-	2842STDY5881718
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63102	38.9	-	FLOU01	66	1622	1486	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3993955	GCA_900087845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/845/GCA_900087845.1_TC-1-2-5	-	-
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11353	39.6	-	CMIC01	57	2348	2112	3/23/15	3/11/17	Contig	SC	SAMEA1029455	GCA_001102785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/785/GCA_001102785.1_7038_6_4	-	SMRU2980
Escherichia coli 5.2239	1005452	PRJNA65717	65717	Proteobacteria	Gammaproteobacteria	5.3169	50.3	-	AMTE01	413	5678	5245	10/10/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN01036692	GCA_000304875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/875/GCA_000304875.2_ASM30487v2	-	5.2239
Mycobacterium tuberculosis TKK_04_0130	1448590	PRJNA235595	235595	Terrabacteria group	Actinobacteria	4.4018	65.6	-	JJTY01	1	4277	4114	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586085	GCA_000656755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/755/GCA_000656755.1_Myco_tube_TKK_04_0130_V1	-	TKK_04_0130
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.98722	37.9	-	CWMT01	295	3098	2905	12/12/15	3/1/17	Contig	IZSLER	SAMEA3466605	GCA_001499495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/495/GCA_001499495.1_2014_60580_2	-	-
Campylobacter jejuni CVM 41914	1440033	PRJNA232324	232324	Proteobacteria	delta/epsilon subdivisions	1.72219	30.4	-	JAKI01	78	1831	1686	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887134	GCA_001418985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/418/985/GCA_001418985.1_Campylobacter_jejuni_CVM_41914_v1.0	-	CVM 41914
Salmonella enterica subsp. enterica serovar Montevideo str. 42N	763921	PRJNA48461	48461	Proteobacteria	Gammaproteobacteria	4.70985	52.3	-	AESX01	80	4805	4551	12/16/11	5/19/17	Contig	FDA	SAMN00754299	GCA_000238455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/455/GCA_000238455.2_ASM23845v2	22260654	42N
Staphylococcus aureus M0884	1388658	PRJNA216831	216831	Terrabacteria group	Firmicutes	2.85529	32.8	-	JAYJ01	20	3009	2847	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325782	GCA_000532075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/075/GCA_000532075.1_Stap_aure_M0884_V1	-	M0884
Staphylococcus aureus M0896	1388669	PRJNA216842	216842	Terrabacteria group	Firmicutes	2.83392	32.9	-	JAYI01	17	2927	2738	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02325793	GCA_000532095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/095/GCA_000532095.1_Stap_aure_M0896_V1	-	M0896
Salmonella enterica subsp. enterica serovar Montevideo str. 29N	763920	PRJNA48459	48459	Proteobacteria	Gammaproteobacteria	4.5761	52.3	-	AESW01	78	4657	4402	12/16/11	5/19/17	Contig	FDA	SAMN00754298	GCA_000238475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/475/GCA_000238475.2_ASM23847v2	22260654	29N
Campylobacter jejuni CVM 41918	1440032	PRJNA232325	232325	Proteobacteria	delta/epsilon subdivisions	1.61369	30.5	-	JAKJ01	75	1693	1552	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887135	GCA_001419025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/025/GCA_001419025.1_Campylobacter_jejuni_CVM_41918_v1.0	-	CVM 41918
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.95199	37.9	-	LNPM01	11	3021	2933	2/9/16	3/1/17	Contig	FDA	SAMN03278634	GCA_001555535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/535/GCA_001555535.1_ASM155553v1	26950338	FDA00008711
Mycobacterium tuberculosis TKK_04_0131	1448591	PRJNA235596	235596	Terrabacteria group	Actinobacteria	4.38895	65.6	-	JJTX01	78	4315	4112	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586086	GCA_000656775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/775/GCA_000656775.1_Myco_tube_TKK_04_0131_V1	-	TKK_04_0131
Escherichia coli 6.0172	1005455	PRJNA65723	65723	Proteobacteria	Gammaproteobacteria	5.33982	50.3	-	AMTF01	379	5743	5304	10/10/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN01036878	GCA_000305155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/155/GCA_000305155.2_ASM30515v2	-	6.0172
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.99289	39.7	-	COBM02	109	2177	1978	3/23/15	3/5/17	Contig	SC	SAMEA1463259	GCA_001102805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/805/GCA_001102805.2_7622_2_44	-	BR1117
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63209	38.9	-	FLOR01	58	1619	1486	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3993947	GCA_900087885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/885/GCA_900087885.1_TC-1-1-3	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.17902	51.5	-	FEZO01	95	2513	2170	2/9/16	3/21/17	Scaffold	SC	SAMEA2674195	GCA_900027965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/965/GCA_900027965.1_14555_5_31	-	2842STDY5881372
Pseudomonas aeruginosa	287	PRJEB6517	258068	Proteobacteria	Gammaproteobacteria	7.26706	65.8	-	CCVU01	4	7055	6806	9/3/14	3/16/17	Contig	UB	SAMEA2592368	GCA_000751715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/715/GCA_000751715.1_HGAP_corrected	-	-
Acinetobacter baumannii 1406589	1310760	PRJNA194836	194836	Proteobacteria	Gammaproteobacteria	4.16749	39.1	-	JFYI01	179	4057	3767	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415082	GCA_000588355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/355/GCA_000588355.1_ASM58835v1	-	1406589
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.08532	35.3	-	MBKQ01	20	2132	2003	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481650	GCA_001694975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/975/GCA_001694975.1_ASM169497v1	27411639	SH4090
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.15606	41	-	FIKJ01	37	2161	1993	2/10/16	3/19/17	Contig	SC	SAMEA1316538	GCA_900059155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/155/GCA_900059155.1_7054_7_41	-	SS1041
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.58629	50.8	-	CXBJ01	433	4878	4373	7/16/15	2/24/17	Scaffold	SC	SAMEA954862	GCA_001257935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/935/GCA_001257935.1_5236_1_1	-	ShIB695_440727
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.2285	68.1	-	CSKX01	89	7527	7000	3/22/15	3/26/17	Scaffold	SC	SAMEA949292	GCA_001212465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/465/GCA_001212465.1_7910_7_27	-	Feb-96
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.03912	47.5	-	CWNU01	56	3810	3618	7/16/15	3/26/17	Scaffold	SC	SAMEA889232	GCA_001257215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/215/GCA_001257215.1_4056_2_1	-	A330
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	3.88015	28.3	-	CZYN01	322	3537	3385	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664049	GCA_900012445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/445/GCA_900012445.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.08215	45.2	-	MITT01	117	4786	4597	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368304	GCA_001728275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/275/GCA_001728275.1_ASM172827v1	-	CDC_K5073
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA324148	324148	Proteobacteria	Gammaproteobacteria	5.56582	57.2	-	MUMO01	93	5707	5478	4/11/17	4/13/17	Scaffold	Geneva University Hospital	SAMN06293090	GCA_002085915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/915/GCA_002085915.1_ASM208591v1	28143787	KPN_KPC_HUG_10
Enterococcus faecium	1352	PRJNA313452	313452	Terrabacteria group	Firmicutes	2.74903	39.1	-	NKCM01	21	2630	2338	7/10/17	7/12/17	Scaffold	Broad Institute	SAMN04634047	GCA_002216245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/245/GCA_002216245.1_ASM221624v1	-	10D4_DIV0388
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.74585	67.7	-	CFXT01	688	3758	3108	3/15/15	3/27/17	Scaffold	SC	SAMEA751486	GCA_001333535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/535/GCA_001333535.1_5515_7_5	-	B140
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.85252	31	-	FBOP01	69	1955	1835	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683439	GCA_001496495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/495/GCA_001496495.1_H072620568	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.85314	64.1	-	CSVD01	21	4817	4673	3/24/15	3/18/17	Scaffold	SC	SAMEA1464835	GCA_001213845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/845/GCA_001213845.1_7396_6_92	-	PAP044
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.84008	64.1	-	CSVE01	69	4870	4722	3/24/15	3/18/17	Scaffold	SC	SAMEA1464972	GCA_001213865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/865/GCA_001213865.1_7396_6_93	-	PAP045
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68617	31.4	-	FAZV01	22	1745	1654	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683054	GCA_001496515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/515/GCA_001496515.1_H062180535	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.75167	67.7	-	CHFH01	844	3783	3090	4/21/15	3/27/17	Scaffold	SC	SAMEA751488	GCA_001333555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/555/GCA_001333555.1_5515_7_3	-	B138
Enterococcus faecium	1352	PRJNA395133	395133	Terrabacteria group	Firmicutes	2.74824	38	-	NNSQ01	364	2894	2579	8/22/17	8/24/17	Scaffold	Institute of cellular and intracellular symbiosis UrD RAS	SAMN07370776	GCA_002265255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/255/GCA_002265255.1_ASM226525v1	-	ICIS 96
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA324148	324148	Proteobacteria	Gammaproteobacteria	5.75347	57.1	-	MUMQ01	127	5913	5651	4/11/17	4/13/17	Scaffold	Geneva University Hospital	SAMN06293108	GCA_002085935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/935/GCA_002085935.1_ASM208593v1	28143787	KPN_KPC_HUG_12
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.13487	45.3	-	MITU01	134	4884	4714	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368305	GCA_001728295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/295/GCA_001728295.1_ASM172829v1	-	CDC_K5125
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.24101	29	-	CZYX01	1258	3807	3627	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664056	GCA_900012455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/455/GCA_900012455.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.99542	47.6	-	CWOJ01	74	3776	3271	7/17/15	3/26/17	Scaffold	SC	SAMEA889203	GCA_001257255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/255/GCA_001257255.1_4056_2_5	-	V109
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.05186	68.2	-	CSKP01	83	7312	6803	3/23/15	3/26/17	Scaffold	SC	SAMEA949362	GCA_001212705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/705/GCA_001212705.1_6998_1_18	-	EY3
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.76449	50.7	-	CWVZ01	398	5331	4567	7/16/15	2/24/17	Scaffold	SC	SAMEA3345093	GCA_001257995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/995/GCA_001257995.1_Sg_201403834_CAAAAG_L001	-	201403834_1
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	1.97694	41.2	-	FILD01	25	1975	1882	2/10/16	3/19/17	Contig	SC	SAMEA1316653	GCA_900059165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/165/GCA_900059165.1_7054_7_60	-	SS1072
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.18073	35.5	-	MBKI01	47	2260	2153	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481624	GCA_001694985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/985/GCA_001694985.1_ASM169498v1	27411639	DK-PW-167
Acinetobacter baumannii 98826	1310793	PRJNA194869	194869	Proteobacteria	Gammaproteobacteria	4.07859	39.3	-	JFYJ01	110	4042	3778	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415083	GCA_000588375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/375/GCA_000588375.1_ASM58837v1	-	98826
Pseudomonas aeruginosa	287	PRJNA255994	255994	Proteobacteria	Gammaproteobacteria	6.41075	66.3	-	JPQQ01	224	6211	5904	9/22/14	3/16/17	Contig	UDRI	SAMN02767933	GCA_000756575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/756/575/GCA_000756575.1_ASM75657v1	25377703	ATCC 33988
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11784	51.8	-	FFAA01	93	2472	2152	2/9/16	3/19/17	Scaffold	SC	SAMEA2674228	GCA_900027975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/975/GCA_900027975.1_14555_5_44	-	2842STDY5881385
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.64169	38.9	-	FLOZ01	97	1624	1486	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3993952	GCA_900087925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/925/GCA_900087925.1_TC-1-2-2	-	-
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.14502	39.6	-	CMSP01	43	2368	2093	3/23/15	3/11/17	Contig	SC	SAMEA2062393	GCA_001102965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/965/GCA_001102965.1_9803_8_71	-	5
Escherichia coli 8.0566	1005462	PRJNA65737	65737	Proteobacteria	Gammaproteobacteria	4.72517	50.8	-	AMTG01	124	4934	4651	10/10/12	2/22/17	Scaffold	Institute for Genome Sciences	SAMN01036886	GCA_000305175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/175/GCA_000305175.1_ASM30517v1	-	8.0566
Mycobacterium tuberculosis TKK_04_0132	1448592	PRJNA235597	235597	Terrabacteria group	Actinobacteria	4.40096	65.6	-	JJTW01	1	4279	4115	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586087	GCA_000656795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/795/GCA_000656795.1_Myco_tube_TKK_04_0132_V1	-	TKK_04_0132
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.91035	37.9	-	LNPO01	21	2948	2852	2/9/16	3/1/17	Contig	FDA	SAMN03278636	GCA_001555575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/575/GCA_001555575.1_ASM155557v1	26950338	FDA00008713
Campylobacter jejuni CVM 41921	1440031	PRJNA232327	232327	Proteobacteria	delta/epsilon subdivisions	1.74222	30.3	-	JAKK01	189	1860	1661	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887136	GCA_001419065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/065/GCA_001419065.1_Campylobacter_jejuni_CVM_41921_v1.0	-	CVM 41921
Salmonella enterica subsp. enterica serovar Montevideo str. SARB30	749947	PRJNA46917	46917	Proteobacteria	Gammaproteobacteria	4.74476	52.2	-	AESU01	61	4865	4619	12/16/11	5/19/17	Contig	FDA	SAMN00754297	GCA_000238495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/495/GCA_000238495.2_ASM23849v2	22260654	SARB30
Staphylococcus aureus M0908	1388680	PRJNA216853	216853	Terrabacteria group	Firmicutes	2.90345	33	-	JAYH01	18	3040	2875	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02325804	GCA_000532115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/115/GCA_000532115.1_Stap_aure_M0908_V1	-	M0908
Staphylococcus aureus M0915	1388686	PRJNA216859	216859	Terrabacteria group	Firmicutes	2.83601	33	-	JAYG01	5	2938	2774	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325810	GCA_000532135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/135/GCA_000532135.1_Stap_aure_M0915_V1	-	M0915
Salmonella enterica subsp. enterica serovar Montevideo str. LQC 10	749948	PRJNA46915	46915	Proteobacteria	Gammaproteobacteria	4.60706	52.3	-	AEST01	53	4681	4452	12/16/11	5/19/17	Contig	FDA	SAMN00754296	GCA_000238515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/515/GCA_000238515.2_ASM23851v2	22260654	LQC 10
Campylobacter jejuni CVM 41922	1440030	PRJNA232328	232328	Proteobacteria	delta/epsilon subdivisions	1.72987	30.4	-	JAKL01	56	1821	1695	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887137	GCA_001419085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/085/GCA_001419085.1_Campylobacter_jejuni_CVM_41922_v1.0	-	CVM 41922
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.95786	37.9	-	LNPP01	18	3040	2941	2/9/16	3/1/17	Contig	FDA	SAMN03278637	GCA_001555585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/585/GCA_001555585.1_ASM155558v1	26950338	FDA00008714
Mycobacterium tuberculosis TKK_04_0134	1448593	PRJNA235598	235598	Terrabacteria group	Actinobacteria	4.39051	65.6	-	JJTV01	88	4325	4105	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586088	GCA_000656815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/815/GCA_000656815.1_Myco_tube_TKK_04_0134_V1	-	TKK_04_0134
Escherichia coli 8.0569	1005464	PRJNA65741	65741	Proteobacteria	Gammaproteobacteria	4.72935	50.8	-	AMTH01	116	4931	4660	10/10/12	2/22/17	Scaffold	Institute for Genome Sciences	SAMN01036879	GCA_000305355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/355/GCA_000305355.1_ASM30535v1	-	8.0569
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14669	39.5	-	CKNY01	67	2362	2116	3/21/15	3/11/17	Contig	SC	SAMEA1024201	GCA_001102985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/985/GCA_001102985.1_6673_8_17	-	SMRU257
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63405	38.9	-	FLPQ01	62	1622	1492	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3995857	GCA_900087935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/935/GCA_900087935.1_TC-3-1	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12824	51.7	-	FFBF01	81	2514	2179	2/9/16	3/19/17	Scaffold	SC	SAMEA2674290	GCA_900027985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/985/GCA_900027985.1_14555_5_75	-	2842STDY5881416
Pseudomonas aeruginosa	287	PRJNA243999	243999	Proteobacteria	Gammaproteobacteria	6.41171	66	-	JMBS02	72	6321	6063	9/30/14	3/16/17	Contig	Center for Cellular and Molecular Biology(CCMB)	SAMN02720833	GCA_000760495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/495/GCA_000760495.2_ASM76049v2	25573941	P7-L633/96
Acinetobacter baumannii 303002	1310794	PRJNA194870	194870	Proteobacteria	Gammaproteobacteria	3.8871	39.2	-	JFXW01	98	3803	3537	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415066	GCA_000588435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/435/GCA_000588435.1_ASM58843v1	-	303002
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.18146	35.4	-	MBKJ01	66	2226	2136	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481625	GCA_001695015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/015/GCA_001695015.1_ASM169501v1	27411639	ES-NI-012
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.01598	41.2	-	FINJ01	25	2048	1935	2/10/16	3/19/17	Contig	SC	SAMEA1566023	GCA_900059175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/175/GCA_900059175.1_8337_6_32	-	BM362a
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.74885	50.7	-	CXIV01	385	5371	4578	7/16/15	2/24/17	Scaffold	SC	SAMEA2004850	GCA_001258015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/015/GCA_001258015.1_8289_7_80	-	86278
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.11963	68.2	-	CSKF01	75	7344	6831	3/22/15	3/26/17	Scaffold	SC	SAMEA1483584	GCA_001262275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/275/GCA_001262275.1_7910_5_20	-	4094-225
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.03264	47.5	-	CWQZ01	48	3830	3672	7/16/15	3/26/17	Scaffold	SC	SAMEA889237	GCA_001257835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/835/GCA_001257835.1_4370_2_8	-	6193
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.17244	28.7	-	FACL01	924	3794	3640	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664152	GCA_900012465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/465/GCA_900012465.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.14376	45.2	-	MITV01	152	4864	4628	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368306	GCA_001728325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/325/GCA_001728325.1_ASM172832v1	-	CDC_K5126
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA324148	324148	Proteobacteria	Gammaproteobacteria	5.71393	57	-	MUMR01	110	5874	5604	4/11/17	4/13/17	Scaffold	Geneva University Hospital	SAMN06293116	GCA_002085975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/975/GCA_002085975.1_ASM208597v1	28143787	KPN_KPC_HUG_13
Enterococcus faecium	1352	PRJEB18118	355259	Terrabacteria group	Firmicutes	3.32434	38	-	FQST01	1175	3245	2801	11/30/16	3/28/17	Scaffold	FRCC PCM	SAMEA4560677	GCA_900128805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/805/GCA_900128805.1_Efaecium0.5	-	-
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.64048	67.4	-	CFYG01	1113	3726	2874	3/15/15	3/27/17	Scaffold	SC	SAMEA751490	GCA_001333575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/575/GCA_001333575.1_5515_7_1	-	B136
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.56353	31.8	-	FBHG01	25	1570	1507	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683254	GCA_001496555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/555/GCA_001496555.1_H060960757	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.29027	64.2	-	CSVN01	31	5333	5172	3/24/15	3/18/17	Scaffold	SC	SAMEA1464834	GCA_001213885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/885/GCA_001213885.1_7396_7_14	-	PAP062
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.29846	64.2	-	CSTX01	31	5331	5183	3/24/15	3/18/17	Scaffold	SC	SAMEA1464925	GCA_001213945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/945/GCA_001213945.1_7396_6_56	-	PAP008
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.7553	31.2	-	FBOZ01	31	1831	1745	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683454	GCA_001496575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/575/GCA_001496575.1_H090520713	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.70071	67.6	-	CIKU01	876	3747	2996	4/21/15	3/27/17	Scaffold	SC	SAMEA751492	GCA_001333595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/595/GCA_001333595.1_5515_6_11	-	B134
Enterococcus faecium	1352	PRJEB18118	355259	Terrabacteria group	Firmicutes	3.19609	37.4	-	FQTZ01	224	3295	3028	12/2/16	3/28/17	Scaffold	FRCC PCM	SAMEA4560911	GCA_900128935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/935/GCA_900128935.1_Hp_76-17_S13_	-	-
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA324148	324148	Proteobacteria	Gammaproteobacteria	5.53106	57.2	-	MUMS01	68	5668	5455	4/11/17	4/13/17	Scaffold	Geneva University Hospital	SAMN06293538	GCA_002085995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/995/GCA_002085995.1_ASM208599v1	28143787	KPN_KPC_HUG_B1
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.16847	45.2	-	MITW01	136	4965	4806	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368307	GCA_001728335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/335/GCA_001728335.1_ASM172833v1	-	CDC_K5276
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.22318	28.8	-	FAEX01	1343	3851	3628	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664212	GCA_900012475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/475/GCA_900012475.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.03134	47.5	-	CWRL01	57	3838	3686	7/16/15	3/26/17	Scaffold	SC	SAMEA889226	GCA_001257895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/895/GCA_001257895.1_5174_5_4	-	4593
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.05085	68.2	-	CSLB01	61	7266	6765	3/22/15	3/26/17	Scaffold	SC	SAMEA949320	GCA_001262315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/315/GCA_001262315.1_7915_5_15	-	457/96
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.43891	50.8	-	CXDC01	351	4713	4257	7/16/15	2/24/17	Scaffold	SC	SAMEA954674	GCA_001258035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/035/GCA_001258035.1_5236_7_1	-	Sh1173_441038
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04863	41.2	-	FINT01	24	2051	1951	2/10/16	3/19/17	Contig	SC	SAMEA1566024	GCA_900059185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/185/GCA_900059185.1_8337_6_43	-	BM461
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.11659	35.4	-	MBKK01	62	2140	2044	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481626	GCA_001695025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/025/GCA_001695025.1_ASM169502v1	27411639	ES-NI-013
Acinetobacter baumannii 1117819	1310780	PRJNA194856	194856	Proteobacteria	Gammaproteobacteria	3.93427	39	-	JFWW01	91	3900	3652	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415040	GCA_000588455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/455/GCA_000588455.1_ASM58845v1	-	1117819
Pseudomonas aeruginosa	287	PRJNA243996	243996	Proteobacteria	Gammaproteobacteria	6.31175	65.7	-	JMBR02	110	6206	5909	9/30/14	3/16/17	Contig	Center for Cellular and Molecular Biology(CCMB)	SAMN02720832	GCA_000760505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/505/GCA_000760505.2_ASM76050v2	25573941	P2-L230/95
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12082	51.7	-	FFBU01	93	2472	2155	2/9/16	3/19/17	Scaffold	SC	SAMEA2674321	GCA_900027995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/995/GCA_900027995.1_14555_5_90	-	2842STDY5881431
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63447	38.9	-	FLPS01	72	1614	1482	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3995858	GCA_900087945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/945/GCA_900087945.1_TC-3-2	-	-
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.05541	39.7	-	CMGM01	48	2258	2031	3/23/15	3/11/17	Contig	SC	SAMEA1029367	GCA_001103065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/065/GCA_001103065.1_7038_4_24	-	SMRU2952
Escherichia coli 8.0586	1005461	PRJNA65735	65735	Proteobacteria	Gammaproteobacteria	5.42047	50.3	-	AMTI01	483	5884	5421	10/10/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN01036881	GCA_000305375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/375/GCA_000305375.2_ASM30537v2	-	8.0586
Mycobacterium tuberculosis TKK_04_0136	1448594	PRJNA235599	235599	Terrabacteria group	Actinobacteria	4.39229	65.6	-	JJTU01	90	4328	4105	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586089	GCA_000656835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/835/GCA_000656835.1_Myco_tube_TKK_04_0136_V1	-	TKK_04_0136
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.94861	37.9	-	LNPQ01	18	3030	2932	2/9/16	3/1/17	Contig	FDA	SAMN03278638	GCA_001555605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/605/GCA_001555605.1_ASM155560v1	26950338	FDA00008715
Campylobacter jejuni CVM 41923	1440029	PRJNA232329	232329	Proteobacteria	delta/epsilon subdivisions	1.70194	30.4	-	JAKM01	71	1825	1701	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887138	GCA_001419105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/105/GCA_001419105.1_Campylobacter_jejuni_CVM_41923_v1.0	-	CVM 41923
Salmonella enterica subsp. enterica serovar Montevideo str. ATCC BAA710	749953	PRJNA46913	46913	Proteobacteria	Gammaproteobacteria	4.41939	52.5	-	AESS01	193	4495	4151	12/16/11	5/19/17	Contig	FDA	SAMN00754295	GCA_000238535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/535/GCA_000238535.2_ASM23853v2	22260654	ATCC BAA710
Staphylococcus aureus M0938	1388704	PRJNA216877	216877	Terrabacteria group	Firmicutes	2.92033	32.9	-	JAYF01	19	3083	2910	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325828	GCA_000532155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/155/GCA_000532155.1_Stap_aure_M0938_V1	-	M0938
Staphylococcus aureus M0950	1388713	PRJNA216886	216886	Terrabacteria group	Firmicutes	2.88618	32.9	-	JAYE01	13	3030	2870	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02325837	GCA_000532175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/175/GCA_000532175.1_Stap_aure_M0950_V1	-	M0950
Salmonella enterica subsp. enterica serovar Montevideo str. SARB31	749952	PRJNA46911	46911	Proteobacteria	Gammaproteobacteria	4.64827	52.3	-	AESR01	55	4701	4446	12/16/11	5/19/17	Contig	FDA	SAMN00754243	GCA_000238555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/238/555/GCA_000238555.2_ASM23855v2	22260654	SARB31
Campylobacter jejuni CVM 41927	1323653	PRJNA197355	197355	Proteobacteria	delta/epsilon subdivisions	1.67247	30.5	-	JAJG01	107	1773	1621	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887109	GCA_001419125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/125/GCA_001419125.1_Campylobacter_jejuni_CVM_41927_v1.0	-	CVM 41927
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.9586	37.9	-	LNPN01	19	3039	2943	2/9/16	3/1/17	Contig	FDA	SAMN03278635	GCA_001555655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/655/GCA_001555655.1_ASM155565v1	26950338	FDA00008712
Mycobacterium tuberculosis TKK_04_0137	1448595	PRJNA235600	235600	Terrabacteria group	Actinobacteria	4.40203	65.6	-	JJTT01	1	4281	4114	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586090	GCA_000656855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/855/GCA_000656855.1_Myco_tube_TKK_04_0137_V1	-	TKK_04_0137
Escherichia coli 8.2524	1005460	PRJNA65733	65733	Proteobacteria	Gammaproteobacteria	5.42903	50.3	-	AMTJ01	358	5864	5399	10/10/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN01036882	GCA_000305395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/395/GCA_000305395.2_ASM30539v2	-	8.2524
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.07659	39.6	-	CMDZ01	58	2273	2045	3/21/15	3/11/17	Contig	SC	SAMEA1028656	GCA_001103225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/225/GCA_001103225.1_7011_4_24	-	SMRU2784
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63174	38.9	-	FLPO01	69	1616	1485	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3995859	GCA_900087955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/955/GCA_900087955.1_TC-3-3	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12485	51.7	-	FFBY01	89	2494	2171	2/9/16	3/19/17	Scaffold	SC	SAMEA2674329	GCA_900028005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/005/GCA_900028005.1_14555_5_94	-	2842STDY5881435
Pseudomonas aeruginosa WS394	1341645	PRJEB3996	264216	Proteobacteria	Gammaproteobacteria	6.75436	66.1	-	CBYA01	198	6615	6321	10/18/14	3/16/17	Contig	CEBITEC	SAMEA3158454	GCA_000786485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/485/GCA_000786485.1_PAWS394	25523779	WS394
Acinetobacter baumannii 426863	1310778	PRJNA194854	194854	Proteobacteria	Gammaproteobacteria	3.89238	39.1	-	JFYF01	20	3704	3544	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415079	GCA_000588475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/475/GCA_000588475.1_ASM58847v1	-	426863
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.08444	35.3	-	MBKL01	38	2131	2034	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481627	GCA_001695055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/055/GCA_001695055.1_ASM169505v1	27411639	ES-PW-028
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04715	41.2	-	FIPJ01	20	2060	1958	2/10/16	3/19/17	Contig	SC	SAMEA1566206	GCA_900059195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/195/GCA_900059195.1_8525_5_21	-	SS15
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.7437	50.7	-	CXLI01	411	5300	4580	7/16/15	2/24/17	Scaffold	SC	SAMEA2164640	GCA_001258075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/075/GCA_001258075.1_8290_4_94	-	124558
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.06762	68.3	-	CSKY01	61	7280	6781	3/23/15	3/26/17	Scaffold	SC	SAMEA949315	GCA_001262355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/355/GCA_001262355.1_6998_1_13	-	ATCC 15682
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.99142	47.5	-	CWNP01	57	3751	3527	7/16/15	3/26/17	Scaffold	SC	SAMEA889233	GCA_001257975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/257/975/GCA_001257975.1_4056_2_11	-	A383
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.26426	29	-	FAFO01	1638	3859	3626	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664230	GCA_900012485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/485/GCA_900012485.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.1657	45.2	-	MITX01	109	4893	4736	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368308	GCA_001728345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/345/GCA_001728345.1_ASM172834v1	-	CDC_K5277
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA324148	324148	Proteobacteria	Gammaproteobacteria	5.74038	57.1	-	MUMU01	86	5910	5642	4/11/17	4/13/17	Scaffold	Geneva University Hospital	SAMN06293642	GCA_002086005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/005/GCA_002086005.1_ASM208600v1	28143787	KPN_KPC_HUG_B3
Enterococcus faecium	1352	PRJEB18432	356030	Terrabacteria group	Firmicutes	2.88584	38.3	-	FRDY01	170	2909	2698	12/8/16	4/10/17	Scaffold	RCPCM	SAMEA18407668	GCA_900143335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/335/GCA_900143335.1_Hp_5-10_05	-	-
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.78237	67.8	-	CFYD01	508	3728	3190	3/15/15	3/27/17	Scaffold	SC	SAMEA751493	GCA_001333615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/615/GCA_001333615.1_5515_6_8	-	B130
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.70118	31.3	-	FBKH01	30	1777	1679	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683334	GCA_001496615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/615/GCA_001496615.1_p635A	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18645	64.2	-	CSUP01	37	5191	5042	3/24/15	3/18/17	Scaffold	SC	SAMEA1464905	GCA_001213965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/965/GCA_001213965.1_7396_6_78	-	PAP030
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15999	64.1	-	CSVK01	23	5262	5085	3/24/15	3/18/17	Scaffold	SC	SAMEA1464930	GCA_001214005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/005/GCA_001214005.1_7396_7_11	-	PAP059
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.77972	31	-	FBIJ01	72	1842	1738	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683284	GCA_001496635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/635/GCA_001496635.1_UNOR532A	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.76676	67.7	-	CGFI01	580	3750	3133	3/15/15	3/27/17	Scaffold	SC	SAMEA751496	GCA_001333635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/635/GCA_001333635.1_5515_5_9	-	B118
Enterococcus faecium	1352	PRJEB18432	356030	Terrabacteria group	Firmicutes	2.9137	37.7	-	FRED01	269	3039	2742	12/8/16	4/10/17	Scaffold	RCPCM	SAMEA18417418	GCA_900143345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/345/GCA_900143345.1_Hp_24-3_05	-	-
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA324148	324148	Proteobacteria	Gammaproteobacteria	5.74147	57.1	-	MUMT01	94	5916	5638	4/11/17	4/13/17	Scaffold	Geneva University Hospital	SAMN06293615	GCA_002086025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/025/GCA_002086025.1_ASM208602v1	28143787	KPN_KPC_HUG_B2
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.16804	45.2	-	MIUK01	142	4934	4751	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN03358832	GCA_001728375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/375/GCA_001728375.1_ASM172837v1	-	CDC_K5330
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.20173	28.9	-	FAJZ01	1280	3800	3585	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664343	GCA_900012515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/515/GCA_900012515.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.03564	47.5	-	CWOQ01	98	3825	3639	7/16/15	3/26/17	Scaffold	SC	SAMEA889365	GCA_001258495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/495/GCA_001258495.1_2956_6_2	-	4656
Burkholderia pseudomallei	28450	PRJNA291304	291304	Proteobacteria	Betaproteobacteria	7.2408	67.8	-	LHQO01	269	7553	6816	8/19/15	4/10/17	Scaffold	The University of Queensland	SAMN03938520	GCA_001270725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/725/GCA_001270725.1_ASM127072v1	26430027	ST1381
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.7047	50.7	-	CWWO01	431	5286	4466	7/17/15	2/24/17	Scaffold	SC	SAMEA3345105	GCA_001258095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/095/GCA_001258095.1_Sg_201405358_CTCAGA_L001	-	201405358_1
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.06553	41.1	-	FIQM01	24	2070	1967	2/10/16	3/19/17	Contig	SC	SAMEA1566181	GCA_900059205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/205/GCA_900059205.1_8525_5_51	-	SS73
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.20075	35.4	-	MBLL01	50	2273	2161	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481628	GCA_001695075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/075/GCA_001695075.1_ASM169507v1	27411639	ES-PW-060
Acinetobacter baumannii 213697	1310763	PRJNA194839	194839	Proteobacteria	Gammaproteobacteria	4.09208	39.2	-	JFYE01	107	4063	3786	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415078	GCA_000588495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/495/GCA_000588495.1_ASM58849v1	-	213697
Pseudomonas aeruginosa	287	PRJNA260776	260776	Proteobacteria	Gammaproteobacteria	6.79955	66.2	-	JRGP01	165	6546	6282	11/24/14	3/16/17	Contig	University of Huddersfield	SAMN03031237	GCA_000786565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/565/GCA_000786565.1_ASM78656v1	26044421	PS3
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15919	51.6	-	FFCR01	90	2506	2164	2/9/16	3/19/17	Scaffold	SC	SAMEA2674176	GCA_900028015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/015/GCA_900028015.1_14555_6_19	-	2842STDY5881456
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.62949	38.9	-	FLPP01	76	1625	1480	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3995860	GCA_900087965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/965/GCA_900087965.1_TC-3-4	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05685	39.6	-	CNUH02	160	2219	2019	3/22/15	3/11/17	Contig	SC	SAMEA1032519	GCA_001103245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/245/GCA_001103245.2_6999_5_22	-	218186
Escherichia coli 10.0833	1005466	PRJNA65745	65745	Proteobacteria	Gammaproteobacteria	5.37395	50.3	-	AMTK01	415	5855	5373	10/10/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN01036885	GCA_000305415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/415/GCA_000305415.2_ASM30541v2	-	10.0833
Mycobacterium tuberculosis TKK_04_0139	1448596	PRJNA235601	235601	Terrabacteria group	Actinobacteria	4.42131	65.6	-	JJTS01	83	4352	4114	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586091	GCA_000656875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/875/GCA_000656875.1_Myco_tube_TKK_04_0139_V1	-	TKK_04_0139
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.90696	37.9	-	LNSM01	29	2933	2844	2/10/16	3/1/17	Contig	FDA	SAMN03253369	GCA_001557595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/595/GCA_001557595.1_ASM155759v1	26950338	PNUSAL001166
Campylobacter jejuni CVM 41933	1440028	PRJNA232330	232330	Proteobacteria	delta/epsilon subdivisions	1.72797	30.4	-	JAKN01	34	1820	1695	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887139	GCA_001419165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/165/GCA_001419165.1_Campylobacter_jejuni_CVM_41933_v1.0	-	CVM 41933
Salmonella enterica subsp. enterica serovar Montevideo str. 80959-06	763922	PRJNA48463	48463	Proteobacteria	Gammaproteobacteria	4.64653	52.2	-	AHHR01	50	4704	4466	12/30/11	5/19/17	Contig	FDA	SAMN00754301	GCA_000240785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/785/GCA_000240785.2_ASM24078v2	-	80959-06
Staphylococcus aureus M0962	1388723	PRJNA216896	216896	Terrabacteria group	Firmicutes	2.99306	33	-	JAYD01	25	3160	2973	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02325847	GCA_000532195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/195/GCA_000532195.1_Stap_aure_M0962_V1	-	M0962
Staphylococcus aureus M0973	1388733	PRJNA216906	216906	Terrabacteria group	Firmicutes	2.87791	32.9	-	JAYC01	18	3021	2862	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02325857	GCA_000532215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/215/GCA_000532215.1_Stap_aure_M0973_V1	-	M0973
Salmonella enterica subsp. enterica serovar Montevideo str. CT_02035318	984241	PRJNA62847	62847	Proteobacteria	Gammaproteobacteria	4.64985	52.2	-	AHHT01	50	4704	4476	12/30/11	5/19/17	Contig	FDA	SAMN00754303	GCA_000240825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/825/GCA_000240825.2_ASM24082v2	22260654	CT_02035318
Campylobacter jejuni CVM 41934	1440027	PRJNA232331	232331	Proteobacteria	delta/epsilon subdivisions	1.68139	30.6	-	JAKO01	223	1787	1610	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887140	GCA_001419185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/185/GCA_001419185.1_Campylobacter_jejuni_CVM_41934_v1.0	-	CVM 41934
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.90714	37.9	-	LNSO01	25	2936	2844	2/10/16	3/1/17	Contig	FDA	SAMN03093481	GCA_001557605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/605/GCA_001557605.1_ASM155760v1	26950338	PNUSAL001024
Mycobacterium tuberculosis TKK_04_0140	1448597	PRJNA235602	235602	Terrabacteria group	Actinobacteria	4.44401	65.6	-	JJTR01	72	4358	4133	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586092	GCA_000656895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/895/GCA_000656895.1_Myco_tube_TKK_04_0140_V1	-	TKK_04_0140
Escherichia coli 10.0869	1005467	PRJNA65747	65747	Proteobacteria	Gammaproteobacteria	5.2939	50.3	-	AMTL01	384	5694	5232	10/10/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN01036887	GCA_000305435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/435/GCA_000305435.2_ASM30543v2	-	10.0869
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12217	39.5	-	CLGT01	39	2347	2108	3/21/15	3/11/17	Contig	SC	SAMEA1026149	GCA_001103365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/365/GCA_001103365.1_6925_4_7	-	SMRU2143
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63383	38.9	-	FLPT01	67	1627	1492	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3995862	GCA_900087975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/975/GCA_900087975.1_TC-3-6	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16515	51.5	-	FFDA01	82	2501	2166	2/9/16	3/19/17	Scaffold	SC	SAMEA2674208	GCA_900028025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/025/GCA_900028025.1_14555_6_28	-	2842STDY5881465
Pseudomonas aeruginosa	287	PRJNA270281	270281	Proteobacteria	Gammaproteobacteria	6.4316	66.4	-	JWJU01	197	6186	5963	1/2/15	3/16/17	Contig	University of Malaya	SAMN03265389	GCA_000813565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/813/565/GCA_000813565.1_ASM81356v1	-	KY1
Acinetobacter baumannii 730795	1310803	PRJNA194879	194879	Proteobacteria	Gammaproteobacteria	4.05443	39	-	JFYB01	89	3997	3753	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415073	GCA_000588555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/555/GCA_000588555.1_ASM58855v1	-	730795
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.11473	35.4	-	MBLK01	42	2165	2050	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481629	GCA_001695095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/095/GCA_001695095.1_ASM169509v1	27411639	ES-PW-083
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05837	41.1	-	FITG01	24	2071	1961	2/10/16	3/19/17	Contig	SC	SAMEA1566136	GCA_900059215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/215/GCA_900059215.1_8525_5_13	-	FX501
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.6704	50.7	-	CXIU01	471	5253	4472	7/16/15	2/24/17	Scaffold	SC	SAMEA2004849	GCA_001258115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/115/GCA_001258115.1_8289_7_77	-	85720
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.06512	68.3	-	CGEW01	75	7331	6828	3/15/15	3/26/17	Scaffold	SC	SAMEA1483577	GCA_001320065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/065/GCA_001320065.1_7910_5_25	-	EY8
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.02739	47.6	-	CWRH01	99	3790	3457	7/16/15	3/26/17	Scaffold	SC	SAMEA889155	GCA_001258535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/535/GCA_001258535.1_4370_3_7	-	7686
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.25476	28.9	-	FAKS01	1767	3897	3610	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664360	GCA_900012525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/525/GCA_900012525.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.06749	45.3	-	MITY01	112	4830	4648	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368309	GCA_001728405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/405/GCA_001728405.1_ASM172840v1	-	CDC_K5278
Klebsiella pneumoniae	573	PRJNA324148	324148	Proteobacteria	Gammaproteobacteria	5.67498	57.1912	plasmid p4:NZ_CM007853.1/CM007853.1	MUMV01	113	5816	5563	4/11/17	4/17/17	Scaffold	Geneva University Hospital	SAMN06293693	GCA_002086055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/055/GCA_002086055.1_ASM208605v1	28143787	KPN_KPC_HUG_B4
Enterococcus faecium	1352	PRJEB18432	356030	Terrabacteria group	Firmicutes	2.82715	38.1	-	FREA01	221	3000	2657	12/8/16	3/28/17	Scaffold	RCPCM	SAMEA18412168	GCA_900143355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/355/GCA_900143355.1_Hp_21-21_05	-	-
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.7424	67.6	-	CGHS01	846	3775	3058	3/15/15	3/27/17	Scaffold	SC	SAMEA751498	GCA_001333655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/655/GCA_001333655.1_5515_5_11	-	B119
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.72429	31.2	-	FBHD01	22	1802	1715	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683251	GCA_001496655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/655/GCA_001496655.1_CCN246	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.85124	64.1	-	CSTR01	48	4880	4740	3/24/15	3/18/17	Scaffold	SC	SAMEA1464927	GCA_001214025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/025/GCA_001214025.1_7396_6_55	-	PAP007
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.85086	64.1	-	CSVO01	18	4818	4657	3/24/15	3/18/17	Scaffold	SC	SAMEA1464864	GCA_001214045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/045/GCA_001214045.1_7396_7_16	-	PAP064
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.77642	31.2	-	FBEG01	41	1873	1766	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683172	GCA_001496675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/675/GCA_001496675.1_SS_2315	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.79017	67.8	-	CGHR01	655	3800	3190	3/15/15	3/27/17	Scaffold	SC	SAMEA751500	GCA_001333695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/695/GCA_001333695.1_5476_7_5	-	B029
Enterococcus faecium	1352	PRJEB18432	356030	Terrabacteria group	Firmicutes	2.7935	38.1	-	FREH01	440	2866	2575	12/8/16	4/10/17	Scaffold	RCPCM	SAMEA18409168	GCA_900143375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/375/GCA_900143375.1_Hp_6-10_05	-	-
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA324148	324148	Proteobacteria	Gammaproteobacteria	5.63614	57.2	-	MUMW01	134	5801	5543	4/11/17	4/13/17	Scaffold	Geneva University Hospital	SAMN06293906	GCA_002086075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/075/GCA_002086075.1_ASM208607v1	28143787	KPN_KPC_HUG_B5
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.08798	45.3	-	MIUO01	126	4865	4682	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN03358833	GCA_001728415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/415/GCA_001728415.1_ASM172841v1	-	CDC_K5346
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.44309	29.7	-	FALE01	1888	4097	3799	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664368	GCA_900012535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/535/GCA_900012535.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.01265	47.5	-	CWRU01	56	3790	3647	7/16/15	3/26/17	Scaffold	SC	SAMEA889184	GCA_001258555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/555/GCA_001258555.1_5174_6_3	-	4488
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.09903	68.2	-	CFVP01	63	7327	6866	3/15/15	3/26/17	Scaffold	SC	SAMEA1483578	GCA_001320105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/105/GCA_001320105.1_7910_5_18	-	4094-0081
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.73737	50.7	-	CWZX01	378	5306	4569	7/16/15	2/24/17	Scaffold	SC	SAMEA2445764	GCA_001258155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/155/GCA_001258155.1_12971_8_72	-	H141020387
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.16132	41	-	FIFP01	68	2141	1969	2/10/16	3/19/17	Contig	SC	SAMEA1316512	GCA_900059415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/415/GCA_900059415.1_7114_5_12	-	LSS12
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.25769	35.3	-	MBLJ01	35	2346	2235	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481630	GCA_001695105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/105/GCA_001695105.1_ASM169510v1	27411639	ES-PW-101
Acinetobacter baumannii 1428368	1310797	PRJNA194873	194873	Proteobacteria	Gammaproteobacteria	4.09224	39.2	-	JFXM02	80	3962	3688	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415059	GCA_000588575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/575/GCA_000588575.2_ASM58857v2	-	1428368
Pseudomonas aeruginosa WS136	1341644	PRJEB3995	266941	Proteobacteria	Gammaproteobacteria	6.49309	66.4	-	CBXZ01	70	6215	6052	1/14/15	3/16/17	Contig	CEBITEC	SAMEA3158505	GCA_000820805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/805/GCA_000820805.1_PAWS136	-	WS136
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.21574	51.6	-	FFDB01	102	2574	2157	2/9/16	3/21/17	Scaffold	SC	SAMEA2674211	GCA_900028035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/035/GCA_900028035.1_14555_6_29	-	2842STDY5881466
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63218	38.9	-	FLPR01	58	1617	1477	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3995861	GCA_900087995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/995/GCA_900087995.1_TC-3-5	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06378	39.6	-	CNUO02	165	2258	2054	3/23/15	3/5/17	Contig	SC	SAMEA1032438	GCA_001103445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/445/GCA_001103445.2_6999_6_14	-	291880
Escherichia coli 88.0221	1005397	PRJNA65591	65591	Proteobacteria	Gammaproteobacteria	5.12588	50.4	-	AMTM01	363	5519	5085	10/10/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN01036884	GCA_000305455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/305/455/GCA_000305455.2_ASM30545v2	-	88.0221
Mycobacterium tuberculosis TKK_04_0145	1448599	PRJNA235604	235604	Terrabacteria group	Actinobacteria	4.41909	65.6	-	JJTP01	54	4325	4114	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586094	GCA_000656915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/915/GCA_000656915.1_Myco_tube_TKK_04_0145_V1	-	TKK_04_0145
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.90774	37.9	-	LNSN01	26	2938	2848	2/10/16	3/1/17	Contig	FDA	SAMN02854695	GCA_001557615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/615/GCA_001557615.1_ASM155761v1	26950338	PNUSAL000730
Campylobacter jejuni CVM 41936	1440060	PRJNA232332	232332	Proteobacteria	delta/epsilon subdivisions	1.70274	30.4	-	JAKP01	56	1800	1671	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887141	GCA_001419195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/195/GCA_001419195.1_Campylobacter_jejuni_CVM_41936_v1.0	-	CVM 41936
Salmonella enterica subsp. enterica serovar Montevideo str. CT_02035320	984242	PRJNA62849	62849	Proteobacteria	Gammaproteobacteria	4.65109	52.2	-	AHHU01	41	4706	4461	12/30/11	5/19/17	Contig	FDA	SAMN00754304	GCA_000240845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/845/GCA_000240845.2_ASM24084v2	22260654	CT_02035320
Staphylococcus aureus M0977	1402603	PRJNA219953	219953	Terrabacteria group	Firmicutes	2.93373	33	-	JAYB01	21	3104	2938	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02360760	GCA_000532235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/235/GCA_000532235.1_Stap_aure_M0977_V1	-	M0977
Staphylococcus aureus M0986	1402604	PRJNA219954	219954	Terrabacteria group	Firmicutes	2.92989	33.1	-	JAYA01	19	3058	2887	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02360761	GCA_000532255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/255/GCA_000532255.1_Stap_aure_M0986_V1	-	M0986
Salmonella enterica subsp. enterica serovar Montevideo str. CT_02035321	882860	PRJNA51967	51967	Proteobacteria	Gammaproteobacteria	4.65219	52.2	-	AHHV01	40	4717	4470	12/30/11	5/19/17	Contig	FDA	SAMN00754305	GCA_000240865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/865/GCA_000240865.2_ASM24086v2	22260654	CT_02035321
Campylobacter jejuni CVM 41943	1440061	PRJNA232333	232333	Proteobacteria	delta/epsilon subdivisions	1.65835	30.4	-	JAKQ01	40	1736	1616	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887142	GCA_001419245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/245/GCA_001419245.1_Campylobacter_jejuni_CVM_41943_v1.0	-	CVM 41943
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.9471	37.9	-	LNSL01	30	3002	2927	2/10/16	3/1/17	Contig	FDA	SAMN03253360	GCA_001557625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/625/GCA_001557625.1_ASM155762v1	26950338	PNUSAL001157
Mycobacterium tuberculosis TKK_04_0148	1448600	PRJNA235605	235605	Terrabacteria group	Actinobacteria	4.41981	65.6	-	JJTO01	77	4343	4115	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586095	GCA_000656935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/935/GCA_000656935.1_Myco_tube_TKK_04_0148_V1	-	TKK_04_0148
Escherichia coli chi7122	475609	PRJEB50	171231	Proteobacteria	Gammaproteobacteria	4.7717	50.6	-	CAJR01	1	4945	4589	8/1/12	2/22/17	Scaffold	WTSI	SAMEA2272189	GCA_000307205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/205/GCA_000307205.1_ASM30720v1	-	chi7122
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.0708	39.6	-	CLRK01	32	2262	2021	3/21/15	3/15/17	Contig	SC	SAMEA1029044	GCA_001103525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/525/GCA_001103525.1_6972_2_24	-	SMRU2568
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.6317	38.9	-	FLPE01	52	1616	1485	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3995845	GCA_900088005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/005/GCA_900088005.1_TC-2-1-3	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16693	51.6	-	FFDD01	75	2507	2158	2/9/16	3/19/17	Scaffold	SC	SAMEA2674215	GCA_900028045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/045/GCA_900028045.1_14555_6_31	-	2842STDY5881468
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.45756	66.5	-	CCPL01	57	6176	6006	9/6/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2732146	GCA_000823905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/905/GCA_000823905.1_LES_CF_sputum_CF03_contigs_8_a1	-	Liverpool Epidemic Strain
Acinetobacter baumannii 1170863	1310782	PRJNA194858	194858	Proteobacteria	Gammaproteobacteria	4.0855	39	-	JFWT01	59	4008	3784	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415042	GCA_000588615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/615/GCA_000588615.1_ASM58861v1	-	1170863
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.06577	35.4	-	MBLI01	45	2101	1996	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481631	GCA_001695135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/135/GCA_001695135.1_ASM169513v1	27411639	ES-PW-130
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.13684	41.1	-	FIFQ01	52	2119	1964	2/10/16	3/19/17	Contig	SC	SAMEA1316604	GCA_900059425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/425/GCA_900059425.1_7114_5_13	-	LSS13
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.65763	50.8	-	CXDZ01	407	4981	4509	7/17/15	2/24/17	Scaffold	SC	SAMEA954600	GCA_001258175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/175/GCA_001258175.1_5417_1_10	-	20061758_1361376
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.14011	68.2	-	CHKS01	75	7389	6889	4/21/15	3/27/17	Scaffold	SC	SAMEA1483579	GCA_001320145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/145/GCA_001320145.1_7910_5_12	-	115
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.04525	47.4	-	CWRX01	50	3837	3681	7/16/15	3/26/17	Scaffold	SC	SAMEA889183	GCA_001258995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/995/GCA_001258995.1_5174_6_6	-	4646
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.17127	28.9	-	CZXS01	1142	3784	3583	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664023	GCA_900012705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/705/GCA_900012705.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.06726	45.3	-	MIUL01	95	4827	4673	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368321	GCA_001728425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/425/GCA_001728425.1_ASM172842v1	-	CDC_K5331
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA324148	324148	Proteobacteria	Gammaproteobacteria	5.68259	57.2	-	MUMX01	128	5842	5583	4/11/17	4/13/17	Scaffold	Geneva University Hospital	SAMN06294062	GCA_002086095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/095/GCA_002086095.1_ASM208609v1	28143787	KPN_KPC_HUG_B6
Enterococcus faecium	1352	PRJEB18432	356030	Terrabacteria group	Firmicutes	2.92187	38.2	-	FREC01	234	3027	2756	12/8/16	3/28/17	Scaffold	RCPCM	SAMEA18410668	GCA_900143385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/385/GCA_900143385.1_Hp_7-8_05	-	-
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.70934	67.5	-	CGFQ01	1298	3779	2931	3/15/15	3/27/17	Scaffold	SC	SAMEA751505	GCA_001333755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/755/GCA_001333755.1_5633_3_2	-	B164
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66053	31.4	-	FBCZ01	24	1721	1626	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683140	GCA_001496695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/695/GCA_001496695.1_EC3705	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.84931	64.1	-	CSVP01	17	4818	4666	3/24/15	3/18/17	Scaffold	SC	SAMEA1464845	GCA_001214065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/065/GCA_001214065.1_7396_7_15	-	PAP063
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18545	64.2	-	CSVF01	39	5187	5037	3/24/15	3/18/17	Scaffold	SC	SAMEA1464953	GCA_001214085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/085/GCA_001214085.1_7396_6_94	-	PAP046
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.7886	31.2	-	FBHH01	65	1825	1711	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683255	GCA_001496715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/715/GCA_001496715.1_SWAN261	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.78048	67.8	-	CFZP01	564	3756	3160	3/15/15	3/27/17	Scaffold	SC	SAMEA751510	GCA_001333775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/775/GCA_001333775.1_5476_6_8	-	B032
Enterococcus faecium	1352	PRJEB18432	356030	Terrabacteria group	Firmicutes	2.98613	38.2	-	FREM01	945	2923	2653	12/8/16	4/10/17	Scaffold	RCPCM	SAMEA18408418	GCA_900143395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/395/GCA_900143395.1_Hp_6-9_05	-	-
Klebsiella pneumoniae	573	PRJNA381140	381140	Proteobacteria	Gammaproteobacteria	5.4749	57.2	-	NBOS01	70	5530	5248	4/18/17	4/21/17	Scaffold	Fiocruz	SAMN06670861	GCA_002099165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/165/GCA_002099165.1_ASM209916v1	-	CCBH24080
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.14849	45.3	-	MIUM01	112	4923	4750	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368322	GCA_001728465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/465/GCA_001728465.1_ASM172846v1	-	CDC_K5345G
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.50865	28.8	-	FABM01	383	4230	4083	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664127	GCA_900012715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/715/GCA_900012715.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.92554	47.5	-	CWRQ01	39	3720	3581	7/16/15	3/26/17	Scaffold	SC	SAMEA889303	GCA_001259055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/055/GCA_001259055.1_5174_5_9	-	4113
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.11531	68.2	-	CGHA01	62	7336	6830	3/15/15	3/26/17	Scaffold	SC	SAMEA1483580	GCA_001320185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/185/GCA_001320185.1_7910_5_26	-	4
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.72876	50.8	-	CWVH01	390	5277	4532	7/16/15	2/24/17	Scaffold	SC	SAMEA3345073	GCA_001258215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/215/GCA_001258215.1_Sg_201400633_TTAGGC_L001	-	201400633_1
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	1.98523	41.3	-	FIJN01	29	2000	1904	2/10/16	3/19/17	Contig	SC	SAMEA1316563	GCA_900059435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/435/GCA_900059435.1_7054_7_29	-	SS1024
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.09482	35.4	-	MBLH01	42	2138	2027	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481632	GCA_001695155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/155/GCA_001695155.1_ASM169515v1	27411639	ES-PW-135
Acinetobacter baumannii 1237202	1310767	PRJNA194843	194843	Proteobacteria	Gammaproteobacteria	4.19166	39.2	-	JFWU01	110	4185	3895	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415045	GCA_000588635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/635/GCA_000588635.1_ASM58863v1	-	1237202
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.46144	66.5	-	CCPN01	71	6178	6002	9/6/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2732147	GCA_000823925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/925/GCA_000823925.1_LES_CF_sputum_CF03_contigs_9_a1	-	Liverpool Epidemic Strain
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.14755	51.5	-	FFDH01	91	2495	2128	2/9/16	3/21/17	Scaffold	SC	SAMEA2674223	GCA_900028055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/055/GCA_900028055.1_14555_6_35	-	2842STDY5881472
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.6327	38.9	-	FLPF01	62	1622	1489	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3995843	GCA_900088015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/015/GCA_900088015.1_TC-2-1-1	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.00442	39.6	-	CRUN01	54	2203	2010	3/23/15	3/4/17	Contig	SC	SAMEA1025269	GCA_001103605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/605/GCA_001103605.1_6805_5_8	-	SMRU1688
Escherichia coli 88.1467	1005396	PRJNA65589	65589	Proteobacteria	Gammaproteobacteria	5.36313	50.3	-	ANLH01	486	5796	5344	12/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN01041331	GCA_000316325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/325/GCA_000316325.2_ASM31632v2	-	88.1467
Mycobacterium tuberculosis TKK_04_0149	1448601	PRJNA235606	235606	Terrabacteria group	Actinobacteria	4.39274	65.6	-	JJTN01	79	4319	4119	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586096	GCA_000656955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/955/GCA_000656955.1_Myco_tube_TKK_04_0149_V1	-	TKK_04_0149
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.90844	37.9	-	LNSQ01	29	2932	2843	2/10/16	3/1/17	Contig	FDA	SAMN03013698	GCA_001557675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/675/GCA_001557675.1_ASM155767v1	26950338	PNUSAL000957
Campylobacter jejuni CVM 41946	1323650	PRJNA197349	197349	Proteobacteria	delta/epsilon subdivisions	1.71345	30.5	-	JAJE01	105	1817	1678	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887107	GCA_001419295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/295/GCA_001419295.1_Campylobacter_jejuni_CVM_41946_v1.0	-	CVM 41946
Salmonella enterica subsp. enterica serovar Montevideo str. CT_02035327	882862	PRJNA51973	51973	Proteobacteria	Gammaproteobacteria	4.65004	52.2	-	AHHW01	57	4718	4468	12/30/11	5/19/17	Contig	FDA	SAMN00754306	GCA_000240885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/885/GCA_000240885.2_ASM24088v2	22260654	CT_02035327
Staphylococcus aureus M1001	1402605	PRJNA219955	219955	Terrabacteria group	Firmicutes	2.88753	32.9	-	JAXZ01	13	3030	2870	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02360762	GCA_000532275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/275/GCA_000532275.1_Stap_aure_M1001_V1	-	M1001
Staphylococcus aureus M1020	1402606	PRJNA219956	219956	Terrabacteria group	Firmicutes	2.91692	33	-	JAXY01	26	3066	2897	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02360763	GCA_000532295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/295/GCA_000532295.1_Stap_aure_M1020_V1	-	M1020
Salmonella enterica subsp. enterica serovar Pomona str. ATCC 10729	941188	PRJNA61431	61431	Proteobacteria	Gammaproteobacteria	4.63313	52.2	-	AHIA01	94	4741	4473	12/30/11	5/19/17	Contig	FDA	SAMN00754430	GCA_000240905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/905/GCA_000240905.2_ASM24090v2	22260654	ATCC 10729
Campylobacter jejuni CVM 41973	1323651	PRJNA197353	197353	Proteobacteria	delta/epsilon subdivisions	1.71669	30.5	-	JAJF01	91	1816	1673	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887108	GCA_001419475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/475/GCA_001419475.1_Campylobacter_jejuni_CVM_41973_v1.0	-	CVM 41973
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.91077	37.9	-	LNSR01	16	2944	2851	2/10/16	3/1/17	Contig	FDA	SAMN03278639	GCA_001557685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/685/GCA_001557685.1_ASM155768v1	26950338	FDA00008716
Mycobacterium tuberculosis TKK_04_0150	1448602	PRJNA235607	235607	Terrabacteria group	Actinobacteria	4.44362	65.6	-	JJTM01	64	4333	4133	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586097	GCA_000656975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/975/GCA_000656975.1_Myco_tube_TKK_04_0150_V1	-	TKK_04_0150
Escherichia coli 88.1042	1005398	PRJNA65593	65593	Proteobacteria	Gammaproteobacteria	5.25055	50.3	-	ANLI01	400	5585	5190	12/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN01041330	GCA_000316345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/345/GCA_000316345.2_ASM31634v2	-	88.1042
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.15502	39.5	-	CMGU01	49	2394	2153	3/22/15	3/4/17	Contig	SC	SAMEA1029301	GCA_001103725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/725/GCA_001103725.1_7038_5_1	-	SMRU2953
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.62969	38.9	-	FLPC01	66	1613	1479	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3995846	GCA_900088025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/025/GCA_900088025.1_TC-2-1-4	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15826	51.5	-	FFDI01	96	2514	2139	2/9/16	3/21/17	Scaffold	SC	SAMEA2674225	GCA_900028065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/065/GCA_900028065.1_14555_6_36	-	2842STDY5881473
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.46155	66.5	-	CCPM01	75	6184	6008	9/5/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2732148	GCA_000823945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/945/GCA_000823945.1_LES_CF_sputum_CF03_contigs_10_a1	-	Liverpool Epidemic Strain
Acinetobacter baumannii 11126	1310802	PRJNA194878	194878	Proteobacteria	Gammaproteobacteria	4.06309	39.1	-	JFWS01	91	4000	3747	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415039	GCA_000588655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/655/GCA_000588655.1_ASM58865v1	-	11126
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.13957	35.4	-	MBLG01	40	2212	2090	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481633	GCA_001695175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/175/GCA_001695175.1_ASM169517v1	27411639	ES-PW-185
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.05111	41.1	-	FIKC01	27	2048	1941	2/10/16	3/19/17	Contig	SC	SAMEA1316541	GCA_900059445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/445/GCA_900059445.1_7054_7_38	-	SS1036
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.50551	50.6	-	CWTB01	388	5131	4270	7/17/15	2/24/17	Scaffold	SC	SAMEA3345037	GCA_001258235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/235/GCA_001258235.1_H14072036401	-	36401ss_1
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	6.98463	68.2	-	CGEV01	79	7245	6755	3/15/15	3/26/17	Scaffold	SC	SAMEA1483582	GCA_001320215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/215/GCA_001320215.1_7910_5_27	-	6
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.01897	47.5	-	CWON01	92	3807	3628	7/16/15	3/26/17	Scaffold	SC	SAMEA889371	GCA_001259135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/135/GCA_001259135.1_2956_6_1	-	4605
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.52689	28.9	-	FABN01	1346	4221	3999	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664128	GCA_900012725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/725/GCA_900012725.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.12554	45.3	-	MIUN01	105	4878	4716	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368323	GCA_001728485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/485/GCA_001728485.1_ASM172848v1	-	CDC_K5345W
Klebsiella pneumoniae	573	PRJNA326419	326419	Proteobacteria	Gammaproteobacteria	5.37383	57.2553	plasmid pKp314/11a:NZ_KX276209.1/KX276209.1	MAOP01	374	5689	5118	4/21/17	5/26/17	Scaffold	Adolfo Lutz Institute	SAMN05277829	GCA_002105205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/205/GCA_002105205.2_ASM210520v2	-	314
Enterococcus faecium	1352	PRJEB18432	356030	Terrabacteria group	Firmicutes	2.72773	38.2	-	FREE01	307	2872	2545	12/8/16	4/10/17	Scaffold	RCPCM	SAMEA18415918	GCA_900143405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/405/GCA_900143405.1_Hp_23-14_05	-	-
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.82934	67.9	-	CHFQ01	305	3691	3297	4/21/15	3/27/17	Scaffold	SC	SAMEA751512	GCA_001333795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/795/GCA_001333795.1_5476_6_6	-	B017
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.76059	31.2	-	FBNS01	31	1855	1760	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683423	GCA_001496735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/735/GCA_001496735.1_H072820536	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.84882	64.1	-	CSVQ01	14	4814	4659	3/24/15	3/18/17	Scaffold	SC	SAMEA1464943	GCA_001214105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/105/GCA_001214105.1_7396_7_17	-	PAP065
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.8396	64.2	-	CSUL01	43	4866	4727	3/24/15	3/18/17	Scaffold	SC	SAMEA1464840	GCA_001214125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/125/GCA_001214125.1_7396_6_74	-	PAP026
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66337	31.4	-	FBFL01	19	1716	1627	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683203	GCA_001496775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/775/GCA_001496775.1_EC5072	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.81318	67.9	-	CIKA01	497	3761	3242	4/21/15	3/27/17	Scaffold	SC	SAMEA751513	GCA_001333815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/815/GCA_001333815.1_5476_6_7	-	B016
Enterococcus faecium	1352	PRJEB18432	356030	Terrabacteria group	Firmicutes	2.93714	38.2	-	FREJ01	657	2970	2644	12/8/16	3/28/17	Scaffold	RCPCM	SAMEA18421168	GCA_900143425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/425/GCA_900143425.1_Hp_76-7_05	-	-
Klebsiella pneumoniae	573	PRJNA381148	381148	Proteobacteria	Gammaproteobacteria	5.66227	56.8	-	NBOK01	89	5797	5489	4/24/17	4/26/17	Scaffold	St. Luke's Medical Center	SAMN06670983	GCA_002108235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/235/GCA_002108235.1_ASM210823v1	-	ARPG-340
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.03154	45.3	-	MIUV01	106	4794	4628	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368330	GCA_001728495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/495/GCA_001728495.1_ASM172849v1	-	CDC_K5439
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.34298	28.4	-	FADF01	470	4063	3939	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664168	GCA_900012735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/735/GCA_900012735.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.03313	47.5	-	CWRT01	52	3819	3668	7/16/15	3/26/17	Scaffold	SC	SAMEA889179	GCA_001259235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/235/GCA_001259235.1_5174_6_2	-	4552
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.04242	68.3	-	CFWB01	72	7276	6777	3/15/15	3/26/17	Scaffold	SC	SAMEA1483583	GCA_001320255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/255/GCA_001320255.1_7910_5_10	-	JAM
Shigella sonnei	624	PRJEB2460	204320	Proteobacteria	Gammaproteobacteria	4.57025	50.9	-	CXFL01	377	4968	4405	7/16/15	2/24/17	Scaffold	SC	SAMEA1027703	GCA_001258255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/255/GCA_001258255.1_6350_1_14	-	sh96-1420
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.21335	41	-	FIKF01	32	2241	2075	2/10/16	3/19/17	Contig	SC	SAMEA1316642	GCA_900059455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/455/GCA_900059455.1_7054_7_88	-	SS1037
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.03083	35.2	-	MBLF01	35	2078	1984	7/26/16	3/20/17	Contig	Novartis Vaccines	SAMN04481634	GCA_001695185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/185/GCA_001695185.1_ASM169518v1	27411639	GB-PW-024
Acinetobacter baumannii 1007214	1310784	PRJNA194860	194860	Proteobacteria	Gammaproteobacteria	3.95009	38.9	-	JFWQ01	46	3913	3677	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415037	GCA_000588675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/675/GCA_000588675.1_ASM58867v1	-	1007214
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.4857	66.4	-	CCOF01	58	6194	6025	9/5/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2732149	GCA_000823965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/965/GCA_000823965.1_LES_CF_sputum_CF03_contigs_11_a1	-	Liverpool Epidemic Strain
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.09688	51.8	-	FFDQ01	81	2402	2069	2/9/16	3/21/17	Scaffold	SC	SAMEA2674241	GCA_900028075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/075/GCA_900028075.1_14555_6_44	-	2842STDY5881481
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63035	38.9	-	FLPI01	59	1617	1478	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3995851	GCA_900088035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/035/GCA_900088035.1_TC-2-2-3	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.1048	39.5	-	COBD02	122	2288	2073	3/23/15	3/11/17	Contig	SC	SAMEA1463286	GCA_001103765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/765/GCA_001103765.2_7622_2_36	-	BR1106
Escherichia coli 89.0511	1005399	PRJNA65595	65595	Proteobacteria	Gammaproteobacteria	5.30124	50.3	-	ANLJ01	427	5697	5255	12/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN01041328	GCA_000316365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/365/GCA_000316365.2_ASM31636v2	-	89.0511
Mycobacterium tuberculosis TKK_04_0153	1448604	PRJNA235609	235609	Terrabacteria group	Actinobacteria	4.36305	65.6	-	JJTL01	81	4294	4092	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586099	GCA_000656995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/656/995/GCA_000656995.1_Myco_tube_TKK_04_0153_V1	-	TKK_04_0153
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.90791	37.9	-	LNSP01	25	2939	2844	2/10/16	3/1/17	Contig	FDA	SAMN02950476	GCA_001557705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/557/705/GCA_001557705.1_ASM155770v1	26950338	PNUSAL000870
Campylobacter jejuni CVM 41964	1440062	PRJNA232335	232335	Proteobacteria	delta/epsilon subdivisions	1.72028	30.4	-	JAKR01	102	1822	1674	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887143	GCA_001419625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/625/GCA_001419625.1_Campylobacter_jejuni_CVM_41964_v1.0	-	CVM 41964
Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008286	882868	PRJNA51987	51987	Proteobacteria	Gammaproteobacteria	4.65299	52.2	-	AHIK01	38	4724	4469	1/13/12	5/19/17	Contig	FDA	SAMN00754308	GCA_000242795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/795/GCA_000242795.2_ASM24279v2	-	IA_2010008286
Staphylococcus aureus M1042	1402607	PRJNA219957	219957	Terrabacteria group	Firmicutes	2.91372	32.9	-	JAXX01	25	3041	2866	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02360764	GCA_000532315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/315/GCA_000532315.1_Stap_aure_M1042_V1	-	M1042
Staphylococcus aureus M1052	1402608	PRJNA219958	219958	Terrabacteria group	Firmicutes	2.93174	32.9	-	JAXW01	22	3077	2915	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02360765	GCA_000532335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/335/GCA_000532335.1_Stap_aure_M1052_V1	-	M1052
Salmonella enterica subsp. enterica serovar Typhi str. BL196	1156917	PRJNA85621	85621	Proteobacteria	Gammaproteobacteria	4.68992	52.1	-	AJGK01	191	4958	4507	3/26/12	5/19/17	Contig	University of Hyderabad	SAMN02415287	GCA_000256015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/015/GCA_000256015.1_SalTypBL196_1.0	22689247	BL196
Campylobacter jejuni CVM 41985	1440042	PRJNA232338	232338	Proteobacteria	delta/epsilon subdivisions	1.69128	30.5	-	JAKU01	88	1778	1638	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887146	GCA_001419635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/635/GCA_001419635.1_Campylobacter_jejuni_CVM_41985_v1.0	-	CVM 41985
Listeria monocytogenes	1639	PRJNA309241	309241	Terrabacteria group	Firmicutes	3.03615	38	-	LROO01	60	3129	3037	2/17/16	3/1/17	Contig	National Institute for Communicable Diseases	SAMN04429784	GCA_001562515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/515/GCA_001562515.1_ASM156251v1	27056221	TCD918855
Mycobacterium tuberculosis TKK_04_0155	1448605	PRJNA235610	235610	Terrabacteria group	Actinobacteria	4.41849	65.6	-	JJTK01	92	4322	4126	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586100	GCA_000657015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/015/GCA_000657015.1_Myco_tube_TKK_04_0155_V1	-	TKK_04_0155
Escherichia coli 90.0091	1005400	PRJNA65597	65597	Proteobacteria	Gammaproteobacteria	5.4395	50.3	-	ANLK01	522	5938	5434	12/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN01041332	GCA_000316385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/385/GCA_000316385.2_ASM31638v2	-	90.0091
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.06755	39.6	-	CRSH01	54	2243	2033	3/23/15	3/4/17	Contig	SC	SAMEA1025523	GCA_001103785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/785/GCA_001103785.1_6805_2_5	-	SMRU1421
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63758	38.9	-	FLPM01	74	1625	1488	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3995854	GCA_900088045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/045/GCA_900088045.1_TC-2-2-6	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12992	51.6	-	FFDS01	67	2485	2110	2/9/16	3/21/17	Scaffold	SC	SAMEA2674245	GCA_900028085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/085/GCA_900028085.1_14555_6_46	-	2842STDY5881483
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.47675	66.5	-	CCOH01	60	6198	6029	9/5/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2732150	GCA_000823985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/985/GCA_000823985.1_LES_CF_sputum_CF03_contigs_13_a1	-	Liverpool Epidemic Strain
Acinetobacter baumannii 1262761-97	1310777	PRJNA194853	194853	Proteobacteria	Gammaproteobacteria	4.0027	39	-	JFWV01	96	3963	3698	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415046	GCA_000588695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/695/GCA_000588695.1_ASM58869v1	-	1262761-97
Streptococcus agalactiae	1311	PRJNA342556	342556	Terrabacteria group	Firmicutes	2.13455	35.2	-	MJHP01	22	2193	2071	10/28/16	3/20/17	Contig	MIT	SAMN05762126	GCA_001856375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/375/GCA_001856375.1_ASM185637v1	-	195-16-B-RAT
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.0512	41.2	-	FIMQ01	31	2051	1942	2/10/16	3/19/17	Contig	SC	SAMEA1566093	GCA_900059465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/465/GCA_900059465.1_8337_6_13	-	BM231a
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.62505	50.8	-	CXHQ01	379	5218	4440	7/16/15	2/24/17	Scaffold	SC	SAMEA2003848	GCA_001258275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/275/GCA_001258275.1_8289_7_46	-	75686
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.12303	68.2	-	CFVI01	66	7357	6881	3/15/15	3/26/17	Scaffold	SC	SAMEA1483585	GCA_001320285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/285/GCA_001320285.1_7910_5_32	-	20
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.03916	47.6	-	CWOL01	89	3773	3247	7/16/15	3/26/17	Scaffold	SC	SAMEA889348	GCA_001259315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/315/GCA_001259315.1_4056_6_6	-	A131
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.14626	29.1	-	FADJ01	1529	3788	3529	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664170	GCA_900012745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/745/GCA_900012745.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.07502	45.3	-	MIUX01	97	4834	4656	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368332	GCA_001728505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/505/GCA_001728505.1_ASM172850v1	-	CDC_K5457
Klebsiella pneumoniae	573	PRJNA381148	381148	Proteobacteria	Gammaproteobacteria	5.70498	56.6	-	NBOL01	181	5824	5507	4/24/17	4/26/17	Scaffold	St. Luke's Medical Center	SAMN06670984	GCA_002108245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/245/GCA_002108245.1_ASM210824v1	-	ARPG-372
Enterococcus faecium	1352	PRJEB18432	356030	Terrabacteria group	Firmicutes	2.98342	38.3	-	FREI01	540	2982	2728	12/8/16	3/28/17	Scaffold	RCPCM	SAMEA18409918	GCA_900143435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/435/GCA_900143435.1_Hp_7-6_05	-	-
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.77852	67.8	-	CGHF01	652	3774	3182	3/15/15	3/27/17	Scaffold	SC	SAMEA751515	GCA_001333835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/835/GCA_001333835.1_5476_6_5	-	B030
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68827	31.3	-	FBLE01	33	1748	1655	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683356	GCA_001496795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/795/GCA_001496795.1_H114640463a	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96646	64.3	-	CSVW01	74	4962	4741	3/24/15	3/18/17	Scaffold	SC	SAMEA1464957	GCA_001214145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/145/GCA_001214145.1_7396_7_22	-	PAP070
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.14917	64.1	-	CSVJ01	33	5262	5070	3/24/15	3/18/17	Scaffold	SC	SAMEA1464916	GCA_001214165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/165/GCA_001214165.1_7396_7_1	-	PAP049
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66096	31.4	-	FBAC01	23	1727	1629	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683069	GCA_001496815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/815/GCA_001496815.1_EC3326	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.72624	67.7	-	CFXQ01	1163	3792	2995	3/15/15	3/27/17	Scaffold	SC	SAMEA751516	GCA_001333855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/855/GCA_001333855.1_5633_2_2	-	B007
Enterococcus faecium	1352	PRJEB18432	356030	Terrabacteria group	Firmicutes	3.32434	38	-	FREN01	1175	3245	2801	12/8/16	3/28/17	Scaffold	RCPCM	SAMEA18406918	GCA_900143445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/445/GCA_900143445.1_Hp_5-7_05	-	-
Klebsiella pneumoniae	573	PRJNA381148	381148	Proteobacteria	Gammaproteobacteria	5.39583	57.3	-	NBOJ01	53	5411	5146	4/24/17	4/26/17	Scaffold	St. Luke's Medical Center	SAMN06670982	GCA_002108275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/275/GCA_002108275.1_ASM210827v1	-	ARPG-318
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.08081	45.3	-	MIUW01	114	4834	4667	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368331	GCA_001728545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/545/GCA_001728545.1_ASM172854v1	-	CDC_K5456
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	3.97192	28.6	-	FADI01	310	3718	3591	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664171	GCA_900012755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/755/GCA_900012755.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.03561	47.5	-	CWQO01	40	3830	3680	7/16/15	3/26/17	Scaffold	SC	SAMEA889396	GCA_001259475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/475/GCA_001259475.1_4370_2_2	-	6210
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.21202	68.1	-	CGFD01	70	7421	6921	3/15/15	3/26/17	Scaffold	SC	SAMEA1483588	GCA_001320325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/325/GCA_001320325.1_7910_5_16	-	AH4
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.76804	50.7	-	CWVX01	379	5319	4572	7/16/15	2/24/17	Scaffold	SC	SAMEA3345091	GCA_001258335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/335/GCA_001258335.1_Sg_201402425_ATGAGC_L001	-	201402425_1
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.07061	41	-	FIMR01	59	2080	1951	2/10/16	3/19/17	Contig	SC	SAMEA1566084	GCA_900059475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/475/GCA_900059475.1_8337_6_16	-	BM251C
Streptococcus agalactiae	1311	PRJNA342556	342556	Terrabacteria group	Firmicutes	2.06019	35.1	-	MJHQ01	41	2110	2003	10/28/16	3/20/17	Contig	MIT	SAMN05762127	GCA_001856395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/395/GCA_001856395.1_ASM185639v1	-	196-16-B-RAT
Acinetobacter baumannii 1000160	1310800	PRJNA194876	194876	Proteobacteria	Gammaproteobacteria	3.98476	42.9	-	JFWP02	35	3817	3613	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415036	GCA_000588715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/715/GCA_000588715.2_ASM58871v2	-	1000160
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.48494	66.4	-	CCOI01	63	6194	6028	9/5/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2732151	GCA_000824005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/005/GCA_000824005.1_LES_CF_sputum_CF03_contigs_14_a1	-	Liverpool Epidemic Strain
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.19601	51.3	-	FFDU01	111	2531	2165	2/9/16	3/21/17	Scaffold	SC	SAMEA2674249	GCA_900028095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/095/GCA_900028095.1_14555_6_48	-	2842STDY5881485
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.62894	38.9	-	FLPL01	112	1603	1469	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3995853	GCA_900088055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/055/GCA_900088055.1_TC-2-2-5	-	-
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.19578	39.5	-	CMRV01	102	2446	2187	3/23/15	3/4/17	Contig	SC	SAMEA2062385	GCA_001103825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/825/GCA_001103825.1_9803_8_57	-	6B
Escherichia coli 90.0039	1005401	PRJNA65599	65599	Proteobacteria	Gammaproteobacteria	5.3661	50.4	-	ANLL01	360	5860	5389	12/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN01041329	GCA_000316405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/405/GCA_000316405.2_ASM31640v2	-	90.0039
Mycobacterium tuberculosis TKK_04_0158	1448607	PRJNA235612	235612	Terrabacteria group	Actinobacteria	4.42569	65.6	-	JJTI01	67	4344	4151	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586102	GCA_000657035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/035/GCA_000657035.1_Myco_tube_TKK_04_0158_V1	-	TKK_04_0158
Listeria monocytogenes	1639	PRJNA309241	309241	Terrabacteria group	Firmicutes	3.04428	38	-	LROQ01	87	3140	3036	2/17/16	3/1/17	Contig	National Institute for Communicable Diseases	SAMN04429771	GCA_001562595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/595/GCA_001562595.1_ASM156259v1	27056221	TCD918860
Campylobacter jejuni CVM 41975	1440064	PRJNA232337	232337	Proteobacteria	delta/epsilon subdivisions	1.72125	30.4	-	JAKT01	27	1810	1694	10/29/15	3/18/17	Contig	FDA/CVM	SAMN02887145	GCA_001419645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/645/GCA_001419645.1_Campylobacter_jejuni_CVM_41975_v1.0	-	CVM 41975
Salmonella enterica subsp. enterica serovar Heidelberg str. 41579	1124937	PRJNA78479	78479	Proteobacteria	Gammaproteobacteria	4.89016	52.1	-	AJGW01	61	5060	4785	3/27/12	5/19/17	Contig	FDA	SAMN01816202	GCA_000256625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/625/GCA_000256625.1_ASM25662v1	22628505	41579
Staphylococcus aureus M1072	1402609	PRJNA219959	219959	Terrabacteria group	Firmicutes	2.85869	32.8	-	JAXV01	20	3008	2848	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02360766	GCA_000532355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/355/GCA_000532355.1_Stap_aure_M1072_V1	-	M1072
Staphylococcus aureus M1086	1402610	PRJNA219960	219960	Terrabacteria group	Firmicutes	2.87674	32.9	-	JAXU01	15	3033	2872	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02360767	GCA_000532375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/375/GCA_000532375.1_Stap_aure_M1086_V1	-	M1086
Salmonella enterica subsp. enterica serovar Enteritidis str. 2010-1237	1179780	PRJNA162505	162505	Proteobacteria	Gammaproteobacteria	4.66624	52.1	-	AJVD01	44	4782	4460	5/8/12	5/19/17	Contig	Centers for Disease Control & Prevention	SAMN02415216	GCA_000261985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/261/985/GCA_000261985.1_CDC_2010-1237v1.0	-	2010-1237
Campylobacter jejuni	197	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.70059	30.3	-	JOVW01	45	1827	1711	11/10/15	3/18/17	Contig	FDA	SAMN02693043	GCA_001441735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/735/GCA_001441735.1_Campylobacter_jejuni_CVM_N15870-R_v1.0	-	CVM N15870
Listeria monocytogenes	1639	PRJNA309241	309241	Terrabacteria group	Firmicutes	3.02414	37.9	-	LROP01	48	3119	3027	2/17/16	3/1/17	Contig	National Institute for Communicable Diseases	SAMN04429772	GCA_001562615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/615/GCA_001562615.1_ASM156261v1	27056221	TCD918857
Mycobacterium tuberculosis TKK_04_0159	1448608	PRJNA235613	235613	Terrabacteria group	Actinobacteria	4.40605	65.5	-	JJTH01	4	4289	4099	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586103	GCA_000657055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/055/GCA_000657055.1_Myco_tube_TKK_04_0159_V1	-	TKK_04_0159
Escherichia coli 90.2281	1005402	PRJNA65601	65601	Proteobacteria	Gammaproteobacteria	5.2575	50.3	-	ANLM01	369	5632	5221	12/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN01041333	GCA_000316425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/425/GCA_000316425.2_ASM31642v2	-	90.2281
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06076	39.6	-	COBC02	146	2223	2019	3/23/15	3/11/17	Contig	SC	SAMEA1463302	GCA_001103865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/865/GCA_001103865.2_7622_2_35	-	BR1105
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.64247	38.9	-	FLPN01	83	1630	1491	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3995847	GCA_900088065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/065/GCA_900088065.1_TC-2-1-5	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.19962	51.6	-	FFDW01	75	2549	2194	2/9/16	3/21/17	Scaffold	SC	SAMEA2674253	GCA_900028105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/105/GCA_900028105.1_14555_6_50	-	2842STDY5881487
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.46116	66.5	-	CCOZ01	72	6179	6005	9/6/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2732152	GCA_000824025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/025/GCA_000824025.1_LES_CF_sputum_CF03_contigs_16_a1	-	Liverpool Epidemic Strain
Acinetobacter baumannii 1392509	1310775	PRJNA194851	194851	Proteobacteria	Gammaproteobacteria	4.02246	39.1	-	JFXJ01	100	3991	3720	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415060	GCA_000588735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/735/GCA_000588735.1_ASM58873v1	-	1392509
Streptococcus agalactiae	1311	PRJNA342556	342556	Terrabacteria group	Firmicutes	2.0651	35.1	-	MJHR01	35	2116	1998	10/28/16	3/20/17	Contig	MIT	SAMN05762129	GCA_001856425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/425/GCA_001856425.1_ASM185642v1	-	197-16-B-RAT
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	1.99228	41.2	-	FIMV01	25	2018	1902	2/10/16	3/19/17	Contig	SC	SAMEA1566098	GCA_900059485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/485/GCA_900059485.1_8337_6_18	-	BM257a
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.41626	50.8	-	CWUQ01	402	5004	4056	7/16/15	2/24/17	Scaffold	SC	SAMEA3345020	GCA_001258355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/355/GCA_001258355.1_H14152025501	-	25501ss_1
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.0882	68.2	-	CHFC01	70	7329	6834	4/21/15	3/26/17	Scaffold	SC	SAMEA1483589	GCA_001320365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/365/GCA_001320365.1_7910_5_8	-	59
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.01697	47.5	-	CWOF01	80	3801	3464	7/17/15	3/26/17	Scaffold	SC	SAMEA889377	GCA_001259495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/495/GCA_001259495.1_4056_5_9	-	A76
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.21214	28.9	-	FADO01	820	3878	3709	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664177	GCA_900012795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/795/GCA_900012795.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.15128	45.2	-	MIUY01	128	4934	4764	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN03358835	GCA_001728565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/565/GCA_001728565.1_ASM172856v1	-	CDC_K5485
Klebsiella pneumoniae	573	PRJNA381148	381148	Proteobacteria	Gammaproteobacteria	5.63124	56.8	-	NBOM01	67	5737	5443	4/24/17	4/26/17	Scaffold	St. Luke's Medical Center	SAMN06670985	GCA_002108285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/285/GCA_002108285.1_ASM210828v1	-	ARPG-379
Enterococcus faecium	1352	PRJEB18432	356030	Terrabacteria group	Firmicutes	2.69017	38.3	-	FRDX01	147	2722	2497	12/8/16	3/28/17	Scaffold	RCPCM	SAMEA18413668	GCA_900143455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/455/GCA_900143455.1_Hp_22-12_05	-	-
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.76258	67.8	-	CGFH01	873	3801	3126	3/15/15	3/27/17	Scaffold	SC	SAMEA751517	GCA_001333875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/875/GCA_001333875.1_5633_2_3	-	B008
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65966	31.4	-	FBBB01	19	1719	1624	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683086	GCA_001496835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/835/GCA_001496835.1_H053780444	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18546	64.2	-	CSUH01	40	5195	5048	3/24/15	3/18/17	Scaffold	SC	SAMEA1464948	GCA_001214185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/185/GCA_001214185.1_7396_6_67	-	PAP019
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82894	64.2	-	CSWR01	48	4860	4699	3/24/15	3/18/17	Scaffold	SC	SAMEA1464968	GCA_001214205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/205/GCA_001214205.1_7396_7_4	-	PAP052
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.7393	31.1	-	FBKY01	75	1772	1656	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683348	GCA_001496855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/855/GCA_001496855.1_H094560718	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.70212	67.6	-	CGFV01	1157	3757	2965	3/15/15	3/27/17	Scaffold	SC	SAMEA751518	GCA_001333895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/895/GCA_001333895.1_5633_2_4	-	B010
Enterococcus faecium	1352	PRJEB18432	356030	Terrabacteria group	Firmicutes	2.77834	38	-	FREG01	384	2903	2562	12/8/16	3/28/17	Scaffold	RCPCM	SAMEA18414418	GCA_900143475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/475/GCA_900143475.1_Hp_23-9_05	-	-
Klebsiella pneumoniae	573	PRJNA381148	381148	Proteobacteria	Gammaproteobacteria	5.37262	57.4	-	NBOI01	43	5391	5146	4/24/17	4/26/17	Scaffold	St. Luke's Medical Center	SAMN06670981	GCA_002108315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/315/GCA_002108315.1_ASM210831v1	-	ARPG-315
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.07263	45.3	-	MIVB01	169	4824	4630	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368335	GCA_001728575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/575/GCA_001728575.1_ASM172857v1	-	CDC_K5579
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.51325	29.2	-	FADS01	1625	4154	3878	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664181	GCA_900012825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/825/GCA_900012825.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.0076	47.5	-	CWOH01	75	3792	3491	7/16/15	3/26/17	Scaffold	SC	SAMEA889378	GCA_001259555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/555/GCA_001259555.1_4056_5_1	-	A46
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.12698	68.2	-	CGEY01	64	7379	6874	3/15/15	3/26/17	Scaffold	SC	SAMEA1483590	GCA_001320395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/395/GCA_001320395.1_7910_5_22	-	612
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.70886	50.7	-	CXHE01	392	5328	4545	7/16/15	2/24/17	Scaffold	SC	SAMEA2003372	GCA_001258375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/375/GCA_001258375.1_8289_7_36	-	75637
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04037	41.2	-	FINI01	23	2056	1933	2/10/16	3/19/17	Contig	SC	SAMEA1566021	GCA_900059495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/495/GCA_900059495.1_8337_6_31	-	BM358a
Streptococcus agalactiae	1311	PRJNA342556	342556	Terrabacteria group	Firmicutes	2.06078	35.1	-	MJHS01	38	2106	1998	10/28/16	3/20/17	Contig	MIT	SAMN05762133	GCA_001856445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/445/GCA_001856445.1_ASM185644v1	-	198-16-B-RAT
Acinetobacter baumannii 1391434	1310762	PRJNA194838	194838	Proteobacteria	Gammaproteobacteria	3.68418	39	-	JFXH01	51	3579	3326	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415053	GCA_000588755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/755/GCA_000588755.1_ASM58875v1	-	1391434
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.45749	66.5	-	CCOK01	64	6176	6007	9/6/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2732153	GCA_000824045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/045/GCA_000824045.1_LES_CF_sputum_CF03_contigs_17_a1	-	Liverpool Epidemic Strain
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.155	51.6	-	FFDX01	75	2515	2129	2/9/16	3/21/17	Scaffold	SC	SAMEA2674264	GCA_900028115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/115/GCA_900028115.1_14555_6_56	-	2842STDY5881493
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63374	38.9	-	FLPK01	55	1624	1487	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3995848	GCA_900088075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/075/GCA_900088075.1_TC-2-1-6	-	-
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.04053	39.7	-	CPRR01	63	2259	2012	3/22/15	3/4/17	Contig	SC	SAMEA1020711	GCA_001103965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/965/GCA_001103965.1_5901_7_12	-	41_PMEN14
Escherichia coli 93.0055	1005403	PRJNA65603	65603	Proteobacteria	Gammaproteobacteria	5.32014	50.3	-	ANLN01	369	5727	5302	12/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN01041334	GCA_000316445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/445/GCA_000316445.2_ASM31644v2	-	93.0055
Mycobacterium tuberculosis TKK_04_0104	1448609	PRJNA235614	235614	Terrabacteria group	Actinobacteria	4.4007	65.6	-	JJTG01	1	4278	4115	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02586104	GCA_000657075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/075/GCA_000657075.1_Myco_tube_TKK_04_0104_V1	-	TKK_04_0104
Listeria monocytogenes	1639	PRJEB10730	310461	Terrabacteria group	Firmicutes	2.86597	37.9	-	CYUP01	30	2882	2812	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540834	GCA_001564495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/495/GCA_001564495.1_LM05-00008_assembly	-	LM05-00008
Campylobacter jejuni	197	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.69242	30.4	-	JOUH01	107	1768	1652	11/10/15	3/18/17	Contig	FDA	SAMN02693021	GCA_001441755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/755/GCA_001441755.1_Campylobacter_jejuni_CVM_N1630_v1.0	-	CVM N1630
Salmonella enterica subsp. enterica serovar Typhi str. UJ816A	1169661	PRJNA157359	157359	Proteobacteria	Gammaproteobacteria	4.62792	51.9	-	AJTE01	334	5000	4453	5/14/12	5/19/17	Contig	University of Hyderabad	SAMN02415289	GCA_000262615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/615/GCA_000262615.1_SalTypUJ816A_1.0	22933755	UJ816A
Staphylococcus aureus M1098	1402611	PRJNA219961	219961	Terrabacteria group	Firmicutes	2.91836	32.9	-	JAXT01	20	3064	2899	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02360768	GCA_000532395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/395/GCA_000532395.1_Stap_aure_M1098_V1	-	M1098
Staphylococcus aureus M1104	1402612	PRJNA219962	219962	Terrabacteria group	Firmicutes	2.94075	33	-	JAXS01	17	3081	2915	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02360769	GCA_000532415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/415/GCA_000532415.1_Stap_aure_M1104_V1	-	M1104
Salmonella enterica subsp. enterica serovar Typhi str. UJ308A	1169660	PRJNA157357	157357	Proteobacteria	Gammaproteobacteria	4.61592	51.8	-	AJTD01	416	5035	4434	5/14/12	5/19/17	Contig	University of Hyderabad	SAMN02415288	GCA_000262635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/635/GCA_000262635.1_SalTypUJ308A_1.0	22933755	UJ308A
Campylobacter jejuni	197	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.72793	30.2	-	JOUG01	74	1820	1691	11/10/15	3/18/17	Contig	FDA	SAMN02693016	GCA_001442025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/025/GCA_001442025.1_Campylobacter_jejuni_CVM_N15262_v1.0	-	CVM N15262
Listeria monocytogenes	1639	PRJEB10731	310462	Terrabacteria group	Firmicutes	2.91269	37.9	-	CYUR01	25	2952	2891	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540835	GCA_001564515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/515/GCA_001564515.1_LM05-00065_assembly	-	LM05-00065
Mycobacterium tuberculosis NRITLD44	1455263	PRJNA237385	237385	Terrabacteria group	Actinobacteria	4.32678	65.4	-	JJTF01	211	4383	4068	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628478	GCA_000657095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/095/GCA_000657095.1_Myco_tube_NRITLD44_V1	-	NRITLD44
Escherichia coli 93.0056	1005404	PRJNA65605	65605	Proteobacteria	Gammaproteobacteria	5.29307	50.3	-	ANLO01	361	5663	5245	12/4/12	2/22/17	Scaffold	Institute for Genome Sciences	SAMN01041335	GCA_000316465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/465/GCA_000316465.1_ASM31646v1	-	93.0056
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00009	39.7	-	CODF02	144	2145	1957	3/23/15	3/11/17	Contig	SC	SAMEA1463119	GCA_001104025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/025/GCA_001104025.2_7622_3_95	-	GL3061
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63518	38.9	-	FLPG01	62	1623	1485	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3995844	GCA_900088085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/085/GCA_900088085.1_TC-2-1-2	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16643	51.5	-	FEQK01	87	2519	2148	2/9/16	3/21/17	Scaffold	SC	SAMEA2674540	GCA_900029015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/015/GCA_900029015.1_14355_7_74	-	2842STDY5881703
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.46009	66.5	-	CCOL01	79	6179	6005	9/6/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2732154	GCA_000824065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/065/GCA_000824065.1_LES_CF_sputum_CF03_contigs_18_a1	-	Liverpool Epidemic Strain
Acinetobacter baumannii 1413735	1310776	PRJNA194852	194852	Proteobacteria	Gammaproteobacteria	4.10181	39.1	-	JFWZ01	59	4024	3795	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415056	GCA_000588775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/775/GCA_000588775.1_ASM58877v1	-	1413735
Streptococcus agalactiae	1311	PRJNA342556	342556	Terrabacteria group	Firmicutes	2.06875	35.1	-	MJHU01	37	2126	1996	10/28/16	3/20/17	Contig	MIT	SAMN05762135	GCA_001856455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/455/GCA_001856455.1_ASM185645v1	-	200-16-B-RAT
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.08629	41.2	-	FIPH01	22	2104	1990	2/10/16	3/19/17	Contig	SC	SAMEA1566036	GCA_900059505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/505/GCA_900059505.1_8525_5_19	-	SS13
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.78446	50.6	-	CWXV01	452	5391	4530	7/16/15	2/24/17	Scaffold	SC	SAMEA2434373	GCA_001258395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/395/GCA_001258395.1_12850_1_46	-	KY 757
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.13381	68.2	-	CHFB01	66	7367	6870	4/21/15	3/26/17	Scaffold	SC	SAMEA1483591	GCA_001320425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/425/GCA_001320425.1_7910_5_17	-	AH3
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.97751	47.5	-	CWNV01	71	3779	3519	7/16/15	3/26/17	Scaffold	SC	SAMEA889339	GCA_001259635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/635/GCA_001259635.1_4056_5_12	-	A68
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.23184	28.9	-	FADY01	1260	3853	3631	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664186	GCA_900012835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/835/GCA_900012835.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.08299	45.3	-	MIUZ01	122	4838	4670	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368333	GCA_001728585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/585/GCA_001728585.1_ASM172858v1	-	CDC_K5512
Klebsiella pneumoniae	573	PRJNA381148	381148	Proteobacteria	Gammaproteobacteria	5.46062	57	-	NBOQ01	74	5484	5222	4/24/17	4/26/17	Scaffold	St. Luke's Medical Center	SAMN06670989	GCA_002108335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/335/GCA_002108335.1_ASM210833v1	-	ARP-657
Enterococcus faecium	1352	PRJEB18432	356030	Terrabacteria group	Firmicutes	3.16249	38	-	FREK01	757	3078	2747	12/8/16	3/28/17	Scaffold	RCPCM	SAMEA18411418	GCA_900143495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/495/GCA_900143495.1_Hp_21-11_05	-	-
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.77713	67.8	-	CFZG01	777	3781	3154	3/15/15	3/27/17	Scaffold	SC	SAMEA751520	GCA_001333915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/915/GCA_001333915.1_5476_6_12	-	B023
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.84611	31	-	FBAF01	56	1939	1818	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683070	GCA_001496875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/875/GCA_001496875.1_H132600169	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82591	64.1	-	CSZN01	14	4814	4586	3/24/15	3/18/17	Scaffold	SC	SAMEA1317717	GCA_001214225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/225/GCA_001214225.1_7520_7_40	-	PAP160
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15768	64.1	-	CSYF01	28	5267	5077	3/24/15	3/18/17	Scaffold	SC	SAMEA1464877	GCA_001214265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/265/GCA_001214265.1_7396_8_77	-	PAP125
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65971	31.4	-	FBAZ01	24	1714	1622	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683092	GCA_001496895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/895/GCA_001496895.1_EC4448	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.74417	67.7	-	CGHJ01	929	3790	3064	3/15/15	3/27/17	Scaffold	SC	SAMEA751521	GCA_001333935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/935/GCA_001333935.1_5476_7_1	-	B025
Enterococcus faecium	1352	PRJEB18536	356851	Terrabacteria group	Firmicutes	2.72773	38.2	-	FRXX01	307	2872	2545	12/9/16	4/10/17	Scaffold	Moscow	SAMEA23868418	GCA_900148525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/525/GCA_900148525.1_Hp_23-14_05	-	-
Klebsiella pneumoniae	573	PRJNA381148	381148	Proteobacteria	Gammaproteobacteria	5.39913	57.4	-	NBOH01	88	5466	5178	4/24/17	4/26/17	Scaffold	St. Luke's Medical Center	SAMN06670980	GCA_002108345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/345/GCA_002108345.1_ASM210834v1	-	ARPG-281
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.10185	45.3	-	MIVA01	108	4837	4702	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368334	GCA_001728625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/625/GCA_001728625.1_ASM172862v1	-	CDC_K5528
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.25641	29	-	FADZ01	1770	3869	3612	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664187	GCA_900012845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/845/GCA_900012845.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.02227	47.5	-	CWRO01	50	3812	3674	7/16/15	3/26/17	Scaffold	SC	SAMEA889221	GCA_001259715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/715/GCA_001259715.1_5174_5_5	-	4538
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.22086	68.1	-	CHKR01	88	7493	6997	4/21/15	3/26/17	Scaffold	SC	SAMEA1483592	GCA_001320465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/465/GCA_001320465.1_7910_5_30	-	11
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.3613	50.9	-	CXEN01	542	4649	4087	7/16/15	2/24/17	Scaffold	SC	SAMEA954622	GCA_001258415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/415/GCA_001258415.1_5417_1_8	-	20051541_1361374
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.09573	41.1	-	FIPT01	23	2133	2022	2/10/16	3/19/17	Contig	SC	SAMEA1566178	GCA_900059525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/525/GCA_900059525.1_8525_5_32	-	SS27
Streptococcus agalactiae	1311	PRJNA342556	342556	Terrabacteria group	Firmicutes	2.06372	35.1	-	MJHV01	35	2126	1997	10/28/16	3/20/17	Contig	MIT	SAMN05762136	GCA_001856475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/475/GCA_001856475.1_ASM185647v1	-	0201-16-B-RAT
Acinetobacter baumannii 1406182	1310796	PRJNA194872	194872	Proteobacteria	Gammaproteobacteria	4.138	39.1	-	JFXK01	107	4114	3823	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415055	GCA_000588795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/795/GCA_000588795.1_ASM58879v1	-	1406182
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.48512	66.4	-	CCOA01	59	6194	6026	9/5/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2732155	GCA_000824085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/085/GCA_000824085.1_LES_CF_sputum_CF03_contigs_20_a1	-	Liverpool Epidemic Strain
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11178	51.8	-	FETH01	78	2459	2114	2/9/16	3/21/17	Scaffold	SC	SAMEA2673961	GCA_900029025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/025/GCA_900029025.1_14355_5_59	-	2842STDY5881112
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63155	38.9	-	FLPH01	63	1621	1484	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3995850	GCA_900088095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/095/GCA_900088095.1_TC-2-2-2	-	-
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.05165	39.6	-	CMUR01	80	2217	1978	3/22/15	3/11/17	Contig	SC	SAMEA1022784	GCA_001104085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/085/GCA_001104085.1_5737_7_11	-	176
Escherichia coli 94.0618	1005405	PRJNA65607	65607	Proteobacteria	Gammaproteobacteria	5.29425	50.3	-	ANLP01	362	5697	5261	12/4/12	2/22/17	Scaffold	Institute for Genome Sciences	SAMN01041339	GCA_000316485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/485/GCA_000316485.1_ASM31648v1	-	94.0618
Mycobacterium tuberculosis NRITLD45	1455264	PRJNA237386	237386	Terrabacteria group	Actinobacteria	4.42983	65.5	-	JJTE01	50	4346	4132	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628479	GCA_000657115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/115/GCA_000657115.1_Myco_tube_NRITLD45_V1	-	NRITLD45
Listeria monocytogenes	1639	PRJEB10732	310463	Terrabacteria group	Firmicutes	2.86542	37.9	-	CYUS01	28	2881	2812	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540836	GCA_001564535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/535/GCA_001564535.1_LM05-00172_assembly	-	LM05-00172
Campylobacter jejuni	197	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.78037	30.2	-	JOUQ01	130	1912	1742	11/10/15	3/18/17	Contig	FDA	SAMN02693031	GCA_001442185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/185/GCA_001442185.1_Campylobacter_jejuni_CVM_N279_v1.0	-	CVM N279
Salmonella enterica subsp. enterica serovar Senftenberg str. SS209	1147753	PRJEA82547	82547	Proteobacteria	Gammaproteobacteria	5.01689	51.7	-	CAGQ01	109	5152	4844	2/16/12	5/19/17	Contig	Institut National de la Recherche Agronomique (INRA)	SAMEA2272617	GCA_000263295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/295/GCA_000263295.1_SE-SS209	-	SS209
Staphylococcus aureus M1375	1402613	PRJNA219963	219963	Terrabacteria group	Firmicutes	2.92385	32.9	-	JAXR01	15	3080	2911	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02360770	GCA_000532435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/435/GCA_000532435.1_Stap_aure_M1375_V1	-	M1375
Staphylococcus aureus M1376	1402614	PRJNA219964	219964	Terrabacteria group	Firmicutes	2.90147	32.9	-	JAXQ01	11	3021	2861	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02360771	GCA_000532455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/455/GCA_000532455.1_Stap_aure_M1376_V1	-	M1376
Salmonella enterica subsp. enterica serovar Typhi str. ST0208	1176487	PRJNA160181	160181	Proteobacteria	Gammaproteobacteria	4.69077	52	-	AJXA01	222	4969	4524	6/13/12	5/19/17	Contig	University of Malaya	SAMN00989039	GCA_000267565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/565/GCA_000267565.1_YKP860805.1	22933756	ST0208
Campylobacter jejuni	197	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.72355	30.2	-	JOUW01	89	1824	1690	11/10/15	3/18/17	Contig	FDA	SAMN02693014	GCA_001442255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/255/GCA_001442255.1_Campylobacter_jejuni_CVM_N534_v1.0	-	CVM N534
Listeria monocytogenes	1639	PRJEB10733	310464	Terrabacteria group	Firmicutes	2.86667	37.9	-	CYUT01	33	2872	2808	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540837	GCA_001564555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/555/GCA_001564555.1_LM05-00190_assembly	-	LM05-00190
Mycobacterium tuberculosis NRITLD47	1455266	PRJNA237388	237388	Terrabacteria group	Actinobacteria	4.40019	65.5	-	JJTD01	20	4304	4114	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628481	GCA_000657135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/135/GCA_000657135.1_Myco_tube_NRITLD47_V1	-	NRITLD47
Escherichia coli 99.0672	1005421	PRJNA65639	65639	Proteobacteria	Gammaproteobacteria	5.38939	50.2	-	ANMD01	488	5893	5416	12/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN01041353	GCA_000316705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/705/GCA_000316705.2_ASM31670v2	-	99.0672
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.08747	39.6	-	CMKP01	40	2304	2073	3/23/15	3/11/17	Contig	SC	SAMEA1029327	GCA_001104105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/105/GCA_001104105.1_7054_4_5	-	SMRU3029
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.62993	38.9	-	FLPJ01	63	1620	1484	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3995849	GCA_900088115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/115/GCA_900088115.1_TC-2-2-1	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.19874	51.6	-	FEVJ01	114	2552	2145	2/9/16	3/21/17	Scaffold	SC	SAMEA2674061	GCA_900029035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/035/GCA_900029035.1_14324_4_9	-	2842STDY5881254
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.45641	66.5	-	CCOD01	63	6173	6004	9/6/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2732156	GCA_000824105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/105/GCA_000824105.1_LES_CF_sputum_CF03_contigs_21_a1	-	Liverpool Epidemic Strain
Acinetobacter baumannii 1397513	1310768	PRJNA194844	194844	Proteobacteria	Gammaproteobacteria	3.99325	39	-	JFXI01	98	3958	3716	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02415054	GCA_000588815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/815/GCA_000588815.1_ASM58881v1	-	1397513
Streptococcus agalactiae	1311	PRJNA342556	342556	Terrabacteria group	Firmicutes	2.07429	35.1	-	MJHT01	37	2129	2007	10/28/16	3/20/17	Contig	MIT	SAMN05762134	GCA_001856505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/505/GCA_001856505.1_ASM185650v1	-	0199-16-B-RAT
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04598	41.2	-	FIQN01	20	2060	1951	2/10/16	3/19/17	Contig	SC	SAMEA1566160	GCA_900059545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/545/GCA_900059545.1_8525_5_52	-	SS74
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.5565	50.8	-	CXCX01	359	4905	4404	7/16/15	2/24/17	Scaffold	SC	SAMEA954705	GCA_001258435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/435/GCA_001258435.1_5236_6_1	-	Sh658_440929
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.1535	68.2	-	CFVR01	73	7369	6855	3/15/15	3/26/17	Scaffold	SC	SAMEA1483593	GCA_001320505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/505/GCA_001320505.1_7910_5_15	-	EB5661
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.92278	48	-	CWPG01	221	3663	3385	7/16/15	3/26/17	Scaffold	SC	SAMEA889293	GCA_001259875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/875/GCA_001259875.1_2956_6_6	-	4661
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.12014	28.5	-	FADX01	266	3778	3655	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664189	GCA_900012865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/865/GCA_900012865.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.17433	45.2	-	MIVC01	104	4989	4822	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368336	GCA_001728645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/645/GCA_001728645.1_ASM172864v1	-	CDC_K5582
Klebsiella pneumoniae	573	PRJNA381148	381148	Proteobacteria	Gammaproteobacteria	5.45438	57.1	-	NBOR01	79	5476	5209	4/24/17	4/26/17	Scaffold	St. Luke's Medical Center	SAMN06670990	GCA_002108355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/355/GCA_002108355.1_ASM210835v1	-	ARP-664
Enterococcus faecium	1352	PRJEB18536	356851	Terrabacteria group	Firmicutes	2.9137	37.7	-	FRXU01	269	3039	2742	12/9/16	4/10/17	Scaffold	Moscow	SAMEA23869918	GCA_900148565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/565/GCA_900148565.1_Hp_24-3_05	-	-
Bordetella pertussis	520	PRJEB12734	312330	Proteobacteria	Betaproteobacteria	3.85756	67.8	-	FJMX01	249	3701	3338	2/25/16	3/27/17	Scaffold	SC	SAMEA3871515	GCA_900067265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/067/265/GCA_900067265.1_NeoBp6	-	Bpst24
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.73649	31.1	-	FBIM01	78	1780	1668	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683285	GCA_001496915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/915/GCA_001496915.1_SWAN325	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16007	64.1	-	CSWU01	32	5271	5085	3/24/15	3/18/17	Scaffold	SC	SAMEA1464861	GCA_001214285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/285/GCA_001214285.1_7396_7_43	-	PAP091
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15867	64.1	-	CSWV01	18	5260	5080	3/24/15	3/18/17	Scaffold	SC	SAMEA1464945	GCA_001214305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/305/GCA_001214305.1_7396_7_44	-	PAP092
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75043	31.2	-	FBDJ01	21	1844	1743	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683149	GCA_001496935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/935/GCA_001496935.1_EC4978	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.81697	67.9	-	CGIC01	490	3708	3648	3/15/15	8/23/17	Scaffold	SC	SAMEA751476	GCA_900067715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/067/715/GCA_900067715.1_5476_5_9	-	B047
Enterococcus faecium	1352	PRJEB18536	356851	Terrabacteria group	Firmicutes	3.32434	38	-	FRYF01	1175	3245	2801	12/9/16	3/28/17	Scaffold	Moscow	SAMEA23859418	GCA_900148585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/585/GCA_900148585.1_Hp_5-7_05	-	-
Klebsiella pneumoniae	573	PRJNA381148	381148	Proteobacteria	Gammaproteobacteria	5.52132	57.1	-	NBOP01	122	5610	5307	4/24/17	4/26/17	Scaffold	St. Luke's Medical Center	SAMN06670988	GCA_002108395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/395/GCA_002108395.1_ASM210839v1	-	ARPG-489
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.10777	45.3	-	MIVD01	147	4846	4668	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN03358836	GCA_001728655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/655/GCA_001728655.1_ASM172865v1	-	CDC_K5618
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.25283	29.3	-	FAEB01	1810	3891	3640	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664190	GCA_900012875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/875/GCA_900012875.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.9367	47.6	-	CWSL01	37	3733	3546	7/16/15	3/26/17	Scaffold	SC	SAMEA889299	GCA_001259995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/995/GCA_001259995.1_5174_8_4	-	A215
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.12069	68.2	-	CFNN01	61	7342	6833	3/15/15	3/26/17	Scaffold	SC	SAMEA1483594	GCA_001320545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/545/GCA_001320545.1_7910_5_9	-	KAS
Shigella sonnei	624	PRJEB2460	204320	Proteobacteria	Gammaproteobacteria	4.69911	50.7	-	CXGM01	443	5474	4471	7/17/15	2/24/17	Scaffold	SC	SAMEA1027664	GCA_001258455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/455/GCA_001258455.1_7353_1_21	-	H112920489
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.11461	41.1	-	FIFY01	51	2159	2015	2/10/16	3/19/17	Contig	SC	SAMEA1316582	GCA_900059755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/755/GCA_900059755.1_7114_5_25	-	LSS25
Streptococcus agalactiae serogroup III	216495	PRJNA324749	324749	Terrabacteria group	Firmicutes	2.16081	35.5	-	MCQO01	47	2205	2083	11/17/16	3/20/17	Contig	GSK Vaccines	SAMN05213953	GCA_001880505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/505/GCA_001880505.1_ASM188050v1	27574519	GZ05
Acinetobacter baumannii 44895_9	1310893	PRJNA194970	194970	Proteobacteria	Gammaproteobacteria	4.05933	39.2	-	JFVA01	135	4066	3768	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570429	GCA_000588895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/895/GCA_000588895.1_ASM58889v1	-	44895_9
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.46207	66.5	-	CCOM01	72	6182	6006	9/6/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2732173	GCA_000824125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/125/GCA_000824125.1_LES_CF_sputum_CF03_contigs_23_a1	-	Liverpool Epidemic Strain
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16552	51.5	-	FEXO01	77	2511	2154	2/9/16	3/21/17	Scaffold	SC	SAMEA2674425	GCA_900029045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/045/GCA_900029045.1_14324_5_88	-	2842STDY5881621
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63296	38.9	-	FLPD01	57	1623	1491	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA3995852	GCA_900088135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/135/GCA_900088135.1_TC-2-2-4	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.05816	39.6	-	CROB01	26	2254	2016	3/23/15	3/11/17	Contig	SC	SAMEA1025181	GCA_001104225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/225/GCA_001104225.1_6755_5_13	-	SMRU1165
Escherichia coli 97.1742	1005418	PRJNA65633	65633	Proteobacteria	Gammaproteobacteria	5.12134	50.3	-	ANMA01	345	5548	4963	12/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN01041352	GCA_000316725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/725/GCA_000316725.2_ASM31672v2	-	97.1742
Mycobacterium tuberculosis NRITLD49	1455268	PRJNA237390	237390	Terrabacteria group	Actinobacteria	4.39086	65.6	-	JJTC01	88	4336	4114	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628483	GCA_000657155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/155/GCA_000657155.1_Myco_tube_NRITLD49_V1	-	NRITLD49
Listeria monocytogenes	1639	PRJEB10734	310465	Terrabacteria group	Firmicutes	2.91831	37.8	-	CYUU01	29	2974	2909	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540838	GCA_001564575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/575/GCA_001564575.1_LM05-00401_assembly	-	LM05-00401
Campylobacter jejuni	197	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.68684	30.4	-	JOVD01	43	1784	1668	11/10/15	3/18/17	Contig	FDA	SAMN02693026	GCA_001442295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/295/GCA_001442295.1_Campylobacter_jejuni_CVM_N9016_v1.0	-	CVM N9016
Salmonella enterica subsp. enterica serovar Newport str. CVM 35185	789642	PRJNA49407	49407	Proteobacteria	Gammaproteobacteria	4.70578	51.9	-	AHTJ01	75	4735	4517	6/25/12	5/19/17	Contig	FDA	SAMN00811533	GCA_000272515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/515/GCA_000272515.1_ASM27251v1	22933769	CVM 35185
Staphylococcus aureus M1381	1402615	PRJNA219965	219965	Terrabacteria group	Firmicutes	2.86777	32.8	-	JAXP01	20	3031	2870	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02360772	GCA_000532475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/475/GCA_000532475.1_Stap_aure_M1381_V1	-	M1381
Staphylococcus aureus M1389	1402616	PRJNA219966	219966	Terrabacteria group	Firmicutes	2.88046	32.9	-	JAXO01	13	3013	2857	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02360773	GCA_000532495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/495/GCA_000532495.1_Stap_aure_M1389_V1	-	M1389
Salmonella enterica subsp. enterica serovar Newport str. CVM 35188	789646	PRJNA49415	49415	Proteobacteria	Gammaproteobacteria	4.70852	52.1	-	AHTN01	51	4749	4520	6/25/12	5/19/17	Contig	FDA	SAMN01813479	GCA_000272535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/535/GCA_000272535.1_ASM27253v1	-	CVM 35188
Campylobacter jejuni	197	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.81645	30.2	-	JOVH01	68	1935	1795	11/10/15	3/18/17	Contig	FDA	SAMN02693034	GCA_001442335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/335/GCA_001442335.1_Campylobacter_jejuni_CVM_N9095_v1.0	-	CVM N9095
Listeria monocytogenes	1639	PRJEB10735	310466	Terrabacteria group	Firmicutes	3.00691	37.9	-	CYUV01	28	3023	2950	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540839	GCA_001564595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/595/GCA_001564595.1_LM05-00704_assembly	-	LM05-00704
Mycobacterium tuberculosis NRITLD50	1455269	PRJNA237391	237391	Terrabacteria group	Actinobacteria	4.38994	65.6	-	JJTB01	84	4321	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628484	GCA_000657175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/175/GCA_000657175.1_Myco_tube_NRITLD50_V1	-	NRITLD50
Escherichia coli 97.0003	1005416	PRJNA65629	65629	Proteobacteria	Gammaproteobacteria	5.1926	50.2	-	ANLZ01	115	5511	5083	12/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN01041349	GCA_000316745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/745/GCA_000316745.2_ASM31674v2	-	97.0003
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.14411	39.5	-	CLKY01	73	2364	2122	3/21/15	3/11/17	Contig	SC	SAMEA1028867	GCA_001104245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/245/GCA_001104245.1_6938_5_18	-	SMRU2658
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.7208	38.9	-	FLQO01	345	1653	1502	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA4000260	GCA_900088155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/155/GCA_900088155.1_STT-1-1-2-Cm	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11316	51.8	-	FEYR01	80	2462	2135	2/9/16	3/19/17	Scaffold	SC	SAMEA2674118	GCA_900029055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/055/GCA_900029055.1_14555_5_8	-	2842STDY5881349
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.45717	66.5	-	CCON01	63	6172	6008	9/5/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2732174	GCA_000824145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/145/GCA_000824145.1_LES_CF_sputum_CF03_contigs_24_a1	-	Liverpool Epidemic Strain
Acinetobacter baumannii 44895_8	1310892	PRJNA194969	194969	Proteobacteria	Gammaproteobacteria	4.06634	39.2	-	JFVB01	196	4069	3724	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570428	GCA_000588915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/915/GCA_000588915.1_ASM58891v1	-	44895_8
Streptococcus agalactiae serogroup III	216495	PRJNA324749	324749	Terrabacteria group	Firmicutes	2.15401	35.5	-	MCQP01	45	2194	2064	11/17/16	3/20/17	Contig	GSK Vaccines	SAMN05213954	GCA_001880515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/515/GCA_001880515.1_ASM188051v1	27574519	GZ06
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.05428	41.1	-	FIKH01	31	2045	1957	2/10/16	3/19/17	Contig	SC	SAMEA1316557	GCA_900059765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/765/GCA_900059765.1_7054_7_39	-	SS1038
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.60029	50.7	-	CWYU01	366	5019	4399	7/16/15	2/24/17	Scaffold	SC	SAMEA2445727	GCA_001258475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/475/GCA_001258475.1_12971_8_41	-	H111120276
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	6.99961	68.3	-	CFVK01	66	7221	6753	3/15/15	3/27/17	Scaffold	SC	SAMEA1483597	GCA_001320585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/585/GCA_001320585.1_7910_5_6	-	54
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.01247	47.5	-	CWRY01	48	3796	3647	7/16/15	3/26/17	Scaffold	SC	SAMEA889176	GCA_001260175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/175/GCA_001260175.1_5174_6_7	-	4662
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.21683	28.9	-	FAEA01	1197	3827	3637	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664191	GCA_900012885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/885/GCA_900012885.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.09961	45.3	-	MIVE01	131	4843	4659	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN03358837	GCA_001728665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/665/GCA_001728665.1_ASM172866v1	-	CDC_K5620
Klebsiella pneumoniae	573	PRJNA381148	381148	Proteobacteria	Gammaproteobacteria	5.62362	56.8	-	NBON01	75	5732	5441	4/24/17	4/26/17	Scaffold	St. Luke's Medical Center	SAMN06670986	GCA_002108405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/405/GCA_002108405.1_ASM210840v1	-	ARPG-380
Enterococcus faecium	1352	PRJEB18536	356851	Terrabacteria group	Firmicutes	2.88584	38.3	-	FRXQ01	170	2909	2698	12/9/16	4/10/17	Scaffold	Moscow	SAMEA23860168	GCA_900148595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/595/GCA_900148595.1_Hp_5-10_05	-	-
Spiroplasma cantharicola	362837	PRJNA253642	253642	Terrabacteria group	Tenericutes	1.17958	25	chromosome:NZ_CP012622.1/CP012622.1	-	1	1051	1011	9/11/15	4/16/17	Complete Genome	Academia Sinica	SAMN03955382	GCA_001281045.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/045/GCA_001281045.1_ASM128104v1	26494686	CC-1
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66061	31.4	-	FAXT01	28	1720	1627	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683003	GCA_001497015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/015/GCA_001497015.1_EC3735	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15644	64.1	-	CSYW01	21	5263	5084	3/24/15	3/18/17	Scaffold	SC	SAMEA1464854	GCA_001214345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/345/GCA_001214345.1_7396_8_95	-	PAP143
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.33443	63.8	-	CSWW01	186	5421	5150	3/24/15	3/18/17	Scaffold	SC	SAMEA1464967	GCA_001214405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/405/GCA_001214405.1_7396_7_45	-	PAP093
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68478	31.3	-	FAZC01	27	1745	1656	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683033	GCA_001497035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/035/GCA_001497035.1_H132340486	-	n/a
Bordetella pertussis STO1-CHOC-0019	1331279	PRJNA202182	202182	Proteobacteria	Betaproteobacteria	4.15026	67.7	-	AXRX02	120	4254	4181	10/24/13	12/26/13	Contig	JCVI	SAMN02436196	GCA_000479835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/479/835/GCA_000479835.2_gbp16v01	24356839	STO1-CHOC-0019
Enterococcus faecium	1352	PRJEB18536	356851	Terrabacteria group	Firmicutes	2.93714	38.2	-	FRYA01	657	2970	2644	12/9/16	3/28/17	Scaffold	Moscow	SAMEA23873668	GCA_900148605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/605/GCA_900148605.1_Hp_76-7_05	-	-
Klebsiella pneumoniae	573	PRJNA381148	381148	Proteobacteria	Gammaproteobacteria	5.66465	56.8	-	NBOO01	73	5778	5491	4/24/17	4/26/17	Scaffold	St. Luke's Medical Center	SAMN06670987	GCA_002108415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/415/GCA_002108415.1_ASM210841v1	-	ARPG-381
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.07794	45.3	-	MIVF01	119	4837	4663	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368339	GCA_001728695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/695/GCA_001728695.1_ASM172869v1	-	CDC_K5629
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.12494	28.7	-	FAEL01	1224	3775	3599	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664199	GCA_900012925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/925/GCA_900012925.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.06456	47.4	-	CWRR01	40	3857	3693	7/16/15	3/26/17	Scaffold	SC	SAMEA889333	GCA_001260295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/295/GCA_001260295.1_5174_6_10	-	1362
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.19259	68.1	-	CFVY01	63	7400	6907	3/15/15	3/26/17	Scaffold	SC	SAMEA1483598	GCA_001320615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/615/GCA_001320615.1_7910_5_14	-	EM1157
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.72266	50.7	-	CWTR01	391	5397	4523	7/16/15	2/24/17	Scaffold	SC	SAMEA3345047	GCA_001258515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/515/GCA_001258515.1_H14120049201	-	49201ss_1
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.04113	41.1	-	FIKG01	22	2049	1950	2/10/16	3/19/17	Contig	SC	SAMEA1316525	GCA_900059775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/775/GCA_900059775.1_7054_7_40	-	SS1039
Streptococcus agalactiae serogroup III	216495	PRJNA324749	324749	Terrabacteria group	Firmicutes	2.16705	35.4	-	MCQR01	42	2214	2089	11/17/16	3/20/17	Contig	GSK Vaccines	SAMN05213956	GCA_001880525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/525/GCA_001880525.1_ASM188052v1	27574519	GZ11
Acinetobacter baumannii 44895_4	1310888	PRJNA194965	194965	Proteobacteria	Gammaproteobacteria	4.02001	39.1	-	JFVE01	109	3973	3700	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570425	GCA_000588935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/935/GCA_000588935.1_ASM58893v1	-	44895_4
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.46134	66.5	-	CCOO01	77	6183	6005	9/5/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2732175	GCA_000824165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/165/GCA_000824165.1_LES_CF_sputum_CF03_contigs_25_a1	-	Liverpool Epidemic Strain
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.09713	51.8	-	FEYU01	79	2450	2119	2/9/16	3/19/17	Scaffold	SC	SAMEA2674128	GCA_900029065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/065/GCA_900029065.1_14555_5_11	-	2842STDY5881352
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63599	38.9	-	FLQB01	63	1625	1487	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA4000269	GCA_900088165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/165/GCA_900088165.1_STT-1-1-15-Cm	-	-
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07504	39.5	-	CKKE01	51	2284	2051	3/21/15	3/11/17	Contig	SC	SAMEA1024040	GCA_001104325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/325/GCA_001104325.1_6631_6_15	-	19A
Escherichia coli 96.0107	1005415	PRJNA65627	65627	Proteobacteria	Gammaproteobacteria	5.22491	50.3	-	ANLY01	334	5568	5176	12/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN01041343	GCA_000316765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/765/GCA_000316765.2_ASM31676v2	-	96.0107
Mycobacterium tuberculosis NRITLD51	1455270	PRJNA237392	237392	Terrabacteria group	Actinobacteria	4.38326	65.5	-	JJTA01	63	4322	4097	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628485	GCA_000657195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/195/GCA_000657195.1_Myco_tube_NRITLD51_V1	-	NRITLD51
Listeria monocytogenes	1639	PRJEB10736	310467	Terrabacteria group	Firmicutes	2.89066	37.9	-	CYUX01	18	2884	2819	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540840	GCA_001564615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/615/GCA_001564615.1_LM06-00444_assembly	-	LM06-00444
Campylobacter jejuni	197	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.64043	30.5	-	FBHK01	30	1710	1610	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683258	GCA_001488115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/115/GCA_001488115.1_CCN443	-	n/a
Salmonella enterica subsp. enterica serovar Newport str. CVM 21559	789647	PRJNA49417	49417	Proteobacteria	Gammaproteobacteria	4.74239	52.2	-	AHTO01	56	4835	4623	6/25/12	5/19/17	Contig	FDA	SAMN01805324	GCA_000272555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/555/GCA_000272555.1_ASM27255v1	-	CVM 21559
Staphylococcus aureus M1399	1402617	PRJNA219967	219967	Terrabacteria group	Firmicutes	2.87187	32.9	-	JAXN01	19	3011	2853	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02360774	GCA_000532515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/515/GCA_000532515.1_Stap_aure_M1399_V1	-	M1399
Staphylococcus aureus M1426	1402618	PRJNA219968	219968	Terrabacteria group	Firmicutes	2.93926	33	-	JAXM01	14	3059	2900	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02360775	GCA_000532535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/535/GCA_000532535.1_Stap_aure_M1426_V1	-	M1426
Salmonella enterica subsp. enterica serovar Newport str. CVM 19447	796737	PRJNA49621	49621	Proteobacteria	Gammaproteobacteria	4.66381	52.2	-	AHTP01	44	4721	4492	6/25/12	5/19/17	Contig	FDA	SAMN01816116	GCA_000272575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/575/GCA_000272575.1_ASM27257v1	-	CVM 19447
Campylobacter jejuni	197	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.80993	30.1	-	FBJA01	117	1923	1750	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683300	GCA_001488675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/488/675/GCA_001488675.1_CCN5	-	n/a
Listeria monocytogenes	1639	PRJEB10737	310468	Terrabacteria group	Firmicutes	2.86745	37.9	-	CYUZ01	35	2888	2815	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540841	GCA_001564635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/635/GCA_001564635.1_LM06-00581_assembly	-	LM06-00581
Mycobacterium tuberculosis NRITLD53	1455272	PRJNA237394	237394	Terrabacteria group	Actinobacteria	4.38211	65.6	-	JJSZ01	90	4314	4100	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628487	GCA_000657215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/215/GCA_000657215.1_Myco_tube_NRITLD53_V1	-	NRITLD53
Escherichia coli 96.0939	1005412	PRJNA65621	65621	Proteobacteria	Gammaproteobacteria	5.34072	50.3	-	ANLV01	394	5803	5327	12/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN01041348	GCA_000316785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/785/GCA_000316785.2_ASM31678v2	-	96.0939
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00831	39.7	-	CNVC02	109	2176	1987	3/22/15	3/11/17	Contig	SC	SAMEA1032728	GCA_001104405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/405/GCA_001104405.2_6999_6_7	-	263137
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63654	38.9	-	FLQH01	71	1622	1488	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA4000259	GCA_900088175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/175/GCA_900088175.1_STT-1-1-1-Cm	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12891	51.7	-	FEZN01	83	2498	2179	2/9/16	3/19/17	Scaffold	SC	SAMEA2674199	GCA_900029075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/075/GCA_900029075.1_14555_5_32	-	2842STDY5881373
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.45718	66.5	-	CCOP01	68	6176	6004	9/6/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2732176	GCA_000824185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/185/GCA_000824185.1_LES_CF_sputum_CF03_contigs_26_a1	-	Liverpool Epidemic Strain
Acinetobacter baumannii 24845_8	1310862	PRJNA194939	194939	Proteobacteria	Gammaproteobacteria	4.09523	39.1	-	JFWG01	134	4070	3726	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570317	GCA_000588955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/955/GCA_000588955.1_ASM58895v1	-	24845_8
Streptococcus agalactiae serogroup III	216495	PRJNA324749	324749	Terrabacteria group	Firmicutes	2.16413	35.4	-	MCQN01	50	2222	2086	11/17/16	3/20/17	Contig	GSK Vaccines	SAMN05213952	GCA_001880535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/535/GCA_001880535.1_ASM188053v1	27574519	GZ02
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.03693	41.2	-	FINV01	26	2048	1933	2/10/16	3/19/17	Contig	SC	SAMEA1566195	GCA_900059785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/785/GCA_900059785.1_8337_6_44	-	BM465
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.74762	50.7	-	CXIN01	394	5290	4571	7/16/15	2/24/17	Scaffold	SC	SAMEA2003895	GCA_001258575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/575/GCA_001258575.1_8289_7_73	-	85516
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.01244	68.3	-	CIAW01	74	7227	6762	4/21/15	3/26/17	Scaffold	SC	SAMEA1483599	GCA_001320645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/645/GCA_001320645.1_7910_5_5	-	48
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.01996	47.5	-	CWRN01	48	3813	3665	7/16/15	3/26/17	Scaffold	SC	SAMEA889304	GCA_001260335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/335/GCA_001260335.1_5174_5_6	-	4339
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.44835	29	-	FAEK01	1438	4196	3939	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664200	GCA_900012935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/935/GCA_900012935.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.07012	45.3	-	MIVG01	110	4795	4634	9/15/16	3/21/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368340	GCA_001728725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/725/GCA_001728725.1_ASM172872v1	-	CDC_K5635
Klebsiella pneumoniae	573	PRJNA379388	379388	Proteobacteria	Gammaproteobacteria	5.58462	57.2	-	NCVU01	211	5541	5254	4/28/17	5/3/17	Scaffold	Institute for Cellular and Intracellular Symbiosis	SAMN06606879	GCA_002114225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/225/GCA_002114225.1_ASM211422v1	-	ICIS-278_PBV
Enterococcus faecium	1352	PRJEB18536	356851	Terrabacteria group	Firmicutes	2.98613	38.2	-	FRYE01	945	2923	2653	12/9/16	4/10/17	Scaffold	Moscow	SAMEA23860918	GCA_900148615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/615/GCA_900148615.1_Hp_6-9_05	-	-
Bordetella pertussis B200	1458277	PRJNA237095	237095	Proteobacteria	Betaproteobacteria	4.12016	67.7	-	JGWE01	207	4327	4252	5/1/14	5/1/14	Contig	JCVI	SAMN02614590	GCA_000662235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/235/GCA_000662235.1_gbp24v01	-	B200
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.77056	31.2	-	FBNI01	38	1850	1753	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683436	GCA_001497055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/055/GCA_001497055.1_NCTC12568	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.83018	64.2	-	CSXQ01	58	4866	4703	3/24/15	3/18/17	Scaffold	SC	SAMEA1464965	GCA_001214445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/445/GCA_001214445.1_7396_8_62	-	PAP110
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16907	64.1	-	CSWJ01	31	5262	5079	3/24/15	4/10/17	Scaffold	SC	SAMEA1464959	GCA_001214465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/465/GCA_001214465.1_7396_7_36	-	PAP084
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66048	31.4	-	FBJU01	28	1712	1618	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683320	GCA_001497075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/075/GCA_001497075.1_CCN64	-	n/a
Bordetella pertussis 18323	568706	PRJNA231221	231221	Proteobacteria	Betaproteobacteria	4.13524	67.7	-	LRIH01	4	3942	3030	1/22/16	1/22/16	Contig	US Food and Drug Administration 	SAMN03996251	GCA_001525555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/525/555/GCA_001525555.1_ASM152555v1	-	18323
Enterococcus faecium	1352	PRJEB18536	356851	Terrabacteria group	Firmicutes	2.98342	38.3	-	FRXZ01	540	2982	2728	12/9/16	3/28/17	Scaffold	Moscow	SAMEA23862418	GCA_900148635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/635/GCA_900148635.1_Hp_7-6_05	-	-
Klebsiella pneumoniae	573	PRJNA376414	376414	Proteobacteria	Gammaproteobacteria	5.75067	57.1	-	NCTN01	4	5814	5387	5/18/17	5/24/17	Scaffold	Houston Methodist Hospital	SAMN06437093	GCA_002148835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/835/GCA_002148835.1_ASM214883v1	-	KPN11
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.14432	45.3	-	MIVH01	125	4925	4741	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN03358838	GCA_001728745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/745/GCA_001728745.1_ASM172874v1	-	CDC_K5638
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.23571	28.9	-	FAEN01	1250	3830	3641	3/31/16	4/10/17	Contig	UNIVERSITE LAVAL	SAMEA3664201	GCA_900012945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/945/GCA_900012945.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.03475	47.9	-	CWRF01	117	3859	3194	7/16/15	3/26/17	Scaffold	SC	SAMEA889151	GCA_001260695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/695/GCA_001260695.1_4370_3_11	-	7684
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.05823	68.2	-	CFVW01	67	7283	6792	3/15/15	3/26/17	Scaffold	SC	SAMEA1483600	GCA_001320685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/685/GCA_001320685.1_7910_5_24	-	27/96
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.70878	50.7	-	CXMS01	452	5356	4520	7/16/15	2/24/17	Scaffold	SC	SAMEA2057989	GCA_001258595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/595/GCA_001258595.1_9870_6_21	-	143560
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.03214	41.2	-	FIHO01	24	2023	1923	2/10/16	3/19/17	Contig	SC	SAMEA1316677	GCA_900059895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/895/GCA_900059895.1_7114_5_63	-	LSS63
Streptococcus agalactiae serogroup III	216495	PRJNA324749	324749	Terrabacteria group	Firmicutes	2.13997	35.4	-	MCQS01	54	2184	2050	11/17/16	3/20/17	Contig	GSK Vaccines	SAMN05213957	GCA_001880585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/585/GCA_001880585.1_ASM188058v1	27574519	GZ12
Acinetobacter baumannii 24845_10	1310864	PRJNA194941	194941	Proteobacteria	Gammaproteobacteria	4.07061	39.1	-	JFWN01	75	4024	3649	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570310	GCA_000588975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/975/GCA_000588975.1_ASM58897v1	-	24845_10
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.45812	66.5	-	CCOR01	64	6177	6008	9/6/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2732177	GCA_000824205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/205/GCA_000824205.1_LES_CF_sputum_CF03_contigs_28_a1	-	Liverpool Epidemic Strain
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.18004	51.5	-	FEZW01	104	2531	2159	2/9/16	3/21/17	Scaffold	SC	SAMEA2674220	GCA_900029085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/085/GCA_900029085.1_14555_5_40	-	2842STDY5881381
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.64072	38.9	-	FLPY01	93	1619	1481	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA4000261	GCA_900088185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/185/GCA_900088185.1_STT-1-1-3-Cm	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10175	39.6	-	CKSH01	52	2303	2047	3/21/15	3/11/17	Contig	SC	SAMEA1025486	GCA_001104425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/425/GCA_001104425.1_6807_3_18	-	SMRU1626
Escherichia coli 96.0932	1005413	PRJNA65623	65623	Proteobacteria	Gammaproteobacteria	5.2774	50.3	-	ANLW01	359	5650	5197	12/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN01041347	GCA_000316805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/805/GCA_000316805.2_ASM31680v2	-	96.0932
Mycobacterium tuberculosis NRITLD54	1455273	PRJNA237395	237395	Terrabacteria group	Actinobacteria	4.33546	65.4	-	JJSY01	166	4368	4052	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628488	GCA_000657235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/235/GCA_000657235.1_Myco_tube_NRITLD54_V1	-	NRITLD54
Listeria monocytogenes	1639	PRJEB10738	310469	Terrabacteria group	Firmicutes	3.04768	37.9	-	CYUY01	16	3112	3052	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540842	GCA_001564655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/655/GCA_001564655.1_LM06-00727_assembly	-	LM06-00727
Campylobacter jejuni	197	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.73999	30.3	-	FBJN01	52	1879	1765	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683313	GCA_001489095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/489/095/GCA_001489095.1_CCN25	-	n/a
Salmonella enterica subsp. enterica serovar Newport str. CVM 19567	796735	PRJNA49625	49625	Proteobacteria	Gammaproteobacteria	4.66384	52.2	-	AHTR01	40	4714	4508	6/25/12	5/19/17	Contig	FDA	SAMN00811536	GCA_000272595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/595/GCA_000272595.1_ASM27259v1	-	CVM 19567
Staphylococcus aureus M1427	1402619	PRJNA219969	219969	Terrabacteria group	Firmicutes	2.92753	32.9	-	JAXL01	13	3080	2901	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02360776	GCA_000532555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/555/GCA_000532555.1_Stap_aure_M1427_V1	-	M1427
Staphylococcus aureus M1439	1402620	PRJNA219970	219970	Terrabacteria group	Firmicutes	2.91733	33.1	-	JAXK01	22	3018	2856	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02360777	GCA_000532575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/575/GCA_000532575.1_Stap_aure_M1439_V1	-	M1439
Salmonella enterica subsp. enterica serovar Newport str. CVM 35202	796734	PRJNA49627	49627	Proteobacteria	Gammaproteobacteria	4.95526	52.2	-	AHTS01	63	5091	4837	6/25/12	5/19/17	Contig	FDA	SAMN01813480	GCA_000272615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/615/GCA_000272615.1_ASM27261v1	-	CVM 35202
Campylobacter jejuni	197	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.63286	30.4	-	FBFY01	34	1709	1579	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683219	GCA_001490635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/490/635/GCA_001490635.1_998	-	n/a
Listeria monocytogenes	1639	PRJEB10739	310470	Terrabacteria group	Firmicutes	2.92876	37.8	-	CYVA01	33	2945	2878	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540843	GCA_001564675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/675/GCA_001564675.1_LM06-00918_assembly	-	LM06-00918
Mycobacterium tuberculosis NRITLD55	1455274	PRJNA237396	237396	Terrabacteria group	Actinobacteria	4.36741	65.5	-	JJSX01	86	4325	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628489	GCA_000657255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/255/GCA_000657255.1_Myco_tube_NRITLD55_V1	-	NRITLD55
Escherichia coli 96.0427	1005411	PRJNA65619	65619	Proteobacteria	Gammaproteobacteria	5.33616	50.3	-	ANLU01	494	5749	5319	12/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN01041345	GCA_000316825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/825/GCA_000316825.2_ASM31682v2	-	96.0427
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.15854	39.6	-	CMPF01	78	2373	2155	3/22/15	3/11/17	Contig	SC	SAMEA2061721	GCA_001104445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/445/GCA_001104445.1_9803_7_55	-	6A
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63359	38.9	-	FLPZ01	59	1628	1490	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA4000264	GCA_900088195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/195/GCA_900088195.1_STT-1-1-10-Cm	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.1224	51.8	-	FFBC01	88	2494	2171	2/9/16	3/19/17	Scaffold	SC	SAMEA2674284	GCA_900029095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/095/GCA_900029095.1_14555_5_72	-	2842STDY5881413
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.45747	66.5	-	CCOT01	60	6175	6008	9/6/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2732178	GCA_000824225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/225/GCA_000824225.1_LES_CF_sputum_CF03_contigs_29_a1	-	Liverpool Epidemic Strain
Acinetobacter baumannii 24845_5	1310859	PRJNA194936	194936	Proteobacteria	Gammaproteobacteria	4.10656	39.2	-	JFWJ01	93	4080	3820	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570314	GCA_000588995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/995/GCA_000588995.1_ASM58899v1	-	24845_5
Streptococcus agalactiae serogroup III	216495	PRJNA324749	324749	Terrabacteria group	Firmicutes	2.15627	35.5	-	MCQU01	44	2205	2074	11/17/16	3/20/17	Contig	GSK Vaccines	SAMN05213959	GCA_001880605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/605/GCA_001880605.1_ASM188060v1	27574519	GZ14
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05952	41.1	-	FINH01	25	2077	1949	2/10/16	3/19/17	Contig	SC	SAMEA1566029	GCA_900059905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/905/GCA_900059905.1_8337_6_30	-	BM357B
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.71953	50.7	-	CXAH01	387	5293	4566	7/17/15	2/24/17	Scaffold	SC	SAMEA2445769	GCA_001258615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/615/GCA_001258615.1_12971_8_77	-	H140740645
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08266	68.2	-	CIAU01	72	7292	6798	4/21/15	3/26/17	Scaffold	SC	SAMEA1483601	GCA_001320725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/725/GCA_001320725.1_7910_5_13	-	4090-0390
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.01286	47.5	-	CWOU01	97	3822	3504	7/16/15	3/26/17	Scaffold	SC	SAMEA889340	GCA_001260915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/915/GCA_001260915.1_4056_5_2	-	A66
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.06771	28.5	-	FAEJ01	702	3816	3639	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664203	GCA_900012955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/955/GCA_900012955.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.15759	45.2	-	MIVI01	93	4908	4744	9/15/16	3/20/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN03358839	GCA_001728755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/755/GCA_001728755.1_ASM172875v1	-	CDC_K5701
Klebsiella pneumoniae	573	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	5.76607	56.8	-	NIDM01	120	5934	5601	6/29/17	7/1/17	Scaffold	SRCAMB	SAMN07179228	GCA_002211125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/125/GCA_002211125.1_ASM221112v1	-	SCPM-O-B-7851 (KPI-3014)
Enterococcus faecium	1352	PRJEB18536	356851	Terrabacteria group	Firmicutes	2.82715	38.1	-	FRXT01	221	3000	2657	12/9/16	3/28/17	Scaffold	Moscow	SAMEA23864668	GCA_900148665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/665/GCA_900148665.1_Hp_21-21_05	-	-
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.5916	67.3	-	CSML01	1263	3618	3565	3/23/15	6/13/15	Scaffold	SC	SAMEA751503	GCA_001192115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/115/GCA_001192115.1_5601_8_2	-	B265
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.72843	31.3	-	FBOJ01	78	1760	1634	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683443	GCA_001497095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/095/GCA_001497095.1_H054340287	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15058	64.1	-	CSYE01	23	5259	5060	3/24/15	3/18/17	Scaffold	SC	SAMEA1464860	GCA_001214505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/505/GCA_001214505.1_7396_8_76	-	PAP124
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15907	64.1	-	CSXW01	33	5268	5075	3/24/15	3/18/17	Scaffold	SC	SAMEA1464879	GCA_001214525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/525/GCA_001214525.1_7396_8_68	-	PAP116
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.78351	31.1	-	FBIZ01	97	1821	1676	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683299	GCA_001497115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/115/GCA_001497115.1_NCTC13006	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.63357	67	-	CSQZ01	968	3666	3620	3/22/15	6/13/15	Scaffold	SC	SAMEA1931867	GCA_001192135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/135/GCA_001192135.1_5463_3_7	-	B174
Enterococcus faecium	1352	PRJEB18536	356851	Terrabacteria group	Firmicutes	3.16249	38	-	FRYB01	757	3078	2747	12/9/16	3/28/17	Scaffold	Moscow	SAMEA23863918	GCA_900148675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/675/GCA_900148675.1_Hp_21-11_05	-	-
Klebsiella pneumoniae	573	PRJNA394803	394803	Proteobacteria	Gammaproteobacteria	5.86879	56.7	-	NNCC01	154	5997	5691	8/14/17	8/16/17	Scaffold	"Austrian Agency for Health and Food Safety, Vienna, Austria"	SAMN07360887	GCA_002250985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/985/GCA_002250985.1_ASM225098v1	-	D3-2b-17
Vibrio parahaemolyticus	670	PRJNA324078	324078	Proteobacteria	Gammaproteobacteria	5.32062	45.1	-	MBDQ01	54	5140	4910	10/28/16	3/20/17	Contig	Texas A&M University - Corpus Christi	SAMN05194681	GCA_001856035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/035/GCA_001856035.1_ASM185603v1	-	06-043
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.71199	29.1	-	FAEO01	1182	4389	4151	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664204	GCA_900012975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/975/GCA_900012975.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.99684	47.4	-	CWSD01	62	3800	3657	7/16/15	3/26/17	Scaffold	SC	SAMEA889373	GCA_001260995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/995/GCA_001260995.1_5174_7_10	-	A27
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.01171	68.3	-	CFVM01	69	7232	6766	3/15/15	3/26/17	Scaffold	SC	SAMEA1483604	GCA_001320755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/755/GCA_001320755.1_7910_5_33	-	33
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.82517	50.7	-	CWWM01	407	5410	4634	7/16/15	2/24/17	Scaffold	SC	SAMEA3345104	GCA_001258635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/635/GCA_001258635.1_Sg_201405357_CTATAC_L001	-	201405357_1
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.09521	41.1	-	FINU01	22	2113	2012	2/10/16	3/19/17	Contig	SC	SAMEA1566019	GCA_900059915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/915/GCA_900059915.1_8337_6_42	-	BM460
Streptococcus agalactiae serogroup III	216495	PRJNA324749	324749	Terrabacteria group	Firmicutes	2.11661	35.4	-	MCQW01	43	2158	2032	11/17/16	3/20/17	Contig	GSK Vaccines	SAMN05213961	GCA_001880615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/615/GCA_001880615.1_ASM188061v1	27574519	GZ20
Acinetobacter baumannii 24845_3	1310857	PRJNA194934	194934	Proteobacteria	Gammaproteobacteria	4.07799	39.1	-	JFWL01	90	4059	3792	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570312	GCA_000589015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/015/GCA_000589015.1_ASM58901v1	-	24845_3
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.48529	66.4	-	CCOU01	65	6196	6023	9/5/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2732179	GCA_000824245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/245/GCA_000824245.1_LES_CF_sputum_CF03_contigs_31_a1	-	Liverpool Epidemic Strain
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12953	51.7	-	FFBR01	81	2493	2165	2/9/16	3/19/17	Scaffold	SC	SAMEA2674314	GCA_900029105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/105/GCA_900029105.1_14555_5_87	-	2842STDY5881428
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.65701	39	-	FLQI01	141	1628	1486	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA4000263	GCA_900088205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/205/GCA_900088205.1_STT-1-1-5-Cm	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.98356	39.7	-	CNRP02	117	2184	1973	3/23/15	3/11/17	Contig	SC	SAMEA1032554	GCA_001104585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/585/GCA_001104585.2_6999_2_11	-	R34-3217
Escherichia coli 95.0183	1005406	PRJNA65609	65609	Proteobacteria	Gammaproteobacteria	5.41092	50.3	-	ANLQ01	433	5926	5392	12/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN01041340	GCA_000316845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/845/GCA_000316845.2_ASM31684v2	-	95.0183
Mycobacterium tuberculosis NRITLD56	1455275	PRJNA237397	237397	Terrabacteria group	Actinobacteria	4.35151	65.5	-	JJSW01	104	4331	4105	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628490	GCA_000657275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/275/GCA_000657275.1_Myco_tube_NRITLD56_V1	-	NRITLD56
Listeria monocytogenes	1639	PRJEB10740	310471	Terrabacteria group	Firmicutes	2.85266	37.8	-	CYVB01	26	2864	2798	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540844	GCA_001564695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/695/GCA_001564695.1_LM06-00983_assembly	-	LM06-00983
Campylobacter jejuni	197	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68551	30.4	-	FBIA01	56	1773	1632	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683272	GCA_001491455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/455/GCA_001491455.1_BRIS982B	-	n/a
Salmonella enterica subsp. enterica serovar Newport str. CVM 35199	789643	PRJNA49409	49409	Proteobacteria	Gammaproteobacteria	4.74736	52.1	-	AHTK01	57	4835	4597	6/25/12	5/19/17	Contig	FDA	SAMN00811534	GCA_000272635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/635/GCA_000272635.1_ASM27263v1	-	CVM 35199
Staphylococcus aureus M1440	1402621	PRJNA219971	219971	Terrabacteria group	Firmicutes	2.98511	33.1	-	JAXJ01	34	3137	2941	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02360778	GCA_000532595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/595/GCA_000532595.1_Stap_aure_M1440_V1	-	M1440
Staphylococcus aureus M1442	1402622	PRJNA219972	219972	Terrabacteria group	Firmicutes	2.94177	32.9	-	JAXI01	26	3084	2890	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02360779	GCA_000532615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/615/GCA_000532615.1_Stap_aure_M1442_V1	-	M1442
Salmonella enterica subsp. enterica serovar Newport str. CVM 21539	789644	PRJNA49411	49411	Proteobacteria	Gammaproteobacteria	4.71186	52.1	-	AHTL01	57	4764	4540	6/25/12	5/19/17	Contig	FDA	SAMN00811535	GCA_000272655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/655/GCA_000272655.1_ASM27265v1	-	CVM 21539
Campylobacter jejuni	197	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.80713	30.1	-	FBIT01	117	1924	1750	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683292	GCA_001491675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/675/GCA_001491675.1_CCN4	-	n/a
Listeria monocytogenes	1639	PRJEB10741	310472	Terrabacteria group	Firmicutes	2.8697	37.9	-	CYVC01	34	2889	2819	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540845	GCA_001564715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/715/GCA_001564715.1_LM06-01023_assembly	-	LM06-01023
Mycobacterium tuberculosis NRITLD57	1455276	PRJNA237398	237398	Terrabacteria group	Actinobacteria	4.39403	65.6	-	JJSV01	38	4276	4093	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628491	GCA_000657295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/295/GCA_000657295.1_Myco_tube_NRITLD57_V1	-	NRITLD57
Escherichia coli 95.1288	1005407	PRJNA65611	65611	Proteobacteria	Gammaproteobacteria	5.18891	50.3	-	ANLR01	578	5552	5091	12/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN01041342	GCA_000316865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/865/GCA_000316865.2_ASM31686v2	-	95.1288
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00443	39.7	-	CODH02	119	2174	1970	3/23/15	3/11/17	Contig	SC	SAMEA1463100	GCA_001104605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/605/GCA_001104605.2_7622_4_15	-	LE4030
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63336	38.9	-	FLQE01	63	1621	1487	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA4000265	GCA_900088215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/215/GCA_900088215.1_STT-1-1-11-Cm	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11736	51.7	-	FFDE01	65	2476	2144	2/9/16	3/19/17	Scaffold	SC	SAMEA2674217	GCA_900029115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/115/GCA_900029115.1_14555_6_32	-	2842STDY5881469
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.45707	66.5	-	CCOV01	65	6177	6007	9/6/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2732180	GCA_000824265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/265/GCA_000824265.1_LES_CF_sputum_CF03_contigs_32_a1	-	Liverpool Epidemic Strain
Acinetobacter baumannii 24845_4	1310858	PRJNA194935	194935	Proteobacteria	Gammaproteobacteria	4.08311	39.1	-	JFWK01	95	4079	3780	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570313	GCA_000589035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/035/GCA_000589035.1_ASM58903v1	-	24845_4
Streptococcus agalactiae serogroup III	216495	PRJNA324749	324749	Terrabacteria group	Firmicutes	2.19431	35.5	-	MCQJ01	41	2244	2127	11/17/16	3/20/17	Contig	GSK Vaccines	SAMN05213948	GCA_001880625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/625/GCA_001880625.1_ASM188062v1	27574519	CH-1
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04219	41.2	-	FIPB01	20	2047	1929	2/10/16	3/19/17	Contig	SC	SAMEA1566129	GCA_900059925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/925/GCA_900059925.1_8337_6_76	-	EN508
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.74258	50.7	-	CXMZ01	399	5387	4569	7/17/15	2/24/17	Scaffold	SC	SAMEA2055833	GCA_001258655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/655/GCA_001258655.1_9870_6_37	-	143981
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.00893	68.3	-	CFVN01	74	7231	6765	3/15/15	3/26/17	Scaffold	SC	SAMEA1483605	GCA_001320795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/795/GCA_001320795.1_7910_5_29	-	10
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.02713	47.5	-	CWQM01	54	3810	3593	7/16/15	3/26/17	Scaffold	SC	SAMEA889195	GCA_001261075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/075/GCA_001261075.1_4075_3_9	-	PRL64
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	3.97867	28.6	-	FAEP01	1376	3619	3339	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664205	GCA_900012985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/985/GCA_900012985.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA328962	328962	Proteobacteria	Gammaproteobacteria	5.15191	45.3	-	MBFI01	193	4944	4752	10/28/16	3/20/17	Contig	"CIAD, A.C."	SAMN05386387	GCA_001856105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/105/GCA_001856105.1_ASM185610v1	-	CAIM 1772
Klebsiella pneumoniae	573	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	5.6314	57	-	NPJW01	115	5732	5454	8/22/17	8/22/17	Scaffold	SRCAMB	SAMN07179229	GCA_002263345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/345/GCA_002263345.1_ASM226334v1	-	SCPM-O-B-7954 (KPB-417/16)
Enterococcus faecium	1352	PRJEB18536	356851	Terrabacteria group	Firmicutes	2.77834	38	-	FRYD01	384	2903	2562	12/9/16	3/28/17	Scaffold	Moscow	SAMEA23866918	GCA_900148685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/685/GCA_900148685.1_Hp_23-9_05	-	-
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.57737	67.1	-	CSNG01	1194	3590	3541	3/22/15	6/13/15	Scaffold	SC	SAMEA1933033	GCA_001197335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/335/GCA_001197335.1_5463_3_2	-	B153
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68808	31.3	-	FBIQ01	30	1756	1664	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683288	GCA_001497135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/135/GCA_001497135.1_CCN72	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.83866	64.2	-	CSWG01	59	4863	4708	3/24/15	3/18/17	Scaffold	SC	SAMEA1464962	GCA_001214565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/565/GCA_001214565.1_7396_7_3	-	PAP051
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18371	64.2	-	CSYM01	40	5198	5030	3/24/15	3/18/17	Scaffold	SC	SAMEA1464917	GCA_001214585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/585/GCA_001214585.1_7396_8_85	-	PAP133
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.58502	31.7	-	FBNU01	21	1604	1531	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683407	GCA_001497155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/155/GCA_001497155.1_H081380695a	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.56831	67.3	-	CSRO01	1516	3627	3576	3/23/15	6/13/15	Scaffold	SC	SAMEA751146	GCA_001198355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/355/GCA_001198355.1_6062_3_4	-	B065
Enterococcus faecium	1352	PRJEB18536	356851	Terrabacteria group	Firmicutes	2.69017	38.3	-	FRXP01	147	2722	2497	12/9/16	3/28/17	Scaffold	Moscow	SAMEA23866168	GCA_900148705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/705/GCA_900148705.1_Hp_22-12_05	-	-
Klebsiella pneumoniae	573	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	5.65236	57	-	NPII01	110	5764	5430	8/22/17	8/24/17	Scaffold	SRCAMB	SAMN07179230	GCA_002263375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/375/GCA_002263375.1_ASM226337v1	-	SCPM-O-B-8045 (KPB-1470/16)
Vibrio parahaemolyticus	670	PRJNA350230	350230	Proteobacteria	Gammaproteobacteria	5.03404	45.3	-	MORW01	33	4866	4655	12/9/16	3/20/17	Contig	Guangdong CDC	SAMN05935522	GCA_001895505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/505/GCA_001895505.1_ASM189550v1	-	100135
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.24565	29	-	FAER01	1420	3847	3621	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664207	GCA_900013005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/005/GCA_900013005.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.87136	48	-	CWQU01	180	3595	3208	7/16/15	4/10/17	Scaffold	SC	SAMEA889201	GCA_001261335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/335/GCA_001261335.1_4075_3_11	-	GP60
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08397	68.2	-	CIHR01	56	7307	6791	4/21/15	3/27/17	Scaffold	SC	SAMEA806989	GCA_001320825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/825/GCA_001320825.1_7909_4_4	-	C37
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.74213	50.6	-	CWXS01	456	5509	4472	7/16/15	2/24/17	Scaffold	SC	SAMEA2434370	GCA_001258675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/675/GCA_001258675.1_12850_1_43	-	KY 1243
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.0534	41.2	-	FIPM01	17	2064	1952	2/10/16	3/19/17	Contig	SC	SAMEA1566153	GCA_900060135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/135/GCA_900060135.1_8525_5_25	-	SS20
Streptococcus agalactiae serogroup III	216495	PRJNA324749	324749	Terrabacteria group	Firmicutes	2.1059	35.4	-	MCQK01	40	2143	2013	11/17/16	3/20/17	Contig	GSK Vaccines	SAMN05213949	GCA_001880665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/665/GCA_001880665.1_ASM188066v1	27574519	CH-2
Acinetobacter baumannii 24845_9	1310863	PRJNA194940	194940	Proteobacteria	Gammaproteobacteria	4.25807	39.1	-	JFWF01	289	4260	3933	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570319	GCA_000589055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/055/GCA_000589055.1_ASM58905v1	-	24845_9
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.45683	66.5	-	CCOW01	63	6179	6004	9/6/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2732181	GCA_000824285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/285/GCA_000824285.1_LES_CF_sputum_CF03_contigs_33_a1	-	Liverpool Epidemic Strain
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15725	51.6	-	FEQM01	76	2515	2154	2/9/16	3/21/17	Scaffold	SC	SAMEA2674554	GCA_900029225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/225/GCA_900029225.1_14355_7_88	-	2842STDY5881717
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.65028	39	-	FLQK01	108	1626	1483	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA4000262	GCA_900088225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/225/GCA_900088225.1_STT-1-1-4-Cm	-	-
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09541	39.7	-	CMGP01	52	2313	2091	3/23/15	3/11/17	Contig	SC	SAMEA1029251	GCA_001104625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/625/GCA_001104625.1_7038_4_7	-	SMRU2935
Escherichia coli 95.0943	1005408	PRJNA65613	65613	Proteobacteria	Gammaproteobacteria	5.37596	50.3	-	ANLS01	389	5779	5320	12/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN01041341	GCA_000316885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/885/GCA_000316885.2_ASM31688v2	-	95.0943
Mycobacterium tuberculosis NRITLD59	1455278	PRJNA237400	237400	Terrabacteria group	Actinobacteria	4.41727	65.5	-	JJSU01	57	4334	4117	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628493	GCA_000657315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/315/GCA_000657315.1_Myco_tube_NRITLD59_V1	-	NRITLD59
Listeria monocytogenes	1639	PRJEB10742	310473	Terrabacteria group	Firmicutes	2.91721	37.9	-	CYVD01	17	2976	2896	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540846	GCA_001564735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/735/GCA_001564735.1_LM06-01244_assembly	-	LM06-01244
Campylobacter jejuni	197	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.73246	30.3	-	FBML01	31	1864	1758	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683390	GCA_001494015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/015/GCA_001494015.1_CCN190	-	n/a
Salmonella enterica subsp. enterica serovar Newport str. CVM 33953	789645	PRJNA49413	49413	Proteobacteria	Gammaproteobacteria	4.79828	52.2	-	AHTM01	68	4898	4667	6/25/12	5/19/17	Contig	FDA	SAMN01765622	GCA_000272675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/675/GCA_000272675.1_ASM27267v1	22933769	CVM 33953
Staphylococcus aureus M1114	1402631	PRJNA219981	219981	Terrabacteria group	Firmicutes	2.86158	32.8	-	JAXH01	13	3001	2842	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02360788	GCA_000532635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/635/GCA_000532635.1_Stap_aure_M1114_V1	-	M1114
Staphylococcus aureus M1125	1402640	PRJNA219990	219990	Terrabacteria group	Firmicutes	2.91856	32.9	-	JAXG01	27	3049	2877	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02360797	GCA_000532655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/655/GCA_000532655.1_Stap_aure_M1125_V1	-	M1125
Salmonella enterica subsp. enterica serovar Newport str. CVM 19449	796736	PRJNA49623	49623	Proteobacteria	Gammaproteobacteria	4.69607	52.1	-	AHTQ01	64	4761	4535	6/25/12	5/19/17	Contig	FDA	SAMN01813413	GCA_000272695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/695/GCA_000272695.1_ASM27269v1	-	CVM 19449
Campylobacter jejuni	197	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.64326	30.3	-	FBHX01	29	1713	1595	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683273	GCA_001494515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/494/515/GCA_001494515.1_CCN27	-	n/a
Listeria monocytogenes	1639	PRJEB10743	310474	Terrabacteria group	Firmicutes	2.94599	37.9	-	CYVE01	28	2967	2900	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540847	GCA_001564755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/755/GCA_001564755.1_LM06-01598_assembly	-	LM06-01598
Mycobacterium tuberculosis NRITLD60	1455279	PRJNA237401	237401	Terrabacteria group	Actinobacteria	4.44411	65.6	-	JJST01	68	4372	4174	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628494	GCA_000657335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/335/GCA_000657335.1_Myco_tube_NRITLD60_V1	-	NRITLD60
Escherichia coli 96.0428	1005410	PRJNA65617	65617	Proteobacteria	Gammaproteobacteria	5.21146	50.3	-	ANLT01	293	5548	5142	12/4/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN01041346	GCA_000316905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/905/GCA_000316905.2_ASM31690v2	-	96.0428
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05581	39.7	-	CNTO02	185	2246	2010	3/22/15	3/11/17	Contig	SC	SAMEA1032422	GCA_001104665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/665/GCA_001104665.2_6999_4_21	-	142534
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.6359	38.9	-	FLQJ01	75	1623	1485	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA4000267	GCA_900088235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/235/GCA_900088235.1_STT-1-1-13-Cm	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.20199	51.5	-	FETG01	87	2582	2204	2/9/16	3/21/17	Scaffold	SC	SAMEA2673957	GCA_900029235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/235/GCA_900029235.1_14355_5_58	-	2842STDY5881111
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.45632	66.5	-	CCOY01	68	6178	6002	9/5/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2732182	GCA_000824305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/305/GCA_000824305.1_LES_CF_sputum_CF03_contigs_35_a1	-	Liverpool Epidemic Strain
Acinetobacter baumannii 25307_6	1310870	PRJNA194947	194947	Proteobacteria	Gammaproteobacteria	4.02141	39.3	-	JFVS01	98	3960	3703	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570333	GCA_000589075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/075/GCA_000589075.1_ASM58907v1	-	25307_6
Streptococcus agalactiae serogroup III	216495	PRJNA324749	324749	Terrabacteria group	Firmicutes	1.9382	35.5	-	MCQL01	25	2007	1887	11/17/16	3/20/17	Contig	GSK Vaccines	SAMN05213950	GCA_001880675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/675/GCA_001880675.1_ASM188067v1	27574519	CS01
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.08693	41.1	-	FIQV01	19	2118	2004	2/10/16	3/19/17	Contig	SC	SAMEA1566122	GCA_900060145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/145/GCA_900060145.1_8525_5_60	-	SS85
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.78112	50.7	-	CXJA01	390	5338	4619	7/16/15	2/24/17	Scaffold	SC	SAMEA2004852	GCA_001258695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/695/GCA_001258695.1_8289_7_86	-	87006
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08864	68.2	-	CFZT01	63	7302	6786	3/15/15	3/27/17	Scaffold	SC	SAMEA806991	GCA_001320865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/865/GCA_001320865.1_7909_4_28	-	C61
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.01888	47.5	-	CWSP01	49	3805	3661	7/16/15	3/26/17	Scaffold	SC	SAMEA889197	GCA_001261535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/535/GCA_001261535.1_5174_8_8	-	A487(1)
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.26514	28.8	-	FAFA01	1616	3938	3660	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664213	GCA_900013045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/045/GCA_900013045.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA350230	350230	Proteobacteria	Gammaproteobacteria	5.06757	45.3	-	MOSA01	40	4905	4687	12/9/16	3/20/17	Contig	Guangdong CDC	SAMN05935527	GCA_001895515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/515/GCA_001895515.1_ASM189551v1	-	100143
Klebsiella pneumoniae	573	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	5.73353	56.7	-	NPIJ01	171	5864	5500	8/22/17	8/24/17	Scaffold	SRCAMB	SAMN07179231	GCA_002263395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/395/GCA_002263395.1_ASM226339v1	-	SCPM-O-B-8044 (KPB-1617/16)
Enterococcus faecium	1352	PRJEB18536	356851	Terrabacteria group	Firmicutes	2.7935	38.1	-	FRXY01	440	2866	2575	12/9/16	4/10/17	Scaffold	Moscow	SAMEA23861668	GCA_900148715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/715/GCA_900148715.1_Hp_6-10_05	-	-
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.61719	67.4	-	CSQQ01	1288	3645	3594	3/23/15	6/13/15	Scaffold	SC	SAMEA751487	GCA_001201595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/595/GCA_001201595.1_5515_7_2	-	B137
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.72945	31.1	-	FBHY01	61	1742	1643	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683276	GCA_001497175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/175/GCA_001497175.1_SWAN408	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.88545	64.1	-	CSZY01	72	4906	4620	3/24/15	3/18/17	Scaffold	SC	SAMEA1317708	GCA_001214605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/605/GCA_001214605.1_7520_7_51	-	PAP171
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15847	64.1	-	CSWA01	16	5262	5083	3/24/15	3/18/17	Scaffold	SC	SAMEA1464853	GCA_001214645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/645/GCA_001214645.1_7396_7_24	-	PAP072
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.57607	31.8	-	FBKN01	24	1582	1514	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683333	GCA_001497195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/195/GCA_001497195.1_H093580324	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.54133	67.3	-	CSMW01	1578	3614	3565	3/22/15	6/13/15	Scaffold	SC	SAMEA751154	GCA_001202515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/515/GCA_001202515.1_6062_3_2	-	B051
Enterococcus faecium	1352	PRJEB18536	356851	Terrabacteria group	Firmicutes	2.92187	38.2	-	FRXV01	234	3027	2756	12/9/16	3/28/17	Scaffold	Moscow	SAMEA23863168	GCA_900148725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/725/GCA_900148725.1_Hp_7-8_05	-	-
Klebsiella pneumoniae	573	PRJNA398725	398725	Proteobacteria	Gammaproteobacteria	5.8461	56.8	-	NQYV01	843	6013	3097	9/4/17	9/4/17	Scaffold	Christian Medical College	SAMN07516032	GCA_002285215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/215/GCA_002285215.1_ASM228521v1	-	BA356
Vibrio parahaemolyticus	670	PRJNA350230	350230	Proteobacteria	Gammaproteobacteria	5.05722	45.3	-	MORX01	25	4900	4687	12/9/16	3/20/17	Contig	Guangdong CDC	SAMN05935523	GCA_001895615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/615/GCA_001895615.1_ASM189561v1	-	100136
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.27151	28.9	-	FAEV01	906	3921	3746	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664214	GCA_900013055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/055/GCA_900013055.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.02298	47.5	-	CWQP01	56	3810	3650	7/16/15	3/26/17	Scaffold	SC	SAMEA889242	GCA_001261555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/555/GCA_001261555.1_4370_2_3	-	6201
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08726	68.2	-	CGFU01	74	7312	6778	3/15/15	3/27/17	Scaffold	SC	SAMEA806994	GCA_001320905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/905/GCA_001320905.1_7907_5_6	-	C6
Shigella sonnei	624	PRJEB2460	204320	Proteobacteria	Gammaproteobacteria	4.8266	50.5	-	CXHA01	555	5457	4587	7/16/15	2/24/17	Scaffold	SC	SAMEA1027711	GCA_001258715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/715/GCA_001258715.1_7353_1_23	-	H113100099
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05805	41.1	-	FIRY01	23	2066	1962	2/10/16	3/19/17	Contig	SC	SAMEA1566115	GCA_900060155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/155/GCA_900060155.1_8525_5_88	-	VS3881
Streptococcus agalactiae serogroup III	216495	PRJNA324749	324749	Terrabacteria group	Firmicutes	2.20122	35.5	-	MCQM01	43	2270	2137	11/17/16	3/20/17	Contig	GSK Vaccines	SAMN05213951	GCA_001880685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/685/GCA_001880685.1_ASM188068v1	27574519	GZ01
Acinetobacter baumannii 25307_8	1310872	PRJNA194949	194949	Proteobacteria	Gammaproteobacteria	4.04088	39.2	-	JFVR01	122	3997	3718	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570334	GCA_000589095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/095/GCA_000589095.1_ASM58909v1	-	25307_8
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.45686	66.5	-	CCPB01	65	6176	6010	9/6/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2732183	GCA_000824325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/325/GCA_000824325.1_LES_CF_sputum_CF03_contigs_36_a1	-	Liverpool Epidemic Strain
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15666	51.6	-	FEWG01	68	2501	2169	2/9/16	3/19/17	Scaffold	SC	SAMEA2674154	GCA_900029245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/245/GCA_900029245.1_14324_4_72	-	2842STDY5881317
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.6349	38.9	-	FLPW01	62	1620	1486	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA4000268	GCA_900088245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/245/GCA_900088245.1_STT-1-1-14-Cm	-	-
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	1.99891	39.7	-	CPPS01	71	2159	1971	3/23/15	3/11/17	Contig	SC	SAMEA770001	GCA_001104725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/725/GCA_001104725.1_5242_3_4	-	23F/4
Escherichia coli LCT-EC59	1258580	PRJNA179371	179371	Proteobacteria	Gammaproteobacteria	5.22178	50.3	-	ANHV01	33	5312	4957	12/5/12	5/18/17	Scaffold	Beijing Genomics Institute	SAMN02469330	GCA_000317395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/317/395/GCA_000317395.1_genome_assembly_of_LCT-EC59_strain_of_E.coli	23469355	LCT-EC59
Mycobacterium tuberculosis NRITLD09	1455283	PRJNA237405	237405	Terrabacteria group	Actinobacteria	4.36214	65.5	-	JJSS01	182	4380	4091	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628498	GCA_000657355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/355/GCA_000657355.1_Myco_tube_NRITLD09_V1	-	NRITLD09
Listeria monocytogenes	1639	PRJEB10745	310475	Terrabacteria group	Firmicutes	3.08552	37.7	-	CYVF01	18	3155	3086	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540848	GCA_001564775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/775/GCA_001564775.1_LM06-01614_assembly	-	LM06-01614
Campylobacter jejuni	197	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.64829	30.3	-	FBIF01	37	1714	1594	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683281	GCA_001496075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/075/GCA_001496075.1_CCN29	-	n/a
Salmonella enterica subsp. enterica serovar Newport str. CVM 19536	859196	PRJNA50017	50017	Proteobacteria	Gammaproteobacteria	4.64881	52.2	-	AHUF01	62	4760	4512	6/25/12	5/19/17	Contig	FDA	SAMN01813414	GCA_000272855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/855/GCA_000272855.1_ASM27285v1	-	CVM 19536
Staphylococcus aureus M1131	1402645	PRJNA219995	219995	Terrabacteria group	Firmicutes	2.88502	32.9	-	JAXF01	12	3020	2855	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02360802	GCA_000532675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/675/GCA_000532675.1_Stap_aure_M1131_V1	-	M1131
Staphylococcus aureus M1134	1402647	PRJNA219997	219997	Terrabacteria group	Firmicutes	2.89637	32.9	-	JAXE01	25	3057	2884	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02360804	GCA_000532695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/695/GCA_000532695.1_Stap_aure_M1134_V1	-	M1134
Salmonella enterica subsp. enterica serovar Newport str. CVM 4176	859197	PRJNA50019	50019	Proteobacteria	Gammaproteobacteria	4.93591	52	-	AHUG01	54	5099	4776	6/25/12	5/19/17	Contig	FDA	SAMN01813415	GCA_000272875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/875/GCA_000272875.1_ASM27287v1	-	CVM 4176
Campylobacter jejuni	197	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.70409	30.4	-	FBFV01	30	1787	1693	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683218	GCA_001498975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/975/GCA_001498975.1_I7C1	-	n/a
Listeria monocytogenes	1639	PRJEB10746	310476	Terrabacteria group	Firmicutes	2.90008	37.9	-	CYVH01	15	2930	2875	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540849	GCA_001564795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/795/GCA_001564795.1_LM07-00514_assembly	-	LM07-00514
Mycobacterium tuberculosis NRITLD10	1455284	PRJNA237406	237406	Terrabacteria group	Actinobacteria	4.38753	65.6	-	JJSR01	89	4314	4099	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628499	GCA_000657375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/375/GCA_000657375.1_Myco_tube_NRITLD10_V1	-	NRITLD10
Escherichia coli 96.0109	1005414	PRJNA65625	65625	Proteobacteria	Gammaproteobacteria	5.36848	50.3	-	ANLX01	568	5821	5359	12/10/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN01041344	GCA_000318425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/425/GCA_000318425.2_ASM31842v2	-	96.0109
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.19698	39.5	-	CMQQ01	45	2443	2200	3/23/15	3/11/17	Contig	SC	SAMEA2061955	GCA_001104745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/745/GCA_001104745.1_9803_8_17	-	23F
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63612	38.9	-	FLPX01	76	1621	1487	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA4000266	GCA_900088255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/255/GCA_900088255.1_STT-1-1-12-Cm	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.24317	51.4	-	FEXD01	108	2621	2228	2/9/16	3/21/17	Scaffold	SC	SAMEA2674367	GCA_900029255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/255/GCA_900029255.1_14324_5_30	-	2842STDY5881563
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.45723	66.5	-	CCPE01	60	6173	6005	9/5/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2732221	GCA_000824345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/345/GCA_000824345.1_LES_CF_sputum_CF03_contigs_38_a1	-	Liverpool Epidemic Strain
Acinetobacter baumannii 24845_7	1310861	PRJNA194938	194938	Proteobacteria	Gammaproteobacteria	4.09502	39.1	-	JFWH01	100	4099	3808	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570316	GCA_000589195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/195/GCA_000589195.1_ASM58919v1	-	24845_7
Streptococcus agalactiae serogroup III	216495	PRJNA324749	324749	Terrabacteria group	Firmicutes	2.10166	35.4	-	MCQQ01	47	2154	2029	11/17/16	3/20/17	Contig	GSK Vaccines	SAMN05213955	GCA_001880725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/725/GCA_001880725.1_ASM188072v1	27574519	GZ08
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.03479	41.2	-	FIGD01	25	2037	1922	2/10/16	3/19/17	Contig	SC	SAMEA1316524	GCA_900060325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/325/GCA_900060325.1_7114_5_28	-	LSS28
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.74031	50.7	-	CXMO01	406	5361	4576	7/17/15	2/24/17	Scaffold	SC	SAMEA2057219	GCA_001258735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/735/GCA_001258735.1_9870_6_20	-	143558
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08772	68.2	-	CFXK01	62	7313	6785	3/15/15	3/26/17	Scaffold	SC	SAMEA806996	GCA_001320945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/945/GCA_001320945.1_7907_5_4	-	C4
Vibrio cholerae	666	PRJNA325600	325600	Proteobacteria	Gammaproteobacteria	4.00096	47.5	-	MDYI01	29	3860	3638	9/2/16	3/28/17	Scaffold	Karolinska Institutet	SAMN05578961	GCA_001718105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/718/105/GCA_001718105.1_ASM171810v1	-	L11
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.27343	29	-	FAEY01	1100	3881	3716	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664216	GCA_900013065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/065/GCA_900013065.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA341720	341720	Proteobacteria	Gammaproteobacteria	5.02785	45.3	-	MIEM01	695	5074	4470	12/12/16	6/12/17	Contig	Centro de Investigacion Cientifica y de Educacion Superior de Ensenada Baja California	SAMN05727869	GCA_001901565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/565/GCA_001901565.1_ASM190156v1	28099500	CICESE-170
Klebsiella pneumoniae	573	PRJNA398977	398977	Proteobacteria	Gammaproteobacteria	6.30817	56.4	-	NRHU01	1831	6562	3775	9/5/17	9/5/17	Scaffold	Christian Medical College	SAMN07520304	GCA_002286395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/395/GCA_002286395.1_ASM228639v1	-	BA34595
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.98417	37.7	-	FXFB01	156	3079	2875	4/26/17	5/6/17	Scaffold	SC	SAMEA3893571	GCA_900178555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/555/GCA_900178555.1_19789_6_130	-	VREN2776
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	0.689451	60.7	-	CSLY01	1501	943	933	3/22/15	6/13/15	Scaffold	SC	SAMEA751444	GCA_001203155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/155/GCA_001203155.1_3888_1_6	-	B267
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65978	31.4	-	FBOF01	22	1716	1628	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683451	GCA_001497215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/215/GCA_001497215.1_H072680465	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.83041	64.2	-	CSYC01	63	4872	4695	3/24/15	3/18/17	Scaffold	SC	SAMEA1464836	GCA_001214665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/665/GCA_001214665.1_7396_8_74	-	PAP122
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15693	64.1	-	CSYT01	20	5262	5083	3/24/15	3/18/17	Scaffold	SC	SAMEA1464903	GCA_001214685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/685/GCA_001214685.1_7396_8_93	-	PAP141
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75013	31.2	-	FBJQ01	23	1842	1748	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683316	GCA_001497235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/235/GCA_001497235.1_EC3322	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	0.755957	61	-	CSQX01	1573	1025	1011	3/23/15	6/13/15	Scaffold	SC	SAMEA751443	GCA_001203895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/895/GCA_001203895.1_3888_1_8	-	B269
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.09866	37.6	-	FXFK01	183	3233	2959	4/26/17	5/6/17	Scaffold	SC	SAMEA3893619	GCA_900178565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/565/GCA_900178565.1_19789_6_154	-	VREN3204
Klebsiella pneumoniae	573	PRJNA399259	399259	Proteobacteria	Gammaproteobacteria	6.22843	56.5	-	NRHX01	2466	6474	3614	9/5/17	9/5/17	Scaffold	Christian Medical College	SAMN07528773	GCA_002286675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/675/GCA_002286675.1_ASM228667v1	-	BA655
Vibrio parahaemolyticus	670	PRJNA357947	357947	Proteobacteria	Gammaproteobacteria	5.20172	45.3	-	MSEF01	89	5033	4816	12/21/16	3/28/17	Contig	Guangdong Institute of Microbiology	SAMN06162268	GCA_001913735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/735/GCA_001913735.1_ASM191373v1	-	GIMxtfL61-2011.05
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.14461	28.6	-	FAFD01	413	3775	3647	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664219	GCA_900013095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/095/GCA_900013095.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA327887	327887	Proteobacteria	Gammaproteobacteria	4.06158	47.5	-	MDST01	83	3896	3684	9/19/16	3/28/17	Scaffold	University of Alberta	SAMN05361712	GCA_001735565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/735/565/GCA_001735565.1_ASM173556v1	-	S12
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08972	68.2	-	CFXG01	70	7303	6790	3/15/15	3/26/17	Scaffold	SC	SAMEA806997	GCA_001320985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/320/985/GCA_001320985.1_7907_5_9	-	C9
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.68886	50.7	-	CWYH01	389	5215	4501	7/16/15	2/24/17	Scaffold	SC	SAMEA2445708	GCA_001258755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/755/GCA_001258755.1_12971_8_27	-	H092760242
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.0425	41.2	-	FIOE01	25	2050	1939	2/10/16	3/19/17	Contig	SC	SAMEA1566097	GCA_900060335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/335/GCA_900060335.1_8337_6_54	-	EN031
Streptococcus agalactiae serogroup III	216495	PRJNA324749	324749	Terrabacteria group	Firmicutes	2.05066	35.3	-	MCQT01	47	2092	1959	11/17/16	3/20/17	Contig	GSK Vaccines	SAMN05213958	GCA_001880745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/745/GCA_001880745.1_ASM188074v1	27574519	GZ13
Acinetobacter baumannii 44895_10	1310894	PRJNA194971	194971	Proteobacteria	Gammaproteobacteria	4.0407	39.2	-	JFVI01	161	4035	3724	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570343	GCA_000589275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/275/GCA_000589275.1_ASM58927v1	-	44895_10
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.45748	66.5	-	CCOB01	60	6178	6007	9/5/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2732222	GCA_000824365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/365/GCA_000824365.1_LES_CF_sputum_CF03_contigs_39_a1	-	Liverpool Epidemic Strain
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11445	51.7	-	FEZS01	76	2450	2118	2/9/16	3/21/17	Scaffold	SC	SAMEA2674212	GCA_900029265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/265/GCA_900029265.1_14555_5_36	-	2842STDY5881377
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.64176	38.9	-	FLQM01	89	1623	1486	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA4000272	GCA_900088265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/265/GCA_900088265.1_STT-1-2-3-Cm	-	-
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08928	39.7	-	CMDU01	55	2331	2099	3/21/15	3/11/17	Contig	SC	SAMEA1029086	GCA_001104785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/785/GCA_001104785.1_7011_4_18	-	SMRU2778
Escherichia coli 97.0010	1005419	PRJNA65635	65635	Proteobacteria	Gammaproteobacteria	5.33875	50.4	-	ANMB01	712	5814	5355	12/10/12	2/24/17	Scaffold	Institute for Genome Sciences	SAMN01041351	GCA_000318445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/318/445/GCA_000318445.2_ASM31844v2	-	97.001
Mycobacterium tuberculosis NRITLD11	1455285	PRJNA237407	237407	Terrabacteria group	Actinobacteria	4.38169	65.6	-	JJSQ01	84	4315	4099	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628500	GCA_000657395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/395/GCA_000657395.1_Myco_tube_NRITLD11_V1	-	NRITLD11
Listeria monocytogenes	1639	PRJEB10747	310477	Terrabacteria group	Firmicutes	2.8667	37.9	-	CYVI01	30	2886	2812	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540850	GCA_001564815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/815/GCA_001564815.1_LM07-00596_assembly	-	LM07-00596
Campylobacter jejuni	197	PRJDB4440	309279	Proteobacteria	delta/epsilon subdivisions	1.77851	30.5	-	BCNK01	40	1879	1657	1/19/16	4/17/17	Contig	Nagoya University Graduate School of Medicine	SAMD00044346	GCA_001570705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/705/GCA_001570705.1_ASM157070v1	26810658	NC05-27
Salmonella enterica subsp. enterica serovar Newport str. CVM 19443	858309	PRJNA49979	49979	Proteobacteria	Gammaproteobacteria	4.80635	52.2	-	AHUB01	62	4934	4663	6/25/12	5/19/17	Contig	FDA	SAMN01765623	GCA_000272915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/915/GCA_000272915.1_ASM27291v1	22933769	CVM 19443
Staphylococcus aureus M1135	1402648	PRJNA219998	219998	Terrabacteria group	Firmicutes	2.88722	32.9	-	JAXD01	15	3033	2869	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02360805	GCA_000532715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/715/GCA_000532715.1_Stap_aure_M1135_V1	-	M1135
Staphylococcus aureus M1155	1402667	PRJNA220017	220017	Terrabacteria group	Firmicutes	2.87687	32.8	-	JAXC01	21	3034	2874	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02360824	GCA_000532735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/735/GCA_000532735.1_Stap_aure_M1155_V1	-	M1155
Salmonella enterica subsp. enterica serovar Newport str. CVM 37978	858310	PRJNA49981	49981	Proteobacteria	Gammaproteobacteria	4.79553	52.3	-	AHUC01	38	4913	4644	6/25/12	5/19/17	Contig	FDA	SAMN01765624	GCA_000272935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/935/GCA_000272935.1_ASM27293v1	22933769	CVM 37978
Campylobacter jejuni	197	PRJNA294867	294867	Proteobacteria	delta/epsilon subdivisions	1.73678	30.1	-	LKCR01	45	1850	1680	3/3/16	4/10/17	Contig	North Carolina State University	SAMN04074751	GCA_001579555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/555/GCA_001579555.1_ASM157955v1	-	11601MD
Listeria monocytogenes	1639	PRJEB10748	310478	Terrabacteria group	Firmicutes	2.96048	37.9	-	CYVL01	34	2978	2910	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540851	GCA_001564835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/835/GCA_001564835.1_LM07-00876_assembly	-	LM07-00876
Mycobacterium tuberculosis NRITLD12	1455286	PRJNA237408	237408	Terrabacteria group	Actinobacteria	4.30344	65.4	-	JJSP01	250	4407	4001	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628501	GCA_000657415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/415/GCA_000657415.1_Myco_tube_NRITLD12_V1	-	NRITLD12
Escherichia coli O104:H4 str. 11-02318	1240773	PRJNA174140	174140	Proteobacteria	Gammaproteobacteria	5.43388	50.6	-	AMVW01	41	5787	5351	12/11/12	2/22/17	Scaffold	Broad Institute	SAMN01141742	GCA_000319835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/835/GCA_000319835.1_Esch_coli_11-02318_V1	-	11-02318
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00617	39.7	-	CNOA02	104	2171	1979	3/22/15	3/11/17	Contig	SC	SAMEA1032628	GCA_001104805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/805/GCA_001104805.2_6925_2_73	-	R34-3054
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.64129	38.9	-	FLQF01	85	1622	1490	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA4000270	GCA_900088275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/275/GCA_900088275.1_STT-1-2-1-Cm	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.22492	51.6	-	FEZG01	77	2608	2221	2/9/16	3/21/17	Scaffold	SC	SAMEA2674165	GCA_900029275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/275/GCA_900029275.1_14555_5_22	-	2842STDY5881363
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.45731	66.5	-	CCPC01	60	6176	6007	9/5/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2732223	GCA_000824385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/385/GCA_000824385.1_LES_CF_sputum_CF03_contigs_40_a1	-	Liverpool Epidemic Strain
Acinetobacter baumannii 44895_1	1310885	PRJNA194962	194962	Proteobacteria	Gammaproteobacteria	4.0205	39.2	-	JFVH01	117	3980	3719	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570344	GCA_000589295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/295/GCA_000589295.1_ASM58929v1	-	44895_1
Streptococcus agalactiae serogroup III	216495	PRJNA324749	324749	Terrabacteria group	Firmicutes	2.10515	35.4	-	MCQV01	38	2140	2014	11/17/16	3/20/17	Contig	GSK Vaccines	SAMN05213960	GCA_001880765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/765/GCA_001880765.1_ASM188076v1	27574519	GZ19
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.07607	41.2	-	FIOD01	23	2095	1984	2/10/16	4/2/17	Contig	SC	SAMEA1566020	GCA_900060345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/345/GCA_900060345.1_8337_6_56	-	EN050
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.65708	50.8	-	CXCY01	355	5006	4497	7/16/15	2/24/17	Scaffold	SC	SAMEA954706	GCA_001258795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/795/GCA_001258795.1_5236_6_2	-	Sh259_440930
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.09059	68.2	-	CIJT01	71	7308	6790	4/21/15	3/26/17	Scaffold	SC	SAMEA806999	GCA_001321015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/015/GCA_001321015.1_7907_5_7	-	C7
Vibrio cholerae O1	127906	PRJNA327651	327651	Proteobacteria	Gammaproteobacteria	4.03456	47.5	-	MBSF01	599	3999	3580	11/1/16	3/28/17	Scaffold	"Emerging Pathogens Institute, University of Florida,"	SAMN05427411	GCA_001858445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/445/GCA_001858445.1_ASM185844v1	-	CMR020
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.15819	28.7	-	FAFE01	984	3860	3652	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664220	GCA_900013105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/105/GCA_900013105.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA357986	357986	Proteobacteria	Gammaproteobacteria	5.20041	45.3	-	MSEG01	85	5028	4820	12/21/16	3/28/17	Contig	Guangdong Institute of Microbiology	SAMN06163187	GCA_001913745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/745/GCA_001913745.1_ASM191374v1	-	GIMxtfL65-2011.05
Klebsiella pneumoniae	573	PRJNA399639	399639	Proteobacteria	Gammaproteobacteria	6.25289	56.3	-	NRQZ01	2953	6764	4134	9/7/17	9/7/17	Scaffold	Christian Medical College	SAMN07542376	GCA_002287665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/665/GCA_002287665.1_ASM228766v1	-	BA2005
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.17718	37.4	-	FXFN01	163	3299	3093	4/26/17	5/6/17	Scaffold	SC	SAMEA3893541	GCA_900178575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/575/GCA_900178575.1_19789_6_117	-	VREN2307
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.62264	67.4	-	CSQU01	1380	3608	3555	3/22/15	6/13/15	Scaffold	SC	SAMEA751252	GCA_001204135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/135/GCA_001204135.1_5601_3_2	-	B325
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.58034	31.7	-	FBOE01	37	1584	1514	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683409	GCA_001497255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/255/GCA_001497255.1_H061680633	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15968	64.1	-	CSWF01	16	5264	5086	3/24/15	3/18/17	Scaffold	SC	SAMEA1464908	GCA_001214725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/725/GCA_001214725.1_7396_7_30	-	PAP078
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16338	64.1	-	CSXY01	32	5276	5081	3/24/15	3/18/17	Scaffold	SC	SAMEA1464928	GCA_001214825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/825/GCA_001214825.1_7396_8_71	-	PAP119
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.84588	31.1	-	FBGR01	83	1906	1772	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683241	GCA_001497275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/275/GCA_001497275.1_SWAN331	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	0.472132	59.4	-	CSOJ01	1118	622	617	3/23/15	6/13/15	Scaffold	SC	SAMEA751445	GCA_001206915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/915/GCA_001206915.1_3888_1_7	-	B268
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.19416	37.4	-	FXEP01	172	3344	3090	4/26/17	5/6/17	Scaffold	SC	SAMEA3893517	GCA_900178585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/585/GCA_900178585.1_19789_6_108	-	VREN2165
Klebsiella pneumoniae	573	PRJNA399648	399648	Proteobacteria	Gammaproteobacteria	5.70103	57.2	-	NRRA01	1831	5782	2834	9/7/17	9/7/17	Scaffold	Christian Medical College	SAMN07542426	GCA_002287675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/675/GCA_002287675.1_ASM228767v1	-	VBA34695
Vibrio parahaemolyticus	670	PRJNA358142	358142	Proteobacteria	Gammaproteobacteria	5.10702	45.3	-	MSEH01	46	4926	4711	12/21/16	3/28/17	Contig	Guangdong Institute of Microbiology	SAMN06166873	GCA_001913775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/775/GCA_001913775.1_ASM191377v1	-	GIMxtfL71-2011.05
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.12333	28.5	-	FAFF01	213	3790	3669	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664222	GCA_900013115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/115/GCA_900013115.1_Peptoclostridium_difficile	-	-
Vibrio cholerae O1	127906	PRJNA327651	327651	Proteobacteria	Gammaproteobacteria	4.03727	47.5	-	MBSG01	189	3895	3654	11/1/16	3/28/17	Scaffold	"Emerging Pathogens Institute, University of Florida,"	SAMN05427412	GCA_001858455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/455/GCA_001858455.1_ASM185845v1	-	CMR021
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.0882	68.2	-	CIGV01	69	7300	6784	4/21/15	3/26/17	Scaffold	SC	SAMEA807000	GCA_001321045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/045/GCA_001321045.1_7907_5_8	-	C8
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.5919	50.7	-	CXEQ01	421	4952	4365	7/16/15	2/24/17	Scaffold	SC	SAMEA954543	GCA_001258815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/815/GCA_001258815.1_5417_2_7	-	20052631_1361398
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05887	41.1	-	FIPL01	24	2074	1966	2/10/16	3/19/17	Contig	SC	SAMEA1566179	GCA_900060355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/355/GCA_900060355.1_8525_5_23	-	SS17
Streptococcus agalactiae	1311	PRJNA379816	379816	Terrabacteria group	Firmicutes	2.15698	35.4	-	NAPX01	70	2246	2137	4/21/17	4/24/17	Contig	Sichuan Agricultural University	SAMN06621589	GCA_002104835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/835/GCA_002104835.1_ASM210483v1	-	DML120817
Acinetobacter baumannii 44895_2	1310886	PRJNA194963	194963	Proteobacteria	Gammaproteobacteria	4.05843	39.2	-	JFVG01	124	4017	3742	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570423	GCA_000589315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/315/GCA_000589315.1_ASM58931v1	-	44895_2
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.45715	66.5	-	CCPG01	60	6175	6005	9/6/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2733007	GCA_000824405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/405/GCA_000824405.1_LES_CF_sputum_CF03_contigs_1_a1	-	Liverpool Epidemic Strain
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16315	51.5	-	FEQO01	82	2540	2164	2/9/16	3/21/17	Scaffold	SC	SAMEA2674560	GCA_900029805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/805/GCA_900029805.1_14355_7_94	-	2842STDY5881723
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.6404	38.9	-	FLQL01	103	1627	1487	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA4000278	GCA_900088285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/285/GCA_900088285.1_STT-1-2-14-Cm	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05608	39.6	-	CNVH02	146	2222	2028	3/23/15	3/11/17	Contig	SC	SAMEA1032479	GCA_001104945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/945/GCA_001104945.2_6999_7_11	-	366293
Escherichia coli O104:H4 str. Ec11-9450	1240758	PRJNA76801	76801	Proteobacteria	Gammaproteobacteria	5.31712	50.7	-	AGWF01	10	5573	5203	12/11/12	2/22/17	Scaffold	Broad Institute	SAMN00771318	GCA_000319855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/855/GCA_000319855.1_Esch_coli_Ec_11-9450_V2	-	Ec 11-9450
Mycobacterium tuberculosis NRITLD13	1455287	PRJNA237409	237409	Terrabacteria group	Actinobacteria	4.39662	65.6	-	JJSO01	86	4313	4102	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628502	GCA_000657435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/435/GCA_000657435.1_Myco_tube_NRITLD13_V1	-	NRITLD13
Listeria monocytogenes	1639	PRJEB10750	310479	Terrabacteria group	Firmicutes	3.00144	37.9	-	CYVS01	25	3030	2950	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540852	GCA_001564855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/855/GCA_001564855.1_LM07-00948_assembly	-	LM07-00948
Campylobacter jejuni	197	PRJNA338299	338299	Proteobacteria	delta/epsilon subdivisions	1.72006	31.4	-	MDDM01	35	1781	1681	9/5/16	3/20/17	Contig	Huazhong Agricultural University	SAMN05414471	GCA_001719575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/575/GCA_001719575.1_ASM171957v1	-	Cj1655
Salmonella enterica subsp. enterica serovar Newport str. CVM 19593	858311	PRJNA49983	49983	Proteobacteria	Gammaproteobacteria	4.65267	52.2	-	AHUD01	65	4745	4511	6/25/12	5/19/17	Contig	FDA	SAMN01765625	GCA_000272955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/955/GCA_000272955.1_ASM27295v1	22933769	CVM 19593
Staphylococcus aureus M1163	1402675	PRJNA220025	220025	Terrabacteria group	Firmicutes	2.91981	33.1	-	JAXB01	20	3033	2867	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02360832	GCA_000532755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/755/GCA_000532755.1_Stap_aure_M1163_V1	-	M1163
Staphylococcus aureus M1175	1402684	PRJNA220034	220034	Terrabacteria group	Firmicutes	2.87643	32.9	-	JAXA01	6	3020	2859	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02360841	GCA_000532775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/775/GCA_000532775.1_Stap_aure_M1175_V1	-	M1175
Salmonella enterica subsp. enterica serovar Newport str. CVM 19470	858312	PRJNA49985	49985	Proteobacteria	Gammaproteobacteria	4.72908	52.1	-	AHUE01	74	4857	4600	6/25/12	5/19/17	Contig	FDA	SAMN01765626	GCA_000272975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/272/975/GCA_000272975.1_ASM27297v1	22933769	CVM 19470
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.68115	30.4	-	MJVH01	31	1764	1552	10/4/16	4/21/17	Contig	University of California at Davis	SAMN03359146	GCA_001761845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/845/GCA_001761845.1_ASM176184v1	-	BCW_3789
Listeria monocytogenes	1639	PRJEB10751	310480	Terrabacteria group	Firmicutes	3.08509	37.8	-	CYVJ01	53	3159	3083	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540853	GCA_001564875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/875/GCA_001564875.1_LM07-01014_assembly	-	LM07-01014
Mycobacterium tuberculosis NRITLD14	1455288	PRJNA237410	237410	Terrabacteria group	Actinobacteria	4.41237	65.6	-	JJSN01	67	4332	4136	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628503	GCA_000657455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/455/GCA_000657455.1_Myco_tube_NRITLD14_V1	-	NRITLD14
Escherichia coli O104:H4 str. Ec11-9990	1240760	PRJNA76803	76803	Proteobacteria	Gammaproteobacteria	5.39713	50.6	-	AGWG01	15	5691	5277	12/11/12	2/22/17	Scaffold	Broad Institute	SAMN00771319	GCA_000319875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/875/GCA_000319875.1_Esch_coli_Ec_11-9990_V2	-	Ec11-9990
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.20284	39.4	-	CLQD01	92	2452	2219	3/21/15	3/11/17	Contig	SC	SAMEA1028915	GCA_001104985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/985/GCA_001104985.1_6949_3_5	-	SMRU2453
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63701	38.9	-	FLQA01	63	1622	1484	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA4000275	GCA_900088295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/295/GCA_900088295.1_STT-1-2-11-Cm	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11061	51.8	-	FEQQ01	58	2467	2126	2/9/16	3/21/17	Scaffold	SC	SAMEA2674445	GCA_900029815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/815/GCA_900029815.1_14355_8_5	-	2842STDY5881730
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.46159	66.5	-	CCPF01	80	6179	6004	9/5/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2733008	GCA_000824425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/425/GCA_000824425.1_LES_CF_sputum_CF03_contigs_2_a1	-	Liverpool Epidemic Strain
Acinetobacter baumannii 25253_8	1310882	PRJNA194959	194959	Proteobacteria	Gammaproteobacteria	4.03061	39.2	-	JFVX01	101	3998	3728	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570326	GCA_000589355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/355/GCA_000589355.1_ASM58935v1	-	25253_8
Streptococcus agalactiae	1311	PRJNA382326	382326	Terrabacteria group	Firmicutes	1.97334	35.3	-	NDGA01	33	2060	1849	5/15/17	5/23/17	Contig	Swiss Tropical and Public Health Institute	SAMN06707240	GCA_002135445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/445/GCA_002135445.1_ASM213544v1	-	ST 613
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.22587	41.3	-	FIFO01	32	2242	2116	2/10/16	3/19/17	Contig	SC	SAMEA1316527	GCA_900060635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/635/GCA_900060635.1_7114_5_11	-	LSS11
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.73338	50.7	-	CXIR01	393	5354	4558	7/16/15	2/24/17	Scaffold	SC	SAMEA2003385	GCA_001258835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/835/GCA_001258835.1_8289_7_78	-	85721
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.09531	68.2	-	CFZL01	74	7320	6793	3/15/15	3/26/17	Scaffold	SC	SAMEA807002	GCA_001321065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/065/GCA_001321065.1_7907_5_12	-	C12
Vibrio cholerae O1	127906	PRJNA327651	327651	Proteobacteria	Gammaproteobacteria	4.03197	47.5	-	MBSH01	173	3875	3646	11/1/16	3/28/17	Scaffold	"Emerging Pathogens Institute, University of Florida,"	SAMN05427413	GCA_001858465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/465/GCA_001858465.1_ASM185846v1	-	CMR022
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.28887	29	-	FAFI01	1373	3933	3715	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664223	GCA_900013125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/125/GCA_900013125.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA357878	357878	Proteobacteria	Gammaproteobacteria	5.28949	45.3	-	MSEE01	141	5186	4913	12/21/16	3/28/17	Contig	Guangdong Institute of Microbiology	SAMN06161545	GCA_001913785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/785/GCA_001913785.1_ASM191378v1	-	GIMxtf381-2013.06
Klebsiella pneumoniae	573	PRJNA340354	340354	Proteobacteria	Gammaproteobacteria	5.63648	57	-	NRSU01	613	5768	4349	9/8/17	9/8/17	Scaffold	Christian Medical College	SAMN07550949	GCA_002288615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/615/GCA_002288615.1_ASM228861v1	-	VBA6949
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.98071	37.7	-	FXEO01	164	3099	2877	4/26/17	5/6/17	Scaffold	SC	SAMEA3893575	GCA_900178595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/595/GCA_900178595.1_19789_6_132	-	VREN2778
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.62461	66.8	-	CSMN01	902	3668	3617	3/22/15	6/13/15	Scaffold	SC	SAMEA1931450	GCA_001209025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/025/GCA_001209025.1_5463_5_6	-	B317
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.76458	31.7	-	FBOV01	205	1706	1617	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683448	GCA_001497295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/295/GCA_001497295.1_H124500577	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16005	64.1	-	CSYH01	26	5269	5077	3/24/15	3/18/17	Scaffold	SC	SAMEA1464913	GCA_001214845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/845/GCA_001214845.1_7396_8_80	-	PAP128
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.34243	64	-	CSWY01	31	5497	5303	3/24/15	3/18/17	Scaffold	SC	SAMEA1464912	GCA_001214885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/885/GCA_001214885.1_7396_7_46	-	PAP094
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.73071	31.3	-	FBMX01	48	1794	1669	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683402	GCA_001497335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/335/GCA_001497335.1_H085160740	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.46317	67.1	-	CSRD01	1628	3554	3506	3/22/15	6/13/15	Scaffold	SC	SAMEA751485	GCA_001210485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/485/GCA_001210485.1_5515_7_4	-	B139
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.17266	37.4	-	FXEM01	160	3315	3079	4/26/17	5/6/17	Scaffold	SC	SAMEA3893533	GCA_900178605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/605/GCA_900178605.1_19789_6_114	-	VREN2302
Klebsiella pneumoniae	573	PRJNA401424	401424	Proteobacteria	Gammaproteobacteria	5.44813	57.3	-	NTCV01	85	5563	5242	9/11/17	9/13/17	Scaffold	Federal University of Uberlandia	SAMN07604909	GCA_002289105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/105/GCA_002289105.1_ASM228910v1	-	KPC02
Vibrio parahaemolyticus	670	PRJNA358320	358320	Proteobacteria	Gammaproteobacteria	5.08365	45.2	-	MSFW01	67	5002	4764	12/24/16	3/28/17	Contig	Guangdong Institute of Microbiology	SAMN06169820	GCA_001921805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/921/805/GCA_001921805.1_ASM192180v1	-	GIMxtfL88-2011.05
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.15577	28.5	-	CZYK01	266	3812	3699	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664045	GCA_900013185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/185/GCA_900013185.1_Peptoclostridium_difficile	-	-
Vibrio cholerae O1	127906	PRJNA327651	327651	Proteobacteria	Gammaproteobacteria	4.02853	47.5	-	MBSE01	173	3868	3670	11/1/16	3/28/17	Scaffold	"Emerging Pathogens Institute, University of Florida,"	SAMN05427410	GCA_001858475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/475/GCA_001858475.1_ASM185847v1	-	CMR019
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.09658	68.2	-	CFXP01	70	7318	6796	3/15/15	3/26/17	Scaffold	SC	SAMEA807003	GCA_001321085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/085/GCA_001321085.1_7909_4_13	-	C46
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.36121	51.1	-	CXCW01	494	4583	4062	7/16/15	2/24/17	Scaffold	SC	SAMEA954617	GCA_001258855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/855/GCA_001258855.1_5236_5_6	-	Sh54184_440882
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.44853	41.3	-	FIHS01	88	2414	2236	2/10/16	3/19/17	Contig	SC	SAMEA1316534	GCA_900060645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/645/GCA_900060645.1_7114_5_69	-	LSS69
Streptococcus agalactiae	1311	PRJNA382326	382326	Terrabacteria group	Firmicutes	2.04991	35.3	-	NDGB01	50	2163	1954	5/15/17	5/15/17	Contig	Swiss Tropical and Public Health Institute	SAMN06707239	GCA_002135505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/505/GCA_002135505.1_ASM213550v1	-	ST 618
Acinetobacter baumannii 25307_1	1310865	PRJNA194942	194942	Proteobacteria	Gammaproteobacteria	4.0084	39.3	-	JFWO01	97	3953	3695	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570327	GCA_000589375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/375/GCA_000589375.1_ASM58937v1	-	25307_1
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.46005	66.5	-	CCVT01	72	6177	6007	9/3/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2733009	GCA_000824445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/445/GCA_000824445.1_LES_CF_sputum_CF03_contigs_3_a1	-	Liverpool Epidemic Strain
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16839	51.5	-	FEWX01	92	2514	2160	2/9/16	3/21/17	Scaffold	SC	SAMEA2674202	GCA_900029825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/825/GCA_900029825.1_14324_4_92	-	2842STDY5881337
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63656	38.9	-	FLQD01	76	1616	1482	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA4000279	GCA_900088305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/305/GCA_900088305.1_STT-1-2-15-Cm	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08044	39.5	-	CNNP02	165	2222	2030	3/23/15	3/11/17	Contig	SC	SAMEA1032488	GCA_001105005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/005/GCA_001105005.2_6925_1_50	-	R34-3031
Escherichia coli O104:H4 str. Ec11-4984	1240761	PRJNA81661	81661	Proteobacteria	Gammaproteobacteria	5.30731	50.6	-	AHOU01	13	5572	5190	12/11/12	2/22/17	Scaffold	Broad Institute	SAMN00778954	GCA_000319915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/915/GCA_000319915.1_Esch_coli_Ec11-4984_V1	-	Ec11-4984
Mycobacterium tuberculosis NRITLD15	1455289	PRJNA237411	237411	Terrabacteria group	Actinobacteria	4.38836	65.6	-	JJSM01	83	4320	4100	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628504	GCA_000657475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/475/GCA_000657475.1_Myco_tube_NRITLD15_V1	-	NRITLD15
Listeria monocytogenes	1639	PRJEB10752	310481	Terrabacteria group	Firmicutes	2.89066	37.9	-	CYVK01	18	2884	2819	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540854	GCA_001564895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/895/GCA_001564895.1_LM07-01042_assembly	-	LM07-01042
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.80018	30.5	-	MJWG01	25	1906	1774	10/4/16	3/20/17	Contig	University of California at Davis	SAMN03358119	GCA_001762125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/125/GCA_001762125.1_ASM176212v1	-	BCW_4452
Salmonella enterica subsp. enterica serovar Enteritidis str. 2010K-2599	1182758	PRJNA162755	162755	Proteobacteria	Gammaproteobacteria	4.72793	52.1	-	AKFW01	40	4859	4556	7/10/12	5/19/17	Contig	Centers for Disease Control & Prevention	SAMN02415217	GCA_000278465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/465/GCA_000278465.1_CDC_2010K-2599v1.0	-	2010K-2599
Staphylococcus aureus M1176	1402685	PRJNA220035	220035	Terrabacteria group	Firmicutes	2.85629	32.8	-	JAWZ01	8	3001	2851	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02360842	GCA_000532795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/795/GCA_000532795.1_Stap_aure_M1176_V1	-	M1176
Staphylococcus aureus M1177	1402686	PRJNA220036	220036	Terrabacteria group	Firmicutes	2.94717	33	-	JAWY01	22	3081	2913	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02360843	GCA_000532815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/815/GCA_000532815.1_Stap_aure_M1177_V1	-	M1177
Salmonella enterica subsp. enterica serovar Enteritidis str. 2010K-0669	1182757	PRJNA162753	162753	Proteobacteria	Gammaproteobacteria	4.72816	52.1	-	AKFX01	35	4861	4557	7/10/12	5/19/17	Contig	Centers for Disease Control & Prevention	SAMN02415218	GCA_000278485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/485/GCA_000278485.1_CDC-2010K_0669v1.0	-	2010K-0669
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.67041	30.6	-	MJWJ01	34	1712	1601	10/4/16	3/20/17	Contig	University of California at Davis	SAMN03357975	GCA_001762175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/175/GCA_001762175.1_ASM176217v1	-	BCW_4230
Listeria monocytogenes	1639	PRJEB10753	310482	Terrabacteria group	Firmicutes	2.86811	37.9	-	CYVM01	28	2871	2805	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540855	GCA_001564915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/915/GCA_001564915.1_LM07-01067_assembly	-	LM07-01067
Mycobacterium tuberculosis NRITLD16	1455290	PRJNA237412	237412	Terrabacteria group	Actinobacteria	4.38979	65.6	-	JJSL01	81	4329	4101	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628505	GCA_000657495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/495/GCA_000657495.1_Myco_tube_NRITLD16_V1	-	NRITLD16
Escherichia coli O104:H4 str. Ec11-5604	1240766	PRJNA81663	81663	Proteobacteria	Gammaproteobacteria	5.28679	50.6	-	AHOV01	19	5569	5176	12/11/12	2/22/17	Scaffold	Broad Institute	SAMN00778955	GCA_000319935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/935/GCA_000319935.1_Esch_coli_Ec11-5604_V1	-	Ec11-5604
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.10675	39.5	-	CMRO01	66	2329	2098	3/22/15	3/4/17	Contig	SC	SAMEA2062172	GCA_001105065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/065/GCA_001105065.1_9803_8_45	-	23F
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.64042	38.9	-	FLPV01	82	1627	1490	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA4000277	GCA_900088315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/315/GCA_900088315.1_STT-1-2-13-Cm	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11499	51.8	-	FEXP01	82	2462	2127	2/9/16	3/21/17	Scaffold	SC	SAMEA2674433	GCA_900029835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/835/GCA_900029835.1_14355_7_1	-	2842STDY5881630
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.46076	66.5	-	CCPH01	74	6184	6006	9/5/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2733010	GCA_000824465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/465/GCA_000824465.1_LES_CF_sputum_CF03_contigs_5_a1	-	Liverpool Epidemic Strain
Acinetobacter baumannii 25307_2	1310866	PRJNA194943	194943	Proteobacteria	Gammaproteobacteria	3.98129	39.1	-	JFVW01	180	3928	3655	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570328	GCA_000589395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/395/GCA_000589395.1_ASM58939v1	-	25307_2
Streptococcus agalactiae	1311	PRJNA274685	274685	Terrabacteria group	Firmicutes	2.05865	35.3	-	JYCU01	40	2114	2018	6/7/17	6/9/17	Contig	CUHK	SAMN03331942	GCA_002176585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/585/GCA_002176585.1_ASM217658v1	-	CU_GBS_10
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.16601	41	-	FIHZ01	24	2170	2015	2/10/16	3/19/17	Contig	SC	SAMEA1316650	GCA_900060655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/655/GCA_900060655.1_7114_5_76	-	LSS76
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.77913	50.7	-	CXOD01	398	5414	4604	7/20/15	2/24/17	Scaffold	SC	SAMEA2055845	GCA_001258895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/895/GCA_001258895.1_9870_7_9	-	144444
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.10389	68.2	-	CIGX01	66	7323	6800	4/21/15	3/27/17	Scaffold	SC	SAMEA807004	GCA_001321105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/105/GCA_001321105.1_7909_4_12	-	C45
Vibrio cholerae O1	127906	PRJNA327651	327651	Proteobacteria	Gammaproteobacteria	4.02121	47.5	-	MBQH01	579	3906	3569	11/1/16	3/28/17	Scaffold	"Emerging Pathogens Institute, University of Florida,"	SAMN05354843	GCA_001858585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/858/585/GCA_001858585.1_ASM185858v1	-	CMR004
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.17629	28.9	-	CZZE01	1318	3836	3597	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664062	GCA_900013205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/205/GCA_900013205.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA273159	273159	Proteobacteria	Gammaproteobacteria	5.04324	45.3	-	MUCG01	67	4779	4618	1/30/17	3/29/17	Contig	FDA Center for Food Safety and Applied Nutrition	SAMN02368268	GCA_001975475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/975/475/GCA_001975475.1_ASM197547v1	-	GCSL_R130
Klebsiella pneumoniae	573	PRJNA401423	401423	Proteobacteria	Gammaproteobacteria	6.03584	57.1	-	NTCW01	103	6172	5813	9/11/17	9/13/17	Scaffold	Federal University of Uberlandia	SAMN07604911	GCA_002289165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/165/GCA_002289165.1_ASM228916v1	-	B16
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.19604	37.4	-	FXEV01	162	3355	3101	4/26/17	5/6/17	Scaffold	SC	SAMEA3893536	GCA_900178615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/615/GCA_900178615.1_19789_6_115	-	VREN2303
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.59755	67.2	-	CSLV01	1130	3598	3546	3/23/15	6/14/15	Scaffold	SC	SAMEA1933040	GCA_001210905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/905/GCA_001210905.1_5463_6_2	-	B221
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66076	31.4	-	FBAV01	24	1716	1626	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683077	GCA_001497355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/355/GCA_001497355.1_EC3725	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.39135	64	-	CSVY01	120	5557	5285	3/24/15	3/18/17	Scaffold	SC	SAMEA1464942	GCA_001214985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/985/GCA_001214985.1_7396_7_23	-	PAP071
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.19017	64.2	-	CSXH01	53	5198	5039	3/24/15	3/18/17	Scaffold	SC	SAMEA1464873	GCA_001215005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/005/GCA_001215005.1_7396_8_54	-	PAP102
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65954	31.4	-	FBCA01	23	1722	1626	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683114	GCA_001497375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/375/GCA_001497375.1_EC6047	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.46969	66.9	-	CSQS01	1570	3663	3614	3/23/15	6/13/15	Scaffold	SC	SAMEA751437	GCA_001211165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/165/GCA_001211165.1_5476_8_2	-	B274
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.98185	37.7	-	FXET01	163	3097	2888	4/26/17	5/6/17	Scaffold	SC	SAMEA3893621	GCA_900178625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/625/GCA_900178625.1_19789_6_156	-	VREN3239
Klebsiella pneumoniae	573	PRJNA400700	400700	Proteobacteria	Gammaproteobacteria	5.91106	56.9	-	NTGK01	143	6087	5742	9/12/17	9/14/17	Scaffold	Federal University of Uberlandia	SAMN07572975	GCA_002295145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/145/GCA_002295145.1_ASM229514v1	-	B04
Vibrio parahaemolyticus	670	PRJNA355061	355061	Proteobacteria	Gammaproteobacteria	5.23033	45.4	-	MQMQ01	172	5050	4804	2/13/17	2/22/17	Contig	Monash University Malaysia	SAMN06061934	GCA_001996365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/365/GCA_001996365.1_ASM199636v1	-	MVP1
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.38033	28.9	-	FACX01	1683	4031	3808	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664159	GCA_900013225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/225/GCA_900013225.1_Peptoclostridium_difficile	-	-
Vibrio cholerae O1	127906	PRJNA327651	327651	Proteobacteria	Gammaproteobacteria	4.02242	47.5	-	MBQI01	300	3902	3623	11/1/16	3/28/17	Scaffold	"Emerging Pathogens Institute, University of Florida,"	SAMN05417940	GCA_001860225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/225/GCA_001860225.1_ASM186022v1	-	CMR001
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08612	68.2	-	CIBE01	67	7304	6791	4/21/15	3/27/17	Scaffold	SC	SAMEA807006	GCA_001321125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/125/GCA_001321125.1_7909_4_10	-	C43
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.75124	50.5	-	CXEY01	416	5176	4570	7/16/15	2/24/17	Scaffold	SC	SAMEA954821	GCA_001258915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/915/GCA_001258915.1_5417_3_7	-	CS7_1361423
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.03903	41.2	-	FIPO01	23	2050	1934	2/10/16	3/19/17	Contig	SC	SAMEA1566139	GCA_900060665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/665/GCA_900060665.1_8525_5_27	-	SS22
Streptococcus agalactiae	1311	PRJNA274685	274685	Terrabacteria group	Firmicutes	2.06198	35.2	-	JYCV01	23	2139	2022	6/7/17	6/9/17	Contig	CUHK	SAMN03331943	GCA_002176615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/615/GCA_002176615.1_ASM217661v1	-	CU_GBS_12
Acinetobacter baumannii 25307_3	1310867	PRJNA194944	194944	Proteobacteria	Gammaproteobacteria	3.97471	39.2	-	JFVV01	87	3919	3669	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570329	GCA_000589415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/415/GCA_000589415.1_ASM58941v1	-	25307_3
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.45685	66.5	-	CCPK01	62	6178	6005	9/5/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2733011	GCA_000824485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/485/GCA_000824485.1_LES_CF_sputum_CF03_contigs_6_a1	-	Liverpool Epidemic Strain
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16107	51.6	-	FEXQ01	67	2500	2162	2/9/16	3/19/17	Scaffold	SC	SAMEA2674436	GCA_900029845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/845/GCA_900029845.1_14355_7_4	-	2842STDY5881633
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63177	38.9	-	FLPU01	64	1620	1489	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA4000273	GCA_900088325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/325/GCA_900088325.1_STT-1-2-4-Cm	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04683	39.5	-	COAZ02	130	2201	2002	3/23/15	3/11/17	Contig	SC	SAMEA1463087	GCA_001105085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/085/GCA_001105085.2_7622_2_30	-	BR1086
Escherichia coli O104:H4 str. Ec11-4986	1240762	PRJNA81665	81665	Proteobacteria	Gammaproteobacteria	5.30839	50.6	-	AHOW01	13	5599	5210	12/11/12	2/22/17	Scaffold	Broad Institute	SAMN00778956	GCA_000319955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/955/GCA_000319955.1_Esch_coli_Ec11-4986_V1	-	Ec11-4986
Mycobacterium tuberculosis NRITLD17	1455291	PRJNA237413	237413	Terrabacteria group	Actinobacteria	4.41104	65.6	-	JJSK01	77	4340	4111	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628506	GCA_000657515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/515/GCA_000657515.1_Myco_tube_NRITLD17_V1	-	NRITLD17
Listeria monocytogenes	1639	PRJEB10754	310483	Terrabacteria group	Firmicutes	2.87071	37.9	-	CYVN01	26	2909	2851	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540856	GCA_001564935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/935/GCA_001564935.1_LM07-01145_assembly	-	LM07-01145
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.82018	30.3	-	MJXF01	66	1906	1714	10/4/16	3/20/17	Contig	University of California at Davis	SAMN03360166	GCA_001762655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/655/GCA_001762655.1_ASM176265v1	-	BCW_6457
Salmonella enterica subsp. enterica serovar Enteritidis str. 08-0047	1182759	PRJNA162757	162757	Proteobacteria	Gammaproteobacteria	4.68321	52.1	-	AKFY01	98	4832	4488	7/10/12	5/19/17	Contig	Centers for Disease Control & Prevention	SAMN02415219	GCA_000278505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/505/GCA_000278505.1_08-0047v1.0	-	08-0047
Staphylococcus aureus M1183	1402692	PRJNA220042	220042	Terrabacteria group	Firmicutes	2.97368	33	-	JAWX01	9	3145	2970	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02360849	GCA_000532835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/835/GCA_000532835.1_Stap_aure_M1183_V1	-	M1183
Staphylococcus aureus M1184	1402693	PRJNA220043	220043	Terrabacteria group	Firmicutes	2.86535	32.9	-	JAWW01	7	3002	2848	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02360850	GCA_000532855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/855/GCA_000532855.1_Stap_aure_M1184_V1	-	M1184
Salmonella enterica subsp. enterica serovar Enteritidis str. 08-0128	1182760	PRJNA162759	162759	Proteobacteria	Gammaproteobacteria	4.72659	52.1	-	AKFZ01	38	4864	4545	7/10/12	5/19/17	Contig	Centers for Disease Control & Prevention	SAMN02415220	GCA_000278525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/525/GCA_000278525.1_08-0128v1.0	-	08-0128
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.66926	30.6	-	MJYK01	41	1721	1610	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532210	GCA_001763275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/275/GCA_001763275.1_ASM176327v1	-	BCW_3782
Listeria monocytogenes	1639	PRJEB10755	310484	Terrabacteria group	Firmicutes	2.88823	37.9	-	CYVO01	23	2892	2826	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540857	GCA_001564955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/955/GCA_001564955.1_LM07-01337_assembly	-	LM07-01337
Mycobacterium tuberculosis NRITLD19	1455293	PRJNA237415	237415	Terrabacteria group	Actinobacteria	4.39043	65.6	-	JJSI01	83	4333	4115	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628508	GCA_000657535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/535/GCA_000657535.1_Myco_tube_NRITLD19_V1	-	NRITLD19
Escherichia coli O104:H4 str. Ec11-4987	1240763	PRJNA81667	81667	Proteobacteria	Gammaproteobacteria	5.30411	50.6	-	AHOX01	11	5565	5185	12/11/12	2/22/17	Scaffold	Broad Institute	SAMN00778957	GCA_000319975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/975/GCA_000319975.1_Esch_coli_Ec11-4987_V1	-	Ec11-4987
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0586	39.6	-	CNON02	156	2223	2023	3/23/15	3/11/17	Contig	SC	SAMEA1032542	GCA_001105245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/245/GCA_001105245.2_6925_2_86	-	R34-3068
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.64905	38.9	-	FLQG01	102	1629	1486	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA4000271	GCA_900088335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/335/GCA_900088335.1_STT-1-2-2-Cm	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16045	51.5	-	FEZX01	104	2511	2149	2/9/16	3/21/17	Scaffold	SC	SAMEA2674222	GCA_900029855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/855/GCA_900029855.1_14555_5_41	-	2842STDY5881382
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.46132	66.5	-	CCOJ01	69	6178	6005	9/5/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2733022	GCA_000824505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/505/GCA_000824505.1_LES_CF_sputum_CF03_contigs_15_a1	-	Liverpool Epidemic Strain
Acinetobacter baumannii 25307_4	1310868	PRJNA194945	194945	Proteobacteria	Gammaproteobacteria	4.0078	39.3	-	JFVU01	81	3928	3616	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570331	GCA_000589435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/435/GCA_000589435.1_ASM58943v1	-	25307_4
Streptococcus agalactiae	1311	PRJNA374634	374634	Terrabacteria group	Firmicutes	2.05775	35.2	-	MVFE01	31	2138	1984	8/1/17	8/21/17	Contig	Genomic Research Laboratory (GRL)	SAMN06329886	GCA_002239135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/135/GCA_002239135.1_ASM223913v1	-	V87
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.08833	41.2	-	FIPP01	22	2121	2009	2/10/16	3/19/17	Contig	SC	SAMEA1566027	GCA_900060675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/675/GCA_900060675.1_8525_5_28	-	SS23
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.81416	50.5	-	CWTS01	416	5814	4570	7/16/15	2/24/17	Scaffold	SC	SAMEA3345034	GCA_001258935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/935/GCA_001258935.1_H14128036001	-	36001ss_1
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.09289	68.2	-	CIKM01	72	7322	6794	4/21/15	3/26/17	Scaffold	SC	SAMEA807010	GCA_001321145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/145/GCA_001321145.1_7909_4_14	-	C47
Vibrio cholerae O1	127906	PRJNA327651	327651	Proteobacteria	Gammaproteobacteria	4.02677	47.5	-	MBQJ01	261	3909	3635	11/1/16	3/28/17	Scaffold	"Emerging Pathogens Institute, University of Florida,"	SAMN05417943	GCA_001860265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/265/GCA_001860265.1_ASM186026v1	-	CMR007
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.16865	28.9	-	FALO01	1067	3759	3615	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664386	GCA_900013255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/255/GCA_900013255.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.07105	45.3	-	MQUE01	64	4858	4636	2/13/17	4/17/17	Contig	FDA/CFSAN	SAMN06076928	GCA_001998785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/785/GCA_001998785.1_ASM199878v1	28330888	ATCC 17802
Klebsiella pneumoniae	573	PRJNA400691	400691	Proteobacteria	Gammaproteobacteria	5.65806	57.2	-	NTGJ01	123	5790	5477	9/12/17	9/14/17	Scaffold	Federal University of Uberlandia	SAMN07572878	GCA_002295185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/295/185/GCA_002295185.1_ASM229518v1	-	KPC05
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.11812	37.5	-	FXFX01	140	3230	2971	4/26/17	5/6/17	Scaffold	SC	SAMEA3893617	GCA_900178635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/635/GCA_900178635.1_19789_6_152	-	VREN3202
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.65859	67.5	-	CSMA01	1325	3650	3597	3/23/15	6/13/15	Scaffold	SC	SAMEA751148	GCA_001211725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/725/GCA_001211725.1_5601_2_2	-	B083
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75116	31.2	-	FBFC01	19	1832	1741	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683194	GCA_001497395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/395/GCA_001497395.1_EC5983	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15041	64.1	-	CSYD01	24	5255	5074	3/24/15	3/18/17	Scaffold	SC	SAMEA1464851	GCA_001215025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/025/GCA_001215025.1_7396_8_75	-	PAP123
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.25233	64.1	-	CSWD01	18	5302	5180	3/24/15	3/18/17	Scaffold	SC	SAMEA1464934	GCA_001215045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/045/GCA_001215045.1_7396_7_29	-	PAP077
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.79855	31	-	FAYB01	63	1864	1743	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683001	GCA_001497415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/415/GCA_001497415.1_H102380405	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.6166	67.4	-	CSPD01	1272	3613	3563	3/23/15	6/13/15	Scaffold	SC	SAMEA751153	GCA_001262195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/195/GCA_001262195.1_6062_3_1	-	B061
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.11863	37.5	-	FXFL01	130	3228	2982	4/26/17	5/6/17	Scaffold	SC	SAMEA3893618	GCA_900178645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/645/GCA_900178645.1_19789_6_153	-	VREN3203
Klebsiella pneumoniae	573	PRJNA400680	400680	Proteobacteria	Gammaproteobacteria	5.66654	57	-	NTHR01	1121	5872	4262	9/13/17	9/13/17	Scaffold	Christian Medical College	SAMN07572699	GCA_002300655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/655/GCA_002300655.1_ASM230065v1	-	BA11544
Vibrio parahaemolyticus	670	PRJNA355206	355206	Proteobacteria	Gammaproteobacteria	5.27518	45.4	-	MSBY01	89	5099	4840	3/3/17	3/6/17	Contig	Monash University Malaysia	SAMN06066407	GCA_002013995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/995/GCA_002013995.1_ASM201399v1	-	MVP2
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.22841	28.8	-	FACC01	1306	3841	3633	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664141	GCA_900013345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/345/GCA_900013345.1_Peptoclostridium_difficile	-	-
Vibrio cholerae O1	127906	PRJNA327651	327651	Proteobacteria	Gammaproteobacteria	4.03298	47.5	-	MBQK01	195	3904	3642	11/1/16	3/28/17	Scaffold	"Emerging Pathogens Institute, University of Florida,"	SAMN05425594	GCA_001860285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/285/GCA_001860285.1_ASM186028v1	-	CMR008
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.10639	68.2	-	CFWL01	78	7334	6801	3/15/15	3/26/17	Scaffold	SC	SAMEA807012	GCA_001321165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/165/GCA_001321165.1_7907_5_27	-	C27
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.48049	50.9	-	CXDA01	406	4787	4002	7/16/15	3/5/17	Scaffold	SC	SAMEA954672	GCA_001258955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/955/GCA_001258955.1_5236_6_10	-	Sh1267_440938
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.15435	41	-	FIII01	90	2214	2038	2/10/16	3/19/17	Contig	SC	SAMEA1316680	GCA_900060955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/955/GCA_900060955.1_7114_5_85	-	LSS85
Streptococcus agalactiae	1311	PRJNA374635	374635	Terrabacteria group	Firmicutes	2.10698	35.2	-	MVFF01	30	2212	2057	8/1/17	8/21/17	Contig	Genomic Research Laboratory (GRL)	SAMN06329887	GCA_002239145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/145/GCA_002239145.1_ASM223914v1	-	L33
Acinetobacter baumannii 25307_5	1310869	PRJNA194946	194946	Proteobacteria	Gammaproteobacteria	4.03947	39.2	-	JFVT01	123	3988	3720	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570332	GCA_000589455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/455/GCA_000589455.1_ASM58945v1	-	25307_5
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.48002	66.5	-	CCPD01	68	6198	6023	9/5/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2733023	GCA_000824525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/525/GCA_000824525.1_LES_CF_sputum_CF03_contigs_19_a1	-	Liverpool Epidemic Strain
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15655	51.5	-	FEPM01	77	2528	2164	2/9/16	3/21/17	Scaffold	SC	SAMEA2673814	GCA_900030875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/875/GCA_900030875.1_14355_4_15	-	2842STDY5880972
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63468	38.9	-	FLQN01	69	1624	1488	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA4000276	GCA_900088345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/345/GCA_900088345.1_STT-1-2-12-Cm	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05831	39.6	-	CNRT02	180	2217	1987	3/23/15	3/15/17	Contig	SC	SAMEA1032599	GCA_001105285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/285/GCA_001105285.2_6999_2_17	-	R34-3223
Escherichia coli O104:H4 str. Ec11-9941	1240759	PRJNA76805	76805	Proteobacteria	Gammaproteobacteria	5.43495	50.7	-	AGWH01	15	5767	5348	12/11/12	2/22/17	Scaffold	Broad Institute	SAMN00771320	GCA_000320045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/320/045/GCA_000320045.1_Esch_coli_Ec_11-9941_V6	-	Ec 11-9941
Mycobacterium tuberculosis NRITLD20	1455294	PRJNA237416	237416	Terrabacteria group	Actinobacteria	4.40369	65.5	-	JJSH01	88	4358	4132	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628509	GCA_000657555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/555/GCA_000657555.1_Myco_tube_NRITLD20_V1	-	NRITLD20
Listeria monocytogenes	1639	PRJEB10756	310485	Terrabacteria group	Firmicutes	2.86312	37.8	-	CYVP01	15	2889	2824	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540858	GCA_001564975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/975/GCA_001564975.1_LM07-01345_assembly	-	LM07-01345
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.69165	30.2	-	MJYM01	133	1816	1633	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532381	GCA_001763315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/315/GCA_001763315.1_ASM176331v1	-	BCW_6475
Salmonella enterica subsp. enterica serovar Enteritidis str. 08-0627	1182761	PRJNA162761	162761	Proteobacteria	Gammaproteobacteria	4.72682	52.1	-	AKGA01	41	4864	4571	7/10/12	5/19/17	Contig	Centers for Disease Control & Prevention	SAMN02415221	GCA_000278545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/545/GCA_000278545.1_08-0627v1.0	-	08-0627
Staphylococcus aureus M1194	1402701	PRJNA220051	220051	Terrabacteria group	Firmicutes	2.89888	32.9	-	JAWV01	15	3048	2882	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02360858	GCA_000532875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/875/GCA_000532875.1_Stap_aure_M1194_V1	-	M1194
Staphylococcus aureus M1196	1402703	PRJNA220053	220053	Terrabacteria group	Firmicutes	2.87652	32.9	-	JAWU01	4	3019	2851	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02360860	GCA_000532895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/895/GCA_000532895.1_Stap_aure_M1196_V1	-	M1196
Salmonella enterica subsp. enterica serovar Enteritidis str. 622731-39	887064	PRJNA52615	52615	Proteobacteria	Gammaproteobacteria	4.72978	52	-	ALEI01	56	4861	4607	7/18/12	5/19/17	Contig	FDA	SAMN01041114	GCA_000280075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/075/GCA_000280075.1_ASM28007v1	23045502	622731-39
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.7506	30.4	-	MJYN01	49	1797	1656	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532382	GCA_001763335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/335/GCA_001763335.1_ASM176333v1	-	BCW_6476
Listeria monocytogenes	1639	PRJEB10757	310486	Terrabacteria group	Firmicutes	2.96529	37.7	-	CYVQ01	32	2989	2923	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540859	GCA_001564995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/995/GCA_001564995.1_LM07-01377_assembly	-	LM07-01377
Mycobacterium tuberculosis NRITLD21	1455295	PRJNA237417	237417	Terrabacteria group	Actinobacteria	4.3757	65.6	-	JJSG01	90	4316	4110	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628510	GCA_000657575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/575/GCA_000657575.1_Myco_tube_NRITLD21_V1	-	NRITLD21
Escherichia coli O104:H4 str. Ec11-4988	1240764	PRJNA81669	81669	Proteobacteria	Gammaproteobacteria	5.40393	50.6	-	AHOY01	15	5700	5295	12/11/12	2/22/17	Scaffold	Broad Institute	SAMN00778958	GCA_000320195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/320/195/GCA_000320195.1_Esch_coli_Ec11-4988_V1	-	Ec11-4988
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.1248	39.7	-	CMTA01	87	2274	1984	3/23/15	3/15/17	Contig	SC	SAMEA1022843	GCA_001105345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/345/GCA_001105345.1_5737_1_10	-	372
Helicobacter pylori	210	PRJEB13893	323443	Proteobacteria	delta/epsilon subdivisions	1.63727	38.9	-	FLQC01	75	1626	1489	6/14/16	3/28/17	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA4000274	GCA_900088355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/355/GCA_900088355.1_STT-1-2-10-Cm	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.20036	51.6	-	FEQR01	90	2574	2211	2/9/16	3/19/17	Scaffold	SC	SAMEA2674451	GCA_900030885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/885/GCA_900030885.1_14355_8_8	-	2842STDY5881733
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.45706	66.5	-	CCOC01	61	6177	6006	9/5/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2733024	GCA_000824545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/545/GCA_000824545.1_LES_CF_sputum_CF03_contigs_22_a1	-	Liverpool Epidemic Strain
Acinetobacter baumannii 24845_6	1310860	PRJNA194937	194937	Proteobacteria	Gammaproteobacteria	4.06703	39.1	-	JFWI01	125	4059	3751	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570315	GCA_000589475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/475/GCA_000589475.1_ASM58947v1	-	24845_6
Streptococcus agalactiae	1311	PRJNA374636	374636	Terrabacteria group	Firmicutes	2.16274	35.5	-	MVFG01	38	2295	2122	8/1/17	8/21/17	Contig	Genomic Research Laboratory (GRL)	SAMN06329888	GCA_002239175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/175/GCA_002239175.1_ASM223917v1	-	S06-135
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.11075	41.1	-	FIME01	22	2098	1996	2/10/16	3/19/17	Contig	SC	SAMEA1566026	GCA_900060965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/965/GCA_900060965.1_8337_6_1	-	BM178a
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.60091	50.7	-	CXGD01	367	5014	4428	7/16/15	2/24/17	Scaffold	SC	SAMEA1013679	GCA_001259015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/015/GCA_001259015.1_6551_1_11	-	SS130327_2798533
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08986	68.2	-	CIJQ01	72	7324	6799	4/21/15	3/27/17	Scaffold	SC	SAMEA807015	GCA_001321185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/185/GCA_001321185.1_7907_5_24	-	C24
Vibrio cholerae O1	127906	PRJNA327651	327651	Proteobacteria	Gammaproteobacteria	4.0293	47.5	-	MBQL01	204	3888	3652	11/1/16	3/28/17	Scaffold	"Emerging Pathogens Institute, University of Florida,"	SAMN05425605	GCA_001860295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/295/GCA_001860295.1_ASM186029v1	-	CMR009
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.2501	29.3	-	FACU01	1376	3919	3687	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664157	GCA_900013355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/355/GCA_900013355.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA355210	355210	Proteobacteria	Gammaproteobacteria	5.27075	45.4	-	MSBZ01	122	5157	4887	3/3/17	3/6/17	Contig	Monash University Malaysia	SAMN06066420	GCA_002014005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/005/GCA_002014005.1_ASM201400v1	-	MVP4
Klebsiella pneumoniae	573	PRJNA400683	400683	Proteobacteria	Gammaproteobacteria	5.59848	56.9	-	NTHS01	118	5691	4768	9/13/17	9/13/17	Scaffold	Christian Medical College	SAMN07572764	GCA_002300665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/665/GCA_002300665.1_ASM230066v1	-	BA2817
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.04574	37.7	-	FXEN01	154	3168	2912	4/26/17	5/6/17	Scaffold	SC	SAMEA3893548	GCA_900178655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/655/GCA_900178655.1_19789_6_120	-	VREN2349
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	0.844538	61.4	-	CGFZ01	1696	1215	1199	3/15/15	6/13/15	Scaffold	SC	SAMEA1931276	GCA_001330975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/975/GCA_001330975.1_3888_1_1	-	B287
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.7876	31.2	-	FBOO01	50	1859	1748	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683447	GCA_001497435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/435/GCA_001497435.1_H054000444	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.85728	64.1	-	CSWT01	42	4886	4735	3/24/15	3/18/17	Scaffold	SC	SAMEA1464892	GCA_001215065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/065/GCA_001215065.1_7396_7_41	-	PAP089
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.27757	64	-	CSYU01	37	5323	5113	3/24/15	3/18/17	Scaffold	SC	SAMEA1464922	GCA_001215165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/165/GCA_001215165.1_7396_8_92	-	PAP140
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75055	31.2	-	FBBF01	23	1845	1744	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683093	GCA_001497475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/475/GCA_001497475.1_EC6016	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.4246	66.9	-	CFZO01	1400	3522	3483	3/15/15	6/13/15	Scaffold	SC	SAMEA1931351	GCA_001331075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/075/GCA_001331075.1_5463_7_4	-	B202
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.17181	37.4	-	FXFR01	161	3309	3091	4/26/17	5/6/17	Scaffold	SC	SAMEA3893509	GCA_900178665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/665/GCA_900178665.1_19789_6_104	-	VREN1980
Klebsiella pneumoniae	573	PRJNA400676	400676	Proteobacteria	Gammaproteobacteria	5.79574	56.8	-	NTHQ01	1312	6001	4662	9/13/17	9/13/17	Scaffold	Christian Medical College	SAMN07572687	GCA_002300675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/675/GCA_002300675.1_ASM230067v1	-	VBA2172
Vibrio parahaemolyticus	670	PRJNA355220	355220	Proteobacteria	Gammaproteobacteria	4.96766	45.5	-	MSCB01	115	4828	4603	3/3/17	3/6/17	Contig	Monash University Malaysia	SAMN06066439	GCA_002014015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/015/GCA_002014015.1_ASM201401v1	-	MVP9
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.14507	28.4	-	FANW01	486	3840	3710	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664447	GCA_900013395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/395/GCA_900013395.1_Peptoclostridium_difficile	-	-
Vibrio cholerae O1	127906	PRJNA327651	327651	Proteobacteria	Gammaproteobacteria	4.03599	47.5	-	MBQM01	377	3906	3590	11/1/16	3/28/17	Scaffold	"Emerging Pathogens Institute, University of Florida,"	SAMN05425712	GCA_001860315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/315/GCA_001860315.1_ASM186031v1	-	CMR010
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08819	68.2	-	CGHT01	78	7304	6786	3/15/15	3/27/17	Scaffold	SC	SAMEA807016	GCA_001321205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/205/GCA_001321205.1_7907_5_23	-	C23
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.92605	50.4	-	CWZJ01	439	5591	4758	7/16/15	2/24/17	Scaffold	SC	SAMEA2445742	GCA_001259035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/035/GCA_001259035.1_12971_8_52	-	H140360432
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	1.98173	41.2	-	FIMH01	21	1999	1877	2/10/16	3/19/17	Contig	SC	SAMEA1566203	GCA_900060975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/975/GCA_900060975.1_8337_6_3	-	BM191a
Streptococcus agalactiae	1311	PRJNA374637	374637	Terrabacteria group	Firmicutes	2.06872	35.4	-	MVFH01	34	2126	1960	8/1/17	8/21/17	Contig	Genomic Research Laboratory (GRL)	SAMN06329889	GCA_002239185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/185/GCA_002239185.1_ASM223918v1	-	S12-111
Acinetobacter baumannii 24845_1	1310855	PRJNA194932	194932	Proteobacteria	Gammaproteobacteria	4.09342	39.1	-	JFWM01	84	4075	3821	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570311	GCA_000589495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/495/GCA_000589495.1_ASM58949v1	-	24845_1
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.45704	66.5	-	CCOQ01	68	6177	6004	9/6/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2733025	GCA_000824565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/565/GCA_000824565.1_LES_CF_sputum_CF03_contigs_27_a1	-	Liverpool Epidemic Strain
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15179	51.6	-	FERB01	103	2503	2150	2/9/16	3/21/17	Scaffold	SC	SAMEA2673868	GCA_900030895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/895/GCA_900030895.1_14355_4_32	-	2842STDY5880989
Helicobacter pylori	210	PRJNA252946	252946	Proteobacteria	delta/epsilon subdivisions	1.6382	39	-	JOKW01	54	1631	1458	7/17/14	3/24/17	Scaffold	Universidad de Ciencias Aplicadas y Ambientales U.D.C.A	SAMN02864842	GCA_000730525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/730/525/GCA_000730525.1_ASM73052v1	25858838	Col2025
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.11196	39.7	-	CLZB01	63	2346	2139	3/21/15	3/4/17	Contig	SC	SAMEA1029036	GCA_001105425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/425/GCA_001105425.1_6983_8_76	-	SMRU2380
Escherichia coli O104:H4 str. Ec11-5603	1240765	PRJNA81671	81671	Proteobacteria	Gammaproteobacteria	5.42451	50.6	-	AHOZ01	10	5719	5328	12/11/12	2/22/17	Scaffold	Broad Institute	SAMN00778959	GCA_000320215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/320/215/GCA_000320215.1_Esch_coli_Ec11-5603_V1	-	Ec11-5603
Mycobacterium tuberculosis NRITLD31	1455305	PRJNA237427	237427	Terrabacteria group	Actinobacteria	4.39182	65.6	-	JJSE01	69	4308	4103	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628520	GCA_000657595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/595/GCA_000657595.1_Myco_tube_NRITLD31_V1	-	NRITLD31
Listeria monocytogenes	1639	PRJEB10758	310487	Terrabacteria group	Firmicutes	3.04983	37.8	-	CYVR01	51	3113	3033	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540860	GCA_001565015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/015/GCA_001565015.1_LM07-01398_assembly	-	LM07-01398
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.684	30.4	-	MJYO01	40	1761	1533	10/4/16	4/21/17	Contig	University of California at Davis	SAMN04532387	GCA_001763355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/355/GCA_001763355.1_ASM176335v1	-	BCW_6880
Salmonella enterica subsp. enterica serovar Enteritidis str. 639016-6	887065	PRJNA52617	52617	Proteobacteria	Gammaproteobacteria	4.72974	52	-	ALEJ01	52	4860	4606	7/18/12	5/19/17	Contig	FDA	SAMN01041120	GCA_000280095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/095/GCA_000280095.1_ASM28009v1	23045502	639016-6
Staphylococcus aureus M1240	1402737	PRJNA220087	220087	Terrabacteria group	Firmicutes	2.8954	32.9	-	JAWT01	27	3051	2875	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02360894	GCA_000532915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/915/GCA_000532915.1_Stap_aure_M1240_V1	-	M1240
Staphylococcus aureus M1287	1402773	PRJNA220123	220123	Terrabacteria group	Firmicutes	2.89665	33	-	JAWS01	16	3022	2863	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02360930	GCA_000532935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/935/GCA_000532935.1_Stap_aure_M1287_V1	-	M1287
Salmonella enterica subsp. enterica serovar Enteritidis str. 640631	887066	PRJNA52619	52619	Proteobacteria	Gammaproteobacteria	4.69077	52.1	-	ALEK01	45	4808	4559	7/18/12	5/19/17	Contig	FDA	SAMN01041123	GCA_000280115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/115/GCA_000280115.1_ASM28011v1	23045502	640631
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.78521	30.1	-	MJYQ01	90	1849	1659	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532388	GCA_001763385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/385/GCA_001763385.1_ASM176338v1	-	BCW_6881
Listeria monocytogenes	1639	PRJEB10759	310488	Terrabacteria group	Firmicutes	2.91925	37.8	-	CYVT01	17	2981	2907	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540861	GCA_001565035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/035/GCA_001565035.1_LM07-01481_assembly	-	LM07-01481
Mycobacterium tuberculosis NRITLD33	1455307	PRJNA237429	237429	Terrabacteria group	Actinobacteria	4.43233	65.5	-	JJSD01	32	4329	4111	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628522	GCA_000657615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/615/GCA_000657615.1_Myco_tube_NRITLD33_V1	-	NRITLD33
Escherichia coli O104:H4 str. Ec11-6006	1240767	PRJNA81673	81673	Proteobacteria	Gammaproteobacteria	5.41957	50.6	-	AHPA01	14	5706	5318	12/11/12	2/22/17	Scaffold	Broad Institute	SAMN00778960	GCA_000320235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/320/235/GCA_000320235.1_Esch_coli_Ec11-6006_V1	-	Ec11-6006
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.22431	39.8	-	CLRJ01	85	2497	2258	3/21/15	3/4/17	Contig	SC	SAMEA1028929	GCA_001105445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/445/GCA_001105445.1_6972_3_1	-	SMRU2569
Helicobacter pylori	210	PRJNA257764	257764	Proteobacteria	delta/epsilon subdivisions	1.60983	38.8	-	JPXC01	11	1598	1422	8/14/14	3/24/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese centre for disease control and prevention"	SAMN02978810	GCA_000740095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/095/GCA_000740095.1_ASM74009v1	25799515	YN1-91
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11162	51.8	-	FERD01	76	2481	2143	2/9/16	3/19/17	Scaffold	SC	SAMEA2673888	GCA_900030905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/905/GCA_900030905.1_14355_4_38	-	2842STDY5880995
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.45727	66.5	-	CCOS01	61	6174	6006	9/5/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2733026	GCA_000824585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/585/GCA_000824585.1_LES_CF_sputum_CF03_contigs_30_a1	-	Liverpool Epidemic Strain
Acinetobacter baumannii 25253_1	1310875	PRJNA194952	194952	Proteobacteria	Gammaproteobacteria	4.02329	39.2	-	JFWD01	95	3976	3723	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570318	GCA_000589515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/515/GCA_000589515.1_ASM58951v1	-	25253_1
Streptococcus agalactiae	1311	PRJNA374639	374639	Terrabacteria group	Firmicutes	2.05987	35.3	-	MVFJ01	40	2177	2007	8/1/17	8/21/17	Contig	Genomic Research Laboratory (GRL)	SAMN06329891	GCA_002239205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/205/GCA_002239205.1_ASM223920v1	-	S11-219
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05824	41.1	-	FIMJ01	23	2077	1972	2/10/16	3/19/17	Contig	SC	SAMEA1566152	GCA_900060985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/985/GCA_900060985.1_8337_6_6	-	BM203a
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.75506	50.7	-	CWWJ01	404	5306	4539	7/16/15	2/24/17	Scaffold	SC	SAMEA3345102	GCA_001259075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/075/GCA_001259075.1_Sg_201405302_CGGAAT_L001	-	201405302_1
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08477	68.2	-	CFWQ01	68	7306	6790	3/15/15	3/27/17	Scaffold	SC	SAMEA807019	GCA_001321225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/225/GCA_001321225.1_7909_4_31	-	C64
Vibrio cholerae O1	127906	PRJNA327651	327651	Proteobacteria	Gammaproteobacteria	4.02415	47.5	-	MBQN01	688	3944	3540	11/1/16	3/28/17	Scaffold	"Emerging Pathogens Institute, University of Florida,"	SAMN05425716	GCA_001860345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/345/GCA_001860345.1_ASM186034v1	-	CMR011
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.77147	30.3	-	FACG01	1091	4573	4311	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664143	GCA_900013605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/605/GCA_900013605.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA355216	355216	Proteobacteria	Gammaproteobacteria	5.19599	45.5	-	MSCA01	190	5017	4772	3/3/17	3/6/17	Contig	Monash University Malaysia	SAMN06066428	GCA_002014055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/055/GCA_002014055.1_ASM201405v1	-	MVP6
Klebsiella pneumoniae	573	PRJNA400692	400692	Proteobacteria	Gammaproteobacteria	5.38799	57.4	-	NTHT01	82	5471	5185	9/13/17	9/15/17	Scaffold	Federal University of Uberlandia	SAMN07572879	GCA_002300715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/715/GCA_002300715.1_ASM230071v1	-	B03
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.19645	37.4	-	FXFG01	167	3348	3093	4/26/17	5/6/17	Scaffold	SC	SAMEA3893876	GCA_900178675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/675/GCA_900178675.1_19789_5_40	-	VREN2170
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.59658	67.2	-	CGAF01	1191	3614	3561	3/15/15	6/14/15	Scaffold	SC	SAMEA1931352	GCA_001331095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/095/GCA_001331095.1_5463_7_2	-	B144
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.81273	31.1	-	FAYR01	80	1888	1754	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683028	GCA_001497615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/615/GCA_001497615.1_W17A	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82445	64.2	-	CSYN01	74	4857	4688	3/24/15	3/18/17	Scaffold	SC	SAMEA1464874	GCA_001215205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/205/GCA_001215205.1_7396_8_87	-	PAP135
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.1557	64.1	-	CSZB01	23	5264	5008	3/24/15	3/18/17	Scaffold	SC	SAMEA1317701	GCA_001215225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/225/GCA_001215225.1_7520_7_30	-	PAP150
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.63843	31.4	-	FBAK01	15	1695	1603	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683062	GCA_001497655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/655/GCA_001497655.1_p494B	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.41059	65.9	-	CGFF01	1261	3820	3783	3/15/15	6/13/15	Scaffold	SC	SAMEA1931718	GCA_001331115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/115/GCA_001331115.1_5463_3_6	-	B161
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.97002	37.7	-	FXFD01	152	3125	2869	4/26/17	5/6/17	Scaffold	SC	SAMEA3893586	GCA_900178685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/685/GCA_900178685.1_19789_6_137	-	VREN2833
Klebsiella pneumoniae	573	PRJNA400699	400699	Proteobacteria	Gammaproteobacteria	5.29024	57.4	-	NTHU01	75	5397	5078	9/13/17	9/15/17	Scaffold	Federal University of Uberlandia	SAMN07572976	GCA_002300725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/725/GCA_002300725.1_ASM230072v1	-	B11
Vibrio parahaemolyticus	670	PRJNA345108	345108	Proteobacteria	Gammaproteobacteria	4.96796	45.4	-	MKQT01	209	4784	4295	3/6/17	3/9/17	Contig	Universidad Autonoma de Chile	SAMN05858282	GCA_002018535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/535/GCA_002018535.1_ASM201853v1	-	PMA2.15
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.19742	28.8	-	FAFH01	1474	3874	3671	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664225	GCA_900013615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/615/GCA_900013615.1_Peptoclostridium_difficile	-	-
Vibrio cholerae O1	127906	PRJNA327651	327651	Proteobacteria	Gammaproteobacteria	4.0278	47.5	-	MBQO01	199	3883	3660	11/1/16	3/28/17	Scaffold	"Emerging Pathogens Institute, University of Florida,"	SAMN05425724	GCA_001860365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/365/GCA_001860365.1_ASM186036v1	-	CMR012
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08772	68.2	-	CIBB01	69	7313	6787	4/21/15	3/26/17	Scaffold	SC	SAMEA807020	GCA_001321245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/245/GCA_001321245.1_7909_4_30	-	C63
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.77919	50.7	-	CXLD01	420	5343	4625	7/16/15	2/24/17	Scaffold	SC	SAMEA2164634	GCA_001259115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/115/GCA_001259115.1_8290_4_88	-	124332
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	1.99149	41.2	-	FIMK01	30	2012	1895	2/10/16	3/19/17	Contig	SC	SAMEA1566174	GCA_900060995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/995/GCA_900060995.1_8337_6_7	-	BM209a
Streptococcus agalactiae	1311	PRJNA374645	374645	Terrabacteria group	Firmicutes	2.22325	35.5	-	MVFO01	70	2367	2152	8/1/17	8/21/17	Contig	Genomic Research Laboratory (GRL)	SAMN06329896	GCA_002239235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/235/GCA_002239235.1_ASM223923v1	-	S10-201
Acinetobacter baumannii 25253_10	1310884	PRJNA194961	194961	Proteobacteria	Gammaproteobacteria	4.00375	39.2	-	JFWE01	92	3964	3696	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570320	GCA_000589535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/535/GCA_000589535.1_ASM58953v1	-	25253_10
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.46192	66.5	-	CCPJ01	74	6180	6004	9/6/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2733076	GCA_000824605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/605/GCA_000824605.1_LES_CF_sputum_CF03_contigs_4_a1	-	Liverpool Epidemic Strain
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11217	51.8	-	FERP01	68	2456	2113	2/9/16	3/21/17	Scaffold	SC	SAMEA2673954	GCA_900030915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/915/GCA_900030915.1_14355_4_58	-	2842STDY5881015
Helicobacter pylori	210	PRJNA257763	257763	Proteobacteria	delta/epsilon subdivisions	1.6334	38.8	-	JPXD01	9	1612	1425	8/14/14	3/24/17	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese centre for disease control and prevention"	SAMN02978809	GCA_000740115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/115/GCA_000740115.1_ASM74011v1	25799515	YN4-84
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14391	39.5	-	CKAX01	62	2369	2110	3/21/15	3/4/17	Contig	SC	SAMEA974630	GCA_001105485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/485/GCA_001105485.1_6259_7_18	-	type strain: N
Escherichia coli O104:H4 str. Ec12-0465	1240778	PRJNA88163	88163	Proteobacteria	Gammaproteobacteria	5.30352	50.7	-	AIPQ01	9	5595	5180	12/11/12	2/22/17	Scaffold	Broad Institute	SAMN00809012	GCA_000320255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/320/255/GCA_000320255.1_Esch_coli_Ec12-0465_V1	-	Ec12-0465
Mycobacterium tuberculosis NRITLD34	1455308	PRJNA237430	237430	Terrabacteria group	Actinobacteria	4.41611	65.6	-	JJSC01	32	4314	4120	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628523	GCA_000657635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/635/GCA_000657635.1_Myco_tube_NRITLD34_V1	-	NRITLD34
Listeria monocytogenes	1639	PRJEB10760	310489	Terrabacteria group	Firmicutes	2.94497	37.8	-	CYVU01	36	3031	2931	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540862	GCA_001565055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/055/GCA_001565055.1_LM07414_assembly	-	LM07414
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.88302	30.2	-	MJYR01	85	1980	1780	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532389	GCA_001763415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/415/GCA_001763415.1_ASM176341v1	-	BCW_6882
Salmonella enterica subsp. enterica serovar Enteritidis str. 77-0424	891411	PRJNA53259	53259	Proteobacteria	Gammaproteobacteria	4.69382	52.1	-	ALEL01	43	4812	4563	7/18/12	5/19/17	Contig	FDA	SAMN01041142	GCA_000280135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/135/GCA_000280135.1_ASM28013v1	23045502	77-0424
Staphylococcus aureus M1294	1402779	PRJNA220129	220129	Terrabacteria group	Firmicutes	2.9683	32.9	-	JAWR01	5	3151	2976	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02360936	GCA_000532955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/955/GCA_000532955.1_Stap_aure_M1294_V1	-	M1294
Staphylococcus aureus M1299	1402784	PRJNA220134	220134	Terrabacteria group	Firmicutes	2.95467	33	-	JAWQ01	20	3108	2934	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02360941	GCA_000532975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/975/GCA_000532975.1_Stap_aure_M1299_V1	-	M1299
Salmonella enterica subsp. enterica serovar Enteritidis str. 607307-6	891413	PRJNA53263	53263	Proteobacteria	Gammaproteobacteria	4.72907	52	-	ALEM01	52	4854	4589	7/18/12	5/19/17	Contig	FDA	SAMN01041109	GCA_000280155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/155/GCA_000280155.1_ASM28015v1	23045502	607307-6
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.8666	29.9	-	MJYS01	82	1965	1790	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532390	GCA_001763435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/435/GCA_001763435.1_ASM176343v1	-	BCW_6883
Listeria monocytogenes	1639	PRJEB10761	310490	Terrabacteria group	Firmicutes	2.98634	37.8	-	CYVW01	36	3077	2980	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540863	GCA_001565075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/075/GCA_001565075.1_LM07416_assembly	-	LM07416
Mycobacterium tuberculosis NRITLD37	1455311	PRJNA237433	237433	Terrabacteria group	Actinobacteria	4.43229	65.5	-	JJSB01	87	4370	4109	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628526	GCA_000657655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/655/GCA_000657655.1_Myco_tube_NRITLD37_V1	-	NRITLD37
Escherichia coli O104:H4 str. Ec12-0466	1240779	PRJNA88165	88165	Proteobacteria	Gammaproteobacteria	5.47465	50.7	-	AIPR01	13	5788	5360	12/11/12	2/22/17	Scaffold	Broad Institute	SAMN00809013	GCA_000320275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/320/275/GCA_000320275.1_Esch_coli_Ec12-0466_V1	-	Ec12-0466
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05364	39.6	-	COAX02	151	2205	1982	3/22/15	3/15/17	Contig	SC	SAMEA1463059	GCA_001105505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/505/GCA_001105505.2_7622_2_27	-	BR1082
Helicobacter pylori	210	PRJNA265819	265819	Proteobacteria	delta/epsilon subdivisions	1.58865	39.1	-	JSUZ01	59	1586	1413	12/16/14	3/25/17	Scaffold	"National Institute of Health, Portugal"	SAMN03153300	GCA_000802445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/445/GCA_000802445.1_ASM80244v1	25657274	1152/04
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.1449	51.5	-	FERQ01	87	2483	2129	2/9/16	3/21/17	Scaffold	SC	SAMEA2673963	GCA_900030925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/925/GCA_900030925.1_14355_4_61	-	2842STDY5881018
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.45639	66.5	-	CCPI01	66	6177	6003	9/5/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2733077	GCA_000824625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/625/GCA_000824625.1_LES_CF_sputum_CF03_contigs_7_a1	-	Liverpool Epidemic Strain
Acinetobacter baumannii 25253_3	1310877	PRJNA194954	194954	Proteobacteria	Gammaproteobacteria	3.98954	39.2	-	JFWC01	87	3938	3694	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570321	GCA_000589555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/555/GCA_000589555.1_ASM58955v1	-	25253_3
Streptococcus agalactiae	1311	PRJNA374646	374646	Terrabacteria group	Firmicutes	2.07695	35.3	-	MVFP01	24	2160	2018	8/1/17	8/21/17	Contig	Genomic Research Laboratory (GRL)	SAMN06329897	GCA_002239245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/245/GCA_002239245.1_ASM223924v1	-	S08-66
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05983	41.1	-	FINL01	20	2080	1950	2/10/16	3/19/17	Contig	SC	SAMEA1566081	GCA_900061005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/005/GCA_900061005.1_8337_6_34	-	BM373a
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.18651	50.8	-	CXDH01	359	4425	3968	7/16/15	2/24/17	Scaffold	SC	SAMEA954677	GCA_001259155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/155/GCA_001259155.1_5236_7_2	-	Sh2073_441039
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08231	68.2	-	CFZI01	66	7295	6781	3/15/15	3/27/17	Scaffold	SC	SAMEA807022	GCA_001321265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/265/GCA_001321265.1_7909_4_32	-	C65
Vibrio cholerae O1	127906	PRJNA327651	327651	Proteobacteria	Gammaproteobacteria	4.03467	47.5	-	MBQP01	161	3894	3671	11/1/16	3/28/17	Scaffold	"Emerging Pathogens Institute, University of Florida,"	SAMN05426682	GCA_001860385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/385/GCA_001860385.1_ASM186038v1	-	CMR013
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.25878	29.1	-	FAFM01	1580	3867	3706	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664229	GCA_900013625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/625/GCA_900013625.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA345109	345109	Proteobacteria	Gammaproteobacteria	5.03515	45.3	-	MKQU01	80	4840	4495	3/6/17	3/9/17	Contig	Universidad Autonoma de Chile	SAMN05858283	GCA_002018555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/555/GCA_002018555.1_ASM201855v1	-	PMA3.15
Klebsiella pneumoniae	573	PRJNA400776	400776	Proteobacteria	Gammaproteobacteria	5.45011	57.4	-	NTHW01	82	5578	5247	9/13/17	9/15/17	Scaffold	Federal University of Uberlandia	SAMN07573090	GCA_002300755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/755/GCA_002300755.1_ASM230075v1	-	B29
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.19499	37.4	-	FXER01	170	3338	3092	4/26/17	5/6/17	Scaffold	SC	SAMEA3893877	GCA_900178695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/695/GCA_900178695.1_19789_5_41	-	VREN2305
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.49211	65.2	-	CGHH01	978	4063	4023	3/15/15	6/14/15	Scaffold	SC	SAMEA1931806	GCA_001331195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/195/GCA_001331195.1_5463_7_6	-	B154
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75402	31.1	-	FBKK01	32	1822	1697	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683339	GCA_001497675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/675/GCA_001497675.1_p588B	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16433	64.1	-	CSXA01	37	5272	5082	3/24/15	3/18/17	Scaffold	SC	SAMEA1464897	GCA_001215245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/245/GCA_001215245.1_7396_7_7	-	PAP055
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18533	64.2	-	CSYK01	55	5194	5028	3/24/15	3/18/17	Scaffold	SC	SAMEA1464904	GCA_001215265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/265/GCA_001215265.1_7396_8_84	-	PAP132
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66205	31.5	-	FBQM01	41	1681	1593	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683495	GCA_001497695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/695/GCA_001497695.1_H133380250	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.5918	66.8	-	CFYW01	966	3597	3550	3/15/15	6/13/15	Scaffold	SC	SAMEA2015294	GCA_001331315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/315/GCA_001331315.1_5463_6_6	-	B107
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.17377	37.4	-	FXES01	160	3293	3090	4/26/17	5/6/17	Scaffold	SC	SAMEA3893874	GCA_900178705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/705/GCA_900178705.1_19789_5_38	-	VREN1835
Klebsiella pneumoniae	573	PRJNA400780	400780	Proteobacteria	Gammaproteobacteria	5.28369	57.2	-	NTHY01	82	5366	5079	9/13/17	9/15/17	Scaffold	Federal University of Uberlandia	SAMN07573093	GCA_002300765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/765/GCA_002300765.1_ASM230076v1	-	B35
Vibrio parahaemolyticus	670	PRJNA345107	345107	Proteobacteria	Gammaproteobacteria	5.23176	45.2	-	MKQV01	130	5091	4409	3/6/17	3/9/17	Contig	Universidad Autonoma de Chile	SAMN05858281	GCA_002018615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/615/GCA_002018615.1_ASM201861v1	-	PMA1.15
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.16725	28.5	-	FAFS01	756	3792	3646	3/31/16	4/10/17	Contig	UNIVERSITE LAVAL	SAMEA3664233	GCA_900013635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/635/GCA_900013635.1_Peptoclostridium_difficile	-	-
Vibrio cholerae O1	127906	PRJNA327651	327651	Proteobacteria	Gammaproteobacteria	4.04262	47.5	-	MBQQ01	467	3959	3609	11/1/16	3/28/17	Scaffold	"Emerging Pathogens Institute, University of Florida,"	SAMN05426768	GCA_001860395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/395/GCA_001860395.1_ASM186039v1	-	CMR014
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08195	68.2	-	CGFW01	68	7312	6788	3/15/15	3/27/17	Scaffold	SC	SAMEA807024	GCA_001321285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/285/GCA_001321285.1_7910_5_1	-	C67
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.35368	50.8	-	CXBF01	364	4628	4161	7/16/15	2/24/17	Scaffold	SC	SAMEA954638	GCA_001259175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/175/GCA_001259175.1_5008_8_9	-	ShIB687_401085
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05312	41.1	-	FINN01	18	2062	1954	2/10/16	3/19/17	Contig	SC	SAMEA1566087	GCA_900061015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/015/GCA_900061015.1_8337_6_35	-	BM411a
Streptococcus agalactiae	1311	PRJNA374638	374638	Terrabacteria group	Firmicutes	2.06002	35.4	-	MVFI01	32	2148	2001	8/1/17	8/21/17	Contig	Genomic Research Laboratory (GRL)	SAMN06329890	GCA_002239265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/265/GCA_002239265.1_ASM223926v1	-	S13-156
Acinetobacter baumannii 25253_4	1310878	PRJNA194955	194955	Proteobacteria	Gammaproteobacteria	4.01754	39.3	-	JFWB01	92	3940	3689	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570322	GCA_000589575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/575/GCA_000589575.1_ASM58957v1	-	25253_4
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.46118	66.5	-	CCOG01	75	6178	6001	9/5/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2733078	GCA_000824645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/645/GCA_000824645.1_LES_CF_sputum_CF03_contigs_12_a1	-	Liverpool Epidemic Strain
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.14633	51.6	-	FESC01	90	2495	2149	2/9/16	3/21/17	Scaffold	SC	SAMEA2674049	GCA_900030935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/935/GCA_900030935.1_14355_4_94	-	2842STDY5881051
Helicobacter pylori	210	PRJNA265204	265204	Proteobacteria	delta/epsilon subdivisions	1.58716	39.1	-	JSUY01	62	1588	1423	12/16/14	3/25/17	Scaffold	"National Institute of Health, Portugal"	SAMN03151583	GCA_000802455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/455/GCA_000802455.1_ASM80245v1	25657274	1089/03
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04874	39.6	-	CNYH02	190	2191	1977	3/22/15	3/11/17	Contig	SC	SAMEA1463023	GCA_001105565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/565/GCA_001105565.2_7553_4_21	-	ND6142
Escherichia coli KTE85	1169364	PRJNA157647	157647	Proteobacteria	Gammaproteobacteria	5.36045	50.6	-	ANYU01	173	5710	5284	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00847682	GCA_000326885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/885/GCA_000326885.1_Esch_coli_KTE85_V1	-	KTE85
Mycobacterium tuberculosis NRITLD38	1455312	PRJNA237434	237434	Terrabacteria group	Actinobacteria	4.41635	65.5	-	JJSA01	9	4297	4099	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02628527	GCA_000657675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/675/GCA_000657675.1_Myco_tube_NRITLD38_V1	-	NRITLD38
Listeria monocytogenes	1639	PRJEB10762	310491	Terrabacteria group	Firmicutes	2.98797	37.7	-	CYVX01	37	3048	2941	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540864	GCA_001565095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/095/GCA_001565095.1_LM07420_assembly	-	LM07420
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.74092	30.1	-	MJYT01	85	1819	1675	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532392	GCA_001763445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/445/GCA_001763445.1_ASM176344v1	-	BCW_6885
Salmonella enterica subsp. enterica serovar Enteritidis str. 485549-17	910413	PRJNA59531	59531	Proteobacteria	Gammaproteobacteria	4.69808	52.1	-	ALEN01	39	4807	4565	7/18/12	5/19/17	Contig	FDA	SAMN01041093	GCA_000280175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/175/GCA_000280175.1_ASM28017v1	23045502	485549-17
Staphylococcus aureus M1300	1402785	PRJNA220135	220135	Terrabacteria group	Firmicutes	2.86482	32.8	-	JAWP01	24	3024	2869	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02360942	GCA_000532995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/532/995/GCA_000532995.1_Stap_aure_M1300_V1	-	M1300
Staphylococcus aureus M1342	1403838	PRJNA221384	221384	Terrabacteria group	Firmicutes	2.88995	33	-	JAWO01	12	3023	2855	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02363977	GCA_000533015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/015/GCA_000533015.1_Stap_aure_M1342_V1	-	M1342
Salmonella enterica subsp. enterica serovar Enteritidis str. 596866-22	910414	PRJNA59533	59533	Proteobacteria	Gammaproteobacteria	4.69409	52.1	-	ALEO01	38	4807	4563	7/18/12	5/19/17	Contig	FDA	SAMN01041105	GCA_000280195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/195/GCA_000280195.1_ASM28019v1	23045502	596866-22
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.72913	30.1	-	MJYU01	114	1788	1646	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532393	GCA_001763475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/475/GCA_001763475.1_ASM176347v1	-	BCW_6886
Listeria monocytogenes	1639	PRJEB10763	310492	Terrabacteria group	Firmicutes	2.98878	37.7	-	CYWA01	36	3052	2946	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540865	GCA_001565115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/115/GCA_001565115.1_LM07421_assembly	-	LM07421
Mycobacterium tuberculosis TB_RSA77	1421993	PRJNA228071	228071	Terrabacteria group	Actinobacteria	4.42264	65.5	-	JKUP01	6	4294	4120	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403518	GCA_000658835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/835/GCA_000658835.1_Myco_tube_TB_RSA77_V1	-	TB_RSA77
Escherichia coli KTE167	1169398	PRJNA157715	157715	Proteobacteria	Gammaproteobacteria	4.97344	50.4	-	ANYL01	108	5135	4801	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00847716	GCA_000326905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/905/GCA_000326905.1_Esch_coli_KTE167_V1	-	KTE167
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04212	39.5	-	CNXE02	166	2184	1995	3/23/15	3/11/17	Contig	SC	SAMEA1032721	GCA_001105605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/605/GCA_001105605.2_7001_3_14	-	R34-3150
Helicobacter pylori	210	PRJNA265826	265826	Proteobacteria	delta/epsilon subdivisions	1.61834	39	-	JSXT01	57	1596	1446	12/16/14	3/25/17	Scaffold	"National Institute of Health, Portugal"	SAMN03153477	GCA_000802465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/465/GCA_000802465.1_ASM80246v1	25657274	1198/04
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11551	51.7	-	FESE01	74	2458	2135	2/9/16	3/19/17	Scaffold	SC	SAMEA2673769	GCA_900030945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/945/GCA_900030945.1_14355_5_1	-	2842STDY5881054
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.45702	66.5	-	CCOX01	59	6173	6005	9/5/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2733096	GCA_000824665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/665/GCA_000824665.1_LES_CF_sputum_CF03_contigs_34_a1	-	Liverpool Epidemic Strain
Acinetobacter baumannii 25253_5	1310879	PRJNA194956	194956	Proteobacteria	Gammaproteobacteria	4.031	39.2	-	JFWA01	156	3965	3648	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570323	GCA_000589595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/595/GCA_000589595.1_ASM58959v1	-	25253_5
Streptococcus agalactiae	1311	PRJNA374641	374641	Terrabacteria group	Firmicutes	2.16266	35.5	-	MVFK01	33	2275	2116	8/1/17	8/21/17	Contig	Genomic Research Laboratory (GRL)	SAMN06329892	GCA_002239285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/285/GCA_002239285.1_ASM223928v1	-	S13-129
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04736	41.2	-	FINO01	20	2060	1950	2/10/16	3/19/17	Contig	SC	SAMEA1566108	GCA_900061025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/025/GCA_900061025.1_8337_6_37	-	BM424a
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.53117	50.5	-	CXCL01	394	4843	4327	7/16/15	2/24/17	Scaffold	SC	SAMEA954770	GCA_001259195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/195/GCA_001259195.1_5236_3_8	-	ShIB3300_440832
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.0873	68.2	-	CGFJ01	70	7305	6790	3/15/15	3/26/17	Scaffold	SC	SAMEA807028	GCA_001321305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/305/GCA_001321305.1_7907_5_14	-	C14
Vibrio cholerae O1	127906	PRJNA327651	327651	Proteobacteria	Gammaproteobacteria	4.02762	47.5	-	MBQR01	270	3898	3639	11/1/16	3/28/17	Scaffold	"Emerging Pathogens Institute, University of Florida,"	SAMN05426804	GCA_001860425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/425/GCA_001860425.1_ASM186042v1	-	CMR015
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.12707	28.7	-	FAFR01	756	3767	3634	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664234	GCA_900013645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/645/GCA_900013645.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA345099	345099	Proteobacteria	Gammaproteobacteria	5.13011	45.3	-	MKQW01	48	4954	4589	3/6/17	3/9/17	Contig	Universidad Autonoma de Chile	SAMN05858273	GCA_002018625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/625/GCA_002018625.1_ASM201862v1	-	PMA37.5
Klebsiella pneumoniae	573	PRJNA400774	400774	Proteobacteria	Gammaproteobacteria	5.36801	57.3	-	NTHV01	61	5426	5141	9/13/17	9/15/17	Scaffold	Federal University of Uberlandia	SAMN07573055	GCA_002300775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/775/GCA_002300775.1_ASM230077v1	-	B17
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.98344	37.7	-	FXGA01	155	3105	2878	4/26/17	5/6/17	Scaffold	SC	SAMEA3893554	GCA_900178715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/715/GCA_900178715.1_19789_6_123	-	VREN2655
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.56995	67.2	-	CGHV01	1392	3604	3554	3/15/15	6/13/15	Scaffold	SC	SAMEA751133	GCA_001331455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/331/455/GCA_001331455.1_5515_8_2	-	B094
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68411	31.3	-	FAYC01	13	1742	1638	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683023	GCA_001497735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/735/GCA_001497735.1_H102240161	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.17035	64.1	-	CSXP01	30	5280	5080	3/24/15	3/18/17	Scaffold	SC	SAMEA1464859	GCA_001215285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/285/GCA_001215285.1_7396_8_61	-	PAP109
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16261	64.1	-	CSYG01	35	5274	5074	3/24/15	3/18/17	Scaffold	SC	SAMEA1464895	GCA_001215305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/305/GCA_001215305.1_7396_8_78	-	PAP126
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.83812	31	-	FBOU01	81	1918	1796	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683429	GCA_001497775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/775/GCA_001497775.1_H132760142	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.33414	62.1	-	CFYE01	1209	4999	4959	3/15/15	6/12/15	Scaffold	SC	SAMEA751218	GCA_001332075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/075/GCA_001332075.1_5601_1_9	-	B054
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.98389	37.7	-	FXFT01	153	3087	2878	4/26/17	5/6/17	Scaffold	SC	SAMEA3893580	GCA_900178725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/725/GCA_900178725.1_19789_6_134	-	VREN2830
Klebsiella pneumoniae	573	PRJNA400778	400778	Proteobacteria	Gammaproteobacteria	5.29121	57.5	-	NTHX01	93	5380	5082	9/13/17	9/15/17	Scaffold	Federal University of Uberlandia	SAMN07573092	GCA_002300785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/785/GCA_002300785.1_ASM230078v1	-	B30
Vibrio parahaemolyticus	670	PRJNA345103	345103	Proteobacteria	Gammaproteobacteria	5.17628	45.1	-	MKRA01	30	5065	4820	3/6/17	3/9/17	Contig	Universidad Autonoma de Chile	SAMN05858277	GCA_002018725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/725/GCA_002018725.1_ASM201872v1	-	PMA14.14
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.17618	28.6	-	FAFT01	315	3827	3689	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664235	GCA_900013655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/655/GCA_900013655.1_Peptoclostridium_difficile	-	-
Vibrio cholerae O1	127906	PRJNA327651	327651	Proteobacteria	Gammaproteobacteria	4.02618	47.5	-	MBQS01	300	3900	3643	11/1/16	3/28/17	Scaffold	"Emerging Pathogens Institute, University of Florida,"	SAMN05426806	GCA_001860445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/445/GCA_001860445.1_ASM186044v1	-	CMR016
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08251	68.2	-	CFXB01	60	7313	6788	3/15/15	3/26/17	Scaffold	SC	SAMEA807032	GCA_001321325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/325/GCA_001321325.1_7907_5_18	-	C18
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.78581	50.7	-	CWXW01	413	5608	4605	7/16/15	2/24/17	Scaffold	SC	SAMEA2434378	GCA_001259215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/215/GCA_001259215.1_12850_1_51	-	20426786
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04729	41.2	-	FINS01	24	2062	1937	2/10/16	3/19/17	Contig	SC	SAMEA1566040	GCA_900061035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/035/GCA_900061035.1_8337_6_40	-	BM444a
Streptococcus agalactiae	1311	PRJNA374642	374642	Terrabacteria group	Firmicutes	2.13597	35.5	-	MVFL01	17	2195	2065	8/1/17	8/21/17	Contig	Genomic Research Laboratory (GRL)	SAMN06329893	GCA_002239305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/305/GCA_002239305.1_ASM223930v1	-	S226-M
Acinetobacter baumannii 25253_6	1310880	PRJNA194957	194957	Proteobacteria	Gammaproteobacteria	4.01244	39.2	-	JFVZ01	96	3974	3722	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570324	GCA_000589615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/615/GCA_000589615.1_ASM58961v1	-	25253_6
Pseudomonas aeruginosa	287	PRJEB6642	259916	Proteobacteria	Gammaproteobacteria	6.45723	66.5	-	CCPA01	60	6175	6006	9/5/14	3/16/17	Contig	UNIVERSITY OF LIVERPOOL	SAMEA2733097	GCA_000824685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/685/GCA_000824685.1_LES_CF_sputum_CF03_contigs_37_a1	-	Liverpool Epidemic Strain
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.21977	51.6	-	FESF01	93	2597	2186	2/9/16	3/21/17	Scaffold	SC	SAMEA2673775	GCA_900030955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/955/GCA_900030955.1_14355_5_3	-	2842STDY5881056
Helicobacter pylori	210	PRJNA265160	265160	Proteobacteria	delta/epsilon subdivisions	1.54445	39.2	-	JSXU01	47	1529	1376	12/16/14	3/25/17	Scaffold	"National Institute of Health, Portugal"	SAMN03145759	GCA_000802505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/505/GCA_000802505.1_ASM80250v1	25657274	207/99
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09368	39.6	-	CNYN02	247	2281	2078	3/23/15	3/11/17	Contig	SC	SAMEA1463200	GCA_001105665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/665/GCA_001105665.2_7553_4_40	-	NP7052
Escherichia coli KTE120	1169379	PRJNA157677	157677	Proteobacteria	Gammaproteobacteria	5.09923	50.6	-	ANXS01	189	5442	5048	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00847697	GCA_000326925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/925/GCA_000326925.1_Esch_coli_KTE120_V1	-	KTE120
Mycobacterium tuberculosis BTB09-377	1423506	PRJNA229287	229287	Terrabacteria group	Actinobacteria	4.3843	65.6	-	JKEP01	72	4316	4114	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414922	GCA_000658855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/855/GCA_000658855.1_Myco_tube_BTB09-377_V1	-	BTB09-377
Listeria monocytogenes	1639	PRJEB10764	310493	Terrabacteria group	Firmicutes	3.00139	37.8	-	CYWB01	39	3061	2965	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540866	GCA_001565135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/135/GCA_001565135.1_LM07422_assembly	-	LM07422
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.66954	30.2	-	MJYV01	81	1736	1597	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532395	GCA_001763495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/495/GCA_001763495.1_ASM176349v1	-	BCW_6888
Salmonella enterica subsp. enterica serovar Enteritidis str. 596866-70	910415	PRJNA59535	59535	Proteobacteria	Gammaproteobacteria	4.69254	52.1	-	ALEP01	41	4816	4560	7/18/12	5/19/17	Contig	FDA	SAMN01041106	GCA_000280215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/215/GCA_000280215.1_ASM28021v1	23045502	596866-70
Staphylococcus aureus M1346	1403842	PRJNA221388	221388	Terrabacteria group	Firmicutes	2.97292	32.9	-	JAWN01	14	3170	2982	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02363981	GCA_000533035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/035/GCA_000533035.1_Stap_aure_M1346_V1	-	M1346
Staphylococcus aureus M1475	1403860	PRJNA221406	221406	Terrabacteria group	Firmicutes	2.89057	32.9	-	JAWM01	24	3031	2875	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02363999	GCA_000533055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/055/GCA_000533055.1_Stap_aure_M1475_V1	-	M1475
Salmonella enterica subsp. enterica serovar Enteritidis str. 629164-26	910416	PRJNA59537	59537	Proteobacteria	Gammaproteobacteria	4.63307	52.1	-	ALEQ01	30	4724	4490	7/18/12	5/19/17	Contig	FDA	SAMN01041116	GCA_000280235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/235/GCA_000280235.1_ASM28023v1	23045502	629164-26
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.74662	30.2	-	MJYW01	83	1817	1683	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532397	GCA_001763515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/515/GCA_001763515.1_ASM176351v1	-	BCW_6891
Listeria monocytogenes	1639	PRJEB10765	310494	Terrabacteria group	Firmicutes	3.0218	37.8	-	CYVY01	52	3094	2989	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540867	GCA_001565155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/155/GCA_001565155.1_LM07423_assembly	-	LM07423
Mycobacterium tuberculosis BTB09-565	1423512	PRJNA229293	229293	Terrabacteria group	Actinobacteria	4.41132	65.5	-	JKEJ01	6	4292	4087	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414928	GCA_000658875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/875/GCA_000658875.1_Myco_tube_BTB09-565_V1	-	BTB09-565
Escherichia coli KTE122	1169380	PRJNA157679	157679	Proteobacteria	Gammaproteobacteria	5.15149	50.7	-	ANXT01	150	5408	5070	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00847698	GCA_000326945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/945/GCA_000326945.1_Esch_coli_KTE122_V1	-	KTE122
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.04618	39.7	-	CKQS01	53	2252	2033	3/21/15	3/11/17	Contig	SC	SAMEA1024953	GCA_001105705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/705/GCA_001105705.1_6680_7_1	-	SMRU961
Helicobacter pylori	210	PRJNA265824	265824	Proteobacteria	delta/epsilon subdivisions	1.66674	38.9	-	JTDG01	73	1672	1496	12/16/14	3/25/17	Scaffold	"National Institute of Health, Portugal"	SAMN03153403	GCA_000802525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/525/GCA_000802525.1_ASM80252v1	25657274	499/02
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16001	51.5	-	FESO01	82	2518	2149	2/9/16	3/21/17	Scaffold	SC	SAMEA2673830	GCA_900030965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/965/GCA_900030965.1_14355_5_20	-	2842STDY5881073
Pseudomonas aeruginosa	287	PRJEB7414	267100	Proteobacteria	Gammaproteobacteria	6.36642	66.3	-	CDFS01	370	5968	5832	11/24/14	3/16/17	Contig	ERA7	SAMEA2795755	GCA_000825745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/825/745/GCA_000825745.1_PAE221	25593247	Pae221_ST274
Acinetobacter baumannii 25253_7	1310881	PRJNA194958	194958	Proteobacteria	Gammaproteobacteria	4.03607	39.2	-	JFVY01	160	4012	3711	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570325	GCA_000589635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/635/GCA_000589635.1_ASM58963v1	-	25253_7
Streptococcus agalactiae	1311	PRJNA374643	374643	Terrabacteria group	Firmicutes	2.09342	35.4	-	MVFM01	32	2160	2022	8/1/17	8/21/17	Contig	Genomic Research Laboratory (GRL)	SAMN06329894	GCA_002239325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/325/GCA_002239325.1_ASM223932v1	-	S12-126
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.09357	41.2	-	FIOH01	20	2121	2004	2/10/16	3/19/17	Contig	SC	SAMEA1566116	GCA_900061045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/045/GCA_900061045.1_8337_6_51	-	EN020
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.77747	50.6	-	CWXB01	522	5570	4493	7/16/15	2/24/17	Scaffold	SC	SAMEA2434367	GCA_001259255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/255/GCA_001259255.1_12830_1_40	-	KY 3246
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.09955	68.2	-	CGIB01	69	7342	6781	3/15/15	3/27/17	Scaffold	SC	SAMEA807034	GCA_001321345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/345/GCA_001321345.1_7907_5_20	-	C20
Vibrio cholerae O1	127906	PRJNA327651	327651	Proteobacteria	Gammaproteobacteria	4.03414	47.5	-	MBQT01	149	3879	3665	11/1/16	3/28/17	Scaffold	"Emerging Pathogens Institute, University of Florida,"	SAMN05427118	GCA_001860465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/465/GCA_001860465.1_ASM186046v1	-	CMR017
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.2084	28.9	-	FAFU01	1213	3821	3622	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664236	GCA_900013665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/665/GCA_900013665.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.09281	45.3	-	MRVC01	56	4913	4684	3/28/17	3/30/17	Contig	FDA/CFSAN	SAMN06115936	GCA_002072835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/835/GCA_002072835.1_ASM207283v1	-	CFSAN026730
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.17859	37.4	-	FXFC01	161	3304	3087	4/26/17	5/6/17	Scaffold	SC	SAMEA3893502	GCA_900178735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/735/GCA_900178735.1_19789_6_101	-	VREN1901
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.21449	62.9	-	CGHP01	1431	4620	4584	3/15/15	6/14/15	Scaffold	SC	SAMEA751290	GCA_001332235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/235/GCA_001332235.1_5601_1_12	-	B060
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.76371	31.1	-	FBLK01	30	1824	1705	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683362	GCA_001497795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/795/GCA_001497795.1_H061980521a	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15824	64.1	-	CSWI01	22	5263	5081	3/24/15	3/18/17	Scaffold	SC	SAMEA1464833	GCA_001215325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/325/GCA_001215325.1_7396_7_32	-	PAP080
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16428	64.1	-	CSXG01	39	5284	5078	3/24/15	3/18/17	Scaffold	SC	SAMEA1464832	GCA_001215345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/345/GCA_001215345.1_7396_8_52	-	PAP100
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.8733	30.9	-	FBNF01	78	1966	1844	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683434	GCA_001497835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/835/GCA_001497835.1_H073700405	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.46199	67.1	-	CVJP01	1627	3589	3540	4/2/15	6/13/15	Scaffold	SC	SAMEA751323	GCA_001332355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/355/GCA_001332355.1_6062_2_2	-	B288
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.96448	37.7	-	FXFA01	148	3071	2871	4/26/17	5/6/17	Scaffold	SC	SAMEA3893870	GCA_900178745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/745/GCA_900178745.1_19789_5_34	-	VREN2771
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.13701	45.2	-	LHPE01	102	4949	4724	3/28/17	4/17/17	Contig	FDA/CFSAN	SAMN02741353	GCA_002072845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/845/GCA_002072845.1_W90A-a	28330888	CFSAN001616
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.21531	29	-	FAFW01	1497	3811	3574	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664237	GCA_900013675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/675/GCA_900013675.1_Peptoclostridium_difficile	-	-
Vibrio cholerae O1	127906	PRJNA327651	327651	Proteobacteria	Gammaproteobacteria	4.03639	47.5	-	MBQU01	583	3944	3566	11/1/16	3/28/17	Scaffold	"Emerging Pathogens Institute, University of Florida,"	SAMN05427311	GCA_001860485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/485/GCA_001860485.1_ASM186048v1	-	CMR018
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08807	68.2	-	CFZB01	74	7311	6779	3/15/15	3/27/17	Scaffold	SC	SAMEA807035	GCA_001321365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/365/GCA_001321365.1_7907_5_19	-	C19
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.88059	50.4	-	CWZR01	431	5457	4708	7/17/15	2/24/17	Scaffold	SC	SAMEA2445746	GCA_001259275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/275/GCA_001259275.1_12971_8_55	-	H140860382
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04811	41.2	-	FIOC01	22	2059	1952	2/10/16	3/19/17	Contig	SC	SAMEA1566069	GCA_900061055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/055/GCA_900061055.1_8337_6_52	-	EN023
Streptococcus agalactiae	1311	PRJNA374644	374644	Terrabacteria group	Firmicutes	2.14215	35.5	-	MVFN01	26	2217	2069	8/1/17	8/21/17	Contig	Genomic Research Laboratory (GRL)	SAMN06329895	GCA_002239345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/345/GCA_002239345.1_ASM223934v1	-	S15-164
Acinetobacter baumannii 45002_6	1310900	PRJNA194977	194977	Proteobacteria	Gammaproteobacteria	4.02298	39.1	-	JFUV01	113	4005	3735	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570434	GCA_000589655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/655/GCA_000589655.1_ASM58965v1	-	45002_6
Pseudomonas aeruginosa	287	PRJNA275365	275365	Proteobacteria	Gammaproteobacteria	6.68852	66.1	-	JYJZ01	31	6369	6150	3/11/15	3/17/17	Contig	"Institute of microbiology, Chinese Academy of Sciences"	SAMN03342417	GCA_000950725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/950/725/GCA_000950725.1_ASM95072v1	25908149	FRD1
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.19524	51.5	-	FESW01	100	2541	2186	2/9/16	3/21/17	Scaffold	SC	SAMEA2673895	GCA_900030975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/975/GCA_900030975.1_14355_5_40	-	2842STDY5881093
Helicobacter pylori	210	PRJNA265858	265858	Proteobacteria	delta/epsilon subdivisions	1.61967	38.9933	plasmid pHPY228:NZ_CM003127.1/CM003127.1	JSXY01	54	1616	1457	12/16/14	3/25/17	Scaffold	"National Institute of Health, Portugal"	SAMN03153534	GCA_000802545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/545/GCA_000802545.1_ASM80254v1	25657274	228/99
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.0855	39.4	-	CLJK01	74	2320	2085	3/21/15	3/11/17	Contig	SC	SAMEA1029082	GCA_001105725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/725/GCA_001105725.1_6925_8_17	-	SMRU2537
Escherichia coli KTE125	1169382	PRJNA157683	157683	Proteobacteria	Gammaproteobacteria	5.13175	50.5	-	ANXV01	115	5335	4972	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00847700	GCA_000326965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/965/GCA_000326965.1_Esch_coli_KTE125_V1	-	KTE125
Mycobacterium tuberculosis BTB10-253	1423519	PRJNA229300	229300	Terrabacteria group	Actinobacteria	4.39692	65.5	-	JKEC01	6	4273	4108	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414935	GCA_000658905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/905/GCA_000658905.1_Myco_tube_BTB10-253_V1	-	BTB10-253
Listeria monocytogenes	1639	PRJEB10766	310495	Terrabacteria group	Firmicutes	3.03537	37.8	-	CYVZ01	52	3116	3009	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540868	GCA_001565175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/175/GCA_001565175.1_LM07424_assembly	-	LM07424
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.77026	30.3	-	MJYX01	57	1844	1672	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532398	GCA_001763525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/525/GCA_001763525.1_ASM176352v1	-	BCW_6893
Salmonella enterica subsp. enterica serovar Enteritidis str. 629164-37	910417	PRJNA59539	59539	Proteobacteria	Gammaproteobacteria	4.69788	52.1	-	ALER01	50	4810	4559	7/18/12	5/19/17	Contig	FDA	SAMN01041117	GCA_000280255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/255/GCA_000280255.1_ASM28025v1	23045502	629164-37
Staphylococcus aureus M1479	1403864	PRJNA221410	221410	Terrabacteria group	Firmicutes	2.94612	33	-	JAWL01	13	3099	2933	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02364003	GCA_000533075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/075/GCA_000533075.1_Stap_aure_M1479_V1	-	M1479
Staphylococcus aureus M1480	1403865	PRJNA221411	221411	Terrabacteria group	Firmicutes	2.86778	32.9	-	JAWK01	19	3005	2843	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02364004	GCA_000533095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/095/GCA_000533095.1_Stap_aure_M1480_V1	-	M1480
Salmonella enterica subsp. enterica serovar Enteritidis str. 639672-46	910418	PRJNA59541	59541	Proteobacteria	Gammaproteobacteria	4.69023	52.1	-	ALES01	50	4802	4556	7/18/12	5/19/17	Contig	FDA	SAMN01041121	GCA_000280275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/275/GCA_000280275.1_ASM28027v1	23045502	639672-46
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.61555	30.5	-	MJYY01	120	1695	1573	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532399	GCA_001763535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/535/GCA_001763535.1_ASM176353v1	-	BCW_6896
Listeria monocytogenes	1639	PRJEB10767	310496	Terrabacteria group	Firmicutes	2.9686	37.8	-	CYWO01	46	3042	2938	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540870	GCA_001565195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/195/GCA_001565195.1_LM07425_assembly	-	LM07425
Mycobacterium tuberculosis BTB10-258	1423521	PRJNA229302	229302	Terrabacteria group	Actinobacteria	4.40461	65.5	-	JKEA01	6	4294	4103	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414937	GCA_000658925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/925/GCA_000658925.1_Myco_tube_BTB10-258_V1	-	BTB10-258
Escherichia coli LCT-EC52	1258567	PRJNA179341	179341	Proteobacteria	Gammaproteobacteria	5.20975	50.3	-	ANHT01	37	5322	4965	1/8/13	5/18/17	Scaffold	Beijing Genomics Institute	SAMN02469332	GCA_000331615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/331/615/GCA_000331615.1_genome_assembly_of_LCT-EC52_strain_of_E.coli	24604641	LCT-EC52
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07324	39.6	-	CNVQ02	141	2270	2070	3/23/15	3/11/17	Contig	SC	SAMEA1032532	GCA_001105785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/785/GCA_001105785.2_6999_7_6	-	354557
Helicobacter pylori	210	PRJNA265189	265189	Proteobacteria	delta/epsilon subdivisions	1.61567	39	-	JSXB01	45	1597	1434	12/16/14	3/25/17	Scaffold	"National Institute of Health, Portugal"	SAMN03151520	GCA_000802575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/575/GCA_000802575.1_ASM80257v1	25657274	655/99
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.114	51.8	-	FETJ01	60	2465	2115	2/9/16	3/21/17	Scaffold	SC	SAMEA2673971	GCA_900030985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/985/GCA_900030985.1_14355_5_62	-	2842STDY5881115
Pseudomonas aeruginosa	287	PRJNA277725	277725	Proteobacteria	Gammaproteobacteria	6.85283	66	-	JZUC01	266	6660	6373	4/3/15	3/17/17	Contig	Universidad de Santiago de Chile	SAMN03395017	GCA_000968815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/815/GCA_000968815.1_ASM96881v1	-	O400
Acinetobacter baumannii 45002_7	1310901	PRJNA194978	194978	Proteobacteria	Gammaproteobacteria	3.9883	39.1	-	JFUU01	82	3941	3702	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570435	GCA_000589675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/675/GCA_000589675.1_ASM58967v1	-	45002_7
Streptococcus agalactiae	1311	PRJNA374647	374647	Terrabacteria group	Firmicutes	2.07638	35.3	-	MVFQ01	25	2163	2020	8/1/17	8/21/17	Contig	Genomic Research Laboratory (GRL)	SAMN06329898	GCA_002239365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/365/GCA_002239365.1_ASM223936v1	-	S124-MA
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.06987	41.1	-	FIOF01	20	2083	1970	2/10/16	3/19/17	Contig	SC	SAMEA1566082	GCA_900061065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/065/GCA_900061065.1_8337_6_53	-	EN024
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.73494	50.6	-	CWWT01	453	5492	4473	7/16/15	2/24/17	Scaffold	SC	SAMEA2434361	GCA_001259295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/295/GCA_001259295.1_12830_1_34	-	KY 129
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08751	68.2	-	CFXU01	66	7312	6792	3/15/15	3/26/17	Scaffold	SC	SAMEA807038	GCA_001321385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/385/GCA_001321385.1_7909_4_16	-	C49
Vibrio cholerae	666	PRJNA351882	351882	Proteobacteria	Gammaproteobacteria	3.98539	47.4	-	MOLL01	416	3833	3587	1/17/17	3/28/17	Scaffold	University of Alberta	SAMN05957704	GCA_001953365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/365/GCA_001953365.1_ASM195336v1	-	DL4211
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.26447	29	-	FAFY01	1461	3853	3646	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664238	GCA_900013685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/685/GCA_900013685.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.0926	45.3	-	MRVB01	70	4924	4689	3/28/17	3/30/17	Contig	FDA/CFSAN	SAMN06115931	GCA_002072875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/875/GCA_002072875.1_ASM207287v1	-	CFSAN026729
Klebsiella pneumoniae	573	PRJNA408064	408064	Proteobacteria	Gammaproteobacteria	5.51551	57.1	-	NWVU01	135	5652	5084	9/27/17	9/27/17	Scaffold	Christian Medical College	SAMN07682590	GCA_002383765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/765/GCA_002383765.1_ASM238376v1	-	C3
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.98543	37.7	-	FXEU01	166	3095	2881	4/26/17	5/6/17	Scaffold	SC	SAMEA3893574	GCA_900178755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/755/GCA_900178755.1_19789_6_131	-	VREN2777
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.52773	67.2	-	CVJN01	1415	3609	3556	4/2/15	6/14/15	Scaffold	SC	SAMEA751327	GCA_001332395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/395/GCA_001332395.1_6062_2_4	-	B307
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66142	31.4	-	FBJC01	28	1718	1630	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683302	GCA_001497875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/875/GCA_001497875.1_EC3356	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.39327	64	-	CSWL01	40	5480	5267	3/24/15	3/18/17	Scaffold	SC	SAMEA1464876	GCA_001215385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/385/GCA_001215385.1_7396_7_34	-	PAP082
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15883	64.2	-	CSWC01	29	5163	5019	3/24/15	3/18/17	Scaffold	SC	SAMEA1464890	GCA_001215445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/445/GCA_001215445.1_7396_7_27	-	PAP075
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.62582	31.6	-	FBAL01	46	1626	1551	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683064	GCA_001497895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/895/GCA_001497895.1_H073580401	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.61433	67.4	-	CVJL01	1262	3610	3559	4/2/15	6/13/15	Scaffold	SC	SAMEA751329	GCA_001332415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/415/GCA_001332415.1_6062_2_3	-	B306
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.96601	37.7	-	FXEK01	154	3056	2868	4/26/17	5/6/17	Scaffold	SC	SAMEA3893863	GCA_900178765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/765/GCA_900178765.1_19789_5_12	-	VREN3243
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.09317	45.3	-	LHPD01	44	4900	4701	3/28/17	4/17/17	Contig	FDA/CFSAN	SAMN02741352	GCA_002072885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/885/GCA_002072885.1_JJ21-1Ca	28330888	CFSAN001615
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.29514	28.9	-	FAGB01	906	3928	3774	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664242	GCA_900013695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/695/GCA_900013695.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA351882	351882	Proteobacteria	Gammaproteobacteria	3.98121	47.5	-	MOLM01	78	3754	3567	1/17/17	3/28/17	Scaffold	University of Alberta	SAMN05957705	GCA_001953375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/375/GCA_001953375.1_ASM195337v1	-	DL4215
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.0869	68.2	-	CGFL01	70	7313	6788	3/15/15	3/26/17	Scaffold	SC	SAMEA807039	GCA_001321405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/405/GCA_001321405.1_7909_4_24	-	C57
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.5014	50.8	-	CXAY01	364	4812	4318	7/16/15	2/24/17	Scaffold	SC	SAMEA954637	GCA_001259335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/335/GCA_001259335.1_5008_8_10	-	ShIB690_401086
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04123	41.2	-	FISA01	23	2048	1939	2/10/16	3/19/17	Contig	SC	SAMEA1566140	GCA_900061075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/075/GCA_900061075.1_8525_5_90	-	VS3888
Streptococcus agalactiae	1311	PRJNA374648	374648	Terrabacteria group	Firmicutes	2.14303	35.5	-	MVFR01	57	2247	2059	8/1/17	8/21/17	Contig	Genomic Research Laboratory (GRL)	SAMN06329899	GCA_002239385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/385/GCA_002239385.1_ASM223938v1	-	S89-MA
Acinetobacter baumannii 45002_8	1310902	PRJNA194979	194979	Proteobacteria	Gammaproteobacteria	4.38157	38.9	-	JFUT01	582	4518	4035	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570436	GCA_000589695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/695/GCA_000589695.1_ASM58969v1	-	45002_8
Pseudomonas aeruginosa	287	PRJDB3351	277937	Proteobacteria	Gammaproteobacteria	7.16754	65.8	-	BBQK01	91	6926	6690	3/10/15	3/17/17	Contig	National Institute of Advanced Industrial Science and Technology (AIST)	SAMD00023456	GCA_000974565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/565/GCA_000974565.1_ASM97456v1	25999557	KF702
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.14724	51.6	-	FETK01	87	2494	2142	2/9/16	3/21/17	Scaffold	SC	SAMEA2673988	GCA_900030995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/995/GCA_900030995.1_14355_5_67	-	2842STDY5881120
Helicobacter pylori	210	PRJNA265862	265862	Proteobacteria	delta/epsilon subdivisions	1.61997	38.9729	plasmid pHPY1786:NZ_CM003130.1/CM003130.1	JSXW01	41	1586	1440	12/16/14	3/25/17	Scaffold	"National Institute of Health, Portugal"	SAMN03153600	GCA_000802605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/605/GCA_000802605.1_ASM80260v1	25657274	1786/05
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08607	39.5	-	CKWZ01	68	2278	2057	3/21/15	3/11/17	Contig	SC	SAMEA1025782	GCA_001105865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/865/GCA_001105865.1_6823_6_14	-	SMRU1982
Escherichia coli 09BKT078844	1081887	PRJNA72903	72903	Proteobacteria	Gammaproteobacteria	5.32634	50.3	-	AODX01	616	5716	5288	1/31/13	2/24/17	Scaffold	Institute for Genome Sciences	SAMN01112698	GCA_000340455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/455/GCA_000340455.2_ASM34045v2	-	09BKT078844
Mycobacterium tuberculosis BTB10-308	1423525	PRJNA229306	229306	Terrabacteria group	Actinobacteria	4.41819	65.5	-	JKDW01	7	4275	4106	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414941	GCA_000658945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/945/GCA_000658945.1_Myco_tube_BTB_10-308_V1	-	BTB10-308
Listeria monocytogenes	1639	PRJEB10768	310497	Terrabacteria group	Firmicutes	2.98226	37.8	-	CYWE01	35	3051	2947	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540871	GCA_001565215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/215/GCA_001565215.1_LM07456_assembly	-	LM07456
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.71324	30.6	-	MJYZ01	27	1780	1620	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532400	GCA_001763575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/575/GCA_001763575.1_ASM176357v1	-	BCW_6897
Salmonella enterica subsp. enterica serovar Enteritidis str. 639672-50	910419	PRJNA59543	59543	Proteobacteria	Gammaproteobacteria	4.69812	52.1	-	ALET01	42	4807	4548	7/18/12	5/19/17	Contig	FDA	SAMN01041122	GCA_000280295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/295/GCA_000280295.1_ASM28029v1	23045502	639672-50
Staphylococcus aureus M1485	1403869	PRJNA221415	221415	Terrabacteria group	Firmicutes	2.88702	32.9	-	JAWJ01	21	3043	2878	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02364008	GCA_000533115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/115/GCA_000533115.1_Stap_aure_M1485_V1	-	M1485
Staphylococcus aureus M1486	1403870	PRJNA221416	221416	Terrabacteria group	Firmicutes	2.87087	33	-	JAWI01	9	2994	2845	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02364009	GCA_000533135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/135/GCA_000533135.1_Stap_aure_M1486_V1	-	M1486
Salmonella enterica subsp. enterica serovar Enteritidis str. 77-2659	926035	PRJNA60071	60071	Proteobacteria	Gammaproteobacteria	4.69601	52.1	-	ALEV01	43	4808	4558	7/18/12	5/19/17	Contig	FDA	SAMN01041144	GCA_000280335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/335/GCA_000280335.1_ASM28033v1	23045502	77-2659
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.66881	30.6	-	MJZA01	36	1703	1588	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532401	GCA_001763595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/595/GCA_001763595.1_ASM176359v1	-	BCW_6898
Listeria monocytogenes	1639	PRJEB10769	310498	Terrabacteria group	Firmicutes	2.86162	37.9	-	CYWD01	30	2878	2810	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540872	GCA_001565235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/235/GCA_001565235.1_LM08-00154_assembly	-	LM08-00154
Mycobacterium tuberculosis BTB10-092	1423515	PRJNA229296	229296	Terrabacteria group	Actinobacteria	4.43288	65.5	-	JKEG01	7	4292	4093	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414931	GCA_000659005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/005/GCA_000659005.1_Myco_tube_BTB10-092_V1	-	BTB10-092
Escherichia coli KTE2	1169324	PRJNA157567	157567	Proteobacteria	Gammaproteobacteria	5.39764	50.7	-	ANSN01	14	5507	5180	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00847642	GCA_000350625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/625/GCA_000350625.1_Esch_coli_KTE2_V1	-	KTE2
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00787	39.7	-	CNVD02	108	2181	1984	3/22/15	3/5/17	Contig	SC	SAMEA1032593	GCA_001105905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/905/GCA_001105905.2_6999_7_2	-	335574
Helicobacter pylori	210	PRJNA265112	265112	Proteobacteria	delta/epsilon subdivisions	1.5733	39.0923	plasmid pHPY173:NZ_CM003128.1/CM003128.1	JSXX01	79	1583	1417	12/16/14	3/25/17	Scaffold	"National Institute of Health, Portugal"	SAMN03145647	GCA_000802625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/625/GCA_000802625.1_ASM80262v1	25657274	173/00
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16405	51.5	-	FETL01	81	2519	2155	2/9/16	3/21/17	Scaffold	SC	SAMEA2674007	GCA_900031005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/005/GCA_900031005.1_14355_5_73	-	2842STDY5881126
Pseudomonas aeruginosa MRSN 317	1410037	PRJNA223629	223629	Proteobacteria	Gammaproteobacteria	6.34841	66.5	-	LBIH01	37	6082	5909	4/29/15	3/17/17	Contig	J. Craig Venter Institute	SAMN03486516	GCA_000982125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/125/GCA_000982125.1_ASM98212v1	-	MRSN 317
Acinetobacter baumannii 44895_5	1310889	PRJNA194966	194966	Proteobacteria	Gammaproteobacteria	4.06306	39.2	-	JFVD01	154	4078	3752	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570426	GCA_000589715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/715/GCA_000589715.1_ASM58971v1	-	44895_5
Streptococcus agalactiae	1311	PRJNA323756	323756	Terrabacteria group	Firmicutes	2.02153	35.5	-	LYXD01	5	2046	1940	8/11/17	8/15/17	Contig	Chinese Academy of Fishery Sciences	SAMN05188706	GCA_002246945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/945/GCA_002246945.1_ASM224694v1	-	Hn1404
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.15152	41.1	-	FILK01	51	2202	2062	2/10/16	3/19/17	Contig	SC	SAMEA1316665	GCA_900061345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/345/GCA_900061345.1_7054_7_9	-	SS974
Shigella sonnei	624	PRJEB2460	204320	Proteobacteria	Gammaproteobacteria	4.77589	50.6	-	CXFI01	398	5262	4633	7/16/15	2/24/17	Scaffold	SC	SAMEA1027717	GCA_001259355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/355/GCA_001259355.1_6350_1_12	-	sh07-2004
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.09012	68.2	-	CFZV01	70	7315	6786	3/15/15	3/26/17	Scaffold	SC	SAMEA807041	GCA_001321425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/425/GCA_001321425.1_7909_4_26	-	C59
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.02521	47.5	-	MSGE01	104	3816	3678	3/31/17	4/6/17	Scaffold	Univ. of Maryland	SAMN06144957	GCA_002076175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/175/GCA_002076175.1_ASM207617v1	28219321	O6MU
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.18783	28.7	-	FAGK01	953	3817	3639	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664250	GCA_900013735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/735/GCA_900013735.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus O4:K55 str. NY3547	1173955	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.15785	45.2	-	LHQW01	71	4947	4759	3/28/17	4/17/17	Contig	FDA/CFSAN	SAMN01816334	GCA_002072925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/925/GCA_002072925.1_NY3547	28330888	NY3547
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.03439	37.7	-	FXEX01	146	3144	2908	4/26/17	5/6/17	Scaffold	SC	SAMEA3893519	GCA_900178775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/775/GCA_900178775.1_19789_6_109	-	VREN2167
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.60566	67.3	-	CFYX01	1308	3623	3570	3/15/15	6/14/15	Scaffold	SC	SAMEA751380	GCA_001332635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/635/GCA_001332635.1_6062_2_11	-	B252
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.70023	31.3	-	FBHR01	32	1763	1648	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683265	GCA_001497915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/915/GCA_001497915.1_BRISPIG3	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.84923	64.1	-	CSYJ01	15	4814	4668	3/24/15	3/18/17	Scaffold	SC	SAMEA1464966	GCA_001215465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/465/GCA_001215465.1_7396_8_83	-	PAP131
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.14893	64.1	-	CSXC01	32	5252	5060	3/24/15	3/18/17	Scaffold	SC	SAMEA1464935	GCA_001215485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/485/GCA_001215485.1_7396_7_9	-	PAP057
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.57343	31.8	-	FBQO01	25	1585	1512	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683496	GCA_001497935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/935/GCA_001497935.1_H072760517	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.49413	67.1	-	CVJO01	1492	3585	3537	4/2/15	6/14/15	Scaffold	SC	SAMEA751424	GCA_001332775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/775/GCA_001332775.1_6062_1_2	-	B294
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.96671	37.7	-	FXEZ01	146	3061	2869	4/26/17	5/6/17	Scaffold	SC	SAMEA3893557	GCA_900178785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/785/GCA_900178785.1_19789_6_124	-	VREN2656
Vibrio parahaemolyticus	670	PRJNA280664	280664	Proteobacteria	Gammaproteobacteria	5.15367	45.1997	plasmid pVN0028:NZ_CM007808.1/CM007808.1	MVKK01	81	4973	4770	3/28/17	4/1/17	Contig	"Technische Universitaet Dresden, Medical Faculty 'Carl Gustav Carus'"	SAMN03465090	GCA_002072975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/975/GCA_002072975.1_ASM207297v1	-	VN-0028
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.29069	29	-	FAGL01	1798	3860	3647	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664253	GCA_900013745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/745/GCA_900013745.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.02593	47.5	-	MSGG01	99	3813	3678	3/31/17	4/6/17	Scaffold	Univ. of Maryland	SAMN06144955	GCA_002076185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/185/GCA_002076185.1_ASM207618v1	28219321	11S
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.0853	68.2	-	CIBL01	63	7301	6786	4/21/15	3/26/17	Scaffold	SC	SAMEA807042	GCA_001321445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/445/GCA_001321445.1_7909_4_27	-	C60
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.86104	50.4	-	CXLM01	431	5535	4686	7/16/15	2/24/17	Scaffold	SC	SAMEA2004001	GCA_001259395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/395/GCA_001259395.1_8290_5_10	-	36860548
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.03085	41.2	-	FILM01	25	2019	1926	2/10/16	3/19/17	Contig	SC	SAMEA1316656	GCA_900061365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/365/GCA_900061365.1_7054_7_10	-	SS976
Streptococcus agalactiae	1311	PRJNA384845	384845	Terrabacteria group	Firmicutes	1.79058	35.2	-	NHZY01	22	1841	1641	8/18/17	8/18/17	Contig	Sichuan Agricultural University	SAMN06849088	GCA_002259785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/785/GCA_002259785.1_ASM225978v1	-	LYJ2015101
Acinetobacter baumannii 44895_6	1310890	PRJNA194967	194967	Proteobacteria	Gammaproteobacteria	4.06149	39.2	-	JFVC01	125	4049	3765	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570427	GCA_000589735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/735/GCA_000589735.1_ASM58973v1	-	44895_6
Pseudomonas aeruginosa MRSN 321	1410038	PRJNA223630	223630	Proteobacteria	Gammaproteobacteria	6.26688	66.5	-	LBIG01	24	5946	5790	4/29/15	3/17/17	Contig	J. Craig Venter Institute	SAMN03486517	GCA_000982155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/155/GCA_000982155.1_ASM98215v1	-	MRSN 321
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.19482	51.4	-	FETN01	105	2554	2179	2/9/16	3/21/17	Scaffold	SC	SAMEA2674019	GCA_900031015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/015/GCA_900031015.1_14355_5_78	-	2842STDY5881131
Helicobacter pylori	210	PRJNA265846	265846	Proteobacteria	delta/epsilon subdivisions	1.64208	38.9967	plasmid pHPY1846:NZ_CM003129.1/CM003129.1	JSXV01	58	1618	1455	12/16/14	3/25/17	Scaffold	"National Institute of Health, Portugal"	SAMN03153510	GCA_000802645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/645/GCA_000802645.1_ASM80264v1	25657274	1846/05
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11143	39.6	-	CLHU01	59	2334	2105	3/21/15	3/11/17	Contig	SC	SAMEA1026111	GCA_001106005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/005/GCA_001106005.1_6925_6_1	-	SMRU2185
Escherichia coli KTE4	1169325	PRJNA157569	157569	Proteobacteria	Gammaproteobacteria	5.18849	50.6	-	ANSO01	10	5377	5013	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00847643	GCA_000350645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/645/GCA_000350645.1_Esch_coli_KTE4_V1	-	KTE4
Mycobacterium tuberculosis TKK-01-0008	1267355	PRJNA183514	183514	Terrabacteria group	Actinobacteria	4.41959	65.5	-	JLZN01	7	4316	4099	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01828242	GCA_000659025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/025/GCA_000659025.1_Myco_tube_TKK-01-0008_V3	-	TKK-01-0008
Listeria monocytogenes	1639	PRJEB10771	310499	Terrabacteria group	Firmicutes	2.96677	37.8	-	CYWF01	20	3017	2955	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540873	GCA_001565255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/255/GCA_001565255.1_LM08-00235_assembly	-	LM08-00235
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.67468	30.7	-	MJZB01	35	1707	1587	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532402	GCA_001763615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/615/GCA_001763615.1_ASM176361v1	-	BCW_6899
Salmonella enterica subsp. enterica serovar Enteritidis str. 78-1757	926036	PRJNA60073	60073	Proteobacteria	Gammaproteobacteria	4.69588	52.1	-	ALEW01	40	4809	4569	7/18/12	5/19/17	Contig	FDA	SAMN01041145	GCA_000280355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/355/GCA_000280355.1_ASM28035v1	23045502	78-1757
Staphylococcus aureus M1492	1403876	PRJNA221422	221422	Terrabacteria group	Firmicutes	2.84893	32.9	-	JAWH01	11	2983	2824	1/31/14	3/3/17	Scaffold	Broad Institute	SAMN02364015	GCA_000533155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/155/GCA_000533155.1_Stap_aure_M1492_V1	-	M1492
Staphylococcus aureus M1499	1403882	PRJNA221428	221428	Terrabacteria group	Firmicutes	2.85418	32.9	-	JAWG01	8	3001	2845	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02364021	GCA_000533175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/175/GCA_000533175.1_Stap_aure_M1499_V1	-	M1499
Salmonella enterica subsp. enterica serovar Enteritidis str. 22510-1	926037	PRJNA60075	60075	Proteobacteria	Gammaproteobacteria	4.6926	52.1	-	ALEX01	39	4796	4556	7/18/12	5/19/17	Contig	FDA	SAMN01041087	GCA_000280375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/375/GCA_000280375.1_ASM28037v1	23045502	22510-1
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.83362	30.3	-	MJZC01	60	1881	1729	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532403	GCA_001763625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/625/GCA_001763625.1_ASM176362v1	-	BCW_6900
Listeria monocytogenes	1639	PRJEB10773	310500	Terrabacteria group	Firmicutes	2.99682	37.7	-	CYWG01	34	3029	2970	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540874	GCA_001565275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/275/GCA_001565275.1_LM08-00396_assembly	-	LM08-00396
Mycobacterium tuberculosis TKK-01-0017	1267356	PRJNA183515	183515	Terrabacteria group	Actinobacteria	4.39776	65.6	-	JLZE01	1	4278	4105	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01828243	GCA_000659045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/045/GCA_000659045.1_Myco_tube_TKK-01-0017_V3	-	TKK-01-0017
Escherichia coli KTE5	1169326	PRJNA157571	157571	Proteobacteria	Gammaproteobacteria	5.29697	50.6	-	ANSP01	10	5530	5177	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00847644	GCA_000350665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/665/GCA_000350665.1_Esch_coli_KTE5_V1	-	KTE5
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.29844	39.7	-	CLWR01	67	2527	2297	3/21/15	3/11/17	Contig	SC	SAMEA1028856	GCA_001106105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/105/GCA_001106105.1_6983_5_11	-	SMRU2315
Helicobacter pylori	210	PRJNA276970	276970	Proteobacteria	delta/epsilon subdivisions	1.72558	38.8	-	LAQK01	27	1679	1509	3/31/15	3/26/17	Scaffold	Xcelris labs Ltd	SAMN03450439	GCA_000966875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/875/GCA_000966875.1_ASM96687v1	26067974	7.13
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12759	51.7	-	FETW01	84	2499	2173	2/9/16	3/19/17	Scaffold	SC	SAMEA2673781	GCA_900031025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/025/GCA_900031025.1_14355_6_5	-	2842STDY5881154
Pseudomonas aeruginosa	287	PRJNA283248	283248	Proteobacteria	Gammaproteobacteria	6.26737	66.6	-	LCWH01	77	5957	5805	5/26/15	3/17/17	Contig	University of Malaya	SAMN03610562	GCA_001013395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/013/395/GCA_001013395.1_ASM101339v1	-	UM-01
Acinetobacter baumannii 45002_5	1310899	PRJNA194976	194976	Proteobacteria	Gammaproteobacteria	3.98552	39.1	-	JFUW01	77	3943	3703	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570433	GCA_000589755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/755/GCA_000589755.1_ASM58975v1	-	45002_5
Streptococcus agalactiae	1311	PRJNA392218	392218	Terrabacteria group	Firmicutes	1.80375	35.3	-	NKQB01	30	1877	1647	8/23/17	8/23/17	Contig	Moredun Research Institute	SAMN07285932	GCA_002266865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/865/GCA_002266865.1_ASM226686v1	-	14-110
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.12831	40.7	-	FILT01	26	2112	2011	2/10/16	3/19/17	Contig	SC	SAMEA1316706	GCA_900061385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/385/GCA_900061385.1_7054_7_71	-	SS991
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.66696	50.8	-	CXBA01	355	5032	4533	7/16/15	2/24/17	Scaffold	SC	SAMEA954834	GCA_001259435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/435/GCA_001259435.1_5008_8_3	-	ShIB3_401079
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08943	68.2	-	CFWT01	60	7309	6784	3/15/15	4/10/17	Scaffold	SC	SAMEA807045	GCA_001321465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/465/GCA_001321465.1_7909_4_8	-	C41
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.04459	47.5	-	MSGJ01	93	3845	3697	3/31/17	4/6/17	Scaffold	Univ. of Maryland	SAMN06144962	GCA_002076265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/265/GCA_002076265.1_ASM207626v1	28219321	TEM/10/01-002
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.25675	28.9	-	FAGI01	485	3959	3801	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664251	GCA_900013755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/755/GCA_900013755.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA280792	280792	Proteobacteria	Gammaproteobacteria	5.19601	45.1	-	MVKL01	56	4939	4740	3/28/17	3/30/17	Contig	"Technische Universitaet Dresden, Medical Faculty 'Carl Gustav Carus'"	SAMN03470168	GCA_002072985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/985/GCA_002072985.1_ASM207298v1	-	VN-0029
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.03431	37.7	-	FXFJ01	143	3129	2901	4/26/17	5/6/17	Scaffold	SC	SAMEA3893538	GCA_900178795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/795/GCA_900178795.1_19789_6_116	-	VREN2304
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.28628	59	-	CGAH01	1182	4652	4624	3/15/15	6/13/15	Scaffold	SC	SAMEA751428	GCA_001332815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/815/GCA_001332815.1_6062_3_6	-	B067
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65993	31.4	-	FBAX01	19	1719	1622	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683084	GCA_001497955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/955/GCA_001497955.1_EC4951	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.39616	64.2	-	CSXL01	45	5486	5319	3/24/15	3/18/17	Scaffold	SC	SAMEA1464952	GCA_001215565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/565/GCA_001215565.1_7396_8_58	-	PAP106
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.1578	64.1	-	CSYZ01	22	5268	4927	3/24/15	3/18/17	Scaffold	SC	SAMEA1317715	GCA_001215605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/605/GCA_001215605.1_7520_7_26	-	PAP146
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.72684	31.3	-	FBME01	39	1806	1701	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683383	GCA_001497975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/975/GCA_001497975.1_UNOR5482c	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.6286	67.5	-	CVJK01	1276	3619	3569	4/2/15	6/14/15	Scaffold	SC	SAMEA751431	GCA_001332855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/855/GCA_001332855.1_6062_3_11	-	B291
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.97477	37.7	-	FXEI01	148	3120	2874	4/26/17	5/6/17	Scaffold	SC	SAMEA3893584	GCA_900178805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/805/GCA_900178805.1_19789_6_136	-	VREN2832
Vibrio parahaemolyticus	670	PRJNA280796	280796	Proteobacteria	Gammaproteobacteria	5.22531	45.1	-	MVKN01	88	5053	4858	3/28/17	3/30/17	Contig	"Technische Universitaet Dresden, Medical Faculty 'Carl Gustav Carus'"	SAMN03470181	GCA_002073005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/005/GCA_002073005.1_ASM207300v1	-	VN-0293
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.2673	28.9	-	FAGS01	1463	3889	3600	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664259	GCA_900013795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/795/GCA_900013795.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.02439	47.5	-	MSGK01	90	3822	3678	3/31/17	4/6/17	Scaffold	Univ. of Maryland	SAMN06144963	GCA_002076315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/315/GCA_002076315.1_ASM207631v1	28219321	48055
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08851	68.2	-	CIBF01	60	7306	6799	4/21/15	3/27/17	Scaffold	SC	SAMEA807046	GCA_001321485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/485/GCA_001321485.1_7909_4_23	-	C56
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.69223	50.7	-	CXAL01	381	5258	4513	7/16/15	2/24/17	Scaffold	SC	SAMEA2445684	GCA_001259455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/455/GCA_001259455.1_12971_8_8	-	H082060203
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.03757	41.2	-	FIOK01	19	2044	1933	2/10/16	3/19/17	Contig	SC	SAMEA1566049	GCA_900061395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/395/GCA_900061395.1_8337_6_59	-	EN124
Streptococcus agalactiae	1311	PRJNA392218	392218	Terrabacteria group	Firmicutes	1.81547	35.3	-	NKQC01	51	1892	1703	8/23/17	8/23/17	Contig	Moredun Research Institute	SAMN07285931	GCA_002266905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/905/GCA_002266905.1_ASM226690v1	-	14-104
Acinetobacter baumannii 45002_10	1310904	PRJNA194981	194981	Proteobacteria	Gammaproteobacteria	4.06706	39.1	-	JFUZ01	156	4065	3749	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570430	GCA_000589775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/775/GCA_000589775.1_ASM58977v1	-	45002_10
Pseudomonas aeruginosa	287	PRJEB8355	283369	Proteobacteria	Gammaproteobacteria	7.04009	66	-	CGFY01	83	6911	6589	5/9/15	3/17/17	Contig	CEBITEC	SAMEA3302518	GCA_001028745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/745/GCA_001028745.1_RN21	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.13019	51.7	-	FEUJ01	78	2490	2158	2/9/16	3/19/17	Scaffold	SC	SAMEA2673875	GCA_900031035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/035/GCA_900031035.1_14355_6_41	-	2842STDY5881190
Helicobacter pylori	210	PRJNA295350	295350	Proteobacteria	delta/epsilon subdivisions	1.54248	38.9	-	LJNZ02	24	1542	1400	10/29/15	3/28/17	Scaffold	University of Malaya - University of Western Australia	SAMN04046444	GCA_001420425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/425/GCA_001420425.2_ASM142042v2	-	UM229S
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00364	39.7	-	CNWQ02	125	2169	1961	3/22/15	3/11/17	Contig	SC	SAMEA1032575	GCA_001106165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/165/GCA_001106165.2_7001_2_16	-	R34-3121
Escherichia coli KTE10	1169330	PRJNA157579	157579	Proteobacteria	Gammaproteobacteria	5.13763	50.7	-	ANSQ01	9	5269	4898	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00847648	GCA_000350685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/685/GCA_000350685.1_Esch_coli_KTE10_V1	-	KTE10
Mycobacterium tuberculosis TKK-01-0021	1267358	PRJNA183517	183517	Terrabacteria group	Actinobacteria	4.41317	65.5	-	JLZA01	11	4308	4107	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01828245	GCA_000659065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/065/GCA_000659065.1_Myco_tube_TKK-01-0021_V3	-	TKK-01-0021
Listeria monocytogenes	1639	PRJEB10774	310501	Terrabacteria group	Firmicutes	3.04991	37.8	-	CYWH01	53	3113	3033	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540875	GCA_001565295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/295/GCA_001565295.1_LM08-01050_assembly	-	LM08-01050
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.67163	30.3	-	MJZD01	172	1748	1583	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532404	GCA_001763645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/645/GCA_001763645.1_ASM176364v1	-	BCW_6901
Salmonella enterica subsp. enterica serovar Enteritidis str. 8b-1	930769	PRJNA60511	60511	Proteobacteria	Gammaproteobacteria	4.77762	52.1	-	ALEY01	42	4906	4647	7/18/12	5/19/17	Contig	FDA	SAMN01041148	GCA_000280395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/395/GCA_000280395.1_ASM28039v1	23045502	8b-1
Staphylococcus aureus M1502	1403885	PRJNA221431	221431	Terrabacteria group	Firmicutes	2.89903	32.9	-	JAWF01	28	3046	2896	1/31/14	3/2/17	Scaffold	Broad Institute	SAMN02364024	GCA_000533195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/195/GCA_000533195.1_Stap_aure_M1502_V1	-	M1502
Staphylococcus aureus SJOS6050	1409360	PRJNA223680	223680	Terrabacteria group	Firmicutes	2.91991	32.8	-	JBOJ01	36	3108	2935	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381421	GCA_000537915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/915/GCA_000537915.1_Stap_aure_SJOS6050_V1	-	SJOS6050
Salmonella enterica subsp. enterica serovar Enteritidis str. 648905 5-18	984228	PRJNA62825	62825	Proteobacteria	Gammaproteobacteria	4.69274	52.1	-	ALEZ01	53	4813	4546	7/18/12	5/19/17	Contig	FDA	SAMN01041137	GCA_000280415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/415/GCA_000280415.1_ASM28041v1	23045502	648905 5-18
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.71231	30.4	-	MJZE01	71	1795	1637	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532406	GCA_001763675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/675/GCA_001763675.1_ASM176367v1	-	BCW_6904
Listeria monocytogenes	1639	PRJEB10775	310502	Terrabacteria group	Firmicutes	2.8678	37.9	-	CYWI01	34	2873	2808	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540876	GCA_001565315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/315/GCA_001565315.1_LM08-01408_assembly	-	LM08-01408
Mycobacterium tuberculosis TKK-01-0023	1267359	PRJNA183518	183518	Terrabacteria group	Actinobacteria	4.41168	65.4	-	JLYY01	6	4290	4089	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01828246	GCA_000659085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/085/GCA_000659085.1_Myco_tube_TKK-01-0023_V3	-	TKK-01-0023
Escherichia coli KTE12	1169332	PRJNA157583	157583	Proteobacteria	Gammaproteobacteria	5.022	50.8	-	ANSS01	17	5179	4820	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00847650	GCA_000350725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/725/GCA_000350725.1_Esch_coli_KTE12_V1	-	KTE12
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1131	39.7	-	CKVJ01	57	2260	1979	3/21/15	3/11/17	Contig	SC	SAMEA1025886	GCA_001106225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/225/GCA_001106225.1_6823_4_10	-	SMRU1930
Helicobacter pylori	210	PRJNA295613	295613	Proteobacteria	delta/epsilon subdivisions	1.62567	38.6	-	LJXI02	27	1617	1440	11/19/15	3/28/17	Scaffold	University of Malaya-University of Western Australia	SAMN04076425	GCA_001446295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/295/GCA_001446295.2_ASM144629v2	-	UM276S
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11669	51.8	-	FEUM01	72	2446	2112	2/9/16	3/21/17	Scaffold	SC	SAMEA2673899	GCA_900031045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/045/GCA_900031045.1_14355_6_50	-	2842STDY5881199
Pseudomonas aeruginosa	287	PRJNA274345	274345	Proteobacteria	Gammaproteobacteria	6.29104	66.6	-	JYLC01	30	5970	5836	6/30/15	6/26/17	Contig	"Zentralinstitut fuer Ernaehrungs- und Lebensmittelforschung (ZIEL), WZW, TUM"	SAMN03328803	GCA_001042925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/925/GCA_001042925.1_G1273	26675012	DSM 50071
Acinetobacter baumannii 45002_3	1310897	PRJNA194974	194974	Proteobacteria	Gammaproteobacteria	4.00036	39	-	JFUY01	87	3955	3699	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570431	GCA_000589795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/795/GCA_000589795.1_ASM58979v1	-	45002_3
Streptococcus agalactiae	1311	PRJNA392216	392216	Terrabacteria group	Firmicutes	2.00252	35.4	-	NKPY01	51	2033	1933	8/23/17	8/25/17	Contig	Moredun Research Institute	SAMN07285929	GCA_002266915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/915/GCA_002266915.1_ASM226691v1	-	14-119
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.06876	41.1	-	FIRZ01	23	2067	1966	2/10/16	3/19/17	Contig	SC	SAMEA1566071	GCA_900061405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/405/GCA_900061405.1_8525_5_94	-	01ZN-ST222
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.61975	51	-	CXEH01	347	5060	4472	7/17/15	2/24/17	Scaffold	SC	SAMEA954579	GCA_001259515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/515/GCA_001259515.1_5417_2_6	-	20040489_1361397
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.09177	68.2	-	CFYP01	69	7321	6787	3/15/15	3/26/17	Scaffold	SC	SAMEA807047	GCA_001321505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/505/GCA_001321505.1_7909_4_6	-	C39
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.02277	47.5	-	MSEO01	108	3815	3669	3/31/17	4/6/17	Scaffold	Univ. of Maryland	SAMN06144940	GCA_002076415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/415/GCA_002076415.1_ASM207641v1	28219321	7714
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.1807	28.7	-	FAGX01	813	3777	3649	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664264	GCA_900013805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/805/GCA_900013805.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA280794	280794	Proteobacteria	Gammaproteobacteria	4.98311	45.4	-	MVKM01	55	4758	4569	3/28/17	3/30/17	Contig	"Technische Universitaet Dresden, Medical Faculty 'Carl Gustav Carus'"	SAMN03470171	GCA_002073025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/025/GCA_002073025.1_ASM207302v1	-	VN-5003
Klebsiella pneumoniae	573	PRJNA408064	408064	Proteobacteria	Gammaproteobacteria	5.62136	57	-	NXFJ01	202	5792	5200	10/1/17	10/1/17	Scaffold	Christian Medical College	SAMN07690433	GCA_002406905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/406/905/GCA_002406905.1_ASM240690v1	-	C12
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.96772	37.7	-	FXFW01	151	3075	2869	4/26/17	5/6/17	Scaffold	SC	SAMEA3893552	GCA_900178815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/815/GCA_900178815.1_19789_6_122	-	VREN2654
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	0.827899	61.3	-	CHKZ01	1767	1129	1114	4/21/15	6/13/15	Scaffold	SC	SAMEA751438	GCA_001332935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/935/GCA_001332935.1_3888_1_11	-	B272
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.90998	30.8	-	FBND01	102	2017	1877	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683419	GCA_001498015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/015/GCA_001498015.1_H132580232	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18475	64.2	-	CSWZ01	42	5196	5035	3/24/15	3/18/17	Scaffold	SC	SAMEA1464830	GCA_001215625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/625/GCA_001215625.1_7396_7_6	-	PAP054
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15737	64.1	-	CSWO01	14	5259	5081	3/24/15	3/18/17	Scaffold	SC	SAMEA1464954	GCA_001215645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/645/GCA_001215645.1_7396_7_38	-	PAP086
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.64003	31.4	-	FBPI01	23	1689	1603	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683467	GCA_001498035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/035/GCA_001498035.1_H090660740	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	1.5939	63.5	-	CIGY01	2720	2238	2213	4/21/15	6/13/15	Scaffold	SC	SAMEA751439	GCA_001332955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/955/GCA_001332955.1_3888_1_12	-	B273
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.08785	37.5	-	FXFY01	149	3212	2974	4/26/17	5/6/17	Scaffold	SC	SAMEA3893528	GCA_900178825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/825/GCA_900178825.1_19789_6_112	-	VREN2300
Klebsiella pneumoniae	573	PRJNA408064	408064	Proteobacteria	Gammaproteobacteria	5.44498	57.2	-	NXFL01	147	5491	5058	10/1/17	10/1/17	Scaffold	Christian Medical College	SAMN07690980	GCA_002406915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/406/915/GCA_002406915.1_ASM240691v1	-	C16
Vibrio parahaemolyticus	670	PRJNA378440	378440	Proteobacteria	Gammaproteobacteria	5.37525	45.3	-	MYFG01	514	5223	4923	4/28/17	5/3/17	Contig	UT Southwestern Medical Center	SAMN06546663	GCA_002114585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/585/GCA_002114585.1_ASM211458v1	28432099	12-297/B
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.1523	28.6	-	FAGZ01	444	3770	3653	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664267	GCA_900013815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/815/GCA_900013815.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.02435	47.5	-	MSEM01	98	3817	3676	3/31/17	4/6/17	Scaffold	Univ. of Maryland	SAMN06144937	GCA_002076425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/425/GCA_002076425.1_ASM207642v1	28219321	1Mo
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.09253	68.2	-	CIGS01	63	7302	6787	4/21/15	3/27/17	Scaffold	SC	SAMEA807048	GCA_001321525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/525/GCA_001321525.1_7909_4_7	-	C40
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.74006	50.7	-	CWWL01	406	5317	4445	7/16/15	2/24/17	Scaffold	SC	SAMEA3345101	GCA_001259535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/535/GCA_001259535.1_Sg_201405267_CCAACA_L001	-	201405267_1
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04933	41.2	-	FISC01	25	2059	1948	2/10/16	3/19/17	Contig	SC	SAMEA1566141	GCA_900061415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/415/GCA_900061415.1_8525_5_91	-	01ZN-TG183
Streptococcus agalactiae	1311	PRJNA392216	392216	Terrabacteria group	Firmicutes	2.12669	35.5	-	NKPZ01	106	2149	2029	8/23/17	8/25/17	Contig	Moredun Research Institute	SAMN07285928	GCA_002266925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/925/GCA_002266925.1_ASM226692v1	-	14-107
Acinetobacter baumannii 45002_4	1310898	PRJNA194975	194975	Proteobacteria	Gammaproteobacteria	4.0042	39.1	-	JFUX01	83	3957	3701	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570432	GCA_000589815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/815/GCA_000589815.1_ASM58981v1	-	45002_4
Pseudomonas aeruginosa	287	PRJEB7395	270735	Proteobacteria	Gammaproteobacteria	7.12369	65.9	-	CDAZ01	32	6881	6477	12/17/14	3/17/17	Contig	CEBITEC	SAMEA2786265	GCA_001051345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/345/GCA_001051345.1_PAMH19	-	MH19
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.10752	51.8	-	FEUU01	86	2418	2080	2/9/16	3/21/17	Scaffold	SC	SAMEA2673958	GCA_900031055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/055/GCA_900031055.1_14355_6_74	-	2842STDY5881223
Helicobacter pylori	210	PRJNA295620	295620	Proteobacteria	delta/epsilon subdivisions	1.56339	38.9	-	LJXN02	26	1554	1403	11/19/15	3/28/17	Scaffold	University of Malaya-University of Western Australia	SAMN04076431	GCA_001446375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/375/GCA_001446375.2_ASM144637v2	-	UM137S
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.24796	39.5	-	CMOD01	117	2510	2240	3/23/15	3/11/17	Contig	SC	SAMEA2061494	GCA_001106385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/385/GCA_001106385.1_9803_7_24	-	6A
Escherichia coli KTE15	1169334	PRJNA157587	157587	Proteobacteria	Gammaproteobacteria	5.25386	50.6	-	ANST01	13	5406	5033	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00847652	GCA_000350745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/745/GCA_000350745.1_Esch_coli_KTE15_V1	-	KTE15
Mycobacterium tuberculosis TKK-01-0026	1267360	PRJNA183519	183519	Terrabacteria group	Actinobacteria	4.40822	65.6	-	JLYV01	3	4287	4121	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01828247	GCA_000659105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/105/GCA_000659105.1_Myco_tube_TKK-01-0026_V3	-	TKK-01-0026
Listeria monocytogenes	1639	PRJEB10776	310503	Terrabacteria group	Firmicutes	3.0051	37.8	-	CYWJ01	22	3063	2990	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540877	GCA_001565335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/335/GCA_001565335.1_LM08-01457_assembly	-	LM08-01457
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.81798	30.4	-	MJZF01	47	1893	1684	10/4/16	4/10/17	Contig	University of California at Davis	SAMN04532408	GCA_001763695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/695/GCA_001763695.1_ASM176369v1	-	BCW_6910
Salmonella enterica subsp. enterica serovar Enteritidis str. 648901 6-18	984230	PRJNA62829	62829	Proteobacteria	Gammaproteobacteria	4.73265	52	-	ALFA01	55	4881	4597	7/18/12	5/19/17	Contig	FDA	SAMN01041133	GCA_000280435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/435/GCA_000280435.1_ASM28043v1	23045502	648901 6-18
Staphylococcus aureus SJOS6052	1409362	PRJNA223682	223682	Terrabacteria group	Firmicutes	2.86559	32.8	-	JBOH01	36	2996	2860	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381423	GCA_000537935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/935/GCA_000537935.1_Stap_aure_SJOS6052_V1	-	SJOS6052
Staphylococcus aureus LAMC0024	1409363	PRJNA223683	223683	Terrabacteria group	Firmicutes	2.92602	32.7	-	JBOG01	21	3108	2943	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381424	GCA_000537955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/955/GCA_000537955.1_Stap_aure_LAMC0024_V1	-	LAMC0024
Salmonella enterica subsp. enterica serovar Enteritidis str. 50-3079	1090945	PRJNA73685	73685	Proteobacteria	Gammaproteobacteria	4.69243	52.1	-	ALFB01	45	4794	4549	7/18/12	5/19/17	Contig	FDA	SAMN01041094	GCA_000280455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/455/GCA_000280455.1_ASM28045v1	23045502	50-3079
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.72367	30.6	-	MJZI01	45	1804	1665	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532412	GCA_001763755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/755/GCA_001763755.1_ASM176375v1	-	BCW_6919
Listeria monocytogenes	1639	PRJEB10777	310504	Terrabacteria group	Firmicutes	2.90249	37.8	-	CYWK01	16	2914	2839	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540878	GCA_001565355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/355/GCA_001565355.1_LM08-01516_assembly	-	LM08-01516
Mycobacterium tuberculosis TKK-01-0032	1267361	PRJNA183520	183520	Terrabacteria group	Actinobacteria	4.41294	65.5	-	JLYP01	5	4292	4133	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01828248	GCA_000659125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/125/GCA_000659125.1_Myco_tube_TKK-01-0032_V3	-	TKK-01-0032
Escherichia coli KTE16	1169335	PRJNA157589	157589	Proteobacteria	Gammaproteobacteria	5.20687	50.6	-	ANSU01	13	5381	5035	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00847653	GCA_000350765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/765/GCA_000350765.1_Esch_coli_KTE16_V1	-	KTE16
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.03643	39.7	-	CPOT01	73	2234	2016	3/23/15	3/11/17	Contig	SC	SAMEA1020597	GCA_001106425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/425/GCA_001106425.1_6289_7_1	-	SN1157
Helicobacter pylori	210	PRJNA298418	298418	Proteobacteria	delta/epsilon subdivisions	1.60851	39	-	LQNC02	58	1599	1429	1/28/16	3/28/17	Scaffold	University of Malaya-University of Western Australia	SAMN04159033	GCA_001542485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/485/GCA_001542485.2_ASM154248v2	-	UM400AR
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16727	51.8	-	FEVC01	95	2513	2121	2/9/16	3/21/17	Scaffold	SC	SAMEA2674004	GCA_900031065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/065/GCA_900031065.1_14355_6_92	-	2842STDY5881241
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.47832	66.3	-	JWEW01	337	6206	5936	7/10/15	3/17/17	Contig	University of Washington	SAMN03197012	GCA_001060185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/185/GCA_001060185.1_ASM106018v1	26230489	1046_PAER
Acinetobacter baumannii 44895_3	1310887	PRJNA194964	194964	Proteobacteria	Gammaproteobacteria	4.04936	39.3	-	JFVF01	102	3999	3718	3/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02570424	GCA_000589835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/589/835/GCA_000589835.1_ASM58983v1	-	44895_3
Streptococcus agalactiae	1311	PRJNA392216	392216	Terrabacteria group	Firmicutes	2.03929	35.4	-	NKQA01	79	2074	1964	8/23/17	8/25/17	Contig	Moredun Research Institute	SAMN07285927	GCA_002266935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/935/GCA_002266935.1_ASM226693v1	-	14-66
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04733	41.1	-	FITL01	25	2069	1941	2/10/16	3/19/17	Contig	SC	SAMEA1566077	GCA_900061435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/435/GCA_900061435.1_8525_5_17	-	FX540_1
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.70805	51	-	CXDS01	385	5051	4546	7/17/15	2/25/17	Scaffold	SC	SAMEA954815	GCA_001259615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/615/GCA_001259615.1_5236_8_6	-	Sh5827_441094
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.10067	68.2	-	CFXD01	77	7316	6795	3/15/15	3/26/17	Scaffold	SC	SAMEA807050	GCA_001321545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/545/GCA_001321545.1_7909_4_5	-	C38
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.02578	47.5	-	MSEQ01	107	3818	3675	3/31/17	4/6/17	Scaffold	Univ. of Maryland	SAMN06144942	GCA_002076465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/465/GCA_002076465.1_ASM207646v1	28219321	O3MU
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.22494	28.9	-	FAHI01	1348	3836	3618	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664276	GCA_900013845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/845/GCA_900013845.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA378439	378439	Proteobacteria	Gammaproteobacteria	5.34246	45.2	-	MYFF01	514	5192	4846	4/28/17	5/3/17	Contig	UT Southwestern Medical Center	SAMN06546662	GCA_002114595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/595/GCA_002114595.1_ASM211459v1	28432099	12-009A/1335
Klebsiella pneumoniae	573	PRJNA408064	408064	Proteobacteria	Gammaproteobacteria	5.52752	57.1	-	NXFM01	128	5624	5194	10/1/17	10/1/17	Scaffold	Christian Medical College	SAMN07690981	GCA_002406945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/406/945/GCA_002406945.1_ASM240694v1	-	C17
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.96652	37.7	-	FXEY01	153	3068	2869	4/26/17	5/6/17	Scaffold	SC	SAMEA3893559	GCA_900178835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/835/GCA_900178835.1_19789_6_125	-	VREN2724
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	1.34916	62.9	-	CHKU01	2709	1924	1907	4/21/15	6/14/15	Scaffold	SC	SAMEA751440	GCA_001332975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/975/GCA_001332975.1_3888_1_9	-	B270
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66069	31.4	-	FBDK01	23	1724	1626	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683151	GCA_001498055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/055/GCA_001498055.1_EC4685	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.46863	64.1	-	CSWE01	42	5583	5360	3/24/15	3/18/17	Scaffold	SC	SAMEA1464882	GCA_001215845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/845/GCA_001215845.1_7396_7_28	-	PAP076
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15802	64.1	-	CSWX01	18	5255	5076	3/24/15	3/18/17	Scaffold	SC	SAMEA1464914	GCA_001215905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/905/GCA_001215905.1_7396_7_48	-	PAP096
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.7295	31.1	-	FBMT01	64	1748	1639	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683396	GCA_001498135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/135/GCA_001498135.1_SWAN372	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	0.708503	60.7	-	CFYQ01	1609	974	961	3/15/15	6/13/15	Scaffold	SC	SAMEA751441	GCA_001332995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/332/995/GCA_001332995.1_3888_1_10	-	B271
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.99595	37.7	-	FXEL01	160	3114	2902	4/26/17	5/6/17	Scaffold	SC	SAMEA3893919	GCA_900178845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/845/GCA_900178845.1_19789_5_83	-	VREN2617
Klebsiella pneumoniae	573	PRJNA408064	408064	Proteobacteria	Gammaproteobacteria	5.52349	57.1	-	NXFN01	114	5624	5183	10/1/17	10/1/17	Scaffold	Christian Medical College	SAMN07690982	GCA_002406965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/406/965/GCA_002406965.1_ASM240696v1	-	C18
Vibrio parahaemolyticus	670	PRJNA378441	378441	Proteobacteria	Gammaproteobacteria	5.29521	45.3	-	MYFH01	577	5091	4823	4/28/17	5/3/17	Contig	UT Southwestern Medical Center	SAMN06546664	GCA_002114605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/605/GCA_002114605.1_ASM211460v1	28432099	13-306D/4
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.25157	28.9	-	FAHN01	985	3907	3705	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664278	GCA_900013865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/865/GCA_900013865.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.04861	47.5	-	MSEU01	119	3839	3695	3/31/17	4/6/17	Scaffold	Univ. of Maryland	SAMN06144946	GCA_002076475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/475/GCA_002076475.1_ASM207647v1	28219321	39Ki
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08857	68.2	-	CIJK01	63	7303	6789	4/21/15	3/26/17	Scaffold	SC	SAMEA807051	GCA_001321565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/565/GCA_001321565.1_7909_4_2	-	C35
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.62868	50.7	-	CXEJ01	434	4994	4417	7/16/15	2/24/17	Scaffold	SC	SAMEA954539	GCA_001259655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/655/GCA_001259655.1_5417_2_11	-	CS6_1361402
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.11417	41.1	-	FIGC01	62	2156	2013	2/10/16	3/19/17	Contig	SC	SAMEA1316570	GCA_900061895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/895/GCA_900061895.1_7114_5_26	-	LSS26
Streptococcus agalactiae	1311	PRJNA392218	392218	Terrabacteria group	Firmicutes	1.84253	35.3	-	NKQD01	99	1970	1761	8/23/17	8/23/17	Contig	Moredun Research Institute	SAMN07285930	GCA_002266985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/985/GCA_002266985.1_ASM226698v1	-	14-98
Acinetobacter baumannii 24975_4	1310948	PRJNA195025	195025	Proteobacteria	Gammaproteobacteria	4.02502	39.2	-	JGAH01	96	3982	3730	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614550	GCA_000591575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/575/GCA_000591575.1_ASM59157v1	-	24975_4
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.50656	66.3	-	JWDS01	459	6271	5913	7/10/15	3/17/17	Contig	University of Washington	SAMN03197042	GCA_001061875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/875/GCA_001061875.1_ASM106187v1	26230489	1079_PAER
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.18082	51.3	-	FERE01	102	2506	2152	2/9/16	3/19/17	Scaffold	SC	SAMEA2673891	GCA_900031385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/385/GCA_900031385.1_14355_4_39	-	2842STDY5880996
Helicobacter pylori	210	PRJNA342930	342930	Proteobacteria	delta/epsilon subdivisions	1.62932	39	-	MJMX01	27	1606	1437	1/9/17	3/28/17	Scaffold	National University of Singapore	SAMN05804595	GCA_001940035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/035/GCA_001940035.1_ASM194003v1	-	132A
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.04932	39.7	-	CMFL01	66	2264	2041	3/21/15	3/11/17	Contig	SC	SAMEA1028666	GCA_001106465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/465/GCA_001106465.1_7011_6_14	-	SMRU2822
Escherichia coli KTE21	1169340	PRJNA157599	157599	Proteobacteria	Gammaproteobacteria	5.59097	50.5	-	ANSV01	29	5891	5463	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00847658	GCA_000350785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/785/GCA_000350785.1_Esch_coli_KTE21_V1	-	KTE21
Mycobacterium tuberculosis TKK-01-0069	1267362	PRJNA183521	183521	Terrabacteria group	Actinobacteria	4.40604	65.6	-	JLXE01	2	4291	4125	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01828249	GCA_000659145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/145/GCA_000659145.1_Myco_tube_TKK-01-0069_V3	-	TKK-01-0069
Listeria monocytogenes	1639	PRJEB10778	310505	Terrabacteria group	Firmicutes	2.91224	37.9	-	CYWN01	31	2956	2891	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540879	GCA_001565375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/375/GCA_001565375.1_LM09-00261_assembly	-	LM09-00261
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.70021	30.5	-	MJZN01	40	1772	1633	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532430	GCA_001763855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/855/GCA_001763855.1_ASM176385v1	-	BCW_6953
Salmonella enterica subsp. enterica serovar Enteritidis str. 58-6482	1116476	PRJNA77695	77695	Proteobacteria	Gammaproteobacteria	4.70243	52.2	-	ALFC01	46	4796	4476	7/18/12	5/19/17	Contig	FDA	SAMN01041104	GCA_000280475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/475/GCA_000280475.1_ASM28047v1	23045502	58-6482
Staphylococcus aureus SJOS6053	1409365	PRJNA223685	223685	Terrabacteria group	Firmicutes	3.0243	32.7	-	JBOE01	55	3164	3010	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381426	GCA_000537975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/975/GCA_000537975.1_Stap_aure_SJOS6053_V1	-	SJOS6053
Staphylococcus aureus AMMC6040	1409367	PRJNA223687	223687	Terrabacteria group	Firmicutes	2.8847	32.7	-	JBOC01	9	3032	2867	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381428	GCA_000537995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/995/GCA_000537995.1_Stap_aure_AMMC6040_V1	-	AMMC6040
Salmonella enterica subsp. enterica serovar Typhi str. CR0063	1192853	PRJNA167146	167146	Proteobacteria	Gammaproteobacteria	4.54473	51.7	-	AKIC01	538	5007	4373	7/30/12	5/19/17	Contig	University of Hyderabad	SAMN02415290	GCA_000282855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/855/GCA_000282855.1_SalTypCR0063_1.0	23234298	CR0063
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.88112	30.1	-	MJZO01	81	1933	1733	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532431	GCA_001763865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/865/GCA_001763865.1_ASM176386v1	-	BCW_6954
Listeria monocytogenes	1639	PRJEB10779	310506	Terrabacteria group	Firmicutes	3.04922	37.9	-	CYWP01	19	3141	3066	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540880	GCA_001565395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/395/GCA_001565395.1_LM09-00277_assembly	-	LM09-00277
Mycobacterium tuberculosis TKK-01-0072	1267363	PRJNA183522	183522	Terrabacteria group	Actinobacteria	4.42779	65.5	-	JLXB01	3	4297	4120	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01828250	GCA_000659165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/165/GCA_000659165.1_Myco_tube_TKK-01-0072_V3	-	TKK-01-0072
Escherichia coli KTE25	1169344	PRJNA157607	157607	Proteobacteria	Gammaproteobacteria	4.99818	50.4	-	ANSW01	6	5131	4832	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00847662	GCA_000350805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/805/GCA_000350805.1_Esch_coli_KTE25_V1	-	KTE25
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.13674	39.6	-	CKYT01	82	2382	2125	3/21/15	3/4/17	Contig	SC	SAMEA1025997	GCA_001106565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/565/GCA_001106565.1_6840_1_11	-	SMRU1763
Helicobacter pylori	210	PRJNA360417	360417	Proteobacteria	delta/epsilon subdivisions	1.6631	39	-	MTWJ01	51	1634	1476	2/13/17	2/22/17	Scaffold	Vanderbilt University Medical Center	SAMN06246757	GCA_001997965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/965/GCA_001997965.1_ASM199796v1	-	PZ5005_3A3
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12069	51.8	-	FESP01	93	2494	2158	2/9/16	3/19/17	Scaffold	SC	SAMEA2673849	GCA_900031395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/395/GCA_900031395.1_14355_5_26	-	2842STDY5881079
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.54085	66.3	-	JUXI01	362	6294	5995	7/10/15	3/17/17	Contig	University of Washington	SAMN03197884	GCA_001065925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/925/GCA_001065925.1_ASM106592v1	26230489	681_PAER
Acinetobacter baumannii 25561_2	1310956	PRJNA195033	195033	Proteobacteria	Gammaproteobacteria	4.10368	39.1	-	JGAC01	106	4097	3831	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614555	GCA_000591595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/595/GCA_000591595.1_ASM59159v1	-	25561_2
Streptococcus agalactiae	1311	PRJNA387519	387519	Terrabacteria group	Firmicutes	2.05968	35.4	-	NHPO01	18	2142	1988	8/30/17	9/1/17	Contig	Christian Medical College	SAMN07156263	GCA_002278655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/655/GCA_002278655.1_ASM227865v1	-	VB11227
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	1.98086	41.3	-	FIIO01	50	1967	1824	2/10/16	3/19/17	Contig	SC	SAMEA1316569	GCA_900061905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/905/GCA_900061905.1_7114_5_91	-	LSS91
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.66721	50.7	-	CXKP01	432	5246	4485	7/16/15	2/24/17	Scaffold	SC	SAMEA2003917	GCA_001259675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/675/GCA_001259675.1_8290_4_46	-	109112
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.09454	68.2	-	CHKY01	67	7312	6789	4/21/15	3/26/17	Scaffold	SC	SAMEA807053	GCA_001321585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/585/GCA_001321585.1_7907_5_33	-	C33
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.04424	47.5	-	MSEX01	113	3837	3687	3/31/17	4/6/17	Scaffold	Univ. of Maryland	SAMN06144951	GCA_002076535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/535/GCA_002076535.1_ASM207653v1	28219321	31Ki
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.15924	28.6	-	FAIC01	310	3797	3687	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664295	GCA_900013895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/895/GCA_900013895.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA327110	327110	Proteobacteria	Gammaproteobacteria	5.19123	45.2	-	MBOZ01	30	5048	4812	5/16/17	5/24/17	Contig	Health Canada	SAMN05301461	GCA_002144555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/555/GCA_002144555.1_ASM214455v1	-	09-3216_100
Klebsiella pneumoniae	573	PRJNA408064	408064	Proteobacteria	Gammaproteobacteria	5.53778	57	-	NXFK01	161	5639	5133	10/1/17	10/1/17	Scaffold	Christian Medical College	SAMN07690979	GCA_002406975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/406/975/GCA_002406975.1_ASM240697v1	-	C15
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.96864	37.7	-	FXEJ01	157	3062	2864	4/26/17	5/6/17	Scaffold	SC	SAMEA3893563	GCA_900178855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/855/GCA_900178855.1_19789_6_126	-	VREN2770
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	0.906188	61.5	-	CIGT01	1965	1255	1241	4/21/15	6/14/15	Scaffold	SC	SAMEA751442	GCA_001333015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/015/GCA_001333015.1_3888_1_4	-	B276
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.64817	31.4	-	FBDS01	28	1695	1599	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683158	GCA_001498155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/155/GCA_001498155.1_SS_2295	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.46476	64.1	-	CSZX01	36	5599	5211	3/24/15	3/18/17	Scaffold	SC	SAMEA1317694	GCA_001215945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/945/GCA_001215945.1_7520_7_50	-	PAP170
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.46192	64.1	-	CSXX01	42	5584	5355	3/24/15	3/18/17	Scaffold	SC	SAMEA1464885	GCA_001215965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/965/GCA_001215965.1_7396_8_67	-	PAP115
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.64148	31.4	-	FBCU01	19	1707	1615	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683138	GCA_001498175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/175/GCA_001498175.1_EC4383	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.61111	67.3	-	CFZR01	1243	3630	3578	3/15/15	6/13/15	Scaffold	SC	SAMEA751450	GCA_001333095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/095/GCA_001333095.1_5515_6_2	-	B112
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.073	37.5	-	FXFU01	151	3188	2972	4/26/17	5/6/17	Scaffold	SC	SAMEA3893526	GCA_900178865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/865/GCA_900178865.1_19789_6_111	-	VREN2299
Klebsiella pneumoniae	573	PRJNA408064	408064	Proteobacteria	Gammaproteobacteria	5.52873	57.1	-	NXFO01	163	5642	5152	10/1/17	10/1/17	Scaffold	Christian Medical College	SAMN07690983	GCA_002406995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/406/995/GCA_002406995.1_ASM240699v1	-	C22
Vibrio parahaemolyticus	670	PRJNA327110	327110	Proteobacteria	Gammaproteobacteria	5.07896	45.3	-	MBOY01	35	4917	4680	5/16/17	5/24/17	Contig	Health Canada	SAMN05301460	GCA_002144575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/575/GCA_002144575.1_ASM214457v1	-	09-3216_1
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.12359	28.9	-	FAID01	255	3778	3662	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664297	GCA_900013905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/905/GCA_900013905.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.02501	47.5	-	MSEV01	96	3816	3679	3/31/17	4/6/17	Scaffold	Univ. of Maryland	SAMN06144953	GCA_002076545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/545/GCA_002076545.1_ASM207654v1	28219321	O7MU
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08394	68.2	-	CGHK01	74	7297	6774	3/15/15	3/26/17	Scaffold	SC	SAMEA807054	GCA_001321605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/605/GCA_001321605.1_7909_4_1	-	C34
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.73512	50.6	-	CWYK01	471	5229	4528	7/16/15	2/24/17	Scaffold	SC	SAMEA2445709	GCA_001259695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/695/GCA_001259695.1_12971_8_28	-	H092920825
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.16656	41	-	FIIR01	54	2177	2015	2/10/16	3/19/17	Contig	SC	SAMEA1316535	GCA_900062065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/065/GCA_900062065.1_7114_5_95	-	LSS95
Streptococcus agalactiae	1311	PRJNA387519	387519	Terrabacteria group	Firmicutes	1.98164	35.2	-	NHPN01	40	2030	1894	8/30/17	9/1/17	Contig	Christian Medical College	SAMN07156264	GCA_002278755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/755/GCA_002278755.1_ASM227875v1	-	VB12497
Acinetobacter baumannii 25561_7	1310961	PRJNA195038	195038	Proteobacteria	Gammaproteobacteria	4.12574	39.1	-	JGAB01	143	4138	3853	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614557	GCA_000591615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/615/GCA_000591615.1_ASM59161v1	-	25561_7
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.44525	66.3	-	JUVV01	560	6361	5913	7/10/15	3/17/17	Contig	University of Washington	SAMN03197923	GCA_001066075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/075/GCA_001066075.1_ASM106607v1	26230489	719_PAER
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11901	51.7	-	FETI01	94	2487	2159	2/9/16	4/2/17	Scaffold	SC	SAMEA2673965	GCA_900031405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/405/GCA_900031405.1_14355_5_60	-	2842STDY5881113
Helicobacter pylori	210	PRJNA360417	360417	Proteobacteria	delta/epsilon subdivisions	1.6337	39.2	-	MTWK01	53	1602	1447	2/13/17	2/22/17	Scaffold	Vanderbilt University Medical Center	SAMN06246771	GCA_001997995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/995/GCA_001997995.1_ASM199799v1	-	PZ5006_3A3
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.04584	39.7	-	CLWP01	57	2244	2032	3/21/15	3/4/17	Contig	SC	SAMEA1028701	GCA_001106685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/685/GCA_001106685.1_6983_5_1	-	SMRU2305
Escherichia coli KTE26	1169345	PRJNA157609	157609	Proteobacteria	Gammaproteobacteria	5.30884	50.7	-	ANSX01	11	5468	5186	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00847663	GCA_000350825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/825/GCA_000350825.1_Esch_coli_KTE26_V1	-	KTE26
Mycobacterium tuberculosis TKK-01-0080	1267364	PRJNA183523	183523	Terrabacteria group	Actinobacteria	4.41741	65.5	-	JLWT01	6	4278	4088	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01828251	GCA_000659185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/185/GCA_000659185.1_Myco_tube_TKK-01-0080_V3	-	TKK-01-0080
Listeria monocytogenes	1639	PRJEB10780	310507	Terrabacteria group	Firmicutes	2.96644	37.8	-	CYWQ01	20	3007	2939	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540881	GCA_001565415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/415/GCA_001565415.1_LM09-00335_assembly	-	LM09-00335
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.78345	30.4	-	MJZQ01	57	1836	1641	10/4/16	4/10/17	Contig	University of California at Davis	SAMN04532433	GCA_001763915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/915/GCA_001763915.1_ASM176391v1	-	BCW_6956
Salmonella enterica subsp. enterica serovar Typhi str. CR0044	1176488	PRJNA160187	160187	Proteobacteria	Gammaproteobacteria	4.69671	52.1	-	AKZO01	201	4968	4507	7/30/12	5/19/17	Contig	University of Malaya	SAMN02415239	GCA_000282875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/875/GCA_000282875.1_SalTypSTCR0044_1.0	23045488	CR0044
Staphylococcus aureus SJOS6071	1409368	PRJNA223688	223688	Terrabacteria group	Firmicutes	2.92591	32.8	-	JBOB01	25	3074	2907	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381429	GCA_000538015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/015/GCA_000538015.1_Stap_aure_SJOS6071_V1	-	SJOS6071
Staphylococcus aureus AMMC6051	1409370	PRJNA223690	223690	Terrabacteria group	Firmicutes	2.92043	32.7	-	JBNZ01	17	3085	2924	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381431	GCA_000538035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/035/GCA_000538035.1_Stap_aure_AMMC6051_V1	-	AMMC6051
Salmonella enterica subsp. enterica serovar Heidelberg str. 41563	1124941	PRJNA78487	78487	Proteobacteria	Gammaproteobacteria	4.91816	52.1	-	AJGX01	81	5074	4812	3/27/12	5/19/17	Contig	FDA	SAMN01814037	GCA_000284755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/755/GCA_000284755.1_ASM28475v1	22628505	41563
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.69934	30.5	-	MJZT01	48	1765	1633	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532436	GCA_001763965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/965/GCA_001763965.1_ASM176396v1	-	BCW_6959
Listeria monocytogenes	1639	PRJEB10781	310508	Terrabacteria group	Firmicutes	2.87488	37.9	-	CYWR01	20	2885	2823	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540882	GCA_001565435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/435/GCA_001565435.1_LM09-00372_assembly	-	LM09-00372
Mycobacterium tuberculosis TKK_02_0004	1295720	PRJNA190927	190927	Terrabacteria group	Actinobacteria	4.40519	65.6	-	JMBG01	1	4283	4117	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925614	GCA_000659205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/205/GCA_000659205.1_Myco_tube_TKK_02_0004_V1	-	TKK_02_0004
Escherichia coli KTE28	1169347	PRJNA157613	157613	Proteobacteria	Gammaproteobacteria	5.0544	50.4	-	ANSY01	12	5135	4855	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00847665	GCA_000350845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/845/GCA_000350845.1_Esch_coli_KTE28_V1	-	KTE28
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11955	39.8	-	CKPG01	69	2321	2100	3/21/15	3/4/17	Contig	SC	SAMEA1024659	GCA_001106725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/725/GCA_001106725.1_6680_4_24	-	SMRU912
Helicobacter pylori	210	PRJNA360417	360417	Proteobacteria	delta/epsilon subdivisions	1.67372	38.9	-	MTWM01	44	1639	1481	2/13/17	2/22/17	Scaffold	Vanderbilt University Medical Center	SAMN06246899	GCA_001998045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/045/GCA_001998045.1_ASM199804v1	-	PZ5019_3A3
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.1867	51.4	-	FEUQ01	109	2544	2178	2/9/16	3/19/17	Scaffold	SC	SAMEA2673931	GCA_900031415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/415/GCA_900031415.1_14355_6_63	-	2842STDY5881212
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.72228	66.3	-	JUUU01	664	6542	6115	7/10/15	3/17/17	Contig	University of Washington	SAMN03197950	GCA_001066185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/185/GCA_001066185.1_ASM106618v1	26230489	744_PAER
Acinetobacter baumannii 25561_1	1310955	PRJNA195032	195032	Proteobacteria	Gammaproteobacteria	4.15439	39.2	-	JGAD01	118	4137	3868	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614554	GCA_000591635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/635/GCA_000591635.1_ASM59163v1	-	25561_1
Streptococcus agalactiae	1311	PRJNA387519	387519	Terrabacteria group	Firmicutes	2.06536	35.3	-	NHPM01	31	2125	1978	8/30/17	9/1/17	Contig	Christian Medical College	SAMN07156265	GCA_002278775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/775/GCA_002278775.1_ASM227877v1	-	VBP4522
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.01933	41.2	-	FIIU01	25	2016	1920	2/10/16	3/19/17	Contig	SC	SAMEA1316682	GCA_900062075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/075/GCA_900062075.1_7054_7_2	-	LSS98
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.87593	50.5	-	CWZB01	420	5389	4699	7/16/15	2/24/17	Scaffold	SC	SAMEA2445737	GCA_001259735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/735/GCA_001259735.1_12971_8_48	-	H135120399
Burkholderia pseudomallei	28450	PRJEB2119	203892	Proteobacteria	Betaproteobacteria	7.08813	68.2	-	CGFR01	67	7304	6791	3/15/15	3/26/17	Scaffold	SC	SAMEA807055	GCA_001321625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/625/GCA_001321625.1_7909_4_22	-	C55
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.02286	47.5	-	MSER01	102	3811	3673	3/31/17	4/6/17	Scaffold	Univ. of Maryland	SAMN06144943	GCA_002076575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/575/GCA_002076575.1_ASM207657v1	28219321	O3S
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.23994	28.2	-	FAIF01	280	3940	3812	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664298	GCA_900013915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/915/GCA_900013915.1_Peptoclostridium_difficile	-	-
Vibrio parahaemolyticus	670	PRJNA327110	327110	Proteobacteria	Gammaproteobacteria	5.0704	45.3	-	MBPA01	40	4883	4651	5/16/17	5/24/17	Contig	Health Canada	SAMN05301462	GCA_002144585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/585/GCA_002144585.1_ASM214458v1	-	HS-13-1_1
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.98304	37.7	-	FXEW01	162	3093	2875	4/26/17	5/6/17	Scaffold	SC	SAMEA3893920	GCA_900178875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/875/GCA_900178875.1_19789_5_84	-	VREN2657
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.535	67.1	-	CVJM01	1379	3608	3557	4/2/15	6/14/15	Scaffold	SC	SAMEA751481	GCA_001333475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/475/GCA_001333475.1_6062_1_4	-	B296
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.67919	31.3	-	FBPL01	29	1753	1655	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683471	GCA_001498195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/195/GCA_001498195.1_H124620276b	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15805	64.1	-	CSWQ01	14	5255	5080	3/24/15	3/18/17	Scaffold	SC	SAMEA1464936	GCA_001216005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/005/GCA_001216005.1_7396_7_39	-	PAP087
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.01253	64.2	-	CSXF01	24	5058	4848	3/24/15	3/18/17	Scaffold	SC	SAMEA1464843	GCA_001216025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/025/GCA_001216025.1_7396_8_51	-	PAP099
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.84732	31.1	-	FBGK01	82	1909	1763	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683231	GCA_001498215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/215/GCA_001498215.1_SWAN195-1	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.50674	67.2	-	CFYN01	1873	3617	3569	3/15/15	6/13/15	Scaffold	SC	SAMEA751499	GCA_001333675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/675/GCA_001333675.1_5476_7_4	-	B020
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.08894	37.5	-	FXFM01	160	3212	2973	4/26/17	5/6/17	Scaffold	SC	SAMEA3893531	GCA_900178885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/885/GCA_900178885.1_19789_6_113	-	VREN2301
Vibrio parahaemolyticus	670	PRJNA327110	327110	Proteobacteria	Gammaproteobacteria	5.05298	45.4	-	MBPC01	41	4859	4629	5/16/17	5/24/17	Contig	Health Canada	SAMN05301509	GCA_002144625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/625/GCA_002144625.1_ASM214462v1	-	HS-06-05_1
Klebsiella pneumoniae JH1	1037890	PRJNA67489	67489	Proteobacteria	Gammaproteobacteria	5.53425	57.2	-	AFQK01	118	5573	5323	7/5/11	5/18/17	Contig	GlaxoSmithKline	SAMN02469846	GCA_000219945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/945/GCA_000219945.2_ASM21994v2	21746949	JH1
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.22433	28.9	-	FAII01	1087	3874	3699	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664299	GCA_900013925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/925/GCA_900013925.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.02344	47.5	-	MSEP01	102	3811	3674	3/31/17	4/6/17	Scaffold	Univ. of Maryland	SAMN06144941	GCA_002076585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/585/GCA_002076585.1_ASM207658v1	28219321	O5MU
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.07906	68.2	-	CFVL01	66	7325	6846	3/15/15	3/26/17	Scaffold	SC	SAMEA949289	GCA_001326895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/895/GCA_001326895.1_7910_7_26	-	2746b
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.75621	50.7	-	CXIY01	386	5369	4583	7/17/15	2/24/17	Scaffold	SC	SAMEA2004851	GCA_001259755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/755/GCA_001259755.1_8289_7_83	-	86318
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.15956	41	-	FIKL01	44	2166	1988	2/10/16	3/19/17	Contig	SC	SAMEA1316637	GCA_900062085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/085/GCA_900062085.1_7054_7_42	-	SS1042
Streptococcus agalactiae	1311	PRJNA387519	387519	Terrabacteria group	Firmicutes	2.07012	35.4	-	NHPL01	119	2099	1940	8/30/17	8/30/17	Contig	Christian Medical College	SAMN07156266	GCA_002278795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/278/795/GCA_002278795.1_ASM227879v1	-	VBP3124
Acinetobacter baumannii 24975_7	1310951	PRJNA195028	195028	Proteobacteria	Gammaproteobacteria	3.99227	39.2	-	JGAF01	90	3926	3700	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614552	GCA_000591655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/655/GCA_000591655.1_ASM59165v1	-	24975_7
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.88066	66.1	-	JUQJ01	563	6680	6261	7/10/15	3/17/17	Contig	University of Washington	SAMN03198065	GCA_001066625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/625/GCA_001066625.1_ASM106662v1	26230489	857_PAER
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12846	51.7	-	FEVE01	74	2480	2168	2/9/16	3/19/17	Scaffold	SC	SAMEA2674056	GCA_900031425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/425/GCA_900031425.1_14324_4_4	-	2842STDY5881249
Helicobacter pylori	210	PRJNA360417	360417	Proteobacteria	delta/epsilon subdivisions	1.62682	39	-	MTWP01	53	1601	1439	2/13/17	2/22/17	Scaffold	Vanderbilt University Medical Center	SAMN06250733	GCA_001998125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/125/GCA_001998125.1_ASM199812v1	-	SV340_2
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.02208	39.7	-	CKIW01	44	2234	1970	3/21/15	3/6/17	Contig	SC	SAMEA1023772	GCA_001106805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/805/GCA_001106805.1_6631_4_7	-	3
Escherichia coli KTE39	1169356	PRJNA157631	157631	Proteobacteria	Gammaproteobacteria	5.2935	50.5	-	ANSZ01	10	5482	5130	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00847674	GCA_000350865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/865/GCA_000350865.1_Esch_coli_KTE39_V1	-	KTE39
Mycobacterium tuberculosis TKK_02_0005	1295721	PRJNA190928	190928	Terrabacteria group	Actinobacteria	4.4075	65.6	-	JMBF01	1	4281	4115	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925615	GCA_000659225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/225/GCA_000659225.1_Myco_tube_TKK_02_0005_V1	-	TKK_02_0005
Listeria monocytogenes	1639	PRJEB10783	310509	Terrabacteria group	Firmicutes	3.05401	37.8	-	CYWS01	33	3123	3042	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540883	GCA_001565455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/455/GCA_001565455.1_LM09-00373_assembly	-	LM09-00373
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.78534	30.4	-	MKAB01	51	1863	1710	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532469	GCA_001764135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/135/GCA_001764135.1_ASM176413v1	-	BCW_7692
Salmonella enterica subsp. enterica serovar Heidelberg str. 41573	1128959	PRJNA80513	80513	Proteobacteria	Gammaproteobacteria	4.90877	52.1	-	AJGY01	145	5110	4738	3/27/12	5/19/17	Contig	FDA	SAMN01814038	GCA_000284775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/775/GCA_000284775.1_ASM28477v1	22628505	41573
Staphylococcus aureus GGMC6010	1409371	PRJNA223691	223691	Terrabacteria group	Firmicutes	2.94495	32.8	-	JBNY01	33	3108	2932	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381432	GCA_000538055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/055/GCA_000538055.1_Stap_aure_GGMC6010_V1	-	GGMC6010
Staphylococcus aureus CHAP6049	1409372	PRJNA223692	223692	Terrabacteria group	Firmicutes	2.74054	32.8	-	JBNX01	33	2821	2693	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381433	GCA_000538075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/075/GCA_000538075.1_Stap_aure_CHAP6049_V1	-	CHAP6049
Salmonella enterica subsp. enterica serovar Heidelberg str. 41566	1124942	PRJNA78489	78489	Proteobacteria	Gammaproteobacteria	4.90802	52.1	-	AJGZ01	101	5066	4803	3/27/12	5/19/17	Contig	FDA	SAMN01816203	GCA_000284795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/795/GCA_000284795.1_ASM28479v1	22628505	41566
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.63555	30.5	-	MKAC01	29	1720	1612	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532413	GCA_001764155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/155/GCA_001764155.1_ASM176415v1	-	BCW_6920
Listeria monocytogenes	1639	PRJEB10784	310510	Terrabacteria group	Firmicutes	2.91001	37.9	-	CYWT01	36	2922	2852	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540884	GCA_001565475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/475/GCA_001565475.1_LM09-00402_assembly	-	LM09-00402
Mycobacterium tuberculosis TKK_02_0007	1295723	PRJNA190930	190930	Terrabacteria group	Actinobacteria	4.40721	65.6	-	JMBE01	1	4282	4115	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925617	GCA_000659245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/245/GCA_000659245.1_Myco_tube_TKK_02_0007_V1	-	TKK_02_0007
Escherichia coli KTE44	1169361	PRJNA157641	157641	Proteobacteria	Gammaproteobacteria	5.24852	50.7	-	ANTA01	25	5536	5050	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00847679	GCA_000350885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/885/GCA_000350885.1_Esch_coli_KTE44_V1	-	KTE44
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05606	39.5	-	COFQ02	135	2245	2032	3/23/15	3/5/17	Contig	SC	SAMEA1463066	GCA_001106865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/865/GCA_001106865.2_7622_5_84	-	ND6047
Helicobacter pylori	210	PRJNA360417	360417	Proteobacteria	delta/epsilon subdivisions	1.66137	39.1	-	MTWS01	47	1634	1466	2/13/17	2/22/17	Scaffold	Vanderbilt University Medical Center	SAMN06251160	GCA_001998205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/205/GCA_001998205.1_ASM199820v1	-	SV397_2
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.09838	51.8	-	FEWD01	85	2399	2062	2/9/16	3/21/17	Scaffold	SC	SAMEA2674133	GCA_900031435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/435/GCA_900031435.1_14324_4_64	-	2842STDY5881309
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.87157	66	-	JUQH01	969	6913	6237	7/10/15	3/17/17	Contig	University of Washington	SAMN03198067	GCA_001066645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/645/GCA_001066645.1_ASM106664v1	26230489	859_PAER
Acinetobacter baumannii 24975_9	1310953	PRJNA195030	195030	Proteobacteria	Gammaproteobacteria	4.04368	39.2	-	JGAE01	97	3976	3711	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614553	GCA_000591675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/675/GCA_000591675.1_ASM59167v1	-	24975_9
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.22427	35.5	-	FJPX01	243	2257	2112	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888204	GCA_900073135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/135/GCA_900073135.1_SA296	-	-
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.0362	41.2	-	FIKK01	50	2079	1947	2/10/16	3/19/17	Contig	SC	SAMEA1316623	GCA_900062095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/095/GCA_900062095.1_7054_7_90	-	SS1043
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.79777	50.5	-	CWYX01	417	5331	4596	7/16/15	2/24/17	Scaffold	SC	SAMEA2445728	GCA_001259775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/775/GCA_001259775.1_12971_8_42	-	H111200322
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.09359	68.2	-	CGEX01	53	7324	6835	3/15/15	3/26/17	Scaffold	SC	SAMEA949290	GCA_001326915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/915/GCA_001326915.1_7910_7_25	-	DM15342/00
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.02298	47.5	-	MSES01	95	3810	3672	3/31/17	4/6/17	Scaffold	Univ. of Maryland	SAMN06144944	GCA_002076615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/615/GCA_002076615.1_ASM207661v1	28219321	7Mo
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.23315	28.9	-	FAIP01	1291	3883	3633	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664308	GCA_900013955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/955/GCA_900013955.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae 1162281	1037908	PRJNA67493	67493	Proteobacteria	Gammaproteobacteria	5.53502	57.3	-	AFQL01	116	5551	5331	7/5/11	5/18/17	Contig	GlaxoSmithKline	SAMN02469847	GCA_000219965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/965/GCA_000219965.2_ASM21996v2	21746949	1162281
Vibrio parahaemolyticus	670	PRJNA378314	378314	Proteobacteria	Gammaproteobacteria	4.92666	45.4	-	MWVH01	404	4738	4487	5/16/17	5/24/17	Contig	UT Southwestern Medical Center	SAMN06490120	GCA_002144645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/645/GCA_002144645.1_ASM214464v1	-	13-028/A2
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.19161	37.4	-	FXFF01	166	3343	3097	4/26/17	5/6/17	Scaffold	SC	SAMEA3893514	GCA_900178895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/895/GCA_900178895.1_19789_6_107	-	VREN2164
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	3.66961	67.5	-	CFYT01	1319	3648	3593	3/15/15	6/14/15	Scaffold	SC	SAMEA751501	GCA_001333715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/715/GCA_001333715.1_5476_7_2	-	B021
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.64015	31.4	-	FBPB01	22	1692	1604	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683457	GCA_001498235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/235/GCA_001498235.1_H054000445	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15857	64.1	-	CSYP01	14	5254	5081	3/24/15	3/18/17	Scaffold	SC	SAMEA1464837	GCA_001216045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/045/GCA_001216045.1_7396_8_89	-	PAP137
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.27896	64	-	CSYS01	46	5322	5126	3/24/15	3/18/17	Scaffold	SC	SAMEA1464858	GCA_001216065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/065/GCA_001216065.1_7396_8_90	-	PAP138
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66042	31.4	-	FBDE01	25	1729	1630	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683145	GCA_001498255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/255/GCA_001498255.1_EC4277	-	n/a
Bordetella pertussis	520	PRJEB2274	203845	Proteobacteria	Betaproteobacteria	0.875827	61.4	-	CFZH01	1812	1201	1186	3/15/15	6/13/15	Scaffold	SC	SAMEA751504	GCA_001333735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/735/GCA_001333735.1_3888_1_3	-	B275
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.96393	37.7	-	FXFH01	154	3072	2870	4/26/17	5/6/17	Scaffold	SC	SAMEA3893569	GCA_900178905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/905/GCA_900178905.1_19789_6_128	-	VREN2774
Vibrio parahaemolyticus	670	PRJNA356370	356370	Proteobacteria	Gammaproteobacteria	5.2363	45.1	-	MRTA01	74	5005	4793	5/19/17	5/24/17	Contig	Guangdong Institute of Microbiology	SAMN06112607	GCA_002150155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/155/GCA_002150155.1_ASM215015v1	-	xtf27
Klebsiella pneumoniae 1191100241	1074486	PRJNA71587	71587	Proteobacteria	Gammaproteobacteria	5.68731	57.1	-	AFXH01	394	5926	5200	8/16/11	5/18/17	Contig	Life Technologies	SAMN00699801	GCA_000223435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/223/435/GCA_000223435.2_ASM22343v2	-	1191100241
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.1337	28.8	-	FAIQ01	454	3779	3675	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664310	GCA_900013965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/965/GCA_900013965.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.02433	47.5	-	MSET01	102	3814	3676	3/31/17	4/6/17	Scaffold	Univ. of Maryland	SAMN06144945	GCA_002076635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/635/GCA_002076635.1_ASM207663v1	28219321	9Mo
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.21009	68.2	-	CHFD01	76	7516	6996	4/21/15	3/26/17	Scaffold	SC	SAMEA949303	GCA_001326935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/935/GCA_001326935.1_6998_1_19	-	EY4
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.63493	50.9	-	CXCR01	398	4980	4423	7/17/15	2/24/17	Scaffold	SC	SAMEA954725	GCA_001259815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/815/GCA_001259815.1_5236_5_3	-	Sh54178_440879
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.057	41.1	-	FISI01	24	2071	1964	2/10/16	3/19/17	Contig	SC	SAMEA1566201	GCA_900062105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/105/GCA_900062105.1_8337_6_83	-	FX14
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.1275	35.3	-	FJOP01	134	2166	2044	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888067	GCA_900073145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/145/GCA_900073145.1_SA2	-	-
Acinetobacter baumannii 25935_10	1310944	PRJNA195021	195021	Proteobacteria	Gammaproteobacteria	4.03519	39.2	-	JGAJ01	105	4011	3745	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614549	GCA_000591695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/695/GCA_000591695.1_ASM59169v1	-	25935_10
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.54052	66.3	-	JUXE01	394	6315	5976	7/10/15	3/17/17	Contig	University of Washington	SAMN03197888	GCA_001066895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/895/GCA_001066895.1_ASM106689v1	26230489	685_PAER
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.0951	51.8	-	FEWE01	86	2451	2097	2/9/16	3/21/17	Scaffold	SC	SAMEA2674136	GCA_900031445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/445/GCA_900031445.1_14324_4_65	-	2842STDY5881310
Helicobacter pylori	210	PRJNA360417	360417	Proteobacteria	delta/epsilon subdivisions	1.64379	39	-	MTWT01	41	1617	1463	2/13/17	2/22/17	Scaffold	Vanderbilt University Medical Center	SAMN06251163	GCA_001998245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/245/GCA_001998245.1_ASM199824v1	-	SV449_1
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10738	39.7	-	CKHN01	71	2260	1983	3/21/15	3/6/17	Contig	SC	SAMEA1023896	GCA_001107105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/105/GCA_001107105.1_6631_2_22	-	type strain: N
Escherichia coli KTE178	1181726	PRJNA163373	163373	Proteobacteria	Gammaproteobacteria	5.30789	50.6	-	ANTB01	11	5460	5162	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974035	GCA_000350905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/905/GCA_000350905.1_Esch_coli_KTE178_V1	-	KTE178
Mycobacterium tuberculosis TKK_02_0008	1295724	PRJNA190931	190931	Terrabacteria group	Actinobacteria	4.41082	65.6	-	JMBD01	2	4283	4111	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925618	GCA_000659265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/265/GCA_000659265.1_Myco_tube_TKK_02_0008_V1	-	TKK_02_0008
Listeria monocytogenes	1639	PRJEB10785	310511	Terrabacteria group	Firmicutes	2.93517	37.8	-	CYWU01	34	2987	2918	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540885	GCA_001565495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/495/GCA_001565495.1_LM09-00432_assembly	-	LM09-00432
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.66081	30.7	-	MKAD01	35	1743	1610	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532414	GCA_001764175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/175/GCA_001764175.1_ASM176417v1	-	BCW_6921
Salmonella enterica subsp. enterica serovar Heidelberg str. 41565	1128963	PRJNA80521	80521	Proteobacteria	Gammaproteobacteria	4.97804	51.9	-	AJHA01	163	5165	4756	3/27/12	5/19/17	Contig	FDA	SAMN01816204	GCA_000284815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/815/GCA_000284815.1_ASM28481v1	22628505	41565
Staphylococcus aureus PLAC6012	1409373	PRJNA223693	223693	Terrabacteria group	Firmicutes	2.90915	32.9	-	JBNW01	23	3055	2885	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381434	GCA_000538095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/095/GCA_000538095.1_Stap_aure_PLAC6012_V1	-	PLAC6012
Staphylococcus aureus SJOS6072	1409374	PRJNA223694	223694	Terrabacteria group	Firmicutes	3.00905	32.7	-	JBNV01	36	3174	3000	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381435	GCA_000538115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/115/GCA_000538115.1_Stap_aure_SJOS6072_V1	-	SJOS6072
Salmonella enterica subsp. enterica serovar Typhimurium str. ST1660/06	1141101	PRJNA82323	82323	Proteobacteria	Gammaproteobacteria	5.02615	52.2	-	AJTU01	8	5186	4893	8/23/12	5/19/17	Contig	The Chinese University of Hong Kong	SAMN02415265	GCA_000292755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/292/755/GCA_000292755.1_ASM29275v1	23105062	ST1660/06
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.71019	30.6	-	MKAE01	31	1797	1661	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532415	GCA_001764195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/195/GCA_001764195.1_ASM176419v1	-	BCW_6922
Listeria monocytogenes	1639	PRJEB10786	310512	Terrabacteria group	Firmicutes	2.93853	37.8	-	CYWV01	21	2985	2926	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540886	GCA_001565515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/515/GCA_001565515.1_LM09-00521_assembly	-	LM09-00521
Mycobacterium tuberculosis TKK_02_0009	1295725	PRJNA190932	190932	Terrabacteria group	Actinobacteria	4.39992	65.6	-	JLWE01	1	4277	4115	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925619	GCA_000659285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/285/GCA_000659285.1_Myco_tube_TKK_02_0009_V1	-	TKK_02_0009
Escherichia coli KTE181	1181727	PRJNA163375	163375	Proteobacteria	Gammaproteobacteria	5.36223	50.6	-	ANTC01	9	5573	5249	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974036	GCA_000350925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/925/GCA_000350925.1_Esch_coli_KTE181_V1	-	KTE181
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12852	39.6	-	CNTJ02	174	2312	2111	3/23/15	3/11/17	Contig	SC	SAMEA1032631	GCA_001107305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/305/GCA_001107305.2_6999_4_14	-	118039
Helicobacter pylori	210	PRJNA360417	360417	Proteobacteria	delta/epsilon subdivisions	1.62438	39.1	-	MTWU01	40	1619	1455	2/13/17	2/22/17	Scaffold	Vanderbilt University Medical Center	SAMN06251192	GCA_001998285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/285/GCA_001998285.1_ASM199828v1	-	SV380_1
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15678	51.5	-	FEYD01	82	2515	2152	2/9/16	3/21/17	Scaffold	SC	SAMEA2674561	GCA_900031455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/455/GCA_900031455.1_14355_7_95	-	2842STDY5881724
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.57937	66.3	-	JUWD01	295	6270	6046	7/10/15	3/17/17	Contig	University of Washington	SAMN03197915	GCA_001067065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/065/GCA_001067065.1_ASM106706v1	26230489	710_PAER
Acinetobacter baumannii 44327_8	1310992	PRJNA195070	195070	Proteobacteria	Gammaproteobacteria	4.07785	39	-	JGBU01	189	4118	3780	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644678	GCA_000591715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/715/GCA_000591715.1_ASM59171v1	-	44327_8
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.06614	35.5	-	FJOU01	142	2085	1969	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888080	GCA_900073155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/155/GCA_900073155.1_SA29	-	-
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.07664	41.2	-	FISH01	24	2097	1986	2/10/16	3/19/17	Contig	SC	SAMEA1566180	GCA_900062115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/115/GCA_900062115.1_8337_6_85	-	FX22
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.71843	50.7	-	CXLC01	395	5327	4549	7/16/15	2/24/17	Scaffold	SC	SAMEA2164635	GCA_001259835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/835/GCA_001259835.1_8290_4_89	-	124342
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.19795	68.2	-	CIGP01	72	7452	6969	4/21/15	3/26/17	Scaffold	SC	SAMEA949304	GCA_001326955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/955/GCA_001326955.1_6998_1_20	-	EY5
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.02341	47.5	-	MSFA01	99	3812	3674	3/31/17	4/6/17	Scaffold	Univ. of Maryland	SAMN06144948	GCA_002076665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/665/GCA_002076665.1_ASM207666v1	28219321	5Mo
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.43959	29.4	-	FAIU01	1510	4094	3819	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664312	GCA_900013975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/975/GCA_900013975.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae subsp. pneumoniae LZ	1177153	PRJNA159951	159951	Proteobacteria	Gammaproteobacteria	5.43175	57.1	-	AJVY01	196	5461	5171	5/16/12	5/18/17	Contig	Shanghai Jiao Tong University	SAMN02470950	GCA_000263095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/095/GCA_000263095.1_Klebphe1.0	22843590	LZ
Vibrio parahaemolyticus	670	PRJNA356223	356223	Proteobacteria	Gammaproteobacteria	5.01798	45.3	-	MRSZ01	64	4893	4647	5/19/17	5/24/17	Contig	Guangdong Institute of Microbiology	SAMN06110496	GCA_002150175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/175/GCA_002150175.1_ASM215017v1	-	xtf22
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.96708	37.7	-	FXFE01	147	3076	2870	4/26/17	5/6/17	Scaffold	SC	SAMEA3893570	GCA_900178915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/915/GCA_900178915.1_19789_6_129	-	VREN2775
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68669	31.3	-	FBQE01	34	1739	1657	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683490	GCA_001498275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/275/GCA_001498275.1_H121760164	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.26286	64.2	-	CSXT01	28	5332	5178	3/24/15	3/18/17	Scaffold	SC	SAMEA1464920	GCA_001216145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/145/GCA_001216145.1_7396_8_65	-	PAP113
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.97701	64.1	-	CSXV01	18	5016	4827	3/24/15	3/18/17	Scaffold	SC	SAMEA1464865	GCA_001216165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/165/GCA_001216165.1_7396_8_69	-	PAP117
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65491	31.4	-	FBGX01	22	1699	1608	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683246	GCA_001498295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/295/GCA_001498295.1_NCTC12567	-	n/a
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.98844	37.7	-	FXFZ01	153	3103	2888	4/26/17	5/6/17	Scaffold	SC	SAMEA3893549	GCA_900178925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/925/GCA_900178925.1_19789_6_121	-	VREN2653
Vibrio parahaemolyticus	670	PRJNA356218	356218	Proteobacteria	Gammaproteobacteria	5.1345	45.2	-	MRSY01	91	4976	4743	5/19/17	5/24/17	Contig	"Guangdong Institute of Microbiology, State Key Laboratory of Applied Microbiology Southern China; Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Guangdong Open Laboratory of Applied Microbiology"	SAMN06110481	GCA_002150185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/185/GCA_002150185.1_ASM215018v1	-	xtf19
Klebsiella pneumoniae subsp. pneumoniae KPNIH2	1087441	PRJNA73195	73195	Proteobacteria	Gammaproteobacteria	5.7248	57.2	-	AJZV01	147	5971	5623	7/24/12	5/18/17	Contig	NIH Intramural Sequencing Center	SAMN01057609	GCA_000281255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/255/GCA_000281255.1_KPNIH2_1	22914622	KPNIH2
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.48388	29	-	FAIY01	1494	4199	3939	3/31/16	4/10/17	Contig	UNIVERSITE LAVAL	SAMEA3664316	GCA_900014005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/005/GCA_900014005.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.02477	47.5	-	MSEW01	104	3812	3674	3/31/17	4/6/17	Scaffold	Univ. of Maryland	SAMN06144952	GCA_002076705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/705/GCA_002076705.1_ASM207670v1	28219321	2Mo
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.53486	67.9	-	CFVU01	112	7951	7070	3/15/15	3/26/17	Scaffold	SC	SAMEA949305	GCA_001326975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/975/GCA_001326975.1_7915_5_1	-	153
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.64591	50.7	-	CXKG01	503	5247	4474	7/17/15	2/24/17	Scaffold	SC	SAMEA2003913	GCA_001259895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/895/GCA_001259895.1_8290_4_34	-	99040
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.12744	41.2	-	FIFZ01	33	2121	1981	2/10/16	3/19/17	Contig	SC	SAMEA1316633	GCA_900062245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/245/GCA_900062245.1_7114_5_2	-	LSS2
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.11559	35.5	-	FJOX01	174	2125	1998	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888158	GCA_900073165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/165/GCA_900073165.1_SA118	-	-
Acinetobacter baumannii 44327_2	1310986	PRJNA195064	195064	Proteobacteria	Gammaproteobacteria	4.10496	38.9	-	JGBY01	177	4118	3804	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644674	GCA_000591735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/735/GCA_000591735.1_ASM59173v1	-	44327_2
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.45421	66.3	-	JUVT01	359	6272	5965	7/10/15	3/17/17	Contig	University of Washington	SAMN03197925	GCA_001067105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/105/GCA_001067105.1_ASM106710v1	26230489	720_PAER
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.1533	51.6	-	FEYO01	80	2512	2141	2/9/16	3/21/17	Scaffold	SC	SAMEA2674111	GCA_900031465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/465/GCA_900031465.1_14555_5_5	-	2842STDY5881346
Helicobacter pylori	210	PRJNA360417	360417	Proteobacteria	delta/epsilon subdivisions	1.65822	38.9	-	MSYO01	53	1631	1453	2/13/17	2/22/17	Scaffold	Vanderbilt University Medical Center	SAMN06210232	GCA_001998295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/295/GCA_001998295.1_ASM199829v1	-	PZ5009-3A2
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.14636	39.7	-	CMUC01	87	2324	2042	3/22/15	3/11/17	Contig	SC	SAMEA1022785	GCA_001107505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/505/GCA_001107505.1_5737_5_1	-	205_09
Escherichia coli KTE187	1181733	PRJNA163387	163387	Proteobacteria	Gammaproteobacteria	4.96002	50.6	-	ANTD01	8	5015	4730	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974042	GCA_000350945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/945/GCA_000350945.1_Esch_coli_KTE187_V1	-	KTE187
Mycobacterium tuberculosis TKK_02_0010	1295726	PRJNA190933	190933	Terrabacteria group	Actinobacteria	4.40864	65.6	-	JMBC01	5	4287	4095	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925620	GCA_000659305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/305/GCA_000659305.1_Myco_tube_TKK_02_0010_V1	-	TKK_02_0010
Listeria monocytogenes	1639	PRJEB10787	310513	Terrabacteria group	Firmicutes	2.87252	37.9	-	CYWW02	26	2875	2803	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540887	GCA_001565535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/535/GCA_001565535.2_LM09-00558_assembly_v2	-	LM09-00558
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.6605	30.7	-	MKAG01	34	1739	1608	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532418	GCA_001764225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/225/GCA_001764225.1_ASM176422v1	-	BCW_6925
Salmonella enterica subsp. enterica serovar Hartford str. 06-0676	1212557	PRJNA170998	170998	Proteobacteria	Gammaproteobacteria	4.78584	52.1	-	ALPO01	47	4860	4590	8/27/12	5/19/17	Contig	Centers for Disease Control & Prevention	SAMN02415223	GCA_000293055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/055/GCA_000293055.1_ASM29305v1	-	06-0676
Staphylococcus aureus WMCS6011	1409376	PRJNA223696	223696	Terrabacteria group	Firmicutes	2.97145	32.8	-	JBNT01	46	3134	2956	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381437	GCA_000538135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/135/GCA_000538135.1_Stap_aure_WMCS6011_V1	-	WMCS6011
Staphylococcus aureus AMMC6054	1409378	PRJNA223698	223698	Terrabacteria group	Firmicutes	2.84484	32.8	-	JBNR01	16	2938	2805	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381439	GCA_000538155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/155/GCA_000538155.1_Stap_aure_AMMC6054_V1	-	AMMC6054
Salmonella enterica subsp. enterica serovar Hadar str. 2011K-0112	1212559	PRJNA170999	170999	Proteobacteria	Gammaproteobacteria	4.68327	52.2	-	ALPP01	54	4726	4471	8/27/12	5/19/17	Contig	Centers for Disease Control & Prevention	SAMN02415224	GCA_000293095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/095/GCA_000293095.1_ASM29309v1	-	2011K-0112
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.70086	30.6	-	MKAL01	42	1745	1598	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532211	GCA_001764335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/335/GCA_001764335.1_ASM176433v1	-	BCW_3804
Listeria monocytogenes	1639	PRJEB10788	310514	Terrabacteria group	Firmicutes	2.94785	37.8	-	CYWX01	43	2981	2907	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540888	GCA_001565555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/555/GCA_001565555.1_LM09-00701_assembly	-	LM09-00701
Mycobacterium tuberculosis TKK_02_0011	1295727	PRJNA190934	190934	Terrabacteria group	Actinobacteria	4.40712	65.5	-	JMBB01	8	4294	4097	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925621	GCA_000659325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/325/GCA_000659325.1_Myco_tube_TKK_02_0011_V1	-	TKK_02_0011
Escherichia coli KTE188	1181734	PRJNA163389	163389	Proteobacteria	Gammaproteobacteria	5.24966	50.5	-	ANTE01	10	5350	4992	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974043	GCA_000350965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/965/GCA_000350965.1_Esch_coli_KTE188_V1	-	KTE188
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.0546	39.7	-	CKKS01	61	2285	2064	3/21/15	3/11/17	Contig	SC	SAMEA1023892	GCA_001107525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/525/GCA_001107525.1_6631_7_9	-	32F
Helicobacter pylori	210	PRJNA360417	360417	Proteobacteria	delta/epsilon subdivisions	1.62931	39.1	-	MTWQ01	39	1610	1466	2/13/17	2/22/17	Scaffold	Vanderbilt University Medical Center	SAMN06250976	GCA_001998405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/405/GCA_001998405.1_ASM199840v1	-	SV355_2
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.13316	51.6	-	FFCL01	66	2455	2095	2/9/16	3/21/17	Scaffold	SC	SAMEA2674158	GCA_900031475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/475/GCA_900031475.1_14555_6_13	-	2842STDY5881450
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	7.04528	65.9	-	JUMF01	899	7134	6458	7/10/15	3/17/17	Contig	University of Washington	SAMN03198173	GCA_001067725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/725/GCA_001067725.1_ASM106772v1	26230489	953_PAER
Acinetobacter baumannii 25750_7	1310971	PRJNA195049	195049	Proteobacteria	Gammaproteobacteria	4.10475	39.1	-	JGCB01	110	4109	3855	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644671	GCA_000591755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/755/GCA_000591755.1_ASM59175v1	-	25750_7
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.06786	35.4	-	FJOT01	142	2117	1999	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888064	GCA_900073175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/175/GCA_900073175.1_9857	-	-
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.07691	41.1	-	FIFU01	26	2082	1973	2/10/16	3/19/17	Contig	SC	SAMEA1316624	GCA_900062255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/255/GCA_900062255.1_7114_5_21	-	LSS21
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.64132	50.7	-	CWWP01	404	5406	4414	7/16/15	2/24/17	Scaffold	SC	SAMEA2434359	GCA_001259955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/955/GCA_001259955.1_12830_1_32	-	KY 1163
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.20937	68.1	-	CGHB01	70	7422	6933	3/15/15	3/26/17	Scaffold	SC	SAMEA949310	GCA_001326995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/995/GCA_001326995.1_7915_5_4	-	EM2107
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.04171	47.5	-	MSGI01	102	3850	3690	3/31/17	4/6/17	Scaffold	Univ. of Maryland	SAMN06144961	GCA_002076735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/735/GCA_002076735.1_ASM207673v1	28219321	TEM/12/12-001
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.35374	28.8	-	FAIZ01	1462	3950	3764	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664318	GCA_900014025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/025/GCA_900014025.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae subsp. pneumoniae KPNIH5	1087444	PRJNA73201	73201	Proteobacteria	Gammaproteobacteria	5.7163	57.2	-	AJZX01	168	5950	5583	7/24/12	5/18/17	Contig	NIH Intramural Sequencing Center	SAMN01057607	GCA_000281275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/275/GCA_000281275.1_KPNIH5_1	22914622	KPNIH5
Vibrio parahaemolyticus	670	PRJNA357020	357020	Proteobacteria	Gammaproteobacteria	5.21744	45.3	-	MRWJ01	81	5104	4861	5/19/17	6/15/17	Contig	Guangdong Institute of Microbiology	SAMN06131432	GCA_002150315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/315/GCA_002150315.1_ASM215031v1	-	GIMxtf41-2013.07
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.96897	37.7	-	FXFQ01	156	3061	2871	4/26/17	5/6/17	Scaffold	SC	SAMEA3893582	GCA_900178935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/935/GCA_900178935.1_19789_6_135	-	VREN2831
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66027	31.4	-	FBDM01	24	1719	1628	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683152	GCA_001498335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/335/GCA_001498335.1_EC5246b	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.83198	64.2	-	CSXI01	54	4870	4712	3/24/15	3/18/17	Scaffold	SC	SAMEA1464852	GCA_001216185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/185/GCA_001216185.1_7396_8_53	-	PAP101
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16092	64.1	-	CSXJ01	28	5266	5077	3/24/15	3/18/17	Scaffold	SC	SAMEA1464896	GCA_001216225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/225/GCA_001216225.1_7396_8_55	-	PAP103
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.69693	31.3	-	FBMI01	32	1768	1678	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683380	GCA_001498355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/355/GCA_001498355.1_UNOR8693b	-	n/a
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.18266	37.4	-	FXFP01	164	3333	3084	4/26/17	5/6/17	Scaffold	SC	SAMEA3893504	GCA_900178945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/945/GCA_900178945.1_19789_6_102	-	VREN1902
Vibrio parahaemolyticus	670	PRJNA356926	356926	Proteobacteria	Gammaproteobacteria	5.21667	45.3	-	MRWI01	73	5105	4864	5/19/17	5/24/17	Contig	Guangdong Institute of Microbiology	SAMN06130233	GCA_002150335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/335/GCA_002150335.1_ASM215033v1	-	GIMxtf40-2013.07
Klebsiella pneumoniae subsp. pneumoniae KPNIH6	1087445	PRJNA73203	73203	Proteobacteria	Gammaproteobacteria	5.71494	57.2	-	AJZY01	149	5952	5609	7/24/12	5/18/17	Contig	NIH Intramural Sequencing Center	SAMN01057608	GCA_000281295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/295/GCA_000281295.1_KPNIH6_1	22914622	KPNIH6
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.28035	29.1	-	FAJC01	1274	3849	3633	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664319	GCA_900014035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/035/GCA_900014035.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.04275	47.5	-	MSGL01	110	3837	3686	3/31/17	4/6/17	Scaffold	Univ. of Maryland	SAMN06144964	GCA_002076745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/745/GCA_002076745.1_ASM207674v1	28219321	TEM/04/01-001
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.08783	68.2	-	CFVS01	59	7319	6816	3/15/15	3/27/17	Scaffold	SC	SAMEA949312	GCA_001327015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/015/GCA_001327015.1_7915_5_2	-	4009-19
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.85718	50.7	-	CXJZ01	454	5510	4705	7/16/15	2/24/17	Scaffold	SC	SAMEA1966418	GCA_001259975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/975/GCA_001259975.1_8290_4_30	-	98284
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.00224	41.5	-	FIGB01	17	1954	1837	2/10/16	3/19/17	Contig	SC	SAMEA1316602	GCA_900062265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/265/GCA_900062265.1_7114_5_27	-	LSS27
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.24931	35.5	-	FJPN01	225	2302	2137	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888160	GCA_900073185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/185/GCA_900073185.1_SA120	-	-
Acinetobacter baumannii 25750_8	1310972	PRJNA195050	195050	Proteobacteria	Gammaproteobacteria	4.0339	38.9	-	JGCA01	177	4042	3750	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644672	GCA_000591775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/775/GCA_000591775.1_ASM59177v1	-	25750_8
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.64324	66.3	-	JUKS01	406	6467	6136	7/10/15	3/17/17	Contig	University of Washington	SAMN03198212	GCA_001067795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/795/GCA_001067795.1_ASM106779v1	26230489	991.rep1_PAER
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.20875	51.6	-	FEXI01	92	2579	2194	2/9/16	3/21/17	Scaffold	SC	SAMEA2674392	GCA_900031545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/545/GCA_900031545.1_14324_5_55	-	2842STDY5881588
Helicobacter pylori	210	PRJNA360417	360417	Proteobacteria	delta/epsilon subdivisions	1.63976	38.9	-	MTWO01	56	1616	1458	2/13/17	3/29/17	Scaffold	Vanderbilt University Medical Center	SAMN06250692	GCA_001999845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/845/GCA_001999845.1_ASM199984v1	-	SV328_2
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99337	39.8	-	CQRC01	41	2216	1997	3/23/15	3/10/17	Contig	SC	SAMEA970261	GCA_001107565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/565/GCA_001107565.1_5159_7_3	-	BHN629
Escherichia coli KTE189	1181735	PRJNA163391	163391	Proteobacteria	Gammaproteobacteria	5.16617	50.6	-	ANTF01	13	5250	4918	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974044	GCA_000350985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/985/GCA_000350985.1_Esch_coli_KTE189_V1	-	KTE189
Mycobacterium tuberculosis TKK_02_0023	1295739	PRJNA190947	190947	Terrabacteria group	Actinobacteria	4.40611	65.6	-	JMBA01	1	4279	4112	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925633	GCA_000659345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/345/GCA_000659345.1_Myco_tube_TKK_02_0023_V1	-	TKK_02_0023
Listeria monocytogenes	1639	PRJEB10789	310515	Terrabacteria group	Firmicutes	2.9581	37.9	-	CYWY01	26	2998	2919	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540889	GCA_001565575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/575/GCA_001565575.1_LM09-00865_assembly	-	LM09-00865
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.68899	30.5	-	MKAM01	36	1762	1631	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532212	GCA_001764355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/355/GCA_001764355.1_ASM176435v1	-	BCW_4218
Salmonella enterica subsp. enterica serovar Mississippi str. 2010K-1406	1212561	PRJNA171000	171000	Proteobacteria	Gammaproteobacteria	4.82234	52.1	-	ALPQ01	142	5006	4555	8/27/12	5/19/17	Contig	Centers for Disease Control & Prevention	SAMN02415225	GCA_000293115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/115/GCA_000293115.1_ASM29311v1	-	2010K-1406
Staphylococcus aureus SMMC0005	1409379	PRJNA223699	223699	Terrabacteria group	Firmicutes	2.94556	32.7	-	JBNQ01	15	3132	2970	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381440	GCA_000538175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/175/GCA_000538175.1_Stap_aure_SMMC0005_V1	-	SMMC0005
Staphylococcus aureus WMCA6041	1409380	PRJNA223700	223700	Terrabacteria group	Firmicutes	2.94488	32.8	-	JBNP01	10	3128	2965	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381441	GCA_000538195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/195/GCA_000538195.1_Stap_aure_WMCA6041_V1	-	WMCA6041
Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN00322	1182164	PRJNA162785	162785	Proteobacteria	Gammaproteobacteria	4.74895	52.1	-	AMBU01	74	4873	4587	8/28/12	5/19/17	Contig	FDA	SAMN02418812	GCA_000293905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/905/GCA_000293905.1_ASM29390v1	23405335	CFSAN00322
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.85444	30.3	-	MKAN01	63	1967	1781	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532215	GCA_001764375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/375/GCA_001764375.1_ASM176437v1	-	BCW_4328
Listeria monocytogenes	1639	PRJEB10790	310516	Terrabacteria group	Firmicutes	2.99213	37.9	-	CYXA01	29	3038	2980	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540890	GCA_001565595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/595/GCA_001565595.1_LM09-00942_assembly	-	LM09-00942
Mycobacterium tuberculosis TKK_02_0024	1295740	PRJNA190948	190948	Terrabacteria group	Actinobacteria	4.39924	65.6	-	JLWD01	1	4278	4114	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925634	GCA_000659365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/365/GCA_000659365.1_Myco_tube_TKK_02_0024_V1	-	TKK_02_0024
Escherichia coli KTE191	1181737	PRJNA163395	163395	Proteobacteria	Gammaproteobacteria	5.40159	50.4	-	ANTG01	12	5571	5213	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00974046	GCA_000351005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/005/GCA_000351005.1_Esch_coli_KTE191_V1	-	KTE191
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.20877	39.5	-	CMPN01	69	2456	2209	3/22/15	3/11/17	Contig	SC	SAMEA2061504	GCA_001107605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/605/GCA_001107605.1_9803_7_57	-	23F
Helicobacter pylori	210	PRJNA360417	360417	Proteobacteria	delta/epsilon subdivisions	1.6184	39.1	-	MTWL01	40	1594	1433	2/13/17	3/29/17	Scaffold	Vanderbilt University Medical Center	SAMN06246878	GCA_001999865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/865/GCA_001999865.1_ASM199986v1	-	PZ5016_3A3
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16366	51.5	-	FEPF01	77	2515	2146	2/9/16	3/21/17	Scaffold	SC	SAMEA2673768	GCA_900032015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/015/GCA_900032015.1_14355_4_1	-	2842STDY5880958
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.72843	66.3	-	JUOD01	466	6497	6181	7/10/15	3/17/17	Contig	University of Washington	SAMN03198123	GCA_001067875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/875/GCA_001067875.1_ASM106787v1	26230489	913_PAER
Acinetobacter baumannii 24975_5	1310949	PRJNA195026	195026	Proteobacteria	Gammaproteobacteria	4.33111	39	-	JGAG01	447	4340	3974	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614551	GCA_000591795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/795/GCA_000591795.1_ASM59179v1	-	24975_5
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.13557	35.4	-	FJOK01	112	2180	2052	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888113	GCA_900073195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/195/GCA_900073195.1_SA67	-	-
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.26058	41.2	-	FIIN01	38	2235	2112	2/10/16	3/19/17	Contig	SC	SAMEA1316583	GCA_900062275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/275/GCA_900062275.1_7114_5_90	-	LSS90
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.78579	50.6	-	CWWX01	478	5577	4512	7/17/15	2/24/17	Scaffold	SC	SAMEA2434366	GCA_001260015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/015/GCA_001260015.1_12830_1_39	-	KY 3460
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.14591	68.2	-	CGEZ01	62	7403	6890	3/15/15	3/26/17	Scaffold	SC	SAMEA949313	GCA_001327035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/035/GCA_001327035.1_7915_5_7	-	DB30729/00
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.04563	47.5	-	MSGM01	98	3850	3694	3/31/17	4/6/17	Scaffold	Univ. of Maryland	SAMN06144965	GCA_002076775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/775/GCA_002076775.1_ASM207677v1	28219321	21B
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.26	29.1	-	FAJL01	1463	3836	3629	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664325	GCA_900014055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/055/GCA_900014055.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae subsp. pneumoniae KPNIH9	1094169	PRJNA73841	73841	Proteobacteria	Gammaproteobacteria	5.72033	57.2	-	AKAB01	115	5949	5611	7/24/12	5/18/17	Contig	NISC	SAMN01057613	GCA_000281315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/315/GCA_000281315.1_KPNIH9_1	22914622	KPNIH9
Vibrio parahaemolyticus	670	PRJNA358262	358262	Proteobacteria	Gammaproteobacteria	5.26401	45.3	-	MUXG01	103	5213	4965	5/19/17	5/24/17	Contig	Guangdong Institute of Microbiology	SAMN06169655	GCA_002150465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/465/GCA_002150465.1_ASM215046v1	-	GIMxtfL83-2011.05
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.19419	37.4	-	FXFV01	167	3336	3098	4/26/17	5/6/17	Scaffold	SC	SAMEA3893500	GCA_900178955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/955/GCA_900178955.1_19789_6_100	-	VREN1900
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.60488	31.7	-	FBNK01	32	1602	1539	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683424	GCA_001498375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/375/GCA_001498375.1_H061980521b	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15927	64.1	-	CSZD01	22	5266	4938	3/24/15	3/18/17	Scaffold	SC	SAMEA1317714	GCA_001216245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/245/GCA_001216245.1_7520_7_28	-	PAP148
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.90041	64.1	-	CSYV01	21	4885	4730	3/24/15	3/18/17	Scaffold	SC	SAMEA1464839	GCA_001216265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/265/GCA_001216265.1_7396_8_94	-	PAP142
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.73128	31.2	-	FBFR01	31	1785	1690	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683209	GCA_001498395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/395/GCA_001498395.1_SS_2289	-	n/a
Enterococcus faecium	1352	PRJEB13192	330639	Terrabacteria group	Firmicutes	3.07723	37.7	-	FXFI01	163	3199	2922	4/26/17	5/6/17	Scaffold	SC	SAMEA3916588	GCA_900178965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/965/GCA_900178965.1_19647_8_23	-	VREN1595
Vibrio parahaemolyticus	670	PRJNA357157	357157	Proteobacteria	Gammaproteobacteria	5.46329	45.3	-	MSAL01	220	5323	5028	5/22/17	5/24/17	Contig	Guangdong Institute of Microbiology	SAMN06134384	GCA_002153875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/875/GCA_002153875.1_ASM215387v1	-	Vp133
Klebsiella pneumoniae subsp. pneumoniae KPNIH12	1128946	PRJNA80219	80219	Proteobacteria	Gammaproteobacteria	5.71936	57.2	-	AKAE01	164	5957	5549	7/24/12	5/18/17	Contig	NISC	SAMN01057621	GCA_000281335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/335/GCA_000281335.1_KPNIH12_1	22914622	KPNIH12
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.05513	28.6	-	FAJK01	971	3732	3583	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664329	GCA_900014065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/065/GCA_900014065.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.04681	47.5	-	MSGN01	95	3844	3698	3/31/17	4/6/17	Scaffold	Univ. of Maryland	SAMN06144966	GCA_002076785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/785/GCA_002076785.1_ASM207678v1	28219321	20478
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.04594	68.2	-	CGFK01	63	7263	6765	3/15/15	3/26/17	Scaffold	SC	SAMEA949316	GCA_001327055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/055/GCA_001327055.1_7915_5_26	-	77/96
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.56125	50.8	-	CWXT01	382	5029	4369	7/16/15	2/24/17	Scaffold	SC	SAMEA2445700	GCA_001260035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/035/GCA_001260035.1_12971_8_20	-	H085220501
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.01966	41.2	-	FIIW01	24	2022	1922	2/10/16	3/19/17	Contig	SC	SAMEA1316558	GCA_900062285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/285/GCA_900062285.1_7054_7_1	-	LSS97
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.09084	35.4	-	FJOR01	150	2136	2006	9/30/16	3/21/17	Contig	INSTITUT PASTEUR	SAMEA3888140	GCA_900073205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/205/GCA_900073205.1_SA100	-	-
Acinetobacter baumannii 44327_7	1310991	PRJNA195069	195069	Proteobacteria	Gammaproteobacteria	4.00304	38.9	-	JGBV01	164	3996	3689	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644677	GCA_000591815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/815/GCA_000591815.1_ASM59181v1	-	44327_7
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.62406	66.2	-	JUNG01	890	6655	5992	7/10/15	3/17/17	Contig	University of Washington	SAMN03198146	GCA_001067935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/935/GCA_001067935.1_ASM106793v1	26230489	928_PAER
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.13357	51.7	-	FERM01	75	2495	2180	2/9/16	3/19/17	Scaffold	SC	SAMEA2673943	GCA_900032025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/025/GCA_900032025.1_14355_4_55	-	2842STDY5881012
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.6389	39	-	MUOG01	170	1637	1466	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187421	GCA_002012395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/395/GCA_002012395.1_ASM201239v1	28293542	CA22312
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.04388	39.6	-	CLDR01	69	2224	1973	3/21/15	3/11/17	Contig	SC	SAMEA1026221	GCA_001107645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/645/GCA_001107645.1_6899_5_21	-	SMRU2061
Escherichia coli KTE193	1181739	PRJNA163399	163399	Proteobacteria	Gammaproteobacteria	5.50767	50.4	-	ANTH01	9	5640	5240	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974048	GCA_000351025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/025/GCA_000351025.1_Esch_coli_KTE193_V1	-	KTE193
Mycobacterium tuberculosis TKK_02_0026	1295742	PRJNA190950	190950	Terrabacteria group	Actinobacteria	4.40075	65.6	-	JMAZ01	1	4282	4114	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925636	GCA_000659385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/385/GCA_000659385.1_Myco_tube_TKK_02_0026_V1	-	TKK_02_0026
Listeria monocytogenes	1639	PRJEB10791	310517	Terrabacteria group	Firmicutes	3.04861	37.9	-	CYWZ01	34	3105	3038	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540891	GCA_001565615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/615/GCA_001565615.1_LM09-01004_assembly	-	LM09-01004
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.82926	30.3	-	MKAP01	55	1909	1723	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532407	GCA_001764405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/405/GCA_001764405.1_ASM176440v1	-	BCW_6907
Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN00328	1182170	PRJNA162797	162797	Proteobacteria	Gammaproteobacteria	4.75397	52.1	-	AMBX01	59	4859	4626	8/28/12	5/19/17	Contig	FDA	SAMN02415286	GCA_000293925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/925/GCA_000293925.1_ASM29392v1	23405335	CFSAN00328
Staphylococcus aureus WAMC6010	1409381	PRJNA223701	223701	Terrabacteria group	Firmicutes	2.98551	32.7	-	JBNO01	18	3179	3006	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381442	GCA_000538215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/215/GCA_000538215.1_Stap_aure_WAMC6010_V1	-	WAMC6010
Staphylococcus aureus HBHO6042	1409382	PRJNA223702	223702	Terrabacteria group	Firmicutes	2.87188	32.8	-	JBNN01	22	2992	2821	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381443	GCA_000538235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/235/GCA_000538235.1_Stap_aure_HBHO6042_V1	-	HBHO6042
Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN00325	1182167	PRJNA162791	162791	Proteobacteria	Gammaproteobacteria	4.75095	52.1	-	AMBV01	55	4854	4616	8/28/12	5/19/17	Contig	FDA	SAMN02415284	GCA_000293945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/945/GCA_000293945.1_ASM29394v1	23405335	CFSAN00325
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.65921	30.6	-	MKAR01	36	1737	1615	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532419	GCA_001764455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/455/GCA_001764455.1_ASM176445v1	-	BCW_6926
Listeria monocytogenes	1639	PRJEB10792	310518	Terrabacteria group	Firmicutes	2.86572	37.9	-	CYXC01	34	2883	2813	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540892	GCA_001565635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/635/GCA_001565635.1_LM09-01092_assembly	-	LM09-01092
Mycobacterium tuberculosis TKK_02_0028	1295744	PRJNA190952	190952	Terrabacteria group	Actinobacteria	4.40331	65.6	-	JMAY01	1	4283	4117	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925638	GCA_000659405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/405/GCA_000659405.1_Myco_tube_TKK_02_0028_V1	-	TKK_02_0028
Escherichia coli KTE201	1181747	PRJNA163415	163415	Proteobacteria	Gammaproteobacteria	5.28166	50.5	-	ANTI01	13	5411	5043	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974056	GCA_000351045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/045/GCA_000351045.1_Esch_coli_KTE201_V1	-	KTE201
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.05942	39.7	-	CMKN01	61	2247	2045	3/22/15	3/10/17	Contig	SC	SAMEA1029413	GCA_001107765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/765/GCA_001107765.1_7054_4_24	-	SMRU3048
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.65747	39	-	MUOC01	160	1658	1471	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187417	GCA_002012405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/405/GCA_002012405.1_ASM201240v1	28293542	CA22019
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.19794	51.6	-	FERN01	100	2564	2197	2/9/16	3/21/17	Scaffold	SC	SAMEA2673947	GCA_900032035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/035/GCA_900032035.1_14355_4_56	-	2842STDY5881013
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.91407	66	-	JUMA01	277	6669	6421	7/10/15	3/17/17	Contig	University of Washington	SAMN03198178	GCA_001067965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/965/GCA_001067965.1_ASM106796v1	26230489	958_PAER
Acinetobacter baumannii 44327_1	1310985	PRJNA195063	195063	Proteobacteria	Gammaproteobacteria	4.01153	38.9	-	JGBZ01	164	4013	3710	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644673	GCA_000591835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/835/GCA_000591835.1_ASM59183v1	-	44327_1
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.19226	35.5	-	FJOM01	143	2236	2109	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888155	GCA_900073215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/215/GCA_900073215.1_SA115	-	-
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.14373	40.9	-	FIKN01	27	2140	1985	2/10/16	3/19/17	Contig	SC	SAMEA1316599	GCA_900062295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/295/GCA_900062295.1_7054_7_44	-	SS1048
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.75992	50.7	-	CWVS01	386	5320	4573	7/16/15	2/24/17	Scaffold	SC	SAMEA3345087	GCA_001260095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/095/GCA_001260095.1_Sg_201401743_CGTACG_L001	-	201401743_1
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.15783	68.2	-	CFVV01	90	7473	6941	3/15/15	3/26/17	Scaffold	SC	SAMEA949318	GCA_001327075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/075/GCA_001327075.1_7915_5_13	-	497/96
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.02059	47.5	-	MRVM01	57	3793	3664	4/3/17	4/5/17	Scaffold	Univ. of Maryland	SAMN06126943	GCA_002078055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/055/GCA_002078055.1_ASM207805v1	28219321	36KI
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.21242	28.5	-	FAJG01	438	3902	3771	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664327	GCA_900014075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/075/GCA_900014075.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae subsp. pneumoniae KPNIH17	1128951	PRJNA80229	80229	Proteobacteria	Gammaproteobacteria	5.71579	57.2	-	AKAH01	137	5964	5603	7/24/12	5/18/17	Contig	NISC	SAMN01057646	GCA_000281355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/355/GCA_000281355.1_KPNIH17_1	22914622	KPNIH17
Vibrio parahaemolyticus	670	PRJNA357125	357125	Proteobacteria	Gammaproteobacteria	5.41538	45.3	-	MSAR01	198	5183	4870	5/22/17	5/24/17	Contig	Guangdong Institute of Microbiology	SAMN06133346	GCA_002153925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/925/GCA_002153925.1_ASM215392v1	-	Vp47
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.98212	37.7	-	FXEQ01	172	3110	2881	4/26/17	5/6/17	Scaffold	SC	SAMEA3893566	GCA_900178975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/975/GCA_900178975.1_19789_6_127	-	VREN2772
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.72168	31.3	-	FBGQ01	39	1760	1640	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683239	GCA_001498415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/415/GCA_001498415.1_SWAN249	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23287	64	-	CSWK01	36	5284	5095	3/24/15	3/18/17	Scaffold	SC	SAMEA1464898	GCA_001216305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/305/GCA_001216305.1_7396_7_35	-	PAP083
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15893	64.1	-	CSXN01	20	5262	5082	3/24/15	3/18/17	Scaffold	SC	SAMEA1464963	GCA_001216365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/365/GCA_001216365.1_7396_8_60	-	PAP108
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.82698	31	-	FBMC01	74	1908	1783	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683381	GCA_001498435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/435/GCA_001498435.1_UNOR7592c	-	n/a
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.98354	37.7	-	FXGF01	158	3089	2883	4/26/17	5/6/17	Scaffold	SC	SAMEA3893577	GCA_900178985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/985/GCA_900178985.1_19789_6_133	-	VREN2829
Vibrio parahaemolyticus	670	PRJNA357686	357686	Proteobacteria	Gammaproteobacteria	5.24967	45.3	-	MSAO01	169	5089	4836	5/22/17	5/24/17	Contig	Guangdong Institute of Microbiology	SAMN06158907	GCA_002153975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/975/GCA_002153975.1_ASM215397v1	-	Vp296
Klebsiella pneumoniae subsp. pneumoniae KPNIH20	1128954	PRJNA80235	80235	Proteobacteria	Gammaproteobacteria	5.72445	57.2	-	AKAK01	155	5969	5520	7/24/12	5/18/17	Contig	NISC	SAMN01057650	GCA_000281375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/375/GCA_000281375.1_KPNIH20_1	22914622	KPNIH20
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.24401	28.9	-	FAJM01	1176	3856	3652	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664330	GCA_900014085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/085/GCA_900014085.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.04851	47.5	-	MSIY01	98	3846	3702	4/4/17	4/10/17	Scaffold	Univ. of Maryland	SAMN06144971	GCA_002078595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/595/GCA_002078595.1_ASM207859v1	28219321	43Ki
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.14234	68.2	-	CFKW01	72	7357	6830	3/15/15	3/27/17	Scaffold	SC	SAMEA949323	GCA_001327095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/095/GCA_001327095.1_7915_5_10	-	EM10266/01
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.67063	50.8	-	CXIG01	378	5241	4485	7/16/15	2/24/17	Scaffold	SC	SAMEA2003381	GCA_001260115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/115/GCA_001260115.1_8289_7_66	-	83361
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.08194	41.1	-	FITJ01	26	2087	1967	2/10/16	3/19/17	Contig	SC	SAMEA1566044	GCA_900062305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/305/GCA_900062305.1_8525_5_18	-	FX543_1
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.22652	35.5	-	FJPR01	236	2259	2112	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888173	GCA_900073225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/225/GCA_900073225.1_SA209	-	-
Acinetobacter baumannii 44327_4	1310988	PRJNA195066	195066	Proteobacteria	Gammaproteobacteria	4.10241	39	-	JGBX01	175	4141	3825	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644675	GCA_000591855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/855/GCA_000591855.1_ASM59185v1	-	44327_4
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.64771	66.3	-	JUOL01	285	6410	6175	7/10/15	3/17/17	Contig	University of Washington	SAMN03198115	GCA_001068115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/115/GCA_001068115.1_ASM106811v1	26230489	908_PAER
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16215	51.5	-	FEXE01	85	2517	2156	2/9/16	3/21/17	Scaffold	SC	SAMEA2674376	GCA_900032045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/045/GCA_900032045.1_14324_5_39	-	2842STDY5881572
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.59205	39.1	-	MUOD01	206	1612	1426	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187418	GCA_002012415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/415/GCA_002012415.1_ASM201241v1	28293542	CA22020
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09774	39.5	-	CNQK02	173	2259	2062	3/23/15	3/5/17	Contig	SC	SAMEA1032595	GCA_001107785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/785/GCA_001107785.2_6952_7_19	-	R34-3179
Escherichia coli KTE204	1181750	PRJNA163421	163421	Proteobacteria	Gammaproteobacteria	5.25526	50.7	-	ANTJ01	10	5405	5103	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974059	GCA_000351065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/065/GCA_000351065.1_Esch_coli_KTE204_V1	-	KTE204
Mycobacterium tuberculosis TKK_02_0029	1295745	PRJNA190953	190953	Terrabacteria group	Actinobacteria	4.40148	65.6	-	JMAX01	1	4279	4115	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925639	GCA_000659425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/425/GCA_000659425.1_Myco_tube_TKK_02_0029_V1	-	TKK_02_0029
Listeria monocytogenes	1639	PRJEB10793	310519	Terrabacteria group	Firmicutes	2.88619	37.9	-	CYXB01	21	2927	2865	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540893	GCA_001565655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/655/GCA_001565655.1_LM09-01099_assembly	-	LM09-01099
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.65404	30.6	-	MKAS01	31	1732	1607	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532420	GCA_001764475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/475/GCA_001764475.1_ASM176447v1	-	BCW_6927
Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN00326	1182168	PRJNA162793	162793	Proteobacteria	Gammaproteobacteria	4.75291	52.1	-	AMBW01	46	4866	4611	8/28/12	5/19/17	Contig	FDA	SAMN02415285	GCA_000293965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/965/GCA_000293965.1_ASM29396v1	23405335	CFSAN00326
Staphylococcus aureus SJUD6063	1409383	PRJNA223703	223703	Terrabacteria group	Firmicutes	2.89604	32.7	-	JBNM01	9	3048	2886	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381444	GCA_000538255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/255/GCA_000538255.1_Stap_aure_SJUD6063_V1	-	SJUD6063
Staphylococcus aureus SJUD6053	1409385	PRJNA223705	223705	Terrabacteria group	Firmicutes	2.9707	32.8	-	JBNK01	22	3142	2970	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381446	GCA_000538275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/275/GCA_000538275.1_Stap_aure_SJUD6053_V1	-	SJUD6053
Salmonella enterica subsp. salamae str. 3588/07	1078775	PRJEA72469	72469	Proteobacteria	Gammaproteobacteria	5.11624	51.8	-	CAFD01	138	5183	4768	9/3/12	5/19/17	Contig	Wellcome Trust Sanger Insititute	SAMEA2271999	GCA_000308035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/035/GCA_000308035.1_ASM30803v1	-	3588/07
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.62383	30.5	-	MKAT01	45	1698	1596	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532421	GCA_001764485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/485/GCA_001764485.1_ASM176448v1	-	BCW_6928
Listeria monocytogenes	1639	PRJEB10794	310520	Terrabacteria group	Firmicutes	2.90288	37.9	-	CYUN01	32	2909	2829	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540894	GCA_001565675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/675/GCA_001565675.1_LM10-00505_assembly	-	LM10-00505
Mycobacterium tuberculosis TKK_02_0030	1295746	PRJNA190954	190954	Terrabacteria group	Actinobacteria	4.40583	65.6	-	JMAW01	1	4278	4114	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925640	GCA_000659445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/445/GCA_000659445.1_Myco_tube_TKK_02_0030_V1	-	TKK_02_0030
Escherichia coli KTE205	1181751	PRJNA163423	163423	Proteobacteria	Gammaproteobacteria	5.368	50.7	-	ANTK01	9	5536	5156	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00974060	GCA_000351085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/085/GCA_000351085.1_Esch_coli_KTE205_V1	-	KTE205
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.03878	39.6	-	CRVG01	43	2240	2002	3/22/15	3/11/17	Contig	SC	SAMEA1025930	GCA_001107825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/825/GCA_001107825.1_6805_7_1	-	SMRU1729
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.70889	39.1	-	MUOE01	269	1758	1536	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187419	GCA_002012425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/425/GCA_002012425.1_ASM201242v1	28293542	CA22095
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.17575	51.5	-	FEYK01	101	2522	2166	2/9/16	3/21/17	Scaffold	SC	SAMEA2674103	GCA_900032055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/055/GCA_900032055.1_14555_5_1	-	2842STDY5881342
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.65456	66.2	-	JUNH01	474	6503	6119	7/10/15	3/17/17	Contig	University of Washington	SAMN03198145	GCA_001068165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/165/GCA_001068165.1_ASM106816v1	26230489	927_PAER
Acinetobacter baumannii 44327_5	1310989	PRJNA195067	195067	Proteobacteria	Gammaproteobacteria	4.06388	39	-	JGBW01	162	4077	3771	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644676	GCA_000591875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/875/GCA_000591875.1_ASM59187v1	-	44327_5
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.14254	35.5	-	FJOV01	140	2175	2056	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888163	GCA_900073235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/235/GCA_900073235.1_SA154	-	-
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.02344	41.3	-	FIIZ01	25	2021	1931	2/10/16	3/19/17	Contig	SC	SAMEA1316586	GCA_900062845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/845/GCA_900062845.1_7054_7_17	-	SS1004
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.64991	50.5	-	CXDR01	379	4957	4450	7/16/15	2/24/17	Scaffold	SC	SAMEA954809	GCA_001260135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/135/GCA_001260135.1_5236_8_3	-	Sh9810267_441091
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.05413	68.2	-	CFVZ01	69	7273	6788	3/15/15	3/26/17	Scaffold	SC	SAMEA949326	GCA_001327115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/115/GCA_001327115.1_7915_5_17	-	17/96
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.02433	47.5	-	MSIV01	93	3817	3677	4/4/17	4/5/17	Scaffold	Univ. of Maryland	SAMN06144968	GCA_002078635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/635/GCA_002078635.1_ASM207863v1	28219321	39361
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.17368	28.6	-	FAJN01	403	3805	3660	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664333	GCA_900014095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/095/GCA_900014095.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae subsp. pneumoniae KPNIH4	1087443	PRJNA73199	73199	Proteobacteria	Gammaproteobacteria	5.71806	57.2	-	AJZW01	173	5959	5595	7/24/12	5/18/17	Contig	NIH Intramural Sequencing Center	SAMN01057606	GCA_000281395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/395/GCA_000281395.1_KPNIH4_1	22914622	KPNIH4
Vibrio parahaemolyticus	670	PRJNA357868	357868	Proteobacteria	Gammaproteobacteria	5.13618	45.3	-	MSAP01	121	5000	4784	5/22/17	5/24/17	Contig	Guangdong Institute of Microbiology	SAMN06161405	GCA_002154055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/055/GCA_002154055.1_ASM215405v1	-	Vp336
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.09225	37.6	-	FXGC01	185	3233	2962	4/26/17	5/6/17	Scaffold	SC	SAMEA3893620	GCA_900178995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/178/995/GCA_900178995.1_19789_6_155	-	VREN3205
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65766	31.4	-	FBJT01	20	1714	1625	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683319	GCA_001498455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/455/GCA_001498455.1_CCN124	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15476	64.1	-	CSXR01	21	5274	5072	3/24/15	3/18/17	Scaffold	SC	SAMEA1464950	GCA_001216405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/405/GCA_001216405.1_7396_8_63	-	PAP111
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16838	64.1	-	CSXM01	26	5280	5072	3/24/15	3/18/17	Scaffold	SC	SAMEA1464909	GCA_001216625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/625/GCA_001216625.1_7396_8_56	-	PAP104
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.60481	31.7	-	FBLJ01	18	1608	1539	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683361	GCA_001498475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/475/GCA_001498475.1_H081840386	-	n/a
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.19145	37.4	-	FXFS01	167	3342	3096	4/26/17	5/6/17	Scaffold	SC	SAMEA3893523	GCA_900179015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/015/GCA_900179015.1_19789_6_110	-	VREN2173
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.09171	45.3	-	LHRA01	70	4914	4687	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN03945131	GCA_002198055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/055/GCA_002198055.1_ASM219805v1	-	CFSAN001604
Klebsiella pneumoniae subsp. pneumoniae KPNIH7	1094167	PRJNA73837	73837	Proteobacteria	Gammaproteobacteria	5.72385	57.2	-	AJZZ01	160	5968	5589	7/24/12	5/18/17	Contig	NISC	SAMN01057711	GCA_000281415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/415/GCA_000281415.1_KPNIH7_1	22914622	KPNIH7
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.14719	28.7	-	FAJO01	782	3788	3620	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664334	GCA_900014105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/105/GCA_900014105.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.04132	47.5	-	MSIX01	99	3854	3691	4/4/17	4/5/17	Scaffold	Univ. of Maryland	SAMN06144970	GCA_002078755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/755/GCA_002078755.1_ASM207875v1	28219321	TEM/29/01-003
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.15253	68.2	-	CIAS01	54	7342	6854	4/21/15	3/26/17	Scaffold	SC	SAMEA949329	GCA_001327135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/135/GCA_001327135.1_6998_1_22	-	EY7
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.70948	50.7	-	CXMX01	387	5329	4531	7/16/15	2/24/17	Scaffold	SC	SAMEA2057992	GCA_001260155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/155/GCA_001260155.1_9870_6_33	-	143781
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.03813	41.2	-	FISF01	26	2032	1929	2/10/16	3/19/17	Contig	SC	SAMEA1566100	GCA_900063015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/015/GCA_900063015.1_8525_5_95	-	CTU02SS-DN025
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.14269	35.5	-	FJOS01	142	2175	2056	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888206	GCA_900073245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/245/GCA_900073245.1_SA324	-	-
Acinetobacter baumannii 44857_10	1311004	PRJNA195082	195082	Proteobacteria	Gammaproteobacteria	4.05582	39.2	-	JGBJ01	120	4018	3761	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644691	GCA_000591895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/895/GCA_000591895.1_ASM59189v1	-	44857_10
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.91825	66	-	JUMB01	390	6753	6400	7/10/15	3/17/17	Contig	University of Washington	SAMN03198177	GCA_001068295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/295/GCA_001068295.1_ASM106829v1	26230489	957_PAER
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15773	51.5	-	FEYY01	80	2524	2164	2/9/16	3/21/17	Scaffold	SC	SAMEA2674137	GCA_900032065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/065/GCA_900032065.1_14555_5_14	-	2842STDY5881355
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.66183	39.1	-	MUOH01	95	1644	1477	3/3/17	3/6/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187422	GCA_002012475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/475/GCA_002012475.1_ASM201247v1	28293542	CA22327
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04552	39.7	-	CNYR02	141	2213	2023	3/22/15	3/11/17	Contig	SC	SAMEA1463223	GCA_001107865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/865/GCA_001107865.2_7553_4_34	-	NP7020
Escherichia coli KTE206	1181752	PRJNA163425	163425	Proteobacteria	Gammaproteobacteria	5.07934	50.4	-	ANTL01	8	5147	4817	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974061	GCA_000351105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/105/GCA_000351105.1_Esch_coli_KTE206_V1	-	KTE206
Mycobacterium tuberculosis TKK_02_0031	1295747	PRJNA190955	190955	Terrabacteria group	Actinobacteria	4.40463	65.6	-	JMAV01	1	4279	4115	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925641	GCA_000659465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/465/GCA_000659465.1_Myco_tube_TKK_02_0031_V1	-	TKK_02_0031
Listeria monocytogenes	1639	PRJEB10795	310521	Terrabacteria group	Firmicutes	2.95446	37.8	-	CYUQ01	40	2988	2899	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540895	GCA_001565695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/695/GCA_001565695.1_LM13656_assembly	-	LM13656
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.78474	30.3	-	MKAU01	46	1842	1684	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532422	GCA_001764495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/495/GCA_001764495.1_ASM176449v1	-	BCW_6929
Salmonella enterica subsp. enterica serovar Typhimurium str. STm6	1218147	PRJNA171797	171797	Proteobacteria	Gammaproteobacteria	4.93797	52.2	-	AMED02	83	5083	4827	11/13/12	2/26/17	Contig	University of Melbourne	SAMN02225277	GCA_000312745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/745/GCA_000312745.2_STm6.2	23792739	STm6
Staphylococcus aureus MISS6017	1409388	PRJNA223708	223708	Terrabacteria group	Firmicutes	2.94628	32.8	-	JBNH01	13	3132	2963	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381449	GCA_000538295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/295/GCA_000538295.1_Stap_aure_MISS6017_V1	-	MISS6017
Staphylococcus aureus MISS6019	1409389	PRJNA223709	223709	Terrabacteria group	Firmicutes	2.89491	32.9	-	JBNG01	8	3031	2873	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381450	GCA_000538315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/315/GCA_000538315.1_Stap_aure_MISS6019_V1	-	MISS6019
Salmonella enterica subsp. enterica serovar Typhimurium str. STm11	1218151	PRJNA171801	171801	Proteobacteria	Gammaproteobacteria	4.94367	52.2	-	AMEF02	110	5079	4830	11/13/12	2/26/17	Contig	University of Melbourne	SAMN02225281	GCA_000312765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/765/GCA_000312765.2_STm11.2	23792739	STm11
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.64359	30.5	-	MKAV01	34	1725	1618	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532423	GCA_001764535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/535/GCA_001764535.1_ASM176453v1	-	BCW_6930
Listeria monocytogenes	1639	PRJEB10796	310522	Terrabacteria group	Firmicutes	2.94078	37.8	-	CYUW01	31	2985	2929	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540896	GCA_001565715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/715/GCA_001565715.1_LM57179_assembly	-	LM57179
Mycobacterium tuberculosis TKK_02_0035	1295751	PRJNA190959	190959	Terrabacteria group	Actinobacteria	4.40284	65.6	-	JMAU01	2	4266	4113	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925645	GCA_000659485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/485/GCA_000659485.1_Myco_tube_TKK_02_0035_V1	-	TKK_02_0035
Escherichia coli KTE208	1181754	PRJNA163429	163429	Proteobacteria	Gammaproteobacteria	5.35512	50.6	-	ANTM01	12	5564	5245	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974063	GCA_000351125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/125/GCA_000351125.1_Esch_coli_KTE208_V1	-	KTE208
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	1.96519	39.7	-	CMEY01	53	2155	1951	3/21/15	3/10/17	Contig	SC	SAMEA1028618	GCA_001107985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/985/GCA_001107985.1_7011_5_8	-	SMRU2792
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.7153	39	-	MUOJ01	100	1721	1539	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187424	GCA_002012495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/495/GCA_002012495.1_ASM201249v1	28293542	CA22337
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11973	51.7	-	FFAN01	94	2493	2166	2/9/16	3/19/17	Scaffold	SC	SAMEA2674254	GCA_900032075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/075/GCA_900032075.1_14555_5_57	-	2842STDY5881398
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.64764	66.3	-	JUKR01	251	6403	6182	7/10/15	3/17/17	Contig	University of Washington	SAMN03198213	GCA_001068375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/375/GCA_001068375.1_ASM106837v1	26230489	991.rep2_PAER
Acinetobacter baumannii 44857_9	1311003	PRJNA195081	195081	Proteobacteria	Gammaproteobacteria	4.03085	39.4	-	JGBI01	277	3962	3716	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644692	GCA_000591915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/915/GCA_000591915.1_ASM59191v1	-	44857_9
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.247	35.6	-	FJPF01	231	2298	2133	9/30/16	3/21/17	Contig	INSTITUT PASTEUR	SAMEA3888086	GCA_900073265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/265/GCA_900073265.1_SA35	-	-
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.05248	41.1	-	FIKP01	108	2116	1939	2/10/16	3/19/17	Contig	SC	SAMEA1316542	GCA_900063275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/275/GCA_900063275.1_7054_7_48	-	SS1053
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.59514	50.7	-	CXGH01	368	4998	4417	7/16/15	2/24/17	Scaffold	SC	SAMEA1013718	GCA_001260195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/195/GCA_001260195.1_6551_1_5	-	SS127358_2798527
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.18217	68.2	-	CFWJ01	95	7485	6975	3/15/15	3/26/17	Scaffold	SC	SAMEA949340	GCA_001327155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/155/GCA_001327155.1_7915_5_19	-	35/96
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.04574	47.5	-	MSIW01	95	3838	3695	4/4/17	4/5/17	Scaffold	Univ. of Maryland	SAMN06144969	GCA_002078815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/815/GCA_002078815.1_ASM207881v1	28219321	20390
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.22061	28.8	-	FAJR01	1304	3875	3683	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664337	GCA_900014115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/115/GCA_900014115.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae subsp. pneumoniae KPNIH14	1128948	PRJNA80223	80223	Proteobacteria	Gammaproteobacteria	5.72335	57.2	-	AKAF01	165	5969	5475	7/24/12	5/18/17	Contig	NISC	SAMN01057640	GCA_000281455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/455/GCA_000281455.1_KPNIH14_1	22914622	KPNIH14
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.093	45.3	-	LHRB01	56	4916	4693	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN03945132	GCA_002198075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/075/GCA_002198075.1_ASM219807v1	-	CFSAN001603
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.18133	37.4	-	FXGD01	161	3323	3085	4/26/17	5/6/17	Scaffold	SC	SAMEA3893506	GCA_900179025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/025/GCA_900179025.1_19789_6_103	-	VREN1903
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75396	31.2	-	FBBT01	37	1838	1750	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683105	GCA_001498495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/495/GCA_001498495.1_EC6203	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15074	64.1	-	CSXO01	29	5260	5062	3/24/15	3/18/17	Scaffold	SC	SAMEA1464937	GCA_001216665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/665/GCA_001216665.1_7396_8_59	-	PAP107
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16896	64.1	-	CSXZ01	33	5275	5073	3/24/15	3/18/17	Scaffold	SC	SAMEA1464844	GCA_001216725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/725/GCA_001216725.1_7396_8_70	-	PAP118
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.59598	31.7	-	FBOH01	23	1627	1565	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683432	GCA_001498515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/515/GCA_001498515.1_H113760461	-	n/a
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.19253	37.4	-	FXGB01	164	3335	3090	4/26/17	5/6/17	Scaffold	SC	SAMEA3893875	GCA_900179045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/045/GCA_900179045.1_19789_5_39	-	VREN1840
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.09021	45.3	-	LHRE01	65	4900	4689	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN03945135	GCA_002198135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/135/GCA_002198135.1_ASM219813v1	-	CFSAN001606
Klebsiella pneumoniae subsp. pneumoniae KPNIH18	1128952	PRJNA80231	80231	Proteobacteria	Gammaproteobacteria	5.76947	57.2	-	AKAI01	167	6023	5618	7/24/12	5/18/17	Contig	NISC	SAMN01057635	GCA_000281475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/475/GCA_000281475.1_KPNIH18_1	"2,291,462,227,353,750"	KPNIH18
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.11049	28.5	-	CZXQ01	423	3824	3675	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664027	GCA_900014135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/135/GCA_900014135.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA356770	356770	Proteobacteria	Gammaproteobacteria	4.04551	47.5	-	MSJC01	99	3836	3701	4/4/17	4/5/17	Scaffold	Univ. of Maryland	SAMN06144975	GCA_002078825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/078/825/GCA_002078825.1_ASM207882v1	28219321	17609
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.11979	68.2	-	CFVQ01	74	7343	6832	3/15/15	3/26/17	Scaffold	SC	SAMEA949344	GCA_001327175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/175/GCA_001327175.1_7915_5_21	-	D10 7310-3154
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.78341	50.7	-	CWXC01	433	5508	4606	7/16/15	2/24/17	Scaffold	SC	SAMEA2434384	GCA_001260215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/215/GCA_001260215.1_12844_1_57	-	11111889
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.10188	41.1	-	FIOG01	24	2115	1986	2/10/16	3/19/17	Contig	SC	SAMEA1566030	GCA_900063285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/285/GCA_900063285.1_8337_6_55	-	EN044
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.14118	35.5	-	FJOW01	141	2179	2058	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888207	GCA_900073275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/275/GCA_900073275.1_SA325	-	-
Acinetobacter baumannii 44327_6	1310990	PRJNA195068	195068	Proteobacteria	Gammaproteobacteria	4.18248	39	-	JGBH01	299	4207	3849	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644690	GCA_000591935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/935/GCA_000591935.1_ASM59193v1	-	44327_6
Pseudomonas aeruginosa	287	PRJNA287647	287647	Proteobacteria	Gammaproteobacteria	6.84774	66.1	-	LFMN01	21	6581	6396	7/17/15	3/17/17	Contig	The Mayo Clinic	SAMN03787331	GCA_001086625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/625/GCA_001086625.1_ASM108662v1	26450729	ATCC 27853
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16791	51.5	-	FFBM01	95	2504	2158	2/9/16	3/19/17	Scaffold	SC	SAMEA2674304	GCA_900032085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/085/GCA_900032085.1_14555_5_82	-	2842STDY5881423
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.65315	38.9	-	MUOF01	145	1667	1484	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187420	GCA_002012505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/505/GCA_002012505.1_ASM201250v1	28293542	CA22311
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.11783	39.6	-	CMBB01	46	2356	2115	3/21/15	3/4/17	Contig	SC	SAMEA1028624	GCA_001108145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/145/GCA_001108145.1_7004_6_41	-	SMRU2849
Escherichia coli KTE210	1181756	PRJNA163433	163433	Proteobacteria	Gammaproteobacteria	4.92487	50.7	-	ANTN01	15	5042	4772	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974065	GCA_000351145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/145/GCA_000351145.1_Esch_coli_KTE210_V1	-	KTE210
Mycobacterium tuberculosis TKK_02_0037	1295753	PRJNA190961	190961	Terrabacteria group	Actinobacteria	4.3892	65.6	-	JMAT01	5	4262	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925647	GCA_000659505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/505/GCA_000659505.1_Myco_tube_TKK_02_0037_V1	-	TKK_02_0037
Listeria monocytogenes	1639	PRJEB10797	310523	Terrabacteria group	Firmicutes	2.89863	37.9	-	CYVG01	23	2925	2862	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540897	GCA_001565735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/735/GCA_001565735.1_LM6186_assembly	-	LM6186
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.71251	30.6	-	MKBA01	41	1798	1672	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532248	GCA_001764635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/635/GCA_001764635.1_ASM176463v1	-	BCW_4728
Salmonella enterica subsp. enterica serovar Typhimurium str. STm5	1218153	PRJNA171803	171803	Proteobacteria	Gammaproteobacteria	4.93107	52.2	-	AMEH02	449	5249	4777	11/13/12	2/26/17	Contig	University of Melbourne	SAMN02225276	GCA_000312805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/805/GCA_000312805.2_STm5.2	-	STm5
Staphylococcus aureus MISS6012	1409390	PRJNA223710	223710	Terrabacteria group	Firmicutes	2.86926	32.8	-	JBNF01	18	3016	2846	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381451	GCA_000538335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/335/GCA_000538335.1_Stap_aure_MISS6012_V1	-	MISS6012
Staphylococcus aureus HOAG6054	1409391	PRJNA223711	223711	Terrabacteria group	Firmicutes	2.96567	32.9	-	JBNE01	29	3140	2965	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381452	GCA_000538355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/355/GCA_000538355.1_Stap_aure_HOAG6054_V1	-	HOAG6054
Salmonella enterica subsp. enterica serovar Typhimurium str. STm1	1218143	PRJNA171774	171774	Proteobacteria	Gammaproteobacteria	4.94259	52.2	-	AMDX02	115	5065	4830	11/13/12	2/26/17	Contig	University of Melbourne	SAMN02221889	GCA_000312825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/825/GCA_000312825.2_STm1.2	23792739	STm1
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.6423	30.6	-	MKBE01	36	1728	1603	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532252	GCA_001764715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/715/GCA_001764715.1_ASM176471v1	-	BCW_4737
Listeria monocytogenes	1639	PRJEB10798	310524	Terrabacteria group	Firmicutes	2.96632	37.8	-	CYVV01	38	2993	2925	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540898	GCA_001565755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/755/GCA_001565755.1_LM73068_assembly	-	LM73068
Mycobacterium tuberculosis TKK_02_0040	1295756	PRJNA190964	190964	Terrabacteria group	Actinobacteria	4.40164	65.6	-	JMAS01	1	4277	4115	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925650	GCA_000659525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/525/GCA_000659525.1_Myco_tube_TKK_02_0040_V1	-	TKK_02_0040
Escherichia coli KTE212	1181758	PRJNA163437	163437	Proteobacteria	Gammaproteobacteria	4.88604	50.9	-	ANTO01	5	4930	4614	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974067	GCA_000351165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/165/GCA_000351165.1_Esch_coli_KTE212_V1	-	KTE212
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	1.97373	39.7	-	CKTS01	46	2170	1970	3/21/15	3/4/17	Contig	SC	SAMEA1025794	GCA_001108165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/165/GCA_001108165.1_6823_2_14	-	SMRU1886
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.69725	39	-	MUOK01	158	1699	1520	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187425	GCA_002012555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/555/GCA_002012555.1_ASM201255v1	28293542	CA22339
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15189	51.6	-	FFCY01	78	2494	2133	2/9/16	3/21/17	Scaffold	SC	SAMEA2674200	GCA_900032095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/095/GCA_900032095.1_14555_6_26	-	2842STDY5881463
Pseudomonas aeruginosa	287	PRJNA287647	287647	Proteobacteria	Gammaproteobacteria	7.54717	66.1	-	LFMP01	32	7145	6944	7/17/15	3/17/17	Contig	The Mayo Clinic	SAMN03787333	GCA_001086635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/635/GCA_001086635.1_ASM108663v1	26450729	BTP032
Acinetobacter baumannii 44467_9	1310983	PRJNA195061	195061	Proteobacteria	Gammaproteobacteria	4.08491	39.1	-	JGBK01	216	4115	3752	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644689	GCA_000591955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/955/GCA_000591955.1_ASM59195v1	-	44467_9
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.22718	35.5	-	FJPV01	237	2259	2112	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888178	GCA_900073285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/285/GCA_900073285.1_SA223	-	-
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.09748	41.1	-	FIQQ01	34	2111	1990	2/10/16	3/19/17	Contig	SC	SAMEA1566045	GCA_900063295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/295/GCA_900063295.1_8525_5_54	-	SS78
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.71818	50.4	-	CXBM01	415	5051	4541	7/16/15	2/24/17	Scaffold	SC	SAMEA954575	GCA_001260235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/235/GCA_001260235.1_5236_1_7	-	ShIB717_440733
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.00397	68.3	-	CGFE01	66	7223	6747	3/15/15	3/26/17	Scaffold	SC	SAMEA949348	GCA_001327195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/195/GCA_001327195.1_7915_5_23	-	I6 4043-3096
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	4.0389	47.4	-	NMSU01	66	3902	3735	8/31/17	9/2/17	Scaffold	University of Alberta	SAMN07350488	GCA_002284115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/115/GCA_002284115.1_ASM228411v1	-	OYP8F12
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.21707	28.9	-	FAIM01	713	3854	3653	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664306	GCA_900014155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/155/GCA_900014155.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae subsp. pneumoniae KPNIH21	1168062	PRJNA156861	156861	Proteobacteria	Gammaproteobacteria	5.75775	57.2	-	AKAL01	178	6005	5641	7/24/12	5/18/17	Contig	NISC	SAMN01057652	GCA_000281495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/495/GCA_000281495.1_KPNIH21_1	22914622	KPNIH21
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.08877	45.3	-	LHRF01	90	4905	4684	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN03945136	GCA_002198175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/175/GCA_002198175.1_ASM219817v1	-	CFSAN001605
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.98724	37.7	-	FXGL01	163	3096	2885	4/26/17	5/6/17	Scaffold	SC	SAMEA3893622	GCA_900179055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/055/GCA_900179055.1_19789_6_157	-	VREN3240
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.63963	31.4	-	FBNW01	19	1690	1601	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683430	GCA_001498535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/535/GCA_001498535.1_H070680142	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.82816	63.9	-	CSZS01	1183	5830	5165	3/24/15	3/18/17	Scaffold	SC	SAMEA1317695	GCA_001216745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/745/GCA_001216745.1_7520_7_46	-	PAP166
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15922	64.1	-	CSYQ01	16	5260	5087	3/24/15	3/18/17	Scaffold	SC	SAMEA1464883	GCA_001216805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/805/GCA_001216805.1_7396_8_88	-	PAP136
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65952	31.4	-	FBJJ01	21	1716	1630	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683310	GCA_001498555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/555/GCA_001498555.1_EC3466	-	n/a
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.04527	37.6	-	FXGG01	168	3190	2921	4/26/17	5/6/17	Scaffold	SC	SAMEA3893628	GCA_900179065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/065/GCA_900179065.1_19789_6_163	-	VREN3283
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.07999	45.3	-	LHRG01	37	4896	4679	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN03945137	GCA_002198185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/185/GCA_002198185.1_ASM219818v1	-	CFSAN001608
Klebsiella pneumoniae subsp. pneumoniae KPNIH22	1168063	PRJNA156863	156863	Proteobacteria	Gammaproteobacteria	5.7497	57.2	-	AKAM01	165	5985	5628	7/24/12	5/18/17	Contig	NISC	SAMN01057658	GCA_000281515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/515/GCA_000281515.1_KPNIH22_1	22914622	KPNIH22
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.0957	28.3	-	FAKD01	215	3808	3704	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664349	GCA_900014165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/165/GCA_900014165.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.92609	47.5	-	NMSW01	185	3813	3547	8/31/17	9/2/17	Scaffold	University of Alberta	SAMN07350486	GCA_002284125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/125/GCA_002284125.1_ASM228412v1	-	OYP8A01
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.04499	68.2	-	CFWG01	61	7266	6751	3/15/15	3/26/17	Scaffold	SC	SAMEA949352	GCA_001327215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/215/GCA_001327215.1_7915_5_25	-	DB
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.65662	50.8	-	CXKA01	391	5259	4470	7/16/15	2/24/17	Scaffold	SC	SAMEA2004865	GCA_001260255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/255/GCA_001260255.1_8290_4_32	-	98909
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.11822	41.1	-	FIGF01	48	2161	2017	2/10/16	3/19/17	Contig	SC	SAMEA1316645	GCA_900063545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/545/GCA_900063545.1_7114_5_3	-	LSS3
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.13994	35.4	-	FJON01	146	2191	2057	9/30/16	3/21/17	Contig	INSTITUT PASTEUR	SAMEA3888069	GCA_900073295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/295/GCA_900073295.1_SA4	-	-
Acinetobacter baumannii 25691_10	1310934	PRJNA195011	195011	Proteobacteria	Gammaproteobacteria	4.10166	39.1	-	JGAS01	147	4111	3845	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614539	GCA_000591975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/975/GCA_000591975.1_ASM59197v1	-	25691_10
Pseudomonas aeruginosa	287	PRJNA287647	287647	Proteobacteria	Gammaproteobacteria	6.85713	66	-	LFMU01	44	6525	6338	7/17/15	3/17/17	Contig	The Mayo Clinic	SAMN03787338	GCA_001086645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/645/GCA_001086645.1_ASM108664v1	26450729	BTP037
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.10042	51.8	-	FFDR01	91	2457	2103	2/9/16	3/21/17	Scaffold	SC	SAMEA2674243	GCA_900032105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/105/GCA_900032105.1_14555_6_45	-	2842STDY5881482
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.66387	38.9	-	MUOL01	143	1658	1483	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187426	GCA_002012565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/565/GCA_002012565.1_ASM201256v1	28293542	CA22362
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.10383	39.5	-	CNXP02	191	2278	2075	3/22/15	3/11/17	Contig	SC	SAMEA1032646	GCA_001108285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/285/GCA_001108285.2_7001_3_4	-	R34-3138
Escherichia coli KTE213	1181759	PRJNA163439	163439	Proteobacteria	Gammaproteobacteria	5.08263	50.5	-	ANTP01	4	5207	4915	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974068	GCA_000351185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/185/GCA_000351185.1_Esch_coli_KTE213_V1	-	KTE213
Mycobacterium tuberculosis TKK_02_0041	1295757	PRJNA190965	190965	Terrabacteria group	Actinobacteria	4.40388	65.6	-	JMAR01	1	4278	4115	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925651	GCA_000659545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/545/GCA_000659545.1_Myco_tube_TKK_02_0041_V1	-	TKK_02_0041
Listeria monocytogenes	1639	PRJEB10799	310525	Terrabacteria group	Firmicutes	3.08124	37.8	-	CYWC01	56	3157	3073	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540899	GCA_001565775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/775/GCA_001565775.1_LM77097_assembly	-	LM77097
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.81999	30.3	-	MKBG01	172	1930	1786	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532254	GCA_001764745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/745/GCA_001764745.1_ASM176474v1	-	BCW_4741
Salmonella enterica subsp. enterica serovar Typhimurium str. STm8	1218148	PRJNA171798	171798	Proteobacteria	Gammaproteobacteria	4.93534	52.2	-	AMDZ02	95	5062	4822	11/13/12	2/26/17	Contig	University of Melbourne	SAMN02225278	GCA_000312845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/845/GCA_000312845.2_STm8.2	23792739	STm8
Staphylococcus aureus HOAG6057	1409392	PRJNA223712	223712	Terrabacteria group	Firmicutes	2.93143	32.9	-	JBND01	34	3093	2915	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381453	GCA_000538375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/375/GCA_000538375.1_Stap_aure_HOAG6057_V1	-	HOAG6057
Staphylococcus aureus SJOS6076	1409393	PRJNA223713	223713	Terrabacteria group	Firmicutes	2.90302	32.7	-	JBNC01	12	3062	2898	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381454	GCA_000538395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/395/GCA_000538395.1_Stap_aure_SJOS6076_V1	-	SJOS6076
Salmonella enterica subsp. enterica serovar Typhimurium str. STm3	1218145	PRJNA171795	171795	Proteobacteria	Gammaproteobacteria	4.94431	52.1	-	AMEB02	105	5087	4830	11/13/12	2/26/17	Contig	University of Melbourne	SAMN02225274	GCA_000312865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/865/GCA_000312865.2_STm3.2	23792739	STm3
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.65498	30.4	-	MKBI01	61	1726	1588	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532256	GCA_001764795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/795/GCA_001764795.1_95	-	BCW_4744
Listeria monocytogenes	1639	PRJEB10800	310526	Terrabacteria group	Firmicutes	2.93657	37.8	-	CYWL01	31	2991	2927	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540900	GCA_001565795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/795/GCA_001565795.1_LM80661_assembly	-	LM80661
Mycobacterium tuberculosis TKK_02_0042	1295758	PRJNA190966	190966	Terrabacteria group	Actinobacteria	4.40563	65.6	-	JMAQ01	4	4282	4121	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925652	GCA_000659565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/565/GCA_000659565.1_Myco_tube_TKK_02_0042_V1	-	TKK_02_0042
Escherichia coli KTE214	1181760	PRJNA163441	163441	Proteobacteria	Gammaproteobacteria	5.40537	50.6	-	ANTQ01	7	5559	5184	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974069	GCA_000351205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/205/GCA_000351205.1_Esch_coli_KTE214_V1	-	KTE214
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12021	39.5	-	CMNW01	21	2326	2096	3/22/15	3/4/17	Contig	SC	SAMEA2061478	GCA_001108365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/365/GCA_001108365.1_9803_7_19	-	23F
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.69226	39	-	MUON01	159	1677	1486	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187428	GCA_002012575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/575/GCA_002012575.1_ASM201257v1	28293542	CA24004
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16652	51.5	-	FEQI01	81	2536	2154	2/9/16	3/21/17	Scaffold	SC	SAMEA2674524	GCA_900032415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/415/GCA_900032415.1_14355_7_58	-	2842STDY5881687
Pseudomonas aeruginosa	287	PRJNA287647	287647	Proteobacteria	Gammaproteobacteria	6.87878	66	-	LFMO01	15	6531	6362	7/17/15	3/17/17	Contig	The Mayo Clinic	SAMN03787332	GCA_001086655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/655/GCA_001086655.1_ASM108665v1	26450729	BTP031
Acinetobacter baumannii 25766_2	1310916	PRJNA194993	194993	Proteobacteria	Gammaproteobacteria	4.06976	39.2	-	JGBE01	120	4056	3769	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614527	GCA_000591995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/995/GCA_000591995.1_ASM59199v1	-	25766_2
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.24801	35.6	-	FJPM01	228	2300	2137	9/30/16	3/21/17	Contig	INSTITUT PASTEUR	SAMEA3888085	GCA_900073305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/305/GCA_900073305.1_SA34	-	-
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.28195	41.2	-	FIGH01	31	2263	2111	2/10/16	3/19/17	Contig	SC	SAMEA1316545	GCA_900063555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/555/GCA_900063555.1_7114_5_30	-	LSS30
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.79765	50.7	-	CXGR01	440	5451	4663	7/16/15	2/24/17	Scaffold	SC	SAMEA1324273	GCA_001260275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/275/GCA_001260275.1_7655_8_11	-	H112700290
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.18933	68.1	-	CHFE01	94	7472	6932	4/21/15	3/26/17	Scaffold	SC	SAMEA949356	GCA_001327235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/235/GCA_001327235.1_7915_5_27	-	DC
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.91217	47.7	-	NMTA01	66	3650	3513	8/31/17	9/2/17	Scaffold	University of Alberta	SAMN07350482	GCA_002284175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/175/GCA_002284175.1_ASM228417v1	-	OYP6F08
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.15845	28.8	-	FAKQ01	832	3866	3659	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664362	GCA_900014185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/185/GCA_900014185.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae subsp. pneumoniae KPNIH8	1094168	PRJNA73839	73839	Proteobacteria	Gammaproteobacteria	5.71471	57.2	-	AKAA01	182	5963	5583	7/24/12	5/18/17	Contig	NISC	SAMN01057612	GCA_000281555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/555/GCA_000281555.1_KPNIH8_1	22914622	KPNIH8
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.09294	45.3	-	LHQY01	74	4904	4693	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN03945129	GCA_002198195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/195/GCA_002198195.1_ASM219819v1	-	CFSAN001607
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.06211	37.6	-	FXGM01	171	3200	2923	4/26/17	5/6/17	Scaffold	SC	SAMEA3893627	GCA_900179075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/075/GCA_900179075.1_19789_6_162	-	VREN3280
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.62424	31.6	-	FBBU01	17	1627	1568	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683108	GCA_001498595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/595/GCA_001498595.1_EC6147	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15904	64.1	-	CSVZ01	18	5261	5085	3/24/15	3/18/17	Scaffold	SC	SAMEA1464831	GCA_001216825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/825/GCA_001216825.1_7396_7_25	-	PAP073
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15848	64.1	-	CSXS01	29	5263	5069	3/24/15	3/18/17	Scaffold	SC	SAMEA1464932	GCA_001216865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/865/GCA_001216865.1_7396_8_64	-	PAP112
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.72108	31.3	-	FBHV01	38	1801	1694	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683268	GCA_001498615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/615/GCA_001498615.1_UNLLIII	-	n/a
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.96476	37.7	-	FXGH01	157	3072	2871	4/26/17	5/6/17	Scaffold	SC	SAMEA3893623	GCA_900179085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/085/GCA_900179085.1_19789_6_158	-	VREN3241
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.08047	45.3	-	LHQX01	73	4894	4681	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN03945128	GCA_002198215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/215/GCA_002198215.1_CDC_K5280	-	CFSAN001598
Klebsiella pneumoniae subsp. pneumoniae KPNIH11	1094171	PRJNA73845	73845	Proteobacteria	Gammaproteobacteria	5.71402	57.2	-	AKAD01	185	5959	5546	7/24/12	5/18/17	Contig	NISC	SAMN01057620	GCA_000281575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/575/GCA_000281575.1_KPNIH11_1	22914622	KPNIH11
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.14166	28.7	-	FANR01	789	3761	3627	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664441	GCA_900014195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/195/GCA_900014195.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.95761	47.5	-	NMTB01	91	3762	3582	8/31/17	9/2/17	Scaffold	University of Alberta	SAMN07350481	GCA_002284185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/185/GCA_002284185.1_ASM228418v1	-	OYP6E07
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.08802	68.2	-	CGHC01	58	7315	6824	3/15/15	3/26/17	Scaffold	SC	SAMEA949370	GCA_001327255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/255/GCA_001327255.1_7915_5_30	-	Soil
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.50721	50.9	-	CXBC01	367	4829	4339	7/16/15	2/24/17	Scaffold	SC	SAMEA954836	GCA_001260315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/315/GCA_001260315.1_5008_8_2	-	ShIB2_401078
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.15427	41.4	-	FIGG01	23	2158	2038	2/10/16	3/19/17	Contig	SC	SAMEA1316553	GCA_900063565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/565/GCA_900063565.1_7114_5_31	-	LSS31
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.08158	35.4	-	FJPC01	195	2133	2002	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888077	GCA_900073315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/315/GCA_900073315.1_SA25	-	-
Acinetobacter baumannii 25766_3	1310917	PRJNA194994	194994	Proteobacteria	Gammaproteobacteria	4.20274	39.2	-	JGBD01	151	4210	3925	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614528	GCA_000592015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/015/GCA_000592015.1_ASM59201v1	-	25766_3
Pseudomonas aeruginosa	287	PRJNA287647	287647	Proteobacteria	Gammaproteobacteria	7.08558	66	-	LFMV01	41	6917	6698	7/17/15	3/17/17	Contig	The Mayo Clinic	SAMN03787339	GCA_001086725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/725/GCA_001086725.1_ASM108672v1	26450729	BTP038
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.1666	51.6	-	FEQV01	59	2504	2174	2/9/16	3/19/17	Scaffold	SC	SAMEA2674487	GCA_900032425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/425/GCA_900032425.1_14355_8_26	-	2842STDY5881751
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.70732	38.9	-	MUOM01	274	1715	1518	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187427	GCA_002012615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/615/GCA_002012615.1_ASM201261v1	28293542	CA22393
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05213	39.6	-	CNTH02	239	2167	1976	3/23/15	3/11/17	Contig	SC	SAMEA1032559	GCA_001108425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/425/GCA_001108425.2_6999_4_17	-	127530
Escherichia coli KTE216	1181762	PRJNA163445	163445	Proteobacteria	Gammaproteobacteria	5.30989	50.7	-	ANTR01	16	5562	5193	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974071	GCA_000351225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/225/GCA_000351225.1_Esch_coli_KTE216_V1	-	KTE216
Mycobacterium tuberculosis TKK_02_0043	1295759	PRJNA190967	190967	Terrabacteria group	Actinobacteria	4.41126	65.6	-	JMAP01	4	4290	4118	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925653	GCA_000659585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/585/GCA_000659585.1_Myco_tube_TKK_02_0043_V1	-	TKK_02_0043
Listeria monocytogenes	1639	PRJEB10801	310527	Terrabacteria group	Firmicutes	2.93817	37.9	-	CYWM01	33	2988	2923	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540901	GCA_001565815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/815/GCA_001565815.1_LM83088_assembly	-	LM83088
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.74726	30.6	-	MKBJ01	49	1827	1696	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532258	GCA_001764815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/815/GCA_001764815.1_ASM176481v1	-	BCW_4748
Salmonella enterica subsp. enterica serovar Typhimurium str. STm4	1218146	PRJNA171796	171796	Proteobacteria	Gammaproteobacteria	4.9671	52.1	-	AMEC02	147	5082	4836	11/13/12	2/26/17	Contig	University of Melbourne	SAMN02225275	GCA_000312885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/885/GCA_000312885.2_STm4.2	23792739	STm4
Staphylococcus aureus OCMM6035	1409395	PRJNA223715	223715	Terrabacteria group	Firmicutes	2.87255	32.7	-	JBNA01	31	3038	2855	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381456	GCA_000538415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/415/GCA_000538415.1_Stap_aure_OCMM6035_V1	-	OCMM6035
Staphylococcus aureus OCMM6037	1409396	PRJNA223716	223716	Terrabacteria group	Firmicutes	2.91131	32.8	-	JBMZ01	13	3089	2930	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381457	GCA_000538435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/435/GCA_000538435.1_Stap_aure_OCMM6037_V1	-	OCMM6037
Salmonella enterica subsp. enterica serovar Typhimurium str. STm10	1218150	PRJNA171800	171800	Proteobacteria	Gammaproteobacteria	4.94611	52.2	-	AMEE02	104	5072	4830	11/13/12	2/26/17	Contig	University of Melbourne	SAMN02225280	GCA_000312905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/905/GCA_000312905.2_STm10.2	23792739	STm10
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.70444	30.4	-	MKBK01	48	1767	1670	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532259	GCA_001764825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/825/GCA_001764825.1_ASM176482v1	-	BCW_4749
Listeria monocytogenes	1639	PRJEB10802	310528	Terrabacteria group	Firmicutes	2.81008	38.1	-	CYXE01	16	2808	2735	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540902	GCA_001565835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/835/GCA_001565835.1_SLCC85_assembly	-	SLCC85
Mycobacterium tuberculosis TKK_02_0044	1295760	PRJNA190968	190968	Terrabacteria group	Actinobacteria	4.39799	65.6	-	JMAO01	1	4275	4111	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925654	GCA_000659605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/605/GCA_000659605.1_Myco_tube_TKK_02_0044_V1	-	TKK_02_0044
Escherichia coli KTE220	1181766	PRJNA163453	163453	Proteobacteria	Gammaproteobacteria	5.1241	50.5	-	ANTS01	11	5237	4895	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974075	GCA_000351245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/245/GCA_000351245.1_Esch_coli_KTE220_V1	-	KTE220
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09067	39.6	-	CMIV01	45	2316	2072	3/23/15	3/4/17	Contig	SC	SAMEA1029314	GCA_001108565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/565/GCA_001108565.1_7038_7_23	-	SMRU3023
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.67775	39	-	MUOO01	177	1682	1507	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187429	GCA_002012635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/635/GCA_002012635.1_ASM201263v1	28293542	CA26024
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.17402	51.5	-	FERO01	85	2530	2157	2/9/16	3/21/17	Scaffold	SC	SAMEA2673951	GCA_900032445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/445/GCA_900032445.1_14355_4_57	-	2842STDY5881014
Pseudomonas aeruginosa	287	PRJNA287647	287647	Proteobacteria	Gammaproteobacteria	6.89976	66	-	LFMQ01	22	6559	6379	7/17/15	3/17/17	Contig	The Mayo Clinic	SAMN03787334	GCA_001086735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/735/GCA_001086735.1_ASM108673v1	26450729	BTP033
Acinetobacter baumannii 25935_9	1310943	PRJNA195020	195020	Proteobacteria	Gammaproteobacteria	4.03148	38.9	-	JGAK01	182	4022	3728	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614547	GCA_000592035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/035/GCA_000592035.1_ASM59203v1	-	25935_9
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.19093	35.5	-	FJOO01	150	2234	2106	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888149	GCA_900073325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/325/GCA_900073325.1_SA109	-	-
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.16074	41	-	FIGS01	26	2161	2015	2/10/16	3/19/17	Contig	SC	SAMEA1316688	GCA_900063585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/585/GCA_900063585.1_7114_5_34	-	LSS34
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.92378	50.4	-	CXLS01	438	5588	4736	7/16/15	2/24/17	Scaffold	SC	SAMEA2003999	GCA_001260355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/355/GCA_001260355.1_8290_5_4	-	26986104
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.12767	68.2	-	CFVX01	85	7376	6885	3/15/15	3/26/17	Scaffold	SC	SAMEA949373	GCA_001327275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/275/GCA_001327275.1_7915_5_31	-	D6 8346-3058
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	4.03644	47.6	-	NMTC01	161	3878	3637	8/31/17	9/2/17	Scaffold	University of Alberta	SAMN07350480	GCA_002284205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/205/GCA_002284205.1_ASM228420v1	-	OYP6D06
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.40884	28.8	-	FANQ01	293	4180	4020	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664442	GCA_900014205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/205/GCA_900014205.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae subsp. pneumoniae KPNIH16	1128950	PRJNA80227	80227	Proteobacteria	Gammaproteobacteria	5.71548	57.2	-	AKAG01	178	5963	5574	7/24/12	5/18/17	Contig	NISC	SAMN01057641	GCA_000281595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/595/GCA_000281595.1_KPNIH16_1	22914622	KPNIH16
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.07849	45.3	-	LHRI01	44	4901	4679	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN03945139	GCA_002198255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/255/GCA_002198255.1_ASM219825v1	-	CFSAN018768
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.06237	37.6	-	FXGK01	168	3197	2925	4/26/17	5/6/17	Scaffold	SC	SAMEA3893629	GCA_900179095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/095/GCA_900179095.1_19789_6_164	-	VREN3284
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66415	31.3	-	FBFD01	23	1716	1627	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683195	GCA_001498635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/635/GCA_001498635.1_EC4808	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.83057	64.2	-	CSYB01	54	4863	4702	3/24/15	3/18/17	Scaffold	SC	SAMEA1464958	GCA_001216885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/885/GCA_001216885.1_7396_8_73	-	PAP121
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.83212	64.2	-	CSYA01	53	4865	4713	3/24/15	3/18/17	Scaffold	SC	SAMEA1464946	GCA_001216905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/905/GCA_001216905.1_7396_8_72	-	PAP120
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.64959	31.6	-	FBOD01	20	1685	1612	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683445	GCA_001498655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/655/GCA_001498655.1_H051960469	-	n/a
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.06581	37.6	-	FXGJ01	161	3214	2923	4/26/17	5/6/17	Scaffold	SC	SAMEA3893630	GCA_900179105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/105/GCA_900179105.1_19789_6_165	-	VREN3285
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.09022	45.3	-	LHQZ01	56	4918	4693	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN03945130	GCA_002198275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/275/GCA_002198275.1_ASM219827v1	-	CFSAN001602
Klebsiella pneumoniae subsp. pneumoniae KPNIH19	1128953	PRJNA80233	80233	Proteobacteria	Gammaproteobacteria	5.71589	57.2	-	AKAJ01	201	5973	5322	7/24/12	5/18/17	Contig	NISC	SAMN01057638	GCA_000281615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/615/GCA_000281615.1_KPNIH19_1	"2,291,462,227,353,750"	KPNIH19
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.06839	28.7	-	FAAJ01	261	3803	3548	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664094	GCA_900014225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/225/GCA_900014225.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.93496	47.7	-	NMTE01	57	3636	3511	8/31/17	9/2/17	Scaffold	University of Alberta	SAMN07350478	GCA_002284245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/245/GCA_002284245.1_ASM228424v1	-	OYP4H11
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.25812	68.1	-	CFWD01	69	7492	6988	3/15/15	3/26/17	Scaffold	SC	SAMEA949376	GCA_001327295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/295/GCA_001327295.1_7915_5_28	-	109/96
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.54762	50.8	-	CWTJ01	373	5168	4321	7/17/15	2/24/17	Scaffold	SC	SAMEA3345028	GCA_001260375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/375/GCA_001260375.1_H14112034001	-	34001ss_1
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.33017	41.1	-	FIGN01	52	2337	2199	2/10/16	3/19/17	Contig	SC	SAMEA1316663	GCA_900063595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/595/GCA_900063595.1_7114_5_37	-	LSS37
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.09986	35.5	-	FJPK01	195	2098	1979	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888079	GCA_900073335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/335/GCA_900073335.1_SA28	-	-
Acinetobacter baumannii 24975_1	1310945	PRJNA195022	195022	Proteobacteria	Gammaproteobacteria	4.03353	38.9	-	JGAI01	240	4036	3732	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614548	GCA_000592055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/055/GCA_000592055.1_ASM59205v1	-	24975_1
Pseudomonas aeruginosa	287	PRJNA287647	287647	Proteobacteria	Gammaproteobacteria	6.87338	66	-	LFMS01	19	6531	6352	7/17/15	3/17/17	Contig	The Mayo Clinic	SAMN03787336	GCA_001086745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/745/GCA_001086745.1_ASM108674v1	26450729	BTP035
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12756	51.7	-	FESL01	76	2490	2164	2/9/16	3/19/17	Scaffold	SC	SAMEA2673816	GCA_900032455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/455/GCA_900032455.1_14355_5_16	-	2842STDY5881069
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.64	39.2	-	MUOP01	272	1643	1455	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187430	GCA_002012645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/645/GCA_002012645.1_ASM201264v1	28293542	CC22093
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	1.97971	39.8	-	CLUZ01	35	2168	1962	3/21/15	3/4/17	Contig	SC	SAMEA1026043	GCA_001108605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/605/GCA_001108605.1_6983_3_50	-	SMRU2258
Escherichia coli KTE224	1181770	PRJNA163461	163461	Proteobacteria	Gammaproteobacteria	5.33409	50.5	-	ANTT01	13	5343	4998	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00974079	GCA_000351265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/265/GCA_000351265.1_Esch_coli_KTE224_V1	-	KTE224
Mycobacterium tuberculosis TKK_02_0047	1295763	PRJNA190971	190971	Terrabacteria group	Actinobacteria	4.40446	65.6	-	JMAN01	1	4272	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925657	GCA_000659625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/625/GCA_000659625.1_Myco_tube_TKK_02_0047_V1	-	TKK_02_0047
Listeria monocytogenes	1639	PRJEB10803	310529	Terrabacteria group	Firmicutes	2.87522	37.9	-	CYXD01	25	2908	2846	1/29/16	3/1/17	Contig	INSTITUT PASTEUR	SAMEA3540903	GCA_001565855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/855/GCA_001565855.1_SLCC98_assembly	-	SLCC98
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.71822	30.4	-	MKBL01	22	1780	1618	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532257	GCA_001764845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/845/GCA_001764845.1_ASM176484v1	-	BCW_4747
Salmonella enterica subsp. enterica serovar Enteritidis str. LA5	1147754	PRJEA82545	82545	Proteobacteria	Gammaproteobacteria	4.68721	52.0987	plasmid pSLA5:NC_019002.1/HE663166.1	CAGR02	75	4802	4552	2/16/12	5/19/17	Contig	Institut National de la Recherche Agronomique (INRA)	SAMEA2272327	GCA_000313715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/715/GCA_000313715.2_ASM31371v2	-	LA5
Staphylococcus aureus SCOA6011	1409397	PRJNA223717	223717	Terrabacteria group	Firmicutes	2.87366	32.8	-	JBMY01	8	3020	2862	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381458	GCA_000538455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/455/GCA_000538455.1_Stap_aure_SCOA6011_V1	-	SCOA6011
Staphylococcus aureus WMCS6016	1409400	PRJNA223720	223720	Terrabacteria group	Firmicutes	2.86637	32.8	-	JBMV01	30	3007	2823	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381461	GCA_000538475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/475/GCA_000538475.1_Stap_aure_WMCS6016_V1	-	WMCS6016
Salmonella enterica subsp. enterica serovar Typhimurium str. STm2	1218144	PRJNA171794	171794	Proteobacteria	Gammaproteobacteria	4.9991	52.1	-	AMDY01	256	5230	4913	11/13/12	5/19/17	Contig	University of Melbourne	SAMN02225273	GCA_000314915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/915/GCA_000314915.1_ASM31491v1	23792739	STm2
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.66172	30.5	-	MKBM01	60	1734	1630	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532260	GCA_001764875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/875/GCA_001764875.1_ASM176487v1	-	BCW_4753
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	3.077	37.8	-	LSPU01	79	3167	3056	2/29/16	3/1/17	Contig	FDA/CFSAN	SAMN04414891	GCA_001577855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/855/GCA_001577855.1_CFSAN026594_01.1	-	CFSAN026594
Mycobacterium tuberculosis TKK_02_0048	1295764	PRJNA190972	190972	Terrabacteria group	Actinobacteria	4.39959	65.6	-	JMAM01	1	4280	4116	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925658	GCA_000659645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/645/GCA_000659645.1_Myco_tube_TKK_02_0048_V1	-	TKK_02_0048
Escherichia coli KTE228	1181774	PRJNA163469	163469	Proteobacteria	Gammaproteobacteria	5.23523	50.6	-	ANTU01	7	5319	5026	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974083	GCA_000351285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/285/GCA_000351285.1_Esch_coli_KTE228_V1	-	KTE228
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04361	39.6	-	CKLZ01	50	2248	2024	3/21/15	3/11/17	Contig	SC	SAMEA1888689	GCA_001108665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/665/GCA_001108665.1_6649_7_16	-	SMRU544
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.72711	39	-	MUOQ01	60	1707	1543	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187431	GCA_002012655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/655/GCA_002012655.1_ASM201265v1	28293542	CC22402
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.13097	51.7	-	FESS01	84	2499	2155	2/9/16	3/19/17	Scaffold	SC	SAMEA2673872	GCA_900032465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/465/GCA_900032465.1_14355_5_33	-	2842STDY5881086
Pseudomonas aeruginosa	287	PRJNA287647	287647	Proteobacteria	Gammaproteobacteria	6.9247	66	-	LFMR01	16	6643	6425	7/17/15	3/17/17	Contig	The Mayo Clinic	SAMN03787335	GCA_001086755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/755/GCA_001086755.1_ASM108675v1	26450729	BTP034
Acinetobacter baumannii 25766_1	1310915	PRJNA194992	194992	Proteobacteria	Gammaproteobacteria	4.14779	38.8	-	JGBF01	286	4165	3822	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614514	GCA_000592075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/075/GCA_000592075.1_ASM59207v1	-	25766_1
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.14317	35.5	-	FJOZ01	149	2177	2053	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888169	GCA_900073345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/345/GCA_900073345.1_SA197	-	-
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.02575	41.3	-	FIGM01	22	2031	1930	2/10/16	8/21/17	Contig	SC	SAMEA1316657	GCA_900063605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/605/GCA_900063605.1_7114_5_4	-	LSS4
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.75216	50.7	-	CXHD01	385	5394	4595	7/16/15	2/24/17	Scaffold	SC	SAMEA2004798	GCA_001260395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/395/GCA_001260395.1_8289_7_35	-	75544
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.13161	68.2	-	CFWC01	104	7382	6861	3/15/15	3/26/17	Scaffold	SC	SAMEA949379	GCA_001327315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/315/GCA_001327315.1_7915_5_29	-	490
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.86916	47.6	-	NMTF01	448	3857	3400	8/31/17	9/2/17	Scaffold	University of Alberta	SAMN07350477	GCA_002284255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/255/GCA_002284255.1_ASM228425v1	-	OYP4H08
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.32038	28.9	-	FABI01	1538	4005	3787	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664120	GCA_900014235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/235/GCA_900014235.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae subsp. pneumoniae KPNIH23	1168064	PRJNA156865	156865	Proteobacteria	Gammaproteobacteria	5.74039	57.2	-	AKAN01	338	6010	5477	7/24/12	5/18/17	Contig	NISC	SAMN01057657	GCA_000281635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/635/GCA_000281635.1_KPNIH23_1	"2,291,462,227,353,750"	KPNIH23
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.08997	45.3	-	LHRC01	87	4908	4691	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN03945133	GCA_002198295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/295/GCA_002198295.1_ASM219829v1	-	CFSAN001599
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.05334	37.6	-	FXGI01	173	3182	2942	4/26/17	5/6/17	Scaffold	SC	SAMEA3893624	GCA_900179115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/115/GCA_900179115.1_19789_6_159	-	VREN3242
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.60411	31.8	-	FBQZ01	1	1597	1529	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683211	GCA_001498675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/675/GCA_001498675.1_Campylobacter_coli_C9A1	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.34834	64.1	-	CSWP01	25	5461	5283	3/24/15	3/18/17	Scaffold	SC	SAMEA1464899	GCA_001216925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/925/GCA_001216925.1_7396_7_40	-	PAP088
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.83711	64.1	-	CSYR01	21	4835	4666	3/24/15	3/18/17	Scaffold	SC	SAMEA1464926	GCA_001216965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/965/GCA_001216965.1_7396_8_91	-	PAP139
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66447	31.4	-	FBEY01	15	1716	1629	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683191	GCA_001498695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/695/GCA_001498695.1_EC5806	-	n/a
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.1748	37.4	-	FXHX01	209	3313	3063	4/26/17	5/6/17	Scaffold	SC	SAMEA3893524	GCA_900179125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/125/GCA_900179125.1_19789_6_38	-	VREN1532
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.08875	45.3	-	LHRH01	56	4923	4683	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN03945138	GCA_002198305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/305/GCA_002198305.1_ASM219830v1	-	CFSAN001597
Klebsiella pneumoniae subsp. pneumoniae DSM 30104	1162296	PRJNA89609	89609	Proteobacteria	Gammaproteobacteria	5.51235	57	-	AJJI01	27	5517	5171	7/26/12	5/18/17	Contig	International Vaccine Institute	SAMN02470063	GCA_000281755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/755/GCA_000281755.1_KlePneDSM30104	23012294	DSM 30104
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.22832	28.9	-	FABL01	1312	3816	3637	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664121	GCA_900014245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/245/GCA_900014245.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.86091	47.6	-	NMSZ01	87	3615	3468	8/31/17	9/2/17	Scaffold	University of Alberta	SAMN07350483	GCA_002284265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/265/GCA_002284265.1_ASM228426v1	-	OYP6F10
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.23954	68.1	-	CIGK01	58	7457	6967	4/21/15	3/26/17	Scaffold	SC	SAMEA949388	GCA_001327335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/335/GCA_001327335.1_7915_5_32	-	78/96
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.67799	51	-	CXDJ01	361	5030	4521	7/16/15	2/24/17	Scaffold	SC	SAMEA954670	GCA_001260415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/415/GCA_001260415.1_5236_7_7	-	Sh4374_441044
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	1.96337	41.3	-	FIKA01	23	1964	1872	2/10/16	3/19/17	Contig	SC	SAMEA1316577	GCA_900063615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/615/GCA_900063615.1_7054_7_35	-	SS1032
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.00343	35.4	-	FJOL01	115	2028	1913	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888116	GCA_900073355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/355/GCA_900073355.1_SA76	-	-
Acinetobacter baumannii 25935_1	1310935	PRJNA195012	195012	Proteobacteria	Gammaproteobacteria	4.10592	39.1	-	JGAR01	117	4106	3829	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614540	GCA_000592095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/095/GCA_000592095.1_ASM59209v1	-	25935_1
Pseudomonas aeruginosa	287	PRJNA287647	287647	Proteobacteria	Gammaproteobacteria	6.87901	66	-	LFMT01	1	6533	6362	7/17/15	3/17/17	Contig	The Mayo Clinic	SAMN03787337	GCA_001086805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/805/GCA_001086805.1_ASM108680v1	26450729	BTP036
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.19834	51.6	-	FESY01	100	2578	2196	2/9/16	3/21/17	Scaffold	SC	SAMEA2673904	GCA_900032475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/475/GCA_900032475.1_14355_5_43	-	2842STDY5881096
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.70522	39	-	MUOR01	69	1683	1504	3/3/17	3/6/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187432	GCA_002012685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/685/GCA_002012685.1_ASM201268v1	28293542	CC26084
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.03245	39.6	-	COAF02	109	2207	2002	3/23/15	3/5/17	Contig	SC	SAMEA1463069	GCA_001108765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/765/GCA_001108765.2_7553_6_6	-	PT8116
Escherichia coli KTE230	1181776	PRJNA163473	163473	Proteobacteria	Gammaproteobacteria	5.2279	50.5	-	ANTV01	15	5337	4979	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974085	GCA_000351305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/305/GCA_000351305.1_Esch_coli_KTE230_V1	-	KTE230
Mycobacterium tuberculosis TKK_02_0049	1295765	PRJNA190973	190973	Terrabacteria group	Actinobacteria	4.40193	65.6	-	JMAL01	1	4282	4117	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925659	GCA_000659665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/665/GCA_000659665.1_Myco_tube_TKK_02_0049_V1	-	TKK_02_0049
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.91276	37.9	-	LSPW01	81	2909	2833	2/29/16	3/1/17	Contig	FDA/CFSAN	SAMN04414878	GCA_001577865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/865/GCA_001577865.1_CFSAN026581_02.1	-	CFSAN026581
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.84632	30.1	-	MKBQ01	94	1957	1799	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532264	GCA_001764955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/955/GCA_001764955.1_ASM176495v1	-	BCW_5122
Salmonella enterica subsp. enterica serovar Thompson str. 2010K-1863	1235460	PRJNA175833	175833	Proteobacteria	Gammaproteobacteria	4.6694	52.4	-	AMSN01	110	4753	4491	11/29/12	5/19/17	Contig	Centers for Disease Control & Prevention	SAMN02415227	GCA_000315995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/995/GCA_000315995.1_2009K-1863v1	-	2010K-1863
Staphylococcus aureus WAMC6013	1409401	PRJNA223721	223721	Terrabacteria group	Firmicutes	2.90337	32.8	-	JBMU01	10	3079	2921	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381462	GCA_000538495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/495/GCA_000538495.1_Stap_aure_WAMC6013_V1	-	WAMC6013
Staphylococcus aureus WMCA6040	1409402	PRJNA223722	223722	Terrabacteria group	Firmicutes	2.84362	32.8	-	JBMT01	11	2972	2810	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381463	GCA_000538515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/515/GCA_000538515.1_Stap_aure_WMCA6040_V1	-	WMCA6040
Salmonella enterica subsp. enterica serovar Mbandaka str. 2009K-0807	1235459	PRJNA175832	175832	Proteobacteria	Gammaproteobacteria	4.74498	52.2	-	AMRS01	53	4857	4595	11/29/12	5/19/17	Contig	Centers for Disease Control & Prevention	SAMN02415226	GCA_000316015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/015/GCA_000316015.1_2009K-0807v1	-	2009K-0807
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.72251	30.4	-	MKBR01	60	1820	1720	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532265	GCA_001764975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/975/GCA_001764975.1_ASM176497v1	-	BCW_5123
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.96738	37.9	-	LSPX01	58	3005	2921	2/29/16	3/1/17	Contig	FDA/CFSAN	SAMN04414877	GCA_001577875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/875/GCA_001577875.1_ASM157787v1	-	CFSAN026580
Mycobacterium tuberculosis TKK_02_0050	1295766	PRJNA190974	190974	Terrabacteria group	Actinobacteria	4.40243	65.6	-	JMAK01	1	4278	4110	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925660	GCA_000659685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/685/GCA_000659685.1_Myco_tube_TKK_02_0050_V1	-	TKK_02_0050
Escherichia coli KTE233	1181777	PRJNA163475	163475	Proteobacteria	Gammaproteobacteria	4.9639	50.7	-	ANTW01	3	5150	4730	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974086	GCA_000351325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/325/GCA_000351325.1_Esch_coli_KTE233_V1	-	KTE233
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.1128	39.5	-	CMSN01	76	2328	2098	3/23/15	3/11/17	Contig	SC	SAMEA1968254	GCA_001108805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/805/GCA_001108805.1_9803_8_72	-	14
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.67374	38.9	-	MUOU01	102	1651	1485	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187435	GCA_002012715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/715/GCA_002012715.1_ASM201271v1	28293542	CG22023
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.18544	51.4	-	FEVA01	87	2508	2143	2/9/16	3/21/17	Scaffold	SC	SAMEA2673972	GCA_900032485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/485/GCA_900032485.1_14355_6_80	-	2842STDY5881229
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.18541	65.7	-	CVUY01	312	7001	6641	6/24/15	3/18/17	Contig	PHE	SAMEA3374585	GCA_001180345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/345/GCA_001180345.1_P1_London_28_IMP_1_04_05	-	P1_London_28_IMP_1_04_05
Acinetobacter baumannii 25935_2	1310936	PRJNA195013	195013	Proteobacteria	Gammaproteobacteria	4.17417	39	-	JGAQ01	110	4190	3924	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614541	GCA_000592115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/115/GCA_000592115.1_ASM59211v1	-	25935_2
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.22612	35.5	-	FJPT01	231	2260	2117	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888208	GCA_900073365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/365/GCA_900073365.1_SA368	-	-
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.11208	41	-	FINM01	24	2117	2005	2/10/16	3/19/17	Contig	SC	SAMEA1566094	GCA_900063625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/625/GCA_900063625.1_8337_6_36	-	BM418a
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.69157	50.6	-	CXEE01	413	5107	4500	7/16/15	2/24/17	Scaffold	SC	SAMEA954546	GCA_001260455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/455/GCA_001260455.1_5417_2_10	-	CS20_1361401
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.05331	68.2	-	CFWF01	62	7279	6799	3/15/15	3/26/17	Scaffold	SC	SAMEA949391	GCA_001327355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/355/GCA_001327355.1_7915_5_33	-	79/96
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.90755	47.6	-	NMTG01	91	3674	3510	8/31/17	9/2/17	Scaffold	University of Alberta	SAMN07350476	GCA_002284315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/315/GCA_002284315.1_ASM228431v1	-	OYP4H06
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.22516	28.9	-	FABK01	1496	3814	3621	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664124	GCA_900014255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/255/GCA_900014255.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae subsp. pneumoniae ST258-490	1212766	PRJNA170724	170724	Proteobacteria	Gammaproteobacteria	5.70759	56.9	-	ALIS01	569	5793	5579	8/7/12	5/18/17	Contig	Tel Aviv Sourasky Medical center	SAMN01090251	GCA_000283455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/283/455/GCA_000283455.1_KlebKpneumoniae_ST258_1.0	23045514	ST258-490
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.09076	45.3	-	LHRD01	51	4896	4696	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN03945134	GCA_002198335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/335/GCA_002198335.1_ASM219833v1	-	CFSAN001600
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.09219	37.5	-	FXGT01	200	3213	2976	4/26/17	5/6/17	Scaffold	SC	SAMEA3893516	GCA_900179135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/135/GCA_900179135.1_19789_6_33	-	VREN1456
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.82876	31	-	FBLM01	109	1869	1715	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683365	GCA_001498735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/735/GCA_001498735.1_p515C	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.9017	64.2	-	CSZM01	20	4881	4571	3/24/15	3/18/17	Scaffold	SC	SAMEA1317692	GCA_001217065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/065/GCA_001217065.1_7520_7_38	-	PAP158
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15835	64.1	-	CSYX01	20	5263	5082	3/24/15	3/18/17	Scaffold	SC	SAMEA1464870	GCA_001217105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/105/GCA_001217105.1_7396_8_96	-	PAP144
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66006	31.4	-	FAYT01	23	1721	1625	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683037	GCA_001498755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/755/GCA_001498755.1_EC3748	-	n/a
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.1847	37.4	-	FXHY01	210	3321	3085	4/26/17	5/6/17	Scaffold	SC	SAMEA3893532	GCA_900179145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/145/GCA_900179145.1_19789_6_42	-	VREN1597
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.07747	45.3	-	LHRM01	51	4882	4673	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN03945143	GCA_002198355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/355/GCA_002198355.1_ASM219835v1	-	CFSAN018772
Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO	1185418	PRJEB59	169892	Proteobacteria	Gammaproteobacteria	5.39284	56.9	-	CAJM02	289	5775	5219	7/23/12	5/18/17	Contig	UNIMI	SAMEA2272049	GCA_000309505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/309/505/GCA_000309505.2_ASM30950v2	-	ST512-K30BO
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.47145	28.9	-	FABF01	350	4172	4009	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664123	GCA_900014265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/265/GCA_900014265.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.92791	47.5	-	NMTH01	76	3752	3581	8/31/17	9/2/17	Scaffold	University of Alberta	SAMN07350475	GCA_002284325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/325/GCA_002284325.1_ASM228432v1	-	OYP4G08
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.00696	68.3	-	CFNO01	68	7209	6746	3/15/15	3/27/17	Scaffold	SC	SAMEA949400	GCA_001327375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/375/GCA_001327375.1_7910_7_12	-	15-10
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.50895	50.6	-	CXCD01	438	4833	4290	7/17/15	2/24/17	Scaffold	SC	SAMEA954858	GCA_001260475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/475/GCA_001260475.1_5236_2_8	-	ShIB2004_440760
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05915	41.1	-	FINP01	24	2076	1970	2/10/16	3/19/17	Contig	SC	SAMEA1566074	GCA_900063635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/635/GCA_900063635.1_8337_6_38	-	BM436a
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.09132	35.4	-	FJPB01	157	2137	2006	9/30/16	3/21/17	Contig	INSTITUT PASTEUR	SAMEA3888142	GCA_900073375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/375/GCA_900073375.1_SA102	-	-
Acinetobacter baumannii 25935_4	1310938	PRJNA195015	195015	Proteobacteria	Gammaproteobacteria	4.03546	39.1	-	JGAP01	247	4033	3721	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614542	GCA_000592135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/135/GCA_000592135.1_ASM59213v1	-	25935_4
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.02396	65.9	-	CVWC01	414	6897	6445	6/24/15	3/18/17	Contig	PHE	SAMEA3374586	GCA_001180365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/365/GCA_001180365.1_P2_London_28_IMP_1_06_05	-	P2_London_28_IMP_1_06_05
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.21152	51.5	-	FEVF01	79	2592	2213	2/9/16	3/21/17	Scaffold	SC	SAMEA2674057	GCA_900032495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/495/GCA_900032495.1_14324_4_5	-	2842STDY5881250
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.69268	39	-	MUOV01	59	1669	1505	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187436	GCA_002012725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/725/GCA_002012725.1_ASM201272v1	28293542	CG22025
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.08501	39.7	-	CMCL01	65	2316	2095	3/21/15	3/11/17	Contig	SC	SAMEA1029316	GCA_001108825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/825/GCA_001108825.1_7004_8_80	-	SMRU2912
Escherichia coli KTE234	1181778	PRJNA163477	163477	Proteobacteria	Gammaproteobacteria	5.05923	50.6	-	ANTX01	10	5112	4734	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974087	GCA_000351345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/345/GCA_000351345.1_Esch_coli_KTE234_V1	-	KTE234
Mycobacterium tuberculosis TKK_02_0051	1295767	PRJNA190975	190975	Terrabacteria group	Actinobacteria	4.40723	65.6	-	JMAJ01	1	4281	4115	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925661	GCA_000659705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/705/GCA_000659705.1_Myco_tube_TKK_02_0051_V1	-	TKK_02_0051
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	3.07441	37.8	-	LSPV01	70	3147	3056	2/29/16	3/1/17	Contig	FDA/CFSAN	SAMN04414890	GCA_001577885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/885/GCA_001577885.1_CFSAN026593_01.1	-	CFSAN026593
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.67307	30.4	-	MKBS01	66	1758	1623	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532266	GCA_001764995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/995/GCA_001764995.1_ASM176499v1	-	BCW_5124
Salmonella enterica subsp. enterica serovar Typhimurium str. STm9	1218149	PRJNA171799	171799	Proteobacteria	Gammaproteobacteria	4.92872	52.2	-	AMEA02	88	5066	4819	11/13/12	2/26/17	Contig	University of Melbourne	SAMN02225279	GCA_000319795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/795/GCA_000319795.2_STm9.2	23792739	STm9
Staphylococcus aureus AMMC6068	1409403	PRJNA223723	223723	Terrabacteria group	Firmicutes	2.8933	32.8	-	JBMS01	35	3013	2864	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381464	GCA_000538535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/535/GCA_000538535.1_Stap_aure_AMMC6068_V1	-	AMMC6068
Staphylococcus aureus UCIM6014	1409406	PRJNA223726	223726	Terrabacteria group	Firmicutes	2.86455	32.8	-	JBMP01	45	2994	2848	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381467	GCA_000538555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/555/GCA_000538555.1_Stap_aure_UCIM6014_V1	-	UCIM6014
Salmonella enterica subsp. enterica serovar Enteritidis str. 22704	702976	PRJNA42901	42901	Proteobacteria	Gammaproteobacteria	4.66677	52.1	-	ALFD01	429	5011	4465	12/31/12	5/19/17	Contig	FDA	SAMN01041089	GCA_000328985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/328/985/GCA_000328985.1_ASM32898v1	23383127	22704
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.81584	30.3	-	MKBU01	69	1917	1758	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532268	GCA_001765035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/035/GCA_001765035.1_ASM176503v1	-	BCW_5126
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.94364	37.9	-	LSPS01	60	2983	2900	2/29/16	3/1/17	Contig	FDA/CFSAN	SAMN04414896	GCA_001577935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/935/GCA_001577935.1_CFSAN026599_01.1	-	CFSAN026599
Mycobacterium tuberculosis TKK_02_0053	1295769	PRJNA190977	190977	Terrabacteria group	Actinobacteria	4.40162	65.6	-	JMAI01	1	4278	4112	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925663	GCA_000659725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/725/GCA_000659725.1_Myco_tube_TKK_02_0053_V1	-	TKK_02_0053
Escherichia coli KTE235	1181779	PRJNA163479	163479	Proteobacteria	Gammaproteobacteria	5.34649	50.7	-	ANTY01	5	5499	5180	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974088	GCA_000351365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/365/GCA_000351365.1_Esch_coli_KTE235_V1	-	KTE235
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.14657	39.6	-	CMDM01	51	2305	2014	3/21/15	3/11/17	Contig	SC	SAMEA1028827	GCA_001108865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/865/GCA_001108865.1_7011_3_3	-	SMRU2739
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.71777	39	-	MUOS01	91	1706	1514	3/3/17	3/6/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187433	GCA_002012745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/745/GCA_002012745.1_ASM201274v1	28293542	CC26093
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.1285	51.8	-	FEWP01	88	2487	2136	2/9/16	3/21/17	Scaffold	SC	SAMEA2674305	GCA_900032505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/505/GCA_900032505.1_14555_6_76	-	2842STDY5881513
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.12081	65.8	-	CVVV01	287	6921	6590	6/24/15	3/18/17	Contig	PHE	SAMEA3374587	GCA_001180385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/385/GCA_001180385.1_P3_North_West_16_VIM_2_07_06	-	P3_North_West_16_VIM_2_07_06
Acinetobacter baumannii 25935_5	1310939	PRJNA195016	195016	Proteobacteria	Gammaproteobacteria	4.00241	39	-	JGAO01	224	3991	3696	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614543	GCA_000592155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/155/GCA_000592155.1_ASM59215v1	-	25935_5
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.08946	35.4	-	FJOY01	163	2137	2009	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888143	GCA_900073385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/385/GCA_900073385.1_SA103	-	-
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04657	41.2	-	FIPF01	22	2047	1935	2/10/16	3/19/17	Contig	SC	SAMEA1566166	GCA_900063645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/645/GCA_900063645.1_8337_6_80	-	EN652
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.6497	50.7	-	CXIS01	368	5247	4463	7/16/15	2/24/17	Scaffold	SC	SAMEA2003386	GCA_001260495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/495/GCA_001260495.1_8289_7_81	-	86283
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.06625	68.1	-	CIAY01	82	7382	6899	4/21/15	3/26/17	Scaffold	SC	SAMEA949403	GCA_001327395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/395/GCA_001327395.1_7910_7_29	-	708a
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.92971	47.6	-	NMTI01	90	3727	3548	8/31/17	9/2/17	Scaffold	University of Alberta	SAMN07350474	GCA_002284365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/365/GCA_002284365.1_ASM228436v1	-	OYP4B01
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.26752	28.7	-	FADG01	759	3971	3812	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664169	GCA_900014275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/275/GCA_900014275.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO	1185420	PRJEB548	179055	Proteobacteria	Gammaproteobacteria	5.66371	57.1	-	CANS01	168	5938	5457	10/26/12	5/18/17	Contig	UNIMI	SAMEA2272030	GCA_000313365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/365/GCA_000313365.1_ASM31336v1	-	ST258-K28BO
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.09005	45.3	-	LHRJ01	55	4907	4694	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN03945140	GCA_002198375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/375/GCA_002198375.1_ASM219837v1	-	CFSAN018769
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.18792	37.4	-	FXIB01	209	3320	3086	4/26/17	5/6/17	Scaffold	SC	SAMEA3893508	GCA_900179155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/155/GCA_900179155.1_19789_6_29	-	VREN1374
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.77612	31.2	-	FBEW01	37	1872	1760	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683185	GCA_001498775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/775/GCA_001498775.1_SS_2279	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.97142	64.2	-	CSWS01	24	4937	4809	3/24/15	3/18/17	Scaffold	SC	SAMEA1464847	GCA_001217125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/125/GCA_001217125.1_7396_7_42	-	PAP090
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.29524	64.2	-	CSWH01	36	5335	5187	3/24/15	3/18/17	Scaffold	SC	SAMEA1464960	GCA_001217145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/145/GCA_001217145.1_7396_7_31	-	PAP079
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.64782	31.4	-	FBJY01	31	1709	1614	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683325	GCA_001498795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/795/GCA_001498795.1_H084040382a	-	n/a
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.13985	37.5	-	FXGW01	210	3270	3031	4/26/17	5/6/17	Scaffold	SC	SAMEA3893535	GCA_900179165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/165/GCA_900179165.1_19789_6_44	-	VREN1600
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.16504	45.3	-	LHRP01	180	5046	4771	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN03945146	GCA_002198395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/395/GCA_002198395.1_ASM219839v1	-	CFSAN018775
Klebsiella pneumoniae subsp. pneumoniae ST258-K26BO	1185419	PRJEB547	179062	Proteobacteria	Gammaproteobacteria	5.52668	57.1	-	CANR01	193	5786	5308	10/26/12	5/18/17	Contig	UNIMI	SAMEA2272556	GCA_000313465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/465/GCA_000313465.1_ASM31346v1	-	ST258-K26BO
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.18439	28.9	-	FAEZ01	1303	3746	3536	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664215	GCA_900014285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/285/GCA_900014285.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	4.06838	47.4	-	NMTN01	68	3857	3660	8/31/17	9/2/17	Scaffold	University of Alberta	SAMN07350469	GCA_002284395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/395/GCA_002284395.1_ASM228439v1	-	OYP2A12
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.12694	68.2	-	CGFB01	71	7323	6817	3/15/15	4/10/17	Scaffold	SC	SAMEA949412	GCA_001327415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/415/GCA_001327415.1_7910_7_32	-	BRI
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.77287	50.7	-	CWWA01	381	5340	4560	7/17/15	2/24/17	Scaffold	SC	SAMEA3345096	GCA_001260515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/515/GCA_001260515.1_Sg_201403956_CACGAT_L001	-	201403956_1
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.1785	40.9	-	FIPX01	30	2175	2063	2/10/16	3/19/17	Contig	SC	SAMEA1566121	GCA_900063655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/655/GCA_900063655.1_8525_5_37	-	SS32
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.24778	35.5	-	FJQC01	222	2299	2135	9/30/16	3/21/17	Contig	INSTITUT PASTEUR	SAMEA3888103	GCA_900073395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/395/GCA_900073395.1_SA52	-	-
Acinetobacter baumannii 25935_6	1310940	PRJNA195017	195017	Proteobacteria	Gammaproteobacteria	4.07115	39.2	-	JGAN01	107	4039	3772	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614544	GCA_000592175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/175/GCA_000592175.1_ASM59217v1	-	25935_6
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.16125	65.7	-	CVWA01	359	6931	6633	6/23/15	3/18/17	Contig	PHE	SAMEA3374588	GCA_001180405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/405/GCA_001180405.1_P4_London_1_VIM_2_10_07	-	P4_London_1_VIM_2_10_07
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16955	51.6	-	FEXJ01	76	2507	2172	2/9/16	3/19/17	Scaffold	SC	SAMEA2674395	GCA_900032515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/515/GCA_900032515.1_14324_5_58	-	2842STDY5881591
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.74348	38.9	-	MUOT01	100	1706	1531	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187434	GCA_002012755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/755/GCA_002012755.1_ASM201275v1	28293542	CC26100
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.03812	39.8	-	CLGP01	70	2235	2030	3/21/15	3/11/17	Contig	SC	SAMEA1026040	GCA_001108925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/925/GCA_001108925.1_6925_4_16	-	SMRU2152
Escherichia coli KTE236	1181780	PRJNA163481	163481	Proteobacteria	Gammaproteobacteria	5.38335	50.6	-	ANTZ01	17	5596	5221	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974089	GCA_000351385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/385/GCA_000351385.1_Esch_coli_KTE236_V1	-	KTE236
Mycobacterium tuberculosis TKK_02_0055	1295771	PRJNA190979	190979	Terrabacteria group	Actinobacteria	4.40081	65.6	-	JMAH01	7	4291	4104	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925665	GCA_000659745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/745/GCA_000659745.1_Myco_tube_TKK_02_0055_V1	-	TKK_02_0055
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.94479	37.9	-	LSPT01	63	2983	2899	2/29/16	3/1/17	Contig	FDA/CFSAN	SAMN04414895	GCA_001577945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/945/GCA_001577945.1_CFSAN026598_01.1	-	CFSAN026598
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.70345	30.4	-	MKBW01	58	1781	1651	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532270	GCA_001765075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/075/GCA_001765075.1_ASM176507v1	-	BCW_5129
Salmonella enterica subsp. enterica serovar Enteritidis str. SE30663	702978	PRJNA42905	42905	Proteobacteria	Gammaproteobacteria	4.63967	52.1	-	ALFE01	1019	5271	4412	12/31/12	5/19/17	Contig	FDA	SAMN01041090	GCA_000329005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/005/GCA_000329005.1_ASM32900v1	23383127	SE30663
Staphylococcus aureus UCIM6018	1409408	PRJNA223728	223728	Terrabacteria group	Firmicutes	2.91123	32.7	-	JBMN01	26	3089	2908	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381469	GCA_000538575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/575/GCA_000538575.1_Stap_aure_UCIM6018_V1	-	UCIM6018
Staphylococcus aureus WMCS6019	1409410	PRJNA223730	223730	Terrabacteria group	Firmicutes	2.80499	32.8	-	JBML01	15	2899	2716	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381471	GCA_000538595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/595/GCA_000538595.1_Stap_aure_WMCS6019_V1	-	WMCS6019
Salmonella enterica subsp. enterica serovar Enteritidis str. CHS44	702979	PRJNA42907	42907	Proteobacteria	Gammaproteobacteria	4.69457	52.1	-	ALFF01	120	4855	4557	12/31/12	5/19/17	Contig	FDA	SAMN01041154	GCA_000329025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/025/GCA_000329025.1_ASM32902v1	23383127	CHS44
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.77597	30.2	-	MKBX01	120	1879	1726	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532271	GCA_001765085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/085/GCA_001765085.1_ASM176508v1	-	BCW_5131
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.87558	37.9	-	LSPQ01	46	2900	2817	2/29/16	3/1/17	Contig	FDA/CFSAN	SAMN04414903	GCA_001577955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/955/GCA_001577955.1_CFSAN026607_01.1	-	CFSAN026607
Mycobacterium tuberculosis TKK_02_0056	1295772	PRJNA190980	190980	Terrabacteria group	Actinobacteria	4.39888	65.6	-	JMAG01	1	4279	4110	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925666	GCA_000659765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/765/GCA_000659765.1_Myco_tube_TKK_02_0056_V1	-	TKK_02_0056
Escherichia coli KTE237	1181781	PRJNA163483	163483	Proteobacteria	Gammaproteobacteria	5.48069	50.5	-	ANUA01	10	5558	5184	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974090	GCA_000351405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/405/GCA_000351405.1_Esch_coli_KTE237_V1	-	KTE237
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.13934	39.7	-	CMVY01	88	2304	2024	3/23/15	3/11/17	Contig	SC	SAMEA1022761	GCA_001108945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/945/GCA_001108945.1_5756_6_4	-	280
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.64402	39	-	MUOW01	65	1631	1464	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187437	GCA_002012795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/795/GCA_002012795.1_ASM201279v1	28293542	CG22087
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16046	51.6	-	FEYX01	76	2509	2163	2/9/16	3/19/17	Scaffold	SC	SAMEA2674141	GCA_900032525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/525/GCA_900032525.1_14555_5_15	-	2842STDY5881356
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.12786	65.8	-	CVWS01	736	7110	6470	6/24/15	3/18/17	Contig	PHE	SAMEA3374589	GCA_001180425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/425/GCA_001180425.1_P5_London_26_VIM_2_01_09	-	P5_London_26_VIM_2_01_09
Acinetobacter baumannii 25935_7	1310941	PRJNA195018	195018	Proteobacteria	Gammaproteobacteria	4.09842	39.1	-	JGAM01	117	4109	3839	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614545	GCA_000592195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/195/GCA_000592195.1_ASM59219v1	-	25935_7
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.24814	35.5	-	FJQD01	224	2298	2131	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888099	GCA_900073405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/405/GCA_900073405.1_SA48	-	-
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.03701	41.2	-	FIQA01	25	2044	1933	2/10/16	4/2/17	Contig	SC	SAMEA1566107	GCA_900063665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/665/GCA_900063665.1_8525_5_39	-	SS35
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.74419	50.9	-	CXDV01	364	5135	4606	7/16/15	2/24/17	Scaffold	SC	SAMEA954594	GCA_001260535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/535/GCA_001260535.1_5417_1_12	-	19920319_1361378
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.21708	68.1	-	CGFC01	53	7458	6941	3/15/15	3/26/17	Scaffold	SC	SAMEA949415	GCA_001327435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/435/GCA_001327435.1_7910_7_33	-	E8
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.96674	47.7	-	NMTK01	55	3696	3558	8/31/17	9/2/17	Scaffold	University of Alberta	SAMN07350472	GCA_002284415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/415/GCA_002284415.1_ASM228441v1	-	OYP2E01
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.14658	28.5	-	FAKH01	370	3788	3671	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664352	GCA_900014295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/295/GCA_900014295.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae VA360	1236102	PRJNA176123	176123	Proteobacteria	Gammaproteobacteria	5.57897	57.2	-	ANGI02	210	5760	5496	12/3/12	5/18/17	Contig	Los Alamos National Laboratory	SAMN01939167	GCA_000316245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/245/GCA_000316245.2_MTE2_ImprovedAssembly	23640195	VA360
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.08981	45.3	-	LHRK01	55	4911	4686	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN03945141	GCA_002198415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/415/GCA_002198415.1_ASM219841v1	-	CFSAN018770
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.08066	37.5	-	FXGS01	139	3178	2941	4/26/17	5/6/17	Scaffold	SC	SAMEA3893641	GCA_900179175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/175/GCA_900179175.1_19789_6_173	-	VREN3306
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66428	31.3	-	FBFB01	14	1715	1631	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683193	GCA_001498835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/835/GCA_001498835.1_EC4267	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15948	64.1	-	CSWB01	12	5260	5085	3/24/15	3/18/17	Scaffold	SC	SAMEA1464842	GCA_001217165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/165/GCA_001217165.1_7396_7_26	-	PAP074
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18119	64.2	-	CSZR01	43	5195	4915	3/24/15	3/18/17	Scaffold	SC	SAMEA1317703	GCA_001217185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/185/GCA_001217185.1_7520_7_43	-	PAP163
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.72912	31.3	-	FAZS01	22	1818	1709	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683057	GCA_001498855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/855/GCA_001498855.1_H105280404	-	n/a
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.17718	37.4	-	FXHK01	206	3310	3074	4/26/17	5/6/17	Scaffold	SC	SAMEA3893547	GCA_900179185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/185/GCA_900179185.1_19789_6_51	-	VREN1628
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.07991	45.3	-	LHRN01	86	4909	4673	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN03945144	GCA_002198435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/435/GCA_002198435.1_ASM219843v1	-	CFSAN018773
Klebsiella pneumoniae JHCK1	1236101	PRJNA176122	176122	Proteobacteria	Gammaproteobacteria	6.01528	56.6	-	ANGH02	227	6207	5855	12/3/12	5/18/17	Contig	Los Alamos National Laboratory	SAMN01939166	GCA_000316265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/265/GCA_000316265.2_MTE1_ImprovedAssembly	23640195	JHCK1
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.33426	29.1	-	CZZF01	1846	3953	3690	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664063	GCA_900014405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/405/GCA_900014405.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	4.08226	47.5	-	NMTL01	135	3927	3740	8/31/17	9/2/17	Scaffold	University of Alberta	SAMN07350471	GCA_002284425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/425/GCA_002284425.1_ASM228442v1	-	OYP2D07
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.06846	68.2	-	CGHG01	64	7343	6836	3/15/15	3/26/17	Scaffold	SC	SAMEA949428	GCA_001327455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/455/GCA_001327455.1_7910_7_9	-	EY9
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.80351	50.7	-	CXKO01	387	5430	4643	7/16/15	2/24/17	Scaffold	SC	SAMEA2003441	GCA_001260555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/555/GCA_001260555.1_8290_4_45	-	102735
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.04796	41.2	-	FIGR01	48	2038	1884	2/10/16	3/19/17	Contig	SC	SAMEA1316514	GCA_900064015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/015/GCA_900064015.1_7114_5_40	-	LSS40
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.11433	35.5	-	FJPU01	171	2122	1998	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888156	GCA_900073415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/415/GCA_900073415.1_SA116	-	-
Acinetobacter baumannii 25935_8	1310942	PRJNA195019	195019	Proteobacteria	Gammaproteobacteria	4.07646	39.1	-	JGAL01	183	4046	3748	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614546	GCA_000592215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/215/GCA_000592215.1_ASM59221v1	-	25935_8
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.07665	65.9	-	CWGH01	269	6809	6514	6/23/15	3/18/17	Contig	PHE	SAMEA3374590	GCA_001180445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/445/GCA_001180445.1_E1_London_17_VIM_2_02_09	-	E1_London_17_VIM_2_02_09
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16766	51.5	-	FEZC01	96	2537	2160	2/9/16	3/21/17	Scaffold	SC	SAMEA2674153	GCA_900032535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/535/GCA_900032535.1_14555_5_19	-	2842STDY5881360
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.70616	39.1	-	MUOX01	132	1724	1525	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187438	GCA_002012805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/805/GCA_002012805.1_ASM201280v1	28293542	CG22322
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.03628	39.7	-	CKZK01	66	2247	2032	3/21/15	3/10/17	Contig	SC	SAMEA1026248	GCA_001109005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/005/GCA_001109005.1_6840_1_2	-	SMRU1754
Escherichia coli KTE47	1182654	PRJNA164851	164851	Proteobacteria	Gammaproteobacteria	4.98747	50.6	-	ANUB01	11	5153	4785	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00854606	GCA_000351425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/425/GCA_000351425.1_Esch_coli_KTE47_V1	-	KTE47
Mycobacterium tuberculosis TKK_02_0057	1295773	PRJNA190981	190981	Terrabacteria group	Actinobacteria	4.40777	65.6	-	JMAF01	1	4281	4109	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925667	GCA_000659785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/785/GCA_000659785.1_Myco_tube_TKK_02_0057_V1	-	TKK_02_0057
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.89166	38	-	LSPR01	88	2926	2845	2/29/16	3/1/17	Contig	FDA/CFSAN	SAMN04414899	GCA_001577965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/577/965/GCA_001577965.1_CFSAN026603_01.1	-	CFSAN026603
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.69433	30.3	-	MKBY01	38	1761	1635	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532272	GCA_001765115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/115/GCA_001765115.1_ASM176511v1	-	BCW_5132
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1882	882872	PRJNA51991	51991	Proteobacteria	Gammaproteobacteria	4.73153	52	-	ALFG01	40	4854	4613	12/31/12	5/19/17	Contig	FDA	SAMN01041156	GCA_000329045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/045/GCA_000329045.1_ASM32904v1	23383127	CDC_2010K_1882
Staphylococcus aureus HOAG6068	1409413	PRJNA223733	223733	Terrabacteria group	Firmicutes	2.88976	32.8	-	JBMJ01	19	3032	2867	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381474	GCA_000538615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/615/GCA_000538615.1_Stap_aure_HOAG6068_V1	-	HOAG6068
Staphylococcus aureus PLAC6017	1409414	PRJNA223734	223734	Terrabacteria group	Firmicutes	2.89483	32.7	-	JBMI01	12	3054	2892	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381475	GCA_000538635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/635/GCA_000538635.1_Stap_aure_PLAC6017_V1	-	PLAC6017
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1884	882873	PRJNA51993	51993	Proteobacteria	Gammaproteobacteria	4.73102	52	-	ALFH01	51	4867	4610	12/31/12	5/19/17	Contig	FDA	SAMN01041155	GCA_000329065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/065/GCA_000329065.1_ASM32906v1	23383127	CDC_2010K_1884
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.85897	30.1	-	MKBZ01	140	1967	1835	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532273	GCA_001765125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/125/GCA_001765125.1_ASM176512v1	-	BCW_5133
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	3.095	37.8	-	LSPP01	42	3125	3056	2/29/16	3/1/17	Contig	FDA/CFSAN	SAMN04414906	GCA_001578015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/015/GCA_001578015.1_CFSAN026611_01.1	-	CFSAN026611
Mycobacterium tuberculosis TKK_02_0058	1295774	PRJNA190982	190982	Terrabacteria group	Actinobacteria	4.4151	65.6	-	JMAE01	2	4290	4116	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925668	GCA_000659805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/805/GCA_000659805.1_Myco_tube_TKK_02_0058_V1	-	TKK_02_0058
Escherichia coli KTE49	1182656	PRJNA164855	164855	Proteobacteria	Gammaproteobacteria	5.26373	50.7	-	ANUC01	6	5415	5070	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00854608	GCA_000351445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/445/GCA_000351445.1_Esch_coli_KTE49_V1	-	KTE49
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.04266	39.6	-	CMOH01	46	2260	2037	3/23/15	3/11/17	Contig	SC	SAMEA2061480	GCA_001109045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/045/GCA_001109045.1_9803_7_22	-	11A
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.66356	39	-	MUOZ01	142	1677	1489	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187440	GCA_002012815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/815/GCA_002012815.1_ASM201281v1	28293542	CG22367
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.19197	51.6	-	FEZK01	77	2557	2211	2/9/16	3/19/17	Scaffold	SC	SAMEA2674186	GCA_900032545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/545/GCA_900032545.1_14555_5_28	-	2842STDY5881369
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.02647	65.9	-	CVUZ01	309	6810	6456	6/24/15	3/18/17	Contig	PHE	SAMEA3374591	GCA_001180465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/465/GCA_001180465.1_E2_London_17_VIM_2_02_09	-	E2_London_17_VIM_2_02_09
Acinetobacter baumannii 25766_6	1310920	PRJNA194997	194997	Proteobacteria	Gammaproteobacteria	4.19079	39.2	-	JGBA01	129	4208	3896	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614531	GCA_000592235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/235/GCA_000592235.1_ASM59223v1	-	25766_6
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.22261	35.5	-	FJQA01	233	2254	2112	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888174	GCA_900073425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/425/GCA_900073425.1_SA210	-	-
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04394	41.2	-	FIOM01	24	2069	1948	2/10/16	3/19/17	Contig	SC	SAMEA1566194	GCA_900064035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/035/GCA_900064035.1_8337_6_63	-	EN191
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.54662	51.1	-	CXCK01	581	4709	3826	7/16/15	3/5/17	Scaffold	SC	SAMEA954577	GCA_001260575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/575/GCA_001260575.1_5236_2_3	-	ShIB1990_440755
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.00492	68.3	-	CFWA01	69	7206	6747	3/15/15	3/27/17	Scaffold	SC	SAMEA949437	GCA_001327475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/475/GCA_001327475.1_7910_7_6	-	SW1
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.94252	47.4	-	NMTP01	199	3791	3547	8/31/17	9/2/17	Scaffold	University of Alberta	SAMN07350467	GCA_002284455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/455/GCA_002284455.1_ASM228445v1	-	OYP1E07
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.11545	28.6	-	FAJX01	470	3759	3641	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664344	GCA_900014415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/415/GCA_900014415.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae hvKP1	1267897	PRJNA183508	183508	Proteobacteria	Gammaproteobacteria	5.36857	57.3	-	AOIZ01	272	5357	5097	2/7/13	5/18/17	Contig	University of Rochester School of Medicine and Dentistry	SAMN02471933	GCA_000338255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/338/255/GCA_000338255.1_KP1_contigs_1-272	23516199	hvKP1
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.18023	45.2	-	LHRU01	70	4982	4768	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN03945151	GCA_002198445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/445/GCA_002198445.1_ASM219844v1	-	CFSAN022334
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.17778	37.4	-	FXHE01	206	3314	3062	4/26/17	5/6/17	Scaffold	SC	SAMEA3893540	GCA_900179195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/195/GCA_900179195.1_19789_6_47	-	VREN1624
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66006	31.4	-	FAYQ01	23	1725	1624	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683044	GCA_001498895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/895/GCA_001498895.1_EC3369	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15948	64.1	-	CSWM01	18	5262	5086	3/24/15	3/18/17	Scaffold	SC	SAMEA1464855	GCA_001217225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/225/GCA_001217225.1_7396_7_33	-	PAP081
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16042	64.1	-	CSXU01	32	5274	5070	3/24/15	3/18/17	Scaffold	SC	SAMEA1464900	GCA_001217285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/285/GCA_001217285.1_7396_8_66	-	PAP114
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75086	31.2	-	FBAU01	18	1848	1747	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683082	GCA_001498915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/915/GCA_001498915.1_EC3713	-	n/a
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.04589	37.6	-	FXHB01	181	3187	2916	4/26/17	5/6/17	Scaffold	SC	SAMEA3893632	GCA_900179215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/215/GCA_900179215.1_19789_6_167	-	VREN3287
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.18533	45.2	-	LHRR01	61	5001	4773	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN03945148	GCA_002198475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/475/GCA_002198475.1_ASM219847v1	-	CFSAN022330
Klebsiella pneumoniae 700603	1276653	PRJNA184941	184941	Proteobacteria	Gammaproteobacteria	5.46166	57.7	-	AOGO01	103	5511	5237	3/26/13	5/18/17	Contig	University of North Carolina at Chapel Hill	SAMN02471908	GCA_000349245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/245/GCA_000349245.1_KP700603_01152013	23723407	700603
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.16495	28.3	-	FAKB01	402	3804	3671	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664346	GCA_900014425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/425/GCA_900014425.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.98904	47.5	-	NMTM01	50	3743	3610	8/31/17	9/2/17	Scaffold	University of Alberta	SAMN07350470	GCA_002284475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/475/GCA_002284475.1_ASM228447v1	-	OYP2C05
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	6.97543	68.3	-	CFWE01	72	7206	6722	3/15/15	3/26/17	Scaffold	SC	SAMEA949447	GCA_001327495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/495/GCA_001327495.1_7910_7_13	-	TRF661
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.65977	50.8	-	CXIQ01	373	5243	4471	7/16/15	2/24/17	Scaffold	SC	SAMEA1973282	GCA_001260635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/635/GCA_001260635.1_8289_7_76	-	85719
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.13842	41.3	-	FIIQ01	38	2171	2013	2/10/16	3/19/17	Contig	SC	SAMEA1316609	GCA_900064165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/165/GCA_900064165.1_7114_5_92	-	LSS92
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.14307	35.5	-	FJPE01	144	2175	2055	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888205	GCA_900073435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/435/GCA_900073435.1_SA323	-	-
Acinetobacter baumannii 25691_2	1310926	PRJNA195003	195003	Proteobacteria	Gammaproteobacteria	4.00626	38.9	-	JGAV01	166	3986	3716	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614536	GCA_000592255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/255/GCA_000592255.1_ASM59225v1	-	25691_2
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.11775	65.8	-	CVVB01	252	6895	6603	6/23/15	3/18/17	Contig	PHE	SAMEA3374592	GCA_001180485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/485/GCA_001180485.1_E3_London_17_VIM_2_03_09	-	E3_London_17_VIM_2_03_09
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.10848	51.8	-	FFAH01	72	2452	2123	2/9/16	3/21/17	Scaffold	SC	SAMEA2674242	GCA_900032555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/555/GCA_900032555.1_14555_5_51	-	2842STDY5881392
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.69914	39	-	MUOY01	141	1681	1511	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187439	GCA_002012855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/855/GCA_002012855.1_ASM201285v1	28293542	CG22366
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12775	39.5	-	CKUS01	66	2344	2102	3/21/15	3/11/17	Contig	SC	SAMEA1025791	GCA_001109065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/065/GCA_001109065.1_6823_3_1	-	SMRU1897
Escherichia coli KTE51	1182658	PRJNA164859	164859	Proteobacteria	Gammaproteobacteria	5.2768	50.7	-	ANUD01	29	5452	4999	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00854610	GCA_000351465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/465/GCA_000351465.1_Esch_coli_KTE51_V1	-	KTE51
Mycobacterium tuberculosis TKK_02_0059	1295775	PRJNA190983	190983	Terrabacteria group	Actinobacteria	4.4101	65.6	-	JMAD01	3	4282	4109	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925669	GCA_000659825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/825/GCA_000659825.1_Myco_tube_TKK_02_0059_V1	-	TKK_02_0059
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	3.03979	37.8	-	LSPO01	58	3118	3043	2/29/16	3/1/17	Contig	FDA/CFSAN	SAMN04414907	GCA_001578025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/025/GCA_001578025.1_ASM157802v1	-	CFSAN026612
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.7761	30.4	-	MKCA01	105	1887	1746	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532274	GCA_001765155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/155/GCA_001765155.1_ASM176515v1	-	BCW_5135
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1594	882874	PRJNA51995	51995	Proteobacteria	Gammaproteobacteria	4.72988	52	-	ALFI01	51	4853	4608	12/31/12	5/19/17	Contig	FDA	SAMN01041176	GCA_000329085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/085/GCA_000329085.1_ASM32908v1	23383127	CDC_2010K_1594
Staphylococcus aureus SJUD6086	1409417	PRJNA223737	223737	Terrabacteria group	Firmicutes	2.89692	32.7	-	JBMF01	13	3048	2889	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381478	GCA_000538655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/655/GCA_000538655.1_Stap_aure_SJUD6086_V1	-	SJUD6086
Staphylococcus aureus CHOC6056	1409418	PRJNA223738	223738	Terrabacteria group	Firmicutes	2.81493	32.8	-	JBME01	24	2940	2773	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381479	GCA_000538675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/675/GCA_000538675.1_Stap_aure_CHOC6056_V1	-	CHOC6056
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1566	882875	PRJNA51997	51997	Proteobacteria	Gammaproteobacteria	4.69091	52.1	-	ALFJ01	42	4804	4559	12/31/12	5/19/17	Contig	FDA	SAMN01041160	GCA_000329105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/105/GCA_000329105.1_ASM32910v1	23383127	CDC_2010K_1566
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.78027	30.4	-	MKCB01	52	1839	1685	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532275	GCA_001765165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/165/GCA_001765165.1_ASM176516v1	-	BCW_5136
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.94673	37.8	-	LSPN01	49	2993	2920	2/29/16	3/1/17	Contig	FDA/CFSAN	SAMN04414908	GCA_001578045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/045/GCA_001578045.1_ASM157804v1	-	CFSAN026613
Mycobacterium tuberculosis TKK_02_0060	1295776	PRJNA190984	190984	Terrabacteria group	Actinobacteria	4.40593	65.6	-	JMAC01	1	4285	4115	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925670	GCA_000659845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/845/GCA_000659845.1_Myco_tube_TKK_02_0060_V1	-	TKK_02_0060
Escherichia coli KTE53	1182660	PRJNA164863	164863	Proteobacteria	Gammaproteobacteria	5.21147	50.4	-	ANUE01	15	5373	5040	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00854612	GCA_000351485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/485/GCA_000351485.1_Esch_coli_KTE53_V1	-	KTE53
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05369	39.5	-	COFH02	122	2217	2017	3/23/15	3/5/17	Contig	SC	SAMEA1462974	GCA_001109085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/085/GCA_001109085.2_7622_5_78	-	ND6028
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.78262	39.1	-	MUPB01	206	1800	1601	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187442	GCA_002012875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/875/GCA_002012875.1_ASM201287v1	28293542	CG22371
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.19351	51.6	-	FFAR01	87	2589	2199	2/9/16	3/21/17	Scaffold	SC	SAMEA2674262	GCA_900032565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/565/GCA_900032565.1_14555_5_61	-	2842STDY5881402
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.08617	65.8	-	CVUK01	195	6821	6561	6/23/15	3/18/17	Contig	PHE	SAMEA3374593	GCA_001180505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/505/GCA_001180505.1_E4_London_17_VIM_2_03_09	-	E4_London_17_VIM_2_03_09
Acinetobacter baumannii 25691_6	1310930	PRJNA195007	195007	Proteobacteria	Gammaproteobacteria	4.09793	39	-	JGAU01	115	4111	3862	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614537	GCA_000592275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/275/GCA_000592275.1_ASM59227v1	-	25691_6
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.14257	35.5	-	FJPI01	145	2174	2055	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888167	GCA_900073445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/445/GCA_900073445.1_SA195	-	-
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.28388	40.8	-	FIJD01	36	2325	2137	2/10/16	3/19/17	Contig	SC	SAMEA1316533	GCA_900064295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/295/GCA_900064295.1_7114_5_94	-	LSS94
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.72681	50.7	-	CXJM01	434	5317	4551	7/16/15	2/24/17	Scaffold	SC	SAMEA2003902	GCA_001260655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/655/GCA_001260655.1_8290_4_1	-	92353
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.07994	68.2	-	CIAV01	54	7319	6829	4/21/15	3/26/17	Scaffold	SC	SAMEA949456	GCA_001327515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/515/GCA_001327515.1_7910_7_15	-	P157/04
Vibrio cholerae	666	PRJNA281423	281423	Proteobacteria	Gammaproteobacteria	3.96967	47.4	-	NMTO01	121	3770	3613	8/31/17	9/2/17	Scaffold	University of Alberta	SAMN07350468	GCA_002284495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/495/GCA_002284495.1_ASM228449v1	-	OYP1G01
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.52694	28.9	-	FAKJ01	1054	4301	4090	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664354	GCA_900014445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/445/GCA_900014445.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae ATCC BAA-1705	1276652	PRJNA184937	184937	Proteobacteria	Gammaproteobacteria	5.65755	57.1	-	AOGQ01	168	5783	5556	3/26/13	2/21/17	Contig	University of North Carolina at Chapel Hill	SAMN02471470	GCA_000349265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/265/GCA_000349265.2_KPBAA1705_01152013	23723407	ATCC BAA-1705
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.12982	45.3	-	LHRL01	90	4953	4711	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN03945142	GCA_002198485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/485/GCA_002198485.1_ASM219848v1	-	CFSAN018771
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.05767	37.7	-	FXHM01	192	3159	2916	4/26/17	5/6/17	Scaffold	SC	SAMEA3893521	GCA_900179225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/225/GCA_900179225.1_19789_6_36	-	VREN1530
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.74711	31.2	-	FBFS01	33	1808	1709	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683210	GCA_001498935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/935/GCA_001498935.1_SS_2329	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.84936	64.2	-	CSYI01	42	4882	4732	3/24/15	3/18/17	Scaffold	SC	SAMEA1464862	GCA_001217325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/325/GCA_001217325.1_7396_8_81	-	PAP129
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.83706	64.2	-	CSXE01	60	4872	4721	3/24/15	3/18/17	Scaffold	SC	SAMEA1464886	GCA_001217365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/365/GCA_001217365.1_7396_8_50	-	PAP098
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.79347	31.2	-	FBFW01	83	1835	1692	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683213	GCA_001498955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/955/GCA_001498955.1_F15D2	-	n/a
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.05804	37.7	-	FXGN01	201	3133	2911	4/26/17	5/6/17	Scaffold	SC	SAMEA3893534	GCA_900179235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/235/GCA_900179235.1_19789_6_43	-	VREN1598
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.10951	45.3	-	LHRO01	86	4929	4714	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN03945145	GCA_002198515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/515/GCA_002198515.1_ASM219851v1	-	CFSAN018774
Klebsiella pneumoniae ATCC BAA-2146	1263871	PRJNA183348	183348	Proteobacteria	Gammaproteobacteria	5.67498	57	-	AOCV01	108	5803	5572	3/26/13	2/21/17	Contig	University of North Carolina at Chapel Hill	SAMN02471909	GCA_000349285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/285/GCA_000349285.2_G000_12282012	23723407	ATCC BAA-2146
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.11346	28.9	-	FAKL01	1820	3729	3460	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664355	GCA_900014455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/455/GCA_900014455.1_Peptoclostridium_difficile	-	-
Mycoplasma mobile 163K	267748	PRJNA10697	10697	Terrabacteria group	Tenericutes	0.777079	25	chromosome:NC_006908.1/AE017308.1	-	1	689	652	5/18/04	4/17/17	Complete Genome	Broad Institute	SAMN03081417	GCA_000008365.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/365/GCA_000008365.1_ASM836v1	15289470	163K
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.16328	68.1	-	CFVT01	56	7392	6892	3/15/15	3/27/17	Scaffold	SC	SAMEA949471	GCA_001327535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/535/GCA_001327535.1_7910_7_20	-	35
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.57605	50.9	-	CXCS01	353	4900	4375	7/16/15	2/24/17	Scaffold	SC	SAMEA954850	GCA_001260675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/675/GCA_001260675.1_5236_5_4	-	Sh54179_440880
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.08259	41.2	-	FISK01	23	2114	2004	2/10/16	3/19/17	Contig	SC	SAMEA1566151	GCA_900064305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/305/GCA_900064305.1_8337_6_87	-	FX40_1
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.00357	35.4	-	FJPA01	115	2030	1914	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888117	GCA_900073455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/455/GCA_900073455.1_SA77	-	-
Acinetobacter baumannii 25691_9	1310933	PRJNA195010	195010	Proteobacteria	Gammaproteobacteria	4.10614	39	-	JGAT01	156	4131	3823	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614538	GCA_000592295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/295/GCA_000592295.1_ASM59229v1	-	25691_9
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.0251	65.9	-	CWFP01	399	6879	6452	6/24/15	3/18/17	Contig	PHE	SAMEA3374594	GCA_001180525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/525/GCA_001180525.1_P6_East_of_England_6_IMP_1_03_09	-	P6_East_of_England_6_IMP_1_03_09
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16064	51.6	-	FFBI01	95	2495	2157	2/9/16	3/19/17	Scaffold	SC	SAMEA2674294	GCA_900032575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/575/GCA_900032575.1_14555_5_77	-	2842STDY5881418
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.72678	38.8	-	MUPC01	198	1743	1539	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187443	GCA_002012885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/885/GCA_002012885.1_ASM201288v1	28293542	CG22378
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12388	39.6	-	CNRU02	142	2318	2110	3/23/15	3/11/17	Contig	SC	SAMEA1032629	GCA_001109265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/265/GCA_001109265.2_6999_2_14	-	R34-3220
Escherichia coli KTE55	1182662	PRJNA164867	164867	Proteobacteria	Gammaproteobacteria	5.22051	50.6	-	ANUF01	11	5406	5095	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854614	GCA_000351505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/505/GCA_000351505.1_Esch_coli_KTE55_V1	-	KTE55
Mycobacterium tuberculosis TKK_02_0065	1295781	PRJNA190989	190989	Terrabacteria group	Actinobacteria	4.3989	65.6	-	JMAB01	1	4276	4110	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925675	GCA_000659865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/865/GCA_000659865.1_Myco_tube_TKK_02_0065_V1	-	TKK_02_0065
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.99471	37.9	-	LUEW01	123	3017	2927	3/8/16	3/1/17	Contig	FDA/CFSAN	SAMN04414876	GCA_001582935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/935/GCA_001582935.1_CFSAN026579_02.1	-	CFSAN026579
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.69171	30.4	-	MKCD01	42	1769	1627	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532277	GCA_001765215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/215/GCA_001765215.1_ASM176521v1	-	BCW_5140
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1580	882876	PRJNA51999	51999	Proteobacteria	Gammaproteobacteria	4.69203	52.1	-	ALFK01	37	4806	4568	12/31/12	5/19/17	Contig	FDA	SAMN01041162	GCA_000329125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/125/GCA_000329125.1_ASM32912v1	23383127	CDC_2010K_1580
Staphylococcus aureus COAS6038	1409419	PRJNA223739	223739	Terrabacteria group	Firmicutes	2.89968	32.7	-	JBMD01	12	3051	2899	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381480	GCA_000538695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/695/GCA_000538695.1_Stap_aure_COAS6038_V1	-	COAS6038
Staphylococcus aureus SJOS6095	1409421	PRJNA223741	223741	Terrabacteria group	Firmicutes	2.85945	32.8	-	JBMC01	31	3000	2820	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381482	GCA_000538715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/715/GCA_000538715.1_Stap_aure_SJOS6095_V1	-	SJOS6095
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1543	882877	PRJNA52001	52001	Proteobacteria	Gammaproteobacteria	4.69163	52.1	-	ALFL01	37	4803	4564	12/31/12	5/19/17	Contig	FDA	SAMN01041149	GCA_000329145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/145/GCA_000329145.1_ASM32914v1	23383127	CDC_2010K_1543
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.70153	30.6	-	MKCE01	73	1778	1672	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532278	GCA_001765235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/235/GCA_001765235.1_ASM176523v1	-	BCW_5141
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.97094	37.9	-	LUEY01	59	3012	2920	3/8/16	3/1/17	Contig	FDA/CFSAN	SAMN04414874	GCA_001582945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/945/GCA_001582945.1_CFSAN026577_02.1	-	CFSAN026577
Mycobacterium tuberculosis TKK_02_0066	1295782	PRJNA190990	190990	Terrabacteria group	Actinobacteria	4.42054	65.5	-	JMAA01	5	4292	4118	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925676	GCA_000659885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/885/GCA_000659885.1_Myco_tube_TKK_02_0066_V1	-	TKK_02_0066
Escherichia coli KTE56	1182663	PRJNA164869	164869	Proteobacteria	Gammaproteobacteria	4.82605	50.7	-	ANUG01	4	4926	4560	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00854615	GCA_000351525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/525/GCA_000351525.1_Esch_coli_KTE56_V1	-	KTE56
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11199	39.5	-	CMNV01	55	2341	2100	3/23/15	3/11/17	Contig	SC	SAMEA2061476	GCA_001109365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/365/GCA_001109365.1_9803_7_14	-	23F
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.65341	39	-	MUPA01	149	1666	1475	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187441	GCA_002012915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/915/GCA_002012915.1_ASM201291v1	28293542	CG22370
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12076	51.8	-	FFBJ01	85	2482	2155	2/9/16	3/19/17	Scaffold	SC	SAMEA2674298	GCA_900032585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/585/GCA_900032585.1_14555_5_79	-	2842STDY5881420
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.08275	65.8	-	CVXP01	279	6878	6547	6/23/15	3/18/17	Contig	PHE	SAMEA3374595	GCA_001180545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/545/GCA_001180545.1_P7_London_17_VIM_2_06_09	-	P7_London_17_VIM_2_06_09
Acinetobacter baumannii 25766_7	1310921	PRJNA194998	194998	Proteobacteria	Gammaproteobacteria	4.06798	39.1	-	JGAZ01	131	4042	3753	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614532	GCA_000592315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/315/GCA_000592315.1_ASM59231v1	-	25766_7
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.05319	35.5	-	FJPL01	154	2086	1967	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888075	GCA_900073465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/465/GCA_900073465.1_SA11	-	-
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.0313	41.2	-	FIIV01	25	2030	1916	2/10/16	3/19/17	Contig	SC	SAMEA1316606	GCA_900064665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/665/GCA_900064665.1_7054_7_15	-	SS1001
Shigella sonnei	624	PRJEB2460	204320	Proteobacteria	Gammaproteobacteria	4.77015	50.7	-	CXGZ01	630	5673	4576	7/16/15	2/24/17	Scaffold	SC	SAMEA1027650	GCA_001260715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/715/GCA_001260715.1_7353_1_20	-	H112700288
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.05671	68.3	-	CHFI01	60	7318	6832	4/21/15	3/27/17	Scaffold	SC	SAMEA949475	GCA_001327555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/555/GCA_001327555.1_7910_7_21	-	E0387
Vibrio cholerae CT 5369-93	675809	PRJNA40501	40501	Proteobacteria	Gammaproteobacteria	3.55731	47.6	-	ADAL01	269	3084	2871	10/23/09	11/6/13	Contig	"Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR)"	SAMN02393824	GCA_000176455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/455/GCA_000176455.1_ASM17645v1	-	CT 5369-93
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.25317	28.9	-	FAKK01	1080	3916	3696	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664356	GCA_900014465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/465/GCA_900014465.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae PR04	1279040	PRJNA185397	185397	Proteobacteria	Gammaproteobacteria	5.28	57.4	-	AOPN02	297	5357	4783	4/19/13	2/21/17	Contig	Universiti Teknologi MARA	SAMN02471434	GCA_000372625.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/625/GCA_000372625.3_KP_version_2	23950113	PR04
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.08648	45.3	-	LHRQ01	53	4910	4691	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN03945147	GCA_002198525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/525/GCA_002198525.1_ASM219852v1	-	CFSAN018777
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.14368	37.5	-	FXHQ01	205	3270	3026	4/26/17	5/6/17	Scaffold	SC	SAMEA3893527	GCA_900179245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/245/GCA_900179245.1_19789_6_40	-	VREN1534
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.82587	31.1	-	FBQV01	1	1850	1731	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683212	GCA_001498995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/995/GCA_001498995.1_M5D4	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15778	64.1	-	CSXK01	30	5266	5079	3/24/15	3/18/17	Scaffold	SC	SAMEA1464929	GCA_001217405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/405/GCA_001217405.1_7396_8_57	-	PAP105
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.83779	64.2	-	CSYO01	49	4863	4708	3/24/15	3/18/17	Scaffold	SC	SAMEA1464880	GCA_001217465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/465/GCA_001217465.1_7396_8_86	-	PAP134
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75065	31.2	-	FBCX01	25	1840	1740	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683137	GCA_001499015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/015/GCA_001499015.1_EC3928	-	n/a
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.07996	37.5	-	FXGO01	194	3182	2970	4/26/17	5/6/17	Scaffold	SC	SAMEA3893518	GCA_900179255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/255/GCA_900179255.1_19789_6_34	-	VREN1457
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.18543	45.2	-	LHRS01	58	4996	4773	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN03945149	GCA_002198555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/555/GCA_002198555.1_ASM219855v1	-	CFSAN022331
Klebsiella pneumoniae UHKPC23	1284788	PRJNA187280	187280	Proteobacteria	Gammaproteobacteria	5.50345	57.2	-	AQQA01	195	5587	5411	5/23/13	2/21/17	Contig	JCVI	SAMN02141978	GCA_000401195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/195/GCA_000401195.1_gkp2v01	24913165	UHKPC23
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.25248	28.9	-	FAKZ01	1293	3870	3719	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664367	GCA_900014475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/475/GCA_900014475.1_Peptoclostridium_difficile	-	-
Vibrio cholerae O1 str. 2011EL-1133	1124482	PRJNA73589	73589	Proteobacteria	Gammaproteobacteria	3.95758	47.5	-	AHGI01	174	-	-	12/12/11	12/18/13	Contig	Public Health Agency of Canada	SAMN00765519	GCA_000237625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/625/GCA_000237625.2_ASM23762v2	22099115	2011EL-1133
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.01967	68.3	-	CFVO01	66	7238	6757	3/15/15	3/27/17	Scaffold	SC	SAMEA949479	GCA_001327575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/575/GCA_001327575.1_7910_7_22	-	AH1
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.71478	50.7	-	CXIH01	381	5268	4542	7/16/15	2/24/17	Scaffold	SC	SAMEA2003854	GCA_001260735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/735/GCA_001260735.1_8289_7_67	-	83588
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.03168	41.2	-	FIKX01	27	2029	1923	2/10/16	3/19/17	Contig	SC	SAMEA1316617	GCA_900064675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/675/GCA_900064675.1_7054_7_56	-	SS1065
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.152	35.4	-	FJPW01	174	2194	2063	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888066	GCA_900073475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/475/GCA_900073475.1_10059	-	-
Acinetobacter baumannii 25691_1	1310925	PRJNA195002	195002	Proteobacteria	Gammaproteobacteria	4.10216	39.1	-	JGAW01	110	4109	3833	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614535	GCA_000592335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/335/GCA_000592335.1_ASM59233v1	-	25691_1
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.0608	65.9	-	CWET01	281	6857	6522	6/24/15	3/18/17	Contig	PHE	SAMEA3374596	GCA_001180565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/565/GCA_001180565.1_P8_1_South_East_10_VIM_2_07_09	-	P8_1_South_East_10_VIM_2_07_09
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12831	51.7	-	FFBO01	80	2508	2173	2/9/16	3/19/17	Scaffold	SC	SAMEA2674308	GCA_900032595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/595/GCA_900032595.1_14555_5_84	-	2842STDY5881425
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.6282	39.1	-	MUPE01	137	1630	1465	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187445	GCA_002012935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/935/GCA_002012935.1_ASM201293v1	28293542	CG22389
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.18728	39.4	-	CNVN02	192	2378	2141	3/23/15	3/5/17	Contig	SC	SAMEA1032547	GCA_001109385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/385/GCA_001109385.2_6999_7_20	-	397079
Escherichia coli KTE57	1182664	PRJNA164871	164871	Proteobacteria	Gammaproteobacteria	5.16825	50.7	-	ANUH01	12	5322	4972	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854616	GCA_000351545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/545/GCA_000351545.1_Esch_coli_KTE57_V1	-	KTE57
Mycobacterium tuberculosis TKK_02_0074	1295790	PRJNA190998	190998	Terrabacteria group	Actinobacteria	4.41206	65.6	-	JLZZ01	5	4289	4120	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925684	GCA_000659905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/905/GCA_000659905.1_Myco_tube_TKK_02_0074_V1	-	TKK_02_0074
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.96593	37.9	-	LUEX01	58	2995	2919	3/8/16	3/1/17	Contig	FDA/CFSAN	SAMN04414875	GCA_001582955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/955/GCA_001582955.1_CFSAN026578_01.1	-	CFSAN026578
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.78779	30.2	-	MKCG01	95	1880	1748	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532280	GCA_001765265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/265/GCA_001765265.1_ASM176526v1	-	BCW_5144
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1441	882878	PRJNA52003	52003	Proteobacteria	Gammaproteobacteria	4.69427	52.1	-	ALFM01	40	4811	4555	12/31/12	5/19/17	Contig	FDA	SAMN01041150	GCA_000329165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/165/GCA_000329165.1_ASM32916v1	23383127	CDC_2010K_1441
Staphylococcus aureus SJUD6087	1409422	PRJNA223742	223742	Terrabacteria group	Firmicutes	2.83155	32.7	-	JBMB01	16	2971	2805	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381483	GCA_000538735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/735/GCA_000538735.1_Stap_aure_SJUD6087_V1	-	SJUD6087
Staphylococcus aureus SMMC6067	1409423	PRJNA223743	223743	Terrabacteria group	Firmicutes	2.83989	32.8	-	JBMA01	38	2981	2804	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381484	GCA_000538755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/755/GCA_000538755.1_Stap_aure_SMMC6067_V1	-	SMMC6067
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1810	882879	PRJNA52005	52005	Proteobacteria	Gammaproteobacteria	4.72953	52	-	ALFN01	60	4861	4608	12/31/12	5/19/17	Contig	FDA	SAMN01041185	GCA_000329185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/185/GCA_000329185.1_ASM32918v1	23383127	CDC_2010K_1810
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.72158	30.2	-	MKCJ01	130	1806	1673	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532283	GCA_001765335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/335/GCA_001765335.1_ASM176533v1	-	BCW_5147
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.91391	37.9	-	LUEV01	74	2917	2833	3/8/16	3/1/17	Contig	FDA/CFSAN	SAMN04414879	GCA_001582965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/965/GCA_001582965.1_CFSAN026582_02.1	-	CFSAN026582
Mycobacterium tuberculosis TKK_02_0075	1295791	PRJNA190999	190999	Terrabacteria group	Actinobacteria	4.40523	65.6	-	JLZY01	4	4289	4116	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925685	GCA_000659925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/925/GCA_000659925.1_Myco_tube_TKK_02_0075_V1	-	TKK_02_0075
Escherichia coli KTE58	1182665	PRJNA164873	164873	Proteobacteria	Gammaproteobacteria	5.30047	50.6	-	ANUI01	7	5429	5108	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854617	GCA_000351565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/565/GCA_000351565.1_Esch_coli_KTE58_V1	-	KTE58
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08491	39.7	-	CLVT01	60	2299	2081	3/21/15	3/10/17	Contig	SC	SAMEA1026190	GCA_001109405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/405/GCA_001109405.1_6983_3_69	-	SMRU2277
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.62205	39	-	MUPF01	127	1619	1445	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187446	GCA_002012945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/945/GCA_002012945.1_ASM201294v1	28293542	CM22013
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.20182	51.6	-	FFBZ01	92	2589	2224	2/9/16	3/21/17	Scaffold	SC	SAMEA2674331	GCA_900032605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/605/GCA_900032605.1_14555_5_95	-	2842STDY5881436
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.02493	65.8	-	CWEU01	256	6802	6501	6/24/15	3/18/17	Contig	PHE	SAMEA3374597	GCA_001180585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/585/GCA_001180585.1_P9_East_of_England_6_IMP_13_08_09	-	P9_East_of_England_6_IMP_13_08_09
Acinetobacter baumannii 25766_5	1310919	PRJNA194996	194996	Proteobacteria	Gammaproteobacteria	4.14175	39.1	-	JGBB01	145	4161	3859	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614530	GCA_000592355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/355/GCA_000592355.1_ASM59235v1	-	25766_5
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.00341	35.4	-	FJOQ01	112	2028	1909	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888118	GCA_900073485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/485/GCA_900073485.1_SA78	-	-
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.0428	41.2	-	FIPW01	20	2049	1939	2/10/16	3/19/17	Contig	SC	SAMEA1566146	GCA_900064685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/685/GCA_900064685.1_8525_5_35	-	SS30
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.63521	50.5	-	CXEW01	408	5038	4417	7/16/15	2/24/17	Scaffold	SC	SAMEA954823	GCA_001260755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/755/GCA_001260755.1_5417_3_6	-	20062313_1361422
Burkholderia pseudomallei	28450	PRJNA251805	251805	Proteobacteria	Betaproteobacteria	7.11723	68.2	-	JNUQ01	167	7389	6861	4/5/16	3/28/17	Scaffold	"National Institute of Health, Portugal"	SAMN02840781	GCA_001611585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/585/GCA_001611585.1_ASM161158v1	26962474	PtBps01
Vibrio cholerae O1 str. 3569-08	1124479	PRJNA73589	73589	Proteobacteria	Gammaproteobacteria	3.95867	47.6	-	AHGO01	81	-	-	12/12/11	12/18/13	Contig	Public Health Agency of Canada	SAMN00765525	GCA_000237745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/237/745/GCA_000237745.2_ASM23774v2	22099115	3569-08
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.27775	28.9	-	FALG01	1769	3844	3660	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664370	GCA_900014485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/485/GCA_900014485.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae KP-7	1284833	PRJNA187325	187325	Proteobacteria	Gammaproteobacteria	5.67269	57.2	-	AQQD01	321	5788	5538	6/4/13	2/20/17	Contig	JCVI	SAMN02141983	GCA_000406385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/385/GCA_000406385.1_gkp47v01	24913165	KP-7
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.18876	45.2	-	LHRT01	57	4988	4769	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN03945150	GCA_002198565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/565/GCA_002198565.1_ASM219856v1	-	CFSAN022332
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.18475	37.4	-	FXHP01	213	3303	3082	4/26/17	5/6/17	Scaffold	SC	SAMEA3893503	GCA_900179265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/265/GCA_900179265.1_19789_6_27	-	VREN1371
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.8646	30.9	-	FAZL01	71	1964	1837	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683027	GCA_001499035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/035/GCA_001499035.1_H081820599a	-	n/a
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18369	64.2	-	CSYL01	41	5197	5028	3/24/15	3/18/17	Scaffold	SC	SAMEA1464947	GCA_001217525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/525/GCA_001217525.1_7396_8_82	-	PAP130
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.25297	64.2	-	CVMI01	31	5330	5168	4/10/15	3/18/17	Scaffold	SC	SAMEA1464933	GCA_001350895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/895/GCA_001350895.1_7396_8_79	-	PAP127
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68062	31.4	-	FBKU01	32	1730	1637	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683343	GCA_001499055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/055/GCA_001499055.1_H125280575	-	n/a
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.06975	37.7	-	FXHF01	195	3150	2914	4/26/17	5/6/17	Scaffold	SC	SAMEA3893555	GCA_900179285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/285/GCA_900179285.1_19789_6_55	-	VREN1741
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.18607	45.2	-	LHRV01	56	5002	4773	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN03945152	GCA_002198575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/575/GCA_002198575.1_ASM219857v1	-	CFSAN022335
Klebsiella pneumoniae UHKPC40	1284787	PRJNA187279	187279	Proteobacteria	Gammaproteobacteria	5.49016	57.2	-	AQOT01	155	5558	5385	6/4/13	2/21/17	Contig	JCVI	SAMN02142015	GCA_000406405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/405/GCA_000406405.1_gkp1v01	24913165	UHKPC40
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.23794	28.9	-	FAKY01	1155	3834	3642	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664371	GCA_900014495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/495/GCA_900014495.1_Peptoclostridium_difficile	-	-
Vibrio cholerae O1 biovar El Tor	686	PRJNA239574	239574	Proteobacteria	Gammaproteobacteria	4.1048	47.4	-	JFFW01	113	3835	3198	6/12/14	6/12/14	Contig	RARI	SAMN02666511	GCA_000705295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/295/GCA_000705295.1_V.cholerae_O1_biovar_El_Tor_str._M-1293	-	M-1293
Burkholderia pseudomallei	28450	PRJNA285704	285704	Proteobacteria	Betaproteobacteria	7.15268	68.2	-	LXDO01	388	7512	6823	1/31/17	3/29/17	Scaffold	Northern Arizona University	SAMN04208792	GCA_001980805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/980/805/GCA_001980805.1_ASM198080v1	-	577cii
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.48578	50.7	-	CXDW01	372	4794	4289	7/16/15	2/24/17	Scaffold	SC	SAMEA954631	GCA_001260775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/775/GCA_001260775.1_5417_1_3	-	20041367_1361369
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.06128	41.1	-	FIQR01	24	2057	1955	2/10/16	3/19/17	Contig	SC	SAMEA1566037	GCA_900064695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/695/GCA_900064695.1_8525_5_55	-	SS79
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.11808	35.5	-	FJQB01	243	2207	2023	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888168	GCA_900073495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/495/GCA_900073495.1_SA196	-	-
Acinetobacter baumannii 25766_9	1310923	PRJNA195000	195000	Proteobacteria	Gammaproteobacteria	4.02935	39	-	JGAY01	225	4004	3667	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614534	GCA_000592375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/375/GCA_000592375.1_ASM59237v1	-	25766_9
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.08227	65.8	-	CVVA01	167	6809	6572	6/24/15	3/18/17	Contig	PHE	SAMEA3374598	GCA_001180605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/605/GCA_001180605.1_P10_London_6_VIM_2_09_09	-	P10_London_6_VIM_2_09_09
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15857	51.5	-	FFCD01	78	2524	2166	2/9/16	3/21/17	Scaffold	SC	SAMEA2674129	GCA_900032615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/615/GCA_900032615.1_14555_6_4	-	2842STDY5881441
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.68779	38.9	-	MUPD01	153	1660	1507	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187444	GCA_002012955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/955/GCA_002012955.1_ASM201295v1	28293542	CG22385
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.06713	39.5	-	CRIU01	64	2307	2071	3/22/15	3/11/17	Contig	SC	SAMEA1025357	GCA_001109585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/585/GCA_001109585.1_6753_1_16	-	SMRU1480
Escherichia coli KTE60	1182667	PRJNA164877	164877	Proteobacteria	Gammaproteobacteria	5.07079	50.5	-	ANUJ01	20	5152	4854	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00854619	GCA_000351585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/585/GCA_000351585.1_Esch_coli_KTE60_V1	-	KTE60
Mycobacterium tuberculosis TKK_02_0076	1295792	PRJNA191000	191000	Terrabacteria group	Actinobacteria	4.40866	65.6	-	JLZX01	1	4287	4112	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925686	GCA_000659945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/945/GCA_000659945.1_Myco_tube_TKK_02_0076_V1	-	TKK_02_0076
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.90468	37.9	-	LUEU01	46	2914	2830	3/8/16	3/1/17	Contig	FDA/CFSAN	SAMN04414880	GCA_001583015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/015/GCA_001583015.1_CFSAN026583_01.1	-	CFSAN026583
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.67028	30.5	-	MKCK01	42	1728	1594	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532284	GCA_001765355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/355/GCA_001765355.1_ASM176535v1	-	BCW_5148
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1558	885380	PRJNA52371	52371	Proteobacteria	Gammaproteobacteria	4.73317	52	-	ALFO01	40	4863	4621	12/31/12	5/19/17	Contig	FDA	SAMN01041157	GCA_000329205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/205/GCA_000329205.1_ASM32920v1	23383127	CDC_2010K_1558
Staphylococcus aureus SJUD6072	1409424	PRJNA223744	223744	Terrabacteria group	Firmicutes	2.88002	32.9	-	JBLZ01	27	3021	2837	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381485	GCA_000538775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/775/GCA_000538775.1_Stap_aure_SJUD6072_V1	-	SJUD6072
Staphylococcus aureus SJUD6074	1409425	PRJNA223745	223745	Terrabacteria group	Firmicutes	2.92039	32.8	-	JBLY01	21	3049	2872	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381486	GCA_000538795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/795/GCA_000538795.1_Stap_aure_SJUD6074_V1	-	SJUD6074
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1018	885381	PRJNA52373	52373	Proteobacteria	Gammaproteobacteria	4.69399	52.1	-	ALFP01	35	4808	4566	12/31/12	5/19/17	Contig	FDA	SAMN01041164	GCA_000329225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/225/GCA_000329225.1_ASM32922v1	23383127	CDC_2010K_1018
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.68328	30.4	-	MKCM01	53	1748	1620	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532286	GCA_001765395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/395/GCA_001765395.1_ASM176539v1	-	BCW_5151
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.91604	37.9	-	LUET01	78	2927	2837	3/8/16	3/1/17	Contig	FDA/CFSAN	SAMN04414881	GCA_001583025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/025/GCA_001583025.1_CFSAN026584_01.1	-	CFSAN026584
Mycobacterium tuberculosis TKK_02_0079	1295795	PRJNA191003	191003	Terrabacteria group	Actinobacteria	4.36125	65.6	-	JLZW01	3	4246	4078	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925689	GCA_000659965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/965/GCA_000659965.1_Myco_tube_TKK_02_0079_V1	-	TKK_02_0079
Escherichia coli KTE62	1182669	PRJNA164881	164881	Proteobacteria	Gammaproteobacteria	5.14412	50.5	-	ANUK01	11	5355	5018	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00854621	GCA_000351605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/605/GCA_000351605.1_Esch_coli_KTE62_V1	-	KTE62
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.1125	39.8	-	CKYO01	51	2334	2118	3/21/15	3/4/17	Contig	SC	SAMEA1025459	GCA_001109685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/685/GCA_001109685.1_6830_3_7	-	SMRU1639
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.64068	39	-	MUPG01	147	1658	1463	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187447	GCA_002012965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/012/965/GCA_002012965.1_ASM201296v1	28293542	CM22021
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15965	51.6	-	FFCF01	76	2502	2164	2/9/16	3/19/17	Scaffold	SC	SAMEA2674135	GCA_900032625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/625/GCA_900032625.1_14555_6_6	-	2842STDY5881443
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.06419	65.8	-	CVVH01	192	6797	6547	6/24/15	3/18/17	Contig	PHE	SAMEA3374599	GCA_001180625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/625/GCA_001180625.1_P11_London_17_VIM_2_10_09	-	P11_London_17_VIM_2_10_09
Acinetobacter baumannii 25766_10	1310924	PRJNA195001	195001	Proteobacteria	Gammaproteobacteria	4.13201	39.1	-	JGAX01	153	4163	3865	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614533	GCA_000592395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/395/GCA_000592395.1_ASM59239v1	-	25766_10
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.07449	35.4	-	FJPD01	135	2114	2008	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888078	GCA_900073505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/505/GCA_900073505.1_SA26	-	-
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.08333	41.2	-	FISJ01	25	2115	2004	2/10/16	3/19/17	Contig	SC	SAMEA1566161	GCA_900064705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/705/GCA_900064705.1_8337_6_86	-	FX28_2
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.51788	50.8	-	CXAP01	336	4804	4329	7/16/15	2/24/17	Scaffold	SC	SAMEA954619	GCA_001260795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/795/GCA_001260795.1_5008_7_10	-	Sh66470_401063
Burkholderia pseudomallei	28450	PRJEB2196	203872	Proteobacteria	Betaproteobacteria	7.063	68.2	-	CWJE01	59	7283	6800	7/6/15	3/27/17	Scaffold	SC	SAMEA949461	GCA_900006245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/006/245/GCA_900006245.1_7910_7_17	-	413
Vibrio cholerae	666	PRJNA238423	238423	Proteobacteria	Gammaproteobacteria	3.95105	47.5	-	JFGR01	116	-	-	6/16/14	6/16/14	Contig	"Russian Research Antiplague Institute ""Microbe"""	SAMN02640263	GCA_000709105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/105/GCA_000709105.1_M29	-	M29
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.23904	28.9	-	FALF01	1603	3845	3620	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664373	GCA_900014505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/505/GCA_900014505.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae UHKPC09	1284810	PRJNA187302	187302	Proteobacteria	Gammaproteobacteria	5.50139	57.2	-	APVO01	205	5587	5409	6/4/13	2/21/17	Contig	JCVI	SAMN02141973	GCA_000406425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/425/GCA_000406425.1_gkp24v01	24913165	UHKPC09
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.18184	45.2	-	LHRW01	67	4974	4775	6/19/17	6/22/17	Contig	FDA/CFSAN	SAMN03945153	GCA_002198615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/615/GCA_002198615.1_ASM219861v1	-	CFSAN022336
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.98526	37.7	-	FXHI01	156	3098	2888	4/26/17	5/6/17	Scaffold	SC	SAMEA3893652	GCA_900179295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/295/GCA_900179295.1_19789_6_179	-	VREN2769
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.77605	31.2	-	FBEK01	39	1866	1761	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683174	GCA_001499075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/075/GCA_001499075.1_SS_2325	-	n/a
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15224	64.1	-	FVAJ01	26	5217	5062	3/10/17	3/18/17	Scaffold	SC	SAMEA2259574	GCA_900130235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/235/GCA_900130235.1_11861_7_37	-	769
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16132	64.2	-	FRYT01	39	5169	5018	12/14/16	3/21/17	Scaffold	SC	SAMEA1967286	GCA_900130245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/245/GCA_900130245.1_10071_6_72	-	157
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.6506	31.4	-	FBHZ01	37	1705	1622	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683271	GCA_001499095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/095/GCA_001499095.1_EC1293	-	n/a
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.19273	37.4	-	FXHG01	164	3348	3096	4/26/17	5/6/17	Scaffold	SC	SAMEA3893637	GCA_900179305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/305/GCA_900179305.1_19789_6_171	-	VREN2171
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.26579	45.1	-	MDWP01	115	5128	4909	6/27/17	6/29/17	Contig	University of New Hampshire	SAMN05578009	GCA_002209595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/595/GCA_002209595.1_ASM220959v1	-	MAVP-A
Klebsiella pneumoniae UHKPC01	1284811	PRJNA187303	187303	Proteobacteria	Gammaproteobacteria	5.57555	57.2	-	APVP01	223	5664	5480	6/4/13	2/20/17	Contig	JCVI	SAMN02141984	GCA_000406445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/445/GCA_000406445.1_gkp25v01	24913165	UHKPC01
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.245	28.8	-	FAKW01	472	3950	3809	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664374	GCA_900014525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/525/GCA_900014525.1_Peptoclostridium_difficile	-	-
Vibrio cholerae O1 biovar El Tor	686	PRJNA235385	235385	Proteobacteria	Gammaproteobacteria	3.95777	47.5	-	JPLT01	50	-	-	7/29/14	4/8/15	Contig	"Antiplague Research Institute of Siberia and Far East, Russian Federation, Irkutsk"	SAMN02585803	GCA_000735705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/705/GCA_000735705.1_ASM73570v1	25814617	I-1263
Arsenophonus symbiont of Lipoptena fortisetosa	634113	PRJNA306001	306001	Proteobacteria	Gammaproteobacteria	0.836724	24.9	chromosome:NZ_CP013920.1/CP013920.1	-	1	677	630	1/25/16	4/16/17	Complete Genome	University of South Bohemia	SAMN04338047	GCA_001534665.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/665/GCA_001534665.1_ASM153466v1	-	CB
Shigella sonnei	624	PRJEB2460	204320	Proteobacteria	Gammaproteobacteria	4.82423	50.7	-	CXGO01	542	5680	4636	7/16/15	2/24/17	Scaffold	SC	SAMEA1027725	GCA_001260815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/815/GCA_001260815.1_7353_1_17	-	H112580301
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.16053	40.9	-	FIHW01	42	2160	1980	2/10/16	3/19/17	Contig	SC	SAMEA1316573	GCA_900064985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/985/GCA_900064985.1_7114_5_73	-	LSS73
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.06972	35.5	-	FJPG01	141	2081	1967	9/30/16	3/21/17	Contig	INSTITUT PASTEUR	SAMEA3888081	GCA_900073515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/515/GCA_900073515.1_SA30	-	-
Acinetobacter baumannii 25766_4	1310918	PRJNA194995	194995	Proteobacteria	Gammaproteobacteria	4.0945	39.2	-	JGBC01	132	4078	3800	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614529	GCA_000592415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/415/GCA_000592415.1_ASM59241v1	-	25766_4
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.17179	65.8	-	CVUP01	199	6951	6685	6/23/15	3/18/17	Contig	PHE	SAMEA3374600	GCA_001180645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/645/GCA_001180645.1_P12_London_17_VIM_2_11_09	-	P12_London_17_VIM_2_11_09
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16841	51.5	-	FFCZ01	78	2523	2160	2/9/16	3/21/17	Scaffold	SC	SAMEA2674204	GCA_900032635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/635/GCA_900032635.1_14555_6_27	-	2842STDY5881464
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.65233	39.1	-	MUPI01	236	1650	1454	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187449	GCA_002013015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/015/GCA_002013015.1_ASM201301v1	28293542	CM22315
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.13451	39.8	-	CLYS01	71	2361	2164	3/21/15	3/4/17	Contig	SC	SAMEA1029112	GCA_001109725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/725/GCA_001109725.1_6983_7_63	-	SMRU2367
Escherichia coli KTE66	1182673	PRJNA164889	164889	Proteobacteria	Gammaproteobacteria	5.1983	50.5	-	ANUL01	14	5290	4979	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854625	GCA_000351625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/625/GCA_000351625.1_Esch_coli_KTE66_V1	-	KTE66
Mycobacterium tuberculosis TKK_02_0080	1295796	PRJNA191004	191004	Terrabacteria group	Actinobacteria	4.40997	65.5	-	JLZV01	6	4299	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925690	GCA_000659985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/659/985/GCA_000659985.1_Myco_tube_TKK_02_0080_V1	-	TKK_02_0080
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.8804	37.9	-	LUES01	65	2900	2821	3/8/16	3/1/17	Contig	FDA/CFSAN	SAMN04414882	GCA_001583055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/055/GCA_001583055.1_CFSAN026585_02.1	-	CFSAN026585
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.88044	30.3	-	MKHU01	47	1964	1774	10/6/16	3/20/17	Contig	University of California at Davis	SAMN04532297	GCA_001856905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/905/GCA_001856905.1_ASM185690v1	-	BCW_5166
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1010	885382	PRJNA52375	52375	Proteobacteria	Gammaproteobacteria	4.69522	52.1	-	ALFQ01	36	4812	4564	12/31/12	5/19/17	Contig	FDA	SAMN01041165	GCA_000329245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/245/GCA_000329245.1_ASM32924v1	23383127	CDC_2010K_1010
Staphylococcus aureus WMCS6039	1409427	PRJNA223747	223747	Terrabacteria group	Firmicutes	2.89969	32.7	-	JBLX01	11	3059	2894	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381488	GCA_000538815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/815/GCA_000538815.1_Stap_aure_WMCS6039_V1	-	WMCS6039
Staphylococcus aureus SJOS6100	1409430	PRJNA223750	223750	Terrabacteria group	Firmicutes	2.85575	32.8	-	JBLU01	16	2993	2838	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381491	GCA_000538835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/835/GCA_000538835.1_Stap_aure_SJOS6100_V1	-	SJOS6100
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1729	885383	PRJNA52377	52377	Proteobacteria	Gammaproteobacteria	4.73396	52	-	ALFR01	34	4865	4623	12/31/12	5/19/17	Contig	FDA	SAMN01041167	GCA_000329265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/265/GCA_000329265.1_ASM32926v1	23383127	CDC_2010K_1729
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.71566	30.5	-	MKHV01	32	1791	1634	10/6/16	3/20/17	Contig	University of California at Davis	SAMN04532298	GCA_001856945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/945/GCA_001856945.1_ASM185694v1	-	BCW_5167
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.86014	38	-	LUER01	77	2877	2795	3/8/16	3/1/17	Contig	FDA/CFSAN	SAMN04414883	GCA_001583065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/065/GCA_001583065.1_CFSAN026586_02.1	-	CFSAN026586
Mycobacterium tuberculosis OFXR-2	1295797	PRJNA191009	191009	Terrabacteria group	Actinobacteria	4.40062	65.6	-	JLCM01	4	4293	4105	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925691	GCA_000660005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/005/GCA_000660005.1_Myco_tube_OFXR-2_V1	-	OFXR-2
Escherichia coli KTE67	1182674	PRJNA164891	164891	Proteobacteria	Gammaproteobacteria	5.02949	50.5	-	ANUM01	5	5083	4781	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854626	GCA_000351645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/645/GCA_000351645.1_Esch_coli_KTE67_V1	-	KTE67
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.07102	39.7	-	CMQZ01	48	2291	2048	3/23/15	3/4/17	Contig	SC	SAMEA2062164	GCA_001109785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/785/GCA_001109785.1_9803_8_33	-	19F
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.65989	38.9	-	MUPH01	122	1664	1492	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187448	GCA_002013035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/035/GCA_002013035.1_ASM201303v1	28293542	CM22046
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.0892	51.8	-	FFDV01	102	2391	2063	2/9/16	3/21/17	Scaffold	SC	SAMEA2674251	GCA_900032645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/645/GCA_900032645.1_14555_6_49	-	2842STDY5881486
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.08024	65.9	-	CVUL01	183	6805	6554	6/24/15	3/18/17	Contig	PHE	SAMEA3374601	GCA_001180665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/665/GCA_001180665.1_P13_London_14_VIM_2_12_09	-	P13_London_14_VIM_2_12_09
Acinetobacter baumannii 44467_5	1310979	PRJNA195057	195057	Proteobacteria	Gammaproteobacteria	4.09323	39.1	-	JGBO01	149	4107	3777	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644685	GCA_000592435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/435/GCA_000592435.1_ASM59243v1	-	44467_5
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.22731	35.5	-	FJQF01	247	2260	2114	9/30/16	3/21/17	Contig	INSTITUT PASTEUR	SAMEA3888172	GCA_900073525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/525/GCA_900073525.1_SA208	-	-
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.14982	41	-	FIHX01	36	2137	1970	2/10/16	3/19/17	Contig	SC	SAMEA1316588	GCA_900064995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/995/GCA_900064995.1_7114_5_74	-	LSS74
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.69306	50.7	-	CWYP01	380	5308	4516	7/16/15	2/24/17	Scaffold	SC	SAMEA2445719	GCA_001260835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/835/GCA_001260835.1_12971_8_35	-	H102880240
Spiroplasma litorale	216942	PRJNA253651	253651	Terrabacteria group	Tenericutes	1.22552	24.9	chromosome:NZ_CP012357.1/CP012357.1	-	1	1148	1105	8/13/15	4/16/17	Complete Genome	Academia Sinica	SAMN03938703	GCA_001267155.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/155/GCA_001267155.1_ASM126715v1	26430038	TN-1
Vibrio cholerae	666	PRJNA242443	242443	Proteobacteria	Gammaproteobacteria	4.34436	46.1	-	JIDP01	76	4005	3950	7/31/14	9/25/14	Contig	Los Alamos National Laboratory	SAMN02693882	GCA_000736955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/955/GCA_000736955.1_GFC_17	25212618	523-80
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.22599	28.9	-	FALJ01	1049	3788	3629	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664379	GCA_900014535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/535/GCA_900014535.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae UHKPC27	1284813	PRJNA187305	187305	Proteobacteria	Gammaproteobacteria	5.57168	57.2	-	APVR01	220	5661	5477	6/4/13	2/21/17	Contig	JCVI	SAMN02141968	GCA_000406465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/465/GCA_000406465.1_gkp27v01	24913165	UHKPC27
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.17587	45.2	-	MDWQ01	43	5054	4828	6/27/17	6/29/17	Contig	University of New Hampshire	SAMN05578011	GCA_002209605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/605/GCA_002209605.1_ASM220960v1	-	MAVP-P
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.185	37.4	-	FXGR01	210	3321	3088	4/26/17	5/6/17	Scaffold	SC	SAMEA3893520	GCA_900179315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/315/GCA_900179315.1_19789_6_35	-	VREN1458
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.56221	31.8	-	FBFT01	13	1566	1508	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683214	GCA_001499115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/115/GCA_001499115.1_K3D1	-	n/a
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18439	64.2	-	FRYY01	29	5190	5042	12/14/16	4/2/17	Scaffold	SC	SAMEA2070422	GCA_900130255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/255/GCA_900130255.1_10071_6_76	-	161
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.24816	64.1	-	FRYX01	19	5257	5112	12/14/16	3/21/17	Scaffold	SC	SAMEA2071247	GCA_900130315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/315/GCA_900130315.1_10625_5_63	-	148
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68328	31.3	-	FBQW01	27	1740	1631	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683503	GCA_001499135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/135/GCA_001499135.1_p495c	-	n/a
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.08388	37.5	-	FXHN01	201	3205	2974	4/26/17	5/6/17	Scaffold	SC	SAMEA3893537	GCA_900179325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/325/GCA_900179325.1_19789_6_45	-	VREN1622
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.16162	45.2	-	MDWR01	34	5017	4800	6/27/17	6/29/17	Contig	University of New Hampshire	SAMN05578012	GCA_002209625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/625/GCA_002209625.1_ASM220962v1	-	MAVP-T
Klebsiella pneumoniae 361_1301	1304920	PRJNA193164	193164	Proteobacteria	Gammaproteobacteria	5.38942	57.3	-	APWF01	148	5443	5275	6/4/13	2/21/17	Contig	JCVI	SAMN02141991	GCA_000406485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/485/GCA_000406485.1_gkp53v01	24913165	361_1301
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.20091	29.1	-	FALL01	1516	3766	3559	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664383	GCA_900014545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/545/GCA_900014545.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA254724	254724	Proteobacteria	Gammaproteobacteria	4.01799	47.5	-	JPHJ01	92	3668	2875	8/15/14	8/15/14	Contig	InDRE	SAMN02904552	GCA_000740515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/515/GCA_000740515.2_ASM74051v2	24964882	InDRE 3140
Candidatus Portiera aleyrodidarum	91844	PRJEB4469	277156	Proteobacteria	Gammaproteobacteria	0.280822	24.7	chromosome I:LN649236.1	-	1	308	268	3/4/15	3/4/15	Complete Genome	ICBIBE	SAMEA2820671	GCA_000953395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/395/GCA_000953395.1_TV-BCN.1	-	TV-BCN
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.63329	50.8	-	CXIL01	388	5175	4440	7/16/15	2/24/17	Scaffold	SC	SAMEA2035203	GCA_001260855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/855/GCA_001260855.1_8289_7_71	-	85359
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.07707	41.1	-	FIJT01	28	2082	1979	2/10/16	3/19/17	Contig	SC	SAMEA1316528	GCA_900065005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/005/GCA_900065005.1_7054_7_27	-	SS1017
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.22352	35.5	-	FJQE01	233	2257	2117	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888185	GCA_900073535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/535/GCA_900073535.1_SA233	-	-
Acinetobacter baumannii 44467_6	1310980	PRJNA195058	195058	Proteobacteria	Gammaproteobacteria	4.07427	39	-	JGBN01	176	4104	3760	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644686	GCA_000592455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/455/GCA_000592455.1_ASM59245v1	-	44467_6
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.06751	65.8	-	CVVT01	270	6852	6540	6/23/15	3/18/17	Contig	PHE	SAMEA3374602	GCA_001180685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/685/GCA_001180685.1_P14_London_17_VIM_2_01_10	-	P14_London_17_VIM_2_01_10
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.10469	51.7	-	FFED01	119	2428	2070	2/9/16	3/21/17	Scaffold	SC	SAMEA2674317	GCA_900032655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/655/GCA_900032655.1_14555_6_82	-	2842STDY5881519
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.61519	39.2	-	MUPJ01	195	1605	1435	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187450	GCA_002013045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/045/GCA_002013045.1_ASM201304v1	28293542	CM22331
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.05346	39.7	-	CKPA01	65	2254	2045	3/21/15	3/4/17	Contig	SC	SAMEA1024869	GCA_001109845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/845/GCA_001109845.1_6680_4_21	-	19F
Escherichia coli KTE72	1182679	PRJNA164901	164901	Proteobacteria	Gammaproteobacteria	5.21955	50.6	-	ANUN01	15	5369	5050	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854631	GCA_000351665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/665/GCA_000351665.1_Esch_coli_KTE72_V1	-	KTE72
Mycobacterium tuberculosis OFXR-3	1295798	PRJNA191010	191010	Terrabacteria group	Actinobacteria	4.42488	65.5	-	JLCL01	4	4295	4125	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925692	GCA_000660025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/025/GCA_000660025.1_Myco_tube_OFXR-3_V1	-	OFXR-3
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	3.0981	37.8	-	LUEQ01	279	3109	3005	3/8/16	3/1/17	Contig	FDA/CFSAN	SAMN04414884	GCA_001583095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/095/GCA_001583095.1_CFSAN026587_01.1	-	CFSAN026587
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.69554	30.4	-	MKHY01	64	1747	1643	10/6/16	3/20/17	Contig	University of California at Davis	SAMN04532301	GCA_001857015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/015/GCA_001857015.1_ASM185701v1	-	BCW_5172
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_0895	885384	PRJNA52379	52379	Proteobacteria	Gammaproteobacteria	4.73167	52	-	ALFS01	42	4863	4619	12/31/12	5/19/17	Contig	FDA	SAMN01041168	GCA_000329285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/285/GCA_000329285.1_ASM32928v1	23383127	CDC_2010K_0895
Staphylococcus aureus WMCS6038	1409431	PRJNA223751	223751	Terrabacteria group	Firmicutes	2.85838	32.8	-	JBLT01	27	3004	2834	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381492	GCA_000538855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/855/GCA_000538855.1_Stap_aure_WMCS6038_V1	-	WMCS6038
Staphylococcus aureus LPIH6021	1409432	PRJNA223752	223752	Terrabacteria group	Firmicutes	2.88198	32.7	-	JBLS01	8	3021	2857	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381493	GCA_000538875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/875/GCA_000538875.1_Stap_aure_LPIH6021_V1	-	LPIH6021
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_0899	885385	PRJNA52381	52381	Proteobacteria	Gammaproteobacteria	4.73078	52	-	ALFT01	41	4865	4623	12/31/12	5/19/17	Contig	FDA	SAMN01041171	GCA_000329305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/305/GCA_000329305.1_ASM32930v1	23383127	CDC_2010K_0899
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.65294	30.6	-	MKIB01	34	1733	1613	10/6/16	3/20/17	Contig	University of California at Davis	SAMN05563503	GCA_001857065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/065/GCA_001857065.1_ASM185706v1	-	BCW_6933
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.97694	37.8	-	LUEP01	224	2960	2861	3/8/16	3/1/17	Contig	FDA/CFSAN	SAMN04414885	GCA_001583105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/105/GCA_001583105.1_CFSAN026588_01.1	-	CFSAN026588
Mycobacterium tuberculosis OFXR-4	1295799	PRJNA191011	191011	Terrabacteria group	Actinobacteria	4.41743	65.6	-	JLCK01	8	4289	4109	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925693	GCA_000660045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/045/GCA_000660045.1_Myco_tube_OFXR-4_V1	-	OFXR-4
Escherichia coli KTE75	1182682	PRJNA164907	164907	Proteobacteria	Gammaproteobacteria	5.79783	50.6	-	ANUO01	37	6000	5596	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854634	GCA_000351685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/685/GCA_000351685.1_Esch_coli_KTE75_V1	-	KTE75
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.11292	39.8	-	CMTP01	93	2288	1990	3/22/15	3/15/17	Contig	SC	SAMEA1022806	GCA_001109945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/945/GCA_001109945.1_5737_3_11	-	202_66
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.6784	38.9	-	MUPK01	101	1669	1480	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187451	GCA_002013055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/055/GCA_002013055.1_ASM201305v1	28293542	CM22341
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.1948	51.6	-	FETM01	104	2576	2200	2/9/16	3/21/17	Scaffold	SC	SAMEA2674022	GCA_900033065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/065/GCA_900033065.1_14355_5_80	-	2842STDY5881133
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.1081	65.8	-	CVVW01	294	6907	6589	6/23/15	3/18/17	Contig	PHE	SAMEA3374603	GCA_001180705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/705/GCA_001180705.1_P15_London_17_02_10	-	P15_London_17_02_10
Acinetobacter baumannii 44467_7	1310981	PRJNA195059	195059	Proteobacteria	Gammaproteobacteria	4.06952	39.1	-	JGBM01	189	4082	3753	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644687	GCA_000592475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/475/GCA_000592475.1_ASM59247v1	-	44467_7
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.00412	35.4	-	FJPJ01	129	2032	1919	9/30/16	3/21/17	Contig	INSTITUT PASTEUR	SAMEA3888119	GCA_900073545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/545/GCA_900073545.1_SA79	-	-
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.03313	41.1	-	FIJU01	93	2095	1937	2/10/16	3/19/17	Contig	SC	SAMEA1316697	GCA_900065015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/015/GCA_900065015.1_7054_7_83	-	SS1018
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.68479	50.7	-	CWYQ01	384	5215	4507	7/16/15	2/24/17	Scaffold	SC	SAMEA2445721	GCA_001260895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/895/GCA_001260895.1_12971_8_36	-	H103160303
Burkholderia pseudomallei	28450	PRJNA288389	288389	Proteobacteria	Betaproteobacteria	7.12703	68.1201	chromosome 1:CP012094.1; chromosome 2:CP012093.1	-	2	6234	5484	8/31/15	11/5/15	Chromosome	Beijing Institute of Microbiology and Epidemiology	SAMN03799286	GCA_001275585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/585/GCA_001275585.1_ASM127558v1	-	350105
Vibrio cholerae	666	PRJNA263061	263061	Proteobacteria	Gammaproteobacteria	4.01192	47.5	-	JRQM01	90	3700	3139	11/23/14	11/23/14	Contig	RARI	SAMN03093453	GCA_000786335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/335/GCA_000786335.1_ASM78633v1	-	81
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.24047	29.1	-	FALP01	1416	3836	3615	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664384	GCA_900014555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/555/GCA_900014555.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae KP-11	1284834	PRJNA187326	187326	Proteobacteria	Gammaproteobacteria	5.71884	57.1	-	APWE01	301	5858	5595	6/4/13	2/21/17	Contig	JCVI	SAMN02141966	GCA_000406505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/505/GCA_000406505.1_gkp48v01	24913165	KP-11
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.16627	45.2	-	MDWS01	40	5039	4816	6/27/17	6/29/17	Contig	University of New Hampshire	SAMN05578010	GCA_002209665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/665/GCA_002209665.1_ASM220966v1	-	MAVP-L
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.05074	37.7	-	FXHZ01	191	3159	2903	4/26/17	5/6/17	Scaffold	SC	SAMEA3893556	GCA_900179335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/335/GCA_900179335.1_19789_6_56	-	VREN1742
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.64199	31.4	-	FAZU01	22	1698	1614	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683051	GCA_001499175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/175/GCA_001499175.1_EC3875	-	n/a
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21296	64.1	-	FVAV01	11	5324	5155	3/10/17	3/18/17	Scaffold	SC	SAMEA2070418	GCA_900130325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/325/GCA_900130325.1_10625_5_64	-	149
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18574	64.1	-	FVBW01	11	5301	5110	3/10/17	3/18/17	Scaffold	SC	SAMEA2259560	GCA_900130545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/545/GCA_900130545.1_11861_7_23	-	755
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75508	31.2	-	FBEO01	21	1833	1740	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683188	GCA_001499195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/195/GCA_001499195.1_EC5899	-	n/a
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.04072	37.7	-	FXGP01	189	3158	2915	4/26/17	5/6/17	Scaffold	SC	SAMEA3893522	GCA_900179345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/345/GCA_900179345.1_19789_6_37	-	VREN1531
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.21458	45.2	-	MDWU01	34	5098	4869	6/27/17	6/29/17	Contig	University of New Hampshire	SAMN05578013	GCA_002209675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/675/GCA_002209675.1_ASM220967v1	-	MAVP4
Klebsiella pneumoniae UHKPC81	1284812	PRJNA187304	187304	Proteobacteria	Gammaproteobacteria	5.53233	57.1	-	APVQ01	231	5514	5292	6/4/13	2/21/17	Contig	JCVI	SAMN02142028	GCA_000406525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/525/GCA_000406525.1_gkp26v01	24913165	UHKPC81
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.16116	28.7	-	FALQ01	551	3812	3690	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664389	GCA_900014575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/575/GCA_900014575.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA263047	263047	Proteobacteria	Gammaproteobacteria	4.01252	47.5	-	JRQL01	96	3718	3064	11/23/14	11/23/14	Contig	RARI	SAMN03093452	GCA_000786345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/345/GCA_000786345.1_ASM78634v1	-	3265/80
Burkholderia pseudomallei Bp22	797300	PRJNA49645	49645	Proteobacteria	Betaproteobacteria	7.12499	67.4882	chromosome I:CM001156.1; chromosome II:CM001157.1	AFBJ01	2	-	-	4/5/11	1/8/14	Chromosome	Genome Institute of Singapore	SAMN02469818	GCA_000195145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/195/145/GCA_000195145.1_Bp22_1.0	20368977	Bp22
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.73689	50.7	-	CXHY01	377	5361	4580	7/16/15	2/24/17	Scaffold	SC	SAMEA2003378	GCA_001260935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/935/GCA_001260935.1_8289_7_57	-	82064
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.04147	41.1	-	FIJW01	27	2041	1951	2/10/16	3/19/17	Contig	SC	SAMEA1316634	GCA_900065025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/025/GCA_900065025.1_7054_7_32	-	SS1027
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.15223	35.4	-	FJPS01	175	2194	2062	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888065	GCA_900073555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/555/GCA_900073555.1_10058	-	-
Acinetobacter baumannii 44467_8	1310982	PRJNA195060	195060	Proteobacteria	Gammaproteobacteria	4.04734	39	-	JGBL01	190	4067	3715	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644688	GCA_000592495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/495/GCA_000592495.1_ASM59249v1	-	44467_8
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.07909	65.8	-	CVVD01	246	6803	6547	6/24/15	3/18/17	Contig	PHE	SAMEA3374604	GCA_001180725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/725/GCA_001180725.1_P16_Lonon_17_VIM_2_02_10	-	P16_Lonon_17_VIM_2_02_10
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12278	51.7	-	FEUD01	89	2486	2167	2/9/16	3/19/17	Scaffold	SC	SAMEA2673817	GCA_900033075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/075/GCA_900033075.1_14355_6_19	-	2842STDY5881168
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.66275	39	-	MUPL01	97	1654	1470	3/3/17	3/6/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187452	GCA_002013065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/065/GCA_002013065.1_ASM201306v1	28293542	CM22346
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05203	39.6	-	COEY02	145	2201	2003	3/23/15	3/5/17	Contig	SC	SAMEA1463235	GCA_001109965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/965/GCA_001109965.2_7622_5_70	-	ND6006
Escherichia coli KTE76	1182683	PRJNA164909	164909	Proteobacteria	Gammaproteobacteria	5.39326	50.6	-	ANUP01	6	5542	5134	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00854635	GCA_000351705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/705/GCA_000351705.1_Esch_coli_KTE76_V1	-	KTE76
Mycobacterium tuberculosis OFXR-5	1295800	PRJNA191012	191012	Terrabacteria group	Actinobacteria	4.41578	65.6	-	JLCJ01	8	4299	4125	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925694	GCA_000660065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/065/GCA_000660065.1_Myco_tube_OFXR-5_V1	-	OFXR-5
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.94449	38.1	-	LUEO01	141	2959	2860	3/8/16	3/1/17	Contig	FDA/CFSAN	SAMN04414886	GCA_001583125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/125/GCA_001583125.1_CFSAN026589_02.1	-	CFSAN026589
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.66031	30.7	-	MKIC01	34	1743	1611	10/6/16	3/20/17	Contig	University of California at Davis	SAMN05563501	GCA_001857085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/085/GCA_001857085.1_ASM185708v1	-	BCW_6931
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1457	885386	PRJNA52383	52383	Proteobacteria	Gammaproteobacteria	4.69394	52.1	-	ALFU01	31	4817	4554	12/31/12	5/19/17	Contig	FDA	SAMN01041173	GCA_000329325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/325/GCA_000329325.1_ASM32932v1	23383127	CDC_2010K_1457
Staphylococcus aureus OCMM6045	1409433	PRJNA223753	223753	Terrabacteria group	Firmicutes	2.90403	32.7	-	JBLR01	9	3064	2897	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381494	GCA_000538895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/895/GCA_000538895.1_Stap_aure_OCMM6045_V1	-	OCMM6045
Staphylococcus aureus OCMM6046	1409434	PRJNA223754	223754	Terrabacteria group	Firmicutes	2.89826	32.8	-	JBLQ01	28	3050	2872	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381495	GCA_000538915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/915/GCA_000538915.1_Stap_aure_OCMM6046_V1	-	OCMM6046
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1747	885387	PRJNA52385	52385	Proteobacteria	Gammaproteobacteria	4.73223	52	-	ALFV01	44	4858	4612	12/31/12	5/19/17	Contig	FDA	SAMN01041188	GCA_000329345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/345/GCA_000329345.1_ASM32934v1	23383127	CDC_2010K_1747
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.64558	30.6	-	MKID01	38	1722	1609	10/6/16	3/20/17	Contig	University of California at Davis	SAMN05563502	GCA_001857095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/095/GCA_001857095.1_ASM185709v1	-	BCW_6932
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	3.09784	37.9	-	LUEN01	120	3173	3065	3/8/16	3/1/17	Contig	FDA/CFSAN	SAMN04414887	GCA_001583155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/155/GCA_001583155.1_CFSAN026590_02.1	-	CFSAN026590
Mycobacterium tuberculosis OFXR-7	1295801	PRJNA191013	191013	Terrabacteria group	Actinobacteria	4.41933	65.6	-	JLCH01	4	4294	4116	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925695	GCA_000660085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/085/GCA_000660085.1_Myco_tube_OFXR-7_V1	-	OFXR-7
Escherichia coli KTE77	1182684	PRJNA164911	164911	Proteobacteria	Gammaproteobacteria	4.77264	50.8	-	ANUQ01	8	4846	4610	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00854636	GCA_000351725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/725/GCA_000351725.1_Esch_coli_KTE77_V1	-	KTE77
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.09163	39.5	-	CLXG01	80	2283	2057	3/21/15	3/4/17	Contig	SC	SAMEA1028614	GCA_001110025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/025/GCA_001110025.1_6983_5_5	-	SMRU2309
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.75506	38.8	-	MUPM01	274	1747	1531	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187453	GCA_002013115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/115/GCA_002013115.1_ASM201311v1	28293542	CM22347
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11076	51.8	-	FEUF01	71	2443	2108	2/9/16	3/21/17	Scaffold	SC	SAMEA2673844	GCA_900033085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/085/GCA_900033085.1_14355_6_29	-	2842STDY5881178
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.04212	65.8	-	CVUV01	238	6818	6531	6/23/15	3/18/17	Contig	PHE	SAMEA3374605	GCA_001180745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/745/GCA_001180745.1_P17_North_West_14_VIM_2_03_10	-	P17_North_West_14_VIM_2_03_10
Acinetobacter baumannii 25681_2	1311006	PRJNA195084	195084	Proteobacteria	Gammaproteobacteria	4.13382	39.1	-	JGCI01	145	4135	3872	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644664	GCA_000592515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/515/GCA_000592515.1_ASM59251v1	-	25681_2
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.22717	35.5	-	FJPZ01	246	2256	2113	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888184	GCA_900073565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/565/GCA_900073565.1_SA232	-	-
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.07236	41.1	-	FIKO01	109	2117	1945	2/10/16	3/19/17	Contig	SC	SAMEA1316581	GCA_900065035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/035/GCA_900065035.1_7054_7_47	-	SS1051
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.78888	50.7	-	CXJW01	418	5448	4638	7/16/15	2/24/17	Scaffold	SC	SAMEA2003908	GCA_001260955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/955/GCA_001260955.1_8290_4_19	-	95780
Burkholderia pseudomallei CMS	1290418	PRJNA188492	188492	Proteobacteria	Betaproteobacteria	6.42665	67.9	-	APLH01	949	-	-	5/22/13	1/8/14	Scaffold	"Universiti Malaya, Kuala Lumpur"	SAMN02471849	GCA_000402055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/402/055/GCA_000402055.1_B.pseudomallei_CMS	-	CMS
Vibrio cholerae O1 biovar El Tor	686	PRJNA276171	276171	Proteobacteria	Gammaproteobacteria	3.89487	47.6	-	JZCB01	130	3597	3005	3/3/15	3/3/15	Contig	"Russian Research Anti-plague Institute ""Microbe"""	SAMN03371481	GCA_000939665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/665/GCA_000939665.1_ASM93966v1	-	MAK97
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.12445	28.5	-	FALT01	386	3763	3649	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664390	GCA_900014585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/585/GCA_900014585.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae VAKPC297	1284831	PRJNA187323	187323	Proteobacteria	Gammaproteobacteria	5.62453	57.1	-	APWC01	216	5697	5517	6/4/13	2/20/17	Contig	JCVI	SAMN02142050	GCA_000406545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/545/GCA_000406545.1_gkp45v01	24913165	VAKPC297
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.17844	45.2	-	MDWV01	81	5052	4829	6/27/17	6/29/17	Contig	University of New Hampshire	SAMN05578015	GCA_002209685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/685/GCA_002209685.1_ASM220968v1	-	MAVP39
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.08225	37.5	-	FXHA01	202	3197	2968	4/26/17	5/6/17	Scaffold	SC	SAMEA3893545	GCA_900179365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/365/GCA_900179365.1_19789_6_50	-	VREN1627
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66061	31.4	-	FBMM01	29	1716	1628	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683392	GCA_001499215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/215/GCA_001499215.1_CCN55	-	n/a
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.91528	64.1	-	FVBF01	16	4857	4725	3/10/17	3/18/17	Scaffold	SC	SAMEA2259562	GCA_900130565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/565/GCA_900130565.1_11861_7_25	-	757
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21189	64.1	-	FVAS01	7	5328	5155	3/10/17	3/18/17	Scaffold	SC	SAMEA2070428	GCA_900130675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/675/GCA_900130675.1_10665_3_9	-	179
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.75115	31.2	-	FBCN01	24	1846	1743	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683130	GCA_001499235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/235/GCA_001499235.1_EC5947	-	n/a
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.18453	37.4	-	FXGV01	207	3306	3084	4/26/17	5/6/17	Scaffold	SC	SAMEA3893511	GCA_900179375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/375/GCA_900179375.1_19789_6_30	-	VREN1375
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.47469	45	-	MDWX01	100	5347	5116	6/27/17	6/29/17	Contig	University of New Hampshire	SAMN05578016	GCA_002209735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/735/GCA_002209735.1_ASM220973v1	-	MAVP56
Klebsiella pneumoniae VAKPC280	1284828	PRJNA187320	187320	Proteobacteria	Gammaproteobacteria	5.36655	57.3	-	APVZ01	164	5441	5267	6/4/13	2/20/17	Contig	JCVI	SAMN02142049	GCA_000406565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/565/GCA_000406565.1_gkp42v01	24913165	VAKPC280
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.26341	28.9	-	FALW01	1058	3984	3789	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664392	GCA_900014595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/595/GCA_900014595.1_Peptoclostridium_difficile	-	-
Vibrio cholerae O1 biovar El Tor str. N16961	243277	PRJEB8346	274174	Proteobacteria	Gammaproteobacteria	4.0035	47.5	-	CDQI01	51	-	-	2/1/15	2/1/15	Contig	URMITE	SAMEA3231217	GCA_000946735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/735/GCA_000946735.1_Vibrio_cholerae_G_298_Guinea	-	G_298 Guinea
Burkholderia pseudomallei MSHR684	1435999	PRJNA231533	231533	Proteobacteria	Betaproteobacteria	7.28737	68	-	JQDC01	2	6154	6082	11/11/14	2/24/15	Scaffold	Los Alamos National Laboratory	SAMN02997351	GCA_000774685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/685/GCA_000774685.1_BPS	25676747	MSHR684
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.78877	50.7	-	CXMU01	406	5360	4616	7/16/15	2/24/17	Scaffold	SC	SAMEA2057983	GCA_001260975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/975/GCA_001260975.1_9870_6_3	-	143098
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.0914	41.1	-	FIMF01	24	2127	1996	2/10/16	3/19/17	Contig	SC	SAMEA1566202	GCA_900065055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/055/GCA_900065055.1_8337_6_2	-	BM190a
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.06646	35.4	-	FJPP01	163	2106	1986	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888141	GCA_900073575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/575/GCA_900073575.1_SA101	-	-
Acinetobacter baumannii 25681_3	1311007	PRJNA195085	195085	Proteobacteria	Gammaproteobacteria	4.08364	39	-	JGCH01	112	4078	3799	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644665	GCA_000592535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/535/GCA_000592535.1_ASM59253v1	-	25681_3
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.05067	65.8	-	CVVY01	524	6949	6444	6/24/15	3/18/17	Contig	PHE	SAMEA3374606	GCA_001180765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/765/GCA_001180765.1_P18_London_17_VIM_2_04_10	-	P18_London_17_VIM_2_04_10
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12988	51.7	-	FEVH01	81	2503	2163	2/9/16	3/19/17	Scaffold	SC	SAMEA2674058	GCA_900033095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/095/GCA_900033095.1_14324_4_6	-	2842STDY5881251
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.79928	38.9	-	MUPN01	551	1789	1517	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187454	GCA_002013135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/135/GCA_002013135.1_ASM201313v1	28293542	CM22351
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.10542	39.7	-	CPLO01	64	2356	2138	3/23/15	3/4/17	Contig	SC	SAMEA682337	GCA_001110065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/065/GCA_001110065.1_5381_1_10	-	09B02770
Escherichia coli KTE80	1182687	PRJNA164917	164917	Proteobacteria	Gammaproteobacteria	5.32954	50.7	-	ANUR01	28	5547	5231	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00854639	GCA_000351745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/745/GCA_000351745.1_Esch_coli_KTE80_V1	-	KTE80
Mycobacterium tuberculosis OFXR-10	1295802	PRJNA191014	191014	Terrabacteria group	Actinobacteria	4.41007	65.6	-	JLCE01	7	4305	4115	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925696	GCA_000660105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/105/GCA_000660105.1_Myco_tube_OFXR-10_V1	-	OFXR-10
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	3.12096	38	-	LUEM01	187	3184	3073	3/8/16	3/1/17	Contig	FDA/CFSAN	SAMN04414888	GCA_001583175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/175/GCA_001583175.1_CFSAN026591_02.1	-	CFSAN026591
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.63866	30.4	-	MOVC01	29	1708	1597	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04158368	GCA_001877095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/095/GCA_001877095.1_ASM187709v1	-	CDPHFDLB-F12M00584-a2
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1444	886716	PRJNA52495	52495	Proteobacteria	Gammaproteobacteria	4.73201	52	-	ALFX01	46	4860	4618	12/31/12	5/19/17	Contig	FDA	SAMN01041152	GCA_000329385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/385/GCA_000329385.1_ASM32938v1	23383127	CDC_2010K_1444
Staphylococcus aureus OCMM6048	1409436	PRJNA223756	223756	Terrabacteria group	Firmicutes	2.8741	32.8	-	JBLO01	21	3074	2911	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381497	GCA_000538935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/935/GCA_000538935.1_Stap_aure_OCMM6048_V1	-	OCMM6048
Staphylococcus aureus OCMM6049	1409437	PRJNA223757	223757	Terrabacteria group	Firmicutes	2.93903	32.9	-	JBLN01	31	3097	2920	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381498	GCA_000538955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/955/GCA_000538955.1_Stap_aure_OCMM6049_V1	-	OCMM6049
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1445	886717	PRJNA52497	52497	Proteobacteria	Gammaproteobacteria	4.69267	52.1	-	ALFY01	43	4805	4564	12/31/12	5/19/17	Contig	FDA	SAMN01041151	GCA_000329405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/405/GCA_000329405.1_ASM32940v1	23383127	CDC_2010K_1445
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.63808	30.4	-	MOVD01	21	1700	1596	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04158367	GCA_001877105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/105/GCA_001877105.1_ASM187710v1	-	CDPHFDLB-F12M00584-a1
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	3.08897	37.8	-	LUEL01	98	3163	3058	3/8/16	3/1/17	Contig	FDA/CFSAN	SAMN04414889	GCA_001583185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/185/GCA_001583185.1_CFSAN026592_01.1	-	CFSAN026592
Mycobacterium tuberculosis OFXR-11	1295803	PRJNA191015	191015	Terrabacteria group	Actinobacteria	4.40218	65.6	-	JLCD01	5	4290	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925697	GCA_000660125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/125/GCA_000660125.1_Myco_tube_OFXR-11_V1	-	OFXR-11
Escherichia coli KTE81	1182688	PRJNA164919	164919	Proteobacteria	Gammaproteobacteria	4.79167	50.8	-	ANUS01	8	4868	4578	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00854640	GCA_000351765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/765/GCA_000351765.1_Esch_coli_KTE81_V1	-	KTE81
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.04145	39.7	-	CMDS01	63	2247	2032	3/21/15	3/4/17	Contig	SC	SAMEA1029139	GCA_001110085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/085/GCA_001110085.1_7011_3_6	-	SMRU2742
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.68773	38.8	-	MUPO01	186	1700	1509	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187455	GCA_002013145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/145/GCA_002013145.1_ASM201314v1	28293542	CM22360
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16614	51.5	-	FEVO01	65	2513	2172	2/9/16	3/19/17	Scaffold	SC	SAMEA2674074	GCA_900033105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/105/GCA_900033105.1_14324_4_22	-	2842STDY5881267
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.44373	65.5	-	CVVU01	278	7295	6994	6/24/15	3/18/17	Contig	PHE	SAMEA3374607	GCA_001180785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/785/GCA_001180785.1_P19_London_7_VIM_2_05_10	-	P19_London_7_VIM_2_05_10
Acinetobacter baumannii 25681_5	1311009	PRJNA195087	195087	Proteobacteria	Gammaproteobacteria	4.10297	39	-	JGCG01	121	4078	3819	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644666	GCA_000592555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/555/GCA_000592555.1_ASM59255v1	-	25681_5
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.12201	35.4	-	FJPH01	134	2151	2030	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888072	GCA_900073585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/585/GCA_900073585.1_SA8	-	-
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	1.97423	41.3	-	FIMG01	23	1981	1876	2/10/16	3/19/17	Contig	SC	SAMEA1566189	GCA_900065065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/065/GCA_900065065.1_8337_6_4	-	BM197a
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.5802	50.9	-	CXCC01	364	4890	4330	7/16/15	2/24/17	Scaffold	SC	SAMEA954568	GCA_001261015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/015/GCA_001261015.1_5236_3_5	-	ShIB2493_440829
Burkholderia pseudomallei MSHR456	1435998	PRJNA231532	231532	Proteobacteria	Betaproteobacteria	7.52757	67.8	-	JQFN01	3	6513	6449	11/11/14	5/13/16	Scaffold	Los Alamos National Laboratory	SAMN02999499	GCA_000774865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/774/865/GCA_000774865.1_BPQ	25676747	MSHR456
Vibrio cholerae	666	PRJNA276886	276886	Proteobacteria	Gammaproteobacteria	3.87168	47.4	-	JZTZ01	1091	4070	2887	3/16/15	3/16/15	Contig	InDRE	SAMN03381324	GCA_000953785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/785/GCA_000953785.1_InDRE_3683	-	InDRE 3683
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.08865	28.7	-	FALU01	233	3751	3646	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664394	GCA_900014615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/615/GCA_900014615.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae VAKPC270	1284829	PRJNA187321	187321	Proteobacteria	Gammaproteobacteria	5.47293	57.2	-	APWA01	200	5573	5400	6/4/13	2/21/17	Contig	JCVI	SAMN02142044	GCA_000406585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/585/GCA_000406585.1_gkp43v01	24913165	VAKPC270
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.17697	45.2	-	MDWW01	79	5047	4831	6/27/17	6/29/17	Contig	University of New Hampshire	SAMN05578014	GCA_002209765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/765/GCA_002209765.1_ASM220976v1	-	MAVP30
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.06045	37.6	-	FXGU01	135	3162	2913	4/26/17	5/6/17	Scaffold	SC	SAMEA3893633	GCA_900179385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/385/GCA_900179385.1_19789_6_168	-	VREN3290
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.72523	31.2	-	FBGA01	29	1775	1664	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683220	GCA_001499255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/255/GCA_001499255.1_K11	-	n/a
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.06676	64.1	-	FVAM01	25	5082	4954	3/10/17	3/18/17	Scaffold	SC	SAMEA2259575	GCA_900130685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/685/GCA_900130685.1_11861_7_38	-	770
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.0665	64.1	-	FRYR01	22	5081	4956	12/14/16	3/21/17	Scaffold	SC	SAMEA2259576	GCA_900130695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/695/GCA_900130695.1_11861_7_39	-	771
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66331	31.4	-	FBFK01	16	1715	1630	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683202	GCA_001499275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/275/GCA_001499275.1_EC4956	-	n/a
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.08276	37.5	-	FXHH01	200	3205	2974	4/26/17	5/6/17	Scaffold	SC	SAMEA3893551	GCA_900179395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/395/GCA_900179395.1_19789_6_53	-	VREN1630
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.17516	45.2	-	MDWY01	37	5050	4830	6/27/17	6/29/17	Contig	University of New Hampshire	SAMN05578017	GCA_002209775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/775/GCA_002209775.1_ASM220977v1	-	MAVP74
Klebsiella pneumoniae UHKPC24	1284815	PRJNA187307	187307	Proteobacteria	Gammaproteobacteria	5.39645	57.3	-	APVS01	129	5449	5287	6/4/13	2/20/17	Contig	JCVI	SAMN02141979	GCA_000406605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/605/GCA_000406605.1_gkp29v01	24913165	UHKPC24
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.33917	29.1	-	FALZ01	869	3989	3805	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664396	GCA_900014625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/625/GCA_900014625.1_Peptoclostridium_difficile	-	-
Vibrio cholerae O1 biovar El Tor	686	PRJNA279020	279020	Proteobacteria	Gammaproteobacteria	3.99611	47.5	-	LAKN01	119	3701	2797	3/30/15	3/30/15	Contig	RARI	SAMN03436197	GCA_000966375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/375/GCA_000966375.1_ASM96637v1	-	P18899-D
Burkholderia pseudomallei	28450	PRJNA335692	335692	Proteobacteria	Betaproteobacteria	7.7786	67	-	MKIT01	783	-	-	12/15/16	12/15/16	Scaffold	Volgograd Research Institute for Plague Control	SAMN05715376	GCA_001905265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/265/GCA_001905265.1_ASM190526v1	-	110
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.79902	50.7	-	CXNM01	389	5431	4621	7/16/15	2/24/17	Scaffold	SC	SAMEA2057336	GCA_001261055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/055/GCA_001261055.1_9870_7_10	-	144445
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.1998	40.9	-	FISW01	28	2237	2096	2/10/16	3/19/17	Contig	SC	SAMEA1566170	GCA_900065075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/075/GCA_900065075.1_8525_5_3	-	FX230
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.17217	35.4	-	FJPQ01	151	2203	2081	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888076	GCA_900073595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/595/GCA_900073595.1_SA21	-	-
Acinetobacter baumannii 25681_6	1311010	PRJNA195088	195088	Proteobacteria	Gammaproteobacteria	4.12889	39.2	-	JGCF01	142	4132	3835	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644667	GCA_000592575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/575/GCA_000592575.1_ASM59257v1	-	25681_6
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.08257	65.8	-	CVUO01	205	6834	6557	6/24/15	3/18/17	Contig	PHE	SAMEA3374608	GCA_001180805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/805/GCA_001180805.1_P20_London_17_VIM_2_05_10	-	P20_London_17_VIM_2_05_10
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.21532	51.6	-	FEVN01	96	2575	2150	2/9/16	3/21/17	Scaffold	SC	SAMEA2674075	GCA_900033115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/115/GCA_900033115.1_14324_4_23	-	2842STDY5881268
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.65851	39	-	MUPP01	183	1657	1476	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187456	GCA_002013175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/175/GCA_002013175.1_ASM201317v1	28293542	CM22368
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.13412	39.6	-	CJZJ01	177	2316	2078	3/21/15	3/4/17	Contig	SC	SAMEA974695	GCA_001110145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/145/GCA_001110145.1_6259_5_11	-	type strain: N
Escherichia coli KTE83	1182689	PRJNA164921	164921	Proteobacteria	Gammaproteobacteria	5.3515	50.7	-	ANUT01	16	5594	5291	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854641	GCA_000351785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/785/GCA_000351785.1_Esch_coli_KTE83_V1	-	KTE83
Mycobacterium tuberculosis OFXR-12	1295804	PRJNA191016	191016	Terrabacteria group	Actinobacteria	4.39313	65.6	-	JLCC01	5	4279	4099	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925698	GCA_000660145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/145/GCA_000660145.1_Myco_tube_OFXR-12_V1	-	OFXR-12
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.97374	37.9	-	LUEK01	137	2989	2907	3/8/16	3/1/17	Contig	FDA/CFSAN	SAMN04414892	GCA_001583205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/205/GCA_001583205.1_CFSAN026595_01.1	-	CFSAN026595
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.63801	30.4	-	MOVB01	21	1702	1599	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04158369	GCA_001877115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/115/GCA_001877115.1_ASM187711v1	-	CDPHFDLB-F12M00585-a1
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1559	886718	PRJNA52499	52499	Proteobacteria	Gammaproteobacteria	4.72547	52.1	-	ALFZ01	65	4850	4590	12/31/12	5/19/17	Contig	FDA	SAMN01041158	GCA_000329425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/425/GCA_000329425.1_ASM32942v1	23383127	CDC_2010K_1559
Staphylococcus aureus AMMC6070	1409438	PRJNA223758	223758	Terrabacteria group	Firmicutes	2.94531	32.7	-	JBLM01	15	3132	2960	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381499	GCA_000538975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/975/GCA_000538975.1_Stap_aure_AMMC6070_V1	-	AMMC6070
Staphylococcus aureus AMMC6071	1409439	PRJNA223759	223759	Terrabacteria group	Firmicutes	2.88746	32.7	-	JBLL01	7	3043	2880	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381500	GCA_000538995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/538/995/GCA_000538995.1_Stap_aure_AMMC6071_V1	-	AMMC6071
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1565	886719	PRJNA52501	52501	Proteobacteria	Gammaproteobacteria	4.68909	52.2	-	ALGA01	64	4814	4546	12/31/12	5/19/17	Contig	FDA	SAMN01041159	GCA_000329445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/445/GCA_000329445.1_ASM32944v1	23383127	CDC_2010K_1565
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.64486	30.6	-	MOVA01	116	1717	1569	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04158370	GCA_001877125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/125/GCA_001877125.1_ASM187712v1	-	CDPHFDLB-F12M00585-a2
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.9355	37.9	-	LUEJ01	35	2981	2901	3/8/16	3/1/17	Contig	FDA/CFSAN	SAMN04414893	GCA_001583235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/235/GCA_001583235.1_CFSAN026596_01.1	-	CFSAN026596
Mycobacterium tuberculosis OFXR-13	1295805	PRJNA191017	191017	Terrabacteria group	Actinobacteria	4.38631	65.6	-	JLCB01	6	4279	4104	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925699	GCA_000660165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/165/GCA_000660165.1_Myco_tube_OFXR-13_V1	-	OFXR-13
Escherichia coli KTE86	1182691	PRJNA164925	164925	Proteobacteria	Gammaproteobacteria	5.09771	50.6	-	ANUU01	15	5205	4870	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854643	GCA_000351805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/805/GCA_000351805.1_Esch_coli_KTE86_V1	-	KTE86
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07313	39.6	-	COET02	149	2239	2045	3/23/15	3/11/17	Contig	SC	SAMEA1462995	GCA_001110165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/165/GCA_001110165.2_7622_5_61	-	MD5096
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.70169	39	-	MUPQ01	420	1737	1463	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187457	GCA_002013185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/185/GCA_002013185.1_ASM201318v1	28293542	CM22388
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16126	51.6	-	FEWK01	82	2504	2143	2/9/16	3/21/17	Scaffold	SC	SAMEA2674263	GCA_900033125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/125/GCA_900033125.1_14555_6_55	-	2842STDY5881492
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.08714	65.8	-	CVVE01	181	6816	6562	6/24/15	3/18/17	Contig	PHE	SAMEA3374609	GCA_001180825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/825/GCA_001180825.1_P21_London_17_VIM_2_06_10	-	P21_London_17_VIM_2_06_10
Acinetobacter baumannii 25681_8	1311012	PRJNA195090	195090	Proteobacteria	Gammaproteobacteria	4.12055	39.1	-	JGCE01	130	4106	3854	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644668	GCA_000592595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/595/GCA_000592595.1_ASM59259v1	-	25681_8
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.14279	35.5	-	FJPO01	152	2177	2056	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888166	GCA_900073605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/605/GCA_900073605.1_SA194	-	-
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04178	41.2	-	FITQ01	21	2050	1941	2/10/16	3/19/17	Contig	SC	SAMEA1566176	GCA_900065095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/095/GCA_900065095.1_8525_5_24	-	SS19
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.9656	50.5	-	CXMY01	429	5649	4779	7/16/15	2/24/17	Scaffold	SC	SAMEA2057223	GCA_001261115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/115/GCA_001261115.1_9870_6_32	-	143780
Burkholderia pseudomallei DM98	441161	PRJNA19509	19509	Proteobacteria	Betaproteobacteria	6.68866	67.5	-	ABBI01	2371	-	-	6/6/07	1/8/14	Contig	NMRC	SAMN02470664	GCA_000170415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/415/GCA_000170415.1_ASM17041v1	-	DM98
Vibrio cholerae	666	PRJNA279075	279075	Proteobacteria	Gammaproteobacteria	3.98245	47.5	-	LAHM01	95	3726	3242	3/30/15	3/30/15	Contig	RARI	SAMN03436878	GCA_000966385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/385/GCA_000966385.1_ASM96638v1	-	M818
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.12375	28.6	-	FALY01	708	3778	3630	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664395	GCA_900014635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/635/GCA_900014635.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae VAKPC276	1284830	PRJNA187322	187322	Proteobacteria	Gammaproteobacteria	5.46899	57.2	-	APWB01	205	5567	5399	6/4/13	2/20/17	Contig	JCVI	SAMN02142047	GCA_000406625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/625/GCA_000406625.1_gkp44v01	24913165	VAKPC276
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.17119	45.2	-	MDWZ01	46	5048	4822	6/27/17	6/29/17	Contig	University of New Hampshire	SAMN05578018	GCA_002209785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/785/GCA_002209785.1_ASM220978v1	-	MAVP75
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.18483	37.4	-	FXIA01	205	3308	3086	4/26/17	5/6/17	Scaffold	SC	SAMEA3893507	GCA_900179405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/405/GCA_900179405.1_19789_6_28	-	VREN1373
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65912	31.4	-	FBGS01	29	1720	1630	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683240	GCA_001499295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/295/GCA_001499295.1_EC3498	-	n/a
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16359	64.1	-	FRZD01	46	5236	5073	12/14/16	3/21/17	Scaffold	SC	SAMEA2259579	GCA_900130705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/705/GCA_900130705.1_11861_7_42	-	774
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.91261	64.1	-	FVAE01	13	4970	4821	3/10/17	3/18/17	Scaffold	SC	SAMEA2259597	GCA_900130715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/715/GCA_900130715.1_11861_7_57	-	792
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.58473	31.6	-	FBNG01	26	1584	1521	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683427	GCA_001499315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/315/GCA_001499315.1_H083420694	-	n/a
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.17881	37.4	-	FXHD01	200	3316	3079	4/26/17	5/6/17	Scaffold	SC	SAMEA3893542	GCA_900179415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/415/GCA_900179415.1_19789_6_48	-	VREN1625
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.17399	45.2	-	MDXA01	40	5046	4832	6/27/17	6/30/17	Contig	University of New Hampshire	SAMN05578019	GCA_002210265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/210/265/GCA_002210265.1_ASM221026v1	-	MAVP78
Klebsiella pneumoniae VAKPC309	1284832	PRJNA187324	187324	Proteobacteria	Gammaproteobacteria	5.47388	57.2	-	APWD01	217	5589	5403	6/4/13	2/20/17	Contig	JCVI	SAMN02142051	GCA_000406645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/645/GCA_000406645.1_gkp46v01	24913165	VAKPC309
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.12499	28.5	-	FAMG01	369	3764	3648	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664404	GCA_900014655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/655/GCA_900014655.1_Peptoclostridium_difficile	-	-
Vibrio cholerae O1 biovar El Tor	686	PRJNA279011	279011	Proteobacteria	Gammaproteobacteria	4.01585	47.5	-	LAKM01	132	3713	3230	3/30/15	3/30/15	Contig	RARI	SAMN03436133	GCA_000966395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/395/GCA_000966395.1_ASM96639v1	-	P18899
Burkholderia pseudomallei B7210	441155	PRJNA19499	19499	Proteobacteria	Betaproteobacteria	6.89169	67.9	-	ABBN01	1424	-	-	6/6/07	1/8/14	Contig	NMRC	SAMN02470660	GCA_000170515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/515/GCA_000170515.1_ASM17051v1	-	B7210
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.76955	50.7	-	CWZC01	408	5356	4608	7/16/15	2/24/17	Scaffold	SC	SAMEA2445741	GCA_001261155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/155/GCA_001261155.1_12971_8_51	-	H140220307
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.1223	41	-	FIIY01	91	2175	2025	2/10/16	3/19/17	Contig	SC	SAMEA1316594	GCA_900065235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/235/GCA_900065235.1_7054_7_14	-	SS1000
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.07894	35.5	-	FJPY01	169	2090	1969	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888082	GCA_900073615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/615/GCA_900073615.1_SA31	-	-
Acinetobacter baumannii 25681_9	1311013	PRJNA195091	195091	Proteobacteria	Gammaproteobacteria	4.15073	39	-	JGCD01	140	4181	3874	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644669	GCA_000592615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/615/GCA_000592615.1_ASM59261v1	-	25681_9
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.02706	65.9	-	CVVI01	198	6728	6486	6/24/15	3/18/17	Contig	PHE	SAMEA3374610	GCA_001180845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/845/GCA_001180845.1_P22_London_17_VIM_2_06_10	-	P22_London_17_VIM_2_06_10
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.19185	51.6	-	FEWJ01	97	2537	2186	2/9/16	3/21/17	Scaffold	SC	SAMEA2674187	GCA_900033135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/135/GCA_900033135.1_14324_4_85	-	2842STDY5881330
Helicobacter pylori	210	PRJNA352848	352848	Proteobacteria	delta/epsilon subdivisions	1.58551	39.2	-	MUOB01	164	1597	1419	3/3/17	4/17/17	Scaffold	"Escuela Nacional de Ciencias Biologicas, Instituto Politecnico Nacional"	SAMN06187458	GCA_002013205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/013/205/GCA_002013205.1_ASM201320v1	28293542	CM22390
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.0529	39.5	-	CPSC01	65	2221	2013	3/23/15	3/11/17	Contig	SC	SAMEA770048	GCA_001110245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/245/GCA_001110245.1_5310_1_3	-	14/5
Escherichia coli KTE87	1182692	PRJNA164927	164927	Proteobacteria	Gammaproteobacteria	5.27278	50.5	-	ANUV01	11	5391	5016	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854644	GCA_000351825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/825/GCA_000351825.1_Esch_coli_KTE87_V1	-	KTE87
Mycobacterium tuberculosis OFXR-14	1295806	PRJNA191018	191018	Terrabacteria group	Actinobacteria	4.39828	65.6	-	JLCA01	5	4271	4121	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925700	GCA_000660185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/185/GCA_000660185.1_Myco_tube_OFXR-14_V1	-	OFXR-14
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.93744	37.9	-	LUEI01	41	2966	2900	3/8/16	3/1/17	Contig	FDA/CFSAN	SAMN04414894	GCA_001583255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/255/GCA_001583255.1_CFSAN026597_01.1	-	CFSAN026597
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.638	30.4	-	MOUY01	26	1701	1592	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04158373	GCA_001877175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/175/GCA_001877175.1_ASM187717v1	-	CDPHFDLB-F12M00589-a2
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1808	886721	PRJNA52503	52503	Proteobacteria	Gammaproteobacteria	4.73115	52	-	ALGB01	65	4881	4602	12/31/12	5/19/17	Contig	FDA	SAMN01041184	GCA_000329465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/465/GCA_000329465.1_ASM32946v1	23383127	CDC_2010K_1808
Staphylococcus aureus AMMC6072	1409440	PRJNA223760	223760	Terrabacteria group	Firmicutes	2.90038	32.7	-	JBLK01	13	3058	2895	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381501	GCA_000539015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/015/GCA_000539015.1_Stap_aure_AMMC6072_V1	-	AMMC6072
Staphylococcus aureus AMMC6074	1409442	PRJNA223762	223762	Terrabacteria group	Firmicutes	2.96917	32.9	-	JBLI01	33	3134	2948	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381503	GCA_000539035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/035/GCA_000539035.1_Stap_aure_AMMC6074_V1	-	AMMC6074
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1811	886722	PRJNA52505	52505	Proteobacteria	Gammaproteobacteria	4.73073	52	-	ALGC01	57	4864	4615	12/31/12	5/19/17	Contig	FDA	SAMN01041186	GCA_000329485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/485/GCA_000329485.1_ASM32948v1	23383127	CDC_2010K_1811
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.6977	30.4	-	MOUX01	29	1807	1701	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04531986	GCA_001877185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/185/GCA_001877185.1_ASM187718v1	-	CDPHFDLB-F12M005620b9b2a
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.90249	38	-	LUEH01	108	2927	2847	3/8/16	3/1/17	Contig	FDA/CFSAN	SAMN04414897	GCA_001583275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/275/GCA_001583275.1_CFSAN026601_01.1	-	CFSAN026601
Mycobacterium tuberculosis OFXR-15	1295807	PRJNA191019	191019	Terrabacteria group	Actinobacteria	4.40342	65.6	-	JLBZ01	9	4294	4103	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925701	GCA_000660205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/205/GCA_000660205.1_Myco_tube_OFXR-15_V1	-	OFXR-15
Escherichia coli KTE93	1182696	PRJNA164935	164935	Proteobacteria	Gammaproteobacteria	5.07707	50.6	-	ANUW01	10	5137	4812	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854648	GCA_000351845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/845/GCA_000351845.1_Esch_coli_KTE93_V1	-	KTE93
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05435	39.6	-	CNYU02	162	2256	2045	3/23/15	3/11/17	Contig	SC	SAMEA1463122	GCA_001110305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/305/GCA_001110305.2_7553_4_48	-	NP7070
Candidatus Portiera aleyrodidarum TV	1297582	PRJNA190632	190632	Proteobacteria	Gammaproteobacteria	0.280663	24.7	chromosome:CP004358.1	-	1	307	269	3/29/13	1/31/14	Complete Genome	Yale University	SAMN02604337	GCA_000349745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/745/GCA_000349745.1_ASM34974v1	-	TV
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.08635	51.8	-	FEWH01	102	2403	2059	2/9/16	3/21/17	Scaffold	SC	SAMEA2674166	GCA_900033145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/145/GCA_900033145.1_14324_4_77	-	2842STDY5881322
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.02345	65.8	-	CVUU01	233	6786	6509	6/23/15	3/18/17	Contig	PHE	SAMEA3374611	GCA_001180865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/865/GCA_001180865.1_P23_East_of_England_6_IMP_13_07_10	-	P23_East_of_England_6_IMP_13_07_10
Acinetobacter baumannii 25750_6	1310970	PRJNA195048	195048	Proteobacteria	Gammaproteobacteria	4.05947	39	-	JGCC01	175	4064	3782	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644670	GCA_000592635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/635/GCA_000592635.1_ASM59263v1	-	25750_6
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.00761	35.4	-	FJQH01	97	2029	1914	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888120	GCA_900073625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/625/GCA_900073625.1_SA80	-	-
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05059	41.2	-	FIQP01	20	2060	1949	2/10/16	3/19/17	Contig	SC	SAMEA1566028	GCA_900065245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/245/GCA_900065245.1_8525_5_56	-	SS81
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.88392	50.5	-	CWZV01	422	5473	4714	7/16/15	2/24/17	Scaffold	SC	SAMEA2445759	GCA_001261175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/175/GCA_001261175.1_12971_8_68	-	H134560190
Burkholderia pseudomallei NCTC 13177	441153	PRJNA19493	19493	Proteobacteria	Betaproteobacteria	7.12377	68	-	ABBQ01	1077	-	-	6/6/07	1/8/14	Contig	NMRC	SAMN02470668	GCA_000170575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/575/GCA_000170575.1_ASM17057v1	-	NCTC13177
Vibrio cholerae O16 str. 877-163	1263863	PRJNA182343	182343	Proteobacteria	Gammaproteobacteria	3.86484	47.2	-	LBNV01	278	3620	3147	10/22/15	10/22/15	Contig	University of Alberta	SAMN03580968	GCA_001402745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/745/GCA_001402745.1_ASM140274v1	26454015	877-163
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.24463	29.1	-	FAMY01	288	3954	3805	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664421	GCA_900014675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/675/GCA_900014675.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae UHKPC26	1284816	PRJNA187308	187308	Proteobacteria	Gammaproteobacteria	5.50279	57.2	-	APVT01	202	5590	5411	6/4/13	2/20/17	Contig	JCVI	SAMN02141967	GCA_000406665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/665/GCA_000406665.1_gkp30v01	24913165	UHKPC26
Vibrio parahaemolyticus	670	PRJNA354199	354199	Proteobacteria	Gammaproteobacteria	5.2357	45.1	-	MPPM01	37	5034	4816	7/18/17	7/21/17	Contig	University of New Hampshire	SAMN06042543	GCA_002220915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/915/GCA_002220915.1_ASM222091v1	28687650	MA561
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.94375	37.9	-	FXHV01	148	3050	2845	4/26/17	5/6/17	Scaffold	SC	SAMEA3893662	GCA_900179425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/425/GCA_900179425.1_19789_6_184	-	VREN3645
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.66084	31.4	-	FBAO01	19	1721	1629	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683068	GCA_001499355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/355/GCA_001499355.1_EC4730	-	n/a
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.07569	64.1	-	FRZE01	19	5097	4967	12/14/16	3/21/17	Scaffold	SC	SAMEA2259606	GCA_900130725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/725/GCA_900130725.1_11861_7_66	-	801
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21188	64.1	-	FVAX01	10	5328	5152	3/10/17	3/18/17	Scaffold	SC	SAMEA2071293	GCA_900130855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/855/GCA_900130855.1_10665_3_38	-	208
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.54722	31.8	-	FBAT01	16	1565	1506	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683080	GCA_001499375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/375/GCA_001499375.1_H094860392	-	n/a
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.09002	37.6	-	FXGQ01	187	3224	2963	4/26/17	5/6/17	Scaffold	SC	SAMEA3893634	GCA_900179435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/435/GCA_900179435.1_19789_6_169	-	VREN3291
Vibrio parahaemolyticus	670	PRJNA354199	354199	Proteobacteria	Gammaproteobacteria	5.21554	45.1	-	MPPN01	42	5031	4809	7/18/17	7/21/17	Contig	University of New Hampshire	SAMN06042542	GCA_002220935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/935/GCA_002220935.1_ASM222093v1	28687650	G6928
Klebsiella pneumoniae UHKPC22	1284820	PRJNA187312	187312	Proteobacteria	Gammaproteobacteria	5.60371	57.1	-	APVU01	200	5683	5501	6/4/13	2/20/17	Contig	JCVI	SAMN02141977	GCA_000406685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/685/GCA_000406685.1_gkp34v01	24913165	UHKPC22
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	3.9474	28.6	-	FANB01	1116	3555	3381	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664424	GCA_900014685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/685/GCA_900014685.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA307229	307229	Proteobacteria	Gammaproteobacteria	4.01339	47.4	-	LQBZ01	127	3720	3182	1/14/16	1/14/16	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN04376929	GCA_001515085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/085/GCA_001515085.1_ASM151508v1	-	M1399
Burkholderia pseudomallei THE	1290416	PRJNA188494	188494	Proteobacteria	Betaproteobacteria	6.00185	67.4	-	APLJ01	2115	-	-	5/22/13	1/8/14	Contig	"Universiti Malaya, Kuala Lumpur"	SAMN02471839	GCA_000401055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/055/GCA_000401055.1_B.pseudomallei_THE	-	THE
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.74391	50.6	-	CWUK01	475	5575	4473	7/16/15	2/24/17	Scaffold	SC	SAMEA3345033	GCA_001261195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/195/GCA_001261195.1_H14140035901	-	35901ss_1
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05208	41.1	-	FIQY01	22	2060	1956	2/10/16	3/19/17	Contig	SC	SAMEA1566119	GCA_900065255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/255/GCA_900065255.1_8525_5_62	-	SS97
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.14242	35.5	-	FJQQ01	170	2165	2039	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888122	GCA_900073635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/635/GCA_900073635.1_SA82	-	-
Acinetobacter baumannii 44467_10	1310984	PRJNA195062	195062	Proteobacteria	Gammaproteobacteria	4.04479	39.1	-	JGBT01	183	4039	3716	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644679	GCA_000592655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/655/GCA_000592655.1_ASM59265v1	-	44467_10
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.0828	65.8	-	CVUR01	208	6819	6562	6/23/15	3/18/17	Contig	PHE	SAMEA3374612	GCA_001180885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/885/GCA_001180885.1_P24_London_17_VIM_2_08_10	-	P24_London_17_VIM_2_08_10
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.13563	51.7	-	FEWM01	73	2506	2179	2/9/16	3/19/17	Scaffold	SC	SAMEA2674273	GCA_900033155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/155/GCA_900033155.1_14555_6_60	-	2842STDY5881497
Mycoplasma canadense	29554	PRJDB3071	259617	Terrabacteria group	Tenericutes	0.693241	24.3	chromosome:NZ_AP014631.1/AP014631.1	-	1	584	536	8/27/14	4/17/17	Complete Genome	"National Institute of Animal Health, National Agriculture and Food Research Organization"	SAMD00019276	GCA_000828855.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/855/GCA_000828855.1_ASM82885v1	25278531	HAZ360_1
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.22067	39.4	-	CMGQ01	71	2434	2195	3/22/15	3/11/17	Contig	SC	SAMEA1029347	GCA_001110345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/345/GCA_001110345.1_7038_4_23	-	SMRU2951
Escherichia coli KTE111	1182706	PRJNA164955	164955	Proteobacteria	Gammaproteobacteria	5.10239	50.7	-	ANUX01	7	5208	4846	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00854658	GCA_000351865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/865/GCA_000351865.1_Esch_coli_KTE111_V1	-	KTE111
Mycobacterium tuberculosis OFXR-16	1295808	PRJNA191020	191020	Terrabacteria group	Actinobacteria	4.41585	65.5	-	JLBY01	11	4303	4104	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN01925702	GCA_000660225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/225/GCA_000660225.1_Myco_tube_OFXR-16_V1	-	OFXR-16
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.86743	37.9	-	LUEG01	49	2911	2832	3/8/16	3/1/17	Contig	FDA/CFSAN	SAMN04414898	GCA_001583285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/285/GCA_001583285.1_CFSAN026602_01.1	-	CFSAN026602
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.8899	30.1	-	MOUW01	71	2042	1851	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04338321	GCA_001877195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/195/GCA_001877195.1_ASM187719v1	-	CDPHFDLB-F15M00516E1
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_0956	886723	PRJNA52507	52507	Proteobacteria	Gammaproteobacteria	4.73169	52	-	ALGD01	59	4865	4615	12/31/12	5/19/17	Contig	FDA	SAMN01041169	GCA_000329505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/505/GCA_000329505.1_ASM32950v1	23383127	CDC_2010K_0956
Staphylococcus aureus AMMC6075	1409443	PRJNA223763	223763	Terrabacteria group	Firmicutes	2.88495	32.7	-	JBLH01	14	3033	2875	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381504	GCA_000539055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/055/GCA_000539055.1_Stap_aure_AMMC6075_V1	-	AMMC6075
Staphylococcus aureus MISS6110	1409444	PRJNA223764	223764	Terrabacteria group	Firmicutes	2.87637	32.8	-	JBSR01	5	3030	2874	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381505	GCA_000539075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/075/GCA_000539075.1_Stap_aure_MISS6110_V1	-	MISS6110
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1455	886724	PRJNA52509	52509	Proteobacteria	Gammaproteobacteria	4.69555	52.1	-	ALGE01	44	4811	4562	12/31/12	5/19/17	Contig	FDA	SAMN01041172	GCA_000329525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/525/GCA_000329525.1_ASM32952v1	23383127	CDC_2010K_1455
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.63748	30.4	-	MOUZ01	25	1697	1590	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04158371	GCA_001877205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/205/GCA_001877205.1_ASM187720v1	-	CDPHFDLB-F12M00589-a1
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.98188	37.9	-	LUEF01	180	2974	2888	3/8/16	3/1/17	Contig	FDA/CFSAN	SAMN04414900	GCA_001583315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/315/GCA_001583315.1_CFSAN026604_01.1	-	CFSAN026604
Mycobacterium tuberculosis TKK-01-0001	1324218	PRJNA198103	198103	Terrabacteria group	Actinobacteria	4.41211	65.6	-	JLZU01	1	4284	4113	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053741	GCA_000660245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/245/GCA_000660245.1_Myco_tube_TKK-01-0001_V1	-	TKK-01-0001
Escherichia coli KTE116	1182708	PRJNA164959	164959	Proteobacteria	Gammaproteobacteria	5.34924	50.7	-	ANUY01	6	5532	5222	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854660	GCA_000351885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/885/GCA_000351885.1_Esch_coli_KTE116_V1	-	KTE116
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.15085	39.5	-	CLTV01	56	2351	2127	3/21/15	3/11/17	Contig	SC	SAMEA1029084	GCA_001110365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/365/GCA_001110365.1_6972_5_19	-	SMRU2635
Candidatus Profftella armatura	669502	PRJNA292590	292590	Proteobacteria	Betaproteobacteria	0.463023	24.2953	chromosome:NZ_CP012591.1/CP012591.1; plasmid unnamed:NZ_CP012592.1/CP012592.1	-	2	420	357	9/4/15	4/11/17	Complete Genome	USDA-ARS	SAMN03999420	GCA_001278785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/785/GCA_001278785.1_ASM127878v1	26543117	YCPA
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.1705	51.5	-	FEXC01	77	2528	2155	2/9/16	3/21/17	Scaffold	SC	SAMEA2674362	GCA_900033165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/165/GCA_900033165.1_14324_5_25	-	2842STDY5881558
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.0582	65.9	-	CVVL01	208	6791	6521	6/24/15	3/18/17	Contig	PHE	SAMEA3374613	GCA_001180905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/905/GCA_001180905.1_P25_London_12_VIM_2_08_10	-	P25_London_12_VIM_2_08_10
Acinetobacter baumannii 44467_1	1310975	PRJNA195053	195053	Proteobacteria	Gammaproteobacteria	4.08955	39	-	JGBS01	171	4119	3795	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644680	GCA_000592675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/675/GCA_000592675.1_ASM59267v1	-	44467_1
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.15956	35.4	-	FJQX01	169	2182	2047	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888121	GCA_900073645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/645/GCA_900073645.1_SA81	-	-
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04693	41.2	-	FISS01	22	2062	1954	2/10/16	3/19/17	Contig	SC	SAMEA1566114	GCA_900065265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/265/GCA_900065265.1_8337_6_91	-	FX73_1
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.71822	50.9	-	CXAQ01	348	5087	4573	7/16/15	2/24/17	Scaffold	SC	SAMEA954728	GCA_001261215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/215/GCA_001261215.1_5008_7_11	-	Sh74369_401064
Burkholderia pseudomallei OB	1290415	PRJNA188495	188495	Proteobacteria	Betaproteobacteria	6.09545	67.4	-	APLK01	2283	-	-	5/22/13	1/8/14	Contig	"Universiti Malaya, Kuala Lumpur"	SAMN02471840	GCA_000401075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/075/GCA_000401075.1_B.pseudomallei_OB	-	OB
Vibrio cholerae	666	PRJNA307227	307227	Proteobacteria	Gammaproteobacteria	4.02899	47.4	-	LQBY01	182	3722	3182	1/14/16	1/14/16	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN04376927	GCA_001515105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/105/GCA_001515105.1_ASM151510v1	-	M1395
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.2747	29.1	-	FANG01	1664	3823	3648	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664429	GCA_900014695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/695/GCA_900014695.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae UHKPC04	1284823	PRJNA187315	187315	Proteobacteria	Gammaproteobacteria	5.55027	57.1	-	APVV01	232	5666	5484	6/4/13	2/21/17	Contig	JCVI	SAMN02141986	GCA_000406705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/705/GCA_000406705.1_gkp37v01	24913165	UHKPC04
Vibrio parahaemolyticus	670	PRJNA354199	354199	Proteobacteria	Gammaproteobacteria	5.2865	45.2	-	MPPT01	44	5195	4938	7/18/17	7/21/17	Contig	University of New Hampshire	SAMN06042549	GCA_002221005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/005/GCA_002221005.1_ASM222100v1	28687650	MAVP-112
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.11939	37.5	-	FXHU01	135	3235	2976	4/26/17	5/6/17	Scaffold	SC	SAMEA3893636	GCA_900179445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/445/GCA_900179445.1_19789_6_170	-	VREN3293
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.71798	31.2	-	FAYO01	45	1763	1647	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683002	GCA_001499395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/395/GCA_001499395.1_SWAN333	-	n/a
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16538	64	-	FRZL01	35	5267	5091	12/14/16	3/21/17	Scaffold	SC	SAMEA2259546	GCA_900130965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/965/GCA_900130965.1_11861_7_10	-	741
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16645	64	-	FRZH01	36	5259	5101	12/14/16	3/21/17	Scaffold	SC	SAMEA2259548	GCA_900130985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/130/985/GCA_900130985.1_11861_7_12	-	743
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.65979	31.4	-	FAYS01	19	1717	1630	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683045	GCA_001499415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/415/GCA_001499415.1_EC3338	-	n/a
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.16339	37.4	-	FXHL01	205	3283	3061	4/26/17	5/6/17	Scaffold	SC	SAMEA3893550	GCA_900179455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/455/GCA_900179455.1_19789_6_52	-	VREN1629
Vibrio parahaemolyticus	670	PRJNA354199	354199	Proteobacteria	Gammaproteobacteria	5.23183	45.2	-	MPPS01	63	5109	4877	7/18/17	7/21/17	Contig	University of New Hampshire	SAMN06042548	GCA_002221015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/015/GCA_002221015.1_ASM222101v1	28687650	MAVP-109
Klebsiella pneumoniae VAKPC252	1284824	PRJNA187316	187316	Proteobacteria	Gammaproteobacteria	5.47681	57.2	-	APVW01	175	5546	5369	6/4/13	2/20/17	Contig	JCVI	SAMN02142041	GCA_000406725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/725/GCA_000406725.1_gkp38v01	24913165	VAKPC252
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.32072	29.2	-	FANX01	1647	3943	3698	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664443	GCA_900014735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/735/GCA_900014735.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA307230	307230	Proteobacteria	Gammaproteobacteria	3.95514	47.6	-	LQCA01	91	3662	2949	1/14/16	1/14/16	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN04376930	GCA_001515165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/515/165/GCA_001515165.1_ASM151516v1	-	M1522
Burkholderia pseudomallei OS	1290414	PRJNA188496	188496	Proteobacteria	Betaproteobacteria	6.38065	67.7	-	APLL01	1518	-	-	5/22/13	1/8/14	Contig	"Universiti Malaya, Kuala Lumpur"	SAMN02471850	GCA_000401095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/095/GCA_000401095.1_B.pseudomallei_OS	-	OS
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.9001	50.5	-	CWZD01	459	5537	4718	7/16/15	2/24/17	Scaffold	SC	SAMEA2445738	GCA_001261235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/235/GCA_001261235.1_12971_8_49	-	H135120400
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04581	41.2	-	FISO01	20	2059	1954	2/10/16	3/19/17	Contig	SC	SAMEA1566086	GCA_900065275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/275/GCA_900065275.1_8337_6_93	-	FX77_1
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.14406	35.5	-	FJQJ01	142	2180	2037	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888124	GCA_900073655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/655/GCA_900073655.1_SA84	-	-
Acinetobacter baumannii 44467_2	1310976	PRJNA195054	195054	Proteobacteria	Gammaproteobacteria	4.07836	39	-	JGBR01	175	4084	3753	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644682	GCA_000592695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/695/GCA_000592695.1_ASM59269v1	-	44467_2
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.19917	65.7	-	CVVN01	225	6995	6721	6/23/15	3/18/17	Contig	PHE	SAMEA3374614	GCA_001180925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/925/GCA_001180925.1_P26_Wales_1_VIM_2_11_10	-	P26_Wales_1_VIM_2_11_10
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12971	51.7	-	FEXS01	83	2498	2169	2/9/16	3/19/17	Scaffold	SC	SAMEA2674446	GCA_900033175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/175/GCA_900033175.1_14355_7_9	-	2842STDY5881638
Helicobacter pylori HPKX_438_AG0C1	499171	PRJNA28543	28543	Proteobacteria	delta/epsilon subdivisions	1.81966	39.5	-	ABJO01	2602	-	-	3/27/08	11/19/13	Contig	Washington University Medical School	SAMN00000754	GCA_000172195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/195/GCA_000172195.1_ASM17219v1	18332421	HPKX_438_AG0C1
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.07727	39.7	-	CLDG01	72	2293	2090	3/21/15	3/11/17	Contig	SC	SAMEA1025920	GCA_001110385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/385/GCA_001110385.1_6899_4_8	-	SMRU2024
Escherichia coli KTE119	1182710	PRJNA164963	164963	Proteobacteria	Gammaproteobacteria	5.18739	50.8	-	ANUZ01	6	5350	4983	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854662	GCA_000351905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/905/GCA_000351905.1_Esch_coli_KTE119_V1	-	KTE119
Mycobacterium tuberculosis TKK-01-0002	1324219	PRJNA198104	198104	Terrabacteria group	Actinobacteria	4.40608	65.5	-	JLZT01	7	4308	4121	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053742	GCA_000660265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/265/GCA_000660265.1_Myco_tube_TKK-01-0002_V1	-	TKK-01-0002
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.89835	37.9	-	LUEE01	55	2898	2829	3/8/16	3/1/17	Contig	FDA/CFSAN	SAMN04414901	GCA_001583335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/335/GCA_001583335.1_CFSAN026605_01.1	-	CFSAN026605
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.87686	30.1	-	MOUV01	85	2017	1837	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN05163879	GCA_001877255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/255/GCA_001877255.1_ASM187725v1	-	CDPHFDLB-F15M00516E2
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1575	886725	PRJNA52511	52511	Proteobacteria	Gammaproteobacteria	4.69086	52.2	-	ALGF01	51	4809	4561	12/31/12	5/19/17	Contig	FDA	SAMN01041161	GCA_000329545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/545/GCA_000329545.1_ASM32954v1	23383127	CDC_2010K_1575
Staphylococcus aureus LAMC0047	1409445	PRJNA223765	223765	Terrabacteria group	Firmicutes	2.8995	32.9	-	JBSQ01	20	3056	2887	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381506	GCA_000539095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/095/GCA_000539095.1_Stap_aure_LAMC0047_V1	-	LAMC0047
Staphylococcus aureus LAMC0050	1409446	PRJNA223766	223766	Terrabacteria group	Firmicutes	2.92349	32.7	-	JBSP01	6	3084	2925	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381507	GCA_000539115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/115/GCA_000539115.1_Stap_aure_LAMC0050_V1	-	LAMC0050
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1725	886726	PRJNA52513	52513	Proteobacteria	Gammaproteobacteria	4.73522	52	-	ALGG01	41	4869	4617	12/31/12	5/19/17	Contig	FDA	SAMN01041166	GCA_000329565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/565/GCA_000329565.1_ASM32956v1	23383127	CDC_2010K_1725
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.71686	30.3	-	MOUU01	62	1809	1675	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04158374	GCA_001877265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/265/GCA_001877265.1_ASM187726v1	-	CDPHFDLB-F15M00521-1
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.87554	37.9	-	LUED01	37	2903	2820	3/8/16	3/1/17	Contig	FDA/CFSAN	SAMN04414902	GCA_001583355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/355/GCA_001583355.1_CFSAN026606_01.1	-	CFSAN026606
Mycobacterium tuberculosis TKK-01-0003	1324220	PRJNA198105	198105	Terrabacteria group	Actinobacteria	4.40578	65.5	-	JLZS01	9	4305	4103	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053743	GCA_000660285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/285/GCA_000660285.1_Myco_tube_TKK-01-0003_V1	-	TKK-01-0003
Escherichia coli KTE142	1182722	PRJNA164987	164987	Proteobacteria	Gammaproteobacteria	5.03115	50.5	-	ANVA01	17	5160	4751	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00854674	GCA_000351925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/925/GCA_000351925.1_Esch_coli_KTE142_V1	-	KTE142
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08939	39.7	-	CKSX01	53	2316	2097	3/21/15	3/11/17	Contig	SC	SAMEA1026259	GCA_001110465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/465/GCA_001110465.1_6823_1_18	-	SMRU1866
Helicobacter pylori HPKX_438_CA4C1	499172	PRJNA28545	28545	Proteobacteria	delta/epsilon subdivisions	1.56639	39.2	-	ABJP01	3766	-	-	3/27/08	11/19/13	Contig	Washington University Medical School	SAMN00000755	GCA_000172215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/215/GCA_000172215.1_ASM17221v1	18332421	HPKX_438_CA4C1
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.17541	51.5	-	FEXZ01	80	2536	2171	2/9/16	3/21/17	Scaffold	SC	SAMEA2674552	GCA_900033185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/185/GCA_900033185.1_14355_7_86	-	2842STDY5881715
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.23797	65.6	-	CVVX01	293	7038	6746	6/23/15	3/18/17	Contig	PHE	SAMEA3374615	GCA_001180945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/945/GCA_001180945.1_P27_Wales_1_VIM_2_02_11	-	P27_Wales_1_VIM_2_02_11
Acinetobacter baumannii 44467_3	1310977	PRJNA195055	195055	Proteobacteria	Gammaproteobacteria	4.12066	39	-	JGBQ01	187	4170	3810	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644683	GCA_000592715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/715/GCA_000592715.1_ASM59271v1	-	44467_3
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.18385	35.5	-	FJRB01	168	2228	2070	9/30/16	3/21/17	Contig	INSTITUT PASTEUR	SAMEA3888125	GCA_900073665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/665/GCA_900073665.1_SA85	-	-
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.26341	40.8	-	FIFT01	39	2310	2132	2/10/16	3/19/17	Contig	SC	SAMEA1316631	GCA_900065385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/385/GCA_900065385.1_7114_5_20	-	LSS20
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.73541	50.7	-	CXIZ01	386	5303	4580	7/16/15	2/24/17	Scaffold	SC	SAMEA2003898	GCA_001261255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/255/GCA_001261255.1_8289_7_85	-	86328
Burkholderia pseudomallei CB	1290413	PRJNA188497	188497	Proteobacteria	Betaproteobacteria	6.10254	67.5	-	APLM01	2069	-	-	5/22/13	1/8/14	Contig	"Universiti Malaya, Kuala Lumpur"	SAMN02471860	GCA_000401115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/115/GCA_000401115.1_B.pseudomallei_CB	-	CB
Vibrio cholerae O1 biovar El Tor	686	PRJNA276767	276767	Proteobacteria	Gammaproteobacteria	2.92034	47.6	-	LUCN01	28	-	-	3/25/16	3/25/16	Contig	Irkutsk Antiplague Research Institute of Rospotrebnadzor	SAMN04534545	GCA_001597715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/715/GCA_001597715.1_ASM159771v1	-	I-1181
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.13016	28.5	-	FAOB01	325	3761	3651	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664450	GCA_900014755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/755/GCA_900014755.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae 440_1540	1304921	PRJNA193165	193165	Proteobacteria	Gammaproteobacteria	5.48829	57.3	-	APWG01	213	5559	5400	6/4/13	2/21/17	Contig	JCVI	SAMN02141992	GCA_000406745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/745/GCA_000406745.1_gkp54v01	24913165	440_1540
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.10505	45.2	-	NIXQ01	32	4925	4684	7/18/17	7/21/17	Contig	University of New Hampshire	SAMN06917284	GCA_002221065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/065/GCA_002221065.1_ASM222106v1	28687650	MAVP-108
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.18564	37.4	-	FXGX01	213	3311	3085	4/26/17	5/6/17	Scaffold	SC	SAMEA3893525	GCA_900179465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/465/GCA_900179465.1_19789_6_39	-	VREN1533
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68641	31.3	-	FBJP01	13	1733	1643	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683315	GCA_001499435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/435/GCA_001499435.1_CCN20	-	n/a
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.09483	64.1	-	FRZN01	19	5119	4977	12/14/16	3/21/17	Scaffold	SC	SAMEA2259598	GCA_900131005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/005/GCA_900131005.1_11861_7_58	-	793
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.07755	64.1	-	FRZQ01	18	5090	4973	12/14/16	3/21/17	Scaffold	SC	SAMEA2259607	GCA_900131015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/015/GCA_900131015.1_11861_7_67	-	802
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.59801	31.7	-	FBQC01	41	1604	1537	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683485	GCA_001499455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/455/GCA_001499455.1_H110340458	-	n/a
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.9609	37.7	-	FXHS01	131	3054	2821	4/26/17	5/6/17	Scaffold	SC	SAMEA3893643	GCA_900179475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/475/GCA_900179475.1_19789_6_174	-	VREN3347
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.16245	45.2	-	NIXR01	82	4958	4722	7/18/17	7/21/17	Contig	University of New Hampshire	SAMN06917283	GCA_002221075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/075/GCA_002221075.1_ASM222107v1	28687650	MAVP-G
Klebsiella pneumoniae VAKPC254	1284825	PRJNA187317	187317	Proteobacteria	Gammaproteobacteria	5.53166	57.2	-	APVX01	175	5603	5427	6/4/13	2/21/17	Contig	JCVI	SAMN02142042	GCA_000406825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/825/GCA_000406825.1_gkp39v01	24913165	VAKPC254
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.0824	28.5	-	FAOC01	528	3759	3609	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664451	GCA_900014765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/765/GCA_900014765.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA306832	306832	Proteobacteria	Gammaproteobacteria	3.92161	47.5	-	LPXR01	91	-	-	4/8/16	4/8/16	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN04364593	GCA_001617665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/665/GCA_001617665.1_ASM161766v1	-	CW-6
Burkholderia pseudomallei CS	1290412	PRJNA188498	188498	Proteobacteria	Betaproteobacteria	6.18605	67.6	-	APLN01	1722	-	-	5/22/13	1/8/14	Contig	"Universiti Malaya, Kuala Lumpur"	SAMN02471846	GCA_000401135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/135/GCA_000401135.1_B.pseudomallei_CS	-	CS
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.67624	50.7	-	CWZH01	396	5215	4495	7/16/15	2/24/17	Scaffold	SC	SAMEA2445750	GCA_001261295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/295/GCA_001261295.1_12971_8_59	-	H132060833
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.22843	41	-	FIKM01	49	2260	2080	2/10/16	3/19/17	Contig	SC	SAMEA1316630	GCA_900065395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/395/GCA_900065395.1_7054_7_91	-	SS1052
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.14225	35.5	-	FJQO01	166	2169	2041	9/30/16	3/21/17	Contig	INSTITUT PASTEUR	SAMEA3888129	GCA_900073675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/675/GCA_900073675.1_SA89	-	-
Acinetobacter baumannii 44467_4	1310978	PRJNA195056	195056	Proteobacteria	Gammaproteobacteria	4.10801	39.1	-	JGBP01	155	4127	3814	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644684	GCA_000592735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/735/GCA_000592735.1_ASM59273v1	-	44467_4
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.02393	65.9	-	CVUQ01	224	6749	6480	6/23/15	3/18/17	Contig	PHE	SAMEA3374616	GCA_001180965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/965/GCA_001180965.1_P28_London_17_02_11	-	P28_London_17_02_11
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15556	51.6	-	FEYW01	71	2480	2164	2/9/16	3/19/17	Scaffold	SC	SAMEA2674134	GCA_900033195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/195/GCA_900033195.1_14555_5_13	-	2842STDY5881354
Helicobacter pylori B128	544406	PRJNA30397	30397	Proteobacteria	delta/epsilon subdivisions	1.64922	38.8	-	ABSY01	73	1768	1731	12/9/08	1/8/14	Contig	Vanderbilt University School of Medicine	SAMN02472068	GCA_000172955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/955/GCA_000172955.1_ASM17295v1	19123947	B128
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.10595	39.5	-	CNPV02	205	2268	2072	3/22/15	3/11/17	Contig	SC	SAMEA1032512	GCA_001110485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/485/GCA_001110485.2_6952_4_23	-	509365
Escherichia coli KTE143	1182723	PRJNA164989	164989	Proteobacteria	Gammaproteobacteria	5.07991	50.6	-	ANVB01	11	5315	4842	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00854675	GCA_000351945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/945/GCA_000351945.1_Esch_coli_KTE143_V1	-	KTE143
Mycobacterium tuberculosis TKK-01-0004	1324221	PRJNA198106	198106	Terrabacteria group	Actinobacteria	4.40821	65.6	-	JLZR01	1	4281	4118	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053744	GCA_000660305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/305/GCA_000660305.1_Myco_tube_TKK-01-0004_V1	-	TKK-01-0004
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.94356	37.9	-	LUEC01	42	2999	2907	3/8/16	3/1/17	Contig	FDA/CFSAN	SAMN04414904	GCA_001583365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/365/GCA_001583365.1_CFSAN026609_01.1	-	CFSAN026609
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.72781	30.3	-	MOUT01	78	1833	1684	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04158375	GCA_001877285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/285/GCA_001877285.1_ASM187728v1	-	CDPHFDLB-F15M00521-2
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1745	886727	PRJNA52515	52515	Proteobacteria	Gammaproteobacteria	4.73045	52	-	ALGH01	53	4852	4613	12/31/12	5/19/17	Contig	FDA	SAMN01041187	GCA_000329585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/585/GCA_000329585.1_ASM32958v1	23383127	CDC_2010K_1745
Staphylococcus aureus UCIM6053	1409447	PRJNA223767	223767	Terrabacteria group	Firmicutes	2.83602	32.9	-	JBSO01	22	2968	2798	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381508	GCA_000539135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/135/GCA_000539135.1_Stap_aure_UCIM6053_V1	-	UCIM6053
Staphylococcus aureus UCIM6055	1409448	PRJNA223768	223768	Terrabacteria group	Firmicutes	2.89187	32.8	-	JBSN01	20	3028	2868	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381509	GCA_000539155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/155/GCA_000539155.1_Stap_aure_UCIM6055_V1	-	UCIM6055
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1791	886728	PRJNA52517	52517	Proteobacteria	Gammaproteobacteria	4.69353	52.1	-	ALGI01	40	4808	4559	12/31/12	5/19/17	Contig	FDA	SAMN01041182	GCA_000329605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/605/GCA_000329605.1_ASM32960v1	23383127	CDC_2010K_1791
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.73765	30.3	-	MOUS01	26	1849	1741	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04158376	GCA_001877305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/305/GCA_001877305.1_ASM187730v1	-	CDPHFDLB-F15M00591
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	3.02698	37.8	-	LUEB01	45	3091	3022	3/8/16	3/1/17	Contig	FDA/CFSAN	SAMN04414905	GCA_001583395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/583/395/GCA_001583395.1_CFSAN026610_01.1	-	CFSAN026610
Mycobacterium tuberculosis TKK-01-0005	1324222	PRJNA198107	198107	Terrabacteria group	Actinobacteria	4.39718	65.5	-	JLZQ01	5	4302	4093	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053745	GCA_000660325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/325/GCA_000660325.1_Myco_tube_TKK-01-0005_V1	-	TKK-01-0005
Escherichia coli KTE156	1182730	PRJNA165003	165003	Proteobacteria	Gammaproteobacteria	5.01616	50.4	-	ANVC01	6	5063	4750	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854682	GCA_000351965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/965/GCA_000351965.1_Esch_coli_KTE156_V1	-	KTE156
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.06283	39.5	-	CRKZ01	67	2263	2037	3/23/15	3/11/17	Contig	SC	SAMEA1025161	GCA_001110505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/505/GCA_001110505.1_6753_4_22	-	SMRU1558
Helicobacter pylori Hp P-13	992079	PRJNA64185	64185	Proteobacteria	delta/epsilon subdivisions	1.71441	39	-	AKPO01	10	1829	1784	6/28/12	11/19/13	Contig	Institute for Genome Sciences	SAMN00778884	GCA_000274225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/225/GCA_000274225.1_ASM27422v1	23661595	Hp P-13
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.13427	51.7	-	FEYZ01	71	2511	2183	2/9/16	3/19/17	Scaffold	SC	SAMEA2674147	GCA_900033205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/205/GCA_900033205.1_14555_5_17	-	2842STDY5881358
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.06813	65.9	-	CVVO01	227	6796	6524	6/24/15	3/18/17	Contig	PHE	SAMEA3374617	GCA_001180985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/180/985/GCA_001180985.1_P29_London_12_VIM_2_05_11	-	P29_London_12_VIM_2_05_11
Acinetobacter baumannii 25561_10	1310964	PRJNA195041	195041	Proteobacteria	Gammaproteobacteria	4.13833	39	-	JGBG01	111	4155	3879	3/18/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02614556	GCA_000592755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/755/GCA_000592755.1_ASM59275v1	-	25561_10
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	1.95979	35.4	-	FJQM01	155	1982	1856	9/30/16	3/21/17	Contig	INSTITUT PASTEUR	SAMEA3888126	GCA_900073685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/685/GCA_900073685.1_SA86	-	-
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05659	41.1	-	FIMP01	20	2074	1958	2/10/16	3/19/17	Contig	SC	SAMEA1566064	GCA_900065405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/405/GCA_900065405.1_8337_6_17	-	BM253a
Shigella sonnei	624	PRJEB2460	204320	Proteobacteria	Gammaproteobacteria	4.62413	50.7	-	CXFX01	386	5056	4471	7/16/15	2/24/17	Scaffold	SC	SAMEA1027662	GCA_001261315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/315/GCA_001261315.1_6350_1_8	-	sh07-0426
Burkholderia pseudomallei LMF	1290419	PRJNA188491	188491	Proteobacteria	Betaproteobacteria	6.34067	68	-	APLG01	1039	-	-	5/22/13	1/8/14	Contig	"Universiti Malaya, Kuala Lumpur"	SAMN02471856	GCA_000401155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/155/GCA_000401155.1_B.pseudomallei_LMF	-	LMF
Vibrio cholerae	666	PRJNA308784	308784	Proteobacteria	Gammaproteobacteria	3.97288	47.5	-	LRMU01	143	3670	2906	5/5/16	5/5/16	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN04412776	GCA_001637545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/545/GCA_001637545.1_ASM163754v1	-	M139
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.20829	28.7	-	FAOF01	919	3863	3709	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664453	GCA_900014785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/785/GCA_900014785.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae VAKPC269	1284826	PRJNA187318	187318	Proteobacteria	Gammaproteobacteria	5.35422	57.3	-	APVY01	155	5408	5246	6/4/13	2/20/17	Contig	JCVI	SAMN02142043	GCA_000406845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/845/GCA_000406845.1_gkp40v01	24913165	VAKPC269
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.02721	45.4	-	NIXS01	51	4847	4629	7/18/17	7/21/17	Contig	University of New Hampshire	SAMN06917282	GCA_002221085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/085/GCA_002221085.1_ASM222108v1	28687650	CTVP35C
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.08732	37.5	-	FXIC01	198	3206	2969	4/26/17	5/6/17	Scaffold	SC	SAMEA3893539	GCA_900179485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/485/GCA_900179485.1_19789_6_46	-	VREN1623
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.79742	31	-	FBPH01	71	1867	1737	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683462	GCA_001499475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/475/GCA_001499475.1_H142080277	-	n/a
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98765	64.1	-	FVCG01	8	5064	4923	3/10/17	3/18/17	Scaffold	SC	SAMEA2259599	GCA_900131025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/025/GCA_900131025.1_11861_7_59	-	794
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.80591	64.2	-	FRZI01	23	4754	4621	12/14/16	3/21/17	Scaffold	SC	SAMEA2259694	GCA_900131045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/045/GCA_900131045.1_11861_8_23	-	889
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.68897	31.3	-	FBIW01	17	1750	1660	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683295	GCA_001499515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/515/GCA_001499515.1_UNCIC2	-	n/a
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.08956	37.5	-	FXGY01	204	3208	2972	4/26/17	5/6/17	Scaffold	SC	SAMEA3893553	GCA_900179505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/505/GCA_900179505.1_19789_6_54	-	VREN1631
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.06926	45.3	-	NIXU01	41	4806	4594	7/18/17	7/21/17	Contig	University of New Hampshire	SAMN06917279	GCA_002221145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/145/GCA_002221145.1_ASM222114v1	28687650	CTVP43C
Klebsiella pneumoniae 540_1460	1304923	PRJNA193168	193168	Proteobacteria	Gammaproteobacteria	5.55883	57.1	-	APWI01	213	5652	5459	6/4/13	2/20/17	Contig	JCVI	SAMN02141994	GCA_000406865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/865/GCA_000406865.1_gkp56v01	24913165	540_1460
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.22286	28.4	-	FAOE01	304	3912	3785	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664455	GCA_900014795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/795/GCA_900014795.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA308792	308792	Proteobacteria	Gammaproteobacteria	3.9578	47.5	-	LQYZ01	153	3660	2886	5/5/16	5/5/16	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN04413737	GCA_001637555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/555/GCA_001637555.1_ASM163755v1	-	M299
Burkholderia pseudomallei	28450	PRJNA258417	258417	Proteobacteria	Betaproteobacteria	7.22287	68.1	-	JQII01	3	6171	6097	11/7/14	2/24/15	Contig	Los Alamos National Laboratory	SAMN03004375	GCA_000773345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/345/GCA_000773345.1_GFC_22	25676747	MSHR3997
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.75648	50.7	-	CXMP01	385	5377	4588	7/17/15	2/24/17	Scaffold	SC	SAMEA2055828	GCA_001261355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/355/GCA_001261355.1_9870_6_22	-	143561
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.05481	41.1	-	FIMW01	24	2073	1956	2/10/16	3/19/17	Contig	SC	SAMEA1566089	GCA_900065415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/415/GCA_900065415.1_8337_6_19	-	BM264a
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.1755	35.5	-	FJQP01	164	2223	2063	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888123	GCA_900073695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/695/GCA_900073695.1_SA83	-	-
Acinetobacter baumannii 43557_1	1311048	PRJNA195126	195126	Proteobacteria	Gammaproteobacteria	4.19805	39.2	-	JHCS01	122	4151	3839	3/26/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644708	GCA_000600375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/375/GCA_000600375.1_ASM60037v1	-	43557_1
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.03553	65.8	-	CVVK01	206	6796	6537	6/23/15	3/18/17	Contig	PHE	SAMEA3374618	GCA_001181005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/005/GCA_001181005.1_P30_South_East_2_VIM_2_10_11	-	P30_South_East_2_VIM_2_10_11
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16153	51.6	-	FEZB01	82	2519	2166	2/9/16	3/19/17	Scaffold	SC	SAMEA2674144	GCA_900033215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/215/GCA_900033215.1_14555_5_16	-	2842STDY5881357
Helicobacter pylori Hp P-25	992084	PRJNA64195	64195	Proteobacteria	delta/epsilon subdivisions	1.66746	39.2	-	AKPS01	3	1872	1831	6/28/12	11/19/13	Contig	Institute for Genome Sciences	SAMN00778879	GCA_000274865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/274/865/GCA_000274865.1_ASM27486v1	23661595	Hp P-25
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04936	39.6	-	CNZX02	184	2196	1983	3/23/15	3/11/17	Contig	SC	SAMEA1463031	GCA_001110545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/545/GCA_001110545.2_7553_5_88	-	PT8076
Escherichia coli KTE161	1182733	PRJNA165009	165009	Proteobacteria	Gammaproteobacteria	5.11772	50.4	-	ANVD01	3	5180	4795	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854685	GCA_000351985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/351/985/GCA_000351985.1_Esch_coli_KTE161_V1	-	KTE161
Mycobacterium tuberculosis TKK-01-0006	1324223	PRJNA198108	198108	Terrabacteria group	Actinobacteria	4.40497	65.6	-	JLZP01	1	4285	4117	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053746	GCA_000660345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/345/GCA_000660345.1_Myco_tube_TKK-01-0006_V1	-	TKK-01-0006
Listeria monocytogenes	1639	PRJNA293674	293674	Terrabacteria group	Firmicutes	3.00921	37.8	-	LKUZ01	21	3091	2993	3/10/16	3/1/17	Contig	Nofima	SAMN04009326	GCA_001586295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/295/GCA_001586295.1_ASM158629v1	26953695	MF3949
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.7244	30.3	-	MOUR01	22	1802	1688	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04158377	GCA_001877335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/335/GCA_001877335.1_ASM187733v1	-	CDPHFDLB-F15M00592
Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1795	886720	PRJNA52519	52519	Proteobacteria	Gammaproteobacteria	4.68986	52.1	-	ALGJ01	47	4810	4551	12/31/12	5/19/17	Contig	FDA	SAMN01041183	GCA_000329625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/625/GCA_000329625.1_ASM32962v1	23383127	CDC_2010K_1795
Staphylococcus aureus FVRH6002	1409450	PRJNA223770	223770	Terrabacteria group	Firmicutes	3.01261	32.8	-	JBSL01	35	3186	3001	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381511	GCA_000539175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/175/GCA_000539175.1_Stap_aure_FVRH6002_V1	-	FVRH6002
Staphylococcus aureus SMMC6097	1409451	PRJNA223771	223771	Terrabacteria group	Firmicutes	2.89548	32.9	-	JBSK01	8	3038	2876	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381512	GCA_000539195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/195/GCA_000539195.1_Stap_aure_SMMC6097_V1	-	SMMC6097
Salmonella enterica subsp. enterica serovar Enteritidis str. 576709	887063	PRJNA52613	52613	Proteobacteria	Gammaproteobacteria	4.73378	52	-	ALGK01	63	4864	4620	12/31/12	5/19/17	Contig	FDA	SAMN01041103	GCA_000329645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/645/GCA_000329645.1_ASM32964v1	23383127	576709
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.73518	30.4	-	MOUQ01	28	1835	1729	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04158378	GCA_001877355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/355/GCA_001877355.1_ASM187735v1	-	CDPHFDLB-F15M00596
Listeria monocytogenes	1639	PRJNA293674	293674	Terrabacteria group	Firmicutes	3.00982	37.8	-	LKVA01	14	3091	2996	3/10/16	3/1/17	Contig	Nofima	SAMN04009325	GCA_001586305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/305/GCA_001586305.1_ASM158630v1	26953695	MF4245
Mycobacterium tuberculosis TKK-01-0007	1324224	PRJNA198109	198109	Terrabacteria group	Actinobacteria	4.42709	65.5	-	JLZO01	2	4305	4114	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053747	GCA_000660365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/365/GCA_000660365.1_Myco_tube_TKK-01-0007_V1	-	TKK-01-0007
Escherichia coli KTE162	1182734	PRJNA165011	165011	Proteobacteria	Gammaproteobacteria	5.00889	50.8	-	ANVE01	10	5162	4850	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854686	GCA_000352005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/005/GCA_000352005.1_Esch_coli_KTE162_V1	-	KTE162
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.0538	39.6	-	CMQN01	47	2263	2032	3/22/15	3/11/17	Contig	SC	SAMEA2061737	GCA_001110705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/705/GCA_001110705.1_9803_8_13	-	9N
Helicobacter pylori 8A3	981211	PRJEA62409	62409	Proteobacteria	delta/epsilon subdivisions	1.54718	39	-	CADD01	44	-	-	3/9/11	3/11/11	Contig	MHH Hannover Medical School	SAMEA2272407	GCA_000285055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/055/GCA_000285055.1_ASM28505v1	21383187	8A3
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12408	51.7	-	FEZI01	88	2490	2168	2/9/16	3/19/17	Scaffold	SC	SAMEA2674183	GCA_900033225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/225/GCA_900033225.1_14555_5_27	-	2842STDY5881368
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.21253	65.6	-	CVVS01	320	6992	6706	6/24/15	3/18/17	Contig	PHE	SAMEA3374619	GCA_001181025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/025/GCA_001181025.1_P31_Wales_1_VIM_2_11_11	-	P31_Wales_1_VIM_2_11_11
Acinetobacter baumannii 25878_2	1311046	PRJNA195124	195124	Proteobacteria	Gammaproteobacteria	4.19719	39.3	-	JHCU01	312	4167	3896	3/26/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644706	GCA_000600395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/395/GCA_000600395.1_ASM60039v1	-	25878_2
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.16338	35.5	-	FJQT01	172	2190	2053	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888128	GCA_900073705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/705/GCA_900073705.1_SA88	-	-
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.08156	41.1	-	FIOO01	20	2075	1965	2/10/16	3/19/17	Contig	SC	SAMEA1566204	GCA_900065425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/425/GCA_900065425.1_8337_6_62	-	EN177
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.53592	50.8	-	CXAM01	347	4833	4360	7/16/15	2/24/17	Scaffold	SC	SAMEA954743	GCA_001261375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/375/GCA_001261375.1_5008_7_1	-	Sh41191_401054
Burkholderia pseudomallei	28450	PRJNA278506	278506	Proteobacteria	Betaproteobacteria	7.20916	68.1	-	LAUB02	107	6268	5600	4/28/15	8/27/15	Contig	Manipal University	SAMN03420870	GCA_000981285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/285/GCA_000981285.2_ASM98128v2	26294629	cm_manipal
Vibrio cholerae	666	PRJNA309051	309051	Proteobacteria	Gammaproteobacteria	4.00695	47.5	-	LRFF01	182	3736	3242	5/10/16	5/10/16	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN04419589	GCA_001641745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/745/GCA_001641745.1_ASM164174v1	-	Jun-67
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.09986	28.5	-	CZXT01	294	3746	3639	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664028	GCA_900014855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/855/GCA_900014855.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae 646_1568	1304924	PRJNA193169	193169	Proteobacteria	Gammaproteobacteria	5.39887	57.4	-	APWJ01	139	5457	5289	6/4/13	2/20/17	Contig	JCVI	SAMN02141995	GCA_000406885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/885/GCA_000406885.1_gkp57v01	24913165	646_1568
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.14065	45.2	-	NJAP01	180	4942	4647	7/18/17	7/21/17	Contig	University of New Hampshire	SAMN06917271	GCA_002221165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/165/GCA_002221165.1_ASM222116v1	28687650	MAVP-14
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.04673	37.8	-	FXHW01	154	3161	2935	4/26/17	5/6/17	Scaffold	SC	SAMEA3893639	GCA_900179515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/515/GCA_900179515.1_19789_6_172	-	VREN3305
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.73666	31.2	-	FBMQ01	40	1782	1665	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683397	GCA_001499535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/535/GCA_001499535.1_CCN264	-	n/a
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.85532	64.2	-	FVCL01	11	4852	4734	3/10/17	3/18/17	Scaffold	SC	SAMEA2071302	GCA_900131235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/235/GCA_900131235.1_10665_3_68	-	238
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16751	64.1	-	FSAL01	24	5249	5106	12/14/16	3/21/17	Scaffold	SC	SAMEA2259547	GCA_900131435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/435/GCA_900131435.1_11861_7_11	-	742
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.64789	31.5	-	FAXH01	46	1710	1613	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683504	GCA_001499555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/555/GCA_001499555.1_H043900429	-	n/a
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.20043	37.4	-	FXGZ01	211	3332	3094	4/26/17	5/6/17	Scaffold	SC	SAMEA3893558	GCA_900179525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/525/GCA_900179525.1_19789_6_57	-	VREN1743
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.10657	45.2	-	NJAO01	60	4916	4624	7/18/17	7/21/17	Contig	University of New Hampshire	SAMN06917273	GCA_002221175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/175/GCA_002221175.1_ASM222117v1	28687650	MAVP-46
Klebsiella pneumoniae UHKPC05	1284790	PRJNA187282	187282	Proteobacteria	Gammaproteobacteria	5.50201	57.2	-	ARVM01	187	5592	5413	6/5/13	2/21/17	Contig	JCVI	SAMN02141987	GCA_000408965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/965/GCA_000408965.1_gkp4v01	24913165	UHKPC05
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.17261	29.1	-	FAAC01	796	3796	3651	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664086	GCA_900014875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/875/GCA_900014875.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA309049	309049	Proteobacteria	Gammaproteobacteria	4.11981	47.4	-	LRFE01	89	3836	3228	5/10/16	5/10/16	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN04419583	GCA_001641765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/765/GCA_001641765.1_ASM164176v1	-	M1327
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.72827	50.6	-	CWUL01	431	5696	4403	7/17/15	2/24/17	Scaffold	SC	SAMEA3345057	GCA_001261395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/395/GCA_001261395.1_H14146070601	-	70601ss_1
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.22624	41	-	FIFE01	84	2303	2146	2/10/16	3/19/17	Contig	SC	SAMEA1316626	GCA_900065715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/715/GCA_900065715.1_5749_1_4	-	LOLA-SS004
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.15913	35.5	-	FJQS01	182	2194	2045	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888127	GCA_900073715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/715/GCA_900073715.1_SA87	-	-
Acinetobacter baumannii 25878_1	1311045	PRJNA195123	195123	Proteobacteria	Gammaproteobacteria	4.12628	39.2	-	JHCV01	113	4077	3807	3/26/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644705	GCA_000600415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/415/GCA_000600415.1_ASM60041v1	-	25878_1
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.17272	65.8	-	CVVJ01	200	6923	6656	6/24/15	3/18/17	Contig	PHE	SAMEA3374620	GCA_001181045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/045/GCA_001181045.1_P32_London_17_VIM_2_10_11	-	P32_London_17_VIM_2_10_11
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15491	51.6	-	FEZQ01	85	2509	2152	2/9/16	3/21/17	Scaffold	SC	SAMEA2674206	GCA_900033235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/235/GCA_900033235.1_14555_5_34	-	2842STDY5881375
Helicobacter pylori NQ1701	981215	PRJEA62443	62443	Proteobacteria	delta/epsilon subdivisions	1.63962	38.9	-	CADH01	78	-	-	3/9/11	3/11/11	Contig	MHH Hannover Medical School	SAMEA2272619	GCA_000285135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/135/GCA_000285135.1_ASM28513v1	21383187	NQ1701
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.06383	39.7	-	CMGC01	40	2270	2011	3/21/15	3/11/17	Contig	SC	SAMEA1029360	GCA_001110765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/765/GCA_001110765.1_7038_4_11	-	SMRU2939
Escherichia coli KTE169	1182736	PRJNA165015	165015	Proteobacteria	Gammaproteobacteria	5.25622	50.5	-	ANVF01	13	5341	5010	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854688	GCA_000352025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/025/GCA_000352025.1_Esch_coli_KTE169_V1	-	KTE169
Mycobacterium tuberculosis TKK-01-0009	1324225	PRJNA198110	198110	Terrabacteria group	Actinobacteria	4.42786	65.5	-	JLZM01	7	4298	4137	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053748	GCA_000660385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/385/GCA_000660385.1_Myco_tube_TKK-01-0009_V1	-	TKK-01-0009
Listeria monocytogenes	1639	PRJNA293674	293674	Terrabacteria group	Firmicutes	3.00878	37.8	-	LKUY01	14	3089	2993	3/10/16	3/1/17	Contig	Nofima	SAMN04009323	GCA_001586315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/315/GCA_001586315.1_ASM158631v1	26953695	MF5369
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.62215	30.5	-	MOUP01	15	1705	1609	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04158379	GCA_001877365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/365/GCA_001877365.1_ASM187736v1	-	CDPHFDLB-F15M00600
Salmonella enterica subsp. enterica serovar Enteritidis str. 635290-58	887067	PRJNA52621	52621	Proteobacteria	Gammaproteobacteria	4.68763	52.1	-	ALGL01	78	4810	4556	12/31/12	5/19/17	Contig	FDA	SAMN01041118	GCA_000329665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/665/GCA_000329665.1_ASM32966v1	23383127	635290-58
Staphylococcus aureus AGEN6033	1409452	PRJNA223772	223772	Terrabacteria group	Firmicutes	2.89394	32.8	-	JBSJ01	24	3023	2850	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381513	GCA_000539215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/215/GCA_000539215.1_Stap_aure_AGEN6033_V1	-	AGEN6033
Staphylococcus aureus LAMC6065	1409453	PRJNA223773	223773	Terrabacteria group	Firmicutes	2.79623	32.7	-	JBSI01	20	2904	2729	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381514	GCA_000539235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/235/GCA_000539235.1_Stap_aure_LAMC6065_V1	-	LAMC6065
Salmonella enterica subsp. enterica serovar Enteritidis str. 607308-16	887068	PRJNA52623	52623	Proteobacteria	Gammaproteobacteria	4.71943	52	-	ALGM01	110	4854	4562	12/31/12	5/19/17	Contig	FDA	SAMN01041110	GCA_000329685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/685/GCA_000329685.1_ASM32968v1	23383127	607308-16
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.72451	30.3	-	MOUO01	19	1799	1691	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04158380	GCA_001877395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/395/GCA_001877395.1_ASM187739v1	-	CDPHFDLB-F15M00601
Listeria monocytogenes	1639	PRJNA293674	293674	Terrabacteria group	Firmicutes	3.0096	37.8	-	LQXC01	14	3092	2996	3/10/16	3/1/17	Contig	Nofima	SAMN04404360	GCA_001586325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/325/GCA_001586325.1_ASM158632v1	26953695	MF4077
Mycobacterium tuberculosis TKK-01-0010	1324226	PRJNA198111	198111	Terrabacteria group	Actinobacteria	4.42378	65.6	-	JLZL01	7	4310	4129	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053749	GCA_000660405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/405/GCA_000660405.1_Myco_tube_TKK-01-0010_V1	-	TKK-01-0010
Escherichia coli KTE171	1182738	PRJNA165019	165019	Proteobacteria	Gammaproteobacteria	4.8596	50.8	-	ANVG01	11	5011	4653	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00854690	GCA_000352045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/045/GCA_000352045.1_Esch_coli_KTE171_V1	-	KTE171
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.11275	39.5	-	CPRJ01	72	2323	2075	3/23/15	3/11/17	Contig	SC	SAMEA1483777	GCA_001110805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/805/GCA_001110805.1_8016_3_83	-	PN1
Helicobacter pylori NQ367	981219	PRJEA62451	62451	Proteobacteria	delta/epsilon subdivisions	1.62241	39.1	-	CADL01	90	-	-	3/9/11	3/11/11	Contig	MHH Hannover Medical School	SAMEA2271994	GCA_000285215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/285/215/GCA_000285215.1_ASM28521v1	21383187	NQ367
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.21503	51.6	-	FEZT01	98	2575	2184	2/9/16	3/22/17	Scaffold	SC	SAMEA2674214	GCA_900033245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/245/GCA_900033245.1_14555_5_37	-	2842STDY5881378
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.03998	65.8	-	CVVG01	191	6802	6532	6/23/15	3/18/17	Contig	PHE	SAMEA3374621	GCA_001181065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/065/GCA_001181065.1_P33_London_28_VIM_2_02_12	-	P33_London_28_VIM_2_02_12
Acinetobacter baumannii 44362_2	1311036	PRJNA195114	195114	Proteobacteria	Gammaproteobacteria	4.05797	39	-	JHCP01	186	4084	3677	3/26/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644711	GCA_000600435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/435/GCA_000600435.1_ASM60043v1	-	44362_2
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.11718	35.4	-	FJQN01	144	2152	2011	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888131	GCA_900073725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/725/GCA_900073725.1_SA91	-	-
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.18123	41	-	FIFF01	94	2229	2054	2/10/16	3/19/17	Contig	SC	SAMEA1316648	GCA_900065725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/725/GCA_900065725.1_5749_1_8	-	LOLA-SS008
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.77353	50.7	-	CXLJ01	389	5347	4624	7/17/15	2/24/17	Scaffold	SC	SAMEA2164641	GCA_001261415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/415/GCA_001261415.1_8290_4_95	-	124553
Vibrio cholerae	666	PRJNA383769	383769	Proteobacteria	Gammaproteobacteria	4.74599	47.4	-	NEDV01	2147	-	-	6/15/17	6/15/17	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN06806439	GCA_002196295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/295/GCA_002196295.1_ASM219629v1	-	2403
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.13875	29	-	FAAB01	433	3824	3686	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664087	GCA_900014885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/885/GCA_900014885.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae UHKPC 52	1284814	PRJNA187306	187306	Proteobacteria	Gammaproteobacteria	5.42434	57.3	-	ARVN01	154	5480	5312	6/5/13	2/20/17	Contig	JCVI	SAMN02142019	GCA_000408985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/985/GCA_000408985.1_gkp28v01	24913165	UHKPC 52
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.11874	45.3	-	NIXY01	47	4936	4685	7/18/17	7/21/17	Contig	University of New Hampshire	SAMN06917274	GCA_002221185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/185/GCA_002221185.1_ASM222118v1	28687650	MAVP-50
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.09495	37.5	-	FXHT01	198	3226	2989	4/26/17	5/6/17	Scaffold	SC	SAMEA3893515	GCA_900179535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/535/GCA_900179535.1_19789_6_32	-	VREN1455
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.80946	31	-	FAZX01	54	1899	1784	12/17/15	3/19/17	Contig	INSTITUTE OF FOOD RESEARCH	SAMEA3683056	GCA_001499575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/575/GCA_001499575.1_H120880379	-	n/a
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.86782	64.1	-	FVDL01	13	4818	4684	3/10/17	3/18/17	Scaffold	SC	SAMEA2259565	GCA_900131445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/445/GCA_900131445.1_11861_7_28	-	760
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.0771	64.1	-	FSAM01	19	5091	4959	12/14/16	3/21/17	Scaffold	SC	SAMEA2259577	GCA_900131465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/465/GCA_900131465.1_11861_7_40	-	772
Campylobacter coli	195	PRJNA296596	296596	Proteobacteria	delta/epsilon subdivisions	1.68349	31.4	-	LQXL02	45	1748	1658	1/15/16	3/19/17	Contig	Corpoica	SAMN04358093	GCA_001516795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/795/GCA_001516795.2_ASM151679v2	26988048	M1483PM
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.09635	37.5	-	FXID01	193	3233	2976	4/26/17	5/6/17	Scaffold	SC	SAMEA3893513	GCA_900179545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/545/GCA_900179545.1_19789_6_31	-	VREN1454
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.04817	45.2	-	NIYP01	47	4868	4618	7/18/17	7/21/17	Contig	University of New Hampshire	SAMN06917270	GCA_002221225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/225/GCA_002221225.1_ASM222122v1	28687650	G4186
Klebsiella pneumoniae UHKPC45	1284819	PRJNA187311	187311	Proteobacteria	Gammaproteobacteria	5.62079	57.1	-	ARVO01	210	5723	5518	6/5/13	2/20/17	Contig	JCVI	SAMN02142016	GCA_000409005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/005/GCA_000409005.1_gkp33v01	24913165	UHKPC45
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.16465	28.9	-	FABA01	876	3731	3605	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664111	GCA_900014895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/895/GCA_900014895.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJNA383785	383785	Proteobacteria	Gammaproteobacteria	4.01049	47.6	-	NEDZ01	165	-	-	6/15/17	6/15/17	Contig	"Russia Research Anti-Plague Institute ""Microbe"""	SAMN06806560	GCA_002196325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/325/GCA_002196325.1_ASM219632v1	-	M1509
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.83769	50.7	-	CWVW01	385	5473	4652	7/16/15	2/24/17	Scaffold	SC	SAMEA3345092	GCA_001261435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/435/GCA_001261435.1_Sg_201402995_ATTCCT_L001	-	201402995_1
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.04717	41.1	-	FIFI01	23	2057	1957	2/10/16	3/19/17	Contig	SC	SAMEA1316600	GCA_900065735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/735/GCA_900065735.1_5749_1_10	-	LOLA-SS010
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.13992	35.4	-	FJQK01	124	2185	2054	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888134	GCA_900073735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/735/GCA_900073735.1_SA94	-	-
Acinetobacter baumannii 25878_3	1311047	PRJNA195125	195125	Proteobacteria	Gammaproteobacteria	4.23759	39.2	-	JHCT01	119	4235	3969	3/26/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644707	GCA_000600455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/455/GCA_000600455.1_ASM60045v1	-	25878_3
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.0782	65.8	-	CVVF01	187	6835	6581	6/24/15	3/18/17	Contig	PHE	SAMEA3374622	GCA_001181085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/085/GCA_001181085.1_P34_London_28_VIM_2_02_12	-	P34_London_28_VIM_2_02_12
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.2061	51.5	-	FEZZ01	78	2560	2212	2/9/16	3/19/17	Scaffold	SC	SAMEA2674226	GCA_900033255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/255/GCA_900033255.1_14555_5_43	-	2842STDY5881384
Helicobacter pylori SouthAfrica50	1352357	PRJNA209861	209861	Proteobacteria	delta/epsilon subdivisions	1.60021	38.6	-	AVNI01	2	1936	1895	8/20/13	1/8/14	Contig	Vanderbilt University School of Medicine	SAMN02472070	GCA_000448525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/448/525/GCA_000448525.1_ASM44852v1	24072860	SouthAfrica50
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05687	39.6	-	CNWD02	161	2214	2010	3/23/15	3/5/17	Contig	SC	SAMEA1032432	GCA_001110905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/905/GCA_001110905.2_7001_1_2	-	R34-3079
Escherichia coli KTE6	1169327	PRJNA157573	157573	Proteobacteria	Gammaproteobacteria	5.21337	50.6	-	ANVH01	4	5416	5086	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00847645	GCA_000352065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/065/GCA_000352065.1_Esch_coli_KTE6_V1	-	KTE6
Mycobacterium tuberculosis TKK-01-0011	1324227	PRJNA198112	198112	Terrabacteria group	Actinobacteria	4.37539	65.5	-	JLZK01	6	4253	4095	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053750	GCA_000660425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/425/GCA_000660425.1_Myco_tube_TKK-01-0011_V1	-	TKK-01-0011
Listeria monocytogenes	1639	PRJNA293674	293674	Terrabacteria group	Firmicutes	3.00909	37.8	-	LKUX01	16	3080	2991	3/10/16	3/1/17	Contig	Nofima	SAMN04009324	GCA_001586375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/375/GCA_001586375.1_ASM158637v1	26953695	MF5377
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.72466	30.3	-	MOUN01	23	1804	1690	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04096402	GCA_001877415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/415/GCA_001877415.1_ASM187741v1	-	CDPHFDLB-F15M00602
Salmonella enterica subsp. enterica serovar Enteritidis str. 607308-19	887069	PRJNA52625	52625	Proteobacteria	Gammaproteobacteria	4.72764	52	-	ALGN01	60	4867	4600	12/31/12	5/19/17	Contig	FDA	SAMN01041111	GCA_000329705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/705/GCA_000329705.1_ASM32970v1	23383127	607308-19
Staphylococcus aureus HOAG6084	1409454	PRJNA223774	223774	Terrabacteria group	Firmicutes	2.9628	32.6	-	JBSH01	24	3131	2974	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381515	GCA_000539255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/255/GCA_000539255.1_Stap_aure_HOAG6084_V1	-	HOAG6084
Staphylococcus aureus OCMM6052	1409455	PRJNA223775	223775	Terrabacteria group	Firmicutes	2.90332	32.9	-	JBSG01	33	3035	2849	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381516	GCA_000539275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/275/GCA_000539275.1_Stap_aure_OCMM6052_V1	-	OCMM6052
Salmonella enterica subsp. enterica serovar Enteritidis str. 607307-2	887070	PRJNA52627	52627	Proteobacteria	Gammaproteobacteria	4.72413	52	-	ALGO01	56	4846	4592	12/31/12	5/19/17	Contig	FDA	SAMN01041108	GCA_000329725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/725/GCA_000329725.1_ASM32972v1	23383127	607307-2
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.72398	30.3	-	MOUM01	18	1799	1689	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04338322	GCA_001877435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/435/GCA_001877435.1_ASM187743v1	-	CDPHFDLB-F15M00603F23
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.96019	38	-	LUBA01	5	3020	2886	3/21/16	3/1/17	Contig	FDA/CFSAN	SAMN02850684	GCA_001594305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/305/GCA_001594305.1_ASM159430v1	-	CFSAN012299
Mycobacterium tuberculosis TKK-01-0012	1324228	PRJNA198113	198113	Terrabacteria group	Actinobacteria	4.40754	65.6	-	JLZJ01	1	4279	4114	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053751	GCA_000660445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/445/GCA_000660445.1_Myco_tube_TKK-01-0012_V1	-	TKK-01-0012
Escherichia coli KTE8	1169328	PRJNA157575	157575	Proteobacteria	Gammaproteobacteria	5.14772	50.5	-	ANVI01	9	5235	4880	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00847646	GCA_000352085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/085/GCA_000352085.1_Esch_coli_KTE8_V1	-	KTE8
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.04801	39.8	-	CRVE01	59	2247	2038	3/22/15	3/11/17	Contig	SC	SAMEA1025251	GCA_001111045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/045/GCA_001111045.1_6805_6_8	-	SMRU1712
Helicobacter pylori SA29C	1345505	PRJEB4040	215904	Proteobacteria	delta/epsilon subdivisions	1.65064	39	-	CBNI01	93	-	-	9/21/13	1/30/15	Contig	MHH	SAMEA2272443	GCA_000475555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/555/GCA_000475555.1_SA29C	23898187	SA29C
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12698	51.7	-	FFAO01	97	2481	2165	2/9/16	3/19/17	Scaffold	SC	SAMEA2674256	GCA_900033265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/265/GCA_900033265.1_14555_5_58	-	2842STDY5881399
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.11364	65.8	-	CVUS01	226	6889	6587	6/23/15	3/18/17	Contig	PHE	SAMEA3374623	GCA_001181105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/105/GCA_001181105.1_P35_London_26_VIM_2_05_12	-	P35_London_26_VIM_2_05_12
Acinetobacter baumannii 44362_3	1311037	PRJNA195115	195115	Proteobacteria	Gammaproteobacteria	4.00021	38.8	-	JHCO01	200	4045	3718	3/26/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644712	GCA_000600475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/475/GCA_000600475.1_ASM60047v1	-	44362_3
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.11569	35.4	-	FJQL01	140	2155	2012	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888132	GCA_900073745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/745/GCA_900073745.1_SA92	-	-
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.31794	41.2	-	FIGT01	96	2310	2117	2/10/16	3/19/17	Contig	SC	SAMEA1316552	GCA_900065745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/745/GCA_900065745.1_7114_5_41	-	LSS41
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.76039	50.7	-	CWWI01	395	5328	4508	7/17/15	2/24/17	Scaffold	SC	SAMEA3345100	GCA_001261455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/455/GCA_001261455.1_Sg_201405193_CATTTT_L001	-	201405193_1
Vibrio cholerae	666	PRJNA390691	390691	Proteobacteria	Gammaproteobacteria	3.99783	47.5	-	NIWX01	140	3813	2972	7/13/17	7/13/17	Contig	RAJIV GANDHI CENTRE FOR BIOTECHNOLOGY	SAMN07249013	GCA_002217575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/575/GCA_002217575.1_ASM221757v1	-	W4-13
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.2687	29.1	-	FABH01	1878	3879	3612	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664119	GCA_900014915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/915/GCA_900014915.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae VAKPC278	1284827	PRJNA187319	187319	Proteobacteria	Gammaproteobacteria	5.35527	57.3	-	ARVP01	151	5419	5246	6/5/13	2/21/17	Contig	JCVI	SAMN02142048	GCA_000409025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/025/GCA_000409025.1_gkp41v01	24913165	VAKPC278
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.22291	45.2	-	NIYO01	27	5128	4853	7/18/17	7/21/17	Contig	University of New Hampshire	SAMN06917277	GCA_002221245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/245/GCA_002221245.1_ASM222124v1	28687650	G3578
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.19641	37.4	-	FXIE01	210	3328	3086	4/26/17	5/6/17	Scaffold	SC	SAMEA3893560	GCA_900179555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/555/GCA_900179555.1_19789_6_58	-	VREN1744
Campylobacter coli	195	PRJNA296596	296596	Proteobacteria	delta/epsilon subdivisions	1.78097	31.2	-	LQXK02	55	1885	1794	1/15/16	3/19/17	Contig	Corpoica	SAMN04358091	GCA_001516815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/815/GCA_001516815.2_ASM151681v2	26988048	M1486PM
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.86847	64.1	-	FVDU01	15	4827	4675	3/10/17	3/18/17	Scaffold	SC	SAMEA2259566	GCA_900131475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/475/GCA_900131475.1_11861_7_29	-	761
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.8694	64.2	-	FSAN01	18	4834	4675	12/14/16	3/21/17	Scaffold	SC	SAMEA2259646	GCA_900131485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/485/GCA_900131485.1_11861_8_15	-	841
Campylobacter coli	195	PRJNA242329	242329	Proteobacteria	delta/epsilon subdivisions	1.79215	31.1	-	JOUM01	101	1853	1731	11/10/15	3/19/17	Contig	FDA	SAMN02693028	GCA_001540985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/540/985/GCA_001540985.1_Campylobacter_coli_CVM_N23392_v1.0	-	CVM N23392
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.09227	37.5	-	FXIF01	198	3216	2981	4/26/17	5/6/17	Scaffold	SC	SAMEA3893562	GCA_900179565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/565/GCA_900179565.1_19789_6_60	-	VREN1772
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.22489	45.2	-	NIXV01	58	5071	4865	7/18/17	7/21/17	Contig	University of New Hampshire	SAMN06917278	GCA_002221265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/265/GCA_002221265.1_ASM222126v1	28687650	MAVP-21
Klebsiella pneumoniae UHKPC29	1284821	PRJNA187313	187313	Proteobacteria	Gammaproteobacteria	5.42129	57.2	-	ARVQ01	176	5495	5311	6/5/13	2/21/17	Contig	JCVI	SAMN02141970	GCA_000409045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/045/GCA_000409045.1_gkp35v01	24913165	UHKPC29
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.23637	28.9	-	FACN01	1565	3970	3679	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664151	GCA_900014925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/925/GCA_900014925.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.11705	46.9	-	CWQG01	86	3831	3796	7/17/15	7/17/15	Scaffold	SC	SAMEA889357	GCA_001246285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/285/GCA_001246285.1_4056_8_6	-	A346(2)
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.60738	50.7	-	CWUP01	413	5301	4343	7/16/15	2/24/17	Scaffold	SC	SAMEA3345041	GCA_001261475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/475/GCA_001261475.1_H14150042501	-	42501ss_1
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.116	41.1	-	FIIA01	49	2156	2012	2/10/16	3/19/17	Contig	SC	SAMEA1316635	GCA_900065755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/755/GCA_900065755.1_7114_5_77	-	LSS77
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.15977	35.5	-	FJQV01	150	2205	2065	9/30/16	3/21/17	Contig	INSTITUT PASTEUR	SAMEA3888136	GCA_900073755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/755/GCA_900073755.1_SA96	-	-
Acinetobacter baumannii 44362_4	1311038	PRJNA195116	195116	Proteobacteria	Gammaproteobacteria	4.08882	39.1	-	JHCN01	119	4085	3768	3/26/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644713	GCA_000600495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/495/GCA_000600495.1_ASM60049v1	-	44362_4
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.04651	65.8	-	CVVP01	225	6779	6510	6/24/15	3/18/17	Contig	PHE	SAMEA3374624	GCA_001181125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/125/GCA_001181125.1_P36_West_Midlands_5_VIM_2_06_12	-	P36_West_Midlands_5_VIM_2_06_12
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15877	51.6	-	FFAS01	101	2498	2169	2/9/16	3/19/17	Scaffold	SC	SAMEA2674265	GCA_900033275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/275/GCA_900033275.1_14555_5_62	-	2842STDY5881403
Helicobacter pylori SA216C	1345598	PRJEB4109	216065	Proteobacteria	delta/epsilon subdivisions	1.63414	39.2	-	CBNC01	160	-	-	9/21/13	1/30/15	Contig	MHH	SAMEA2272700	GCA_000475635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/635/GCA_000475635.1_SA216C	23898187	SA216C
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05277	39.6	-	CODD02	167	2196	1984	3/23/15	3/11/17	Contig	SC	SAMEA1463098	GCA_001111065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/065/GCA_001111065.2_7622_4_12	-	LE4019
Escherichia coli KTE9	1169329	PRJNA157577	157577	Proteobacteria	Gammaproteobacteria	5.015	50.5	-	ANVJ01	4	4977	4725	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00847647	GCA_000352105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/105/GCA_000352105.1_Esch_coli_KTE9_V1	-	KTE9
Mycobacterium tuberculosis TKK-01-0013	1324229	PRJNA198114	198114	Terrabacteria group	Actinobacteria	4.4103	65.5	-	JLZI01	9	4299	4110	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053752	GCA_000660465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/465/GCA_000660465.1_Myco_tube_TKK-01-0013_V1	-	TKK-01-0013
Listeria monocytogenes	1639	PRJDB3369	317449	Terrabacteria group	Firmicutes	2.91507	37.9	-	BBRP01	46	2948	2750	4/1/16	3/1/17	Contig	Tokyo university of marine science and technology	SAMD00023518	GCA_001652935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/935/GCA_001652935.1_ASM165293v1	-	ATCC 19115 substr. PS10D
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.69616	30.4	-	MOUL01	19	1804	1707	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04338323	GCA_001877445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/445/GCA_001877445.1_ASM187744v1	-	CDPHFDLB-F15M00665P1
Salmonella enterica subsp. enterica serovar Enteritidis str. 607308-9	891412	PRJNA53261	53261	Proteobacteria	Gammaproteobacteria	4.72904	52	-	ALGP01	57	4858	4611	12/31/12	5/19/17	Contig	FDA	SAMN01041112	GCA_000329745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/745/GCA_000329745.1_ASM32974v1	23383127	607308-9
Staphylococcus aureus SJOS6003	1409456	PRJNA223776	223776	Terrabacteria group	Firmicutes	2.88533	32.8	-	JBSF01	20	3027	2854	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381517	GCA_000539295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/295/GCA_000539295.1_Stap_aure_SJOS6003_V1	-	SJOS6003
Staphylococcus aureus SJOS6002	1409457	PRJNA223777	223777	Terrabacteria group	Firmicutes	2.95994	32.9	-	JBSE01	27	3124	2945	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381518	GCA_000539315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/315/GCA_000539315.1_Stap_aure_SJOS6002_V1	-	SJOS6002
Salmonella enterica subsp. enterica serovar Enteritidis str. 629163	891414	PRJNA53265	53265	Proteobacteria	Gammaproteobacteria	4.7247	52	-	ALGQ01	65	4846	4583	12/31/12	5/19/17	Contig	FDA	SAMN01041115	GCA_000329765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/765/GCA_000329765.1_ASM32976v1	23383127	629163
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.68451	30.4	-	MOUK01	64	1810	1682	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN05163880	GCA_001877465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/465/GCA_001877465.1_ASM187746v1	-	CDPHFDLB-F15M00665P2
Listeria monocytogenes	1639	PRJDB3370	317450	Terrabacteria group	Firmicutes	2.90787	37.9	-	BBRQ01	63	2947	2647	4/1/16	4/17/17	Contig	Tokyo university of marine science and technology	SAMD00023519	GCA_001652955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/955/GCA_001652955.1_ASM165295v1	-	ATCC 19115 substr. PS37D
Mycobacterium tuberculosis TKK-01-0014	1324230	PRJNA198115	198115	Terrabacteria group	Actinobacteria	4.4173	65.6	-	JLZH01	13	4307	4127	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053753	GCA_000660485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/485/GCA_000660485.1_Myco_tube_TKK-01-0014_V1	-	TKK-01-0014
Escherichia coli KTE17	1169336	PRJNA157591	157591	Proteobacteria	Gammaproteobacteria	4.91547	50.4	-	ANVK01	3	4997	4727	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00847654	GCA_000352125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/125/GCA_000352125.1_Esch_coli_KTE17_V1	-	KTE17
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.02946	39.7	-	COFV02	120	2225	2020	3/22/15	3/5/17	Contig	SC	SAMEA1463063	GCA_001111205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/205/GCA_001111205.2_7622_5_95	-	ND6104
Helicobacter pylori SA252A	1345531	PRJEB4125	215926	Proteobacteria	delta/epsilon subdivisions	1.63615	39	-	CBNP01	59	-	-	9/21/13	1/30/15	Contig	MHH	SAMEA2272280	GCA_000475815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/815/GCA_000475815.1_SA252A	23898187	SA252A
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.2085	51.5	-	FFAU01	78	2595	2216	2/9/16	3/21/17	Scaffold	SC	SAMEA2674268	GCA_900033285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/285/GCA_900033285.1_14555_5_64	-	2842STDY5881405
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.10387	65.8	-	CVUJ01	193	6845	6590	6/23/15	3/18/17	Contig	PHE	SAMEA3374625	GCA_001181145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/145/GCA_001181145.1_P37_London_28_VIM_2_07_12	-	P37_London_28_VIM_2_07_12
Acinetobacter baumannii 44362_5	1311039	PRJNA195117	195117	Proteobacteria	Gammaproteobacteria	4.09432	39.1	-	JHCM01	123	4101	3787	3/26/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644714	GCA_000600515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/515/GCA_000600515.1_ASM60051v1	-	44362_5
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.15732	35.5	-	FJQU01	169	2189	2056	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888138	GCA_900073765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/765/GCA_900073765.1_SA98	-	-
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.03172	41.1	-	FIJV01	27	2027	1920	2/10/16	3/19/17	Contig	SC	SAMEA1316585	GCA_900065765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/765/GCA_900065765.1_7054_7_31	-	SS1026
Shigella sonnei	624	PRJEB2460	204320	Proteobacteria	Gammaproteobacteria	4.53586	50.8	-	CXFT01	367	4929	4341	7/16/15	2/24/17	Scaffold	SC	SAMEA1027684	GCA_001261495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/495/GCA_001261495.1_6350_1_4	-	sh03-0995
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.00422	47.2	-	CWPM01	81	3599	3552	7/16/15	7/16/15	Scaffold	SC	SAMEA889352	GCA_001248135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/135/GCA_001248135.1_4056_7_1	-	A186
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.13017	28.5	-	FAMI01	343	3755	3645	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664407	GCA_900014945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/945/GCA_900014945.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae DMC0526	1284796	PRJNA187288	187288	Proteobacteria	Gammaproteobacteria	5.55525	57.1	-	ARPO01	167	5615	5435	6/5/13	2/21/17	Contig	JCVI	SAMN02141996	GCA_000409065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/065/GCA_000409065.1_gkp10v01	24913165	DMC0526
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.14472	45.2	-	NIXX01	38	5059	4793	7/18/17	7/21/17	Contig	University of New Hampshire	SAMN06917275	GCA_002221285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/285/GCA_002221285.1_ASM222128v1	28687650	MAVP-67
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.093	37.5	-	FXIG01	202	3213	2979	4/26/17	5/6/17	Scaffold	SC	SAMEA3893565	GCA_900179575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/575/GCA_900179575.1_19789_6_62	-	VREN1774
Campylobacter coli	195	PRJNA294867	294867	Proteobacteria	delta/epsilon subdivisions	1.79245	31.3	-	LKCT01	26	1872	1755	3/3/16	3/19/17	Contig	North Carolina State University	SAMN04074750	GCA_001579505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/505/GCA_001579505.1_ASM157950v1	-	6461
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.80582	64.2	-	FVCR01	21	4752	4624	3/10/17	3/18/17	Scaffold	SC	SAMEA2259695	GCA_900131495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/495/GCA_900131495.1_11861_8_24	-	890
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.92046	64.1	-	FVDA01	12	4894	4738	3/10/17	3/18/17	Scaffold	SC	SAMEA2259665	GCA_900131505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/505/GCA_900131505.1_11893_6_24	-	860
Campylobacter coli	195	PRJNA294867	294867	Proteobacteria	delta/epsilon subdivisions	1.95771	30.9	-	LKCS01	77	2069	1925	3/3/16	3/19/17	Contig	North Carolina State University	SAMN04038076	GCA_001579565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/565/GCA_001579565.1_ASM157956v1	-	-
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.09529	37.5	-	FXIH01	199	3214	2983	4/26/17	5/6/17	Scaffold	SC	SAMEA3893564	GCA_900179585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/585/GCA_900179585.1_19789_6_61	-	VREN1773
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.03748	45.3	-	NIXZ01	52	4828	4565	7/18/17	7/21/17	Contig	University of New Hampshire	SAMN06917272	GCA_002221305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/305/GCA_002221305.1_ASM222130v1	28687650	MAVP-71
Klebsiella pneumoniae UHKPC48	1284801	PRJNA187293	187293	Proteobacteria	Gammaproteobacteria	5.62036	57.1	-	ARPP01	194	5697	5522	6/5/13	2/21/17	Contig	JCVI	SAMN02142018	GCA_000409085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/085/GCA_000409085.1_gkp15v01	24913165	UHKPC48
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.15175	28.7	-	CZYA01	924	3753	3598	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664030	GCA_900015015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/015/GCA_900015015.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.98737	46.7	-	CWPV01	188	5208	5178	7/16/15	7/16/15	Scaffold	SC	SAMEA889272	GCA_001248235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/235/GCA_001248235.1_4056_7_3	-	A217
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.98696	50.5	-	CWXR01	498	5857	4789	7/16/15	2/24/17	Scaffold	SC	SAMEA2434387	GCA_001261575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/575/GCA_001261575.1_12844_1_60	-	21156548
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	1.95772	41.3	-	FILA01	24	1960	1868	2/10/16	3/19/17	Contig	SC	SAMEA1316638	GCA_900065775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/775/GCA_900065775.1_7054_7_57	-	SS1066
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.15662	35.5	-	FJRA01	193	2185	2053	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888139	GCA_900073775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/775/GCA_900073775.1_SA99	-	-
Acinetobacter baumannii 44362_6	1311040	PRJNA195118	195118	Proteobacteria	Gammaproteobacteria	4.06095	38.9	-	JHCL01	192	4085	3768	3/26/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644721	GCA_000600535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/535/GCA_000600535.1_ASM60053v1	-	44362_6
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.06304	65.8	-	CVUT01	201	6784	6520	6/24/15	3/18/17	Contig	PHE	SAMEA3374626	GCA_001181165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/165/GCA_001181165.1_P38_London_12_VIM_2_08_12	-	P38_London_12_VIM_2_08_12
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12776	51.8	-	FFAW01	77	2494	2162	2/9/16	3/19/17	Scaffold	SC	SAMEA2674272	GCA_900033295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/295/GCA_900033295.1_14555_5_66	-	2842STDY5881407
Helicobacter pylori SA163A	1345566	PRJEB4077	216035	Proteobacteria	delta/epsilon subdivisions	1.61645	39.1	-	CBOG01	48	-	-	9/21/13	1/30/15	Contig	MHH	SAMEA2272670	GCA_000475835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/835/GCA_000475835.1_SA163A	23898187	SA163A
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.01277	39.6	-	CNXL02	123	2183	1988	3/23/15	3/11/17	Contig	SC	SAMEA1032717	GCA_001111245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/245/GCA_001111245.2_7001_3_18	-	R34-3155
Escherichia coli KTE18	1169337	PRJNA157593	157593	Proteobacteria	Gammaproteobacteria	4.92586	50.5	-	ANVL01	8	5020	4741	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00847655	GCA_000352145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/145/GCA_000352145.1_Esch_coli_KTE18_V1	-	KTE18
Mycobacterium tuberculosis TKK-01-0015	1324231	PRJNA198116	198116	Terrabacteria group	Actinobacteria	4.40828	65.5	-	JLZG01	14	4274	4096	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053754	GCA_000660505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/505/GCA_000660505.1_Myco_tube_TKK-01-0015_V1	-	TKK-01-0015
Listeria monocytogenes	1639	PRJDB3368	317448	Terrabacteria group	Firmicutes	2.89313	37.9	-	BBRR01	71	2940	2675	4/1/16	4/17/17	Contig	Tokyo university of marine science and technology	SAMD00023520	GCA_001652975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/975/GCA_001652975.1_ASM165297v1	-	ATCC 19115
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.69631	30.4	-	MOUJ01	18	1800	1704	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04338324	GCA_001877495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/495/GCA_001877495.1_ASM187749v1	-	CDPHFDLB-F15M00667P1
Salmonella enterica subsp. enterica serovar Enteritidis str. SE15-1	925126	PRJNA59987	59987	Proteobacteria	Gammaproteobacteria	4.69236	52.1	-	ALGR01	65	4813	4552	12/31/12	5/19/17	Contig	FDA	SAMN01041178	GCA_000329785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/785/GCA_000329785.1_ASM32978v1	23383127	SE15-1
Staphylococcus aureus SJOS6001	1409458	PRJNA223778	223778	Terrabacteria group	Firmicutes	2.93266	32.7	-	JBSD01	16	3084	2928	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381519	GCA_000539335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/335/GCA_000539335.1_Stap_aure_SJOS6001_V1	-	SJOS6001
Staphylococcus aureus SJOS6004	1409459	PRJNA223779	223779	Terrabacteria group	Firmicutes	2.88804	32.8	-	JBSC01	40	3005	2855	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381520	GCA_000539355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/355/GCA_000539355.1_Stap_aure_SJOS6004_V1	-	SJOS6004
Salmonella enterica subsp. enterica serovar Enteritidis str. CVM_N202	925127	PRJNA59989	59989	Proteobacteria	Gammaproteobacteria	4.69536	52.1	-	ALGS01	44	4812	4546	12/31/12	5/19/17	Contig	FDA	SAMN01041163	GCA_000329805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/805/GCA_000329805.1_ASM32980v1	23383127	CVM_N202
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.68876	30.4	-	MOUI01	79	1807	1690	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN05163881	GCA_001877515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/515/GCA_001877515.1_ASM187751v1	-	CDPHFDLB-F15M00667P3
Listeria monocytogenes	1639	PRJNA320339	320339	Terrabacteria group	Firmicutes	2.98309	37.8	-	LXQZ01	46	3025	2941	6/6/16	3/1/17	Contig	CSIRO	SAMN04932629	GCA_001658335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/335/GCA_001658335.1_ASM165833v1	-	3002
Mycobacterium tuberculosis TKK-01-0016	1324232	PRJNA198117	198117	Terrabacteria group	Actinobacteria	4.39856	65.6	-	JLZF01	7	4292	4128	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053755	GCA_000660525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/525/GCA_000660525.1_Myco_tube_TKK-01-0016_V1	-	TKK-01-0016
Escherichia coli KTE45	1169362	PRJNA157643	157643	Proteobacteria	Gammaproteobacteria	4.86063	50.6	-	ANVM01	3	4996	4738	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00847680	GCA_000352165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/165/GCA_000352165.1_Esch_coli_KTE45_V1	-	KTE45
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06928	39.6	-	COEJ02	141	2226	2019	3/22/15	3/5/17	Contig	SC	SAMEA1463160	GCA_001111325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/325/GCA_001111325.2_7622_4_9	-	LE4011
Helicobacter pylori SA46C	1345536	PRJEB4056	216003	Proteobacteria	delta/epsilon subdivisions	1.60759	39.1	-	CBOD01	47	-	-	9/21/13	1/30/15	Contig	MHH	SAMEA2272551	GCA_000475875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/875/GCA_000475875.1_SA46C	23898187	SA46C
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11168	51.8	-	FFCA01	74	2445	2111	2/9/16	3/21/17	Scaffold	SC	SAMEA2674120	GCA_900033305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/305/GCA_900033305.1_14555_6_1	-	2842STDY5881438
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.08563	65.7	-	CVVC01	178	6840	6581	6/23/15	3/18/17	Contig	PHE	SAMEA3374627	GCA_001181185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/185/GCA_001181185.1_P39_London_29_08_12	-	P39_London_29_08_12
Acinetobacter baumannii 44362_7	1311041	PRJNA195119	195119	Proteobacteria	Gammaproteobacteria	4.11881	39.1	-	JHCK01	144	4103	3815	3/26/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644722	GCA_000600555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/555/GCA_000600555.1_ASM60055v1	-	44362_7
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.15779	35.5	-	FJQY01	162	2191	2059	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888135	GCA_900073785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/785/GCA_900073785.1_SA95	-	-
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.03159	41.2	-	FILH01	24	2026	1919	2/10/16	3/19/17	Contig	SC	SAMEA1316632	GCA_900065785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/785/GCA_900065785.1_7054_7_7	-	SS972
Shigella sonnei	624	PRJEB2460	204320	Proteobacteria	Gammaproteobacteria	4.62768	50.8	-	CXFR01	385	5035	4463	7/16/15	2/24/17	Scaffold	SC	SAMEA1027729	GCA_001261595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/595/GCA_001261595.1_6350_1_20	-	sh03-1382
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.97266	47	-	CWQB01	96	3632	3585	7/16/15	7/16/15	Scaffold	SC	SAMEA889214	GCA_001248365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/365/GCA_001248365.1_4056_8_3	-	A397
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.19556	28.9	-	CZZH01	1273	3789	3632	3/31/16	4/10/17	Contig	UNIVERSITE LAVAL	SAMEA3664065	GCA_900015025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/025/GCA_900015025.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae UHKPC32	1284822	PRJNA187314	187314	Proteobacteria	Gammaproteobacteria	5.62148	57.1	-	ARPQ01	202	5708	5520	6/5/13	2/21/17	Contig	JCVI	SAMN02142001	GCA_000409105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/105/GCA_000409105.1_gkp36v01	24913165	UHKPC32
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.14045	45.2	-	NJHI01	180	4941	4646	7/18/17	7/21/17	Contig	University of New Hampshire	SAMN05713801	GCA_002221325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/325/GCA_002221325.1_ASM222132v1	28687650	MEVP14
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.09314	37.5	-	FXII01	202	3210	2980	4/26/17	5/6/17	Scaffold	SC	SAMEA3893567	GCA_900179595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/595/GCA_900179595.1_19789_6_63	-	VREN1775
Campylobacter coli	195	PRJNA318413	318413	Proteobacteria	delta/epsilon subdivisions	1.85543	31.4	-	LWIH01	324	1919	1789	4/18/16	3/20/17	Contig	PLNW	SAMN04851146	GCA_001622185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/185/GCA_001622185.1_ASM162218v1	27257607	20G12
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.72585	64.3	-	FVCU01	10	4716	4577	3/10/17	3/18/17	Scaffold	SC	SAMEA2259642	GCA_900131515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/515/GCA_900131515.1_11893_6_4	-	837
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.84575	64.2	-	FVCV01	14	4867	4721	3/10/17	3/18/17	Scaffold	SC	SAMEA2259687	GCA_900131525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/525/GCA_900131525.1_11893_6_44	-	882
Campylobacter coli	195	PRJNA335434	335434	Proteobacteria	delta/epsilon subdivisions	1.77608	31.6	-	MCFT01	416	1743	1655	8/14/16	3/20/17	Contig	PLNW	SAMN05442759	GCA_001704895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/895/GCA_001704895.1_ASM170489v1	-	20A_420
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.0966	37.5	-	FXIR01	198	3221	2974	4/26/17	5/6/17	Scaffold	SC	SAMEA3893568	GCA_900179605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/605/GCA_900179605.1_19789_6_64	-	VREN1776
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.1681	45.2	-	NJHJ01	55	5045	4807	7/18/17	7/21/17	Contig	University of New Hampshire	SAMN05713800	GCA_002221345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/345/GCA_002221345.1_ASM222134v1	28687650	MEVP12
Klebsiella pneumoniae UHKPC57	1284817	PRJNA187309	187309	Proteobacteria	Gammaproteobacteria	5.67125	56.9	-	ARPR01	246	5644	5410	6/5/13	2/21/17	Contig	JCVI	SAMN02142020	GCA_000409125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/125/GCA_000409125.1_gkp31v01	24913165	UHKPC57
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.18155	29	-	FABB01	1492	3793	3590	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664114	GCA_900015035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/035/GCA_900015035.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.97474	47.3	-	CWRC01	336	3931	3902	7/16/15	7/16/15	Scaffold	SC	SAMEA889196	GCA_001248845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/845/GCA_001248845.1_4075_3_10	-	PRL18
Shigella sonnei	624	PRJEB2976	204795	Proteobacteria	Gammaproteobacteria	4.55888	50.8	-	CWYB01	376	5033	4353	7/17/15	2/24/17	Scaffold	SC	SAMEA2445701	GCA_001261615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/615/GCA_001261615.1_12971_8_21	-	H085220503
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.03863	41.2	-	FION01	28	2050	1931	2/10/16	3/19/17	Contig	SC	SAMEA1566164	GCA_900065795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/795/GCA_900065795.1_8337_6_61	-	EN171
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.14079	35.4	-	FJQR01	125	2189	2060	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888133	GCA_900073795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/795/GCA_900073795.1_SA93	-	-
Acinetobacter baumannii 44362_8	1311042	PRJNA195120	195120	Proteobacteria	Gammaproteobacteria	4.22167	39.1	-	JHCJ01	107	4225	3952	3/26/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644723	GCA_000600575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/575/GCA_000600575.1_ASM60057v1	-	44362_8
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.36916	65.4	-	CVUM01	178	7185	6925	6/24/15	3/18/17	Contig	PHE	SAMEA3374628	GCA_001181205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/205/GCA_001181205.1_P40_Scotland_4_VIM_2_09_12	-	P40_Scotland_4_VIM_2_09_12
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.10666	51.8	-	FFCI01	75	2412	2079	2/9/16	3/21/17	Scaffold	SC	SAMEA2674148	GCA_900033315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/315/GCA_900033315.1_14555_6_10	-	2842STDY5881447
Helicobacter pylori SA210A	1345590	PRJEB4101	216086	Proteobacteria	delta/epsilon subdivisions	1.65892	38.9	-	CBNW01	45	-	-	9/21/13	1/30/15	Contig	MHH	SAMEA2272576	GCA_000475995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/475/995/GCA_000475995.1_SA210A	23898187	SA210A
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.13345	39.7	-	CMMS01	51	2315	2101	3/23/15	3/4/17	Contig	SC	SAMEA1029428	GCA_001111365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/365/GCA_001111365.1_7068_4_20	-	SMRU3140
Escherichia coli KTE42	1169359	PRJNA157637	157637	Proteobacteria	Gammaproteobacteria	4.8483	50.8	-	ANVN01	4	4966	4621	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00847677	GCA_000352185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/185/GCA_000352185.1_Esch_coli_KTE42_V1	-	KTE42
Mycobacterium tuberculosis TKK-01-0018	1324233	PRJNA198118	198118	Terrabacteria group	Actinobacteria	4.44923	65.5	-	JLZD01	6	4313	4102	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053756	GCA_000660545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/545/GCA_000660545.1_Myco_tube_TKK-01-0018_V1	-	TKK-01-0018
Listeria monocytogenes	1639	PRJNA320339	320339	Terrabacteria group	Firmicutes	2.95335	38	-	LXRC01	34	3017	2927	6/6/16	3/1/17	Contig	CSIRO	SAMN04932632	GCA_001658405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/405/GCA_001658405.1_ASM165840v1	-	Lm15-027
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.69568	30.4	-	MOUH01	19	1804	1706	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04338325	GCA_001877525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/525/GCA_001877525.1_ASM187752v1	-	CDPHFDLB-F15M00668P1
Salmonella enterica subsp. enterica serovar Enteritidis str. CVM_56-3991	925128	PRJNA59991	59991	Proteobacteria	Gammaproteobacteria	4.69615	52.1	-	ALGT01	51	4812	4553	12/31/12	5/19/17	Contig	FDA	SAMN01041100	GCA_000329825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/825/GCA_000329825.1_ASM32982v1	23383127	CVM_56-3991
Staphylococcus aureus HOAG6005	1409460	PRJNA223780	223780	Terrabacteria group	Firmicutes	2.8743	32.8	-	JBSB01	33	3008	2841	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381521	GCA_000539375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/375/GCA_000539375.1_Stap_aure_HOAG6005_V1	-	HOAG6005
Staphylococcus aureus AMMC6002	1409461	PRJNA223781	223781	Terrabacteria group	Firmicutes	2.89625	32.7	-	JBSA01	11	3053	2890	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381522	GCA_000539395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/395/GCA_000539395.1_Stap_aure_AMMC6002_V1	-	AMMC6002
Salmonella enterica subsp. enterica serovar Enteritidis str. CVM_76-3618	925129	PRJNA59993	59993	Proteobacteria	Gammaproteobacteria	4.68436	52.1	-	ALGU01	104	4820	4488	12/31/12	5/19/17	Contig	FDA	SAMN01041141	GCA_000329845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/845/GCA_000329845.1_ASM32984v1	23383127	CVM_76-3618
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.6957	30.4	-	MOUF01	16	1800	1708	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04338326	GCA_001877555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/555/GCA_001877555.1_ASM187755v1	-	CDPHFDLB-F15M00669P1
Listeria monocytogenes	1639	PRJNA266291	266291	Terrabacteria group	Firmicutes	2.99821	37.9	-	LZNK01	81	3065	2973	7/14/16	3/1/17	Contig	Health Canada	SAMN03160826	GCA_001685215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/685/215/GCA_001685215.1_ASM168521v1	-	HPB913
Mycobacterium tuberculosis TKK-01-0019	1324234	PRJNA198119	198119	Terrabacteria group	Actinobacteria	4.41093	65.5	-	JLZC01	5	4303	4119	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053757	GCA_000660565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/565/GCA_000660565.1_Myco_tube_TKK-01-0019_V1	-	TKK-01-0019
Escherichia coli KTE23	1169342	PRJNA157603	157603	Proteobacteria	Gammaproteobacteria	4.87693	50.5	-	ANVO01	6	4974	4702	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00847660	GCA_000352205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/205/GCA_000352205.1_Esch_coli_KTE23_V1	-	KTE23
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0641	39.6	-	CODV02	116	2260	2054	3/22/15	3/5/17	Contig	SC	SAMEA1463247	GCA_001111485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/485/GCA_001111485.2_7622_4_32	-	LE4100
Helicobacter pylori SA227A	1345520	PRJEB4119	215917	Proteobacteria	delta/epsilon subdivisions	1.66205	39	-	CBNX01	65	-	-	9/21/13	1/30/15	Contig	MHH	SAMEA2272662	GCA_000476035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/035/GCA_000476035.1_SA227A	23898187	SA227A
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16983	51.6	-	FFCJ01	63	2519	2171	2/9/16	3/19/17	Scaffold	SC	SAMEA2674151	GCA_900033325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/325/GCA_900033325.1_14555_6_11	-	2842STDY5881448
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.16893	65.8	-	CVVR01	202	6936	6670	6/24/15	3/18/17	Contig	PHE	SAMEA3374629	GCA_001181225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/225/GCA_001181225.1_P41_London_28_09_12	-	P41_London_28_09_12
Acinetobacter baumannii 44362_9	1311043	PRJNA195121	195121	Proteobacteria	Gammaproteobacteria	4.068	39.2	-	JHCI01	105	4025	3720	3/26/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644724	GCA_000600595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/595/GCA_000600595.1_ASM60059v1	-	44362_9
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.14085	35.6	-	FJQI01	87	2182	2090	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888273	GCA_900073805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/805/GCA_900073805.1_VSA10	-	-
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.12207	41.1	-	FIOP01	21	2161	2029	2/10/16	3/19/17	Contig	SC	SAMEA1566208	GCA_900065805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/805/GCA_900065805.1_8337_6_64	-	EN251
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.98256	50.5	-	CWYA01	474	5803	4792	7/16/15	2/24/17	Scaffold	SC	SAMEA2434376	GCA_001261635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/635/GCA_001261635.1_12850_1_49	-	20177848
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.00606	47.2	-	CWPN01	77	3526	3470	7/16/15	7/16/15	Scaffold	SC	SAMEA889364	GCA_001248865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/865/GCA_001248865.1_4056_7_11	-	A193
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.08396	28.5	-	FAHH01	308	3745	3630	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664274	GCA_900015045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/045/GCA_900015045.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae ATCC 25955	1316938	PRJNA196563	196563	Proteobacteria	Gammaproteobacteria	5.29247	57.4	-	AQQH01	87	5280	5034	6/10/13	2/20/17	Contig	"State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University"	SAMN02470961	GCA_000409715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/715/GCA_000409715.1_Klebsiella_pneumoniae_ATCC_25955_Genome_sequencing	23929480	ATCC 25955
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.22867	45.2	-	NJHK01	45	5108	4867	7/18/17	7/21/17	Contig	University of New Hampshire	SAMN05713799	GCA_002221365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/365/GCA_002221365.1_ASM222136v1	28687650	CTVP34C
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.09398	37.5	-	FXIQ01	197	3217	2979	4/26/17	5/6/17	Scaffold	SC	SAMEA3893573	GCA_900179615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/615/GCA_900179615.1_19789_6_66	-	VREN1779
Campylobacter coli	195	PRJNA335433	335433	Proteobacteria	delta/epsilon subdivisions	1.75257	31.3	-	MCFS01	181	1782	1659	8/14/16	3/20/17	Contig	PLNW	SAMN05442758	GCA_001704905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/905/GCA_001704905.1_ASM170490v1	-	FNWR7B4_44
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.84599	64.2	-	FVDD01	10	4858	4717	3/10/17	3/18/17	Scaffold	SC	SAMEA2259688	GCA_900131535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/535/GCA_900131535.1_11893_6_45	-	883
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.72308	64.3	-	FVDB01	11	4710	4573	3/10/17	3/18/17	Scaffold	SC	SAMEA2259643	GCA_900131545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/545/GCA_900131545.1_11893_6_5	-	838
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.73159	31.4	-	MJYP01	48	1795	1692	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532383	GCA_001763365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/365/GCA_001763365.1_ASM176336v1	-	BCW_6860
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.0952	37.5	-	FXIM01	196	3222	2977	4/26/17	5/6/17	Scaffold	SC	SAMEA3893576	GCA_900179625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/625/GCA_900179625.1_19789_6_67	-	VREN1781
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.27344	45.2	-	NJHL01	43	5154	4927	7/18/17	7/21/17	Contig	University of New Hampshire	SAMN05713798	GCA_002221385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/385/GCA_002221385.1_ASM222138v1	28687650	CTVP31C
Klebsiella pneumoniae G5-2	1316939	PRJNA196568	196568	Proteobacteria	Gammaproteobacteria	5.29269	57.4	-	AQQI01	107	5286	5041	6/10/13	2/21/17	Contig	"State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University"	SAMN02470962	GCA_000409735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/735/GCA_000409735.1_Klebsiella_pneumonia_G5-2_Genome_sequencing	-	G5-2
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.16513	28.7	-	FAIE01	943	3786	3609	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664296	GCA_900015055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/055/GCA_900015055.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.94392	47.3	-	CWPS01	79	3572	3519	7/16/15	7/16/15	Scaffold	SC	SAMEA889274	GCA_001248945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/248/945/GCA_001248945.1_4056_7_5	-	A213
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.75313	50.6	-	CXEX01	431	5219	4554	7/16/15	2/24/17	Scaffold	SC	SAMEA954825	GCA_001261655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/655/GCA_001261655.1_5417_3_5	-	20010007_1361421
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.08802	41.2	-	FIPV01	23	2120	2006	2/10/16	3/19/17	Contig	SC	SAMEA1566149	GCA_900065815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/815/GCA_900065815.1_8525_5_34	-	SS29
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.19896	35.6	-	FJQW01	143	2233	2098	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888137	GCA_900073815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/815/GCA_900073815.1_SA97	-	-
Acinetobacter baumannii 44437_3	1311027	PRJNA195105	195105	Proteobacteria	Gammaproteobacteria	4.04708	39.3	-	JHCH01	97	4009	3737	3/26/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644725	GCA_000600615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/615/GCA_000600615.1_ASM60061v1	-	44437_3
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.18805	65.8	-	CVWH01	184	6942	6689	6/23/15	3/18/17	Contig	PHE	SAMEA3374630	GCA_001181245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/245/GCA_001181245.1_P42_1_London_26_VIM_2_10_12	-	P42_1_London_26_VIM_2_10_12
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.14973	51.6	-	FFCV01	94	2481	2151	2/9/16	3/19/17	Scaffold	SC	SAMEA2674189	GCA_900033335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/335/GCA_900033335.1_14555_6_23	-	2842STDY5881460
Helicobacter pylori SA224A	1345512	PRJEB4116	216070	Proteobacteria	delta/epsilon subdivisions	1.64515	39	-	CBOB01	55	-	-	9/21/13	1/30/15	Contig	MHH	SAMEA2272789	GCA_000476095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/095/GCA_000476095.1_SA224A	23898187	SA224A
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.06631	39.5	-	CLJY01	45	2305	2056	3/21/15	3/6/17	Contig	SC	SAMEA1028691	GCA_001111705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/705/GCA_001111705.1_6925_8_23	-	SMRU2543
Escherichia coli KTE43	1169360	PRJNA157639	157639	Proteobacteria	Gammaproteobacteria	5.04442	50.6	-	ANVP01	5	5105	4795	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00847678	GCA_000352225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/225/GCA_000352225.1_Esch_coli_KTE43_V1	-	KTE43
Mycobacterium tuberculosis TKK-01-0022	1324235	PRJNA198120	198120	Terrabacteria group	Actinobacteria	4.41844	65.5	-	JLYZ01	5	4293	4126	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053758	GCA_000660585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/585/GCA_000660585.1_Myco_tube_TKK-01-0022_V1	-	TKK-01-0022
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.02828	37.8	-	MDEU01	14	3094	2996	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410577	GCA_001708675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/675/GCA_001708675.1_ASM170867v1	-	Lm23
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.68705	30.4	-	MOUE01	83	1810	1697	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN05163883	GCA_001877575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/575/GCA_001877575.1_ASM187757v1	-	CDPHFDLB-F15M00669P5
Salmonella enterica subsp. enterica serovar Enteritidis str. CVM_81-2490	925131	PRJNA59997	59997	Proteobacteria	Gammaproteobacteria	4.68492	52.1	-	ALGW01	63	4803	4549	12/31/12	5/19/17	Contig	FDA	SAMN01041146	GCA_000329885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/885/GCA_000329885.1_ASM32988v1	23383127	CVM_81-2490
Staphylococcus aureus AMMC6003	1409462	PRJNA223782	223782	Terrabacteria group	Firmicutes	2.93999	32.8	-	JBRZ01	19	3115	2951	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381523	GCA_000539415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/415/GCA_000539415.1_Stap_aure_AMMC6003_V1	-	AMMC6003
Staphylococcus aureus AMMC6007	1409463	PRJNA223783	223783	Terrabacteria group	Firmicutes	2.87045	32.8	-	JBRY01	46	2993	2824	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381524	GCA_000539435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/435/GCA_000539435.1_Stap_aure_AMMC6007_V1	-	AMMC6007
Salmonella enterica subsp. enterica serovar Enteritidis str. SL909	925132	PRJNA59999	59999	Proteobacteria	Gammaproteobacteria	4.72083	52.1	-	ALGX01	65	4838	4594	12/31/12	5/19/17	Contig	FDA	SAMN01041180	GCA_000329905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/905/GCA_000329905.1_ASM32990v1	23383127	SL909
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.65409	30.4	-	MOUD01	41	1761	1644	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04442370	GCA_001877595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/595/GCA_001877595.1_ASM187759v1	-	CDPHFDLB-F15M01862-A
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.04712	37.7	-	MDEV01	39	3132	3039	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410353	GCA_001708685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/685/GCA_001708685.1_ASM170868v1	-	Lm4
Mycobacterium tuberculosis TKK-01-0024	1324236	PRJNA198121	198121	Terrabacteria group	Actinobacteria	4.37152	65.6	-	JLYX01	9	4262	4066	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053759	GCA_000660605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/605/GCA_000660605.1_Myco_tube_TKK-01-0024_V1	-	TKK-01-0024
Escherichia coli KTE29	1169348	PRJNA157615	157615	Proteobacteria	Gammaproteobacteria	4.77548	50.8	-	ANVQ01	3	4823	4550	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00847666	GCA_000352245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/245/GCA_000352245.1_Esch_coli_KTE29_V1	-	KTE29
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.98359	39.7	-	CNSV02	124	2182	1969	3/23/15	3/11/17	Contig	SC	SAMEA1032459	GCA_001111765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/765/GCA_001111765.2_6999_3_22	-	72511
Helicobacter pylori SA47C	1345543	PRJEB4058	216009	Proteobacteria	delta/epsilon subdivisions	1.66962	38.4	-	CBPB01	29	-	-	9/21/13	1/30/15	Contig	MHH	SAMEA2272446	GCA_000476355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/355/GCA_000476355.1_SA47C	23898187	SA47C
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15809	51.5	-	FFDM01	89	2508	2133	2/9/16	3/21/17	Scaffold	SC	SAMEA2674229	GCA_900033345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/345/GCA_900033345.1_14555_6_38	-	2842STDY5881475
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.13304	65.8	-	CVWJ01	189	6923	6664	6/23/15	3/18/17	Contig	PHE	SAMEA3374631	GCA_001181265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/265/GCA_001181265.1_P43_1_London_9_VIM_2_11_12	-	P43_1_London_9_VIM_2_11_12
Acinetobacter baumannii 44437_4	1311028	PRJNA195106	195106	Proteobacteria	Gammaproteobacteria	4.03928	39.2	-	JHCG01	105	3986	3721	3/26/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644726	GCA_000600635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/635/GCA_000600635.1_ASM60063v1	-	44437_4
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.08414	35.4	-	FJQZ01	142	2126	2010	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888252	GCA_900073825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/825/GCA_900073825.1_VSA100	-	-
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.10635	41	-	FISV01	25	2113	1989	2/10/16	3/19/17	Contig	SC	SAMEA1566033	GCA_900065825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/825/GCA_900065825.1_8525_5_2	-	FX211
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.94977	50.4	-	CXLQ01	439	5597	4742	7/16/15	2/24/17	Scaffold	SC	SAMEA2004914	GCA_001261675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/675/GCA_001261675.1_8290_5_14	-	29022762
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.95229	47.3	-	CWPR01	54	3488	3437	7/17/15	7/17/15	Scaffold	SC	SAMEA889273	GCA_001249195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/195/GCA_001249195.1_4056_7_4	-	A215
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.50811	29.1	-	FAKR01	1302	4157	3975	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664363	GCA_900015065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/065/GCA_900015065.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae subsp. pneumoniae B5055	1267512	PRJNA183167	183167	Proteobacteria	Gammaproteobacteria	5.52487	56.8	-	AQCG01	1858	6102	4908	6/19/13	2/21/17	Contig	University of Melbourne	SAMN01999147	GCA_000412575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/575/GCA_000412575.2_B5055.1	-	B5055
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.25761	45.2	-	NJHM01	36	5137	4907	7/18/17	7/21/17	Contig	University of New Hampshire	SAMN05713797	GCA_002221395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/395/GCA_002221395.1_ASM222139v1	28687650	CTVP27C
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.09587	37.5	-	FXIO01	195	3211	2976	4/26/17	5/6/17	Scaffold	SC	SAMEA3893572	GCA_900179635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/635/GCA_900179635.1_19789_6_65	-	VREN1778
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.82774	31.2	-	MJZH01	43	1928	1820	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532410	GCA_001763715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/715/GCA_001763715.1_ASM176371v1	-	BCW_6914
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82878	64.2	-	FVCS01	6	4813	4700	3/10/17	3/18/17	Scaffold	SC	SAMEA1967392	GCA_900131585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/585/GCA_900131585.1_10665_4_16	-	271
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21905	64	-	FSAZ01	36	5326	5179	12/14/16	3/21/17	Scaffold	SC	SAMEA2259581	GCA_900131785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/785/GCA_900131785.1_11861_7_45	-	776
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.82365	31.2	-	MJZJ01	43	1927	1801	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532426	GCA_001763775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/775/GCA_001763775.1_ASM176377v1	-	BCW_6949
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.1974	37.4	-	FXIL01	207	3347	3097	4/26/17	5/6/17	Scaffold	SC	SAMEA3893585	GCA_900179645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/645/GCA_900179645.1_19789_6_72	-	VREN1802
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.15681	45.2	-	NIXW01	43	4982	4722	7/18/17	7/21/17	Contig	University of New Hampshire	SAMN06917276	GCA_002221425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/425/GCA_002221425.1_ASM222142v1	28687650	MAVP-99
Klebsiella pneumoniae UHKPC59	1284803	PRJNA187295	187295	Proteobacteria	Gammaproteobacteria	5.66789	57	-	ARSE01	213	5761	5565	7/1/13	2/21/17	Contig	JCVI	SAMN02142021	GCA_000417045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/045/GCA_000417045.1_gkp17v01	24913165	UHKPC59
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.24416	29	-	FAMQ01	1427	3846	3625	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664413	GCA_900015075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/075/GCA_900015075.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.06031	47.4	-	CWNO01	110	3706	3667	7/17/15	7/17/15	Scaffold	SC	SAMEA889152	GCA_001249815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/249/815/GCA_001249815.1_4370_3_1	-	7682
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.69247	50.6	-	CWWZ01	537	5238	4429	7/16/15	2/24/17	Scaffold	SC	SAMEA2434365	GCA_001261695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/695/GCA_001261695.1_12830_1_38	-	KY 1629
Streptococcus suis	1307	PRJEB20417	396525	Terrabacteria group	Firmicutes	2.03649	41.2	-	FWZS01	34	2057	1939	7/31/17	8/7/17	Contig	ACADEMIC MEDICAL CENTER	SAMEA103980380	GCA_900177235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/235/GCA_900177235.1_2150651	-	2150651
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.08334	35.5	-	FJRC01	159	2127	2011	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888253	GCA_900073835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/835/GCA_900073835.1_VSA101	-	-
Acinetobacter baumannii 44437_5	1311029	PRJNA195107	195107	Proteobacteria	Gammaproteobacteria	4.04084	39.3	-	JHCF01	109	4003	3714	3/26/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644727	GCA_000600655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/655/GCA_000600655.1_ASM60065v1	-	44437_5
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.13474	65.8	-	CVWI01	178	6876	6626	6/23/15	3/18/17	Contig	PHE	SAMEA3374633	GCA_001181285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/285/GCA_001181285.1_P42_2_London_28_VIM_2_11_12	-	P42_2_London_28_VIM_2_11_12
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.07631	51.9	-	FFDL01	88	2366	2048	2/9/16	3/21/17	Scaffold	SC	SAMEA2674231	GCA_900033355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/355/GCA_900033355.1_14555_6_39	-	2842STDY5881476
Helicobacter pylori SA146C	1345547	PRJEB4062	216081	Proteobacteria	delta/epsilon subdivisions	1.67238	38.9	-	CBPF01	46	-	-	9/21/13	1/30/15	Contig	MHH	SAMEA2272060	GCA_000476375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/375/GCA_000476375.1_SA146C	23898187	SA146C
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.03041	39.6	-	CMJH01	56	2226	2022	3/23/15	3/11/17	Contig	SC	SAMEA1029370	GCA_001111785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/785/GCA_001111785.1_7038_7_9	-	SMRU3009
Escherichia coli KTE22	1169341	PRJNA157601	157601	Proteobacteria	Gammaproteobacteria	5.14179	50.5	-	ANVR01	6	5303	5001	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00847659	GCA_000352265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/265/GCA_000352265.1_Esch_coli_KTE22_V1	-	KTE22
Mycobacterium tuberculosis TKK-01-0025	1324237	PRJNA198122	198122	Terrabacteria group	Actinobacteria	4.40904	65.6	-	JLYW01	1	4286	4115	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053760	GCA_000660625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/625/GCA_000660625.1_Myco_tube_TKK-01-0025_V1	-	TKK-01-0025
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.01479	37.8	-	MDFB01	24	3087	2999	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410636	GCA_001708705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/705/GCA_001708705.1_ASM170870v1	-	Lm87
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.65327	30.5	-	MOUC01	72	1762	1635	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN05163884	GCA_001877615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/615/GCA_001877615.1_ASM187761v1	-	CDPHFDLB-F15M01862-B
Salmonella enterica subsp. enterica serovar Enteritidis str. SL913	925133	PRJNA60001	60001	Proteobacteria	Gammaproteobacteria	4.69116	52.1	-	ALGY01	56	4805	4553	12/31/12	5/19/17	Contig	FDA	SAMN01041181	GCA_000329925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/925/GCA_000329925.1_ASM32992v1	23383127	SL913
Staphylococcus aureus AMMC6011	1409464	PRJNA223784	223784	Terrabacteria group	Firmicutes	2.91942	32.7	-	JBRX01	19	3085	2921	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381525	GCA_000539455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/455/GCA_000539455.1_Stap_aure_AMMC6011_V1	-	AMMC6011
Staphylococcus aureus AMMC6008	1409465	PRJNA223785	223785	Terrabacteria group	Firmicutes	2.92757	32.7	-	JBRW01	15	3097	2931	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381526	GCA_000539475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/475/GCA_000539475.1_Stap_aure_AMMC6008_V1	-	AMMC6008
Salmonella enterica subsp. enterica serovar Enteritidis str. CVM_69-4941	930768	PRJNA60509	60509	Proteobacteria	Gammaproteobacteria	4.69272	52.1	-	ALGZ01	69	4816	4543	12/31/12	5/19/17	Contig	FDA	SAMN01041139	GCA_000329945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/945/GCA_000329945.1_ASM32994v1	23383127	CVM_69-4941
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.65934	30.4	-	MOTW01	30	1761	1657	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04442372	GCA_001877625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/625/GCA_001877625.1_ASM187762v1	-	CDPHFDLB-F15M01909
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.00319	37.8	-	MDEZ01	24	3075	2997	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410590	GCA_001708755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/755/GCA_001708755.1_ASM170875v1	-	Lm76
Mycobacterium tuberculosis TKK-01-0027	1324238	PRJNA198123	198123	Terrabacteria group	Actinobacteria	4.42388	65.4	-	JLYU01	14	4288	4100	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053761	GCA_000660645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/645/GCA_000660645.1_Myco_tube_TKK-01-0027_V1	-	TKK-01-0027
Escherichia coli KTE46	1182653	PRJNA164849	164849	Proteobacteria	Gammaproteobacteria	4.87853	50.6	-	ANVS01	4	4998	4736	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854605	GCA_000352285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/285/GCA_000352285.1_Esch_coli_KTE46_V1	-	KTE46
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.1174	39.5	-	CNNH02	177	2298	2086	3/22/15	3/11/17	Contig	SC	SAMEA1032482	GCA_001111805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/805/GCA_001111805.2_6925_1_53	-	R34-3034
Helicobacter pylori SA252C	1345532	PRJEB4126	216076	Proteobacteria	delta/epsilon subdivisions	1.65283	39	-	CBOV01	54	-	-	9/21/13	1/30/15	Contig	MHH	SAMEA2272620	GCA_000476495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/495/GCA_000476495.1_SA252C	23898187	SA252C
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12859	51.8	-	FFEC01	80	2474	2132	2/9/16	3/21/17	Scaffold	SC	SAMEA2674307	GCA_900033365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/365/GCA_900033365.1_14555_6_77	-	2842STDY5881514
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.13683	65.8	-	CVWO01	648	7124	6521	6/24/15	3/18/17	Contig	PHE	SAMEA3374634	GCA_001181305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/305/GCA_001181305.1_P45_London_17_VIM_2_12_12	-	P45_London_17_VIM_2_12_12
Acinetobacter baumannii 44437_7	1311031	PRJNA195109	195109	Proteobacteria	Gammaproteobacteria	4.08463	39.1	-	JHCE01	96	4031	3774	3/26/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644728	GCA_000600675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/675/GCA_000600675.1_ASM60067v1	-	44437_7
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.12275	35.4	-	FJRH01	156	2179	2065	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888254	GCA_900073845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/845/GCA_900073845.1_VSA102	-	-
Streptococcus suis EA1832.92	1321372	PRJNA196953	196953	Terrabacteria group	Firmicutes	1.98633	40	-	AQQB01	89	1909	1795	10/22/13	3/15/17	Scaffold	"National Institute for Communicable Disease Control and Prevention,State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469500	GCA_000478745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/745/GCA_000478745.1_ASM47874v1	23951285	EA1832.92
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	4.64098	50.7	-	CXLL01	379	5218	4446	7/16/15	2/24/17	Scaffold	SC	SAMEA2164644	GCA_001262135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/135/GCA_001262135.1_8290_5_1	-	124511
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.06337	47	-	CWPA01	128	4507	4472	7/16/15	7/16/15	Scaffold	SC	SAMEA889380	GCA_001250255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/250/255/GCA_001250255.1_4056_5_6	-	A57
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.18693	28.5	-	CZXU01	295	3879	3754	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664031	GCA_900015095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/095/GCA_900015095.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae UHKPC61	1284800	PRJNA187292	187292	Proteobacteria	Gammaproteobacteria	5.3978	57.3	-	ARSC01	138	5443	5283	7/1/13	2/21/17	Contig	JCVI	SAMN02142022	GCA_000417065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/065/GCA_000417065.1_gkp14v01	24913165	UHKPC61
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.18682	45.2	-	NJAN01	76	5048	4819	7/18/17	8/21/17	Contig	University of New Hampshire	SAMN06917281	GCA_002238235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/235/GCA_002238235.1_ASM223823v1	28687650	MAVP-25
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.20139	37.4	-	FXIJ01	205	3341	3095	4/26/17	5/6/17	Scaffold	SC	SAMEA3893581	GCA_900179655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/655/GCA_900179655.1_19789_6_70	-	VREN1799
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.74054	31.4	-	MJZK01	35	1812	1712	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532425	GCA_001763785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/785/GCA_001763785.1_ASM176378v1	-	BCW_6948
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.86886	64.1	-	FVDJ01	11	4832	4670	3/10/17	3/18/17	Scaffold	SC	SAMEA2259567	GCA_900131805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/805/GCA_900131805.1_11861_7_30	-	762
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.85754	64.2	-	FVDN01	7	4903	4768	3/10/17	6/9/17	Scaffold	SC	SAMEA2259600	GCA_900131815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/815/GCA_900131815.1_11861_7_60	-	795
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.74048	31.4	-	MJZL01	34	1809	1711	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532427	GCA_001763805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/805/GCA_001763805.1_ASM176380v1	-	BCW_6950
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.19986	37.4	-	FXIP01	209	3347	3095	4/26/17	5/6/17	Scaffold	SC	SAMEA3893579	GCA_900179665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/665/GCA_900179665.1_19789_6_69	-	VREN1798
Vibrio parahaemolyticus TUMSAT_DE1_S1	1441607	PRJDB1576	241081	Proteobacteria	Gammaproteobacteria	5.28036	45.3	-	BAVF01	127	5148	4922	3/12/14	3/24/17	Scaffold	Tokyo University of Marine Science and Technology	SAMD00009559	GCA_000591455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/455/GCA_000591455.1_ASM59145v1	24723705	TUMSAT_DE1_S1
Klebsiella pneumoniae UHKPC28	1284789	PRJNA187281	187281	Proteobacteria	Gammaproteobacteria	5.39896	57.3	-	ARRU01	137	5454	5292	7/1/13	2/21/17	Contig	JCVI	SAMN02141969	GCA_000417105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/105/GCA_000417105.1_gkp3v01	24913165	UHKPC28
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.11957	28.6	-	FAFV01	418	3763	3647	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664239	GCA_900015115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/115/GCA_900015115.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.05191	47.2	-	CWNY01	69	3507	3451	7/16/15	7/16/15	Scaffold	SC	SAMEA889345	GCA_001251155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/155/GCA_001251155.1_4056_6_7	-	A130
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.75616	50.7	-	LYEQ01	471	5353	4496	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440957	GCA_001687685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/685/GCA_001687685.1_ASM168768v1	28028547	CDPH_C33
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.06097	41.1	-	CDSV01	62	2055	1944	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233770	GCA_000876695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/695/GCA_000876695.1_Velvet_assembly	-	B24W
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.12327	35.4	-	FJRD01	142	2175	2060	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888256	GCA_900073855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/855/GCA_900073855.1_VSA104	-	-
Acinetobacter baumannii 44437_8	1311032	PRJNA195110	195110	Proteobacteria	Gammaproteobacteria	4.09983	39.1	-	JHCD01	122	4082	3838	3/26/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644729	GCA_000600695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/695/GCA_000600695.1_ASM60069v1	-	44437_8
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.12781	65.8	-	CVWE01	873	7192	6445	6/24/15	3/18/17	Contig	PHE	SAMEA3374635	GCA_001181325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/325/GCA_001181325.1_E5_London_17_VIM_2_12_12	-	E5_London_17_VIM_2_12_12
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12728	51.7	-	FESG01	72	2478	2160	2/9/16	3/19/17	Scaffold	SC	SAMEA2673779	GCA_900033615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/615/GCA_900033615.1_14355_5_4	-	2842STDY5881057
Helicobacter pylori SA29A	1345504	PRJEB4021	216030	Proteobacteria	delta/epsilon subdivisions	1.62079	38.6	-	CBMV01	42	-	-	9/21/13	1/30/15	Contig	MHH	SAMEA2272706	GCA_000476535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/535/GCA_000476535.1_SA29A	23898187	SA29A
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.10046	39.7	-	CNUW02	187	2307	2078	3/22/15	3/11/17	Contig	SC	SAMEA1032551	GCA_001111945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/945/GCA_001111945.2_6999_6_16	-	302649
Escherichia coli KTE48	1182655	PRJNA164853	164853	Proteobacteria	Gammaproteobacteria	5.01836	50.7	-	ANVT01	6	5159	4838	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854607	GCA_000352305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/305/GCA_000352305.1_Esch_coli_KTE48_V1	-	KTE48
Mycobacterium tuberculosis TKK-01-0028	1324239	PRJNA198124	198124	Terrabacteria group	Actinobacteria	4.41061	65.6	-	JLYT01	7	4293	4129	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053762	GCA_000660665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/665/GCA_000660665.1_Myco_tube_TKK-01-0028_V1	-	TKK-01-0028
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.01538	37.8	-	MDFA01	23	3097	2999	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410633	GCA_001708765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/765/GCA_001708765.1_ASM170876v1	-	Lm79
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.65907	30.4	-	MOTV01	16	1757	1658	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04442373	GCA_001877655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/655/GCA_001877655.1_ASM187765v1	-	CDPHFDLB-F15M01918
Salmonella enterica subsp. enterica serovar Enteritidis str. 638970-15	938147	PRJNA61365	61365	Proteobacteria	Gammaproteobacteria	4.72656	52	-	ALHA01	82	4873	4581	12/31/12	5/19/17	Contig	FDA	SAMN01041119	GCA_000329965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/965/GCA_000329965.1_ASM32996v1	23383127	638970-15
Staphylococcus aureus SJOS6016	1409466	PRJNA223786	223786	Terrabacteria group	Firmicutes	2.86873	32.8	-	JBRV01	35	3005	2836	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381527	GCA_000539495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/495/GCA_000539495.1_Stap_aure_SJOS6016_V1	-	SJOS6016
Staphylococcus aureus LAMC0001	1409467	PRJNA223787	223787	Terrabacteria group	Firmicutes	2.89219	32.7	-	JBRU01	9	3047	2888	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381528	GCA_000539515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/515/GCA_000539515.1_Stap_aure_LAMC0001_V1	-	LAMC0001
Salmonella enterica subsp. enterica serovar Enteritidis str. 17927	984212	PRJNA62793	62793	Proteobacteria	Gammaproteobacteria	4.68788	52.1	-	ALHB01	91	4832	4538	12/31/12	5/19/17	Contig	FDA	SAMN01041084	GCA_000329985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/985/GCA_000329985.1_ASM32998v1	23383127	17927
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.68328	30.3	-	MOTU01	69	1797	1674	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04442374	GCA_001877675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/675/GCA_001877675.1_ASM187767v1	-	CDPHFDLB-F15M03172-A1
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.95445	37.8	-	MDFE01	16	2988	2899	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410648	GCA_001708775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/775/GCA_001708775.1_ASM170877v1	-	Lm99
Mycobacterium tuberculosis TKK-01-0029	1324240	PRJNA198125	198125	Terrabacteria group	Actinobacteria	4.40529	65.6	-	JLYS01	15	4278	4102	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053763	GCA_000660685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/685/GCA_000660685.1_Myco_tube_TKK-01-0029_V1	-	TKK-01-0029
Escherichia coli KTE50	1182657	PRJNA164857	164857	Proteobacteria	Gammaproteobacteria	5.11107	50.6	-	ANVU01	4	5144	4840	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00854609	GCA_000352325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/325/GCA_000352325.1_Esch_coli_KTE50_V1	-	KTE50
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10436	39.6	-	CKKK01	59	2323	2089	3/21/15	3/11/17	Contig	SC	SAMEA1023998	GCA_001111985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/985/GCA_001111985.1_6631_6_3	-	9V
Helicobacter pylori SA157C	1345557	PRJEB4068	216026	Proteobacteria	delta/epsilon subdivisions	1.67541	38.9	-	CBPJ01	78	-	-	9/21/13	1/30/15	Contig	MHH	SAMEA2272585	GCA_000476775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/775/GCA_000476775.1_SA157C	23898187	SA157C
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.1619	51.6	-	FESR01	77	2508	2174	2/9/16	3/19/17	Scaffold	SC	SAMEA2673866	GCA_900033625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/625/GCA_900033625.1_14355_5_31	-	2842STDY5881084
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.26249	65.5	-	CVWD01	636	7019	6589	6/24/15	3/18/17	Contig	PHE	SAMEA3374636	GCA_001181345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/345/GCA_001181345.1_E6_London_17_VIM_2_12_12	-	E6_London_17_VIM_2_12_12
Acinetobacter baumannii 44437_9	1311033	PRJNA195111	195111	Proteobacteria	Gammaproteobacteria	4.03366	39	-	JHCC01	156	4022	3720	3/26/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644730	GCA_000600715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/715/GCA_000600715.1_ASM60071v1	-	44437_9
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.08243	35.5	-	FJRF01	153	2120	2010	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888255	GCA_900073865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/865/GCA_900073865.1_VSA103	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04722	41.2	-	CDTG01	54	2035	1944	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233782	GCA_000876715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/715/GCA_000876715.1_Velvet_assembly	-	B35B
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.61209	50.9	-	LYEI01	484	5279	4276	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440965	GCA_001687705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/705/GCA_001687705.1_ASM168770v1	28028547	CDPH_C41
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.04167	46.9	-	CWQX01	231	3704	3675	7/16/15	7/16/15	Scaffold	SC	SAMEA889266	GCA_001251415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/415/GCA_001251415.1_4056_8_9	-	A487(2)
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.13162	28.6	-	FAHF01	414	3837	3708	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664273	GCA_900015125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/125/GCA_900015125.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae UHKPC47	1284791	PRJNA187283	187283	Proteobacteria	Gammaproteobacteria	5.49829	57.2	-	ARRV01	195	5572	5395	7/1/13	2/21/17	Contig	JCVI	SAMN02142017	GCA_000417125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/125/GCA_000417125.1_gkp5v01	24913165	UHKPC47
Vibrio parahaemolyticus TUMSAT_D06_S3	1441609	PRJDB1578	241083	Proteobacteria	Gammaproteobacteria	5.23367	45.3	-	BAVH01	69	5082	4865	3/12/14	3/24/17	Scaffold	Tokyo University of Marine Science and Technology	SAMD00009560	GCA_000591495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/495/GCA_000591495.1_ASM59149v1	24723705	TUMSAT_D06_S3
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.15834	37.5	-	FXIN01	236	3287	3047	4/26/17	5/6/17	Scaffold	SC	SAMEA3893578	GCA_900179675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/675/GCA_900179675.1_19789_6_68	-	VREN1782
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.96645	31.1	-	MJZM01	57	2105	1975	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532428	GCA_001763835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/835/GCA_001763835.1_ASM176383v1	-	BCW_6951
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.86876	64.1	-	FVCZ01	14	4821	4692	3/10/17	3/18/17	Scaffold	SC	SAMEA2259568	GCA_900131825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/825/GCA_900131825.1_11861_7_32	-	763
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.80607	64.2	-	FSBA01	15	4745	4626	12/14/16	3/21/17	Scaffold	SC	SAMEA2259696	GCA_900131845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/845/GCA_900131845.1_11861_8_25	-	891
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.81834	31.2	-	MJZP01	41	1920	1799	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532432	GCA_001763885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/885/GCA_001763885.1_ASM176388v1	-	BCW_6955
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.20165	37.4	-	FXIU01	206	3343	3094	4/26/17	5/6/17	Scaffold	SC	SAMEA3893591	GCA_900179685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/685/GCA_900179685.1_19789_6_75	-	VREN1805
Vibrio parahaemolyticus TUMSAT_H01_S4	1441610	PRJDB1579	241084	Proteobacteria	Gammaproteobacteria	5.21375	45.2	-	BAVI01	70	5040	4811	3/12/14	3/24/17	Scaffold	Tokyo University of Marine Science and Technology	SAMD00009556	GCA_000591515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/515/GCA_000591515.1_ASM59151v1	24723705	TUMSAT_H01_S4
Klebsiella pneumoniae UHKPC02	1284809	PRJNA187301	187301	Proteobacteria	Gammaproteobacteria	5.68124	57	-	ARSK01	233	5777	5578	7/1/13	2/21/17	Contig	JCVI	SAMN02141985	GCA_000417145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/145/GCA_000417145.1_gkp23v01	24913165	UHKPC02
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.23851	28.9	-	FAIO01	1416	3844	3638	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664307	GCA_900015135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/135/GCA_900015135.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.04746	46.9	-	CWQA01	112	3754	3724	7/16/15	7/16/15	Scaffold	SC	SAMEA889267	GCA_001251595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/595/GCA_001251595.1_4056_8_10	-	A483
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.74207	50.7	-	LYEL01	571	5423	4366	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440962	GCA_001687755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/755/GCA_001687755.1_ASM168775v1	28028547	CDPH_C38
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.08566	41.2	-	CDXD01	54	2087	1979	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234032	GCA_000876735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/735/GCA_000876735.1_Velvet_assembly	-	S1J
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.08545	35.4	-	FJRL01	151	2122	2011	9/30/16	3/21/17	Contig	INSTITUT PASTEUR	SAMEA3888257	GCA_900073875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/875/GCA_900073875.1_VSA105	-	-
Acinetobacter baumannii 25493_2	1311016	PRJNA195094	195094	Proteobacteria	Gammaproteobacteria	4.01037	39	-	JHDC01	68	3874	3643	3/26/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644698	GCA_000600735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/735/GCA_000600735.1_ASM60073v1	-	25493_2
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	6.95627	65.7	-	CVWM01	233	6725	6430	6/23/15	3/18/17	Contig	PHE	SAMEA3374637	GCA_001181365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/365/GCA_001181365.1_P46_South_East_6_12_12	-	P46_South_East_6_12_12
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15701	51.6	-	FEVI01	62	2506	2168	2/9/16	3/19/17	Scaffold	SC	SAMEA2674060	GCA_900033635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/635/GCA_900033635.1_14324_4_8	-	2842STDY5881253
Helicobacter pylori SA224C	1345518	PRJEB4117	215915	Proteobacteria	delta/epsilon subdivisions	1.64835	39	-	CBPP01	62	-	-	9/21/13	1/30/15	Contig	MHH	SAMEA2272607	GCA_000476795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/476/795/GCA_000476795.1_SA224C	23898187	SA224C
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09876	39.6	-	CMIG01	54	2323	2061	3/23/15	3/11/17	Contig	SC	SAMEA1029396	GCA_001112005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/005/GCA_001112005.1_7038_6_8	-	SMRU2984
Escherichia coli KTE54	1182661	PRJNA164865	164865	Proteobacteria	Gammaproteobacteria	4.80564	50.5	-	ANVV01	2	4801	4573	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00854613	GCA_000352345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/345/GCA_000352345.1_Esch_coli_KTE54_V1	-	KTE54
Mycobacterium tuberculosis TKK-01-0030	1324241	PRJNA198126	198126	Terrabacteria group	Actinobacteria	4.40939	65.5	-	JLYR01	9	4304	4138	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053764	GCA_000660705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/705/GCA_000660705.1_Myco_tube_TKK-01-0030_V1	-	TKK-01-0030
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.0148	37.8	-	MDFC01	22	3096	2998	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410640	GCA_001708795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/795/GCA_001708795.1_ASM170879v1	-	Lm90
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.6803	30.4	-	MOTR01	105	1818	1665	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN05163891	GCA_001877695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/695/GCA_001877695.1_ASM187769v1	-	CDPHFDLB-F15M03173-B2
Salmonella enterica subsp. enterica serovar Enteritidis str. CHS4	984213	PRJNA62795	62795	Proteobacteria	Gammaproteobacteria	4.6858	52	-	ALHC01	65	4816	4537	12/31/12	5/19/17	Contig	FDA	SAMN01041153	GCA_000330005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/005/GCA_000330005.1_ASM33000v1	23383127	CHS4
Staphylococcus aureus SMMC6034	1409468	PRJNA223788	223788	Terrabacteria group	Firmicutes	2.86411	32.8	-	JBRT01	32	2999	2830	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381529	GCA_000539535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/535/GCA_000539535.1_Stap_aure_SMMC6034_V1	-	SMMC6034
Staphylococcus aureus SMMC6037	1409469	PRJNA223789	223789	Terrabacteria group	Firmicutes	2.85928	32.8	-	JBRS01	29	2973	2830	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381530	GCA_000539555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/555/GCA_000539555.1_Stap_aure_SMMC6037_V1	-	SMMC6037
Salmonella enterica subsp. enterica serovar Enteritidis str. 543463 22-17	984215	PRJNA62799	62799	Proteobacteria	Gammaproteobacteria	4.70838	52	-	ALHE01	116	4849	4506	12/31/12	5/19/17	Contig	FDA	SAMN01041097	GCA_000330045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/045/GCA_000330045.1_ASM33004v1	23383127	543463 22-17
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.68004	30.4	-	MOTT01	128	1825	1644	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN05163889	GCA_001877705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/705/GCA_001877705.1_ASM187770v1	-	CDPHFDLB-F15M03172-A2
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.04819	37.8	-	MDFD01	23	3131	3044	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410646	GCA_001708835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/835/GCA_001708835.1_ASM170883v1	-	Lm93
Mycobacterium tuberculosis TKK-01-0031	1324242	PRJNA198127	198127	Terrabacteria group	Actinobacteria	4.41621	65.5	-	JLYQ01	2	4267	4113	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053765	GCA_000660725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/725/GCA_000660725.1_Myco_tube_TKK-01-0031_V1	-	TKK-01-0031
Escherichia coli KTE59	1182666	PRJNA164875	164875	Proteobacteria	Gammaproteobacteria	5.14593	50.5	-	ANVW01	7	5310	5012	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854618	GCA_000352365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/365/GCA_000352365.1_Esch_coli_KTE59_V1	-	KTE59
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.05409	39.6	-	CLHH01	52	2211	1991	3/21/15	3/11/17	Contig	SC	SAMEA1025948	GCA_001112025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/025/GCA_001112025.1_6925_5_15	-	29
Helicobacter pylori SA300A	1345540	PRJEB4129	216006	Proteobacteria	delta/epsilon subdivisions	1.61519	39.1	-	CBQG01	40	-	-	9/21/13	1/30/15	Contig	MHH	SAMEA2272580	GCA_000477255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/255/GCA_000477255.1_SA300A	23898187	SA300A
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16901	51.5	-	FEZY01	84	2516	2162	2/9/16	3/21/17	Scaffold	SC	SAMEA2674224	GCA_900033645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/645/GCA_900033645.1_14555_5_42	-	2842STDY5881383
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.11209	65.9	-	CVWN01	409	6963	6532	6/24/15	3/18/17	Contig	PHE	SAMEA3374638	GCA_001181385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/385/GCA_001181385.1_P47_London_12_VIM_2_12_12	-	P47_London_12_VIM_2_12_12
Acinetobacter baumannii 25493_10	1311024	PRJNA195102	195102	Proteobacteria	Gammaproteobacteria	3.92681	39	-	JHDE01	120	3802	3548	3/26/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644696	GCA_000600755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/755/GCA_000600755.1_ASM60075v1	-	25493_10
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.08638	35.4	-	FJRE01	143	2123	2008	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888258	GCA_900073885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/885/GCA_900073885.1_VSA106	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	1.99071	41.2	-	CDTH01	65	1996	1877	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233776	GCA_000876775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/775/GCA_000876775.1_Velvet_assembly	-	B29K
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.67564	50.6	-	LYEG01	562	5216	4309	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440967	GCA_001687785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/785/GCA_001687785.1_ASM168778v1	28028547	CDPH_C43
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.13543	47.6	-	CWSR01	2484	5879	5874	7/16/15	7/16/15	Scaffold	SC	SAMEA889240	GCA_001252195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/195/GCA_001252195.1_4370_2_5	-	6196
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.19111	28.8	-	FAIT01	1156	3793	3630	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664313	GCA_900015145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/145/GCA_900015145.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae UHKPC31	1284807	PRJNA187299	187299	Proteobacteria	Gammaproteobacteria	5.39075	57.3	-	ARSI01	136	5444	5282	7/1/13	2/21/17	Contig	JCVI	SAMN02142000	GCA_000417165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/165/GCA_000417165.1_gkp21v01	24913165	UHKPC31
Vibrio parahaemolyticus TUMSAT_H03_S5	1441611	PRJDB1580	241085	Proteobacteria	Gammaproteobacteria	5.5486	44.2	-	BAVJ01	59	5183	4997	3/12/14	3/24/17	Scaffold	Tokyo University of Marine Science and Technology	SAMD00009561	GCA_000591535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/535/GCA_000591535.1_ASM59153v1	24723705	TUMSAT_H03_S5
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.14074	37.5	-	FXIK01	209	3272	3034	4/26/17	5/6/17	Scaffold	SC	SAMEA3893587	GCA_900179695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/695/GCA_900179695.1_19789_6_73	-	VREN1803
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.86861	31.2	-	MJZR01	47	1968	1847	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532434	GCA_001763935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/935/GCA_001763935.1_ASM176393v1	-	BCW_6957
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.92235	64.1	-	FVDT01	18	4895	4736	3/10/17	3/18/17	Scaffold	SC	SAMEA2259666	GCA_900131855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/855/GCA_900131855.1_11893_6_25	-	861
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.72749	64.3	-	FVDW01	13	4717	4583	3/10/17	6/9/17	Scaffold	SC	SAMEA2259644	GCA_900131865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/865/GCA_900131865.1_11893_6_6	-	839
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.73804	31.4	-	MJZS01	40	1801	1685	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532435	GCA_001763955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/955/GCA_001763955.1_ASM176395v1	-	BCW_6958
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.19734	37.4	-	FXIS01	209	3347	3090	4/26/17	5/6/17	Scaffold	SC	SAMEA3893589	GCA_900179705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/705/GCA_900179705.1_19789_6_74	-	VREN1804
Vibrio parahaemolyticus TUMSAT_H10_S6	1441612	PRJDB1581	241086	Proteobacteria	Gammaproteobacteria	5.21384	45.2	-	BAVK01	64	4973	4758	3/12/14	3/24/17	Scaffold	Tokyo University of Marine Science and Technology	SAMD00009557	GCA_000591555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/555/GCA_000591555.1_ASM59155v1	24723705	TUMSAT_H10_S6
Klebsiella pneumoniae UHKPC06	1284808	PRJNA187300	187300	Proteobacteria	Gammaproteobacteria	5.40797	57.3	-	ARSJ01	141	5465	5298	7/1/13	2/21/17	Contig	JCVI	SAMN02141971	GCA_000417185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/185/GCA_000417185.1_gkp22v01	24913165	UHKPC06
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.24524	29	-	FAKV01	1431	3826	3633	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664364	GCA_900015155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/155/GCA_900015155.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.01157	47.2	-	CWOO01	89	3517	3474	7/16/15	7/16/15	Scaffold	SC	SAMEA889344	GCA_001253175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/175/GCA_001253175.1_4056_6_10	-	A184
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.70442	50.5	-	LYEF01	553	5307	4344	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440968	GCA_001687795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/795/GCA_001687795.1_ASM168779v1	28028547	CDPH_C44
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.08241	41.2	-	CECD01	59	2089	1995	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234121	GCA_000876815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/815/GCA_000876815.1_Velvet_assembly	-	V38O
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.08603	35.4	-	FJRJ01	155	2123	2007	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888260	GCA_900073895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/895/GCA_900073895.1_VSA108	-	-
Acinetobacter baumannii 25493_1	1311015	PRJNA195093	195093	Proteobacteria	Gammaproteobacteria	4.0315	39	-	JHDD01	76	3911	3663	3/26/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644697	GCA_000600775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/775/GCA_000600775.1_ASM60077v1	-	25493_1
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.11678	65.8	-	CVWT01	967	7176	6384	6/23/15	3/18/17	Contig	PHE	SAMEA3374639	GCA_001181405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/405/GCA_001181405.1_P48_London_17_VIM_2_01_13	-	P48_London_17_VIM_2_01_13
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12301	51.8	-	FFBW01	84	2494	2177	2/9/16	3/19/17	Scaffold	SC	SAMEA2674325	GCA_900033655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/655/GCA_900033655.1_14555_5_92	-	2842STDY5881433
Helicobacter pylori H13-1	1400821	PRJNA219053	219053	Proteobacteria	delta/epsilon subdivisions	1.63147	38.7	-	AYUH01	96	-	-	11/25/13	11/25/13	Contig	Scientific Research Institute of Physical-Chemical Medicine	SAMN02355411	GCA_000499325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/325/GCA_000499325.1_H13-1	-	H13-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.13895	39.6	-	CNWS02	207	2317	2120	3/23/15	3/11/17	Contig	SC	SAMEA1032461	GCA_001112145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/145/GCA_001112145.2_7001_2_3	-	R34-3103
Escherichia coli KTE63	1182670	PRJNA164883	164883	Proteobacteria	Gammaproteobacteria	5.06055	50.5	-	ANVX01	8	5175	4850	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854622	GCA_000352385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/385/GCA_000352385.1_Esch_coli_KTE63_V1	-	KTE63
Mycobacterium tuberculosis TKK-01-0033	1324243	PRJNA198128	198128	Terrabacteria group	Actinobacteria	4.4072	65.6	-	JLYO01	2	4279	4112	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053766	GCA_000660745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/745/GCA_000660745.1_Myco_tube_TKK-01-0033_V1	-	TKK-01-0033
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.99546	37.8	-	MDFF01	19	3048	2974	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410692	GCA_001708845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/845/GCA_001708845.1_ASM170884v1	-	OCF14
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.69223	30.3	-	MOTS01	47	1806	1676	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04442378	GCA_001877715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/715/GCA_001877715.1_ASM187771v1	-	CDPHFDLB-F15M03173-B1
Salmonella enterica subsp. enterica serovar Enteritidis str. 543463 40-18	984216	PRJNA62801	62801	Proteobacteria	Gammaproteobacteria	4.70133	52	-	ALHF01	122	4862	4477	12/31/12	5/19/17	Contig	FDA	SAMN01041098	GCA_000330065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/065/GCA_000330065.1_ASM33006v1	23383127	543463 40-18
Staphylococcus aureus SMMC6038	1409470	PRJNA223790	223790	Terrabacteria group	Firmicutes	2.85998	32.8	-	JBRR01	25	2991	2820	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381531	GCA_000539575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/575/GCA_000539575.1_Stap_aure_SMMC6038_V1	-	SMMC6038
Staphylococcus aureus SCLE6003	1409471	PRJNA223791	223791	Terrabacteria group	Firmicutes	2.85013	32.9	-	JBRQ01	17	2975	2809	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381532	GCA_000539595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/595/GCA_000539595.1_Stap_aure_SCLE6003_V1	-	SCLE6003
Salmonella enterica subsp. enterica serovar Enteritidis str. 561362 1-1	984217	PRJNA62803	62803	Proteobacteria	Gammaproteobacteria	4.71767	52	-	ALHG01	79	4861	4577	12/31/12	5/19/17	Contig	FDA	SAMN01041101	GCA_000330085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/085/GCA_000330085.1_ASM33008v1	23383127	561362 1-1
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.68826	30.3	-	MOTQ01	22	1800	1678	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04442379	GCA_001877725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/725/GCA_001877725.1_ASM187772v1	-	CDPHFDLB-F15M03174-C2
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.01589	37.8	-	MDEY01	25	3085	2998	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410588	GCA_001708865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/865/GCA_001708865.1_ASM170886v1	-	Lm70
Mycobacterium tuberculosis TKK-01-0034	1324244	PRJNA198129	198129	Terrabacteria group	Actinobacteria	4.40393	65.6	-	JLYN01	2	4263	4117	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053767	GCA_000660765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/765/GCA_000660765.1_Myco_tube_TKK-01-0034_V1	-	TKK-01-0034
Escherichia coli KTE65	1182672	PRJNA164887	164887	Proteobacteria	Gammaproteobacteria	5.18222	50.5	-	ANVY01	4	5363	5054	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854624	GCA_000352405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/405/GCA_000352405.1_Esch_coli_KTE65_V1	-	KTE65
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.1159	39.5	-	CMSD01	47	2348	2109	3/23/15	3/11/17	Contig	SC	SAMEA2061957	GCA_001112265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/265/GCA_001112265.1_9803_8_61	-	23F
Helicobacter pylori E48	1400820	PRJNA219052	219052	Proteobacteria	delta/epsilon subdivisions	1.66192	38.7	-	AYHQ01	61	-	-	11/25/13	11/25/13	Contig	Scientific Research Institute of Physical-Chemical Medicine	SAMN02356207	GCA_000499345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/345/GCA_000499345.1_E48	-	E48
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15827	51.6	-	FFDF01	77	2496	2159	2/9/16	3/19/17	Scaffold	SC	SAMEA2674219	GCA_900033665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/665/GCA_900033665.1_14555_6_33	-	2842STDY5881470
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.05257	65.8	-	CVWQ01	300	6880	6533	6/24/15	3/18/17	Contig	PHE	SAMEA3374640	GCA_001181425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/425/GCA_001181425.1_P49_London_7_VIM_2_01_13	-	P49_London_7_VIM_2_01_13
Acinetobacter baumannii 25493_3	1311017	PRJNA195095	195095	Proteobacteria	Gammaproteobacteria	4.0734	39.5	-	JHDB01	75	3984	3723	3/26/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644699	GCA_000600795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/795/GCA_000600795.1_ASM60079v1	-	25493_3
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.08661	35.4	-	FJRG01	145	2125	2015	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888259	GCA_900073905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/905/GCA_900073905.1_VSA107	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04244	41.2	-	CDUP01	54	2022	1920	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233834	GCA_000876835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/835/GCA_000876835.1_Velvet_assembly	-	E58D
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.45761	50.8	-	LYEB01	438	4843	4214	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440973	GCA_001687825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/825/GCA_001687825.1_ASM168782v1	28028547	CDPH_C84
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.03765	47.1	-	CWOW01	123	3959	3931	7/16/15	7/16/15	Scaffold	SC	SAMEA889383	GCA_001253435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/435/GCA_001253435.1_4056_5_7	-	A51
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.14453	28.5	-	FAKT01	366	3873	3737	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664365	GCA_900015165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/165/GCA_900015165.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae DMC1316	1284799	PRJNA187291	187291	Proteobacteria	Gammaproteobacteria	5.45097	57.2	-	ARSB01	168	5511	5336	7/1/13	2/20/17	Contig	JCVI	SAMN02141982	GCA_000417205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/205/GCA_000417205.1_gkp13v01	24913165	DMC1316
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.12632	45.2	-	JNUG02	35	4916	4735	6/13/14	3/20/17	Scaffold	FDA/CFSAN	SAMN02741399	GCA_000707645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/645/GCA_000707645.2_ASM70764v2	26994080	CFSAN012491
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.18786	37.4	-	FXIT01	205	3303	3084	4/26/17	5/6/17	Scaffold	SC	SAMEA3893583	GCA_900179715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/715/GCA_900179715.1_19789_6_71	-	VREN1801
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.8743	31.1	-	MJZU01	35	1970	1824	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532437	GCA_001763995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/995/GCA_001763995.1_ASM176399v1	-	BCW_7432
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.92062	64.1	-	FVDV01	14	4900	4740	3/10/17	3/18/17	Scaffold	SC	SAMEA2259667	GCA_900131875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/875/GCA_900131875.1_11893_6_26	-	862
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21128	64.1	-	FWCT01	11	5331	5154	3/16/17	3/24/17	Scaffold	SC	SAMEA2071366	GCA_900131895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/131/895/GCA_900131895.1_10665_4_34	-	289
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.84885	31.2	-	MJZW01	48	1959	1840	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532439	GCA_001764035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/035/GCA_001764035.1_ASM176403v1	-	BCW_7434
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.19242	37.4	-	FXJC01	154	3342	3094	4/26/17	5/6/17	Scaffold	SC	SAMEA3893483	GCA_900179725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/725/GCA_900179725.1_19789_6_93	-	VREN1844
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.12896	45.2	-	JNUH02	34	4912	4737	6/13/14	3/20/17	Scaffold	FDA/CFSAN	SAMN02741400	GCA_000707665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/707/665/GCA_000707665.2_ASM70766v2	26994080	CFSAN012492
Klebsiella pneumoniae UHKPC18	1284806	PRJNA187298	187298	Proteobacteria	Gammaproteobacteria	5.61746	57.1	-	ARSH01	194	5696	5514	7/1/13	2/21/17	Contig	JCVI	SAMN02141976	GCA_000417245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/245/GCA_000417245.1_gkp20v01	24913165	UHKPC18
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.22003	29.3	-	FAMP01	1232	3882	3673	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664412	GCA_900015175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/175/GCA_900015175.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.74737	48.1	-	CWPK01	766	3145	3125	7/17/15	7/17/15	Scaffold	SC	SAMEA889265	GCA_001253455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/455/GCA_001253455.1_3002_8_7	-	4122
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.5706	50.9	-	LYDY01	460	5023	4335	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440979	GCA_001687865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/865/GCA_001687865.1_ASM168786v1	28028547	CDPH_C98
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.10203	41.1	-	CDVR01	57	2108	2006	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233790	GCA_000876855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/855/GCA_000876855.1_Velvet_assembly	-	type strain: B40
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.084	35.4	-	FJRI01	149	2124	2013	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888261	GCA_900073915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/915/GCA_900073915.1_VSA109	-	-
Acinetobacter baumannii 25493_4	1311018	PRJNA195096	195096	Proteobacteria	Gammaproteobacteria	3.97742	39	-	JHDA01	61	3849	3467	3/26/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644700	GCA_000600815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/815/GCA_000600815.1_ASM60081v1	-	25493_4
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.11645	65.8	-	CVWP01	192	6896	6651	6/24/15	3/18/17	Contig	PHE	SAMEA3374641	GCA_001181445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/445/GCA_001181445.1_P50_London_9_VIM_2_01_13	-	P50_London_9_VIM_2_01_13
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16004	51.6	-	FEPG01	59	2516	2178	2/9/16	3/19/17	Scaffold	SC	SAMEA2673776	GCA_900034195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/195/GCA_900034195.1_14355_4_4	-	2842STDY5880961
Helicobacter pylori	210	PRJEB6882	265957	Proteobacteria	delta/epsilon subdivisions	1.64276	38.9	-	CCMT01	101	-	-	10/31/14	12/16/14	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA2674916	GCA_000824885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/885/GCA_000824885.1_H3016	25218701	-
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.15798	39.7	-	CMWF01	91	2305	2032	3/22/15	3/11/17	Contig	SC	SAMEA1022867	GCA_001112365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/365/GCA_001112365.1_5756_7_1	-	309
Escherichia coli KTE78	1182685	PRJNA164913	164913	Proteobacteria	Gammaproteobacteria	4.96101	50.6	-	ANVZ01	8	4889	4629	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00854637	GCA_000352425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/425/GCA_000352425.1_Esch_coli_KTE78_V1	-	KTE78
Mycobacterium tuberculosis TKK-01-0035	1324245	PRJNA198130	198130	Terrabacteria group	Actinobacteria	4.41615	65.6	-	JLYM01	1	4294	4123	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053768	GCA_000660785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/785/GCA_000660785.1_Myco_tube_TKK-01-0035_V1	-	TKK-01-0035
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.0048	37.8	-	MDEW01	35	3048	2958	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410582	GCA_001708875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/875/GCA_001708875.1_ASM170887v1	-	Lm44
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.63973	30.4	-	MOWK01	30	1710	1602	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04442354	GCA_001877775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/775/GCA_001877775.1_ASM187777v1	-	CDPHFDLB-F12M00436-A
Salmonella enterica subsp. enterica serovar Enteritidis str. 642044 4-1	984218	PRJNA62805	62805	Proteobacteria	Gammaproteobacteria	4.71704	52	-	ALHH01	86	4855	4548	12/31/12	5/19/17	Contig	FDA	SAMN01041124	GCA_000330105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/105/GCA_000330105.1_ASM33010v1	23383127	642044 4-1
Staphylococcus aureus SJUD6014	1409472	PRJNA223792	223792	Terrabacteria group	Firmicutes	3.00401	32.8	-	JBRP01	34	3173	2987	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381533	GCA_000539615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/615/GCA_000539615.1_Stap_aure_SJUD6014_V1	-	SJUD6014
Staphylococcus aureus SJUD6010	1409473	PRJNA223793	223793	Terrabacteria group	Firmicutes	2.85894	32.8	-	JBRO01	23	2991	2828	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381534	GCA_000539635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/635/GCA_000539635.1_Stap_aure_SJUD6010_V1	-	SJUD6010
Salmonella enterica subsp. enterica serovar Enteritidis str. 642046 4-7	984219	PRJNA62807	62807	Proteobacteria	Gammaproteobacteria	4.66895	52	-	ALHI01	100	4808	4467	12/31/12	5/19/17	Contig	FDA	SAMN01041126	GCA_000330125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/125/GCA_000330125.1_ASM33012v1	23383127	642046 4-7
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.63587	30.4	-	MOWJ01	23	1705	1596	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04442355	GCA_001877855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/855/GCA_001877855.1_ASM187785v1	-	CDPHFDLB-F12M00436-D
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.00622	37.8	-	MDEX01	33	3059	2958	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410585	GCA_001708915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/915/GCA_001708915.1_ASM170891v1	-	Lm53
Mycobacterium tuberculosis TKK-01-0037	1324247	PRJNA198132	198132	Terrabacteria group	Actinobacteria	4.41877	65.5	-	JLYK01	5	4271	4105	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053770	GCA_000660805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/805/GCA_000660805.1_Myco_tube_TKK-01-0037_V1	-	TKK-01-0037
Escherichia coli KTE79	1182686	PRJNA164915	164915	Proteobacteria	Gammaproteobacteria	4.91658	50.6	-	ANWA01	2	4864	4624	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00854638	GCA_000352445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/445/GCA_000352445.1_Esch_coli_KTE79_V1	-	KTE79
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.13159	39.7	-	CMNG01	46	2302	2047	3/23/15	3/11/17	Contig	SC	SAMEA1029439	GCA_001112385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/385/GCA_001112385.1_7092_6_16	-	SMRU3112
Helicobacter pylori	210	PRJEB6882	265957	Proteobacteria	delta/epsilon subdivisions	1.6502	38.8	-	CCMV01	48	-	-	10/30/14	12/16/14	Contig	Institute of Medical Microbiology and Hospital Epidemiology	SAMEA2674917	GCA_000824905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/905/GCA_000824905.1_H3017	25218701	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12197	51.7	-	FETP01	93	2483	2159	2/9/16	3/19/17	Scaffold	SC	SAMEA2674032	GCA_900034205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/205/GCA_900034205.1_14355_5_85	-	2842STDY5881138
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.11939	65.8	-	CVWK01	192	6908	6649	6/23/15	3/18/17	Contig	PHE	SAMEA3374642	GCA_001181465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/465/GCA_001181465.1_P43_2_London_9_VIM_2_11_12	-	P43_2_London_9_VIM_2_11_12
Acinetobacter baumannii 25493_5	1311019	PRJNA195097	195097	Proteobacteria	Gammaproteobacteria	3.92624	39	-	JHCZ01	90	3797	3523	3/26/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644701	GCA_000600835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/835/GCA_000600835.1_ASM60083v1	-	25493_5
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.08685	35.4	-	FJRK01	144	2126	2010	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888264	GCA_900073925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/925/GCA_900073925.1_VSA112	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05946	41.1	-	CDWG01	57	2049	1948	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234048	GCA_000876875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/875/GCA_000876875.1_Velvet_assembly	-	S3A
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.57029	50.9	-	LXUW01	420	5039	4303	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440987	GCA_001687875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/875/GCA_001687875.1_ASM168787v1	28028547	CDPH_C116
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.01597	47.3	-	CWOV01	106	3456	3413	7/16/15	7/16/15	Scaffold	SC	SAMEA889287	GCA_001253495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/495/GCA_001253495.1_4056_6_8	-	A111
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.16129	29.1	-	FANZ01	1211	3797	3612	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664448	GCA_900015185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/185/GCA_900015185.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae UHKPC69	1284793	PRJNA187285	187285	Proteobacteria	Gammaproteobacteria	5.60693	57.1	-	ARRW01	194	5691	5500	7/1/13	2/21/17	Contig	JCVI	SAMN02142026	GCA_000417305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/305/GCA_000417305.1_gkp7v01	24913165	UHKPC69
Vibrio parahaemolyticus	670	PRJNA255331	255331	Proteobacteria	Gammaproteobacteria	5.17492	45.3	-	JPLU01	14	4965	4755	7/24/14	4/10/17	Scaffold	INMEGEN-Mexico	SAMN02912085	GCA_000732995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/995/GCA_000732995.1_ASM73299v1	25125645	FIM-S1392-
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.19245	37.4	-	FXIV01	168	3334	3097	4/26/17	5/6/17	Scaffold	SC	SAMEA3893719	GCA_900179735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/735/GCA_900179735.1_19789_7_25	-	VREN1837
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.96789	31	-	MJZX01	62	2092	1934	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532440	GCA_001764045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/045/GCA_001764045.1_ASM176404v1	-	BCW_7435
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.13889	64.1	-	FVEJ01	10	5217	5047	3/10/17	3/18/17	Scaffold	SC	SAMEA2070662	GCA_900132085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/085/GCA_900132085.1_10665_4_53	-	308
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.06679	64.1	-	FSBL01	20	5086	4962	12/14/16	3/21/17	Scaffold	SC	SAMEA2259578	GCA_900132175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/175/GCA_900132175.1_11861_7_41	-	773
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.82968	31.2	-	MJZY01	41	1935	1823	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532441	GCA_001764075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/075/GCA_001764075.1_ASM176407v1	-	BCW_7437
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.14131	37.5	-	FXJG01	205	3274	3029	4/26/17	5/6/17	Scaffold	SC	SAMEA3893601	GCA_900179745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/745/GCA_900179745.1_19789_6_82	-	VREN1812
Vibrio parahaemolyticus	670	PRJNA255173	255173	Proteobacteria	Gammaproteobacteria	5.53404	45.2	-	JPKT01	82	5363	5096	7/29/14	3/24/17	Scaffold	National Cheng Kung University	SAMN02910584	GCA_000736315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/315/GCA_000736315.1_ASM73631v1	25189578	NCKU_TV_5HP
Klebsiella pneumoniae UHKPC77	1284794	PRJNA187286	187286	Proteobacteria	Gammaproteobacteria	5.6223	57.1	-	ARRX01	194	5710	5518	7/1/13	2/21/17	Contig	JCVI	SAMN02142027	GCA_000417325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/325/GCA_000417325.1_gkp8v01	24913165	UHKPC77
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.20971	28.6	-	FAAD01	355	3908	3777	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664088	GCA_900015225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/225/GCA_900015225.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.08936	46.3	-	CWQC01	141	6219	6190	7/16/15	7/16/15	Scaffold	SC	SAMEA889295	GCA_001253555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/555/GCA_001253555.1_4056_8_11	-	A279
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.62158	50.8	-	LXUP01	433	5010	4410	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440994	GCA_001687925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/925/GCA_001687925.1_ASM168792v1	28028547	CDPH_C125
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.10967	41.2	-	CEBE01	56	2120	2020	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234118	GCA_000876895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/895/GCA_000876895.1_Velvet_assembly	-	V36V
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.07923	35.4	-	FJRM01	145	2117	2004	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888263	GCA_900073935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/935/GCA_900073935.1_VSA111	-	-
Acinetobacter baumannii 25493_6	1311020	PRJNA195098	195098	Proteobacteria	Gammaproteobacteria	4.10746	39.1	-	JHCY01	169	4016	3709	3/26/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644702	GCA_000600855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/855/GCA_000600855.1_ASM60085v1	-	25493_6
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.11481	65.8	-	CVWR01	309	6961	6619	6/24/15	3/18/17	Contig	PHE	SAMEA3374643	GCA_001181485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/485/GCA_001181485.1_P51_1_London_9_VIM_2_02_13	-	P51_1_London_9_VIM_2_02_13
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.133	51.7	-	FETQ01	85	2549	2145	2/9/16	8/21/17	Scaffold	SC	SAMEA2674040	GCA_900034215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/215/GCA_900034215.1_14355_5_89	-	2842STDY5881142
Helicobacter pylori	210	PRJNA287060	287060	Proteobacteria	delta/epsilon subdivisions	1.34992	38.6	-	LFKD01	17	1310	1200	7/31/15	7/31/15	Contig	University of Malaya-University of Western Australia	SAMN03776039	GCA_001189605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/189/605/GCA_001189605.1_ASM118960v1	-	UM096
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.04774	39.8	-	CRQS01	52	2256	2042	3/23/15	3/10/17	Contig	SC	SAMEA1024941	GCA_001112565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/565/GCA_001112565.1_6791_6_17	-	SMRU641
Escherichia coli KTE84	1182690	PRJNA164923	164923	Proteobacteria	Gammaproteobacteria	4.6178	50.7	-	ANWB01	3	4723	4435	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00854642	GCA_000352465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/465/GCA_000352465.1_Esch_coli_KTE84_V1	-	KTE84
Mycobacterium tuberculosis TKK-01-0038	1324248	PRJNA198133	198133	Terrabacteria group	Actinobacteria	4.40232	65.6	-	JLYJ01	8	4294	4127	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053771	GCA_000660825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/825/GCA_000660825.1_Myco_tube_TKK-01-0038_V1	-	TKK-01-0038
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.99887	37.8	-	MDMC01	14	3087	2996	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410652	GCA_001709365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/365/GCA_001709365.1_ASM170936v1	-	Lm105
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.63247	30.4	-	MOWI01	32	1697	1595	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN05163878	GCA_001877865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/865/GCA_001877865.1_ASM187786v1	-	CDPHFDLB-F12M00436-H
Salmonella enterica subsp. enterica serovar Enteritidis str. 648898 4-5	984220	PRJNA62809	62809	Proteobacteria	Gammaproteobacteria	4.71056	52	-	ALHJ01	126	4851	4507	12/31/12	5/19/17	Contig	FDA	SAMN01041127	GCA_000330145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/145/GCA_000330145.1_ASM33014v1	23383127	648898 4-5
Staphylococcus aureus SJUD6015	1409474	PRJNA223794	223794	Terrabacteria group	Firmicutes	2.99628	32.7	-	JBRN01	25	3180	3012	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381535	GCA_000539655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/655/GCA_000539655.1_Stap_aure_SJUD6015_V1	-	SJUD6015
Staphylococcus aureus SJUD6018	1409475	PRJNA223795	223795	Terrabacteria group	Firmicutes	2.93371	32.9	-	JBRM01	23	3088	2915	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381536	GCA_000539675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/675/GCA_000539675.1_Stap_aure_SJUD6018_V1	-	SJUD6018
Salmonella enterica subsp. enterica serovar Enteritidis str. 648899 3-17	984221	PRJNA62811	62811	Proteobacteria	Gammaproteobacteria	4.68586	52.1	-	ALHK01	193	4846	4469	12/31/12	5/19/17	Contig	FDA	SAMN01041128	GCA_000330165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/165/GCA_000330165.1_ASM33016v1	23383127	648899 3-17
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.6374	30.4	-	MOWH01	22	1705	1595	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04442358	GCA_001877895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/895/GCA_001877895.1_ASM187789v1	-	CDPHFDLB-F12M00521-3g3a
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.99506	37.8	-	MDMD01	14	3047	2949	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410651	GCA_001709375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/375/GCA_001709375.1_ASM170937v1	-	Lm102
Mycobacterium tuberculosis TKK-01-0039	1324249	PRJNA198134	198134	Terrabacteria group	Actinobacteria	4.44124	65.4	-	JLYI01	11	4318	4109	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053772	GCA_000660845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/845/GCA_000660845.1_Myco_tube_TKK-01-0039_V1	-	TKK-01-0039
Escherichia coli KTE91	1182694	PRJNA164931	164931	Proteobacteria	Gammaproteobacteria	5.05826	50.5	-	ANWC01	5	5186	4864	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854646	GCA_000352485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/485/GCA_000352485.1_Esch_coli_KTE91_V1	-	KTE91
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.04602	39.6	-	CMEN01	65	2239	2039	3/21/15	3/11/17	Contig	SC	SAMEA1028707	GCA_001112625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/625/GCA_001112625.1_7011_5_13	-	SMRU2797
Helicobacter pylori JCM 12093	1300157	PRJDB893	243771	Proteobacteria	delta/epsilon subdivisions	1.6018	39	-	BBEM01	61	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016807	GCA_001312765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/765/GCA_001312765.1_ASM131276v1	-	JCM 12093
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.20869	51.6	-	FEVL01	83	2581	2232	2/9/16	3/19/17	Scaffold	SC	SAMEA2674064	GCA_900034225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/225/GCA_900034225.1_14324_4_12	-	2842STDY5881257
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.1074	65.8	-	CVWB01	372	6996	6601	6/23/15	3/18/17	Contig	PHE	SAMEA3374644	GCA_001181505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/505/GCA_001181505.1_E7_London_9_VIM_2_02_13	-	E7_London_9_VIM_2_02_13
Acinetobacter baumannii 25493_8	1311022	PRJNA195100	195100	Proteobacteria	Gammaproteobacteria	4.10651	39.4	-	JHCX01	93	4033	3775	3/26/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644703	GCA_000600875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/875/GCA_000600875.1_ASM60087v1	-	25493_8
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.08581	35.4	-	FJRP01	144	2126	2015	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888265	GCA_900073945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/945/GCA_900073945.1_VSA113	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04354	41.3	-	CEBT01	415	2050	1897	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234062	GCA_000876915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/915/GCA_000876915.1_Velvet_assembly	-	S6N
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.4756	50.9	-	LYEW01	464	4833	4254	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440939	GCA_001687935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/935/GCA_001687935.1_ASM168793v1	28028547	CDPH_C15
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.9754	47	-	CWPQ01	123	3732	3690	7/16/15	7/16/15	Scaffold	SC	SAMEA889279	GCA_001253615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/615/GCA_001253615.1_4056_7_2	-	A219
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.31338	29.6	-	FAEF01	1760	3889	3607	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664193	GCA_900015245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/245/GCA_900015245.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae UHKPC96	1284795	PRJNA187287	187287	Proteobacteria	Gammaproteobacteria	5.6103	57.1	-	ARRY01	188	5692	5513	7/1/13	2/21/17	Contig	JCVI	SAMN02142029	GCA_000417345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/345/GCA_000417345.1_gkp9v01	24913165	UHKPC96
Vibrio parahaemolyticus	670	PRJNA255173	255173	Proteobacteria	Gammaproteobacteria	5.31878	45.3	-	JPKU01	144	5187	4968	7/29/14	3/24/17	Scaffold	National Cheng Kung University	SAMN02910585	GCA_000736325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/325/GCA_000736325.1_ASM73632v1	25189578	NCKU_CV_CHN
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.19851	37.4	-	FXJA01	210	3338	3100	4/26/17	5/6/17	Scaffold	SC	SAMEA3893474	GCA_900179755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/755/GCA_900179755.1_19789_6_89	-	VREN1839
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.83704	31.2	-	MKAO01	48	1938	1830	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532340	GCA_001764395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/395/GCA_001764395.1_ASM176439v1	-	BCW_5818
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.80646	64.2	-	FVEO01	14	4786	4637	3/10/17	3/18/17	Scaffold	SC	SAMEA2259593	GCA_900132185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/185/GCA_900132185.1_11861_7_53	-	788
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.8547	64.2	-	FVEP01	17	4855	4701	3/10/17	3/18/17	Scaffold	SC	SAMEA2259594	GCA_900132195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/195/GCA_900132195.1_11861_7_54	-	789
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.71177	31.5	-	MKAY01	31	1760	1646	10/4/16	3/20/17	Contig	University of California at Davis	SAMN04532246	GCA_001764575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/575/GCA_001764575.1_ASM176457v1	-	BCW_4724
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.93999	37.9	-	FXJL01	160	3049	2843	4/26/17	5/6/17	Scaffold	SC	SAMEA3893759	GCA_900179765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/765/GCA_900179765.1_19789_7_107	-	VREN3646
Vibrio parahaemolyticus	670	PRJNA255173	255173	Proteobacteria	Gammaproteobacteria	5.54341	45.2	-	JPKS01	100	5379	5099	7/29/14	3/24/17	Scaffold	National Cheng Kung University	SAMN02910583	GCA_000736335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/335/GCA_000736335.1_ASM73633v1	25189578	NCKU_TV_3HP
Klebsiella pneumoniae 160_1080	1304917	PRJNA193161	193161	Proteobacteria	Gammaproteobacteria	5.39003	57.4	-	ARSN01	144	5442	5278	7/1/13	2/21/17	Contig	JCVI	SAMN02141989	GCA_000417365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/365/GCA_000417365.1_gkp50v01	24913165	160_1080
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.20423	28.9	-	FAEG01	829	3787	3645	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664197	GCA_900015255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/255/GCA_900015255.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.94965	47.2	-	CWOI01	80	3484	3433	7/17/15	7/17/15	Scaffold	SC	SAMEA889205	GCA_001253755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/755/GCA_001253755.1_4056_2_3	-	VC51
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.51065	50.9	-	LYEC01	436	5011	4243	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440971	GCA_001687965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/965/GCA_001687965.1_ASM168796v1	28028547	CDPH_C81
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.10126	41	-	CDSI01	56	2078	1986	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233759	GCA_000876935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/935/GCA_000876935.1_Velvet_assembly	-	B18E
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.08234	35.5	-	FJRO01	153	2121	2007	9/30/16	3/21/17	Contig	INSTITUT PASTEUR	SAMEA3888262	GCA_900073955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/955/GCA_900073955.1_VSA110	-	-
Acinetobacter baumannii 25493_9	1311023	PRJNA195101	195101	Proteobacteria	Gammaproteobacteria	3.94967	39	-	JHCW01	76	3819	3578	3/26/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644704	GCA_000600895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/895/GCA_000600895.1_ASM60089v1	-	25493_9
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.11425	65.8	-	CVWV01	265	6913	6590	6/24/15	3/18/17	Contig	PHE	SAMEA3374645	GCA_001181525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/525/GCA_001181525.1_P52_1_London_26_VIM_2_02_13	-	P52_1_London_26_VIM_2_02_13
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16896	51.5	-	FEZP01	101	2532	2151	2/9/16	3/21/17	Scaffold	SC	SAMEA2674203	GCA_900034235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/235/GCA_900034235.1_14555_5_33	-	2842STDY5881374
Helicobacter pylori	210	PRJNA231221	231221	Proteobacteria	delta/epsilon subdivisions	1.81837	38.9	-	NJFC01	3	1853	1013	6/23/17	6/23/17	Contig	US Food and Drug Administration 	SAMN06173312	GCA_002206465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/465/GCA_002206465.1_ASM220646v1	-	FDAARGOS_299
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.04168	39.6	-	CPSJ01	69	2228	1998	3/23/15	3/4/17	Contig	SC	SAMEA1020860	GCA_001112785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/785/GCA_001112785.1_6259_1_1	-	SN23563
Escherichia coli KTE101	1182700	PRJNA164943	164943	Proteobacteria	Gammaproteobacteria	5.01261	50.3	-	ANWD01	6	5138	4763	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854652	GCA_000352505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/505/GCA_000352505.1_Esch_coli_KTE101_V1	-	KTE101
Mycobacterium tuberculosis TKK-01-0040	1324250	PRJNA198135	198135	Terrabacteria group	Actinobacteria	4.41597	65.6	-	JLYH01	1	4293	4126	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053773	GCA_000660865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/865/GCA_000660865.1_Myco_tube_TKK-01-0040_V1	-	TKK-01-0040
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.99437	37.9	-	MDMR01	24	3004	2922	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410700	GCA_001709385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/385/GCA_001709385.1_ASM170938v1	-	Lm213
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.63682	30.4	-	MOWG01	20	1706	1595	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04442359	GCA_001877905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/905/GCA_001877905.1_ASM187790v1	-	CDPHFDLB-F12M00521-3g3b
Salmonella enterica subsp. enterica serovar Enteritidis str. 648900 1-16	984222	PRJNA62813	62813	Proteobacteria	Gammaproteobacteria	4.7465	52	-	ALHL01	124	4912	4596	12/31/12	5/19/17	Contig	FDA	SAMN01041129	GCA_000330185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/185/GCA_000330185.1_ASM33018v1	23383127	648900 1-16
Staphylococcus aureus OCMM6003	1409476	PRJNA223796	223796	Terrabacteria group	Firmicutes	2.88869	32.8	-	JBRL01	13	3024	2866	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381537	GCA_000539695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/695/GCA_000539695.1_Stap_aure_OCMM6003_V1	-	OCMM6003
Staphylococcus aureus OCMM6002	1409477	PRJNA223797	223797	Terrabacteria group	Firmicutes	2.90137	32.9	-	JBRK01	49	3017	2856	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381538	GCA_000539715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/715/GCA_000539715.1_Stap_aure_OCMM6002_V1	-	OCMM6002
Salmonella enterica subsp. enterica serovar Enteritidis str. 648901 1-17	984223	PRJNA62815	62815	Proteobacteria	Gammaproteobacteria	4.71778	52	-	ALHM01	93	4860	4563	12/31/12	5/19/17	Contig	FDA	SAMN01041130	GCA_000330205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/205/GCA_000330205.1_ASM33020v1	23383127	648901 1-17
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.63797	30.4	-	MOWF01	24	1709	1596	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04442356	GCA_001877935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/935/GCA_001877935.1_ASM187793v1	-	CDPHFDLB-F12M00521-3k2a
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.93791	37.9	-	MDMP01	40	2987	2891	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410706	GCA_001709395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/395/GCA_001709395.1_ASM170939v1	-	Lm216
Mycobacterium tuberculosis TKK-01-0041	1324251	PRJNA198136	198136	Terrabacteria group	Actinobacteria	4.40447	65.5	-	JLYG01	4	4278	4120	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053774	GCA_000660885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/885/GCA_000660885.1_Myco_tube_TKK-01-0041_V1	-	TKK-01-0041
Escherichia coli KTE115	1182707	PRJNA164957	164957	Proteobacteria	Gammaproteobacteria	5.17466	50.6	-	ANWE01	5	5260	4918	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854659	GCA_000352525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/525/GCA_000352525.1_Esch_coli_KTE115_V1	-	KTE115
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05184	39.6	-	CNWF02	192	2222	2001	3/22/15	3/5/17	Contig	SC	SAMEA1032594	GCA_001112825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/825/GCA_001112825.2_7001_1_19	-	R34-3096
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.20144	51.5	-	FFAK01	83	2564	2189	2/9/16	3/21/17	Scaffold	SC	SAMEA2674248	GCA_900034245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/245/GCA_900034245.1_14555_5_54	-	2842STDY5881395
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.11675	65.8	-	CVWU01	194	6906	6645	6/23/15	3/18/17	Contig	PHE	SAMEA3374646	GCA_001181545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/545/GCA_001181545.1_P51_2_London_11_VIM_2_02_13	-	P51_2_London_11_VIM_2_02_13
Acinetobacter baumannii 44362_10	1311044	PRJNA195122	195122	Proteobacteria	Gammaproteobacteria	4.11925	39.3	-	JHCR01	107	4040	3755	3/26/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644709	GCA_000600915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/915/GCA_000600915.1_ASM60091v1	-	44362_10
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.08634	35.4	-	FJRN01	138	2125	2016	9/30/16	3/21/17	Contig	INSTITUT PASTEUR	SAMEA3888266	GCA_900073965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/965/GCA_900073965.1_VSA114	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.15228	41	-	CEAU01	168	2131	1941	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234110	GCA_000876955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/955/GCA_000876955.1_Velvet_assembly	-	V32E
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.57331	50.8	-	LYER01	487	5225	4232	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440956	GCA_001687985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/985/GCA_001687985.1_ASM168798v1	28028547	CDPH_C32
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.00313	47.3	-	CWPI01	263	3488	3464	7/16/15	7/16/15	Scaffold	SC	SAMEA889379	GCA_001253835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/835/GCA_001253835.1_4056_5_11	-	A49
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.27024	29.1	-	FAJD01	1218	3903	3684	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664322	GCA_900015275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/275/GCA_900015275.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae 120_1020	1304918	PRJNA193162	193162	Proteobacteria	Gammaproteobacteria	5.54262	57.2	-	ARSO01	232	5646	5452	7/1/13	2/21/17	Contig	JCVI	SAMN02141705	GCA_000417385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/385/GCA_000417385.1_gkp51v01	24913165	120_1020
Vibrio parahaemolyticus	670	PRJNA255173	255173	Proteobacteria	Gammaproteobacteria	5.41037	45.2	-	JPKV01	97	5140	4928	7/29/14	3/24/17	Scaffold	National Cheng Kung University	SAMN02910586	GCA_000736345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/345/GCA_000736345.1_ASM73634v1	25189578	NCKU_TN_S02
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.17941	37.4	-	FXIZ01	165	3313	3088	4/26/17	5/6/17	Scaffold	SC	SAMEA3893486	GCA_900179775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/775/GCA_900179775.1_19789_6_94	-	VREN1845
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.82589	31.2	-	MKEX01	46	1930	1822	12/21/16	3/21/17	Contig	University of California at Davis	SAMN04532424	GCA_001912905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/905/GCA_001912905.1_ASM191290v1	-	BCW_6946
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.192	64	-	FSBK01	29	5293	5140	12/14/16	3/21/17	Scaffold	SC	SAMEA2259582	GCA_900132205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/205/GCA_900132205.1_11861_7_46	-	777
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.91996	64.1	-	FVEQ01	15	4899	4734	3/10/17	3/18/17	Scaffold	SC	SAMEA2259668	GCA_900132215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/215/GCA_900132215.1_11893_6_27	-	863
Campylobacter coli	195	PRJNA353352	353352	Proteobacteria	delta/epsilon subdivisions	1.76297	31.3	-	MPIQ01	63	1842	1641	3/6/17	3/8/17	Contig	Uppsala University	SAMN06014517	GCA_002019865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/865/GCA_002019865.1_ASM201986v1	-	VA6
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.99115	37.7	-	FXJM01	153	3104	2904	4/26/17	5/6/17	Scaffold	SC	SAMEA3893498	GCA_900179785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/785/GCA_900179785.1_19789_6_99	-	VREN1874
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.28531	45.2	-	LBHP01	246	5101	4866	5/14/15	3/26/17	Scaffold	University of New Hampshire	SAMN03107386	GCA_001007525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/525/GCA_001007525.1_ASM100752v1	25832299	MAVP-E
Klebsiella pneumoniae 140_1040	1304916	PRJNA193160	193160	Proteobacteria	Gammaproteobacteria	5.49875	57.3	-	ARSP01	206	5575	5402	7/1/13	2/21/17	Contig	JCVI	SAMN02141988	GCA_000417405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/405/GCA_000417405.1_gkp49v01	24913165	140_1040
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.17772	28.8	-	FADP01	828	3778	3626	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664176	GCA_900015325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/325/GCA_900015325.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.06326	46.8	-	CWQD01	122	3935	3894	7/16/15	7/16/15	Scaffold	SC	SAMEA889213	GCA_001254255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/255/GCA_001254255.1_4056_8_2	-	A481
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.60695	50.8	-	LYEO01	468	5188	4283	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440959	GCA_001687995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/687/995/GCA_001687995.1_ASM168799v1	28028547	CDPH_C35
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.0483	41.2	-	CDVB01	79	2028	1932	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233780	GCA_000876975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/975/GCA_000876975.1_Velvet_assembly	-	B33Z
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.16111	35.6	-	FJRS01	146	2200	2073	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888267	GCA_900073975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/975/GCA_900073975.1_VSA115	-	-
Acinetobacter baumannii 44362_1	1311035	PRJNA195113	195113	Proteobacteria	Gammaproteobacteria	4.02086	39.2	-	JHCQ01	124	3988	3675	3/26/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02644710	GCA_000600935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/600/935/GCA_000600935.1_ASM60093v1	-	44362_1
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.1267	65.8	-	CVWW01	249	6922	6612	6/24/15	3/18/17	Contig	PHE	SAMEA3374647	GCA_001181565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/565/GCA_001181565.1_P52_2_London_26_VIM_2_02_13	-	P52_2_London_26_VIM_2_02_13
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.1264	51.7	-	FFBP01	91	2496	2154	2/9/16	3/19/17	Scaffold	SC	SAMEA2674310	GCA_900034255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/255/GCA_900034255.1_14555_5_85	-	2842STDY5881426
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08855	39.6	-	CNQT02	231	2271	2067	3/23/15	3/11/17	Contig	SC	SAMEA1032582	GCA_001113125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/125/GCA_001113125.2_6952_7_7	-	R34-3168
Escherichia coli KTE118	1182709	PRJNA164961	164961	Proteobacteria	Gammaproteobacteria	5.22722	50.6	-	ANWF01	3	5381	5078	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854661	GCA_000352545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/545/GCA_000352545.1_Esch_coli_KTE118_V1	-	KTE118
Mycobacterium tuberculosis TKK-01-0042	1324252	PRJNA198137	198137	Terrabacteria group	Actinobacteria	4.43678	65.4	-	JLYF01	7	4291	4110	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053775	GCA_000660905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/905/GCA_000660905.1_Myco_tube_TKK-01-0042_V1	-	TKK-01-0042
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.99413	37.9	-	MDMQ01	29	2998	2924	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410702	GCA_001709445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/445/GCA_001709445.1_ASM170944v1	-	Lm215
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.63615	30.4	-	MOWE01	19	1705	1596	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04442357	GCA_001877945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/945/GCA_001877945.1_ASM187794v1	-	CDPHFDLB-F12M00521-3k2b
Salmonella enterica subsp. enterica serovar Enteritidis str. 648902 6-8	984225	PRJNA62819	62819	Proteobacteria	Gammaproteobacteria	4.71967	52	-	ALHO01	74	4868	4541	12/31/12	5/19/17	Contig	FDA	SAMN01041134	GCA_000330245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/245/GCA_000330245.1_ASM33024v1	23383127	648902 6-8
Staphylococcus aureus HOAG6017	1409478	PRJNA223798	223798	Terrabacteria group	Firmicutes	2.93597	32.8	-	JBRJ01	13	3112	2947	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381539	GCA_000539735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/735/GCA_000539735.1_Stap_aure_HOAG6017_V1	-	HOAG6017
Staphylococcus aureus LAMC0010	1409479	PRJNA223799	223799	Terrabacteria group	Firmicutes	2.92488	32.9	-	JBRI01	32	3084	2908	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381540	GCA_000539755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/755/GCA_000539755.1_Stap_aure_LAMC0010_V1	-	LAMC0010
Salmonella enterica subsp. enterica serovar Enteritidis str. 648903 1-6	984226	PRJNA62821	62821	Proteobacteria	Gammaproteobacteria	4.71092	52	-	ALHP01	102	4863	4538	12/31/12	5/19/17	Contig	FDA	SAMN01041135	GCA_000330265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/265/GCA_000330265.1_ASM33026v1	23383127	648903 1-6
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.63621	30.4	-	MOWD01	22	1707	1599	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04442360	GCA_001877975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/975/GCA_001877975.1_ASM187797v1	-	CDPHFDLB-F12M00521-8g1a
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.0211	37.9	-	MDMB01	34	3075	2985	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410654	GCA_001709455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/455/GCA_001709455.1_ASM170945v1	-	Lm106
Mycobacterium tuberculosis TKK-01-0043	1324253	PRJNA198138	198138	Terrabacteria group	Actinobacteria	4.40083	65.5	-	JLYE01	5	4295	4096	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053776	GCA_000660925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/925/GCA_000660925.1_Myco_tube_TKK-01-0043_V1	-	TKK-01-0043
Escherichia coli KTE123	1182712	PRJNA164967	164967	Proteobacteria	Gammaproteobacteria	5.18039	50.6	-	ANWG01	5	5369	5050	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854664	GCA_000352565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/565/GCA_000352565.1_Esch_coli_KTE123_V1	-	KTE123
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.08168	39.8	-	CKIJ01	102	2256	1989	3/21/15	3/15/17	Contig	SC	SAMEA1024031	GCA_001113165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/165/GCA_001113165.1_6631_3_6	-	type strain: N
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.19993	51.6	-	FFDG01	99	2538	2143	2/9/16	3/21/17	Scaffold	SC	SAMEA2674221	GCA_900034265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/265/GCA_900034265.1_14555_6_34	-	2842STDY5881471
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.13649	65.8	-	CWER01	375	7020	6614	6/23/15	3/18/17	Contig	PHE	SAMEA3374648	GCA_001181585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/585/GCA_001181585.1_P53_London_9_VIM_2_02_13	-	P53_London_9_VIM_2_02_13
Acinetobacter baumannii 16553_6	1311103	PRJNA195186	195186	Proteobacteria	Gammaproteobacteria	4.22252	39.2	-	JHPI01	94	4174	3909	3/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646224	GCA_000611045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/045/GCA_000611045.1_ASM61104v1	-	16553_6
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.1303	35.3	-	FJRQ01	136	2171	2045	9/30/16	3/21/17	Contig	INSTITUT PASTEUR	SAMEA3888268	GCA_900073985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/985/GCA_900073985.1_VSA116	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.01666	41.2	-	CDXL01	58	2027	1926	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234046	GCA_000876995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/995/GCA_000876995.1_Velvet_assembly	-	S2X
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.74774	50.8	-	LYEM01	483	5422	4411	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440961	GCA_001688025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/025/GCA_001688025.1_ASM168802v1	28028547	CDPH_C37
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.00311	46.8	-	CWQJ01	102	3892	3867	7/17/15	7/17/15	Scaffold	SC	SAMEA889218	GCA_001254395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/395/GCA_001254395.1_4056_8_7	-	A325
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.15082	28.6	-	FADN01	471	3798	3669	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664178	GCA_900015335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/335/GCA_900015335.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae 280_1220	1304919	PRJNA193163	193163	Proteobacteria	Gammaproteobacteria	5.40639	57.4	-	ARSQ01	153	5459	5292	7/1/13	2/21/17	Contig	JCVI	SAMN02141990	GCA_000417425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/425/GCA_000417425.1_gkp52v01	24913165	280_1220
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.11319	45.3	-	LBHN01	24	4955	4711	5/14/15	3/26/17	Scaffold	University of New Hampshire	SAMN03177810	GCA_001007535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/535/GCA_001007535.1_ASM100753v1	25832299	MAVP-45
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.19402	37.4	-	FXIY01	163	3362	3099	4/26/17	5/6/17	Scaffold	SC	SAMEA3893481	GCA_900179795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/795/GCA_900179795.1_19789_6_92	-	VREN1843
Campylobacter coli	195	PRJNA353352	353352	Proteobacteria	delta/epsilon subdivisions	1.66244	31.7	-	MPIR01	22	1674	1594	3/6/17	3/8/17	Contig	Uppsala University	SAMN06014518	GCA_002019885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/885/GCA_002019885.1_ASM201988v1	-	VA7
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.91967	64.1	-	FVEV01	17	4895	4733	3/10/17	3/18/17	Scaffold	SC	SAMEA2259670	GCA_900132225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/225/GCA_900132225.1_11893_6_29	-	865
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.92022	64.1	-	FVEN01	18	4903	4740	3/10/17	3/18/17	Scaffold	SC	SAMEA2259669	GCA_900132235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/235/GCA_900132235.1_11893_6_28	-	864
Campylobacter coli	195	PRJNA353352	353352	Proteobacteria	delta/epsilon subdivisions	1.68208	31.7	-	MPIT01	23	1700	1606	3/6/17	3/8/17	Contig	Uppsala University	SAMN06014563	GCA_002019955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/955/GCA_002019955.1_ASM201995v1	-	VA15
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.19624	37.4	-	FXJV01	162	3335	3096	4/26/17	5/6/17	Scaffold	SC	SAMEA3893721	GCA_900179835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/835/GCA_900179835.1_19789_7_26	-	VREN1780
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.20416	45.3	-	LBHO01	39	5043	4801	5/14/15	3/26/17	Scaffold	University of New Hampshire	SAMN03177809	GCA_001007545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/545/GCA_001007545.1_ASM100754v1	25832299	MAVP-V
Klebsiella pneumoniae UHKPC67	1284792	PRJNA187284	187284	Proteobacteria	Gammaproteobacteria	5.54167	57.1	-	ARSL01	151	5620	5450	7/1/13	2/21/17	Contig	JCVI	SAMN02142023	GCA_000417445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/445/GCA_000417445.1_gkp6v01	24913165	UHKPC67
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.17558	29	-	FAGA01	1320	3829	3616	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664240	GCA_900015345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/345/GCA_900015345.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.01949	47.3	-	CWOP01	93	3544	3500	7/16/15	7/16/15	Scaffold	SC	SAMEA889342	GCA_001254575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/575/GCA_001254575.1_4056_6_1	-	A103
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.73543	50.8	-	LYEJ01	487	5408	4421	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440964	GCA_001688045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/045/GCA_001688045.1_ASM168804v1	28028547	CDPH_C40
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05179	41.1	-	CDXB01	54	2042	1947	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233999	GCA_000877075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/075/GCA_000877075.1_Velvet_assembly	-	S12Z
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.16019	35.6	-	FJRW01	157	2196	2073	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888269	GCA_900073995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/995/GCA_900073995.1_VSA117	-	-
Acinetobacter baumannii 16553_2	1311099	PRJNA195180	195180	Proteobacteria	Gammaproteobacteria	4.21446	39.2	-	JHPL01	111	4148	3907	3/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646221	GCA_000611065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/065/GCA_000611065.1_ASM61106v1	-	16553_2
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.22121	65.6	-	CWFR01	955	7318	6517	6/23/15	3/18/17	Contig	PHE	SAMEA3374649	GCA_001181605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/605/GCA_001181605.1_P54_1_London_24_VIM_2_04_13	-	P54_1_London_24_VIM_2_04_13
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15578	51.6	-	FFDK01	79	2506	2142	2/9/16	3/21/17	Scaffold	SC	SAMEA2674233	GCA_900034275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/275/GCA_900034275.1_14555_6_40	-	2842STDY5881477
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.20778	39.4	-	CMSW01	118	2460	2196	3/22/15	3/4/17	Contig	SC	SAMEA2062399	GCA_001113185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/185/GCA_001113185.1_9803_8_81	-	6B
Escherichia coli KTE135	1182718	PRJNA164979	164979	Proteobacteria	Gammaproteobacteria	4.78098	50.8	-	ANWH01	2	4802	4560	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854670	GCA_000352585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/585/GCA_000352585.1_Esch_coli_KTE135_V1	-	KTE135
Mycobacterium tuberculosis TKK-01-0044	1324254	PRJNA198139	198139	Terrabacteria group	Actinobacteria	4.41495	65.6	-	JLYD01	41	4327	4119	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053777	GCA_000660945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/945/GCA_000660945.1_Myco_tube_TKK-01-0044_V1	-	TKK-01-0044
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.93946	37.8	-	MDMI01	44	2978	2889	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410734	GCA_001709465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/465/GCA_001709465.1_ASM170946v1	-	Lm233
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.63342	30.4	-	MOWC01	26	1706	1595	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04442361	GCA_001877985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/985/GCA_001877985.1_ASM187798v1	-	CDPHFDLB-F12M00521-8g1b
Salmonella enterica subsp. enterica serovar Enteritidis str. 648904 3-6	984227	PRJNA62823	62823	Proteobacteria	Gammaproteobacteria	4.71486	52	-	ALHQ01	261	4974	4525	12/31/12	5/19/17	Contig	FDA	SAMN01041136	GCA_000330285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/285/GCA_000330285.1_ASM33028v1	23383127	648904 3-6
Staphylococcus aureus LAMC0011	1409480	PRJNA223800	223800	Terrabacteria group	Firmicutes	3.02127	32.7	-	JBRH01	45	3201	3013	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381541	GCA_000539775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/775/GCA_000539775.1_Stap_aure_LAMC0011_V1	-	LAMC0011
Staphylococcus aureus LAMC0013	1409481	PRJNA223801	223801	Terrabacteria group	Firmicutes	2.91973	32.7	-	JBRG01	11	3071	2920	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381542	GCA_000539795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/795/GCA_000539795.1_Stap_aure_LAMC0013_V1	-	LAMC0013
Salmonella enterica subsp. enterica serovar Enteritidis str. 653049 13-19	984229	PRJNA62827	62827	Proteobacteria	Gammaproteobacteria	4.73286	52	-	ALHR01	74	4884	4561	12/31/12	5/19/17	Contig	FDA	SAMN01041138	GCA_000330305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/305/GCA_000330305.1_ASM33030v1	23383127	653049 13-19
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.63688	30.4	-	MOWB01	25	1709	1595	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04442362	GCA_001878015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/015/GCA_001878015.1_ASM187801v1	-	CDPHFDLB-F12M00521-8k1a
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.99579	37.9	-	MDMO01	23	3014	2933	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410707	GCA_001709485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/485/GCA_001709485.1_ASM170948v1	-	Lm217
Mycobacterium tuberculosis TKK-01-0045	1324255	PRJNA198140	198140	Terrabacteria group	Actinobacteria	4.4043	65.5	-	JLYC01	2	4265	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053778	GCA_000660965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/965/GCA_000660965.1_Myco_tube_TKK-01-0045_V1	-	TKK-01-0045
Escherichia coli KTE136	1182719	PRJNA164981	164981	Proteobacteria	Gammaproteobacteria	4.72997	50.8	-	ANWI01	7	4831	4539	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854671	GCA_000352605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/605/GCA_000352605.1_Esch_coli_KTE136_V1	-	KTE136
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08227	39.5	-	CKTR01	63	2299	2085	3/21/15	3/4/17	Contig	SC	SAMEA1025821	GCA_001113205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/205/GCA_001113205.1_6823_2_13	-	SMRU1885
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.17375	51.5	-	FEPJ01	79	2529	2169	2/9/16	3/21/17	Scaffold	SC	SAMEA2673800	GCA_900034525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/525/GCA_900034525.1_14355_4_11	-	2842STDY5880968
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.13707	65.8	-	CVUW01	241	6903	6616	6/24/15	3/18/17	Contig	PHE	SAMEA3374650	GCA_001181625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/625/GCA_001181625.1_E8_London_17_VIM_2_04_13	-	E8_London_17_VIM_2_04_13
Acinetobacter baumannii 16553_4	1311101	PRJNA195182	195182	Proteobacteria	Gammaproteobacteria	4.1932	39.1	-	JHPJ01	83	4130	3908	3/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646223	GCA_000611085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/085/GCA_000611085.1_ASM61108v1	-	16553_4
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.0749	35.5	-	FJRX01	166	2112	2000	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888270	GCA_900074005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/005/GCA_900074005.1_VSA118	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.06487	41.1	-	CEBX01	61	2057	1953	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234125	GCA_000877095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/095/GCA_000877095.1_Velvet_assembly	-	V39F
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.66229	50.9	-	LYED01	421	5042	4510	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440970	GCA_001688055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/055/GCA_001688055.1_ASM168805v1	28028547	CDPH_C80
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.94949	47.7	-	CWPB01	141	3382	3333	7/17/15	7/17/15	Scaffold	SC	SAMEA889382	GCA_001254735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/735/GCA_001254735.1_4056_5_8	-	A50
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.09154	29	-	FAHO01	1189	3744	3504	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664279	GCA_900015355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/355/GCA_900015355.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae UHKPC179	1284818	PRJNA187310	187310	Proteobacteria	Gammaproteobacteria	5.51599	57.1	-	ARSM01	174	5465	5263	7/1/13	2/20/17	Contig	JCVI	SAMN02141974	GCA_000417465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/465/GCA_000417465.1_gkp32v01	24913165	UHKPC179
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.23182	45.2	-	LBHF01	39	5161	4890	6/9/15	8/21/17	Scaffold	University of New Hampshire	SAMN03177811	GCA_001023125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/125/GCA_001023125.1_ASM102312v1	25904905	CT4287
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.20195	37.4	-	FXJO01	205	3330	3093	4/26/17	5/6/17	Scaffold	SC	SAMEA3893476	GCA_900179845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/845/GCA_900179845.1_19789_6_90	-	VREN1841
Campylobacter coli	195	PRJNA353352	353352	Proteobacteria	delta/epsilon subdivisions	1.77393	31.8	-	MPIW01	31	1811	1721	3/6/17	3/8/17	Contig	Uppsala University	SAMN06014569	GCA_002019975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/975/GCA_002019975.1_ASM201997v1	-	VA38
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.91953	64.1	-	FVET01	14	4894	4737	3/10/17	3/18/17	Scaffold	SC	SAMEA2259671	GCA_900132245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/245/GCA_900132245.1_11893_6_30	-	866
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.52842	64	-	FVEY01	35	5683	5476	3/10/17	3/18/17	Scaffold	SC	SAMEA2259692	GCA_900132255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/255/GCA_900132255.1_11893_6_49	-	887
Campylobacter coli	195	PRJNA353352	353352	Proteobacteria	delta/epsilon subdivisions	1.95448	31.1	-	MPIX01	50	2005	1855	3/6/17	3/8/17	Contig	Uppsala University	SAMN06014570	GCA_002019985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/985/GCA_002019985.1_ASM201998v1	-	VA46
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.20082	37.4	-	FXIX01	208	3336	3087	4/26/17	5/6/17	Scaffold	SC	SAMEA3893597	GCA_900179855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/855/GCA_900179855.1_19789_6_80	-	VREN1810
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	5.25686	45.1	-	LBHG01	287	5054	4832	6/9/15	3/26/17	Scaffold	University of New Hampshire	SAMN03177808	GCA_001023155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/155/GCA_001023155.1_ASM102315v1	25904905	MAVP-M
Klebsiella pneumoniae DMC0799	1284797	PRJNA187289	187289	Proteobacteria	Gammaproteobacteria	5.43161	57.2	-	ARRZ01	120	5426	5253	7/1/13	2/21/17	Contig	JCVI	SAMN02141980	GCA_000417485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/485/GCA_000417485.1_gkp11v01	24913165	DMC0799
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.25395	29	-	FALA01	1492	3862	3624	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664369	GCA_900015365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/365/GCA_900015365.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.90418	47.6	-	CWRE01	448	3972	3943	7/17/15	7/17/15	Scaffold	SC	SAMEA889168	GCA_001254855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/855/GCA_001254855.1_4075_3_8	-	GP106
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.74083	51	-	LYDZ01	452	5134	4574	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440978	GCA_001688075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/075/GCA_001688075.1_ASM168807v1	28028547	CDPH_C97
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04803	41.2	-	CDTN01	56	2040	1944	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233796	GCA_000877115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/115/GCA_000877115.1_Velvet_assembly	-	B44O
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.13076	35.3	-	FJRU01	130	2167	2050	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888271	GCA_900074015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/015/GCA_900074015.1_VSA119	-	-
Acinetobacter baumannii 16553_3	1311100	PRJNA195181	195181	Proteobacteria	Gammaproteobacteria	4.0794	38.9	-	JHPK01	163	4027	3769	3/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646222	GCA_000611105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/105/GCA_000611105.1_ASM61110v1	-	16553_3
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.11065	65.8	-	CVUN01	201	6874	6600	6/23/15	3/18/17	Contig	PHE	SAMEA3374651	GCA_001181645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/645/GCA_001181645.1_E9_London_17_VIM_2_04_13	-	E9_London_17_VIM_2_04_13
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16963	51.5	-	FERS01	72	2515	2171	2/9/16	3/21/17	Scaffold	SC	SAMEA2673996	GCA_900034535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/535/GCA_900034535.1_14355_4_71	-	2842STDY5881028
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.20042	39.4	-	CMGW01	91	2412	2175	3/23/15	3/11/17	Contig	SC	SAMEA1029402	GCA_001113285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/285/GCA_001113285.1_7038_5_12	-	SMRU2964
Escherichia coli KTE140	1182720	PRJNA164983	164983	Proteobacteria	Gammaproteobacteria	5.08947	50.6	-	ANWJ01	5	5213	4933	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854672	GCA_000352625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/625/GCA_000352625.1_Esch_coli_KTE140_V1	-	KTE140
Mycobacterium tuberculosis TKK-01-0046	1324256	PRJNA198141	198141	Terrabacteria group	Actinobacteria	4.40338	65.5	-	JLYB01	7	4304	4089	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053779	GCA_000660985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/660/985/GCA_000660985.1_Myco_tube_TKK-01-0046_V1	-	TKK-01-0046
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.05104	37.7	-	MDLY01	35	3134	3044	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410689	GCA_001709525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/525/GCA_001709525.1_ASM170952v1	-	Lm190
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.63891	30.4	-	MOWA01	34	1712	1599	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04445877	GCA_001878025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/025/GCA_001878025.1_ASM187802v1	-	CDPHFDLB-F12M00521-8k1b
Salmonella enterica subsp. enterica serovar Enteritidis str. 561362 9-7	984232	PRJNA62833	62833	Proteobacteria	Gammaproteobacteria	4.69448	52.1	-	ALHT01	91	4842	4506	12/31/12	5/19/17	Contig	FDA	SAMN01041102	GCA_000330345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/345/GCA_000330345.1_ASM33034v1	23383127	561362 9-7
Staphylococcus aureus AMMC6015	1409484	PRJNA223804	223804	Terrabacteria group	Firmicutes	2.91769	32.7	-	JBRD01	15	3070	2907	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381545	GCA_000539815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/815/GCA_000539815.1_Stap_aure_AMMC6015_V1	-	AMMC6015
Staphylococcus aureus AMMC6014	1409485	PRJNA223805	223805	Terrabacteria group	Firmicutes	2.91505	32.8	-	JBRC01	26	3016	2872	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381546	GCA_000539835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/835/GCA_000539835.1_Stap_aure_AMMC6014_V1	-	AMMC6014
Salmonella enterica subsp. enterica serovar Enteritidis str. 543463 42-20	984233	PRJNA62835	62835	Proteobacteria	Gammaproteobacteria	4.75151	51.4	-	ALHU01	142	786	697	12/31/12	5/19/17	Contig	FDA	SAMN01041099	GCA_000330365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/365/GCA_000330365.1_ASM33036v1	23383127	543463 42-20
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.71599	30.3	-	MOVZ01	27	1823	1688	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04442363	GCA_001878035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/035/GCA_001878035.1_ASM187803v1	-	CDPHFDLB-F12M00554-a2
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.05379	37.9	-	MDMA01	27	3126	3039	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410571	GCA_001709545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/545/GCA_001709545.1_ASM170954v1	-	Lm14
Mycobacterium tuberculosis TKK-01-0047	1324257	PRJNA198142	198142	Terrabacteria group	Actinobacteria	4.41623	65.5	-	JLYA01	10	4301	4091	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053780	GCA_000661005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/005/GCA_000661005.1_Myco_tube_TKK-01-0047_V1	-	TKK-01-0047
Escherichia coli KTE141	1182721	PRJNA164985	164985	Proteobacteria	Gammaproteobacteria	5.02912	50.6	-	ANWK01	7	5099	4809	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854673	GCA_000352645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/645/GCA_000352645.1_Esch_coli_KTE141_V1	-	KTE141
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11868	39.5	-	CLVI01	38	2316	2062	3/21/15	3/11/17	Contig	SC	SAMEA1026101	GCA_001113345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/345/GCA_001113345.1_6983_3_64	-	SMRU2272
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.1527	51.6	-	FERT01	79	2498	2152	2/9/16	3/21/17	Scaffold	SC	SAMEA2674008	GCA_900034545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/545/GCA_900034545.1_14355_4_75	-	2842STDY5881032
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.21807	65.6	-	CVXL01	279	7023	6715	6/24/15	3/18/17	Contig	PHE	SAMEA3374652	GCA_001181665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/665/GCA_001181665.1_P54_2_London_24_VIM_2_04_13	-	P54_2_London_24_VIM_2_04_13
Acinetobacter baumannii 16553_10	1311107	PRJNA195204	195204	Proteobacteria	Gammaproteobacteria	4.24632	39.2	-	JHPF01	89	4160	3907	3/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646747	GCA_000611165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/165/GCA_000611165.1_ASM61116v1	-	16553_10
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.19164	35.5	-	FJRT01	133	2239	2118	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888272	GCA_900074025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/025/GCA_900074025.1_VSA121	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	1.96933	41.3	-	CDSJ01	61	1958	1869	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233758	GCA_000877135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/135/GCA_000877135.1_Velvet_assembly	-	B17H
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.61891	50.9	-	LXUX01	417	5097	4369	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440986	GCA_001688135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/135/GCA_001688135.1_ASM168813v1	28028547	CDPH_C115
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.04052	47.1	-	CWOR01	87	3479	3440	7/16/15	7/16/15	Scaffold	SC	SAMEA889313	GCA_001254915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/254/915/GCA_001254915.1_4056_6_12	-	A180
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.30104	29.1	-	CZXB01	1920	3835	3670	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3663996	GCA_900015525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/525/GCA_900015525.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae UHKPC17	1284805	PRJNA187297	187297	Proteobacteria	Gammaproteobacteria	5.61682	57.1	-	ARSG01	186	5705	5511	7/1/13	2/21/17	Contig	JCVI	SAMN02141975	GCA_000417545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/545/GCA_000417545.1_gkp19v01	24913165	UHKPC17
Vibrio parahaemolyticus	670	PRJNA233509	233509	Proteobacteria	Gammaproteobacteria	5.15402	45.3	-	LFUJ01	14	4955	4718	8/19/15	4/10/17	Scaffold	Omics Solutions	SAMN02781338	GCA_001270815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/815/GCA_001270815.1_ASM127081v1	-	PMC58.5
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.19827	37.4	-	FXJB01	213	3328	3092	4/26/17	5/6/17	Scaffold	SC	SAMEA3893600	GCA_900179865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/865/GCA_900179865.1_19789_6_81	-	VREN1811
Campylobacter coli	195	PRJNA353352	353352	Proteobacteria	delta/epsilon subdivisions	1.83107	31.2	-	MPIS01	42	1893	1729	3/6/17	3/8/17	Contig	Uppsala University	SAMN06014562	GCA_002020015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/015/GCA_002020015.1_ASM202001v1	-	VA8
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.84584	64.2	-	FVEW01	7	4863	4718	3/10/17	3/18/17	Scaffold	SC	SAMEA2259689	GCA_900132265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/265/GCA_900132265.1_11893_6_46	-	884
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.7225	64.3	-	FVES01	10	4713	4575	3/10/17	3/18/17	Scaffold	SC	SAMEA2259645	GCA_900132275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/275/GCA_900132275.1_11893_6_7	-	840
Campylobacter coli	195	PRJNA353352	353352	Proteobacteria	delta/epsilon subdivisions	1.82644	31.2	-	MPIU01	33	1908	1757	3/6/17	3/8/17	Contig	Uppsala University	SAMN06014565	GCA_002020035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/035/GCA_002020035.1_ASM202003v1	-	VA24
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.94153	37.9	-	FXJS01	148	3058	2843	4/26/17	5/6/17	Scaffold	SC	SAMEA3893760	GCA_900179885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/885/GCA_900179885.1_19789_7_108	-	VREN3654
Vibrio parahaemolyticus	670	PRJNA233509	233509	Proteobacteria	Gammaproteobacteria	5.16317	45.3	-	LFUM01	23	4949	4690	8/19/15	3/26/17	Scaffold	Omics Solutions	SAMN02781339	GCA_001270825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/825/GCA_001270825.1_ASM127082v1	-	PMC58.7
Klebsiella pneumoniae subsp. pneumoniae MP14	1341693	PRJNA206542	206542	Proteobacteria	Gammaproteobacteria	5.66162	57	-	ATAK01	186	5771	5525	7/22/13	2/21/17	Contig	"Chunlab, Inc."	SAMN02469602	GCA_000439165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/165/GCA_000439165.1_KKPNMP14	-	MP14
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.1628	28.7	-	CZWS01	1497	3770	3560	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664000	GCA_900015535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/535/GCA_900015535.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.00539	47.2	-	CWPW01	76	3579	3526	7/16/15	7/16/15	Scaffold	SC	SAMEA889302	GCA_001255295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/295/GCA_001255295.1_4056_7_8	-	A200
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.51612	50.9	-	LXUY01	427	4825	4284	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440985	GCA_001688145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/145/GCA_001688145.1_ASM168814v1	28028547	CDPH_C114
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05958	41.1	-	CEAT01	62	2047	1951	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234107	GCA_000877175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/175/GCA_000877175.1_Velvet_assembly	-	type strain: V30
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.01743	35.4	-	FJRR01	112	2033	1917	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888213	GCA_900074035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/035/GCA_900074035.1_VSA17	-	-
Acinetobacter baumannii 16553_9	1311106	PRJNA195200	195200	Proteobacteria	Gammaproteobacteria	4.21605	39.2	-	JHPG01	98	4169	3901	3/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646230	GCA_000611185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/185/GCA_000611185.1_ASM61118v1	-	16553_9
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.13416	65.8	-	CVWX01	183	6892	6625	6/24/15	3/18/17	Contig	PHE	SAMEA3374653	GCA_001181685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/685/GCA_001181685.1_P55_London_26_VIM_2_05_13	-	P55_London_26_VIM_2_05_13
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12902	51.7	-	FETO01	76	2492	2167	2/9/16	3/19/17	Scaffold	SC	SAMEA2674024	GCA_900034565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/565/GCA_900034565.1_14355_5_81	-	2842STDY5881134
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.15226	39.7	-	CMVX01	89	2327	2037	3/22/15	3/11/17	Contig	SC	SAMEA1022887	GCA_001113445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/445/GCA_001113445.1_5756_6_2	-	278
Escherichia coli KTE144	1182724	PRJNA164991	164991	Proteobacteria	Gammaproteobacteria	4.89053	50.6	-	ANWL01	8	4883	4639	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854676	GCA_000352665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/665/GCA_000352665.1_Esch_coli_KTE144_V1	-	KTE144
Mycobacterium tuberculosis TKK-01-0048	1324258	PRJNA198143	198143	Terrabacteria group	Actinobacteria	4.42177	65.6	-	JLXZ01	2	4301	4132	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053781	GCA_000661025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/025/GCA_000661025.1_Myco_tube_TKK-01-0048_V1	-	TKK-01-0048
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.05743	37.8	-	MDMK01	33	3127	3039	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410723	GCA_001709555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/555/GCA_001709555.1_ASM170955v1	-	Lm229
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.71503	30.3	-	MOVY01	17	1818	1689	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04442364	GCA_001878065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/065/GCA_001878065.1_ASM187806v1	-	CDPHFDLB-F12M00554-a3
Salmonella enterica subsp. enterica serovar Enteritidis str. 648901 16-16	984234	PRJNA62837	62837	Proteobacteria	Gammaproteobacteria	4.72539	52	-	ALHV01	135	4917	4477	12/31/12	5/19/17	Contig	FDA	SAMN01041131	GCA_000330385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/385/GCA_000330385.1_ASM33038v1	23383127	648901 16-16
Staphylococcus aureus AMMC6013	1409486	PRJNA223806	223806	Terrabacteria group	Firmicutes	2.85179	32.8	-	JBRB01	17	2972	2802	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381547	GCA_000539855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/855/GCA_000539855.1_Stap_aure_AMMC6013_V1	-	AMMC6013
Staphylococcus aureus WMCS6001	1409488	PRJNA223808	223808	Terrabacteria group	Firmicutes	2.92423	32.9	-	JBQZ01	20	3092	2913	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381549	GCA_000539875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/875/GCA_000539875.1_Stap_aure_WMCS6001_V1	-	WMCS6001
Salmonella enterica subsp. enterica serovar Enteritidis str. 33944	997329	PRJNA63675	63675	Proteobacteria	Gammaproteobacteria	4.72536	52.1	-	ALHX01	103	4877	4502	12/31/12	5/19/17	Contig	FDA	SAMN01041091	GCA_000330425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/425/GCA_000330425.1_ASM33042v1	23383127	33944
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.61248	30.5	-	MOVX01	22	1687	1588	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04442365	GCA_001878095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/095/GCA_001878095.1_ASM187809v1	-	CDPHFDLB-F12M00558
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.99493	37.8	-	MDLZ01	26	3073	2975	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410573	GCA_001709565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/565/GCA_001709565.1_ASM170956v1	-	Lm15
Mycobacterium tuberculosis TKK-01-0049	1324259	PRJNA198144	198144	Terrabacteria group	Actinobacteria	4.4262	65.5	-	JLXY01	8	4308	4114	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053782	GCA_000661045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/045/GCA_000661045.1_Myco_tube_TKK-01-0049_V1	-	TKK-01-0049
Escherichia coli KTE146	1182725	PRJNA164993	164993	Proteobacteria	Gammaproteobacteria	5.28204	50.5	-	ANWM01	9	5334	5004	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854677	GCA_000352685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/685/GCA_000352685.1_Esch_coli_KTE146_V1	-	KTE146
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.04959	39.6	-	CLBH01	50	2241	2026	3/21/15	3/11/17	Contig	SC	SAMEA1025857	GCA_001113545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/545/GCA_001113545.1_6871_1_19	-	SMRU1795
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12123	51.8	-	FEUB01	93	2484	2152	2/9/16	3/19/17	Scaffold	SC	SAMEA2673804	GCA_900034575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/575/GCA_900034575.1_14355_6_14	-	2842STDY5881163
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.13208	65.8	-	CVVZ01	360	6977	6567	6/24/15	3/18/17	Contig	PHE	SAMEA3374654	GCA_001181705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/705/GCA_001181705.1_E10_London_26_VIM_2_06_13	-	E10_London_26_VIM_2_06_13
Acinetobacter baumannii 25569_1	1311108	PRJNA195209	195209	Proteobacteria	Gammaproteobacteria	4.10069	39.4	-	JHPE01	77	4019	3763	3/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646226	GCA_000611205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/205/GCA_000611205.1_ASM61120v1	-	25569_1
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.20321	35.4	-	FJRV01	142	2235	2131	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888212	GCA_900074045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/045/GCA_900074045.1_VSA16	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.10762	41	-	CDTP01	54	2092	1997	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233801	GCA_000877195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/195/GCA_000877195.1_Velvet_assembly	-	B48N
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.63044	50.8	-	LXUS01	422	5047	4428	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440991	GCA_001688185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/185/GCA_001688185.1_ASM168818v1	28028547	CDPH_C122
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.97166	47.1	-	CWPU01	116	3683	3642	7/16/15	7/16/15	Scaffold	SC	SAMEA889275	GCA_001256655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/655/GCA_001256655.1_4056_7_6	-	A209
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.17015	29	-	CZWO01	405	3833	3705	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3663991	GCA_900015555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/555/GCA_900015555.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae EGD-HP19-C	1357295	PRJNA211612	211612	Proteobacteria	Gammaproteobacteria	5.12164	57.6	-	AUTW02	107	5151	4872	8/7/13	2/21/17	Contig	National Environmental Engineering Research Institute-CSIR	SAMN02570520	GCA_000444855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/855/GCA_000444855.2_GS_De_Novo_Assembly	-	EGD-HP19-C
Vibrio parahaemolyticus	670	PRJNA233509	233509	Proteobacteria	Gammaproteobacteria	5.13697	45.3	-	LFUN01	23	4918	4674	8/19/15	3/26/17	Scaffold	Omics Solutions	SAMN02781333	GCA_001270885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/885/GCA_001270885.1_ASM127088v1	-	ATC210
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.20258	37.4	-	FXKA01	205	3341	3095	4/26/17	5/6/17	Scaffold	SC	SAMEA3893596	GCA_900179895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/895/GCA_900179895.1_19789_6_79	-	VREN1809
Campylobacter coli	195	PRJNA353352	353352	Proteobacteria	delta/epsilon subdivisions	1.8606	31.2	-	MPIV01	46	1926	1761	3/6/17	3/8/17	Contig	Uppsala University	SAMN06014566	GCA_002020085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/020/085/GCA_002020085.1_ASM202008v1	-	VA37
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16495	64.1	-	FSBM01	21	5243	5119	12/14/16	3/21/17	Scaffold	SC	SAMEA2275834	GCA_900132295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/295/GCA_900132295.1_12163_2_73	-	1108
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96569	64.2	-	FSBN01	17	4904	4767	12/14/16	3/21/17	Scaffold	SC	SAMEA2068808	GCA_900132315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/315/GCA_900132315.1_10665_4_63	-	318
Campylobacter coli	195	PRJDB5560	376730	Proteobacteria	delta/epsilon subdivisions	1.70474	31.3	-	BDRY01	34	1784	1667	4/28/17	5/6/17	Contig	"Division of Biomedical Food Research, NIHS"	SAMD00078612	GCA_002118015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/118/015/GCA_002118015.1_Ccoli_1.0	-	CAM962
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.20076	37.4	-	FXJZ01	208	3336	3098	4/26/17	5/6/17	Scaffold	SC	SAMEA3893593	GCA_900179905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/905/GCA_900179905.1_19789_6_77	-	VREN1807
Vibrio parahaemolyticus	670	PRJNA233509	233509	Proteobacteria	Gammaproteobacteria	5.13377	45.3	-	LFUO01	23	4910	4644	8/19/15	3/26/17	Scaffold	Omics Solutions	SAMN02781336	GCA_001270895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/895/GCA_001270895.1_ASM127089v1	-	PMC14.7
Klebsiella pneumoniae 303K	1381121	PRJNA214029	214029	Proteobacteria	Gammaproteobacteria	5.65029	57.2	-	AVAN01	52	5687	5320	10/17/13	2/21/17	Contig	National Health Research Institutes	SAMN02470628	GCA_000474635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/635/GCA_000474635.1_Kp303K1.0	24356835	303K
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.22198	28.6	-	CZXH01	959	3872	3704	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664013	GCA_900015565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/565/GCA_900015565.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.02105	47.2	-	CWPX01	62	3529	3477	7/17/15	7/17/15	Scaffold	SC	SAMEA889309	GCA_001256675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/675/GCA_001256675.1_4056_7_9	-	A241
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.63196	50.8	-	LXUQ01	433	5042	4407	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440993	GCA_001688195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/195/GCA_001688195.1_ASM168819v1	28028547	CDPH_C124
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.12333	41.1	-	CDWM01	65	2142	2023	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233821	GCA_000877215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/215/GCA_000877215.1_Velvet_assembly	-	E21R
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.20321	35.4	-	FJRY01	141	2237	2129	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888214	GCA_900074055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/055/GCA_900074055.1_VSA22	-	-
Acinetobacter baumannii 25569_2	1311109	PRJNA195213	195213	Proteobacteria	Gammaproteobacteria	4.00554	39.1	-	JHPD01	73	3885	3623	3/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646227	GCA_000611225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/225/GCA_000611225.1_ASM61122v1	-	25569_2
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.09396	65.8	-	CVVM01	202	6850	6578	6/23/15	3/18/17	Contig	PHE	SAMEA3374655	GCA_001181725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/725/GCA_001181725.1_E11_London_26_VIM_2_06_13	-	E11_London_26_VIM_2_06_13
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12012	51.7	-	FEUE01	95	2498	2164	2/9/16	3/19/17	Scaffold	SC	SAMEA2673843	GCA_900034585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/585/GCA_900034585.1_14355_6_28	-	2842STDY5881177
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.13459	39.4	-	CKCO01	45	2339	2118	3/21/15	3/10/17	Contig	SC	SAMEA1023727	GCA_001113565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/565/GCA_001113565.1_6593_4_5	-	24A
Escherichia coli KTE147	1182726	PRJNA164995	164995	Proteobacteria	Gammaproteobacteria	5.01538	50.6	-	ANWN01	3	5068	4806	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854678	GCA_000352705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/705/GCA_000352705.1_Esch_coli_KTE147_V1	-	KTE147
Mycobacterium tuberculosis TKK-01-0050	1324260	PRJNA198145	198145	Terrabacteria group	Actinobacteria	4.42718	65.6	-	JLXX01	14	4300	4127	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053783	GCA_000661065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/065/GCA_000661065.1_Myco_tube_TKK-01-0050_V1	-	TKK-01-0050
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.09643	37.9	-	MDMH01	35	3158	3078	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410737	GCA_001709605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/605/GCA_001709605.1_ASM170960v1	-	Lm235
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.76156	30.4	-	MOVW01	49	1887	1758	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04442366	GCA_001878105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/105/GCA_001878105.1_ASM187810v1	-	CDPHFDLB-F12M00559-a1
Salmonella enterica subsp. enterica serovar Enteritidis str. 81-2625	1079475	PRJNA72649	72649	Proteobacteria	Gammaproteobacteria	4.69548	52.1	-	ALIB01	110	4857	4527	12/31/12	5/19/17	Contig	FDA	SAMN01041147	GCA_000330465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/465/GCA_000330465.1_ASM33046v1	23383127	81-2625
Staphylococcus aureus HBHO6002	1409490	PRJNA223810	223810	Terrabacteria group	Firmicutes	2.8815	32.7	-	JBQX01	11	3034	2870	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381551	GCA_000539895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/895/GCA_000539895.1_Stap_aure_HBHO6002_V1	-	HBHO6002
Staphylococcus aureus AMMC6012	1409493	PRJNA223813	223813	Terrabacteria group	Firmicutes	2.88897	32.9	-	JBQU01	30	3044	2865	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381554	GCA_000539915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/915/GCA_000539915.1_Stap_aure_AMMC6012_V1	-	AMMC6012
Salmonella enterica subsp. enterica serovar Enteritidis str. 62-1976	1079476	PRJNA72651	72651	Proteobacteria	Gammaproteobacteria	4.69371	52.1	-	ALIC01	57	4823	4560	12/31/12	5/19/17	Contig	FDA	SAMN01041113	GCA_000330565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/565/GCA_000330565.1_ASM33056v1	23383127	62-1976
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.76012	30.4	-	MOVV01	22	1872	1757	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04442367	GCA_001878125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/125/GCA_001878125.1_ASM187812v1	-	CDPHFDLB-F12M00559-a2
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.96172	37.9	-	MDMJ01	15	3018	2932	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410726	GCA_001709625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/625/GCA_001709625.1_ASM170962v1	-	Lm231
Mycobacterium tuberculosis TKK-01-0052	1324262	PRJNA198147	198147	Terrabacteria group	Actinobacteria	4.39887	65.6	-	JLXV01	2	4273	4105	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053785	GCA_000661105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/105/GCA_000661105.1_Myco_tube_TKK-01-0052_V1	-	TKK-01-0052
Escherichia coli KTE154	1182728	PRJNA164999	164999	Proteobacteria	Gammaproteobacteria	4.9532	50.8	-	ANWO01	3	4991	4692	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854680	GCA_000352725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/725/GCA_000352725.1_Esch_coli_KTE154_V1	-	KTE154
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.13647	39.4	-	CKPH01	46	2348	2098	3/21/15	3/11/17	Contig	SC	SAMEA1024970	GCA_001113625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/625/GCA_001113625.1_6680_4_3	-	19F
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12303	51.8	-	FEUI01	89	2477	2157	2/9/16	3/19/17	Scaffold	SC	SAMEA2673867	GCA_900034595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/595/GCA_900034595.1_14355_6_38	-	2842STDY5881187
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.13614	65.8	-	CVUX01	250	6888	6615	6/24/15	3/18/17	Contig	PHE	SAMEA3374656	GCA_001181745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/745/GCA_001181745.1_E12_London_26_VIM_2_06_13	-	E12_London_26_VIM_2_06_13
Acinetobacter baumannii 25569_4	1311111	PRJNA195221	195221	Proteobacteria	Gammaproteobacteria	3.9708	39.1	-	JHPC01	69	3845	3588	3/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646229	GCA_000611245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/245/GCA_000611245.1_ASM61124v1	-	25569_4
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.1862	35.4	-	FJSA01	165	2212	2066	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888215	GCA_900074065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/065/GCA_900074065.1_VSA26	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.08881	41.2	-	CDVZ01	49	2095	1997	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233795	GCA_000877235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/235/GCA_000877235.1_Velvet_assembly	-	B42S
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.40197	50.9	-	LXUL01	414	4703	4175	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440998	GCA_001688235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/235/GCA_001688235.1_ASM168823v1	28028547	CDPH_C130
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.21333	48	-	CWPL01	1306	5568	5557	7/16/15	7/16/15	Scaffold	SC	SAMEA889314	GCA_001256695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/695/GCA_001256695.1_2956_6_7	-	4660
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.11652	28.6	-	CZWU01	369	3749	3644	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664011	GCA_900015575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/575/GCA_900015575.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae BIDMC 18C	1328414	PRJNA202025	202025	Proteobacteria	Gammaproteobacteria	5.73807	57.1	-	AXLE01	6	5870	5594	10/18/13	2/21/17	Contig	Broad Institute	SAMN02138644	GCA_000474865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/865/GCA_000474865.1_Kleb_pneu_BIDMC_18C_V1_PacBio	-	BIDMC 18C
Vibrio parahaemolyticus	670	PRJNA233509	233509	Proteobacteria	Gammaproteobacteria	5.13829	45.3	-	LFUP01	13	4913	4674	8/19/15	3/26/17	Scaffold	Omics Solutions	SAMN02781337	GCA_001270905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/905/GCA_001270905.1_ASM127090v1	-	PMC48
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.89843	37.7	-	FXJE01	150	2962	2776	4/26/17	5/6/17	Scaffold	SC	SAMEA3893684	GCA_900179915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/915/GCA_900179915.1_19789_7_11	-	VREN3734
Campylobacter coli	195	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.64573	31.4	-	NFPJ01	52	1695	1612	6/8/17	6/10/17	Contig	Swansea University	SAMN06888286	GCA_002178515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/515/GCA_002178515.1_ASM217851v1	28493321	isolate_H13
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.27065	64.1	-	FVEU01	29	5348	5164	3/10/17	3/18/17	Scaffold	SC	SAMEA2070666	GCA_900132325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/325/GCA_900132325.1_10665_4_65	-	320
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.55097	63.8	-	FSBU01	229	5635	5295	12/14/16	3/21/17	Scaffold	SC	SAMEA2259621	GCA_900132485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/485/GCA_900132485.1_11861_7_81	-	816
Campylobacter coli	195	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.69102	31.4	-	NFPY01	217	1757	1644	6/8/17	6/10/17	Contig	Swansea University	SAMN06888271	GCA_002178715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/715/GCA_002178715.1_ASM217871v1	28493321	isolate_C15
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.98385	37.7	-	FXJD01	161	3116	2837	4/26/17	5/6/17	Scaffold	SC	SAMEA3893492	GCA_900179925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/925/GCA_900179925.1_19789_6_96	-	VREN1871
Vibrio parahaemolyticus	670	PRJNA233509	233509	Proteobacteria	Gammaproteobacteria	5.14939	45.4	-	LFUR01	17	4942	4316	8/19/15	3/26/17	Scaffold	Omics Solutions	SAMN02781340	GCA_001270945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/945/GCA_001270945.1_ASM127094v1	-	RIMD 2210633
Klebsiella pneumoniae BIDMC 12C	1328408	PRJNA202016	202016	Proteobacteria	Gammaproteobacteria	5.79456	57.1	-	AXLG01	5	5956	5680	10/18/13	2/21/17	Contig	Broad Institute	SAMN02138635	GCA_000474885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/885/GCA_000474885.1_Kleb_pneu_BIDMC_12C_V1_PacBio	-	BIDMC 12C
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.13226	28.6	-	CZXW01	377	3765	3642	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664032	GCA_900015585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/585/GCA_900015585.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.00722	47.1	-	CWPP01	90	3504	3469	7/16/15	7/16/15	Scaffold	SC	SAMEA889278	GCA_001256835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/835/GCA_001256835.1_4056_7_12	-	A231
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.68312	50.9	-	LYEV01	526	5273	4460	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440940	GCA_001688265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/265/GCA_001688265.1_ASM168826v1	28028547	CDPH_C16
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03933	41.2	-	CDUB01	58	2028	1927	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233817	GCA_000936535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/535/GCA_000936535.1_Velvet_assembly	-	E11O
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.11728	35.5	-	FJRZ01	129	2128	2030	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888216	GCA_900074075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/075/GCA_900074075.1_VSA29	-	-
Acinetobacter baumannii 26016_4	1311071	PRJNA195152	195152	Proteobacteria	Gammaproteobacteria	4.17548	39.2	-	JHPB01	140	4196	3902	3/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646236	GCA_000611265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/265/GCA_000611265.1_ASM61126v1	-	26016_4
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.15895	65.8	-	CVVQ01	230	6902	6623	6/23/15	3/18/17	Contig	PHE	SAMEA3374657	GCA_001181765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/765/GCA_001181765.1_E13_London_26_VIM_2_06_13	-	E13_London_26_VIM_2_06_13
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.20086	51.6	-	FEYH01	102	2560	2176	2/9/16	3/21/17	Scaffold	SC	SAMEA2674475	GCA_900034605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/605/GCA_900034605.1_14355_8_20	-	2842STDY5881745
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06415	39.6	-	CNUF02	133	2247	2036	3/23/15	3/5/17	Contig	SC	SAMEA1032681	GCA_001113705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/705/GCA_001113705.2_6999_6_10	-	276430
Escherichia coli KTE158	1182731	PRJNA165005	165005	Proteobacteria	Gammaproteobacteria	5.01166	50.7	-	ANWP01	5	5056	4815	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854683	GCA_000352745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/745/GCA_000352745.1_Esch_coli_KTE158_V1	-	KTE158
Mycobacterium tuberculosis TKK-01-0053	1324263	PRJNA198148	198148	Terrabacteria group	Actinobacteria	4.39428	65.6	-	JLXU01	7	4268	4096	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053786	GCA_000661125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/125/GCA_000661125.1_Myco_tube_TKK-01-0053_V1	-	TKK-01-0053
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.02549	37.8	-	MDME01	24	3088	3012	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410650	GCA_001709635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/635/GCA_001709635.1_ASM170963v1	-	Lm101
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.65759	30.4	-	MOVU01	26	1741	1643	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04442368	GCA_001878155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/155/GCA_001878155.1_ASM187815v1	-	CDPHFDLB-F12M00560-a1
Salmonella enterica subsp. enterica serovar Enteritidis str. 53-407	1116477	PRJNA77693	77693	Proteobacteria	Gammaproteobacteria	4.65885	52.1	-	ALID01	62	4774	4516	12/31/12	5/19/17	Contig	FDA	SAMN01041096	GCA_000330585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/585/GCA_000330585.1_ASM33058v1	23383127	53-407
Staphylococcus aureus LPIH6001	1409494	PRJNA223814	223814	Terrabacteria group	Firmicutes	2.90165	32.7	-	JBQT01	12	3058	2894	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381555	GCA_000539935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/935/GCA_000539935.1_Stap_aure_LPIH6001_V1	-	LPIH6001
Staphylococcus aureus MISS6048	1409495	PRJNA223815	223815	Terrabacteria group	Firmicutes	2.84219	32.8	-	JBQS01	19	2932	2792	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381556	GCA_000539955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/955/GCA_000539955.1_Stap_aure_MISS6048_V1	-	MISS6048
Salmonella enterica subsp. enterica serovar Agona str. SH08SF124	1262652	PRJNA182122	182122	Proteobacteria	Gammaproteobacteria	4.88905	52	-	ANOT01	62	5022	4728	1/2/13	2/26/17	Contig	"University of Maryland, College Park"	SAMN02415259	GCA_000330625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/625/GCA_000330625.1_ASM33062v1	23469342	SH08SF124
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.65209	30.5	-	MOVT01	44	1747	1633	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04442369	GCA_001878175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/175/GCA_001878175.1_ASM187817v1	-	CDPHFDLB-F12M00560-a2
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.02317	37.9	-	MDMN01	29	3085	3006	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410708	GCA_001709645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/645/GCA_001709645.1_ASM170964v1	-	Lm218
Mycobacterium tuberculosis TKK-01-0054	1324264	PRJNA198149	198149	Terrabacteria group	Actinobacteria	4.41558	65.6	-	JLXT01	2	4267	4117	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053787	GCA_000661145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/145/GCA_000661145.1_Myco_tube_TKK-01-0054_V1	-	TKK-01-0054
Escherichia coli KTE165	1182735	PRJNA165013	165013	Proteobacteria	Gammaproteobacteria	4.75784	50.6	-	ANWQ01	3	4764	4519	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00854687	GCA_000352765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/765/GCA_000352765.1_Esch_coli_KTE165_V1	-	KTE165
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09632	39.5	-	CLUS01	72	2305	2098	3/21/15	3/11/17	Contig	SC	SAMEA1026253	GCA_001113745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/745/GCA_001113745.1_6983_2_23	-	SMRU2231
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.1548	51.6	-	FFAB01	94	2509	2135	2/9/16	3/21/17	Scaffold	SC	SAMEA2674230	GCA_900034615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/615/GCA_900034615.1_14555_5_45	-	2842STDY5881386
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.09398	65.8	-	CWGG01	194	6827	6578	6/23/15	3/18/17	Contig	PHE	SAMEA3374658	GCA_001181785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/785/GCA_001181785.1_E14_London_26_VIM_2_06_13	-	E14_London_26_VIM_2_06_13
Acinetobacter baumannii 45052_3	1311143	PRJNA195268	195268	Proteobacteria	Gammaproteobacteria	4.00095	39	-	JHPA01	69	3850	3579	3/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02649527	GCA_000611285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/285/GCA_000611285.1_ASM61128v1	-	45052_3
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.09641	35.4	-	FJSB01	144	2138	2023	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888210	GCA_900074085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/085/GCA_900074085.1_VSA3	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.06451	41.1	-	CEAS01	55	2055	1955	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234105	GCA_000936555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/555/GCA_000936555.1_Velvet_assembly	-	V30G
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.50265	50.9	-	LYEU01	549	4891	4253	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440943	GCA_001688275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/275/GCA_001688275.1_ASM168827v1	28028547	CDPH_C19
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.03166	46.9	-	CWPO01	120	3922	3902	7/16/15	7/16/15	Scaffold	SC	SAMEA889367	GCA_001256975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/975/GCA_001256975.1_4056_7_10	-	A232
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.29615	29.1	-	CZYP01	1516	3940	3670	3/31/16	3/20/17	Contig	UNIVERSITE LAVAL	SAMEA3664046	GCA_900015595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/595/GCA_900015595.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae BIDMC 16	1328411	PRJNA202020	202020	Proteobacteria	Gammaproteobacteria	5.75137	57.1	-	AXLF01	6	5878	5575	10/18/13	2/21/17	Contig	Broad Institute	SAMN02138639	GCA_000474905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/905/GCA_000474905.1_Kleb_pneu_BIDMC_16_V1_PacBio	-	BIDMC 16
Vibrio parahaemolyticus	670	PRJNA233509	233509	Proteobacteria	Gammaproteobacteria	5.14513	45.3	-	LFUQ01	19	4937	4674	8/19/15	3/26/17	Scaffold	Omics Solutions	SAMN02781334	GCA_001270975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/975/GCA_001270975.1_ASM127097v1	-	ATC220
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.04351	37.6	-	FXIW01	167	3164	2909	4/26/17	5/6/17	Scaffold	SC	SAMEA3893763	GCA_900179935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/935/GCA_900179935.1_19789_7_111	-	VREN3281
Campylobacter coli	195	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.65326	31.4	-	NFQH01	80	1709	1626	6/8/17	6/10/17	Contig	Swansea University	SAMN06888262	GCA_002178855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/855/GCA_002178855.1_ASM217885v1	28493321	isolate_5
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.8057	64.2	-	FVFN01	15	4787	4640	3/10/17	3/18/17	Scaffold	SC	SAMEA2259595	GCA_900132495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/495/GCA_900132495.1_11861_7_55	-	790
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.86812	64.1	-	FSBT01	12	4819	4678	12/14/16	3/21/17	Scaffold	SC	SAMEA2259569	GCA_900132515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/515/GCA_900132515.1_11861_7_33	-	764
Campylobacter coli	195	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.64506	31.4	-	NFQI01	125	1693	1614	6/8/17	6/10/17	Contig	Swansea University	SAMN06888261	GCA_002178865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/865/GCA_002178865.1_ASM217886v1	28493321	isolate_4
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.19455	37.4	-	FXJF01	208	3342	3098	4/26/17	5/6/17	Scaffold	SC	SAMEA3893606	GCA_900179945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/945/GCA_900179945.1_19789_6_85	-	VREN1815
Vibrio parahaemolyticus	670	PRJNA285022	285022	Proteobacteria	Gammaproteobacteria	5.09055	45.3	-	LQGU01	74	4881	4675	1/5/16	3/19/17	Scaffold	RAJIV GANDHI CENTRE FOR BIOTECHNOLOGY	SAMN03735013	GCA_001497485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/497/485/GCA_001497485.1_ASM149748v1	27081143	K23
Klebsiella pneumoniae LAU-KP1	1389422	PRJNA215775	215775	Proteobacteria	Gammaproteobacteria	5.62714	57.1	-	AYQE01	85	5705	5415	11/25/13	2/21/17	Contig	Lebanese American University	SAMN02470232	GCA_000498775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/775/GCA_000498775.2_LAU-EC1	24558251	LAU-KP1
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.22604	28.9	-	FACH01	632	3886	3739	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664144	GCA_900015605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/605/GCA_900015605.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.18346	46.8	-	CWQY01	269	4461	4441	7/16/15	7/16/15	Scaffold	SC	SAMEA889219	GCA_001258975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/975/GCA_001258975.1_4056_8_8	-	A316
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.62109	50.8	-	LYEN01	485	5206	4288	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440960	GCA_001688305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/305/GCA_001688305.1_ASM168830v1	28028547	CDPH_C36
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04913	41.2	-	CDYA01	57	2039	1951	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234069	GCA_000936595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/595/GCA_000936595.1_Velvet_assembly	-	S8U
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.15536	35.5	-	FJSC01	130	2184	2087	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888217	GCA_900074095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/095/GCA_900074095.1_VSA36	-	-
Acinetobacter baumannii 45052_5	1311145	PRJNA195270	195270	Proteobacteria	Gammaproteobacteria	3.96008	39.1	-	JHOZ01	141	3796	3520	3/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02649529	GCA_000611305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/305/GCA_000611305.1_ASM61130v1	-	45052_5
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.11155	65.8	-	CVXC01	225	6867	6588	6/23/15	3/18/17	Contig	PHE	SAMEA3374659	GCA_001181805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/805/GCA_001181805.1_P56_London_12_VIM_2_07_13	-	P56_London_12_VIM_2_07_13
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15398	51.8	-	FFCP01	107	2489	2113	2/9/16	3/21/17	Scaffold	SC	SAMEA2674170	GCA_900034625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/625/GCA_900034625.1_14555_6_17	-	2842STDY5881454
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04916	39.6	-	CNYS02	142	2230	2012	3/22/15	3/11/17	Contig	SC	SAMEA1463274	GCA_001113785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/785/GCA_001113785.2_7553_4_42	-	NP7057
Escherichia coli KTE192	1181738	PRJNA163397	163397	Proteobacteria	Gammaproteobacteria	4.77459	50.5	-	ANWR01	5	4824	4570	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974047	GCA_000352785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/785/GCA_000352785.1_Esch_coli_KTE192_V1	-	KTE192
Mycobacterium tuberculosis TKK-01-0055	1324265	PRJNA198150	198150	Terrabacteria group	Actinobacteria	4.42059	65.4	-	JLXS01	7	4288	4092	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053788	GCA_000661165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/165/GCA_000661165.1_Myco_tube_TKK-01-0055_V1	-	TKK-01-0055
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.02709	37.8	-	MDMF01	22	3089	2997	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410568	GCA_001709685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/685/GCA_001709685.1_ASM170968v1	-	Lm10
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.63943	30.4	-	MOVS01	32	1706	1595	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04531984	GCA_001878185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/185/GCA_001878185.1_ASM187818v1	-	CDPHFDLB-F12M00562-b7a1
Salmonella enterica subsp. enterica serovar Agona str. SH10GFN094	1262654	PRJNA182123	182123	Proteobacteria	Gammaproteobacteria	4.81128	52	-	ANOU01	66	4916	4622	1/2/13	5/19/17	Contig	"University of Maryland, College Park"	SAMN02415260	GCA_000330645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/645/GCA_000330645.1_ASM33064v1	23469342	SH10GFN094
Staphylococcus aureus MISS6042	1409496	PRJNA223816	223816	Terrabacteria group	Firmicutes	2.8699	32.8	-	JBQR01	20	2980	2846	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381557	GCA_000539975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/975/GCA_000539975.1_Stap_aure_MISS6042_V1	-	MISS6042
Staphylococcus aureus SJOS6022	1409497	PRJNA223817	223817	Terrabacteria group	Firmicutes	2.84526	32.8	-	JBQQ01	29	2972	2806	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381558	GCA_000539995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/539/995/GCA_000539995.1_Stap_aure_SJOS6022_V1	-	SJOS6022
Salmonella enterica subsp. enterica serovar Agona str. SH11G1113	1263410	PRJNA181255	181255	Proteobacteria	Gammaproteobacteria	4.8562	52	-	ANOS01	78	4947	4659	1/2/13	2/26/17	Contig	"University of Maryland, College Park"	SAMN02415258	GCA_000330665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/665/GCA_000330665.1_ASM33066v1	23469342	SH11G1113
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.63656	30.5	-	MPBL01	58	1712	1590	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04531983	GCA_001878205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/205/GCA_001878205.1_ASM187820v1	-	CDPHFDLB-F12M00562-b7b1
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.06876	37.9	-	MDMM01	25	3111	3026	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410709	GCA_001709705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/705/GCA_001709705.1_ASM170970v1	-	Lm219
Mycobacterium tuberculosis TKK-01-0056	1324266	PRJNA198151	198151	Terrabacteria group	Actinobacteria	4.40048	65.5	-	JLXR01	12	4288	4094	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053789	GCA_000661185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/185/GCA_000661185.1_Myco_tube_TKK-01-0056_V1	-	TKK-01-0056
Escherichia coli KTE194	1181740	PRJNA163401	163401	Proteobacteria	Gammaproteobacteria	5.15605	50.4	-	ANWS01	9	5238	4897	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974049	GCA_000352805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/805/GCA_000352805.1_Esch_coli_KTE194_V1	-	KTE194
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11006	39.5	-	CKNZ01	41	2324	2101	3/21/15	3/11/17	Contig	SC	SAMEA1024157	GCA_001113805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/805/GCA_001113805.1_6673_8_13	-	SMRU253
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15412	51.6	-	FFDT01	60	2497	2154	2/9/16	3/19/17	Scaffold	SC	SAMEA2674247	GCA_900034635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/635/GCA_900034635.1_14555_6_47	-	2842STDY5881484
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	6.87735	66	-	CVXH01	207	6622	6356	6/23/15	3/18/17	Contig	PHE	SAMEA3374660	GCA_001181825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/825/GCA_001181825.1_P8_2_London_17_VIM_2_07_13	-	P8_2_London_17_VIM_2_07_13
Acinetobacter baumannii 26016_1	1311068	PRJNA195149	195149	Proteobacteria	Gammaproteobacteria	4.15699	39.2	-	JHOY01	118	4174	3888	3/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646235	GCA_000611325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/325/GCA_000611325.1_ASM61132v1	-	26016_1
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.1672	35.5	-	FJSD01	157	2209	2092	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888218	GCA_900074105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/105/GCA_900074105.1_VSA44	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.07828	41.1	-	CEBD01	109	2057	1954	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234113	GCA_000936835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/835/GCA_000936835.1_Velvet_assembly	-	V34P
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.76556	50.7	-	LYEK01	483	5458	4440	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440963	GCA_001688325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/325/GCA_001688325.1_ASM168832v1	28028547	CDPH_C39
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.99255	46.9	-	CWQF01	128	3634	3602	7/16/15	7/16/15	Scaffold	SC	SAMEA889215	GCA_001259575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/575/GCA_001259575.1_4056_8_4	-	A390
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.55046	29.3	-	FADT01	1855	4245	3928	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664184	GCA_900015615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/615/GCA_900015615.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae subsp. pneumoniae KpQ15	1395575	PRJNA217858	217858	Proteobacteria	Gammaproteobacteria	5.37646	57.4	-	AWOM01	84	5440	5193	11/26/13	2/21/17	Contig	Oh no sequences! Era7 Bioinformatics R&D group	SAMN02469895	GCA_000499865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/865/GCA_000499865.1_KpQ15	24155060	KpQ15
Vibrio parahaemolyticus	670	PRJNA306401	306401	Proteobacteria	Gammaproteobacteria	5.15804	45.3	-	LPZS01	65	4993	4763	1/26/16	3/19/17	Scaffold	Giangxi Center for Disease Prevention and Control	SAMN04349747	GCA_001541615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/615/GCA_001541615.1_ASM154161v1	-	Gxw_7004
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.14215	37.5	-	FXJR01	208	3270	3024	4/26/17	5/6/17	Scaffold	SC	SAMEA3893603	GCA_900179965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/965/GCA_900179965.1_19789_6_83	-	VREN1813
Campylobacter coli	195	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.65388	31.4	-	NFQJ01	72	1711	1628	6/8/17	6/10/17	Contig	Swansea University	SAMN06888260	GCA_002178875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/875/GCA_002178875.1_ASM217887v1	28493321	isolate_3
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.93021	64.1	-	FSBV01	25	4945	4768	12/14/16	3/21/17	Scaffold	SC	SAMEA2259622	GCA_900132525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/525/GCA_900132525.1_11861_7_82	-	817
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.91974	64.1	-	FVFM01	29	4912	4723	3/10/17	3/18/17	Scaffold	SC	SAMEA2259672	GCA_900132535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/535/GCA_900132535.1_11861_8_19	-	867
Campylobacter coli IPSID-1	1437818	PRJEB5125	232563	Proteobacteria	delta/epsilon subdivisions	1.68338	31.4	-	CBXC01	38	1771	1653	2/2/14	3/15/17	Scaffold	IP	SAMEA3138911	GCA_000531565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/565/GCA_000531565.1_IPSID-1	24625865	IPSID-1
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.13192	37.5	-	FXJT01	142	3227	3000	4/26/17	5/6/17	Scaffold	SC	SAMEA3893496	GCA_900179975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/975/GCA_900179975.1_19789_6_98	-	VREN1873
Vibrio parahaemolyticus	670	PRJNA306404	306404	Proteobacteria	Gammaproteobacteria	5.13926	45.1	-	LPZT01	57	4969	4744	1/26/16	3/19/17	Scaffold	Giangxi Center for Disease Prevention and Control	SAMN04349756	GCA_001541625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/625/GCA_001541625.1_ASM154162v1	-	Gxw_9143
Klebsiella pneumoniae subsp. pneumoniae KpQ24	1395574	PRJNA217857	217857	Proteobacteria	Gammaproteobacteria	5.3924	57.4	-	AWON01	148	5474	5147	11/26/13	2/21/17	Contig	Oh no sequences! Era7 Bioinformatics R&D group	SAMN02469894	GCA_000499885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/885/GCA_000499885.1_KpQ24	24155060	KpQ24
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.22227	29	-	FADU01	1191	3846	3628	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664185	GCA_900015625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/625/GCA_900015625.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.09422	46.8	-	CWQH01	116	3746	3703	7/17/15	7/17/15	Scaffold	SC	SAMEA889216	GCA_001259795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/795/GCA_001259795.1_4056_8_5	-	A389
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.72355	50.6	-	LYEH01	560	5383	4289	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440966	GCA_001688335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/335/GCA_001688335.1_ASM168833v1	28028547	CDPH_C42
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05398	41.2	-	CDXF01	96	2028	1929	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234035	GCA_000936875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/875/GCA_000936875.1_Velvet_assembly	-	S1M
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.16119	35.5	-	FJSE01	120	2189	2089	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888211	GCA_900074115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/115/GCA_900074115.1_VSA6	-	-
Acinetobacter baumannii 26016_6	1311073	PRJNA195154	195154	Proteobacteria	Gammaproteobacteria	4.14586	39.1	-	JHOX01	128	4152	3862	3/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646369	GCA_000611345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/345/GCA_000611345.1_ASM61134v1	-	26016_6
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.08743	65.8	-	CVWZ01	195	6824	6549	6/24/15	3/18/17	Contig	PHE	SAMEA3374661	GCA_001181845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/845/GCA_001181845.1_P57_South_East_3_VIM_2_09_13	-	P57_South_East_3_VIM_2_09_13
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11916	51.7	-	FETR01	94	2492	2154	2/9/16	3/19/17	Scaffold	SC	SAMEA2674044	GCA_900035125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/125/GCA_900035125.1_14355_5_91	-	2842STDY5881144
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.04373	39.7	-	CLWH01	64	2255	2044	3/21/15	3/11/17	Contig	SC	SAMEA1025924	GCA_001113825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/825/GCA_001113825.1_6983_4_83	-	SMRU2291
Escherichia coli KTE190	1181736	PRJNA163393	163393	Proteobacteria	Gammaproteobacteria	5.13213	50.5	-	ANWT01	5	5173	4900	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974045	GCA_000352825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/825/GCA_000352825.1_Esch_coli_KTE190_V1	-	KTE190
Mycobacterium tuberculosis TKK-01-0057	1324267	PRJNA198152	198152	Terrabacteria group	Actinobacteria	4.44353	65.4	-	JLXQ01	6	4302	4114	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053790	GCA_000661205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/205/GCA_000661205.1_Myco_tube_TKK-01-0057_V1	-	TKK-01-0057
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.10969	37.7	-	MDMG01	42	3195	3098	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410738	GCA_001709715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/715/GCA_001709715.1_ASM170971v1	-	Lm236
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.69825	30.4	-	MOVR01	38	1814	1699	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04531985	GCA_001878235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/235/GCA_001878235.1_ASM187823v1	-	CDPHFDLB-F12M00562-b9b1a
Salmonella enterica subsp. enterica serovar Rissen str. 150	687914	PRJNA41461	41461	Proteobacteria	Gammaproteobacteria	4.89425	52.1	-	AHUI01	95	4996	4687	2/1/13	5/19/17	Contig	FDA	SAMN00811267	GCA_000335835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/835/GCA_000335835.1_ASM33583v1	-	150
Staphylococcus aureus SJOS6027	1409498	PRJNA223818	223818	Terrabacteria group	Firmicutes	2.84043	32.8	-	JBQP01	36	2985	2810	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381559	GCA_000540015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/015/GCA_000540015.1_Stap_aure_SJOS6027_V1	-	SJOS6027
Staphylococcus aureus OCMM6004	1409499	PRJNA223819	223819	Terrabacteria group	Firmicutes	2.93197	32.9	-	JBQO01	34	3101	2915	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381560	GCA_000540035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/035/GCA_000540035.1_Stap_aure_OCMM6004_V1	-	OCMM6004
Salmonella enterica subsp. enterica serovar Enteritidis str. SE10	696865	PRJNA41919	41919	Proteobacteria	Gammaproteobacteria	4.68984	52.1	-	AHUN01	168	4855	4500	2/1/13	5/19/17	Contig	FDA	SAMN01041177	GCA_000335855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/855/GCA_000335855.1_ASM33585v1	23383127	SE10
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.7604	30.4	-	MOVQ01	24	1872	1761	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04531988	GCA_001878255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/255/GCA_001878255.1_ASM187825v1	-	CDPHFDLB-F12M00565-1
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.07335	37.8	-	MDML01	27	3119	3031	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410722	GCA_001709725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/725/GCA_001709725.1_ASM170972v1	-	Lm228
Mycobacterium tuberculosis TKK-01-0058	1324268	PRJNA198153	198153	Terrabacteria group	Actinobacteria	4.4321	65.5	-	JLXP01	2	4309	4140	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053791	GCA_000661225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/225/GCA_000661225.1_Myco_tube_TKK-01-0058_V1	-	TKK-01-0058
Escherichia coli KTE173	1181724	PRJNA163369	163369	Proteobacteria	Gammaproteobacteria	5.22233	50.6	-	ANWU01	5	5390	5025	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974033	GCA_000352845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/845/GCA_000352845.1_Esch_coli_KTE173_V1	-	KTE173
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.04306	39.6	-	CKWL01	52	2259	2060	3/21/15	3/11/17	Contig	SC	SAMEA1025994	GCA_001113905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/905/GCA_001113905.1_6823_5_19	-	SMRU1963
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12601	51.7	-	FEXG01	76	2484	2140	2/9/16	3/21/17	Scaffold	SC	SAMEA2674379	GCA_900035135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/135/GCA_900035135.1_14324_5_42	-	2842STDY5881575
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.01178	65.8	-	CVXA01	195	6785	6528	6/24/15	3/18/17	Contig	PHE	SAMEA3374662	GCA_001181865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/865/GCA_001181865.1_P58_London_29_09_13	-	P58_London_29_09_13
Acinetobacter baumannii 25569_3	1311110	PRJNA195217	195217	Proteobacteria	Gammaproteobacteria	3.99347	39	-	JHOW01	73	3874	3632	3/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646228	GCA_000611365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/365/GCA_000611365.1_ASM61136v1	-	25569_3
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.16764	35.5	-	FJSH01	156	2208	2093	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888219	GCA_900074125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/125/GCA_900074125.1_VSA50	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.0599	41.1	-	CDVM01	60	2051	1959	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233868	GCA_000936895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/895/GCA_000936895.1_Velvet_assembly	-	F7M
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.62829	50.8	-	LYEE01	517	5293	4269	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440969	GCA_001688365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/365/GCA_001688365.1_ASM168836v1	28028547	CDPH_C45
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.98467	47.3	-	CWOE01	78	3483	3429	7/16/15	7/16/15	Scaffold	SC	SAMEA889311	GCA_001259915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/915/GCA_001259915.1_4056_6_3	-	A155
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.11324	28.7	-	FAGE01	634	3753	3627	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664247	GCA_900015645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/645/GCA_900015645.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae NB60	1431455	PRJNA230238	230238	Proteobacteria	Gammaproteobacteria	5.95998	56.8	-	AZAP01	315	5963	5679	2/6/14	2/21/17	Contig	Ningbo First Hospital	SAMN02952957	GCA_000565135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/135/GCA_000565135.1_Klebsiella_pneumoniae_Strain_NB60_whole-genome_sequencing	-	NB60
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.12685	45.2	-	LKQI01	52	4834	4645	4/28/16	3/20/17	Scaffold	FDA/CFSAN	SAMN04145923	GCA_001634015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/015/GCA_001634015.1_ASM163401v1	27315090	CFSAN025060
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.20215	37.4	-	FXJK01	209	3343	3099	4/26/17	5/6/17	Scaffold	SC	SAMEA3893478	GCA_900179985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/985/GCA_900179985.1_19789_6_91	-	VREN1842
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69991	31.3	-	CUQY01	20	1767	1659	3/31/15	3/18/17	Scaffold	SC	SAMEA1010647	GCA_001225145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/145/GCA_001225145.1_7092_1_57	-	OXC6504
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.78644	64.2	-	FSBW01	14	4745	4609	12/14/16	3/21/17	Scaffold	SC	SAMEA2259686	GCA_900132545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/545/GCA_900132545.1_11893_6_42	-	881
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.78544	64.2	-	FVFL01	11	4744	4614	3/10/17	3/18/17	Scaffold	SC	SAMEA2259685	GCA_900132555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/555/GCA_900132555.1_11893_6_41	-	880
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.68599	31.3	-	CUPR01	12	1750	1663	3/31/15	3/18/17	Scaffold	SC	SAMEA1010283	GCA_001228685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/685/GCA_001228685.1_7092_1_27	-	OXC6474
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.94253	37.9	-	FXJP01	144	3044	2846	4/26/17	5/6/17	Scaffold	SC	SAMEA3893667	GCA_900179995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/179/995/GCA_900179995.1_19789_7_3	-	VREN3649
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.1232	45.2	-	LKQD01	47	4839	4635	4/28/16	3/20/17	Scaffold	FDA/CFSAN	SAMN04145918	GCA_001634125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/125/GCA_001634125.1_ASM163412v1	27315090	CFSAN025055
Klebsiella pneumoniae BIDMC 35	1328424	PRJNA202047	202047	Proteobacteria	Gammaproteobacteria	5.39952	57.2	-	JCMW02	5	5473	5197	2/6/14	6/19/17	Contig	Broad Institute	SAMN02138666	GCA_000567225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/225/GCA_000567225.2_ASM56722v2	-	BIDMC 35
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.27947	28.9	-	FAKM01	982	3954	3766	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664357	GCA_900015665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/665/GCA_900015665.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.01831	47	-	CWPD01	147	4203	4166	7/16/15	7/16/15	Scaffold	SC	SAMEA889341	GCA_001259935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/935/GCA_001259935.1_4056_6_11	-	A109
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.6463	50.8	-	LXUU01	437	5140	4435	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440989	GCA_001688395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/395/GCA_001688395.1_ASM168839v1	28028547	CDPH_C118
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.08716	41.1	-	CDYV01	57	2092	1994	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234073	GCA_000936935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/935/GCA_000936935.1_Velvet_assembly	-	S8Y
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.13061	35.3	-	FJSL01	127	2171	2049	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888220	GCA_900074135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/135/GCA_900074135.1_VSA65	-	-
Acinetobacter baumannii 25569_7	1311114	PRJNA195233	195233	Proteobacteria	Gammaproteobacteria	4.0583	39.1	-	JHOV01	63	3918	3547	3/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646233	GCA_000611385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/385/GCA_000611385.1_ASM61138v1	-	25569_7
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.20432	65.6	-	CVXN01	309	7001	6688	6/24/15	3/18/17	Contig	PHE	SAMEA3374663	GCA_001181885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/885/GCA_001181885.1_P59_Wales_1_VIM_2_09_13	-	P59_Wales_1_VIM_2_09_13
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.20276	51.6	-	FEZA01	75	2567	2206	2/9/16	3/21/17	Scaffold	SC	SAMEA2674150	GCA_900035145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/145/GCA_900035145.1_14555_5_18	-	2842STDY5881359
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.09542	39.6	-	CLYV01	87	2347	2099	3/21/15	3/11/17	Contig	SC	SAMEA1028962	GCA_001114125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/125/GCA_001114125.1_6983_7_61	-	SMRU2365
Escherichia coli KTE175	1181725	PRJNA163371	163371	Proteobacteria	Gammaproteobacteria	5.24726	50.7	-	ANWV01	6	5429	5049	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00974034	GCA_000352865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/865/GCA_000352865.1_Esch_coli_KTE175_V1	-	KTE175
Mycobacterium tuberculosis TKK-01-0060	1324270	PRJNA198155	198155	Terrabacteria group	Actinobacteria	4.41708	65.5	-	JLXN01	3	4286	4118	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053793	GCA_000661245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/245/GCA_000661245.1_Myco_tube_TKK-01-0060_V1	-	TKK-01-0060
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.02792	37.8	-	MDLW01	17	3095	2998	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410576	GCA_001709765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/765/GCA_001709765.1_ASM170976v1	-	Lm22
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.69139	30.5	-	MOVP01	44	1788	1685	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN05163876	GCA_001878275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/275/GCA_001878275.1_ASM187827v1	-	CDPHFDLB-M00214
Salmonella enterica subsp. enterica serovar Enteritidis str. 13-1	696866	PRJNA41931	41931	Proteobacteria	Gammaproteobacteria	4.72716	52.1	-	AHUQ01	68	4859	4586	2/1/13	5/19/17	Contig	FDA	SAMN01041082	GCA_000335895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/895/GCA_000335895.1_ASM33589v1	23383127	13-1
Staphylococcus aureus UCIM6009	1409500	PRJNA223820	223820	Terrabacteria group	Firmicutes	2.89269	32.7	-	JBQN01	9	3048	2885	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381561	GCA_000540055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/055/GCA_000540055.1_Stap_aure_UCIM6009_V1	-	UCIM6009
Staphylococcus aureus KINW6001	1409501	PRJNA223821	223821	Terrabacteria group	Firmicutes	2.87511	32.8	-	JBQM01	29	3015	2840	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381562	GCA_000540075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/075/GCA_000540075.1_Stap_aure_KINW6001_V1	-	KINW6001
"Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1700"	866914	PRJNA50691	50691	Proteobacteria	Gammaproteobacteria	4.90051	52.1	-	AHUS01	71	5053	4809	2/1/13	5/19/17	Contig	FDA	SAMN00811526	GCA_000335915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/915/GCA_000335915.1_ASM33591v1	-	08-1700
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.69492	30.5	-	MOVO01	84	1824	1684	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN05163877	GCA_001878285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/285/GCA_001878285.1_ASM187828v1	-	CDPHFDLB-M00224
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.0153	37.8	-	MDLX01	26	3096	3006	8/23/16	3/1/17	Contig	University of British Columbia	SAMN05410574	GCA_001709785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/785/GCA_001709785.1_ASM170978v1	-	Lm20
Mycobacterium tuberculosis TKK-01-0061	1324271	PRJNA198156	198156	Terrabacteria group	Actinobacteria	4.41811	65.5	-	JLXM01	5	4299	4124	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053794	GCA_000661265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/265/GCA_000661265.1_Myco_tube_TKK-01-0061_V1	-	TKK-01-0061
Escherichia coli KTE184	1181730	PRJNA163381	163381	Proteobacteria	Gammaproteobacteria	5.0523	50.6	-	ANWW01	4	5177	4863	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00974039	GCA_000352885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/885/GCA_000352885.1_Esch_coli_KTE184_V1	-	KTE184
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05228	39.6	-	CODI02	132	2247	2032	3/22/15	3/5/17	Contig	SC	SAMEA1463082	GCA_001114145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/145/GCA_001114145.2_7622_4_13	-	LE4020
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16286	51.5	-	FFAJ01	96	2513	2164	2/9/16	3/21/17	Scaffold	SC	SAMEA2674246	GCA_900035155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/155/GCA_900035155.1_14555_5_53	-	2842STDY5881394
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.11732	65.8	-	CVXD01	213	6909	6643	6/23/15	3/18/17	Contig	PHE	SAMEA3374664	GCA_001181905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/905/GCA_001181905.1_P60_London_6_VIM_2_11_13	-	P60_London_6_VIM_2_11_13
Acinetobacter baumannii 26016_10	1311077	PRJNA195158	195158	Proteobacteria	Gammaproteobacteria	4.16954	39.2	-	JHOU01	137	4170	3879	3/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646234	GCA_000611405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/405/GCA_000611405.1_ASM61140v1	-	26016_10
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.08445	35.4	-	FJSN01	146	2126	2012	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888223	GCA_900074145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/145/GCA_900074145.1_VSA69	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03674	41.2	-	CDTU01	55	2022	1931	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233809	GCA_000936975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/975/GCA_000936975.1_Velvet_assembly	-	E01I
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.60673	50.9	-	LXUT01	435	5049	4390	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440990	GCA_001688415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/415/GCA_001688415.1_ASM168841v1	28028547	CDPH_C119
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.76246	47.8	-	CWPJ01	563	3396	3372	7/16/15	7/16/15	Scaffold	SC	SAMEA889370	GCA_001260055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/055/GCA_001260055.1_3002_8_5	-	4670
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.20435	28.6	-	FAMR01	370	3877	3754	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664416	GCA_900015675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/675/GCA_900015675.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae MGH 31	1328369	PRJNA201946	201946	Proteobacteria	Gammaproteobacteria	5.74071	57.1	-	JCNX02	9	5911	5597	2/6/14	2/21/17	Contig	Broad Institute	SAMN02138571	GCA_000567765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/765/GCA_000567765.2_ASM56776v2	-	MGH 31
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.12629	45.2	-	LKQA01	49	4846	4643	4/28/16	3/20/17	Scaffold	FDA/CFSAN	SAMN04145916	GCA_001634165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/165/GCA_001634165.1_ASM163416v1	27315090	CFSAN025053
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.17944	37.4	-	FXJY01	164	3313	3091	4/26/17	5/6/17	Scaffold	SC	SAMEA3893488	GCA_900180015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/015/GCA_900180015.1_19789_6_95	-	VREN1846
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.98098	31.2	-	CUJE01	799	1909	1789	3/31/15	4/21/17	Scaffold	SC	SAMEA1010604	GCA_001228905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/905/GCA_001228905.1_7038_3_46	-	OXC6296
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.25941	64.1	-	FWCM01	44	5288	5077	3/16/17	3/24/17	Scaffold	SC	SAMEA2275842	GCA_900132575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/575/GCA_900132575.1_12163_2_76	-	1116
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.34799	64.2	-	FSBX01	27	5426	5281	12/14/16	3/21/17	Scaffold	SC	SAMEA2259693	GCA_900132605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/605/GCA_900132605.1_11893_6_50	-	888
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.68121	31.4	-	CUUK01	16	1728	1635	3/31/15	3/18/17	Scaffold	SC	SAMEA1401097	GCA_001228985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/985/GCA_001228985.1_7213_3_54	-	OXC6597
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.20054	37.4	-	FXJJ01	210	3343	3095	4/26/17	5/6/17	Scaffold	SC	SAMEA3893595	GCA_900180025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/025/GCA_900180025.1_19789_6_78	-	VREN1808
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.12976	45.2	-	LKQJ01	34	4842	4648	4/28/16	3/20/17	Scaffold	FDA/CFSAN	SAMN04145924	GCA_001634245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/634/245/GCA_001634245.1_ASM163424v1	27315090	CFSAN025061
Klebsiella pneumoniae KP3-S	1290996	PRJNA188682	188682	Proteobacteria	Gammaproteobacteria	5.67489	57.2	-	AOSJ01	102	5801	5572	3/6/14	2/21/17	Contig	Istituto Superiore di Sanita	SAMN02951923	GCA_000585875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/875/GCA_000585875.1_Kpn3159065	24379204	KP3-S
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.4288	29.7	-	FAOK01	1829	4085	3794	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664459	GCA_900015685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/685/GCA_900015685.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.98841	47.5	-	CWQS01	127	3545	3489	7/16/15	7/16/15	Scaffold	SC	SAMEA889170	GCA_001260075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/075/GCA_001260075.1_4075_3_6	-	GP143
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.63564	50.8	-	LXUR01	428	5061	4412	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440992	GCA_001688445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/445/GCA_001688445.1_ASM168844v1	28028547	CDPH_C123
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.06456	41.1	-	CDUA01	58	2058	1963	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233812	GCA_000936995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/995/GCA_000936995.1_Velvet_assembly	-	E04H
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.16123	35.6	-	FJSM01	146	2202	2080	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888222	GCA_900074155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/155/GCA_900074155.1_VSA68	-	-
Acinetobacter baumannii 25569_6	1311113	PRJNA195229	195229	Proteobacteria	Gammaproteobacteria	4.13246	39.2	-	JHOT01	107	4110	3822	3/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646232	GCA_000611425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/425/GCA_000611425.1_ASM61142v1	-	25569_6
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.15914	65.8	-	CVXB01	207	6946	6682	6/24/15	3/18/17	Contig	PHE	SAMEA3374665	GCA_001181925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/925/GCA_001181925.1_P61_London_9_VIM_2_11_13	-	P61_London_9_VIM_2_11_13
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15537	51.6	-	FFAL01	87	2515	2153	2/9/16	3/21/17	Scaffold	SC	SAMEA2674250	GCA_900035165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/165/GCA_900035165.1_14555_5_55	-	2842STDY5881396
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.11647	39.6	-	CNRF02	174	2295	2075	3/23/15	3/15/17	Contig	SC	SAMEA1032437	GCA_001114165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/165/GCA_001114165.2_6999_1_3	-	R34-3186
Escherichia coli KTE183	1181729	PRJNA163379	163379	Proteobacteria	Gammaproteobacteria	5.12037	50.6	-	ANWX01	5	5203	4869	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00974038	GCA_000352905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/905/GCA_000352905.1_Esch_coli_KTE183_V1	-	KTE183
Mycobacterium tuberculosis TKK-01-0062	1324272	PRJNA198157	198157	Terrabacteria group	Actinobacteria	4.41208	65.5	-	JLXL01	5	4296	4112	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053795	GCA_000661285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/285/GCA_000661285.1_Myco_tube_TKK-01-0062_V1	-	TKK-01-0062
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.94538	37.9	-	MDPQ01	23	3020	2931	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05256775	GCA_001709805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/805/GCA_001709805.1_ASM170980v1	-	Lm1
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.7637	30.4	-	MOVN01	26	1881	1771	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04531987	GCA_001878295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/295/GCA_001878295.1_ASM187829v1	-	CDPHFDLB-F12M00565-3
"Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1739"	866915	PRJNA50693	50693	Proteobacteria	Gammaproteobacteria	4.93011	52.1	-	AHUT01	77	5088	4841	2/1/13	5/19/17	Contig	FDA	SAMN00811527	GCA_000335935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/935/GCA_000335935.1_ASM33593v1	-	08-1739
Staphylococcus aureus KINW6002	1409502	PRJNA223822	223822	Terrabacteria group	Firmicutes	2.9307	32.9	-	JBQL01	27	3093	2921	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381563	GCA_000540095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/095/GCA_000540095.1_Stap_aure_KINW6002_V1	-	KINW6002
Staphylococcus aureus SCOA6006	1409503	PRJNA223823	223823	Terrabacteria group	Firmicutes	2.97275	32.7	-	JBQK01	14	3146	2981	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381564	GCA_000540115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/115/GCA_000540115.1_Stap_aure_SCOA6006_V1	-	SCOA6006
Salmonella enterica subsp. enterica serovar Javiana str. ATCC BAA-1593	891420	PRJNA53267	53267	Proteobacteria	Gammaproteobacteria	4.54724	52.2	-	AHUW01	51	4622	4376	2/1/13	5/19/17	Contig	FDA	SAMN02418811	GCA_000335955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/955/GCA_000335955.1_ASM33595v1	-	ATCC BAA-1593
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.72672	30.3	-	MOVM01	13	1836	1703	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04531989	GCA_001878335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/335/GCA_001878335.1_ASM187833v1	-	CDPHFDLB-F12M00566-a1
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.83755	37.9	-	MDRT01	14	2872	2795	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410830	GCA_001709825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/825/GCA_001709825.1_ASM170982v1	-	568
Mycobacterium tuberculosis TKK-01-0063	1324273	PRJNA198158	198158	Terrabacteria group	Actinobacteria	4.41106	65.5	-	JLXK01	4	4295	4119	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053796	GCA_000661305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/305/GCA_000661305.1_Myco_tube_TKK-01-0063_V1	-	TKK-01-0063
Escherichia coli KTE196	1181742	PRJNA163405	163405	Proteobacteria	Gammaproteobacteria	4.91713	50.8	-	ANWY01	4	4931	4651	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974051	GCA_000352925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/925/GCA_000352925.1_Esch_coli_KTE196_V1	-	KTE196
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.15277	39.8	-	CKUW01	65	2310	2073	3/21/15	3/11/17	Contig	SC	SAMEA1026060	GCA_001114205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/205/GCA_001114205.1_6823_3_17	-	SMRU1913
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.10724	51.8	-	FFBT01	79	2446	2107	2/9/16	3/21/17	Scaffold	SC	SAMEA2674318	GCA_900035175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/175/GCA_900035175.1_14555_5_89	-	2842STDY5881430
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.02107	65.8	-	CWFQ01	420	6761	6449	6/24/15	3/18/17	Contig	PHE	SAMEA3374666	GCA_001181945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/945/GCA_001181945.1_P64_East_of_England_6_01_14	-	P64_East_of_England_6_01_14
Acinetobacter baumannii 26016_5	1311072	PRJNA195153	195153	Proteobacteria	Gammaproteobacteria	4.17144	39.2	-	JHOS01	139	4178	3887	3/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646368	GCA_000611445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/445/GCA_000611445.1_ASM61144v1	-	26016_5
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.19243	35.5	-	FJSJ01	139	2240	2116	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888221	GCA_900074165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/165/GCA_900074165.1_VSA66	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	1.99195	41.2	-	CDTA01	70	1995	1888	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233773	GCA_000937015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/015/GCA_000937015.1_Velvet_assembly	-	B27V
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.54052	50.9	-	LXUO01	465	4959	4300	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440995	GCA_001688455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/455/GCA_001688455.1_ASM168845v1	28028547	CDPH_C126
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.05295	46.9	-	CWPZ01	85	3757	3712	7/16/15	7/16/15	Scaffold	SC	SAMEA889212	GCA_001261095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/095/GCA_001261095.1_4056_8_12	-	A482
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.37359	29	-	FANL01	1341	3962	3760	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664433	GCA_900015925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/925/GCA_900015925.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae KP4-R	1294139	PRJNA189402	189402	Proteobacteria	Gammaproteobacteria	5.67096	57.2	-	APMF01	112	5799	5572	3/6/14	2/21/17	Contig	Istituto Superiore di Sanita	SAMN02951924	GCA_000585895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/895/GCA_000585895.1_KP4-R	24379204	KP4-R
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.04512	45.3	-	LHBF01	81	4869	4606	7/28/16	4/17/17	Scaffold	FDA/CFSAN	SAMN03941071	GCA_001696135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/135/GCA_001696135.1_ASM169613v1	28330888	CFSAN018763
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.15817	37.4	-	FXJU01	145	3268	3045	4/26/17	5/6/17	Scaffold	SC	SAMEA3893494	GCA_900180035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/035/GCA_900180035.1_19789_6_97	-	VREN1872
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.77404	31.3	-	CUPB01	27	1860	1767	3/31/15	3/18/17	Scaffold	SC	SAMEA1010589	GCA_001234385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/385/GCA_001234385.1_7092_1_13	-	OXC6460
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.7988	64.2	-	FSBY01	13	4740	4618	12/14/16	3/21/17	Scaffold	SC	SAMEA2275813	GCA_900132625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/625/GCA_900132625.1_12082_5_70	-	1087
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.02283	64.1	-	FVFP01	10	5108	4941	3/10/17	3/18/17	Scaffold	SC	SAMEA2275843	GCA_900132635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/635/GCA_900132635.1_12163_2_77	-	1117
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66173	31.4	-	CUJV01	14	1715	1626	3/31/15	3/18/17	Scaffold	SC	SAMEA1010665	GCA_001235265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/265/GCA_001235265.1_7038_3_62	-	OXC6312
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.19912	37.4	-	FXJW01	215	3328	3086	4/26/17	5/6/17	Scaffold	SC	SAMEA3893611	GCA_900180045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/045/GCA_900180045.1_19789_6_88	-	VREN1838
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	5.13969	45.2	-	LHBG01	46	4904	4698	7/28/16	4/17/17	Scaffold	FDA/CFSAN	SAMN03941072	GCA_001696145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/145/GCA_001696145.1_ASM169614v1	28330888	CFSAN018764
Klebsiella pneumoniae KP2-R	1294141	PRJNA189405	189405	Proteobacteria	Gammaproteobacteria	5.66193	57.2	-	AQCI01	131	5798	5573	3/6/14	2/21/17	Contig	Istituto Superiore di Sanita	SAMN02951926	GCA_000585915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/915/GCA_000585915.1_KP2-R	24379204	KP2-R
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.10317	28.6	-	FAIG01	301	3766	3654	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664300	GCA_900016315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/315/GCA_900016315.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.98253	47.1	-	CWPY01	72	3568	3526	7/16/15	7/16/15	Scaffold	SC	SAMEA889277	GCA_001261135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/135/GCA_001261135.1_4056_8_1	-	A245
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.52786	50.8	-	LXUN01	419	4916	4303	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440996	GCA_001688475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/475/GCA_001688475.1_ASM168847v1	28028547	CDPH_C128
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.08202	41.1	-	CDWL01	59	2044	1958	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233820	GCA_000937055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/055/GCA_000937055.1_Velvet_assembly	-	E17P
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.07783	35.4	-	FJSS01	145	2119	2004	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888225	GCA_900074175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/175/GCA_900074175.1_VSA71	-	-
Acinetobacter baumannii 25569_5	1311112	PRJNA195225	195225	Proteobacteria	Gammaproteobacteria	3.9892	39.1	-	JHOR01	69	3846	3583	3/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646231	GCA_000611465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/465/GCA_000611465.1_ASM61146v1	-	25569_5
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.11244	65.8	-	CWEO01	296	6950	6620	6/24/15	3/18/17	Contig	PHE	SAMEA3374667	GCA_001181965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/965/GCA_001181965.1_P62_London_9_VIM_2_01_14	-	P62_London_9_VIM_2_01_14
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15953	51.5	-	FEQN01	89	2524	2151	2/9/16	3/21/17	Scaffold	SC	SAMEA2674557	GCA_900035405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/405/GCA_900035405.1_14355_7_91	-	2842STDY5881720
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00518	39.7	-	CNRW02	170	2139	1962	3/23/15	3/11/17	Contig	SC	SAMEA1032725	GCA_001114245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/245/GCA_001114245.2_6999_2_21	-	R34-3227
Escherichia coli KTE197	1181743	PRJNA163407	163407	Proteobacteria	Gammaproteobacteria	4.72561	50.7	-	ANWZ01	4	4818	4536	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974052	GCA_000352945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/945/GCA_000352945.1_Esch_coli_KTE197_V1	-	KTE197
Mycobacterium tuberculosis TKK-01-0064	1324274	PRJNA198159	198159	Terrabacteria group	Actinobacteria	4.4152	65.5	-	JLXJ01	7	4288	4124	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053797	GCA_000661325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/325/GCA_000661325.1_Myco_tube_TKK-01-0064_V1	-	TKK-01-0064
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.97725	37.9	-	MDRR01	18	3050	2971	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410788	GCA_001709835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/835/GCA_001709835.1_ASM170983v1	-	A12
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.65123	30.5	-	MOVL01	52	1741	1628	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04531990	GCA_001878355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/355/GCA_001878355.1_ASM187835v1	-	CDPHFDLB-F12M00566-a2
Salmonella enterica subsp. enterica serovar Montevideo str. 316111868	745016	PRJNA46537	46537	Proteobacteria	Gammaproteobacteria	4.3258	52.5	-	AHUX01	128	4382	4121	2/1/13	5/19/17	Contig	FDA	SAMN02568546	GCA_000335975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/975/GCA_000335975.1_ASM33597v1	-	316111868
Staphylococcus aureus SCOA6008	1409504	PRJNA223824	223824	Terrabacteria group	Firmicutes	2.89541	32.9	-	JBQJ01	18	3046	2875	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381565	GCA_000540135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/135/GCA_000540135.1_Stap_aure_SCOA6008_V1	-	SCOA6008
Staphylococcus aureus HOAG6025	1409506	PRJNA223826	223826	Terrabacteria group	Firmicutes	2.88784	32.8	-	JBQI01	25	3029	2861	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381567	GCA_000540155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/155/GCA_000540155.1_Stap_aure_HOAG6025_V1	-	HOAG6025
Salmonella enterica subsp. enterica serovar Dublin str. SL1438	687915	PRJNA41463	41463	Proteobacteria	Gammaproteobacteria	4.87209	52.1	-	AHUJ01	52	5036	4710	2/1/13	5/19/17	Contig	FDA	SAMN00811269	GCA_000336015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/015/GCA_000336015.1_ASM33601v1	23383127	SL1438
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.63211	30.4	-	MOVK01	53	1700	1580	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04531991	GCA_001878375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/375/GCA_001878375.1_ASM187837v1	-	CDPHFDLB-F12M00580-a1
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.90366	37.9	-	MDRS01	15	2941	2866	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410835	GCA_001709845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/845/GCA_001709845.1_ASM170984v1	-	A10
Mycobacterium tuberculosis TKK-01-0065	1324275	PRJNA198160	198160	Terrabacteria group	Actinobacteria	4.40894	65.5	-	JLXI01	8	4309	4110	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053798	GCA_000661345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/345/GCA_000661345.1_Myco_tube_TKK-01-0065_V1	-	TKK-01-0065
Escherichia coli KTE202	1181748	PRJNA163417	163417	Proteobacteria	Gammaproteobacteria	5.1952	50.6	-	ANXA01	8	5282	4962	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00974057	GCA_000352965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/965/GCA_000352965.1_Esch_coli_KTE202_V1	-	KTE202
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08081	39.5	-	COFE02	225	2228	2025	3/22/15	3/11/17	Contig	SC	SAMEA1463035	GCA_001114285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/285/GCA_001114285.2_7622_5_74	-	ND6012
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15623	51.6	-	FESX01	86	2510	2150	2/9/16	3/21/17	Scaffold	SC	SAMEA2673901	GCA_900035415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/415/GCA_900035415.1_14355_5_42	-	2842STDY5881095
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.066	65.8	-	CWFH01	307	6876	6557	6/23/15	3/18/17	Contig	PHE	SAMEA3374669	GCA_001182005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/005/GCA_001182005.1_P63_London_25_VIM_2_03_14	-	P63_London_25_VIM_2_03_14
Acinetobacter baumannii 45052_1	1311141	PRJNA195266	195266	Proteobacteria	Gammaproteobacteria	3.96185	39.1	-	JHOQ01	59	3809	3571	3/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02649526	GCA_000611485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/485/GCA_000611485.1_ASM61148v1	-	45052_1
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.08606	35.4	-	FJSI01	139	2126	2012	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888227	GCA_900074185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/185/GCA_900074185.1_VSA73	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.09881	41.1	-	CDUT01	60	2082	1988	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233840	GCA_000937155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/155/GCA_000937155.1_Velvet_assembly	-	F17K
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.7415	50.8	-	LYEP01	479	5439	4407	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440958	GCA_001688485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/485/GCA_001688485.1_ASM168848v1	28028547	CDPH_C34
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	2.85028	47.6	-	CWSS01	2637	5665	5656	7/17/15	7/17/15	Scaffold	SC	SAMEA889211	GCA_001261275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/275/GCA_001261275.1_4370_2_1	-	6180
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.19569	28.8	-	FALB01	1106	3803	3634	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664375	GCA_900016335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/335/GCA_900016335.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae KP5-R	1294138	PRJNA189401	189401	Proteobacteria	Gammaproteobacteria	5.67085	57.2	-	APMG01	115	5810	5573	3/6/14	2/21/17	Contig	Istituto Superiore di Sanita	SAMN02951925	GCA_000585935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/935/GCA_000585935.1_KP5-R	24379204	KP5-R
Vibrio parahaemolyticus	670	PRJNA350230	350230	Proteobacteria	Gammaproteobacteria	5.04286	45.2	-	MORO01	61	4856	4639	12/9/16	3/20/17	Scaffold	Guangdong CDC	SAMN05935533	GCA_001895345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/345/GCA_001895345.1_ASM189534v1	-	100149
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.94185	37.9	-	FXKF01	152	3045	2839	4/26/17	5/6/17	Scaffold	SC	SAMEA3893676	GCA_900180075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/075/GCA_900180075.1_19789_7_6	-	VREN3657
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.80701	31.1	-	CUPT01	36	1899	1775	3/31/15	3/18/17	Scaffold	SC	SAMEA1010644	GCA_001235285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/285/GCA_001235285.1_7092_1_29	-	OXC6476
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.90384	64.2	-	FVFV01	15	4897	4786	3/10/17	3/18/17	Scaffold	SC	SAMEA2068956	GCA_900132725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/725/GCA_900132725.1_10250_1_20	-	360
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21445	64	-	FSCL01	18	5277	5150	12/14/16	3/21/17	Scaffold	SC	SAMEA2259628	GCA_900132875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/875/GCA_900132875.1_11861_7_83	-	823
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.68054	31.3	-	CUMP01	18	1741	1653	3/31/15	3/18/17	Scaffold	SC	SAMEA1010473	GCA_001236625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/625/GCA_001236625.1_7065_7_40	-	OXC6386
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.94087	37.9	-	FXKE01	154	3059	2848	4/26/17	5/6/17	Scaffold	SC	SAMEA3893678	GCA_900180085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/085/GCA_900180085.1_19789_7_7	-	VREN3682
Vibrio parahaemolyticus	670	PRJNA350230	350230	Proteobacteria	Gammaproteobacteria	5.03735	45.2	-	MORT01	49	4854	4636	12/9/16	3/20/17	Scaffold	Guangdong CDC	SAMN05935541	GCA_001895355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/355/GCA_001895355.1_ASM189535v1	-	100158
Klebsiella pneumoniae KP1-I	1294140	PRJNA189404	189404	Proteobacteria	Gammaproteobacteria	5.65508	57.2	-	AQCJ01	142	5791	5556	3/6/14	2/21/17	Contig	Istituto Superiore di Sanita	SAMN02951927	GCA_000585955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/585/955/GCA_000585955.1_KP1-I	24379204	KP1-I
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.21728	28.9	-	FALD01	1300	3827	3631	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664376	GCA_900016345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/345/GCA_900016345.1_Peptoclostridium_difficile	-	-
Vibrio cholerae	666	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	3.97938	47.2	-	CWPT01	84	3509	3457	7/17/15	7/17/15	Scaffold	SC	SAMEA889403	GCA_001261515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/261/515/GCA_001261515.1_4056_7_7	-	A201
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.60336	50.8	-	LRSA01	566	5122	4330	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440933	GCA_001688545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/545/GCA_001688545.1_ASM168854v1	28028547	CDPH_C9
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03796	41.2	-	CEBK01	57	2020	1926	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234126	GCA_000937195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/195/GCA_000937195.1_Velvet_assembly	-	V39Q
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.08296	35.5	-	FJSG01	138	2119	2010	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888224	GCA_900074195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/195/GCA_900074195.1_VSA70	-	-
Acinetobacter baumannii 45057_4	1311131	PRJNA195256	195256	Proteobacteria	Gammaproteobacteria	4.01035	39	-	JHOP01	202	3960	3653	3/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02649530	GCA_000611505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/505/GCA_000611505.1_ASM61150v1	-	45057_4
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.0211	65.7	-	CVWG01	1514	7286	6039	6/24/15	3/18/17	Contig	PHE	SAMEA3374670	GCA_001182025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/025/GCA_001182025.1_E16_London_17_VIM_2_04_14	-	E16_London_17_VIM_2_04_14
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.13177	51.7	-	FESZ01	74	2493	2165	2/9/16	3/19/17	Scaffold	SC	SAMEA2673907	GCA_900035425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/425/GCA_900035425.1_14355_5_44	-	2842STDY5881097
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.19079	39.6	-	CLSI01	81	2398	2134	3/21/15	3/4/17	Contig	SC	SAMEA1028899	GCA_001114325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/325/GCA_001114325.1_6972_3_5	-	SMRU2573
Escherichia coli KTE203	1181749	PRJNA163419	163419	Proteobacteria	Gammaproteobacteria	4.81595	50.6	-	ANXB01	5	4936	4629	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974058	GCA_000352985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/352/985/GCA_000352985.1_Esch_coli_KTE203_V1	-	KTE203
Mycobacterium tuberculosis TKK-01-0066	1324276	PRJNA198161	198161	Terrabacteria group	Actinobacteria	4.41308	65.6	-	JLXH01	7	4296	4143	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053799	GCA_000661365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/365/GCA_000661365.1_Myco_tube_TKK-01-0066_V1	-	TKK-01-0066
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.07202	37.8	-	MDRO01	41	3177	3071	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410802	GCA_001709885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/885/GCA_001709885.1_ASM170988v1	-	A144
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.62873	30.4	-	MOVJ01	30	1696	1587	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04531992	GCA_001878385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/385/GCA_001878385.1_ASM187838v1	-	CDPHFDLB-F12M00580-a2
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA41465	41465	Proteobacteria	Gammaproteobacteria	4.8693	52.1	-	AHUK01	98	5052	4666	2/1/13	5/19/17	Contig	FDA	SAMN00811271	GCA_000336035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/035/GCA_000336035.1_ASM33603v1	23383127	HWS51
Staphylococcus aureus GGMC6003	1409510	PRJNA223830	223830	Terrabacteria group	Firmicutes	2.92641	32.9	-	JBQH01	28	3079	2897	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381571	GCA_000540175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/175/GCA_000540175.1_Stap_aure_GGMC6003_V1	-	GGMC6003
Staphylococcus aureus COAS6049	1409511	PRJNA223831	223831	Terrabacteria group	Firmicutes	2.94345	32.7	-	JBQG01	15	3135	2973	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381572	GCA_000540195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/195/GCA_000540195.1_Stap_aure_COAS6049_V1	-	COAS6049
Salmonella enterica subsp. enterica serovar Enteritidis str. SE8a	696870	PRJNA41915	41915	Proteobacteria	Gammaproteobacteria	4.69127	52.1	-	AHUL01	151	4868	4508	2/1/13	5/19/17	Contig	FDA	SAMN01041179	GCA_000336055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/055/GCA_000336055.1_ASM33605v1	23383127	SE8a
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.62673	30.5	-	MOVI01	92	1704	1577	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04531993	GCA_001878395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/395/GCA_001878395.1_ASM187839v1	-	CDPHFDLB-F12M00581-a1
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.884	37.9	-	MDRQ01	22	2906	2821	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410749	GCA_001709895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/895/GCA_001709895.1_ASM170989v1	-	A13
Mycobacterium tuberculosis TKK-01-0067	1324277	PRJNA198162	198162	Terrabacteria group	Actinobacteria	4.43645	65.4	-	JLXG01	7	4321	4112	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053800	GCA_000661385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/385/GCA_000661385.1_Myco_tube_TKK-01-0067_V1	-	TKK-01-0067
Escherichia coli KTE207	1181753	PRJNA163427	163427	Proteobacteria	Gammaproteobacteria	5.04716	50.5	-	ANXC01	6	5104	4790	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00974062	GCA_000353005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/005/GCA_000353005.1_Esch_coli_KTE207_V1	-	KTE207
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05803	39.6	-	CNVS02	175	2244	2027	3/23/15	3/11/17	Contig	SC	SAMEA1032511	GCA_001114345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/345/GCA_001114345.2_6999_7_5	-	342672
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16161	51.5	-	FEWL01	76	2509	2148	2/9/16	3/21/17	Scaffold	SC	SAMEA2674269	GCA_900035435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/435/GCA_900035435.1_14555_6_58	-	2842STDY5881495
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	7.22556	65.6	-	CVWL01	383	7031	6724	6/23/15	3/18/17	Contig	PHE	SAMEA3374632	GCA_001182945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/945/GCA_001182945.1_P44_Wales_1_VIM_2_11_12	-	P44_Wales_1_VIM_2_11_12
Acinetobacter baumannii 26016_8	1311075	PRJNA195156	195156	Proteobacteria	Gammaproteobacteria	4.17195	39.1	-	JHOO01	186	4218	3900	3/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646370	GCA_000611525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/525/GCA_000611525.1_ASM61152v1	-	26016_8
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.08627	35.4	-	FJSR01	141	2126	2012	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888226	GCA_900074205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/205/GCA_900074205.1_VSA72	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05725	41.1	-	CDSM01	65	2061	1946	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233760	GCA_000937235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/235/GCA_000937235.1_Velvet_assembly	-	B18I
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.49082	50.8	-	LRSB01	506	4831	4251	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440934	GCA_001688555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/555/GCA_001688555.1_ASM168855v1	28028547	CDPH_C10
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.1447	28.6	-	CZXV01	477	3762	3649	3/31/16	3/19/17	Contig	UNIVERSITE LAVAL	SAMEA3664026	GCA_900019305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/305/GCA_900019305.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae Kb677	1310159	PRJNA194110	194110	Proteobacteria	Gammaproteobacteria	5.89476	56.9	-	AQPG01	12	5816	5573	3/25/14	2/21/17	Contig	Los Alamos National Laboratory	SAMN02666510	GCA_000599905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/905/GCA_000599905.1_KPB_4_IHQD	24948759	Kb677
Vibrio parahaemolyticus	670	PRJNA350230	350230	Proteobacteria	Gammaproteobacteria	5.13329	45.3	-	MORS01	43	4978	4763	12/9/16	3/20/17	Scaffold	Guangdong CDC	SAMN05935538	GCA_001895365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/365/GCA_001895365.1_ASM189536v1	-	100154
Enterococcus faecium	1352	PRJEB13192	330639	Terrabacteria group	Firmicutes	3.07991	37.6	-	FXKI01	159	3220	2936	4/26/17	5/6/17	Scaffold	SC	SAMEA3941992	GCA_900180115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/115/GCA_900180115.1_19789_8_32	-	VREN3292
Campylobacter coli	195	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.77258	31.2	-	CUSX01	25	1828	1717	3/31/15	3/18/17	Scaffold	SC	SAMEA1401126	GCA_001236965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/965/GCA_001236965.1_7213_3_16	-	OXC6559
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.8569	64.2	-	FVGF01	9	4901	4765	3/10/17	3/18/17	Scaffold	SC	SAMEA2259603	GCA_900132895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/895/GCA_900132895.1_11861_7_63	-	798
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.97337	64.1	-	FSCK01	16	4958	4803	12/14/16	3/21/17	Scaffold	SC	SAMEA2259633	GCA_900132905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/905/GCA_900132905.1_11861_7_88	-	828
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.79334	31	-	CYRA01	162	1866	1720	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487068	GCA_001291485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/485/GCA_001291485.1_RC282_S32contigs.fa	-	RC282
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.1935	37.4	-	FXKJ01	166	3344	3099	4/26/17	5/6/17	Scaffold	SC	SAMEA3894133	GCA_900180125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/125/GCA_900180125.1_19952_1_18	-	VREN1745
Vibrio parahaemolyticus	670	PRJNA350230	350230	Proteobacteria	Gammaproteobacteria	5.09558	45.3	-	MORN01	51	4893	4688	12/9/16	3/20/17	Scaffold	Guangdong CDC	SAMN05935534	GCA_001895425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/425/GCA_001895425.1_ASM189542v1	-	100150
Klebsiella pneumoniae Kb140	1310158	PRJNA194107	194107	Proteobacteria	Gammaproteobacteria	5.67771	57.2	-	AQRD01	8	5824	5563	3/25/14	2/21/17	Contig	Los Alamos National Laboratory	SAMN02666509	GCA_000599925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/925/GCA_000599925.1_KPB_3_IHQD	24948759	Kb140
Clostridioides difficile	1496	PRJEB8702	320491	Terrabacteria group	Firmicutes	4.42392	29.4	-	FJOH01	624	4030	3840	5/4/16	3/20/17	Contig	UNIVERSITY OF WARWICK	SAMEA3294007	GCA_900073085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/085/GCA_900073085.1_CD105KSE1	-	CD105KSE1
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.49082	50.8	-	LRSC01	506	4831	4251	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440935	GCA_001688585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/585/GCA_001688585.1_ASM168858v1	28028547	CDPH_C11
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	1.9813	41.2	-	CDSL01	64	1975	1870	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233757	GCA_000937255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/255/GCA_000937255.1_Velvet_assembly	-	B11G
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.08601	35.4	-	FJSK01	139	2124	2010	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888228	GCA_900074215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/215/GCA_900074215.1_VSA74	-	-
Acinetobacter baumannii 16553_8	1311105	PRJNA195196	195196	Proteobacteria	Gammaproteobacteria	4.18195	39.2	-	JHPH01	86	4135	3891	3/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646225	GCA_000611545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/545/GCA_000611545.1_ASM61154v1	-	16553_8
Pseudomonas aeruginosa	287	PRJNA288992	288992	Proteobacteria	Gammaproteobacteria	6.36541	66.6	-	LFXS01	53	6056	5795	9/9/15	3/18/17	Contig	Universite de Lyon	SAMN03840633	GCA_001280755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/755/GCA_001280755.1_ASM128075v1	26586898	EML528
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.19267	51.6	-	FEXT01	104	2557	2201	2/9/16	3/21/17	Scaffold	SC	SAMEA2674460	GCA_900035445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/445/GCA_900035445.1_14355_7_16	-	2842STDY5881645
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.02988	39.7	-	CKUF01	59	2212	2011	3/21/15	3/4/17	Contig	SC	SAMEA1025723	GCA_001114425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/425/GCA_001114425.1_6823_2_19	-	SMRU1891
Escherichia coli KTE209	1181755	PRJNA163431	163431	Proteobacteria	Gammaproteobacteria	5.11008	50.5	-	ANXD01	3	5213	4901	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00974064	GCA_000353025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/025/GCA_000353025.1_Esch_coli_KTE209_V1	-	KTE209
Mycobacterium tuberculosis TKK-01-0068	1324278	PRJNA198163	198163	Terrabacteria group	Actinobacteria	4.39797	65.6	-	JLXF01	2	4279	4110	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053801	GCA_000661405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/405/GCA_000661405.1_Myco_tube_TKK-01-0068_V1	-	TKK-01-0068
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.93861	37.9	-	MDRP01	20	2986	2909	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410768	GCA_001709905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/905/GCA_001709905.1_ASM170990v1	-	A142
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.63041	30.4	-	MOVH01	81	1711	1584	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04531994	GCA_001878435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/435/GCA_001878435.1_ASM187843v1	-	CDPHFDLB-F12M00581-a2
Salmonella enterica subsp. enterica serovar Enteritidis str. 20037	696864	PRJNA41917	41917	Proteobacteria	Gammaproteobacteria	4.70126	52.1	-	AHUM01	248	4939	4506	2/1/13	5/19/17	Contig	FDA	SAMN01041086	GCA_000336075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/075/GCA_000336075.1_ASM33607v1	23383127	20037
Staphylococcus aureus KINW6003	1409514	PRJNA223834	223834	Terrabacteria group	Firmicutes	2.92343	32.7	-	JBQE01	6	3084	2917	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381575	GCA_000540215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/215/GCA_000540215.1_Stap_aure_KINW6003_V1	-	KINW6003
Staphylococcus aureus UCIM6050	1409516	PRJNA223836	223836	Terrabacteria group	Firmicutes	2.90704	32.8	-	JBQC01	31	3058	2866	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381577	GCA_000540235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/235/GCA_000540235.1_Stap_aure_UCIM6050_V1	-	UCIM6050
Salmonella enterica subsp. enterica serovar Enteritidis str. PT23	696868	PRJNA41933	41933	Proteobacteria	Gammaproteobacteria	4.7214	52.1	-	AHUR01	113	4863	4571	2/1/13	5/19/17	Contig	FDA	SAMN01041174	GCA_000336115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/115/GCA_000336115.1_ASM33611v1	23383127	PT23
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.63132	30.4	-	MOVG01	42	1699	1585	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04531995	GCA_001878455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/455/GCA_001878455.1_ASM187845v1	-	CDPHFDLB-F12M00582-a1
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.97735	37.9	-	MDRN01	19	3051	2970	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410789	GCA_001709945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/945/GCA_001709945.1_ASM170994v1	-	A15
Mycobacterium tuberculosis TKK-01-0070	1324279	PRJNA198164	198164	Terrabacteria group	Actinobacteria	4.43725	65.5	-	JLXD01	6	4311	4118	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053802	GCA_000661425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/425/GCA_000661425.1_Myco_tube_TKK-01-0070_V1	-	TKK-01-0070
Escherichia coli KTE211	1181757	PRJNA163435	163435	Proteobacteria	Gammaproteobacteria	5.00271	50.7	-	ANXE01	9	5121	4758	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974066	GCA_000353045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/045/GCA_000353045.1_Esch_coli_KTE211_V1	-	KTE211
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05895	39.5	-	CNZJ02	181	2205	2016	3/23/15	3/11/17	Contig	SC	SAMEA1463283	GCA_001114465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/465/GCA_001114465.2_7553_5_67	-	PT8013
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16695	51.5	-	FEYQ01	96	2533	2165	2/9/16	3/21/17	Scaffold	SC	SAMEA2674115	GCA_900035455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/455/GCA_900035455.1_14555_5_7	-	2842STDY5881348
Pseudomonas aeruginosa	287	PRJNA289008	289008	Proteobacteria	Gammaproteobacteria	6.33348	66.6	-	LFXR01	120	6115	5771	9/9/15	3/18/17	Contig	Universite de Lyon	SAMN03840672	GCA_001280765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/765/GCA_001280765.1_ASM128076v1	26586898	EML548
Acinetobacter baumannii 16553_1	1311098	PRJNA195179	195179	Proteobacteria	Gammaproteobacteria	4.09988	39.2	-	JHPM01	88	4039	3801	3/28/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646220	GCA_000611565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/565/GCA_000611565.1_ASM61156v1	-	16553_1
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.07744	35.5	-	FJSQ01	142	2115	2008	9/30/16	3/21/17	Contig	INSTITUT PASTEUR	SAMEA3888229	GCA_900074225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/225/GCA_900074225.1_VSA75	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04697	41.2	-	CDXY01	56	2039	1944	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234065	GCA_000937375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/375/GCA_000937375.1_Velvet_assembly	-	S7Q
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.51453	50.8	-	LRSD01	509	4900	4277	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440936	GCA_001688605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/605/GCA_001688605.1_ASM168860v1	28028547	CDPH_C12
Clostridioides difficile	1496	PRJEB8702	320491	Terrabacteria group	Firmicutes	4.26263	28.6	-	FJOI01	124	3979	3837	5/4/16	3/20/17	Contig	UNIVERSITY OF WARWICK	SAMEA3294010	GCA_900073115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/115/GCA_900073115.1_CD105KSE6	-	CD105KSE6
Klebsiella pneumoniae MGH 63	1438786	PRJNA234262	234262	Proteobacteria	Gammaproteobacteria	5.75335	56.9	-	JJNB01	155	5799	5487	4/15/14	2/21/17	Contig	Broad Institute	SAMN02581395	GCA_000688155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/155/GCA_000688155.1_Kleb_pneu_MGH_63_V1	-	MGH 63
Vibrio parahaemolyticus	670	PRJNA350230	350230	Proteobacteria	Gammaproteobacteria	5.16465	45.3	-	MORQ01	65	4962	4744	12/9/16	3/20/17	Scaffold	Guangdong CDC	SAMN05935536	GCA_001895435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/435/GCA_001895435.1_ASM189543v1	-	100152
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.08364	37.5	-	FXKR01	149	3216	2976	4/26/17	5/6/17	Scaffold	SC	SAMEA3894134	GCA_900180135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/135/GCA_900180135.1_19952_1_19	-	VREN1777
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.8335	31	-	CYQJ01	112	1934	1785	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487049	GCA_001291525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/525/GCA_001291525.1_RC105_S13contigs.fa	-	RC105
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.04409	64.1	-	FVGH01	15	5057	4937	3/10/17	3/18/17	Scaffold	SC	SAMEA2259657	GCA_900132915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/915/GCA_900132915.1_11861_8_16	-	852
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.91187	64.1	-	FVGE01	5	4957	4823	3/10/17	3/18/17	Scaffold	SC	SAMEA2259602	GCA_900132925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/925/GCA_900132925.1_11861_7_62	-	797
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.84137	31	-	CYRI01	164	1950	1801	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487074	GCA_001291545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/545/GCA_001291545.1_RC382_S38contigs.fa	-	RC382
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.19365	37.4	-	FXKL01	168	3343	3099	4/26/17	5/6/17	Scaffold	SC	SAMEA3894135	GCA_900180145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/145/GCA_900180145.1_19952_1_20	-	VREN1800
Vibrio parahaemolyticus	670	PRJNA350230	350230	Proteobacteria	Gammaproteobacteria	5.09007	45.3	-	MORR01	47	4891	4696	12/9/16	3/20/17	Scaffold	Guangdong CDC	SAMN05935537	GCA_001895445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/445/GCA_001895445.1_ASM189544v1	-	100153
Klebsiella pneumoniae UCI 64	1438809	PRJNA234137	234137	Proteobacteria	Gammaproteobacteria	5.41755	57.2	-	JJNI01	164	5441	5162	4/15/14	2/21/17	Contig	Broad Institute	SAMN02581270	GCA_000688175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/175/GCA_000688175.1_Kleb_pneu_UCI_64_V1	-	UCI 64
Clostridioides difficile	1496	PRJEB8702	320491	Terrabacteria group	Firmicutes	4.39516	29.1	-	FJOJ01	378	4045	3891	5/4/16	3/20/17	Contig	UNIVERSITY OF WARWICK	SAMEA3297403	GCA_900073125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/125/GCA_900073125.1_CD105KSE5	-	CD105KSE5
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.59345	50.9	-	LXVU01	602	5133	4347	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440937	GCA_001688745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/745/GCA_001688745.1_ASM168874v1	28028547	CDPH_C13
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.06459	41.1	-	CDVL01	58	2054	1951	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233866	GCA_000937595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/595/GCA_000937595.1_Velvet_assembly	-	F5K
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.18102	35.5	-	FJSF01	99	2221	2127	9/30/16	3/21/17	Contig	INSTITUT PASTEUR	SAMEA3888274	GCA_900074235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/235/GCA_900074235.1_VSA76	-	-
Acinetobacter baumannii 24975_10	1310954	PRJNA195031	195031	Proteobacteria	Gammaproteobacteria	4.03158	39.2	-	JIDE01	113	3988	3731	4/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02649419	GCA_000627335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/335/GCA_000627335.1_ASM62733v1	-	24975_10
Pseudomonas aeruginosa	287	PRJNA269551	269551	Proteobacteria	Gammaproteobacteria	6.36233	66.6	-	LJGL01	80	6092	5801	9/18/15	3/18/17	Contig	CSIRO	SAMN03268354	GCA_001294675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/294/675/GCA_001294675.1_ASM129467v1	26114428	ATCC 9027
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.09882	51.8	-	FEYV01	78	2427	2115	2/9/16	3/19/17	Scaffold	SC	SAMEA2674131	GCA_900035465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/465/GCA_900035465.1_14555_5_12	-	2842STDY5881353
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.13504	39.7	-	CMWA01	97	2281	2009	3/23/15	3/15/17	Contig	SC	SAMEA1022782	GCA_001114505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/505/GCA_001114505.1_5756_6_6	-	302
Escherichia coli KTE215	1181761	PRJNA163443	163443	Proteobacteria	Gammaproteobacteria	5.06599	50.5	-	ANXF01	9	5104	4793	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00974070	GCA_000353065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/065/GCA_000353065.1_Esch_coli_KTE215_V1	-	KTE215
Mycobacterium tuberculosis TKK-01-0071	1324280	PRJNA198167	198167	Terrabacteria group	Actinobacteria	4.39963	65.6	-	JLXC01	1	4276	4112	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053803	GCA_000661445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/445/GCA_000661445.1_Myco_tube_TKK-01-0071_V1	-	TKK-01-0071
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.91812	37.9	-	MDRM01	33	2962	2879	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410770	GCA_001709955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/955/GCA_001709955.1_ASM170995v1	-	A150
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.62975	30.4	-	MOVF01	40	1693	1579	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04531996	GCA_001878465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/465/GCA_001878465.1_ASM187846v1	-	CDPHFDLB-F12M00582-a2
Salmonella enterica subsp. enterica serovar Typhimurium str. CDC_2009K1153	891424	PRJNA53275	53275	Proteobacteria	Gammaproteobacteria	4.8819	52.2	-	AHUV01	94	5027	4784	2/1/13	5/19/17	Contig	FDA	SAMN02568551	GCA_000336155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/155/GCA_000336155.1_ASM33615v1	-	CDC_2009K1153
Staphylococcus aureus OCMM6015	1409518	PRJNA223838	223838	Terrabacteria group	Firmicutes	2.88512	32.8	-	JBQB01	24	3022	2849	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381579	GCA_000540255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/255/GCA_000540255.1_Stap_aure_OCMM6015_V1	-	OCMM6015
Staphylococcus aureus UCIM6047	1409522	PRJNA223842	223842	Terrabacteria group	Firmicutes	2.86167	32.8	-	JBQA01	50	2987	2846	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381583	GCA_000540275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/275/GCA_000540275.1_Stap_aure_UCIM6047_V1	-	UCIM6047
Salmonella enterica subsp. enterica serovar Tennessee str. 4535	749930	PRJNA46931	46931	Proteobacteria	Gammaproteobacteria	4.75437	52.3	-	AHUY01	59	4804	4525	2/1/13	5/19/17	Contig	FDA	SAMN02568553	GCA_000336175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/175/GCA_000336175.1_ASM33617v1	-	4535
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.63114	30.7	-	MPBK01	91	1708	1589	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04158365	GCA_001878485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/485/GCA_001878485.1_ASM187848v1	-	CDPHFDLB-F12M00583-b1
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.97703	37.9	-	MDRK01	20	3050	2970	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410750	GCA_001709965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/965/GCA_001709965.1_ASM170996v1	-	A17
Mycobacterium tuberculosis TKK-01-0073	1324281	PRJNA198168	198168	Terrabacteria group	Actinobacteria	4.41175	65.6	-	JLXA01	1	4284	4111	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053804	GCA_000661465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/465/GCA_000661465.1_Myco_tube_TKK-01-0073_V1	-	TKK-01-0073
Escherichia coli KTE217	1181763	PRJNA163447	163447	Proteobacteria	Gammaproteobacteria	4.95092	50.4	-	ANXG01	7	5055	4779	12/19/12	2/22/17	Scaffold	Broad Institute	SAMN00974072	GCA_000353085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/085/GCA_000353085.1_Esch_coli_KTE217_V1	-	KTE217
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0951	39.5	-	CNVI02	134	2317	2096	3/22/15	3/11/17	Contig	SC	SAMEA1032635	GCA_001114525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/525/GCA_001114525.2_6999_7_16	-	385385
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.14973	51.6	-	FFAY01	61	2497	2148	2/9/16	3/21/17	Scaffold	SC	SAMEA2674276	GCA_900035475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/475/GCA_900035475.1_14555_5_68	-	2842STDY5881409
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48892	66.3	-	CUWZ01	76	6172	6012	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3294409	GCA_001373595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/595/GCA_001373595.1_212_Rw184_contigs_500	-	-
Acinetobacter baumannii 44839_10	1311067	PRJNA195148	195148	Proteobacteria	Gammaproteobacteria	4.0745	39.3	-	JIDD01	111	4010	3745	4/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646382	GCA_000627355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/355/GCA_000627355.1_ASM62735v1	-	44839_10
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.08374	35.4	-	FJSP01	142	2125	2012	9/30/16	3/21/17	Contig	INSTITUT PASTEUR	SAMEA3888230	GCA_900074245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/245/GCA_900074245.1_VSA77	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	1.98272	41.2	-	CDSY01	60	1976	1875	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233771	GCA_000937635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/635/GCA_000937635.1_Velvet_assembly	-	B26N
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.6663	50.7	-	LXVR01	511	5183	4402	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440942	GCA_001688755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/755/GCA_001688755.1_ASM168875v1	28028547	CDPH_C18
Clostridioides difficile	1496	PRJEB8702	320491	Terrabacteria group	Firmicutes	4.22813	28.7	-	FJQG01	122	3923	3792	5/4/16	3/20/17	Contig	UNIVERSITY OF WARWICK	SAMEA3297402	GCA_900073255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/073/255/GCA_900073255.1_CD105KSE2	-	CD105KSE2
Klebsiella pneumoniae UCI 60	1438805	PRJNA234133	234133	Proteobacteria	Gammaproteobacteria	5.15597	57.7	-	JJNJ01	53	5122	4919	4/15/14	2/21/17	Contig	Broad Institute	SAMN02581266	GCA_000688195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/195/GCA_000688195.1_Kleb_pneu_UCI_60_V1	-	UCI 60
Vibrio parahaemolyticus	670	PRJNA350230	350230	Proteobacteria	Gammaproteobacteria	5.07885	45.3	-	MORU01	57	4915	4695	12/9/16	3/20/17	Scaffold	Guangdong CDC	SAMN05935539	GCA_001895465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/465/GCA_001895465.1_ASM189546v1	-	100156
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.04001	37.7	-	FXKM01	154	3137	2906	4/26/17	5/6/17	Scaffold	SC	SAMEA3894137	GCA_900180155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/155/GCA_900180155.1_19952_1_22	-	VREN2306
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.81505	31	-	CYQO01	172	1915	1724	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487054	GCA_001291605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/605/GCA_001291605.1_RC148_S18contigs.fa	-	RC148
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.93289	64.1	-	FSCM01	17	4929	4773	12/14/16	3/21/17	Scaffold	SC	SAMEA2259623	GCA_900132935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/935/GCA_900132935.1_11861_8_10	-	818
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.08999	64.1	-	FVGJ01	29	5107	4956	3/10/17	3/18/17	Scaffold	SC	SAMEA2259718	GCA_900132945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/945/GCA_900132945.1_11861_8_30	-	913
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.79184	31.1	-	CYQW01	204	1920	1676	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487063	GCA_001291665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/665/GCA_001291665.1_RC264_S27contigs.fa	-	RC264
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.07482	37.5	-	FXKQ01	165	3234	2949	4/26/17	5/6/17	Scaffold	SC	SAMEA3894136	GCA_900180165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/165/GCA_900180165.1_19952_1_21	-	VREN1870
Vibrio parahaemolyticus	670	PRJNA350230	350230	Proteobacteria	Gammaproteobacteria	5.05363	45.3	-	MOSF01	43	4882	4664	12/9/16	3/20/17	Scaffold	Guangdong CDC	SAMN05935532	GCA_001895525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/525/GCA_001895525.1_ASM189552v1	-	100148
Klebsiella pneumoniae MGH 75	1438798	PRJNA234115	234115	Proteobacteria	Gammaproteobacteria	5.7577	56.9	-	JJNK01	154	5789	5485	4/15/14	2/21/17	Contig	Broad Institute	SAMN02581248	GCA_000688215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/215/GCA_000688215.1_Kleb_pneu_MGH_75_V1	-	MGH 75
Clostridioides difficile	1496	PRJEB8702	320491	Terrabacteria group	Firmicutes	4.29506	28.4	-	FJUF01	189	3971	3832	5/4/16	3/20/17	Contig	UNIVERSITY OF WARWICK	SAMEA3294008	GCA_900074635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/635/GCA_900074635.1_CD105KSE3	-	CD105KSE3
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.62658	50.5	-	LXVT01	630	5073	4366	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440938	GCA_001688775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/775/GCA_001688775.1_ASM168877v1	28028547	CDPH_C14
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05971	41.1	-	CDSR01	57	2051	1960	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233766	GCA_000937675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/675/GCA_000937675.1_Velvet_assembly	-	B23J
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.08648	35.4	-	FJSO01	137	2124	2013	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888232	GCA_900074255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/255/GCA_900074255.1_VSA79	-	-
Acinetobacter baumannii 26016_9	1311076	PRJNA195157	195157	Proteobacteria	Gammaproteobacteria	4.15986	39.1	-	JIDC01	134	4161	3873	4/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646381	GCA_000627375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/375/GCA_000627375.1_ASM62737v1	-	26016_9
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.4886	66.3	-	CTCQ01	71	6166	6014	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3294410	GCA_001373615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/615/GCA_001373615.1_213_Tsb_1_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12708	51.7	-	FFBS01	82	2483	2150	2/9/16	3/19/17	Scaffold	SC	SAMEA2674316	GCA_900035485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/485/GCA_900035485.1_14555_5_88	-	2842STDY5881429
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.03506	39.7	-	CKJA01	52	2239	2032	3/21/15	3/4/17	Contig	SC	SAMEA1023971	GCA_001114645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/645/GCA_001114645.1_6631_4_23	-	23B
Escherichia coli KTE218	1181764	PRJNA163449	163449	Proteobacteria	Gammaproteobacteria	5.12605	50.5	-	ANXH01	5	5178	4872	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00974073	GCA_000353105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/105/GCA_000353105.1_Esch_coli_KTE218_V1	-	KTE218
Mycobacterium tuberculosis TKK-01-0074	1324282	PRJNA198169	198169	Terrabacteria group	Actinobacteria	4.40348	65.6	-	JLWZ01	1	4277	4112	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053805	GCA_000661485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/485/GCA_000661485.1_Myco_tube_TKK-01-0074_V1	-	TKK-01-0074
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.97412	37.9	-	MDRJ01	20	3051	2968	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410801	GCA_001710005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/005/GCA_001710005.1_ASM171000v1	-	A18
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.62604	30.8	-	MOVE01	169	1732	1555	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04158366	GCA_001878515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/515/GCA_001878515.1_ASM187851v1	-	CDPHFDLB-F12M00583-b2
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2-4_delta.ramA::kan	1159900	PRJNA51207	51207	Proteobacteria	Gammaproteobacteria	4.8036	52.2	-	AHUZ01	60	4969	4666	2/1/13	5/19/17	Contig	FDA	SAMN00811538	GCA_000336195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/195/GCA_000336195.1_ASM33619v1	-	LT2-4_delta.ramA::kan
Staphylococcus aureus WAMC6046	1409525	PRJNA223845	223845	Terrabacteria group	Firmicutes	2.85071	32.9	-	JBPZ01	15	2979	2814	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381586	GCA_000540295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/295/GCA_000540295.1_Stap_aure_WAMC6046_V1	-	WAMC6046
Staphylococcus aureus SMMC6022	1409527	PRJNA223847	223847	Terrabacteria group	Firmicutes	2.88622	32.8	-	JBPY01	22	3014	2871	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381588	GCA_000540315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/315/GCA_000540315.1_Stap_aure_SMMC6022_V1	-	SMMC6022
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2-4	1159899	PRJNA51209	51209	Proteobacteria	Gammaproteobacteria	4.80735	52.2	-	AHVA01	33	4952	4679	2/1/13	5/19/17	Contig	FDA	SAMN02664995	GCA_000336215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/215/GCA_000336215.1_ASM33621v1	-	LT2-4
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.69091	30.4	-	MOUG01	52	1805	1694	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN05163882	GCA_001878525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/525/GCA_001878525.1_ASM187852v1	-	CDPHFDLB-F15M00668P2
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.88285	37.9	-	MDRF01	25	2886	2809	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410822	GCA_001710015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/015/GCA_001710015.1_ASM171001v1	-	A31
Mycobacterium tuberculosis TKK-01-0075	1324283	PRJNA198170	198170	Terrabacteria group	Actinobacteria	4.40294	65.6	-	JLWY01	2	4291	4126	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053806	GCA_000661505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/505/GCA_000661505.1_Myco_tube_TKK-01-0075_V1	-	TKK-01-0075
Escherichia coli KTE223	1181769	PRJNA163459	163459	Proteobacteria	Gammaproteobacteria	5.10055	50.4	-	ANXI01	9	5205	4885	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00974078	GCA_000353125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/125/GCA_000353125.1_Esch_coli_KTE223_V1	-	KTE223
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07286	39.7	-	CKTG01	65	2288	2077	3/21/15	3/4/17	Contig	SC	SAMEA1025410	GCA_001114705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/705/GCA_001114705.1_6807_3_22	-	SMRU1630
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.20372	51.6	-	FEQE01	73	2585	2210	2/9/16	3/21/17	Scaffold	SC	SAMEA2674458	GCA_900035545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/545/GCA_900035545.1_14355_7_15	-	2842STDY5881644
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.49341	66.3	-	CTDC01	86	6176	6016	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3294411	GCA_001373635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/635/GCA_001373635.1_234_Rw27_contigs_500	-	-
Acinetobacter baumannii 24860_1	1310835	PRJNA194911	194911	Proteobacteria	Gammaproteobacteria	4.09954	39.3	-	JIDG01	117	4045	3768	4/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02649417	GCA_000627395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/395/GCA_000627395.1_ASM62739v1	-	24860_1
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.07468	35.5	-	FJTG01	141	2111	2002	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888231	GCA_900074265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/265/GCA_900074265.1_VSA78	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.06011	41.1	-	CEBN01	52	2048	1952	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234043	GCA_000937755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/755/GCA_000937755.1_Velvet_assembly	-	S2U
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.48694	50.9	-	LXVS01	535	4976	4219	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440941	GCA_001688785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/785/GCA_001688785.1_ASM168878v1	28028547	CDPH_C17
Clostridioides difficile	1496	PRJEB8702	320491	Terrabacteria group	Firmicutes	4.5574	28.7	-	FJUG01	440	4209	4021	5/4/16	3/20/17	Contig	UNIVERSITY OF WARWICK	SAMEA3294009	GCA_900074645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/645/GCA_900074645.1_CD105KSE4	-	CD105KSE4
Klebsiella pneumoniae CHS 21	1438727	PRJNA234190	234190	Proteobacteria	Gammaproteobacteria	5.56548	57.1	-	JJNF01	106	5599	5351	4/15/14	2/21/17	Contig	Broad Institute	SAMN02581323	GCA_000688535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/535/GCA_000688535.1_Kleb_pneu_CHS_21_V1	-	CHS 21
Vibrio parahaemolyticus	670	PRJNA350230	350230	Proteobacteria	Gammaproteobacteria	5.07667	45.3	-	MOSE01	48	4919	4704	12/9/16	3/20/17	Scaffold	Guangdong CDC	SAMN05935531	GCA_001895535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/535/GCA_001895535.1_ASM189553v1	-	100147
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	2.96406	37.7	-	FXKK01	152	3056	2869	4/26/17	5/6/17	Scaffold	SC	SAMEA3894139	GCA_900180175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/175/GCA_900180175.1_19952_1_24	-	VREN2773
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.80298	31	-	CYRJ01	268	1933	1695	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487075	GCA_001291725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/725/GCA_001291725.1_RC383_S39contigs.fa	-	RC383
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23128	64	-	FVGG01	28	5282	5133	3/10/17	3/18/17	Scaffold	SC	SAMEA2259719	GCA_900132955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/955/GCA_900132955.1_11861_8_32	-	914
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.08517	64.1	-	FVGI01	42	5125	4934	3/10/17	3/18/17	Scaffold	SC	SAMEA2259720	GCA_900132965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/965/GCA_900132965.1_11861_8_33	-	915
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.79478	31	-	CYRE01	178	1897	1704	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487070	GCA_001291745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/745/GCA_001291745.1_RC285_S34contigs.fa	-	RC285
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.06723	37.6	-	FXKP01	170	3196	2926	4/26/17	5/6/17	Scaffold	SC	SAMEA3894144	GCA_900180185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/185/GCA_900180185.1_19952_1_29	-	VREN3288
Vibrio parahaemolyticus	670	PRJNA350230	350230	Proteobacteria	Gammaproteobacteria	5.03447	45.3	-	MORM01	59	4848	4628	12/9/16	3/20/17	Scaffold	Guangdong CDC	SAMN05935525	GCA_001895585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/585/GCA_001895585.1_ASM189558v1	-	100139
Klebsiella pneumoniae CHS 16	1438722	PRJNA234185	234185	Proteobacteria	Gammaproteobacteria	5.71433	57	-	JJNG01	153	5811	5548	4/15/14	2/21/17	Contig	Broad Institute	SAMN02581318	GCA_000688555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/555/GCA_000688555.1_Kleb_pneu_CHS_16_V1	-	CHS 16
Clostridioides difficile	1496	PRJEB8702	320491	Terrabacteria group	Firmicutes	4.5214	28.4	-	FJUI01	90	4279	4124	5/4/16	3/20/17	Contig	UNIVERSITY OF WARWICK	SAMEA3294087	GCA_900074805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/805/GCA_900074805.1_CD105KSO8	-	CD105KSO8
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.47613	50.8	-	LXVK01	421	4933	4247	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440950	GCA_001688865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/865/GCA_001688865.1_ASM168886v1	28028547	CDPH_C26
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04175	41.2	-	CDXR01	53	2025	1928	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234051	GCA_000937995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/995/GCA_000937995.1_Velvet_assembly	-	S3D
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.08576	35.4	-	FJSU01	137	2125	2010	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888233	GCA_900074275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/275/GCA_900074275.1_VSA80	-	-
Acinetobacter baumannii 24860_6	1310840	PRJNA194916	194916	Proteobacteria	Gammaproteobacteria	4.04573	39.2	-	JIDF01	110	3999	3742	4/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02649418	GCA_000627415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/415/GCA_000627415.1_ASM62741v1	-	24860_6
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.49391	66.3	-	CTDD01	72	6171	6016	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3294412	GCA_001373655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/655/GCA_001373655.1_235_Rw146_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.13024	51.7	-	FFBG01	96	2500	2168	2/9/16	3/19/17	Scaffold	SC	SAMEA2674292	GCA_900035555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/555/GCA_900035555.1_14555_5_76	-	2842STDY5881417
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.08514	39.6	-	CMTB01	68	2264	2055	3/23/15	3/4/17	Contig	SC	SAMEA1022869	GCA_001114765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/765/GCA_001114765.1_5737_1_3	-	344
Escherichia coli KTE227	1181773	PRJNA163467	163467	Proteobacteria	Gammaproteobacteria	5.1391	50.5	-	ANXJ01	4	5303	4978	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00974082	GCA_000353145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/145/GCA_000353145.1_Esch_coli_KTE227_V1	-	KTE227
Mycobacterium tuberculosis TKK-01-0076	1324284	PRJNA198172	198172	Terrabacteria group	Actinobacteria	4.40195	65.6	-	JLWX01	1	4281	4114	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053807	GCA_000661525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/525/GCA_000661525.1_Myco_tube_TKK-01-0076_V1	-	TKK-01-0076
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.97736	37.9	-	MDRG01	19	3051	2971	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410753	GCA_001710025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/025/GCA_001710025.1_ASM171002v1	-	A26
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.65425	30.4	-	MOUB01	57	1756	1645	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN05163885	GCA_001878545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/545/GCA_001878545.1_ASM187854v1	-	CDPHFDLB-F15M01862-C
Salmonella enterica subsp. enterica serovar Newport str. SH111077	1275974	PRJNA184702	184702	Proteobacteria	Gammaproteobacteria	4.87267	52.1	-	AOGJ01	93	4956	4714	3/7/13	5/19/17	Contig	"University of Maryland, College Park"	SAMN02415262	GCA_000344825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/825/GCA_000344825.1_SOAPdenovo1.05	23661485	SH111077
Staphylococcus aureus MISS6033	1409529	PRJNA223849	223849	Terrabacteria group	Firmicutes	2.84463	32.7	-	JBPW01	12	2982	2819	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381590	GCA_000540335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/335/GCA_000540335.1_Stap_aure_MISS6033_V1	-	MISS6033
Staphylococcus aureus KINW6010	1409530	PRJNA223850	223850	Terrabacteria group	Firmicutes	2.88427	32.8	-	JBPV01	18	3009	2852	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381591	GCA_000540355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/355/GCA_000540355.1_Stap_aure_KINW6010_V1	-	KINW6010
Salmonella enterica subsp. enterica serovar Newport str. Shandong_3	1275977	PRJNA184703	184703	Proteobacteria	Gammaproteobacteria	4.755	52.1	-	AOGI01	66	4863	4638	3/7/13	5/19/17	Contig	"University of Maryland, College Park"	SAMN02415264	GCA_000344845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/845/GCA_000344845.1_SOAPdenovo1.05	23661485	Shandong_3
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.65643	30.4	-	MOUA01	23	1744	1646	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN05163886	GCA_001878575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/575/GCA_001878575.1_ASM187857v1	-	CDPHFDLB-F15M01862-D
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.9711	37.8	-	MDRH01	18	3039	2951	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410791	GCA_001710065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/065/GCA_001710065.1_ASM171006v1	-	A24
Mycobacterium tuberculosis TKK-01-0078	1324286	PRJNA198174	198174	Terrabacteria group	Actinobacteria	4.41229	65.5	-	JLWV01	4	4305	4098	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053809	GCA_000661555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/555/GCA_000661555.1_Myco_tube_TKK-01-0078_V1	-	TKK-01-0078
Escherichia coli KTE229	1181775	PRJNA163471	163471	Proteobacteria	Gammaproteobacteria	5.1959	50.6	-	ANXK01	3	5342	5028	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00974084	GCA_000353165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/165/GCA_000353165.1_Esch_coli_KTE229_V1	-	KTE229
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.02477	39.7	-	CPUP01	92	2222	2006	3/23/15	3/4/17	Contig	SC	SAMEA682593	GCA_001114805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/805/GCA_001114805.1_5477_6_6	-	M01_9964
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15322	51.6	-	FEWU01	86	2519	2166	2/9/16	3/19/17	Scaffold	SC	SAMEA2674197	GCA_900036235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/235/GCA_900036235.1_14324_4_89	-	2842STDY5881334
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48973	66.3	-	CTDE01	78	6165	6009	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3294413	GCA_001373675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/675/GCA_001373675.1_236_Rw196_contigs_500	-	-
Acinetobacter baumannii 44298_1	1311078	PRJNA195159	195159	Proteobacteria	Gammaproteobacteria	4.01993	39.2	-	JIDB01	107	3979	3698	4/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646372	GCA_000627495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/495/GCA_000627495.1_ASM62749v1	-	44298_1
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.16161	35.6	-	FJSV01	152	2200	2081	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888236	GCA_900074285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/285/GCA_900074285.1_VSA84	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04779	41.2	-	CDXE01	54	2035	1946	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234034	GCA_000938055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/055/GCA_000938055.1_Velvet_assembly	-	S1L
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.4621	50.9	-	LXVP01	432	4780	4245	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440945	GCA_001688875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/875/GCA_001688875.1_ASM168887v1	28028547	CDPH_C21
Clostridioides difficile	1496	PRJEB8702	320491	Terrabacteria group	Firmicutes	4.34066	29.1	-	FJUK01	424	3997	3832	5/4/16	3/20/17	Contig	UNIVERSITY OF WARWICK	SAMEA3294089	GCA_900074815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/815/GCA_900074815.1_CD105KSO10	-	CD105KSO10
Klebsiella pneumoniae CHS 08	1438714	PRJNA234177	234177	Proteobacteria	Gammaproteobacteria	5.626	57.1	-	JJNH01	177	5703	5438	4/22/14	2/21/17	Contig	Broad Institute	SAMN02581310	GCA_000688635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/635/GCA_000688635.1_Kleb_pneu_CHS_08_V1	-	CHS 08
Vibrio parahaemolyticus	670	PRJNA350230	350230	Proteobacteria	Gammaproteobacteria	5.1608	45.3	-	MORP01	40	4981	4777	12/9/16	4/10/17	Scaffold	Guangdong CDC	SAMN05935535	GCA_001895595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/595/GCA_001895595.1_ASM189559v1	-	100151
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.06468	37.6	-	FXKN01	171	3192	2921	4/26/17	5/6/17	Scaffold	SC	SAMEA3894143	GCA_900180195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/195/GCA_900180195.1_19952_1_28	-	VREN3282
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.79548	31.1	-	CYQM01	98	1884	1671	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487052	GCA_001291765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/765/GCA_001291765.1_RC126_S16contigs.fa	-	RC126
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.13932	64.2	-	FVGK01	38	5206	4975	3/10/17	3/18/17	Scaffold	SC	SAMEA2259724	GCA_900132975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/975/GCA_900132975.1_11861_8_34	-	919
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.04034	64.1	-	FVGL01	21	5054	4939	3/10/17	3/18/17	Scaffold	SC	SAMEA2259656	GCA_900132995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/995/GCA_900132995.1_11893_6_18	-	851
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.80346	31	-	CYQT01	156	1872	1705	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487058	GCA_001291785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/785/GCA_001291785.1_RC182_S22contigs.fa	-	RC182
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.11178	37.5	-	FXKO01	141	3220	2966	4/26/17	5/6/17	Scaffold	SC	SAMEA3894145	GCA_900180205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/205/GCA_900180205.1_19952_1_30	-	VREN3294
Vibrio parahaemolyticus	670	PRJNA350230	350230	Proteobacteria	Gammaproteobacteria	5.05476	45.3	-	MORV01	47	4878	4664	12/9/16	3/20/17	Scaffold	Guangdong CDC	SAMN05935540	GCA_001895635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/635/GCA_001895635.1_ASM189563v1	-	100157
Klebsiella pneumoniae MGH 59	1438784	PRJNA234258	234258	Proteobacteria	Gammaproteobacteria	5.71448	57	-	JMYX02	8	5829	5550	5/19/14	2/21/17	Contig	Broad Institute	SAMN02581391	GCA_000694475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/694/475/GCA_000694475.2_ASM69447v2	-	MGH 59
Clostridioides difficile	1496	PRJEB8702	320491	Terrabacteria group	Firmicutes	4.53163	29	-	FJVK01	514	4161	3963	5/4/16	3/20/17	Contig	UNIVERSITY OF WARWICK	SAMEA3294090	GCA_900074825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/825/GCA_900074825.1_CD105KSO11	-	CD105KSE11
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.48157	50.9	-	LXVJ01	429	4836	4256	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440951	GCA_001688885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/885/GCA_001688885.1_ASM168888v1	28028547	CDPH_C27
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.06999	41.1	-	CDXZ01	53	2066	1960	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234064	GCA_000938375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/375/GCA_000938375.1_Velvet_assembly	-	S7P
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.08612	35.4	-	FJST01	139	2125	2010	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888235	GCA_900074295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/295/GCA_900074295.1_VSA83	-	-
Acinetobacter baumannii 44298_2	1311079	PRJNA195160	195160	Proteobacteria	Gammaproteobacteria	4.0255	39.2	-	JIDA01	111	3997	3722	4/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646373	GCA_000627515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/515/GCA_000627515.1_ASM62751v1	-	44298_2
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.49442	66.3	-	CTDF01	81	6183	6015	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3294414	GCA_001373695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/695/GCA_001373695.1_237_Tsb_3_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12741	51.7	-	FFAG01	90	2490	2160	2/9/16	3/19/17	Scaffold	SC	SAMEA2674240	GCA_900036245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/245/GCA_900036245.1_14555_5_50	-	2842STDY5881391
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06317	39.6	-	COAN02	156	2260	2052	3/22/15	3/5/17	Contig	SC	SAMEA1463080	GCA_001114825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/825/GCA_001114825.2_7622_2_15	-	BR1045
Escherichia coli KTE104	1169372	PRJNA157663	157663	Proteobacteria	Gammaproteobacteria	4.97352	50.5	-	ANXL01	110	5133	4788	12/19/12	2/23/17	Scaffold	Broad Institute	SAMN00847690	GCA_000353185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/185/GCA_000353185.1_Esch_coli_KTE104_V1	-	KTE104
Mycobacterium tuberculosis TKK-01-0079	1324287	PRJNA198175	198175	Terrabacteria group	Actinobacteria	4.42186	65.5	-	JLWU01	7	4309	4108	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053810	GCA_000661575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/575/GCA_000661575.1_Myco_tube_TKK-01-0079_V1	-	TKK-01-0079
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.8762	37.9	-	MDRB01	19	2908	2819	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05256773	GCA_001710085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/085/GCA_001710085.1_ASM171008v1	-	A5
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.66263	30.5	-	MOTZ01	16	1754	1648	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN05163887	GCA_001878595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/595/GCA_001878595.1_ASM187859v1	-	CDPHFDLB-F15M01873-A
Salmonella enterica subsp. enterica serovar Newport str. JS09102	1275976	PRJNA184705	184705	Proteobacteria	Gammaproteobacteria	5.08402	51.9	-	AOGG01	98	5300	5035	3/7/13	5/19/17	Contig	"University of Maryland, College Park"	SAMN02415261	GCA_000344865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/865/GCA_000344865.1_SOAPdenovo1.05	23661485	JS09102
Staphylococcus aureus UCIM6042	1409531	PRJNA223851	223851	Terrabacteria group	Firmicutes	3.01827	32.7	-	JBPU01	55	3161	3002	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381592	GCA_000540375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/375/GCA_000540375.1_Stap_aure_UCIM6042_V1	-	UCIM6042
Staphylococcus aureus COLL6021	1409532	PRJNA223852	223852	Terrabacteria group	Firmicutes	2.89375	32.7	-	JBPT01	13	3055	2890	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381593	GCA_000540395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/395/GCA_000540395.1_Stap_aure_COLL6021_V1	-	COLL6021
Salmonella enterica subsp. enterica serovar Newport str. Henan_3	1275975	PRJNA184704	184704	Proteobacteria	Gammaproteobacteria	4.81568	52.1	-	AOGH01	77	4950	4719	3/7/13	5/19/17	Contig	"University of Maryland, College Park"	SAMN02415263	GCA_000344885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/885/GCA_000344885.1_SOAPdenovo1.05	23661485	Henan_3
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.66084	30.4	-	MOTY01	36	1765	1649	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN04442371	GCA_001878615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/615/GCA_001878615.1_ASM187861v1	-	CDPHFDLB-F15M01873-B
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.01065	37.8	-	MDRL01	29	3117	3015	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410803	GCA_001710095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/095/GCA_001710095.1_ASM171009v1	-	A152
Mycobacterium tuberculosis TKK-01-0081	1324288	PRJNA198176	198176	Terrabacteria group	Actinobacteria	4.41844	65.6	-	JLWS01	3	4289	4113	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053811	GCA_000661595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/595/GCA_000661595.1_Myco_tube_TKK-01-0081_V1	-	TKK-01-0081
Escherichia coli O104:H4 str. E92/11	1090927	PRJNA73631	73631	Proteobacteria	Gammaproteobacteria	5.33055	50.6001	plasmid pE9211p3:NZ_AHAU01000167.1/AHAU01000167.1	AHAU01	167	5675	5284	4/1/13	5/18/17	Scaffold	Uppsala University	SAMN02472043	GCA_000353545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/545/GCA_000353545.1_E92_11NrN01	23675451	E92/11
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00389	39.7	-	COFI02	147	2151	1962	3/23/15	3/11/17	Contig	SC	SAMEA1463008	GCA_001114885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/885/GCA_001114885.2_7622_5_80	-	ND6038
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.19349	51.6	-	FFCK01	98	2561	2185	2/9/16	3/21/17	Scaffold	SC	SAMEA2674155	GCA_900036255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/255/GCA_900036255.1_14555_6_12	-	2842STDY5881449
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.49172	66.3	-	CTDG01	78	6171	6012	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3294415	GCA_001373715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/715/GCA_001373715.1_238_2_5Pc_2_contigs_500	-	-
Acinetobacter baumannii 44298_4	1311081	PRJNA195162	195162	Proteobacteria	Gammaproteobacteria	4.00794	39.2	-	JICZ01	100	3958	3687	4/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646375	GCA_000627535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/535/GCA_000627535.1_ASM62753v1	-	44298_4
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.08659	35.4	-	FJSX01	145	2123	2012	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888234	GCA_900074305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/305/GCA_900074305.1_VSA81	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03838	41.2	-	CDWD01	56	2019	1918	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233835	GCA_000938435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/435/GCA_000938435.1_Velvet_assembly	-	E60I
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.54259	50.8	-	LXVB01	424	4957	4306	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440982	GCA_001688975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/975/GCA_001688975.1_ASM168897v1	28028547	CDPH_C102
Clostridioides difficile	1496	PRJEB8702	320491	Terrabacteria group	Firmicutes	4.33983	28.6	-	FJUJ01	214	4077	3941	5/4/16	3/20/17	Contig	UNIVERSITY OF WARWICK	SAMEA3294088	GCA_900074835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/835/GCA_900074835.1_CD105KSE9	-	CD105KSE9
Klebsiella pneumoniae subsp. pneumoniae KPB-1	1413252	PRJNA225494	225494	Proteobacteria	Gammaproteobacteria	5.77144	57.1	-	AYOV01	125	5915	5670	5/21/14	2/21/17	Contig	University of Siena	SAMN02384893	GCA_000695285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/285/GCA_000695285.2_SaK60	24841267	KPB-1
Vibrio parahaemolyticus	670	PRJNA350230	350230	Proteobacteria	Gammaproteobacteria	5.09109	45.3	-	MORY01	44	4879	4686	12/9/16	3/20/17	Scaffold	Guangdong CDC	SAMN05935524	GCA_001895665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/665/GCA_001895665.1_ASM189566v1	-	100138
Enterococcus faecium	1352	PRJEB13191	330638	Terrabacteria group	Firmicutes	3.1945	37.4	-	FXLA01	162	3354	3096	4/26/17	5/6/17	Scaffold	SC	SAMEA3916187	GCA_900180235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/235/GCA_900180235.1_19952_4_111	-	VREN2172
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.79713	31.1	-	CYRK01	86	1860	1735	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487077	GCA_001291845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/845/GCA_001291845.1_RC387_S41contigs.fa	-	RC387
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.31805	64.1	-	FWCO01	25	5399	5227	3/16/17	3/24/17	Scaffold	SC	SAMEA2259712	GCA_900133005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/005/GCA_900133005.1_11893_6_62	-	907
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.92034	64.1	-	FVGN01	16	4899	4739	3/10/17	3/18/17	Scaffold	SC	SAMEA2259673	GCA_900133015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/015/GCA_900133015.1_11893_6_32	-	868
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.77926	31.1	-	CYQC01	439	1933	1672	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487041	GCA_001291865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/865/GCA_001291865.1_RC023_S5contigs.fa	-	RC023
Enterococcus faecium	1352	PRJEB13191	330638	Terrabacteria group	Firmicutes	3.1205	37.5	-	FXKU01	133	3235	2978	4/26/17	5/6/17	Scaffold	SC	SAMEA3916196	GCA_900180245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/245/GCA_900180245.1_19952_4_120	-	VREN3206
Vibrio parahaemolyticus	670	PRJNA350230	350230	Proteobacteria	Gammaproteobacteria	5.05637	45.2	-	MOSB01	57	4866	4645	12/9/16	3/20/17	Scaffold	Guangdong CDC	SAMN05935528	GCA_001895685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/685/GCA_001895685.1_ASM189568v1	-	100144
Klebsiella pneumoniae subsp. pneumoniae KPB-2	1413253	PRJNA225495	225495	Proteobacteria	Gammaproteobacteria	5.81435	57.1	-	AYOW01	135	5983	5711	5/21/14	2/21/17	Contig	University of Siena	SAMN02384894	GCA_000695305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/305/GCA_000695305.2_SbK60	24841267	KPB-2
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.33639	29	-	FULU01	50	4168	3955	2/14/17	2/23/17	Contig	SC	SAMEA3375093	GCA_900164045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/045/GCA_900164045.1_16780_8_27	-	VRECD0137
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.45011	50.9	-	LXVQ01	635	4954	4118	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440944	GCA_001688995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/688/995/GCA_001688995.1_ASM168899v1	28028547	CDPH_C20
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05333	41.2	-	CDSN01	52	2044	1943	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233755	GCA_000938475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/475/GCA_000938475.1_Velvet_assembly	-	0Z-D
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.08373	35.5	-	FJTP01	154	2124	2008	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888237	GCA_900074315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/315/GCA_900074315.1_VSA85	-	-
Acinetobacter baumannii 44298_6	1311083	PRJNA195164	195164	Proteobacteria	Gammaproteobacteria	4.09698	39.1	-	JICY01	130	4097	3799	4/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646377	GCA_000627555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/555/GCA_000627555.1_ASM62755v1	-	44298_6
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.47361	66.3	-	CTDH01	76	6150	5995	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3294416	GCA_001373735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/735/GCA_001373735.1_239_10Pc_1_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12455	51.8	-	FFDZ01	81	2476	2128	2/9/16	3/21/17	Scaffold	SC	SAMEA2674291	GCA_900036275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/275/GCA_900036275.1_14555_6_69	-	2842STDY5881506
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05381	39.5	-	COAA02	150	2239	2030	3/22/15	3/5/17	Contig	SC	SAMEA1463075	GCA_001114905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/905/GCA_001114905.2_7553_5_91	-	PT8085
Escherichia coli SWW33	1235805	PRJNA176006	176006	Proteobacteria	Gammaproteobacteria	4.8814	50.6	-	AQFX01	11	4946	4641	4/8/13	2/22/17	Scaffold	Broad Institute	SAMN01731010	GCA_000364305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/305/GCA_000364305.1_Esch_coli_SWW33_V1	-	SWW33
Mycobacterium tuberculosis TKK-01-0082	1324289	PRJNA198177	198177	Terrabacteria group	Actinobacteria	4.4131	65.5	-	JLWR01	3	4302	4104	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053812	GCA_000661615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/615/GCA_000661615.1_Myco_tube_TKK-01-0082_V1	-	TKK-01-0082
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.84415	38.1	-	MDQY01	14	2871	2783	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410760	GCA_001710115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/115/GCA_001710115.1_ASM171011v1	-	A51
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.64939	30.5	-	MOTX01	71	1766	1641	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN05163888	GCA_001878625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/625/GCA_001878625.1_ASM187862v1	-	CDPHFDLB-F15M01873-C
Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191	573395	PRJNA193529	193529	Proteobacteria	Gammaproteobacteria	4.82938	52.2	-	APWL01	4	4882	4622	4/4/13	5/19/17	Contig	Illinois Institute of Technology	SAMN02415238	GCA_000353585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/585/GCA_000353585.1_S._enterica_Tennessee_CDC07-0191	23704182	CDC07-0191
Staphylococcus aureus SJUD6040	1409534	PRJNA223854	223854	Terrabacteria group	Firmicutes	2.90871	32.7	-	JBPR01	15	3060	2894	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381595	GCA_000540415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/415/GCA_000540415.1_Stap_aure_SJUD6040_V1	-	SJUD6040
Staphylococcus aureus SJUD6028	1409535	PRJNA223855	223855	Terrabacteria group	Firmicutes	2.89203	32.9	-	JBPQ01	14	3036	2873	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381596	GCA_000540435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/435/GCA_000540435.1_Stap_aure_SJUD6028_V1	-	SJUD6028
"Salmonella enterica subsp. houtenae serovar 16:z4,z32:-- str. RKS3027"	1240348	PRJNA176876	176876	Proteobacteria	Gammaproteobacteria	4.40414	51.7	-	ANHR01	97	4378	4074	4/22/13	2/26/17	Contig	Harbin Medical University	SAMN02415237	GCA_000376525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/376/525/GCA_000376525.1_W41	-	RKS3027
Campylobacter jejuni	197	PRJNA309864	309864	Proteobacteria	delta/epsilon subdivisions	1.6915	30.3	-	MPBJ01	27	1806	1688	11/14/16	3/20/17	Contig	US Food and Drug Administration	SAMN05163892	GCA_001878635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/635/GCA_001878635.1_ASM187863v1	-	CDPHFDLB-F15M03174-C1
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.90243	37.9	-	MDRA01	14	2945	2871	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410778	GCA_001710135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/135/GCA_001710135.1_ASM171013v1	-	A502
Mycobacterium tuberculosis TKK-01-0083	1324290	PRJNA198178	198178	Terrabacteria group	Actinobacteria	4.41092	65.6	-	JLWQ01	5	4289	4114	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053813	GCA_000661635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/635/GCA_000661635.1_Myco_tube_TKK-01-0083_V1	-	TKK-01-0083
Escherichia coli KTE33	1169351	PRJNA157621	157621	Proteobacteria	Gammaproteobacteria	4.58291	50.6	-	ASQM01	24	4636	4260	5/16/13	2/22/17	Scaffold	Broad Institute	SAMN00847669	GCA_000398885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/398/885/GCA_000398885.1_Esch_coli_KTE33_V1	-	KTE33
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.11459	39.7	-	CLZP01	50	2267	1978	3/21/15	3/11/17	Contig	SC	SAMEA1028625	GCA_001114965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/965/GCA_001114965.1_6983_8_89	-	SMRU2393
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.18189	51.5	-	FEQW01	91	2542	2168	2/9/16	3/21/17	Scaffold	SC	SAMEA2673818	GCA_900036615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/615/GCA_900036615.1_14355_4_16	-	2842STDY5880973
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48994	66.3	-	CTDI01	76	6170	6013	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3294417	GCA_001373755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/755/GCA_001373755.1_240_10Pc_9_contigs_500	-	-
Acinetobacter baumannii 44298_7	1311084	PRJNA195165	195165	Proteobacteria	Gammaproteobacteria	4.00004	38.9	-	JICX01	153	4013	3712	4/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646378	GCA_000627575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/575/GCA_000627575.1_ASM62757v1	-	44298_7
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.08621	35.4	-	FJTD01	157	2130	2015	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888239	GCA_900074325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/325/GCA_900074325.1_VSA87	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05255	41.2	-	CDTC01	51	2042	1944	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233781	GCA_000938595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/595/GCA_000938595.1_Velvet_assembly	-	B34E
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.52433	50.9	-	LXVM01	424	4893	4314	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440948	GCA_001689005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/005/GCA_001689005.1_ASM168900v1	28028547	CDPH_C24
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.24882	28.8	-	FUMK01	44	3996	3807	2/14/17	2/23/17	Contig	SC	SAMEA3375119	GCA_900164095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/095/GCA_900164095.1_16780_8_53	-	VRECD0165
Klebsiella pneumoniae 4541-2	1455603	PRJNA236581	236581	Proteobacteria	Gammaproteobacteria	5.70545	57	-	JDWO01	145	5878	5547	6/9/14	2/21/17	Contig	Institute for Genome Sciences	SAMN02640650	GCA_000699325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/325/GCA_000699325.1_4541-2	24914121	4541-2
Vibrio parahaemolyticus	670	PRJNA350230	350230	Proteobacteria	Gammaproteobacteria	5.07927	45.3	-	MOSC01	46	4857	4665	12/9/16	3/20/17	Scaffold	Guangdong CDC	SAMN05935529	GCA_001895695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/695/GCA_001895695.1_ASM189569v1	-	100145
Enterococcus faecium	1352	PRJEB13191	330638	Terrabacteria group	Firmicutes	2.9437	37.9	-	FXKT01	161	3074	2842	4/26/17	5/6/17	Scaffold	SC	SAMEA3916226	GCA_900180265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/265/GCA_900180265.1_19952_4_150	-	VREN3641
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.7997	31	-	CYQN01	100	1882	1719	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487053	GCA_001291885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/885/GCA_001291885.1_RC127_S17contigs.fa	-	RC127
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.84631	64.2	-	FVGM01	10	4864	4722	3/10/17	3/18/17	Scaffold	SC	SAMEA2259690	GCA_900133025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/025/GCA_900133025.1_11893_6_47	-	885
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.38837	64.1	-	FVGO01	28	5472	5267	3/10/17	3/18/17	Scaffold	SC	SAMEA2259713	GCA_900133035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/035/GCA_900133035.1_11893_6_63	-	908
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.80259	31	-	CYQX01	166	1878	1719	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487064	GCA_001291905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/905/GCA_001291905.1_RC269_S28contigs.fa	-	RC269
Enterococcus faecium	1352	PRJEB13191	330638	Terrabacteria group	Firmicutes	2.96061	37.7	-	FXKY01	154	3095	2854	4/26/17	5/6/17	Scaffold	SC	SAMEA3916192	GCA_900180275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/275/GCA_900180275.1_19952_4_116	-	VREN2849
Vibrio parahaemolyticus	670	PRJNA350230	350230	Proteobacteria	Gammaproteobacteria	5.04513	45.3	-	MORZ01	33	4864	4654	12/9/16	3/20/17	Scaffold	Guangdong CDC	SAMN05935526	GCA_001895705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/705/GCA_001895705.1_ASM189570v1	-	100142
Klebsiella pneumoniae 11227-1	1455604	PRJNA236582	236582	Proteobacteria	Gammaproteobacteria	5.58038	57.3	-	JDWN01	90	5673	5340	6/9/14	2/21/17	Contig	Institute for Genome Sciences	SAMN02640651	GCA_000699345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/345/GCA_000699345.1_11227-1	24914121	11227-1
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.28266	28.9	-	FUME01	33	4020	3834	2/14/17	2/23/17	Contig	SC	SAMEA3375098	GCA_900164115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/115/GCA_900164115.1_16780_8_32	-	VRECD0142
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.50321	50.8	-	LXVL01	418	4961	4261	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440949	GCA_001689015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/015/GCA_001689015.1_ASM168901v1	28028547	CDPH_C25
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.10794	41.2	-	CDVF01	56	2128	2029	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233765	GCA_000938615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/615/GCA_000938615.1_Velvet_assembly	-	B22X
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.07188	35.5	-	FJTE01	176	2107	1999	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888238	GCA_900074335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/335/GCA_900074335.1_VSA86	-	-
Acinetobacter baumannii 44298_9	1311086	PRJNA195167	195167	Proteobacteria	Gammaproteobacteria	4.02461	39.2	-	JICW01	101	3986	3702	4/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646380	GCA_000627595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/595/GCA_000627595.1_ASM62759v1	-	44298_9
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48919	66.3	-	CTDK01	75	6170	6009	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3294418	GCA_001373775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/775/GCA_001373775.1_241_12_5Pc_6_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16823	51.5	-	FEPH01	71	2523	2155	2/9/16	3/21/17	Scaffold	SC	SAMEA2673783	GCA_900036695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/695/GCA_900036695.1_14355_4_6	-	2842STDY5880963
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07468	39.6	-	COBI02	125	2274	2063	3/23/15	3/11/17	Contig	SC	SAMEA1463292	GCA_001115065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/065/GCA_001115065.2_7622_2_41	-	BR1114
Escherichia coli KTE1	1169315	PRJNA157549	157549	Proteobacteria	Gammaproteobacteria	5.3148	50.7	-	ASTN01	15	5503	5187	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00847633	GCA_000407665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/665/GCA_000407665.1_Esch_coli_KTE1_V1	-	KTE1
Mycobacterium tuberculosis TKK-01-0084	1324291	PRJNA198179	198179	Terrabacteria group	Actinobacteria	4.42419	65.6	-	JLWP01	6	4296	4118	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053814	GCA_000661655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/655/GCA_000661655.1_Myco_tube_TKK-01-0084_V1	-	TKK-01-0084
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.9459	37.8	-	MDQV01	14	3010	2938	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410827	GCA_001710165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/165/GCA_001710165.1_ASM171016v1	-	A520
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.77964	30.1	-	MKEV01	141	1883	1703	12/21/16	3/21/17	Contig	University of California at Davis	SAMN04532394	GCA_001912825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/825/GCA_001912825.1_ASM191282v1	-	BCW_6887
Salmonella enterica subsp. enterica serovar Agona str. 62.H.72	1265666	PRJEB1124	189622	Proteobacteria	Gammaproteobacteria	4.73475	52	-	CARM01	195	4792	4565	2/15/13	2/26/17	Contig	ERI	SAMEA2272262	GCA_000389355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/355/GCA_000389355.1_62.H.72	23637636	62.H.72
Staphylococcus aureus SJUD6021	1409536	PRJNA223856	223856	Terrabacteria group	Firmicutes	2.92793	32.9	-	JBPP01	36	3092	2915	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381597	GCA_000540455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/455/GCA_000540455.1_Stap_aure_SJUD6021_V1	-	SJUD6021
Staphylococcus aureus LPIH6011	1409537	PRJNA223857	223857	Terrabacteria group	Firmicutes	2.92988	32.7	-	JBPO01	13	3092	2929	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381598	GCA_000540475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/475/GCA_000540475.1_Stap_aure_LPIH6011_V1	-	LPIH6011
Salmonella enterica subsp. enterica serovar Agona str. 63.H.87	1265619	PRJEB1125	189592	Proteobacteria	Gammaproteobacteria	4.84149	52	-	CARL01	265	4949	4678	2/15/13	2/26/17	Contig	ERI	SAMEA2272442	GCA_000389375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/375/GCA_000389375.1_63.H.87	23637636	63.H.87
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.80075	30.1	-	MKES01	80	1868	1731	12/21/16	3/22/17	Contig	University of California at Davis	SAMN04532341	GCA_001912835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/835/GCA_001912835.1_ASM191283v1	-	BCW_5913
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.74409	37.8	-	MDQU01	15	2798	2743	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410774	GCA_001710185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/185/GCA_001710185.1_ASM171018v1	-	A520-2
Mycobacterium tuberculosis TKK-01-0085	1324292	PRJNA198180	198180	Terrabacteria group	Actinobacteria	4.36255	65.6	-	JLWO01	5	4246	4087	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053815	GCA_000661675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/675/GCA_000661675.1_Myco_tube_TKK-01-0085_V1	-	TKK-01-0085
Escherichia coli KTE3	1169316	PRJNA157551	157551	Proteobacteria	Gammaproteobacteria	5.17158	50.6	-	ASTO01	8	5369	5020	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00847634	GCA_000407685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/685/GCA_000407685.1_Esch_coli_KTE3_V1	-	KTE3
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.1008	39.6	-	COED02	149	2284	2070	3/23/15	3/11/17	Contig	SC	SAMEA1463185	GCA_001115085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/085/GCA_001115085.2_7622_4_40	-	LE4142
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16118	51.5	-	FEPQ01	85	2527	2170	2/9/16	3/21/17	Scaffold	SC	SAMEA2674375	GCA_900036705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/705/GCA_900036705.1_14324_5_38	-	2842STDY5881571
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48699	66.3	-	CTDJ01	81	6165	6014	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3294419	GCA_001373795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/795/GCA_001373795.1_242_15Pc_5_contigs_500	-	-
Acinetobacter baumannii 44298_10	1311087	PRJNA195168	195168	Proteobacteria	Gammaproteobacteria	3.96753	39.2	-	JICV01	95	3928	3667	4/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646371	GCA_000627615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/615/GCA_000627615.1_ASM62761v1	-	44298_10
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.13069	35.3	-	FJTY01	134	2174	2054	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888241	GCA_900074345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/345/GCA_900074345.1_VSA89	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.0645	41.1	-	CEBA01	57	2056	1958	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234115	GCA_000938635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/635/GCA_000938635.1_Velvet_assembly	-	V36H
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.50233	50.8	-	LXVI01	414	4985	4264	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440952	GCA_001689085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/085/GCA_001689085.1_ASM168908v1	28028547	CDPH_C28
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.20767	28.4	-	FULZ01	32	3930	3781	2/14/17	2/23/17	Contig	SC	SAMEA3375087	GCA_900164175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/175/GCA_900164175.1_16780_8_21	-	VRECD0131
Klebsiella pneumoniae 4006	1455602	PRJNA236578	236578	Proteobacteria	Gammaproteobacteria	5.56393	57.3	-	JDWP01	65	5676	5433	6/9/14	2/21/17	Contig	Institute for Genome Sciences	SAMN02640649	GCA_000699405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/405/GCA_000699405.1_4006	24914121	4006
Vibrio parahaemolyticus	670	PRJNA350230	350230	Proteobacteria	Gammaproteobacteria	5.05496	45.3	-	MOSD01	58	4881	4660	12/9/16	3/20/17	Scaffold	Guangdong CDC	SAMN05935530	GCA_001895745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/745/GCA_001895745.1_ASM189574v1	-	100146
Enterococcus faecium	1352	PRJEB13191	330638	Terrabacteria group	Firmicutes	2.94206	37.9	-	FXKX01	169	3066	2847	4/26/17	5/6/17	Scaffold	SC	SAMEA3916084	GCA_900180285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/285/GCA_900180285.1_19952_4_8	-	VREN3651
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.79344	31.1	-	CYQD01	135	1884	1739	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487043	GCA_001291985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/985/GCA_001291985.1_RC037_S7contigs.fa	-	RC037
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.66146	63.8	-	FVGW01	70	5888	5593	3/10/17	3/18/17	Scaffold	SC	SAMEA2259716	GCA_900133065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/065/GCA_900133065.1_11893_6_66	-	911
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.08385	64.1	-	FVGP01	25	5096	4961	3/10/17	3/18/17	Scaffold	SC	SAMEA2259715	GCA_900133075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/075/GCA_900133075.1_11893_6_65	-	910
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.72226	31.3	-	CYQB01	107	1793	1687	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487042	GCA_001292005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/005/GCA_001292005.1_RC026_S6contigs.fa	-	RC026
Enterococcus faecium	1352	PRJEB13191	330638	Terrabacteria group	Firmicutes	2.84331	38	-	FXLD01	153	2954	2730	4/26/17	5/6/17	Scaffold	SC	SAMEA3916083	GCA_900180295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/295/GCA_900180295.1_19952_4_7	-	VREN3638
Vibrio parahaemolyticus	670	PRJNA357546	357546	Proteobacteria	Gammaproteobacteria	5.2342	45.2	-	MSEB01	85	5002	4775	12/21/16	3/28/17	Scaffold	Guangdong Institute of Microbiology	SAMN06143023	GCA_001913695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/695/GCA_001913695.1_ASM191369v1	-	GIMxtf283-2012.12
Klebsiella pneumoniae 7699	1455605	PRJNA236583	236583	Proteobacteria	Gammaproteobacteria	5.67694	57.3	-	JDWM01	148	5813	5506	6/9/14	2/21/17	Contig	Institute for Genome Sciences	SAMN02640652	GCA_000699425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/425/GCA_000699425.1_7699	24914121	7699
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.31707	28.9	-	FUNG01	54	4057	3875	2/14/17	2/23/17	Contig	SC	SAMEA3374974	GCA_900164575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/575/GCA_900164575.1_16852_2_2	-	VRECD0009
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.50295	50.9	-	LXVH01	434	5020	4259	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440953	GCA_001689095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/095/GCA_001689095.1_ASM168909v1	28028547	CDPH_C29
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.17675	40.9	-	CEBP01	81	2160	2031	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234049	GCA_000938655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/655/GCA_000938655.1_Velvet_assembly	-	S3B
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.13074	35.3	-	FJSW01	128	2172	2051	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888243	GCA_900074355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/355/GCA_900074355.1_VSA91	-	-
Acinetobacter baumannii 25569_8	1311115	PRJNA195237	195237	Proteobacteria	Gammaproteobacteria	3.93365	39	-	JICU01	66	3807	3590	4/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02649521	GCA_000627635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/635/GCA_000627635.1_ASM62763v1	-	25569_8
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48642	66.3	-	CUXI01	80	6168	6012	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3294420	GCA_001373815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/815/GCA_001373815.1_243_15_121C_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16697	51.5	-	FETF01	78	2515	2165	2/9/16	3/21/17	Scaffold	SC	SAMEA2673949	GCA_900036715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/715/GCA_900036715.1_14355_5_56	-	2842STDY5881109
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.13716	39.6	-	CKPI01	94	2388	2129	3/21/15	3/11/17	Contig	SC	SAMEA1024908	GCA_001115125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/125/GCA_001115125.1_6680_4_8	-	21
Escherichia coli KTE7	1169317	PRJNA157553	157553	Proteobacteria	Gammaproteobacteria	5.28855	50.6	-	ASTP01	10	5558	5217	5/31/13	2/22/17	Scaffold	Broad Institute	SAMN00847635	GCA_000407705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/705/GCA_000407705.1_Esch_coli_KTE7_V1	-	KTE7
Mycobacterium tuberculosis TKK-01-0086	1324293	PRJNA198181	198181	Terrabacteria group	Actinobacteria	4.41182	65.6	-	JLWN01	6	4289	4118	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053816	GCA_000661695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/695/GCA_000661695.1_Myco_tube_TKK-01-0086_V1	-	TKK-01-0086
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.83429	37.9	-	MDQW01	12	2861	2786	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410823	GCA_001710205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/205/GCA_001710205.1_ASM171020v1	-	A52
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.70412	30.5	-	MKEU01	37	1777	1645	12/21/16	3/21/17	Contig	University of California at Davis	SAMN04532405	GCA_001912845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/845/GCA_001912845.1_ASM191284v1	-	BCW_6902
Salmonella enterica subsp. enterica serovar Paratyphi A str. GZ9A00052	1072569	PRJNA71169	71169	Proteobacteria	Gammaproteobacteria	4.55351	52.2	-	AFYW01	30	4658	4303	6/17/13	2/26/17	Contig	"State Key Laboratory for Infectious Disease Prevention and Control, and National Institute for Communicable Disease Control and Prevention, ChineseCenter for Disease Control and Prevention"	SAMN02415251	GCA_000411795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/795/GCA_000411795.1_ASM41179v1	23028950	GZ9A00052
Staphylococcus aureus SCLE6010	1409538	PRJNA223858	223858	Terrabacteria group	Firmicutes	2.92489	32.9	-	JBPN01	32	3091	2906	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381599	GCA_000540495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/495/GCA_000540495.1_Stap_aure_SCLE6010_V1	-	SCLE6010
Staphylococcus aureus SJUD6041	1409539	PRJNA223859	223859	Terrabacteria group	Firmicutes	2.97112	32.8	-	JBPM01	29	3129	2945	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381600	GCA_000540515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/515/GCA_000540515.1_Stap_aure_SJUD6041_V1	-	SJUD6041
Salmonella enterica subsp. enterica serovar Paratyphi A str. GXS2268	1072568	PRJNA71167	71167	Proteobacteria	Gammaproteobacteria	4.51728	52.2	-	AFYX01	25	4623	4215	6/17/13	2/26/17	Contig	"State Key Laboratory for Infectious Disease Prevention and Control, and National Institute for Communicable Disease Control and Prevention, ChineseCenter for Disease Control and Prevention"	SAMN02415252	GCA_000411815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/815/GCA_000411815.1_ASM41181v1	23028950	GXS2268
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.86154	30	-	MKEW01	111	1996	1825	12/21/16	3/21/17	Contig	University of California at Davis	SAMN04532391	GCA_001912855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/855/GCA_001912855.1_ASM191285v1	-	BCW_6884
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.9776	37.9	-	MDQT01	32	3042	2958	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410807	GCA_001710215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/215/GCA_001710215.1_ASM171021v1	-	A520-4
Mycobacterium tuberculosis TKK-01-0087	1324294	PRJNA198182	198182	Terrabacteria group	Actinobacteria	4.43289	65.5	-	JLWM01	5	4302	4121	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053817	GCA_000661715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/715/GCA_000661715.1_Myco_tube_TKK-01-0087_V1	-	TKK-01-0087
Escherichia coli KTE13	1169318	PRJNA157555	157555	Proteobacteria	Gammaproteobacteria	5.01254	50.8	-	ASTQ01	9	5164	4820	5/31/13	2/22/17	Scaffold	Broad Institute	SAMN00847636	GCA_000407725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/725/GCA_000407725.1_Esch_coli_KTE13_V1	-	KTE13
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11252	39.7	-	CKAU01	49	2267	2015	3/21/15	3/11/17	Contig	SC	SAMEA974704	GCA_001115145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/145/GCA_001115145.1_6259_7_1	-	type strain: N
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16591	51.5	-	FEVV01	75	2524	2149	2/9/16	3/21/17	Scaffold	SC	SAMEA2674094	GCA_900036725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/725/GCA_900036725.1_14324_4_42	-	2842STDY5881287
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48533	66.3	-	CUXK01	82	6170	6012	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3294421	GCA_001373835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/835/GCA_001373835.1_244_15_311Ga_contigs_500	-	-
Acinetobacter baumannii 25569_9	1311116	PRJNA195238	195238	Proteobacteria	Gammaproteobacteria	3.96607	39	-	JICT01	68	3810	3578	4/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02649522	GCA_000627655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/655/GCA_000627655.1_ASM62765v1	-	25569_9
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.08539	35.4	-	FJSY01	149	2122	2010	9/30/16	3/21/17	Contig	INSTITUT PASTEUR	SAMEA3888242	GCA_900074365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/365/GCA_900074365.1_VSA90	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05204	41.1	-	CECG01	55	2040	1944	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234101	GCA_000938755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/755/GCA_000938755.1_Velvet_assembly	-	S9J
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.49829	50.9	-	LXVD01	439	4935	4241	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440976	GCA_001689105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/105/GCA_001689105.1_ASM168910v1	28028547	CDPH_C92
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.2562	28.6	-	FUNO01	27	3985	3812	2/14/17	2/23/17	Contig	SC	SAMEA3374986	GCA_900164655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/655/GCA_900164655.1_16852_2_14	-	VRECD0005
Klebsiella pneumoniae 160_1080	1304917	PRJNA232458	232458	Proteobacteria	Gammaproteobacteria	5.49579	57.3	-	JMMY01	4	5591	5194	6/16/14	2/21/17	Contig	JCVI	SAMN02141989	GCA_000709165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/165/GCA_000709165.1_1601080v01	-	160_1080
Vibrio parahaemolyticus	670	PRJNA345098	345098	Proteobacteria	Gammaproteobacteria	5.09728	45.3	-	MKQF01	27	4919	4687	3/6/17	3/9/17	Scaffold	Universidad Autonoma de Chile	SAMN05858272	GCA_002018565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/565/GCA_002018565.1_ASM201856v1	-	PMC53.7
Enterococcus faecium	1352	PRJEB13191	330638	Terrabacteria group	Firmicutes	2.94232	37.9	-	FXLB01	150	3063	2844	4/26/17	5/6/17	Scaffold	SC	SAMEA3916085	GCA_900180305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/305/GCA_900180305.1_19952_4_9	-	VREN3735
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.80297	31.1	-	CYQK01	103	1865	1737	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487050	GCA_001292065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/065/GCA_001292065.1_RC106_S14contigs.fa	-	RC106
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.32073	64.1	-	FVHH01	37	5414	5221	3/10/17	3/18/17	Scaffold	SC	SAMEA2259722	GCA_900133085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/085/GCA_900133085.1_11893_6_69	-	917
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.00074	64.2	-	FVGQ01	22	5007	4862	3/10/17	3/18/17	Scaffold	SC	SAMEA2259721	GCA_900133095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/095/GCA_900133095.1_11893_6_68	-	916
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.77491	31.1	-	CYRM01	100	1829	1715	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487078	GCA_001292085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/085/GCA_001292085.1_RC430_S42contigs.fa	-	RC430
Enterococcus faecium	1352	PRJEB13191	330638	Terrabacteria group	Firmicutes	3.04657	37.6	-	FXLC01	179	3173	2917	4/26/17	5/6/17	Scaffold	SC	SAMEA3916223	GCA_900180325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/325/GCA_900180325.1_19952_4_147	-	VREN3289
Vibrio parahaemolyticus	670	PRJNA345101	345101	Proteobacteria	Gammaproteobacteria	5.13164	45.3	-	MKQY01	25	4985	4737	3/6/17	3/9/17	Scaffold	Universidad Autonoma de Chile	SAMN05858275	GCA_002018635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/635/GCA_002018635.1_ASM201863v1	-	PMA11.14
Klebsiella pneumoniae VAKPC278	1284827	PRJNA232458	232458	Proteobacteria	Gammaproteobacteria	5.48181	57.2	-	JMSW01	4	5584	5182	6/16/14	2/21/17	Contig	JCVI	SAMN02142048	GCA_000709185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/185/GCA_000709185.1_VAKP278v01	-	VAKPC278
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.09616	28.3	-	FUPC01	28	3794	3655	2/14/17	2/23/17	Contig	SC	SAMEA3375070	GCA_900165055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/055/GCA_900165055.1_16780_8_4	-	VRECD0115
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.50629	50.8	-	LXVV01	454	5028	4254	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440931	GCA_001689145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/145/GCA_001689145.1_ASM168914v1	28028547	CDPH_C7
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05885	41.1	-	CECO01	59	2048	1952	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234116	GCA_000938775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/775/GCA_000938775.1_Velvet_assembly	-	V36M
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.12166	35.4	-	FJTK01	148	2162	2042	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888240	GCA_900074375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/375/GCA_900074375.1_VSA88	-	-
Acinetobacter baumannii 25442_5	1311122	PRJNA195244	195244	Proteobacteria	Gammaproteobacteria	4.07842	39.1	-	JICS01	128	4052	3752	4/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02649421	GCA_000627675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/675/GCA_000627675.1_ASM62767v1	-	25442_5
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48877	66.3	-	CTDL01	84	6172	6008	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3294422	GCA_001373855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/855/GCA_001373855.1_245_Tsb_Pool_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.14131	51.8	-	FEPI01	68	2490	2145	2/9/16	3/21/17	Scaffold	SC	SAMEA2673787	GCA_900037235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/235/GCA_900037235.1_14355_4_7	-	2842STDY5880964
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.13268	39.5	-	CMLS01	51	2336	2123	3/22/15	3/10/17	Contig	SC	SAMEA1029320	GCA_001115205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/205/GCA_001115205.1_7054_6_15	-	SMRU3087
Escherichia coli KTE35	1169320	PRJNA157559	157559	Proteobacteria	Gammaproteobacteria	5.12379	50.7	-	ASTR01	18	5405	4914	5/31/13	2/22/17	Scaffold	Broad Institute	SAMN00847638	GCA_000407745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/745/GCA_000407745.1_Esch_coli_KTE35_V1	-	KTE35
Mycobacterium tuberculosis TKK-01-0088	1324295	PRJNA198183	198183	Terrabacteria group	Actinobacteria	4.41809	65.5	-	JLWL01	6	4303	4097	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053818	GCA_000661735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/735/GCA_000661735.1_Myco_tube_TKK-01-0088_V1	-	TKK-01-0088
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.90299	37.9	-	MDQS01	18	2937	2864	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410808	GCA_001710245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/245/GCA_001710245.1_ASM171024v1	-	A522
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.64343	30.6	-	MKFD01	26	1714	1585	12/21/16	3/21/17	Contig	University of California at Davis	SAMN04532292	GCA_001912915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/915/GCA_001912915.1_ASM191291v1	-	BCW_5158
Salmonella enterica subsp. enterica serovar Paratyphi A str. JX05-19	1072570	PRJNA71171	71171	Proteobacteria	Gammaproteobacteria	4.55226	52.2	-	AFYY01	27	4668	4298	6/17/13	2/26/17	Contig	"State Key Laboratory for Infectious Disease Prevention and Control, and National Institute for Communicable Disease Control and Prevention, ChineseCenter for Disease Control and Prevention"	SAMN02415253	GCA_000411835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/835/GCA_000411835.1_ASM41183v1	23028950	JX05-19
Staphylococcus aureus PLAC6004	1409542	PRJNA223862	223862	Terrabacteria group	Firmicutes	2.9464	32.8	-	JBPL01	18	3133	2965	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381603	GCA_000540535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/535/GCA_000540535.1_Stap_aure_PLAC6004_V1	-	PLAC6004
Staphylococcus aureus SCLE6011	1409543	PRJNA223863	223863	Terrabacteria group	Firmicutes	2.93557	32.8	-	JBPK01	14	3114	2951	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381604	GCA_000540555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/555/GCA_000540555.1_Stap_aure_SCLE6011_V1	-	SCLE6011
Salmonella enterica subsp. enterica serovar Paratyphi A str. YN09620	1072571	PRJNA71173	71173	Proteobacteria	Gammaproteobacteria	4.48689	52.2	-	AFYZ01	24	4568	4211	6/17/13	2/26/17	Contig	"State Key Laboratory for Infectious Disease Prevention and Control, and National Institute for Communicable Disease Control and Prevention, ChineseCenter for Disease Control and Prevention"	SAMN02415254	GCA_000411855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/855/GCA_000411855.1_ASM41185v1	23028950	YN09620
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.72241	30.4	-	MKFA01	67	1781	1626	12/21/16	3/21/17	Contig	University of California at Davis	SAMN04532289	GCA_001912925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/925/GCA_001912925.1_ASM191292v1	-	BCW_5155
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.97803	37.9	-	MDQR01	18	3062	2972	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410777	GCA_001710255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/255/GCA_001710255.1_ASM171025v1	-	A527
Mycobacterium tuberculosis TKK-01-0089	1324296	PRJNA198184	198184	Terrabacteria group	Actinobacteria	4.44639	65.4	-	JLWK01	4	4302	4114	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053819	GCA_000661755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/755/GCA_000661755.1_Myco_tube_TKK-01-0089_V1	-	TKK-01-0089
Escherichia coli KTE231	1169323	PRJNA157565	157565	Proteobacteria	Gammaproteobacteria	5.22897	50.5	-	ASTT01	11	5401	5099	5/31/13	2/22/17	Scaffold	Broad Institute	SAMN00847641	GCA_000407785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/785/GCA_000407785.1_Esch_coli_KTE231_V1	-	KTE231
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.20806	39.7	-	CMGD01	79	2366	2061	3/23/15	3/11/17	Contig	SC	SAMEA1029214	GCA_001115245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/245/GCA_001115245.1_7038_4_16	-	SMRU2944
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.19823	51.6	-	FERW01	72	2569	2220	2/9/16	3/21/17	Scaffold	SC	SAMEA2674016	GCA_900037245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/245/GCA_900037245.1_14355_4_78	-	2842STDY5881035
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48842	66.3	-	CTDM01	74	6169	6012	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3294423	GCA_001373875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/875/GCA_001373875.1_246_Rw30_contigs_500	-	-
Acinetobacter baumannii 25442_7	1311124	PRJNA195248	195248	Proteobacteria	Gammaproteobacteria	4.1627	39.2	-	JICR01	138	4147	3881	4/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02649422	GCA_000627695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/695/GCA_000627695.1_ASM62769v1	-	25442_7
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.12928	35.4	-	FJTA01	140	2169	2041	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888245	GCA_900074385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/385/GCA_900074385.1_VSA93	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05341	41.2	-	CDSK01	53	2046	1950	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233753	GCA_000938815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/815/GCA_000938815.1_Velvet_assembly	-	0Z-B
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.40398	50.9	-	LXVO01	393	4737	4178	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440946	GCA_001689185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/185/GCA_001689185.1_ASM168918v1	28028547	CDPH_C22
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.52383	28.5	-	FURH01	29	4329	4124	2/14/17	2/23/17	Contig	SC	SAMEA3375004	GCA_900165625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/625/GCA_900165625.1_16852_2_32	-	VRECD0033
Klebsiella pneumoniae UHKPC45	1284819	PRJNA232458	232458	Proteobacteria	Gammaproteobacteria	5.76397	57	-	JMSX01	5	5911	5395	6/16/14	2/21/17	Contig	JCVI	SAMN02142016	GCA_000709205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/205/GCA_000709205.1_UHKPC45v01	-	UHKPC45
Vibrio parahaemolyticus	670	PRJNA345100	345100	Proteobacteria	Gammaproteobacteria	5.1325	45.3	-	MKQX01	28	4996	4752	3/6/17	3/9/17	Scaffold	Universidad Autonoma de Chile	SAMN05858274	GCA_002018645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/645/GCA_002018645.1_ASM201864v1	-	PMA54.13
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.18497	37.4	-	FXLS01	212	3300	3084	4/26/17	5/6/17	Scaffold	SC	SAMEA3893592	GCA_900180455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/455/GCA_900180455.1_19789_6_76	-	VREN1806
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.79613	31	-	CYQI01	175	1911	1716	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487047	GCA_001292105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/105/GCA_001292105.1_RC096_S11contigs.fa	-	RC096
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.12784	64.1	-	FSCS01	15	5138	5025	12/14/16	3/21/17	Scaffold	SC	SAMEA2259723	GCA_900133115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/115/GCA_900133115.1_11893_6_70	-	918
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.85197	64.3	-	FSCQ01	17	4793	4651	12/14/16	3/21/17	Scaffold	SC	SAMEA2275643	GCA_900133125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/125/GCA_900133125.1_12082_5_53	-	921
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.79734	31.1	-	CYRG01	170	1892	1715	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487071	GCA_001292125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/125/GCA_001292125.1_RC289_S35contigs.fa	-	RC289
Enterococcus faecium	1352	PRJEB12937	336508	Terrabacteria group	Firmicutes	3.06437	37.6	-	FXLR01	164	3203	2923	4/26/17	5/6/17	Scaffold	SC	SAMEA3893631	GCA_900180465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/465/GCA_900180465.1_19789_6_166	-	VREN3286
Vibrio parahaemolyticus	670	PRJNA345106	345106	Proteobacteria	Gammaproteobacteria	5.14668	45.3	-	MKRD01	24	4972	4731	3/6/17	3/9/17	Scaffold	Universidad Autonoma de Chile	SAMN05858280	GCA_002018695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/695/GCA_002018695.1_ASM201869v1	-	PMA32.14
Klebsiella pneumoniae UHKPC 52	1284814	PRJNA232458	232458	Proteobacteria	Gammaproteobacteria	5.54157	57.3	-	JMSY01	4	5643	5372	6/16/14	2/21/17	Contig	JCVI	SAMN02142019	GCA_000709225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/225/GCA_000709225.1_UHKPC52v01	-	UHKPC 52
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.08647	28.5	-	FURX01	23	3809	3650	2/14/17	2/23/17	Contig	SC	SAMEA3375049	GCA_900165795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/795/GCA_900165795.1_16852_2_77	-	VRECD0093
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.5869	50.8	-	LXVN01	417	5058	4380	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440947	GCA_001689195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/195/GCA_001689195.1_ASM168919v1	28028547	CDPH_C23
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05344	41.1	-	CDST01	58	2038	1944	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233767	GCA_000938935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/935/GCA_000938935.1_Velvet_assembly	-	B23M
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.08233	35.5	-	FJSZ01	137	2118	2005	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888244	GCA_900074395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/395/GCA_900074395.1_VSA92	-	-
Acinetobacter baumannii 25442_9	1311126	PRJNA195251	195251	Proteobacteria	Gammaproteobacteria	4.10677	39.1	-	JICQ01	106	4099	3836	4/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02649423	GCA_000627715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/715/GCA_000627715.1_ASM62771v1	-	25442_9
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48985	66.3	-	CUXL01	76	6174	6015	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3294424	GCA_001373895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/895/GCA_001373895.1_247_Rw149_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12778	51.7	-	FETS01	87	2494	2161	2/9/16	3/19/17	Scaffold	SC	SAMEA2674048	GCA_900037255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/255/GCA_900037255.1_14355_5_93	-	2842STDY5881146
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.13605	39.6	-	CMER01	62	2328	2105	3/21/15	3/11/17	Contig	SC	SAMEA1028836	GCA_001115345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/345/GCA_001115345.1_7011_5_17	-	SMRU2801
Escherichia coli KTE14	1169333	PRJNA157585	157585	Proteobacteria	Gammaproteobacteria	5.41483	50.7	-	ASTU01	27	5627	5203	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00847651	GCA_000407805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/805/GCA_000407805.1_Esch_coli_KTE14_V1	-	KTE14
Mycobacterium tuberculosis TKK-01-0090	1324297	PRJNA198185	198185	Terrabacteria group	Actinobacteria	4.44476	65.4	-	JLWJ01	7	4314	4127	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053820	GCA_000661775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/775/GCA_000661775.1_Myco_tube_TKK-01-0090_V1	-	TKK-01-0090
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.90501	37.9	-	MDQN01	14	2950	2872	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410816	GCA_001710285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/285/GCA_001710285.1_ASM171028v1	-	A547
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.82474	30.4	-	MKFF01	54	1933	1761	12/21/16	3/21/17	Contig	University of California at Davis	SAMN04532294	GCA_001912985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/985/GCA_001912985.1_ASM191298v1	-	BCW_5160
Salmonella enterica subsp. enterica serovar Paratyphi A str. ZJ98-53	1072572	PRJNA71175	71175	Proteobacteria	Gammaproteobacteria	4.51628	52.2	-	AFZA01	24	4608	4212	6/17/13	2/26/17	Contig	"State Key Laboratory for Infectious Disease Prevention and Control, and National Institute for Communicable Disease Control and Prevention, ChineseCenter for Disease Control and Prevention"	SAMN02415255	GCA_000411875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/875/GCA_000411875.1_ASM41187v1	23028950	ZJ98-53
Staphylococcus aureus SMMC6011	1409545	PRJNA223865	223865	Terrabacteria group	Firmicutes	2.91516	32.9	-	JBPJ01	18	3065	2895	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381606	GCA_000540575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/575/GCA_000540575.1_Stap_aure_SMMC6011_V1	-	SMMC6011
Staphylococcus aureus UCIM6034	1409546	PRJNA223866	223866	Terrabacteria group	Firmicutes	2.93173	32.9	-	JBPI01	26	3092	2915	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381607	GCA_000540595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/595/GCA_000540595.1_Stap_aure_UCIM6034_V1	-	UCIM6034
Salmonella enterica subsp. enterica serovar Muenchen str. 08-1125	1328334	PRJNA198797	198797	Proteobacteria	Gammaproteobacteria	5.0765	52	-	ARYX01	113	5245	4916	6/20/13	2/26/17	Contig	Centers for Disease Control & Prevention	SAMN02415215	GCA_000412795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/795/GCA_000412795.1_08-1125_Ver1	-	08-1125
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.80229	30.3	-	MKET01	56	1907	1725	12/21/16	3/21/17	Contig	University of California at Davis	SAMN04532214	GCA_001912995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/995/GCA_001912995.1_ASM191299v1	-	BCW_4324
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.9364	37.9	-	MDRC01	24	2996	2922	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410758	GCA_001710295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/295/GCA_001710295.1_ASM171029v1	-	A47
Mycobacterium tuberculosis TKK-01-0091	1324298	PRJNA198186	198186	Terrabacteria group	Actinobacteria	4.39883	65.6	-	JLWI01	3	4270	4100	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053821	GCA_000661795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/795/GCA_000661795.1_Myco_tube_TKK-01-0091_V1	-	TKK-01-0091
Escherichia coli KTE19	1169338	PRJNA157595	157595	Proteobacteria	Gammaproteobacteria	5.07854	50.6	-	ASTV01	5	5141	4812	5/31/13	2/22/17	Scaffold	Broad Institute	SAMN00847656	GCA_000407825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/825/GCA_000407825.1_Esch_coli_KTE19_V1	-	KTE19
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.04587	39.8	-	CMWE01	54	2249	1948	3/22/15	3/10/17	Contig	SC	SAMEA1022823	GCA_001115405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/405/GCA_001115405.1_5756_7_4	-	312
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11719	51.7	-	FEUK01	88	2469	2157	2/9/16	3/19/17	Scaffold	SC	SAMEA2673893	GCA_900037265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/265/GCA_900037265.1_14355_6_48	-	2842STDY5881197
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48147	66.3	-	CTDN01	72	6155	6001	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3294425	GCA_001373915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/915/GCA_001373915.1_248_Rw198_contigs_500	-	-
Acinetobacter baumannii 42057_2	1311134	PRJNA195259	195259	Proteobacteria	Gammaproteobacteria	3.93087	38.9	-	JICP01	160	3887	3578	4/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02649523	GCA_000627735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/735/GCA_000627735.1_ASM62773v1	-	42057_2
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.11696	35.4	-	FJTI01	168	2163	2036	9/30/16	3/21/17	Contig	INSTITUT PASTEUR	SAMEA3888247	GCA_900074405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/405/GCA_900074405.1_VSA95	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.0702	41.2	-	CDUZ01	56	2064	1969	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233847	GCA_000939055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/055/GCA_000939055.1_Velvet_assembly	-	F2P
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.82956	50.8	-	LXVG01	490	5267	4649	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440972	GCA_001689215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/215/GCA_001689215.1_ASM168921v1	28028547	CDPH_C82
Clostridioides difficile	1496	PRJNA264745	264745	Terrabacteria group	Firmicutes	4.51334	29.1	-	JXBR01	63	4315	4132	1/26/15	3/16/17	Scaffold	Universidad de Costa Rica	SAMN03275181	GCA_000828225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/828/225/GCA_000828225.1_ASM82822v1	25653402	LIBA-5734
Klebsiella pneumoniae UHKPC05	1284790	PRJNA232458	232458	Proteobacteria	Gammaproteobacteria	5.66093	57.2	-	JNBM01	8	5781	5498	6/16/14	2/21/17	Contig	JCVI	SAMN02141987	GCA_000709245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/245/GCA_000709245.1_UHKPC05v01	-	UHKPC05
Vibrio parahaemolyticus	670	PRJNA345104	345104	Proteobacteria	Gammaproteobacteria	5.14041	45.3	-	MKRB01	25	4978	4735	3/6/17	3/9/17	Scaffold	Universidad Autonoma de Chile	SAMN05858278	GCA_002018705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/705/GCA_002018705.1_ASM201870v1	-	PMA21.14
Buchnera aphidicola (Cinara pseudotaxifoliae)	655384	PRJEB15506	354854	Proteobacteria	Gammaproteobacteria	0.455403	24.2272	chromosome 1:NZ_LT635893.1/LT635893.1; plasmid pLeu:NZ_LT635894.1/LT635894.1; plasmid pTrp:NZ_LT635895.1/LT635895.1	-	3	418	377	11/25/16	4/10/17	Complete Genome	Centre de Biologie pour la Gestion des Populations (CBGP - UMR1062)	SAMEA4556319	GCA_900128595.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/595/GCA_900128595.1_BCipseudotaxifoliae_v1.0	-	BCipseudotaxifoliae
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.79696	31	-	CYRO01	140	1866	1733	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487079	GCA_001292165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/165/GCA_001292165.1_RC415_S43contigs.fa	-	RC415
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98823	64	-	FVGR01	17	5030	4891	3/10/17	3/18/17	Scaffold	SC	SAMEA2275647	GCA_900133145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/145/GCA_900133145.1_12082_5_54	-	925
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.8695	64.2	-	FVGU01	5	4888	4770	3/10/17	3/18/17	Scaffold	SC	SAMEA2275646	GCA_900133155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/155/GCA_900133155.1_12163_1_3	-	924
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.7249	30.3	-	CYQA01	104	1819	1668	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487039	GCA_001292205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/205/GCA_001292205.1_RC013_S3contigs.fa	-	RC013
Candidatus Nanopusillus acidilobi	1577684	PRJNA266727	266727	DPANN group	Nanoarchaeota	0.605887	24.2	chromosome:CP010514.1	-	1	696	587	2/4/16	8/17/16	Complete Genome	Oak Ridge National Laboratory	SAMN03173949	GCA_001552015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/015/GCA_001552015.1_ASM155201v1	-	7A
Vibrio parahaemolyticus	670	PRJNA345102	345102	Proteobacteria	Gammaproteobacteria	5.24664	45.2	-	MKQZ01	24	5106	4833	3/6/17	3/9/17	Scaffold	Universidad Autonoma de Chile	SAMN05858276	GCA_002018735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/735/GCA_002018735.1_ASM201873v1	-	PMA12.14
Klebsiella pneumoniae	573	PRJNA241287	241287	Proteobacteria	Gammaproteobacteria	5.43244	57.2	-	JGYH01	133	5484	5231	6/18/14	2/21/17	Contig	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN02689125	GCA_000710075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/075/GCA_000710075.1_KlePne1.0	25279004	5422
Clostridioides difficile	1496	PRJNA255280	255280	Terrabacteria group	Firmicutes	4.23223	28.5	-	JPPA01	116	3938	3756	9/25/15	3/18/17	Scaffold	Institut Pasteur	SAMN02911833	GCA_001299495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/495/GCA_001299495.1_ASM129949v1	26446480	RA09-70
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.93996	50.6	-	LXVE01	470	5520	4688	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440975	GCA_001689225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/225/GCA_001689225.1_ASM168922v1	28028547	CDPH_C88
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.0593	41.1	-	CDSZ01	65	2057	1936	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233779	GCA_000939115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/115/GCA_000939115.1_Velvet_assembly	-	B33L
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.13016	35.3	-	FJTB01	126	2171	2051	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888250	GCA_900074415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/415/GCA_900074415.1_VSA98	-	-
Acinetobacter baumannii 42057_6	1311138	PRJNA195263	195263	Proteobacteria	Gammaproteobacteria	4.08045	39.1	-	JICO01	79	4027	3716	4/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02649525	GCA_000627755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/755/GCA_000627755.1_ASM62775v1	-	42057_6
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48689	66.3	-	CUXM01	75	6174	6018	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3294426	GCA_001373935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/935/GCA_001373935.1_249_2_5Pc_3_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16702	51.5	-	FEVW01	74	2524	2144	2/9/16	3/21/17	Scaffold	SC	SAMEA2674099	GCA_900037275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/275/GCA_900037275.1_14324_4_47	-	2842STDY5881292
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.04214	39.7	-	CRTQ01	59	2248	2033	3/23/15	3/11/17	Contig	SC	SAMEA1025277	GCA_001115425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/425/GCA_001115425.1_6805_4_4	-	SMRU1660
Escherichia coli KTE20	1169339	PRJNA157597	157597	Proteobacteria	Gammaproteobacteria	5.63642	50.5	-	ASTW01	24	5919	5482	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00847657	GCA_000407845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/845/GCA_000407845.1_Esch_coli_KTE20_V1	-	KTE20
Mycobacterium tuberculosis TKK-01-0092	1324299	PRJNA198187	198187	Terrabacteria group	Actinobacteria	4.41499	65.5	-	JLWH01	5	4294	4098	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053822	GCA_000661815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/815/GCA_000661815.1_Myco_tube_TKK-01-0092_V1	-	TKK-01-0092
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.95983	37.8	-	MDRD01	38	3017	2938	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410762	GCA_001710305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/305/GCA_001710305.1_ASM171030v1	-	A39
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.74132	30.4	-	MKEZ01	65	1806	1640	12/21/16	3/21/17	Contig	University of California at Davis	SAMN04532288	GCA_001913015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/015/GCA_001913015.1_ASM191301v1	-	BCW_5154
Salmonella enterica subsp. enterica serovar Muenchen str. 2009K-0951	1328333	PRJNA198796	198796	Proteobacteria	Gammaproteobacteria	5.19149	52.1	-	ARYW01	143	5439	5051	6/20/13	2/26/17	Contig	Centers for Disease Control & Prevention	SAMN02415214	GCA_000412815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/815/GCA_000412815.1_2009K-0951_Ver1	-	2009K-0951
Staphylococcus aureus MISS6027	1409547	PRJNA223867	223867	Terrabacteria group	Firmicutes	2.83143	32.8	-	JBPH01	34	2942	2773	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381608	GCA_000540615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/615/GCA_000540615.1_Stap_aure_MISS6027_V1	-	MISS6027
Staphylococcus aureus COAS6020	1409548	PRJNA223868	223868	Terrabacteria group	Firmicutes	2.73019	32.8	-	JBPG01	36	2846	2681	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381609	GCA_000540635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/635/GCA_000540635.1_Stap_aure_COAS6020_V1	-	COAS6020
Salmonella enterica subsp. enterica serovar Stanley str. 06-0538	1328332	PRJNA198795	198795	Proteobacteria	Gammaproteobacteria	4.72155	52.2	-	ARYV01	66	4828	4551	6/20/13	2/26/17	Contig	Centers for Disease Control & Prevention	SAMN02415213	GCA_000412835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/835/GCA_000412835.1_06-0538_Ver1	-	06-0538
Campylobacter jejuni subsp. jejuni	32022	PRJNA290425	290425	Proteobacteria	delta/epsilon subdivisions	1.62396	30.4	-	MLDJ01	20	1703	1610	4/26/17	5/1/17	Contig	University of Helsinki	SAMN05831995	GCA_002110605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/605/GCA_002110605.1_Cjejuni.CJ003CC21_v1.0	28408091	CJ003CC21
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.97576	37.9	-	MDRI01	20	3049	2968	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410790	GCA_001710325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/325/GCA_001710325.1_ASM171032v1	-	A20
Mycobacterium tuberculosis TKK-01-0093	1324300	PRJNA198188	198188	Terrabacteria group	Actinobacteria	4.45133	65.3	-	JLWG01	7	4311	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053823	GCA_000661835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/835/GCA_000661835.1_Myco_tube_TKK-01-0093_V1	-	TKK-01-0093
Escherichia coli KTE24	1169343	PRJNA157605	157605	Proteobacteria	Gammaproteobacteria	5.39934	50.5	-	ASTX01	14	5648	5134	5/31/13	2/22/17	Scaffold	Broad Institute	SAMN00847661	GCA_000407865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/865/GCA_000407865.1_Esch_coli_KTE24_V1	-	KTE24
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.03331	39.7	-	CNWH02	166	2195	1998	3/22/15	3/11/17	Contig	SC	SAMEA1032568	GCA_001115445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/445/GCA_001115445.2_7001_1_21	-	R34-3098
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16349	51.6	-	FEYT01	84	2513	2165	2/9/16	3/19/17	Scaffold	SC	SAMEA2674124	GCA_900037285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/285/GCA_900037285.1_14555_5_10	-	2842STDY5881351
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48806	66.3	-	CUXN01	84	6174	6011	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3294427	GCA_001373955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/955/GCA_001373955.1_249_Tsb_4_contigs_500	-	-
Acinetobacter baumannii 45052_4	1311144	PRJNA195269	195269	Proteobacteria	Gammaproteobacteria	3.98387	39.1	-	JICN01	65	3809	3550	4/11/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02649528	GCA_000627775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/775/GCA_000627775.1_ASM62777v1	-	45052_4
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.08293	35.5	-	FJTM01	141	2122	2012	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888249	GCA_900074425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/425/GCA_900074425.1_VSA97	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04772	41.2	-	CDVK01	58	2037	1940	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233867	GCA_000939315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/315/GCA_000939315.1_Velvet_assembly	-	F7L
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.54259	50.8	-	LXVC01	424	4957	4306	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440981	GCA_001689265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/265/GCA_001689265.1_ASM168926v1	28028547	CDPH_C101
Clostridioides difficile	1496	PRJNA260039	260039	Terrabacteria group	Firmicutes	4.31987	28.5	-	JRHM01	81	4018	3894	9/25/15	3/18/17	Scaffold	Institut Pasteur	SAMN03015183	GCA_001299615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/615/GCA_001299615.1_ASM129961v1	26446480	SA10-050
Klebsiella pneumoniae	573	PRJNA246374	246374	Proteobacteria	Gammaproteobacteria	5.43376	57.3	-	JNFE01	85	5431	5180	6/18/14	2/21/17	Contig	University of Michigan	SAMN02767132	GCA_000710095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/095/GCA_000710095.1_ASM71009v1	24994806	Top52 #1721
Vibrio parahaemolyticus	670	PRJNA345105	345105	Proteobacteria	Gammaproteobacteria	5.13244	45.3	-	MKRC01	22	4980	4733	3/6/17	3/9/17	Scaffold	Universidad Autonoma de Chile	SAMN05858279	GCA_002018775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/775/GCA_002018775.1_ASM201877v1	-	PMA31.14
Enterococcus faecium 13.SD.W.09	1259824	PRJNA179542	179542	Terrabacteria group	Firmicutes	3.872	42.3	-	ATID01	46	4029	3991	6/25/13	12/6/13	Scaffold	The Genome Institute	SAMN02436706	GCA_000414965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/965/GCA_000414965.1_ASM41496v1	-	13.SD.W.09
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.84173	31	-	CYQL01	174	1975	1731	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487051	GCA_001292225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/225/GCA_001292225.1_RC116_S15contigs.fa	-	RC116
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.13661	64.2	-	FVGV01	17	5168	5004	3/10/17	3/18/17	Scaffold	SC	SAMEA2275648	GCA_900133165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/165/GCA_900133165.1_12163_1_4	-	926
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.0608	64.1	-	FSCT01	15	5079	4970	12/14/16	3/21/17	Scaffold	SC	SAMEA2275814	GCA_900133175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/175/GCA_900133175.1_12082_5_71	-	1088
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.6216	30.4	-	CYRF01	97	1709	1598	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487072	GCA_001292265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/265/GCA_001292265.1_RC291_S36contigs.fa	-	RC291
Enterococcus faecium CRL1879	1295527	PRJNA191091	191091	Terrabacteria group	Firmicutes	2.88675	37.7	-	AOUK01	73	2920	2616	6/4/13	1/8/14	Contig	Centro de Referencia para Lactobacilos (CERELA)	SAMN02469460	GCA_000406365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/406/365/GCA_000406365.1_ASM40636v1	23868133	CRL1879
Vibrio parahaemolyticus	670	PRJNA357192	357192	Proteobacteria	Gammaproteobacteria	5.04336	45.3	-	MSAM01	73	4786	4583	5/22/17	5/24/17	Scaffold	Guangdong Institute of Microbiology	SAMN06134688	GCA_002153895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/895/GCA_002153895.1_ASM215389v1	-	Vp230
Klebsiella pneumoniae T2-1-2	1449985	PRJNA235246	235246	Proteobacteria	Gammaproteobacteria	5.41305	57.1	-	JAQM01	238	5454	5114	6/23/14	2/21/17	Contig	University of Malaya	SAMN02869887	GCA_000710805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/805/GCA_000710805.1_De_novo_Assembly	-	T2-1-2
Clostridioides difficile	1496	PRJNA260040	260040	Terrabacteria group	Firmicutes	4.27757	28.4	-	JRHN01	67	3979	3850	9/25/15	3/18/17	Scaffold	Institut Pasteur	SAMN03015184	GCA_001299635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/635/GCA_001299635.1_ASM129963v1	26446480	CD10-165
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.5281	50.9	-	LXVA01	417	5013	4268	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440983	GCA_001689285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/285/GCA_001689285.1_ASM168928v1	28028547	CDPH_C112
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04179	41.2	-	CEBH01	60	2024	1928	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234124	GCA_000939735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/735/GCA_000939735.1_Velvet_assembly	-	V38Z
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.08315	35.5	-	FJTS01	142	2122	2011	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888251	GCA_900074435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/435/GCA_900074435.1_VSA99	-	-
Acinetobacter baumannii 45075_6	1311093	PRJNA195174	195174	Proteobacteria	Gammaproteobacteria	3.9425	39.1	-	JMHO01	57	3783	3548	5/2/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646391	GCA_000671415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/415/GCA_000671415.1_ASM67141v1	-	45075_6
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.4881	66.3	-	CTDP01	74	6163	6011	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3294428	GCA_001373975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/975/GCA_001373975.1_251_10Pc_2_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12463	51.7	-	FEZU01	71	2487	2161	2/9/16	3/19/17	Scaffold	SC	SAMEA2674216	GCA_900037295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/295/GCA_900037295.1_14555_5_38	-	2842STDY5881379
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.25932	39.5	-	CMIZ01	75	2505	2239	3/23/15	3/11/17	Contig	SC	SAMEA1029323	GCA_001115585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/585/GCA_001115585.1_7038_7_24	-	SMRU3024
Escherichia coli KTE27	1169346	PRJNA157611	157611	Proteobacteria	Gammaproteobacteria	5.18073	50.5	-	ASTY01	7	5384	5037	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00847664	GCA_000407885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/885/GCA_000407885.1_Esch_coli_KTE27_V1	-	KTE27
Mycobacterium tuberculosis TKK-01-0094	1324301	PRJNA198189	198189	Terrabacteria group	Actinobacteria	4.41552	65.5	-	JLWF01	6	4298	4101	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053824	GCA_000661855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/855/GCA_000661855.1_Myco_tube_TKK-01-0094_V1	-	TKK-01-0094
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.87858	37.9	-	MDQG01	24	2897	2810	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410697	GCA_001710365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/365/GCA_001710365.1_ASM171036v1	-	Lm210
Campylobacter jejuni subsp. jejuni	32022	PRJNA290425	290425	Proteobacteria	delta/epsilon subdivisions	1.61953	30.5	-	MLDM01	7	1709	1626	4/26/17	5/1/17	Contig	University of Helsinki	SAMN05831999	GCA_002110615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/615/GCA_002110615.1_Cjejuni.CJ070CC21_v1.0	28408091	CJ070CC21
Salmonella enterica subsp. enterica serovar Poona str. 2010K-2244	1328331	PRJNA198792	198792	Proteobacteria	Gammaproteobacteria	4.63894	52.2	-	ARYU01	88	4701	4424	6/20/13	2/26/17	Contig	Centers for Disease Control & Prevention	SAMN02415212	GCA_000412855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/855/GCA_000412855.1_2010K-2244_Ver1	-	2010K-2244
Staphylococcus aureus OCMM6057	1409552	PRJNA223872	223872	Terrabacteria group	Firmicutes	2.88151	32.8	-	JBPE01	21	3069	2906	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381613	GCA_000540655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/655/GCA_000540655.1_Stap_aure_OCMM6057_V1	-	OCMM6057
Staphylococcus aureus MISS6125	1409554	PRJNA223874	223874	Terrabacteria group	Firmicutes	2.89154	32.7	-	JBPC01	10	3057	2893	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381615	GCA_000540675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/675/GCA_000540675.1_Stap_aure_MISS6125_V1	-	MISS6125
Salmonella enterica subsp. enterica serovar Anatum str. 06-0532	1328326	PRJNA198786	198786	Proteobacteria	Gammaproteobacteria	4.61674	52.1	-	ARYP01	43	4677	4418	6/20/13	2/26/17	Contig	Centers for Disease Control & Prevention	SAMN02415207	GCA_000412875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/875/GCA_000412875.1_06-0532Ver1	-	06-0532
Campylobacter jejuni subsp. jejuni	32022	PRJNA290425	290425	Proteobacteria	delta/epsilon subdivisions	1.62571	30.4	-	MLDL01	17	1705	1615	4/26/17	5/1/17	Contig	University of Helsinki	SAMN05831997	GCA_002110625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/625/GCA_002110625.1_Cjejuni.CJ035CC21_v1.0	28408091	CJ035CC21
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.92098	37.9	-	MDQF01	25	2973	2892	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410698	GCA_001710375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/375/GCA_001710375.1_ASM171037v1	-	Lm211
Mycobacterium tuberculosis TKK-01-0077	1324285	PRJNA198173	198173	Terrabacteria group	Actinobacteria	4.44799	65.4	-	JLWW01	3	4296	4118	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02053808	GCA_000662355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/355/GCA_000662355.1_Myco_tube_TKK-01-0077_V1	-	TKK-01-0077
Escherichia coli KTE34	1169352	PRJNA157623	157623	Proteobacteria	Gammaproteobacteria	5.12198	50.7	-	ASUA01	18	5403	4928	5/31/13	2/22/17	Scaffold	Broad Institute	SAMN00847670	GCA_000407945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/945/GCA_000407945.1_Esch_coli_KTE34_V1	-	KTE34
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10426	39.8	-	CLXV01	77	2324	2105	3/21/15	3/10/17	Contig	SC	SAMEA1028741	GCA_001115605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/605/GCA_001115605.1_6983_6_40	-	SMRU2344
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11515	51.8	-	FFAX01	65	2458	2116	2/9/16	3/21/17	Scaffold	SC	SAMEA2674274	GCA_900037305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/305/GCA_900037305.1_14555_5_67	-	2842STDY5881408
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48797	66.3	-	CUXO01	79	6172	6010	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3294429	GCA_001373995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/995/GCA_001373995.1_255_15_211Ga_contigs_500	-	-
Acinetobacter baumannii 1064293_46	1310825	PRJNA194901	194901	Proteobacteria	Gammaproteobacteria	4.26345	39.2	-	JMHL01	130	4243	3963	5/2/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692956	GCA_000671435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/435/GCA_000671435.1_ASM67143v1	-	1064293_46
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.12878	35.4	-	FJTQ01	134	2174	2049	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888246	GCA_900074445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/445/GCA_900074445.1_VSA94	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04784	41.2	-	CDUS01	61	2038	1944	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233832	GCA_000939795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/795/GCA_000939795.1_Velvet_assembly	-	E56B
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.54332	50.8	-	LXUZ01	417	4909	4308	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440984	GCA_001689295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/295/GCA_001689295.1_ASM168929v1	28028547	CDPH_C113
Clostridioides difficile	1496	PRJNA329452	329452	Terrabacteria group	Firmicutes	3.99114	28.5	-	NGUY01	99	3698	3445	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06920016	GCA_002165155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/155/GCA_002165155.1_ASM216515v1	-	WCHCD15108050
Klebsiella pneumoniae T2-1-1	1449984	PRJNA235244	235244	Proteobacteria	Gammaproteobacteria	5.39853	57.1	-	JAQL01	166	5411	5121	6/23/14	2/21/17	Contig	University of Malaya	SAMN02869886	GCA_000710855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/855/GCA_000710855.1_De_novo_Assembly	26981378	T2-1-1
Vibrio parahaemolyticus	670	PRJNA356833	356833	Proteobacteria	Gammaproteobacteria	5.29894	45.1	-	MSAQ01	126	5205	4943	5/22/17	5/24/17	Scaffold	Guangdong Institute of Microbiology	SAMN06127921	GCA_002153945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/945/GCA_002153945.1_ASM215394v1	-	Vp37
Enterococcus faecium MRSN 4777	1409948	PRJNA223622	223622	Terrabacteria group	Firmicutes	2.41381	37.7	-	LBIL01	1495	3253	3161	4/29/15	4/29/15	Contig	J. Craig Venter Institute	SAMN03486510	GCA_000981965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/965/GCA_000981965.1_ASM98196v1	-	MRSN 4777
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.81058	31.1	-	CYQE01	169	1907	1727	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487044	GCA_001292305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/305/GCA_001292305.1_RC038_S8contigs.fa	-	RC038
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98501	64	-	FVGS01	12	5029	4893	3/10/17	3/18/17	Scaffold	SC	SAMEA2275644	GCA_900133185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/185/GCA_900133185.1_12163_1_1	-	922
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.02318	64.1	-	FVHN01	9	5106	4943	3/10/17	3/18/17	Scaffold	SC	SAMEA2275817	GCA_900133195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/195/GCA_900133195.1_12163_2_60	-	1091
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.79168	31	-	CYRP01	109	1857	1729	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487081	GCA_001292325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/325/GCA_001292325.1_RC428_S45contigs.fa	-	RC428
Enterococcus faecium	1352	PRJNA267549	267549	Terrabacteria group	Firmicutes	8.20751	51	-	JUQK01	2482	-	-	7/10/15	7/13/16	Contig	University of Washington	SAMN03198064	GCA_001058635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/635/GCA_001058635.1_ASM105863v1	26230489	856_EFCM
Vibrio parahaemolyticus	670	PRJNA357352	357352	Proteobacteria	Gammaproteobacteria	5.18518	45.3	-	MSAN01	111	5110	4844	5/22/17	5/24/17	Scaffold	Guangdong Institute of Microbiology	SAMN06140976	GCA_002154015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/015/GCA_002154015.1_ASM215401v1	-	Vp294
Klebsiella pneumoniae	573	PRJNA249076	249076	Proteobacteria	Gammaproteobacteria	5.58054	57.3	-	JNHB01	121	5680	5403	7/3/14	2/21/17	Contig	Hospital Universitary 12 de octubre	SAMN02808712	GCA_000722485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/485/GCA_000722485.1_ASM72248v1	25081259	KP_ST11_OXA48
Clostridioides difficile	1496	PRJNA329452	329452	Terrabacteria group	Firmicutes	4.16328	28.5	-	NGUX01	129	3914	3646	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06920013	GCA_002165175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/175/GCA_002165175.1_ASM216517v1	-	WCHCD15116362
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.51729	50.9	-	LRRZ01	527	4966	4231	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440932	GCA_001689325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/325/GCA_001689325.1_ASM168932v1	28028547	CDPH_C8
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.08453	41.2	-	CDUH01	55	2088	1993	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233824	GCA_000939855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/855/GCA_000939855.1_Velvet_assembly	-	E23S
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.13047	35.3	-	FJTJ01	126	2171	2050	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888248	GCA_900074455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/455/GCA_900074455.1_VSA96	-	-
Acinetobacter baumannii 45075_5	1311092	PRJNA195173	195173	Proteobacteria	Gammaproteobacteria	3.91926	39	-	JMHN01	54	3760	3550	5/2/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646390	GCA_000671475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/475/GCA_000671475.1_ASM67147v1	-	45075_5
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48726	66.3	-	CTDS01	82	6168	6011	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3294430	GCA_001374015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/015/GCA_001374015.1_256_15_311Gb_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.20714	51.5	-	FFCT01	94	2558	2202	2/9/16	3/21/17	Scaffold	SC	SAMEA2674182	GCA_900037315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/315/GCA_900037315.1_14555_6_21	-	2842STDY5881458
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07307	39.7	-	CKPF01	64	2294	2082	3/21/15	3/11/17	Contig	SC	SAMEA1024674	GCA_001115625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/625/GCA_001115625.1_6680_4_23	-	19F
Escherichia coli KTE36	1169353	PRJNA157625	157625	Proteobacteria	Gammaproteobacteria	5.31862	50.6	-	ASUB01	18	5559	5191	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00847671	GCA_000407965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/965/GCA_000407965.1_Esch_coli_KTE36_V1	-	KTE36
Mycobacterium tuberculosis M1309	1448656	PRJNA235667	235667	Terrabacteria group	Actinobacteria	4.42053	65.6	-	JKOK01	7	4310	4099	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599002	GCA_000662465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/465/GCA_000662465.1_Myco_tube_M1309_V1	-	M1309
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.86525	37.9	-	MDRE01	14	2896	2821	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410793	GCA_001710385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/385/GCA_001710385.1_ASM171038v1	-	A32
Campylobacter jejuni subsp. jejuni	32022	PRJNA290425	290425	Proteobacteria	delta/epsilon subdivisions	1.63427	30.5	-	MLDN01	10	1714	1617	4/26/17	5/1/17	Contig	University of Helsinki	SAMN05832001	GCA_002110635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/635/GCA_002110635.1_Cjejuni.CJ096CC21_v1.0	28408091	CJ096CC21
Salmonella enterica subsp. enterica serovar Bareilly str. 07-0873	1328327	PRJNA198788	198788	Proteobacteria	Gammaproteobacteria	4.77201	52	-	ARYQ01	87	4902	4559	6/20/13	2/26/17	Contig	Centers for Disease Control & Prevention	SAMN02415208	GCA_000412895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/895/GCA_000412895.1_07-0873_Ver1	-	07-0873
Staphylococcus aureus UCIM6056	1409555	PRJNA223875	223875	Terrabacteria group	Firmicutes	2.90028	32.7	-	JBPB01	10	3053	2891	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381616	GCA_000540695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/695/GCA_000540695.1_Stap_aure_UCIM6056_V1	-	UCIM6056
Staphylococcus aureus KINW6016	1409557	PRJNA223877	223877	Terrabacteria group	Firmicutes	2.93661	32.9	-	JBOZ01	16	3087	2913	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381618	GCA_000540715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/715/GCA_000540715.1_Stap_aure_KINW6016_V1	-	KINW6016
Salmonella enterica subsp. enterica serovar Hadar str. 2012K-0272	1328328	PRJNA198789	198789	Proteobacteria	Gammaproteobacteria	4.68001	52.2	-	ARYR01	85	4741	4449	6/20/13	2/26/17	Contig	Centers for Disease Control & Prevention	SAMN02415209	GCA_000412915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/915/GCA_000412915.1_2012K-0266_Ver1	-	2012K-0272
Campylobacter jejuni subsp. jejuni	32022	PRJNA290425	290425	Proteobacteria	delta/epsilon subdivisions	1.62755	30.5	-	MLDP01	11	1710	1611	4/26/17	5/1/17	Contig	University of Helsinki	SAMN05832011	GCA_002110685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/685/GCA_002110685.1_Cjejuni.CJ507CC21_v1.0	28408091	CJ507CC21
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.83772	37.9	-	MDPW01	17	2868	2795	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410717	GCA_001710425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/425/GCA_001710425.1_ASM171042v1	-	Lm226
Mycobacterium tuberculosis M1310	1448657	PRJNA235668	235668	Terrabacteria group	Actinobacteria	4.42897	65.5	-	JKOJ01	2	4279	4099	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599003	GCA_000662485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/485/GCA_000662485.1_Myco_tube_M1310_V1	-	M1310
Escherichia coli KTE37	1169354	PRJNA157627	157627	Proteobacteria	Gammaproteobacteria	5.55038	50.5	-	ASUC01	25	5949	5445	5/31/13	2/22/17	Scaffold	Broad Institute	SAMN00847672	GCA_000407985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/407/985/GCA_000407985.1_Esch_coli_KTE37_V1	-	KTE37
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04363	39.6	-	CNZH02	180	2205	2006	3/22/15	3/11/17	Contig	SC	SAMEA1463298	GCA_001115805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/805/GCA_001115805.2_7553_5_65	-	PT8009
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11951	51.7	-	FERV01	97	2482	2165	2/9/16	3/19/17	Scaffold	SC	SAMEA2674014	GCA_900037505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/505/GCA_900037505.1_14355_4_77	-	2842STDY5881034
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	7.62704	65.3	-	CUXX01	187	7393	7115	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3294431	GCA_001374035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/035/GCA_001374035.1_280_15_311Bb_contigs_500	-	-
Acinetobacter baumannii 44298_3	1311080	PRJNA195161	195161	Proteobacteria	Gammaproteobacteria	4.02303	39.2	-	JMHA01	116	3986	3696	5/2/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646374	GCA_000671495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/495/GCA_000671495.1_ASM67149v1	-	44298_3
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.13712	35.5	-	FJTC01	96	2185	2096	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888277	GCA_900074465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/465/GCA_900074465.1_mad12	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.08415	41.2	-	CDWU01	57	2094	1995	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233848	GCA_000939875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/875/GCA_000939875.1_Velvet_assembly	-	F2S
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.49999	50.9	-	LYET01	543	5009	4226	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440954	GCA_001689345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/345/GCA_001689345.1_ASM168934v1	28028547	CDPH_C30
Clostridioides difficile	1496	PRJNA382235	382235	Terrabacteria group	Firmicutes	4.06823	28.5	-	NCXL01	146	3859	3562	8/14/17	8/16/17	Scaffold	Xiangya Hospital of Central South University	SAMN06702676	GCA_002250295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/295/GCA_002250295.1_ASM225029v1	28794800	LC693
Klebsiella pneumoniae	573	PRJNA246609	246609	Proteobacteria	Gammaproteobacteria	5.3283	57.3	-	JPIQ01	97	5356	5132	7/28/14	2/21/17	Contig	University of Michigan	SAMN02768808	GCA_000735285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/285/GCA_000735285.1_ASM73528v1	25212620	IA565
Vibrio parahaemolyticus	670	PRJNA354199	354199	Proteobacteria	Gammaproteobacteria	5.1279	45.2	-	MPPQ01	104	4970	4774	7/18/17	7/21/17	Scaffold	University of New Hampshire	SAMN06042546	GCA_002220905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/905/GCA_002220905.1_ASM222090v1	28687650	MAVP-90
Enterococcus faecium	1352	PRJNA301929	301929	Terrabacteria group	Firmicutes	3.28	37.7	-	LNPA01	459	3237	3010	2/17/16	2/17/16	Contig	Uppsala University	SAMN04270977	GCA_001562985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/985/GCA_001562985.1_ASM156298v1	-	VRE-1503646
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.7882	31	-	CYQF01	150	1866	1729	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487046	GCA_001292345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/345/GCA_001292345.1_RC043_S10contigs.fa	-	RC043
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23085	64	-	FVHA01	23	5272	5149	3/10/17	3/18/17	Scaffold	SC	SAMEA2275850	GCA_900133215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/215/GCA_900133215.1_12163_2_83	-	1124
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.07845	64.2	-	FSDK01	19	5125	4993	12/14/16	3/21/17	Scaffold	SC	SAMEA2259580	GCA_900133455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/455/GCA_900133455.1_11861_7_44	-	775
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.79453	31	-	CYQZ01	167	1895	1713	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487067	GCA_001292365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/365/GCA_001292365.1_RC281_S31contigs.fa	-	RC281
Enterococcus faecium	1352	PRJNA278440	278440	Terrabacteria group	Firmicutes	3.32744	37.8	-	MVGJ01	1357	4155	3827	2/23/17	2/23/17	Contig	University of Sao Paulo	SAMN06330396	GCA_002005915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/915/GCA_002005915.1_ASM200591v1	-	LIM1759
Vibrio parahaemolyticus	670	PRJNA354199	354199	Proteobacteria	Gammaproteobacteria	5.10153	45.3	-	MPPO01	26	4899	4690	7/18/17	7/21/17	Scaffold	University of New Hampshire	SAMN06042541	GCA_002220925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/925/GCA_002220925.1_ASM222092v1	28687650	G149
Klebsiella pneumoniae	573	PRJNA258037	258037	Proteobacteria	Gammaproteobacteria	5.42075	57.3	-	JQGN01	210	5365	5005	9/2/14	2/21/17	Contig	University of Malaya	SAMN02983086	GCA_000747055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/055/GCA_000747055.1_ASM74705v1	-	325
Clostridioides difficile	1496	PRJEB6886	335808	Terrabacteria group	Firmicutes	4.07885	28.4	-	CCRP01	251	3790	3587	7/29/16	3/20/17	Scaffold	UOL	SAMEA2674816	GCA_900002425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/002/425/GCA_900002425.1_CD105HS6	-	-
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.62449	50.8	-	LXUM01	428	5034	4425	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440997	GCA_001689355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/355/GCA_001689355.1_ASM168935v1	28028547	CDPH_C129
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05857	41.1	-	CEBZ01	52	2051	1957	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234054	GCA_000939895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/895/GCA_000939895.1_Velvet_assembly	-	S3G
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.13652	35.5	-	FJTH01	97	2183	2094	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888279	GCA_900074475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/475/GCA_900074475.1_mad15	-	-
Acinetobacter baumannii 44839_8	1311065	PRJNA195146	195146	Proteobacteria	Gammaproteobacteria	4.07378	39.3	-	JMHD01	113	4014	3760	5/2/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646383	GCA_000671515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/515/GCA_000671515.1_ASM67151v1	-	44839_8
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	7.54078	65.2	-	CUXV01	201	7431	7152	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296128	GCA_001374055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/055/GCA_001374055.1_278_15_111A_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16549	51.6	-	FEUS01	82	2501	2155	2/9/16	3/21/17	Scaffold	SC	SAMEA2673945	GCA_900037515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/515/GCA_900037515.1_14355_6_69	-	2842STDY5881218
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06734	39.5	-	CNTU02	140	2234	2014	3/22/15	3/11/17	Contig	SC	SAMEA1032474	GCA_001115825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/825/GCA_001115825.2_6999_5_10	-	166637
Escherichia coli KTE38	1169355	PRJNA157629	157629	Proteobacteria	Gammaproteobacteria	5.63929	50.4	-	ASUD01	27	5925	5422	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00847673	GCA_000408005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/005/GCA_000408005.1_Esch_coli_KTE38_V1	-	KTE38
Mycobacterium tuberculosis M1315	1448658	PRJNA235669	235669	Terrabacteria group	Actinobacteria	4.43789	65.5	-	JKOI01	7	4279	4095	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599004	GCA_000662505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/505/GCA_000662505.1_Myco_tube_M1315_V1	-	M1315
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.96147	37.9	-	MDPL01	26	3000	2912	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410583	GCA_001710445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/445/GCA_001710445.1_ASM171044v1	-	Lm50
Campylobacter jejuni subsp. jejuni	32022	PRJNA290425	290425	Proteobacteria	delta/epsilon subdivisions	1.72202	30.3685	plasmid unnamed:NZ_CM007857.1/CM007857.1	MLDQ01	20	1850	1731	4/26/17	5/6/17	Contig	University of Helsinki	SAMN05831998	GCA_002110695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/695/GCA_002110695.1_Cjejuni.CJ069CC21_v1.0	28408091	CJ069CC21
Salmonella enterica subsp. enterica serovar Hartford str. 2012K-0272	1328329	PRJNA198790	198790	Proteobacteria	Gammaproteobacteria	4.85579	52	-	ARYS01	117	4979	4673	6/20/13	2/26/17	Contig	Centers for Disease Control & Prevention	SAMN02415210	GCA_000412935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/935/GCA_000412935.1_2012K-0273_Ver1	-	2012K-0272
Staphylococcus aureus FVRH6011	1409558	PRJNA223878	223878	Terrabacteria group	Firmicutes	2.92875	32.9	-	JBLG01	23	3088	2914	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381619	GCA_000540735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/735/GCA_000540735.1_Stap_aure_FVRH6011_V1	-	FVRH6011
Staphylococcus aureus HOAG6092	1409559	PRJNA223879	223879	Terrabacteria group	Firmicutes	2.87948	32.8	-	JBLF01	16	3007	2847	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381620	GCA_000540755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/755/GCA_000540755.1_Stap_aure_HOAG6092_V1	-	HOAG6092
Salmonella enterica subsp. enterica serovar Mbandaka str. 2012K-0273	1328330	PRJNA198791	198791	Proteobacteria	Gammaproteobacteria	4.7464	52.1	-	ARYT01	148	4863	4537	6/27/13	2/26/17	Contig	Centers for Disease Control & Prevention	SAMN02415211	GCA_000416295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/295/GCA_000416295.1_2012K-0273_Ver1	-	2012K-0273
Campylobacter jejuni subsp. jejuni	32022	PRJNA290425	290425	Proteobacteria	delta/epsilon subdivisions	1.80288	30.2693	plasmid unnamed:NZ_CM007858.1/CM007858.1	MLDR01	33	1973	1857	4/26/17	5/6/17	Contig	University of Helsinki	SAMN05832000	GCA_002110705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/705/GCA_002110705.1_Cjejuni.CJ076CC21_v1.0	28408091	CJ076CC21
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.88287	38	-	MDQD01	24	2897	2820	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410701	GCA_001710455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/455/GCA_001710455.1_ASM171045v1	-	Lm214
Mycobacterium tuberculosis M1317	1448659	PRJNA235670	235670	Terrabacteria group	Actinobacteria	4.42058	65.5	-	JKOH01	4	4264	4082	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599005	GCA_000662525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/525/GCA_000662525.1_Myco_tube_M1317_V1	-	M1317
Escherichia coli KTE40	1169357	PRJNA157633	157633	Proteobacteria	Gammaproteobacteria	5.08648	50.9	-	ASUE01	17	5333	4937	5/31/13	2/22/17	Scaffold	Broad Institute	SAMN00847675	GCA_000408025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/025/GCA_000408025.1_Esch_coli_KTE40_V1	-	KTE40
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.06874	39.6	-	CMHV01	60	2268	2049	3/23/15	3/4/17	Contig	SC	SAMEA1029290	GCA_001115925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/925/GCA_001115925.1_7038_6_13	-	SMRU2989
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16848	51.5	-	FEXW01	70	2527	2154	2/9/16	3/21/17	Scaffold	SC	SAMEA2674525	GCA_900037525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/525/GCA_900037525.1_14355_7_59	-	2842STDY5881688
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.57908	66.3	-	CTFI01	52	6243	6085	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296129	GCA_001374075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/075/GCA_001374075.1_279_15_211Gc_contigs_500	-	-
Acinetobacter baumannii 44298_5	1311082	PRJNA195163	195163	Proteobacteria	Gammaproteobacteria	4.04346	39.3	-	JMHB01	110	4008	3721	5/2/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646376	GCA_000671535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/535/GCA_000671535.1_ASM67153v1	-	44298_5
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.13068	35.5	-	FJTR01	114	2175	2075	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888278	GCA_900074485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/485/GCA_900074485.1_mad14	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.0582	41.1	-	CECL01	59	2047	1949	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234102	GCA_000939935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/935/GCA_000939935.1_Velvet_assembly	-	V20B
Shigella sonnei	624	PRJNA300887	300887	Proteobacteria	Gammaproteobacteria	4.54979	50.8	-	LXUV01	416	4972	4320	7/20/16	6/12/17	Scaffold	California Department of Public Health	SAMN04440988	GCA_001689365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/689/365/GCA_001689365.1_ASM168936v1	28028547	CDPH_C117
Clostridioides difficile	1496	PRJEB6886	335808	Terrabacteria group	Firmicutes	4.15074	28.6	-	CCRO01	1	3961	3706	7/29/16	4/10/17	Scaffold	UOL	SAMEA2674817	GCA_900002435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/002/435/GCA_900002435.1_CD105HS9	-	-
Klebsiella pneumoniae	573	PRJNA258328	258328	Proteobacteria	Gammaproteobacteria	5.35195	57.4	-	JQDY01	102	5348	5118	10/6/14	2/21/17	Contig	CDPH	SAMN02996355	GCA_000763925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/925/GCA_000763925.1_CDPH5262-4	25977423	CDPH5262
Vibrio parahaemolyticus	670	PRJNA354199	354199	Proteobacteria	Gammaproteobacteria	5.13478	45.2	-	MPPR01	79	4972	4794	7/18/17	7/21/17	Scaffold	University of New Hampshire	SAMN06042547	GCA_002220995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/220/995/GCA_002220995.1_ASM222099v1	28687650	MAVP-94
Enterococcus faecium	1352	PRJNA278440	278440	Terrabacteria group	Firmicutes	2.61241	38	-	MVGK01	1	2786	2366	2/23/17	2/23/17	Contig	University of Sao Paulo	SAMN06330385	GCA_002005935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/935/GCA_002005935.1_ASM200593v1	-	LIM563
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.69066	31.3	-	CYPZ01	94	1766	1636	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487040	GCA_001292405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/405/GCA_001292405.1_RC018_S4contigs.fa	-	RC018
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.04784	64.2	-	FSDH01	39	5040	4897	12/14/16	3/21/17	Scaffold	SC	SAMEA2070780	GCA_900133465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/465/GCA_900133465.1_10396_8_2	-	386
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.91116	64.1	-	FVHL01	16	4952	4819	3/10/17	3/18/17	Scaffold	SC	SAMEA2259604	GCA_900133485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/485/GCA_900133485.1_11861_7_64	-	799
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.82689	31	-	CYRL01	306	1960	1747	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487076	GCA_001292425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/425/GCA_001292425.1_RC386_S40contigs.fa	-	RC386
Enterococcus faecium	1352	PRJNA278440	278440	Terrabacteria group	Firmicutes	2.6259	38	-	MVGL01	1	2799	1965	2/23/17	2/23/17	Contig	University of Sao Paulo	SAMN06330387	GCA_002005975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/975/GCA_002005975.1_ASM200597v1	-	LIM716
Vibrio parahaemolyticus AQ3810	419109	PRJNA18601	18601	Proteobacteria	Gammaproteobacteria	5.78143	45.5	-	AAWQ01	971	5579	5509	1/10/07	12/5/13	Scaffold	TIGR	SAMN02435886	GCA_000154045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/154/045/GCA_000154045.1_ASM15404v1	-	AQ3810
Klebsiella pneumoniae	573	PRJNA258327	258327	Proteobacteria	Gammaproteobacteria	5.36057	57.3	-	JQDX01	112	5369	5134	10/6/14	2/21/17	Contig	CDPH	SAMN02996354	GCA_000763935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/935/GCA_000763935.1_CDPH3823-4	25977423	CDPH3823
Clostridioides difficile	1496	PRJEB6886	335808	Terrabacteria group	Firmicutes	4.25247	28.3	-	CCRQ01	185	3974	3657	7/29/16	8/3/17	Scaffold	UOL	SAMEA2674815	GCA_900002445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/002/445/GCA_900002445.1_CD105HS4	-	-
Shigella sonnei	624	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.39242	50.7	-	MSKE02	299	4685	4195	1/4/17	3/4/17	Scaffold	University of California at Davis	SAMN03358420	GCA_001933245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/933/245/GCA_001933245.2_ASM193324v2	-	BCW_4885
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.10896	41	-	CDXT01	67	2099	1980	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234056	GCA_000939995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/995/GCA_000939995.1_Velvet_assembly	-	S4H
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.12794	35.5	-	FJTF01	100	2176	2082	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888276	GCA_900074495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/495/GCA_900074495.1_mad11	-	-
Acinetobacter baumannii 44298_8	1311085	PRJNA195166	195166	Proteobacteria	Gammaproteobacteria	3.9648	38.9	-	JMHC01	139	3955	3663	5/2/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646379	GCA_000671555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/555/GCA_000671555.1_ASM67155v1	-	44298_8
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	7.58489	65.3	-	CUXW01	182	7359	7058	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296130	GCA_001374095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/095/GCA_001374095.1_281_Tsb_Bead_Dwl_Pool_1_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15704	51.5	-	FFAD01	92	2515	2141	2/9/16	3/21/17	Scaffold	SC	SAMEA2674232	GCA_900037535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/535/GCA_900037535.1_14555_5_46	-	2842STDY5881387
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.07576	39.7	-	CMMQ01	72	2296	2086	3/23/15	3/4/17	Contig	SC	SAMEA1029340	GCA_001115985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/985/GCA_001115985.1_7068_4_5	-	SMRU3125
Escherichia coli KTE41	1169358	PRJNA157635	157635	Proteobacteria	Gammaproteobacteria	5.0094	50.9	-	ASUF01	9	5252	4797	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00847676	GCA_000408045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/045/GCA_000408045.1_Esch_coli_KTE41_V1	-	KTE41
Mycobacterium tuberculosis M1319	1448660	PRJNA235671	235671	Terrabacteria group	Actinobacteria	4.42678	65.5	-	JKOG01	4	4284	4104	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599006	GCA_000662545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/545/GCA_000662545.1_Myco_tube_M1319_V1	-	M1319
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.8844	37.9	-	MDQX01	14	2938	2863	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410804	GCA_001710465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/465/GCA_001710465.1_ASM171046v1	-	A510
Campylobacter jejuni subsp. jejuni	32022	PRJNA290425	290425	Proteobacteria	delta/epsilon subdivisions	1.62576	30.4	-	MLDK01	25	1710	1612	4/26/17	5/1/17	Contig	University of Helsinki	SAMN05831996	GCA_002110715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/715/GCA_002110715.1_Cjejuni.CJ006CC21_v1.0	28408091	CJ006CC21
Salmonella enterica subsp. enterica serovar Manhattan str. 111113	1327958	PRJEB1854	201420	Proteobacteria	Gammaproteobacteria	4.6841	52.2	-	CBKW02	18	4736	4501	5/29/13	2/27/17	Contig	IZSLER-PR	SAMEA2272616	GCA_000430975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/975/GCA_000430975.2_ASM43097v2	25653407	111113
Staphylococcus aureus SCOA6048	1409560	PRJNA223880	223880	Terrabacteria group	Firmicutes	2.92673	32.8	-	JBLE01	17	3103	2946	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381621	GCA_000540775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/775/GCA_000540775.1_Stap_aure_SCOA6048_V1	-	SCOA6048
Staphylococcus aureus SJOS6105	1409561	PRJNA223881	223881	Terrabacteria group	Firmicutes	2.8194	32.9	-	JBLD01	35	2958	2781	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381622	GCA_000540795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/795/GCA_000540795.1_Stap_aure_SJOS6105_V1	-	SJOS6105
Salmonella enterica subsp. enterica serovar Typhimurium str. STm7	1352603	PRJNA210006	210006	Proteobacteria	Gammaproteobacteria	5.09082	52.1	-	ATWR01	117	5270	5010	8/7/13	2/26/17	Contig	University of Melbourne	SAMN02217010	GCA_000444835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/444/835/GCA_000444835.1_STm7.1	-	STm7
Campylobacter jejuni subsp. jejuni	32022	PRJNA290425	290425	Proteobacteria	delta/epsilon subdivisions	1.79415	30.266	plasmid unnamed:NZ_CM007860.1/CM007860.1	MLDT01	50	1960	1825	4/26/17	5/6/17	Contig	University of Helsinki	SAMN05832005	GCA_002110765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/765/GCA_002110765.1_Cjejuni.CJ501CC21_v1.0	28408091	CJ501CC21
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.90243	37.9	-	MDQZ01	14	2945	2871	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410786	GCA_001710485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/485/GCA_001710485.1_ASM171048v1	-	A506
Mycobacterium tuberculosis M1324	1448661	PRJNA235672	235672	Terrabacteria group	Actinobacteria	4.45207	65.5	-	JKOF01	6	4300	4109	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599007	GCA_000662565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/565/GCA_000662565.1_Myco_tube_M1324_V1	-	M1324
Escherichia coli KTE182	1181728	PRJNA163377	163377	Proteobacteria	Gammaproteobacteria	5.62554	50.6	-	ASUG01	20	5831	5429	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00974037	GCA_000408065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/065/GCA_000408065.1_Esch_coli_KTE182_V1	-	KTE182
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.02368	39.8	-	CNRR02	170	2173	1976	3/22/15	3/11/17	Contig	SC	SAMEA1032648	GCA_001116005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/005/GCA_001116005.2_6999_2_15	-	R34-3221
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.17228	51.4	-	FFCC01	118	2495	2154	2/9/16	3/21/17	Scaffold	SC	SAMEA2674126	GCA_900037545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/545/GCA_900037545.1_14555_6_3	-	2842STDY5881440
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	7.10223	65.8	-	CTFJ01	140	6924	6682	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296131	GCA_001374115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/115/GCA_001374115.1_282_Rw110_contigs_500	-	-
Acinetobacter baumannii 44839_9	1311066	PRJNA195147	195147	Proteobacteria	Gammaproteobacteria	4.04863	39.2	-	JMHE01	111	4008	3742	5/2/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646384	GCA_000671575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/575/GCA_000671575.1_ASM67157v1	-	44839_9
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.11728	35.5	-	FJTW01	95	2169	2080	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888280	GCA_900074505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/505/GCA_900074505.1_mad24	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.09538	41.1	-	CDXP01	57	2104	2010	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234045	GCA_000940015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/015/GCA_000940015.1_Velvet_assembly	-	S2W
Shigella sonnei	624	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.53057	50.9	-	MSKH02	286	4857	4419	1/4/17	3/4/17	Scaffold	University of California at Davis	SAMN03358421	GCA_001933295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/933/295/GCA_001933295.2_ASM193329v2	-	BCW_4886
Clostridioides difficile	1496	PRJEB6886	335808	Terrabacteria group	Firmicutes	4.25408	28.3	-	CCRX01	230	-	-	7/29/16	1/26/17	Scaffold	UOL	SAMEA2674824	GCA_900002455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/002/455/GCA_900002455.1_CD105HS10	-	-
Klebsiella pneumoniae	573	PRJNA257766	257766	Proteobacteria	Gammaproteobacteria	5.24296	57.6	-	JQSE01	159	5209	4967	10/10/14	2/21/17	Contig	University of Malaya	SAMN02978814	GCA_000766125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/766/125/GCA_000766125.1_ASM76612v1	-	349
Vibrio parahaemolyticus v110	1300351	PRJNA192175	192175	Proteobacteria	Gammaproteobacteria	5.50502	45.2	-	AQPJ01	167	-	-	5/1/13	1/8/14	Scaffold	The Hong Kong Polytechnic University	SAMN02471143	GCA_000388025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/025/GCA_000388025.1_SOAPdenovo_version_1.05_for_Vibrio_parahaemolyticus_strain_v110	23788537	v110
Enterococcus faecium	1352	PRJNA278440	278440	Terrabacteria group	Firmicutes	2.99035	38	-	MVGM01	1	3181	2728	2/23/17	2/23/17	Contig	University of Sao Paulo	SAMN06330388	GCA_002006045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/045/GCA_002006045.1_ASM200604v1	-	LIM554
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.799	31	-	CYRD01	118	1868	1728	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487069	GCA_001292445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/445/GCA_001292445.1_RC284_S33contigs.fa	-	RC284
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18479	64.2	-	FSDM01	45	5195	5024	12/14/16	3/21/17	Scaffold	SC	SAMEA2259608	GCA_900133495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/495/GCA_900133495.1_11861_7_68	-	803
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.19906	64.1	-	FSDJ01	19	5269	5128	12/14/16	3/21/17	Scaffold	SC	SAMEA2259583	GCA_900133515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/515/GCA_900133515.1_11861_7_47	-	778
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.72582	30.3	-	CYRR01	72	1837	1696	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487083	GCA_001292485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/485/GCA_001292485.1_RC459_S47contigs.fa	-	RC459
Enterococcus faecium	1352	PRJNA278440	278440	Terrabacteria group	Firmicutes	2.79487	37.9	-	MVGN01	1	2996	2286	2/23/17	2/23/17	Contig	University of Sao Paulo	SAMN06330389	GCA_002006055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/055/GCA_002006055.1_ASM200605v1	-	LIM714
Vibrio parahaemolyticus V-223/04	1238219	PRJNA176654	176654	Proteobacteria	Gammaproteobacteria	6.47443	45	-	JALH01	1061	12296	12221	2/5/14	8/4/14	Scaffold	IGS	SAMN01923796	GCA_000558905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/905/GCA_000558905.2_vpV22304	-	V-223/04
Klebsiella pneumoniae MRSN 1319	1409961	PRJNA223624	223624	Proteobacteria	Gammaproteobacteria	5.46935	57.3	-	JSVB01	52	5553	5252	11/10/14	2/21/17	Contig	J. Craig Venter Institute	SAMN03160297	GCA_000773875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/875/GCA_000773875.1_gdodcwi15_v01	-	MRSN 1319
Clostridioides difficile	1496	PRJEB6886	335808	Terrabacteria group	Firmicutes	4.10514	28.5	-	CCRY01	130	3815	3616	7/29/16	3/20/17	Scaffold	UOL	SAMEA2674826	GCA_900002475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/002/475/GCA_900002475.1_CD105HS22	-	-
Shigella sonnei	624	PRJEB16246	348964	Proteobacteria	Gammaproteobacteria	4.91707	50.3	-	FNIS01	101	5182	4820	10/20/16	2/25/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN05216485	GCA_900103855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/103/855/GCA_900103855.1_IMG-taxon_2654588181_annotated_assembly	-	NLAE-zl-G496
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.06416	41.1	-	CDXQ01	59	2055	1956	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234050	GCA_000940055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/055/GCA_000940055.1_Velvet_assembly	-	S3C
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.12368	35.6	-	FJTT01	134	2182	2078	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888282	GCA_900074515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/515/GCA_900074515.1_mad29	-	-
Acinetobacter baumannii 45075_1	1311088	PRJNA195169	195169	Proteobacteria	Gammaproteobacteria	3.94392	39	-	JMHF01	52	3759	3528	5/2/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646386	GCA_000671595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/595/GCA_000671595.1_ASM67159v1	-	45075_1
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	7.64834	65.3	-	CUXY01	204	7422	7128	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296132	GCA_001374135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/135/GCA_001374135.1_283_Rw172_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.13666	51.7	-	FFEA01	74	2506	2163	2/9/16	3/19/17	Scaffold	SC	SAMEA2674275	GCA_900037555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/555/GCA_900037555.1_14555_6_61	-	2842STDY5881498
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.10339	39.6	-	COAK02	239	2260	2074	3/23/15	3/11/17	Contig	SC	SAMEA1463275	GCA_001116045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/045/GCA_001116045.2_7622_2_1	-	BR1000
Escherichia coli KTE185	1181731	PRJNA163383	163383	Proteobacteria	Gammaproteobacteria	5.2733	50.4	-	ASUH01	11	5403	5043	5/31/13	2/22/17	Scaffold	Broad Institute	SAMN00974040	GCA_000408085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/085/GCA_000408085.1_Esch_coli_KTE185_V1	-	KTE185
Mycobacterium tuberculosis M1325	1448662	PRJNA235673	235673	Terrabacteria group	Actinobacteria	4.43439	65.6	-	JKOE01	9	4304	4108	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599008	GCA_000662585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/585/GCA_000662585.1_Myco_tube_M1325_V1	-	M1325
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.94398	37.9	-	MDPX01	25	3015	2925	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410716	GCA_001710525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/525/GCA_001710525.1_ASM171052v1	-	Lm225
Campylobacter jejuni subsp. jejuni	32022	PRJNA290425	290425	Proteobacteria	delta/epsilon subdivisions	1.69029	30.383	plasmid unnamed:NZ_CM007861.1/CM007861.1	MLDU01	24	1790	1693	4/26/17	5/6/17	Contig	University of Helsinki	SAMN05832006	GCA_002110775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/775/GCA_002110775.1_Cjejuni.CJ502CC21_v1.0	28408091	CJ502CC21
Salmonella enterica subsp. enterica serovar Typhimurium str. ST1489	1365218	PRJNA212364	212364	Proteobacteria	Gammaproteobacteria	4.76249	52.1	-	AUVD01	70	4884	4600	9/9/13	8/21/17	Contig	The Chinese University of Hong Kong	SAMN02415266	GCA_000465195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/195/GCA_000465195.1_ST1489_for_the_version_1_of_Salmonella_enterica_subsp._enterica_serovar_Typhimurium_ST1489	24136846	ST1489
Staphylococcus aureus SJOS6124	1409563	PRJNA223883	223883	Terrabacteria group	Firmicutes	2.89534	32.9	-	JBLB01	13	3043	2879	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381624	GCA_000540815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/815/GCA_000540815.1_Stap_aure_SJOS6124_V1	-	SJOS6124
Staphylococcus aureus COAS6052	1409566	PRJNA223886	223886	Terrabacteria group	Firmicutes	2.93976	32.8	-	JBKZ01	16	3113	2950	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381627	GCA_000540835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/835/GCA_000540835.1_Stap_aure_COAS6052_V1	-	COAS6052
Salmonella enterica subsp. enterica serovar Typhimurium str. ST4848	1379271	PRJNA213563	213563	Proteobacteria	Gammaproteobacteria	4.96267	52.2	-	AUXE01	63	5110	4860	9/17/13	2/26/17	Contig	The Chinese University of Hong Kong	SAMN02296697	GCA_000468255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/255/GCA_000468255.1_ST4848_v1	24136846	ST4848
Campylobacter jejuni subsp. jejuni	32022	PRJNA290425	290425	Proteobacteria	delta/epsilon subdivisions	1.62688	30.4	-	MLDO01	22	1709	1609	4/26/17	5/1/17	Contig	University of Helsinki	SAMN05832003	GCA_002110805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/805/GCA_002110805.1_Cjejuni.CJ098CC21_v1.0	28408091	CJ098CC21
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.96815	37.8	-	MDPN01	25	3012	2920	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410580	GCA_001710535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/535/GCA_001710535.1_ASM171053v1	-	Lm33
Mycobacterium tuberculosis M1340	1448663	PRJNA235674	235674	Terrabacteria group	Actinobacteria	4.40559	65.6	-	JKOD01	5	4264	4084	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599009	GCA_000662605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/605/GCA_000662605.1_Myco_tube_M1340_V1	-	M1340
Escherichia coli KTE186	1181732	PRJNA163385	163385	Proteobacteria	Gammaproteobacteria	5.28408	50.6	-	ASUI01	20	5562	5095	5/31/13	2/22/17	Scaffold	Broad Institute	SAMN00974041	GCA_000408105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/105/GCA_000408105.1_Esch_coli_KTE186_V1	-	KTE186
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14273	39.6	-	CKKO01	70	2362	2150	3/21/15	3/4/17	Contig	SC	SAMEA1024120	GCA_001116065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/065/GCA_001116065.1_6631_7_2	-	13
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12353	51.8	-	FEUC01	84	2486	2167	2/9/16	3/19/17	Scaffold	SC	SAMEA2673824	GCA_900038045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/045/GCA_900038045.1_14355_6_21	-	2842STDY5881170
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	7.21477	65.7	-	CTFL01	161	7025	6775	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296133	GCA_001374155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/155/GCA_001374155.1_284_Rw202_contigs_500	-	-
Acinetobacter baumannii 45075_2	1311089	PRJNA195170	195170	Proteobacteria	Gammaproteobacteria	3.96841	39.1	-	JMHG01	52	3777	3531	5/2/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646387	GCA_000671615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/615/GCA_000671615.1_ASM67161v1	-	45075_2
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.13905	35.5	-	FJTN01	99	2188	2096	9/30/16	3/21/17	Contig	INSTITUT PASTEUR	SAMEA3888281	GCA_900074525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/525/GCA_900074525.1_mad25	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.22856	40.9	-	CDSQ01	212	2203	2001	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233764	GCA_000940075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/075/GCA_000940075.1_Velvet_assembly	-	type strain: B21
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.59337	50.9	-	FTSY01	401	5099	4406	1/28/17	2/26/17	Scaffold	SC	SAMEA2054229	GCA_900157475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/475/GCA_900157475.1_9789_6_40	-	2090STDY5461754
Clostridioides difficile	1496	PRJEB6886	335808	Terrabacteria group	Firmicutes	4.15341	28.6	-	CCRU01	173	3922	3721	7/29/16	5/22/17	Scaffold	UOL	SAMEA2674822	GCA_900002485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/002/485/GCA_900002485.1_CD105HS16	-	-
Klebsiella pneumoniae	573	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.54649	57.3	-	JTAX01	3	5566	5025	11/14/14	7/6/17	Contig	US Food and Drug Administration 	SAMN02934538	GCA_000783515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/515/GCA_000783515.1_ASM78351v1	-	FDAARGOS_84
Vibrio parahaemolyticus	670	PRJNA288141	288141	Proteobacteria	Gammaproteobacteria	6.09923	44	-	LFWN01	272	5947	5665	8/17/15	8/17/15	Scaffold	Health Canada	SAMN03795188	GCA_001268045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/045/GCA_001268045.1_ASM126804v1	-	S456-5
Enterococcus faecium	1352	PRJNA329509	329509	Terrabacteria group	Firmicutes	2.49158	38.2	-	MSHT01	2657	3957	3702	5/22/17	5/22/17	Contig	Intermountain Healthcare	SAMN05413848	GCA_002158235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/158/235/GCA_002158235.1_ASM215823v1	-	IHC3
Campylobacter coli	195	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	2.00613	31.6	-	CXZA01	1004	2047	1748	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487037	GCA_001292505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/505/GCA_001292505.1_RC008_S1contigs.fa	-	RC008
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21443	64	-	FSDL01	21	5282	5150	12/14/16	3/21/17	Scaffold	SC	SAMEA2259629	GCA_900133525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/525/GCA_900133525.1_11861_7_84	-	824
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.97354	64	-	FVHP01	17	4963	4795	3/10/17	3/18/17	Scaffold	SC	SAMEA2259634	GCA_900133535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/535/GCA_900133535.1_11861_7_89	-	829
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.8458	31.1	-	FBLG01	85	1912	1771	12/17/15	3/19/17	Scaffold	INSTITUTE OF FOOD RESEARCH	SAMEA3683359	GCA_001491115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/491/115/GCA_001491115.1_SWAN361	-	n/a
Enterococcus faecium	1352	PRJEB18432	356030	Terrabacteria group	Firmicutes	4.00862	37.1	-	FREQ01	2680	-	-	12/8/16	12/8/16	Contig	RCPCM	SAMEA18412918	GCA_900143505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/505/GCA_900143505.1_Hp_22-10_05	-	-
Vibrio parahaemolyticus	670	PRJNA288141	288141	Proteobacteria	Gammaproteobacteria	5.76161	44.6	-	LIRV01	235	5344	5166	9/9/15	9/9/15	Scaffold	Health Canada	SAMN03799831	GCA_001280625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/625/GCA_001280625.1_ASM128062v1	-	HS-22-14
Klebsiella pneumoniae	573	PRJNA257163	257163	Proteobacteria	Gammaproteobacteria	6.16107	57	-	JRTV01	12	6266	5903	11/23/14	2/21/17	Contig	University of Malaya	SAMN03097736	GCA_000786375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/375/GCA_000786375.2_ASM78637v2	26816553	223/14
Clostridioides difficile	1496	PRJEB6886	335808	Terrabacteria group	Firmicutes	4.05122	28.5	-	CCRV01	159	3699	3529	7/29/16	3/21/17	Scaffold	UOL	SAMEA2674823	GCA_900002525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/002/525/GCA_900002525.1_CD105HS12	-	-
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.75772	50.5	-	FTSN01	398	5384	4527	1/28/17	2/26/17	Scaffold	SC	SAMEA1971948	GCA_900157485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/485/GCA_900157485.1_9789_6_35	-	2090STDY5461749
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05197	41.2	-	CDWF01	55	2040	1944	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233837	GCA_000940095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/095/GCA_000940095.1_Velvet_assembly	-	E63F
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.11887	35.6	-	FJTX01	160	2173	2073	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888284	GCA_900074535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/535/GCA_900074535.1_mad34	-	-
Acinetobacter baumannii 45075_3	1311090	PRJNA195171	195171	Proteobacteria	Gammaproteobacteria	3.95302	39.1	-	JMHH01	51	3819	3544	5/2/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646388	GCA_000671635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/635/GCA_000671635.1_ASM67163v1	-	45075_3
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.82055	66	-	CUXZ01	139	6557	6341	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296134	GCA_001374175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/175/GCA_001374175.1_285_Tsb_7_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.20571	51.4	-	FFBA01	107	2578	2188	2/9/16	3/21/17	Scaffold	SC	SAMEA2674280	GCA_900038055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/055/GCA_900038055.1_14555_5_70	-	2842STDY5881411
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0529	39.6	-	CNZA02	167	2218	2013	3/23/15	3/11/17	Contig	SC	SAMEA1463194	GCA_001116125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/125/GCA_001116125.2_7553_5_50	-	NP7078
Escherichia coli KTE195	1181741	PRJNA163403	163403	Proteobacteria	Gammaproteobacteria	5.40067	50.4	-	ASUJ01	16	5520	5101	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00974050	GCA_000408125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/125/GCA_000408125.1_Esch_coli_KTE195_V1	-	KTE195
Mycobacterium tuberculosis M1373	1448664	PRJNA235675	235675	Terrabacteria group	Actinobacteria	4.44548	65.5	-	JKOC01	6	4318	4130	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599010	GCA_000662625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/625/GCA_000662625.1_Myco_tube_M1373_V1	-	M1373
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.93532	37.8	-	MDPB01	18	2984	2906	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410695	GCA_001710555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/555/GCA_001710555.1_ASM171055v1	-	OCF58
Campylobacter jejuni subsp. jejuni	32022	PRJNA290425	290425	Proteobacteria	delta/epsilon subdivisions	1.79517	30.368	plasmid unnamed:NZ_CM007859.1/CM007859.1	MLDS01	35	1955	1840	4/26/17	5/6/17	Contig	University of Helsinki	SAMN05832004	GCA_002110815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/815/GCA_002110815.1_Cjejuni.CJ500CC21_v1.0	28408091	CJ500CC21
Salmonella enterica subsp. enterica serovar Kentucky str. 22694	1124952	PRJNA78335	78335	Proteobacteria	Gammaproteobacteria	5.00106	51.9	-	AUQH01	101	5112	4780	10/17/13	2/26/17	Contig	FDA	SAMN01816165	GCA_000474295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/295/GCA_000474295.1_CFSAN001164_01.0	-	22694
Staphylococcus aureus SJOS6118	1409567	PRJNA223887	223887	Terrabacteria group	Firmicutes	2.83645	32.8	-	JBKY01	13	2952	2788	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381628	GCA_000540855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/855/GCA_000540855.1_Stap_aure_SJOS6118_V1	-	SJOS6118
Staphylococcus aureus SJOS6125	1409568	PRJNA223888	223888	Terrabacteria group	Firmicutes	2.84423	32.8	-	JBKX01	28	2988	2815	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381629	GCA_000540875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/875/GCA_000540875.1_Stap_aure_SJOS6125_V1	-	SJOS6125
Salmonella enterica subsp. enterica serovar Kentucky str. N312	1124953	PRJNA78337	78337	Proteobacteria	Gammaproteobacteria	4.86951	52	-	AUQI01	100	4942	4637	10/17/13	2/26/17	Contig	FDA	SAMN01816166	GCA_000474315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/315/GCA_000474315.1_CFSAN001165_01.0	-	N312
Campylobacter jejuni subsp. jejuni	32022	PRJNA290425	290425	Proteobacteria	delta/epsilon subdivisions	1.69006	30.383	plasmid unnamed:NZ_CM007862.1/CM007862.1	MLDV01	23	1784	1696	4/26/17	5/6/17	Contig	University of Helsinki	SAMN05832007	GCA_002110825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/825/GCA_002110825.1_Cjejuni.CJ503CC21_v1.0	28408091	CJ503CC21
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.93778	37.9	-	MDQP01	24	3030	2943	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410779	GCA_001710575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/575/GCA_001710575.1_ASM171057v1	-	A533
Mycobacterium tuberculosis M1374	1448665	PRJNA235676	235676	Terrabacteria group	Actinobacteria	4.41422	65.6	-	JKOB01	5	4288	4090	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599011	GCA_000662645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/645/GCA_000662645.1_Myco_tube_M1374_V1	-	M1374
Escherichia coli KTE198	1181744	PRJNA163409	163409	Proteobacteria	Gammaproteobacteria	5.35625	50.6	-	ASUK01	16	5484	5090	5/31/13	2/22/17	Scaffold	Broad Institute	SAMN00974053	GCA_000408145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/145/GCA_000408145.1_Esch_coli_KTE198_V1	-	KTE198
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.17537	39.7	-	CLSB01	37	2367	2124	3/21/15	3/6/17	Contig	SC	SAMEA1028700	GCA_001116285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/285/GCA_001116285.1_6972_3_17	-	SMRU2585
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.10297	51.8	-	FERG01	69	2451	2113	2/9/16	3/21/17	Scaffold	SC	SAMEA2673897	GCA_900038075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/075/GCA_900038075.1_14355_4_41	-	2842STDY5880998
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48101	66.3	-	CUYA01	65	6108	5959	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296135	GCA_001374195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/195/GCA_001374195.1_286_2_5Pc_6_contigs_500	-	-
Acinetobacter baumannii 25442_1	1311118	PRJNA195240	195240	Proteobacteria	Gammaproteobacteria	4.1199	39.1	-	JMHI01	116	4116	3853	5/2/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02649420	GCA_000671655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/655/GCA_000671655.1_ASM67165v1	-	25442_1
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.13725	35.5	-	FJTL01	106	2189	2095	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888283	GCA_900074545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/545/GCA_900074545.1_mad33	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05766	41.1	-	CDSU01	59	2050	1951	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233768	GCA_000940155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/155/GCA_000940155.1_Velvet_assembly	-	B23U
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.6165	50.8	-	FTRZ01	447	5157	4434	1/28/17	2/26/17	Scaffold	SC	SAMEA2054386	GCA_900157495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/495/GCA_900157495.1_9789_6_60	-	2090STDY5461774
Clostridioides difficile	1496	PRJEB6886	335808	Terrabacteria group	Firmicutes	4.07311	28.5	-	CCRS01	94	3731	3515	7/29/16	8/3/17	Scaffold	UOL	SAMEA2674818	GCA_900002535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/002/535/GCA_900002535.1_CD105HS8	-	-
Klebsiella pneumoniae	573	PRJNA264954	264954	Proteobacteria	Gammaproteobacteria	6.02359	56.6	-	JSER01	106	6177	5754	12/19/14	2/21/17	Contig	IOC- FIOCRUZ	SAMN03144673	GCA_000805735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/735/GCA_000805735.1_ASM80573v1	-	CCBH13327
Vibrio parahaemolyticus	670	PRJNA288141	288141	Proteobacteria	Gammaproteobacteria	5.84599	44.8	-	LIRS01	162	5403	5176	9/9/15	9/9/15	Scaffold	Health Canada	SAMN03799833	GCA_001280705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/705/GCA_001280705.1_ASM128070v1	-	HS-06-05
Enterococcus faecium	1352	PRJEB18536	356851	Terrabacteria group	Firmicutes	4.00862	37.1	-	FRYI01	2680	-	-	12/9/16	12/9/16	Contig	Moscow	SAMEA23865418	GCA_900148575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/575/GCA_900148575.1_Hp_22-10_05	-	-
Campylobacter coli	195	PRJEB11972	306128	Proteobacteria	delta/epsilon subdivisions	1.92874	31.2	-	FBOX01	378	2009	1774	12/17/15	3/19/17	Scaffold	INSTITUTE OF FOOD RESEARCH	SAMEA3683442	GCA_001498315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/498/315/GCA_001498315.1_H074360315	-	n/a
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.86822	64.1	-	FWDB01	19	4830	4676	3/16/17	3/24/17	Scaffold	SC	SAMEA2259570	GCA_900133545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/545/GCA_900133545.1_11861_8_4	-	765
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.0405	64.1	-	FVHM01	12	5053	4935	3/10/17	3/18/17	Scaffold	SC	SAMEA2259658	GCA_900133555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/555/GCA_900133555.1_11893_6_19	-	853
Campylobacter coli	195	PRJNA273685	273685	Proteobacteria	delta/epsilon subdivisions	1.67437	31.4	-	JXTV01	22	1738	1630	2/2/16	3/19/17	Scaffold	China CDC	SAMN03295190	GCA_001545275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/275/GCA_001545275.1_ASM154527v1	-	ZJ2013CCHD50
Enterococcus faecium	1352	PRJNA348753	348753	Terrabacteria group	Firmicutes	2.67507	38.2	-	DGKQ01	56	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06455503	GCA_002387065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/387/065/GCA_002387065.1_ASM238706v1	28894102	-
Vibrio parahaemolyticus	670	PRJNA288141	288141	Proteobacteria	Gammaproteobacteria	5.97635	44	-	LIRU01	82	5698	5420	9/9/15	9/9/15	Scaffold	Health Canada	SAMN03799838	GCA_001280725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/725/GCA_001280725.1_ASM128072v1	-	S176-10
Klebsiella pneumoniae	573	PRJNA259789	259789	Proteobacteria	Gammaproteobacteria	5.60207	57.3604	plasmid p38544-85.403kb:NZ_CP010362.1/CP010362.1	JWRM01	16	5727	5421	12/23/14	2/21/17	Contig	JCVI	SAMN03067421	GCA_000807475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/475/GCA_000807475.2_ASM80747v2	-	38544
Clostridioides difficile	1496	PRJEB6886	335808	Terrabacteria group	Firmicutes	4.18967	28.1	-	CCRW01	412	-	-	7/29/16	1/26/17	Scaffold	UOL	SAMEA2674820	GCA_900002545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/002/545/GCA_900002545.1_CD105HS7	-	-
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.54871	50.9	-	FTSL01	555	5157	4364	1/28/17	2/26/17	Scaffold	SC	SAMEA2054400	GCA_900157505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/505/GCA_900157505.1_9789_6_74	-	2090STDY5461788
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.0599	41.1	-	CECN01	58	2050	1955	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234119	GCA_000940195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/195/GCA_000940195.1_Velvet_assembly	-	V37N
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.11375	35.6	-	FJTO01	106	2166	2074	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888275	GCA_900074555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/555/GCA_900074555.1_mad3	-	-
Acinetobacter baumannii 42057_4	1311136	PRJNA195261	195261	Proteobacteria	Gammaproteobacteria	3.97922	39	-	JMHJ01	73	3904	3642	5/2/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02649524	GCA_000671675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/675/GCA_000671675.1_ASM67167v1	-	42057_4
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	7.44888	65.3	-	CTFK01	152	7273	7005	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296136	GCA_001374215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/215/GCA_001374215.1_287_10Pc_5_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15636	51.5	-	FEQP01	90	2501	2143	2/9/16	3/21/17	Scaffold	SC	SAMEA2674439	GCA_900038635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/635/GCA_900038635.1_14355_8_2	-	2842STDY5881727
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.06654	39.6	-	CMHT01	57	2262	2006	3/22/15	3/4/17	Contig	SC	SAMEA1029237	GCA_001116325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/325/GCA_001116325.1_7038_6_22	-	SMRU2998
Escherichia coli KTE199	1181745	PRJNA163411	163411	Proteobacteria	Gammaproteobacteria	5.42915	50.5	-	ASUL01	13	5603	5223	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00974054	GCA_000408165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/165/GCA_000408165.1_Esch_coli_KTE199_V1	-	KTE199
Mycobacterium tuberculosis M1381	1448666	PRJNA235677	235677	Terrabacteria group	Actinobacteria	4.42431	65.6	-	JKOA01	4	4275	4099	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599012	GCA_000662665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/665/GCA_000662665.1_Myco_tube_M1381_V1	-	M1381
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.97788	37.9	-	MDQH01	19	3050	2969	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410655	GCA_001710605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/605/GCA_001710605.1_ASM171060v1	-	Lm109
Campylobacter jejuni subsp. jejuni	32022	PRJNA290425	290425	Proteobacteria	delta/epsilon subdivisions	1.70399	30.3334	plasmid unnamed:NZ_CM007863.1/CM007863.1	MLDY01	19	1807	1710	4/26/17	5/6/17	Contig	University of Helsinki	SAMN05832010	GCA_002110835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/835/GCA_002110835.1_Cjejuni.CJ506CC21_v1.0	28408091	CJ506CC21
Salmonella enterica subsp. enterica serovar Typhimurium str. CDC_2009K1288	1262136	PRJNA41923	41923	Proteobacteria	Gammaproteobacteria	4.81409	52.2	-	AUQL01	47	4922	4578	10/17/13	2/26/17	Contig	FDA	SAMN01813475	GCA_000474335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/335/GCA_000474335.1_CFSAN001183_01.0	-	CDC_2009K1288
Staphylococcus aureus COAS6053	1409569	PRJNA223889	223889	Terrabacteria group	Firmicutes	2.86888	32.9	-	JBKW01	22	2989	2816	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381630	GCA_000540895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/895/GCA_000540895.1_Stap_aure_COAS6053_V1	-	COAS6053
Staphylococcus aureus SJUD6107	1409571	PRJNA223891	223891	Terrabacteria group	Firmicutes	2.82679	32.9	-	JBKU01	24	2943	2761	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381632	GCA_000540915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/915/GCA_000540915.1_Stap_aure_SJUD6107_V1	-	SJUD6107
Salmonella enterica subsp. enterica serovar Typhimurium str. CDC_2009K1283	891422	PRJNA53271	53271	Proteobacteria	Gammaproteobacteria	4.81742	52.2	-	AUQN01	46	4925	4653	10/17/13	2/26/17	Contig	FDA	SAMN01813487	GCA_000474355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/355/GCA_000474355.1_CFSAN001186_01.0	-	CDC_2009K1283
Campylobacter jejuni subsp. jejuni	32022	PRJNA290425	290425	Proteobacteria	delta/epsilon subdivisions	1.71767	30.3686	plasmid unnamed:NZ_CM007864.1/CM007864.1	MLDX01	12	1839	1746	4/26/17	5/6/17	Contig	University of Helsinki	SAMN05832009	GCA_002110885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/885/GCA_002110885.1_Cjejuni.CJ505CC21_v1.0	28408091	CJ505CC21
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.89524	37.9	-	MDQK01	17	2924	2848	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410757	GCA_001710615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/615/GCA_001710615.1_ASM171061v1	-	A8
Mycobacterium tuberculosis M1384	1448667	PRJNA235678	235678	Terrabacteria group	Actinobacteria	4.42234	65.6	-	JKNZ01	77	4322	4099	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599013	GCA_000662685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/685/GCA_000662685.1_Myco_tube_M1384_V1	-	M1384
Escherichia coli KTE200	1181746	PRJNA163413	163413	Proteobacteria	Gammaproteobacteria	5.26966	50.7	-	ASUM01	7	5436	5126	5/31/13	2/22/17	Scaffold	Broad Institute	SAMN00974055	GCA_000408185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/185/GCA_000408185.1_Esch_coli_KTE200_V1	-	KTE200
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07093	39.6	-	CKOS01	66	2274	2061	3/21/15	3/10/17	Contig	SC	SAMEA1025078	GCA_001116405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/405/GCA_001116405.1_6680_4_1	-	19F
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16972	51.5	-	FESK01	80	2530	2156	2/9/16	3/21/17	Scaffold	SC	SAMEA2673806	GCA_900038645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/645/GCA_900038645.1_14355_5_13	-	2842STDY5881066
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	7.35154	65.4	-	CTFN01	167	7122	6848	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296137	GCA_001374235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/235/GCA_001374235.1_288_12_5Pc_2_2_contigs_500	-	-
Acinetobacter baumannii 1451147	1310642	PRJNA194718	194718	Proteobacteria	Gammaproteobacteria	4.32115	38.6	-	JMNQ01	539	4443	3912	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692951	GCA_000681535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/535/GCA_000681535.1_ASM68153v1	-	1451147
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.11344	35.6	-	FJTU01	132	2171	2071	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888285	GCA_900074565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/565/GCA_900074565.1_mad35	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.042	41.1	-	CDUX01	55	2028	1919	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233851	GCA_000940375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/375/GCA_000940375.1_Velvet_assembly	-	F41Z
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.53851	50.8	-	FTSB01	372	5089	4317	1/28/17	2/26/17	Scaffold	SC	SAMEA2054151	GCA_900157525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/525/GCA_900157525.1_9789_6_18	-	2090STDY5461731
Clostridioides difficile	1496	PRJEB6886	335808	Terrabacteria group	Firmicutes	3.99515	28.6	-	CCRT01	193	3680	3483	7/29/16	8/3/17	Scaffold	UOL	SAMEA2674821	GCA_900002555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/002/555/GCA_900002555.1_CD105HS19	-	-
Klebsiella pneumoniae	573	PRJNA259789	259789	Proteobacteria	Gammaproteobacteria	5.50863	57.3952	plasmid p38547-1.476kb:NZ_CP010388.1/CP010388.1; plasmid p38547-2.496kb:NZ_CP010389.1/CP010389.1	JWRL01	19	5571	5309	12/23/14	2/21/17	Contig	JCVI	SAMN03067422	GCA_000807495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/495/GCA_000807495.2_ASM80749v2	-	38547
Vibrio parahaemolyticus VPCR-2010	1238224	PRJNA176659	176659	Proteobacteria	Gammaproteobacteria	6.08413	44.1	-	AVPW01	29	6190	5951	8/23/13	1/6/16	Contig	Institute for Genome Sciences University of MD School of Medicine	SAMN02435811	GCA_000454475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/454/475/GCA_000454475.1_ASM45447v1	-	VPCR-2010
Enterococcus faecium	1352	PRJEB18432	356030	Terrabacteria group	Firmicutes	3.71839	37.9	-	FREO01	1889	-	-	12/8/16	12/8/16	Scaffold	RCPCM	SAMEA18420418	GCA_900143465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/465/GCA_900143465.1_Hp_74-d6_05	-	-
Campylobacter coli	195	PRJNA271318	271318	Proteobacteria	delta/epsilon subdivisions	1.83145	31.1	-	JXAD01	58	1941	1812	2/2/16	3/19/17	Scaffold	China CDC	SAMN03273941	GCA_001545285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/285/GCA_001545285.1_ASM154528v1	-	ICDCCC-SHCCH11C314
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.03808	64.1	-	FWCZ01	19	5052	4939	3/16/17	3/24/17	Scaffold	SC	SAMEA2259659	GCA_900133565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/565/GCA_900133565.1_11893_6_20	-	854
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23215	64	-	FSDN01	21	5264	5144	12/14/16	3/21/17	Scaffold	SC	SAMEA2275671	GCA_900133575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/575/GCA_900133575.1_12082_5_56	-	949
Campylobacter coli	195	PRJNA273687	273687	Proteobacteria	delta/epsilon subdivisions	1.74776	31.3	-	JXTU01	32	1845	1727	2/2/16	3/19/17	Scaffold	China CDC	SAMN03295192	GCA_001545295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/295/GCA_001545295.1_ASM154529v1	-	SH-CCD12C136
Enterococcus faecium	1352	PRJEB18536	356851	Terrabacteria group	Firmicutes	3.71839	37.9	-	FRYG01	1889	-	-	12/9/16	12/9/16	Scaffold	Moscow	SAMEA23872918	GCA_900148655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/655/GCA_900148655.1_Hp_74-d6_05	-	-
Vibrio parahaemolyticus VIP4-0445	1408167	PRJNA222556	222556	Proteobacteria	Gammaproteobacteria	4.96658	45.3	-	AXNL01	908	-	-	11/29/13	1/8/14	Contig	The Chinese University of Hong Kong	SAMN02471129	GCA_000500385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/385/GCA_000500385.1_VIP4-0445	-	VIP4-0445
Klebsiella pneumoniae	573	PRJNA259791	259791	Proteobacteria	Gammaproteobacteria	5.70581	57.1075	plasmid p6234-178.193kb:NZ_CP010391.1/CP010391.1; plasmid p6234-198.371kb:NZ_CP010390.1/CP010390.1	JWRK01	5	5776	5475	12/23/14	2/21/17	Contig	JCVI	SAMN03255440	GCA_000807515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/515/GCA_000807515.2_ASM80751v2	-	6234
Clostridioides difficile	1496	PRJEB8573	375909	Terrabacteria group	Firmicutes	4.15346	28.6	-	CUWT01	46	3861	3714	2/19/17	2/23/17	Scaffold	UOL	SAMEA3257605	GCA_900005755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/005/755/GCA_900005755.1_CD05HE1_ppCDHM1	-	-
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.62277	50.5	-	FTTS01	408	5197	4378	1/28/17	2/26/17	Scaffold	SC	SAMEA2054154	GCA_900157535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/535/GCA_900157535.1_9789_6_20	-	2090STDY5461734
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03774	41.2	-	CDVC01	57	2022	1920	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233854	GCA_000940395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/395/GCA_000940395.1_Velvet_assembly	-	F48A
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.13907	35.5	-	FJTV01	100	2183	2097	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888286	GCA_900074575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/575/GCA_900074575.1_mad40	-	-
Acinetobacter baumannii 855125	1310661	PRJNA194737	194737	Proteobacteria	Gammaproteobacteria	4.40128	38.9	-	JMNT01	441	4349	4016	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692967	GCA_000681555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/555/GCA_000681555.1_ASM68155v1	-	855125
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	7.06311	65.6	-	CUYD01	259	6812	6515	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296138	GCA_001374255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/255/GCA_001374255.1_289_15Pc_1_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16761	51.6	-	FFDN01	80	2525	2173	2/9/16	3/19/17	Scaffold	SC	SAMEA2674235	GCA_900038655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/655/GCA_900038655.1_14555_6_41	-	2842STDY5881478
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12983	39.4	-	CNTS02	162	2287	2076	3/22/15	3/11/17	Contig	SC	SAMEA1032504	GCA_001116425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/425/GCA_001116425.2_6999_5_11	-	173015
Escherichia coli KTE219	1181765	PRJNA163451	163451	Proteobacteria	Gammaproteobacteria	5.2207	50.6	-	ASUN01	6	5377	5000	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00974074	GCA_000408205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/205/GCA_000408205.1_Esch_coli_KTE219_V1	-	KTE219
Mycobacterium tuberculosis M1389	1448668	PRJNA235679	235679	Terrabacteria group	Actinobacteria	4.44568	65.5	-	JKNY01	3	4282	4099	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599014	GCA_000662705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/705/GCA_000662705.1_Myco_tube_M1389_V1	-	M1389
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.97724	37.9	-	MDQM01	20	3050	2970	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410784	GCA_001710635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/635/GCA_001710635.1_ASM171063v1	-	A549-2
Campylobacter jejuni subsp. jejuni	32022	PRJNA290425	290425	Proteobacteria	delta/epsilon subdivisions	1.66355	30.3303	plasmid unnamed:NZ_CM007865.1/CM007865.1	MLDZ01	21	1737	1650	4/26/17	5/6/17	Contig	University of Helsinki	SAMN05832002	GCA_002110905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/905/GCA_002110905.1_Cjejuni.CJ097CC21_v1.0	28408091	CJ097CC21
Salmonella enterica subsp. enterica serovar Newport str. #11-2	1127355	PRJNA78363	78363	Proteobacteria	Gammaproteobacteria	4.76894	52.1	-	AUQR01	54	4876	4619	10/17/13	2/26/17	Contig	FDA	SAMN01816172	GCA_000474375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/375/GCA_000474375.1_CFSAN001193_01.0	-	#11-2
Staphylococcus aureus SJUD6111	1409572	PRJNA223892	223892	Terrabacteria group	Firmicutes	2.85803	32.8	-	JBKT01	16	3005	2842	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381633	GCA_000540935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/935/GCA_000540935.1_Stap_aure_SJUD6111_V1	-	SJUD6111
Staphylococcus aureus SJUD6110	1409573	PRJNA223893	223893	Terrabacteria group	Firmicutes	2.93836	32.8	-	JBKS01	12	3114	2964	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381634	GCA_000540955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/955/GCA_000540955.1_Stap_aure_SJUD6110_V1	-	SJUD6110
Salmonella enterica subsp. enterica serovar Typhimurium str. 35423	1124972	PRJNA78373	78373	Proteobacteria	Gammaproteobacteria	5.1256	52	-	AUQU01	72	5322	5079	10/17/13	2/26/17	Contig	FDA	SAMN01814035	GCA_000474395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/395/GCA_000474395.1_CFSAN001199_01.0	-	35423
Campylobacter jejuni subsp. jejuni	32022	PRJNA290425	290425	Proteobacteria	delta/epsilon subdivisions	1.78961	30.3698	plasmid unnamed:NZ_CM007866.1/CM007866.1	MLDW01	26	1938	1832	4/26/17	5/6/17	Contig	University of Helsinki	SAMN05832008	GCA_002111525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/525/GCA_002111525.1_Cjejuni.CJ504CC21_v1.0	28408091	CJ504CC21
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.97989	37.9	-	MDQL01	31	3050	2963	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410834	GCA_001710655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/655/GCA_001710655.1_ASM171065v1	-	A554
Mycobacterium tuberculosis M1392	1448669	PRJNA235680	235680	Terrabacteria group	Actinobacteria	4.43346	65.5	-	JKNX01	6	4279	4100	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599015	GCA_000662725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/725/GCA_000662725.1_Myco_tube_M1392_V1	-	M1392
Escherichia coli KTE221	1181767	PRJNA163455	163455	Proteobacteria	Gammaproteobacteria	5.13944	50.6	-	ASUO01	18	5251	4928	5/31/13	2/22/17	Scaffold	Broad Institute	SAMN00974076	GCA_000408225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/225/GCA_000408225.1_Esch_coli_KTE221_V1	-	KTE221
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.04775	39.7	-	CMMF01	55	2238	2029	3/23/15	3/11/17	Contig	SC	SAMEA1029416	GCA_001116465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/465/GCA_001116465.1_7054_6_9	-	SMRU3081
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12798	51.7	-	FFBK01	74	2483	2163	2/9/16	3/19/17	Scaffold	SC	SAMEA2674299	GCA_900038675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/675/GCA_900038675.1_14555_5_80	-	2842STDY5881421
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.69546	65.9	-	CUYC01	113	6450	6249	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296139	GCA_001374275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/275/GCA_001374275.1_290_15_111B_contigs_500	-	-
Acinetobacter baumannii 21072	1310697	PRJNA194773	194773	Proteobacteria	Gammaproteobacteria	4.17688	38.9	-	JMOD01	368	4271	3735	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692972	GCA_000681575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/575/GCA_000681575.1_ASM68157v1	-	21072
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.16722	35.5	-	FJUA01	114	2212	2113	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888287	GCA_900074585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/585/GCA_900074585.1_mad42	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05865	41.1	-	CEAY01	59	2050	1953	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234112	GCA_000940475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/475/GCA_000940475.1_Velvet_assembly	-	V34L
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.64853	50.9	-	FTSH01	576	5263	4485	1/28/17	2/26/17	Scaffold	SC	SAMEA2054228	GCA_900157545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/545/GCA_900157545.1_9789_6_39	-	2090STDY5461753
Clostridioides difficile	1496	PRJEB6886	335808	Terrabacteria group	Firmicutes	4.15349	28.7	-	CCRR01	254	3884	3459	7/29/16	4/21/17	Scaffold	UOL	SAMEA2674814	GCA_900006345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/006/345/GCA_900006345.1_CD105HS1	-	-
Klebsiella pneumoniae JT4	1451263	PRJNA234337	234337	Proteobacteria	Gammaproteobacteria	5.85816	56.8	-	JAPZ01	355	6012	5651	12/29/14	2/21/17	Contig	The Singapore Centre on Environmental Life Sciences Engineering	SAMN03273576	GCA_000809125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/125/GCA_000809125.1_ASM80912v1	-	JT4
Vibrio parahaemolyticus VIP4-0443	1408171	PRJNA222560	222560	Proteobacteria	Gammaproteobacteria	4.87271	45.3	-	AXNP01	1156	-	-	11/29/13	1/8/14	Contig	The Chinese University of Hong Kong	SAMN02471136	GCA_000500465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/465/GCA_000500465.1_VIP4-0443	-	VIP4-0443
Campylobacter coli	195	PRJNA293494	293494	Proteobacteria	delta/epsilon subdivisions	1.84005	31.2	-	LISB01	62	1964	1819	2/2/16	3/19/17	Scaffold	China CDC	SAMN04004258	GCA_001545335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/335/GCA_001545335.1_ASM154533v1	-	SH-CCH11C605
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.9203	64.1	-	FWCN01	12	4894	4733	3/16/17	3/24/17	Scaffold	SC	SAMEA2259674	GCA_900133585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/585/GCA_900133585.1_11893_6_33	-	869
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.84628	64.2	-	FVHU01	12	4862	4722	3/10/17	3/18/17	Scaffold	SC	SAMEA2259691	GCA_900133595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/595/GCA_900133595.1_11893_6_48	-	886
Campylobacter coli	195	PRJNA293491	293491	Proteobacteria	delta/epsilon subdivisions	1.75695	31.2	-	LIRY01	32	1839	1696	2/2/16	3/19/17	Scaffold	China CDC	SAMN04004255	GCA_001545345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/345/GCA_001545345.1_ASM154534v1	-	SH-CCH11C311
Vibrio parahaemolyticus VP49	1435358	PRJNA231232	231232	Proteobacteria	Gammaproteobacteria	5.04782	45.3	-	JEMS01	137	4629	2668	5/1/14	7/7/14	Contig	"Department of Fisheries Microbiology, Karnataka Veterinary, Animal and Fisheries Sciences University, College of Fisheries, Kankanady, Mangalore, Karnataka 575002, India"	SAMN02666028	GCA_000662375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/375/GCA_000662375.1_De_novo_assembly_of_VP49_genome	24970827	VP49
Klebsiella pneumoniae	573	PRJNA270001	270001	Proteobacteria	Gammaproteobacteria	5.67612	56.8	-	JWPY01	160	5731	5457	12/31/14	2/21/17	Contig	University of Malaya	SAMN03261529	GCA_000812525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/525/GCA_000812525.1_ASM81252v1	-	GN8
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.11333	28.6	-	FULX01	32	3842	3668	2/14/17	2/23/17	Scaffold	SC	SAMEA3375088	GCA_900164015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/015/GCA_900164015.1_16780_8_22	-	VRECD0132
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.65251	50.7	-	FTSF01	462	5215	4471	1/28/17	2/26/17	Scaffold	SC	SAMEA2054243	GCA_900157555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/555/GCA_900157555.1_9789_6_58	-	2090STDY5461772
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.07001	41.1	-	CEAW01	59	2059	1963	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234111	GCA_000940495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/495/GCA_000940495.1_Velvet_assembly	-	V33K
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.13718	35.5	-	FJUB01	105	2187	2097	9/30/16	3/21/17	Contig	INSTITUT PASTEUR	SAMEA3888288	GCA_900074595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/595/GCA_900074595.1_mad43	-	-
Acinetobacter baumannii 1505311	1310806	PRJNA194882	194882	Proteobacteria	Gammaproteobacteria	4.14221	39.1	-	JMOL01	118	4136	3868	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692976	GCA_000681595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/595/GCA_000681595.1_ASM68159v1	-	1505311
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.62497	66.2	-	CUYB01	125	6380	6184	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296140	GCA_001374295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/295/GCA_001374295.1_291_15_211Ba_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.1264	51.7	-	FFBX01	90	2486	2168	2/9/16	3/19/17	Scaffold	SC	SAMEA2674327	GCA_900039285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/285/GCA_900039285.1_14555_5_93	-	2842STDY5881434
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00215	39.7	-	CNWN02	132	2145	1958	3/22/15	3/11/17	Contig	SC	SAMEA1032462	GCA_001116545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/545/GCA_001116545.2_7001_1_6	-	R34-3083
Escherichia coli KTE222	1181768	PRJNA163457	163457	Proteobacteria	Gammaproteobacteria	4.95881	50.8	-	ASUP01	3	5036	4723	5/31/13	2/22/17	Scaffold	Broad Institute	SAMN00974077	GCA_000408245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/245/GCA_000408245.1_Esch_coli_KTE222_V1	-	KTE222
Mycobacterium tuberculosis M1393	1448670	PRJNA235681	235681	Terrabacteria group	Actinobacteria	4.43361	65.5	-	JKNW01	5	4286	4089	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599016	GCA_000662745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/745/GCA_000662745.1_Myco_tube_M1393_V1	-	M1393
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.91972	37.9	-	MDQO01	18	2989	2903	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410814	GCA_001710685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/685/GCA_001710685.1_ASM171068v1	-	A542
Campylobacter jejuni	197	PRJDB5560	376730	Proteobacteria	delta/epsilon subdivisions	1.6909	30.2	-	BDRZ01	61	1760	1619	4/28/17	5/9/17	Contig	"Division of Biomedical Food Research, NIHS"	SAMD00078611	GCA_002118115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/118/115/GCA_002118115.1_Cjejuni_1.0	-	CAM970
Salmonella enterica subsp. enterica serovar Kentucky str. 13562	1124950	PRJNA78331	78331	Proteobacteria	Gammaproteobacteria	4.8108	52	-	AUQF01	127	4891	4545	10/17/13	2/26/17	Contig	FDA	SAMN01816163	GCA_000474415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/415/GCA_000474415.1_CFSAN001162_01.0	-	13562
Staphylococcus aureus SJOS6126	1409574	PRJNA223894	223894	Terrabacteria group	Firmicutes	2.94906	32.9	-	JBKR01	31	3105	2918	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381635	GCA_000540975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/975/GCA_000540975.1_Stap_aure_SJOS6126_V1	-	SJOS6126
Staphylococcus aureus SJUD6101	1409576	PRJNA223896	223896	Terrabacteria group	Firmicutes	2.83583	32.8	-	JBKQ01	23	2943	2773	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381637	GCA_000540995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/540/995/GCA_000540995.1_Stap_aure_SJUD6101_V1	-	SJUD6101
Salmonella enterica subsp. enterica serovar Kentucky str. 29166	1124951	PRJNA78333	78333	Proteobacteria	Gammaproteobacteria	4.99609	51.9	-	AUQG01	190	5140	4748	10/17/13	2/26/17	Contig	FDA	SAMN01816164	GCA_000474435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/435/GCA_000474435.1_CFSAN001163_01.0	-	29166
Campylobacter jejuni	197	PRJNA379389	379389	Proteobacteria	delta/epsilon subdivisions	1.9119	30.1	-	NAAF01	79	2010	1826	5/9/17	5/22/17	Contig	Uppsala University	SAMN06606980	GCA_002120145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/145/GCA_002120145.1_ASM212014v1	-	VA12
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.92685	37.9	-	MDQI01	17	2954	2881	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410831	GCA_001710705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/705/GCA_001710705.1_ASM171070v1	-	C5
Mycobacterium tuberculosis M1397	1448671	PRJNA235682	235682	Terrabacteria group	Actinobacteria	4.38271	65.6	-	JKNV01	85	4329	4117	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599017	GCA_000662765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/765/GCA_000662765.1_Myco_tube_M1397_V1	-	M1397
Escherichia coli KTE225	1181771	PRJNA163463	163463	Proteobacteria	Gammaproteobacteria	5.29628	50.6	-	ASUQ01	11	5484	5151	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00974080	GCA_000408265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/265/GCA_000408265.1_Esch_coli_KTE225_V1	-	KTE225
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.08741	39.6	-	CKJS01	52	2286	2061	3/21/15	3/11/17	Contig	SC	SAMEA1023763	GCA_001116585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/585/GCA_001116585.1_6631_6_1	-	14
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16624	51.6	-	FFDP01	72	2481	2158	2/9/16	3/19/17	Scaffold	SC	SAMEA2674239	GCA_900039295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/295/GCA_900039295.1_14555_6_43	-	2842STDY5881480
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.68111	66.3	-	CUYE01	86	6422	6254	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296141	GCA_001374315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/315/GCA_001374315.1_292_15_321Ga_contigs_500	-	-
Acinetobacter baumannii 25569_10	1311117	PRJNA195239	195239	Proteobacteria	Gammaproteobacteria	3.99969	39	-	JMNO01	70	3878	3623	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02649424	GCA_000681615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/615/GCA_000681615.1_ASM68161v1	-	25569_10
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.13846	35.5	-	FJUC01	100	2185	2098	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888289	GCA_900074605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/605/GCA_900074605.1_mad44	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05891	41.1	-	CDVV01	57	2053	1962	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233800	GCA_000940595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/595/GCA_000940595.1_Velvet_assembly	-	B46W
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.81668	50.5	-	FTSQ01	465	5433	4630	1/28/17	2/26/17	Scaffold	SC	SAMEA2054239	GCA_900157565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/565/GCA_900157565.1_9789_6_53	-	2090STDY5461767
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.13905	28.7	-	FULN01	27	3831	3673	2/14/17	2/23/17	Scaffold	SC	SAMEA3375079	GCA_900164025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/025/GCA_900164025.1_16780_8_13	-	VRECD0043
Klebsiella pneumoniae	573	PRJEB7075	264888	Proteobacteria	Gammaproteobacteria	5.50943	57.2	-	CCVM01	154	5497	5258	10/26/14	2/21/17	Contig	Universite d'Auvergne	SAMEA2738239	GCA_000820445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/820/445/GCA_000820445.1_KPLM21	-	-
Vibrio parahaemolyticus	670	PRJNA253068	253068	Proteobacteria	Gammaproteobacteria	5.38884	45.3	-	JOKE01	290	4902	4029	8/4/14	8/26/15	Contig	University of Arizona	SAMN02866418	GCA_000737635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/635/GCA_000737635.1_ASM73763v1	-	13-028/A3
Campylobacter coli	195	PRJNA293493	293493	Proteobacteria	delta/epsilon subdivisions	1.7865	31.3	-	LISA01	43	1868	1750	2/2/16	3/19/17	Scaffold	China CDC	SAMN04004257	GCA_001545355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/355/GCA_001545355.1_ASM154535v1	-	SH-CCH11C390
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.0176	64.2	-	FVIB01	13	5066	4930	3/10/17	3/18/17	Scaffold	SC	SAMEA2275654	GCA_900133605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/605/GCA_900133605.1_12082_5_55	-	932
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.86935	64.2	-	FVIA01	6	4900	4765	3/10/17	3/18/17	Scaffold	SC	SAMEA2275672	GCA_900133615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/615/GCA_900133615.1_12082_5_57	-	950
Campylobacter coli	195	PRJNA293492	293492	Proteobacteria	delta/epsilon subdivisions	1.8317	31.2	-	LIRZ01	50	1938	1805	2/2/16	3/19/17	Scaffold	China CDC	SAMN04004256	GCA_001545365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/365/GCA_001545365.1_ASM154536v1	-	SH-CCH11C334
Vibrio parahaemolyticus	670	PRJNA253079	253079	Proteobacteria	Gammaproteobacteria	5.00777	45.4	-	JPIP01	1940	4575	2624	11/7/14	11/7/14	Contig	"College of Fisheries, Karnataka Veterinary, Animal and Fisheries Sciences University"	SAMN02866458	GCA_000773455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/455/GCA_000773455.1_ASM77345v1	-	VPA-67
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.42666	57.4	-	CCEX01	89	5541	5220	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602906	GCA_000821365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/365/GCA_000821365.1_100SGR	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.17486	28.3	-	FULG01	36	3890	3694	2/14/17	2/23/17	Scaffold	SC	SAMEA3375092	GCA_900164055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/055/GCA_900164055.1_16780_8_26	-	VRECD0136
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.75779	50.7	-	FTSK01	434	5333	4595	1/28/17	2/26/17	Scaffold	SC	SAMEA2054397	GCA_900157575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/575/GCA_900157575.1_9789_6_71	-	2090STDY5461785
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05039	41.2	-	CDTB01	71	2050	1946	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233774	GCA_000940635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/635/GCA_000940635.1_Velvet_assembly	-	B28P
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.13898	35.5	-	FJUE01	104	2184	2096	9/30/16	3/21/17	Contig	INSTITUT PASTEUR	SAMEA3888290	GCA_900074615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/615/GCA_900074615.1_mad53	-	-
Acinetobacter baumannii 1195185_80	1310826	PRJNA194902	194902	Proteobacteria	Gammaproteobacteria	4.26352	39.1	-	JMOI01	99	4231	3972	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692957	GCA_000681635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/635/GCA_000681635.1_ASM68163v1	-	1195185_80
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	7.02065	65.8	-	CUYG01	218	6784	6533	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296142	GCA_001374335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/335/GCA_001374335.1_293_Tsb_Bead_Dwl_Pool_2_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15322	51.6	-	FERI01	79	2502	2174	2/9/16	3/19/17	Scaffold	SC	SAMEA2673903	GCA_900039425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/425/GCA_900039425.1_14355_4_43	-	2842STDY5881000
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08514	39.7	-	CKPJ01	86	2300	2091	3/21/15	3/11/17	Contig	SC	SAMEA1024580	GCA_001116605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/605/GCA_001116605.1_6680_5_18	-	SMRU930
Escherichia coli KTE226	1181772	PRJNA163465	163465	Proteobacteria	Gammaproteobacteria	5.13654	50.5	-	ASUR01	18	5237	4905	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00974081	GCA_000408285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/285/GCA_000408285.1_Esch_coli_KTE226_V1	-	KTE226
Mycobacterium tuberculosis M1400	1448672	PRJNA235683	235683	Terrabacteria group	Actinobacteria	4.41513	65.6	-	JKNU01	9	4279	4090	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599018	GCA_000662785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/785/GCA_000662785.1_Myco_tube_M1400_V1	-	M1400
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.96998	37.9	-	MDQE01	23	3011	2928	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410699	GCA_001710715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/715/GCA_001710715.1_ASM171071v1	-	Lm212
Campylobacter jejuni subsp. jejuni	32022	PRJNA379389	379389	Proteobacteria	delta/epsilon subdivisions	1.69686	30.4902	plasmid unnamed:NZ_CM007888.1/CM007888.1	NAAE01	48	1786	1649	5/9/17	5/22/17	Contig	Uppsala University	SAMN06606886	GCA_002120155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/155/GCA_002120155.1_ASM212015v1	-	VA1
Salmonella enterica subsp. enterica serovar Kentucky str. 20793	1124954	PRJNA78339	78339	Proteobacteria	Gammaproteobacteria	4.87352	52	-	AUQJ01	96	4935	4636	10/17/13	2/26/17	Contig	FDA	SAMN01816167	GCA_000474455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/455/GCA_000474455.1_CFSAN001166_01.0	-	20793
Staphylococcus aureus SJUD6109	1409577	PRJNA223897	223897	Terrabacteria group	Firmicutes	2.91538	32.8	-	JBKP01	28	3066	2897	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381638	GCA_000541015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/015/GCA_000541015.1_Stap_aure_SJUD6109_V1	-	SJUD6109
Staphylococcus aureus MISS6119	1409578	PRJNA223898	223898	Terrabacteria group	Firmicutes	2.96369	32.7	-	JBKO01	13	3150	2988	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381639	GCA_000541035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/035/GCA_000541035.1_Stap_aure_MISS6119_V1	-	MISS6119
Salmonella enterica subsp. enterica serovar Typhimurium str. CDC_2009K1158	891421	PRJNA53269	53269	Proteobacteria	Gammaproteobacteria	4.81757	52.2	-	AUQM01	45	4929	4663	10/17/13	2/26/17	Contig	FDA	SAMN01813486	GCA_000474475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/475/GCA_000474475.1_CFSAN001184_01.0	-	CDC_2009K1158
Campylobacter jejuni	197	PRJNA379389	379389	Proteobacteria	delta/epsilon subdivisions	1.65707	30.4829	plasmid unnamed1:NZ_CM007884.1/CM007884.1; plasmid unnamed2:NZ_CM007885.1/CM007885.1	NAAG01	37	1736	1612	5/9/17	5/22/17	Contig	Uppsala University	SAMN06607039	GCA_002120165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/165/GCA_002120165.1_ASM212016v1	-	VA25
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.91979	37.9	-	MDQQ01	18	2982	2904	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410810	GCA_001710725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/725/GCA_001710725.1_ASM171072v1	-	A529
Mycobacterium tuberculosis M1402	1448673	PRJNA235684	235684	Terrabacteria group	Actinobacteria	4.42227	65.6	-	JKNT01	6	4280	4099	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599019	GCA_000662805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/805/GCA_000662805.1_Myco_tube_M1402_V1	-	M1402
Escherichia coli KTE240	1181782	PRJNA163485	163485	Proteobacteria	Gammaproteobacteria	4.98704	50.6	-	ASUS01	6	5092	4781	5/31/13	2/22/17	Scaffold	Broad Institute	SAMN00974091	GCA_000408305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/305/GCA_000408305.1_Esch_coli_KTE240_V1	-	KTE240
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08523	39.6	-	CNOW02	132	2279	2069	3/23/15	3/5/17	Contig	SC	SAMEA1032590	GCA_001116665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/665/GCA_001116665.2_6930_8_7	-	R34-3013
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.1646	51.5	-	FERC01	83	2522	2170	2/9/16	3/21/17	Scaffold	SC	SAMEA2673878	GCA_900039435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/435/GCA_900039435.1_14355_4_35	-	2842STDY5880992
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.45612	66.4	-	CTFM01	89	6136	5972	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296143	GCA_001374355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/355/GCA_001374355.1_294_Rw130_contigs_500	-	-
Acinetobacter baumannii 25691_5	1310929	PRJNA195006	195006	Proteobacteria	Gammaproteobacteria	4.04558	38.8	-	JMOV01	197	4066	3786	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692984	GCA_000681655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/655/GCA_000681655.1_ASM68165v1	-	25691_5
Streptococcus agalactiae	1311	PRJEB12926	344989	Terrabacteria group	Firmicutes	2.13917	35.5	-	FJUD01	96	2185	2094	9/30/16	3/20/17	Contig	INSTITUT PASTEUR	SAMEA3888291	GCA_900074655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/655/GCA_900074655.1_mad60	-	-
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.08158	41.1	-	CDWY01	62	2064	1957	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233865	GCA_000940715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/715/GCA_000940715.1_Velvet_assembly	-	F5F
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.53622	50.8	-	FTSS01	408	5050	4318	1/28/17	2/26/17	Scaffold	SC	SAMEA2054391	GCA_900157585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/585/GCA_900157585.1_9789_6_65	-	2090STDY5461779
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.17272	28.6	-	FULJ01	31	3979	3808	2/14/17	2/23/17	Scaffold	SC	SAMEA3375086	GCA_900164065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/065/GCA_900164065.1_16780_8_20	-	VRECD0130
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.65438	57.2	-	CCEY01	229	5892	5512	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602907	GCA_000821385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/385/GCA_000821385.1_101BO	-	-
Vibrio parahaemolyticus	670	PRJNA288141	288141	Proteobacteria	Gammaproteobacteria	6.05216	44	-	LFZA01	208	5835	5544	8/18/15	8/18/15	Contig	Health Canada	SAMN03799841	GCA_001270155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/155/GCA_001270155.1_ASM127015v1	-	S439-9
Campylobacter coli	195	PRJNA293495	293495	Proteobacteria	delta/epsilon subdivisions	1.81263	31.2	-	LISC01	52	1912	1785	2/2/16	3/19/17	Scaffold	China CDC	SAMN04004259	GCA_001545415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/415/GCA_001545415.1_ASM154541v1	-	SH-CCF11C627
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.89108	64.2	-	FSDP01	12	4891	4749	12/14/16	3/21/17	Scaffold	SC	SAMEA2275658	GCA_900133645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/645/GCA_900133645.1_12163_1_14	-	936
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.00525	64.2	-	FSDO01	17	4988	4841	12/14/16	3/21/17	Scaffold	SC	SAMEA2275653	GCA_900133655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/655/GCA_900133655.1_12163_1_10	-	931
Campylobacter coli	195	PRJNA293497	293497	Proteobacteria	delta/epsilon subdivisions	1.70318	31.4	-	LISD01	36	1767	1661	2/2/16	3/19/17	Scaffold	China CDC	SAMN04004261	GCA_001545425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/425/GCA_001545425.1_ASM154542v1	-	SH-CCD11C671
Vibrio parahaemolyticus	670	PRJNA245882	245882	Proteobacteria	Gammaproteobacteria	6.02328	44	-	LHQV01	63	5767	5535	3/28/17	4/7/17	Contig	FDA/CFSAN	SAMN03945127	GCA_002072915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/915/GCA_002072915.1_VP43-1A	28330888	CFSAN001621
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.73217	57.1	-	CCFM01	224	5966	5603	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602908	GCA_000821405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/405/GCA_000821405.1_102BO	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.06957	28.4	-	FULQ01	27	3829	3662	2/14/17	2/23/17	Scaffold	SC	SAMEA3375080	GCA_900164075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/075/GCA_900164075.1_16780_8_14	-	VRECD0124
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.63567	50.8	-	FTSC01	407	5115	4442	1/28/17	2/26/17	Scaffold	SC	SAMEA2054244	GCA_900157595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/595/GCA_900157595.1_9789_6_59	-	2090STDY5461773
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04666	41.1	-	CDWR01	62	2041	1926	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233858	GCA_000941135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/135/GCA_000941135.1_Velvet_assembly	-	F50I
Streptococcus agalactiae LMG 14838	1154861	PRJNA86381	86381	Terrabacteria group	Firmicutes	2.32913	35.3	-	ALRW01	85	2436	2259	8/15/12	3/15/17	Scaffold	The J. Craig Venter Institute	SAMN00993350	GCA_000287995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/995/GCA_000287995.1_ASM28799v1	-	LMG 14838
Acinetobacter baumannii 24860_9	1310843	PRJNA194919	194919	Proteobacteria	Gammaproteobacteria	4.12656	39.2	-	JMOQ01	104	4080	3823	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692981	GCA_000681675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/675/GCA_000681675.1_ASM68167v1	-	24860_9
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.57613	66.3	-	CUYF01	59	6240	6077	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296144	GCA_001374375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/375/GCA_001374375.1_295_Rw176_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12878	51.7	-	FETV01	63	2494	2159	2/9/16	3/19/17	Scaffold	SC	SAMEA2673778	GCA_900039445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/445/GCA_900039445.1_14355_6_4	-	2842STDY5881153
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.18276	39.6	-	CKHD01	65	2423	2188	3/21/15	3/10/17	Contig	SC	SAMEA1023705	GCA_001116725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/725/GCA_001116725.1_6631_1_8	-	23A
Escherichia coli KTE61	1182668	PRJNA164879	164879	Proteobacteria	Gammaproteobacteria	5.02916	50.6	-	ASUU01	10	5109	4783	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00854620	GCA_000408345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/345/GCA_000408345.1_Esch_coli_KTE61_V1	-	KTE61
Mycobacterium tuberculosis M1404	1448674	PRJNA235685	235685	Terrabacteria group	Actinobacteria	4.41458	65.6	-	JKNS01	6	4276	4099	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599020	GCA_000662825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/825/GCA_000662825.1_Myco_tube_M1404_V1	-	M1404
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.91213	37.9	-	MDPD01	28	2983	2891	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410647	GCA_001710755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/755/GCA_001710755.1_ASM171075v1	-	Lm96
Campylobacter jejuni	197	PRJNA379389	379389	Proteobacteria	delta/epsilon subdivisions	1.72118	30.4886	plasmid unnamed1:NZ_CM007886.1/CM007886.1; plasmid unnamed2:NZ_CM007887.1/CM007887.1	NAAH01	22	1796	1681	5/9/17	5/22/17	Contig	Uppsala University	SAMN06607487	GCA_002120285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/285/GCA_002120285.1_ASM212028v1	-	VA52
Salmonella enterica subsp. enterica serovar Typhimurium str. CDC_2009K1277	891423	PRJNA53273	53273	Proteobacteria	Gammaproteobacteria	4.87993	52.2	-	AUQO01	89	4998	4766	10/17/13	2/26/17	Contig	FDA	SAMN01813488	GCA_000474495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/495/GCA_000474495.1_CFSAN001187_01.0	-	CDC_2009K1277
Staphylococcus aureus SMMC6076	1409579	PRJNA223899	223899	Terrabacteria group	Firmicutes	2.94089	32.9	-	JBKN01	20	3101	2927	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381640	GCA_000541055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/055/GCA_000541055.1_Stap_aure_SMMC6076_V1	-	SMMC6076
Staphylococcus aureus COAS6055	1409580	PRJNA223900	223900	Terrabacteria group	Firmicutes	2.93192	32.7	-	JBKM01	17	3092	2922	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381641	GCA_000541075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/075/GCA_000541075.1_Stap_aure_COAS6055_V1	-	COAS6055
Salmonella enterica subsp. enterica serovar Newport str. #11-4	1127353	PRJNA78359	78359	Proteobacteria	Gammaproteobacteria	4.76808	52.1	-	AUQP01	61	4873	4609	10/17/13	2/26/17	Contig	FDA	SAMN01816170	GCA_000474515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/515/GCA_000474515.1_CFSAN001191_01.0	-	#11-4
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.7416	30.3	-	NHQU01	120	1846	1742	6/5/17	6/7/17	Contig	Swansea University	SAMN07158751	GCA_002168235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/168/235/GCA_002168235.1_ASM216823v1	28493321	H14
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.87833	37.9	-	MDPU01	23	2898	2814	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410690	GCA_001710785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/785/GCA_001710785.1_ASM171078v1	-	Lm191
Mycobacterium tuberculosis M1410	1448675	PRJNA235686	235686	Terrabacteria group	Actinobacteria	4.42786	65.5	-	JKNR01	6	4295	4100	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599021	GCA_000662845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/845/GCA_000662845.1_Myco_tube_M1410_V1	-	M1410
Escherichia coli KTE64	1182671	PRJNA164885	164885	Proteobacteria	Gammaproteobacteria	5.26696	50.7	-	ASUV01	15	5482	5015	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00854623	GCA_000408365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/365/GCA_000408365.1_Esch_coli_KTE64_V1	-	KTE64
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05254	39.5	-	CNTI02	163	2234	2023	3/23/15	3/11/17	Contig	SC	SAMEA1032496	GCA_001116765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/765/GCA_001116765.2_6999_4_16	-	120581
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.21345	51.5	-	FEQT01	80	2601	2215	2/9/16	3/21/17	Scaffold	SC	SAMEA2674466	GCA_900039585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/585/GCA_900039585.1_14355_8_16	-	2842STDY5881741
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.77764	65.9	-	CTFO01	79	6583	6421	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296145	GCA_001374395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/395/GCA_001374395.1_296_Rw204_contigs_500	-	-
Acinetobacter baumannii 23037	1310584	PRJNA194660	194660	Proteobacteria	Gammaproteobacteria	4.13435	38.9	-	JMOC01	244	4178	3857	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692963	GCA_000681695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/695/GCA_000681695.1_ASM68169v1	-	23037
Streptococcus agalactiae MRI Z1-212	1154875	PRJNA86409	86409	Terrabacteria group	Firmicutes	2.12781	35.4	-	ALSC01	25	2189	2054	8/15/12	3/15/17	Scaffold	The J. Craig Venter Institute	SAMN00993317	GCA_000288015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/015/GCA_000288015.1_ASM28801v1	-	MRI Z1-212
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.07688	41.2	-	CDXI01	55	2076	1983	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234039	GCA_000941175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/175/GCA_000941175.1_Velvet_assembly	-	S2Q
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.70854	50.9	-	FTTO01	427	5309	4530	1/28/17	3/2/17	Scaffold	SC	SAMEA2054403	GCA_900157625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/625/GCA_900157625.1_9789_6_77	-	2090STDY5461791
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.2915	28.5	-	FULY01	33	4080	3869	2/14/17	2/23/17	Scaffold	SC	SAMEA3375097	GCA_900164085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/085/GCA_900164085.1_16780_8_31	-	VRECD0141
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.67523	57.2	-	CCFN01	259	5920	5504	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602909	GCA_000821425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/425/GCA_000821425.1_103BO	-	-
Vibrio parahaemolyticus	670	PRJNA327110	327110	Proteobacteria	Gammaproteobacteria	5.35365	45.1	-	MBPB01	1664	5517	4330	5/16/17	5/16/17	Contig	Health Canada	SAMN05301463	GCA_002144615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/615/GCA_002144615.1_ASM214461v1	-	HS-13-1_100
Campylobacter coli	195	PRJNA293499	293499	Proteobacteria	delta/epsilon subdivisions	1.74436	31.3	-	LISE01	35	1821	1720	2/2/16	3/19/17	Scaffold	China CDC	SAMN04004269	GCA_001545435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/435/GCA_001545435.1_ASM154543v1	-	SH-CCHF12C088
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.31987	64.1	-	FVHW01	27	5405	5230	3/10/17	3/18/17	Scaffold	SC	SAMEA2275657	GCA_900133665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/665/GCA_900133665.1_12163_1_13	-	935
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.02388	64.1	-	FVHT01	15	5052	4877	3/10/17	3/18/17	Scaffold	SC	SAMEA2275665	GCA_900133675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/675/GCA_900133675.1_12163_1_21	-	943
Campylobacter coli	195	PRJNA293500	293500	Proteobacteria	delta/epsilon subdivisions	1.75971	31.3	-	LISF01	35	1860	1760	2/2/16	3/19/17	Scaffold	China CDC	SAMN04004270	GCA_001545445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/445/GCA_001545445.1_ASM154544v1	-	SH-CCD12C100
Vibrio parahaemolyticus	670	PRJNA327110	327110	Proteobacteria	Gammaproteobacteria	5.35904	45.2	-	MBPD01	2085	5579	4245	5/16/17	5/16/17	Contig	Health Canada	SAMN05301510	GCA_002144655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/655/GCA_002144655.1_ASM214465v1	-	HS-06-05_100
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.78034	57.1	-	CCFO01	169	6025	5670	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602910	GCA_000821445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/445/GCA_000821445.1_104BO	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.29162	28.5	-	FULL01	37	4058	3869	2/14/17	2/23/17	Scaffold	SC	SAMEA3375094	GCA_900164105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/105/GCA_900164105.1_16780_8_28	-	VRECD0138
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.62968	50.8	-	FTSX01	402	5202	4440	1/28/17	3/2/17	Scaffold	SC	SAMEA2054388	GCA_900157635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/635/GCA_900157635.1_9789_6_62	-	2090STDY5461776
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.14161	41	-	CDUL01	85	2131	2000	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233830	GCA_000941255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/255/GCA_000941255.1_Velvet_assembly	-	E39A
Streptococcus agalactiae LDS 628	1154886	PRJNA86433	86433	Terrabacteria group	Firmicutes	2.21026	35.8	-	ALSH01	103	2308	2038	8/15/12	3/15/17	Scaffold	The J. Craig Venter Institute	SAMN00993453	GCA_000288055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/055/GCA_000288055.1_ASM28805v1	-	LDS 628
Acinetobacter baumannii 987421	1310559	PRJNA194635	194635	Proteobacteria	Gammaproteobacteria	4.17995	38.9	-	JMNL01	274	4254	3920	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692948	GCA_000681735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/735/GCA_000681735.1_ASM68173v1	-	987421
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.4874	66.3	-	CTCP01	78	6164	6013	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296421	GCA_001374415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/415/GCA_001374415.1_209_15_321Gb_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16278	51.5	-	FEYC01	80	2504	2144	2/9/16	3/21/17	Scaffold	SC	SAMEA2674441	GCA_900039595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/595/GCA_900039595.1_14355_8_3	-	2842STDY5881728
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05201	39.6	-	COER02	154	2216	2003	3/23/15	3/11/17	Contig	SC	SAMEA1463214	GCA_001116785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/785/GCA_001116785.2_7622_5_56	-	MD5068
Escherichia coli KTE68	1182675	PRJNA164893	164893	Proteobacteria	Gammaproteobacteria	5.64995	50.7	-	ASUW01	19	5830	5462	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00854627	GCA_000408385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/385/GCA_000408385.1_Esch_coli_KTE68_V1	-	KTE68
Mycobacterium tuberculosis M1415	1448676	PRJNA235687	235687	Terrabacteria group	Actinobacteria	4.42673	65.6	-	JKNQ01	7	4290	4107	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599022	GCA_000662865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/865/GCA_000662865.1_Myco_tube_M1415_V1	-	M1415
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.03608	37.8	-	MDOV01	285	3140	2931	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410840	GCA_001710805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/805/GCA_001710805.1_ASM171080v1	-	A147
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.62069	30.5	-	NFMH01	63	1723	1602	6/8/17	6/10/17	Contig	Swansea University	SAMN06888375	GCA_002177255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/255/GCA_002177255.1_ASM217725v1	28493321	RM10985
Salmonella enterica subsp. enterica serovar Newport str. #11-3	1127354	PRJNA78361	78361	Proteobacteria	Gammaproteobacteria	4.7706	52.1	-	AUQQ01	57	4875	4610	10/17/13	2/26/17	Contig	FDA	SAMN01816171	GCA_000474535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/535/GCA_000474535.1_CFSAN001192_01.0	-	#11-3
Staphylococcus aureus SMMC6085	1409581	PRJNA223901	223901	Terrabacteria group	Firmicutes	2.82986	32.8	-	JBKL01	32	2937	2802	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381642	GCA_000541095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/095/GCA_000541095.1_Stap_aure_SMMC6085_V1	-	SMMC6085
Staphylococcus aureus COAS6060	1409582	PRJNA223902	223902	Terrabacteria group	Firmicutes	2.87405	32.9	-	JBKK01	36	3018	2850	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381643	GCA_000541115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/115/GCA_000541115.1_Stap_aure_COAS6060_V1	-	COAS6060
Salmonella enterica subsp. enterica serovar Typhimurium str. 34502	1124971	PRJNA78371	78371	Proteobacteria	Gammaproteobacteria	5.18578	52	-	AUQT01	77	5395	5142	10/17/13	2/26/17	Contig	FDA	SAMN01814034	GCA_000474555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/555/GCA_000474555.1_CFSAN001198_01.0	-	34502
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.77806	30.2	-	NFML01	306	1891	1696	6/8/17	6/10/17	Contig	Swansea University	SAMN06888362	GCA_002177365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/365/GCA_002177365.1_ASM217736v1	28493321	isolate_W6
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.04837	37.8	-	MDOU01	25	3130	3043	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410821	GCA_001710815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/815/GCA_001710815.1_ASM171081v1	-	A19
Mycobacterium tuberculosis M1416	1448677	PRJNA235688	235688	Terrabacteria group	Actinobacteria	4.42764	65.5	-	JKNP01	4	4279	4099	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599023	GCA_000662885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/885/GCA_000662885.1_Myco_tube_M1416_V1	-	M1416
Escherichia coli KTE69	1182676	PRJNA164895	164895	Proteobacteria	Gammaproteobacteria	5.44733	50.5	-	ASUX01	17	5794	5267	5/31/13	2/22/17	Scaffold	Broad Institute	SAMN00854628	GCA_000408405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/405/GCA_000408405.1_Esch_coli_KTE69_V1	-	KTE69
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.12266	39.7	-	CKHE01	58	2286	2023	3/21/15	3/11/17	Contig	SC	SAMEA1023677	GCA_001116805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/805/GCA_001116805.1_6631_2_11	-	type strain: N
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12115	51.7	-	FFCS01	88	2464	2152	2/9/16	3/19/17	Scaffold	SC	SAMEA2674180	GCA_900039605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/605/GCA_900039605.1_14555_6_20	-	2842STDY5881457
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48634	66.3	-	CUWY01	84	6168	6007	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296422	GCA_001374435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/435/GCA_001374435.1_210_Rw11_contigs_500	-	-
Acinetobacter baumannii 45075_4	1311091	PRJNA195172	195172	Proteobacteria	Gammaproteobacteria	4.15827	39	-	JMND01	88	4139	3842	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646389	GCA_000681755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/755/GCA_000681755.1_ASM68175v1	-	45075_4
Streptococcus agalactiae str. Gottschalk 1003A	1154888	PRJNA86439	86439	Terrabacteria group	Firmicutes	2.15331	35.3	-	ALSI01	41	2205	2084	8/15/12	3/15/17	Scaffold	The J. Craig Venter Institute	SAMN00991154	GCA_000288075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/075/GCA_000288075.1_ASM28807v1	-	Gottschalk 1003A
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.07275	41.2	-	CDUY01	56	2070	1977	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233849	GCA_000941355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/355/GCA_000941355.1_Velvet_assembly	-	F36U
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.54152	50.8	-	FTSE01	392	5073	4324	1/28/17	2/26/17	Scaffold	SC	SAMEA2054392	GCA_900157655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/655/GCA_900157655.1_9789_6_66	-	2090STDY5461780
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.08029	28.8	-	FULM01	29	3829	3642	2/14/17	2/23/17	Scaffold	SC	SAMEA3375115	GCA_900164125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/125/GCA_900164125.1_16780_8_49	-	VRECD0161
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.52773	57.3	-	CCFP01	72	5504	5194	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602911	GCA_000821465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/465/GCA_000821465.1_10PV	-	-
Vibrio parahaemolyticus	670	PRJNA263814	263814	Proteobacteria	Gammaproteobacteria	4.2861	45	-	NIXT01	6005	8007	7867	7/18/17	7/18/17	Contig	University of New Hampshire	SAMN06917280	GCA_002221095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/095/GCA_002221095.1_ASM222109v1	28687650	MAVP-3
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.96424	31.1	-	MJVY01	40	2101	1974	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03359757	GCA_001761965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/965/GCA_001761965.1_ASM176196v1	-	BCW_5918
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.27399	63.8	-	FVHS01	46	5313	5160	3/10/17	4/10/17	Scaffold	SC	SAMEA2275659	GCA_900133685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/685/GCA_900133685.1_12163_1_15	-	937
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.36075	64.1	-	FVHZ01	23	5538	5342	3/10/17	3/18/17	Scaffold	SC	SAMEA2275662	GCA_900133695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/695/GCA_900133695.1_12163_1_18	-	940
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.98359	31.1	-	MJVZ01	46	2120	1989	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03358121	GCA_001761985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/985/GCA_001761985.1_ASM176198v1	-	BCW_4454
Vibrio parahaemolyticus	670	PRJNA396740	396740	Proteobacteria	Gammaproteobacteria	4.34579	45.2	-	NPOL01	152	4314	4149	8/14/17	8/14/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07451861	GCA_002251505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/505/GCA_002251505.1_ASM225150v1	-	CDC-AM43539
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.55656	57.1	-	CCFQ01	105	5721	5427	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602912	GCA_000821485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/485/GCA_000821485.1_11PV	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.31658	28.5	-	FULR01	34	4084	3888	2/14/17	2/23/17	Scaffold	SC	SAMEA3375113	GCA_900164135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/135/GCA_900164135.1_16780_8_47	-	VRECD0159
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.61692	50.8	-	FTSV01	479	5209	4449	1/28/17	2/26/17	Scaffold	SC	SAMEA2054241	GCA_900157665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/665/GCA_900157665.1_9789_6_55	-	2090STDY5461769
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.06414	41.1	-	CDYW01	54	2053	1952	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234074	GCA_000941415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/415/GCA_000941415.1_Velvet_assembly	-	S8Z
Streptococcus agalactiae GB00955	1154960	PRJNA86593	86593	Terrabacteria group	Firmicutes	2.07081	35.2	-	ALUW01	36	2132	2018	8/15/12	3/15/17	Scaffold	The J. Craig Venter Institute	SAMN00991433	GCA_000288595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/595/GCA_000288595.1_ASM28859v1	-	GB00955
Acinetobacter baumannii 45075_8	1311095	PRJNA195176	195176	Proteobacteria	Gammaproteobacteria	3.9308	39.1	-	JMNE01	59	3782	3540	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646392	GCA_000681775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/775/GCA_000681775.1_ASM68177v1	-	45075_8
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48673	66.3	-	CUWX01	77	6169	6010	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296423	GCA_001374455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/455/GCA_001374455.1_211_Rw131_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.14261	51.6	-	FERA01	88	2484	2135	2/9/16	3/21/17	Scaffold	SC	SAMEA2673861	GCA_900041295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/295/GCA_900041295.1_14355_4_30	-	2842STDY5880987
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09971	39.6	-	CKYG01	69	2304	2084	3/21/15	3/11/17	Contig	SC	SAMEA1025964	GCA_001116945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/945/GCA_001116945.1_6823_7_8	-	SMRU2000
Escherichia coli KTE70	1182677	PRJNA164897	164897	Proteobacteria	Gammaproteobacteria	5.48838	50.5	-	ASUY01	23	5845	5307	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00854629	GCA_000408425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/425/GCA_000408425.1_Esch_coli_KTE70_V1	-	KTE70
Mycobacterium tuberculosis M1417	1448678	PRJNA235689	235689	Terrabacteria group	Actinobacteria	4.42257	65.6	-	JKNO01	5	4279	4095	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599024	GCA_000662905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/905/GCA_000662905.1_Myco_tube_M1417_V1	-	M1417
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.9191	37.9	-	MDPT01	18	2964	2873	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410725	GCA_001710845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/845/GCA_001710845.1_ASM171084v1	-	Lm230
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.57827	29.6	-	NFMM01	110	1622	1525	6/8/17	6/10/17	Contig	Swansea University	SAMN06888361	GCA_002177375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/375/GCA_002177375.1_ASM217737v1	28493321	isolate_W5
Salmonella enterica subsp. enterica serovar Typhimurium str. 36618	1124973	PRJNA78375	78375	Proteobacteria	Gammaproteobacteria	5.01629	52.2	-	AUQV01	55	5174	4935	10/17/13	2/26/17	Contig	FDA	SAMN01816175	GCA_000474575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/575/GCA_000474575.1_CFSAN001200_01.0	-	36618
Staphylococcus aureus COAS6059	1409583	PRJNA223903	223903	Terrabacteria group	Firmicutes	2.8969	32.7	-	JBKJ01	9	3054	2896	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381644	GCA_000541135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/135/GCA_000541135.1_Stap_aure_COAS6059_V1	-	COAS6059
Staphylococcus aureus WMCS6055	1409584	PRJNA223904	223904	Terrabacteria group	Firmicutes	2.89273	32.7	-	JBKI01	9	3050	2886	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381645	GCA_000541155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/155/GCA_000541155.1_Stap_aure_WMCS6055_V1	-	WMCS6055
Salmonella enterica subsp. enterica serovar Newport str. WA_14885	997340	PRJNA63697	63697	Proteobacteria	Gammaproteobacteria	4.67837	52.2	-	AYED01	89	4760	4376	10/25/13	2/26/17	Contig	FDA	SAMN02415192	GCA_000483675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/675/GCA_000483675.1_ASM48367v1	-	WA_14885
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.80534	30.2	-	NFMN01	85	1925	1753	6/8/17	6/10/17	Contig	Swansea University	SAMN06888360	GCA_002177385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/385/GCA_002177385.1_ASM217738v1	28493321	isolate_W46
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.94498	37.9	-	MDPY01	29	3019	2926	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410715	GCA_001710855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/855/GCA_001710855.1_ASM171085v1	-	Lm224
Mycobacterium tuberculosis M1418	1448679	PRJNA235690	235690	Terrabacteria group	Actinobacteria	4.42386	65.5	-	JKNN01	6	4283	4101	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599025	GCA_000662925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/925/GCA_000662925.1_Myco_tube_M1418_V1	-	M1418
Escherichia coli KTE71	1182678	PRJNA164899	164899	Proteobacteria	Gammaproteobacteria	5.23833	50.6	-	ASUZ01	14	5458	4996	5/31/13	2/22/17	Scaffold	Broad Institute	SAMN00854630	GCA_000408445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/445/GCA_000408445.1_Esch_coli_KTE71_V1	-	KTE71
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07388	39.6	-	CKCH01	51	2279	2061	3/21/15	3/11/17	Contig	SC	SAMEA1024203	GCA_001116965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/965/GCA_001116965.1_6593_4_2	-	4
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16049	51.6	-	FEUR01	68	2487	2157	2/9/16	3/19/17	Scaffold	SC	SAMEA2673934	GCA_900041305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/305/GCA_900041305.1_14355_6_64	-	2842STDY5881213
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48755	66.3	-	CUXA01	80	6169	6013	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296424	GCA_001374475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/475/GCA_001374475.1_214_Tsb_9_contigs_500	-	-
Acinetobacter baumannii 45075_9	1311096	PRJNA195177	195177	Proteobacteria	Gammaproteobacteria	3.96047	39.1	-	JMNF01	69	3824	3569	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646393	GCA_000681795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/795/GCA_000681795.1_ASM68179v1	-	45075_9
Streptococcus agalactiae CCUG 37737	1154811	PRJNA86227	86227	Terrabacteria group	Firmicutes	2.19397	35.3	-	ALQO01	43	2270	2148	8/15/12	3/15/17	Scaffold	The J. Craig Venter Institute	SAMN00991057	GCA_000288755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/755/GCA_000288755.1_ASM28875v1	-	CCUG 37737
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05892	41.1	-	CDVP01	62	2058	1944	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233784	GCA_000941475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/475/GCA_000941475.1_Velvet_assembly	-	B36G
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.6052	50.4	-	FTSU01	436	5145	4343	1/28/17	2/26/17	Scaffold	SC	SAMEA2054165	GCA_900157675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/675/GCA_900157675.1_9789_6_31	-	2090STDY5461745
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.27721	28.7	-	FULH01	55	4120	3944	2/14/17	2/23/17	Scaffold	SC	SAMEA3375085	GCA_900164145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/145/GCA_900164145.1_16780_8_19	-	VRECD0129
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.55325	57.1	-	CCFR01	181	5759	5409	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602913	GCA_000821505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/505/GCA_000821505.1_12PV	-	-
Vibrio parahaemolyticus	670	PRJNA396740	396740	Proteobacteria	Gammaproteobacteria	4.30103	45.1	-	NPOM01	117	4134	3938	8/14/17	8/14/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07451860	GCA_002251555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/555/GCA_002251555.1_ASM225155v1	-	CDC-AM50933
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.98376	31.1	-	MJWA01	48	2118	1996	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03360159	GCA_001761995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/995/GCA_001761995.1_ASM176199v1	-	BCW_6450
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.25617	64.1	-	FSDQ01	25	5294	5138	12/14/16	3/21/17	Scaffold	SC	SAMEA2275664	GCA_900133705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/705/GCA_900133705.1_12163_1_20	-	942
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98154	64.2	-	FVHR01	18	4995	4854	3/10/17	3/18/17	Scaffold	SC	SAMEA2275663	GCA_900133715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/715/GCA_900133715.1_12163_1_19	-	941
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.74617	31.4	-	MJWB01	34	1819	1715	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03358120	GCA_001762015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/015/GCA_001762015.1_ASM176201v1	-	BCW_4453
Vibrio parahaemolyticus TUMSAT_DE2_S2	1441608	PRJDB1577	241082	Proteobacteria	Gammaproteobacteria	5.62353	45.2	-	BAVG01	96	-	-	3/12/14	9/15/15	Scaffold	Tokyo University of Marine Science and Technology	SAMD00009558	GCA_000591475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/591/475/GCA_000591475.1_ASM59147v1	24723705	TUMSAT_DE2_S2
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.55407	57.1	-	CCFT01	84	5707	5435	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602914	GCA_000821525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/525/GCA_000821525.1_13PV	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.24505	29.2	-	FULI01	59	3966	3784	2/14/17	2/23/17	Scaffold	SC	SAMEA3375073	GCA_900164155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/155/GCA_900164155.1_16780_8_7	-	VRECD0121
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.77909	50.5	-	FTTG01	603	5465	4570	1/28/17	2/26/17	Scaffold	SC	SAMEA2054398	GCA_900157685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/685/GCA_900157685.1_9789_6_72	-	2090STDY5461786
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04743	41.2	-	CDXJ01	51	2041	1949	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234044	GCA_000941595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/595/GCA_000941595.1_Velvet_assembly	-	S2V
Streptococcus agalactiae BSU450	1154825	PRJNA86295	86295	Terrabacteria group	Firmicutes	2.01738	35.2	-	ALRC01	40	2073	1944	8/15/12	3/15/17	Scaffold	The J. Craig Venter Institute	SAMN00991121	GCA_000289035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/035/GCA_000289035.1_ASM28903v1	-	BSU450
Acinetobacter baumannii 1539026	1310809	PRJNA194885	194885	Proteobacteria	Gammaproteobacteria	4.14589	39.1	-	JMNH01	136	4135	3874	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02649415	GCA_000681835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/835/GCA_000681835.1_ASM68183v1	-	1539026
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48678	66.3	-	CUXB01	78	6168	6010	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296425	GCA_001374495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/495/GCA_001374495.1_215_2_5Pc_8_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11338	51.8	-	FEUT01	89	2423	2084	2/9/16	3/19/17	Scaffold	SC	SAMEA2673950	GCA_900041315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/315/GCA_900041315.1_14355_6_71	-	2842STDY5881220
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.04079	39.7	-	CRKK01	65	2235	2026	3/22/15	3/11/17	Contig	SC	SAMEA1025127	GCA_001116985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/985/GCA_001116985.1_6753_3_6	-	SMRU1518
Escherichia coli KTE73	1182680	PRJNA164903	164903	Proteobacteria	Gammaproteobacteria	5.18972	50.9	-	ASVA01	13	5457	4995	5/31/13	2/22/17	Scaffold	Broad Institute	SAMN00854632	GCA_000408465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/465/GCA_000408465.1_Esch_coli_KTE73_V1	-	KTE73
Mycobacterium tuberculosis M1422	1448680	PRJNA235691	235691	Terrabacteria group	Actinobacteria	4.42451	65.5	-	JKNM01	7	4282	4093	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599026	GCA_000662945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/945/GCA_000662945.1_Myco_tube_M1422_V1	-	M1422
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.91957	37.9	-	MDPP01	18	2974	2897	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410570	GCA_001710885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/885/GCA_001710885.1_ASM171088v1	-	Lm11
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.64937	30.5	-	NFMO01	66	1722	1614	6/8/17	6/10/17	Contig	Swansea University	SAMN06888359	GCA_002177435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/435/GCA_002177435.1_ASM217743v1	28493321	isolate_W45
Salmonella enterica subsp. enterica serovar Newport str. RI_10P069	997343	PRJNA63703	63703	Proteobacteria	Gammaproteobacteria	4.68192	52.2	-	AYEA01	46	4756	4365	10/25/13	3/5/17	Contig	FDA	SAMN02415189	GCA_000483775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/775/GCA_000483775.1_ASM48377v1	-	RI_10P069
Staphylococcus aureus HOAG6104	1409585	PRJNA223905	223905	Terrabacteria group	Firmicutes	2.89195	32.8	-	JBKH01	23	3043	2847	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381646	GCA_000541175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/175/GCA_000541175.1_Stap_aure_HOAG6104_V1	-	HOAG6104
Staphylococcus aureus GGMC6049	1409588	PRJNA223908	223908	Terrabacteria group	Firmicutes	2.94923	32.8	-	JBKE01	14	3133	2967	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381649	GCA_000541195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/195/GCA_000541195.1_Stap_aure_GGMC6049_V1	-	GGMC6049
Salmonella enterica subsp. enterica serovar Agona str. SA-2	1003186	PRJNA65259	65259	Proteobacteria	Gammaproteobacteria	4.76715	52.1	-	AYDW01	62	4852	4457	10/25/13	2/26/17	Contig	FDA	SAMN02415185	GCA_000483815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/815/GCA_000483815.1_ASM48381v1	-	SA-2
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.77313	30.3	-	NFMP01	94	1910	1802	6/8/17	6/10/17	Contig	Swansea University	SAMN06888358	GCA_002177455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/455/GCA_002177455.1_ASM217745v1	28493321	isolate_W44
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.97233	37.9	-	MDPK01	28	3008	2919	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410586	GCA_001710905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/905/GCA_001710905.1_ASM171090v1	-	Lm60
Mycobacterium tuberculosis M1424	1448681	PRJNA235692	235692	Terrabacteria group	Actinobacteria	4.42017	65.6	-	JKNL01	10	4285	4098	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599027	GCA_000662965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/965/GCA_000662965.1_Myco_tube_M1424_V1	-	M1424
Escherichia coli KTE74	1182681	PRJNA164905	164905	Proteobacteria	Gammaproteobacteria	5.21804	50.5	-	ASVB01	14	5447	4955	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00854633	GCA_000408485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/485/GCA_000408485.1_Esch_coli_KTE74_V1	-	KTE74
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.09454	39.7	-	CMWJ01	91	2218	1973	3/23/15	3/11/17	Contig	SC	SAMEA1022780	GCA_001117005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/005/GCA_001117005.1_5919_1_11	-	139
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.156	51.6	-	FEVY01	73	2508	2142	2/9/16	3/21/17	Scaffold	SC	SAMEA2674101	GCA_900041325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/325/GCA_900041325.1_14324_4_49	-	2842STDY5881294
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48936	66.3	-	CTCR01	79	6165	6009	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296426	GCA_001374515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/515/GCA_001374515.1_216_10Pc_7_contigs_500	-	-
Acinetobacter baumannii 18689	1310573	PRJNA194649	194649	Proteobacteria	Gammaproteobacteria	4.26967	38.8	-	JMNI01	317	4294	3932	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692944	GCA_000681855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/855/GCA_000681855.1_ASM68185v1	-	18689
Streptococcus agalactiae BSU167	1154834	PRJNA86327	86327	Terrabacteria group	Firmicutes	2.24428	35.3	-	ALRL01	88	2356	2168	8/15/12	3/15/17	Scaffold	The J. Craig Venter Institute	SAMN00993458	GCA_000289095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/095/GCA_000289095.1_ASM28909v1	-	BSU167
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03779	41.2	-	CDVS01	54	2021	1922	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233789	GCA_000941675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/675/GCA_000941675.1_Velvet_assembly	-	B39D
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.63768	50.8	-	FTSG01	456	5123	4463	1/28/17	2/26/17	Scaffold	SC	SAMEA2054464	GCA_900157695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/695/GCA_900157695.1_9789_6_84	-	2090STDY5461798
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.23122	28.7	-	FULV01	37	3993	3787	2/14/17	2/23/17	Scaffold	SC	SAMEA3375117	GCA_900164165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/165/GCA_900164165.1_16780_8_51	-	VRECD0163
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.32419	57.4	-	CCFS01	80	5395	5070	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602915	GCA_000821545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/545/GCA_000821545.1_14PV	-	-
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.83444	31.2	-	MJWC01	37	1932	1820	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03358124	GCA_001762045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/045/GCA_001762045.1_ASM176204v1	-	BCW_4457
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.49479	64	-	FVHQ01	39	5703	5441	3/10/17	3/18/17	Scaffold	SC	SAMEA2275661	GCA_900133725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/725/GCA_900133725.1_12163_1_17	-	939
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.07296	64.2	-	FVIC01	7	5167	4979	3/10/17	3/18/17	Scaffold	SC	SAMEA2275667	GCA_900133735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/735/GCA_900133735.1_12163_1_23	-	945
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.82862	31.2	-	MJWD01	32	1932	1818	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03359755	GCA_001762065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/065/GCA_001762065.1_ASM176206v1	-	BCW_5916
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.47358	57.2	-	CCFV01	120	5501	5196	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602916	GCA_000821565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/565/GCA_000821565.1_15PV	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.17831	28.6	-	FUMA01	29	3931	3733	2/14/17	2/23/17	Scaffold	SC	SAMEA3375114	GCA_900164185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/185/GCA_900164185.1_16780_8_48	-	VRECD0160
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.67594	50.8	-	FTSI01	401	5257	4497	1/28/17	2/26/17	Scaffold	SC	SAMEA2054396	GCA_900157705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/705/GCA_900157705.1_9789_6_70	-	2090STDY5461784
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.09434	41.1	-	CDTF01	56	2081	1986	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233785	GCA_000941695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/695/GCA_000941695.1_Velvet_assembly	-	B36K
Streptococcus agalactiae STIR-CD-24	1154852	PRJNA86363	86363	Terrabacteria group	Firmicutes	2.01283	35.3	-	ALRR01	43	2060	1945	8/15/12	3/15/17	Scaffold	The J. Craig Venter Institute	SAMN00993775	GCA_000289215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/215/GCA_000289215.1_ASM28921v1	-	STIR-CD-24
Acinetobacter baumannii 916567	1310568	PRJNA194644	194644	Proteobacteria	Gammaproteobacteria	4.35441	38.9	-	JMNJ01	413	4501	4086	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692945	GCA_000681875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/875/GCA_000681875.1_ASM68187v1	-	916567
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.49067	66.3	-	CTCS01	77	6175	6012	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296427	GCA_001374535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/535/GCA_001374535.1_217_12_5Pc_4_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.17662	51.3	-	FEYS01	113	2503	2147	2/9/16	3/21/17	Scaffold	SC	SAMEA2674121	GCA_900041335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/335/GCA_900041335.1_14555_5_9	-	2842STDY5881350
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06051	39.6	-	CNTK02	166	2209	2009	3/22/15	3/11/17	Contig	SC	SAMEA1032724	GCA_001117165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/165/GCA_001117165.2_6999_4_23	-	146066
Escherichia coli KTE89	1182693	PRJNA164929	164929	Proteobacteria	Gammaproteobacteria	5.09338	50.6	-	ASVC01	11	5184	4858	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00854645	GCA_000408505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/505/GCA_000408505.1_Esch_coli_KTE89_V1	-	KTE89
Mycobacterium tuberculosis M1425	1448682	PRJNA235693	235693	Terrabacteria group	Actinobacteria	4.417	65.5	-	JKNK01	3	4284	4091	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599028	GCA_000662985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/662/985/GCA_000662985.1_Myco_tube_M1425_V1	-	M1425
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.97042	37.9	-	MDPO01	28	3026	2944	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410578	GCA_001710925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/925/GCA_001710925.1_ASM171092v1	-	Lm32
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.46011	30.9	-	NFMQ01	314	1580	1391	6/8/17	6/10/17	Contig	Swansea University	SAMN06888357	GCA_002177465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/465/GCA_002177465.1_ASM217746v1	28493321	isolate_W43
Salmonella enterica subsp. enterica serovar Muenster str. 660	1124963	PRJNA78405	78405	Proteobacteria	Gammaproteobacteria	4.76518	52.1	-	AYCZ01	161	4882	4540	10/25/13	2/26/17	Contig	FDA	SAMN02415162	GCA_000483855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/855/GCA_000483855.1_ASM48385v1	-	660
Staphylococcus aureus OCMM6067	1409589	PRJNA223909	223909	Terrabacteria group	Firmicutes	2.78582	32.7	-	JBKD01	50	2891	2707	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381650	GCA_000541215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/215/GCA_000541215.1_Stap_aure_OCMM6067_V1	-	OCMM6067
Staphylococcus aureus OCMM6066	1409590	PRJNA223910	223910	Terrabacteria group	Firmicutes	2.78338	32.7	-	JBKC01	47	2897	2700	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381651	GCA_000541235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/235/GCA_000541235.1_Stap_aure_OCMM6066_V1	-	OCMM6066
Salmonella enterica subsp. enterica serovar Agona str. 442692 2-4	1124912	PRJNA78423	78423	Proteobacteria	Gammaproteobacteria	4.74512	52.1	-	AYCS01	56	4808	4561	10/25/13	2/26/17	Contig	FDA	SAMN02415155	GCA_000483895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/895/GCA_000483895.1_ASM48389v1	-	442692 2-4
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.60004	30.6	-	NFMR01	64	1663	1568	6/8/17	6/10/17	Contig	Swansea University	SAMN06888356	GCA_002177475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/475/GCA_002177475.1_ASM217747v1	28493321	isolate_W42
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.00837	37.8	-	MDOD01	21	3095	3009	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410815	GCA_001710935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/935/GCA_001710935.1_ASM171093v1	-	A504
Mycobacterium tuberculosis M1429	1448683	PRJNA235694	235694	Terrabacteria group	Actinobacteria	4.42695	65.6	-	JKNJ01	76	4325	4113	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599029	GCA_000663005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/005/GCA_000663005.1_Myco_tube_M1429_V1	-	M1429
Escherichia coli KTE98	1182698	PRJNA164939	164939	Proteobacteria	Gammaproteobacteria	5.20993	50.5	-	ASVE01	5	5271	4926	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00854650	GCA_000408545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/545/GCA_000408545.1_Esch_coli_KTE98_V1	-	KTE98
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.0766	39.6	-	CKQT01	56	2283	2040	3/21/15	3/11/17	Contig	SC	SAMEA1024761	GCA_001117245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/245/GCA_001117245.1_6680_6_6	-	SMRU942
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16982	51.5	-	FEZF01	75	2515	2158	2/9/16	3/21/17	Scaffold	SC	SAMEA2674168	GCA_900041345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/345/GCA_900041345.1_14555_5_23	-	2842STDY5881364
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48757	66.3	-	CUXD01	76	6169	6010	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296428	GCA_001374555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/555/GCA_001374555.1_218_15Pc_3_contigs_500	-	-
Acinetobacter baumannii 96512	1310602	PRJNA194678	194678	Proteobacteria	Gammaproteobacteria	4.28807	39.1	-	JMNK01	342	4353	3934	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692947	GCA_000681895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/895/GCA_000681895.1_ASM68189v1	-	96512
Streptococcus agalactiae MRI Z1-213	1154876	PRJNA86411	86411	Terrabacteria group	Firmicutes	2.34641	35.7	-	ALSD01	86	2484	2230	8/15/12	3/15/17	Scaffold	The J. Craig Venter Institute	SAMN00993332	GCA_000289375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/375/GCA_000289375.1_ASM28937v1	-	MRI Z1-213
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.08429	41.2	-	CDYO01	60	2089	1995	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234072	GCA_000941735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/735/GCA_000941735.1_Velvet_assembly	-	S8X
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.59737	50.7	-	FTSR01	403	5038	4407	1/28/17	2/26/17	Scaffold	SC	SAMEA2054235	GCA_900157715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/715/GCA_900157715.1_9789_6_49	-	2090STDY5461763
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.28251	28.8	-	FULW01	28	4046	3856	2/14/17	2/23/17	Scaffold	SC	SAMEA3375129	GCA_900164195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/195/GCA_900164195.1_16780_8_63	-	VRECD0177
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.45115	57.2	-	CCFU01	91	5543	5265	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602917	GCA_000821585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/585/GCA_000821585.1_16BO	-	-
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.8728	31.2	-	MJWE01	43	1979	1856	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03358122	GCA_001762085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/085/GCA_001762085.1_ASM176208v1	-	BCW_4455
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.48865	64	-	FVHX01	67	5681	5424	3/10/17	3/18/17	Scaffold	SC	SAMEA2275660	GCA_900133745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/745/GCA_900133745.1_12163_1_16	-	938
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.36019	64.1	-	FVIG01	18	5528	5344	3/10/17	3/18/17	Scaffold	SC	SAMEA2275670	GCA_900133755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/755/GCA_900133755.1_12163_1_26	-	948
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.82347	31.2	-	MJWF01	37	1925	1796	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03359756	GCA_001762095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/095/GCA_001762095.1_ASM176209v1	-	BCW_5917
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.49208	57.3	-	CCFW01	127	5544	5208	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602918	GCA_000821605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/605/GCA_000821605.1_17PV	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	3.94559	28.4	-	FULT01	38	3659	3470	2/14/17	2/23/17	Scaffold	SC	SAMEA3375074	GCA_900164205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/205/GCA_900164205.1_16780_8_8	-	VRECD0123
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.60774	50.8	-	FTSM01	426	5147	4419	1/28/17	2/26/17	Scaffold	SC	SAMEA2054387	GCA_900157725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/725/GCA_900157725.1_9789_6_61	-	2090STDY5461775
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.09994	41	-	CDUR01	58	2080	1985	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233839	GCA_000941755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/755/GCA_000941755.1_Velvet_assembly	-	F14M
Streptococcus agalactiae str. Gottschalk 992B	1154890	PRJNA86449	86449	Terrabacteria group	Firmicutes	2.03261	35.3	-	ALSK01	24	2095	1926	8/15/12	3/15/17	Scaffold	The J. Craig Venter Institute	SAMN00991141	GCA_000289455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/455/GCA_000289455.1_ASM28945v1	-	Gottschalk 992B
Acinetobacter baumannii 25691_8	1310932	PRJNA195009	195009	Proteobacteria	Gammaproteobacteria	4.35275	38.9	-	JMOW01	505	4369	3963	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692987	GCA_000681915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/915/GCA_000681915.1_ASM68191v1	-	25691_8
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48946	66.3	-	CUXC01	77	6167	6011	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296429	GCA_001374575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/575/GCA_001374575.1_219_15_121A_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12747	51.7	-	FEZM01	76	2485	2152	2/9/16	3/19/17	Scaffold	SC	SAMEA2674191	GCA_900041355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/355/GCA_900041355.1_14555_5_30	-	2842STDY5881371
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.17199	39.5	-	CMOS01	82	2444	2171	3/22/15	3/4/17	Contig	SC	SAMEA2061500	GCA_001117345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/345/GCA_001117345.1_9803_7_45	-	14
Escherichia coli KTE100	1182699	PRJNA164941	164941	Proteobacteria	Gammaproteobacteria	5.29084	50.8	-	ASVF01	5	5464	5040	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00854651	GCA_000408565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/565/GCA_000408565.1_Esch_coli_KTE100_V1	-	KTE100
Mycobacterium tuberculosis M1431	1448684	PRJNA235695	235695	Terrabacteria group	Actinobacteria	4.42859	65.5	-	JKNI01	6	4291	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599030	GCA_000663025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/025/GCA_000663025.1_Myco_tube_M1431_V1	-	M1431
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.95429	37.9	-	MDOT01	23	3012	2922	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410751	GCA_001710965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/965/GCA_001710965.1_ASM171096v1	-	A22
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.64909	30.5	-	NFMS01	55	1719	1620	6/8/17	6/10/17	Contig	Swansea University	SAMN06888355	GCA_002177515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/515/GCA_002177515.1_ASM217751v1	28493321	isolate_W41
Salmonella enterica subsp. enterica serovar Senftenberg str. 423984-1	749960	PRJNA46893	46893	Proteobacteria	Gammaproteobacteria	4.69171	52.1	-	AYDP01	350	4875	4329	10/25/13	3/5/17	Contig	FDA	SAMN02415178	GCA_000483915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/915/GCA_000483915.1_ASM48391v1	-	423984-1
Staphylococcus aureus MISS6052	1409591	PRJNA223911	223911	Terrabacteria group	Firmicutes	2.88628	32.8	-	JBKB01	29	3024	2836	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381652	GCA_000541255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/255/GCA_000541255.1_Stap_aure_MISS6052_V1	-	MISS6052
Staphylococcus aureus UCIM6065	1409592	PRJNA223912	223912	Terrabacteria group	Firmicutes	2.85704	32.8	-	JBKA01	13	3008	2841	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381653	GCA_000541275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/275/GCA_000541275.1_Stap_aure_UCIM6065_V1	-	UCIM6065
Salmonella enterica subsp. enterica serovar Agona str. ATCC BAA-707	935703	PRJNA61147	61147	Proteobacteria	Gammaproteobacteria	4.82983	52.1	-	AYDN01	84	4905	4657	10/25/13	2/26/17	Contig	FDA	SAMN02415176	GCA_000483935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/935/GCA_000483935.1_CFSAN000506_01.0	-	ATCC BAA-707
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.80371	30.2	-	NFMT01	90	1884	1769	6/8/17	6/10/17	Contig	Swansea University	SAMN06888354	GCA_002177535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/535/GCA_002177535.1_ASM217753v1	28493321	isolate_W40
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.97715	37.8	-	MDNY01	20	3039	2943	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410772	GCA_001710985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/985/GCA_001710985.1_ASM171098v1	-	A512
Mycobacterium tuberculosis M1438	1448685	PRJNA235696	235696	Terrabacteria group	Actinobacteria	4.42572	65.6	-	JKNH01	6	4291	4111	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599031	GCA_000663045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/045/GCA_000663045.1_Myco_tube_M1438_V1	-	M1438
Escherichia coli KTE102	1182701	PRJNA164945	164945	Proteobacteria	Gammaproteobacteria	4.95488	50.9	-	ASVG01	8	5277	4620	5/31/13	2/22/17	Scaffold	Broad Institute	SAMN00854653	GCA_000408585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/585/GCA_000408585.1_Esch_coli_KTE102_V1	-	KTE102
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00083	39.7	-	CNYG02	171	2141	1956	3/22/15	3/11/17	Contig	SC	SAMEA1463032	GCA_001117385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/385/GCA_001117385.2_7553_4_20	-	ND6141
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.13108	51.7	-	FFAP01	74	2504	2170	2/9/16	3/19/17	Scaffold	SC	SAMEA2674258	GCA_900041365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/365/GCA_900041365.1_14555_5_59	-	2842STDY5881400
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48811	66.3	-	CTCT01	80	6166	6008	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296430	GCA_001374595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/595/GCA_001374595.1_220_15_221Ga_contigs_500	-	-
Acinetobacter baumannii 25750_1	1310965	PRJNA195042	195042	Proteobacteria	Gammaproteobacteria	4.06912	38.8	-	JMOX01	227	4073	3769	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692988	GCA_000681935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/935/GCA_000681935.1_ASM68193v1	-	25750_1
Streptococcus agalactiae SS1014	1266070	PRJEB1146	191877	Terrabacteria group	Firmicutes	1.98699	35.1	-	CAQC01	99	2042	1953	3/10/13	3/15/17	Scaffold	IP	SAMEA2272798	GCA_000347415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/415/GCA_000347415.1_ASM34741v1	23586779	SS1014
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.07877	41.2	-	CDYD01	55	2079	1984	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234059	GCA_000941775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/775/GCA_000941775.1_Velvet_assembly	-	S4K
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.5832	50.8	-	FTTA01	428	5113	4399	1/28/17	3/2/17	Scaffold	SC	SAMEA2054395	GCA_900157735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/735/GCA_900157735.1_9789_6_69	-	2090STDY5461783
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.28283	28.4	-	FUMD01	40	4032	3866	2/14/17	2/23/17	Scaffold	SC	SAMEA3375096	GCA_900164215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/215/GCA_900164215.1_16780_8_30	-	VRECD0140
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.52433	57.1	-	CCFX01	112	5576	5248	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602919	GCA_000821625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/625/GCA_000821625.1_18PV	-	-
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.86185	31.2	-	MJWL01	32	1948	1792	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03360156	GCA_001762225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/225/GCA_001762225.1_BCW_6447	-	BCW_6447
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.91533	64.2	-	FVIE01	11	4957	4825	3/10/17	3/18/17	Scaffold	SC	SAMEA2275669	GCA_900133765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/765/GCA_900133765.1_12163_1_25	-	947
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.89114	64.2	-	FSDR01	10	4880	4746	12/14/16	3/21/17	Scaffold	SC	SAMEA2275666	GCA_900133775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/775/GCA_900133775.1_12163_1_22	-	944
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.85706	31.2	-	MJWM01	31	1949	1793	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03360157	GCA_001762245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/245/GCA_001762245.1_BCW_6448	-	BCW_6448
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.72948	57.1	-	CCGA01	269	5875	5468	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602920	GCA_000821645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/645/GCA_000821645.1_19PV	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.32148	28.2	-	FUMC01	29	4102	3921	2/14/17	2/23/17	Scaffold	SC	SAMEA3375081	GCA_900164225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/225/GCA_900164225.1_16780_8_15	-	VRECD0125
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.57611	50.6	-	FTSD01	401	5100	4307	1/28/17	2/26/17	Scaffold	SC	SAMEA2054164	GCA_900157745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/745/GCA_900157745.1_9789_6_30	-	2090STDY5461744
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.12928	41.1	-	CDYC01	188	2092	1944	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234071	GCA_000941795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/795/GCA_000941795.1_Velvet_assembly	-	S8W
Streptococcus agalactiae CF01173	1266069	PRJEB1145	191872	Terrabacteria group	Firmicutes	2.02461	35.3	-	CAQB01	131	2058	1973	3/10/13	3/15/17	Scaffold	IP	SAMEA2272311	GCA_000347435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/435/GCA_000347435.1_ASM34743v1	23586779	CF01173
Acinetobacter baumannii 26016_2	1311069	PRJNA195150	195150	Proteobacteria	Gammaproteobacteria	4.32684	38.9	-	JMOY01	429	4412	4007	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692989	GCA_000681955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/955/GCA_000681955.1_ASM68195v1	-	26016_2
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48984	66.3	-	CUXE01	76	6173	6015	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296431	GCA_001374615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/615/GCA_001374615.1_221_15_321Ba_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15279	51.6	-	FFBN01	90	2507	2160	2/9/16	3/19/17	Scaffold	SC	SAMEA2674306	GCA_900041375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/375/GCA_900041375.1_14555_5_83	-	2842STDY5881424
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09376	39.6	-	CNZG02	171	2281	2062	3/23/15	3/11/17	Contig	SC	SAMEA1463289	GCA_001117405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/405/GCA_001117405.2_7553_5_64	-	PT8004
Escherichia coli KTE103	1182702	PRJNA164947	164947	Proteobacteria	Gammaproteobacteria	5.23119	50.8	-	ASVH01	24	5605	5109	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00854654	GCA_000408605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/605/GCA_000408605.1_Esch_coli_KTE103_V1	-	KTE103
Mycobacterium tuberculosis M1439	1448686	PRJNA235697	235697	Terrabacteria group	Actinobacteria	4.43057	65.5	-	JKNG01	7	4283	4097	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599032	GCA_000663065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/065/GCA_000663065.1_Myco_tube_M1439_V1	-	M1439
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.96086	37.8	-	MDOA01	19	3007	2924	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410771	GCA_001710995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/710/995/GCA_001710995.1_ASM171099v1	-	A508
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.59349	30.4	-	NFMV01	51	1658	1571	6/8/17	6/10/17	Contig	Swansea University	SAMN06888352	GCA_002177545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/545/GCA_002177545.1_ASM217754v1	28493321	isolate_W38
Salmonella enterica subsp. enterica serovar Newport str. RI_10P068	997342	PRJNA63701	63701	Proteobacteria	Gammaproteobacteria	4.6824	52.2	-	AYEB01	69	4762	4448	10/25/13	2/26/17	Contig	FDA	SAMN02415190	GCA_000483955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/955/GCA_000483955.1_ASM48395v1	-	RI_10P068
Staphylococcus aureus UCIM6066	1409593	PRJNA223913	223913	Terrabacteria group	Firmicutes	2.91248	32.9	-	JBJZ01	17	3057	2883	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381654	GCA_000541295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/295/GCA_000541295.1_Stap_aure_UCIM6066_V1	-	UCIM6066
Staphylococcus aureus UCIM6069	1409594	PRJNA223914	223914	Terrabacteria group	Firmicutes	2.89862	33	-	JBJY01	31	3058	2881	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381655	GCA_000541315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/315/GCA_000541315.1_Stap_aure_UCIM6069_V1	-	UCIM6069
Salmonella enterica subsp. enterica serovar Saintpaul str. 9712	1124964	PRJNA78349	78349	Proteobacteria	Gammaproteobacteria	4.68745	52.2	-	AYDS01	42	4722	4504	10/25/13	2/26/17	Contig	FDA	SAMN02415181	GCA_000483975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/975/GCA_000483975.1_ASM48397v1	-	9712
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.59131	30.4	-	NFMX01	104	1651	1558	6/8/17	6/10/17	Contig	Swansea University	SAMN06888350	GCA_002177555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/555/GCA_002177555.1_ASM217755v1	28493321	isolate_W36
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.91077	37.9	-	MDPV01	23	2933	2856	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410720	GCA_001711015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/015/GCA_001711015.1_ASM171101v1	-	Lm227
Mycobacterium tuberculosis M1441	1448687	PRJNA235698	235698	Terrabacteria group	Actinobacteria	4.43626	65.5	-	JKNF01	10	4296	4109	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599033	GCA_000663085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/085/GCA_000663085.1_Myco_tube_M1441_V1	-	M1441
Escherichia coli KTE107	1182703	PRJNA164949	164949	Proteobacteria	Gammaproteobacteria	5.18255	50.7	-	ASVI01	18	5385	4905	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00854655	GCA_000408625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/625/GCA_000408625.1_Esch_coli_KTE107_V1	-	KTE107
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.27887	39.6	-	CKZL01	74	2568	2317	3/21/15	3/4/17	Contig	SC	SAMEA1025967	GCA_001117505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/505/GCA_001117505.1_6840_1_24	-	SMRU1776
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.1023	51.8	-	FFCB01	70	2440	2107	2/9/16	3/21/17	Scaffold	SC	SAMEA2674123	GCA_900041385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/385/GCA_900041385.1_14555_6_2	-	2842STDY5881439
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48794	66.3	-	CTCU01	78	6168	6015	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296432	GCA_001374635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/635/GCA_001374635.1_222_Rw18_contigs_500	-	-
Acinetobacter baumannii 26016_3	1311070	PRJNA195151	195151	Proteobacteria	Gammaproteobacteria	4.37364	39	-	JMOZ01	404	4518	4066	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692990	GCA_000681975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/975/GCA_000681975.1_ASM68197v1	-	26016_3
Streptococcus agalactiae	1311	PRJNA244605	244605	Terrabacteria group	Firmicutes	2.09712	35.4	-	JMBK01	70	2133	2038	6/27/14	3/16/17	Scaffold	"Faculty of Veterinary Science, Chulalongkorn University"	SAMN02727658	GCA_000714695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/695/GCA_000714695.1_StrAga1.0	25502682	ENC06
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.07135	41.2	-	CECC01	57	2070	1977	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234100	GCA_000941855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/855/GCA_000941855.1_Velvet_assembly	-	S9A
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.36977	50.9	-	FTTB01	345	4879	4148	1/28/17	2/26/17	Scaffold	SC	SAMEA2054144	GCA_900157755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/755/GCA_900157755.1_9789_6_11	-	2090STDY5461724
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.06267	28.5	-	FULS01	31	3789	3606	2/14/17	2/23/17	Scaffold	SC	SAMEA3375116	GCA_900164245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/245/GCA_900164245.1_16780_8_50	-	VRECD0162
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.66133	57	-	CCFZ01	228	5796	5243	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602921	GCA_000821665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/665/GCA_000821665.1_20PV	-	-
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.8194	31.2	-	MJYL01	53	1922	1795	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN04532342	GCA_001763285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/285/GCA_001763285.1_ASM176328v1	-	BCW_5914
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.89148	64.2	-	FSDS01	17	4891	4748	12/14/16	3/21/17	Scaffold	SC	SAMEA2275673	GCA_900133805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/805/GCA_900133805.1_12163_1_27	-	951
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.00114	64.2	-	FSDT01	13	5004	4868	12/14/16	3/21/17	Scaffold	SC	SAMEA2275651	GCA_900133815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/815/GCA_900133815.1_12163_1_7	-	929
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.81237	31.2	-	MJZG01	41	1915	1801	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN04532409	GCA_001763685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/685/GCA_001763685.1_ASM176368v1	-	BCW_6913
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.669	56.9	-	CCGB01	198	5905	5434	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602922	GCA_000821685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/685/GCA_000821685.1_21PV	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.32688	28.6	-	FUMF01	37	4104	3917	2/14/17	2/23/17	Scaffold	SC	SAMEA3375082	GCA_900164255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/255/GCA_900164255.1_16780_8_16	-	VRECD0126
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.60015	50.7	-	FTTM01	572	5194	4430	1/28/17	2/26/17	Scaffold	SC	SAMEA1971573	GCA_900157765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/765/GCA_900157765.1_9789_6_48	-	2090STDY5461762
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.06255	41.1	-	CDUV01	81	2055	1944	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233843	GCA_000941915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/915/GCA_000941915.1_Velvet_assembly	-	F1N
Streptococcus agalactiae	1311	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.04962	35.2	-	JUUD01	27	2094	1997	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197967	GCA_001074255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/255/GCA_001074255.1_ASM107425v1	26230489	759_SAGA
Acinetobacter baumannii 26016_7	1311074	PRJNA195155	195155	Proteobacteria	Gammaproteobacteria	4.37137	38.9	-	JMPA01	438	4464	4010	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692991	GCA_000681995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/995/GCA_000681995.1_ASM68199v1	-	26016_7
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.49037	66.3	-	CTCV01	71	6170	6015	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296433	GCA_001374655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/655/GCA_001374655.1_223_Rw138_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15453	51.6	-	FFCN01	85	2510	2149	2/9/16	3/21/17	Scaffold	SC	SAMEA2674163	GCA_900041395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/395/GCA_900041395.1_14555_6_15	-	2842STDY5881452
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07103	39.7	-	CRUQ01	45	2281	2050	3/23/15	3/4/17	Contig	SC	SAMEA1025386	GCA_001117545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/545/GCA_001117545.1_6805_6_15	-	SMRU1719
Escherichia coli KTE108	1182704	PRJNA164951	164951	Proteobacteria	Gammaproteobacteria	5.25481	50.7	-	ASVJ01	7	5421	4987	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00854656	GCA_000408645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/645/GCA_000408645.1_Esch_coli_KTE108_V1	-	KTE108
Mycobacterium tuberculosis M1444	1448688	PRJNA235699	235699	Terrabacteria group	Actinobacteria	4.42298	65.5	-	JKNE01	8	4279	4101	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599034	GCA_000663105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/105/GCA_000663105.1_Myco_tube_M1444_V1	-	M1444
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.99778	37.8	-	MDOC01	35	3060	2987	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410783	GCA_001711035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/035/GCA_001711035.1_ASM171103v1	-	A505
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.76642	30.2	-	NFNA01	98	1834	1714	6/8/17	6/10/17	Contig	Swansea University	SAMN06888347	GCA_002177595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/595/GCA_002177595.1_ASM217759v1	28493321	isolate_W33
Salmonella enterica subsp. enterica serovar Senftenberg str. 361154004	749965	PRJNA46909	46909	Proteobacteria	Gammaproteobacteria	5.0276	51.7	-	AYDO01	110	5073	4814	10/25/13	2/26/17	Contig	FDA	SAMN02415177	GCA_000483995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/995/GCA_000483995.1_ASM48399v1	-	361154004
Staphylococcus aureus SJOS6144	1409596	PRJNA223916	223916	Terrabacteria group	Firmicutes	2.80751	32.8	-	JBJW01	30	2900	2761	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381657	GCA_000541335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/335/GCA_000541335.1_Stap_aure_SJOS6144_V1	-	SJOS6144
Staphylococcus aureus UCIM6070	1409598	PRJNA223918	223918	Terrabacteria group	Firmicutes	2.90819	32.9	-	JBJU01	37	3044	2875	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381659	GCA_000541355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/355/GCA_000541355.1_Stap_aure_UCIM6070_V1	-	UCIM6070
Salmonella enterica subsp. enterica serovar Paratyphi B str. SARA61	702984	PRJNA42917	42917	Proteobacteria	Gammaproteobacteria	4.72276	52.1	-	AYDQ01	76	4760	4534	10/25/13	2/26/17	Contig	FDA	SAMN02415179	GCA_000484015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/015/GCA_000484015.1_ASM48401v1	-	SARA61
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.59297	30.4	-	NFNB01	55	1662	1563	6/8/17	6/10/17	Contig	Swansea University	SAMN06888346	GCA_002177615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/615/GCA_002177615.1_ASM217761v1	28493321	isolate_W32
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.9562	37.9	-	MDPJ01	20	3013	2922	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410587	GCA_001711055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/055/GCA_001711055.1_ASM171105v1	-	Lm69
Mycobacterium tuberculosis M1448	1448689	PRJNA235700	235700	Terrabacteria group	Actinobacteria	4.42061	65.6	-	JKND01	6	4275	4091	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599035	GCA_000663125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/125/GCA_000663125.1_Myco_tube_M1448_V1	-	M1448
Escherichia coli KTE121	1182711	PRJNA164965	164965	Proteobacteria	Gammaproteobacteria	5.47592	50.5	-	ASVK01	6	5555	5178	5/31/13	2/22/17	Scaffold	Broad Institute	SAMN00854663	GCA_000408665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/665/GCA_000408665.1_Esch_coli_KTE121_V1	-	KTE121
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.19719	39.5	-	CMWU01	116	2337	2110	3/22/15	3/4/17	Contig	SC	SAMEA1022800	GCA_001117585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/585/GCA_001117585.1_5919_1_9	-	127
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15779	51.5	-	FEPZ01	85	2504	2148	2/9/16	3/21/17	Scaffold	SC	SAMEA2674424	GCA_900042395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/395/GCA_900042395.1_14324_5_87	-	2842STDY5881620
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48799	66.3	-	CTCW01	77	6171	6013	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296434	GCA_001374675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/675/GCA_001374675.1_224_Rw192_contigs_500	-	-
Acinetobacter baumannii 42057_3	1311135	PRJNA195260	195260	Proteobacteria	Gammaproteobacteria	4.2993	38.9	-	JMPB01	408	4341	3905	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692992	GCA_000682015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/015/GCA_000682015.1_ASM68201v1	-	42057_3
Streptococcus agalactiae	1311	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.09114	35.4	-	JUTW01	44	2162	2043	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197974	GCA_001074285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/285/GCA_001074285.1_ASM107428v1	26230489	765_SAGA
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.06469	41.1	-	CDXW01	57	2057	1960	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234060	GCA_000941955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/955/GCA_000941955.1_Velvet_assembly	-	S6L
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.5237	50.8	-	FTSA01	391	4950	4329	1/28/17	3/2/17	Scaffold	SC	SAMEA2054404	GCA_900157775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/775/GCA_900157775.1_9789_6_78	-	2090STDY5461792
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.21948	28.7	-	FUMM01	32	4033	3851	2/14/17	2/23/17	Scaffold	SC	SAMEA3375118	GCA_900164265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/265/GCA_900164265.1_16780_8_52	-	VRECD0164
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.4062	57.3	-	CCFY01	75	5382	5121	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602923	GCA_000821705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/705/GCA_000821705.1_22PV	-	-
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.81348	31.2	-	MJZV01	41	1918	1797	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN04532438	GCA_001764015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/015/GCA_001764015.1_ASM176401v1	-	BCW_7433
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98532	64	-	FVII01	12	5027	4893	3/10/17	3/18/17	Scaffold	SC	SAMEA2275650	GCA_900133825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/825/GCA_900133825.1_12163_1_6	-	928
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.12987	64.1	-	FSDU01	17	5141	5012	12/14/16	3/21/17	Scaffold	SC	SAMEA2275652	GCA_900133835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/835/GCA_900133835.1_12163_1_9	-	930
Campylobacter coli	195	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.72597	31.5	-	MKCC01	25	1795	1683	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN04532276	GCA_001765195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/195/GCA_001765195.1_ASM176519v1	-	BCW_5137
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.54692	57.1	-	CCGC01	270	5827	5389	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602924	GCA_000821725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/725/GCA_000821725.1_23PV	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.34727	28.2	-	FUMB01	41	4076	3904	2/14/17	2/23/17	Scaffold	SC	SAMEA3375071	GCA_900164275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/275/GCA_900164275.1_16780_8_5	-	VRECD0119
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.54204	50.8	-	FTTR01	435	5076	4348	1/28/17	2/26/17	Scaffold	SC	SAMEA1968289	GCA_900157785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/785/GCA_900157785.1_9789_6_56	-	2090STDY5461770
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.07718	41.2	-	CDVA01	57	2075	1976	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233850	GCA_000942115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/115/GCA_000942115.1_Velvet_assembly	-	type strain: F38
Streptococcus agalactiae	1311	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.20393	35.5	-	JUQU01	69	2301	2175	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03198054	GCA_001074585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/585/GCA_001074585.1_ASM107458v1	26230489	846_SAGA
Acinetobacter baumannii 42057_5	1311137	PRJNA195262	195262	Proteobacteria	Gammaproteobacteria	4.2496	38.7	-	JMPC01	489	4245	3817	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692993	GCA_000682035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/035/GCA_000682035.1_ASM68203v1	-	42057_5
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48965	66.3	-	CTCX01	77	6167	6013	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296435	GCA_001374695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/695/GCA_001374695.1_225_Tsb_2_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12504	51.7	-	FEQD01	92	2482	2162	2/9/16	3/19/17	Scaffold	SC	SAMEA2674444	GCA_900043225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/225/GCA_900043225.1_14355_7_8	-	2842STDY5881637
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07233	39.7	-	CKQP01	61	2284	2068	3/21/15	3/4/17	Contig	SC	SAMEA1024975	GCA_001117625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/625/GCA_001117625.1_6680_7_13	-	SMRU973
Escherichia coli KTE126	1182713	PRJNA164969	164969	Proteobacteria	Gammaproteobacteria	5.05009	50.5	-	ASVL01	10	5194	4838	5/31/13	2/22/17	Scaffold	Broad Institute	SAMN00854665	GCA_000408685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/685/GCA_000408685.1_Esch_coli_KTE126_V1	-	KTE126
Mycobacterium tuberculosis M1449	1448690	PRJNA235701	235701	Terrabacteria group	Actinobacteria	4.42918	65.5	-	JKNC01	11	4286	4099	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599036	GCA_000663145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/145/GCA_000663145.1_Myco_tube_M1449_V1	-	M1449
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.95598	37.9	-	MDPF01	22	3009	2920	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410638	GCA_001711085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/085/GCA_001711085.1_ASM171108v1	-	Lm88
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.63945	30.5	-	NFNC01	51	1723	1623	6/8/17	6/10/17	Contig	Swansea University	SAMN06888345	GCA_002177625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/625/GCA_002177625.1_ASM217762v1	28493321	isolate_W31
Salmonella enterica subsp. enterica serovar Kentucky str. 0253	1156551	PRJNA86767	86767	Proteobacteria	Gammaproteobacteria	4.8141	52.1	-	AYDR01	108	4892	4545	10/25/13	2/26/17	Contig	US Food and Drug Administration	SAMN02415180	GCA_000484035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/035/GCA_000484035.1_ASM48403v1	-	253
Staphylococcus aureus SJUD6120	1409612	PRJNA223932	223932	Terrabacteria group	Firmicutes	2.8462	32.8	-	JBJG01	9	2976	2808	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381673	GCA_000541375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/375/GCA_000541375.1_Stap_aure_SJUD6120_V1	-	SJUD6120
Staphylococcus aureus SJUD6124	1409615	PRJNA223935	223935	Terrabacteria group	Firmicutes	2.81265	32.9	-	JBJE01	24	2946	2787	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381676	GCA_000541395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/395/GCA_000541395.1_Stap_aure_SJUD6124_V1	-	SJUD6124
Salmonella enterica subsp. enterica serovar Agona str. 432613	1124907	PRJNA78413	78413	Proteobacteria	Gammaproteobacteria	4.83438	52	-	AYCX01	97	4971	4590	10/25/13	2/26/17	Contig	FDA	SAMN02415160	GCA_000484055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/055/GCA_000484055.1_ASM48405v1	-	432613
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.57455	30.4	-	NFNG01	79	1658	1524	6/8/17	6/10/17	Contig	Swansea University	SAMN06888341	GCA_002177685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/685/GCA_002177685.1_ASM217768v1	28493321	isolate_W28
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.92993	37.9	-	MDPA01	27	2932	2854	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410691	GCA_001711105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/105/GCA_001711105.1_ASM171110v1	-	OCF07
Mycobacterium tuberculosis M1700	1448691	PRJNA235702	235702	Terrabacteria group	Actinobacteria	4.40182	65.5	-	JKNB01	12	4285	4091	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599037	GCA_000663165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/165/GCA_000663165.1_Myco_tube_M1700_V1	-	M1700
Escherichia coli KTE127	1182714	PRJNA164971	164971	Proteobacteria	Gammaproteobacteria	5.32242	50.7	-	ASVM01	9	5399	5087	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00854666	GCA_000408705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/705/GCA_000408705.1_Esch_coli_KTE127_V1	-	KTE127
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12127	39.5	-	COCZ02	216	2294	2061	3/22/15	3/15/17	Contig	SC	SAMEA1463238	GCA_001117745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/745/GCA_001117745.2_7622_3_91	-	GL3043
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12261	51.8	-	FEQB01	85	2461	2122	2/9/16	3/21/17	Scaffold	SC	SAMEA2674432	GCA_900043235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/235/GCA_900043235.1_14324_5_95	-	2842STDY5881628
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48983	66.3	-	CTCZ01	75	6173	6015	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296436	GCA_001374715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/715/GCA_001374715.1_226_2_5Pc_1_contigs_500	-	-
Acinetobacter baumannii 45052_2	1311142	PRJNA195267	195267	Proteobacteria	Gammaproteobacteria	4.07002	39.1	-	JMPD01	206	3875	3596	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692994	GCA_000682055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/055/GCA_000682055.1_ASM68205v1	-	45052_2
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	1.98666	35.2	-	CQAI01	26	2045	1916	3/22/15	3/17/17	Scaffold	SC	SAMEA1031484	GCA_001087245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/245/GCA_001087245.1_6630_6_21	-	DE-NI-0017
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.08811	41.2	-	CDXM01	57	2098	1998	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234041	GCA_000942175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/175/GCA_000942175.1_Velvet_assembly	-	S2S
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.5898	50.5	-	FTTD01	401	5034	4327	1/28/17	2/26/17	Scaffold	SC	SAMEA2054150	GCA_900157815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/815/GCA_900157815.1_9789_6_17	-	2090STDY5461730
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.43116	28.5	-	FULP01	40	4240	4037	2/14/17	2/23/17	Scaffold	SC	SAMEA3375083	GCA_900164285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/285/GCA_900164285.1_16780_8_17	-	VRECD0127
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.69654	57.1	-	CCGH01	205	5892	5558	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602925	GCA_000821745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/745/GCA_000821745.1_24PV	-	-
Campylobacter coli	195	PRJNA338207	338207	Proteobacteria	delta/epsilon subdivisions	1.71736	31.3	-	MDCN01	27	1782	1688	2/15/17	3/22/17	Scaffold	Iowa State University	SAMN05526190	GCA_002000205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/205/GCA_002000205.1_ASM200020v1	24982085	Tx40
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.02324	64.1	-	FWCY01	8	5110	4940	3/16/17	3/24/17	Scaffold	SC	SAMEA2275818	GCA_900133875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/875/GCA_900133875.1_12163_2_61	-	1092
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.29374	64.1	-	FVIM01	19	5366	5250	3/10/17	8/7/17	Scaffold	SC	SAMEA2071544	GCA_900133995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/133/995/GCA_900133995.1_10250_1_75	-	415
Campylobacter coli	195	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.76991	31.3	-	NFOA01	12	1891	1782	6/8/17	6/10/17	Scaffold	Swansea University	SAMN06888321	GCA_002178015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/015/GCA_002178015.1_ASM217801v1	28493321	isolate_U2
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.32549	57.4	-	CCGD01	47	5252	5027	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602926	GCA_000821765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/765/GCA_000821765.1_25BO	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.12506	28.7	-	FULK01	24	3857	3671	2/14/17	2/23/17	Scaffold	SC	SAMEA3375089	GCA_900164295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/295/GCA_900164295.1_16780_8_23	-	VRECD0133
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.56004	50.9	-	FTSW01	387	5079	4339	1/28/17	2/26/17	Scaffold	SC	SAMEA2054399	GCA_900157825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/825/GCA_900157825.1_9789_6_73	-	2090STDY5461787
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04732	41.2	-	CDTL01	60	2039	1934	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233794	GCA_000942195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/195/GCA_000942195.1_Velvet_assembly	-	B41X
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.18902	35.5	-	CPXP01	31	2274	2151	3/22/15	3/17/17	Scaffold	SC	SAMEA1031495	GCA_001088005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/005/GCA_001088005.1_6630_7_24	-	CZ-NI-003
Acinetobacter baumannii 45057_1	1311128	PRJNA195253	195253	Proteobacteria	Gammaproteobacteria	4.31879	39	-	JMPE01	444	4289	3913	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692995	GCA_000682075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/075/GCA_000682075.1_ASM68207v1	-	45057_1
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.49088	66.3	-	CUXF01	79	6165	6015	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296437	GCA_001374735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/735/GCA_001374735.1_227_2_5Pc_9_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15663	51.5	-	FEQS01	81	2504	2141	2/9/16	3/21/17	Scaffold	SC	SAMEA2674457	GCA_900043245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/245/GCA_900043245.1_14355_8_11	-	2842STDY5881736
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.03921	39.6	-	CNQG02	122	2236	2033	3/23/15	3/11/17	Contig	SC	SAMEA1032704	GCA_001117765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/765/GCA_001117765.2_6952_7_14	-	R34-3174
Escherichia coli KTE130	1182715	PRJNA164973	164973	Proteobacteria	Gammaproteobacteria	5.3072	50.7	-	ASVN01	19	5476	5051	5/31/13	2/22/17	Scaffold	Broad Institute	SAMN00854667	GCA_000408725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/725/GCA_000408725.1_Esch_coli_KTE130_V1	-	KTE130
Mycobacterium tuberculosis M1452	1448692	PRJNA235703	235703	Terrabacteria group	Actinobacteria	4.41215	65.6	-	JKNA01	7	4275	4089	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599038	GCA_000663185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/185/GCA_000663185.1_Myco_tube_M1452_V1	-	M1452
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.85616	37.9	-	MDPE01	16	2927	2855	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410641	GCA_001711125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/125/GCA_001711125.1_ASM171112v1	-	Lm92
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.59418	30.4	-	NFNH01	60	1653	1567	6/8/17	6/10/17	Contig	Swansea University	SAMN06888340	GCA_002177695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/695/GCA_002177695.1_ASM217769v1	28493321	isolate_W27
Salmonella enterica subsp. enterica serovar Agona str. 442692 2-5	1124913	PRJNA78425	78425	Proteobacteria	Gammaproteobacteria	4.74092	52.1	-	AYCR01	98	4816	4531	10/25/13	2/26/17	Contig	FDA	SAMN02415154	GCA_000484075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/075/GCA_000484075.1_ASM48407v1	-	442692 2-5
Staphylococcus aureus WMCA6024	1409616	PRJNA223936	223936	Terrabacteria group	Firmicutes	2.88003	32.8	-	JBJD01	35	3033	2861	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381677	GCA_000541415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/415/GCA_000541415.1_Stap_aure_WMCA6024_V1	-	WMCA6024
Staphylococcus aureus WMCA6025	1409617	PRJNA223937	223937	Terrabacteria group	Firmicutes	2.94195	32.8	-	JBJC01	11	3125	2962	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381678	GCA_000541435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/435/GCA_000541435.1_Stap_aure_WMCA6025_V1	-	WMCA6025
Salmonella enterica subsp. enterica serovar Agona str. 447967 1-1	1124914	PRJNA78427	78427	Proteobacteria	Gammaproteobacteria	4.74552	52.1	-	AYCQ01	60	4802	4548	10/25/13	2/26/17	Contig	FDA	SAMN02415153	GCA_000484095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/095/GCA_000484095.1_ASM48409v1	-	447967 1-1
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.67098	30.2	-	NFNI01	89	1763	1608	6/8/17	6/10/17	Contig	Swansea University	SAMN06888339	GCA_002177735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/735/GCA_002177735.1_ASM217773v1	28493321	isolate_W25
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.9172	37.9	-	MDPC01	36	2935	2835	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410694	GCA_001711145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/145/GCA_001711145.1_ASM171114v1	-	OCF54
Mycobacterium tuberculosis M1456	1448693	PRJNA235704	235704	Terrabacteria group	Actinobacteria	4.41042	65.6	-	JKMZ01	5	4266	4071	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599039	GCA_000663205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/205/GCA_000663205.1_Myco_tube_M1456_V1	-	M1456
Escherichia coli KTE132	1182716	PRJNA164975	164975	Proteobacteria	Gammaproteobacteria	5.24729	50.7	-	ASVO01	15	5370	4948	5/31/13	2/22/17	Scaffold	Broad Institute	SAMN00854668	GCA_000408745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/745/GCA_000408745.1_Esch_coli_KTE132_V1	-	KTE132
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.14735	39.7	-	CMTO01	98	2294	2022	3/23/15	3/6/17	Contig	SC	SAMEA1022876	GCA_001117805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/805/GCA_001117805.1_5737_3_6	-	101_43
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.1116	51.7	-	FESH01	74	2476	2123	2/9/16	3/21/17	Scaffold	SC	SAMEA2673789	GCA_900043255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/255/GCA_900043255.1_14355_5_7	-	2842STDY5881060
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.49013	66.3	-	CTCY01	80	6176	6015	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296438	GCA_001374755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/755/GCA_001374755.1_228_10Pc_8_contigs_500	-	-
Acinetobacter baumannii 25977_9	1310913	PRJNA194990	194990	Proteobacteria	Gammaproteobacteria	4.27791	38.6	-	JMPF01	353	4364	3848	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692960	GCA_000682095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/095/GCA_000682095.1_ASM68209v1	-	25977_9
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.00541	35.2	-	CQEQ01	14	2047	1925	3/23/15	3/17/17	Scaffold	SC	SAMEA1031524	GCA_001088105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/105/GCA_001088105.1_6630_8_2	-	CZ-NI-005
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04609	41.2	-	CDUM01	59	2050	1946	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233828	GCA_000942235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/235/GCA_000942235.1_Velvet_assembly	-	E34W
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.64626	50.9	-	FTTQ01	442	5217	4490	1/28/17	2/26/17	Scaffold	SC	SAMEA2054227	GCA_900157835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/835/GCA_900157835.1_9789_6_38	-	2090STDY5461752
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.32688	28.6	-	FUMS01	32	4108	3920	2/14/17	2/23/17	Scaffold	SC	SAMEA3375072	GCA_900164305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/305/GCA_900164305.1_16780_8_6	-	VRECD0120
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.43255	57.4	-	CCGE01	59	5379	5140	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602927	GCA_000821785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/785/GCA_000821785.1_26BO	-	-
Spiroplasma turonicum	216946	PRJNA253654	253654	Terrabacteria group	Tenericutes	1.26137	24.2	chromosome:NZ_CP013860.1/CP013860.1	-	1	1116	1076	1/12/16	4/11/17	Complete Genome	Academia Sinica	SAMN04219521	GCA_001513715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/513/715/GCA_001513715.1_ASM151371v1	-	Tab4c
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.49579	64.1	-	FSEG01	145	5526	5266	12/14/16	3/21/17	Scaffold	SC	SAMEA2071545	GCA_900134045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/045/GCA_900134045.1_10250_1_78	-	418
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.86176	64.2	-	FVIP01	9	4863	4750	3/10/17	3/18/17	Scaffold	SC	SAMEA2068968	GCA_900134075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/075/GCA_900134075.1_10396_8_5	-	396
Spiroplasma turonicum	216946	PRJNA291635	291635	Terrabacteria group	Tenericutes	1.26137	24.2	chromosome:NZ_CP012328.1/CP012328.1	-	1	1117	1077	8/7/15	4/24/17	Complete Genome	Beltsville Agricultural Research Center	SAMN03948565	GCA_001262715.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/715/GCA_001262715.1_ASM126271v1	26586899	Tab4c
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.51881	57.3	-	CCJA01	126	5594	5268	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602928	GCA_000821805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/805/GCA_000821805.1_27BO	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.13013	28.4	-	FUMH01	27	3775	3634	2/14/17	2/23/17	Scaffold	SC	SAMEA3375075	GCA_900164325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/325/GCA_900164325.1_16780_8_9	-	VRECD0010
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.7789	50.9	-	FTTT01	466	5414	4658	1/28/17	2/26/17	Scaffold	SC	SAMEA2054462	GCA_900157845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/845/GCA_900157845.1_9789_6_82	-	2090STDY5461796
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.0424	41.2	-	CDTS01	55	2027	1926	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233803	GCA_000942295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/295/GCA_000942295.1_Velvet_assembly	-	CU2A
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.15583	35.2	-	CPVL01	36	2241	2109	3/23/15	3/17/17	Scaffold	SC	SAMEA1031420	GCA_001089905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/905/GCA_001089905.1_6630_6_16	-	DE-NI-007
Acinetobacter baumannii 45002_9	1310903	PRJNA194980	194980	Proteobacteria	Gammaproteobacteria	4.36931	39.3	-	JMPG01	497	4384	4022	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692961	GCA_000682115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/115/GCA_000682115.1_ASM68211v1	-	45002_9
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.49373	66.3	-	CTDA01	75	6175	6015	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296439	GCA_001374775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/775/GCA_001374775.1_229_12_5Pc_5_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.12926	51.7	-	FETA01	90	2494	2176	2/9/16	3/19/17	Scaffold	SC	SAMEA2673910	GCA_900043265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/265/GCA_900043265.1_14355_5_45	-	2842STDY5881098
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15067	39.5	-	CKSA01	66	2381	2152	3/21/15	3/4/17	Contig	SC	SAMEA1023838	GCA_001117845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/845/GCA_001117845.1_6680_8_20	-	SMRU212
Escherichia coli KTE134	1182717	PRJNA164977	164977	Proteobacteria	Gammaproteobacteria	5.36403	50.6	-	ASVP01	10	5568	5240	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00854669	GCA_000408765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/765/GCA_000408765.1_Esch_coli_KTE134_V1	-	KTE134
Mycobacterium tuberculosis M1458	1448694	PRJNA235705	235705	Terrabacteria group	Actinobacteria	4.44341	65.5	-	JKMY01	7	4294	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599040	GCA_000663225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/225/GCA_000663225.1_Myco_tube_M1458_V1	-	M1458
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.97825	37.8	-	MDOX01	18	3057	2965	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410825	GCA_001711165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/165/GCA_001711165.1_ASM171116v1	-	A143
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.54236	30.6	-	NFNJ01	208	1607	1480	6/8/17	6/10/17	Contig	Swansea University	SAMN06888338	GCA_002177745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/745/GCA_002177745.1_ASM217774v1	28493321	isolate_W24
Salmonella enterica subsp. enterica serovar Agona str. 409753-6	1124911	PRJNA78421	78421	Proteobacteria	Gammaproteobacteria	4.78084	52	-	AYCT01	50	4878	4620	10/25/13	2/26/17	Contig	FDA	SAMN02415156	GCA_000484115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/115/GCA_000484115.1_ASM48411v1	-	409753-6
Staphylococcus aureus AMMC6106	1409618	PRJNA223938	223938	Terrabacteria group	Firmicutes	2.8829	32.9	-	JBJB01	25	3006	2833	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381679	GCA_000541455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/455/GCA_000541455.1_Stap_aure_AMMC6106_V1	-	AMMC6106
Staphylococcus aureus KINW6023	1409619	PRJNA223939	223939	Terrabacteria group	Firmicutes	2.89089	32.8	-	JBJA01	33	3028	2842	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381680	GCA_000541475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/475/GCA_000541475.1_Stap_aure_KINW6023_V1	-	KINW6023
Salmonella enterica subsp. enterica serovar Agona str. 339787	1124918	PRJNA78461	78461	Proteobacteria	Gammaproteobacteria	4.73241	52.1	-	AYCM01	62	4793	4537	10/25/13	2/26/17	Contig	FDA	SAMN02415149	GCA_000484135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/135/GCA_000484135.1_ASM48413v1	-	339787
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.57159	30.4	-	NFNM01	67	1659	1538	6/8/17	6/10/17	Contig	Swansea University	SAMN06888335	GCA_002177805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/805/GCA_002177805.1_ASM217780v1	28493321	isolate_W20
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.87892	37.9	-	MDPR01	21	2904	2827	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410736	GCA_001711185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/185/GCA_001711185.1_ASM171118v1	-	Lm234
Mycobacterium tuberculosis M1459	1448695	PRJNA235706	235706	Terrabacteria group	Actinobacteria	4.43302	65.6	-	JKMX01	8	4302	4098	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599041	GCA_000663245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/245/GCA_000663245.1_Myco_tube_M1459_V1	-	M1459
Escherichia coli KTE155	1182729	PRJNA165001	165001	Proteobacteria	Gammaproteobacteria	4.68614	50.7	-	ASVQ01	5	4758	4471	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00854681	GCA_000408785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/785/GCA_000408785.1_Esch_coli_KTE155_V1	-	KTE155
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.03628	39.7	-	CPMU01	68	2233	2024	3/23/15	3/4/17	Contig	SC	SAMEA1020138	GCA_001117885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/885/GCA_001117885.1_6289_7_13	-	SN35343
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15679	51.5	-	FEXA01	77	2518	2157	2/9/16	3/21/17	Scaffold	SC	SAMEA2674210	GCA_900043275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/275/GCA_900043275.1_14324_4_95	-	2842STDY5881340
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48845	66.3	-	CUXH01	78	6171	6011	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296440	GCA_001374795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/795/GCA_001374795.1_230_15Pc_4_contigs_500	-	-
Acinetobacter baumannii 25691_7	1310931	PRJNA195008	195008	Proteobacteria	Gammaproteobacteria	4.39732	38.8	-	JMPH01	607	4460	4045	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692986	GCA_000682135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/135/GCA_000682135.1_ASM68213v1	-	25691_7
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.12189	35.4	-	CPXG01	13	2203	2082	3/22/15	3/17/17	Scaffold	SC	SAMEA1031477	GCA_001091485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/485/GCA_001091485.1_6630_5_22	-	DK-NI-022
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.0528	41.2	-	CDUF01	57	2043	1946	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233822	GCA_000942355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/355/GCA_000942355.1_Velvet_assembly	-	E21U
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.46316	50.9	-	FTTH01	576	5084	4288	1/28/17	3/2/17	Scaffold	SC	SAMEA2054463	GCA_900157855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/855/GCA_900157855.1_9789_6_83	-	2090STDY5461797
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.28917	28.7	-	FUMV01	55	4158	3959	2/14/17	2/23/17	Scaffold	SC	SAMEA3375121	GCA_900164335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/335/GCA_900164335.1_16780_8_55	-	VRECD0167
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.62462	57	-	CCGG01	111	5775	5441	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602929	GCA_000821825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/825/GCA_000821825.1_28BO	-	-
Campylobacter coli BIGS0008	1247733	PRJNA177352	177352	Proteobacteria	delta/epsilon subdivisions	3.06919	31.9	-	ANGS01	478	-	-	11/23/12	11/23/12	Contig	Swansea University	SAMN01795764	GCA_000314165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/165/GCA_000314165.1_ASM31416v1	23279096	BIGS0008
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23155	64	-	FVIT01	26	5267	5151	3/10/17	3/18/17	Scaffold	SC	SAMEA2071191	GCA_900134085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/085/GCA_900134085.1_10625_4_52	-	52
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.6097	64	-	FSEH01	38	5788	5538	12/14/16	3/21/17	Scaffold	SC	SAMEA2070162	GCA_900134095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/095/GCA_900134095.1_10625_4_35	-	35
Campylobacter coli BIGS0016	1247739	PRJNA177352	177352	Proteobacteria	delta/epsilon subdivisions	0.813032	32.5	-	ANHA01	866	-	-	11/23/12	11/23/12	Contig	Swansea University	SAMN01795900	GCA_000314325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/325/GCA_000314325.1_ASM31432v1	23279096	BIGS0016
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.51109	57.3	-	CCGF01	85	5686	5407	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602930	GCA_000821845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/845/GCA_000821845.1_29BO	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.36608	28.5	-	FUMQ01	26	4105	3953	2/14/17	2/23/17	Scaffold	SC	SAMEA3375127	GCA_900164345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/345/GCA_900164345.1_16780_8_61	-	VRECD0175
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.48819	50.8	-	FTSZ01	369	5010	4253	1/28/17	2/26/17	Scaffold	SC	SAMEA2054146	GCA_900157885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/885/GCA_900157885.1_9789_6_13	-	2090STDY5461726
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.0464	41.2	-	CEBQ01	53	2037	1936	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234063	GCA_000942415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/415/GCA_000942415.1_Velvet_assembly	-	S6O
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.08751	35.4	-	CQBE01	22	2155	2043	3/23/15	3/17/17	Scaffold	SC	SAMEA1031433	GCA_001093745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/745/GCA_001093745.1_6630_5_12	-	DK-NI-009
Acinetobacter baumannii 24812_2	1310846	PRJNA194922	194922	Proteobacteria	Gammaproteobacteria	4.01476	39.2	-	JMNN01	91	3972	3714	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02649416	GCA_000682175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/175/GCA_000682175.1_ASM68217v1	-	24812_2
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.487	66.3	-	CUXG01	77	6172	6015	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296441	GCA_001374815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/815/GCA_001374815.1_231_15_121B_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16876	51.5	-	FEXY01	91	2516	2140	2/9/16	3/21/17	Scaffold	SC	SAMEA2674541	GCA_900043285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/285/GCA_900043285.1_14355_7_75	-	2842STDY5881704
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00487	39.7	-	CNSC02	120	2174	1981	3/22/15	3/5/17	Contig	SC	SAMEA1032450	GCA_001117905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/905/GCA_001117905.2_6999_2_8	-	R34-3214
Escherichia coli KTE170	1182737	PRJNA165017	165017	Proteobacteria	Gammaproteobacteria	5.48924	50.6	-	ASVS01	13	5636	5283	5/31/13	2/23/17	Scaffold	Broad Institute	SAMN00854689	GCA_000408825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/408/825/GCA_000408825.1_Esch_coli_KTE170_V1	-	KTE170
Mycobacterium tuberculosis M1461	1448696	PRJNA235707	235707	Terrabacteria group	Actinobacteria	4.4498	65.4	-	JKMW01	6	4290	4087	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599042	GCA_000663265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/265/GCA_000663265.1_Myco_tube_M1461_V1	-	M1461
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.99736	37.9	-	MDOW01	27	3029	2935	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410769	GCA_001711195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/195/GCA_001711195.1_ASM171119v1	-	A146
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.64907	30.5	-	NFNN01	82	1723	1617	6/8/17	6/10/17	Contig	Swansea University	SAMN06888334	GCA_002177835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/835/GCA_002177835.1_ASM217783v1	28493321	isolate_W2
Salmonella enterica subsp. enterica serovar Agona str. 447967 2-1	1124915	PRJNA78429	78429	Proteobacteria	Gammaproteobacteria	4.74639	52.1	-	AYCP01	70	4803	4550	10/25/13	2/26/17	Contig	FDA	SAMN02415152	GCA_000484155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/155/GCA_000484155.1_ASM48415v1	-	447967 2-1
Staphylococcus aureus KINW6027	1409623	PRJNA223944	223944	Terrabacteria group	Firmicutes	2.85481	32.9	-	JBIZ01	26	2994	2821	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381684	GCA_000541495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/495/GCA_000541495.1_Stap_aure_KINW6027_V1	-	KINW6027
Staphylococcus aureus KINB6023	1409624	PRJNA223945	223945	Terrabacteria group	Firmicutes	2.93006	32.9	-	JBIY01	18	3089	2910	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381685	GCA_000541515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/515/GCA_000541515.1_Stap_aure_KINB6023_V1	-	KINB6023
Salmonella enterica subsp. enterica serovar Agona str. 460004 1-1	1124916	PRJNA78431	78431	Proteobacteria	Gammaproteobacteria	4.74325	52.1	-	AYCO01	77	4809	4539	10/25/13	2/26/17	Contig	FDA	SAMN02415151	GCA_000484175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/175/GCA_000484175.1_ASM48417v1	-	460004 1-1
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.68077	30.3	-	NFNP01	52	1767	1636	6/8/17	6/10/17	Contig	Swansea University	SAMN06888332	GCA_002177865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/865/GCA_002177865.1_ASM217786v1	28493321	isolate_W18
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.95556	37.9	-	MDPI01	21	3002	2922	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410629	GCA_001711215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/215/GCA_001711215.1_ASM171121v1	-	Lm77
Mycobacterium tuberculosis M1475	1448697	PRJNA235708	235708	Terrabacteria group	Actinobacteria	4.42364	65.5	-	JKMV01	8	4286	4105	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599043	GCA_000663285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/285/GCA_000663285.1_Myco_tube_M1475_V1	-	M1475
Escherichia coli E2265	1331062	PRJNA201655	201655	Proteobacteria	Gammaproteobacteria	5.07063	50.4	-	ASRW01	410	5404	5007	6/24/13	2/22/17	Scaffold	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN02470023	GCA_000415485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/415/485/GCA_000415485.1_E2265_1	-	E2265
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.02405	39.8	-	CPSI01	66	2213	2008	3/23/15	3/11/17	Contig	SC	SAMEA1020575	GCA_001118025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/025/GCA_001118025.1_6289_7_2	-	SN39039
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15256	51.5	-	FEYB01	87	2508	2138	2/9/16	3/21/17	Scaffold	SC	SAMEA2674558	GCA_900043295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/295/GCA_900043295.1_14355_7_92	-	2842STDY5881721
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.49047	66.3	-	CUXJ01	78	6173	6016	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296442	GCA_001374835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/835/GCA_001374835.1_232_15_221Ba_contigs_500	-	-
Acinetobacter baumannii 496487	1310625	PRJNA194701	194701	Proteobacteria	Gammaproteobacteria	4.30575	38.9	-	JMNR01	335	4318	3962	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692964	GCA_000682215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/215/GCA_000682215.1_ASM68221v1	-	496487
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.18801	35.5	-	CQBS01	36	2269	2146	3/23/15	3/17/17	Scaffold	SC	SAMEA1031483	GCA_001097365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/365/GCA_001097365.1_6630_7_23	-	CZ-NI-002
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03628	41.2	-	CDUK01	54	2020	1929	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233825	GCA_000942435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/435/GCA_000942435.1_Velvet_assembly	-	type strain: E24
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.61919	50.7	-	FTTL01	529	5204	4380	1/28/17	2/26/17	Scaffold	SC	SAMEA2054168	GCA_900157895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/895/GCA_900157895.1_9789_6_34	-	2090STDY5461748
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.44609	28.4	-	FUMR01	35	4240	4024	2/14/17	2/23/17	Scaffold	SC	SAMEA3375095	GCA_900164355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/355/GCA_900164355.1_16780_8_29	-	VRECD0139
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.76659	57.1	-	CCGK01	240	6019	5664	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602931	GCA_000821865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/865/GCA_000821865.1_30BO	-	-
Campylobacter coli BIGS0020	1247743	PRJNA177352	177352	Proteobacteria	delta/epsilon subdivisions	1.50542	32	-	ANHE01	691	-	-	11/23/12	11/23/12	Contig	Swansea University	SAMN01795904	GCA_000314405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/405/GCA_000314405.1_ASM31440v1	23279096	BIGS0020
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.22774	64	-	FVIU01	126	5336	5109	3/10/17	3/18/17	Scaffold	SC	SAMEA2070285	GCA_900134115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/115/GCA_900134115.1_10625_4_53	-	53
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.19856	64.1	-	FSEK01	10	5261	5139	12/14/16	3/21/17	Scaffold	SC	SAMEA2259584	GCA_900134155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/155/GCA_900134155.1_11861_7_48	-	779
Campylobacter coli BIGS0023	1247745	PRJNA177352	177352	Proteobacteria	delta/epsilon subdivisions	1.43105	32.3	-	ANHH01	446	-	-	11/23/12	11/23/12	Contig	Swansea University	SAMN01795907	GCA_000314465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/465/GCA_000314465.1_ASM31446v1	23279096	BIGS0023
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.75099	57.1	-	CCGI01	128	5985	5663	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602932	GCA_000821885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/885/GCA_000821885.1_31AVR	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.24996	28.9	-	FUMW01	39	4026	3851	2/14/17	2/23/17	Scaffold	SC	SAMEA3375078	GCA_900164375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/375/GCA_900164375.1_16780_8_12	-	VRECD0039
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.49688	50.8	-	FTSP01	357	5040	4260	1/28/17	2/26/17	Scaffold	SC	SAMEA2054169	GCA_900157905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/905/GCA_900157905.1_9789_6_36	-	2090STDY5461750
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04794	41.2	-	CDVT01	63	2038	1929	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233797	GCA_000942455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/455/GCA_000942455.1_Velvet_assembly	-	B44R
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.0544	35.3	-	CPYN01	18	2130	2022	3/23/15	3/17/17	Scaffold	SC	SAMEA1031529	GCA_001098005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/005/GCA_001098005.1_6630_6_7	-	BG-NI-010
Acinetobacter baumannii 1146103	1310656	PRJNA194732	194732	Proteobacteria	Gammaproteobacteria	4.39883	39.1	-	JMNS01	375	4566	4168	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692965	GCA_000682235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/235/GCA_000682235.1_ASM68223v1	-	1146103
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.4862	66.3	-	CTDB01	76	6165	6014	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296552	GCA_001374855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/855/GCA_001374855.1_233_15_321Bb_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.17138	51.6	-	FEYJ01	68	2515	2178	2/9/16	3/19/17	Scaffold	SC	SAMEA2674489	GCA_900043305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/305/GCA_900043305.1_14355_8_27	-	2842STDY5881752
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05133	39.6	-	CNQI02	133	2243	2028	3/22/15	3/5/17	Contig	SC	SAMEA1032607	GCA_001118045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/045/GCA_001118045.2_6952_7_17	-	R34-3177
Escherichia coli MC6003	1333597	PRJNA203060	203060	Proteobacteria	Gammaproteobacteria	5.01938	50.6	-	ATNV01	163	5143	4841	7/3/13	2/22/17	Scaffold	The Genome Institute	SAMN02436757	GCA_000418595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/595/GCA_000418595.1_E_coliMC6003-1.0	-	MC6003
Mycobacterium tuberculosis M1481	1448698	PRJNA235709	235709	Terrabacteria group	Actinobacteria	4.42044	65.5	-	JKMU01	5	4269	4086	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599044	GCA_000663305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/305/GCA_000663305.1_Myco_tube_M1481_V1	-	M1481
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.94996	37.8	-	MDQB01	20	3017	2934	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410711	GCA_001711245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/245/GCA_001711245.1_ASM171124v1	-	Lm221
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.64653	30.3	-	NFNR01	62	1747	1631	6/8/17	6/10/17	Contig	Swansea University	SAMN06888330	GCA_002177885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/885/GCA_002177885.1_ASM217788v1	28493321	isolate_W16
Salmonella enterica subsp. enterica serovar Newport str. 637564_17	984250	PRJNA62865	62865	Proteobacteria	Gammaproteobacteria	4.67444	52.2	-	AYDM01	82	4764	4482	10/25/13	2/26/17	Contig	FDA	SAMN02415175	GCA_000484215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/215/GCA_000484215.1_ASM48421v1	-	637564_17
Staphylococcus aureus UCIM6084	1409625	PRJNA223947	223947	Terrabacteria group	Firmicutes	2.85329	32.8	-	JBIX01	29	2962	2816	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381686	GCA_000541535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/535/GCA_000541535.1_Stap_aure_UCIM6084_V1	-	UCIM6084
Staphylococcus aureus KINB6024	1409627	PRJNA223949	223949	Terrabacteria group	Firmicutes	2.8626	32.9	-	JBIV01	9	3001	2840	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381688	GCA_000541555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/555/GCA_000541555.1_Stap_aure_KINB6024_V1	-	KINB6024
Salmonella enterica subsp. enterica serovar Agona str. SA-5	1003189	PRJNA65253	65253	Proteobacteria	Gammaproteobacteria	4.76723	52.1	-	AYDL01	58	4845	4450	10/25/13	2/26/17	Contig	FDA	SAMN02415174	GCA_000484235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/235/GCA_000484235.1_ASM48423v1	-	SA-5
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.68226	30.7	-	NFNS01	135	1775	1661	6/8/17	6/10/17	Contig	Swansea University	SAMN06888329	GCA_002177905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/905/GCA_002177905.1_ASM217790v1	28493321	isolate_W15
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.91555	37.9	-	MDPH01	18	2980	2908	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410631	GCA_001711255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/255/GCA_001711255.1_ASM171125v1	-	Lm78
Mycobacterium tuberculosis M1488	1448699	PRJNA235710	235710	Terrabacteria group	Actinobacteria	4.42403	65.6	-	JKMT01	11	4311	4101	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599045	GCA_000663325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/325/GCA_000663325.1_Myco_tube_M1488_V1	-	M1488
Escherichia coli MC6002	1333596	PRJNA203059	203059	Proteobacteria	Gammaproteobacteria	5.10804	50.6	-	ATNW01	225	5339	5022	7/3/13	2/25/17	Scaffold	The Genome Institute	SAMN02436900	GCA_000418615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/615/GCA_000418615.2_E_coliMC6002-1.0	-	MC6002
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05943	39.6	-	CNTC02	175	2218	2018	3/23/15	3/5/17	Contig	SC	SAMEA1032748	GCA_001118085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/085/GCA_001118085.2_6999_4_2	-	80104
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.20674	51.6	-	FFAM01	77	2601	2204	2/9/16	3/21/17	Scaffold	SC	SAMEA2674252	GCA_900043315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/315/GCA_900043315.1_14555_5_56	-	2842STDY5881397
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48657	66.3	-	CTDO01	78	6167	6010	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296553	GCA_001374875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/875/GCA_001374875.1_252_12_5Pc_1_1_contigs_500	-	-
Acinetobacter baumannii 754286	1310668	PRJNA194744	194744	Proteobacteria	Gammaproteobacteria	4.28124	38.7	-	JMNU01	497	4295	3876	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692968	GCA_000682255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/255/GCA_000682255.1_ASM68225v1	-	754286
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.04967	35.2	-	CQEF01	23	2108	2010	3/23/15	3/17/17	Scaffold	SC	SAMEA1031430	GCA_001098165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/165/GCA_001098165.1_6630_5_7	-	DK-NI-003
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05944	41.1	-	CDXG01	57	2054	1952	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234036	GCA_000942475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/475/GCA_000942475.1_Velvet_assembly	-	S1N
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.61705	50.5	-	FTTE01	403	5207	4357	1/28/17	2/26/17	Scaffold	SC	SAMEA2054131	GCA_900157915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/915/GCA_900157915.1_9789_6_9	-	2090STDY5461722
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.44816	28.5	-	FUMY01	357	4118	3917	2/14/17	2/23/17	Scaffold	SC	SAMEA3375084	GCA_900164385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/385/GCA_900164385.1_16780_8_18	-	VRECD0128
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.53912	57.3	-	CCGJ01	54	5528	5260	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602933	GCA_000821905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/905/GCA_000821905.1_32AVR	-	-
Campylobacter coli BIGS0024	1247746	PRJNA177352	177352	Proteobacteria	delta/epsilon subdivisions	1.57098	32	-	ANHI01	532	-	-	11/23/12	11/23/12	Contig	Swansea University	SAMN01795908	GCA_000314485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/314/485/GCA_000314485.1_ASM31448v1	23279096	BIGS0024
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.1236	64.1	-	FSEL01	26	5177	5012	12/14/16	3/21/17	Scaffold	SC	SAMEA2259585	GCA_900134175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/175/GCA_900134175.1_11861_7_49	-	780
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.86818	64.1	-	FVIW01	11	4820	4672	3/10/17	3/18/17	Scaffold	SC	SAMEA2259571	GCA_900134185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/185/GCA_900134185.1_11861_7_34	-	766
Campylobacter coli	195	PRJNA294867	294867	Proteobacteria	delta/epsilon subdivisions	1.69575	31.3	-	LKCQ01	27	1764	1616	3/3/16	3/3/16	Contig	North Carolina State University	SAMN04038079	GCA_001579545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/579/545/GCA_001579545.1_ASM157954v1	-	-
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.44759	57.3	-	CCGL01	68	5407	5155	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602934	GCA_000821925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/925/GCA_000821925.1_34AVR	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.28287	28.7	-	FUMJ01	43	4136	3953	2/14/17	2/23/17	Scaffold	SC	SAMEA3375091	GCA_900164395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/395/GCA_900164395.1_16780_8_25	-	VRECD0135
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.77175	50.7	-	FTTK01	422	5331	4604	1/28/17	2/26/17	Scaffold	SC	SAMEA1965455	GCA_900157925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/925/GCA_900157925.1_9789_6_44	-	2090STDY5461758
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04551	41.1	-	CDVH01	58	2046	1932	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233861	GCA_000942495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/495/GCA_000942495.1_Velvet_assembly	-	F55H
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.02745	35.3	-	CQDN01	16	2093	1978	3/23/15	3/17/17	Scaffold	SC	SAMEA1031447	GCA_001099185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/185/GCA_001099185.1_6630_7_22	-	CZ-NI-001
Acinetobacter baumannii 45075_10	1311097	PRJNA195178	195178	Proteobacteria	Gammaproteobacteria	3.94041	39.1	-	JMNV01	57	3773	3535	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02646385	GCA_000682275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/275/GCA_000682275.1_ASM68227v1	-	45075_10
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.489	66.3	-	CTDQ01	73	6177	6012	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296554	GCA_001374895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/895/GCA_001374895.1_253_12_5Pc_7_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.11159	51.8	-	FFCO01	78	2452	2112	2/9/16	3/21/17	Scaffold	SC	SAMEA2674167	GCA_900043325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/325/GCA_900043325.1_14555_6_16	-	2842STDY5881453
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.01865	39.7	-	CKDD01	32	2230	1989	3/21/15	3/10/17	Contig	SC	SAMEA1023728	GCA_001118145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/145/GCA_001118145.1_6593_5_24	-	28F
Escherichia coli MC23	1333595	PRJNA203053	203053	Proteobacteria	Gammaproteobacteria	5.1311	50.6	-	ATNX01	213	5360	5035	7/3/13	2/22/17	Scaffold	The Genome Institute	SAMN02436901	GCA_000418635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/635/GCA_000418635.1_E_coliMC23-1.0	-	MC23
Mycobacterium tuberculosis M1520	1448700	PRJNA235711	235711	Terrabacteria group	Actinobacteria	4.44712	65.4	-	JKMS01	6	4291	4091	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599046	GCA_000663345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/345/GCA_000663345.1_Myco_tube_M1520_V1	-	M1520
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.91513	37.9	-	MDPG01	15	2990	2907	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410634	GCA_001711285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/285/GCA_001711285.1_ASM171128v1	-	Lm84
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.61763	30.5	-	NFNT01	78	1698	1599	6/8/17	6/10/17	Contig	Swansea University	SAMN06888328	GCA_002177935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/935/GCA_002177935.1_ASM217793v1	28493321	isolate_W14
Salmonella enterica subsp. enterica serovar Agona str. 311387-1	1124920	PRJNA78465	78465	Proteobacteria	Gammaproteobacteria	4.71472	52.1	-	AYCL01	55	4768	4526	10/25/13	2/26/17	Contig	FDA	SAMN02415148	GCA_000484255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/255/GCA_000484255.1_ASM48425v1	-	311387-1
Staphylococcus aureus SMMC6108	1409629	PRJNA223951	223951	Terrabacteria group	Firmicutes	2.92899	32.9	-	JBIU01	34	3093	2916	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381690	GCA_000541575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/575/GCA_000541575.1_Stap_aure_SMMC6108_V1	-	SMMC6108
Staphylococcus aureus AMMC6111	1409630	PRJNA223952	223952	Terrabacteria group	Firmicutes	2.84774	32.8	-	JBIT01	36	2949	2800	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381691	GCA_000541595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/595/GCA_000541595.1_Stap_aure_AMMC6111_V1	-	AMMC6111
Salmonella enterica subsp. enterica serovar Pullorum str. 13036	1079471	PRJNA72639	72639	Proteobacteria	Gammaproteobacteria	4.75084	52.2	-	AYDA01	48	4859	4413	10/25/13	2/26/17	Contig	FDA	SAMN02415163	GCA_000484295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/295/GCA_000484295.1_ASM48429v1	-	13036
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.67391	30.1	-	NFNU01	141	1743	1588	6/8/17	6/10/17	Contig	Swansea University	SAMN06888327	GCA_002177955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/955/GCA_002177955.1_ASM217795v1	28493321	isolate_W13
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.88876	37.9	-	MDPS01	19	2925	2845	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410727	GCA_001711295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/295/GCA_001711295.1_ASM171129v1	-	Lm232
Mycobacterium tuberculosis M1533	1448701	PRJNA235712	235712	Terrabacteria group	Actinobacteria	4.41823	65.6	-	JKMR01	8	4283	4098	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599047	GCA_000663365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/365/GCA_000663365.1_Myco_tube_M1533_V1	-	M1533
Escherichia coli MC21	1333594	PRJNA203052	203052	Proteobacteria	Gammaproteobacteria	5.13585	50.6	-	ATNY01	227	5368	5048	7/3/13	2/22/17	Scaffold	The Genome Institute	SAMN02436758	GCA_000418655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/655/GCA_000418655.1_E_coliMC21-1.0	-	MC21
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.17441	39.6	-	CLMF01	60	2386	2126	3/21/15	3/10/17	Contig	SC	SAMEA1029050	GCA_001118245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/245/GCA_001118245.1_6938_7_11	-	SMRU2699
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16962	51.6	-	FFCQ01	79	2515	2180	2/9/16	3/19/17	Scaffold	SC	SAMEA2674173	GCA_900043335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/335/GCA_900043335.1_14555_6_18	-	2842STDY5881455
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48755	66.3	-	CTDR01	78	6172	6014	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296555	GCA_001374915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/915/GCA_001374915.1_254_15Pc_6_contigs_500	-	-
Acinetobacter baumannii 940793	1310633	PRJNA194709	194709	Proteobacteria	Gammaproteobacteria	4.34096	38.9	-	JMNW01	473	4342	3953	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692966	GCA_000682295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/295/GCA_000682295.1_ASM68229v1	-	940793
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.10087	35.3	-	CPXO01	24	2181	2075	3/22/15	3/17/17	Scaffold	SC	SAMEA1031517	GCA_001100165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/165/GCA_001100165.1_6630_5_19	-	DK-NI-016
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.09603	41.1	-	CDTZ01	61	2082	1971	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233813	GCA_000942535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/535/GCA_000942535.1_Velvet_assembly	-	E04J
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.68763	50.7	-	FTTI01	476	5226	4503	1/28/17	2/26/17	Scaffold	SC	SAMEA2054465	GCA_900157945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/945/GCA_900157945.1_9789_6_85	-	2090STDY5461799
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.20537	28.9	-	FUMN01	33	3993	3809	2/14/17	2/23/17	Scaffold	SC	SAMEA3375122	GCA_900164405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/405/GCA_900164405.1_16780_8_56	-	VRECD0168
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.61425	57.1	-	CCGM01	64	5707	5400	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602935	GCA_000821945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/945/GCA_000821945.1_36AVR	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.17453	64.1	-	FSEJ01	15	5213	5079	12/14/16	3/21/17	Scaffold	SC	SAMEA2259549	GCA_900134195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/195/GCA_900134195.1_11861_7_13	-	744
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.11906	64.2	-	FSEM01	25	5174	5009	12/14/16	3/21/17	Scaffold	SC	SAMEA2259586	GCA_900134205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/205/GCA_900134205.1_11861_7_50	-	781
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.43238	57.4	-	CCGN01	73	5419	5132	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602936	GCA_000821965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/965/GCA_000821965.1_37AVR	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.25755	28.6	-	FUMI01	37	4073	3882	2/14/17	2/23/17	Scaffold	SC	SAMEA3375130	GCA_900164415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/415/GCA_900164415.1_16780_8_64	-	VRECD0178
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.55047	50.9	-	FTTU01	642	5159	4361	1/28/17	2/26/17	Scaffold	SC	SAMEA2054231	GCA_900157955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/955/GCA_900157955.1_9789_6_42	-	2090STDY5461756
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05167	41.1	-	CDWO01	67	2053	1941	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233846	GCA_000942555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/555/GCA_000942555.1_Velvet_assembly	-	F25R
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.13347	35.5	-	CPVU01	23	2231	2114	3/23/15	3/17/17	Scaffold	SC	SAMEA1031501	GCA_001101765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/765/GCA_001101765.1_6630_6_13	-	DE-NI-003
Acinetobacter baumannii 6112	1310669	PRJNA194745	194745	Proteobacteria	Gammaproteobacteria	4.33372	38.6	-	JMNY01	467	4344	3830	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692969	GCA_000682335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/335/GCA_000682335.1_ASM68233v1	-	6112
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48689	66.3	-	CTDT01	81	6169	6010	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296556	GCA_001374935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/935/GCA_001374935.1_257_Tsb_Bead_Pool_1_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.20817	51.6	-	FFBV01	103	2591	2216	2/9/16	3/21/17	Scaffold	SC	SAMEA2674323	GCA_900043505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/505/GCA_900043505.1_14555_5_91	-	2842STDY5881432
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09226	39.7	-	CKYW01	61	2316	2093	3/21/15	3/11/17	Contig	SC	SAMEA1025284	GCA_001118405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/405/GCA_001118405.1_6830_3_5	-	SMRU1637
Escherichia coli MC19	1333593	PRJNA203051	203051	Proteobacteria	Gammaproteobacteria	5.1176	50.6	-	ATNZ01	298	5354	5039	7/3/13	2/22/17	Scaffold	The Genome Institute	SAMN02436713	GCA_000418675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/675/GCA_000418675.1_E_coliMC19-1.0	-	MC19
Mycobacterium tuberculosis M1545	1448702	PRJNA235713	235713	Terrabacteria group	Actinobacteria	4.43156	65.5	-	JKMQ01	4	4296	4098	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599048	GCA_000663385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/385/GCA_000663385.1_Myco_tube_M1545_V1	-	M1545
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.98731	37.9	-	MDQC01	23	3034	2944	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410710	GCA_001711325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/325/GCA_001711325.1_ASM171132v1	-	Lm220
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.61463	30.4	-	NFNW01	50	1694	1584	6/8/17	6/10/17	Contig	Swansea University	SAMN06888325	GCA_002177965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/965/GCA_002177965.1_ASM217796v1	28493321	isolate_W11
Salmonella enterica subsp. enterica serovar Agona str. 0292	1029989	PRJNA66689	66689	Proteobacteria	Gammaproteobacteria	4.95207	52	-	AYDU01	166	5181	4734	10/25/13	2/26/17	Contig	FDA	SAMN02415183	GCA_000484335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/335/GCA_000484335.1_ASM48433v1	-	292
Staphylococcus aureus OCMM6075	1409631	PRJNA223953	223953	Terrabacteria group	Firmicutes	2.92917	32.8	-	JBIS01	21	3076	2905	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381692	GCA_000541615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/615/GCA_000541615.1_Stap_aure_OCMM6075_V1	-	OCMM6075
Staphylococcus aureus FVRH6035	1409632	PRJNA223954	223954	Terrabacteria group	Firmicutes	2.88058	32.8	-	JBIR01	20	3015	2838	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381693	GCA_000541635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/635/GCA_000541635.1_Stap_aure_FVRH6035_V1	-	FVRH6035
Salmonella enterica subsp. enterica serovar Agona str. 557928	1124909	PRJNA78417	78417	Proteobacteria	Gammaproteobacteria	4.95538	51.9	-	AYCV01	111	5056	4742	10/25/13	2/26/17	Contig	FDA	SAMN02415158	GCA_000484375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/375/GCA_000484375.1_ASM48437v1	-	557928
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.64522	30.4	-	NFNX01	59	1745	1620	6/8/17	6/10/17	Contig	Swansea University	SAMN06888324	GCA_002177985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/985/GCA_002177985.1_ASM217798v1	28493321	isolate_W10
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.95262	37.9	-	MDOS01	19	2998	2921	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410836	GCA_001711345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/345/GCA_001711345.1_ASM171134v1	-	A23
Mycobacterium tuberculosis M1559	1448703	PRJNA235714	235714	Terrabacteria group	Actinobacteria	4.41874	65.6	-	JKMP01	78	4339	4117	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599049	GCA_000663405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/405/GCA_000663405.1_Myco_tube_M1559_V1	-	M1559
Escherichia coli AB43739056-isolate1	1333592	PRJNA203081	203081	Proteobacteria	Gammaproteobacteria	5.12408	50.6	-	ATOA01	192	5341	5015	7/3/13	2/25/17	Scaffold	The Genome Institute	SAMN02436759	GCA_000418695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/695/GCA_000418695.2_E_coliAB43739056-isolate1-1.0	-	AB43739056-isolate1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.01956	39.7	-	CNVL02	162	2176	1985	3/23/15	3/5/17	Contig	SC	SAMEA1032604	GCA_001118485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/485/GCA_001118485.2_6999_7_19	-	389109
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.17765	51.5	-	FEWY01	100	2528	2166	2/9/16	3/21/17	Scaffold	SC	SAMEA2674205	GCA_900044275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/275/GCA_900044275.1_14324_4_93	-	2842STDY5881338
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48659	66.3	-	CTDW01	77	6164	6011	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296557	GCA_001374955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/955/GCA_001374955.1_258_Rw99_contgs_500	-	-
Acinetobacter baumannii 1499986	1310673	PRJNA194749	194749	Proteobacteria	Gammaproteobacteria	4.11516	38.8	-	JMOA01	276	4128	3764	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692970	GCA_000682375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/375/GCA_000682375.1_ASM68237v1	-	1499986
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.06145	35.3	-	CQAB01	17	2128	2009	3/22/15	3/17/17	Scaffold	SC	SAMEA1031515	GCA_001102725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/725/GCA_001102725.1_6630_8_1	-	CZ-NI-004
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05331	41.2	-	CDSH01	54	2043	1946	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233754	GCA_000942575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/575/GCA_000942575.1_Velvet_assembly	-	0Z-C
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.60054	50.7	-	FTTV01	439	5044	4408	1/28/17	2/26/17	Scaffold	SC	SAMEA2054467	GCA_900157965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/965/GCA_900157965.1_9789_6_87	-	2090STDY5461801
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.34054	28.3	-	FUMU01	37	4103	3902	2/14/17	2/23/17	Scaffold	SC	SAMEA3375128	GCA_900164425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/425/GCA_900164425.1_16780_8_62	-	VRECD0176
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.36601	57.4	-	CCGP01	105	5489	5210	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602937	GCA_000821985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/821/985/GCA_000821985.1_39AVR	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.97368	64.1	-	FSEN01	11	4946	4803	12/14/16	3/21/17	Scaffold	SC	SAMEA2259635	GCA_900134215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/215/GCA_900134215.1_11861_7_90	-	830
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.07893	64.2	-	FSEO01	23	5076	4955	12/14/16	3/21/17	Scaffold	SC	SAMEA2259619	GCA_900134225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/225/GCA_900134225.1_11861_7_79	-	814
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.64192	56.9	-	CCGO01	67	5627	5319	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602938	GCA_000822005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/005/GCA_000822005.1_40AVR	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	3.98183	28.5	-	FUMT01	45	3705	3508	2/14/17	2/23/17	Scaffold	SC	SAMEA3375133	GCA_900164435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/435/GCA_900164435.1_16780_8_67	-	VRECD0078
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.72037	50.7	-	FTTW01	380	5338	4527	1/28/17	3/2/17	Scaffold	SC	SAMEA2054476	GCA_900157975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/975/GCA_900157975.1_9789_6_96	-	2090STDY5461818
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.0537	41.1	-	CDVI01	54	2044	1943	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233859	GCA_000942615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/615/GCA_000942615.1_Velvet_assembly	-	F51C
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.03661	35.4	-	CPZX01	15	2072	1970	3/23/15	3/17/17	Scaffold	SC	SAMEA1031432	GCA_001102825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/825/GCA_001102825.1_6630_6_3	-	BG-NI-005
Acinetobacter baumannii 1284800	1310627	PRJNA194703	194703	Proteobacteria	Gammaproteobacteria	4.48473	39	-	JMOB01	514	4648	4126	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692949	GCA_000682395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/395/GCA_000682395.1_ASM68239v1	-	1284800
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.49176	66.3	-	CTDU01	73	6173	6017	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296558	GCA_001374975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/975/GCA_001374975.1_259_Rw151_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.17439	51.5	-	FEXF01	96	2522	2184	2/9/16	3/19/17	Scaffold	SC	SAMEA2674386	GCA_900044285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/285/GCA_900044285.1_14324_5_49	-	2842STDY5881582
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07014	39.6	-	CNPS02	180	2233	2015	3/23/15	3/11/17	Contig	SC	SAMEA1032707	GCA_001118505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/505/GCA_001118505.2_6952_4_19	-	487827
Escherichia coli AB42602061-isolate1	1333591	PRJNA203080	203080	Proteobacteria	Gammaproteobacteria	5.03089	50.6	-	ATOB01	126	5157	4847	7/3/13	2/22/17	Scaffold	The Genome Institute	SAMN02436902	GCA_000418715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/715/GCA_000418715.1_E_coliAB42602061-isolate1-1.0	-	AB42602061-isolate1
Mycobacterium tuberculosis M1560	1448704	PRJNA235715	235715	Terrabacteria group	Actinobacteria	4.43093	65.6	-	JKMO01	82	4321	4114	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599050	GCA_000663425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/425/GCA_000663425.1_Myco_tube_M1560_V1	-	M1560
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.0835	37.8	-	MDOL01	47	3188	3100	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410796	GCA_001711355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/355/GCA_001711355.1_ASM171135v1	-	A38
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.63601	30.4	-	NFOC01	45	1731	1623	6/8/17	6/10/17	Contig	Swansea University	SAMN06888319	GCA_002178035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/035/GCA_002178035.1_ASM217803v1	28493321	isolate_S6
Salmonella enterica subsp. enterica serovar Agona str. 467481	1124908	PRJNA78415	78415	Proteobacteria	Gammaproteobacteria	4.75941	52	-	AYCW01	59	4815	4553	10/25/13	2/26/17	Contig	FDA	SAMN02415159	GCA_000484395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/395/GCA_000484395.1_ASM48439v1	-	467481
Staphylococcus aureus WAMC6030	1409633	PRJNA223955	223955	Terrabacteria group	Firmicutes	2.95677	33	-	JBIQ01	22	3121	2948	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381694	GCA_000541655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/655/GCA_000541655.1_Stap_aure_WAMC6030_V1	-	WAMC6030
Staphylococcus aureus KINW6033	1409635	PRJNA223957	223957	Terrabacteria group	Firmicutes	2.96125	32.8	-	JBIP01	34	3116	2944	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381696	GCA_000541675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/675/GCA_000541675.1_Stap_aure_KINW6033_V1	-	KINW6033
Salmonella enterica subsp. enterica serovar Agona str. 620239	1124910	PRJNA78419	78419	Proteobacteria	Gammaproteobacteria	4.91021	52	-	AYCU01	65	5024	4758	10/25/13	2/26/17	Contig	FDA	SAMN02415157	GCA_000484415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/415/GCA_000484415.1_ASM48441v1	-	620239
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.63981	30.5	-	NFOD01	46	1724	1624	6/8/17	6/10/17	Contig	Swansea University	SAMN06888318	GCA_002178055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/055/GCA_002178055.1_ASM217805v1	28493321	isolate_S5
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.9715	37.8	-	MDPM01	24	2999	2918	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410581	GCA_001711385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/385/GCA_001711385.1_ASM171138v1	-	Lm41
Mycobacterium tuberculosis M1570	1448705	PRJNA235716	235716	Terrabacteria group	Actinobacteria	4.43898	65.6	-	JKMN01	67	4334	4126	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599051	GCA_000663445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/445/GCA_000663445.1_Myco_tube_M1570_V1	-	M1570
Escherichia coli AB42554418-isolate1	1333590	PRJNA203078	203078	Proteobacteria	Gammaproteobacteria	5.01679	50.6	-	ATOC01	166	5135	4825	7/3/13	2/25/17	Scaffold	The Genome Institute	SAMN02436903	GCA_000418735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/735/GCA_000418735.2_E_coliAB42554418-isolate1-1.0	-	AB42554418-isolate1
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.03175	39.7	-	CLRD01	39	2239	2014	3/21/15	3/11/17	Contig	SC	SAMEA1028828	GCA_001118525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/525/GCA_001118525.1_6972_2_19	-	SMRU2563
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15539	51.6	-	FFCG01	97	2496	2142	2/9/16	3/19/17	Scaffold	SC	SAMEA2674142	GCA_900044295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/295/GCA_900044295.1_14555_6_8	-	2842STDY5881445
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48819	66.3	-	CTDV01	72	6162	6008	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296559	GCA_001374995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/374/995/GCA_001374995.1_260_Rw199_contigs_500	-	-
Acinetobacter baumannii 1598530	1310700	PRJNA194776	194776	Proteobacteria	Gammaproteobacteria	3.88232	39	-	JMOE01	41	3741	3571	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692973	GCA_000682415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/415/GCA_000682415.1_ASM68241v1	-	1598530
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.05717	35.2	-	CQDP01	28	2162	2032	3/22/15	3/17/17	Scaffold	SC	SAMEA1031503	GCA_001103585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/585/GCA_001103585.1_6630_5_23	-	BG-NI-001
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05718	41.1	-	CDTM01	60	2047	1949	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233792	GCA_000942675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/675/GCA_000942675.1_Velvet_assembly	-	B41Q
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.79452	50.5	-	FTUE01	509	5257	4554	1/28/17	2/26/17	Scaffold	SC	SAMEA2054475	GCA_900157985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/985/GCA_900157985.1_9789_6_95	-	2090STDY5461817
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.22277	28.7	-	FUMO01	39	3971	3782	2/14/17	2/23/17	Scaffold	SC	SAMEA3375124	GCA_900164445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/445/GCA_900164445.1_16780_8_58	-	VRECD0170
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.42263	57.4	-	CCGQ01	57	5517	5221	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602939	GCA_000822025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/025/GCA_000822025.1_41AVR	-	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18657	64.1	-	FVIY01	27	5327	5097	3/10/17	3/18/17	Scaffold	SC	SAMEA2259678	GCA_900134235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/235/GCA_900134235.1_11861_8_20	-	873
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.97271	64.1	-	FVJC01	15	4949	4796	3/10/17	3/18/17	Scaffold	SC	SAMEA2259636	GCA_900134245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/245/GCA_900134245.1_11861_7_91	-	831
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.73963	57.1	-	CCGR01	112	5938	5651	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602940	GCA_000822045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/045/GCA_000822045.1_42AVR	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.058	28.8	-	FUMP01	30	3782	3612	2/14/17	2/23/17	Scaffold	SC	SAMEA3375123	GCA_900164455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/455/GCA_900164455.1_16780_8_57	-	VRECD0169
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.61709	50.8	-	FTTZ01	364	5161	4402	1/28/17	2/26/17	Scaffold	SC	SAMEA2054474	GCA_900157995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/995/GCA_900157995.1_9789_6_94	-	2090STDY5461816
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05548	41.2	-	CDUQ01	75	2035	1929	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233836	GCA_000942715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/715/GCA_000942715.1_Velvet_assembly	-	E62H
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.00996	35.4	-	CPVW01	34	2026	1915	3/23/15	3/17/17	Scaffold	SC	SAMEA1031423	GCA_001103625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/625/GCA_001103625.1_6630_7_19	-	IT-NI-034
Acinetobacter baumannii 233846	1310736	PRJNA194812	194812	Proteobacteria	Gammaproteobacteria	4.50561	38.9	-	JMOG01	69	4403	4119	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692955	GCA_000682435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/435/GCA_000682435.1_ASM68243v1	-	233846
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.4804	66.3	-	CTES01	76	6153	6000	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296560	GCA_001375015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/015/GCA_001375015.1_261_Tsb_5_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.24921	51.4	-	FEPP01	84	2631	2229	2/9/16	3/21/17	Scaffold	SC	SAMEA2674366	GCA_900044705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/705/GCA_900044705.1_14324_5_29	-	2842STDY5881562
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10272	39.7	-	CLOG01	67	2309	2099	3/21/15	3/11/17	Contig	SC	SAMEA1028864	GCA_001118605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/605/GCA_001118605.1_6949_1_2	-	SMRU2402
Escherichia coli AB42410445-isolate1	1333589	PRJNA203077	203077	Proteobacteria	Gammaproteobacteria	5.02229	50.6	-	ATOD01	152	5141	4827	7/3/13	2/25/17	Scaffold	The Genome Institute	SAMN02436760	GCA_000418755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/755/GCA_000418755.2_E_coliAB42410445-isolate1-1.0	-	AB42410445-isolate1
Mycobacterium tuberculosis M1615	1448706	PRJNA235717	235717	Terrabacteria group	Actinobacteria	4.39125	65.6	-	JKMM01	82	4332	4111	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599052	GCA_000663465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/465/GCA_000663465.1_Myco_tube_M1615_V1	-	M1615
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.99966	37.8	-	MDOP01	23	3078	2994	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410755	GCA_001711395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/395/GCA_001711395.1_ASM171139v1	-	A30
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.75664	30.2	-	NFOH01	100	1833	1709	6/8/17	6/10/17	Contig	Swansea University	SAMN06888314	GCA_002178075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/075/GCA_002178075.1_ASM217807v1	28493321	isolate_S1
Salmonella enterica subsp. enterica serovar Senftenberg str. NC_MB012510-0038	749962	PRJNA46897	46897	Proteobacteria	Gammaproteobacteria	4.71783	52.1	-	AYEJ01	77	4744	4498	10/25/13	2/26/17	Contig	FDA	SAMN02415198	GCA_000484435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/435/GCA_000484435.1_ASM48443v1	-	NC_MB012510-0038
Staphylococcus aureus UCIM6081	1409636	PRJNA223958	223958	Terrabacteria group	Firmicutes	2.94412	32.8	-	JBIO01	44	3086	2911	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381697	GCA_000541695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/695/GCA_000541695.1_Stap_aure_UCIM6081_V1	-	UCIM6081
Staphylococcus aureus LAMC6078	1409637	PRJNA223959	223959	Terrabacteria group	Firmicutes	2.79623	32.8	-	JBIN01	19	2870	2734	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381698	GCA_000541715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/715/GCA_000541715.1_Stap_aure_LAMC6078_V1	-	LAMC6078
Salmonella enterica subsp. enterica serovar Heidelberg str. 82-2052	1124934	PRJNA78473	78473	Proteobacteria	Gammaproteobacteria	4.95234	52	-	AMMX01	89	5126	4807	10/28/13	2/26/17	Contig	FDA	SAMN01088004	GCA_000486065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/065/GCA_000486065.1_ASM48606v1	24158624	82-2052
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.64171	30.4	-	NFOF01	57	1715	1621	6/8/17	6/10/17	Contig	Swansea University	SAMN06888316	GCA_002178085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/085/GCA_002178085.1_ASM217808v1	28493321	isolate_S3
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.91235	37.9	-	MDOZ01	26	2942	2870	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410693	GCA_001711425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/425/GCA_001711425.1_ASM171142v1	-	OCF45
Mycobacterium tuberculosis M1638	1448707	PRJNA235718	235718	Terrabacteria group	Actinobacteria	4.41463	65.6	-	JKML01	86	4331	4104	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599053	GCA_000663485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/485/GCA_000663485.1_Myco_tube_M1638_V1	-	M1638
Escherichia coli 112469218-isolate1	1333588	PRJNA203076	203076	Proteobacteria	Gammaproteobacteria	5.11784	50.6	-	ATOE01	265	5339	5031	7/3/13	2/22/17	Scaffold	The Genome Institute	SAMN02436892	GCA_000418775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/775/GCA_000418775.1_E_coli112469218-isolate1-1.0	-	112469218-isolate1
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.13906	39.5	-	CLYR01	81	2356	2136	3/21/15	3/10/17	Contig	SC	SAMEA1029144	GCA_001118645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/645/GCA_001118645.1_6983_7_65	-	SMRU2369
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15596	51.6	-	FEVK01	81	2499	2133	2/9/16	3/21/17	Scaffold	SC	SAMEA2674068	GCA_900044715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/715/GCA_900044715.1_14324_4_16	-	2842STDY5881261
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.47781	66.3	-	CUXP01	75	6153	5996	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296561	GCA_001375035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/035/GCA_001375035.1_262_2_5Pc_4_contigs_500	-	-
Acinetobacter baumannii 1042969-1197	1310831	PRJNA194907	194907	Proteobacteria	Gammaproteobacteria	4.25271	39.3	-	JMOH01	156	4236	3950	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692954	GCA_000682455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/455/GCA_000682455.1_ASM68245v1	-	1042969-1197
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.06915	35.3	-	CPVV01	16	2126	2014	3/23/15	3/17/17	Scaffold	SC	SAMEA1031520	GCA_001104145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/145/GCA_001104145.1_6630_6_23	-	DE-NI-022
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.0338	41.1	-	CDUO01	61	2014	1914	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233775	GCA_000942735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/735/GCA_000942735.1_Velvet_assembly	-	B28Y
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.6777	50.7	-	FTTX01	361	5224	4463	1/28/17	2/26/17	Scaffold	SC	SAMEA2054473	GCA_900158005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/005/GCA_900158005.1_9789_6_93	-	2090STDY5461815
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.19062	28.7	-	FULO01	33	3920	3730	2/14/17	2/23/17	Scaffold	SC	SAMEA3375126	GCA_900164465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/465/GCA_900164465.1_16780_8_60	-	VRECD0173
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.71514	57.1	-	CCGS01	135	5928	5618	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602941	GCA_000822065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/065/GCA_000822065.1_43AVR	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.93402	64.1	-	FSEP01	16	4932	4766	12/14/16	3/21/17	Scaffold	SC	SAMEA2259624	GCA_900134255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/255/GCA_900134255.1_11861_8_11	-	819
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.52272	64	-	FSEQ01	42	5690	5440	12/14/16	3/21/17	Scaffold	SC	SAMEA2259681	GCA_900134265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/265/GCA_900134265.1_11861_8_21	-	876
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.72137	57.1	-	CCGY01	183	5947	5608	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602942	GCA_000822085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/085/GCA_000822085.1_44AVR	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.1915	28.8	-	FUML01	40	3861	3719	2/14/17	2/23/17	Scaffold	SC	SAMEA3375090	GCA_900164475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/475/GCA_900164475.1_16780_8_24	-	VRECD0134
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.61758	50.8	-	FTTY01	352	5142	4405	1/28/17	2/26/17	Scaffold	SC	SAMEA2054472	GCA_900158015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/015/GCA_900158015.1_9789_6_92	-	2090STDY5461814
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.19563	41	-	CDSP01	320	2141	2010	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233763	GCA_000942755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/755/GCA_000942755.1_Velvet_assembly	-	B21S
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.0934	35.3	-	CPZS01	28	2140	2015	3/22/15	3/17/17	Scaffold	SC	SAMEA1031424	GCA_001106525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/525/GCA_001106525.1_6630_7_10	-	IT-NI-009
Acinetobacter baumannii 1262761-105	1310827	PRJNA194903	194903	Proteobacteria	Gammaproteobacteria	4.13957	39.1	-	JMOJ01	65	4107	3823	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692958	GCA_000682475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/475/GCA_000682475.1_ASM68247v1	-	1262761-105
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48201	66.3	-	CTET01	72	6160	6005	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296562	GCA_001375055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/055/GCA_001375055.1_263_10Pc_3_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.13104	51.8	-	FFEF01	70	2481	2149	2/9/16	3/19/17	Scaffold	SC	SAMEA2674336	GCA_900044725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/725/GCA_900044725.1_14555_6_94	-	2842STDY5881531
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.98632	39.7	-	CQRA01	51	2193	1987	3/23/15	3/11/17	Contig	SC	SAMEA970206	GCA_001118685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/685/GCA_001118685.1_5159_7_10	-	BHN638
Escherichia coli 112469215-isolate1	1333587	PRJNA203075	203075	Proteobacteria	Gammaproteobacteria	5.11021	50.6	-	ATOF01	351	5351	4949	7/3/13	2/22/17	Scaffold	The Genome Institute	SAMN02436714	GCA_000418795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/795/GCA_000418795.1_E_coli112469215-isolate1-1.0	-	112469215-isolate1
Mycobacterium tuberculosis M1702	1448708	PRJNA235719	235719	Terrabacteria group	Actinobacteria	4.41156	65.6	-	JKMK01	82	4338	4105	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599054	GCA_000663505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/505/GCA_000663505.1_Myco_tube_M1702_V1	-	M1702
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.97354	37.9	-	MDOJ01	21	3009	2928	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410838	GCA_001711435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/435/GCA_001711435.1_ASM171143v1	-	A40
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.63239	30.4	-	NFOJ01	83	1691	1590	6/8/17	6/10/17	Contig	Swansea University	SAMN06888312	GCA_002178105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/105/GCA_002178105.1_ASM217810v1	28493321	isolate_H8
Salmonella enterica subsp. enterica serovar Heidelberg str. 24390	1124935	PRJNA78475	78475	Proteobacteria	Gammaproteobacteria	4.86217	52.2	-	AMMY01	63	4987	4729	10/28/13	2/26/17	Contig	FDA	SAMN02415147	GCA_000486085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/085/GCA_000486085.1_ASM48608v1	24732280	24390
Staphylococcus aureus AMMC6119	1409638	PRJNA223960	223960	Terrabacteria group	Firmicutes	2.88088	32.8	-	JBIM01	36	3032	2882	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381699	GCA_000541735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/735/GCA_000541735.1_Stap_aure_AMMC6119_V1	-	AMMC6119
Staphylococcus aureus OCMM6085	1409640	PRJNA223962	223962	Terrabacteria group	Firmicutes	2.87901	32.8	-	JBIL01	44	3012	2855	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381701	GCA_000541755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/755/GCA_000541755.1_Stap_aure_OCMM6085_V1	-	OCMM6085
Salmonella enterica subsp. enterica serovar Typhimurium str. AZ 057	1037262	PRJNA67437	67437	Proteobacteria	Gammaproteobacteria	4.91791	52.2	-	AOXC01	87	5049	4796	10/28/13	2/26/17	Contig	FDA	SAMN01823743	GCA_000486105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/105/GCA_000486105.1_ASM48610v1	24158624	AZ 057
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.6765	30.4	-	NFOO01	240	1859	1637	6/8/17	6/10/17	Contig	Swansea University	SAMN06888307	GCA_002178155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/155/GCA_002178155.1_ASM217815v1	28493321	isolate_H34
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.05327	37.9	-	MDOK01	19	3129	3046	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410820	GCA_001711465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/465/GCA_001711465.1_ASM171146v1	-	A4
Mycobacterium tuberculosis M1703	1448709	PRJNA235720	235720	Terrabacteria group	Actinobacteria	4.43531	65.6	-	JKMJ01	78	4356	4121	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599055	GCA_000663525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/525/GCA_000663525.1_Myco_tube_M1703_V1	-	M1703
Escherichia coli HVH 1 (4-6876161)	1280956	PRJNA186038	186038	Proteobacteria	Gammaproteobacteria	5.33225	50.5	-	AVSX01	10	5493	5157	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885668	GCA_000456005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/005/GCA_000456005.1_Esch_coli_HVH_1_4-6876161_V1	-	HVH 1 (4-6876161)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.1158	39.6	-	CNXC02	195	2266	2043	3/22/15	3/5/17	Contig	SC	SAMEA1032439	GCA_001118725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/725/GCA_001118725.2_7001_3_11	-	R34-3146
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16209	51.5	-	FFAT01	84	2509	2146	2/9/16	3/21/17	Scaffold	SC	SAMEA2674267	GCA_900046735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/735/GCA_900046735.1_14555_5_63	-	2842STDY5881404
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48769	66.3	-	CUXQ01	76	6168	6011	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296563	GCA_001375075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/075/GCA_001375075.1_264_12_5Pc_1_2_contigs_500	-	-
Acinetobacter baumannii 1276470-132	1310829	PRJNA194905	194905	Proteobacteria	Gammaproteobacteria	4.11594	39	-	JMOK01	120	4106	3855	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692975	GCA_000682495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/495/GCA_000682495.1_ASM68249v1	-	1276470-132
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.05129	35.2	-	CQDD01	17	2114	1959	3/23/15	4/10/17	Scaffold	SC	SAMEA1031452	GCA_001108625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/625/GCA_001108625.1_6630_7_16	-	IT-NI-0031
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04848	41.2	-	CDWH01	59	2045	1948	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233815	GCA_000942895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/895/GCA_000942895.1_Velvet_assembly	-	E08L
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.61266	50.9	-	FTUD01	369	5202	4417	1/28/17	2/26/17	Scaffold	SC	SAMEA2054470	GCA_900158025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/025/GCA_900158025.1_9789_6_90	-	2090STDY5461812
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.22792	28.7	-	FUMX01	38	3990	3787	2/14/17	2/23/17	Scaffold	SC	SAMEA3375125	GCA_900164485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/485/GCA_900164485.1_16780_8_59	-	VRECD0172
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.22018	57.5	-	CCGT01	36	5198	4953	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602943	GCA_000822105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/105/GCA_000822105.1_45AVR	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.52191	64	-	FVJG01	50	5685	5450	3/10/17	3/18/17	Scaffold	SC	SAMEA2259682	GCA_900134305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/305/GCA_900134305.1_11861_8_22	-	877
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.92011	64.1	-	FVJJ01	15	4901	4739	3/10/17	3/18/17	Scaffold	SC	SAMEA2259675	GCA_900134315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/315/GCA_900134315.1_11893_6_34	-	870
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.39727	57.4	-	CCGV01	101	5522	5238	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602944	GCA_000822125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/125/GCA_000822125.1_46AVR	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.16859	29.1	-	FUMG01	33	3935	3737	2/14/17	2/23/17	Scaffold	SC	SAMEA3375120	GCA_900164495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/495/GCA_900164495.1_16780_8_54	-	VRECD0166
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.83104	50.7	-	FTUB01	383	5408	4647	1/28/17	2/26/17	Scaffold	SC	SAMEA2054471	GCA_900158045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/045/GCA_900158045.1_9789_6_91	-	2090STDY5461813
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.08384	41.2	-	CDXO01	54	2089	1994	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234047	GCA_000942975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/975/GCA_000942975.1_Velvet_assembly	-	S2Y
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.04936	35.3	-	CPVS01	29	2086	1960	3/22/15	3/17/17	Scaffold	SC	SAMEA1031525	GCA_001108745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/745/GCA_001108745.1_6630_5_21	-	DK-NI-021
Acinetobacter baumannii 1571545	1310816	PRJNA194892	194892	Proteobacteria	Gammaproteobacteria	4.46056	39	-	JMOM01	107	4485	4134	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692959	GCA_000682515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/515/GCA_000682515.1_ASM68251v1	-	1571545
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48713	66.3	-	CUXR01	79	6162	6008	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296564	GCA_001375095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/095/GCA_001375095.1_265_12_5Pc_8_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.15099	51.6	-	FEYN01	87	2488	2157	2/9/16	3/19/17	Scaffold	SC	SAMEA2674109	GCA_900047055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/055/GCA_900047055.1_14555_5_4	-	2842STDY5881345
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04714	39.6	-	COEW02	144	2207	2008	3/23/15	3/11/17	Contig	SC	SAMEA1463129	GCA_001118765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/765/GCA_001118765.2_7622_5_63	-	MD5104
Escherichia coli HVH 2 (4-6943160)	1280957	PRJNA186039	186039	Proteobacteria	Gammaproteobacteria	5.21218	50.5	-	AVSY01	19	5357	5029	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885669	GCA_000456025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/025/GCA_000456025.1_Esch_coli_HVH_2_4-6943160_V1	-	HVH 2 (4-6943160)
Mycobacterium tuberculosis M1704	1448710	PRJNA235721	235721	Terrabacteria group	Actinobacteria	4.40322	65.6	-	JKMI01	79	4329	4095	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599056	GCA_000663545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/545/GCA_000663545.1_Myco_tube_M1704_V1	-	M1704
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.99266	37.8	-	MDOI01	14	3060	2972	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410797	GCA_001711475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/475/GCA_001711475.1_ASM171147v1	-	A41
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.6958	30.5	-	NFOR01	178	1810	1702	6/8/17	6/10/17	Contig	Swansea University	SAMN06888304	GCA_002178175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/175/GCA_002178175.1_ASM217817v1	28493321	isolate_H31
"Salmonella enterica subsp. salamae serovar 58:l,z13,z28:z6 str. 00-0163"	1173951	PRJNA161827	161827	Proteobacteria	Gammaproteobacteria	5.08826	51.6	-	AOXE01	85	5147	4782	10/28/13	2/26/17	Contig	FDA	SAMN00990755	GCA_000486145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/145/GCA_000486145.1_ASM48614v1	24158624	00-0163
Staphylococcus aureus FVRH6052	1409641	PRJNA223963	223963	Terrabacteria group	Firmicutes	2.8995	32.7	-	JBIK01	8	3056	2890	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381702	GCA_000541775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/775/GCA_000541775.1_Stap_aure_FVRH6052_V1	-	FVRH6052
Staphylococcus aureus LAMC6084	1409642	PRJNA223964	223964	Terrabacteria group	Firmicutes	2.84891	32.8	-	JBIJ01	33	2988	2800	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381703	GCA_000541795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/795/GCA_000541795.1_Stap_aure_LAMC6084_V1	-	LAMC6084
Salmonella enterica subsp. enterica serovar Paratyphi B str. SARA62	702985	PRJNA42919	42919	Proteobacteria	Gammaproteobacteria	4.80837	52	-	AOXG01	52	4826	4573	10/28/13	2/26/17	Contig	FDA	SAMN01805320	GCA_000486185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/185/GCA_000486185.1_ASM48618v1	24158624	SARA62
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.69558	30.5	-	NFOS01	177	1810	1702	6/8/17	6/10/17	Contig	Swansea University	SAMN06888303	GCA_002178195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/195/GCA_002178195.1_ASM217819v1	28493321	isolate_H30
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.01231	37.9	-	MDOH01	22	3041	2955	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410824	GCA_001711505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/505/GCA_001711505.1_ASM171150v1	-	A45
Mycobacterium tuberculosis M1726	1448711	PRJNA235722	235722	Terrabacteria group	Actinobacteria	4.42728	65.6	-	JKMH01	72	4317	4102	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599057	GCA_000663565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/565/GCA_000663565.1_Myco_tube_M1726_V1	-	M1726
Escherichia coli HVH 3 (4-7276001)	1280958	PRJNA186040	186040	Proteobacteria	Gammaproteobacteria	5.4059	50.4	-	AVSZ01	18	5611	5205	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885670	GCA_000456045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/045/GCA_000456045.1_Esch_coli_HVH_3_4-7276001_V1	-	HVH 3 (4-7276001)
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.15575	39.5	-	CLIL01	54	2388	2149	3/21/15	3/10/17	Contig	SC	SAMEA1026072	GCA_001118845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/845/GCA_001118845.1_6925_6_4	-	SMRU2188
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.25876	51.7	-	FFDC01	106	2626	2244	2/9/16	3/21/17	Scaffold	SC	SAMEA2674213	GCA_900047065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/065/GCA_900047065.1_14555_6_30	-	2842STDY5881467
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.49132	66.3	-	CTEU01	75	6169	6016	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296565	GCA_001375115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/115/GCA_001375115.1_266_15Pc_7_contigs_500	-	-
Acinetobacter baumannii 24812_8	1310852	PRJNA194929	194929	Proteobacteria	Gammaproteobacteria	3.96209	39	-	JMON01	134	3917	3651	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692978	GCA_000682535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/535/GCA_000682535.1_ASM68253v1	-	24812_8
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.10061	35.3	-	CQCI01	20	2171	2069	3/23/15	3/17/17	Scaffold	SC	SAMEA1031488	GCA_001110405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/405/GCA_001110405.1_6630_6_12	-	DE-NI-001
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.08311	41.1	-	CDWV01	70	2067	1958	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233860	GCA_000943195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/195/GCA_000943195.1_Velvet_assembly	-	F53J
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.68868	50.7	-	FTUA01	378	5219	4463	1/28/17	2/26/17	Scaffold	SC	SAMEA2054469	GCA_900158065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/065/GCA_900158065.1_9789_6_89	-	2090STDY5461811
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.30886	28.7	-	FUMZ01	41	4030	3849	2/14/17	2/23/17	Scaffold	SC	SAMEA3375134	GCA_900164505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/505/GCA_900164505.1_16780_8_68	-	VRECD0082
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.43013	57.4	-	CCGU01	46	5403	5139	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602945	GCA_000822145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/145/GCA_000822145.1_47AVR	-	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.9207	64.1	-	FVJI01	18	4901	4740	3/10/17	3/18/17	Scaffold	SC	SAMEA2259676	GCA_900134325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/325/GCA_900134325.1_11893_6_35	-	871
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.22899	64	-	FVJA01	24	5275	5142	3/10/17	3/18/17	Scaffold	SC	SAMEA2275692	GCA_900134345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/345/GCA_900134345.1_12082_5_59	-	966
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.65321	57.2	-	CCGW01	121	5879	5582	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602946	GCA_000822165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/165/GCA_000822165.1_48AVR	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.07494	28.5	-	FUNA01	30	3773	3596	2/14/17	2/23/17	Scaffold	SC	SAMEA3375135	GCA_900164515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/515/GCA_900164515.1_16780_8_69	-	VRECD0085
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.58816	50.8	-	FTUG01	393	5113	4396	1/28/17	2/26/17	Scaffold	SC	SAMEA1967083	GCA_900158075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/075/GCA_900158075.1_9803_4_3	-	2090STDY5461821
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.07039	41.3	-	CDXX01	64	2076	1976	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234061	GCA_000943235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/235/GCA_000943235.1_Velvet_assembly	-	S6M
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.02927	35.3	-	CPVO01	28	2057	1948	3/23/15	3/17/17	Scaffold	SC	SAMEA1031482	GCA_001114925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/925/GCA_001114925.1_6630_5_3	-	BE-NI-007
Acinetobacter baumannii 24860_3	1310837	PRJNA194913	194913	Proteobacteria	Gammaproteobacteria	4.12344	39.3	-	JMOO01	104	4075	3812	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692979	GCA_000682555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/555/GCA_000682555.1_ASM68255v1	-	24860_3
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48629	66.3	-	CTEW01	82	6174	6013	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296566	GCA_001375135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/135/GCA_001375135.1_267_15_211Gb_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16582	51.5	-	FEPT01	84	2542	2169	2/9/16	3/21/17	Scaffold	SC	SAMEA2674388	GCA_900047985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/985/GCA_900047985.1_14324_5_51	-	2842STDY5881584
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00251	39.7	-	CNNL02	120	2151	1957	3/22/15	3/5/17	Contig	SC	SAMEA1032644	GCA_001119045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/045/GCA_001119045.2_6925_1_62	-	R34-3044
Escherichia coli HVH 4 (4-7276109)	1280959	PRJNA186041	186041	Proteobacteria	Gammaproteobacteria	5.37967	50.5	-	AVTA01	15	5535	5143	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885671	GCA_000456065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/065/GCA_000456065.1_Esch_coli_HVH_4_4-7276109_V1	-	HVH 4 (4-7276109)
Mycobacterium tuberculosis M1728	1448712	PRJNA235723	235723	Terrabacteria group	Actinobacteria	4.38224	65.6	-	JKMG01	86	4316	4100	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599058	GCA_000663585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/585/GCA_000663585.1_Myco_tube_M1728_V1	-	M1728
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.99975	37.9	-	MDOQ01	20	3067	2985	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410740	GCA_001711525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/525/GCA_001711525.1_ASM171152v1	-	A3
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.69677	30.4	-	NFOT01	72	1805	1718	6/8/17	6/10/17	Contig	Swansea University	SAMN06888302	GCA_002178225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/225/GCA_002178225.1_ASM217822v1	28493321	isolate_H3
"Salmonella enterica subsp. indica serovar 6,14,25:z10:1,(2),7 str. 1121"	1173950	PRJNA161825	161825	Proteobacteria	Gammaproteobacteria	4.58137	51.8	-	AOXI01	53	4605	4298	10/28/13	2/26/17	Contig	FDA	SAMN00990754	GCA_000486225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/225/GCA_000486225.1_ASM48622v1	24158624	1121
Staphylococcus aureus OCMM6090	1409643	PRJNA223965	223965	Terrabacteria group	Firmicutes	2.85505	32.9	-	JBII01	22	3006	2837	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381704	GCA_000541815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/815/GCA_000541815.1_Stap_aure_OCMM6090_V1	-	OCMM6090
Staphylococcus aureus MISS6057	1409644	PRJNA223966	223966	Terrabacteria group	Firmicutes	2.88259	32.7	-	JBIH01	10	3030	2868	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381705	GCA_000541835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/835/GCA_000541835.1_Stap_aure_MISS6057_V1	-	MISS6057
"Salmonella enterica subsp. houtenae serovar 50:g,z51:- str. 01-0133"	1173948	PRJNA161823	161823	Proteobacteria	Gammaproteobacteria	4.78141	51.6	-	AOXJ01	110	4809	4396	10/28/13	2/26/17	Contig	FDA	SAMN00990752	GCA_000486245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/245/GCA_000486245.1_ASM48624v1	24158624	01-0133
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.62065	30.5	-	NFOU01	120	1704	1604	6/8/17	6/10/17	Contig	Swansea University	SAMN06888301	GCA_002178235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/235/GCA_002178235.1_ASM217823v1	28493321	isolate_H29
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.98445	37.9	-	MDOR01	18	3035	2952	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410792	GCA_001711535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/535/GCA_001711535.1_ASM171153v1	-	A28
Mycobacterium tuberculosis M1734	1448713	PRJNA235724	235724	Terrabacteria group	Actinobacteria	4.42416	65.6	-	JKMF01	73	4322	4110	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599059	GCA_000663605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/605/GCA_000663605.1_Myco_tube_M1734_V1	-	M1734
Escherichia coli HVH 5 (4-7148410)	1280960	PRJNA186042	186042	Proteobacteria	Gammaproteobacteria	5.10343	50.6	-	AVTB01	6	5252	4919	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885672	GCA_000456085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/085/GCA_000456085.1_Esch_coli_HVH_5_4-7148410_V1	-	HVH 5 (4-7148410)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05513	39.5	-	COFG02	132	2219	2018	3/22/15	3/11/17	Contig	SC	SAMEA1463003	GCA_001119285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/285/GCA_001119285.2_7622_5_79	-	ND6034
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16395	51.6	-	FEQG01	66	2495	2176	2/9/16	3/19/17	Scaffold	SC	SAMEA2674513	GCA_900047995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/995/GCA_900047995.1_14355_7_47	-	2842STDY5881676
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48784	66.3	-	CTFB01	75	6168	6009	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296567	GCA_001375155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/155/GCA_001375155.1_268_15_311Ba_contigs_500	-	-
Acinetobacter baumannii 24860_5	1310839	PRJNA194915	194915	Proteobacteria	Gammaproteobacteria	4.12831	39.3	-	JMOP01	92	4082	3835	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692980	GCA_000682575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/575/GCA_000682575.1_ASM68257v1	-	24860_5
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.08557	35.4	-	CPVG01	16	2142	2019	3/22/15	3/17/17	Scaffold	SC	SAMEA1031493	GCA_001115485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/485/GCA_001115485.1_6630_7_4	-	DE-NI-040
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04142	41.2	-	CEBM01	68	2027	1925	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234040	GCA_000943275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/275/GCA_000943275.1_Velvet_assembly	-	S2R
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.58529	50.8	-	FTUI01	349	5116	4348	1/28/17	2/26/17	Scaffold	SC	SAMEA2054480	GCA_900158105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/105/GCA_900158105.1_9803_4_6	-	2090STDY5461824
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.11402	28.5	-	FUNB01	47	3836	3641	2/14/17	2/23/17	Scaffold	SC	SAMEA3375142	GCA_900164525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/525/GCA_900164525.1_16780_8_76	-	VRECD0122
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.27712	57.5	-	CCGX01	58	5274	5035	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602947	GCA_000822185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/185/GCA_000822185.1_49BG	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.85367	64.3	-	FSEU01	22	4798	4654	12/14/16	3/21/17	Scaffold	SC	SAMEA2275698	GCA_900134355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/355/GCA_900134355.1_12082_5_60	-	972
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.064	64.1	-	FVJH01	11	5067	4968	3/10/17	3/18/17	Scaffold	SC	SAMEA2275815	GCA_900134365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/365/GCA_900134365.1_12082_5_72	-	1089
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.57075	57.2	-	CCHA01	77	5698	5422	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602948	GCA_000822205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/205/GCA_000822205.1_50BG	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.32588	28.6	-	FUNC01	38	4079	3912	2/14/17	2/23/17	Scaffold	SC	SAMEA3375145	GCA_900164535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/535/GCA_900164535.1_16780_8_79	-	VRECD0171
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.6105	50.8	-	FTUJ01	383	5151	4403	1/28/17	2/26/17	Scaffold	SC	SAMEA2054481	GCA_900158115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/115/GCA_900158115.1_9803_4_7	-	2090STDY5461825
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05784	41.1	-	CDXU01	59	2044	1946	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234058	GCA_000943335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/335/GCA_000943335.1_Velvet_assembly	-	S4J
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.11012	35.4	-	CQCW01	28	2133	2001	3/22/15	3/17/17	Scaffold	SC	SAMEA1031526	GCA_001116525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/525/GCA_001116525.1_6630_5_10	-	DK-NI-007
Acinetobacter baumannii 756476	1310815	PRJNA194891	194891	Proteobacteria	Gammaproteobacteria	4.11166	39.1	-	JMOR01	163	4114	3825	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692982	GCA_000682595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/595/GCA_000682595.1_ASM68259v1	-	756476
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48711	66.3	-	CUXT01	81	6168	6014	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296568	GCA_001375175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/175/GCA_001375175.1_269_Tsb_Bead_Pool_2_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.16236	51.6	-	FERK01	67	2513	2176	2/9/16	3/19/17	Scaffold	SC	SAMEA2673920	GCA_900048005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/005/GCA_900048005.1_14355_4_48	-	2842STDY5881005
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.14309	39.7	-	CNAN01	92	2283	2006	3/23/15	3/6/17	Contig	SC	SAMEA1022857	GCA_001119305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/305/GCA_001119305.1_6930_7_18	-	211
Escherichia coli HVH 6 (3-8296502)	1280961	PRJNA186043	186043	Proteobacteria	Gammaproteobacteria	5.42162	50.5	-	AVTC01	14	5516	5116	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885673	GCA_000456105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/105/GCA_000456105.1_Esch_coli_HVH_6_3-8296502_V1	-	HVH 6 (3-8296502)
Mycobacterium tuberculosis M1762	1448715	PRJNA235726	235726	Terrabacteria group	Actinobacteria	4.38499	65.5	-	JKMD01	82	4332	4091	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599061	GCA_000663625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/625/GCA_000663625.1_Myco_tube_M1762_V1	-	M1762
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.06392	37.8	-	MDOM01	77	3179	3059	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410764	GCA_001711565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/565/GCA_001711565.1_ASM171156v1	-	A37
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.63314	30.4	-	NFOV01	85	1700	1589	6/8/17	6/10/17	Contig	Swansea University	SAMN06888300	GCA_002178265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/265/GCA_002178265.1_ASM217826v1	28493321	isolate_H28
Salmonella enterica subsp. enterica serovar Worthington str. ATCC 9607	1173940	PRJNA161809	161809	Proteobacteria	Gammaproteobacteria	4.77692	52.2	-	AOXK01	346	5052	4588	10/28/13	2/26/17	Contig	FDA	SAMN01823739	GCA_000486265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/265/GCA_000486265.1_ASM48626v1	24158624	ATCC 9607
Staphylococcus aureus SMMC6121	1409645	PRJNA223967	223967	Terrabacteria group	Firmicutes	2.93092	32.9	-	JBIG01	20	3094	2924	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381706	GCA_000541855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/855/GCA_000541855.1_Stap_aure_SMMC6121_V1	-	SMMC6121
Staphylococcus aureus SCLE6029	1409646	PRJNA223968	223968	Terrabacteria group	Firmicutes	2.92541	32.8	-	JBIF01	7	3102	2927	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381707	GCA_000541875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/875/GCA_000541875.1_Stap_aure_SCLE6029_V1	-	SCLE6029
Salmonella enterica subsp. enterica serovar Urbana str. ATCC 9261	1173938	PRJNA161805	161805	Proteobacteria	Gammaproteobacteria	4.67075	52.3	-	AOXM01	279	4921	4485	10/28/13	2/26/17	Contig	FDA	SAMN01823737	GCA_000486305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/305/GCA_000486305.1_ASM48630v1	24158624	ATCC 9261
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.62426	30.5	-	NFOW01	72	1682	1591	6/8/17	6/10/17	Contig	Swansea University	SAMN06888299	GCA_002178285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/285/GCA_002178285.1_ASM217828v1	28493321	isolate_H27
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.00291	37.8	-	MDOO01	22	3069	2988	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410763	GCA_001711575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/575/GCA_001711575.1_ASM171157v1	-	A35
Mycobacterium tuberculosis M1780	1448716	PRJNA235727	235727	Terrabacteria group	Actinobacteria	4.41684	65.6	-	JKMC01	81	4326	4104	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599062	GCA_000663645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/645/GCA_000663645.1_Myco_tube_M1780_V1	-	M1780
Escherichia coli HVH 7 (4-7315031)	1280962	PRJNA186044	186044	Proteobacteria	Gammaproteobacteria	5.28155	50.5	-	AVTD01	23	5425	5040	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885674	GCA_000456125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/125/GCA_000456125.1_Esch_coli_HVH_7_4-7315031_V1	-	HVH 7 (4-7315031)
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.0463	39.5	-	CLSV01	77	2250	2027	3/21/15	3/4/17	Contig	SC	SAMEA1028979	GCA_001119325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/325/GCA_001119325.1_6972_4_15	-	SMRU2607
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.1873	51.4	-	FEUO01	92	2538	2170	2/9/16	3/21/17	Scaffold	SC	SAMEA2673915	GCA_900048015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/015/GCA_900048015.1_14355_6_56	-	2842STDY5881205
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48963	66.3	-	CUXS01	79	6172	6012	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296569	GCA_001375195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/195/GCA_001375195.1_270_Rw109_contigs_500	-	-
Acinetobacter baumannii 24812_7	1310851	PRJNA194928	194928	Proteobacteria	Gammaproteobacteria	4.13459	39.2	-	JMOU01	109	4127	3878	5/6/14	3/16/17	Contig	Institute for Genome Sciences	SAMN02692977	GCA_000682655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/655/GCA_000682655.1_ASM68265v1	-	24812_7
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.06691	35.3	-	CPXX01	21	2148	2031	3/22/15	3/17/17	Scaffold	SC	SAMEA1031461	GCA_001118625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/625/GCA_001118625.1_6630_5_4	-	BE-NI-008
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05909	41.1	-	CEBB01	58	2048	1956	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234106	GCA_000943835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/835/GCA_000943835.1_Velvet_assembly	-	V30R
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.57905	50.8	-	FTUO01	368	5107	4375	1/28/17	2/26/17	Scaffold	SC	SAMEA2054556	GCA_900158135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/135/GCA_900158135.1_9803_4_10	-	2090STDY5461828
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.2403	28.4	-	FUND01	34	3940	3780	2/14/17	2/23/17	Scaffold	SC	SAMEA3375146	GCA_900164545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/545/GCA_900164545.1_16780_8_80	-	VRECD0174
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.35726	57.4	-	CCGZ01	75	5319	5009	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602949	GCA_000822225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/225/GCA_000822225.1_51BG	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.22607	64.1	-	FSEV01	13	5276	5166	12/14/16	3/22/17	Scaffold	SC	SAMEA2275835	GCA_900134375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/375/GCA_900134375.1_12082_5_75	-	1109
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.62535	63.8	-	FSEW01	191	5667	5355	12/14/16	3/21/17	Scaffold	SC	SAMEA2275838	GCA_900134385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/385/GCA_900134385.1_12082_5_78	-	1112
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.49445	57.3	-	CCHC01	142	5594	5206	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602950	GCA_000822245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/245/GCA_000822245.1_52BG	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.10525	29	-	FUNE01	52	3857	3644	2/14/17	2/23/17	Scaffold	SC	SAMEA3374973	GCA_900164555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/555/GCA_900164555.1_16852_2_1	-	VRECD0003
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.52963	50.8	-	FTUM01	363	5027	4331	1/28/17	3/2/17	Scaffold	SC	SAMEA2054558	GCA_900158145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/145/GCA_900158145.1_9803_4_12	-	2090STDY5461830
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.09065	41.2	-	CDVN01	62	2101	1992	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233772	GCA_000943875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/875/GCA_000943875.1_Velvet_assembly	-	B27R
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.01075	35.4	-	CPXA01	12	2052	1940	3/22/15	3/17/17	Scaffold	SC	SAMEA1031449	GCA_001119085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/085/GCA_001119085.1_6630_5_6	-	DK-NI-002
Acinetobacter baumannii	470	PRJNA248899	248899	Proteobacteria	Gammaproteobacteria	3.94465	38.9	-	JNFY01	12	3814	3657	6/16/14	3/16/17	Contig	Bellarmine University	SAMN02803875	GCA_000708775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/775/GCA_000708775.1_ASM70877v1	25035329	BR097
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48929	66.3	-	CTFC01	78	6163	6015	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296570	GCA_001375215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/215/GCA_001375215.1_271_Rw168_2_contigs_500	-	-
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.13216	51.6	-	FEUX01	67	2462	2102	2/9/16	3/21/17	Scaffold	SC	SAMEA2673969	GCA_900048025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/025/GCA_900048025.1_14355_6_79	-	2842STDY5881228
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08284	39.5	-	CNUK02	130	2283	2070	3/22/15	3/11/17	Contig	SC	SAMEA1032658	GCA_001119345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/345/GCA_001119345.2_6999_5_4	-	153408
Escherichia coli HVH 9 (4-6942539)	1280963	PRJNA186045	186045	Proteobacteria	Gammaproteobacteria	4.89831	50.6	-	AVTE01	6	4987	4692	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885675	GCA_000456145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/145/GCA_000456145.1_Esch_coli_HVH_9_4-6942539_V1	-	HVH 9 (4-6942539)
Mycobacterium tuberculosis M1787	1448717	PRJNA235728	235728	Terrabacteria group	Actinobacteria	4.41085	65.6	-	JKMB01	78	4333	4098	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599063	GCA_000663665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/665/GCA_000663665.1_Myco_tube_M1787_V1	-	M1787
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.99648	37.8	-	MDNJ01	20	3049	2974	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410800	GCA_001711605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/605/GCA_001711605.1_ASM171160v1	-	A55
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.72497	30.4	-	NFOX01	82	1826	1719	6/8/17	6/10/17	Contig	Swansea University	SAMN06888298	GCA_002178295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/295/GCA_002178295.1_ASM217829v1	28493321	isolate_H26
Salmonella enterica subsp. enterica serovar Muenchen str. ATCC 8388	930770	PRJNA60513	60513	Proteobacteria	Gammaproteobacteria	4.6582	52.1	-	AOXN01	39	4700	4467	10/28/13	2/26/17	Contig	FDA	SAMN01823724	GCA_000486325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/325/GCA_000486325.1_ASM48632v1	24158624	ATCC 8388
Staphylococcus aureus WMCS6079	1409647	PRJNA223969	223969	Terrabacteria group	Firmicutes	2.90236	32.7	-	JBIE01	9	3064	2892	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381708	GCA_000541895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/895/GCA_000541895.1_Stap_aure_WMCS6079_V1	-	WMCS6079
Staphylococcus aureus TUSH6007	1409648	PRJNA223970	223970	Terrabacteria group	Firmicutes	2.94638	32.7	-	JBID01	12	3125	2955	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381709	GCA_000541915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/915/GCA_000541915.1_Stap_aure_TUSH6007_V1	-	TUSH6007
Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 8400	930773	PRJNA60519	60519	Proteobacteria	Gammaproteobacteria	4.77905	52.2	-	AOXU01	56	4823	4579	10/28/13	2/26/17	Contig	FDA	SAMN01823734	GCA_000486465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/465/GCA_000486465.1_ASM48646v1	24158624	ATCC 8400
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.74327	30.4	-	NFOY01	187	1873	1710	6/8/17	6/10/17	Contig	Swansea University	SAMN06888297	GCA_002178325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/325/GCA_002178325.1_ASM217832v1	28493321	isolate_H25
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.00721	37.8	-	MDNL01	22	3084	3005	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410782	GCA_001711625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/625/GCA_001711625.1_ASM171162v1	-	A544
Mycobacterium tuberculosis M1782	1448718	PRJNA235729	235729	Terrabacteria group	Actinobacteria	4.38738	65.6	-	JKMA01	77	4324	4107	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599064	GCA_000663685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/685/GCA_000663685.1_Myco_tube_M1782_V1	-	M1782
Escherichia coli HVH 10 (4-6832164)	1280964	PRJNA186046	186046	Proteobacteria	Gammaproteobacteria	5.24746	50.8	-	AVTF01	8	5444	5113	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885676	GCA_000456165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/165/GCA_000456165.1_Esch_coli_HVH_10_4-6832164_V1	-	HVH 10 (4-6832164)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12227	39.6	-	COBW02	214	2336	2100	3/22/15	3/11/17	Contig	SC	SAMEA1463002	GCA_001119365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/365/GCA_001119365.2_7622_3_53	-	CH2029
Neisseria meningitidis	487	PRJEB4909	240177	Proteobacteria	Betaproteobacteria	2.24002	51.6	-	FEWZ01	103	2607	2240	2/9/16	3/21/17	Scaffold	SC	SAMEA2674207	GCA_900048435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/435/GCA_900048435.1_14324_4_94	-	2842STDY5881339
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.49022	66.3	-	CTFD01	80	6169	6016	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296571	GCA_001375235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/235/GCA_001375235.1_272_Rw200_contigs_500	-	-
Acinetobacter baumannii	470	PRJNA248906	248906	Proteobacteria	Gammaproteobacteria	3.93352	38.9	-	JNFZ01	12	3800	3628	6/16/14	3/16/17	Contig	Bellarmine University	SAMN02803891	GCA_000708795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/795/GCA_000708795.1_ABU310	25035329	BU310
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.13482	35.5	-	CQDW01	21	2233	2108	3/23/15	3/17/17	Scaffold	SC	SAMEA1031513	GCA_001119265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/265/GCA_001119265.1_6630_6_14	-	DE-NI-004
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05923	41.1	-	CDVW01	58	2051	1957	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233808	GCA_000943895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/895/GCA_000943895.1_Velvet_assembly	-	E01D
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.60106	50.7	-	FTUN01	383	5052	4415	1/28/17	3/2/17	Scaffold	SC	SAMEA2054483	GCA_900158155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/155/GCA_900158155.1_9803_4_9	-	2090STDY5461827
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.33883	28.2	-	FUNF01	34	4073	3902	2/14/17	2/23/17	Scaffold	SC	SAMEA3375160	GCA_900164565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/565/GCA_900164565.1_16780_8_94	-	VRECD0179
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.48	57.3	-	CCHB01	56	5482	5204	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602951	GCA_000822265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/265/GCA_000822265.1_53BG	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.17321	63.9	-	FSEX01	69	5148	4988	12/14/16	3/21/17	Scaffold	SC	SAMEA2275674	GCA_900134395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/395/GCA_900134395.1_12163_1_28	-	952
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98458	64	-	FVJD01	15	5031	4888	3/10/17	3/18/17	Scaffold	SC	SAMEA2275675	GCA_900134405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/405/GCA_900134405.1_12163_1_29	-	953
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.71271	57.1	-	CCHD01	134	5915	5567	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602952	GCA_000822285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/285/GCA_000822285.1_54BG	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.12659	28.6	-	FUNH01	22	3862	3686	2/14/17	2/23/17	Scaffold	SC	SAMEA3374975	GCA_900164585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/585/GCA_900164585.1_16852_2_3	-	VRECD0012
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.70803	50.7	-	FTUP01	420	5297	4531	1/28/17	2/26/17	Scaffold	SC	SAMEA2054559	GCA_900158165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/165/GCA_900158165.1_9803_4_13	-	2090STDY5461831
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05776	41.2	-	CDTK01	54	2050	1941	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233793	GCA_000943915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/915/GCA_000943915.1_Velvet_assembly	-	B41U
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.03878	35.3	-	CPWS01	30	2081	1957	3/23/15	3/17/17	Scaffold	SC	SAMEA1031462	GCA_001123205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/205/GCA_001123205.1_6630_5_24	-	BG-NI-002
Acinetobacter baumannii LY2	1458919	PRJNA234343	234343	Proteobacteria	Gammaproteobacteria	3.75721	38.9	-	JDSW01	105	3572	3398	7/8/14	3/16/17	Contig	The Singapore Centre on Environmental Life Sciences Engineering	SAMN02583748	GCA_000722965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/965/GCA_000722965.1_Acinetobacter_baumannii_Genome_sequencing	24951812	LY2
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.76018	66.2	-	CTFE01	89	6485	6317	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296572	GCA_001375255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/255/GCA_001375255.1_273_Tsb_6_contigs_500	-	-
Neisseria meningitidis	487	PRJNA319252	319252	Proteobacteria	Betaproteobacteria	2.16817	51.7	chromosome:CP016883.1	-	1	2278	2023	8/11/16	8/11/16	Chromosome	Centers for Disease Control and Prevention	SAMN04883387	GCA_001703735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/703/735/GCA_001703735.1_ASM170373v1	-	M22790
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.08816	39.6	-	CKDH01	65	2289	2051	3/21/15	3/4/17	Contig	SC	SAMEA1023936	GCA_001119425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/425/GCA_001119425.1_6593_5_5	-	type strain: N
Escherichia coli HVH 13 (4-7634056)	1280966	PRJNA186048	186048	Proteobacteria	Gammaproteobacteria	5.18311	50.5	-	AVTH01	23	5322	4981	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885678	GCA_000456185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/185/GCA_000456185.1_Esch_coli_HVH_13_4-7634056_V1	-	HVH 13 (4-7634056)
Mycobacterium tuberculosis M1816	1448719	PRJNA235730	235730	Terrabacteria group	Actinobacteria	4.41928	65.6	-	JKLZ01	76	4340	4120	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599065	GCA_000663705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/705/GCA_000663705.1_Myco_tube_M1816_V1	-	M1816
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.12721	37.8	-	MDNB01	32	3190	3090	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410766	GCA_001711635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/635/GCA_001711635.1_ASM171163v1	-	A58
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.71693	30.2	-	NFOZ01	277	1869	1630	6/8/17	6/10/17	Contig	Swansea University	SAMN06888296	GCA_002178355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/355/GCA_002178355.1_ASM217835v1	28493321	isolate_H24
Salmonella enterica subsp. enterica serovar Stanley str. ATCC 7308	1124968	PRJNA78391	78391	Proteobacteria	Gammaproteobacteria	4.68782	52.2	-	AOXV01	184	4872	4405	10/28/13	2/26/17	Contig	FDA	SAMN01823735	GCA_000486485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/485/GCA_000486485.1_ASM48648v1	24158624	ATCC 7308
Staphylococcus aureus SCLE6032	1409649	PRJNA223971	223971	Terrabacteria group	Firmicutes	2.7935	32.8	-	JBIC01	18	2903	2736	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381710	GCA_000541935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/935/GCA_000541935.1_Stap_aure_SCLE6032_V1	-	SCLE6032
Staphylococcus aureus KINW6036	1409651	PRJNA223973	223973	Terrabacteria group	Firmicutes	2.90825	32.8	-	JBIA01	19	3053	2881	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381712	GCA_000541955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/955/GCA_000541955.1_Stap_aure_KINW6036_V1	-	KINW6036
Salmonella enterica subsp. enterica serovar Senftenberg str. 604314	1124966	PRJNA78457	78457	Proteobacteria	Gammaproteobacteria	4.72212	52.1	-	AOXW01	68	4777	4498	10/28/13	2/26/17	Contig	FDA	SAMN01813427	GCA_000486505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/505/GCA_000486505.1_ASM48650v1	24158624	604314
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.62187	30.4	-	NFPB01	125	1700	1579	6/8/17	6/10/17	Contig	Swansea University	SAMN06888294	GCA_002178365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/365/GCA_002178365.1_ASM217836v1	28493321	isolate_H22
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.05302	37.8	-	MDOB01	36	3154	3071	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05256774	GCA_001711645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/645/GCA_001711645.1_ASM171164v1	-	A507
Mycobacterium tuberculosis M1822	1448720	PRJNA235731	235731	Terrabacteria group	Actinobacteria	4.38655	65.6	-	JKLY01	81	4314	4108	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599066	GCA_000663725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/725/GCA_000663725.1_Myco_tube_M1822_V1	-	M1822
Escherichia coli HVH 16 (4-7649002)	1280967	PRJNA186049	186049	Proteobacteria	Gammaproteobacteria	5.18427	50.6	-	AVTI01	11	5306	4958	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885679	GCA_000456205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/205/GCA_000456205.1_Esch_coli_HVH_16_4-7649002_V1	-	HVH 16 (4-7649002)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.10414	39.6	-	CNOX02	178	2281	2043	3/22/15	3/11/17	Contig	SC	SAMEA1032497	GCA_001119465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/465/GCA_001119465.2_6930_8_22	-	R34-3028
Neisseria meningitidis	487	PRJNA244794	244794	Proteobacteria	Betaproteobacteria	2.1219	51.5	-	JMCN01	81	-	-	7/20/15	7/20/15	Scaffold	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention"	SAMN02729063	GCA_001183075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/075/GCA_001183075.1_Nm341215	25989189	341215
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.60348	66.2	-	CUXU01	87	6343	6174	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296573	GCA_001375275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/275/GCA_001375275.1_274_2_5Pc_5_contigs_500	-	-
Acinetobacter baumannii LY1	1458918	PRJNA234343	234343	Proteobacteria	Gammaproteobacteria	3.85158	38.9	-	JDSV01	271	3816	3512	7/8/14	3/16/17	Contig	The Singapore Centre on Environmental Life Sciences Engineering	SAMN02582433	GCA_000722975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/975/GCA_000722975.1_Acinetobacter_baumannii_Genome_sequencing	24951812	LY1
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.18198	35.4	-	CPYR01	15	2262	2140	3/22/15	3/17/17	Scaffold	SC	SAMEA1031514	GCA_001123605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/605/GCA_001123605.1_6630_5_20	-	DK-NI-019
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05921	41.1	-	CDVO01	66	2059	1944	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233786	GCA_000943935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/935/GCA_000943935.1_Velvet_assembly	-	B37H
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.65972	50.7	-	FTUQ01	423	5221	4489	1/28/17	2/26/17	Scaffold	SC	SAMEA2054560	GCA_900158175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/175/GCA_900158175.1_9803_4_14	-	2090STDY5461832
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.20347	28.6	-	FUNK01	35	4001	3829	2/14/17	2/23/17	Scaffold	SC	SAMEA3374976	GCA_900164595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/595/GCA_900164595.1_16852_2_4	-	VRECD0013
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.51007	57.4	-	CCHG01	255	5532	5218	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602953	GCA_000822305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/305/GCA_000822305.1_55BG	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.39664	64.1	-	FVJB01	31	5481	5296	3/10/17	3/18/17	Scaffold	SC	SAMEA2275678	GCA_900134435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/435/GCA_900134435.1_12163_1_32	-	956
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.86892	64.2	-	FVIZ01	7	4897	4764	3/10/17	3/18/17	Scaffold	SC	SAMEA2275680	GCA_900134445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/445/GCA_900134445.1_12163_1_34	-	958
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.62749	57.1	-	CCHE01	129	5794	5476	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602954	GCA_000822325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/325/GCA_000822325.1_56BG	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.07064	28.5	-	FUNI01	26	3745	3585	2/14/17	2/23/17	Scaffold	SC	SAMEA3374977	GCA_900164605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/605/GCA_900164605.1_16852_2_5	-	VRECD0014
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.72088	50.8	-	FTUR01	409	5307	4562	1/28/17	2/26/17	Scaffold	SC	SAMEA2054561	GCA_900158185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/185/GCA_900158185.1_9803_4_15	-	2090STDY5461833
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.0605	41.1	-	CECK01	59	2052	1956	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234109	GCA_000943975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/975/GCA_000943975.1_Velvet_assembly	-	V31J
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.08668	35.2	-	CQDC01	45	2139	2019	3/23/15	3/17/17	Scaffold	SC	SAMEA1031425	GCA_001123965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/965/GCA_001123965.1_6630_6_9	-	BG-NI-012
Acinetobacter baumannii LY3	1458920	PRJNA234343	234343	Proteobacteria	Gammaproteobacteria	3.8671	38.9	-	JDSX01	117	3752	3565	7/8/14	3/16/17	Contig	The Singapore Centre on Environmental Life Sciences Engineering	SAMN02583749	GCA_000722985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/985/GCA_000722985.1_Acinetobacter_baumannii_Genome_sequencing	24951812	LY3
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.47209	66.3	-	CTFG01	80	6162	6008	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296574	GCA_001375295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/295/GCA_001375295.1_275_10Pc_4_contigs_500	-	-
Neisseria meningitidis	487	PRJNA264444	264444	Proteobacteria	Betaproteobacteria	2.13259	51.7	-	JSAS01	261	2255	1272	1/15/15	1/15/15	Contig	University of Pittsburgh	SAMN03122548	GCA_000818495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/495/GCA_000818495.1_ASM81849v1	-	NM3684
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.01396	39.7	-	CPRN01	285	2252	1993	3/22/15	3/11/17	Contig	SC	SAMEA1019974	GCA_001119545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/545/GCA_001119545.1_6237_8_18	-	S-161
Escherichia coli HVH 17 (4-7473087)	1280968	PRJNA186050	186050	Proteobacteria	Gammaproteobacteria	5.27649	50.5	-	AVTJ01	18	5401	5083	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885680	GCA_000456225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/225/GCA_000456225.1_Esch_coli_HVH_17_4-7473087_V1	-	HVH 17 (4-7473087)
Mycobacterium tuberculosis M1848	1448721	PRJNA235732	235732	Terrabacteria group	Actinobacteria	4.39524	65.6	-	JKLX01	85	4327	4109	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599067	GCA_000663745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/745/GCA_000663745.1_Myco_tube_M1848_V1	-	M1848
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.05267	37.8	-	MDNZ01	39	3155	3070	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410826	GCA_001711685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/685/GCA_001711685.1_ASM171168v1	-	A509
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.65538	30.5	-	NFPD01	101	1748	1652	6/8/17	6/10/17	Contig	Swansea University	SAMN06888292	GCA_002178405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/405/GCA_002178405.1_ASM217840v1	28493321	isolate_H2
Salmonella enterica subsp. enterica serovar Saintpaul str. JO2008	1079469	PRJNA72635	72635	Proteobacteria	Gammaproteobacteria	4.6896	52.2	-	AOXY01	28	4711	4509	10/28/13	2/26/17	Contig	FDA	SAMN01823746	GCA_000486545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/545/GCA_000486545.1_ASM48654v1	24158624	JO2008
Staphylococcus aureus UCIM6101	1409652	PRJNA223974	223974	Terrabacteria group	Firmicutes	2.92854	32.8	-	JBHZ01	11	3071	2948	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381713	GCA_000541975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/975/GCA_000541975.1_Stap_aure_UCIM6101_V1	-	UCIM6101
Staphylococcus aureus FVRH6067	1409653	PRJNA223975	223975	Terrabacteria group	Firmicutes	2.90247	32.8	-	JBHY01	9	3053	2891	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381714	GCA_000541995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/541/995/GCA_000541995.1_Stap_aure_FVRH6067_V1	-	FVRH6067
Salmonella enterica subsp. enterica serovar Soerenga str. 695	1124967	PRJNA78407	78407	Proteobacteria	Gammaproteobacteria	4.73767	52.2	-	AOXZ01	204	4876	4506	10/28/13	2/26/17	Contig	FDA	SAMN01813423	GCA_000486565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/565/GCA_000486565.1_ASM48656v1	24158624	695
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.61002	30.4	-	NFPF01	31	1665	1564	6/8/17	6/10/17	Contig	Swansea University	SAMN06888290	GCA_002178435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/435/GCA_002178435.1_ASM217843v1	28493321	isolate_H18
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.051	37.8	-	MDOG01	27	3128	3049	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410799	GCA_001711695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/695/GCA_001711695.1_ASM171169v1	-	A46
Mycobacterium tuberculosis M1893	1448722	PRJNA235733	235733	Terrabacteria group	Actinobacteria	4.41686	65.6	-	JKLW01	101	4337	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599068	GCA_000663765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/765/GCA_000663765.1_Myco_tube_M1893_V1	-	M1893
Escherichia coli HVH 18 (4-8589585)	1280969	PRJNA186051	186051	Proteobacteria	Gammaproteobacteria	5.05465	50.7	-	AVTK01	29	5192	4798	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885681	GCA_000456245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/245/GCA_000456245.1_Esch_coli_HVH_18_4-8589585_V1	-	HVH 18 (4-8589585)
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.08897	39.7	-	CMBP01	64	2310	2096	3/21/15	3/11/17	Contig	SC	SAMEA1029445	GCA_001119585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/585/GCA_001119585.1_7004_7_51	-	SMRU2883
Neisseria meningitidis	487	PRJNA264539	264539	Proteobacteria	Betaproteobacteria	2.12213	51.7	-	JSAT01	280	2226	1277	1/15/15	1/15/15	Contig	University of Pittsburgh	SAMN03135245	GCA_000818505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/505/GCA_000818505.1_ASM81850v1	-	NM3685
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.32078	66.4	-	CTFF01	71	6006	5850	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296575	GCA_001375315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/315/GCA_001375315.1_276_12_5Pc_2_1_contigs_500	-	-
Acinetobacter baumannii LY6	1458923	PRJNA234343	234343	Proteobacteria	Gammaproteobacteria	4.04354	38.9	-	JDTA01	731	4288	3724	7/8/14	3/16/17	Contig	The Singapore Centre on Environmental Life Sciences Engineering	SAMN02583752	GCA_000723045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/045/GCA_000723045.1_Acinetobacter_baumannii_Genome_sequencing	24951812	LY6
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.09877	35.4	-	CQBY01	77	2185	2045	3/23/15	3/17/17	Scaffold	SC	SAMEA1031465	GCA_001124925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/925/GCA_001124925.1_6630_6_17	-	DE-NI-010
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03837	41.2	-	CDSX01	53	2021	1923	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233777	GCA_000943995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/995/GCA_000943995.1_Velvet_assembly	-	B31C
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.81902	50.5	-	FTUS01	442	5411	4618	1/28/17	2/26/17	Scaffold	SC	SAMEA2054562	GCA_900158195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/195/GCA_900158195.1_9803_4_16	-	2090STDY5461834
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.24128	28.6	-	FUNJ01	31	3980	3807	2/14/17	2/23/17	Scaffold	SC	SAMEA3374978	GCA_900164615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/615/GCA_900164615.1_16852_2_6	-	VRECD0016
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.68184	57.2	-	CCHI01	308	5940	5539	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602956	GCA_000822365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/365/GCA_000822365.1_58BG	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.26721	64	-	FWCP01	16	5310	5173	3/16/17	3/24/17	Scaffold	SC	SAMEA2275677	GCA_900134455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/455/GCA_900134455.1_12163_1_30	-	955
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.00372	64.2	-	FVAC01	24	5008	4861	3/9/17	3/18/17	Scaffold	SC	SAMEA2275687	GCA_900134465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/465/GCA_900134465.1_12163_1_37	-	961
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.62702	57.2	-	CCHH01	196	5768	5440	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602957	GCA_000822385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/385/GCA_000822385.1_60BG	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.03621	28.4	-	FUNL01	25	3763	3610	2/14/17	2/23/17	Scaffold	SC	SAMEA3374982	GCA_900164625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/625/GCA_900164625.1_16852_2_10	-	VRECD0004
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.63965	50.5	-	FTUV01	416	5092	4395	1/28/17	3/2/17	Scaffold	SC	SAMEA2054563	GCA_900158205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/205/GCA_900158205.1_9803_4_17	-	2090STDY5461835
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.07055	41.2	-	CDUI01	55	2069	1972	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233827	GCA_000944035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/035/GCA_000944035.1_Velvet_assembly	-	E30Z
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.05674	35.3	-	CQDA01	16	2121	2012	3/23/15	3/17/17	Scaffold	SC	SAMEA1031535	GCA_001127665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/665/GCA_001127665.1_6630_8_6	-	CZ-NI-009
Acinetobacter baumannii LY7	1458924	PRJNA234343	234343	Proteobacteria	Gammaproteobacteria	4.04588	38.9	-	JDTB01	544	4218	3739	7/8/14	3/16/17	Contig	The Singapore Centre on Environmental Life Sciences Engineering	SAMN02583753	GCA_000723055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/055/GCA_000723055.1_Acinetobacter_baumannii_Genome_sequencing	24951812	LY7
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.71929	66.3	-	CTFH01	84	6442	6262	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3296576	GCA_001375335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/335/GCA_001375335.1_277_12_5Pc_9_contigs_500	-	-
Neisseria meningitidis	487	PRJNA264442	264442	Proteobacteria	Betaproteobacteria	2.10102	51.7	-	JSAR01	250	2187	1226	1/15/15	1/15/15	Contig	University of Pittsburgh	SAMN03122547	GCA_000818515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/515/GCA_000818515.1_ASM81851v1	-	NM3680
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08972	39.6	-	CRRS01	36	2302	2060	3/23/15	3/11/17	Contig	SC	SAMEA1024652	GCA_001119605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/605/GCA_001119605.1_6805_1_6	-	SMRU1014
Escherichia coli HVH 19 (4-7154984)	1280970	PRJNA186052	186052	Proteobacteria	Gammaproteobacteria	5.60726	50.5	-	AVTL01	23	5692	5312	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885682	GCA_000456265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/265/GCA_000456265.1_Esch_coli_HVH_19_4-7154984_V1	-	HVH 19 (4-7154984)
Mycobacterium tuberculosis M1895	1448723	PRJNA235734	235734	Terrabacteria group	Actinobacteria	4.38976	65.6	-	JKLV01	80	4322	4108	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599069	GCA_000663785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/785/GCA_000663785.1_Myco_tube_M1895_V1	-	M1895
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.02749	37.8	-	MDOE01	25	3097	3016	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410806	GCA_001711725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/725/GCA_001711725.1_ASM171172v1	-	A500
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.69304	30.4	-	NFPG01	76	1816	1704	6/8/17	6/10/17	Contig	Swansea University	SAMN06888289	GCA_002178445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/445/GCA_002178445.1_ASM217844v1	28493321	isolate_H17
Salmonella enterica subsp. enterica serovar Paratyphi B str. ATCC 51962	930776	PRJNA60525	60525	Proteobacteria	Gammaproteobacteria	4.69156	52.2	-	AOYC01	99	4791	4506	10/28/13	2/26/17	Contig	FDA	SAMN01823729	GCA_000486625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/625/GCA_000486625.1_ASM48662v1	24158624	ATCC 51962
Staphylococcus aureus FVRH6074	1409654	PRJNA223976	223976	Terrabacteria group	Firmicutes	2.89055	32.8	-	JBHX01	13	3049	2887	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381715	GCA_000542015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/015/GCA_000542015.1_Stap_aure_FVRH6074_V1	-	FVRH6074
Staphylococcus aureus OCMM6096	1409655	PRJNA223977	223977	Terrabacteria group	Firmicutes	2.88861	32.8	-	JBHW01	19	3031	2868	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381716	GCA_000542035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/035/GCA_000542035.1_Stap_aure_OCMM6096_V1	-	OCMM6096
Salmonella enterica subsp. enterica serovar Paratyphi B str. ATCC 19940	930775	PRJNA60523	60523	Proteobacteria	Gammaproteobacteria	4.69094	52.3	-	AOYD01	73	4782	4504	10/28/13	2/26/17	Contig	FDA	SAMN01823728	GCA_000486645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/645/GCA_000486645.1_ASM48664v1	24158624	ATCC 19940
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.79628	30.3	-	NFPH01	132	1925	1807	6/8/17	6/10/17	Contig	Swansea University	SAMN06888288	GCA_002178475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/475/GCA_002178475.1_ASM217847v1	28493321	isolate_H16
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.12273	37.8	-	MDOF01	57	3230	3130	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410795	GCA_001711735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/735/GCA_001711735.1_ASM171173v1	-	A49
Mycobacterium tuberculosis M1906	1448724	PRJNA235735	235735	Terrabacteria group	Actinobacteria	4.4157	65.6	-	JKLU01	75	4325	4101	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599070	GCA_000663805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/805/GCA_000663805.1_Myco_tube_M1906_V1	-	M1906
Escherichia coli HVH 20 (4-5865042)	1280971	PRJNA186053	186053	Proteobacteria	Gammaproteobacteria	5.23055	50.4	-	AVTM01	14	5319	4946	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885683	GCA_000456285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/285/GCA_000456285.1_Esch_coli_HVH_20_4-5865042_V1	-	HVH 20 (4-5865042)
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.0806	39.5	-	CMMD01	84	2280	2046	3/22/15	3/11/17	Contig	SC	SAMEA1029285	GCA_001119765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/765/GCA_001119765.1_7054_6_4	-	SMRU3076
Neisseria meningitidis	487	PRJNA264543	264543	Proteobacteria	Betaproteobacteria	2.16531	51.5	-	JSAU01	249	2270	1191	1/15/15	1/15/15	Contig	University of Pittsburgh	SAMN03135276	GCA_000818525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/525/GCA_000818525.1_ASM81852v1	-	NM3688
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.49022	66.3	-	CTCK01	75	6172	6015	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3301019	GCA_001375355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/355/GCA_001375355.1_202_Tsb_8_contigs_500	-	-
Acinetobacter baumannii LY9	1458926	PRJNA234343	234343	Proteobacteria	Gammaproteobacteria	4.08703	39	-	JDTD01	98	3999	3837	7/8/14	3/16/17	Contig	The Singapore Centre on Environmental Life Sciences Engineering	SAMN02583755	GCA_000723065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/065/GCA_000723065.1_Acinetobacter_baumannii_Genome_sequencing	24951812	LY9
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.117	35.3	-	CQCG01	18	2193	2068	3/22/15	3/17/17	Scaffold	SC	SAMEA1031527	GCA_001130545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/545/GCA_001130545.1_6630_6_6	-	BG-NI-009
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05367	41.2	-	CDTV01	58	2044	1950	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233802	GCA_000944055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/055/GCA_000944055.1_Velvet_assembly	-	B48Y
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.58399	50.7	-	FTUU01	352	5108	4394	1/28/17	2/26/17	Scaffold	SC	SAMEA2027493	GCA_900158215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/215/GCA_900158215.1_9803_4_19	-	2090STDY5461837
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.09312	28.3	-	FUNN01	32	3814	3631	2/14/17	2/23/17	Scaffold	SC	SAMEA3374985	GCA_900164635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/635/GCA_900164635.1_16852_2_13	-	VRECD0008
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.49934	57.3	-	CCHJ01	312	5692	5246	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602958	GCA_000822405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/405/GCA_000822405.1_62BG	-	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.08358	63.9	-	FVJK01	76	5086	4886	3/10/17	4/10/17	Scaffold	SC	SAMEA2275686	GCA_900134475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/475/GCA_900134475.1_12163_1_36	-	960
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23105	64	-	FVJL01	26	5274	5152	3/10/17	3/18/17	Scaffold	SC	SAMEA2275688	GCA_900134485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/485/GCA_900134485.1_12163_1_38	-	962
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.50965	57.2	-	CCHK01	147	5612	5266	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602959	GCA_000822425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/425/GCA_000822425.1_63BG	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.2555	28.8	-	FUNM01	48	4026	3831	2/14/17	2/23/17	Scaffold	SC	SAMEA3374983	GCA_900164645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/645/GCA_900164645.1_16852_2_11	-	VRECD0001
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.71302	50.7	-	FTUT01	349	5283	4552	1/28/17	2/26/17	Scaffold	SC	SAMEA2054564	GCA_900158225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/225/GCA_900158225.1_9803_4_18	-	2090STDY5461836
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05898	41.1	-	CEBC01	62	2051	1959	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234114	GCA_000944075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/075/GCA_000944075.1_Velvet_assembly	-	V35S
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.11409	35.5	-	CQES01	35	2196	2037	3/23/15	3/17/17	Scaffold	SC	SAMEA1031467	GCA_001133525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/525/GCA_001133525.1_6630_7_17	-	IT-NI-032
Acinetobacter baumannii LY8	1458925	PRJNA234343	234343	Proteobacteria	Gammaproteobacteria	4.04389	38.9	-	JDTC01	595	4190	3716	7/8/14	3/16/17	Contig	The Singapore Centre on Environmental Life Sciences Engineering	SAMN02583754	GCA_000723075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/075/GCA_000723075.1_Acinetobacter_baumannii_Genome_sequencing	24951812	LY8
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48785	66.3	-	CTCL01	77	6177	6012	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3301020	GCA_001375375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/375/GCA_001375375.1_203_2_5Pc_7_contigs_500	-	-
Neisseria meningitidis	487	PRJNA267549	267549	Proteobacteria	Betaproteobacteria	2.74772	51.1	-	JVVZ01	524	-	-	7/10/15	7/13/16	Contig	University of Washington	SAMN03197243	GCA_001062585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/585/GCA_001062585.1_ASM106258v1	26230489	1273_NMEN
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05688	39.6	-	CNTA02	137	2263	2057	3/23/15	3/11/17	Contig	SC	SAMEA1032525	GCA_001119845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/845/GCA_001119845.2_6999_4_15	-	119571
Escherichia coli HVH 21 (4-4517873)	1280972	PRJNA186054	186054	Proteobacteria	Gammaproteobacteria	5.37583	50.5	-	AVTN01	16	5548	5183	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885684	GCA_000456305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/305/GCA_000456305.1_Esch_coli_HVH_21_4-4517873_V1	-	HVH 21 (4-4517873)
Mycobacterium tuberculosis M1913	1448725	PRJNA235736	235736	Terrabacteria group	Actinobacteria	4.40984	65.6	-	JKLT01	75	4335	4107	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599071	GCA_000663825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/825/GCA_000663825.1_Myco_tube_M1913_V1	-	M1913
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.06859	37.8	-	MDON01	56	3162	3068	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410798	GCA_001711745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/745/GCA_001711745.1_ASM171174v1	-	A36
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.67172	30.5	-	NFPI01	77	1781	1686	6/8/17	6/10/17	Contig	Swansea University	SAMN06888287	GCA_002178495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/495/GCA_002178495.1_ASM217849v1	28493321	isolate_H15
Salmonella enterica subsp. enterica serovar Paratyphi B str. ATCC 8759	930777	PRJNA60527	60527	Proteobacteria	Gammaproteobacteria	4.79933	52.2	-	AOYE01	52	4905	4673	10/28/13	2/26/17	Contig	FDA	SAMN01805322	GCA_000486665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/665/GCA_000486665.1_ASM48666v1	24158624	ATCC 8759
Staphylococcus aureus OCMM6095	1409656	PRJNA223978	223978	Terrabacteria group	Firmicutes	2.78063	32.7	-	JBHV01	52	2885	2689	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381717	GCA_000542055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/055/GCA_000542055.1_Stap_aure_OCMM6095_V1	-	OCMM6095
Staphylococcus aureus GGMC6018	1409657	PRJNA223979	223979	Terrabacteria group	Firmicutes	2.89988	32.7	-	JBHU01	8	3053	2888	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381718	GCA_000542075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/075/GCA_000542075.1_Stap_aure_GGMC6018_V1	-	GGMC6018
Salmonella enterica subsp. enterica serovar Paratyphi B str. ATCC 10719	930774	PRJNA60521	60521	Proteobacteria	Gammaproteobacteria	4.69447	52.2	-	AOYF01	82	4778	4486	10/28/13	2/26/17	Contig	FDA	SAMN01823727	GCA_000486685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/685/GCA_000486685.1_ASM48668v1	24158624	ATCC 10719
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.69628	30.4	-	NFPL01	77	1802	1713	6/8/17	6/10/17	Contig	Swansea University	SAMN06888284	GCA_002178505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/505/GCA_002178505.1_ASM217850v1	28493321	isolate_H11
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.9941	37.8	-	MDNO01	17	3058	2983	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410813	GCA_001711785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/785/GCA_001711785.1_ASM171178v1	-	A538
Mycobacterium tuberculosis M1914	1448726	PRJNA235737	235737	Terrabacteria group	Actinobacteria	4.39268	65.6	-	JKLS01	88	4339	4119	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599072	GCA_000663845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/845/GCA_000663845.1_Myco_tube_M1914_V1	-	M1914
Escherichia coli HVH 22 (4-2258986)	1280973	PRJNA186055	186055	Proteobacteria	Gammaproteobacteria	5.06599	50.6	-	AVTO01	7	5203	4922	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885685	GCA_000456325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/325/GCA_000456325.1_Esch_coli_HVH_22_4-2258986_V1	-	HVH 22 (4-2258986)
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.16029	39.5	-	CMOG01	31	2402	2150	3/22/15	3/11/17	Contig	SC	SAMEA2061487	GCA_001119865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/865/GCA_001119865.1_9803_7_3	-	23F
Neisseria meningitidis	487	PRJNA260450	260450	Proteobacteria	Betaproteobacteria	2.29126	51.7	-	JRFI01	1527	2820	2665	10/22/15	10/22/15	Contig	University of Pittsburgh	SAMN03022906	GCA_001407255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/255/GCA_001407255.1_ASM140725v1	-	M12611
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48696	66.3	-	CTCM01	82	6173	6011	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3301021	GCA_001375395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/395/GCA_001375395.1_204_10Pc_6_contigs_500	-	-
Acinetobacter baumannii LY4	1458921	PRJNA234343	234343	Proteobacteria	Gammaproteobacteria	4.0127	39	-	JDSY01	105	3897	3746	7/8/14	3/16/17	Contig	The Singapore Centre on Environmental Life Sciences Engineering	SAMN02583750	GCA_000723125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/125/GCA_000723125.1_Acinetobacter_baumannii_Genome_sequencing	24951812	LY4
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.25214	35	-	CPYK01	27	2318	2209	3/23/15	3/17/17	Scaffold	SC	SAMEA1031445	GCA_001133625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/625/GCA_001133625.1_6630_6_1	-	BG-NI-003
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05287	41.2	-	CDWZ01	59	2041	1941	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233869	GCA_000944135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/135/GCA_000944135.1_Velvet_assembly	-	F7N
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.7071	50.8	-	FTVA01	371	5254	4543	1/28/17	2/26/17	Scaffold	SC	SAMEA2054568	GCA_900158265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/265/GCA_900158265.1_9803_4_23	-	2090STDY5461841
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.16499	28.8	-	FUNP01	31	3865	3696	2/14/17	2/23/17	Scaffold	SC	SAMEA3374988	GCA_900164665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/665/GCA_900164665.1_16852_2_16	-	VRECD0015
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.50102	57.3	-	CCHM01	232	5580	5171	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602960	GCA_000822445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/445/GCA_000822445.1_65BO	-	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.02314	64.1	-	FVJN01	12	5053	4867	3/10/17	3/18/17	Scaffold	SC	SAMEA2275693	GCA_900134495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/495/GCA_900134495.1_12163_1_42	-	967
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.32079	64.1	-	FSEY01	38	5412	5221	12/14/16	3/21/17	Scaffold	SC	SAMEA2275689	GCA_900134505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/505/GCA_900134505.1_12163_1_39	-	963
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.36629	57.4	-	CCHL01	212	5412	5043	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602961	GCA_000822465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/465/GCA_000822465.1_66BO	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.56956	28.6	-	FUNQ01	52	4432	4209	2/14/17	2/23/17	Scaffold	SC	SAMEA3374989	GCA_900164675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/675/GCA_900164675.1_16852_2_17	-	VRECD0007
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.6925	50.8	-	FTVD01	367	5299	4525	1/28/17	2/26/17	Scaffold	SC	SAMEA2054572	GCA_900158295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/295/GCA_900158295.1_9803_4_27	-	2090STDY5461845
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05422	41.1	-	CDTI01	60	2047	1953	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233791	GCA_000944315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/315/GCA_000944315.1_Velvet_assembly	-	B41M
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.18139	35.5	-	CPXW01	17	2234	2106	3/23/15	3/17/17	Scaffold	SC	SAMEA1031492	GCA_001134425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/425/GCA_001134425.1_6630_6_4	-	BG-NI-006
Acinetobacter baumannii LY5	1458922	PRJNA234343	234343	Proteobacteria	Gammaproteobacteria	3.99999	38.9	-	JDSZ01	85	3889	3743	7/8/14	3/16/17	Contig	The Singapore Centre on Environmental Life Sciences Engineering	SAMN02583751	GCA_000723145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/145/GCA_000723145.1_Acinetobacter_baumannii_Genome_sequencing	24951812	LY5
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48904	66.3	-	CUWV01	75	6168	6014	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3301022	GCA_001375415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/415/GCA_001375415.1_205_12_5Pc_3_contigs_500	-	-
Neisseria meningitidis	487	PRJNA362263	362263	Proteobacteria	Betaproteobacteria	2.08464	51.7	-	MTKL01	167	2462	2071	1/23/17	1/23/17	Contig	Christian Medical College	SAMN06237109	GCA_001968905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/968/905/GCA_001968905.1_ASM196890v1	-	VB418
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.0279	39.6	-	CRPL01	74	2233	2004	3/23/15	3/11/17	Contig	SC	SAMEA1024770	GCA_001119885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/885/GCA_001119885.1_6775_1_16	-	SMRU832
Escherichia coli HVH 24 (4-5985145)	1280975	PRJNA186057	186057	Proteobacteria	Gammaproteobacteria	4.90359	50.6	-	AVTP01	4	4962	4659	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885687	GCA_000456345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/345/GCA_000456345.1_Esch_coli_HVH_24_4-5985145_V1	-	HVH 24 (4-5985145)
Mycobacterium tuberculosis M1928	1448728	PRJNA235739	235739	Terrabacteria group	Actinobacteria	4.42615	65.6	-	JKLQ01	91	4348	4102	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599074	GCA_000663865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/865/GCA_000663865.1_Myco_tube_M1928_V1	-	M1928
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.96658	37.9	-	MDNQ01	19	3029	2950	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410780	GCA_001711805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/805/GCA_001711805.1_ASM171180v1	-	A536
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.67362	30.3	-	NFPM01	99	1741	1632	6/8/17	6/10/17	Contig	Swansea University	SAMN06888283	GCA_002178545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/545/GCA_002178545.1_ASM217854v1	28493321	isolate_H10
Salmonella enterica subsp. enterica serovar Paratyphi B str. ATCC BAA-1585	523829	PRJNA61149	61149	Proteobacteria	Gammaproteobacteria	4.80357	52	-	AOYG01	88	4839	4564	10/28/13	2/26/17	Contig	FDA	SAMN01805323	GCA_000486705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/705/GCA_000486705.1_ASM48670v1	24158624	ATCC BAA-1585
Staphylococcus aureus COAS6087	1409658	PRJNA223980	223980	Terrabacteria group	Firmicutes	2.97846	32.7	-	JBHT01	17	3157	2985	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381719	GCA_000542095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/095/GCA_000542095.1_Stap_aure_COAS6087_V1	-	COAS6087
Staphylococcus aureus SCLE6035	1409659	PRJNA223981	223981	Terrabacteria group	Firmicutes	2.89811	32.7	-	JBHS01	11	3056	2887	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381720	GCA_000542115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/115/GCA_000542115.1_Stap_aure_SCLE6035_V1	-	SCLE6035
Salmonella enterica subsp. enterica serovar Pullorum str. 19945	1079470	PRJNA72637	72637	Proteobacteria	Gammaproteobacteria	4.72892	52.2	-	AOYI01	59	4837	4396	10/28/13	2/26/17	Contig	FDA	SAMN01823731	GCA_000486745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/745/GCA_000486745.1_ASM48674v1	24158624	19945
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.62724	30.5	-	NFPO01	65	1720	1616	6/8/17	6/10/17	Contig	Swansea University	SAMN06888281	GCA_002178575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/575/GCA_002178575.1_ASM217857v1	28493321	isolate_D1
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.01289	37.8	-	MDNP01	33	3116	3027	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410829	GCA_001711815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/815/GCA_001711815.1_ASM171181v1	-	A537
Mycobacterium tuberculosis M1929	1448729	PRJNA235740	235740	Terrabacteria group	Actinobacteria	4.41906	65.6	-	JKLP01	73	4324	4111	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599075	GCA_000663885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/885/GCA_000663885.1_Myco_tube_M1929_V1	-	M1929
Escherichia coli HVH 25 (4-5851939)	1280976	PRJNA186058	186058	Proteobacteria	Gammaproteobacteria	5.65983	50.6	-	AVTQ01	26	6006	5520	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885688	GCA_000456365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/365/GCA_000456365.1_Esch_coli_HVH_25_4-5851939_V1	-	HVH 25 (4-5851939)
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09455	39.7	-	CLWO01	70	2246	2014	3/21/15	3/11/17	Contig	SC	SAMEA1025787	GCA_001119925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/925/GCA_001119925.1_6983_4_95	-	SMRU2303
Neisseria meningitidis	487	PRJNA362259	362259	Proteobacteria	Betaproteobacteria	2.12476	51.6	-	MTKJ01	181	2511	2091	1/23/17	1/23/17	Contig	Christian Medical College	SAMN06237080	GCA_001968915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/968/915/GCA_001968915.1_ASM196891v1	-	VB1222
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.4857	66.3	-	CUWW01	80	6172	6013	4/2/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3301023	GCA_001375435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/435/GCA_001375435.1_206_15Pc_2_contigs_500	-	-
Acinetobacter baumannii	470	PRJNA251418	251418	Proteobacteria	Gammaproteobacteria	3.87958	38.9	-	JNOT01	74	3682	3526	7/21/14	3/16/17	Contig	Walter Reed Army Institute of Research	SAMN02821219	GCA_000731965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/965/GCA_000731965.1_ASM73196v1	25805730	-
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.05743	35.3	-	CPVR01	27	2107	1967	3/23/15	3/17/17	Scaffold	SC	SAMEA1031476	GCA_001134625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/625/GCA_001134625.1_6630_7_3	-	DE-NI-037
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04024	41.2	-	CDVQ01	61	2026	1921	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233788	GCA_000944415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/415/GCA_000944415.1_Velvet_assembly	-	B38I
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.61093	50.7	-	FTVC01	342	5135	4408	1/28/17	2/26/17	Scaffold	SC	SAMEA2054573	GCA_900158305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/305/GCA_900158305.1_9803_4_28	-	2090STDY5461846
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.20397	28.6	-	FUNR01	28	4033	3848	2/14/17	2/23/17	Scaffold	SC	SAMEA3374991	GCA_900164685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/685/GCA_900164685.1_16852_2_19	-	VRECD0006
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.24869	57.5	-	CCHN01	62	5204	4973	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602962	GCA_000822485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/485/GCA_000822485.1_67BO	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.08311	64.1	-	FVJM01	27	5091	4957	3/10/17	3/18/17	Scaffold	SC	SAMEA2275690	GCA_900134515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/515/GCA_900134515.1_12163_1_40	-	964
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.89102	64.2	-	FSEZ01	15	4889	4746	12/14/16	3/21/17	Scaffold	SC	SAMEA2275691	GCA_900134525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/525/GCA_900134525.1_12163_1_41	-	965
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.6204	57	-	CCHO01	248	5778	5408	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602963	GCA_000822505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/505/GCA_000822505.1_68BO	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.11242	28.6	-	FUNS01	26	3846	3673	2/14/17	2/23/17	Scaffold	SC	SAMEA3374995	GCA_900164695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/695/GCA_900164695.1_16852_2_23	-	VRECD0011
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.57826	50.8	-	FTVE01	354	5055	4380	1/28/17	2/26/17	Scaffold	SC	SAMEA2054574	GCA_900158315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/315/GCA_900158315.1_9803_4_29	-	2090STDY5461847
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.01615	41.2	-	CDTE01	61	2032	1927	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233778	GCA_000944515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/515/GCA_000944515.1_Velvet_assembly	-	B32J
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	1.97139	35.2	-	CQBL01	16	2019	1902	3/23/15	3/17/17	Scaffold	SC	SAMEA1031506	GCA_001135525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/525/GCA_001135525.1_6630_5_1	-	BE-NI-001
Acinetobacter baumannii MRSN 3405	1409922	PRJNA251551	251551	Proteobacteria	Gammaproteobacteria	4.02748	38.8	-	JNOU01	143	3919	3713	7/21/14	3/16/17	Contig	Walter Reed Army Institute of Research	SAMN02836944	GCA_000731975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/975/GCA_000731975.1_ASM73197v1	23812239	-
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48909	66.3	-	CTCN01	77	6174	6013	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3301024	GCA_001375455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/455/GCA_001375455.1_207_15_111C_contigs_500	-	-
Neisseria meningitidis	487	PRJNA362264	362264	Proteobacteria	Betaproteobacteria	2.13842	51.6	-	MTKM01	203	2511	2103	1/23/17	1/23/17	Contig	Christian Medical College	SAMN06237110	GCA_001968925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/968/925/GCA_001968925.1_ASM196892v1	-	VB991
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.15984	39.5	-	CLMZ01	89	2410	2173	3/21/15	3/11/17	Contig	SC	SAMEA1029113	GCA_001119965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/965/GCA_001119965.1_6938_8_11	-	SMRU2723
Escherichia coli HVH 26 (4-5703913)	1280977	PRJNA186059	186059	Proteobacteria	Gammaproteobacteria	5.32339	50.6	-	AVTR01	16	5471	5098	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885689	GCA_000456385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/385/GCA_000456385.1_Esch_coli_HVH_26_4-5703913_V1	-	HVH 26 (4-5703913)
Mycobacterium tuberculosis M1932	1448730	PRJNA235741	235741	Terrabacteria group	Actinobacteria	4.39713	65.6	-	JKLO01	81	4334	4115	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599076	GCA_000663905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/905/GCA_000663905.1_Myco_tube_M1932_V1	-	M1932
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.94966	37.9	-	MDNK01	19	3015	2935	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410833	GCA_001711835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/835/GCA_001711835.1_ASM171183v1	-	A546
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.69024	30.5	-	NFPN01	160	1830	1704	6/8/17	6/10/17	Contig	Swansea University	SAMN06888282	GCA_002178585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/585/GCA_002178585.1_ASM217858v1	28493321	isolate_H1
Salmonella enterica subsp. enterica serovar Oranienburg str. 701	997334	PRJNA63685	63685	Proteobacteria	Gammaproteobacteria	4.60841	52.1	-	AOYL01	55	4671	4327	10/28/13	2/26/17	Contig	FDA	SAMN01805333	GCA_000486795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/795/GCA_000486795.1_ASM48679v1	24158624	701
Staphylococcus aureus WMCS6087	1409660	PRJNA223982	223982	Terrabacteria group	Firmicutes	2.87108	32.8	-	JBHR01	39	2986	2803	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381721	GCA_000542135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/135/GCA_000542135.1_Stap_aure_WMCS6087_V1	-	WMCS6087
Staphylococcus aureus UCIM6104	1409661	PRJNA223983	223983	Terrabacteria group	Firmicutes	2.9356	32.9	-	JBHQ01	22	3089	2913	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381722	GCA_000542155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/155/GCA_000542155.1_Stap_aure_UCIM6104_V1	-	UCIM6104
Salmonella enterica subsp. enterica serovar Senftenberg str. 423984-2	749961	PRJNA46895	46895	Proteobacteria	Gammaproteobacteria	4.71425	52.1	-	AOYP01	80	4756	4501	10/28/13	2/26/17	Contig	FDA	SAMN01813411	GCA_000486875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/875/GCA_000486875.1_ASM48687v1	24158624	423984-2
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.86777	30.1	-	NFPP01	151	2011	1837	6/8/17	6/10/17	Contig	Swansea University	SAMN06888280	GCA_002178595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/595/GCA_002178595.1_ASM217859v1	28493321	isolate_C9
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.05375	37.9	-	MDNM01	23	3130	3048	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410781	GCA_001711865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/865/GCA_001711865.1_ASM171186v1	-	A540
Mycobacterium tuberculosis M1948	1448731	PRJNA235742	235742	Terrabacteria group	Actinobacteria	4.4306	65.6	-	JKLN01	81	4334	4109	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599077	GCA_000663925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/925/GCA_000663925.1_Myco_tube_M1948_V1	-	M1948
Escherichia coli HVH 27 (4-7449267)	1280978	PRJNA186060	186060	Proteobacteria	Gammaproteobacteria	5.12334	50.5	-	AVTS01	15	5220	4876	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885690	GCA_000456405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/405/GCA_000456405.1_Esch_coli_HVH_27_4-7449267_V1	-	HVH 27 (4-7449267)
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.14216	39.7	-	CMVI01	113	2324	2023	3/23/15	3/11/17	Contig	SC	SAMEA1991758	GCA_001120105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/105/GCA_001120105.1_5756_5_7	-	270
Neisseria meningitidis	487	PRJNA362260	362260	Proteobacteria	Betaproteobacteria	2.1016	51.8	-	MTKK01	172	2474	2073	1/23/17	1/23/17	Contig	Christian Medical College	SAMN06237081	GCA_001968935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/968/935/GCA_001968935.1_ASM196893v1	-	VB19
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48956	66.3	-	CTCO01	76	6165	6014	3/26/15	3/18/17	Contig	CARDIFF UNIVERSITY	SAMEA3301025	GCA_001375475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/475/GCA_001375475.1_208_15_211Bb_contigs_500	-	-
Acinetobacter baumannii	470	PRJNA246624	246624	Proteobacteria	Gammaproteobacteria	3.94445	39	-	JMRW01	89	3810	3664	7/28/14	3/16/17	Contig	The First Affiliated Hospital of Zhejiang Chinese Medical University	SAMN02768887	GCA_000734775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/734/775/GCA_000734775.1_ASM73477v1	-	TCM206
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.01099	35.4	-	CPVM01	25	2046	1911	3/23/15	3/17/17	Scaffold	SC	SAMEA1031463	GCA_001138645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/645/GCA_001138645.1_6630_7_2	-	DE-NI-036
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04208	41.2	-	CDTO01	55	2023	1920	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233798	GCA_000944555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/555/GCA_000944555.1_Velvet_assembly	-	B45V
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.60118	50.8	-	FTVF01	342	5094	4406	1/28/17	2/26/17	Scaffold	SC	SAMEA2054575	GCA_900158325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/325/GCA_900158325.1_9803_4_30	-	2090STDY5461848
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.17852	28.8	-	FUNT01	31	3977	3772	2/14/17	2/23/17	Scaffold	SC	SAMEA3374999	GCA_900164705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/705/GCA_900164705.1_16852_2_27	-	VRECD0002
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.40925	57.4	-	CCHQ01	173	5487	5193	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602964	GCA_000822525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/525/GCA_000822525.1_69BO	-	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98471	64	-	FVJQ01	12	5027	4891	3/10/17	3/18/17	Scaffold	SC	SAMEA2275695	GCA_900134545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/545/GCA_900134545.1_12163_1_45	-	969
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.2312	64	-	FSFC01	21	5280	5156	12/14/16	3/21/17	Scaffold	SC	SAMEA2275699	GCA_900134555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/555/GCA_900134555.1_12163_1_48	-	973
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.64761	56.9	-	CCHP01	148	5811	5457	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602965	GCA_000822545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/545/GCA_000822545.1_70BO	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.12192	28.6	-	FUNU01	23	3888	3717	2/14/17	2/23/17	Scaffold	SC	SAMEA3375007	GCA_900164715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/715/GCA_900164715.1_16852_2_35	-	VRECD0038
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.58459	50.8	-	FTVG01	341	5081	4392	1/28/17	2/22/17	Scaffold	SC	SAMEA2054576	GCA_900158335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/335/GCA_900158335.1_9803_4_31	-	2090STDY5461849
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.0484	41.2	-	CDVY01	56	2038	1946	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233811	GCA_000944575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/575/GCA_000944575.1_Velvet_assembly	-	E03G
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.01635	35.2	-	CQDH01	14	2097	1986	3/22/15	3/17/17	Scaffold	SC	SAMEA1031437	GCA_001140025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/025/GCA_001140025.1_6630_6_15	-	DE-NI-006
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.91767	38.9	-	JPDG01	155	3802	3608	8/8/14	3/16/17	Contig	Northwestern University Feinberg School of Medicine	SAMN02867841	GCA_000738845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/845/GCA_000738845.1_ASM73884v1	25212612	ABBL099
Pseudomonas aeruginosa	287	PRJNA294638	294638	Proteobacteria	Gammaproteobacteria	6.66447	66	-	LJYZ01	183	6491	6257	11/17/15	3/18/17	Contig	Technical University of Denmark	SAMN04028042	GCA_001444755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/755/GCA_001444755.1_ASM144475v1	-	ATCC 33353
Neisseria meningitidis	487	PRJNA373937	373937	Proteobacteria	Betaproteobacteria	2.12855	51.6	-	MVBZ01	295	2485	2002	2/16/17	2/16/17	Contig	Christian Medical College	SAMN06319100	GCA_002001345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/345/GCA_002001345.1_ASM200134v1	-	VB734
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.14058	39.6	-	CNSK02	195	2323	2121	3/22/15	3/11/17	Contig	SC	SAMEA1032534	GCA_001120185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/185/GCA_001120185.2_6999_3_17	-	57144
Escherichia coli HVH 28 (4-0907367)	1280979	PRJNA186061	186061	Proteobacteria	Gammaproteobacteria	5.32752	50.5	-	AVTT01	7	5504	5139	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885691	GCA_000456425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/425/GCA_000456425.1_Esch_coli_HVH_28_4-0907367_V1	-	HVH 28 (4-0907367)
Mycobacterium tuberculosis M1955	1448732	PRJNA235743	235743	Terrabacteria group	Actinobacteria	4.41062	65.6	-	JKLM01	82	4342	4109	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599078	GCA_000663945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/945/GCA_000663945.1_Myco_tube_M1955_V1	-	M1955
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.9694	37.9	-	MDNV01	20	3039	2949	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410775	GCA_001711885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/885/GCA_001711885.1_ASM171188v1	-	A521-3
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.69603	30.3	-	NFPS01	86	1789	1649	6/8/17	6/10/17	Contig	Swansea University	SAMN06888277	GCA_002178635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/635/GCA_002178635.1_ASM217863v1	28493321	isolate_C6
Salmonella enterica subsp. enterica serovar Montevideo str. 8387	1079473	PRJNA72643	72643	Proteobacteria	Gammaproteobacteria	4.57627	52.3	-	AOYQ01	57	4650	4400	10/28/13	2/26/17	Contig	FDA	SAMN01823722	GCA_000486895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/895/GCA_000486895.1_ASM48689v1	24158624	8387
Staphylococcus aureus AGEN6042	1409662	PRJNA223984	223984	Terrabacteria group	Firmicutes	2.91085	32.8	-	JBHP01	21	3068	2898	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381723	GCA_000542175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/175/GCA_000542175.1_Stap_aure_AGEN6042_V1	-	AGEN6042
Staphylococcus aureus UCIM6105	1409663	PRJNA223985	223985	Terrabacteria group	Firmicutes	2.87645	32.9	-	JBHO01	20	3012	2852	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381724	GCA_000542195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/195/GCA_000542195.1_Stap_aure_UCIM6105_V1	-	UCIM6105
Salmonella enterica subsp. enterica serovar Miami str. 1923	1124955	PRJNA78455	78455	Proteobacteria	Gammaproteobacteria	4.6609	52.1	-	AOYS01	105	4803	4457	10/28/13	2/26/17	Contig	FDA	SAMN01823752	GCA_000486935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/935/GCA_000486935.1_ASM48693v1	24158624	1923
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.78327	30.2	-	NFPT01	83	1856	1712	6/8/17	6/10/17	Contig	Swansea University	SAMN06888276	GCA_002178655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/655/GCA_002178655.1_ASM217865v1	28493321	isolate_C5
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.01068	37.8	-	MDNX01	22	3097	3011	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410805	GCA_001711905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/905/GCA_001711905.1_ASM171190v1	-	A514
Mycobacterium tuberculosis M1956	1448733	PRJNA235744	235744	Terrabacteria group	Actinobacteria	4.38636	65.6	-	JKLL01	77	4323	4112	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599079	GCA_000663965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/965/GCA_000663965.1_Myco_tube_M1956_V1	-	M1956
Escherichia coli HVH 29 (4-3418073)	1280980	PRJNA186062	186062	Proteobacteria	Gammaproteobacteria	5.2666	50.7	-	AVTU01	7	5447	5139	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885692	GCA_000456445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/445/GCA_000456445.1_Esch_coli_HVH_29_4-3418073_V1	-	HVH 29 (4-3418073)
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.16251	39.6	-	CMJZ01	70	2423	2178	3/23/15	3/11/17	Contig	SC	SAMEA1025927	GCA_001120325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/325/GCA_001120325.1_7038_8_43	-	SMRU2251
Neisseria meningitidis	487	PRJNA373935	373935	Proteobacteria	Betaproteobacteria	2.13588	51.5	-	MVBY01	297	2520	1949	2/16/17	2/16/17	Contig	Christian Medical College	SAMN06319097	GCA_002001405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/405/GCA_002001405.1_ASM200140v1	-	VB35262
Pseudomonas aeruginosa	287	PRJNA294638	294638	Proteobacteria	Gammaproteobacteria	6.99314	65.9	-	LJZK01	170	6769	6516	11/17/15	3/18/17	Contig	Technical University of Denmark	SAMN04028053	GCA_001444915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/915/GCA_001444915.1_ASM144491v1	-	ATCC 33364
Acinetobacter baumannii Pulsotype 27	1449755	PRJEB4735	259902	Proteobacteria	Gammaproteobacteria	4.03141	38.8	-	CBXD01	160	3918	3755	9/5/14	3/16/17	Contig	UW	SAMEA3139099	GCA_000750855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/750/855/GCA_000750855.1_600_CLC	-	Pulsotype 27
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.05735	35.3	-	CPVH01	15	2128	2016	3/23/15	3/17/17	Scaffold	SC	SAMEA1031438	GCA_001140565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/565/GCA_001140565.1_6630_8_5	-	CZ-NI-008
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.20333	40.9	-	CDUW01	87	2217	2071	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233844	GCA_000944635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/635/GCA_000944635.1_Velvet_assembly	-	F20Q
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.60277	50.7	-	FTVH01	357	5152	4416	1/28/17	2/26/17	Scaffold	SC	SAMEA2054577	GCA_900158355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/355/GCA_900158355.1_9803_4_32	-	2090STDY5461850
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.24457	28.4	-	FUNV01	45	3991	3826	2/14/17	2/23/17	Scaffold	SC	SAMEA3375008	GCA_900164725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/725/GCA_900164725.1_16852_2_36	-	VRECD0040
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.6702	57.1	-	CCHS01	166	5900	5547	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602966	GCA_000822565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/565/GCA_000822565.1_71RE	-	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.95501	64.3	-	FVJT01	79	4945	4731	3/10/17	3/18/17	Scaffold	SC	SAMEA2275700	GCA_900134565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/565/GCA_900134565.1_12163_1_49	-	974
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.07395	64.2	-	FVJO01	9	5162	4976	3/10/17	3/18/17	Scaffold	SC	SAMEA2275697	GCA_900134575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/575/GCA_900134575.1_12163_1_47	-	971
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.63637	57.2	-	CCHU01	224	5859	5522	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602967	GCA_000822585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/585/GCA_000822585.1_72RE	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.35766	28.6	-	FUNW01	39	4126	3934	2/14/17	2/23/17	Scaffold	SC	SAMEA3375009	GCA_900164735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/735/GCA_900164735.1_16852_2_37	-	VRECD0041
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.70112	50.8	-	FTVJ01	384	5262	4522	1/28/17	2/26/17	Scaffold	SC	SAMEA2054579	GCA_900158365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/365/GCA_900158365.1_9803_4_34	-	2090STDY5461852
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05285	41.1	-	CDTJ01	72	2055	1941	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233787	GCA_000944655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/655/GCA_000944655.1_Velvet_assembly	-	B38A
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.02911	35.3	-	CPXM01	47	2091	1956	3/22/15	3/17/17	Scaffold	SC	SAMEA1031536	GCA_001142125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/125/GCA_001142125.1_6630_7_7	-	IT-NI-003
Acinetobacter baumannii	470	PRJNA257414	257414	Proteobacteria	Gammaproteobacteria	3.89016	39.1	-	JPXZ01	111	3821	3641	9/24/14	3/16/17	Contig	IMPaM	SAMN02951536	GCA_000757665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/665/GCA_000757665.1_ASM75766v1	25395633	A33405
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.85135	65.9	-	LLLB01	80	6617	6382	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128484	GCA_001449165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/165/GCA_001449165.1_WH-SGI-V-07057	26604259	WH-SGI-V-07057
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.08554	39.6	-	CMPQ01	89	2274	2019	3/23/15	3/11/17	Contig	SC	SAMEA2061505	GCA_001120345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/345/GCA_001120345.1_9803_7_60	-	type strain: N
Escherichia coli HVH 30 (4-2661829)	1280981	PRJNA186063	186063	Proteobacteria	Gammaproteobacteria	5.19818	50.5	-	AVTV01	15	5332	5016	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885693	GCA_000456465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/465/GCA_000456465.1_Esch_coli_HVH_30_4-2661829_V1	-	HVH 30 (4-2661829)
Mycobacterium tuberculosis M1959	1448734	PRJNA235746	235746	Terrabacteria group	Actinobacteria	4.42344	65.6	-	JKLK01	59	4320	4120	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599080	GCA_000663985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/663/985/GCA_000663985.1_Myco_tube_M1959_V1	-	M1959
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.94978	37.9	-	MDNU01	19	3016	2936	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410776	GCA_001711915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/915/GCA_001711915.1_ASM171191v1	-	A524
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.78781	30.2	-	NFPU01	70	1861	1715	6/8/17	6/10/17	Contig	Swansea University	SAMN06888275	GCA_002178675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/675/GCA_002178675.1_ASM217867v1	28493321	isolate_C4
Salmonella enterica subsp. enterica serovar Muenchen str. baa1674	1079478	PRJNA72655	72655	Proteobacteria	Gammaproteobacteria	4.64203	52.3	-	AOYT01	55	4708	4466	10/28/13	2/26/17	Contig	FDA	SAMN01823725	GCA_000486955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/955/GCA_000486955.1_ASM48695v1	24158624	baa1674
Staphylococcus aureus MISS6092	1409664	PRJNA223986	223986	Terrabacteria group	Firmicutes	2.85991	32.8	-	JBHN01	19	3001	2829	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381725	GCA_000542215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/215/GCA_000542215.1_Stap_aure_MISS6092_V1	-	MISS6092
Staphylococcus aureus UCIM6106	1409665	PRJNA223987	223987	Terrabacteria group	Firmicutes	2.86925	32.8	-	JBHM01	24	3008	2823	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381726	GCA_000542235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/235/GCA_000542235.1_Stap_aure_UCIM6106_V1	-	UCIM6106
Salmonella enterica subsp. enterica serovar Senftenberg str. 316235162	749964	PRJNA46901	46901	Proteobacteria	Gammaproteobacteria	4.7078	52.1	-	AOYU01	102	4746	4485	10/28/13	2/26/17	Contig	FDA	SAMN01813412	GCA_000486975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/975/GCA_000486975.1_ASM48697v1	24158624	316235162
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.86847	30.1	-	NFQB01	118	1998	1840	6/8/17	6/10/17	Contig	Swansea University	SAMN06888268	GCA_002178725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/725/GCA_002178725.1_ASM217872v1	28493321	isolate_C10
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.02718	37.8	-	MDNW01	25	3099	3014	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410773	GCA_001711935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/935/GCA_001711935.1_ASM171193v1	-	A517
Mycobacterium tuberculosis M1961	1448735	PRJNA235747	235747	Terrabacteria group	Actinobacteria	4.44493	65.6	-	JKLJ01	75	4357	4145	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599081	GCA_000664005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/005/GCA_000664005.1_Myco_tube_M1961_V1	-	M1961
Escherichia coli HVH 31 (4-2602156)	1280982	PRJNA186064	186064	Proteobacteria	Gammaproteobacteria	5.06388	50.5	-	AVTW01	6	5140	4796	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885694	GCA_000456485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/485/GCA_000456485.1_Esch_coli_HVH_31_4-2602156_V1	-	HVH 31 (4-2602156)
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.03946	39.6	-	CKHK01	46	2257	2031	3/21/15	3/11/17	Contig	SC	SAMEA1024007	GCA_001120365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/365/GCA_001120365.1_6631_2_2	-	3
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.08465	65.9	-	LLLA01	89	6823	6602	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128483	GCA_001449175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/175/GCA_001449175.1_WH-SGI-V-07074	26604259	WH-SGI-V-07074
Acinetobacter baumannii	470	PRJNA260883	260883	Proteobacteria	Gammaproteobacteria	3.71793	39.1	-	JRHB01	2	3509	3298	9/29/14	3/16/17	Contig	University Hospital- Biomedical Research Institute	SAMN03066975	GCA_000759395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/395/GCA_000759395.1_ASM75939v1	26205868	MAR002
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.05932	35.3	-	CPWP01	34	2130	2039	3/23/15	3/17/17	Scaffold	SC	SAMEA1031519	GCA_001142165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/165/GCA_001142165.1_6630_7_6	-	DE-NI-042
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03645	41.2	-	CDUU01	57	2019	1927	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233841	GCA_000944675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/675/GCA_000944675.1_Velvet_assembly	-	F19J
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.73697	50.5	-	FTVO01	424	5276	4518	1/28/17	2/26/17	Scaffold	SC	SAMEA2054633	GCA_900158415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/415/GCA_900158415.1_9803_4_39	-	2090STDY5461857
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.16993	28.7	-	FUNX01	38	3890	3704	2/14/17	2/23/17	Scaffold	SC	SAMEA3375010	GCA_900164745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/745/GCA_900164745.1_16852_2_38	-	VRECD0042
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.67117	57.2	-	CCHT01	142	5864	5556	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602968	GCA_000822605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/605/GCA_000822605.1_73RE	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.89035	64.2	-	FVJP01	15	4890	4741	3/10/17	3/18/17	Scaffold	SC	SAMEA2275696	GCA_900134585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/585/GCA_900134585.1_12163_1_46	-	970
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.91265	64.3	-	FSFB01	15	4873	4733	12/14/16	3/21/17	Scaffold	SC	SAMEA2275702	GCA_900134595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/595/GCA_900134595.1_12163_1_51	-	976
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.64105	57.2	-	CCHR01	131	5810	5530	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602969	GCA_000822625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/625/GCA_000822625.1_74RE	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.19601	28.3	-	FUNY01	35	3957	3794	2/14/17	2/23/17	Scaffold	SC	SAMEA3375011	GCA_900164755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/755/GCA_900164755.1_16852_2_39	-	VRECD0044
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.71542	50.5	-	FTVP01	404	5291	4484	1/28/17	2/26/17	Scaffold	SC	SAMEA2054634	GCA_900158425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/425/GCA_900158425.1_9803_4_40	-	2090STDY5461858
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05335	41.2	-	CEBG01	56	2041	1943	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234117	GCA_000944775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/775/GCA_000944775.1_Velvet_assembly	-	V36U
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.11411	35.2	-	CPWF01	34	2156	2014	3/23/15	3/17/17	Scaffold	SC	SAMEA1031523	GCA_001145805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/805/GCA_001145805.1_6630_7_12	-	IT-NI-018
Acinetobacter baumannii	470	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	4.06041	38.9	-	BBNF01	83	3932	3765	9/26/14	3/16/17	Contig	National Institute of Technology and Evaluation	SAMD00019514	GCA_000760395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/395/GCA_000760395.1_ASM76039v1	-	GTC 03322
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.79978	66	-	LLLD01	127	6571	6344	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128486	GCA_001449225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/225/GCA_001449225.1_WH-SGI-V-07068	26604259	WH-SGI-V-07068
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.14523	39.5	-	CMQG01	99	2402	2174	3/23/15	3/4/17	Contig	SC	SAMEA2061489	GCA_001120465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/465/GCA_001120465.1_9803_7_9	-	23A
Escherichia coli HVH 32 (4-3773988)	1280983	PRJNA186065	186065	Proteobacteria	Gammaproteobacteria	5.19633	50.6	-	AVTX01	10	5409	5049	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885695	GCA_000456505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/505/GCA_000456505.1_Esch_coli_HVH_32_4-3773988_V1	-	HVH 32 (4-3773988)
Mycobacterium tuberculosis M1967	1448736	PRJNA235748	235748	Terrabacteria group	Actinobacteria	4.4214	65.6	-	JKLI01	75	4320	4107	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599082	GCA_000664025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/025/GCA_000664025.1_Myco_tube_M1967_V1	-	M1967
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.05429	37.9	-	MDNN01	17	3141	3046	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410839	GCA_001711945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/945/GCA_001711945.1_ASM171194v1	-	A54
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.72325	30.4	-	NFQA01	75	1814	1711	6/8/17	6/10/17	Contig	Swansea University	SAMN06888269	GCA_002178735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/735/GCA_002178735.1_ASM217873v1	28493321	isolate_C12
Salmonella enterica subsp. enterica serovar Muenster str. 420	1124959	PRJNA78399	78399	Proteobacteria	Gammaproteobacteria	4.71358	52.2	-	AOYW01	53	4810	4537	10/28/13	2/26/17	Contig	FDA	SAMN01813420	GCA_000487015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/015/GCA_000487015.1_ASM48701v1	24158624	420
Staphylococcus aureus FVRH6065	1409668	PRJNA223990	223990	Terrabacteria group	Firmicutes	2.91554	32.8	-	JBHK01	21	3022	2879	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381729	GCA_000542255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/255/GCA_000542255.1_Stap_aure_FVRH6065_V1	-	FVRH6065
Staphylococcus aureus GGMC6024	1409670	PRJNA223992	223992	Terrabacteria group	Firmicutes	2.89606	32.8	-	JBHJ01	27	3041	2858	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381731	GCA_000542275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/275/GCA_000542275.1_Stap_aure_GGMC6024_V1	-	GGMC6024
Salmonella enterica subsp. enterica serovar Kentucky str. 5349	1029980	PRJNA66693	66693	Proteobacteria	Gammaproteobacteria	4.81142	52.1	-	AOYZ01	128	4907	4533	10/28/13	2/26/17	Contig	FDA	SAMN01805335	GCA_000487075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/075/GCA_000487075.1_ASM48707v1	24158624	5349
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.64389	30.5	-	NFQC01	73	1728	1637	6/8/17	6/10/17	Contig	Swansea University	SAMN06888267	GCA_002178775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/775/GCA_002178775.1_ASM217877v1	28493321	isolate_C1
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.00177	37.8	-	MDNH01	25	3065	2984	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410818	GCA_001711985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/985/GCA_001711985.1_ASM171198v1	-	A552
Mycobacterium tuberculosis M1973	1448737	PRJNA235749	235749	Terrabacteria group	Actinobacteria	4.38848	65.6	-	JKLH01	89	4330	4111	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599083	GCA_000664045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/045/GCA_000664045.1_Myco_tube_M1973_V1	-	M1973
Escherichia coli HVH 33 (4-2174936)	1280984	PRJNA186066	186066	Proteobacteria	Gammaproteobacteria	5.16803	50.7	-	AVTY01	7	5340	4959	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885696	GCA_000456525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/525/GCA_000456525.1_Esch_coli_HVH_33_4-2174936_V1	-	HVH 33 (4-2174936)
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.08991	39.7	-	CMQJ01	64	2322	2090	3/23/15	3/4/17	Contig	SC	SAMEA2061733	GCA_001120505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/505/GCA_001120505.1_9803_8_1	-	19F
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.39299	66.4	-	LLLE01	79	6073	5897	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128487	GCA_001449245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/245/GCA_001449245.1_WH-SGI-V-07049	26604259	WH-SGI-V-07049
Acinetobacter baumannii	470	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	4.05978	38.9	-	BBNG01	87	3942	3764	9/26/14	3/16/17	Contig	National Institute of Technology and Evaluation	SAMD00019515	GCA_000760415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/415/GCA_000760415.1_ASM76041v1	-	GTC 03323
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.02517	35.3	-	CQDV01	33	2078	1966	3/23/15	3/17/17	Scaffold	SC	SAMEA1031419	GCA_001146325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/325/GCA_001146325.1_6630_7_18	-	IT-NI-033
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.21062	41.1	-	CDSW01	120	2234	2022	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233762	GCA_000944815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/815/GCA_000944815.1_Velvet_assembly	-	B21Q
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.66297	50.5	-	FTVT01	483	5159	4400	1/28/17	2/26/17	Scaffold	SC	SAMEA2054638	GCA_900158465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/465/GCA_900158465.1_9803_4_44	-	2090STDY5461862
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.15454	28.7	-	FUNZ01	29	3896	3697	2/14/17	2/23/17	Scaffold	SC	SAMEA3375013	GCA_900164765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/765/GCA_900164765.1_16852_2_41	-	VRECD0047
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.68067	57.1	-	CCHW01	121	5886	5571	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602970	GCA_000822645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/645/GCA_000822645.1_75RE	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.35952	64.1	-	FSFE01	37	5441	5277	12/14/16	3/21/17	Scaffold	SC	SAMEA2275704	GCA_900134605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/605/GCA_900134605.1_12163_1_53	-	978
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.17815	64.2	-	FVJR01	50	5187	5021	3/10/17	3/18/17	Scaffold	SC	SAMEA2275701	GCA_900134615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/615/GCA_900134615.1_12163_1_50	-	975
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.53473	57.3	-	CCHX01	77	5570	5281	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602971	GCA_000822665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/665/GCA_000822665.1_76RE	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.06591	28.3	-	FUOB01	26	3774	3621	2/14/17	2/23/17	Scaffold	SC	SAMEA3375014	GCA_900164775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/775/GCA_900164775.1_16852_2_42	-	VRECD0048
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.66414	50.5	-	FTVW01	392	5242	4397	1/28/17	2/26/17	Scaffold	SC	SAMEA2054642	GCA_900158495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/495/GCA_900158495.1_9803_4_48	-	2090STDY5461866
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.0419	41.1	-	CDWT01	62	2030	1917	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233855	GCA_000944875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/875/GCA_000944875.1_Velvet_assembly	-	F48Y
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.09159	35.2	-	CQBC01	44	2172	2052	3/22/15	3/17/17	Scaffold	SC	SAMEA1031521	GCA_001147165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/165/GCA_001147165.1_6630_8_7	-	CZ-NI-010
Acinetobacter baumannii	470	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.81534	38.9	-	BBNH01	37	3629	3514	9/26/14	3/16/17	Contig	National Institute of Technology and Evaluation	SAMD00019516	GCA_000760435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/435/GCA_000760435.1_ASM76043v1	-	GTC 03324
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.45198	66.4	-	LLLG01	43	6138	5983	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128489	GCA_001449255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/255/GCA_001449255.1_WH-SGI-V-07073	26604259	WH-SGI-V-07073
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.11788	39.7	-	CMTW01	63	2277	1979	3/23/15	3/6/17	Contig	SC	SAMEA1022925	GCA_001120525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/525/GCA_001120525.1_5737_3_3	-	20061
Escherichia coli HVH 35 (4-2962667)	1280985	PRJNA186067	186067	Proteobacteria	Gammaproteobacteria	5.21438	50.6	-	AVTZ01	14	5383	5050	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885697	GCA_000456545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/545/GCA_000456545.1_Esch_coli_HVH_35_4-2962667_V1	-	HVH 35 (4-2962667)
Mycobacterium tuberculosis M1976	1448738	PRJNA235750	235750	Terrabacteria group	Actinobacteria	4.43891	65.6	-	JKLG01	86	4353	4111	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599084	GCA_000664065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/065/GCA_000664065.1_Myco_tube_M1976_V1	-	M1976
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.01327	37.8	-	MDNS01	36	3123	3027	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410811	GCA_001711995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/711/995/GCA_001711995.1_ASM171199v1	-	A531
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.66027	30.4	-	NFQD01	86	1755	1656	6/8/17	6/10/17	Contig	Swansea University	SAMN06888266	GCA_002178795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/795/GCA_002178795.1_ASM217879v1	28493321	isolate_B4
Salmonella enterica subsp. enterica serovar Javiana str. 10721	1079474	PRJNA72647	72647	Proteobacteria	Gammaproteobacteria	4.69749	52.1	-	AOZA01	78	4820	4529	10/28/13	2/26/17	Contig	FDA	SAMN01823718	GCA_000487095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/095/GCA_000487095.1_ASM48709v1	24158624	10721
Staphylococcus aureus WAMC6043	1409671	PRJNA223993	223993	Terrabacteria group	Firmicutes	2.9216	32.8	-	JBHI01	10	3083	2923	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381732	GCA_000542295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/295/GCA_000542295.1_Stap_aure_WAMC6043_V1	-	WAMC6043
Staphylococcus aureus OCMM6102	1409672	PRJNA223994	223994	Terrabacteria group	Firmicutes	2.94175	32.7	-	JBHH01	10	3124	2961	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381733	GCA_000542315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/315/GCA_000542315.1_Stap_aure_OCMM6102_V1	-	OCMM6102
Salmonella enterica subsp. enterica serovar Javiana str. PRS_2010_0720	945541	PRJNA61941	61941	Proteobacteria	Gammaproteobacteria	4.73795	52.1	-	AOZB01	115	4858	4574	10/28/13	2/26/17	Contig	FDA	SAMN01813416	GCA_000487115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/115/GCA_000487115.1_ASM48711v1	24158624	PRS_2010_0720
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.61814	30.4	-	NFQF01	172	1696	1559	6/8/17	6/10/17	Contig	Swansea University	SAMN06888264	GCA_002178805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/805/GCA_002178805.1_ASM217880v1	28493321	isolate_B2
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.02767	37.8	-	MDNR01	19	3112	3029	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410812	GCA_001712025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/025/GCA_001712025.1_ASM171202v1	-	A535
Mycobacterium tuberculosis M1978	1448739	PRJNA235751	235751	Terrabacteria group	Actinobacteria	4.41921	65.6	-	JKLF01	81	4331	4098	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599085	GCA_000664085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/085/GCA_000664085.1_Myco_tube_M1978_V1	-	M1978
Escherichia coli HVH 37 (4-2773848)	1280987	PRJNA186069	186069	Proteobacteria	Gammaproteobacteria	5.15746	50.5	-	AVUA01	13	5336	5014	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885699	GCA_000456565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/565/GCA_000456565.1_Esch_coli_HVH_37_4-2773848_V1	-	HVH 37 (4-2773848)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00894	39.6	-	CNUY02	166	2188	1954	3/23/15	3/11/17	Contig	SC	SAMEA1032524	GCA_001120545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/545/GCA_001120545.2_6999_6_18	-	304793
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.45478	66.4	-	LLLH01	48	6137	5983	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128490	GCA_001449275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/275/GCA_001449275.1_WH-SGI-V-07071	26604259	WH-SGI-V-07071
Acinetobacter baumannii	470	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	4.05966	38.9	-	BBNI01	92	3943	3759	9/26/14	3/16/17	Contig	National Institute of Technology and Evaluation	SAMD00019518	GCA_000760455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/455/GCA_000760455.1_ASM76045v1	-	GTC 03328
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.1633	35.4	-	CQDE01	68	2247	2087	3/23/15	3/17/17	Scaffold	SC	SAMEA1031499	GCA_001152205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/205/GCA_001152205.1_6630_7_5	-	DE-NI-041
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03241	41.2	-	CDUC01	56	2022	1931	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233819	GCA_000944915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/915/GCA_000944915.1_Velvet_assembly	-	E14M
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.55501	50.8	-	FTVY01	374	5047	4321	1/28/17	2/26/17	Scaffold	SC	SAMEA2054643	GCA_900158505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/505/GCA_900158505.1_9803_4_49	-	2090STDY5461867
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.20591	28.6	-	FUOA01	36	4016	3845	2/14/17	2/23/17	Scaffold	SC	SAMEA3375015	GCA_900164785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/785/GCA_900164785.1_16852_2_43	-	VRECD0049
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.32942	57.4	-	CCHV01	83	5366	5109	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602972	GCA_000822685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/685/GCA_000822685.1_77RE	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.43143	63.9	-	FSFF01	24	5538	5336	12/14/16	3/21/17	Scaffold	SC	SAMEA2275703	GCA_900134625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/625/GCA_900134625.1_12163_1_52	-	977
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.02389	64.1	-	FVJU01	8	5107	4942	3/10/17	3/18/17	Scaffold	SC	SAMEA2275820	GCA_900134635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/635/GCA_900134635.1_12163_2_63	-	1094
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.18509	57.6	-	CCHY01	220	5264	4921	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602973	GCA_000822705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/705/GCA_000822705.1_78RE	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.19849	28.5	-	FUOC01	42	3989	3784	2/14/17	2/23/17	Scaffold	SC	SAMEA3375017	GCA_900164795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/795/GCA_900164795.1_16852_2_45	-	VRECD0051
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.50489	50.8	-	FTVX01	382	5069	4274	1/28/17	2/26/17	Scaffold	SC	SAMEA2054644	GCA_900158515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/515/GCA_900158515.1_9803_4_50	-	2090STDY5461868
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05361	41.1	-	CDXK01	58	2044	1954	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234042	GCA_000944935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/935/GCA_000944935.1_Velvet_assembly	-	type strain: S2
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.11674	35.5	-	CPZR01	33	2193	2064	3/22/15	3/17/17	Scaffold	SC	SAMEA1031485	GCA_001153505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/505/GCA_001153505.1_6630_5_8	-	DK-NI-004
Acinetobacter baumannii	470	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.81496	38.9	-	BBNJ01	44	3624	3516	9/26/14	3/16/17	Contig	National Institute of Technology and Evaluation	SAMD00019519	GCA_000760475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/760/475/GCA_000760475.1_ASM76047v1	-	GTC 03329
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.31128	66.5	-	LLLJ01	67	5987	5834	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128492	GCA_001449305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/305/GCA_001449305.1_WH-SGI-V-07063	26604259	WH-SGI-V-07063
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0892	39.6	-	CNSO02	158	2283	2066	3/22/15	3/11/17	Contig	SC	SAMEA1032574	GCA_001120765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/765/GCA_001120765.2_6999_3_16	-	51715
Escherichia coli HVH 38 (4-2774682)	1280988	PRJNA186070	186070	Proteobacteria	Gammaproteobacteria	5.30512	50.5	-	AVUB01	16	5301	4962	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885700	GCA_000456585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/585/GCA_000456585.1_Esch_coli_HVH_38_4-2774682_V1	-	HVH 38 (4-2774682)
Mycobacterium tuberculosis M1979	1448740	PRJNA235752	235752	Terrabacteria group	Actinobacteria	4.42368	65.6	-	JKLE01	85	4331	4110	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599086	GCA_000664105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/105/GCA_000664105.1_Myco_tube_M1979_V1	-	M1979
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.9668	37.9	-	MDNI01	14	3037	2950	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410817	GCA_001712035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/035/GCA_001712035.1_ASM171203v1	-	A550-1
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.8193	30.2	-	NFQK01	134	1938	1805	6/8/17	6/10/17	Contig	Swansea University	SAMN06888259	GCA_002178915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/915/GCA_002178915.1_ASM217891v1	28493321	isolate_2
Salmonella enterica subsp. enterica serovar Indiana str. ATCC 51959	1173850	PRJNA161439	161439	Proteobacteria	Gammaproteobacteria	4.70493	52.1	-	AOZC01	72	4816	4529	10/28/13	2/26/17	Contig	FDA	SAMN01823715	GCA_000487135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/135/GCA_000487135.1_ASM48713v1	24158624	ATCC 51959
Staphylococcus aureus UCIM6115	1409676	PRJNA223998	223998	Terrabacteria group	Firmicutes	2.84818	32.8	-	JBHE01	13	2978	2809	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381737	GCA_000542335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/335/GCA_000542335.1_Stap_aure_UCIM6115_V1	-	UCIM6115
Staphylococcus aureus UCIM6119	1409677	PRJNA223999	223999	Terrabacteria group	Firmicutes	2.89389	32.8	-	JBHD01	46	3061	2853	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381738	GCA_000542355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/355/GCA_000542355.1_Stap_aure_UCIM6119_V1	-	UCIM6119
Salmonella enterica subsp. enterica serovar Hadar str. ATCC 51956	1124933	PRJNA78389	78389	Proteobacteria	Gammaproteobacteria	4.69508	52.2	-	AOZE01	65	4756	4445	10/28/13	2/26/17	Contig	FDA	SAMN01823714	GCA_000487175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/175/GCA_000487175.1_ASM48717v1	24158624	ATCC 51956
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.61192	30.5	-	NFMU01	135	1688	1565	6/8/17	6/10/17	Contig	Swansea University	SAMN06888353	GCA_002179005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/005/GCA_002179005.1_ASM217900v1	28493321	isolate_W4
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.04814	37.7	-	MDMT01	42	3131	3037	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410687	GCA_001712045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/045/GCA_001712045.1_ASM171204v1	-	Lm119
Mycobacterium tuberculosis M2003	1448742	PRJNA235754	235754	Terrabacteria group	Actinobacteria	4.42796	65.6	-	JKLD01	79	4322	4101	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599088	GCA_000664125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/125/GCA_000664125.1_Myco_tube_M2003_V1	-	M2003
Escherichia coli HVH 39 (4-2679949)	1280989	PRJNA186071	186071	Proteobacteria	Gammaproteobacteria	5.07718	50.4	-	AVUC01	19	5183	4818	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885701	GCA_000456605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/605/GCA_000456605.1_Esch_coli_HVH_39_4-2679949_V1	-	HVH 39 (4-2679949)
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.18587	39.6	-	CLPF01	61	2447	2189	3/21/15	3/4/17	Contig	SC	SAMEA1029174	GCA_001120885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/885/GCA_001120885.1_6949_3_1	-	SMRU2449
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.3566	66.5	-	LLLK01	60	6039	5884	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128493	GCA_001449325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/325/GCA_001449325.1_WH-SGI-V-07070	26604259	WH-SGI-V-07070
Acinetobacter baumannii	470	PRJNA258276	258276	Proteobacteria	Gammaproteobacteria	4.31136	39.2	-	JQSF01	90	4279	4067	10/3/14	3/16/17	Contig	IMPaM	SAMN02991271	GCA_000763365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/365/GCA_000763365.1_ASM76336v1	25428965	A144
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	1.99165	35.3	-	CPXV01	28	2057	1923	3/22/15	3/17/17	Scaffold	SC	SAMEA1031443	GCA_001155125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/125/GCA_001155125.1_6630_6_19	-	DE-NI-0013
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.0964	41.1	-	CDWC01	57	2075	1982	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233833	GCA_000944975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/975/GCA_000944975.1_Velvet_assembly	-	E57C
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.76771	50.4	-	FTVZ01	427	5331	4545	1/28/17	2/26/17	Scaffold	SC	SAMEA2054645	GCA_900158525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/525/GCA_900158525.1_9803_4_51	-	2090STDY5461869
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.10032	28.5	-	FUOE01	29	3845	3652	2/14/17	2/23/17	Scaffold	SC	SAMEA3375018	GCA_900164805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/805/GCA_900164805.1_16852_2_46	-	VRECD0052
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.50085	57.3	-	CCHZ01	171	5562	5236	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602974	GCA_000822725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/725/GCA_000822725.1_79RE	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.06143	64.1	-	FSFD01	11	5078	4964	12/14/16	3/22/17	Scaffold	SC	SAMEA2275816	GCA_900134645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/645/GCA_900134645.1_12163_2_59	-	1090
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.02318	64.1	-	FVJS01	10	5112	4941	3/10/17	3/18/17	Scaffold	SC	SAMEA2275819	GCA_900134655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/655/GCA_900134655.1_12163_2_62	-	1093
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.38977	57.4	-	CCIA01	381	5567	5110	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602975	GCA_000822745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/745/GCA_000822745.1_81RE	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.30872	29.2	-	FUOD01	30	4082	3885	2/14/17	2/23/17	Scaffold	SC	SAMEA3375019	GCA_900164815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/815/GCA_900164815.1_16852_2_47	-	VRECD0053
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.48971	50.8	-	FTWA01	364	5027	4274	1/28/17	3/2/17	Scaffold	SC	SAMEA2054646	GCA_900158535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/535/GCA_900158535.1_9803_4_52	-	2090STDY5461870
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04813	41.2	-	CEBL01	51	2037	1943	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234038	GCA_000945055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/055/GCA_000945055.1_Velvet_assembly	-	S2P
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.06117	35.3	-	CPWW01	14	2128	2008	3/23/15	3/17/17	Scaffold	SC	SAMEA1031481	GCA_001155785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/785/GCA_001155785.1_6630_8_10	-	CZ-NI-015
Acinetobacter baumannii	470	PRJNA257765	257765	Proteobacteria	Gammaproteobacteria	3.8801	38.9	-	JQSD01	149	3745	3585	10/10/14	3/16/17	Contig	University of Malaya	SAMN02978813	GCA_000766105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/766/105/GCA_000766105.1_ASM76610v1	-	341
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.84104	66.1	-	LLLO01	115	6625	6385	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128497	GCA_001449365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/365/GCA_001449365.1_WH-SGI-V-07051	26604259	WH-SGI-V-07051
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09516	39.6	-	CNRM02	152	2263	2064	3/23/15	3/11/17	Contig	SC	SAMEA1032485	GCA_001120925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/925/GCA_001120925.2_6999_1_5	-	R34-3188
Escherichia coli HVH 40 (4-1219782)	1280990	PRJNA186072	186072	Proteobacteria	Gammaproteobacteria	5.22892	50.5	-	AVUD01	8	5393	5041	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885702	GCA_000456625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/625/GCA_000456625.1_Esch_coli_HVH_40_4-1219782_V1	-	HVH 40 (4-1219782)
Mycobacterium tuberculosis M2006	1448743	PRJNA235755	235755	Terrabacteria group	Actinobacteria	4.40201	65.6	-	JKLC01	110	4339	4093	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599089	GCA_000664145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/145/GCA_000664145.1_Myco_tube_M2006_V1	-	M2006
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.02686	37.8	-	MDNG01	26	3113	3026	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410819	GCA_001712105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/105/GCA_001712105.1_ASM171210v1	-	A555
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.59329	30.4	-	NFMW01	46	1652	1564	6/8/17	6/10/17	Contig	Swansea University	SAMN06888351	GCA_002179015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/015/GCA_002179015.1_ASM217901v1	28493321	isolate_W37
Salmonella enterica subsp. enterica serovar Give str. 564	1124980	PRJNA78401	78401	Proteobacteria	Gammaproteobacteria	4.70989	52.2	-	AOZG01	41	4795	4498	10/28/13	2/26/17	Contig	FDA	SAMN01813421	GCA_000487215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/215/GCA_000487215.1_ASM48721v1	24158624	564
Staphylococcus aureus KINW6040	1409678	PRJNA224000	224000	Terrabacteria group	Firmicutes	2.94177	32.8	-	JBHC01	24	3088	2920	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381739	GCA_000542375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/375/GCA_000542375.1_Stap_aure_KINW6040_V1	-	KINW6040
Staphylococcus aureus LAMC6106	1409680	PRJNA224002	224002	Terrabacteria group	Firmicutes	2.85601	32.8	-	JBHA01	25	2997	2820	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381741	GCA_000542415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/415/GCA_000542415.1_Stap_aure_LAMC6106_V1	-	LAMC6106
Salmonella enterica subsp. enterica serovar Derby str. 626	1124929	PRJNA78403	78403	Proteobacteria	Gammaproteobacteria	4.80655	52	-	AOZH01	261	5016	4483	10/28/13	2/26/17	Contig	FDA	SAMN01813422	GCA_000487235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/235/GCA_000487235.1_ASM48723v1	24158624	626
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.59366	30.4	-	NFMY01	53	1656	1566	6/8/17	6/10/17	Contig	Swansea University	SAMN06888349	GCA_002179045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/045/GCA_002179045.1_ASM217904v1	28493321	isolate_W35
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.04943	37.7	-	MDMS01	45	3128	3036	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410688	GCA_001712115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/115/GCA_001712115.1_ASM171211v1	-	Lm133
Mycobacterium tuberculosis M2007	1448744	PRJNA235756	235756	Terrabacteria group	Actinobacteria	4.40993	65.6	-	JKLB01	83	4324	4098	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599090	GCA_000664165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/165/GCA_000664165.1_Myco_tube_M2007_V1	-	M2007
Escherichia coli HVH 41 (4-2677849)	1280991	PRJNA186073	186073	Proteobacteria	Gammaproteobacteria	5.47233	50.5	-	AVUE01	21	5605	5199	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885703	GCA_000456645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/645/GCA_000456645.1_Esch_coli_HVH_41_4-2677849_V1	-	HVH 41 (4-2677849)
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.17247	39.6	-	CKXI01	66	2429	2173	3/21/15	3/4/17	Contig	SC	SAMEA1026122	GCA_001120945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/945/GCA_001120945.1_6823_6_4	-	SMRU1972
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.89615	66.1	-	LLLQ01	77	6671	6454	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128499	GCA_001449395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/395/GCA_001449395.1_WH-SGI-V-07066	26604259	WH-SGI-V-07066
Acinetobacter baumannii AB5075	1116234	PRJNA168474	168474	Proteobacteria	Gammaproteobacteria	3.99987	38.8896	plasmid pAB5075:NZ_JHUI01000005.1/JHUI01000005.1	JHUI01	16	3906	3763	10/31/14	3/16/17	Contig	J. Craig Venter Institute	SAMN02713669	GCA_000770605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/605/GCA_000770605.1_gabab5075v1.0	-	AB5075
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.05771	35.3	-	CPVB01	13	2128	2006	3/23/15	3/17/17	Scaffold	SC	SAMEA1031537	GCA_001155905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/905/GCA_001155905.1_6630_8_3	-	CZ-NI-006
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.1038	41.1	-	CDXA01	55	2109	2008	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233989	GCA_000945075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/075/GCA_000945075.1_Velvet_assembly	-	S11P
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.72951	50.5	-	FTWE01	411	5330	4473	1/28/17	2/26/17	Scaffold	SC	SAMEA2054649	GCA_900158565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/565/GCA_900158565.1_9803_4_55	-	2090STDY5461873
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.4349	28.5	-	FUOI01	36	4214	4048	2/14/17	2/23/17	Scaffold	SC	SAMEA3375022	GCA_900164825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/825/GCA_900164825.1_16852_2_50	-	VRECD0056
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.75586	57	-	CCIC01	193	5806	5448	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602976	GCA_000822765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/765/GCA_000822765.1_82RE	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.60241	64	-	FSFG01	21	5759	5589	12/14/16	3/21/17	Scaffold	SC	SAMEA2275821	GCA_900134665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/665/GCA_900134665.1_12163_2_64	-	1095
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.97471	64.1	-	FVJY01	7	4949	4812	3/10/17	3/18/17	Scaffold	SC	SAMEA2275848	GCA_900134675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/675/GCA_900134675.1_12163_2_82	-	1122
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.42747	57.4	-	CCID01	248	5557	5168	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602977	GCA_000822785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/785/GCA_000822785.1_83RE	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.19631	28.5	-	FUOF01	30	3945	3773	2/14/17	2/23/17	Scaffold	SC	SAMEA3375021	GCA_900164835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/835/GCA_900164835.1_16852_2_49	-	VRECD0055
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.72315	50.5	-	FTWJ01	428	5337	4483	1/28/17	2/26/17	Scaffold	SC	SAMEA2054654	GCA_900158605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/605/GCA_900158605.1_9803_4_60	-	2090STDY5461878
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04291	41.2	-	CDTQ01	53	2027	1923	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233804	GCA_000945095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/095/GCA_000945095.1_Velvet_assembly	-	CU2Z
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.10311	35.4	-	CQEL01	14	2152	2073	3/23/15	3/17/17	Scaffold	SC	SAMEA1031498	GCA_001156365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/365/GCA_001156365.1_6630_5_17	-	DK-NI-014
Acinetobacter baumannii TYTH-5	1100845	PRJNA74561	74561	Proteobacteria	Gammaproteobacteria	3.78829	38.8	-	AGST01	199	3636	3511	11/4/14	3/16/17	Contig	National Tsing Hua University	SAMN03160858	GCA_000770785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/785/GCA_000770785.1_ASM77078v1	-	TYTH-5
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.34073	66.5	-	LLLR01	73	5999	5839	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128500	GCA_001449425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/425/GCA_001449425.1_WH-SGI-V-07069	26604259	WH-SGI-V-07069
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09171	39.6	-	CKYX01	62	2322	2073	3/21/15	3/11/17	Contig	SC	SAMEA1026226	GCA_001121025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/025/GCA_001121025.1_6840_1_1	-	SMRU1753
Escherichia coli HVH 42 (4-2100061)	1280992	PRJNA186074	186074	Proteobacteria	Gammaproteobacteria	5.37081	50.6	-	AVUF01	8	5515	5190	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885704	GCA_000456665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/665/GCA_000456665.1_Esch_coli_HVH_42_4-2100061_V1	-	HVH 42 (4-2100061)
Mycobacterium tuberculosis M2010	1448745	PRJNA235757	235757	Terrabacteria group	Actinobacteria	4.43094	65.6	-	JKLA01	87	4330	4113	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599091	GCA_000664185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/185/GCA_000664185.1_Myco_tube_M2010_V1	-	M2010
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.02204	37.9	-	MDMX01	31	3060	2972	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410683	GCA_001712135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/135/GCA_001712135.1_ASM171213v1	-	Lm112
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.63715	30.4	-	NFMZ01	47	1724	1623	6/8/17	6/10/17	Contig	Swansea University	SAMN06888348	GCA_002179075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/075/GCA_002179075.1_ASM217907v1	28493321	isolate_W34
Salmonella enterica subsp. enterica serovar Cerro str. 818	1124928	PRJNA78409	78409	Proteobacteria	Gammaproteobacteria	4.73664	52.1	-	AOZJ01	78	4868	4589	10/28/13	2/26/17	Contig	FDA	SAMN01805334	GCA_000487275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/275/GCA_000487275.1_ASM48727v1	24158624	818
Staphylococcus aureus WAMC6102	1409683	PRJNA224005	224005	Terrabacteria group	Firmicutes	3.02651	32.7	-	JBGY01	43	3195	3011	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381744	GCA_000542435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/435/GCA_000542435.1_Stap_aure_WAMC6102_V1	-	WAMC6102
Staphylococcus aureus OCMM6114	1409684	PRJNA224006	224006	Terrabacteria group	Firmicutes	2.82538	32.9	-	JBGX01	26	2927	2782	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381745	GCA_000542455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/455/GCA_000542455.1_Stap_aure_OCMM6114_V1	-	OCMM6114
Salmonella enterica subsp. enterica serovar Braenderup str. ATCC BAA-664	930771	PRJNA60515	60515	Proteobacteria	Gammaproteobacteria	4.71186	52.1	-	AOZM01	75	4772	4519	10/28/13	2/26/17	Contig	FDA	SAMN01823710	GCA_000487335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/335/GCA_000487335.1_ASM48733v1	24158624	ATCC BAA-664
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.63405	30.5	-	NFNF01	51	1721	1621	6/8/17	6/10/17	Contig	Swansea University	SAMN06888342	GCA_002179085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/085/GCA_002179085.1_ASM217908v1	28493321	isolate_W29
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.02427	37.9	-	MDMW01	31	3075	2979	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410684	GCA_001712155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/155/GCA_001712155.1_ASM171215v1	-	Lm115
Mycobacterium tuberculosis M2020	1448746	PRJNA235758	235758	Terrabacteria group	Actinobacteria	4.42034	65.6	-	JKKZ01	64	4327	4145	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599092	GCA_000664205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/205/GCA_000664205.1_Myco_tube_M2020_V1	-	M2020
Escherichia coli HVH 43 (4-2173468)	1280993	PRJNA186075	186075	Proteobacteria	Gammaproteobacteria	5.3284	50.5	-	AVUG01	8	5416	5107	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885705	GCA_000456685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/685/GCA_000456685.1_Esch_coli_HVH_43_4-2173468_V1	-	HVH 43 (4-2173468)
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.11998	39.8	-	CNAI01	96	2292	1997	3/23/15	3/11/17	Contig	SC	SAMEA1022886	GCA_001121065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/065/GCA_001121065.1_6930_7_16	-	216
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.849	66	-	LLLU01	128	6705	6333	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128503	GCA_001449465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/465/GCA_001449465.1_WH-SGI-V-07165	26604259	WH-SGI-V-07165
Acinetobacter baumannii TYTH-7	1100847	PRJNA74565	74565	Proteobacteria	Gammaproteobacteria	3.68229	38.8	-	AGSV01	157	3466	3323	11/4/14	3/16/17	Contig	National Tsing Hua University	SAMN03160862	GCA_000770805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/805/GCA_000770805.1_ASM77080v1	-	TYTH-7
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.08981	35.5	-	CPZV01	32	2160	2041	3/22/15	3/17/17	Scaffold	SC	SAMEA1031474	GCA_001159365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/365/GCA_001159365.1_6630_5_14	-	DK-NI-011
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03723	41.2	-	CDSO01	53	2019	1925	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233761	GCA_000945255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/255/GCA_000945255.1_Velvet_assembly	-	B21L
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.7166	50.5	-	FTWF01	411	5320	4468	1/28/17	2/26/17	Scaffold	SC	SAMEA2054655	GCA_900158615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/615/GCA_900158615.1_9803_4_61	-	2090STDY5461879
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.20969	28.6	-	FUOJ01	49	3979	3796	2/14/17	2/23/17	Scaffold	SC	SAMEA3375020	GCA_900164845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/845/GCA_900164845.1_16852_2_48	-	VRECD0054
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.3718	57.4	-	CCIB01	89	5486	5164	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602978	GCA_000822805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/805/GCA_000822805.1_84RE	-	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.79727	64.2	-	FVJV01	6	4819	4698	3/10/17	3/18/17	Scaffold	SC	SAMEA2275844	GCA_900134685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/685/GCA_900134685.1_12163_2_78	-	1118
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.0481	64.2	-	FSFI01	43	5041	4897	12/14/16	3/21/17	Scaffold	SC	SAMEA2071551	GCA_900134715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/715/GCA_900134715.1_10208_3_11	-	436
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.3511	57.4	-	CCIE01	163	5473	5131	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602979	GCA_000822825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/825/GCA_000822825.1_85RE	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.22577	28.4	-	FUOG01	34	3955	3799	2/14/17	2/23/17	Scaffold	SC	SAMEA3375038	GCA_900164855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/855/GCA_900164855.1_16852_2_66	-	VRECD0074
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.62068	50.8	-	FTWL01	393	5195	4413	1/28/17	2/26/17	Scaffold	SC	SAMEA2054656	GCA_900158625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/625/GCA_900158625.1_9803_4_62	-	2090STDY5461880
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.06498	41.1	-	CDUD01	56	2057	1961	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233816	GCA_000945275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/275/GCA_000945275.1_Velvet_assembly	-	E10N
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.1813	35.4	-	CPWV01	18	2241	2113	3/22/15	3/17/17	Scaffold	SC	SAMEA1031469	GCA_001160905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/905/GCA_001160905.1_6630_7_20	-	IT-NI-036
Acinetobacter baumannii TYTH-2	1100842	PRJNA74555	74555	Proteobacteria	Gammaproteobacteria	3.87985	38.9	-	AGSQ01	138	3726	3600	11/4/14	3/16/17	Contig	National Tsing Hua University	SAMN03160860	GCA_000770815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/815/GCA_000770815.1_ASM77081v1	-	TYTH-2
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.96133	65.8	-	LLLX01	105	6664	6406	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128506	GCA_001449515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/515/GCA_001449515.1_WH-SGI-V-07168	26604259	WH-SGI-V-07168
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.09483	39.7	-	CKOU01	59	2282	2054	3/21/15	3/11/17	Contig	SC	SAMEA1024832	GCA_001121085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/085/GCA_001121085.1_6680_4_19	-	6B
Escherichia coli HVH 44 (4-2298570)	1280994	PRJNA186079	186079	Proteobacteria	Gammaproteobacteria	5.23348	50.6	-	AVUH01	8	5271	4949	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885706	GCA_000456705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/705/GCA_000456705.1_Esch_coli_HVH_44_4-2298570_V1	-	HVH 44 (4-2298570)
Mycobacterium tuberculosis M2021	1448747	PRJNA235759	235759	Terrabacteria group	Actinobacteria	4.4222	65.6	-	JKKY01	72	4327	4113	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599093	GCA_000664225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/225/GCA_000664225.1_Myco_tube_M2021_V1	-	M2021
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.09932	37.8	-	MDNE01	20	3199	3112	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410809	GCA_001712185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/185/GCA_001712185.1_ASM171218v1	-	A559
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.55033	30.7	-	NFNQ01	309	1690	1495	6/8/17	6/10/17	Contig	Swansea University	SAMN06888331	GCA_002179115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/115/GCA_002179115.1_ASM217911v1	28493321	isolate_W17
Salmonella enterica subsp. enterica serovar Bareilly str. ATCC 9115	1124925	PRJNA78393	78393	Proteobacteria	Gammaproteobacteria	4.71374	52.2	-	AOZN01	46	4806	4547	10/28/13	2/26/17	Contig	FDA	SAMN01823704	GCA_000487355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/355/GCA_000487355.1_ASM48735v1	24158624	ATCC 9115
Staphylococcus aureus UCIM6123	1409688	PRJNA224010	224010	Terrabacteria group	Firmicutes	2.7401	32.8	-	JBGV01	16	2835	2680	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381749	GCA_000542475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/475/GCA_000542475.1_Stap_aure_UCIM6123_V1	-	UCIM6123
Staphylococcus aureus OCMM6117	1409690	PRJNA224012	224012	Terrabacteria group	Firmicutes	2.87811	32.8	-	JBGT01	15	2991	2819	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381751	GCA_000542495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/495/GCA_000542495.1_Stap_aure_OCMM6117_V1	-	OCMM6117
Salmonella enterica subsp. enterica serovar Berta str. ATCC 8392	1124926	PRJNA78383	78383	Proteobacteria	Gammaproteobacteria	4.72513	52.3	-	AOZO01	66	4801	4418	10/28/13	2/26/17	Contig	FDA	SAMN01823709	GCA_000487375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/375/GCA_000487375.1_ASM48737v1	24158624	ATCC 8392
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.6982	30.3	-	NFNV01	88	1787	1647	6/8/17	6/10/17	Contig	Swansea University	SAMN06888326	GCA_002179125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/125/GCA_002179125.1_ASM217912v1	28493321	isolate_W12
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.9696	37.9	-	MDNF01	20	3039	2950	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410787	GCA_001712195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/195/GCA_001712195.1_ASM171219v1	-	A557
Mycobacterium tuberculosis M2032	1448748	PRJNA235760	235760	Terrabacteria group	Actinobacteria	4.42633	65.6	-	JKKX01	74	4326	4105	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599094	GCA_000664245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/245/GCA_000664245.1_Myco_tube_M2032_V1	-	M2032
Escherichia coli HVH 45 (4-3129918)	1280995	PRJNA186080	186080	Proteobacteria	Gammaproteobacteria	5.57014	50.7	-	AVUI01	11	5834	5503	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885707	GCA_000456725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/725/GCA_000456725.1_Esch_coli_HVH_45_4-3129918_V1	-	HVH 45 (4-3129918)
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.06609	39.5	-	CMCX01	62	2260	2028	3/21/15	3/11/17	Contig	SC	SAMEA1029343	GCA_001121105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/105/GCA_001121105.1_7004_8_93	-	SMRU2925
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.36123	65.7	-	LLLY01	263	7250	6933	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128507	GCA_001449545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/545/GCA_001449545.1_WH-SGI-V-07169	26604259	WH-SGI-V-07169
Acinetobacter baumannii TYTH-3	1100843	PRJNA74557	74557	Proteobacteria	Gammaproteobacteria	3.71917	38.9	-	AGSR01	180	3558	3440	11/4/14	3/16/17	Contig	National Tsing Hua University	SAMN03160863	GCA_000770865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/865/GCA_000770865.1_ASM77086v1	-	TYTH-3
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.04362	35.2	-	CQCN01	15	2088	1976	3/22/15	3/17/17	Scaffold	SC	SAMEA1031453	GCA_001162145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/145/GCA_001162145.1_6630_7_1	-	DE-NI-033
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.08875	41.2	-	CDTT01	56	2093	1997	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233806	GCA_000945295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/295/GCA_000945295.1_Velvet_assembly	-	E00F
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.74543	50.6	-	FTWK01	499	5359	4524	1/28/17	2/26/17	Scaffold	SC	SAMEA2054681	GCA_900158655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/655/GCA_900158655.1_9803_4_65	-	2090STDY5461883
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.32044	28.3	-	FUOH01	33	4137	3937	2/14/17	2/23/17	Scaffold	SC	SAMEA3375037	GCA_900164865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/865/GCA_900164865.1_16852_2_65	-	VRECD0073
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.75174	57.1	-	CCIF01	242	6026	5641	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602980	GCA_000822845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/845/GCA_000822845.1_86SGR	-	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.14184	64	-	FVKH01	59	5151	4988	3/10/17	3/18/17	Scaffold	SC	SAMEA2070895	GCA_900134765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/765/GCA_900134765.1_10208_3_18	-	443
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.13336	64.1	-	FSFM01	16	5160	5056	12/14/16	3/21/17	Scaffold	SC	SAMEA2069143	GCA_900134855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/855/GCA_900134855.1_10208_3_31	-	456
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.7622	57.1	-	CCIH01	228	6039	5633	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602981	GCA_000822865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/865/GCA_000822865.1_87SGR	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.32915	28.4	-	FUOK01	43	4069	3923	2/14/17	2/23/17	Scaffold	SC	SAMEA3375039	GCA_900164875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/875/GCA_900164875.1_16852_2_67	-	VRECD0075
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.47456	50.8	-	FTWO01	374	4973	4246	1/28/17	2/26/17	Scaffold	SC	SAMEA2059490	GCA_900158685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/685/GCA_900158685.1_9803_4_68	-	2090STDY5488116
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05818	41.1	-	CDWP01	60	2046	1952	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233842	GCA_000945335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/335/GCA_000945335.1_Velvet_assembly	-	F1L
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.09925	35.3	-	CQAV01	31	2162	2026	3/22/15	3/17/17	Scaffold	SC	SAMEA1031434	GCA_001162445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/445/GCA_001162445.1_6630_6_24	-	DE-NI-032
Acinetobacter baumannii TYTH-4	1100844	PRJNA74559	74559	Proteobacteria	Gammaproteobacteria	3.93877	38.8	-	AGSS01	163	3789	3669	11/4/14	3/16/17	Contig	National Tsing Hua University	SAMN03160861	GCA_000770885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/885/GCA_000770885.1_ASM77088v1	-	TYTH-4
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.01891	65.8	-	LLMA01	95	6736	6482	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128509	GCA_001449555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/555/GCA_001449555.1_WH-SGI-V-07171	26604259	WH-SGI-V-07171
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11501	39.6	-	CKCA01	71	2354	2111	3/21/15	3/11/17	Contig	SC	SAMEA1024145	GCA_001121165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/165/GCA_001121165.1_6593_4_13	-	4
Escherichia coli HVH 46 (4-2758776)	1280996	PRJNA186081	186081	Proteobacteria	Gammaproteobacteria	5.25758	50.4	-	AVUJ01	18	5423	5093	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885708	GCA_000456745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/745/GCA_000456745.1_Esch_coli_HVH_46_4-2758776_V1	-	HVH 46 (4-2758776)
Mycobacterium tuberculosis M2085	1448750	PRJNA235762	235762	Terrabacteria group	Actinobacteria	4.3958	65.6	-	JKKV01	83	4324	4112	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599096	GCA_000664265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/265/GCA_000664265.1_Myco_tube_M2085_V1	-	M2085
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.02258	37.8	-	MDMV01	22	3057	2974	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410685	GCA_001712205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/205/GCA_001712205.1_ASM171220v1	-	Lm116
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.63627	30.4	-	NFNZ01	53	1722	1621	6/8/17	6/10/17	Contig	Swansea University	SAMN06888322	GCA_002179155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/155/GCA_002179155.1_ASM217915v1	28493321	isolate_U3
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000200	1173468	PRJNA159361	159361	Proteobacteria	Gammaproteobacteria	4.68949	52.3	-	AOZQ01	49	4770	4532	10/28/13	2/26/17	Contig	FDA	SAMN01823703	GCA_000487415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/415/GCA_000487415.1_ASM48741v1	24158624	CFSAN000200
Staphylococcus aureus GGMC6026	1409691	PRJNA224013	224013	Terrabacteria group	Firmicutes	2.93431	32.8	-	JBGS01	20	3080	2908	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381752	GCA_000542515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/515/GCA_000542515.1_Stap_aure_GGMC6026_V1	-	GGMC6026
Staphylococcus aureus MISS6078	1409692	PRJNA224014	224014	Terrabacteria group	Firmicutes	2.87955	32.9	-	JBGR01	16	3031	2870	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381753	GCA_000542535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/535/GCA_000542535.1_Stap_aure_MISS6078_V1	-	MISS6078
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000197	1173467	PRJNA159359	159359	Proteobacteria	Gammaproteobacteria	4.67435	52.3	-	AOZR01	141	4813	4483	10/28/13	2/26/17	Contig	FDA	SAMN01823702	GCA_000487435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/435/GCA_000487435.1_ASM48743v1	24158624	CFSAN000197
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.62735	30.3	-	NFOB01	56	1688	1576	6/8/17	6/10/17	Contig	Swansea University	SAMN06888320	GCA_002179195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/195/GCA_002179195.1_ASM217919v1	28493321	isolate_U1
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.04855	37.8	-	MDMY01	23	3128	3044	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410745	GCA_001712215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/215/GCA_001712215.1_ASM171221v1	-	A9
Mycobacterium tuberculosis M2086	1448751	PRJNA235763	235763	Terrabacteria group	Actinobacteria	4.39938	65.6	-	JKKU01	81	4332	4109	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599097	GCA_000664285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/285/GCA_000664285.1_Myco_tube_M2086_V1	-	M2086
Escherichia coli HVH 48 (4-2658593)	1280997	PRJNA186082	186082	Proteobacteria	Gammaproteobacteria	5.14503	50.6	-	AVUK01	6	5326	5005	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885709	GCA_000456765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/765/GCA_000456765.1_Esch_coli_HVH_48_4-2658593_V1	-	HVH 48 (4-2658593)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0586	39.6	-	CNPM02	184	2217	1989	3/22/15	3/11/17	Contig	SC	SAMEA1032424	GCA_001121245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/245/GCA_001121245.2_6930_8_17	-	R34-3023
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.09116	65.8	-	LLMB01	104	6862	6600	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128510	GCA_001449585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/585/GCA_001449585.1_WH-SGI-V-07172	26604259	WH-SGI-V-07172
Acinetobacter baumannii TYTH-6	1100846	PRJNA74563	74563	Proteobacteria	Gammaproteobacteria	3.94416	38.8	-	AGSU01	137	3795	3675	11/4/14	3/16/17	Contig	National Tsing Hua University	SAMN03160859	GCA_000770905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/905/GCA_000770905.1_ASM77090v1	-	TYTH-6
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.05744	35.3	-	CQCS01	30	2080	1968	3/22/15	3/17/17	Scaffold	SC	SAMEA1031472	GCA_001163105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/105/GCA_001163105.1_6630_5_5	-	DK-NI-001
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.06994	41.2	-	CDUG01	55	2068	1974	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233823	GCA_000945375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/375/GCA_000945375.1_Velvet_assembly	-	E21V
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.53395	50.8	-	FTWP01	380	5081	4308	1/28/17	2/26/17	Scaffold	SC	SAMEA2055574	GCA_900158705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/705/GCA_900158705.1_9803_4_70	-	2090STDY5488118
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.17447	28.9	-	FUOM01	44	3977	3767	2/14/17	2/23/17	Scaffold	SC	SAMEA3375043	GCA_900164885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/885/GCA_900164885.1_16852_2_71	-	VRECD0080
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.76596	57.1	-	CCIG01	152	6008	5655	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602982	GCA_000822885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/885/GCA_000822885.1_88SGR	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.20335	64	-	FSFQ01	22	5249	5118	12/14/16	3/21/17	Scaffold	SC	SAMEA2070901	GCA_900134945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/945/GCA_900134945.1_10208_3_36	-	461
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.22973	64	-	FVKN01	45	5266	5158	3/10/17	3/18/17	Scaffold	SC	SAMEA2071546	GCA_900135045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/045/GCA_900135045.1_10250_1_81	-	421
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.76182	57.1	-	CCII01	237	6033	5655	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602983	GCA_000822905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/905/GCA_000822905.1_89SGR	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.32012	28.3	-	FUOL01	56	4094	3865	2/14/17	2/23/17	Scaffold	SC	SAMEA3375041	GCA_900164895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/895/GCA_900164895.1_16852_2_69	-	VRECD0077
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.47249	50.8	-	FTWW01	372	5008	4248	1/28/17	2/26/17	Scaffold	SC	SAMEA2059492	GCA_900158745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/745/GCA_900158745.1_9803_4_74	-	2090STDY5488122
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.00526	41.2	-	CDTD01	62	2002	1894	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233783	GCA_000945395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/395/GCA_000945395.1_Velvet_assembly	-	B35F
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.14701	35.5	-	CPYH01	22	2217	2104	3/23/15	3/17/17	Scaffold	SC	SAMEA1031496	GCA_001164665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/665/GCA_001164665.1_6630_8_9	-	CZ-NI-014
Acinetobacter baumannii	470	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.81654	38.9	-	BBOR01	42	3629	3514	11/8/14	3/16/17	Contig	National Institute of Technology and Evaluation	SAMD00020334	GCA_000775835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/835/GCA_000775835.1_ASM77583v1	-	NBRC 110495
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.25557	65.6	-	LLMD01	137	7056	6780	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128512	GCA_001449605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/605/GCA_001449605.1_WH-SGI-V-07174	26604259	WH-SGI-V-07174
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10203	39.6	-	CLID01	54	2316	2097	3/21/15	3/11/17	Contig	SC	SAMEA1025779	GCA_001121285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/285/GCA_001121285.1_6925_6_18	-	SMRU2202
Escherichia coli HVH 51 (4-2172526)	1280999	PRJNA186084	186084	Proteobacteria	Gammaproteobacteria	5.15847	50.5	-	AVUL01	10	5278	4931	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885711	GCA_000456785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/785/GCA_000456785.1_Esch_coli_HVH_51_4-2172526_V1	-	HVH 51 (4-2172526)
Mycobacterium tuberculosis M2113	1448752	PRJNA235764	235764	Terrabacteria group	Actinobacteria	4.41503	65.6	-	JKKT01	63	4335	4142	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599098	GCA_000664305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/305/GCA_000664305.1_Myco_tube_M2113_V1	-	M2113
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.02132	37.7	-	MDMU01	16	3088	3003	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410686	GCA_001712265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/265/GCA_001712265.1_ASM171226v1	-	Lm117
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.62308	30.5	-	NFOG01	200	1743	1590	6/8/17	6/10/17	Contig	Swansea University	SAMN06888315	GCA_002179215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/215/GCA_002179215.1_ASM217921v1	28493321	isolate_S2
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000183	1173463	PRJNA159351	159351	Proteobacteria	Gammaproteobacteria	4.59005	52.3	-	AOZT01	89	4646	4416	10/28/13	2/26/17	Contig	FDA	SAMN01823700	GCA_000487455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/455/GCA_000487455.1_ASM48745v1	24158624	CFSAN000183
Staphylococcus aureus OCMM6123	1409694	PRJNA224016	224016	Terrabacteria group	Firmicutes	2.84182	32.9	-	JBGP01	32	2959	2802	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381755	GCA_000542555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/555/GCA_000542555.1_Stap_aure_OCMM6123_V1	-	OCMM6123
Staphylococcus aureus MISS6080	1409696	PRJNA224018	224018	Terrabacteria group	Firmicutes	2.93135	32.8	-	JBGN01	27	3069	2900	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381757	GCA_000542575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/575/GCA_000542575.1_Stap_aure_MISS6080_V1	-	MISS6080
Salmonella enterica subsp. enterica serovar Agona str. 648586-1	1124923	PRJNA78471	78471	Proteobacteria	Gammaproteobacteria	4.79399	52	-	AOZU01	67	4885	4610	10/28/13	2/26/17	Contig	FDA	SAMN01813430	GCA_000487475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/475/GCA_000487475.1_ASM48747v1	24158624	648586-1
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.64177	30.5	-	NFOI01	73	1705	1609	6/8/17	6/10/17	Contig	Swansea University	SAMN06888313	GCA_002179235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/235/GCA_002179235.1_ASM217923v1	28493321	isolate_H9
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.05433	37.9	-	MDMZ01	21	3133	3047	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410794	GCA_001712275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/275/GCA_001712275.1_ASM171227v1	-	A60
Mycobacterium tuberculosis M2116	1448753	PRJNA235765	235765	Terrabacteria group	Actinobacteria	4.42308	65.6	-	JKKS01	75	4321	4110	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599099	GCA_000664325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/325/GCA_000664325.1_Myco_tube_M2116_V1	-	M2116
Escherichia coli HVH 53 (4-0631051)	1281000	PRJNA186085	186085	Proteobacteria	Gammaproteobacteria	5.40058	50.5	-	AVUM01	11	5471	5053	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885712	GCA_000456805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/805/GCA_000456805.1_Esch_coli_HVH_53_4-0631051_V1	-	HVH 53 (4-0631051)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00793	39.7	-	CNNK02	130	2180	1971	3/23/15	3/5/17	Contig	SC	SAMEA1032449	GCA_001121345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/345/GCA_001121345.2_6925_1_52	-	R34-3033
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.76171	66	-	LLMG01	180	6431	6189	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128515	GCA_001449645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/645/GCA_001449645.1_WH-SGI-V-07177	26604259	WH-SGI-V-07177
Acinetobacter baumannii	470	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.81397	38.9	-	BBOQ01	47	3630	3519	11/8/14	3/16/17	Contig	National Institute of Technology and Evaluation	SAMD00020339	GCA_000775855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/855/GCA_000775855.1_ASM77585v1	-	NBRC 110493
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.03098	35.2	-	CQEW01	31	2078	1965	3/23/15	3/17/17	Scaffold	SC	SAMEA1031530	GCA_001166505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/505/GCA_001166505.1_6630_6_22	-	DE-NI-0019
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.0646	41.1	-	CDVU01	63	2055	1955	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233799	GCA_000945435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/435/GCA_000945435.1_Velvet_assembly	-	B46P
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.52271	50.8	-	FTWV01	365	5013	4311	1/28/17	2/26/17	Scaffold	SC	SAMEA2056890	GCA_900158755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/755/GCA_900158755.1_9803_4_75	-	2090STDY5488123
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.17439	28.4	-	FUON01	24	3918	3739	2/14/17	2/23/17	Scaffold	SC	SAMEA3375044	GCA_900164905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/905/GCA_900164905.1_16852_2_72	-	VRECD0081
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.75577	57.1	-	CCIJ01	216	6018	5639	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602984	GCA_000822925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/925/GCA_000822925.1_90SGR	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.24681	64	-	FSFZ01	49	5294	5182	12/14/16	3/21/17	Scaffold	SC	SAMEA2070793	GCA_900135095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/095/GCA_900135095.1_10250_1_85	-	425
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.34909	64.1	-	FSGF01	28	5416	5224	12/14/16	3/21/17	Scaffold	SC	SAMEA2070594	GCA_900135145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/145/GCA_900135145.1_10625_4_24	-	24
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.41342	57.4	-	CCJB01	86	5426	5151	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602985	GCA_000822945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/945/GCA_000822945.1_91SGR	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.38715	28.3	-	FUOO01	43	4144	3961	2/14/17	2/23/17	Scaffold	SC	SAMEA3375045	GCA_900164915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/915/GCA_900164915.1_16852_2_73	-	VRECD0083
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.67146	50.7	-	FTWX01	371	5213	4454	1/28/17	2/26/17	Scaffold	SC	SAMEA2055576	GCA_900158765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/765/GCA_900158765.1_9803_4_76	-	2090STDY5488124
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.10034	41.1	-	CEBU01	82	2090	1973	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234067	GCA_000945475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/475/GCA_000945475.1_Velvet_assembly	-	S7S
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.05723	35.3	-	CQDX01	21	2095	2010	3/23/15	3/17/17	Scaffold	SC	SAMEA1031444	GCA_001173205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/205/GCA_001173205.1_6753_5_16	-	RBH05
Acinetobacter baumannii	470	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	4.0592	38.9	-	BBOP01	95	3938	3767	11/8/14	3/16/17	Contig	National Institute of Technology and Evaluation	SAMD00020335	GCA_000775875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/875/GCA_000775875.1_ASM77587v1	-	NBRC 110489
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.77678	66.1	-	LLMH01	121	6581	6335	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128516	GCA_001449655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/655/GCA_001449655.1_WH-SGI-V-07178	26604259	WH-SGI-V-07178
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.11893	39.7	-	CMVQ01	100	2261	1988	3/23/15	3/11/17	Contig	SC	SAMEA1969117	GCA_001121365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/365/GCA_001121365.1_5756_5_5	-	268
Escherichia coli HVH 55 (4-2646161)	1281002	PRJNA186087	186087	Proteobacteria	Gammaproteobacteria	5.30937	50.3	-	AVUN01	5	5399	5061	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885714	GCA_000456825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/825/GCA_000456825.1_Esch_coli_HVH_55_4-2646161_V1	-	HVH 55 (4-2646161)
Mycobacterium tuberculosis M2128	1448754	PRJNA235766	235766	Terrabacteria group	Actinobacteria	4.42472	65.6	-	JKKR01	70	4327	4116	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599100	GCA_000664345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/345/GCA_000664345.1_Myco_tube_M2128_V1	-	M2128
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.94944	37.9	-	MDND01	20	3008	2935	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410785	GCA_001712295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/295/GCA_001712295.1_ASM171229v1	-	A560
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.62225	30.4	-	NFOQ01	79	1695	1580	6/8/17	6/10/17	Contig	Swansea University	SAMN06888305	GCA_002179245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/245/GCA_002179245.1_ASM217924v1	28493321	isolate_H32
Salmonella enterica subsp. enterica serovar Agona str. 419639 2-1	1124921	PRJNA78467	78467	Proteobacteria	Gammaproteobacteria	4.82031	51.9	-	AOZV01	52	4909	4652	10/28/13	2/26/17	Contig	FDA	SAMN01813429	GCA_000487495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/495/GCA_000487495.1_ASM48749v1	24158624	419639 2-1
Staphylococcus aureus WMCA6092	1409699	PRJNA224021	224021	Terrabacteria group	Firmicutes	2.8998	32.7	-	JBGK01	9	3057	2896	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381760	GCA_000542595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/595/GCA_000542595.1_Stap_aure_WMCA6092_V1	-	WMCA6092
Staphylococcus aureus SCLE6040	1409700	PRJNA224022	224022	Terrabacteria group	Firmicutes	2.9173	32.9	-	JBGJ01	23	3072	2905	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381761	GCA_000542615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/615/GCA_000542615.1_Stap_aure_SCLE6040_V1	-	SCLE6040
Salmonella enterica subsp. enterica serovar Agona str. ATCC 51957	935702	PRJNA61145	61145	Proteobacteria	Gammaproteobacteria	4.70878	52.1	-	AOZX01	64	4772	4463	10/28/13	2/26/17	Contig	FDA	SAMN01823706	GCA_000487535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/535/GCA_000487535.1_ASM48753v1	24158624	ATCC 51957
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.7453	30.4	-	NFOM01	83	1870	1771	6/8/17	6/10/17	Contig	Swansea University	SAMN06888309	GCA_002179265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/265/GCA_002179265.1_ASM217926v1	28493321	isolate_H4
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.0216	37.9	-	MDNC01	22	3078	2996	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410767	GCA_001712305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/305/GCA_001712305.1_ASM171230v1	-	A57
Mycobacterium tuberculosis M2129	1448755	PRJNA235767	235767	Terrabacteria group	Actinobacteria	4.42567	65.6	-	JKKQ01	71	4324	4108	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599101	GCA_000664365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/365/GCA_000664365.1_Myco_tube_M2129_V1	-	M2129
Escherichia coli HVH 56 (4-2153033)	1281003	PRJNA186088	186088	Proteobacteria	Gammaproteobacteria	5.01882	50.4	-	AVUO01	9	5015	4694	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885715	GCA_000456845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/845/GCA_000456845.1_Esch_coli_HVH_56_4-2153033_V1	-	HVH 56 (4-2153033)
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.19622	39.5	-	CLYO01	57	2459	2203	3/21/15	3/11/17	Contig	SC	SAMEA1028719	GCA_001121385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/385/GCA_001121385.1_6983_7_56	-	SMRU2360
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.87166	66	-	LLML01	146	6724	6477	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128520	GCA_001449725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/725/GCA_001449725.1_WH-SGI-V-07181	26604259	WH-SGI-V-07181
Acinetobacter baumannii	470	PRJNA257769	257769	Proteobacteria	Gammaproteobacteria	4.42834	38.8	-	JQNV01	254	4312	4054	11/25/14	3/16/17	Contig	University of Malaya	SAMN02978823	GCA_000787015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/015/GCA_000787015.1_ASM78701v1	-	269
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.05817	35.3	-	CPXY01	17	2123	2008	3/23/15	3/17/17	Scaffold	SC	SAMEA1031446	GCA_001174785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/785/GCA_001174785.1_6630_7_15	-	IT-NI-028
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05139	41.2	-	CDVE01	119	2050	1933	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233852	GCA_000945575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/575/GCA_000945575.1_Velvet_assembly	-	F43B
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.47715	50.8	-	FTWY01	364	4993	4240	1/28/17	3/2/17	Scaffold	SC	SAMEA2059493	GCA_900158775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/775/GCA_900158775.1_9803_4_77	-	2090STDY5488125
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.19588	28.7	-	FUOP01	32	3954	3764	2/14/17	2/23/17	Scaffold	SC	SAMEA3375047	GCA_900164925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/925/GCA_900164925.1_16852_2_75	-	VRECD0086
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.80954	56.8	-	CCIK01	127	5949	5596	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602986	GCA_000822965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/965/GCA_000822965.1_92SGR	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.60669	64	-	FSGH01	51	5785	5541	12/14/16	3/21/17	Scaffold	SC	SAMEA2071185	GCA_900135165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/165/GCA_900135165.1_10625_4_34	-	34
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.6084	64	-	FVLA01	46	5796	5544	3/10/17	3/18/17	Scaffold	SC	SAMEA2070596	GCA_900135205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/205/GCA_900135205.1_10625_4_33	-	33
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.43803	57.4	-	CCJC01	89	5394	5132	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602987	GCA_000822985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/985/GCA_000822985.1_93SGR	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.38924	28.3	-	FUOQ01	46	4143	3968	2/14/17	2/23/17	Scaffold	SC	SAMEA3375046	GCA_900164935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/935/GCA_900164935.1_16852_2_74	-	VRECD0084
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.77403	50.6	-	FTXA01	385	5374	4591	1/28/17	2/26/17	Scaffold	SC	SAMEA2056891	GCA_900158785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/785/GCA_900158785.1_9803_4_78	-	2090STDY5488126
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.08293	41.2	-	CEBI01	59	2094	1996	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234123	GCA_000945635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/635/GCA_000945635.1_Velvet_assembly	-	V38Y
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.15549	35.5	-	CTKT01	37	2250	2120	3/26/15	3/18/17	Scaffold	SC	SAMEA1031431	GCA_001217725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/725/GCA_001217725.1_6630_8_13	-	GB-NI-002
Acinetobacter baumannii	470	PRJNA255196	255196	Proteobacteria	Gammaproteobacteria	3.95163	38.9	-	JPLH01	35	3809	3679	11/26/14	3/16/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN02911265	GCA_000787215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/215/GCA_000787215.1_ASM78721v1	-	BJ3
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.46578	66.3	-	LLMO01	72	6135	5973	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128523	GCA_001449735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/735/GCA_001449735.1_WH-SGI-V-07184	26604259	WH-SGI-V-07184
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.04646	39.7	-	CMDV01	66	2238	2004	3/21/15	3/11/17	Contig	SC	SAMEA1028789	GCA_001121405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/405/GCA_001121405.1_7011_4_13	-	SMRU2773
Escherichia coli HVH 58 (4-2839709)	1281004	PRJNA186089	186089	Proteobacteria	Gammaproteobacteria	5.23107	50.4	-	AVUP01	6	5375	5013	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885716	GCA_000456865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/865/GCA_000456865.1_Esch_coli_HVH_58_4-2839709_V1	-	HVH 58 (4-2839709)
Mycobacterium tuberculosis M2131	1448756	PRJNA235768	235768	Terrabacteria group	Actinobacteria	4.38987	65.6	-	JKKP01	84	4327	4107	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599102	GCA_000664385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/385/GCA_000664385.1_Myco_tube_M2131_V1	-	M2131
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.88722	37.9	-	MDQJ01	16	2941	2866	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410832	GCA_001712345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/345/GCA_001712345.1_ASM171234v1	-	C4
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.66064	30.4	-	NFOP01	138	1763	1659	6/8/17	6/10/17	Contig	Swansea University	SAMN06888306	GCA_002179285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/285/GCA_002179285.1_ASM217928v1	28493321	isolate_H33
Salmonella enterica subsp. enterica serovar Agona str. 632182-2	1124919	PRJNA78463	78463	Proteobacteria	Gammaproteobacteria	4.73157	52.1	-	AOZY01	49	4835	4582	10/28/13	2/26/17	Contig	FDA	SAMN01813428	GCA_000487555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/555/GCA_000487555.1_ASM48755v1	24158624	632182-2
Staphylococcus aureus GGMC6027	1409702	PRJNA224024	224024	Terrabacteria group	Firmicutes	2.89706	32.7	-	JBGH01	9	3054	2887	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381763	GCA_000542635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/635/GCA_000542635.1_Stap_aure_GGMC6027_V1	-	GGMC6027
Staphylococcus aureus LAMC6115	1409703	PRJNA224025	224025	Terrabacteria group	Firmicutes	2.96131	32.6	-	JBGG01	15	3133	2968	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381764	GCA_000542655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/655/GCA_000542655.1_Stap_aure_LAMC6115_V1	-	LAMC6115
Salmonella enterica subsp. enterica serovar Anatum str. USDA 100	1124924	PRJNA78395	78395	Proteobacteria	Gammaproteobacteria	4.74333	52	-	APAA01	308	4831	4445	10/28/13	2/26/17	Contig	FDA	SAMN01805329	GCA_000487595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/595/GCA_000487595.1_ASM48759v1	24158624	USDA 100
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.53668	30.1	-	NFPE01	37	1615	1518	6/8/17	6/10/17	Contig	Swansea University	SAMN06888291	GCA_002179315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/315/GCA_002179315.1_ASM217931v1	28493321	isolate_H19
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.87423	37.9	-	MDPZ01	11	2920	2837	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410714	GCA_001712365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/365/GCA_001712365.1_ASM171236v1	-	Lm223
Mycobacterium tuberculosis M2130	1448757	PRJNA235769	235769	Terrabacteria group	Actinobacteria	4.39402	65.6	-	JKKO01	71	4313	4116	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599103	GCA_000664405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/405/GCA_000664405.1_Myco_tube_M2130_V1	-	M2130
Escherichia coli HVH 59 (4-1119338)	1281005	PRJNA186090	186090	Proteobacteria	Gammaproteobacteria	5.28905	50.7	-	AVUQ01	18	5492	5099	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885717	GCA_000456885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/885/GCA_000456885.1_Esch_coli_HVH_59_4-1119338_V1	-	HVH 59 (4-1119338)
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11893	39.7	-	CMPI01	74	2367	2135	3/22/15	3/11/17	Contig	SC	SAMEA2061720	GCA_001121445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/445/GCA_001121445.1_9803_7_53	-	19F
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.75476	66	-	LLMQ01	167	6428	6189	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128525	GCA_001449765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/765/GCA_001449765.1_WH-SGI-V-07186	26604259	WH-SGI-V-07186
Acinetobacter baumannii	470	PRJNA255196	255196	Proteobacteria	Gammaproteobacteria	3.97757	38.9	-	JPLF01	44	3863	3732	11/26/14	3/16/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN02911263	GCA_000787225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/225/GCA_000787225.1_ASM78722v1	-	BJ1
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.017	35.2	-	CTRF01	12	2084	1973	3/26/15	3/18/17	Scaffold	SC	SAMEA1031510	GCA_001218205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/205/GCA_001218205.1_6630_8_17	-	GB-NI-006
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04845	41.2	-	CDWB01	51	2038	1946	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233826	GCA_000945735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/735/GCA_000945735.1_Velvet_assembly	-	E30Y
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.72727	50.8	-	FTXC01	379	5302	4554	1/28/17	2/26/17	Scaffold	SC	SAMEA2059494	GCA_900158805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/805/GCA_900158805.1_9803_4_80	-	2090STDY5488128
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.41925	29.1	-	FUOR01	34	4195	4010	2/14/17	2/23/17	Scaffold	SC	SAMEA3375055	GCA_900164945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/945/GCA_900164945.1_16852_2_83	-	VRECD0100
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.60476	57.2	-	CCIL01	80	5658	5336	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602988	GCA_000823005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/005/GCA_000823005.1_94SGR	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.38246	64.1	-	FSGM01	482	5710	5161	12/14/16	4/2/17	Scaffold	SC	SAMEA2070164	GCA_900135275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/275/GCA_900135275.1_10625_4_41	-	41
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96991	64.3	-	FSGN01	31	4967	4822	12/14/16	3/21/17	Scaffold	SC	SAMEA2071188	GCA_900135295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/295/GCA_900135295.1_10625_4_43	-	43
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.484	57.1	-	CCIM01	84	5517	5239	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602989	GCA_000823025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/025/GCA_000823025.1_95SGR	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.16534	28.6	-	FUOS01	29	3898	3732	2/14/17	2/23/17	Scaffold	SC	SAMEA3375054	GCA_900164955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/955/GCA_900164955.1_16852_2_82	-	VRECD0099
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.52828	50.8	-	FTXE01	373	5091	4311	1/28/17	2/26/17	Scaffold	SC	SAMEA2059495	GCA_900158835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/835/GCA_900158835.1_9803_4_83	-	2090STDY5488131
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.0642	41.1	-	CECH01	60	2057	1955	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234104	GCA_000945815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/815/GCA_000945815.1_Velvet_assembly	-	V27D
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.10443	35.3	-	CTIW01	16	2163	2047	3/26/15	3/18/17	Scaffold	SC	SAMEA1031497	GCA_001218945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/945/GCA_001218945.1_6630_8_20	-	GB-NI-010
Acinetobacter baumannii	470	PRJNA255196	255196	Proteobacteria	Gammaproteobacteria	4.01542	38.9	-	JPLG01	52	3908	3774	11/26/14	3/16/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN02911264	GCA_000787235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/235/GCA_000787235.1_ASM78723v1	-	BJ2
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.32097	66.5	-	LLMR01	67	5963	5792	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128526	GCA_001449785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/785/GCA_001449785.1_WH-SGI-V-07187	26604259	WH-SGI-V-07187
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	1.98049	39.6	-	CKVH01	51	2169	1966	3/21/15	3/11/17	Contig	SC	SAMEA1026239	GCA_001121505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/505/GCA_001121505.1_6823_3_8	-	SMRU1904
Escherichia coli HVH 61 (4-2736020)	1281006	PRJNA186091	186091	Proteobacteria	Gammaproteobacteria	5.22204	50.5	-	AVUR01	8	5367	5017	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885718	GCA_000456905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/905/GCA_000456905.1_Esch_coli_HVH_61_4-2736020_V1	-	HVH 61 (4-2736020)
Mycobacterium tuberculosis M2132	1448758	PRJNA235770	235770	Terrabacteria group	Actinobacteria	4.39891	65.6	-	JKKN01	65	4308	4110	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599104	GCA_000664425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/425/GCA_000664425.1_Myco_tube_M2132_V1	-	M2132
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.92032	37.9	-	MDQA01	23	2956	2874	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410713	GCA_001712375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/375/GCA_001712375.1_ASM171237v1	-	Lm222
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.86916	30.1	-	NFPQ01	119	1995	1839	6/8/17	6/10/17	Contig	Swansea University	SAMN06888279	GCA_002179345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/345/GCA_002179345.1_ASM217934v1	28493321	isolate_C8
"Salmonella enterica subsp. diarizonae serovar 60:r:e,n,x,z15 str. 01-0170"	1173780	PRJNA161287	161287	Proteobacteria	Gammaproteobacteria	5.2889	51.3	-	APAC01	108	5310	4894	10/28/13	2/27/17	Contig	FDA	SAMN00990751	GCA_000487635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/635/GCA_000487635.2_ASM48763v2	24158624	01-0170
Staphylococcus aureus OCMM6124	1409704	PRJNA224026	224026	Terrabacteria group	Firmicutes	2.8745	32.8	-	JBGF01	23	3067	2900	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381765	GCA_000542675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/675/GCA_000542675.1_Stap_aure_OCMM6124_V1	-	OCMM6124
Staphylococcus aureus PLAC6043	1409708	PRJNA224030	224030	Terrabacteria group	Firmicutes	2.93251	32.7	-	JBGD01	14	3096	2925	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381769	GCA_000542695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/695/GCA_000542695.1_Stap_aure_PLAC6043_V1	-	PLAC6043
Salmonella enterica subsp. enterica serovar Nchanga str. CFSAN001092	1196830	PRJNA168128	168128	Proteobacteria	Gammaproteobacteria	4.72747	52.4	-	APAD01	665	4884	4560	10/28/13	2/26/17	Contig	FDA	SAMN01813435	GCA_000487655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/655/GCA_000487655.1_ASM48765v1	24158624	CFSAN001092
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.64367	30.6	-	NFPK01	298	1813	1631	6/8/17	6/10/17	Contig	Swansea University	SAMN06888285	GCA_002179375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/375/GCA_002179375.1_ASM217937v1	28493321	isolate_H12
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	3.05432	37.9	-	MDNA01	21	3131	3045	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410837	GCA_001712405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/405/GCA_001712405.1_ASM171240v1	-	A59
Mycobacterium tuberculosis M2134	1448759	PRJNA235771	235771	Terrabacteria group	Actinobacteria	4.43271	65.6	-	JKKM01	74	4333	4120	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599105	GCA_000664445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/445/GCA_000664445.1_Myco_tube_M2134_V1	-	M2134
Escherichia coli HVH 63 (4-2542528)	1281007	PRJNA186092	186092	Proteobacteria	Gammaproteobacteria	5.38856	50.7	-	AVUS01	12	5605	5287	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885719	GCA_000456925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/925/GCA_000456925.1_Esch_coli_HVH_63_4-2542528_V1	-	HVH 63 (4-2542528)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08703	39.7	-	CNYT02	174	2302	2099	3/22/15	3/11/17	Contig	SC	SAMEA1463181	GCA_001121525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/525/GCA_001121525.2_7553_4_38	-	NP7029
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.73138	66.2	-	LLMS01	88	6496	6311	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128527	GCA_001449805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/805/GCA_001449805.1_WH-SGI-V-07188	26604259	WH-SGI-V-07188
Acinetobacter baumannii	470	PRJNA255196	255196	Proteobacteria	Gammaproteobacteria	3.9623	38.9	-	JPLI01	54	3800	3586	11/26/14	3/16/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN02911266	GCA_000787275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/275/GCA_000787275.1_ASM78727v1	-	BJ4
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.13871	35.5	-	CTJD01	34	2225	2099	3/26/15	3/18/17	Scaffold	SC	SAMEA1031468	GCA_001221465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/465/GCA_001221465.1_6630_8_23	-	GB-NI-015
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.1155	41	-	CDSS01	180	2084	1971	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233769	GCA_000945855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/855/GCA_000945855.1_Velvet_assembly	-	B24O
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.46914	50.8	-	FTXF01	367	5009	4229	1/28/17	2/26/17	Scaffold	SC	SAMEA2056892	GCA_900158845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/845/GCA_900158845.1_9803_4_84	-	2090STDY5488132
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.27424	28.8	-	FUOU01	28	4022	3824	2/14/17	2/23/17	Scaffold	SC	SAMEA3375056	GCA_900164965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/965/GCA_900164965.1_16852_2_84	-	VRECD0101
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.57078	57	-	CCIN01	114	5583	5276	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602990	GCA_000823045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/045/GCA_000823045.1_96SGR	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18127	64	-	FVKX01	29	5197	5072	3/10/17	3/18/17	Scaffold	SC	SAMEA2071192	GCA_900135385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/385/GCA_900135385.1_10625_4_55	-	55
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.17571	64.1	-	FSGY01	14	5207	5108	12/14/16	4/2/17	Scaffold	SC	SAMEA2070288	GCA_900135415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/415/GCA_900135415.1_10625_4_62	-	62
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.61109	57.2	-	CCJD01	146	5838	5486	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602991	GCA_000823065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/065/GCA_000823065.1_97SGR	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.09893	28.4	-	FUOT01	31	3808	3645	2/14/17	2/23/17	Scaffold	SC	SAMEA3375057	GCA_900164975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/975/GCA_900164975.1_16852_2_85	-	VRECD0102
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.47636	50.8	-	FTXH01	377	5038	4250	1/28/17	2/26/17	Scaffold	SC	SAMEA2059496	GCA_900158865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/865/GCA_900158865.1_9803_4_86	-	2090STDY5488134
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04234	41.1	-	CDVG01	54	2029	1917	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233856	GCA_000946015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/015/GCA_000946015.1_Velvet_assembly	-	F49X
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.13369	35.2	-	CTKW01	34	2202	2076	3/26/15	3/18/17	Scaffold	SC	SAMEA1031500	GCA_001221525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/525/GCA_001221525.1_6630_8_21	-	GB-NI-011
Acinetobacter baumannii	470	PRJNA255196	255196	Proteobacteria	Gammaproteobacteria	4.00724	38.9	-	JPLJ01	47	3890	3750	11/26/14	3/16/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN02911267	GCA_000787295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/295/GCA_000787295.1_ASM78729v1	-	BJ5
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.67172	66.3	-	LLMU01	86	6355	6178	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128529	GCA_001449825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/825/GCA_001449825.1_WH-SGI-V-07223	26604259	WH-SGI-V-07223
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08875	39.6	-	CNQE02	256	2259	2065	3/23/15	3/11/17	Contig	SC	SAMEA1032720	GCA_001121665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/665/GCA_001121665.2_6952_7_10	-	R34-3171
Escherichia coli HVH 65 (4-2262045)	1281008	PRJNA186093	186093	Proteobacteria	Gammaproteobacteria	5.31618	50.6	-	AVUT01	6	5449	5056	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885720	GCA_000456945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/945/GCA_000456945.1_Esch_coli_HVH_65_4-2262045_V1	-	HVH 65 (4-2262045)
Mycobacterium tuberculosis M2136	1448760	PRJNA235772	235772	Terrabacteria group	Actinobacteria	4.42474	65.6	-	JKKL01	79	4317	4096	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599106	GCA_000664465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/465/GCA_000664465.1_Myco_tube_M2136_V1	-	M2136
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.94331	37.9	-	MDOY01	25	2998	2919	8/24/16	3/1/17	Contig	University of British Columbia	SAMN05410696	GCA_001712415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/415/GCA_001712415.1_ASM171241v1	-	OCF61
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.67898	30.4	-	NFPR01	172	1792	1611	6/8/17	6/10/17	Contig	Swansea University	SAMN06888278	GCA_002179395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/395/GCA_002179395.1_ASM217939v1	28493321	isolate_C7
Salmonella enterica subsp. enterica serovar Nchanga str. CFSAN001091	1196829	PRJNA168127	168127	Proteobacteria	Gammaproteobacteria	4.72844	52.2	-	APAE01	550	4995	4570	10/28/13	2/26/17	Contig	FDA	SAMN01813434	GCA_000487675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/675/GCA_000487675.1_ASM48767v1	24158624	CFSAN001091
Staphylococcus aureus FVRH6130	1409711	PRJNA224033	224033	Terrabacteria group	Firmicutes	2.87425	32.7	-	JBGB01	15	3020	2863	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381772	GCA_000542725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/725/GCA_000542725.1_Stap_aure_FVRH6130_V1	-	FVRH6130
Staphylococcus aureus FVRH6131	1409712	PRJNA224034	224034	Terrabacteria group	Firmicutes	2.92895	32.7	-	JBGA01	10	3094	2925	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381773	GCA_000542745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/745/GCA_000542745.1_Stap_aure_FVRH6131_V1	-	FVRH6131
Salmonella enterica subsp. enterica serovar Eastbourne str. CFSAN001084	1194158	PRJNA167395	167395	Proteobacteria	Gammaproteobacteria	4.53065	52.4	-	APAF01	418	4670	4342	10/28/13	2/26/17	Contig	FDA	SAMN01813433	GCA_000487695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/695/GCA_000487695.1_ASM48769v1	24158624	CFSAN001084
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.78807	30.2	-	NFPV01	65	1863	1717	6/8/17	6/10/17	Contig	Swansea University	SAMN06888274	GCA_002179425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/425/GCA_002179425.1_ASM217942v1	28493321	isolate_C3
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	3.06815	37.9	-	MAGN01	14	3131	3031	9/6/16	3/1/17	Contig	FDA/CFSAN	SAMN03447009	GCA_001720925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/925/GCA_001720925.1_ASM172092v1	-	KS-15037-8
Mycobacterium tuberculosis M2137	1448761	PRJNA235773	235773	Terrabacteria group	Actinobacteria	4.41986	65.6	-	JKKK01	74	4329	4107	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599107	GCA_000664485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/485/GCA_000664485.1_Myco_tube_M2137_V1	-	M2137
Escherichia coli HVH 68 (4-0888028)	1281009	PRJNA186094	186094	Proteobacteria	Gammaproteobacteria	5.1578	50.6	-	AVUU01	14	5341	4976	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885721	GCA_000456965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/965/GCA_000456965.1_Esch_coli_HVH_68_4-0888028_V1	-	HVH 68 (4-0888028)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.98824	39.8	-	COBT02	140	2156	1933	3/23/15	3/15/17	Contig	SC	SAMEA1462971	GCA_001121765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/765/GCA_001121765.2_7622_3_49	-	CH2008
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.91056	66	-	LLMW01	139	6741	6496	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128531	GCA_001449835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/835/GCA_001449835.1_WH-SGI-V-07225	26604259	WH-SGI-V-07225
Acinetobacter baumannii	470	PRJNA255196	255196	Proteobacteria	Gammaproteobacteria	4.03146	38.9	-	JPLK01	56	3931	3793	11/26/14	3/16/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN02911268	GCA_000787315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/315/GCA_000787315.1_ASM78731v1	-	BJ6
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.07276	35.2	-	CTKP01	39	2109	2007	3/26/15	3/18/17	Scaffold	SC	SAMEA1031522	GCA_001221825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/825/GCA_001221825.1_6630_8_18	-	GB-NI-007
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04633	41.1	-	CDWW01	60	2044	1928	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233863	GCA_000946035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/035/GCA_000946035.1_Velvet_assembly	-	F57G
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.57011	50.6	-	FTXI01	508	5068	4314	1/28/17	2/26/17	Scaffold	SC	SAMEA2056893	GCA_900158875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/875/GCA_900158875.1_9803_4_87	-	2090STDY5488135
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.19952	28.4	-	FUOV01	32	3935	3764	2/14/17	2/23/17	Scaffold	SC	SAMEA3375058	GCA_900164985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/985/GCA_900164985.1_16852_2_86	-	VRECD0103
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.57402	57.2	-	CCIO01	90	5635	5340	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602992	GCA_000823085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/085/GCA_000823085.1_98SGR	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.91073	64.3	-	FSGX01	34	4875	4725	12/14/16	3/21/17	Scaffold	SC	SAMEA2071194	GCA_900135435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/435/GCA_900135435.1_10625_4_61	-	61
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.17503	64.1	-	FSHF01	14	5206	5099	12/14/16	3/21/17	Scaffold	SC	SAMEA2070701	GCA_900135505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/505/GCA_900135505.1_10625_4_69	-	69
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.58465	57	-	CCIQ01	247	5693	5272	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602993	GCA_000823105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/105/GCA_000823105.1_99SGR	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.52382	28.8	-	FUOX01	66	4343	4118	2/14/17	2/23/17	Scaffold	SC	SAMEA3375059	GCA_900164995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/164/995/GCA_900164995.1_16852_2_87	-	VRECD0104
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.47529	50.8	-	FTXK01	379	5012	4235	1/28/17	2/26/17	Scaffold	SC	SAMEA2056894	GCA_900158895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/895/GCA_900158895.1_9803_4_90	-	2090STDY5488138
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.1136	41	-	CDWN01	59	2099	1980	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233845	GCA_000946075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/075/GCA_000946075.1_Velvet_assembly	-	F21O
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.06369	35.4	-	CTIX01	27	2099	1961	3/26/15	3/18/17	Scaffold	SC	SAMEA1031428	GCA_001221965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/965/GCA_001221965.1_6630_8_14	-	GB-NI-003
Acinetobacter baumannii	470	PRJNA255196	255196	Proteobacteria	Gammaproteobacteria	3.86242	39	-	JPLM01	56	3706	3560	11/26/14	3/16/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN02911270	GCA_000787355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/355/GCA_000787355.1_ASM78735v1	-	BJ8
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.29021	66.5	-	LLMX01	47	5980	5753	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128532	GCA_001449865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/865/GCA_001449865.1_WH-SGI-V-07226	26604259	WH-SGI-V-07226
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.08585	39.7	-	CMGJ01	65	2298	2083	3/22/15	3/11/17	Contig	SC	SAMEA1029446	GCA_001121825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/825/GCA_001121825.1_7038_4_20	-	SMRU2948
Escherichia coli HVH 69 (4-2837072)	1281010	PRJNA186095	186095	Proteobacteria	Gammaproteobacteria	5.33809	50.6	-	AVUV01	10	5568	5261	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885722	GCA_000456985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/456/985/GCA_000456985.1_Esch_coli_HVH_69_4-2837072_V1	-	HVH 69 (4-2837072)
Mycobacterium tuberculosis M2139	1448762	PRJNA235774	235774	Terrabacteria group	Actinobacteria	4.41289	65.6	-	JKKJ01	71	4302	4092	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599108	GCA_000664505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/505/GCA_000664505.1_Myco_tube_M2139_V1	-	M2139
Listeria monocytogenes	1639	PRJNA340018	340018	Terrabacteria group	Firmicutes	2.98849	37.8	-	MIMB01	153	3010	2904	9/26/16	3/1/17	Contig	North Carolina State University	SAMN05717795	GCA_001746875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/875/GCA_001746875.1_ASM174687v1	-	OLM 11
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.66736	30.5	-	NFPZ01	90	1767	1660	6/8/17	6/10/17	Contig	Swansea University	SAMN06888270	GCA_002179455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/455/GCA_002179455.1_ASM217945v1	28493321	isolate_C13
Salmonella enterica subsp. enterica serovar Cubana str. CFSAN001083	1194157	PRJNA167394	167394	Proteobacteria	Gammaproteobacteria	4.82403	52.2	-	APAG01	930	5358	4642	10/28/13	2/26/17	Contig	FDA	SAMN01813432	GCA_000487715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/715/GCA_000487715.1_ASM48771v1	24158624	CFSAN001083
Staphylococcus aureus PLAC6044	1409713	PRJNA224035	224035	Terrabacteria group	Firmicutes	2.9427	32.9	-	JBFZ01	21	3106	2934	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381774	GCA_000542765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/765/GCA_000542765.1_Stap_aure_PLAC6044_V1	-	PLAC6044
Staphylococcus aureus COAS6112	1409714	PRJNA224036	224036	Terrabacteria group	Firmicutes	2.88661	32.8	-	JBFY01	7	3035	2875	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381775	GCA_000542785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/785/GCA_000542785.1_Stap_aure_COAS6112_V1	-	COAS6112
Salmonella enterica subsp. enterica serovar Havana str. CFSAN001082	1194156	PRJNA167393	167393	Proteobacteria	Gammaproteobacteria	4.62039	52.5	-	APAH01	480	4703	4414	10/28/13	2/26/17	Contig	FDA	SAMN01816347	GCA_000487735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/735/GCA_000487735.1_ASM48773v1	24158624	CFSAN001082
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.53214	30.5	-	NFQE01	69	1624	1542	6/8/17	6/10/17	Contig	Swansea University	SAMN06888265	GCA_002179475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/475/GCA_002179475.1_ASM217947v1	28493321	isolate_B3
Listeria monocytogenes	1639	PRJNA340018	340018	Terrabacteria group	Firmicutes	2.92507	37.9	-	MIMA01	72	2953	2837	9/26/16	3/1/17	Contig	North Carolina State University	SAMN05717780	GCA_001746885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/885/GCA_001746885.1_ASM174688v1	-	OLM 10
Mycobacterium tuberculosis M2138	1448763	PRJNA235775	235775	Terrabacteria group	Actinobacteria	4.40782	65.6	-	JKKI01	78	4320	4085	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599109	GCA_000664525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/525/GCA_000664525.1_Myco_tube_M2138_V1	-	M2138
Escherichia coli HVH 70 (4-2963531)	1281011	PRJNA186096	186096	Proteobacteria	Gammaproteobacteria	5.56988	50.5	-	AVUW01	23	5894	5457	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885723	GCA_000457005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/005/GCA_000457005.1_Esch_coli_HVH_70_4-2963531_V1	-	HVH 70 (4-2963531)
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11584	39.5	-	CMSG01	60	2343	2101	3/23/15	3/11/17	Contig	SC	SAMEA2061948	GCA_001121845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/845/GCA_001121845.1_9803_8_6	-	23F
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.54536	66.4	-	LLMZ01	53	6242	6091	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128534	GCA_001449885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/885/GCA_001449885.1_WH-SGI-V-07268	26604259	WH-SGI-V-07228
Acinetobacter baumannii	470	PRJNA264394	264394	Proteobacteria	Gammaproteobacteria	3.96821	38.5	-	JSAO01	144	3821	3637	12/19/14	3/16/17	Contig	University of Malaya	SAMN03121815	GCA_000805365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/365/GCA_000805365.1_ASM80536v1	-	1
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.09105	35.3	-	CTIS01	29	2149	2015	3/26/15	3/18/17	Scaffold	SC	SAMEA1031414	GCA_001222045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/045/GCA_001222045.1_6630_8_15	-	GB-NI-004
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.09639	41.1	-	CDWE01	73	2084	1969	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233838	GCA_000946115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/115/GCA_000946115.1_Velvet_assembly	-	E66G
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.86237	50.5	-	FTXN01	447	5397	4648	1/28/17	2/26/17	Scaffold	SC	SAMEA2059498	GCA_900158915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/915/GCA_900158915.1_9803_4_92	-	2090STDY5488140
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.17597	28.6	-	FUOW01	36	3978	3808	2/14/17	2/23/17	Scaffold	SC	SAMEA3375060	GCA_900165005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/005/GCA_900165005.1_16852_2_88	-	VRECD0105
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.54551	57.3	-	CCIP01	80	5559	5257	11/4/14	2/21/17	Contig	UNIMI	SAMEA2602994	GCA_000823125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/125/GCA_000823125.1_9PV	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.17575	64.1	-	FSHG01	15	5206	5104	12/14/16	3/21/17	Scaffold	SC	SAMEA2071196	GCA_900135535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/535/GCA_900135535.1_10625_4_70	-	70
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.47551	64.1	-	FSHK01	42	5529	5371	12/14/16	3/21/17	Scaffold	SC	SAMEA2070710	GCA_900135565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/565/GCA_900135565.1_10625_5_11	-	96
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.73591	57.1	-	CCIR01	451	-	-	11/4/14	11/4/14	Contig	UNIMI	SAMEA2602995	GCA_000823145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/145/GCA_000823145.1_IND1	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.04511	28.3	-	FUOY01	23	3786	3631	2/14/17	2/23/17	Scaffold	SC	SAMEA3375061	GCA_900165015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/015/GCA_900165015.1_16852_2_89	-	VRECD0106
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.55528	50.7	-	FTXP01	367	5073	4324	1/28/17	2/26/17	Scaffold	SC	SAMEA2055581	GCA_900158935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/935/GCA_900158935.1_9803_4_94	-	2090STDY5488142
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05991	41.1	-	CDSG01	58	2049	1957	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233752	GCA_000946355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/355/GCA_000946355.1_Velvet_assembly	-	0Z-A
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.00626	35.4	-	CTFP01	26	2043	1911	3/26/15	3/18/17	Scaffold	SC	SAMEA1031422	GCA_001222545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/545/GCA_001222545.1_6630_8_16	-	GB-NI-005
Acinetobacter baumannii	470	PRJNA255268	255268	Proteobacteria	Gammaproteobacteria	3.86041	38.9	-	JRQY01	91	3709	3544	12/19/14	3/16/17	Contig	The University of Queensland	SAMN03080637	GCA_000805515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/515/GCA_000805515.1_ASM80551v1	-	T271
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.81088	66	-	LLNA01	122	6516	6257	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128535	GCA_001449905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/905/GCA_001449905.1_WH-SGI-V-07229	26604259	WH-SGI-V-07229
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.19625	39.5	-	CLIA01	65	2395	2173	3/21/15	3/4/17	Contig	SC	SAMEA1026011	GCA_001121945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/945/GCA_001121945.1_6925_6_16	-	SMRU2200
Escherichia coli HVH 73 (4-2393174)	1281012	PRJNA186097	186097	Proteobacteria	Gammaproteobacteria	5.38414	50.6	-	AVUX01	13	5618	5272	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885724	GCA_000457025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/025/GCA_000457025.1_Esch_coli_HVH_73_4-2393174_V1	-	HVH 73 (4-2393174)
Mycobacterium tuberculosis M2140	1448764	PRJNA235776	235776	Terrabacteria group	Actinobacteria	4.41829	65.6	-	JKKH01	76	4332	4120	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599110	GCA_000664545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/545/GCA_000664545.1_Myco_tube_M2140_V1	-	M2140
Listeria monocytogenes	1639	PRJNA229903	229903	Terrabacteria group	Firmicutes	2.73705	37.9	-	MJOK01	17	2759	2663	9/29/16	3/1/17	Contig	FDA/CFSAN	SAMN03277818	GCA_001749885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/885/GCA_001749885.1_ASM174988v1	-	NRRL B-33406
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.73259	30.4	-	NFQL01	113	1838	1702	6/8/17	6/10/17	Contig	Swansea University	SAMN06888258	GCA_002179485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/485/GCA_002179485.1_ASM217948v1	28493321	isolate_1
Salmonella enterica subsp. enterica serovar Ohio str. CFSAN001079	1194153	PRJNA167390	167390	Proteobacteria	Gammaproteobacteria	4.74153	52.4	-	APAK01	399	4854	4529	10/28/13	2/26/17	Contig	FDA	SAMN01816345	GCA_000487795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/795/GCA_000487795.1_ASM48779v1	24158624	CFSAN001079
Staphylococcus aureus COAS6114	1409715	PRJNA224037	224037	Terrabacteria group	Firmicutes	2.89661	32.7	-	JBFX01	11	3050	2887	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381776	GCA_000542805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/805/GCA_000542805.1_Stap_aure_COAS6114_V1	-	COAS6114
Staphylococcus aureus FVRH6132	1409716	PRJNA224038	224038	Terrabacteria group	Firmicutes	2.92465	32.8	-	JBFW01	10	3101	2941	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381777	GCA_000542825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/825/GCA_000542825.1_Stap_aure_FVRH6132_V1	-	FVRH6132
Salmonella enterica subsp. enterica serovar Manhattan str. CFSAN001078	1194152	PRJNA167389	167389	Proteobacteria	Gammaproteobacteria	4.61339	52.5	-	APAL01	618	4755	4431	10/28/13	2/26/17	Contig	FDA	SAMN01816344	GCA_000487815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/815/GCA_000487815.1_ASM48781v1	24158624	CFSAN001078
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.62956	30.4	-	NFOL01	145	1722	1604	6/8/17	6/10/17	Contig	Swansea University	SAMN06888310	GCA_002179615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/615/GCA_002179615.1_ASM217961v1	28493321	isolate_H6
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.99641	37.9	-	MJTL01	17	3052	2976	9/30/16	3/1/17	Contig	University of California at Davis	SAMN03357061	GCA_001751975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/975/GCA_001751975.1_ASM175197v1	-	CFSAN002249
Mycobacterium tuberculosis M2248	1448765	PRJNA235777	235777	Terrabacteria group	Actinobacteria	4.42347	65.6	-	JKKG01	80	4351	4115	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599111	GCA_000664565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/565/GCA_000664565.1_Myco_tube_M2248_V1	-	M2248
Escherichia coli HVH 74 (4-1034782)	1281013	PRJNA186098	186098	Proteobacteria	Gammaproteobacteria	5.26375	50.4	-	AVUY01	15	5355	4988	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885725	GCA_000457045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/045/GCA_000457045.1_Esch_coli_HVH_74_4-1034782_V1	-	HVH 74 (4-1034782)
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11121	39.7	-	CMQA01	103	2354	2122	3/23/15	3/4/17	Contig	SC	SAMEA2061940	GCA_001122005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/005/GCA_001122005.1_9803_7_77	-	19F
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.61076	66.2	-	LLNC01	110	6346	6117	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128537	GCA_001449925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/925/GCA_001449925.1_WH-SGI-V-07231	26604259	WH-SGI-V-07231
Acinetobacter baumannii	470	PRJNA255268	255268	Proteobacteria	Gammaproteobacteria	3.94301	39.1	-	JRQX01	105	3875	3726	12/19/14	3/16/17	Contig	The University of Queensland	SAMN03080636	GCA_000805525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/525/GCA_000805525.1_ASM80552v1	-	T258
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.04155	35.3	-	CTEY01	86	2082	1993	3/26/15	3/18/17	Scaffold	SC	SAMEA1031451	GCA_001222685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/685/GCA_001222685.1_6630_8_22	-	GB-NI-014
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04226	41.2	-	CDWA01	57	2047	1942	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233818	GCA_000946395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/395/GCA_000946395.1_Velvet_assembly	-	E11Q
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.84985	50.5	-	FTXR01	440	5529	4652	1/28/17	2/26/17	Scaffold	SC	SAMEA3356019	GCA_900158965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/965/GCA_900158965.1_16703_8_1	-	3626STDY6095476
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.26644	28.2	-	FUOZ01	40	4020	3871	2/14/17	2/23/17	Scaffold	SC	SAMEA3375067	GCA_900165025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/025/GCA_900165025.1_16780_8_1	-	VRECD0112
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.757	57.1	-	CCIS01	424	-	-	11/4/14	11/4/14	Contig	UNIMI	SAMEA2602996	GCA_000823165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/165/GCA_000823165.1_IND3	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.5596	63.9	-	FVLF01	33	5755	5540	3/10/17	3/18/17	Scaffold	SC	SAMEA2070713	GCA_900135605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/605/GCA_900135605.1_10625_5_20	-	105
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.48366	64.1	-	FVLD01	62	5617	5387	3/10/17	3/18/17	Scaffold	SC	SAMEA2071230	GCA_900135635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/635/GCA_900135635.1_10625_5_9	-	94
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.80908	57	-	CCIT01	558	-	-	11/4/14	11/4/14	Contig	UNIMI	SAMEA2602997	GCA_000823185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/185/GCA_000823185.1_NAIVER	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.20528	28.6	-	FUPA01	33	3943	3785	2/14/17	2/23/17	Scaffold	SC	SAMEA3375068	GCA_900165035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/035/GCA_900165035.1_16780_8_2	-	VRECD0113
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.91636	50.5	-	FTXT01	453	5644	4727	1/28/17	2/26/17	Scaffold	SC	SAMEA3356020	GCA_900158975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/975/GCA_900158975.1_16703_8_2	-	3626STDY6095477
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03501	41.2	-	CDUJ01	53	2020	1923	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233829	GCA_000946515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/515/GCA_000946515.1_Velvet_assembly	-	E36X
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.05676	35.3	-	CTKF01	18	2125	2004	3/26/15	3/18/17	Scaffold	SC	SAMEA1031480	GCA_001223485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/485/GCA_001223485.1_6630_8_19	-	GB-NI-009
Acinetobacter baumannii	470	PRJNA255268	255268	Proteobacteria	Gammaproteobacteria	3.67338	39	-	JRQW01	128	3534	3312	12/19/14	3/16/17	Contig	The University of Queensland	SAMN03080635	GCA_000805535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/535/GCA_000805535.1_ASM80553v1	-	T229
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.26947	66.7	-	LLNF01	65	5983	5716	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128540	GCA_001449965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/965/GCA_001449965.1_WH-SGI-V-07234	26604259	WH-SGI-V-07234
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09712	39.4	-	CKKL01	83	2334	2114	3/21/15	3/4/17	Contig	SC	SAMEA1024076	GCA_001122145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/145/GCA_001122145.1_6631_7_15	-	10B
Escherichia coli HVH 76 (4-2538717)	1281014	PRJNA186099	186099	Proteobacteria	Gammaproteobacteria	5.18709	50.5	-	AVUZ01	6	5376	5047	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885726	GCA_000457065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/065/GCA_000457065.1_Esch_coli_HVH_76_4-2538717_V1	-	HVH 76 (4-2538717)
Mycobacterium tuberculosis M2218	1448766	PRJNA235778	235778	Terrabacteria group	Actinobacteria	4.42751	65.6	-	JKKF01	73	4330	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599112	GCA_000664585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/585/GCA_000664585.1_Myco_tube_M2218_V1	-	M2218
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.85925	38.1	-	MKML01	12	2877	2810	10/12/16	3/1/17	Contig	University of California at Davis	SAMN03277747	GCA_001759585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/585/GCA_001759585.1_BCW_3821	-	NRRL B-33115
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.60554	29.5	-	NFOE01	130	1627	1537	6/8/17	6/10/17	Contig	Swansea University	SAMN06888317	GCA_002179635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/635/GCA_002179635.1_ASM217963v1	28493321	isolate_S4
Salmonella enterica subsp. enterica serovar Norwich str. CFSAN001077	1194151	PRJNA167388	167388	Proteobacteria	Gammaproteobacteria	4.81432	52.2	-	APAM01	271	5011	4612	10/28/13	2/26/17	Contig	FDA	SAMN01816343	GCA_000487835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/835/GCA_000487835.1_ASM48783v1	24158624	CFSAN001077
Staphylococcus aureus OCMM6137	1409717	PRJNA224039	224039	Terrabacteria group	Firmicutes	2.88308	32.7	-	JBFV01	13	3042	2873	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381778	GCA_000542845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/845/GCA_000542845.1_Stap_aure_OCMM6137_V1	-	OCMM6137
Staphylococcus aureus OCMM6140	1409718	PRJNA224040	224040	Terrabacteria group	Firmicutes	2.9341	32.8	-	JBFU01	14	3114	2946	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381779	GCA_000542865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/865/GCA_000542865.1_Stap_aure_OCMM6140_V1	-	OCMM6140
Salmonella enterica subsp. enterica serovar Litchfield str. CFSAN001076	1194150	PRJNA167387	167387	Proteobacteria	Gammaproteobacteria	4.72027	52.2	-	APAN01	98	4822	4561	10/28/13	2/26/17	Contig	FDA	SAMN01816342	GCA_000487855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/855/GCA_000487855.1_ASM48785v1	24158624	CFSAN001076
Campylobacter jejuni	197	PRJNA379389	379389	Proteobacteria	delta/epsilon subdivisions	1.60608	30.5	-	NACJ01	37	1663	1547	6/19/17	6/22/17	Contig	Uppsala University	SAMN06611181	GCA_002197895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/895/GCA_002197895.1_ASM219789v1	-	VA33
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.87374	38.1	-	MKMU01	12	2856	2779	10/12/16	3/1/17	Contig	University of California at Davis	SAMN03277755	GCA_001759755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/755/GCA_001759755.1_BCW_3830	-	NRRL B-33183
Mycobacterium tuberculosis M2211	1448767	PRJNA235779	235779	Terrabacteria group	Actinobacteria	4.43234	65.6	-	JKKE01	83	4352	4121	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599113	GCA_000664605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/605/GCA_000664605.1_Myco_tube_M2211_V1	-	M2211
Escherichia coli HVH 77 (4-2605759)	1281015	PRJNA186100	186100	Proteobacteria	Gammaproteobacteria	5.37803	50.4	-	AVVA01	58	5528	5053	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885727	GCA_000457085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/085/GCA_000457085.1_Esch_coli_HVH_77_4-2605759_V1	-	HVH 77 (4-2605759)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.13534	39.5	-	CNYJ02	197	2325	2122	3/23/15	3/11/17	Contig	SC	SAMEA1463266	GCA_001122185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/185/GCA_001122185.2_7553_4_31	-	NP7012
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.78252	66.3	-	LLNG01	95	6487	6298	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128541	GCA_001449985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/985/GCA_001449985.1_WH-SGI-V-07235	26604259	WH-SGI-V-07235
Acinetobacter baumannii	470	PRJNA255268	255268	Proteobacteria	Gammaproteobacteria	3.93856	38.8	-	JRQT01	69	3808	3664	12/19/14	3/16/17	Contig	The University of Queensland	SAMN03080627	GCA_000805545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/545/GCA_000805545.1_ASM80554v1	-	T7
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.05698	35.3	-	CHJW01	14	2127	2005	4/21/15	3/18/17	Scaffold	SC	SAMEA1031415	GCA_001348555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/555/GCA_001348555.1_6630_6_8	-	BG-NI-011
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.08348	41.2	-	CDWQ01	60	2092	1993	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233857	GCA_000946535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/535/GCA_000946535.1_Velvet_assembly	-	F4V
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.86035	50.7	-	FTXS01	440	5594	4652	1/28/17	2/26/17	Scaffold	SC	SAMEA3356021	GCA_900158985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/985/GCA_900158985.1_16703_8_3	-	3626STDY6095478
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.35994	28.3	-	FUPB01	38	4115	3909	2/14/17	2/23/17	Scaffold	SC	SAMEA3375069	GCA_900165045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/045/GCA_900165045.1_16780_8_3	-	VRECD0114
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.74212	57.1	-	CCIU01	600	-	-	11/4/14	11/4/14	Contig	UNIMI	SAMEA2602998	GCA_000823205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/205/GCA_000823205.1_IND2	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.88886	64.2	-	FSHQ01	16	4879	4760	12/14/16	3/21/17	Scaffold	SC	SAMEA2259561	GCA_900135655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/655/GCA_900135655.1_11861_7_24	-	756
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82474	64.1	-	FWCU01	11	4751	4641	3/16/17	3/24/17	Scaffold	SC	SAMEA2259563	GCA_900135665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/665/GCA_900135665.1_11861_7_26	-	758
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.76513	57.1	-	CCIV01	630	-	-	11/4/14	11/4/14	Contig	UNIMI	SAMEA2602999	GCA_000823225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/225/GCA_000823225.1_REV1	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.1475	28.5	-	FUPD01	25	3898	3727	2/14/17	2/23/17	Scaffold	SC	SAMEA3375076	GCA_900165065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/065/GCA_900165065.1_16780_8_10	-	VRECD0022
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.93501	50.5	-	FTXV01	461	5840	4745	1/28/17	3/2/17	Scaffold	SC	SAMEA3356023	GCA_900158995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/158/995/GCA_900158995.1_16703_8_5	-	3626STDY6095480
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.06301	41.1	-	CDXS01	62	2059	1959	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234053	GCA_000946555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/555/GCA_000946555.1_Velvet_assembly	-	S3F
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	1.99182	35.2	-	CGCE01	16	2055	1929	3/15/15	3/18/17	Scaffold	SC	SAMEA1031416	GCA_001348575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/575/GCA_001348575.1_6630_8_4	-	CZ-NI-007
Acinetobacter baumannii	470	PRJNA255268	255268	Proteobacteria	Gammaproteobacteria	3.87807	38.9	-	JRQS01	84	3762	3617	12/19/14	3/16/17	Contig	The University of Queensland	SAMN02912205	GCA_000805595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/595/GCA_000805595.1_ASM80559v1	-	T87
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.46058	65.4	-	LLNI01	174	7330	7061	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128543	GCA_001450005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/005/GCA_001450005.1_WH-SGI-V-07237	26604259	WH-SGI-V-07237
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.10465	39.5	-	CMMX01	56	2298	2064	3/22/15	3/4/17	Contig	SC	SAMEA1029389	GCA_001122245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/245/GCA_001122245.1_7068_4_8	-	SMRU3128
Escherichia coli HVH 78 (4-2735946)	1281016	PRJNA186101	186101	Proteobacteria	Gammaproteobacteria	5.37182	50.4	-	AVVB01	16	5499	5119	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885728	GCA_000457105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/105/GCA_000457105.1_Esch_coli_HVH_78_4-2735946_V1	-	HVH 78 (4-2735946)
Mycobacterium tuberculosis M2206	1448768	PRJNA235780	235780	Terrabacteria group	Actinobacteria	4.42008	65.6	-	JKKD01	73	4311	4093	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599114	GCA_000664625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/625/GCA_000664625.1_Myco_tube_M2206_V1	-	M2206
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.87069	38.1	-	MKOA01	12	2855	2784	10/12/16	3/1/17	Contig	University of California at Davis	SAMN03277720	GCA_001760395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/395/GCA_001760395.1_BCW_3862	-	NRRL B-33384
Campylobacter jejuni	197	PRJNA379389	379389	Proteobacteria	delta/epsilon subdivisions	1.8603	30.3	-	NACL01	91	2002	1790	6/19/17	6/22/17	Contig	Uppsala University	SAMN06611205	GCA_002197915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/915/GCA_002197915.1_ASM219791v1	-	VA49
Salmonella enterica subsp. enterica serovar Hartford str. CFSAN001075	1194149	PRJNA167386	167386	Proteobacteria	Gammaproteobacteria	4.87962	52.2	-	APAO01	50	4970	4673	10/28/13	2/26/17	Contig	FDA	SAMN01816341	GCA_000487875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/875/GCA_000487875.1_ASM48787v1	24158624	CFSAN001075
Staphylococcus aureus WAMC6060	1409719	PRJNA224041	224041	Terrabacteria group	Firmicutes	2.91944	32.8	-	JBFT01	12	3095	2930	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381780	GCA_000542885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/885/GCA_000542885.1_Stap_aure_WAMC6060_V1	-	WAMC6060
Staphylococcus aureus GGMC6036	1409722	PRJNA224044	224044	Terrabacteria group	Firmicutes	2.88557	32.7	-	JBFQ01	6	3036	2876	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381783	GCA_000542905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/905/GCA_000542905.1_Stap_aure_GGMC6036_V1	-	GGMC6036
Salmonella enterica subsp. enterica serovar Braenderup str. CFSAN000756	1182171	PRJNA162799	162799	Proteobacteria	Gammaproteobacteria	4.68963	52.3	-	APAP01	116	4778	4516	10/28/13	2/26/17	Contig	FDA	SAMN01805336	GCA_000487895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/895/GCA_000487895.1_ASM48789v1	24158624	CFSAN000756
Campylobacter jejuni	197	PRJNA379389	379389	Proteobacteria	delta/epsilon subdivisions	1.75459	30.2	-	NACK01	63	1844	1686	6/19/17	6/22/17	Contig	Uppsala University	SAMN06611182	GCA_002197935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/935/GCA_002197935.1_ASM219793v1	-	VA48
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.85472	38	-	MKOC01	16	2860	2788	10/12/16	3/1/17	Contig	University of California at Davis	SAMN03277624	GCA_001760445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/445/GCA_001760445.1_BCW_3864	-	NRRL B-33387
Mycobacterium tuberculosis M2204	1448769	PRJNA235781	235781	Terrabacteria group	Actinobacteria	4.39308	65.6	-	JKKC01	80	4328	4112	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599115	GCA_000664645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/645/GCA_000664645.1_Myco_tube_M2204_V1	-	M2204
Escherichia coli HVH 79 (4-2512823)	1281017	PRJNA186102	186102	Proteobacteria	Gammaproteobacteria	5.16846	50.7	-	AVVC01	13	5356	4945	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885729	GCA_000457125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/125/GCA_000457125.1_Esch_coli_HVH_79_4-2512823_V1	-	HVH 79 (4-2512823)
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.02478	39.7	-	CRJC01	54	2225	2017	3/23/15	3/4/17	Contig	SC	SAMEA1025218	GCA_001122285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/285/GCA_001122285.1_6753_1_8	-	SMRU1472
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.85401	66.2	-	LLNJ01	79	6605	6436	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128544	GCA_001450015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/015/GCA_001450015.1_WH-SGI-V-07238	26604259	WH-SGI-V-07238
Acinetobacter baumannii	470	PRJNA255268	255268	Proteobacteria	Gammaproteobacteria	3.98148	38.9	-	JRQU01	104	3905	3755	12/19/14	3/16/17	Contig	The University of Queensland	SAMN03080631	GCA_000805615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/615/GCA_000805615.1_ASM80561v1	-	T185
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.09219	35.5	-	CGCK01	34	2172	2041	3/15/15	3/18/17	Scaffold	SC	SAMEA1031417	GCA_001348595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/595/GCA_001348595.1_6630_5_13	-	DK-NI-010
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.06291	41.1	-	CDYB01	55	2056	1956	2/14/15	3/16/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234066	GCA_000946575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/575/GCA_000946575.1_Velvet_assembly	-	S7R
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.85309	50.4	-	FTXU01	438	5577	4643	1/28/17	2/26/17	Scaffold	SC	SAMEA3356024	GCA_900159005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/005/GCA_900159005.1_16703_8_6	-	3626STDY6095481
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.30025	29.2	-	FUPE01	41	4080	3887	2/14/17	2/23/17	Scaffold	SC	SAMEA3375077	GCA_900165075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/075/GCA_900165075.1_16780_8_11	-	VRECD0031
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.74106	57.1	-	CCIW01	368	-	-	11/4/14	11/4/14	Contig	UNIMI	SAMEA2603000	GCA_000823245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/245/GCA_000823245.1_REV2	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.99162	64	-	FVLE01	12	4994	4851	3/10/17	3/18/17	Scaffold	SC	SAMEA2259564	GCA_900135675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/675/GCA_900135675.1_11861_7_27	-	759
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.86909	64.1	-	FVLG01	13	4815	4679	3/10/17	3/18/17	Scaffold	SC	SAMEA2259572	GCA_900135685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/685/GCA_900135685.1_11861_7_35	-	767
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.74886	57.1	-	CCIX01	501	-	-	11/4/14	11/4/14	Contig	UNIMI	SAMEA2603001	GCA_000823265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/265/GCA_000823265.1_REV3	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.23132	28.7	-	FUPF01	35	3989	3789	2/14/17	2/23/17	Scaffold	SC	SAMEA3375099	GCA_900165085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/085/GCA_900165085.1_16780_8_33	-	VRECD0143
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.83878	50.5	-	FTXX01	427	5506	4632	1/28/17	2/26/17	Scaffold	SC	SAMEA3356025	GCA_900159015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/015/GCA_900159015.1_16703_8_7	-	3626STDY6095482
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.06033	41.1	-	CDVJ01	64	2056	1941	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233864	GCA_000946675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/675/GCA_000946675.1_Velvet_assembly	-	F5D
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.05405	35.4	-	CFLB01	15	2114	1996	3/15/15	3/18/17	Scaffold	SC	SAMEA1031426	GCA_001348635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/635/GCA_001348635.1_6630_6_2	-	BG-NI-004
Acinetobacter baumannii	470	PRJNA255268	255268	Proteobacteria	Gammaproteobacteria	3.97664	38.9	-	JRQV01	110	3903	3750	12/19/14	3/16/17	Contig	The University of Queensland	SAMN03080632	GCA_000805635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/635/GCA_000805635.1_ASM80563v1	-	T188
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.48551	65.6	-	LLNL01	170	7408	7172	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128546	GCA_001450045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/045/GCA_001450045.1_WH-SGI-V-07240	26604259	WH-SGI-V-07240
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.98325	39.7	-	CNWU02	122	2193	1975	3/23/15	3/5/17	Contig	SC	SAMEA1032410	GCA_001122385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/385/GCA_001122385.2_7001_2_1	-	R34-3101
Escherichia coli HVH 80 (4-2428830)	1281018	PRJNA186103	186103	Proteobacteria	Gammaproteobacteria	5.18543	50.7	-	AVVD01	14	5371	5040	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885730	GCA_000457145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/145/GCA_000457145.1_Esch_coli_HVH_80_4-2428830_V1	-	HVH 80 (4-2428830)
Mycobacterium tuberculosis M2203	1448770	PRJNA235782	235782	Terrabacteria group	Actinobacteria	4.43666	65.6	-	JKKB01	75	4333	4119	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599116	GCA_000664665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/665/GCA_000664665.1_Myco_tube_M2203_V1	-	M2203
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.82815	37.8	-	MKOI01	29	2877	2784	10/12/16	3/1/17	Contig	University of California at Davis	SAMN03277629	GCA_001760565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/565/GCA_001760565.1_BCW_3870	-	NRRL B-33408
Campylobacter jejuni	197	PRJEB17680	352803	Proteobacteria	delta/epsilon subdivisions	1.61562	30.5	-	FPEE01	83	1726	1615	11/7/16	3/20/17	Contig	LSHTM	SAMEA4534847	GCA_900117385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/385/GCA_900117385.1_11168H_contigs	-	-
Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673	1124962	PRJNA78387	78387	Proteobacteria	Gammaproteobacteria	4.98119	52.2	-	AOYK01	139	5231	4858	10/28/13	2/26/17	Contig	FDA	SAMN01805328	GCA_000493295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/493/295/GCA_000493295.1_ASM49329v1	24158624	ATCC BAA-1673
Staphylococcus aureus WAMC6062	1409723	PRJNA224045	224045	Terrabacteria group	Firmicutes	2.88086	32.9	-	JBFP01	23	3012	2832	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381784	GCA_000542925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/925/GCA_000542925.1_Stap_aure_WAMC6062_V1	-	WAMC6062
Staphylococcus aureus CHAP6035	1409727	PRJNA224049	224049	Terrabacteria group	Firmicutes	2.89894	32.7	-	JBFN01	9	3057	2896	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381788	GCA_000542945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/945/GCA_000542945.1_Stap_aure_CHAP6035_V1	-	CHAP6035
Salmonella enterica subsp. enterica serovar Agona str. 400095 13	1072592	PRJNA71293	71293	Proteobacteria	Gammaproteobacteria	4.76849	52.1	-	AYDE01	47	4840	4532	10/31/13	2/26/17	Contig	FDA	SAMN02415167	GCA_000494325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/325/GCA_000494325.1_CFSAN000453_01.0	-	400095 13
Campylobacter jejuni	197	PRJEB5994	247752	Proteobacteria	delta/epsilon subdivisions	1.67503	30.7	-	CCDE01	50	1752	1610	9/6/14	3/16/17	Scaffold	UNIVERSITY OF HELSINKI	SAMEA2518458	GCA_000752275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/275/GCA_000752275.1_Po_2	-	-
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.83743	37.9	-	MKOL01	15	2853	2790	10/12/16	3/1/17	Contig	University of California at Davis	SAMN03277664	GCA_001760615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/615/GCA_001760615.1_BCW_3873	-	NRRL B-33556
Mycobacterium tuberculosis M2199	1448771	PRJNA235783	235783	Terrabacteria group	Actinobacteria	4.41186	65.6	-	JKKA01	71	4323	4137	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599117	GCA_000664685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/685/GCA_000664685.1_Myco_tube_M2199_V1	-	M2199
Escherichia coli HVH 82 (4-2209276)	1281019	PRJNA186104	186104	Proteobacteria	Gammaproteobacteria	5.33164	50.6	-	AVVE01	14	5528	5167	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885731	GCA_000457165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/165/GCA_000457165.1_Esch_coli_HVH_82_4-2209276_V1	-	HVH 82 (4-2209276)
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.17038	39.5	-	CMJY01	62	2421	2195	3/23/15	3/4/17	Contig	SC	SAMEA1026020	GCA_001122405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/405/GCA_001122405.1_7038_8_48	-	SMRU2256
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.73356	66.1	-	LLNP01	95	6536	6331	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128550	GCA_001450085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/085/GCA_001450085.1_WH-SGI-V-07244	26604259	WH-SGI-V-07244
Acinetobacter baumannii	470	PRJNA270778	270778	Proteobacteria	Gammaproteobacteria	4.07359	39.2	-	JWRU03	352	4035	3854	12/29/14	3/18/17	Contig	JCVI	SAMN03268799	GCA_000808765.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/765/GCA_000808765.3_Velvet_assembly_of_Acinetobacter_baumannii_ABUH42783	-	ABUH42783
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.05378	35.2	-	CHYR01	21	2133	2007	4/21/15	3/18/17	Scaffold	SC	SAMEA1031435	GCA_001348675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/675/GCA_001348675.1_6630_5_18	-	DK-NI-015
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.07359	41.2	-	CDUE01	58	2069	1969	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233814	GCA_000946795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/795/GCA_000946795.1_Velvet_assembly	-	E05E
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.95396	50.4	-	FTXW01	456	5686	4769	1/28/17	2/26/17	Scaffold	SC	SAMEA3356026	GCA_900159025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/025/GCA_900159025.1_16703_8_8	-	3626STDY6095483
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.12009	28.6	-	FUPG01	35	3820	3671	2/14/17	2/23/17	Scaffold	SC	SAMEA3375100	GCA_900165095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/095/GCA_900165095.1_16780_8_34	-	VRECD0144
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.75341	57.1	-	CCIY01	419	-	-	11/4/14	11/4/14	Contig	UNIMI	SAMEA2603002	GCA_000823285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/823/285/GCA_000823285.1_NAIVEI	-	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.72057	64.3	-	FVLI01	11	4682	4543	3/10/17	3/18/17	Scaffold	SC	SAMEA2259596	GCA_900135695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/695/GCA_900135695.1_11861_7_56	-	791
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.43284	63.9	-	FSHS01	32	5536	5301	12/14/16	3/21/17	Scaffold	SC	SAMEA2259609	GCA_900135705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/705/GCA_900135705.1_11861_7_69	-	804
Klebsiella pneumoniae subsp. ozaenae	574	PRJEB7845	268467	Proteobacteria	Gammaproteobacteria	4.92525	57.3	-	CDJH01	128	4994	4473	11/28/14	2/21/17	Contig	URMITE	SAMEA3141919	GCA_000826585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/585/GCA_000826585.1_Klebsiella_pneumoniae_subsp._ozaenae	-	ATCC 11296
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.21009	28.6	-	FUPH01	40	4023	3858	2/14/17	2/23/17	Scaffold	SC	SAMEA3375101	GCA_900165105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/105/GCA_900165105.1_16780_8_35	-	VRECD0145
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.87573	50.5	-	FTXY01	422	5577	4689	1/28/17	2/26/17	Scaffold	SC	SAMEA3356027	GCA_900159035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/035/GCA_900159035.1_16703_8_9	-	3626STDY6095484
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05744	41.1	-	CDWK01	61	2054	1940	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233805	GCA_000946875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/875/GCA_000946875.1_Velvet_assembly	-	E00C
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.06736	35.3	-	CHDT01	19	2135	2015	4/21/15	3/18/17	Scaffold	SC	SAMEA1031440	GCA_001348695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/695/GCA_001348695.1_6630_5_16	-	DK-NI-013
Acinetobacter baumannii	470	PRJNA270778	270778	Proteobacteria	Gammaproteobacteria	4.16282	39	-	JWRZ03	128	4079	3938	12/29/14	3/18/17	Contig	JCVI	SAMN03268801	GCA_000808775.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/775/GCA_000808775.3_Velvet_assembly_of_Acinetobacter_baumannii_ABUH504227	-	ABUH504227
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.83239	66.2	-	LLNQ01	45	6544	6380	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128551	GCA_001450095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/095/GCA_001450095.1_WH-SGI-V-07245	26604259	WH-SGI-V-07245
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.17711	39.4	-	CMIL01	73	2387	2139	3/23/15	3/4/17	Contig	SC	SAMEA1029258	GCA_001122445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/445/GCA_001122445.1_7038_7_10	-	SMRU3010
Escherichia coli HVH 84 (4-1021478)	1281021	PRJNA186106	186106	Proteobacteria	Gammaproteobacteria	5.24197	50.8	-	AVVF01	7	5405	5062	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885733	GCA_000457185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/185/GCA_000457185.1_Esch_coli_HVH_84_4-1021478_V1	-	HVH 84 (4-1021478)
Mycobacterium tuberculosis M2198	1448772	PRJNA235784	235784	Terrabacteria group	Actinobacteria	4.41949	65.6	-	JKJZ01	73	4309	4098	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599118	GCA_000664705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/705/GCA_000664705.1_Myco_tube_M2198_V1	-	M2198
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.95858	37.8	-	MKOM01	60	2985	2899	10/12/16	3/1/17	Contig	University of California at Davis	SAMN03277698	GCA_001760645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/645/GCA_001760645.1_BCW_3874	-	NRRL B-33565
Campylobacter jejuni	197	PRJEB5994	247752	Proteobacteria	delta/epsilon subdivisions	1.66848	30.6	-	CCDD01	57	1739	1610	9/5/14	3/16/17	Scaffold	UNIVERSITY OF HELSINKI	SAMEA2518456	GCA_000752375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/375/GCA_000752375.1_Ma_B	-	-
Salmonella enterica subsp. enterica serovar Agona str. 241981	1072587	PRJNA71283	71283	Proteobacteria	Gammaproteobacteria	4.72363	52.1	-	AYDJ01	72	4802	4349	10/31/13	2/26/17	Contig	FDA	SAMN02415172	GCA_000494365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/365/GCA_000494365.1_CFSAN000479_01.0	-	241981
Staphylococcus aureus CHAP6102	1409729	PRJNA224051	224051	Terrabacteria group	Firmicutes	2.82104	32.9	-	JBFL01	9	2940	2784	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381790	GCA_000542965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/965/GCA_000542965.1_Stap_aure_CHAP6102_V1	-	CHAP6102
Staphylococcus aureus HBHO6022	1409730	PRJNA224052	224052	Terrabacteria group	Firmicutes	2.8561	32.7	-	JBFK01	9	2986	2825	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381791	GCA_000542985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/542/985/GCA_000542985.1_Stap_aure_HBHO6022_V1	-	HBHO6022
Salmonella enterica subsp. enterica serovar Agona str. 400095 17	1072594	PRJNA71297	71297	Proteobacteria	Gammaproteobacteria	4.76451	52.1	-	AYDC01	79	4861	4467	10/31/13	2/26/17	Contig	FDA	SAMN02415165	GCA_000494405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/405/GCA_000494405.1_CFSAN000455_01.0	-	400095 17
Campylobacter jejuni	197	PRJEB5994	247752	Proteobacteria	delta/epsilon subdivisions	1.68233	30.7	-	CCDB01	48	1753	1599	9/5/14	3/16/17	Scaffold	UNIVERSITY OF HELSINKI	SAMEA2518393	GCA_000752795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/795/GCA_000752795.1_Le_204R	-	-
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.08701	37.8	-	MKOP01	36	3170	3077	10/12/16	3/1/17	Contig	University of California at Davis	SAMN03277683	GCA_001760695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/695/GCA_001760695.1_BCW_3877	-	NRRL B-33570
Mycobacterium tuberculosis M2192	1448774	PRJNA235786	235786	Terrabacteria group	Actinobacteria	4.42757	65.6	-	JKJX01	70	4311	4105	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599120	GCA_000664725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/725/GCA_000664725.1_Myco_tube_M2192_V1	-	M2192
Escherichia coli HVH 85 (4-0792144)	1281022	PRJNA186107	186107	Proteobacteria	Gammaproteobacteria	5.10831	50.6	-	AVVG01	10	5238	4942	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885734	GCA_000457205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/205/GCA_000457205.1_Esch_coli_HVH_85_4-0792144_V1	-	HVH 85 (4-0792144)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07775	39.6	-	CODP02	123	2290	2076	3/23/15	3/11/17	Contig	SC	SAMEA1463192	GCA_001122505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/505/GCA_001122505.2_7622_4_21	-	LE4058
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.08868	65.9	-	LLNT01	215	6977	6591	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128554	GCA_001450145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/145/GCA_001450145.1_WH-SGI-V-07369	26604259	WH-SGI-V-07369
Acinetobacter baumannii	470	PRJNA270778	270778	Proteobacteria	Gammaproteobacteria	3.74311	39	-	JWRT03	168	3584	3455	12/29/14	3/18/17	Contig	JCVI	SAMN03268803	GCA_000808785.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/785/GCA_000808785.3_Velvet_assembly_of_Acinetobacter_baumannii_ABUH4837	-	ABUH4837
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.02516	35.1	-	CHZE01	31	2062	1947	4/21/15	3/18/17	Scaffold	SC	SAMEA1031450	GCA_001348755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/755/GCA_001348755.1_6630_7_9	-	IT-NI-008
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05039	41.2	-	CEBS01	56	2041	1949	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234070	GCA_000946955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/955/GCA_000946955.1_Velvet_assembly	-	S8V
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.9589	50.5	-	FTXZ01	442	5725	4790	1/28/17	2/26/17	Scaffold	SC	SAMEA3356028	GCA_900159045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/045/GCA_900159045.1_16703_8_10	-	3626STDY6095485
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.29441	28.6	-	FUPJ01	36	4059	3891	2/14/17	2/23/17	Scaffold	SC	SAMEA3375102	GCA_900165115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/115/GCA_900165115.1_16780_8_36	-	VRECD0146
Klebsiella pneumoniae	573	PRJEB1319	187156	Proteobacteria	Gammaproteobacteria	5.64738	57	-	CDNA01	47	5720	5455	1/15/15	2/21/17	Contig	Seydina	SAMEA3140027	GCA_000826605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/605/GCA_000826605.1_Klebsiella_pneumoniae_KMP_nasey	-	KPM_nasey
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.43317	64	-	FSHR01	28	5512	5332	12/14/16	3/21/17	Scaffold	SC	SAMEA2259612	GCA_900135725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/725/GCA_900135725.1_11861_7_72	-	807
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82557	64.1	-	FVLJ01	10	4773	4611	3/10/17	3/18/17	Scaffold	SC	SAMEA2259630	GCA_900135735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/735/GCA_900135735.1_11861_7_85	-	825
Klebsiella pneumoniae	573	PRJNA271550	271550	Proteobacteria	Gammaproteobacteria	5.17761	58	-	JXBI01	52	5097	4864	1/23/15	2/21/17	Contig	University of Malaya	SAMN03274866	GCA_000827665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/827/665/GCA_000827665.1_ASM82766v1	-	1kgm
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.39856	28.5	-	FUPI01	56	4193	4029	2/14/17	2/23/17	Scaffold	SC	SAMEA3375103	GCA_900165125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/125/GCA_900165125.1_16780_8_37	-	VRECD0147
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.71826	50.7	-	FTYA01	402	5321	4553	1/28/17	3/2/17	Scaffold	SC	SAMEA3356029	GCA_900159055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/055/GCA_900159055.1_16703_8_11	-	3626STDY6095486
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05964	41.1	-	CDVX01	63	2053	1959	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233810	GCA_000946995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/995/GCA_000946995.1_Velvet_assembly	-	E03B
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.05149	35.3	-	CGCD01	16	2116	2004	3/15/15	3/18/17	Scaffold	SC	SAMEA1031455	GCA_001348775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/775/GCA_001348775.1_6630_5_15	-	DK-NI-012
Acinetobacter baumannii	470	PRJNA270778	270778	Proteobacteria	Gammaproteobacteria	3.8325	39	-	JWRV03	156	3692	3570	12/29/14	3/18/17	Contig	JCVI	SAMN03268804	GCA_000808815.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/815/GCA_000808815.3_Velvet_assembly_of_Acinetobacter_baumannii_ABUH60486	-	ABUH60486
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.58109	66.4	-	LLNU01	174	6326	6012	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128555	GCA_001450165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/165/GCA_001450165.1_WH-SGI-V-07370	26604259	WH-SGI-V-07370
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.12753	39.5	-	CKJV01	94	2325	2070	3/21/15	3/11/17	Contig	SC	SAMEA1023846	GCA_001122525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/525/GCA_001122525.1_6631_5_6	-	5
Escherichia coli HVH 87 (4-5977630)	1281024	PRJNA186109	186109	Proteobacteria	Gammaproteobacteria	5.57541	50.5	-	AVVI01	24	5971	5436	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885736	GCA_000457225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/225/GCA_000457225.1_Esch_coli_HVH_87_4-5977630_V1	-	HVH 87 (4-5977630)
Mycobacterium tuberculosis M2191	1448775	PRJNA235787	235787	Terrabacteria group	Actinobacteria	4.40723	65.6	-	JKJW01	80	4333	4103	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599121	GCA_000664745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/745/GCA_000664745.1_Myco_tube_M2191_V1	-	M2191
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.07119	37.6	-	MKOY01	28	3097	3008	10/12/16	3/1/17	Contig	University of California at Davis	SAMN03277704	GCA_001760885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/885/GCA_001760885.1_BCW_3886	-	NRRL B-33596
Campylobacter jejuni	197	PRJEB5994	247752	Proteobacteria	delta/epsilon subdivisions	1.66379	30.6	-	CCCZ01	54	1740	1612	9/5/14	3/16/17	Scaffold	UNIVERSITY OF HELSINKI	SAMEA2518389	GCA_000753015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/015/GCA_000753015.1_Ma_1	-	-
Salmonella enterica subsp. enterica serovar Agona str. 400095 11	1072591	PRJNA71291	71291	Proteobacteria	Gammaproteobacteria	4.76735	52.1	-	AYDF01	72	4858	4489	10/31/13	2/26/17	Contig	FDA	SAMN02415168	GCA_000494425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/425/GCA_000494425.1_CFSAN000452_01.0	-	400095 11
Staphylococcus aureus WAMC6071	1409731	PRJNA224053	224053	Terrabacteria group	Firmicutes	2.83333	32.9	-	JBFJ01	14	2965	2805	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381792	GCA_000543005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/005/GCA_000543005.1_Stap_aure_WAMC6071_V1	-	WAMC6071
Staphylococcus aureus HBHO6024	1409732	PRJNA224054	224054	Terrabacteria group	Firmicutes	2.93328	32.8	-	JBFI01	36	3082	2903	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381793	GCA_000543025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/025/GCA_000543025.1_Stap_aure_HBHO6024_V1	-	HBHO6024
Salmonella enterica subsp. enterica serovar Agona str. 246555-3	1072588	PRJNA71285	71285	Proteobacteria	Gammaproteobacteria	4.71886	52.1	-	AYDI01	61	4776	4442	10/31/13	2/26/17	Contig	FDA	SAMN02415171	GCA_000494445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/445/GCA_000494445.1_CFSAN000484_01.0	-	246555-3
Campylobacter jejuni	197	PRJEB5994	247752	Proteobacteria	delta/epsilon subdivisions	1.87026	30.6	-	CCCY01	48	1989	1852	9/5/14	3/16/17	Scaffold	UNIVERSITY OF HELSINKI	SAMEA2518459	GCA_000753095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/095/GCA_000753095.1_1_12S	-	-
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.84977	38	-	MKPF01	14	2866	2800	10/12/16	3/1/17	Contig	University of California at Davis	SAMN03277643	GCA_001761015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/015/GCA_001761015.1_BCW_3893	-	NRRL B-33660
Mycobacterium tuberculosis M2141	1448776	PRJNA235788	235788	Terrabacteria group	Actinobacteria	4.42631	65.6	-	JKJV01	90	4334	4100	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599122	GCA_000664765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/765/GCA_000664765.1_Myco_tube_M2141_V1	-	M2141
Escherichia coli HVH 88 (4-5854636)	1281025	PRJNA186110	186110	Proteobacteria	Gammaproteobacteria	5.38099	50.6	-	AVVJ01	12	5475	5144	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885737	GCA_000457245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/245/GCA_000457245.1_Esch_coli_HVH_88_4-5854636_V1	-	HVH 88 (4-5854636)
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.0885	39.6	-	CMIE01	71	2278	2009	3/23/15	3/11/17	Contig	SC	SAMEA1029417	GCA_001122585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/585/GCA_001122585.1_7038_6_5	-	SMRU2981
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.46132	66.4	-	LLNW01	72	6143	5986	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128557	GCA_001450185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/185/GCA_001450185.1_WH-SGI-V-07372	26604259	WH-SGI-V-07372
Acinetobacter baumannii	470	PRJNA270778	270778	Proteobacteria	Gammaproteobacteria	4.12301	38.9	-	JWRW03	150	4036	3893	12/29/14	3/18/17	Contig	JCVI	SAMN03268800	GCA_000808845.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/845/GCA_000808845.3_Velvet_assembly_of_Acinetobacter_baumannii_ABUH319118	-	ABUH319118
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.17879	35.4	-	CHZB01	21	2239	2100	4/21/15	3/18/17	Scaffold	SC	SAMEA1031459	GCA_001348795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/795/GCA_001348795.1_6630_7_21	-	IT-NI-037
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04167	41.1	-	CDVD01	56	2029	1913	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233853	GCA_000947075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/075/GCA_000947075.1_Velvet_assembly	-	F45W
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.7606	50.6	-	FTYC01	438	5433	4525	1/28/17	2/26/17	Scaffold	SC	SAMEA3356030	GCA_900159065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/065/GCA_900159065.1_16703_8_12	-	3626STDY6095487
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.25282	28.7	-	FUPK01	65	4101	3911	2/14/17	2/23/17	Scaffold	SC	SAMEA3375104	GCA_900165135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/135/GCA_900165135.1_16780_8_38	-	VRECD0148
Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884	667127	PRJEB8211	272595	Proteobacteria	Gammaproteobacteria	5.27823	57.3	-	CDOT01	135	5416	4610	1/20/15	4/21/17	Contig	URMITE	SAMEA3209374	GCA_000827775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/827/775/GCA_000827775.1_Kp_subsp._rhinoscleromatis_Urmite	-	Urmite
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82495	64.1	-	FVLK01	16	4774	4617	3/10/17	3/18/17	Scaffold	SC	SAMEA2259631	GCA_900135745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/745/GCA_900135745.1_11861_7_86	-	826
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.83941	64.1	-	FVLH01	14	4817	4644	3/10/17	3/18/17	Scaffold	SC	SAMEA2259617	GCA_900135755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/755/GCA_900135755.1_11861_7_77	-	812
Klebsiella pneumoniae	573	PRJNA274161	274161	Proteobacteria	Gammaproteobacteria	5.45097	57.3	-	JYBC01	49	5457	5215	3/10/15	2/21/17	Contig	Shanghai Jiao Tong University	SAMN03323314	GCA_000949515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/515/GCA_000949515.1_ASM94951v1	-	DSM 2026
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.11674	28.6	-	FUPL01	39	3825	3669	2/14/17	2/23/17	Scaffold	SC	SAMEA3375105	GCA_900165145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/145/GCA_900165145.1_16780_8_39	-	VRECD0149
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.86534	50.5	-	FTYB01	442	5737	4639	1/28/17	2/26/17	Scaffold	SC	SAMEA3356031	GCA_900159075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/075/GCA_900159075.1_16703_8_13	-	3626STDY6095488
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04226	41.2	-	CDXC01	52	2025	1924	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234033	GCA_000947095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/095/GCA_000947095.1_Velvet_assembly	-	S1K
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.10848	35.3	-	CGBT01	9	2170	2065	3/15/15	3/18/17	Scaffold	SC	SAMEA1031464	GCA_001348815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/815/GCA_001348815.1_6630_6_18	-	DE-NI-012
Acinetobacter baumannii	470	PRJNA270778	270778	Proteobacteria	Gammaproteobacteria	4.18957	39	-	JWRX01	133	-	-	-	-	Contig	JCVI	SAMN03268802	GCA_000808865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/865/GCA_000808865.1_ASM80886v1	-	ABUH433132
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.35258	66.5	-	LLNZ01	56	6064	5909	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128560	GCA_001450225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/225/GCA_001450225.1_WH-SGI-V-07375	26604259	WH-SGI-V-07375
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.10278	39.5	-	CNRC02	153	2302	2086	3/23/15	3/5/17	Contig	SC	SAMEA1032408	GCA_001122665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/665/GCA_001122665.2_6999_1_12	-	R34-3195
Escherichia coli HVH 89 (4-5885604)	1281026	PRJNA186111	186111	Proteobacteria	Gammaproteobacteria	5.18371	50.4	-	AVVK01	9	5290	4933	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885738	GCA_000457265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/265/GCA_000457265.1_Esch_coli_HVH_89_4-5885604_V1	-	HVH 89 (4-5885604)
Mycobacterium tuberculosis M2343	1448778	PRJNA235790	235790	Terrabacteria group	Actinobacteria	4.42399	65.6	-	JKJT01	75	4322	4099	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599124	GCA_000664785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/785/GCA_000664785.1_Myco_tube_M2343_V1	-	M2343
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.88287	38.1	-	MKPG01	12	2910	2840	10/12/16	3/1/17	Contig	University of California at Davis	SAMN03277644	GCA_001761045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/045/GCA_001761045.1_BCW_3894	-	NRRL B-33665
Campylobacter jejuni	197	PRJEB5994	247752	Proteobacteria	delta/epsilon subdivisions	1.68461	30.7	-	CCDC01	60	1751	1611	9/6/14	3/16/17	Scaffold	UNIVERSITY OF HELSINKI	SAMEA2518416	GCA_000753175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/175/GCA_000753175.1_Le_755	-	-
Salmonella enterica subsp. enterica serovar Agona str. 392869-1	1072589	PRJNA71287	71287	Proteobacteria	Gammaproteobacteria	4.76545	52.1	-	AYDH01	76	4864	4456	10/31/13	2/26/17	Contig	FDA	SAMN02415170	GCA_000494465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/465/GCA_000494465.1_CFSAN000470_01.0	-	392869-1
Staphylococcus aureus KINW6056	1409733	PRJNA224055	224055	Terrabacteria group	Firmicutes	2.89877	32.8	-	JBFH01	47	3052	2850	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381794	GCA_000543045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/045/GCA_000543045.1_Stap_aure_KINW6056_V1	-	KINW6056
Staphylococcus aureus KINW6058	1409734	PRJNA224056	224056	Terrabacteria group	Firmicutes	2.93837	32.8	-	JBFG01	18	3085	2907	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381795	GCA_000543065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/065/GCA_000543065.1_Stap_aure_KINW6058_V1	-	KINW6058
Salmonella enterica subsp. enterica serovar Agona str. 400095 14	1072593	PRJNA71295	71295	Proteobacteria	Gammaproteobacteria	4.76856	52.1	-	AYDD01	41	4842	4523	10/31/13	2/26/17	Contig	FDA	SAMN02415166	GCA_000494505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/505/GCA_000494505.1_CFSAN000454_01.0	-	400095 14
Campylobacter jejuni	197	PRJEB5994	247752	Proteobacteria	delta/epsilon subdivisions	1.67578	30.8	-	CCDA01	73	1753	1570	9/5/14	3/16/17	Scaffold	UNIVERSITY OF HELSINKI	SAMEA2518457	GCA_000753295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/295/GCA_000753295.1_Po_1	-	-
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.83927	38.1	-	MJNH01	11	2845	2778	9/29/16	3/1/17	Contig	University of California at Davis	SAMN03359261	GCA_001825795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/795/GCA_001825795.1_ASM182579v1	-	BCW_3909
Mycobacterium tuberculosis M2342	1448779	PRJNA235791	235791	Terrabacteria group	Actinobacteria	4.42431	65.6	-	JKJS01	69	4342	4111	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599125	GCA_000664805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/805/GCA_000664805.1_Myco_tube_M2342_V1	-	M2342
Escherichia coli HVH 90 (4-3191362)	1281027	PRJNA186112	186112	Proteobacteria	Gammaproteobacteria	5.179	50.6	-	AVVL01	5	5348	5006	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885739	GCA_000457285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/285/GCA_000457285.1_Esch_coli_HVH_90_4-3191362_V1	-	HVH 90 (4-3191362)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12693	39.6	-	CNNG02	193	2305	2107	3/23/15	3/11/17	Contig	SC	SAMEA1032417	GCA_001122685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/685/GCA_001122685.2_6925_1_54	-	R34-3035
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.4005	66.4	-	LLOB01	37	6057	5903	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128562	GCA_001450245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/245/GCA_001450245.1_WH-SGI-V-07377	26604259	WH-SGI-V-07377
Acinetobacter baumannii	470	PRJNA270778	270778	Proteobacteria	Gammaproteobacteria	3.79014	38.9	-	JWRY03	212	3681	3541	12/29/14	3/18/17	Contig	JCVI	SAMN03268798	GCA_000808885.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/885/GCA_000808885.3_Velvet_assembly_of_Acinetobacter_baumannii_ABUH497144	-	ABUH497144
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.08276	35.5	-	CGBF01	35	2127	1995	3/15/15	3/18/17	Scaffold	SC	SAMEA1031466	GCA_001348835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/835/GCA_001348835.1_6630_7_8	-	IT-NI-007
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.07726	41.2	-	CDTR01	55	2073	1976	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233807	GCA_000947255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/255/GCA_000947255.1_Velvet_assembly	-	E00K
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.96641	50.4	-	FTYD01	459	5679	4790	1/28/17	2/26/17	Scaffold	SC	SAMEA3356032	GCA_900159085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/085/GCA_900159085.1_16703_8_14	-	3626STDY6095489
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.40599	28.5	-	FUPM01	49	4242	4031	2/14/17	2/23/17	Scaffold	SC	SAMEA3375106	GCA_900165155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/155/GCA_900165155.1_16780_8_40	-	VRECD0150
Klebsiella pneumoniae	573	PRJNA258326	258326	Proteobacteria	Gammaproteobacteria	5.35939	57.3	-	JQCX01	116	5343	5119	3/19/15	2/21/17	Contig	CDPH	SAMN02996353	GCA_000956385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/385/GCA_000956385.1_CDPH3707-4	25977423	CDPH3707
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.43311	64	-	FSHU01	24	5514	5324	12/14/16	3/21/17	Scaffold	SC	SAMEA2259613	GCA_900135765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/765/GCA_900135765.1_11861_7_73	-	808
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.07766	64.2	-	FSHV01	19	5068	4946	12/14/16	3/21/17	Scaffold	SC	SAMEA2259620	GCA_900135775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/775/GCA_900135775.1_11861_7_80	-	815
Klebsiella pneumoniae	573	PRJNA258325	258325	Proteobacteria	Gammaproteobacteria	5.46835	57.1	-	JQCW01	93	5468	5229	3/19/15	2/21/17	Contig	California Department of Public Health	SAMN02996352	GCA_000956395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/395/GCA_000956395.1_CDPH_3020-4	25977423	CDPH3020
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.21505	28.6	-	FUPN01	35	4052	3858	2/14/17	2/23/17	Scaffold	SC	SAMEA3375107	GCA_900165165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/165/GCA_900165165.1_16780_8_41	-	VRECD0151
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.95392	50.5	-	FTYE01	432	5680	4796	1/28/17	2/26/17	Scaffold	SC	SAMEA3356033	GCA_900159095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/095/GCA_900159095.1_16703_8_15	-	3626STDY6095490
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.1322	41.1	-	CEBW01	58	2128	2033	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234103	GCA_000947335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/335/GCA_000947335.1_Velvet_assembly	-	V22C
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	1.92973	35.3	-	CIJH01	16	1965	1854	4/21/15	3/18/17	Scaffold	SC	SAMEA1031479	GCA_001348855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/855/GCA_001348855.1_6630_5_9	-	DK-NI-005
Acinetobacter baumannii	470	PRJNA270778	270778	Proteobacteria	Gammaproteobacteria	4.15937	39	-	JWSA03	113	4054	3924	12/29/14	3/18/17	Contig	JCVI	SAMN03268796	GCA_000808905.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/905/GCA_000808905.3_Velvet_assembly_of_Acinetobacter_baumannii_ABUH504238	-	ABUH504238
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.48996	65.4	-	LLOC01	199	7352	7062	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128563	GCA_001450265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/265/GCA_001450265.1_WH-SGI-V-07378	26604259	WH-SGI-V-07378
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08321	39.7	-	CLFF01	71	2299	2085	3/21/15	3/11/17	Contig	SC	SAMEA1026143	GCA_001122705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/705/GCA_001122705.1_6899_7_15	-	SMRU2103
Escherichia coli HVH 91 (4-4638751)	1281028	PRJNA186113	186113	Proteobacteria	Gammaproteobacteria	4.69677	50.8	-	AVVM01	13	4819	4418	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885740	GCA_000457305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/305/GCA_000457305.1_Esch_coli_HVH_91_4-4638751_V1	-	HVH 91 (4-4638751)
Mycobacterium tuberculosis M2324	1448780	PRJNA235792	235792	Terrabacteria group	Actinobacteria	4.41768	65.6	-	JKJR01	76	4331	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599126	GCA_000664825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/825/GCA_000664825.1_Myco_tube_M2324_V1	-	M2324
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.87552	37.9	-	MJNN01	20	2883	2814	9/29/16	3/1/17	Contig	University of California at Davis	SAMN03359267	GCA_001825905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/905/GCA_001825905.1_ASM182590v1	-	BCW_3915
Campylobacter jejuni subsp. jejuni	32022	PRJNA273815	273815	Proteobacteria	delta/epsilon subdivisions	1.65538	30.6	-	JYEC01	61	1724	1580	3/4/15	3/16/17	Scaffold	Laboratory of Food microbiology and Immunology	SAMN03299123	GCA_000943385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/385/GCA_000943385.1_ASM94338v1	25908133	P10-2209
Salmonella enterica subsp. enterica serovar Cubana str. CVM42234	1314885	PRJNA196159	196159	Proteobacteria	Gammaproteobacteria	4.97435	52.2	-	ATEU01	97	5078	4818	11/27/13	2/26/17	Contig	FDA	SAMN02053837	GCA_000500025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/025/GCA_000500025.1_ASM50002v1	24459266	CVM42234
Staphylococcus aureus UCIM6145	1409737	PRJNA224059	224059	Terrabacteria group	Firmicutes	2.97092	32.7	-	JBFD01	16	3144	2977	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381798	GCA_000543085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/085/GCA_000543085.1_Stap_aure_UCIM6145_V1	-	UCIM6145
Staphylococcus aureus UCIM6144	1409738	PRJNA224060	224060	Terrabacteria group	Firmicutes	2.93512	32.7	-	JBFC01	12	3112	2947	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381799	GCA_000543105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/105/GCA_000543105.1_Stap_aure_UCIM6144_V1	-	UCIM6144
Salmonella enterica subsp. enterica serovar Typhimurium var. Copenhagen str. 0084	1173929	PRJNA161785	161785	Proteobacteria	Gammaproteobacteria	5.1033	52.1	-	AYVJ01	217	5392	5015	12/10/13	2/26/17	Contig	FDA	SAMN01813959	GCA_000505085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/085/GCA_000505085.1_CFSAN001284_01.0	-	84
Campylobacter jejuni subsp. jejuni	32022	PRJNA273794	273794	Proteobacteria	delta/epsilon subdivisions	1.72774	30.6	-	JYDX01	122	1813	1653	3/4/15	3/16/17	Scaffold	"Laboratory of Food microbiology and Immunology, Obihiro University of Agri. & Vet. Medicine"	SAMN03296045	GCA_000943395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/395/GCA_000943395.1_ASM94339v1	25908133	C1-5523
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.99914	37.8	-	MJNO01	18	3033	2959	9/29/16	3/1/17	Contig	University of California at Davis	SAMN03359268	GCA_001825935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/935/GCA_001825935.1_ASM182593v1	-	BCW_3916
Mycobacterium tuberculosis M2323	1448781	PRJNA235793	235793	Terrabacteria group	Actinobacteria	4.41333	65.6	-	JKJQ01	75	4332	4098	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599127	GCA_000664845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/845/GCA_000664845.1_Myco_tube_M2323_V1	-	M2323
Escherichia coli HVH 92 (4-5930790)	1281029	PRJNA186114	186114	Proteobacteria	Gammaproteobacteria	5.39806	50.3	-	AVVN01	10	5493	5064	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885741	GCA_000457325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/325/GCA_000457325.1_Esch_coli_HVH_92_4-5930790_V1	-	HVH 92 (4-5930790)
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.20339	39.4	-	CMGA01	85	2446	2186	3/23/15	3/11/17	Contig	SC	SAMEA1029185	GCA_001122845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/845/GCA_001122845.1_7038_4_14	-	SMRU2942
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.38611	66.4	-	LLOE01	111	6078	5893	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128565	GCA_001450305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/305/GCA_001450305.1_WH-SGI-V-07380	26604259	WH-SGI-V-07380
Acinetobacter baumannii	470	PRJNA270778	270778	Proteobacteria	Gammaproteobacteria	4.11787	39.1	-	JWSB03	219	4026	3875	12/29/14	3/18/17	Contig	JCVI	SAMN03268797	GCA_000808925.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/925/GCA_000808925.3_Velvet_assembly_of_Acinetobacter_baumannii_ABUH80286	-	ABUH80286
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.08233	35.5	-	CHDP01	33	2147	2007	4/21/15	3/18/17	Scaffold	SC	SAMEA1031487	GCA_001348875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/875/GCA_001348875.1_6630_7_13	-	IT-NI-019
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.06832	41.2	-	CDWX01	61	2058	1952	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233870	GCA_000947395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/395/GCA_000947395.1_Velvet_assembly	-	F9O
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.78161	50.6	-	FTYF01	428	5436	4553	1/28/17	2/26/17	Scaffold	SC	SAMEA3356034	GCA_900159105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/105/GCA_900159105.1_16703_8_16	-	3626STDY6095491
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.20814	28.6	-	FUPO01	40	4004	3854	2/14/17	2/23/17	Scaffold	SC	SAMEA3375108	GCA_900165175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/175/GCA_900165175.1_16780_8_42	-	VRECD0152
Klebsiella pneumoniae	573	PRJNA278890	278890	Proteobacteria	Gammaproteobacteria	5.36819	57.4	-	LAFX01	58	5351	5131	3/20/15	2/21/17	Contig	CDPH	SAMN02996353	GCA_000958955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/955/GCA_000958955.1_matepair02	25977423	CDPH3707
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.93346	64.1	-	FSHW01	18	4940	4768	12/14/16	5/22/17	Scaffold	SC	SAMEA2259625	GCA_900135785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/785/GCA_900135785.1_11861_8_12	-	820
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.97366	64.1	-	FVAD01	15	4957	4802	3/10/17	3/18/17	Scaffold	SC	SAMEA2259637	GCA_900135795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/795/GCA_900135795.1_11861_7_92	-	832
Klebsiella pneumoniae	573	PRJNA278889	278889	Proteobacteria	Gammaproteobacteria	5.49446	57.1	-	LAFV01	68	5486	5248	3/20/15	2/21/17	Contig	CDPH	SAMN02996352	GCA_000958975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/975/GCA_000958975.1_matepair01	25977423	CDPH3020
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.14783	28.8	-	FUPP01	38	3890	3715	2/14/17	2/23/17	Scaffold	SC	SAMEA3375109	GCA_900165185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/185/GCA_900165185.1_16780_8_43	-	VRECD0154
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.84195	50.6	-	FTYG01	426	5543	4604	1/28/17	2/26/17	Scaffold	SC	SAMEA3356036	GCA_900159115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/115/GCA_900159115.1_16703_8_18	-	3626STDY6095493
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05532	41.1	-	CEBR01	55	2040	1947	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234068	GCA_000947475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/475/GCA_000947475.1_Velvet_assembly	-	type strain: S7
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.05515	35.3	-	CHYX01	16	2137	2027	4/21/15	3/18/17	Scaffold	SC	SAMEA1031489	GCA_001348895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/895/GCA_001348895.1_6630_5_2	-	BE-NI-005
Acinetobacter baumannii	470	PRJNA270778	270778	Proteobacteria	Gammaproteobacteria	4.19071	39	-	JWSC03	132	4093	3953	12/29/14	3/18/17	Contig	JCVI	SAMN03268805	GCA_000808945.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/945/GCA_000808945.3_Velvet_assembly_of_Acinetobacter_baumannii_ABUH518307	-	ABUH518307
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.37018	66.5	-	LLKW01	66	6071	5919	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128479	GCA_001450325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/325/GCA_001450325.1_WH-SGI-V-07056	26604259	WH-SGI-V-07056
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.094	39.6	-	CNQF02	189	2267	2052	3/22/15	3/11/17	Contig	SC	SAMEA1032735	GCA_001122905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/905/GCA_001122905.2_6952_7_15	-	R34-3175
Escherichia coli HVH 95 (4-6074464)	1281031	PRJNA186116	186116	Proteobacteria	Gammaproteobacteria	5.241	50.4	-	AVVO01	18	5413	5006	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885743	GCA_000457345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/345/GCA_000457345.1_Esch_coli_HVH_95_4-6074464_V1	-	HVH 95 (4-6074464)
Mycobacterium tuberculosis M2278	1448783	PRJNA235795	235795	Terrabacteria group	Actinobacteria	4.41379	65.6	-	JKJP01	72	4314	4098	4/29/14	3/11/17	Scaffold	Broad Institute	SAMN02599129	GCA_000664865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/865/GCA_000664865.1_Myco_tube_M2278_V1	-	M2278
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.90632	37.9	-	MJNT01	21	2925	2852	9/29/16	3/1/17	Contig	University of California at Davis	SAMN03359273	GCA_001826025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/025/GCA_001826025.1_ASM182602v1	-	BCW_3921
Campylobacter jejuni subsp. jejuni	32022	PRJNA273808	273808	Proteobacteria	delta/epsilon subdivisions	1.77277	30.1	-	JYDY01	77	1889	1727	3/4/15	3/16/17	Scaffold	"Laboratory of Food microbiology and Immunology, Obihiro University of Agri. & Vet. Medicine"	SAMN03299058	GCA_000943435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/435/GCA_000943435.1_ASM94343v1	25908133	C10-448
Salmonella enterica subsp. enterica serovar Enteritidis str. 3402	1173817	PRJNA161365	161365	Proteobacteria	Gammaproteobacteria	4.91275	52.1	-	AYVI01	191	5143	4795	12/10/13	2/26/17	Contig	FDA	SAMN01813925	GCA_000505105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/105/GCA_000505105.1_CFSAN001333_01.0	-	3402
Staphylococcus aureus KINW6066	1409739	PRJNA224061	224061	Terrabacteria group	Firmicutes	2.9018	32.8	-	JBFB01	39	3057	2865	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381800	GCA_000543125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/125/GCA_000543125.1_Stap_aure_KINW6066_V1	-	KINW6066
Staphylococcus aureus PLAC6055	1409740	PRJNA224062	224062	Terrabacteria group	Firmicutes	2.89338	32.8	-	JBFA01	15	3034	2867	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381801	GCA_000543145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/145/GCA_000543145.1_Stap_aure_PLAC6055_V1	-	PLAC6055
Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001587	1410918	PRJNA224209	224209	Proteobacteria	Gammaproteobacteria	4.69913	52.1	-	AYVG01	71	4808	4531	12/10/13	2/26/17	Contig	FDA	SAMN02383557	GCA_000505145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/145/GCA_000505145.1_CFSAN001587_01.0	-	CFSAN001587
Campylobacter jejuni subsp. jejuni	32022	PRJNA273809	273809	Proteobacteria	delta/epsilon subdivisions	1.74798	30.3	-	JYDZ01	78	1850	1704	3/4/15	3/16/17	Scaffold	Laboratory of Food microbiology and Immunology	SAMN03299096	GCA_000943445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/445/GCA_000943445.1_ASM94344v1	25908133	C12-5524
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.15984	37.8	-	MJPD01	49	3205	3121	9/29/16	3/2/17	Contig	University of California at Davis	SAMN03357990	GCA_001826685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/685/GCA_001826685.1_ASM182668v1	-	BCW_4262
Mycobacterium tuberculosis M2277	1448784	PRJNA235796	235796	Terrabacteria group	Actinobacteria	4.40798	65.6	-	JKJO01	76	4320	4099	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599130	GCA_000664885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/885/GCA_000664885.1_Myco_tube_M2277_V1	-	M2277
Escherichia coli HVH 96 (4-5934869)	1281032	PRJNA186117	186117	Proteobacteria	Gammaproteobacteria	5.34461	50.4	-	AVVP01	12	5479	5059	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885744	GCA_000457385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/385/GCA_000457385.1_Esch_coli_HVH_96_4-5934869_V1	-	HVH 96 (4-5934869)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.11055	39.6	-	COEH02	199	2289	2068	3/23/15	3/15/17	Contig	SC	SAMEA1463258	GCA_001122985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/985/GCA_001122985.2_7622_4_48	-	MD5030
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.62218	66.2	-	LLLI01	116	6304	6098	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128491	GCA_001450425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/425/GCA_001450425.1_WH-SGI-V-07054	26604259	WH-SGI-V-07054
Acinetobacter baumannii	470	PRJNA270778	270778	Proteobacteria	Gammaproteobacteria	3.87474	39	-	JWSE03	341	3847	3613	12/29/14	3/18/17	Contig	JCVI	SAMN03268806	GCA_000808985.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/808/985/GCA_000808985.3_Velvet_assembly_of_Acinetobacter_baumannii_ABUH463346	-	ABUH463346
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.01682	35.2	-	CGBZ01	16	2087	1970	3/15/15	3/18/17	Scaffold	SC	SAMEA1031494	GCA_001348915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/915/GCA_001348915.1_6630_6_20	-	DE-NI-014
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.05946	41.1	-	CEBJ01	56	2047	1954	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234122	GCA_000947515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/515/GCA_000947515.1_Velvet_assembly	-	V38X
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.80655	50.5	-	FTYH01	417	5475	4595	1/28/17	2/26/17	Scaffold	SC	SAMEA3356037	GCA_900159125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/125/GCA_900159125.1_16703_8_19	-	3626STDY6095494
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.1631	28.6	-	FUPQ01	29	3933	3758	2/14/17	2/23/17	Scaffold	SC	SAMEA3375110	GCA_900165195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/195/GCA_900165195.1_16780_8_44	-	VRECD0155
Klebsiella pneumoniae MRSN 2404	1409962	PRJNA223625	223625	Proteobacteria	Gammaproteobacteria	5.42378	57	-	LBIK01	47	5504	5227	4/29/15	2/21/17	Contig	J. Craig Venter Institute	SAMN03486512	GCA_000981955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/955/GCA_000981955.1_ASM98195v1	-	MRSN 2404
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.03891	64.1	-	FVLT01	13	5050	4933	3/10/17	3/18/17	Scaffold	SC	SAMEA2259660	GCA_900135805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/805/GCA_900135805.1_11893_6_21	-	855
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.13535	64.1	-	FSHX01	23	5156	5012	12/14/16	3/21/17	Scaffold	SC	SAMEA2259550	GCA_900135815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/815/GCA_900135815.1_11861_8_3	-	745
Klebsiella pneumoniae MRSN 6902	1409965	PRJNA223626	223626	Proteobacteria	Gammaproteobacteria	5.58739	57.2	-	LBLU01	70	5709	5437	4/29/15	2/21/17	Contig	J. Craig Venter Institute	SAMN03486513	GCA_000982045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/045/GCA_000982045.1_ASM98204v1	-	MRSN 6902
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.22212	28.7	-	FUPR01	33	3972	3787	2/14/17	2/23/17	Scaffold	SC	SAMEA3375111	GCA_900165205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/205/GCA_900165205.1_16780_8_45	-	VRECD0156
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.81413	50.6	-	FTYI01	435	5494	4586	1/28/17	2/26/17	Scaffold	SC	SAMEA3356038	GCA_900159135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/135/GCA_900159135.1_16703_8_20	-	3626STDY6095495
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04697	41.1	-	CDWS01	65	2044	1930	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233862	GCA_000947575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/575/GCA_000947575.1_Velvet_assembly	-	F57E
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.00346	35.4	-	CGCL01	32	2030	1881	3/15/15	3/18/17	Scaffold	SC	SAMEA1031505	GCA_001348935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/935/GCA_001348935.1_6630_7_14	-	IT-NI-020
Acinetobacter baumannii	470	PRJNA270778	270778	Proteobacteria	Gammaproteobacteria	4.04073	39	-	JWSF03	141	3929	3807	12/29/14	3/18/17	Contig	JCVI	SAMN03268809	GCA_000809005.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/005/GCA_000809005.3_Velvet_assembly_of_Acinetobacter_baumannii_ABUH304350	-	ABUH304350
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.40618	66.1	-	LLLL01	110	6136	5913	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128494	GCA_001450435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/435/GCA_001450435.1_WH-SGI-V-07061	26604259	WH-SGI-V-07061
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.12649	39.7	-	CMTN01	65	2289	1991	3/23/15	3/11/17	Contig	SC	SAMEA1022852	GCA_001123025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/025/GCA_001123025.1_5737_2_6	-	381
Escherichia coli HVH 100 (4-2850729)	1281036	PRJNA186121	186121	Proteobacteria	Gammaproteobacteria	5.2743	50.5	-	AVVQ01	7	5484	5117	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885748	GCA_000457405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/405/GCA_000457405.1_Esch_coli_HVH_100_4-2850729_V1	-	HVH 100 (4-2850729)
Mycobacterium tuberculosis M2276	1448785	PRJNA235797	235797	Terrabacteria group	Actinobacteria	4.4118	65.6	-	JKJN01	78	4323	4098	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599131	GCA_000664905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/905/GCA_000664905.1_Myco_tube_M2276_V1	-	M2276
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.04481	37.8	-	MJPJ01	34	3096	3018	9/29/16	3/1/17	Contig	University of California at Davis	SAMN03357996	GCA_001826815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/815/GCA_001826815.1_ASM182681v1	-	BCW_4268
Campylobacter jejuni subsp. jejuni	32022	PRJNA273812	273812	Proteobacteria	delta/epsilon subdivisions	1.67042	30.8	-	JYEA01	68	1720	1589	3/4/15	3/16/17	Scaffold	Laboratory of Food microbiology and Immunology	SAMN03299097	GCA_000943475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/475/GCA_000943475.1_ASM94347v1	25908133	P3-2209
Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001590	1410920	PRJNA224211	224211	Proteobacteria	Gammaproteobacteria	4.69943	52.1	-	AYVD01	74	4817	4535	12/10/13	2/26/17	Contig	FDA	SAMN02383559	GCA_000505165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/165/GCA_000505165.1_CFSAN001590_01.0	-	CFSAN001590
Staphylococcus aureus UCIM6147	1409742	PRJNA224064	224064	Terrabacteria group	Firmicutes	2.98426	32.7	-	JBEY01	20	3172	3010	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381803	GCA_000543165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/165/GCA_000543165.1_Stap_aure_UCIM6147_V1	-	UCIM6147
Staphylococcus aureus WAMC6080	1409743	PRJNA224065	224065	Terrabacteria group	Firmicutes	2.90741	32.7	-	JBEX01	25	3088	2923	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381804	GCA_000543185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/185/GCA_000543185.1_Stap_aure_WAMC6080_V1	-	WAMC6080
Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001669	1410921	PRJNA224212	224212	Proteobacteria	Gammaproteobacteria	4.68299	52.2	-	AYVC01	97	4802	4515	12/10/13	2/26/17	Contig	FDA	SAMN02383560	GCA_000505185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/185/GCA_000505185.1_CFSAN001669_01.0	-	CFSAN001669
Campylobacter jejuni subsp. jejuni	32022	PRJNA273813	273813	Proteobacteria	delta/epsilon subdivisions	1.65872	30.6	-	JYEB01	48	1714	1583	3/4/15	3/16/17	Scaffold	Laboratory of Food microbiology and Immunology	SAMN03299098	GCA_000943485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/485/GCA_000943485.1_ASM94348v1	25908133	P5-2209
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.09217	37.8	-	MJPP01	29	3176	3095	9/29/16	3/1/17	Contig	University of California at Davis	SAMN03358002	GCA_001826925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/925/GCA_001826925.1_ASM182692v1	-	BCW_4274
Mycobacterium tuberculosis M2259	1448786	PRJNA235798	235798	Terrabacteria group	Actinobacteria	4.43288	65.6	-	JKJM01	74	4332	4119	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599132	GCA_000664925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/925/GCA_000664925.1_Myco_tube_M2259_V1	-	M2259
Escherichia coli HVH 103 (4-5904188)	1281039	PRJNA186124	186124	Proteobacteria	Gammaproteobacteria	5.14182	50.5	-	AVVS01	15	5258	4903	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885751	GCA_000457435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/435/GCA_000457435.1_Esch_coli_HVH_103_4-5904188_V1	-	HVH 103 (4-5904188)
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.03673	39.6	-	CRTK01	72	2265	2049	3/23/15	3/11/17	Contig	SC	SAMEA1025332	GCA_001123145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/145/GCA_001123145.1_6805_4_21	-	SMRU1677
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.336	66.7	-	LLLN01	87	6023	5746	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128496	GCA_001450465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/465/GCA_001450465.1_WH-SGI-V-07064	26604259	WH-SGI-V-07064
Acinetobacter baumannii	470	PRJNA270778	270778	Proteobacteria	Gammaproteobacteria	4.01826	39	-	JWSH03	124	3910	3792	12/29/14	3/18/17	Contig	JCVI	SAMN03268807	GCA_000809045.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/045/GCA_000809045.3_Velvet_assembly_of_Acinetobacter_baumannii_ABUH304352	-	ABUH304352
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.06202	35.3	-	CIJL01	14	2130	2013	4/21/15	3/18/17	Scaffold	SC	SAMEA1031507	GCA_001348955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/955/GCA_001348955.1_6630_8_8	-	CZ-NI-013
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.06563	41.1	-	CEBF01	61	2055	1960	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234120	GCA_000947595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/595/GCA_000947595.1_Velvet_assembly	-	V37W
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.95158	50.4	-	FTYJ01	442	5709	4783	1/28/17	2/26/17	Scaffold	SC	SAMEA3356039	GCA_900159145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/145/GCA_900159145.1_16703_8_21	-	3626STDY6095496
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.39761	28.5	-	FUPS01	54	4213	4026	2/14/17	2/23/17	Scaffold	SC	SAMEA3375112	GCA_900165215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/215/GCA_900165215.1_16780_8_46	-	VRECD0157
Klebsiella pneumoniae HE12	1409966	PRJNA223623	223623	Proteobacteria	Gammaproteobacteria	5.25913	57.6	-	LBLV01	42	5267	5041	4/29/15	2/21/17	Contig	J. Craig Venter Institute	SAMN03486511	GCA_000982085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/085/GCA_000982085.1_ASM98208v1	-	HE12
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.1441	64	-	FVLM01	24	5179	5042	3/10/17	3/18/17	Scaffold	SC	SAMEA2259663	GCA_900135825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/825/GCA_900135825.1_11861_8_17	-	858
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82051	64.2	-	FVLR01	10	4818	4672	3/10/17	3/18/17	Scaffold	SC	SAMEA2259661	GCA_900135835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/835/GCA_900135835.1_11893_6_22	-	856
Klebsiella pneumoniae MRSN 3852	1409964	PRJNA223635	223635	Proteobacteria	Gammaproteobacteria	5.50434	57.2	-	LBID01	37	5538	5293	4/29/15	2/21/17	Contig	J. Craig Venter Institute	SAMN03486520	GCA_000982205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/205/GCA_000982205.1_ASM98220v1	-	MRSN 3852
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.18596	28.2	-	FUPU01	30	3894	3759	2/14/17	2/23/17	Scaffold	SC	SAMEA3375131	GCA_900165225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/225/GCA_900165225.1_16780_8_65	-	VRECD0063
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.83948	50.6	-	FTYK01	452	5536	4604	1/28/17	2/26/17	Scaffold	SC	SAMEA3356040	GCA_900159155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/155/GCA_900159155.1_16703_8_22	-	3626STDY6095497
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03879	41.2	-	CDUN01	68	2019	1925	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233831	GCA_000947615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/615/GCA_000947615.1_Velvet_assembly	-	E55E
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.18122	35.4	-	CHYW01	15	2231	2107	4/21/15	3/18/17	Scaffold	SC	SAMEA1031508	GCA_001348975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/975/GCA_001348975.1_6630_6_5	-	BG-NI-007
Acinetobacter baumannii	470	PRJNA270778	270778	Proteobacteria	Gammaproteobacteria	3.99715	39	-	JWSI03	209	3911	3773	12/29/14	3/18/17	Contig	JCVI	SAMN03268811	GCA_000809065.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/065/GCA_000809065.3_Velvet_assembly_of_Acinetobacter_baumannii_ABUH524354	-	ABUH524354
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.10766	66	-	LLLS01	83	6856	6576	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128501	GCA_001450485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/485/GCA_001450485.1_WH-SGI-V-07059	26604259	WH-SGI-V-07059
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.04953	39.7	-	CMRS01	38	2239	1974	3/23/15	3/11/17	Contig	SC	SAMEA2062175	GCA_001123165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/165/GCA_001123165.1_9803_8_50	-	type strain: N
Escherichia coli HVH 104 (4-6977960)	1281040	PRJNA186125	186125	Proteobacteria	Gammaproteobacteria	5.36177	50.6	-	AVVT01	14	5562	5214	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885752	GCA_000457455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/455/GCA_000457455.1_Esch_coli_HVH_104_4-6977960_V1	-	HVH 104 (4-6977960)
Mycobacterium tuberculosis M2249	1448787	PRJNA235799	235799	Terrabacteria group	Actinobacteria	4.41082	65.6	-	JKJL01	70	4319	4098	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599133	GCA_000664945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/945/GCA_000664945.1_Myco_tube_M2249_V1	-	M2249
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.05356	37.9	-	MJPX01	19	3105	3040	9/29/16	3/2/17	Contig	University of California at Davis	SAMN03358010	GCA_001827115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/115/GCA_001827115.1_ASM182711v1	-	BCW_4282
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66379	30.4	-	CURR01	15	1753	1654	3/31/15	3/18/17	Scaffold	SC	SAMEA1010388	GCA_001224105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/105/GCA_001224105.1_7092_1_74	-	OXC6521
Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001671	1410923	PRJNA224215	224215	Proteobacteria	Gammaproteobacteria	4.69698	52.1	-	AYVA01	76	4809	4541	12/10/13	2/26/17	Contig	FDA	SAMN02383562	GCA_000505205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/205/GCA_000505205.1_CFSAN001671_01.0	-	CFSAN001671
Staphylococcus aureus GGMC6043	1409774	PRJNA224076	224076	Terrabacteria group	Firmicutes	2.85359	32.8	-	JBEV01	40	2977	2818	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381833	GCA_000543205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/205/GCA_000543205.1_Stap_aure_GGMC6043_V1	-	GGMC6043
Staphylococcus aureus WAMC6086	1409777	PRJNA224079	224079	Terrabacteria group	Firmicutes	2.799	32.8	-	JBES01	23	2868	2722	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381836	GCA_000543225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/225/GCA_000543225.1_Stap_aure_WAMC6086_V1	-	WAMC6086
Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001673	1410924	PRJNA224216	224216	Proteobacteria	Gammaproteobacteria	4.69043	52.1	-	AYUZ01	79	4801	4514	12/10/13	2/26/17	Contig	FDA	SAMN02383563	GCA_000505225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/225/GCA_000505225.1_CFSAN001673_01.0	-	CFSAN001673
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69498	30.4	-	CUKN01	15	1787	1693	3/31/15	3/18/17	Scaffold	SC	SAMEA1010640	GCA_001224125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/125/GCA_001224125.1_7038_3_79	-	OXC6329
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.0803	37.8	-	MJQJ01	48	3157	3073	9/29/16	3/1/17	Contig	University of California at Davis	SAMN03358023	GCA_001827335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/335/GCA_001827335.1_ASM182733v1	-	BCW_4295
Mycobacterium tuberculosis M2142	1448788	PRJNA235800	235800	Terrabacteria group	Actinobacteria	4.42487	65.6	-	JKJK01	79	4315	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599134	GCA_000664965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/965/GCA_000664965.1_Myco_tube_M2142_V1	-	M2142
Escherichia coli HVH 106 (4-6881831)	1281042	PRJNA186127	186127	Proteobacteria	Gammaproteobacteria	5.32421	50.8	-	AVVU01	12	5531	5209	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885754	GCA_000457475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/475/GCA_000457475.1_Esch_coli_HVH_106_4-6881831_V1	-	HVH 106 (4-6881831)
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.04545	39.7	-	CLTS01	57	2255	2039	3/21/15	3/11/17	Contig	SC	SAMEA1029059	GCA_001123265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/265/GCA_001123265.1_6972_5_21	-	SMRU2637
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.81345	66	-	LLLZ01	119	6526	6291	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128508	GCA_001450505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/505/GCA_001450505.1_WH-SGI-V-07170	26604259	WH-SGI-V-07170
Acinetobacter baumannii	470	PRJNA270778	270778	Proteobacteria	Gammaproteobacteria	3.8344	38.9	-	JWSJ03	273	3739	3553	12/29/14	3/18/17	Contig	JCVI	SAMN03268808	GCA_000809085.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/085/GCA_000809085.3_Velvet_assembly_of_Acinetobacter_baumannii_ABUH404571	-	ABUH404571
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.07584	35.5	-	CGBY01	33	2126	1994	3/15/15	3/18/17	Scaffold	SC	SAMEA1031509	GCA_001348995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/995/GCA_001348995.1_6630_7_11	-	IT-NI-016
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.09236	41.1	-	CDTX01	59	2108	1991	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3233756	GCA_000947635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/635/GCA_000947635.1_Velvet_assembly	-	B10F
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.8132	50.4	-	FTYL01	438	5515	4616	1/28/17	2/26/17	Scaffold	SC	SAMEA3356041	GCA_900159165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/165/GCA_900159165.1_16703_8_23	-	3626STDY6095498
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.23722	28.9	-	FUPT01	50	4055	3857	2/14/17	2/23/17	Scaffold	SC	SAMEA3375132	GCA_900165235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/235/GCA_900165235.1_16780_8_66	-	VRECD0069
Klebsiella pneumoniae MRSN 3562	1409963	PRJNA223634	223634	Proteobacteria	Gammaproteobacteria	5.43751	57.3	-	LBIE01	38	5447	5204	4/29/15	2/21/17	Contig	J. Craig Venter Institute	SAMN03486519	GCA_000982215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/215/GCA_000982215.1_ASM98221v1	-	MRSN 3562
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.12217	64.1	-	FSHY01	40	5202	4992	12/14/16	3/21/17	Scaffold	SC	SAMEA2259587	GCA_900135845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/845/GCA_900135845.1_11861_8_5	-	782
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.14176	64.1	-	FVLP01	18	5168	5052	3/10/17	3/18/17	Scaffold	SC	SAMEA2259662	GCA_900135855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/855/GCA_900135855.1_11893_6_23	-	857
Klebsiella pneumoniae	573	PRJNA281446	281446	Proteobacteria	Gammaproteobacteria	5.66622	57.2	-	LBCM01	58	5612	5422	5/1/15	2/21/17	Contig	Nanjing Tech University	SAMN03488455	GCA_000986855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/986/855/GCA_000986855.1_ASM98685v1	26205860	CICC10011
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.11447	28.6	-	FUPV01	33	3812	3664	2/14/17	2/23/17	Scaffold	SC	SAMEA3375136	GCA_900165245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/245/GCA_900165245.1_16780_8_70	-	VRECD0089
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.90364	50.5	-	FTYM01	440	5630	4744	1/28/17	2/26/17	Scaffold	SC	SAMEA3356042	GCA_900159175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/175/GCA_900159175.1_16703_8_24	-	3626STDY6095499
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03614	41.2	-	CEAV01	56	2016	1914	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234108	GCA_000947675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/675/GCA_000947675.1_Velvet_assembly	-	V31I
Streptococcus agalactiae	1311	PRJEB2589	204298	Terrabacteria group	Firmicutes	2.05489	35.2	-	CGGK01	20	2108	1985	3/15/15	3/18/17	Scaffold	SC	SAMEA1031511	GCA_001349015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/015/GCA_001349015.1_6630_5_11	-	DK-NI-008
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.00088	39	-	JWYA03	235	3899	3769	12/29/14	3/18/17	Contig	JCVI	SAMN03084746	GCA_000809205.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/205/GCA_000809205.3_ASM80920v3	-	UH243_66
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.11651	65.7	-	LLMC01	120	6901	6633	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128511	GCA_001450525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/525/GCA_001450525.1_WH-SGI-V-07173	26604259	WH-SGI-V-07173
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.04259	39.6	-	CMOT01	75	2225	2009	3/22/15	3/11/17	Contig	SC	SAMEA2061712	GCA_001123305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/305/GCA_001123305.1_9803_7_41	-	19A
Escherichia coli HVH 107 (4-5860571)	1281043	PRJNA186128	186128	Proteobacteria	Gammaproteobacteria	5.36792	50.3	-	AVVV01	19	5506	5117	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885755	GCA_000457495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/495/GCA_000457495.1_Esch_coli_HVH_107_4-5860571_V1	-	HVH 107 (4-5860571)
Mycobacterium tuberculosis M2459	1448789	PRJNA235801	235801	Terrabacteria group	Actinobacteria	4.39091	65.6	-	JKJJ01	80	4322	4114	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599135	GCA_000664985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/664/985/GCA_000664985.1_Myco_tube_M2459_V1	-	M2459
Listeria monocytogenes	1639	PRJNA340018	340018	Terrabacteria group	Firmicutes	2.98868	37.8	-	MNCA01	83	3029	2898	11/4/16	3/2/17	Contig	North Carolina State University	SAMN05912867	GCA_001866355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/355/GCA_001866355.1_ASM186635v1	-	F8027
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70287	30.4	-	CURQ01	19	1818	1728	3/31/15	4/21/17	Scaffold	SC	SAMEA1010354	GCA_001224405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/405/GCA_001224405.1_7092_1_72	-	OXC6519
Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001679	1410925	PRJNA224217	224217	Proteobacteria	Gammaproteobacteria	4.67487	52.1	-	AYUX01	102	4773	4480	12/10/13	2/26/17	Contig	FDA	SAMN02383564	GCA_000505245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/245/GCA_000505245.1_CFSAN001679_01.0	-	CFSAN001679
Staphylococcus aureus GGMC6053	1409778	PRJNA224080	224080	Terrabacteria group	Firmicutes	2.93655	32.8	-	JBER01	27	3088	2915	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381837	GCA_000543245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/245/GCA_000543245.1_Stap_aure_GGMC6053_V1	-	GGMC6053
Staphylococcus aureus FVRH6118	1409780	PRJNA224082	224082	Terrabacteria group	Firmicutes	2.94604	32.8	-	JBEP01	11	3128	2963	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381839	GCA_000543265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/265/GCA_000543265.1_Stap_aure_FVRH6118_V1	-	FVRH6118
Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001680	1410926	PRJNA224218	224218	Proteobacteria	Gammaproteobacteria	4.68913	52.1	-	AYUW01	86	4793	4511	12/10/13	2/26/17	Contig	FDA	SAMN02383565	GCA_000505265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/265/GCA_000505265.1_CFSAN001680_01.0	-	CFSAN001680
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.78895	30.4	-	CUJC01	42	1903	1750	3/31/15	4/21/17	Scaffold	SC	SAMEA1010552	GCA_001225185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/185/GCA_001225185.1_7038_3_45	-	OXC6295
Listeria monocytogenes	1639	PRJNA340018	340018	Terrabacteria group	Firmicutes	2.96449	37.8	-	MNCC01	116	2984	2851	11/4/16	3/2/17	Contig	North Carolina State University	SAMN05715912	GCA_001866365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/365/GCA_001866365.1_ASM186636v1	-	J3422
Mycobacterium tuberculosis M2442	1448790	PRJNA235802	235802	Terrabacteria group	Actinobacteria	4.44213	65.6	-	JKJI01	92	4339	4112	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599136	GCA_000665005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/005/GCA_000665005.1_Myco_tube_M2442_V1	-	M2442
Escherichia coli HVH 109 (4-6977162)	1281045	PRJNA186130	186130	Proteobacteria	Gammaproteobacteria	5.58481	50.3	-	AVVX01	23	5760	5338	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885757	GCA_000457515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/515/GCA_000457515.1_Esch_coli_HVH_109_4-6977162_V1	-	HVH 109 (4-6977162)
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.0622	39.5	-	CLVK01	53	2252	2018	3/21/15	3/11/17	Contig	SC	SAMEA1026087	GCA_001123325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/325/GCA_001123325.1_6983_3_60	-	SMRU2268
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.73079	66.1	-	LLMF01	163	6402	6174	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128514	GCA_001450545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/545/GCA_001450545.1_WH-SGI-V-07176	26604259	WH-SGI-V-07176
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.03751	39	-	JWYB03	163	3936	3796	12/29/14	3/18/17	Contig	JCVI	SAMN03084745	GCA_000809215.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/215/GCA_000809215.3_ASM80921v3	-	UH487_64
Streptococcus agalactiae	1311	PRJDB4317	309965	Terrabacteria group	Firmicutes	2.10659	35.5	-	BCNI01	58	2154	2052	1/26/16	3/19/17	Scaffold	"Laboratory of Genome Science, Graduate School of Marine Science and Technology, Tokyo University of Marine Science and Technology"	SAMD00042788	GCA_001592615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/615/GCA_001592615.1_ASM159261v1	27013037	KKN 3/1 (L)
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.07658	41.1	-	CDXV01	96	2061	1957	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234057	GCA_000947735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/735/GCA_000947735.1_Velvet_assembly	-	S4I
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.80209	50.6	-	FTYN01	434	5463	4552	1/28/17	2/26/17	Scaffold	SC	SAMEA3356043	GCA_900159185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/185/GCA_900159185.1_16703_8_25	-	3626STDY6095500
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.08181	28.5	-	FUPW01	28	3790	3642	2/14/17	2/23/17	Scaffold	SC	SAMEA3375137	GCA_900165255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/255/GCA_900165255.1_16780_8_71	-	VRECD0090
Klebsiella pneumoniae	573	PRJNA265012	265012	Proteobacteria	Gammaproteobacteria	5.4842	57.3	-	JSWX01	90	5450	5206	5/14/15	2/21/17	Contig	University of Malaya	SAMN03145043	GCA_001006575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/575/GCA_001006575.1_ASM100657v1	-	B1
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.20269	64.1	-	FVLN01	24	5307	5069	3/10/17	3/18/17	Scaffold	SC	SAMEA2259589	GCA_900135875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/875/GCA_900135875.1_11861_8_7	-	784
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15271	64.1	-	FVLS01	4	5249	5076	3/10/17	3/18/17	Scaffold	SC	SAMEA2275634	GCA_900135905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/905/GCA_900135905.1_12078_1_69	-	1172
Klebsiella pneumoniae	573	PRJNA265017	265017	Proteobacteria	Gammaproteobacteria	5.48089	57.3	-	JSXA01	95	5460	5219	5/14/15	2/21/17	Contig	University of Malaya	SAMN03145048	GCA_001006625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/625/GCA_001006625.1_ASM100662v1	-	CH4
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.17491	28.3	-	FUPX01	28	3920	3737	2/14/17	2/23/17	Scaffold	SC	SAMEA3375138	GCA_900165265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/265/GCA_900165265.1_16780_8_72	-	VRECD0095
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.91969	50.4	-	FTYO01	443	5630	4720	1/28/17	2/26/17	Scaffold	SC	SAMEA3356044	GCA_900159195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/195/GCA_900159195.1_16703_8_26	-	3626STDY6095501
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03677	41.2	-	CDXH01	56	2021	1930	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234037	GCA_000947755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/755/GCA_000947755.1_Velvet_assembly	-	S1O
Streptococcus agalactiae	1311	PRJDB4317	309965	Terrabacteria group	Firmicutes	2.04158	35.2	-	BCNJ01	34	2099	2017	1/26/16	3/19/17	Scaffold	"Laboratory of Genome Science, Graduate School of Marine Science and Technology, Tokyo University of Marine Science and Technology"	SAMD00042787	GCA_001592635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/635/GCA_001592635.1_ASM159263v1	27013037	UBN 6/2 (K)
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.03986	38.9	-	JWYC03	164	3925	3797	12/29/14	3/18/17	Contig	JCVI	SAMN03084744	GCA_000809225.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/225/GCA_000809225.3_ASM80922v3	-	UH487_63
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.67464	66.3	-	LLMI01	66	6347	6164	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128517	GCA_001450555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/555/GCA_001450555.1_WH-SGI-V-07179	26604259	WH-SGI-V-07179
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.13212	39.7	-	CMVW01	100	2280	2022	3/22/15	3/11/17	Contig	SC	SAMEA1022892	GCA_001123385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/385/GCA_001123385.1_5756_6_11	-	307
Escherichia coli HVH 110 (4-6978754)	1281046	PRJNA186131	186131	Proteobacteria	Gammaproteobacteria	5.75478	50.6	-	AVVY01	15	6021	5688	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885758	GCA_000457535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/535/GCA_000457535.1_Esch_coli_HVH_110_4-6978754_V1	-	HVH 110 (4-6978754)
Mycobacterium tuberculosis M2440	1448791	PRJNA235803	235803	Terrabacteria group	Actinobacteria	4.41676	65.6	-	JKJH01	79	4321	4108	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599137	GCA_000665025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/025/GCA_000665025.1_Myco_tube_M2440_V1	-	M2440
Listeria monocytogenes	1639	PRJNA340018	340018	Terrabacteria group	Firmicutes	2.96398	37.8	-	MNCB01	96	3006	2871	11/4/16	3/2/17	Contig	North Carolina State University	SAMN05912869	GCA_001866385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/385/GCA_001866385.1_ASM186638v1	-	FDA-100
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.91448	30.5	-	CUMW01	66	2090	1856	3/31/15	4/21/17	Scaffold	SC	SAMEA1010598	GCA_001225425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/425/GCA_001225425.1_7065_7_45	-	OXC6391
Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001681	1410927	PRJNA224219	224219	Proteobacteria	Gammaproteobacteria	4.68559	52.1	-	AYUV01	82	4773	4508	12/10/13	2/26/17	Contig	FDA	SAMN02383566	GCA_000505285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/285/GCA_000505285.1_CFSAN001681_01.0	-	CFSAN001681
Staphylococcus aureus OCMM6129	1409781	PRJNA224083	224083	Terrabacteria group	Firmicutes	2.929	32.7	-	JBEO01	12	3090	2927	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381840	GCA_000543285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/285/GCA_000543285.1_Stap_aure_OCMM6129_V1	-	OCMM6129
Staphylococcus aureus CHAP6022	1409782	PRJNA224084	224084	Terrabacteria group	Firmicutes	2.89744	32.7	-	JBEN01	7	3051	2888	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381841	GCA_000543305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/305/GCA_000543305.1_Stap_aure_CHAP6022_V1	-	CHAP6022
Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001690	1410928	PRJNA224220	224220	Proteobacteria	Gammaproteobacteria	4.71297	52.1	-	AYUU01	65	4824	4556	12/10/13	2/26/17	Contig	FDA	SAMN02383567	GCA_000505305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/305/GCA_000505305.1_CFSAN001690_01.0	-	CFSAN001690
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70003	30.4	-	CUSA01	20	1802	1668	3/31/15	3/18/17	Scaffold	SC	SAMEA1010256	GCA_001226085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/085/GCA_001226085.1_7092_1_82	-	OXC6529
Listeria monocytogenes	1639	PRJNA340018	340018	Terrabacteria group	Firmicutes	2.96891	37.8	-	MNCD01	98	3033	2901	11/4/16	3/2/17	Contig	North Carolina State University	SAMN05715913	GCA_001866435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/435/GCA_001866435.1_ASM186643v1	-	J4600
Mycobacterium tuberculosis M2435	1448792	PRJNA235804	235804	Terrabacteria group	Actinobacteria	4.42531	65.6	-	JKJG01	72	4326	4109	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599138	GCA_000665045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/045/GCA_000665045.1_Myco_tube_M2435_V1	-	M2435
Escherichia coli HVH 111 (4-7039018)	1281047	PRJNA186132	186132	Proteobacteria	Gammaproteobacteria	4.95255	50.5	-	AVVZ01	6	5004	4710	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885759	GCA_000457555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/555/GCA_000457555.1_Esch_coli_HVH_111_4-7039018_V1	-	HVH 111 (4-7039018)
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.14241	39.7	-	CMVO01	85	2309	2020	3/23/15	3/6/17	Contig	SC	SAMEA1022801	GCA_001123525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/525/GCA_001123525.1_5756_6_3	-	279
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.72037	66.1	-	LLMM01	122	6498	6307	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128521	GCA_001450585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/585/GCA_001450585.1_WH-SGI-V-07182	26604259	WH-SGI-V-07182
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.03357	39	-	JWYQ03	183	3947	3779	12/29/14	3/18/17	Contig	JCVI	SAMN03084730	GCA_000809235.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/235/GCA_000809235.3_ASM80923v3	-	UH348_27
Streptococcus agalactiae	1311	PRJNA291826	291826	Terrabacteria group	Firmicutes	2.02469	35.4	-	LHQU01	80	2035	1946	6/22/16	3/20/17	Scaffold	Huazhong Agricultural University	SAMN03955805	GCA_001675305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/305/GCA_001675305.1_ASM167530v1	-	HZAUSC001
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.03685	41.2	-	CEBO01	52	2018	1925	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234055	GCA_000947795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/795/GCA_000947795.1_Velvet_assembly	-	S3Z
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.79138	50.6	-	FTYP01	429	5467	4542	1/28/17	2/26/17	Scaffold	SC	SAMEA3356045	GCA_900159205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/205/GCA_900159205.1_16703_8_27	-	3626STDY6095502
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.57118	28.5	-	FUPY01	97	4413	4200	2/14/17	2/23/17	Scaffold	SC	SAMEA3375139	GCA_900165275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/275/GCA_900165275.1_16780_8_73	-	VRECD0116
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA278984	278984	Proteobacteria	Gammaproteobacteria	5.82184	57	-	LAKK01	12	5957	5685	5/18/15	2/21/17	Contig	New Jersey Medical School-Rutgers University	SAMN03435903	GCA_001008725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/725/GCA_001008725.1_ASM100872v1	26089425	ST258_FL
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16296	64.1	-	FVLV01	5	5259	5092	3/10/17	6/10/17	Scaffold	SC	SAMEA2275636	GCA_900135915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/915/GCA_900135915.1_12078_1_71	-	1174
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.00331	64.3	-	FSIA01	29	5002	4853	12/14/16	3/21/17	Scaffold	SC	SAMEA2275729	GCA_900135925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/925/GCA_900135925.1_12082_5_62	-	1003
Klebsiella pneumoniae	573	PRJNA285085	285085	Proteobacteria	Gammaproteobacteria	5.2443	57.4	-	LDZO01	64	5241	4994	6/23/15	2/21/17	Contig	UCSF	SAMN03737944	GCA_001038365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/365/GCA_001038365.1_ASM103836v1	-	JS86C16
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.19055	28.6	-	FUPZ01	41	3932	3783	2/14/17	2/23/17	Scaffold	SC	SAMEA3375140	GCA_900165285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/285/GCA_900165285.1_16780_8_74	-	VRECD0117
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.96654	50.5	-	FTYQ01	463	5730	4806	1/28/17	2/26/17	Scaffold	SC	SAMEA3443697	GCA_900159215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/215/GCA_900159215.1_16703_8_28	-	3626STDY6095503
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.04814	41.2	-	CDXN01	57	2041	1948	2/14/15	3/17/17	Scaffold	UNIVERSITY OF CAMBRIDGE	SAMEA3234052	GCA_000947835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/835/GCA_000947835.1_Velvet_assembly	-	S3E
Streptococcus agalactiae	1311	PRJNA274685	274685	Terrabacteria group	Firmicutes	2.02413	35.2	-	JYCT01	34	2078	1973	6/7/17	6/9/17	Scaffold	CUHK	SAMN03331941	GCA_002176575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/575/GCA_002176575.1_ASM217657v1	-	CU_GBS_00
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.90463	38.9	-	JWVZ03	110	3786	3651	12/29/14	3/18/17	Contig	JCVI	SAMN03084803	GCA_000809285.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/285/GCA_000809285.3_ASM80928v3	-	UH184_310
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.19577	65.8	-	LLMP01	121	6711	6505	11/30/15	3/10/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128524	GCA_001450625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/625/GCA_001450625.1_WH-SGI-V-07185	-	WH-SGI-V-07185
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.20864	39.6	-	CMSS01	88	2402	2120	3/23/15	3/4/17	Contig	SC	SAMEA2061961	GCA_001123565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/565/GCA_001123565.1_9803_8_73	-	type strain: N
Escherichia coli HVH 112 (4-5987253)	1281048	PRJNA186133	186133	Proteobacteria	Gammaproteobacteria	5.07966	50.5	-	AVWA01	17	5166	4863	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885760	GCA_000457575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/575/GCA_000457575.1_Esch_coli_HVH_112_4-5987253_V1	-	HVH 112 (4-5987253)
Mycobacterium tuberculosis M2416	1448794	PRJNA235806	235806	Terrabacteria group	Actinobacteria	4.42379	65.6	-	JKJF01	77	4326	4102	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599140	GCA_000665065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/065/GCA_000665065.1_Myco_tube_M2416_V1	26941159	M2416
Listeria monocytogenes	1639	PRJNA340018	340018	Terrabacteria group	Firmicutes	3.1066	37.8	-	MNCE01	115	3167	3035	11/4/16	3/2/17	Contig	North Carolina State University	SAMN05715905	GCA_001866445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/445/GCA_001866445.1_ASM186644v1	-	2008-911
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.76524	30.4	-	CUTO01	37	1888	1755	3/31/15	3/18/17	Scaffold	SC	SAMEA1401672	GCA_001226945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/945/GCA_001226945.1_7213_3_31	-	OXC6574
Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001692	1410930	PRJNA224222	224222	Proteobacteria	Gammaproteobacteria	4.70594	52.1	-	AYUS01	76	4811	4528	12/10/13	2/26/17	Contig	FDA	SAMN02383569	GCA_000505325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/325/GCA_000505325.1_CFSAN001692_01.0	-	CFSAN001692
Staphylococcus aureus KINW6047	1409784	PRJNA224086	224086	Terrabacteria group	Firmicutes	2.89179	32.8	-	JBEL01	20	3022	2853	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381843	GCA_000543325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/325/GCA_000543325.1_Stap_aure_KINW6047_V1	-	KINW6047
Staphylococcus aureus KINW6048	1409785	PRJNA224087	224087	Terrabacteria group	Firmicutes	3.02954	32.7	-	JBEK01	39	3188	3019	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02381844	GCA_000543345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/345/GCA_000543345.1_Stap_aure_KINW6048_V1	-	KINW6048
Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001697	1410931	PRJNA224223	224223	Proteobacteria	Gammaproteobacteria	4.71137	52.1	-	AYUR01	81	4821	4543	12/10/13	2/26/17	Contig	FDA	SAMN02383570	GCA_000505345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/345/GCA_000505345.1_CFSAN001697_01.0	-	CFSAN001697
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.74211	30.3	-	CTRS01	17	1845	1714	3/31/15	3/18/17	Scaffold	SC	SAMEA1401767	GCA_001227425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/425/GCA_001227425.1_7213_3_43	-	OXC6586
Listeria monocytogenes	1639	PRJNA340018	340018	Terrabacteria group	Firmicutes	3.17134	37.7	-	MNCF01	252	3244	3099	11/4/16	3/2/17	Contig	North Carolina State University	SAMN05715911	GCA_001866455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/455/GCA_001866455.1_ASM186645v1	-	2012-0070
Mycobacterium tuberculosis M2402	1448795	PRJNA235807	235807	Terrabacteria group	Actinobacteria	4.42346	65.6	-	JKJE01	76	4349	4112	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599141	GCA_000665085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/085/GCA_000665085.1_Myco_tube_M2402_V1	-	M2402
Escherichia coli HVH 113 (4-7535473)	1281049	PRJNA186134	186134	Proteobacteria	Gammaproteobacteria	5.46361	50.7	-	AVWB01	15	5674	5330	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885761	GCA_000457595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/595/GCA_000457595.1_Esch_coli_HVH_113_4-7535473_V1	-	HVH 113 (4-7535473)
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.22299	39.5	-	CPQJ01	58	2477	2220	3/23/15	3/4/17	Contig	SC	SAMEA1408238	GCA_001123705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/705/GCA_001123705.1_7444_8_58	-	0202+01134
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.80001	66	-	LLMV01	86	6525	6312	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128530	GCA_001450665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/665/GCA_001450665.1_WH-SGI-V-07224	26604259	WH-SGI-V-07224
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.03816	39	-	JWYE03	148	3933	3802	12/29/14	3/18/17	Contig	JCVI	SAMN03084742	GCA_000809305.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/305/GCA_000809305.3_ASM80930v3	-	UH455_61
Candidatus Profftella armatura	669502	PRJNA39873	39873	Proteobacteria	Betaproteobacteria	0.464857	24.1965	chromosome:NC_021885.1/CP003468.1; plasmid unnamed:NC_021886.1/CP003469.1	-	2	422	358	7/26/13	4/8/17	Complete Genome	RIKEN	SAMN02603760	GCA_000441555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/555/GCA_000441555.1_ASM44155v1	23850282	DC
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.8759	50.6	-	FTYR01	445	5601	4666	1/28/17	2/26/17	Scaffold	SC	SAMEA3356046	GCA_900159225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/225/GCA_900159225.1_16703_8_29	-	3626STDY6095504
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.39614	28.5	-	FUQD01	56	4200	4026	2/14/17	2/23/17	Scaffold	SC	SAMEA3375144	GCA_900165295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/295/GCA_900165295.1_16780_8_78	-	VRECD0158
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.71421	56.8	-	JWFI01	827	5952	5373	7/10/15	2/21/17	Contig	University of Washington	SAMN03197000	GCA_001061755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/755/GCA_001061755.1_ASM106175v1	26230489	1035_KPNE
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.51531	64	-	FSHZ01	33	5675	5454	12/14/16	3/21/17	Scaffold	SC	SAMEA2259683	GCA_900135935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/935/GCA_900135935.1_11893_6_39	-	878
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18279	64	-	FVMA01	23	5190	5063	3/10/17	3/18/17	Scaffold	SC	SAMEA2275716	GCA_900135945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/945/GCA_900135945.1_12082_5_61	-	990
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.35768	57.3	-	JUYR01	797	5574	5035	7/10/15	2/21/17	Contig	University of Washington	SAMN03197849	GCA_001065795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/795/GCA_001065795.1_ASM106579v1	26230489	648_KPNE
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.22548	28.7	-	FUQA01	55	3962	3780	2/14/17	2/23/17	Scaffold	SC	SAMEA3375143	GCA_900165305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/305/GCA_900165305.1_16780_8_77	-	VRECD0153
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.96491	50.4	-	FTYS01	438	5890	4780	1/28/17	2/26/17	Scaffold	SC	SAMEA3356047	GCA_900159235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/235/GCA_900159235.1_16703_8_30	-	3626STDY6095505
Buchnera aphidicola str. Ua (Uroleucon ambrosiae)	1005057	PRJNA65479	65479	Proteobacteria	Gammaproteobacteria	0.627953	24.1448	chromosome:NC_017259.1/CP002648.1; plasmid pLeu:NC_017261.1/CP002649.1; plasmid pTrp:NC_017260.1/CP002650.1	-	3	593	540	9/7/11	3/14/17	Complete Genome	Yale University	SAMN02604330	GCA_000225465.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/465/GCA_000225465.1_ASM22546v1	21912528	Ua
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.10111	41.1	-	CZEK01	71	2093	1944	6/30/16	3/20/17	Scaffold	ACADEMIC MEDICAL CENTER	SAMEA3595195	GCA_900007825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/825/GCA_900007825.1_assembly_2012092	-	-
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.17461	39	-	JWWC03	151	4087	3948	12/29/14	3/18/17	Contig	JCVI	SAMN03084800	GCA_000809325.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/325/GCA_000809325.3_ASM80932v3	-	UH507_300
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	5.84125	66.5	-	LLNE01	39	5585	5434	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128539	GCA_001450715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/715/GCA_001450715.1_WH-SGI-V-07233	26604259	WH-SGI-V-07233
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.03963	39.7	-	CKZF01	63	2247	2042	3/21/15	3/4/17	Contig	SC	SAMEA1026106	GCA_001123745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/745/GCA_001123745.1_6840_1_3	-	SMRU1755
Escherichia coli HVH 114 (4-7037740)	1281050	PRJNA186135	186135	Proteobacteria	Gammaproteobacteria	5.2752	50.5	-	AVWC01	12	5386	5023	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885762	GCA_000457615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/615/GCA_000457615.1_Esch_coli_HVH_114_4-7037740_V1	-	HVH 114 (4-7037740)
Mycobacterium tuberculosis M2376	1448796	PRJNA235808	235808	Terrabacteria group	Actinobacteria	4.41521	65.6	-	JKJD01	77	4328	4102	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599142	GCA_000665105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/105/GCA_000665105.1_Myco_tube_M2376_V1	-	M2376
Listeria monocytogenes	1639	PRJNA340018	340018	Terrabacteria group	Firmicutes	3.01127	37.9	-	MLFL01	97	3074	2962	11/4/16	3/2/17	Contig	North Carolina State University	SAMN05912870	GCA_001866565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/866/565/GCA_001866565.1_ASM186656v1	-	J2213
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70418	30.4	-	CURN01	26	1813	1704	3/31/15	3/18/17	Scaffold	SC	SAMEA1010488	GCA_001227805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/805/GCA_001227805.1_7092_1_7	-	OXC6454
Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001589	1410919	PRJNA224210	224210	Proteobacteria	Gammaproteobacteria	4.70109	52.1	-	AYVE01	65	4816	4534	12/10/13	2/26/17	Contig	FDA	SAMN02383558	GCA_000505385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/385/GCA_000505385.1_CFSAN001589_01.0	-	CFSAN001589
Staphylococcus aureus M0744	1388563	PRJNA216736	216736	Terrabacteria group	Firmicutes	2.88728	32.8	-	JCOD01	64	3067	2886	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325687	GCA_000543385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/385/GCA_000543385.1_Stap_aure_M0744_V1	-	M0744
Staphylococcus aureus M0746	1388564	PRJNA216737	216737	Terrabacteria group	Firmicutes	2.87245	32.8	-	JCOE01	51	3027	2840	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325688	GCA_000543405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/405/GCA_000543405.1_Stap_aure_M0746_V1	-	M0746
Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001670	1410922	PRJNA224214	224214	Proteobacteria	Gammaproteobacteria	4.69198	52.1	-	AYVB01	75	4808	4531	12/10/13	2/26/17	Contig	FDA	SAMN02383561	GCA_000505405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/405/GCA_000505405.1_CFSAN001670_01.0	-	CFSAN001670
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.67004	30.4	-	CUNV01	17	1758	1649	3/31/15	3/18/17	Scaffold	SC	SAMEA1010364	GCA_001228125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/125/GCA_001228125.1_7065_7_7	-	OXC6353
Listeria monocytogenes	1639	PRJNA340018	340018	Terrabacteria group	Firmicutes	2.98711	37.8	-	MPBE01	117	3015	2899	11/17/16	3/2/17	Contig	North Carolina State University	SAMN05912868	GCA_001880165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/165/GCA_001880165.1_ASM188016v1	-	BS-26
Mycobacterium tuberculosis M2361	1448797	PRJNA235809	235809	Terrabacteria group	Actinobacteria	4.39372	65.6	-	JKJC01	83	4326	4105	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599143	GCA_000665125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/125/GCA_000665125.1_Myco_tube_M2361_V1	-	M2361
Escherichia coli HVH 115 (4-4465997)	1281051	PRJNA186136	186136	Proteobacteria	Gammaproteobacteria	5.22222	50.5	-	AVWD01	18	5390	5017	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885763	GCA_000457635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/635/GCA_000457635.1_Esch_coli_HVH_115_4-4465997_V1	-	HVH 115 (4-4465997)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.13216	39.6	-	CNSW02	164	2319	2106	3/22/15	3/11/17	Contig	SC	SAMEA1032522	GCA_001123865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/865/GCA_001123865.2_6999_3_4	-	1996
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.29424	66.5	-	LLNH01	54	5995	5840	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128542	GCA_001450745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/745/GCA_001450745.1_WH-SGI-V-07236	26604259	WH-SGI-V-07236
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.86257	38.9	-	JWYD03	105	3723	3603	12/29/14	3/18/17	Contig	JCVI	SAMN03084743	GCA_000809345.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/345/GCA_000809345.3_ASM80934v3	-	UH455_62
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.05713	41.1	-	CZER01	42	2066	1962	6/30/16	3/20/17	Scaffold	ACADEMIC MEDICAL CENTER	SAMEA3595208	GCA_900007845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/845/GCA_900007845.1_assembly_C187	-	-
Candidatus Sulcia muelleri	336810	PRJNA267513	267513	FCB group	Bacteroidetes/Chlorobi group	0.190405	24.1	chromosome:CP010105.1	-	1	221	187	12/9/14	2/26/15	Complete Genome	Academia Sinica	SAMN03196606	GCA_000800435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/435/GCA_000800435.1_ASM80043v1	-	ML
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.91411	50.5	-	FTYU01	435	5629	4729	1/28/17	3/2/17	Scaffold	SC	SAMEA3356048	GCA_900159245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/245/GCA_900159245.1_16703_8_31	-	3626STDY6095506
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.32084	28.9	-	FUQE01	27	4115	3904	2/14/17	2/23/17	Scaffold	SC	SAMEA3375141	GCA_900165315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/315/GCA_900165315.1_16780_8_75	-	VRECD0118
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.2413	57.3	-	JUVI01	168	5156	4993	7/10/15	2/21/17	Contig	University of Washington	SAMN03197936	GCA_001066095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/095/GCA_001066095.1_ASM106609v1	26230489	731_KPNE
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.90201	64.2	-	FVLX01	6	4917	4788	3/10/17	3/18/17	Scaffold	SC	SAMEA2275730	GCA_900135955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/955/GCA_900135955.1_12082_5_63	-	1004
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.90045	64.2	-	FVLW01	6	4919	4788	3/10/17	3/18/17	Scaffold	SC	SAMEA2275732	GCA_900135965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/965/GCA_900135965.1_12082_5_64	-	1006
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.41155	57.3	-	JUVG01	300	5480	5286	7/10/15	2/21/17	Contig	University of Washington	SAMN03197938	GCA_001066115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/115/GCA_001066115.1_ASM106611v1	26230489	733_KPNE
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.29042	28.5	-	FUQC01	43	4048	3871	2/14/17	2/23/17	Scaffold	SC	SAMEA3375147	GCA_900165325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/325/GCA_900165325.1_16780_8_81	-	VRECD0180
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.8458	50.4	-	FTYV01	431	5544	4648	1/28/17	2/26/17	Scaffold	SC	SAMEA3356049	GCA_900159255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/255/GCA_900159255.1_16703_8_32	-	3626STDY6095507
Buchnera aphidicola (Cinara confinis)	1878935	PRJEB15504	354740	Proteobacteria	Gammaproteobacteria	0.451961	24.0527	chromosome 1:NZ_LT667503.1/LT667503.1; plasmid pLeuTrp:NZ_LT667504.1/LT667504.1	-	2	423	379	11/26/16	4/10/17	Complete Genome	Centre de Biologie pour la Gestion des Populations (CBGP - UMR1062)	SAMEA4556315	GCA_900128735.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/735/GCA_900128735.1_BCiconfinis_v1.0	-	BCiconfinis
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.17719	41.3	-	CZFI01	40	2200	2044	6/30/16	3/20/17	Scaffold	ACADEMIC MEDICAL CENTER	SAMEA3595223	GCA_900007935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/935/GCA_900007935.1_assembly_GD-0027	-	-
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.18462	39	-	JWVN03	133	4107	3964	12/29/14	3/18/17	Contig	JCVI	SAMN03084816	GCA_000809365.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/365/GCA_000809365.3_ASM80936v3	-	UH532_386
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.79178	66	-	LLNK01	93	6447	6236	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128545	GCA_001450755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/755/GCA_001450755.1_WH-SGI-V-07239	26604259	WH-SGI-V-07239
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09224	39.6	-	CKRU01	41	2322	2093	3/21/15	3/4/17	Contig	SC	SAMEA1023899	GCA_001123885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/885/GCA_001123885.1_6680_8_23	-	SMRU215
Escherichia coli HVH 115 (4-4465989)	1281052	PRJNA186137	186137	Proteobacteria	Gammaproteobacteria	5.24715	50.5	-	AVWE01	11	5416	5032	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885764	GCA_000457655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/655/GCA_000457655.1_Esch_coli_HVH_115_4-4465989_V1	-	HVH 115 (4-4465989)
Mycobacterium tuberculosis M2360	1448798	PRJNA235810	235810	Terrabacteria group	Actinobacteria	4.39306	65.6	-	JKJB01	82	4332	4109	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599144	GCA_000665145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/145/GCA_000665145.1_Myco_tube_M2360_V1	-	M2360
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.92109	37.9	-	MRYJ01	65	2956	2843	12/21/16	3/2/17	Contig	FDA/CFSAN	SAMN04450328	GCA_001911415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/415/GCA_001911415.1_ASM191141v1	-	FDA00009837
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.83197	30.2	-	CUKD01	52	1972	1796	3/31/15	3/18/17	Scaffold	SC	SAMEA1010504	GCA_001228305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/305/GCA_001228305.1_7038_3_7	-	OXC6256
Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001674	1410917	PRJNA224207	224207	Proteobacteria	Gammaproteobacteria	4.69452	52.1	-	AYUY01	90	4809	4519	12/10/13	2/26/17	Contig	FDA	SAMN02383556	GCA_000505425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/425/GCA_000505425.1_CFSAN001674_01.0	-	CFSAN001674
Staphylococcus aureus M0750	1388565	PRJNA216738	216738	Terrabacteria group	Firmicutes	2.8136	32.8	-	JCOF01	43	2921	2728	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325689	GCA_000543425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/425/GCA_000543425.1_Stap_aure_M0750_V1	-	M0750
Staphylococcus aureus M0752	1388566	PRJNA216739	216739	Terrabacteria group	Firmicutes	2.88949	32.8	-	JCOG01	61	3066	2891	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325690	GCA_000543445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/445/GCA_000543445.1_Stap_aure_M0752_V1	-	M0752
Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001691	1410929	PRJNA224221	224221	Proteobacteria	Gammaproteobacteria	4.71253	52.1	-	AYUT01	68	4826	4548	12/10/13	2/26/17	Contig	FDA	SAMN02383568	GCA_000505445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/445/GCA_000505445.1_CFSAN001691_01.0	-	CFSAN001691
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69332	30.4	-	CUKI01	18	1815	1711	3/31/15	3/18/17	Scaffold	SC	SAMEA1010247	GCA_001228485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/485/GCA_001228485.1_7038_3_75	-	OXC6325
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.95248	37.9	-	LYXY01	16	3027	2931	12/27/16	3/2/17	Contig	FDA/CFSAN	SAMN03287233	GCA_001922515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/515/GCA_001922515.1_ASM192251v1	-	FDA00008730
Mycobacterium tuberculosis M2145	1448799	PRJNA235811	235811	Terrabacteria group	Actinobacteria	4.42785	65.6	-	JKJA01	71	4327	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599145	GCA_000665165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/165/GCA_000665165.1_Myco_tube_M2145_V1	-	M2145
Escherichia coli HVH 116 (4-6879942)	1281053	PRJNA186138	186138	Proteobacteria	Gammaproteobacteria	5.24195	50.5	-	AVWF01	13	5410	5032	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885765	GCA_000457675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/675/GCA_000457675.1_Esch_coli_HVH_116_4-6879942_V1	-	HVH 116 (4-6879942)
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07444	39.6	-	CKRA01	58	2260	2009	3/21/15	3/4/17	Contig	SC	SAMEA1025095	GCA_001123905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/905/GCA_001123905.1_6680_7_12	-	SMRU972
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.00294	66	-	LLNN01	103	6697	6467	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128548	GCA_001450785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/785/GCA_001450785.1_WH-SGI-V-07242	26604259	WH-SGI-V-07242
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.04829	38.9	-	JWYM03	117	3944	3816	12/29/14	3/18/17	Contig	JCVI	SAMN03084734	GCA_000809385.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/385/GCA_000809385.3_ASM80938v3	-	UH487_41
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.09792	41.1	-	CZGP01	80	2083	1942	6/30/16	3/20/17	Scaffold	ACADEMIC MEDICAL CENTER	SAMEA3595253	GCA_900008005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/005/GCA_900008005.1_assembly_GD-0096	-	-
Mycoplasma mycoides subsp. mycoides	2103	PRJNA280353	280353	Terrabacteria group	Tenericutes	1.16105	24	chromosome:NZ_CP011261.1/CP011261.1	-	1	1119	979	2/9/16	4/4/17	Complete Genome	Chinese National Human Genome Center at Shanghai	SAMN04479833	GCA_001554075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/075/GCA_001554075.1_ASM155407v1	26750304	Ben50
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.90777	50.4	-	FTYT01	438	5622	4732	1/28/17	2/26/17	Scaffold	SC	SAMEA3356050	GCA_900159265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/265/GCA_900159265.1_16703_8_33	-	3626STDY6095508
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.28148	28.4	-	FUQB01	40	4035	3856	2/14/17	2/23/17	Scaffold	SC	SAMEA3375148	GCA_900165335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/335/GCA_900165335.1_16780_8_82	-	VRECD0181
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.41884	57.2	-	JUUX01	290	5400	5172	7/10/15	2/21/17	Contig	University of Washington	SAMN03197947	GCA_001066155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/155/GCA_001066155.1_ASM106615v1	26230489	741_KPNE
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.47689	64.1	-	FVLZ01	81	5604	5360	3/10/17	3/18/17	Scaffold	SC	SAMEA2275706	GCA_900135975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/975/GCA_900135975.1_12163_1_55	-	980
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.72067	64.3	-	FVLY01	7	4676	4546	3/10/17	3/18/17	Scaffold	SC	SAMEA2275839	GCA_900135985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/985/GCA_900135985.1_12082_5_79	-	1113
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.41928	57.2	-	JUUV01	312	5427	5177	7/10/15	2/21/17	Contig	University of Washington	SAMN03197949	GCA_001066165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/165/GCA_001066165.1_ASM106616v1	26230489	743_KPNE
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.29403	28.3	-	FUQG01	37	4006	3829	2/14/17	2/23/17	Scaffold	SC	SAMEA3375149	GCA_900165345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/345/GCA_900165345.1_16780_8_83	-	VRECD0182
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.9221	50.5	-	FTYW01	443	5659	4749	1/28/17	2/26/17	Scaffold	SC	SAMEA3356051	GCA_900159275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/275/GCA_900159275.1_16703_8_34	-	3626STDY6095509
Mycoplasma mycoides subsp. mycoides	2103	PRJNA280354	280354	Terrabacteria group	Tenericutes	1.14962	24	chromosome:CP011262.1	-	1	1088	1051	2/9/16	2/9/16	Complete Genome	Chinese National Human Genome Center at Shanghai	SAMN04479834	GCA_001554095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/095/GCA_001554095.1_ASM155409v1	-	Ben181
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.28385	41.2	-	CZGO01	73	2336	2149	6/30/16	3/20/17	Scaffold	ACADEMIC MEDICAL CENTER	SAMEA3595258	GCA_900008035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/035/GCA_900008035.1_assembly_GD-0106	-	-
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.03983	39	-	JWYT03	188	3951	3784	12/29/14	3/18/17	Contig	JCVI	SAMN03084727	GCA_000809405.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/405/GCA_000809405.3_ASM80940v3	-	UH348_13
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.96221	66	-	LLNR01	156	6794	6558	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128552	GCA_001450795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/795/GCA_001450795.1_WH-SGI-V-07246	26604259	WH-SGI-V-07246
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00917	39.6	-	CNWJ02	115	2173	1985	3/23/15	3/5/17	Contig	SC	SAMEA1032426	GCA_001124005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/005/GCA_001124005.2_7001_1_4	-	R34-3081
Escherichia coli HVH 117 (4-6857191)	1281054	PRJNA186139	186139	Proteobacteria	Gammaproteobacteria	5.28102	50.4	-	AVWG01	20	5457	5076	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885766	GCA_000457695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/695/GCA_000457695.1_Esch_coli_HVH_117_4-6857191_V1	-	HVH 117 (4-6857191)
Mycobacterium tuberculosis M2144	1448800	PRJNA235812	235812	Terrabacteria group	Actinobacteria	4.42049	65.6	-	JKIZ01	70	4318	4093	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599146	GCA_000665185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/185/GCA_000665185.1_Myco_tube_M2144_V1	-	M2144
Listeria monocytogenes	1639	PRJNA348175	348175	Terrabacteria group	Firmicutes	2.9897	37.8	-	MLQW01	27	3059	2957	1/6/17	3/2/17	Contig	LAU	SAMN05905558	GCA_001937955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/955/GCA_001937955.1_ASM193795v1	-	LIST-LEB
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.7072	30.4	-	CUNY01	18	1810	1718	3/31/15	3/18/17	Scaffold	SC	SAMEA1010597	GCA_001228605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/605/GCA_001228605.1_7065_7_72	-	OXC6420
Salmonella enterica subsp. enterica serovar Give var. 15 str. CFSAN004343	1410932	PRJNA224224	224224	Proteobacteria	Gammaproteobacteria	4.97224	52.1	-	AYUQ01	143	5181	4867	12/10/13	2/26/17	Contig	FDA	SAMN02383571	GCA_000505465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/465/GCA_000505465.1_CFSAN004343_01.0	-	CFSAN004343
Staphylococcus aureus M0772	1388567	PRJNA216740	216740	Terrabacteria group	Firmicutes	2.88635	32.8	-	JCOH01	38	3033	2861	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325691	GCA_000543465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/465/GCA_000543465.1_Stap_aure_M0772_V1	-	M0772
Staphylococcus aureus M0773	1388568	PRJNA216741	216741	Terrabacteria group	Firmicutes	2.88789	32.7	-	JCOI01	67	3070	2899	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325692	GCA_000543485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/485/GCA_000543485.1_Stap_aure_M0773_V1	-	M0773
Salmonella enterica subsp. enterica serovar Muenster str. CFSAN004344	1410933	PRJNA224225	224225	Proteobacteria	Gammaproteobacteria	4.83697	52.2	-	AYUP01	271	5158	4731	12/10/13	2/26/17	Contig	FDA	SAMN02383572	GCA_000505485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/485/GCA_000505485.1_CFSAN004344_01.0	-	CFSAN004344
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69548	30.4	-	CUKH01	15	1815	1716	3/31/15	3/18/17	Scaffold	SC	SAMEA1010264	GCA_001229225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/225/GCA_001229225.1_7038_3_74	-	OXC6324
Listeria monocytogenes	1639	PRJNA342739	342739	Terrabacteria group	Firmicutes	2.96311	37.8	-	MJBT01	11	3018	2933	2/3/17	3/2/17	Contig	University of Malaya	SAMN05767734	GCA_001984485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/485/GCA_001984485.1_ASM198448v1	-	LM41
Mycobacterium tuberculosis M2479	1448801	PRJNA235813	235813	Terrabacteria group	Actinobacteria	4.41947	65.6	-	JKIY01	89	4347	4114	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599147	GCA_000665205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/205/GCA_000665205.1_Myco_tube_M2479_V1	-	M2479
Escherichia coli HVH 118 (4-7345399)	1281055	PRJNA186140	186140	Proteobacteria	Gammaproteobacteria	5.27487	50.7	-	AVWH01	16	5485	5128	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885767	GCA_000457715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/715/GCA_000457715.1_Esch_coli_HVH_118_4-7345399_V1	-	HVH 118 (4-7345399)
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.0986	39.7	-	CKHS01	45	2281	2023	3/21/15	3/11/17	Contig	SC	SAMEA1024086	GCA_001124125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/125/GCA_001124125.1_6631_3_11	-	type strain: N
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.94425	65.9	-	LLNV01	126	6683	6417	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128556	GCA_001450825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/825/GCA_001450825.1_WH-SGI-V-07371	26604259	WH-SGI-V-07371
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.02194	39	-	JWYN03	157	3928	3755	12/29/14	3/18/17	Contig	JCVI	SAMN03084733	GCA_000809425.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/425/GCA_000809425.3_ASM80942v3	-	UH315_39
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.09883	41.2	-	CZGX01	46	2136	2035	6/30/16	3/20/17	Scaffold	ACADEMIC MEDICAL CENTER	SAMEA3595263	GCA_900008055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/055/GCA_900008055.1_assembly_GD-0113	-	-
Mycoplasma mycoides subsp. mycoides	2103	PRJNA280355	280355	Terrabacteria group	Tenericutes	1.10938	24	chromosome:CP011263.1	-	1	1013	978	2/9/16	2/9/16	Complete Genome	Chinese National Human Genome Center at Shanghai	SAMN04479835	GCA_001554115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/115/GCA_001554115.1_ASM155411v1	-	Ben326
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.9771	50.5	-	FTYX01	463	5878	4794	1/28/17	2/26/17	Scaffold	SC	SAMEA3356052	GCA_900159285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/285/GCA_900159285.1_16703_8_35	-	3626STDY6095510
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.17327	28.6	-	FUQF01	38	3981	3808	2/14/17	2/23/17	Scaffold	SC	SAMEA3375150	GCA_900165355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/355/GCA_900165355.1_16780_8_84	-	VRECD0183
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.27519	57.4	-	JURV01	214	5199	5012	7/10/15	2/25/17	Contig	University of Washington	SAMN03198027	GCA_001066415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/415/GCA_001066415.1_ASM106641v1	26230489	813_KPNE
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.86954	64.2	-	FVMB01	5	4892	4770	3/10/17	3/18/17	Scaffold	SC	SAMEA2275707	GCA_900136005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/005/GCA_900136005.1_12163_1_56	-	981
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18522	64.2	-	FSIC01	44	5195	5033	12/14/16	3/21/17	Scaffold	SC	SAMEA2275708	GCA_900136015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/015/GCA_900136015.1_12163_1_57	-	982
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.4314	57.3	-	JUPH01	221	5339	5135	7/10/15	2/21/17	Contig	University of Washington	SAMN03198093	GCA_001066725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/725/GCA_001066725.1_ASM106672v1	26230489	887_KPNE
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.11044	28.9	-	FUQH01	33	3829	3677	2/14/17	2/23/17	Scaffold	SC	SAMEA3375151	GCA_900165365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/365/GCA_900165365.1_16780_8_85	-	VRECD0184
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.91462	50.4	-	FTZA01	443	5658	4745	1/28/17	2/26/17	Scaffold	SC	SAMEA3356054	GCA_900159295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/295/GCA_900159295.1_16703_8_37	-	3626STDY6095512
Streptococcus agalactiae MC634	1333578	PRJNA203073	203073	Terrabacteria group	Firmicutes	2.06879	35.3	-	ATON01	340	-	-	7/3/13	12/6/13	Scaffold	The Genome Institute	SAMN02436717	GCA_000418955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/955/GCA_000418955.1_S_agalactiaeMC634-1.0	-	MC634
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.26426	41.1	-	CZGW01	119	2295	2119	6/30/16	3/20/17	Scaffold	ACADEMIC MEDICAL CENTER	SAMEA3595262	GCA_900008065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/065/GCA_900008065.1_assembly_GD-0112	-	-
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.79444	39	-	JWYO03	85	3627	3505	12/29/14	3/18/17	Contig	JCVI	SAMN03084732	GCA_000809445.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/445/GCA_000809445.3_ASM80944v3	-	UH455_38
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.33577	66.5	-	LLNX01	63	6016	5864	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128558	GCA_001450835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/835/GCA_001450835.1_WH-SGI-V-07373	26604259	WH-SGI-V-07373
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05348	39.5	-	CODZ02	138	2248	2034	3/23/15	3/11/17	Contig	SC	SAMEA1463279	GCA_001124165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/165/GCA_001124165.2_7622_4_36	-	LE4118
Escherichia coli HVH 119 (4-6879578)	1281056	PRJNA186141	186141	Proteobacteria	Gammaproteobacteria	5.32949	50.7	-	AVWI01	12	5511	5210	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885768	GCA_000457735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/735/GCA_000457735.1_Esch_coli_HVH_119_4-6879578_V1	-	HVH 119 (4-6879578)
Mycobacterium tuberculosis M2384	1448802	PRJNA235814	235814	Terrabacteria group	Actinobacteria	4.41886	65.6	-	JKIX01	65	4317	4089	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599148	GCA_000665225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/225/GCA_000665225.1_Myco_tube_M2384_V1	-	M2384
Listeria monocytogenes	1639	PRJNA342740	342740	Terrabacteria group	Firmicutes	2.95699	37.9	-	MJBU01	28	2981	2910	2/3/17	3/2/17	Contig	University of Malaya	SAMN05767735	GCA_001984505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/505/GCA_001984505.1_ASM198450v1	-	LM115
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69378	30.4	-	CULU01	15	1810	1716	3/31/15	3/18/17	Scaffold	SC	SAMEA1010415	GCA_001229465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/465/GCA_001229465.1_7065_7_21	-	OXC6367
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN004345	1410937	PRJNA224226	224226	Proteobacteria	Gammaproteobacteria	4.73204	52.1	-	AYUO01	227	4949	4581	12/10/13	2/26/17	Contig	FDA	SAMN02383573	GCA_000505505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/505/GCA_000505505.1_CFSAN004345_01.0	-	CFSAN004345
Staphylococcus aureus M0774	1388569	PRJNA216742	216742	Terrabacteria group	Firmicutes	2.90949	32.8	-	JCOJ01	50	3068	2898	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325693	GCA_000543505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/505/GCA_000543505.1_Stap_aure_M0774_V1	-	M0774
Staphylococcus aureus M0775	1388570	PRJNA216743	216743	Terrabacteria group	Firmicutes	2.86317	32.9	-	JCOK01	38	3006	2837	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325694	GCA_000543525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/525/GCA_000543525.1_Stap_aure_M0775_V1	-	M0775
Salmonella enterica subsp. enterica serovar Montevideo str. CFSAN004346	1410936	PRJNA224227	224227	Proteobacteria	Gammaproteobacteria	4.89728	52.1	-	AYUN01	258	5206	4754	12/10/13	2/26/17	Contig	FDA	SAMN02383574	GCA_000505525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/525/GCA_000505525.1_CFSAN004346_01.0	-	CFSAN004346
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.65936	30.4	-	CUIB01	19	1751	1662	3/31/15	3/18/17	Scaffold	SC	SAMEA1010250	GCA_001230085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/085/GCA_001230085.1_7038_3_21	-	OXC6270
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	3.11168	37.8	-	MAKW01	32	3233	3129	3/3/17	3/6/17	Contig	FDA/CFSAN	SAMN03285319	GCA_002016665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/665/GCA_002016665.1_ASM201666v1	-	WAPHL_LIS_A00021
Mycobacterium tuberculosis M2508	1448803	PRJNA235815	235815	Terrabacteria group	Actinobacteria	4.40273	65.6	-	JKIW01	66	4322	4092	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599149	GCA_000665245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/245/GCA_000665245.1_Myco_tube_M2508_V1	-	M2508
Escherichia coli HVH 120 (4-6978681)	1281057	PRJNA186142	186142	Proteobacteria	Gammaproteobacteria	5.06053	50.5	-	AVWJ01	10	5176	4833	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885769	GCA_000457755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/755/GCA_000457755.1_Esch_coli_HVH_120_4-6978681_V1	-	HVH 120 (4-6978681)
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08715	39.7	-	CLCK01	55	2303	2040	3/21/15	3/11/17	Contig	SC	SAMEA1026187	GCA_001124345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/345/GCA_001124345.1_6871_2_4	-	SMRU1828
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.70759	66.1	-	LLOA01	101	6480	6280	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128561	GCA_001450865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/865/GCA_001450865.1_WH-SGI-V-07376	26604259	WH-SGI-V-07376
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.04487	39	-	JWYL03	142	3940	3808	12/29/14	3/18/17	Contig	JCVI	SAMN03084735	GCA_000809465.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/465/GCA_000809465.3_ASM80946v3	-	UH243_43
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.15454	41	-	CZDY01	121	2139	1983	6/30/16	3/20/17	Scaffold	ACADEMIC MEDICAL CENTER	SAMEA3595192	GCA_900008865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/865/GCA_900008865.1_assembly_2001171	-	-
Streptococcus agalactiae MC633	1333577	PRJNA203072	203072	Terrabacteria group	Firmicutes	2.05799	35.3	-	ATOO01	490	-	-	7/3/13	12/6/13	Scaffold	The Genome Institute	SAMN02436895	GCA_000418975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/418/975/GCA_000418975.1_S_agalactiaeMC633-1.0	-	MC633
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.92306	50.4	-	FTYY01	469	5621	4729	1/28/17	2/26/17	Scaffold	SC	SAMEA3356055	GCA_900159305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/305/GCA_900159305.1_16703_8_38	-	3626STDY6095513
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.25052	28.5	-	FUQI01	30	4050	3840	2/14/17	2/23/17	Scaffold	SC	SAMEA3375152	GCA_900165375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/375/GCA_900165375.1_16780_8_86	-	VRECD0185
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.41437	57.2	-	JUUH01	410	5418	5142	7/10/15	2/25/17	Contig	University of Washington	SAMN03197963	GCA_001067155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/155/GCA_001067155.1_ASM106715v1	26230489	755.rep2_KPNE
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.86849	64.2	-	FVMC01	11	4896	4767	3/10/17	3/18/17	Scaffold	SC	SAMEA2275709	GCA_900136025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/025/GCA_900136025.1_12163_1_58	-	983
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.14011	64.2	-	FSID01	29	5146	4997	12/14/16	3/21/17	Scaffold	SC	SAMEA2275710	GCA_900136035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/035/GCA_900136035.1_12163_1_59	-	984
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.4982	57.2	-	JUQD01	201	5493	5294	7/10/15	2/21/17	Contig	University of Washington	SAMN03198071	GCA_001067575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/575/GCA_001067575.1_ASM106757v1	26230489	863_KPNE
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.16958	28.4	-	FUQK01	30	3893	3739	2/14/17	2/23/17	Scaffold	SC	SAMEA3375157	GCA_900165385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/385/GCA_900165385.1_16780_8_91	-	VRECD0190
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.74072	50.7	-	FTYZ01	412	5394	4575	1/28/17	2/26/17	Scaffold	SC	SAMEA3356056	GCA_900159315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/315/GCA_900159315.1_16703_8_39	-	3626STDY6095514
Streptococcus agalactiae MC632	1333576	PRJNA203071	203071	Terrabacteria group	Firmicutes	2.0379	35.2	-	ATOP01	308	-	-	7/3/13	12/6/13	Scaffold	The Genome Institute	SAMN02436824	GCA_000419015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/015/GCA_000419015.1_S_agalactiaeMC632-1.0	-	MC632
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.27435	41.2	-	CZGB01	74	2343	2153	6/30/16	3/20/17	Scaffold	ACADEMIC MEDICAL CENTER	SAMEA3595247	GCA_900009195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/195/GCA_900009195.1_assembly_GD-0081	-	-
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.18465	39	-	JWVM03	176	4114	3966	12/29/14	3/18/17	Contig	JCVI	SAMN03084817	GCA_000809485.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/485/GCA_000809485.3_ASM80948v3	-	UH532_387
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.90707	66.2	-	LLOG01	114	6654	6448	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128567	GCA_001450875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/875/GCA_001450875.1_WH-SGI-V-07382	26604259	WH-SGI-V-07382
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.16056	39.8	-	CKWI01	51	2368	2154	3/21/15	3/11/17	Contig	SC	SAMEA1025749	GCA_001124465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/465/GCA_001124465.1_6823_5_15	-	SMRU1959
Escherichia coli HVH 121 (4-6877826)	1281058	PRJNA186143	186143	Proteobacteria	Gammaproteobacteria	5.42421	50.7	-	AVWK01	12	5586	5149	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885770	GCA_000457775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/775/GCA_000457775.1_Esch_coli_HVH_121_4-6877826_V1	-	HVH 121 (4-6877826)
Mycobacterium tuberculosis H1329	1448804	PRJNA235816	235816	Terrabacteria group	Actinobacteria	4.3772	65.6	-	JKIV01	76	4316	4101	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599150	GCA_000665265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/265/GCA_000665265.1_Myco_tube_H1329_V1	-	H1329
Listeria monocytogenes	1639	PRJNA371539	371539	Terrabacteria group	Firmicutes	2.90951	37.9	-	MUZG01	7	2977	2886	3/15/17	3/17/17	Contig	University College Cork	SAMN06309513	GCA_002027805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/805/GCA_002027805.1_ASM202780v1	-	MQ130026
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.78644	30.1	-	CUPJ01	20	1893	1731	3/31/15	3/18/17	Scaffold	SC	SAMEA1010636	GCA_001230345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/345/GCA_001230345.1_7092_1_19	-	OXC6466
Salmonella enterica subsp. enterica serovar Infantis str. 119944	1329901	PRJNA201014	201014	Proteobacteria	Gammaproteobacteria	4.9785	52.2	-	ASRF01	108	5083	4764	12/11/13	2/26/17	Contig	Sheba Medical center	SAMN02470974	GCA_000506925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/925/GCA_000506925.1_SI119944	24320043	119944
Staphylococcus aureus M0777	1388571	PRJNA216744	216744	Terrabacteria group	Firmicutes	2.81162	32.8	-	JCOL01	44	2914	2728	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325695	GCA_000543545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/545/GCA_000543545.1_Stap_aure_M0777_V1	-	M0777
Staphylococcus aureus M0779	1388573	PRJNA216746	216746	Terrabacteria group	Firmicutes	2.86316	32.8	-	JCOM01	41	3012	2839	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325697	GCA_000543565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/565/GCA_000543565.1_Stap_aure_M0779_V1	-	M0779
Salmonella enterica subsp. enterica serovar Infantis str. 335-3	1347789	PRJNA208777	208777	Proteobacteria	Gammaproteobacteria	4.65669	52.3	-	ATHK01	114	4734	4463	12/11/13	2/26/17	Contig	Sheba Medical Center	SAMN02470973	GCA_000506945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/945/GCA_000506945.1_S._Infantis_strain_335-3	24320043	335-3
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69996	30.3	-	CUQB01	24	1787	1685	3/31/15	3/18/17	Scaffold	SC	SAMEA1010367	GCA_001230865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/865/GCA_001230865.1_7092_1_36	-	OXC6483
Listeria monocytogenes	1639	PRJNA371539	371539	Terrabacteria group	Firmicutes	2.96139	37.9	-	MVED01	8	3046	2955	3/15/17	3/17/17	Contig	University College Cork	SAMN06309514	GCA_002027825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/825/GCA_002027825.1_ASM202782v1	-	MQ130029
Mycobacterium tuberculosis H1578	1448805	PRJNA235817	235817	Terrabacteria group	Actinobacteria	4.42238	65.6	-	JKIU01	74	4316	4105	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599151	GCA_000665285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/285/GCA_000665285.1_Myco_tube_H1578_V1	-	H1578
Escherichia coli HVH 122 (4-6851606)	1281059	PRJNA186144	186144	Proteobacteria	Gammaproteobacteria	5.32857	50.7	-	AVWL01	14	5559	5229	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885771	GCA_000457795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/795/GCA_000457795.1_Esch_coli_HVH_122_4-6851606_V1	-	HVH 122 (4-6851606)
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.07627	39.8	-	CMJF01	64	2293	2085	3/23/15	3/11/17	Contig	SC	SAMEA1029358	GCA_001124485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/485/GCA_001124485.1_7038_7_8	-	SMRU3008
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.03785	66	-	LLOJ01	168	6849	6571	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128570	GCA_001450905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/905/GCA_001450905.1_WH-SGI-V-07385	26604259	WH-SGI-V-07385
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.98067	39.1	-	JWYK03	112	3793	3653	12/29/14	3/18/17	Contig	JCVI	SAMN03084736	GCA_000809505.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/505/GCA_000809505.3_ASM80950v3	-	UH17_52
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.04742	41.2	-	CZHD01	40	2065	1956	6/30/16	3/20/17	Scaffold	ACADEMIC MEDICAL CENTER	SAMEA3595270	GCA_900009645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/645/GCA_900009645.1_assembly_S3	-	-
Streptococcus agalactiae MC631	1333575	PRJNA203070	203070	Terrabacteria group	Firmicutes	2.04887	35.2	-	ATOQ01	314	-	-	7/3/13	12/6/13	Scaffold	The Genome Institute	SAMN02436763	GCA_000419035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/035/GCA_000419035.1_S_agalactiaeMC631-1.0	-	MC631
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.81331	50.4	-	FTZC01	436	5454	4610	1/28/17	2/26/17	Scaffold	SC	SAMEA3356060	GCA_900159325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/325/GCA_900159325.1_16703_8_43	-	3626STDY6095518
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.24503	28.5	-	FUQO01	45	3988	3830	2/14/17	2/23/17	Scaffold	SC	SAMEA3375156	GCA_900165395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/395/GCA_900165395.1_16780_8_90	-	VRECD0189
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.43793	57.3	-	JUOE01	434	5400	5076	7/10/15	2/21/17	Contig	University of Washington	SAMN03198122	GCA_001067895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/895/GCA_001067895.1_ASM106789v1	26230489	913_KPNE
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.27595	64.2	-	FSIE01	33	5313	5156	12/14/16	3/21/17	Scaffold	SC	SAMEA2275712	GCA_900136045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/045/GCA_900136045.1_12163_1_61	-	986
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.1896	63.9	-	FVMD01	46	5198	5071	3/10/17	3/18/17	Scaffold	SC	SAMEA2275711	GCA_900136055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/055/GCA_900136055.1_12163_1_60	-	985
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.44283	57.3	-	JUND01	263	5388	5104	7/10/15	2/21/17	Contig	University of Washington	SAMN03198149	GCA_001067955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/955/GCA_001067955.1_ASM106795v1	26230489	930_KPNE
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.17232	28.4	-	FUQL01	48	3896	3741	2/14/17	2/23/17	Scaffold	SC	SAMEA3375158	GCA_900165405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/405/GCA_900165405.1_16780_8_92	-	VRECD0191
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.85834	50.6	-	FTZB01	440	5574	4638	1/28/17	2/26/17	Scaffold	SC	SAMEA3356062	GCA_900159335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/335/GCA_900159335.1_16703_8_45	-	3626STDY6095520
Streptococcus agalactiae 112469214-isolate1	1333579	PRJNA203074	203074	Terrabacteria group	Firmicutes	2.06768	35.3	-	ATPC01	320	-	-	7/3/13	12/6/13	Scaffold	The Genome Institute	SAMN02436718	GCA_000419275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/419/275/GCA_000419275.1_S_agalactiae112469214-isolate1-1.0	-	112469214-isolate1
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.3205	41.1	-	CZEZ01	113	2401	2221	6/30/16	3/20/17	Scaffold	ACADEMIC MEDICAL CENTER	SAMEA3595212	GCA_900010265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/265/GCA_900010265.1_assembly_GD-0006	-	-
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.04414	38.9	-	JWXZ03	125	3938	3807	12/29/14	3/18/17	Contig	JCVI	SAMN03084747	GCA_000809525.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/525/GCA_000809525.3_ASM80952v3	-	UH243_68
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.83811	66	-	LLOF01	143	6607	6359	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128566	GCA_001450925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/925/GCA_001450925.1_WH-SGI-V-07381	26604259	WH-SGI-V-07381
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.16005	39.6	-	CKTA01	63	2380	2168	3/21/15	3/11/17	Contig	SC	SAMEA1025760	GCA_001124505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/505/GCA_001124505.1_6823_1_23	-	SMRU1871
Escherichia coli HVH 125 (4-2634716)	1281060	PRJNA186145	186145	Proteobacteria	Gammaproteobacteria	5.24356	50.4	-	AVWM01	14	5397	4997	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885772	GCA_000457815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/815/GCA_000457815.1_Esch_coli_HVH_125_4-2634716_V1	-	HVH 125 (4-2634716)
Mycobacterium tuberculosis H1580	1448806	PRJNA235818	235818	Terrabacteria group	Actinobacteria	4.42222	65.6	-	JKIT01	73	4328	4093	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599152	GCA_000665305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/305/GCA_000665305.1_Myco_tube_H1580_V1	-	H1580
Listeria monocytogenes	1639	PRJNA371539	371539	Terrabacteria group	Firmicutes	2.91205	37.9	-	MVEE01	7	2979	2884	3/15/17	3/17/17	Contig	University College Cork	SAMN06309515	GCA_002027845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/845/GCA_002027845.1_ASM202784v1	-	MQ130032
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.83256	30	-	CUOP01	48	1988	1822	3/31/15	3/18/17	Scaffold	SC	SAMEA1010353	GCA_001231405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/405/GCA_001231405.1_7065_7_87	-	OXC6435
Salmonella enterica subsp. enterica serovar Typhi str. STH2370	1443995	PRJNA233520	233520	Proteobacteria	Gammaproteobacteria	4.75761	52.1	-	JABZ01	53	4957	4598	1/27/14	3/1/17	Contig	Universidad de Chile	SAMN02569978	GCA_000523415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/415/GCA_000523415.2_STH2370v1	24558245	STH2370
Staphylococcus aureus M0782	1388574	PRJNA216747	216747	Terrabacteria group	Firmicutes	2.9008	32.8	-	JCON01	58	3073	2894	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325698	GCA_000543585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/585/GCA_000543585.1_Stap_aure_M0782_V1	-	M0782
Staphylococcus aureus M0783	1388575	PRJNA216748	216748	Terrabacteria group	Firmicutes	2.89741	32.8	-	JCOO01	59	3076	2900	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325699	GCA_000543605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/605/GCA_000543605.1_Stap_aure_M0783_V1	-	M0783
Salmonella enterica subsp. enterica serovar Bovismorbificans str. Sal185	1429917	PRJNA230004	230004	Proteobacteria	Gammaproteobacteria	4.7543	52.1	-	AZKO02	143	4904	4612	12/19/13	2/26/17	Contig	"OARSA, CFSAN"	SAMN02422601	GCA_000524415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/415/GCA_000524415.1_sal185_version2	-	Sal185
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70481	30.4	-	CUOK01	24	1807	1704	3/31/15	4/21/17	Scaffold	SC	SAMEA1010255	GCA_001232325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/325/GCA_001232325.1_7065_7_82	-	OXC6430
Listeria monocytogenes	1639	PRJNA371539	371539	Terrabacteria group	Firmicutes	2.96362	37.8	-	MVEH01	8	3054	2968	3/15/17	3/17/17	Contig	University College Cork	SAMN06309519	GCA_002027865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/865/GCA_002027865.1_ASM202786v1	-	MQ130058
Mycobacterium tuberculosis H1589	1448807	PRJNA235819	235819	Terrabacteria group	Actinobacteria	4.42402	65.6	-	JKIS01	68	4307	4090	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599153	GCA_000665325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/325/GCA_000665325.1_Myco_tube_H1589_V1	-	H1589
Escherichia coli HVH 126 (4-6034225)	1281061	PRJNA186146	186146	Proteobacteria	Gammaproteobacteria	5.59521	50.6	-	AVWN01	19	5809	5431	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885773	GCA_000457835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/835/GCA_000457835.1_Esch_coli_HVH_126_4-6034225_V1	-	HVH 126 (4-6034225)
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12757	39.6	-	CLXK01	59	2347	2130	3/21/15	3/11/17	Contig	SC	SAMEA1028674	GCA_001124545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/545/GCA_001124545.1_6983_5_6	-	SMRU2310
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.71935	66.3	-	LLNM01	77	6466	6253	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128547	GCA_001450935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/935/GCA_001450935.1_WH-SGI-V-07241	26604259	WH-SGI-V-07241
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.03705	39	-	JWXY03	170	3936	3796	12/29/14	3/18/17	Contig	JCVI	SAMN03084748	GCA_000809545.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/545/GCA_000809545.3_ASM80954v3	-	UH243_73
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	1.98311	41.2	-	CZGZ01	41	1991	1898	6/30/16	3/20/17	Scaffold	ACADEMIC MEDICAL CENTER	SAMEA3595264	GCA_900010285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/285/GCA_900010285.1_assembly_GD-0114	-	-
Streptococcus agalactiae 18RS21	342613	PRJNA15605	15605	Terrabacteria group	Firmicutes	2.19309	36.9	-	AAJO01	553	2236	2146	9/30/05	12/5/13	Contig	TIGR	SAMN02435897	GCA_000167715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/715/GCA_000167715.1_ASM16771v1	16172379	18RS21
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.67499	50.7	-	FTZD01	384	5245	4491	1/28/17	2/26/17	Scaffold	SC	SAMEA3356066	GCA_900159345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/345/GCA_900159345.1_16703_8_49	-	3626STDY6095524
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.24328	28.5	-	FUQN01	42	4004	3832	2/14/17	2/23/17	Scaffold	SC	SAMEA3375155	GCA_900165415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/415/GCA_900165415.1_16780_8_89	-	VRECD0188
Klebsiella pneumoniae subsp. ozaenae	574	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.4424	57.3	-	JULI01	181	5343	5112	7/10/15	2/21/17	Contig	University of Washington	SAMN03198196	GCA_001067975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/975/GCA_001067975.1_ASM106797v1	26230489	977.rep1_SDYS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23196	64	-	FVMF01	24	5274	5146	3/10/17	3/18/17	Scaffold	SC	SAMEA2275714	GCA_900136065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/065/GCA_900136065.1_12163_1_63	-	988
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23075	64	-	FVME01	27	5268	5142	3/10/17	3/18/17	Scaffold	SC	SAMEA2275715	GCA_900136075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/075/GCA_900136075.1_12163_1_64	-	989
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.17352	57.5	-	JULE01	558	5321	4849	7/10/15	2/21/17	Contig	University of Washington	SAMN03198200	GCA_001068035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/035/GCA_001068035.1_ASM106803v1	26230489	98_KPNE
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.07861	28.4	-	FUQJ01	36	3794	3632	2/14/17	2/23/17	Scaffold	SC	SAMEA3375154	GCA_900165425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/425/GCA_900165425.1_16780_8_88	-	VRECD0187
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.88454	50.4	-	FTZE01	440	5551	4682	1/28/17	2/26/17	Scaffold	SC	SAMEA3356068	GCA_900159355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/355/GCA_900159355.1_16703_8_51	-	3626STDY6095526
Streptococcus agalactiae 515	342614	PRJNA15606	15606	Terrabacteria group	Firmicutes	2.08823	35.3	-	AAJP01	255	2279	2275	10/6/05	12/5/13	Contig	TIGR	SAMN02435850	GCA_000167735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/735/GCA_000167735.1_ASM16773v1	16172379	515
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.04247	41.1	-	CZEU01	38	2050	1955	6/30/16	3/20/17	Scaffold	ACADEMIC MEDICAL CENTER	SAMEA3595184	GCA_900010435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/435/GCA_900010435.1_assembly_940056	-	-
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.04521	38.9	-	JWXX03	126	3943	3805	12/29/14	3/18/17	Contig	JCVI	SAMN03084749	GCA_000809565.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/565/GCA_000809565.3_ASM80956v3	-	UH487_78
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.79218	66.1	-	LLOK01	86	6535	6354	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128571	GCA_001450985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/985/GCA_001450985.1_WH-SGI-V-07386	26604259	WH-SGI-V-07386
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.04983	39.7	-	CMPE01	42	2232	1981	3/22/15	3/11/17	Contig	SC	SAMEA2061501	GCA_001124585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/585/GCA_001124585.1_9803_7_48	-	type strain: N
Escherichia coli HVH 127 (4-7303629)	1281062	PRJNA186147	186147	Proteobacteria	Gammaproteobacteria	5.26961	50.6	-	AVWO01	18	5371	5002	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885774	GCA_000457855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/855/GCA_000457855.1_Esch_coli_HVH_127_4-7303629_V1	-	HVH 127 (4-7303629)
Mycobacterium tuberculosis H1856	1448808	PRJNA235820	235820	Terrabacteria group	Actinobacteria	4.38838	65.6	-	JKIR01	83	4321	4105	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599154	GCA_000665345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/345/GCA_000665345.1_Myco_tube_H1856_V1	-	H1856
Listeria monocytogenes	1639	PRJNA371539	371539	Terrabacteria group	Firmicutes	3.10917	37.7	-	MVEI01	12	3249	3140	3/15/17	3/17/17	Contig	University College Cork	SAMN06309520	GCA_002027885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/885/GCA_002027885.1_ASM202788v1	-	MQ140011
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.69542	30.4	-	CUVV01	17	1810	1723	3/31/15	4/21/17	Scaffold	SC	SAMEA1401533	GCA_001232565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/565/GCA_001232565.1_7213_3_9	-	OXC6552
Salmonella enterica subsp. enterica serovar Bovismorbificans str. Sal644	1432046	PRJNA230004	230004	Proteobacteria	Gammaproteobacteria	4.76597	52.2	-	AZLC01	153	4894	4615	12/19/13	2/26/17	Contig	"OARSA, CFSAN"	SAMN02422688	GCA_000524705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/705/GCA_000524705.1_sal644	-	Sal644
Staphylococcus aureus M0784	1388576	PRJNA216749	216749	Terrabacteria group	Firmicutes	2.89372	32.8	-	JCOP01	60	3073	2888	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325700	GCA_000543625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/625/GCA_000543625.1_Stap_aure_M0784_V1	-	M0784
Staphylococcus aureus M0785	1388577	PRJNA216750	216750	Terrabacteria group	Firmicutes	2.86836	32.8	-	JCOQ01	42	3026	2844	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325701	GCA_000543645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/645/GCA_000543645.1_Stap_aure_M0785_V1	-	M0785
Salmonella enterica subsp. enterica serovar Bovismorbificans str. Sal683	1432047	PRJNA230004	230004	Proteobacteria	Gammaproteobacteria	4.57468	52.2	-	AZKP01	133	4660	4332	12/19/13	2/26/17	Contig	"OARSA, CFSAN"	SAMN02422689	GCA_000524725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/725/GCA_000524725.1_sal683	-	Sal683
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.84052	30.1	-	CUUZ01	54	1951	1800	3/31/15	3/18/17	Scaffold	SC	SAMEA1401505	GCA_001232665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/665/GCA_001232665.1_7213_3_7	-	OXC6550
Listeria monocytogenes	1639	PRJNA371539	371539	Terrabacteria group	Firmicutes	3.10788	37.7	-	MVEJ01	11	3241	3141	3/15/17	3/17/17	Contig	University College Cork	SAMN06309521	GCA_002027905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/905/GCA_002027905.1_ASM202790v1	-	MQ140012
Mycobacterium tuberculosis H2101	1448810	PRJNA235822	235822	Terrabacteria group	Actinobacteria	4.40689	65.6	-	JKIQ01	78	4318	4092	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599156	GCA_000665365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/365/GCA_000665365.1_Myco_tube_H2101_V1	-	H2101
Escherichia coli HVH 128 (4-7030436)	1281063	PRJNA186149	186149	Proteobacteria	Gammaproteobacteria	5.34368	50.4	-	AVWP01	16	5427	5049	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885775	GCA_000457875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/875/GCA_000457875.1_Esch_coli_HVH_128_4-7030436_V1	-	HVH 128 (4-7030436)
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.07303	39.6	-	CLNZ01	70	2295	2057	3/21/15	3/11/17	Contig	SC	SAMEA1028956	GCA_001124605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/605/GCA_001124605.1_6949_1_14	-	SMRU2414
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.56696	66.2	-	LLOL01	88	6235	6041	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128572	GCA_001450995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/995/GCA_001450995.1_WH-SGI-V-07387	26604259	WH-SGI-V-07387
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.15293	39	-	JWXW03	221	4079	3928	12/29/14	3/18/17	Contig	JCVI	SAMN03084750	GCA_000809585.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/585/GCA_000809585.3_ASM80958v3	-	UH280_81
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.15714	41.2	-	CZFF01	75	2192	2039	6/30/16	3/20/17	Scaffold	ACADEMIC MEDICAL CENTER	SAMEA3595220	GCA_900010455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/455/GCA_900010455.1_assembly_GD-0021	-	-
Streptococcus agalactiae COH1	342616	PRJNA15609	15609	Terrabacteria group	Firmicutes	2.20544	35.5	-	AAJR01	393	2385	2376	10/6/05	12/5/13	Contig	TIGR	SAMN02435877	GCA_000167775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/775/GCA_000167775.1_ASM16777v1	16172379	COH1
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.81986	50.5	-	FTZF01	424	5465	4606	1/28/17	2/26/17	Scaffold	SC	SAMEA1569864	GCA_900159365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/365/GCA_900159365.1_8489_1_59	-	sh1347
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.28021	28.7	-	FUQM01	34	4016	3853	2/14/17	2/23/17	Scaffold	SC	SAMEA3375159	GCA_900165435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/435/GCA_900165435.1_16780_8_93	-	VRECD0192
Klebsiella pneumoniae subsp. ozaenae	574	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.45122	57.3	-	JULH01	161	5352	5125	7/10/15	2/21/17	Contig	University of Washington	SAMN03198197	GCA_001068335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/335/GCA_001068335.1_ASM106833v1	26230489	977.rep2_SDYS
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.1749	64.1	-	FVMH01	20	5224	5099	3/10/17	3/18/17	Scaffold	SC	SAMEA2275720	GCA_900136085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/085/GCA_900136085.1_12163_1_68	-	994
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.11392	64.1	-	FVMG01	21	5148	5015	3/10/17	3/18/17	Scaffold	SC	SAMEA2275718	GCA_900136095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/095/GCA_900136095.1_12163_1_66	-	992
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.44211	57.3	-	JUOG01	201	5344	5113	7/10/15	2/21/17	Contig	University of Washington	SAMN03198121	GCA_001077215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/215/GCA_001077215.1_ASM107721v1	26230489	912_KPNE
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.14666	28.5	-	FUQP01	27	3897	3727	2/14/17	2/23/17	Scaffold	SC	SAMEA3374979	GCA_900165455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/455/GCA_900165455.1_16852_2_7	-	VRECD0019
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.75692	50.5	-	FTZG01	408	5394	4502	1/28/17	2/26/17	Scaffold	SC	SAMEA1569854	GCA_900159375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/375/GCA_900159375.1_8489_1_60	-	sh1348
Streptococcus agalactiae H36B	342615	PRJNA15608	15608	Terrabacteria group	Firmicutes	2.20115	35.6	-	AAJS01	345	2382	2376	10/6/05	12/5/13	Contig	TIGR	SAMN02435895	GCA_000167795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/795/GCA_000167795.1_ASM16779v1	16172379	H36B
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.34175	41.2	-	CZEC01	68	2431	2246	6/30/16	3/20/17	Scaffold	ACADEMIC MEDICAL CENTER	SAMEA3595211	GCA_900011035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/035/GCA_900011035.1_assembly_GD-0004	-	-
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.90687	38.9	-	JWXV03	154	3771	3646	12/29/14	3/18/17	Contig	JCVI	SAMN03084751	GCA_000809605.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/605/GCA_000809605.3_ASM80960v3	-	UH236_84
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.72737	66.1	-	LLON01	116	6495	6293	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128574	GCA_001451015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/015/GCA_001451015.1_WH-SGI-V-07389	26604259	WH-SGI-V-07389
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.12209	39.6	-	CKKV01	71	2369	2139	3/21/15	3/11/17	Contig	SC	SAMEA1023718	GCA_001124665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/665/GCA_001124665.1_6631_7_21	-	35C
Escherichia coli HVH 130 (4-7036876)	1281064	PRJNA186151	186151	Proteobacteria	Gammaproteobacteria	5.53062	50.7	-	AVWQ01	22	5659	5314	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885776	GCA_000457895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/895/GCA_000457895.1_Esch_coli_HVH_130_4-7036876_V1	-	HVH 130 (4-7036876)
Mycobacterium tuberculosis H2102	1448811	PRJNA235823	235823	Terrabacteria group	Actinobacteria	4.40669	65.6	-	JKIP01	88	4305	4087	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599157	GCA_000665385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/385/GCA_000665385.1_Myco_tube_H2102_V1	-	H2102
Listeria monocytogenes	1639	PRJNA371539	371539	Terrabacteria group	Firmicutes	2.86351	37.9	-	MVEK01	7	2905	2811	3/15/17	3/17/17	Contig	University College Cork	SAMN06309522	GCA_002027925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/925/GCA_002027925.1_ASM202792v1	-	MQ140025
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66447	30.5	-	CUQM01	17	1762	1664	3/31/15	3/18/17	Scaffold	SC	SAMEA1010288	GCA_001232885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/885/GCA_001232885.1_7092_1_46	-	OXC6493
Salmonella enterica subsp. enterica serovar Bovismorbificans str. Sal677	1430429	PRJNA230004	230004	Proteobacteria	Gammaproteobacteria	4.63486	52.2	-	AZKR01	101	4695	4396	12/19/13	2/26/17	Contig	"OARSA, CFSAN"	SAMN02422693	GCA_000524745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/745/GCA_000524745.1_sal677	-	Sal677
Staphylococcus aureus M0786	1388578	PRJNA216751	216751	Terrabacteria group	Firmicutes	2.86143	32.8	-	JCOR01	47	3020	2857	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325702	GCA_000543665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/665/GCA_000543665.1_Stap_aure_M0786_V1	-	M0786
Staphylococcus aureus M0788	1388579	PRJNA216752	216752	Terrabacteria group	Firmicutes	2.87247	32.8	-	JCOS01	61	3035	2867	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325703	GCA_000543685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/685/GCA_000543685.1_Stap_aure_M0788_V1	-	M0788
Salmonella enterica subsp. enterica serovar Bovismorbificans str. Sal678	1430430	PRJNA230004	230004	Proteobacteria	Gammaproteobacteria	4.57978	52.2	-	AZKS01	164	4684	4334	12/19/13	2/26/17	Contig	"OARSA, CFSAN"	SAMN02422694	GCA_000524765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/765/GCA_000524765.1_sal678	-	Sal678
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66564	30.4	-	CUPD01	15	1753	1660	3/31/15	3/18/17	Scaffold	SC	SAMEA1010595	GCA_001232905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/905/GCA_001232905.1_7092_1_14	-	OXC6461
Listeria monocytogenes	1639	PRJNA371539	371539	Terrabacteria group	Firmicutes	2.91557	37.9	-	MVEL01	8	3005	2908	3/15/17	3/17/17	Contig	University College Cork	SAMN06309523	GCA_002027935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/935/GCA_002027935.1_ASM202793v1	-	MQ140029
Mycobacterium tuberculosis H2300	1448812	PRJNA235824	235824	Terrabacteria group	Actinobacteria	4.38335	65.6	-	JKIO01	84	4325	4117	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599158	GCA_000665405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/405/GCA_000665405.1_Myco_tube_H2300_V1	-	H2300
Escherichia coli HVH 132 (4-6876862)	1281065	PRJNA186153	186153	Proteobacteria	Gammaproteobacteria	5.25654	50.3	-	AVWR01	17	5397	5002	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885777	GCA_000457915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/915/GCA_000457915.1_Esch_coli_HVH_132_4-6876862_V1	-	HVH 132 (4-6876862)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05813	39.7	-	CNPT02	162	2230	2034	3/22/15	3/11/17	Contig	SC	SAMEA1032569	GCA_001124765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/765/GCA_001124765.2_6952_4_21	-	503574
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.72402	66.1	-	LLOO01	105	6500	6288	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128575	GCA_001451025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/025/GCA_001451025.1_WH-SGI-V-07390	26604259	WH-SGI-V-07390
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.90418	38.9	-	JWXU03	139	3763	3631	12/29/14	3/18/17	Contig	JCVI	SAMN03084752	GCA_000809625.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/625/GCA_000809625.3_ASM80962v3	-	UH236_85
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.15529	41	-	CZFZ01	124	2205	2043	6/30/16	3/20/17	Scaffold	ACADEMIC MEDICAL CENTER	SAMEA3595236	GCA_900011215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/215/GCA_900011215.1_assembly_GD-0061	-	-
Streptococcus agalactiae FSL S3-026	876138	PRJNA46683	46683	Terrabacteria group	Firmicutes	2.45585	36.1	-	AEXT01	8	2422	2334	7/25/11	12/5/13	Contig	"Population Medicine and Diagnostic Sciences, Cornell University"	SAMN02428925	GCA_000221325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/325/GCA_000221325.2_ASM22132v2	21536150	FSL S3-026
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.74441	50.5	-	FTZH01	417	5367	4503	1/28/17	2/26/17	Scaffold	SC	SAMEA1569902	GCA_900159385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/385/GCA_900159385.1_8489_1_61	-	sh1349
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.01145	28.3	-	FUQR01	25	3725	3580	2/14/17	2/23/17	Scaffold	SC	SAMEA3374980	GCA_900165465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/465/GCA_900165465.1_16852_2_8	-	VRECD0021
Klebsiella pneumoniae	573	PRJEB7661	288866	Proteobacteria	Gammaproteobacteria	5.78267	57.1	-	CDFM01	153	5981	5676	7/2/15	2/21/17	Contig	UNIMI	SAMEA3108417	GCA_001182385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/385/GCA_001182385.1_KpVA-1	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.08396	64.1	-	FSIF01	25	5093	4975	12/14/16	3/21/17	Scaffold	SC	SAMEA2275713	GCA_900136105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/105/GCA_900136105.1_12163_1_62	-	987
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.17815	64.1	-	FSIJ01	18	5218	5099	12/14/16	3/21/17	Scaffold	SC	SAMEA2275722	GCA_900136115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/115/GCA_900136115.1_12163_1_70	-	996
Klebsiella pneumoniae	573	PRJEB7661	288866	Proteobacteria	Gammaproteobacteria	5.59464	57.2	-	CDFP01	127	5718	5430	7/2/15	2/21/17	Contig	UNIMI	SAMEA3108418	GCA_001182405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/405/GCA_001182405.1_KpVA-2	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.24086	28.5	-	FUQQ01	33	4004	3832	2/14/17	2/23/17	Scaffold	SC	SAMEA3374981	GCA_900165475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/475/GCA_900165475.1_16852_2_9	-	VRECD0020
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.78722	50.6	-	FTZI01	435	5448	4591	1/28/17	2/26/17	Scaffold	SC	SAMEA1569891	GCA_900159395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/395/GCA_900159395.1_8489_1_62	-	sh1350
Streptococcus agalactiae CCUG 38383	1154815	PRJNA86239	86239	Terrabacteria group	Firmicutes	2.00954	35.2	-	ALQS01	32	1971	1819	8/15/12	11/19/13	Contig	The J. Craig Venter Institute	SAMN00991106	GCA_000288835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/288/835/GCA_000288835.1_ASM28883v1	-	CCUG 38383
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.15454	41	-	CZGY01	117	2146	1982	6/30/16	3/20/17	Scaffold	ACADEMIC MEDICAL CENTER	SAMEA3595266	GCA_900011555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/555/GCA_900011555.1_assembly_GD-0119	-	-
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.887	39	-	JWXT03	188	3760	3628	12/29/14	3/18/17	Contig	JCVI	SAMN03084753	GCA_000809645.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/645/GCA_000809645.3_ASM80964v3	-	UH236_87
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.02115	65.9	-	LLOQ01	163	6819	6509	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128577	GCA_001451065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/065/GCA_001451065.1_WH-SGI-V-07392	26604259	WH-SGI-V-07392
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06321	39.5	-	CNYZ02	130	2223	2022	3/23/15	3/5/17	Contig	SC	SAMEA1463171	GCA_001124845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/845/GCA_001124845.2_7553_5_51	-	NP7081
Escherichia coli HVH 133 (4-4466519)	1281066	PRJNA186155	186155	Proteobacteria	Gammaproteobacteria	5.28192	50.6	-	AVWS01	8	5383	5078	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885778	GCA_000457935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/935/GCA_000457935.1_Esch_coli_HVH_133_4-4466519_V1	-	HVH 133 (4-4466519)
Mycobacterium tuberculosis H2438	1448813	PRJNA235825	235825	Terrabacteria group	Actinobacteria	4.41243	65.6	-	JKIN01	80	4303	4081	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599159	GCA_000665425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/425/GCA_000665425.1_Myco_tube_H2438_V1	-	H2438
Listeria monocytogenes	1639	PRJNA371539	371539	Terrabacteria group	Firmicutes	2.86662	37.9	-	MVEM01	10	2894	2816	3/15/17	3/17/17	Contig	University College Cork	SAMN06309524	GCA_002027965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/965/GCA_002027965.1_ASM202796v1	-	MQ140030
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66747	30.5	-	CUSC01	23	1773	1673	3/31/15	3/18/17	Scaffold	SC	SAMEA1010440	GCA_001233685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/685/GCA_001233685.1_7092_1_84	-	OXC6531
Salmonella enterica subsp. enterica serovar Bovismorbificans str. Sal679	1430431	PRJNA230004	230004	Proteobacteria	Gammaproteobacteria	4.56703	52.2	-	AZKT01	103	4613	4333	12/19/13	2/26/17	Contig	"OARSA, CFSAN"	SAMN02422695	GCA_000524785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/785/GCA_000524785.1_sal679	-	Sal679
Staphylococcus aureus M0789	1388580	PRJNA216753	216753	Terrabacteria group	Firmicutes	2.91333	32.9	-	JCOT01	80	3092	2918	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325704	GCA_000543705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/705/GCA_000543705.1_Stap_aure_M0789_V1	-	M0789
Staphylococcus aureus M0790	1388581	PRJNA216754	216754	Terrabacteria group	Firmicutes	2.81058	32.8	-	JCOU01	45	2932	2733	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325705	GCA_000543725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/725/GCA_000543725.1_Stap_aure_M0790_V1	-	M0790
Salmonella enterica subsp. enterica serovar Bovismorbificans str. Sal676	1430434	PRJNA230004	230004	Proteobacteria	Gammaproteobacteria	4.56906	52.2	-	AZKV01	102	4613	4330	12/19/13	2/26/17	Contig	"OARSA, CFSAN"	SAMN02422698	GCA_000524805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/805/GCA_000524805.1_sal676	-	Sal676
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70183	30.4	-	CUUT01	19	1804	1713	3/31/15	3/18/17	Scaffold	SC	SAMEA1401549	GCA_001233745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/745/GCA_001233745.1_7213_3_61	-	OXC6604
Listeria monocytogenes	1639	PRJNA371539	371539	Terrabacteria group	Firmicutes	2.90477	37.9	-	MVEN01	8	2975	2879	3/15/17	3/17/17	Contig	University College Cork	SAMN06309525	GCA_002027985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/985/GCA_002027985.1_ASM202798v1	-	MQ140031
Mycobacterium tuberculosis H2760	1448814	PRJNA235826	235826	Terrabacteria group	Actinobacteria	4.43541	65.6	-	JKIM01	68	4331	4112	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599160	GCA_000665445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/445/GCA_000665445.1_Myco_tube_H2760_V1	-	H2760
Escherichia coli HVH 134 (4-6073441)	1281067	PRJNA186157	186157	Proteobacteria	Gammaproteobacteria	5.29662	50.7	-	AVWT01	5	5486	5165	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885779	GCA_000457955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/955/GCA_000457955.1_Esch_coli_HVH_134_4-6073441_V1	-	HVH 134 (4-6073441)
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.03417	39.6	-	CKAQ01	54	2218	2018	3/21/15	3/11/17	Contig	SC	SAMEA974659	GCA_001124865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/865/GCA_001124865.1_6259_6_3	-	7F
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.98896	65.9	-	LLOP01	120	6745	6484	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128576	GCA_001451075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/075/GCA_001451075.1_WH-SGI-V-07391	26604259	WH-SGI-V-07391
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.16362	39	-	JWXS03	204	4096	3941	12/29/14	3/18/17	Contig	JCVI	SAMN03084754	GCA_000809665.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/665/GCA_000809665.3_ASM80966v3	-	UH280_92
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.04711	41.1	-	FILV01	26	2065	1951	2/10/16	3/19/17	Scaffold	SC	SAMEA1316673	GCA_900050845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/845/GCA_900050845.1_7054_7_69	-	SS987
Streptococcus agalactiae STIR-CD-09	1154846	PRJNA86351	86351	Terrabacteria group	Firmicutes	1.80663	35.2	-	ALRM01	46	1833	1709	8/15/12	11/19/13	Contig	The J. Craig Venter Institute	SAMN00993724	GCA_000289115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/115/GCA_000289115.1_ASM28911v1	-	STIR-CD-09
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.76473	50.5	-	FTZN01	417	5407	4525	1/28/17	2/26/17	Scaffold	SC	SAMEA1569773	GCA_900159425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/425/GCA_900159425.1_8489_1_67	-	sh1355
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.59302	28.5	-	FUQT01	47	4360	4150	2/14/17	2/23/17	Scaffold	SC	SAMEA3374984	GCA_900165485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/485/GCA_900165485.1_16852_2_12	-	VRECD0023
Klebsiella pneumoniae	573	PRJEB7661	288866	Proteobacteria	Gammaproteobacteria	5.72874	57.1	-	CDFR01	415	5907	5534	7/2/15	2/21/17	Contig	UNIMI	SAMEA3108419	GCA_001182425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/425/GCA_001182425.1_KpVA-3	-	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.47604	63.9	-	FVMM01	15	5678	5433	3/10/17	3/18/17	Scaffold	SC	SAMEA2275721	GCA_900136125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/125/GCA_900136125.1_12163_1_69	-	995
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.37863	64.1	-	FSII01	34	5461	5279	12/14/16	3/21/17	Scaffold	SC	SAMEA2275723	GCA_900136135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/135/GCA_900136135.1_12163_1_71	-	997
Klebsiella pneumoniae	573	PRJEB7661	288866	Proteobacteria	Gammaproteobacteria	5.63708	57.1	-	CDFQ01	304	5762	5452	7/2/15	2/21/17	Contig	UNIMI	SAMEA3108420	GCA_001182445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/445/GCA_001182445.1_KpVA-4	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.42154	29.2	-	FUQU01	32	4225	4012	2/14/17	2/23/17	Scaffold	SC	SAMEA3374987	GCA_900165495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/495/GCA_900165495.1_16852_2_15	-	VRECD0026
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.70371	50.7	-	FTZL01	408	5326	4472	1/28/17	2/26/17	Scaffold	SC	SAMEA1569757	GCA_900159435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/435/GCA_900159435.1_8489_1_66	-	sh1354
Streptococcus agalactiae STIR-CD-13	1154847	PRJNA86353	86353	Terrabacteria group	Firmicutes	1.88085	35.5	-	ALRN01	77	1895	1754	8/15/12	11/19/13	Contig	The J. Craig Venter Institute	SAMN00993720	GCA_000289135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/135/GCA_000289135.1_ASM28913v1	-	STIR-CD-13
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.03092	41.2	-	FIKR01	22	2030	1923	2/10/16	3/19/17	Scaffold	SC	SAMEA1316559	GCA_900051265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/265/GCA_900051265.1_7054_7_50	-	SS1055
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.19538	39	-	JWVK03	161	4116	3969	12/29/14	3/18/17	Contig	JCVI	SAMN03084819	GCA_000809685.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/685/GCA_000809685.3_ASM80968v3	-	UH532_392
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.84797	66.1	-	LLOT01	74	6560	6357	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128580	GCA_001451125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/125/GCA_001451125.1_WH-SGI-V-07406	26604259	WH-SGI-V-07406
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10471	39.6	-	CMEJ01	85	2322	2096	3/21/15	3/11/17	Contig	SC	SAMEA1029119	GCA_001124905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/905/GCA_001124905.1_7011_4_9	-	SMRU2769
Escherichia coli HVH 135 (4-4449320)	1281068	PRJNA186159	186159	Proteobacteria	Gammaproteobacteria	5.23014	50.7	-	AVWU01	9	5408	5118	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885780	GCA_000457975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/975/GCA_000457975.1_Esch_coli_HVH_135_4-4449320_V1	-	HVH 135 (4-4449320)
Mycobacterium tuberculosis H3004	1448815	PRJNA235827	235827	Terrabacteria group	Actinobacteria	4.4053	65.6	-	JKIL01	80	4303	4088	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599161	GCA_000665465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/465/GCA_000665465.1_Myco_tube_H3004_V1	-	H3004
Listeria monocytogenes	1639	PRJNA371539	371539	Terrabacteria group	Firmicutes	2.88821	37.8	-	MVEO01	7	2930	2846	3/15/17	3/17/17	Contig	University College Cork	SAMN06309526	GCA_002028005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/005/GCA_002028005.1_ASM202800v1	-	MQ140032
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.60977	30.4	-	CUJX01	18	1674	1568	3/31/15	3/18/17	Scaffold	SC	SAMEA1010629	GCA_001233765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/765/GCA_001233765.1_7038_3_64	-	OXC6314
Salmonella enterica subsp. enterica serovar Bovismorbificans str. Sal680	1430432	PRJNA230004	230004	Proteobacteria	Gammaproteobacteria	4.59626	52.2	-	AZKU01	188	4631	4346	12/19/13	2/26/17	Contig	"OARSA, CFSAN"	SAMN02422696	GCA_000524825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/825/GCA_000524825.1_sal680	-	Sal680
Staphylococcus aureus M0791	1388582	PRJNA216755	216755	Terrabacteria group	Firmicutes	2.91067	32.9	-	JCOV01	63	3092	2912	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325706	GCA_000543745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/745/GCA_000543745.1_Stap_aure_M0791_V1	-	M0791
Staphylococcus aureus M0793	1388583	PRJNA216756	216756	Terrabacteria group	Firmicutes	2.88674	32.8	-	JCOW01	40	3042	2872	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325707	GCA_000543765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/765/GCA_000543765.1_Stap_aure_M0793_V1	-	M0793
Salmonella enterica subsp. enterica serovar Bovismorbificans str. Sal610	1430436	PRJNA230004	230004	Proteobacteria	Gammaproteobacteria	4.85609	52.1	-	AZKX01	106	4956	4717	12/19/13	2/26/17	Contig	"OARSA, CFSAN"	SAMN02422700	GCA_000524845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/845/GCA_000524845.1_sal610	-	Sal610
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.61936	30.4	-	CUHS01	14	1686	1565	3/31/15	3/18/17	Scaffold	SC	SAMEA1010402	GCA_001234505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/505/GCA_001234505.1_7038_3_12	-	OXC6261
Listeria monocytogenes	1639	PRJNA371539	371539	Terrabacteria group	Firmicutes	2.91186	37.9	-	MVEP01	8	2973	2879	3/15/17	3/17/17	Contig	University College Cork	SAMN06309527	GCA_002028025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/025/GCA_002028025.1_ASM202802v1	-	MQ140033
Mycobacterium tuberculosis H3005	1448816	PRJNA235828	235828	Terrabacteria group	Actinobacteria	4.4254	65.6	-	JKIK01	68	4323	4108	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599162	GCA_000665485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/485/GCA_000665485.1_Myco_tube_H3005_V1	-	H3005
Escherichia coli HVH 137 (4-2124971)	1281070	PRJNA186163	186163	Proteobacteria	Gammaproteobacteria	5.21731	50.6	-	AVWW01	8	5432	5099	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885782	GCA_000457995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/457/995/GCA_000457995.1_Esch_coli_HVH_137_4-2124971_V1	-	HVH 137 (4-2124971)
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.04901	39.7	-	CLZY01	69	2245	2045	3/21/15	3/11/17	Contig	SC	SAMEA1029143	GCA_001124965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/965/GCA_001124965.1_7004_5_11	-	SMRU2867
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.72281	66.1	-	LLOU01	96	6425	6233	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128581	GCA_001451145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/145/GCA_001451145.1_WH-SGI-V-07407	26604259	WH-SGI-V-07407
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.14593	39	-	JWVJ03	174	4057	3914	12/29/14	3/18/17	Contig	JCVI	SAMN03084820	GCA_000809705.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/705/GCA_000809705.3_ASM80970v3	-	UH129_404
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.06569	41.4	-	FIKS01	33	2008	1897	2/10/16	3/19/17	Scaffold	SC	SAMEA1316523	GCA_900051945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/945/GCA_900051945.1_7054_7_51	-	SS1056
Streptococcus agalactiae LMG 14609	1154859	PRJNA86377	86377	Terrabacteria group	Firmicutes	2.20423	35.3	-	ALRV01	119	2279	2155	8/15/12	11/19/13	Contig	The J. Craig Venter Institute	SAMN01091760	GCA_000289295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/289/295/GCA_000289295.1_ASM28929v1	-	LMG 14609
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.79699	50.5	-	FTZM01	425	5435	4577	1/28/17	2/26/17	Scaffold	SC	SAMEA1569911	GCA_900159445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/445/GCA_900159445.1_8489_1_65	-	sh1353
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.14027	28.5	-	FUQV01	26	3862	3709	2/14/17	2/23/17	Scaffold	SC	SAMEA3374992	GCA_900165505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/505/GCA_900165505.1_16852_2_20	-	VRECD0024
Klebsiella pneumoniae	573	PRJEB7661	288866	Proteobacteria	Gammaproteobacteria	5.73969	57.1	-	CDFO01	208	5941	5613	7/2/15	2/21/17	Contig	UNIMI	SAMEA3108421	GCA_001182465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/465/GCA_001182465.1_KpVA-5	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.2288	64	-	FSIK01	23	5272	5140	12/14/16	3/21/17	Scaffold	SC	SAMEA2275724	GCA_900136145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/145/GCA_900136145.1_12163_1_72	-	998
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.17692	64.1	-	FSIH01	12	5218	5099	12/14/16	3/21/17	Scaffold	SC	SAMEA2275719	GCA_900136155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/155/GCA_900136155.1_12163_1_67	-	993
Klebsiella pneumoniae	573	PRJEB7661	288866	Proteobacteria	Gammaproteobacteria	5.74235	57.1	-	CDGA01	200	5939	5614	7/2/15	2/21/17	Contig	UNIMI	SAMEA3108422	GCA_001182485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/485/GCA_001182485.1_KpVA-6	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.14964	28.5	-	FUQW01	27	3901	3710	2/14/17	2/23/17	Scaffold	SC	SAMEA3374990	GCA_900165515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/515/GCA_900165515.1_16852_2_18	-	VRECD0017
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.72668	50.5	-	FTZP01	407	5326	4476	1/28/17	2/26/17	Scaffold	SC	SAMEA1569779	GCA_900159455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/455/GCA_900159455.1_8489_1_68	-	sh1356
Streptococcus agalactiae STIR-CD-17	1097670	PRJNA74531	74531	Terrabacteria group	Firmicutes	1.8053	35.3	-	ALXB01	96	1719	1698	9/10/12	1/8/14	Contig	Moredun	SAMN02470563	GCA_000295815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/295/815/GCA_000295815.1_ASM29581v1	23105075	STIR-CD-17
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.13797	41.3	-	FIMB01	30	2115	1981	2/10/16	3/19/17	Scaffold	SC	SAMEA1316584	GCA_900053165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/165/GCA_900053165.1_7054_7_77	-	SS997
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.16951	39	-	JWVI03	175	4088	3938	12/29/14	3/18/17	Contig	JCVI	SAMN03084821	GCA_000809725.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/725/GCA_000809725.3_ASM80972v3	-	UH129_408
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.59612	66.2	-	LLOY01	100	6317	6109	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128585	GCA_001451165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/165/GCA_001451165.1_WH-SGI-V-07411	26604259	WH-SGI-V-07411
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.17451	39.5	-	CKOR01	55	2410	2160	3/21/15	3/4/17	Contig	SC	SAMEA1024859	GCA_001125105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/105/GCA_001125105.1_6680_4_10	-	19B
Escherichia coli HVH 138 (4-6066704)	1281071	PRJNA186165	186165	Proteobacteria	Gammaproteobacteria	5.22404	50.5	-	AVWX01	11	5323	4998	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885783	GCA_000458015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/015/GCA_000458015.1_Esch_coli_HVH_138_4-6066704_V1	-	HVH 138 (4-6066704)
Mycobacterium tuberculosis H3033	1448817	PRJNA235829	235829	Terrabacteria group	Actinobacteria	4.42611	65.6	-	JKIJ01	81	4329	4105	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599163	GCA_000665505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/505/GCA_000665505.1_Myco_tube_H3033_V1	-	H3033
Listeria monocytogenes	1639	PRJNA371539	371539	Terrabacteria group	Firmicutes	2.96239	37.9	-	MVEG01	7	3042	2945	3/15/17	3/17/17	Contig	University College Cork	SAMN06309518	GCA_002028035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/035/GCA_002028035.1_ASM202803v1	-	MQ130042
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70867	30.3	-	CUJZ01	10	1802	1677	3/31/15	3/18/17	Scaffold	SC	SAMEA1010585	GCA_001234565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/565/GCA_001234565.1_7038_3_66	-	OXC6316
Salmonella enterica subsp. enterica serovar Bovismorbificans str. Sal615	1430437	PRJNA230004	230004	Proteobacteria	Gammaproteobacteria	4.84548	52.2	-	AZKY01	119	5001	4713	12/19/13	2/26/17	Contig	"OARSA, CFSAN"	SAMN02422701	GCA_000524865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/865/GCA_000524865.1_sal615	-	Sal615
Staphylococcus aureus M0794	1388584	PRJNA216757	216757	Terrabacteria group	Firmicutes	2.85519	32.8	-	JCOX01	44	3011	2835	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325708	GCA_000543785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/785/GCA_000543785.1_Stap_aure_M0794_V1	-	M0794
Staphylococcus aureus M0796	1388585	PRJNA216758	216758	Terrabacteria group	Firmicutes	2.95153	32.8	-	JCOY01	55	3131	2959	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325709	GCA_000543805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/805/GCA_000543805.1_Stap_aure_M0796_V1	-	M0796
Salmonella enterica subsp. enterica serovar Bovismorbificans str. Sal609	1430435	PRJNA230004	230004	Proteobacteria	Gammaproteobacteria	4.8954	52.2	-	AZKW01	257	4992	4732	12/19/13	2/26/17	Contig	"OARSA, CFSAN"	SAMN02422699	GCA_000524885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/885/GCA_000524885.1_sal609	-	Sal609
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.66549	30.4	-	CUNQ01	15	1753	1639	3/31/15	3/18/17	Scaffold	SC	SAMEA1010572	GCA_001234685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/685/GCA_001234685.1_7065_7_65	-	OXC6413
Listeria monocytogenes	1639	PRJNA371539	371539	Terrabacteria group	Firmicutes	3.04998	37.8	-	MVER01	11	3136	3054	3/15/17	3/17/17	Contig	University College Cork	SAMN06309529	GCA_002028065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/065/GCA_002028065.1_ASM202806v1	-	MQ140035
Mycobacterium tuberculosis H3360	1448818	PRJNA235830	235830	Terrabacteria group	Actinobacteria	4.39015	65.6	-	JKII01	83	4332	4116	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599164	GCA_000665525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/525/GCA_000665525.1_Myco_tube_H3360_V1	-	H3360
Escherichia coli HVH 139 (4-3192644)	1281072	PRJNA186168	186168	Proteobacteria	Gammaproteobacteria	5.18069	50.5	-	AVWY01	47	5229	4933	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885784	GCA_000458035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/035/GCA_000458035.1_Esch_coli_HVH_139_4-3192644_V1	-	HVH 139 (4-3192644)
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.01276	39.7	-	CMAD01	50	2214	2023	3/21/15	3/4/17	Contig	SC	SAMEA1028695	GCA_001125145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/145/GCA_001125145.1_7004_5_16	-	SMRU2872
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.30199	66.5	-	LLPA01	67	5944	5764	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128587	GCA_001451175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/175/GCA_001451175.1_WH-SGI-V-07413	26604259	WH-SGI-V-07413
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.15829	39	-	JWVH03	116	4066	3923	12/29/14	3/18/17	Contig	JCVI	SAMN03084822	GCA_000809745.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/745/GCA_000809745.3_ASM80974v3	-	UH129_409
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04805	41.2	-	FIND01	22	2061	1951	2/10/16	4/2/17	Scaffold	SC	SAMEA1566155	GCA_900054125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/125/GCA_900054125.1_8337_6_27	-	BM334B
Streptococcus agalactiae STIR-CD-07	1154845	PRJNA86349	86349	Terrabacteria group	Firmicutes	1.79555	35.2	-	ANEI01	63	1834	1710	11/7/12	11/19/13	Contig	The J. Craig Venter Institute	SAMN00993457	GCA_000311285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/311/285/GCA_000311285.1_ASM31128v1	-	STIR-CD-07
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.87905	50.6	-	FTZQ01	409	5504	4684	1/28/17	2/26/17	Scaffold	SC	SAMEA1569804	GCA_900159475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/475/GCA_900159475.1_8489_1_71	-	sh1359
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.08487	28.3	-	FUQX01	27	3785	3589	2/14/17	2/23/17	Scaffold	SC	SAMEA3374993	GCA_900165525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/525/GCA_900165525.1_16852_2_21	-	VRECD0034
Klebsiella pneumoniae	573	PRJEB7661	288866	Proteobacteria	Gammaproteobacteria	5.73163	57.1	-	CDGB01	181	5932	5611	7/2/15	2/21/17	Contig	UNIMI	SAMEA3108423	GCA_001182505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/505/GCA_001182505.1_KpVA-7	-	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98342	64	-	FVMN01	27	5031	4864	3/10/17	3/18/17	Scaffold	SC	SAMEA2275725	GCA_900136175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/175/GCA_900136175.1_12163_1_73	-	999
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.17756	64.1	-	FSIG01	14	5221	5103	12/14/16	3/21/17	Scaffold	SC	SAMEA2275717	GCA_900136185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/185/GCA_900136185.1_12163_1_65	-	991
Klebsiella pneumoniae	573	PRJEB7661	288866	Proteobacteria	Gammaproteobacteria	5.73634	57.1	-	CDGC01	169	5920	5614	7/2/15	2/21/17	Contig	UNIMI	SAMEA3108424	GCA_001182525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/525/GCA_001182525.1_KpVA-8	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.51338	28.4	-	FUQY01	32	4313	4115	2/14/17	2/23/17	Scaffold	SC	SAMEA3374994	GCA_900165535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/535/GCA_900165535.1_16852_2_22	-	VRECD0028
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.5969	50.9	-	FTZR01	370	5166	4385	1/28/17	2/26/17	Scaffold	SC	SAMEA1569798	GCA_900159485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/485/GCA_900159485.1_8489_1_70	-	sh1358
Streptococcus agalactiae STIR-CD-29	1154857	PRJNA86373	86373	Terrabacteria group	Firmicutes	1.82869	35.4	-	ANQD01	19	-	-	12/17/12	12/5/13	Contig	The J. Craig Venter Institute	SAMN02436190	GCA_000322765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/765/GCA_000322765.1_ASM32276v1	-	STIR-CD-29
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.02421	41.2	-	FIFB01	23	2025	1920	2/10/16	3/19/17	Scaffold	SC	SAMEA1316568	GCA_900054285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/285/GCA_900054285.1_5749_1_1	-	LOLA-SS001
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.1472	39	-	JWVG03	126	4052	3905	12/29/14	3/18/17	Contig	JCVI	SAMN03084823	GCA_000809765.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/765/GCA_000809765.3_ASM80976v3	-	UH293_412
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.66889	65.9	-	LLPC01	119	6524	6291	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128589	GCA_001451225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/225/GCA_001451225.1_WH-SGI-V-07415	26604259	WH-SGI-V-07415
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05351	39.7	-	CLQK01	69	2255	2037	3/21/15	3/4/17	Contig	SC	SAMEA1028872	GCA_001125305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/305/GCA_001125305.1_6949_4_24	-	SMRU2496
Escherichia coli HVH 140 (4-5894387)	1281073	PRJNA186171	186171	Proteobacteria	Gammaproteobacteria	5.39452	50.8	-	AVWZ01	4	5584	5235	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885785	GCA_000458055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/055/GCA_000458055.1_Esch_coli_HVH_140_4-5894387_V1	-	HVH 140 (4-5894387)
Mycobacterium tuberculosis H3361	1448819	PRJNA235831	235831	Terrabacteria group	Actinobacteria	4.44087	65.6	-	JKIH01	69	4337	4122	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599165	GCA_000665545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/545/GCA_000665545.1_Myco_tube_H3361_V1	-	H3361
Listeria monocytogenes	1639	PRJNA371539	371539	Terrabacteria group	Firmicutes	3.04891	37.8	-	MVEQ01	10	3134	3055	3/15/17	3/17/17	Contig	University College Cork	SAMN06309528	GCA_002028085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/085/GCA_002028085.1_ASM202808v1	-	MQ140034
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.86435	30.5	-	CUUD01	100	2004	1751	3/31/15	4/21/17	Scaffold	SC	SAMEA1400999	GCA_001234965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/965/GCA_001234965.1_7213_3_46	-	OXC6589
Salmonella enterica subsp. enterica serovar Bovismorbificans str. Sal616	1430438	PRJNA230004	230004	Proteobacteria	Gammaproteobacteria	4.86278	52.2	-	AZKZ01	164	4993	4728	12/19/13	2/26/17	Contig	"OARSA, CFSAN"	SAMN02422702	GCA_000524905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/905/GCA_000524905.1_sal616	-	Sal616
Staphylococcus aureus M0798	1388586	PRJNA216759	216759	Terrabacteria group	Firmicutes	2.94876	32.8	-	JCOZ01	51	3124	2951	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325710	GCA_000543825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/825/GCA_000543825.1_Stap_aure_M0798_V1	-	M0798
Staphylococcus aureus M0800	1388587	PRJNA216760	216760	Terrabacteria group	Firmicutes	2.89805	32.7	-	JCPA01	83	3076	2940	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325711	GCA_000543845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/845/GCA_000543845.1_Stap_aure_M0800_V1	-	M0800
Salmonella enterica subsp. enterica serovar Bovismorbificans str. Sal617	1430439	PRJNA230004	230004	Proteobacteria	Gammaproteobacteria	4.86991	52.1	-	AZLA01	144	4981	4726	12/19/13	2/26/17	Contig	"OARSA, CFSAN"	SAMN02422703	GCA_000524925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/925/GCA_000524925.1_sal617	-	Sal617
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.73002	30.4	-	CUOZ01	20	1859	1758	3/31/15	3/18/17	Scaffold	SC	SAMEA1010515	GCA_001236225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/225/GCA_001236225.1_7092_1_10	-	OXC6457
Listeria monocytogenes	1639	PRJNA371539	371539	Terrabacteria group	Firmicutes	2.91648	37.9	-	MVES01	8	3002	2909	3/15/17	3/17/17	Contig	University College Cork	SAMN06309530	GCA_002028105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/105/GCA_002028105.1_ASM202810v1	-	MQ150001
Mycobacterium tuberculosis H2463	1448821	PRJNA235833	235833	Terrabacteria group	Actinobacteria	4.4091	65.6	-	JKIG01	75	4305	4095	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599167	GCA_000665565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/565/GCA_000665565.1_Myco_tube_H2463_V1	-	H2463
Escherichia coli HVH 141 (4-5995973)	1281074	PRJNA186173	186173	Proteobacteria	Gammaproteobacteria	5.20231	50.6	-	AVXA01	5	5320	5021	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885786	GCA_000458075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/075/GCA_000458075.1_Esch_coli_HVH_141_4-5995973_V1	-	HVH 141 (4-5995973)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04567	39.6	-	CNOH02	180	2217	2025	3/23/15	3/5/17	Contig	SC	SAMEA1032443	GCA_001125425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/425/GCA_001125425.2_6925_2_81	-	R34-3062
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.99718	66.1	-	LLOH01	86	6743	6554	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128568	GCA_001451245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/245/GCA_001451245.1_WH-SGI-V-07383	26604259	WH-SGI-V-07383
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.15596	39	-	JWVF03	122	4055	3922	12/29/14	3/18/17	Contig	JCVI	SAMN03084824	GCA_000809785.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/785/GCA_000809785.3_ASM80978v3	-	UH129_415
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.366	41.3	-	FIJK01	148	2388	2207	2/10/16	4/2/17	Scaffold	SC	SAMEA1316531	GCA_900054825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/825/GCA_900054825.1_7054_7_81	-	SS1013
Streptococcus agalactiae FSL S3-608	1154778	PRJNA86147	86147	Terrabacteria group	Firmicutes	2.4621	35.9	-	ANQA01	108	-	-	12/17/12	12/5/13	Contig	The J. Craig Venter Institute	SAMN02436189	GCA_000322785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/322/785/GCA_000322785.1_ASM32278v1	-	FSL S3-608
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.75811	50.5	-	FTZS01	430	5356	4533	1/28/17	2/26/17	Scaffold	SC	SAMEA1569839	GCA_900159495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/495/GCA_900159495.1_8489_1_74	-	sh1362
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.08067	28.3	-	FUQZ01	29	3734	3584	2/14/17	2/23/17	Scaffold	SC	SAMEA3374996	GCA_900165545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/545/GCA_900165545.1_16852_2_24	-	VRECD0032
Klebsiella pneumoniae	573	PRJEB7661	288866	Proteobacteria	Gammaproteobacteria	5.74214	57.1	-	CDGD01	366	5921	5589	7/2/15	2/21/17	Contig	UNIMI	SAMEA3108425	GCA_001182545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/545/GCA_001182545.1_KpVA-9	-	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.90037	64.2	-	FVML01	9	4919	4791	3/10/17	3/18/17	Scaffold	SC	SAMEA2275727	GCA_900136195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/195/GCA_900136195.1_12163_1_75	-	1001
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.9714	64.2	-	FVMJ01	40	4967	4810	3/10/17	3/18/17	Scaffold	SC	SAMEA2275728	GCA_900136215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/215/GCA_900136215.1_12163_1_76	-	1002
Klebsiella pneumoniae	573	PRJEB7661	288866	Proteobacteria	Gammaproteobacteria	5.74188	57.1	-	CDFT01	173	5936	5621	7/2/15	2/21/17	Contig	UNIMI	SAMEA3108426	GCA_001182565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/565/GCA_001182565.1_KpVA-10	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.23386	28.7	-	FURA01	40	4028	3860	2/14/17	2/23/17	Scaffold	SC	SAMEA3374997	GCA_900165555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/555/GCA_900165555.1_16852_2_25	-	VRECD0035
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.8336	50.5	-	FTZU01	420	5416	4594	1/28/17	2/26/17	Scaffold	SC	SAMEA1569825	GCA_900159505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/505/GCA_900159505.1_8489_1_73	-	sh1361
Streptococcus agalactiae LADL-90-503	1266066	PRJEB1142	191873	Terrabacteria group	Firmicutes	1.80425	35.3	-	CAPZ01	82	1769	1578	3/3/13	1/30/15	Contig	IP	SAMEA2272027	GCA_000344905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/344/905/GCA_000344905.1_ASM34490v1	23586779	LADL-90-503
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.15091	40.9	-	FIJL01	64	2187	2035	2/10/16	3/19/17	Scaffold	SC	SAMEA1316520	GCA_900055115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/115/GCA_900055115.1_7054_7_82	-	SS1014
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.82653	39	-	JWVE03	107	3684	3556	12/29/14	3/18/17	Contig	JCVI	SAMN03084825	GCA_000809805.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/805/GCA_000809805.3_ASM80980v3	-	UH535_418
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.91943	66	-	LLOM01	147	6731	6487	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128573	GCA_001451255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/255/GCA_001451255.1_WH-SGI-V-07388	26604259	WH-SGI-V-07388
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.03923	39.7	-	CNQN02	116	2209	2013	3/22/15	3/11/17	Contig	SC	SAMEA1032487	GCA_001125525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/525/GCA_001125525.2_6952_7_4	-	R34-3165
Escherichia coli HVH 142 (4-5627451)	1281075	PRJNA186174	186174	Proteobacteria	Gammaproteobacteria	5.25817	50.5	-	AVXB01	24	5391	5065	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885787	GCA_000458095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/095/GCA_000458095.1_Esch_coli_HVH_142_4-5627451_V1	-	HVH 142 (4-5627451)
Mycobacterium tuberculosis H2754	1448822	PRJNA235834	235834	Terrabacteria group	Actinobacteria	4.41764	65.6	-	JKIF01	76	4307	4088	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599168	GCA_000665585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/585/GCA_000665585.1_Myco_tube_H2754_V1	-	H2754
Listeria monocytogenes	1639	PRJNA371539	371539	Terrabacteria group	Firmicutes	2.93289	37.8	-	MVET01	12	2983	2902	3/15/17	3/17/17	Contig	University College Cork	SAMN06309531	GCA_002028125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/125/GCA_002028125.1_ASM202812v1	-	MQ150004
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.83456	30	-	CUOL01	39	1983	1824	3/31/15	3/18/17	Scaffold	SC	SAMEA1010546	GCA_001236525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/525/GCA_001236525.1_7065_7_85	-	OXC6433
Salmonella enterica subsp. enterica serovar Bovismorbificans str. Sal681	1430433	PRJNA230004	230004	Proteobacteria	Gammaproteobacteria	4.57403	52.2	-	AZLB01	116	4619	4333	12/19/13	2/26/17	Contig	"OARSA, CFSAN"	SAMN02422697	GCA_000524945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/945/GCA_000524945.1_sal681	-	Sal681
Staphylococcus aureus M0801	1388588	PRJNA216761	216761	Terrabacteria group	Firmicutes	2.90568	32.7	-	JCPB01	66	3077	2935	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325712	GCA_000543865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/865/GCA_000543865.1_Stap_aure_M0801_V1	-	M0801
Staphylococcus aureus M0802	1388589	PRJNA216762	216762	Terrabacteria group	Firmicutes	2.92215	32.9	-	JCPC01	77	3129	2939	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325713	GCA_000543885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/885/GCA_000543885.1_Stap_aure_M0802_V1	-	M0802
Salmonella enterica subsp. enterica serovar Bovismorbificans str. Sal682	1432048	PRJNA230004	230004	Proteobacteria	Gammaproteobacteria	4.84332	52.2	-	AZKQ02	84	4968	4713	12/19/13	2/26/17	Contig	"OARSA, CFSAN"	SAMN02422690	GCA_000524965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/965/GCA_000524965.2_sal682v2	-	Sal682
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.75872	30.2	-	CUVR01	40	1856	1708	3/31/15	3/18/17	Scaffold	SC	SAMEA1401433	GCA_001236725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/725/GCA_001236725.1_7213_3_86	-	OXC6631
Listeria monocytogenes	1639	PRJNA371539	371539	Terrabacteria group	Firmicutes	2.96375	37.8	-	MVEU01	10	3048	2961	3/15/17	3/17/17	Contig	University College Cork	SAMN06309532	GCA_002028145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/145/GCA_002028145.1_ASM202814v1	-	MQ150005
Mycobacterium tuberculosis H3094	1448823	PRJNA235835	235835	Terrabacteria group	Actinobacteria	4.42859	65.6	-	JKIE01	79	4325	4117	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599169	GCA_000665605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/605/GCA_000665605.1_Myco_tube_H3094_V1	-	H3094
Escherichia coli HVH 143 (4-5674999)	1281076	PRJNA186175	186175	Proteobacteria	Gammaproteobacteria	5.20325	50.5	-	AVXC01	10	5287	4949	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885788	GCA_000458115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/115/GCA_000458115.1_Esch_coli_HVH_143_4-5674999_V1	-	HVH 143 (4-5674999)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00616	39.7	-	CNSZ02	102	2157	1967	3/23/15	3/11/17	Contig	SC	SAMEA1032515	GCA_001125545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/545/GCA_001125545.2_6999_3_5	-	7649
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.69459	66.1	-	LLOR01	142	6479	6247	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128578	GCA_001451265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/265/GCA_001451265.1_WH-SGI-V-07404	26604259	WH-SGI-V-07404
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.81232	39	-	JWVD03	139	3676	3551	12/29/14	3/18/17	Contig	JCVI	SAMN03084826	GCA_000809825.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/825/GCA_000809825.3_ASM80982v3	-	UH535_419
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.24466	41.4	-	FILX01	100	2209	2042	2/10/16	3/19/17	Scaffold	SC	SAMEA1316646	GCA_900055865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/865/GCA_900055865.1_7054_7_73	-	SS993
Streptococcus agalactiae SS1219	1265684	PRJEB1141	191876	Terrabacteria group	Firmicutes	1.80167	35.3	-	CAQA01	70	1692	1505	3/10/13	1/30/15	Contig	IP	SAMEA2272287	GCA_000347375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/375/GCA_000347375.1_ASM34737v1	23586779	SS1219
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.81676	50.5	-	FTZT01	408	5458	4593	1/28/17	2/26/17	Scaffold	SC	SAMEA1569843	GCA_900159515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/515/GCA_900159515.1_8489_1_75	-	sh1363
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.29793	28.7	-	FURB01	30	4031	3876	2/14/17	2/23/17	Scaffold	SC	SAMEA3374998	GCA_900165565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/565/GCA_900165565.1_16852_2_26	-	VRECD0027
Klebsiella pneumoniae	573	PRJEB7661	288866	Proteobacteria	Gammaproteobacteria	5.73459	57.1	-	CDFU01	179	5918	5609	7/2/15	2/21/17	Contig	UNIMI	SAMEA3108427	GCA_001182585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/585/GCA_001182585.1_KpVA-11	-	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.9379	64.1	-	FVMK01	25	4997	4861	3/10/17	3/18/17	Scaffold	SC	SAMEA2275733	GCA_900136225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/225/GCA_900136225.1_12163_1_78	-	1007
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.17628	64.1	-	FSIL01	17	5226	5096	12/14/16	3/21/17	Scaffold	SC	SAMEA2275735	GCA_900136245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/245/GCA_900136245.1_12163_1_80	-	1009
Klebsiella pneumoniae	573	PRJEB7661	288866	Proteobacteria	Gammaproteobacteria	5.53979	57.3	-	CDFV01	150	5698	5417	7/2/15	2/21/17	Contig	UNIMI	SAMEA3108428	GCA_001182605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/605/GCA_001182605.1_KpVA-12	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.14457	28.5	-	FURC01	29	3895	3728	2/14/17	2/23/17	Scaffold	SC	SAMEA3375000	GCA_900165575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/575/GCA_900165575.1_16852_2_28	-	VRECD0018
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.91557	50.3	-	FTZV01	495	5547	4667	1/28/17	2/26/17	Scaffold	SC	SAMEA1569817	GCA_900159525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/525/GCA_900159525.1_8489_1_76	-	sh1364
Streptococcus agalactiae LADL_05-108a	1266067	PRJEB1143	191874	Terrabacteria group	Firmicutes	1.80009	35.3	-	CATH01	87	-	-	3/10/13	1/30/15	Contig	IP	SAMEA2272359	GCA_000347395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/347/395/GCA_000347395.1_ASM34739v1	23586779	LADL_05-108a
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.16835	41	-	FILS01	69	2202	2059	2/10/16	3/19/17	Scaffold	SC	SAMEA1316685	GCA_900056565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/565/GCA_900056565.1_7054_7_68	-	SS986
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.95314	38.9	-	JWVC03	186	3797	3615	12/29/14	3/18/17	Contig	JCVI	SAMN03084827	GCA_000809845.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/845/GCA_000809845.3_ASM80984v3	-	UH535_423
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.69085	66.1	-	LLOV01	111	6375	6187	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128582	GCA_001451295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/295/GCA_001451295.1_WH-SGI-V-07408	26604259	WH-SGI-V-07408
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11001	39.5	-	CLHO01	42	2335	2109	3/21/15	3/11/17	Contig	SC	SAMEA1025953	GCA_001125665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/665/GCA_001125665.1_6925_5_5	-	SMRU2165
Escherichia coli HVH 144 (4-4451937)	1281077	PRJNA186176	186176	Proteobacteria	Gammaproteobacteria	5.30126	50.3	-	AVXD01	12	5411	5011	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885789	GCA_000458135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/135/GCA_000458135.1_Esch_coli_HVH_144_4-4451937_V1	-	HVH 144 (4-4451937)
Mycobacterium tuberculosis H3986	1448824	PRJNA235836	235836	Terrabacteria group	Actinobacteria	4.42885	65.6	-	JKID01	71	4323	4110	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599170	GCA_000665625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/625/GCA_000665625.1_Myco_tube_H3986_V1	-	H3986
Listeria monocytogenes	1639	PRJNA371539	371539	Terrabacteria group	Firmicutes	2.96357	37.9	-	MVEV01	8	3047	2963	3/15/17	3/17/17	Contig	University College Cork	SAMN06309533	GCA_002028165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/165/GCA_002028165.1_ASM202816v1	-	MQ150007
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.71669	30.2	-	CUVW01	23	1789	1637	3/31/15	3/18/17	Scaffold	SC	SAMEA1401564	GCA_001237125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/125/GCA_001237125.1_7213_3_90	-	OXC6635
Salmonella enterica subsp. enterica serovar Heidelberg str. N1536	1054959	PRJNA69869	69869	Proteobacteria	Gammaproteobacteria	4.84687	52.2	-	AKYN01	128	5005	4697	3/26/14	2/26/17	Contig	FDA	SAMN01041041	GCA_000601395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/395/GCA_000601395.1_SEEH1536_1.0	24732280	N1536
Staphylococcus aureus M0804	1388590	PRJNA216763	216763	Terrabacteria group	Firmicutes	2.94261	32.9	-	JCPD01	33	3090	2920	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325714	GCA_000543905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/905/GCA_000543905.1_Stap_aure_M0804_V1	-	M0804
Staphylococcus aureus M0806	1388592	PRJNA216765	216765	Terrabacteria group	Firmicutes	2.86074	32.8	-	JCPE01	47	3028	2860	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325716	GCA_000543925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/925/GCA_000543925.1_Stap_aure_M0806_V1	-	M0806
Salmonella enterica subsp. enterica serovar Heidelberg str. 29169	1128966	PRJNA80527	80527	Proteobacteria	Gammaproteobacteria	4.74881	52.2	-	APIX01	160	4910	4560	3/26/14	2/26/17	Contig	FDA	SAMN01816205	GCA_000601415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/415/GCA_000601415.1_CFSAN000309_01.0	24732280	29169
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.76205	30.2	-	CUPA01	26	1865	1724	3/31/15	3/18/17	Scaffold	SC	SAMEA1010320	GCA_001237345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/345/GCA_001237345.1_7092_1_11	-	OXC6458
Listeria monocytogenes	1639	PRJNA371539	371539	Terrabacteria group	Firmicutes	3.01342	37.8	-	MVEW01	8	3098	3006	3/15/17	3/17/17	Contig	University College Cork	SAMN06309534	GCA_002028185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/185/GCA_002028185.1_ASM202818v1	-	MQ150008
Mycobacterium tuberculosis H1249	1448825	PRJNA235837	235837	Terrabacteria group	Actinobacteria	4.42959	65.6	-	JKIC01	64	4338	4116	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599171	GCA_000665645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/645/GCA_000665645.1_Myco_tube_H1249_V1	-	H1249
Escherichia coli HVH 145 (4-5672112)	1281078	PRJNA186177	186177	Proteobacteria	Gammaproteobacteria	5.3738	50.7	-	AVXE01	4	5630	5308	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885790	GCA_000458155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/155/GCA_000458155.1_Esch_coli_HVH_145_4-5672112_V1	-	HVH 145 (4-5672112)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.16668	39.6	-	COCR02	228	2380	2149	3/23/15	3/11/17	Contig	SC	SAMEA1463178	GCA_001125765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/765/GCA_001125765.2_7622_3_79	-	GL3015
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.37021	66.3	-	LLOX01	68	6066	5906	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128584	GCA_001451325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/325/GCA_001451325.1_WH-SGI-V-07410	26604259	WH-SGI-V-07410
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.90012	39	-	JWVB03	235	3756	3566	12/29/14	3/18/17	Contig	JCVI	SAMN03084828	GCA_000809865.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/865/GCA_000809865.3_ASM80986v3	-	UH106_429
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04057	41.1	-	FITD01	20	2054	1926	2/10/16	3/19/17	Scaffold	SC	SAMEA1566118	GCA_900056625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/625/GCA_900056625.1_8525_5_10	-	FX431
Streptococcus agalactiae SS1218	1266068	PRJEB1144	191878	Terrabacteria group	Firmicutes	1.79676	35.3	-	CAUB01	70	-	-	4/8/13	1/30/15	Contig	IP	SAMEA2272566	GCA_000367385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/385/GCA_000367385.1_ASM36738v1	23586779	SS1218
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.73324	50.5	-	FTZW01	414	5342	4484	1/28/17	2/26/17	Scaffold	SC	SAMEA1569784	GCA_900159535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/535/GCA_900159535.1_8489_1_77	-	sh1365
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.16199	28.5	-	FURD01	27	3965	3795	2/14/17	2/23/17	Scaffold	SC	SAMEA3375001	GCA_900165585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/585/GCA_900165585.1_16852_2_29	-	VRECD0025
Klebsiella pneumoniae	573	PRJEB7661	288866	Proteobacteria	Gammaproteobacteria	5.74	57.1	-	CDFY01	165	5924	5606	7/2/15	2/21/17	Contig	UNIMI	SAMEA3108429	GCA_001182625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/625/GCA_001182625.1_KpVA-13	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.37985	64.1	-	FSIN01	36	5459	5276	12/14/16	3/21/17	Scaffold	SC	SAMEA2275736	GCA_900136255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/255/GCA_900136255.1_12163_1_81	-	1010
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.91305	64.3	-	FSIO01	16	4885	4712	12/14/16	3/21/17	Scaffold	SC	SAMEA2275737	GCA_900136265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/265/GCA_900136265.1_12163_1_82	-	1011
Klebsiella pneumoniae	573	PRJEB7661	288866	Proteobacteria	Gammaproteobacteria	5.7492	57.1	-	CDFW01	211	5947	5617	7/2/15	2/21/17	Contig	UNIMI	SAMEA3108430	GCA_001182645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/645/GCA_001182645.1_KpVA-14	-	-
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.51298	28.4	-	FURE01	35	4308	4115	2/14/17	2/23/17	Scaffold	SC	SAMEA3375002	GCA_900165595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/595/GCA_900165595.1_16852_2_30	-	VRECD0029
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.73712	50.5	-	FTZX01	403	5347	4481	1/28/17	2/26/17	Scaffold	SC	SAMEA1569793	GCA_900159545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/545/GCA_900159545.1_8489_1_78	-	sh1366
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	2.07117	35.5	-	LCZW01	32	2091	1965	6/1/15	6/1/15	Contig	Novartis Vaccines	SAMN03435102	GCA_001016125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/016/125/GCA_001016125.1_ASM101612v1	25946017	ML30419
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.31851	41.5	-	FIGU01	99	2280	2115	2/10/16	3/19/17	Scaffold	SC	SAMEA1316537	GCA_900056835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/835/GCA_900056835.1_7114_5_38	-	LSS38
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.05539	38.9	-	JWVA03	107	3939	3802	12/29/14	3/18/17	Contig	JCVI	SAMN03084829	GCA_000809885.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/885/GCA_000809885.3_ASM80988v3	-	UH225_433
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.93272	66	-	LLOW01	144	6720	6485	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128583	GCA_001451335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/335/GCA_001451335.1_WH-SGI-V-07409	26604259	WH-SGI-V-07409
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09442	39.6	-	CMQX01	38	2304	2061	3/23/15	3/11/17	Contig	SC	SAMEA2062158	GCA_001125825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/825/GCA_001125825.1_9803_8_24	-	14
Escherichia coli HVH 146 (4-3189767)	1281079	PRJNA186178	186178	Proteobacteria	Gammaproteobacteria	5.40238	50.5	-	AVXF01	7	5550	5214	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885791	GCA_000458175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/175/GCA_000458175.1_Esch_coli_HVH_146_4-3189767_V1	-	HVH 146 (4-3189767)
Mycobacterium tuberculosis H1996	1448826	PRJNA235838	235838	Terrabacteria group	Actinobacteria	4.42115	65.6	-	JKIB01	74	4325	4108	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599172	GCA_000665665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/665/GCA_000665665.1_Myco_tube_H1996_V1	-	H1996
Listeria monocytogenes	1639	PRJNA371539	371539	Terrabacteria group	Firmicutes	2.95688	37.8	-	MVEZ01	14	3016	2918	3/15/17	3/17/17	Contig	University College Cork	SAMN06309537	GCA_002028205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/205/GCA_002028205.1_ASM202820v1	-	MQ150013
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.65432	30.5	-	CUKG01	23	1731	1633	3/31/15	3/18/17	Scaffold	SC	SAMEA1010344	GCA_001237785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/785/GCA_001237785.1_7038_3_71	-	OXC6321
Salmonella enterica subsp. enterica serovar Heidelberg str. SARA37	1029996	PRJNA66673	66673	Proteobacteria	Gammaproteobacteria	4.94538	52	-	AMLR01	74	5106	4853	3/27/14	2/26/17	Contig	FDA	SAMN01087967	GCA_000603285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/285/GCA_000603285.1_ASM60328v1	24732280	SARA37
Staphylococcus aureus M0807	1388593	PRJNA216766	216766	Terrabacteria group	Firmicutes	2.86668	32.8	-	JCPF01	53	3034	2865	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325717	GCA_000543945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/945/GCA_000543945.1_Stap_aure_M0807_V1	-	M0807
Staphylococcus aureus M0808	1388594	PRJNA216767	216767	Terrabacteria group	Firmicutes	2.90633	32.9	-	JCPG01	60	3069	2883	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325718	GCA_000543965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/965/GCA_000543965.1_Stap_aure_M0808_V1	-	M0808
Salmonella enterica subsp. enterica serovar Heidelberg str. SARA32	1029998	PRJNA66677	66677	Proteobacteria	Gammaproteobacteria	4.75171	52.1	-	AMLU01	67	4848	4609	3/27/14	2/26/17	Contig	FDA	SAMN01087970	GCA_000603305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/305/GCA_000603305.1_ASM60330v1	24732280	SARA32
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.62728	30.4	-	CUQI01	14	1706	1611	3/31/15	3/18/17	Scaffold	SC	SAMEA1010468	GCA_001237865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/865/GCA_001237865.1_7092_1_42	-	OXC6489
Listeria monocytogenes	1639	PRJNA371539	371539	Terrabacteria group	Firmicutes	2.9155	37.8	-	MVEX01	8	3001	2907	3/15/17	3/17/17	Contig	University College Cork	SAMN06309535	GCA_002028225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/225/GCA_002028225.1_ASM202822v1	-	MQ150011
Mycobacterium tuberculosis H2581	1448828	PRJNA235840	235840	Terrabacteria group	Actinobacteria	4.39206	65.6	-	JKHZ01	84	4331	4120	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599174	GCA_000665685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/685/GCA_000665685.1_Myco_tube_H2581_V1	-	H2581
Escherichia coli HVH 147 (4-5893887)	1281080	PRJNA186179	186179	Proteobacteria	Gammaproteobacteria	4.93316	50.7	-	AVXG01	3	5017	4744	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885792	GCA_000458195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/195/GCA_000458195.1_Esch_coli_HVH_147_4-5893887_V1	-	HVH 147 (4-5893887)
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.9901	39.7	-	CQPY01	43	2198	1995	3/23/15	3/11/17	Contig	SC	SAMEA970223	GCA_001125905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/905/GCA_001125905.1_5159_5_1	-	BHN602
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.35461	66.5	-	LLPJ01	77	5829	5712	11/30/15	3/10/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128596	GCA_001451445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/445/GCA_001451445.1_WH-SGI-V-07422	-	WH-SGI-V-07422
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.91316	39	-	JWUZ03	217	3786	3573	12/29/14	3/18/17	Contig	JCVI	SAMN03084830	GCA_000809905.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/905/GCA_000809905.3_ASM80990v3	-	UH106_440
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.17021	41.1	-	FIFM01	47	2182	2060	2/10/16	3/19/17	Scaffold	SC	SAMEA1316539	GCA_900057495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/495/GCA_900057495.1_7114_5_10	-	LSS10
Streptococcus agalactiae	1311	PRJNA278931	278931	Terrabacteria group	Firmicutes	4.36801	36.5	-	LBKE01	84	4225	4123	6/2/15	6/2/15	Contig	Novartis Vaccines	SAMN03435031	GCA_001017915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/915/GCA_001017915.1_ASM101791v1	25946017	DK-PW-092
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.55412	50.8	-	FTZY01	372	5114	4324	1/28/17	2/26/17	Scaffold	SC	SAMEA1569795	GCA_900159555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/555/GCA_900159555.1_8489_1_79	-	sh1367
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.51257	28.4	-	FURF01	28	4325	4116	2/14/17	2/23/17	Scaffold	SC	SAMEA3375003	GCA_900165605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/605/GCA_900165605.1_16852_2_31	-	VRECD0030
Klebsiella pneumoniae	573	PRJEB7661	288866	Proteobacteria	Gammaproteobacteria	5.7907	57	-	CDFZ01	166	5983	5684	7/2/15	2/21/17	Contig	UNIMI	SAMEA3108431	GCA_001182665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/665/GCA_001182665.1_KpVA-15	-	-
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.9002	64.2	-	FVMR01	9	4921	4787	3/10/17	3/18/17	Scaffold	SC	SAMEA2275738	GCA_900136275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/275/GCA_900136275.1_12163_1_83	-	1012
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.08279	64.1	-	FSIM01	26	5091	4965	12/14/16	3/21/17	Scaffold	SC	SAMEA2275739	GCA_900136285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/285/GCA_900136285.1_12163_1_84	-	1013
Klebsiella pneumoniae	573	PRJNA293143	293143	Proteobacteria	Gammaproteobacteria	5.54908	57.3	-	LIPM01	111	5680	5417	8/27/15	2/21/17	Contig	UCLA Medical Center	SAMN03997506	GCA_001275285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/285/GCA_001275285.1_ASM127528v1	-	SY-A
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.07971	28.3	-	FURG01	31	3725	3586	2/14/17	2/23/17	Scaffold	SC	SAMEA3375005	GCA_900165615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/615/GCA_900165615.1_16852_2_33	-	VRECD0036
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.7926	50.5	-	FTZZ01	405	5443	4554	1/28/17	2/26/17	Scaffold	SC	SAMEA1569762	GCA_900159565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/565/GCA_900159565.1_8489_1_80	-	sh1368
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.48158	35.4	-	MAWP01	493	2498	2336	7/26/16	7/26/16	Contig	Novartis Vaccines	SAMN04481614	GCA_001694415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/415/GCA_001694415.1_ASM169441v1	27411639	BE-PW-163
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04046	41.1	-	FITC01	24	2054	1927	2/10/16	3/19/17	Scaffold	SC	SAMEA1566126	GCA_900057535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/535/GCA_900057535.1_8525_5_9	-	FX428_1
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.88284	38.8	-	JWUY03	109	3752	3595	12/29/14	3/18/17	Contig	JCVI	SAMN03084831	GCA_000809925.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/925/GCA_000809925.3_ASM80992v3	-	UH384_444
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.07906	65.9	-	LLPL01	114	6763	6520	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128598	GCA_001451455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/455/GCA_001451455.1_WH-SGI-V-07424	26604259	WH-SGI-V-07424
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07125	39.6	-	CNTE02	118	2269	2049	3/23/15	3/11/17	Contig	SC	SAMEA1032697	GCA_001125925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/925/GCA_001125925.2_6999_3_8	-	25310
Escherichia coli HVH 149 (4-4451880)	1281082	PRJNA186181	186181	Proteobacteria	Gammaproteobacteria	5.20853	50.4	-	AVXI01	15	5335	4969	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885794	GCA_000458215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/215/GCA_000458215.1_Esch_coli_HVH_149_4-4451880_V1	-	HVH 149 (4-4451880)
Mycobacterium tuberculosis H2264	1448829	PRJNA235841	235841	Terrabacteria group	Actinobacteria	4.41886	65.6	-	JKHY01	75	4318	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599175	GCA_000665705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/705/GCA_000665705.1_Myco_tube_H2264_V1	-	H2264
Listeria monocytogenes	1639	PRJNA371539	371539	Terrabacteria group	Firmicutes	2.98654	37.8	-	MVEY01	11	3097	3002	3/15/17	3/17/17	Contig	University College Cork	SAMN06309536	GCA_002028235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/235/GCA_002028235.1_ASM202823v1	-	MQ150012
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.79899	30.2	-	CUQE01	25	1924	1749	3/31/15	4/10/17	Scaffold	SC	SAMEA1010304	GCA_001238105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/105/GCA_001238105.1_7092_1_39	-	OXC6486
Salmonella enterica subsp. enterica serovar Heidelberg str. SARA31	1029999	PRJNA66679	66679	Proteobacteria	Gammaproteobacteria	4.75177	52.1	-	AMLV01	63	4850	4614	3/27/14	2/26/17	Contig	FDA	SAMN01087971	GCA_000603325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/325/GCA_000603325.1_ASM60332v1	24732280	SARA31
Staphylococcus aureus M0809	1388595	PRJNA216768	216768	Terrabacteria group	Firmicutes	2.90973	32.9	-	JCPH01	66	3094	2913	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325719	GCA_000543985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/543/985/GCA_000543985.1_Stap_aure_M0809_V1	-	M0809
Staphylococcus aureus M0810	1388596	PRJNA216769	216769	Terrabacteria group	Firmicutes	2.84488	32.8	-	JCPI01	40	2980	2841	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325720	GCA_000544005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/005/GCA_000544005.1_Stap_aure_M0810_V1	-	M0810
Salmonella enterica subsp. enterica serovar Heidelberg str. N418	1030005	PRJNA66707	66707	Proteobacteria	Gammaproteobacteria	5.13043	52.226	plasmid pCFSAN000405_01:NZ_CP009409.2/CP009409.2	AMMB01	147	5355	5016	3/27/14	2/27/17	Contig	FDA	SAMN01087978	GCA_000603345.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/345/GCA_000603345.3_ASM60334v3	24732280	N418
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.83943	30.1	-	CUSO01	61	1988	1839	3/31/15	4/21/17	Scaffold	SC	SAMEA1010582	GCA_001238785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/785/GCA_001238785.1_7092_1_95	-	OXC6542
Listeria monocytogenes	1639	PRJNA371539	371539	Terrabacteria group	Firmicutes	2.93867	37.9	-	MVFA01	9	3026	2949	3/15/17	3/17/17	Contig	University College Cork	SAMN06309517	GCA_002028265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/265/GCA_002028265.1_ASM202826v1	-	MQ130037
Mycobacterium tuberculosis H2398	1448830	PRJNA235842	235842	Terrabacteria group	Actinobacteria	4.42865	65.6	-	JKHX01	63	4326	4109	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599176	GCA_000665725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/725/GCA_000665725.1_Myco_tube_H2398_V1	-	H2398
Escherichia coli HVH 150 (4-3258106)	1281083	PRJNA186182	186182	Proteobacteria	Gammaproteobacteria	5.14354	50.7	-	AVXJ01	11	5226	4861	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885795	GCA_000458235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/235/GCA_000458235.1_Esch_coli_HVH_150_4-3258106_V1	-	HVH 150 (4-3258106)
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.17476	39.5	-	CLXJ01	76	2442	2213	3/21/15	3/11/17	Contig	SC	SAMEA1028890	GCA_001126025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/025/GCA_001126025.1_6983_5_9	-	SMRU2313
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.71974	66.1	-	LLPM01	103	6421	6217	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128599	GCA_001451485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/485/GCA_001451485.1_WH-SGI-V-07425	26604259	WH-SGI-V-07425
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.01646	39	-	JWUX03	156	3960	3768	12/29/14	3/18/17	Contig	JCVI	SAMN03084832	GCA_000809945.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/945/GCA_000809945.3_ASM80994v3	-	UH326_445
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.08025	41.2	-	FIIP01	46	2112	1977	2/10/16	3/19/17	Scaffold	SC	SAMEA1316547	GCA_900058485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/485/GCA_900058485.1_7114_5_9	-	LSS9
Streptococcus agalactiae	1311	PRJNA311314	311314	Terrabacteria group	Firmicutes	2.48715	35.4	-	MAWO01	553	2507	2321	7/26/16	7/26/16	Contig	Novartis Vaccines	SAMN04481613	GCA_001694615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/694/615/GCA_001694615.1_ASM169461v1	27411639	BE-PW-162
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.85107	50.5	-	FUAA01	416	5494	4613	1/28/17	3/2/17	Scaffold	SC	SAMEA1569782	GCA_900159575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/575/GCA_900159575.1_8489_1_81	-	sh1369
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.51363	28.5	-	FURI01	29	4310	4115	2/14/17	2/23/17	Scaffold	SC	SAMEA3375006	GCA_900165635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/635/GCA_900165635.1_16852_2_34	-	VRECD0037
Klebsiella pneumoniae	573	PRJNA293143	293143	Proteobacteria	Gammaproteobacteria	5.70596	57.1	-	LIPL01	132	5877	5596	8/27/15	2/21/17	Contig	UCLA Medical Center	SAMN03997511	GCA_001275295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/295/GCA_001275295.1_ASM127529v1	-	SY-B
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.43717	64	-	FVMQ01	67	5444	5265	3/10/17	3/18/17	Scaffold	SC	SAMEA2275741	GCA_900136295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/295/GCA_900136295.1_12163_1_86	-	1015
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.67992	64	-	FVMS01	68	5867	5624	3/10/17	3/18/17	Scaffold	SC	SAMEA2275742	GCA_900136305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/305/GCA_900136305.1_12163_1_87	-	1016
Klebsiella pneumoniae	573	PRJNA293143	293143	Proteobacteria	Gammaproteobacteria	5.69538	57.1	-	LIPK01	114	5873	5590	8/27/15	2/21/17	Contig	UCLA Medical Center	SAMN03997513	GCA_001275305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/305/GCA_001275305.1_ASM127530v1	-	SY-B2
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.1211	28.6	-	FURJ01	23	3866	3683	2/14/17	2/23/17	Scaffold	SC	SAMEA3375023	GCA_900165645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/645/GCA_900165645.1_16852_2_51	-	VRECD0057
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.75007	50.5	-	FUAB01	402	5364	4502	1/28/17	2/26/17	Scaffold	SC	SAMEA1569847	GCA_900159585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/585/GCA_900159585.1_8489_1_83	-	sh1371
Streptococcus agalactiae	1311	PRJNA382326	382326	Terrabacteria group	Firmicutes	2.02	35.3	-	NDGE01	34	2122	1895	5/15/17	5/15/17	Contig	Swiss Tropical and Public Health Institute	SAMN06707236	GCA_002135495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/495/GCA_002135495.1_ASM213549v1	-	ST 612
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.06115	41.1	-	FIQS01	47	2064	1967	2/10/16	3/19/17	Scaffold	SC	SAMEA1566017	GCA_900058515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/515/GCA_900058515.1_8525_5_57	-	SS82
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.86244	38.9	-	JWUW03	224	3736	3564	12/29/14	3/18/17	Contig	JCVI	SAMN03084833	GCA_000809965.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/965/GCA_000809965.3_ASM80996v3	-	UH106_447
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.04791	65.9	-	LLPO01	130	6743	6522	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128601	GCA_001451535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/535/GCA_001451535.1_WH-SGI-V-07427	26604259	WH-SGI-V-07427
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.12849	39.7	-	CKHY01	82	2302	2068	3/21/15	3/11/17	Contig	SC	SAMEA1023952	GCA_001126065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/065/GCA_001126065.1_6631_3_18	-	type strain: N
Escherichia coli HVH 151 (4-5755573)	1281084	PRJNA186183	186183	Proteobacteria	Gammaproteobacteria	5.31908	50.7	-	AVXK01	10	5499	5158	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885796	GCA_000458255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/255/GCA_000458255.1_Esch_coli_HVH_151_4-5755573_V1	-	HVH 151 (4-5755573)
Mycobacterium tuberculosis H3367	1448833	PRJNA235845	235845	Terrabacteria group	Actinobacteria	4.41654	65.5	-	JKHV01	92	4330	4088	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599179	GCA_000665745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/745/GCA_000665745.1_Myco_tube_H3367_V1	-	H3367
Listeria monocytogenes	1639	PRJNA371539	371539	Terrabacteria group	Firmicutes	2.90196	37.8	-	MVEF01	13	2937	2849	3/15/17	3/17/17	Contig	University College Cork	SAMN06309516	GCA_002029185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/185/GCA_002029185.1_ASM202918v1	-	MQ130033
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.74831	30.4	-	CUVX01	16	1868	1779	3/31/15	3/18/17	Scaffold	SC	SAMEA1401513	GCA_001238885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/885/GCA_001238885.1_7213_3_92	-	OXC6637
Salmonella enterica subsp. enterica serovar Heidelberg str. N19992	1030006	PRJNA66709	66709	Proteobacteria	Gammaproteobacteria	4.78157	52.1	-	AMMC01	95	4889	4633	3/27/14	2/26/17	Contig	FDA	SAMN01087979	GCA_000603365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/365/GCA_000603365.1_ASM60336v1	24732280	N19992
Staphylococcus aureus M0811	1388597	PRJNA216770	216770	Terrabacteria group	Firmicutes	2.90265	32.9	-	JCPJ01	81	3096	2915	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325721	GCA_000544025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/025/GCA_000544025.1_Stap_aure_M0811_V1	-	M0811
Staphylococcus aureus M0812	1388598	PRJNA216771	216771	Terrabacteria group	Firmicutes	2.89957	32.8	-	JCPK01	64	3088	2925	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325722	GCA_000544045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/045/GCA_000544045.1_Stap_aure_M0812_V1	-	M0812
Salmonella enterica subsp. enterica serovar Heidelberg str. N653	1054966	PRJNA69855	69855	Proteobacteria	Gammaproteobacteria	4.88415	52	-	AMMW01	355	5200	4676	3/27/14	2/26/17	Contig	FDA	SAMN01088003	GCA_000603485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/485/GCA_000603485.1_ASM60348v1	24732280	N653
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.73018	30.3	-	CURC01	20	1837	1711	3/31/15	3/18/17	Scaffold	SC	SAMEA1010673	GCA_001238965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/965/GCA_001238965.1_7092_1_60	-	OXC6507
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	3.10786	37.8	-	NBIN01	37	3196	3118	4/11/17	4/13/17	Contig	FDA/CFSAN	SAMN04506982	GCA_002086985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/086/985/GCA_002086985.1_ASM208698v1	-	FDA00009921
Mycobacterium tuberculosis M2828	1448834	PRJNA235846	235846	Terrabacteria group	Actinobacteria	4.40822	65.6	-	JKHU01	112	4354	4087	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599180	GCA_000665765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/765/GCA_000665765.1_Myco_tube_M2828_V1	-	M2828
Escherichia coli HVH 153 (3-9344314)	1281086	PRJNA186185	186185	Proteobacteria	Gammaproteobacteria	5.3033	50.4	-	AVXM01	14	5455	5111	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885798	GCA_000458275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/275/GCA_000458275.1_Esch_coli_HVH_153_3-9344314_V1	-	HVH 153 (3-9344314)
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.0902	39.7	-	CRJG01	52	2328	2101	3/23/15	3/11/17	Contig	SC	SAMEA1025221	GCA_001126145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/145/GCA_001126145.1_6753_2_16	-	SMRU1505
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.70742	66.2	-	LLPQ01	92	6446	6250	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128603	GCA_001451565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/565/GCA_001451565.1_WH-SGI-V-07484	26604259	WH-SGI-V-07484
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.02988	39	-	JWUU03	194	3922	3791	12/29/14	3/18/17	Contig	JCVI	SAMN03084835	GCA_000809985.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/985/GCA_000809985.3_ASM80998v3	-	UH81_452
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.20633	41.2	-	FIHE01	44	2194	2063	2/10/16	3/19/17	Scaffold	SC	SAMEA1316639	GCA_900058695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/695/GCA_900058695.1_7114_5_58	-	LSS58
Streptococcus agalactiae	1311	PRJNA382326	382326	Terrabacteria group	Firmicutes	2.02103	35.2	-	NDGD01	58	2177	1867	5/15/17	5/15/17	Contig	Swiss Tropical and Public Health Institute	SAMN06707237	GCA_002135525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/525/GCA_002135525.1_ASM213552v1	-	ST 615
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.87108	50.5	-	FUAC01	431	5551	4669	1/28/17	2/26/17	Scaffold	SC	SAMEA1569862	GCA_900159595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/595/GCA_900159595.1_8489_1_82	-	sh1370
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.19141	28.2	-	FURK01	30	3947	3771	2/14/17	2/23/17	Scaffold	SC	SAMEA3375024	GCA_900165655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/655/GCA_900165655.1_16852_2_52	-	VRECD0058
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.70834	57	-	LJDK02	141	5825	5478	10/15/15	2/21/17	Contig	University of KwaZulu Natal	SAMN04011419	GCA_001316495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/495/GCA_001316495.2_UNN39_S3v.02	-	ST101:950171785
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.47653	63.9	-	FVMT01	20	5669	5435	3/10/17	3/18/17	Scaffold	SC	SAMEA2275740	GCA_900136315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/315/GCA_900136315.1_12163_1_85	-	1014
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.89996	64.2	-	FVMU01	4	4922	4792	3/10/17	3/18/17	Scaffold	SC	SAMEA2275743	GCA_900136325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/325/GCA_900136325.1_12163_1_88	-	1017
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.76345	56.9	-	LJDT02	180	5876	5519	10/15/15	2/21/17	Contig	University of KwaZulu Natal	SAMN04011426	GCA_001316565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/565/GCA_001316565.2_UNN46_S10v.02	-	ST101:960186733
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.18964	28.9	-	FURL01	36	3940	3774	2/14/17	2/23/17	Scaffold	SC	SAMEA3375025	GCA_900165665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/665/GCA_900165665.1_16852_2_53	-	VRECD0060
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.74091	50.5	-	FUAF01	406	5318	4494	1/28/17	2/26/17	Scaffold	SC	SAMEA1569899	GCA_900159605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/605/GCA_900159605.1_8489_1_84	-	sh1372
Streptococcus agalactiae	1311	PRJNA382326	382326	Terrabacteria group	Firmicutes	1.99963	35.3	-	NDGF01	30	2078	1883	5/15/17	5/15/17	Contig	Swiss Tropical and Public Health Institute	SAMN06707235	GCA_002135545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/545/GCA_002135545.1_ASM213554v1	-	ST 617
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.36735	41.3	-	FIIM01	111	2359	2173	2/10/16	3/19/17	Scaffold	SC	SAMEA1316616	GCA_900058715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/715/GCA_900058715.1_7114_5_88	-	LSS88
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.88689	38.8	-	JWUV03	128	3759	3601	12/29/14	3/18/17	Contig	JCVI	SAMN03084834	GCA_000810005.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/005/GCA_000810005.3_ASM81000v3	-	UH384_450
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.37866	66.5	-	LLPR01	55	6076	5925	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128604	GCA_001451575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/575/GCA_001451575.1_WH-SGI-V-07485	26604259	WH-SGI-V-07485
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09181	39.5	-	CKZE01	54	2294	2061	3/21/15	3/11/17	Contig	SC	SAMEA1026019	GCA_001126225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/225/GCA_001126225.1_6840_1_12	-	SMRU1764
Escherichia coli HVH 154 (4-5636698)	1281087	PRJNA186186	186186	Proteobacteria	Gammaproteobacteria	5.33657	50.6	-	AVXN01	49	5319	4977	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885799	GCA_000458295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/295/GCA_000458295.1_Esch_coli_HVH_154_4-5636698_V1	-	HVH 154 (4-5636698)
Mycobacterium tuberculosis M2346	1448836	PRJNA235848	235848	Terrabacteria group	Actinobacteria	4.42782	65.6	-	JKHS01	80	4328	4116	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599182	GCA_000665785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/785/GCA_000665785.1_Myco_tube_M2346_V1	-	M2346
Listeria monocytogenes	1639	PRJNA335730	335730	Terrabacteria group	Firmicutes	2.9565	38.1	-	MCHK01	20	2965	2890	4/21/17	4/24/17	Contig	Iowa State University	SAMN05453151	GCA_002103255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/255/GCA_002103255.1_ASM210325v1	-	N12-0367
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.83909	30.1	-	CUUV01	55	1985	1834	3/31/15	3/18/17	Scaffold	SC	SAMEA1401195	GCA_001238985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/985/GCA_001238985.1_7213_3_66	-	OXC6610
Salmonella enterica subsp. enterica serovar Heidelberg str. 21381	1128955	PRJNA80505	80505	Proteobacteria	Gammaproteobacteria	5.00552	52.2	-	AMMZ01	93	5183	4865	3/27/14	2/26/17	Contig	FDA	SAMN01088006	GCA_000603505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/505/GCA_000603505.1_ASM60350v1	24732280	21381
Staphylococcus aureus M0814	1388599	PRJNA216772	216772	Terrabacteria group	Firmicutes	2.87675	32.8	-	JCPL01	50	3042	2869	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325723	GCA_000544065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/065/GCA_000544065.1_Stap_aure_M0814_V1	-	M0814
Staphylococcus aureus M0817	1388600	PRJNA216773	216773	Terrabacteria group	Firmicutes	2.87378	32.8	-	JCPM01	38	3035	2862	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325724	GCA_000544085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/085/GCA_000544085.1_Stap_aure_M0817_V1	-	M0817
Salmonella enterica subsp. enterica serovar Heidelberg str. N4630	1128956	PRJNA80507	80507	Proteobacteria	Gammaproteobacteria	4.87453	52.2	-	AMNA01	114	5044	4742	3/27/14	2/26/17	Contig	FDA	SAMN01088007	GCA_000603525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/525/GCA_000603525.1_ASM60352v1	24732280	N4630
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.78174	30.1	-	CUTM01	56	1883	1723	3/31/15	3/18/17	Scaffold	SC	SAMEA1401318	GCA_001239045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/045/GCA_001239045.1_7213_3_3	-	OXC6546
Listeria monocytogenes	1639	PRJNA335730	335730	Terrabacteria group	Firmicutes	3.10754	38	-	MCHL01	35	3175	3095	4/21/17	4/24/17	Contig	Iowa State University	SAMN05453153	GCA_002103315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/315/GCA_002103315.1_ASM210331v1	-	N13-0119
Mycobacterium tuberculosis M2350	1448837	PRJNA235849	235849	Terrabacteria group	Actinobacteria	4.41061	65.6	-	JKHR01	75	4319	4121	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599183	GCA_000665805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/805/GCA_000665805.1_Myco_tube_M2350_V1	-	M2350
Escherichia coli HVH 155 (4-4509048)	1281088	PRJNA186187	186187	Proteobacteria	Gammaproteobacteria	5.27208	50.7	-	AVXO01	9	5491	5171	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885800	GCA_000458315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/315/GCA_000458315.1_Esch_coli_HVH_155_4-4509048_V1	-	HVH 155 (4-4509048)
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.14355	39.6	-	CLKR01	84	2372	2142	3/21/15	3/11/17	Contig	SC	SAMEA1028797	GCA_001126365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/365/GCA_001126365.1_6938_5_15	-	SMRU2655
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.45306	66	-	LLPT01	134	6182	5957	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128606	GCA_001451625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/625/GCA_001451625.1_WH-SGI-V-07487	26604259	WH-SGI-V-07487
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.94748	39.2	-	JWUT03	379	3937	3682	12/29/14	3/18/17	Contig	JCVI	SAMN03084837	GCA_000810025.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/025/GCA_000810025.3_ASM81002v3	-	UH430_459
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.15885	41	-	FIKI01	44	2162	1987	2/10/16	3/19/17	Scaffold	SC	SAMEA1316654	GCA_900059145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/145/GCA_900059145.1_7054_7_89	-	SS1040
Streptococcus agalactiae	1311	PRJNA382326	382326	Terrabacteria group	Firmicutes	2.01338	35.3	-	NDGG01	29	2098	1876	5/15/17	5/15/17	Contig	Swiss Tropical and Public Health Institute	SAMN06707234	GCA_002135575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/575/GCA_002135575.1_ASM213557v1	-	ST 610
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.77273	50.5	-	FUAE01	411	5409	4505	1/28/17	2/26/17	Scaffold	SC	SAMEA1569883	GCA_900159615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/615/GCA_900159615.1_8489_1_85	-	sh1373
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.18555	28.2	-	FURM01	29	3932	3762	2/14/17	2/23/17	Scaffold	SC	SAMEA3375026	GCA_900165675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/675/GCA_900165675.1_16852_2_54	-	VRECD0066
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.73193	57	-	LJEA02	189	5849	5495	10/15/15	2/21/17	Contig	University of KwaZulu Natal	SAMN04011433	GCA_001316645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/645/GCA_001316645.2_v02	-	ST101:951373950
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.79697	64.2	-	FVMW01	5	4821	4701	3/10/17	3/18/17	Scaffold	SC	SAMEA2275845	GCA_900136345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/345/GCA_900136345.1_12163_2_79	-	1119
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.17521	64.1	-	FSIQ01	18	5227	5104	12/14/16	3/21/17	Scaffold	SC	SAMEA2275745	GCA_900136355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/355/GCA_900136355.1_12163_1_90	-	1019
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.7298	57	-	LJEC02	175	5808	5493	10/15/15	2/21/17	Contig	University of KwaZulu Natal	SAMN04011436	GCA_001316695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/695/GCA_001316695.2_v02	-	ST101:945165838
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.19405	28.2	-	FURO01	33	3918	3763	2/14/17	2/23/17	Scaffold	SC	SAMEA3375027	GCA_900165685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/685/GCA_900165685.1_16852_2_55	-	VRECD0067
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.79717	50.5	-	FUAG01	424	5424	4559	1/28/17	2/26/17	Scaffold	SC	SAMEA1569734	GCA_900159625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/625/GCA_900159625.1_8489_1_87	-	sh1375
Streptococcus agalactiae	1311	PRJNA382326	382326	Terrabacteria group	Firmicutes	1.98047	35.1	-	NDGC01	53	2109	1812	5/15/17	5/15/17	Contig	Swiss Tropical and Public Health Institute	SAMN06707238	GCA_002135595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/595/GCA_002135595.1_ASM213559v1	-	ST 614
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04136	41.2	-	FIPK01	22	2039	1938	2/10/16	3/19/17	Scaffold	SC	SAMEA1566193	GCA_900059515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/515/GCA_900059515.1_8525_5_22	-	SS16
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.98558	39	-	JWUS03	209	3914	3730	12/29/14	3/18/17	Contig	JCVI	SAMN03084838	GCA_000810045.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/045/GCA_000810045.3_ASM81004v3	-	UH326_461
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.3016	66.5	-	LLPW01	67	5950	5791	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128609	GCA_001451685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/685/GCA_001451685.1_WH-SGI-V-07490	26604259	WH-SGI-V-07490
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05639	39.6	-	COBO02	110	2244	2026	3/22/15	3/11/17	Contig	SC	SAMEA1463208	GCA_001126425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/425/GCA_001126425.2_7622_2_5	-	BR1014
Escherichia coli HVH 156 (4-3206505)	1281089	PRJNA186188	186188	Proteobacteria	Gammaproteobacteria	5.32522	50.5	-	AVXP01	13	5521	5123	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885801	GCA_000458335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/335/GCA_000458335.1_Esch_coli_HVH_156_4-3206505_V1	-	HVH 156 (4-3206505)
Mycobacterium tuberculosis M13	1448838	PRJNA235850	235850	Terrabacteria group	Actinobacteria	4.43314	65.6	-	JKHQ01	73	4324	4111	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02599184	GCA_000665825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/825/GCA_000665825.1_Myco_tube_M_13_V1	-	M13
Listeria monocytogenes	1639	PRJNA377767	377767	Terrabacteria group	Firmicutes	3.01872	37.9	-	NAUG01	22	3120	3028	4/28/17	5/3/17	Contig	Queensland Health	SAMN06472826	GCA_002114645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/645/GCA_002114645.1_ASM211464v1	-	FRR B 2974
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.70364	30.4	-	CUPV01	27	1807	1701	3/31/15	3/18/17	Scaffold	SC	SAMEA1010628	GCA_001239105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/105/GCA_001239105.1_7092_1_30	-	OXC6477
Salmonella enterica subsp. enterica serovar Heidelberg str. N19871	1124938	PRJNA78481	78481	Proteobacteria	Gammaproteobacteria	4.87329	52.1	-	AMNC01	61	5011	4733	3/27/14	2/26/17	Contig	FDA	SAMN01088009	GCA_000603545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/545/GCA_000603545.1_ASM60354v1	24732280	N19871
Staphylococcus aureus M0818	1388601	PRJNA216774	216774	Terrabacteria group	Firmicutes	2.9525	32.9	-	JCPN01	71	3129	2917	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325725	GCA_000544105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/105/GCA_000544105.1_Stap_aure_M0818_V1	-	M0818
Staphylococcus aureus M0819	1388602	PRJNA216775	216775	Terrabacteria group	Firmicutes	2.85346	32.8	-	JCPO01	66	3001	2830	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325726	GCA_000544125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/125/GCA_000544125.1_Stap_aure_M0819_V1	-	M0819
Salmonella enterica subsp. enterica serovar Heidelberg str. N15757	1128957	PRJNA80509	80509	Proteobacteria	Gammaproteobacteria	5.11998	51.8	-	AMND01	209	5351	4951	3/27/14	2/26/17	Contig	FDA	SAMN01088010	GCA_000603565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/565/GCA_000603565.1_ASM60356v1	24732280	N15757
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.84275	30.1	-	CUST01	45	1956	1799	3/31/15	3/18/17	Scaffold	SC	SAMEA1401415	GCA_001239205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/205/GCA_001239205.1_7213_3_12	-	OXC6555
Listeria monocytogenes	1639	PRJNA377767	377767	Terrabacteria group	Firmicutes	3.05614	37.8	-	NAUF01	40	3129	3041	4/28/17	5/3/17	Contig	Queensland Health	SAMN06472827	GCA_002114665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/665/GCA_002114665.1_ASM211466v1	-	FRR B 2965
Mycobacterium tuberculosis T92	515617	PRJNA238920	238920	Terrabacteria group	Actinobacteria	4.41004	65.5	-	JLDA01	12	4286	4071	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02400329	GCA_000665845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/845/GCA_000665845.1_Myco_tube_T92_V1	-	T92
Escherichia coli HVH 157 (4-3406229)	1281090	PRJNA186189	186189	Proteobacteria	Gammaproteobacteria	5.23508	50.3	-	AVXQ01	23	5339	4944	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885802	GCA_000458355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/355/GCA_000458355.1_Esch_coli_HVH_157_4-3406229_V1	-	HVH 157 (4-3406229)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.1064	39.6	-	CNWK02	142	2306	2083	3/23/15	3/5/17	Contig	SC	SAMEA1032665	GCA_001126445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/445/GCA_001126445.2_7001_2_11	-	R34-3115
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.74479	66.1	-	LLQC01	129	6464	6236	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128615	GCA_001451785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/785/GCA_001451785.1_WH-SGI-V-07496	26604259	WH-SGI-V-07496
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.99616	39	-	JWUR03	165	3923	3733	12/29/14	3/18/17	Contig	JCVI	SAMN03084839	GCA_000810065.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/065/GCA_000810065.3_ASM81006v3	-	UH17_465
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.0376	41.2	-	FIQL01	304	2057	1928	2/10/16	3/19/17	Scaffold	SC	SAMEA1566184	GCA_900059535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/535/GCA_900059535.1_8525_5_49	-	SS66
Streptococcus agalactiae	1311	PRJNA377856	377856	Terrabacteria group	Firmicutes	1.80154	35.3	-	NBUW01	21	1867	1651	6/8/17	6/8/17	Contig	Cefas	SAMN06673413	GCA_002180355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/355/GCA_002180355.1_ASM218035v1	-	GS16-0031
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.6218	50.8	-	FUAJ01	384	5217	4397	1/28/17	2/26/17	Scaffold	SC	SAMEA1569755	GCA_900159655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/655/GCA_900159655.1_8489_1_90	-	sh1378
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.10618	28.4	-	FURN01	42	3861	3671	2/14/17	2/23/17	Scaffold	SC	SAMEA3375028	GCA_900165695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/695/GCA_900165695.1_16852_2_56	-	VRECD0068
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.72152	57	-	LJEE02	150	5803	5476	10/15/15	2/21/17	Contig	University of KwaZulu Natal	SAMN04011438	GCA_001316745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/745/GCA_001316745.2_18_S10v02	-	ST101:945169659
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.24625	64.1	-	FSIP01	17	5280	5125	12/14/16	3/21/17	Scaffold	SC	SAMEA2275840	GCA_900136365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/365/GCA_900136365.1_12163_2_74	-	1114
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.38658	64	-	FVMV01	38	5403	5232	3/10/17	3/18/17	Scaffold	SC	SAMEA2275744	GCA_900136375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/375/GCA_900136375.1_12163_1_89	-	1018
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.86352	57	-	LJEH02	154	5976	5635	10/15/15	2/21/17	Contig	University of KwaZulu Natal	SAMN04011441	GCA_001316765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/765/GCA_001316765.2_29_S13v02	-	ST2017:950118422
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.18772	28.2	-	FURP01	32	3916	3768	2/14/17	2/23/17	Scaffold	SC	SAMEA3375029	GCA_900165705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/705/GCA_900165705.1_16852_2_57	-	VRECD0059
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.76814	50.5	-	FUAH01	414	5382	4537	1/28/17	2/26/17	Scaffold	SC	SAMEA1569771	GCA_900159665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/665/GCA_900159665.1_8489_1_91	-	sh1379
Streptococcus agalactiae	1311	PRJNA377856	377856	Terrabacteria group	Firmicutes	1.80154	35.3	-	NBUX01	21	1867	1651	6/8/17	6/8/17	Contig	Cefas	SAMN06673412	GCA_002180365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/365/GCA_002180365.1_ASM218036v1	-	GS16-0008
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.07934	41.2	-	FIOB01	22	2086	1982	2/10/16	3/19/17	Scaffold	SC	SAMEA1566124	GCA_900060125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/125/GCA_900060125.1_8337_6_50	-	EN015
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.96627	39	-	JWWM03	168	3883	3718	12/29/14	3/18/17	Contig	JCVI	SAMN03084787	GCA_000810085.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/085/GCA_000810085.3_ASM81008v3	-	UH370_269
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.78542	65.9	-	LLQD01	149	6513	6253	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128616	GCA_001451805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/805/GCA_001451805.1_WH-SGI-V-07497	26604259	WH-SGI-V-07497
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.02716	39.6	-	CMTQ01	61	2199	1950	3/22/15	3/11/17	Contig	SC	SAMEA1022841	GCA_001126465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/465/GCA_001126465.1_5737_2_7	-	16180
Escherichia coli HVH 158 (4-3224287)	1281091	PRJNA186190	186190	Proteobacteria	Gammaproteobacteria	5.00683	50.5	-	AVXR01	6	5088	4764	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885803	GCA_000458375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/375/GCA_000458375.1_Esch_coli_HVH_158_4-3224287_V1	-	HVH 158 (4-3224287)
Mycobacterium tuberculosis T85	520141	PRJNA238923	238923	Terrabacteria group	Actinobacteria	4.40257	65.6	-	JLCX01	8	4295	4100	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02400331	GCA_000665885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/885/GCA_000665885.1_Myco_tube_T85_V1	-	T85
Listeria monocytogenes	1639	PRJNA377767	377767	Terrabacteria group	Firmicutes	2.98219	37.9	-	NAUH01	13	3069	2977	4/28/17	5/3/17	Contig	Queensland Health	SAMN06472825	GCA_002114675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/675/GCA_002114675.1_ASM211467v1	-	FRR B 2943
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.73038	30.3	-	CURV01	18	1835	1718	3/31/15	3/18/17	Scaffold	SC	SAMEA1010531	GCA_001239345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/345/GCA_001239345.1_7092_1_78	-	OXC6525
Salmonella enterica subsp. enterica serovar Heidelberg str. N26457	1124939	PRJNA78483	78483	Proteobacteria	Gammaproteobacteria	5.00223	52.1	-	AMNE01	82	5168	4897	3/27/14	2/26/17	Contig	FDA	SAMN01088011	GCA_000603585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/585/GCA_000603585.1_ASM60358v1	24732280	N26457
Staphylococcus aureus M0820	1388603	PRJNA216776	216776	Terrabacteria group	Firmicutes	2.81869	32.9	-	JCPP01	40	2926	2737	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325727	GCA_000544145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/145/GCA_000544145.1_Stap_aure_M0820_V1	-	M0820
Staphylococcus aureus M0821	1388604	PRJNA216777	216777	Terrabacteria group	Firmicutes	2.73941	32.9	-	JCPQ01	32	2848	2667	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325728	GCA_000544165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/165/GCA_000544165.1_Stap_aure_M0821_V1	-	M0821
Salmonella enterica subsp. enterica serovar Heidelberg str. N18393	1124940	PRJNA78485	78485	Proteobacteria	Gammaproteobacteria	4.90095	52.1	-	AMNF01	85	5042	4780	3/27/14	2/26/17	Contig	FDA	SAMN01088012	GCA_000603605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/605/GCA_000603605.1_ASM60360v1	24732280	N18393
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	1.64131	30.4	-	CUIG01	17	1722	1597	3/31/15	3/18/17	Scaffold	SC	SAMEA1010347	GCA_001239445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/445/GCA_001239445.1_7038_3_25	-	OXC6274
Listeria monocytogenes	1639	PRJNA377767	377767	Terrabacteria group	Firmicutes	2.98206	37.9	-	NAUI01	14	3066	2977	4/28/17	5/3/17	Contig	Queensland Health	SAMN06472824	GCA_002114705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/705/GCA_002114705.1_ASM211470v1	-	FRR B 2952
Mycobacterium tuberculosis EAS054	520140	PRJNA238924	238924	Terrabacteria group	Actinobacteria	4.42045	65.6	-	JLCW01	7	4280	4096	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02400332	GCA_000665905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/905/GCA_000665905.1_Myco_tube_EAS054_V1	-	EAS054
Escherichia coli HVH 159 (4-5818141)	1281092	PRJNA186191	186191	Proteobacteria	Gammaproteobacteria	5.25667	50.3	-	AVXS01	13	5380	4992	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885804	GCA_000458395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/395/GCA_000458395.1_Esch_coli_HVH_159_4-5818141_V1	-	HVH 159 (4-5818141)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.039	39.6	-	CNWX02	135	2227	2025	3/23/15	3/11/17	Contig	SC	SAMEA1032727	GCA_001126525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/525/GCA_001126525.2_7001_2_22	-	R34-3127
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.48217	66.3	-	LLQI01	68	6155	5983	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128621	GCA_001451865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/865/GCA_001451865.1_WH-SGI-V-07502	26604259	WH-SGI-V-07502
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.85309	38.8	-	JWWK03	136	3726	3594	12/29/14	3/18/17	Contig	JCVI	SAMN03084790	GCA_000810125.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/125/GCA_000810125.3_ASM81012v3	-	UH66_276
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.24947	41.2	-	FILL01	64	2278	2140	2/10/16	3/19/17	Scaffold	SC	SAMEA1316529	GCA_900061355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/355/GCA_900061355.1_7054_7_63	-	SS975
Streptococcus agalactiae	1311	PRJNA377856	377856	Terrabacteria group	Firmicutes	1.80219	35.3	-	NBUU01	23	1871	1652	6/8/17	6/8/17	Contig	Cefas	SAMN06673415	GCA_002180375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/375/GCA_002180375.1_ASM218037v1	-	GS16-0046
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.83352	50.5	-	FUAK01	415	5481	4606	1/28/17	2/26/17	Scaffold	SC	SAMEA1569787	GCA_900159675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/675/GCA_900159675.1_8489_1_92	-	sh1380
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.12102	28.6	-	FURR01	29	3829	3684	2/14/17	2/23/17	Scaffold	SC	SAMEA3375030	GCA_900165715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/715/GCA_900165715.1_16852_2_58	-	VRECD0061
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.70748	57	-	LJDN02	146	5826	5482	10/15/15	2/21/17	Contig	University of KwaZulu Natal	SAMN04011420	GCA_001316785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/785/GCA_001316785.2_UNN40_S4v.02	-	ST101:950173000
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16621	64.1	-	FSIR01	17	5155	5006	12/14/16	3/22/17	Scaffold	SC	SAMEA2275851	GCA_900136385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/385/GCA_900136385.1_12163_2_84	-	1125
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98445	64	-	FVMY01	13	5027	4887	3/10/17	3/18/17	Scaffold	SC	SAMEA2275852	GCA_900136395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/395/GCA_900136395.1_12163_2_85	-	1126
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.65149	57.2	-	LJDR02	95	5655	5389	10/15/15	2/21/17	Contig	University of KwaZulu Natal	SAMN04011425	GCA_001316845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/845/GCA_001316845.2_UNN45_S9v.02	-	ST323:941530379
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.18743	28.2	-	FURQ01	31	3907	3766	2/14/17	2/23/17	Scaffold	SC	SAMEA3375031	GCA_900165725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/725/GCA_900165725.1_16852_2_59	-	VRECD0062
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.78483	50.5	-	FUAN01	427	5443	4560	1/28/17	2/26/17	Scaffold	SC	SAMEA1569810	GCA_900159695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/695/GCA_900159695.1_8489_1_94	-	sh1382
Streptococcus agalactiae	1311	PRJNA377856	377856	Terrabacteria group	Firmicutes	1.80154	35.3	-	NBUV01	21	1868	1652	6/8/17	6/8/17	Contig	Cefas	SAMN06673414	GCA_002180385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/385/GCA_002180385.1_ASM218038v1	-	GS16-0035
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.14017	41.1	-	FILR01	45	2134	1990	2/10/16	3/19/17	Scaffold	SC	SAMEA1316550	GCA_900061375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/375/GCA_900061375.1_7054_7_67	-	SS985
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.14224	39	-	JWWJ03	120	4045	3912	12/29/14	3/18/17	Contig	JCVI	SAMN03084791	GCA_000810145.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/145/GCA_000810145.3_ASM81014v3	-	UH71_277
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.19483	65.8	-	LLQL01	74	7048	6833	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128624	GCA_001451895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/895/GCA_001451895.1_WH-SGI-V-07505	26604259	WH-SGI-V-07505
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.18336	39.6	-	CKNI01	60	2410	2184	3/21/15	3/11/17	Contig	SC	SAMEA1023759	GCA_001126545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/545/GCA_001126545.1_6664_1_10	-	23A
Escherichia coli HVH 160 (4-5695937)	1281093	PRJNA186192	186192	Proteobacteria	Gammaproteobacteria	5.28686	50.5	-	AVXT01	12	5432	5081	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885805	GCA_000458415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/415/GCA_000458415.1_Esch_coli_HVH_160_4-5695937_V1	-	HVH 160 (4-5695937)
Mycobacterium tuberculosis T17	537210	PRJNA238925	238925	Terrabacteria group	Actinobacteria	4.4249	65.6	-	JLCV01	69	4335	4108	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02400333	GCA_000665925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/925/GCA_000665925.1_Myco_tube_T17_V1	-	T17
Listeria monocytogenes	1639	PRJNA377767	377767	Terrabacteria group	Firmicutes	3.05681	37.8	-	NAUJ01	31	3160	3049	4/28/17	5/3/17	Contig	Queensland Health	SAMN06472823	GCA_002114725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/725/GCA_002114725.1_ASM211472v1	-	FRR B 2987
Campylobacter jejuni	197	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.76469	30.1	-	CYRN01	157	1906	1695	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487080	GCA_001291505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/505/GCA_001291505.1_RC427_S44contigs.fa	-	RC427
Salmonella enterica subsp. enterica serovar Heidelberg str. 41567	1128958	PRJNA80511	80511	Proteobacteria	Gammaproteobacteria	4.90956	52.1	-	AMNG01	225	5166	4715	3/27/14	2/26/17	Contig	FDA	SAMN01088013	GCA_000603625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/625/GCA_000603625.1_ASM60362v1	24732280	41567
Staphylococcus aureus M0824	1388605	PRJNA216778	216778	Terrabacteria group	Firmicutes	2.87621	32.9	-	JCPR01	25	3023	2853	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325729	GCA_000544185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/185/GCA_000544185.1_Stap_aure_M0824_V1	-	M0824
Staphylococcus aureus M0826	1388606	PRJNA216779	216779	Terrabacteria group	Firmicutes	2.90006	32.9	-	JCPS01	43	3047	2854	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325730	GCA_000544205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/205/GCA_000544205.1_Stap_aure_M0826_V1	-	M0826
Salmonella enterica subsp. enterica serovar Heidelberg str. 41584	1128961	PRJNA80517	80517	Proteobacteria	Gammaproteobacteria	4.90739	52.1	-	AMNI01	142	5092	4720	3/27/14	2/26/17	Contig	FDA	SAMN01088015	GCA_000603665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/665/GCA_000603665.1_ASM60366v1	24732280	41584
Campylobacter jejuni	197	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.8017	31	-	CYQU01	169	1908	1720	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487061	GCA_001291565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/565/GCA_001291565.1_RC188_S25contigs.fa	-	RC188
Listeria monocytogenes	1639	PRJNA377767	377767	Terrabacteria group	Firmicutes	2.92498	37.9	-	NAUK01	28	2985	2888	4/28/17	5/3/17	Contig	Queensland Health	SAMN06472822	GCA_002114735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/735/GCA_002114735.1_ASM211473v1	-	FRR B 2967
Mycobacterium tuberculosis CPHL_A	611303	PRJNA238926	238926	Terrabacteria group	Actinobacteria	4.41679	65.5	-	JLCU01	3	4297	4057	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02400334	GCA_000665945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/945/GCA_000665945.1_Myco_tube_CPHL_A_V1	-	CPHL_A
Escherichia coli HVH 161 (4-3119890)	1281094	PRJNA186193	186193	Proteobacteria	Gammaproteobacteria	5.34178	50.4	-	AVXU01	16	5489	5098	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885806	GCA_000458435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/435/GCA_000458435.1_Esch_coli_HVH_161_4-3119890_V1	-	HVH 161 (4-3119890)
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.0159	39.7	-	CKGN01	39	2202	1974	3/21/15	3/9/17	Contig	SC	SAMEA1024067	GCA_001126585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/585/GCA_001126585.1_6631_1_21	-	type strain: N
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.84511	66.2	-	LLQP01	159	6578	6230	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128628	GCA_001451945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/945/GCA_001451945.1_WH-SGI-V-07618	26604259	WH-SGI-V-07618
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.16742	39	-	JWWI03	168	4081	3938	12/29/14	3/18/17	Contig	JCVI	SAMN03084792	GCA_000810165.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/165/GCA_000810165.3_ASM81016v3	-	UH71_278
Streptococcus suis	1307	PRJEB2670	204370	Terrabacteria group	Firmicutes	2.04889	41.2	-	FISB01	21	2060	1948	2/10/16	3/19/17	Scaffold	SC	SAMEA1566085	GCA_900061425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/425/GCA_900061425.1_8525_5_92	-	01ZN-TG187
Streptococcus agalactiae	1311	PRJNA327106	327106	Terrabacteria group	Firmicutes	2.01936	35.2	-	MKYE01	78	-	-	12/22/16	12/22/16	Scaffold	None	SAMN05509324	GCA_001914215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/215/GCA_001914215.1_ASM191421v1	-	-
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.81691	50.5	-	FUAM01	422	5468	4617	1/28/17	2/26/17	Scaffold	SC	SAMEA1569820	GCA_900159705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/705/GCA_900159705.1_8489_1_95	-	sh1383
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.18495	28.2	-	FURS01	26	3933	3767	2/14/17	2/23/17	Scaffold	SC	SAMEA3375032	GCA_900165735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/735/GCA_900165735.1_16852_2_60	-	VRECD0064
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.73841	56.8	-	LJDW02	130	5761	5469	10/15/15	2/21/17	Contig	University of KwaZulu Natal	SAMN04011430	GCA_001316865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/865/GCA_001316865.2_ASM131686v2	-	ST14:944535499
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82662	64.2	-	FVMX01	8	4763	4621	3/10/17	3/18/17	Scaffold	SC	SAMEA4008306	GCA_900136405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/405/GCA_900136405.1_20034_1_17	-	aerosol_Bronch_1
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82797	64.1	-	FVMZ01	9	4769	4622	3/10/17	3/18/17	Scaffold	SC	SAMEA4008307	GCA_900136425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/425/GCA_900136425.1_20034_1_18	-	aerosol_Bronch_2
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.73353	57	-	LJDZ02	195	5851	5493	10/15/15	2/21/17	Contig	University of KwaZulu Natal	SAMN04011434	GCA_001316895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/895/GCA_001316895.2_v02	-	ST2016:951362657
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.18794	28.2	-	FURT01	27	3915	3768	2/14/17	2/23/17	Scaffold	SC	SAMEA3375033	GCA_900165745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/745/GCA_900165745.1_16852_2_61	-	VRECD0065
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.72935	50.5	-	FUAO01	428	5341	4493	1/28/17	2/26/17	Scaffold	SC	SAMEA1569682	GCA_900159715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/715/GCA_900159715.1_8403_8_1	-	sh1385
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	1.99035	41.4	-	FIFS01	33	1993	1847	2/10/16	3/19/17	Scaffold	SC	SAMEA1316705	GCA_900062235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/235/GCA_900062235.1_7114_5_18	-	LSS18
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.10657	39.1	-	JWWH03	227	4022	3874	12/29/14	3/18/17	Contig	JCVI	SAMN03084793	GCA_000810185.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/185/GCA_000810185.3_ASM81018v3	-	UH71_279
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.94829	65.9	-	LLQQ01	142	6730	6489	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128629	GCA_001451965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/965/GCA_001451965.1_WH-SGI-V-07619	26604259	WH-SGI-V-07619
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.9867	39.7	-	COBG02	94	2189	1978	3/23/15	3/11/17	Contig	SC	SAMEA1463300	GCA_001126605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/605/GCA_001126605.2_7622_2_40	-	BR1113
Escherichia coli HVH 162 (4-5627982)	1281095	PRJNA186194	186194	Proteobacteria	Gammaproteobacteria	5.32424	50.6	-	AVXV01	26	5465	5091	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885807	GCA_000458455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/455/GCA_000458455.1_Esch_coli_HVH_162_4-5627982_V1	-	HVH 162 (4-5627982)
Mycobacterium tuberculosis 94_M4241A	515615	PRJNA238927	238927	Terrabacteria group	Actinobacteria	4.39773	65.5	-	JLCT01	54	4298	4099	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02400335	GCA_000665965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/965/GCA_000665965.1_Myco_tube_94_M4241A_V1	-	94_M4241A
Listeria monocytogenes	1639	PRJNA377767	377767	Terrabacteria group	Firmicutes	2.89947	37.9	-	NAUL01	32	2920	2820	4/28/17	5/3/17	Contig	Queensland Health	SAMN06472821	GCA_002114765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/765/GCA_002114765.1_ASM211476v1	-	FRR B 2946
Campylobacter jejuni	197	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.60139	30.5	-	CYRT01	128	1703	1542	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487084	GCA_001291585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/585/GCA_001291585.1_RC507_S48contigs.fa	-	RC507
Salmonella enterica subsp. enterica serovar Heidelberg str. N29341	1128962	PRJNA80519	80519	Proteobacteria	Gammaproteobacteria	4.91406	52.1	-	AMNJ01	91	5073	4782	3/27/14	2/26/17	Contig	FDA	SAMN01088016	GCA_000603685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/685/GCA_000603685.1_ASM60368v1	24732280	N29341
Staphylococcus aureus M0830	1388607	PRJNA216780	216780	Terrabacteria group	Firmicutes	2.88247	32.8	-	JCPT01	50	3037	2863	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325731	GCA_000544225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/225/GCA_000544225.1_Stap_aure_M0830_V1	-	M0830
Staphylococcus aureus M0833	1388609	PRJNA216782	216782	Terrabacteria group	Firmicutes	2.92058	32.7	-	JCPU01	67	3090	2952	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325733	GCA_000544245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/245/GCA_000544245.1_Stap_aure_M0833_V1	-	M0833
Salmonella enterica subsp. enterica serovar Heidelberg str. N30678	1128964	PRJNA80523	80523	Proteobacteria	Gammaproteobacteria	5.13352	51.8	-	AMNK01	127	5321	4997	3/27/14	2/26/17	Contig	FDA	SAMN01088017	GCA_000603705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/705/GCA_000603705.1_ASM60370v1	24732280	N30678
Campylobacter jejuni	197	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.79986	31	-	CYQS01	198	1891	1727	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487059	GCA_001291625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/625/GCA_001291625.1_RC186_S23contigs.fa	-	RC186
Listeria monocytogenes	1639	PRJNA377767	377767	Terrabacteria group	Firmicutes	3.03672	37.9	-	NAUN01	17	3122	3033	4/28/17	5/3/17	Contig	Queensland Health	SAMN06472819	GCA_002114785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/785/GCA_002114785.1_ASM211478v1	-	FRR B 2884
Mycobacterium tuberculosis T46	611302	PRJNA238928	238928	Terrabacteria group	Actinobacteria	4.36357	65.6	-	JLCS01	49	4294	4105	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02400336	GCA_000665985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/665/985/GCA_000665985.1_Myco_tube_T46_V1	-	T46
Escherichia coli HVH 163 (4-4697553)	1281096	PRJNA186195	186195	Proteobacteria	Gammaproteobacteria	5.39301	50.6	-	AVXW01	9	5657	5343	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885808	GCA_000458475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/475/GCA_000458475.1_Esch_coli_HVH_163_4-4697553_V1	-	HVH 163 (4-4697553)
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.09934	39.5	-	CLRI01	55	2308	2091	3/21/15	3/4/17	Contig	SC	SAMEA1029006	GCA_001126685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/685/GCA_001126685.1_6972_2_21	-	SMRU2565
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.88083	65.9	-	LLRL01	173	6665	6402	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128650	GCA_001452205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/205/GCA_001452205.1_WH-SGI-V-07640	26604259	WH-SGI-V-07640
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.85243	39	-	JWWG03	218	3751	3597	12/29/14	3/18/17	Contig	JCVI	SAMN03084794	GCA_000810205.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/205/GCA_000810205.3_Velvet_assembly_of_Acinetobacter_baumannii_UH514_287	-	UH514_287
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.36056	41.4	-	FIIX01	118	2350	2183	2/10/16	3/19/17	Scaffold	SC	SAMEA1316679	GCA_900062835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/835/GCA_900062835.1_7054_7_3	-	LSS99
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.572	50.8	-	FUAP01	391	5122	4357	1/28/17	2/26/17	Scaffold	SC	SAMEA1569688	GCA_900159725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/725/GCA_900159725.1_8403_8_2	-	sh1386
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.23926	28.9	-	FURU01	36	4062	3869	2/14/17	2/23/17	Scaffold	SC	SAMEA3375034	GCA_900165755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/755/GCA_900165755.1_16852_2_62	-	VRECD0070
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.86418	57	-	LJEF02	199	5998	5642	10/15/15	2/21/17	Contig	University of KwaZulu Natal	SAMN04011440	GCA_001316925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/925/GCA_001316925.2_21_S12v02	-	ST2017:950117510
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.12552	64.1	-	FSIT01	25	5156	5031	12/14/16	3/21/17	Scaffold	SC	SAMEA2070911	GCA_900136435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/435/GCA_900136435.1_10208_3_66	-	491
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.13775	64.1	-	FSIU01	23	5189	5028	12/14/16	3/21/17	Scaffold	SC	SAMEA2070912	GCA_900136475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/475/GCA_900136475.1_10208_3_69	-	494
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.85203	57	-	LJEG02	172	5972	5621	10/15/15	2/21/17	Contig	University of KwaZulu Natal	SAMN04011439	GCA_001316945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/945/GCA_001316945.2_20_S11v02	-	ST2017:950142398
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.2378	28.9	-	FURV01	42	4033	3860	2/14/17	2/23/17	Scaffold	SC	SAMEA3375035	GCA_900165765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/765/GCA_900165765.1_16852_2_63	-	VRECD0071
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.66336	50.7	-	FUAR01	389	5218	4446	1/28/17	2/26/17	Scaffold	SC	SAMEA1569653	GCA_900159735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/735/GCA_900159735.1_8403_8_3	-	sh1387
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.45035	41.4	-	FIGJ01	79	2456	2277	2/10/16	3/19/17	Scaffold	SC	SAMEA1316711	GCA_900063575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/575/GCA_900063575.1_7114_5_32	-	LSS32
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.04225	39	-	JWVY01	151	-	-	-	-	Contig	JCVI	SAMN03084804	GCA_000810225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/225/GCA_000810225.1_ASM81022v1	-	UH484_311
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.89645	65.9	-	LLRM01	150	6667	6407	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128651	GCA_001452215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/215/GCA_001452215.1_WH-SGI-V-07641	26604259	WH-SGI-V-07641
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.17317	39.5	-	CLCN01	40	2414	2167	3/21/15	3/4/17	Contig	SC	SAMEA1026166	GCA_001126765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/765/GCA_001126765.1_6871_2_5	-	SMRU1829
Escherichia coli HVH 164 (4-5953081)	1281097	PRJNA186196	186196	Proteobacteria	Gammaproteobacteria	4.68449	50.7	-	AVXX01	8	4761	4461	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885809	GCA_000458495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/495/GCA_000458495.1_Esch_coli_HVH_164_4-5953081_V1	-	HVH 164 (4-5953081)
Mycobacterium tuberculosis GM 1503	537209	PRJNA238929	238929	Terrabacteria group	Actinobacteria	4.4212	65.6	-	JLCR01	68	4339	4097	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02400337	GCA_000666005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/005/GCA_000666005.1_Myco_tube_GM_1503_V1	-	GM 1503
Listeria monocytogenes	1639	PRJNA377767	377767	Terrabacteria group	Firmicutes	2.93582	37.9	-	NAUM01	33	2985	2879	4/28/17	5/3/17	Contig	Queensland Health	SAMN06472820	GCA_002114795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/795/GCA_002114795.1_ASM211479v1	-	FRR B 2942
Campylobacter jejuni	197	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.79885	31	-	CYQG01	248	1913	1715	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487045	GCA_001291645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/645/GCA_001291645.1_RC039_S9contigs.fa	-	RC039
Salmonella enterica subsp. enterica serovar Heidelberg str. 32507	1128965	PRJNA80525	80525	Proteobacteria	Gammaproteobacteria	4.98633	51.9	-	AMNL01	102	5117	4801	3/27/14	2/26/17	Contig	FDA	SAMN01088018	GCA_000603725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/725/GCA_000603725.1_ASM60372v1	24732280	32507
Staphylococcus aureus M0834	1388610	PRJNA216783	216783	Terrabacteria group	Firmicutes	2.86549	32.8	-	JCPV01	73	3019	2835	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325734	GCA_000544265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/265/GCA_000544265.1_Stap_aure_M0834_V1	-	M0834
Staphylococcus aureus M0836	1388611	PRJNA216784	216784	Terrabacteria group	Firmicutes	2.88788	32.8	-	JCPW01	59	3062	2891	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325735	GCA_000544285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/285/GCA_000544285.1_Stap_aure_M0836_V1	-	M0836
Salmonella enterica subsp. enterica serovar Heidelberg str. N20134	1124944	PRJNA78493	78493	Proteobacteria	Gammaproteobacteria	4.86103	52.2	-	AMNN01	132	5027	4606	3/27/14	2/26/17	Contig	FDA	SAMN01088020	GCA_000603765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/765/GCA_000603765.1_ASM60376v1	24732280	N20134
Campylobacter jejuni	197	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.80424	31.1	-	CYQR01	84	1876	1738	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487057	GCA_001291685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/685/GCA_001291685.1_RC179_S21contigs.fa	-	RC179
Listeria monocytogenes	1639	PRJNA377767	377767	Terrabacteria group	Firmicutes	2.96387	37.8	-	NAUO01	16	3026	2936	4/28/17	5/3/17	Contig	Queensland Health	SAMN06472818	GCA_002114825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/825/GCA_002114825.1_ASM211482v1	-	FRR B 2944
Mycobacterium tuberculosis	1773	PRJNA240156	240156	Terrabacteria group	Actinobacteria	4.4255	65.6	-	JKXT01	3	4288	4114	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02673323	GCA_000666025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/025/GCA_000666025.1_Myco_tube_MAL010075_V1	-	MAL010075
Escherichia coli HVH 167 (4-6073565)	1281098	PRJNA186197	186197	Proteobacteria	Gammaproteobacteria	5.25096	50.7	-	AVXY01	5	5440	5112	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885810	GCA_000458515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/515/GCA_000458515.1_Esch_coli_HVH_167_4-6073565_V1	-	HVH 167 (4-6073565)
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1065	39.7	-	CLCU01	73	2249	1978	3/21/15	3/6/17	Contig	SC	SAMEA1025829	GCA_001126845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/845/GCA_001126845.1_6899_4_16	-	SMRU2032
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.0568	66	-	LLRN01	119	6872	6660	11/30/15	3/24/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128652	GCA_001452235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/235/GCA_001452235.1_WH-SGI-V-07642	26604259	WH-SGI-V-07642
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.04836	38.9	-	JWVX03	124	3935	3804	12/29/14	3/18/17	Contig	JCVI	SAMN03084805	GCA_000810245.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/245/GCA_000810245.3_ASM81024v3	-	UH299_338
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.24764	41	-	FIMD01	45	2273	2097	2/10/16	3/19/17	Scaffold	SC	SAMEA1316597	GCA_900064025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/025/GCA_900064025.1_7054_7_78	-	SS999
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.6542	50.8	-	FUAS01	375	5238	4466	1/28/17	3/2/17	Scaffold	SC	SAMEA1569670	GCA_900159755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/755/GCA_900159755.1_8403_8_5	-	sh1389
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.18696	28.2	-	FURW01	30	3905	3762	2/14/17	2/23/17	Scaffold	SC	SAMEA3375036	GCA_900165775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/775/GCA_900165775.1_16852_2_64	-	VRECD0072
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.73155	57	-	LJEI02	184	5827	5487	10/15/15	2/21/17	Contig	University of KwaZulu Natal	SAMN04011442	GCA_001316955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/955/GCA_001316955.2_v02	-	ST101:957083896
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16796	64.1	-	FVNG01	22	5211	5053	3/10/17	3/18/17	Scaffold	SC	SAMEA2071622	GCA_900136525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/525/GCA_900136525.1_10208_3_71	-	496
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16578	64.1	-	FVNH01	28	5203	5096	3/10/17	3/18/17	Scaffold	SC	SAMEA2069318	GCA_900136585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/585/GCA_900136585.1_10208_3_82	-	507
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.60326	57.2	-	LJEJ02	131	5689	5381	10/15/15	2/21/17	Contig	University of KwaZulu Natal	SAMN04011443	GCA_001316985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/985/GCA_001316985.2_32_S15v02	-	ST101:951384356
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.21898	28.7	-	FURY01	25	3941	3749	2/14/17	2/23/17	Scaffold	SC	SAMEA3375048	GCA_900165785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/785/GCA_900165785.1_16852_2_76	-	VRECD0091
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.66803	50.8	-	FUAT01	372	5272	4462	1/28/17	2/26/17	Scaffold	SC	SAMEA1569738	GCA_900159765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/765/GCA_900159765.1_8403_8_6	-	sh1390
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.03165	41.2	-	FILC01	28	2028	1918	2/10/16	3/19/17	Scaffold	SC	SAMEA1316666	GCA_900065045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/045/GCA_900065045.1_7054_7_59	-	SS1070
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.062	39	-	JWVW03	212	3972	3823	12/29/14	3/18/17	Contig	JCVI	SAMN03084806	GCA_000810265.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/265/GCA_000810265.3_ASM81026v3	-	UH299_341
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.68811	66.2	-	LLRO01	110	6416	6226	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128653	GCA_001452255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/255/GCA_001452255.1_WH-SGI-V-07643	26604259	WH-SGI-V-07643
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00515	39.7	-	CNYB02	193	2158	1981	3/23/15	3/11/17	Contig	SC	SAMEA1463177	GCA_001126945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/945/GCA_001126945.2_7553_4_24	-	ND6151
Escherichia coli HVH 169 (4-1075578)	1281099	PRJNA186198	186198	Proteobacteria	Gammaproteobacteria	5.19956	50.4	-	AVXZ01	13	5306	4963	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885811	GCA_000458535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/535/GCA_000458535.1_Esch_coli_HVH_169_4-1075578_V1	-	HVH 169 (4-1075578)
Mycobacterium tuberculosis	1773	PRJNA240157	240157	Terrabacteria group	Actinobacteria	4.42736	65.6	-	JKXS01	8	4296	4120	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02673324	GCA_000666045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/045/GCA_000666045.1_Myco_tube_MAL010077_V1	-	MAL010077
Listeria monocytogenes	1639	PRJNA377767	377767	Terrabacteria group	Firmicutes	2.96464	37.8	-	NAUP01	13	3025	2937	4/28/17	5/3/17	Contig	Queensland Health	SAMN06472817	GCA_002114845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/845/GCA_002114845.1_ASM211484v1	-	FRR B 2941
Campylobacter jejuni	197	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.76122	31.1	-	CYQV01	186	1814	1694	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487060	GCA_001291705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/705/GCA_001291705.1_RC185_S24contigs.fa	-	RC185
Salmonella enterica subsp. enterica serovar Heidelberg str. CVM24391	1124945	PRJNA78495	78495	Proteobacteria	Gammaproteobacteria	4.86342	52.2	-	AMNO01	88	5009	4709	3/27/14	2/26/17	Contig	FDA	SAMN01088021	GCA_000603785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/785/GCA_000603785.1_ASM60378v1	24732280	CVM24391
Staphylococcus aureus M0837	1388612	PRJNA216785	216785	Terrabacteria group	Firmicutes	2.85148	32.8	-	JCPX01	47	3000	2839	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325736	GCA_000544305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/305/GCA_000544305.1_Stap_aure_M0837_V1	-	M0837
Staphylococcus aureus M0838	1388613	PRJNA216786	216786	Terrabacteria group	Firmicutes	2.88354	32.8	-	JCPY01	48	3034	2876	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325737	GCA_000544325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/325/GCA_000544325.1_Stap_aure_M0838_V1	-	M0838
Salmonella enterica subsp. enterica serovar Heidelberg str. CVM24359	1124946	PRJNA78497	78497	Proteobacteria	Gammaproteobacteria	5.07973	51.9	-	AMNP01	238	5308	4847	3/27/14	2/26/17	Contig	FDA	SAMN01088022	GCA_000603805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/805/GCA_000603805.1_ASM60380v1	24732280	CVM24359
Campylobacter jejuni	197	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.70908	30.2	-	CYQY01	140	1799	1644	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487065	GCA_001291805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/805/GCA_001291805.1_RC270_S29contigs.fa	-	RC270
Listeria monocytogenes	1639	PRJNA377767	377767	Terrabacteria group	Firmicutes	3.03358	37.9	-	NAUQ01	29	3078	2975	4/28/17	5/3/17	Contig	Queensland Health	SAMN06472816	GCA_002114855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/855/GCA_002114855.1_ASM211485v1	-	FRR B 2982
Mycobacterium tuberculosis	1773	PRJNA240159	240159	Terrabacteria group	Actinobacteria	4.40957	65.5	-	JKXQ01	15	4299	4109	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02673326	GCA_000666085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/085/GCA_000666085.1_Myco_tube_MAL010119_V1	-	MAL010119
Escherichia coli HVH 170 (4-3026949)	1281100	PRJNA186199	186199	Proteobacteria	Gammaproteobacteria	5.66364	50.6	-	AVYA01	13	5866	5453	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885812	GCA_000458555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/555/GCA_000458555.1_Esch_coli_HVH_170_4-3026949_V1	-	HVH 170 (4-3026949)
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.02765	39.7	-	CMHP01	54	2225	2006	3/22/15	3/4/17	Contig	SC	SAMEA1029310	GCA_001126985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/985/GCA_001126985.1_7038_6_1	-	SMRU2977
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.91564	66	-	LLRP01	126	6730	6497	11/30/15	3/24/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128654	GCA_001452285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/285/GCA_001452285.1_WH-SGI-V-07644	26604259	WH-SGI-V-07644
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.14869	39	-	JWVV03	207	4071	3905	12/29/14	3/18/17	Contig	JCVI	SAMN03084807	GCA_000810285.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/285/GCA_000810285.3_ASM81028v3	-	UH299_342
Streptococcus suis	1307	PRJEB2351	203858	Terrabacteria group	Firmicutes	2.04169	41.1	-	FIFD01	23	2046	1941	2/10/16	3/19/17	Scaffold	SC	SAMEA1316598	GCA_900065705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/705/GCA_900065705.1_5749_1_3	-	LOLA-SS003
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.5653	50.8	-	FUAU01	380	5126	4354	1/28/17	2/26/17	Scaffold	SC	SAMEA1569752	GCA_900159775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/775/GCA_900159775.1_8403_8_7	-	sh1391
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.20309	28.3	-	FURZ01	28	3947	3788	2/14/17	2/23/17	Scaffold	SC	SAMEA3375050	GCA_900165805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/805/GCA_900165805.1_16852_2_78	-	VRECD0094
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.74653	57	-	LJEK02	132	5831	5505	10/15/15	2/21/17	Contig	University of KwaZulu Natal	SAMN04011444	GCA_001317005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/005/GCA_001317005.2_34_S16v02	-	ST101:957089165
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.37294	64.1	-	FVNL01	27	5453	5266	3/10/17	3/18/17	Scaffold	SC	SAMEA2070595	GCA_900136595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/595/GCA_900136595.1_10625_4_30	-	30
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.5721	63.9	-	FVNJ01	35	5754	5529	3/10/17	3/18/17	Scaffold	SC	SAMEA2070161	GCA_900136615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/615/GCA_900136615.1_10625_4_32	-	32
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.73456	57	-	LJEL02	165	5829	5503	10/15/15	2/21/17	Contig	University of KwaZulu Natal	SAMN04011445	GCA_001317015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/015/GCA_001317015.2_35_S17v02	-	ST101:957083320
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.25803	29.1	-	FUSA01	35	4024	3850	2/14/17	2/23/17	Scaffold	SC	SAMEA3375051	GCA_900165815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/815/GCA_900165815.1_16852_2_79	-	VRECD0096
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.56916	50.8	-	FUAW01	381	5134	4347	1/28/17	2/26/17	Scaffold	SC	SAMEA1569711	GCA_900159795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/795/GCA_900159795.1_8403_8_9	-	sh1393
Candidatus Sulcia muelleri	336810	PRJNA300486	300486	FCB group	Bacteroidetes/Chlorobi group	0.190657	24	chromosome:NZ_CP013212.1/CP013212.1	-	1	224	181	11/24/15	4/4/17	Complete Genome	University of Hawaii at Manoa	SAMN04223556	GCA_001447915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/447/915/GCA_001447915.1_ASM144791v1	26798106	PUNC
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.93722	39.1	-	JWVU03	215	3841	3657	12/29/14	3/18/17	Contig	JCVI	SAMN03084808	GCA_000810305.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/305/GCA_000810305.3_ASM81030v3	-	UH189_348
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.68869	66.1	-	LLRQ01	120	6419	6208	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128655	GCA_001452305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/305/GCA_001452305.1_WH-SGI-V-07645	26604259	WH-SGI-V-07645
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04286	39.7	-	CKRS01	36	2228	1988	3/21/15	3/6/17	Contig	SC	SAMEA1023953	GCA_001127045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/045/GCA_001127045.1_6680_8_15	-	SMRU207
Escherichia coli HVH 171 (4-3191958)	1281101	PRJNA186200	186200	Proteobacteria	Gammaproteobacteria	5.18462	50.4	-	AVYB01	15	5292	4953	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885813	GCA_000458575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/575/GCA_000458575.1_Esch_coli_HVH_171_4-3191958_V1	-	HVH 171 (4-3191958)
Mycobacterium tuberculosis	1773	PRJNA240160	240160	Terrabacteria group	Actinobacteria	4.41929	65.6	-	JKXP01	7	4284	4119	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02673327	GCA_000666105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/105/GCA_000666105.1_Myco_tube_MAL020139_V1	-	MAL020139
Listeria monocytogenes	1639	PRJNA377767	377767	Terrabacteria group	Firmicutes	3.03481	37.9	-	NAUR01	24	3069	2977	4/28/17	5/3/17	Contig	Queensland Health	SAMN06472815	GCA_002114885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/885/GCA_002114885.1_ASM211488v1	-	FRR B 2976
Campylobacter jejuni	197	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.6522	30.4	-	CYPY01	144	1742	1583	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487038	GCA_001291825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/825/GCA_001291825.1_RC009_S2contigs.fa	-	RC009
Salmonella enterica subsp. enterica serovar Heidelberg str. CVM24388	1124947	PRJNA78499	78499	Proteobacteria	Gammaproteobacteria	4.76531	52.2	-	AMNQ01	163	4948	4498	3/27/14	2/26/17	Contig	FDA	SAMN01088023	GCA_000603825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/825/GCA_000603825.1_ASM60382v1	24732280	CVM24388
Staphylococcus aureus M0839	1388614	PRJNA216787	216787	Terrabacteria group	Firmicutes	2.86148	32.8	-	JCPZ01	64	3004	2861	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325738	GCA_000544345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/345/GCA_000544345.1_Stap_aure_M0839_V1	-	M0839
Staphylococcus aureus M0840	1388615	PRJNA216788	216788	Terrabacteria group	Firmicutes	2.89387	32.8	-	JCQA01	49	3055	2871	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325739	GCA_000544365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/365/GCA_000544365.1_Stap_aure_M0840_V1	-	M0840
Salmonella enterica subsp. enterica serovar Heidelberg str. CVM20752	1124948	PRJNA78501	78501	Proteobacteria	Gammaproteobacteria	4.9868	51.8	-	AMNR01	132	5151	4738	3/27/14	2/26/17	Contig	FDA	SAMN01088024	GCA_000603845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/845/GCA_000603845.1_ASM60384v1	24732280	CVM20752
Campylobacter jejuni	197	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.6244	30.5	-	CYRQ01	140	1723	1571	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487082	GCA_001291925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/925/GCA_001291925.1_RC429_S46contigs.fa	-	RC429
Listeria monocytogenes	1639	PRJNA377767	377767	Terrabacteria group	Firmicutes	3.07774	37.9	-	NAUS01	30	3136	3028	4/28/17	5/3/17	Contig	Queensland Health	SAMN06472814	GCA_002114905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/905/GCA_002114905.1_ASM211490v1	-	FRR B 2975
Mycobacterium tuberculosis	1773	PRJNA240162	240162	Terrabacteria group	Actinobacteria	4.41375	65.5	-	JKXN01	14	4303	4103	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02673329	GCA_000666145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/145/GCA_000666145.1_Myco_tube_MAL020151_V1	-	MAL020151
Escherichia coli HVH 172 (4-3248542)	1281102	PRJNA186201	186201	Proteobacteria	Gammaproteobacteria	5.3953	50.4	-	AVYC01	17	5501	5096	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885814	GCA_000458605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/605/GCA_000458605.1_Esch_coli_HVH_172_4-3248542_V1	-	HVH 172 (4-3248542)
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08384	39.7	-	CLBM01	66	2309	2087	3/21/15	3/4/17	Contig	SC	SAMEA1025868	GCA_001127085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/085/GCA_001127085.1_6871_1_17	-	SMRU1793
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.11908	65.8	-	LLRS01	163	6869	6568	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128657	GCA_001452325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/325/GCA_001452325.1_WH-SGI-V-07647	26604259	WH-SGI-V-07647
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.97481	39.1	-	JWVT03	252	3917	3687	12/29/14	3/18/17	Contig	JCVI	SAMN03084809	GCA_000810325.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/325/GCA_000810325.3_ASM81032v3	-	UH189_349
Mycoplasma mycoides subsp. mycoides	2103	PRJNA266092	266092	Terrabacteria group	Tenericutes	1.1925	24	chromosome:NZ_CP010267.1/CP010267.1	-	1	1140	1015	12/11/14	4/2/17	Complete Genome	IZSAM	SAMN03162163	GCA_000800785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/785/GCA_000800785.1_ASM80078v1	25814605	izsam_mm5713
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.56305	50.8	-	FUAX01	376	5024	4343	1/28/17	2/26/17	Scaffold	SC	SAMEA1569751	GCA_900159805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/805/GCA_900159805.1_8403_8_10	-	sh1394
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.21911	28.4	-	FUSC01	32	3947	3765	2/14/17	2/23/17	Scaffold	SC	SAMEA3375052	GCA_900165825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/825/GCA_900165825.1_16852_2_80	-	VRECD0097
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.72779	57	-	LJEN02	134	5818	5483	10/15/15	2/21/17	Contig	University of KwaZulu Natal	SAMN04011447	GCA_001317035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/035/GCA_001317035.2_38_S19v.02	-	ST101:U44822 (26/7/13)
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.03501	64.2	-	FSJC01	12	5012	4882	12/14/16	3/21/17	Scaffold	SC	SAMEA2071184	GCA_900136625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/625/GCA_900136625.1_10625_4_31	-	31
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.22726	64.2	-	FSJD01	59	5232	5070	12/14/16	3/21/17	Scaffold	SC	SAMEA2071231	GCA_900136645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/645/GCA_900136645.1_10625_5_12	-	97
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.97813	57.1	-	LJEQ01	433	6095	5658	10/15/15	2/21/17	Contig	University of KwaZulu Natal	SAMN04011450	GCA_001317095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/095/GCA_001317095.1_ASM131709v1	-	ST1478:939997103
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.29092	28.8	-	FUSB01	38	4043	3869	2/14/17	2/23/17	Scaffold	SC	SAMEA3375053	GCA_900165835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/835/GCA_900165835.1_16852_2_81	-	VRECD0098
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.64935	50.8	-	FUAY01	381	5221	4439	1/28/17	2/26/17	Scaffold	SC	SAMEA1569705	GCA_900159815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/815/GCA_900159815.1_8403_8_11	-	sh1395
Candidatus Sulcia muelleri str. Sulcia-ALF	1343076	PRJNA206992	206992	FCB group	Bacteroidetes/Chlorobi group	0.190733	24	chromosome:CP006060.1	-	1	225	188	8/1/13	2/14/14	Complete Genome	Yale	SAMN02641652	GCA_000442635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/635/GCA_000442635.1_ASM44263v1	-	ALF
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.9463	39.1	-	JWVS03	207	3844	3658	12/29/14	3/18/17	Contig	JCVI	SAMN03084810	GCA_000810345.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/345/GCA_000810345.3_ASM81034v3	-	UH189_355
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.27244	66.5	-	LLRU01	89	5913	5766	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128659	GCA_001452335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/335/GCA_001452335.1_WH-SGI-V-07649	26604259	WH-SGI-V-07649
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09808	39.6	-	CNXK02	135	2281	2069	3/23/15	3/5/17	Contig	SC	SAMEA1032598	GCA_001127145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/145/GCA_001127145.2_7001_3_2	-	R34-3136
Escherichia coli HVH 173 (3-9175482)	1281103	PRJNA186202	186202	Proteobacteria	Gammaproteobacteria	5.34565	50.6	-	AVYD01	9	5583	5248	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885815	GCA_000458625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/625/GCA_000458625.1_Esch_coli_HVH_173_3-9175482_V1	-	HVH 173 (3-9175482)
Mycobacterium tuberculosis	1773	PRJNA240163	240163	Terrabacteria group	Actinobacteria	4.4119	65.5	-	JKXM01	27	4299	4098	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02673330	GCA_000666165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/165/GCA_000666165.1_Myco_tube_MAL020165_V1	-	MAL020165
Listeria monocytogenes	1639	PRJNA377767	377767	Terrabacteria group	Firmicutes	3.05775	37.9	-	NAUT01	31	3113	3016	4/28/17	5/3/17	Contig	Queensland Health	SAMN06472813	GCA_002114915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/915/GCA_002114915.1_ASM211491v1	-	FRR B 2972
Campylobacter jejuni	197	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.80496	31	-	CYRS01	121	1873	1732	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487085	GCA_001291945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/945/GCA_001291945.1_RC508_S49contigs.fa	-	RC508
Salmonella enterica subsp. enterica serovar Heidelberg str. N18413	1128967	PRJNA80529	80529	Proteobacteria	Gammaproteobacteria	4.878	52.1	-	AMNS01	169	5055	4735	3/27/14	2/26/17	Contig	FDA	SAMN01088025	GCA_000603865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/865/GCA_000603865.1_ASM60386v1	24732280	N18413
Staphylococcus aureus M0841	1388616	PRJNA216789	216789	Terrabacteria group	Firmicutes	2.88947	32.8	-	JCQB01	43	3043	2884	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325740	GCA_000544385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/385/GCA_000544385.1_Stap_aure_M0841_V1	-	M0841
Staphylococcus aureus M0842	1388617	PRJNA216790	216790	Terrabacteria group	Firmicutes	2.88487	32.8	-	JCQC01	40	3041	2881	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325741	GCA_000544405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/405/GCA_000544405.1_Stap_aure_M0842_V1	-	M0842
Salmonella enterica subsp. enterica serovar Heidelberg str. N18440	1128968	PRJNA80531	80531	Proteobacteria	Gammaproteobacteria	4.92786	52.1	-	AMNT01	209	5078	4771	3/27/14	2/26/17	Contig	FDA	SAMN01088026	GCA_000603885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/885/GCA_000603885.1_ASM60388v1	24732280	N18440
Campylobacter jejuni	197	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.68235	30.3	-	CYRV01	142	1782	1622	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487088	GCA_001291965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/965/GCA_001291965.1_12502_S52contigs.fa	-	12502
Listeria monocytogenes	1639	PRJNA377767	377767	Terrabacteria group	Firmicutes	3.00124	37.9	-	NAUU01	23	3026	2929	4/28/17	5/3/17	Contig	Queensland Health	SAMN06472812	GCA_002114945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/945/GCA_002114945.1_ASM211494v1	-	FRR B 2971
Mycobacterium tuberculosis MAL010078	1354143	PRJNA211634	211634	Terrabacteria group	Actinobacteria	4.42338	65.5	-	JLAW01	2	4283	4112	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231103	GCA_000666245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/245/GCA_000666245.1_Myco_tube_MAL010078_V1	-	MAL010078
Escherichia coli HVH 175 (4-3405184)	1281104	PRJNA186203	186203	Proteobacteria	Gammaproteobacteria	5.49079	50.6	-	AVYE01	21	5753	5377	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885816	GCA_000458645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/645/GCA_000458645.1_Esch_coli_HVH_175_4-3405184_V1	-	HVH 175 (4-3405184)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00649	39.7	-	COBA02	131	2178	1973	3/23/15	3/11/17	Contig	SC	SAMEA1463113	GCA_001127205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/205/GCA_001127205.2_7622_2_33	-	BR1101
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.08257	65.8	-	LLRW01	134	6841	6577	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128661	GCA_001452365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/365/GCA_001452365.1_WH-SGI-V-07651	26604259	WH-SGI-V-07651
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.98449	39	-	JWVR03	126	3860	3725	12/29/14	3/18/17	Contig	JCVI	SAMN03084812	GCA_000810365.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/365/GCA_000810365.3_ASM81036v3	-	UH81_364
Streptococcus suis YS57	1214210	PRJNA171473	171473	Terrabacteria group	Firmicutes	2.51791	41.2	-	ALMZ01	141	-	-	7/25/13	1/9/14	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02469548	GCA_000440135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/135/GCA_000440135.1_version1	-	YS57
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.70739	50.5	-	FUBB01	427	5291	4464	1/28/17	2/26/17	Scaffold	SC	SAMEA1569726	GCA_900159825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/825/GCA_900159825.1_8403_8_12	-	sh1396
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.20075	28.6	-	FUSD01	33	3975	3784	2/14/17	2/23/17	Scaffold	SC	SAMEA3375062	GCA_900165845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/845/GCA_900165845.1_16852_2_90	-	VRECD0107
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.74908	57	-	LJEU02	152	5837	5505	10/15/15	2/21/17	Contig	University of KwaZulu Natal	SAMN04011454	GCA_001317165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/165/GCA_001317165.2_52_S26v.02	-	ST101:939996824
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.4257	64	-	FSJE01	67	5541	5319	12/14/16	4/2/17	Scaffold	SC	SAMEA2070299	GCA_900136675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/675/GCA_900136675.1_10625_5_13	-	98
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.19733	64.2	-	FSJG01	22	5251	5111	12/14/16	3/21/17	Scaffold	SC	SAMEA2071235	GCA_900136705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/705/GCA_900136705.1_10625_5_24	-	109
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.73568	57	-	LJFE02	236	5847	5475	10/15/15	2/21/17	Contig	University of KwaZulu Natal	SAMN04011455	GCA_001317295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/295/GCA_001317295.2_53_S27v.02	-	ST101:951363981
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.10155	28.3	-	FUSE01	28	3821	3651	2/14/17	2/23/17	Scaffold	SC	SAMEA3375063	GCA_900165855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/855/GCA_900165855.1_16852_2_91	-	VRECD0108
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.75406	50.5	-	FUBA01	414	5385	4530	1/28/17	2/26/17	Scaffold	SC	SAMEA1569678	GCA_900159835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/835/GCA_900159835.1_8403_8_13	-	sh1397
Streptococcus suis 10581	1214158	PRJNA171410	171410	Terrabacteria group	Firmicutes	2.47816	41.1	-	ALKQ01	100	-	-	7/25/13	1/8/14	Contig	"National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention/State Key Laboratory for Infectious Disease Prevention and Control"	SAMN02470640	GCA_000440235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/440/235/GCA_000440235.1_version1	-	10581
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.02572	39	-	JWVQ03	181	3913	3779	12/29/14	3/18/17	Contig	JCVI	SAMN03084813	GCA_000810385.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/385/GCA_000810385.3_ASM81038v3	-	UH81_366
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.01159	66	-	LLRX01	126	6773	6551	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128662	GCA_001452385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/385/GCA_001452385.1_WH-SGI-V-07652	26604259	WH-SGI-V-07652
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09494	39.6	-	COEG02	169	2271	2060	3/22/15	3/5/17	Contig	SC	SAMEA1463230	GCA_001127245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/245/GCA_001127245.2_7622_4_44	-	MD5021
Escherichia coli HVH 176 (4-3428664)	1281105	PRJNA186204	186204	Proteobacteria	Gammaproteobacteria	5.32695	50.8	-	AVYF01	13	5547	5195	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885817	GCA_000458665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/665/GCA_000458665.1_Esch_coli_HVH_176_4-3428664_V1	-	HVH 176 (4-3428664)
Mycobacterium tuberculosis MAL010079	1354165	PRJNA211635	211635	Terrabacteria group	Actinobacteria	4.41992	65.6	-	JLAV01	5	4289	4111	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231104	GCA_000666265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/265/GCA_000666265.1_Myco_afri_MAL010079_V1	-	MAL010079
Listeria monocytogenes	1639	PRJNA377767	377767	Terrabacteria group	Firmicutes	2.92501	37.9	-	NAUV01	17	2956	2871	4/28/17	5/3/17	Contig	Queensland Health	SAMN06472811	GCA_002114965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/965/GCA_002114965.1_ASM211496v1	-	FRR B 2947
Campylobacter jejuni	197	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.74971	30.2	-	CYQQ01	177	1864	1704	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487056	GCA_001292025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/025/GCA_001292025.1_RC169_S20contigs.fa	-	RC169
Salmonella enterica subsp. enterica serovar Heidelberg str. N18453	1128969	PRJNA80533	80533	Proteobacteria	Gammaproteobacteria	4.87448	52.1	-	AMNU01	202	5073	4705	3/27/14	2/26/17	Contig	FDA	SAMN01088027	GCA_000603905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/905/GCA_000603905.1_ASM60390v1	24732280	N18453
Staphylococcus aureus M0843	1388618	PRJNA216791	216791	Terrabacteria group	Firmicutes	2.8882	32.8	-	JCQD01	31	3061	2889	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325742	GCA_000544425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/425/GCA_000544425.1_Stap_aure_M0843_V1	-	M0843
Staphylococcus aureus M0845	1388619	PRJNA216792	216792	Terrabacteria group	Firmicutes	2.8731	32.8	-	JCQE01	41	3033	2857	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325743	GCA_000544445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/445/GCA_000544445.1_Stap_aure_M0845_V1	-	M0845
Salmonella enterica subsp. enterica serovar Aqua str. NVSL2001	1302616	PRJNA192256	192256	Proteobacteria	Gammaproteobacteria	5.12807	52.2	-	AUXR01	19	5313	4990	3/28/14	2/27/17	Contig	Frederick National Laboratory for Cancer Research	SAMN01983950	GCA_000688355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/355/GCA_000688355.1_Salmonella_Aqua	-	NVSL2001
Campylobacter jejuni	197	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.64932	30.4	-	CYRW01	146	1752	1534	9/11/15	4/10/17	Scaffold	LSHTM	SAMEA3487087	GCA_001292045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/045/GCA_001292045.1_RC526_S51contigs.fa	-	RC526
Listeria monocytogenes	1639	PRJNA377767	377767	Terrabacteria group	Firmicutes	3.03854	37.9	-	NAUW01	13	3072	2984	4/28/17	5/3/17	Contig	Queensland Health	SAMN06472810	GCA_002114975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/975/GCA_002114975.1_ASM211497v1	-	FRR B 2962
Mycobacterium tuberculosis MAL010080	1354144	PRJNA211636	211636	Terrabacteria group	Actinobacteria	4.41588	65.6	-	JLAU01	5	4274	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231105	GCA_000666285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/285/GCA_000666285.1_Myco_tube_MAL010080_V1	-	MAL010080
Escherichia coli HVH 180 (4-3051617)	1281108	PRJNA186207	186207	Proteobacteria	Gammaproteobacteria	5.18278	50.6	-	AVYH01	12	5406	5080	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885820	GCA_000458685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/685/GCA_000458685.1_Esch_coli_HVH_180_4-3051617_V1	-	HVH 180 (4-3051617)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.03906	39.6	-	COBU02	163	2219	2004	3/22/15	3/11/17	Contig	SC	SAMEA1462991	GCA_001127285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/285/GCA_001127285.2_7622_3_52	-	CH2026
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.88053	66	-	LLSA01	99	6638	6414	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128665	GCA_001452405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/405/GCA_001452405.1_WH-SGI-V-07680	26604259	WH-SGI-V-07680
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.05782	39	-	JWVL03	164	3943	3809	12/29/14	3/18/17	Contig	JCVI	SAMN03084818	GCA_000810405.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/405/GCA_000810405.3_ASM81040v3	-	UH81_389
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.47058	41.4	-	CEFF01	325	-	-	2/14/15	2/14/15	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233908	GCA_000937615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/615/GCA_000937615.1_Velvet_assembly	-	LS2Z
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.67082	50.8	-	FUBC01	400	5262	4471	1/28/17	2/26/17	Scaffold	SC	SAMEA1569652	GCA_900159845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/845/GCA_900159845.1_8403_8_15	-	sh1399
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.09889	28.3	-	FUSF01	30	3809	3656	2/14/17	2/23/17	Scaffold	SC	SAMEA3375064	GCA_900165865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/865/GCA_900165865.1_16852_2_92	-	VRECD0109
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	5.73956	57	-	LJEM02	155	5829	5502	10/15/15	2/21/17	Contig	University of KwaZulu Natal	SAMN04011446	GCA_001317375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/375/GCA_001317375.2_36_S18v02	-	ST101:945154233
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.13025	64.1	-	FSJK01	17	5150	5046	12/14/16	4/2/17	Scaffold	SC	SAMEA2070306	GCA_900136765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/765/GCA_900136765.1_10625_5_34	-	119
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.52473	64.1	-	FVNR01	52	5662	5450	3/10/17	3/18/17	Scaffold	SC	SAMEA2070718	GCA_900136775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/775/GCA_900136775.1_10625_5_35	-	120
Klebsiella pneumoniae ATCC 43816	1316582	PRJEB8210	278135	Proteobacteria	Gammaproteobacteria	5.22806	57.9	-	CDMU01	1	5191	4943	3/15/15	2/21/17	Contig	URMITE	SAMEA3207734	GCA_001373075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/075/GCA_001373075.1_PRJEB8210_assembly_1	-	45T1-2A
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.23872	28.9	-	FUSG01	50	4055	3852	2/14/17	2/23/17	Scaffold	SC	SAMEA3375065	GCA_900165875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/875/GCA_900165875.1_16852_2_93	-	VRECD0110
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.55213	50.8	-	FUAZ01	404	5082	4325	1/28/17	2/26/17	Scaffold	SC	SAMEA1569689	GCA_900159855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/855/GCA_900159855.1_8403_8_14	-	sh1398
Streptococcus suis	1307	PRJEB8392	275464	Terrabacteria group	Firmicutes	2.47669	41.3	-	CEDY01	335	-	-	2/14/15	2/14/15	Contig	UNIVERSITY OF CAMBRIDGE	SAMEA3233907	GCA_000941215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/215/GCA_000941215.1_Velvet_assembly	-	LS2V
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.82247	39	-	JWVP03	174	3689	3558	12/29/14	3/18/17	Contig	JCVI	SAMN03084814	GCA_000810425.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/425/GCA_000810425.3_ASM81042v3	-	UH293_373
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.58124	66.3	-	LLSB01	74	6299	6130	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128666	GCA_001452415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/415/GCA_001452415.1_WH-SGI-V-07681	26604259	WH-SGI-V-07681
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.09417	39.6	-	CPNF01	69	2277	2091	3/22/15	3/11/17	Contig	SC	SAMEA682305	GCA_001127305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/305/GCA_001127305.1_5392_5_2	-	spnSP681
Escherichia coli HVH 182 (4-0985554)	1281109	PRJNA186208	186208	Proteobacteria	Gammaproteobacteria	5.19191	50.6	-	AVYI01	15	5318	4958	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885821	GCA_000458705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/705/GCA_000458705.1_Esch_coli_HVH_182_4-0985554_V1	-	HVH 182 (4-0985554)
Mycobacterium tuberculosis MAL010086	1354145	PRJNA211638	211638	Terrabacteria group	Actinobacteria	4.4222	65.5	-	JLAS01	4	4284	4108	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231107	GCA_000666325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/325/GCA_000666325.1_Myco_tube_MAL010086_V1	-	MAL010086
Listeria monocytogenes	1639	PRJNA377767	377767	Terrabacteria group	Firmicutes	3.04044	37.9	-	NAUX01	17	3080	2989	4/28/17	5/3/17	Contig	Queensland Health	SAMN06472809	GCA_002115005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/005/GCA_002115005.1_ASM211500v1	-	FRR B 2961
Campylobacter jejuni	197	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.80307	30.1	-	CYRH01	203	1932	1753	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487073	GCA_001292145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/145/GCA_001292145.1_RC317_S37contigs.fa	-	RC317
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661	1182172	PRJNA162801	162801	Proteobacteria	Gammaproteobacteria	4.76243	52.2	-	JMMG01	194	4858	4586	6/5/14	2/26/17	Contig	FDA	SAMN00991042	GCA_000698515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/515/GCA_000698515.1_CFSAN000661_01.0	-	CFSAN000661
Staphylococcus aureus M0850	1388622	PRJNA216795	216795	Terrabacteria group	Firmicutes	2.92579	32.8	-	JCQF01	53	3094	2922	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325746	GCA_000544465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/465/GCA_000544465.1_Stap_aure_M0850_V1	-	M0850
Staphylococcus aureus M0851	1388623	PRJNA216796	216796	Terrabacteria group	Firmicutes	2.89397	32.8	-	JCQG01	68	3082	2900	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325747	GCA_000544485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/485/GCA_000544485.1_Stap_aure_M0851_V1	-	M0851
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000968	1183391	PRJNA163181	163181	Proteobacteria	Gammaproteobacteria	4.86056	52.1	-	JMMF01	152	4974	4716	6/5/14	2/26/17	Contig	FDA	SAMN01942268	GCA_000698535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/535/GCA_000698535.1_CFSAN000968_01.0	-	CFSAN000968
Campylobacter jejuni	197	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.70161	30.4	-	CYRU01	91	1810	1664	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487086	GCA_001292185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/185/GCA_001292185.1_RC517_S50contigs.fa	-	RC517
Listeria monocytogenes	1639	PRJNA377767	377767	Terrabacteria group	Firmicutes	2.92544	37.9	-	NAUY01	17	2956	2871	4/28/17	5/3/17	Contig	Queensland Health	SAMN06472808	GCA_002115025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/025/GCA_002115025.1_ASM211502v1	-	FRR B 2955
Mycobacterium tuberculosis MAL010087	1354146	PRJNA211639	211639	Terrabacteria group	Actinobacteria	4.41594	65.6	-	JLAR01	2	4297	4135	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231108	GCA_000666345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/345/GCA_000666345.1_Myco_tube_MAL010087_V1	-	MAL010087
Escherichia coli HVH 183 (4-3205932)	1281110	PRJNA186209	186209	Proteobacteria	Gammaproteobacteria	5.48852	50.7	-	AVYJ01	14	5638	5317	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885822	GCA_000458725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/725/GCA_000458725.1_Esch_coli_HVH_183_4-3205932_V1	-	HVH 183 (4-3205932)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09948	39.6	-	CNRG02	154	2273	2070	3/23/15	3/11/17	Contig	SC	SAMEA1032737	GCA_001127325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/325/GCA_001127325.2_6999_1_16	-	R34-3199
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.8951	66	-	LLSF01	151	6712	6463	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128670	GCA_001452445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/445/GCA_001452445.1_WH-SGI-V-07685	26604259	WH-SGI-V-07685
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.14677	39	-	JWVO03	145	4052	3907	12/29/14	3/18/17	Contig	JCVI	SAMN03084815	GCA_000810445.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/445/GCA_000810445.3_ASM81044v3	-	UH293_377
Streptococcus suis	1307	PRJNA279995	279995	Terrabacteria group	Firmicutes	2.61962	41.3	-	LDOL01	184	2684	2463	9/17/15	11/24/15	Contig	USDA-ARS	SAMN03485889	GCA_001293335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/335/GCA_001293335.1_Ssuis29-12_v1.0	26543125	ISU2912
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.7226	50.8	-	FUBD01	440	5338	4511	1/28/17	2/26/17	Scaffold	SC	SAMEA1569656	GCA_900159865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/865/GCA_900159865.1_8403_8_16	-	sh1400
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.01275	28.4	-	FUSK01	32	3673	3550	2/14/17	2/23/17	Scaffold	SC	SAMEA2239414	GCA_900165885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/885/GCA_900165885.1_11670_1_66	-	CD63
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA295554	295554	Proteobacteria	Gammaproteobacteria	5.83963	57.1	-	LJOO01	199	6045	5697	10/19/15	2/21/17	Contig	University of Siena	SAMN04075698	GCA_001399815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/399/815/GCA_001399815.1_ScK55	24823690	KK207/1
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.36884	64.1	-	FSJJ01	90	5473	5255	12/14/16	3/21/17	Scaffold	SC	SAMEA2071239	GCA_900136795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/795/GCA_900136795.1_10625_5_36	-	121
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.03761	64.1	-	FVNX01	23	5043	4911	3/10/17	3/18/17	Scaffold	SC	SAMEA2071241	GCA_900136835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/835/GCA_900136835.1_10625_5_42	-	127
Klebsiella pneumoniae	573	PRJEB9899	297299	Proteobacteria	Gammaproteobacteria	5.27193	57.4	-	CXPD01	46	5210	4999	9/29/15	2/21/17	Contig	UNIVERSITE CLERMONT AUVERGNE	SAMEA3488276	GCA_001404095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/095/GCA_001404095.1_CH1034	-	CH1034
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.01473	28.4	-	FUSJ01	26	3680	3551	2/14/17	2/23/17	Scaffold	SC	SAMEA2239377	GCA_900165895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/895/GCA_900165895.1_11670_1_27	-	CD26
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.58971	50.8	-	FUBE01	374	5166	4374	1/28/17	2/26/17	Scaffold	SC	SAMEA1569671	GCA_900159875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/875/GCA_900159875.1_8403_8_17	-	sh1401
Streptococcus suis YY060816	1416913	PRJNA226220	226220	Terrabacteria group	Firmicutes	2.08922	41.2	-	AYSB01	81	-	-	1/11/17	1/11/17	Contig	Nanjing Agricultural University	SAMN03276168	GCA_001945645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/645/GCA_001945645.1_ASM194564v1	27774436	YY060816
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.85986	38.9	-	JWYR03	104	3725	3595	12/29/14	3/18/17	Contig	JCVI	SAMN03084729	GCA_000810465.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/465/GCA_000810465.3_ASM81046v3	-	UH348_25
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.17816	65.7	-	LLSI01	123	6953	6679	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128673	GCA_001452485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/485/GCA_001452485.1_WH-SGI-V-07688	26604259	WH-SGI-V-07688
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.07002	39.5	-	CLXL01	71	2282	2059	3/21/15	3/11/17	Contig	SC	SAMEA1028891	GCA_001127345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/345/GCA_001127345.1_6983_5_8	-	SMRU2312
Escherichia coli HVH 184 (4-3343286)	1281111	PRJNA186210	186210	Proteobacteria	Gammaproteobacteria	5.42684	50.5	-	AVYK01	23	5733	5345	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885823	GCA_000458745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/745/GCA_000458745.1_Esch_coli_HVH_184_4-3343286_V1	-	HVH 184 (4-3343286)
Mycobacterium tuberculosis MAL010088	1354147	PRJNA211640	211640	Terrabacteria group	Actinobacteria	4.41149	65.5	-	JLAQ01	13	4288	4110	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231109	GCA_000666365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/365/GCA_000666365.1_Myco_tube_MAL010088_V1	-	MAL010088
Listeria monocytogenes	1639	PRJNA377767	377767	Terrabacteria group	Firmicutes	3.06933	37.9	-	NAUZ01	21	3118	3022	4/28/17	5/3/17	Contig	Queensland Health	SAMN06472807	GCA_002115035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/035/GCA_002115035.1_ASM211503v1	-	FRR B 2887
Campylobacter jejuni	197	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.70189	30.2	-	CYQH01	212	1840	1600	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487048	GCA_001292245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/245/GCA_001292245.1_RC104_S12contigs.fa	-	RC104
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000203	1173453	PRJNA159331	159331	Proteobacteria	Gammaproteobacteria	4.64961	52.3	-	JMMI01	279	4707	4447	6/5/14	2/26/17	Contig	FDA	SAMN01942249	GCA_000698615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/615/GCA_000698615.1_CFSAN000203_01.0	-	CFSAN000203
Staphylococcus aureus M0852	1388624	PRJNA216797	216797	Terrabacteria group	Firmicutes	2.88443	32.8	-	JCQH01	57	3063	2896	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325748	GCA_000544505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/505/GCA_000544505.1_Stap_aure_M0852_V1	-	M0852
Staphylococcus aureus M0853	1388625	PRJNA216798	216798	Terrabacteria group	Firmicutes	2.90406	32.7	-	JCQI01	67	3085	2949	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325749	GCA_000544525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/525/GCA_000544525.1_Stap_aure_M0853_V1	-	M0853
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000191	1173457	PRJNA159339	159339	Proteobacteria	Gammaproteobacteria	4.68427	52.2	-	JMMH01	61	4734	4520	6/5/14	2/26/17	Contig	FDA	SAMN00860590	GCA_000698635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/635/GCA_000698635.1_CFSAN000191_01.0	-	CFSAN000191
Campylobacter jejuni	197	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.72438	30.2	-	CYQP01	150	1834	1660	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487055	GCA_001292285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/285/GCA_001292285.1_RC168_S19contigs.fa	-	RC168
Listeria monocytogenes	1639	PRJNA377767	377767	Terrabacteria group	Firmicutes	3.00026	37.9	-	NAVA01	56	3073	2968	4/28/17	5/3/17	Contig	Queensland Health	SAMN06472806	GCA_002115065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/065/GCA_002115065.1_ASM211506v1	-	FRR B 2727
Mycobacterium tuberculosis MAL010103	1354148	PRJNA211651	211651	Terrabacteria group	Actinobacteria	4.41686	65.5	-	JLAL01	4	4281	4124	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231118	GCA_000666465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/465/GCA_000666465.1_Myco_tube_MAL010103_V1	-	MAL010103
Escherichia coli HVH 185 (4-2876639)	1281112	PRJNA186211	186211	Proteobacteria	Gammaproteobacteria	5.21363	50.3	-	AVYL01	11	5336	4990	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885824	GCA_000458765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/765/GCA_000458765.1_Esch_coli_HVH_185_4-2876639_V1	-	HVH 185 (4-2876639)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.98369	39.7	-	CNVW02	124	2186	1975	3/23/15	3/11/17	Contig	SC	SAMEA1032713	GCA_001127405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/405/GCA_001127405.2_7001_1_1	-	R34-3078
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.03437	66	-	LLSJ01	115	6785	6574	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128674	GCA_001452495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/495/GCA_001452495.1_WH-SGI-V-07689	26604259	WH-SGI-V-07689
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.87445	38.8	-	JWWF03	119	3754	3625	12/29/14	3/18/17	Contig	JCVI	SAMN03084795	GCA_000810485.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/485/GCA_000810485.3_ASM81048v3	-	UH514_288
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.01434	41.4	-	CZEM01	72	-	-	6/30/16	6/30/16	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595202	GCA_900007865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/865/GCA_900007865.1_assembly_9402159	-	-
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.60553	50.7	-	FUBF01	391	5159	4411	1/28/17	2/26/17	Scaffold	SC	SAMEA1570024	GCA_900159885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/885/GCA_900159885.1_8403_8_18	-	sh1402
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.01398	28.4	-	FUSH01	36	3681	3554	2/14/17	2/23/17	Scaffold	SC	SAMEA2239368	GCA_900165905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/905/GCA_900165905.1_11670_1_18	-	CD17
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.39031	57.4	-	JTKC01	61	5395	5171	12/4/15	2/21/17	Contig	unverisity medical center groningen	SAMN03222890	GCA_001457285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/285/GCA_001457285.1_ASM145728v1	26617589	KPOI-1/4
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.22725	64.1	-	FSJP01	24	5301	5182	12/14/16	3/21/17	Scaffold	SC	SAMEA2071245	GCA_900136865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/865/GCA_900136865.1_10625_5_57	-	142
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.93444	64.2	-	FSJN01	20	4877	4762	12/14/16	3/21/17	Scaffold	SC	SAMEA1964489	GCA_900136885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/885/GCA_900136885.1_10625_5_56	-	141
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.39527	57.4	-	JUBH01	59	5398	5175	12/4/15	2/21/17	Contig	unverisity medical center groningen	SAMN03223189	GCA_001457335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/335/GCA_001457335.1_ASM145733v1	26617589	KPOI-2
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.07906	28.6	-	FUSL01	25	3731	3599	2/14/17	2/23/17	Scaffold	SC	SAMEA2239404	GCA_900165915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/915/GCA_900165915.1_11670_1_56	-	CD53
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.57572	50.8	-	FUBG01	376	5139	4355	1/28/17	2/26/17	Scaffold	SC	SAMEA1570015	GCA_900159895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/895/GCA_900159895.1_8403_8_19	-	sh1403
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.07425	41.3	-	CZFK01	72	-	-	6/30/16	6/30/16	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595226	GCA_900009905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/905/GCA_900009905.1_assembly_GD-0032	-	-
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.04658	38.9	-	JWYS03	115	3937	3809	12/29/14	3/18/17	Contig	JCVI	SAMN03084728	GCA_000810505.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/505/GCA_000810505.3_ASM81050v3	-	UH243_14
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.94672	65.8	-	LLSK01	347	6644	6366	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128675	GCA_001452525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/525/GCA_001452525.1_WH-SGI-V-07690	26604259	WH-SGI-V-07690
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09397	39.7	-	CMBS01	75	2317	2106	3/21/15	3/11/17	Contig	SC	SAMEA1029399	GCA_001127425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/425/GCA_001127425.1_7004_7_55	-	SMRU2887
Escherichia coli HVH 186 (4-3405044)	1281113	PRJNA186212	186212	Proteobacteria	Gammaproteobacteria	5.41478	50.7	-	AVYM01	56	5225	4895	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885825	GCA_000458785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/785/GCA_000458785.1_Esch_coli_HVH_186_4-3405044_V1	-	HVH 186 (4-3405044)
Mycobacterium tuberculosis MAL010105	1354149	PRJNA211652	211652	Terrabacteria group	Actinobacteria	4.41666	65.6	-	JLAK01	3	4292	4113	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231119	GCA_000666485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/485/GCA_000666485.1_Myco_tube_MAL010105_V1	-	MAL010105
Listeria monocytogenes	1639	PRJNA377767	377767	Terrabacteria group	Firmicutes	3.05808	37.8	-	NAUE01	31	3141	3049	4/28/17	5/3/17	Contig	Queensland Health	SAMN06472828	GCA_002115205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/205/GCA_002115205.1_ASM211520v1	-	FRR B 2985
Campylobacter jejuni	197	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.79858	30.1	-	CYRB01	230	1944	1745	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487066	GCA_001292385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/385/GCA_001292385.1_RC280_S30contigs.fa	-	RC280
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000179	1173465	PRJNA159355	159355	Proteobacteria	Gammaproteobacteria	4.78853	52.2	-	JMMK01	79	4913	4686	6/5/14	2/26/17	Contig	FDA	SAMN00862207	GCA_000698675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/675/GCA_000698675.1_CFSAN000179_01.0	-	CFSAN000179
Staphylococcus aureus M0855	1388627	PRJNA216800	216800	Terrabacteria group	Firmicutes	2.86976	32.8	-	JCQJ01	50	3033	2860	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325751	GCA_000544545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/545/GCA_000544545.1_Stap_aure_M0855_V1	-	M0855
Staphylococcus aureus M0858	1388629	PRJNA216802	216802	Terrabacteria group	Firmicutes	2.89586	32.7	-	JCQK01	70	3068	2929	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325753	GCA_000544565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/565/GCA_000544565.1_Stap_aure_M0858_V1	-	M0858
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001087	1196346	PRJNA167846	167846	Proteobacteria	Gammaproteobacteria	4.77892	52.2	-	JMML02	89	4837	4602	6/5/14	2/27/17	Contig	US Food and Drug Administration	SAMN01057783	GCA_000698695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/695/GCA_000698695.2_CFSAN001087_03.0	-	CFSAN001087
Campylobacter jejuni	197	PRJEB9722	295451	Proteobacteria	delta/epsilon subdivisions	1.79093	31.1	-	CYRC01	121	1855	1738	9/11/15	3/18/17	Scaffold	LSHTM	SAMEA3487062	GCA_001292465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/465/GCA_001292465.1_RC220_S26contigs.fa	-	RC220
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.95097	37.8	-	MTEZ01	17	3011	2915	5/11/17	5/23/17	Contig	FDA	SAMN03299418	GCA_002132085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/085/GCA_002132085.1_ASM213208v1	28464038	FDA00008758
Mycobacterium tuberculosis MAL010106	1354150	PRJNA211653	211653	Terrabacteria group	Actinobacteria	4.43071	65.6	-	JLAJ01	4	4302	4133	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231120	GCA_000666505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/505/GCA_000666505.1_Myco_tube_MAL010106_V1	-	MAL010106
Escherichia coli HVH 187 (4-4471660)	1281114	PRJNA186213	186213	Proteobacteria	Gammaproteobacteria	5.48599	50.6	-	AVYN01	16	5585	5154	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885826	GCA_000458805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/805/GCA_000458805.1_Esch_coli_HVH_187_4-4471660_V1	-	HVH 187 (4-4471660)
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09565	39.7	-	CKTB01	93	2325	2121	3/21/15	3/11/17	Contig	SC	SAMEA1025475	GCA_001127445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/445/GCA_001127445.1_6807_3_19	-	SMRU1627
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.46797	66.4	-	LLSM01	73	6155	5998	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128677	GCA_001452545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/545/GCA_001452545.1_WH-SGI-V-07692	26604259	WH-SGI-V-07692
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.0478	38.9	-	JWYP03	107	3940	3809	12/29/14	3/18/17	Contig	JCVI	SAMN03084731	GCA_000810525.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/525/GCA_000810525.3_ASM81052v3	-	UH243_33
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	2.00902	41.4	-	CZFP01	73	-	-	6/30/16	6/30/16	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595233	GCA_900010745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/745/GCA_900010745.1_assembly_GD-0053	-	-
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.63014	50.9	-	FUBH01	413	5216	4423	1/28/17	2/26/17	Scaffold	SC	SAMEA1569764	GCA_900159905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/905/GCA_900159905.1_8403_8_20	-	sh1404
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.19712	28.2	-	FUSI01	41	3865	3734	2/14/17	2/23/17	Scaffold	SC	SAMEA2239378	GCA_900165925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/925/GCA_900165925.1_11670_1_28	-	CD27
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.40132	57.4	-	JUDS01	62	5404	5183	12/4/15	2/21/17	Contig	unverisity medical center groningen	SAMN03223196	GCA_001460475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/460/475/GCA_001460475.1_ASM146047v1	26617589	KPOI-5
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.36963	64	-	FSJQ01	50	5444	5251	12/14/16	4/2/17	Scaffold	SC	SAMEA2070416	GCA_900136905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/905/GCA_900136905.1_10625_5_58	-	143
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.13468	64.1	-	FSJT01	25	5158	5023	12/14/16	3/21/17	Scaffold	SC	SAMEA2259552	GCA_900136915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/915/GCA_900136915.1_11861_7_15	-	747
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.3915	57.4	-	JUBK01	64	5398	5171	12/4/15	2/21/17	Contig	unverisity medical center groningen	SAMN03223202	GCA_001460495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/460/495/GCA_001460495.1_ASM146049v1	26617589	KPEI-2
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.15762	28.7	-	FUSO01	54	3907	3640	2/14/17	2/23/17	Scaffold	SC	SAMEA2239379	GCA_900165935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/935/GCA_900165935.1_11670_1_29	-	CD28
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.60853	50.7	-	FUBI01	393	5117	4425	1/28/17	2/26/17	Scaffold	SC	SAMEA1569760	GCA_900159915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/915/GCA_900159915.1_8403_8_21	-	sh1405
Streptococcus suis	1307	PRJEB11219	327337	Terrabacteria group	Firmicutes	1.98212	41.4	-	CZHB01	80	-	-	6/30/16	6/30/16	Contig	ACADEMIC MEDICAL CENTER	SAMEA3595268	GCA_900015085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/085/GCA_900015085.1_assembly_OV585	-	-
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.0306	39	-	JWYH03	170	3923	3791	12/29/14	3/18/17	Contig	JCVI	SAMN03084739	GCA_000810545.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/545/GCA_000810545.3_ASM81054v3	-	UH243_56
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.10518	65.9	-	LLSN01	200	6956	6676	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128678	GCA_001452565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/565/GCA_001452565.1_WH-SGI-V-07693	26604259	WH-SGI-V-07693
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05218	39.6	-	CNZC02	221	2183	2005	3/23/15	3/11/17	Contig	SC	SAMEA1463015	GCA_001127545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/545/GCA_001127545.2_7553_5_53	-	NP7100
Escherichia coli HVH 188 (4-2356988)	1281115	PRJNA186214	186214	Proteobacteria	Gammaproteobacteria	5.09436	50.7	-	AVYO01	9	5293	4918	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885827	GCA_000458825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/825/GCA_000458825.1_Esch_coli_HVH_188_4-2356988_V1	-	HVH 188 (4-2356988)
Mycobacterium tuberculosis MAL010108	1354151	PRJNA211654	211654	Terrabacteria group	Actinobacteria	4.41936	65.6	-	JLAI01	2	4301	4113	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231121	GCA_000666525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/525/GCA_000666525.1_Myco_tube_MAL010108_V1	-	MAL010108
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.90988	37.9	-	MTDG01	13	2950	2850	5/11/17	5/23/17	Contig	FDA	SAMN02990447	GCA_002132165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/165/GCA_002132165.1_ASM213216v1	28464038	MOD1_LS984
Campylobacter jejuni	197	PRJNA293582	293582	Proteobacteria	delta/epsilon subdivisions	1.60888	30.5	-	LISL01	22	1684	1574	2/2/16	3/19/17	Scaffold	China CDC	SAMN04008118	GCA_001547595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/595/GCA_001547595.1_ASM154759v1	-	BJ-CJD70
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000211	1173459	PRJNA159343	159343	Proteobacteria	Gammaproteobacteria	4.68462	52.2	-	JMMM01	58	4730	4523	6/5/14	2/26/17	Contig	FDA	SAMN00989085	GCA_000698715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/715/GCA_000698715.1_CFSAN000211_01.0	-	CFSAN000211
Staphylococcus aureus M0861	1388630	PRJNA216803	216803	Terrabacteria group	Firmicutes	2.90209	32.8	-	JCQL01	67	3081	2895	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325754	GCA_000544585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/585/GCA_000544585.1_Stap_aure_M0861_V1	-	M0861
Staphylococcus aureus M0862	1388631	PRJNA216804	216804	Terrabacteria group	Firmicutes	2.90284	32.9	-	JCQM01	51	3062	2871	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325755	GCA_000544605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/605/GCA_000544605.1_Stap_aure_M0862_V1	-	M0862
Salmonella enterica subsp. enterica serovar Heidelberg str. RI-11-013988	1054952	PRJNA69883	69883	Proteobacteria	Gammaproteobacteria	4.72003	52.2	-	AKYL01	58	4819	4396	6/9/14	2/26/17	Contig	FDA	SAMN01041039	GCA_000699605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/605/GCA_000699605.1_SEEH3988_1.0	-	RI-11-013988
Campylobacter jejuni	197	PRJNA293583	293583	Proteobacteria	delta/epsilon subdivisions	1.73758	30.3	-	LISM01	31	1808	1660	2/2/16	3/19/17	Scaffold	China CDC	SAMN04008120	GCA_001547605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/605/GCA_001547605.1_ASM154760v1	-	BJ-CJD120
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.91083	37.9	-	MTFO01	14	2948	2855	5/11/17	5/23/17	Contig	FDA	SAMN02991382	GCA_002132325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/325/GCA_002132325.1_LS995.fasta	28464038	MOD1_LS995
Mycobacterium tuberculosis MAL010109	1354152	PRJNA211655	211655	Terrabacteria group	Actinobacteria	4.39397	65.5	-	JLAH01	8	4269	4095	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231122	GCA_000666545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/545/GCA_000666545.1_Myco_tube_MAL010109_V1	-	MAL010109
Escherichia coli HVH 189 (4-3220125)	1281116	PRJNA186215	186215	Proteobacteria	Gammaproteobacteria	5.49197	50.6	-	AVYP01	19	5753	5367	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885828	GCA_000458845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/845/GCA_000458845.1_Esch_coli_HVH_189_4-3220125_V1	-	HVH 189 (4-3220125)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0771	39.6	-	COFB02	137	2280	2069	3/23/15	3/5/17	Contig	SC	SAMEA1463067	GCA_001127625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/625/GCA_001127625.2_7622_5_72	-	ND6008
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.77644	66.2	-	LLSO01	106	6467	6267	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128679	GCA_001452575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/575/GCA_001452575.1_WH-SGI-V-07694	26604259	WH-SGI-V-07694
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.04824	38.9	-	JWYG03	121	3946	3808	12/29/14	3/18/17	Contig	JCVI	SAMN03084740	GCA_000810565.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/565/GCA_000810565.3_ASM81056v3	-	UH243_57
Streptococcus suis	1307	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.81846	39.4	-	DBZG01	33	-	-	9/19/17	9/19/17	Scaffold	University of Queensland	SAMN06452729	GCA_002311075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/311/075/GCA_002311075.1_ASM231107v1	28894102	-
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.6016	50.8	-	FUBK01	412	5111	4399	1/28/17	2/26/17	Scaffold	SC	SAMEA1569775	GCA_900159925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/925/GCA_900159925.1_8403_8_22	-	sh1406
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.102	28.6	-	FUSM01	39	3784	3659	2/14/17	2/23/17	Scaffold	SC	SAMEA2239416	GCA_900165945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/945/GCA_900165945.1_11670_1_68	-	CD65
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.3896	57.4	-	JUBJ01	61	5395	5165	12/4/15	2/21/17	Contig	unverisity medical center groningen	SAMN03223201	GCA_001460975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/460/975/GCA_001460975.1_ASM146097v1	26617589	KPEI-1
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.07388	64.1	-	FVOF01	17	5076	4974	3/10/17	3/18/17	Scaffold	SC	SAMEA2160528	GCA_900136925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/925/GCA_900136925.1_10660_1_22	-	552
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.13374	64.1	-	FSJU01	24	5150	5026	12/14/16	3/21/17	Scaffold	SC	SAMEA2259551	GCA_900136935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/935/GCA_900136935.1_11861_7_14	-	746
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.67478	57.1	-	LNGQ01	139	5852	5587	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158273	GCA_001462525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/525/GCA_001462525.1_ASM146252v1	-	K48-58
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.12293	28.3	-	FUSN01	37	3776	3649	2/14/17	2/23/17	Scaffold	SC	SAMEA2239353	GCA_900165955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/955/GCA_900165955.1_11670_1_2	-	CD02
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.48803	50.8	-	FUBL01	357	4989	4253	1/28/17	3/2/17	Scaffold	SC	SAMEA1569794	GCA_900159945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/945/GCA_900159945.1_8403_8_24	-	sh1408
Streptococcus suis	1307	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.71799	39.3	-	DCLW01	128	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456995	GCA_002321175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/175/GCA_002321175.1_ASM232117v1	28894102	-
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.01387	38.9	-	JWWE03	162	3921	3765	12/29/14	3/18/17	Contig	JCVI	SAMN03084798	GCA_000810585.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/585/GCA_000810585.3_ASM81058v3	-	UH184_295
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.38407	66.4	-	LLSR01	79	6061	5910	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128682	GCA_001452605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/605/GCA_001452605.1_WH-SGI-V-07697	26604259	WH-SGI-V-07697
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12321	39.6	-	CKRD01	53	2358	2144	3/21/15	3/11/17	Contig	SC	SAMEA1024913	GCA_001127725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/725/GCA_001127725.1_6680_7_3	-	SMRU963
Escherichia coli HVH 191 (3-9341900)	1281118	PRJNA186217	186217	Proteobacteria	Gammaproteobacteria	5.37002	50.6	-	AVYR01	18	5590	5239	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885830	GCA_000458875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/875/GCA_000458875.1_Esch_coli_HVH_191_3-9341900_V1	-	HVH 191 (3-9341900)
Mycobacterium tuberculosis MAL010110	1354153	PRJNA211656	211656	Terrabacteria group	Actinobacteria	4.41033	65.6	-	JLAG01	4	4283	4117	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231123	GCA_000666565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/565/GCA_000666565.1_Myco_tube_MAL010110_V1	-	MAL010110
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.91028	37.9	-	MTFF01	12	2949	2852	5/11/17	5/23/17	Contig	FDA	SAMN02991392	GCA_002132405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/405/GCA_002132405.1_LS1008.fasta	28464038	MOD1_LS1008
Campylobacter jejuni	197	PRJNA293581	293581	Proteobacteria	delta/epsilon subdivisions	1.75041	30.2	-	LISK01	46	1832	1678	2/2/16	3/19/17	Scaffold	China CDC	SAMN04008117	GCA_001547615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/615/GCA_001547615.1_ASM154761v1	-	BJ-CJD63
Salmonella enterica subsp. enterica serovar Heidelberg str. RI-11-014319	1030001	PRJNA66699	66699	Proteobacteria	Gammaproteobacteria	4.75127	52.1	-	AMLX01	88	4861	4569	6/9/14	2/26/17	Contig	FDA	SAMN01087973	GCA_000699625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/625/GCA_000699625.1_ASM69962v1	-	RI-11-014319
Staphylococcus aureus M0863	1388640	PRJNA216813	216813	Terrabacteria group	Firmicutes	2.86372	32.9	-	JCQN01	30	2991	2821	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325764	GCA_000544625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/625/GCA_000544625.1_Stap_aure_M0863_V1	-	M0863
Staphylococcus aureus M0865	1388642	PRJNA216815	216815	Terrabacteria group	Firmicutes	2.89935	32.9	-	JCQO01	26	3052	2886	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325766	GCA_000544645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/645/GCA_000544645.1_Stap_aure_M0865_V1	-	M0865
Salmonella enterica subsp. enterica serovar Heidelberg str. RI-11-013312	1037256	PRJNA67427	67427	Proteobacteria	Gammaproteobacteria	4.72012	52.2	-	AKYK01	57	4822	4387	6/10/14	3/5/17	Contig	FDA	SAMN01041038	GCA_000700765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/765/GCA_000700765.1_SEEH3312_1.0	-	RI-11-013312
Campylobacter jejuni	197	PRJNA293579	293579	Proteobacteria	delta/epsilon subdivisions	1.65569	30.5	-	LISI01	18	1742	1613	2/2/16	3/19/17	Scaffold	China CDC	SAMN04008115	GCA_001547625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/625/GCA_001547625.1_ASM154762v1	-	BJ-CJD39
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.91142	37.9	-	MTDF01	13	2953	2853	5/11/17	5/23/17	Contig	FDA	SAMN02990444	GCA_002132415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/415/GCA_002132415.1_ASM213241v1	28464038	MOD1_LS978
Mycobacterium tuberculosis MAL010121	1354158	PRJNA211662	211662	Terrabacteria group	Actinobacteria	4.40969	65.6	-	JLAA01	5	4282	4111	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231129	GCA_000666665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/665/GCA_000666665.1_Myco_tube_MAL010121_V1	-	MAL010121
Escherichia coli HVH 192 (4-3054470)	1281119	PRJNA186218	186218	Proteobacteria	Gammaproteobacteria	5.23122	50.5	-	AVYS01	7	5388	5073	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885831	GCA_000458895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/895/GCA_000458895.1_Esch_coli_HVH_192_4-3054470_V1	-	HVH 192 (4-3054470)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05936	39.6	-	CNQV02	177	2207	2018	3/23/15	3/11/17	Contig	SC	SAMEA1032413	GCA_001127805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/805/GCA_001127805.2_6999_1_2	-	R34-3185
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.74902	66	-	LLST01	130	6464	6253	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128684	GCA_001452615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/615/GCA_001452615.1_WH-SGI-V-07699	26604259	WH-SGI-V-07699
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.00974	39	-	JWYF03	187	3919	3742	12/29/14	3/18/17	Contig	JCVI	SAMN03084741	GCA_000810605.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/605/GCA_000810605.3_ASM81060v3	-	UH315_58
Streptococcus suis	1307	PRJNA348753	348753	Terrabacteria group	Firmicutes	1.7196	39.7	-	DCYX01	141	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454933	GCA_002331205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/205/GCA_002331205.1_ASM233120v1	28894102	-
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.46797	50.8	-	FUBN01	360	4999	4240	1/28/17	2/26/17	Scaffold	SC	SAMEA1569712	GCA_900159965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/965/GCA_900159965.1_8403_8_26	-	sh1410
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.07944	28.3	-	FUSP01	27	3764	3643	2/14/17	2/23/17	Scaffold	SC	SAMEA2239420	GCA_900165965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/965/GCA_900165965.1_11670_1_72	-	CD69
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.41093	57.3	-	LNGO01	106	5482	5214	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158271	GCA_001462535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/535/GCA_001462535.1_ASM146253v1	-	K46-62
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.86805	64.1	-	FVOA01	13	4820	4683	3/10/17	3/18/17	Scaffold	SC	SAMEA2259573	GCA_900136955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/955/GCA_900136955.1_11861_7_36	-	768
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.20323	64.1	-	FVOB01	20	5293	5081	3/10/17	3/18/17	Scaffold	SC	SAMEA2259590	GCA_900136965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/965/GCA_900136965.1_11861_7_51	-	785
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.66507	57.1	-	LNGR01	125	5816	5569	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158274	GCA_001462545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/545/GCA_001462545.1_ASM146254v1	-	K52-10
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.25492	28.7	-	FUSQ01	61	4057	3750	2/14/17	2/23/17	Scaffold	SC	SAMEA2239355	GCA_900165975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/975/GCA_900165975.1_11670_1_4	-	CD04
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.50354	50.8	-	FUBO01	364	5063	4270	1/28/17	2/26/17	Scaffold	SC	SAMEA1569727	GCA_900159975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/975/GCA_900159975.1_8403_8_27	-	sh1411
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.02146	39	-	JWXB03	141	3911	3759	12/29/14	3/18/17	Contig	JCVI	SAMN03084771	GCA_000810625.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/625/GCA_000810625.3_ASM81062v3	-	UH17_151
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.95042	65.9	-	LLSU01	121	6671	6410	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128685	GCA_001452645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/645/GCA_001452645.1_WH-SGI-V-07700	26604259	WH-SGI-V-07700
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06192	39.5	-	CNST02	153	2236	2048	3/23/15	3/11/17	Contig	SC	SAMEA1032502	GCA_001127845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/845/GCA_001127845.2_6999_3_3	-	1334
Escherichia coli HVH 193 (4-3331423)	1281120	PRJNA186219	186219	Proteobacteria	Gammaproteobacteria	5.02909	50.6	-	AVYT01	4	5105	4791	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885832	GCA_000458915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/915/GCA_000458915.1_Esch_coli_HVH_193_4-3331423_V1	-	HVH 193 (4-3331423)
Mycobacterium tuberculosis MAL010130	1354160	PRJNA211667	211667	Terrabacteria group	Actinobacteria	4.44297	65.5	-	JKZV01	5	4305	4120	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231134	GCA_000666745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/745/GCA_000666745.1_Myco_tube_MAL010130_V1	-	MAL010130
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.95643	37.8	-	MTFB01	25	3016	2919	5/11/17	5/23/17	Contig	FDA	SAMN03760843	GCA_002132575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/575/GCA_002132575.1_ASM213257v1	28464038	PNUSAL001067
Campylobacter jejuni	197	PRJNA293595	293595	Proteobacteria	delta/epsilon subdivisions	1.80833	30.3	-	LISQ01	38	1930	1755	2/2/16	3/19/17	Scaffold	China CDC	SAMN04008499	GCA_001547675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/675/GCA_001547675.1_ASM154767v1	-	JL-CJHLIU1-1
Salmonella enterica subsp. enterica serovar Heidelberg str. 640151-11	1030003	PRJNA66703	66703	Proteobacteria	Gammaproteobacteria	4.79172	52.1	-	AKYO01	76	4907	4604	6/10/14	2/26/17	Contig	FDA	SAMN01041042	GCA_000700785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/785/GCA_000700785.1_SEEH5111_1.0	-	640151-11
Staphylococcus aureus M0866	1388643	PRJNA216816	216816	Terrabacteria group	Firmicutes	2.80902	32.8	-	JCQP01	27	2922	2732	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325767	GCA_000544665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/665/GCA_000544665.1_Stap_aure_M0866_V1	-	M0866
Staphylococcus aureus M0868	1388645	PRJNA216818	216818	Terrabacteria group	Firmicutes	2.89627	32.9	-	JCQQ01	25	3048	2883	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325769	GCA_000544685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/685/GCA_000544685.1_Stap_aure_M0868_V1	-	M0868
Salmonella enterica subsp. enterica serovar Give	46626	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73569	52.2	-	JOKK01	45	4822	4567	7/21/14	2/26/17	Contig	Center for Food Safety and Applied Nutrition	SAMN02800587	GCA_000732045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/045/GCA_000732045.1_CFSAN012622_01.0	26139723	CFSAN012622
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.80533	30.1	-	MJVF01	75	1890	1714	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03359144	GCA_001761585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/585/GCA_001761585.1_ASM176158v1	-	BCW_3787
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.91198	37.9	-	MTFD01	23	2928	2853	5/11/17	5/23/17	Contig	FDA	SAMN04148336	GCA_002132625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/625/GCA_002132625.1_ASM213262v1	28464038	CDPHFDLB-F15M03122-1
Mycobacterium tuberculosis MAL010133	1354154	PRJNA211669	211669	Terrabacteria group	Actinobacteria	4.39306	65.6	-	JKZT01	14	4267	4086	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231136	GCA_000666785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/785/GCA_000666785.1_Myco_tube_MAL010133_V1	-	MAL010133
Escherichia coli HVH 194 (4-2356805)	1281121	PRJNA186220	186220	Proteobacteria	Gammaproteobacteria	5.24173	50.4	-	AVYU01	7	5364	4988	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885833	GCA_000458935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/935/GCA_000458935.1_Esch_coli_HVH_194_4-2356805_V1	-	HVH 194 (4-2356805)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.11174	39.5	-	COFC02	197	2271	2044	3/23/15	3/11/17	Contig	SC	SAMEA1463089	GCA_001127865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/865/GCA_001127865.2_7622_5_68	-	ND6005
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.24491	65.6	-	LLSW01	129	7022	6744	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128687	GCA_001452665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/665/GCA_001452665.1_WH-SGI-V-07702	26604259	WH-SGI-V-07702
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.10102	39.2	-	JWXA03	400	4097	3855	12/29/14	3/18/17	Contig	JCVI	SAMN03084772	GCA_000810645.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/645/GCA_000810645.3_ASM81064v3	-	UH134_167
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.5539	50.7	-	FUBP01	374	5102	4351	1/28/17	2/26/17	Scaffold	SC	SAMEA1569741	GCA_900159985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/985/GCA_900159985.1_8403_8_28	-	sh1412
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.06737	28.3	-	FUSR01	27	3781	3634	2/14/17	2/23/17	Scaffold	SC	SAMEA2239413	GCA_900165985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/985/GCA_900165985.1_11670_1_65	-	CD62
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.60592	57.2	-	LNGP01	117	5771	5510	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158272	GCA_001462555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/555/GCA_001462555.1_ASM146255v1	-	K47-25
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.24678	64.1	-	FSJV01	26	5283	5122	12/14/16	3/21/17	Scaffold	SC	SAMEA2259611	GCA_900136975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/975/GCA_900136975.1_11861_7_71	-	806
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.43384	64	-	FVNW01	16	5511	5331	3/10/17	3/18/17	Scaffold	SC	SAMEA2259614	GCA_900136985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/985/GCA_900136985.1_11861_7_74	-	809
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.67642	57.1	-	LNGS01	166	5861	5575	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158275	GCA_001462605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/605/GCA_001462605.1_ASM146260v1	-	K52-36
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.03243	28.9	-	FUSS01	60	3733	3562	2/14/17	2/23/17	Scaffold	SC	SAMEA2239352	GCA_900165995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/165/995/GCA_900165995.1_11670_1_1	-	CD01
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.66616	50.8	-	FUBR01	384	5267	4460	1/28/17	2/26/17	Scaffold	SC	SAMEA1569799	GCA_900159995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/159/995/GCA_900159995.1_8403_8_34	-	sh1418
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.16525	39	-	JWWZ03	229	4103	3929	12/29/14	3/18/17	Contig	JCVI	SAMN03084773	GCA_000810665.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/665/GCA_000810665.3_ASM81066v3	-	UH134_168
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.82222	66.1	-	LLSX01	115	6577	6348	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128688	GCA_001452675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/675/GCA_001452675.1_WH-SGI-V-07703	26604259	WH-SGI-V-07703
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.00683	39.6	-	CKOB01	44	2215	2010	3/21/15	3/11/17	Contig	SC	SAMEA1024094	GCA_001127905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/905/GCA_001127905.1_6673_8_22	-	SMRU262
Escherichia coli HVH 195 (3-7155360)	1281122	PRJNA186221	186221	Proteobacteria	Gammaproteobacteria	4.73221	50.8	-	AVYV01	2	4756	4507	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885834	GCA_000458955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/955/GCA_000458955.1_Esch_coli_HVH_195_3-7155360_V1	-	HVH 195 (3-7155360)
Mycobacterium tuberculosis MAL010134	1354155	PRJNA211670	211670	Terrabacteria group	Actinobacteria	4.42249	65.5	-	JKZS01	94	4321	4077	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231137	GCA_000666805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/805/GCA_000666805.1_Myco_tube_MAL010134_V1	-	MAL010134
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.87727	37.9	-	MTRR01	13	2908	2823	5/11/17	5/23/17	Contig	FDA	SAMN06216090	GCA_002133295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/295/GCA_002133295.1_ASM213329v1	28464038	LS411
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.67363	30.4	-	MJVG01	28	1757	1551	10/4/16	4/21/17	Scaffold	University of California at Davis	SAMN03359145	GCA_001761605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/605/GCA_001761605.1_ASM176160v1	-	BCW_3788
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000181	1173424	PRJNA159273	159273	Proteobacteria	Gammaproteobacteria	4.71522	52.1	-	JREK01	107	4758	4472	9/5/14	2/26/17	Contig	FDA	SAMN00862053	GCA_000747825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/825/GCA_000747825.1_CFSAN000181_01.0	-	CFSAN000181
Staphylococcus aureus M0869	1388646	PRJNA216819	216819	Terrabacteria group	Firmicutes	2.93728	32.9	-	JCQR01	29	3083	2913	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325770	GCA_000544705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/705/GCA_000544705.1_Stap_aure_M0869_V1	-	M0869
Staphylococcus aureus M0872	1388648	PRJNA216821	216821	Terrabacteria group	Firmicutes	2.94514	32.9	-	JCQS01	40	3100	2922	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325772	GCA_000544725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/725/GCA_000544725.1_Stap_aure_M0872_V1	-	M0872
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000180	1173466	PRJNA159357	159357	Proteobacteria	Gammaproteobacteria	4.77493	52.2	-	JREL01	78	4884	4663	9/5/14	2/26/17	Contig	FDA	SAMN00862209	GCA_000747835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/835/GCA_000747835.1_CFSAN000180_01.0	-	CFSAN000180
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.80958	30.1	-	MJVK01	74	1893	1711	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03359149	GCA_001761645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/645/GCA_001761645.1_ASM176164v1	-	BCW_3792
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.94712	37.8	-	MTRQ01	22	2990	2911	5/11/17	5/23/17	Contig	FDA	SAMN02358134	GCA_002133315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/315/GCA_002133315.1_ASM213331v1	28464038	PNUSAL000194
Mycobacterium tuberculosis MAL010136	1354182	PRJNA211671	211671	Terrabacteria group	Actinobacteria	4.4212	65.6	-	JKZR01	5	4298	4128	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231138	GCA_000666825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/825/GCA_000666825.1_Myco_afri_MAL010136_V1	-	MAL010136
Escherichia coli HVH 196 (4-4530470)	1281123	PRJNA186222	186222	Proteobacteria	Gammaproteobacteria	5.0571	50.5	-	AVYW01	8	5220	4878	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885835	GCA_000458975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/975/GCA_000458975.1_Esch_coli_HVH_196_4-4530470_V1	-	HVH 196 (4-4530470)
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08366	39.7	-	CKPY01	58	2294	2088	3/21/15	3/11/17	Contig	SC	SAMEA1024583	GCA_001127925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/925/GCA_001127925.1_6680_6_13	-	SMRU949
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.48004	66.2	-	LLSY01	74	6285	6092	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128689	GCA_001452685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/685/GCA_001452685.1_WH-SGI-V-07704	26604259	WH-SGI-V-07704
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.04236	39	-	JWWY03	127	3940	3783	12/29/14	3/18/17	Contig	JCVI	SAMN03084774	GCA_000810685.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/685/GCA_000810685.3_ASM81068v3	-	UH17_182
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.63926	50.8	-	FUBT01	388	5216	4452	1/28/17	3/2/17	Scaffold	SC	SAMEA1569758	GCA_900160005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/005/GCA_900160005.1_8403_8_35	-	sh1419
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.12262	28.7	-	FUST01	54	3839	3579	2/14/17	2/23/17	Scaffold	SC	SAMEA2239411	GCA_900166005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/005/GCA_900166005.1_11670_1_63	-	CD60
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.66799	57.1	-	LNGT01	128	5833	5570	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158276	GCA_001462615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/615/GCA_001462615.1_ASM146261v1	-	K52-43
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.43379	64	-	FVNY01	20	5507	5338	3/10/17	3/18/17	Scaffold	SC	SAMEA2259615	GCA_900136995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/995/GCA_900136995.1_11861_7_75	-	810
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.09889	64.1	-	FSJW01	13	5112	5003	12/14/16	3/21/17	Scaffold	SC	SAMEA2259616	GCA_900137005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/005/GCA_900137005.1_11861_7_76	-	811
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.72482	57.1	-	LNGV01	140	5896	5620	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158278	GCA_001462645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/645/GCA_001462645.1_ASM146264v1	-	K53-64
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.12417	28.7	-	FUSU01	47	3846	3575	2/14/17	2/23/17	Scaffold	SC	SAMEA2239381	GCA_900166015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/015/GCA_900166015.1_11670_1_32	-	CD30
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.48867	50.8	-	FUBV01	366	5003	4256	1/28/17	2/26/17	Scaffold	SC	SAMEA1569901	GCA_900160015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/015/GCA_900160015.1_8403_8_30	-	sh1414
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.17552	38.9	-	JWWX01	156	-	-	-	-	Contig	JCVI	SAMN03084775	GCA_000810705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/705/GCA_000810705.1_ASM81070v1	-	UH149_188
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.79672	66.1	-	LLTA01	94	6577	6366	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128691	GCA_001452725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/725/GCA_001452725.1_WH-SGI-V-07706	26604259	WH-SGI-V-07706
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.05617	39.7	-	CLII01	54	2249	2024	3/21/15	3/11/17	Contig	SC	SAMEA1025810	GCA_001128045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/045/GCA_001128045.1_6925_6_22	-	SMRU2206
Escherichia coli HVH 197 (4-4466217)	1281124	PRJNA186223	186223	Proteobacteria	Gammaproteobacteria	5.57182	50.4	-	AVYX01	12	5672	5273	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885836	GCA_000458995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/458/995/GCA_000458995.1_Esch_coli_HVH_197_4-4466217_V1	-	HVH 197 (4-4466217)
Mycobacterium tuberculosis MAL020110	1354137	PRJNA211677	211677	Terrabacteria group	Actinobacteria	4.40768	65.6	-	JKZN01	6	4271	4097	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231144	GCA_000666885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/885/GCA_000666885.1_Myco_tube_MAL020110_V1	-	MAL020110
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.90114	37.9	-	MTRO01	34	2924	2846	5/11/17	5/23/17	Contig	FDA	SAMN04414046	GCA_002133345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/345/GCA_002133345.1_ASM213334v1	28464038	PNUSAL001927
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.75919	30.2	-	MJVL01	63	1835	1661	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03359151	GCA_001761665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/665/GCA_001761665.1_ASM176166v1	-	BCW_3794
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000182	1173462	PRJNA159349	159349	Proteobacteria	Gammaproteobacteria	4.73491	52.2	-	JREJ01	81	4851	4624	9/5/14	2/26/17	Contig	FDA	SAMN01942238	GCA_000747845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/845/GCA_000747845.1_CFSAN000182_01.0	-	CFSAN000182
Staphylococcus aureus M0875	1388651	PRJNA216824	216824	Terrabacteria group	Firmicutes	2.8603	32.8	-	JCQT01	45	3024	2854	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325775	GCA_000544745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/745/GCA_000544745.1_Stap_aure_M0875_V1	-	M0875
Staphylococcus aureus M0876	1388652	PRJNA216825	216825	Terrabacteria group	Firmicutes	2.89794	32.9	-	JCQU01	30	3049	2881	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325776	GCA_000544765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/765/GCA_000544765.1_Stap_aure_M0876_V1	-	M0876
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000184	1173473	PRJNA159371	159371	Proteobacteria	Gammaproteobacteria	4.62259	52.3	-	JREI01	55	4654	4449	9/5/14	2/26/17	Contig	FDA	SAMN01942261	GCA_000747885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/885/GCA_000747885.1_CFSAN000184_01.0	-	CFSAN000184
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.69904	30.6	-	MJVM01	31	1748	1596	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03359154	GCA_001761685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/685/GCA_001761685.1_ASM176168v1	-	BCW_3797
Listeria monocytogenes	1639	PRJNA327110	327110	Terrabacteria group	Firmicutes	2.84753	37.9	-	MBOF01	10	2873	2790	5/16/17	5/24/17	Contig	Health Canada	SAMN05301536	GCA_002144215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/215/GCA_002144215.1_ASM214421v1	-	HPB2863_1
Mycobacterium tuberculosis MAL020120	1354138	PRJNA211678	211678	Terrabacteria group	Actinobacteria	4.43307	65.5	-	JKZM01	11	4278	4107	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231145	GCA_000666905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/905/GCA_000666905.1_Myco_tube_MAL020120_V1	-	MAL020120
Escherichia coli HVH 198 (4-3206106)	1281125	PRJNA186224	186224	Proteobacteria	Gammaproteobacteria	5.0938	50.4	-	AVYY01	12	5248	4942	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885837	GCA_000459015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/015/GCA_000459015.1_Esch_coli_HVH_198_4-3206106_V1	-	HVH 198 (4-3206106)
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09365	39.5	-	CMIK01	41	2279	2050	3/23/15	3/4/17	Contig	SC	SAMEA1029212	GCA_001128165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/165/GCA_001128165.1_7038_6_9	-	SMRU2985
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.86631	66.1	-	LLTB01	87	6616	6382	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128692	GCA_001452745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/745/GCA_001452745.1_WH-SGI-V-07707	26604259	WH-SGI-V-07707
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.18815	39	-	JWWW03	118	4098	3963	12/29/14	3/18/17	Contig	JCVI	SAMN03084776	GCA_000810725.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/725/GCA_000810725.3_ASM81072v3	-	UH134_192
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.55595	50.8	-	FUBU01	388	5090	4344	1/28/17	2/26/17	Scaffold	SC	SAMEA1569791	GCA_900160025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/025/GCA_900160025.1_8403_8_33	-	sh1417
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.20892	29.3	-	FUSV01	59	3904	3714	2/14/17	2/23/17	Scaffold	SC	SAMEA2239400	GCA_900166025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/025/GCA_900166025.1_11670_1_52	-	CD49
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.66068	57.1	-	LNGU01	124	5812	5554	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158277	GCA_001462655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/655/GCA_001462655.1_ASM146265v1	-	K52-74
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.02537	64	-	FVOE01	13	5038	4879	3/10/17	3/18/17	Scaffold	SC	SAMEA2259632	GCA_900137015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/015/GCA_900137015.1_11861_7_87	-	827
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.8936	64.2	-	FVOC01	15	4871	4712	3/10/17	3/18/17	Scaffold	SC	SAMEA2259618	GCA_900137025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/025/GCA_900137025.1_11861_7_78	-	813
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.65521	57.1	-	LNGW01	123	5823	5558	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158279	GCA_001462685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/685/GCA_001462685.1_ASM146268v1	-	K54-05
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.21494	28.2	-	FUSY01	34	3925	3784	2/14/17	2/23/17	Scaffold	SC	SAMEA2239405	GCA_900166035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/035/GCA_900166035.1_11670_1_57	-	CD54
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.55659	50.8	-	FUBS01	393	5107	4373	1/28/17	3/2/17	Scaffold	SC	SAMEA1569880	GCA_900160035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/035/GCA_900160035.1_8403_8_31	-	sh1415
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.1977	39	-	JWWV03	156	4128	3985	12/29/14	3/18/17	Contig	JCVI	SAMN03084777	GCA_000810745.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/745/GCA_000810745.3_ASM81074v3	-	UH475_197
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.88475	65.7	-	LLTD01	117	6696	6477	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128694	GCA_001452755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/755/GCA_001452755.1_WH-SGI-V-07709	26604259	WH-SGI-V-07709
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.11194	39.5	-	CNTR02	264	2241	2046	3/23/15	3/11/17	Contig	SC	SAMEA1032706	GCA_001128185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/185/GCA_001128185.2_6999_5_1	-	147587
Escherichia coli HVH 199 (4-5670322)	1281126	PRJNA186225	186225	Proteobacteria	Gammaproteobacteria	5.18196	50.6	-	AVYZ01	5	5368	5049	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885838	GCA_000459035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/035/GCA_000459035.1_Esch_coli_HVH_199_4-5670322_V1	-	HVH 199 (4-5670322)
Mycobacterium tuberculosis MAL020130	1354192	PRJNA211679	211679	Terrabacteria group	Actinobacteria	4.42084	65.6	-	JKZL01	6	4282	4113	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231146	GCA_000666925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/925/GCA_000666925.1_Myco_afri_MAL020130_V1	-	MAL020130
Listeria monocytogenes	1639	PRJNA327110	327110	Terrabacteria group	Firmicutes	2.843	38.1	-	MBOG01	11	2868	2785	5/16/17	5/24/17	Contig	Health Canada	SAMN05301541	GCA_002144235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/235/GCA_002144235.1_ASM214423v1	-	HPB1631_1
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.74452	30.3	-	MJVN01	53	1811	1643	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03359155	GCA_001761705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/705/GCA_001761705.1_ASM176170v1	-	BCW_3798
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000219	1173442	PRJNA159309	159309	Proteobacteria	Gammaproteobacteria	4.65475	52.2	-	JRDF01	64	4719	4508	9/5/14	2/26/17	Contig	FDA	SAMN00989077	GCA_000747905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/905/GCA_000747905.1_CFSAN000219_01.0	-	CFSAN000219
Staphylococcus aureus M0878	1388653	PRJNA216826	216826	Terrabacteria group	Firmicutes	2.89704	32.9	-	JCQV01	24	3050	2880	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325777	GCA_000544785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/785/GCA_000544785.1_Stap_aure_M0878_V1	-	M0878
Staphylococcus aureus M0879	1388654	PRJNA216827	216827	Terrabacteria group	Firmicutes	2.87344	32.8	-	JCQW01	12	3008	2846	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325778	GCA_000544805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/805/GCA_000544805.1_Stap_aure_M0879_V1	-	M0879
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000221	1173450	PRJNA159325	159325	Proteobacteria	Gammaproteobacteria	4.9128	52	-	JRDE01	216	5068	4792	9/5/14	2/26/17	Contig	FDA	SAMN00989083	GCA_000747925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/925/GCA_000747925.1_CFSAN000221_01.0	-	CFSAN000221
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.76843	30.2	-	MJVO01	55	1840	1681	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03359156	GCA_001761725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/725/GCA_001761725.1_ASM176172v1	-	BCW_3799
Listeria monocytogenes	1639	PRJNA327110	327110	Terrabacteria group	Firmicutes	2.84373	38.1	-	MBOH01	12	2873	2785	5/16/17	5/24/17	Contig	Health Canada	SAMN05301543	GCA_002144255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/255/GCA_002144255.1_ASM214425v1	-	HPB1631_100
Mycobacterium tuberculosis MAL020131	1354139	PRJNA211680	211680	Terrabacteria group	Actinobacteria	4.41605	65.6	-	JKZK01	6	4284	4113	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231147	GCA_000666945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/945/GCA_000666945.1_Myco_tube_MAL020131_V1	-	MAL020131
Escherichia coli HVH 200 (4-4449924)	1281127	PRJNA186226	186226	Proteobacteria	Gammaproteobacteria	5.28663	50.7	-	AVZA01	15	5534	5127	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885839	GCA_000459055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/055/GCA_000459055.1_Esch_coli_HVH_200_4-4449924_V1	-	HVH 200 (4-4449924)
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.05447	39.6	-	CMRU01	48	2259	2036	3/22/15	3/4/17	Contig	SC	SAMEA2061947	GCA_001128325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/325/GCA_001128325.1_9803_8_5	-	9N
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.56751	65.3	-	LLTF01	305	7476	7106	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128696	GCA_001452765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/765/GCA_001452765.1_WH-SGI-V-07711	26604259	WH-SGI-V-07711
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.92358	38.8	-	JWWU01	115	-	-	-	-	Contig	JCVI	SAMN03084778	GCA_000810755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/755/GCA_000810755.1_ASM81075v1	-	UH149_200
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.54941	50.8	-	FUBQ01	406	4996	4330	1/28/17	2/26/17	Scaffold	SC	SAMEA1569886	GCA_900160045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/045/GCA_900160045.1_8403_8_32	-	sh1416
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.12779	28.5	-	FUSW01	42	3858	3703	2/14/17	2/23/17	Scaffold	SC	SAMEA2239357	GCA_900166045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/045/GCA_900166045.1_11670_1_6	-	CD06
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.90672	56.9	-	LNGX01	164	6013	5690	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158280	GCA_001462705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/705/GCA_001462705.1_ASM146270v1	-	K57-33
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.97301	64.1	-	FVOD01	15	4960	4798	3/10/17	3/18/17	Scaffold	SC	SAMEA2259638	GCA_900137035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/035/GCA_900137035.1_11861_7_93	-	833
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.92919	64.1	-	FSJX01	17	4928	4767	12/14/16	5/22/17	Scaffold	SC	SAMEA2259626	GCA_900137045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/045/GCA_900137045.1_11861_8_13	-	821
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.98189	56.6	-	LNGZ01	166	6127	5810	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158282	GCA_001462735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/735/GCA_001462735.1_ASM146273v1	-	K66-45
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.20413	29.3	-	FUSX01	59	3897	3722	2/14/17	2/23/17	Scaffold	SC	SAMEA2239380	GCA_900166055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/055/GCA_900166055.1_11670_1_30	-	CD29
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.54376	50.8	-	FUBX01	380	5058	4322	1/28/17	2/26/17	Scaffold	SC	SAMEA1569770	GCA_900160055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/055/GCA_900160055.1_8403_8_36	-	sh1420
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.04255	39	-	JWWT03	129	3952	3788	12/29/14	3/18/17	Contig	JCVI	SAMN03084779	GCA_000810765.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/765/GCA_000810765.3_ASM81076v3	-	UH17_202
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.61342	66.2	-	LLTI01	85	6320	6124	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128699	GCA_001452825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/825/GCA_001452825.1_WH-SGI-V-07248	26604259	WH-SGI-V-07248
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.09821	39.8	-	CMVM01	54	2248	1951	3/22/15	3/15/17	Contig	SC	SAMEA1022858	GCA_001128385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/385/GCA_001128385.1_5750_2_9	-	253
Escherichia coli HVH 201 (4-4459431)	1281128	PRJNA186228	186228	Proteobacteria	Gammaproteobacteria	5.20514	50.6	-	AVZB01	6	5426	5074	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885840	GCA_000459075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/075/GCA_000459075.1_Esch_coli_HVH_201_4-4459431_V1	-	HVH 201 (4-4459431)
Mycobacterium tuberculosis MAL020132	1354140	PRJNA211681	211681	Terrabacteria group	Actinobacteria	4.40219	65.6	-	JKZJ01	3	4274	4109	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231148	GCA_000666965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/666/965/GCA_000666965.1_Myco_tube_MAL020132_V1	-	MAL020132
Listeria monocytogenes	1639	PRJNA327110	327110	Terrabacteria group	Firmicutes	2.99891	37.8	-	MBOM01	18	3062	2973	5/16/17	5/24/17	Contig	Health Canada	SAMN05301559	GCA_002144315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/315/GCA_002144315.1_ASM214431v1	-	HPB1044_1
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.83298	30.3	-	MJVP01	70	1927	1746	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03359157	GCA_001761745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/745/GCA_001761745.1_ASM176174v1	-	BCW_3800
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000222	1173420	PRJNA159265	159265	Proteobacteria	Gammaproteobacteria	4.65039	52.2	-	JRDD01	155	4716	4489	9/5/14	2/26/17	Contig	FDA	SAMN00989075	GCA_000747945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/945/GCA_000747945.1_CFSAN000222_01.0	-	CFSAN000222
Staphylococcus aureus M0880	1388655	PRJNA216828	216828	Terrabacteria group	Firmicutes	2.86698	32.9	-	JCQX01	18	2997	2835	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325779	GCA_000544825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/825/GCA_000544825.1_Stap_aure_M0880_V1	-	M0880
Staphylococcus aureus M0883	1388657	PRJNA216830	216830	Terrabacteria group	Firmicutes	2.90008	32.9	-	JCQY01	24	3051	2888	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325781	GCA_000544845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/845/GCA_000544845.1_Stap_aure_M0883_V1	-	M0883
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000223	1173444	PRJNA159313	159313	Proteobacteria	Gammaproteobacteria	4.64883	52.2	-	JRDC01	62	4707	4499	9/5/14	2/26/17	Contig	FDA	SAMN00989081	GCA_000747965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/965/GCA_000747965.1_CFSAN000223_01.0	-	CFSAN000223
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.83623	30.2	-	MJVQ01	64	1930	1754	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03359158	GCA_001761765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/765/GCA_001761765.1_ASM176176v1	-	BCW_3802
Listeria monocytogenes	1639	PRJNA327110	327110	Terrabacteria group	Firmicutes	2.99925	37.8	-	MBON01	18	3063	2975	5/16/17	5/24/17	Contig	Health Canada	SAMN05301561	GCA_002144335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/335/GCA_002144335.1_ASM214433v1	-	HPB1044_100
Mycobacterium tuberculosis MAL020138	1354122	PRJNA211685	211685	Terrabacteria group	Actinobacteria	4.42278	65.5	-	JKZG01	3	4287	4118	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231152	GCA_000667025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/025/GCA_000667025.1_Myco_tube_MAL020138_V1	-	MAL020138
Escherichia coli HVH 202 (4-3163997)	1281129	PRJNA186229	186229	Proteobacteria	Gammaproteobacteria	5.34804	50.6	-	AVZC01	10	5563	5197	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885841	GCA_000459095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/095/GCA_000459095.1_Esch_coli_HVH_202_4-3163997_V1	-	HVH 202 (4-3163997)
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.15268	39.5	-	CMNX01	78	2431	2179	3/23/15	3/4/17	Contig	SC	SAMEA2061491	GCA_001128445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/445/GCA_001128445.1_9803_7_15	-	23A
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.78324	66	-	LLTO01	105	6546	6345	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128705	GCA_001452915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/915/GCA_001452915.1_WH-SGI-V-07254	26604259	WH-SGI-V-07254
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.15509	38.9	-	JWWS01	142	-	-	-	-	Contig	JCVI	SAMN03084780	GCA_000810775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/775/GCA_000810775.1_ASM81077v1	-	UH149_222
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.71933	50.6	-	FUBY01	457	5318	4513	1/28/17	2/26/17	Scaffold	SC	SAMEA1569837	GCA_900160075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/075/GCA_900160075.1_8403_8_38	-	sh1422
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	3.96176	28.4	-	FUSZ01	55	3656	3498	2/14/17	2/23/17	Scaffold	SC	SAMEA2239418	GCA_900166065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/065/GCA_900166065.1_11670_1_70	-	CD67
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.65731	57.1	-	LNHA01	112	5807	5558	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158283	GCA_001462765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/765/GCA_001462765.1_ASM146276v1	-	K66-62
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.66392	64.2	-	FSJY01	19	4601	4459	12/14/16	3/21/17	Scaffold	SC	SAMEA2259664	GCA_900137055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/055/GCA_900137055.1_11861_8_18	-	859
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.93011	64.1	-	FVOG01	13	4921	4774	3/10/17	3/18/17	Scaffold	SC	SAMEA2259627	GCA_900137065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/065/GCA_900137065.1_11861_8_14	-	822
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.68621	57.1	-	LNHB01	164	5852	5588	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158284	GCA_001462785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/785/GCA_001462785.1_ASM146278v1	-	K66-73
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.06875	28.3	-	FUTA01	28	3771	3630	2/14/17	2/23/17	Scaffold	SC	SAMEA2239417	GCA_900166075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/075/GCA_900166075.1_11670_1_69	-	CD66
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.6012	50.8	-	FUBZ01	387	5169	4399	1/28/17	2/26/17	Scaffold	SC	SAMEA1569908	GCA_900160085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/085/GCA_900160085.1_8403_8_40	-	sh1424
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.87597	38.9	-	JWWQ03	113	3748	3623	12/29/14	3/18/17	Contig	JCVI	SAMN03084782	GCA_000810825.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/825/GCA_000810825.3_ASM81082v3	-	UH66_241
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.52692	66.5	-	LLTU01	74	6221	5943	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128711	GCA_001452985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/985/GCA_001452985.1_WH-SGI-V-07261	26604259	WH-SGI-V-07261
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.15281	39.4	-	CMTR01	68	2345	2084	3/23/15	3/6/17	Contig	SC	SAMEA1022916	GCA_001128525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/525/GCA_001128525.1_5737_3_1	-	30949
Escherichia coli HVH 203 (4-3126218)	1281130	PRJNA186230	186230	Proteobacteria	Gammaproteobacteria	5.03095	50.5	-	AVZD01	3	5155	4834	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885842	GCA_000459115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/115/GCA_000459115.1_Esch_coli_HVH_203_4-3126218_V1	-	HVH 203 (4-3126218)
Mycobacterium tuberculosis MAL020141	1354123	PRJNA211686	211686	Terrabacteria group	Actinobacteria	4.43191	65.5	-	JKZF01	2	4287	4117	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231153	GCA_000667045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/045/GCA_000667045.1_Myco_tube_MAL020141_V1	-	MAL020141
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.91084	37.9	-	MSDN01	28	2948	2851	5/19/17	5/24/17	Contig	FDA/CFSAN	SAMN03462190	GCA_002149945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/149/945/GCA_002149945.1_ASM214994v1	-	CDPHFDLB-F14M01770.86-1
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.69361	30.7	-	MJVR01	19	1757	1622	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03359159	GCA_001761785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/785/GCA_001761785.1_ASM176178v1	-	BCW_3803
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000224	1173445	PRJNA159315	159315	Proteobacteria	Gammaproteobacteria	4.67536	52.2	-	JRDB01	173	4741	4489	9/5/14	2/26/17	Contig	FDA	SAMN01942308	GCA_000747985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/985/GCA_000747985.1_CFSAN000224_01.0	-	CFSAN000224
Staphylococcus aureus M0885	1388659	PRJNA216832	216832	Terrabacteria group	Firmicutes	2.94204	32.9	-	JCQZ01	37	3096	2925	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325783	GCA_000544865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/865/GCA_000544865.1_Stap_aure_M0885_V1	-	M0885
Staphylococcus aureus M0887	1388661	PRJNA216834	216834	Terrabacteria group	Firmicutes	2.93606	32.9	-	JCRA01	34	3100	2922	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325785	GCA_000544885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/885/GCA_000544885.1_Stap_aure_M0887_V1	-	M0887
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000225	1173446	PRJNA159317	159317	Proteobacteria	Gammaproteobacteria	4.61303	52.3	-	JRDA01	181	4681	4423	9/5/14	2/27/17	Contig	FDA	SAMN01816226	GCA_000748005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/005/GCA_000748005.1_CFSAN000225.0	-	CFSAN000225
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.80716	30.1	-	MJVS01	74	1894	1715	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03359160	GCA_001761805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/805/GCA_001761805.1_ASM176180v1	-	BCW_3805
Listeria monocytogenes	1639	PRJNA376487	376487	Terrabacteria group	Firmicutes	3.06179	37.9	-	MWLR01	119	3088	2968	5/22/17	5/24/17	Contig	Campden BRI	SAMN06434199	GCA_002156175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/175/GCA_002156175.1_ASM215617v1	-	NCTC 10887
Mycobacterium tuberculosis MAL020142	1354124	PRJNA211687	211687	Terrabacteria group	Actinobacteria	4.41434	65.6	-	JKZE01	7	4286	4123	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231154	GCA_000667065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/065/GCA_000667065.1_Myco_tube_MAL020142_V1	-	MAL020142
Escherichia coli HVH 204 (4-3112802)	1281131	PRJNA186231	186231	Proteobacteria	Gammaproteobacteria	4.89414	50.6	-	AVZE01	8	4938	4584	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885843	GCA_000459135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/135/GCA_000459135.1_Esch_coli_HVH_204_4-3112802_V1	-	HVH 204 (4-3112802)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05208	39.6	-	CODO02	122	2249	2033	3/22/15	3/11/17	Contig	SC	SAMEA1463132	GCA_001128565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/565/GCA_001128565.2_7622_4_26	-	LE4081
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.58702	65.6	-	LLTV01	64	7383	7137	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128712	GCA_001453015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/015/GCA_001453015.1_WH-SGI-V-07263	26604259	WH-SGI-V-07263
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.19898	39	-	JWWR03	156	4136	3980	12/29/14	3/18/17	Contig	JCVI	SAMN03084781	GCA_000810835.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/835/GCA_000810835.3_ASM81083v3	-	UH475_239
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.59314	50.8	-	FUCA01	380	5155	4383	1/28/17	3/2/17	Scaffold	SC	SAMEA1569842	GCA_900160095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/095/GCA_900160095.1_8403_8_39	-	sh1423
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.16877	28.5	-	FUTB01	44	3897	3765	2/14/17	2/23/17	Scaffold	SC	SAMEA2239375	GCA_900166085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/085/GCA_900166085.1_11670_1_25	-	CD24
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.59699	57.1	-	LNHD01	109	5722	5466	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158286	GCA_001462795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/795/GCA_001462795.1_ASM146279v1	-	K67-17
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.97285	64.1	-	FVOK01	11	4946	4807	3/10/17	3/18/17	Scaffold	SC	SAMEA2259639	GCA_900137075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/075/GCA_900137075.1_11893_6_1	-	834
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.12191	64.1	-	FVOH01	42	5204	4998	3/10/17	3/18/17	Scaffold	SC	SAMEA2259588	GCA_900137085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/085/GCA_900137085.1_11861_8_6	-	783
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.81865	56.7	-	LNHE01	97	5886	5601	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158287	GCA_001462825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/825/GCA_001462825.1_ASM146282v1	-	K68-18
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.1883	28.8	-	FUTC01	49	3906	3757	2/14/17	2/23/17	Scaffold	SC	SAMEA2239419	GCA_900166095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/095/GCA_900166095.1_11670_1_71	-	CD68
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.62959	50.7	-	FUCB01	389	5201	4439	1/28/17	2/26/17	Scaffold	SC	SAMEA1569888	GCA_900160105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/105/GCA_900160105.1_8403_8_41	-	sh1425
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.15085	39	-	JWWP03	138	4063	3925	12/29/14	3/18/17	Contig	JCVI	SAMN03084783	GCA_000810865.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/865/GCA_000810865.3_ASM81086v3	-	UH507_247
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.25704	66.5	-	LLUI01	56	5937	5787	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128725	GCA_001453075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/075/GCA_001453075.1_WH-SGI-V-071082	26604259	WH-SGI-V-07282
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05169	39.5	-	CNNR02	179	2217	1991	3/22/15	3/11/17	Contig	SC	SAMEA1032617	GCA_001128585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/585/GCA_001128585.2_6925_1_61	-	R34-3043
Escherichia coli HVH 205 (4-3094677)	1281132	PRJNA186232	186232	Proteobacteria	Gammaproteobacteria	5.38792	50.7	-	AVZF01	13	5654	5308	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885844	GCA_000459155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/155/GCA_000459155.1_Esch_coli_HVH_205_4-3094677_V1	-	HVH 205 (4-3094677)
Mycobacterium tuberculosis MAL020144	1354125	PRJNA211688	211688	Terrabacteria group	Actinobacteria	4.41612	65.6	-	JKZD01	4	4289	4112	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231155	GCA_000667085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/085/GCA_000667085.1_Myco_tube_MAL020144_V1	-	MAL020144
Listeria monocytogenes serotype 4b str. NCTC 11994	1344576	PRJNA376487	376487	Terrabacteria group	Firmicutes	2.96204	37.9	-	MWLS01	36	3036	2945	5/22/17	5/24/17	Contig	Campden BRI	SAMN06434198	GCA_002156185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/185/GCA_002156185.1_ASM215618v1	-	NCTC 11994
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.80965	30.1	-	MJVI01	75	1906	1715	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03359147	GCA_001761865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/865/GCA_001761865.1_ASM176186v1	-	BCW_3790
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001112	1208629	PRJNA170562	170562	Proteobacteria	Gammaproteobacteria	4.76352	52.2	-	JRBL01	110	4832	4598	9/5/14	2/26/17	Contig	FDA	SAMN01816358	GCA_000748025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/025/GCA_000748025.1_CFSAN001112_01.0	-	CFSAN001112
Staphylococcus aureus M0889	1388663	PRJNA216836	216836	Terrabacteria group	Firmicutes	2.86954	32.9	-	JCRB01	15	3006	2839	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325787	GCA_000544905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/905/GCA_000544905.1_Stap_aure_M0889_V1	-	M0889
Staphylococcus aureus M0890	1388664	PRJNA216837	216837	Terrabacteria group	Firmicutes	2.85812	32.8	-	JCRC01	23	2990	2848	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325788	GCA_000544925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/925/GCA_000544925.1_Stap_aure_M0890_V1	-	M0890
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001115	1208630	PRJNA170563	170563	Proteobacteria	Gammaproteobacteria	4.76316	52.2	-	JRBK01	102	4823	4596	9/5/14	2/26/17	Contig	FDA	SAMN01816359	GCA_000748045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/045/GCA_000748045.1_CFSAN001115_01.0	-	CFSAN001115
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.82774	30.3	-	MJVU01	67	1924	1750	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03359162	GCA_001761885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/885/GCA_001761885.1_ASM176188v1	-	BCW_3810
Listeria monocytogenes	1639	PRJNA212117	212117	Terrabacteria group	Firmicutes	2.89336	37.9	-	NKVT01	18	2912	2819	7/20/17	9/19/17	Contig	"Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention"	SAMN03265979	GCA_002222685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/222/685/GCA_002222685.1_ASM222268v1	28883140	PNUSAL001228
Mycobacterium tuberculosis MAL020145	1354126	PRJNA211689	211689	Terrabacteria group	Actinobacteria	4.42818	65.5	-	JKZC01	4	4276	4107	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231156	GCA_000667105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/105/GCA_000667105.1_Myco_tube_MAL020145_V1	-	MAL020145
Escherichia coli HVH 206 (4-3128229)	1281133	PRJNA186233	186233	Proteobacteria	Gammaproteobacteria	5.28071	50.6	-	AVZG01	11	5466	5183	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885845	GCA_000459175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/175/GCA_000459175.1_Esch_coli_HVH_206_4-3128229_V1	-	HVH 206 (4-3128229)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.98736	39.8	-	CNZE02	145	2156	1931	3/22/15	3/11/17	Contig	SC	SAMEA1463106	GCA_001128605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/605/GCA_001128605.2_7553_5_60	-	NP7118
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.38442	66.4	-	LLPD01	42	6114	5955	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128590	GCA_001453095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/095/GCA_001453095.1_WH-SGI-V-07416	26604259	WH-SGI-V-07416
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.1642	39	-	JWWO03	198	4105	3927	12/29/14	3/18/17	Contig	JCVI	SAMN03084785	GCA_000810875.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/875/GCA_000810875.3_ASM81087v3	-	UH507_263
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.63687	50.8	-	FUCC01	396	5202	4449	1/28/17	2/26/17	Scaffold	SC	SAMEA1569861	GCA_900160125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/125/GCA_900160125.1_8403_8_43	-	sh1427
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.2511	28.2	-	FUTD01	35	3984	3855	2/14/17	2/23/17	Scaffold	SC	SAMEA2239391	GCA_900166105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/105/GCA_900166105.1_11670_1_42	-	CD40
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.76982	56.8	-	LNHF01	88	5802	5555	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158288	GCA_001462845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/845/GCA_001462845.1_ASM146284v1	-	K68-73
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.20306	64.1	-	FVOJ01	26	5312	5063	3/10/17	3/18/17	Scaffold	SC	SAMEA2259591	GCA_900137095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/095/GCA_900137095.1_11861_8_9	-	786
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.92024	64.1	-	FVON01	17	4903	4738	3/10/17	3/18/17	Scaffold	SC	SAMEA2259677	GCA_900137105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/105/GCA_900137105.1_11893_6_36	-	872
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.71269	57.1	-	LNHH01	145	5865	5581	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158290	GCA_001462865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/865/GCA_001462865.1_ASM146286v1	-	50518740
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.25431	28.2	-	FUTE01	32	3990	3861	2/14/17	2/23/17	Scaffold	SC	SAMEA2239396	GCA_900166115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/115/GCA_900166115.1_11670_1_48	-	CD45
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.52492	50.8	-	FUCG01	365	5101	4332	1/28/17	2/26/17	Scaffold	SC	SAMEA1569850	GCA_900160135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/135/GCA_900160135.1_8403_8_44	-	sh1428
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.8734	38.8	-	JWWN03	98	3741	3613	12/29/14	3/18/17	Contig	JCVI	SAMN03084786	GCA_000810905.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/905/GCA_000810905.3_ASM81090v3	-	UH66_268
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.79193	66.2	-	LLPF01	167	6552	6317	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128592	GCA_001453125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/125/GCA_001453125.1_WH-SGI-V-07418	26604259	WH-SGI-V-07418
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	1.98933	39.8	-	CPUJ01	73	2193	1968	3/22/15	3/4/17	Contig	SC	SAMEA682580	GCA_001128665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/665/GCA_001128665.1_5477_6_7	-	M01_0087
Escherichia coli HVH 207 (4-3113221)	1281134	PRJNA186234	186234	Proteobacteria	Gammaproteobacteria	5.24221	50.5	-	AVZH01	8	5342	5011	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885846	GCA_000459195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/195/GCA_000459195.1_Esch_coli_HVH_207_4-3113221_V1	-	HVH 207 (4-3113221)
Mycobacterium tuberculosis MAL020146	1354127	PRJNA211690	211690	Terrabacteria group	Actinobacteria	4.41711	65.6	-	JKZB01	4	4286	4117	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231157	GCA_000667125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/125/GCA_000667125.1_Myco_tube_MAL020146_V1	-	MAL020146
Listeria monocytogenes	1639	PRJNA212117	212117	Terrabacteria group	Firmicutes	2.89219	37.9	-	NKVU01	16	2912	2818	7/20/17	9/19/17	Contig	"Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention"	SAMN03265978	GCA_002222695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/222/695/GCA_002222695.1_ASM222269v1	28883140	PNUSAL001227
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.68996	30.5	-	MJVV01	29	1755	1630	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03357962	GCA_001761905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/905/GCA_001761905.1_ASM176190v1	-	BCW_4216
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001118	1208622	PRJNA170555	170555	Proteobacteria	Gammaproteobacteria	4.76468	52.2	-	JRBJ01	69	4823	4603	9/5/14	2/26/17	Contig	FDA	SAMN01816351	GCA_000748065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/065/GCA_000748065.1_CFSAN001118_01.0	-	CFSAN001118
Staphylococcus aureus M0891	1388665	PRJNA216838	216838	Terrabacteria group	Firmicutes	2.95238	32.9	-	JCRD01	17	3106	2915	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325789	GCA_000544945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/945/GCA_000544945.1_Stap_aure_M0891_V1	-	M0891
Staphylococcus aureus M0893	1388666	PRJNA216839	216839	Terrabacteria group	Firmicutes	2.93784	32.7	-	JCRE01	79	3125	2970	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325790	GCA_000544965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/965/GCA_000544965.1_Stap_aure_M0893_V1	-	M0893
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001140	1208623	PRJNA170556	170556	Proteobacteria	Gammaproteobacteria	4.76375	52.2	-	JRBI01	147	4839	4602	9/5/14	2/27/17	Contig	FDA	SAMN01816352	GCA_000748085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/085/GCA_000748085.1_CFSAN001140_01.0	-	CFSAN001140
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.68099	30.5	-	MJWH01	29	1751	1647	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03357969	GCA_001762145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/145/GCA_001762145.1_ASM176214v1	-	BCW_4224
Listeria monocytogenes	1639	PRJNA212117	212117	Terrabacteria group	Firmicutes	2.89349	37.9	-	NKVS01	19	2914	2819	7/20/17	9/19/17	Contig	"Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention"	SAMN03265980	GCA_002222705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/222/705/GCA_002222705.1_ASM222270v1	28883140	PNUSAL001229
Mycobacterium tuberculosis MAL020147	1354128	PRJNA211691	211691	Terrabacteria group	Actinobacteria	4.41201	65.6	-	JKZA01	4	4292	4112	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231158	GCA_000667145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/145/GCA_000667145.1_Myco_tube_MAL020147_V1	-	MAL020147
Escherichia coli HVH 208 (4-3112292)	1281135	PRJNA186235	186235	Proteobacteria	Gammaproteobacteria	5.37793	50.7	-	AVZI01	14	5649	5332	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885847	GCA_000459215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/215/GCA_000459215.1_Esch_coli_HVH_208_4-3112292_V1	-	HVH 208 (4-3112292)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12687	39.6	-	COBH02	183	2324	2099	3/22/15	3/5/17	Contig	SC	SAMEA1463254	GCA_001128765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/765/GCA_001128765.2_7622_2_4	-	BR1012
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.40222	66.5	-	LLPH01	72	6083	5866	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128594	GCA_001453145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/145/GCA_001453145.1_WH-SGI-V-07420	26604259	WH-SGI-V-07420
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.86662	38.9	-	JWTV03	192	3763	3616	12/29/14	3/18/17	Contig	JCVI	SAMN03084863	GCA_000810915.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/915/GCA_000810915.3_ASM81091v3	-	UH195_568
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.52579	50.8	-	FUCH01	375	5087	4306	1/28/17	2/26/17	Scaffold	SC	SAMEA1569942	GCA_900160145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/145/GCA_900160145.1_8403_8_45	-	sh1429
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.44322	28.5	-	FUTG01	34	4222	4041	2/14/17	2/23/17	Scaffold	SC	SAMEA2239356	GCA_900166125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/125/GCA_900166125.1_11670_1_5	-	CD05
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	6.03037	56.2	-	LNHI01	115	6147	5832	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158291	GCA_001462885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/885/GCA_001462885.1_ASM146288v1	-	50531633
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.05636	64.1	-	FVOM01	16	5066	4955	3/10/17	3/18/17	Scaffold	SC	SAMEA2259641	GCA_900137115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/115/GCA_900137115.1_11893_6_3	-	836
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21598	64	-	FSJZ01	13	5268	5148	12/14/16	3/22/17	Scaffold	SC	SAMEA2275807	GCA_900137125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/125/GCA_900137125.1_12045_8_44	-	1081
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.83334	56.9	-	LNHJ01	170	5838	5582	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158292	GCA_001462905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/905/GCA_001462905.1_ASM146290v1	-	50572569
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.29311	28.5	-	FUTF01	41	4052	3898	2/14/17	2/23/17	Scaffold	SC	SAMEA2239376	GCA_900166135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/135/GCA_900166135.1_11670_1_26	-	CD25
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.79444	50.7	-	FUCF01	407	5352	4653	1/28/17	2/26/17	Scaffold	SC	SAMEA1569936	GCA_900160155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/155/GCA_900160155.1_8403_8_46	-	sh1430
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.9542	39	-	JWTU03	208	3856	3679	12/29/14	3/18/17	Contig	JCVI	SAMN03084864	GCA_000810935.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/935/GCA_000810935.3_ASM81093v3	-	UH355_569
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.07814	65.6	-	LLPY01	117	6853	6611	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128611	GCA_001453185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/185/GCA_001453185.1_WH-SGI-V-07492	26604259	WH-SGI-V-07492
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10111	39.7	-	CLEE01	85	2344	2122	3/21/15	3/11/17	Contig	SC	SAMEA1025885	GCA_001128825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/825/GCA_001128825.1_6899_5_8	-	SMRU2048
Escherichia coli HVH 209 (4-3062651)	1281136	PRJNA186236	186236	Proteobacteria	Gammaproteobacteria	4.6448	50.7	-	AVZJ01	4	4681	4401	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885848	GCA_000459235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/235/GCA_000459235.1_Esch_coli_HVH_209_4-3062651_V1	-	HVH 209 (4-3062651)
Mycobacterium tuberculosis MAL020150	1354129	PRJNA211692	211692	Terrabacteria group	Actinobacteria	4.41608	65.5	-	JKYZ01	4	4281	4115	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231159	GCA_000667165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/165/GCA_000667165.1_Myco_tube_MAL020150_V1	-	MAL020150
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.89823	37.9	-	NKVV01	29	2914	2820	7/20/17	9/19/17	Contig	FDA/CFSAN	SAMN03339955	GCA_002222715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/222/715/GCA_002222715.1_ASM222271v1	28883140	WAPHL_LIS_A00034
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.66018	30.6	-	MJWI01	33	1710	1595	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03357966	GCA_001762165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/165/GCA_001762165.1_ASM176216v1	-	BCW_4221
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000194	1173460	PRJNA159345	159345	Proteobacteria	Gammaproteobacteria	4.65362	52.3	-	JREA01	68	4690	4468	9/5/14	2/26/17	Contig	FDA	SAMN01942314	GCA_000748105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/105/GCA_000748105.1_CFSAN000194_01.0	-	CFSAN000194
Staphylococcus aureus M0894	1388667	PRJNA216840	216840	Terrabacteria group	Firmicutes	2.92982	32.7	-	JCRF01	80	3117	2967	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325791	GCA_000544985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/544/985/GCA_000544985.1_Stap_aure_M0894_V1	-	M0894
Staphylococcus aureus M0895	1388668	PRJNA216841	216841	Terrabacteria group	Firmicutes	2.91337	32.9	-	JCRG01	60	3079	2892	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325792	GCA_000545005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/005/GCA_000545005.1_Stap_aure_M0895_V1	-	M0895
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000195	1173476	PRJNA159377	159377	Proteobacteria	Gammaproteobacteria	4.56905	52.3	-	JRDZ01	274	4730	4377	9/5/14	2/27/17	Contig	FDA	SAMN01942250	GCA_000748125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/125/GCA_000748125.1_CFSAN000195_01.0	-	CFSAN000195
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.94273	30.2	-	MJWN01	55	2063	1855	10/4/16	4/10/17	Scaffold	University of California at Davis	SAMN03358126	GCA_001762255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/255/GCA_001762255.1_BCW_4459	-	BCW_4459
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.89956	37.9	-	NKVW01	32	2913	2819	7/20/17	9/19/17	Contig	FDA/CFSAN	SAMN03339954	GCA_002222765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/222/765/GCA_002222765.1_ASM222276v1	28883140	WAPHL_LIS_A00033
Mycobacterium tuberculosis MAL020152	1354130	PRJNA211693	211693	Terrabacteria group	Actinobacteria	4.41286	65.6	-	JKYY01	10	4283	4115	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231160	GCA_000667185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/185/GCA_000667185.1_Myco_tube_MAL020152_V1	-	MAL020152
Escherichia coli HVH 210 (4-3042480)	1281137	PRJNA186237	186237	Proteobacteria	Gammaproteobacteria	5.18096	50.6	-	AVZK01	10	5387	5074	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885849	GCA_000459255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/255/GCA_000459255.1_Esch_coli_HVH_210_4-3042480_V1	-	HVH 210 (4-3042480)
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.03516	39.7	-	CLWL01	72	2246	2024	3/21/15	3/10/17	Contig	SC	SAMEA1026238	GCA_001128945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/945/GCA_001128945.1_6983_4_90	-	SMRU2298
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.76241	66.1	-	LLQF01	95	6438	6235	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128618	GCA_001453205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/205/GCA_001453205.1_WH-SGI-V-07499	26604259	WH-SGI-V-07499
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.86353	38.9	-	JWTT03	204	3765	3618	12/29/14	3/18/17	Contig	JCVI	SAMN03084865	GCA_000810945.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/945/GCA_000810945.3_ASM81094v3	-	UH195_573
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.63295	50.7	-	FUCD01	350	5171	4457	1/28/17	2/26/17	Scaffold	SC	SAMEA1569917	GCA_900160165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/165/GCA_900160165.1_8403_8_48	-	sh1432
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.10441	28.6	-	FUTH01	30	3811	3671	2/14/17	2/23/17	Scaffold	SC	SAMEA2239383	GCA_900166145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/145/GCA_900166145.1_11670_1_34	-	CD32
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.50348	57.3	-	LNHO01	78	5581	5335	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158297	GCA_001462965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/965/GCA_001462965.1_ASM146296v1	-	50625602
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.19744	64.1	-	FSKA01	14	5262	5096	12/14/16	3/21/17	Scaffold	SC	SAMEA2275631	GCA_900137145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/145/GCA_900137145.1_12078_1_66	-	1169
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.19935	64.1	-	FVOS01	22	5262	5095	3/10/17	3/18/17	Scaffold	SC	SAMEA2275633	GCA_900137155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/155/GCA_900137155.1_12078_1_68	-	1171
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.73817	57.1	-	LNHG01	192	5889	5626	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158289	GCA_001463055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/055/GCA_001463055.1_ASM146305v1	-	50509588
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.12507	28.5	-	FUTI01	43	3823	3695	2/14/17	2/23/17	Scaffold	SC	SAMEA2239372	GCA_900166155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/155/GCA_900166155.1_11670_1_22	-	CD21
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.70344	50.8	-	FUCI01	400	5310	4516	1/28/17	2/26/17	Scaffold	SC	SAMEA1569929	GCA_900160175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/175/GCA_900160175.1_8403_8_47	-	sh1431
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.93441	39.1	-	JWTS03	285	3824	3643	12/29/14	3/18/17	Contig	JCVI	SAMN03084869	GCA_000810985.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/985/GCA_000810985.3_ASM81098v3	-	UH588_656
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.42034	66.4	-	LLQH01	81	6082	5929	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128620	GCA_001453225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/225/GCA_001453225.1_WH-SGI-V-07501	26604259	WH-SGI-V-07501
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.04999	39.6	-	CMPR01	66	2258	2025	3/23/15	3/10/17	Contig	SC	SAMEA2061727	GCA_001128965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/965/GCA_001128965.1_9803_7_64	-	9N
Escherichia coli HVH 211 (4-3041891)	1281138	PRJNA186238	186238	Proteobacteria	Gammaproteobacteria	5.21854	50.5	-	AVZL01	16	5402	5087	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885850	GCA_000459275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/275/GCA_000459275.1_Esch_coli_HVH_211_4-3041891_V1	-	HVH 211 (4-3041891)
Mycobacterium tuberculosis MAL020156	1354131	PRJNA211694	211694	Terrabacteria group	Actinobacteria	4.42593	65.5	-	JKYX01	27	4295	4117	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231161	GCA_000667205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/205/GCA_000667205.1_Myco_tube_MAL020156_V1	-	MAL020156
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.89598	37.9	-	NKVY01	24	2914	2821	7/20/17	9/19/17	Contig	FDA/CFSAN	SAMN03339952	GCA_002222775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/222/775/GCA_002222775.1_ASM222277v1	28883140	WAPHL_LIS_A00031
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.73139	30.4	-	MJWO01	28	1835	1619	10/4/16	4/21/17	Scaffold	University of California at Davis	SAMN03359142	GCA_001762285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/285/GCA_001762285.1_ASM176228v1	-	BCW_3785
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000196	1173430	PRJNA159285	159285	Proteobacteria	Gammaproteobacteria	4.77986	52.2	-	JRDY01	77	4886	4657	9/5/14	2/26/17	Contig	FDA	SAMN01942240	GCA_000748145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/145/GCA_000748145.1_CFSAN000196_01.0	-	CFSAN000196
Staphylococcus aureus M0897	1388670	PRJNA216843	216843	Terrabacteria group	Firmicutes	2.89329	32.8	-	JCRH01	55	3059	2880	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325794	GCA_000545025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/025/GCA_000545025.1_Stap_aure_M0897_V1	-	M0897
Staphylococcus aureus M0898	1388671	PRJNA216844	216844	Terrabacteria group	Firmicutes	2.86208	32.9	-	JCRI01	35	3015	2849	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325795	GCA_000545045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/045/GCA_000545045.1_Stap_aure_M0898_V1	-	M0898
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000198	1173452	PRJNA159329	159329	Proteobacteria	Gammaproteobacteria	4.57477	52.3	-	JRDX01	93	4615	4396	9/5/14	2/26/17	Contig	FDA	SAMN01942294	GCA_000748165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/165/GCA_000748165.1_CFSAN000198_01.0	-	CFSAN000198
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.80888	30.1	-	MJWP01	76	1902	1720	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03359143	GCA_001762305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/305/GCA_001762305.1_ASM176230v1	-	BCW_3786
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.89814	37.9	-	NKVX01	28	2912	2819	7/20/17	9/19/17	Contig	FDA/CFSAN	SAMN03339953	GCA_002222785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/222/785/GCA_002222785.1_ASM222278v1	28883140	WAPHL_LIS_A00032
Mycobacterium tuberculosis MAL020157	1354132	PRJNA211695	211695	Terrabacteria group	Actinobacteria	4.41008	65.6	-	JKYW01	2	4287	4116	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231162	GCA_000667225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/225/GCA_000667225.1_Myco_tube_MAL020157_V1	-	MAL020157
Escherichia coli HVH 212 (3-9305343)	1281139	PRJNA186239	186239	Proteobacteria	Gammaproteobacteria	5.40546	50.3	-	AVZM01	20	5584	5173	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885851	GCA_000459295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/295/GCA_000459295.1_Esch_coli_HVH_212_3-9305343_V1	-	HVH 212 (3-9305343)
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15222	39.5	-	CKKW01	43	2395	2168	3/21/15	3/10/17	Contig	SC	SAMEA1024187	GCA_001128985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/985/GCA_001128985.1_6631_7_7	-	23F
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.5909	66.3	-	LLQM01	56	6315	6146	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128625	GCA_001453265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/265/GCA_001453265.1_WH-SGI-V-07506	26604259	WH-SGI-V-07506
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.80536	38.9	-	JWTR03	253	3676	3433	12/29/14	3/18/17	Contig	JCVI	SAMN03084870	GCA_000810995.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/810/995/GCA_000810995.3_ASM81099v3	-	UH392_659
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.48135	50.8	-	FUCJ01	379	4980	4252	1/28/17	2/26/17	Scaffold	SC	SAMEA1569915	GCA_900160185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/185/GCA_900160185.1_8403_8_49	-	sh1433
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.22386	28.5	-	FUTJ01	46	3976	3818	2/14/17	2/23/17	Scaffold	SC	SAMEA2239389	GCA_900166165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/165/GCA_900166165.1_11670_1_40	-	CD38
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.58684	57.2	-	LNHK01	111	5619	5395	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158293	GCA_001463085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/085/GCA_001463085.1_ASM146308v1	-	50580255
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.19953	64.1	-	FVOP01	15	5259	5095	3/10/17	3/18/17	Scaffold	SC	SAMEA2275632	GCA_900137165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/165/GCA_900137165.1_12078_1_67	-	1170
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.05111	64.3	-	FVOL01	19	4998	4867	3/10/17	3/18/17	Scaffold	SC	SAMEA2275627	GCA_900137175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/175/GCA_900137175.1_12078_1_62	-	1165
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.47121	57.3	-	LNHN01	191	5560	5308	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158296	GCA_001463105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/105/GCA_001463105.1_ASM146310v1	-	50606221
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.30727	28.6	-	FUTK01	28	4072	3925	2/14/17	2/23/17	Scaffold	SC	SAMEA2239393	GCA_900166175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/175/GCA_900166175.1_11670_1_45	-	CD42
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.628	50.8	-	FUCL01	450	5041	4400	1/28/17	2/26/17	Scaffold	SC	SAMEA1569981	GCA_900160195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/195/GCA_900160195.1_8403_8_50	-	sh1434
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.93863	39	-	JWTP03	204	3868	3676	12/29/14	3/18/17	Contig	JCVI	SAMN03084874	GCA_000811005.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/005/GCA_000811005.3_ASM81100v3	-	UH175_677
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.33336	66.1	-	LLQN01	64	6025	5804	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128626	GCA_001453285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/285/GCA_001453285.1_WH-SGI-V-07507	26604259	WH-SGI-V-07507
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.9981	39.7	-	CNVM02	123	2149	1963	3/23/15	3/11/17	Contig	SC	SAMEA1032655	GCA_001129025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/025/GCA_001129025.2_6999_7_17	-	386329
Escherichia coli HVH 213 (4-3042928)	1281140	PRJNA186240	186240	Proteobacteria	Gammaproteobacteria	5.44816	50.7	-	AVZN01	14	5707	5315	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885852	GCA_000459315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/315/GCA_000459315.1_Esch_coli_HVH_213_4-3042928_V1	-	HVH 213 (4-3042928)
Mycobacterium tuberculosis MAL020160	1354133	PRJNA211696	211696	Terrabacteria group	Actinobacteria	4.4296	65.4	-	JKYV01	4	4296	4101	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231163	GCA_000667245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/245/GCA_000667245.1_Myco_tube_MAL020160_V1	-	MAL020160
Listeria monocytogenes	1639	PRJEB8942	324209	Terrabacteria group	Firmicutes	2.938	37.9	-	FJMS01	44	3003	2826	6/2/16	3/1/17	Contig	JUSTUS LIEBIG UNIVERSITY	SAMEA3878256	GCA_900064405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/405/GCA_900064405.1_ILCC025_Lm_131_LargeContigs	-	-
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.65845	30.6	-	MJXA01	23	1728	1585	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03360160	GCA_001762555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/555/GCA_001762555.1_ASM176255v1	-	BCW_6451
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000199	1173431	PRJNA159287	159287	Proteobacteria	Gammaproteobacteria	4.6596	52.2	-	JRDW01	81	4731	4510	9/5/14	2/27/17	Contig	FDA	SAMN01942281	GCA_000748185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/185/GCA_000748185.1_CFSAN000199_01.0	-	CFSAN000199
Staphylococcus aureus M0899	1388672	PRJNA216845	216845	Terrabacteria group	Firmicutes	2.89225	32.8	-	JCRJ01	24	3052	2890	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325796	GCA_000545065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/065/GCA_000545065.1_Stap_aure_M0899_V1	-	M0899
Staphylococcus aureus M0901	1388673	PRJNA216846	216846	Terrabacteria group	Firmicutes	2.85427	32.8	-	JCRK01	44	3000	2831	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325797	GCA_000545085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/085/GCA_000545085.1_Stap_aure_M0901_V1	-	M0901
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000201	1173432	PRJNA159289	159289	Proteobacteria	Gammaproteobacteria	4.84745	52.2	-	JRDV01	109	4946	4695	9/5/14	2/26/17	Contig	FDA	SAMN00862073	GCA_000748205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/205/GCA_000748205.1_CFSAN000201.0	-	CFSAN000201
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.65739	30.6	-	MJXB01	25	1732	1590	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03360161	GCA_001762575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/575/GCA_001762575.1_ASM176257v1	-	BCW_6452
Listeria monocytogenes	1639	PRJEB8942	324209	Terrabacteria group	Firmicutes	2.93937	37.9	-	FJMU01	48	3006	2842	6/2/16	3/1/17	Contig	JUSTUS LIEBIG UNIVERSITY	SAMEA3878258	GCA_900064415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/415/GCA_900064415.1_ILCC042_Lm_42_LargeContigs.fna	-	-
Mycobacterium tuberculosis MAL020162	1354134	PRJNA211697	211697	Terrabacteria group	Actinobacteria	4.41994	65.5	-	JKYU01	5	4287	4120	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231164	GCA_000667265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/265/GCA_000667265.1_Myco_tube_MAL020162_V1	-	MAL020162
Escherichia coli HVH 215 (4-3008371)	1281142	PRJNA186242	186242	Proteobacteria	Gammaproteobacteria	5.3064	50.7	-	AVZO01	5	5527	5208	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885854	GCA_000459335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/335/GCA_000459335.1_Esch_coli_HVH_215_4-3008371_V1	-	HVH 215 (4-3008371)
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.00389	39.7	-	CKHJ01	74	2203	1965	3/21/15	3/11/17	Contig	SC	SAMEA1023948	GCA_001129125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/125/GCA_001129125.1_6631_2_18	-	3
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.54594	66.4	-	LLQR01	58	6208	6045	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128630	GCA_001453305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/305/GCA_001453305.1_WH-SGI-V-07620	26604259	WH-SGI-V-07620
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.83972	38.9	-	JWTO03	116	3702	3568	12/29/14	3/18/17	Contig	JCVI	SAMN03084875	GCA_000811015.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/015/GCA_000811015.3_ASM81101v3	-	UH175_679
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.68698	50.8	-	FUCN01	374	5259	4512	1/28/17	2/26/17	Scaffold	SC	SAMEA1569999	GCA_900160215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/215/GCA_900160215.1_8403_8_52	-	sh1436
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.21549	28.5	-	FUTL01	41	3955	3790	2/14/17	2/23/17	Scaffold	SC	SAMEA2239402	GCA_900166185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/185/GCA_900166185.1_11670_1_54	-	CD51
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	6.09501	56.5	-	LNHP01	168	6242	5967	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158298	GCA_001463125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/125/GCA_001463125.1_ASM146312v1	-	50627996
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15312	64.1	-	FVOO01	5	5252	5078	3/10/17	3/18/17	Scaffold	SC	SAMEA2275635	GCA_900137185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/185/GCA_900137185.1_12078_1_70	-	1173
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.30386	64.1	-	FSKB01	20	5413	5268	12/14/16	3/21/17	Scaffold	SC	SAMEA2275755	GCA_900137205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/205/GCA_900137205.1_12082_5_66	-	1029
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.95059	57.2	-	LNHV01	206	5978	5569	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158304	GCA_001463185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/185/GCA_001463185.1_ASM146318v1	-	50667959
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.03222	28.3	-	FUTM01	28	3709	3582	2/14/17	2/23/17	Scaffold	SC	SAMEA2239385	GCA_900166195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/195/GCA_900166195.1_11670_1_36	-	CD34
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.65384	50.8	-	FUCP01	377	5221	4479	1/28/17	2/26/17	Scaffold	SC	SAMEA1569990	GCA_900160235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/235/GCA_900160235.1_8403_8_54	-	sh1438
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.97547	39	-	JWTQ03	177	3847	3688	12/29/14	3/18/17	Contig	JCVI	SAMN03084871	GCA_000811065.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/065/GCA_000811065.3_ASM81106v3	-	UH588_663
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.42263	66.4	-	LLQU01	64	6094	5927	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128633	GCA_001453315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/315/GCA_001453315.1_WH-SGI-V-07623	26604259	WH-SGI-V-07623
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05586	39.6	-	COCF02	219	2176	1975	3/23/15	3/11/17	Contig	SC	SAMEA1463207	GCA_001129165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/165/GCA_001129165.2_7622_3_66	-	CH2084
Escherichia coli HVH 216 (4-3042952)	1281143	PRJNA186244	186244	Proteobacteria	Gammaproteobacteria	5.23722	50.4	-	AVZP01	18	5386	5027	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885855	GCA_000459355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/355/GCA_000459355.1_Esch_coli_HVH_216_4-3042952_V1	-	HVH 216 (4-3042952)
Mycobacterium tuberculosis MAL020167	1354135	PRJNA211698	211698	Terrabacteria group	Actinobacteria	4.37154	65.5	-	JKYT01	41	4275	4103	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231165	GCA_000667285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/285/GCA_000667285.1_Myco_tube_MAL020167_V1	-	MAL020167
Listeria monocytogenes	1639	PRJEB8942	324209	Terrabacteria group	Firmicutes	2.93893	37.9	-	FJMT01	43	2999	2853	6/2/16	3/1/17	Contig	JUSTUS LIEBIG UNIVERSITY	SAMEA3878259	GCA_900064425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/425/GCA_900064425.1_ILCC175_Lm_175_LargeContigs.fna	-	-
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.87037	30.2	-	MJXC01	73	1989	1803	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03360162	GCA_001762595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/595/GCA_001762595.1_ASM176259v1	-	BCW_6453
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000202	1173477	PRJNA159379	159379	Proteobacteria	Gammaproteobacteria	4.72783	52.1	-	JRDU01	64	4796	4583	9/5/14	2/26/17	Contig	FDA	SAMN01942309	GCA_000748225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/225/GCA_000748225.1_CFSAN000202_01.0	-	CFSAN000202
Staphylococcus aureus M0902	1388674	PRJNA216847	216847	Terrabacteria group	Firmicutes	2.86196	32.9	-	JCRL01	17	3001	2832	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325798	GCA_000545105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/105/GCA_000545105.1_Stap_aure_M0902_V1	-	M0902
Staphylococcus aureus M0903	1388675	PRJNA216848	216848	Terrabacteria group	Firmicutes	2.85728	32.9	-	JCRM01	20	2994	2826	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325799	GCA_000545125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/125/GCA_000545125.1_Stap_aure_M0903_V1	-	M0903
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000212	1173461	PRJNA159347	159347	Proteobacteria	Gammaproteobacteria	4.68366	52.2	-	JRDM01	72	4733	4527	9/5/14	2/27/17	Contig	FDA	SAMN00862341	GCA_000748245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/245/GCA_000748245.1_CFSAN000212_01.0	-	CFSAN000212
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.839	30.2	-	MJXD01	78	1958	1763	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03360163	GCA_001762615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/615/GCA_001762615.1_ASM176261v1	-	BCW_6454
Listeria monocytogenes	1639	PRJEB8942	324209	Terrabacteria group	Firmicutes	2.93793	37.9	-	FJMR01	49	3003	2823	6/2/16	3/1/17	Contig	JUSTUS LIEBIG UNIVERSITY	SAMEA3878257	GCA_900064775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/775/GCA_900064775.1_ILCC031_Lm_31_LargeContigs	-	-
Mycobacterium tuberculosis MAL020172	1354136	PRJNA211699	211699	Terrabacteria group	Actinobacteria	4.41196	65.6	-	JKYS01	4	4273	4105	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231166	GCA_000667305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/305/GCA_000667305.1_Myco_tube_MAL020172_V1	-	MAL020172
Escherichia coli HVH 217 (4-1022806)	1281144	PRJNA186245	186245	Proteobacteria	Gammaproteobacteria	5.26554	50.7	-	AVZQ01	17	5508	5179	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885856	GCA_000459375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/375/GCA_000459375.1_Esch_coli_HVH_217_4-1022806_V1	-	HVH 217 (4-1022806)
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.24629	39.6	-	CLFN01	70	2465	2244	3/21/15	3/11/17	Contig	SC	SAMEA1025751	GCA_001129205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/205/GCA_001129205.1_6899_7_22	-	SMRU2110
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.79961	66.1	-	LLQV01	88	6486	6251	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128634	GCA_001453345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/345/GCA_001453345.1_WH-SGI-V-07624	26604259	WH-SGI-V-07624
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.82691	38.9	-	JWTN03	154	3703	3557	12/29/14	3/18/17	Contig	JCVI	SAMN03084876	GCA_000811085.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/085/GCA_000811085.3_ASM81108v3	-	UH392_684
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.63591	50.8	-	FUCR01	350	5171	4466	1/28/17	2/26/17	Scaffold	SC	SAMEA1570018	GCA_900160255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/255/GCA_900160255.1_8403_8_56	-	sh1440
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.06185	28.4	-	FUTN01	38	3775	3633	2/14/17	2/23/17	Scaffold	SC	SAMEA2239374	GCA_900166205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/205/GCA_900166205.1_11670_1_24	-	CD23
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.57936	57.1	-	LNHX01	90	5646	5389	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158306	GCA_001463215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/215/GCA_001463215.1_ASM146321v1	-	50675619
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.2061	64	-	FVOV01	29	5254	5133	3/10/17	3/18/17	Scaffold	SC	SAMEA2275868	GCA_900137215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/215/GCA_900137215.1_12082_5_86	-	1142
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.91409	64.3	-	FVOR01	19	4873	4733	3/10/17	3/18/17	Scaffold	SC	SAMEA2275796	GCA_900137225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/225/GCA_900137225.1_12082_5_69	-	1070
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.49312	57.2	-	LNIC01	135	5587	5368	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158311	GCA_001463285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/285/GCA_001463285.1_ASM146328v1	-	50732159
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.41752	28.4	-	FUTO01	47	4206	4028	2/14/17	2/23/17	Scaffold	SC	SAMEA2239403	GCA_900166215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/215/GCA_900166215.1_11670_1_55	-	CD52
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.65029	50.8	-	FUCS01	351	5197	4477	1/28/17	2/26/17	Scaffold	SC	SAMEA1569869	GCA_900160265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/265/GCA_900160265.1_8403_8_57	-	sh1441
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.17671	39	-	JWXR03	182	4107	3954	12/29/14	3/18/17	Contig	JCVI	SAMN03084755	GCA_000811105.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/105/GCA_000811105.3_ASM81110v3	-	UH280_93
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.66677	66.2	-	LLRA01	46	6478	6301	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128639	GCA_001453385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/385/GCA_001453385.1_WH-SGI-V-07629	26604259	WH-SGI-V-07629
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.01287	39.7	-	CLDD01	64	2182	1970	3/21/15	3/11/17	Contig	SC	SAMEA1025911	GCA_001129365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/365/GCA_001129365.1_6899_4_23	-	SMRU2039
Escherichia coli HVH 218 (4-4500903)	1281145	PRJNA186246	186246	Proteobacteria	Gammaproteobacteria	5.27492	50.3	-	AVZR01	20	5411	5008	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885857	GCA_000459395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/395/GCA_000459395.1_Esch_coli_HVH_218_4-4500903_V1	-	HVH 218 (4-4500903)
Mycobacterium tuberculosis MAL020174	1354142	PRJNA211701	211701	Terrabacteria group	Actinobacteria	4.42624	65.6	-	JKYQ01	6	4283	4117	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231168	GCA_000667345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/345/GCA_000667345.1_Myco_tube_MAL020174_V1	-	MAL020174
Listeria monocytogenes	1639	PRJEB8942	324209	Terrabacteria group	Firmicutes	2.99275	37.8	-	FJUV01	39	3046	2974	6/2/16	3/1/17	Contig	JUSTUS LIEBIG UNIVERSITY	SAMEA3879004	GCA_900074875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/875/GCA_900074875.1_ILCC619_contigs	-	-
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.73892	30.3	-	MJXE01	47	1851	1694	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03360165	GCA_001762635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/635/GCA_001762635.1_ASM176263v1	-	BCW_6456
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000213	1173438	PRJNA159301	159301	Proteobacteria	Gammaproteobacteria	4.60274	52.2	-	JRDL01	78	4636	4423	9/5/14	2/26/17	Contig	FDA	SAMN01942285	GCA_000748265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/265/GCA_000748265.1_CFSAN000213_01.0	-	CFSAN000213
Staphylococcus aureus M0905	1388677	PRJNA216850	216850	Terrabacteria group	Firmicutes	2.82752	32.9	-	JCRN01	10	2937	2772	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325801	GCA_000545145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/145/GCA_000545145.1_Stap_aure_M0905_V1	-	M0905
Staphylococcus aureus M0907	1388679	PRJNA216852	216852	Terrabacteria group	Firmicutes	2.85419	32.8	-	JCRO01	66	3004	2826	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325803	GCA_000545165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/165/GCA_000545165.1_Stap_aure_M0907_V1	-	M0907
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000214	1173439	PRJNA159303	159303	Proteobacteria	Gammaproteobacteria	4.57316	52.3	-	JRDK01	125	4629	4396	9/5/14	2/26/17	Contig	FDA	SAMN01942279	GCA_000748285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/285/GCA_000748285.1_CFSAN000214_01.0	-	CFSAN000214
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.77075	30.3	-	MJXG01	48	1841	1673	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03360167	GCA_001762675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/675/GCA_001762675.1_ASM176267v1	-	BCW_6458
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.0063	37.8	-	FUIU01	18	3048	2962	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72809668	GCA_900162115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/115/GCA_900162115.1_15G10	-	n/a
Mycobacterium tuberculosis MAL020179	1354119	PRJNA211704	211704	Terrabacteria group	Actinobacteria	4.42342	65.6	-	JKYO01	6	4301	4115	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231171	GCA_000667385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/385/GCA_000667385.1_Myco_tube_MAL020179_V1	-	MAL020179
Escherichia coli HVH 220 (4-5876842)	1281146	PRJNA186247	186247	Proteobacteria	Gammaproteobacteria	5.26325	50.3	-	AVZS01	23	5405	5002	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885858	GCA_000459415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/415/GCA_000459415.1_Esch_coli_HVH_220_4-5876842_V1	-	HVH 220 (4-5876842)
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08425	39.6	-	CLMQ01	39	2272	2046	3/21/15	3/11/17	Contig	SC	SAMEA1028780	GCA_001129425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/425/GCA_001129425.1_6938_7_4	-	SMRU2692
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.49655	66.3	-	LLRJ01	78	6193	5997	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128648	GCA_001453435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/435/GCA_001453435.1_WH-SGI-V-07638	26604259	WH-SGI-V-07638
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.15198	39	-	JWWD03	121	4059	3928	12/29/14	3/18/17	Contig	JCVI	SAMN03084799	GCA_000811145.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/145/GCA_000811145.3_ASM81114v3	-	UH71_296
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.66757	50.7	-	FUCU01	356	5209	4497	1/28/17	2/26/17	Scaffold	SC	SAMEA1569859	GCA_900160275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/275/GCA_900160275.1_8403_8_58	-	sh1442
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.25411	28.2	-	FUTP01	31	3996	3860	2/14/17	2/23/17	Scaffold	SC	SAMEA2239401	GCA_900166225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/225/GCA_900166225.1_11670_1_53	-	CD50
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.48574	57.2	-	LNIB01	102	5480	5263	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158310	GCA_001463295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/295/GCA_001463295.1_ASM146329v1	-	50700924
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23061	64	-	FSKC01	29	5269	5137	12/14/16	3/22/17	Scaffold	SC	SAMEA2275789	GCA_900137235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/235/GCA_900137235.1_12082_5_68	-	1063
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.1603	64.1	-	FVOW01	13	5275	5082	3/10/17	3/18/17	Scaffold	SC	SAMEA2275853	GCA_900137245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/245/GCA_900137245.1_12082_5_81	-	1127
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.39984	57.3	-	LNIM01	208	5516	5302	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158321	GCA_001463415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/415/GCA_001463415.1_ASM146341v1	-	50834782
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.13258	28.5	-	FUTQ01	32	3836	3699	2/14/17	2/23/17	Scaffold	SC	SAMEA2239358	GCA_900166235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/235/GCA_900166235.1_11670_1_7	-	CD07
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.61582	50.8	-	FUCV01	376	5177	4412	1/28/17	2/26/17	Scaffold	SC	SAMEA1569796	GCA_900160285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/285/GCA_900160285.1_8403_8_60	-	sh1444
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.9059	38.9	-	JWWA03	121	3778	3657	12/29/14	3/18/17	Contig	JCVI	SAMN03084802	GCA_000811165.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/165/GCA_000811165.3_ASM81116v3	-	UH184_309
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.80247	66.1	-	LLRR01	107	6545	6326	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128656	GCA_001453485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/485/GCA_001453485.1_WH-SGI-V-07646	26604259	WH-SGI-V-07646
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09278	39.5	-	COAI02	130	2272	2056	3/23/15	3/11/17	Contig	SC	SAMEA1463291	GCA_001129465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/465/GCA_001129465.2_7553_6_7	-	PT8120
Escherichia coli HVH 221 (4-3136817)	1281147	PRJNA186248	186248	Proteobacteria	Gammaproteobacteria	4.78678	50.7	-	AVZT01	6	4967	4585	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885859	GCA_000459435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/435/GCA_000459435.1_Esch_coli_HVH_221_4-3136817_V1	-	HVH 221 (4-3136817)
Mycobacterium tuberculosis MAL020181	1354120	PRJNA211705	211705	Terrabacteria group	Actinobacteria	4.42915	65.5	-	JKYN01	4	4282	4110	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231172	GCA_000667405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/405/GCA_000667405.1_Myco_tube_MAL020181_V1	-	MAL020181
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.16918	37.8	-	FUIZ01	32	3283	3178	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72822418	GCA_900162125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/125/GCA_900162125.1_19C01	-	n/a
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.87373	30.3	-	MJXH01	91	1998	1812	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03360168	GCA_001762695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/695/GCA_001762695.1_ASM176269v1	-	BCW_6459
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000215	1173440	PRJNA159305	159305	Proteobacteria	Gammaproteobacteria	4.77163	52.1	-	JRDJ01	81	4872	4630	9/5/14	2/26/17	Contig	FDA	SAMN00862338	GCA_000748305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/305/GCA_000748305.1_CFSAN000215_01.0	-	CFSAN000215
Staphylococcus aureus M0909	1388681	PRJNA216854	216854	Terrabacteria group	Firmicutes	2.82551	32.8	-	JCRP01	35	2965	2802	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325805	GCA_000545185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/185/GCA_000545185.1_Stap_aure_M0909_V1	-	M0909
Staphylococcus aureus M0910	1388682	PRJNA216855	216855	Terrabacteria group	Firmicutes	2.88826	32.8	-	JCRQ01	72	3069	2933	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325806	GCA_000545205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/205/GCA_000545205.1_Stap_aure_M0910_V1	-	M0910
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000216	1173469	PRJNA159363	159363	Proteobacteria	Gammaproteobacteria	4.78297	52.1	-	JRDI01	72	4890	4659	9/5/14	2/26/17	Contig	FDA	SAMN01942319	GCA_000748325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/325/GCA_000748325.1_CFSAN000216_01.0	-	CFSAN000216
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.68926	30.5	-	MJXR01	29	1760	1632	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03357964	GCA_001762895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/895/GCA_001762895.1_ASM176289v1	-	BCW_4219
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.00629	37.8	-	FUJP01	18	3049	2962	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72829918	GCA_900162135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/135/GCA_900162135.1_27A05	-	n/a
Mycobacterium tuberculosis MAL020182	1354121	PRJNA211706	211706	Terrabacteria group	Actinobacteria	4.41251	65.5	-	JKYM01	3	4273	4110	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231173	GCA_000667425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/425/GCA_000667425.1_Myco_tube_MAL020182_V1	-	MAL020182
Escherichia coli HVH 222 (4-2977443)	1281148	PRJNA186249	186249	Proteobacteria	Gammaproteobacteria	5.15117	50.7	-	AVZU01	18	5339	4967	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885860	GCA_000459455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/455/GCA_000459455.1_Esch_coli_HVH_222_4-2977443_V1	-	HVH 222 (4-2977443)
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10142	39.7	-	CKHL01	61	2326	2104	3/21/15	3/11/17	Contig	SC	SAMEA1023922	GCA_001129525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/525/GCA_001129525.1_6631_2_21	-	35F
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.85294	66.1	-	LLRT01	184	6626	6388	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128658	GCA_001453495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/495/GCA_001453495.1_WH-SGI-V-07648	26604259	WH-SGI-V-07648
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.17504	39	-	JWXO03	190	4105	3959	12/29/14	3/18/17	Contig	JCVI	SAMN03084758	GCA_000811185.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/185/GCA_000811185.3_ASM81118v3	-	UH280_99
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.65543	50.7	-	FUCW01	378	5202	4465	1/28/17	2/26/17	Scaffold	SC	SAMEA1569904	GCA_900160295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/295/GCA_900160295.1_8403_8_59	-	sh1443
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.17802	28.6	-	FUTR01	35	3947	3783	2/14/17	2/23/17	Scaffold	SC	SAMEA2239373	GCA_900166245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/245/GCA_900166245.1_11670_1_23	-	CD22
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.29258	57.5	-	LNIQ01	64	5288	5069	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158325	GCA_001463445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/445/GCA_001463445.1_ASM146344v1	-	50877064
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.08878	64.1	-	FSKE01	31	5065	4919	12/14/16	3/21/17	Scaffold	SC	SAMEA2275746	GCA_900137255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/255/GCA_900137255.1_12163_1_91	-	1020
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.34758	64	-	FSKD01	46	5436	5219	12/14/16	3/22/17	Scaffold	SC	SAMEA2275858	GCA_900137265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/265/GCA_900137265.1_12082_5_82	-	1132
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.68761	57	-	LNIS01	139	5717	5463	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158327	GCA_001463475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/475/GCA_001463475.1_ASM146347v1	-	50884375
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.20281	28.6	-	FUTS01	51	3938	3792	2/14/17	2/23/17	Scaffold	SC	SAMEA2239361	GCA_900166255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/255/GCA_900166255.1_11670_1_11	-	CD10
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.47552	50.8	-	FUCT01	341	4943	4274	1/28/17	2/26/17	Scaffold	SC	SAMEA1569788	GCA_900160305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/305/GCA_900160305.1_8403_8_61	-	sh1445
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.77915	39	-	JWXP03	153	3621	3479	12/29/14	3/18/17	Contig	JCVI	SAMN03084757	GCA_000811205.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/205/GCA_000811205.3_ASM81120v3	-	UH410_96
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.90275	65.9	-	LLRV01	206	6528	6288	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128660	GCA_001453515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/515/GCA_001453515.1_WH-SGI-V-07650	26604259	WH-SGI-V-07650
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.05887	39.5	-	CMIT01	51	2254	2009	3/23/15	3/11/17	Contig	SC	SAMEA1029444	GCA_001129545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/545/GCA_001129545.1_7038_7_20	-	SMRU3020
Escherichia coli HVH 223 (4-2976528)	1281149	PRJNA186250	186250	Proteobacteria	Gammaproteobacteria	5.36993	50.7	-	AVZV01	25	5585	5248	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885861	GCA_000459475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/475/GCA_000459475.1_Esch_coli_HVH_223_4-2976528_V1	-	HVH 223 (4-2976528)
Mycobacterium tuberculosis MAL020186	1354101	PRJNA211708	211708	Terrabacteria group	Actinobacteria	4.42894	65.5	-	JKYK01	6	4292	4117	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231175	GCA_000667465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/465/GCA_000667465.1_Myco_tube_MAL020186_V1	-	MAL020186
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.13878	37.8	-	FUJZ01	26	3235	3135	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72838918	GCA_900162145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/145/GCA_900162145.1_12F11	-	n/a
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.8121	30.1	-	MJXS01	71	1904	1713	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03357965	GCA_001762915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/915/GCA_001762915.1_ASM176291v1	-	BCW_4220
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000217	1173441	PRJNA159307	159307	Proteobacteria	Gammaproteobacteria	4.66507	52.3	-	JRDH01	72	4732	4512	9/5/14	2/26/17	Contig	FDA	SAMN01942267	GCA_000748345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/345/GCA_000748345.1_CFSAN000217_01.0	-	CFSAN000217
Staphylococcus aureus M0911	1388683	PRJNA216856	216856	Terrabacteria group	Firmicutes	2.90258	32.8	-	JCRR01	44	3075	2889	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325807	GCA_000545225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/225/GCA_000545225.1_Stap_aure_M0911_V1	-	M0911
Staphylococcus aureus M0913	1388684	PRJNA216857	216857	Terrabacteria group	Firmicutes	2.84164	32.8	-	JCRS01	63	2996	2808	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325808	GCA_000545245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/245/GCA_000545245.1_Stap_aure_M0913_V1	-	M0913
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000218	1173455	PRJNA159335	159335	Proteobacteria	Gammaproteobacteria	4.6178	52.3	-	JRDG01	72	4666	4459	9/5/14	2/26/17	Contig	FDA	SAMN01942287	GCA_000748365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/365/GCA_000748365.1_CFSAN000218_01.0	-	CFSAN000218
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.81201	30.1	-	MJXT01	76	1898	1714	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03357967	GCA_001762935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/935/GCA_001762935.1_ASM176293v1	-	BCW_4222
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.1715	37.8	-	FUIN01	26	3285	3181	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72807418	GCA_900162155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/155/GCA_900162155.1_15D07	-	n/a
Mycobacterium tuberculosis MAL020187	1354102	PRJNA211709	211709	Terrabacteria group	Actinobacteria	4.42267	65.5	-	JKYJ01	7	4298	4117	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231176	GCA_000667485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/485/GCA_000667485.1_Myco_tube_MAL020187_V1	-	MAL020187
Escherichia coli HVH 225 (4-1273116)	1281150	PRJNA186251	186251	Proteobacteria	Gammaproteobacteria	5.42317	50.4	-	AVZW01	26	5589	5171	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885862	GCA_000459495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/495/GCA_000459495.1_Esch_coli_HVH_225_4-1273116_V1	-	HVH 225 (4-1273116)
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.03582	39.6	-	CKHF01	56	2208	2021	3/21/15	3/11/17	Contig	SC	SAMEA1023990	GCA_001129565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/565/GCA_001129565.1_6631_2_1	-	16F
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.77238	66.1	-	LLRY01	98	6460	6261	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128663	GCA_001453545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/545/GCA_001453545.1_WH-SGI-V-07678	26604259	WH-SGI-V-07678
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.04035	38.9	-	JWXN03	169	3960	3831	12/29/14	3/18/17	Contig	JCVI	SAMN03084759	GCA_000811225.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/225/GCA_000811225.3_ASM81122v3	-	UH315_100
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.73096	50.8	-	FUCX01	355	5318	4583	1/28/17	2/26/17	Scaffold	SC	SAMEA1569776	GCA_900160315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/315/GCA_900160315.1_8403_8_62	-	sh1446
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.15446	28.2	-	FUTT01	38	3820	3688	2/14/17	2/23/17	Scaffold	SC	SAMEA2239415	GCA_900166265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/265/GCA_900166265.1_11670_1_67	-	CD64
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	6.00203	56.6	-	LNIT01	132	6203	5847	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158328	GCA_001463525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/525/GCA_001463525.1_ASM146352v1	-	50893576
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.17674	64.1	-	FSKF01	17	5225	5102	12/14/16	3/21/17	Scaffold	SC	SAMEA2275750	GCA_900137275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/275/GCA_900137275.1_12163_1_94	-	1024
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.30289	64.1	-	FVOU01	21	5406	5274	3/10/17	3/18/17	Scaffold	SC	SAMEA2275749	GCA_900137285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/285/GCA_900137285.1_12163_1_93	-	1023
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.87182	56.6	-	LNIA01	165	5991	5686	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158309	GCA_001463555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/555/GCA_001463555.1_ASM146355v1	-	50690310
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.25693	28.2	-	FUTU01	36	4002	3856	2/14/17	2/23/17	Scaffold	SC	SAMEA2239406	GCA_900166275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/275/GCA_900166275.1_11670_1_58	-	CD55
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.71	50.8	-	FUDB01	365	5273	4561	1/28/17	2/22/17	Scaffold	SC	SAMEA1569930	GCA_900160345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/345/GCA_900160345.1_8403_8_65	-	sh1449
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.0703	39	-	JWXM03	173	3985	3849	12/29/14	3/18/17	Contig	JCVI	SAMN03084760	GCA_000811245.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/245/GCA_000811245.3_ASM81124v3	-	UH315_101
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.61727	66	-	LLRZ01	204	6378	6124	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128664	GCA_001453565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/565/GCA_001453565.1_WH-SGI-V-07679	26604259	WH-SGI-V-07679
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.17016	39.6	-	CMTI01	77	2341	2074	3/23/15	3/15/17	Contig	SC	SAMEA1022798	GCA_001129705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/705/GCA_001129705.1_5737_2_12	-	30638
Escherichia coli HVH 227 (4-2277670)	1281151	PRJNA186252	186252	Proteobacteria	Gammaproteobacteria	5.21917	50.4	-	AVZX01	19	5372	5005	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885863	GCA_000459515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/515/GCA_000459515.1_Esch_coli_HVH_227_4-2277670_V1	-	HVH 227 (4-2277670)
Mycobacterium tuberculosis MAL020192	1354103	PRJNA211710	211710	Terrabacteria group	Actinobacteria	4.38482	65.5	-	JKYI01	4	4296	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231177	GCA_000667505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/505/GCA_000667505.1_Myco_tube_MAL020192_V1	-	MAL020192
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.11116	37.8	-	FUIV01	24	3199	3099	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72813418	GCA_900162165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/165/GCA_900162165.1_16H02	-	n/a
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.79295	30.3	-	MJXU01	73	1858	1674	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03357968	GCA_001762945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/945/GCA_001762945.1_ASM176294v1	-	BCW_4223
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000953	1182182	PRJNA162821	162821	Proteobacteria	Gammaproteobacteria	4.7491	52.2	-	JRCH01	185	4809	4570	9/5/14	2/26/17	Contig	FDA	SAMN01942284	GCA_000748385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/385/GCA_000748385.1_CFSAN000953_01.0	-	CFSAN000953
Staphylococcus aureus M0914	1388685	PRJNA216858	216858	Terrabacteria group	Firmicutes	2.93385	32.8	-	JCRT01	40	3100	2923	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325809	GCA_000545265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/265/GCA_000545265.1_Stap_aure_M0914_V1	-	M0914
Staphylococcus aureus M0916	1388687	PRJNA216860	216860	Terrabacteria group	Firmicutes	2.80033	32.8	-	JCRU01	40	2902	2718	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325811	GCA_000545285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/285/GCA_000545285.1_Stap_aure_M0916_V1	-	M0916
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000954	1182183	PRJNA162823	162823	Proteobacteria	Gammaproteobacteria	4.76483	52.2	-	JRCG01	98	4836	4602	9/5/14	2/27/17	Contig	FDA	SAMN01942244	GCA_000748405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/405/GCA_000748405.1_CFSAN000954_01.0	-	CFSAN000954
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.80866	30.1	-	MJXV01	72	1897	1711	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03357970	GCA_001762975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/975/GCA_001762975.1_ASM176297v1	-	BCW_4225
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.04107	37.9	-	FUIT01	19	3086	2989	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72812668	GCA_900162175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/175/GCA_900162175.1_16C03	-	n/a
Mycobacterium tuberculosis MAL020194	1354105	PRJNA211712	211712	Terrabacteria group	Actinobacteria	4.42629	65.5	-	JKYG01	8	4287	4116	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231179	GCA_000667545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/545/GCA_000667545.1_Myco_tube_MAL020194_V1	-	MAL020194
Escherichia coli HVH 228 (4-7787030)	1281152	PRJNA186254	186254	Proteobacteria	Gammaproteobacteria	5.07018	50.5	-	AVZY01	11	5184	4893	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885864	GCA_000459535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/535/GCA_000459535.1_Esch_coli_HVH_228_4-7787030_V1	-	HVH 228 (4-7787030)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07095	39.5	-	CNQB02	159	2222	2026	3/22/15	3/11/17	Contig	SC	SAMEA1032455	GCA_001129745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/745/GCA_001129745.2_6952_7_1	-	R34-3160
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.98755	65.8	-	LLSC01	105	6699	6473	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128667	GCA_001453585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/585/GCA_001453585.1_WH-SGI-V-07682	26604259	WH-SGI-V-07682
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.98224	39	-	JWWB03	179	3904	3735	12/29/14	3/18/17	Contig	JCVI	SAMN03084801	GCA_000811265.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/265/GCA_000811265.3_ASM81126v3	-	UH370_301
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.64598	50.8	-	FUCZ01	358	5190	4449	1/28/17	2/26/17	Scaffold	SC	SAMEA1569943	GCA_900160355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/355/GCA_900160355.1_8403_8_66	-	sh1450
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.19648	28.5	-	FUTW01	32	3912	3783	2/14/17	2/23/17	Scaffold	SC	SAMEA2239409	GCA_900166285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/285/GCA_900166285.1_11670_1_61	-	CD58
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.48626	57.3	-	LNIF01	94	5551	5312	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158314	GCA_001463605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/605/GCA_001463605.1_ASM146360v1	-	50806829
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.90074	64.2	-	FVOT01	11	4924	4792	3/10/17	3/18/17	Scaffold	SC	SAMEA2275747	GCA_900137295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/295/GCA_900137295.1_12163_1_92	-	1021
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.17532	64.1	-	FVPC01	16	5221	5099	3/10/17	3/18/17	Scaffold	SC	SAMEA2275752	GCA_900137305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/305/GCA_900137305.1_12163_1_96	-	1026
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.72568	56.7	-	LNIG01	177	5779	5509	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158315	GCA_001463615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/615/GCA_001463615.1_ASM146361v1	-	50752501
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	3.90908	28.4	-	FUTV01	54	3607	3453	2/14/17	2/23/17	Scaffold	SC	SAMEA2239394	GCA_900166295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/295/GCA_900166295.1_11670_1_46	-	CD43
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.54441	50.8	-	FUDC01	351	5054	4314	1/28/17	3/2/17	Scaffold	SC	SAMEA1569914	GCA_900160365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/365/GCA_900160365.1_8403_8_67	-	sh1451
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.86404	38.9	-	JWXL03	173	3756	3625	12/29/14	3/18/17	Contig	JCVI	SAMN03084761	GCA_000811285.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/285/GCA_000811285.3_ASM81128v3	-	UH126_102
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.90821	66.1	-	LLSD01	166	6649	6410	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128668	GCA_001453595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/595/GCA_001453595.1_WH-SGI-V-07683	26604259	WH-SGI-V-07683
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.11114	39.5	-	COBE02	141	2287	2080	3/23/15	3/11/17	Contig	SC	SAMEA1463278	GCA_001129765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/765/GCA_001129765.2_7622_2_37	-	BR1109
Escherichia coli KOEGE 3 (4a)	1281153	PRJNA186255	186255	Proteobacteria	Gammaproteobacteria	4.64541	50.7	-	AVZZ01	13	4692	4303	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885865	GCA_000459555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/555/GCA_000459555.1_Esch_coli_KOEGE_3_4a_V1	-	KOEGE 3 (4a)
Mycobacterium tuberculosis MAL020195	1354106	PRJNA211713	211713	Terrabacteria group	Actinobacteria	4.4092	65.5	-	JKYF01	5	4271	4104	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231180	GCA_000667565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/565/GCA_000667565.1_Myco_tube_MAL020195_V1	-	MAL020195
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	2.88018	37.9	-	FUJH01	13	2940	2848	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72823918	GCA_900162185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/185/GCA_900162185.1_19I05	-	n/a
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.69352	30.4	-	MJXW01	29	1747	1630	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03357971	GCA_001762995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/762/995/GCA_001762995.1_ASM176299v1	-	BCW_4226
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000955	1182184	PRJNA162825	162825	Proteobacteria	Gammaproteobacteria	4.75799	52.2	-	JRCF01	290	4798	4563	9/5/14	2/27/17	Contig	FDA	SAMN01942280	GCA_000748425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/425/GCA_000748425.1_CFSAN000955_01.0	-	CFSAN000955
Staphylococcus aureus M0917	1388688	PRJNA216861	216861	Terrabacteria group	Firmicutes	2.93912	32.9	-	JCRV01	31	3084	2917	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325812	GCA_000545305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/305/GCA_000545305.1_Stap_aure_M0917_V1	-	M0917
Staphylococcus aureus M0918	1388689	PRJNA216862	216862	Terrabacteria group	Firmicutes	2.88762	32.8	-	JCRW01	52	3031	2875	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325813	GCA_000545325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/325/GCA_000545325.1_Stap_aure_M0918_V1	-	M0918
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000957	1182187	PRJNA162831	162831	Proteobacteria	Gammaproteobacteria	4.764	52.2	-	JRCE01	156	4847	4580	9/5/14	2/26/17	Contig	FDA	SAMN01942237	GCA_000748445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/445/GCA_000748445.1_CFSAN000957_01.0	-	CFSAN000957
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.77609	30.2	-	MJXX01	74	1846	1662	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03357973	GCA_001763015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/015/GCA_001763015.1_ASM176301v1	-	BCW_4228
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.17144	37.8	-	FUIM01	26	3286	3183	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72808168	GCA_900162195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/195/GCA_900162195.1_15F05	-	n/a
Mycobacterium tuberculosis MAL020196	1354107	PRJNA211714	211714	Terrabacteria group	Actinobacteria	4.44786	65.5	-	JKYE01	8	4294	4129	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231181	GCA_000667585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/585/GCA_000667585.1_Myco_tube_MAL020196_V1	-	MAL020196
Escherichia coli KOEGE 7 (16a)	1281154	PRJNA186256	186256	Proteobacteria	Gammaproteobacteria	5.07362	50.8	-	AWAA01	21	5288	4788	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885866	GCA_000459575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/575/GCA_000459575.1_Esch_coli_KOEGE_7_16a_V1	-	KOEGE 7 (16a)
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.08474	39.7	-	CMKU01	64	2294	2085	3/22/15	3/4/17	Contig	SC	SAMEA1029312	GCA_001129785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/785/GCA_001129785.1_7054_5_15	-	SMRU3063
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.77145	66.1	-	LLSE01	95	6515	6296	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128669	GCA_001453615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/615/GCA_001453615.1_WH-SGI-V-07684	26604259	WH-SGI-V-07684
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.83052	39	-	JWXK03	117	3692	3550	12/29/14	3/18/17	Contig	JCVI	SAMN03084762	GCA_000811305.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/305/GCA_000811305.3_ASM81130v3	-	UH410_103
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.62409	51	-	FUDF01	365	5217	4427	1/28/17	3/2/17	Scaffold	SC	SAMEA1569893	GCA_900160385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/385/GCA_900160385.1_8403_8_69	-	sh1453
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.08302	28.6	-	FUTX01	26	3733	3605	2/14/17	2/23/17	Scaffold	SC	SAMEA2239360	GCA_900166305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/305/GCA_900166305.1_11670_1_10	-	CD09
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.56039	57.2	-	LNIL01	208	5634	5353	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158320	GCA_001463665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/665/GCA_001463665.1_ASM146366v1	-	50825040
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.91334	64.3	-	FVOZ01	16	4877	4737	3/10/17	3/18/17	Scaffold	SC	SAMEA2275751	GCA_900137315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/315/GCA_900137315.1_12163_1_95	-	1025
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.92463	64.3	-	FVPA01	9	4882	4732	3/10/17	3/18/17	Scaffold	SC	SAMEA2275753	GCA_900137325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/325/GCA_900137325.1_12163_2_1	-	1027
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.82633	57	-	LNIR01	108	5820	5524	12/9/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158326	GCA_001463685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/685/GCA_001463685.1_ASM146368v1	-	50878013
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	3.926	28.4	-	FUTY01	54	3593	3449	2/14/17	2/23/17	Scaffold	SC	SAMEA2239371	GCA_900166315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/315/GCA_900166315.1_11670_1_21	-	CD20
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.55344	50.8	-	FUDE01	363	5062	4329	1/28/17	2/26/17	Scaffold	SC	SAMEA1569687	GCA_900160395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/395/GCA_900160395.1_8403_8_70	-	sh1454
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.89475	38.8	-	JWXJ03	111	3781	3652	12/29/14	3/18/17	Contig	JCVI	SAMN03084763	GCA_000811325.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/325/GCA_000811325.3_ASM81132v3	-	UH126_106
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.85476	66.2	-	LLSG01	51	6587	6391	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128671	GCA_001453645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/645/GCA_001453645.1_WH-SGI-V-07686	26604259	WH-SGI-V-07686
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.1372	39.6	-	CMUZ01	79	2268	2050	3/23/15	3/4/17	Contig	SC	SAMEA1022948	GCA_001129805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/805/GCA_001129805.1_5750_2_11	-	256
Escherichia coli KOEGE 10 (25a)	1281155	PRJNA186257	186257	Proteobacteria	Gammaproteobacteria	5.43311	50.4	-	AWAB01	17	5668	5228	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885867	GCA_000459595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/595/GCA_000459595.1_Esch_coli_KOEGE_10_25a_V1	-	KOEGE 10 (25a)
Mycobacterium tuberculosis MAL020197	1354108	PRJNA211715	211715	Terrabacteria group	Actinobacteria	4.40575	65.6	-	JKYD01	3	4285	4120	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231182	GCA_000667605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/605/GCA_000667605.1_Myco_tube_MAL020197_V1	-	MAL020197
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	2.86208	37.9	-	FUJQ01	18	2901	2802	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72826918	GCA_900162205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/205/GCA_900162205.1_25B09	-	n/a
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.777	30.2	-	MJXY01	76	1844	1658	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03357974	GCA_001763035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/035/GCA_001763035.1_ASM176303v1	-	BCW_4229
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000958	1182188	PRJNA162833	162833	Proteobacteria	Gammaproteobacteria	4.76545	52.2	-	JRCD01	73	4828	4601	9/5/14	2/26/17	Contig	FDA	SAMN01942300	GCA_000748465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/465/GCA_000748465.1_CFSAN000958_01.0	-	CFSAN000958
Staphylococcus aureus M0919	1388690	PRJNA216863	216863	Terrabacteria group	Firmicutes	2.87078	32.9	-	JCRX01	72	3048	2857	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325814	GCA_000545345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/345/GCA_000545345.1_Stap_aure_M0919_V1	-	M0919
Staphylococcus aureus M0920	1388691	PRJNA216864	216864	Terrabacteria group	Firmicutes	2.87918	32.8	-	JCRY01	56	3042	2876	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325815	GCA_000545365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/365/GCA_000545365.1_Stap_aure_M0920_V1	-	M0920
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000959	1182189	PRJNA162835	162835	Proteobacteria	Gammaproteobacteria	4.76464	52.2	-	JRCC01	156	4842	4589	9/5/14	2/26/17	Contig	FDA	SAMN01942283	GCA_000748485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/485/GCA_000748485.1_CFSAN000959_01.0	-	CFSAN000959
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.83381	30.3	-	MJXZ01	66	1925	1750	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03357976	GCA_001763045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/763/045/GCA_001763045.1_ASM176304v1	-	BCW_4231
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.16335	37.9	-	FUJA01	40	3305	3197	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72816418	GCA_900162215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/215/GCA_900162215.1_17A02	-	n/a
Mycobacterium tuberculosis MAL020199	1354109	PRJNA211716	211716	Terrabacteria group	Actinobacteria	4.41369	65.6	-	JKYC01	4	4286	4118	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231183	GCA_000667625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/625/GCA_000667625.1_Myco_tube_MAL020199_V1	-	MAL020199
Escherichia coli KOEGE 30 (63a)	1281156	PRJNA186258	186258	Proteobacteria	Gammaproteobacteria	5.2088	50.4	-	AWAC01	12	5317	4970	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885868	GCA_000459615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/615/GCA_000459615.1_Esch_coli_KOEGE_30_63a_V1	-	KOEGE 30 (63a)
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	1.97054	39.7	-	CMLN01	49	2158	1965	3/23/15	3/4/17	Contig	SC	SAMEA1029338	GCA_001129825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/825/GCA_001129825.1_7054_6_14	-	SMRU3086
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.99294	66	-	LLSL01	89	6784	6596	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128676	GCA_001453665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/665/GCA_001453665.1_WH-SGI-V-07691	26604259	WH-SGI-V-07691
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.84598	39	-	JWXI03	160	3708	3576	12/29/14	3/18/17	Contig	JCVI	SAMN03084764	GCA_000811345.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/345/GCA_000811345.3_ASM81134v3	-	UH410_108
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.72677	50.6	-	FUDG01	398	5294	4484	1/28/17	2/26/17	Scaffold	SC	SAMEA1569674	GCA_900160405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/405/GCA_900160405.1_8403_8_71	-	sh1455
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.42943	28.5	-	FUUA01	49	4180	4028	2/14/17	2/23/17	Scaffold	SC	SAMEA2239395	GCA_900166325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/325/GCA_900166325.1_11670_1_47	-	CD44
Klebsiella pneumoniae	573	PRJNA299795	299795	Proteobacteria	Gammaproteobacteria	5.36278	57.9	-	LMAP01	51	5379	5112	12/15/15	2/21/17	Contig	Atma Jaya Catholic University of Indonesia	SAMN04215234	GCA_001466765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/765/GCA_001466765.1_ASM146676v1	26950331	II EMP3
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.07493	64.2	-	FVOX01	83	5073	4868	3/10/17	3/18/17	Scaffold	SC	SAMEA2275764	GCA_900137335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/335/GCA_900137335.1_12163_2_12	-	1038
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.08163	64.1	-	FVOY01	26	5093	4968	3/10/17	3/18/17	Scaffold	SC	SAMEA2275762	GCA_900137345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/345/GCA_900137345.1_12163_2_10	-	1036
Klebsiella pneumoniae	573	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.97986	56.8	-	LORK01	8	6214	5726	12/21/15	2/21/17	Contig	US Food and Drug Administration 	SAMN03996262	GCA_001471835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/835/GCA_001471835.1_ASM147183v1	-	FDAARGOS_91
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.25198	28.4	-	FUTZ01	30	3956	3812	2/14/17	2/23/17	Scaffold	SC	SAMEA2239390	GCA_900166335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/335/GCA_900166335.1_11670_1_41	-	CD39
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.6257	50.8	-	FUDJ01	353	5169	4406	1/28/17	2/26/17	Scaffold	SC	SAMEA1569819	GCA_900160415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/415/GCA_900160415.1_8403_8_72	-	sh1456
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.85369	39	-	JWXH03	161	3717	3581	12/29/14	3/18/17	Contig	JCVI	SAMN03084765	GCA_000811365.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/365/GCA_000811365.3_ASM81136v3	-	UH410_128
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.32196	66.5	-	LLSP01	68	5991	5837	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128680	GCA_001453675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/675/GCA_001453675.1_WH-SGI-V-07695	26604259	WH-SGI-V-07695
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07701	39.6	-	CNPX02	151	2270	2057	3/22/15	3/5/17	Contig	SC	SAMEA1032690	GCA_001129845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/845/GCA_001129845.2_6952_4_3	-	427937
Escherichia coli KOEGE 32 (66a)	1281157	PRJNA186259	186259	Proteobacteria	Gammaproteobacteria	5.22263	50.8	-	AWAD01	9	5387	5032	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885869	GCA_000459635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/635/GCA_000459635.1_Esch_coli_KOEGE_32_66a_V1	-	KOEGE 32 (66a)
Mycobacterium tuberculosis MAL020200	1354110	PRJNA211717	211717	Terrabacteria group	Actinobacteria	4.39046	65.5	-	JKYB01	3	4290	4119	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231184	GCA_000667645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/645/GCA_000667645.1_Myco_tube_MAL020200_V1	-	MAL020200
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.17509	37.8	-	FUIY01	37	3290	3182	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72821668	GCA_900162225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/225/GCA_900162225.1_19B09	-	n/a
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.95089	30.3	-	MJZZ01	73	2064	1850	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN04532442	GCA_001764095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/095/GCA_001764095.1_ASM176409v1	-	BCW_7438
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000960	1182190	PRJNA162837	162837	Proteobacteria	Gammaproteobacteria	4.76543	52.2	-	JRCB01	60	4828	4606	9/5/14	2/26/17	Contig	FDA	SAMN01942254	GCA_000748505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/505/GCA_000748505.1_CFSAN000960_01.0	-	CFSAN000960
Staphylococcus aureus M0922	1388693	PRJNA216866	216866	Terrabacteria group	Firmicutes	2.85214	32.8	-	JCRZ01	41	3010	2840	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325817	GCA_000545385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/385/GCA_000545385.1_Stap_aure_M0922_V1	-	M0922
Staphylococcus aureus M0924	1388695	PRJNA216868	216868	Terrabacteria group	Firmicutes	2.88853	32.8	-	JCSA01	60	3054	2894	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325819	GCA_000545405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/405/GCA_000545405.1_Stap_aure_M0924_V1	-	M0924
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000961	1182191	PRJNA162839	162839	Proteobacteria	Gammaproteobacteria	4.76567	52.2	-	JRCA01	71	4827	4599	9/5/14	2/26/17	Contig	FDA	SAMN01942253	GCA_000748525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/525/GCA_000748525.1_CFSAN000961_01.0	-	CFSAN000961
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.65042	30.5	-	MKAF01	37	1733	1620	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN04532417	GCA_001764215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/215/GCA_001764215.1_ASM176421v1	-	BCW_6924
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.10087	37.9	-	FUJS01	28	3197	3112	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72831418	GCA_900162235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/235/GCA_900162235.1_27F01	-	n/a
Mycobacterium tuberculosis MAL020201	1354111	PRJNA211718	211718	Terrabacteria group	Actinobacteria	4.46524	65.5	-	JKYA01	8	4301	4126	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231185	GCA_000667665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/665/GCA_000667665.1_Myco_tube_MAL020201_V1	-	MAL020201
Escherichia coli KOEGE 33 (68a)	1281158	PRJNA186260	186260	Proteobacteria	Gammaproteobacteria	5.26269	50.8	-	AWAE01	20	5522	5098	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885870	GCA_000459655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/655/GCA_000459655.1_Esch_coli_KOEGE_33_68a_V1	-	KOEGE 33 (68a)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.11287	39.5	-	COCU02	138	2304	2063	3/23/15	3/5/17	Contig	SC	SAMEA1463073	GCA_001129905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/905/GCA_001129905.2_7622_3_86	-	GL3031
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.75484	66.1	-	LLSQ01	115	6547	6318	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128681	GCA_001453705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/705/GCA_001453705.1_WH-SGI-V-07696	26604259	WH-SGI-V-07696
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.0442	39	-	JWXG01	132	-	-	-	-	Contig	JCVI	SAMN03084766	GCA_000811385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/385/GCA_000811385.1_ASM81138v1	-	UH484_133
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.65151	50.8	-	FUDI01	364	5171	4444	1/28/17	2/26/17	Scaffold	SC	SAMEA1569838	GCA_900160435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/435/GCA_900160435.1_8403_8_74	-	sh1458
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.41462	28.5	-	FUUB01	36	4164	4022	2/14/17	2/23/17	Scaffold	SC	SAMEA2239387	GCA_900166345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/345/GCA_900166345.1_11670_1_38	-	CD36
Klebsiella pneumoniae	573	PRJNA296441	296441	Proteobacteria	Gammaproteobacteria	5.89108	57.1	-	LOEF01	228	6026	5721	12/29/15	2/21/17	Contig	UTSA	SAMN04075791	GCA_001482995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/995/GCA_001482995.1_ASM148299v1	26966211	OC217
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.47555	64	-	FSKH01	56	5622	5396	12/14/16	3/21/17	Scaffold	SC	SAMEA2275766	GCA_900137355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/355/GCA_900137355.1_12163_2_14	-	1040
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.13611	64.1	-	FVPB01	31	5121	4972	3/10/17	3/18/17	Scaffold	SC	SAMEA2275763	GCA_900137365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/365/GCA_900137365.1_12163_2_11	-	1037
Klebsiella pneumoniae	573	PRJNA296441	296441	Proteobacteria	Gammaproteobacteria	5.90329	57	-	LOEG01	148	6048	5752	12/29/15	2/25/17	Contig	UTSA	SAMN04075796	GCA_001483005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/483/005/GCA_001483005.1_ASM148300v1	26966211	Z3209
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.41684	28.5	-	FUUC01	46	4174	4026	2/14/17	2/23/17	Scaffold	SC	SAMEA2239365	GCA_900166355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/355/GCA_900166355.1_11670_1_15	-	CD14
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.73211	50.7	-	FUDK01	370	5286	4543	1/28/17	2/26/17	Scaffold	SC	SAMEA1569830	GCA_900160445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/445/GCA_900160445.1_8403_8_75	-	sh1459
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.94242	39.1	-	JWXF03	277	3869	3709	12/29/14	3/18/17	Contig	JCVI	SAMN03084767	GCA_000811405.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/405/GCA_000811405.3_ASM81140v3	-	UH126_137
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.26304	65.6	-	LLSS01	225	7126	6795	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128683	GCA_001453725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/725/GCA_001453725.1_WH-SGI-V-07698	26604259	WH-SGI-V-07698
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08158	39.7	-	CRJN01	54	2313	2090	3/22/15	3/4/17	Contig	SC	SAMEA1025160	GCA_001129965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/965/GCA_001129965.1_6753_2_3	-	SMRU1491
Escherichia coli KOEGE 40 (102a)	1281159	PRJNA186261	186261	Proteobacteria	Gammaproteobacteria	4.81618	50.7	-	AWAF01	6	4986	4594	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885871	GCA_000459675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/675/GCA_000459675.1_Esch_coli_KOEGE_40_102a_V1	-	KOEGE 40 (102a)
Mycobacterium tuberculosis MAL020202	1354112	PRJNA211719	211719	Terrabacteria group	Actinobacteria	4.41006	65.6	-	JKXZ01	5	4274	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231186	GCA_000667685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/685/GCA_000667685.1_Myco_tube_MAL020202_V1	-	MAL020202
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.10072	37.9	-	FUIL01	28	3196	3112	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72805168	GCA_900162245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/245/GCA_900162245.1_15A07	-	n/a
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.72462	30.6	-	MKAI01	30	1803	1675	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03358123	GCA_001764275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/275/GCA_001764275.1_ASM176427v1	-	BCW_4456
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000227	1173447	PRJNA159319	159319	Proteobacteria	Gammaproteobacteria	4.95856	52.1	-	JRCZ01	368	5130	4818	9/5/14	2/26/17	Contig	FDA	SAMN01816227	GCA_000748545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/545/GCA_000748545.1_CFSAN000227_01.0	-	CFSAN000227
Staphylococcus aureus M0928	1388696	PRJNA216869	216869	Terrabacteria group	Firmicutes	2.87625	32.9	-	JCSB01	57	3033	2846	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325820	GCA_000545425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/425/GCA_000545425.1_Stap_aure_M0928_V1	-	M0928
Staphylococcus aureus M0929	1388697	PRJNA216870	216870	Terrabacteria group	Firmicutes	2.86963	32.8	-	JCSC01	47	3004	2848	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325821	GCA_000545445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/445/GCA_000545445.1_Stap_aure_M0929_V1	-	M0929
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000228	1173456	PRJNA159337	159337	Proteobacteria	Gammaproteobacteria	4.73313	52.2	-	JRCY01	56	4813	4594	9/5/14	2/26/17	Contig	FDA	SAMN00862340	GCA_000748565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/565/GCA_000748565.1_CFSAN000228_01.0	-	CFSAN000228
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.60173	30.6	-	MKAJ01	25	1637	1521	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03358127	GCA_001764295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/295/GCA_001764295.1_ASM176429v1	-	BCW_4460
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.00594	37.8	-	FUJK01	24	3088	2994	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72824668	GCA_900162255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/255/GCA_900162255.1_22A07	-	n/a
Mycobacterium tuberculosis MAL020206	1354114	PRJNA211721	211721	Terrabacteria group	Actinobacteria	4.41593	65.5	-	JKXX01	7	4275	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231188	GCA_000667705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/705/GCA_000667705.1_Myco_tube_MAL020206_V1	-	MAL020206
Escherichia coli KOEGE 43 (105a)	1281160	PRJNA186262	186262	Proteobacteria	Gammaproteobacteria	5.13746	50.5	-	AWAG01	20	5225	4879	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885872	GCA_000459695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/695/GCA_000459695.1_Esch_coli_KOEGE_43_105a_V1	-	KOEGE 43 (105a)
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.09017	39.5	-	CMDI01	53	2294	2084	3/21/15	3/4/17	Contig	SC	SAMEA1029167	GCA_001130065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/065/GCA_001130065.1_7011_3_18	-	SMRU2754
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.88934	66	-	LLSV01	160	6633	6389	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128686	GCA_001453735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/735/GCA_001453735.1_WH-SGI-V-07701	26604259	WH-SGI-V-07701
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.0056	38.8	-	JWXE01	96	-	-	-	-	Contig	JCVI	SAMN03084768	GCA_000811425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/425/GCA_000811425.1_ASM81142v1	-	UH437_147
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.71192	50.7	-	FUDM01	376	5277	4544	1/28/17	3/2/17	Scaffold	SC	SAMEA954714	GCA_900160455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/455/GCA_900160455.1_8403_8_77	-	sh1461
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.14224	28.7	-	FUUD01	39	3833	3691	2/14/17	2/23/17	Scaffold	SC	SAMEA2239369	GCA_900166365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/365/GCA_900166365.1_11670_1_19	-	CD18
Klebsiella pneumoniae	573	PRJNA296441	296441	Proteobacteria	Gammaproteobacteria	5.65309	57.1	-	LOEI01	234	5766	5455	12/29/15	2/25/17	Contig	UTSA	SAMN04075794	GCA_001483045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/483/045/GCA_001483045.1_ASM148304v1	26966211	OC511
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.40792	64.1	-	FSKG01	54	5518	5294	12/14/16	3/21/17	Scaffold	SC	SAMEA2275765	GCA_900137375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/375/GCA_900137375.1_12163_2_13	-	1039
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.0834	64.1	-	FVPD01	24	5092	4970	3/10/17	3/18/17	Scaffold	SC	SAMEA2275767	GCA_900137385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/385/GCA_900137385.1_12163_2_15	-	1041
Klebsiella pneumoniae	573	PRJNA296441	296441	Proteobacteria	Gammaproteobacteria	5.47074	57.4	-	LOEJ01	133	5496	5237	12/29/15	2/21/17	Contig	UTSA	SAMN04075711	GCA_001483055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/483/055/GCA_001483055.1_ASM148305v1	26966211	K1
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.3267	28.6	-	FUUE01	68	4102	3914	2/14/17	2/23/17	Scaffold	SC	SAMEA2239398	GCA_900166375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/375/GCA_900166375.1_11670_1_50	-	CD47
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.74065	50.8	-	FUDL01	367	5219	4542	1/28/17	2/26/17	Scaffold	SC	SAMEA1569763	GCA_900160465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/465/GCA_900160465.1_8403_8_78	-	sh1462
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.05528	38.8	-	JWXD01	109	-	-	-	-	Contig	JCVI	SAMN03084769	GCA_000811445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/445/GCA_000811445.1_ASM81144v1	-	UH437_148
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.80276	66.1	-	LLSZ01	130	6595	6368	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128690	GCA_001453755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/755/GCA_001453755.1_WH-SGI-V-07705	26604259	WH-SGI-V-07705
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05479	39.6	-	COCY02	132	2230	2011	3/23/15	3/11/17	Contig	SC	SAMEA1463290	GCA_001130105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/105/GCA_001130105.2_7622_3_93	-	GL3050
Escherichia coli KOEGE 44 (106a)	1281161	PRJNA186263	186263	Proteobacteria	Gammaproteobacteria	5.04379	50.5	-	AWAH01	11	5123	4792	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885873	GCA_000459715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/715/GCA_000459715.1_Esch_coli_KOEGE_44_106a_V1	-	KOEGE 44 (106a)
Mycobacterium tuberculosis MAL020208	1354115	PRJNA211722	211722	Terrabacteria group	Actinobacteria	4.42313	65.6	-	JKXW01	11	4297	4125	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231189	GCA_000667725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/725/GCA_000667725.1_Myco_tube_MAL020208_V1	-	MAL020208
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.17031	37.8	-	FUIP01	24	3283	3180	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72806668	GCA_900162265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/265/GCA_900162265.1_15C02	-	n/a
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.60485	30.6	-	MKAK01	22	1634	1520	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN03358128	GCA_001764315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/315/GCA_001764315.1_ASM176431v1	-	BCW_4461
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000231	1173423	PRJNA159271	159271	Proteobacteria	Gammaproteobacteria	4.74956	52.2	-	JRCW01	517	4929	4542	9/5/14	2/27/17	Contig	FDA	SAMN01816225	GCA_000748605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/605/GCA_000748605.1_CFSAN000231.0	-	CFSAN000231
Staphylococcus aureus M0930	1388698	PRJNA216871	216871	Terrabacteria group	Firmicutes	2.90319	32.9	-	JCSD01	64	3081	2900	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325822	GCA_000545465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/465/GCA_000545465.1_Stap_aure_M0930_V1	-	M0930
Staphylococcus aureus M0931	1388699	PRJNA216872	216872	Terrabacteria group	Firmicutes	2.89257	32.8	-	JCSE01	57	3060	2887	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325823	GCA_000545485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/485/GCA_000545485.1_Stap_aure_M0931_V1	-	M0931
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001088	1196347	PRJNA167847	167847	Proteobacteria	Gammaproteobacteria	4.77048	52.2	-	JRBS01	112	4830	4600	9/5/14	2/27/17	Contig	US Food and Drug Administration	SAMN01057784	GCA_000748665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/665/GCA_000748665.1_CFSAN001088_01.0	-	CFSAN001088
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.67898	30.5	-	MKAZ01	13	1745	1617	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN04532247	GCA_001764595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/595/GCA_001764595.1_ASM176459v1	-	BCW_4727
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.00629	37.8	-	FUIK01	18	3048	2961	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72804418	GCA_900162275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/275/GCA_900162275.1_15A04	-	n/a
Mycobacterium tuberculosis MAL020209	1354116	PRJNA211723	211723	Terrabacteria group	Actinobacteria	4.42373	65.6	-	JKXV01	3	4287	4121	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231190	GCA_000667745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/745/GCA_000667745.1_Myco_tube_MAL020209_V1	-	MAL020209
Escherichia coli KOEGE 56 (169a)	1281162	PRJNA186264	186264	Proteobacteria	Gammaproteobacteria	5.26868	50.3	-	AWAI01	23	5428	5019	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885874	GCA_000459735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/735/GCA_000459735.1_Esch_coli_KOEGE_56_169a_V1	-	KOEGE 56 (169a)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.1108	39.5	-	CNOI02	150	2288	2079	3/23/15	3/5/17	Contig	SC	SAMEA1032412	GCA_001130165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/165/GCA_001130165.2_6925_2_83	-	R34-3064
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.6562	66.3	-	LLTE01	82	6353	6181	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128695	GCA_001453775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/775/GCA_001453775.1_WH-SGI-V-07710	26604259	WH-SGI-V-07710
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.02863	38.9	-	JWXC01	102	-	-	-	-	Contig	JCVI	SAMN03084770	GCA_000811465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/465/GCA_000811465.1_ASM81146v1	-	UH437_149
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.84325	50.5	-	FUDO01	401	5450	4611	1/28/17	2/26/17	Scaffold	SC	SAMEA1569683	GCA_900160495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/495/GCA_900160495.1_8403_8_82	-	sh1466
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.23682	28.5	-	FUUF01	34	3940	3818	2/14/17	2/23/17	Scaffold	SC	SAMEA2239382	GCA_900166385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/385/GCA_900166385.1_11670_1_33	-	CD31
Klebsiella pneumoniae	573	PRJNA296441	296441	Proteobacteria	Gammaproteobacteria	5.99085	57	-	LOEH01	205	6192	5863	12/29/15	2/25/17	Contig	UTSA	SAMN04075795	GCA_001483105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/483/105/GCA_001483105.1_ASM148310v1	26966211	OC648
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.12542	64.1	-	FSKI01	20	5166	4986	12/14/16	3/21/17	Scaffold	SC	SAMEA2275768	GCA_900137395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/395/GCA_900137395.1_12163_2_16	-	1042
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18267	64	-	FSKJ01	23	5205	5068	12/14/16	3/21/17	Scaffold	SC	SAMEA2275769	GCA_900137405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/405/GCA_900137405.1_12163_2_17	-	1043
Klebsiella pneumoniae	573	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.36336	57.2	-	LLWB01	264	5479	5079	12/31/15	2/21/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04038603	GCA_001483725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/483/725/GCA_001483725.1_ASM148372v1	-	K45-67
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.02554	28.3	-	FUUH01	39	3727	3605	2/14/17	2/23/17	Scaffold	SC	SAMEA2239386	GCA_900166395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/395/GCA_900166395.1_11670_1_37	-	CD35
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.7341	50.8	-	FUDS01	372	5304	4542	1/28/17	2/26/17	Scaffold	SC	SAMEA1569845	GCA_900160505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/505/GCA_900160505.1_8403_8_85	-	sh1469
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.98635	39.1	-	JWYJ03	288	3876	3750	12/29/14	3/18/17	Contig	JCVI	SAMN03084737	GCA_000811485.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/485/GCA_000811485.3_ASM81148v3	-	UH243_54
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.08248	66.5	-	LLTG01	89	5782	5631	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128697	GCA_001453805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/805/GCA_001453805.1_WH-SGI-V-07299	26604259	WH-SGI-V-07299
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.07878	39.7	-	CMHA01	59	2301	2079	3/23/15	3/11/17	Contig	SC	SAMEA1029356	GCA_001130225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/225/GCA_001130225.1_7038_5_13	-	SMRU2965
Escherichia coli KOEGE 58 (171a)	1281163	PRJNA186265	186265	Proteobacteria	Gammaproteobacteria	5.11415	50.4	-	AWAJ01	15	5145	4800	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885875	GCA_000459755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/755/GCA_000459755.1_Esch_coli_KOEGE_58_171a_V1	-	KOEGE 58 (171a)
Mycobacterium tuberculosis MAL020211	1354117	PRJNA211724	211724	Terrabacteria group	Actinobacteria	4.41281	65.6	-	JKXU01	5	4281	4113	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02231191	GCA_000667765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/765/GCA_000667765.1_Myco_tube_MAL020211_V1	-	MAL020211
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.17176	37.8	-	FUJD01	27	3286	3183	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72814918	GCA_900162285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/285/GCA_900162285.1_16J10	-	n/a
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.69813	30.6	-	MKBB01	32	1790	1653	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN04532249	GCA_001764655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/655/GCA_001764655.1_ASM176465v1	-	BCW_4731
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001089	1196348	PRJNA167848	167848	Proteobacteria	Gammaproteobacteria	4.84514	52.2	-	JRBR01	276	4855	4615	9/5/14	2/26/17	Contig	US Food and Drug Administration	SAMN01057785	GCA_000748685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/685/GCA_000748685.1_CFSAN001089.0	-	CFSAN001089
Staphylococcus aureus M0932	1388700	PRJNA216873	216873	Terrabacteria group	Firmicutes	2.88751	32.8	-	JCSF01	35	3035	2867	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325824	GCA_000545505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/505/GCA_000545505.1_Stap_aure_M0932_V1	-	M0932
Staphylococcus aureus M0935	1388701	PRJNA216874	216874	Terrabacteria group	Firmicutes	2.9059	32.8	-	JCSG01	63	3086	2907	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325825	GCA_000545525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/525/GCA_000545525.1_Stap_aure_M0935_V1	-	M0935
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001099	1208624	PRJNA170557	170557	Proteobacteria	Gammaproteobacteria	4.76518	52.2	-	JRBQ01	188	4855	4598	9/5/14	2/27/17	Contig	FDA	SAMN01816353	GCA_000748705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/705/GCA_000748705.1_CFSAN001099_01.0	-	CFSAN001099
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.68411	30.4	-	MKBC01	34	1769	1666	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN04532250	GCA_001764665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/665/GCA_001764665.1_ASM176466v1	-	BCW_4734
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.17251	37.8	-	FUIJ01	27	3287	3182	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72805918	GCA_900162295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/295/GCA_900162295.1_15B09	-	n/a
Mycobacterium tuberculosis str. Haarlem	395095	PRJNA218188	218188	Terrabacteria group	Actinobacteria	4.40867	65.5	-	JLDE01	5	4275	4108	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02349329	GCA_000667785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/785/GCA_000667785.1_Myco_tube_Haarlem_V4	-	Haarlem
Escherichia coli KOEGE 61 (174a)	1281164	PRJNA186266	186266	Proteobacteria	Gammaproteobacteria	5.15618	50.5	-	AWAK01	9	5315	4961	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885876	GCA_000459775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/775/GCA_000459775.1_Esch_coli_KOEGE_61_174a_V1	-	KOEGE 61 (174a)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00217	39.6	-	CODT02	143	2181	1945	3/22/15	3/15/17	Contig	SC	SAMEA1463246	GCA_001130245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/245/GCA_001130245.2_7622_4_31	-	LE4099
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.94543	66	-	LLTL01	125	6728	6465	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128702	GCA_001453825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/825/GCA_001453825.1_WH-SGI-V-07251	26604259	WH-SGI-V-07251
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.03938	39	-	JWYI03	151	3934	3807	12/29/14	3/18/17	Contig	JCVI	SAMN03084738	GCA_000811505.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/505/GCA_000811505.3_ASM81150v3	-	UH243_55
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.658	50.8	-	FUDP01	371	5179	4445	1/28/17	2/26/17	Scaffold	SC	SAMEA1569834	GCA_900160525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/525/GCA_900160525.1_8403_8_86	-	sh1470
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	3.8394	28.2	-	FUUG01	55	3529	3377	2/14/17	2/23/17	Scaffold	SC	SAMEA2239367	GCA_900166405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/405/GCA_900166405.1_11670_1_17	-	CD16
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.65566	57.1	-	FBRV01	111	5798	5555	1/4/16	2/21/17	Contig	UMCG Groningen	SAMEA3515300	GCA_001510995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/995/GCA_001510995.1_ERS822449	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18112	64	-	FSKK01	23	5202	5079	12/14/16	3/22/17	Scaffold	SC	SAMEA2275770	GCA_900137415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/415/GCA_900137415.1_12163_2_18	-	1044
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.20771	64	-	FSKN01	16	5256	5139	12/14/16	3/21/17	Scaffold	SC	SAMEA2275772	GCA_900137425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/425/GCA_900137425.1_12163_2_20	-	1046
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.87361	56.7	-	FBRA01	92	5937	5669	1/4/16	2/21/17	Contig	UMCG Groningen	SAMEA3515299	GCA_001511015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/015/GCA_001511015.1_ERS822448	-	-
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.37903	28.5	-	FUUN01	56	4161	4005	2/14/17	2/23/17	Scaffold	SC	SAMEA2239399	GCA_900166415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/415/GCA_900166415.1_11670_1_51	-	CD48
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.57728	50.8	-	FUDQ01	356	5076	4367	1/28/17	2/26/17	Scaffold	SC	SAMEA1569677	GCA_900160535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/535/GCA_900160535.1_8403_8_81	-	sh1465
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.02803	39	-	JWUQ03	172	3950	3762	12/29/14	3/18/17	Contig	JCVI	SAMN03084840	GCA_000811525.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/525/GCA_000811525.3_ASM81152v3	-	UH430_466
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.43371	66.1	-	LLTP01	114	6167	5997	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128706	GCA_001453835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/835/GCA_001453835.1_WH-SGI-V-07255	26604259	WH-SGI-V-07255
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.14639	39.7	-	CMTY01	107	2302	2017	3/22/15	3/11/17	Contig	SC	SAMEA1022865	GCA_001130265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/265/GCA_001130265.1_5737_3_7	-	104_58
Escherichia coli KOEGE 62 (175a)	1281165	PRJNA186267	186267	Proteobacteria	Gammaproteobacteria	5.5652	50.7	-	AWAL01	6	5834	5490	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885877	GCA_000459795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/795/GCA_000459795.1_Esch_coli_KOEGE_62_175a_V1	-	KOEGE 62 (175a)
Mycobacterium tuberculosis H37Rv	83332	PRJNA218189	218189	Terrabacteria group	Actinobacteria	4.41262	65.4	-	JLDD01	7	4302	4133	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02349330	GCA_000667805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/805/GCA_000667805.1_Myco_tube_H37Rv_V2	-	H37Rv
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.04356	37.9	-	FUIS01	14	3081	2987	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72811918	GCA_900162305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/305/GCA_900162305.1_16C01	-	n/a
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.83713	30.5	-	MKBD01	35	1949	1823	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN04532251	GCA_001764675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/675/GCA_001764675.1_ASM176467v1	-	BCW_4735
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001102	1208625	PRJNA170558	170558	Proteobacteria	Gammaproteobacteria	4.78101	52.2	-	JRBP01	89	4836	4604	9/5/14	2/26/17	Contig	FDA	SAMN01816354	GCA_000748725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/725/GCA_000748725.1_CFSAN001102.0	-	CFSAN001102
Staphylococcus aureus M0936	1388702	PRJNA216875	216875	Terrabacteria group	Firmicutes	2.83082	32.8	-	JCSH01	37	2982	2821	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325826	GCA_000545545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/545/GCA_000545545.1_Stap_aure_M0936_V1	-	M0936
Staphylococcus aureus M0937	1388703	PRJNA216876	216876	Terrabacteria group	Firmicutes	2.80276	32.8	-	JCSI01	43	2919	2717	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325827	GCA_000545565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/565/GCA_000545565.1_Stap_aure_M0937_V1	-	M0937
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001105	1208626	PRJNA170559	170559	Proteobacteria	Gammaproteobacteria	4.71085	52.4	-	JRBO01	731	4829	4510	9/5/14	2/26/17	Contig	FDA	SAMN01816355	GCA_000748745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/745/GCA_000748745.1_CFSAN001105_01.0	-	CFSAN001105
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.74826	30.5	-	MKBF01	40	1833	1714	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN04532253	GCA_001764735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/735/GCA_001764735.1_ASM176473v1	-	BCW_4738
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.00206	37.7	-	FUJL01	38	3077	2963	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72829168	GCA_900162315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/315/GCA_900162315.1_25H01	-	n/a
Mycobacterium tuberculosis F11	336982	PRJNA218190	218190	Terrabacteria group	Actinobacteria	4.42801	65.5	-	JLDC01	5	4288	4110	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02349331	GCA_000667825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/825/GCA_000667825.1_Myco_tube_F11_V2	-	F11
Escherichia coli KOEGE 68 (182a)	1281166	PRJNA186268	186268	Proteobacteria	Gammaproteobacteria	5.05781	50.7	-	AWAM01	8	5100	4813	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885878	GCA_000459815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/815/GCA_000459815.1_Esch_coli_KOEGE_68_182a_V1	-	KOEGE 68 (182a)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0085	39.7	-	COFU02	128	2221	2000	3/22/15	3/5/17	Contig	SC	SAMEA1462986	GCA_001130385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/385/GCA_001130385.2_7622_5_92	-	ND6097
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.43748	65.5	-	LLTS01	175	7342	7012	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128709	GCA_001453885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/885/GCA_001453885.1_WH-SGI-V-07259	26604259	WH-SGI-V-07259
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.99769	39	-	JWUP03	198	3923	3734	12/29/14	3/18/17	Contig	JCVI	SAMN03084841	GCA_000811545.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/545/GCA_000811545.3_ASM81154v3	-	UH381_467
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.95303	50.4	-	FUDU01	411	5490	4780	1/28/17	2/26/17	Scaffold	SC	SAMEA1569781	GCA_900160545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/545/GCA_900160545.1_8403_8_87	-	sh1471
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.38959	28.5	-	FUUI01	36	4137	3983	2/14/17	2/23/17	Scaffold	SC	SAMEA2239410	GCA_900166425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/425/GCA_900166425.1_11670_1_62	-	CD59
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.58458	57.1	-	FBRK01	114	5729	5500	1/4/16	2/21/17	Contig	UMCG Groningen	SAMEA3515306	GCA_001511255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/255/GCA_001511255.1_ERS822455	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.24274	64.1	-	FSKL01	22	5324	5164	12/14/16	3/21/17	Scaffold	SC	SAMEA2275771	GCA_900137435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/435/GCA_900137435.1_12163_2_19	-	1045
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96815	64.2	-	FSKO01	34	4963	4813	12/14/16	3/21/17	Scaffold	SC	SAMEA2275773	GCA_900137445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/445/GCA_900137445.1_12163_2_21	-	1047
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.58104	57.1	-	FBRH01	122	5736	5503	1/4/16	2/21/17	Contig	UMCG Groningen	SAMEA3515307	GCA_001511335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/335/GCA_001511335.1_ERS822456	-	-
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.07233	28.5	-	FUUL01	35	3760	3633	2/14/17	2/23/17	Scaffold	SC	SAMEA2239388	GCA_900166435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/435/GCA_900166435.1_11670_1_39	-	CD37
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.6669	50.7	-	FUDV01	367	5192	4437	1/28/17	2/26/17	Scaffold	SC	SAMEA1569766	GCA_900160555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/555/GCA_900160555.1_8403_8_88	-	sh1472
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.02486	39.1	-	JWUO03	216	3916	3777	12/29/14	3/18/17	Contig	JCVI	SAMN03084842	GCA_000811565.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/565/GCA_000811565.3_ASM81156v3	-	UH225_472
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.08985	66	-	LLUB01	63	6866	6677	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128718	GCA_001453905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/905/GCA_001453905.1_WH-SGI-V-07273	26604259	WH-SGI-V-07273
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.17269	39.4	-	CMLT01	72	2408	2156	3/23/15	3/11/17	Contig	SC	SAMEA1029337	GCA_001130405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/405/GCA_001130405.1_7054_6_19	-	SMRU3091
Escherichia coli KOEGE 70 (185a)	1281167	PRJNA186269	186269	Proteobacteria	Gammaproteobacteria	5.19681	50.5	-	AWAN01	15	5354	5019	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885879	GCA_000459835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/835/GCA_000459835.1_Esch_coli_KOEGE_70_185a_V1	-	KOEGE 70 (185a)
Mycobacterium tuberculosis T67	668349	PRJNA218191	218191	Terrabacteria group	Actinobacteria	4.40388	65.5	-	JLDB01	13	4278	4095	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02349332	GCA_000667845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/845/GCA_000667845.1_Myco_tube_T67_V2	-	T67
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.05737	37.8	-	FUJX01	25	3144	3045	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72833668	GCA_900162325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/325/GCA_900162325.1_30I08	-	n/a
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.64431	30.6	-	MKBH01	18	1703	1584	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN04532255	GCA_001764765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/765/GCA_001764765.1_ASM176476v1	-	BCW_4743
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001108	1208627	PRJNA170560	170560	Proteobacteria	Gammaproteobacteria	4.76191	52.2	-	JRBN01	185	4834	4589	9/5/14	2/27/17	Contig	FDA	SAMN01816356	GCA_000748765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/765/GCA_000748765.1_CFSAN001108_01.0	-	CFSAN001108
Staphylococcus aureus M0940	1388706	PRJNA216879	216879	Terrabacteria group	Firmicutes	2.8313	32.8	-	JCSJ01	34	2972	2806	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325830	GCA_000545585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/585/GCA_000545585.1_Stap_aure_M0940_V1	-	M0940
Staphylococcus aureus M0941	1388707	PRJNA216880	216880	Terrabacteria group	Firmicutes	2.8056	32.8	-	JCSK01	28	2928	2769	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325831	GCA_000545605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/605/GCA_000545605.1_Stap_aure_M0941_V1	-	M0941
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001109	1208628	PRJNA170561	170561	Proteobacteria	Gammaproteobacteria	4.75796	52.2	-	JRBM01	291	4827	4579	9/5/14	2/26/17	Contig	FDA	SAMN01816357	GCA_000748785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/785/GCA_000748785.1_CFSAN001109_01.0	-	CFSAN001109
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.688	30.7	-	MKBN01	27	1741	1611	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN04532261	GCA_001764895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/895/GCA_001764895.1_ASM176489v1	-	BCW_4755
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	2.96393	37.9	-	FUJR01	14	3037	2944	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72827668	GCA_900162335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/335/GCA_900162335.1_25D07	-	n/a
Mycobacterium tuberculosis OFXR-1	1402583	PRJNA221501	221501	Terrabacteria group	Actinobacteria	4.40989	65.5	-	JLCN01	5	4291	4101	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02364076	GCA_000667865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/865/GCA_000667865.1_Myco_tube_OFXR-1_V1	-	OFXR-1
Escherichia coli KOEGE 71 (186a)	1281168	PRJNA186270	186270	Proteobacteria	Gammaproteobacteria	4.57611	50.5	-	AWAO01	12	4640	4325	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885880	GCA_000459855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/855/GCA_000459855.1_Esch_coli_KOEGE_71_186a_V1	-	KOEGE 71 (186a)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.11616	39.6	-	CNOK02	182	2293	2092	3/23/15	3/5/17	Contig	SC	SAMEA1032428	GCA_001130465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/465/GCA_001130465.2_6925_2_82	-	R34-3063
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.78244	66.2	-	LLUE01	112	6510	6303	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128721	GCA_001453915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/915/GCA_001453915.1_WH-SGI-V-07278	26604259	WH-SGI-V-07278
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.98541	39	-	JWUL03	189	3916	3732	12/29/14	3/18/17	Contig	JCVI	SAMN03084846	GCA_000811585.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/585/GCA_000811585.3_ASM81158v3	-	UH41_486
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.70028	50.7	-	FUDX01	359	5243	4487	1/28/17	2/26/17	Scaffold	SC	SAMEA1569745	GCA_900160575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/575/GCA_900160575.1_8403_8_90	-	sh1474
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.18308	28.5	-	FUUK01	38	3865	3743	2/14/17	2/23/17	Scaffold	SC	SAMEA2239362	GCA_900166445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/445/GCA_900166445.1_11670_1_12	-	CD11
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.6746	57.2	-	FBSI01	99	5784	5548	1/4/16	2/21/17	Contig	UMCG Groningen	SAMEA3515314	GCA_001511375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/375/GCA_001511375.1_ERS822463	-	-
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.92356	64.3	-	FSKM01	16	4883	4730	12/14/16	3/21/17	Scaffold	SC	SAMEA2275754	GCA_900137455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/455/GCA_900137455.1_12163_2_2	-	1028
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.91275	64.3	-	FVPF01	18	4868	4733	3/10/17	3/18/17	Scaffold	SC	SAMEA2275776	GCA_900137465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/465/GCA_900137465.1_12163_2_23	-	1050
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.76307	56.8	-	FBRL01	126	5890	5641	1/4/16	2/21/17	Contig	UMCG Groningen	SAMEA3515297	GCA_001511715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/715/GCA_001511715.1_ERS822446	-	-
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.31372	28.5	-	FUUM01	34	4053	3890	2/14/17	2/23/17	Scaffold	SC	SAMEA2239408	GCA_900166455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/455/GCA_900166455.1_11670_1_60	-	CD57
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.68647	50.7	-	FUDY01	372	5245	4483	1/28/17	2/26/17	Scaffold	SC	SAMEA1569735	GCA_900160585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/585/GCA_900160585.1_8403_8_91	-	sh1475
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.96251	39	-	JWUN03	591	3978	3648	12/29/14	3/18/17	Contig	JCVI	SAMN03084843	GCA_000811605.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/605/GCA_000811605.3_ASM81160v3	-	UH430_478
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.72324	66.1	-	LLUC01	103	6413	6208	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128719	GCA_001454045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/045/GCA_001454045.1_WH-SGI-V-07276	26604259	WH-SGI-V-07276
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09286	39.6	-	CNXU02	160	2267	2060	3/23/15	3/11/17	Contig	SC	SAMEA1463209	GCA_001130485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/485/GCA_001130485.2_7553_4_13	-	ND6132
Escherichia coli KOEGE 73 (195a)	1281169	PRJNA186271	186271	Proteobacteria	Gammaproteobacteria	5.55824	50.7	-	AWAP01	11	5797	5447	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885881	GCA_000459875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/875/GCA_000459875.1_Esch_coli_KOEGE_73_195a_V1	-	KOEGE 73 (195a)
Mycobacterium tuberculosis OFXR-6	1402584	PRJNA221502	221502	Terrabacteria group	Actinobacteria	4.43878	65.5	-	JLCI01	8	4310	4135	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02364077	GCA_000667885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/885/GCA_000667885.1_Myco_tube_OFXR-6_V1	-	OFXR-6
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	2.98594	37.8	-	FUKA01	23	3064	2985	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72838168	GCA_900162345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/345/GCA_900162345.1_33H04	-	n/a
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.64527	30.4	-	MKBO01	51	1722	1632	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN04532262	GCA_001764915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/915/GCA_001764915.1_ASM176491v1	-	BCW_4757
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000204	1173433	PRJNA159291	159291	Proteobacteria	Gammaproteobacteria	4.61458	52.3	-	JRDT01	241	4684	4444	9/5/14	2/26/17	Contig	FDA	SAMN01942252	GCA_000748805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/805/GCA_000748805.1_CFSAN000204_01.0	-	CFSAN000204
Staphylococcus aureus M0942	1388708	PRJNA216881	216881	Terrabacteria group	Firmicutes	2.88831	32.8	-	JCSL01	56	3065	2889	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325832	GCA_000545625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/625/GCA_000545625.1_Stap_aure_M0942_V1	-	M0942
Staphylococcus aureus M0945	1388709	PRJNA216882	216882	Terrabacteria group	Firmicutes	2.85771	32.7	-	JCSM01	57	3030	2874	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325833	GCA_000545645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/645/GCA_000545645.1_Stap_aure_M0945_V1	-	M0945
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000205	1173434	PRJNA159293	159293	Proteobacteria	Gammaproteobacteria	4.64833	52.3	-	JRDS01	175	4727	4480	9/5/14	2/27/17	Contig	FDA	SAMN01942235	GCA_000748825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/825/GCA_000748825.1_CFSAN000205_01.0	-	CFSAN000205
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.89121	30.3	-	MKBP01	52	1982	1807	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN04532263	GCA_001764925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/764/925/GCA_001764925.1_ASM176492v1	-	BCW_5121
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	2.95934	37.9	-	FUJG01	19	3045	2949	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72817918	GCA_900162355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/355/GCA_900162355.1_18C07	-	n/a
Mycobacterium tuberculosis OFXR-8	1402585	PRJNA221503	221503	Terrabacteria group	Actinobacteria	4.40378	65.6	-	JLCG01	7	4294	4103	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02364078	GCA_000667905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/905/GCA_000667905.1_Myco_tube_OFXR-8_V1	-	OFXR-8
Escherichia coli KOEGE 77 (202a)	1281170	PRJNA186272	186272	Proteobacteria	Gammaproteobacteria	5.37607	50.6	-	AWAQ01	11	5492	5094	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885882	GCA_000459895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/895/GCA_000459895.1_Esch_coli_KOEGE_77_202a_V1	-	KOEGE 77 (202a)
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.0666	39.7	-	CLEP01	71	2273	2058	3/21/15	3/11/17	Contig	SC	SAMEA1025746	GCA_001130565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/565/GCA_001130565.1_6899_6_21	-	SMRU2085
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.83113	66.2	-	LLUD01	89	6571	6377	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128720	GCA_001454065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/065/GCA_001454065.1_WH-SGI-V-07277	26604259	WH-SGI-V-07277
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.9884	39	-	JWUJ03	181	3908	3723	12/29/14	3/18/17	Contig	JCVI	SAMN03084848	GCA_000811625.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/625/GCA_000811625.3_ASM81162v3	-	UH41_488
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.61878	50.8	-	FUEB01	348	5136	4403	1/28/17	2/26/17	Scaffold	SC	SAMEA1569725	GCA_900160595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/595/GCA_900160595.1_8403_8_93	-	sh1477
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.1322	28.5	-	FUUJ01	39	3830	3704	2/14/17	2/23/17	Scaffold	SC	SAMEA2239364	GCA_900166465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/465/GCA_900166465.1_11670_1_14	-	CD13
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.58836	57.1	-	JTFX01	120	5723	5495	1/19/16	2/21/17	Contig	unverisity medical center groningen	SAMN03178258	GCA_001517715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/715/GCA_001517715.1_ASM151771v1	26067658	M098440
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.86812	64.2	-	FWCQ01	8	4898	4766	3/16/17	3/24/17	Scaffold	SC	SAMEA2275775	GCA_900137475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/475/GCA_900137475.1_12163_2_22	-	1049
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.90097	64.2	-	FVPI01	8	4919	4788	3/10/17	3/18/17	Scaffold	SC	SAMEA2275778	GCA_900137485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/485/GCA_900137485.1_12163_2_25	-	1052
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.58503	57.1	-	JTFU01	133	5735	5494	1/19/16	2/21/17	Contig	unverisity medical center groningen	SAMN03178224	GCA_001517735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/735/GCA_001517735.1_ASM151773v1	26067658	M097273
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.07695	28.6	-	FUUO01	23	3720	3598	2/14/17	2/23/17	Scaffold	SC	SAMEA2239363	GCA_900166475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/475/GCA_900166475.1_11670_1_13	-	CD12
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.77622	50.5	-	FUEA01	381	5359	4553	1/28/17	2/26/17	Scaffold	SC	SAMEA1569710	GCA_900160605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/605/GCA_900160605.1_8403_8_92	-	sh1476
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.10617	39	-	JWUM03	314	4075	3825	12/29/14	3/18/17	Contig	JCVI	SAMN03084844	GCA_000811645.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/645/GCA_000811645.3_ASM81164v3	-	UH381_482
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.85319	66	-	LLUN01	95	6653	6434	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128730	GCA_001454125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/125/GCA_001454125.1_WH-SGI-V-07290	26604259	WH-SGI-V-07290
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.07514	39.5	-	CMDQ01	53	2278	2048	3/21/15	3/11/17	Contig	SC	SAMEA1028673	GCA_001130605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/605/GCA_001130605.1_7011_3_7	-	SMRU2743
Escherichia coli KOEGE 118 (317a)	1281171	PRJNA186273	186273	Proteobacteria	Gammaproteobacteria	5.08016	50.6	-	AWAR01	4	5011	4743	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885883	GCA_000459915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/915/GCA_000459915.1_Esch_coli_KOEGE_118_317a_V1	-	KOEGE 118 (317a)
Mycobacterium tuberculosis OFXR-17	1402587	PRJNA221505	221505	Terrabacteria group	Actinobacteria	4.40893	65.6	-	JLBX01	7	4294	4102	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02364080	GCA_000667935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/935/GCA_000667935.1_Myco_tube_OFXR-17_V1	-	OFXR-17
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	2.96139	37.9	-	FUJO01	20	3011	2924	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72825418	GCA_900162365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/365/GCA_900162365.1_22B09	-	n/a
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.77452	30.3	-	MKBT01	49	1853	1714	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN04532267	GCA_001765015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/015/GCA_001765015.1_ASM176501v1	-	BCW_5125
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000206	1173458	PRJNA159341	159341	Proteobacteria	Gammaproteobacteria	4.57382	52.3	-	JRDR01	71	4609	4396	9/5/14	2/26/17	Contig	FDA	SAMN01942263	GCA_000748845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/845/GCA_000748845.1_CFSAN000206_01.0	-	CFSAN000206
Staphylococcus aureus M0947	1388710	PRJNA216883	216883	Terrabacteria group	Firmicutes	2.87438	32.8	-	JCSN01	46	3020	2862	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325834	GCA_000545665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/665/GCA_000545665.1_Stap_aure_M0947_V1	-	M0947
Staphylococcus aureus M0948	1388711	PRJNA216884	216884	Terrabacteria group	Firmicutes	2.87308	32.8	-	JCSO01	16	3014	2850	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325835	GCA_000545685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/685/GCA_000545685.1_Stap_aure_M0948_V1	-	M0948
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000207	1173435	PRJNA159295	159295	Proteobacteria	Gammaproteobacteria	4.7026	52.1	-	JRDQ01	77	4792	4558	9/5/14	2/26/17	Contig	FDA	SAMN01942251	GCA_000748865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/865/GCA_000748865.1_CFSAN000207_01.0	-	CFSAN000207
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.79732	30.1	-	MKBV01	116	1876	1715	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN04532269	GCA_001765055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/055/GCA_001765055.1_ASM176505v1	-	BCW_5128
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.00541	37.8	-	FUJI01	16	3043	2964	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72820918	GCA_900162375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/375/GCA_900162375.1_19B07	-	n/a
Mycobacterium tuberculosis OFXR-18	1402588	PRJNA221506	221506	Terrabacteria group	Actinobacteria	4.40333	65.6	-	JLBW01	4	4280	4118	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02364081	GCA_000667955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/955/GCA_000667955.1_Myco_tube_OFXR-18_V1	-	OFXR-18
Escherichia coli KOEGE 131 (358a)	1281172	PRJNA186274	186274	Proteobacteria	Gammaproteobacteria	5.21368	50.7	-	AWAS01	8	5334	5009	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885884	GCA_000459935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/935/GCA_000459935.1_Esch_coli_KOEGE_131_358a_V1	-	KOEGE 131 (358a)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04322	39.7	-	COFT02	125	2231	2024	3/22/15	3/5/17	Contig	SC	SAMEA1462977	GCA_001130665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/665/GCA_001130665.2_7622_5_91	-	ND6085
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.58332	66.3	-	LLUP01	120	6298	6067	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128732	GCA_001454165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/165/GCA_001454165.1_WH-SGI-V-07293	26604259	WH-SGI-V-07293
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.96429	39.1	-	JWUK03	213	3882	3706	12/29/14	3/18/17	Contig	JCVI	SAMN03084847	GCA_000811665.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/665/GCA_000811665.3_ASM81166v3	-	UH41_487
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.62534	50.8	-	FUEC01	358	5147	4400	1/28/17	2/26/17	Scaffold	SC	SAMEA1569704	GCA_900160615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/160/615/GCA_900160615.1_8403_8_94	-	sh1478
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.07706	28.6	-	FUUP01	24	3722	3603	2/14/17	2/23/17	Scaffold	SC	SAMEA2239397	GCA_900166485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/485/GCA_900166485.1_11670_1_49	-	CD46
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.59495	57.1	-	JTFZ01	129	5744	5515	1/19/16	2/21/17	Contig	unverisity medical center groningen	SAMN03178260	GCA_001517795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/795/GCA_001517795.1_ASM151779v1	26067658	M098442
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.1886	64	-	FSKP01	25	5211	5087	12/14/16	3/21/17	Scaffold	SC	SAMEA2275777	GCA_900137495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/495/GCA_900137495.1_12163_2_24	-	1051
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.94064	64.2	-	FSKQ01	14	4937	4804	12/14/16	3/22/17	Scaffold	SC	SAMEA2275779	GCA_900137505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/505/GCA_900137505.1_12163_2_26	-	1053
Klebsiella pneumoniae	573	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.58451	57	-	LRMQ01	5	5672	5224	1/25/16	2/21/17	Contig	US Food and Drug Administration 	SAMN03996264	GCA_001534855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/855/GCA_001534855.1_ASM153485v1	-	FDAARGOS_89
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.18159	28.3	-	FUUR01	30	3922	3787	2/14/17	2/23/17	Scaffold	SC	SAMEA2239392	GCA_900166495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/495/GCA_900166495.1_11670_1_44	-	CD41
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.81616	50.4	-	FUFW01	405	5462	4583	2/7/17	2/26/17	Scaffold	SC	SAMEA1569816	GCA_900162735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/735/GCA_900162735.1_8489_1_72	-	sh1360
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.99298	39	-	JWUI03	188	3910	3736	12/29/14	3/18/17	Contig	JCVI	SAMN03084849	GCA_000811685.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/685/GCA_000811685.3_ASM81168v3	-	UH41_489
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.74746	66.1	-	LLUR01	116	6552	6313	11/30/15	3/24/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128734	GCA_001454205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/205/GCA_001454205.1_WH-SGI-V-07295	26604259	WH-SGI-V-07295
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15903	39.7	-	CKRO01	71	2304	2056	3/21/15	3/10/17	Contig	SC	SAMEA1023841	GCA_001130705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/705/GCA_001130705.1_6680_8_17	-	SMRU209
Escherichia coli UMEA 3014-1	1281173	PRJNA186275	186275	Proteobacteria	Gammaproteobacteria	5.08083	50.5	-	AWAT01	10	5185	4850	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885885	GCA_000459955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/955/GCA_000459955.1_Esch_coli_UMEA_3014-1_V1	-	UMEA 3014-1
Mycobacterium tuberculosis OFXR-19	1402589	PRJNA221507	221507	Terrabacteria group	Actinobacteria	4.40168	65.5	-	JLBV01	3	4296	4099	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02364082	GCA_000667975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/975/GCA_000667975.1_Myco_tube_OFXR-19_V1	-	OFXR-19
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	2.95379	37.8	-	FUJJ01	18	2997	2912	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72818668	GCA_900162385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/385/GCA_900162385.1_18F03	-	n/a
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.79503	30.3	-	MKCF01	95	1888	1698	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN04532279	GCA_001765255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/255/GCA_001765255.1_ASM176525v1	-	BCW_5143
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000208	1173451	PRJNA159327	159327	Proteobacteria	Gammaproteobacteria	4.82503	52.2	-	JRDP01	244	4942	4672	9/5/14	2/27/17	Contig	FDA	SAMN01942288	GCA_000748885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/885/GCA_000748885.1_CFSAN000208_01.0	-	CFSAN000208
Staphylococcus aureus M0951	1388714	PRJNA216887	216887	Terrabacteria group	Firmicutes	2.95262	32.9	-	JCSP01	101	3149	2943	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325838	GCA_000545705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/705/GCA_000545705.1_Stap_aure_M0951_V1	-	M0951
Staphylococcus aureus M0954	1388716	PRJNA216889	216889	Terrabacteria group	Firmicutes	2.86686	32.9	-	JCSQ01	22	3012	2840	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325840	GCA_000545725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/725/GCA_000545725.1_Stap_aure_M0954_V1	-	M0954
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000209	1173436	PRJNA159297	159297	Proteobacteria	Gammaproteobacteria	4.66235	52.2	-	JRDO01	65	4738	4526	9/5/14	2/26/17	Contig	FDA	SAMN00862094	GCA_000748905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/905/GCA_000748905.1_CFSAN000209_01.0	-	CFSAN000209
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.75237	30.3	-	MKCH01	65	1828	1692	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN04532281	GCA_001765295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/295/GCA_001765295.1_ASM176529v1	-	BCW_5145
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	2.96792	37.9	-	FUKC01	21	3050	2948	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72835168	GCA_900162395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/395/GCA_900162395.1_32B03	-	n/a
Mycobacterium tuberculosis OFXR-20	1402590	PRJNA221508	221508	Terrabacteria group	Actinobacteria	4.423	65.6	-	JLBU01	4	4298	4139	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02364083	GCA_000667995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/667/995/GCA_000667995.1_Myco_tube_OFXR-20_V1	-	OFXR-20
Escherichia coli UMEA 3022-1	1281174	PRJNA186276	186276	Proteobacteria	Gammaproteobacteria	5.08441	50.4	-	AWAU01	10	5168	4843	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885886	GCA_000459975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/975/GCA_000459975.1_Esch_coli_UMEA_3022-1_V1	-	UMEA 3022-1
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.19519	39.5	-	CKAY01	78	2439	2177	3/21/15	3/10/17	Contig	SC	SAMEA974631	GCA_001130765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/765/GCA_001130765.1_6259_7_17	-	14
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.00646	65.8	-	LLUS01	114	6728	6474	11/30/15	3/24/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128735	GCA_001454225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/225/GCA_001454225.1_WH-SGI-V-07296	26604259	WH-SGI-V-07296
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.98542	39	-	JWUH03	170	3900	3722	12/29/14	3/18/17	Contig	JCVI	SAMN03084850	GCA_000811705.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/705/GCA_000811705.3_ASM81170v3	-	UH41_490
Shigella sonnei	624	PRJEB9146	295160	Proteobacteria	Gammaproteobacteria	4.87146	50.4	-	FUFX01	418	5619	4668	2/7/17	2/26/17	Scaffold	SC	SAMEA3356022	GCA_900162765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/765/GCA_900162765.1_16703_8_4	-	3626STDY6095479
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.22445	28.5	-	FUUQ01	53	3959	3820	2/14/17	2/23/17	Scaffold	SC	SAMEA2239359	GCA_900166505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/505/GCA_900166505.1_11670_1_9	-	CD08
Klebsiella pneumoniae	573	PRJNA309602	309602	Proteobacteria	Gammaproteobacteria	5.57837	57.3	-	LROX01	60	5529	5289	2/5/16	2/21/17	Contig	Lab of Forest Resource protection and Utilization	SAMN04437103	GCA_001549975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/975/GCA_001549975.1_ASM154997v1	-	GPKP
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96849	64.2	-	FSKS01	29	4967	4817	12/14/16	3/22/17	Scaffold	SC	SAMEA2275781	GCA_900137515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/515/GCA_900137515.1_12163_2_28	-	1055
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21838	64.2	-	FSKR01	80	5262	5061	12/14/16	3/21/17	Scaffold	SC	SAMEA2275780	GCA_900137525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/525/GCA_900137525.1_12163_2_27	-	1054
Klebsiella pneumoniae	573	PRJNA309612	309612	Proteobacteria	Gammaproteobacteria	5.39744	57.3	-	LROW01	59	5390	5159	2/5/16	2/21/17	Contig	Lab of Forest Resource protection and Utilization	SAMN04437144	GCA_001549995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/549/995/GCA_001549995.1_ASM154999v1	-	LPKP
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.54373	28.5	-	FUUS01	86	4364	4166	2/14/17	2/23/17	Scaffold	SC	SAMEA2239407	GCA_900166515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/515/GCA_900166515.1_11670_1_59	-	CD56
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.78843	50.5	-	FUGB01	433	5441	4544	2/7/17	2/26/17	Scaffold	SC	SAMEA2054639	GCA_900162785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/785/GCA_900162785.1_9803_4_45	-	2090STDY5461863
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.97099	39	-	JWUG03	202	3895	3704	12/29/14	3/18/17	Contig	JCVI	SAMN03084851	GCA_000811725.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/725/GCA_000811725.3_ASM81172v3	-	UH41_491
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.77258	66.1	-	LLUT01	132	6496	6257	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128736	GCA_001454235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/235/GCA_001454235.1_WH-SGI-V-07297	26604259	WH-SGI-V-07297
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00426	39.7	-	CNOL02	127	2147	1954	3/23/15	3/11/17	Contig	SC	SAMEA1032517	GCA_001130805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/805/GCA_001130805.2_6925_2_87	-	R34-3069
Escherichia coli UMEA 3033-1	1281175	PRJNA186277	186277	Proteobacteria	Gammaproteobacteria	5.39334	50.6	-	AWAV01	11	5610	5208	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885887	GCA_000459995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/459/995/GCA_000459995.1_Esch_coli_UMEA_3033-1_V1	-	UMEA 3033-1
Mycobacterium tuberculosis OFXR-21	1402591	PRJNA221509	221509	Terrabacteria group	Actinobacteria	4.40882	65.6	-	JLBT01	2	4284	4116	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02364084	GCA_000668015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/015/GCA_000668015.1_Myco_tube_OFXR-21_V1	-	OFXR-21
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.17229	37.8	-	FUKB01	26	3287	3180	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72832918	GCA_900162405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/405/GCA_900162405.1_30I03	-	n/a
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.76481	30.3	-	MKCI01	60	1852	1725	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN04532282	GCA_001765315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/315/GCA_001765315.1_ASM176531v1	-	BCW_5146
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000210	1173437	PRJNA159299	159299	Proteobacteria	Gammaproteobacteria	4.57386	52.3	-	JRDN01	62	4599	4388	9/5/14	2/27/17	Contig	FDA	SAMN01942239	GCA_000748925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/925/GCA_000748925.1_CFSAN000210_01.0	-	CFSAN000210
Staphylococcus aureus M0955	1388717	PRJNA216890	216890	Terrabacteria group	Firmicutes	2.86108	32.9	-	JCSR01	67	3013	2815	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325841	GCA_000545745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/745/GCA_000545745.1_Stap_aure_M0955_V1	-	M0955
Staphylococcus aureus M0956	1388718	PRJNA216891	216891	Terrabacteria group	Firmicutes	2.88935	32.8	-	JCSS01	57	3052	2873	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325842	GCA_000545765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/765/GCA_000545765.1_Stap_aure_M0956_V1	-	M0956
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000235	1173471	PRJNA159367	159367	Proteobacteria	Gammaproteobacteria	4.94376	52.1	-	JRCT01	104	5060	4793	9/5/14	2/27/17	Contig	FDA	SAMN01942292	GCA_000748945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/945/GCA_000748945.1_CFSAN000235_01.0	-	CFSAN000235
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.79435	30.1	-	MKCL01	98	1885	1741	10/4/16	3/20/17	Scaffold	University of California at Davis	SAMN04532285	GCA_001765365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/365/GCA_001765365.1_ASM176536v1	-	BCW_5150
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.10072	37.9	-	FUKE01	28	3196	3112	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72834418	GCA_900162415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/415/GCA_900162415.1_31H06	-	n/a
Mycobacterium tuberculosis OFXR-22	1402592	PRJNA221510	221510	Terrabacteria group	Actinobacteria	4.44719	65.6	-	JLBS01	6	4317	4102	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02364085	GCA_000668035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/035/GCA_000668035.1_Myco_tube_OFXR-22_V1	-	OFXR-22
Escherichia coli UMEA 3041-1	1281176	PRJNA186278	186278	Proteobacteria	Gammaproteobacteria	5.37255	50.7	-	AWAW01	10	5480	5129	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885888	GCA_000460015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/015/GCA_000460015.1_Esch_coli_UMEA_3041-1_V1	-	UMEA 3041-1
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.10078	39.6	-	CPQN01	76	2285	2068	3/23/15	3/10/17	Contig	SC	SAMEA1020037	GCA_001130825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/825/GCA_001130825.1_5901_2_3	-	1014-00
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.21398	66.1	-	LLUX01	64	5943	5767	11/30/15	3/24/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128740	GCA_001454285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/285/GCA_001454285.1_WH-SGI-V-07306	26604259	WH-SGI-V-07306
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.0526	39	-	JWUE03	130	3941	3805	12/29/14	3/18/17	Contig	JCVI	SAMN03084853	GCA_000811745.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/745/GCA_000811745.3_ASM81174v3	-	UH225_493
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.69122	50.7	-	FUFZ01	374	5233	4479	2/7/17	2/26/17	Scaffold	SC	SAMEA2054468	GCA_900162795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/795/GCA_900162795.1_9789_6_88	-	2090STDY5461810
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.0741	28.5	-	FUUT01	33	3784	3633	2/14/17	2/23/17	Scaffold	SC	SAMEA2239421	GCA_900166525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/525/GCA_900166525.1_11670_1_73	-	CD70
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA295649	295649	Proteobacteria	Gammaproteobacteria	5.6799	57.2	-	LKAB01	98	5660	5386	2/23/16	2/21/17	Contig	Istituto Superiore di Sanita	SAMN04075657	GCA_001566595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/595/GCA_001566595.1_ASM156659v1	27056222	KP48
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.27916	64.1	-	FSKT01	35	5257	5107	12/14/16	3/21/17	Scaffold	SC	SAMEA2275756	GCA_900137545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/545/GCA_900137545.1_12163_2_3	-	1030
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.51361	63.9	-	FVPH01	97	5685	5454	3/10/17	3/18/17	Scaffold	SC	SAMEA2275783	GCA_900137555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/555/GCA_900137555.1_12163_2_30	-	1057
Klebsiella pneumoniae subsp. pneumoniae NBRC 14940	1218099	PRJDB272	172095	Proteobacteria	Gammaproteobacteria	5.463	57	-	BCTV01	141	5424	5142	2/23/16	2/21/17	Contig	National Institute of Technology and Evaluation	SAMD00046711	GCA_001590945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/590/945/GCA_001590945.1_ASM159094v1	-	NBRC 14940
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.15547	28.4	-	FUUU01	52	3906	3738	2/14/17	2/23/17	Scaffold	SC	SAMEA2239366	GCA_900166535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/535/GCA_900166535.1_11670_1_16	-	CD15
Shigella sonnei	624	PRJEB2846	204571	Proteobacteria	Gammaproteobacteria	4.64603	50.8	-	FUGH01	370	5174	4443	2/8/17	2/26/17	Scaffold	SC	SAMEA954713	GCA_900163485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/163/485/GCA_900163485.1_8403_8_76	-	sh1460
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.05986	39	-	JWUF03	133	3944	3816	12/29/14	3/18/17	Contig	JCVI	SAMN03084852	GCA_000811765.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/765/GCA_000811765.3_ASM81176v3	-	UH225_492
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.70178	66.1	-	LLUY01	136	6434	6217	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128741	GCA_001454305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/305/GCA_001454305.1_WH-SGI-V-07309	26604259	WH-SGI-V-07309
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15365	39.6	-	CKHQ01	70	2368	2154	3/21/15	3/10/17	Contig	SC	SAMEA1023723	GCA_001130845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/845/GCA_001130845.1_6631_2_23	-	23A
Escherichia coli UMEA 3052-1	1281177	PRJNA186279	186279	Proteobacteria	Gammaproteobacteria	5.03949	50.8	-	AWAX01	11	5182	4767	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885889	GCA_000460035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/035/GCA_000460035.1_Esch_coli_UMEA_3052-1_V1	-	UMEA 3052-1
Mycobacterium tuberculosis OFXR-23	1402593	PRJNA221511	221511	Terrabacteria group	Actinobacteria	4.39934	65.6	-	JLBR01	3	4271	4084	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02364086	GCA_000668055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/055/GCA_000668055.1_Myco_tube_OFXR-23_V1	-	OFXR-23
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.1725	37.8	-	FUJT01	35	3288	3181	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72830668	GCA_900162425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/425/GCA_900162425.1_27B01	-	n/a
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.7709	30.3	-	MKHS01	56	1832	1670	10/6/16	3/20/17	Scaffold	University of California at Davis	SAMN04532295	GCA_001856915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/915/GCA_001856915.1_ASM185691v1	-	BCW_5161
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000236	1173472	PRJNA159369	159369	Proteobacteria	Gammaproteobacteria	4.75091	52	-	JRCS01	197	4875	4571	9/5/14	2/26/17	Contig	FDA	SAMN01942248	GCA_000748965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/965/GCA_000748965.1_CFSAN000236_01.0	-	CFSAN000236
Staphylococcus aureus M0957	1388719	PRJNA216892	216892	Terrabacteria group	Firmicutes	2.82796	32.8	-	JCST01	29	2971	2800	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325843	GCA_000545785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/785/GCA_000545785.1_Stap_aure_M0957_V1	-	M0957
Staphylococcus aureus M0960	1388721	PRJNA216894	216894	Terrabacteria group	Firmicutes	2.92557	32.9	-	JCSU01	70	3073	2893	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325845	GCA_000545805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/805/GCA_000545805.1_Stap_aure_M0960_V1	-	M0960
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000662	1182173	PRJNA162803	162803	Proteobacteria	Gammaproteobacteria	4.76027	52.2	-	JRCR01	175	4826	4591	9/5/14	2/27/17	Contig	FDA	SAMN00991043	GCA_000748985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/985/GCA_000748985.1_CFSAN000662_01.0	-	CFSAN000662
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.77196	30.4	-	MKHT01	34	1842	1691	10/6/16	3/20/17	Scaffold	University of California at Davis	SAMN04532296	GCA_001856925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/925/GCA_001856925.1_ASM185692v1	-	BCW_5162
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.17154	37.8	-	FUJE01	24	3284	3183	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72815668	GCA_900162435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/435/GCA_900162435.1_16J10_2	-	n/a
Mycobacterium tuberculosis OFXR-25	1402595	PRJNA221513	221513	Terrabacteria group	Actinobacteria	4.40146	65.5	-	JLBQ01	6	4278	4101	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02364088	GCA_000668075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/075/GCA_000668075.1_Myco_tube_OFXR-25_V1	-	OFXR-25
Escherichia coli UMEA 3053-1	1281178	PRJNA186280	186280	Proteobacteria	Gammaproteobacteria	5.20248	50.3	-	AWAY01	16	5302	4941	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885890	GCA_000460055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/055/GCA_000460055.1_Esch_coli_UMEA_3053-1_V1	-	UMEA 3053-1
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.05698	39.7	-	CLBY01	68	2257	2051	3/21/15	3/10/17	Contig	SC	SAMEA1025926	GCA_001130885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/885/GCA_001130885.1_6871_2_13	-	SMRU1837
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.48144	66.4	-	LLVB01	46	6189	5990	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128744	GCA_001454335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/335/GCA_001454335.1_WH-SGI-V-07312	26604259	WH-SGI-V-07312
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.99476	39	-	JWUD03	172	3919	3739	12/29/14	3/18/17	Contig	JCVI	SAMN03084854	GCA_000811785.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/785/GCA_000811785.3_ASM81178v3	-	UH326_495
Mycoplasma mycoides subsp. mycoides SC str. Gladysdale	865867	PRJNA27713	27713	Terrabacteria group	Tenericutes	1.19381	24	chromosome:NC_021025.1/CP002107.1	-	1	1139	1016	7/26/10	3/29/17	Complete Genome	JCVI	SAMN02603457	GCA_000143865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/143/865/GCA_000143865.1_ASM14386v1	22843585	Gladysdale
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.41262	28.5	-	FUUV01	32	4167	4012	2/14/17	2/23/17	Scaffold	SC	SAMEA2239384	GCA_900166545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/545/GCA_900166545.1_11670_1_35	-	CD33
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.48661	57.2	-	JXJB01	104	5485	5209	3/24/16	2/21/17	Contig	unverisity medical center groningen	SAMN03281077	GCA_001596995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/995/GCA_001596995.1_ASM159699v1	26864946	KPOII-10
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.91311	64.3	-	FSKV01	17	4878	4731	12/14/16	3/21/17	Scaffold	SC	SAMEA2275785	GCA_900137565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/565/GCA_900137565.1_12163_2_33	-	1059
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.08246	64.1	-	FVPG01	23	5085	4972	3/10/17	3/18/17	Scaffold	SC	SAMEA2275787	GCA_900137575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/575/GCA_900137575.1_12163_2_35	-	1061
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.68361	56.8	-	JXJF01	84	5717	5431	3/24/16	2/21/17	Contig	unverisity medical center groningen	SAMN03281110	GCA_001597035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/035/GCA_001597035.1_ASM159703v1	26864946	KP-45D
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	3.8419	28.2	-	FUUW01	53	3533	3378	2/14/17	2/23/17	Scaffold	SC	SAMEA2239354	GCA_900166555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/555/GCA_900166555.1_11670_1_3	-	CD03
Shigella sonnei 53G	216599	PRJNA48265	48265	Proteobacteria	Gammaproteobacteria	5.18598	50.7	-	ADUU01	150	5879	5761	2/10/11	2/28/12	Contig	Institute for Genome Sciences	SAMN00792435	GCA_000188795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/795/GCA_000188795.2_ASM18879v2	-	53G
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.86251	38.8	-	JWUC03	136	3748	3579	12/29/14	3/18/17	Contig	JCVI	SAMN03084856	GCA_000811805.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/805/GCA_000811805.3_ASM81180v3	-	UH392_536
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.93284	65.8	-	LLVJ01	144	6735	6443	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128752	GCA_001454465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/465/GCA_001454465.1_WH-SGI-V-07323	26604259	WH-SGI-V-07323
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08804	39.5	-	CKSI01	74	2279	2064	3/21/15	3/10/17	Contig	SC	SAMEA1026140	GCA_001130965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/965/GCA_001130965.1_6823_1_20	-	SMRU1868
Escherichia coli UMEA 3065-1	1281179	PRJNA186281	186281	Proteobacteria	Gammaproteobacteria	5.18966	50.7	-	AWAZ01	6	5355	5012	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885891	GCA_000460075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/075/GCA_000460075.1_Esch_coli_UMEA_3065-1_V1	-	UMEA 3065-1
Mycobacterium tuberculosis OFXR-26	1402596	PRJNA221514	221514	Terrabacteria group	Actinobacteria	4.40857	65.5	-	JLBP01	2	4292	4091	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02364089	GCA_000668095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/095/GCA_000668095.1_Myco_tube_OFXR-26_V1	-	OFXR-26
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.27759	37.7	-	FUIR01	48	3402	3272	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72814168	GCA_900162445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/445/GCA_900162445.1_16J08	-	n/a
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.80393	30.1	-	MKHW01	68	1893	1739	10/6/16	3/20/17	Scaffold	University of California at Davis	SAMN04532299	GCA_001856985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/985/GCA_001856985.1_ASM185698v1	-	BCW_5170
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000669	1182174	PRJNA162805	162805	Proteobacteria	Gammaproteobacteria	4.76462	52.2	-	JRCQ01	59	4823	4597	9/5/14	2/26/17	Contig	FDA	SAMN00991044	GCA_000749005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/005/GCA_000749005.1_CFSAN000669_01.0	-	CFSAN000669
Staphylococcus aureus M0961	1388722	PRJNA216895	216895	Terrabacteria group	Firmicutes	2.85652	32.8	-	JCSV01	57	3021	2849	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325846	GCA_000545825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/825/GCA_000545825.1_Stap_aure_M0961_V1	-	M0961
Staphylococcus aureus M0965	1388725	PRJNA216898	216898	Terrabacteria group	Firmicutes	2.89011	32.8	-	JCSW01	47	3073	2885	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325849	GCA_000545845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/845/GCA_000545845.1_Stap_aure_M0965_V1	-	M0965
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000680	1182175	PRJNA162807	162807	Proteobacteria	Gammaproteobacteria	4.84758	52.2	-	JRCP01	195	4960	4698	9/5/14	2/27/17	Contig	FDA	SAMN00991045	GCA_000749025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/025/GCA_000749025.1_CFSAN000680_01.0	-	CFSAN000680
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.76416	30.2	-	MKHX01	117	1849	1706	10/6/16	3/20/17	Scaffold	University of California at Davis	SAMN04532300	GCA_001857005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/005/GCA_001857005.1_ASM185700v1	-	BCW_5171
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.00609	37.8	-	FUJC01	24	3087	2994	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72823168	GCA_900162455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/455/GCA_900162455.1_19D07	-	n/a
Mycobacterium tuberculosis OFXR-27	1402597	PRJNA221515	221515	Terrabacteria group	Actinobacteria	4.43697	65.5	-	JLBO01	6	4310	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02364090	GCA_000668115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/115/GCA_000668115.1_Myco_tube_OFXR-27_V1	-	OFXR-27
Escherichia coli UMEA 3087-1	1281180	PRJNA186282	186282	Proteobacteria	Gammaproteobacteria	5.15813	50.4	-	AWBA01	16	5248	4899	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885892	GCA_000460095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/095/GCA_000460095.1_Esch_coli_UMEA_3087-1_V1	-	UMEA 3087-1
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.0868	39.5	-	CMNK01	69	2315	2090	3/23/15	3/10/17	Contig	SC	SAMEA1029414	GCA_001131045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/045/GCA_001131045.1_7092_6_5	-	SMRU3101
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.15727	66.4	-	LLTC01	60	5864	5710	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128693	GCA_001454585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/585/GCA_001454585.1_WH-SGI-V-07708	26604259	WH-SGI-V-07708
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.96514	39	-	JWUB03	200	3876	3694	12/29/14	3/18/17	Contig	JCVI	SAMN03084857	GCA_000811825.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/825/GCA_000811825.3_ASM81182v3	-	UH355_545
Shigella sonnei 3226-85	766162	PRJNA49105	49105	Proteobacteria	Gammaproteobacteria	4.97588	51.1	-	AKNC01	106	5405	5264	6/14/12	11/19/13	Contig	Institute for Genome Sciences	SAMN00210757	GCA_000268045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/045/GCA_000268045.1_ASM26804v1	-	3226-85
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.18398	28.5	-	FUUX01	42	3872	3744	2/14/17	2/23/17	Scaffold	SC	SAMEA2239412	GCA_900166565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/565/GCA_900166565.1_11670_1_64	-	CD61
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.51711	57.2	-	JXJD01	94	5527	5258	3/24/16	2/21/17	Contig	unverisity medical center groningen	SAMN03281082	GCA_001597195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/195/GCA_001597195.1_ASM159719v1	26864946	KPEII-2
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.4761	64.1	-	FSKW01	68	5603	5373	12/14/16	3/21/17	Scaffold	SC	SAMEA2275786	GCA_900137585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/585/GCA_900137585.1_12163_2_34	-	1060
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.30926	64.1	-	FSKU01	46	5388	5177	12/14/16	3/22/17	Scaffold	SC	SAMEA2275784	GCA_900137595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/595/GCA_900137595.1_12163_2_32	-	1058
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.51445	57.2	-	LDOY01	112	5527	5247	3/24/16	2/21/17	Contig	unverisity medical center groningen	SAMN03734957	GCA_001597245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/245/GCA_001597245.1_CLC_bio	26864946	KP-10
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.09803	28.3	-	FUXO01	28	3821	3655	3/4/17	3/10/17	Scaffold	SC	SAMEA3375066	GCA_900167585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/585/GCA_900167585.1_16852_2_94	-	VRECD0111
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	0.306668	51.9	-	CXOA01	4	294	293	7/16/15	9/30/15	Contig	SC	SAMEA2055844	GCA_001255495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/495/GCA_001255495.1_9870_7_6	-	144374
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.24747	38.9	-	JWUA01	254	-	-	-	-	Contig	JCVI	SAMN03084858	GCA_000811845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/845/GCA_000811845.1_ASM81184v1	-	UH355_546
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.76337	66.1	-	LLTZ01	115	6492	6271	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128716	GCA_001454595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/595/GCA_001454595.1_WH-SGI-V-07268	26604259	WH-SGI-V-07268
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.04406	39.5	-	CMJG01	90	2236	2016	3/22/15	3/10/17	Contig	SC	SAMEA1029384	GCA_001131065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/065/GCA_001131065.1_7038_7_5	-	SMRU3005
Escherichia coli UMEA 3088-1	1281181	PRJNA186283	186283	Proteobacteria	Gammaproteobacteria	5.4458	50.4	-	AWBB01	7	5607	5194	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885893	GCA_000460115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/115/GCA_000460115.1_Esch_coli_UMEA_3088-1_V1	-	UMEA 3088-1
Mycobacterium tuberculosis OFXR-29	1402598	PRJNA221516	221516	Terrabacteria group	Actinobacteria	4.41258	65.6	-	JLBM01	8	4294	4119	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02364091	GCA_000668135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/135/GCA_000668135.1_Myco_tube_OFXR-29_V1	-	OFXR-29
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	2.95334	37.8	-	FUJB01	16	2992	2913	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72819418	GCA_900162465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/465/GCA_900162465.1_18F07	-	n/a
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.75717	30.2	-	MKHZ01	98	1850	1693	10/6/16	3/20/17	Scaffold	University of California at Davis	SAMN04532302	GCA_001857025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/025/GCA_001857025.1_ASM185702v1	-	BCW_5174
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000700	1182176	PRJNA162809	162809	Proteobacteria	Gammaproteobacteria	4.7646	52.2	-	JRCO01	82	4837	4602	9/5/14	2/26/17	Contig	FDA	SAMN00991046	GCA_000749045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/045/GCA_000749045.1_CFSAN000700_01.0	-	CFSAN000700
Staphylococcus aureus M0966	1388726	PRJNA216899	216899	Terrabacteria group	Firmicutes	2.80339	32.8	-	JCSX01	26	2917	2772	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325850	GCA_000545865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/865/GCA_000545865.1_Stap_aure_M0966_V1	-	M0966
Staphylococcus aureus M0967	1388727	PRJNA216900	216900	Terrabacteria group	Firmicutes	2.89111	32.9	-	JCSY01	70	3047	2850	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325851	GCA_000545885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/885/GCA_000545885.1_Stap_aure_M0967_V1	-	M0967
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752	1182177	PRJNA162811	162811	Proteobacteria	Gammaproteobacteria	4.86948	52.1	-	JRCN01	107	4968	4726	9/5/14	2/26/17	Contig	FDA	SAMN00991047	GCA_000749065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/065/GCA_000749065.1_CFSAN000752_01.0	-	CFSAN000752
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.66552	30.7	-	MKIA01	35	1743	1612	10/6/16	3/20/17	Scaffold	University of California at Davis	SAMN05563504	GCA_001857115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/115/GCA_001857115.1_ASM185711v1	-	BCW_6934
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.00601	37.8	-	FUJN01	18	3050	2964	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72826168	GCA_900162475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/475/GCA_900162475.1_23A07	-	n/a
Mycobacterium tuberculosis OFXR-30	1402599	PRJNA221517	221517	Terrabacteria group	Actinobacteria	4.40702	65.6	-	JLBL01	4	4293	4109	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02364092	GCA_000668155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/155/GCA_000668155.1_Myco_tube_OFXR-30_V1	-	OFXR-30
Escherichia coli UMEA 3097-1	1281182	PRJNA186284	186284	Proteobacteria	Gammaproteobacteria	5.23075	50.5	-	AWBC01	8	5327	5002	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885894	GCA_000460135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/135/GCA_000460135.1_Esch_coli_UMEA_3097-1_V1	-	UMEA 3097-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.02678	39.6	-	CNXQ02	130	2202	1995	3/23/15	3/11/17	Contig	SC	SAMEA1032481	GCA_001131085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/085/GCA_001131085.2_7001_3_9	-	R34-3143
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.9096	66	-	LLUH01	201	6689	6376	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128724	GCA_001454645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/645/GCA_001454645.1_WH-SGI-V-071851	26604259	WH-SGI-V-07281
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.05719	39	-	JWTZ03	141	3959	3805	12/29/14	3/18/17	Contig	JCVI	SAMN03084859	GCA_000811865.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/865/GCA_000811865.3_ASM81186v3	-	UH367_548
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	3.54455	51.2	-	CXNW01	118	3425	3371	7/16/15	9/30/15	Contig	SC	SAMEA2055843	GCA_001256595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/595/GCA_001256595.1_9870_7_3	-	144367
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.19664	28.5	-	FUXT01	45	3915	3775	3/4/17	3/11/17	Scaffold	SC	SAMEA3375153	GCA_900167595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/595/GCA_900167595.1_16780_8_87	-	VRECD0186
Klebsiella pneumoniae subsp. ozaenae NBRC 105683	1218098	PRJDB271	172094	Proteobacteria	Gammaproteobacteria	5.17565	57.2	-	BCZL01	154	5266	4837	3/11/16	2/21/17	Contig	National Institute of Technology and Evaluation	SAMD00046900	GCA_001598715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/598/715/GCA_001598715.1_ASM159871v1	-	NBRC 105683
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.29796	64.2	-	FSKX01	74	5355	5146	12/14/16	3/21/17	Scaffold	SC	SAMEA2275788	GCA_900137605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/605/GCA_900137605.1_12163_2_36	-	1062
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.30664	64.1	-	FVPL01	30	5366	5210	3/10/17	3/18/17	Scaffold	SC	SAMEA2275794	GCA_900137615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/615/GCA_900137615.1_12163_2_41	-	1068
Klebsiella pneumoniae	573	PRJNA310837	310837	Proteobacteria	Gammaproteobacteria	5.9273	56.5	-	LSBZ01	435	6143	5534	5/8/16	2/21/17	Contig	LAU	SAMN04456062	GCA_001640185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/185/GCA_001640185.1_ASM164018v1	-	EA_Carb
Clostridioides difficile	1496	PRJEB4347	237869	Terrabacteria group	Firmicutes	4.02226	28.9	-	FUXQ01	62	3711	3557	3/4/17	3/10/17	Scaffold	SC	SAMEA2239370	GCA_900167615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/615/GCA_900167615.1_11670_1_20	-	CD19
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	0.630197	51.5	-	CXNZ01	9	609	601	7/16/15	9/30/15	Contig	SC	SAMEA2058004	GCA_001256795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/795/GCA_001256795.1_9870_7_5	-	144371
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.87402	38.9	-	JWTY03	126	3729	3567	12/29/14	3/18/17	Contig	JCVI	SAMN03084860	GCA_000811885.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/885/GCA_000811885.3_ASM81188v3	-	UH367_558
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.83506	66.1	-	LLUJ01	111	6633	6418	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128726	GCA_001454665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/665/GCA_001454665.1_WH-SGI-V-07673	26604259	WH-SGI-V-07283
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.17754	39.7	-	CMJA01	62	2418	2160	3/23/15	3/10/17	Contig	SC	SAMEA1029400	GCA_001131125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/125/GCA_001131125.1_7038_7_6	-	SMRU3006
Escherichia coli UMEA 3108-1	1281183	PRJNA186285	186285	Proteobacteria	Gammaproteobacteria	5.07871	50.5	-	AWBD01	38	5169	4856	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885895	GCA_000460155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/155/GCA_000460155.1_Esch_coli_UMEA_3108-1_V1	-	UMEA 3108-1
Mycobacterium tuberculosis OFXR-31	1402600	PRJNA221518	221518	Terrabacteria group	Actinobacteria	4.41885	65.5	-	JLBK01	6	4299	4099	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02364093	GCA_000668175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/175/GCA_000668175.1_Myco_tube_OFXR-31_V1	-	OFXR-31
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	2.96766	37.9	-	FUJY01	19	3048	2949	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72836668	GCA_900162485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/485/GCA_900162485.1_32D10	-	n/a
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.80351	30.1	-	MEIB01	59	1909	1724	11/7/16	3/20/17	Scaffold	University of California at Davis	SAMN03359139	GCA_001870565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/565/GCA_001870565.1_ASM187056v1	-	BCW_3781
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000753	1182178	PRJNA162813	162813	Proteobacteria	Gammaproteobacteria	4.76483	52.2	-	JRCM01	57	4827	4609	9/5/14	2/26/17	Contig	FDA	SAMN00991048	GCA_000749085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/085/GCA_000749085.1_CFSAN000753_01.0	-	CFSAN000753
Staphylococcus aureus M0968	1388728	PRJNA216901	216901	Terrabacteria group	Firmicutes	2.86621	32.8	-	JCSZ01	56	3028	2837	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325852	GCA_000545905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/905/GCA_000545905.1_Stap_aure_M0968_V1	-	M0968
Staphylococcus aureus M0969	1388729	PRJNA216902	216902	Terrabacteria group	Firmicutes	2.84497	32.8	-	JCTA01	34	2979	2817	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325853	GCA_000545925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/925/GCA_000545925.1_Stap_aure_M0969_V1	-	M0969
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000754	1182179	PRJNA162815	162815	Proteobacteria	Gammaproteobacteria	4.79138	52	-	JRCL01	129	4915	4620	9/5/14	2/27/17	Contig	FDA	SAMN00991049	GCA_000749105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/105/GCA_000749105.1_CFSAN000754_01.0	-	CFSAN000754
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.74867	30.4	-	MEIC01	30	1876	1649	11/7/16	4/17/17	Scaffold	University of California at Davis	SAMN03359141	GCA_001870605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/605/GCA_001870605.1_ASM187060v1	-	BCW_3784
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.02614	37.8	-	FUKF01	18	3092	3001	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72835918	GCA_900162495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/495/GCA_900162495.1_32C06	-	n/a
Mycobacterium tuberculosis OFXR-32	1402601	PRJNA221519	221519	Terrabacteria group	Actinobacteria	4.42624	65.5	-	JLBJ01	5	4298	4094	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02364094	GCA_000668195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/195/GCA_000668195.1_Myco_tube_OFXR-32_V1	-	OFXR-32
Escherichia coli UMEA 3113-1	1281184	PRJNA186286	186286	Proteobacteria	Gammaproteobacteria	5.13255	50.5	-	AWBE01	13	5219	4881	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885896	GCA_000460175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/175/GCA_000460175.1_Esch_coli_UMEA_3113-1_V1	-	UMEA 3113-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0053	39.7	-	COES02	109	2180	1986	3/23/15	3/11/17	Contig	SC	SAMEA1463227	GCA_001131205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/205/GCA_001131205.2_7622_5_58	-	MD5071
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.46146	66.6	-	LLUM01	61	6129	5843	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128729	GCA_001454675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/675/GCA_001454675.1_WH-SGI-V-07287	26604259	WH-SGI-V-07287
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.87575	38.9	-	JWTX03	106	3748	3617	12/29/14	3/18/17	Contig	JCVI	SAMN03084861	GCA_000811905.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/905/GCA_000811905.3_ASM81190v3	-	UH195_560
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	2.54711	51.5	-	CXNX01	62	2456	2409	7/17/15	9/30/15	Contig	SC	SAMEA2055849	GCA_001258875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/875/GCA_001258875.1_9870_7_21	-	144748
Clostridioides difficile	1496	PRJEB8767	295828	Terrabacteria group	Firmicutes	4.28674	28.7	-	FUXN01	54	4139	3951	3/4/17	3/11/17	Scaffold	SC	SAMEA3375040	GCA_900167625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/625/GCA_900167625.1_16852_2_68	-	VRECD0076
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA313926	313926	Proteobacteria	Gammaproteobacteria	6.19658	57.3	-	LXTP01	47	6240	5969	5/17/16	2/21/17	Contig	Federal University of Uberlandia	SAMN04956567	GCA_001645745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/745/GCA_001645745.1_ASM164574v1	-	KPC45
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.90088	64.2	-	FVPJ01	8	4933	4807	3/10/17	3/18/17	Scaffold	SC	SAMEA2275792	GCA_900137625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/625/GCA_900137625.1_12163_2_39	-	1066
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.27853	64.1	-	FVPK01	35	5257	5105	3/10/17	3/18/17	Scaffold	SC	SAMEA2275757	GCA_900137645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/645/GCA_900137645.1_12163_2_4	-	1031
Klebsiella pneumoniae	573	PRJNA323956	323956	Proteobacteria	Gammaproteobacteria	5.55575	57.1	-	LZCT01	129	5610	5361	6/13/16	2/21/17	Contig	Zhejiang Sci-Tech University	SAMN05192730	GCA_001661895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/661/895/GCA_001661895.1_ASM166189v1	-	AS
Mycoplasma mycoides subsp. mycoides SC str. PG1	272632	PRJNA10616	10616	Terrabacteria group	Tenericutes	1.2117	24	chromosome:NC_005364.2/BX293980.2	-	1	1053	1017	2/9/04	8/3/16	Complete Genome	"Royal Institute of Technology, Stockholm, Sweden"	SAMEA3138208	GCA_000011445.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/011/445/GCA_000011445.1_ASM1144v1	14762060	PG1
Shigella sonnei	624	PRJEB2975	244981	Proteobacteria	Gammaproteobacteria	3.4896	51.2	-	CXNY01	112	3401	3344	7/16/15	9/30/15	Contig	SC	SAMEA2057233	GCA_001259375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/259/375/GCA_001259375.1_9870_7_4	-	144368
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.0533	39	-	JWTW03	109	3947	3800	12/29/14	3/18/17	Contig	JCVI	SAMN03084862	GCA_000811925.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/925/GCA_000811925.3_ASM81192v3	-	UH367_565
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.75093	66	-	LLVA01	86	6269	6128	11/30/15	3/10/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128743	GCA_001454745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/745/GCA_001454745.1_WH-SGI-V-07311	-	WH-SGI-V-07311
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09569	39.6	-	CNQW02	360	2245	2061	3/23/15	3/5/17	Contig	SC	SAMEA1032601	GCA_001131405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/405/GCA_001131405.2_6999_1_18	-	R34-3201
Escherichia coli UMEA 3117-1	1281185	PRJNA186287	186287	Proteobacteria	Gammaproteobacteria	4.81848	50.6	-	AWBF01	7	4937	4679	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885897	GCA_000460195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/195/GCA_000460195.1_Esch_coli_UMEA_3117-1_V1	-	UMEA 3117-1
Mycobacterium tuberculosis OFXR-33	1402602	PRJNA221520	221520	Terrabacteria group	Actinobacteria	4.44077	65.5	-	JLBI01	6	4310	4128	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02364095	GCA_000668215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/215/GCA_000668215.1_Myco_tube_OFXR-33_V1	-	OFXR-33
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.14592	37.9	-	FUJW01	37	3228	3132	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72837418	GCA_900162505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/505/GCA_900162505.1_33H08	-	n/a
Campylobacter jejuni	197	PRJNA239251	239251	Proteobacteria	delta/epsilon subdivisions	1.62971	30.5	-	MORJ01	16	1708	1606	11/15/16	3/20/17	Scaffold	Centers for Disease Control and Prevention	SAMN04545062	GCA_001879185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/185/GCA_001879185.1_ASM187918v1	-	D7331
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000755	1182186	PRJNA162829	162829	Proteobacteria	Gammaproteobacteria	4.6907	52.2	-	JRCK01	119	4739	4518	9/5/14	2/26/17	Contig	FDA	SAMN00991058	GCA_000749125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/125/GCA_000749125.1_CFSAN000755_01.0	-	CFSAN000755
Staphylococcus aureus M0970	1388730	PRJNA216903	216903	Terrabacteria group	Firmicutes	2.87887	32.8	-	JCTB01	48	3037	2857	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325854	GCA_000545945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/945/GCA_000545945.1_Stap_aure_M0970_V1	-	M0970
Staphylococcus aureus M0971	1388731	PRJNA216904	216904	Terrabacteria group	Firmicutes	2.91857	32.8	-	JCTC01	55	3080	2884	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325855	GCA_000545965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/965/GCA_000545965.1_Stap_aure_M0971_V1	-	M0971
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000951	1182180	PRJNA162817	162817	Proteobacteria	Gammaproteobacteria	4.76602	52.2	-	JRCJ01	90	4835	4598	9/5/14	2/27/17	Contig	FDA	SAMN01942233	GCA_000749145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/145/GCA_000749145.1_CFSAN000951_01.0	-	CFSAN000951
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.63395	30.5	-	MKFE01	40	1685	1553	12/21/16	3/21/17	Scaffold	University of California at Davis	SAMN04532293	GCA_001912945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/945/GCA_001912945.1_ASM191294v1	-	BCW_5159
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	2.8835	37.9	-	FUJU01	13	2906	2817	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72832168	GCA_900162515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/515/GCA_900162515.1_27I07	-	n/a
Mycobacterium tuberculosis str. Erdman = ATCC 35801	652616	PRJNA221521	221521	Terrabacteria group	Actinobacteria	4.42622	65.6	-	JLBG01	2	4288	4114	4/29/14	3/11/17	Scaffold	Broad Institute	SAMN02364096	GCA_000668235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/235/GCA_000668235.1_Myco_tube_Erdman_V1	-	Erdman
Escherichia coli UMEA 3121-1	1281186	PRJNA186288	186288	Proteobacteria	Gammaproteobacteria	5.37134	50.3	-	AWBG01	13	5526	5125	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885898	GCA_000460215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/215/GCA_000460215.1_Esch_coli_UMEA_3121-1_V1	-	UMEA 3121-1
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.15343	39.5	-	CLGX01	69	2382	2161	3/21/15	3/4/17	Contig	SC	SAMEA1026127	GCA_001131485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/485/GCA_001131485.1_6925_4_21	-	SMRU2157
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.91607	65.9	-	LLVG01	157	6752	6466	11/30/15	3/22/17	Contig	"Synthetic Genomics Vaccines, Inc."	SAMN04128749	GCA_001454755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/755/GCA_001454755.1_WH-SGI-V-07318	26604259	WH-SGI-V-07318
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.79555	39	-	JWYU03	88	3631	3507	12/29/14	3/18/17	Contig	JCVI	SAMN03084726	GCA_000811945.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/811/945/GCA_000811945.3_ASM81194v3	-	UH455_6
Shigella sonnei	624	PRJNA361576	361576	Proteobacteria	Gammaproteobacteria	4.5326	51.0982	plasmid p_C:CM007810.1	MTKB01	432	5359	4425	3/29/17	3/29/17	Contig	University of Pecs	SAMN06235000	GCA_002073875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/875/GCA_002073875.1_ASM207387v1	-	4303
Mycoplasma mycoides subsp. mycoides	2103	PRJNA310401	310401	Terrabacteria group	Tenericutes	1.18885	23.9	chromosome:NZ_CP014346.1/CP014346.1	-	1	1134	996	2/22/16	4/4/17	Complete Genome	INRA Univ Bordeaux	SAMN04451932	GCA_001564435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/564/435/GCA_001564435.1_ASM156443v1	27081135	T1/44
Klebsiella pneumoniae	573	PRJNA279672	279672	Proteobacteria	Gammaproteobacteria	5.54526	57.1	-	LTBD01	81	5653	5359	6/17/16	2/21/17	Contig	NHGRI	SAMN03455992	GCA_001665995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/995/GCA_001665995.1_ASM166599v1	27353756	KPNIH38
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.08465	64.1	-	FSLA01	23	5088	4969	12/14/16	3/21/17	Scaffold	SC	SAMEA2275795	GCA_900137655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/655/GCA_900137655.1_12163_2_42	-	1069
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.30433	64.1	-	FSKY01	45	5380	5189	12/14/16	3/21/17	Scaffold	SC	SAMEA2275791	GCA_900137665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/665/GCA_900137665.1_12163_2_38	-	1065
Klebsiella pneumoniae	573	PRJNA279619	279619	Proteobacteria	Gammaproteobacteria	5.45442	57.4	-	LTDV01	64	5557	5346	6/17/16	2/21/17	Contig	NHGRI	SAMN03455939	GCA_001666005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/005/GCA_001666005.1_ASM166600v1	27353756	KPNIH40
Mycoplasma mycoides subsp. mycoides	2103	PRJNA280349	280349	Terrabacteria group	Tenericutes	1.14592	23.9	chromosome:NZ_CP011260.1/CP011260.1	-	1	1107	943	2/9/16	4/4/17	Complete Genome	Chinese National Human Genome Center at Shanghai	SAMN03459584	GCA_001554055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/055/GCA_001554055.1_ASM155405v1	26750304	Ben1
Shigella sonnei	624	PRJNA385907	385907	Proteobacteria	Gammaproteobacteria	4.42922	50.9	-	NGWH01	421	5031	3989	6/6/17	6/6/17	Contig	Christian Medical College	SAMN06920477	GCA_002174705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/705/GCA_002174705.1_ASM217470v1	-	FC1373
Acinetobacter baumannii	470	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	4.05985	38.9	-	BBSU01	87	3935	3765	2/3/15	3/16/17	Contig	National Institute of Technology and Evaluation	SAMD00020336	GCA_000835995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/835/995/GCA_000835995.1_ASM83599v1	-	NBRC 110490
Pseudomonas aeruginosa	287	PRJNA279615	279615	Proteobacteria	Gammaproteobacteria	7.10319	65.8	-	LODN01	135	6893	6618	12/18/15	3/19/17	Contig	NHGRI	SAMN03455934	GCA_001469695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/695/GCA_001469695.1_ASM146969v1	26868386	AATYA
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.14793	39.7	-	CMVV01	86	2316	2021	3/22/15	3/6/17	Contig	SC	SAMEA1022772	GCA_001131625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/625/GCA_001131625.1_5756_6_5	-	301
Escherichia coli UMEA 3122-1	1281187	PRJNA186289	186289	Proteobacteria	Gammaproteobacteria	5.18499	50.6	-	AWBH01	28	5362	4990	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885899	GCA_000460235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/235/GCA_000460235.1_Esch_coli_UMEA_3122-1_V1	-	UMEA 3122-1
Mycobacterium tuberculosis UT0030	1408918	PRJNA223550	223550	Terrabacteria group	Actinobacteria	4.41261	65.6	-	JLPX01	11	4292	4124	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02380995	GCA_000668255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/255/GCA_000668255.1_Myco_tube_UT0030_V1	-	UT0030
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.1851	37.8	-	FUIX01	40	3306	3198	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72817168	GCA_900162525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/525/GCA_900162525.1_17K09	-	n/a
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.68567	30.5	-	MKEY01	41	1765	1624	12/21/16	3/21/17	Scaffold	University of California at Davis	SAMN04532287	GCA_001913005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/005/GCA_001913005.1_ASM191300v1	-	BCW_5152
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000952	1182181	PRJNA162819	162819	Proteobacteria	Gammaproteobacteria	4.76678	52.2	-	JRCI01	250	4906	4584	9/5/14	2/27/17	Contig	FDA	SAMN01942313	GCA_000749165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/165/GCA_000749165.1_CFSAN000952_01.0	-	CFSAN000952
Staphylococcus aureus M0972	1388732	PRJNA216905	216905	Terrabacteria group	Firmicutes	2.89296	32.8	-	JCTD01	59	3045	2869	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325856	GCA_000545985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/545/985/GCA_000545985.1_Stap_aure_M0972_V1	-	M0972
Staphylococcus aureus M0974	1388734	PRJNA216907	216907	Terrabacteria group	Firmicutes	2.90677	32.9	-	JCTE01	59	3075	2894	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325858	GCA_000546005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/005/GCA_000546005.1_Stap_aure_M0974_V1	-	M0974
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000187	1173475	PRJNA159375	159375	Proteobacteria	Gammaproteobacteria	4.62166	52.3	-	JREF01	66	4658	4452	9/5/14	2/27/17	Contig	FDA	SAMN01942286	GCA_000749195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/195/GCA_000749195.1_CFSAN000187_01.0	-	CFSAN000187
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.81065	30.3	-	MKFC01	88	1889	1698	12/21/16	3/21/17	Scaffold	University of California at Davis	SAMN04532291	GCA_001913065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/065/GCA_001913065.1_ASM191306v1	-	BCW_5157
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.10179	37.9	-	FUJM01	26	3213	3111	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72828418	GCA_900162535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/535/GCA_900162535.1_25F07	-	n/a
Mycobacterium tuberculosis UT0034	1408919	PRJNA223551	223551	Terrabacteria group	Actinobacteria	4.39759	65.6	-	JLPW01	67	4318	4114	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02380996	GCA_000668275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/275/GCA_000668275.1_Myco_tube_UT0034_V1	-	UT0034
Escherichia coli UMEA 3124-1	1281188	PRJNA186290	186290	Proteobacteria	Gammaproteobacteria	4.90097	50.5	-	AWBI01	9	4874	4617	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885900	GCA_000460255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/255/GCA_000460255.1_Esch_coli_UMEA_3124-1_V1	-	UMEA 3124-1
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07177	39.6	-	CKOJ01	47	2259	2010	3/21/15	3/6/17	Contig	SC	SAMEA1024057	GCA_001131665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/665/GCA_001131665.1_6673_8_24	-	SMRU264
Pseudomonas aeruginosa	287	PRJNA305457	305457	Proteobacteria	Gammaproteobacteria	6.79525	66	-	LOJK01	2	6589	6328	12/29/15	3/19/17	Contig	Chinese Academy of Science	SAMN04325380	GCA_001483235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/483/235/GCA_001483235.1_ASM148323v1	-	L6-1
Acinetobacter baumannii	470	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.81275	38.9	-	BBSP01	41	3632	3514	2/3/15	3/16/17	Contig	National Institute of Technology and Evaluation	SAMD00019517	GCA_000836075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/836/075/GCA_000836075.1_ASM83607v1	-	GTC 03325
Shigella sonnei	624	PRJNA385907	385907	Proteobacteria	Gammaproteobacteria	4.46305	50.9	-	NGWI01	431	5049	3928	6/6/17	6/6/17	Contig	Christian Medical College	SAMN06920476	GCA_002174755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/755/GCA_002174755.1_ASM217475v1	-	FC288
Mycoplasma mycoides subsp. mycoides	2103	PRJNA280356	280356	Terrabacteria group	Tenericutes	1.09178	23.9	chromosome:NZ_CP011264.1/CP011264.1	-	1	1058	901	2/9/16	4/10/17	Complete Genome	Chinese National Human Genome Center at Shanghai	SAMN04479836	GCA_001554155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/155/GCA_001554155.1_ASM155415v1	26750304	Ben468
Klebsiella pneumoniae	573	PRJNA303003	303003	Proteobacteria	Gammaproteobacteria	5.67275	57.2	-	LRIM01	128	5836	5566	6/17/16	2/21/17	Contig	NHGRI	SAMN04287036	GCA_001666015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/015/GCA_001666015.1_ASM166601v1	27353756	KPNIH35
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.08535	64.1	-	FSKZ01	19	5093	4976	12/14/16	3/21/17	Scaffold	SC	SAMEA2275793	GCA_900137675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/675/GCA_900137675.1_12163_2_40	-	1067
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.28966	64.2	-	FSLB01	78	5331	5133	12/14/16	3/22/17	Scaffold	SC	SAMEA2275797	GCA_900137685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/685/GCA_900137685.1_12163_2_44	-	1071
Klebsiella pneumoniae	573	PRJNA279671	279671	Proteobacteria	Gammaproteobacteria	5.55633	57.2	-	LRRE01	72	5684	5444	6/17/16	2/21/17	Contig	NHGRI	SAMN03455991	GCA_001667545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/667/545/GCA_001667545.1_ASM166754v1	27353756	KPNIH37
Mycoplasma mycoides subsp. capri	40477	PRJNA285728	285728	Terrabacteria group	Tenericutes	1.08576	23.9	chromosome:NZ_CP012387.1/CP012387.1	-	1	942	845	8/17/15	4/4/17	Complete Genome	International Livestock Research Institute	SAMN03758384	GCA_001267815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/815/GCA_001267815.1_ASM126781v1	-	GM12
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.42838	50.8	-	CXCF01	506	4141	4094	7/16/15	7/16/15	Scaffold	SC	SAMEA954851	GCA_001251775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/251/775/GCA_001251775.1_5236_3_1	-	ShIB2015_440825
Acinetobacter baumannii	470	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	3.93345	39.1	-	JXSV01	53	3814	3651	2/12/15	3/16/17	Contig	Miami University	SAMN03276491	GCA_000836625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/836/625/GCA_000836625.1_ASM83662v1	25814610	A155
Pseudomonas aeruginosa 0C2E	1421531	PRJNA301716	301716	Proteobacteria	Gammaproteobacteria	6.93314	66.1	-	LNBU01	102	6792	6539	1/6/16	3/19/17	Contig	University Laval	SAMEA2342059	GCA_001500235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/500/235/GCA_001500235.1_ASM150023v1	26714629	0C2E
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00099	39.7	-	COAL02	109	2157	1955	3/22/15	3/5/17	Contig	SC	SAMEA1463167	GCA_001131725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/725/GCA_001131725.2_7622_2_11	-	BR1029
Escherichia coli UMEA 3139-1	1281189	PRJNA186291	186291	Proteobacteria	Gammaproteobacteria	5.2932	50.7	-	AWBJ01	21	5466	5023	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885901	GCA_000460275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/275/GCA_000460275.1_Esch_coli_UMEA_3139-1_V1	-	UMEA 3139-1
Mycobacterium tuberculosis UT0036	1408920	PRJNA223552	223552	Terrabacteria group	Actinobacteria	4.40853	65.5	-	JLPV01	35	4297	4117	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02380997	GCA_000668295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/295/GCA_000668295.1_Myco_tube_UT0036_V1	-	UT0036
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	2.97234	37.8	-	FUJF01	20	3020	2942	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72820168	GCA_900162545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/545/GCA_900162545.1_18G03	-	n/a
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.8178	30.3	-	MKFB01	85	1897	1708	12/21/16	3/21/17	Scaffold	University of California at Davis	SAMN04532290	GCA_001913075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/075/GCA_001913075.1_ASM191307v1	-	BCW_5156
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000188	1173426	PRJNA159277	159277	Proteobacteria	Gammaproteobacteria	4.7847	52.2	-	JREE01	81	4899	4659	9/5/14	2/26/17	Contig	FDA	SAMN01942293	GCA_000749215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/215/GCA_000749215.1_CFSAN000188_01.0	-	CFSAN000188
Staphylococcus aureus M0975	1388735	PRJNA216908	216908	Terrabacteria group	Firmicutes	2.90426	32.8	-	JCTF01	57	3053	2901	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02325859	GCA_000546025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/025/GCA_000546025.1_Stap_aure_M0975_V1	-	M0975
Staphylococcus aureus M0979	1392008	PRJNA217092	217092	Terrabacteria group	Firmicutes	2.88224	32.9	-	JCTG01	15	3012	2850	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334616	GCA_000546045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/045/GCA_000546045.1_Stap_aure_M0979_V1	-	M0979
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000190	1173428	PRJNA159281	159281	Proteobacteria	Gammaproteobacteria	4.76694	52.1	-	JRED01	252	4883	4615	9/5/14	2/26/17	Contig	FDA	SAMN00860584	GCA_000749235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/235/GCA_000749235.1_CFSAN000190_01.0	-	CFSAN000190
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.61873	30.5	-	NFMI01	11	1685	1578	6/8/17	6/10/17	Scaffold	Swansea University	SAMN06888365	GCA_002177315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/315/GCA_002177315.1_ASM217731v1	28493321	isolate_W9
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.13857	37.8	-	FUIO01	23	3240	3136	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72808918	GCA_900162555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/555/GCA_900162555.1_15G01	-	n/a
Mycobacterium tuberculosis UT0037	1408921	PRJNA223553	223553	Terrabacteria group	Actinobacteria	4.4347	65.5	-	JLPU01	6	4307	4117	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02380998	GCA_000668315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/315/GCA_000668315.1_Myco_tube_UT0037_V1	-	UT0037
Escherichia coli UMEA 3140-1	1281190	PRJNA186292	186292	Proteobacteria	Gammaproteobacteria	5.05948	50.6	-	AWBK01	10	5159	4820	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885902	GCA_000460295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/295/GCA_000460295.1_Esch_coli_UMEA_3140-1_V1	-	UMEA 3140-1
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.16872	39.5	-	CPMQ01	79	2391	2165	3/22/15	3/10/17	Contig	SC	SAMEA1020630	GCA_001131885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/885/GCA_001131885.1_6569_4_10	-	PT3104
Pseudomonas aeruginosa	287	PRJNA301716	301716	Proteobacteria	Gammaproteobacteria	6.33943	66.5	-	LNDM01	65	6073	5866	1/6/16	3/19/17	Contig	University Laval	SAMN04256133	GCA_001500245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/500/245/GCA_001500245.1_ASM150024v1	26714629	0C4A
Acinetobacter baumannii	470	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	4.06108	38.9	-	BBTC01	90	3934	3765	2/10/15	3/16/17	Contig	National Institute of Technology and Evaluation	SAMD00020337	GCA_000876055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/055/GCA_000876055.1_ASM87605v1	-	NBRC 110491
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.57363	50.2	-	CXDQ01	551	4585	4530	7/16/15	7/16/15	Scaffold	SC	SAMEA954678	GCA_001252575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/252/575/GCA_001252575.1_5236_7_5	-	Sh1274_441042
Candidatus Portiera aleyrodidarum	91844	PRJEB4466	277154	Proteobacteria	Gammaproteobacteria	0.290195	23.9	chromosome I:LN649255.1	-	1	318	278	3/4/15	3/4/15	Complete Genome	ICBIBE	SAMEA2820670	GCA_000953295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/295/GCA_000953295.1_AD-CAI.1	-	AD-CAI
Klebsiella pneumoniae	573	PRJNA325878	325878	Proteobacteria	Gammaproteobacteria	5.41648	57.3	-	MAMU01	94	5446	5158	7/3/16	2/21/17	Contig	DTU	SAMN05300423	GCA_001678695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/695/GCA_001678695.1_ASM167869v1	-	Kp08
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.00247	64.1	-	FVPO01	16	5033	4853	3/10/17	3/18/17	Scaffold	SC	SAMEA2275798	GCA_900137695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/695/GCA_900137695.1_12163_2_45	-	1072
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23007	64.2	-	FSLC01	21	5283	5156	12/14/16	3/21/17	Scaffold	SC	SAMEA2275800	GCA_900137715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/715/GCA_900137715.1_12163_2_47	-	1074
Klebsiella pneumoniae	573	PRJNA325878	325878	Proteobacteria	Gammaproteobacteria	5.38961	57.124	plasmid pKP33:NZ_CM004510.1/CM004510.1	MAKN01	50	5410	5173	7/26/16	2/21/17	Contig	DTU	SAMN05293825	GCA_001693715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/715/GCA_001693715.1_ASM169371v1	-	Kp33
Mycoplasma mycoides subsp. capri str. GM12	436113	PRJNA19245	19245	Terrabacteria group	Tenericutes	1.0892	23.9	chromosome:NZ_CP001621.1/CP001621.1	-	1	948	850	8/21/09	3/29/17	Complete Genome	J. Craig Venter Institute	SAMN02603437	GCA_000023165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/165/GCA_000023165.1_ASM2316v1	-	GM12
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.56456	50.8	-	CXDD01	624	4280	4233	7/16/15	7/16/15	Scaffold	SC	SAMEA954597	GCA_001253215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/253/215/GCA_001253215.1_5236_5_7	-	Sh54185_440883
Acinetobacter baumannii	470	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	4.0774	39	-	BBTD01	173	3964	3760	2/10/15	3/16/17	Contig	National Institute of Technology and Evaluation	SAMD00020338	GCA_000876075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/075/GCA_000876075.1_ASM87607v1	-	NBRC 110492
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.42393	66.3	-	LRSH01	48	6162	5812	2/2/16	3/19/17	Contig	University of Michigan	SAMN04436520	GCA_001545175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/175/GCA_001545175.1_ASM154517v1	27103710	AU13626
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.05594	39.7	-	CLVE01	80	2279	2038	3/21/15	3/10/17	Contig	SC	SAMEA1026031	GCA_001131905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/905/GCA_001131905.1_6983_3_59	-	SMRU2267
Escherichia coli UMEA 3144-1	1281191	PRJNA186293	186293	Proteobacteria	Gammaproteobacteria	5.07158	50.5	-	AWBL01	3	5081	4789	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885903	GCA_000460315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/315/GCA_000460315.1_Esch_coli_UMEA_3144-1_V1	-	UMEA 3144-1
Mycobacterium tuberculosis UT0038	1408922	PRJNA223554	223554	Terrabacteria group	Actinobacteria	4.40977	65.5	-	JLPT01	8	4276	4109	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02380999	GCA_000668335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/335/GCA_000668335.1_Myco_tube_UT0038_V1	-	UT0038
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	2.95424	37.8	-	FUIW01	17	2999	2912	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72811168	GCA_900162565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/565/GCA_900162565.1_16A01	-	n/a
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.58694	29.6	-	NFMK01	18	1649	1540	6/8/17	6/10/17	Scaffold	Swansea University	SAMN06888363	GCA_002177345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/345/GCA_002177345.1_ASM217734v1	28493321	isolate_W7
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000192	1173454	PRJNA159333	159333	Proteobacteria	Gammaproteobacteria	4.57467	52.3	-	JREC01	81	4602	4393	9/5/14	2/26/17	Contig	FDA	SAMN00860589	GCA_000749255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/255/GCA_000749255.1_CFSAN000192_01.0	-	CFSAN000192
Staphylococcus aureus M0982	1392011	PRJNA217095	217095	Terrabacteria group	Firmicutes	2.8428	32.7	-	JCTH01	59	2993	2868	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334619	GCA_000546065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/065/GCA_000546065.1_Stap_aure_M0982_V1	-	M0982
Staphylococcus aureus M0983	1392012	PRJNA217096	217096	Terrabacteria group	Firmicutes	2.85975	32.9	-	JCTI01	18	2995	2824	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334620	GCA_000546085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/085/GCA_000546085.1_Stap_aure_M0983_V1	-	M0983
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000193	1173429	PRJNA159283	159283	Proteobacteria	Gammaproteobacteria	4.70597	52.2	-	JREB01	96	4787	4569	9/5/14	2/27/17	Contig	FDA	SAMN01942310	GCA_000749275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/275/GCA_000749275.1_CFSAN000193_01.0	-	CFSAN000193
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.71745	30.4	-	NFND01	8	1796	1645	6/8/17	6/10/17	Scaffold	Swansea University	SAMN06888344	GCA_002177655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/655/GCA_002177655.1_ASM217765v1	28493321	isolate_W30
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.13939	37.8	-	FUJV01	28	3236	3135	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72839668	GCA_900162575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/575/GCA_900162575.1_06B04	-	n/a
Mycobacterium tuberculosis UT0040	1408923	PRJNA223555	223555	Terrabacteria group	Actinobacteria	4.43751	65.5	-	JLPS01	5	4302	4096	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381000	GCA_000668355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/355/GCA_000668355.1_Myco_tube_UT0040_V1	-	UT0040
Escherichia coli UMEA 3150-1	1281193	PRJNA186295	186295	Proteobacteria	Gammaproteobacteria	4.95976	50.7	-	AWBN01	11	5150	4829	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885905	GCA_000460335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/335/GCA_000460335.1_Esch_coli_UMEA_3150-1_V1	-	UMEA 3150-1
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.08078	39.7	-	CMBL01	63	2310	2085	3/21/15	3/10/17	Contig	SC	SAMEA1029317	GCA_001132045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/045/GCA_001132045.1_7004_7_50	-	SMRU2882
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.11855	66.2	-	LRSI01	103	5953	5552	2/2/16	3/19/17	Contig	University of Michigan	SAMN04436521	GCA_001545185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/185/GCA_001545185.1_ASM154518v1	27103710	AU22632
Acinetobacter baumannii	470	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.81415	38.9	-	BBTE01	45	3637	3511	2/10/15	3/16/17	Contig	National Institute of Technology and Evaluation	SAMD00020340	GCA_000876095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/876/095/GCA_000876095.1_ASM87609v1	-	NBRC 110494
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.58158	50.4	-	CXCB01	513	4410	4351	7/17/15	7/17/15	Scaffold	SC	SAMEA954854	GCA_001255415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/255/415/GCA_001255415.1_5236_1_5	-	ShIB713_440731
Clostridioides difficile R20291	645463	PRJNA38039	38039	Terrabacteria group	Firmicutes	4.19134	28.8	chromosome:FN545816.1	-	1	3570	3508	10/1/09	2/27/15	Chromosome	Wellcome Trust Sanger Institute	SAMEA3138243	GCA_000027105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/027/105/GCA_000027105.1_ASM2710v1	-	R20291
Klebsiella pneumoniae	573	PRJNA327575	327575	Proteobacteria	Gammaproteobacteria	5.73556	57.2	-	MBQW01	130	5941	5594	7/28/16	2/21/17	Contig	NIH	SAMN05346258	GCA_001695655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/655/GCA_001695655.1_ASM169565v1	25232178	KPNIH34
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.8634	64.2	-	FVPN01	4	4885	4761	3/10/17	3/18/17	Scaffold	SC	SAMEA2275758	GCA_900137725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/725/GCA_900137725.1_12163_2_5	-	1032
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.36037	64.1	-	FSLF01	27	5439	5258	12/14/16	3/22/17	Scaffold	SC	SAMEA2275803	GCA_900137735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/735/GCA_900137735.1_12163_2_50	-	1077
Klebsiella pneumoniae	573	PRJNA261555	261555	Proteobacteria	Gammaproteobacteria	5.40278	57.3	-	JTEB01	157	5412	5158	8/5/16	2/21/17	Contig	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN03175161	GCA_001698945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/698/945/GCA_001698945.1_ASM169894v1	-	XH212
Clostridioides difficile BI9	699032	PRJNA42473	42473	Terrabacteria group	Firmicutes	4.17823	28.7	chromosome:FN668944.1	-	1	-	-	3/24/10	2/27/15	Chromosome	Wellcome Trust Sanger Institute	SAMEA3138413	GCA_000270485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/270/485/GCA_000270485.1_ASM27048v1	-	BI9
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.6479	50	-	CXEP01	672	4750	4699	7/16/15	7/16/15	Scaffold	SC	SAMEA954811	GCA_001256535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/256/535/GCA_001256535.1_5236_8_4	-	Sh998911_441092
Acinetobacter baumannii	470	PRJDB1754	246560	Proteobacteria	Gammaproteobacteria	3.92602	39.1	-	BBTN01	53	3771	3655	2/17/15	3/16/17	Contig	National Institute of Technology and Evaluation	SAMD00019507	GCA_000931755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/931/755/GCA_000931755.1_ASM93175v1	-	NBRC 109757
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.15056	66.2	-	LRSJ01	61	5954	5580	2/2/16	3/19/17	Contig	University of Michigan	SAMN04436522	GCA_001545195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/195/GCA_001545195.1_ASM154519v1	27103710	AU24787
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1106	39.6	-	CKVU01	77	2335	2108	3/21/15	3/10/17	Contig	SC	SAMEA1026074	GCA_001132105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/105/GCA_001132105.1_6823_4_7	-	SMRU1927
Escherichia coli UMEA 3151-1	1281194	PRJNA186296	186296	Proteobacteria	Gammaproteobacteria	4.78729	50.8	-	AWBO01	8	4930	4496	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885906	GCA_000460355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/355/GCA_000460355.1_Esch_coli_UMEA_3151-1_V1	-	UMEA 3151-1
Mycobacterium tuberculosis UT0041	1408924	PRJNA223556	223556	Terrabacteria group	Actinobacteria	4.40541	65.5	-	JLPR01	4	4286	4114	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381001	GCA_000668375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/375/GCA_000668375.1_Myco_tube_UT0041_V1	-	UT0041
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.05682	37.8	-	FUII01	22	3143	3048	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72803668	GCA_900162585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/585/GCA_900162585.1_08A06	-	n/a
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.53958	29.6	-	NFNE01	12	1592	1489	6/8/17	6/10/17	Scaffold	Swansea University	SAMN06888343	GCA_002177675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/675/GCA_002177675.1_ASM217767v1	28493321	isolate_W3
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000963	1182193	PRJNA162843	162843	Proteobacteria	Gammaproteobacteria	4.76274	52.2	-	JRBZ01	113	4823	4594	9/5/14	2/27/17	Contig	FDA	SAMN01942246	GCA_000749295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/295/GCA_000749295.1_CFSAN000963_01.0	-	CFSAN000963
Staphylococcus aureus M0984	1392013	PRJNA217097	217097	Terrabacteria group	Firmicutes	2.8477	32.8	-	JCTJ01	38	3001	2841	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334621	GCA_000546105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/105/GCA_000546105.1_Stap_aure_M0984_V1	-	M0984
Staphylococcus aureus M0985	1392014	PRJNA217098	217098	Terrabacteria group	Firmicutes	2.86164	32.9	-	JCTK01	50	3003	2819	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334622	GCA_000546125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/125/GCA_000546125.1_Stap_aure_M0985_V1	-	M0985
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000964	1183387	PRJNA163173	163173	Proteobacteria	Gammaproteobacteria	4.76456	52.2	-	JRBY01	173	4851	4591	9/5/14	2/27/17	Contig	FDA	SAMN01942265	GCA_000749315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/315/GCA_000749315.1_CFSAN000964_01.0	-	CFSAN000964
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.62571	30.6	-	NFNK01	12	1693	1584	6/8/17	6/10/17	Scaffold	Swansea University	SAMN06888337	GCA_002177775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/775/GCA_002177775.1_ASM217777v1	28493321	isolate_W22
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.10148	37.9	-	FUIQ01	26	3204	3112	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72810418	GCA_900162595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/595/GCA_900162595.1_15I05	-	n/a
Mycobacterium tuberculosis UT0044	1408925	PRJNA223557	223557	Terrabacteria group	Actinobacteria	4.47266	65.5	-	JLPQ01	37	4361	4164	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381002	GCA_000668395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/395/GCA_000668395.1_Myco_tube_UT0044_V1	-	UT0044
Escherichia coli UMEA 3152-1	1281195	PRJNA186297	186297	Proteobacteria	Gammaproteobacteria	4.76401	50.7	-	AWBP01	19	4959	4635	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885907	GCA_000460375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/375/GCA_000460375.1_Esch_coli_UMEA_3152-1_V1	-	UMEA 3152-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.18086	39.6	-	COFN02	332	2410	2159	3/22/15	3/11/17	Contig	SC	SAMEA1462998	GCA_001132145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/145/GCA_001132145.2_7622_5_76	-	ND6019
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.48767	66.3	-	LRSF01	80	6235	5866	2/2/16	3/19/17	Contig	University of Michigan	SAMN04436518	GCA_001545205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/205/GCA_001545205.1_ASM154520v1	27103710	AU1215
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.99782	39	-	JZCN02	174	3885	3732	3/3/15	3/22/17	Contig	JCVI	SAMN03277099	GCA_000939395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/395/GCA_000939395.2_ASM93939v2	-	ORAB03
Shigella sonnei	624	PRJEB2128	203936	Proteobacteria	Gammaproteobacteria	4.3962	50.5	-	CXCJ01	558	4488	4441	7/17/15	7/17/15	Scaffold	SC	SAMEA954817	GCA_001258775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/258/775/GCA_001258775.1_5236_2_5	-	ShIB1995_440757
Clostridioides difficile QCD-32g58	367459	PRJNA16328	16328	Terrabacteria group	Firmicutes	4.10969	28.5	chromosome:CM000287.4	AAML04	1	-	-	1/23/06	3/17/10	Chromosome	Washington University (WashU)	SAMN00627065	GCA_000152665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/665/GCA_000152665.1_ASM15266v1	-	QCD-32g58
Klebsiella pneumoniae	573	PRJNA261555	261555	Proteobacteria	Gammaproteobacteria	5.1836	57.6	-	JTEA01	101	5169	4952	8/5/16	2/21/17	Contig	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN03174891	GCA_001699015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/015/GCA_001699015.1_ASM169901v1	-	XH211
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18081	64	-	FVPP01	25	5199	5075	3/10/17	3/18/17	Scaffold	SC	SAMEA2275804	GCA_900137745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/745/GCA_900137745.1_12163_2_51	-	1078
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.36882	64.3	-	FSLE01	283	5325	5169	12/14/16	3/21/17	Scaffold	SC	SAMEA2275802	GCA_900137755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/755/GCA_900137755.1_12163_2_49	-	1076
Klebsiella pneumoniae	573	PRJNA261555	261555	Proteobacteria	Gammaproteobacteria	5.38339	57.3	-	JTGO01	121	5397	5148	8/5/16	2/21/17	Contig	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN03217648	GCA_001699025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/025/GCA_001699025.1_ASM169902v1	-	XH213
Clostridioides difficile	1496	PRJEB6601	253555	Terrabacteria group	Firmicutes	4.14608	28.4	-	-	115	4033	3907	-	-	Scaffold	PASTEUR	SAMEA2624974	GCA_000935985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/985/GCA_000935985.1_7032985	-	-
Shigella sonnei	624	PRJEB9113	285188	Proteobacteria	Gammaproteobacteria	4.71382	50.1	-	CWUY01	670	4905	4846	7/16/15	7/16/15	Scaffold	SC	SAMEA3345021	GCA_001260435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/260/435/GCA_001260435.1_H14152025601	-	25601ss_1
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.99539	39	-	JZCO02	173	3882	3729	3/3/15	3/22/17	Contig	JCVI	SAMN03277097	GCA_000939405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/405/GCA_000939405.2_ASM93940v2	-	ORAB02
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.4308	66.3	-	LRSG01	60	6177	5819	2/2/16	3/19/17	Contig	University of Michigan	SAMN04436519	GCA_001545255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/255/GCA_001545255.1_ASM154525v1	27103710	AU7511
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05625	39.6	-	CNXO02	286	2162	1986	3/23/15	3/5/17	Contig	SC	SAMEA1032405	GCA_001132165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/165/GCA_001132165.2_7001_3_22	-	R34-3159
Escherichia coli UMEA 3155-1	1281196	PRJNA186298	186298	Proteobacteria	Gammaproteobacteria	4.91457	50.7	-	AWBQ01	10	5001	4717	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885908	GCA_000460395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/395/GCA_000460395.1_Esch_coli_UMEA_3155-1_V1	-	UMEA 3155-1
Mycobacterium tuberculosis UT0045	1408926	PRJNA223558	223558	Terrabacteria group	Actinobacteria	4.37329	65.5	-	JLPP01	6	4261	4095	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381003	GCA_000668415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/415/GCA_000668415.1_Myco_tube_UT0045_V1	-	UT0045
Listeria monocytogenes	1639	PRJEB19211	374005	Terrabacteria group	Firmicutes	3.13948	37.8	-	FUKD01	28	3237	3137	2/10/17	3/2/17	Contig	University of Surrey	SAMEA72840418	GCA_900162605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/605/GCA_900162605.1_21B06	-	n/a
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.62759	30.6	-	NFOK01	13	1718	1568	6/8/17	6/10/17	Scaffold	Swansea University	SAMN06888311	GCA_002178135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/135/GCA_002178135.1_ASM217813v1	28493321	isolate_H7
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000965	1183388	PRJNA163175	163175	Proteobacteria	Gammaproteobacteria	4.75951	52.2	-	JRBX01	314	4881	4574	9/5/14	2/26/17	Contig	FDA	SAMN01942264	GCA_000749335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/335/GCA_000749335.1_CFSAN000965_01.0	-	CFSAN000965
Staphylococcus aureus M0987	1392015	PRJNA217099	217099	Terrabacteria group	Firmicutes	2.8606	32.8	-	JCTL01	67	3011	2837	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334623	GCA_000546145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/145/GCA_000546145.1_Stap_aure_M0987_V1	-	M0987
Staphylococcus aureus M0988	1392016	PRJNA217100	217100	Terrabacteria group	Firmicutes	2.86163	32.9	-	JCTM01	18	2995	2826	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334624	GCA_000546165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/165/GCA_000546165.1_Stap_aure_M0988_V1	-	M0988
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000966	1183389	PRJNA163177	163177	Proteobacteria	Gammaproteobacteria	4.75946	52.2	-	JRBW01	249	4826	4581	9/5/14	2/26/17	Contig	FDA	SAMN01942258	GCA_000749355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/355/GCA_000749355.1_CFSAN000966_01.0	-	CFSAN000966
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.65056	30.4	-	NFPX01	20	1736	1634	6/8/17	6/10/17	Scaffold	Swansea University	SAMN06888272	GCA_002178665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/665/GCA_002178665.1_ASM217866v1	28493321	isolate_C16
Listeria monocytogenes	1639	PRJEB20033	379569	Terrabacteria group	Firmicutes	3.10295	38.2	-	FWDT01	892	3117	2924	3/21/17	3/24/17	Contig	UNIMI	SAMEA103917907	GCA_900169615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/615/GCA_900169615.1_5479	-	-
Mycobacterium tuberculosis UT0048	1408928	PRJNA223560	223560	Terrabacteria group	Actinobacteria	4.34342	65.5	-	JLPN01	133	4342	4036	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381005	GCA_000668435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/435/GCA_000668435.1_Myco_tube_UT0048_V1	-	UT0048
Escherichia coli UMEA 3159-1	1281197	PRJNA186299	186299	Proteobacteria	Gammaproteobacteria	5.22026	50.4	-	AWBR01	18	5351	5019	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885909	GCA_000460415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/415/GCA_000460415.1_Esch_coli_UMEA_3159-1_V1	-	UMEA 3159-1
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08597	39.6	-	CLLV01	61	2267	2039	3/21/15	3/10/17	Contig	SC	SAMEA1029013	GCA_001132245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/245/GCA_001132245.1_6938_6_2	-	SMRU2666
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.44103	66.4	-	LRYH01	87	6169	5873	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436465	GCA_001554305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/305/GCA_001554305.1_ASM155430v1	27103710	AU11866
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	4.00122	39	-	JZCM02	177	3888	3736	3/3/15	3/22/17	Contig	JCVI	SAMN03277092	GCA_000939425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/425/GCA_000939425.2_ASM93942v2	-	ORAB08
Clostridioides difficile	1496	PRJEB6602	253556	Terrabacteria group	Firmicutes	4.14268	28.4	-	-	140	4013	3939	-	-	Scaffold	PASTEUR	SAMEA2624975	GCA_000939295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/295/GCA_000939295.1_7032994	-	7032994
Klebsiella pneumoniae	573	PRJNA261555	261555	Proteobacteria	Gammaproteobacteria	5.35244	57.4	-	JTJA01	138	5346	5108	8/5/16	2/21/17	Contig	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN03217649	GCA_001699035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/035/GCA_001699035.1_ASM169903v1	-	XH214
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.30943	64.1	-	FSLD01	48	5393	5177	12/14/16	3/21/17	Scaffold	SC	SAMEA2275801	GCA_900137765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/765/GCA_900137765.1_12163_2_48	-	1075
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.34935	64	-	FSLK01	41	5435	5222	12/14/16	3/21/17	Scaffold	SC	SAMEA2275809	GCA_900137785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/785/GCA_900137785.1_12163_2_55	-	1083
Klebsiella pneumoniae	573	PRJNA261555	261555	Proteobacteria	Gammaproteobacteria	5.12891	57.6	-	JUBD01	96	5110	4904	8/5/16	2/21/17	Contig	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN03223382	GCA_001699045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/045/GCA_001699045.1_ASM169904v1	-	XH215
Clostridioides difficile	1496	PRJEB6600	253554	Terrabacteria group	Firmicutes	4.4121	29.9	-	-	807	4407	4024	-	-	Scaffold	PASTEUR	SAMEA2624973	GCA_000940315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/315/GCA_000940315.1_7032989	-	7032989
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	4.0013	39	-	JZCL02	174	3889	3736	3/3/15	3/22/17	Contig	JCVI	SAMN03277100	GCA_000939475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/475/GCA_000939475.2_ASM93947v2	-	ORAB09
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.23043	66.5	-	LRZW01	64	5943	5624	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436505	GCA_001554315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/315/GCA_001554315.1_ASM155431v1	27103710	AU21076
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05208	39.8	-	CLQO01	63	2256	2043	3/21/15	3/10/17	Contig	SC	SAMEA1028910	GCA_001132325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/325/GCA_001132325.1_6949_4_22	-	SMRU2494
Escherichia coli UMEA 3160-1	1281198	PRJNA186300	186300	Proteobacteria	Gammaproteobacteria	5.17478	50.4	-	AWBS01	12	5326	4983	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885910	GCA_000460435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/435/GCA_000460435.1_Esch_coli_UMEA_3160-1_V1	-	UMEA 3160-1
Mycobacterium tuberculosis UT0050	1408929	PRJNA223561	223561	Terrabacteria group	Actinobacteria	4.43129	65.5	-	JLPM01	5	4299	4106	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381006	GCA_000668455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/455/GCA_000668455.1_Myco_tube_UT0050_V1	-	UT0050
Listeria monocytogenes	1639	PRJEB20033	379569	Terrabacteria group	Firmicutes	3.13671	38.2	-	FWEJ01	891	3092	2948	3/21/17	3/24/17	Contig	UNIMI	SAMEA103917906	GCA_900169635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/635/GCA_900169635.1_5478	-	-
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.7557	30.8	-	NFQG01	67	1865	1706	6/8/17	6/10/17	Scaffold	Swansea University	SAMN06888263	GCA_002178815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/815/GCA_002178815.1_ASM217881v1	28493321	isolate_A1
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000967	1183390	PRJNA163179	163179	Proteobacteria	Gammaproteobacteria	4.7625	52.2	-	JRBV01	280	4865	4577	9/5/14	2/27/17	Contig	FDA	SAMN01942236	GCA_000749375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/375/GCA_000749375.1_CFSAN000967_01.0	-	CFSAN000967
Staphylococcus aureus M0989	1392017	PRJNA217101	217101	Terrabacteria group	Firmicutes	2.85065	32.8	-	JCTN01	41	2991	2817	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334625	GCA_000546185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/185/GCA_000546185.1_Stap_aure_M0989_V1	-	M0989
Staphylococcus aureus M0993	1392020	PRJNA217104	217104	Terrabacteria group	Firmicutes	2.91936	32.9	-	JCTO01	32	3069	2902	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334628	GCA_000546205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/205/GCA_000546205.1_Stap_aure_M0993_V1	-	M0993
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000969	1183392	PRJNA163183	163183	Proteobacteria	Gammaproteobacteria	4.75949	52.2	-	JRBU01	235	4827	4581	9/5/14	2/26/17	Contig	FDA	SAMN01942241	GCA_000749395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/395/GCA_000749395.1_CFSAN000969_01.0	-	CFSAN000969
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.75609	30.1	-	NFPA01	16	1821	1675	6/8/17	6/10/17	Scaffold	Swansea University	SAMN06888295	GCA_002179335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/335/GCA_002179335.1_ASM217933v1	28493321	isolate_H23
Listeria monocytogenes	1639	PRJEB20033	379569	Terrabacteria group	Firmicutes	3.06823	38.1	-	FWDS01	449	3116	2964	3/21/17	3/24/17	Contig	UNIMI	SAMEA103917903	GCA_900169645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/645/GCA_900169645.1_5471	-	-
Mycobacterium tuberculosis UT0051	1408930	PRJNA223562	223562	Terrabacteria group	Actinobacteria	4.43677	65.4	-	JLPL01	5	4290	4094	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381007	GCA_000668475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/475/GCA_000668475.1_Myco_tube_UT0051_V1	-	UT0051
Escherichia coli UMEA 3161-1	1281199	PRJNA186301	186301	Proteobacteria	Gammaproteobacteria	5.19015	50.5	-	AWBT01	16	5334	4980	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885911	GCA_000460455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/455/GCA_000460455.1_Esch_coli_UMEA_3161-1_V1	-	UMEA 3161-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06127	39.6	-	CNTY02	196	2221	1996	3/23/15	3/6/17	Contig	SC	SAMEA1032597	GCA_001132465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/465/GCA_001132465.2_6999_5_18	-	209464
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.57612	66.3	-	LRYJ01	48	6306	6018	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436467	GCA_001554325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/325/GCA_001554325.1_ASM155432v1	27103710	AU5471
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.85673	38.8	-	JZCK02	162	3737	3593	3/3/15	3/22/17	Contig	JCVI	SAMN03277101	GCA_000939485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/485/GCA_000939485.2_ASM93948v2	-	ORAB10
Clostridioides difficile DA00165	1151334	PRJNA85843	85843	Terrabacteria group	Firmicutes	4.15806	28.5	-	AVJI01	14	4530	4447	8/20/13	8/20/13	Contig	Institute for Genome Sciences	SAMN01978896	GCA_000450225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/225/GCA_000450225.2_ASM45022v2	-	DA00165
Klebsiella pneumoniae	573	PRJNA261555	261555	Proteobacteria	Gammaproteobacteria	5.36647	57.3	-	JUBE01	124	5379	5133	8/5/16	2/21/17	Contig	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN03223383	GCA_001699095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/095/GCA_001699095.1_ASM169909v1	-	XH216
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15878	64.1	-	FSLG01	8	5227	5104	12/14/16	3/21/17	Scaffold	SC	SAMEA2275806	GCA_900137795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/795/GCA_900137795.1_12163_2_53	-	1080
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.2311	63.8	-	FSLH01	55	5207	5077	12/14/16	3/21/17	Scaffold	SC	SAMEA2275808	GCA_900137805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/805/GCA_900137805.1_12163_2_54	-	1082
Klebsiella pneumoniae	573	PRJNA261555	261555	Proteobacteria	Gammaproteobacteria	5.36132	57.4	-	JUGC01	174	5345	5107	8/5/16	2/21/17	Contig	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN03252408	GCA_001699105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/699/105/GCA_001699105.1_ASM169910v1	-	XH210
Clostridioides difficile F501	1151372	PRJNA85919	85919	Terrabacteria group	Firmicutes	4.72298	52.8	-	AVKQ01	264	4630	4575	8/20/13	4/22/14	Contig	Institute for Genome Sciences	SAMN01978905	GCA_000450805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/450/805/GCA_000450805.2_ASM45080v2	-	F501
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	4.00072	39	-	JZCJ02	177	3890	3735	3/3/15	3/22/17	Contig	JCVI	SAMN03277098	GCA_000939495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/495/GCA_000939495.2_ASM93949v2	-	ORAB13
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.71237	66.2	-	LRYD01	84	6474	6147	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436461	GCA_001554375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/375/GCA_001554375.1_ASM155437v1	27103710	AU9381
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.11636	39.6	-	CNQX02	142	2306	2102	3/23/15	3/11/17	Contig	SC	SAMEA1032626	GCA_001132685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/685/GCA_001132685.2_6952_7_5	-	R34-3166
Escherichia coli UMEA 3162-1	1281200	PRJNA186302	186302	Proteobacteria	Gammaproteobacteria	5.2556	50.6	-	AWBU01	16	5500	5133	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885912	GCA_000460475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/475/GCA_000460475.1_Esch_coli_UMEA_3162-1_V1	-	UMEA 3162-1
Mycobacterium tuberculosis UT0052	1408931	PRJNA223563	223563	Terrabacteria group	Actinobacteria	4.40807	65.6	-	JLPK01	6	4287	4116	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381008	GCA_000668495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/495/GCA_000668495.1_Myco_tube_UT0052_V1	-	UT0052
Listeria monocytogenes	1639	PRJEB20033	379569	Terrabacteria group	Firmicutes	3.1304	38.1	-	FWDW01	469	3135	2996	3/21/17	3/24/17	Contig	UNIMI	SAMEA103917910	GCA_900169675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/675/GCA_900169675.1_5485	-	-
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.67576	30.7	-	NFPW01	303	1864	1573	6/8/17	6/10/17	Scaffold	Swansea University	SAMN06888273	GCA_002179415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/415/GCA_002179415.1_ASM217941v1	28493321	isolate_C2
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000970	1183393	PRJNA163185	163185	Proteobacteria	Gammaproteobacteria	4.76602	52.2	-	JRBT01	129	4841	4597	9/5/14	2/27/17	Contig	FDA	SAMN01942296	GCA_000749415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/415/GCA_000749415.1_CFSAN000970_01.0	-	CFSAN000970
Staphylococcus aureus M0997	1392022	PRJNA217106	217106	Terrabacteria group	Firmicutes	2.87289	32.8	-	JCTP01	72	3017	2828	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334630	GCA_000546225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/225/GCA_000546225.1_Stap_aure_M0997_V1	-	M0997
Staphylococcus aureus M1000	1392023	PRJNA217107	217107	Terrabacteria group	Firmicutes	2.912	32.9	-	JCTQ01	74	3081	2882	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334631	GCA_000546245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/245/GCA_000546245.1_Stap_aure_M1000_V1	-	M1000
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000186	1173474	PRJNA159373	159373	Proteobacteria	Gammaproteobacteria	4.68433	52.2	-	JREG01	57	4729	4521	9/5/14	2/26/17	Contig	FDA	SAMN00996621	GCA_000749435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/435/GCA_000749435.1_CFSAN000186_01.0	-	CFSAN000186
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.6526	30.3	-	CZIH01	30	1753	1623	10/11/15	3/19/17	Scaffold	LSHTM	SAMEA3556552	GCA_900000215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/000/215/GCA_900000215.1_50_S47	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJEB20033	379569	Terrabacteria group	Firmicutes	3.18637	38.4	-	FWDY01	935	3151	2970	3/21/17	3/24/17	Contig	UNIMI	SAMEA103917905	GCA_900169725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/725/GCA_900169725.1_5477	-	-
Mycobacterium tuberculosis UT0053	1408932	PRJNA223564	223564	Terrabacteria group	Actinobacteria	4.46165	65.6	-	JLPJ01	42	4374	4186	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381009	GCA_000668515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/515/GCA_000668515.1_Myco_tube_UT0053_V1	-	UT0053
Escherichia coli UMEA 3163-1	1281201	PRJNA186303	186303	Proteobacteria	Gammaproteobacteria	5.16869	50.5	-	AWBV01	7	5141	4845	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885913	GCA_000460495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/495/GCA_000460495.1_Esch_coli_UMEA_3163-1_V1	-	UMEA 3163-1
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.07736	39.6	-	CMVP01	113	2217	1967	3/23/15	3/4/17	Contig	SC	SAMEA1991756	GCA_001132745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/745/GCA_001132745.1_5756_5_1	-	260
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.51793	66.4	-	LRYK01	57	6245	5893	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436468	GCA_001554385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/385/GCA_001554385.1_ASM155438v1	27103710	AU10241
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.99222	39	-	JZCI02	174	3876	3727	3/3/15	3/22/17	Contig	JCVI	SAMN03277103	GCA_000939535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/535/GCA_000939535.2_ASM93953v2	-	ORAB14
Clostridioides difficile Y384	1151391	PRJNA85957	85957	Terrabacteria group	Firmicutes	6.9112	32.5	-	AVLJ01	800	6951	6885	8/20/13	4/22/14	Contig	Institute for Genome Sciences	SAMN01766766	GCA_000451045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/045/GCA_000451045.2_ASM45104v2	-	Y384
Klebsiella pneumoniae	573	PRJNA307517	307517	Proteobacteria	Gammaproteobacteria	5.62312	57.1	-	LXMK01	89	5745	5504	8/9/16	2/21/17	Contig	The Unniversity of Queensland	SAMN04868739	GCA_001701355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/355/GCA_001701355.1_ASM170135v1	-	19_GR_14
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.91329	64.3	-	FVPU01	15	4875	4730	3/10/17	3/18/17	Scaffold	SC	SAMEA2275810	GCA_900137815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/815/GCA_900137815.1_12163_2_56	-	1084
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.36128	64.1	-	FSLL01	30	5443	5264	12/14/16	3/21/17	Scaffold	SC	SAMEA2275811	GCA_900137825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/825/GCA_900137825.1_12163_2_57	-	1085
Klebsiella pneumoniae	573	PRJNA307517	307517	Proteobacteria	Gammaproteobacteria	5.65565	57.1	-	LXMQ01	142	5802	5536	8/9/16	2/21/17	Contig	The Unniversity of Queensland	SAMN04868733	GCA_001701365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/365/GCA_001701365.1_ASM170136v1	-	13_GR_14
Clostridioides difficile Y184	1151379	PRJNA85933	85933	Terrabacteria group	Firmicutes	3.02147	28.6	-	AVKX01	708	3017	3002	8/20/13	8/20/13	Contig	Institute for Genome Sciences	SAMN01766739	GCA_000451125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/451/125/GCA_000451125.2_ASM45112v2	-	Y184
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	4.00226	39	-	JZCG02	176	3887	3730	3/3/15	3/21/17	Contig	JCVI	SAMN03277094	GCA_000939555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/555/GCA_000939555.2_ASM93955v2	-	ORAB16
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.51557	66.3	-	LRYE01	76	6264	5977	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436462	GCA_001554395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/395/GCA_001554395.1_ASM155439v1	27103710	AU10014
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1128	39.6	-	CKVG01	63	2371	2140	3/21/15	3/4/17	Contig	SC	SAMEA1026163	GCA_001132805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/805/GCA_001132805.1_6823_3_4	-	SMRU1900
Escherichia coli UMEA 3172-1	1281202	PRJNA186304	186304	Proteobacteria	Gammaproteobacteria	5.27935	50.4	-	AWBW01	13	5463	5052	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885914	GCA_000460515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/515/GCA_000460515.1_Esch_coli_UMEA_3172-1_V1	-	UMEA 3172-1
Mycobacterium tuberculosis UT0055	1408933	PRJNA223565	223565	Terrabacteria group	Actinobacteria	4.37093	65.5	-	JLPI01	8	4266	4084	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381010	GCA_000668535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/535/GCA_000668535.1_Myco_tube_UT0055_V1	-	UT0055
Listeria monocytogenes	1639	PRJEB20033	379569	Terrabacteria group	Firmicutes	3.08091	38.1	-	FWEB01	519	3092	2964	3/21/17	3/24/17	Contig	UNIMI	SAMEA103917908	GCA_900169885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/885/GCA_900169885.1_5482	-	-
Campylobacter jejuni	197	PRJEB10566	312630	Proteobacteria	delta/epsilon subdivisions	1.443	30.4	-	FCEZ01	95	1588	1369	2/18/16	3/19/17	Scaffold	UMR 1014 SECALIM	SAMEA3726902	GCA_900036015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/015/GCA_900036015.1_PRJEB10566	-	-
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000178	1173464	PRJNA159353	159353	Proteobacteria	Gammaproteobacteria	4.79139	52.2	-	JREM01	86	4922	4687	9/5/14	2/26/17	Contig	FDA	SAMN00862137	GCA_000749455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/455/GCA_000749455.1_CFSAN000178_01.0	-	CFSAN000178
Staphylococcus aureus M1002	1392024	PRJNA217108	217108	Terrabacteria group	Firmicutes	2.86817	32.8	-	JCTR01	41	3017	2862	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334632	GCA_000546265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/265/GCA_000546265.1_Stap_aure_M1002_V1	-	M1002
Staphylococcus aureus M1003	1392025	PRJNA217109	217109	Terrabacteria group	Firmicutes	2.89772	32.8	-	JCTS01	17	3038	2870	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334633	GCA_000546285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/285/GCA_000546285.1_Stap_aure_M1003_V1	-	M1003
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000185	1173425	PRJNA159275	159275	Proteobacteria	Gammaproteobacteria	4.58113	52.2	-	JREH01	97	4644	4409	9/5/14	2/26/17	Contig	FDA	SAMN01942298	GCA_000749505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/505/GCA_000749505.1_CFSAN000185_01.0	-	CFSAN000185
Mycoplasma mycoides subsp. capri str. GM12	436113	PRJNA39245	39245	Terrabacteria group	Tenericutes	1.08459	23.9	chromosome:NZ_CP001668.1/CP001668.1	-	1	942	846	8/21/09	3/29/17	Complete Genome	JCVI	SAMN02603459	GCA_000023685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/023/685/GCA_000023685.1_ASM2368v1	19696314	GM12
Listeria monocytogenes	1639	PRJEB20033	379569	Terrabacteria group	Firmicutes	3.02313	38	-	FWDZ01	307	3065	2946	3/21/17	3/24/17	Contig	UNIMI	SAMEA103917902	GCA_900169905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/905/GCA_900169905.1_5468	-	-
Mycobacterium tuberculosis UT0056	1408934	PRJNA223566	223566	Terrabacteria group	Actinobacteria	4.41416	65.6	-	JLPH01	80	4334	4121	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381011	GCA_000668555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/555/GCA_000668555.1_Myco_tube_UT0056_V1	-	UT0056
Escherichia coli UMEA 3173-1	1281203	PRJNA186305	186305	Proteobacteria	Gammaproteobacteria	5.15853	50.5	-	AWBX01	16	5291	4936	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885915	GCA_000460535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/535/GCA_000460535.1_Esch_coli_UMEA_3173-1_V1	-	UMEA 3173-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09556	39.6	-	COEN02	136	2288	2068	3/23/15	3/5/17	Contig	SC	SAMEA1463146	GCA_001132825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/825/GCA_001132825.2_7622_5_51	-	MD5035
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.69771	66.2	-	LRYF01	105	6472	6126	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436463	GCA_001554425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/425/GCA_001554425.1_ASM155442v1	27103710	AU10015
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.9803	39	-	JZCH02	174	3863	3714	3/3/15	3/22/17	Contig	JCVI	SAMN03277104	GCA_000939565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/565/GCA_000939565.2_ASM93956v2	-	ORAB15
Clostridioides difficile	1496	PRJNA352920	352920	Terrabacteria group	Firmicutes	3.91126	29.3	-	MPDT01	1846	3897	2740	12/9/16	12/9/16	Contig	Public Health Agency of Sweden	SAMN06006900	GCA_001896375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/375/GCA_001896375.1_ASM189637v1	27752322	MX213
Klebsiella pneumoniae	573	PRJNA307517	307517	Proteobacteria	Gammaproteobacteria	5.75041	57	-	LXMH01	105	5915	5661	8/9/16	2/21/17	Contig	The Unniversity of Queensland	SAMN04868742	GCA_001701395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/395/GCA_001701395.1_ASM170139v1	-	22_GR_12
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.84113	64.1	-	FVPR01	16	4800	4649	3/10/17	3/18/17	Scaffold	SC	SAMEA2275841	GCA_900137835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/835/GCA_900137835.1_12163_2_75	-	1115
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21433	64.1	-	FSLN01	41	5310	5108	12/14/16	3/22/17	Scaffold	SC	SAMEA2275822	GCA_900137845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/845/GCA_900137845.1_12163_2_65	-	1096
Klebsiella pneumoniae	573	PRJNA307517	307517	Proteobacteria	Gammaproteobacteria	5.81051	57	-	LXMF01	281	5991	5705	8/9/16	2/21/17	Contig	The Unniversity of Queensland	SAMN04868744	GCA_001701415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/415/GCA_001701415.1_ASM170141v1	-	24_GR_13
Clostridioides difficile	1496	PRJNA352922	352922	Terrabacteria group	Firmicutes	4.33678	28.8	-	MPDV01	2008	4452	3448	12/9/16	12/9/16	Contig	Public Health Agency of Sweden	SAMN06006903	GCA_001896395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/395/GCA_001896395.1_ASM189639v1	27752322	NT422
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.97559	39	-	JZCF02	172	3862	3708	3/3/15	3/22/17	Contig	JCVI	SAMN03277093	GCA_000939575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/575/GCA_000939575.2_ASM93957v2	-	ORAB17
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.51868	66.4	-	LRYG01	89	6303	5966	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436464	GCA_001554455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/455/GCA_001554455.1_ASM155445v1	27103710	AU10714
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.04031	39.7	-	CLJI01	56	2255	2040	3/21/15	3/4/17	Contig	SC	SAMEA1029047	GCA_001132865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/865/GCA_001132865.1_6925_7_18	-	SMRU2514
Escherichia coli UMEA 3174-1	1281204	PRJNA186306	186306	Proteobacteria	Gammaproteobacteria	5.27995	50.7	-	AWBY01	31	5511	5089	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885916	GCA_000460555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/555/GCA_000460555.1_Esch_coli_UMEA_3174-1_V1	-	UMEA 3174-1
Mycobacterium tuberculosis UT0057	1408935	PRJNA223567	223567	Terrabacteria group	Actinobacteria	4.41889	65.5	-	JLPG01	10	4292	4120	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381012	GCA_000668575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/575/GCA_000668575.1_Myco_tube_UT0057_V1	-	UT0057
Listeria monocytogenes	1639	PRJEB20033	379569	Terrabacteria group	Firmicutes	2.94874	38.1	-	FWEI01	581	2924	2800	3/21/17	3/24/17	Contig	UNIMI	SAMEA103917909	GCA_900169945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/945/GCA_900169945.1_5483	-	-
Spiroplasma taiwanense CT-1	1276220	PRJNA184744	184744	Terrabacteria group	Tenericutes	1.08628	23.8908	chromosome:NC_021846.1/CP005074.1; plasmid unnamed:NC_021832.1/CP005075.1	-	2	1121	1066	7/17/13	4/17/17	Complete Genome	Academia Sinica	SAMN02602966	GCA_000439435.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/435/GCA_000439435.1_ASM43943v1	23873917	CT-1
Salmonella enterica subsp. enterica serovar Newport str. SL254	423368	PRJEB6881	256953	Proteobacteria	Gammaproteobacteria	4.71746	52.3	-	CCMR01	12	4780	4521	9/6/14	2/26/17	Contig	URMITE	SAMEA2673767	GCA_000751335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/335/GCA_000751335.1_Salmonella_enterica_subsp._enterica_strain_100TC3	-	-
Staphylococcus aureus M1006	1392026	PRJNA217110	217110	Terrabacteria group	Firmicutes	2.85402	32.8	-	JCTT01	44	3021	2855	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334634	GCA_000546305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/305/GCA_000546305.1_Stap_aure_M1006_V1	-	M1006
Staphylococcus aureus M1009	1392028	PRJNA217112	217112	Terrabacteria group	Firmicutes	2.87034	32.8	-	JCTU01	47	3035	2856	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334636	GCA_000546325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/325/GCA_000546325.1_Stap_aure_M1009_V1	-	M1009
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69437	52.2	-	JSWT01	1	4742	4482	11/5/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN02678551	GCA_000772635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/772/635/GCA_000772635.1_PDT000034041.1	-	FCC0146
Campylobacter jejuni subsp. jejuni 414	683083	PRJNA33821	33821	Proteobacteria	delta/epsilon subdivisions	1.71012	29.5986	chromosome:CM000855.1	ADGM01	1	3680	3600	1/12/10	1/8/14	Chromosome	University of Liverpool	SAMN02471183	GCA_000163995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/995/GCA_000163995.1_ASM16399v1	21418497	414
Listeria monocytogenes	1639	PRJNA296375	296375	Terrabacteria group	Firmicutes	3.02668	37.8	-	LKHO02	30	3078	2997	10/16/15	8/16/17	Scaffold	UFRGS	SAMN04100157	GCA_001317555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/555/GCA_001317555.2_ASM131755v2	26679596	55G
Mycobacterium tuberculosis UT0058	1408936	PRJNA223568	223568	Terrabacteria group	Actinobacteria	4.42983	65.5	-	JLPF01	7	4302	4102	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381013	GCA_000668595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/595/GCA_000668595.1_Myco_tube_UT0058_V1	-	UT0058
Escherichia coli UMEA 3175-1	1281205	PRJNA186307	186307	Proteobacteria	Gammaproteobacteria	5.2889	50.3	-	AWBZ01	11	5395	5023	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885917	GCA_000460575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/575/GCA_000460575.1_Esch_coli_UMEA_3175-1_V1	-	UMEA 3175-1
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.03953	39.7	-	CKJT01	66	2245	2029	3/21/15	3/4/17	Contig	SC	SAMEA1024159	GCA_001132945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/945/GCA_001132945.1_6631_6_14	-	19F
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.64454	66.3	-	LRYI01	59	6403	6101	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436466	GCA_001554465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/465/GCA_001554465.1_ASM155446v1	27103710	AU2342
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.97419	39	-	JZCE02	169	3854	3700	3/3/15	3/21/17	Contig	JCVI	SAMN03277096	GCA_000939615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/615/GCA_000939615.2_ASM93961v2	-	ORAB18
Clostridioides difficile	1496	PRJNA352921	352921	Terrabacteria group	Firmicutes	4.18691	28.6	-	MPDU01	1861	4296	3332	12/9/16	12/9/16	Contig	Public Health Agency of Sweden	SAMN06006901	GCA_001896405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/405/GCA_001896405.1_ASM189640v1	27752322	NT049
Klebsiella pneumoniae	573	PRJNA307517	307517	Proteobacteria	Gammaproteobacteria	5.72443	57	-	LXNC01	119	5819	5516	8/9/16	2/21/17	Contig	The Unniversity of Queensland	SAMN04868721	GCA_001701425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/425/GCA_001701425.1_ASM170142v1	-	1_GR_13
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.30361	64.1	-	FVPQ01	13	5400	5273	3/10/17	3/18/17	Scaffold	SC	SAMEA2275760	GCA_900137865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/865/GCA_900137865.1_12163_2_7	-	1034
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.79774	64.2	-	FVPW01	6	4821	4700	3/10/17	3/18/17	Scaffold	SC	SAMEA2275846	GCA_900137875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/875/GCA_900137875.1_12163_2_80	-	1120
Klebsiella pneumoniae	573	PRJNA307517	307517	Proteobacteria	Gammaproteobacteria	5.68003	57.1	-	LXMW01	119	5858	5591	8/9/16	2/21/17	Contig	The Unniversity of Queensland	SAMN04868727	GCA_001701445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/445/GCA_001701445.1_ASM170144v1	-	7_GR_13
Clostridioides difficile	1496	PRJNA352924	352924	Terrabacteria group	Firmicutes	4.27041	28.6	-	MPDX01	1992	4321	3464	12/9/16	12/9/16	Contig	Public Health Agency of Sweden	SAMN06006905	GCA_001896425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/425/GCA_001896425.1_ASM189642v1	27752322	NT2700
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.98908	39	-	JZCD02	175	3871	3718	3/3/15	3/22/17	Contig	JCVI	SAMN03277102	GCA_000939635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/635/GCA_000939635.2_ASM93963v2	-	ORAB19
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.74654	66.2	-	LRYL01	66	6461	6171	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436469	GCA_001554495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/495/GCA_001554495.1_ASM155449v1	27103710	AU6854
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.16116	39.6	-	CKSF01	51	2367	2138	3/21/15	3/4/17	Contig	SC	SAMEA1023731	GCA_001132965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/965/GCA_001132965.1_6680_8_6	-	SMRU198
Escherichia coli UMEA 3176-1	1281206	PRJNA186308	186308	Proteobacteria	Gammaproteobacteria	4.87987	50.7	-	AWCA01	11	4993	4666	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885918	GCA_000460595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/595/GCA_000460595.1_Esch_coli_UMEA_3176-1_V1	-	UMEA 3176-1
Mycobacterium tuberculosis UT0059	1408937	PRJNA223569	223569	Terrabacteria group	Actinobacteria	4.40138	65.6	-	JLPE01	9	4280	4112	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381014	GCA_000668615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/615/GCA_000668615.1_Myco_tube_UT0059_V1	-	UT0059
Listeria monocytogenes	1639	PRJNA296408	296408	Terrabacteria group	Firmicutes	3.03671	37.9	-	LKCY02	24	3088	2996	10/16/15	8/16/17	Scaffold	UFRGS	SAMN04100154	GCA_001342195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/195/GCA_001342195.2_ASM134219v2	26679596	47G
Campylobacter jejuni subsp. jejuni 81-176	354242	PRJNA17341	17341	Proteobacteria	delta/epsilon subdivisions	1.61617	30.6	chromosome:AASL01000001.1	AASL01	1	1669	1449	7/20/06	3/19/10	Chromosome	"Section of Microbial Pathogenesis, School of Medicine, Yale University"	SAMN02472139	GCA_000168755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/755/GCA_000168755.1_ASM16875v1	16861657	81-176
Salmonella enterica	28901	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.78654	52.2	-	JTBM01	3	4892	4587	11/14/14	7/6/17	Contig	US Food and Drug Administration 	SAMN02934521	GCA_000783815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/815/GCA_000783815.1_ASM78381v1	-	FDAARGOS_70
Staphylococcus aureus M1011	1392029	PRJNA217113	217113	Terrabacteria group	Firmicutes	2.86957	32.8	-	JCTV01	44	3019	2842	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334637	GCA_000546345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/345/GCA_000546345.1_Stap_aure_M1011_V1	-	M1011
Staphylococcus aureus M1012	1392030	PRJNA217114	217114	Terrabacteria group	Firmicutes	2.8665	32.8	-	JCTW01	35	3019	2860	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334638	GCA_000546365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/365/GCA_000546365.1_Stap_aure_M1012_V1	-	M1012
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA260777	260777	Proteobacteria	Gammaproteobacteria	4.92735	52.1	-	JRGS01	146	5072	4834	11/17/14	2/26/17	Contig	University of Copenhagen	SAMN03031254	GCA_000784215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/215/GCA_000784215.1_ASM78421v1	25540347	S7
Campylobacter jejuni K5	1365662	PRJNA212387	212387	Proteobacteria	delta/epsilon subdivisions	3.32193	30.8	-	AUUP01	141	3527	3398	5/7/14	5/29/14	Scaffold	University of Exeter	SAMN02744567	GCA_000686425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/686/425/GCA_000686425.1_Assembly_1	24856088	k5
Listeria monocytogenes	1639	PRJNA246743	246743	Terrabacteria group	Firmicutes	2.93828	37.8	-	JNGY01	47	2997	2927	12/14/15	3/1/17	Scaffold	Centers for Disease Control and Prevention	SAMN02769898	GCA_001466155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/155/GCA_001466155.1_ASM146615v1	-	2012-L5323
Mycobacterium tuberculosis UT0060	1408938	PRJNA223570	223570	Terrabacteria group	Actinobacteria	4.39003	65.6	-	JLPD01	2	4273	4108	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381015	GCA_000668635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/635/GCA_000668635.1_Myco_tube_UT0060_V1	-	UT0060
Escherichia coli UMEA 3178-1	1281207	PRJNA186309	186309	Proteobacteria	Gammaproteobacteria	5.23682	50.4	-	AWCB01	19	5340	4999	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885919	GCA_000460615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/615/GCA_000460615.1_Esch_coli_UMEA_3178-1_V1	-	UMEA 3178-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.059	39.6	-	CNTL02	120	2226	2012	3/22/15	3/5/17	Contig	SC	SAMEA1032661	GCA_001132985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/985/GCA_001132985.2_6999_4_6	-	93209
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.83723	66.1	-	LRYN01	70	6565	6232	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436471	GCA_001554505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/505/GCA_001554505.1_ASM155450v1	27103710	AU20916
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.88272	38.9	-	JZIX02	65	3746	3622	3/6/15	3/18/17	Contig	JCVI	SAMN03084789	GCA_000949035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/035/GCA_000949035.2_ASM94903v2	-	UH66_271
Clostridioides difficile	1496	PRJNA352925	352925	Terrabacteria group	Firmicutes	4.16374	28.5	-	MPDY01	1774	4217	3370	12/9/16	12/9/16	Contig	Public Health Agency of Sweden	SAMN06006906	GCA_001896455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/455/GCA_001896455.1_ASM189645v1	27752322	NT513
Klebsiella pneumoniae	573	PRJNA307517	307517	Proteobacteria	Gammaproteobacteria	5.61275	57.1	-	LXMO01	160	5789	5524	8/9/16	2/21/17	Contig	The Unniversity of Queensland	SAMN04868735	GCA_001701475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/475/GCA_001701475.1_ASM170147v1	-	15_GR_13
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.92891	64.2	-	FVPT01	12	4886	4740	3/10/17	3/18/17	Scaffold	SC	SAMEA2275855	GCA_900137895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/895/GCA_900137895.1_12163_2_87	-	1129
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.34858	64	-	FSLQ01	39	5432	5220	12/14/16	3/22/17	Scaffold	SC	SAMEA2275859	GCA_900137915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/915/GCA_900137915.1_12163_2_90	-	1133
Klebsiella pneumoniae	573	PRJNA307517	307517	Proteobacteria	Gammaproteobacteria	5.79925	56.9	-	LXMM01	169	5987	5672	8/9/16	2/21/17	Contig	The Unniversity of Queensland	SAMN04868737	GCA_001701495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/495/GCA_001701495.1_ASM170149v1	-	17_GR_14
Clostridioides difficile	1496	PRJNA352923	352923	Terrabacteria group	Firmicutes	4.01619	28.5	-	MPDW01	801	3846	2944	12/9/16	12/9/16	Contig	Public Health Agency of Sweden	SAMN06006904	GCA_001896475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/475/GCA_001896475.1_ASM189647v1	27752322	NT1619
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.03857	39	-	JZJA02	146	3976	3763	3/6/15	3/18/17	Contig	JCVI	SAMN03084845	GCA_000949045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/045/GCA_000949045.2_ASM94904v2	-	UH381_484
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.52949	66.1	-	LRYP01	76	6376	6072	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436473	GCA_001554535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/535/GCA_001554535.1_ASM155453v1	27103710	AU12175
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09992	39.6	-	CLBV01	94	2320	2095	3/21/15	3/4/17	Contig	SC	SAMEA1025862	GCA_001133085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/085/GCA_001133085.1_6871_1_9	-	SMRU1785
Escherichia coli UMEA 3180-1	1281208	PRJNA186310	186310	Proteobacteria	Gammaproteobacteria	5.15636	50.4	-	AWCC01	17	5331	4937	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885920	GCA_000460635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/635/GCA_000460635.1_Esch_coli_UMEA_3180-1_V1	-	UMEA 3180-1
Mycobacterium tuberculosis UT0067	1408939	PRJNA223571	223571	Terrabacteria group	Actinobacteria	4.41479	65.6	-	JLPC01	64	4329	4124	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381016	GCA_000668655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/655/GCA_000668655.1_Myco_tube_UT0067_V1	-	UT0067
Listeria monocytogenes	1639	PRJNA246743	246743	Terrabacteria group	Firmicutes	2.93678	37.8	-	JNGZ01	37	3004	2927	12/14/15	3/1/17	Scaffold	Centers for Disease Control and Prevention	SAMN02769899	GCA_001466195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/195/GCA_001466195.1_ASM146619v1	-	2012-L5324
Campylobacter jejuni subsp. jejuni CG8486	398000	PRJNA17055	17055	Proteobacteria	delta/epsilon subdivisions	1.59769	30.4	-	AASY01	19	1587	1425	4/25/07	1/8/14	Contig	NMRC	SAMN02470657	GCA_000168795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/795/GCA_000168795.1_ASM16879v1	17438034	CG8486
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA260779	260779	Proteobacteria	Gammaproteobacteria	4.82338	52.1	-	JRGU01	138	4938	4721	11/17/14	2/27/17	Contig	University of Copenhagen	SAMN03031272	GCA_000784225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/225/GCA_000784225.1_ASM78422v1	-	S10
Staphylococcus aureus M1013	1392031	PRJNA217115	217115	Terrabacteria group	Firmicutes	2.89512	32.9	-	JCTX01	24	3050	2878	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334639	GCA_000546385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/385/GCA_000546385.1_Stap_aure_M1013_V1	-	M1013
Staphylococcus aureus M1014	1392032	PRJNA217116	217116	Terrabacteria group	Firmicutes	2.90842	32.8	-	JCTY01	64	3091	2917	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334640	GCA_000546405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/405/GCA_000546405.1_Stap_aure_M1014_V1	-	M1014
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA260778	260778	Proteobacteria	Gammaproteobacteria	4.91432	52.1	-	JRGT01	148	5056	4809	11/17/14	2/26/17	Contig	University of Copenhagen	SAMN03031271	GCA_000784235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/235/GCA_000784235.1_ASM78423v1	25540347	S23
Campylobacter jejuni subsp. jejuni DFVF1099	691336	PRJNA41639	41639	Proteobacteria	delta/epsilon subdivisions	1.73386	30.4	-	ADHK01	71	1962	1920	1/3/11	1/8/14	Contig	"Faculty of Life Sciences, Department of Food Science, University of Copenhagen"	SAMN02469773	GCA_000184805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/184/805/GCA_000184805.2_ASM18480v2	21914871	DFVF1099
Listeria monocytogenes	1639	PRJNA229903	229903	Terrabacteria group	Firmicutes	2.97752	37.8	-	MJOD01	20	3009	2931	9/29/16	3/1/17	Scaffold	FDA/CFSAN	SAMN03277738	GCA_001749845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/845/GCA_001749845.1_ASM174984v1	-	NRRL B-33014
Mycobacterium tuberculosis UT0069	1408940	PRJNA223572	223572	Terrabacteria group	Actinobacteria	4.43172	65.6	-	JLPB01	7	4310	4099	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381017	GCA_000668675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/675/GCA_000668675.1_Myco_tube_UT0069_V1	-	UT0069
Escherichia coli UMEA 3185-1	1281209	PRJNA186311	186311	Proteobacteria	Gammaproteobacteria	5.14993	50.4	-	AWCD01	9	5229	4913	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885921	GCA_000460655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/655/GCA_000460655.1_Esch_coli_UMEA_3185-1_V1	-	UMEA 3185-1
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99137	39.7	-	CQQX01	44	2205	1981	3/22/15	3/4/17	Contig	SC	SAMEA970301	GCA_001133165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/165/GCA_001133165.1_5159_6_8	-	BHN621
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.5197	66.1	-	LRYQ01	38	6334	6058	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436474	GCA_001554545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/545/GCA_001554545.1_ASM155454v1	27103710	AU13212
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.881	38.8	-	JZIZ02	71	3745	3617	3/6/15	3/18/17	Contig	JCVI	SAMN03084784	GCA_000949055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/055/GCA_000949055.2_ASM94905v2	-	UH66_253
Clostridioides difficile	1496	PRJNA352926	352926	Terrabacteria group	Firmicutes	4.32932	29.1	-	MPDZ01	1862	4353	3436	12/9/16	12/9/16	Contig	Public Health Agency of Sweden	SAMN06006907	GCA_001896485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/896/485/GCA_001896485.1_ASM189648v1	27752322	NT949
Klebsiella pneumoniae	573	PRJNA307517	307517	Proteobacteria	Gammaproteobacteria	5.81354	57	-	LXMV01	128	5977	5704	8/9/16	2/21/17	Contig	The Unniversity of Queensland	SAMN04868728	GCA_001701505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/505/GCA_001701505.1_ASM170150v1	-	8_GR_13
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.901	64.2	-	FVPV01	6	4921	4791	3/10/17	3/18/17	Scaffold	SC	SAMEA2275761	GCA_900137945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/945/GCA_900137945.1_12163_2_9	-	1035
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.108	64.2	-	FSLP01	18	5104	4993	12/14/16	3/21/17	Scaffold	SC	SAMEA2160658	GCA_900137965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/965/GCA_900137965.1_10660_1_4	-	553
Klebsiella pneumoniae	573	PRJNA307517	307517	Proteobacteria	Gammaproteobacteria	5.6737	57.1	-	LXML01	91	5810	5562	8/9/16	2/21/17	Contig	The Unniversity of Queensland	SAMN04868738	GCA_001701525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/525/GCA_001701525.1_ASM170152v1	-	18_GR_14
Clostridioides difficile	1496	PRJNA360827	360827	Terrabacteria group	Firmicutes	4.30342	28.8	-	MUJV01	2	-	-	2/10/17	2/10/17	Contig	Georgia State University	SAMN06215604	GCA_001995155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/995/155/GCA_001995155.1_ASM199515v1	-	VPI 10463
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.9299	39.1	-	JZIY02	153	3856	3652	3/6/15	3/18/17	Contig	JCVI	SAMN03084866	GCA_000949065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/065/GCA_000949065.2_ASM94906v2	-	UH592_583
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.6785	66.2	-	LRYR01	81	6399	6161	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436460	GCA_001554575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/575/GCA_001554575.1_ASM155457v1	27103710	AU6462
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05155	39.6	-	COCN02	165	2226	2027	3/22/15	3/11/17	Contig	SC	SAMEA1463120	GCA_001133205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/205/GCA_001133205.2_7622_3_74	-	CH2116
Escherichia coli UMEA 3190-1	1281210	PRJNA186312	186312	Proteobacteria	Gammaproteobacteria	5.28311	50.6	-	AWCE01	31	5618	5108	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885922	GCA_000460675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/675/GCA_000460675.1_Esch_coli_UMEA_3190-1_V1	-	UMEA 3190-1
Mycobacterium tuberculosis UT0070	1408941	PRJNA223573	223573	Terrabacteria group	Actinobacteria	4.39461	65.6	-	JLPA01	9	4279	4115	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381018	GCA_000668695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/695/GCA_000668695.1_Myco_tube_UT0070_V1	-	UT0070
Listeria monocytogenes	1639	PRJNA229903	229903	Terrabacteria group	Firmicutes	2.84162	37.9	-	MJOE01	12	2856	2783	9/29/16	3/1/17	Scaffold	FDA/CFSAN	SAMN03277739	GCA_001749855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/855/GCA_001749855.1_ASM174985v1	-	NRRL B-33022
Campylobacter jejuni subsp. jejuni 305	691337	PRJNA41641	41641	Proteobacteria	delta/epsilon subdivisions	1.80827	30.4	-	ADHL01	333	2261	2138	1/3/11	1/8/14	Contig	"Faculty of Life Sciences, Department of Food Science, University of Copenhagen"	SAMN02469772	GCA_000184825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/184/825/GCA_000184825.2_ASM18482v2	21914871	305
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA260771	260771	Proteobacteria	Gammaproteobacteria	4.91481	52.1	-	JRGR01	148	5053	4819	11/17/14	2/26/17	Contig	University of Copenhagen	SAMN03031217	GCA_000784245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/245/GCA_000784245.1_ASM78424v1	25540347	S15
Staphylococcus aureus M1017	1392033	PRJNA217117	217117	Terrabacteria group	Firmicutes	2.88537	32.8	-	JCTZ01	78	3067	2933	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334641	GCA_000546425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/425/GCA_000546425.1_Stap_aure_M1017_V1	-	M1017
Staphylococcus aureus M1019	1392035	PRJNA217119	217119	Terrabacteria group	Firmicutes	2.8765	32.8	-	JCUA01	53	3050	2879	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334643	GCA_000546445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/445/GCA_000546445.1_Stap_aure_M1019_V1	-	M1019
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA260780	260780	Proteobacteria	Gammaproteobacteria	4.84745	52.1	-	JRGV01	155	4962	4739	11/17/14	2/27/17	Contig	University of Copenhagen	SAMN03031274	GCA_000784295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/295/GCA_000784295.1_ASM78429v1	-	S42
Campylobacter jejuni subsp. jejuni 327	691338	PRJNA41643	41643	Proteobacteria	delta/epsilon subdivisions	1.61861	30.5	-	ADHM01	48	1786	1711	1/3/11	1/8/14	Contig	"Faculty of Life Sciences, Department of Food Science, University of Copenhagen"	SAMN02469774	GCA_000184845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/184/845/GCA_000184845.2_ASM18484v2	21677848	327
Listeria monocytogenes	1639	PRJNA229903	229903	Terrabacteria group	Firmicutes	2.98961	37.8	-	MJQY01	17	3046	2959	9/29/16	3/1/17	Scaffold	FDA/CFSAN	SAMN03277807	GCA_001749905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/905/GCA_001749905.1_ASM174990v1	-	NRRL B-57056
Mycobacterium tuberculosis UT0071	1408942	PRJNA223574	223574	Terrabacteria group	Actinobacteria	4.46029	65.4	-	JLOZ01	6	4305	4090	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381019	GCA_000668715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/715/GCA_000668715.1_Myco_tube_UT0071_V1	-	UT0071
Escherichia coli UMEA 3193-1	1281211	PRJNA186313	186313	Proteobacteria	Gammaproteobacteria	5.30898	50.4	-	AWCF01	21	5505	5147	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885923	GCA_000460695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/695/GCA_000460695.1_Esch_coli_UMEA_3193-1_V1	-	UMEA 3193-1
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.1218	39.7	-	CMUU01	67	2276	1984	3/22/15	3/6/17	Contig	SC	SAMEA1022935	GCA_001133285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/285/GCA_001133285.1_5737_8_4	-	205
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.54538	66.3	-	LRYV01	39	6329	5996	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436478	GCA_001554585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/585/GCA_001554585.1_ASM155458v1	27103710	AU15431
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.94494	39	-	JZJB02	161	3886	3680	3/6/15	3/18/17	Contig	JCVI	SAMN03084873	GCA_000949115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/115/GCA_000949115.2_ASM94911v2	-	UH175_674
Clostridioides difficile	1496	PRJNA231221	231221	Terrabacteria group	Firmicutes	4.26385	28.6	-	NBTR01	3	4022	2601	4/10/17	4/10/17	Contig	US Food and Drug Administration 	SAMN04875595	GCA_002082985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/985/GCA_002082985.1_ASM208298v1	-	FDAARGOS_269
Klebsiella pneumoniae	573	PRJNA307517	307517	Proteobacteria	Gammaproteobacteria	5.92173	56.9	-	LXMG01	202	6135	5825	8/9/16	2/21/17	Contig	The Unniversity of Queensland	SAMN04868743	GCA_001701555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/555/GCA_001701555.1_ASM170155v1	-	23_GR_12
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.08308	64.1	-	FSLO01	17	5082	4971	12/14/16	3/21/17	Scaffold	SC	SAMEA2275857	GCA_900137975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/975/GCA_900137975.1_12163_2_89	-	1131
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.12898	64.1	-	FVPX01	26	5222	5034	3/10/17	3/18/17	Scaffold	SC	SAMEA2259648	GCA_900137985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/985/GCA_900137985.1_11893_6_10	-	843
Klebsiella pneumoniae	573	PRJNA307517	307517	Proteobacteria	Gammaproteobacteria	5.6575	57.1	-	LXMP01	134	5807	5543	8/9/16	2/21/17	Contig	The Unniversity of Queensland	SAMN04868734	GCA_001701815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/815/GCA_001701815.1_ASM170181v1	-	14_GR_14
Clostridioides difficile	1496	PRJNA340238	340238	Terrabacteria group	Firmicutes	5.06423	29.6	-	MPEQ01	648	4640	4498	9/14/17	9/14/17	Contig	Ann & Robert H. Lurie Children's Hospital of Chicago	SAMN05710919	GCA_002301955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/301/955/GCA_002301955.1_ASM230195v1	-	6636-R/ST48
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.76382	38.9	-	JZJE02	126	3571	3421	3/6/15	3/18/17	Contig	JCVI	SAMN03084867	GCA_000949165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/165/GCA_000949165.2_ASM94916v2	-	UH592_595
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.50805	66.2	-	LRYS01	44	6329	6043	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436475	GCA_001554615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/615/GCA_001554615.1_ASM155461v1	27103710	AU13213
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05549	39.6	-	COAY02	102	2239	2017	3/22/15	3/6/17	Contig	SC	SAMEA1463077	GCA_001133365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/365/GCA_001133365.2_7622_2_28	-	BR1084
Escherichia coli UMEA 3199-1	1281212	PRJNA186314	186314	Proteobacteria	Gammaproteobacteria	4.91614	50.9	-	AWCG01	6	5075	4744	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885924	GCA_000460715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/715/GCA_000460715.1_Esch_coli_UMEA_3199-1_V1	-	UMEA 3199-1
Mycobacterium tuberculosis UT0077	1408944	PRJNA223576	223576	Terrabacteria group	Actinobacteria	4.42201	65.5	-	JLOX01	4	4304	4116	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381021	GCA_000668735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/735/GCA_000668735.1_Myco_tube_UT0077_V1	-	UT0077
Listeria monocytogenes	1639	PRJNA229903	229903	Terrabacteria group	Firmicutes	2.84477	38.1	-	MJQZ01	15	2862	2780	9/29/16	3/1/17	Scaffold	FDA/CFSAN	SAMN03277808	GCA_001749925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/925/GCA_001749925.1_ASM174992v1	-	NRRL B-57063
Campylobacter jejuni subsp. jejuni ATCC 33560	889247	PRJNA84201	84201	Proteobacteria	delta/epsilon subdivisions	1.73219	30.2	-	AIJN01	43	-	-	3/7/12	1/8/14	Contig	University of Tennessee	SAMN02471203	GCA_000251165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/165/GCA_000251165.2_ASM25116v2	23278903	ATCC 33560
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA260781	260781	Proteobacteria	Gammaproteobacteria	4.82311	52.1	-	JRGW01	140	4934	4717	11/17/14	2/27/17	Contig	University of Copenhagen	SAMN03031275	GCA_000784315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/315/GCA_000784315.1_ASM78431v1	-	S46
Staphylococcus aureus M1021	1392036	PRJNA217120	217120	Terrabacteria group	Firmicutes	2.89609	32.9	-	JCUB01	25	3049	2886	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334644	GCA_000546465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/465/GCA_000546465.1_Stap_aure_M1021_V1	-	M1021
Staphylococcus aureus M1022	1392037	PRJNA217121	217121	Terrabacteria group	Firmicutes	2.82734	32.8	-	JCUC01	60	2970	2801	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334645	GCA_000546485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/485/GCA_000546485.1_Stap_aure_M1022_V1	-	M1022
Salmonella enterica subsp. enterica serovar Typhimurium str. 86-0368	1124970	PRJNA78369	78369	Proteobacteria	Gammaproteobacteria	4.97476	52.2	-	JTED01	69	5117	4879	11/21/14	2/26/17	Contig	FDA	SAMN02664993	GCA_000786025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/025/GCA_000786025.1_CFSAN001197_01.0	-	86-0368
Campylobacter jejuni X	1381117	PRJNA213994	213994	Proteobacteria	delta/epsilon subdivisions	1.73122	30.5	-	AVFM02	85	1800	1513	9/13/13	3/17/14	Contig	Kingston Uniiversity	SAMN02298816	GCA_000466925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/925/GCA_000466925.2_sequence.fsa	-	X
Listeria monocytogenes	1639	PRJNA229903	229903	Terrabacteria group	Firmicutes	3.06129	37.9	-	MJRB01	19	3134	3043	9/29/16	3/1/17	Scaffold	FDA/CFSAN	SAMN03277811	GCA_001749945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/945/GCA_001749945.1_ASM174994v1	-	NRRL B-57115
Mycobacterium tuberculosis UT0079	1408945	PRJNA223577	223577	Terrabacteria group	Actinobacteria	4.40092	65.6	-	JLOW01	3	4264	4082	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381022	GCA_000668755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/755/GCA_000668755.1_Myco_tube_UT0079_V1	-	UT0079
Escherichia coli UMEA 3200-1	1281213	PRJNA186315	186315	Proteobacteria	Gammaproteobacteria	5.4327	50.6	-	AWCH01	12	5505	5202	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885925	GCA_000460735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/735/GCA_000460735.1_Esch_coli_UMEA_3200-1_V1	-	UMEA 3200-1
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08415	39.7	-	CKSN01	53	2298	2084	3/21/15	3/10/17	Contig	SC	SAMEA1025348	GCA_001133385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/385/GCA_001133385.1_6807_3_13	-	SMRU1621
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.49923	66.2	-	LRYT01	33	6323	6039	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436476	GCA_001554625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/625/GCA_001554625.1_ASM155462v1	27103710	AU16960
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	4.14842	39	-	JZJF02	199	4076	3912	3/6/15	3/18/17	Contig	JCVI	SAMN03084811	GCA_000949175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/175/GCA_000949175.2_ASM94917v2	-	UH475_361
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.42714	29.6	-	CZXO01	3263	-	-	3/31/16	3/31/16	Contig	UNIVERSITE LAVAL	SAMEA3664003	GCA_900008295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/295/GCA_900008295.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae	573	PRJNA307517	307517	Proteobacteria	Gammaproteobacteria	5.78859	56.9	-	LXMN01	117	5921	5645	8/9/16	2/21/17	Contig	The Unniversity of Queensland	SAMN04868736	GCA_001701835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/835/GCA_001701835.1_ASM170183v1	-	16_GR_13
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.04928	64.1	-	FVQB01	19	5058	4946	3/10/17	3/18/17	Scaffold	SC	SAMEA2259649	GCA_900137995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/995/GCA_900137995.1_11893_6_11	-	844
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.27803	64.1	-	FVQF01	21	5370	5237	3/10/17	3/18/17	Scaffold	SC	SAMEA2275871	GCA_900138015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/015/GCA_900138015.1_12045_8_34	-	1145
Klebsiella pneumoniae	573	PRJNA307517	307517	Proteobacteria	Gammaproteobacteria	5.61181	57.1	-	LXMJ01	97	5717	5476	8/9/16	2/21/17	Contig	The Unniversity of Queensland	SAMN04868740	GCA_001701845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/845/GCA_001701845.1_ASM170184v1	-	20_GR_12
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.25963	29.2	-	FAIA01	2373	-	-	3/31/16	3/31/16	Contig	UNIVERSITE LAVAL	SAMEA3664290	GCA_900008505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/505/GCA_900008505.1_Peptoclostridium_difficile	-	-
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.73577	39	-	JZJD02	205	3563	3399	3/6/15	3/18/17	Contig	JCVI	SAMN03084868	GCA_000949185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/185/GCA_000949185.2_ASM94918v2	-	UH592_599
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.36625	66.5	-	LRYW01	95	6095	5879	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436479	GCA_001554655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/655/GCA_001554655.1_ASM155465v1	27103710	AU7033
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.13225	39.5	-	CKNM01	35	2335	2084	3/21/15	3/14/17	Contig	SC	SAMEA1023929	GCA_001133425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/425/GCA_001133425.1_6664_1_2	-	type strain: N
Escherichia coli UMEA 3201-1	1281214	PRJNA186316	186316	Proteobacteria	Gammaproteobacteria	5.24602	50.8	-	AWCI01	19	5442	5087	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885926	GCA_000460755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/755/GCA_000460755.1_Esch_coli_UMEA_3201-1_V1	-	UMEA 3201-1
Mycobacterium tuberculosis UT0080	1408946	PRJNA223578	223578	Terrabacteria group	Actinobacteria	4.40139	65.5	-	JLOV01	13	4283	4109	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381023	GCA_000668775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/775/GCA_000668775.1_Myco_tube_UT0080_V1	-	UT0080
Listeria monocytogenes	1639	PRJNA229903	229903	Terrabacteria group	Firmicutes	2.98724	37.8	-	MJSH01	21	3011	2938	9/29/16	3/1/17	Scaffold	FDA/CFSAN	SAMN03277809	GCA_001749965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/965/GCA_001749965.1_ASM174996v1	-	NRRL B-57066
Campylobacter jejuni subsp. jejuni 81-176-DRH212	1436884	PRJNA230832	230832	Proteobacteria	delta/epsilon subdivisions	1.4124	30.3767	plasmid pVir:AZNT01000024.1	AZNT01	24	1605	1336	12/18/13	2/28/14	Contig	University of Michigan	SAMN02471882	GCA_000509875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/509/875/GCA_000509875.1_DRH212	24503981	81-176-DRH212
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.87158	51.9	-	JWRB01	52	4980	4725	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079666	GCA_000806475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/475/GCA_000806475.1_CFSAN024721_01.0	-	CFSAN024721
Staphylococcus aureus M1023	1392038	PRJNA217122	217122	Terrabacteria group	Firmicutes	2.91527	32.8	-	JCUD01	57	3090	2907	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334646	GCA_000546505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/505/GCA_000546505.1_Stap_aure_M1023_V1	-	M1023
Staphylococcus aureus M1025	1392040	PRJNA217124	217124	Terrabacteria group	Firmicutes	2.92666	32.9	-	JCUE01	89	3111	2906	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334648	GCA_000546525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/525/GCA_000546525.1_Stap_aure_M1025_V1	-	M1025
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.75957	52	-	JWQY01	92	4813	4542	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079669	GCA_000806505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/505/GCA_000806505.1_CFSAN024724_01.0	-	CFSAN024724
Campylobacter jejuni subsp. jejuni 81-176-UMCW9	1437113	PRJNA230836	230836	Proteobacteria	delta/epsilon subdivisions	1.66253	30.5	-	AZQV01	38	1808	1637	12/23/13	2/28/14	Contig	University of Michigan	SAMN02597463	GCA_000511815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/815/GCA_000511815.1_UMCW9	24503981	81-176-UMCW9
Listeria monocytogenes	1639	PRJNA229903	229903	Terrabacteria group	Firmicutes	2.87074	38.1	-	MJRA01	6	2893	2807	9/29/16	3/1/17	Scaffold	FDA/CFSAN	SAMN03277810	GCA_001749985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/985/GCA_001749985.1_ASM174998v1	-	NRRL B-57109
Mycobacterium tuberculosis UT0082	1408947	PRJNA223579	223579	Terrabacteria group	Actinobacteria	4.40719	65.6	-	JLOU01	9	4294	4126	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381024	GCA_000668795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/795/GCA_000668795.1_Myco_tube_UT0082_V1	-	UT0082
Escherichia coli UMEA 3203-1	1281215	PRJNA186317	186317	Proteobacteria	Gammaproteobacteria	5.32895	50.5	-	AWCJ01	20	5602	5274	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885927	GCA_000460775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/775/GCA_000460775.1_Esch_coli_UMEA_3203-1_V1	-	UMEA 3203-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.98734	39.8	-	COEP02	138	2121	1940	3/23/15	3/11/17	Contig	SC	SAMEA1463124	GCA_001133485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/485/GCA_001133485.2_7622_5_53	-	MD5042
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.35332	66.5	-	LRYX01	55	6060	5874	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436480	GCA_001554665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/665/GCA_001554665.1_ASM155466v1	27103710	AU10583
Acinetobacter baumannii	470	PRJNA262565	262565	Proteobacteria	Gammaproteobacteria	3.87391	38.8	-	JZJG02	116	3741	3616	3/6/15	3/18/17	Contig	JCVI	SAMN03084796	GCA_000949195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/195/GCA_000949195.2_ASM94919v2	-	UH514_289
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.55788	29.4	-	FANU01	2480	-	-	3/31/16	3/31/16	Contig	UNIVERSITE LAVAL	SAMEA3664439	GCA_900008825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/825/GCA_900008825.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae	573	PRJNA307517	307517	Proteobacteria	Gammaproteobacteria	5.86087	57.1	-	LXMR01	98	5961	5699	8/9/16	2/22/17	Contig	The Unniversity of Queensland	SAMN04868732	GCA_001701895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/895/GCA_001701895.1_ASM170189v1	-	12_BR_13
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.97467	64.1	-	FSLT01	20	4953	4797	12/14/16	3/21/17	Scaffold	SC	SAMEA2259640	GCA_900138025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/025/GCA_900138025.1_11893_6_2	-	835
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.30578	64.1	-	FVQG01	19	5401	5272	3/10/17	3/18/17	Scaffold	SC	SAMEA2275876	GCA_900138035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/035/GCA_900138035.1_12045_8_35	-	1150
Klebsiella pneumoniae	573	PRJNA307517	307517	Proteobacteria	Gammaproteobacteria	5.56164	57.3	-	LXMS01	96	5668	5397	8/9/16	2/21/17	Contig	The Unniversity of Queensland	SAMN04868731	GCA_001701915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/915/GCA_001701915.1_ASM170191v1	-	11_BR_13
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.57565	29.9	-	FABT01	4222	-	-	3/31/16	3/31/16	Contig	UNIVERSITE LAVAL	SAMEA3664126	GCA_900009815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/815/GCA_900009815.1_Peptoclostridium_difficile	-	-
Acinetobacter baumannii	470	PRJNA268567	268567	Proteobacteria	Gammaproteobacteria	4.12886	38.9	-	JXOC01	22	3996	3821	3/11/15	3/17/17	Contig	Affiliated Wuxi Peoples Hospital of Nanjing Medical University	SAMN03222644	GCA_000951165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/951/165/GCA_000951165.1_ASM95116v1	-	WA2859
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.47585	66.3	-	LRZC01	56	6232	5914	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436485	GCA_001554695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/695/GCA_001554695.1_ASM155469v1	27103710	AU10409
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.1498	39.5	-	CMFF01	76	2387	2160	3/21/15	3/10/17	Contig	SC	SAMEA1028608	GCA_001133505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/505/GCA_001133505.1_7011_5_9	-	SMRU2793
Escherichia coli UMEA 3206-1	1281216	PRJNA186318	186318	Proteobacteria	Gammaproteobacteria	5.23636	50.5	-	AWCK01	12	5426	5081	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885928	GCA_000460795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/795/GCA_000460795.1_Esch_coli_UMEA_3206-1_V1	-	UMEA 3206-1
Mycobacterium tuberculosis UT0083	1408948	PRJNA223580	223580	Terrabacteria group	Actinobacteria	4.40383	65.6	-	JLOT01	5	4292	4124	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381025	GCA_000668815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/815/GCA_000668815.1_Myco_tube_UT0083_V1	-	UT0083
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.0121	37.9	-	MJSI01	30	3082	2975	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357032	GCA_001751405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/405/GCA_001751405.1_ASM175140v1	-	CFSAN002256
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	1.60671	30.8	-	CZIJ01	766	-	-	10/11/15	10/11/15	Contig	LSHTM	SAMEA3556512	GCA_001406915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/406/915/GCA_001406915.1_9_S8	-	Campylobacter jejuni
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.67809	52.2	-	JWQX01	58	4779	4513	12/22/14	2/26/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079670	GCA_000806525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/525/GCA_000806525.1_CFSAN024725_01.0	-	CFSAN024725
Staphylococcus aureus M1026	1392041	PRJNA217125	217125	Terrabacteria group	Firmicutes	2.90308	32.9	-	JCUF01	74	3094	2906	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334649	GCA_000546545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/545/GCA_000546545.1_Stap_aure_M1026_V1	-	M1026
Staphylococcus aureus M1027	1392042	PRJNA217126	217126	Terrabacteria group	Firmicutes	2.84898	32.8	-	JCUG01	47	3010	2835	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334650	GCA_000546565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/565/GCA_000546565.1_Stap_aure_M1027_V1	-	M1027
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74438	52.1	-	JWQV01	55	4806	4565	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079702	GCA_000806545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/545/GCA_000806545.1_CFSAN024757_02.0	-	CFSAN024757
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	4.30156	36.9	-	CZIZ01	1102	-	-	10/11/15	10/11/15	Contig	LSHTM	SAMEA3556522	GCA_001407155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/155/GCA_001407155.1_19_S18	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.99116	37.8	-	MJSK01	22	3066	2984	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357034	GCA_001751425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/425/GCA_001751425.1_ASM175142v1	-	BCW_2354
Mycobacterium tuberculosis UT0084	1408949	PRJNA223581	223581	Terrabacteria group	Actinobacteria	4.39762	65.6	-	JLOS01	4	4292	4097	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381026	GCA_000668835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/835/GCA_000668835.1_Myco_tube_UT0084_V1	-	UT0084
Escherichia coli UMEA 3208-1	1281217	PRJNA186319	186319	Proteobacteria	Gammaproteobacteria	5.22682	50.6	-	AWCL01	11	5393	5027	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885929	GCA_000460815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/815/GCA_000460815.1_Esch_coli_UMEA_3208-1_V1	-	UMEA 3208-1
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	1.97178	39.7	-	CKYL01	46	2169	1967	3/21/15	3/10/17	Contig	SC	SAMEA1025328	GCA_001133665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/665/GCA_001133665.1_6830_3_3	-	SMRU1635
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.58861	66.2	-	LRZB01	53	6349	6023	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436484	GCA_001554705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/705/GCA_001554705.1_ASM155470v1	27103710	AU10272
Acinetobacter baumannii	470	PRJNA279414	279414	Proteobacteria	Gammaproteobacteria	3.93708	38.8	-	LANH01	107	3769	3599	3/30/15	3/17/17	Contig	University of Concepcion	SAMN03447203	GCA_000966305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/305/GCA_000966305.1_ASM96630v1	26139713	Ab5
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	5.18691	31	-	FAMN01	4741	-	-	3/31/16	3/31/16	Contig	UNIVERSITE LAVAL	SAMEA3664403	GCA_900010395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/395/GCA_900010395.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae	573	PRJNA307517	307517	Proteobacteria	Gammaproteobacteria	5.66514	57.1	-	LXMU01	129	5850	5583	8/9/16	2/21/17	Contig	The Unniversity of Queensland	SAMN04868729	GCA_001701925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/925/GCA_001701925.1_ASM170192v1	-	9_GR_12
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.07947	64	-	FVQC01	13	5143	4974	3/10/17	3/18/17	Scaffold	SC	SAMEA2275870	GCA_900138045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/045/GCA_900138045.1_12045_8_33	-	1144
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.27774	64	-	FVQO01	25	5413	5189	3/10/17	3/18/17	Scaffold	SC	SAMEA2275883	GCA_900138055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/055/GCA_900138055.1_12045_8_37	-	1157
Klebsiella pneumoniae	573	PRJNA307517	307517	Proteobacteria	Gammaproteobacteria	5.89797	56.8	-	LXMX01	139	6108	5751	8/9/16	2/21/17	Contig	The Unniversity of Queensland	SAMN04868726	GCA_001701935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/935/GCA_001701935.1_ASM170193v1	-	6_GR_12
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	5.04417	29.8	-	FALN01	2990	-	-	3/31/16	3/31/16	Contig	UNIVERSITE LAVAL	SAMEA3664382	GCA_900010955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/955/GCA_900010955.1_Peptoclostridium_difficile	-	-
Acinetobacter baumannii	470	PRJNA255268	255268	Proteobacteria	Gammaproteobacteria	4.13074	38.9	-	LAKP01	126	4050	3862	3/31/15	3/17/17	Contig	The University of Queensland	SAMN03418028	GCA_000966505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/505/GCA_000966505.1_ASM96650v1	-	M2
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.58021	66.2	-	LRZD01	56	6347	6024	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436486	GCA_001554735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/735/GCA_001554735.1_ASM155473v1	27103710	AU10410
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12526	39.6	-	CNSM02	213	2308	2104	3/23/15	3/5/17	Contig	SC	SAMEA1032429	GCA_001133725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/725/GCA_001133725.2_6999_3_18	-	62031
Escherichia coli UMEA 3212-1	1281218	PRJNA186320	186320	Proteobacteria	Gammaproteobacteria	5.37808	50.7	-	AWCM01	21	5666	5164	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885930	GCA_000460835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/835/GCA_000460835.1_Esch_coli_UMEA_3212-1_V1	-	UMEA 3212-1
Mycobacterium tuberculosis UT0085	1408950	PRJNA223582	223582	Terrabacteria group	Actinobacteria	4.3938	65.5	-	JLOR01	14	4277	4075	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381027	GCA_000668855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/855/GCA_000668855.1_Myco_tube_UT0085_V1	-	UT0085
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.05228	37.8	-	MJSL01	31	3140	3047	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357035	GCA_001751435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/435/GCA_001751435.1_ASM175143v1	-	BCW_2355
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	4.13204	37.2	-	CZJA01	2811	-	-	10/11/15	10/11/15	Contig	LSHTM	SAMEA3556515	GCA_001407175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/175/GCA_001407175.1_12_S11	-	Campylobacter jejuni
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74702	52.1	-	JWQU01	64	4809	4564	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079703	GCA_000806565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/565/GCA_000806565.1_CFSAN024758_02.0	-	CFSAN024758
Staphylococcus aureus M1030	1392045	PRJNA217129	217129	Terrabacteria group	Firmicutes	2.86668	32.8	-	JCUH01	48	3011	2859	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334653	GCA_000546585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/585/GCA_000546585.1_Stap_aure_M1030_V1	-	M1030
Staphylococcus aureus M1031	1392046	PRJNA217130	217130	Terrabacteria group	Firmicutes	2.87602	32.9	-	JCUI01	60	3047	2858	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334654	GCA_000546605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/605/GCA_000546605.1_Stap_aure_M1031_V1	-	M1031
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.84732	52.1	-	JWQS01	48	4944	4716	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079705	GCA_000806585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/585/GCA_000806585.1_CFSAN024760_02.0	-	CFSAN024760
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	9.12363	54	-	CZJQ01	2220	-	-	10/11/15	10/11/15	Contig	LSHTM	SAMEA3556557	GCA_001407215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/215/GCA_001407215.1_55_S53	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.96437	37.9	-	MJSM01	20	3042	2949	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357036	GCA_001751445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/445/GCA_001751445.1_ASM175144v1	-	BCW_2356
Mycobacterium tuberculosis UT0087	1408951	PRJNA223583	223583	Terrabacteria group	Actinobacteria	4.41949	65.5	-	JLOQ01	32	4299	4089	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381028	GCA_000668875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/875/GCA_000668875.1_Myco_tube_UT0087_V1	-	UT0087
Escherichia coli UMEA 3215-1	1281219	PRJNA186321	186321	Proteobacteria	Gammaproteobacteria	5.42016	50.6	-	AWCN01	10	5619	5238	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885931	GCA_000460855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/855/GCA_000460855.1_Esch_coli_UMEA_3215-1_V1	-	UMEA 3215-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.99809	39.7	-	CNYD02	180	2130	1951	3/23/15	3/11/17	Contig	SC	SAMEA1463293	GCA_001133865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/865/GCA_001133865.2_7553_4_25	-	ND6153
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.57205	66.2	-	LRZF01	54	6350	6018	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436488	GCA_001554745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/745/GCA_001554745.1_ASM155474v1	27103710	AU16821
Acinetobacter baumannii	470	PRJNA255268	255268	Proteobacteria	Gammaproteobacteria	3.94441	39	-	LAKR01	103	3795	3664	3/31/15	3/17/17	Contig	The University of Queensland	SAMN03418026	GCA_000966515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/515/GCA_000966515.1_ASM96651v1	-	J2770
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.34113	29.6	-	FANE01	2616	-	-	3/31/16	3/31/16	Contig	UNIVERSITE LAVAL	SAMEA3664427	GCA_900010975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/975/GCA_900010975.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae	573	PRJNA307517	307517	Proteobacteria	Gammaproteobacteria	5.70319	57.1	-	LXMT01	108	5838	5578	8/9/16	2/21/17	Contig	The Unniversity of Queensland	SAMN04868730	GCA_001701975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/975/GCA_001701975.1_ASM170197v1	-	10_GR_13
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.37095	64.1	-	FVQD01	53	5473	5263	3/10/17	3/18/17	Scaffold	SC	SAMEA2259709	GCA_900138065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/065/GCA_900138065.1_11893_6_60	-	904
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.11238	64.2	-	FVQQ01	31	5123	4968	3/10/17	3/18/17	Scaffold	SC	SAMEA2275884	GCA_900138075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/075/GCA_900138075.1_12045_8_38	-	1158
Klebsiella pneumoniae	573	PRJNA307517	307517	Proteobacteria	Gammaproteobacteria	5.88987	56.8	-	LXMY01	138	6098	5750	8/9/16	2/21/17	Contig	The Unniversity of Queensland	SAMN04868725	GCA_001701985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/985/GCA_001701985.1_ASM170198v1	-	5_GR_13
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.33191	29.2	-	FAJT01	2340	-	-	3/31/16	3/31/16	Contig	UNIVERSITE LAVAL	SAMEA3664335	GCA_900011155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/155/GCA_900011155.1_Peptoclostridium_difficile	-	-
Acinetobacter baumannii	470	PRJNA255268	255268	Proteobacteria	Gammaproteobacteria	3.87101	38.9	-	LAIL01	94	3712	3578	4/6/15	3/17/17	Contig	The University of Queensland	SAMN03418027	GCA_000969285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/285/GCA_000969285.1_ASM96928v1	-	M1
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.29336	66.4	-	LRZG01	56	6041	5846	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436489	GCA_001554775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/775/GCA_001554775.1_ASM155477v1	27103710	AU8251
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.17384	39.5	-	COAT02	262	2330	2111	3/23/15	3/11/17	Contig	SC	SAMEA1463136	GCA_001133885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/885/GCA_001133885.2_7622_2_21	-	BR1065
Escherichia coli UMEA 3216-1	1281220	PRJNA186322	186322	Proteobacteria	Gammaproteobacteria	5.03066	50.6	-	AWCO01	13	5119	4786	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885932	GCA_000460875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/875/GCA_000460875.1_Esch_coli_UMEA_3216-1_V1	-	UMEA 3216-1
Mycobacterium tuberculosis UT0088	1408952	PRJNA223584	223584	Terrabacteria group	Actinobacteria	4.3925	65.4	-	JLOP01	16	4304	4074	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381029	GCA_000668895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/895/GCA_000668895.1_Myco_tube_UT0088_V1	-	UT0088
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.88847	37.9	-	MJSJ01	20	2908	2831	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357033	GCA_001751455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/455/GCA_001751455.1_ASM175145v1	-	CFSAN002257
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	4.35099	36.9	-	CZIN01	838	-	-	10/11/15	10/11/15	Contig	LSHTM	SAMEA3556518	GCA_001407395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/395/GCA_001407395.1_15_S14	-	Campylobacter jejuni
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.7449	52.1	-	JWQR01	52	4810	4573	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079706	GCA_000806605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/605/GCA_000806605.1_CFSAN024761_02.0	-	CFSAN024761
Staphylococcus aureus M1033	1392047	PRJNA217131	217131	Terrabacteria group	Firmicutes	2.90224	32.7	-	JCUJ01	87	3122	2939	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02334655	GCA_000546625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/625/GCA_000546625.1_Stap_aure_M1033_V1	-	M1033
Staphylococcus aureus M1035	1392048	PRJNA217132	217132	Terrabacteria group	Firmicutes	2.85339	32.7	-	JCUK01	59	2989	2872	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334656	GCA_000546645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/645/GCA_000546645.1_Stap_aure_M1035_V1	-	M1035
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73519	52.1	-	JWQO01	60	4839	4616	12/22/14	2/26/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079709	GCA_000806625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/625/GCA_000806625.1_CFSAN024764_02.0	-	CFSAN024764
Campylobacter jejuni	197	PRJEB10936	298439	Proteobacteria	delta/epsilon subdivisions	4.38242	37	-	CZJP01	669	-	-	10/11/15	10/11/15	Contig	LSHTM	SAMEA3556561	GCA_001407875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/407/875/GCA_001407875.1_59_S57	-	Campylobacter jejuni
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.93986	37.9	-	MJSN01	23	2982	2896	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357037	GCA_001751505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/505/GCA_001751505.1_ASM175150v1	-	BCW_2357
Mycobacterium tuberculosis UT0089	1408953	PRJNA223585	223585	Terrabacteria group	Actinobacteria	4.40201	65.6	-	JLOO01	6	4283	4104	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381030	GCA_000668915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/915/GCA_000668915.1_Myco_tube_UT0089_V1	-	UT0089
Escherichia coli UMEA 3217-1	1281221	PRJNA186323	186323	Proteobacteria	Gammaproteobacteria	5.05304	50.5	-	AWCP01	7	5086	4757	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885933	GCA_000460895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/895/GCA_000460895.1_Esch_coli_UMEA_3217-1_V1	-	UMEA 3217-1
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.15484	39.5	-	CMSU01	40	2389	2153	3/23/15	3/10/17	Contig	SC	SAMEA2062396	GCA_001133905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/905/GCA_001133905.1_9803_8_77	-	23F
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.32759	66.4	-	LRZH01	49	6060	5876	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436490	GCA_001554785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/785/GCA_001554785.1_ASM155478v1	27103710	AU12528
Acinetobacter baumannii	470	PRJNA255268	255268	Proteobacteria	Gammaproteobacteria	3.71048	38.7	-	LAIM01	90	3629	3497	4/6/15	3/17/17	Contig	The University of Queensland	SAMN03437980	GCA_000969295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/295/GCA_000969295.1_ASM96929v1	-	S10
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.34615	29.3	-	CZXI01	2593	-	-	3/31/16	3/31/16	Contig	UNIVERSITE LAVAL	SAMEA3663993	GCA_900011315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/315/GCA_900011315.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae	573	PRJNA307517	307517	Proteobacteria	Gammaproteobacteria	5.92685	56.9	-	LXNA01	134	6129	5871	8/9/16	2/21/17	Contig	The Unniversity of Queensland	SAMN04868723	GCA_001702005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/702/005/GCA_001702005.1_ASM170200v1	-	3_GR_13
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18354	64.1	-	FVQE01	9	5297	5113	3/10/17	3/18/17	Scaffold	SC	SAMEA2259647	GCA_900138085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/085/GCA_900138085.1_11893_6_9	-	842
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.11462	64.2	-	FWCX01	31	5122	4964	3/16/17	3/24/17	Scaffold	SC	SAMEA2275880	GCA_900138095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/095/GCA_900138095.1_12045_8_36	-	1154
Klebsiella pneumoniae	573	PRJNA307517	307517	Proteobacteria	Gammaproteobacteria	5.88372	57	-	LXMZ01	159	6110	5817	8/9/16	2/21/17	Contig	The Unniversity of Queensland	SAMN04868724	GCA_001702035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/702/035/GCA_001702035.1_ASM170203v1	-	4_GR_12
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.57946	29.5	-	CZYU01	4524	-	-	3/31/16	3/31/16	Contig	UNIVERSITE LAVAL	SAMEA3664048	GCA_900011405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/405/GCA_900011405.1_Peptoclostridium_difficile	-	-
Acinetobacter baumannii	470	PRJNA255268	255268	Proteobacteria	Gammaproteobacteria	4.05493	38.9	-	LAIN01	80	3945	3814	4/6/15	3/17/17	Contig	The University of Queensland	SAMN03418030	GCA_000969365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/365/GCA_000969365.1_ASM96936v1	-	S19
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.33687	66.4	-	LRZI01	54	6060	5870	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436491	GCA_001554805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/805/GCA_001554805.1_ASM155480v1	27103710	AU17907
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.00276	39.8	-	CKPD01	57	2171	1983	3/21/15	3/10/17	Contig	SC	SAMEA1024568	GCA_001133945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/945/GCA_001133945.1_6680_5_11	-	SMRU923
Escherichia coli UMEA 3220-1	1281222	PRJNA186324	186324	Proteobacteria	Gammaproteobacteria	5.15801	50.5	-	AWCQ01	16	5290	4933	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885934	GCA_000460915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/915/GCA_000460915.1_Esch_coli_UMEA_3220-1_V1	-	UMEA 3220-1
Mycobacterium tuberculosis UT0090	1408954	PRJNA223586	223586	Terrabacteria group	Actinobacteria	4.40841	65.6	-	JLON01	5	4281	4112	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381031	GCA_000668935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/935/GCA_000668935.1_Myco_tube_UT0090_V1	-	UT0090
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.9165	37.9	-	MJSO01	18	2941	2866	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357038	GCA_001751525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/525/GCA_001751525.1_ASM175152v1	-	CFSAN002263
Campylobacter jejuni subsp. jejuni	32022	PRJNA231221	231221	Proteobacteria	delta/epsilon subdivisions	1.80394	30.6	-	NBTT01	2	1951	820	4/10/17	4/10/17	Contig	US Food and Drug Administration 	SAMN04875590	GCA_002082995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/995/GCA_002082995.1_ASM208299v1	-	FDAARGOS_264
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.657	52.2	-	JWQN01	38	4763	4496	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079710	GCA_000806645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/645/GCA_000806645.1_CFSAN024765_02.0	-	CFSAN024765
Staphylococcus aureus M1041	1392050	PRJNA217134	217134	Terrabacteria group	Firmicutes	2.87944	32.8	-	JCUL01	51	3043	2862	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334658	GCA_000546665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/665/GCA_000546665.1_Stap_aure_M1041_V1	-	M1041
Staphylococcus aureus M1043	1392051	PRJNA217135	217135	Terrabacteria group	Firmicutes	2.87353	32.8	-	JCUM01	35	3031	2861	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334659	GCA_000546685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/685/GCA_000546685.1_Stap_aure_M1043_V1	-	M1043
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.87246	52.1	-	JWQL01	37	5019	4704	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079713	GCA_000806665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/665/GCA_000806665.1_CFSAN024768_02.0	-	CFSAN024768
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.6441	30.7	-	NFQR01	1724	-	-	6/8/17	6/8/17	Contig	Swansea University	SAMN06888369	GCA_002177195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/195/GCA_002177195.1_ASM217719v1	28493321	RM3417
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.94501	37.8	-	MJSP01	16	2989	2910	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357039	GCA_001751535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/535/GCA_001751535.1_ASM175153v1	-	CFSAN002265
Mycobacterium tuberculosis UT0091	1408955	PRJNA223587	223587	Terrabacteria group	Actinobacteria	4.42309	65.4	-	JLOM01	24	4302	4094	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381032	GCA_000668955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/955/GCA_000668955.1_Myco_tube_UT0091_V1	-	UT0091
Escherichia coli UMEA 3221-1	1281223	PRJNA186325	186325	Proteobacteria	Gammaproteobacteria	5.24634	50.3	-	AWCR01	11	5291	4929	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885935	GCA_000460935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/935/GCA_000460935.1_Esch_coli_UMEA_3221-1_V1	-	UMEA 3221-1
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.14678	39.6	-	CMQP01	101	2374	2136	3/23/15	3/10/17	Contig	SC	SAMEA2062156	GCA_001134025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/025/GCA_001134025.1_9803_8_21	-	6A
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.32827	66.5	-	LRZJ01	39	5985	5734	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436492	GCA_001554825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/825/GCA_001554825.1_ASM155482v1	27103710	AU9017
Acinetobacter baumannii	470	PRJNA255268	255268	Proteobacteria	Gammaproteobacteria	4.02184	38.9	-	LAIO01	66	3901	3773	4/6/15	3/17/17	Contig	The University of Queensland	SAMN03418031	GCA_000969385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/385/GCA_000969385.1_ASM96938v1	-	S36
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.36598	28.9	-	CZYV01	2345	-	-	3/31/16	3/31/16	Contig	UNIVERSITE LAVAL	SAMEA3664053	GCA_900011825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/825/GCA_900011825.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae	573	PRJNA307517	307517	Proteobacteria	Gammaproteobacteria	5.90841	56.9	-	LXNB01	184	6116	5827	8/9/16	2/21/17	Contig	The Unniversity of Queensland	SAMN04868722	GCA_001702045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/702/045/GCA_001702045.1_ASM170204v1	-	2_GR_12
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16766	64.2	-	FVQJ01	35	5197	5035	3/10/17	3/18/17	Scaffold	SC	SAMEA2275886	GCA_900138105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/105/GCA_900138105.1_12045_8_39	-	1160
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.044	64.1	-	FVQN01	11	5047	4928	3/10/17	3/18/17	Scaffold	SC	SAMEA2275885	GCA_900138115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/115/GCA_900138115.1_12045_8_47	-	1159
Klebsiella pneumoniae	573	PRJNA336156	336156	Proteobacteria	Gammaproteobacteria	5.80051	56.6	-	MCGW01	72	5877	5522	8/10/16	2/21/17	Contig	IOC- FIOCRUZ	SAMN05505089	GCA_001702405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/702/405/GCA_001702405.1_ASM170240v1	-	CCBH15949
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.328	29.5	-	CZZN01	2459	-	-	3/31/16	3/31/16	Contig	UNIVERSITE LAVAL	SAMEA3664068	GCA_900011885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/885/GCA_900011885.1_Peptoclostridium_difficile	-	-
Acinetobacter baumannii	470	PRJNA255268	255268	Proteobacteria	Gammaproteobacteria	3.43693	38.7	-	LAIZ01	67	3355	3247	4/6/15	3/17/17	Contig	The University of Queensland	SAMN03418032	GCA_000969465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/465/GCA_000969465.1_ASM96946v1	-	S46
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.32119	66.5	-	LRZK01	49	5986	5714	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436493	GCA_001554855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/855/GCA_001554855.1_ASM155485v1	27103710	AU10502
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05146	39.8	-	COCB02	143	2248	2031	3/22/15	3/11/17	Contig	SC	SAMEA1463093	GCA_001134085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/085/GCA_001134085.2_7622_3_60	-	CH2069
Escherichia coli UMEA 3222-1	1281224	PRJNA186326	186326	Proteobacteria	Gammaproteobacteria	5.39212	50.3	-	AWCS01	24	5574	5167	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885936	GCA_000460955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/955/GCA_000460955.1_Esch_coli_UMEA_3222-1_V1	-	UMEA 3222-1
Mycobacterium tuberculosis UT0092	1408956	PRJNA223588	223588	Terrabacteria group	Actinobacteria	4.42174	65.5	-	JLOL01	5	4293	4120	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381033	GCA_000668975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/975/GCA_000668975.1_Myco_tube_UT0092_V1	-	UT0092
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.00293	37.9	-	MJSQ01	29	3047	2966	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357040	GCA_001751545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/545/GCA_001751545.1_ASM175154v1	-	BCW_2362
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.51841	30.9	-	NFQO01	1565	-	-	6/8/17	6/8/17	Contig	Swansea University	SAMN06888372	GCA_002177205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/205/GCA_002177205.1_ASM217720v1	28493321	RM3413
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.87541	52.1	-	JWQK01	35	5027	4709	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079714	GCA_000806685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/685/GCA_000806685.1_CFSAN024769_02.0	-	CFSAN024769
Staphylococcus aureus M1045	1392052	PRJNA217136	217136	Terrabacteria group	Firmicutes	2.84615	32.8	-	JCUN01	37	3011	2841	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334660	GCA_000546705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/705/GCA_000546705.1_Stap_aure_M1045_V1	-	M1045
Staphylococcus aureus M1046	1392053	PRJNA217137	217137	Terrabacteria group	Firmicutes	2.89023	32.9	-	JCUO01	29	3048	2879	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334661	GCA_000546725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/725/GCA_000546725.1_Stap_aure_M1046_V1	-	M1046
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.01196	52	-	JWQJ01	49	5177	4901	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079715	GCA_000806705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/705/GCA_000806705.1_CFSAN024770_02.0	-	CFSAN024770
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.51038	30.9	-	NFQP01	1565	-	-	6/8/17	6/8/17	Contig	Swansea University	SAMN06888371	GCA_002177215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/215/GCA_002177215.1_ASM217721v1	28493321	RM3411
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.99362	37.8	-	MJSR01	28	3074	2983	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357041	GCA_001751585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/585/GCA_001751585.1_ASM175158v1	-	BCW_2363
Mycobacterium tuberculosis UT0093	1408957	PRJNA223589	223589	Terrabacteria group	Actinobacteria	4.46603	65.4	-	JLOK01	19	4332	4104	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381034	GCA_000668995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/668/995/GCA_000668995.1_Myco_tube_UT0093_V1	-	UT0093
Escherichia coli UMEA 3230-1	1281225	PRJNA186327	186327	Proteobacteria	Gammaproteobacteria	5.20574	50.4	-	AWCT01	13	5327	4956	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885937	GCA_000460975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/975/GCA_000460975.1_Esch_coli_UMEA_3230-1_V1	-	UMEA 3230-1
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08891	39.5	-	CLPZ01	89	2296	2065	3/21/15	3/4/17	Contig	SC	SAMEA1029118	GCA_001134325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/325/GCA_001134325.1_6949_4_16	-	SMRU2488
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.32079	66.5	-	LRZN01	38	5982	5713	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436496	GCA_001554875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/875/GCA_001554875.1_ASM155487v1	27103710	AU12424
Acinetobacter baumannii	470	PRJNA255268	255268	Proteobacteria	Gammaproteobacteria	3.77038	39	-	LAIY01	247	3754	3493	4/6/15	3/17/17	Contig	The University of Queensland	SAMN03418029	GCA_000969485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/485/GCA_000969485.1_ASM96948v1	-	S11
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.86757	30.2	-	CZZV01	3976	-	-	3/31/16	3/31/16	Contig	UNIVERSITE LAVAL	SAMEA3664076	GCA_900011935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/935/GCA_900011935.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA310630	310630	Proteobacteria	Gammaproteobacteria	5.4873	57.3	-	LRXK01	123	5536	5350	8/21/16	2/21/17	Contig	Columbia University Medical Center	SAMN04453063	GCA_001708165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/165/GCA_001708165.1_ASM170816v1	-	KPACU35
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.28176	63.8	-	FVQM01	31	5518	5082	3/10/17	3/18/17	Scaffold	SC	SAMEA2275887	GCA_900138125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/125/GCA_900138125.1_12045_8_40	-	1161
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21214	64	-	FVQI01	16	5262	5146	3/10/17	3/18/17	Scaffold	SC	SAMEA2275849	GCA_900138145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/145/GCA_900138145.1_12082_5_80	-	1123
Klebsiella pneumoniae	573	PRJNA336378	336378	Proteobacteria	Gammaproteobacteria	5.60889	56.9	-	MDBZ01	85	5743	5424	8/29/16	2/21/17	Contig	IOC- FIOCRUZ	SAMN05510516	GCA_001715215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/215/GCA_001715215.1_ASM171521v1	-	CCBH17440
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	6.05911	32.8	-	FACE01	20795	-	-	3/31/16	3/31/16	Contig	UNIVERSITE LAVAL	SAMEA3664107	GCA_900012085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/085/GCA_900012085.1_Peptoclostridium_difficile	-	-
Acinetobacter baumannii	470	PRJNA238593	238593	Proteobacteria	Gammaproteobacteria	3.91854	38.8	-	LAYM01	86	3780	3598	4/15/15	3/17/17	Contig	Walter Reed Army Institute of Research	SAMN02646214	GCA_000972525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/525/GCA_000972525.1_ASM97252v1	25824815	MRSN16897
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.32136	66.5	-	LRZM01	47	5990	5695	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436495	GCA_001554895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/895/GCA_001554895.1_ASM155489v1	27103710	AU11991
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00568	39.7	-	CODG02	110	2188	1986	3/23/15	3/5/17	Contig	SC	SAMEA1463156	GCA_001134465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/465/GCA_001134465.2_7622_4_11	-	LE4018
Escherichia coli UMEA 3233-1	1281226	PRJNA186328	186328	Proteobacteria	Gammaproteobacteria	5.21103	50.5	-	AWCU01	14	5386	5053	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885938	GCA_000460995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/460/995/GCA_000460995.1_Esch_coli_UMEA_3233-1_V1	-	UMEA 3233-1
Mycobacterium tuberculosis UT0094	1408958	PRJNA223590	223590	Terrabacteria group	Actinobacteria	4.39877	65.5	-	JLOJ01	6	4282	4089	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381035	GCA_000669015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/015/GCA_000669015.1_Myco_tube_UT0094_V1	-	UT0094
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.06104	37.8	-	MJSS01	39	3102	3017	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357042	GCA_001751605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/605/GCA_001751605.1_ASM175160v1	-	BCW_2364
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.61244	30.8	-	NFQS01	1698	-	-	6/8/17	6/8/17	Contig	Swansea University	SAMN06888368	GCA_002177225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/225/GCA_002177225.1_ASM217722v1	28493321	RM3412
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.09974	52	-	JWQI01	41	5252	4970	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079716	GCA_000806725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/725/GCA_000806725.1_CFSAN024771_01.0	-	CFSAN024771
Staphylococcus aureus M1048	1392055	PRJNA217139	217139	Terrabacteria group	Firmicutes	2.86728	32.8	-	JCUP01	47	3012	2849	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334663	GCA_000546745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/745/GCA_000546745.1_Stap_aure_M1048_V1	-	M1048
Staphylococcus aureus M1049	1392056	PRJNA217140	217140	Terrabacteria group	Firmicutes	2.85569	32.9	-	JCUQ01	14	2991	2830	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334664	GCA_000546765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/765/GCA_000546765.1_Stap_aure_M1049_V1	-	M1049
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.75012	52.1	-	JWQG01	35	4850	4609	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079718	GCA_000806745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/745/GCA_000806745.1_CFSAN024773_01.0	-	CFSAN024773
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.64325	30.8	-	NFQM01	1756	-	-	6/8/17	6/8/17	Contig	Swansea University	SAMN06888374	GCA_002177275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/275/GCA_002177275.1_ASM217727v1	28493321	RM1170
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.02256	37.8	-	MJST01	24	3073	2998	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357043	GCA_001751615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/615/GCA_001751615.1_ASM175161v1	-	BCW_2365
Mycobacterium tuberculosis UT0096	1408959	PRJNA223591	223591	Terrabacteria group	Actinobacteria	4.38289	65.6	-	JLOI01	65	4294	4095	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381036	GCA_000669035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/035/GCA_000669035.1_Myco_tube_UT0096_V1	-	UT0096
Escherichia coli UMEA 3240-1	1281227	PRJNA186329	186329	Proteobacteria	Gammaproteobacteria	5.18354	50.8	-	AWCV01	8	5327	4938	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885939	GCA_000461015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/015/GCA_000461015.1_Esch_coli_UMEA_3240-1_V1	-	UMEA 3240-1
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.02482	39.9	-	CMUY01	65	2159	1934	3/23/15	3/4/17	Contig	SC	SAMEA1022880	GCA_001134505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/505/GCA_001134505.1_5750_2_10	-	254
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.31922	66.5	-	LRZO01	61	5997	5688	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436497	GCA_001554915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/915/GCA_001554915.1_ASM155491v1	27103710	AU18274
Acinetobacter baumannii	470	PRJNA241454	241454	Proteobacteria	Gammaproteobacteria	3.91665	38.8	-	LAZK01	85	3788	3597	4/16/15	3/17/17	Contig	Walter Reed Army Institute of Research	SAMN02690056	GCA_000972625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/625/GCA_000972625.1_ASM97262v1	25824815	MRSN16875
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	5.01147	31	-	FABP01	5373	-	-	3/31/16	3/31/16	Contig	UNIVERSITE LAVAL	SAMEA3664115	GCA_900012135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/135/GCA_900012135.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae	573	PRJNA337953	337953	Proteobacteria	Gammaproteobacteria	5.92136	56.8	-	MCNT01	111	6175	5777	9/4/16	2/21/17	Contig	IOC- FIOCRUZ	SAMN05514347	GCA_001720345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/345/GCA_001720345.1_ASM172034v1	-	CCBH6984
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82571	64.1	-	FVQH01	9	4865	4710	3/10/17	3/18/17	Scaffold	SC	SAMEA2275866	GCA_900138155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/155/GCA_900138155.1_12082_5_84	-	1140
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82599	64.1	-	FVQP01	9	4863	4702	3/10/17	3/18/17	Scaffold	SC	SAMEA2275867	GCA_900138165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/165/GCA_900138165.1_12082_5_85	-	1141
Klebsiella pneumoniae	573	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	5.43178	57.1	-	MCNN01	68	5409	5156	9/2/16	2/21/17	Contig	SRCAMB	SAMN05413579	GCA_001720625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/625/GCA_001720625.1_ASM172062v1	-	SCPM-O-B-7846
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.46042	29.6	-	FACO01	2260	-	-	3/31/16	3/31/16	Contig	UNIVERSITE LAVAL	SAMEA3664147	GCA_900012245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/245/GCA_900012245.1_Peptoclostridium_difficile	-	-
Acinetobacter baumannii	470	PRJNA280110	280110	Proteobacteria	Gammaproteobacteria	4.10279	39.1	-	LAXF01	76	4017	3733	5/5/15	3/17/17	Contig	Instituto Oswaldo Cruz	SAMN03456260	GCA_000988155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/155/GCA_000988155.1_ASM98815v1	26132428	CCBH5233
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.23978	66.6	-	LRZR01	49	5933	5669	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436500	GCA_001554935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/935/GCA_001554935.1_ASM155493v1	27103710	AU13210
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.09566	39.5	-	CMFV01	69	2326	2105	3/21/15	3/4/17	Contig	SC	SAMEA1028843	GCA_001134685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/685/GCA_001134685.1_7011_6_5	-	SMRU2813
Escherichia coli UMEA 3244-1	1281228	PRJNA186330	186330	Proteobacteria	Gammaproteobacteria	5.06921	50.4	-	AWCW01	15	5147	4830	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885940	GCA_000461035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/035/GCA_000461035.1_Esch_coli_UMEA_3244-1_V1	-	UMEA 3244-1
Mycobacterium tuberculosis UT0097	1408960	PRJNA223592	223592	Terrabacteria group	Actinobacteria	4.44398	65.4	-	JLOH01	5	4301	4111	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381037	GCA_000669055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/055/GCA_000669055.1_Myco_tube_UT0097_V1	-	UT0097
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.9443	37.9	-	MJSU01	21	2974	2897	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357044	GCA_001751635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/635/GCA_001751635.1_ASM175163v1	-	BCW_2367
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.50805	30.9	-	NFQU01	1668	-	-	6/8/17	6/8/17	Contig	Swansea University	SAMN06888366	GCA_002177305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/305/GCA_002177305.1_ASM217730v1	28493321	RM3414
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.83475	52	-	JWQF01	44	4967	4724	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079719	GCA_000806765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/765/GCA_000806765.1_CFSAN024774_01.0	-	CFSAN024774
Staphylococcus aureus M1050	1392057	PRJNA217141	217141	Terrabacteria group	Firmicutes	2.90016	32.9	-	JCUR01	67	3082	2896	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334665	GCA_000546785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/785/GCA_000546785.1_Stap_aure_M1050_V1	-	M1050
Staphylococcus aureus M1053	1392059	PRJNA217143	217143	Terrabacteria group	Firmicutes	2.86746	32.8	-	JCUS01	48	3027	2865	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334667	GCA_000546805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/805/GCA_000546805.1_Stap_aure_M1053_V1	-	M1053
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74919	52.1	-	JWQE01	38	4847	4618	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079721	GCA_000806785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/785/GCA_000806785.1_CFSAN024776_01.0	-	CFSAN024776
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.73163	30.3	-	NFNL01	1379	-	-	6/8/17	6/8/17	Contig	Swansea University	SAMN06888336	GCA_002177765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/765/GCA_002177765.1_ASM217776v1	28493321	isolate_W21
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.93021	37.9	-	MJSV01	13	2966	2895	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357045	GCA_001751665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/665/GCA_001751665.1_ASM175166v1	-	BCW_2368
Mycobacterium tuberculosis UT0100	1408962	PRJNA223594	223594	Terrabacteria group	Actinobacteria	4.38326	65.5	-	JLOG01	15	4253	4086	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381039	GCA_000669075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/075/GCA_000669075.1_Myco_tube_UT0100_V1	-	UT0100
Escherichia coli UMEA 3257-1	1281230	PRJNA186332	186332	Proteobacteria	Gammaproteobacteria	5.30394	50.4	-	AWCX01	20	5440	5060	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885942	GCA_000461055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/055/GCA_000461055.1_Esch_coli_UMEA_3257-1_V1	-	UMEA 3257-1
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09818	39.7	-	CMPY01	58	2336	2093	3/23/15	3/4/17	Contig	SC	SAMEA2061731	GCA_001134785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/785/GCA_001134785.1_9803_7_78	-	19F
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.15897	66.6	-	LRZS01	52	5849	5539	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436501	GCA_001554955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/955/GCA_001554955.1_ASM155495v1	27103710	AU19803
Acinetobacter baumannii	470	PRJNA276040	276040	Proteobacteria	Gammaproteobacteria	3.80122	38.9	-	JZBX01	16	3563	3445	5/14/15	3/17/17	Contig	Translational Genomics Research Institute	SAMN03366522	GCA_001007685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/685/GCA_001007685.1_ASM100768v1	26462752	LUH_7841
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.41257	29.5	-	FAMC01	2729	-	-	3/31/16	3/31/16	Contig	UNIVERSITE LAVAL	SAMEA3664397	GCA_900012365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/365/GCA_900012365.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae	573	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	5.71919	57	-	MCNO01	135	5724	5390	9/2/16	2/22/17	Contig	SRCAMB	SAMN05413580	GCA_001720635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/635/GCA_001720635.1_ASM172063v1	-	SCPM-O-B-7850
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.30644	64.1	-	FVQK01	18	5399	5274	3/10/17	3/18/17	Scaffold	SC	SAMEA2275872	GCA_900138175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/175/GCA_900138175.1_12082_5_87	-	1146
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.12763	64.2	-	FVQR01	45	5149	4982	3/10/17	3/18/17	Scaffold	SC	SAMEA2275874	GCA_900138185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/185/GCA_900138185.1_12082_5_89	-	1148
Klebsiella pneumoniae	573	PRJNA269675	269675	Proteobacteria	Gammaproteobacteria	5.42793	57.4	-	MCNM01	54	5344	5083	9/2/16	2/21/17	Contig	SRCAMB	SAMN05413554	GCA_001720645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/645/GCA_001720645.1_ASM172064v1	-	SCPM-O-B-7749
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.68209	29.2	-	FADV01	4134	-	-	3/31/16	3/31/16	Contig	UNIVERSITE LAVAL	SAMEA3664180	GCA_900012815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/012/815/GCA_900012815.1_Peptoclostridium_difficile	-	-
Acinetobacter baumannii	470	PRJNA276040	276040	Proteobacteria	Gammaproteobacteria	3.8884	38.9	-	JZBU01	62	3664	3553	5/14/15	3/17/17	Contig	Translational Genomics Research Institute	SAMN03366515	GCA_001007705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/705/GCA_001007705.1_ASM100770v1	26462752	RUH1486
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.34104	66.4	-	LRZU01	77	6079	5788	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436503	GCA_001554975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/975/GCA_001554975.1_ASM155497v1	27103710	AU10658
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0168	39.7	-	CNSP02	120	2231	2010	3/23/15	3/11/17	Contig	SC	SAMEA1032421	GCA_001134825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/825/GCA_001134825.2_6999_3_20	-	65645
Escherichia coli UMEA 3264-1	1281231	PRJNA186334	186334	Proteobacteria	Gammaproteobacteria	5.21097	50.5	-	AWCY01	13	5333	4998	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885943	GCA_000461075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/075/GCA_000461075.1_Esch_coli_UMEA_3264-1_V1	-	UMEA 3264-1
Mycobacterium tuberculosis UT0104	1408963	PRJNA223595	223595	Terrabacteria group	Actinobacteria	4.41487	65.6	-	JLOF01	11	4290	4111	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381040	GCA_000669095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/095/GCA_000669095.1_Myco_tube_UT0104_V1	-	UT0104
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.77114	37.9	-	MJSW01	21	2804	2702	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357046	GCA_001751685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/685/GCA_001751685.1_ASM175168v1	-	BCW_2369
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.67322	30.3	-	NFNO01	772	-	-	6/8/17	6/8/17	Contig	Swansea University	SAMN06888333	GCA_002177855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/177/855/GCA_002177855.1_ASM217785v1	28493321	isolate_W19
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.67035	52.3	-	JWQC01	41	4749	4514	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079723	GCA_000806805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/805/GCA_000806805.1_CFSAN024778_01.0	-	CFSAN024778
Staphylococcus aureus M1054	1392060	PRJNA217144	217144	Terrabacteria group	Firmicutes	2.88043	32.8	-	JCUT01	66	3064	2879	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334668	GCA_000546825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/825/GCA_000546825.1_Stap_aure_M1054_V1	-	M1054
Staphylococcus aureus M1056	1392062	PRJNA217146	217146	Terrabacteria group	Firmicutes	2.89806	32.7	-	JCUU01	76	3088	2946	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334670	GCA_000546845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/845/GCA_000546845.1_Stap_aure_M1056_V1	-	M1056
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.67159	52.3	-	JWQB01	47	4748	4511	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079724	GCA_000806825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/825/GCA_000806825.1_CFSAN024779_01.0	-	CFSAN024779
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.84898	30.6	-	NFON01	2273	-	-	6/8/17	6/8/17	Contig	Swansea University	SAMN06888308	GCA_002178165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/165/GCA_002178165.1_ASM217816v1	28493321	isolate_H35
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.1068	37.8	-	MJSX01	33	3214	3124	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357047	GCA_001751695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/695/GCA_001751695.1_ASM175169v1	-	BCW_2370
Mycobacterium tuberculosis UT0105	1408964	PRJNA223596	223596	Terrabacteria group	Actinobacteria	4.3987	65.6	-	JLOE01	5	4290	4094	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381041	GCA_000669115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/115/GCA_000669115.1_Myco_tube_UT0105_V1	-	UT0105
Escherichia coli UMEA 3268-1	1281232	PRJNA186335	186335	Proteobacteria	Gammaproteobacteria	5.22371	50.5	-	AWCZ01	9	5330	4988	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885944	GCA_000461095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/095/GCA_000461095.1_Esch_coli_UMEA_3268-1_V1	-	UMEA 3268-1
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11016	39.7	-	CMHI01	67	2347	2146	3/22/15	3/10/17	Contig	SC	SAMEA1029437	GCA_001134845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/845/GCA_001134845.1_7038_5_8	-	SMRU2960
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.16116	66.6	-	LRZT01	66	5855	5548	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436502	GCA_001554995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/995/GCA_001554995.1_ASM155499v1	27103710	AU19804
Acinetobacter baumannii	470	PRJNA276040	276040	Proteobacteria	Gammaproteobacteria	4.1009	39	-	JZBV01	54	3893	3736	5/14/15	3/17/17	Contig	Translational Genomics Research Institute	SAMN03366518	GCA_001007725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/725/GCA_001007725.1_ASM100772v1	26462752	NM3
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.74095	30.8	-	FAFB01	5900	-	-	3/31/16	3/31/16	Contig	UNIVERSITE LAVAL	SAMEA3664208	GCA_900013015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/015/GCA_900013015.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae	573	PRJNA308116	308116	Proteobacteria	Gammaproteobacteria	5.32262	57.4	-	MAGD01	45	5259	5013	9/6/16	2/21/17	Contig	FDA	SAMN05213504	GCA_001720695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/695/GCA_001720695.1_ASM172069v1	-	CFSAN044574
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.22794	64.2	-	FVQS01	33	5243	5083	3/10/17	3/18/17	Scaffold	SC	SAMEA2275875	GCA_900138195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/195/GCA_900138195.1_12082_5_90	-	1149
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.08604	64.2	-	FVQT01	40	5125	4954	3/10/17	3/18/17	Scaffold	SC	SAMEA2275873	GCA_900138205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/205/GCA_900138205.1_12082_5_88	-	1147
Klebsiella pneumoniae	573	PRJNA308116	308116	Proteobacteria	Gammaproteobacteria	5.70139	57.1	-	MAGE01	119	5818	5524	9/6/16	2/21/17	Contig	FDA	SAMN05213499	GCA_001720705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/705/GCA_001720705.1_ASM172070v1	-	CFSAN044569
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.74094	28.7	-	FAGO01	2381	-	-	3/31/16	3/31/16	Contig	UNIVERSITE LAVAL	SAMEA3664248	GCA_900013725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/725/GCA_900013725.1_Peptoclostridium_difficile	-	-
Acinetobacter baumannii	470	PRJNA276040	276040	Proteobacteria	Gammaproteobacteria	3.96658	38.9	-	JZBW01	63	3774	3621	5/14/15	3/17/17	Contig	Translational Genomics Research Institute	SAMN03366519	GCA_001007745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/745/GCA_001007745.1_ASM100774v1	26462752	LUH_6220
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.25556	66.6	-	LRZZ01	35	5937	5654	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436508	GCA_001555015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/015/GCA_001555015.1_ASM155501v1	27103710	AU17550
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.14078	39.7	-	CMUX01	76	2314	1987	3/23/15	3/11/17	Contig	SC	SAMEA1022921	GCA_001134905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/905/GCA_001134905.1_5737_8_3	-	204
Escherichia coli UMEA 3271-1	1281233	PRJNA186336	186336	Proteobacteria	Gammaproteobacteria	5.21032	50.7	-	AWDA01	19	5482	5025	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885945	GCA_000461115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/115/GCA_000461115.1_Esch_coli_UMEA_3271-1_V1	-	UMEA 3271-1
Mycobacterium tuberculosis UT0106	1408965	PRJNA223597	223597	Terrabacteria group	Actinobacteria	4.43961	65.5	-	JLOD01	53	4327	4097	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381042	GCA_000669135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/135/GCA_000669135.1_Myco_tube_UT0106_V1	-	UT0106
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.95753	37.9	-	MJSY01	20	2998	2921	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357048	GCA_001751705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/705/GCA_001751705.1_ASM175170v1	-	BCW_2371
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.55896	30.2	-	NFPC01	773	-	-	6/8/17	6/8/17	Contig	Swansea University	SAMN06888293	GCA_002178395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/395/GCA_002178395.1_ASM217839v1	28493321	isolate_H21
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.8213	51.9	-	JWRA01	45	4881	4637	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079667	GCA_000806845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/845/GCA_000806845.1_CFSAN024722_01.0	-	CFSAN024722
Staphylococcus aureus M1058	1392064	PRJNA217148	217148	Terrabacteria group	Firmicutes	2.90303	32.8	-	JCUV01	46	3085	2895	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334672	GCA_000546865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/865/GCA_000546865.1_Stap_aure_M1058_V1	-	M1058
Staphylococcus aureus M1059	1392065	PRJNA217149	217149	Terrabacteria group	Firmicutes	2.89914	32.9	-	JCUW01	56	3054	2880	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334673	GCA_000546885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/885/GCA_000546885.1_Stap_aure_M1059_V1	-	M1059
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.76169	52	-	JWQZ01	72	4811	4553	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079668	GCA_000806865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/865/GCA_000806865.1_CFSAN024723_01.0	-	CFSAN024723
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.53736	30.8	-	NFQN01	1583	-	-	6/8/17	6/8/17	Contig	Swansea University	SAMN06888373	GCA_002178935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/935/GCA_002178935.1_ASM217893v1	28493321	RM3409
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.82753	37.8	-	MJSZ01	14	2881	2780	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357049	GCA_001751745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/745/GCA_001751745.1_ASM175174v1	-	BCW_2372
Mycobacterium tuberculosis UT0110	1408967	PRJNA223599	223599	Terrabacteria group	Actinobacteria	4.42269	65.6	-	JLOC01	9	4304	4138	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381044	GCA_000669155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/155/GCA_000669155.1_Myco_tube_UT0110_V1	-	UT0110
Escherichia coli UMEA 3292-1	1281235	PRJNA186338	186338	Proteobacteria	Gammaproteobacteria	5.4088	50.6	-	AWDB01	26	5631	5153	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885947	GCA_000461135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/135/GCA_000461135.1_Esch_coli_UMEA_3292-1_V1	-	UMEA 3292-1
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.15344	39.6	-	CMPL01	116	2435	2187	3/23/15	3/11/17	Contig	SC	SAMEA2061722	GCA_001134945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/945/GCA_001134945.1_9803_7_56	-	19B
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.26446	66.5	-	LRZV01	35	5971	5686	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436504	GCA_001555035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/035/GCA_001555035.1_ASM155503v1	27103710	AU17091
Acinetobacter baumannii	470	PRJNA276040	276040	Proteobacteria	Gammaproteobacteria	3.91953	38.9	-	JZBY01	157	3731	3585	5/14/15	3/17/17	Contig	Translational Genomics Research Institute	SAMN03366523	GCA_001007765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/765/GCA_001007765.1_ASM100776v1	26462752	4390
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.65429	29.1	-	FAHJ01	2035	-	-	3/31/16	3/31/16	Contig	UNIVERSITE LAVAL	SAMEA3664275	GCA_900013835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/835/GCA_900013835.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae	573	PRJNA308116	308116	Proteobacteria	Gammaproteobacteria	5.66043	57	-	MAGC01	89	5710	5405	9/6/16	2/21/17	Contig	FDA	SAMN05213503	GCA_001720745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/745/GCA_001720745.1_ASM172074v1	-	CFSAN044573
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.32017	64	-	FVQV01	54	5412	5270	3/10/17	3/18/17	Scaffold	SC	SAMEA2275877	GCA_900138215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/215/GCA_900138215.1_12082_5_91	-	1151
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.25407	64.1	-	FVQW01	29	5305	5149	3/10/17	3/18/17	Scaffold	SC	SAMEA2275879	GCA_900138225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/225/GCA_900138225.1_12082_5_93	-	1153
Klebsiella pneumoniae	573	PRJNA308116	308116	Proteobacteria	Gammaproteobacteria	5.65449	57.2	-	MAGF01	98	5769	5476	9/6/16	2/21/17	Contig	FDA	SAMN05213500	GCA_001720755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/755/GCA_001720755.1_ASM172075v1	-	CFSAN044570
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.4957	29.6	-	FAIS01	5432	-	-	3/31/16	3/31/16	Contig	UNIVERSITE LAVAL	SAMEA3664304	GCA_900013935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/935/GCA_900013935.1_Peptoclostridium_difficile	-	-
Acinetobacter baumannii	470	PRJNA276040	276040	Proteobacteria	Gammaproteobacteria	4.05452	38.9	-	JZBZ01	63	3888	3708	5/14/15	3/17/17	Contig	Translational Genomics Research Institute	SAMN03366524	GCA_001007775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/775/GCA_001007775.1_ASM100777v1	26462752	741019
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.26808	66.5	-	LRZX01	38	5966	5652	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436506	GCA_001555055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/055/GCA_001555055.1_ASM155505v1	27103710	AU25210
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.08844	39.6	-	CKCM01	47	2292	2036	3/21/15	3/11/17	Contig	SC	SAMEA1023969	GCA_001135025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/025/GCA_001135025.1_6593_4_8	-	type strain: N
Escherichia coli UMEA 3298-1	1281236	PRJNA186339	186339	Proteobacteria	Gammaproteobacteria	5.26051	50.6	-	AWDC01	13	5398	5063	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885948	GCA_000461155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/155/GCA_000461155.1_Esch_coli_UMEA_3298-1_V1	-	UMEA 3298-1
Mycobacterium tuberculosis UT0112	1408968	PRJNA223600	223600	Terrabacteria group	Actinobacteria	4.41744	65.5	-	JLOB01	4	4304	4108	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381045	GCA_000669175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/175/GCA_000669175.1_Myco_tube_UT0112_V1	-	UT0112
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.99503	37.9	-	MJTA01	15	3051	2974	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357050	GCA_001751765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/765/GCA_001751765.1_ASM175176v1	-	BCW_2373
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.59429	30.8	-	NFQQ01	1654	-	-	6/8/17	6/8/17	Contig	Swansea University	SAMN06888370	GCA_002178945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/945/GCA_002178945.1_ASM217894v1	28493321	RM1503
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74625	52.1	-	JWQW01	55	4809	4568	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079701	GCA_000806885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/885/GCA_000806885.1_CFSAN024756_02.0	-	CFSAN024756
Staphylococcus aureus M1066	1392067	PRJNA217151	217151	Terrabacteria group	Firmicutes	2.90168	32.9	-	JCUX01	22	3055	2889	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334675	GCA_000546905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/905/GCA_000546905.1_Stap_aure_M1066_V1	-	M1066
Staphylococcus aureus M1067	1392068	PRJNA217152	217152	Terrabacteria group	Firmicutes	2.92352	32.8	-	JCUY01	34	3075	2902	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334676	GCA_000546925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/925/GCA_000546925.1_Stap_aure_M1067_V1	-	M1067
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.85024	52.1	-	JWQT01	60	4962	4719	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079704	GCA_000806905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/905/GCA_000806905.1_CFSAN024759_02.0	-	CFSAN024759
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	1.55701	30.7	-	NFQT01	1756	-	-	6/8/17	6/8/17	Contig	Swansea University	SAMN06888367	GCA_002178955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/955/GCA_002178955.1_ASM217895v1	28493321	RM3407
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.96639	38.1	-	MJTB01	18	3051	2974	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357051	GCA_001751775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/775/GCA_001751775.1_ASM175177v1	-	CFSAN002240
Mycobacterium tuberculosis UT0113	1408969	PRJNA223601	223601	Terrabacteria group	Actinobacteria	4.40777	65.6	-	JLOA01	8	4294	4118	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381046	GCA_000669195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/195/GCA_000669195.1_Myco_tube_UT0113_V1	-	UT0113
Escherichia coli UMEA 3304-1	1281237	PRJNA186340	186340	Proteobacteria	Gammaproteobacteria	5.34638	50.8	-	AWDD01	26	5660	5133	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885949	GCA_000461175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/175/GCA_000461175.1_Esch_coli_UMEA_3304-1_V1	-	UMEA 3304-1
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.20805	39.6	-	CKCK01	69	2448	2194	3/21/15	3/11/17	Contig	SC	SAMEA1024093	GCA_001135045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/045/GCA_001135045.1_6593_4_22	-	33D
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.2626	66.6	-	LRZY01	51	5952	5676	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436507	GCA_001555075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/075/GCA_001555075.1_ASM155507v1	27103710	AU10713
Acinetobacter baumannii	470	PRJNA276040	276040	Proteobacteria	Gammaproteobacteria	4.28299	38.8	-	JZCA01	63	4168	4017	5/14/15	3/17/17	Contig	Translational Genomics Research Institute	SAMN03366525	GCA_001007815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/815/GCA_001007815.1_ASM100781v1	26462752	161/07
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.44197	29.8	-	FAJY01	2236	-	-	3/31/16	3/31/16	Contig	UNIVERSITE LAVAL	SAMEA3664341	GCA_900014125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/125/GCA_900014125.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae	573	PRJNA308116	308116	Proteobacteria	Gammaproteobacteria	5.55179	57.2	-	MAGG01	63	5654	5405	9/6/16	2/21/17	Contig	FDA	SAMN05213501	GCA_001720765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/765/GCA_001720765.1_ASM172076v1	-	CFSAN044571
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21122	64.1	-	FVQX01	45	5227	5054	3/10/17	3/18/17	Scaffold	SC	SAMEA2275882	GCA_900138235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/235/GCA_900138235.1_12082_5_95	-	1156
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.08541	64.2	-	FVQY01	45	5116	4949	3/10/17	3/18/17	Scaffold	SC	SAMEA2275881	GCA_900138245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/245/GCA_900138245.1_12082_5_94	-	1155
Klebsiella pneumoniae	573	PRJNA308116	308116	Proteobacteria	Gammaproteobacteria	5.71224	57.1	-	MAGI01	105	5785	5485	9/6/16	2/21/17	Contig	FDA	SAMN05213498	GCA_001720805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/805/GCA_001720805.1_ASM172080v1	-	CFSAN044568
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.38016	29.4	-	FAME01	4090	-	-	3/31/16	3/31/16	Contig	UNIVERSITE LAVAL	SAMEA3664399	GCA_900014645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/645/GCA_900014645.1_Peptoclostridium_difficile	-	-
Acinetobacter baumannii	470	PRJNA282778	282778	Proteobacteria	Gammaproteobacteria	3.86589	38.9	-	LCTE01	143	3740	3573	5/15/15	3/17/17	Contig	University of Malaya	SAMN03579460	GCA_001008125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/008/125/GCA_001008125.1_ASM100812v1	-	461
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.26067	66.5	-	LSAA01	89	5972	5656	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436509	GCA_001555095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/095/GCA_001555095.1_ASM155509v1	27103710	AU18132
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.13564	39.5	-	COAO02	265	2267	2065	3/22/15	3/11/17	Contig	SC	SAMEA1463091	GCA_001135065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/065/GCA_001135065.2_7622_2_16	-	BR1048
Escherichia coli UMEA 3314-1	1281238	PRJNA186341	186341	Proteobacteria	Gammaproteobacteria	4.87459	50.9	-	AWDE01	10	4980	4609	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885950	GCA_000461195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/195/GCA_000461195.1_Esch_coli_UMEA_3314-1_V1	-	UMEA 3314-1
Mycobacterium tuberculosis UT0115	1408970	PRJNA223602	223602	Terrabacteria group	Actinobacteria	4.51793	65.3	-	JLNZ01	16	4320	4118	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381047	GCA_000669215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/215/GCA_000669215.1_Myco_tube_UT0115_V1	-	UT0115
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.92383	37.9	-	MJTC01	22	2916	2834	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357052	GCA_001751785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/785/GCA_001751785.1_ASM175178v1	-	BCW_2375
Campylobacter jejuni	197	PRJNA312235	312235	Proteobacteria	delta/epsilon subdivisions	2.06383	30.5	-	NFMJ01	3056	-	-	6/8/17	6/8/17	Contig	Swansea University	SAMN06888364	GCA_002178965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/178/965/GCA_002178965.1_ASM217896v1	28493321	isolate_W8
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.67537	52.2	-	JWQP01	32	4752	4527	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079708	GCA_000806925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/925/GCA_000806925.1_CFSAN024763_02.0	-	CFSAN024763
Staphylococcus aureus M1069	1392069	PRJNA217153	217153	Terrabacteria group	Firmicutes	2.85913	32.8	-	JCUZ01	37	3023	2859	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334677	GCA_000546945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/945/GCA_000546945.1_Stap_aure_M1069_V1	-	M1069
Staphylococcus aureus M1070	1392070	PRJNA217154	217154	Terrabacteria group	Firmicutes	2.89949	32.8	-	JCVA01	129	3086	2868	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334678	GCA_000546965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/965/GCA_000546965.1_Stap_aure_M1070_V1	-	M1070
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.95055	52.1	-	JWQM01	47	5134	4793	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079712	GCA_000806945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/945/GCA_000806945.1_CFSAN024767_02.0	-	CFSAN024767
Campylobacter jejuni	197	PRJEB2075	203826	Proteobacteria	delta/epsilon subdivisions	2.03313	30.9	-	CUUG01	940	-	-	3/31/15	3/31/15	Scaffold	SC	SAMEA1401010	GCA_001224185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/185/GCA_001224185.1_7213_3_45	-	OXC6588
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.81324	37.4	-	MJTD01	21	2852	2757	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357053	GCA_001751825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/825/GCA_001751825.1_ASM175182v1	-	BCW_2376
Mycobacterium tuberculosis UT0116	1408971	PRJNA223603	223603	Terrabacteria group	Actinobacteria	4.41706	65.6	-	JLNY01	2	4291	4116	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381048	GCA_000669235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/235/GCA_000669235.1_Myco_tube_UT0116_V1	-	UT0116
Escherichia coli UMEA 3317-1	1281239	PRJNA186342	186342	Proteobacteria	Gammaproteobacteria	4.87426	50.6	-	AWDF01	6	4970	4648	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885951	GCA_000461215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/215/GCA_000461215.1_Esch_coli_UMEA_3317-1_V1	-	UMEA 3317-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0639	39.6	-	CNQY02	181	2226	1993	3/23/15	3/6/17	Contig	SC	SAMEA1032669	GCA_001135085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/085/GCA_001135085.2_6999_1_10	-	R34-3193
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.25711	66.6	-	LSAB01	43	5942	5653	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436510	GCA_001555115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/115/GCA_001555115.1_ASM155511v1	27103710	AU19319
Acinetobacter baumannii MRSN 7341	1409928	PRJNA223616	223616	Proteobacteria	Gammaproteobacteria	3.91128	39	-	JPIB01	52	3836	3645	6/14/15	3/17/17	Contig	J. Craig Venter Institute	SAMN02906930	GCA_001027885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/885/GCA_001027885.1_gdodcwi07_v01	-	MRSN 7341
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	5.06279	31	-	FABQ01	6300	-	-	3/31/16	3/31/16	Contig	UNIVERSITE LAVAL	SAMEA3664112	GCA_900014905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/905/GCA_900014905.1_Peptoclostridium_difficile	-	-
Klebsiella pneumoniae	573	PRJNA308116	308116	Proteobacteria	Gammaproteobacteria	5.6607	57	-	MAGH01	77	5705	5407	9/6/16	2/21/17	Contig	FDA	SAMN05213502	GCA_001720815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/815/GCA_001720815.1_ASM172081v1	-	CFSAN044572
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.11451	64.2	-	FVQU01	39	5129	4969	3/10/17	3/18/17	Scaffold	SC	SAMEA2275878	GCA_900138255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/255/GCA_900138255.1_12082_5_92	-	1152
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.07354	64.1	-	FVQZ01	18	5119	4957	3/10/17	3/18/17	Scaffold	SC	SAMEA2275869	GCA_900138265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/265/GCA_900138265.1_12163_2_96	-	1143
Klebsiella pneumoniae	573	PRJNA308116	308116	Proteobacteria	Gammaproteobacteria	5.49019	57.3	-	MAGK01	132	5513	5207	9/6/16	2/21/17	Contig	FDA	SAMN05213495	GCA_001720845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/845/GCA_001720845.1_ASM172084v1	-	CFSAN044564
Clostridioides difficile	1496	PRJEB11776	316813	Terrabacteria group	Firmicutes	4.4147	29.6	-	FAJF01	2118	-	-	3/31/16	3/31/16	Contig	UNIVERSITE LAVAL	SAMEA3664321	GCA_900015265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/265/GCA_900015265.1_Peptoclostridium_difficile	-	-
Acinetobacter baumannii MRSN 7339	1409927	PRJNA223615	223615	Proteobacteria	Gammaproteobacteria	3.95547	39.0894	plasmid pMRSN7339-2.3:NZ_CM003313.1/CM003313.1; plasmid pMRSN7339-8.7:NZ_CM003314.1/CM003314.1	JPHV01	34	3852	3694	6/14/15	3/17/17	Contig	J. Craig Venter Institute	SAMN02906929	GCA_001028265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/265/GCA_001028265.1_gdodcwi06_v01	-	MRSN 7339
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.5398	66.3	-	LRYU01	33	6281	5997	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436477	GCA_001555135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/135/GCA_001555135.1_ASM155513v1	27103710	AU7032
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.16558	39.6	-	CKDB01	55	2372	2154	3/21/15	3/11/17	Contig	SC	SAMEA1023966	GCA_001135145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/145/GCA_001135145.1_6593_5_18	-	23F
Escherichia coli UMEA 3318-1	1281240	PRJNA186343	186343	Proteobacteria	Gammaproteobacteria	5.20028	50.5	-	AWDG01	14	5303	4908	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885952	GCA_000461235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/235/GCA_000461235.1_Esch_coli_UMEA_3318-1_V1	-	UMEA 3318-1
Mycobacterium tuberculosis UT0123	1408973	PRJNA223605	223605	Terrabacteria group	Actinobacteria	4.35855	65.6	-	JLNW01	4	4255	4093	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381050	GCA_000669255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/255/GCA_000669255.1_Myco_tube_UT0123_V1	-	UT0123
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.13218	37.7	-	MJTE01	35	3227	3139	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357054	GCA_001751845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/845/GCA_001751845.1_ASM175184v1	-	BCW_2378
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	2.00657	30	-	MJVJ01	141	2104	1898	10/4/16	10/4/16	Scaffold	University of California at Davis	SAMN03359148	GCA_001761625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/625/GCA_001761625.1_ASM176162v1	-	BCW_3791
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74426	52.2	-	JWQD01	39	4852	4616	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079722	GCA_000806965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/965/GCA_000806965.1_CFSAN024777_01.0	-	CFSAN024777
Staphylococcus aureus M1074	1392073	PRJNA217157	217157	Terrabacteria group	Firmicutes	2.88297	32.9	-	JCVB01	61	3037	2847	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334681	GCA_000546985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/546/985/GCA_000546985.1_Stap_aure_M1074_V1	-	M1074
Staphylococcus aureus M1077	1392075	PRJNA217159	217159	Terrabacteria group	Firmicutes	2.87969	32.8	-	JCVC01	53	3044	2866	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334683	GCA_000547005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/005/GCA_000547005.1_Stap_aure_M1077_V1	-	M1077
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.66016	52.3	-	JWQA01	42	4734	4497	12/22/14	2/26/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079725	GCA_000806985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/985/GCA_000806985.1_CFSAN024780_01.0	-	CFSAN024780
Campylobacter jejuni	197	PRJNA203445	203445	Proteobacteria	delta/epsilon subdivisions	1.99775	30.1	-	MJVT01	95	2109	1899	10/4/16	10/4/16	Scaffold	University of California at Davis	SAMN03359161	GCA_001761825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/825/GCA_001761825.1_ASM176182v1	-	BCW_3807
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.03937	37.7	-	MJTF01	31	3125	3044	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357055	GCA_001751855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/855/GCA_001751855.1_ASM175185v1	-	BCW_2379
Mycobacterium tuberculosis UT0124	1408974	PRJNA223606	223606	Terrabacteria group	Actinobacteria	4.43643	65.4	-	JLNV01	8	4301	4103	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381051	GCA_000669275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/275/GCA_000669275.1_Myco_tube_UT0124_V1	-	UT0124
Escherichia coli UMEA 3329-1	1281242	PRJNA186345	186345	Proteobacteria	Gammaproteobacteria	4.99256	50.7	-	AWDH01	9	5162	4833	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885954	GCA_000461255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/255/GCA_000461255.1_Esch_coli_UMEA_3329-1_V1	-	UMEA 3329-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.14756	39.7	-	CNPK02	180	2270	1989	3/23/15	3/15/17	Contig	SC	SAMEA1032609	GCA_001135265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/265/GCA_001135265.2_6952_4_13	-	462746
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.49021	66.2	-	LRYO01	57	6321	6055	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436472	GCA_001555145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/145/GCA_001555145.1_ASM155514v1	27103710	AU6923
Acinetobacter baumannii MRSN 4106	1409925	PRJNA223613	223613	Proteobacteria	Gammaproteobacteria	3.95268	39.0005	plasmid pMRSN4106-6:NZ_CM003315.1/CM003315.1	JPHX01	62	3850	3608	6/14/15	3/17/17	Contig	J. Craig Venter Institute	SAMN02906927	GCA_001028305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/305/GCA_001028305.1_gdodcwi04_v01	-	MRSN 4106
Clostridioides difficile	1496	PRJEB8702	320491	Terrabacteria group	Firmicutes	5.05033	29.1	-	FJUH01	1138	4565	4528	5/4/16	5/4/16	Contig	UNIVERSITY OF WARWICK	SAMEA3294086	GCA_900074795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/074/795/GCA_900074795.1_CD105KSO7	-	CD105KSO7
Klebsiella pneumoniae	573	PRJNA308116	308116	Proteobacteria	Gammaproteobacteria	5.71821	56.7	-	MAGJ01	93	5816	5537	9/6/16	2/21/17	Contig	FDA	SAMN05213494	GCA_001720865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/865/GCA_001720865.1_ASM172086v1	-	CFSAN044563
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21426	64.2	-	FSLV01	33	5285	5120	12/14/16	3/21/17	Scaffold	SC	SAMEA2275823	GCA_900138275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/275/GCA_900138275.1_12163_2_66	-	1097
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.45265	63.9	-	FSLU01	17	5561	5367	12/14/16	3/22/17	Scaffold	SC	SAMEA2275812	GCA_900138285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/285/GCA_900138285.1_12163_2_58	-	1086
Klebsiella pneumoniae	573	PRJNA308116	308116	Proteobacteria	Gammaproteobacteria	5.71269	57.1	-	MAGM01	102	5775	5485	9/6/16	2/21/17	Contig	FDA	SAMN05252770	GCA_001720875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/875/GCA_001720875.1_ASM172087v1	-	CFSAN044566
Clostridioides difficile 6407	691158	PRJNA41647	41647	Terrabacteria group	Firmicutes	3.26475	28.7	-	ADEH01	3698	-	-	12/29/10	11/19/13	Scaffold	Cornell University	SAMN00006224	GCA_000193655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/655/GCA_000193655.2_ASM19365v2	-	6407
Acinetobacter baumannii MRSN 58	1409926	PRJNA223614	223614	Proteobacteria	Gammaproteobacteria	3.97418	39.0888	plasmid pMRSN58-2.7:NZ_CM003316.1/CM003316.1; plasmid pMRSN58-8.7:NZ_CM003317.1/CM003317.1	JPHW01	40	3874	3692	6/14/15	3/17/17	Contig	J. Craig Venter Institute	SAMN02906928	GCA_001028315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/315/GCA_001028315.1_gdodcwi05_v01	-	MRSN 58
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.35504	66.4	-	LRYY01	60	6055	5859	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436481	GCA_001555155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/155/GCA_001555155.1_ASM155515v1	27103710	AU18068
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.14038	39.4	-	CNUC02	187	2302	2088	3/23/15	3/5/17	Contig	SC	SAMEA1032490	GCA_001135325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/325/GCA_001135325.2_6999_5_23	-	218229
Escherichia coli UMEA 3337-1	1281244	PRJNA186347	186347	Proteobacteria	Gammaproteobacteria	5.21319	50.5	-	AWDI01	8	5322	4968	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885956	GCA_000461275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/275/GCA_000461275.1_Esch_coli_UMEA_3337-1_V1	-	UMEA 3337-1
Mycobacterium tuberculosis UT0017	1408975	PRJNA223607	223607	Terrabacteria group	Actinobacteria	4.38145	65.6	-	JLNU01	11	4284	4110	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02381052	GCA_000669295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/295/GCA_000669295.1_Myco_tube_UT0017_V1	-	UT0017
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.91837	37.9	-	MJTG01	22	2936	2864	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357056	GCA_001751865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/865/GCA_001751865.1_ASM175186v1	-	BCW_2380
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.66126	52.1	-	JWPZ01	44	4723	4484	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079726	GCA_000807005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/005/GCA_000807005.1_CFSAN024781_01.0	-	CFSAN024781
Staphylococcus aureus M1079	1392076	PRJNA217160	217160	Terrabacteria group	Firmicutes	2.87751	32.9	-	JCVD01	49	3011	2856	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334684	GCA_000547025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/025/GCA_000547025.1_Stap_aure_M1079_V1	-	M1079
Staphylococcus aureus M1080	1392077	PRJNA217161	217161	Terrabacteria group	Firmicutes	2.9055	32.8	-	JCVE01	70	3082	2900	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334685	GCA_000547045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/045/GCA_000547045.1_Stap_aure_M1080_V1	-	M1080
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.72974	52	-	JWRC01	56	4785	4544	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079665	GCA_000807025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/025/GCA_000807025.1_CFSAN024720_01.0	-	CFSAN024720
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.97125	37.9	-	MJTH01	22	3041	2961	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357057	GCA_001751885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/885/GCA_001751885.1_ASM175188v1	-	BCW_2381
Campylobacter jejuni subsp. jejuni BH-01-0142	482628	PRJNA27797	27797	Proteobacteria	delta/epsilon subdivisions	0.118623	27.7	-	ABKD01	53	117	106	9/12/08	1/8/14	Contig	Naval Medical Research Center	SAMN02470700	GCA_000172355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/355/GCA_000172355.1_ASM17235v1	18809665	BH-01-0142
Mycobacterium tuberculosis KT-0004	1417008	PRJNA226758	226758	Terrabacteria group	Actinobacteria	4.38256	65.6	-	JLNT01	69	4305	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02398693	GCA_000669315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/315/GCA_000669315.1_Myco_tube_KT-_0004_V1	-	KT-0004
Escherichia coli UMEA 3341-1	1281245	PRJNA186348	186348	Proteobacteria	Gammaproteobacteria	5.07385	50.6	-	AWDJ01	12	5190	4859	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885957	GCA_000461295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/295/GCA_000461295.1_Esch_coli_UMEA_3341-1_V1	-	UMEA 3341-1
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.17725	39.6	-	CKDE01	86	2430	2194	3/21/15	3/11/17	Contig	SC	SAMEA1023667	GCA_001135345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/345/GCA_001135345.1_6593_5_17	-	23A
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.86179	66.1	-	LRYM01	66	6589	6284	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436470	GCA_001555165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/165/GCA_001555165.1_ASM155516v1	27103710	AU9739
Acinetobacter baumannii MRSN 3527	1409923	PRJNA223611	223611	Proteobacteria	Gammaproteobacteria	4.20619	38.9006	plasmid pMRSN3527-6:NZ_CM003318.1/CM003318.1	JPHZ01	46	4147	3891	6/14/15	3/17/17	Contig	J. Craig Venter Institute	SAMN02906923	GCA_001028325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/325/GCA_001028325.1_gdodcwi02_v01	-	MRSN 3527
Clostridioides difficile 6466	691159	PRJNA41649	41649	Terrabacteria group	Firmicutes	3.89452	28.3	-	ADDE01	376	-	-	12/29/10	11/19/13	Scaffold	Cornell University	SAMN00006215	GCA_000193675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/675/GCA_000193675.2_ASM19367v2	-	6466
Klebsiella pneumoniae	573	PRJNA308116	308116	Proteobacteria	Gammaproteobacteria	5.61407	57	-	MAGL01	75	5636	5360	9/6/16	2/21/17	Contig	FDA	SAMN05213496	GCA_001720905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/905/GCA_001720905.1_ASM172090v1	-	CFSAN044565
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16059	64.1	-	FVRA01	6	5266	5087	3/10/17	3/18/17	Scaffold	SC	SAMEA2266541	GCA_900138295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/295/GCA_900138295.1_11893_7_41	-	1168_1
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15926	64.1	-	FVRB01	16	5275	5086	3/10/17	3/18/17	Scaffold	SC	SAMEA2266542	GCA_900138305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/305/GCA_900138305.1_11893_7_42	-	1168_2
Klebsiella pneumoniae	573	PRJNA324523	324523	Proteobacteria	Gammaproteobacteria	5.45289	57.3	-	LYYE01	565	5297	4850	9/8/16	2/21/17	Contig	Christian Medical College	SAMN05207300	GCA_001721565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/565/GCA_001721565.1_ASM172156v1	-	B7868
Clostridioides difficile 6534	691161	PRJNA41653	41653	Terrabacteria group	Firmicutes	4.34423	29	-	ADEJ01	1201	-	-	12/29/10	11/19/13	Scaffold	Cornell University	SAMN00006223	GCA_000193715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/715/GCA_000193715.2_ASM19371v2	-	6534
Acinetobacter baumannii MRSN 3942	1409924	PRJNA223612	223612	Proteobacteria	Gammaproteobacteria	3.97572	39.0005	plasmid pMRSN3942-6:NZ_CM003319.1/CM003319.1	JPHY01	69	3877	3616	6/14/15	3/17/17	Contig	J. Craig Venter Institute	SAMN02906926	GCA_001028335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/335/GCA_001028335.1_gdodcwi03_v01	-	MRSN 3942
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.35685	66.4	-	LRYZ01	59	6051	5852	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436482	GCA_001555215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/215/GCA_001555215.1_ASM155521v1	27103710	AU24156
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05705	39.5	-	CNUR02	219	2220	2030	3/22/15	3/5/17	Contig	SC	SAMEA1032448	GCA_001135365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/365/GCA_001135365.2_6999_6_12	-	279388
Escherichia coli UMEA 3355-1	1281247	PRJNA186350	186350	Proteobacteria	Gammaproteobacteria	5.19952	50.8	-	AWDK01	8	5350	4972	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885959	GCA_000461315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/315/GCA_000461315.1_Esch_coli_UMEA_3355-1_V1	-	UMEA 3355-1
Mycobacterium tuberculosis KT-0010	1417009	PRJNA226759	226759	Terrabacteria group	Actinobacteria	4.39919	65.6	-	JLNS01	18	4298	4109	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02398694	GCA_000669335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/335/GCA_000669335.1_Myco_tube_KT-_0010_V1	-	KT-0010
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.02026	37.8	-	MJTI01	22	3092	2998	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357058	GCA_001751925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/925/GCA_001751925.1_ASM175192v1	-	BCW_2382
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.82353	52	-	JWRD01	43	4899	4661	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079664	GCA_000807035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/035/GCA_000807035.1_CFSAN024719_01.0	-	CFSAN024719
Staphylococcus aureus M1081	1392078	PRJNA217162	217162	Terrabacteria group	Firmicutes	2.93173	32.8	-	JCVF01	58	3095	2901	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334686	GCA_000547065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/065/GCA_000547065.1_Stap_aure_M1081_V1	-	M1081
Staphylococcus aureus M1082	1392079	PRJNA217163	217163	Terrabacteria group	Firmicutes	2.90869	32.8	-	JCVG01	56	3065	2905	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334687	GCA_000547085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/085/GCA_000547085.1_Stap_aure_M1082_V1	-	M1082
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.64156	52.3	-	JWRH01	39	4704	4472	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079660	GCA_000807045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/045/GCA_000807045.1_CFSAN024715_01.0	-	CFSAN024715
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.95159	37.8	-	MJTK01	21	3003	2932	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357060	GCA_001751965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/965/GCA_001751965.1_ASM175196v1	-	BCW_2384
Mycobacterium tuberculosis KT-0012	1417010	PRJNA226760	226760	Terrabacteria group	Actinobacteria	4.39403	65.5	-	JLNR01	41	4312	4092	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02398695	GCA_000669355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/355/GCA_000669355.1_Myco_tube_KT-_0012_V1	-	KT-0012
Escherichia coli UMEA 3391-1	1281248	PRJNA186351	186351	Proteobacteria	Gammaproteobacteria	5.23245	50.6	-	AWDL01	9	5349	5004	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885960	GCA_000461335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/335/GCA_000461335.1_Esch_coli_UMEA_3391-1_V1	-	UMEA 3391-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05093	39.6	-	COBX02	126	2249	2028	3/23/15	3/11/17	Contig	SC	SAMEA1463112	GCA_001135445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/445/GCA_001135445.2_7622_3_58	-	CH2061
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.54815	66.2	-	LRZA01	91	6328	5985	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436483	GCA_001555225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/225/GCA_001555225.1_ASM155522v1	27103710	AU7198
Acinetobacter baumannii MRSN 3405	1409922	PRJNA223610	223610	Proteobacteria	Gammaproteobacteria	4.08272	38.9006	plasmid pMRSN3405-6:NZ_CM003320.1/CM003320.1	JPIA01	64	4009	3736	6/14/15	3/17/17	Contig	J. Craig Venter Institute	SAMN02906922	GCA_001028385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/028/385/GCA_001028385.1_gdodcwi01_v01	-	MRSN 3405
Clostridioides difficile	1496	PRJNA327106	327106	Terrabacteria group	Firmicutes	4.16737	28.8	-	MKXQ01	150	-	-	12/22/16	12/22/16	Scaffold	None	SAMN05509314	GCA_001913915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/913/915/GCA_001913915.1_ASM191391v1	-	-
Klebsiella pneumoniae	573	PRJNA342955	342955	Proteobacteria	Gammaproteobacteria	5.51797	57.2	-	MJBQ01	273	5806	5286	9/26/16	2/21/17	Contig	University of Sao Paulo	SAMN05771180	GCA_001746765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/746/765/GCA_001746765.1_ASM174676v1	-	KP171
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16065	64.1	-	FVRE01	7	5271	5086	3/10/17	3/18/17	Scaffold	SC	SAMEA2266544	GCA_900138315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/315/GCA_900138315.1_11893_7_45	-	1168_4
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.1601	64.1	-	FVRC01	2	5265	5083	3/10/17	3/18/17	Scaffold	SC	SAMEA2266543	GCA_900138325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/325/GCA_900138325.1_11893_7_44	-	1168_3
Klebsiella pneumoniae	573	PRJNA275512	275512	Proteobacteria	Gammaproteobacteria	5.27689	57.5	-	LSMF01	307	5320	4963	11/7/16	2/21/17	Contig	"West China Hospital, Sichuan University"	SAMN04482605	GCA_001867195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/195/GCA_001867195.1_ASM186719v1	-	WCHKP1511
Clostridioides difficile	1496	PRJEB6886	335808	Terrabacteria group	Firmicutes	3.98557	28.8	-	CCRZ01	515	-	-	7/29/16	1/26/17	Scaffold	UOL	SAMEA2674825	GCA_900002465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/002/465/GCA_900002465.1_CD105HS27	-	-
Acinetobacter baumannii	470	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.90651	38.9	-	JWGN01	227	3747	3640	7/10/15	3/17/17	Contig	University of Washington	SAMN03196969	GCA_001052015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/015/GCA_001052015.1_ASM105201v1	26230489	1008_ABAU
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.5365	66.2	-	LRZE01	124	6359	5973	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436487	GCA_001555235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/235/GCA_001555235.1_ASM155523v1	27103710	AU10836
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.14012	39.7	-	CMVR01	159	2273	2020	3/23/15	3/11/17	Contig	SC	SAMEA1022888	GCA_001135465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/465/GCA_001135465.1_5756_6_12	-	308
Escherichia coli UMEA 3490-1	1281251	PRJNA186354	186354	Proteobacteria	Gammaproteobacteria	5.19806	50.5	-	AWDM01	9	5323	4973	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885963	GCA_000461355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/355/GCA_000461355.1_Esch_coli_UMEA_3490-1_V1	-	UMEA 3490-1
Mycobacterium tuberculosis KT-0020	1417012	PRJNA226762	226762	Terrabacteria group	Actinobacteria	4.39699	65.5	-	JLNP01	15	4273	4089	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02398697	GCA_000669375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/375/GCA_000669375.1_Myco_tube_KT-_0020_V1	-	KT-0020
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.95765	37.9	-	MJTM01	23	3002	2922	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357062	GCA_001752005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/005/GCA_001752005.1_ASM175200v1	-	CFSAN002250
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.71819	52.2	-	JWRF01	41	4738	4485	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079662	GCA_000807055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/055/GCA_000807055.1_CFSAN024717_01.0	-	CFSAN024717
Staphylococcus aureus M1084	1392080	PRJNA217164	217164	Terrabacteria group	Firmicutes	2.89017	32.9	-	JCVH01	25	3045	2874	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02334688	GCA_000547105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/105/GCA_000547105.1_Stap_aure_M1084_V1	-	M1084
Staphylococcus aureus M1085	1392081	PRJNA217165	217165	Terrabacteria group	Firmicutes	2.90238	32.9	-	JCVI01	27	3054	2884	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334689	GCA_000547125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/125/GCA_000547125.1_Stap_aure_M1085_V1	-	M1085
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.72436	52.2	-	JWRG01	32	4733	4496	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079661	GCA_000807105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/105/GCA_000807105.1_CFSAN024716_01.0	-	CFSAN024716
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.02134	37.8	-	MJTN01	24	3071	2999	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357063	GCA_001752025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/025/GCA_001752025.1_ASM175202v1	-	CFSAN002251
Mycobacterium tuberculosis KT-0025	1417013	PRJNA226763	226763	Terrabacteria group	Actinobacteria	4.40707	65.5	-	JLNO01	21	4291	4099	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02398698	GCA_000669395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/395/GCA_000669395.1_Myco_tube_KT-_0025_V1	-	KT-0025
Escherichia coli UMEA 3585-1	1281252	PRJNA186355	186355	Proteobacteria	Gammaproteobacteria	5.24423	50.5	-	AWDN01	5	5367	5032	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885964	GCA_000461375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/375/GCA_000461375.1_Esch_coli_UMEA_3585-1_V1	-	UMEA 3585-1
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.10391	39.6	-	CMST01	105	2340	2091	3/22/15	3/11/17	Contig	SC	SAMEA2062397	GCA_001135505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/505/GCA_001135505.1_9803_8_78	-	6C
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.32133	66.5	-	LRZL01	39	5984	5703	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436494	GCA_001555255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/255/GCA_001555255.1_ASM155525v1	27103710	AU11990
Acinetobacter baumannii	470	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.89927	38.9	-	JWAN01	223	3737	3614	7/10/15	3/17/17	Contig	University of Washington	SAMN03197125	GCA_001052325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/325/GCA_001052325.1_ASM105232v1	26230489	1168_ABAU
Clostridioides difficile	1496	PRJEB6886	335808	Terrabacteria group	Firmicutes	3.95965	28.9	-	CCSA01	614	-	-	7/29/16	1/26/17	Scaffold	UOL	SAMEA2674819	GCA_900002495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/002/495/GCA_900002495.1_CD105HS26	-	-
Klebsiella pneumoniae	573	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	5.56529	57.2	-	MPCD01	9	5595	5313	11/10/16	2/21/17	Contig	Centers for Disease Control and Prevention	SAMN04014883	GCA_001874695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/695/GCA_001874695.1_ASM187469v1	-	AR_0042
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16059	64.1	-	FVRF01	6	5266	5079	3/10/17	3/18/17	Scaffold	SC	SAMEA2266546	GCA_900138335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/335/GCA_900138335.1_11893_7_47	-	1168_6
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16041	64.1	-	FVRD01	8	5264	5083	3/10/17	3/18/17	Scaffold	SC	SAMEA2266545	GCA_900138345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/345/GCA_900138345.1_11893_7_46	-	1168_5
Klebsiella pneumoniae	573	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	5.73728	56.6	-	MPCC01	8	5812	5509	11/10/16	2/21/17	Contig	Centers for Disease Control and Prevention	SAMN04014884	GCA_001874715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/715/GCA_001874715.1_ASM187471v1	-	AR_0043
Acinetobacter baumannii	470	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.88442	38.9	-	JWFE01	338	3712	3587	7/10/15	3/17/17	Contig	University of Washington	SAMN03197004	GCA_001052675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/675/GCA_001052675.1_ASM105267v1	26230489	1039_ABAU
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.31755	66.5	-	LRZP01	80	6011	5678	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436498	GCA_001555295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/295/GCA_001555295.1_ASM155529v1	27103710	AU25116
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10792	39.7	-	CLXD01	78	2267	2029	3/21/15	3/11/17	Contig	SC	SAMEA1029046	GCA_001135605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/605/GCA_001135605.1_6983_5_22	-	SMRU2326
Escherichia coli UMEA 3592-1	1281253	PRJNA186356	186356	Proteobacteria	Gammaproteobacteria	5.2158	50.7	-	AWDO01	8	5395	4999	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885965	GCA_000461395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/395/GCA_000461395.1_Esch_coli_UMEA_3592-1_V1	-	UMEA 3592-1
Mycobacterium tuberculosis KT-0029	1417014	PRJNA226764	226764	Terrabacteria group	Actinobacteria	4.37502	65.6	-	JLNN01	75	4300	4094	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02398699	GCA_000669415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/415/GCA_000669415.1_Myco_tube_KT-_0029_V1	-	KT-0029
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.88929	37.9	-	MJTO01	17	2919	2833	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357064	GCA_001752045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/045/GCA_001752045.1_ASM175204v1	-	BCW_2388
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.75247	52	-	JWRE01	32	4801	4559	12/22/14	2/27/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079663	GCA_000807125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/125/GCA_000807125.1_CFSAN024718_01.0	-	CFSAN024718
Staphylococcus aureus M1087	1392082	PRJNA217166	217166	Terrabacteria group	Firmicutes	2.85409	32.8	-	JCVJ01	40	3019	2855	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334690	GCA_000547145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/145/GCA_000547145.1_Stap_aure_M1087_V1	-	M1087
Staphylococcus aureus M1088	1392083	PRJNA217167	217167	Terrabacteria group	Firmicutes	2.88837	32.9	-	JCVK01	50	3050	2870	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334691	GCA_000547165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/165/GCA_000547165.1_Stap_aure_M1088_V1	-	M1088
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA263986	263986	Proteobacteria	Gammaproteobacteria	4.90187	51.8	-	JRXB01	219	5035	4727	12/31/14	2/27/17	Contig	NARIC ABC	SAMN03112706	GCA_000812575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/575/GCA_000812575.1_ASM81257v1	25676749	SI69/94
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.92109	37.9	-	MJTP01	11	2966	2901	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357065	GCA_001752055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/055/GCA_001752055.1_ASM175205v1	-	CFSAN002253
Mycobacterium tuberculosis KT-0031	1417015	PRJNA226765	226765	Terrabacteria group	Actinobacteria	4.37773	65.6	-	JLNM01	72	4314	4097	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02398700	GCA_000669435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/435/GCA_000669435.1_Myco_tube_KT-_0031_V1	-	KT-0031
Escherichia coli UMEA 3609-1	1281254	PRJNA186357	186357	Proteobacteria	Gammaproteobacteria	5.25129	50.7	-	AWDP01	7	5377	4990	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885966	GCA_000461415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/415/GCA_000461415.1_Esch_coli_UMEA_3609-1_V1	-	UMEA 3609-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.03931	39.5	-	CNNQ02	133	2193	1999	3/23/15	3/5/17	Contig	SC	SAMEA1032435	GCA_001135645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/645/GCA_001135645.2_6925_1_55	-	R34-3036
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.25354	66.6	-	LSAC01	46	5944	5653	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436511	GCA_001555315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/315/GCA_001555315.1_ASM155531v1	27103710	AU24526
Acinetobacter baumannii	470	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.89915	38.9	-	JWFF01	247	3731	3618	7/10/15	3/17/17	Contig	University of Washington	SAMN03197003	GCA_001053695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/695/GCA_001053695.1_ASM105369v1	26230489	1038_ABAU
Klebsiella pneumoniae	573	PRJNA292901	292901	Proteobacteria	Gammaproteobacteria	5.89479	57	-	MPCJ01	12	6059	5746	11/10/16	2/21/17	Contig	Centers for Disease Control and Prevention	SAMN04014853	GCA_001874725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/725/GCA_001874725.1_ASM187472v1	-	AR_0012
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15956	64.1	-	FVRG01	8	5269	5081	3/10/17	3/18/17	Scaffold	SC	SAMEA2266547	GCA_900138355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/355/GCA_900138355.1_11893_7_48	-	1168_7
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15896	64.1	-	FVRK01	8	5276	5085	3/10/17	3/18/17	Scaffold	SC	SAMEA2266549	GCA_900138365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/365/GCA_900138365.1_11893_7_50	-	1168_9
Klebsiella pneumoniae	573	PRJNA292901	292901	Proteobacteria	Gammaproteobacteria	6.01788	56.7	-	MPCK01	15	6203	5848	11/10/16	2/21/17	Contig	Centers for Disease Control and Prevention	SAMN04014851	GCA_001874865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/865/GCA_001874865.1_ASM187486v1	-	AR_0010
Acinetobacter baumannii	470	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.65574	38.9	-	JWEQ01	302	3456	3312	7/10/15	3/17/17	Contig	University of Washington	SAMN03197018	GCA_001053755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/755/GCA_001053755.1_ASM105375v1	26230489	1054_ABAU
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.24056	66.6	-	LRZQ01	64	5952	5678	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436499	GCA_001555325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/325/GCA_001555325.1_ASM155532v1	27103710	AU9899
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.02896	39.7	-	CMLR01	72	2226	2024	3/23/15	3/11/17	Contig	SC	SAMEA1029418	GCA_001135725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/725/GCA_001135725.1_7054_6_13	-	SMRU3085
Escherichia coli UMEA 3617-1	1281255	PRJNA186358	186358	Proteobacteria	Gammaproteobacteria	5.19768	50.5	-	AWDQ01	22	5339	4974	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885967	GCA_000461435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/435/GCA_000461435.1_Esch_coli_UMEA_3617-1_V1	-	UMEA 3617-1
Mycobacterium tuberculosis KT-0032	1417016	PRJNA226766	226766	Terrabacteria group	Actinobacteria	4.39392	65.6	-	JLNL01	72	4323	4116	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02398701	GCA_000669455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/455/GCA_000669455.1_Myco_tube_KT-_0032_V1	-	KT-0032
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.88692	37.9	-	MJTQ01	19	2916	2826	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357066	GCA_001752075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/075/GCA_001752075.1_ASM175207v1	-	BCW_2390
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA263986	263986	Proteobacteria	Gammaproteobacteria	5.01114	52.1	-	JRXC01	170	5083	4736	12/31/14	2/27/17	Contig	NARIC ABC	SAMN03112707	GCA_000812595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/595/GCA_000812595.1_ASM81259v1	25676749	SI54/04
Staphylococcus aureus M1089	1392084	PRJNA217168	217168	Terrabacteria group	Firmicutes	2.90781	32.8	-	JCVL01	59	3091	2916	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334692	GCA_000547185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/185/GCA_000547185.1_Stap_aure_M1089_V1	-	M1089
Staphylococcus aureus M1090	1392085	PRJNA217169	217169	Terrabacteria group	Firmicutes	2.85914	32.8	-	JCVM01	50	3015	2834	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02334693	GCA_000547205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/205/GCA_000547205.1_Stap_aure_M1090_V1	-	M1090
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001591	1232184	PRJNA175305	175305	Proteobacteria	Gammaproteobacteria	4.77211	52.2	-	JXXJ01	39	4832	4586	2/5/15	2/27/17	Contig	FDA	SAMN02058518	GCA_000832685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/685/GCA_000832685.1_CFSAN001591_01.0	-	CFSAN001591
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.01427	37.8	-	MJTR01	20	3064	2993	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357067	GCA_001752105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/105/GCA_001752105.1_ASM175210v1	-	BCW_2391
Mycobacterium tuberculosis KT-0033	1417017	PRJNA226767	226767	Terrabacteria group	Actinobacteria	4.42575	65.6	-	JLNK01	11	4306	4110	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02398702	GCA_000669475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/475/GCA_000669475.1_Myco_tube_KT-0033_V1	-	KT-0033
Escherichia coli UMEA 3632-1	1281256	PRJNA186359	186359	Proteobacteria	Gammaproteobacteria	5.32865	50.6	-	AWDR01	8	5493	5159	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885968	GCA_000461455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/455/GCA_000461455.1_Esch_coli_UMEA_3632-1_V1	-	UMEA 3632-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07083	39.6	-	CODA02	164	2234	2034	3/22/15	3/11/17	Contig	SC	SAMEA1463299	GCA_001135765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/765/GCA_001135765.2_7622_3_94	-	GL3060
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.82542	66.2	-	LSAD01	53	6520	6265	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436512	GCA_001555335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/335/GCA_001555335.1_ASM155533v1	27103710	AU10756
Acinetobacter baumannii	470	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.9041	38.9	-	JUKM01	228	3743	3631	7/10/15	3/17/17	Contig	University of Washington	SAMN03198218	GCA_001059495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/495/GCA_001059495.1_ASM105949v1	26230489	996_ABAU
Klebsiella pneumoniae	573	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	5.62866	57.2	-	MPCG01	14	5773	5387	11/10/16	2/21/17	Contig	Centers for Disease Control and Prevention	SAMN04014880	GCA_001874875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/875/GCA_001874875.1_ASM187487v1	-	AR_0039
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15962	64.1	-	FVRH01	9	5270	5086	3/10/17	3/18/17	Scaffold	SC	SAMEA2266550	GCA_900138375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/375/GCA_900138375.1_11893_7_51	-	1168_10
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.1601	64.1	-	FVRI01	9	5271	5078	3/10/17	3/18/17	Scaffold	SC	SAMEA2266548	GCA_900138385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/385/GCA_900138385.1_11893_7_49	-	1168_8
Klebsiella pneumoniae	573	PRJNA292901	292901	Proteobacteria	Gammaproteobacteria	5.88612	57	-	MPCN01	6	6006	5703	11/10/16	2/22/17	Contig	Centers for Disease Control and Prevention	SAMN04014844	GCA_001875025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/025/GCA_001875025.1_ASM187502v1	-	AR_0003
Acinetobacter baumannii	470	PRJNA286875	286875	Proteobacteria	Gammaproteobacteria	4.4849	39	-	LFYW01	10	4391	4124	7/14/15	3/17/17	Contig	University of Kansas Medical Center	SAMN03771474	GCA_001077575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/575/GCA_001077575.1_ASM107757v1	26358595	SP1917
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.88469	66.1	-	LSAE01	70	6580	6228	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436513	GCA_001555375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/375/GCA_001555375.1_ASM155537v1	27103710	AU20671
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.19845	39.4	-	CLSN01	93	2423	2180	3/21/15	3/4/17	Contig	SC	SAMEA1028927	GCA_001135885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/885/GCA_001135885.1_6972_4_14	-	SMRU2606
Escherichia coli UMEA 3656-1	1281258	PRJNA186361	186361	Proteobacteria	Gammaproteobacteria	5.07843	50.4	-	AWDT01	14	5235	4901	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885970	GCA_000461475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/475/GCA_000461475.1_Esch_coli_UMEA_3656-1_V1	-	UMEA 3656-1
Mycobacterium tuberculosis KT-0034	1417018	PRJNA226768	226768	Terrabacteria group	Actinobacteria	4.37578	65.6	-	JLNJ01	68	4310	4105	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02398703	GCA_000669495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/495/GCA_000669495.1_Myco_tube_KT-0034_V1	-	KT-0034
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.99043	37.8	-	MJTS01	15	3069	2987	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357068	GCA_001752125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/125/GCA_001752125.1_ASM175212v1	-	BCW_2392
Salmonella enterica subsp. enterica	59201	PRJNA274416	274416	Proteobacteria	Gammaproteobacteria	4.95099	52.1	-	JXYU01	39	5177	4868	2/20/15	2/27/17	Contig	Texas Tech University	SAMN03328456	GCA_000878845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/845/GCA_000878845.1_10TTU468_a5	25883279	10TTU468
Staphylococcus aureus M1091	1392086	PRJNA217170	217170	Terrabacteria group	Firmicutes	2.86237	32.8	-	JCVN01	54	3018	2838	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334694	GCA_000547225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/225/GCA_000547225.1_Stap_aure_M1091_V1	-	M1091
Staphylococcus aureus M1094	1392087	PRJNA217171	217171	Terrabacteria group	Firmicutes	2.88556	32.8	-	JCVO01	71	3064	2926	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334695	GCA_000547245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/245/GCA_000547245.1_Stap_aure_M1094_V1	-	M1094
Salmonella enterica subsp. enterica	59201	PRJNA274419	274419	Proteobacteria	Gammaproteobacteria	4.94971	52.1	-	JXYV01	37	5168	4862	2/20/15	2/27/17	Contig	Texas Tech University	SAMN03328457	GCA_000878855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/855/GCA_000878855.1_11TTU1590_a5	-	11TTU1590
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.01785	37.8	-	MJTU01	21	3084	2997	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357070	GCA_001752145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/145/GCA_001752145.1_ASM175214v1	-	CFSAN002278
Mycobacterium tuberculosis KT-0042	1417021	PRJNA226771	226771	Terrabacteria group	Actinobacteria	4.36824	65.6	-	JLNG01	26	4274	4083	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02398706	GCA_000669515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/515/GCA_000669515.1_Myco_tube_KT-0042_V1	-	KT-0042
Escherichia coli UMEA 3662-1	1281259	PRJNA186362	186362	Proteobacteria	Gammaproteobacteria	5.11858	50.6	-	AWDU01	5	5272	4944	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885971	GCA_000461495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/495/GCA_000461495.1_Esch_coli_UMEA_3662-1_V1	-	UMEA 3662-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04752	39.8	-	COAJ02	232	2219	2021	3/23/15	3/11/17	Contig	SC	SAMEA1463193	GCA_001135965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/965/GCA_001135965.2_7622_2_12	-	BR1036
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.74095	66.2	-	LSAF01	89	6453	6053	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436514	GCA_001555395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/395/GCA_001555395.1_ASM155539v1	27103710	AU24807
Acinetobacter baumannii	470	PRJNA291464	291464	Proteobacteria	Gammaproteobacteria	3.90984	38.9	-	LGYW01	136	3799	3643	8/31/15	3/18/17	Contig	CSIR-Institute of Microbial Technology	SAMN03944736	GCA_001276055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/055/GCA_001276055.1_ASM127605v1	26543133	10441_14
Klebsiella pneumoniae	573	PRJNA292901	292901	Proteobacteria	Gammaproteobacteria	5.75367	57.1	-	MPCM02	10	5913	5509	11/10/16	6/9/17	Contig	Centers for Disease Control and Prevention	SAMN04014845	GCA_001875045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/045/GCA_001875045.2_ASM187504v2	-	AR_0004
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16068	64.1	-	FVRJ01	6	5268	5079	3/10/17	3/18/17	Scaffold	SC	SAMEA2266551	GCA_900138395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/395/GCA_900138395.1_11893_7_52	-	1168_11
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15977	64.1	-	FVRM01	10	5272	5081	3/10/17	3/18/17	Scaffold	SC	SAMEA2266553	GCA_900138405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/405/GCA_900138405.1_11893_7_54	-	1168_13
Klebsiella pneumoniae	573	PRJNA292901	292901	Proteobacteria	Gammaproteobacteria	5.74133	57.1	-	MPCL02	8	5888	5574	11/10/16	6/9/17	Contig	Centers for Disease Control and Prevention	SAMN04014846	GCA_001875055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/055/GCA_001875055.2_ASM187505v2	-	AR_0005
Acinetobacter baumannii	470	PRJNA291463	291463	Proteobacteria	Gammaproteobacteria	4.1207	38.8	-	LGYV01	187	4086	3852	8/31/15	3/18/17	Contig	CSIR-Institute of Microbial Technology	SAMN03944735	GCA_001276085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/085/GCA_001276085.1_ASM127608v1	26472849	5021_13
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.66735	66.3	-	LSAG01	46	6379	6130	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436515	GCA_001555415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/415/GCA_001555415.1_ASM155541v1	27103710	AU14820
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08262	39.7	-	CLAC01	63	2299	2082	3/21/15	3/4/17	Contig	SC	SAMEA1025820	GCA_001135985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/985/GCA_001135985.1_6840_3_2	-	SMRU1802
Escherichia coli UMEA 3671-1	1281260	PRJNA186363	186363	Proteobacteria	Gammaproteobacteria	4.96528	50.7	-	AWDV01	10	4992	4696	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885972	GCA_000461515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/515/GCA_000461515.1_Esch_coli_UMEA_3671-1_V1	-	UMEA 3671-1
Mycobacterium tuberculosis KT-0060	1417023	PRJNA226773	226773	Terrabacteria group	Actinobacteria	4.38686	65.6	-	JLNF01	71	4319	4102	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02398708	GCA_000669535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/535/GCA_000669535.1_Myco_tube_KT-0060_V1	-	KT-0060
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.8536	38.1	-	MJTT01	11	2862	2780	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357069	GCA_001752155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/155/GCA_001752155.1_ASM175215v1	-	CFSAN002277
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB7681	266599	Proteobacteria	Gammaproteobacteria	4.86432	52	-	CDLI01	130	5080	4694	12/9/14	2/27/17	Contig	HPA	SAMEA3110714	GCA_000944835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/835/GCA_000944835.1_H125160566_illumina_only.fasta	-	H58
Staphylococcus aureus M1096	1392088	PRJNA217172	217172	Terrabacteria group	Firmicutes	2.818	32.8	-	JCVP01	41	2938	2785	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334696	GCA_000547265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/265/GCA_000547265.1_Stap_aure_M1096_V1	-	M1096
Staphylococcus aureus M1101	1392092	PRJNA217176	217176	Terrabacteria group	Firmicutes	2.89626	32.7	-	JCVQ01	80	3087	2940	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334700	GCA_000547285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/285/GCA_000547285.1_Stap_aure_M1101_V1	-	M1101
Salmonella enterica subsp. enterica serovar Livingstone	260680	PRJNA277757	277757	Proteobacteria	Gammaproteobacteria	4.80321	52.1	-	JZWK01	31	4846	4582	3/18/15	2/27/17	Contig	University of Regina	SAMN03396344	GCA_000956125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/125/GCA_000956125.1_ASM95612v1	26272568	CKY-S4
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.90498	37.9	-	MJTV01	13	2908	2853	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357071	GCA_001752175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/175/GCA_001752175.1_ASM175217v1	-	BCW_2395
Mycobacterium tuberculosis KT-0069	1417027	PRJNA226777	226777	Terrabacteria group	Actinobacteria	4.3784	65.6	-	JLND01	74	4307	4105	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02398712	GCA_000669555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/555/GCA_000669555.1_Myco_tube_KT-0069_V1	-	KT-0069
Escherichia coli UMEA 3682-1	1281261	PRJNA186364	186364	Proteobacteria	Gammaproteobacteria	4.81775	50.8	-	AWDW01	2	4881	4507	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885973	GCA_000461535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/535/GCA_000461535.1_Esch_coli_UMEA_3682-1_V1	-	UMEA 3682-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.1062	39.5	-	CNUD02	187	2273	2081	3/23/15	3/11/17	Contig	SC	SAMEA1032486	GCA_001136065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/065/GCA_001136065.2_6999_5_20	-	210162
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.69258	66.3	-	LSAI01	51	6398	6141	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436517	GCA_001555425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/425/GCA_001555425.1_ASM155542v1	27103710	AU23529
Acinetobacter baumannii	470	PRJNA289430	289430	Proteobacteria	Gammaproteobacteria	4.05869	38.9	-	LGHQ01	79	3957	3823	9/16/15	3/18/17	Contig	The First Affiliated Hospital of Zhejiang Chinese Medical University	SAMN03853645	GCA_001292715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/292/715/GCA_001292715.1_ASM129271v1	-	TCM331
Klebsiella pneumoniae	573	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	5.6536	57.2	-	MPCH01	12	5673	5367	11/10/16	2/21/17	Contig	Centers for Disease Control and Prevention	SAMN04014875	GCA_001875075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/075/GCA_001875075.1_ASM187507v1	-	AR_0034
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15978	64.1	-	FVRN01	8	5269	5085	3/10/17	3/18/17	Scaffold	SC	SAMEA2266554	GCA_900138415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/415/GCA_900138415.1_11893_7_55	-	1168_14
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15985	64.1	-	FVRL01	11	5279	5088	3/10/17	3/18/17	Scaffold	SC	SAMEA2266552	GCA_900138425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/425/GCA_900138425.1_11893_7_53	-	1168_12
Klebsiella pneumoniae	573	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	5.78428	56.7	-	MPCF01	9	5815	5526	11/10/16	2/21/17	Contig	Centers for Disease Control and Prevention	SAMN04014881	GCA_001875105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/105/GCA_001875105.1_ASM187510v1	-	AR_0040
Acinetobacter baumannii	470	PRJNA297501	297501	Proteobacteria	Gammaproteobacteria	3.91465	38.9	-	LKIB01	206	3781	3683	10/20/15	3/18/17	Contig	"Faculte de Medecine, Universite Paris-Sud"	SAMN04124451	GCA_001400975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/975/GCA_001400975.1_ASM140097v1	26659671	MAL
Pseudomonas aeruginosa	287	PRJNA309533	309533	Proteobacteria	Gammaproteobacteria	6.69247	66.3	-	LSAH01	40	6392	6146	2/9/16	3/19/17	Contig	University of Michigan	SAMN04436516	GCA_001555455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/455/GCA_001555455.1_ASM155545v1	27103710	AU17965
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12463	39.5	-	CLQW01	45	2329	2066	3/21/15	3/6/17	Contig	SC	SAMEA1028848	GCA_001136085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/085/GCA_001136085.1_6972_2_10	-	SMRU2554
Escherichia coli UMEA 3687-1	1281262	PRJNA186365	186365	Proteobacteria	Gammaproteobacteria	5.13976	50.6	-	AWDX01	13	5297	4967	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885974	GCA_000461555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/555/GCA_000461555.1_Esch_coli_UMEA_3687-1_V1	-	UMEA 3687-1
Mycobacterium tuberculosis KT-0082	1417029	PRJNA226779	226779	Terrabacteria group	Actinobacteria	4.38015	65.6	-	JLNB01	70	4314	4093	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02398714	GCA_000669575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/575/GCA_000669575.1_Myco_tube_KT-0082_V1	-	KT-0082
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.90869	38.1	-	MJTW01	13	2961	2873	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357073	GCA_001752205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/205/GCA_001752205.1_ASM175220v1	-	CFSAN002281
Salmonella enterica subsp. enterica serovar Heidelberg str. SARA40	1124949	PRJNA78347	78347	Proteobacteria	Gammaproteobacteria	4.79276	52.1	-	AMLQ01	61	4889	4652	3/24/15	2/27/17	Contig	FDA	SAMN01087966	GCA_000961995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/961/995/GCA_000961995.1_ASM96199v1	25479838	SARA40
Staphylococcus aureus M1102	1392093	PRJNA217177	217177	Terrabacteria group	Firmicutes	2.88034	32.8	-	JCVR01	49	3032	2863	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02334701	GCA_000547305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/305/GCA_000547305.1_Stap_aure_M1102_V1	-	M1102
Staphylococcus aureus M1560	1393701	PRJNA217725	217725	Terrabacteria group	Firmicutes	2.8755	32.8	-	JCVS01	62	3049	2883	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02339940	GCA_000547325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/325/GCA_000547325.1_Stap_aure_M1560_V1	-	M1560
Salmonella enterica subsp. enterica serovar Heidelberg str. SARA36	925125	PRJNA59985	59985	Proteobacteria	Gammaproteobacteria	4.99962	52	-	AMLS01	546	5385	4793	3/24/15	2/27/17	Contig	FDA	SAMN01087968	GCA_000962005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/005/GCA_000962005.1_ASM96200v1	-	SARA36
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.04136	37.9	-	MJTX01	21	3070	2999	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357074	GCA_001752225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/225/GCA_001752225.1_ASM175222v1	-	CFSAN002283
Mycobacterium tuberculosis KT-0086	1417030	PRJNA226780	226780	Terrabacteria group	Actinobacteria	4.38047	65.6	-	JLNA01	4	4271	4095	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02398715	GCA_000669595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/595/GCA_000669595.1_Myco_tube_KT-0086_V1	-	KT-0086
Escherichia coli UMEA 3694-1	1281264	PRJNA186367	186367	Proteobacteria	Gammaproteobacteria	5.16361	50.5	-	AWDY01	8	5302	4959	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885976	GCA_000461575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/575/GCA_000461575.1_Esch_coli_UMEA_3694-1_V1	-	UMEA 3694-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.10792	39.6	-	CNTZ02	166	2279	2079	3/23/15	3/11/17	Contig	SC	SAMEA1032695	GCA_001136145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/145/GCA_001136145.2_6999_5_2	-	148056
Pseudomonas aeruginosa	287	PRJNA307669	307669	Proteobacteria	Gammaproteobacteria	6.26869	66.6	-	LQQN01	70	5952	5805	4/13/16	3/20/17	Contig	University of Malaya	SAMN04384581	GCA_001619935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/935/GCA_001619935.1_ASM161993v1	-	M7
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.0995	38.8	-	LLFA01	117	4115	3795	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145666	GCA_001414565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/565/GCA_001414565.1_ASM141456v1	-	ABBL055
Klebsiella pneumoniae	573	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	6.10261	56.5	-	MPCE01	25	6226	5819	11/10/16	2/21/17	Contig	Centers for Disease Control and Prevention	SAMN04014882	GCA_001875125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/125/GCA_001875125.1_ASM187512v1	-	AR_0041
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15913	64.1	-	FVRO01	7	5271	5082	3/10/17	3/18/17	Scaffold	SC	SAMEA2266555	GCA_900138435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/435/GCA_900138435.1_11893_7_56	-	1168_15
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15962	64.1	-	FVRQ01	8	5268	5087	3/10/17	3/18/17	Scaffold	SC	SAMEA2266558	GCA_900138445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/445/GCA_900138445.1_11893_7_59	-	1168_18
Klebsiella pneumoniae	573	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	5.54361	57.1	-	MPCB01	10	5597	5264	11/10/16	2/21/17	Contig	Centers for Disease Control and Prevention	SAMN04014885	GCA_001875135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/135/GCA_001875135.1_ASM187513v1	-	AR_0044
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.0224	38.8	-	LLFC01	110	3952	3776	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145668	GCA_001414575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/575/GCA_001414575.1_ASM141457v1	-	ABBL057
Pseudomonas aeruginosa	287	PRJNA322303	322303	Proteobacteria	Gammaproteobacteria	6.7504	66.1	-	LYLY01	80	6479	6241	7/6/16	3/20/17	Contig	University of Sao Paulo	SAMN05150790	GCA_001679905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/905/GCA_001679905.1_ASM167990v1	-	ET02
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06904	39.6	-	CNTV02	163	2250	2040	3/22/15	3/11/17	Contig	SC	SAMEA1032518	GCA_001136165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/165/GCA_001136165.2_6999_5_13	-	179743
Escherichia coli UMEA 3702-1	1281265	PRJNA186368	186368	Proteobacteria	Gammaproteobacteria	5.07278	50.4	-	AWDZ01	10	5212	4872	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885977	GCA_000461595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/595/GCA_000461595.1_Esch_coli_UMEA_3702-1_V1	-	UMEA 3702-1
Mycobacterium tuberculosis KT-0087	1417031	PRJNA226781	226781	Terrabacteria group	Actinobacteria	4.39114	65.6	-	JLMZ01	69	4320	4115	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02398716	GCA_000669615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/615/GCA_000669615.1_Myco_tube_KT-0087_V1	-	KT-0087
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.96281	37.9	-	MJTY01	18	2998	2918	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357075	GCA_001752245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/245/GCA_001752245.1_ASM175224v1	-	CFSAN002284
Salmonella enterica subsp. enterica serovar Heidelberg str. RI-11-013193	1030000	PRJNA66697	66697	Proteobacteria	Gammaproteobacteria	4.75468	52.1	-	AMLW01	299	4983	4543	3/24/15	2/27/17	Contig	FDA	SAMN01087972	GCA_000962015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/015/GCA_000962015.1_ASM96201v1	25479838	RI-11-013193
Staphylococcus aureus M1562	1393703	PRJNA217727	217727	Terrabacteria group	Firmicutes	2.86222	32.9	-	JCVT01	39	3018	2846	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02339942	GCA_000547345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/345/GCA_000547345.1_Stap_aure_M1562_V1	-	M1562
Staphylococcus aureus M1566	1393704	PRJNA217728	217728	Terrabacteria group	Firmicutes	2.82195	32.8	-	JCVU01	35	2959	2808	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02339943	GCA_000547365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/365/GCA_000547365.1_Stap_aure_M1566_V1	-	M1566
Salmonella enterica subsp. enterica serovar Heidelberg str. 607309-5	1030002	PRJNA66701	66701	Proteobacteria	Gammaproteobacteria	4.75353	52.1	-	AMLY01	79	4859	4577	3/24/15	2/27/17	Contig	FDA	SAMN01087974	GCA_000962025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/025/GCA_000962025.1_ASM96202v1	-	607309-5
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.79421	38.1	-	MJTZ01	13	2835	2755	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357076	GCA_001752255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/255/GCA_001752255.1_ASM175225v1	-	CFSAN002285
Mycobacterium tuberculosis XDR KZN 605	1417005	PRJNA227148	227148	Terrabacteria group	Actinobacteria	4.40337	65.6	-	JLCQ01	1	4277	4115	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02400338	GCA_000669635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/635/GCA_000669635.1_Myco_tube_XDR_KZN_605_V1	-	XDR KZN 605
Escherichia coli UMEA 3703-1	1281266	PRJNA186369	186369	Proteobacteria	Gammaproteobacteria	5.10674	50.6	-	AWEA01	17	5213	4877	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885978	GCA_000461615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/615/GCA_000461615.1_Esch_coli_UMEA_3703-1_V1	-	UMEA 3703-1
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.01849	39.6	-	CLCS01	80	2212	1989	3/21/15	3/4/17	Contig	SC	SAMEA1026004	GCA_001136185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/185/GCA_001136185.1_6899_4_12	-	SMRU2028
Pseudomonas aeruginosa	287	PRJNA324083	324083	Proteobacteria	Gammaproteobacteria	6.77755	66	-	LZDA01	95	6525	6285	7/6/16	3/20/17	Contig	Adolfo Lutz Institute	SAMN05194774	GCA_001680745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/745/GCA_001680745.1_ASM168074v1	-	Pa538
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.04	39.1	-	LLFF01	218	3969	3766	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145671	GCA_001414645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/645/GCA_001414645.1_ASM141464v1	-	ABBL060
Klebsiella pneumoniae	573	PRJNA326255	326255	Proteobacteria	Gammaproteobacteria	4.80741	58.2	-	MOXK01	137	4779	4560	11/10/16	2/21/17	Contig	"Assam University, Silchar"	SAMN05272522	GCA_001876675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/876/675/GCA_001876675.1_ASM187667v1	-	AWD5
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15775	64.1	-	FVRR01	14	5270	5086	3/10/17	3/18/17	Scaffold	SC	SAMEA2266557	GCA_900138455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/455/GCA_900138455.1_11893_7_58	-	1168_17
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16075	64.1	-	FVRP01	9	5268	5081	3/10/17	3/18/17	Scaffold	SC	SAMEA2266556	GCA_900138465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/465/GCA_900138465.1_11893_7_57	-	1168_16
Klebsiella pneumoniae	573	PRJNA298912	298912	Proteobacteria	Gammaproteobacteria	5.62847	57	-	LLWU01	219	5807	5444	11/18/16	2/21/17	Contig	Calgary Laboratory Services	SAMN04168651	GCA_001884315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/315/GCA_001884315.1_ASM188431v1	27284091	KpN03
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.96087	38.9	-	LLFG01	93	3889	3650	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145672	GCA_001414655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/655/GCA_001414655.1_ASM141465v1	-	ABBL061
Pseudomonas aeruginosa	287	PRJNA321098	321098	Proteobacteria	Gammaproteobacteria	7.08442	65.7	-	MKEL01	691	7218	6347	9/30/16	3/20/17	Contig	"Zhongshan School of Medicine, Sun Yat-sen University"	SAMN04966045	GCA_001750205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/205/GCA_001750205.1_ASM175020v1	-	PA12GY72
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.12244	39.5	-	CPNW01	52	2340	2089	3/23/15	3/4/17	Contig	SC	SAMEA1020855	GCA_001136245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/245/GCA_001136245.1_6678_3_18	-	SN34677
Escherichia coli UMEA 3705-1	1281267	PRJNA186370	186370	Proteobacteria	Gammaproteobacteria	5.21988	50.5	-	AWEB01	17	5347	5014	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885979	GCA_000461635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/635/GCA_000461635.1_Esch_coli_UMEA_3705-1_V1	-	UMEA 3705-1
Mycobacterium tuberculosis KZN 4207	478433	PRJNA227149	227149	Terrabacteria group	Actinobacteria	4.39509	65.6	-	JLCP01	1	4267	4105	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02400339	GCA_000669655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/655/GCA_000669655.1_Myco_tube_KZN_4207_V1	-	KZN 4207
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.02122	37.8	-	MJUA01	25	3072	2999	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357077	GCA_001752285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/285/GCA_001752285.1_ASM175228v1	-	CFSAN002286
Salmonella enterica subsp. enterica serovar Heidelberg str. 607309-34	1030004	PRJNA66705	66705	Proteobacteria	Gammaproteobacteria	4.74484	52.1	-	AMLZ01	46	4841	4585	3/24/15	2/27/17	Contig	FDA	SAMN01087976	GCA_000962075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/075/GCA_000962075.1_ASM96207v1	25479838	607309-34
Staphylococcus aureus M1567	1393705	PRJNA217729	217729	Terrabacteria group	Firmicutes	2.8753	32.9	-	JCVV01	46	3038	2878	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02339944	GCA_000547385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/385/GCA_000547385.1_Stap_aure_M1567_V1	-	M1567
Staphylococcus aureus M1569	1393706	PRJNA217730	217730	Terrabacteria group	Firmicutes	2.87576	32.9	-	JCVW01	46	3051	2878	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02339945	GCA_000547405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/405/GCA_000547405.1_Stap_aure_M1569_V1	-	M1569
Salmonella enterica subsp. enterica serovar Heidelberg str. 632675-24	1054948	PRJNA69891	69891	Proteobacteria	Gammaproteobacteria	4.74703	52.1	-	AMMA01	62	4839	4591	3/24/15	2/27/17	Contig	FDA	SAMN01087977	GCA_000962085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/085/GCA_000962085.1_ASM96208v1	25479838	632675-24
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.96236	37.8	-	MJUB01	23	3008	2930	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357078	GCA_001752305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/305/GCA_001752305.1_ASM175230v1	-	BCW_2403
Mycobacterium tuberculosis KZN 1435	478434	PRJNA227150	227150	Terrabacteria group	Actinobacteria	4.40184	65.6	-	JLCO01	1	4278	4119	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02400340	GCA_000669675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/675/GCA_000669675.1_Myco_tube_KZN_1435_V1	-	KZN 1435
Escherichia coli UMEA 3707-1	1281268	PRJNA186371	186371	Proteobacteria	Gammaproteobacteria	5.25318	50.4	-	AWEC01	18	5377	5022	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885980	GCA_000461655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/655/GCA_000461655.1_Esch_coli_UMEA_3707-1_V1	-	UMEA 3707-1
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.06655	39.7	-	CMGX01	53	2268	2050	3/22/15	3/4/17	Contig	SC	SAMEA1029341	GCA_001136285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/285/GCA_001136285.1_7038_5_16	-	SMRU2968
Pseudomonas aeruginosa	287	PRJNA321097	321097	Proteobacteria	Gammaproteobacteria	6.84227	65.8	-	MKEM01	439	6830	6234	9/30/16	3/20/17	Contig	"Zhongshan School of Medicine, Sun Yat-sen University"	SAMN04966046	GCA_001750225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/225/GCA_001750225.1_ASM175022v1	-	PA13SY16
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.68358	39	-	LLFI01	273	3774	3270	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145674	GCA_001414685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/685/GCA_001414685.1_ASM141468v1	-	ABBL063
Klebsiella pneumoniae	573	PRJNA298912	298912	Proteobacteria	Gammaproteobacteria	5.60435	57.1	-	LLWX01	128	5753	5427	11/18/16	2/21/17	Contig	Calgary Laboratory Services	SAMN04168655	GCA_001884325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/325/GCA_001884325.1_ASM188432v1	27284091	KpN07
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16078	64.1	-	FVRS01	7	5266	5083	3/10/17	3/18/17	Scaffold	SC	SAMEA2266559	GCA_900138475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/475/GCA_900138475.1_11893_7_60	-	1168_19
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16015	64.1	-	FVRT01	7	5271	5089	3/10/17	3/18/17	Scaffold	SC	SAMEA2266568	GCA_900138485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/485/GCA_900138485.1_11893_7_68	-	1168_20
Klebsiella pneumoniae	573	PRJNA298912	298912	Proteobacteria	Gammaproteobacteria	5.63495	57	-	LLWT01	167	5775	5450	11/18/16	2/21/17	Contig	Calgary Laboratory Services	SAMN04168650	GCA_001884335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/335/GCA_001884335.1_ASM188433v1	27284091	KpN02
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.31929	39.1	-	LLFL01	76	4246	4006	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145677	GCA_001414735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/735/GCA_001414735.1_ASM141473v1	-	ABBL066
Pseudomonas aeruginosa	287	PRJNA321099	321099	Proteobacteria	Gammaproteobacteria	7.33311	65.5	-	MKEO01	1418	7789	6107	9/30/16	4/2/17	Contig	"Zhongshan School of Medicine, Sun Yat-sen University"	SAMN04966044	GCA_001750425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/425/GCA_001750425.1_ASM175042v1	-	M140A
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.2306	39.4	-	CMQE01	68	2468	2202	3/23/15	3/4/17	Contig	SC	SAMEA2061944	GCA_001136305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/305/GCA_001136305.1_9803_7_83	-	6B
Escherichia coli UMEA 3718-1	1281269	PRJNA186372	186372	Proteobacteria	Gammaproteobacteria	5.4864	50.6	-	AWED01	15	5599	5248	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885981	GCA_000461675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/675/GCA_000461675.1_Esch_coli_UMEA_3718-1_V1	-	UMEA 3718-1
Mycobacterium tuberculosis OFXR-28	1418250	PRJNA227749	227749	Terrabacteria group	Actinobacteria	4.41394	65.6	-	JLBN01	6	4296	4135	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02402660	GCA_000669695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/695/GCA_000669695.1_Myco_tube_OFXR-28_V1	-	OFXR-28
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.93417	37.8	-	MJUC01	13	3012	2922	9/30/16	3/1/17	Scaffold	University of California at Davis	SAMN03357079	GCA_001752325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/325/GCA_001752325.1_ASM175232v1	-	CFSAN002288
Salmonella enterica subsp. enterica serovar Heidelberg str. 670102-5	1030007	PRJNA66711	66711	Proteobacteria	Gammaproteobacteria	4.76147	52.1	-	AMMD01	192	4919	4593	3/24/15	2/27/17	Contig	FDA	SAMN01087980	GCA_000962115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/115/GCA_000962115.1_ASM96211v1	25479838	670102-5
Staphylococcus aureus M1570	1393707	PRJNA217731	217731	Terrabacteria group	Firmicutes	2.85865	32.8	-	JCVX01	31	3029	2872	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02339946	GCA_000547425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/425/GCA_000547425.1_Stap_aure_M1570_V1	-	M1570
Staphylococcus aureus M1571	1393708	PRJNA217732	217732	Terrabacteria group	Firmicutes	2.86607	32.8	-	JCVY01	37	3014	2866	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02339947	GCA_000547445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/445/GCA_000547445.1_Stap_aure_M1571_V1	-	M1571
Salmonella enterica subsp. enterica serovar Heidelberg str. 622737-21	1054961	PRJNA69865	69865	Proteobacteria	Gammaproteobacteria	4.73137	52.1	-	AMMR01	147	4887	4552	3/24/15	2/27/17	Contig	FDA	SAMN01087998	GCA_000962295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/295/GCA_000962295.1_ASM96229v1	25479838	622737-21
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.99331	37.8	-	MJCH01	15	3072	2988	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03357083	GCA_001758825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/825/GCA_001758825.1_ASM175882v1	-	CFSAN002292
Mycobacterium tuberculosis CDC1551	83331	PRJNA227750	227750	Terrabacteria group	Actinobacteria	4.40681	65.6	-	JLBH01	2	4276	4127	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02402661	GCA_000669715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/715/GCA_000669715.1_Myco_tube_cdc1551_V1	-	cdc1551
Escherichia coli UMEA 3805-1	1281270	PRJNA186373	186373	Proteobacteria	Gammaproteobacteria	5.10502	50.7	-	AWEE01	16	5232	4916	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885982	GCA_000461695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/695/GCA_000461695.1_Esch_coli_UMEA_3805-1_V1	-	UMEA 3805-1
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11565	39.7	-	CKNW01	48	2277	1975	3/21/15	3/15/17	Contig	SC	SAMEA1023972	GCA_001136325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/325/GCA_001136325.1_6664_1_5	-	type strain: N
Pseudomonas aeruginosa	287	PRJNA294726	294726	Proteobacteria	Gammaproteobacteria	6.84681	66	-	LZQE01	49	6653	6436	10/11/16	3/20/17	Contig	Technical University of Denmark	SAMN04029213	GCA_001756355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/355/GCA_001756355.1_ASM175635v1	-	Lo049
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.03394	39	-	LLFM01	82	4000	3755	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145678	GCA_001414765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/765/GCA_001414765.1_ASM141476v1	-	ABBL067
Klebsiella pneumoniae	573	PRJNA298912	298912	Proteobacteria	Gammaproteobacteria	5.57533	57.1	-	LLWY01	117	5714	5403	11/18/16	2/21/17	Contig	Calgary Laboratory Services	SAMN04168660	GCA_001884385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/385/GCA_001884385.1_ASM188438v1	27284091	KpN08
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16188	64.1	-	FVRU01	3	5258	5090	3/10/17	3/18/17	Scaffold	SC	SAMEA2376774	GCA_900138505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/505/GCA_900138505.1_12454_1_92	-	1177
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.8278	64.2	-	FVRY01	9	4765	4620	3/10/17	3/18/17	Scaffold	SC	SAMEA4008290	GCA_900138515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/515/GCA_900138515.1_20034_1_1	-	aerosol_1
Klebsiella pneumoniae	573	PRJNA298912	298912	Proteobacteria	Gammaproteobacteria	5.57644	57	-	LLWV01	279	5831	5397	11/18/16	2/21/17	Contig	Calgary Laboratory Services	SAMN04168652	GCA_001884395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/395/GCA_001884395.1_ASM188439v1	27284091	KpN04
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.00716	39	-	LLFN01	362	3895	3687	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145679	GCA_001414785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/785/GCA_001414785.1_ASM141478v1	-	ABBL067a
Pseudomonas aeruginosa	287	PRJNA294726	294726	Proteobacteria	Gammaproteobacteria	7.43982	65.5	-	LZQI01	99	7336	7019	10/11/16	3/20/17	Contig	Technical University of Denmark	SAMN04029214	GCA_001756405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/405/GCA_001756405.1_ASM175640v1	-	Br993
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00244	39.7	-	CNZT02	253	2110	1956	3/23/15	3/5/17	Contig	SC	SAMEA1463151	GCA_001136345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/345/GCA_001136345.2_7553_5_83	-	PT8064
Escherichia coli UMEA 3821-1	1281271	PRJNA186374	186374	Proteobacteria	Gammaproteobacteria	5.24099	50.5	-	AWEF01	17	5350	5008	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885983	GCA_000461715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/715/GCA_000461715.1_Esch_coli_UMEA_3821-1_V1	-	UMEA 3821-1
Mycobacterium tuberculosis 38765	1418251	PRJNA227751	227751	Terrabacteria group	Actinobacteria	4.39951	65.6	-	JLBF01	93	4333	4132	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02402662	GCA_000669735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/735/GCA_000669735.1_Myco_tube_38765_V1	-	38765
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.898	37.9	-	MJCF01	20	2894	2824	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03357081	GCA_001758835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/835/GCA_001758835.1_ASM175883v1	-	BCW_2406
Salmonella enterica subsp. enterica serovar Heidelberg str. 579083-10	1054962	PRJNA69863	69863	Proteobacteria	Gammaproteobacteria	4.83681	52.1	-	AMMS01	338	5134	4618	3/24/15	2/27/17	Contig	FDA	SAMN01087999	GCA_000962315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/315/GCA_000962315.1_ASM96231v1	-	579083-10
Staphylococcus aureus M1572	1393709	PRJNA217733	217733	Terrabacteria group	Firmicutes	2.88754	32.8	-	JCVZ01	45	3055	2889	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02339948	GCA_000547465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/465/GCA_000547465.1_Stap_aure_M1572_V1	-	M1572
Staphylococcus aureus M1573	1393710	PRJNA217734	217734	Terrabacteria group	Firmicutes	2.86285	32.8	-	JCWA01	38	2996	2869	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02339949	GCA_000547485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/485/GCA_000547485.1_Stap_aure_M1573_V1	-	M1573
Salmonella enterica subsp. enterica serovar Heidelberg str. 670102-3	1054964	PRJNA69859	69859	Proteobacteria	Gammaproteobacteria	4.70876	52.2	-	AMMU01	432	5006	4457	3/24/15	2/27/17	Contig	FDA	SAMN01088001	GCA_000962355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/355/GCA_000962355.1_ASM96235v1	25479838	670102-3
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.04864	37.8	-	MJCG01	22	3129	3032	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03357082	GCA_001758845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/845/GCA_001758845.1_ASM175884v1	-	CFSAN002291
Mycobacterium tuberculosis 49375	1418252	PRJNA227752	227752	Terrabacteria group	Actinobacteria	4.38948	65.6	-	JLBE01	88	4320	4115	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02402663	GCA_000669755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/755/GCA_000669755.1_Myco_tube_49375_V1	-	49375
Escherichia coli UMEA 3834-1	1281272	PRJNA186375	186375	Proteobacteria	Gammaproteobacteria	5.37562	50.6	-	AWEG01	15	5603	5227	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885984	GCA_000461735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/735/GCA_000461735.1_Esch_coli_UMEA_3834-1_V1	-	UMEA 3834-1
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.20604	39.5	-	CMDA01	111	2419	2195	3/21/15	3/4/17	Contig	SC	SAMEA1029154	GCA_001136365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/365/GCA_001136365.1_7011_3_16	-	38
Pseudomonas aeruginosa	287	PRJNA294726	294726	Proteobacteria	Gammaproteobacteria	6.8921	66	-	LZQJ01	206	6610	6358	10/11/16	3/20/17	Contig	Technical University of Denmark	SAMN04029212	GCA_001756435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/435/GCA_001756435.1_ASM175643v1	-	W15Dec3
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.07356	39.1	-	LLFO01	396	3990	3744	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145680	GCA_001414805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/805/GCA_001414805.1_ASM141480v1	-	ABBL067b
Klebsiella pneumoniae	573	PRJNA298912	298912	Proteobacteria	Gammaproteobacteria	5.60355	57.1	-	LLWW01	125	5752	5438	11/18/16	2/21/17	Contig	Calgary Laboratory Services	SAMN04168653	GCA_001884415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/415/GCA_001884415.1_ASM188441v1	27284091	KpN05
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82843	64.2	-	FVSA01	11	4765	4625	3/10/17	3/18/17	Scaffold	SC	SAMEA4008308	GCA_900138525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/525/GCA_900138525.1_20034_1_19	-	aerosol_Sputum_1
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16188	64.1	-	FVRW01	4	5257	5089	3/10/17	3/18/17	Scaffold	SC	SAMEA2518390	GCA_900138535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/535/GCA_900138535.1_13109_1_72	-	Room_15_sink
Klebsiella pneumoniae	573	PRJNA298912	298912	Proteobacteria	Gammaproteobacteria	5.63493	57	-	LLXA01	159	5763	5443	11/18/16	2/21/17	Contig	Calgary Laboratory Services	SAMN04168662	GCA_001884425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/425/GCA_001884425.1_ASM188442v1	27284091	KpN10
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.014	38.9	-	LLFB01	89	3950	3675	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145667	GCA_001414815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/815/GCA_001414815.1_ASM141481v1	-	ABBL056
Pseudomonas aeruginosa	287	PRJNA294726	294726	Proteobacteria	Gammaproteobacteria	6.47605	66.4	-	LZQF01	38	6167	5993	10/11/16	3/20/17	Contig	Technical University of Denmark	SAMN04029211	GCA_001756445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/445/GCA_001756445.1_ASM175644v1	-	PHLS08959
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.05645	39.7	-	CMCW01	50	2244	2005	3/21/15	3/10/17	Contig	SC	SAMEA1029318	GCA_001136405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/405/GCA_001136405.1_7004_8_90	-	SMRU2922
Escherichia coli UMEA 3889-1	1281273	PRJNA186376	186376	Proteobacteria	Gammaproteobacteria	4.73492	50.7	-	AWEH01	9	4863	4537	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885985	GCA_000461755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/755/GCA_000461755.1_Esch_coli_UMEA_3889-1_V1	-	UMEA 3889-1
Mycobacterium tuberculosis 44503	1418253	PRJNA227753	227753	Terrabacteria group	Actinobacteria	4.3926	65.6	-	JLBD01	84	4324	4118	4/29/14	3/9/17	Scaffold	Broad Institute	SAMN02402664	GCA_000669775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/775/GCA_000669775.1_Myco_tube_44503_V1	-	44503
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.88251	38	-	MJCE01	12	2915	2847	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03357080	GCA_001758855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/855/GCA_001758855.1_ASM175885v1	-	BCW_2405
Salmonella enterica subsp. enterica serovar Heidelberg str. 83-1068	1173840	PRJNA161419	161419	Proteobacteria	Gammaproteobacteria	4.77402	52.1	-	AMOB01	189	4983	4497	3/24/15	2/27/17	Contig	FDA	SAMN01088034	GCA_000962445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/445/GCA_000962445.1_ASM96244v1	-	83-1068
Staphylococcus aureus M1574	1393711	PRJNA217735	217735	Terrabacteria group	Firmicutes	2.92039	32.9	-	JCWB01	64	3091	2905	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02339950	GCA_000547505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/505/GCA_000547505.1_Stap_aure_M1574_V1	-	M1574
Staphylococcus aureus M1575	1393712	PRJNA217736	217736	Terrabacteria group	Firmicutes	2.86157	32.9	-	JCWC01	41	3001	2840	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02339951	GCA_000547525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/525/GCA_000547525.1_Stap_aure_M1575_V1	-	M1575
Salmonella enterica subsp. enterica serovar Heidelberg str. 86-0255	1173843	PRJNA161425	161425	Proteobacteria	Gammaproteobacteria	4.7425	52.1	-	AMOE01	118	4910	4490	3/24/15	2/27/17	Contig	FDA	SAMN01088037	GCA_000962475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/475/GCA_000962475.1_ASM96247v1	-	86-0255
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.97752	37.9	-	MJCI01	20	3026	2953	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03357084	GCA_001758905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/905/GCA_001758905.1_ASM175890v1	-	BCW_2409
Mycobacterium tuberculosis 51628	1418254	PRJNA227754	227754	Terrabacteria group	Actinobacteria	4.3951	65.6	-	JLBC01	69	4325	4134	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02402665	GCA_000669795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/795/GCA_000669795.1_Myco_tube_51628_V1	-	51628
Escherichia coli UMEA 3893-1	1281274	PRJNA186377	186377	Proteobacteria	Gammaproteobacteria	5.08747	50.6	-	AWEI01	9	5278	4972	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885986	GCA_000461775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/775/GCA_000461775.1_Esch_coli_UMEA_3893-1_V1	-	UMEA 3893-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04669	39.7	-	COBR02	251	2203	2015	3/23/15	3/11/17	Contig	SC	SAMEA1463206	GCA_001136505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/505/GCA_001136505.2_7622_2_7	-	BR1022-1
Pseudomonas aeruginosa	287	PRJNA294726	294726	Proteobacteria	Gammaproteobacteria	7.12379	65.8	-	LZQH01	55	6911	6628	10/11/16	3/20/17	Contig	Technical University of Denmark	SAMN04029215	GCA_001756495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/495/GCA_001756495.1_ASM175649v1	26396243	1709-12
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.01088	38.6	-	LLFD01	122	4087	3744	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145669	GCA_001414835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/835/GCA_001414835.1_ASM141483v1	-	ABBL058
Klebsiella pneumoniae	573	PRJNA298912	298912	Proteobacteria	Gammaproteobacteria	5.60408	57.1	-	LLWZ01	122	5742	5427	11/18/16	2/21/17	Contig	Calgary Laboratory Services	SAMN04168661	GCA_001884465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/465/GCA_001884465.1_ASM188446v1	27284091	KpN09
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82634	64.2	-	FVRX01	8	4764	4621	3/10/17	3/18/17	Scaffold	SC	SAMEA4008299	GCA_900138545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/545/GCA_900138545.1_20034_1_10	-	aerosol_13
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82652	64.1	-	FVRZ01	9	4762	4622	3/10/17	3/18/17	Scaffold	SC	SAMEA4008300	GCA_900138555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/555/GCA_900138555.1_20034_1_11	-	aerosol_14
Klebsiella pneumoniae	573	PRJNA298912	298912	Proteobacteria	Gammaproteobacteria	5.64335	57.1	-	LLXB01	154	5765	5454	11/18/16	2/21/17	Contig	Calgary Laboratory Services	SAMN04168689	GCA_001884485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/485/GCA_001884485.1_ASM188448v1	27284091	KpN11
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.87067	39	-	LLFH01	70	3775	3571	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145673	GCA_001414865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/865/GCA_001414865.1_ASM141486v1	-	ABBL062
Pseudomonas aeruginosa	287	PRJNA294726	294726	Proteobacteria	Gammaproteobacteria	6.84462	65.9	-	LZTN01	51	6555	6315	10/11/16	3/20/17	Contig	Technical University of Denmark	SAMN04029207	GCA_001756515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/515/GCA_001756515.1_ASM175651v1	-	HPA 17
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10426	39.5	-	CLYD01	59	2320	2100	3/21/15	3/11/17	Contig	SC	SAMEA1028638	GCA_001136525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/525/GCA_001136525.1_6983_6_46	-	23F
Escherichia coli UMEA 3899-1	1281275	PRJNA186378	186378	Proteobacteria	Gammaproteobacteria	5.53456	50.4	-	AWEJ01	36	5710	5236	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885987	GCA_000461795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/795/GCA_000461795.1_Esch_coli_UMEA_3899-1_V1	-	UMEA 3899-1
Mycobacterium tuberculosis 38088	1418255	PRJNA227755	227755	Terrabacteria group	Actinobacteria	4.38863	65.6	-	JLBB01	91	4330	4112	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02402666	GCA_000669815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/815/GCA_000669815.1_Myco_tube_38088_V1	-	38088
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.86188	38.1	-	MJCJ01	9	2889	2793	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03357085	GCA_001758915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/915/GCA_001758915.1_ASM175891v1	-	CFSAN002295
Salmonella enterica subsp. enterica serovar Heidelberg str. 87-0208	1173844	PRJNA161427	161427	Proteobacteria	Gammaproteobacteria	4.74541	52.1	-	AMOF01	81	4866	4500	3/24/15	2/27/17	Contig	FDA	SAMN01088038	GCA_000962485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/485/GCA_000962485.1_ASM96248v1	-	87-0208
Staphylococcus aureus M1576	1393713	PRJNA217737	217737	Terrabacteria group	Firmicutes	2.87017	32.9	-	JCWD01	43	3016	2857	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02339952	GCA_000547545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/545/GCA_000547545.1_Stap_aure_M1576_V1	-	M1576
Staphylococcus aureus M1577	1393714	PRJNA217738	217738	Terrabacteria group	Firmicutes	2.83329	32.8	-	JCWE01	33	2989	2819	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02339953	GCA_000547565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/565/GCA_000547565.1_Stap_aure_M1577_V1	-	M1577
Salmonella enterica subsp. enterica serovar Heidelberg str. 88-0312	1173845	PRJNA161429	161429	Proteobacteria	Gammaproteobacteria	4.69616	52.1	-	AMOG01	168	4862	4415	3/24/15	2/27/17	Contig	FDA	SAMN01088039	GCA_000962515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/515/GCA_000962515.1_ASM96251v1	-	88-0312
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.12937	37.9	-	MJCK01	35	3236	3112	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03357086	GCA_001758935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/935/GCA_001758935.1_ASM175893v1	-	CFSAN002296
Mycobacterium tuberculosis 36361	1418256	PRJNA227756	227756	Terrabacteria group	Actinobacteria	4.40717	65.6	-	JLBA01	69	4329	4123	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02402667	GCA_000669835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/835/GCA_000669835.1_Myco_tube_36361_V1	-	36361
Escherichia coli UMEA 3955-1	1281276	PRJNA186379	186379	Proteobacteria	Gammaproteobacteria	5.41711	50.6	-	AWEK01	16	5560	5199	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885988	GCA_000461815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/815/GCA_000461815.1_Esch_coli_UMEA_3955-1_V1	-	UMEA 3955-1
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.06242	39.5	-	CKQY01	57	2269	2052	3/21/15	3/11/17	Contig	SC	SAMEA1025074	GCA_001136545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/545/GCA_001136545.1_6680_7_11	-	SMRU971
Pseudomonas aeruginosa	287	PRJNA294726	294726	Proteobacteria	Gammaproteobacteria	6.89991	66	-	LZTM01	86	6728	6385	10/11/16	3/20/17	Contig	Technical University of Denmark	SAMN04029208	GCA_001756525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/525/GCA_001756525.1_ASM175652v1	-	Li010
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.03399	39.1	-	LLFP01	456	3923	3715	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145681	GCA_001414885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/885/GCA_001414885.1_ASM141488v1	-	ABBL067c
Klebsiella pneumoniae	573	PRJNA341925	341925	Proteobacteria	Gammaproteobacteria	5.73751	57.1	-	MIFX01	147	5930	5652	11/20/16	2/21/17	Contig	University of Florence	SAMN05730643	GCA_001884765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/765/GCA_001884765.1_ASM188476v1	-	KP04C62
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82643	64.1	-	FVSB01	6	4768	4619	3/10/17	3/18/17	Scaffold	SC	SAMEA4008301	GCA_900138575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/575/GCA_900138575.1_20034_1_12	-	aerosol_15
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82669	64.2	-	FVSD01	8	4765	4623	3/10/17	3/18/17	Scaffold	SC	SAMEA4008305	GCA_900138585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/585/GCA_900138585.1_20034_1_16	-	aerosol_19
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.5824	57.3	-	MPOC01	150	5689	5440	12/1/16	2/21/17	Contig	"West China Hospital, Sichuan University"	SAMN06019522	GCA_001887985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/985/GCA_001887985.1_ASM188798v1	-	WCHKP649
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.99828	39.2	-	LLFR01	530	3885	3667	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145683	GCA_001414905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/905/GCA_001414905.1_ASM141490v1	-	ABBL067f
Pseudomonas aeruginosa	287	PRJNA294726	294726	Proteobacteria	Gammaproteobacteria	7.23105	65.7	-	LZTO01	73	7007	6748	10/11/16	3/20/17	Contig	Technical University of Denmark	SAMN04029206	GCA_001756585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/585/GCA_001756585.1_ASM175658v1	-	HPA 4
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14262	39.5	-	CKOL01	51	2358	2136	3/21/15	3/11/17	Contig	SC	SAMEA1024045	GCA_001136625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/625/GCA_001136625.1_6673_8_4	-	SMRU244
Escherichia coli UMEA 4075-1	1281277	PRJNA186380	186380	Proteobacteria	Gammaproteobacteria	5.22425	50.3	-	AWEL01	9	5300	4943	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885989	GCA_000461835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/835/GCA_000461835.1_Esch_coli_UMEA_4075-1_V1	-	UMEA 4075-1
Mycobacterium tuberculosis TB_RSA01	1421917	PRJNA227995	227995	Terrabacteria group	Actinobacteria	4.39624	65.6	-	JKXL01	17	4285	4103	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403442	GCA_000669855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/855/GCA_000669855.1_Myco_tube_TB_RSA01_V1	-	TB_RSA01
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.97795	37.8	-	MJCL01	27	3032	2953	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03357087	GCA_001758945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/945/GCA_001758945.1_ASM175894v1	-	CFSAN002297
Salmonella enterica subsp. enterica serovar Heidelberg str. 89-0213	1173846	PRJNA161431	161431	Proteobacteria	Gammaproteobacteria	4.75168	52.1	-	AMOH01	42	4849	4597	3/24/15	2/27/17	Contig	FDA	SAMN01088040	GCA_000962525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/525/GCA_000962525.1_ASM96252v1	-	89-0213
Staphylococcus aureus M1580	1393716	PRJNA217740	217740	Terrabacteria group	Firmicutes	2.83712	32.8	-	JCWF01	37	2993	2834	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02339955	GCA_000547585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/585/GCA_000547585.1_Stap_aure_M1580_V1	-	M1580
Staphylococcus aureus M0747	1393717	PRJNA217741	217741	Terrabacteria group	Firmicutes	2.85959	32.8	-	JCWG01	37	3029	2867	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02339956	GCA_000547605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/605/GCA_000547605.1_Stap_aure_M0747_V1	-	M0747
Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN00327	1182169	PRJNA162795	162795	Proteobacteria	Gammaproteobacteria	4.82026	52	-	AMON01	79	4942	4662	3/24/15	2/27/17	Contig	FDA	SAMN01088049	GCA_000962555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/555/GCA_000962555.1_ASM96255v1	-	CFSAN00327
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.92567	37.9	-	MJCM01	14	2980	2884	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03357088	GCA_001758985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/985/GCA_001758985.1_ASM175898v1	-	CFSAN002298
Mycobacterium tuberculosis TB_RSA02	1421918	PRJNA227996	227996	Terrabacteria group	Actinobacteria	4.41091	65.5	-	JKXK01	9	4288	4103	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403443	GCA_000669875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/875/GCA_000669875.1_Myco_tube_TB_RSA02_V1	-	TB_RSA02
Escherichia coli UMEA 4076-1	1281278	PRJNA186381	186381	Proteobacteria	Gammaproteobacteria	4.95553	50.5	-	AWEM01	11	5038	4731	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885990	GCA_000461855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/855/GCA_000461855.1_Esch_coli_UMEA_4076-1_V1	-	UMEA 4076-1
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.0589	39.7	-	CLRC01	74	2266	2059	3/21/15	3/11/17	Contig	SC	SAMEA1028996	GCA_001136685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/685/GCA_001136685.1_6972_2_20	-	SMRU2564
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.63047	66.3	-	MAUP01	161	6373	6126	10/13/16	3/20/17	Contig	University of Trento	SAMN05272423	GCA_001765435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/435/GCA_001765435.1_ASM176543v1	-	TNCF_4M
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.98913	39	-	LLFE01	237	4206	3629	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145670	GCA_001414915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/915/GCA_001414915.1_ASM141491v1	-	ABBL059
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.44478	57.3	-	MPOD01	127	5475	5225	12/1/16	2/21/17	Contig	"West China Hospital, Sichuan University"	SAMN06019523	GCA_001887995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/887/995/GCA_001887995.1_ASM188799v1	-	WCHKP1845
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.8271	64.2	-	FVSC01	8	4765	4621	3/10/17	3/18/17	Scaffold	SC	SAMEA4008303	GCA_900138595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/595/GCA_900138595.1_20034_1_14	-	aerosol_17
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82754	64.2	-	FVSF01	7	4762	4621	3/10/17	3/18/17	Scaffold	SC	SAMEA4008304	GCA_900138615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/615/GCA_900138615.1_20034_1_15	-	aerosol_18
Klebsiella pneumoniae	573	PRJNA323393	323393	Proteobacteria	Gammaproteobacteria	5.47804	57.3	-	LYPQ01	78	5541	4955	12/13/16	2/21/17	Contig	Yonsei university college of medicine	SAMN05178486	GCA_001901735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/735/GCA_001901735.1_ASM190173v1	-	YMC2011/8/B10311
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.01645	39.1	-	LLFQ01	420	3905	3680	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145682	GCA_001414925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/925/GCA_001414925.1_ASM141492v1	-	ABBL067e
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.63323	66.3	-	MAUT01	107	6344	6148	10/13/16	3/20/17	Contig	University of Trento	SAMN05272427	GCA_001765455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/455/GCA_001765455.1_ASM176545v1	-	TNCF_10M
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07217	39.7	-	CNQS02	159	2238	2040	3/23/15	3/11/17	Contig	SC	SAMEA1032654	GCA_001136705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/705/GCA_001136705.2_6999_1_21	-	R34-3204
Escherichia coli UMEA 4207-1	1281279	PRJNA186382	186382	Proteobacteria	Gammaproteobacteria	5.14591	50.5	-	AWEN01	13	5250	4901	8/28/13	2/23/17	Scaffold	Broad Institute	SAMN01885991	GCA_000461875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/875/GCA_000461875.1_Esch_coli_UMEA_4207-1_V1	-	UMEA 4207-1
Mycobacterium tuberculosis TB_RSA03	1421919	PRJNA227997	227997	Terrabacteria group	Actinobacteria	4.4034	65.6	-	JKXJ01	4	4284	4103	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403444	GCA_000669895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/895/GCA_000669895.1_Myco_tube_TB_RSA03_V1	-	TB_RSA03
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.94234	37.9	-	MJCN01	19	2961	2875	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03357089	GCA_001758995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/995/GCA_001758995.1_ASM175899v1	-	BCW_2415
Salmonella enterica subsp. enterica serovar Heidelberg str. 92-0138	1173848	PRJNA161435	161435	Proteobacteria	Gammaproteobacteria	4.85946	52	-	AMOK01	196	5086	4623	3/24/15	2/27/17	Contig	FDA	SAMN01088043	GCA_000962565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/565/GCA_000962565.1_ASM96256v1	-	92-0138
Staphylococcus aureus M0749	1393718	PRJNA217742	217742	Terrabacteria group	Firmicutes	2.86894	32.8	-	JCWH01	38	3031	2872	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02339957	GCA_000547625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/625/GCA_000547625.1_Stap_aure_M0749_V1	-	M0749
Staphylococcus aureus M0753	1393719	PRJNA217743	217743	Terrabacteria group	Firmicutes	2.82411	32.8	-	JCWI01	32	2965	2809	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02339958	GCA_000547645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/645/GCA_000547645.1_Stap_aure_M0753_V1	-	M0753
Salmonella enterica subsp. enterica serovar Heidelberg str. 82-1617	1173839	PRJNA161417	161417	Proteobacteria	Gammaproteobacteria	4.74253	52.2	-	AMOA01	100	4869	4456	3/24/15	2/27/17	Contig	FDA	SAMN01088033	GCA_000962605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/605/GCA_000962605.1_ASM96260v1	-	82-1617
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.96743	37.9	-	MJCO01	18	3049	2959	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03357090	GCA_001759025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/025/GCA_001759025.1_ASM175902v1	-	BCW_2416
Mycobacterium tuberculosis TB_RSA04	1421920	PRJNA227998	227998	Terrabacteria group	Actinobacteria	4.40548	65.6	-	JKXI01	9	4290	4110	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403445	GCA_000669915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/915/GCA_000669915.1_Myco_tube_TB_RSA04_V1	-	TB_RSA04
Escherichia coli UMEA 3652-1	1281257	PRJNA186360	186360	Proteobacteria	Gammaproteobacteria	5.24573	50.5	-	AWDS01	7	5373	5016	9/3/13	2/23/17	Scaffold	Broad Institute	SAMN01885969	GCA_000463605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/605/GCA_000463605.1_Esch_coli_UMEA_3652-1_V1	-	UMEA 3652-1
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.11909	39.7	-	CMWC01	84	2291	2008	3/23/15	3/11/17	Contig	SC	SAMEA1022958	GCA_001136745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/745/GCA_001136745.1_5756_6_8	-	304
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.62351	66.3	-	MAUR01	259	6411	6086	10/13/16	3/20/17	Contig	University of Trento	SAMN05272425	GCA_001765465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/465/GCA_001765465.1_ASM176546v1	-	TNCF_7M
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.00094	39.1	-	LLFS01	517	3896	3660	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145684	GCA_001414935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/935/GCA_001414935.1_ASM141493v1	-	ABBL067g
Klebsiella pneumoniae	573	PRJNA323393	323393	Proteobacteria	Gammaproteobacteria	5.30776	57.5	-	LYPU01	61	5307	4734	12/13/16	2/21/17	Contig	Yonsei university college of medicine	SAMN05178491	GCA_001901755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/755/GCA_001901755.1_ASM190175v1	-	YMC2011/7/B7207
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82649	64.2	-	FVSJ01	6	4762	4622	3/10/17	3/18/17	Scaffold	SC	SAMEA4008311	GCA_900138625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/625/GCA_900138625.1_20034_1_22	-	aerosol_25
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82636	64.1	-	FVSH01	7	4762	4618	3/10/17	3/18/17	Scaffold	SC	SAMEA4008309	GCA_900138635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/635/GCA_900138635.1_20034_1_20	-	aerosol_Sputum_2
Klebsiella pneumoniae	573	PRJNA323393	323393	Proteobacteria	Gammaproteobacteria	5.63522	57.2	-	LYPT01	104	5776	5266	12/13/16	2/21/17	Contig	Yonsei university college of medicine	SAMN05178490	GCA_001901855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/855/GCA_001901855.1_ASM190185v1	-	YMC2011/11/B7578
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.00354	38.9	-	LLFW01	103	3908	3703	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145688	GCA_001414985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/985/GCA_001414985.1_ASM141498v1	-	ABBL067k
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.6437	66.3	-	MAUS01	101	6369	6166	10/13/16	3/20/17	Contig	University of Trento	SAMN05272426	GCA_001765475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/475/GCA_001765475.1_ASM176547v1	-	TNCF_10
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07594	39.8	-	CRKX01	61	2250	2065	3/22/15	3/11/17	Contig	SC	SAMEA1025141	GCA_001136785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/785/GCA_001136785.1_6753_4_23	-	SMRU1559
Escherichia coli HVH 190 (4-3255514)	1281117	PRJNA186216	186216	Proteobacteria	Gammaproteobacteria	4.84978	50.6	-	AVYQ01	6	4902	4600	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885829	GCA_000465135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/135/GCA_000465135.1_Esch_coli_HVH_190_4-3255514_V1	-	HVH 190 (4-3255514)
Mycobacterium tuberculosis TB_RSA05	1421921	PRJNA227999	227999	Terrabacteria group	Actinobacteria	4.4136	65.5	-	JKXH01	9	4292	4102	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403446	GCA_000669935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/935/GCA_000669935.1_Myco_tube_TB_RSA05_V1	-	TB_RSA05
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.89131	38	-	MJCP01	16	2912	2826	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03357091	GCA_001759035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/035/GCA_001759035.1_ASM175903v1	-	BCW_2417
Salmonella enterica subsp. enterica serovar Heidelberg str. 84-1004	1173841	PRJNA161421	161421	Proteobacteria	Gammaproteobacteria	4.74294	52.2	-	AMOC01	66	4849	4495	3/24/15	2/27/17	Contig	FDA	SAMN01088035	GCA_000962625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/625/GCA_000962625.1_ASM96262v1	-	84-1004
Staphylococcus aureus M0754	1393720	PRJNA217744	217744	Terrabacteria group	Firmicutes	2.88158	32.9	-	JCWJ01	48	3034	2877	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02339959	GCA_000547665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/665/GCA_000547665.1_Stap_aure_M0754_V1	-	M0754
Staphylococcus aureus M0757	1393722	PRJNA217746	217746	Terrabacteria group	Firmicutes	2.84365	32.9	-	JCWK01	35	2979	2822	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02339961	GCA_000547685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/685/GCA_000547685.1_Stap_aure_M0757_V1	-	M0757
Salmonella enterica subsp. enterica serovar Heidelberg str. 85-0486	1173842	PRJNA161423	161423	Proteobacteria	Gammaproteobacteria	4.86335	52.1	-	AMOD01	60	4998	4660	3/24/15	2/27/17	Contig	FDA	SAMN01088036	GCA_000962655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/655/GCA_000962655.1_ASM96265v1	-	85-0486
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.06594	37.9	-	MJCQ01	21	3127	3047	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03357092	GCA_001759065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/065/GCA_001759065.1_ASM175906v1	-	BCW_2418
Mycobacterium tuberculosis TB_RSA06	1421922	PRJNA228000	228000	Terrabacteria group	Actinobacteria	4.39615	65.6	-	JKXG01	9	4284	4103	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403447	GCA_000669955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/955/GCA_000669955.1_Myco_tube_TB_RSA06_V1	-	TB_RSA06
Escherichia coli HVH 102 (4-6906788)	1281038	PRJNA186123	186123	Proteobacteria	Gammaproteobacteria	5.09454	50.5	-	AVVR01	8	5254	4924	8/28/13	2/22/17	Scaffold	Broad Institute	SAMN01885750	GCA_000465155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/155/GCA_000465155.1_Esch_coli_HVH_102_4-6906788_V1	-	HVH 102 (4-6906788)
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11917	39.6	-	CKGV01	61	2349	2100	3/21/15	3/10/17	Contig	SC	SAMEA1024048	GCA_001137005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/005/GCA_001137005.1_6631_1_20	-	33D
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.61792	66.3	-	MAUQ01	356	6489	6004	10/13/16	3/20/17	Contig	University of Trento	SAMN05272424	GCA_001765485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/485/GCA_001765485.1_ASM176548v1	-	TNCF_6
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.0281	39.1	-	LLFT01	482	3944	3705	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145685	GCA_001414995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/414/995/GCA_001414995.1_ASM141499v1	-	ABBL067h
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.79523	56.8	-	MPWN03	119	5904	5633	12/14/16	5/6/17	Contig	JCVI	SAMN05956104	GCA_001902755.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/755/GCA_001902755.3_ASM190275v3	-	1287_2164
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.92209	63.5	-	FVSK01	202	4807	4655	3/10/17	3/18/17	Scaffold	SC	SAMEA4008312	GCA_900138645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/645/GCA_900138645.1_20034_1_23	-	aerosol_26
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82736	64.1	-	FVSI01	8	4768	4621	3/10/17	3/18/17	Scaffold	SC	SAMEA4008310	GCA_900138655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/655/GCA_900138655.1_20034_1_21	-	aerosol_24
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.63368	57.1	-	MPWC03	119	5777	5528	12/14/16	5/6/17	Contig	JCVI	SAMN05956093	GCA_001902765.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/765/GCA_001902765.3_ASM190276v3	-	1187_2059
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.00131	38.9	-	LLFX01	103	3897	3687	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145689	GCA_001415015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/015/GCA_001415015.1_ASM141501v1	-	ABBL067l
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.64159	66.3	-	MAZE01	86	6342	6157	10/13/16	3/20/17	Contig	University of Trento	SAMN05272450	GCA_001765535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/535/GCA_001765535.1_ASM176553v1	-	TNCF_133_1
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07764	39.7	-	CKOG01	66	2293	2079	3/21/15	3/10/17	Contig	SC	SAMEA1024117	GCA_001137085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/085/GCA_001137085.1_6673_8_19	-	SMRU259
Escherichia coli M1	1392847	PRJNA215830	215830	Proteobacteria	Gammaproteobacteria	5.18623	50.2	-	AWPM01	592	5552	5095	9/11/13	2/22/17	Scaffold	"Department of Pediatrics, Washington University School of Medicine"	SAMN02335229	GCA_000466625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/625/GCA_000466625.1_E_coliM1-1.0	24048526	M1
Mycobacterium tuberculosis TB_RSA07	1421923	PRJNA228001	228001	Terrabacteria group	Actinobacteria	4.42559	65.5	-	JKXF01	3	4293	4115	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403448	GCA_000669975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/975/GCA_000669975.1_Myco_tube_TB_RSA07_V1	-	TB_RSA07
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.88758	38	-	MJCR01	16	2901	2810	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03357093	GCA_001759075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/075/GCA_001759075.1_ASM175907v1	-	BCW_2419
Salmonella enterica subsp. enterica serovar Heidelberg str. 90-0318	1173847	PRJNA161433	161433	Proteobacteria	Gammaproteobacteria	4.76575	52	-	AMOI01	293	5004	4473	3/24/15	3/5/17	Contig	FDA	SAMN01088041	GCA_000962675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/675/GCA_000962675.1_ASM96267v1	-	90-0318
Staphylococcus aureus M0758	1393723	PRJNA217747	217747	Terrabacteria group	Firmicutes	2.87524	32.7	-	JCWL01	69	3054	2885	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02339962	GCA_000547705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/705/GCA_000547705.1_Stap_aure_M0758_V1	-	M0758
Staphylococcus aureus M0759	1393724	PRJNA217748	217748	Terrabacteria group	Firmicutes	2.82645	32.8	-	JCWM01	37	2966	2811	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02339963	GCA_000547725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/725/GCA_000547725.1_Stap_aure_M0759_V1	-	M0759
Salmonella enterica subsp. enterica serovar Heidelberg str. 92-0144	1173849	PRJNA161437	161437	Proteobacteria	Gammaproteobacteria	4.74988	52.1	-	AMOJ01	46	4838	4601	3/24/15	2/27/17	Contig	FDA	SAMN01088042	GCA_000962685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/685/GCA_000962685.1_ASM96268v1	-	92-0144
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.94334	37.9	-	MJCS01	16	2976	2902	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03357094	GCA_001759095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/095/GCA_001759095.1_ASM175909v1	-	BCW_2420
Mycobacterium tuberculosis TB_RSA08	1421924	PRJNA228002	228002	Terrabacteria group	Actinobacteria	4.40634	65.6	-	JKXE01	8	4273	4114	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403449	GCA_000669995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/669/995/GCA_000669995.1_Myco_tube_TB_RSA08_V1	-	TB_RSA08
Escherichia coli M2	1392848	PRJNA215830	215830	Proteobacteria	Gammaproteobacteria	5.20584	50.2	-	AWPN01	578	5575	5122	9/11/13	2/22/17	Scaffold	"Department of Pediatrics, Washington University School of Medicine"	SAMN02335234	GCA_000471065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/065/GCA_000471065.1_E_coliM2-1.0	24048526	M2
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12031	39.6	-	CMAV01	72	2355	2121	3/21/15	3/11/17	Contig	SC	SAMEA1029081	GCA_001137145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/145/GCA_001137145.1_7004_6_32	-	SMRU2840
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.63731	66.3	-	MAZF01	82	6350	6050	10/13/16	3/20/17	Contig	University of Trento	SAMN05272449	GCA_001765545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/545/GCA_001765545.1_ASM176554v1	-	TNCF_133
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.13855	38.9	-	LLFY01	229	4037	3805	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145690	GCA_001415025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/025/GCA_001415025.1_ASM141502v1	-	ABBL068
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.60917	57.3	-	MPWE03	105	5690	5432	12/14/16	5/6/17	Contig	JCVI	SAMN05956095	GCA_001902775.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/775/GCA_001902775.3_ASM190277v3	-	1194_2067
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82651	64.2	-	FVSL01	6	4762	4621	3/10/17	3/18/17	Scaffold	SC	SAMEA4008293	GCA_900138665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/665/GCA_900138665.1_20034_1_4	-	aerosol_5
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82854	64.1	-	FVSG01	13	4766	4621	3/10/17	3/18/17	Scaffold	SC	SAMEA4008292	GCA_900138675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/675/GCA_900138675.1_20034_1_3	-	aerosol_4
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.59828	57.2	-	MPWF03	110	5674	5384	12/14/16	5/6/17	Contig	JCVI	SAMN05956096	GCA_001902815.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/815/GCA_001902815.3_ASM190281v3	-	1205_2072
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.03038	39	-	LLGA01	294	3924	3762	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145692	GCA_001415065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/065/GCA_001415065.1_ASM141506v1	-	ABBL070
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.5448	66.4	-	MAZG01	102	6242	6003	10/13/16	3/20/17	Contig	University of Trento	SAMN05272428	GCA_001765575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/575/GCA_001765575.1_ASM176557v1	-	TNCF_12
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0639	39.5	-	CNRS02	136	2220	2020	3/22/15	3/11/17	Contig	SC	SAMEA1032732	GCA_001137185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/185/GCA_001137185.2_6999_2_19	-	R34-3225
Escherichia coli M3	1392849	PRJNA215830	215830	Proteobacteria	Gammaproteobacteria	5.24846	50.2	-	AWPO01	412	5634	5141	9/11/13	2/24/17	Scaffold	"Department of Pediatrics, Washington University School of Medicine"	SAMN02335244	GCA_000471085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/085/GCA_000471085.2_E_coliM3-1.0	24048526	M3
Mycobacterium tuberculosis TB_RSA09	1421925	PRJNA228003	228003	Terrabacteria group	Actinobacteria	4.40301	65.5	-	JKXD01	6	4300	4114	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403450	GCA_000670015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/015/GCA_000670015.1_Myco_tube_TB_RSA09_V1	-	TB_RSA09
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.0198	37.8	-	MJCT01	21	3084	2999	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03357095	GCA_001759115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/115/GCA_001759115.1_ASM175911v1	-	BCW_2421
Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN00323	1182165	PRJNA162787	162787	Proteobacteria	Gammaproteobacteria	4.73734	52.1	-	AMOL01	116	4848	4535	3/24/15	2/27/17	Contig	FDA	SAMN01088045	GCA_000962695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/695/GCA_000962695.1_ASM96269v1	-	CFSAN00323
Staphylococcus aureus M0760	1393725	PRJNA217749	217749	Terrabacteria group	Firmicutes	2.83512	32.7	-	JCWN01	75	2988	2837	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02339964	GCA_000547745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/745/GCA_000547745.1_Stap_aure_M0760_V1	-	M0760
Staphylococcus aureus M0761	1393726	PRJNA217751	217751	Terrabacteria group	Firmicutes	2.78696	32.9	-	JCWO01	44	2872	2699	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02339965	GCA_000547765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/765/GCA_000547765.1_Stap_aure_M0761_V1	-	M0761
Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN00324	1182166	PRJNA162789	162789	Proteobacteria	Gammaproteobacteria	4.86968	52	-	AMOM01	87	5024	4716	3/24/15	2/27/17	Contig	FDA	SAMN01088046	GCA_000962725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/725/GCA_000962725.1_ASM96272v1	-	CFSAN00324
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.88422	38	-	MJCU01	16	2903	2811	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03357096	GCA_001759145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/145/GCA_001759145.1_ASM175914v1	-	BCW_2422
Mycobacterium tuberculosis TB_RSA10	1421926	PRJNA228004	228004	Terrabacteria group	Actinobacteria	4.38943	65.6	-	JKXC01	8	4279	4098	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403451	GCA_000670035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/035/GCA_000670035.1_Myco_tube_TB_RSA10_V1	-	TB_RSA10
Escherichia coli M4	1392850	PRJNA215830	215830	Proteobacteria	Gammaproteobacteria	5.27776	50.2	-	AWPP01	419	5685	5202	9/11/13	2/22/17	Scaffold	"Department of Pediatrics, Washington University School of Medicine"	SAMN02335247	GCA_000471105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/105/GCA_000471105.1_E_coliM4-1.0	24048526	M4
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.08661	39.6	-	CKRF01	51	2263	2054	3/21/15	3/11/17	Contig	SC	SAMEA1023939	GCA_001137225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/225/GCA_001137225.1_6680_8_13	-	SMRU205
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.63261	66.3	-	MAZH01	88	6347	6111	10/13/16	3/20/17	Contig	University of Trento	SAMN05272430	GCA_001765585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/585/GCA_001765585.1_ASM176558v1	-	TNCF_14
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.09576	38.9	-	LLGB01	124	3957	3800	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145693	GCA_001415085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/085/GCA_001415085.1_ASM141508v1	-	ABBL071
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.54824	57.2	-	MPWB03	81	5596	5385	12/14/16	5/6/17	Contig	JCVI	SAMN05956124	GCA_001902835.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/835/GCA_001902835.3_ASM190283v3	-	1521_2451
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.8266	64.2	-	FWCS01	7	4765	4620	3/16/17	3/24/17	Scaffold	SC	SAMEA4008294	GCA_900138685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/685/GCA_900138685.1_20034_1_5	-	aerosol_6
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82615	64.2	-	FVSS01	6	4761	4620	3/10/17	3/18/17	Scaffold	SC	SAMEA4008295	GCA_900138695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/695/GCA_900138695.1_20034_1_6	-	aerosol_7
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.54127	57.2	-	MPXN03	118	5678	5437	12/14/16	5/6/17	Contig	JCVI	SAMN05956070	GCA_001902855.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/855/GCA_001902855.3_ASM190285v3	-	700_1644
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.09368	39	-	LLGD01	137	4028	3841	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145695	GCA_001415095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/095/GCA_001415095.1_ASM141509v1	-	ABBL073
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.6355	66.3	-	MAZJ01	71	6343	6171	10/13/16	3/20/17	Contig	University of Trento	SAMN05272432	GCA_001765595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/595/GCA_001765595.1_ASM176559v1	-	TNCF_23
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08056	39.5	-	CNYX02	180	2229	2037	3/23/15	3/5/17	Contig	SC	SAMEA1463148	GCA_001137265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/265/GCA_001137265.2_7553_4_7	-	ND6119
Escherichia coli M5	1392851	PRJNA215830	215830	Proteobacteria	Gammaproteobacteria	5.06123	50.3	-	AWPQ01	389	5427	4945	9/11/13	4/6/17	Scaffold	"Department of Pediatrics, Washington University School of Medicine"	SAMN02335245	GCA_000471125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/125/GCA_000471125.1_E_coliM5-1.0	24048526	M5
Mycobacterium tuberculosis TB_RSA11	1421927	PRJNA228005	228005	Terrabacteria group	Actinobacteria	4.39667	65.6	-	JKXB01	6	4292	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403452	GCA_000670055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/055/GCA_000670055.1_Myco_tube_TB_RSA11_V1	-	TB_RSA11
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.93505	37.9	-	MJCV01	9	2983	2895	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03357097	GCA_001759155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/155/GCA_001759155.1_ASM175915v1	-	BCW_2423
Salmonella enterica subsp. enterica serovar Berta	28142	PRJNA273259	273259	Proteobacteria	Gammaproteobacteria	4.71863	52.3	-	JZUV01	44	4808	4546	3/27/15	2/27/17	Contig	Canadian Food Inspection Agency	SAMN03383465	GCA_000964145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/145/GCA_000964145.1_ASM96414v1	27103707	OLC-759
Staphylococcus aureus M0762	1393727	PRJNA217753	217753	Terrabacteria group	Firmicutes	2.88492	32.9	-	JCWP01	40	3048	2877	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02339966	GCA_000547785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/785/GCA_000547785.1_Stap_aure_M0762_V1	-	M0762
Staphylococcus aureus M0763	1393728	PRJNA217754	217754	Terrabacteria group	Firmicutes	2.91529	32.8	-	JCWQ01	63	3082	2907	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02339967	GCA_000547805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/805/GCA_000547805.1_Stap_aure_M0763_V1	-	M0763
Salmonella enterica subsp. enterica serovar Berta str. ATCC 8392	1124926	PRJNA273259	273259	Proteobacteria	Gammaproteobacteria	4.71849	52.3	-	JZUW01	67	4807	4538	3/27/15	2/27/17	Contig	Canadian Food Inspection Agency	SAMN03383466	GCA_000964155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/155/GCA_000964155.1_ASM96415v1	-	ATCC 8392
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.99426	37.9	-	MJCW01	16	3049	2973	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03357098	GCA_001759185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/185/GCA_001759185.1_ASM175918v1	-	CFSAN002308
Mycobacterium tuberculosis TB_RSA12	1421928	PRJNA228006	228006	Terrabacteria group	Actinobacteria	4.39412	65.6	-	JKXA01	17	4285	4102	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403453	GCA_000670075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/075/GCA_000670075.1_Myco_tube_TB_RSA12_V1	-	TB_RSA12
Escherichia coli M6	1392852	PRJNA215830	215830	Proteobacteria	Gammaproteobacteria	5.2703	50.2	-	AWPR01	395	5669	5186	9/11/13	2/22/17	Scaffold	"Department of Pediatrics, Washington University School of Medicine"	SAMN02335248	GCA_000471145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/145/GCA_000471145.1_E_coliM6-1.0	24048526	M6
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09818	39.6	-	COFA02	163	2239	2029	3/23/15	3/5/17	Contig	SC	SAMEA1463157	GCA_001137345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/345/GCA_001137345.2_7622_5_67	-	ND6000
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.62744	66.3	-	MAZL01	138	6356	6137	10/13/16	3/20/17	Contig	University of Trento	SAMN05272435	GCA_001765635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/635/GCA_001765635.1_ASM176563v1	-	TNCF_32M
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.88583	39	-	LLGG01	439	3816	3591	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145698	GCA_001415165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/165/GCA_001415165.1_ASM141516v1	-	ABBL076
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.58318	57.2	-	MPXC03	116	5623	5358	12/14/16	5/6/17	Contig	JCVI	SAMN05956119	GCA_001902865.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/865/GCA_001902865.3_ASM190286v3	-	1477_2395
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82611	64.2	-	FVSV01	8	4764	4618	3/10/17	3/18/17	Scaffold	SC	SAMEA4008297	GCA_900138705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/705/GCA_900138705.1_20034_1_8	-	aerosol_10
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82658	64.2	-	FVSW01	6	4761	4616	3/10/17	3/18/17	Scaffold	SC	SAMEA4008298	GCA_900138715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/715/GCA_900138715.1_20034_1_9	-	aerosol_11
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.44072	57.4	-	MPWA03	98	5521	5314	12/14/16	5/6/17	Contig	JCVI	SAMN05956123	GCA_001902875.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/875/GCA_001902875.3_ASM190287v3	-	1512_2440
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.86283	39	-	LLGL01	328	3782	3542	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145703	GCA_001415215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/215/GCA_001415215.1_ASM141521v1	-	ABBL082
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.6394	66.3	-	MAZM01	70	6348	6169	10/13/16	3/20/17	Contig	University of Trento	SAMN05272436	GCA_001765645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/645/GCA_001765645.1_ASM176564v1	-	TNCF_42
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.03117	39.7	-	CNWT02	111	2195	1996	3/23/15	3/11/17	Contig	SC	SAMEA1032533	GCA_001137425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/425/GCA_001137425.2_7001_2_14	-	R34-3119
Escherichia coli M7	1392853	PRJNA215830	215830	Proteobacteria	Gammaproteobacteria	5.27552	50.2	-	AWPS01	414	5680	5208	9/11/13	2/22/17	Scaffold	"Department of Pediatrics, Washington University School of Medicine"	SAMN02335246	GCA_000471165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/165/GCA_000471165.1_E_coliM7-1.0	24048526	M7
Mycobacterium tuberculosis TB_RSA13	1421929	PRJNA228007	228007	Terrabacteria group	Actinobacteria	4.40895	65.5	-	JKWZ01	8	4300	4111	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403454	GCA_000670095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/095/GCA_000670095.1_Myco_tube_TB_RSA13_V1	-	TB_RSA13
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.94687	37.9	-	MJCX01	27	2968	2893	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03357099	GCA_001759195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/195/GCA_001759195.1_ASM175919v1	-	CFSAN002309
Salmonella enterica subsp. enterica serovar Mishmarhaemek	1629955	PRJNA273259	273259	Proteobacteria	Gammaproteobacteria	4.83278	52.2	-	JZUU01	43	4909	4664	3/27/15	2/27/17	Contig	Canadian Food Inspection Agency	SAMN03383462	GCA_000964185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/964/185/GCA_000964185.1_ASM96418v1	26472847	OLC-1602
Staphylococcus aureus M0764	1393729	PRJNA217755	217755	Terrabacteria group	Firmicutes	2.86263	32.8	-	JCWR01	58	3018	2845	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02339968	GCA_000547825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/825/GCA_000547825.1_Stap_aure_M0764_V1	-	M0764
Staphylococcus aureus M0766	1393731	PRJNA217757	217757	Terrabacteria group	Firmicutes	2.87912	32.7	-	JCWS01	71	3092	2922	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02339970	GCA_000547845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/845/GCA_000547845.1_Stap_aure_M0766_V1	-	M0766
Salmonella enterica subsp. salamae	59202	PRJNA273912	273912	Proteobacteria	Gammaproteobacteria	4.79013	51.9	-	JXTT01	74	4799	4457	4/3/15	2/27/17	Contig	Harbin Medical University	SAMN03287946	GCA_000968635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/635/GCA_000968635.1_ASM96863v1	-	RKS2993
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.93665	37.9	-	MJCY01	17	2944	2877	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03357154	GCA_001759225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/225/GCA_001759225.1_ASM175922v1	-	BCW_2624
Mycobacterium tuberculosis TB_RSA14	1421930	PRJNA228008	228008	Terrabacteria group	Actinobacteria	4.41685	65.5	-	JKWY01	10	4292	4111	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403455	GCA_000670115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/115/GCA_000670115.1_Myco_tube_TB_RSA14_V1	-	TB_RSA14
Escherichia coli M8	1392854	PRJNA215830	215830	Proteobacteria	Gammaproteobacteria	5.16396	50.1	-	AWPT01	883	5772	5100	9/11/13	2/22/17	Scaffold	"Department of Pediatrics, Washington University School of Medicine"	SAMN02335255	GCA_000471185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/185/GCA_000471185.1_E_coliM8-1.0	24048526	M8
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.08425	39.7	-	CKOD01	65	2303	2087	3/21/15	3/4/17	Contig	SC	SAMEA1024124	GCA_001137445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/445/GCA_001137445.1_6673_8_20	-	SMRU260
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.63631	66.3	-	MAZK01	63	6340	6170	10/13/16	3/20/17	Contig	University of Trento	SAMN05272433	GCA_001765655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/655/GCA_001765655.1_ASM176565v1	-	TNCF_23M
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.03469	39.1	-	LLGP01	370	4005	3802	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145707	GCA_001415255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/255/GCA_001415255.1_ASM141525v1	-	ABBL088
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.55587	57.2	-	MPXG03	130	5717	5462	12/14/16	5/6/17	Contig	JCVI	SAMN05956063	GCA_001902905.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/905/GCA_001902905.3_ASM190290v3	-	440_1360
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.82709	64.2	-	FVSP01	8	4769	4622	3/10/17	3/18/17	Scaffold	SC	SAMEA4008296	GCA_900138725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/725/GCA_900138725.1_20034_1_7	-	aerosol_9
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.32002	64.2	-	FSLX01	72	5324	5165	12/14/16	3/21/17	Scaffold	SC	SAMEA2069150	GCA_900138825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/825/GCA_900138825.1_10208_3_52	-	477
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.66551	57.2	-	MPWY03	54	5722	5479	12/14/16	5/6/17	Contig	JCVI	SAMN05956115	GCA_001902935.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/935/GCA_001902935.3_ASM190293v3	-	1429_2334
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.1387	39.1	-	LLGS01	509	4113	3904	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145710	GCA_001415275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/275/GCA_001415275.1_ASM141527v1	-	ABBL091
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.63955	66.3	-	MAZN01	70	6345	6165	10/13/16	3/20/17	Contig	University of Trento	SAMN05272437	GCA_001765695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/695/GCA_001765695.1_ASM176569v1	-	TNCF_42M
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.01338	39.6	-	CRJB01	54	2210	2001	3/22/15	3/4/17	Contig	SC	SAMEA1025206	GCA_001137465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/465/GCA_001137465.1_6753_1_7	-	SMRU1471
Escherichia coli M9	1392855	PRJNA215830	215830	Proteobacteria	Gammaproteobacteria	5.30542	50.2	-	AWPU01	586	5698	5258	9/11/13	2/22/17	Scaffold	"Department of Pediatrics, Washington University School of Medicine"	SAMN02335239	GCA_000471205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/205/GCA_000471205.1_E_coliM9-1.0	24048526	M9
Mycobacterium tuberculosis TB_RSA15	1421931	PRJNA228009	228009	Terrabacteria group	Actinobacteria	4.40883	65.5	-	JKWX01	10	4283	4105	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403456	GCA_000670135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/135/GCA_000670135.1_Myco_tube_TB_RSA15_V1	-	TB_RSA15
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.98758	37.9	-	MJCZ01	19	3048	2972	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03358723	GCA_001759235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/235/GCA_001759235.1_ASM175923v1	-	BCW_2984
Salmonella enterica subsp. enterica serovar Napoli	1151001	PRJNA287200	287200	Proteobacteria	Gammaproteobacteria	4.5678	52.2	-	LFIH01	210	4698	4311	7/7/15	2/27/17	Contig	Universita degli Studi di Milano	SAMN03777296	GCA_001047615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/615/GCA_001047615.1_ASM104761v1	26358605	SN310
Staphylococcus aureus M0767	1393732	PRJNA217758	217758	Terrabacteria group	Firmicutes	2.8073	32.8	-	JCWT01	34	2933	2764	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02339971	GCA_000547865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/865/GCA_000547865.1_Stap_aure_M0767_V1	-	M0767
Staphylococcus aureus M0768	1393733	PRJNA217759	217759	Terrabacteria group	Firmicutes	2.86177	32.7	-	JCWU01	54	3023	2881	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02339972	GCA_000547885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/885/GCA_000547885.1_Stap_aure_M0768_V1	-	M0768
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB7681	266599	Proteobacteria	Gammaproteobacteria	4.89751	52	-	CDLH01	71	5116	4720	12/9/14	2/27/17	Contig	HPA	SAMEA3110714	GCA_001051385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/385/GCA_001051385.1_ASM105138v1	-	H58
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.98917	37.9	-	MJDA01	18	3062	2972	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03358724	GCA_001759265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/265/GCA_001759265.1_ASM175926v1	-	BCW_2985
Mycobacterium tuberculosis TB_RSA16	1421932	PRJNA228010	228010	Terrabacteria group	Actinobacteria	4.40712	65.5	-	JKWW01	10	4291	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403457	GCA_000670155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/155/GCA_000670155.1_Myco_tube_TB_RSA16_V1	-	TB_RSA16
Escherichia coli M10	1392856	PRJNA215830	215830	Proteobacteria	Gammaproteobacteria	5.22986	50.2	-	AWPV01	596	5579	5157	9/11/13	2/22/17	Scaffold	"Department of Pediatrics, Washington University School of Medicine"	SAMN02335238	GCA_000471225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/225/GCA_000471225.1_E_coliM10-1.0	24048526	M10
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.1503	39.7	-	CIMK01	63	2315	2029	3/21/15	3/6/17	Contig	SC	SAMEA1024651	GCA_001137525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/525/GCA_001137525.1_6680_5_1	-	SMRU913
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.63546	66.3	-	MAZO01	76	6346	6162	10/13/16	3/20/17	Contig	University of Trento	SAMN05272438	GCA_001765715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/715/GCA_001765715.1_ASM176571v1	-	TNCF_49M
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.00253	39.1	-	LLFU01	478	3902	3688	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145686	GCA_001415295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/295/GCA_001415295.1_ASM141529v1	-	ABBL067i
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.68029	56.9	-	MPXB03	115	5786	5553	12/14/16	5/6/17	Contig	JCVI	SAMN05956118	GCA_001902945.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/945/GCA_001902945.3_ASM190294v3	-	1473_2389
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.20647	64.2	-	FSLY01	37	5210	5063	12/14/16	3/21/17	Scaffold	SC	SAMEA2069151	GCA_900138885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/885/GCA_900138885.1_10208_3_55	-	480
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.87407	61.1	-	FVTJ01	1056	5642	5447	3/10/17	3/18/17	Scaffold	SC	SAMEA2071620	GCA_900138975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/138/975/GCA_900138975.1_10208_3_65	-	490
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.60194	57.3	-	MPXA03	108	5678	5419	12/14/16	5/6/17	Contig	JCVI	SAMN05956117	GCA_001902955.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/955/GCA_001902955.3_ASM190295v3	-	1437_2342
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.09027	38.8	-	LLFV01	141	3995	3775	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145687	GCA_001415325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/325/GCA_001415325.1_ASM141532v1	-	ABBL067j
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.63375	66.3	-	MAZP01	82	6353	6093	10/13/16	3/20/17	Contig	University of Trento	SAMN05272439	GCA_001765725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/725/GCA_001765725.1_ASM176572v1	-	TNCF_68
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.29018	39.9	-	CLEJ01	74	2465	2233	3/21/15	3/4/17	Contig	SC	SAMEA1025816	GCA_001137625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/625/GCA_001137625.1_6899_6_24	-	SMRU2088
Escherichia coli M11	1392857	PRJNA215830	215830	Proteobacteria	Gammaproteobacteria	5.2694	50.2	-	AWPW01	392	5659	5186	9/11/13	2/22/17	Scaffold	"Department of Pediatrics, Washington University School of Medicine"	SAMN02335243	GCA_000471245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/245/GCA_000471245.1_E_coliM11-1.0	24048526	M11
Mycobacterium tuberculosis TB_RSA17	1421933	PRJNA228011	228011	Terrabacteria group	Actinobacteria	4.4143	65.5	-	JKWV01	11	4297	4117	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403458	GCA_000670175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/175/GCA_000670175.1_Myco_tube_TB_RSA17_V1	-	TB_RSA17
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.94685	37.9	-	MJDB01	14	2997	2905	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03358725	GCA_001759275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/275/GCA_001759275.1_ASM175927v1	-	BCW_2986
Salmonella enterica subsp. enterica serovar Newport str. 36807	984249	PRJNA62863	62863	Proteobacteria	Gammaproteobacteria	4.79809	52.2	-	APGR01	186	4960	4609	7/9/15	2/27/17	Contig	FDA	SAMN01816133	GCA_001051525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/525/GCA_001051525.1_ASM105152v1	-	36807
Staphylococcus aureus M0771	1393734	PRJNA217760	217760	Terrabacteria group	Firmicutes	2.88432	32.7	-	JCWV01	69	3075	2891	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02339973	GCA_000547905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/905/GCA_000547905.1_Stap_aure_M0771_V1	-	M0771
Staphylococcus aureus M1366	1397996	PRJNA218371	218371	Terrabacteria group	Firmicutes	2.87039	32.9	-	JCWW01	57	3054	2846	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350551	GCA_000547925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/925/GCA_000547925.1_Stap_aure_M1366_V1	-	M1366
Salmonella enterica subsp. enterica serovar Newport str. 36805	984248	PRJNA62861	62861	Proteobacteria	Gammaproteobacteria	4.80108	52.2	-	APGS01	137	4943	4611	7/9/15	2/27/17	Contig	FDA	SAMN01816132	GCA_001051535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/535/GCA_001051535.1_ASM105153v1	-	36805
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.03011	37.9	-	MJDC01	19	3065	2985	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03358726	GCA_001759305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/305/GCA_001759305.1_ASM175930v1	-	CFSAN002313
Mycobacterium tuberculosis TB_RSA18	1421934	PRJNA228012	228012	Terrabacteria group	Actinobacteria	4.40067	65.5	-	JKWU01	8	4286	4102	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403459	GCA_000670195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/195/GCA_000670195.1_Myco_tube_TB_RSA18_V1	-	TB_RSA18
Escherichia coli M12	1392858	PRJNA215830	215830	Proteobacteria	Gammaproteobacteria	5.24673	50.2	-	AWPX01	591	5606	5180	9/11/13	2/22/17	Scaffold	"Department of Pediatrics, Washington University School of Medicine"	SAMN02335233	GCA_000471265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/265/GCA_000471265.1_E_coliM12-1.0	24048526	M12
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10126	39.7	-	CLNK01	80	2329	2125	3/21/15	3/4/17	Contig	SC	SAMEA1028696	GCA_001137645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/645/GCA_001137645.1_6938_8_20	-	19F
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.63959	66.3	-	MAZQ01	88	6366	6070	10/13/16	3/20/17	Contig	University of Trento	SAMN05272440	GCA_001765755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/755/GCA_001765755.1_ASM176575v1	-	TNCF_69
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.10187	38.9	-	LLFZ01	355	4040	3779	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145691	GCA_001415345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/345/GCA_001415345.1_ASM141534v1	-	ABBL069
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.55511	57.3	-	MPWH03	134	5696	5463	12/14/16	5/6/17	Contig	JCVI	SAMN05956098	GCA_001902965.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/965/GCA_001902965.3_ASM190296v3	-	1225_2091
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.07248	64.1	-	FSME01	14	5075	4978	12/14/16	3/21/17	Scaffold	SC	SAMEA2162277	GCA_900139025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/025/GCA_900139025.1_10465_1_49	-	582
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.11128	64.2	-	FVTL01	14	5130	5018	3/10/17	3/18/17	Scaffold	SC	SAMEA2156659	GCA_900139035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/035/GCA_900139035.1_10465_1_50	-	588
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.83757	56.8	-	MPWK03	111	5975	5735	12/14/16	5/6/17	Contig	JCVI	SAMN05956101	GCA_001903015.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/015/GCA_001903015.3_ASM190301v3	-	1260_2136
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.32814	39	-	LLGC01	210	4274	4052	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145694	GCA_001415355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/355/GCA_001415355.1_ASM141535v1	-	ABBL072
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.63725	66.3	-	MAZI01	75	6349	6162	10/13/16	3/20/17	Contig	University of Trento	SAMN05272429	GCA_001765775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/775/GCA_001765775.1_ASM176577v1	-	TNCF_13
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04912	39.6	-	CNNU02	159	2207	2004	3/23/15	3/11/17	Contig	SC	SAMEA1032540	GCA_001137805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/805/GCA_001137805.2_6925_1_67	-	R34-3049
Escherichia coli M13	1392859	PRJNA215830	215830	Proteobacteria	Gammaproteobacteria	5.18499	50.2	-	AWPY01	571	5564	5110	9/11/13	2/22/17	Scaffold	"Department of Pediatrics, Washington University School of Medicine"	SAMN02335228	GCA_000471285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/285/GCA_000471285.1_E_coliM13-1.0	24048526	M13
Mycobacterium tuberculosis TB_RSA19	1421935	PRJNA228013	228013	Terrabacteria group	Actinobacteria	4.416	65.5	-	JKWT01	6	4285	4104	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403460	GCA_000670215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/215/GCA_000670215.1_Myco_tube_TB_RSA19_V1	-	TB_RSA19
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.9417	37.9	-	MJDD01	15	2976	2902	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03358727	GCA_001759315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/315/GCA_001759315.1_ASM175931v1	-	CFSAN002314
Salmonella enterica subsp. enterica serovar Newport str. 36804	984247	PRJNA62859	62859	Proteobacteria	Gammaproteobacteria	4.80153	52.1	-	APGQ01	194	5014	4577	7/9/15	2/27/17	Contig	FDA	SAMN01816131	GCA_001051545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/545/GCA_001051545.1_ASM105154v1	-	36804
Staphylococcus aureus M1369	1397998	PRJNA218373	218373	Terrabacteria group	Firmicutes	2.86486	32.8	-	JCWX01	40	3006	2838	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350553	GCA_000547945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/945/GCA_000547945.1_Stap_aure_M1369_V1	-	M1369
Staphylococcus aureus M1370	1397999	PRJNA218374	218374	Terrabacteria group	Firmicutes	2.89731	32.9	-	JCWY01	21	3040	2867	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350554	GCA_000547965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/965/GCA_000547965.1_Stap_aure_M1370_V1	-	M1370
Salmonella enterica subsp. enterica serovar Newport str. 36801	984244	PRJNA62853	62853	Proteobacteria	Gammaproteobacteria	4.80851	52.1	-	APGT01	54	4929	4673	7/9/15	2/27/17	Contig	FDA	SAMN01816128	GCA_001051555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/555/GCA_001051555.1_ASM105155v1	-	36801
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.94381	37.9	-	MJDE01	24	2996	2903	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03358728	GCA_001759345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/345/GCA_001759345.1_ASM175934v1	-	CFSAN002315
Mycobacterium tuberculosis TB_RSA20	1421936	PRJNA228014	228014	Terrabacteria group	Actinobacteria	4.41317	65.5	-	JKWS01	5	4290	4101	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403461	GCA_000670235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/235/GCA_000670235.1_Myco_tube_TB_RSA20_V1	-	TB_RSA20
Escherichia coli M14	1392860	PRJNA215830	215830	Proteobacteria	Gammaproteobacteria	5.2514	50.2	-	AWPZ01	593	5606	5190	9/11/13	2/22/17	Scaffold	"Department of Pediatrics, Washington University School of Medicine"	SAMN02335241	GCA_000471305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/305/GCA_000471305.1_E_coliM14-1.0	24048526	M14
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00361	39.7	-	CNZV02	240	2122	1958	3/23/15	3/5/17	Contig	SC	SAMEA1463081	GCA_001137825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/825/GCA_001137825.2_7553_5_85	-	PT8069
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.64428	66.3	-	MAZS01	101	6363	6156	10/13/16	3/20/17	Contig	University of Trento	SAMN05272442	GCA_001765795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/795/GCA_001765795.1_ASM176579v1	-	TNCF_85
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.27907	39	-	LLGJ01	384	4277	4019	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145701	GCA_001415385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/385/GCA_001415385.1_ASM141538v1	-	ABBL079
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.34792	57.4	-	MPWJ03	89	5437	5229	12/14/16	5/6/17	Contig	JCVI	SAMN05956100	GCA_001903025.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/025/GCA_001903025.3_ASM190302v3	-	1254_2128
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.05019	64.1	-	FVTP01	14	5079	4924	3/10/17	3/18/17	Scaffold	SC	SAMEA2143481	GCA_900139055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/055/GCA_900139055.1_10465_1_52	-	599
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.19553	64.1	-	FVTQ01	37	5260	5102	3/10/17	3/18/17	Scaffold	SC	SAMEA2144260	GCA_900139065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/065/GCA_900139065.1_10465_1_51	-	593
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.61098	57.3	-	MPWL03	111	5714	5444	12/14/16	5/6/17	Contig	JCVI	SAMN05956102	GCA_001903035.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/035/GCA_001903035.3_ASM190303v3	-	1280_2158
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.95552	39.1	-	LLGM01	344	3847	3643	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145704	GCA_001415425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/425/GCA_001415425.1_ASM141542v1	-	ABBL083
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.63462	66.3	-	MAZR01	61	6338	6127	10/13/16	3/20/17	Contig	University of Trento	SAMN05272441	GCA_001765805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/805/GCA_001765805.1_ASM176580v1	-	TNCF_76
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.1529	39.6	-	CKGZ01	61	2340	2122	3/21/15	3/4/17	Contig	SC	SAMEA1023944	GCA_001137865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/865/GCA_001137865.1_6631_1_4	-	6B
Escherichia coli M15	1007065	PRJNA215830	215830	Proteobacteria	Gammaproteobacteria	5.25338	50.2	-	AWQA01	571	5600	5170	9/11/13	2/22/17	Scaffold	"Department of Pediatrics, Washington University School of Medicine"	SAMN02335236	GCA_000471325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/325/GCA_000471325.1_E_coliM15-1.0	24048526	M15
Mycobacterium tuberculosis TB_RSA21	1421937	PRJNA228015	228015	Terrabacteria group	Actinobacteria	4.40499	65.5	-	JKWR01	9	4287	4102	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403462	GCA_000670255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/255/GCA_000670255.1_Myco_tube_TB_RSA21_V1	-	TB_RSA21
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.94853	37.9	-	MJDF01	15	2992	2904	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03358729	GCA_001759355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/355/GCA_001759355.1_ASM175935v1	-	CFSAN002316
Salmonella enterica subsp. enterica serovar Newport str. 36802	984245	PRJNA62855	62855	Proteobacteria	Gammaproteobacteria	4.81067	52.2	-	APGV01	58	4926	4668	7/9/15	2/27/17	Contig	FDA	SAMN01816129	GCA_001051605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/605/GCA_001051605.1_ASM105160v1	-	36802
Staphylococcus aureus M1371	1398000	PRJNA218375	218375	Terrabacteria group	Firmicutes	2.83986	32.8	-	JCWZ01	50	2969	2821	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350555	GCA_000547985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/547/985/GCA_000547985.1_Stap_aure_M1371_V1	-	M1371
Staphylococcus aureus M1372	1398001	PRJNA218376	218376	Terrabacteria group	Firmicutes	2.90343	32.9	-	JCXA01	49	3064	2892	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350556	GCA_000548005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/005/GCA_000548005.1_Stap_aure_M1372_V1	-	M1372
Salmonella enterica subsp. enterica serovar Newport str. 36799	984243	PRJNA62851	62851	Proteobacteria	Gammaproteobacteria	4.81489	52.2	-	APGU01	59	4933	4683	7/9/15	2/27/17	Contig	FDA	SAMN01816127	GCA_001051615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/615/GCA_001051615.1_ASM105161v1	-	36799
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.00741	37.9	-	MJDG01	27	3067	2966	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03358730	GCA_001759385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/385/GCA_001759385.1_ASM175938v1	-	BCW_2991
Mycobacterium tuberculosis TB_RSA22	1421938	PRJNA228016	228016	Terrabacteria group	Actinobacteria	4.40432	65.5	-	JKWQ01	7	4285	4107	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403463	GCA_000670275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/275/GCA_000670275.1_Myco_tube_TB_RSA22_V1	-	TB_RSA22
Escherichia coli M16	1392861	PRJNA215830	215830	Proteobacteria	Gammaproteobacteria	5.24814	50.2	-	AWQB01	577	5621	5186	9/11/13	2/22/17	Scaffold	"Department of Pediatrics, Washington University School of Medicine"	SAMN02335237	GCA_000471345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/345/GCA_000471345.1_E_coliM16-1.0	24048526	M16
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.14413	39.6	-	CLFZ01	78	2388	2148	3/21/15	3/10/17	Contig	SC	SAMEA1025719	GCA_001137945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/945/GCA_001137945.1_6925_3_24	-	SMRU2136
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.65375	66.3	-	MAZU01	142	6388	6146	10/13/16	3/20/17	Contig	University of Trento	SAMN05272444	GCA_001765835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/835/GCA_001765835.1_ASM176583v1	-	TNCF_101
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.82062	39.1	-	LLGN01	261	3716	3559	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145705	GCA_001415435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/435/GCA_001415435.1_ASM141543v1	-	ABBL085
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	6.2195	56.6	-	MPWS03	278	6487	6109	12/14/16	5/6/17	Contig	JCVI	SAMN05956109	GCA_001903045.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/045/GCA_001903045.3_ASM190304v3	-	1338_2221
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18677	64.2	-	FSMP01	13	5209	5105	12/14/16	3/21/17	Scaffold	SC	SAMEA2160979	GCA_900139175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/175/GCA_900139175.1_10465_1_66	-	676
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.39413	64.1	-	FSMQ01	53	5495	5330	12/14/16	3/21/17	Scaffold	SC	SAMEA2154060	GCA_900139215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/215/GCA_900139215.1_10465_1_68	-	692
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.77546	57	-	MPWP03	133	5920	5656	12/14/16	5/6/17	Contig	JCVI	SAMN05956106	GCA_001903095.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/095/GCA_001903095.3_ASM190309v3	-	1295_2175
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.01055	39.1	-	LLGQ01	365	3986	3793	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145708	GCA_001415465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/465/GCA_001415465.1_ASM141546v1	-	ABBL089
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.63673	66.3	-	MAZT01	65	6344	6164	10/13/16	3/20/17	Contig	University of Trento	SAMN05272443	GCA_001765845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/845/GCA_001765845.1_ASM176584v1	-	TNCF_88M
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.03393	39.7	-	CNTT02	182	2179	1991	3/22/15	3/5/17	Contig	SC	SAMEA1032491	GCA_001138005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/005/GCA_001138005.2_6999_5_12	-	174702
Escherichia coli M17	1392862	PRJNA215830	215830	Proteobacteria	Gammaproteobacteria	5.28522	50.1	-	AWQC01	445	5668	5189	9/11/13	2/22/17	Scaffold	"Department of Pediatrics, Washington University School of Medicine"	SAMN02335253	GCA_000471365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/365/GCA_000471365.1_E_coliM17-1.0	24048526	M17
Mycobacterium tuberculosis TB_RSA23	1421939	PRJNA228017	228017	Terrabacteria group	Actinobacteria	4.40313	65.5	-	JKWP01	21	4292	4103	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403464	GCA_000670295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/295/GCA_000670295.1_Myco_tube_TB_RSA23_V1	-	TB_RSA23
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.00517	37.9	-	MJDH01	31	3049	2967	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03358731	GCA_001759395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/395/GCA_001759395.1_ASM175939v1	-	BCW_2995
Salmonella enterica subsp. enterica serovar Newport str. VA_R100804798	935706	PRJNA61155	61155	Proteobacteria	Gammaproteobacteria	4.81451	52.1	-	APGW01	58	4938	4698	7/9/15	2/27/17	Contig	FDA	SAMN01813904	GCA_001051625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/625/GCA_001051625.1_CFSAN000859_1.0	-	VA_R100804798
Staphylococcus aureus M1377	1398002	PRJNA218377	218377	Terrabacteria group	Firmicutes	2.90691	32.9	-	JCXB01	84	3115	2900	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350557	GCA_000548025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/025/GCA_000548025.1_Stap_aure_M1377_V1	-	M1377
Staphylococcus aureus M1378	1398003	PRJNA218378	218378	Terrabacteria group	Firmicutes	2.86229	32.8	-	JCXC01	31	3011	2856	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350558	GCA_000548045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/045/GCA_000548045.1_Stap_aure_M1378_V1	-	M1378
Salmonella enterica subsp. enterica serovar Newport str. VA_R100808502	935707	PRJNA61157	61157	Proteobacteria	Gammaproteobacteria	4.77425	52.1	-	APGX01	67	4880	4636	7/9/15	2/27/17	Contig	FDA	SAMN01813905	GCA_001051635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/635/GCA_001051635.1_CFSAN000860_1.0	-	VA_R100808502
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.96588	37.9	-	MKMD01	19	3003	2928	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277620	GCA_001759415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/415/GCA_001759415.1_BCW_3813	-	NRRL B-33047
Mycobacterium tuberculosis TB_RSA24	1421940	PRJNA228018	228018	Terrabacteria group	Actinobacteria	4.41671	65.5	-	JKWO01	13	4295	4110	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403465	GCA_000670315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/315/GCA_000670315.1_Myco_tube_TB_RSA24_V1	-	TB_RSA24
Escherichia coli M18	1392863	PRJNA215830	215830	Proteobacteria	Gammaproteobacteria	5.26616	50.2	-	AWQD01	426	5647	5170	9/11/13	2/22/17	Scaffold	"Department of Pediatrics, Washington University School of Medicine"	SAMN02335249	GCA_000471385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/385/GCA_000471385.1_E_coliM18-1.0	24048526	M18
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05394	39.6	-	CNPR02	272	2176	1984	3/23/15	3/11/17	Contig	SC	SAMEA1032657	GCA_001138045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/045/GCA_001138045.2_6952_4_16	-	473937
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.64448	66.3	-	MAZV01	92	6368	6073	10/13/16	3/20/17	Contig	University of Trento	SAMN05272445	GCA_001765855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/855/GCA_001765855.1_ASM176585v1	-	TNCF_105
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.90923	39	-	LLGT01	481	3805	3624	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145711	GCA_001415505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/505/GCA_001415505.1_ASM141550v1	-	ABBL092
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.93941	56.9	-	MPWR03	163	6069	5796	12/14/16	5/6/17	Contig	JCVI	SAMN05956108	GCA_001903105.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/105/GCA_001903105.3_ASM190310v3	-	1316_2199
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.9632	64.2	-	FVTT01	17	4967	4842	3/10/17	3/18/17	Scaffold	SC	SAMEA2144732	GCA_900139225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/225/GCA_900139225.1_10465_1_67	-	682
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23611	64.2	-	FVTV01	23	5247	5095	3/10/17	3/18/17	Scaffold	SC	SAMEA2160938	GCA_900139235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/235/GCA_900139235.1_10465_1_69	-	697
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.66723	57	-	MPWG03	132	5818	5566	12/14/16	5/6/17	Contig	JCVI	SAMN05956097	GCA_001903135.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/135/GCA_001903135.3_ASM190313v3	-	1213_2078
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.89177	39	-	LLGU01	361	3805	3625	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145712	GCA_001415515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/515/GCA_001415515.1_ASM141551v1	-	ABBL093
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.63464	66.3	-	MAZW01	77	6345	6060	10/13/16	3/20/17	Contig	University of Trento	SAMN05272446	GCA_001765865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/865/GCA_001765865.1_ASM176586v1	-	TNCF_106
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.19309	39.6	-	CKKH01	51	2454	2208	3/21/15	3/11/17	Contig	SC	SAMEA1024013	GCA_001138265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/265/GCA_001138265.1_6631_6_6	-	14
Escherichia coli M19	1392864	PRJNA215830	215830	Proteobacteria	Gammaproteobacteria	5.25766	50.2	-	AWQE01	417	5623	5159	9/11/13	2/22/17	Scaffold	"Department of Pediatrics, Washington University School of Medicine"	SAMN02335250	GCA_000471405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/405/GCA_000471405.1_E_coliM19-1.0	24048526	M19
Mycobacterium tuberculosis TB_RSA25	1421941	PRJNA228019	228019	Terrabacteria group	Actinobacteria	4.41345	65.5	-	JKWN01	9	4298	4117	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403466	GCA_000670335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/335/GCA_000670335.1_Myco_tube_TB_RSA25_V1	-	TB_RSA25
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.0069	37.8	-	MKME01	23	3066	2964	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277740	GCA_001759435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/435/GCA_001759435.1_BCW_3814	-	NRRL B-33073
Salmonella enterica subsp. enterica serovar Newport str. DC_10-449	938145	PRJNA61361	61361	Proteobacteria	Gammaproteobacteria	4.81381	52.2	-	APHA01	60	4916	4676	7/9/15	2/27/17	Contig	FDA	SAMN01813908	GCA_001051685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/685/GCA_001051685.1_CFSAN000863_1.0	-	DC_10-449
Staphylococcus aureus M1380	1398005	PRJNA218380	218380	Terrabacteria group	Firmicutes	2.85316	32.8	-	JCXD01	34	3013	2856	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350560	GCA_000548065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/065/GCA_000548065.1_Stap_aure_M1380_V1	-	M1380
Staphylococcus aureus M1382	1398006	PRJNA218381	218381	Terrabacteria group	Firmicutes	2.72683	32.8	-	JCXE01	38	2835	2699	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350561	GCA_000548085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/085/GCA_000548085.1_Stap_aure_M1382_V1	-	M1382
Salmonella enterica subsp. enterica serovar Newport str. DC_10-446	938144	PRJNA61357	61357	Proteobacteria	Gammaproteobacteria	4.81685	52.2	-	APGZ01	54	4932	4681	7/9/15	2/27/17	Contig	FDA	SAMN01813907	GCA_001051695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/695/GCA_001051695.1_CFSAN000862_1.0	-	DC_10-446
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.84215	38.1	-	MKMF01	16	2889	2805	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277741	GCA_001759465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/465/GCA_001759465.1_BCW_3815	-	NRRL B-33077
Mycobacterium tuberculosis TB_RSA26	1421942	PRJNA228020	228020	Terrabacteria group	Actinobacteria	4.40935	65.6	-	JKWM01	1	4281	4116	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403467	GCA_000670355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/355/GCA_000670355.1_Myco_tube_TB_RSA26_V1	-	TB_RSA26
Escherichia coli M20	1392865	PRJNA215830	215830	Proteobacteria	Gammaproteobacteria	5.26839	50.2	-	AWQF01	408	5664	5193	9/11/13	2/22/17	Scaffold	"Department of Pediatrics, Washington University School of Medicine"	SAMN02335254	GCA_000471425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/425/GCA_000471425.1_E_coliM20-1.0	24048526	M20
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.05608	39.7	-	CMPB01	53	2274	2031	3/23/15	3/10/17	Contig	SC	SAMEA2061716	GCA_001138405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/405/GCA_001138405.1_9803_7_47	-	19F
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.63388	66.3	-	MAZX01	69	6340	6097	10/13/16	3/20/17	Contig	University of Trento	SAMN05272447	GCA_001765915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/915/GCA_001765915.1_ASM176591v1	-	TNCF_109
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.89029	39	-	LLGW01	233	3798	3621	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145714	GCA_001415535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/535/GCA_001415535.1_ASM141553v1	-	ABBL095
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.69616	57.1	-	MPXJ03	125	5797	5551	12/14/16	5/6/17	Contig	JCVI	SAMN05956066	GCA_001903175.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/175/GCA_001903175.3_ASM190317v3	-	671_1599
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16472	64.3	-	FVTU01	24	5159	5019	3/10/17	3/18/17	Scaffold	SC	SAMEA2156247	GCA_900139265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/265/GCA_900139265.1_10465_1_73	-	719
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.27078	64.1	-	FSMT01	17	5330	5218	12/14/16	3/21/17	Scaffold	SC	SAMEA2154780	GCA_900139285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/285/GCA_900139285.1_10465_1_72	-	709
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.61072	57.2	-	MPXK03	119	5767	5516	12/14/16	5/6/17	Contig	JCVI	SAMN05956067	GCA_001903195.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/195/GCA_001903195.3_ASM190319v3	-	679_1608
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.13356	39.2	-	LLHE01	418	4073	3820	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145723	GCA_001415595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/595/GCA_001415595.1_ASM141559v1	-	ABBL105
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.63677	66.3	-	MBMI01	103	6350	6146	10/13/16	3/20/17	Contig	University of Trento	SAMN05272452	GCA_001765925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/925/GCA_001765925.1_ASM176592v1	-	TNCF_151M
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.01299	39.7	-	CLTU01	41	2233	2026	3/21/15	3/11/17	Contig	SC	SAMEA1029126	GCA_001138585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/585/GCA_001138585.1_6972_5_16	-	SMRU2632
Escherichia coli M21	1392866	PRJNA215830	215830	Proteobacteria	Gammaproteobacteria	5.16157	50.2	-	AWQG01	410	5555	5072	9/11/13	2/22/17	Scaffold	"Department of Pediatrics, Washington University School of Medicine"	SAMN02335251	GCA_000471445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/445/GCA_000471445.1_E_coliM21-1.0	24048526	M21
Mycobacterium tuberculosis TB_RSA27	1421943	PRJNA228021	228021	Terrabacteria group	Actinobacteria	4.41	65.6	-	JKWL01	5	4287	4101	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403468	GCA_000670375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/375/GCA_000670375.1_Myco_tube_TB_RSA27_V1	-	TB_RSA27
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.92898	37.9	-	MKMG01	20	2926	2854	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277742	GCA_001759485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/485/GCA_001759485.1_BCW_3816	-	NRRL B-33090
Salmonella enterica subsp. enterica serovar Newport str. MA_10EN1469	935708	PRJNA61159	61159	Proteobacteria	Gammaproteobacteria	4.77449	52.1	-	APGY01	58	4883	4644	7/9/15	2/27/17	Contig	FDA	SAMN01813906	GCA_001051705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/705/GCA_001051705.1_CFSAN000861_1.0	-	MA_10EN1469
Staphylococcus aureus M1383	1398007	PRJNA218382	218382	Terrabacteria group	Firmicutes	2.8653	32.9	-	JCXF01	30	3012	2853	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350562	GCA_000548105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/105/GCA_000548105.1_Stap_aure_M1383_V1	-	M1383
Staphylococcus aureus M1386	1398010	PRJNA218385	218385	Terrabacteria group	Firmicutes	2.76311	32.8	-	JCXG01	30	2837	2702	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350565	GCA_000548125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/125/GCA_000548125.1_Stap_aure_M1386_V1	-	M1386
Salmonella enterica subsp. enterica serovar Newport str. DC_10-450	938146	PRJNA61363	61363	Proteobacteria	Gammaproteobacteria	4.771	52.1	-	APHB01	67	4869	4633	7/9/15	2/27/17	Contig	FDA	SAMN01813909	GCA_001051715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/715/GCA_001051715.1_CFSAN000864_1.0	-	DC_10-450
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.91459	38	-	MKMH01	19	2934	2848	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277743	GCA_001759505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/505/GCA_001759505.1_BCW_3817	-	NRRL B-33092
Mycobacterium tuberculosis TB_RSA28	1421944	PRJNA228022	228022	Terrabacteria group	Actinobacteria	4.3707	65.6	-	JKWK01	106	4343	4112	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403469	GCA_000670395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/395/GCA_000670395.1_Myco_tube_TB_RSA28_V1	-	TB_RSA28
Escherichia coli M22	1392867	PRJNA215830	215830	Proteobacteria	Gammaproteobacteria	5.17572	50.2	-	AWQH01	737	5738	5114	9/11/13	2/22/17	Scaffold	"Department of Pediatrics, Washington University School of Medicine"	SAMN02335256	GCA_000471465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/465/GCA_000471465.1_E_coliM22-1.0	24048526	M22
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.04995	39.6	-	CLZL01	48	2278	2061	3/21/15	3/11/17	Contig	SC	SAMEA1028875	GCA_001138685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/685/GCA_001138685.1_6983_8_83	-	SMRU2387
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.63503	66.3	-	MBMJ01	86	6348	6096	10/13/16	3/20/17	Contig	University of Trento	SAMN05272453	GCA_001765955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/955/GCA_001765955.1_ASM176595v1	-	TNCF_154
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.98962	38.9	-	LLHG01	323	3933	3732	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145725	GCA_001415615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/615/GCA_001415615.1_ASM141561v1	-	ABBL107
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.67549	57	-	MPXD03	128	5849	5596	12/14/16	5/6/17	Contig	JCVI	SAMN05956120	GCA_001903205.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/205/GCA_001903205.3_ASM190320v3	-	1483_2404
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.3415	64	-	FSMV01	16	5438	5288	12/14/16	3/21/17	Scaffold	SC	SAMEA2143533	GCA_900139305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/305/GCA_900139305.1_10465_1_76	-	725
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.07292	64.1	-	FVTY01	18	5073	4970	3/10/17	3/18/17	Scaffold	SC	SAMEA2071134	GCA_900139345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/345/GCA_900139345.1_10625_4_10	-	10
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.77088	56.9	-	MPXM03	106	5925	5677	12/14/16	5/6/17	Contig	JCVI	SAMN05956069	GCA_001903215.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/215/GCA_001903215.3_ASM190321v3	-	686_1617
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.96456	39.2	-	LLHH01	309	3923	3731	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145726	GCA_001415645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/645/GCA_001415645.1_ASM141564v1	-	ABBL109
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.6341	66.3	-	MBMK01	62	6334	6061	10/13/16	3/20/17	Contig	University of Trento	SAMN05272454	GCA_001765975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/975/GCA_001765975.1_ASM176597v1	-	TNCF_155
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	1.99477	39.6	-	CKUP01	42	2189	1981	3/21/15	3/10/17	Contig	SC	SAMEA1025793	GCA_001138745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/745/GCA_001138745.1_6823_2_24	-	SMRU1896
Escherichia coli M23	1392868	PRJNA215830	215830	Proteobacteria	Gammaproteobacteria	5.27933	50.2	-	AWQI01	573	5692	5212	9/11/13	2/22/17	Scaffold	"Department of Pediatrics, Washington University School of Medicine"	SAMN02335230	GCA_000471485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/485/GCA_000471485.1_E_coliM23-1.0	24048526	M23
Mycobacterium tuberculosis TB_RSA29	1421945	PRJNA228023	228023	Terrabacteria group	Actinobacteria	4.39623	65.6	-	JKWJ01	7	4279	4104	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403470	GCA_000670415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/415/GCA_000670415.1_Myco_tube_TB_RSA29_V1	-	TB_RSA29
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.87903	37.9	-	MKMI01	17	2893	2825	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277744	GCA_001759515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/515/GCA_001759515.1_BCW_3818	-	NRRL B-33095
Salmonella enterica subsp. enterica serovar Newport str. A182RVB	984252	PRJNA62869	62869	Proteobacteria	Gammaproteobacteria	4.72272	52.1	-	APHC01	137	4845	4478	7/9/15	2/27/17	Contig	FDA	SAMN01816136	GCA_001051765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/765/GCA_001051765.1_CFSAN000927_1.0	-	A182RVB
Staphylococcus aureus M1387	1398011	PRJNA218386	218386	Terrabacteria group	Firmicutes	2.84399	32.8	-	JCXH01	27	2989	2839	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350566	GCA_000548145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/145/GCA_000548145.1_Stap_aure_M1387_V1	-	M1387
Staphylococcus aureus M1390	1398013	PRJNA218388	218388	Terrabacteria group	Firmicutes	2.89744	32.9	-	JCXI01	20	3041	2866	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350568	GCA_000548165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/165/GCA_000548165.1_Stap_aure_M1390_V1	-	M1390
Salmonella enterica subsp. enterica serovar Newport str. Pond080-2TTA	984251	PRJNA62867	62867	Proteobacteria	Gammaproteobacteria	4.83086	52.1	-	APHD01	266	5057	4653	7/9/15	2/27/17	Contig	FDA	SAMN01816135	GCA_001051775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/775/GCA_001051775.1_CFSAN000928_1.0	-	Pond080-2TTA
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.97183	37.8	-	MKMJ01	21	3006	2904	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277745	GCA_001759545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/545/GCA_001759545.1_BCW_3819	-	NRRL B-33100
Mycobacterium tuberculosis TB_RSA30	1421946	PRJNA228024	228024	Terrabacteria group	Actinobacteria	4.41613	65.5	-	JKWI01	25	4300	4103	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403471	GCA_000670435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/435/GCA_000670435.1_Myco_tube_TB_RSA30_V1	-	TB_RSA30
Escherichia coli K1	1392869	PRJNA215830	215830	Proteobacteria	Gammaproteobacteria	5.17571	50.2	-	AWQJ01	398	5552	5092	9/11/13	2/22/17	Scaffold	"Department of Pediatrics, Washington University School of Medicine"	SAMN02335242	GCA_000471505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/505/GCA_000471505.1_E_coliK1-1.0	24048526	K1
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.10534	39.6	-	CMPJ01	64	2320	2044	3/23/15	3/10/17	Contig	SC	SAMEA2061506	GCA_001138785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/785/GCA_001138785.1_9803_7_63	-	type strain: N
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.6346	66.3	-	MBMM01	119	6365	6049	10/13/16	3/20/17	Contig	University of Trento	SAMN05272456	GCA_001765985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/985/GCA_001765985.1_ASM176598v1	-	TNCF_165
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.70501	38.7	-	LLHI01	282	3537	3366	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145727	GCA_001415665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/665/GCA_001415665.1_ASM141566v1	-	ABBL110
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.3671	57.4	-	MPXE03	72	5435	5253	12/14/16	5/6/17	Contig	JCVI	SAMN05956121	GCA_001903255.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/255/GCA_001903255.3_ASM190325v3	-	1486_2407
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.24889	64.1	-	FSMX01	35	5224	5085	12/14/16	3/21/17	Scaffold	SC	SAMEA2071135	GCA_900139365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/365/GCA_900139365.1_10625_4_13	-	13
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.03386	64.1	-	FVTZ01	25	5022	4887	3/10/17	3/18/17	Scaffold	SC	SAMEA1966176	GCA_900139405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/405/GCA_900139405.1_10625_4_4	-	4
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.62126	57.1	-	MPXH03	116	5793	5531	12/14/16	5/6/17	Contig	JCVI	SAMN05956064	GCA_001903265.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/265/GCA_001903265.3_ASM190326v3	-	600_1500
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.02776	39.2	-	LLHK01	333	3971	3767	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145729	GCA_001415695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/695/GCA_001415695.1_ASM141569v1	-	ABBL113
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.63562	66.3	-	MBML01	71	6338	6067	10/13/16	3/20/17	Contig	University of Trento	SAMN05272455	GCA_001765995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/765/995/GCA_001765995.1_ASM176599v1	-	TNCF_155_1
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.08517	39.5	-	CMKG01	49	2290	2066	3/22/15	3/11/17	Contig	SC	SAMEA1029288	GCA_001138805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/805/GCA_001138805.1_7054_4_15	-	SMRU3039
Escherichia coli K2	1392870	PRJNA215830	215830	Proteobacteria	Gammaproteobacteria	5.26196	50.2	-	AWQK01	402	5666	5182	9/11/13	2/22/17	Scaffold	"Department of Pediatrics, Washington University School of Medicine"	SAMN02335252	GCA_000471525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/525/GCA_000471525.1_E_coliK2-1.0	24048526	K2
Mycobacterium tuberculosis TB_RSA31	1421947	PRJNA228025	228025	Terrabacteria group	Actinobacteria	4.40429	65.5	-	JKWH01	15	4285	4096	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403472	GCA_000670455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/455/GCA_000670455.1_Myco_tube_TB_RSA31_V1	-	TB_RSA31
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.86852	38.1	-	MKMK01	16	2884	2807	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277746	GCA_001759555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/555/GCA_001759555.1_BCW_3820	-	NRRL B-33105
Salmonella enterica subsp. enterica serovar Newport str. 36803	984246	PRJNA62857	62857	Proteobacteria	Gammaproteobacteria	4.80391	52.1	-	APHF01	125	4939	4624	7/9/15	2/27/17	Contig	FDA	SAMN01816130	GCA_001051795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/795/GCA_001051795.1_ASM105179v1	-	36803
Staphylococcus aureus M1391	1398014	PRJNA218389	218389	Terrabacteria group	Firmicutes	2.83579	32.9	-	JCXJ01	41	2987	2819	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350569	GCA_000548185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/185/GCA_000548185.1_Stap_aure_M1391_V1	-	M1391
Staphylococcus aureus M1392	1398015	PRJNA218390	218390	Terrabacteria group	Firmicutes	2.91407	32.9	-	JCXK01	23	3058	2893	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350570	GCA_000548205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/205/GCA_000548205.1_Stap_aure_M1392_V1	-	M1392
Salmonella enterica subsp. enterica serovar Newport str. S103RVX	984253	PRJNA62871	62871	Proteobacteria	Gammaproteobacteria	4.77096	52.1	-	APHE01	127	4916	4491	7/9/15	2/27/17	Contig	FDA	SAMN01813912	GCA_001051815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/815/GCA_001051815.1_CFSAN000929_1.0	-	S103RVX
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.91789	37.9	-	MKMM01	28	2941	2861	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277748	GCA_001759605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/605/GCA_001759605.1_BCW_3822	-	NRRL B-33126
Mycobacterium tuberculosis TB_RSA32	1421948	PRJNA228026	228026	Terrabacteria group	Actinobacteria	4.40566	65.5	-	JKWG01	13	4285	4099	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403473	GCA_000670475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/475/GCA_000670475.1_Myco_tube_TB_RSA32_V1	-	TB_RSA32
Escherichia coli WC1	1392871	PRJNA215830	215830	Proteobacteria	Gammaproteobacteria	5.26638	50.1	-	AWQL01	594	5625	5207	9/11/13	2/22/17	Scaffold	"Department of Pediatrics, Washington University School of Medicine"	SAMN02335240	GCA_000471545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/545/GCA_000471545.1_E_coliWC1-1.0	24048526	WC1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06573	39.6	-	CNYA02	142	2253	2033	3/23/15	3/11/17	Contig	SC	SAMEA1463282	GCA_001139005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/005/GCA_001139005.2_7553_4_28	-	NP7004
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.6453	66.3	-	MBMP01	111	6361	6054	10/13/16	3/20/17	Contig	University of Trento	SAMN05272459	GCA_001766035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/035/GCA_001766035.1_ASM176603v1	-	TNCF_174
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.1528	39.2	-	LLHL01	380	4119	3916	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145730	GCA_001415715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/715/GCA_001415715.1_ASM141571v1	-	ABBL114
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.64976	57.2	-	MPXI03	120	5776	5535	12/14/16	5/6/17	Contig	JCVI	SAMN05956065	GCA_001903285.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/285/GCA_001903285.3_ASM190328v3	-	660_1586
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.22666	64.2	-	FSNF01	29	5251	5099	12/14/16	3/21/17	Scaffold	SC	SAMEA2071202	GCA_900139475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/475/GCA_900139475.1_10625_5_3	-	88
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.08909	64.1	-	FSNG01	15	5118	4992	12/14/16	3/21/17	Scaffold	SC	SAMEA2070819	GCA_900139505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/505/GCA_900139505.1_10625_5_44	-	129
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.66618	57.1	-	MPWV03	119	5802	5565	12/14/16	5/6/17	Contig	JCVI	SAMN05956112	GCA_001903295.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/295/GCA_001903295.3_ASM190329v3	-	1398_2291
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.97105	39.3	-	LLHM01	579	3933	3762	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145731	GCA_001415735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/735/GCA_001415735.1_ASM141573v1	-	ABBL115
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.62808	66.3	-	MBMO01	91	6353	6043	10/13/16	3/20/17	Contig	University of Trento	SAMN05272458	GCA_001766045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/045/GCA_001766045.1_ASM176604v1	-	TNCF_167_1
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.0144	39.7	-	CPLD01	75	2209	1998	3/23/15	3/4/17	Contig	SC	SAMEA1020618	GCA_001139025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/025/GCA_001139025.1_6187_6_8	-	LMG1427
Escherichia coli WC2	1392872	PRJNA215830	215830	Proteobacteria	Gammaproteobacteria	5.25549	50.2	-	AWQM01	587	5639	5192	9/11/13	2/22/17	Scaffold	"Department of Pediatrics, Washington University School of Medicine"	SAMN02335235	GCA_000471565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/565/GCA_000471565.1_E_coliWC2-1.0	24048526	WC2
Mycobacterium tuberculosis TB_RSA33	1421949	PRJNA228027	228027	Terrabacteria group	Actinobacteria	4.41085	65.5	-	JKWF01	11	4288	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403474	GCA_000670495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/495/GCA_000670495.1_Myco_tube_TB_RSA33_V1	-	TB_RSA33
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.96167	37.9	-	MKMN01	22	3003	2929	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277749	GCA_001759625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/625/GCA_001759625.1_BCW_3823	-	NRRL B-33140
Salmonella enterica subsp. enterica serovar Newport str. PRS_2010_0624	945539	PRJNA61939	61939	Proteobacteria	Gammaproteobacteria	4.74359	52.2	-	APHG01	191	4869	4544	7/9/15	2/27/17	Contig	FDA	SAMN01816126	GCA_001051845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/845/GCA_001051845.1_CFSAN001243_1.0	-	PRS_2010_0624
Staphylococcus aureus M1395	1398016	PRJNA218391	218391	Terrabacteria group	Firmicutes	2.88716	32.8	-	JCXL01	64	3075	2889	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350571	GCA_000548225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/225/GCA_000548225.1_Stap_aure_M1395_V1	-	M1395
Staphylococcus aureus M1396	1398017	PRJNA218392	218392	Terrabacteria group	Firmicutes	2.85252	32.9	-	JCXM01	13	3001	2837	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350572	GCA_000548245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/245/GCA_000548245.1_Stap_aure_M1396_V1	-	M1396
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB4240	222606	Proteobacteria	Gammaproteobacteria	4.71772	52.1	-	CELU01	44	4876	4523	3/21/15	2/27/17	Contig	SC	SAMEA2148620	GCA_001078725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/725/GCA_001078725.1_10541_1_60	-	ERS325052
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.00976	37.8	-	MKMO01	38	3076	2987	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277621	GCA_001759645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/645/GCA_001759645.1_BCW_3824	-	NRRL B-33145
Mycobacterium tuberculosis TB_RSA34	1421950	PRJNA228028	228028	Terrabacteria group	Actinobacteria	4.40413	65.5	-	JKWE01	12	4289	4104	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403475	GCA_000670515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/515/GCA_000670515.1_Myco_tube_TB_RSA34_V1	-	TB_RSA34
Escherichia coli Wa1	1392873	PRJNA215830	215830	Proteobacteria	Gammaproteobacteria	5.23617	50.2	-	AWQN01	611	5595	5163	9/11/13	2/22/17	Scaffold	"Department of Pediatrics, Washington University School of Medicine"	SAMN02335231	GCA_000471585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/585/GCA_000471585.1_E_coliWa1-1.0	24048526	Wa1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09745	39.6	-	CNOP02	173	2283	2076	3/22/15	3/11/17	Contig	SC	SAMEA1032638	GCA_001139065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/065/GCA_001139065.2_6925_2_91	-	R34-3073
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.63457	66.3	-	MBMN01	73	6350	6048	10/13/16	3/20/17	Contig	University of Trento	SAMN05272457	GCA_001766075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/075/GCA_001766075.1_ASM176607v1	-	TNCF_167
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.06427	39.2	-	LLHN01	436	4031	3837	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145732	GCA_001415765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/765/GCA_001415765.1_ASM141576v1	-	ABBL116
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.67482	57.2	-	MPWZ03	125	5799	5512	12/14/16	5/6/17	Contig	JCVI	SAMN05956116	GCA_001903335.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/335/GCA_001903335.3_ASM190333v3	-	1430_2335
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.24075	64.1	-	FVUV01	16	5335	5127	3/10/17	3/18/17	Scaffold	SC	SAMEA2153606	GCA_900139715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/715/GCA_900139715.1_10660_1_16	-	519
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.09766	64.1	-	FVUQ01	13	5099	4994	3/10/17	3/18/17	Scaffold	SC	SAMEA1968765	GCA_900139725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/725/GCA_900139725.1_10660_1_13	-	718
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.48452	57.2	-	MPWW03	90	5587	5380	12/14/16	5/6/17	Contig	JCVI	SAMN05956113	GCA_001903355.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/355/GCA_001903355.3_ASM190335v3	-	1416_2314
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.14413	39.1	-	LLHO01	629	4075	3816	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145733	GCA_001415785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/785/GCA_001415785.1_ASM141578v1	-	ABBL117
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.64204	66.3	-	MBMQ01	118	6380	6037	10/13/16	3/20/17	Contig	University of Trento	SAMN05272460	GCA_001766085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/085/GCA_001766085.1_ASM176608v1	-	TNCF_175
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.14946	39.5	-	CMNQ01	73	2407	2143	3/22/15	3/4/17	Contig	SC	SAMEA2061467	GCA_001139085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/085/GCA_001139085.1_9803_7_1	-	46
Escherichia coli Wa2	1392874	PRJNA215830	215830	Proteobacteria	Gammaproteobacteria	5.28686	50.2	-	AWQO01	605	5658	5230	9/11/13	2/22/17	Scaffold	"Department of Pediatrics, Washington University School of Medicine"	SAMN02335232	GCA_000471605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/471/605/GCA_000471605.1_E_coliWa2-1.0	24048526	Wa2
Mycobacterium tuberculosis TB_RSA35	1421951	PRJNA228029	228029	Terrabacteria group	Actinobacteria	4.43547	65.4	-	JKWD01	8	4294	4112	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403476	GCA_000670535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/535/GCA_000670535.1_Myco_tube_TB_RSA35_V1	-	TB_RSA35
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.89783	37.9	-	MKMP01	14	2915	2850	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277750	GCA_001759665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/665/GCA_001759665.1_BCW_3825	-	NRRL B-33176
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72798	52	-	CIOL01	40	4890	4536	3/21/15	2/27/17	Contig	SC	SAMEA2059531	GCA_001078945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/945/GCA_001078945.1_10060_6_22	-	UI11562
Staphylococcus aureus M1397	1398018	PRJNA218393	218393	Terrabacteria group	Firmicutes	2.75843	32.8	-	JCXN01	21	2859	2702	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350573	GCA_000548265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/265/GCA_000548265.1_Stap_aure_M1397_V1	-	M1397
Staphylococcus aureus M1398	1398019	PRJNA218394	218394	Terrabacteria group	Firmicutes	2.86004	32.9	-	JCXO01	18	2992	2825	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350574	GCA_000548285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/285/GCA_000548285.1_Stap_aure_M1398_V1	-	M1398
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.78766	52.1	-	CIPQ01	49	4957	4584	3/21/15	2/27/17	Contig	SC	SAMEA2056845	GCA_001078985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/985/GCA_001078985.1_10060_6_81	-	129-0230-K
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.8926	38.1	-	MKMQ01	12	2905	2814	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277751	GCA_001759685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/685/GCA_001759685.1_BCW_3826	-	NRRL B-33177
Mycobacterium tuberculosis TB_RSA36	1421952	PRJNA228030	228030	Terrabacteria group	Actinobacteria	4.40209	65.5	-	JKWC01	5	4296	4112	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403477	GCA_000670555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/555/GCA_000670555.1_Myco_tube_TB_RSA36_V1	-	TB_RSA36
Escherichia coli 95JB1	1333535	PRJNA202851	202851	Proteobacteria	Gammaproteobacteria	5.34405	50.4015	plasmid pO111_4:NZ_AWFJ01000122.1/AWFJ01000122.1; plasmid pO111_5:NZ_AWFJ01000135.1/AWFJ01000135.1	AWFJ01	178	5871	5305	8/29/13	2/22/17	Scaffold	University of Adelaide	SAMN02314371	GCA_000478705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/705/GCA_000478705.1_95JB1	-	95JB1
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.98564	39.7	-	CKNN01	45	2162	1936	3/21/15	3/15/17	Contig	SC	SAMEA1024178	GCA_001139105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/105/GCA_001139105.1_6664_1_16	-	type strain: N
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.62979	66.3	-	MAKK01	53	6334	6083	10/13/16	3/20/17	Contig	University of Trento	SAMN05272451	GCA_001766115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/115/GCA_001766115.1_ASM176611v1	-	TNCF_151
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.99638	39.1	-	LLHP01	623	3893	3650	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145734	GCA_001415805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/805/GCA_001415805.1_ASM141580v1	-	ABBL118
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.46857	57.3	-	MPWT03	100	5571	5362	12/14/16	5/6/17	Contig	JCVI	SAMN05956110	GCA_001903365.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/365/GCA_001903365.3_ASM190336v3	-	1345_2229
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.94506	64.3	-	FVUT01	15	4901	4766	3/10/17	3/18/17	Scaffold	SC	SAMEA2154749	GCA_900139735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/735/GCA_900139735.1_10660_1_17	-	614
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.26489	64.2	-	FVUW01	43	5310	5166	3/10/17	3/18/17	Scaffold	SC	SAMEA2142752	GCA_900139745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/745/GCA_900139745.1_10660_1_19	-	720
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.53046	57.2	-	MPWX03	97	5645	5427	12/14/16	5/6/17	Contig	JCVI	SAMN05956114	GCA_001903385.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/385/GCA_001903385.3_ASM190338v3	-	1423_2323
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.06338	39.3	-	LLHR01	541	4000	3794	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145736	GCA_001415815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/815/GCA_001415815.1_ASM141581v1	-	ABBL121
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.63621	66.3	-	MAUO01	138	6368	6103	10/13/16	3/20/17	Contig	University of Trento	SAMN05272422	GCA_001766125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/125/GCA_001766125.1_ASM176612v1	-	TNCF_3
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06522	39.5	-	CNPD02	178	2227	2014	3/22/15	3/11/17	Contig	SC	SAMEA1032553	GCA_001139365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/365/GCA_001139365.2_6930_8_21	-	R34-3027
Escherichia coli 110957	1268975	PRJNA183798	183798	Proteobacteria	Gammaproteobacteria	5.31443	50.4	-	AXUE01	241	5544	5158	10/25/13	2/22/17	Scaffold	Washington University	SAMN02436744	GCA_000485615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/615/GCA_000485615.1_ASM48561v1	-	110957
Mycobacterium tuberculosis TB_RSA37	1421953	PRJNA228031	228031	Terrabacteria group	Actinobacteria	4.43494	65.5	-	JKWB01	10	4321	4126	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403478	GCA_000670575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/575/GCA_000670575.1_Myco_tube_TB_RSA37_V1	-	TB_RSA37
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.90229	38	-	MKMR01	17	2908	2840	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277752	GCA_001759705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/705/GCA_001759705.1_BCW_3827	-	NRRL B-33179
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82669	52	-	CIRQ01	42	5015	4654	3/21/15	2/27/17	Contig	SC	SAMEA2066176	GCA_001079045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/045/GCA_001079045.1_10071_8_13	-	Gen-0013
Staphylococcus aureus M1400	1398020	PRJNA218395	218395	Terrabacteria group	Firmicutes	2.86951	32.7	-	JCXP01	68	3033	2881	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350575	GCA_000548305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/305/GCA_000548305.1_Stap_aure_M1400_V1	-	M1400
Staphylococcus aureus M1401	1398021	PRJNA218396	218396	Terrabacteria group	Firmicutes	2.88795	32.8	-	JCXQ01	40	3054	2875	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350576	GCA_000548325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/325/GCA_000548325.1_Stap_aure_M1401_V1	-	M1401
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69967	52.1	-	CION01	42	4853	4499	3/21/15	2/27/17	Contig	SC	SAMEA2056700	GCA_001079065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/065/GCA_001079065.1_10060_6_27	-	UI13797
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.98177	38.1	-	MKMS01	20	3051	2957	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277753	GCA_001759725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/725/GCA_001759725.1_BCW_3828	-	NRRL B-33181
Mycobacterium tuberculosis TB_RSA38	1421954	PRJNA228032	228032	Terrabacteria group	Actinobacteria	4.40118	65.5	-	JKWA01	5	4286	4099	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403479	GCA_000670595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/595/GCA_000670595.1_Myco_tube_TB_RSA38_V1	-	TB_RSA38
Escherichia coli 113290	1268976	PRJNA183799	183799	Proteobacteria	Gammaproteobacteria	5.36809	50.4	-	AXUF01	189	5550	5167	10/25/13	2/22/17	Scaffold	Washington University	SAMN02436745	GCA_000485635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/635/GCA_000485635.1_ASM48563v1	-	113290
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.05757	39.7	-	CKJL01	56	2264	2045	3/21/15	3/4/17	Contig	SC	SAMEA1023828	GCA_001139405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/405/GCA_001139405.1_6631_5_19	-	11A
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.63783	66.3	-	MBMR01	61	6340	6033	10/13/16	3/20/17	Contig	University of Trento	SAMN05272461	GCA_001766135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/135/GCA_001766135.1_ASM176613v1	-	TNCF_176
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.9378	39	-	LLHS01	354	3751	3589	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145737	GCA_001415835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/835/GCA_001415835.1_ASM141583v1	-	ABBL122
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.58816	57.1	-	MPWU03	137	5739	5498	12/14/16	5/6/17	Contig	JCVI	SAMN05956111	GCA_001903415.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/415/GCA_001903415.3_ASM190341v3	-	1378_2267
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.19859	64.2	-	FSNN01	32	5217	5057	12/14/16	3/21/17	Scaffold	SC	SAMEA2142656	GCA_900139765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/765/GCA_900139765.1_10660_1_2	-	623
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.12682	64.3	-	FVUY01	15	5178	5040	3/10/17	3/18/17	Scaffold	SC	SAMEA2156457	GCA_900139775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/775/GCA_900139775.1_10660_1_23	-	651
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.51846	57.2	-	MPWO03	102	5644	5422	12/14/16	5/6/17	Contig	JCVI	SAMN05956105	GCA_001903435.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/435/GCA_001903435.3_ASM190343v3	-	1293_2172
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.16998	38.9	-	LLHX01	411	4138	3857	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145742	GCA_001415875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/875/GCA_001415875.1_ASM141587v1	-	ABBL127
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.63911	66.3	-	MAKM01	67	6343	6173	10/13/16	3/20/17	Contig	University of Trento	SAMN05272434	GCA_001766145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/145/GCA_001766145.1_ASM176614v1	-	TNCF_32
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.04962	39.7	-	CRNS01	63	2253	2032	3/23/15	3/10/17	Contig	SC	SAMEA1024996	GCA_001139485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/485/GCA_001139485.1_6755_4_4	-	SMRU1132
Escherichia coli 113303	1268978	PRJNA183801	183801	Proteobacteria	Gammaproteobacteria	5.02297	50.7	-	AXUG01	101	5199	4917	10/25/13	2/22/17	Scaffold	Washington University	SAMN02436736	GCA_000485655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/655/GCA_000485655.1_ASM48565v1	-	113303
Mycobacterium tuberculosis TB_RSA39	1421955	PRJNA228033	228033	Terrabacteria group	Actinobacteria	4.42709	65.5	-	JKVZ01	6	4291	4121	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403480	GCA_000670615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/615/GCA_000670615.1_Myco_tube_TB_RSA39_V1	-	TB_RSA39
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.86739	38.1	-	MKMT01	21	2866	2788	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277754	GCA_001759745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/745/GCA_001759745.1_BCW_3829	-	NRRL B-33182
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69688	52.1	-	CIPF01	54	4844	4497	3/21/15	2/27/17	Contig	SC	SAMEA2055262	GCA_001079145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/145/GCA_001079145.1_10060_6_56	-	UI5275
Staphylococcus aureus M1402	1398022	PRJNA218397	218397	Terrabacteria group	Firmicutes	2.85584	32.8	-	JCXR01	64	3018	2838	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350577	GCA_000548345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/345/GCA_000548345.1_Stap_aure_M1402_V1	-	M1402
Staphylococcus aureus M1403	1398023	PRJNA218398	218398	Terrabacteria group	Firmicutes	2.86852	32.8	-	JCXS01	43	3030	2856	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350578	GCA_000548365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/365/GCA_000548365.1_Stap_aure_M1403_V1	-	M1403
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74277	52.1	-	CIOX01	42	4930	4576	3/21/15	2/27/17	Contig	SC	SAMEA1966168	GCA_001079165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/165/GCA_001079165.1_10060_6_46	-	UI3862
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.82279	38.2	-	MKMV01	13	2827	2725	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277756	GCA_001759785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/785/GCA_001759785.1_BCW_3831	-	NRRL B-33184
Mycobacterium tuberculosis TB_RSA40	1421956	PRJNA228034	228034	Terrabacteria group	Actinobacteria	4.41782	65.5	-	JKVY01	10	4282	4115	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403481	GCA_000670635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/635/GCA_000670635.1_Myco_tube_TB_RSA40_V1	-	TB_RSA40
Escherichia coli 907357	1268979	PRJNA183802	183802	Proteobacteria	Gammaproteobacteria	4.96701	50.7	-	AXUH01	112	5130	4851	10/25/13	2/22/17	Scaffold	Washington University	SAMN02436746	GCA_000485675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/675/GCA_000485675.1_ASM48567v1	-	907357
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00948	39.7	-	CNUT02	118	2182	1982	3/22/15	3/5/17	Contig	SC	SAMEA1032586	GCA_001139545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/545/GCA_001139545.2_6999_6_4	-	242588
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.63819	66.3	-	MAKL01	59	6341	6166	10/13/16	3/20/17	Contig	University of Trento	SAMN05272431	GCA_001766195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/195/GCA_001766195.1_ASM176619v1	-	TNCF_16
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.91418	39.2	-	LLGV01	405	4000	3547	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145713	GCA_001415915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/915/GCA_001415915.1_ASM141591v1	-	ABBL094
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.65783	57.1	-	MPWQ03	133	5803	5563	12/14/16	5/6/17	Contig	JCVI	SAMN05956107	GCA_001903445.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/445/GCA_001903445.3_ASM190344v3	-	1315_2198
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.04903	64.2	-	FSNP01	21	5027	4893	12/14/16	3/21/17	Scaffold	SC	SAMEA2162933	GCA_900139785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/785/GCA_900139785.1_10660_1_24	-	529
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.19228	64.1	-	FSNQ01	16	5263	5095	12/14/16	3/21/17	Scaffold	SC	SAMEA2149268	GCA_900139805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/805/GCA_900139805.1_10660_1_25	-	643
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.82854	56.8	-	MPWI03	115	5970	5714	12/14/16	5/6/17	Contig	JCVI	SAMN05956099	GCA_001903465.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/465/GCA_001903465.3_ASM190346v3	-	1239_2106
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.91368	39	-	LLGY01	287	3819	3643	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145716	GCA_001415965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/965/GCA_001415965.1_ASM141596v1	-	ABBL097
Pseudomonas aeruginosa	287	PRJNA326244	326244	Proteobacteria	Gammaproteobacteria	6.62507	66.3	-	MAZD01	157	6374	6050	10/13/16	3/20/17	Contig	University of Trento	SAMN05272448	GCA_001766205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/205/GCA_001766205.1_ASM176620v1	-	TNCF_130
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	1.93803	39.7	-	CPPR01	274	2109	1905	3/23/15	3/11/17	Contig	SC	SAMEA1020769	GCA_001139585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/585/GCA_001139585.1_6237_8_12	-	S-052
Escherichia coli 907713	1268986	PRJNA183809	183809	Proteobacteria	Gammaproteobacteria	5.4683	50.5	-	AXUI01	185	5834	5489	10/25/13	2/22/17	Scaffold	Washington University	SAMN02436810	GCA_000485695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/695/GCA_000485695.1_ASM48569v1	-	907713
Mycobacterium tuberculosis TB_RSA41	1421957	PRJNA228035	228035	Terrabacteria group	Actinobacteria	4.41073	65.6	-	JKVX01	18	4293	4112	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403482	GCA_000670655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/655/GCA_000670655.1_Myco_tube_TB_RSA41_V1	-	TB_RSA41
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.88573	38	-	MKMW01	14	2891	2816	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277757	GCA_001759805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/805/GCA_001759805.1_BCW_3832	-	NRRL B-33185
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74508	52.1	-	CIQQ01	47	4911	4541	3/21/15	2/27/17	Contig	SC	SAMEA2057112	GCA_001079225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/225/GCA_001079225.1_10071_3_47	-	493790
Staphylococcus aureus M1406	1398025	PRJNA218400	218400	Terrabacteria group	Firmicutes	2.82889	32.8	-	JCXT01	51	2965	2787	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350580	GCA_000548385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/385/GCA_000548385.1_Stap_aure_M1406_V1	-	M1406
Staphylococcus aureus M1408	1398026	PRJNA218401	218401	Terrabacteria group	Firmicutes	2.87701	32.7	-	JCXU01	65	3027	2889	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350581	GCA_000548405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/405/GCA_000548405.1_Stap_aure_M1408_V1	-	M1408
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7217	52	-	CITY01	39	4870	4513	3/21/15	2/27/17	Contig	SC	SAMEA2064348	GCA_001079245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/245/GCA_001079245.1_10071_8_78	-	2010K-0548
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.94209	37.9	-	MKMX01	25	2973	2899	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277758	GCA_001759825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/825/GCA_001759825.1_BCW_3833	-	NRRL B-33186
Mycobacterium tuberculosis TB_RSA42	1421958	PRJNA228036	228036	Terrabacteria group	Actinobacteria	4.40307	65.5	-	JKVW01	9	4292	4111	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403483	GCA_000670675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/675/GCA_000670675.1_Myco_tube_TB_RSA42_V1	-	TB_RSA42
Escherichia coli 907779	1268988	PRJNA183811	183811	Proteobacteria	Gammaproteobacteria	5.14644	50.7	-	AXUJ01	148	5404	5078	10/25/13	2/22/17	Scaffold	Washington University	SAMN02436811	GCA_000485715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/715/GCA_000485715.1_ASM48571v1	-	907779
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.11836	39.5	-	CNSX02	168	2282	2072	3/23/15	3/11/17	Contig	SC	SAMEA1032710	GCA_001139625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/625/GCA_001139625.2_6999_4_10	-	103453
Pseudomonas aeruginosa	287	PRJNA310738	310738	Proteobacteria	Gammaproteobacteria	6.84334	66.0483	plasmid pPA3448:NZ_CM007350.1/CM007350.1	LVWC01	3	6559	6387	10/20/16	3/20/17	Contig	LNCC	SAMN04455121	GCA_001802735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/802/735/GCA_001802735.1_ASM180273v1	-	PA3448
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.94498	38.9	-	LLHA01	256	3856	3631	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145719	GCA_001415985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/415/985/GCA_001415985.1_ASM141598v1	-	ABBL100
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.57419	57.2	-	MPXQ03	101	5677	5452	12/14/16	5/6/17	Contig	JCVI	SAMN05956073	GCA_001903495.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/495/GCA_001903495.3_ASM190349v3	-	720_1668
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.12732	64.2	-	FVUZ01	17	5206	5045	3/10/17	3/18/17	Scaffold	SC	SAMEA2159674	GCA_900139835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/835/GCA_900139835.1_10660_1_28	-	730
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.77721	64	-	FVVB01	36	5973	5782	3/10/17	3/18/17	Scaffold	SC	SAMEA2161603	GCA_900139845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/845/GCA_900139845.1_10660_1_30	-	716
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.55354	57.2	-	MPWD03	134	5707	5454	12/14/16	5/6/17	Contig	JCVI	SAMN05956094	GCA_001903515.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/515/GCA_001903515.3_ASM190351v3	-	1192_2063
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.95257	39.1	-	LLHB01	447	3860	3611	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145720	GCA_001416005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/005/GCA_001416005.1_ASM141600v1	-	ABBL101
Pseudomonas aeruginosa	287	PRJNA310743	310743	Proteobacteria	Gammaproteobacteria	6.64378	66.2	-	LVXB01	3	6334	6168	10/21/16	3/20/17	Contig	LNCC	SAMN04455163	GCA_001806505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/806/505/GCA_001806505.1_ASM180650v1	-	PA12117
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07997	39.6	-	CODY02	154	2264	2061	3/23/15	3/5/17	Contig	SC	SAMEA1463250	GCA_001139645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/645/GCA_001139645.2_7622_4_35	-	LE4117
Escherichia coli 909945-2	1269007	PRJNA183830	183830	Proteobacteria	Gammaproteobacteria	4.962	50.6	-	AXUK01	212	5129	4809	10/25/13	2/22/17	Scaffold	Washington University	SAMN02436802	GCA_000485735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/485/735/GCA_000485735.1_ASM48573v1	-	909945-2
Mycobacterium tuberculosis TB_RSA43	1421959	PRJNA228037	228037	Terrabacteria group	Actinobacteria	4.41043	65.5	-	JKVV01	22	4324	4124	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403484	GCA_000670695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/695/GCA_000670695.1_Myco_tube_TB_RSA43_V1	-	TB_RSA43
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.96665	38.1	-	MKMY01	17	3025	2952	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277759	GCA_001759835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/835/GCA_001759835.1_BCW_3834	-	NRRL B-33187
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73083	52	-	CIQD01	56	4892	4528	3/21/15	2/27/17	Contig	SC	SAMEA2056053	GCA_001079305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/305/GCA_001079305.1_10071_3_21	-	TY647
Staphylococcus aureus M1409	1398027	PRJNA218402	218402	Terrabacteria group	Firmicutes	2.85089	32.8	-	JCXV01	47	3008	2847	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350582	GCA_000548425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/425/GCA_000548425.1_Stap_aure_M1409_V1	-	M1409
Staphylococcus aureus M1410	1398028	PRJNA218403	218403	Terrabacteria group	Firmicutes	2.85809	32.8	-	JCXW01	51	3008	2834	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350583	GCA_000548445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/445/GCA_000548445.1_Stap_aure_M1410_V1	-	M1410
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7199	52	-	CIRY01	41	4870	4522	3/21/15	2/27/17	Contig	SC	SAMEA2066175	GCA_001079325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/325/GCA_001079325.1_10071_8_10	-	Gen-0010
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.85808	38.2	-	MKMZ01	10	2848	2756	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277760	GCA_001759865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/865/GCA_001759865.1_BCW_3835	-	NRRL B-33188
Mycobacterium tuberculosis TB_RSA44	1421960	PRJNA228038	228038	Terrabacteria group	Actinobacteria	4.39842	65.6	-	JKVU01	8	4283	4110	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403485	GCA_000670715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/715/GCA_000670715.1_Myco_tube_TB_RSA44_V1	-	TB_RSA44
Escherichia coli HVH 50 (4-2593475)	1280998	PRJNA186083	186083	Proteobacteria	Gammaproteobacteria	5.21551	50.9	-	AYHF01	9	5266	4898	10/29/13	2/23/17	Scaffold	Broad Institute	SAMN01885710	GCA_000488015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/015/GCA_000488015.1_Esch_coli_HVH_50_4-2593475_V1	-	HVH 50 (4-2593475)
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.15074	39.8	-	CKXV01	62	2380	2157	3/21/15	3/11/17	Contig	SC	SAMEA1026034	GCA_001139825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/825/GCA_001139825.1_6823_7_18	-	SMRU2010
Pseudomonas aeruginosa	287	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	6.90017	66	-	MPBP01	3	6583	6321	11/10/16	3/20/17	Contig	Centers for Disease Control and Prevention	SAMN04014944	GCA_001874795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/795/GCA_001874795.1_ASM187479v1	-	AR_0103
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.78251	39	-	LLHC01	251	3723	3509	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145721	GCA_001416015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/015/GCA_001416015.1_ASM141601v1	-	ABBL102
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.7058	57	-	MPWM03	128	5876	5621	12/14/16	5/6/17	Contig	JCVI	SAMN05956103	GCA_001903525.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/525/GCA_001903525.3_ASM190352v3	-	1285_2163
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.20202	64.1	-	FSNS01	49	5203	5055	12/14/16	3/21/17	Scaffold	SC	SAMEA2159516	GCA_900139865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/865/GCA_900139865.1_10660_1_29	-	723
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.83253	64.2	-	FVVE01	22	4777	4653	3/10/17	3/18/17	Scaffold	SC	SAMEA2147818	GCA_900139885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/885/GCA_900139885.1_10660_1_33	-	605
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.6594	57.1	-	MPXW03	120	5810	5550	12/14/16	5/6/17	Contig	JCVI	SAMN05956079	GCA_001903535.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/535/GCA_001903535.3_ASM190353v3	-	909_1860
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.14013	39.2	-	LLHF01	412	4044	3804	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145724	GCA_001416035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/035/GCA_001416035.1_ASM141603v1	-	ABBL106
Pseudomonas aeruginosa	287	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	6.96368	66	-	MPBS01	1	6641	6427	11/10/16	3/20/17	Contig	Centers for Disease Control and Prevention	SAMN04014933	GCA_001874805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/805/GCA_001874805.1_ASM187480v1	-	AR_0092
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.27503	39.6	-	CIML01	43	2480	2245	3/21/15	3/11/17	Contig	SC	SAMEA1025682	GCA_001139965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/965/GCA_001139965.1_6710_6_1	-	SMRU1345
Escherichia coli HVH 98 (4-5799287)	1281034	PRJNA186119	186119	Proteobacteria	Gammaproteobacteria	5.13383	50.5	-	AYHG01	19	5344	4984	10/29/13	2/22/17	Scaffold	Broad Institute	SAMN01885746	GCA_000488035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/035/GCA_000488035.1_Esch_coli_HVH_98_4-5799287_V1	-	HVH 98 (4-5799287)
Mycobacterium tuberculosis TB_RSA45	1421961	PRJNA228039	228039	Terrabacteria group	Actinobacteria	4.39925	65.6	-	JKVT01	5	4288	4111	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403486	GCA_000670735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/735/GCA_000670735.1_Myco_tube_TB_RSA45_V1	-	TB_RSA45
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.87381	37.9	-	MKNA01	11	2907	2817	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277761	GCA_001759885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/885/GCA_001759885.1_BCW_3836	-	NRRL B-33189
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.58785	52.1	-	CIRG01	42	4713	4368	3/21/15	2/27/17	Contig	SC	SAMEA2057118	GCA_001079345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/345/GCA_001079345.1_10071_3_74	-	A102
Staphylococcus aureus M1411	1398029	PRJNA218404	218404	Terrabacteria group	Firmicutes	2.8947	32.9	-	JCXX01	29	3047	2876	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350584	GCA_000548465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/465/GCA_000548465.1_Stap_aure_M1411_V1	-	M1411
Staphylococcus aureus M1412	1398030	PRJNA218405	218405	Terrabacteria group	Firmicutes	2.88147	32.9	-	JCXY01	43	3011	2859	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350585	GCA_000548485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/485/GCA_000548485.1_Stap_aure_M1412_V1	-	M1412
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.75836	52.1	-	CINH01	44	4924	4568	3/21/15	2/27/17	Contig	SC	SAMEA2056807	GCA_001079365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/365/GCA_001079365.1_10060_5_28	-	A237
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.90339	38	-	MKNB01	7	2921	2828	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277762	GCA_001759905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/905/GCA_001759905.1_BCW_3837	-	NRRL B-33190
Mycobacterium tuberculosis TB_RSA46	1421962	PRJNA228040	228040	Terrabacteria group	Actinobacteria	4.4107	65.5	-	JKVS01	14	4289	4103	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403487	GCA_000670755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/755/GCA_000670755.1_Myco_tube_TB_RSA46_V1	-	TB_RSA46
Escherichia coli UMEA 3336-1	1281243	PRJNA186346	186346	Proteobacteria	Gammaproteobacteria	4.82564	50.6	-	AYHH01	8	4916	4640	10/29/13	2/23/17	Scaffold	Broad Institute	SAMN01885955	GCA_000488055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/055/GCA_000488055.1_Esch_coli_UMEA_3336-1_V1	-	UMEA 3336-1
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.0746	39.7	-	CKBO01	161	2299	2083	3/21/15	3/11/17	Contig	SC	SAMEA974654	GCA_001139985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/985/GCA_001139985.1_6259_8_16	-	19F
Pseudomonas aeruginosa	287	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	6.92957	66	-	MPBQ01	12	6654	6379	11/10/16	3/20/17	Contig	Centers for Disease Control and Prevention	SAMN04014941	GCA_001874975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/975/GCA_001874975.1_ASM187497v1	-	AR_0100
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.82895	39.3	-	LLHT01	697	3765	3603	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145738	GCA_001416075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/075/GCA_001416075.1_ASM141607v1	-	ABBL123
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.66628	57.1	-	MPXF03	127	5803	5553	12/14/16	5/6/17	Contig	JCVI	SAMN05956122	GCA_001903555.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/555/GCA_001903555.3_ASM190355v3	-	1497_2419
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.88608	64.2	-	FVVG01	6	4840	4704	3/10/17	3/18/17	Scaffold	SC	SAMEA2150176	GCA_900139915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/915/GCA_900139915.1_10660_1_36	-	526
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.09931	64.1	-	FSNV01	15	5105	5004	12/14/16	3/21/17	Scaffold	SC	SAMEA2157297	GCA_900139935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/935/GCA_900139935.1_10660_1_37	-	667
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.53418	57.1	-	MPYI03	107	5639	5415	12/14/16	5/6/17	Contig	JCVI	SAMN05956091	GCA_001903605.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/605/GCA_001903605.3_ASM190360v3	-	1166_2049
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.01933	39.1	-	LLHU01	215	3949	3756	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145739	GCA_001416095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/095/GCA_001416095.1_ASM141609v1	-	ABBL124
Pseudomonas aeruginosa	287	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	6.42565	66.2	-	MPBO01	6	6098	5899	11/10/16	3/20/17	Contig	Centers for Disease Control and Prevention	SAMN04014946	GCA_001874995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/995/GCA_001874995.1_ASM187499v1	-	AR_0105
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11758	39.8	-	CKKN01	47	2307	2092	3/21/15	3/10/17	Contig	SC	SAMEA1023870	GCA_001140045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/045/GCA_001140045.1_6631_6_8	-	11A
Escherichia coli UMEA 3426-1	1281249	PRJNA186352	186352	Proteobacteria	Gammaproteobacteria	5.15622	50.4	-	AYHI01	12	5274	4920	10/29/13	2/23/17	Scaffold	Broad Institute	SAMN01885961	GCA_000488075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/075/GCA_000488075.1_Esch_coli_UMEA_3426-1_V1	-	UMEA 3426-1
Mycobacterium tuberculosis TB_RSA48	1421964	PRJNA228042	228042	Terrabacteria group	Actinobacteria	4.40965	65.5	-	JKVR01	9	4288	4103	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403489	GCA_000670775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/775/GCA_000670775.1_Myco_tube_TB_RSA48_V1	-	TB_RSA48
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.84617	38.2	-	MKNC01	10	2870	2774	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277763	GCA_001759915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/915/GCA_001759915.1_BCW_3838	-	NRRL B-33191
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93147	51.8	-	CIUH01	58	5118	4743	3/21/15	2/27/17	Contig	SC	SAMEA2064352	GCA_001079425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/425/GCA_001079425.1_10071_8_90	-	2010K-0544
Staphylococcus aureus M1413	1398031	PRJNA218406	218406	Terrabacteria group	Firmicutes	2.85644	32.9	-	JCXZ01	50	3003	2828	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350586	GCA_000548505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/505/GCA_000548505.1_Stap_aure_M1413_V1	-	M1413
Staphylococcus aureus M1414	1398032	PRJNA218407	218407	Terrabacteria group	Firmicutes	2.84723	33	-	JCYA01	22	2964	2797	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350587	GCA_000548525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/525/GCA_000548525.1_Stap_aure_M1414_V1	-	M1414
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.76894	52.1	-	CIPI01	46	4941	4583	3/21/15	2/27/17	Contig	SC	SAMEA2056711	GCA_001079445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/445/GCA_001079445.1_10060_6_63	-	UX305
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.89416	38	-	MKND01	19	2914	2829	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277764	GCA_001759945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/945/GCA_001759945.1_BCW_3839	-	NRRL B-33221
Mycobacterium tuberculosis TB_RSA49	1421965	PRJNA228043	228043	Terrabacteria group	Actinobacteria	4.43032	65.5	-	JKVQ01	24	4298	4113	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403490	GCA_000670795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/795/GCA_000670795.1_Myco_tube_TB_RSA49_V1	-	TB_RSA49
Escherichia coli UMEA 3290-1	1281234	PRJNA186337	186337	Proteobacteria	Gammaproteobacteria	5.07592	50.5	-	AYHJ01	7	5125	4805	10/29/13	2/23/17	Scaffold	Broad Institute	SAMN01885946	GCA_000488095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/095/GCA_000488095.1_Esch_coli_UMEA_3290-1_V1	-	UMEA 3290-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.10029	39.6	-	CNPC02	252	2256	2050	3/22/15	3/11/17	Contig	SC	SAMEA1032535	GCA_001140105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/105/GCA_001140105.2_6930_8_20	-	R34-3026
Pseudomonas aeruginosa	287	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	7.26771	65.8	-	MPBV01	9	7062	6796	11/10/16	3/20/17	Contig	Centers for Disease Control and Prevention	SAMN04014895	GCA_001875165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/165/GCA_001875165.1_ASM187516v1	-	AR_0054
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.80267	39.1	-	LLHV01	523	3849	3458	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145740	GCA_001416115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/115/GCA_001416115.1_ASM141611v1	-	ABBL125
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.5772	57.2	-	MPYH03	96	5620	5362	12/14/16	5/6/17	Contig	JCVI	SAMN05956090	GCA_001903615.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/615/GCA_001903615.3_ASM190361v3	-	1165_2048
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.36286	64.1	-	FSNW01	42	5451	5292	12/14/16	3/21/17	Scaffold	SC	SAMEA2153017	GCA_900139955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/955/GCA_900139955.1_10660_1_38	-	626
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.63473	64	-	FSNY01	36	5812	5631	12/14/16	3/21/17	Scaffold	SC	SAMEA2151080	GCA_900139975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/975/GCA_900139975.1_10660_1_48	-	668
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.52285	57.3	-	MPYR03	121	5618	5376	12/14/16	5/6/17	Contig	JCVI	SAMN05956139	GCA_001903675.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/675/GCA_001903675.3_ASM190367v3	-	2060_3082
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.01087	38.9	-	LLIB01	459	3922	3736	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145746	GCA_001416145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/145/GCA_001416145.1_ASM141614v1	-	ABBL131
Pseudomonas aeruginosa	287	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	6.82714	66	-	MPBU01	16	6520	6265	11/10/16	3/20/17	Contig	Centers for Disease Control and Prevention	SAMN04014905	GCA_001875185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/185/GCA_001875185.1_ASM187518v1	-	AR_0064
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.13299	39.7	-	CMFJ01	53	2314	2058	3/21/15	3/10/17	Contig	SC	SAMEA1028862	GCA_001140165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/165/GCA_001140165.1_7011_6_16	-	SMRU2824
Escherichia coli UMEA 3693-1	1281263	PRJNA186366	186366	Proteobacteria	Gammaproteobacteria	5.43106	50.6	-	AYHK01	17	5504	5145	10/29/13	2/23/17	Scaffold	Broad Institute	SAMN01885975	GCA_000488115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/115/GCA_000488115.1_Esch_coli_UMEA_3693-1_V1	-	UMEA 3693-1
Mycobacterium tuberculosis TB_RSA50	1421966	PRJNA228044	228044	Terrabacteria group	Actinobacteria	4.40302	65.5	-	JKVP01	5	4283	4092	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403491	GCA_000670815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/815/GCA_000670815.1_Myco_tube_TB_RSA50_V1	-	TB_RSA50
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.98005	37.9	-	MKNE01	24	3024	2943	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277765	GCA_001759965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/965/GCA_001759965.1_BCW_3840	-	NRRL B-33228
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74117	52.1	-	CIOR01	45	4926	4575	3/21/15	2/27/17	Contig	SC	SAMEA2055253	GCA_001079485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/485/GCA_001079485.1_10060_6_29	-	UI14191/3
Staphylococcus aureus M1415	1398033	PRJNA218409	218409	Terrabacteria group	Firmicutes	2.859	32.9	-	JCYB01	34	3011	2843	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350588	GCA_000548545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/545/GCA_000548545.1_Stap_aure_M1415_V1	-	M1415
Staphylococcus aureus M1416	1398034	PRJNA218410	218410	Terrabacteria group	Firmicutes	2.86145	32.8	-	JCYC01	59	3037	2848	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350589	GCA_000548565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/565/GCA_000548565.1_Stap_aure_M1416_V1	-	M1416
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.67983	52.1	-	CINM01	45	4825	4470	3/21/15	2/27/17	Contig	SC	SAMEA2055788	GCA_001079505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/505/GCA_001079505.1_10060_5_17	-	A158
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.8523	38.1	-	MKNF01	12	2855	2782	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277766	GCA_001759985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/985/GCA_001759985.1_BCW_3841	-	NRRL B-33229
Mycobacterium tuberculosis TB_RSA51	1421967	PRJNA228045	228045	Terrabacteria group	Actinobacteria	4.39635	65.5	-	JKVO01	7	4289	4105	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403492	GCA_000670835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/835/GCA_000670835.1_Myco_tube_TB_RSA51_V1	-	TB_RSA51
Escherichia coli UMEA 3323-1	1281241	PRJNA186344	186344	Proteobacteria	Gammaproteobacteria	5.64872	50.6	-	AYHL01	19	5815	5384	10/29/13	2/23/17	Scaffold	Broad Institute	SAMN01885953	GCA_000488135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/135/GCA_000488135.1_Esch_coli_UMEA_3323-1_V1	-	UMEA 3323-1
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.04649	39.7	-	CRGM01	62	2246	2036	3/23/15	3/11/17	Contig	SC	SAMEA1025138	GCA_001140225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/225/GCA_001140225.1_6736_6_10	-	SMRU1258
Pseudomonas aeruginosa	287	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	6.88258	66.1	-	MPBR01	5	6526	6315	11/10/16	3/20/17	Contig	Centers for Disease Control and Prevention	SAMN04014935	GCA_001875205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/205/GCA_001875205.1_ASM187520v1	-	AR_0094
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.00543	38.9	-	LLIC01	454	3911	3730	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145747	GCA_001416155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/155/GCA_001416155.1_ASM141615v1	-	ABBL132
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.6526	57.1	-	MPYL03	73	5694	5466	12/14/16	5/6/17	Contig	JCVI	SAMN05956152	GCA_001903685.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/685/GCA_001903685.3_ASM190368v3	-	1699_2677
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.78334	64.3	-	FVVK01	6	4730	4634	3/10/17	3/18/17	Scaffold	SC	SAMEA2154544	GCA_900140005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/005/GCA_900140005.1_10660_1_53	-	539
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.77581	64	-	FSOB01	42	5980	5791	12/14/16	3/21/17	Scaffold	SC	SAMEA2156539	GCA_900140015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/015/GCA_900140015.1_10660_1_5	-	670
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.57264	57.2	-	MPXU03	90	5616	5367	12/14/16	5/6/17	Contig	JCVI	SAMN05956077	GCA_001903695.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/695/GCA_001903695.3_ASM190369v3	-	804_1777
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.07646	38.9	-	LLIE01	439	3980	3779	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145749	GCA_001416165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/165/GCA_001416165.1_ASM141616v1	-	ABBL134
Pseudomonas aeruginosa	287	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	6.97112	66	-	MPBN01	3	6635	6428	11/10/16	3/20/17	Contig	Centers for Disease Control and Prevention	SAMN04014949	GCA_001875215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/215/GCA_001875215.1_ASM187521v1	-	AR_0108
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.10369	39.5	-	CPPT01	109	2284	2059	3/23/15	3/11/17	Contig	SC	SAMEA1020097	GCA_001140245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/245/GCA_001140245.1_6187_5_15	-	LMG759
Escherichia coli UMEA 3342-1	1281246	PRJNA186349	186349	Proteobacteria	Gammaproteobacteria	5.18045	50.5	-	AYHM01	13	5306	4971	10/29/13	2/23/17	Scaffold	Broad Institute	SAMN01885958	GCA_000488155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/155/GCA_000488155.1_Esch_coli_UMEA_3342-1_V1	-	UMEA 3342-1
Mycobacterium tuberculosis TB_RSA53	1421969	PRJNA228047	228047	Terrabacteria group	Actinobacteria	4.40192	65.6	-	JKVM01	7	4283	4118	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403494	GCA_000670855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/855/GCA_000670855.1_Myco_tube_TB_RSA53_V1	-	TB_RSA53
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.83558	38.1	-	MKNG01	11	2845	2774	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277767	GCA_001759995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/759/995/GCA_001759995.1_BCW_3842	-	NRRL B-33360
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73035	52	-	CIOP01	41	4884	4536	3/21/15	2/27/17	Contig	SC	SAMEA2059538	GCA_001079525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/525/GCA_001079525.1_10060_6_52	-	UI4940
Staphylococcus aureus M1417	1398035	PRJNA218411	218411	Terrabacteria group	Firmicutes	2.90126	32.9	-	JCYD01	30	3061	2880	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350590	GCA_000548585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/585/GCA_000548585.1_Stap_aure_M1417_V1	-	M1417
Staphylococcus aureus M1420	1398037	PRJNA218413	218413	Terrabacteria group	Firmicutes	2.83985	32.8	-	JCYE01	47	2990	2811	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350592	GCA_000548605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/605/GCA_000548605.1_Stap_aure_M1420_V1	-	M1420
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71892	52	-	CIUI01	40	4871	4525	3/21/15	2/27/17	Contig	SC	SAMEA2064024	GCA_001079545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/545/GCA_001079545.1_10071_8_9	-	Gen-0009
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.87026	38.1	-	MKNH01	14	2884	2807	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277678	GCA_001760025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/025/GCA_001760025.1_BCW_3843	-	NRRL B-33363
Mycobacterium tuberculosis TB_RSA55	1421971	PRJNA228049	228049	Terrabacteria group	Actinobacteria	4.40016	65.6	-	JKVK01	8	4293	4110	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403496	GCA_000670875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/875/GCA_000670875.1_Myco_tube_TB_RSA55_V1	-	TB_RSA55
Escherichia coli 113302	1268977	PRJNA183800	183800	Proteobacteria	Gammaproteobacteria	4.91612	50.8	-	AXTB01	196	5121	4770	10/25/13	2/22/17	Scaffold	Washington University	SAMN02436730	GCA_000488295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/295/GCA_000488295.1_ASM48829v1	-	113302
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00086	39.7	-	COCQ02	117	2156	1951	3/22/15	3/11/17	Contig	SC	SAMEA1463273	GCA_001140365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/365/GCA_001140365.2_7622_3_75	-	CH2123
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.60478	66.4	-	MPUW01	244	6330	5973	12/20/16	3/21/17	Contig	JCVI	SAMN05774252	GCA_001909445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/445/GCA_001909445.1_ASM190944v1	-	515477
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.94673	39.2	-	LLIG01	511	3882	3694	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145751	GCA_001416225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/225/GCA_001416225.1_ASM141622v1	-	ABBL137
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.80007	56.9	-	MPZJ03	156	5943	5698	12/14/16	5/6/17	Contig	JCVI	SAMN05956131	GCA_001903735.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/735/GCA_001903735.3_ASM190373v3	-	1560_2497
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.12698	64.1	-	FSOA01	17	5159	5049	12/14/16	3/21/17	Scaffold	SC	SAMEA2149005	GCA_900140025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/025/GCA_900140025.1_10660_1_52	-	710
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.09779	64.1	-	FVVL01	14	5100	5000	3/10/17	3/18/17	Scaffold	SC	SAMEA2154147	GCA_900140045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/045/GCA_900140045.1_10660_1_6	-	583
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.65467	57.1	-	MPXO03	116	5778	5550	12/14/16	5/6/17	Contig	JCVI	SAMN05956071	GCA_001903755.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/755/GCA_001903755.3_ASM190375v3	-	701_1645
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.90262	39	-	LLIH01	497	3774	3554	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145752	GCA_001416235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/235/GCA_001416235.1_ASM141623v1	-	ABBL138
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.42446	66.5	-	MPVB01	124	6155	5976	12/20/16	3/21/17	Contig	JCVI	SAMN05774257	GCA_001909455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/455/GCA_001909455.1_ASM190945v1	-	584004
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10331	39.7	-	CLKB01	72	2261	2024	3/21/15	3/11/17	Contig	SC	SAMEA1029168	GCA_001140385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/385/GCA_001140385.1_6925_8_4	-	SMRU2524
Escherichia coli 907391	1268980	PRJNA183803	183803	Proteobacteria	Gammaproteobacteria	5.07791	50.4	-	AXTC01	114	5247	4911	10/25/13	2/23/17	Scaffold	Washington University	SAMN02436739	GCA_000488315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/315/GCA_000488315.1_ASM48831v1	-	907391
Mycobacterium tuberculosis TB_RSA56	1421972	PRJNA228050	228050	Terrabacteria group	Actinobacteria	4.40253	65.5	-	JKVJ01	7	4288	4113	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403497	GCA_000670895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/895/GCA_000670895.1_Myco_tube_TB_RSA56_V1	-	TB_RSA56
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.91813	38	-	MKNI01	9	2965	2880	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277681	GCA_001760045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/045/GCA_001760045.1_BCW_3844	-	NRRL B-33364
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71937	52	-	CISL01	41	4863	4516	3/21/15	2/27/17	Contig	SC	SAMEA2066182	GCA_001079565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/565/GCA_001079565.1_10071_8_31	-	Gen-0031
Staphylococcus aureus M1421	1398038	PRJNA218414	218414	Terrabacteria group	Firmicutes	2.86098	32.8	-	JCYF01	38	2987	2854	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350593	GCA_000548625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/625/GCA_000548625.1_Stap_aure_M1421_V1	-	M1421
Staphylococcus aureus M1422	1398039	PRJNA218415	218415	Terrabacteria group	Firmicutes	2.8814	32.8	-	JCYG01	62	3042	2864	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350594	GCA_000548645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/645/GCA_000548645.1_Stap_aure_M1422_V1	-	M1422
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71984	52	-	CIRW01	44	4875	4525	3/21/15	2/27/17	Contig	SC	SAMEA2066179	GCA_001079585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/585/GCA_001079585.1_10071_8_22	-	Gen-0022
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.87502	38	-	MKNJ01	9	2875	2800	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277682	GCA_001760065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/065/GCA_001760065.1_BCW_3845	-	NRRL B-33365
Mycobacterium tuberculosis TB_RSA57	1421973	PRJNA228051	228051	Terrabacteria group	Actinobacteria	4.51408	65.5	-	JKVI01	13	4380	4206	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403498	GCA_000670915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/915/GCA_000670915.1_Myco_tube_TB_RSA57_V1	-	TB_RSA57
Escherichia coli 907446	1268981	PRJNA183804	183804	Proteobacteria	Gammaproteobacteria	5.04912	50.7	-	AXTD01	158	5294	4955	10/25/13	2/22/17	Scaffold	Washington University	SAMN02436876	GCA_000488335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/335/GCA_000488335.1_ASM48833v1	-	907446
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.18197	39.6	-	CKCI01	53	2414	2145	3/21/15	3/15/17	Contig	SC	SAMEA1024074	GCA_001140445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/445/GCA_001140445.1_6593_4_20	-	type strain: N
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	7.08768	65.7	-	MPVG01	185	6867	6615	12/20/16	3/21/17	Contig	JCVI	SAMN05774262	GCA_001909485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/485/GCA_001909485.1_ASM190948v1	-	CLB24232
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.90349	39.1	-	LLII01	650	3789	3547	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145753	GCA_001416255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/255/GCA_001416255.1_ASM141625v1	-	ABBL140
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.67059	57.1	-	MPXR03	123	5815	5556	12/14/16	5/6/17	Contig	JCVI	SAMN05956074	GCA_001903775.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/775/GCA_001903775.3_ASM190377v3	-	729_1679
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.27464	64.1	-	FSOD01	39	5347	5161	12/14/16	3/21/17	Scaffold	SC	SAMEA2156536	GCA_900140065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/065/GCA_900140065.1_10660_1_8	-	686
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.90434	64.2	-	FVVQ01	20	4903	4775	3/10/17	3/18/17	Scaffold	SC	SAMEA2150063	GCA_900140085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/085/GCA_900140085.1_10665_2_66	-	520
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.58588	57.1	-	MPZE03	119	5715	5476	12/14/16	5/6/17	Contig	JCVI	SAMN05956126	GCA_001903785.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/785/GCA_001903785.3_ASM190378v3	-	1524_2455
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.24946	39.1	-	LLIJ01	408	4245	4012	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145754	GCA_001416275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/275/GCA_001416275.1_ASM141627v1	-	ABBL141
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.93019	66	-	MPVA01	228	6783	6516	12/20/16	3/21/17	Contig	JCVI	SAMN05774256	GCA_001909495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/495/GCA_001909495.1_ASM190949v1	-	560747
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.06658	39.6	-	CKQC01	38	2246	2000	3/21/15	3/6/17	Contig	SC	SAMEA1024603	GCA_001140505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/505/GCA_001140505.1_6680_5_9	-	SMRU921
Escherichia coli 907672	1268982	PRJNA183805	183805	Proteobacteria	Gammaproteobacteria	4.93614	50.5	-	AXTE01	88	4976	4694	10/25/13	2/22/17	Scaffold	Washington University	SAMN02436740	GCA_000488355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/355/GCA_000488355.1_ASM48835v1	-	907672
Mycobacterium tuberculosis TB_RSA58	1421974	PRJNA228052	228052	Terrabacteria group	Actinobacteria	4.47812	65.6	-	JKVH01	11	4348	4178	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403499	GCA_000670935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/935/GCA_000670935.1_Myco_tube_TB_RSA58_V1	-	TB_RSA58
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.92763	38.1	-	MKNK01	13	2957	2886	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277684	GCA_001760075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/075/GCA_001760075.1_BCW_3846	-	NRRL B-33367
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93452	51.8	-	CINU01	56	5135	4750	3/21/15	2/27/17	Contig	SC	SAMEA2056669	GCA_001079605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/605/GCA_001079605.1_10060_5_4	-	2007-019648
Staphylococcus aureus M1423	1398040	PRJNA218416	218416	Terrabacteria group	Firmicutes	2.8891	32.8	-	JCYH01	47	3050	2873	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350595	GCA_000548665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/665/GCA_000548665.1_Stap_aure_M1423_V1	-	M1423
Staphylococcus aureus M1424	1398041	PRJNA218417	218417	Terrabacteria group	Firmicutes	2.85162	32.9	-	JCYI01	11	2996	2828	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350596	GCA_000548685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/685/GCA_000548685.1_Stap_aure_M1424_V1	-	M1424
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93264	51.8	-	CIUB01	57	5134	4756	3/21/15	2/27/17	Contig	SC	SAMEA2064349	GCA_001079665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/665/GCA_001079665.1_10071_8_81	-	2010K-0506
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.90548	38	-	MKNL01	12	2921	2843	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277695	GCA_001760105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/105/GCA_001760105.1_BCW_3847	-	NRRL B-33368
Mycobacterium tuberculosis TB_RSA59	1421975	PRJNA228053	228053	Terrabacteria group	Actinobacteria	4.42273	65.5	-	JKVG01	6	4299	4106	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403500	GCA_000670955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/955/GCA_000670955.1_Myco_tube_TB_RSA59_V1	-	TB_RSA59
Escherichia coli 907700	1268983	PRJNA183806	183806	Proteobacteria	Gammaproteobacteria	5.0379	50.6	-	AXTF01	127	5234	4913	10/25/13	2/22/17	Scaffold	Washington University	SAMN02436741	GCA_000488375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/375/GCA_000488375.1_ASM48837v1	-	907700
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.10801	39.6	-	COCJ02	186	2293	2074	3/23/15	3/11/17	Contig	SC	SAMEA1463222	GCA_001140525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/525/GCA_001140525.2_7622_3_68	-	CH2090
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.35411	66.4	-	MPUZ01	163	6108	5912	12/20/16	3/21/17	Contig	JCVI	SAMN05774255	GCA_001909585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/585/GCA_001909585.1_ASM190958v1	-	559543
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.93653	39.1	-	LLIL01	560	3898	3691	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145756	GCA_001416305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/305/GCA_001416305.1_ASM141630v1	-	ABBL143
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.39289	57.3	-	MPYO03	95	5510	5284	12/14/16	5/6/17	Contig	JCVI	SAMN05956136	GCA_001903795.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/795/GCA_001903795.3_ASM190379v3	-	1586_2523
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16638	64.1	-	FSOL01	44	5207	5081	12/14/16	3/21/17	Scaffold	SC	SAMEA2157651	GCA_900140265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/265/GCA_900140265.1_10665_2_93	-	687
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.07167	64.1	-	FSOK01	14	5073	4974	12/14/16	3/21/17	Scaffold	SC	SAMEA2163394	GCA_900140285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/285/GCA_900140285.1_10665_2_92	-	683
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.39601	57.4	-	MPXV03	74	5463	5247	12/14/16	5/6/17	Contig	JCVI	SAMN05956078	GCA_001903835.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/835/GCA_001903835.3_ASM190383v3	-	899_1848
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.73577	39.2	-	LLIN01	453	3567	3431	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145758	GCA_001416315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/315/GCA_001416315.1_ASM141631v1	-	ABBL147
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	7.01477	65.8	-	MPUY01	189	6803	6525	12/20/16	3/21/17	Contig	JCVI	SAMN05774254	GCA_001909605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/605/GCA_001909605.1_ASM190960v1	-	558344
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09836	39.6	-	COFM02	200	2257	2047	3/22/15	3/11/17	Contig	SC	SAMEA1463034	GCA_001140685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/685/GCA_001140685.2_7622_5_86	-	ND6052
Escherichia coli 907701	1268984	PRJNA183807	183807	Proteobacteria	Gammaproteobacteria	5.03082	50.8	-	AXTG01	149	5247	4916	10/25/13	2/22/17	Scaffold	Washington University	SAMN02436804	GCA_000488395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/395/GCA_000488395.1_ASM48839v1	-	907701
Mycobacterium tuberculosis TB_RSA60	1421976	PRJNA228054	228054	Terrabacteria group	Actinobacteria	4.41692	65.6	-	JKVF01	15	4296	4110	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403501	GCA_000670975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/975/GCA_000670975.1_Myco_tube_TB_RSA60_V1	-	TB_RSA60
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.87416	38.2	-	MKNM01	6	2881	2802	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277697	GCA_001760125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/125/GCA_001760125.1_BCW_3848	-	NRRL B-33370
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74371	52.1	-	CIQY01	43	4908	4544	3/21/15	2/27/17	Contig	SC	SAMEA2056203	GCA_001079785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/785/GCA_001079785.1_10071_3_60	-	648212
Staphylococcus aureus M1425	1398042	PRJNA218418	218418	Terrabacteria group	Firmicutes	2.87994	32.8	-	JCYJ01	43	3031	2862	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350597	GCA_000548705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/705/GCA_000548705.1_Stap_aure_M1425_V1	-	M1425
Staphylococcus aureus M1428	1398043	PRJNA218419	218419	Terrabacteria group	Firmicutes	2.89458	32.9	-	JCYK01	48	3048	2866	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350598	GCA_000548725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/725/GCA_000548725.1_Stap_aure_M1428_V1	-	M1428
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73196	52	-	CIOT01	40	4885	4532	3/21/15	2/27/17	Contig	SC	SAMEA1972846	GCA_001079805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/805/GCA_001079805.1_10060_6_34	-	UI17187
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.83874	38.2	-	MKNN01	7	2853	2757	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277705	GCA_001760145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/145/GCA_001760145.1_BCW_3849	-	NRRL B-33371
Mycobacterium tuberculosis TB_RSA61	1421977	PRJNA228055	228055	Terrabacteria group	Actinobacteria	4.42794	65.5	-	JKVE01	12	4307	4130	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403502	GCA_000670995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/670/995/GCA_000670995.1_Myco_tube_TB_RSA61_V1	-	TB_RSA61
Escherichia coli 907710	1268985	PRJNA183808	183808	Proteobacteria	Gammaproteobacteria	4.78086	50.7	-	AXTH01	125	4912	4605	10/25/13	2/22/17	Scaffold	Washington University	SAMN02436877	GCA_000488415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/415/GCA_000488415.1_ASM48841v1	-	907710
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08028	39.7	-	CQUU01	46	2301	2080	3/22/15	3/4/17	Contig	SC	SAMEA1025577	GCA_001140705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/705/GCA_001140705.1_6710_6_24	-	SMRU1368
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.42418	66	-	MPUS01	136	6160	5959	12/20/16	3/21/17	Contig	JCVI	SAMN05774248	GCA_001909615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/615/GCA_001909615.1_ASM190961v1	-	CCF_839
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.06521	38.9	-	LLIQ01	147	4000	3746	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145761	GCA_001416355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/355/GCA_001416355.1_ASM141635v1	-	ABOB01
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.55911	57.3	-	MPXT03	121	5702	5464	12/14/16	5/6/17	Contig	JCVI	SAMN05956076	GCA_001903845.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/845/GCA_001903845.3_ASM190384v3	-	776_1742
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15969	64.1	-	FVWB01	17	5262	5087	3/10/17	3/18/17	Scaffold	SC	SAMEA2151750	GCA_900140295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/295/GCA_900140295.1_10665_2_95	-	727
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15901	64.1	-	FVVZ01	11	5262	5090	3/10/17	3/18/17	Scaffold	SC	SAMEA1968959	GCA_900140305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/305/GCA_900140305.1_10665_2_94	-	726
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.77823	57	-	MPXP03	114	5969	5742	12/14/16	5/6/17	Contig	JCVI	SAMN05956072	GCA_001903865.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/865/GCA_001903865.3_ASM190386v3	-	703_1648
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.07157	39	-	LLIV01	500	3985	3748	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145766	GCA_001416385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/385/GCA_001416385.1_ASM141638v1	-	ABOB04_b
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.77943	66.2	-	MPUM01	163	6513	6273	12/20/16	3/21/17	Contig	JCVI	SAMN05774242	GCA_001909645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/645/GCA_001909645.1_ASM190964v1	-	CCF_715
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09278	39.6	-	COFO02	165	2266	2057	3/22/15	3/11/17	Contig	SC	SAMEA1463041	GCA_001140805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/805/GCA_001140805.2_7622_5_87	-	ND6053
Escherichia coli 907715	1268987	PRJNA183810	183810	Proteobacteria	Gammaproteobacteria	5.20186	50.7	-	AXTI01	182	5397	5062	10/25/13	2/22/17	Scaffold	Washington University	SAMN02436805	GCA_000488435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/435/GCA_000488435.1_ASM48843v1	-	907715
Mycobacterium tuberculosis TB_RSA62	1421978	PRJNA228056	228056	Terrabacteria group	Actinobacteria	4.42011	65.6	-	JKVD01	7	4302	4127	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403503	GCA_000671015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/015/GCA_000671015.1_Myco_tube_TB_RSA62_V1	-	TB_RSA62
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.86045	38.1	-	MKNO01	15	2881	2802	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277706	GCA_001760155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/155/GCA_001760155.1_BCW_3850	-	NRRL B-33372
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72157	52	-	CINV01	42	4886	4526	3/21/15	2/27/17	Contig	SC	SAMEA2058817	GCA_001079865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/865/GCA_001079865.1_10060_5_84	-	P749
Staphylococcus aureus M1429	1398044	PRJNA218420	218420	Terrabacteria group	Firmicutes	2.85667	32.9	-	JCYL01	18	2998	2830	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350599	GCA_000548745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/745/GCA_000548745.1_Stap_aure_M1429_V1	-	M1429
Staphylococcus aureus M1430	1398045	PRJNA218421	218421	Terrabacteria group	Firmicutes	2.87258	32.9	-	JCYM01	42	3045	2870	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350600	GCA_000548765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/765/GCA_000548765.1_Stap_aure_M1430_V1	-	M1430
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82823	52	-	CITA01	42	5020	4659	3/21/15	2/27/17	Contig	SC	SAMEA2067638	GCA_001079905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/905/GCA_001079905.1_10071_8_47	-	Gen-0047
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.90998	38.1	-	MKNP01	11	2962	2874	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277708	GCA_001760175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/175/GCA_001760175.1_BCW_3851	-	NRRL B-33373
Mycobacterium tuberculosis TB_RSA63	1421979	PRJNA228057	228057	Terrabacteria group	Actinobacteria	4.4056	65.6	-	JKVC01	4	4282	4109	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403504	GCA_000671035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/035/GCA_000671035.1_Myco_tube_TB_RSA63_V1	-	TB_RSA63
Escherichia coli 907889	1268989	PRJNA183812	183812	Proteobacteria	Gammaproteobacteria	5.3219	50.5	-	AXTJ01	273	5562	5147	10/25/13	2/22/17	Scaffold	Washington University	SAMN02436742	GCA_000488455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/455/GCA_000488455.1_ASM48845v1	-	907889
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.10986	39.5	-	CMND01	54	2322	2076	3/23/15	3/4/17	Contig	SC	SAMEA1029194	GCA_001140825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/825/GCA_001140825.1_7092_6_23	-	SMRU3119
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.76455	66.1	-	MPUX01	157	6494	6285	12/20/16	3/21/17	Contig	JCVI	SAMN05774253	GCA_001909655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/655/GCA_001909655.1_ASM190965v1	-	549782
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.93489	39.2	-	LLIX01	732	3860	3620	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145768	GCA_001416395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/395/GCA_001416395.1_ASM141639v1	-	ABOB06_a
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.5245	57.3	-	MPYP03	116	5621	5377	12/14/16	5/6/17	Contig	JCVI	SAMN05956137	GCA_001903875.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/875/GCA_001903875.3_ASM190387v3	-	2019_3069
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.12871	64.1	-	FVWI01	18	5164	5052	3/10/17	3/18/17	Scaffold	SC	SAMEA2142728	GCA_900140425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/425/GCA_900140425.1_10702_1_10	-	577
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.64282	64.3	-	FVWJ01	18	4606	4479	3/10/17	3/18/17	Scaffold	SC	SAMEA2143632	GCA_900140445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/445/GCA_900140445.1_10702_1_1	-	538
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.75531	57	-	MPYZ03	126	5864	5617	12/14/16	5/6/17	Contig	JCVI	SAMN05956147	GCA_001903915.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/915/GCA_001903915.3_ASM190391v3	-	2073_3097
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.01976	39	-	LLIZ01	499	3940	3713	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145770	GCA_001416415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/415/GCA_001416415.1_ASM141641v1	-	ABOB08
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	7.10067	65.9	-	MPVK01	223	6898	6657	12/20/16	3/21/17	Contig	JCVI	SAMN05774266	GCA_001909675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/675/GCA_001909675.1_ASM190967v1	-	CLB24983
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.19137	39.5	-	CKOK01	50	2426	2204	3/21/15	3/4/17	Contig	SC	SAMEA1023774	GCA_001140965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/965/GCA_001140965.1_6673_8_6	-	SMRU246
Escherichia coli 907892	1268990	PRJNA183813	183813	Proteobacteria	Gammaproteobacteria	5.17698	50.4	-	AXTK01	174	5365	4968	10/25/13	2/23/17	Scaffold	Washington University	SAMN02436806	GCA_000488475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/475/GCA_000488475.1_ASM48847v1	-	907892
Mycobacterium tuberculosis TB_RSA64	1421980	PRJNA228058	228058	Terrabacteria group	Actinobacteria	4.39856	65.6	-	JKVB01	1	4276	4113	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403505	GCA_000671055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/055/GCA_000671055.1_Myco_tube_TB_RSA64_V1	-	TB_RSA64
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.90738	38.1	-	MKNQ01	8	2928	2847	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277709	GCA_001760205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/205/GCA_001760205.1_BCW_3852	-	NRRL B-33374
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93369	51.8	-	CITX01	51	5130	4755	3/21/15	2/27/17	Contig	SC	SAMEA2067724	GCA_001079985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/985/GCA_001079985.1_10071_8_71	-	2010K-0550
Staphylococcus aureus M1431	1398046	PRJNA218422	218422	Terrabacteria group	Firmicutes	2.85053	32.8	-	JCYN01	24	2974	2848	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350601	GCA_000548785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/785/GCA_000548785.1_Stap_aure_M1431_V1	-	M1431
Staphylococcus aureus M1432	1398047	PRJNA218423	218423	Terrabacteria group	Firmicutes	2.86456	32.8	-	JCYO01	50	3029	2853	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350602	GCA_000548805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/805/GCA_000548805.1_Stap_aure_M1432_V1	-	M1432
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71941	52	-	CISH01	39	4872	4525	3/21/15	2/27/17	Contig	SC	SAMEA2066181	GCA_001080005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/005/GCA_001080005.1_10071_8_28	-	Gen-0028
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.85519	38.1	-	MKNR01	13	2837	2768	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277710	GCA_001760225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/225/GCA_001760225.1_BCW_3853	-	NRRL B-33375
Mycobacterium tuberculosis TB_RSA66	1421982	PRJNA228060	228060	Terrabacteria group	Actinobacteria	4.42418	65.5	-	JKVA01	8	4295	4126	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403507	GCA_000671075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/075/GCA_000671075.1_Myco_tube_TB_RSA66_V1	-	TB_RSA66
Escherichia coli 908519	1268991	PRJNA183814	183814	Proteobacteria	Gammaproteobacteria	5.25181	50.3	-	AXTL01	179	5517	5133	10/25/13	2/22/17	Scaffold	Washington University	SAMN02436868	GCA_000488495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/495/GCA_000488495.1_ASM48849v1	-	908519
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.16291	39.6	-	CMHR01	35	2357	2101	3/23/15	3/10/17	Contig	SC	SAMEA1029201	GCA_001141005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/005/GCA_001141005.1_7038_6_12	-	SMRU2988
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.60326	66.1	-	MPVE01	177	6341	6101	12/20/16	3/21/17	Contig	JCVI	SAMN05774260	GCA_001909775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/775/GCA_001909775.1_ASM190977v1	-	CL232
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.97414	39.1	-	LLJB01	540	3868	3643	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145772	GCA_001416425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/425/GCA_001416425.1_ASM141642v1	-	ABOB10
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.4913	57.2	-	MPYN03	117	5609	5377	12/14/16	5/6/17	Contig	JCVI	SAMN05956135	GCA_001903925.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/925/GCA_001903925.3_ASM190392v3	-	1583_2520
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.12699	64.2	-	FVWQ01	34	5160	5016	3/10/17	3/18/17	Scaffold	SC	SAMEA2143970	GCA_900140455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/455/GCA_900140455.1_10702_1_15	-	584
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.14653	64.2	-	FVWL01	30	5152	5017	3/10/17	3/18/17	Scaffold	SC	SAMEA2143474	GCA_900140465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/465/GCA_900140465.1_10702_1_11	-	578
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.60134	57.1	-	MPZC03	105	5686	5460	12/14/16	5/6/17	Contig	JCVI	SAMN05956150	GCA_001903935.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/935/GCA_001903935.3_ASM190393v3	-	2029_3040
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.96885	39.2	-	LLJC01	448	3901	3708	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145773	GCA_001416465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/465/GCA_001416465.1_ASM141646v1	-	ABOB11
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.6298	65.9	-	MPUR01	157	6409	6180	12/20/16	3/21/17	Contig	JCVI	SAMN05774247	GCA_001909795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/795/GCA_001909795.1_ASM190979v1	-	CCF_835
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.0919	39.7	-	CKPC01	59	2308	2091	3/21/15	3/10/17	Contig	SC	SAMEA1024924	GCA_001141285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/285/GCA_001141285.1_6680_4_5	-	19F
Escherichia coli 908521	1268992	PRJNA183815	183815	Proteobacteria	Gammaproteobacteria	5.16038	50.7	-	AXTM01	167	5392	5095	10/25/13	2/22/17	Scaffold	Washington University	SAMN02436807	GCA_000488515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/515/GCA_000488515.1_ASM48851v1	-	908521
Mycobacterium tuberculosis TB_RSA67	1421983	PRJNA228061	228061	Terrabacteria group	Actinobacteria	4.39921	65.6	-	JKUZ01	6	4287	4111	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403508	GCA_000671095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/095/GCA_000671095.1_Myco_tube_TB_RSA67_V1	-	TB_RSA67
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.85897	38.1	-	MKNS01	13	2830	2763	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277711	GCA_001760235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/235/GCA_001760235.1_BCW_3854	-	NRRL B-33376
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73956	52.1	-	CIQB01	51	4908	4561	3/21/15	2/27/17	Contig	SC	SAMEA2056050	GCA_001080025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/025/GCA_001080025.1_10071_3_12	-	TY108
Staphylococcus aureus M1433	1398048	PRJNA218424	218424	Terrabacteria group	Firmicutes	2.86272	32.9	-	JCYP01	16	3000	2835	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350603	GCA_000548825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/825/GCA_000548825.1_Stap_aure_M1433_V1	-	M1433
Staphylococcus aureus M1434	1398049	PRJNA218425	218425	Terrabacteria group	Firmicutes	2.87616	32.9	-	JCYQ01	20	3006	2832	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350604	GCA_000548845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/845/GCA_000548845.1_Stap_aure_M1434_V1	-	M1434
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72046	52	-	CIRZ01	46	4889	4537	3/21/15	2/27/17	Contig	SC	SAMEA2064149	GCA_001080085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/085/GCA_001080085.1_10071_8_12	-	Gen-0012
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.884	38.2	-	MKNT01	7	2914	2816	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277712	GCA_001760265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/265/GCA_001760265.1_BCW_3855	-	NRRL B-33377
Mycobacterium tuberculosis TB_RSA68	1421984	PRJNA228062	228062	Terrabacteria group	Actinobacteria	4.42746	65.5	-	JKUY01	15	4296	4118	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403509	GCA_000671115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/115/GCA_000671115.1_Myco_tube_TB_RSA68_V1	-	TB_RSA68
Escherichia coli 908522	1268993	PRJNA183816	183816	Proteobacteria	Gammaproteobacteria	5.18716	50.6	-	AXTN01	165	5440	5144	10/25/13	2/23/17	Scaffold	Washington University	SAMN02436869	GCA_000488535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/535/GCA_000488535.1_ASM48853v1	-	908522
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.03383	39.7	-	CMNJ01	70	2239	2026	3/22/15	3/10/17	Contig	SC	SAMEA1029243	GCA_001141305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/305/GCA_001141305.1_7092_6_20	-	SMRU3116
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.73388	66.2	-	MPUU01	187	6410	6188	12/20/16	3/21/17	Contig	JCVI	SAMN05774250	GCA_001909825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/825/GCA_001909825.1_ASM190982v1	-	511653
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.02333	38.8	-	LLJE01	95	3863	3681	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145775	GCA_001416475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/475/GCA_001416475.1_ASM141647v1	-	ABOB15
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.64014	57.2	-	MPYF03	107	5737	5475	12/14/16	5/6/17	Contig	JCVI	SAMN05956088	GCA_001903975.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/975/GCA_001903975.3_ASM190397v3	-	1146_2028
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96618	64.1	-	FWDD01	13	4952	4830	3/16/17	3/24/17	Scaffold	SC	SAMEA2158058	GCA_900140475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/475/GCA_900140475.1_10702_1_13	-	580
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16512	64.3	-	FVWK01	26	5159	5015	3/10/17	3/18/17	Scaffold	SC	SAMEA2159726	GCA_900140485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/485/GCA_900140485.1_10702_1_12	-	579
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.49673	57.2	-	MPZL03	102	5621	5397	12/14/16	5/6/17	Contig	JCVI	SAMN05956133	GCA_001903995.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/995/GCA_001903995.3_ASM190399v3	-	1566_2504
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.87017	39.1	-	LLJF01	380	3753	3566	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145776	GCA_001416495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/495/GCA_001416495.1_ASM141649v1	-	ABOB16
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	7.09421	65.9	-	MPVJ01	203	6910	6628	12/20/16	3/21/17	Contig	JCVI	SAMN05774265	GCA_001909945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/945/GCA_001909945.1_ASM190994v1	-	CLB24412
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08963	39.7	-	CKSL01	65	2299	2094	3/21/15	3/10/17	Contig	SC	SAMEA1025721	GCA_001141365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/365/GCA_001141365.1_6823_1_15	-	SMRU1863
Escherichia coli 908524	1268994	PRJNA183817	183817	Proteobacteria	Gammaproteobacteria	4.99454	50.8	-	AXTO01	140	5194	4860	10/25/13	2/22/17	Scaffold	Washington University	SAMN02436731	GCA_000488555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/555/GCA_000488555.1_ASM48855v1	-	908524
Mycobacterium tuberculosis TB_RSA69	1421985	PRJNA228063	228063	Terrabacteria group	Actinobacteria	4.39278	65.6	-	JKUX01	5	4260	4109	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403510	GCA_000671135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/135/GCA_000671135.1_Myco_tube_TB_RSA69_V1	-	TB_RSA69
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.8404	38.1	-	MKNU01	16	2848	2773	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277714	GCA_001760285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/285/GCA_001760285.1_BCW_3856	-	NRRL B-33378
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71965	52	-	CISF01	42	4876	4520	3/21/15	2/27/17	Contig	SC	SAMEA2066180	GCA_001080105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/105/GCA_001080105.1_10071_8_25	-	Gen-0025
Staphylococcus aureus M1435	1398050	PRJNA218426	218426	Terrabacteria group	Firmicutes	2.83932	32.8	-	JCYR01	31	2971	2837	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350605	GCA_000548865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/865/GCA_000548865.1_Stap_aure_M1435_V1	-	M1435
Staphylococcus aureus M1436	1398051	PRJNA218427	218427	Terrabacteria group	Firmicutes	2.85851	32.7	-	JCYS01	78	3015	2869	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350606	GCA_000548885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/885/GCA_000548885.1_Stap_aure_M1436_V1	-	M1436
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71946	52	-	CISS01	41	4872	4524	3/21/15	2/27/17	Contig	SC	SAMEA2066185	GCA_001080125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/125/GCA_001080125.1_10071_8_40	-	Gen-0040
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.91876	37.9	-	MKNV01	12	2989	2899	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277715	GCA_001760305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/305/GCA_001760305.1_BCW_3857	-	NRRL B-33379
Mycobacterium tuberculosis TB_RSA70	1421986	PRJNA228064	228064	Terrabacteria group	Actinobacteria	4.41389	65.5	-	JKUW01	4	4267	4103	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403511	GCA_000671155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/155/GCA_000671155.1_Myco_tube_TB_RSA70_V1	-	TB_RSA70
Escherichia coli 908525	1268995	PRJNA183818	183818	Proteobacteria	Gammaproteobacteria	5.02081	50.4	-	AXTP01	203	5173	4705	10/25/13	2/22/17	Scaffold	Washington University	SAMN02436743	GCA_000488575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/575/GCA_000488575.1_ASM48857v1	-	908525
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09751	39.6	-	CLIC01	67	2303	2045	3/21/15	3/10/17	Contig	SC	SAMEA1025999	GCA_001141425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/425/GCA_001141425.1_6925_6_15	-	SMRU2199
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.88849	66	-	MPVD01	180	6642	6407	12/20/16	3/21/17	Contig	JCVI	SAMN05774259	GCA_001910045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/045/GCA_001910045.1_ASM191004v1	-	608748_668748
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.03273	38.9	-	LLHZ01	204	3941	3687	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145744	GCA_001416515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/515/GCA_001416515.1_ASM141651v1	-	ABBL129
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.71467	57.1	-	MPYV03	115	5822	5565	12/14/16	5/6/17	Contig	JCVI	SAMN05956143	GCA_001904005.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/005/GCA_001904005.3_ASM190400v3	-	2093_3123
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.97178	64.2	-	FVWR01	47	5018	4851	3/10/17	3/18/17	Scaffold	SC	SAMEA2163498	GCA_900140495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/495/GCA_900140495.1_10702_1_17	-	586
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18701	64.2	-	FSOS01	30	5187	5041	12/14/16	3/21/17	Scaffold	SC	SAMEA2148059	GCA_900140505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/505/GCA_900140505.1_10702_1_14	-	581
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.50904	57.3	-	MPYS03	75	5587	5341	12/14/16	5/6/17	Contig	JCVI	SAMN05956140	GCA_001904015.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/015/GCA_001904015.3_ASM190401v3	-	2065_3089
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.95005	39	-	LLIA01	397	3848	3609	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145745	GCA_001416545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/545/GCA_001416545.1_ASM141654v1	-	ABBL130
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.57734	66.2	-	MPUQ01	152	6234	6035	12/20/16	3/21/17	Contig	JCVI	SAMN05774246	GCA_001910055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/055/GCA_001910055.1_ASM191005v1	-	CCF_834
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	1.95683	39.8	-	CMVD01	32	2147	1915	3/22/15	3/10/17	Contig	SC	SAMEA1022846	GCA_001141465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/465/GCA_001141465.1_5750_2_2	-	233
Escherichia coli 908541	1268996	PRJNA183819	183819	Proteobacteria	Gammaproteobacteria	4.97582	50.7	-	AXTQ01	179	5206	4839	10/25/13	2/22/17	Scaffold	Washington University	SAMN02436870	GCA_000488595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/595/GCA_000488595.1_ASM48859v1	-	908541
Mycobacterium tuberculosis TB_RSA71	1421987	PRJNA228065	228065	Terrabacteria group	Actinobacteria	4.39995	65.6	-	JKUV01	10	4283	4107	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403512	GCA_000671175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/175/GCA_000671175.1_Myco_tube_TB_RSA71_V1	-	TB_RSA71
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.86478	38	-	MKNW01	15	2876	2797	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277716	GCA_001760315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/315/GCA_001760315.1_BCW_3858	-	NRRL B-33380
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70048	52.1	-	CIQL01	42	4865	4515	3/21/15	2/27/17	Contig	SC	SAMEA2056057	GCA_001080145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/145/GCA_001080145.1_10071_3_33	-	225555
Staphylococcus aureus M1437	1398052	PRJNA218428	218428	Terrabacteria group	Firmicutes	2.85955	32.9	-	JCYT01	15	2994	2832	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350607	GCA_000548905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/905/GCA_000548905.1_Stap_aure_M1437_V1	-	M1437
Staphylococcus aureus M1438	1398053	PRJNA218429	218429	Terrabacteria group	Firmicutes	2.85504	32.9	-	JCYU01	53	2994	2821	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350608	GCA_000548925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/925/GCA_000548925.1_Stap_aure_M1438_V1	-	M1438
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71033	52.1	-	CIOK01	42	4879	4529	3/21/15	2/27/17	Contig	SC	SAMEA2055250	GCA_001080165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/165/GCA_001080165.1_10060_6_20	-	UI10788
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.89745	38	-	MKNX01	12	2940	2842	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277717	GCA_001760345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/345/GCA_001760345.1_BCW_3859	-	NRRL B-33381
Mycobacterium tuberculosis TB_RSA72	1421988	PRJNA228066	228066	Terrabacteria group	Actinobacteria	4.41122	65.6	-	JKUU01	5	4283	4110	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403513	GCA_000671195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/195/GCA_000671195.1_Myco_tube_TB_RSA72_V1	-	TB_RSA72
Escherichia coli 908555	1268997	PRJNA183820	183820	Proteobacteria	Gammaproteobacteria	4.77605	50.6	-	AXTR01	114	4947	4631	10/25/13	2/22/17	Scaffold	Washington University	SAMN02436808	GCA_000488615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/615/GCA_000488615.1_ASM48861v1	-	908555
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06284	39.5	-	CNNJ02	132	2218	2025	3/23/15	3/11/17	Contig	SC	SAMEA1032580	GCA_001141485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/485/GCA_001141485.2_6925_1_59	-	R34-3040
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.89989	66.1	-	MPVI01	155	6725	6509	12/20/16	3/21/17	Contig	JCVI	SAMN05774264	GCA_001910105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/105/GCA_001910105.1_ASM191010v1	-	CLB24405
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.94985	39	-	LLID01	421	3890	3635	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145748	GCA_001416555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/555/GCA_001416555.1_ASM141655v1	-	ABBL133
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.47004	57.3	-	MPXS03	93	5586	5372	12/14/16	5/6/17	Contig	JCVI	SAMN05956075	GCA_001904045.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/045/GCA_001904045.3_ASM190404v3	-	761_1723
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.09866	64.1	-	FVWT01	18	5106	5000	3/10/17	3/18/17	Scaffold	SC	SAMEA2142635	GCA_900140515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/515/GCA_900140515.1_10702_1_18	-	587
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.0854	64.3	-	FSOT01	27	5119	4992	12/14/16	3/21/17	Scaffold	SC	SAMEA2161456	GCA_900140525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/525/GCA_900140525.1_10702_1_19	-	589
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.50952	57.3	-	MPYT03	76	5567	5328	12/14/16	5/6/17	Contig	JCVI	SAMN05956141	GCA_001904075.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/075/GCA_001904075.3_ASM190407v3	-	2066_3090
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.99069	38.9	-	LLIK01	296	3918	3713	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145755	GCA_001416565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/565/GCA_001416565.1_ASM141656v1	-	ABBL142
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.3105	66.5	-	MPVH01	142	5971	5794	12/20/16	3/21/17	Contig	JCVI	SAMN05774263	GCA_001910115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/115/GCA_001910115.1_ASM191011v1	-	CLB24402
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.13244	39.6	-	COBZ02	203	2333	2100	3/23/15	3/5/17	Contig	SC	SAMEA1463078	GCA_001141525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/525/GCA_001141525.2_7622_3_59	-	CH2067
Escherichia coli 908573	1268998	PRJNA183821	183821	Proteobacteria	Gammaproteobacteria	5.33926	50.4	-	AXTS01	222	5503	5114	10/25/13	2/22/17	Scaffold	Washington University	SAMN02436809	GCA_000488635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/635/GCA_000488635.1_ASM48863v1	-	908573
Mycobacterium tuberculosis TB_RSA73	1421989	PRJNA228067	228067	Terrabacteria group	Actinobacteria	4.41115	65.5	-	JKUT01	9	4285	4128	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403514	GCA_000671215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/215/GCA_000671215.1_Myco_tube_TB_RSA73_V1	-	TB_RSA73
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.84402	38.2	-	MKNY01	9	2832	2757	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277718	GCA_001760365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/365/GCA_001760365.1_BCW_3860	-	NRRL B-33382
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69751	52.1	-	CIPA01	43	4855	4509	3/21/15	2/27/17	Contig	SC	SAMEA2056705	GCA_001080205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/205/GCA_001080205.1_10060_6_42	-	UI3608
Staphylococcus aureus M1441	1398054	PRJNA218430	218430	Terrabacteria group	Firmicutes	2.92595	32.9	-	JCYV01	85	3100	2905	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350609	GCA_000548945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/945/GCA_000548945.1_Stap_aure_M1441_V1	-	M1441
Staphylococcus aureus M1443	1398055	PRJNA218431	218431	Terrabacteria group	Firmicutes	2.84408	32.8	-	JCYW01	44	3014	2846	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350610	GCA_000548965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/965/GCA_000548965.1_Stap_aure_M1443_V1	-	M1443
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71932	52	-	CIUA01	46	4874	4516	3/21/15	2/27/17	Contig	SC	SAMEA2067625	GCA_001080225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/225/GCA_001080225.1_10071_8_8	-	Gen-0008
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.8202	38.2	-	MKNZ01	15	2825	2732	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277719	GCA_001760385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/385/GCA_001760385.1_BCW_3861	-	NRRL B-33383
Mycobacterium tuberculosis TB_RSA74	1421990	PRJNA228068	228068	Terrabacteria group	Actinobacteria	4.41262	65.6	-	JKUS01	19	4284	4118	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403515	GCA_000671235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/235/GCA_000671235.1_Myco_tube_TB_RSA74_V1	-	TB_RSA74
Escherichia coli 908585	1268999	PRJNA183822	183822	Proteobacteria	Gammaproteobacteria	5.04956	50.6	-	AXTT01	185	5256	4938	10/25/13	2/22/17	Scaffold	Washington University	SAMN02436732	GCA_000488655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/655/GCA_000488655.1_ASM48865v1	-	908585
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.12846	39.7	-	CMVT01	87	2287	2013	3/22/15	3/10/17	Contig	SC	SAMEA1991274	GCA_001141605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/605/GCA_001141605.1_5756_5_8	-	272
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	7.06573	65.7	-	MPUN01	181	6825	6563	12/20/16	3/21/17	Contig	JCVI	SAMN05774243	GCA_001910215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/215/GCA_001910215.1_ASM191021v1	-	CCF_716
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.96404	39	-	LLIM01	442	3877	3643	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145757	GCA_001416585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/585/GCA_001416585.1_ASM141658v1	-	ABBL144
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.4606	57.3	-	MPYU03	112	5554	5323	12/14/16	5/6/17	Contig	JCVI	SAMN05956142	GCA_001904095.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/095/GCA_001904095.3_ASM190409v3	-	2063_3086
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.91158	64.1	-	FSOW01	1463	6071	5174	12/14/16	3/21/17	Scaffold	SC	SAMEA2156733	GCA_900140535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/535/GCA_900140535.1_10702_1_16	-	585
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.81873	64.1	-	FSOV01	10	4790	4670	12/14/16	3/21/17	Scaffold	SC	SAMEA2158095	GCA_900140545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/545/GCA_900140545.1_10702_1_20	-	591
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.89066	57	-	MPYW03	158	6020	5748	12/14/16	5/6/17	Contig	JCVI	SAMN05956144	GCA_001904105.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/105/GCA_001904105.3_ASM190410v3	-	2049_3065
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.81866	39	-	LLIP01	443	3673	3500	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145760	GCA_001416625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/625/GCA_001416625.1_ASM141662v1	-	ABBL149
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.23015	66.6	-	MPUL01	123	5883	5721	12/20/16	3/21/17	Contig	JCVI	SAMN05774241	GCA_001910265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/265/GCA_001910265.1_ASM191026v1	-	CCF_696
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.00781	39.8	-	CKZR01	57	2184	1986	3/21/15	3/11/17	Contig	SC	SAMEA1026241	GCA_001141765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/765/GCA_001141765.1_6840_3_10	-	SMRU1810
Escherichia coli 908616	1269000	PRJNA183823	183823	Proteobacteria	Gammaproteobacteria	5.27489	50.6	-	AXTU01	179	5513	5182	10/25/13	2/22/17	Scaffold	Washington University	SAMN02436871	GCA_000488675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/675/GCA_000488675.1_ASM48867v1	-	908616
Mycobacterium tuberculosis TB_RSA75	1421991	PRJNA228069	228069	Terrabacteria group	Actinobacteria	4.43901	65.5	-	JKUR01	19	4308	4117	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403516	GCA_000671255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/255/GCA_000671255.1_Myco_tube_TB_RSA75_V1	-	TB_RSA75
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.94305	37.9	-	MKOB01	39	2984	2903	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277768	GCA_001760415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/415/GCA_001760415.1_BCW_3863	-	NRRL B-33386
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73574	52.1	-	CIQU01	43	4896	4546	3/21/15	2/27/17	Contig	SC	SAMEA2056200	GCA_001080245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/245/GCA_001080245.1_10071_3_51	-	427489
Staphylococcus aureus M1444	1398056	PRJNA218432	218432	Terrabacteria group	Firmicutes	2.85905	32.9	-	JCYX01	50	2992	2817	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350611	GCA_000548985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/548/985/GCA_000548985.1_Stap_aure_M1444_V1	-	M1444
Staphylococcus aureus M1445	1398057	PRJNA218433	218433	Terrabacteria group	Firmicutes	2.88929	32.8	-	JCYY01	62	3069	2896	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350612	GCA_000549005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/005/GCA_000549005.1_Stap_aure_M1445_V1	-	M1445
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93205	51.8	-	CITZ01	47	5132	4748	3/21/15	2/27/17	Contig	SC	SAMEA2067725	GCA_001080285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/285/GCA_001080285.1_10071_8_74	-	2010K-0539
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.92673	37.8	-	MKOD01	19	2966	2880	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277625	GCA_001760465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/465/GCA_001760465.1_BCW_3865	-	NRRL B-33396
Mycobacterium tuberculosis TB_RSA76	1421992	PRJNA228070	228070	Terrabacteria group	Actinobacteria	4.45186	65.5	-	JKUQ01	8	4303	4095	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02403517	GCA_000671275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/275/GCA_000671275.1_Myco_tube_TB_RSA76_V1	-	TB_RSA76
Escherichia coli 908624	1269001	PRJNA183824	183824	Proteobacteria	Gammaproteobacteria	5.03633	50.7	-	AXTV01	154	5259	4907	10/25/13	2/22/17	Scaffold	Washington University	SAMN02436872	GCA_000488695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/695/GCA_000488695.1_ASM48869v1	-	908624
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06525	39.5	-	CNSE02	269	2188	1997	3/23/15	3/11/17	Contig	SC	SAMEA1032613	GCA_001141885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/885/GCA_001141885.2_6999_3_13	-	42861
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.56363	66.3	-	MPUP01	152	6217	6000	12/20/16	3/21/17	Contig	JCVI	SAMN05774245	GCA_001910285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/285/GCA_001910285.1_ASM191028v1	-	CCF_795
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.99775	39.1	-	LLIS01	431	3905	3672	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145763	GCA_001416635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/635/GCA_001416635.1_ASM141663v1	-	ABOB03
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.89472	57	-	MPYQ03	170	6031	5746	12/14/16	5/6/17	Contig	JCVI	SAMN05956138	GCA_001904115.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/115/GCA_001904115.3_ASM190411v3	-	2022_3032
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.83841	64.2	-	FVWN01	26	4801	4681	3/10/17	3/18/17	Scaffold	SC	SAMEA2151082	GCA_900140555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/555/GCA_900140555.1_10702_1_2	-	540
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.19711	64.1	-	FSOU01	39	5260	5097	12/14/16	3/21/17	Scaffold	SC	SAMEA2160300	GCA_900140565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/565/GCA_900140565.1_10702_1_21	-	594
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.54148	57.2	-	MPZD03	142	5721	5488	12/14/16	5/6/17	Contig	JCVI	SAMN05956125	GCA_001904155.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/155/GCA_001904155.3_ASM190415v3	-	1523_2454
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.98595	39	-	LLIT01	346	3894	3652	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145764	GCA_001416655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/655/GCA_001416655.1_ASM141665v1	-	ABOB04
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.66018	66.3	-	MPUO01	168	6374	6134	12/20/16	3/21/17	Contig	JCVI	SAMN05774244	GCA_001910305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/305/GCA_001910305.1_ASM191030v1	-	CCF_776
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05269	39.6	-	CNWV02	141	2200	1987	3/22/15	3/11/17	Contig	SC	SAMEA1032516	GCA_001141925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/925/GCA_001141925.2_7001_2_13	-	R34-3118
Escherichia coli 908632	1269002	PRJNA183825	183825	Proteobacteria	Gammaproteobacteria	5.04883	50.7	-	AXTW01	162	5253	4926	10/25/13	2/22/17	Scaffold	Washington University	SAMN02436733	GCA_000488715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/715/GCA_000488715.1_ASM48871v1	-	908632
Mycobacterium tuberculosis TKK_02_0001	1397853	PRJNA218225	218225	Terrabacteria group	Actinobacteria	4.41868	65.5	-	JLWC01	5	4299	4101	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350408	GCA_000671775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/775/GCA_000671775.1_Myco_tube_TKK_02_0001_V1	-	TKK_02_0001
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.94339	37.9	-	MKOE01	21	3003	2928	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277628	GCA_001760475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/475/GCA_001760475.1_BCW_3866	-	NRRL B-33398
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72596	52	-	CIOO01	51	4885	4523	3/21/15	2/27/17	Contig	SC	SAMEA2059533	GCA_001080325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/325/GCA_001080325.1_10060_6_28	-	UI13823
Staphylococcus aureus M1446	1398058	PRJNA218434	218434	Terrabacteria group	Firmicutes	2.88132	32.9	-	JCYZ01	49	3038	2864	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350613	GCA_000549025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/025/GCA_000549025.1_Stap_aure_M1446_V1	-	M1446
Staphylococcus aureus M1447	1398059	PRJNA218435	218435	Terrabacteria group	Firmicutes	2.86855	32.7	-	JCZA01	73	3006	2869	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350614	GCA_000549045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/045/GCA_000549045.1_Stap_aure_M1447_V1	-	M1447
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7397	52	-	CIOM01	46	4899	4542	3/21/15	2/27/17	Contig	SC	SAMEA1969027	GCA_001080385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/385/GCA_001080385.1_10060_6_37	-	UI3446
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.89643	37.8	-	MKOF01	12	2934	2853	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277627	GCA_001760495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/495/GCA_001760495.1_BCW_3867	-	NRRL B-33399
Mycobacterium tuberculosis TKK_02_0002	1397854	PRJNA218226	218226	Terrabacteria group	Actinobacteria	4.41643	65.5	-	JLWB01	4	4305	4102	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350409	GCA_000671795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/795/GCA_000671795.1_Myco_tube_TKK_02_0002_V1	-	TKK_02_0002
Escherichia coli 908658	1269003	PRJNA183826	183826	Proteobacteria	Gammaproteobacteria	4.97021	50.7	-	AXTX01	170	5158	4818	10/25/13	2/22/17	Scaffold	Washington University	SAMN02436873	GCA_000488735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/735/GCA_000488735.1_ASM48873v1	-	908658
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1088	39.6	-	CLCH01	63	2326	2094	3/21/15	3/4/17	Contig	SC	SAMEA1026215	GCA_001141965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/965/GCA_001141965.1_6871_2_3	-	SMRU1827
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.91971	66	-	MPVC01	266	6710	6418	12/20/16	3/21/17	Contig	JCVI	SAMN05774258	GCA_001910345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/345/GCA_001910345.1_ASM191034v1	-	520374_526374
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.0068	39	-	LLIW01	316	3892	3661	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145767	GCA_001416665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/665/GCA_001416665.1_ASM141666v1	-	ABOB06
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.52785	57.1	-	MPZG03	97	5653	5430	12/14/16	5/6/17	Contig	JCVI	SAMN05956128	GCA_001904165.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/165/GCA_001904165.3_ASM190416v3	-	1538_2467
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.07061	64	-	FVWP01	24	5127	4964	3/10/17	3/18/17	Scaffold	SC	SAMEA1973430	GCA_900140575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/575/GCA_900140575.1_10702_1_22	-	595
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.06438	64.1	-	FVWU01	14	5068	4925	3/10/17	3/18/17	Scaffold	SC	SAMEA2163444	GCA_900140585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/585/GCA_900140585.1_10702_1_25	-	598
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.55136	57.3	-	MPZH03	138	5698	5471	12/14/16	5/6/17	Contig	JCVI	SAMN05956129	GCA_001904175.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/175/GCA_001904175.3_ASM190417v3	-	1544_2474
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.92884	39.5	-	LLIY01	1368	3876	3608	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145769	GCA_001416705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/705/GCA_001416705.1_ASM141670v1	-	ABOB07
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.92721	66.1	-	MPVF01	192	6748	6509	12/20/16	3/21/17	Contig	JCVI	SAMN05774261	GCA_001910365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/365/GCA_001910365.1_ASM191036v1	-	CLB24226
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00166	39.7	-	CNZI02	208	2114	1953	3/23/15	3/11/17	Contig	SC	SAMEA1463294	GCA_001142005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/005/GCA_001142005.2_7553_5_63	-	PT8003
Escherichia coli 908675	1269004	PRJNA183827	183827	Proteobacteria	Gammaproteobacteria	5.0755	50.6	-	AXTY01	140	5280	4961	10/25/13	2/23/17	Scaffold	Washington University	SAMN02436874	GCA_000488755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/755/GCA_000488755.1_ASM48875v1	-	908675
Mycobacterium tuberculosis TKK_02_0003	1397855	PRJNA218227	218227	Terrabacteria group	Actinobacteria	4.41696	65.5	-	JLWA01	5	4303	4099	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350410	GCA_000671815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/815/GCA_000671815.1_Myco_tube_TKK_02_0003_V1	-	TKK_02_0003
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.89173	37.9	-	MKOG01	15	2924	2855	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277626	GCA_001760525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/525/GCA_001760525.1_BCW_3868	-	NRRL B-33400
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69778	52.1	-	CIPG01	51	4850	4504	3/21/15	2/27/17	Contig	SC	SAMEA2056709	GCA_001080405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/405/GCA_001080405.1_10060_6_57	-	UI5312
Staphylococcus aureus M1448	1398060	PRJNA218436	218436	Terrabacteria group	Firmicutes	2.84373	32.9	-	JCZB01	47	2980	2811	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350615	GCA_000549065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/065/GCA_000549065.1_Stap_aure_M1448_V1	-	M1448
Staphylococcus aureus M1449	1398061	PRJNA218437	218437	Terrabacteria group	Firmicutes	2.84084	32.8	-	JCZC01	36	2991	2830	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350616	GCA_000549085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/085/GCA_000549085.1_Stap_aure_M1449_V1	-	M1449
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82801	52	-	CISQ01	44	5015	4652	3/21/15	2/27/17	Contig	SC	SAMEA2066184	GCA_001080465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/465/GCA_001080465.1_10071_8_37	-	Gen-0037
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.95671	37.8	-	MKOH01	16	3014	2936	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277630	GCA_001760545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/545/GCA_001760545.1_BCW_3869	-	NRRL B-33402
Mycobacterium tuberculosis TKK_02_0006	1397856	PRJNA218228	218228	Terrabacteria group	Actinobacteria	4.40797	65.6	-	JLVZ01	2	4278	4108	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350411	GCA_000671835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/835/GCA_000671835.1_Myco_tube_TKK_02_0006_V1	-	TKK_02_0006
Escherichia coli 908691	1269005	PRJNA183828	183828	Proteobacteria	Gammaproteobacteria	5.11581	50.7	-	AXTZ01	144	5339	5017	10/25/13	2/22/17	Scaffold	Washington University	SAMN02436734	GCA_000488775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/775/GCA_000488775.1_ASM48877v1	-	908691
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10516	39.6	-	CLJS01	68	2349	2118	3/21/15	3/4/17	Contig	SC	SAMEA1029149	GCA_001142025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/025/GCA_001142025.1_6925_8_13	-	SMRU2533
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.85389	66	-	MPUV01	169	6564	6317	12/20/16	3/21/17	Contig	JCVI	SAMN05774251	GCA_001910375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/375/GCA_001910375.1_ASM191037v1	-	514747
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.96379	39.1	-	LLJA01	429	3851	3637	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145771	GCA_001416715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/416/715/GCA_001416715.1_ASM141671v1	-	ABOB09
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.67987	56.8	-	MPZI03	117	5786	5557	12/14/16	5/6/17	Contig	JCVI	SAMN05956130	GCA_001904205.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/205/GCA_001904205.3_ASM190420v3	-	1557_2494
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.07515	64.1	-	FVWV01	19	5079	4970	3/10/17	3/18/17	Scaffold	SC	SAMEA2160050	GCA_900140605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/605/GCA_900140605.1_10702_1_24	-	597
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.99096	64.2	-	FSOX01	11	4988	4894	12/14/16	3/21/17	Scaffold	SC	SAMEA2148323	GCA_900140615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/615/GCA_900140615.1_10702_1_26	-	600
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.3895	57.3	-	MPYM03	101	5499	5279	12/14/16	5/6/17	Contig	JCVI	SAMN05956134	GCA_001904235.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/235/GCA_001904235.3_ASM190423v3	-	1573_2510
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.99181	39.1	-	LLIU01	407	3891	3648	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145765	GCA_001417485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/485/GCA_001417485.1_ASM141748v1	-	ABOB04_a
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.89583	66	-	MPUT01	178	6606	6354	12/20/16	3/21/17	Contig	JCVI	SAMN05774249	GCA_001910425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/425/GCA_001910425.1_ASM191042v1	-	CCF_851
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08581	39.5	-	CNZS02	178	2262	2048	3/22/15	3/11/17	Contig	SC	SAMEA1463269	GCA_001142045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/045/GCA_001142045.2_7553_5_81	-	PT8054
Escherichia coli 910096-2	1269010	PRJNA183833	183833	Proteobacteria	Gammaproteobacteria	4.99742	50.7	-	AXUA01	164	5156	4770	10/25/13	2/23/17	Scaffold	Washington University	SAMN02436875	GCA_000488795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/795/GCA_000488795.1_ASM48879v1	-	910096-2
Mycobacterium tuberculosis TKK_02_0012	1397857	PRJNA218229	218229	Terrabacteria group	Actinobacteria	4.40671	65.6	-	JLVY01	1	4280	4117	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350412	GCA_000671855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/855/GCA_000671855.1_Myco_tube_TKK_02_0012_V1	-	TKK_02_0012
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.0812	37.8	-	MKOJ01	37	3151	3075	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277631	GCA_001760575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/575/GCA_001760575.1_BCW_3871	-	NRRL B-33419
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82601	52	-	CISC01	41	5007	4650	3/21/15	2/27/17	Contig	SC	SAMEA2067628	GCA_001080485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/485/GCA_001080485.1_10071_8_17	-	Gen-0017
Staphylococcus aureus M1452	1398062	PRJNA218438	218438	Terrabacteria group	Firmicutes	2.88756	32.8	-	JCZD01	52	3042	2883	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350617	GCA_000549105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/105/GCA_000549105.1_Stap_aure_M1452_V1	-	M1452
Staphylococcus aureus M1453	1398063	PRJNA218439	218439	Terrabacteria group	Firmicutes	2.88452	32.8	-	JCZE01	97	3065	2917	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350618	GCA_000549125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/125/GCA_000549125.1_Stap_aure_M1453_V1	-	M1453
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.698	52.1	-	CIQW01	45	4864	4500	3/21/15	2/27/17	Contig	SC	SAMEA1966509	GCA_001080525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/525/GCA_001080525.1_10071_3_53	-	410378
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.80315	38.1	-	MKOK01	22	2862	2777	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277769	GCA_001760605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/605/GCA_001760605.1_BCW_3872	-	NRRL B-33425
Mycobacterium tuberculosis TKK_02_0013	1397858	PRJNA218230	218230	Terrabacteria group	Actinobacteria	4.4019	65.6	-	JLVX01	1	4274	4112	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350413	GCA_000671875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/875/GCA_000671875.1_Myco_tube_TKK_02_0013_V1	-	TKK_02_0013
Escherichia coli A25922R	1269008	PRJNA183831	183831	Proteobacteria	Gammaproteobacteria	5.04176	50.4	-	AXUB01	145	5200	4870	10/25/13	2/23/17	Scaffold	Washington University	SAMN02436866	GCA_000488815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/815/GCA_000488815.1_ASM48881v1	-	A25922R
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	1.97869	39.7	-	CLHA01	51	2172	1976	3/21/15	3/4/17	Contig	SC	SAMEA1025895	GCA_001142145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/145/GCA_001142145.1_6925_4_24	-	SMRU2160
Pseudomonas aeruginosa	287	PRJNA311177	311177	Proteobacteria	Gammaproteobacteria	6.77547	66	-	LYLN01	216	6502	6232	12/23/16	3/22/17	Contig	University Hospital of Besancon	SAMN04479284	GCA_001920965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/920/965/GCA_001920965.1_ASM192096v1	-	S-Pae
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.09716	38.9	-	LLJD01	318	4009	3778	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145774	GCA_001417495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/495/GCA_001417495.1_ASM141749v1	-	ABOB12
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.67256	57.1	-	MPYK03	72	5721	5489	12/14/16	5/6/17	Contig	JCVI	SAMN05956151	GCA_001904245.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/245/GCA_001904245.3_ASM190424v3	-	1699_2676
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16695	64.1	-	FSOY01	17	5197	5096	12/14/16	3/21/17	Scaffold	SC	SAMEA2162740	GCA_900140625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/625/GCA_900140625.1_10702_1_27	-	601
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.9509	64.2	-	FVWS01	15	4985	4848	3/10/17	3/18/17	Scaffold	SC	SAMEA2157017	GCA_900140635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/635/GCA_900140635.1_10702_1_29	-	603
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.74055	57	-	MPXY03	123	5909	5650	12/14/16	5/6/17	Contig	JCVI	SAMN05956081	GCA_001904255.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/255/GCA_001904255.3_ASM190425v3	-	975_1913
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.95593	39	-	LLJG01	429	3863	3617	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145777	GCA_001417515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/515/GCA_001417515.1_ASM141751v1	-	ABOBEN
Pseudomonas aeruginosa	287	PRJNA348176	348176	Proteobacteria	Gammaproteobacteria	6.39379	66.3	-	MLQX01	96	6059	5903	1/6/17	3/22/17	Contig	LAU	SAMN05905560	GCA_001937975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/975/GCA_001937975.1_ASM193797v1	-	PSEUDO-LEB
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.03167	39.6	-	CMMJ01	64	2234	2022	3/23/15	3/4/17	Contig	SC	SAMEA1029234	GCA_001142185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/185/GCA_001142185.1_7068_4_17	-	SMRU3137
Escherichia coli A35218R	1269009	PRJNA183832	183832	Proteobacteria	Gammaproteobacteria	5.02434	50.4	-	AXUC01	103	5134	4795	10/25/13	2/23/17	Scaffold	Washington University	SAMN02436735	GCA_000488835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/488/835/GCA_000488835.1_ASM48883v1	-	A35218R
Mycobacterium tuberculosis TKK_02_0014	1397859	PRJNA218231	218231	Terrabacteria group	Actinobacteria	4.40503	65.6	-	JLVW01	1	4281	4116	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350414	GCA_000671895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/895/GCA_000671895.1_Myco_tube_TKK_02_0014_V1	-	TKK_02_0014
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.88821	37.9	-	MKON01	18	2927	2846	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277713	GCA_001760655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/655/GCA_001760655.1_BCW_3875	-	NRRL B-33567
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93259	51.8	-	CITO01	54	5129	4756	3/21/15	2/27/17	Contig	SC	SAMEA2066344	GCA_001080545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/545/GCA_001080545.1_10071_8_76	-	2010K-0522
Staphylococcus aureus M1454	1398064	PRJNA218440	218440	Terrabacteria group	Firmicutes	2.85872	32.8	-	JCZF01	55	3030	2848	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350619	GCA_000549145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/145/GCA_000549145.1_Stap_aure_M1454_V1	-	M1454
Staphylococcus aureus M1455	1398065	PRJNA218441	218441	Terrabacteria group	Firmicutes	2.86506	32.9	-	JCZG01	46	3001	2816	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350620	GCA_000549165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/165/GCA_000549165.1_Stap_aure_M1455_V1	-	M1455
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70069	52.1	-	CIQR01	42	4860	4498	3/21/15	2/27/17	Contig	SC	SAMEA2056199	GCA_001080565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/565/GCA_001080565.1_10071_3_48	-	520772
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.92243	37.8	-	MKOO01	22	2952	2866	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277723	GCA_001760685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/685/GCA_001760685.1_BCW_3876	-	NRRL B-33568
Mycobacterium tuberculosis TKK_02_0015	1397860	PRJNA218232	218232	Terrabacteria group	Actinobacteria	4.40488	65.6	-	JLVV01	3	4282	4112	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350415	GCA_000671915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/915/GCA_000671915.1_Myco_tube_TKK_02_0015_V1	-	TKK_02_0015
Escherichia coli BIDMC 39	1328450	PRJNA202051	202051	Proteobacteria	Gammaproteobacteria	4.88292	50.9	-	AYHT01	17	5039	4624	10/30/13	2/22/17	Scaffold	Broad Institute	SAMN02138670	GCA_000492235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/235/GCA_000492235.1_Esch_coli_BIDMC_39_V1	-	BIDMC 39
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09607	39.6	-	CODW02	128	2285	2063	3/22/15	3/11/17	Contig	SC	SAMEA1463270	GCA_001142225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/225/GCA_001142225.2_7622_4_37	-	LE4119
Pseudomonas aeruginosa	287	PRJNA369567	369567	Proteobacteria	Gammaproteobacteria	6.42832	66.3	-	MUKY01	50	6115	5960	2/8/17	3/22/17	Contig	SCH	SAMN06289378	GCA_001990285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/285/GCA_001990285.1_ASM199028v1	-	SCH_ABX20
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.9827	39.1	-	LLIR01	449	3902	3645	10/27/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145762	GCA_001417545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/545/GCA_001417545.1_ASM141754v1	-	ABOB02
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.88953	57	-	MPYX03	160	6029	5750	12/14/16	5/6/17	Contig	JCVI	SAMN05956145	GCA_001904295.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/295/GCA_001904295.3_ASM190429v3	-	2049_3064
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.10513	64.2	-	FSOZ01	18	5107	5003	12/14/16	3/21/17	Scaffold	SC	SAMEA2154104	GCA_900140645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/645/GCA_900140645.1_10702_1_28	-	602
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.17468	64.2	-	FVWX01	37	5182	5030	3/10/17	3/18/17	Scaffold	SC	SAMEA2147154	GCA_900140655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/655/GCA_900140655.1_10702_1_32	-	607
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.88843	57	-	MPYY03	174	6035	5747	12/14/16	5/6/17	Contig	JCVI	SAMN05956146	GCA_001904315.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/315/GCA_001904315.3_ASM190431v3	-	2049_3066
Acinetobacter baumannii	470	PRJNA294951	294951	Proteobacteria	Gammaproteobacteria	3.99724	39	-	LKMA01	217	3925	3659	11/5/15	6/4/17	Contig	LAU	SAMN04088953	GCA_001432265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/265/GCA_001432265.1_ASM143226v1	26823599	ACMH-6200
Pseudomonas aeruginosa	287	PRJNA369567	369567	Proteobacteria	Gammaproteobacteria	6.40993	66.4	-	MULH01	69	6134	5977	2/8/17	3/22/17	Contig	SCH	SAMN06289368	GCA_001990295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/295/GCA_001990295.1_ASM199029v1	-	SCH_ABX10
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07064	39.6	-	CNPO02	210	2248	2051	3/23/15	3/11/17	Contig	SC	SAMEA1032624	GCA_001142425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/425/GCA_001142425.2_6952_4_14	-	462956
Escherichia coli BIDMC 38	1328449	PRJNA202050	202050	Proteobacteria	Gammaproteobacteria	5.26985	50.8	-	AYHU01	15	5478	5111	10/30/13	2/22/17	Scaffold	Broad Institute	SAMN02138669	GCA_000492255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/255/GCA_000492255.1_Esch_coli_BIDMC_38_V1	-	BIDMC 38
Mycobacterium tuberculosis TKK_02_0016	1397861	PRJNA218233	218233	Terrabacteria group	Actinobacteria	4.40319	65.6	-	JLVU01	1	4282	4116	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350416	GCA_000671935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/935/GCA_000671935.1_Myco_tube_TKK_02_0016_V1	-	TKK_02_0016
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.90901	37.9	-	MKOQ01	24	2913	2843	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277676	GCA_001760725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/725/GCA_001760725.1_BCW_3878	-	NRRL B-33571
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72056	52	-	CIND01	52	4879	4528	3/21/15	2/27/17	Contig	SC	SAMEA2058812	GCA_001080585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/585/GCA_001080585.1_10060_5_66	-	110829
Staphylococcus aureus M1456	1398066	PRJNA218442	218442	Terrabacteria group	Firmicutes	2.88931	32.9	-	JCZH01	49	3057	2881	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350621	GCA_000549185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/185/GCA_000549185.1_Stap_aure_M1456_V1	-	M1456
Staphylococcus aureus M1457	1398067	PRJNA218443	218443	Terrabacteria group	Firmicutes	2.85658	32.8	-	JCZI01	38	3014	2850	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350622	GCA_000549205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/205/GCA_000549205.1_Stap_aure_M1457_V1	-	M1457
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7419	52.1	-	CIPK01	43	4910	4558	3/21/15	2/27/17	Contig	SC	SAMEA2055439	GCA_001080605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/605/GCA_001080605.1_10060_6_68	-	XN211
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.87443	38	-	MKOR01	52	2858	2782	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277703	GCA_001760735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/735/GCA_001760735.1_BCW_3879	-	NRRL B-33574
Mycobacterium tuberculosis TKK_02_0017	1397862	PRJNA218234	218234	Terrabacteria group	Actinobacteria	4.40509	65.6	-	JLVT01	2	4270	4107	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350417	GCA_000671955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/955/GCA_000671955.1_Myco_tube_TKK_02_0017_V1	-	TKK_02_0017
Escherichia coli BIDMC 37	1328448	PRJNA202049	202049	Proteobacteria	Gammaproteobacteria	4.66524	50.8	-	AYHV01	6	4818	4421	10/30/13	2/23/17	Scaffold	Broad Institute	SAMN02138668	GCA_000492275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/275/GCA_000492275.1_Esch_coli_BIDMC_37_V1	-	BIDMC 37
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.06138	39.6	-	CRJF01	62	2259	2033	3/23/15	3/4/17	Contig	SC	SAMEA1025603	GCA_001142445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/445/GCA_001142445.1_6753_2_11	-	SMRU1500
Pseudomonas aeruginosa	287	PRJNA369567	369567	Proteobacteria	Gammaproteobacteria	6.40106	66.4	-	MULC01	59	6095	5937	2/8/17	3/22/17	Contig	SCH	SAMN06289373	GCA_001990345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/345/GCA_001990345.1_ASM199034v1	-	SCH_ABX15
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.95437	38.9	-	LLCJ01	70	3906	3681	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145614	GCA_001432375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/375/GCA_001432375.1_ASM143237v1	-	ABBL003
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.55733	57.2	-	MPYB03	125	5715	5468	12/14/16	5/6/17	Contig	JCVI	SAMN05956084	GCA_001904325.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/325/GCA_001904325.3_ASM190432v3	-	1041_1933
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21081	64.2	-	FSPB01	39	5223	5071	12/14/16	3/21/17	Scaffold	SC	SAMEA2150272	GCA_900140665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/665/GCA_900140665.1_10702_1_30	-	604
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.11697	64.1	-	FVWW01	24	5138	5034	3/10/17	3/18/17	Scaffold	SC	SAMEA2152558	GCA_900140675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/675/GCA_900140675.1_10702_1_3	-	541
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.51765	57.2	-	MPYD03	96	5622	5411	12/14/16	5/6/17	Contig	JCVI	SAMN05956086	GCA_001904335.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/335/GCA_001904335.3_ASM190433v3	-	1084_1957
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.06775	38.9	-	LLCM01	77	3967	3728	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145617	GCA_001432385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/385/GCA_001432385.1_ASM143238v1	-	ABBL006
Pseudomonas aeruginosa	287	PRJNA369567	369567	Proteobacteria	Gammaproteobacteria	6.35683	66.5	-	MULG01	49	6020	5879	2/8/17	3/22/17	Contig	SCH	SAMN06289369	GCA_001990425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/425/GCA_001990425.1_ASM199042v1	-	SCH_ABX11
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.0813	39.6	-	CMFI01	64	2293	2050	3/21/15	3/6/17	Contig	SC	SAMEA1028627	GCA_001142465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/465/GCA_001142465.1_7011_6_13	-	SMRU2821
Escherichia coli BWH 32	1328432	PRJNA201972	201972	Proteobacteria	Gammaproteobacteria	5.11541	50.5	-	AYIO01	24	5156	4846	10/30/13	2/23/17	Scaffold	Broad Institute	SAMN02138597	GCA_000492655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/492/655/GCA_000492655.1_Esch_coli_BWH_32_V1	-	BWH 32
Mycobacterium tuberculosis TKK_02_0018	1397863	PRJNA218235	218235	Terrabacteria group	Actinobacteria	4.41659	65.6	-	JLVS01	4	4296	4118	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350418	GCA_000671975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/975/GCA_000671975.1_Myco_tube_TKK_02_0018_V1	-	TKK_02_0018
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.0042	37.8	-	MKOS01	49	3070	2994	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277693	GCA_001760765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/765/GCA_001760765.1_BCW_3880	-	NRRL B-33578
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82695	52	-	CITI01	40	5000	4644	3/21/15	2/27/17	Contig	SC	SAMEA2066338	GCA_001080665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/665/GCA_001080665.1_10071_8_55	-	Gen-0055
Staphylococcus aureus M1458	1398068	PRJNA218444	218444	Terrabacteria group	Firmicutes	2.87433	32.8	-	JCZJ01	40	3043	2866	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350623	GCA_000549225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/225/GCA_000549225.1_Stap_aure_M1458_V1	-	M1458
Staphylococcus aureus M1459	1398069	PRJNA218445	218445	Terrabacteria group	Firmicutes	2.86018	32.9	-	JCZK01	15	2998	2833	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350624	GCA_000549245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/245/GCA_000549245.1_Stap_aure_M1459_V1	-	M1459
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72422	52.1	-	CIRU01	44	4904	4555	3/21/15	2/27/17	Contig	SC	SAMEA2057237	GCA_001080745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/745/GCA_001080745.1_10071_3_89	-	A132
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.94048	37.9	-	MKOT01	17	2991	2898	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277671	GCA_001760775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/775/GCA_001760775.1_BCW_3881	-	NRRL B-33582
Mycobacterium tuberculosis TKK_02_0019	1397864	PRJNA218236	218236	Terrabacteria group	Actinobacteria	4.40786	65.6	-	JLVR01	2	4287	4117	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350419	GCA_000671995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/995/GCA_000671995.1_Myco_tube_TKK_02_0019_V1	-	TKK_02_0019
Escherichia coli HVH 36 (4-5675286)	1280986	PRJNA186068	186068	Proteobacteria	Gammaproteobacteria	5.4721	50.7	-	AYLQ01	15	5635	5245	11/1/13	2/22/17	Scaffold	Broad Institute	SAMN01885698	GCA_000494935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/935/GCA_000494935.1_Esch_coli_HVH_36_4-5675286_V1	-	HVH 36 (4-5675286)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0353	39.7	-	CNUA02	163	2198	1998	3/22/15	3/11/17	Contig	SC	SAMEA1032578	GCA_001142545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/545/GCA_001142545.2_6999_5_17	-	208866
Pseudomonas aeruginosa	287	PRJNA369567	369567	Proteobacteria	Gammaproteobacteria	6.35793	66.4	-	MVBP01	65	6058	5905	2/16/17	3/22/17	Contig	SCH	SAMN06289367	GCA_002001225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/225/GCA_002001225.1_ASM200122v1	-	SCH_ABX09
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.85222	39	-	LLCU01	194	3957	3495	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145625	GCA_001432425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/425/GCA_001432425.1_ASM143242v1	-	ABBL014
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.54488	57.2	-	MPYE03	128	5689	5457	12/14/16	5/6/17	Contig	JCVI	SAMN05956087	GCA_001904375.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/375/GCA_001904375.3_ASM190437v3	-	1085_1956
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16041	64.1	-	FSPA01	16	5203	5105	12/14/16	3/21/17	Scaffold	SC	SAMEA2156508	GCA_900140685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/685/GCA_900140685.1_10702_1_31	-	606
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.09209	64.1	-	FSPF01	15	5097	5001	12/14/16	3/21/17	Scaffold	SC	SAMEA2145082	GCA_900140715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/715/GCA_900140715.1_10702_1_36	-	615
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.54296	57.2	-	MPXZ03	100	5681	5436	12/14/16	5/6/17	Contig	JCVI	SAMN05956082	GCA_001904385.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/385/GCA_001904385.3_ASM190438v3	-	977_1916
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.02018	39.2	-	LLCP01	72	3950	3755	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145620	GCA_001432445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/445/GCA_001432445.1_ASM143244v1	-	ABBL009
Pseudomonas aeruginosa	287	PRJNA369567	369567	Proteobacteria	Gammaproteobacteria	6.70315	66.2	-	MVBX01	96	6418	6217	2/16/17	3/22/17	Contig	SCH	SAMN06289359	GCA_002001235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/235/GCA_002001235.1_ASM200123v1	-	SCH_ABX01
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08248	39.5	-	CKYB01	57	2284	2047	3/21/15	3/10/17	Contig	SC	SAMEA1025951	GCA_001142685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/685/GCA_001142685.1_6823_7_9	-	SMRU2001
Escherichia coli HVH 12 (4-7653042)	1280965	PRJNA186047	186047	Proteobacteria	Gammaproteobacteria	5.294	50.6	-	AVTG01	9	5401	5063	11/1/13	2/23/17	Scaffold	Broad Institute	SAMN01885677	GCA_000494955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/955/GCA_000494955.1_Esch_coli_HVH_12_4-7653042_V1	-	HVH 12 (4-7653042)
Mycobacterium tuberculosis TKK_02_0020	1397865	PRJNA218237	218237	Terrabacteria group	Actinobacteria	4.4033	65.6	-	JLVQ01	1	4281	4111	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350420	GCA_000672015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/015/GCA_000672015.1_Myco_tube_TKK_02_0020_V1	-	TKK_02_0020
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.91101	38	-	MKOU01	17	2905	2840	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277672	GCA_001760805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/805/GCA_001760805.1_BCW_3882	-	NRRL B-33583
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73495	52	-	CINL01	48	4897	4534	3/21/15	2/27/17	Contig	SC	SAMEA2056810	GCA_001080765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/765/GCA_001080765.1_10060_5_40	-	A250
Staphylococcus aureus M1460	1398070	PRJNA218446	218446	Terrabacteria group	Firmicutes	2.85861	32.8	-	JCZL01	53	3017	2847	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350625	GCA_000549265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/265/GCA_000549265.1_Stap_aure_M1460_V1	-	M1460
Staphylococcus aureus M1461	1398071	PRJNA218447	218447	Terrabacteria group	Firmicutes	2.86676	32.8	-	JCZM01	38	3020	2854	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350626	GCA_000549285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/285/GCA_000549285.1_Stap_aure_M1461_V1	-	M1461
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93416	51.8	-	CITV01	56	5137	4749	3/21/15	2/27/17	Contig	SC	SAMEA2064167	GCA_001080785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/785/GCA_001080785.1_10071_8_66	-	2010K-0519
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.9061	37.9	-	MKOV01	22	2914	2852	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277677	GCA_001760815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/815/GCA_001760815.1_BCW_3883	-	NRRL B-33587
Mycobacterium tuberculosis TKK_02_0021	1397866	PRJNA218238	218238	Terrabacteria group	Actinobacteria	4.3965	65.6	-	JLVP01	1	4278	4115	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350421	GCA_000672035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/035/GCA_000672035.1_Myco_tube_TKK_02_0021_V1	-	TKK_02_0021
Escherichia coli HVH 86 (4-7026218)	1281023	PRJNA186108	186108	Proteobacteria	Gammaproteobacteria	5.61956	50.4	-	AVVH01	19	5797	5374	11/1/13	2/23/17	Scaffold	Broad Institute	SAMN01885735	GCA_000494975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/975/GCA_000494975.1_Esch_coli_HVH_86_4-7026218_V1	-	HVH 86 (4-7026218)
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	1.95127	39.8	-	CMOO01	33	2132	1914	3/23/15	3/10/17	Contig	SC	SAMEA2061496	GCA_001142705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/705/GCA_001142705.1_9803_7_33	-	8
Pseudomonas aeruginosa	287	PRJNA369567	369567	Proteobacteria	Gammaproteobacteria	6.56873	66.3	-	MVBV01	86	6345	6169	2/16/17	3/22/17	Contig	SCH	SAMN06289363	GCA_002001265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/265/GCA_002001265.1_ASM200126v1	-	SCH_ABX05
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.00363	38.9	-	LLCR01	70	3866	3682	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145622	GCA_001432455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/455/GCA_001432455.1_ASM143245v1	-	ABBL011
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.51295	57.2	-	MPYC03	76	5564	5332	12/14/16	5/6/17	Contig	JCVI	SAMN05956085	GCA_001904405.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/405/GCA_001904405.3_ASM190440v3	-	1075_1947
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.98985	64.2	-	FSPC01	23	4997	4895	12/14/16	3/21/17	Scaffold	SC	SAMEA2144787	GCA_900140725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/725/GCA_900140725.1_10702_1_33	-	611
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.08516	64.2	-	FSPG01	17	5126	5008	12/14/16	3/21/17	Scaffold	SC	SAMEA2157837	GCA_900140745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/745/GCA_900140745.1_10702_1_39	-	619
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.80794	56.9	-	MPYA03	129	5995	5754	12/14/16	5/6/17	Contig	JCVI	SAMN05956083	GCA_001904425.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/425/GCA_001904425.3_ASM190442v3	-	982_1922
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.01847	38.9	-	LLCX01	94	3958	3677	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145628	GCA_001432525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/525/GCA_001432525.1_ASM143252v1	-	ABBL017
Pseudomonas aeruginosa	287	PRJNA369567	369567	Proteobacteria	Gammaproteobacteria	6.57308	66.3	-	MVBS01	68	6342	6170	2/16/17	3/22/17	Contig	SCH	SAMN06289364	GCA_002001275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/275/GCA_002001275.1_ASM200127v1	-	SCH_ABX06
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08216	39.6	-	COCT02	141	2293	2064	3/23/15	3/11/17	Contig	SC	SAMEA1463225	GCA_001142845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/845/GCA_001142845.2_7622_3_81	-	GL3021
Escherichia coli HVH 136 (4-5970458)	1281069	PRJNA186161	186161	Proteobacteria	Gammaproteobacteria	5.43759	50.6	-	AVWV01	14	5628	5284	11/1/13	2/22/17	Scaffold	Broad Institute	SAMN01885781	GCA_000494995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/995/GCA_000494995.1_Esch_coli_HVH_136_4-5970458_V1	-	HVH 136 (4-5970458)
Mycobacterium tuberculosis TKK_02_0022	1397867	PRJNA218239	218239	Terrabacteria group	Actinobacteria	4.40188	65.6	-	JLVO01	1	4276	4112	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350422	GCA_000672055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/055/GCA_000672055.1_Myco_tube_TKK_02_0022_V1	-	TKK_02_0022
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.93985	37.9	-	MKOW01	23	2962	2870	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277690	GCA_001760845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/845/GCA_001760845.1_BCW_3884	-	NRRL B-33590
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82614	52	-	CITG01	45	5013	4650	3/21/15	2/27/17	Contig	SC	SAMEA2066339	GCA_001080845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/845/GCA_001080845.1_10071_8_58	-	Gen-0058
Staphylococcus aureus M1464	1398072	PRJNA218448	218448	Terrabacteria group	Firmicutes	2.87454	32.9	-	JCZN01	23	3001	2831	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350627	GCA_000549305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/305/GCA_000549305.1_Stap_aure_M1464_V1	-	M1464
Staphylococcus aureus M1465	1398073	PRJNA218449	218449	Terrabacteria group	Firmicutes	2.91702	32.9	-	JCZO01	71	3115	2920	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350628	GCA_000549325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/325/GCA_000549325.1_Stap_aure_M1465_V1	-	M1465
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82611	52	-	CISB01	40	5003	4649	3/21/15	2/27/17	Contig	SC	SAMEA2066177	GCA_001080905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/905/GCA_001080905.1_10071_8_16	-	Gen-0016
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.95068	38	-	MKOX01	22	2993	2901	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277691	GCA_001760855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/855/GCA_001760855.1_BCW_3885	-	NRRL B-33591
Mycobacterium tuberculosis TKK_02_0025	1397868	PRJNA218240	218240	Terrabacteria group	Actinobacteria	4.43033	65.5	-	JLVN01	4	4298	4131	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350423	GCA_000672075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/075/GCA_000672075.1_Myco_tube_TKK_02_0025_V1	-	TKK_02_0025
Escherichia coli HVH 148 (4-3192490)	1281081	PRJNA186180	186180	Proteobacteria	Gammaproteobacteria	5.33224	50.5	-	AVXH01	13	5485	5116	11/1/13	2/22/17	Scaffold	Broad Institute	SAMN01885793	GCA_000495015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/015/GCA_000495015.1_Esch_coli_HVH_148_4-3192490_V1	-	HVH 148 (4-3192490)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05134	39.6	-	CNQJ02	235	2166	1980	3/22/15	3/5/17	Contig	SC	SAMEA1032589	GCA_001143085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/085/GCA_001143085.2_6952_7_18	-	R34-3178
Pseudomonas aeruginosa	287	PRJNA369567	369567	Proteobacteria	Gammaproteobacteria	6.69501	66.3	-	MVBU01	61	6374	6202	2/16/17	3/22/17	Contig	SCH	SAMN06289361	GCA_002001315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/315/GCA_002001315.1_ASM200131v1	-	SCH_ABX03
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.8075	38.8	-	LLDA01	87	3743	3521	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145631	GCA_001432535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/535/GCA_001432535.1_ASM143253v1	-	ABBL020
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.64797	57.1	-	MPXX03	111	5782	5549	12/14/16	5/6/17	Contig	JCVI	SAMN05956080	GCA_001904455.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/455/GCA_001904455.3_ASM190445v3	-	935_1884
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.90948	64.3	-	FVWY01	13	4873	4732	3/10/17	3/18/17	Scaffold	SC	SAMEA2155514	GCA_900140755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/755/GCA_900140755.1_10702_1_38	-	618
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.17269	64	-	FVXA01	27	5228	5068	3/10/17	3/18/17	Scaffold	SC	SAMEA2145164	GCA_900140765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/765/GCA_900140765.1_10702_1_40	-	620
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.57523	57.3	-	MPZF03	115	5649	5401	12/14/16	5/6/17	Contig	JCVI	SAMN05956127	GCA_001904475.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/475/GCA_001904475.3_ASM190447v3	-	1531_2471
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.33474	38.9	-	LLCY01	207	4295	3967	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145629	GCA_001432545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/545/GCA_001432545.1_ASM143254v1	-	ABBL018
Pseudomonas aeruginosa	287	PRJNA369567	369567	Proteobacteria	Gammaproteobacteria	6.49484	66.4	-	MVBR01	68	6158	6002	2/16/17	3/22/17	Contig	SCH	SAMN06289365	GCA_002001385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/385/GCA_002001385.1_ASM200138v1	-	SCH_ABX07
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.0903	39.7	-	CMEF01	69	2305	2085	3/21/15	3/10/17	Contig	SC	SAMEA1028976	GCA_001143185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/185/GCA_001143185.1_7011_4_3	-	SMRU2763
Escherichia coli HVH 152 (4-3447545)	1281085	PRJNA186184	186184	Proteobacteria	Gammaproteobacteria	5.08345	50.5	-	AVXL01	53	5113	4691	11/1/13	2/22/17	Scaffold	Broad Institute	SAMN01885797	GCA_000495035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/035/GCA_000495035.1_Esch_coli_HVH_152_4-3447545_V1	-	HVH 152 (4-3447545)
Mycobacterium tuberculosis TKK_02_0027	1397869	PRJNA218241	218241	Terrabacteria group	Actinobacteria	4.41657	65.5	-	JLVM01	2	4269	4113	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350424	GCA_000672095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/095/GCA_000672095.1_Myco_tube_TKK_02_0027_V1	-	TKK_02_0027
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.94082	37.9	-	MKOZ01	27	2948	2859	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277722	GCA_001760895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/895/GCA_001760895.1_BCW_3887	-	NRRL B-33600
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70025	52.1	-	CIQP01	46	4857	4497	3/21/15	2/27/17	Contig	SC	SAMEA2059027	GCA_001080985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/985/GCA_001080985.1_10071_3_40	-	141461
Staphylococcus aureus M1467	1398074	PRJNA218450	218450	Terrabacteria group	Firmicutes	2.84132	32.8	-	JCZP01	43	2991	2819	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350629	GCA_000549345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/345/GCA_000549345.1_Stap_aure_M1467_V1	-	M1467
Staphylococcus aureus M1469	1398076	PRJNA218452	218452	Terrabacteria group	Firmicutes	2.85235	32.8	-	JCZQ01	49	3018	2848	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350631	GCA_000549365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/365/GCA_000549365.1_Stap_aure_M1469_V1	-	M1469
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82775	52	-	CISV01	41	5012	4651	3/21/15	2/27/17	Contig	SC	SAMEA2066334	GCA_001081005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/005/GCA_001081005.1_10071_8_43	-	Gen-0043
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.94724	37.9	-	MKPA01	19	2996	2898	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277642	GCA_001760925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/925/GCA_001760925.1_BCW_3888	-	NRRL B-33607
Mycobacterium tuberculosis TKK_02_0033	1397871	PRJNA218243	218243	Terrabacteria group	Actinobacteria	4.40607	65.6	-	JLVL01	1	4281	4115	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350426	GCA_000672115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/115/GCA_000672115.1_Myco_tube_TKK_02_0033_V1	-	TKK_02_0033
Escherichia coli HVH 178 (4-3189163)	1281107	PRJNA186206	186206	Proteobacteria	Gammaproteobacteria	5.14158	50.6	-	AVYG01	7	5323	4930	11/1/13	2/23/17	Scaffold	Broad Institute	SAMN01885819	GCA_000495055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/055/GCA_000495055.1_Esch_coli_HVH_178_4-3189163_V1	-	HVH 178 (4-3189163)
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.03823	39.7	-	CRPY01	74	2249	2045	3/23/15	3/10/17	Contig	SC	SAMEA1024632	GCA_001143205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/205/GCA_001143205.1_6775_2_13	-	SMRU853
Pseudomonas aeruginosa	287	PRJNA338510	338510	Proteobacteria	Gammaproteobacteria	6.89159	66	-	MPCQ01	143	6746	6482	2/16/17	3/22/17	Contig	University of Malaya	SAMN05559828	GCA_002002365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/365/GCA_002002365.1_ASM200236v1	-	PAC08
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.9952	38.9	-	LLDC01	84	3925	3687	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145633	GCA_001432585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/585/GCA_001432585.1_ASM143258v1	-	ABBL022
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.82649	56.8	-	MPZK03	124	5962	5725	12/14/16	5/6/17	Contig	JCVI	SAMN05956132	GCA_001904485.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/485/GCA_001904485.3_ASM190448v3	-	1562_2499
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.65955	64.3	-	FVXD01	15	4616	4484	3/10/17	3/18/17	Scaffold	SC	SAMEA2145943	GCA_900140775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/775/GCA_900140775.1_10702_1_45	-	628
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.07924	64.1	-	FVXB01	24	5080	4970	3/10/17	3/18/17	Scaffold	SC	SAMEA2154242	GCA_900140785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/785/GCA_900140785.1_10702_1_41	-	621
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.75594	57	-	MPZB03	132	5886	5623	12/14/16	5/6/17	Contig	JCVI	SAMN05956149	GCA_001904495.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/495/GCA_001904495.3_ASM190449v3	-	2073_3098
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.9497	38.9	-	LLDB01	70	3887	3681	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145632	GCA_001432595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/595/GCA_001432595.1_ASM143259v1	-	ABBL021
Pseudomonas aeruginosa	287	PRJNA338510	338510	Proteobacteria	Gammaproteobacteria	6.84167	66.1	-	MPCR01	125	6517	6274	2/16/17	3/22/17	Contig	University of Malaya	SAMN05559829	GCA_002002765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/765/GCA_002002765.1_ASM200276v1	-	PAC17
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09985	39.6	-	CNNS02	203	2259	2055	3/22/15	3/5/17	Contig	SC	SAMEA1032430	GCA_001143245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/245/GCA_001143245.2_6925_1_56	-	R34-3037
Escherichia coli UMEA 3148-1	1281192	PRJNA186294	186294	Proteobacteria	Gammaproteobacteria	5.13073	50.9	-	AWBM01	13	5331	4984	11/1/13	2/23/17	Scaffold	Broad Institute	SAMN01885904	GCA_000495075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/075/GCA_000495075.1_Esch_coli_UMEA_3148-1_V1	-	UMEA 3148-1
Mycobacterium tuberculosis TKK_02_0034	1397872	PRJNA218244	218244	Terrabacteria group	Actinobacteria	4.42803	65.5	-	JLVK01	1	4284	4114	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350427	GCA_000672135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/135/GCA_000672135.1_Myco_tube_TKK_02_0034_V1	-	TKK_02_0034
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.92639	37.9	-	MKPB01	18	2961	2885	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277696	GCA_001760935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/935/GCA_001760935.1_BCW_3889	-	NRRL B-33615
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70863	52.1	-	CIRP01	46	4867	4516	3/21/15	2/27/17	Contig	SC	SAMEA2059204	GCA_001081045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/045/GCA_001081045.1_10071_3_88	-	A131
Staphylococcus aureus M1470	1398077	PRJNA218453	218453	Terrabacteria group	Firmicutes	2.93457	32.9	-	JCZR01	78	3121	2931	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350632	GCA_000549385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/385/GCA_000549385.1_Stap_aure_M1470_V1	-	M1470
Staphylococcus aureus M1471	1398078	PRJNA218454	218454	Terrabacteria group	Firmicutes	2.85164	32.8	-	JCZS01	54	3012	2846	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350633	GCA_000549405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/405/GCA_000549405.1_Stap_aure_M1471_V1	-	M1471
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93445	51.8	-	CINT01	64	5131	4746	3/21/15	2/27/17	Contig	SC	SAMEA2055784	GCA_001081085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/085/GCA_001081085.1_10060_5_5	-	2012-010389
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.85657	38.1	-	MKPC01	10	2870	2782	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277646	GCA_001760965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/965/GCA_001760965.1_BCW_3890	-	NRRL B-33617
Mycobacterium tuberculosis TKK_02_0036	1397873	PRJNA218245	218245	Terrabacteria group	Actinobacteria	4.39876	65.6	-	JLVJ01	18	4273	4103	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350428	GCA_000672155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/155/GCA_000672155.1_Myco_tube_TKK_02_0036_V1	-	TKK_02_0036
Escherichia coli HVH 108 (4-6924867)	1281044	PRJNA186129	186129	Proteobacteria	Gammaproteobacteria	5.25178	50.4	-	AVVW01	19	5401	5081	11/1/13	2/22/17	Scaffold	Broad Institute	SAMN01885756	GCA_000495095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/095/GCA_000495095.1_Esch_coli_HVH_108_4-6924867_V1	-	HVH 108 (4-6924867)
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.13224	39.6	-	CKCB01	50	2365	2120	3/21/15	3/11/17	Contig	SC	SAMEA1024125	GCA_001143425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/425/GCA_001143425.1_6593_4_15	-	4
Pseudomonas aeruginosa	287	PRJNA361432	361432	Proteobacteria	Gammaproteobacteria	6.76417	66.2	-	MVDK01	240	6510	6166	2/17/17	4/26/17	Contig	International University of Africa	SAMN06233741	GCA_002003595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/003/595/GCA_002003595.1_ASM200359v1	28428302	Kasamber
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.00223	39	-	LLDD01	641	3976	3672	11/5/15	4/10/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145634	GCA_001432625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/625/GCA_001432625.1_ASM143262v1	-	ABBL023
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.71442	57.1	-	MPZA03	120	5818	5572	12/14/16	5/6/17	Contig	JCVI	SAMN05956148	GCA_001904535.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/904/535/GCA_001904535.3_ASM190453v3	-	2030_3042
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.78225	64.2	-	FSPL01	19	4715	4604	12/14/16	3/21/17	Scaffold	SC	SAMEA2151402	GCA_900140825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/825/GCA_900140825.1_10702_1_50	-	634
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23952	64.1	-	FSPJ01	14	5277	5165	12/14/16	3/21/17	Scaffold	SC	SAMEA2149677	GCA_900140835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/835/GCA_900140835.1_10702_1_47	-	630
Klebsiella pneumoniae	573	PRJNA326665	326665	Proteobacteria	Gammaproteobacteria	5.5753	57.3	-	MAPN01	94	5652	5411	12/15/16	2/22/17	Contig	New Jersey Medical School-Rutgers University	SAMN05301547	GCA_001905185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/185/GCA_001905185.1_ASM190518v1	-	1438(2-A)
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.06752	39	-	LLDF01	75	3880	3704	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145636	GCA_001432665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/665/GCA_001432665.1_ASM143266v1	-	ABBL025
Pseudomonas aeruginosa	287	PRJNA369567	369567	Proteobacteria	Gammaproteobacteria	6.62269	66.1	-	MVBW01	101	6380	6173	2/16/17	2/25/17	Contig	SCH	SAMN06289360	GCA_002005755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/755/GCA_002005755.1_ASM200575v1	-	SCH_ABX02
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.2217	39.4	-	CMQM01	76	2440	2209	3/22/15	3/11/17	Contig	SC	SAMEA2061951	GCA_001143445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/445/GCA_001143445.1_9803_8_11	-	6B
Escherichia coli CE418	1331063	PRJNA201656	201656	Proteobacteria	Gammaproteobacteria	5.15773	50.4	-	ATEW01	615	5645	4893	11/14/13	2/23/17	Scaffold	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN02470026	GCA_000496975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/975/GCA_000496975.1_CE418_1	-	CE418
Mycobacterium tuberculosis TKK_02_0038	1397874	PRJNA218246	218246	Terrabacteria group	Actinobacteria	4.40895	65.6	-	JLVI01	1	4280	4114	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350429	GCA_000672175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/175/GCA_000672175.1_Myco_tube_TKK_02_0038_V1	-	TKK_02_0038
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.96725	37.9	-	MKPD01	20	3018	2932	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277647	GCA_001760975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/760/975/GCA_001760975.1_BCW_3891	-	NRRL B-33629
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73444	52	-	CILB01	48	4892	4533	3/21/15	2/27/17	Contig	SC	SAMEA2067642	GCA_001081105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/105/GCA_001081105.1_10071_8_59	-	Gen-0059
Staphylococcus aureus M1472	1398079	PRJNA218455	218455	Terrabacteria group	Firmicutes	2.85189	32.8	-	JCZT01	44	2989	2836	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02350634	GCA_000549425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/425/GCA_000549425.1_Stap_aure_M1472_V1	-	M1472
Staphylococcus aureus M1474	1398081	PRJNA218457	218457	Terrabacteria group	Firmicutes	2.90135	32.9	-	JCZU01	55	3050	2887	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02350636	GCA_000549445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/445/GCA_000549445.1_Stap_aure_M1474_V1	-	M1474
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71981	52	-	CITL01	43	4876	4524	3/21/15	2/27/17	Contig	SC	SAMEA2066174	GCA_001081125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/125/GCA_001081125.1_10071_8_7	-	Gen-0007
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.92012	37.9	-	MKPE01	18	2944	2870	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277645	GCA_001761005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/005/GCA_001761005.1_BCW_3892	-	NRRL B-33644
Mycobacterium tuberculosis TKK_02_0039	1397875	PRJNA218247	218247	Terrabacteria group	Actinobacteria	4.40426	65.6	-	JLVH01	1	4284	4116	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350430	GCA_000672195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/195/GCA_000672195.1_Myco_tube_TKK_02_0039_V1	-	TKK_02_0039
Escherichia coli CE516	1331064	PRJNA201657	201657	Proteobacteria	Gammaproteobacteria	5.07038	50.5	-	ATEX01	287	5322	4917	11/14/13	2/23/17	Scaffold	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN02470027	GCA_000496995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/995/GCA_000496995.1_CE516_1	-	CE516
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.03778	39.7	-	CRFR01	63	2282	2043	3/23/15	3/4/17	Contig	SC	SAMEA1025389	GCA_001143505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/505/GCA_001143505.1_6736_4_9	-	SMRU1209
Pseudomonas aeruginosa	287	PRJNA369567	369567	Proteobacteria	Gammaproteobacteria	6.77675	66.2	-	MVBQ01	73	6530	6348	2/16/17	2/25/17	Contig	SCH	SAMN06289366	GCA_002005765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/765/GCA_002005765.1_ASM200576v1	-	SCH_ABX08
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.87166	38.9	-	LLCI01	85	3846	3635	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145613	GCA_001432685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/685/GCA_001432685.1_ASM143268v1	-	ABBL001
Klebsiella pneumoniae	573	PRJNA326665	326665	Proteobacteria	Gammaproteobacteria	5.60102	57.4	-	MAPK01	196	5684	5423	12/15/16	2/22/17	Contig	New Jersey Medical School-Rutgers University	SAMN05301550	GCA_001905195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/195/GCA_001905195.1_ASM190519v1	-	1506(2-D)
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.01156	64.2	-	FVXE01	23	5015	4875	3/10/17	3/18/17	Scaffold	SC	SAMEA2152730	GCA_900140845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/845/GCA_900140845.1_10702_1_48	-	631
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.04993	64.1	-	FSPK01	17	5055	4958	12/14/16	3/21/17	Scaffold	SC	SAMEA2148965	GCA_900140855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/855/GCA_900140855.1_10702_1_49	-	633
Klebsiella pneumoniae	573	PRJNA326665	326665	Proteobacteria	Gammaproteobacteria	5.59707	57.3	-	MAPI01	222	5708	5448	12/15/16	2/22/17	Contig	New Jersey Medical School-Rutgers University	SAMN05301552	GCA_001905225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/225/GCA_001905225.1_ASM190522v1	-	1520(3-B)
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.85505	38.9	-	LLCK01	77	3794	3584	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145615	GCA_001432705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/705/GCA_001432705.1_ASM143270v1	-	ABBL004
Pseudomonas aeruginosa	287	PRJNA369218	369218	Proteobacteria	Gammaproteobacteria	6.84833	66	-	MWIE01	293	6654	6386	3/6/17	3/9/17	Contig	Spanish National Centre for Biotechnology	SAMN06279731	GCA_002021595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/595/GCA_002021595.1_ASM202159v1	-	COPD2a
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.08049	39.5	-	CLKQ01	85	2271	2068	3/21/15	3/4/17	Contig	SC	SAMEA1029407	GCA_001143565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/565/GCA_001143565.1_6938_3_31	-	SMRU3156
Escherichia coli CE549	1331065	PRJNA201658	201658	Proteobacteria	Gammaproteobacteria	4.85993	50.6	-	ATEY01	345	5092	4663	11/14/13	2/23/17	Scaffold	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN02470024	GCA_000497015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/497/015/GCA_000497015.1_CE549_1	-	CE549
Mycobacterium tuberculosis TKK_02_0045	1397876	PRJNA218248	218248	Terrabacteria group	Actinobacteria	4.40245	65.6	-	JLVG01	1	4283	4113	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350431	GCA_000672215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/215/GCA_000672215.1_Myco_tube_TKK_02_0045_V1	-	TKK_02_0045
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.89494	37.9	-	MKPH01	15	2934	2870	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277724	GCA_001761065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/065/GCA_001761065.1_BCW_3895	-	NRRL B-33793
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7851	52	-	CIPR01	45	4948	4576	3/21/15	2/27/17	Contig	SC	SAMEA2055443	GCA_001081145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/145/GCA_001081145.1_10060_6_80	-	129-0257-M
Staphylococcus aureus M1338	1403836	PRJNA221382	221382	Terrabacteria group	Firmicutes	2.86165	32.8	-	JCZV01	96	3041	2845	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02363975	GCA_000549465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/465/GCA_000549465.1_Stap_aure_M1338_V1	-	M1338
Staphylococcus aureus M1344	1403840	PRJNA221386	221386	Terrabacteria group	Firmicutes	2.86253	32.8	-	JCZW01	46	2998	2830	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02363979	GCA_000549485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/485/GCA_000549485.1_Stap_aure_M1344_V1	-	M1344
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.67705	52.1	-	CIRC01	39	4825	4481	3/21/15	3/2/17	Contig	SC	SAMEA2059034	GCA_001081185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/185/GCA_001081185.1_10071_3_64	-	316083
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.9706	37.9	-	MKPI01	12	3013	2924	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277725	GCA_001761085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/085/GCA_001761085.1_BCW_3896	-	NRRL B-33794
Mycobacterium tuberculosis TKK_02_0046	1397877	PRJNA218249	218249	Terrabacteria group	Actinobacteria	4.41558	65.5	-	JLVF01	6	4300	4099	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350432	GCA_000672235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/235/GCA_000672235.1_Myco_tube_TKK_02_0046_V1	-	TKK_02_0046
Escherichia coli HVH 23 (4-6066488)	1280974	PRJNA186056	186056	Proteobacteria	Gammaproteobacteria	5.0328	50.6	-	AZJK01	18	5130	4819	12/12/13	2/23/17	Scaffold	Broad Institute	SAMN01885686	GCA_000507605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/507/605/GCA_000507605.1_Esch_coli_HVH_23_4-6066488_V1	-	HVH 23 (4-6066488)
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.05006	39.6	-	CKOZ01	61	2219	1981	3/21/15	3/4/17	Contig	SC	SAMEA1024922	GCA_001143585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/585/GCA_001143585.1_6680_4_4	-	type strain: N
Pseudomonas aeruginosa	287	PRJNA369218	369218	Proteobacteria	Gammaproteobacteria	6.19138	66.4	-	MWLA01	228	5948	5714	3/6/17	3/9/17	Contig	Spanish National Centre for Biotechnology	SAMN06279744	GCA_002021605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/605/GCA_002021605.1_ASM202160v1	-	COPD2d
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.79996	38.9	-	LLCN01	893	4019	3342	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145618	GCA_001432745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/745/GCA_001432745.1_ASM143274v1	-	ABBL007
Klebsiella pneumoniae	573	PRJNA326665	326665	Proteobacteria	Gammaproteobacteria	5.60919	57.2	-	MAPH01	176	5729	5464	12/15/16	2/22/17	Contig	New Jersey Medical School-Rutgers University	SAMN05301553	GCA_001905235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/235/GCA_001905235.1_ASM190523v1	-	1526(3-C)
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16064	64.2	-	FVXF01	13	5249	5122	3/10/17	3/18/17	Scaffold	SC	SAMEA2144096	GCA_900140865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/865/GCA_900140865.1_10702_1_52	-	637
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.36277	64	-	FSPN01	23	5465	5314	12/14/16	3/21/17	Scaffold	SC	SAMEA2144805	GCA_900140875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/875/GCA_900140875.1_10702_1_54	-	639
Klebsiella pneumoniae	573	PRJNA326665	326665	Proteobacteria	Gammaproteobacteria	5.59913	57.3	-	MAPJ01	199	5719	5453	12/15/16	2/22/17	Contig	New Jersey Medical School-Rutgers University	SAMN05301551	GCA_001905315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/905/315/GCA_001905315.1_ASM190531v1	-	1439(3-A)
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.06419	39.1	-	LLCO01	89	4011	3823	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145619	GCA_001432755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/755/GCA_001432755.1_ASM143275v1	-	ABBL008
Pseudomonas aeruginosa	287	PRJNA369218	369218	Proteobacteria	Gammaproteobacteria	5.90584	66.1	-	MWLC02	156	5672	5472	3/6/17	4/24/17	Contig	Spanish National Centre for Biotechnology	SAMN06279746	GCA_002021635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/635/GCA_002021635.2_ASM202163v2	-	COPD6d
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.15855	39.6	-	CNTP02	211	2365	2149	3/23/15	3/5/17	Contig	SC	SAMEA1032603	GCA_001143705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/705/GCA_001143705.2_6999_4_4	-	89848
Escherichia coli HVH 83 (4-2051087)	1281020	PRJNA186105	186105	Proteobacteria	Gammaproteobacteria	5.1574	50.5	-	AZJL01	18	5314	4984	12/12/13	2/23/17	Scaffold	Broad Institute	SAMN01885732	GCA_000507625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/507/625/GCA_000507625.1_Esch_coli_HVH_83_4-2051087_V1	-	HVH 83 (4-2051087)
Mycobacterium tuberculosis TKK_02_0052	1397878	PRJNA218250	218250	Terrabacteria group	Actinobacteria	4.41444	65.5	-	JLVE01	2	4276	4108	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350433	GCA_000672255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/255/GCA_000672255.1_Myco_tube_TKK_02_0052_V1	-	TKK_02_0052
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.98287	37.8	-	MKPJ01	18	3056	2951	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277726	GCA_001761095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/095/GCA_001761095.1_BCW_3897	-	NRRL B-33795
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93152	51.8	-	CIOS01	54	5133	4744	3/21/15	2/27/17	Contig	SC	SAMEA1971400	GCA_001081225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/225/GCA_001081225.1_10060_6_54	-	UI5106
Staphylococcus aureus M1345	1403841	PRJNA221387	221387	Terrabacteria group	Firmicutes	2.86312	32.8	-	JCZX01	20	2996	2833	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02363980	GCA_000549505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/505/GCA_000549505.1_Stap_aure_M1345_V1	-	M1345
Staphylococcus aureus M1347	1403843	PRJNA221389	221389	Terrabacteria group	Firmicutes	2.88818	32.9	-	JCZY01	26	3034	2857	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02363982	GCA_000549525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/525/GCA_000549525.1_Stap_aure_M1347_V1	-	M1347
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82442	52	-	CITK01	43	4993	4638	3/21/15	2/27/17	Contig	SC	SAMEA2064163	GCA_001081245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/245/GCA_001081245.1_10071_8_54	-	Gen-0054
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.89419	38	-	MKPK01	14	2912	2831	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277770	GCA_001761125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/125/GCA_001761125.1_BCW_3898	-	NRRL B-33799
Mycobacterium tuberculosis TKK_02_0061	1397879	PRJNA218251	218251	Terrabacteria group	Actinobacteria	4.41286	65.6	-	JLVD01	5	4291	4110	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350434	GCA_000672275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/275/GCA_000672275.1_Myco_tube_TKK_02_0061_V1	-	TKK_02_0061
Escherichia coli HVH 177 (4-2876612)	1281106	PRJNA186205	186205	Proteobacteria	Gammaproteobacteria	5.06276	50.5	-	AZJM01	8	5146	4855	12/12/13	2/23/17	Scaffold	Broad Institute	SAMN01885818	GCA_000507645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/507/645/GCA_000507645.1_Esch_coli_HVH_177_4-2876612_V1	-	HVH 177 (4-2876612)
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.14673	39.7	-	CLTE01	53	2388	2172	3/21/15	3/4/17	Contig	SC	SAMEA1029009	GCA_001143745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/745/GCA_001143745.1_6972_4_3	-	SMRU2595
Pseudomonas aeruginosa	287	PRJNA369218	369218	Proteobacteria	Gammaproteobacteria	6.71803	66.1	-	MWLB01	277	6527	6257	3/6/17	3/9/17	Contig	Spanish National Centre for Biotechnology	SAMN06279745	GCA_002021645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/645/GCA_002021645.1_ASM202164v1	-	COPD6a
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.92803	38.9	-	LLCS01	90	3864	3633	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145623	GCA_001432785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/785/GCA_001432785.1_ASM143278v1	-	ABBL012
Klebsiella pneumoniae	573	PRJNA326665	326665	Proteobacteria	Gammaproteobacteria	5.57635	57.3	-	MAPL01	98	5660	5416	12/15/16	2/22/17	Contig	New Jersey Medical School-Rutgers University	SAMN05301549	GCA_001906645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/645/GCA_001906645.1_ASM190664v1	-	1492(2-C)
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.78577	64.2	-	FVXG01	14	4760	4632	3/10/17	3/18/17	Scaffold	SC	SAMEA2156037	GCA_900140885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/885/GCA_900140885.1_10702_1_51	-	636
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.23668	64.2	-	FVXI01	30	5248	5097	3/10/17	3/18/17	Scaffold	SC	SAMEA2163350	GCA_900140895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/895/GCA_900140895.1_10702_1_56	-	646
Klebsiella pneumoniae	573	PRJNA326665	326665	Proteobacteria	Gammaproteobacteria	5.57564	57.3	-	MAPM01	99	5655	5416	12/15/16	2/22/17	Contig	New Jersey Medical School-Rutgers University	SAMN05301548	GCA_001906685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/685/GCA_001906685.1_ASM190668v1	-	1491(2-B)
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.38348	39.8	-	LLCT01	1544	4049	3752	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145624	GCA_001432825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/825/GCA_001432825.1_ASM143282v1	-	ABBL013
Pseudomonas aeruginosa P49	1231933	PRJNA175104	175104	Proteobacteria	Gammaproteobacteria	6.23286	66.6	-	AMVQ01	145	5974	5756	3/13/17	3/15/17	Contig	University of Balearic Islands	SAMN06563816	GCA_002025515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/515/GCA_002025515.1_PaerP49_vs2.0	25329302	P49
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.22739	39.7	-	CLCD01	76	2471	2231	3/21/15	3/4/17	Contig	SC	SAMEA1026237	GCA_001143765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/765/GCA_001143765.1_6871_2_2	-	SMRU1826
Escherichia coli HVH 214 (4-3062198)	1281141	PRJNA186241	186241	Proteobacteria	Gammaproteobacteria	5.16904	50.6	-	AZJN01	9	5422	5067	12/12/13	2/23/17	Scaffold	Broad Institute	SAMN01885853	GCA_000507665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/507/665/GCA_000507665.1_Esch_coli_HVH_214_4-3062198_V1	-	HVH 214 (4-3062198)
Mycobacterium tuberculosis TKK_02_0062	1397880	PRJNA218252	218252	Terrabacteria group	Actinobacteria	4.42928	65.6	-	JLVC01	7	4296	4085	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350435	GCA_000672295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/295/GCA_000672295.1_Myco_tube_TKK_02_0062_V1	-	TKK_02_0062
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.86036	37.9	-	MKPL01	13	2897	2802	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277727	GCA_001761135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/135/GCA_001761135.1_BCW_3899	-	NRRL B-33804
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71931	52	-	CINW01	44	4874	4522	3/21/15	2/27/17	Contig	SC	SAMEA1971629	GCA_001081345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/345/GCA_001081345.1_10060_5_72	-	B1501
Staphylococcus aureus M1348	1403844	PRJNA221390	221390	Terrabacteria group	Firmicutes	2.916	32.8	-	JCZZ01	95	3092	2936	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02363983	GCA_000549545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/545/GCA_000549545.1_Stap_aure_M1348_V1	-	M1348
Staphylococcus aureus M1349	1403845	PRJNA221391	221391	Terrabacteria group	Firmicutes	2.91201	32.9	-	JDAA01	26	3066	2892	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02363984	GCA_000549565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/565/GCA_000549565.1_Stap_aure_M1349_V1	-	M1349
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93155	51.8	-	CITP01	56	5128	4750	3/21/15	2/27/17	Contig	SC	SAMEA2064346	GCA_001081365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/365/GCA_001081365.1_10071_8_72	-	2010K-0511
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.98262	37.8	-	MKPM01	23	3002	2934	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277728	GCA_001761165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/165/GCA_001761165.1_BCW_3900	-	NRRL B-33805
Mycobacterium tuberculosis TKK_02_0063	1397881	PRJNA218253	218253	Terrabacteria group	Actinobacteria	4.42219	65.5	-	JLVB01	6	4317	4116	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350436	GCA_000672315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/315/GCA_000672315.1_Myco_tube_TKK_02_0063_V1	-	TKK_02_0063
Escherichia coli UMEA 3489-1	1281250	PRJNA186353	186353	Proteobacteria	Gammaproteobacteria	4.93579	50.6	-	AZJO01	7	4998	4713	12/12/13	2/23/17	Scaffold	Broad Institute	SAMN01885962	GCA_000507685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/507/685/GCA_000507685.1_Esch_coli_UMEA_3489-1_V1	-	UMEA 3489-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08436	39.7	-	CNSU02	184	2285	2060	3/22/15	3/11/17	Contig	SC	SAMEA1032478	GCA_001143885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/885/GCA_001143885.2_6999_3_2	-	R34-3231
Pseudomonas aeruginosa P37	1231931	PRJNA175102	175102	Proteobacteria	Gammaproteobacteria	6.23792	66.6	-	AMVO01	148	5949	5752	3/13/17	3/15/17	Contig	University of Balearic Islands	SAMN06563818	GCA_002025525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/525/GCA_002025525.1_PaerP37_vs2.0	25329302	P37
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.93461	39.2	-	LLDG01	687	3875	3650	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145637	GCA_001432845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/845/GCA_001432845.1_ASM143284v1	-	ABBL026
Klebsiella pneumoniae	573	PRJNA326665	326665	Proteobacteria	Gammaproteobacteria	5.67035	57.2	-	MAOQ01	116	5764	5517	12/15/16	2/22/17	Contig	New Jersey Medical School-Rutgers University	SAMN05301545	GCA_001906705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/705/GCA_001906705.1_ASM190670v1	-	1446(1-B)
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.09894	64.1	-	FSPM01	15	5106	5000	12/14/16	3/21/17	Scaffold	SC	SAMEA2145213	GCA_900140905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/905/GCA_900140905.1_10702_1_53	-	638
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.10664	64.1	-	FSPQ01	29	5121	5015	12/14/16	3/21/17	Scaffold	SC	SAMEA2153867	GCA_900140935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/935/GCA_900140935.1_10702_1_60	-	654
Klebsiella pneumoniae	573	PRJNA326665	326665	Proteobacteria	Gammaproteobacteria	5.66808	57.2	-	MAPO01	117	5772	5520	12/15/16	2/22/17	Contig	New Jersey Medical School-Rutgers University	SAMN05301546	GCA_001906715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/715/GCA_001906715.1_ASM190671v1	-	1431(1-C)
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.92235	39	-	LLDJ01	102	3871	3635	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145640	GCA_001432895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/895/GCA_001432895.1_ASM143289v1	-	ABBL029
Pseudomonas aeruginosa P47	1231932	PRJNA175103	175103	Proteobacteria	Gammaproteobacteria	6.23637	66.6	-	AMVP01	112	5967	5762	3/13/17	3/15/17	Contig	University of Balearic Islands	SAMN06563817	GCA_002025555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/555/GCA_002025555.1_PaerP47_vs2.0	25329302	P47
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10214	39.5	-	CRIR01	44	2317	2095	3/23/15	3/10/17	Contig	SC	SAMEA1025176	GCA_001144125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/125/GCA_001144125.1_6753_1_15	-	SMRU1479
Escherichia coli E1777	1331061	PRJNA201654	201654	Proteobacteria	Gammaproteobacteria	5.11775	50.5	-	ASYQ02	150	5460	5077	6/25/13	2/22/17	Scaffold	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN02470025	GCA_000512625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/625/GCA_000512625.1_E1777_2	-	E1777
Mycobacterium tuberculosis TKK_02_0068	1397882	PRJNA218254	218254	Terrabacteria group	Actinobacteria	4.41192	65.4	-	JLVA01	27	4298	4105	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350437	GCA_000672335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/335/GCA_000672335.1_Myco_tube_TKK_02_0068_V1	-	TKK_02_0068
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.84187	37.9	-	MKPN01	12	2875	2792	10/12/16	3/2/17	Scaffold	University of California at Davis	SAMN03277729	GCA_001761175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/175/GCA_001761175.1_BCW_3901	-	NRRL B-33806
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72018	52	-	CINA01	44	4878	4521	3/21/15	3/2/17	Contig	SC	SAMEA2058809	GCA_001081385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/385/GCA_001081385.1_10060_5_57	-	100949
Staphylococcus aureus M1350	1403846	PRJNA221392	221392	Terrabacteria group	Firmicutes	2.88071	32.9	-	JDAB01	22	3022	2861	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02363985	GCA_000549585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/585/GCA_000549585.1_Stap_aure_M1350_V1	-	M1350
Staphylococcus aureus M1351	1403847	PRJNA221393	221393	Terrabacteria group	Firmicutes	2.87552	32.7	-	JDAC01	69	3030	2888	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02363986	GCA_000549605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/605/GCA_000549605.1_Stap_aure_M1351_V1	-	M1351
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73802	52.1	-	CIRT01	40	4911	4552	3/21/15	2/27/17	Contig	SC	SAMEA1973193	GCA_001081445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/445/GCA_001081445.1_10071_3_9	-	TY063
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.9311	37.9	-	MKPO01	14	2983	2907	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277730	GCA_001761205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/205/GCA_001761205.1_BCW_3902	-	NRRL B-33809
Mycobacterium tuberculosis TKK_02_0069	1397883	PRJNA218255	218255	Terrabacteria group	Actinobacteria	4.42516	65.6	-	JLUZ01	8	4304	4132	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350438	GCA_000672355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/355/GCA_000672355.1_Myco_tube_TKK_02_0069_V1	-	TKK_02_0069
Escherichia coli str. K-12 substr. MG1655	511145	PRJNA85565	85565	Proteobacteria	Gammaproteobacteria	4.55647	50.7	-	AJGD01	79	4709	4440	1/7/14	2/22/17	Scaffold	The Genome Institute	SAMN02597472	GCA_000517165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/165/GCA_000517165.1_ASM51716v1	-	K-12 substr. MG1655
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05234	39.6	-	CNUI02	134	2241	2041	3/23/15	3/5/17	Contig	SC	SAMEA1032674	GCA_001144205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/205/GCA_001144205.2_6999_5_3	-	151684
Pseudomonas aeruginosa SD9	1231930	PRJNA175101	175101	Proteobacteria	Gammaproteobacteria	6.30199	66.6	-	AMVN01	161	6041	5784	3/13/17	3/15/17	Contig	University of Balearic Islands	SAMN06563819	GCA_002025565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/565/GCA_002025565.1_PaerSD9_vs2.0	25329302	SD9
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.04613	38.9	-	LLDK01	199	3940	3704	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145641	GCA_001432925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/925/GCA_001432925.1_ASM143292v1	-	ABBL030
Klebsiella pneumoniae	573	PRJNA326665	326665	Proteobacteria	Gammaproteobacteria	5.60871	57.2	-	MAOR01	114	5685	5442	12/15/16	2/22/17	Contig	New Jersey Medical School-Rutgers University	SAMN05301544	GCA_001906725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/725/GCA_001906725.1_ASM190672v1	-	1421(1-A)
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.12608	64.1	-	FVXK01	62	5184	4981	3/10/17	3/18/17	Scaffold	SC	SAMEA2150209	GCA_900140945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/945/GCA_900140945.1_10702_1_59	-	652
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.446	64	-	FSPP01	55	5599	5405	12/14/16	3/21/17	Scaffold	SC	SAMEA2158960	GCA_900140955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/955/GCA_900140955.1_10702_1_58	-	650
Klebsiella pneumoniae	573	PRJNA357080	357080	Proteobacteria	Gammaproteobacteria	5.31134	57.4	-	MRWC01	20	5297	5062	12/18/16	2/22/17	Contig	University of Sao Paulo	SAMN06132264	GCA_001907955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/955/GCA_001907955.1_ASM190795v1	-	301
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.88726	39.5	-	LLDP01	1193	3809	3555	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145646	GCA_001432965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/965/GCA_001432965.1_ASM143296v1	-	ABBL035
Pseudomonas aeruginosa	287	PRJNA378853	378853	Proteobacteria	Gammaproteobacteria	7.01929	65.9	-	MZND01	606	6790	6397	3/16/17	3/18/17	Contig	University of Sao Paulo	SAMN06562970	GCA_002029925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/925/GCA_002029925.1_ASM202992v1	-	ICBDVIM-2
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05321	39.5	-	CNYM02	145	2250	2036	3/23/15	3/5/17	Contig	SC	SAMEA1463239	GCA_001144265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/265/GCA_001144265.2_7553_4_32	-	NP7013
Escherichia coli BIDMC 43b	1400157	PRJNA219250	219250	Proteobacteria	Gammaproteobacteria	5.40076	50.3	-	JAPE01	8	5508	5148	1/23/14	2/23/17	Scaffold	Broad Institute	SAMN02356582	GCA_000522085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/085/GCA_000522085.1_Esch_coli_BIDMC_43b_V1	-	BIDMC 43b
Mycobacterium tuberculosis TKK_02_0070	1397884	PRJNA218256	218256	Terrabacteria group	Actinobacteria	4.40336	65.6	-	JLUY01	5	4301	4102	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350439	GCA_000672375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/375/GCA_000672375.1_Myco_tube_TKK_02_0070_V1	-	TKK_02_0070
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.86864	37.9	-	MKPP01	15	2893	2825	10/12/16	3/2/17	Scaffold	University of California at Davis	SAMN03277731	GCA_001761225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/225/GCA_001761225.1_BCW_3903	-	NRRL B-33811
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.75909	52.1	-	CINI01	42	4924	4564	3/21/15	2/27/17	Contig	SC	SAMEA2058631	GCA_001081465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/465/GCA_001081465.1_10060_5_45	-	A256
Staphylococcus aureus M1352	1403848	PRJNA221394	221394	Terrabacteria group	Firmicutes	2.82943	32.8	-	JDAD01	16	2938	2773	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02363987	GCA_000549625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/625/GCA_000549625.1_Stap_aure_M1352_V1	-	M1352
Staphylococcus aureus M1353	1403849	PRJNA221395	221395	Terrabacteria group	Firmicutes	2.89042	32.8	-	JDAE01	64	3007	2850	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02363988	GCA_000549645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/645/GCA_000549645.1_Stap_aure_M1353_V1	-	M1353
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69907	52.1	-	CIOY01	41	4845	4502	3/21/15	2/27/17	Contig	SC	SAMEA2055258	GCA_001081485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/485/GCA_001081485.1_10060_6_44	-	UI3753
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.03536	37.8	-	MKPQ01	37	3086	2995	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277732	GCA_001761245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/245/GCA_001761245.1_BCW_3904	-	NRRL B-33812
Mycobacterium tuberculosis TKK_02_0071	1397885	PRJNA218257	218257	Terrabacteria group	Actinobacteria	4.39799	65.6	-	JLUX01	1	4275	4111	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350440	GCA_000672395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/395/GCA_000672395.1_Myco_tube_TKK_02_0071_V1	-	TKK_02_0071
Escherichia coli BIDMC 43a	1400156	PRJNA219249	219249	Proteobacteria	Gammaproteobacteria	5.391	50.4	-	JAPF01	9	5534	5183	1/23/14	2/22/17	Scaffold	Broad Institute	SAMN02356581	GCA_000522105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/105/GCA_000522105.1_Esch_coli_BIDMC_43a_V1	-	BIDMC 43a
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.0817	39.5	-	CLFV01	70	2311	2077	3/21/15	3/10/17	Contig	SC	SAMEA1025777	GCA_001144385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/385/GCA_001144385.1_6925_3_20	-	SMRU2132
Pseudomonas aeruginosa	287	PRJNA348792	348792	Proteobacteria	Gammaproteobacteria	5.5031	66.6	-	MWZH01	353	5315	4980	4/12/17	4/16/17	Contig	UQCCR	SAMN05915702	GCA_002088135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/135/GCA_002088135.1_ASM208813v1	-	UQCCR 576652281 AC25
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.18133	39	-	LLDR01	81	4121	3862	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145648	GCA_001432975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/975/GCA_001432975.1_ASM143297v1	-	ABBL037
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA357060	357060	Proteobacteria	Gammaproteobacteria	5.56155	57.2	-	MSAK01	66	5585	5306	1/3/17	2/22/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN06131829	GCA_001929345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/929/345/GCA_001929345.1_ASM192934v1	-	ATCC 9621
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.10429	64.1	-	FVXJ01	20	5113	5009	3/10/17	3/18/17	Scaffold	SC	SAMEA2155457	GCA_900140965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/965/GCA_900140965.1_10702_1_61	-	655
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96653	64.1	-	FSPR01	18	4955	4830	12/14/16	3/21/17	Scaffold	SC	SAMEA2145083	GCA_900140975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/975/GCA_900140975.1_10702_1_62	-	657
Klebsiella pneumoniae	573	PRJNA354234	354234	Proteobacteria	Gammaproteobacteria	5.427	57.2	-	MPSJ01	76	5471	5258	1/4/17	2/21/17	Contig	New Jersey Medical School-Rutgers University	SAMN06043599	GCA_001931705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/705/GCA_001931705.1_ASM193170v1	-	38_wz
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.04527	38.8	-	LLDS01	92	3981	3732	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145649	GCA_001433005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/005/GCA_001433005.1_ASM143300v1	-	ABBL038
Pseudomonas aeruginosa	287	PRJNA348795	348795	Proteobacteria	Gammaproteobacteria	6.58048	66.2	-	MWZF01	400	6463	6027	4/12/17	4/16/17	Contig	UQCCR	SAMN05915705	GCA_002088145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/145/GCA_002088145.1_ASM208814v1	-	UQCCR 35166-1996 AC02
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05531	39.6	-	CNSY02	137	2209	2012	3/23/15	3/11/17	Contig	SC	SAMEA1032698	GCA_001144425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/425/GCA_001144425.2_6999_3_23	-	72782
Escherichia coli BIDMC 20B	1328447	PRJNA202031	202031	Proteobacteria	Gammaproteobacteria	5.35096	50.7	-	JAPG01	5	5588	5243	1/23/14	2/22/17	Scaffold	Broad Institute	SAMN02138650	GCA_000522125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/125/GCA_000522125.1_Esch_coli_BIDMC_20B_V1	-	BIDMC 20B
Mycobacterium tuberculosis TKK_02_0073	1397886	PRJNA218258	218258	Terrabacteria group	Actinobacteria	4.42978	65.5	-	JLUW01	30	4312	4125	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350441	GCA_000672415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/415/GCA_000672415.1_Myco_tube_TKK_02_0073_V1	-	TKK_02_0073
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.83071	37.9	-	MKPR01	14	2839	2770	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277733	GCA_001761255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/255/GCA_001761255.1_BCW_3905	-	NRRL B-33816
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93193	51.8	-	CIOZ01	66	5126	4743	3/21/15	3/2/17	Contig	SC	SAMEA2056704	GCA_001081505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/505/GCA_001081505.1_10060_6_39	-	UI3492
Staphylococcus aureus M1354	1403850	PRJNA221396	221396	Terrabacteria group	Firmicutes	2.85889	32.9	-	JDAF01	33	2973	2846	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02363989	GCA_000549665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/665/GCA_000549665.1_Stap_aure_M1354_V1	-	M1354
Staphylococcus aureus M1355	1403851	PRJNA221397	221397	Terrabacteria group	Firmicutes	2.88646	32.8	-	JDAG01	49	3067	2899	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02363990	GCA_000549685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/685/GCA_000549685.1_Stap_aure_M1355_V1	-	M1355
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72373	52	-	CITT01	41	4879	4519	3/21/15	2/27/17	Contig	SC	SAMEA2067643	GCA_001081545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/545/GCA_001081545.1_10071_8_62	-	2010K-0515
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.87838	37.9	-	MKPS01	17	2909	2831	10/12/16	3/1/17	Scaffold	University of California at Davis	SAMN03277734	GCA_001761285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/761/285/GCA_001761285.1_BCW_3906	-	NRRL B-33820
Mycobacterium tuberculosis TKK_02_0077	1397887	PRJNA218259	218259	Terrabacteria group	Actinobacteria	4.41162	65.6	-	JLUV01	3	4296	4115	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350442	GCA_000672435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/435/GCA_000672435.1_Myco_tube_TKK_02_0077_V1	-	TKK_02_0077
Escherichia coli BIDMC 20A	1328446	PRJNA202030	202030	Proteobacteria	Gammaproteobacteria	5.37328	50.7	-	JAPH01	7	5591	5234	1/23/14	2/23/17	Scaffold	Broad Institute	SAMN02138649	GCA_000522145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/145/GCA_000522145.1_Esch_coli_BIDMC_20A_V2	-	BIDMC 20A
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12419	39.7	-	CMSJ01	66	2312	2042	3/23/15	3/10/17	Contig	SC	SAMEA2062391	GCA_001144525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/525/GCA_001144525.1_9803_8_68	-	type strain: N
Pseudomonas aeruginosa	287	PRJNA348799	348799	Proteobacteria	Gammaproteobacteria	5.28706	66.4	-	MWZG02	287	5188	4844	4/12/17	6/26/17	Contig	UQCCR	SAMN05915710	GCA_002088165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/165/GCA_002088165.2_ASM208816v2	-	UQCCR 462667354 AA24
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.12608	38.9	-	LLDY01	178	4089	3837	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145655	GCA_001433015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/015/GCA_001433015.1_ASM143301v1	-	ABBL044
Klebsiella pneumoniae	573	PRJNA348399	348399	Proteobacteria	Gammaproteobacteria	5.63562	57	-	MLQP01	83	5703	5428	1/6/17	2/22/17	Contig	LAU	SAMN05908144	GCA_001938035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/035/GCA_001938035.1_ASM193803v1	-	KLEB-LEB
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.77848	64.2	-	FSPS01	16	4718	4618	12/14/16	3/21/17	Scaffold	SC	SAMEA2159217	GCA_900140985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/985/GCA_900140985.1_10702_1_63	-	658
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.82785	64	-	FSPT01	37	6065	5873	12/14/16	3/21/17	Scaffold	SC	SAMEA2149858	GCA_900140995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/995/GCA_900140995.1_10702_1_64	-	660
Klebsiella pneumoniae	573	PRJNA349219	349219	Proteobacteria	Gammaproteobacteria	5.73542	57	-	MNAJ01	52	5682	5406	1/9/17	2/22/17	Contig	Fifth Affiliated Hospital of Wenzhou Medical University	SAMN05928591	GCA_001939855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/855/GCA_001939855.1_ASM193985v1	27965935	GN-3
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.18048	38.9	-	LLEE01	314	4093	3872	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145661	GCA_001433055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/055/GCA_001433055.1_ASM143305v1	-	ABBL050
Pseudomonas aeruginosa	287	PRJNA374404	374404	Proteobacteria	Gammaproteobacteria	7.09742	65.9	-	MWWM01	183	6939	6681	4/12/17	4/16/17	Contig	UQCCR	SAMN06323304	GCA_002088215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/215/GCA_002088215.1_ASM208821v1	-	UQCCR 393788042 K AB94
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1148	39.6	-	CLVV01	67	2332	2113	3/21/15	3/10/17	Contig	SC	SAMEA1026182	GCA_001144725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/725/GCA_001144725.1_6983_4_78	-	SMRU2286
Escherichia coli BIDMC 19B	1328444	PRJNA202028	202028	Proteobacteria	Gammaproteobacteria	5.50111	50.4	-	JAPI01	9	5665	5315	1/23/14	2/23/17	Scaffold	Broad Institute	SAMN02138647	GCA_000522165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/165/GCA_000522165.1_Esch_coli_BIDMC_19B_V2	-	BIDMC 19B
Mycobacterium tuberculosis TKK_02_0067	1397888	PRJNA218260	218260	Terrabacteria group	Actinobacteria	4.42286	65.5	-	JLUU01	5	4297	4123	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350443	GCA_000672455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/455/GCA_000672455.1_Myco_tube_TKK_02_0067_V1	-	TKK_02_0067
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.00395	37.9	-	MJND01	25	3066	2967	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358732	GCA_001817895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/817/895/GCA_001817895.1_ASM181789v1	-	BCW_2996
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.80695	52	-	CIPS01	46	5015	4639	3/21/15	3/2/17	Contig	SC	SAMEA2059693	GCA_001081565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/565/GCA_001081565.1_10060_6_85	-	H062640481
Staphylococcus aureus M1356	1403852	PRJNA221398	221398	Terrabacteria group	Firmicutes	2.8957	32.8	-	JDAH01	45	3012	2869	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02363991	GCA_000549705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/705/GCA_000549705.1_Stap_aure_M1356_V1	-	M1356
Staphylococcus aureus M1360	1403855	PRJNA221401	221401	Terrabacteria group	Firmicutes	2.89698	32.9	-	JDAI01	79	3077	2885	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02363994	GCA_000549725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/725/GCA_000549725.1_Stap_aure_M1360_V1	-	M1360
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71996	52	-	CISN01	41	4868	4520	3/21/15	3/2/17	Contig	SC	SAMEA2064156	GCA_001081585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/585/GCA_001081585.1_10071_8_33	-	Gen-0033
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.85756	37.4	-	MJNE01	17	2910	2792	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358733	GCA_001825735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/735/GCA_001825735.1_ASM182573v1	-	BCW_2997
Mycobacterium tuberculosis TKK_03_0018	1397889	PRJNA218261	218261	Terrabacteria group	Actinobacteria	4.45011	65.5	-	JLUT01	13	4327	4144	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350444	GCA_000672475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/475/GCA_000672475.1_Myco_tube_TKK_03_0018_V1	-	TKK_03_0018
Escherichia coli BIDMC 19A	1328443	PRJNA202027	202027	Proteobacteria	Gammaproteobacteria	5.48288	50.4	-	JAPJ01	8	5648	5291	1/23/14	2/22/17	Scaffold	Broad Institute	SAMN02138646	GCA_000522185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/185/GCA_000522185.1_Esch_coli_BIDMC_19A_V2	-	BIDMC 19A
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.01497	39.6	-	CQVK01	27	2214	1985	3/22/15	3/11/17	Contig	SC	SAMEA1025428	GCA_001144765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/765/GCA_001144765.1_6710_7_5	-	SMRU1373
Pseudomonas aeruginosa	287	PRJNA374402	374402	Proteobacteria	Gammaproteobacteria	6.61829	66.1	-	MWWL01	348	6426	6054	4/12/17	4/16/17	Contig	UQCCR	SAMN06323302	GCA_002088225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/225/GCA_002088225.1_ASM208822v1	-	UQCCR 364724162 AA73
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.72853	39.5	-	LLDI01	1096	3714	3439	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145639	GCA_001433075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/075/GCA_001433075.1_ASM143307v1	-	ABBL028
Klebsiella pneumoniae	573	PRJNA353361	353361	Proteobacteria	Gammaproteobacteria	5.40637	57.4	-	MPJA01	99	5425	5142	1/11/17	2/22/17	Contig	New Jersey Medical School-Rutgers University	SAMN06014567	GCA_001945475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/475/GCA_001945475.1_ASM194547v1	-	97_58
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96566	64.1	-	FSPU01	27	4913	4777	12/14/16	3/21/17	Scaffold	SC	SAMEA2158283	GCA_900141005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/005/GCA_900141005.1_10702_1_65	-	661
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.96429	64.2	-	FVXM01	20	4969	4850	3/10/17	3/18/17	Scaffold	SC	SAMEA2159498	GCA_900141015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/015/GCA_900141015.1_10702_1_67	-	666
Klebsiella pneumoniae	573	PRJDB5371	357708	Proteobacteria	Gammaproteobacteria	5.42711	57.2	-	BDLF01	86	5379	5152	12/15/16	2/22/17	Contig	"National Institute of Infectious Diseases, Japan"	SAMD00069266	GCA_001950635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/635/GCA_001950635.1_ASM195063v1	-	MRY10-808
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.04629	38.9	-	LLDO01	107	4024	3779	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145645	GCA_001433145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/145/GCA_001433145.1_ASM143314v1	-	ABBL034
Pseudomonas aeruginosa	287	PRJNA381838	381838	Proteobacteria	Gammaproteobacteria	6.83205	66.1	-	NDFS01	97	6626	6394	5/12/17	5/23/17	Contig	Nanyang Technological University	SAMN06689799	GCA_002134835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/835/GCA_002134835.1_ASM213483v1	-	PASGNDM583
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09777	39.7	-	CRSX01	50	2347	2113	3/23/15	3/10/17	Contig	SC	SAMEA1025370	GCA_001144785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/785/GCA_001144785.1_6805_3_4	-	SMRU1444
Escherichia coli BIDMC 17B	1328442	PRJNA202022	202022	Proteobacteria	Gammaproteobacteria	5.50952	50.4	-	JAPK01	8	5687	5330	1/23/14	2/23/17	Scaffold	Broad Institute	SAMN02138641	GCA_000522205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/205/GCA_000522205.1_Esch_coli_BIDMC_17B_V2	-	BIDMC 17B
Mycobacterium tuberculosis TKK_03_0020	1397890	PRJNA218262	218262	Terrabacteria group	Actinobacteria	4.41721	65.6	-	JLUS01	5	4299	4124	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350445	GCA_000672495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/495/GCA_000672495.1_Myco_tube_TKK_03_0020_V1	-	TKK_03_0020
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.92822	37.9	-	MJNF01	17	2967	2884	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03359259	GCA_001825745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/745/GCA_001825745.1_ASM182574v1	-	BCW_3907
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72088	52	-	CIRV01	43	4882	4524	3/21/15	2/27/17	Contig	SC	SAMEA2066178	GCA_001081605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/605/GCA_001081605.1_10071_8_19	-	Gen-0019
Staphylococcus aureus M1361	1403856	PRJNA221402	221402	Terrabacteria group	Firmicutes	2.86843	32.9	-	JDAJ01	54	3031	2867	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02363995	GCA_000549745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/745/GCA_000549745.1_Stap_aure_M1361_V1	-	M1361
Staphylococcus aureus M1363	1403858	PRJNA221404	221404	Terrabacteria group	Firmicutes	2.89348	32.8	-	JDAK01	14	3034	2871	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02363997	GCA_000549765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/765/GCA_000549765.1_Stap_aure_M1363_V1	-	M1363
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72105	52	-	CISP01	41	4869	4516	3/21/15	2/27/17	Contig	SC	SAMEA2067634	GCA_001081625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/625/GCA_001081625.1_10071_8_35	-	Gen-0035
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.06399	37.9	-	MJNG01	24	3093	3009	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03359260	GCA_001825765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/765/GCA_001825765.1_ASM182576v1	-	BCW_3908
Mycobacterium tuberculosis TKK_03_0022	1397891	PRJNA218263	218263	Terrabacteria group	Actinobacteria	4.41658	65	-	JLUR01	45	4333	4069	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350446	GCA_000672515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/515/GCA_000672515.1_Myco_tube_TKK_03_0022_V1	-	TKK_03_0022
Escherichia coli BIDMC 17A	1328441	PRJNA202021	202021	Proteobacteria	Gammaproteobacteria	5.51081	50.4	-	JAPL01	14	5693	5332	1/23/14	2/23/17	Scaffold	Broad Institute	SAMN02138640	GCA_000522225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/225/GCA_000522225.1_Esch_coli_BIDMC_17A_V2	-	BIDMC 17A
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.1172	39.4	-	CLTK01	67	2309	2079	3/21/15	3/10/17	Contig	SC	SAMEA1028788	GCA_001144825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/825/GCA_001144825.1_6972_5_1	-	SMRU2617
Pseudomonas aeruginosa	287	PRJNA381838	381838	Proteobacteria	Gammaproteobacteria	6.83532	66.1	-	NDFR01	89	6623	6404	5/12/17	5/23/17	Contig	Nanyang Technological University	SAMN06689798	GCA_002134845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/845/GCA_002134845.1_ASM213484v1	-	PASGNDM571
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.84407	39.2	-	LLDQ01	579	3802	3448	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145647	GCA_001433155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/155/GCA_001433155.1_ASM143315v1	-	ABBL036
Klebsiella pneumoniae	573	PRJDB5371	357708	Proteobacteria	Gammaproteobacteria	5.53925	57	-	BDLG01	160	5526	5298	12/15/16	2/22/17	Contig	"National Institute of Infectious Diseases, Japan"	SAMD00069267	GCA_001950655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/655/GCA_001950655.1_ASM195065v1	-	MRY10-848
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.24357	64.1	-	FSPV01	54	5261	5112	12/14/16	3/21/17	Scaffold	SC	SAMEA2156525	GCA_900141035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/035/GCA_900141035.1_10702_1_68	-	671
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.2375	64.2	-	FVXN01	31	5249	5097	3/10/17	3/18/17	Scaffold	SC	SAMEA2153559	GCA_900141065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/065/GCA_900141065.1_10702_1_70	-	673
Klebsiella pneumoniae	573	PRJDB5371	357708	Proteobacteria	Gammaproteobacteria	5.5491	57.2	-	BDLH01	188	5514	5263	12/15/16	2/22/17	Contig	"National Institute of Infectious Diseases, Japan"	SAMD00069268	GCA_001950675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/675/GCA_001950675.1_ASM195067v1	-	MRY10-897
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.05408	39	-	LLDZ01	108	4073	3843	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145656	GCA_001433205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/205/GCA_001433205.1_ASM143320v1	-	ABBL045
Pseudomonas aeruginosa	287	PRJNA381838	381838	Proteobacteria	Gammaproteobacteria	6.83558	66.1	-	NDFQ01	111	6642	6393	5/12/17	5/23/17	Contig	Nanyang Technological University	SAMN06689797	GCA_002134885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/885/GCA_002134885.1_ASM213488v1	-	PASGNDM544
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08027	39.5	-	CKZH01	59	2259	2033	3/21/15	3/10/17	Contig	SC	SAMEA1025973	GCA_001144845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/845/GCA_001144845.1_6840_1_14	-	SMRU1766
Escherichia coli BIDMC 15	1328440	PRJNA202019	202019	Proteobacteria	Gammaproteobacteria	5.48814	50.3	-	JAPM01	14	5615	5273	1/23/14	2/23/17	Scaffold	Broad Institute	SAMN02138638	GCA_000522245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/245/GCA_000522245.1_Esch_coli_BIDMC_15_V2	-	BIDMC 15
Mycobacterium tuberculosis TKK_03_0025	1397892	PRJNA218264	218264	Terrabacteria group	Actinobacteria	4.45366	65.1	-	JLUQ01	5	4312	4093	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350447	GCA_000672535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/535/GCA_000672535.1_Myco_tube_TKK_03_0025_V1	-	TKK_03_0025
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.75815	37.9	-	MJNI01	17	2798	2710	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03359262	GCA_001825815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/815/GCA_001825815.1_ASM182581v1	-	BCW_3910
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.85152	52	-	CIQA01	58	5051	4671	3/21/15	2/27/17	Contig	SC	SAMEA2056956	GCA_001081645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/645/GCA_001081645.1_10071_3_14	-	TY132
Staphylococcus aureus M1365	1403859	PRJNA221405	221405	Terrabacteria group	Firmicutes	2.84103	32.8	-	JDAL01	54	3025	2849	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02363998	GCA_000549785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/785/GCA_000549785.1_Stap_aure_M1365_V1	-	M1365
Staphylococcus aureus M1476	1403861	PRJNA221407	221407	Terrabacteria group	Firmicutes	2.90531	32.9	-	JDAM01	66	3045	2872	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02364000	GCA_000549805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/805/GCA_000549805.1_Stap_aure_M1476_V1	-	M1476
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69888	52.1	-	CIPD01	38	4859	4508	3/21/15	3/2/17	Contig	SC	SAMEA2057376	GCA_001081665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/665/GCA_001081665.1_10060_6_5	-	ST716
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.9266	37.9	-	MJNJ01	18	2938	2870	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03359263	GCA_001825825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/825/GCA_001825825.1_ASM182582v1	-	BCW_3911
Mycobacterium tuberculosis TKK_03_0026	1397893	PRJNA218265	218265	Terrabacteria group	Actinobacteria	4.42198	65.6	-	JLUP01	4	4303	4115	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350448	GCA_000672555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/555/GCA_000672555.1_Myco_tube_TKK_03_0026_V1	-	TKK_03_0026
Escherichia coli BIDMC 9	1328439	PRJNA202011	202011	Proteobacteria	Gammaproteobacteria	5.4578	50.3	-	JAPN01	18	5609	5265	1/23/14	2/23/17	Scaffold	Broad Institute	SAMN02138630	GCA_000522265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/265/GCA_000522265.1_Esch_coli_BIDMC_9_V2	-	BIDMC 9
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.04205	39.5	-	CRNV01	77	2231	2022	3/22/15	3/10/17	Contig	SC	SAMEA1025034	GCA_001144925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/925/GCA_001144925.1_6755_4_9	-	SMRU1137
Pseudomonas aeruginosa	287	PRJNA381838	381838	Proteobacteria	Gammaproteobacteria	6.78663	66.1	-	NDFV01	108	6588	6358	5/12/17	5/23/17	Contig	Nanyang Technological University	SAMN06689801	GCA_002134895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/895/GCA_002134895.1_ASM213489v1	-	PASGNDM587
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.15627	38.9	-	LLED01	145	4074	3844	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145660	GCA_001433245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/245/GCA_001433245.1_ASM143324v1	-	ABBL049
Klebsiella pneumoniae	573	PRJNA335581	335581	Proteobacteria	Gammaproteobacteria	5.69266	56.9	-	MCNI01	98	5767	5476	2/5/17	2/22/17	Contig	CVI of Wageningen University	SAMN05449123	GCA_001984895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/895/GCA_001984895.1_ASM198489v1	-	KP41-2015
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.00393	64.2	-	FSPX01	38	5008	4864	12/14/16	3/21/17	Scaffold	SC	SAMEA2150369	GCA_900141075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/075/GCA_900141075.1_10702_1_72	-	678
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18705	64.2	-	FSQA01	23	5225	5109	12/14/16	3/21/17	Scaffold	SC	SAMEA2156992	GCA_900141095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/095/GCA_900141095.1_10702_1_76	-	685
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA376447	376447	Proteobacteria	Gammaproteobacteria	5.69191	56.7667	plasmid pKpvST147L:NZ_CM007852.1/CM007852.1	MZMY01	112	5720	5448	4/12/17	4/17/17	Contig	Public Health England	SAMN06392936	GCA_002087215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/215/GCA_002087215.1_ASM208721v1	-	KpvST147L_NDM
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.01263	39	-	LLDV01	108	3984	3727	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145652	GCA_001433265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/265/GCA_001433265.1_ASM143326v1	-	ABBL041
Pseudomonas aeruginosa	287	PRJNA381838	381838	Proteobacteria	Gammaproteobacteria	6.82665	66.1	-	NDFX01	87	6606	6394	5/12/17	5/23/17	Contig	Nanyang Technological University	SAMN06689827	GCA_002134905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/905/GCA_002134905.1_ASM213490v1	-	PASGNDM592
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04177	39.6	-	CNWC02	171	2229	2009	3/23/15	3/11/17	Contig	SC	SAMEA1032625	GCA_001144965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/965/GCA_001144965.2_7001_1_16	-	R34-3093
Escherichia coli BIDMC 3	1328437	PRJNA202004	202004	Proteobacteria	Gammaproteobacteria	5.48484	50.4	-	JAPP01	14	5678	5332	1/23/14	2/23/17	Scaffold	Broad Institute	SAMN02138623	GCA_000522285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/285/GCA_000522285.1_Esch_coli_BIDMC_3_V2	-	BIDMC 3
Mycobacterium tuberculosis TKK_03_0027	1397894	PRJNA218266	218266	Terrabacteria group	Actinobacteria	4.39996	65.6	-	JLUO01	3	4291	4096	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350449	GCA_000672575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/575/GCA_000672575.1_Myco_tube_TKK_03_0027_V1	-	TKK_03_0027
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.85283	37.9	-	MJNK01	15	2873	2809	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03359264	GCA_001825855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/855/GCA_001825855.1_ASM182585v1	-	BCW_3912
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93393	51.8	-	CIUD01	50	5132	4748	3/21/15	2/27/17	Contig	SC	SAMEA2067728	GCA_001081685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/685/GCA_001081685.1_10071_8_83	-	2010K-0508
Staphylococcus aureus M1477	1403862	PRJNA221408	221408	Terrabacteria group	Firmicutes	2.87696	32.9	-	JDAN01	40	3049	2876	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02364001	GCA_000549825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/825/GCA_000549825.1_Stap_aure_M1477_V1	-	M1477
Staphylococcus aureus M1478	1403863	PRJNA221409	221409	Terrabacteria group	Firmicutes	2.85861	32.9	-	JDAO01	54	3012	2826	2/4/14	3/2/17	Scaffold	Broad Institute	SAMN02364002	GCA_000549845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/845/GCA_000549845.1_Stap_aure_M1478_V1	-	M1478
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72376	52	-	CITM01	43	4878	4516	3/21/15	2/27/17	Contig	SC	SAMEA2066340	GCA_001081725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/725/GCA_001081725.1_10071_8_64	-	2010K-0527
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.87568	37.9	-	MJNL01	17	2913	2854	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03359265	GCA_001825865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/865/GCA_001825865.1_ASM182586v1	-	BCW_3913
Mycobacterium tuberculosis TKK_03_0029	1397895	PRJNA218267	218267	Terrabacteria group	Actinobacteria	4.42874	65.4	-	JLUN01	5	4311	4106	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350450	GCA_000672595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/595/GCA_000672595.1_Myco_tube_TKK_03_0029_V1	-	TKK_03_0029
Escherichia coli BIDMC 2B	1328436	PRJNA202003	202003	Proteobacteria	Gammaproteobacteria	5.5088	50.4	-	JAPQ01	8	5682	5329	1/23/14	2/23/17	Scaffold	Broad Institute	SAMN02138622	GCA_000522305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/305/GCA_000522305.1_Esch_coli_BIDMC_2B_V2	-	BIDMC 2B
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.0601	39.8	-	CMRL01	77	2309	2060	3/22/15	3/10/17	Contig	SC	SAMEA2062169	GCA_001144985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/985/GCA_001144985.1_9803_8_41	-	17F
Pseudomonas aeruginosa	287	PRJNA381838	381838	Proteobacteria	Gammaproteobacteria	6.76596	66.1	-	NDFT01	101	6576	6338	5/12/17	5/23/17	Contig	Nanyang Technological University	SAMN06689800	GCA_002134915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/915/GCA_002134915.1_ASM213491v1	-	PASGNDM586
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.20252	38.9	-	LLDX01	149	4162	3908	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145654	GCA_001433275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/275/GCA_001433275.1_ASM143327v1	-	ABBL043
Klebsiella pneumoniae	573	PRJNA377546	377546	Proteobacteria	Gammaproteobacteria	5.53584	57.2	-	MZZQ01	232	5639	5328	4/21/17	4/24/17	Contig	University of Sao Paulo	SAMN06461936	GCA_002104175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/175/GCA_002104175.1_ASM210417v1	-	1714
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15977	64.2	-	FSPY01	41	5170	5016	12/14/16	3/21/17	Scaffold	SC	SAMEA2155391	GCA_900141105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/105/GCA_900141105.1_10702_1_73	-	680
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.10497	64.2	-	FSQB01	22	5108	5003	12/14/16	3/21/17	Scaffold	SC	SAMEA2142639	GCA_900141115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/115/GCA_900141115.1_10702_1_77	-	689
Klebsiella pneumoniae	573	PRJNA377546	377546	Proteobacteria	Gammaproteobacteria	5.75793	57	-	MZZS01	263	5971	5634	4/21/17	4/24/17	Contig	University of Sao Paulo	SAMN06461938	GCA_002104185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/185/GCA_002104185.1_ASM210418v1	-	4490
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.10628	38.8	-	LLEG01	107	4104	3799	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145663	GCA_001433335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/335/GCA_001433335.1_ASM143333v1	-	ABBL052
Pseudomonas aeruginosa	287	PRJNA381838	381838	Proteobacteria	Gammaproteobacteria	6.76949	66.1	-	NDFW01	119	6586	6336	5/12/17	5/23/17	Contig	Nanyang Technological University	SAMN06689803	GCA_002134965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/965/GCA_002134965.1_ASM213496v1	-	PASGNDM591
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.20764	39.7	-	CMRE01	84	2447	2199	3/23/15	3/10/17	Contig	SC	SAMEA2061743	GCA_001145005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/005/GCA_001145005.1_9803_8_34	-	6B
Escherichia coli BWH 40	1328434	PRJNA201977	201977	Proteobacteria	Gammaproteobacteria	5.3209	50.7	-	JAPR01	5	5513	5114	1/23/14	2/23/17	Scaffold	Broad Institute	SAMN02138602	GCA_000522325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/325/GCA_000522325.1_Esch_coli_BWH_40_V1	-	BWH 40
Mycobacterium tuberculosis TKK_03_0030	1397896	PRJNA218268	218268	Terrabacteria group	Actinobacteria	4.43037	65.6	-	JLUM01	4	4288	4116	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350451	GCA_000672615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/615/GCA_000672615.1_Myco_tube_TKK_03_0030_V1	-	TKK_03_0030
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.92102	37.8	-	MJNM01	23	2964	2877	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03359266	GCA_001825895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/895/GCA_001825895.1_ASM182589v1	-	BCW_3914
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71959	52	-	CISI01	38	4872	4515	3/21/15	3/2/17	Contig	SC	SAMEA2067632	GCA_001081785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/785/GCA_001081785.1_10071_8_29	-	Gen-0029
Staphylococcus aureus M1482	1403866	PRJNA221412	221412	Terrabacteria group	Firmicutes	2.83502	32.9	-	JDAP01	45	2970	2798	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364005	GCA_000549865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/865/GCA_000549865.1_Stap_aure_M1482_V1	-	M1482
Staphylococcus aureus M1483	1403867	PRJNA221413	221413	Terrabacteria group	Firmicutes	2.84435	32.9	-	JDAQ01	52	3013	2836	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364006	GCA_000549885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/885/GCA_000549885.1_Stap_aure_M1483_V1	-	M1483
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72027	52	-	CIKY01	49	4884	4530	3/21/15	3/2/17	Contig	SC	SAMEA2056947	GCA_001081805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/805/GCA_001081805.1_10060_5_79	-	B1628
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.83744	37.9	-	MJNP01	15	2849	2779	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03359269	GCA_001825945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/945/GCA_001825945.1_ASM182594v1	-	BCW_3917
Mycobacterium tuberculosis TKK_03_0031	1397897	PRJNA218269	218269	Terrabacteria group	Actinobacteria	4.42029	65.5	-	JLUL01	3	4301	4105	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350452	GCA_000672635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/635/GCA_000672635.1_Myco_tube_TKK_03_0031_V1	-	TKK_03_0031
Escherichia coli BWH 34	1328433	PRJNA201973	201973	Proteobacteria	Gammaproteobacteria	5.41202	50.6	-	JAPS01	4	5681	5329	1/23/14	2/23/17	Scaffold	Broad Institute	SAMN02138598	GCA_000522345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/345/GCA_000522345.1_Esch_coli_BWH_34_V1	-	BWH 34
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.98527	39.8	-	CNQM02	161	2153	1934	3/23/15	3/11/17	Contig	SC	SAMEA1032527	GCA_001145025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/025/GCA_001145025.2_6952_7_2	-	R34-3163
Pseudomonas aeruginosa	287	PRJNA381838	381838	Proteobacteria	Gammaproteobacteria	6.82753	66.1	-	NDFU01	99	6625	6395	5/12/17	5/23/17	Contig	Nanyang Technological University	SAMN06689802	GCA_002134975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/975/GCA_002134975.1_ASM213497v1	-	PASGNDM590
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.86666	39.3	-	LLEF01	1057	3808	3605	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145662	GCA_001433355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/355/GCA_001433355.1_ASM143335v1	-	ABBL051
Klebsiella pneumoniae	573	PRJNA377546	377546	Proteobacteria	Gammaproteobacteria	5.85273	57.1	-	MZZR01	285	5994	5655	4/21/17	4/24/17	Contig	University of Sao Paulo	SAMN06461937	GCA_002104215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/215/GCA_002104215.1_ASM210421v1	-	4182
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.49802	64.1	-	FSPZ01	261	5516	5152	12/14/16	3/21/17	Scaffold	SC	SAMEA2155314	GCA_900141125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/125/GCA_900141125.1_10702_1_75	-	684
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18731	64.2	-	FVXV01	37	5200	5048	3/10/17	3/18/17	Scaffold	SC	SAMEA2150987	GCA_900141155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/155/GCA_900141155.1_10702_1_79	-	691
Klebsiella pneumoniae	573	PRJNA377546	377546	Proteobacteria	Gammaproteobacteria	5.51302	57.2	-	MZZU01	290	5663	5296	4/21/17	4/24/17	Contig	University of Sao Paulo	SAMN06461940	GCA_002104255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/255/GCA_002104255.1_ASM210425v1	-	4281
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.00492	38.9	-	LLDT01	120	3966	3663	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145650	GCA_001433655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/655/GCA_001433655.1_ASM143365v1	-	ABBL039
Pseudomonas aeruginosa	287	PRJNA381838	381838	Proteobacteria	Gammaproteobacteria	6.80604	66.1	-	NDFY01	82	6589	6367	5/12/17	5/23/17	Contig	Nanyang Technological University	SAMN06689828	GCA_002134985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/985/GCA_002134985.1_ASM213498v1	-	PASGNDM593
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10637	39.5	-	CLPK01	50	2307	2079	3/21/15	3/4/17	Contig	SC	SAMEA1028802	GCA_001145085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/085/GCA_001145085.1_6949_3_17	-	SMRU2465
Escherichia coli BIDMC 49b	1400159	PRJNA219257	219257	Proteobacteria	Gammaproteobacteria	5.08021	50.7	-	JAPT01	6	5255	4900	1/23/14	2/23/17	Scaffold	Broad Institute	SAMN02356589	GCA_000522365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/365/GCA_000522365.1_Esch_coli_BIDMC_49b_V1	-	BIDMC 49b
Mycobacterium tuberculosis TKK_03_0033	1397899	PRJNA218271	218271	Terrabacteria group	Actinobacteria	4.43436	65.5	-	JLUK01	3	4306	4113	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350454	GCA_000672655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/655/GCA_000672655.1_Myco_tube_TKK_03_0033_V1	-	TKK_03_0033
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.88982	37.9	-	MJNQ01	17	2916	2848	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03359270	GCA_001825975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/975/GCA_001825975.1_ASM182597v1	-	BCW_3918
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72025	52	-	CIOH01	43	4868	4512	3/21/15	2/27/17	Contig	SC	SAMEA2059529	GCA_001081825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/825/GCA_001081825.1_10060_6_16	-	SV547
Staphylococcus aureus M1484	1403868	PRJNA221414	221414	Terrabacteria group	Firmicutes	2.89171	32.9	-	JDAR01	26	3039	2870	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364007	GCA_000549905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/905/GCA_000549905.1_Stap_aure_M1484_V1	-	M1484
Staphylococcus aureus M1487	1403871	PRJNA221417	221417	Terrabacteria group	Firmicutes	2.91156	32.9	-	JDAS01	72	3113	2920	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364010	GCA_000549925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/925/GCA_000549925.1_Stap_aure_M1487_V1	-	M1487
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82531	52	-	CISA01	44	5005	4641	3/21/15	2/27/17	Contig	SC	SAMEA2067627	GCA_001081845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/845/GCA_001081845.1_10071_8_14	-	Gen-0014
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.91463	37.9	-	MJNR01	18	2947	2888	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03359271	GCA_001825985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/825/985/GCA_001825985.1_ASM182598v1	-	BCW_3919
Mycobacterium tuberculosis TKK_03_0034	1397900	PRJNA218272	218272	Terrabacteria group	Actinobacteria	4.41345	65.6	-	JLUJ01	6	4294	4106	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350455	GCA_000672675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/675/GCA_000672675.1_Myco_tube_TKK_03_0034_V1	-	TKK_03_0034
Escherichia coli BIDMC 49a	1400158	PRJNA219256	219256	Proteobacteria	Gammaproteobacteria	5.08362	50.7	-	JAPU01	7	5270	4898	1/23/14	2/23/17	Scaffold	Broad Institute	SAMN02356588	GCA_000522385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/385/GCA_000522385.1_Esch_coli_BIDMC_49a_V1	-	BIDMC 49a
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11645	39.5	-	CKIB01	46	2341	2104	3/21/15	3/4/17	Contig	SC	SAMEA1023850	GCA_001145145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/145/GCA_001145145.1_6631_3_15	-	23F
Pseudomonas aeruginosa	287	PRJNA369567	369567	Proteobacteria	Gammaproteobacteria	6.42324	66.3	-	MUKO01	63	6119	5955	5/22/17	5/24/17	Contig	SCH	SAMN06289377	GCA_002154915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/915/GCA_002154915.1_ASM215491v1	-	SCH_ABX19
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	3.91077	39.2	-	LLDU01	504	3821	3643	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145651	GCA_001433675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/675/GCA_001433675.1_ASM143367v1	-	ABBL040
Klebsiella pneumoniae	573	PRJNA377546	377546	Proteobacteria	Gammaproteobacteria	5.80841	57	-	MZZT01	360	6087	5691	4/21/17	4/24/17	Contig	University of Sao Paulo	SAMN06461939	GCA_002104265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/265/GCA_002104265.1_ASM210426v1	-	1849
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.19162	64.1	-	FSQD01	23	5219	5110	12/14/16	3/21/17	Scaffold	SC	SAMEA2158677	GCA_900141165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/165/GCA_900141165.1_10702_1_80	-	693
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.13884	64.1	-	FVXW01	47	5200	5019	3/10/17	3/18/17	Scaffold	SC	SAMEA2152232	GCA_900141185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/185/GCA_900141185.1_10702_1_81	-	694
Klebsiella pneumoniae	573	PRJNA377546	377546	Proteobacteria	Gammaproteobacteria	5.7591	57	-	MZZY01	333	5991	5637	4/21/17	4/24/17	Contig	University of Sao Paulo	SAMN06461944	GCA_002104295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/295/GCA_002104295.1_ASM210429v1	-	4448
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.08115	38.8	-	LLEH01	90	4021	3758	11/5/15	3/18/17	Contig	Northwestern University Feinberg School of Medicine	SAMN04145664	GCA_001433695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/433/695/GCA_001433695.1_ASM143369v1	-	ABBL053
Pseudomonas aeruginosa	287	PRJNA376562	376562	Proteobacteria	Gammaproteobacteria	6.43645	66.2	-	MWKP01	364	6350	5696	5/22/17	5/24/17	Contig	University of Sao Paulo	SAMN06434887	GCA_002156655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/655/GCA_002156655.1_ASM215665v1	-	ICB10P
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.1113	39.6	-	CNZB02	184	2307	2096	3/23/15	3/5/17	Contig	SC	SAMEA1463062	GCA_001145305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/305/GCA_001145305.2_7553_5_54	-	NP7101
Escherichia coli BIDMC 6	1328438	PRJNA202007	202007	Proteobacteria	Gammaproteobacteria	5.499	50.4	-	JAPV01	12	5681	5322	1/23/14	2/22/17	Scaffold	Broad Institute	SAMN02138626	GCA_000522405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/405/GCA_000522405.1_Esch_coli_BIDMC_6_V2	-	BIDMC 6
Mycobacterium tuberculosis TKK_03_0036	1397901	PRJNA218273	218273	Terrabacteria group	Actinobacteria	4.4425	65.4	-	JLUI01	5	4310	4117	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350456	GCA_000672695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/695/GCA_000672695.1_Myco_tube_TKK_03_0036_V1	-	TKK_03_0036
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.90237	37.9	-	MJNS01	21	2896	2827	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03359272	GCA_001826015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/015/GCA_001826015.1_ASM182601v1	-	BCW_3920
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.58902	52.1	-	CIKX01	41	4718	4381	3/21/15	2/27/17	Contig	SC	SAMEA2058624	GCA_001081885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/885/GCA_001081885.1_10060_5_21	-	A173
Staphylococcus aureus M1489	1403873	PRJNA221419	221419	Terrabacteria group	Firmicutes	2.8771	32.9	-	JDAT01	47	2997	2843	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364012	GCA_000549945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/945/GCA_000549945.1_Stap_aure_M1489_V1	-	M1489
Staphylococcus aureus M1490	1403874	PRJNA221420	221420	Terrabacteria group	Firmicutes	2.86027	32.9	-	JDAU01	20	2999	2831	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364013	GCA_000549965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/965/GCA_000549965.1_Stap_aure_M1490_V1	-	M1490
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71576	52	-	CIOA01	42	4875	4513	3/21/15	3/2/17	Contig	SC	SAMEA2056949	GCA_001081905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/905/GCA_001081905.1_10060_5_85	-	W478
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.87839	37.9	-	MJNU01	11	2906	2835	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03359274	GCA_001826055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/055/GCA_001826055.1_ASM182605v1	-	BCW_3922
Mycobacterium tuberculosis TKK_03_0043	1397902	PRJNA218274	218274	Terrabacteria group	Actinobacteria	4.40456	65.5	-	JLUH01	5	4294	4103	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350457	GCA_000672715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/715/GCA_000672715.1_Myco_tube_TKK_03_0043_V1	-	TKK_03_0043
Escherichia coli K02	1409786	PRJNA223654	223654	Proteobacteria	Gammaproteobacteria	4.83116	50.6	-	JHPO01	18	4945	4630	3/28/14	2/23/17	Scaffold	Broad Institute	SAMN02381109	GCA_000607285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/285/GCA_000607285.1_Esch_coli_K02_V1	-	K02
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09249	39.6	-	COBK02	126	2282	2060	3/23/15	3/5/17	Contig	SC	SAMEA1463248	GCA_001145465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/465/GCA_001145465.2_7622_2_42	-	BR1115
Pseudomonas aeruginosa	287	PRJNA382794	382794	Proteobacteria	Gammaproteobacteria	6.51899	66	-	NFRZ01	131	6290	6063	5/25/17	5/31/17	Contig	University of Applied Sciences and Arts Western Switzerland hepia	SAMN06718840	GCA_002157485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/485/GCA_002157485.1_ASM215748v1	-	4014
Acinetobacter baumannii	470	PRJNA299487	299487	Proteobacteria	Gammaproteobacteria	3.85731	38.9	-	LLZD01	80	3721	3542	11/9/15	3/18/17	Contig	Walter Reed Army Institute of Research	SAMN04208819	GCA_001441355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/355/GCA_001441355.1_ASM144135v1	25824815	MRSN17592
Klebsiella pneumoniae	573	PRJNA377546	377546	Proteobacteria	Gammaproteobacteria	5.8167	57	-	MZZX01	331	6000	5628	4/21/17	4/24/17	Contig	University of Sao Paulo	SAMN06461943	GCA_002104315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/315/GCA_002104315.1_ASM210431v1	-	1799
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.28269	64	-	FSQE01	30	5373	5219	12/14/16	3/21/17	Scaffold	SC	SAMEA2152244	GCA_900141205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/205/GCA_900141205.1_10702_1_83	-	696
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.77933	64.2	-	FVXR01	23	4721	4614	3/10/17	3/18/17	Scaffold	SC	SAMEA2145150	GCA_900141215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/215/GCA_900141215.1_10702_1_85	-	700
Klebsiella pneumoniae	573	PRJNA377546	377546	Proteobacteria	Gammaproteobacteria	5.93394	57	-	MZZV01	313	6120	5735	4/21/17	4/24/17	Contig	University of Sao Paulo	SAMN06461941	GCA_002104355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/355/GCA_002104355.1_ASM210435v1	-	1787
Acinetobacter baumannii	470	PRJNA299487	299487	Proteobacteria	Gammaproteobacteria	3.87052	38.9	-	LLZE01	82	3738	3557	11/9/15	3/18/17	Contig	Walter Reed Army Institute of Research	SAMN04208820	GCA_001441405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/405/GCA_001441405.1_ASM144140v1	25824815	MRSN17593
Pseudomonas aeruginosa	287	PRJNA388154	388154	Proteobacteria	Gammaproteobacteria	6.84283	66	-	NINP01	87	6622	6389	6/9/17	6/12/17	Contig	"UCIBIO/REQUIMTE, Laboratory of Bacteriology, Faculty of Pharmacy, University of Porto"	SAMN07171782	GCA_002188505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/505/GCA_002188505.1_ASM218850v1	-	FFUP_PS_CB5
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06507	39.6	-	CNXG02	253	2205	2007	3/23/15	3/11/17	Contig	SC	SAMEA1032711	GCA_001145505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/505/GCA_001145505.2_7001_3_15	-	R34-3151
Escherichia coli O91:H14 str. 2009C-3227	1446764	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.30977	50.6	-	JHHF01	112	5642	5261	4/8/14	2/25/17	Scaffold	CDC	SAMN02352928	GCA_000619725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/725/GCA_000619725.2_Ec2009C-3227	25103754	2009C-3227
Mycobacterium tuberculosis TKK_03_0045	1397903	PRJNA218275	218275	Terrabacteria group	Actinobacteria	4.40938	65.5	-	JLUG01	3	4293	4098	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350458	GCA_000672735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/735/GCA_000672735.1_Myco_tube_TKK_03_0045_V1	-	TKK_03_0045
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.92726	37.9	-	MJNV01	20	2982	2903	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03359275	GCA_001826075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/075/GCA_001826075.1_ASM182607v1	-	BCW_3923
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82833	52	-	CITS01	41	5016	4652	3/21/15	3/2/17	Contig	SC	SAMEA2064023	GCA_001081945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/945/GCA_001081945.1_10071_8_6	-	Gen-0006
Staphylococcus aureus M1491	1403875	PRJNA221421	221421	Terrabacteria group	Firmicutes	2.8493	32.9	-	JDAV01	13	2991	2826	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364014	GCA_000549985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/549/985/GCA_000549985.1_Stap_aure_M1491_V1	-	M1491
Staphylococcus aureus M1493	1403877	PRJNA221423	221423	Terrabacteria group	Firmicutes	2.85998	32.9	-	JDAW01	18	2998	2826	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364016	GCA_000550005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/005/GCA_000550005.1_Stap_aure_M1493_V1	-	M1493
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72006	52	-	CISG01	43	4868	4520	3/21/15	3/2/17	Contig	SC	SAMEA2067631	GCA_001081965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/965/GCA_001081965.1_10071_8_26	-	Gen-0026
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.89771	37.9	-	MJNW01	19	2892	2817	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03359276	GCA_001826095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/095/GCA_001826095.1_ASM182609v1	-	BCW_3924
Mycobacterium tuberculosis TKK_03_0078	1397904	PRJNA218276	218276	Terrabacteria group	Actinobacteria	4.40936	65.5	-	JLUF01	5	4291	4099	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350459	GCA_000672755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/755/GCA_000672755.1_Myco_tube_TKK_03_0078_V1	-	TKK_03_0078
Escherichia coli O26:H1 str. 2009C-4747	1446715	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.37749	50.3	-	JHGM01	274	5880	5392	4/15/14	2/23/17	Scaffold	CDC	SAMN02352948	GCA_000632575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/575/GCA_000632575.1_Ec2009C-4747	25103754	2009C-4747
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08272	39.7	-	CLLD01	60	2316	2096	3/21/15	3/10/17	Contig	SC	SAMEA1028923	GCA_001145645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/645/GCA_001145645.1_6938_5_2	-	SMRU2642
Pseudomonas aeruginosa	287	PRJNA388154	388154	Proteobacteria	Gammaproteobacteria	7.2751	65.7	-	NINR01	202	7068	6674	6/9/17	6/12/17	Contig	"UCIBIO/REQUIMTE, Laboratory of Bacteriology, Faculty of Pharmacy, University of Porto"	SAMN07171780	GCA_002188535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/535/GCA_002188535.1_ASM218853v1	-	FFUP_PS_144
Acinetobacter baumannii	470	PRJNA299487	299487	Proteobacteria	Gammaproteobacteria	3.91788	38.8	-	LLZF01	78	3780	3596	11/9/15	3/18/17	Contig	Walter Reed Army Institute of Research	SAMN04209217	GCA_001441415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/415/GCA_001441415.1_ASM144141v1	25824815	MRSN16901
Klebsiella pneumoniae	573	PRJNA377546	377546	Proteobacteria	Gammaproteobacteria	5.52759	57.2	-	MZZW01	359	5692	5334	4/21/17	4/24/17	Contig	University of Sao Paulo	SAMN06461942	GCA_002104365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/365/GCA_002104365.1_ASM210436v1	-	4477
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.06611	64	-	FVXS01	22	5167	5009	3/10/17	3/18/17	Scaffold	SC	SAMEA2144932	GCA_900141225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/225/GCA_900141225.1_10702_1_89	-	705
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.28261	64	-	FSQG01	26	5369	5213	12/14/16	3/21/17	Scaffold	SC	SAMEA2146670	GCA_900141235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/235/GCA_900141235.1_10702_1_87	-	702
Klebsiella pneumoniae	573	PRJNA377546	377546	Proteobacteria	Gammaproteobacteria	5.81267	56.9	-	NBOT01	1343	6403	5437	4/21/17	4/24/17	Contig	University of Sao Paulo	SAMN06461946	GCA_002104705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/705/GCA_002104705.1_ASM210470v1	-	1853
Acinetobacter baumannii	470	PRJNA299487	299487	Proteobacteria	Gammaproteobacteria	3.91674	38.8	-	LMAM01	89	3780	3598	11/9/15	3/18/17	Contig	Walter Reed Army Institute of Research	SAMN04211933	GCA_001441455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/455/GCA_001441455.1_ASM144145v1	25824815	MRSN16896
Pseudomonas aeruginosa	287	PRJNA388154	388154	Proteobacteria	Gammaproteobacteria	6.99893	66.2	-	NINQ01	540	7056	6319	6/9/17	6/12/17	Contig	"UCIBIO/REQUIMTE, Laboratory of Bacteriology, Faculty of Pharmacy, University of Porto"	SAMN07171781	GCA_002188545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/545/GCA_002188545.1_ASM218854v1	-	FFUP_PS_12
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.262	39.5	-	CLNO01	88	2513	2259	3/21/15	3/11/17	Contig	SC	SAMEA1028774	GCA_001145685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/685/GCA_001145685.1_6938_8_24	-	SMRU2736
Escherichia coli O111:H8 str. 2009EL-2169	1446509	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.20847	50.3	-	JHGB01	204	5662	5188	4/15/14	2/25/17	Scaffold	CDC	SAMN02352959	GCA_000632595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/595/GCA_000632595.2_Ec2009EL-2169	25103754	2009EL-2169
Mycobacterium tuberculosis TKK_03_0081	1397905	PRJNA218277	218277	Terrabacteria group	Actinobacteria	4.40271	65.6	-	JLUE01	1	4286	4116	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350460	GCA_000672775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/775/GCA_000672775.1_Myco_tube_TKK_03_0081_V1	-	TKK_03_0081
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.01432	37.8	-	MJNX01	24	3064	2989	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03359277	GCA_001826105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/105/GCA_001826105.1_ASM182610v1	-	BCW_3925
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72005	52	-	CIRN01	42	4875	4523	3/21/15	3/2/17	Contig	SC	SAMEA2064152	GCA_001081985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/985/GCA_001081985.1_10071_8_21	-	Gen-0021
Staphylococcus aureus M1496	1403879	PRJNA221425	221425	Terrabacteria group	Firmicutes	2.82551	32.8	-	JDAX01	48	2970	2829	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364018	GCA_000550025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/025/GCA_000550025.1_Stap_aure_M1496_V1	-	M1496
Staphylococcus aureus M1497	1403880	PRJNA221426	221426	Terrabacteria group	Firmicutes	2.89988	32.9	-	JDAY01	52	3064	2902	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364019	GCA_000550045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/045/GCA_000550045.1_Stap_aure_M1497_V1	-	M1497
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73481	52	-	CIMY01	43	4903	4547	3/21/15	2/27/17	Contig	SC	SAMEA2055896	GCA_001082005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/005/GCA_001082005.1_10060_5_35	-	A245
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.05618	37.8	-	MJNY01	24	3126	3034	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03359278	GCA_001826135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/135/GCA_001826135.1_ASM182613v1	-	BCW_3926
Mycobacterium tuberculosis TKK_03_0082	1397906	PRJNA218278	218278	Terrabacteria group	Actinobacteria	4.40963	65.6	-	JLUD01	4	4288	4122	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02350461	GCA_000672795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/795/GCA_000672795.1_Myco_tube_TKK_03_0082_V1	-	TKK_03_0082
Escherichia coli O111:NM str. 2010C-3053	1446511	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.27041	50.2	-	JHFZ01	203	5675	5203	4/15/14	2/25/17	Scaffold	CDC	SAMN02352961	GCA_000632615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/615/GCA_000632615.2_Ec2010C-3053	25103754	2010C-3053
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05488	39.6	-	CNWP02	180	2250	2049	3/23/15	3/11/17	Contig	SC	SAMEA1032464	GCA_001145725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/725/GCA_001145725.2_7001_2_20	-	R34-3125
Pseudomonas aeruginosa	287	PRJNA388154	388154	Proteobacteria	Gammaproteobacteria	7.02055	65.8	-	NINS01	136	6832	6509	6/9/17	6/12/17	Contig	"UCIBIO/REQUIMTE, Laboratory of Bacteriology, Faculty of Pharmacy, University of Porto"	SAMN07171779	GCA_002188565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/565/GCA_002188565.1_ASM218856v1	-	FFUP_PS_105
Acinetobacter baumannii	470	PRJNA299487	299487	Proteobacteria	Gammaproteobacteria	3.9158	38.8	-	LMAO01	87	3780	3594	11/9/15	3/18/17	Contig	Walter Reed Army Institute of Research	SAMN04211932	GCA_001441465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/465/GCA_001441465.1_ASM144146v1	25824815	MRSN16898
Klebsiella pneumoniae	573	PRJNA377546	377546	Proteobacteria	Gammaproteobacteria	5.57798	56.7	-	NBOU01	1816	6372	5096	4/21/17	4/24/17	Contig	University of Sao Paulo	SAMN06461947	GCA_002104715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/715/GCA_002104715.1_ASM210471v1	-	4326
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.9394	64.2	-	FVXX01	29	4952	4802	3/10/17	3/18/17	Scaffold	SC	SAMEA2159875	GCA_900141245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/245/GCA_900141245.1_10702_1_88	-	704
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.43383	64	-	FVXT01	43	5548	5352	3/10/17	3/18/17	Scaffold	SC	SAMEA2159391	GCA_900141255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/255/GCA_900141255.1_10702_1_84	-	698
Klebsiella pneumoniae	573	PRJNA383450	383450	Proteobacteria	Gammaproteobacteria	5.567	57.2	-	NELT01	141	5728	5422	4/28/17	5/3/17	Contig	UCLA Clinical Microbiology Laboratory	SAMN06765486	GCA_002115605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/605/GCA_002115605.1_ASM211560v1	28396547	KP1246
Acinetobacter baumannii	470	PRJNA299487	299487	Proteobacteria	Gammaproteobacteria	3.91668	38.8	-	LMAN01	81	3785	3598	11/9/15	3/18/17	Contig	Walter Reed Army Institute of Research	SAMN04211921	GCA_001441475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/475/GCA_001441475.1_ASM144147v1	25824815	MRSN16881
Pseudomonas aeruginosa	287	PRJNA388154	388154	Proteobacteria	Gammaproteobacteria	7.00227	66	-	NINU01	158	6751	6422	6/9/17	6/12/17	Contig	"UCIBIO/REQUIMTE, Laboratory of Bacteriology, Faculty of Pharmacy, University of Porto"	SAMN07171777	GCA_002188585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/585/GCA_002188585.1_ASM218858v1	-	FFUP_PS_35
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.03511	39.6	-	CKRW01	52	2229	1992	3/21/15	3/10/17	Contig	SC	SAMEA1023860	GCA_001145745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/745/GCA_001145745.1_6680_8_21	-	SMRU213
Escherichia coli O111:H8 str. 2009C-4126	1446508	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.1057	50.3	-	JHGR01	183	5499	5058	4/15/14	2/23/17	Scaffold	CDC	SAMN02352943	GCA_000632635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/635/GCA_000632635.1_Ec2009C-4126	25103754	2009C-4126
Mycobacterium tuberculosis TKK_04_0001	1397907	PRJNA218279	218279	Terrabacteria group	Actinobacteria	4.40754	65.6	-	JLUC01	4	4294	4105	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350462	GCA_000672815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/815/GCA_000672815.1_Myco_tube_TKK_04_0001_V1	-	TKK_04_0001
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.89005	37.9	-	MJNZ01	16	2919	2830	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03359279	GCA_001826155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/155/GCA_001826155.1_ASM182615v1	-	BCW_3927
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73004	52	-	CIRI01	52	4891	4538	3/21/15	2/27/17	Contig	SC	SAMEA1965940	GCA_001082025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/025/GCA_001082025.1_10071_3_76	-	A109
Staphylococcus aureus M1500	1403883	PRJNA221429	221429	Terrabacteria group	Firmicutes	2.89466	32.9	-	JDAZ01	29	3049	2880	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364022	GCA_000550065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/065/GCA_000550065.1_Stap_aure_M1500_V1	-	M1500
Staphylococcus aureus M1501	1403884	PRJNA221430	221430	Terrabacteria group	Firmicutes	2.8054	32.9	-	JDBA01	66	2925	2746	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364023	GCA_000550085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/085/GCA_000550085.1_Stap_aure_M1501_V1	-	M1501
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72354	52	-	CITW01	45	4879	4516	3/21/15	3/2/17	Contig	SC	SAMEA2067726	GCA_001082045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/045/GCA_001082045.1_10071_8_77	-	2010K-0517
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.95023	37.9	-	MJOB01	21	2992	2917	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03357919	GCA_001826165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/165/GCA_001826165.1_ASM182616v1	-	BCW_3929
Mycobacterium tuberculosis TKK_04_0002	1397908	PRJNA218280	218280	Terrabacteria group	Actinobacteria	4.40548	65.5	-	JLUB01	8	4278	4102	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350463	GCA_000672835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/835/GCA_000672835.1_Myco_tube_TKK_04_0002_V1	-	TKK_04_0002
Escherichia coli O111:H8 str. 2011C-3453	1446510	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.41766	50.2	-	JHLU01	220	5883	5381	4/15/14	2/25/17	Scaffold	CDC	SAMN02353025	GCA_000632675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/675/GCA_000632675.2_Ec2011C-3453	25103754	2011C-3453
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.1361	39.6	-	CKQW01	42	2334	2135	3/21/15	3/11/17	Contig	SC	SAMEA1024756	GCA_001145865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/865/GCA_001145865.1_6680_7_23	-	SMRU983
Pseudomonas aeruginosa	287	PRJNA388154	388154	Proteobacteria	Gammaproteobacteria	7.50498	65.3	-	NINT01	436	7557	7027	6/9/17	6/12/17	Contig	"UCIBIO/REQUIMTE, Laboratory of Bacteriology, Faculty of Pharmacy, University of Porto"	SAMN07171778	GCA_002188615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/615/GCA_002188615.1_ASM218861v1	-	FFUP_PS_37
Acinetobacter baumannii	470	PRJNA299487	299487	Proteobacteria	Gammaproteobacteria	3.91796	38.8	-	LMAL01	80	3783	3600	11/9/15	3/18/17	Contig	Walter Reed Army Institute of Research	SAMN04211931	GCA_001441485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/485/GCA_001441485.1_ASM144148v1	25824815	MRSN16882
Klebsiella pneumoniae	573	PRJNA383450	383450	Proteobacteria	Gammaproteobacteria	5.39554	57.3	-	NELR01	97	5514	5236	4/28/17	5/3/17	Contig	UCLA Clinical Microbiology Laboratory	SAMN06765484	GCA_002115625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/625/GCA_002115625.1_ASM211562v1	28396547	KP1244
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.1005	64.1	-	FSQF01	19	5111	5010	12/14/16	3/21/17	Scaffold	SC	SAMEA2150651	GCA_900141265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/265/GCA_900141265.1_10702_1_86	-	701
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.84113	64.1	-	FVXZ01	19	4799	4656	3/10/17	3/18/17	Scaffold	SC	SAMEA2148667	GCA_900141275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/275/GCA_900141275.1_10702_1_90	-	707
Klebsiella pneumoniae	573	PRJNA383450	383450	Proteobacteria	Gammaproteobacteria	5.40629	57.3	-	NELS01	113	5538	5250	4/28/17	5/3/17	Contig	UCLA Clinical Microbiology Laboratory	SAMN06765485	GCA_002115645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/645/GCA_002115645.1_ASM211564v1	28396547	KP1245
Acinetobacter baumannii	470	PRJNA300270	300270	Proteobacteria	Gammaproteobacteria	3.82618	39.1	-	LMZX01	74	3694	3535	11/9/15	3/18/17	Contig	Walter Reed Army Institute of Research	SAMN04229822	GCA_001441545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/545/GCA_001441545.1_ASM144154v1	25824815	MRSN15038
Pseudomonas aeruginosa	287	PRJNA388154	388154	Proteobacteria	Gammaproteobacteria	7.24339	65.7	-	NINV01	1540	7616	6046	6/9/17	6/12/17	Contig	"UCIBIO/REQUIMTE, Laboratory of Bacteriology, Faculty of Pharmacy, University of Porto"	SAMN07171776	GCA_002188625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/625/GCA_002188625.1_ASM218862v1	-	HSV3483
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.02026	39.8	-	CKRC01	64	2216	2016	3/21/15	3/11/17	Contig	SC	SAMEA1024777	GCA_001145885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/885/GCA_001145885.1_6680_7_24	-	SMRU984
Escherichia coli BIDMC 83	1445863	PRJNA234269	234269	Proteobacteria	Gammaproteobacteria	5.09073	50.5	-	JJMX01	97	5260	4914	4/15/14	2/23/17	Scaffold	Broad Institute	SAMN02581402	GCA_000633655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/655/GCA_000633655.1_Esch_coli_BIDMC_83_V1	-	BIDMC 83
Mycobacterium tuberculosis TKK_04_0003	1397909	PRJNA218281	218281	Terrabacteria group	Actinobacteria	4.43338	65.5	-	JLUA01	6	4294	4101	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350464	GCA_000672855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/855/GCA_000672855.1_Myco_tube_TKK_04_0003_V1	-	TKK_04_0003
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.12241	37.9	-	MJOA01	23	3192	3108	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03359280	GCA_001826185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/185/GCA_001826185.1_ASM182618v1	-	BCW_3928
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72176	52	-	CINY01	49	4886	4524	3/21/15	3/2/17	Contig	SC	SAMEA2058814	GCA_001082065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/065/GCA_001082065.1_10060_5_75	-	B1542
Staphylococcus aureus M1504	1403887	PRJNA221433	221433	Terrabacteria group	Firmicutes	2.83972	32.8	-	JDBB01	48	3005	2819	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364026	GCA_000550105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/105/GCA_000550105.1_Stap_aure_M1504_V1	-	M1504
Staphylococcus aureus M1505	1403888	PRJNA221434	221434	Terrabacteria group	Firmicutes	2.86099	32.9	-	JDBC01	38	2989	2827	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364027	GCA_000550125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/125/GCA_000550125.1_Stap_aure_M1505_V1	-	M1505
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71339	52.1	-	CIMX01	48	4878	4523	3/21/15	3/2/17	Contig	SC	SAMEA2055897	GCA_001082085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/085/GCA_001082085.1_10060_5_38	-	A248
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.94147	37.9	-	MJOC01	20	2976	2883	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03357920	GCA_001826215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/215/GCA_001826215.1_ASM182621v1	-	BCW_3930
Mycobacterium tuberculosis TKK_04_0006	1397910	PRJNA218282	218282	Terrabacteria group	Actinobacteria	4.41141	65.5	-	JLTZ01	5	4304	4105	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350465	GCA_000672875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/875/GCA_000672875.1_Myco_tube_TKK_04_0006_V1	-	TKK_04_0006
Escherichia coli BIDMC 82	1445862	PRJNA234268	234268	Proteobacteria	Gammaproteobacteria	5.41577	50.3	-	JJMY01	145	5650	5286	4/15/14	2/23/17	Scaffold	Broad Institute	SAMN02581401	GCA_000633675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/675/GCA_000633675.1_Esch_coli_BIDMC_82_V1	-	BIDMC 82
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.07974	39.7	-	CMCP01	75	2311	2065	3/21/15	3/10/17	Contig	SC	SAMEA1029282	GCA_001146065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/065/GCA_001146065.1_7004_8_83	-	SMRU2915
Pseudomonas aeruginosa	287	PRJNA388154	388154	Proteobacteria	Gammaproteobacteria	6.99167	65.8	-	NINO01	260	6794	6392	6/9/17	6/12/17	Contig	"UCIBIO/REQUIMTE, Laboratory of Bacteriology, Faculty of Pharmacy, University of Porto"	SAMN07171783	GCA_002188645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/645/GCA_002188645.1_ASM218864v1	-	FFUP_PS_CB58
Acinetobacter baumannii	470	PRJNA300270	300270	Proteobacteria	Gammaproteobacteria	3.82494	39.1	-	LMZV01	79	3696	3533	11/9/15	3/18/17	Contig	Walter Reed Army Institute of Research	SAMN04229824	GCA_001441555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/555/GCA_001441555.1_ASM144155v1	25824815	MRSN20315
Klebsiella pneumoniae	573	PRJNA380921	380921	Proteobacteria	Gammaproteobacteria	5.3718	57.3	-	NBMT01	120	5487	5096	5/8/17	5/10/17	Contig	University of Sao Paulo	SAMN06651639	GCA_002119075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/075/GCA_002119075.1_ASM211907v1	-	Kp76
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.26833	64.1	-	FVYA01	96	5358	5174	3/10/17	3/18/17	Scaffold	SC	SAMEA2154836	GCA_900141295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/295/GCA_900141295.1_10702_1_94	-	713
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.36406	64.1	-	FSQH01	46	5454	5291	12/14/16	3/21/17	Scaffold	SC	SAMEA2160651	GCA_900141305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/305/GCA_900141305.1_10702_1_91	-	708
Klebsiella pneumoniae	573	PRJNA381912	381912	Proteobacteria	Gammaproteobacteria	5.23898	57.4	-	NBYZ01	113	5257	4771	5/8/17	5/10/17	Contig	University of Sao Paulo	SAMN06692168	GCA_002119085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/085/GCA_002119085.1_ASM211908v1	-	KPHU468
Acinetobacter baumannii	470	PRJNA300270	300270	Proteobacteria	Gammaproteobacteria	3.86087	39	-	LMZW01	66	3760	3595	11/9/15	3/18/17	Contig	Walter Reed Army Institute of Research	SAMN04229823	GCA_001441565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/565/GCA_001441565.1_ASM144156v1	25824815	MRSN15084
Pseudomonas aeruginosa	287	PRJNA388154	388154	Proteobacteria	Gammaproteobacteria	7.19234	65.6	-	NINN01	134	7102	6788	6/9/17	6/12/17	Contig	"UCIBIO/REQUIMTE, Laboratory of Bacteriology, Faculty of Pharmacy, University of Porto"	SAMN07171784	GCA_002188695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/695/GCA_002188695.1_ASM218869v1	-	FFUP_PS_65
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.07879	39.6	-	CLVS01	72	2297	2070	3/21/15	3/10/17	Contig	SC	SAMEA1026193	GCA_001146165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/165/GCA_001146165.1_6983_3_68	-	SMRU2276
Escherichia coli BIDMC 58	1438668	PRJNA234146	234146	Proteobacteria	Gammaproteobacteria	5.38093	50.7	-	JMUW01	13	5654	5293	5/19/14	2/23/17	Scaffold	Broad Institute	SAMN02581279	GCA_000692375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/375/GCA_000692375.1_Esch_coli_BIDMC_58_V1	-	BIDMC 58
Mycobacterium tuberculosis TKK_04_0014	1397911	PRJNA218283	218283	Terrabacteria group	Actinobacteria	4.41791	65.5	-	JLTY01	6	4304	4100	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350466	GCA_000672895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/895/GCA_000672895.1_Myco_tube_TKK_04_0014_V1	-	TKK_04_0014
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.88925	37.8	-	MJOF01	15	2905	2821	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03357921	GCA_001826235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/235/GCA_001826235.1_ASM182623v1	-	BCW_3931
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73804	52.1	-	CIQS01	45	4904	4556	3/21/15	2/27/17	Contig	SC	SAMEA2056954	GCA_001082105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/105/GCA_001082105.1_10071_3_5	-	TY019
Staphylococcus aureus M1506	1403889	PRJNA221435	221435	Terrabacteria group	Firmicutes	2.90601	32.9	-	JDBD01	37	3047	2860	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364028	GCA_000550145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/145/GCA_000550145.1_Stap_aure_M1506_V1	-	M1506
Staphylococcus aureus M1507	1403890	PRJNA221436	221436	Terrabacteria group	Firmicutes	2.86079	32.9	-	JDBE01	14	3004	2840	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364029	GCA_000550165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/165/GCA_000550165.1_Stap_aure_M1507_V1	-	M1507
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71964	52	-	CISZ01	41	4872	4520	3/21/15	2/27/17	Contig	SC	SAMEA2064160	GCA_001082125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/125/GCA_001082125.1_10071_8_45	-	Gen-0045
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.97507	37.9	-	MJOG01	19	3030	2939	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03357922	GCA_001826245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/245/GCA_001826245.1_ASM182624v1	-	BCW_3932
Mycobacterium tuberculosis TKK_04_0015	1397912	PRJNA218284	218284	Terrabacteria group	Actinobacteria	4.41321	65.6	-	JLTX01	4	4297	4117	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350467	GCA_000672915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/915/GCA_000672915.1_Myco_tube_TKK_04_0015_V1	-	TKK_04_0015
Escherichia coli BIDMC 59	1438669	PRJNA234147	234147	Proteobacteria	Gammaproteobacteria	4.67721	50.8	-	JMUX01	2	4764	4515	5/19/14	2/23/17	Scaffold	Broad Institute	SAMN02581280	GCA_000692395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/395/GCA_000692395.1_Esch_coli_BIDMC_59_V1	-	BIDMC 59
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.14406	39.7	-	CNPU02	205	2271	1986	3/22/15	3/15/17	Contig	SC	SAMEA1032507	GCA_001146185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/185/GCA_001146185.2_6952_4_22	-	508907
Pseudomonas aeruginosa	287	PRJNA380799	380799	Proteobacteria	Gammaproteobacteria	6.78219	66.1	-	NBEZ01	110	6532	6328	6/9/17	6/12/17	Contig	"UCIBIO/REQUIMTE, Laboratory of Bacteriology, Faculty of Pharmacy, University of Porto"	SAMN06648200	GCA_002189115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/115/GCA_002189115.1_ASM218911v1	-	FFUP_PS_690
Acinetobacter baumannii	470	PRJNA300270	300270	Proteobacteria	Gammaproteobacteria	3.82605	39.1	-	LMYO01	77	3699	3536	11/9/15	3/18/17	Contig	Walter Reed Army Institute of Research	SAMN04229825	GCA_001441625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/625/GCA_001441625.1_ASM144162v1	25824815	MRSN20755
Klebsiella pneumoniae	573	PRJNA353361	353361	Proteobacteria	Gammaproteobacteria	5.64862	57.1	-	MSZG01	172	5813	5542	5/9/17	5/22/17	Contig	New Jersey Medical School-Rutgers University	SAMN06200337	GCA_002119885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/885/GCA_002119885.1_ASM211988v1	-	KL027
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.20205	64.1	-	FSQK01	59	5210	5059	12/14/16	3/21/17	Scaffold	SC	SAMEA2153563	GCA_900141315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/315/GCA_900141315.1_10702_1_96	-	724
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.10056	64.1	-	FSQI01	22	5113	5010	12/14/16	3/21/17	Scaffold	SC	SAMEA2144712	GCA_900141325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/325/GCA_900141325.1_10702_1_92	-	711
Klebsiella pneumoniae	573	PRJNA353361	353361	Proteobacteria	Gammaproteobacteria	5.69347	57.1	-	MSZH01	175	5871	5604	5/9/17	5/22/17	Contig	New Jersey Medical School-Rutgers University	SAMN06200338	GCA_002119895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/895/GCA_002119895.1_ASM211989v1	-	KL033
Acinetobacter baumannii	470	PRJNA300270	300270	Proteobacteria	Gammaproteobacteria	3.82539	39.1	-	LMZY01	78	3697	3534	11/9/15	3/18/17	Contig	Walter Reed Army Institute of Research	SAMN04229826	GCA_001441645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/645/GCA_001441645.1_ASM144164v1	25824815	MRSN7081
Pseudomonas aeruginosa	287	PRJNA371681	371681	Proteobacteria	Gammaproteobacteria	6.24758	66.4	-	MWUL01	149	5958	5788	6/9/17	6/12/17	Contig	University of Malaya	SAMN06480269	GCA_002189505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/505/GCA_002189505.1_ASM218950v1	-	M26
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07965	39.7	-	CNSD02	182	2286	2059	3/23/15	3/11/17	Contig	SC	SAMEA1032454	GCA_001146345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/345/GCA_001146345.2_6999_3_1	-	R34-3230
Escherichia coli BIDMC 62	1438670	PRJNA234150	234150	Proteobacteria	Gammaproteobacteria	5.3923	50.7	-	JMUY01	12	5666	5301	5/19/14	2/23/17	Scaffold	Broad Institute	SAMN02581283	GCA_000692415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/415/GCA_000692415.1_Esch_coli_BIDMC_62_V1	-	BIDMC 62
Mycobacterium tuberculosis TKK_04_0017	1397913	PRJNA218285	218285	Terrabacteria group	Actinobacteria	4.40538	65.6	-	JLTW01	5	4296	4103	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350468	GCA_000672935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/935/GCA_000672935.1_Myco_tube_TKK_04_0017_V1	-	TKK_04_0017
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.82271	38.2	-	MJOH01	10	2827	2743	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03357923	GCA_001826265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/265/GCA_001826265.1_ASM182626v1	-	BCW_3933
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82712	52	-	CISR01	43	5016	4647	3/21/15	2/27/17	Contig	SC	SAMEA2064157	GCA_001082185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/185/GCA_001082185.1_10071_8_36	-	Gen-0036
Staphylococcus aureus M1508	1403891	PRJNA221437	221437	Terrabacteria group	Firmicutes	2.85389	32.9	-	JDBF01	30	2993	2821	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364030	GCA_000550185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/185/GCA_000550185.1_Stap_aure_M1508_V1	-	M1508
Staphylococcus aureus M1511	1403893	PRJNA221439	221439	Terrabacteria group	Firmicutes	2.8944	32.8	-	JDBG01	87	3034	2867	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364032	GCA_000550205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/205/GCA_000550205.1_Stap_aure_M1511_V1	-	M1511
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93325	51.8	-	CIUG01	55	5128	4747	3/21/15	2/27/17	Contig	SC	SAMEA2067730	GCA_001082265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/265/GCA_001082265.1_10071_8_89	-	2010K-0523
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.82949	38.1	-	MJOI01	10	2817	2748	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03357924	GCA_001826295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/295/GCA_001826295.1_ASM182629v1	-	BCW_3934
Mycobacterium tuberculosis TKK_04_0018	1397914	PRJNA218286	218286	Terrabacteria group	Actinobacteria	4.40322	65.5	-	JLTV01	5	4297	4099	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350469	GCA_000672955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/955/GCA_000672955.1_Myco_tube_TKK_04_0018_V1	-	TKK_04_0018
Escherichia coli BIDMC 63	1438671	PRJNA234151	234151	Proteobacteria	Gammaproteobacteria	5.16234	50.8	-	JMUZ01	6	5304	4949	5/19/14	2/23/17	Scaffold	Broad Institute	SAMN02581284	GCA_000692435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/435/GCA_000692435.1_Esch_coli_BIDMC_63_V1	-	BIDMC 63
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.08381	39.6	-	CKOI01	61	2318	2070	3/21/15	3/10/17	Contig	SC	SAMEA1024101	GCA_001146445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/445/GCA_001146445.1_6673_8_18	-	SMRU258
Pseudomonas aeruginosa	287	PRJNA184698	184698	Proteobacteria	Gammaproteobacteria	6.36413	66.4	-	MTLL01	256	6112	5861	6/14/17	6/19/17	Contig	Georgia Institute of Technology	SAMN06009456	GCA_002192765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/765/GCA_002192765.1_ASM219276v1	-	DP_4
Acinetobacter baumannii	470	PRJNA299487	299487	Proteobacteria	Gammaproteobacteria	4.10309	39	-	LNBD01	114	4023	3892	11/12/15	3/18/17	Contig	Walter Reed Army Institute of Research	SAMN04252827	GCA_001442575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/575/GCA_001442575.1_ASM144257v1	25824815	MRSN16874
Klebsiella pneumoniae	573	PRJNA353361	353361	Proteobacteria	Gammaproteobacteria	5.725	57.1	-	MSZJ01	123	5800	5513	5/9/17	5/22/17	Contig	New Jersey Medical School-Rutgers University	SAMN06200340	GCA_002119955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/955/GCA_002119955.1_ASM211995v1	-	KP024
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.33592	64.1	-	FSQJ01	46	5437	5241	12/14/16	3/21/17	Scaffold	SC	SAMEA2153253	GCA_900141335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/335/GCA_900141335.1_10702_1_93	-	712
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.34085	64	-	FVYB01	58	5468	5287	3/10/17	3/18/17	Scaffold	SC	SAMEA2159848	GCA_900141345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/345/GCA_900141345.1_10702_1_95	-	717
Klebsiella pneumoniae	573	PRJNA353361	353361	Proteobacteria	Gammaproteobacteria	5.58002	57.2	-	MSZM01	155	5679	5432	5/9/17	5/22/17	Contig	New Jersey Medical School-Rutgers University	SAMN06200343	GCA_002120065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/065/GCA_002120065.1_ASM212006v1	-	KL064
Acinetobacter baumannii	470	PRJNA300270	300270	Proteobacteria	Gammaproteobacteria	3.94602	38.9	-	LNBZ01	113	3815	3657	11/13/15	3/18/17	Contig	Walter Reed Army Institute of Research	SAMN04254727	GCA_001443265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/443/265/GCA_001443265.1_ASM144326v1	23812239	MRSN4119
Pseudomonas aeruginosa	287	PRJNA184698	184698	Proteobacteria	Gammaproteobacteria	6.49684	66.4	-	MTLM01	125	6172	5994	6/14/17	6/19/17	Contig	Georgia Institute of Technology	SAMN06009457	GCA_002192775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/775/GCA_002192775.1_ASM219277v1	-	DPB_4
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.0478	39.5	-	CKYI01	67	2250	2026	3/21/15	3/11/17	Contig	SC	SAMEA1025267	GCA_001146485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/485/GCA_001146485.1_6830_3_14	-	SMRU1646
Escherichia coli BIDMC 64	1438672	PRJNA234152	234152	Proteobacteria	Gammaproteobacteria	5.35612	50.7	-	JMVA01	13	5597	5252	5/19/14	2/23/17	Scaffold	Broad Institute	SAMN02581285	GCA_000692455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/455/GCA_000692455.1_Esch_coli_BIDMC_64_V1	-	BIDMC 64
Mycobacterium tuberculosis TKK_04_0019	1397915	PRJNA218287	218287	Terrabacteria group	Actinobacteria	4.39274	65.6	-	JLTU01	4	4283	4102	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350470	GCA_000672975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/975/GCA_000672975.1_Myco_tube_TKK_04_0019_V1	-	TKK_04_0019
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.1497	37.8	-	MJOJ01	190	3176	3007	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03357925	GCA_001826315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/315/GCA_001826315.1_ASM182631v1	-	BCW_3935
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82712	52	-	CISM01	45	5016	4657	3/21/15	2/27/17	Contig	SC	SAMEA2067633	GCA_001082285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/285/GCA_001082285.1_10071_8_32	-	Gen-0032
Staphylococcus aureus M1512	1403894	PRJNA221440	221440	Terrabacteria group	Firmicutes	2.8719	32.9	-	JDBH01	23	2999	2838	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364033	GCA_000550225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/225/GCA_000550225.1_Stap_aure_M1512_V1	-	M1512
Staphylococcus aureus M1513	1403895	PRJNA221441	221441	Terrabacteria group	Firmicutes	2.83836	32.8	-	JDBI01	51	3003	2834	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364034	GCA_000550245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/245/GCA_000550245.1_Stap_aure_M1513_V1	-	M1513
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73716	52.1	-	CIOF01	48	4913	4558	3/21/15	2/27/17	Contig	SC	SAMEA2055247	GCA_001082325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/325/GCA_001082325.1_10060_6_11	-	SV211
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.87944	38	-	MJOL01	18	2878	2809	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03357928	GCA_001826335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/335/GCA_001826335.1_ASM182633v1	-	BCW_3938
Mycobacterium tuberculosis TKK_04_0021	1397916	PRJNA218288	218288	Terrabacteria group	Actinobacteria	4.41696	65.5	-	JLTT01	3	4294	4125	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350471	GCA_000672995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/672/995/GCA_000672995.1_Myco_tube_TKK_04_0021_V1	-	TKK_04_0021
Escherichia coli BIDMC 65	1438673	PRJNA234153	234153	Proteobacteria	Gammaproteobacteria	5.11453	50.6	-	JMVB01	9	5287	4969	5/19/14	2/23/17	Scaffold	Broad Institute	SAMN02581286	GCA_000692475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/475/GCA_000692475.1_Esch_coli_BIDMC_65_V1	-	BIDMC 65
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07214	39.5	-	CNRK02	163	2225	2023	3/23/15	3/11/17	Contig	SC	SAMEA1032702	GCA_001146525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/525/GCA_001146525.2_6999_1_9	-	R34-3192
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.87931	66	-	NIOM01	105	6637	6433	6/14/17	6/19/17	Contig	JCVI	SAMN07185683	GCA_002193655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/655/GCA_002193655.1_ASM219365v1	-	2320
Acinetobacter baumannii	470	PRJNA300270	300270	Proteobacteria	Gammaproteobacteria	3.94996	38.9	-	LNCV01	112	3820	3666	11/16/15	3/18/17	Contig	Walter Reed Army Institute of Research	SAMN04254728	GCA_001444215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/215/GCA_001444215.1_ASM144421v1	23812239	MRSN3941
Klebsiella pneumoniae	573	PRJNA353361	353361	Proteobacteria	Gammaproteobacteria	5.64611	57.1	-	MSZL01	159	5805	5538	5/9/17	5/22/17	Contig	New Jersey Medical School-Rutgers University	SAMN06200342	GCA_002120105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/105/GCA_002120105.1_ASM212010v1	-	KL015
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.05794	64.1	-	FVYD01	19	5093	4938	3/10/17	3/18/17	Scaffold	SC	SAMEA2259592	GCA_900141355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/355/GCA_900141355.1_11861_7_52	-	787
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.26487	64	-	FVYC01	46	5310	5108	3/10/17	3/18/17	Scaffold	SC	SAMEA2259699	GCA_900141365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/365/GCA_900141365.1_11861_8_26	-	894
Klebsiella pneumoniae	573	PRJNA359415	359415	Proteobacteria	Gammaproteobacteria	5.61447	57.1	-	MSSF01	578	-	-	5/19/17	5/19/17	Contig	S.Orsola-Malpighi University Hospital	SAMN06191597	GCA_002150525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/525/GCA_002150525.1_ASM215052v1	-	CNTD43
Acinetobacter baumannii	470	PRJNA300270	300270	Proteobacteria	Gammaproteobacteria	4.02865	38.8	-	LNCW01	117	3918	3760	11/16/15	3/18/17	Contig	Walter Reed Army Institute of Research	SAMN04254729	GCA_001444225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/225/GCA_001444225.1_ASM144422v1	23812239	MRSN5540
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.57554	66.1	-	NIOP01	94	6280	6091	6/14/17	6/19/17	Contig	JCVI	SAMN07185687	GCA_002193665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/665/GCA_002193665.1_ASM219366v1	-	2328
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12329	39.7	-	CMRJ01	74	2389	2139	3/23/15	3/10/17	Contig	SC	SAMEA2061734	GCA_001146545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/545/GCA_001146545.1_9803_8_4	-	19F
Escherichia coli BIDMC 70	1438674	PRJNA234158	234158	Proteobacteria	Gammaproteobacteria	5.1512	50.8	-	JMVC01	5	5351	5007	5/19/14	2/23/17	Scaffold	Broad Institute	SAMN02581291	GCA_000692495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/495/GCA_000692495.1_Esch_coli_BIDMC_70_V1	-	BIDMC 70
Mycobacterium tuberculosis TKK_04_0022	1397917	PRJNA218289	218289	Terrabacteria group	Actinobacteria	4.3996	65.6	-	JLTS01	2	4270	4115	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350472	GCA_000673015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/015/GCA_000673015.1_Myco_tube_TKK_04_0022_V1	-	TKK_04_0022
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.87872	38	-	MJOM01	14	2916	2831	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03357929	GCA_001826345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/345/GCA_001826345.1_ASM182634v1	-	BCW_3939
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72093	52	-	CIRR01	42	4880	4533	3/21/15	2/27/17	Contig	SC	SAMEA2067629	GCA_001082385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/385/GCA_001082385.1_10071_8_20	-	Gen-0020
Staphylococcus aureus M1514	1403896	PRJNA221442	221442	Terrabacteria group	Firmicutes	2.83465	32.8	-	JDBJ01	51	2980	2830	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364035	GCA_000550265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/265/GCA_000550265.1_Stap_aure_M1514_V1	-	M1514
Staphylococcus aureus M1515	1403897	PRJNA221443	221443	Terrabacteria group	Firmicutes	2.90869	32.9	-	JDBK01	22	3059	2893	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364036	GCA_000550285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/285/GCA_000550285.1_Stap_aure_M1515_V1	-	M1515
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.826	52	-	CISX01	43	5011	4653	3/21/15	2/27/17	Contig	SC	SAMEA2066335	GCA_001082425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/425/GCA_001082425.1_10071_8_46	-	Gen-0046
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.85956	37.9	-	MJON01	14	2879	2794	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03357930	GCA_001826375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/375/GCA_001826375.1_ASM182637v1	-	BCW_3940
Mycobacterium tuberculosis TKK_04_0023	1397918	PRJNA218290	218290	Terrabacteria group	Actinobacteria	4.39885	65.6	-	JLTR01	6	4292	4105	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350473	GCA_000673035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/035/GCA_000673035.1_Myco_tube_TKK_04_0023_V1	-	TKK_04_0023
Escherichia coli BIDMC 71	1438675	PRJNA234159	234159	Proteobacteria	Gammaproteobacteria	5.35733	50.6	-	JMVD01	18	5507	5108	5/19/14	2/23/17	Scaffold	Broad Institute	SAMN02581292	GCA_000692515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/515/GCA_000692515.1_Esch_coli_BIDMC_71_V1	-	BIDMC 71
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09253	39.7	-	CMBU01	80	2326	2116	3/21/15	3/4/17	Contig	SC	SAMEA1029378	GCA_001146605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/605/GCA_001146605.1_7004_7_66	-	SMRU2898
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.95579	66	-	NIOQ01	81	6611	6425	6/14/17	6/19/17	Contig	JCVI	SAMN07185686	GCA_002193675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/675/GCA_002193675.1_ASM219367v1	-	2330
Acinetobacter baumannii	470	PRJNA300270	300270	Proteobacteria	Gammaproteobacteria	4.02594	38.8	-	LNCX01	117	3919	3759	11/16/15	3/18/17	Contig	Walter Reed Army Institute of Research	SAMN04254730	GCA_001444255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/255/GCA_001444255.1_ASM144425v1	23812239	MRSN6269
Klebsiella pneumoniae	573	PRJNA359475	359475	Proteobacteria	Gammaproteobacteria	5.64232	57.1	-	MSSG01	338	5906	5206	5/19/17	6/15/17	Contig	S.Orsola-Malpighi University Hospital	SAMN06191598	GCA_002150595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/595/GCA_002150595.1_ASM215059v1	-	CNTD46
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.34797	64	-	FVYE01	43	5403	5191	3/10/17	3/18/17	Scaffold	SC	SAMEA2259702	GCA_900141375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/375/GCA_900141375.1_11861_8_27	-	897
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.32176	64	-	FVYF01	39	5395	5166	3/10/17	3/18/17	Scaffold	SC	SAMEA2259697	GCA_900141385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/385/GCA_900141385.1_11893_6_51	-	892
Klebsiella pneumoniae	573	PRJNA359477	359477	Proteobacteria	Gammaproteobacteria	5.62038	57.1	-	MSSI01	397	5919	5111	5/19/17	5/24/17	Contig	S.Orsola-Malpighi University Hospital	SAMN06191600	GCA_002150665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/665/GCA_002150665.1_ASM215066v1	-	CNTD88
Acinetobacter baumannii	470	PRJNA300270	300270	Proteobacteria	Gammaproteobacteria	3.95148	38.9	-	LNCY01	111	3820	3659	11/16/15	3/18/17	Contig	Walter Reed Army Institute of Research	SAMN04254731	GCA_001444265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/265/GCA_001444265.1_ASM144426v1	23812239	MRSN6273
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.75328	66	-	NIOO01	92	6469	6266	6/14/17	6/19/17	Contig	JCVI	SAMN07185681	GCA_002193685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/685/GCA_002193685.1_ASM219368v1	-	2325
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.98765	39.7	-	CNSL02	116	2135	1932	3/23/15	3/11/17	Contig	SC	SAMEA1032480	GCA_001146665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/665/GCA_001146665.2_6999_3_21	-	67094
Escherichia coli BIDMC 72	1438676	PRJNA234160	234160	Proteobacteria	Gammaproteobacteria	5.08926	50.6	-	JMVE01	11	5252	4885	5/19/14	2/23/17	Scaffold	Broad Institute	SAMN02581293	GCA_000692535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/535/GCA_000692535.1_Esch_coli_BIDMC_72_V1	-	BIDMC 72
Mycobacterium tuberculosis TKK_04_0024	1397919	PRJNA218291	218291	Terrabacteria group	Actinobacteria	4.3966	65.6	-	JLTQ01	3	4280	4114	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350474	GCA_000673055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/055/GCA_000673055.1_Myco_tube_TKK_04_0024_V1	-	TKK_04_0024
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.0744	37.8	-	MJOO01	26	3141	3048	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03357931	GCA_001826395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/395/GCA_001826395.1_ASM182639v1	-	BCW_3941
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73304	52	-	CINB01	58	4893	4533	3/21/15	2/27/17	Contig	SC	SAMEA2055894	GCA_001082485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/485/GCA_001082485.1_10060_5_29	-	A238
Staphylococcus aureus M1516	1403898	PRJNA221444	221444	Terrabacteria group	Firmicutes	2.90115	32.9	-	JDBL01	40	3041	2861	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364037	GCA_000550305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/305/GCA_000550305.1_Stap_aure_M1516_V1	-	M1516
Staphylococcus aureus M1518	1403899	PRJNA221445	221445	Terrabacteria group	Firmicutes	2.86917	32.8	-	JDBM01	57	3036	2862	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364038	GCA_000550325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/325/GCA_000550325.1_Stap_aure_M1518_V1	-	M1518
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82653	52	-	CITD01	40	5007	4648	3/21/15	2/27/17	Contig	SC	SAMEA2064162	GCA_001082505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/505/GCA_001082505.1_10071_8_51	-	Gen-0051
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.97345	37.9	-	MJOP01	18	3019	2936	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03357932	GCA_001826415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/415/GCA_001826415.1_ASM182641v1	-	BCW_3942
Mycobacterium tuberculosis TKK_04_0043	1397920	PRJNA218292	218292	Terrabacteria group	Actinobacteria	4.40513	65.6	-	JLTP01	2	4280	4114	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350475	GCA_000673075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/075/GCA_000673075.1_Myco_tube_TKK_04_0043_V1	-	TKK_04_0043
Escherichia coli BIDMC 73	1438677	PRJNA234161	234161	Proteobacteria	Gammaproteobacteria	5.0762	50.6	-	JMVF01	11	5271	4915	5/19/14	2/23/17	Scaffold	Broad Institute	SAMN02581294	GCA_000692555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/555/GCA_000692555.1_Esch_coli_BIDMC_73_V1	-	BIDMC 73
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.1083	39.6	-	CNQA02	194	2305	2090	3/23/15	3/5/17	Contig	SC	SAMEA1032434	GCA_001146785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/785/GCA_001146785.2_6952_4_7	-	438180
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.86787	66.1	-	NIOL01	125	6638	6413	6/14/17	6/19/17	Contig	JCVI	SAMN07185684	GCA_002193735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/735/GCA_002193735.1_ASM219373v1	-	2253
Acinetobacter baumannii	470	PRJNA296464	296464	Proteobacteria	Gammaproteobacteria	3.84454	39.1	-	LKJZ01	203	3692	3484	11/19/15	3/18/17	Contig	Texas Tech University	SAMN04099660	GCA_001446715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/715/GCA_001446715.1_ASM144671v1	26824353	TTU2014-131AME
Klebsiella pneumoniae	573	PRJNA369191	369191	Proteobacteria	Gammaproteobacteria	5.839	56.6	-	MUDD01	96	5960	5643	5/22/17	5/24/17	Contig	FAMERP	SAMN06279416	GCA_002154825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/825/GCA_002154825.1_ASM215482v1	-	SJRP/Kp10
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.08271	64.2	-	FVYG01	11	5096	4987	3/10/17	3/18/17	Scaffold	SC	SAMEA2259703	GCA_900141395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/395/GCA_900141395.1_11893_6_55	-	898
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15171	64.2	-	FVYH01	20	5185	5031	3/10/17	3/18/17	Scaffold	SC	SAMEA2259705	GCA_900141405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/405/GCA_900141405.1_11893_6_57	-	900
Klebsiella pneumoniae	573	PRJNA361484	361484	Proteobacteria	Gammaproteobacteria	5.555	57	-	NGJM01	171	5565	5269	5/24/17	5/30/17	Contig	University of Sao Paulo	SAMN06972166	GCA_002157345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/345/GCA_002157345.1_ASM215734v1	-	ICBKpBL-III-02(1)
Acinetobacter baumannii	470	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	3.99054	39	-	LORJ01	3	3812	3594	12/21/15	3/19/17	Contig	US Food and Drug Administration 	SAMN03996270	GCA_001471855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/855/GCA_001471855.1_ASM147185v1	-	FDAARGOS_123
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.29499	66.6	-	NION01	70	5954	5791	6/14/17	6/19/17	Contig	JCVI	SAMN07185682	GCA_002193745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/745/GCA_002193745.1_ASM219374v1	-	2321
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08979	39.6	-	CNNI02	162	2257	2053	3/23/15	3/11/17	Contig	SC	SAMEA1032505	GCA_001146865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/865/GCA_001146865.2_6925_1_49	-	R34-3030
Escherichia coli BIDMC 74	1438678	PRJNA234162	234162	Proteobacteria	Gammaproteobacteria	5.02714	50.7	-	JMVG01	13	5143	4860	5/19/14	2/23/17	Scaffold	Broad Institute	SAMN02581295	GCA_000692575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/575/GCA_000692575.1_Esch_coli_BIDMC_74_V1	-	BIDMC 74
Mycobacterium tuberculosis TKK_04_0047	1397921	PRJNA218293	218293	Terrabacteria group	Actinobacteria	4.42429	65.5	-	JLTO01	7	4292	4112	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350476	GCA_000673095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/095/GCA_000673095.1_Myco_tube_TKK_04_0047_V1	-	TKK_04_0047
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.96279	37.9	-	MJOQ01	19	3027	2946	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03357933	GCA_001826425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/425/GCA_001826425.1_ASM182642v1	-	BCW_3943
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72278	52	-	CIKZ01	45	4877	4516	3/21/15	2/27/17	Contig	SC	SAMEA2056958	GCA_001082525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/525/GCA_001082525.1_10071_3_20	-	TY589
Staphylococcus aureus M1519	1403900	PRJNA221446	221446	Terrabacteria group	Firmicutes	2.84298	32.9	-	JDBN01	19	2987	2814	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364039	GCA_000550345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/345/GCA_000550345.1_Stap_aure_M1519_V1	-	M1519
Staphylococcus aureus M1523	1403902	PRJNA221448	221448	Terrabacteria group	Firmicutes	2.9188	32.9	-	JDBO01	17	3067	2895	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364041	GCA_000550365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/365/GCA_000550365.1_Stap_aure_M1523_V1	-	M1523
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73449	52	-	CISK01	40	4893	4547	3/21/15	2/27/17	Contig	SC	SAMEA2064155	GCA_001082545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/545/GCA_001082545.1_10071_8_30	-	Gen-0030
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.09358	37.8	-	MJOR01	32	3216	3082	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03357934	GCA_001826455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/455/GCA_001826455.1_ASM182645v1	-	BCW_3944
Mycobacterium tuberculosis TKK_04_0048	1397922	PRJNA218294	218294	Terrabacteria group	Actinobacteria	4.39822	65.6	-	JLTN01	1	4280	4114	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350477	GCA_000673115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/115/GCA_000673115.1_Myco_tube_TKK_04_0048_V1	-	TKK_04_0048
Escherichia coli BIDMC 75	1438679	PRJNA234163	234163	Proteobacteria	Gammaproteobacteria	5.11777	50.8	-	JMVH01	15	5273	4917	5/19/14	2/23/17	Scaffold	Broad Institute	SAMN02581296	GCA_000692595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/595/GCA_000692595.1_Esch_coli_BIDMC_75_V1	-	BIDMC 75
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.14248	39.7	-	CODC02	201	2258	1988	3/22/15	3/6/17	Contig	SC	SAMEA1463164	GCA_001146885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/885/GCA_001146885.2_7622_4_10	-	LE4012
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.83132	66.2	-	NIOT01	101	6565	6358	6/14/17	6/19/17	Contig	JCVI	SAMN07185696	GCA_002193755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/755/GCA_002193755.1_ASM219375v1	-	2570
Acinetobacter baumannii	470	PRJNA299302	299302	Proteobacteria	Gammaproteobacteria	4.02759	39.2	-	LMZH01	89	3943	3662	1/6/16	3/19/17	Contig	University of Sao Paulo	SAMN04196791	GCA_001500225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/500/225/GCA_001500225.1_ASM150022v1	26998609	Ab03
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.8337	57	-	NDIT01	175	5995	5693	5/31/17	6/2/17	Contig	JCVI	SAMN06218027	GCA_002162395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/395/GCA_002162395.1_ASM216239v1	-	39384
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.92185	64.2	-	FVYK01	11	4952	4820	3/10/17	3/18/17	Scaffold	SC	SAMEA2259704	GCA_900141425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/425/GCA_900141425.1_11893_6_56	-	899
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.22905	64.1	-	FVYJ01	16	5253	5126	3/10/17	3/18/17	Scaffold	SC	SAMEA2259701	GCA_900141435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/435/GCA_900141435.1_11893_6_54	-	896
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.58877	57.2	-	NDIS01	147	5737	5473	5/31/17	6/2/17	Contig	JCVI	SAMN06218069	GCA_002162405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/405/GCA_002162405.1_ASM216240v1	-	40889
Acinetobacter baumannii	470	PRJNA308478	308478	Proteobacteria	Gammaproteobacteria	4.15033	39.2	-	LQRQ01	7	4041	3829	1/20/16	3/19/17	Contig	J. Craig Venter Institute	SAMN04396129	GCA_001518715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/715/GCA_001518715.1_ASM151871v1	-	HUMC1
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	7.00728	65.9	-	NIOU01	178	6674	6430	6/14/17	6/19/17	Contig	JCVI	SAMN07185695	GCA_002193765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/765/GCA_002193765.1_ASM219376v1	-	2623
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10713	39.5	-	CROM01	64	2315	2094	3/23/15	3/4/17	Contig	SC	SAMEA1025394	GCA_001146905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/905/GCA_001146905.1_6755_5_5	-	SMRU1157
Escherichia coli BIDMC 76	1438680	PRJNA234164	234164	Proteobacteria	Gammaproteobacteria	5.04001	50.8	-	JMVI01	10	5198	4870	5/19/14	2/23/17	Scaffold	Broad Institute	SAMN02581297	GCA_000692615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/615/GCA_000692615.1_Esch_coli_BIDMC_76_V1	-	BIDMC 76
Mycobacterium tuberculosis TKK_04_0005	1397923	PRJNA218295	218295	Terrabacteria group	Actinobacteria	4.44533	65.5	-	JLTM01	8	4304	4104	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350478	GCA_000673135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/135/GCA_000673135.1_Myco_tube_TKK_04_0005_V1	-	TKK_04_0005
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.95941	37.9	-	MJOS01	23	3039	2964	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03357935	GCA_001826475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/475/GCA_001826475.1_ASM182647v1	-	BCW_3945
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73278	52	-	CINR01	55	4889	4537	3/21/15	2/27/17	Contig	SC	SAMEA2058807	GCA_001082725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/725/GCA_001082725.1_10060_5_51	-	A263
Staphylococcus aureus M1524	1403903	PRJNA221449	221449	Terrabacteria group	Firmicutes	2.83626	32.8	-	JDBP01	47	2989	2827	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364042	GCA_000550385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/385/GCA_000550385.1_Stap_aure_M1524_V1	-	M1524
Staphylococcus aureus M1525	1403904	PRJNA221450	221450	Terrabacteria group	Firmicutes	2.84025	32.9	-	JDBQ01	57	2997	2830	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364043	GCA_000550405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/405/GCA_000550405.1_Stap_aure_M1525_V1	-	M1525
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72245	52	-	CITQ01	42	4895	4527	3/21/15	2/27/17	Contig	SC	SAMEA2066342	GCA_001082745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/745/GCA_001082745.1_10071_8_70	-	2010K-0553
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.90495	37.9	-	MJOT01	18	2950	2877	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03357980	GCA_001826495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/495/GCA_001826495.1_ASM182649v1	-	BCW_4252
Mycobacterium tuberculosis TKK_04_0007	1397924	PRJNA218296	218296	Terrabacteria group	Actinobacteria	4.40829	65.5	-	JLTL01	4	4289	4119	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350479	GCA_000673155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/155/GCA_000673155.1_Myco_tube_TKK_04_0007_V1	-	TKK_04_0007
Escherichia coli BIDMC 77	1438681	PRJNA234165	234165	Proteobacteria	Gammaproteobacteria	5.27778	50.6	-	JMVJ01	16	5424	5035	5/19/14	2/23/17	Scaffold	Broad Institute	SAMN02581298	GCA_000692635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/635/GCA_000692635.1_Esch_coli_BIDMC_77_V1	-	BIDMC 77
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.06342	39.6	-	CMDJ01	56	2265	2021	3/21/15	3/4/17	Contig	SC	SAMEA1029098	GCA_001146945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/945/GCA_001146945.1_7011_3_22	-	SMRU2758
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	7.42975	65.5	-	NIPD01	163	7275	7008	6/14/17	6/19/17	Contig	JCVI	SAMN07185578	GCA_002193815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/815/GCA_002193815.1_ASM219381v1	-	797
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	4.04087	39	-	LRMG01	261	3924	3737	1/22/16	3/19/17	Contig	JCVI	SAMN04432979	GCA_001531135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/135/GCA_001531135.1_ASM153113v1	-	ORABAshR
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.6358	57.1	-	NDIU01	151	5784	5529	5/31/17	6/2/17	Contig	JCVI	SAMN06218045	GCA_002162425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/425/GCA_002162425.1_ASM216242v1	-	39884
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.9452	64.3	-	FVYI01	16	4914	4778	3/10/17	3/24/17	Scaffold	SC	SAMEA2259700	GCA_900141445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/445/GCA_900141445.1_11893_6_53	-	895
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.29773	64	-	FVYL01	18	5404	5245	3/10/17	3/18/17	Scaffold	SC	SAMEA2259706	GCA_900141455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/455/GCA_900141455.1_11893_6_58	-	901
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.55326	57.3	-	NDIR01	145	5688	5395	5/31/17	6/2/17	Contig	JCVI	SAMN06218058	GCA_002162475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/162/475/GCA_002162475.1_ASM216247v1	-	41968
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.99934	39	-	LRMK02	189	3875	3720	1/22/16	3/22/17	Contig	JCVI	SAMN04432983	GCA_001531205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/205/GCA_001531205.2_ASM153120v2	-	ORABSC
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	7.17373	65.8	-	NIOX01	161	6974	6701	6/14/17	6/19/17	Contig	JCVI	SAMN07185692	GCA_002193825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/825/GCA_002193825.1_ASM219382v1	-	6005
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.17408	39.8	-	CKBD01	119	2336	2053	3/21/15	3/11/17	Contig	SC	SAMEA974661	GCA_001147205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/205/GCA_001147205.1_6259_8_18	-	type strain: N
Escherichia coli BIDMC 78	1438682	PRJNA234166	234166	Proteobacteria	Gammaproteobacteria	5.16763	50.8	-	JMVK01	7	5389	5007	5/19/14	2/23/17	Scaffold	Broad Institute	SAMN02581299	GCA_000692655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/655/GCA_000692655.1_Esch_coli_BIDMC_78_V1	-	BIDMC 78
Mycobacterium tuberculosis TKK_04_0008	1397925	PRJNA218297	218297	Terrabacteria group	Actinobacteria	4.41295	65.5	-	JLTK01	3	4294	4120	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350480	GCA_000673175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/175/GCA_000673175.1_Myco_tube_TKK_04_0008_V1	-	TKK_04_0008
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.05333	37.8	-	MJOU01	29	3119	3029	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03357981	GCA_001826505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/505/GCA_001826505.1_ASM182650v1	-	BCW_4253
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72687	52.1	-	CILA01	43	4897	4543	3/21/15	2/27/17	Contig	SC	SAMEA2059201	GCA_001082765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/765/GCA_001082765.1_10071_3_73	-	671076
Staphylococcus aureus M1528	1403906	PRJNA221452	221452	Terrabacteria group	Firmicutes	2.9144	32.9	-	JDBR01	26	3059	2883	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364045	GCA_000550425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/425/GCA_000550425.1_Stap_aure_M1528_V1	-	M1528
Staphylococcus aureus M1529	1403907	PRJNA221453	221453	Terrabacteria group	Firmicutes	2.88754	32.9	-	JDBS01	23	3029	2862	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364046	GCA_000550445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/445/GCA_000550445.1_Stap_aure_M1529_V1	-	M1529
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73998	52	-	CINJ01	44	4892	4543	3/21/15	2/27/17	Contig	SC	SAMEA2055902	GCA_001082785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/785/GCA_001082785.1_10060_5_53	-	A265
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.10465	37.8	-	MJOV01	28	3169	3077	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03357982	GCA_001826535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/535/GCA_001826535.1_ASM182653v1	-	BCW_4254
Mycobacterium tuberculosis TKK_04_0013	1397926	PRJNA218298	218298	Terrabacteria group	Actinobacteria	4.40672	65.6	-	JLTJ01	1	4285	4118	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350481	GCA_000673195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/195/GCA_000673195.1_Myco_tube_TKK_04_0013_V1	-	TKK_04_0013
Escherichia coli BIDMC 79	1438683	PRJNA234167	234167	Proteobacteria	Gammaproteobacteria	5.17543	50.8	-	JMVL01	14	5403	5021	5/19/14	2/23/17	Scaffold	Broad Institute	SAMN02581300	GCA_000692675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/675/GCA_000692675.1_Esch_coli_BIDMC_79_V1	-	BIDMC 79
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	1.96889	39.8	-	CLPR01	52	2158	1953	3/21/15	3/10/17	Contig	SC	SAMEA1028985	GCA_001147225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/225/GCA_001147225.1_6949_4_13	-	SMRU2485
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.83239	66	-	NIPE01	99	6506	6256	6/14/17	6/19/17	Contig	JCVI	SAMN07185581	GCA_002193835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/835/GCA_002193835.1_ASM219383v1	-	829
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.98521	39	-	LRMH02	184	3897	3684	1/22/16	3/22/17	Contig	JCVI	SAMN04432980	GCA_001531265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/265/GCA_001531265.2_ASM153126v2	-	ORABRicT
Klebsiella pneumoniae	573	PRJNA354908	354908	Proteobacteria	Gammaproteobacteria	5.68022	57.1	-	MQNA01	140	5750	5392	6/5/17	9/19/17	Contig	Istituto Superiore di Sanita	SAMN06054172	GCA_002166915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/915/GCA_002166915.1_ASM216691v1	28785421	Kp-KL49
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.29338	64.1	-	FVYP01	42	5330	5139	3/10/17	3/18/17	Scaffold	SC	SAMEA2275889	GCA_900141465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/465/GCA_900141465.1_12045_8_41	-	1163
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.84382	64.2	-	FVYO01	13	4823	4669	3/10/17	3/18/17	Scaffold	SC	SAMEA2275890	GCA_900141475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/475/GCA_900141475.1_12045_8_42	-	1164
Klebsiella pneumoniae	573	PRJNA354908	354908	Proteobacteria	Gammaproteobacteria	5.58082	57.3	-	MRBE01	115	5630	5271	6/5/17	9/19/17	Contig	Istituto Superiore di Sanita	SAMN06075450	GCA_002166955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/955/GCA_002166955.1_ASM216695v1	28785421	CIV-4
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.97964	39	-	LRMF02	185	3860	3706	1/22/16	3/22/17	Contig	JCVI	SAMN04432978	GCA_001531455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/531/455/GCA_001531455.2_ASM153145v2	-	ORAB23
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.89321	66.1	-	NIOY01	134	6682	6479	6/14/17	6/19/17	Contig	JCVI	SAMN07185691	GCA_002193845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/845/GCA_002193845.1_ASM219384v1	-	6007
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05506	39.7	-	CNVB02	174	2240	2009	3/22/15	3/11/17	Contig	SC	SAMEA1032700	GCA_001147305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/305/GCA_001147305.2_6999_6_9	-	268660
Escherichia coli CHS 68	1438684	PRJNA234237	234237	Proteobacteria	Gammaproteobacteria	5.27658	50.8	-	JMVM01	15	5493	5139	5/19/14	2/23/17	Scaffold	Broad Institute	SAMN02581370	GCA_000692695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/695/GCA_000692695.1_Esch_coli_CHS_68_V1	-	CHS 68
Mycobacterium tuberculosis TKK_04_0020	1397927	PRJNA218299	218299	Terrabacteria group	Actinobacteria	4.43149	65.6	-	JLTI01	5	4290	4096	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350482	GCA_000673215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/215/GCA_000673215.1_Myco_tube_TKK_04_0020_V1	-	TKK_04_0020
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.9353	37.9	-	MJOW01	23	2973	2878	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03357983	GCA_001826555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/555/GCA_001826555.1_ASM182655v1	-	BCW_4255
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69987	52.1	-	CIQT01	44	4846	4498	3/21/15	2/27/17	Contig	SC	SAMEA2059030	GCA_001082845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/845/GCA_001082845.1_10071_3_49	-	516981
Staphylococcus aureus M1530	1403908	PRJNA221454	221454	Terrabacteria group	Firmicutes	2.83301	32.8	-	JDBT01	56	2980	2827	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364047	GCA_000550465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/465/GCA_000550465.1_Stap_aure_M1530_V1	-	M1530
Staphylococcus aureus M1532	1403909	PRJNA221455	221455	Terrabacteria group	Firmicutes	2.87049	32.9	-	JDBU01	69	3039	2881	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364048	GCA_000550485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/485/GCA_000550485.1_Stap_aure_M1532_V1	-	M1532
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72169	52	-	CINX01	47	4882	4526	3/21/15	2/27/17	Contig	SC	SAMEA1964227	GCA_001082925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/925/GCA_001082925.1_10060_5_76	-	B1563
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.14282	37.9	-	MJOX01	34	3216	3130	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03357984	GCA_001826565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/565/GCA_001826565.1_ASM182656v1	-	BCW_4256
Mycobacterium tuberculosis TKK_04_0034	1397928	PRJNA218300	218300	Terrabacteria group	Actinobacteria	4.39804	65.6	-	JLTH01	2	4260	4111	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350483	GCA_000673235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/235/GCA_000673235.1_Myco_tube_TKK_04_0034_V1	-	TKK_04_0034
Escherichia coli CHS 69	1438685	PRJNA234238	234238	Proteobacteria	Gammaproteobacteria	5.38874	50.7	-	JMVN01	12	5518	5146	5/19/14	2/23/17	Scaffold	Broad Institute	SAMN02581371	GCA_000692715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/715/GCA_000692715.1_Esch_coli_CHS_69_V1	-	CHS 69
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06494	39.6	-	CNPG02	134	2258	2051	3/23/15	3/5/17	Contig	SC	SAMEA1032663	GCA_001147365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/365/GCA_001147365.2_6930_8_11	-	R34-3017
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.91059	66	-	NIOW01	123	6661	6413	6/14/17	6/19/17	Contig	JCVI	SAMN07185693	GCA_002193895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/895/GCA_002193895.1_ASM219389v1	-	6003
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.83415	38.9	-	LRMJ02	151	3694	3534	1/22/16	3/22/17	Contig	JCVI	SAMN04432982	GCA_001541025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/025/GCA_001541025.2_ASM154102v2	-	ORAB6b
Klebsiella pneumoniae	573	PRJNA354908	354908	Proteobacteria	Gammaproteobacteria	5.72443	57.1	-	MQUU01	169	5798	5422	6/5/17	9/19/17	Contig	Istituto Superiore di Sanita	SAMN06099181	GCA_002166965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/965/GCA_002166965.1_ASM216696v1	28785421	KH43
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.21626	64.2	-	FVYM01	30	5282	5118	3/10/17	3/18/17	Scaffold	SC	SAMEA2275827	GCA_900141485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/485/GCA_900141485.1_12045_8_45	-	1101
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.08625	64.3	-	FVYQ01	21	5092	4958	3/10/17	3/18/17	Scaffold	SC	SAMEA2275830	GCA_900141495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/495/GCA_900141495.1_12045_8_46	-	1104
Klebsiella pneumoniae	573	PRJNA354908	354908	Proteobacteria	Gammaproteobacteria	5.58619	57.2	-	MQUT01	179	5605	5301	6/5/17	8/14/17	Contig	Istituto Superiore di Sanita	SAMN06099179	GCA_002167035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/035/GCA_002167035.1_ASM216703v1	28785421	HH150820806-UK
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.83475	38.9	-	LRME02	158	3688	3536	1/22/16	3/22/17	Contig	JCVI	SAMN04432977	GCA_001541035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/035/GCA_001541035.2_ASM154103v2	-	ORAB21
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	7.22444	65.7	-	NIPF01	128	6925	6672	6/14/17	6/19/17	Contig	JCVI	SAMN07185577	GCA_002193905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/905/GCA_002193905.1_ASM219390v1	-	833
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.08728	39.5	-	CMKE01	52	2288	2067	3/22/15	3/10/17	Contig	SC	SAMEA1029215	GCA_001147385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/385/GCA_001147385.1_7054_4_11	-	SMRU3035
Escherichia coli CHS 77	1438686	PRJNA234246	234246	Proteobacteria	Gammaproteobacteria	5.06136	50.7	-	JMVO01	7	5242	4949	5/19/14	2/23/17	Scaffold	Broad Institute	SAMN02581379	GCA_000692735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/735/GCA_000692735.1_Esch_coli_CHS_77_V1	-	CHS 77
Mycobacterium tuberculosis TKK_04_0036	1397929	PRJNA218301	218301	Terrabacteria group	Actinobacteria	4.42097	65.5	-	JLTG01	4	4299	4122	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350484	GCA_000673255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/255/GCA_000673255.1_Myco_tube_TKK_04_0036_V1	-	TKK_04_0036
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.93555	38	-	MJOY01	14	2956	2888	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03357985	GCA_001826595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/595/GCA_001826595.1_ASM182659v1	-	BCW_4257
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72259	52.1	-	CINK01	45	4896	4548	3/21/15	2/27/17	Contig	SC	SAMEA2058629	GCA_001082945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/945/GCA_001082945.1_10060_5_39	-	A249
Staphylococcus aureus M1534	1403910	PRJNA221456	221456	Terrabacteria group	Firmicutes	2.83087	32.8	-	JDBV01	46	2966	2826	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364049	GCA_000550505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/505/GCA_000550505.1_Stap_aure_M1534_V1	-	M1534
Staphylococcus aureus M1535	1403911	PRJNA221457	221457	Terrabacteria group	Firmicutes	2.84242	32.8	-	JDBW01	44	2987	2813	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364050	GCA_000550525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/525/GCA_000550525.1_Stap_aure_M1535_V1	-	M1535
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71205	52.1	-	CINO01	53	4876	4519	3/21/15	2/27/17	Contig	SC	SAMEA2056812	GCA_001082965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/965/GCA_001082965.1_10060_5_46	-	A257
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.09697	37.9	-	MJOZ01	25	3137	3059	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03357986	GCA_001826615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/615/GCA_001826615.1_ASM182661v1	-	BCW_4258
Mycobacterium tuberculosis TKK_04_0038	1397930	PRJNA218302	218302	Terrabacteria group	Actinobacteria	4.40172	65.6	-	JLTF01	3	4284	4111	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350485	GCA_000673275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/275/GCA_000673275.1_Myco_tube_TKK_04_0038_V1	-	TKK_04_0038
Escherichia coli MGH 57	1438687	PRJNA234256	234256	Proteobacteria	Gammaproteobacteria	5.09382	50.7	-	JMVP01	14	5263	4910	5/19/14	2/23/17	Scaffold	Broad Institute	SAMN02581389	GCA_000692755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/755/GCA_000692755.1_Esch_coli_MGH_57_V1	-	MGH 57
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.04722	39.7	-	CLOM01	67	2258	2047	3/21/15	3/11/17	Contig	SC	SAMEA1029072	GCA_001147405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/405/GCA_001147405.1_6949_2_13	-	SMRU2437
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.46053	66.4	-	NIPJ01	71	6163	6006	6/14/17	6/19/17	Contig	JCVI	SAMN07185688	GCA_002193915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/915/GCA_002193915.1_ASM219391v1	-	CL297
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.83646	39	-	LRMI02	176	3696	3539	1/22/16	3/22/17	Contig	JCVI	SAMN04432981	GCA_001541045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/045/GCA_001541045.2_ASM154104v2	-	ORABMayT
Klebsiella pneumoniae	573	PRJNA354908	354908	Proteobacteria	Gammaproteobacteria	5.49869	57.3	-	MQUW01	128	5493	5203	6/5/17	9/19/17	Contig	Istituto Superiore di Sanita	SAMN06099239	GCA_002167065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/065/GCA_002167065.1_ASM216706v1	28785421	H151300628-UK
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16287	64.1	-	FVYT01	6	5258	5088	3/10/17	3/18/17	Scaffold	SC	SAMEA2275629	GCA_900141505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/505/GCA_900141505.1_12078_1_64	-	1167
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.1627	64.1	-	FVYN01	4	5259	5091	3/10/17	3/18/17	Scaffold	SC	SAMEA2275628	GCA_900141515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/515/GCA_900141515.1_12078_1_63	-	1166
Klebsiella pneumoniae	573	PRJNA354908	354908	Proteobacteria	Gammaproteobacteria	5.54134	57.3	-	MQUZ01	188	5569	5256	6/5/17	9/19/17	Contig	Istituto Superiore di Sanita	SAMN06099676	GCA_002167105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/105/GCA_002167105.1_ASM216710v1	28785421	H154440769
Acinetobacter baumannii P630	1431338	PRJEB4996	273825	Proteobacteria	Gammaproteobacteria	3.89066	38.9	-	CBYG01	46	3692	3541	1/28/15	3/19/17	Contig	CEBITEC	SAMEA3158474	GCA_001544395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/395/GCA_001544395.1_P630	-	P630
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.87741	66	-	NIOV01	109	6624	6380	6/14/17	6/19/17	Contig	JCVI	SAMN07185694	GCA_002193925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/925/GCA_002193925.1_ASM219392v1	-	2671
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.06451	39.7	-	CRVV01	147	2302	2056	3/23/15	3/10/17	Contig	SC	SAMEA1026048	GCA_001147485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/485/GCA_001147485.1_6805_7_7	-	SMRU1736
Escherichia coli MGH 58	1438688	PRJNA234257	234257	Proteobacteria	Gammaproteobacteria	5.42516	50.7	-	JMVQ01	7	5557	5192	5/19/14	2/23/17	Scaffold	Broad Institute	SAMN02581390	GCA_000692775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/775/GCA_000692775.1_Esch_coli_MGH_58_V1	-	MGH 58
Mycobacterium tuberculosis TKK_04_0039	1397931	PRJNA218303	218303	Terrabacteria group	Actinobacteria	4.39887	65.6	-	JLTE01	2	4276	4105	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350486	GCA_000673295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/295/GCA_000673295.1_Myco_tube_TKK_04_0039_V1	-	TKK_04_0039
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.98017	37.9	-	MJPA01	26	3008	2925	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03357987	GCA_001826635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/635/GCA_001826635.1_ASM182663v1	-	BCW_4259
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70903	52.1	-	CIVD01	44	4874	4529	3/21/15	2/27/17	Contig	SC	SAMEA2067821	GCA_001083325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/325/GCA_001083325.1_10209_5_36	-	UI2001
Staphylococcus aureus M1538	1403913	PRJNA221459	221459	Terrabacteria group	Firmicutes	2.86754	32.9	-	JDBX01	58	3010	2839	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364052	GCA_000550545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/545/GCA_000550545.1_Stap_aure_M1538_V1	-	M1538
Staphylococcus aureus M1541	1403915	PRJNA221461	221461	Terrabacteria group	Firmicutes	2.83454	32.9	-	JDBY01	55	3002	2833	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364054	GCA_000550565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/565/GCA_000550565.1_Stap_aure_M1541_V1	-	M1541
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93326	51.8	-	CJNH01	54	5143	4745	3/21/15	2/27/17	Contig	SC	SAMEA2149061	GCA_001084585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/585/GCA_001084585.1_10608_2_35	-	2012-004687
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.01318	37.9	-	MJPB01	34	3052	2972	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03357988	GCA_001826655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/655/GCA_001826655.1_ASM182665v1	-	BCW_4260
Mycobacterium tuberculosis TKK_04_0040	1397932	PRJNA218304	218304	Terrabacteria group	Actinobacteria	4.41599	65.6	-	JLTD01	3	4289	4122	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350487	GCA_000673315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/315/GCA_000673315.1_Myco_tube_TKK_04_0040_V1	-	TKK_04_0040
Escherichia coli UCI 51	1438689	PRJNA234124	234124	Proteobacteria	Gammaproteobacteria	5.31384	50.8	-	JMVR01	16	5568	5215	5/19/14	2/23/17	Scaffold	Broad Institute	SAMN02581257	GCA_000692795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/795/GCA_000692795.1_Esch_coli_UCI_51_V1	-	UCI 51
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.12309	39.6	-	CKCL01	54	2352	2125	3/21/15	3/11/17	Contig	SC	SAMEA1023977	GCA_001147505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/505/GCA_001147505.1_6593_4_23	-	22F
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.72724	66.2	-	NIOS01	93	6409	6216	6/14/17	6/19/17	Contig	JCVI	SAMN07185680	GCA_002193975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/975/GCA_002193975.1_ASM219397v1	-	2357
Acinetobacter baumannii	470	PRJNA305394	305394	Proteobacteria	Gammaproteobacteria	3.93794	39	-	LOHD01	196	3837	3685	2/26/16	3/19/17	Contig	University of Leuven - KU Leuven	SAMN04325103	GCA_001576615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/615/GCA_001576615.1_ASM157661v1	-	NCTC 13423
Klebsiella pneumoniae	573	PRJNA354908	354908	Proteobacteria	Gammaproteobacteria	5.35848	57.4	-	MQVA01	126	5331	5079	6/5/17	9/19/17	Contig	Istituto Superiore di Sanita	SAMN06099714	GCA_002167135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/135/GCA_002167135.1_ASM216713v1	28785421	H151440671
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.11608	64.1	-	FSQN01	8	5136	5021	12/14/16	3/21/17	Scaffold	SC	SAMEA2275862	GCA_900141525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/525/GCA_900141525.1_12082_5_83	-	1136
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.08665	64.3	-	FSQP01	23	5098	4961	12/14/16	3/21/17	Scaffold	SC	SAMEA2275825	GCA_900141535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/535/GCA_900141535.1_12163_2_68	-	1099
Klebsiella pneumoniae	573	PRJNA354908	354908	Proteobacteria	Gammaproteobacteria	5.43956	57.4	-	MQVB01	130	5414	5162	6/5/17	9/19/17	Contig	Istituto Superiore di Sanita	SAMN06099718	GCA_002167145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/145/GCA_002167145.1_ASM216714v1	28785421	H155360912
Acinetobacter baumannii	470	PRJNA307212	307212	Proteobacteria	Gammaproteobacteria	3.94213	38.8	-	LQCP01	53	3806	3669	4/8/16	3/20/17	Contig	Zhejiang University	SAMN04376871	GCA_001617895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/895/GCA_001617895.1_ASM161789v1	-	2015ZJAB4
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.98742	66	-	NIPC01	184	6768	6536	6/14/17	6/19/17	Contig	JCVI	SAMN07185582	GCA_002193995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/995/GCA_002193995.1_ASM219399v1	-	759
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09579	39.6	-	CKGY01	44	2303	2060	3/21/15	3/10/17	Contig	SC	SAMEA1023721	GCA_001147525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/525/GCA_001147525.1_6631_1_7	-	14
Escherichia coli UCI 53	1438691	PRJNA234126	234126	Proteobacteria	Gammaproteobacteria	4.93844	50.5	-	JMVS01	13	5123	4727	5/19/14	2/23/17	Scaffold	Broad Institute	SAMN02581259	GCA_000692815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/815/GCA_000692815.1_Esch_coli_UCI_53_V1	-	UCI 53
Mycobacterium tuberculosis TKK_04_0044	1397933	PRJNA218305	218305	Terrabacteria group	Actinobacteria	4.41454	65.6	-	JLTC01	3	4290	4104	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350488	GCA_000673335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/335/GCA_000673335.1_Myco_tube_TKK_04_0044_V1	-	TKK_04_0044
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.1488	37.9	-	MJPC01	29	3207	3098	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03357989	GCA_001826675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/675/GCA_001826675.1_ASM182667v1	-	BCW_4261
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.80273	52.1	-	CJYF01	40	4993	4634	3/21/15	2/27/17	Contig	SC	SAMEA2057365	GCA_001085225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/225/GCA_001085225.1_9953_5_62	-	KM1647
Staphylococcus aureus M1542	1403916	PRJNA221462	221462	Terrabacteria group	Firmicutes	2.8671	32.9	-	JDBZ01	28	3006	2841	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364055	GCA_000550585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/585/GCA_000550585.1_Stap_aure_M1542_V1	-	M1542
Staphylococcus aureus M1545	1403918	PRJNA221464	221464	Terrabacteria group	Firmicutes	2.83553	32.8	-	JDCA01	22	2962	2791	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364057	GCA_000550605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/605/GCA_000550605.1_Stap_aure_M1545_V1	-	M1545
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7009	52.1	-	CJKV01	42	4862	4498	3/21/15	2/27/17	Contig	SC	SAMEA1930149	GCA_001085325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/325/GCA_001085325.1_10593_2_44	-	E98-8120
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.16551	37.8	-	MJPE01	35	3228	3132	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03357991	GCA_001826715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/715/GCA_001826715.1_ASM182671v1	-	BCW_4263
Mycobacterium tuberculosis TKK_04_0045	1397934	PRJNA218306	218306	Terrabacteria group	Actinobacteria	4.41355	65.5	-	JLTB01	3	4295	4123	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350489	GCA_000673355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/355/GCA_000673355.1_Myco_tube_TKK_04_0045_V1	-	TKK_04_0045
Escherichia coli UCI 57	1438693	PRJNA234130	234130	Proteobacteria	Gammaproteobacteria	5.09459	50.6	-	JMVT01	8	5094	4781	5/19/14	2/23/17	Scaffold	Broad Institute	SAMN02581263	GCA_000692835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/835/GCA_000692835.1_Esch_coli_UCI_57_V1	-	UCI 57
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08485	39.6	-	CNOS02	156	2284	2079	3/23/15	3/5/17	Contig	SC	SAMEA1032679	GCA_001147585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/585/GCA_001147585.2_6930_8_14	-	R34-3020
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.56158	66.3	-	NIPB01	70	6227	6070	6/14/17	6/19/17	Contig	JCVI	SAMN07185583	GCA_002194005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/005/GCA_002194005.1_ASM219400v1	-	717
Acinetobacter baumannii	470	PRJNA279596	279596	Proteobacteria	Gammaproteobacteria	3.98171	38.8901	plasmid pAB0057:NZ_CM003909.1/CM003909.1	LAPU01	72	3890	3715	4/8/16	3/20/17	Contig	Rice University	SAMN03450127	GCA_001618125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/618/125/GCA_001618125.1_ASM161812v1	26488727	AB210M
Klebsiella pneumoniae	573	PRJNA350744	350744	Proteobacteria	Gammaproteobacteria	5.58514	57.3	-	MOSJ01	439	5699	5354	6/6/17	6/8/17	Contig	Beijing Institute of Genomics	SAMN05945901	GCA_002173825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/825/GCA_002173825.1_ASM217382v1	-	402
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.084	64.2	-	FVYR01	23	5097	4956	3/10/17	3/18/17	Scaffold	SC	SAMEA2275826	GCA_900141545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/545/GCA_900141545.1_12082_5_73	-	1100
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.18114	64	-	FSQM01	22	5225	5032	12/14/16	3/22/17	Scaffold	SC	SAMEA2275832	GCA_900141555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/555/GCA_900141555.1_12082_5_74	-	1106
Klebsiella pneumoniae	573	PRJNA350747	350747	Proteobacteria	Gammaproteobacteria	5.50926	57.3	-	MOSM01	375	5655	5214	6/6/17	6/8/17	Contig	Beijing Institute of Genomics	SAMN05945909	GCA_002173875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/875/GCA_002173875.1_ASM217387v1	-	759
Acinetobacter baumannii	470	PRJNA312881	312881	Proteobacteria	Gammaproteobacteria	3.91106	38.9	-	LTAJ01	91	3795	3581	4/20/16	3/20/17	Contig	Christian Medical College	SAMN04508171	GCA_001624975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/624/975/GCA_001624975.1_ASM162497v1	-	VB22595
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.61819	66.3	-	NIPI01	90	6310	6138	6/14/17	6/19/17	Contig	JCVI	SAMN07185579	GCA_002194025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/025/GCA_002194025.1_ASM219402v1	-	838
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.17383	39.5	-	CLNF01	79	2425	2189	3/21/15	3/14/17	Contig	SC	SAMEA1028677	GCA_001147685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/685/GCA_001147685.1_6938_8_1	-	SMRU2713
Escherichia coli UCI 58	1438694	PRJNA234131	234131	Proteobacteria	Gammaproteobacteria	5.12999	50.6	-	JMVU01	12	5175	4872	5/19/14	2/23/17	Scaffold	Broad Institute	SAMN02581264	GCA_000692855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/855/GCA_000692855.1_Esch_coli_UCI_58_V1	-	UCI 58
Mycobacterium tuberculosis TKK_04_0046	1397935	PRJNA218307	218307	Terrabacteria group	Actinobacteria	4.39986	65.6	-	JLTA01	3	4277	4106	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350490	GCA_000673375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/375/GCA_000673375.1_Myco_tube_TKK_04_0046_V1	-	TKK_04_0046
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.96728	37.9	-	MJPF01	14	3010	2919	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03357992	GCA_001826735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/735/GCA_001826735.1_ASM182673v1	-	BCW_4264
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93437	51.8	-	CJWB01	64	5130	4744	3/21/15	2/27/17	Contig	SC	SAMEA2058433	GCA_001085365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/365/GCA_001085365.1_9870_8_76	-	01-2012-002175
Staphylococcus aureus M1550	1403923	PRJNA221469	221469	Terrabacteria group	Firmicutes	2.83984	32.8	-	JDCB01	59	2981	2815	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364062	GCA_000550625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/625/GCA_000550625.1_Stap_aure_M1550_V1	-	M1550
Staphylococcus aureus M1551	1403924	PRJNA221470	221470	Terrabacteria group	Firmicutes	2.90038	32.9	-	JDCC01	42	3063	2882	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364063	GCA_000550645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/645/GCA_000550645.1_Stap_aure_M1551_V1	-	M1551
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74802	52.1	-	CJSK01	46	4916	4543	3/21/15	2/27/17	Contig	SC	SAMEA1903857	GCA_001085745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/745/GCA_001085745.1_9475_6_28	-	1020791
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.00282	37.9	-	MJPG01	13	3063	2971	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03357993	GCA_001826755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/755/GCA_001826755.1_ASM182675v1	-	BCW_4265
Mycobacterium tuberculosis TKK_04_0042	1397936	PRJNA218308	218308	Terrabacteria group	Actinobacteria	4.41091	65.6	-	JLSZ01	3	4300	4129	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350491	GCA_000673395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/395/GCA_000673395.1_Myco_tube_TKK_04_0042_V1	-	TKK_04_0042
Escherichia coli UCI 65	1438695	PRJNA234138	234138	Proteobacteria	Gammaproteobacteria	5.55429	50.5	-	JMVV01	12	5625	5225	5/19/14	2/23/17	Scaffold	Broad Institute	SAMN02581271	GCA_000692875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/875/GCA_000692875.1_Esch_coli_UCI_65_V1	-	UCI 65
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09729	39.7	-	CRKJ01	102	2338	2132	3/23/15	3/11/17	Contig	SC	SAMEA1025632	GCA_001147705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/705/GCA_001147705.1_6753_3_4	-	SMRU1516
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.82139	65.9	-	NIPH01	104	6507	6315	6/14/17	6/19/17	Contig	JCVI	SAMN07185576	GCA_002194055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/055/GCA_002194055.1_ASM219405v1	-	837
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	4.13452	38.9	-	LXJV01	551	4356	3732	5/6/16	3/20/17	Contig	Umm Al-Qura University	SAMN04924778	GCA_001640065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/065/GCA_001640065.1_ASM164006v1	-	AB217
Klebsiella pneumoniae	573	PRJNA350753	350753	Proteobacteria	Gammaproteobacteria	5.58306	57.2	-	MOSO01	746	5825	5170	6/6/17	6/8/17	Contig	Beijing Institute of Genomics	SAMN05945919	GCA_002173885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/885/GCA_002173885.1_ASM217388v1	-	1479
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.17222	64.2	-	FSQO01	35	5247	5041	12/14/16	3/21/17	Scaffold	SC	SAMEA2275824	GCA_900141565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/565/GCA_900141565.1_12163_2_67	-	1098
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.52647	64.2	-	FVYU01	37	5590	5375	3/10/17	3/18/17	Scaffold	SC	SAMEA2275828	GCA_900141575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/575/GCA_900141575.1_12163_2_69	-	1102
Klebsiella pneumoniae	573	PRJNA350742	350742	Proteobacteria	Gammaproteobacteria	5.55839	57.1	-	MOSH01	1230	6048	5105	6/6/17	6/8/17	Contig	Beijing Institute of Genomics	SAMN05945852	GCA_002173905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/905/GCA_002173905.1_ASM217390v1	-	337
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	4.06501	38.9	-	LXJW01	124	3977	3764	5/6/16	3/20/17	Contig	Umm Al-Qura University	SAMN04924779	GCA_001640075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/075/GCA_001640075.1_ASM164007v1	-	AB250
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.75291	66.2	-	NIOR01	118	6524	6322	6/14/17	6/19/17	Contig	JCVI	SAMN07185685	GCA_002194075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/075/GCA_002194075.1_ASM219407v1	-	2353
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07543	39.7	-	CRKF01	63	2291	2080	3/23/15	3/11/17	Contig	SC	SAMEA1025649	GCA_001147805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/805/GCA_001147805.1_6753_3_3	-	SMRU1515
Escherichia coli UCI 66	1438696	PRJNA234139	234139	Proteobacteria	Gammaproteobacteria	5.2599	50.6	-	JMVW01	13	5441	5066	5/19/14	2/23/17	Scaffold	Broad Institute	SAMN02581272	GCA_000692895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/692/895/GCA_000692895.1_Esch_coli_UCI_66_V1	-	UCI 66
Mycobacterium tuberculosis TKK_04_0037	1397937	PRJNA218309	218309	Terrabacteria group	Actinobacteria	4.4004	65.6	-	JLSY01	3	4280	4113	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350492	GCA_000673415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/415/GCA_000673415.1_Myco_tube_TKK_04_0037_V1	-	TKK_04_0037
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.02859	37.8	-	MJPH01	19	3102	3013	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03357994	GCA_001826765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/765/GCA_001826765.1_ASM182676v1	-	BCW_4266
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73294	52	-	CJWS01	46	4885	4524	3/21/15	2/27/17	Contig	SC	SAMEA2056356	GCA_001085925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/925/GCA_001085925.1_9953_5_12	-	A278
Staphylococcus aureus M1552	1403925	PRJNA221471	221471	Terrabacteria group	Firmicutes	2.86012	32.9	-	JDCD01	18	2992	2824	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364064	GCA_000550665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/665/GCA_000550665.1_Stap_aure_M1552_V1	-	M1552
Staphylococcus aureus M1553	1403926	PRJNA221472	221472	Terrabacteria group	Firmicutes	2.85722	32.9	-	JDCE01	22	2995	2826	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364065	GCA_000550685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/685/GCA_000550685.1_Stap_aure_M1553_V1	-	M1553
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70843	52.1	-	CIWC01	50	4865	4515	3/21/15	2/27/17	Contig	SC	SAMEA2067829	GCA_001086945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/945/GCA_001086945.1_10209_5_60	-	UI3396
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.00458	37.8	-	MJPI01	22	3051	2973	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03357995	GCA_001826795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/795/GCA_001826795.1_ASM182679v1	-	BCW_4267
Mycobacterium tuberculosis TKK_04_0029	1397938	PRJNA218310	218310	Terrabacteria group	Actinobacteria	4.44545	65.5	-	JLSX01	5	4307	4122	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350493	GCA_000673435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/435/GCA_000673435.1_Myco_tube_TKK_04_0029_V1	-	TKK_04_0029
Escherichia coli D6-113.11	1400022	PRJEB4682	227249	Proteobacteria	Gammaproteobacteria	5.09717	50.5	-	CCCO01	48	5274	4929	5/11/14	2/23/17	Scaffold	INRA DE TOURS	SAMEA3139075	GCA_000731355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/355/GCA_000731355.1_V1	-	D6-113.11
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05908	39.6	-	CNXW02	168	2216	2021	3/23/15	3/5/17	Contig	SC	SAMEA1463060	GCA_001147825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/825/GCA_001147825.2_7553_4_18	-	ND6139
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.3331	66.5	-	NIOZ01	66	6043	5891	6/14/17	6/19/17	Contig	JCVI	SAMN07185690	GCA_002194085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/085/GCA_002194085.1_ASM219408v1	-	6010
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	3.80522	39.6	-	LUUX01	531	3679	3458	5/23/16	3/20/17	Contig	University of Sao Paulo	SAMN04549228	GCA_001649595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/595/GCA_001649595.1_ASM164959v1	-	LIM1819
Klebsiella pneumoniae	573	PRJNA350750	350750	Proteobacteria	Gammaproteobacteria	5.53497	57.2	-	MOSN01	478	5661	5197	6/6/17	6/8/17	Contig	Beijing Institute of Genomics	SAMN05945914	GCA_002173955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/955/GCA_002173955.1_ASM217395v1	-	1456
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.57639	64.2	-	FVYV01	39	5644	5476	3/10/17	3/18/17	Scaffold	SC	SAMEA2275829	GCA_900141585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/585/GCA_900141585.1_12163_2_70	-	1103
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.88644	64.3	-	FVYS01	58	4860	4730	3/10/17	3/18/17	Scaffold	SC	SAMEA2275888	GCA_900141595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/595/GCA_900141595.1_12082_5_96	-	1162
Klebsiella pneumoniae	573	PRJNA350746	350746	Proteobacteria	Gammaproteobacteria	5.18706	57.7	-	MOSL01	364	5230	4898	6/6/17	6/8/17	Contig	Beijing Institute of Genomics	SAMN05945903	GCA_002173965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/965/GCA_002173965.1_ASM217396v1	-	824
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	3.75222	39.5	-	LUUW01	561	3669	3452	5/23/16	3/20/17	Contig	University of Sao Paulo	SAMN04549227	GCA_001649615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/615/GCA_001649615.1_ASM164961v1	-	LIM565
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	7.05998	65.7	-	NIPA01	118	6780	6576	6/14/17	6/19/17	Contig	JCVI	SAMN07185689	GCA_002194095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/095/GCA_002194095.1_ASM219409v1	-	6014
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06187	39.5	-	CNXN02	214	2218	2029	3/22/15	3/5/17	Contig	SC	SAMEA1032740	GCA_001147985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/985/GCA_001147985.2_7001_3_20	-	R34-3157
Escherichia coli	562	PRJEB4685	227248	Proteobacteria	Gammaproteobacteria	4.79566	50.8	-	CCCP01	27	4921	4614	5/11/14	2/23/17	Scaffold	INRA DE TOURS	SAMEA3139080	GCA_000731455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/455/GCA_000731455.1_V1	-	D6-117_07.11
Mycobacterium tuberculosis TKK_04_0030	1397939	PRJNA218311	218311	Terrabacteria group	Actinobacteria	4.40729	65.5	-	JLSW01	3	4294	4122	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350494	GCA_000673455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/455/GCA_000673455.1_Myco_tube_TKK_04_0030_V1	-	TKK_04_0030
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.93023	37.9	-	MJPK01	14	2996	2924	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03357997	GCA_001826825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/825/GCA_001826825.1_ASM182682v1	-	BCW_4269
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82061	51.9	-	CIUP01	41	5008	4638	3/21/15	2/27/17	Contig	SC	SAMEA2066519	GCA_001087005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/005/GCA_001087005.1_10209_5_11	-	2008-006685
Staphylococcus aureus M1557	1403929	PRJNA221475	221475	Terrabacteria group	Firmicutes	2.84599	32.9	-	JDCF01	45	2989	2803	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364068	GCA_000550705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/705/GCA_000550705.1_Stap_aure_M1557_V1	-	M1557
Staphylococcus aureus M1559	1403931	PRJNA221477	221477	Terrabacteria group	Firmicutes	2.85762	32.9	-	JDCG01	29	3006	2825	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02364070	GCA_000550725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/725/GCA_000550725.1_Stap_aure_M1559_V1	-	M1559
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3164	204701	Proteobacteria	Gammaproteobacteria	4.72427	52	-	CJRI01	39	4881	4518	3/21/15	2/27/17	Contig	SC	SAMEA1572027	GCA_001087165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/165/GCA_001087165.1_8525_3_53	-	Ke474
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.05729	37.8	-	MJPL01	24	3155	3055	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03357998	GCA_001826855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/855/GCA_001826855.1_ASM182685v1	-	BCW_4270
Mycobacterium tuberculosis TKK_04_0031	1397940	PRJNA218312	218312	Terrabacteria group	Actinobacteria	4.43733	65.6	-	JLSV01	3	4302	4127	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350495	GCA_000673475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/475/GCA_000673475.1_Myco_tube_TKK_04_0031_V1	-	TKK_04_0031
Escherichia coli	562	PRJNA261723	261723	Proteobacteria	Gammaproteobacteria	5.04646	50.8	-	JRKU01	92	5243	4940	10/31/14	2/23/17	Scaffold	Walter Reed Army Institute of Research	SAMN03075588	GCA_000770275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/275/GCA_000770275.1_ASM77027v1	25870058	MRSN17749
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.04255	39.8	-	CRIL01	51	2254	2041	3/23/15	3/4/17	Contig	SC	SAMEA1025406	GCA_001148145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/145/GCA_001148145.1_6736_8_7	-	SMRU1303
Pseudomonas aeruginosa	287	PRJNA342804	342804	Proteobacteria	Gammaproteobacteria	6.42717	66	-	NIPG01	80	6152	5971	6/14/17	6/19/17	Contig	JCVI	SAMN07185580	GCA_002194135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/135/GCA_002194135.1_ASM219413v1	-	836
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	3.74949	39.5	-	LUUV01	532	3668	3434	5/23/16	3/20/17	Contig	University of Sao Paulo	SAMN04549226	GCA_001649625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/625/GCA_001649625.1_ASM164962v1	-	LIM552
Klebsiella pneumoniae	573	PRJNA350762	350762	Proteobacteria	Gammaproteobacteria	5.40498	57.2	-	MOSQ01	1112	5761	5024	6/6/17	6/8/17	Contig	Beijing Institute of Genomics	SAMN05945928	GCA_002174005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/005/GCA_002174005.1_ASM217400v1	-	H11
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.08537	64.2	-	FSQQ01	26	5099	4953	12/14/16	3/22/17	Scaffold	SC	SAMEA2275831	GCA_900141615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/615/GCA_900141615.1_12163_2_71	-	1105
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.33986	64.2	-	FSQR01	40	5444	5267	12/14/16	3/22/17	Scaffold	SC	SAMEA2275864	GCA_900141645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/645/GCA_900141645.1_12163_2_94	-	1138
Klebsiella pneumoniae	573	PRJNA350771	350771	Proteobacteria	Gammaproteobacteria	5.37438	57.3	-	MOSR01	304	5442	5089	6/6/17	6/8/17	Contig	Beijing Institute of Genomics	SAMN05945968	GCA_002174015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/015/GCA_002174015.1_ASM217401v1	-	2045
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	3.8782	39.4	-	LUUZ01	719	3804	3518	5/23/16	3/20/17	Contig	University of Sao Paulo	SAMN04549230	GCA_001649675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/675/GCA_001649675.1_ASM164967v1	-	LIM891
Pseudomonas aeruginosa	287	PRJNA388357	388357	Proteobacteria	Gammaproteobacteria	6.95478	65.9	-	NIJA01	230	6715	6461	6/20/17	9/19/17	Contig	Sengenics sdn bhd	SAMN07175297	GCA_002201225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/225/GCA_002201225.1_ASM220122v1	28797043	PAS5
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00074	39.7	-	CNVX02	118	2133	1953	3/22/15	3/11/17	Contig	SC	SAMEA1032531	GCA_001148165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/165/GCA_001148165.2_7001_1_10	-	R34-3087
Escherichia coli	562	PRJNA261723	261723	Proteobacteria	Gammaproteobacteria	5.18439	50.7	-	JRKV01	114	5439	5111	10/31/14	2/23/17	Scaffold	Walter Reed Army Institute of Research	SAMN03075589	GCA_000770285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/285/GCA_000770285.1_ASM77028v1	25870058	MRSN22624
Mycobacterium tuberculosis TKK_04_0033	1397941	PRJNA218313	218313	Terrabacteria group	Actinobacteria	4.40635	65.6	-	JLSU01	6	4295	4102	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02350496	GCA_000673495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/495/GCA_000673495.1_Myco_tube_TKK_04_0033_V1	-	TKK_04_0033
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.00346	37.8	-	MJPM01	17	3051	2973	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03357999	GCA_001826875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/875/GCA_001826875.1_ASM182687v1	-	BCW_4271
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93444	51.8	-	CJVT01	60	5145	4755	3/21/15	2/27/17	Contig	SC	SAMEA2055772	GCA_001087985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/985/GCA_001087985.1_9870_8_63	-	BC2011-1307
Staphylococcus aureus M0004	1387986	PRJNA216155	216155	Terrabacteria group	Firmicutes	2.86412	32.8	-	JBVH01	40	3035	2861	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325110	GCA_000550845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/845/GCA_000550845.1_Stap_aure_M0004_V1	-	M0004
Staphylococcus aureus M0005	1387987	PRJNA216156	216156	Terrabacteria group	Firmicutes	2.86655	32.8	-	JBVI01	49	3014	2846	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325111	GCA_000550865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/865/GCA_000550865.1_Stap_aure_M0005_V1	-	M0005
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81137	52.1	-	CJJL01	57	4990	4625	3/21/15	2/27/17	Contig	SC	SAMEA1930244	GCA_001088605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/605/GCA_001088605.1_10592_2_46	-	IPCU
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.05963	37.8	-	MJPN01	36	3136	3030	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358000	GCA_001826895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/895/GCA_001826895.1_ASM182689v1	-	BCW_4272
Mycobacterium tuberculosis KT-0001	1400870	PRJNA219753	219753	Terrabacteria group	Actinobacteria	4.40169	65.5	-	JLSO01	9	4287	4093	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360548	GCA_000673515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/515/GCA_000673515.1_Myco_tube_KT-0001_V1	-	KT-0001
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.99966	50.6	-	JSFU01	340	5248	4800	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802190	GCA_000776735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/735/GCA_000776735.1_ASM77673v1	25373147	upec-94
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08901	39.7	-	CKUB01	87	2328	2110	3/21/15	3/4/17	Contig	SC	SAMEA1025815	GCA_001148205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/205/GCA_001148205.1_6823_2_23	-	SMRU1895
Pseudomonas aeruginosa	287	PRJNA388357	388357	Proteobacteria	Gammaproteobacteria	7.03609	66	-	NIIZ01	189	6784	6529	6/20/17	9/19/17	Contig	Sengenics sdn bhd	SAMN07175298	GCA_002201255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/255/GCA_002201255.1_ASM220125v1	28797043	PAS6
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	3.80096	39.6	-	LUVB01	986	3748	3425	5/23/16	3/20/17	Contig	University of Sao Paulo	SAMN04549232	GCA_001649705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/705/GCA_001649705.1_ASM164970v1	-	LIM929
Klebsiella pneumoniae	573	PRJNA350773	350773	Proteobacteria	Gammaproteobacteria	5.52604	57.2	-	MOSS01	299	5576	5344	6/6/17	6/8/17	Contig	Beijing Institute of Genomics	SAMN05945972	GCA_002174025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/025/GCA_002174025.1_ASM217402v1	-	H18
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.12186	64.2	-	FSQU01	30	5124	4973	12/14/16	3/21/17	Scaffold	SC	SAMEA2275865	GCA_900141675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/675/GCA_900141675.1_12163_2_95	-	1139
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.5431	64	-	FVYX01	130	5639	5423	3/10/17	3/18/17	Scaffold	SC	SAMEA2275860	GCA_900141685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/685/GCA_900141685.1_12163_2_91	-	1134
Klebsiella pneumoniae	573	PRJNA350772	350772	Proteobacteria	Gammaproteobacteria	5.46714	57.3	-	MOST01	187	5489	5288	6/6/17	6/8/17	Contig	Beijing Institute of Genomics	SAMN05945973	GCA_002174075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/075/GCA_002174075.1_ASM217407v1	-	H15
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	4.01341	39.2	-	LUVG01	646	3954	3649	5/23/16	3/20/17	Contig	University of Sao Paulo	SAMN04549237	GCA_001649765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/765/GCA_001649765.1_ASM164976v1	-	LIM1049
Pseudomonas aeruginosa	287	PRJNA388357	388357	Proteobacteria	Gammaproteobacteria	6.62728	66.2	-	NIJD01	243	6389	6140	6/20/17	9/19/17	Contig	Sengenics sdn bhd	SAMN07175294	GCA_002201295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/295/GCA_002201295.1_ASM220129v1	28797043	PAS2
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.03654	39.7	-	CKNL01	63	2239	2031	3/21/15	3/4/17	Contig	SC	SAMEA1023738	GCA_001148245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/245/GCA_001148245.1_6664_1_19	-	19F
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.07369	50.4	-	JSGC01	69	5173	4850	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802182	GCA_000776745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/745/GCA_000776745.1_ASM77674v1	25373147	upec-87
Mycobacterium tuberculosis KT-0002	1400871	PRJNA219754	219754	Terrabacteria group	Actinobacteria	4.42725	65.5	-	JLSN01	11	4288	4096	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360549	GCA_000673535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/535/GCA_000673535.1_Myco_tube_KT-0002_V1	-	KT-0002
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.05698	37.8	-	MJPO01	32	3095	3019	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358001	GCA_001826915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/915/GCA_001826915.1_ASM182691v1	-	BCW_4273
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70538	52.1	-	CILJ01	40	4856	4499	3/21/15	2/27/17	Contig	SC	SAMEA1930202	GCA_001088765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/765/GCA_001088765.1_10593_2_11	-	E02-1687
Staphylococcus aureus M0007	1387988	PRJNA216157	216157	Terrabacteria group	Firmicutes	2.88002	32.7	-	JBVJ01	67	3056	2921	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325112	GCA_000550885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/885/GCA_000550885.1_Stap_aure_M0007_V1	-	M0007
Staphylococcus aureus M0008	1387989	PRJNA216158	216158	Terrabacteria group	Firmicutes	2.88781	32.8	-	JBVK01	68	3066	2929	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325113	GCA_000550905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/905/GCA_000550905.1_Stap_aure_M0008_V1	-	M0008
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71494	52.1	-	CIYY01	46	4874	4514	3/21/15	2/27/17	Contig	SC	SAMEA2152199	GCA_001089565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/565/GCA_001089565.1_10492_1_16	-	MDUST154
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.97014	37.9	-	MJPQ01	17	3004	2934	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358003	GCA_001826955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/955/GCA_001826955.1_ASM182695v1	-	BCW_4275
Mycobacterium tuberculosis KT-0003	1400872	PRJNA219755	219755	Terrabacteria group	Actinobacteria	4.4237	65.5	-	JLSM01	10	4283	4098	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360550	GCA_000673555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/555/GCA_000673555.1_Myco_tube_KT-0003_V1	-	KT-0003
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.96306	50.4	-	JSFZ01	125	5118	4719	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802185	GCA_000776795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/795/GCA_000776795.1_ASM77679v1	25373147	upec-9
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07799	39.7	-	CRSL01	69	2295	2087	3/22/15	3/4/17	Contig	SC	SAMEA1025680	GCA_001148285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/285/GCA_001148285.1_6805_3_13	-	SMRU1453
Pseudomonas aeruginosa	287	PRJNA388357	388357	Proteobacteria	Gammaproteobacteria	6.73179	66.1	-	NIJC01	322	6516	6241	6/20/17	8/14/17	Contig	Sengenics sdn bhd	SAMN07175295	GCA_002201305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/305/GCA_002201305.1_ASM220130v1	28797043	PAS3
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	3.87565	39.4	-	LUVH01	775	3806	3532	5/23/16	3/20/17	Contig	University of Sao Paulo	SAMN04549238	GCA_001649795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/795/GCA_001649795.1_ASM164979v1	-	LIM1126
Klebsiella pneumoniae	573	PRJNA350743	350743	Proteobacteria	Gammaproteobacteria	5.84489	57.2	-	MOSI01	1275	6257	5494	6/6/17	6/8/17	Contig	Beijing Institute of Genomics	SAMN05945899	GCA_002174175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/174/175/GCA_002174175.1_ASM217417v1	-	344
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.49125	64.1	-	FSQS01	40	5626	5425	12/14/16	3/22/17	Scaffold	SC	SAMEA2275863	GCA_900141695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/695/GCA_900141695.1_12163_2_93	-	1137
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB7058	297964	Terrabacteria group	Actinobacteria	4.78374	64.3	-	FWDG01	2	4786	4682	3/16/17	3/24/17	Scaffold	SC	SAMEA3375782	GCA_900169205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/205/GCA_900169205.1_16933_5_1	-	3275STDY5961976
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.28166	57.4	-	NDBG01	86	5358	5137	6/8/17	6/10/17	Contig	JCVI	SAMN06218066	GCA_002180485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/485/GCA_002180485.1_ASM218048v1	-	41949
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	3.8166	39.6	-	LUVK01	1079	3763	3473	5/23/16	3/20/17	Contig	University of Sao Paulo	SAMN04549241	GCA_001649805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/805/GCA_001649805.1_ASM164980v1	-	LIM1029
Pseudomonas aeruginosa	287	PRJNA388357	388357	Proteobacteria	Gammaproteobacteria	6.95581	65.9	-	NIIV01	239	6726	6454	6/20/17	9/20/17	Contig	Sengenics sdn bhd	SAMN07175302	GCA_002201325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/325/GCA_002201325.1_ASM220132v1	28797043	PAS10
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.12822	39.7	-	CMWI01	58	2278	1981	3/23/15	3/6/17	Contig	SC	SAMEA1022837	GCA_001148405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/405/GCA_001148405.1_5756_7_5	-	313
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.21103	50.7	-	JSFY01	164	5548	5148	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802186	GCA_000776835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/835/GCA_000776835.1_ASM77683v1	25373147	upec-90
Mycobacterium tuberculosis KT-0006	1400873	PRJNA219756	219756	Terrabacteria group	Actinobacteria	4.40068	65.5	-	JLSL01	8	4283	4102	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360551	GCA_000673575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/575/GCA_000673575.1_Myco_tube_KT-0006_V1	-	KT-0006
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.02391	37.8	-	MJPR01	20	3072	2990	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358004	GCA_001826975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/975/GCA_001826975.1_ASM182697v1	-	BCW_4276
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74568	52.1	-	CJUB01	52	4915	4550	3/21/15	2/27/17	Contig	SC	SAMEA1903835	GCA_001089865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/865/GCA_001089865.1_9475_6_9	-	1008634
Staphylococcus aureus M0009	1387990	PRJNA216159	216159	Terrabacteria group	Firmicutes	2.88431	32.8	-	JBVL01	66	3056	2887	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325114	GCA_000550925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/925/GCA_000550925.1_Stap_aure_M0009_V1	-	M0009
Staphylococcus aureus M0010	1387991	PRJNA216160	216160	Terrabacteria group	Firmicutes	2.90208	32.8	-	JBVM01	72	3096	2906	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325115	GCA_000550945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/945/GCA_000550945.1_Stap_aure_M0010_V1	-	M0010
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.86993	51.9	-	CIUZ01	206	5046	4636	3/21/15	2/27/17	Contig	SC	SAMEA2064362	GCA_001089925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/925/GCA_001089925.1_10209_5_28	-	UI1151
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.9329	38.1	-	MJPS01	10	2994	2901	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358005	GCA_001826985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/826/985/GCA_001826985.1_ASM182698v1	-	BCW_4277
Mycobacterium tuberculosis KT-0007	1400874	PRJNA219757	219757	Terrabacteria group	Actinobacteria	4.40102	65.5	-	JLSK01	13	4286	4108	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360552	GCA_000673595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/595/GCA_000673595.1_Myco_tube_KT-0007_V1	-	KT-0007
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.28966	50.5	-	JSFX01	114	5447	5017	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802187	GCA_000776855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/855/GCA_000776855.1_ASM77685v1	25373147	upec-91
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05383	39.5	-	COCO02	121	2254	2037	3/22/15	3/11/17	Contig	SC	SAMEA1463118	GCA_001148445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/445/GCA_001148445.2_7622_3_72	-	CH2108
Pseudomonas aeruginosa	287	PRJNA388357	388357	Proteobacteria	Gammaproteobacteria	7.05048	65.8	-	NIIW01	279	6817	6529	6/20/17	9/19/17	Contig	Sengenics sdn bhd	SAMN07175301	GCA_002201375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/375/GCA_002201375.1_ASM220137v1	28797043	PAS9
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	3.74329	39.7	-	LUUY01	736	3656	3408	5/23/16	3/20/17	Contig	University of Sao Paulo	SAMN04549229	GCA_001649815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/815/GCA_001649815.1_ASM164981v1	-	LIM1820
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	6.12702	56.4	-	NDBK01	131	6241	5939	6/8/17	6/10/17	Contig	JCVI	SAMN06218028	GCA_002180495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/495/GCA_002180495.1_ASM218049v1	-	39383
Mycobacterium abscessus M148	1175633	PRJNA159703	159703	Terrabacteria group	Actinobacteria	5.13802	64	-	AKVV01	344	-	-	7/20/12	1/8/14	Contig	"Universiti Malaya, Kuala Lumpur"	SAMN02471417	GCA_000280655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/655/GCA_000280655.1_ASM28065v1	-	M148
Mycobacterium abscessus MAB_082312_2258	1335411	PRJNA203566	203566	Terrabacteria group	Actinobacteria	4.79829	64.2	-	AYTA01	6	5103	5056	11/27/13	3/27/14	Contig	Institute for Genome Sciences	SAMN02435818	GCA_000500165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/165/GCA_000500165.1_MAB_082312_2258	24565502	MAB_082312_2258
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.60973	57.2	-	NDBF01	111	5732	5479	6/8/17	6/10/17	Contig	JCVI	SAMN06218068	GCA_002180525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/525/GCA_002180525.1_ASM218052v1	-	41947
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	3.77147	39.6	-	LUVA01	685	3709	3446	5/23/16	3/20/17	Contig	University of Sao Paulo	SAMN04549231	GCA_001649835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/835/GCA_001649835.1_ASM164983v1	-	LIM994
Pseudomonas aeruginosa	287	PRJNA388357	388357	Proteobacteria	Gammaproteobacteria	6.76267	66	-	NIIX01	293	6558	6265	6/20/17	9/19/17	Contig	Sengenics sdn bhd	SAMN07175300	GCA_002201385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/385/GCA_002201385.1_ASM220138v1	28797043	PAS8
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.21842	39.4	-	CLAH01	87	2446	2206	3/21/15	3/4/17	Contig	SC	SAMEA1025720	GCA_001148505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/505/GCA_001148505.1_6840_3_6	-	SMRU1806
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.14279	50.5	-	JSHJ01	127	5349	4915	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802146	GCA_000776925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/925/GCA_000776925.1_ASM77692v1	25373147	upec-54
Mycobacterium tuberculosis KT-0008	1400875	PRJNA219758	219758	Terrabacteria group	Actinobacteria	4.41141	65.5	-	JLSJ01	15	4302	4103	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360553	GCA_000673615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/615/GCA_000673615.1_Myco_tube_KT-0008_V1	-	KT-0008
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.96932	37.8	-	MJPT01	22	3036	2955	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358006	GCA_001827015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/015/GCA_001827015.1_ASM182701v1	-	BCW_4278
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73124	52	-	CJPC01	45	4891	4532	3/21/15	2/27/17	Contig	SC	SAMEA1572782	GCA_001090105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/105/GCA_001090105.1_8447_8_4	-	MDUST76
Staphylococcus aureus M0011	1387992	PRJNA216161	216161	Terrabacteria group	Firmicutes	2.8742	32.8	-	JBVN01	63	3042	2877	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325116	GCA_000550965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/965/GCA_000550965.1_Stap_aure_M0011_V1	-	M0011
Staphylococcus aureus M0012	1387993	PRJNA216162	216162	Terrabacteria group	Firmicutes	2.8666	32.8	-	JBVO01	36	3035	2867	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325117	GCA_000550985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/550/985/GCA_000550985.1_Stap_aure_M0012_V1	-	M0012
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93525	51.8	-	CJWD01	61	5130	4743	3/21/15	2/27/17	Contig	SC	SAMEA2058434	GCA_001090385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/385/GCA_001090385.1_9870_8_79	-	01-2012-002473
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.9596	37.8	-	MJPU01	16	2985	2902	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358007	GCA_001827025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/025/GCA_001827025.1_ASM182702v1	-	BCW_4279
Mycobacterium tuberculosis KT-0011	1400877	PRJNA219760	219760	Terrabacteria group	Actinobacteria	4.39499	65.6	-	JLSI01	8	4290	4102	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360555	GCA_000673635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/635/GCA_000673635.1_Myco_tube_KT-0011_V1	-	KT-0011
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.07747	50.6	-	JSHL01	84	5277	4946	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802143	GCA_000776965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/965/GCA_000776965.1_ASM77696v1	25373147	upec-51
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.03293	39.7	-	CNRX02	118	2219	2025	3/23/15	3/5/17	Contig	SC	SAMEA1032441	GCA_001148565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/565/GCA_001148565.2_6999_2_2	-	R34-3208
Pseudomonas aeruginosa	287	PRJNA388357	388357	Proteobacteria	Gammaproteobacteria	6.85178	65.9	-	NIIY01	492	6522	6246	6/20/17	9/19/17	Contig	Sengenics sdn bhd	SAMN07175299	GCA_002201395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/395/GCA_002201395.1_ASM220139v1	28797043	PAS7
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	3.95616	39.3	-	LUVC01	591	3898	3635	5/23/16	3/20/17	Contig	University of Sao Paulo	SAMN04549233	GCA_001649875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/875/GCA_001649875.1_ASM164987v1	-	LIM997
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.77447	57	-	NDBL01	155	5897	5619	6/8/17	6/10/17	Contig	JCVI	SAMN06218026	GCA_002180535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/535/GCA_002180535.1_ASM218053v1	-	39385
Mycobacterium abscessus MAB_091912_2446	1335414	PRJNA203569	203569	Terrabacteria group	Actinobacteria	4.83294	64.2	-	AYTF01	4	5066	5018	11/27/13	3/27/14	Contig	Institute for Genome Sciences	SAMN02435822	GCA_000500185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/185/GCA_000500185.1_MAB_091912_2446	24565502	MAB_091912_2446
Mycobacterium abscessus MAB_030201_1075	1335410	PRJNA203565	203565	Terrabacteria group	Actinobacteria	4.76164	64.3	-	JAOX01	2	4964	4915	1/27/14	2/22/14	Contig	Institute for Genome Sciences	SAMN02641616	GCA_000523575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/575/GCA_000523575.1_ASM52357v1	-	MAB_030201_1075
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.59196	57.2	-	NDBN01	119	5733	5476	6/8/17	6/10/17	Contig	JCVI	SAMN06218023	GCA_002180565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/565/GCA_002180565.1_ASM218056v1	-	39428
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	3.9298	39.4	-	LUVI01	749	3853	3593	5/23/16	3/20/17	Contig	University of Sao Paulo	SAMN04549239	GCA_001649895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/895/GCA_001649895.1_ASM164989v1	-	LIM1099
Pseudomonas aeruginosa	287	PRJNA388357	388357	Proteobacteria	Gammaproteobacteria	6.75342	66	-	NIJB01	185	6474	6229	6/20/17	8/14/17	Contig	Sengenics sdn bhd	SAMN07175296	GCA_002201405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/405/GCA_002201405.1_ASM220140v1	28797043	PAS4
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.02861	39.6	-	CNOQ02	102	2212	2000	3/23/15	3/5/17	Contig	SC	SAMEA1032747	GCA_001148585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/585/GCA_001148585.2_6925_2_94	-	R34-3076
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.0809	50.7	-	JSHM01	135	5325	4989	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802142	GCA_000776995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/995/GCA_000776995.1_ASM77699v1	25373147	upec-50
Mycobacterium tuberculosis KT-0014	1400879	PRJNA219762	219762	Terrabacteria group	Actinobacteria	4.40379	65.6	-	JLSH01	10	4292	4101	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360557	GCA_000673655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/655/GCA_000673655.1_Myco_tube_KT-0014_V1	-	KT-0014
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.95656	37.9	-	MJPV01	18	3009	2944	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358008	GCA_001827055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/055/GCA_001827055.1_ASM182705v1	-	BCW_4280
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74135	52.1	-	CJMI01	49	4897	4533	3/21/15	2/27/17	Contig	SC	SAMEA2151543	GCA_001090485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/485/GCA_001090485.1_10607_2_10	-	1003117
Staphylococcus aureus M0013	1387994	PRJNA216163	216163	Terrabacteria group	Firmicutes	2.91221	32.9	-	JBVP01	78	3100	2910	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325118	GCA_000551005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/005/GCA_000551005.1_Stap_aure_M0013_V1	-	M0013
Staphylococcus aureus M0014	1387995	PRJNA216164	216164	Terrabacteria group	Firmicutes	2.90756	32.9	-	JBVQ01	76	3091	2900	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325119	GCA_000551025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/025/GCA_000551025.1_Stap_aure_M0014_V1	-	M0014
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.94104	51.8	-	CJVK01	88	5125	4746	3/21/15	2/27/17	Contig	SC	SAMEA2055648	GCA_001090925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/925/GCA_001090925.1_9870_8_48	-	01-2010-004103
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.99932	37.8	-	MJPW01	24	3032	2956	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358009	GCA_001827065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/065/GCA_001827065.1_ASM182706v1	-	BCW_4281
Mycobacterium tuberculosis KT-0015	1400880	PRJNA219763	219763	Terrabacteria group	Actinobacteria	4.41506	65.5	-	JLSG01	8	4302	4115	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360558	GCA_000673675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/675/GCA_000673675.1_Myco_tube_KT-0015_V1	-	KT-0015
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.26043	50.6	-	JSHO01	92	5533	5191	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802139	GCA_000777025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/025/GCA_000777025.1_ASM77702v1	25373147	upec-48
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04437	39.6	-	CNSG02	138	2230	2011	3/23/15	3/11/17	Contig	SC	SAMEA1032530	GCA_001148705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/705/GCA_001148705.2_6999_3_15	-	49470
Pseudomonas aeruginosa	287	PRJNA388357	388357	Proteobacteria	Gammaproteobacteria	6.90997	65.8	-	NIJE01	325	6606	6355	6/20/17	8/14/17	Contig	Sengenics sdn bhd	SAMN07175293	GCA_002201455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/455/GCA_002201455.1_ASM220145v1	28797043	PAS1
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	3.86338	39.4	-	LUVL01	512	3775	3568	5/23/16	3/20/17	Contig	University of Sao Paulo	SAMN04549242	GCA_001649955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/955/GCA_001649955.1_ASM164995v1	-	LIM1128
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.65524	57.1	-	NDBM01	136	5821	5571	6/8/17	6/10/17	Contig	JCVI	SAMN06218024	GCA_002180595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/595/GCA_002180595.1_ASM218059v1	-	39427
Mycobacterium abscessus MAB_030201_1061	1335409	PRJNA203564	203564	Terrabacteria group	Actinobacteria	4.75963	64.3	-	JAOY01	1	4925	4876	1/27/14	2/22/14	Contig	Institute for Genome Sciences	SAMN02641615	GCA_000523775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/775/GCA_000523775.1_ASM52377v1	-	MAB_030201_1061
Mycobacterium abscessus 21	1299324	PRJNA191788	191788	Terrabacteria group	Actinobacteria	5.03054	64.2	-	JAOF01	1	5280	5230	1/27/14	2/22/14	Contig	Institute for Genome Sciences	SAMN02641604	GCA_000523835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/835/GCA_000523835.1_ASM52383v1	-	21
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.6578	57.2	-	NDBO01	148	5823	5563	6/8/17	6/10/17	Contig	JCVI	SAMN06218022	GCA_002180605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/605/GCA_002180605.1_ASM218060v1	-	39865
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	3.68707	39.6	-	LUVM01	756	3571	3386	5/23/16	3/20/17	Contig	University of Sao Paulo	SAMN04549243	GCA_001649975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/975/GCA_001649975.1_ASM164997v1	-	LIM1132
Pseudomonas aeruginosa	287	PRJNA378434	378434	Proteobacteria	Gammaproteobacteria	6.37359	66.5	-	MYFK01	52	6041	5892	6/21/17	7/3/17	Contig	Universidad Autonoma del Estado de Morelos	SAMN06546651	GCA_002204155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/155/GCA_002204155.1_ASM220415v1	-	NA04
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10338	39.7	-	CMIY01	43	2335	2114	3/23/15	3/10/17	Contig	SC	SAMEA1026110	GCA_001148785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/785/GCA_001148785.1_7038_8_27	-	SMRU2235
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.9512	50.7	-	JSHQ01	54	5063	4792	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802136	GCA_000777065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/065/GCA_000777065.1_ASM77706v1	25373147	upec-45
Mycobacterium tuberculosis KT-0016	1400881	PRJNA219764	219764	Terrabacteria group	Actinobacteria	4.39065	65.6	-	JLSF01	14	4276	4093	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360559	GCA_000673695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/695/GCA_000673695.1_Myco_tube_KT-0016_V1	-	KT-0016
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.95899	37.9	-	MJPY01	34	2990	2912	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358011	GCA_001827095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/095/GCA_001827095.1_ASM182709v1	-	BCW_4283
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93189	51.8	-	CJVM01	67	5122	4739	3/21/15	2/27/17	Contig	SC	SAMEA1969612	GCA_001091425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/425/GCA_001091425.1_9870_8_52	-	2011-007445
Staphylococcus aureus M0016	1387996	PRJNA216165	216165	Terrabacteria group	Firmicutes	2.8627	32.8	-	JBVR01	53	3038	2861	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325120	GCA_000551045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/045/GCA_000551045.1_Stap_aure_M0016_V1	-	M0016
Staphylococcus aureus M0017	1387997	PRJNA216166	216166	Terrabacteria group	Firmicutes	2.8626	32.8	-	JBVS01	38	3032	2862	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325121	GCA_000551065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/065/GCA_000551065.1_Stap_aure_M0017_V1	-	M0017
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.94172	51.8	-	CJWH01	73	5142	4755	3/21/15	2/27/17	Contig	SC	SAMEA2056665	GCA_001091725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/725/GCA_001091725.1_9870_8_86	-	2012-010060
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.1269	37.9	-	MJPZ01	36	3207	3117	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358012	GCA_001827135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/135/GCA_001827135.1_ASM182713v1	-	BCW_4284
Mycobacterium tuberculosis KT-0017	1400882	PRJNA219765	219765	Terrabacteria group	Actinobacteria	4.37115	65.6	-	JLSE01	13	4270	4084	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360560	GCA_000673715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/715/GCA_000673715.1_Myco_tube_KT-0017_V1	-	KT-0017
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.82529	50.5	-	JSHS01	104	4954	4516	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802132	GCA_000777095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/095/GCA_000777095.1_ASM77709v1	25373147	upec-41
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05836	39.6	-	CNWM02	171	2220	2020	3/23/15	3/5/17	Contig	SC	SAMEA1032447	GCA_001148865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/865/GCA_001148865.2_7001_2_19	-	R34-3124
Pseudomonas aeruginosa	287	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	6.89998	65.8	-	NJFL01	2	6522	6185	6/23/17	6/26/17	Contig	US Food and Drug Administration 	SAMN06173353	GCA_002206285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/285/GCA_002206285.1_ASM220628v1	-	FDAARGOS_340
Acinetobacter baumannii	470	PRJNA319472	319472	Proteobacteria	Gammaproteobacteria	4.22099	39.5	-	LWTH01	372	4036	3871	6/4/16	3/20/17	Contig	Robert Koch Institute	SAMN04892866	GCA_001657725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/725/GCA_001657725.1_ASM165772v1	-	IHIT7853
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.47569	57.3	-	NDBQ01	80	5539	5293	6/8/17	6/10/17	Contig	JCVI	SAMN06218047	GCA_002180645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/645/GCA_002180645.1_ASM218064v1	-	39879
Mycobacterium abscessus 1948	1299323	PRJNA191787	191787	Terrabacteria group	Actinobacteria	5.15249	64.1	-	JAOH01	2	5553	5503	1/27/14	2/22/14	Contig	Institute for Genome Sciences	SAMN02641603	GCA_000523855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/855/GCA_000523855.1_ASM52385v1	-	1948
Mycobacterium abscessus subsp. bolletii 1513	1299321	PRJNA191785	191785	Terrabacteria group	Actinobacteria	5.2588	64	-	JAOJ01	7	6081	5996	1/27/14	2/22/14	Contig	Institute for Genome Sciences	SAMN02641601	GCA_000523875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/523/875/GCA_000523875.1_ASM52387v1	-	1513
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.64067	57	-	NDBT01	130	5803	5486	6/8/17	6/10/17	Contig	JCVI	SAMN06218043	GCA_002180655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/655/GCA_002180655.1_ASM218065v1	-	39887
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.96893	39	-	LYZN01	128	3836	3671	6/17/16	3/20/17	Contig	JCVI	SAMN04993414	GCA_001664565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/565/GCA_001664565.1_ASM166456v1	-	CCF34
Pseudomonas aeruginosa	287	PRJNA343070	343070	Proteobacteria	Gammaproteobacteria	7.02562	66	-	MJMC01	4	6814	6601	6/30/17	7/3/17	Contig	Leibniz Institute DSMZ-German Collection of Microrganisms and Cell Cultures	SAMN05773091	GCA_002211545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/211/545/GCA_002211545.1_ASM221154v1	28630206	PA77
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07103	39.7	-	CRKH01	73	2288	2080	3/23/15	3/10/17	Contig	SC	SAMEA1025647	GCA_001148905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/905/GCA_001148905.1_6753_3_24	-	SMRU1536
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.13821	50.5	-	JSHR01	566	5642	4901	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802134	GCA_000777105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/105/GCA_000777105.1_ASM77710v1	25373147	upec-43
Mycobacterium tuberculosis KT-0019	1400883	PRJNA219766	219766	Terrabacteria group	Actinobacteria	4.40096	65.5	-	JLSD01	11	4282	4095	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360561	GCA_000673735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/735/GCA_000673735.1_Myco_tube_KT-0019_V1	-	KT-0019
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.93356	37.9	-	MJQA01	19	2956	2871	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358013	GCA_001827145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/145/GCA_001827145.1_ASM182714v1	-	BCW_4285
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81377	52.1	-	CJJW01	46	4983	4622	3/21/15	2/27/17	Contig	SC	SAMEA1930231	GCA_001092145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/145/GCA_001092145.1_10592_2_71	-	IPCC
Staphylococcus aureus M0021	1387999	PRJNA216168	216168	Terrabacteria group	Firmicutes	2.90719	32.8	-	JBVT01	64	3110	2934	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325123	GCA_000551085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/085/GCA_000551085.1_Stap_aure_M0021_V1	-	M0021
Staphylococcus aureus M0022	1388000	PRJNA216169	216169	Terrabacteria group	Firmicutes	2.9024	32.9	-	JBVU01	29	3058	2886	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325124	GCA_000551105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/105/GCA_000551105.1_Stap_aure_M0022_V1	-	M0022
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7477	52.1	-	CJSL01	47	4909	4547	3/21/15	2/27/17	Contig	SC	SAMEA1903851	GCA_001092245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/245/GCA_001092245.1_9475_6_25	-	1007917
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.00428	37.8	-	MJQB01	18	3069	2983	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358015	GCA_001827175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/175/GCA_001827175.1_ASM182717v1	-	BCW_4287
Mycobacterium tuberculosis KT-0022	1400884	PRJNA219767	219767	Terrabacteria group	Actinobacteria	4.41908	65.6	-	JLSC01	6	4305	4139	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360562	GCA_000673755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/755/GCA_000673755.1_Myco_tube_KT-0022_V1	-	KT-0022
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.00656	50.6	-	JSHT01	61	5092	4779	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802131	GCA_000777135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/135/GCA_000777135.1_ASM77713v1	25373147	upec-40
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.99956	39.7	-	CNOV02	167	2130	1955	3/22/15	3/11/17	Contig	SC	SAMEA1032699	GCA_001148925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/925/GCA_001148925.2_6925_2_92	-	R34-3074
Pseudomonas aeruginosa	287	PRJNA392234	392234	Proteobacteria	Gammaproteobacteria	6.44449	66.4	-	NKXY01	68	6131	5953	7/10/17	7/12/17	Contig	Bard College	SAMN07286077	GCA_002216325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/325/GCA_002216325.1_ASM221632v1	-	Pae112
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.85991	38.9	-	LYZP01	122	3741	3581	6/17/16	3/20/17	Contig	JCVI	SAMN04993416	GCA_001664575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/575/GCA_001664575.1_ASM166457v1	-	CCF36
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.75031	57	-	NDBV01	127	5842	5568	6/8/17	6/10/17	Contig	JCVI	SAMN06218041	GCA_002180685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/685/GCA_002180685.1_ASM218068v1	-	39897
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.14682	64.1	-	CSZU01	26	5412	5325	3/24/15	6/14/15	Contig	SC	SAMEA1317710	GCA_001214385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/385/GCA_001214385.1_7520_7_48	-	PAP168
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15793	64.1	-	CSZE01	21	5367	5279	3/24/15	6/13/15	Contig	SC	SAMEA1317697	GCA_001214905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/905/GCA_001214905.1_7520_7_31	-	PAP151
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.28018	57.5	-	NDBW01	87	5340	5132	6/8/17	6/10/17	Contig	JCVI	SAMN06218040	GCA_002180695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/695/GCA_002180695.1_ASM218069v1	-	39901
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.86134	38.9	-	LYZM01	114	3728	3583	6/17/16	3/20/17	Contig	JCVI	SAMN04993413	GCA_001664585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/585/GCA_001664585.1_ASM166458v1	-	CCF33
Pseudomonas aeruginosa	287	PRJNA392234	392234	Proteobacteria	Gammaproteobacteria	6.38572	66.5	-	NKXZ01	71	6087	5916	7/10/17	7/12/17	Contig	Bard College	SAMN07286076	GCA_002216335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/335/GCA_002216335.1_ASM221633v1	-	Pae111
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.06697	39.5	-	CLJM01	65	2300	2064	3/21/15	3/10/17	Contig	SC	SAMEA1029166	GCA_001148985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/985/GCA_001148985.1_6925_8_14	-	SMRU2534
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.08321	50.7	-	JSHU01	128	5353	4930	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802130	GCA_000777155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/155/GCA_000777155.1_ASM77715v1	25373147	upec-4
Mycobacterium tuberculosis KT-0024	1400886	PRJNA219769	219769	Terrabacteria group	Actinobacteria	4.52359	64.9	-	JLSA01	10	4320	4071	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360564	GCA_000673775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/775/GCA_000673775.1_Myco_tube_KT-0024_V1	-	KT-0024
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.08735	37.8	-	MJQC01	29	3157	3074	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358016	GCA_001827195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/195/GCA_001827195.1_ASM182719v1	-	BCW_4288
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9342	51.8	-	CIVM01	58	5127	4751	3/21/15	2/27/17	Contig	SC	SAMEA2064355	GCA_001092405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/405/GCA_001092405.1_10209_5_4	-	2007-003270
Staphylococcus aureus M0024	1388001	PRJNA216170	216170	Terrabacteria group	Firmicutes	2.88075	32.8	-	JBVV01	58	3066	2893	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325125	GCA_000551125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/125/GCA_000551125.1_Stap_aure_M0024_V1	-	M0024
Staphylococcus aureus M0025	1388002	PRJNA216171	216171	Terrabacteria group	Firmicutes	2.8642	32.8	-	JBVW01	36	3020	2844	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325126	GCA_000551145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/145/GCA_000551145.1_Stap_aure_M0025_V1	-	M0025
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.90921	51.9	-	CJKI01	51	5135	4757	3/21/15	2/27/17	Contig	SC	SAMEA1930223	GCA_001092585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/585/GCA_001092585.1_10593_2_20	-	Jul-94
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.94703	37.9	-	MJQD01	15	2984	2920	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358017	GCA_001827215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/215/GCA_001827215.1_ASM182721v1	-	BCW_4289
Mycobacterium tuberculosis KT-0026	1400887	PRJNA219770	219770	Terrabacteria group	Actinobacteria	4.39033	65.6	-	JLRZ01	4	4289	4109	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360565	GCA_000673795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/795/GCA_000673795.1_Myco_tube_KT-0026_V1	-	KT-0026
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.42222	50.4	-	JSHV01	140	5693	5228	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802129	GCA_000777165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/165/GCA_000777165.1_ASM77716v1	25373147	upec-39
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10074	39.5	-	CRQD01	57	2312	2096	3/22/15	3/10/17	Contig	SC	SAMEA1025072	GCA_001149005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/005/GCA_001149005.1_6775_2_21	-	SMRU861
Pseudomonas aeruginosa	287	PRJNA392234	392234	Proteobacteria	Gammaproteobacteria	6.43895	66.4	-	NKYA01	75	6115	5930	7/10/17	7/12/17	Contig	Bard College	SAMN07286075	GCA_002216345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/345/GCA_002216345.1_ASM221634v1	-	Pae110
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.94584	39	-	LYZL01	82	3830	3687	6/17/16	3/20/17	Contig	JCVI	SAMN04993337	GCA_001664595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/595/GCA_001664595.1_ASM166459v1	-	CCF1
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.72598	56.8	-	NDBX01	123	5840	5544	6/8/17	6/10/17	Contig	JCVI	SAMN06218039	GCA_002180725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/725/GCA_002180725.1_ASM218072v1	-	39902
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.8813	64.1	-	CSZH01	45	4973	4922	3/24/15	6/13/15	Contig	SC	SAMEA1317702	GCA_001217005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/005/GCA_001217005.1_7520_7_35	-	PAP155
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	7.60442	63.7	-	FSEE01	84	7336	7236	12/14/16	12/14/16	Contig	SC	SAMEA2068975	GCA_900134035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/134/035/GCA_900134035.1_10250_1_77	-	417
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.7027	57.2	-	NDBY01	145	5864	5589	6/8/17	6/10/17	Contig	JCVI	SAMN06218038	GCA_002180735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/735/GCA_002180735.1_ASM218073v1	-	39903
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.87955	38.8	-	LYZR01	76	3752	3623	6/17/16	3/20/17	Contig	JCVI	SAMN04993418	GCA_001664645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/645/GCA_001664645.1_ASM166464v1	-	CCF38
Pseudomonas aeruginosa	287	PRJNA392234	392234	Proteobacteria	Gammaproteobacteria	6.39343	66.5	-	NKXX01	65	6063	5894	7/10/17	7/12/17	Contig	Bard College	SAMN07286078	GCA_002216355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/355/GCA_002216355.1_ASM221635v1	-	Pae113
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.13372	39.6	-	CKBZ01	37	2369	2136	3/21/15	3/10/17	Contig	SC	SAMEA1024198	GCA_001149065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/065/GCA_001149065.1_6593_4_12	-	22F
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.92251	50.5	-	JSHW01	51	4947	4637	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802128	GCA_000777195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/195/GCA_000777195.1_ASM77719v1	25373147	upec-38
Mycobacterium tuberculosis KT-0027	1400888	PRJNA219771	219771	Terrabacteria group	Actinobacteria	4.41602	65.5	-	JLRY01	16	4290	4102	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360566	GCA_000673815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/815/GCA_000673815.1_Myco_tube_KT-0027_V1	-	KT-0027
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.00119	37.8	-	MJQE01	12	3060	2975	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358018	GCA_001827225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/225/GCA_001827225.1_ASM182722v1	-	BCW_4290
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.90705	51.9	-	CIVJ01	56	5112	4728	3/21/15	2/27/17	Contig	SC	SAMEA2066525	GCA_001092765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/765/GCA_001092765.1_10209_5_29	-	UI1203
Staphylococcus aureus M0027	1388004	PRJNA216173	216173	Terrabacteria group	Firmicutes	2.91212	32.9	-	JBVY01	74	3082	2896	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325128	GCA_000551185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/185/GCA_000551185.1_Stap_aure_M0027_V1	-	M0027
Staphylococcus aureus M0028	1388005	PRJNA216174	216174	Terrabacteria group	Firmicutes	2.9016	32.9	-	JBVZ01	63	3077	2898	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325129	GCA_000551205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/205/GCA_000551205.1_Stap_aure_M0028_V1	-	M0028
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72476	52	-	CJPA01	46	4881	4518	3/21/15	2/27/17	Contig	SC	SAMEA1572792	GCA_001093025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/025/GCA_001093025.1_8447_8_31	-	MDUST103
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.08456	37.8	-	MJQF01	20	3142	3046	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358019	GCA_001827255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/255/GCA_001827255.1_ASM182725v1	-	BCW_4291
Mycobacterium tuberculosis KT-0028	1400889	PRJNA219772	219772	Terrabacteria group	Actinobacteria	4.40635	65.5	-	JLRX01	4	4275	4093	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360567	GCA_000673835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/835/GCA_000673835.1_Myco_tube_KT-0028_V1	-	KT-0028
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.30545	50.4	-	JSHY01	183	5536	4949	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802126	GCA_000777215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/215/GCA_000777215.1_ASM77721v1	25373147	upec-36
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08681	39.4	-	CRQL01	82	2325	2101	3/23/15	3/10/17	Contig	SC	SAMEA1024834	GCA_001149105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/105/GCA_001149105.1_6775_2_6	-	SMRU846
Pseudomonas aeruginosa	287	PRJNA392234	392234	Proteobacteria	Gammaproteobacteria	6.7829	66	-	NKYD01	101	6435	6231	7/10/17	7/12/17	Contig	Bard College	SAMN07286072	GCA_002216405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/405/GCA_002216405.1_ASM221640v1	-	Pae85
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.92218	39	-	LYZX01	127	3822	3629	6/17/16	3/20/17	Contig	JCVI	SAMN04993340	GCA_001664655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/655/GCA_001664655.1_ASM166465v1	-	CCF4
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.52056	57.2	-	NDCC01	97	5604	5366	6/8/17	6/10/17	Contig	JCVI	SAMN06218078	GCA_002180765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/765/GCA_002180765.1_ASM218076v1	-	39910
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	8.59691	65.3	-	CSVS01	2178	9524	9445	3/24/15	6/13/15	Scaffold	SC	SAMEA1464961	GCA_001213085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/085/GCA_001213085.1_7396_7_18	-	PAP066
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	6.25924	63.9	-	CSVM01	2416	6671	6590	3/24/15	6/13/15	Scaffold	SC	SAMEA1464888	GCA_001213925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/925/GCA_001213925.1_7396_7_13	-	PAP061
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.63297	57.2	-	NDCA01	120	5757	5505	6/8/17	6/10/17	Contig	JCVI	SAMN06218036	GCA_002180775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/775/GCA_002180775.1_ASM218077v1	-	39908
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.88694	38.9	-	LYZT01	118	3761	3612	6/17/16	3/20/17	Contig	JCVI	SAMN04993421	GCA_001664665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/665/GCA_001664665.1_ASM166466v1	-	CCF41
Pseudomonas aeruginosa	287	PRJNA392234	392234	Proteobacteria	Gammaproteobacteria	6.43696	66.4	-	NKYC01	74	6120	5932	7/10/17	7/12/17	Contig	Bard College	SAMN07286073	GCA_002216425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/425/GCA_002216425.1_ASM221642v1	-	Pae100
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12623	39.6	-	CMON01	61	2348	2111	3/23/15	3/11/17	Contig	SC	SAMEA2061708	GCA_001149125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/125/GCA_001149125.1_9803_7_35	-	6C
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.60164	50.4	-	JSHX01	764	5086	4349	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802127	GCA_000777235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/235/GCA_000777235.1_ASM77723v1	25373147	upec-37
Mycobacterium tuberculosis KT-0035	1400891	PRJNA219774	219774	Terrabacteria group	Actinobacteria	4.41437	65.5	-	JLRW01	8	4290	4106	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360569	GCA_000673855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/855/GCA_000673855.1_Myco_tube_KT-0035_V1	-	KT-0035
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.01526	37.9	-	MJQG01	28	3077	3006	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358020	GCA_001827275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/275/GCA_001827275.1_ASM182727v1	-	BCW_4292
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73332	52	-	CJXU01	44	4885	4541	3/21/15	2/27/17	Contig	SC	SAMEA2056366	GCA_001093385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/385/GCA_001093385.1_9953_5_45	-	A374
Staphylococcus aureus M0030	1388006	PRJNA216175	216175	Terrabacteria group	Firmicutes	2.91632	32.9	-	JBWA01	84	3100	2894	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325130	GCA_000551225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/225/GCA_000551225.1_Stap_aure_M0030_V1	-	M0030
Staphylococcus aureus M0031	1388007	PRJNA216176	216176	Terrabacteria group	Firmicutes	2.84312	32.8	-	JBWB01	38	2978	2792	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325131	GCA_000551245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/245/GCA_000551245.1_Stap_aure_M0031_V1	-	M0031
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93554	51.8	-	CJND01	62	5138	4747	3/21/15	2/27/17	Contig	SC	SAMEA2160371	GCA_001093505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/505/GCA_001093505.1_10608_2_23	-	2012-009188
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.00873	37.9	-	MJQI01	39	3074	2976	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358022	GCA_001827295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/295/GCA_001827295.1_ASM182729v1	-	BCW_4294
Mycobacterium tuberculosis KT-0039	1400893	PRJNA219776	219776	Terrabacteria group	Actinobacteria	4.45922	65.2	-	JLRV01	18	4314	4082	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360571	GCA_000673875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/875/GCA_000673875.1_Myco_tube_KT-0039_V1	-	KT-0039
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.06968	50.7	-	JSIA01	743	5804	4798	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802124	GCA_000777265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/265/GCA_000777265.1_ASM77726v1	25373147	upec-34
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.04651	39.7	-	CLXR01	55	2257	2045	3/21/15	3/10/17	Contig	SC	SAMEA1029114	GCA_001149305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/305/GCA_001149305.1_6983_6_29	-	SMRU2333
Pseudomonas aeruginosa	287	PRJNA392234	392234	Proteobacteria	Gammaproteobacteria	6.46796	66.4	-	NKXU01	93	6153	5978	7/10/17	7/12/17	Contig	Bard College	SAMN07286081	GCA_002216445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/445/GCA_002216445.1_ASM221644v1	-	PaEB6
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.98772	38.8	-	LYZW01	101	3837	3652	6/17/16	3/20/17	Contig	JCVI	SAMN04993339	GCA_001664685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/685/GCA_001664685.1_ASM166468v1	-	CCF3
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.88578	57	-	NDCD01	175	6032	5745	6/8/17	6/10/17	Contig	JCVI	SAMN06218077	GCA_002180805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/805/GCA_002180805.1_ASM218080v1	-	39911
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	6.27049	63.9	-	CSZT01	1564	6551	6453	3/24/15	6/13/15	Scaffold	SC	SAMEA1317716	GCA_001214245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/245/GCA_001214245.1_7520_7_45	-	PAP165
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	4.90884	64.1	-	CSZJ01	59	5025	4974	3/24/15	6/13/15	Scaffold	SC	SAMEA1317713	GCA_001215125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/125/GCA_001215125.1_7520_7_36	-	PAP156
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.64148	57.1	-	NDCH01	135	5796	5542	6/8/17	6/10/17	Contig	JCVI	SAMN06218071	GCA_002180845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/845/GCA_002180845.1_ASM218084v1	-	40886
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.86579	38.9	-	LYZY01	125	3738	3580	6/17/16	3/20/17	Contig	JCVI	SAMN04993341	GCA_001664725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/725/GCA_001664725.1_ASM166472v1	-	CCF5
Pseudomonas aeruginosa	287	PRJNA392234	392234	Proteobacteria	Gammaproteobacteria	6.83683	66	-	NKXW01	99	6569	6343	7/10/17	7/12/17	Contig	Bard College	SAMN07286079	GCA_002216465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/465/GCA_002216465.1_ASM221646v1	-	Pae160
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.08241	39.5	-	CPOL01	59	2268	2046	3/23/15	3/10/17	Contig	SC	SAMEA770061	GCA_001149365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/365/GCA_001149365.1_5310_1_9	-	17F/4
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.80348	50.8	-	JSIB01	59	4950	4671	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802123	GCA_000777285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/285/GCA_000777285.1_ASM77728v1	25373147	upec-33
Mycobacterium tuberculosis KT-0041	1400894	PRJNA219777	219777	Terrabacteria group	Actinobacteria	4.39606	65.5	-	JLRU01	14	4296	4111	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360572	GCA_000673895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/895/GCA_000673895.1_Myco_tube_KT-0041_V1	-	KT-0041
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.01116	37.8	-	MJQH01	26	3043	2972	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358021	GCA_001827305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/305/GCA_001827305.1_ASM182730v1	-	BCW_4293
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74364	52.1	-	CJAS01	50	4930	4576	3/21/15	2/27/17	Contig	SC	SAMEA2162095	GCA_001093585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/585/GCA_001093585.1_10492_1_7	-	MDUST130
Staphylococcus aureus M0034	1388008	PRJNA216177	216177	Terrabacteria group	Firmicutes	2.87572	32.8	-	JBWC01	42	3043	2874	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325132	GCA_000551265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/265/GCA_000551265.1_Stap_aure_M0034_V1	-	M0034
Staphylococcus aureus M0036	1388009	PRJNA216178	216178	Terrabacteria group	Firmicutes	2.91439	32.8	-	JBWD01	65	3102	2920	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325133	GCA_000551285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/285/GCA_000551285.1_Stap_aure_M0036_V1	-	M0036
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74172	52.1	-	CJYJ01	42	4925	4572	3/21/15	2/27/17	Contig	SC	SAMEA2057366	GCA_001094085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/085/GCA_001094085.1_9953_5_65	-	LNT12
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.82977	37.9	-	MJQK01	14	2849	2782	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358024	GCA_001827345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/345/GCA_001827345.1_ASM182734v1	-	BCW_4296
Mycobacterium tuberculosis KT-0043	1400895	PRJNA219778	219778	Terrabacteria group	Actinobacteria	4.42122	65.5	-	JLRT01	16	4295	4096	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360573	GCA_000673915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/915/GCA_000673915.1_Myco_tube_KT-0043_V1	-	KT-0043
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.95802	50.6	-	JSID01	80	5138	4780	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802121	GCA_000777325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/325/GCA_000777325.1_ASM77732v1	25373147	upec-31
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.1106	39.6	-	CLJV01	63	2335	2119	3/21/15	3/11/17	Contig	SC	SAMEA1029141	GCA_001149425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/425/GCA_001149425.1_6925_8_2	-	SMRU2522
Pseudomonas aeruginosa	287	PRJNA392234	392234	Proteobacteria	Gammaproteobacteria	6.43701	66.4	-	NKYB01	90	6121	5924	7/10/17	7/12/17	Contig	Bard College	SAMN07286074	GCA_002216485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/485/GCA_002216485.1_ASM221648v1	-	Pae102
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.82545	38.9	-	LYZZ01	116	3689	3543	6/17/16	3/20/17	Contig	JCVI	SAMN04993343	GCA_001664735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/735/GCA_001664735.1_ASM166473v1	-	CCF6
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.55112	57.3	-	NDCF01	139	5674	5426	6/8/17	6/10/17	Contig	JCVI	SAMN06218075	GCA_002180855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/855/GCA_002180855.1_ASM218085v1	-	40862
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	6.16851	57.7	-	CSZG01	3718	5155	5103	3/24/15	6/13/15	Scaffold	SC	SAMEA1317693	GCA_001215425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/425/GCA_001215425.1_7520_7_33	-	PAP153
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	6.5657	57.8	-	CSZP01	3745	5603	5549	3/24/15	6/14/15	Scaffold	SC	SAMEA1317696	GCA_001215805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/805/GCA_001215805.1_7520_7_42	-	PAP162
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.58873	57.2	-	NDCI01	119	5736	5477	6/8/17	6/10/17	Contig	JCVI	SAMN06218070	GCA_002180885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/885/GCA_002180885.1_ASM218088v1	-	40888
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.89046	38.9	-	LZAA01	120	3765	3615	6/17/16	3/20/17	Contig	JCVI	SAMN04993345	GCA_001664755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/755/GCA_001664755.1_ASM166475v1	-	CCF7
Pseudomonas aeruginosa	287	PRJNA392234	392234	Proteobacteria	Gammaproteobacteria	6.33607	66.5	-	NKXV01	65	5988	5839	7/10/17	7/12/17	Contig	Bard College	SAMN07286080	GCA_002216505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/505/GCA_002216505.1_ASM221650v1	-	PaEB1
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.01705	39.8	-	CMJD01	43	2207	1999	3/23/15	3/10/17	Contig	SC	SAMEA1029348	GCA_001149465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/465/GCA_001149465.1_7038_7_7	-	SMRU3007
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.69646	50.7	-	JSIE01	88	4808	4503	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802120	GCA_000777355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/355/GCA_000777355.1_ASM77735v1	25373147	upec-30
Mycobacterium tuberculosis KT-0047	1400898	PRJNA219781	219781	Terrabacteria group	Actinobacteria	4.40115	65.6	-	JLRR01	13	4282	4102	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360576	GCA_000673935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/935/GCA_000673935.1_Myco_tube_KT-0047_V1	-	KT-0047
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.98586	37.9	-	MJQM01	16	3010	2937	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358026	GCA_001827375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/375/GCA_001827375.1_ASM182737v1	-	BCW_4298
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2770	204451	Proteobacteria	Gammaproteobacteria	4.75433	52	-	CJRS01	39	4922	4570	3/21/15	2/27/17	Contig	SC	SAMEA1687838	GCA_001094645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/645/GCA_001094645.1_8616_4_47	-	BCR170
Staphylococcus aureus M0037	1388010	PRJNA216179	216179	Terrabacteria group	Firmicutes	2.77737	32.7	-	JBWE01	61	2895	2772	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325134	GCA_000551305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/305/GCA_000551305.1_Stap_aure_M0037_V1	-	M0037
Staphylococcus aureus M0038	1388011	PRJNA216180	216180	Terrabacteria group	Firmicutes	2.88564	32.8	-	JBWF01	63	3075	2899	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325135	GCA_000551325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/325/GCA_000551325.1_Stap_aure_M0038_V1	-	M0038
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74247	52	-	CJUF01	64	4904	4544	3/21/15	2/27/17	Contig	SC	SAMEA1903921	GCA_001094745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/745/GCA_001094745.1_9475_6_94	-	D41342
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.07859	37.8	-	MJQL01	25	3148	3076	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358025	GCA_001827385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/385/GCA_001827385.1_ASM182738v1	-	BCW_4297
Mycobacterium tuberculosis KT-0048	1400899	PRJNA219782	219782	Terrabacteria group	Actinobacteria	4.46909	65.2	-	JLRQ01	11	4316	4081	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360577	GCA_000673955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/955/GCA_000673955.1_Myco_tube_KT-0048_V1	-	KT-0048
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.89736	50.7	-	JSIF01	103	5046	4686	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802119	GCA_000777375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/375/GCA_000777375.1_ASM77737v1	25373147	upec-3
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.17304	39.5	-	CLYP01	54	2401	2185	3/21/15	3/11/17	Contig	SC	SAMEA1028970	GCA_001149525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/525/GCA_001149525.1_6983_7_60	-	SMRU2364
Pseudomonas aeruginosa	287	PRJNA325248	325248	Proteobacteria	Gammaproteobacteria	6.34048	66.4	-	MVGW01	62	6042	5842	7/28/17	8/1/17	Contig	International Pseudomonas aeruginosa Consortium	SAMN06320146	GCA_002236985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/236/985/GCA_002236985.1_ASM223698v1	-	ATCC BAA-2109
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.93675	38.8	-	LZAB01	84	3815	3668	6/17/16	3/20/17	Contig	JCVI	SAMN04993349	GCA_001664765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/765/GCA_001664765.1_ASM166476v1	-	CCF8
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.76861	57.1	-	NDCN01	118	5893	5623	6/8/17	6/10/17	Contig	JCVI	SAMN06218120	GCA_002180895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/895/GCA_002180895.1_ASM218089v1	-	44829
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.16014	64.1	-	CSZW01	20	5445	5356	3/24/15	6/13/15	Scaffold	SC	SAMEA1317705	GCA_001215825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/825/GCA_001215825.1_7520_7_49	-	PAP169
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.15912	64.1	-	CSZF01	22	5394	5307	3/24/15	6/13/15	Scaffold	SC	SAMEA1317704	GCA_001216105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/105/GCA_001216105.1_7520_7_32	-	PAP152
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.80711	56.9	-	NDCO01	167	5980	5701	6/8/17	6/10/17	Contig	JCVI	SAMN06218119	GCA_002180925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/925/GCA_002180925.1_ASM218092v1	-	44830
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.7996	39	-	LZAC01	71	3649	3521	6/17/16	3/20/17	Contig	JCVI	SAMN04993350	GCA_001664805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/805/GCA_001664805.1_ASM166480v1	-	CCF9
Pseudomonas aeruginosa	287	PRJNA325248	325248	Proteobacteria	Gammaproteobacteria	6.34512	66.5	-	MVHA01	27	6005	5854	7/28/17	8/1/17	Contig	International Pseudomonas aeruginosa Consortium	SAMN06320150	GCA_002237015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/015/GCA_002237015.1_ASM223701v1	-	ATCC BAA-2113
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.04358	39.7	-	CMLI01	61	2234	2036	3/23/15	3/11/17	Contig	SC	SAMEA1029230	GCA_001149545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/545/GCA_001149545.1_7054_5_6	-	SMRU3054
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.80691	50.6	-	JSIG01	231	4964	4496	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802118	GCA_000777395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/395/GCA_000777395.1_ASM77739v1	25373147	upec-29
Mycobacterium tuberculosis KT-0051	1400902	PRJNA219785	219785	Terrabacteria group	Actinobacteria	4.44895	65.4	-	JLRP01	11	4305	4100	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360580	GCA_000673975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/975/GCA_000673975.1_Myco_tube_KT-0051_V1	-	KT-0051
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.96557	37.9	-	MJQN01	20	3052	2961	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358027	GCA_001827415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/415/GCA_001827415.1_ASM182741v1	-	BCW_4299
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93403	51.8	-	CJUT01	50	5136	4753	3/21/15	2/27/17	Contig	SC	SAMEA2058235	GCA_001094765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/765/GCA_001094765.1_9870_8_28	-	2007-012990
Staphylococcus aureus M0040	1388013	PRJNA216182	216182	Terrabacteria group	Firmicutes	2.90089	32.9	-	JBVG01	69	3079	2896	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325137	GCA_000551345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/345/GCA_000551345.1_Stap_aure_M0040_V1	-	M0040
Staphylococcus aureus M0041	1388014	PRJNA216183	216183	Terrabacteria group	Firmicutes	2.87312	32.8	-	JBWG01	45	3015	2840	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325138	GCA_000551365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/365/GCA_000551365.1_Stap_aure_M0041_V1	-	M0041
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70259	52.1	-	CJUE01	45	4866	4508	3/21/15	2/27/17	Contig	SC	SAMEA1903919	GCA_001095125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/125/GCA_001095125.1_9475_6_93	-	A40566
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.89074	37.9	-	MJQO01	14	2920	2831	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358028	GCA_001827435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/435/GCA_001827435.1_ASM182743v1	-	BCW_4300
Mycobacterium tuberculosis KT-0053	1400904	PRJNA219787	219787	Terrabacteria group	Actinobacteria	4.40093	65.5	-	JLRO01	9	4271	4090	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360582	GCA_000673995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/673/995/GCA_000673995.1_Myco_tube_KT-0053_V1	-	KT-0053
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.15379	50.5	-	JSIH01	102	5280	4952	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802117	GCA_000777415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/415/GCA_000777415.1_ASM77741v1	25373147	upec-289
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.03935	39.7	-	CRFJ01	38	2218	1987	3/22/15	3/10/17	Contig	SC	SAMEA1025550	GCA_001149565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/565/GCA_001149565.1_6736_4_2	-	SMRU1202
Pseudomonas aeruginosa	287	PRJNA325248	325248	Proteobacteria	Gammaproteobacteria	6.35018	66.4	-	MVGV01	43	6009	5842	7/28/17	8/1/17	Contig	International Pseudomonas aeruginosa Consortium	SAMN06320145	GCA_002237025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/025/GCA_002237025.1_ASM223702v1	-	ATCC BAA-2108
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.78447	38.9	-	LZAF01	84	3608	3432	6/17/16	3/20/17	Contig	JCVI	SAMN04993355	GCA_001664815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/815/GCA_001664815.1_ASM166481v1	-	CCF12
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.65974	57.1	-	NDCP01	121	5805	5561	6/8/17	6/10/17	Contig	JCVI	SAMN06218118	GCA_002180935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/935/GCA_002180935.1_ASM218093v1	-	44831
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	7.97511	53.6	-	CSXB01	108	7836	7751	3/24/15	6/13/15	Scaffold	SC	SAMEA1464848	GCA_001216285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/285/GCA_001216285.1_7396_7_5	-	PAP053
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.14783	64.1	-	CSZV01	22	5320	5232	3/24/15	6/13/15	Scaffold	SC	SAMEA1317709	GCA_001216325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/325/GCA_001216325.1_7520_7_47	-	PAP167
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.66237	57.1	-	NDCR01	131	5849	5583	6/8/17	6/10/17	Contig	JCVI	SAMN06218116	GCA_002180965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/965/GCA_002180965.1_ASM218096v1	-	45705
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.8811	38.9	-	LZAG01	115	3760	3605	6/17/16	3/20/17	Contig	JCVI	SAMN04993357	GCA_001664835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/835/GCA_001664835.1_ASM166483v1	-	CCF13
Pseudomonas aeruginosa	287	PRJNA325248	325248	Proteobacteria	Gammaproteobacteria	6.59078	66.4	-	MVGX01	26	6332	6156	7/28/17	8/1/17	Contig	International Pseudomonas aeruginosa Consortium	SAMN06320147	GCA_002237075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/075/GCA_002237075.1_ASM223707v1	-	ATCC BAA-2110
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0586	39.5	-	CNPW02	175	2203	2009	3/23/15	3/11/17	Contig	SC	SAMEA1032736	GCA_001149605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/605/GCA_001149605.2_6952_4_20	-	492706
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.26051	50.6	-	JSII01	126	5465	5057	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802116	GCA_000777435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/435/GCA_000777435.1_ASM77743v1	25373147	upec-288
Mycobacterium tuberculosis KT-0056	1400907	PRJNA219790	219790	Terrabacteria group	Actinobacteria	4.54653	64.9	-	JLRN01	9	4316	4101	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360585	GCA_000674015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/015/GCA_000674015.1_Myco_tube_KT-0056_V1	-	KT-0056
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.12942	37.9	-	MJQP01	39	3240	3115	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358029	GCA_001827455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/455/GCA_001827455.1_ASM182745v1	-	BCW_4301
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69882	52.1	-	CJBF01	43	4855	4505	3/21/15	2/27/17	Contig	SC	SAMEA2146474	GCA_001095145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/145/GCA_001095145.1_10492_1_9	-	MDUST135
Staphylococcus aureus M0042	1388015	PRJNA216184	216184	Terrabacteria group	Firmicutes	2.89935	32.8	-	JBWH01	81	3091	2896	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325139	GCA_000551385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/385/GCA_000551385.1_Stap_aure_M0042_V1	-	M0042
Staphylococcus aureus M0043	1388016	PRJNA216185	216185	Terrabacteria group	Firmicutes	2.92114	32.9	-	JBWI01	82	3107	2909	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325140	GCA_000551405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/405/GCA_000551405.1_Stap_aure_M0043_V1	-	M0043
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82265	52.1	-	CJJB01	43	5009	4646	3/21/15	2/27/17	Contig	SC	SAMEA1929443	GCA_001095305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/305/GCA_001095305.1_10592_2_31	-	3164
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.96783	37.9	-	MJQQ01	19	2996	2921	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358030	GCA_001827465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/465/GCA_001827465.1_ASM182746v1	-	BCW_4302
Mycobacterium tuberculosis KT-0057	1400908	PRJNA219791	219791	Terrabacteria group	Actinobacteria	4.57262	64.8	-	JLRM01	15	4359	4115	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360586	GCA_000674035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/035/GCA_000674035.1_Myco_tube_KT-0057_V1	-	KT-0057
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.06908	50.5	-	JSIJ01	97	5245	4867	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802115	GCA_000777455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/455/GCA_000777455.1_ASM77745v1	25373147	upec-287
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.1013	39.5	-	CRUR01	70	2305	2071	3/23/15	3/10/17	Contig	SC	SAMEA1025563	GCA_001149625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/625/GCA_001149625.1_6805_6_16	-	SMRU1720
Pseudomonas aeruginosa	287	PRJNA325248	325248	Proteobacteria	Gammaproteobacteria	6.31127	66.5	-	MVGZ01	29	5988	5826	7/28/17	8/1/17	Contig	International Pseudomonas aeruginosa Consortium	SAMN06320149	GCA_002237085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/085/GCA_002237085.1_ASM223708v1	-	ATCC BAA-2112
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.87106	38.9	-	LZAJ01	120	3746	3589	6/17/16	3/20/17	Contig	JCVI	SAMN04993363	GCA_001664855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/855/GCA_001664855.1_ASM166485v1	-	CCF16
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.39543	57.4	-	NDCS01	97	5512	5286	6/8/17	6/10/17	Contig	JCVI	SAMN06218115	GCA_002180975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/975/GCA_002180975.1_ASM218097v1	-	45706
Mycobacterium abscessus	36809	PRJEB2779	204475	Terrabacteria group	Actinobacteria	9.77239	63.9	-	CSXD01	146	10962	10844	3/24/15	6/13/15	Scaffold	SC	SAMEA1464878	GCA_001216945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/945/GCA_001216945.1_7396_7_8	-	PAP056
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	7.08399	64	-	FSBR01	2743	7835	7727	12/14/16	12/14/16	Scaffold	SC	SAMEA2071372	GCA_900132095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/095/GCA_900132095.1_10665_4_55	-	310
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.8988	56.7	-	NDCW01	144	6101	5802	6/8/17	6/10/17	Contig	JCVI	SAMN06218099	GCA_002181005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/005/GCA_002181005.1_ASM218100v1	-	42810
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.86365	38.9	-	LZAK01	121	3748	3578	6/17/16	3/20/17	Contig	JCVI	SAMN04993365	GCA_001664885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/885/GCA_001664885.1_ASM166488v1	-	CCF17
Pseudomonas aeruginosa	287	PRJNA325248	325248	Proteobacteria	Gammaproteobacteria	6.30231	66.5	-	MVGY01	33	5968	5801	7/28/17	8/21/17	Contig	International Pseudomonas aeruginosa Consortium	SAMN06320148	GCA_002238215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/215/GCA_002238215.1_ASM223821v1	-	ATCC BAA-2111
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04108	39.7	-	CNPH02	161	2232	2031	3/23/15	3/5/17	Contig	SC	SAMEA1032585	GCA_001149705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/705/GCA_001149705.2_6952_4_12	-	459747
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.33691	50.5	-	JSIK01	155	5599	5181	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802114	GCA_000777475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/475/GCA_000777475.1_ASM77747v1	25373147	upec-286
Mycobacterium tuberculosis KT-0058	1400909	PRJNA219792	219792	Terrabacteria group	Actinobacteria	4.39955	65.5	-	JLRL01	7	4280	4095	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360587	GCA_000674055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/055/GCA_000674055.1_Myco_tube_KT-0058_V1	-	KT-0058
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.98172	37.8	-	MJQR01	23	3028	2942	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358032	GCA_001827495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/495/GCA_001827495.1_ASM182749v1	-	BCW_4304
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73218	52	-	CJYE01	43	4876	4529	3/21/15	2/27/17	Contig	SC	SAMEA2056354	GCA_001095325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/325/GCA_001095325.1_9953_5_6	-	A272
Staphylococcus aureus M0044	1388017	PRJNA216186	216186	Terrabacteria group	Firmicutes	2.898	32.8	-	JBWJ01	70	3086	2902	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325141	GCA_000551425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/425/GCA_000551425.1_Stap_aure_M0044_V1	-	M0044
Staphylococcus aureus M0046	1388018	PRJNA216187	216187	Terrabacteria group	Firmicutes	2.85435	32.9	-	JBWK01	41	2983	2797	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325142	GCA_000551445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/445/GCA_000551445.1_Stap_aure_M0046_V1	-	M0046
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.74662	52.1	-	CJOG01	58	4921	4555	3/21/15	2/27/17	Contig	SC	SAMEA1406334	GCA_001095705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/705/GCA_001095705.1_7468_7_80	-	IB5369
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.904	37.9	-	MJQS01	31	2938	2865	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358033	GCA_001827505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/505/GCA_001827505.1_ASM182750v1	-	BCW_4305
Mycobacterium tuberculosis KT-0063	1400911	PRJNA219794	219794	Terrabacteria group	Actinobacteria	4.39684	65.6	-	JLRK01	15	4285	4084	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360589	GCA_000674075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/075/GCA_000674075.1_Myco_tube_KT-0063_V1	-	KT-0063
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.12142	50.3	-	JSIL01	142	5227	4878	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802113	GCA_000777495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/495/GCA_000777495.1_ASM77749v1	25373147	upec-285
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.19347	39.5	-	CPRV01	68	2418	2187	3/23/15	3/4/17	Contig	SC	SAMEA1020674	GCA_001149725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/725/GCA_001149725.1_6569_4_13	-	PT3026
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.65667	65.9	-	NLAZ01	165	6427	6102	8/1/17	8/21/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07327866	GCA_002239415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/415/GCA_002239415.1_ASM223941v1	-	Env_58
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	4.0116	38.9	-	LZAL01	83	3907	3756	6/17/16	3/20/17	Contig	JCVI	SAMN04993366	GCA_001664895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/895/GCA_001664895.1_ASM166489v1	-	CCF18
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.87223	56.9	-	NDCU01	167	6062	5786	6/8/17	6/10/17	Contig	JCVI	SAMN06218113	GCA_002181015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/015/GCA_002181015.1_ASM218101v1	-	45708
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	6.1007	57.9	-	FSBZ01	3287	9599	9550	12/14/16	12/14/16	Scaffold	SC	SAMEA2259684	GCA_900132565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/132/565/GCA_900132565.1_11893_6_40	-	879
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	6.92076	57.8	-	FSGV01	41	6832	6752	12/14/16	12/14/16	Scaffold	SC	SAMEA2070698	GCA_900135405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/405/GCA_900135405.1_10625_4_57	-	57
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.82094	57	-	NDCY01	155	5966	5680	6/8/17	6/10/17	Contig	JCVI	SAMN06218097	GCA_002181045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/045/GCA_002181045.1_ASM218104v1	-	42812
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.82247	39	-	LZAN01	118	3673	3525	6/17/16	3/20/17	Contig	JCVI	SAMN04993370	GCA_001664905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/905/GCA_001664905.1_ASM166490v1	-	CCF20
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.32287	66.4	-	NLBD01	100	6053	5857	8/1/17	8/21/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07327858	GCA_002239425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/425/GCA_002239425.1_ASM223942v1	-	Env_14
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10159	39.6	-	CKTC01	64	2324	2068	3/21/15	3/6/17	Contig	SC	SAMEA1025474	GCA_001149825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/825/GCA_001149825.1_6807_3_5	-	SMRU1613
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.83645	50.7	-	JSIM01	795	5617	4658	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802112	GCA_000777515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/515/GCA_000777515.1_ASM77751v1	25373147	upec-284
Mycobacterium tuberculosis KT-0064	1400912	PRJNA219795	219795	Terrabacteria group	Actinobacteria	4.48181	65.2	-	JLRJ01	13	4302	4094	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360590	GCA_000674095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/095/GCA_000674095.1_Myco_tube_KT-0064_V1	-	KT-0064
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.0129	37.8	-	MJQT01	34	3075	2963	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358034	GCA_001827535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/535/GCA_001827535.1_ASM182753v1	-	BCW_4306
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.78403	52.1	-	CJVP01	46	4979	4623	3/21/15	2/27/17	Contig	SC	SAMEA2058428	GCA_001095885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/885/GCA_001095885.1_9870_8_61	-	BC2011-1325
Staphylococcus aureus M0048	1388019	PRJNA216188	216188	Terrabacteria group	Firmicutes	2.91901	32.9	-	JBWL01	83	3101	2904	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325143	GCA_000551465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/465/GCA_000551465.1_Stap_aure_M0048_V1	-	M0048
Staphylococcus aureus M0049	1388020	PRJNA216189	216189	Terrabacteria group	Firmicutes	2.86668	32.8	-	JBWM01	45	3035	2855	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325144	GCA_000551485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/485/GCA_000551485.1_Stap_aure_M0049_V1	-	M0049
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69719	52.1	-	CJIU01	44	4863	4499	3/21/15	2/27/17	Contig	SC	SAMEA1929452	GCA_001095965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/965/GCA_001095965.1_10592_2_18	-	6289
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.97902	37.8	-	MJQU01	17	3035	2946	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358035	GCA_001827545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/545/GCA_001827545.1_ASM182754v1	-	BCW_4307
Mycobacterium tuberculosis KT-0070	1400914	PRJNA219797	219797	Terrabacteria group	Actinobacteria	4.39059	65.6	-	JLRI01	16	4282	4096	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360592	GCA_000674115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/115/GCA_000674115.1_Myco_tube_KT-0070_V1	-	KT-0070
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.69329	50.7	-	JSIN01	66	4817	4566	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802110	GCA_000777535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/535/GCA_000777535.1_ASM77753v1	25373147	upec-282
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.997	39.7	-	CNZF02	316	2106	1943	3/23/15	3/11/17	Contig	SC	SAMEA1463110	GCA_001149945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/945/GCA_001149945.2_7553_5_59	-	NP7113
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.32733	66.4	-	NLBE01	100	6048	5852	8/1/17	8/21/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07327857	GCA_002239445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/445/GCA_002239445.1_ASM223944v1	-	Env_12
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	4.03329	38.9	-	LZAO01	80	3915	3772	6/17/16	3/20/17	Contig	JCVI	SAMN04993372	GCA_001664915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/915/GCA_001664915.1_ASM166491v1	-	CCF21
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.53921	57.2	-	NDCX01	105	5660	5404	6/8/17	6/10/17	Contig	JCVI	SAMN06218098	GCA_002181055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/055/GCA_002181055.1_ASM218105v1	-	42811
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	6.10625	63.3	-	FSHT01	256	6236	6181	12/14/16	12/14/16	Scaffold	SC	SAMEA2259610	GCA_900135715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/135/715/GCA_900135715.1_11861_7_70	-	805
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	6.26132	55.6	-	FVNB01	2354	9889	9841	3/10/17	3/10/17	Scaffold	SC	SAMEA2275847	GCA_900136335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/335/GCA_900136335.1_12163_2_81	-	1121
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.96022	56.6	-	NDCZ01	140	6079	5799	6/8/17	6/10/17	Contig	JCVI	SAMN06218096	GCA_002181085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/085/GCA_002181085.1_ASM218108v1	-	42814
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.87946	38.9	-	LZAP01	123	3748	3600	6/17/16	3/20/17	Contig	JCVI	SAMN04993374	GCA_001664965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/965/GCA_001664965.1_ASM166496v1	-	CCF22
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.38979	66.5	-	NLAY01	95	6081	5883	8/1/17	8/21/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07327886	GCA_002239465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/465/GCA_002239465.1_ASM223946v1	-	Env_62
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.11345	39.7	-	CMEL01	62	2355	2135	3/21/15	3/4/17	Contig	SC	SAMEA1029169	GCA_001150005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/005/GCA_001150005.1_7011_4_8	-	SMRU2768
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.14011	50.6	-	JSIO01	88	5321	5041	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802109	GCA_000777555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/555/GCA_000777555.1_ASM77755v1	25373147	upec-281
Mycobacterium tuberculosis KT-0071	1400915	PRJNA219798	219798	Terrabacteria group	Actinobacteria	4.42509	65.4	-	JLRH01	12	4292	4096	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360593	GCA_000674135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/135/GCA_000674135.1_Myco_tube_KT-0071_V1	-	KT-0071
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.14942	37.9	-	MJQV01	30	3168	3073	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358036	GCA_001827575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/575/GCA_001827575.1_ASM182757v1	-	BCW_4308
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74699	52.1	-	CJTV01	47	4906	4542	3/21/15	2/27/17	Contig	SC	SAMEA1903897	GCA_001096485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/485/GCA_001096485.1_9475_6_69	-	1029451
Staphylococcus aureus M0051	1388022	PRJNA216191	216191	Terrabacteria group	Firmicutes	2.89748	32.8	-	JBWN01	65	3074	2894	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325146	GCA_000551505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/505/GCA_000551505.1_Stap_aure_M0051_V1	-	M0051
Staphylococcus aureus M0052	1388023	PRJNA216192	216192	Terrabacteria group	Firmicutes	2.90463	32.9	-	JBWO01	56	3082	2913	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325147	GCA_000551525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/525/GCA_000551525.1_Stap_aure_M0052_V1	-	M0052
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93267	51.8	-	CJNP01	53	5133	4745	3/21/15	2/27/17	Contig	SC	SAMEA2144171	GCA_001096505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/505/GCA_001096505.1_10608_2_52	-	2012-012131
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.96437	37.9	-	MJQW01	29	3012	2947	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03277804	GCA_001827585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/585/GCA_001827585.1_ASM182758v1	-	NRRL B-33997
Mycobacterium tuberculosis KT-0072	1400916	PRJNA219799	219799	Terrabacteria group	Actinobacteria	4.38886	65.6	-	JLRG01	7	4272	4087	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360594	GCA_000674155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/155/GCA_000674155.1_Myco_tube_KT-0072_V1	-	KT-0072
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.18331	50.5	-	JSIQ01	312	5538	4868	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802107	GCA_000777585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/585/GCA_000777585.1_ASM77758v1	25373147	upec-28
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.1688	39.4	-	CLZH01	59	2394	2174	3/21/15	3/4/17	Contig	SC	SAMEA1028903	GCA_001150085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/085/GCA_001150085.1_6983_8_86	-	SMRU2390
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.40799	66.4	-	NLBA01	79	6140	5954	8/1/17	8/21/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07327864	GCA_002239485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/485/GCA_002239485.1_ASM223948v1	-	Env_47
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.877	38.9	-	LZAQ01	122	3746	3601	6/17/16	3/20/17	Contig	JCVI	SAMN04993377	GCA_001664975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/975/GCA_001664975.1_ASM166497v1	-	CCF23
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.46988	57.3	-	NDDA01	97	5588	5350	6/8/17	6/10/17	Contig	JCVI	SAMN06218095	GCA_002181095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/095/GCA_002181095.1_ASM218109v1	-	42859
Mycobacterium abscessus subsp. massiliense	1962118	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.49867	60.7	-	FVNZ01	2159	4851	4802	3/10/17	3/10/17	Scaffold	SC	SAMEA2156862	GCA_900136875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/136/875/GCA_900136875.1_10665_2_81	-	551
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	6.23954	61.2	-	FSLJ01	2409	5773	5685	12/14/16	12/14/16	Scaffold	SC	SAMEA2275799	GCA_900137705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/137/705/GCA_900137705.1_12163_2_46	-	1073
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.65752	57.1	-	NDDB01	129	5835	5577	6/8/17	6/10/17	Contig	JCVI	SAMN06218094	GCA_002181105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/105/GCA_002181105.1_ASM218110v1	-	43328
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.84761	38.9	-	LZAS01	74	3693	3562	6/17/16	3/20/17	Contig	JCVI	SAMN04993379	GCA_001664985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/664/985/GCA_001664985.1_ASM166498v1	-	CCF25
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.38123	66.4	-	NLBB01	101	6086	5891	8/1/17	8/21/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07327861	GCA_002239505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/505/GCA_002239505.1_ASM223950v1	-	Env_32
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.07459	39.6	-	CMOQ01	60	2254	1994	3/23/15	3/15/17	Contig	SC	SAMEA2061710	GCA_001150165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/165/GCA_001150165.1_9803_7_38	-	type strain: N
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.04652	50.4	-	JSIR01	132	5163	4834	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802104	GCA_000777605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/605/GCA_000777605.1_ASM77760v1	25373147	upec-277
Mycobacterium tuberculosis KT-0075	1400918	PRJNA219801	219801	Terrabacteria group	Actinobacteria	4.46262	65.5	-	JLRF01	9	4347	4164	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360596	GCA_000674175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/175/GCA_000674175.1_Myco_tube_KT-0075_V1	-	KT-0075
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.99084	37.9	-	MJQX01	16	3077	2948	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03277806	GCA_001827615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/615/GCA_001827615.1_ASM182761v1	-	NRRL B-57040
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74472	52.1	-	CIWB01	46	4926	4570	3/21/15	2/27/17	Contig	SC	SAMEA2066534	GCA_001096745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/745/GCA_001096745.1_10209_5_59	-	UI3313
Staphylococcus aureus M0054	1388024	PRJNA216193	216193	Terrabacteria group	Firmicutes	2.89826	32.9	-	JBWP01	24	3046	2875	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325148	GCA_000551545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/545/GCA_000551545.1_Stap_aure_M0054_V1	-	M0054
Staphylococcus aureus M0057	1388026	PRJNA216195	216195	Terrabacteria group	Firmicutes	2.87067	32.8	-	JBWQ01	52	3022	2848	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325150	GCA_000551565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/565/GCA_000551565.1_Stap_aure_M0057_V1	-	M0057
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93296	51.8	-	CJWN01	66	5148	4752	3/21/15	2/27/17	Contig	SC	SAMEA2056666	GCA_001096965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/965/GCA_001096965.1_9870_8_89	-	01-2012-002666
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.98863	37.8	-	MJRC01	16	3038	2941	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358297	GCA_001827625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/625/GCA_001827625.1_ASM182762v1	-	BCW_4758
Mycobacterium tuberculosis KT-0077	1400920	PRJNA219803	219803	Terrabacteria group	Actinobacteria	4.40777	65.6	-	JLRE01	6	4293	4098	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360598	GCA_000674195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/195/GCA_000674195.1_Myco_tube_KT-0077_V1	-	KT-0077
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.21373	50.7	-	JSIS01	133	5473	5101	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802103	GCA_000777625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/625/GCA_000777625.1_ASM77762v1	25373147	upec-276
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05284	39.6	-	CNNW02	134	2256	2045	3/23/15	3/11/17	Contig	SC	SAMEA1032419	GCA_001150225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/225/GCA_001150225.2_6925_1_68	-	R34-3050
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.19599	66.5	-	NLBC01	63	5932	5765	8/1/17	8/21/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07327860	GCA_002239535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/535/GCA_002239535.1_ASM223953v1	-	Env_16
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.93977	38.8	-	LYZO01	115	3808	3641	6/17/16	3/20/17	Contig	JCVI	SAMN04993415	GCA_001665005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/005/GCA_001665005.1_ASM166500v1	-	CCF35
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.65738	57.1	-	NDDC01	130	5819	5573	6/8/17	6/10/17	Contig	JCVI	SAMN06218093	GCA_002181145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/145/GCA_002181145.1_ASM218114v1	-	43329
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	5.98236	63.9	-	FSNO01	2336	5736	5647	12/14/16	12/14/16	Scaffold	SC	SAMEA2070413	GCA_900139575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/575/GCA_900139575.1_10625_5_49	-	134
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	7.04297	64	-	FSNU01	3410	8255	8191	12/14/16	12/14/16	Scaffold	SC	SAMEA1967818	GCA_900139665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/139/665/GCA_900139665.1_10660_1_10	-	642
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.61256	57.2	-	NDDD01	105	5698	5463	6/8/17	6/10/17	Contig	JCVI	SAMN06218092	GCA_002181165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/165/GCA_002181165.1_ASM218116v1	-	43331
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.80336	39	-	LYZQ01	112	3643	3498	6/17/16	3/20/17	Contig	JCVI	SAMN04993417	GCA_001665045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/045/GCA_001665045.1_ASM166504v1	-	CCF37
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.63568	66.3	-	NLBF01	104	6334	6115	8/1/17	8/21/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07327856	GCA_002239545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/545/GCA_002239545.1_ASM223954v1	-	Env_11
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07895	39.6	-	CRSJ01	61	2310	2090	3/22/15	3/11/17	Contig	SC	SAMEA1025507	GCA_001150245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/245/GCA_001150245.1_6805_2_6	-	SMRU1422
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.09958	50.6	-	JSIT01	102	5312	4936	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802101	GCA_000777655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/655/GCA_000777655.1_ASM77765v1	25373147	upec-274
Mycobacterium tuberculosis KT-0078	1400921	PRJNA219804	219804	Terrabacteria group	Actinobacteria	4.39816	65.5	-	JLRD01	3	4284	4103	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360599	GCA_000674215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/215/GCA_000674215.1_Myco_tube_KT-0078_V1	-	KT-0078
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.87942	37.9	-	MJRD01	11	2928	2842	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358299	GCA_001827645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/645/GCA_001827645.1_ASM182764v1	-	BCW_4760
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72047	52	-	CIYR01	41	4873	4520	3/21/15	2/27/17	Contig	SC	SAMEA2142598	GCA_001096985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/985/GCA_001096985.1_10425_1_3	-	np74
Staphylococcus aureus M0058	1388027	PRJNA216196	216196	Terrabacteria group	Firmicutes	2.90152	32.8	-	JBWR01	51	3077	2907	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325151	GCA_000551585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/585/GCA_000551585.1_Stap_aure_M0058_V1	-	M0058
Staphylococcus aureus M0061	1388028	PRJNA216197	216197	Terrabacteria group	Firmicutes	2.90155	32.9	-	JBWS01	30	3057	2886	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325152	GCA_000551605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/605/GCA_000551605.1_Stap_aure_M0061_V1	-	M0061
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.59564	52.2	-	CJXB01	49	4748	4413	3/21/15	2/27/17	Contig	SC	SAMEA2057246	GCA_001097005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/005/GCA_001097005.1_9953_5_23	-	A341
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.95113	37.8	-	MJRE01	12	3012	2936	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358300	GCA_001827665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/665/GCA_001827665.1_ASM182766v1	-	BCW_4761
Mycobacterium tuberculosis KT-0080	1400923	PRJNA219806	219806	Terrabacteria group	Actinobacteria	4.3926	65.5	-	JLRB01	7	4270	4088	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360601	GCA_000674235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/235/GCA_000674235.1_Myco_tube_KT-0080_V1	-	KT-0080
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.92755	50.7	-	JSIU01	102	5105	4791	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802100	GCA_000777675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/675/GCA_000777675.1_ASM77767v1	25373147	upec-273
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.06733	39.8	-	CMPG01	44	2279	2054	3/23/15	3/11/17	Contig	SC	SAMEA2061719	GCA_001150345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/345/GCA_001150345.1_9803_7_52	-	34
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.40793	66.4	-	NLBG01	95	6137	5940	8/1/17	8/21/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07327855	GCA_002239565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/565/GCA_002239565.1_ASM223956v1	-	Env_1
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.98091	39	-	LYZS01	131	3868	3719	6/17/16	3/20/17	Contig	JCVI	SAMN04993419	GCA_001665055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/055/GCA_001665055.1_ASM166505v1	-	CCF39
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.64865	57.1	-	NDDI01	131	5820	5544	6/8/17	6/10/17	Contig	JCVI	SAMN06218087	GCA_002181175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/175/GCA_002181175.1_ASM218117v1	-	43422
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	3.09868	60.7	-	FSOQ01	1945	2710	2662	12/14/16	12/14/16	Scaffold	SC	SAMEA2144703	GCA_900140235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/140/235/GCA_900140235.1_10665_2_90	-	647
Mycobacterium abscessus subsp. abscessus	1185650	PRJEB2779	204475	Terrabacteria group	Actinobacteria	7.73185	51.5	-	FSQV01	285	6468	6389	12/14/16	12/14/16	Scaffold	SC	SAMEA2275861	GCA_900141655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/141/655/GCA_900141655.1_12163_2_92	-	1135
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.84004	56.9	-	NDDJ01	151	6024	5741	6/8/17	6/10/17	Contig	JCVI	SAMN06218086	GCA_002181185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/185/GCA_002181185.1_ASM218118v1	-	44808
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	4.03279	38.9	-	LYZU01	82	3919	3776	6/17/16	3/20/17	Contig	JCVI	SAMN04993422	GCA_001665065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/065/GCA_001665065.1_ASM166506v1	-	CCF42
Pseudomonas aeruginosa	287	PRJNA393931	393931	Proteobacteria	Gammaproteobacteria	7.04296	66	-	NMPU01	588	6851	6480	8/22/17	8/24/17	Contig	"Faculte de Medecine, Universite Paris-Sud"	SAMN07344899	GCA_002263405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/405/GCA_002263405.1_ASM226340v1	-	53012
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.03611	39.7	-	CNAJ01	40	2259	2032	3/22/15	3/10/17	Contig	SC	SAMEA1022788	GCA_001150385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/385/GCA_001150385.1_6930_7_10	-	232
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.07369	50.8	-	JSIV01	86	5264	4928	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802099	GCA_000777695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/695/GCA_000777695.1_ASM77769v1	25373147	upec-271
Mycobacterium tuberculosis KT-0083	1400924	PRJNA219807	219807	Terrabacteria group	Actinobacteria	4.43115	65.5	-	JLRA01	8	4309	4124	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360602	GCA_000674255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/255/GCA_000674255.1_Myco_tube_KT-0083_V1	-	KT-0083
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.07829	37.8	-	MJRF01	18	3166	3073	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358301	GCA_001827695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/695/GCA_001827695.1_ASM182769v1	-	BCW_4762
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7435	52.1	-	CIVE01	46	4928	4578	3/21/15	2/27/17	Contig	SC	SAMEA2066523	GCA_001097145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/145/GCA_001097145.1_10209_5_23	-	LNT1148
Staphylococcus aureus M0063	1388030	PRJNA216199	216199	Terrabacteria group	Firmicutes	2.86119	32.9	-	JBWT01	45	2993	2830	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325154	GCA_000551625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/625/GCA_000551625.1_Stap_aure_M0063_V1	-	M0063
Staphylococcus aureus M0064	1388031	PRJNA216200	216200	Terrabacteria group	Firmicutes	2.86911	32.8	-	JBWU01	44	3029	2860	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325155	GCA_000551645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/645/GCA_000551645.1_Stap_aure_M0064_V1	-	M0064
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82598	52	-	CJLM01	43	5031	4660	3/21/15	2/27/17	Contig	SC	SAMEA1930187	GCA_001097165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/165/GCA_001097165.1_10593_2_83	-	E00-6172
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.00505	37.8	-	MJRG01	23	3062	2990	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358302	GCA_001827715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/715/GCA_001827715.1_ASM182771v1	-	BCW_4763
Mycobacterium tuberculosis KT-0084	1400925	PRJNA219808	219808	Terrabacteria group	Actinobacteria	4.41664	65.5	-	JLQZ01	10	4287	4105	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360603	GCA_000674275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/275/GCA_000674275.1_Myco_tube_KT-0084_V1	-	KT-0084
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.00042	50.8	-	JSIY01	152	5232	4816	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802096	GCA_000777735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/735/GCA_000777735.1_ASM77773v1	25373147	upec-269
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.1048	39.7	-	CNRE02	165	2273	2060	3/23/15	3/11/17	Contig	SC	SAMEA1032645	GCA_001150405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/405/GCA_001150405.2_6999_1_11	-	R34-3194
Pseudomonas aeruginosa	287	PRJNA393931	393931	Proteobacteria	Gammaproteobacteria	7.05084	66	-	NMPT01	383	6875	6535	8/22/17	8/24/17	Contig	"Faculte de Medecine, Universite Paris-Sud"	SAMN07344900	GCA_002263435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/435/GCA_002263435.1_ASM226343v1	-	53014
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	4.03245	39.1	-	LYZV01	91	3904	3767	6/17/16	3/20/17	Contig	JCVI	SAMN04993338	GCA_001665095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/095/GCA_001665095.1_ASM166509v1	-	CCF2
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.67263	57.1	-	NDDK01	87	5725	5476	6/8/17	6/10/17	Contig	JCVI	SAMN06218085	GCA_002181225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/225/GCA_002181225.1_ASM218122v1	-	44809
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.81041	56.9	-	NDDM01	181	5990	5710	6/8/17	6/10/17	Contig	JCVI	SAMN06218083	GCA_002181245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/245/GCA_002181245.1_ASM218124v1	-	44811
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.87867	38.9	-	LZAD01	114	3751	3602	6/17/16	3/20/17	Contig	JCVI	SAMN04993351	GCA_001665125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/125/GCA_001665125.1_ASM166512v1	-	CCF10
Pseudomonas aeruginosa	287	PRJNA393931	393931	Proteobacteria	Gammaproteobacteria	7.00589	66	-	NMPV01	934	6714	6339	8/22/17	8/24/17	Contig	"Faculte de Medecine, Universite Paris-Sud"	SAMN07344898	GCA_002263445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/445/GCA_002263445.1_ASM226344v1	-	53011
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00626	39.7	-	CNVG02	119	2215	2010	3/22/15	3/11/17	Contig	SC	SAMEA1032472	GCA_001150425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/425/GCA_001150425.2_6999_7_12	-	369820
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.99194	50.6	-	JSJA01	88	5188	4827	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802093	GCA_000777815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/815/GCA_000777815.1_ASM77781v1	25373147	upec-266
Mycobacterium tuberculosis KT-0085	1400926	PRJNA219809	219809	Terrabacteria group	Actinobacteria	4.40957	65.5	-	JLQY01	9	4282	4094	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360604	GCA_000674295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/295/GCA_000674295.1_Myco_tube_KT-0085_V1	-	KT-0085
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.95305	37.9	-	MJRH01	12	3006	2939	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358303	GCA_001827725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/725/GCA_001827725.1_ASM182772v1	-	BCW_4764
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.87713	52	-	CJGI01	55	5064	4702	3/21/15	2/27/17	Contig	SC	SAMEA2149532	GCA_001097525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/525/GCA_001097525.1_10562_2_1	-	MDUST110
Staphylococcus aureus M0065	1388032	PRJNA216201	216201	Terrabacteria group	Firmicutes	2.8981	32.9	-	JBWV01	32	3056	2889	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325156	GCA_000551665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/665/GCA_000551665.1_Stap_aure_M0065_V1	-	M0065
Staphylococcus aureus M0069	1388035	PRJNA216204	216204	Terrabacteria group	Firmicutes	2.93555	32.9	-	JBWW01	29	3107	2933	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325159	GCA_000551685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/685/GCA_000551685.1_Stap_aure_M0069_V1	-	M0069
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.97228	51.7	-	CJJA01	49	5182	4790	3/21/15	2/27/17	Contig	SC	SAMEA1929441	GCA_001097825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/825/GCA_001097825.1_10592_2_30	-	2513
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.88258	37.9	-	MJRI01	12	2930	2842	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358304	GCA_001827745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/745/GCA_001827745.1_ASM182774v1	-	BCW_4765
Mycobacterium tuberculosis KT-0089	1400927	PRJNA219810	219810	Terrabacteria group	Actinobacteria	4.41936	65.6	-	JLQX01	6	4298	4107	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360605	GCA_000674315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/315/GCA_000674315.1_Myco_tube_KT-0089_V1	-	KT-0089
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.02216	50.4	-	JSJB01	573	5583	4629	11/13/14	3/9/17	Scaffold	University of Washington	SAMN02802092	GCA_000777835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/835/GCA_000777835.1_ASM77783v1	25373147	upec-265
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10805	39.6	-	CKSM01	61	2316	2092	3/21/15	3/10/17	Contig	SC	SAMEA1025640	GCA_001150505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/505/GCA_001150505.1_6807_3_6	-	SMRU1614
Pseudomonas aeruginosa	287	PRJNA393931	393931	Proteobacteria	Gammaproteobacteria	7.10014	66	-	NMPW01	586	6921	6572	8/22/17	8/24/17	Contig	"Faculte de Medecine, Universite Paris-Sud"	SAMN07344897	GCA_002263455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/455/GCA_002263455.1_ASM226345v1	-	41437
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.9405	38.9	-	LZAE01	54	3800	3656	6/17/16	3/20/17	Contig	JCVI	SAMN04993353	GCA_001665145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/145/GCA_001665145.1_ASM166514v1	-	CCF11
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.38869	57.4	-	NDDL01	104	5486	5249	6/8/17	6/10/17	Contig	JCVI	SAMN06218084	GCA_002181265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/265/GCA_002181265.1_ASM218126v1	-	44810
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.80656	56.9	-	NDDO01	174	5995	5709	6/8/17	6/10/17	Contig	JCVI	SAMN06218081	GCA_002181275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/275/GCA_002181275.1_ASM218127v1	-	44813
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.8659	38.9	-	LZAH01	120	3738	3588	6/17/16	3/20/17	Contig	JCVI	SAMN04993359	GCA_001665155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/155/GCA_001665155.1_ASM166515v1	-	CCF14
Pseudomonas aeruginosa	287	PRJNA393969	393969	Proteobacteria	Gammaproteobacteria	6.69811	66.2	-	NMQQ01	71	6439	6224	8/22/17	8/24/17	Contig	Hospital de Clinicas de Porto Alegre	SAMN07346094	GCA_002263535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/535/GCA_002263535.1_ASM226353v1	-	PAN3
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.14715	39.6	-	CKWB01	59	2377	2151	3/21/15	3/10/17	Contig	SC	SAMEA1026010	GCA_001150585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/585/GCA_001150585.1_6823_5_20	-	SMRU1964
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.34101	50.4	-	JSJF01	133	5513	5104	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802088	GCA_000777845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/845/GCA_000777845.1_ASM77784v1	25373147	upec-261
Mycobacterium tuberculosis KT-0091	1400928	PRJNA219811	219811	Terrabacteria group	Actinobacteria	4.40691	65.5	-	JLQW01	10	4285	4100	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360606	GCA_000674335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/335/GCA_000674335.1_Myco_tube_KT-0091_V1	-	KT-0091
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.90648	38	-	MJRJ01	25	2925	2832	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358305	GCA_001827775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/775/GCA_001827775.1_ASM182777v1	-	BCW_4766
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93226	51.8	-	CJVN01	65	5124	4747	3/21/15	2/27/17	Contig	SC	SAMEA2055650	GCA_001098065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/065/GCA_001098065.1_9870_8_57	-	2011-007792
Staphylococcus aureus M0070	1388036	PRJNA216205	216205	Terrabacteria group	Firmicutes	2.93011	32.9	-	JBWX01	71	3123	2955	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325160	GCA_000551705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/705/GCA_000551705.1_Stap_aure_M0070_V1	-	M0070
Staphylococcus aureus M0071	1388037	PRJNA216206	216206	Terrabacteria group	Firmicutes	2.84291	32.9	-	JBWY01	51	3002	2817	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325161	GCA_000551725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/725/GCA_000551725.1_Stap_aure_M0071_V1	-	M0071
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93865	51.8	-	CJUY01	54	5127	4753	3/21/15	2/27/17	Contig	SC	SAMEA1970528	GCA_001098685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/685/GCA_001098685.1_9870_8_32	-	2010-008154
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.97258	37.9	-	MJRK01	16	3003	2917	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358306	GCA_001827795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/795/GCA_001827795.1_ASM182779v1	-	BCW_4767
Mycobacterium tuberculosis KT-0092	1400929	PRJNA219812	219812	Terrabacteria group	Actinobacteria	4.3881	65.6	-	JLQV01	5	4273	4100	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360607	GCA_000674355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/355/GCA_000674355.1_Myco_tube_KT-0092_V1	-	KT-0092
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.23529	50.4	-	JSJG01	127	5389	4974	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802087	GCA_000777895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/895/GCA_000777895.1_ASM77789v1	25373147	upec-260
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.06456	39.5	-	CLBS01	52	2263	2046	3/21/15	3/10/17	Contig	SC	SAMEA1025879	GCA_001150625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/625/GCA_001150625.1_6871_1_6	-	SMRU1782
Pseudomonas aeruginosa	287	PRJNA394047	394047	Proteobacteria	Gammaproteobacteria	7.00871	65.9	-	NMRU01	3	6765	6519	8/22/17	8/24/17	Contig	"Atmosphere and Ocean Research Institute, The University of Tokyo"	SAMN07347484	GCA_002263545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/545/GCA_002263545.1_ASM226354v1	-	Ocean-1170
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.97188	39	-	LZAI01	186	3939	3696	6/17/16	3/20/17	Contig	JCVI	SAMN04993360	GCA_001665175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/175/GCA_001665175.1_ASM166517v1	-	CCF15
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.65692	57.1	-	NDDP01	121	5824	5577	6/8/17	6/10/17	Contig	JCVI	SAMN06218080	GCA_002181305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/305/GCA_002181305.1_ASM218130v1	-	44814
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.80567	56.9	-	NDDQ01	174	5984	5699	6/8/17	6/10/17	Contig	JCVI	SAMN06218079	GCA_002181325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/325/GCA_002181325.1_ASM218132v1	-	44815
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.84788	38.9	-	LZAM01	94	3711	3562	6/17/16	3/20/17	Contig	JCVI	SAMN04993368	GCA_001665205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/205/GCA_001665205.1_ASM166520v1	-	CCF19
Pseudomonas aeruginosa	287	PRJNA394047	394047	Proteobacteria	Gammaproteobacteria	6.81197	66.2	-	NMRT01	3	6508	6257	8/22/17	8/24/17	Contig	"Atmosphere and Ocean Research Institute, The University of Tokyo"	SAMN07347486	GCA_002263685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/685/GCA_002263685.1_ASM226368v1	-	Ocean-238
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.20128	39.4	-	CPLL01	105	2384	2139	3/22/15	3/11/17	Contig	SC	SAMEA1020637	GCA_001150665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/665/GCA_001150665.1_6187_6_23	-	LMG2230
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.17739	50.7	-	JSJI01	75	5345	5023	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802085	GCA_000777945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/945/GCA_000777945.1_ASM77794v1	25373147	upec-259
Mycobacterium tuberculosis KT-0094	1400930	PRJNA219813	219813	Terrabacteria group	Actinobacteria	4.47011	65.5	-	JLQU01	8	4348	4147	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360608	GCA_000674375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/375/GCA_000674375.1_Myco_tube_KT-0094_V1	-	KT-0094
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.93754	37.9	-	MJRM01	21	2949	2859	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358308	GCA_001827805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/805/GCA_001827805.1_ASM182780v1	-	BCW_4769
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93198	51.8	-	CIVY01	59	5129	4743	3/21/15	2/27/17	Contig	SC	SAMEA1973129	GCA_001099265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/265/GCA_001099265.1_10209_5_53	-	UI315
Staphylococcus aureus M0074	1388039	PRJNA216208	216208	Terrabacteria group	Firmicutes	2.85963	32.9	-	JBWZ01	45	3016	2849	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325163	GCA_000551745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/745/GCA_000551745.1_Stap_aure_M0074_V1	-	M0074
Staphylococcus aureus M0076	1388040	PRJNA216209	216209	Terrabacteria group	Firmicutes	2.87957	32.8	-	JBXA01	14	3024	2858	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325164	GCA_000551765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/765/GCA_000551765.1_Stap_aure_M0076_V1	-	M0076
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70087	52.1	-	CJTC01	47	4854	4503	3/21/15	2/27/17	Contig	SC	SAMEA1903872	GCA_001099285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/285/GCA_001099285.1_9475_6_48	-	A53009
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.98604	37.9	-	MJRL01	19	3048	2971	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358307	GCA_001827815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/815/GCA_001827815.1_ASM182781v1	-	BCW_4768
Mycobacterium tuberculosis KT-0096	1400931	PRJNA219814	219814	Terrabacteria group	Actinobacteria	4.39697	65.5	-	JLQT01	10	4285	4107	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360609	GCA_000674395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/395/GCA_000674395.1_Myco_tube_KT-0096_V1	-	KT-0096
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.32691	50.4	-	JSJJ01	153	5568	5157	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802084	GCA_000777975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/975/GCA_000777975.1_ASM77797v1	25373147	upec-258
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.17527	39.7	-	CLPV01	48	2390	2167	3/21/15	3/10/17	Contig	SC	SAMEA1028946	GCA_001150705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/705/GCA_001150705.1_6949_4_10	-	SMRU2482
Pseudomonas aeruginosa	287	PRJNA325248	325248	Proteobacteria	Gammaproteobacteria	6.2724	66.6	-	MCMN01	44	5948	5750	8/29/17	8/30/17	Contig	International Pseudomonas aeruginosa Consortium	SAMN05226616	GCA_002276485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/485/GCA_002276485.1_ASM227648v1	-	2D9A
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.94273	38.8	-	LZAR01	131	3842	3674	6/17/16	3/20/17	Contig	JCVI	SAMN04993378	GCA_001665215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/215/GCA_001665215.1_ASM166521v1	-	CCF24
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.85462	57	-	NDDR01	104	5989	5740	6/8/17	6/10/17	Contig	JCVI	SAMN06218034	GCA_002181345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/345/GCA_002181345.1_ASM218134v1	-	44816
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.54885	57.2	-	NDDS01	124	5649	5408	6/8/17	6/10/17	Contig	JCVI	SAMN06218033	GCA_002181355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/355/GCA_002181355.1_ASM218135v1	-	44817
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.83729	38.9	-	LZEV01	117	3712	3559	6/17/16	3/20/17	Contig	JCVI	SAMN04993420	GCA_001665285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/285/GCA_001665285.1_ASM166528v1	-	CCF40
Pseudomonas aeruginosa	287	PRJNA398578	398578	Proteobacteria	Gammaproteobacteria	6.70002	66.2	-	NQWG01	83	6430	6192	8/31/17	9/2/17	Contig	Hospital de Clinicas de Porto Alegre	SAMN07513432	GCA_002283295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/295/GCA_002283295.1_ASM228329v1	-	PAH13
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.99945	39.7	-	CNXD02	109	2163	1970	3/23/15	3/5/17	Contig	SC	SAMEA1032409	GCA_001150885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/885/GCA_001150885.2_7001_3_12	-	R34-3147
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.33327	50.8	-	JSJL01	129	5582	5242	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802082	GCA_000777995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/995/GCA_000777995.1_ASM77799v1	25373147	upec-256
Mycobacterium tuberculosis KT-0098	1400932	PRJNA219815	219815	Terrabacteria group	Actinobacteria	4.39956	65.6	-	JLQS01	12	4282	4102	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360610	GCA_000674415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/415/GCA_000674415.1_Myco_tube_KT-0098_V1	-	KT-0098
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.93271	37.9	-	MJRN01	21	2930	2858	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358309	GCA_001827855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/855/GCA_001827855.1_ASM182785v1	-	BCW_4770
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.7374	52.1	-	CJOF01	51	4901	4558	3/21/15	2/27/17	Contig	SC	SAMEA1406355	GCA_001099765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/765/GCA_001099765.1_7468_7_78	-	IB5367
Staphylococcus aureus M0079	1388041	PRJNA216210	216210	Terrabacteria group	Firmicutes	2.87579	32.9	-	JBXB01	12	3020	2857	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325165	GCA_000551785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/785/GCA_000551785.1_Stap_aure_M0079_V1	-	M0079
Staphylococcus aureus M0080	1388042	PRJNA216211	216211	Terrabacteria group	Firmicutes	2.92486	32.7	-	JBXC01	65	3137	2963	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325166	GCA_000551805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/805/GCA_000551805.1_Stap_aure_M0080_V1	-	M0080
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69918	52.1	-	CJYU01	43	4864	4503	3/21/15	2/27/17	Contig	SC	SAMEA2056536	GCA_001099925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/925/GCA_001099925.1_9953_5_78	-	LNT1542
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.93113	37.9	-	MJRO01	25	2928	2852	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358310	GCA_001827875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/875/GCA_001827875.1_ASM182787v1	-	BCW_4771
Mycobacterium tuberculosis KT-0099	1400933	PRJNA219816	219816	Terrabacteria group	Actinobacteria	4.40795	65.5	-	JLQR01	8	4277	4090	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360611	GCA_000674435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/435/GCA_000674435.1_Myco_tube_KT-0099_V1	-	KT-0099
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.09604	50.6	-	JSJK01	77	5318	4971	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802083	GCA_000778015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/015/GCA_000778015.1_ASM77801v1	25373147	upec-257
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.04116	39.6	-	CLAX01	52	2239	1995	3/21/15	3/14/17	Contig	SC	SAMEA1025641	GCA_001150945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/945/GCA_001150945.1_6841_7_23	-	SMRU1343
Pseudomonas aeruginosa	287	PRJNA398580	398580	Proteobacteria	Gammaproteobacteria	6.81975	66	-	NQWF01	146	6651	6316	8/31/17	9/2/17	Contig	Hospital de Clinicas de Porto Alegre	SAMN07513433	GCA_002283315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/315/GCA_002283315.1_ASM228331v1	-	PA404
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.88098	38.9	-	LZAU01	120	3757	3601	6/17/16	3/20/17	Contig	JCVI	SAMN04993382	GCA_001665985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/665/985/GCA_001665985.1_ASM166598v1	-	CCF28
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.47047	57.1	-	NDDT01	62	5432	5213	6/8/17	6/10/17	Contig	JCVI	SAMN06218032	GCA_002181385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/385/GCA_002181385.1_ASM218138v1	-	44818
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.70718	56.8	-	NDDU01	132	5865	5613	6/8/17	6/10/17	Contig	JCVI	SAMN06218031	GCA_002181405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/405/GCA_002181405.1_ASM218140v1	-	44819
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.87796	38.9	-	LZAV01	119	3752	3603	6/17/16	3/20/17	Contig	JCVI	SAMN04993384	GCA_001666065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/065/GCA_001666065.1_ASM166606v1	-	CCF29
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.52189	66.4	-	NQZU01	92	6215	6014	9/4/17	9/6/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504845	GCA_002285195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/195/GCA_002285195.1_ASM228519v1	-	P27b
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.03387	39.7	-	CPUM01	191	2232	2026	3/23/15	3/11/17	Contig	SC	SAMEA1020142	GCA_001150965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/965/GCA_001150965.1_6237_8_21	-	S-186
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.18344	50.6	-	JSJM01	77	5424	5096	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802081	GCA_000778035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/035/GCA_000778035.1_ASM77803v1	25373147	upec-255
Mycobacterium tuberculosis KT-0100	1400934	PRJNA219817	219817	Terrabacteria group	Actinobacteria	4.43495	65.4	-	JLQQ01	10	4318	4104	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360612	GCA_000674455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/455/GCA_000674455.1_Myco_tube_KT-0100_V1	-	KT-0100
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.97844	37.9	-	MJRP01	18	3031	2944	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358311	GCA_001827885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/885/GCA_001827885.1_ASM182788v1	-	BCW_4772
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93392	51.8	-	CJVB01	73	5127	4748	3/21/15	2/27/17	Contig	SC	SAMEA2058422	GCA_001099985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/985/GCA_001099985.1_9870_8_40	-	2010-011712
Staphylococcus aureus M0081	1388043	PRJNA216212	216212	Terrabacteria group	Firmicutes	2.93553	32.9	-	JBXD01	33	3110	2934	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325167	GCA_000551825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/825/GCA_000551825.1_Stap_aure_M0081_V1	-	M0081
Staphylococcus aureus M0082	1388044	PRJNA216213	216213	Terrabacteria group	Firmicutes	2.97795	33	-	JBXE01	98	3209	3000	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325168	GCA_000551845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/845/GCA_000551845.1_Stap_aure_M0082_V1	-	M0082
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.92946	51.8	-	CJLR01	58	5116	4748	3/21/15	2/27/17	Contig	SC	SAMEA2149711	GCA_001100065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/065/GCA_001100065.1_10607_1_52	-	2010-012339
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.89022	37.9	-	MJRQ01	18	2908	2832	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358312	GCA_001827905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/905/GCA_001827905.1_ASM182790v1	-	BCW_4773
Mycobacterium tuberculosis KT-0102	1400935	PRJNA219818	219818	Terrabacteria group	Actinobacteria	4.39425	65.5	-	JLQP01	17	4290	4092	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360613	GCA_000674475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/475/GCA_000674475.1_Myco_tube_KT-0102_V1	-	KT-0102
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.29052	50.6	-	JSJN01	168	5594	5262	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802080	GCA_000778055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/055/GCA_000778055.1_ASM77805v1	25373147	upec-254
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.10234	39.7	-	CMUK01	78	2259	1968	3/22/15	3/10/17	Contig	SC	SAMEA1022868	GCA_001151025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/025/GCA_001151025.1_5737_6_6	-	146
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.41393	66.5	-	NRFL01	78	6091	5942	9/4/17	9/6/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504874	GCA_002285345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/345/GCA_002285345.1_ASM228534v1	-	SJU-R10_2
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.91151	38.8	-	LZAW01	125	3806	3650	6/17/16	3/20/17	Contig	JCVI	SAMN04993385	GCA_001666075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/075/GCA_001666075.1_ASM166607v1	-	CCF30
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.59421	57.2	-	NDDV01	120	5720	5483	6/8/17	6/10/17	Contig	JCVI	SAMN06218030	GCA_002181415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/415/GCA_002181415.1_ASM218141v1	-	44820
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.38158	57.3	-	NDDZ01	82	5411	5172	6/8/17	6/10/17	Contig	JCVI	SAMN06218126	GCA_002181445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/445/GCA_002181445.1_ASM218144v1	-	44824
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.86729	38.9	-	LZAX01	122	3751	3598	6/17/16	3/20/17	Contig	JCVI	SAMN04993386	GCA_001666085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/085/GCA_001666085.1_ASM166608v1	-	CCF31
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.22245	66.5	-	NRFH01	74	5886	5738	9/4/17	9/6/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504878	GCA_002285355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/355/GCA_002285355.1_ASM228535v1	-	SJU-S6_3
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05793	39.6	-	CNWY02	163	2221	2013	3/23/15	3/5/17	Contig	SC	SAMEA1032743	GCA_001151065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/065/GCA_001151065.2_7001_2_7	-	R34-3111
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.10674	50.5	-	JSJO01	125	5264	4870	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802079	GCA_000778075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/075/GCA_000778075.1_ASM77807v1	25373147	upec-253
Mycobacterium tuberculosis KT-0104	1400936	PRJNA219819	219819	Terrabacteria group	Actinobacteria	4.43512	65.4	-	JLQO01	14	4302	4110	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360614	GCA_000674495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/495/GCA_000674495.1_Myco_tube_KT-0104_V1	-	KT-0104
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.93987	37.9	-	MJRR01	32	2988	2914	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358313	GCA_001827935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/935/GCA_001827935.1_ASM182793v1	-	BCW_4774
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72491	52	-	CJXE01	49	4882	4529	3/21/15	2/27/17	Contig	SC	SAMEA2057247	GCA_001100225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/225/GCA_001100225.1_9953_5_26	-	A344-1st
Staphylococcus aureus M0083	1388045	PRJNA216214	216214	Terrabacteria group	Firmicutes	2.93079	32.9	-	JBXF01	69	3140	2956	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325169	GCA_000551865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/865/GCA_000551865.1_Stap_aure_M0083_V1	-	M0083
Staphylococcus aureus M0084	1388046	PRJNA216215	216215	Terrabacteria group	Firmicutes	2.87799	32.9	-	JBXG01	17	3023	2856	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325170	GCA_000551885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/885/GCA_000551885.1_Stap_aure_M0084_V1	-	M0084
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.87196	51.9	-	CJDB01	54	5055	4686	3/21/15	2/27/17	Contig	SC	SAMEA2146511	GCA_001100465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/465/GCA_001100465.1_10540_1_5	-	3306/3
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.93651	38	-	MJRS01	17	2948	2860	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358314	GCA_001827955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/955/GCA_001827955.1_ASM182795v1	-	BCW_4775
Mycobacterium tuberculosis KT-0106	1400937	PRJNA219820	219820	Terrabacteria group	Actinobacteria	4.40591	65.5	-	JLQN01	6	4283	4094	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360615	GCA_000674515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/515/GCA_000674515.1_Myco_tube_KT-0106_V1	-	KT-0106
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.2833	50.5	-	JSJP01	102	5451	5081	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802077	GCA_000778095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/095/GCA_000778095.1_ASM77809v1	25373147	upec-251
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00095	39.7	-	CODM02	124	2147	1957	3/23/15	3/11/17	Contig	SC	SAMEA1463176	GCA_001151165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/165/GCA_001151165.2_7622_4_23	-	LE4062
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.50976	66.3	-	NRET01	105	6203	6032	9/4/17	9/6/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504892	GCA_002285375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/375/GCA_002285375.1_ASM228537v1	-	SJU-W20_2
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.88319	38.9	-	LZAZ01	128	3763	3609	6/17/16	3/20/17	Contig	JCVI	SAMN04993424	GCA_001666105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/105/GCA_001666105.1_ASM166610v1	-	CCF43
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.50685	57.2	-	NDEA01	104	5641	5385	6/8/17	6/10/17	Contig	JCVI	SAMN06218061	GCA_002181455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/455/GCA_002181455.1_ASM218145v1	-	41964
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.37984	57.4	-	NDEB01	88	5484	5272	6/8/17	6/10/17	Contig	JCVI	SAMN06218060	GCA_002181485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/485/GCA_002181485.1_ASM218148v1	-	41965
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.86057	38.9	-	LZBA01	115	3738	3590	6/17/16	3/20/17	Contig	JCVI	SAMN04993426	GCA_001666145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/145/GCA_001666145.1_ASM166614v1	-	CCF44
Pseudomonas aeruginosa	287	PRJNA398582	398582	Proteobacteria	Gammaproteobacteria	6.74927	66.1	-	NQWE01	170	6648	6227	9/6/17	9/8/17	Contig	Hospital de Clinicas de Porto Alegre	SAMN07513434	GCA_002287415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/415/GCA_002287415.1_ASM228741v1	-	PA327
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.14885	39.7	-	CMVU01	95	2320	2025	3/23/15	3/15/17	Contig	SC	SAMEA1970012	GCA_001151285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/285/GCA_001151285.1_5756_5_9	-	273
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.20808	50.7	-	JSJQ01	101	5428	5075	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802076	GCA_000778105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/105/GCA_000778105.1_ASM77810v1	25373147	upec-250
Mycobacterium tuberculosis KT-0108	1400939	PRJNA219822	219822	Terrabacteria group	Actinobacteria	4.40253	65.5	-	JLQL01	6	4291	4095	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360617	GCA_000674535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/535/GCA_000674535.1_Myco_tube_KT-0108_V1	-	KT-0108
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.87986	37.9	-	MJRT01	9	2931	2840	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358315	GCA_001827975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/975/GCA_001827975.1_ASM182797v1	-	BCW_4776
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.73723	52.1	-	CJOI01	49	4910	4556	3/21/15	2/27/17	Contig	SC	SAMEA1406341	GCA_001101365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/365/GCA_001101365.1_7468_7_85	-	IB5374
Staphylococcus aureus M0086	1388048	PRJNA216217	216217	Terrabacteria group	Firmicutes	2.96283	32.8	-	JBXH01	57	3128	2942	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325172	GCA_000551905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/905/GCA_000551905.1_Stap_aure_M0086_V1	-	M0086
Staphylococcus aureus M0087	1388049	PRJNA216218	216218	Terrabacteria group	Firmicutes	2.95745	32.9	-	JBXI01	70	3150	2953	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325173	GCA_000551925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/925/GCA_000551925.1_Stap_aure_M0087_V1	-	M0087
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81236	52.1	-	CJSV01	47	5012	4656	3/21/15	2/27/17	Contig	SC	SAMEA1903867	GCA_001101585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/585/GCA_001101585.1_9475_6_43	-	1020184
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.00512	37.8	-	MJRU01	19	3087	2989	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358316	GCA_001827995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/827/995/GCA_001827995.1_ASM182799v1	-	BCW_4777
Mycobacterium tuberculosis KT-0109	1400940	PRJNA219823	219823	Terrabacteria group	Actinobacteria	4.39333	65.6	-	JLQK01	5	4283	4087	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360618	GCA_000674555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/555/GCA_000674555.1_Myco_tube_KT-0109_V1	-	KT-0109
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.10613	50.6	-	JSJS01	102	5305	4963	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802074	GCA_000778135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/135/GCA_000778135.1_ASM77813v1	25373147	upec-249
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.06111	39.6	-	CLLJ01	67	2247	2034	3/21/15	3/4/17	Contig	SC	SAMEA1028974	GCA_001151305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/305/GCA_001151305.1_6938_6_1	-	SMRU2665
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.8801	66	-	MWXT01	83	6597	6317	9/8/17	9/11/17	Contig	Universite Laval	SAMN06547042	GCA_002287725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/725/GCA_002287725.1_ASM228772v1	-	PPF-1
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.804	39	-	LZBB01	113	3650	3502	6/17/16	3/20/17	Contig	JCVI	SAMN04993427	GCA_001666155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/155/GCA_001666155.1_ASM166615v1	-	CCF45
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.59636	57.2	-	NDEC01	132	5758	5507	6/8/17	6/10/17	Contig	JCVI	SAMN06218059	GCA_002181505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/505/GCA_002181505.1_ASM218150v1	-	41966
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.69598	57	-	NDBH01	146	5875	5626	6/8/17	6/10/17	Contig	JCVI	SAMN06218065	GCA_002181525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/525/GCA_002181525.1_ASM218152v1	-	41950
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	4.00207	39	-	LZBD01	120	3895	3741	6/17/16	3/20/17	Contig	JCVI	SAMN04993430	GCA_001666175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/175/GCA_001666175.1_ASM166617v1	-	CCF48
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.5941	66.1	-	MWXG01	52	6229	6022	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547055	GCA_002312055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/055/GCA_002312055.1_ASM231205v1	-	173
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.03561	39.6	-	CLUG01	82	2235	2008	3/21/15	3/4/17	Contig	SC	SAMEA1025880	GCA_001151345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/345/GCA_001151345.1_6983_2_12	-	SMRU2220
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.94688	50.8	-	JSJT01	119	5271	4878	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802073	GCA_000778175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/175/GCA_000778175.1_ASM77817v1	25373147	upec-248
Mycobacterium tuberculosis KT-0110	1400941	PRJNA219824	219824	Terrabacteria group	Actinobacteria	4.42083	65.5	-	JLQJ01	30	4290	4098	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360619	GCA_000674575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/575/GCA_000674575.1_Myco_tube_KT-0110_V1	-	KT-0110
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.95195	37.9	-	MJRV01	14	2998	2937	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358317	GCA_001828005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/005/GCA_001828005.1_ASM182800v1	-	BCW_4778
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93247	51.8	-	CJVR01	57	5134	4755	3/21/15	2/27/17	Contig	SC	SAMEA2056658	GCA_001102245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/245/GCA_001102245.1_9870_8_62	-	BC2011-1311
Staphylococcus aureus M0089	1388050	PRJNA216219	216219	Terrabacteria group	Firmicutes	2.83712	32.8	-	JBXJ01	8	2955	2799	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325174	GCA_000551945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/945/GCA_000551945.1_Stap_aure_M0089_V1	-	M0089
Staphylococcus aureus M0092	1388051	PRJNA216220	216220	Terrabacteria group	Firmicutes	2.80064	32.8	-	JBXK01	12	2899	2728	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325175	GCA_000551965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/965/GCA_000551965.1_Stap_aure_M0092_V1	-	M0092
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93152	51.8	-	CJNT01	56	5139	4759	3/21/15	2/27/17	Contig	SC	SAMEA2157136	GCA_001102325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/325/GCA_001102325.1_10608_2_65	-	2012-019308
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.9349	38	-	MJRW01	15	2982	2891	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358319	GCA_001828035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/035/GCA_001828035.1_ASM182803v1	-	BCW_4780
Mycobacterium tuberculosis SK-E	1402473	PRJNA219831	219831	Terrabacteria group	Actinobacteria	4.36799	65.6	-	JLST01	62	4298	4094	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360620	GCA_000674595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/595/GCA_000674595.1_Myco_tube_SK-E_V1	-	SK-E
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.94325	50.5	-	JSJW01	75	5030	4706	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802069	GCA_000778215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/215/GCA_000778215.1_ASM77821v1	25373147	upec-244
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11002	39.6	-	CLGA01	36	2293	2036	3/21/15	3/15/17	Contig	SC	SAMEA1025823	GCA_001151365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/365/GCA_001151365.1_6925_3_2	-	SMRU2114
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.70475	66.3	-	MWXK01	28	6396	6216	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547051	GCA_002312065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/065/GCA_002312065.1_ASM231206v1	-	462
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	4.20528	39	-	LZBE01	100	4144	3982	6/17/16	3/20/17	Contig	JCVI	SAMN04993432	GCA_001666195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/195/GCA_001666195.1_ASM166619v1	-	CCF49
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.7119	57.1	-	NDBI01	121	5821	5575	6/8/17	6/10/17	Contig	JCVI	SAMN06218063	GCA_002181545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/545/GCA_002181545.1_ASM218154v1	-	41959
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.44072	57.3	-	NDBJ01	92	5537	5318	6/8/17	6/10/17	Contig	JCVI	SAMN06218062	GCA_002181555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/555/GCA_002181555.1_ASM218155v1	-	41963
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.78572	38.9	-	LZBF01	64	3617	3444	6/17/16	3/20/17	Contig	JCVI	SAMN04993434	GCA_001666225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/225/GCA_001666225.1_ASM166622v1	-	CCF50
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.75341	66.2	-	MWXH01	34	6450	6275	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547054	GCA_002312095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/095/GCA_002312095.1_ASM231209v1	-	712
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.0922	39.8	-	CKSG01	51	2293	2081	3/21/15	3/4/17	Contig	SC	SAMEA1023753	GCA_001151405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/405/GCA_001151405.1_6680_8_7	-	SMRU199
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.02699	50.4	-	JSJX01	79	5192	4831	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802068	GCA_000778235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/235/GCA_000778235.1_ASM77823v1	25373147	upec-243
Mycobacterium tuberculosis SK-C	1402475	PRJNA219833	219833	Terrabacteria group	Actinobacteria	4.38649	65.6	-	JLSS01	10	4277	4090	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02360622	GCA_000674615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/615/GCA_000674615.1_Myco_tube_SK-C_V1	-	SK-C
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.02696	37.8	-	MJRX01	19	3101	3000	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358320	GCA_001828055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/055/GCA_001828055.1_ASM182805v1	-	BCW_4781
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74599	52.1	-	CJTD01	48	4918	4553	3/21/15	2/27/17	Contig	SC	SAMEA1903830	GCA_001102545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/545/GCA_001102545.1_9475_6_5	-	1021678
Staphylococcus aureus M0093	1388052	PRJNA216221	216221	Terrabacteria group	Firmicutes	2.86494	32.9	-	JBXL01	26	2994	2829	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325176	GCA_000551985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/551/985/GCA_000551985.1_Stap_aure_M0093_V1	-	M0093
Staphylococcus aureus M0094	1388053	PRJNA216222	216222	Terrabacteria group	Firmicutes	2.87701	32.9	-	JBXM01	15	3021	2853	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325177	GCA_000552005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/005/GCA_000552005.1_Stap_aure_M0094_V1	-	M0094
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.97725	52.1	-	CQGO01	49	5157	4886	3/22/15	2/27/17	Contig	SC	SAMEA1568471	GCA_001102665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/665/GCA_001102665.1_8490_2_49	-	CH6
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.94114	37.9	-	MJRY01	16	2986	2912	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358321	GCA_001828065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/065/GCA_001828065.1_ASM182806v1	-	BCW_4782
Mycobacterium tuberculosis UG-C	1402480	PRJNA219838	219838	Terrabacteria group	Actinobacteria	4.3921	65.6	-	JLSQ01	6	4285	4110	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02360627	GCA_000674635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/635/GCA_000674635.1_Myco_tube_UG-C_V1	-	UG-C
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.65132	50.5	-	JSKA01	61	4662	4410	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802063	GCA_000778275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/275/GCA_000778275.1_ASM77827v1	25373147	upec-239
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.05609	39.7	-	CQWV01	125	2231	2046	3/22/15	3/4/17	Contig	SC	SAMEA1024822	GCA_001151485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/485/GCA_001151485.1_6714_7_23	-	SMRU767
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.39866	66.4	-	MWXL01	34	6075	5912	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547050	GCA_002312115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/115/GCA_002312115.1_ASM231211v1	-	282
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.85727	38.9	-	LZBG01	122	3734	3588	6/17/16	3/20/17	Contig	JCVI	SAMN04993435	GCA_001666235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/235/GCA_001666235.1_ASM166623v1	-	CCF51
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.88216	57	-	NDBR01	188	6078	5769	6/8/17	6/10/17	Contig	JCVI	SAMN06218046	GCA_002181585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/585/GCA_002181585.1_ASM218158v1	-	39883
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.7406	57.1	-	NDBS01	159	5892	5615	6/8/17	6/10/17	Contig	JCVI	SAMN06218044	GCA_002181595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/595/GCA_002181595.1_ASM218159v1	-	39885
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.86885	38.9	-	LZBJ01	117	3741	3590	6/17/16	3/20/17	Contig	JCVI	SAMN04993440	GCA_001666255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/255/GCA_001666255.1_ASM166625v1	-	CCF54
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.66634	66.3	-	MWXN01	54	6470	6263	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547048	GCA_002312135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/135/GCA_002312135.1_ASM231213v1	-	Site 7
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.06447	39.6	-	CROF01	73	2288	2046	3/23/15	3/4/17	Contig	SC	SAMEA1025595	GCA_001151545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/545/GCA_001151545.1_6755_5_19	-	SMRU1171
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.62682	51	-	JSJZ01	188	4793	4366	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802064	GCA_000778285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/285/GCA_000778285.1_ASM77828v1	25373147	upec-24
Mycobacterium tuberculosis UG-D	1402483	PRJNA219841	219841	Terrabacteria group	Actinobacteria	4.43623	65.5	-	JLSP01	6	4313	4101	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02360630	GCA_000674655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/655/GCA_000674655.1_Myco_tube_UG-D_V1	-	UG-D
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.9389	37.9	-	MJRZ01	19	2989	2913	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358322	GCA_001828095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/095/GCA_001828095.1_ASM182809v1	-	BCW_4783
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93426	51.8	-	CJVG01	64	5140	4755	3/21/15	2/27/17	Contig	SC	SAMEA2056653	GCA_001102845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/845/GCA_001102845.1_9870_8_47	-	2010-004004
Staphylococcus aureus M0095	1388054	PRJNA216223	216223	Terrabacteria group	Firmicutes	2.8762	32.9	-	JBXN01	14	3016	2854	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325178	GCA_000552025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/025/GCA_000552025.1_Stap_aure_M0095_V1	-	M0095
Staphylococcus aureus M0096	1388055	PRJNA216224	216224	Terrabacteria group	Firmicutes	2.87604	32.8	-	JBXO01	14	3017	2853	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325179	GCA_000552045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/045/GCA_000552045.1_Stap_aure_M0096_V1	-	M0096
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93315	51.8	-	CJVY01	54	5125	4752	3/21/15	2/27/17	Contig	SC	SAMEA2055775	GCA_001103265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/265/GCA_001103265.1_9870_8_72	-	2012-002759
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.9544	37.8	-	MJSA01	14	3011	2914	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358323	GCA_001828115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/115/GCA_001828115.1_ASM182811v1	-	BCW_4784
Mycobacterium tuberculosis UT0001	1408904	PRJNA223536	223536	Terrabacteria group	Actinobacteria	4.40421	65.6	-	JLQI01	7	4291	4091	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02380981	GCA_000674675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/675/GCA_000674675.1_Myco_tube_UT0001_V1	-	UT0001
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.73759	50.8	-	JSKB01	72	4819	4603	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802062	GCA_000778315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/315/GCA_000778315.1_ASM77831v1	25373147	upec-238
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08491	39.7	-	CROH01	55	2300	2097	3/23/15	3/4/17	Contig	SC	SAMEA1025622	GCA_001151645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/645/GCA_001151645.1_6755_5_20	-	SMRU1172
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.66822	66.3	-	MWXO01	41	6459	6276	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547047	GCA_002312145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/145/GCA_002312145.1_ASM231214v1	-	151 Assistante
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.87522	38.9	-	LZBK01	125	3754	3597	6/17/16	3/20/17	Contig	JCVI	SAMN04993442	GCA_001666275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/275/GCA_001666275.1_ASM166627v1	-	CCF55
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.34057	57.5	-	NDBZ01	107	5384	5117	6/8/17	6/10/17	Contig	JCVI	SAMN06218037	GCA_002181635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/635/GCA_002181635.1_ASM218163v1	-	39904
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.70026	57.2	-	NDCB01	141	5862	5591	6/8/17	6/10/17	Contig	JCVI	SAMN06218035	GCA_002181665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/665/GCA_002181665.1_ASM218166v1	-	39909
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.87998	38.9	-	LZAT01	118	3755	3606	6/17/16	3/20/17	Contig	JCVI	SAMN04993381	GCA_001666305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/305/GCA_001666305.1_ASM166630v1	-	CCF26
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.87018	66	-	MWXP01	91	6610	6289	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547046	GCA_002312175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/175/GCA_002312175.1_ASM231217v1	-	146 Assistante
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.24903	39.8	-	CLRS01	74	2530	2323	3/21/15	3/11/17	Contig	SC	SAMEA1028718	GCA_001151785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/785/GCA_001151785.1_6972_3_16	-	SMRU2584
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.40213	50.5	-	JSKC01	123	5659	5279	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802061	GCA_000778335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/335/GCA_000778335.1_ASM77833v1	25373147	upec-237
Mycobacterium tuberculosis UT0002	1408905	PRJNA223537	223537	Terrabacteria group	Actinobacteria	4.51003	65.2	-	JLQH01	8	4286	4098	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02380982	GCA_000674695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/695/GCA_000674695.1_Myco_tube_UT0002_V1	-	UT0002
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.98598	37.9	-	MJSB01	20	3020	2938	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358324	GCA_001828135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/135/GCA_001828135.1_ASM182813v1	-	BCW_4785
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2770	204451	Proteobacteria	Gammaproteobacteria	4.91444	51.8	-	CJRP01	55	5109	4721	3/21/15	2/27/17	Contig	SC	SAMEA1687873	GCA_001103325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/325/GCA_001103325.1_8616_4_38	-	BCR48
Staphylococcus aureus M0097	1388056	PRJNA216225	216225	Terrabacteria group	Firmicutes	2.9027	32.7	-	JBXP01	82	3093	2946	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325180	GCA_000552065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/065/GCA_000552065.1_Stap_aure_M0097_V1	-	M0097
Staphylococcus aureus M0098	1388057	PRJNA216226	216226	Terrabacteria group	Firmicutes	2.93966	32.9	-	JBXQ01	71	3147	2948	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325181	GCA_000552085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/085/GCA_000552085.1_Stap_aure_M0098_V1	-	M0098
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69905	52.1	-	CJLL01	43	4858	4491	3/21/15	2/27/17	Contig	SC	SAMEA1930200	GCA_001103345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/345/GCA_001103345.1_10593_2_82	-	E01-5741
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.96012	37.8	-	MJSC01	16	3001	2905	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358325	GCA_001828155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/155/GCA_001828155.1_ASM182815v1	-	BCW_4786
Mycobacterium tuberculosis UT0003	1408906	PRJNA223538	223538	Terrabacteria group	Actinobacteria	4.40324	65.6	-	JLQG01	9	4289	4112	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02380983	GCA_000674715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/715/GCA_000674715.1_Myco_tube_UT0003_V1	-	UT0003
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.14926	50.6	-	JSKD01	70	5358	5057	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802060	GCA_000778355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/355/GCA_000778355.1_ASM77835v1	25373147	upec-236
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.0483	39.7	-	CKWN01	50	2241	2029	3/21/15	3/10/17	Contig	SC	SAMEA1026069	GCA_001151805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/805/GCA_001151805.1_6823_5_24	-	SMRU1968
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.87439	66	-	MWXQ01	79	6586	6309	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547045	GCA_002312195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/195/GCA_002312195.1_ASM231219v1	-	Chir_D-144
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.8358	38.9	-	LZAY01	117	3689	3550	6/17/16	3/20/17	Contig	JCVI	SAMN04993412	GCA_001666315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/315/GCA_001666315.1_ASM166631v1	-	CCF32
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.8056	56.9	-	NDCG01	175	5976	5709	6/8/17	6/10/17	Contig	JCVI	SAMN06218073	GCA_002181675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/675/GCA_002181675.1_ASM218167v1	-	40882
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.62284	57.3	-	NDCJ01	121	5737	5490	6/8/17	6/10/17	Contig	JCVI	SAMN06218124	GCA_002181705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/705/GCA_002181705.1_ASM218170v1	-	44825
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.97181	39	-	LZBC01	156	3932	3699	6/17/16	3/20/17	Contig	JCVI	SAMN04993429	GCA_001666325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/325/GCA_001666325.1_ASM166632v1	-	CCF47
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.87743	66	-	MWXU01	81	6597	6310	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547041	GCA_002312215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/215/GCA_002312215.1_ASM231221v1	-	PPF-2
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09906	39.6	-	CLAS01	48	2300	2041	3/21/15	3/11/17	Contig	SC	SAMEA1025155	GCA_001151865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/865/GCA_001151865.1_6841_7_20	-	SMRU1340
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.05874	50.5	-	JSKE01	97	5245	4909	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802059	GCA_000778375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/375/GCA_000778375.1_ASM77837v1	25373147	upec-235
Mycobacterium tuberculosis UT0004	1408907	PRJNA223539	223539	Terrabacteria group	Actinobacteria	4.41578	65.6	-	JLQF01	7	4295	4115	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02380984	GCA_000674735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/735/GCA_000674735.1_Myco_tube_UT0004_V1	-	UT0004
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.98036	37.9	-	MJSD01	22	3036	2937	9/29/16	3/2/17	Scaffold	University of California at Davis	SAMN03358326	GCA_001828165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/165/GCA_001828165.1_ASM182816v1	-	BCW_4787
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.87392	51.9	-	CJKP01	56	5081	4707	3/21/15	2/27/17	Contig	SC	SAMEA1930208	GCA_001103665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/665/GCA_001103665.1_10593_2_33	-	May-83
Staphylococcus aureus M0099	1388058	PRJNA216227	216227	Terrabacteria group	Firmicutes	2.85636	32.8	-	JBXR01	49	3010	2843	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325182	GCA_000552105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/105/GCA_000552105.1_Stap_aure_M0099_V1	-	M0099
Staphylococcus aureus M0100	1388059	PRJNA216228	216228	Terrabacteria group	Firmicutes	2.92119	32.7	-	JBXS01	76	3110	2958	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325183	GCA_000552125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/125/GCA_000552125.1_Stap_aure_M0100_V1	-	M0100
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70057	52.1	-	CIVS01	44	4863	4517	3/21/15	2/27/17	Contig	SC	SAMEA2067824	GCA_001104005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/005/GCA_001104005.1_10209_5_45	-	UI2351
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.9294	37.9	-	MJSE01	19	2939	2854	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358327	GCA_001828195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/195/GCA_001828195.1_ASM182819v1	-	BCW_4788
Mycobacterium tuberculosis UT0009	1408909	PRJNA223541	223541	Terrabacteria group	Actinobacteria	4.43144	65.5	-	JLQE01	7	4291	4118	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02380986	GCA_000674755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/755/GCA_000674755.1_Myco_tube_UT0009_V1	-	UT0009
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.09143	50.5	-	JSKF01	99	5261	4938	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802057	GCA_000778395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/395/GCA_000778395.1_ASM77839v1	25373147	upec-233
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.06358	39.6	-	CLZQ01	60	2275	2055	3/21/15	3/10/17	Contig	SC	SAMEA1028604	GCA_001151905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/905/GCA_001151905.1_6983_8_88	-	SMRU2392
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.30257	66.5	-	MWXW01	32	5965	5813	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547039	GCA_002312235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/235/GCA_002312235.1_ASM231223v1	-	578-B
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.98149	38.8	-	LZBH01	102	3830	3639	6/17/16	3/20/17	Contig	JCVI	SAMN04993437	GCA_001666365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/365/GCA_001666365.1_ASM166636v1	-	CCF52
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.51428	57.3	-	NDCK01	98	5621	5371	6/8/17	6/10/17	Contig	JCVI	SAMN06218123	GCA_002181715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/715/GCA_002181715.1_ASM218171v1	-	44826
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.43637	57.3	-	NDCL01	91	5554	5335	6/8/17	6/10/17	Contig	JCVI	SAMN06218122	GCA_002181745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/745/GCA_002181745.1_ASM218174v1	-	44827
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.97339	39	-	LZBI01	132	3863	3714	6/17/16	3/20/17	Contig	JCVI	SAMN04993438	GCA_001666385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/385/GCA_001666385.1_ASM166638v1	-	CCF53
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	7.17573	65.8	-	MWXY01	71	6988	6675	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547037	GCA_002312275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/275/GCA_002312275.1_ASM231227v1	-	PPF-20
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.06057	39.6	-	CLGB01	50	2277	2045	3/21/15	3/10/17	Contig	SC	SAMEA1025757	GCA_001152045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/045/GCA_001152045.1_6925_3_21	-	SMRU2133
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.00826	50.5	-	JSKG01	70	5076	4779	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802056	GCA_000778415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/415/GCA_000778415.1_ASM77841v1	25373147	upec-232
Mycobacterium tuberculosis UT0015	1408911	PRJNA223543	223543	Terrabacteria group	Actinobacteria	4.39238	65.6	-	JLQD01	5	4274	4105	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02380988	GCA_000674775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/775/GCA_000674775.1_Myco_tube_UT0015_V1	-	UT0015
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	2.88426	37.9	-	MJSF01	8	2938	2840	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358328	GCA_001828215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/215/GCA_001828215.1_ASM182821v1	-	BCW_4789
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.931	51.8	-	CJLO01	54	5120	4745	3/21/15	2/27/17	Contig	SC	SAMEA2155896	GCA_001104065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/065/GCA_001104065.1_10607_1_43	-	2008-006720
Staphylococcus aureus M0101	1388060	PRJNA216229	216229	Terrabacteria group	Firmicutes	2.89389	32.7	-	JBXT01	86	3081	2944	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325184	GCA_000552145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/145/GCA_000552145.1_Stap_aure_M0101_V1	-	M0101
Staphylococcus aureus M0107	1388061	PRJNA216230	216230	Terrabacteria group	Firmicutes	2.91836	32.7	-	JBXU01	74	3128	2955	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325185	GCA_000552165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/165/GCA_000552165.1_Stap_aure_M0107_V1	-	M0107
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72506	52	-	CJPU01	39	4885	4528	3/21/15	2/27/17	Contig	SC	SAMEA1572776	GCA_001104365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/365/GCA_001104365.1_8490_5_32	-	MDUST32
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.00853	38	-	MJSG01	26	3059	2973	9/29/16	3/1/17	Scaffold	University of California at Davis	SAMN03358329	GCA_001828235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/828/235/GCA_001828235.1_ASM182823v1	-	BCW_4790
Mycobacterium tuberculosis UT0016	1408912	PRJNA223544	223544	Terrabacteria group	Actinobacteria	4.41097	65.6	-	JLQC01	75	4331	4089	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02380989	GCA_000674795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/795/GCA_000674795.1_Myco_tube_UT0016_V1	-	UT0016
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.29553	50.4	-	JSKI01	142	5475	5094	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802054	GCA_000778435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/435/GCA_000778435.1_ASM77843v1	25373147	upec-230
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.13958	39.6	-	CNQH02	237	2339	2126	3/22/15	3/11/17	Contig	SC	SAMEA1032715	GCA_001152225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/225/GCA_001152225.2_6952_7_16	-	R34-3176
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.67251	66.3	-	MWXZ01	41	6474	6284	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547036	GCA_002312295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/295/GCA_002312295.1_ASM231229v1	-	PPF-19
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.8247	38.9	-	LZBL01	118	3690	3542	6/17/16	3/20/17	Contig	JCVI	SAMN04993444	GCA_001666395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/395/GCA_001666395.1_ASM166639v1	-	CCF57
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.70598	57.1	-	NDCM01	116	5869	5597	6/8/17	6/10/17	Contig	JCVI	SAMN06218121	GCA_002181755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/755/GCA_002181755.1_ASM218175v1	-	44828
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.59353	57.2	-	NDCQ01	112	5732	5483	6/8/17	6/10/17	Contig	JCVI	SAMN06218117	GCA_002181785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/785/GCA_002181785.1_ASM218178v1	-	45704
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.87248	38.9	-	LZBM01	125	3747	3588	6/17/16	3/20/17	Contig	JCVI	SAMN04993445	GCA_001666405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/405/GCA_001666405.1_ASM166640v1	-	CCF58
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.66738	66.3	-	MWYB01	60	6480	6269	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547034	GCA_002312315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/315/GCA_002312315.1_ASM231231v1	-	Urg-7
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.11289	39.5	-	CRFV01	46	2327	2112	3/22/15	3/10/17	Contig	SC	SAMEA1025241	GCA_001152245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/245/GCA_001152245.1_6736_5_18	-	19F
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.82826	50.6	-	JSKT01	360	5146	4559	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802042	GCA_000778635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/635/GCA_000778635.1_ASM77863v1	25373147	upec-22
Mycobacterium tuberculosis UT0020	1408913	PRJNA223545	223545	Terrabacteria group	Actinobacteria	4.41128	65.6	-	JLQB01	47	4293	4097	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02380990	GCA_000674815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/815/GCA_000674815.1_Myco_tube_UT0020_V1	-	UT0020
Listeria monocytogenes	1639	PRJNA309902	309902	Terrabacteria group	Firmicutes	3.03854	37.9	-	LRTW01	11	3107	3022	2/15/17	3/2/17	Scaffold	Shanghai Jiao Tong University	SAMN04441844	GCA_002000265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/265/GCA_002000265.1_ASM200026v1	-	SHL12-2
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72503	52	-	CIVC01	48	4875	4516	3/21/15	2/27/17	Contig	SC	SAMEA2064544	GCA_001104965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/965/GCA_001104965.1_10209_5_31	-	UI1954-12/3
Staphylococcus aureus M0109	1388062	PRJNA216231	216231	Terrabacteria group	Firmicutes	2.91874	32.7	-	JBXV01	68	3111	2960	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325186	GCA_000552185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/185/GCA_000552185.1_Stap_aure_M0109_V1	-	M0109
Staphylococcus aureus M0110	1388063	PRJNA216232	216232	Terrabacteria group	Firmicutes	2.87194	32.9	-	JBXW01	17	3010	2842	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325187	GCA_000552205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/205/GCA_000552205.1_Stap_aure_M0110_V1	-	M0110
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72312	52	-	CILO01	40	4883	4531	3/21/15	2/27/17	Contig	SC	SAMEA1572820	GCA_001105205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/205/GCA_001105205.1_8490_5_31	-	MDUST31
Listeria monocytogenes	1639	PRJNA309903	309903	Terrabacteria group	Firmicutes	3.01573	37.8	-	LRTX01	14	3087	2995	2/15/17	3/2/17	Scaffold	Shanghai Jiao Tong University	SAMN04441845	GCA_002000285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/285/GCA_002000285.1_ASM200028v1	-	SHL12-22
Mycobacterium tuberculosis UT0022	1408914	PRJNA223546	223546	Terrabacteria group	Actinobacteria	4.43095	65.5	-	JLQA01	6	4305	4111	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02380991	GCA_000674835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/835/GCA_000674835.1_Myco_tube_UT0022_V1	-	UT0022
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.15308	50.5	-	JSKN01	91	5277	4938	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802049	GCA_000778685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/685/GCA_000778685.1_ASM77868v1	25373147	upec-226
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.14073	39.4	-	CNVF02	177	2310	2088	3/22/15	3/11/17	Contig	SC	SAMEA1032621	GCA_001152265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/265/GCA_001152265.2_6999_7_1	-	334847
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.67212	66.3	-	MWYD01	47	6463	6276	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547032	GCA_002312335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/335/GCA_002312335.1_ASM231233v1	-	Ortho-1
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.99243	39	-	LZBN01	129	3881	3731	6/17/16	3/20/17	Contig	JCVI	SAMN04993447	GCA_001666425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/425/GCA_001666425.1_ASM166642v1	-	CCF59
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.57332	57.1	-	NDCT01	101	5722	5472	6/8/17	6/10/17	Contig	JCVI	SAMN06218114	GCA_002181795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/795/GCA_002181795.1_ASM218179v1	-	45707
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.87629	56.9	-	NDDE01	173	6042	5745	6/8/17	6/10/17	Contig	JCVI	SAMN06218091	GCA_002181825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/825/GCA_002181825.1_ASM218182v1	-	43416
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.88084	38.9	-	LZBO01	118	3763	3608	6/17/16	3/20/17	Contig	JCVI	SAMN04993449	GCA_001666465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/465/GCA_001666465.1_ASM166646v1	-	CCF60
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.81222	66.2	-	MWYG01	46	6532	6327	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547029	GCA_002312375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/375/GCA_002312375.1_ASM231237v1	-	358
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.05333	39.7	-	CMLM01	51	2258	2034	3/22/15	3/11/17	Contig	SC	SAMEA1029394	GCA_001152385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/385/GCA_001152385.1_7054_6_10	-	SMRU3082
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.12619	50.7	-	JSKS01	110	5403	5020	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802043	GCA_000778705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/705/GCA_000778705.1_ASM77870v1	25373147	upec-220
Mycobacterium tuberculosis UT0024	1408915	PRJNA223547	223547	Terrabacteria group	Actinobacteria	4.35753	65.6	-	JLPZ01	6	4249	4084	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02380992	GCA_000674855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/855/GCA_000674855.1_Myco_tube_UT0024_V1	-	UT0024
Listeria monocytogenes	1639	PRJNA309905	309905	Terrabacteria group	Firmicutes	2.98676	38	-	LRTY01	14	3015	2935	2/15/17	3/2/17	Scaffold	Shanghai Jiao Tong University	SAMN04441865	GCA_002000295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/295/GCA_002000295.1_ASM200029v1	-	SHL13-12
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93604	51.8	-	CJNE01	62	5144	4748	3/21/15	2/27/17	Contig	SC	SAMEA2143383	GCA_001105645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/645/GCA_001105645.1_10608_2_25	-	01-2012-002891
Staphylococcus aureus M0111	1388064	PRJNA216233	216233	Terrabacteria group	Firmicutes	2.92193	32.7	-	JBXX01	70	3112	2966	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325188	GCA_000552225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/225/GCA_000552225.1_Stap_aure_M0111_V1	-	M0111
Staphylococcus aureus M0112	1388065	PRJNA216234	216234	Terrabacteria group	Firmicutes	2.9313	32.9	-	JBXY01	26	3098	2930	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325189	GCA_000552245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/245/GCA_000552245.1_Stap_aure_M0112_V1	-	M0112
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.73874	52.1	-	CILL01	50	4910	4562	3/21/15	2/27/17	Contig	SC	SAMEA1406343	GCA_001105925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/925/GCA_001105925.1_7468_7_81	-	IB5370
Listeria monocytogenes	1639	PRJNA345525	345525	Terrabacteria group	Firmicutes	2.97122	37.9	-	MKXC01	18	3036	2936	3/6/17	3/8/17	Scaffold	Hangzhou Center for Disease Control and Prevention	SAMN05868142	GCA_002019485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/485/GCA_002019485.1_ASM201948v1	-	LMO-020
Mycobacterium tuberculosis TB_RSA78	1421994	PRJNA228072	228072	Terrabacteria group	Actinobacteria	4.40794	65.6	-	JKUO01	7	4291	4123	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403519	GCA_000674875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/875/GCA_000674875.1_Myco_tube_TB_RSA78_V1	-	TB_RSA78
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.02312	50.7	-	JSKU01	62	5104	4813	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802041	GCA_000778725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/725/GCA_000778725.1_ASM77872v1	25373147	upec-219
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.01365	39.8	-	CLSL01	63	2215	1976	3/21/15	3/10/17	Contig	SC	SAMEA1028863	GCA_001152405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/405/GCA_001152405.1_6972_4_10	-	SMRU2602
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.72941	66.3	-	MWYH01	33	6423	6248	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547028	GCA_002312385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/385/GCA_002312385.1_ASM231238v1	-	279
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	4.04908	39	-	LZBP01	77	3943	3781	6/17/16	3/20/17	Contig	JCVI	SAMN04993451	GCA_001666475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/475/GCA_001666475.1_ASM166647v1	-	CCF62
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.60291	57.2	-	NDCV01	140	5758	5500	6/8/17	6/10/17	Contig	JCVI	SAMN06218112	GCA_002181835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/835/GCA_002181835.1_ASM218183v1	-	45709
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.58542	57.2	-	NDDW01	100	5719	5472	6/8/17	6/10/17	Contig	JCVI	SAMN06218029	GCA_002181865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/865/GCA_002181865.1_ASM218186v1	-	44821
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.85018	38.9	-	LZBQ01	125	3721	3572	6/17/16	3/20/17	Contig	JCVI	SAMN04993453	GCA_001666485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/485/GCA_001666485.1_ASM166648v1	-	CCF63
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.99541	66	-	MWYI01	73	6683	6455	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547027	GCA_002312405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/405/GCA_002312405.1_ASM231240v1	-	392
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.06701	39.7	-	CKGS01	49	2293	2083	3/21/15	3/10/17	Contig	SC	SAMEA1023862	GCA_001152425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/425/GCA_001152425.1_6631_1_18	-	32F
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.87716	50.7	-	JSKL01	230	5140	4727	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802051	GCA_000778815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/815/GCA_000778815.1_ASM77881v1	25373147	upec-228
Mycobacterium tuberculosis TB_RSA79	1421995	PRJNA228073	228073	Terrabacteria group	Actinobacteria	4.42272	65.5	-	JKUN01	4	4290	4123	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403520	GCA_000674895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/895/GCA_000674895.1_Myco_tube_TB_RSA79_V1	-	TB_RSA79
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.90895	37.9	-	MTDL01	36	2947	2844	5/11/17	5/23/17	Scaffold	FDA	SAMN03253341	GCA_002131885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/885/GCA_002131885.1_ASM213188v1	28464038	PNUSAL001135
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71664	52.1	-	CJYI01	39	4864	4500	3/21/15	2/27/17	Contig	SC	SAMEA2059365	GCA_001106045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/045/GCA_001106045.1_9953_5_64	-	LNT1197
Staphylococcus aureus M0115	1388067	PRJNA216236	216236	Terrabacteria group	Firmicutes	2.89496	32.9	-	JBXZ01	23	3047	2886	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325191	GCA_000552265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/265/GCA_000552265.1_Stap_aure_M0115_V1	-	M0115
Staphylococcus aureus M0116	1388068	PRJNA216237	216237	Terrabacteria group	Firmicutes	2.92289	32.9	-	JBYA01	22	3078	2911	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325192	GCA_000552285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/285/GCA_000552285.1_Stap_aure_M0116_V1	-	M0116
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73353	52	-	CJLJ01	42	4901	4543	3/21/15	2/27/17	Contig	SC	SAMEA1930160	GCA_001106085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/085/GCA_001106085.1_10593_2_75	-	E99-8095
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.9119	37.9	-	MTDK01	23	2947	2851	5/11/17	5/24/17	Scaffold	FDA	SAMN02429381	GCA_002131895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/895/GCA_002131895.1_ASM213189v1	28464038	PNUSAL000441
Mycobacterium tuberculosis TB_RSA80	1421996	PRJNA228074	228074	Terrabacteria group	Actinobacteria	4.40719	65.5	-	JKUM01	2	4283	4116	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403521	GCA_000674915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/915/GCA_000674915.1_Myco_tube_TB_RSA80_V1	-	TB_RSA80
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.98025	50.7	-	JSKR01	102	5074	4738	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802044	GCA_000778895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/895/GCA_000778895.1_ASM77889v1	25373147	upec-221
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.01156	39.6	-	CQVS01	43	2211	1996	3/23/15	3/11/17	Contig	SC	SAMEA1025166	GCA_001152485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/485/GCA_001152485.1_6710_8_13	-	SMRU1405
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.56886	66.3	-	MWYJ01	59	6293	6122	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547026	GCA_002312415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/415/GCA_002312415.1_ASM231241v1	-	E-500
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.87312	38.9	-	LZBR01	135	3752	3587	6/17/16	3/20/17	Contig	JCVI	SAMN04993455	GCA_001666515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/515/GCA_001666515.1_ASM166651v1	-	CCF64
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.66582	57.1	-	NDDG01	64	5673	5425	6/8/17	6/10/17	Contig	JCVI	SAMN06218089	GCA_002181875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/875/GCA_002181875.1_ASM218187v1	-	43420
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.60726	57.2	-	NDDX01	73	5662	5410	6/8/17	6/10/17	Contig	JCVI	SAMN06218128	GCA_002181895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/895/GCA_002181895.1_ASM218189v1	-	44822
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.87344	38.9	-	LZBT01	120	3755	3606	6/17/16	3/20/17	Contig	JCVI	SAMN04993390	GCA_001666545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/545/GCA_001666545.1_ASM166654v1	-	CCF66
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.43673	66.4	-	MWYK01	35	6107	5940	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547025	GCA_002312455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/455/GCA_002312455.1_ASM231245v1	-	359
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.11101	39.5	-	COBS02	213	2278	2072	3/23/15	3/11/17	Contig	SC	SAMEA1463219	GCA_001152525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/525/GCA_001152525.2_7622_2_9	-	BR1023
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.97279	50.6	-	JSKM01	79	5134	4845	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802050	GCA_000778935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/935/GCA_000778935.1_ASM77893v1	25373147	upec-227
Mycobacterium tuberculosis TB_RSA81	1421997	PRJNA228075	228075	Terrabacteria group	Actinobacteria	4.39728	65.6	-	JKUL01	9	4269	4109	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403522	GCA_000674935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/935/GCA_000674935.1_Myco_tube_TB_RSA81_V1	-	TB_RSA81
Listeria monocytogenes CFSAN002349	1299895	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.9107	37.9	-	MTHA01	17	2947	2851	5/11/17	5/23/17	Scaffold	FDA	SAMN01939119	GCA_002131925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/925/GCA_002131925.1_ASM213192v1	28464038	CFSAN002349
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74208	52.1	-	CJMP01	49	4904	4539	3/21/15	2/27/17	Contig	SC	SAMEA2156001	GCA_001106305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/305/GCA_001106305.1_10607_2_27	-	BKQ4E3
Staphylococcus aureus M0117	1388069	PRJNA216238	216238	Terrabacteria group	Firmicutes	2.85815	32.8	-	JBYB01	56	3009	2842	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325193	GCA_000552305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/305/GCA_000552305.1_Stap_aure_M0117_V1	-	M0117
Staphylococcus aureus M0118	1388070	PRJNA216239	216239	Terrabacteria group	Firmicutes	2.83581	32.8	-	JBYC01	38	2983	2824	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325194	GCA_000552325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/325/GCA_000552325.1_Stap_aure_M0118_V1	-	M0118
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93347	51.8	-	CJWK01	69	5139	4750	3/21/15	2/27/17	Contig	SC	SAMEA2055779	GCA_001106645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/645/GCA_001106645.1_9870_8_84	-	2008-017452
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.95173	37.8	-	MTCL01	22	3013	2914	5/11/17	5/24/17	Scaffold	FDA	SAMN03299421	GCA_002131935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/935/GCA_002131935.1_ASM213193v1	28464038	FDA00008761
Mycobacterium tuberculosis TB_RSA82	1421998	PRJNA228076	228076	Terrabacteria group	Actinobacteria	4.39577	65.6	-	JKUK01	13	4268	4102	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403523	GCA_000674955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/955/GCA_000674955.1_Myco_tube_TB_RSA82_V1	-	TB_RSA82
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.14786	50.5	-	JSKO01	83	5282	4945	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802048	GCA_000778955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/955/GCA_000778955.1_ASM77895v1	25373147	upec-225
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.11733	39.6	-	CRIW01	54	2332	2097	3/22/15	3/10/17	Contig	SC	SAMEA1025279	GCA_001152545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/545/GCA_001152545.1_6753_1_22	-	SMRU1486
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.31014	66.6	-	MWYL01	37	5976	5820	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547024	GCA_002312465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/465/GCA_002312465.1_ASM231246v1	-	585
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.88095	38.9	-	LZBS01	123	3760	3603	6/17/16	3/20/17	Contig	JCVI	SAMN04993388	GCA_001666555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/555/GCA_001666555.1_ASM166655v1	-	CCF65
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.39335	57.3	-	NDDF01	46	5424	5202	6/8/17	6/10/17	Contig	JCVI	SAMN06218090	GCA_002181915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/915/GCA_002181915.1_ASM218191v1	-	43419
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.47005	57.2	-	NDDN01	51	5525	5288	6/8/17	6/10/17	Contig	JCVI	SAMN06218082	GCA_002181945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/945/GCA_002181945.1_ASM218194v1	-	44812
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.86612	38.8	-	LZBV01	110	3748	3597	6/17/16	3/20/17	Contig	JCVI	SAMN04993397	GCA_001666565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/565/GCA_001666565.1_ASM166656v1	-	CCF68
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.39593	66.4	-	MWYP01	36	6075	5908	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547020	GCA_002312495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/495/GCA_002312495.1_ASM231249v1	-	VD564
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.08095	39.5	-	CKIO01	49	2323	2086	3/21/15	3/10/17	Contig	SC	SAMEA1023844	GCA_001152605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/605/GCA_001152605.1_6631_4_13	-	10B
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.22746	50.5	-	JSLK01	85	5379	5056	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802022	GCA_000779255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/255/GCA_000779255.1_ASM77925v1	25373147	upec-201
Mycobacterium tuberculosis TB_RSA83	1421999	PRJNA228077	228077	Terrabacteria group	Actinobacteria	4.42198	65.5	-	JKUJ01	6	4292	4118	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403524	GCA_000674975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/975/GCA_000674975.1_Myco_tube_TB_RSA83_V1	-	TB_RSA83
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.9099	37.9	-	MTFL01	16	2950	2854	5/11/17	5/23/17	Scaffold	FDA	SAMN02990455	GCA_002131965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/965/GCA_002131965.1_LS1006.fasta	28464038	MOD1_LS1006
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71572	52.1	-	CJJE01	44	4870	4511	3/21/15	2/27/17	Contig	SC	SAMEA1930260	GCA_001107065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/065/GCA_001107065.1_10592_2_36	-	Sep-18
Staphylococcus aureus M0119	1388071	PRJNA216240	216240	Terrabacteria group	Firmicutes	2.84424	32.8	-	JBYD01	14	2958	2787	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325195	GCA_000552345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/345/GCA_000552345.1_Stap_aure_M0119_V1	-	M0119
Staphylococcus aureus M0120	1388072	PRJNA216241	216241	Terrabacteria group	Firmicutes	2.91058	32.9	-	JBYE01	29	3071	2900	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325196	GCA_000552365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/365/GCA_000552365.1_Stap_aure_M0120_V1	-	M0120
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73391	52	-	CJYD01	40	4893	4551	3/21/15	2/27/17	Contig	SC	SAMEA2057364	GCA_001107585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/585/GCA_001107585.1_9953_5_59	-	A396
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.90979	37.9	-	MTFM01	13	2942	2848	5/11/17	5/23/17	Scaffold	FDA	SAMN02991375	GCA_002131975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/975/GCA_002131975.1_LS982.fasta	28464038	MOD1_LS982
Mycobacterium tuberculosis TB_RSA84	1422000	PRJNA228078	228078	Terrabacteria group	Actinobacteria	4.40258	65.6	-	JKUI01	9	4270	4107	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403525	GCA_000674995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/674/995/GCA_000674995.1_Myco_tube_TB_RSA84_V1	-	TB_RSA84
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.79434	50.6	-	JSLJ01	58	4894	4621	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802023	GCA_000779295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/295/GCA_000779295.1_ASM77929v1	25373147	upec-202
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.11954	39.4	-	CQUX01	60	2353	2139	3/23/15	3/4/17	Contig	SC	SAMEA1025234	GCA_001152745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/745/GCA_001152745.1_6710_7_12	-	SMRU1380
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.39658	66.4	-	MWYR01	38	6079	5902	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547018	GCA_002312505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/505/GCA_002312505.1_ASM231250v1	-	VD329
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.87297	38.9	-	LZBU01	115	3750	3598	6/17/16	3/20/17	Contig	JCVI	SAMN04993393	GCA_001666575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/575/GCA_001666575.1_ASM166657v1	-	CCF67
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.39396	57.3	-	NDDH01	47	5435	5202	6/8/17	6/10/17	Contig	JCVI	SAMN06218088	GCA_002181955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/955/GCA_002181955.1_ASM218195v1	-	43421
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.59475	57.1	-	NDDY01	126	5728	5476	6/8/17	6/10/17	Contig	JCVI	SAMN06218127	GCA_002181965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/965/GCA_002181965.1_ASM218196v1	-	44823
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.87553	38.9	-	LZBW01	119	3748	3604	6/17/16	3/20/17	Contig	JCVI	SAMN04993399	GCA_001666625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/625/GCA_001666625.1_ASM166662v1	-	CCF69
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.39863	66.4	-	MWXI01	43	6093	5913	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547053	GCA_002312535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/535/GCA_002312535.1_ASM231253v1	-	354
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.06199	39.7	-	CMEG01	73	2282	2063	3/21/15	3/4/17	Contig	SC	SAMEA1028943	GCA_001152825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/825/GCA_001152825.1_7011_4_5	-	SMRU2765
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.40189	50.6	-	JSLL01	217	5714	5184	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802021	GCA_000779335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/335/GCA_000779335.1_ASM77933v1	25373147	upec-200
Mycobacterium tuberculosis TB_RSA85	1422001	PRJNA228079	228079	Terrabacteria group	Actinobacteria	4.41298	65.6	-	JKUH01	7	4306	4109	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403526	GCA_000675015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/015/GCA_000675015.1_Myco_tube_TB_RSA85_V1	-	TB_RSA85
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.90973	37.9	-	MTFJ01	14	2948	2851	5/11/17	5/23/17	Scaffold	FDA	SAMN02991389	GCA_002132005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/005/GCA_002132005.1_LS1003.fasta	28464038	MOD1_LS1003
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2770	204451	Proteobacteria	Gammaproteobacteria	4.75627	52	-	CJRR01	43	4930	4577	3/21/15	2/27/17	Contig	SC	SAMEA1687864	GCA_001107705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/705/GCA_001107705.1_8616_4_44	-	BCR108
Staphylococcus aureus M0122	1388073	PRJNA216242	216242	Terrabacteria group	Firmicutes	2.90516	32.9	-	JBYF01	29	3060	2892	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325197	GCA_000552385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/385/GCA_000552385.1_Stap_aure_M0122_V1	-	M0122
Staphylococcus aureus M0123	1388074	PRJNA216243	216243	Terrabacteria group	Firmicutes	2.89303	32.8	-	JBYG01	72	3084	2932	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325198	GCA_000552405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/405/GCA_000552405.1_Stap_aure_M0123_V1	-	M0123
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.94773	51.8	-	CIUV01	58	5151	4756	3/21/15	2/27/17	Contig	SC	SAMEA2066521	GCA_001107805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/805/GCA_001107805.1_10209_5_17	-	2007-023116
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.90975	37.9	-	MTFK01	17	2954	2850	5/11/17	5/23/17	Scaffold	FDA	SAMN02991394	GCA_002132025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/025/GCA_002132025.1_LS1011.fasta	28464038	MOD1_LS1011
Mycobacterium tuberculosis TB_RSA86	1422002	PRJNA228080	228080	Terrabacteria group	Actinobacteria	4.43231	65.5	-	JKUG01	7	4306	4111	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403527	GCA_000675035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/035/GCA_000675035.1_Myco_tube_TB_RSA86_V1	-	TB_RSA86
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.10216	50.3	-	JSLN01	608	5559	4954	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802019	GCA_000779395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/395/GCA_000779395.1_ASM77939v1	25373147	upec-2
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.15075	39.6	-	CKQJ01	66	2410	2169	3/21/15	3/4/17	Contig	SC	SAMEA1024727	GCA_001152865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/865/GCA_001152865.1_6680_6_23	-	SMRU959
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.85754	66.1	-	MWXJ01	37	6524	6306	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547052	GCA_002312545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/545/GCA_002312545.1_ASM231254v1	-	265
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.88034	38.9	-	LZBX01	115	3753	3606	6/17/16	3/20/17	Contig	JCVI	SAMN04993401	GCA_001666635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/635/GCA_001666635.1_ASM166663v1	-	CCF70
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.60681	57.2	-	NDED01	118	5769	5519	6/8/17	6/10/17	Contig	JCVI	SAMN06218057	GCA_002182005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/005/GCA_002182005.1_ASM218200v1	-	42184
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.74423	57	-	NDEH01	96	5882	5580	6/8/17	6/10/17	Contig	JCVI	SAMN06218052	GCA_002182045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/045/GCA_002182045.1_ASM218204v1	-	42194
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.87989	38.9	-	LZBY01	126	3750	3603	6/17/16	3/20/17	Contig	JCVI	SAMN04993405	GCA_001666645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/645/GCA_001666645.1_ASM166664v1	-	CCF72
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.49149	66.2	-	MWXM01	31	6230	6046	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547049	GCA_002312575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/575/GCA_002312575.1_ASM231257v1	-	707A
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05269	39.6	-	CNOO02	138	2248	2045	3/23/15	3/11/17	Contig	SC	SAMEA1032647	GCA_001152925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/925/GCA_001152925.2_6925_2_90	-	R34-3072
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.20026	50.6	-	JSLQ01	81	5440	5130	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802015	GCA_000779475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/475/GCA_000779475.1_ASM77947v1	25373147	upec-196
Mycobacterium tuberculosis TB_RSA87	1422003	PRJNA228081	228081	Terrabacteria group	Actinobacteria	4.40522	65.5	-	JKUF01	10	4273	4102	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403528	GCA_000675055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/055/GCA_000675055.1_Myco_tube_TB_RSA87_V1	-	TB_RSA87
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.91024	37.9	-	MTDI01	16	2947	2850	5/11/17	5/23/17	Scaffold	FDA	SAMN02990451	GCA_002132045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/045/GCA_002132045.1_ASM213204v1	28464038	MOD1_LS991
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74117	52.1	-	CJYX01	42	4916	4564	3/21/15	2/27/17	Contig	SC	SAMEA2057371	GCA_001107945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/945/GCA_001107945.1_9953_5_80	-	LNT266
Staphylococcus aureus M0124	1388075	PRJNA216244	216244	Terrabacteria group	Firmicutes	2.87686	32.9	-	JBYH01	18	3009	2840	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325199	GCA_000552425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/425/GCA_000552425.1_Stap_aure_M0124_V1	-	M0124
Staphylococcus aureus M0125	1388076	PRJNA216245	216245	Terrabacteria group	Firmicutes	2.91173	32.9	-	JBYI01	72	3095	2899	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325200	GCA_000552445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/445/GCA_000552445.1_Stap_aure_M0125_V1	-	M0125
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7237	52	-	CILP01	44	4891	4534	3/21/15	2/27/17	Contig	SC	SAMEA1572765	GCA_001108125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/125/GCA_001108125.1_8490_6_47	-	MDUST47
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.90849	37.9	-	MTFR01	30	2938	2846	5/11/17	5/23/17	Scaffold	FDA	SAMN03277690	GCA_002132055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/055/GCA_002132055.1_ASM213205v1	28464038	NRRL B-33590
Mycobacterium tuberculosis TB_RSA88	1422004	PRJNA228082	228082	Terrabacteria group	Actinobacteria	4.4031	65.6	-	JKUE01	7	4276	4105	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403529	GCA_000675075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/075/GCA_000675075.1_Myco_tube_TB_RSA88_V1	-	TB_RSA88
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.23219	50.4	-	JSPV01	120	5454	5005	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801888	GCA_000779615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/615/GCA_000779615.1_ASM77961v1	25373147	blood-10-1386
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12769	39.5	-	CKTU01	76	2342	2097	3/21/15	3/6/17	Contig	SC	SAMEA1025762	GCA_001153065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/065/GCA_001153065.1_6823_2_15	-	SMRU1887
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.8704	66	-	MWXR01	81	6589	6304	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547044	GCA_002312585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/585/GCA_002312585.1_ASM231258v1	-	PPF-7
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	4.22754	39	-	LZBZ01	99	4164	4001	6/17/16	3/20/17	Contig	JCVI	SAMN04993407	GCA_001666665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/665/GCA_001666665.1_ASM166666v1	-	CCF73
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.5827	57.2	-	NDEJ01	108	5755	5503	6/8/17	6/10/17	Contig	JCVI	SAMN06218050	GCA_002182055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/055/GCA_002182055.1_ASM218205v1	-	42196
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.7259	57.2	-	NDEF01	170	5921	5631	6/8/17	6/10/17	Contig	JCVI	SAMN06218055	GCA_002182065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/065/GCA_002182065.1_ASM218206v1	-	42188
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	3.97419	39.1	-	LZCA01	166	3937	3696	6/17/16	3/20/17	Contig	JCVI	SAMN04993409	GCA_001666705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/705/GCA_001666705.1_ASM166670v1	-	CCF74
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.69276	66.2	-	MWXV01	70	6406	6190	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547040	GCA_002312615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/615/GCA_002312615.1_ASM231261v1	-	506
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.11553	39.7	-	CLLR01	61	2275	2038	3/21/15	3/4/17	Contig	SC	SAMEA1028603	GCA_001153085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/085/GCA_001153085.1_6938_6_17	-	SMRU2681
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.08623	50.7	-	JSLY01	99	5355	5008	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802003	GCA_000779695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/695/GCA_000779695.1_ASM77969v1	25373147	upec-185
Mycobacterium tuberculosis TB_RSA89	1422005	PRJNA228083	228083	Terrabacteria group	Actinobacteria	4.43883	65.5	-	JKUD01	13	4301	4131	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403530	GCA_000675095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/095/GCA_000675095.1_Myco_tube_TB_RSA89_V1	-	TB_RSA89
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.91031	37.9	-	MTDH01	14	2947	2852	5/11/17	5/24/17	Scaffold	FDA	SAMN02990453	GCA_002132095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/095/GCA_002132095.1_ASM213209v1	28464038	MOD1_LS999
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93278	51.8	-	CJWF01	62	5133	4747	3/21/15	2/27/17	Contig	SC	SAMEA2055778	GCA_001108265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/265/GCA_001108265.1_9870_8_81	-	01-2012-002529
Staphylococcus aureus M0127	1388078	PRJNA216247	216247	Terrabacteria group	Firmicutes	2.87897	32.8	-	JBYJ01	63	3057	2889	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325202	GCA_000552465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/465/GCA_000552465.1_Stap_aure_M0127_V1	-	M0127
Staphylococcus aureus M0128	1388079	PRJNA216248	216248	Terrabacteria group	Firmicutes	2.88988	32.8	-	JBYK01	65	3072	2880	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325203	GCA_000552485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/485/GCA_000552485.1_Stap_aure_M0128_V1	-	M0128
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72535	52.1	-	CJLG01	43	4887	4532	3/21/15	2/27/17	Contig	SC	SAMEA1930185	GCA_001108685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/685/GCA_001108685.1_10593_2_68	-	E02-0937
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.91202	37.9	-	MTDE01	14	2947	2851	5/11/17	5/23/17	Scaffold	FDA	SAMN02991388	GCA_002132125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/125/GCA_002132125.1_ASM213212v1	28464038	MOD1_LS1002
Mycobacterium tuberculosis TB_RSA90	1422006	PRJNA228084	228084	Terrabacteria group	Actinobacteria	4.43888	65.5	-	JKUC01	14	4313	4096	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403531	GCA_000675115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/115/GCA_000675115.1_Myco_tube_TB_RSA90_V1	-	TB_RSA90
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.34112	50.7	-	JSPC01	114	5646	5271	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801907	GCA_000779745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/745/GCA_000779745.1_ASM77974v1	25373147	blood-B11-136
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.07301	39.6	-	CMPH01	47	2253	1989	3/23/15	3/15/17	Contig	SC	SAMEA2061503	GCA_001153105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/105/GCA_001153105.1_9803_7_54	-	type strain: N
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	7.17314	65.8	-	MWXX01	78	6970	6656	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547038	GCA_002312625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/625/GCA_002312625.1_ASM231262v1	-	PPF-13
Acinetobacter baumannii	470	PRJNA316619	316619	Proteobacteria	Gammaproteobacteria	4.00585	39	-	LZCB01	124	3898	3741	6/17/16	3/20/17	Contig	JCVI	SAMN04993411	GCA_001666715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/666/715/GCA_001666715.1_ASM166671v1	-	CCF75
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.85979	57	-	NDEL01	152	6030	5739	6/8/17	6/10/17	Contig	JCVI	SAMN06218108	GCA_002182125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/125/GCA_002182125.1_ASM218212v1	-	42338
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.58593	57.2	-	NDEK01	102	5760	5504	6/8/17	6/10/17	Contig	JCVI	SAMN06218049	GCA_002182135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/135/GCA_002182135.1_ASM218213v1	-	42261
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.86318	38.8	-	LZUO01	138	3747	3592	6/17/16	3/20/17	Contig	JCVI	SAMN05238587	GCA_001668445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/668/445/GCA_001668445.1_ASM166844v1	-	ABUH714
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.67188	66.3	-	MWYA01	45	6470	6285	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547035	GCA_002312645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/645/GCA_002312645.1_ASM231264v1	-	Urg-5
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.03079	39.7	-	CNZW02	104	2227	2027	3/23/15	3/11/17	Contig	SC	SAMEA1463116	GCA_001153205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/205/GCA_001153205.2_7553_5_86	-	PT8072
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.50928	50.7	-	JSPU01	110	5856	5435	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801889	GCA_000779775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/775/GCA_000779775.1_ASM77977v1	25373147	blood-10-1607
Mycobacterium tuberculosis TB_RSA91	1422007	PRJNA228085	228085	Terrabacteria group	Actinobacteria	4.41002	65.5	-	JKUB01	4	4268	4108	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403532	GCA_000675135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/135/GCA_000675135.1_Myco_tube_TB_RSA91_V1	-	TB_RSA91
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.91079	37.9	-	MTFP01	13	2951	2851	5/11/17	5/23/17	Scaffold	FDA	SAMN02991385	GCA_002132135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/135/GCA_002132135.1_LS998.fasta	28464038	MOD1_LS998
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93281	51.8	-	CJUH01	55	5125	4748	3/21/15	2/27/17	Contig	SC	SAMEA2056497	GCA_001108905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/905/GCA_001108905.1_9870_8_11	-	2009-000156
Staphylococcus aureus M0131	1388080	PRJNA216249	216249	Terrabacteria group	Firmicutes	2.92785	32.9	-	JBYL01	66	3135	2951	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325204	GCA_000552505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/505/GCA_000552505.1_Stap_aure_M0131_V1	-	M0131
Staphylococcus aureus M0132	1388081	PRJNA216250	216250	Terrabacteria group	Firmicutes	2.86096	32.8	-	JBYM01	36	3000	2839	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325205	GCA_000552535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/535/GCA_000552535.1_Stap_aure_M0132_V1	-	M0132
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93271	51.8	-	CJNI01	64	5137	4746	3/21/15	2/27/17	Contig	SC	SAMEA2151542	GCA_001109025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/025/GCA_001109025.1_10608_2_39	-	2012-010759
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.91107	37.9	-	MTFG01	14	2946	2850	5/11/17	5/23/17	Scaffold	FDA	SAMN02991378	GCA_002132185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/185/GCA_002132185.1_LS989.fasta	28464038	MOD1_LS989
Mycobacterium tuberculosis TB_RSA92	1422008	PRJNA228086	228086	Terrabacteria group	Actinobacteria	4.40624	65.5	-	JKUA01	5	4265	4111	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403533	GCA_000675155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/155/GCA_000675155.1_Myco_tube_TB_RSA92_V1	-	TB_RSA92
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.01105	50.6	-	JSMD01	85	5169	4839	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801996	GCA_000779835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/835/GCA_000779835.1_ASM77983v1	25373147	upec-179
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.16209	39.6	-	CLCR01	48	2366	2149	3/21/15	3/4/17	Contig	SC	SAMEA1025870	GCA_001153305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/305/GCA_001153305.1_6871_2_8	-	SMRU1832
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.67192	66.3	-	MWYE01	72	6455	6248	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547031	GCA_002312675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/675/GCA_002312675.1_ASM231267v1	-	PPF-18
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.76585	38.9	-	LZUR01	150	3613	3463	6/17/16	3/20/17	Contig	JCVI	SAMN05238697	GCA_001668465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/668/465/GCA_001668465.1_ASM166846v1	-	ABUH773
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.8498	56.7	-	NDEM01	117	5968	5686	6/8/17	6/10/17	Contig	JCVI	SAMN06218107	GCA_002182145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/145/GCA_002182145.1_ASM218214v1	-	42339
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.4337	57.3	-	NDEO01	89	5540	5324	6/8/17	6/10/17	Contig	JCVI	SAMN06218105	GCA_002182155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/155/GCA_002182155.1_ASM218215v1	-	42363
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.84467	38.9	-	LZWI01	119	3706	3560	6/17/16	3/20/17	Contig	JCVI	SAMN05238658	GCA_001668475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/668/475/GCA_001668475.1_ASM166847v1	-	ABUH726
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	7.17199	65.8	-	MWYC01	63	6964	6673	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547033	GCA_002312685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/685/GCA_002312685.1_ASM231268v1	-	Chir_D-144_assistant
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10312	39.4	-	CLHJ01	76	2343	2112	3/21/15	3/10/17	Contig	SC	SAMEA1025929	GCA_001153485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/485/GCA_001153485.1_6925_5_16	-	SMRU2176
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.50875	50.7	-	JSPT01	104	5878	5430	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801890	GCA_000779935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/935/GCA_000779935.1_ASM77993v1	25373147	blood-10-1610
Mycobacterium tuberculosis TB_RSA93	1422009	PRJNA228087	228087	Terrabacteria group	Actinobacteria	4.39981	65.6	-	JKTZ01	11	4278	4116	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403534	GCA_000675175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/175/GCA_000675175.1_Myco_tube_TB_RSA93_V1	-	TB_RSA93
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.91636	37.9	-	MTFI01	16	2958	2856	5/11/17	5/23/17	Scaffold	FDA	SAMN02991377	GCA_002132195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/195/GCA_002132195.1_LS985.fasta	28464038	MOD1_LS985
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.75326	52.1	-	CJQU01	44	4928	4552	3/21/15	2/27/17	Contig	SC	SAMEA1572785	GCA_001109205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/205/GCA_001109205.1_8490_6_67	-	MDUST67
Staphylococcus aureus M0134	1388083	PRJNA216252	216252	Terrabacteria group	Firmicutes	2.88412	32.9	-	JBYN01	42	3029	2844	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325207	GCA_000552565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/565/GCA_000552565.1_Stap_aure_M0134_V1	-	M0134
Staphylococcus aureus M0135	1388084	PRJNA216253	216253	Terrabacteria group	Firmicutes	2.8854	32.9	-	JBYO01	70	3063	2872	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325208	GCA_000552585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/585/GCA_000552585.1_Stap_aure_M0135_V1	-	M0135
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72484	52.1	-	CJJK01	42	4900	4531	3/21/15	2/27/17	Contig	SC	SAMEA1930193	GCA_001109225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/225/GCA_001109225.1_10592_2_45	-	E97-2364
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	3.03569	37.8	-	MTDN01	18	3134	3042	5/11/17	5/23/17	Scaffold	FDA	SAMN03013659	GCA_002132205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/205/GCA_002132205.1_ASM213220v1	28464038	PNUSAL000904
Mycobacterium tuberculosis TB_RSA94	1422010	PRJNA228088	228088	Terrabacteria group	Actinobacteria	4.41218	65.5	-	JKTY01	5	4285	4118	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403535	GCA_000675195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/195/GCA_000675195.1_Myco_tube_TB_RSA94_V1	-	TB_RSA94
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.87397	50.8	-	JSMI01	86	5027	4686	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801990	GCA_000779955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/955/GCA_000779955.1_ASM77995v1	25373147	upec-173
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08341	39.7	-	CLIV01	62	2297	2086	3/21/15	3/10/17	Contig	SC	SAMEA1028635	GCA_001153525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/525/GCA_001153525.1_6925_7_11	-	SMRU2507
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.31508	66.5	-	MWYM01	25	6007	5844	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547023	GCA_002312695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/695/GCA_002312695.1_ASM231269v1	-	403
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.79851	39	-	LZWH01	109	3631	3498	6/17/16	3/20/17	Contig	JCVI	SAMN05238657	GCA_001668515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/668/515/GCA_001668515.1_ASM166851v1	-	ABUH721
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.46379	57.2	-	NDEP01	79	5507	5228	6/8/17	6/10/17	Contig	JCVI	SAMN06218104	GCA_002182205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/205/GCA_002182205.1_ASM218220v1	-	42364
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.65517	57.1	-	NDER01	133	5824	5565	6/8/17	6/10/17	Contig	JCVI	SAMN06218102	GCA_002182215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/215/GCA_002182215.1_ASM218221v1	-	42807
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.86802	38.8	-	LZXR01	142	3746	3594	6/17/16	3/20/17	Contig	JCVI	SAMN05238717	GCA_001668535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/668/535/GCA_001668535.1_ASM166853v1	-	ABUH744
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.39773	66.4	-	MWYN01	30	6072	5908	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547022	GCA_002312705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/705/GCA_002312705.1_ASM231270v1	-	VD609
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.15799	39.6	-	CROD01	55	2307	2016	3/23/15	3/10/17	Contig	SC	SAMEA1025144	GCA_001153545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/545/GCA_001153545.1_6755_5_16	-	SMRU1168
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.50417	50.4	-	JSPS01	154	5848	5356	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801891	GCA_000779975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/975/GCA_000779975.1_ASM77997v1	25373147	blood-10-180
Mycobacterium tuberculosis TB_RSA95	1422011	PRJNA228089	228089	Terrabacteria group	Actinobacteria	4.53249	64.9	-	JKTX01	44	4375	4099	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403536	GCA_000675215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/215/GCA_000675215.1_Myco_tube_TB_RSA95_V1	-	TB_RSA95
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.95126	37.9	-	MTDV01	15	3022	2933	5/11/17	5/23/17	Scaffold	FDA	SAMN03253388	GCA_002132245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/245/GCA_002132245.1_ASM213224v1	28464038	PNUSAL001188
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93541	51.8	-	CJVH01	66	5131	4755	3/21/15	2/27/17	Contig	SC	SAMEA2056652	GCA_001109485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/485/GCA_001109485.1_9870_8_44	-	2007-021515
Staphylococcus aureus M0136	1388085	PRJNA216254	216254	Terrabacteria group	Firmicutes	2.85365	32.8	-	JBYP01	40	3010	2835	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325209	GCA_000552605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/605/GCA_000552605.1_Stap_aure_M0136_V1	-	M0136
Staphylococcus aureus M0137	1388086	PRJNA216255	216255	Terrabacteria group	Firmicutes	2.89085	32.9	-	JBYQ01	72	3064	2880	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325210	GCA_000552625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/625/GCA_000552625.1_Stap_aure_M0137_V1	-	M0137
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93236	51.8	-	CJVC01	61	5118	4737	3/21/15	2/27/17	Contig	SC	SAMEA2056506	GCA_001109645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/645/GCA_001109645.1_9870_8_41	-	01-2011-000112
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.90694	37.9	-	MTDW01	20	2944	2844	5/11/17	5/23/17	Scaffold	FDA	SAMN03253395	GCA_002132255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/255/GCA_002132255.1_ASM213225v1	28464038	PNUSAL001195
Mycobacterium tuberculosis TB_RSA96	1422012	PRJNA228090	228090	Terrabacteria group	Actinobacteria	4.36815	65.5	-	JKTW01	6	4256	4081	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403537	GCA_000675235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/235/GCA_000675235.1_Myco_tube_TB_RSA96_V1	-	TB_RSA96
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.26047	50.4	-	JSMJ01	86	5399	5011	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801989	GCA_000779995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/995/GCA_000779995.1_ASM77999v1	25373147	upec-172
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.1407	39.6	-	CMCV01	39	2379	2144	3/21/15	3/10/17	Contig	SC	SAMEA1029339	GCA_001153565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/565/GCA_001153565.1_7004_8_89	-	SMRU2921
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.6749	66	-	MWYQ01	62	6370	6159	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547019	GCA_002312755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/755/GCA_002312755.1_ASM231275v1	-	297
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.87423	38.8	-	LZXT01	122	3764	3602	6/17/16	3/20/17	Contig	JCVI	SAMN05238691	GCA_001668555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/668/555/GCA_001668555.1_ASM166855v1	-	ABUH756
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.52464	57.1	-	NDEQ01	93	5580	5297	6/8/17	6/10/17	Contig	JCVI	SAMN06218103	GCA_002182235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/235/GCA_002182235.1_ASM218223v1	-	42365
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.45268	57.2	-	NDET01	126	5542	5303	6/8/17	6/10/17	Contig	JCVI	SAMN06218100	GCA_002182245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/245/GCA_002182245.1_ASM218224v1	-	42809
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.78571	39	-	LZXH01	150	3629	3491	6/17/16	3/20/17	Contig	JCVI	SAMN05238707	GCA_001668585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/668/585/GCA_001668585.1_ASM166858v1	-	ABUH801
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.39984	66.4	-	MWYS01	40	6077	5912	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547017	GCA_002312765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/765/GCA_002312765.1_ASM231276v1	-	VD706
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12476	39.6	-	CNVJ02	145	2310	2107	3/23/15	3/11/17	Contig	SC	SAMEA1032630	GCA_001153725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/725/GCA_001153725.2_6999_7_15	-	383739
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.15572	50.6	-	JSPK01	98	5425	5073	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801899	GCA_000780075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/075/GCA_000780075.1_ASM78007v1	25373147	blood-2011-0238
Mycobacterium tuberculosis TB_RSA97	1422013	PRJNA228091	228091	Terrabacteria group	Actinobacteria	4.41107	65.5	-	JKTV01	5	4287	4097	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403538	GCA_000675255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/255/GCA_000675255.1_Myco_tube_TB_RSA97_V1	-	TB_RSA97
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.99648	37.8	-	MTDP01	19	3079	2986	5/11/17	5/23/17	Scaffold	FDA	SAMN03067789	GCA_002132265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/265/GCA_002132265.1_ASM213226v1	28464038	PNUSAL000982
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.8945	51.9	-	CJLK01	51	5094	4720	3/21/15	2/27/17	Contig	SC	SAMEA1930204	GCA_001110425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/425/GCA_001110425.1_10593_2_8	-	04-0339
Staphylococcus aureus M0138	1388087	PRJNA216256	216256	Terrabacteria group	Firmicutes	2.87987	32.9	-	JBYR01	43	3036	2853	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325211	GCA_000552645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/645/GCA_000552645.1_Stap_aure_M0138_V1	-	M0138
Staphylococcus aureus M0141	1388088	PRJNA216257	216257	Terrabacteria group	Firmicutes	2.80852	32.8	-	JBYS01	47	2922	2780	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325212	GCA_000552665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/665/GCA_000552665.1_Stap_aure_M0141_V1	-	M0141
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72398	52	-	CJSY01	43	4888	4529	3/21/15	2/27/17	Contig	SC	SAMEA1903873	GCA_001110605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/605/GCA_001110605.1_9475_6_46	-	1024341
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.9111	37.9	-	MTDJ01	13	2954	2852	5/11/17	5/23/17	Scaffold	FDA	SAMN02990445	GCA_002132305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/305/GCA_002132305.1_ASM213230v1	28464038	MOD1_LS979
Mycobacterium tuberculosis TB_RSA98	1422014	PRJNA228092	228092	Terrabacteria group	Actinobacteria	4.45627	65.5	-	JKTU01	6	4313	4102	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403539	GCA_000675275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/275/GCA_000675275.1_Myco_tube_TB_RSA98_V1	-	TB_RSA98
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.25849	50.6	-	JSMN01	73	5445	5116	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801985	GCA_000780095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/095/GCA_000780095.1_ASM78009v1	25373147	upec-169
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06066	39.5	-	CNPI02	197	2223	2035	3/23/15	3/5/17	Contig	SC	SAMEA1032446	GCA_001153765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/765/GCA_001153765.2_6930_8_15	-	R34-3021
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.39429	66.4	-	MWYO01	39	6087	5902	9/19/17	9/21/17	Contig	Universite Laval	SAMN06547021	GCA_002312795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/795/GCA_002312795.1_ASM231279v1	-	VD171
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.75871	39	-	LZXO01	116	3619	3473	6/17/16	3/20/17	Contig	JCVI	SAMN05238714	GCA_001668645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/668/645/GCA_001668645.1_ASM166864v1	-	ABUH724
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.57251	57.1	-	NDEU01	111	5724	5469	6/8/17	6/10/17	Contig	JCVI	SAMN06218111	GCA_002182285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/285/GCA_002182285.1_ASM218228v1	-	45710
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.68932	57.1	-	NDEN01	119	5832	5573	6/8/17	6/11/17	Contig	JCVI	SAMN06218106	GCA_002182305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/305/GCA_002182305.1_ASM218230v1	-	42362
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.86501	38.8	-	LZTT01	112	3751	3599	6/17/16	3/20/17	Contig	JCVI	SAMN05238675	GCA_001668755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/668/755/GCA_001668755.1_ASM166875v1	-	ABUH720
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.48022	66.3	-	NQYY01	95	6192	6049	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504868	GCA_002325925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/925/GCA_002325925.1_ASM232592v1	-	W5a-2
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.26321	39.7	-	CMIQ01	70	2490	2259	3/23/15	3/11/17	Contig	SC	SAMEA1029203	GCA_001153905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/905/GCA_001153905.1_7038_7_16	-	SMRU3016
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.388	50.4	-	JSMO01	92	5647	5266	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801982	GCA_000780115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/115/GCA_000780115.1_ASM78011v1	25373147	upec-166
Mycobacterium tuberculosis TB_RSA99	1422015	PRJNA228093	228093	Terrabacteria group	Actinobacteria	4.47216	65.4	-	JKTT01	19	4320	4092	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403540	GCA_000675295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/295/GCA_000675295.1_Myco_tube_TB_RSA99_V1	-	TB_RSA99
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.9102	37.9	-	MTDM01	14	2949	2846	5/11/17	5/23/17	Scaffold	FDA	SAMN02990452	GCA_002132335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/335/GCA_002132335.1_ASM213233v1	28464038	MOD1_LS992
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.97948	52.1	-	CQHF01	52	5161	4882	3/22/15	2/27/17	Contig	SC	SAMEA1568467	GCA_001110745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/745/GCA_001110745.1_8490_2_69	-	CH26
Staphylococcus aureus M0142	1388089	PRJNA216258	216258	Terrabacteria group	Firmicutes	2.85512	32.8	-	JBYT01	47	3002	2822	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325213	GCA_000552685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/685/GCA_000552685.1_Stap_aure_M0142_V1	-	M0142
Staphylococcus aureus M0143	1388090	PRJNA216259	216259	Terrabacteria group	Firmicutes	2.87769	32.8	-	JBYU01	46	3030	2853	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325214	GCA_000552705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/705/GCA_000552705.1_Stap_aure_M0143_V1	-	M0143
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72753	52	-	CJUS01	62	4891	4512	3/21/15	2/27/17	Contig	SC	SAMEA2055642	GCA_001111185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/185/GCA_001111185.1_9870_8_30	-	2001-100510
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.95379	37.8	-	MTFA01	21	3012	2916	5/11/17	5/23/17	Scaffold	FDA	SAMN03299420	GCA_002132365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/365/GCA_002132365.1_ASM213236v1	28464038	FDA00008760
Mycobacterium tuberculosis TB_RSA100	1422016	PRJNA228094	228094	Terrabacteria group	Actinobacteria	4.40175	65.6	-	JKTS01	3	4261	4111	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403541	GCA_000675315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/315/GCA_000675315.1_Myco_tube_TB_RSA100_V1	-	TB_RSA100
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.17982	50.7	-	JSMP01	105	5391	5088	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801978	GCA_000780135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/135/GCA_000780135.1_ASM78013v1	25373147	upec-162
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04004	39.7	-	CKHH01	83	2249	1995	3/21/15	3/10/17	Contig	SC	SAMEA1023704	GCA_001153925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/925/GCA_001153925.1_6631_2_15	-	3
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.76519	66.1	-	NQYZ01	242	6566	6386	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504867	GCA_002325945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/945/GCA_002325945.1_ASM232594v1	-	W1j
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.86618	38.8	-	LZTX01	114	3753	3604	6/17/16	3/20/17	Contig	JCVI	SAMN05238679	GCA_001668765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/668/765/GCA_001668765.1_ASM166876v1	-	ABUH713
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.47405	57.3	-	NDES01	107	5595	5335	6/8/17	6/10/17	Contig	JCVI	SAMN06218101	GCA_002182325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/325/GCA_002182325.1_ASM218232v1	-	42808
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.90875	57	-	NDEW01	196	6086	5780	6/8/17	6/10/17	Contig	JCVI	SAMN06218109	GCA_002182525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/525/GCA_002182525.1_ASM218252v1	-	45712
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.86891	38.8	-	LZVB01	124	3758	3603	6/17/16	3/20/17	Contig	JCVI	SAMN05238598	GCA_001668775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/668/775/GCA_001668775.1_ASM166877v1	-	ABUH750
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.69362	65.3	-	NQZA01	631	6684	6528	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504866	GCA_002325955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/955/GCA_002325955.1_ASM232595v1	-	W1g
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.06155	39.7	-	CMNI01	59	2263	2050	3/23/15	3/10/17	Contig	SC	SAMEA1029210	GCA_001153965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/965/GCA_001153965.1_7092_6_22	-	SMRU3118
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.19666	50.4	-	JSMQ01	76	5312	4987	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801977	GCA_000780155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/155/GCA_000780155.1_ASM78015v1	25373147	upec-161
Mycobacterium tuberculosis TB_RSA101	1422017	PRJNA228095	228095	Terrabacteria group	Actinobacteria	4.43382	65.5	-	JKTR01	23	4280	4105	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403542	GCA_000675335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/335/GCA_000675335.1_Myco_tube_TB_RSA101_V1	-	TB_RSA101
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.91049	37.9	-	MTFN01	13	2950	2852	5/11/17	5/23/17	Scaffold	FDA	SAMN02990456	GCA_002132385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/385/GCA_002132385.1_LS1010.fasta	28464038	MOD1_LS1010
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72373	52	-	CJUK01	44	4879	4518	3/21/15	2/27/17	Contig	SC	SAMEA2055637	GCA_001111305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/305/GCA_001111305.1_9870_8_15	-	2009-006046
Staphylococcus aureus M0145	1388091	PRJNA216260	216260	Terrabacteria group	Firmicutes	2.86348	32.8	-	JBYV01	48	3004	2841	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325215	GCA_000552725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/725/GCA_000552725.1_Stap_aure_M0145_V1	-	M0145
Staphylococcus aureus M0146	1388092	PRJNA216261	216261	Terrabacteria group	Firmicutes	2.91157	32.9	-	JBYW01	70	3115	2928	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325216	GCA_000552745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/745/GCA_000552745.1_Stap_aure_M0146_V1	-	M0146
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.53549	52.2	-	CJKJ01	40	4661	4310	3/21/15	2/27/17	Contig	SC	SAMEA1930179	GCA_001111385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/385/GCA_001111385.1_10593_2_22	-	E01-1811
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.91402	37.9	-	MTFH01	15	2951	2853	5/11/17	5/23/17	Scaffold	FDA	SAMN02991390	GCA_002132435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/435/GCA_002132435.1_LS1005.fasta	28464038	MOD1_LS1005
Mycobacterium tuberculosis TB_RSA102	1422018	PRJNA228096	228096	Terrabacteria group	Actinobacteria	4.41976	65.5	-	JKTQ01	7	4306	4125	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403543	GCA_000675355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/355/GCA_000675355.1_Myco_tube_TB_RSA102_V1	-	TB_RSA102
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.18569	50.5	-	JSMR01	97	5425	5076	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801974	GCA_000780175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/175/GCA_000780175.1_ASM78017v1	25373147	upec-159
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12735	39.5	-	CQVX01	41	2344	2118	3/23/15	3/11/17	Contig	SC	SAMEA1025575	GCA_001154005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/005/GCA_001154005.1_6710_8_20	-	SMRU1412
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.91295	65.7	-	NQZB01	228	6749	6577	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504865	GCA_002325965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/965/GCA_002325965.1_ASM232596v1	-	W1d
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.93919	38.8	-	LZXW01	126	3840	3689	6/17/16	3/20/17	Contig	JCVI	SAMN05238694	GCA_001668815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/668/815/GCA_001668815.1_ASM166881v1	-	ABUH738
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	6.09735	56.6	-	NDEE01	133	6262	5997	6/8/17	6/10/17	Contig	JCVI	SAMN06218056	GCA_002182535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/535/GCA_002182535.1_ASM218253v1	-	42186
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.48148	57.2	-	NDEI01	98	5587	5285	6/8/17	6/10/17	Contig	JCVI	SAMN06218051	GCA_002182575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/575/GCA_002182575.1_ASM218257v1	-	42195
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.79801	39	-	LZVH01	108	3638	3500	6/17/16	3/20/17	Contig	JCVI	SAMN05238604	GCA_001668835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/668/835/GCA_001668835.1_ASM166883v1	-	ABUH731
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.44988	66.4	-	NQZD01	100	6160	6016	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504863	GCA_002325985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/325/985/GCA_002325985.1_ASM232598v1	-	U5b-2
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.99797	39.7	-	COCS02	166	2137	1955	3/22/15	3/5/17	Contig	SC	SAMEA1463166	GCA_001154065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/065/GCA_001154065.2_7622_3_80	-	GL3019
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.95424	50.5	-	JSMS01	61	5039	4747	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801973	GCA_000780195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/195/GCA_000780195.1_ASM78019v1	25373147	upec-158
Mycobacterium tuberculosis TB_RSA103	1422019	PRJNA228097	228097	Terrabacteria group	Actinobacteria	4.43927	65.5	-	JKTP01	7	4310	4124	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403544	GCA_000675375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/375/GCA_000675375.1_Myco_tube_TB_RSA103_V1	-	TB_RSA103
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.95723	37.8	-	MTDO01	19	3013	2922	5/11/17	5/23/17	Scaffold	FDA	SAMN03067780	GCA_002132465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/465/GCA_002132465.1_ASM213246v1	28464038	PNUSAL000972
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73312	52	-	CJZG01	45	4896	4537	3/21/15	2/27/17	Contig	SC	SAMEA2059523	GCA_001111685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/685/GCA_001111685.1_9953_5_91	-	LNT705
Staphylococcus aureus M0147	1388093	PRJNA216262	216262	Terrabacteria group	Firmicutes	2.8664	32.8	-	JBYX01	38	3027	2856	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325217	GCA_000552765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/765/GCA_000552765.1_Stap_aure_M0147_V1	-	M0147
Staphylococcus aureus M0148	1388094	PRJNA216263	216263	Terrabacteria group	Firmicutes	2.84192	32.8	-	JBYY01	30	2972	2801	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325218	GCA_000552785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/785/GCA_000552785.1_Stap_aure_M0148_V1	-	M0148
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.94907	51.8	-	CIUW01	71	5146	4764	3/21/15	2/27/17	Contig	SC	SAMEA2067737	GCA_001111825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/825/GCA_001111825.1_10209_5_15	-	2007-023117
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.90818	37.9	-	MTDQ01	23	2940	2847	5/11/17	5/23/17	Scaffold	FDA	SAMN03253354	GCA_002132475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/475/GCA_002132475.1_ASM213247v1	28464038	PNUSAL001151
Mycobacterium tuberculosis TB_RSA104	1422020	PRJNA228098	228098	Terrabacteria group	Actinobacteria	4.40163	65.6	-	JKTO01	18	4274	4111	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403545	GCA_000675395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/395/GCA_000675395.1_Myco_tube_TB_RSA104_V1	-	TB_RSA104
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.21551	50.5	-	JSMT01	108	5482	5149	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801972	GCA_000780215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/215/GCA_000780215.1_ASM78021v1	25373147	upec-157
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.06023	39.9	-	CKNU01	39	2251	2015	3/21/15	3/10/17	Contig	SC	SAMEA1023694	GCA_001154085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/085/GCA_001154085.1_6664_1_6	-	3
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.37926	66.5	-	NQZE01	68	6059	5920	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504862	GCA_002326025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/025/GCA_002326025.1_ASM232602v1	-	U5a-2
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.9561	38.9	-	LZTP01	166	3858	3697	6/17/16	3/20/17	Contig	JCVI	SAMN05238648	GCA_001668855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/668/855/GCA_001668855.1_ASM166885v1	-	ABUH782
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.67842	57.2	-	NDEX01	131	5788	5543	6/8/17	6/10/17	Contig	JCVI	SAMN06218025	GCA_002184115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/115/GCA_002184115.1_ASM218411v1	-	39387
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.97515	56.6	-	NDEV01	140	6112	5826	6/8/17	6/12/17	Contig	JCVI	SAMN06218110	GCA_002184225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/225/GCA_002184225.1_ASM218422v1	-	45711
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.87187	38.9	-	LZVK01	123	3749	3594	6/17/16	3/20/17	Contig	JCVI	SAMN05238607	GCA_001668865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/668/865/GCA_001668865.1_ASM166886v1	-	ABUH695
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.75001	66.1	-	NQZF01	80	6489	6326	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504861	GCA_002326045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/045/GCA_002326045.1_ASM232604v1	-	U1o-2
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05062	39.7	-	CLTO01	66	2246	1998	3/21/15	3/11/17	Contig	SC	SAMEA1028646	GCA_001154105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/105/GCA_001154105.1_6972_5_12	-	SMRU2628
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.15999	50.5	-	JSMU01	83	5301	4961	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801971	GCA_000780235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/235/GCA_000780235.1_ASM78023v1	25373147	upec-156
Mycobacterium tuberculosis TB_RSA105	1422021	PRJNA228099	228099	Terrabacteria group	Actinobacteria	4.40528	65.5	-	JKTN01	5	4271	4110	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403546	GCA_000675415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/415/GCA_000675415.1_Myco_tube_TB_RSA105_V1	-	TB_RSA105
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.94586	37.9	-	MTDS01	14	3011	2927	5/11/17	5/23/17	Scaffold	FDA	SAMN03253380	GCA_002132505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/505/GCA_002132505.1_ASM213250v1	28464038	PNUSAL001180
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73503	52	-	CJSX01	44	4891	4535	3/21/15	2/27/17	Contig	SC	SAMEA1903865	GCA_001112065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/065/GCA_001112065.1_9475_6_42	-	1017142
Staphylococcus aureus M0149	1388095	PRJNA216264	216264	Terrabacteria group	Firmicutes	2.84771	32.8	-	JBYZ01	39	3004	2827	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325219	GCA_000552805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/805/GCA_000552805.1_Stap_aure_M0149_V1	-	M0149
Staphylococcus aureus M0153	1388096	PRJNA216265	216265	Terrabacteria group	Firmicutes	2.86748	32.9	-	JBZA01	45	3020	2835	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325220	GCA_000552825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/825/GCA_000552825.1_Stap_aure_M0153_V1	-	M0153
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93463	51.8	-	CJUP01	62	5129	4747	3/21/15	2/27/17	Contig	SC	SAMEA2058234	GCA_001112225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/225/GCA_001112225.1_9870_8_25	-	2010-006551
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.90906	38	-	MTDR01	17	2958	2871	5/11/17	5/23/17	Scaffold	FDA	SAMN03253377	GCA_002132515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/515/GCA_002132515.1_ASM213251v1	28464038	PNUSAL001177
Mycobacterium tuberculosis TB_RSA106	1422022	PRJNA228100	228100	Terrabacteria group	Actinobacteria	4.42003	65.5	-	JKTM01	6	4294	4127	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403547	GCA_000675435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/435/GCA_000675435.1_Myco_tube_TB_RSA106_V1	-	TB_RSA106
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.4911	50.9	-	JSPH01	97	5785	5369	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801902	GCA_000780255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/255/GCA_000780255.1_ASM78025v1	25373147	blood-90145
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12493	39.6	-	CRRW01	47	2348	2112	3/23/15	3/4/17	Contig	SC	SAMEA1025201	GCA_001154305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/305/GCA_001154305.1_6805_2_1	-	SMRU1417
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.74874	66.1	-	NQZH01	83	6491	6329	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504859	GCA_002326055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/055/GCA_002326055.1_ASM232605v1	-	U1i
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	4.00515	38.7	-	LZUG01	155	3909	3707	6/17/16	3/20/17	Contig	JCVI	SAMN05238688	GCA_001668875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/668/875/GCA_001668875.1_ASM166887v1	-	ABUH792
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.39737	57.3	-	NEYJ01	90	5515	5298	6/9/17	6/12/17	Contig	JCVI	SAMN06812664	GCA_002184395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/395/GCA_002184395.1_ASM218439v1	-	ARLG-2984
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.60901	57.2	-	NEYK01	135	5732	5473	6/9/17	6/12/17	Contig	JCVI	SAMN06812665	GCA_002184415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/415/GCA_002184415.1_ASM218441v1	-	ARLG-2983
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.86255	38.8	-	LZUQ01	169	3744	3594	6/17/16	3/20/17	Contig	JCVI	SAMN05238696	GCA_001668915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/668/915/GCA_001668915.1_ASM166891v1	-	ABUH767
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.39142	66.5	-	NQZJ01	72	6096	5972	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504857	GCA_002326085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/085/GCA_002326085.1_ASM232608v1	-	S25b-2
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06265	39.5	-	CNOR02	147	2224	2029	3/23/15	3/11/17	Contig	SC	SAMEA1032729	GCA_001154485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/485/GCA_001154485.2_6925_2_95	-	R34-3077
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.12907	50.6	-	JSPR01	74	5320	4988	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801892	GCA_000780275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/275/GCA_000780275.1_ASM78027v1	25373147	blood-11-0031
Mycobacterium tuberculosis TB_RSA107	1422023	PRJNA228101	228101	Terrabacteria group	Actinobacteria	4.45689	65.3	-	JKTL01	21	4339	4109	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403548	GCA_000675455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/455/GCA_000675455.1_Myco_tube_TB_RSA107_V1	-	TB_RSA107
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.90853	37.9	-	MTDU01	29	2937	2844	5/11/17	5/23/17	Scaffold	FDA	SAMN03253386	GCA_002132545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/545/GCA_002132545.1_ASM213254v1	28464038	PNUSAL001186
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93433	51.8	-	CIUR01	51	5134	4747	3/21/15	2/27/17	Contig	SC	SAMEA2067736	GCA_001112305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/305/GCA_001112305.1_10209_5_12	-	2007-011815
Staphylococcus aureus M0155	1388097	PRJNA216266	216266	Terrabacteria group	Firmicutes	2.88449	32.8	-	JBZB01	53	3028	2874	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325221	GCA_000552845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/845/GCA_000552845.1_Stap_aure_M0155_V1	-	M0155
Staphylococcus aureus M0156	1388098	PRJNA216267	216267	Terrabacteria group	Firmicutes	2.91634	32.8	-	JBZC01	60	3117	2941	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325222	GCA_000552865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/865/GCA_000552865.1_Stap_aure_M0156_V1	-	M0156
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.96152	51.9	-	CJON01	64	5158	4756	3/21/15	2/27/17	Contig	SC	SAMEA1406332	GCA_001112345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/345/GCA_001112345.1_7468_7_94	-	IB5384
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.94985	37.9	-	MTDT01	14	3020	2934	5/11/17	5/23/17	Scaffold	FDA	SAMN03253382	GCA_002132565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/565/GCA_002132565.1_ASM213256v1	28464038	PNUSAL001182
Mycobacterium tuberculosis TB_RSA108	1422024	PRJNA228102	228102	Terrabacteria group	Actinobacteria	4.40855	65.6	-	JKTK01	1	4277	4108	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403549	GCA_000675475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/475/GCA_000675475.1_Myco_tube_TB_RSA108_V1	-	TB_RSA108
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.88225	50.6	-	JSMV01	172	6265	5850	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801970	GCA_000780295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/295/GCA_000780295.1_ASM78029v1	25373147	upec-155
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	1.99602	39.9	-	CRFW01	72	2181	1910	3/23/15	3/6/17	Contig	SC	SAMEA1025400	GCA_001154565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/565/GCA_001154565.1_6736_5_11	-	SMRU1235
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.41627	66.4	-	NQYW01	158	6186	6046	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504870	GCA_002326095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/095/GCA_002326095.1_ASM232609v1	-	W21b-2
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.86019	38.8	-	LZUS01	174	3745	3590	6/17/16	3/20/17	Contig	JCVI	SAMN05238698	GCA_001668935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/668/935/GCA_001668935.1_ASM166893v1	-	ABUH775
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.54327	57.1	-	NEYI01	80	5648	5385	6/9/17	6/12/17	Contig	JCVI	SAMN06812663	GCA_002184485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/485/GCA_002184485.1_ASM218448v1	-	ARLG-2985
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.61573	57.2	-	NEYM01	121	5746	5490	6/9/17	6/12/17	Contig	JCVI	SAMN06812667	GCA_002184505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/505/GCA_002184505.1_ASM218450v1	-	ARLG-2981
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.93441	38.8	-	LZUY01	130	3839	3692	6/17/16	3/20/17	Contig	JCVI	SAMN05238595	GCA_001668945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/668/945/GCA_001668945.1_ASM166894v1	-	ABUH736
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.74335	66	-	NQYX01	94	6528	6400	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504869	GCA_002326115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/115/GCA_002326115.1_ASM232611v1	-	W13a-2
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.11424	39.5	-	CNSJ02	175	2280	2069	3/22/15	3/5/17	Contig	SC	SAMEA1032600	GCA_001154605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/605/GCA_001154605.2_6999_3_14	-	44744
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.09107	50.5	-	JSMW01	43	5153	4881	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801969	GCA_000780315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/315/GCA_000780315.1_ASM78031v1	25373147	upec-154
Mycobacterium tuberculosis TB_RSA109	1422025	PRJNA228103	228103	Terrabacteria group	Actinobacteria	4.40489	65.6	-	JKTJ01	2	4281	4117	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403550	GCA_000675495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/495/GCA_000675495.1_Myco_tube_TB_RSA109_V1	-	TB_RSA109
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.90243	37.9	-	MTFC01	22	2941	2841	5/11/17	5/23/17	Scaffold	FDA	SAMN03567988	GCA_002132585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/585/GCA_002132585.1_ASM213258v1	28464038	PNUSAL001411
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70025	52.1	-	CJZE01	42	4854	4498	3/21/15	2/27/17	Contig	SC	SAMEA2056540	GCA_001112445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/445/GCA_001112445.1_9953_5_90	-	LNT670
Staphylococcus aureus M0157	1388099	PRJNA216268	216268	Terrabacteria group	Firmicutes	2.88952	32.8	-	JBZD01	69	3082	2904	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325223	GCA_000552885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/885/GCA_000552885.1_Stap_aure_M0157_V1	-	M0157
Staphylococcus aureus M0159	1388101	PRJNA216270	216270	Terrabacteria group	Firmicutes	2.93089	32.8	-	JBZE01	60	3089	2897	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325225	GCA_000552905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/905/GCA_000552905.1_Stap_aure_M0159_V1	-	M0159
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93367	51.8	-	CJUR01	54	5131	4752	3/21/15	2/27/17	Contig	SC	SAMEA2055640	GCA_001112665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/665/GCA_001112665.1_9870_8_24	-	2006-011021
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.88467	37.9	-	MTQQ01	36	2915	2811	5/11/17	5/23/17	Scaffold	FDA	SAMN03976210	GCA_002132645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/645/GCA_002132645.1_ASM213264v1	28464038	PNUSAL001598
Mycobacterium tuberculosis TB_RSA110	1422026	PRJNA228104	228104	Terrabacteria group	Actinobacteria	4.41268	65.6	-	JKTI01	8	4290	4122	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403551	GCA_000675515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/515/GCA_000675515.1_Myco_tube_TB_RSA110_V1	-	TB_RSA110
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.15566	50.2	-	JSMX01	106	5262	4909	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801968	GCA_000780335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/335/GCA_000780335.1_ASM78033v1	25373147	upec-153
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.14416	39.6	-	CKTT01	61	2320	2112	3/21/15	3/4/17	Contig	SC	SAMEA1025827	GCA_001154645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/645/GCA_001154645.1_6823_2_11	-	SMRU1883
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.74658	65.9	-	NQZC01	72	6495	6357	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504864	GCA_002326125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/125/GCA_002326125.1_ASM232612v1	-	W1c
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.83186	38.9	-	LZVY01	174	3714	3556	6/17/16	3/20/17	Contig	JCVI	SAMN05238573	GCA_001668955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/668/955/GCA_001668955.1_ASM166895v1	-	ABUH813
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.68684	57	-	NEYL01	136	5840	5583	6/9/17	6/12/17	Contig	JCVI	SAMN06812666	GCA_002184515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/515/GCA_002184515.1_ASM218451v1	-	ARLG-2982
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.58115	57.2	-	NEYP01	123	5730	5479	6/9/17	6/12/17	Contig	JCVI	SAMN06812670	GCA_002184525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/525/GCA_002184525.1_ASM218452v1	-	ARLG-2978
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.87417	38.9	-	LZWE01	122	3755	3605	6/17/16	3/20/17	Contig	JCVI	SAMN05238654	GCA_001668995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/668/995/GCA_001668995.1_ASM166899v1	-	ABUH716
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.80104	66.2	-	NQZG01	101	6599	6442	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504860	GCA_002326165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/165/GCA_002326165.1_ASM232616v1	-	U1j-3
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.04093	39.7	-	CMNA01	50	2230	2003	3/22/15	3/4/17	Contig	SC	SAMEA1029409	GCA_001154665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/665/GCA_001154665.1_7092_6_19	-	SMRU3115
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.85126	50.8	-	JSMY01	102	5030	4670	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801966	GCA_000780355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/355/GCA_000780355.1_ASM78035v1	25373147	upec-151
Mycobacterium tuberculosis TB_RSA111	1422027	PRJNA228105	228105	Terrabacteria group	Actinobacteria	4.42418	65.5	-	JKTH01	4	4298	4126	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403552	GCA_000675535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/535/GCA_000675535.1_Myco_tube_TB_RSA111_V1	-	TB_RSA111
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.93502	37.9	-	MTQR01	25	2989	2887	5/11/17	5/23/17	Scaffold	FDA	SAMN03976214	GCA_002132655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/655/GCA_002132655.1_ASM213265v1	28464038	PNUSAL001602
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72372	52	-	CJOX01	47	4883	4535	3/21/15	2/27/17	Contig	SC	SAMEA1572831	GCA_001112885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/885/GCA_001112885.1_8447_8_24	-	MDUST96
Staphylococcus aureus M0160	1388102	PRJNA216271	216271	Terrabacteria group	Firmicutes	2.86816	32.8	-	JBZF01	46	3028	2867	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325226	GCA_000552925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/925/GCA_000552925.1_Stap_aure_M0160_V1	-	M0160
Staphylococcus aureus M0161	1388103	PRJNA216272	216272	Terrabacteria group	Firmicutes	2.86244	32.8	-	JBZG01	47	3027	2866	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325227	GCA_000552945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/945/GCA_000552945.1_Stap_aure_M0161_V1	-	M0161
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.57372	52.1	-	CJXV01	42	4709	4370	3/21/15	2/27/17	Contig	SC	SAMEA2056367	GCA_001113145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/145/GCA_001113145.1_9953_5_48	-	A377
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.88872	37.9	-	MTQT01	33	2921	2822	5/11/17	5/23/17	Scaffold	FDA	SAMN04102322	GCA_002132685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/685/GCA_002132685.1_ASM213268v1	28464038	PNUSAL001751
Mycobacterium tuberculosis TB_RSA113	1422029	PRJNA228107	228107	Terrabacteria group	Actinobacteria	4.46258	65.2	-	JKTG01	19	4328	4103	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403554	GCA_000675555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/555/GCA_000675555.1_Myco_tube_TB_RSA113_V1	-	TB_RSA113
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.36094	50.7	-	JSPD01	125	5693	5254	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801906	GCA_000780375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/375/GCA_000780375.1_ASM78037v1	25373147	blood-B-11-184
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05817	39.7	-	CLXQ01	60	2294	2075	3/21/15	3/4/17	Contig	SC	SAMEA1028973	GCA_001154705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/705/GCA_001154705.1_6983_6_31	-	SMRU2335
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.46386	66.4	-	NQZI01	226	6260	6120	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504858	GCA_002326185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/185/GCA_002326185.1_ASM232618v1	-	S30a
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.97799	39	-	LZWG01	122	3871	3725	6/17/16	3/20/17	Contig	JCVI	SAMN05238656	GCA_001669005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/005/GCA_001669005.1_ASM166900v1	-	ABUH719
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.61865	57.2	-	NEZC01	124	5762	5514	6/9/17	6/12/17	Contig	JCVI	SAMN06812635	GCA_002184705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/705/GCA_002184705.1_ASM218470v1	-	ARLG-2956
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.37564	57.4	-	NEZE01	88	5485	5267	6/9/17	6/12/17	Contig	JCVI	SAMN06812637	GCA_002184715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/715/GCA_002184715.1_ASM218471v1	-	ARLG-2951
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.80645	38.8	-	LZWM01	171	3703	3552	6/17/16	3/20/17	Contig	JCVI	SAMN05238662	GCA_001669025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/025/GCA_001669025.1_ASM166902v1	-	ABUH770
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.33112	66.4	-	NQZL01	62	6017	5890	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504855	GCA_002326195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/195/GCA_002326195.1_ASM232619v1	-	S20b
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.06384	39.6	-	CRUX01	55	2250	2008	3/22/15	3/15/17	Contig	SC	SAMEA1025433	GCA_001154745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/745/GCA_001154745.1_6805_6_21	-	SMRU1725
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.17604	50.8	-	JSPP01	87	5400	5019	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801894	GCA_000780395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/395/GCA_000780395.1_ASM78039v1	25373147	blood-11-0067
Mycobacterium tuberculosis TB_RSA114	1422030	PRJNA228108	228108	Terrabacteria group	Actinobacteria	4.4167	65.6	-	JKTF01	29	4335	4137	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403555	GCA_000675575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/575/GCA_000675575.1_Myco_tube_TB_RSA114_V1	-	TB_RSA114
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.95182	37.9	-	MTJK01	23	3009	2914	5/11/17	5/23/17	Scaffold	FDA	SAMN03299419	GCA_002132705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/705/GCA_002132705.1_ASM213270v1	28464038	FDA00008759
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.933	51.8	-	CJWG01	68	5131	4752	3/21/15	2/27/17	Contig	SC	SAMEA2058435	GCA_001113325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/325/GCA_001113325.1_9870_8_82	-	2006-014301
Staphylococcus aureus M0162	1388104	PRJNA216273	216273	Terrabacteria group	Firmicutes	2.89242	32.9	-	JBZH01	54	3047	2867	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325228	GCA_000552965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/965/GCA_000552965.1_Stap_aure_M0162_V1	-	M0162
Staphylococcus aureus M0163	1388105	PRJNA216274	216274	Terrabacteria group	Firmicutes	2.91224	32.8	-	JBZI01	69	3114	2923	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325229	GCA_000552985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/552/985/GCA_000552985.1_Stap_aure_M0163_V1	-	M0163
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73602	52	-	CJUC01	40	4886	4531	3/21/15	2/27/17	Contig	SC	SAMEA1903918	GCA_001113665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/665/GCA_001113665.1_9475_6_92	-	A39483
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.90854	37.9	-	MTQW01	24	2949	2845	5/11/17	5/23/17	Scaffold	FDA	SAMN02317151	GCA_002132715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/715/GCA_002132715.1_ASM213271v1	28464038	PNUSAL000113
Mycobacterium tuberculosis TB_RSA117	1422033	PRJNA228111	228111	Terrabacteria group	Actinobacteria	4.41067	65.6	-	JKTE01	13	4299	4099	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403558	GCA_000675595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/595/GCA_000675595.1_Myco_tube_TB_RSA117_V1	-	TB_RSA117
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.89749	50.6	-	JSMZ01	65	4978	4709	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801965	GCA_000780415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/415/GCA_000780415.1_ASM78041v1	25373147	upec-150
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.02992	39.6	-	CLSH01	49	2241	2024	3/21/15	3/4/17	Contig	SC	SAMEA1028917	GCA_001154805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/805/GCA_001154805.1_6972_3_4	-	SMRU2572
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.36484	66.4	-	NQZN01	116	6102	5950	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504853	GCA_002326205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/205/GCA_002326205.1_ASM232620v1	-	S8b-3
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.8273	39	-	LZWJ01	109	3665	3524	6/17/16	3/20/17	Contig	JCVI	SAMN05238659	GCA_001669035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/035/GCA_001669035.1_ASM166903v1	-	ABUH730
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.40821	57.4	-	NEZN01	58	5419	5184	6/9/17	6/12/17	Contig	JCVI	SAMN06812646	GCA_002184745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/745/GCA_002184745.1_ASM218474v1	-	ARLG-2846
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.39192	57.3	-	NEZO01	94	5525	5285	6/9/17	6/12/17	Contig	JCVI	SAMN06812648	GCA_002184755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/755/GCA_002184755.1_ASM218475v1	-	ARLG-2820
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.93852	39	-	LZWN01	139	3789	3644	6/17/16	3/20/17	Contig	JCVI	SAMN05238663	GCA_001669075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/075/GCA_001669075.1_ASM166907v1	-	ABUH771
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.36653	66.4	-	NQZO01	89	6081	5936	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504852	GCA_002326245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/245/GCA_002326245.1_ASM232624v1	-	S8b-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05319	39.6	-	CNPQ02	152	2214	2021	3/23/15	3/5/17	Contig	SC	SAMEA1032691	GCA_001154905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/905/GCA_001154905.2_6952_4_18	-	483391
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.09081	50.6	-	JSNA01	159	5345	4947	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801964	GCA_000780435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/435/GCA_000780435.1_ASM78043v1	25373147	upec-15
Mycobacterium tuberculosis TB_RSA118	1422034	PRJNA228112	228112	Terrabacteria group	Actinobacteria	4.4036	65.6	-	JKTD01	13	4295	4096	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403559	GCA_000675615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/615/GCA_000675615.1_Myco_tube_TB_RSA118_V1	-	TB_RSA118
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.90891	37.9	-	MTQX01	21	2942	2849	5/11/17	5/23/17	Scaffold	FDA	SAMN04263438	GCA_002132735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/735/GCA_002132735.1_ASM213273v1	28464038	PNUSAL001831
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70137	52.1	-	CIVZ01	47	4846	4499	3/21/15	2/27/17	Contig	SC	SAMEA2067828	GCA_001113765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/765/GCA_001113765.1_10209_5_57	-	UI3260
Staphylococcus aureus M0164	1388106	PRJNA216275	216275	Terrabacteria group	Firmicutes	2.93506	32.9	-	JBZJ01	67	3134	2952	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325230	GCA_000553005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/005/GCA_000553005.1_Stap_aure_M0164_V1	-	M0164
Staphylococcus aureus M0165	1388107	PRJNA216276	216276	Terrabacteria group	Firmicutes	2.89215	32.9	-	JBZK01	78	3063	2878	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325231	GCA_000553025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/025/GCA_000553025.1_Stap_aure_M0165_V1	-	M0165
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93142	51.8	-	CJLU01	55	5132	4747	3/21/15	2/27/17	Contig	SC	SAMEA2143601	GCA_001113945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/945/GCA_001113945.1_10607_1_64	-	2011-008491
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.90844	37.9	-	MTQZ01	24	2941	2847	5/11/17	5/23/17	Scaffold	FDA	SAMN04287730	GCA_002132765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/765/GCA_002132765.1_ASM213276v1	28464038	PNUSAL001827
Mycobacterium tuberculosis TB_RSA119	1422035	PRJNA228113	228113	Terrabacteria group	Actinobacteria	4.40903	65.5	-	JKTC01	10	4293	4093	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403560	GCA_000675635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/635/GCA_000675635.1_Myco_tube_TB_RSA119_V1	-	TB_RSA119
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.23632	50.8	-	JSPO01	94	5498	5097	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801895	GCA_000780455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/455/GCA_000780455.1_ASM78045v1	25373147	blood-11-0068
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.04016	39.6	-	CRMQ01	48	2234	2000	3/22/15	3/10/17	Contig	SC	SAMEA1024995	GCA_001154985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/985/GCA_001154985.1_6755_3_12	-	SMRU876
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.47475	66.3	-	NQZP01	66	6251	6110	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504851	GCA_002326265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/265/GCA_002326265.1_ASM232626v1	-	S1h
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.79207	38.9	-	LZWQ01	167	3653	3498	6/17/16	3/20/17	Contig	JCVI	SAMN05238666	GCA_001669095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/095/GCA_001669095.1_ASM166909v1	-	ABUH781
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.34443	57.3	-	NEZS01	95	5447	5222	6/9/17	6/12/17	Contig	JCVI	SAMN06812652	GCA_002184785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/785/GCA_002184785.1_ASM218478v1	-	ARLG-2794
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.56808	57.2	-	NEZT01	99	5690	5460	6/9/17	6/12/17	Contig	JCVI	SAMN06812653	GCA_002184795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/795/GCA_002184795.1_ASM218479v1	-	ARLG-2791
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.87873	39	-	LZWT01	143	3748	3585	6/17/16	3/20/17	Contig	JCVI	SAMN05238669	GCA_001669105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/105/GCA_001669105.1_ASM166910v1	-	ABUH787
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.47425	66.3	-	NQZQ01	76	6253	6114	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504850	GCA_002326275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/275/GCA_002326275.1_ASM232627v1	-	S1g
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11262	39.5	-	CMQO01	58	2333	2098	3/23/15	3/10/17	Contig	SC	SAMEA2061945	GCA_001155005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/005/GCA_001155005.1_9803_8_2	-	23F
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.11532	50.6	-	JSNB01	127	5459	4942	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801963	GCA_000780475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/475/GCA_000780475.1_ASM78047v1	25373147	upec-149
Mycobacterium tuberculosis TB_RSA120	1422036	PRJNA228114	228114	Terrabacteria group	Actinobacteria	4.42354	65.5	-	JKTB01	5	4301	4105	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403561	GCA_000675655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/655/GCA_000675655.1_Myco_tube_TB_RSA120_V1	-	TB_RSA120
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.94973	37.9	-	MTQS01	24	3010	2915	5/11/17	5/23/17	Scaffold	FDA	SAMN04025317	GCA_002132785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/785/GCA_002132785.1_ASM213278v1	28464038	PNUSAL001652
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3164	204701	Proteobacteria	Gammaproteobacteria	4.93722	51.8	-	CJRD01	48	5143	4754	3/21/15	2/27/17	Contig	SC	SAMEA1572044	GCA_001114305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/305/GCA_001114305.1_8525_3_34	-	Ke455
Staphylococcus aureus M0166	1388108	PRJNA216277	216277	Terrabacteria group	Firmicutes	2.85366	32.8	-	JBZL01	33	2995	2836	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325232	GCA_000553045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/045/GCA_000553045.1_Stap_aure_M0166_V1	-	M0166
Staphylococcus aureus M0168	1388109	PRJNA216278	216278	Terrabacteria group	Firmicutes	2.88826	32.8	-	JBZM01	66	3059	2889	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325233	GCA_000553065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/065/GCA_000553065.1_Stap_aure_M0168_V1	-	M0168
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74251	52.1	-	CJMM01	46	4905	4544	3/21/15	2/27/17	Contig	SC	SAMEA2152253	GCA_001114385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/385/GCA_001114385.1_10607_2_18	-	BKQ2H5
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.95235	37.8	-	MTJE01	17	3013	2917	5/11/17	5/23/17	Scaffold	FDA	SAMN03218402	GCA_002132805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/805/GCA_002132805.1_ASM213280v1	28464038	FDA00008554
Mycobacterium tuberculosis TB_RSA121	1422037	PRJNA228115	228115	Terrabacteria group	Actinobacteria	4.40552	65.6	-	JKTA01	75	4325	4135	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403562	GCA_000675675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/675/GCA_000675675.1_Myco_tube_TB_RSA121_V1	-	TB_RSA121
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.30224	50.8	-	JSNC01	195	5669	5152	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801962	GCA_000780495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/495/GCA_000780495.1_ASM78049v1	25373147	upec-148
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.9845	39.8	-	COAB02	178	2155	1935	3/22/15	3/11/17	Contig	SC	SAMEA1463086	GCA_001155065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/065/GCA_001155065.2_7553_5_96	-	PT8094
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.47266	66.3	-	NQZR01	78	6267	6128	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504848	GCA_002326305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/305/GCA_002326305.1_ASM232630v1	-	S1e
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.87602	39	-	LZWV01	155	3742	3585	6/17/16	3/20/17	Contig	JCVI	SAMN05238671	GCA_001669115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/115/GCA_001669115.1_ASM166911v1	-	ABUH791
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.55943	57.2	-	NEZU01	133	5753	5498	6/9/17	6/12/17	Contig	JCVI	SAMN06812654	GCA_002184825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/825/GCA_002184825.1_ASM218482v1	-	ARLG-2758
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.53991	57.2	-	NEZW01	115	5671	5435	6/9/17	6/12/17	Contig	JCVI	SAMN06812656	GCA_002184835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/835/GCA_002184835.1_ASM218483v1	-	ARLG-2745
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.98968	39	-	LZWW01	125	3885	3735	6/17/16	3/20/17	Contig	JCVI	SAMN05238672	GCA_001669145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/145/GCA_001669145.1_ASM166914v1	-	ABUH793
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.52158	66.4	-	NQZT01	88	6223	6078	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504846	GCA_002326325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/325/GCA_002326325.1_ASM232632v1	-	P28a
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.14556	39.5	-	CMSV01	47	2379	2136	3/23/15	3/10/17	Contig	SC	SAMEA2062398	GCA_001155265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/265/GCA_001155265.1_9803_8_80	-	23F
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.27957	50.7	-	JSND01	131	5556	5148	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801961	GCA_000780535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/535/GCA_000780535.1_ASM78053v1	25373147	upec-147
Mycobacterium tuberculosis TB_RSA122	1422038	PRJNA228117	228117	Terrabacteria group	Actinobacteria	4.41986	65.6	-	JKSZ01	4	4295	4125	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403563	GCA_000675695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/695/GCA_000675695.1_Myco_tube_TB_RSA122_V1	-	TB_RSA122
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.95096	37.8	-	MTJF01	16	3018	2911	5/11/17	5/23/17	Scaffold	FDA	SAMN03218398	GCA_002132815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/815/GCA_002132815.1_ASM213281v1	28464038	FDA00008550
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9387	51.8	-	CJVI01	63	5135	4754	3/21/15	2/27/17	Contig	SC	SAMEA2055649	GCA_001114445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/445/GCA_001114445.1_9870_8_54	-	2009-000374
Staphylococcus aureus M0169	1388110	PRJNA216279	216279	Terrabacteria group	Firmicutes	2.89479	32.9	-	JBZN01	67	3086	2892	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325234	GCA_000553085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/085/GCA_000553085.1_Stap_aure_M0169_V1	-	M0169
Staphylococcus aureus M0170	1388111	PRJNA216280	216280	Terrabacteria group	Firmicutes	2.90381	32.8	-	JBZO01	55	3079	2918	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325235	GCA_000553105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/105/GCA_000553105.1_Stap_aure_M0170_V1	-	M0170
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70097	52.1	-	CJTJ01	44	4863	4512	3/21/15	2/27/17	Contig	SC	SAMEA1903883	GCA_001114985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/985/GCA_001114985.1_9475_6_57	-	1012752
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.95091	37.8	-	MTJG01	17	3016	2916	5/11/17	5/23/17	Scaffold	FDA	SAMN03218401	GCA_002132835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/835/GCA_002132835.1_ASM213283v1	28464038	FDA00008553
Mycobacterium tuberculosis TB_RSA123	1422039	PRJNA228118	228118	Terrabacteria group	Actinobacteria	4.43545	65.5	-	JKSY01	20	4312	4130	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403564	GCA_000675715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/715/GCA_000675715.1_Myco_tube_TB_RSA123_V1	-	TB_RSA123
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.32263	50.7	-	JSNE01	137	5609	5220	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801960	GCA_000780555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/555/GCA_000780555.1_ASM78055v1	25373147	upec-146
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.15171	39.5	-	CRFM01	54	2360	2143	3/23/15	3/10/17	Contig	SC	SAMEA1025452	GCA_001155285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/285/GCA_001155285.1_6736_4_19	-	SMRU1219
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	7.25335	65.6	-	NQZW01	147	7077	6863	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504841	GCA_002326345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/345/GCA_002326345.1_ASM232634v1	-	env396a
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.86522	38.8	-	LZXB01	150	3749	3592	6/17/16	3/20/17	Contig	JCVI	SAMN05238592	GCA_001669175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/175/GCA_001669175.1_ASM166917v1	-	ABUH806
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.65707	57.1	-	NEZY01	132	5813	5549	6/9/17	6/12/17	Contig	JCVI	SAMN06812658	GCA_002184865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/865/GCA_002184865.1_ASM218486v1	-	ARLG-2737
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.52708	57.3	-	NEZZ01	103	5617	5377	6/9/17	6/12/17	Contig	JCVI	SAMN06812659	GCA_002184875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/875/GCA_002184875.1_ASM218487v1	-	ARLG-2727R
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.87247	38.8	-	LZXC01	126	3761	3623	6/17/16	3/20/17	Contig	JCVI	SAMN05238702	GCA_001669185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/185/GCA_001669185.1_ASM166918v1	-	ABUH768
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.78826	66.1	-	NQZX01	105	6540	6388	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504840	GCA_002326355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/355/GCA_002326355.1_ASM232635v1	-	env345
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10219	39.7	-	CKKC01	57	2317	2095	3/21/15	3/11/17	Contig	SC	SAMEA1023976	GCA_001155325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/325/GCA_001155325.1_6631_6_4	-	19F
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.45942	50.6	-	JSNF01	141	5779	5434	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801959	GCA_000780575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/575/GCA_000780575.1_ASM78057v1	25373147	upec-145
Mycobacterium tuberculosis TB_RSA124	1422040	PRJNA228119	228119	Terrabacteria group	Actinobacteria	4.42686	65.4	-	JKSX01	6	4300	4119	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403565	GCA_000675735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/735/GCA_000675735.1_Myco_tube_TB_RSA124_V1	-	TB_RSA124
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.95051	37.8	-	MTJH01	16	3010	2914	5/11/17	5/23/17	Scaffold	FDA	SAMN03218400	GCA_002132865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/865/GCA_002132865.1_ASM213286v1	28464038	FDA00008552
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93177	51.8	-	CJWA01	63	5129	4742	3/21/15	2/27/17	Contig	SC	SAMEA2056661	GCA_001115105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/105/GCA_001115105.1_9870_8_74	-	01-2012-001846
Staphylococcus aureus M0172	1388112	PRJNA216281	216281	Terrabacteria group	Firmicutes	2.87954	32.9	-	JBZP01	40	3029	2843	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325236	GCA_000553125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/125/GCA_000553125.1_Stap_aure_M0172_V1	-	M0172
Staphylococcus aureus M0174	1388113	PRJNA216282	216282	Terrabacteria group	Firmicutes	2.88664	32.9	-	JBZQ01	50	3042	2865	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325237	GCA_000553145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/145/GCA_000553145.1_Stap_aure_M0174_V1	-	M0174
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93584	51.8	-	CJUI01	67	5129	4748	3/21/15	2/27/17	Contig	SC	SAMEA2055636	GCA_001115965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/965/GCA_001115965.1_9870_8_12	-	2009-000892
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.90819	37.9	-	MTQU01	22	2944	2847	5/11/17	5/23/17	Scaffold	FDA	SAMN04147145	GCA_002132885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/885/GCA_002132885.1_ASM213288v1	28464038	PNUSAL001765
Mycobacterium tuberculosis TB_RSA125	1422041	PRJNA228120	228120	Terrabacteria group	Actinobacteria	4.35835	65.6	-	JKSW01	5	4254	4085	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403566	GCA_000675755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/755/GCA_000675755.1_Myco_tube_TB_RSA125_V1	-	TB_RSA125
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.12676	50.7	-	JSNG01	103	5304	4968	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801958	GCA_000780595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/595/GCA_000780595.1_ASM78059v1	25373147	upec-144
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.10424	39.6	-	CODR02	160	2275	2069	3/23/15	3/5/17	Contig	SC	SAMEA1463234	GCA_001155425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/425/GCA_001155425.2_7622_4_29	-	LE4092
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.78418	66	-	NRAA01	131	6517	6336	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504834	GCA_002326365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/365/GCA_002326365.1_ASM232636v1	-	env238
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.86266	38.8	-	LZXD01	165	3753	3590	6/17/16	3/20/17	Contig	JCVI	SAMN05238703	GCA_001669195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/195/GCA_001669195.1_ASM166919v1	-	ABUH785
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.48699	57.3	-	NFAA01	74	5510	5286	6/9/17	6/12/17	Contig	JCVI	SAMN06812660	GCA_002184915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/915/GCA_002184915.1_ASM218491v1	-	ARLG-2725
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.35324	57.5	-	NFAL01	78	5443	5231	6/9/17	6/12/17	Contig	JCVI	SAMN06812629	GCA_002184945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/945/GCA_002184945.1_ASM218494v1	-	ARLG-2570
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.82507	38.9	-	LZXM01	107	3687	3542	6/17/16	3/20/17	Contig	JCVI	SAMN05238712	GCA_001669225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/225/GCA_001669225.1_ASM166922v1	-	ABUH715
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.43571	66.5	-	NRAC01	65	6120	5987	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504831	GCA_002326395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/395/GCA_002326395.1_ASM232639v1	-	env210
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.00222	39.6	-	CLTL01	48	2210	1995	3/21/15	3/10/17	Contig	SC	SAMEA1028826	GCA_001155465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/465/GCA_001155465.1_6972_4_8	-	SMRU2600
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.16973	50.7	-	JSNH01	94	5414	5058	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801957	GCA_000780615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/615/GCA_000780615.1_ASM78061v1	25373147	upec-143
Mycobacterium tuberculosis TB_RSA126	1422042	PRJNA228121	228121	Terrabacteria group	Actinobacteria	4.41369	65.6	-	JKSV01	5	4285	4102	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403567	GCA_000675775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/775/GCA_000675775.1_Myco_tube_TB_RSA126_V1	-	TB_RSA126
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.94981	37.8	-	MTJI01	17	3003	2914	5/11/17	5/23/17	Scaffold	FDA	SAMN03218403	GCA_002132895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/895/GCA_002132895.1_ASM213289v1	28464038	FDA00008555
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.90916	51.9	-	CJLI01	49	5123	4743	3/21/15	2/27/17	Contig	SC	SAMEA1930237	GCA_001116345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/345/GCA_001116345.1_10593_2_77	-	IPCN
Staphylococcus aureus M0175	1388114	PRJNA216283	216283	Terrabacteria group	Firmicutes	2.88355	32.9	-	JBZR01	72	3075	2878	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325238	GCA_000553165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/165/GCA_000553165.1_Stap_aure_M0175_V1	-	M0175
Staphylococcus aureus M0178	1388115	PRJNA216284	216284	Terrabacteria group	Firmicutes	2.92818	32.9	-	JBZS01	78	3111	2933	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325239	GCA_000553185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/185/GCA_000553185.1_Stap_aure_M0178_V1	-	M0178
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93185	51.8	-	CJUO01	54	5136	4750	3/21/15	2/27/17	Contig	SC	SAMEA2056500	GCA_001117125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/125/GCA_001117125.1_9870_8_20	-	2009-012898
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.91094	37.9	-	MTQV01	33	2949	2840	5/11/17	5/23/17	Scaffold	FDA	SAMN04148337	GCA_002132915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/915/GCA_002132915.1_ASM213291v1	28464038	CDPHFDLB-F15M03122-2
Mycobacterium tuberculosis TB_RSA127	1422043	PRJNA228122	228122	Terrabacteria group	Actinobacteria	4.41278	65.5	-	JKSU01	1	4284	4114	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403568	GCA_000675795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/795/GCA_000675795.1_Myco_tube_TB_RSA127_V1	-	TB_RSA127
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.26265	50.7	-	JSNI01	186	5626	5125	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801956	GCA_000780635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/635/GCA_000780635.1_ASM78063v1	25373147	upec-142
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.06034	39.8	-	CMIR01	50	2294	2063	3/23/15	3/10/17	Contig	SC	SAMEA1029177	GCA_001155605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/605/GCA_001155605.1_7038_7_15	-	SMRU3015
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.88731	66	-	NRAE01	123	6672	6459	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504821	GCA_002326425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/425/GCA_002326425.1_ASM232642v1	-	env179
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.83779	38.9	-	LZXN01	111	3693	3554	6/17/16	3/20/17	Contig	JCVI	SAMN05238713	GCA_001669255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/255/GCA_001669255.1_ASM166925v1	-	ABUH717
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.67012	57.1	-	NFAG01	154	5819	5509	6/9/17	6/12/17	Contig	JCVI	SAMN06812624	GCA_002184955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/955/GCA_002184955.1_ASM218495v1	-	ARLG-2696
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.52291	57.1	-	NFAP01	75	5573	5306	6/9/17	6/12/17	Contig	JCVI	SAMN06812589	GCA_002184985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/985/GCA_002184985.1_ASM218498v1	-	ARLG-2543
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.87304	38.8	-	LZXP01	129	3751	3596	6/17/16	3/20/17	Contig	JCVI	SAMN05238715	GCA_001669265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/265/GCA_001669265.1_ASM166926v1	-	ABUH740
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	7.06879	65.8	-	NRAF01	195	6957	6758	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504820	GCA_002326435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/435/GCA_002326435.1_ASM232643v1	-	env172
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09168	39.7	-	CQXD01	139	2309	2106	3/23/15	3/4/17	Contig	SC	SAMEA1024030	GCA_001155845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/845/GCA_001155845.1_6714_8_24	-	SMRU576
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.15294	50.5	-	JSNO01	76	5221	4924	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801950	GCA_000780655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/655/GCA_000780655.1_ASM78065v1	25373147	upec-137
Mycobacterium tuberculosis TB_RSA128	1422044	PRJNA228123	228123	Terrabacteria group	Actinobacteria	4.40528	65.6	-	JKST01	1	4281	4115	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403569	GCA_000675815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/815/GCA_000675815.1_Myco_tube_TB_RSA128_V1	-	TB_RSA128
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.9111	37.9	-	MTRS01	22	2926	2851	5/11/17	5/23/17	Scaffold	FDA	SAMN03462190	GCA_002132945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/945/GCA_002132945.1_ASM213294v1	28464038	CDPHFDLB-F14M01770.86-1
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.95388	51.9	-	CJKH01	53	5156	4776	3/21/15	2/27/17	Contig	SC	SAMEA1930248	GCA_001117145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/145/GCA_001117145.1_10593_2_2	-	72-1258
Staphylococcus aureus M0179	1388116	PRJNA216285	216285	Terrabacteria group	Firmicutes	2.88057	32.9	-	JBZT01	75	3057	2859	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325240	GCA_000553205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/205/GCA_000553205.1_Stap_aure_M0179_V1	-	M0179
Staphylococcus aureus M0181	1388118	PRJNA216287	216287	Terrabacteria group	Firmicutes	2.86765	32.8	-	JBZU01	39	3030	2870	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325242	GCA_000553225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/225/GCA_000553225.1_Stap_aure_M0181_V1	-	M0181
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73087	52.1	-	CJKB01	42	4897	4545	3/21/15	2/27/17	Contig	SC	SAMEA1929458	GCA_001117685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/685/GCA_001117685.1_10592_2_8	-	16637
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.90605	37.9	-	MTRA01	27	2928	2842	5/11/17	5/23/17	Scaffold	FDA	SAMN04287743	GCA_002132955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/955/GCA_002132955.1_ASM213295v1	28464038	PNUSAL001885
Mycobacterium tuberculosis TB_RSA129	1422045	PRJNA228124	228124	Terrabacteria group	Actinobacteria	4.42312	65.6	-	JKSS01	1	4291	4116	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403570	GCA_000675835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/835/GCA_000675835.1_Myco_tube_TB_RSA129_V1	-	TB_RSA129
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.18334	50.5	-	JSNL01	110	5364	4978	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801953	GCA_000780675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/675/GCA_000780675.1_ASM78067v1	25373147	upec-14
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.04194	39.6	-	CLWA01	57	2221	2008	3/21/15	3/4/17	Contig	SC	SAMEA1026261	GCA_001155885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/885/GCA_001155885.1_6983_4_80	-	SMRU2288
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.4192	66.3	-	NRAG01	103	6143	5988	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504818	GCA_002326445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/445/GCA_002326445.1_ASM232644v1	-	env165
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.8595	38.8	-	LZXV01	172	3739	3587	6/17/16	3/20/17	Contig	JCVI	SAMN05238693	GCA_001669295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/295/GCA_001669295.1_ASM166929v1	-	ABUH776
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.53681	57.2	-	NFAV01	139	5697	5452	6/9/17	6/12/17	Contig	JCVI	SAMN06812595	GCA_002184995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/995/GCA_002184995.1_ASM218499v1	-	ARLG-2491
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.46813	57.2	-	NFAY01	87	5583	5378	6/9/17	6/12/17	Contig	JCVI	SAMN06812598	GCA_002185025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/025/GCA_002185025.1_ASM218502v1	-	ARLG-2483
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.73048	39	-	LZXS01	110	3572	3433	6/17/16	3/20/17	Contig	JCVI	SAMN05238690	GCA_001669305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/305/GCA_001669305.1_ASM166930v1	-	ABUH747
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.37404	66.4	-	NRAI01	64	6075	5952	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504816	GCA_002326455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/455/GCA_002326455.1_ASM232645v1	-	env159a
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	1.98473	39.8	-	CPMN01	276	2156	1954	3/23/15	3/4/17	Contig	SC	SAMEA1020675	GCA_001155965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/965/GCA_001155965.1_6237_8_13	-	S-078
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.30083	50.7	-	JSNP01	87	5548	5180	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801949	GCA_000780695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/695/GCA_000780695.1_ASM78069v1	25373147	upec-136
Mycobacterium tuberculosis TB_RSA130	1422046	PRJNA228125	228125	Terrabacteria group	Actinobacteria	4.39031	65.6	-	JKSR01	3	4268	4098	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403571	GCA_000675855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/855/GCA_000675855.1_Myco_tube_TB_RSA130_V1	-	TB_RSA130
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.95042	37.8	-	MTJJ01	16	3015	2914	5/11/17	5/23/17	Scaffold	FDA	SAMN03218399	GCA_002132975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/975/GCA_002132975.1_ASM213297v1	28464038	FDA00008551
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93297	51.8	-	CJMA01	55	5131	4744	3/21/15	2/27/17	Contig	SC	SAMEA2158409	GCA_001117965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/965/GCA_001117965.1_10607_1_70	-	2009-004677
Staphylococcus aureus M0182	1388119	PRJNA216288	216288	Terrabacteria group	Firmicutes	2.86638	32.8	-	JBZV01	24	3013	2845	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325243	GCA_000553245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/245/GCA_000553245.1_Stap_aure_M0182_V1	-	M0182
Staphylococcus aureus M0183	1388120	PRJNA216289	216289	Terrabacteria group	Firmicutes	2.90045	32.8	-	JBZW01	71	3085	2904	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325244	GCA_000553265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/265/GCA_000553265.1_Stap_aure_M0183_V1	-	M0183
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93225	51.8	-	CJLX01	58	5132	4744	3/21/15	2/27/17	Contig	SC	SAMEA1972633	GCA_001118305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/305/GCA_001118305.1_10607_1_67	-	2007-017523
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.90879	37.9	-	MTQY01	22	2945	2844	5/11/17	5/23/17	Scaffold	FDA	SAMN04263439	GCA_002132985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/132/985/GCA_002132985.1_ASM213298v1	28464038	PNUSAL001833
Mycobacterium tuberculosis TB_RSA131	1422047	PRJNA228126	228126	Terrabacteria group	Actinobacteria	4.44215	65.5	-	JKSQ01	1	4308	4109	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403572	GCA_000675875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/875/GCA_000675875.1_Myco_tube_TB_RSA131_V1	-	TB_RSA131
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.20089	50.7	-	JSNJ01	213	5373	4952	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801955	GCA_000780715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/715/GCA_000780715.1_ASM78071v1	25373147	upec-141
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.04122	39.7	-	CLLP01	73	2244	2032	3/21/15	3/4/17	Contig	SC	SAMEA1028623	GCA_001156045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/045/GCA_001156045.1_6938_6_16	-	SMRU2680
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.29982	66.5	-	NRAJ01	73	5985	5848	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504815	GCA_002326505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/505/GCA_002326505.1_ASM232650v1	-	env158
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	4.10342	38.9	-	LZTY01	104	4003	3846	6/17/16	3/20/17	Contig	JCVI	SAMN05238680	GCA_001669355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/355/GCA_001669355.1_ASM166935v1	-	ABUH722
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.94183	56.9	-	NFAZ01	164	6106	5809	6/9/17	6/12/17	Contig	JCVI	SAMN06812599	GCA_002185045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/045/GCA_002185045.1_ASM218504v1	-	ARLG-2480
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.54896	57	-	NFBB01	119	5714	5453	6/9/17	6/12/17	Contig	JCVI	SAMN06812601	GCA_002185055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/055/GCA_002185055.1_ASM218505v1	-	ARLG-2459
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.75271	38.9	-	LZTW01	119	3602	3461	6/17/16	3/20/17	Contig	JCVI	SAMN05238678	GCA_001669365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/365/GCA_001669365.1_ASM166936v1	-	ABUH702
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.34654	66.5	-	NQZK01	139	6066	5929	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504856	GCA_002326515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/515/GCA_002326515.1_ASM232651v1	-	S21a
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.01543	39.8	-	CMIJ01	44	2209	2001	3/23/15	3/4/17	Contig	SC	SAMEA1029299	GCA_001156085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/085/GCA_001156085.1_7038_7_14	-	SMRU3014
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.12979	50.4	-	JSNK01	72	5199	4894	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801954	GCA_000780735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/735/GCA_000780735.1_ASM78073v1	25373147	upec-140
Mycobacterium tuberculosis TB_RSA132	1422048	PRJNA228127	228127	Terrabacteria group	Actinobacteria	4.41683	65.6	-	JKSP01	5	4282	4103	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403573	GCA_000675895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/895/GCA_000675895.1_Myco_tube_TB_RSA132_V1	-	TB_RSA132
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.95265	37.8	-	MTRB01	23	3017	2915	5/11/17	5/23/17	Scaffold	FDA	SAMN04362095	GCA_002133025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/025/GCA_002133025.1_ASM213302v1	28464038	FDA00009738
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74933	52.1	-	CJSI01	44	4921	4553	3/21/15	2/27/17	Contig	SC	SAMEA1903842	GCA_001118345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/345/GCA_001118345.1_9475_6_16	-	1031809
Staphylococcus aureus M0184	1388121	PRJNA216290	216290	Terrabacteria group	Firmicutes	2.87305	32.9	-	JBZX01	19	3006	2838	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325245	GCA_000553285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/285/GCA_000553285.1_Stap_aure_M0184_V1	-	M0184
Staphylococcus aureus M0185	1388122	PRJNA216291	216291	Terrabacteria group	Firmicutes	2.84898	32.8	-	JBZY01	67	3010	2833	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325246	GCA_000553305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/305/GCA_000553305.1_Stap_aure_M0185_V1	-	M0185
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93662	51.8	-	CJVA01	60	5139	4757	3/21/15	2/27/17	Contig	SC	SAMEA2056505	GCA_001119445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/445/GCA_001119445.1_9870_8_38	-	2010-010972
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.95113	37.8	-	MTRC01	24	3019	2910	5/11/17	5/23/17	Scaffold	FDA	SAMN04362096	GCA_002133045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/045/GCA_002133045.1_ASM213304v1	28464038	FDA00009739
Mycobacterium tuberculosis TB_RSA133	1422049	PRJNA228128	228128	Terrabacteria group	Actinobacteria	4.40014	65.6	-	JKSO01	12	4258	4080	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403574	GCA_000675915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/915/GCA_000675915.1_Myco_tube_TB_RSA133_V1	-	TB_RSA133
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.02148	50.6	-	JSNM01	62	5202	4911	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801952	GCA_000780755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/755/GCA_000780755.1_ASM78075v1	25373147	upec-139
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06953	39.7	-	COBJ02	123	2233	2033	3/23/15	3/5/17	Contig	SC	SAMEA1463057	GCA_001156105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/105/GCA_001156105.2_7622_2_47	-	CH2006
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.37552	66.5	-	NQZM01	94	6083	5947	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504854	GCA_002326525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/525/GCA_002326525.1_ASM232652v1	-	S14b
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.98687	39	-	LZUB01	119	3887	3739	6/17/16	3/20/17	Contig	JCVI	SAMN05238683	GCA_001669415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/415/GCA_001669415.1_ASM166941v1	-	ABUH759
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.82598	56.8	-	NFBI01	130	5980	5711	6/9/17	6/12/17	Contig	JCVI	SAMN06812608	GCA_002185075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/075/GCA_002185075.1_ASM218507v1	-	ARLG-2176
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.57913	57.1	-	NFBM01	107	5707	5473	6/9/17	6/12/17	Contig	JCVI	SAMN06812612	GCA_002185105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/105/GCA_002185105.1_ASM218510v1	-	ARLG-2131
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.81848	38.9	-	LZUZ01	113	3672	3530	6/17/16	3/20/17	Contig	JCVI	SAMN05238596	GCA_001669425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/425/GCA_001669425.1_ASM166942v1	-	ABUH746
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.5188	66.4	-	NQZS01	94	6224	6079	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504847	GCA_002326535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/535/GCA_002326535.1_ASM232653v1	-	P28b
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06664	39.6	-	CNVU02	166	2217	2017	3/23/15	3/5/17	Contig	SC	SAMEA1032440	GCA_001156185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/185/GCA_001156185.2_6999_7_9	-	365152
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.20523	50.5	-	JSNN01	88	5356	4976	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801951	GCA_000780775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/775/GCA_000780775.1_ASM78077v1	25373147	upec-138
Mycobacterium tuberculosis TB_RSA134	1422050	PRJNA228129	228129	Terrabacteria group	Actinobacteria	4.43422	65.6	-	JKSN01	28	4320	4100	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403575	GCA_000675935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/935/GCA_000675935.1_Myco_tube_TB_RSA134_V1	-	TB_RSA134
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.95338	37.9	-	MTRD01	22	3012	2913	5/11/17	5/23/17	Scaffold	FDA	SAMN04362097	GCA_002133055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/055/GCA_002133055.1_ASM213305v1	28464038	FDA00009740
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.77106	52.1	-	CJKO01	44	4962	4590	3/21/15	2/27/17	Contig	SC	SAMEA1930196	GCA_001119805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/805/GCA_001119805.1_10593_2_30	-	E02-1739
Staphylococcus aureus M0186	1388123	PRJNA216292	216292	Terrabacteria group	Firmicutes	2.8837	32.8	-	JBZZ01	69	3051	2926	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325247	GCA_000553325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/325/GCA_000553325.1_Stap_aure_M0186_V1	-	M0186
Staphylococcus aureus M0187	1388124	PRJNA216293	216293	Terrabacteria group	Firmicutes	2.8661	32.8	-	JCAA01	48	3015	2829	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325248	GCA_000553345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/345/GCA_000553345.1_Stap_aure_M0187_V1	-	M0187
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69108	52.1	-	CJJS01	52	4849	4489	3/21/15	2/27/17	Contig	SC	SAMEA1930254	GCA_001120005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/005/GCA_001120005.1_10592_2_58	-	Sep-06
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.95084	37.8	-	MTRE01	21	3012	2915	5/11/17	5/23/17	Scaffold	FDA	SAMN04362098	GCA_002133065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/065/GCA_002133065.1_ASM213306v1	28464038	FDA00009741
Mycobacterium tuberculosis TB_RSA135	1422051	PRJNA228130	228130	Terrabacteria group	Actinobacteria	4.4246	65.4	-	JKSM01	18	4289	4091	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403576	GCA_000675955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/955/GCA_000675955.1_Myco_tube_TB_RSA135_V1	-	TB_RSA135
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.31499	50.4	-	JSNQ01	101	5509	5089	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801948	GCA_000780795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/795/GCA_000780795.1_ASM78079v1	25373147	upec-135
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11045	39.5	-	CRPV01	57	2316	2111	3/22/15	3/4/17	Contig	SC	SAMEA1024655	GCA_001156205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/205/GCA_001156205.1_6775_1_9	-	SMRU825
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.9364	65.9	-	NQZV01	128	6730	6517	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504843	GCA_002326585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/585/GCA_002326585.1_ASM232658v1	-	env406b
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.86443	38.8	-	LZVE01	158	3746	3589	6/17/16	3/20/17	Contig	JCVI	SAMN05238601	GCA_001669435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/435/GCA_001669435.1_ASM166943v1	-	ABUH760
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.55238	57.2	-	NFBN01	137	5722	5463	6/9/17	6/12/17	Contig	JCVI	SAMN06812613	GCA_002185125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/125/GCA_002185125.1_ASM218512v1	-	ARLG-2130
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.35417	57.3	-	NFBO01	87	5471	5256	6/9/17	6/12/17	Contig	JCVI	SAMN06812573	GCA_002185135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/135/GCA_002185135.1_ASM218513v1	-	ARLG-2123
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.8589	38.8	-	LZVG01	168	3746	3586	6/17/16	3/20/17	Contig	JCVI	SAMN05238603	GCA_001669455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/455/GCA_001669455.1_ASM166945v1	-	ABUH766
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.3489	66.5	-	NQZY01	82	6016	5884	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504838	GCA_002326595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/595/GCA_002326595.1_ASM232659v1	-	env331b
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.04291	39.6	-	CRHJ01	72	2243	2025	3/23/15	3/10/17	Contig	SC	SAMEA1025298	GCA_001156485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/485/GCA_001156485.1_6736_7_20	-	SMRU1292
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.99381	50.7	-	JSNR01	92	5158	4809	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801947	GCA_000780815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/815/GCA_000780815.1_ASM78081v1	25373147	upec-134
Mycobacterium tuberculosis TB_RSA136	1422052	PRJNA228131	228131	Terrabacteria group	Actinobacteria	4.42629	65.6	-	JKSL01	6	4268	4103	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403577	GCA_000675975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/975/GCA_000675975.1_Myco_tube_TB_RSA136_V1	-	TB_RSA136
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.95337	37.8	-	MTRF01	19	3022	2914	5/11/17	5/23/17	Scaffold	FDA	SAMN04362094	GCA_002133105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/105/GCA_002133105.1_ASM213310v1	28464038	FDA00009737
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93431	51.8	-	CJWJ01	78	5135	4744	3/21/15	2/27/17	Contig	SC	SAMEA1963918	GCA_001120085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/085/GCA_001120085.1_9870_8_85	-	2012-010059
Staphylococcus aureus M0188	1388125	PRJNA216294	216294	Terrabacteria group	Firmicutes	2.89113	32.8	-	JCAB01	69	3067	2895	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325249	GCA_000553365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/365/GCA_000553365.1_Stap_aure_M0188_V1	-	M0188
Staphylococcus aureus M0191	1388126	PRJNA216295	216295	Terrabacteria group	Firmicutes	2.85413	32.8	-	JCAC01	43	3013	2846	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325250	GCA_000553385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/385/GCA_000553385.1_Stap_aure_M0191_V1	-	M0191
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74383	52.1	-	CIUY01	41	4925	4577	3/21/15	2/27/17	Contig	SC	SAMEA2064361	GCA_001120445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/445/GCA_001120445.1_10209_5_25	-	LNT26
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.904	37.9	-	MTRH01	21	2949	2845	5/11/17	5/23/17	Scaffold	FDA	SAMN04372341	GCA_002133125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/125/GCA_002133125.1_ASM213312v1	28464038	PNUSAL001968
Mycobacterium tuberculosis TB_RSA137	1422053	PRJNA228132	228132	Terrabacteria group	Actinobacteria	4.40976	65.6	-	JKSK01	6	4284	4119	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403578	GCA_000675995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/675/995/GCA_000675995.1_Myco_tube_TB_RSA137_V1	-	TB_RSA137
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.31453	50.6	-	JSNS01	190	5563	5093	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801946	GCA_000780835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/835/GCA_000780835.1_ASM78083v1	25373147	upec-133
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.03682	39.7	-	CRNU01	71	2242	2033	3/23/15	3/10/17	Contig	SC	SAMEA1025055	GCA_001156505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/505/GCA_001156505.1_6755_4_8	-	SMRU1136
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.99622	65.8	-	NQZZ01	158	6771	6576	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504835	GCA_002326605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/605/GCA_002326605.1_ASM232660v1	-	env241a
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.87624	38.9	-	LZVL01	122	3752	3601	6/17/16	3/20/17	Contig	JCVI	SAMN05238608	GCA_001669495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/495/GCA_001669495.1_ASM166949v1	-	ABUH698
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.70305	57.1	-	NFBP01	121	5865	5612	6/9/17	6/12/17	Contig	JCVI	SAMN06812574	GCA_002185155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/155/GCA_002185155.1_ASM218515v1	-	ARLG-2122
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.58254	57.2	-	NFBS01	99	5718	5483	6/9/17	6/12/17	Contig	JCVI	SAMN06812577	GCA_002185185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/185/GCA_002185185.1_ASM218518v1	-	ARLG-2082
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.87799	38.9	-	LZVR01	89	3743	3606	6/17/16	3/20/17	Contig	JCVI	SAMN05238615	GCA_001669505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/505/GCA_001669505.1_ASM166950v1	-	ABUH743
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.1553	66.6	-	NRAB01	38	5836	5716	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504833	GCA_002326625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/625/GCA_002326625.1_ASM232662v1	-	env225
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.10117	39.6	-	CMJC01	79	2333	2089	3/22/15	3/10/17	Contig	SC	SAMEA1029325	GCA_001156565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/565/GCA_001156565.1_7038_7_22	-	SMRU3022
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.03911	50.7	-	JSNT01	66	5191	4859	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801945	GCA_000780845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/845/GCA_000780845.1_ASM78084v1	25373147	upec-132
Mycobacterium tuberculosis TB_RSA138	1422054	PRJNA228133	228133	Terrabacteria group	Actinobacteria	4.41073	65.6	-	JKSJ01	7	4292	4126	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403579	GCA_000676015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/015/GCA_000676015.1_Myco_tube_TB_RSA138_V1	-	TB_RSA138
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.89166	37.9	-	MTRG01	25	2925	2831	5/11/17	5/23/17	Scaffold	FDA	SAMN04372563	GCA_002133145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/145/GCA_002133145.1_ASM213314v1	28464038	PNUSAL001937
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74755	52.1	-	CJTW01	49	4913	4549	3/21/15	2/27/17	Contig	SC	SAMEA1903894	GCA_001120605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/605/GCA_001120605.1_9475_6_68	-	1018617
Staphylococcus aureus M0193	1388127	PRJNA216296	216296	Terrabacteria group	Firmicutes	2.89834	32.9	-	JCAD01	69	3083	2893	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325251	GCA_000553405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/405/GCA_000553405.1_Stap_aure_M0193_V1	-	M0193
Staphylococcus aureus M0194	1388128	PRJNA216297	216297	Terrabacteria group	Firmicutes	2.931	32.9	-	JCAE01	36	3092	2908	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325252	GCA_000553425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/425/GCA_000553425.1_Stap_aure_M0194_V1	-	M0194
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71959	52	-	CJGX01	42	4877	4521	3/21/15	2/27/17	Contig	SC	SAMEA2147498	GCA_001121185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/185/GCA_001121185.1_10562_2_3	-	MDUST119
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.94799	37.9	-	MTRI01	31	3018	2929	5/11/17	5/23/17	Scaffold	FDA	SAMN04396067	GCA_002133165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/165/GCA_002133165.1_ASM213316v1	28464038	PNUSAL001981
Mycobacterium tuberculosis TB_RSA139	1422055	PRJNA228134	228134	Terrabacteria group	Actinobacteria	4.40019	65.6	-	JKSI01	37	4297	4121	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403580	GCA_000676035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/035/GCA_000676035.1_Myco_tube_TB_RSA139_V1	-	TB_RSA139
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.02801	50.6	-	JSNU01	74	5233	4931	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801944	GCA_000780875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/875/GCA_000780875.1_ASM78087v1	25373147	upec-131
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05872	39.6	-	CNXT02	165	2228	2022	3/23/15	3/11/17	Contig	SC	SAMEA1463040	GCA_001156645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/645/GCA_001156645.2_7553_4_1	-	ND6110
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.24252	66.5	-	NRAD01	49	5909	5793	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504824	GCA_002326665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/665/GCA_002326665.1_ASM232666v1	-	env193
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.7261	39	-	LZUX01	145	3571	3420	6/17/16	3/20/17	Contig	JCVI	SAMN05238594	GCA_001669525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/525/GCA_001669525.1_ASM166952v1	-	ABUH812
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.54438	57.2	-	NFBW01	130	5712	5459	6/9/17	6/12/17	Contig	JCVI	SAMN06812581	GCA_002185205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/205/GCA_002185205.1_ASM218520v1	-	ARLG-2051
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.60694	57.2	-	NFCD01	119	5775	5523	6/9/17	6/12/17	Contig	JCVI	SAMN06812588	GCA_002185215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/215/GCA_002185215.1_ASM218521v1	-	ARLG-2003
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	4.12933	38.9	-	LZVQ01	93	4045	3880	6/17/16	3/20/17	Contig	JCVI	SAMN05238613	GCA_001669535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/535/GCA_001669535.1_ASM166953v1	-	ABUH735
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.39095	66.5	-	NRAK01	90	6105	5973	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504814	GCA_002326675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/675/GCA_002326675.1_ASM232667v1	-	env146b
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00167	39.7	-	CNQO02	143	2143	1955	3/23/15	3/11/17	Contig	SC	SAMEA1032514	GCA_001156685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/685/GCA_001156685.2_6952_7_3	-	R34-3164
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.81106	50.7	-	JSNV01	66	4901	4626	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801943	GCA_000780895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/895/GCA_000780895.1_ASM78089v1	25373147	upec-130
Mycobacterium tuberculosis TB_RSA140	1422056	PRJNA228135	228135	Terrabacteria group	Actinobacteria	4.405	65.6	-	JKSH01	5	4273	4117	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403581	GCA_000676055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/055/GCA_000676055.1_Myco_tube_TB_RSA140_V1	-	TB_RSA140
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.96843	37.9	-	MTRJ01	17	3054	2970	5/11/17	5/23/17	Scaffold	FDA	SAMN04396071	GCA_002133175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/175/GCA_002133175.1_ASM213317v1	28464038	PNUSAL001985
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2770	204451	Proteobacteria	Gammaproteobacteria	4.85553	52	-	CILR01	51	5055	4678	3/21/15	2/27/17	Contig	SC	SAMEA1687824	GCA_001121605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/605/GCA_001121605.1_8616_4_39	-	BCR49
Staphylococcus aureus M0196	1388129	PRJNA216298	216298	Terrabacteria group	Firmicutes	2.91557	32.8	-	JCAF01	45	3098	2907	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325253	GCA_000553445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/445/GCA_000553445.1_Stap_aure_M0196_V1	-	M0196
Staphylococcus aureus M0198	1388130	PRJNA216299	216299	Terrabacteria group	Firmicutes	2.86348	32.8	-	JCAG01	32	3000	2839	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325254	GCA_000553465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/465/GCA_000553465.1_Stap_aure_M0198_V1	-	M0198
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7002	52.1	-	CIVF01	46	4854	4504	3/21/15	2/27/17	Contig	SC	SAMEA2064546	GCA_001122325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/325/GCA_001122325.1_10209_5_37	-	UI2006
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.80752	38.1	-	MTRL01	88	2849	2735	5/11/17	5/23/17	Scaffold	FDA	SAMN04395680	GCA_002133205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/205/GCA_002133205.1_ASM213320v1	28464038	PNUSAL001993
Mycobacterium tuberculosis TB_RSA141	1422057	PRJNA228136	228136	Terrabacteria group	Actinobacteria	4.41507	65.5	-	JKSG01	12	4284	4102	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403582	GCA_000676075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/075/GCA_000676075.1_Myco_tube_TB_RSA141_V1	-	TB_RSA141
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.81967	50.6	-	JSNX01	40	4911	4622	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801940	GCA_000780915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/915/GCA_000780915.1_ASM78091v1	25373147	upec-128
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.06963	39.7	-	CMOW01	84	2271	2018	3/23/15	3/10/17	Contig	SC	SAMEA2061498	GCA_001156705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/705/GCA_001156705.1_9803_7_39	-	type strain: N
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.37436	66.4	-	NRAH01	71	6080	5954	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504817	GCA_002326685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/685/GCA_002326685.1_ASM232668v1	-	env159b
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.86045	38.8	-	LZVN01	138	3744	3597	6/17/16	3/20/17	Contig	JCVI	SAMN05238610	GCA_001669575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/575/GCA_001669575.1_ASM166957v1	-	ABUH709
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.54114	57.2	-	NEZD01	93	5589	5323	6/9/17	6/12/17	Contig	JCVI	SAMN06812636	GCA_002185285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/285/GCA_002185285.1_ASM218528v1	-	ARLG-2953
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.63059	57.2	-	NEZF01	116	5754	5467	6/9/17	6/12/17	Contig	JCVI	SAMN06812638	GCA_002185355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/355/GCA_002185355.1_ASM218535v1	-	ARLG-2949
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.79512	39	-	LZWR01	151	3647	3494	6/17/16	3/20/17	Contig	JCVI	SAMN05238667	GCA_001669595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/595/GCA_001669595.1_ASM166959v1	-	ABUH783
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.99298	65.9	-	NRAL01	118	6754	6572	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504813	GCA_002326725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/725/GCA_002326725.1_ASM232672v1	-	env145a
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.07652	39.5	-	CLME01	78	2323	2091	3/21/15	3/11/17	Contig	SC	SAMEA1028721	GCA_001156745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/745/GCA_001156745.1_6938_7_13	-	SMRU2701
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.19789	50.6	-	JSNW01	109	5424	5081	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801941	GCA_000780925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/925/GCA_000780925.1_ASM78092v1	25373147	upec-129
Mycobacterium tuberculosis TB_RSA142	1422058	PRJNA228137	228137	Terrabacteria group	Actinobacteria	4.42535	65.5	-	JKSF01	1	4296	4118	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403583	GCA_000676095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/095/GCA_000676095.1_Myco_tube_TB_RSA142_V1	-	TB_RSA142
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.90825	37.9	-	MTRK01	24	2943	2846	5/11/17	5/23/17	Scaffold	FDA	SAMN04396072	GCA_002133215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/215/GCA_002133215.1_ASM213321v1	28464038	PNUSAL001986
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93327	51.8	-	CJNM01	54	5136	4742	3/21/15	2/27/17	Contig	SC	SAMEA2153846	GCA_001123045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/045/GCA_001123045.1_10608_2_45	-	2009-012656
Staphylococcus aureus M0199	1388131	PRJNA216300	216300	Terrabacteria group	Firmicutes	2.85625	32.8	-	JCAH01	35	2972	2837	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325255	GCA_000553485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/485/GCA_000553485.1_Stap_aure_M0199_V1	-	M0199
Staphylococcus aureus M0201	1388132	PRJNA216301	216301	Terrabacteria group	Firmicutes	2.81521	32.8	-	JCAI01	43	2940	2777	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325256	GCA_000553505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/505/GCA_000553505.1_Stap_aure_M0201_V1	-	M0201
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.72068	52	-	CJOB01	48	4875	4518	3/21/15	2/27/17	Contig	SC	SAMEA1406336	GCA_001123365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/365/GCA_001123365.1_7468_7_66	-	IB5353
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.92111	37.9	-	MTRM01	32	2974	2886	5/11/17	5/23/17	Scaffold	FDA	SAMN04388368	GCA_002133245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/245/GCA_002133245.1_ASM213324v1	28464038	PNUSAL001996
Mycobacterium tuberculosis TB_RSA143	1422059	PRJNA228138	228138	Terrabacteria group	Actinobacteria	4.38838	65.6	-	JKSE01	9	4273	4103	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403584	GCA_000676115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/115/GCA_000676115.1_Myco_tube_TB_RSA143_V1	-	TB_RSA143
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.1391	50.8	-	JSNY01	151	5428	5009	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801939	GCA_000780965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/965/GCA_000780965.1_ASM78096v1	25373147	upec-127
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.20538	39.7	-	CLBU01	55	2421	2197	3/21/15	3/10/17	Contig	SC	SAMEA1025869	GCA_001156785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/785/GCA_001156785.1_6871_1_7	-	SMRU1783
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.35812	66.4	-	NRAM01	144	6074	5937	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504812	GCA_002326745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/745/GCA_002326745.1_ASM232674v1	-	env144b
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.88025	39	-	LZWU01	130	3746	3595	6/17/16	3/20/17	Contig	JCVI	SAMN05238670	GCA_001669605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/605/GCA_001669605.1_ASM166960v1	-	ABUH789
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.52587	57.2	-	NEZJ01	146	5714	5443	6/9/17	6/12/17	Contig	JCVI	SAMN06812642	GCA_002185385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/385/GCA_002185385.1_ASM218538v1	-	ARLG-2862
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.63616	57.2	-	NEZL01	129	5748	5466	6/9/17	6/12/17	Contig	JCVI	SAMN06812644	GCA_002185405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/405/GCA_002185405.1_ASM218540v1	-	ARLG-2850
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.86476	38.8	-	LZWO01	161	3742	3589	6/17/16	3/20/17	Contig	JCVI	SAMN05238664	GCA_001669635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/635/GCA_001669635.1_ASM166963v1	-	ABUH779
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.5104	66.3	-	NRES01	108	6244	6103	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504893	GCA_002329725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/725/GCA_002329725.1_ASM232972v1	-	SJU-W20_3
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.03642	39.7	-	CPMS01	61	2246	2008	3/23/15	3/10/17	Contig	SC	SAMEA1020619	GCA_001156805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/805/GCA_001156805.1_5901_7_4	-	8561-06
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.16967	50.5	-	JSNZ01	84	5236	4931	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801938	GCA_000780995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/995/GCA_000780995.1_ASM78099v1	25373147	upec-126
Mycobacterium tuberculosis TB_RSA144	1422060	PRJNA228139	228139	Terrabacteria group	Actinobacteria	4.42895	65.3	-	JKSD01	18	4334	4101	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403585	GCA_000676135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/135/GCA_000676135.1_Myco_tube_TB_RSA144_V1	-	TB_RSA144
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.91152	37.9	-	MTRN01	22	2953	2849	5/11/17	5/23/17	Scaffold	FDA	SAMN04414044	GCA_002133255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/255/GCA_002133255.1_ASM213325v1	28464038	PNUSAL001922
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93426	51.8	-	CJNL01	56	5138	4750	3/21/15	2/27/17	Contig	SC	SAMEA2159940	GCA_001123625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/625/GCA_001123625.1_10608_2_43	-	2012-010559
Staphylococcus aureus M0202	1388133	PRJNA216302	216302	Terrabacteria group	Firmicutes	2.91238	32.9	-	JCAJ01	48	3086	2914	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325257	GCA_000553525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/525/GCA_000553525.1_Stap_aure_M0202_V1	-	M0202
Staphylococcus aureus M0203	1388134	PRJNA216303	216303	Terrabacteria group	Firmicutes	2.9159	32.9	-	JCAK01	17	3068	2903	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325258	GCA_000553545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/545/GCA_000553545.1_Stap_aure_M0203_V1	-	M0203
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73733	52	-	CJXT01	53	4900	4548	3/21/15	2/27/17	Contig	SC	SAMEA2057253	GCA_001124025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/025/GCA_001124025.1_9953_5_44	-	A373
Listeria monocytogenes	1639	PRJNA302599	302599	Terrabacteria group	Firmicutes	2.91053	37.9	-	MTRP01	23	2942	2848	5/11/17	5/23/17	Scaffold	FDA	SAMN04417753	GCA_002133285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/285/GCA_002133285.1_ASM213328v1	28464038	PNUSAL001994
Mycobacterium tuberculosis TB_RSA145	1422061	PRJNA228140	228140	Terrabacteria group	Actinobacteria	4.41939	65.5	-	JKSC01	7	4293	4120	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403586	GCA_000676155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/155/GCA_000676155.1_Myco_tube_TB_RSA145_V1	-	TB_RSA145
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.1125	50.7	-	JSOA01	98	5330	4926	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801937	GCA_000781005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/005/GCA_000781005.1_ASM78100v1	25373147	upec-125
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05932	39.5	-	COCH02	158	2192	2006	3/23/15	3/5/17	Contig	SC	SAMEA1463233	GCA_001156985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/985/GCA_001156985.2_7622_3_67	-	CH2085
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.50967	66.3	-	NREU01	104	6245	6104	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504891	GCA_002329735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/735/GCA_002329735.1_ASM232973v1	-	SJU-W20_1
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.78865	38.9	-	LZXJ01	145	3636	3487	6/17/16	3/20/17	Contig	JCVI	SAMN05238709	GCA_001669645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/645/GCA_001669645.1_ASM166964v1	-	ABUH808
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.49715	57.3	-	NEZR01	132	5614	5388	6/9/17	6/12/17	Contig	JCVI	SAMN06812651	GCA_002185415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/415/GCA_002185415.1_ASM218541v1	-	ARLG-2800
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.74513	57.1	-	NEZQ01	122	5922	5668	6/9/17	6/12/17	Contig	JCVI	SAMN06812650	GCA_002185425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/425/GCA_002185425.1_ASM218542v1	-	ARLG-2806
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.80006	38.9	-	LZXQ01	125	3648	3508	6/17/16	3/20/17	Contig	JCVI	SAMN05238716	GCA_001669675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/675/GCA_001669675.1_ASM166967v1	-	ABUH741
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.4605	66.4	-	NREY01	95	6231	6100	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504887	GCA_002329765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/765/GCA_002329765.1_ASM232976v1	-	SJU-S79_3
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04989	39.6	-	CNZL02	178	2197	1991	3/23/15	3/5/17	Contig	SC	SAMEA1463253	GCA_001157025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/025/GCA_001157025.2_7553_5_69	-	PT8016
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.98924	50.6	-	JSOB01	71	5141	4819	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801936	GCA_000781035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/035/GCA_000781035.1_ASM78103v1	25373147	upec-124
Mycobacterium tuberculosis TB_RSA146	1422062	PRJNA228141	228141	Terrabacteria group	Actinobacteria	4.41591	65.6	-	JKSB01	33	4301	4130	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403587	GCA_000676175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/175/GCA_000676175.1_Myco_tube_TB_RSA146_V1	-	TB_RSA146
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.93173	37.9	-	FFEJ01	14	2976	2883	2/9/16	3/1/17	Scaffold	SC	SAMEA2383412	GCA_900017105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/105/GCA_900017105.1_12673_8_34	-	2842STDY5753991
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93512	51.8	-	CIUU01	64	5131	4752	3/21/15	2/27/17	Contig	SC	SAMEA2064359	GCA_001124365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/365/GCA_001124365.1_10209_5_19	-	2007-007363
Staphylococcus aureus M0205	1388136	PRJNA216305	216305	Terrabacteria group	Firmicutes	2.91303	32.9	-	JCAM01	39	3083	2891	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325260	GCA_000553575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/575/GCA_000553575.1_Stap_aure_M0205_V1	-	M0205
Staphylococcus aureus M0207	1388137	PRJNA216306	216306	Terrabacteria group	Firmicutes	2.87894	32.9	-	JCAN01	47	3030	2855	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325261	GCA_000553595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/595/GCA_000553595.1_Stap_aure_M0207_V1	-	M0207
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72119	52	-	CJII01	44	4890	4522	3/21/15	2/27/17	Contig	SC	SAMEA1929445	GCA_001124525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/525/GCA_001124525.1_10592_2_10	-	3484
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.00166	37.8	-	FFFG01	11	3062	2974	2/9/16	3/1/17	Scaffold	SC	SAMEA2383338	GCA_900017115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/115/GCA_900017115.1_12754_5_33	-	2842STDY5753916
Mycobacterium tuberculosis TB_RSA147	1422063	PRJNA228142	228142	Terrabacteria group	Actinobacteria	4.42025	65.5	-	JKSA01	20	4297	4114	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403588	GCA_000676195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/195/GCA_000676195.1_Myco_tube_TB_RSA147_V1	-	TB_RSA147
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.27204	50.5	-	JSOC01	101	5432	5070	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801935	GCA_000781045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/045/GCA_000781045.1_ASM78104v1	25373147	upec-123
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04707	39.6	-	COBL02	121	2221	2022	3/23/15	3/5/17	Contig	SC	SAMEA1463072	GCA_001157225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/225/GCA_001157225.2_7622_2_48	-	CH2007
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.46096	66.4	-	NRFA01	89	6227	6097	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504885	GCA_002329775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/775/GCA_002329775.1_ASM232977v1	-	SJU-S79_1
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.86064	38.8	-	LZXU01	170	3747	3588	6/17/16	3/20/17	Contig	JCVI	SAMN05238692	GCA_001669695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/695/GCA_001669695.1_ASM166969v1	-	ABUH765
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.60791	57.2	-	NFAB01	93	5690	5443	6/9/17	6/12/17	Contig	JCVI	SAMN06812661	GCA_002185465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/465/GCA_002185465.1_ASM218546v1	-	ARLG-2723
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.55268	57.2	-	NFAD01	136	5709	5464	6/9/17	6/12/17	Contig	JCVI	SAMN06812621	GCA_002185485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/485/GCA_002185485.1_ASM218548v1	-	ARLG-2718
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.86235	38.9	-	LZXL01	121	3738	3591	6/17/16	3/20/17	Contig	JCVI	SAMN05238711	GCA_001669705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/705/GCA_001669705.1_ASM166970v1	-	ABUH708
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.42692	66.4	-	NRFB01	70	6117	5982	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504884	GCA_002329805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/805/GCA_002329805.1_ASM232980v1	-	SJU-S72_3
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.11775	39.4	-	CLZC01	55	2310	2086	3/21/15	3/11/17	Contig	SC	SAMEA1028984	GCA_001157265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/265/GCA_001157265.1_6983_7_71	-	SMRU2375
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.65079	50.8	-	JSOE01	54	4733	4483	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801933	GCA_000781075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/075/GCA_000781075.1_ASM78107v1	25373147	upec-121
Mycobacterium tuberculosis TB_RSA148	1422064	PRJNA228143	228143	Terrabacteria group	Actinobacteria	4.35	65.6	-	JKRZ01	8	4240	4079	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403589	GCA_000676215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/215/GCA_000676215.1_Myco_tube_TB_RSA148_V1	-	TB_RSA148
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.87783	37.9	-	FFFX01	7	2938	2839	2/9/16	3/1/17	Scaffold	SC	SAMEA2383387	GCA_900017125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/125/GCA_900017125.1_12754_5_82	-	2842STDY5753966
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73427	52	-	CJWQ01	50	4895	4547	3/21/15	2/27/17	Contig	SC	SAMEA2059209	GCA_001124725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/725/GCA_001124725.1_9953_5_10	-	A276
Staphylococcus aureus M0208	1388138	PRJNA216307	216307	Terrabacteria group	Firmicutes	2.87161	32.8	-	JCAO01	52	3037	2875	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325262	GCA_000553615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/615/GCA_000553615.1_Stap_aure_M0208_V1	-	M0208
Staphylococcus aureus M0209	1388139	PRJNA216308	216308	Terrabacteria group	Firmicutes	2.85945	32.8	-	JCAP01	27	3020	2861	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325263	GCA_000553635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/635/GCA_000553635.1_Stap_aure_M0209_V1	-	M0209
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72893	52	-	CJGE01	47	4886	4527	3/21/15	2/27/17	Contig	SC	SAMEA2145865	GCA_001125085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/085/GCA_001125085.1_10561_2_6	-	ERL113717
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.91783	37.9	-	FFGG01	18	2932	2845	2/9/16	3/1/17	Scaffold	SC	SAMEA2383416	GCA_900017135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/135/GCA_900017135.1_12673_8_38	-	2842STDY5753995
Mycobacterium tuberculosis TB_RSA149	1422065	PRJNA228144	228144	Terrabacteria group	Actinobacteria	4.45571	65.5	-	JKRY01	12	4313	4093	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403590	GCA_000676235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/235/GCA_000676235.1_Myco_tube_TB_RSA149_V1	-	TB_RSA149
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.3281	50.5	-	JSOF01	125	5674	5274	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801932	GCA_000781095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/095/GCA_000781095.1_ASM78109v1	25373147	upec-120
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.20511	39.5	-	CLMT01	46	2437	2207	3/21/15	3/4/17	Contig	SC	SAMEA1028801	GCA_001157365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/365/GCA_001157365.1_6938_7_18	-	SMRU2706
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.42652	66.4	-	NRFC01	69	6120	5984	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504883	GCA_002329815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/815/GCA_002329815.1_ASM232981v1	-	SJU-S72_2
Acinetobacter baumannii	470	PRJNA325559	325559	Proteobacteria	Gammaproteobacteria	3.81239	38.9	-	LZTF01	65	3628	3500	6/17/16	3/20/17	Contig	University of Malaya	SAMN05240750	GCA_001669735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/669/735/GCA_001669735.1_ASM166973v1	-	863
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.54852	57.2	-	NFAF01	128	5713	5463	6/9/17	6/12/17	Contig	JCVI	SAMN06812623	GCA_002185495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/495/GCA_002185495.1_ASM218549v1	-	ARLG-2709
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.6373	57.1	-	NFAI01	135	5792	5529	6/9/17	6/12/17	Contig	JCVI	SAMN06812626	GCA_002185515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/515/GCA_002185515.1_ASM218551v1	-	ARLG-2689
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.8512	38.9	-	LZTQ01	159	3725	3565	6/17/16	3/20/17	Contig	JCVI	SAMN05238649	GCA_001673795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/795/GCA_001673795.1_ASM167379v1	-	ABUH772
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.42662	66.4	-	NRFD01	67	6116	5982	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504882	GCA_002329845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/845/GCA_002329845.1_ASM232984v1	-	SJU-S72_1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04883	39.6	-	CNQU02	156	2194	2007	3/23/15	3/5/17	Contig	SC	SAMEA1032492	GCA_001157425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/425/GCA_001157425.2_6999_1_22	-	R34-3205
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.41086	50.7	-	JSOI01	203	5752	5173	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801929	GCA_000781115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/115/GCA_000781115.1_ASM78111v1	25373147	upec-118
Mycobacterium tuberculosis TB_RSA150	1422066	PRJNA228145	228145	Terrabacteria group	Actinobacteria	4.41665	65.6	-	JKRX01	7	4288	4086	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403591	GCA_000676255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/255/GCA_000676255.1_Myco_tube_TB_RSA150_V1	-	TB_RSA150
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.81593	37.5	-	FFHQ01	65	2787	2672	2/9/16	3/2/17	Scaffold	SC	SAMEA2383382	GCA_900017475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/475/GCA_900017475.1_12754_5_77	-	2842STDY5753961
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72716	52	-	CJTE01	53	4878	4521	3/21/15	2/27/17	Contig	SC	SAMEA1903882	GCA_001125485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/485/GCA_001125485.1_9475_6_56	-	A53789
Staphylococcus aureus M0211	1388140	PRJNA216309	216309	Terrabacteria group	Firmicutes	2.85577	32.8	-	JCAQ01	44	3012	2846	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325264	GCA_000553655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/655/GCA_000553655.1_Stap_aure_M0211_V1	-	M0211
Staphylococcus aureus M0214	1388141	PRJNA216310	216310	Terrabacteria group	Firmicutes	2.91937	32.8	-	JCAR01	49	3109	2909	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325265	GCA_000553675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/675/GCA_000553675.1_Stap_aure_M0214_V1	-	M0214
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93693	51.8	-	CIVV01	64	5146	4747	3/21/15	2/27/17	Contig	SC	SAMEA2066517	GCA_001125845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/845/GCA_001125845.1_10209_5_5	-	2007-006110
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.88188	37.9	-	FFFP01	9	2909	2811	2/9/16	3/1/17	Scaffold	SC	SAMEA2383364	GCA_900019025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/025/GCA_900019025.1_12754_5_59	-	2842STDY5753942
Mycobacterium tuberculosis TB_RSA151	1422067	PRJNA228146	228146	Terrabacteria group	Actinobacteria	4.39339	65.6	-	JKRW01	9	4275	4103	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403592	GCA_000676275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/275/GCA_000676275.1_Myco_tube_TB_RSA151_V1	-	TB_RSA151
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.42976	50.7	-	JSOH01	161	5724	5262	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801930	GCA_000781145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/145/GCA_000781145.1_ASM78114v1	25373147	upec-119
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06918	39.5	-	CNXB02	150	2221	2019	3/23/15	3/11/17	Contig	SC	SAMEA1032458	GCA_001157465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/465/GCA_001157465.2_7001_3_10	-	R34-3144
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.22318	66.5	-	NRFE01	72	5903	5778	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504881	GCA_002329865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/865/GCA_002329865.1_ASM232986v1	-	SJU-S9_3
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.87069	38.9	-	LZTS01	125	3743	3595	6/17/16	3/20/17	Contig	JCVI	SAMN05238674	GCA_001673805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/805/GCA_001673805.1_ASM167380v1	-	ABUH706
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.6286	57.1	-	NFAK01	120	5773	5507	6/9/17	6/12/17	Contig	JCVI	SAMN06812628	GCA_002185545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/545/GCA_002185545.1_ASM218554v1	-	ARLG-2585
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.53079	57.2	-	NFAM01	100	5661	5434	6/9/17	6/12/17	Contig	JCVI	SAMN06812630	GCA_002185555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/555/GCA_002185555.1_ASM218555v1	-	ARLG-2568
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.99634	39	-	LZTR01	130	3891	3732	6/17/16	3/20/17	Contig	JCVI	SAMN05238673	GCA_001673815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/815/GCA_001673815.1_ASM167381v1	-	ABUH696
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.22415	66.5	-	NRFI01	83	5919	5791	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504877	GCA_002329885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/885/GCA_002329885.1_ASM232988v1	-	SJU-S6_2
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.01658	39.8	-	CKKT01	57	2231	2003	3/21/15	3/15/17	Contig	SC	SAMEA1023905	GCA_001157585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/585/GCA_001157585.1_6631_7_8	-	1
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.23213	50.4	-	JSOJ01	102	5366	5023	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801928	GCA_000781175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/175/GCA_000781175.1_ASM78117v1	25373147	upec-117
Mycobacterium tuberculosis TB_RSA152	1422068	PRJNA228147	228147	Terrabacteria group	Actinobacteria	4.40877	65.6	-	JKRV01	23	4282	4106	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403593	GCA_000676295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/295/GCA_000676295.1_Myco_tube_TB_RSA152_V1	-	TB_RSA152
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.87165	37.9	-	FFES01	8	2933	2839	2/9/16	3/1/17	Scaffold	SC	SAMEA2383300	GCA_900022055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/055/GCA_900022055.1_12754_4_90	-	2842STDY5753878
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB4240	222606	Proteobacteria	Gammaproteobacteria	4.75071	52	-	CJDE01	43	4906	4552	3/21/15	2/27/17	Contig	SC	SAMEA2145989	GCA_001126185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/185/GCA_001126185.1_10541_1_66	-	ST2338/98
Staphylococcus aureus M0215	1388142	PRJNA216311	216311	Terrabacteria group	Firmicutes	2.85331	32.8	-	JCAS01	46	3000	2836	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325266	GCA_000553695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/695/GCA_000553695.1_Stap_aure_M0215_V1	-	M0215
Staphylococcus aureus M0218	1388143	PRJNA216312	216312	Terrabacteria group	Firmicutes	2.86744	32.8	-	JCAT01	56	3035	2860	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325267	GCA_000553715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/715/GCA_000553715.1_Stap_aure_M0218_V1	-	M0218
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69651	52.1	-	CJIY01	41	4855	4502	3/21/15	2/27/17	Contig	SC	SAMEA1929464	GCA_001126705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/705/GCA_001126705.1_10592_2_27	-	21669
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.01625	37.8	-	FFEW01	16	3073	2980	2/9/16	3/1/17	Scaffold	SC	SAMEA2383311	GCA_900022065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/065/GCA_900022065.1_12754_5_6	-	2842STDY5753889
Mycobacterium tuberculosis TB_RSA153	1422069	PRJNA228148	228148	Terrabacteria group	Actinobacteria	4.39252	65.6	-	JKRU01	16	4274	4098	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403594	GCA_000676315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/315/GCA_000676315.1_Myco_tube_TB_RSA153_V1	-	TB_RSA153
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.92909	50.6	-	JSOK01	58	5075	4691	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801927	GCA_000781195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/195/GCA_000781195.1_ASM78119v1	25373147	upec-116
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12406	39.7	-	CQVZ01	80	2406	2167	3/22/15	3/4/17	Contig	SC	SAMEA1025658	GCA_001157785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/785/GCA_001157785.1_6710_8_18	-	SMRU1410
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.22338	66.5	-	NRFJ01	71	5907	5779	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504876	GCA_002329905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/905/GCA_002329905.1_ASM232990v1	-	SJU-S6_1
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.87287	38.9	-	LZTU01	116	3751	3606	6/17/16	3/20/17	Contig	JCVI	SAMN05238676	GCA_001673825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/825/GCA_001673825.1_ASM167382v1	-	ABUH751
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.39563	57.2	-	NFAO01	112	5543	5317	6/9/17	6/12/17	Contig	JCVI	SAMN06812632	GCA_002185565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/565/GCA_002185565.1_ASM218556v1	-	ARLG-2550
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.54858	57.2	-	NFAU01	80	5566	5297	6/9/17	6/12/17	Contig	JCVI	SAMN06812594	GCA_002185575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/575/GCA_002185575.1_ASM218557v1	-	ARLG-2512
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.76792	38.9	-	LZTV01	110	3647	3504	6/17/16	3/20/17	Contig	JCVI	SAMN05238677	GCA_001673875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/875/GCA_001673875.1_ASM167387v1	-	ABUH699
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.41416	66.5	-	NRFK01	81	6114	5986	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504875	GCA_002329925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/925/GCA_002329925.1_ASM232992v1	-	SJU-R10_3
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0004	39.7	-	CNWG02	226	2109	1955	3/22/15	3/5/17	Contig	SC	SAMEA1032544	GCA_001157805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/805/GCA_001157805.2_7001_1_20	-	R34-3097
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.36801	50.6	-	JSOL01	66	5549	5216	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801926	GCA_000781215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/215/GCA_000781215.1_ASM78121v1	25373147	upec-115
Mycobacterium tuberculosis TB_RSA154	1422070	PRJNA228149	228149	Terrabacteria group	Actinobacteria	4.39314	65.6	-	JKRT01	11	4282	4105	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403595	GCA_000676335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/335/GCA_000676335.1_Myco_tube_TB_RSA154_V1	-	TB_RSA154
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.0114	37.9	-	FFFS01	15	3107	3019	2/9/16	3/1/17	Scaffold	SC	SAMEA2383379	GCA_900022465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/465/GCA_900022465.1_12754_5_74	-	2842STDY5753958
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2770	204451	Proteobacteria	Gammaproteobacteria	4.72525	52	-	CJRO01	43	4886	4524	3/21/15	2/27/17	Contig	SC	SAMEA1687848	GCA_001126745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/745/GCA_001126745.1_8616_4_37	-	BCR43
Staphylococcus aureus M0219	1388144	PRJNA216313	216313	Terrabacteria group	Firmicutes	2.88891	32.8	-	JCAU01	66	3060	2890	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325268	GCA_000553735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/735/GCA_000553735.1_Stap_aure_M0219_V1	-	M0219
Staphylococcus aureus M0220	1388145	PRJNA216314	216314	Terrabacteria group	Firmicutes	2.87718	32.8	-	JCAV01	36	3030	2861	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325269	GCA_000553755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/755/GCA_000553755.1_Stap_aure_M0220_V1	-	M0220
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74442	52.1	-	CIVU01	44	4935	4579	3/21/15	2/27/17	Contig	SC	SAMEA2067825	GCA_001127105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/105/GCA_001127105.1_10209_5_48	-	UI2658
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.9176	37.9	-	FFEK01	16	2933	2847	2/9/16	3/2/17	Scaffold	SC	SAMEA2383415	GCA_900024455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/455/GCA_900024455.1_12673_8_37	-	2842STDY5753994
Mycobacterium tuberculosis TB_RSA155	1422071	PRJNA228150	228150	Terrabacteria group	Actinobacteria	4.39053	65.6	-	JKRS01	78	4316	4104	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403596	GCA_000676355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/355/GCA_000676355.1_Myco_tube_TB_RSA155_V1	-	TB_RSA155
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.92999	50.7	-	JSOM01	69	5018	4794	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801925	GCA_000781235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/235/GCA_000781235.1_ASM78123v1	25373147	upec-114
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09309	39.6	-	COAP02	183	2279	2065	3/23/15	3/11/17	Contig	SC	SAMEA1463184	GCA_001157905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/905/GCA_001157905.2_7622_2_14	-	BR1041
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.41473	66.5	-	NRFM01	78	6117	5988	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504873	GCA_002329935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/935/GCA_002329935.1_ASM232993v1	-	SJU-R10_1
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.96951	39	-	LZUC01	149	3869	3714	6/17/16	3/20/17	Contig	JCVI	SAMN05238684	GCA_001673895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/895/GCA_001673895.1_ASM167389v1	-	ABUH774
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.48446	57.2	-	NFBF01	95	5609	5376	6/9/17	6/12/17	Contig	JCVI	SAMN06812605	GCA_002185625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/625/GCA_002185625.1_ASM218562v1	-	ARLG-2191
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.48756	57.2	-	NFAX01	105	5653	5411	6/9/17	6/12/17	Contig	JCVI	SAMN06812597	GCA_002185645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/645/GCA_002185645.1_ASM218564v1	-	ARLG-2485
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.85724	38.9	-	LZUA01	132	3746	3584	6/17/16	3/20/17	Contig	JCVI	SAMN05238682	GCA_001673905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/905/GCA_001673905.1_ASM167390v1	-	ABUH729
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.2969	66.5	-	NRFN01	88	5978	5855	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504872	GCA_002329965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/965/GCA_002329965.1_ASM232996v1	-	SJU-R8_3
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10436	39.7	-	CLHE01	52	2317	2102	3/21/15	3/11/17	Contig	SC	SAMEA1026204	GCA_001157945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/945/GCA_001157945.1_6925_4_6	-	SMRU2142
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.75787	50.7	-	JSON01	55	4816	4548	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801924	GCA_000781255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/255/GCA_000781255.1_ASM78125v1	25373147	upec-113
Mycobacterium tuberculosis TB_RSA156	1422072	PRJNA228151	228151	Terrabacteria group	Actinobacteria	4.40763	65.6	-	JKRR01	71	4320	4120	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403597	GCA_000676375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/375/GCA_000676375.1_Myco_tube_TB_RSA156_V1	-	TB_RSA156
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.98442	37.9	-	FFFE01	14	3020	2932	2/9/16	3/1/17	Scaffold	SC	SAMEA2383333	GCA_900024465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/465/GCA_900024465.1_12754_5_28	-	2842STDY5753911
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93335	51.8	-	CIUX01	62	5136	4754	3/21/15	2/27/17	Contig	SC	SAMEA2064358	GCA_001128685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/685/GCA_001128685.1_10209_5_16	-	2007-024445
Staphylococcus aureus M0224	1388146	PRJNA216315	216315	Terrabacteria group	Firmicutes	2.86222	32.8	-	JCAW01	36	3005	2832	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325270	GCA_000553775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/775/GCA_000553775.1_Stap_aure_M0224_V1	-	M0224
Staphylococcus aureus M0225	1388147	PRJNA216316	216316	Terrabacteria group	Firmicutes	2.88454	32.8	-	JCAX01	43	3042	2874	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325271	GCA_000553795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/795/GCA_000553795.1_Stap_aure_M0225_V1	-	M0225
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7168	52.1	-	CJKR01	43	4867	4510	3/21/15	2/27/17	Contig	SC	SAMEA1930173	GCA_001129225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/225/GCA_001129225.1_10593_2_37	-	E00-6999
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.87144	37.9	-	FFFR01	6	2926	2839	2/9/16	3/1/17	Scaffold	SC	SAMEA2383371	GCA_900026895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/895/GCA_900026895.1_12754_5_66	-	2842STDY5753950
Mycobacterium tuberculosis TB_RSA157	1422073	PRJNA228152	228152	Terrabacteria group	Actinobacteria	4.41347	65.6	-	JKRQ01	5	4281	4117	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403598	GCA_000676395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/395/GCA_000676395.1_Myco_tube_TB_RSA157_V1	-	TB_RSA157
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.14695	50.7	-	JSOP01	123	5384	4996	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801922	GCA_000781275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/275/GCA_000781275.1_ASM78127v1	25373147	upec-111
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.13277	39.6	-	CKJE01	44	2370	2124	3/21/15	3/11/17	Contig	SC	SAMEA1023665	GCA_001158045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/045/GCA_001158045.1_6631_5_14	-	14
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.29643	66.5	-	NRFO01	87	5984	5858	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504871	GCA_002329975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/329/975/GCA_002329975.1_ASM232997v1	-	SJU-R8_2
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.87737	38.9	-	LZTZ01	123	3751	3600	6/17/16	3/20/17	Contig	JCVI	SAMN05238681	GCA_001673915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/915/GCA_001673915.1_ASM167391v1	-	ABUH723
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.51781	57.2	-	NFBJ01	111	5696	5425	6/9/17	6/12/17	Contig	JCVI	SAMN06812609	GCA_002185655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/655/GCA_002185655.1_ASM218565v1	-	ARLG-2134
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.6758	57	-	NFBE01	132	5869	5597	6/9/17	6/12/17	Contig	JCVI	SAMN06812604	GCA_002185665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/665/GCA_002185665.1_ASM218566v1	-	ARLG-2423
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.83556	39	-	LZUD01	163	3713	3550	6/17/16	3/20/17	Contig	JCVI	SAMN05238685	GCA_001673955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/955/GCA_001673955.1_ASM167395v1	-	ABUH790
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.46049	66.4	-	NREZ01	88	6227	6094	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504886	GCA_002330005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/005/GCA_002330005.1_ASM233000v1	-	SJU-S79_2
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09252	39.6	-	COAW02	178	2267	2048	3/22/15	3/11/17	Contig	SC	SAMEA1463037	GCA_001158245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/245/GCA_001158245.2_7622_2_26	-	BR1081
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.09494	50.6	-	JSOO01	65	5240	4890	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801923	GCA_000781295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/295/GCA_000781295.1_ASM78129v1	25373147	upec-112
Mycobacterium tuberculosis TB_RSA158	1422074	PRJNA228153	228153	Terrabacteria group	Actinobacteria	4.43361	65.6	-	JKRP01	12	4293	4114	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403599	GCA_000676415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/415/GCA_000676415.1_Myco_tube_TB_RSA158_V1	-	TB_RSA158
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.09981	37.7	-	FFFU01	16	3215	3102	2/9/16	3/1/17	Scaffold	SC	SAMEA2383381	GCA_900026905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/905/GCA_900026905.1_12754_5_76	-	2842STDY5753960
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.59563	52.2	-	CJXK01	45	4728	4390	3/21/15	2/27/17	Contig	SC	SAMEA2059356	GCA_001129245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/245/GCA_001129245.1_9953_5_34	-	A357
Staphylococcus aureus M0226	1388148	PRJNA216317	216317	Terrabacteria group	Firmicutes	2.89047	32.8	-	JCAY01	50	3048	2869	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325272	GCA_000553815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/815/GCA_000553815.1_Stap_aure_M0226_V1	-	M0226
Staphylococcus aureus M0227	1388149	PRJNA216318	216318	Terrabacteria group	Firmicutes	2.86919	32.8	-	JCAZ01	44	3022	2859	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325273	GCA_000553835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/835/GCA_000553835.1_Stap_aure_M0227_V1	-	M0227
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74951	52.1	-	CILT01	49	4924	4550	3/21/15	2/27/17	Contig	SC	SAMEA1903848	GCA_001129305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/305/GCA_001129305.1_9475_6_21	-	1023407
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.01022	37.9	-	FFGD01	13	3116	3019	2/9/16	3/1/17	Scaffold	SC	SAMEA2383408	GCA_900026915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/915/GCA_900026915.1_12673_8_30	-	2842STDY5753987
Mycobacterium tuberculosis TB_RSA159	1422075	PRJNA228154	228154	Terrabacteria group	Actinobacteria	4.39262	65.5	-	JKRO01	8	4258	4090	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403600	GCA_000676435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/435/GCA_000676435.1_Myco_tube_TB_RSA159_V1	-	TB_RSA159
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.15049	50.7	-	JSOQ01	70	5305	5010	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801921	GCA_000781315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/315/GCA_000781315.1_ASM78131v1	25373147	upec-110
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.02206	39.7	-	CNUP02	141	2199	2003	3/22/15	3/5/17	Contig	SC	SAMEA1032605	GCA_001158345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/345/GCA_001158345.2_6999_6_23	-	333793
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.22402	66.5	-	NRFF01	68	5903	5775	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504880	GCA_002330015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/015/GCA_002330015.1_ASM233001v1	-	SJU-S9_2
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.83736	38.9	-	LZUE01	155	3711	3559	6/17/16	3/20/17	Contig	JCVI	SAMN05238686	GCA_001673975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/975/GCA_001673975.1_ASM167397v1	-	ABUH814
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.58004	57.2	-	NFBL01	90	5649	5415	6/9/17	6/12/17	Contig	JCVI	SAMN06812611	GCA_002185705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/705/GCA_002185705.1_ASM218570v1	-	ARLG-2132
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.55823	57.2	-	NFBU01	138	5723	5466	6/9/17	6/12/17	Contig	JCVI	SAMN06812579	GCA_002185725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/725/GCA_002185725.1_ASM218572v1	-	ARLG-2079
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.86248	38.9	-	LZUH01	118	3735	3590	6/17/16	3/20/17	Contig	JCVI	SAMN05238689	GCA_001673985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/985/GCA_001673985.1_ASM167398v1	-	ABUH737
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.22305	66.5	-	NRFG01	77	5910	5782	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504879	GCA_002330045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/045/GCA_002330045.1_ASM233004v1	-	SJU-S9_1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.15247	39.5	-	CNPY02	261	2330	2111	3/22/15	3/11/17	Contig	SC	SAMEA1032466	GCA_001158525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/525/GCA_001158525.2_6952_4_5	-	436154
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.03567	50.7	-	JSOS01	88	5227	4861	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801918	GCA_000781335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/335/GCA_000781335.1_ASM78133v1	25373147	upec-108
Mycobacterium tuberculosis TB_RSA160	1422076	PRJNA228155	228155	Terrabacteria group	Actinobacteria	4.37603	65.6	-	JKRN01	39	4283	4094	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403601	GCA_000676455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/455/GCA_000676455.1_Myco_tube_TB_RSA160_V1	-	TB_RSA160
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.92293	37.9	-	FFGI01	10	2972	2889	2/9/16	3/1/17	Scaffold	SC	SAMEA2383277	GCA_900026925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/925/GCA_900026925.1_12754_4_67	-	2842STDY5753855
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.97368	52.1	-	CQHC01	53	5155	4874	3/22/15	2/27/17	Contig	SC	SAMEA1568531	GCA_001130025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/025/GCA_001130025.1_8490_2_93	-	CH50
Staphylococcus aureus M0228	1388150	PRJNA216319	216319	Terrabacteria group	Firmicutes	2.86076	32.8	-	JCBA01	69	3006	2836	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325274	GCA_000553855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/855/GCA_000553855.1_Stap_aure_M0228_V1	-	M0228
Staphylococcus aureus M0241	1388157	PRJNA216326	216326	Terrabacteria group	Firmicutes	2.90833	32.9	-	JCBH01	68	3094	2913	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325281	GCA_000553875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/875/GCA_000553875.1_Stap_aure_M0241_V1	-	M0241
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3164	204701	Proteobacteria	Gammaproteobacteria	4.93579	51.8	-	CJRE01	52	5129	4753	3/21/15	2/27/17	Contig	SC	SAMEA1571937	GCA_001130285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/285/GCA_001130285.1_8525_3_45	-	Ke466
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.94735	37.9	-	FFGZ01	17	3012	2936	2/9/16	3/1/17	Scaffold	SC	SAMEA2383336	GCA_900026935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/935/GCA_900026935.1_12754_5_31	-	2842STDY5753914
Mycobacterium tuberculosis TB_RSA161	1422077	PRJNA228156	228156	Terrabacteria group	Actinobacteria	4.39386	65.6	-	JKRM01	11	4262	4086	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403602	GCA_000676475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/475/GCA_000676475.1_Myco_tube_TB_RSA161_V1	-	TB_RSA161
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.20891	50.5	-	JSOR01	86	5337	4982	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801919	GCA_000781355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/355/GCA_000781355.1_ASM78135v1	25373147	upec-109
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12602	39.6	-	CNTG02	149	2314	2108	3/22/15	3/11/17	Contig	SC	SAMEA1032550	GCA_001158625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/625/GCA_001158625.2_6999_4_19	-	135631
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.47199	66.3	-	NRFP01	99	6272	6126	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504849	GCA_002330065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/065/GCA_002330065.1_ASM233006v1	-	S1f
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.85949	38.8	-	LZUF01	173	3751	3590	6/17/16	3/20/17	Contig	JCVI	SAMN05238687	GCA_001674015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/015/GCA_001674015.1_ASM167401v1	-	ABUH764
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.62758	57.1	-	NFBV01	111	5776	5534	6/9/17	6/12/17	Contig	JCVI	SAMN06812580	GCA_002185735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/735/GCA_002185735.1_ASM218573v1	-	ARLG-2060
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.65364	57.1	-	NFBZ01	130	5817	5558	6/9/17	6/12/17	Contig	JCVI	SAMN06812584	GCA_002185745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/745/GCA_002185745.1_ASM218574v1	-	ARLG-2021
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.95362	39	-	LZUI01	129	3838	3687	6/17/16	3/20/17	Contig	JCVI	SAMN05238632	GCA_001674035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/035/GCA_001674035.1_ASM167403v1	-	ABUH809
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.73321	66.2	-	NREW01	102	6507	6348	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504889	GCA_002330075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/075/GCA_002330075.1_ASM233007v1	-	SJU-W4_2
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08365	39.5	-	CRNY01	63	2280	2048	3/23/15	3/11/17	Contig	SC	SAMEA1025614	GCA_001158665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/665/GCA_001158665.1_6755_5_10	-	SMRU1162
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.9673	50.5	-	JSOT01	108	5191	4859	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801917	GCA_000781375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/375/GCA_000781375.1_ASM78137v1	25373147	upec-107
Mycobacterium tuberculosis TB_RSA162	1422078	PRJNA228157	228157	Terrabacteria group	Actinobacteria	4.39892	65.6	-	JKRL01	6	4270	4090	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403603	GCA_000676495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/495/GCA_000676495.1_Myco_tube_TB_RSA162_V1	-	TB_RSA162
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.88301	37.9	-	FFHO01	8	2904	2812	2/9/16	3/2/17	Scaffold	SC	SAMEA2383365	GCA_900026945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/945/GCA_900026945.1_12754_5_60	-	2842STDY5753943
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72578	52	-	CJPF01	40	4879	4524	3/21/15	2/27/17	Contig	SC	SAMEA1572781	GCA_001130345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/345/GCA_001130345.1_8447_8_9	-	MDUST81
Staphylococcus aureus M0254	1388166	PRJNA216335	216335	Terrabacteria group	Firmicutes	2.92129	32.8	-	JCBP01	63	3087	2886	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325290	GCA_000553905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/905/GCA_000553905.1_Stap_aure_M0254_V1	-	M0254
Staphylococcus aureus M0255	1388167	PRJNA216336	216336	Terrabacteria group	Firmicutes	2.85978	32.9	-	JCBQ01	28	2987	2819	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325291	GCA_000553925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/925/GCA_000553925.1_Stap_aure_M0255_V1	-	M0255
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71622	52.1	-	CJNS01	46	4889	4519	3/21/15	2/27/17	Contig	SC	SAMEA2149292	GCA_001130905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/905/GCA_001130905.1_10608_2_62	-	2012-014737
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.87709	37.9	-	FFHU01	8	2927	2842	2/9/16	3/1/17	Scaffold	SC	SAMEA2383388	GCA_900026955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/955/GCA_900026955.1_12754_5_83	-	2842STDY5753967
Mycobacterium tuberculosis TB_RSA163	1422079	PRJNA228158	228158	Terrabacteria group	Actinobacteria	4.41014	65.6	-	JKRK01	5	4279	4109	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403604	GCA_000676515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/515/GCA_000676515.1_Myco_tube_TB_RSA163_V1	-	TB_RSA163
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.06972	50.6	-	JSOU01	99	5243	4931	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801916	GCA_000781385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/385/GCA_000781385.1_ASM78138v1	25373147	upec-106
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.03745	39.7	-	CKQA01	75	2234	2033	3/21/15	3/11/17	Contig	SC	SAMEA1024820	GCA_001158685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/685/GCA_001158685.1_6680_6_17	-	SMRU953
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.7311	66.2	-	NREX01	99	6510	6350	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504888	GCA_002330095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/095/GCA_002330095.1_ASM233009v1	-	SJU-W4_1
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.87358	39	-	LZUJ01	163	3736	3584	6/17/16	3/20/17	Contig	JCVI	SAMN05238637	GCA_001674045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/045/GCA_001674045.1_ASM167404v1	-	ABUH788
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.58562	57.2	-	NFCA01	102	5718	5469	6/9/17	6/12/17	Contig	JCVI	SAMN06812585	GCA_002185755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/755/GCA_002185755.1_ASM218575v1	-	ARLG-2019
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.64631	57.1	-	NFCB01	123	5804	5545	6/9/17	6/12/17	Contig	JCVI	SAMN06812586	GCA_002185805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/805/GCA_002185805.1_ASM218580v1	-	ARLG-2012
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.85561	38.9	-	LZUL01	173	3734	3585	6/17/16	3/20/17	Contig	JCVI	SAMN05238646	GCA_001674075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/075/GCA_001674075.1_ASM167407v1	-	ABUH777
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.85295	66	-	NRFR01	132	6635	6448	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504842	GCA_002330125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/125/GCA_002330125.1_ASM233012v1	-	env396b
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08565	39.6	-	CNPB02	176	2278	2078	3/22/15	3/5/17	Contig	SC	SAMEA1032673	GCA_001158705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/705/GCA_001158705.2_6930_8_13	-	R34-3019
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.18675	50.4	-	JSOV01	73	5315	4996	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801915	GCA_000781415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/415/GCA_000781415.1_ASM78141v1	25373147	upec-105
Mycobacterium tuberculosis TB_RSA164	1422080	PRJNA228159	228159	Terrabacteria group	Actinobacteria	4.41782	65.6	-	JKRJ01	11	4286	4106	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403605	GCA_000676535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/535/GCA_000676535.1_Myco_tube_TB_RSA164_V1	-	TB_RSA164
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.95735	37.9	-	FFHT01	11	3019	2941	2/9/16	3/1/17	Scaffold	SC	SAMEA2383390	GCA_900026965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/965/GCA_900026965.1_12754_5_85	-	2842STDY5753969
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.90615	51.9	-	CIVA01	57	5117	4727	3/21/15	2/27/17	Contig	SC	SAMEA2067819	GCA_001131365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/365/GCA_001131365.1_10209_5_30	-	UI1236
Staphylococcus aureus M0256	1388168	PRJNA216337	216337	Terrabacteria group	Firmicutes	2.90587	32.8	-	JCBR01	58	3060	2890	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325292	GCA_000553945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/945/GCA_000553945.1_Stap_aure_M0256_V1	-	M0256
Staphylococcus aureus M0258	1388169	PRJNA216338	216338	Terrabacteria group	Firmicutes	2.86585	32.9	-	JCBS01	41	2999	2832	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325293	GCA_000553965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/965/GCA_000553965.1_Stap_aure_M0258_V1	-	M0258
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3164	204701	Proteobacteria	Gammaproteobacteria	4.93541	51.8	-	CJRM01	49	5135	4756	3/21/15	2/27/17	Contig	SC	SAMEA1571979	GCA_001131605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/605/GCA_001131605.1_8525_3_59	-	Ke480
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.92597	37.9	-	FFEI01	11	2976	2875	2/9/16	3/1/17	Scaffold	SC	SAMEA2383410	GCA_900028125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/125/GCA_900028125.1_12673_8_32	-	2842STDY5753989
Mycobacterium tuberculosis TB_RSA165	1422081	PRJNA228160	228160	Terrabacteria group	Actinobacteria	4.42125	65.5	-	JKRI01	25	4318	4103	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403606	GCA_000676555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/555/GCA_000676555.1_Myco_tube_TB_RSA165_V1	-	TB_RSA165
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.77793	50.7	-	JSOW01	50	4869	4629	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801914	GCA_000781435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/435/GCA_000781435.1_ASM78143v1	25373147	upec-104
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08513	39.6	-	COAD02	140	2269	2059	3/23/15	3/11/17	Contig	SC	SAMEA1463117	GCA_001158785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/785/GCA_001158785.2_7553_6_1	-	PT8098
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	7.06239	65.9	-	NRFT01	120	6950	6772	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504837	GCA_002330135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/135/GCA_002330135.1_ASM233013v1	-	env299
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.86861	38.8	-	LZUK01	145	3745	3592	6/17/16	3/20/17	Contig	JCVI	SAMN05238642	GCA_001674085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/085/GCA_001674085.1_ASM167408v1	-	ABUH749
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.62002	57.2	-	NEZB01	126	5759	5517	6/9/17	6/12/17	Contig	JCVI	SAMN06812634	GCA_002185815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/815/GCA_002185815.1_ASM218581v1	-	ARLG-2958
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.65148	57.1	-	NFCC01	122	5813	5563	6/9/17	6/12/17	Contig	JCVI	SAMN06812587	GCA_002185835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/835/GCA_002185835.1_ASM218583v1	-	ARLG-2008
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.87438	38.8	-	LZUN01	123	3752	3602	6/17/16	3/20/17	Contig	JCVI	SAMN05238586	GCA_001674115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/115/GCA_001674115.1_ASM167411v1	-	ABUH712
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.99784	65.8	-	NRFU01	170	6781	6577	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504836	GCA_002330165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/165/GCA_002330165.1_ASM233016v1	-	env241b
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05694	39.6	-	COFJ02	198	2210	2013	3/23/15	3/11/17	Contig	SC	SAMEA1463010	GCA_001159005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/005/GCA_001159005.2_7622_5_77	-	ND6022
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.91813	50.7	-	JSOX01	44	4960	4662	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801913	GCA_000781455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/455/GCA_000781455.1_ASM78145v1	25373147	upec-103
Mycobacterium tuberculosis TB_RSA166	1422082	PRJNA228161	228161	Terrabacteria group	Actinobacteria	4.4137	65.5	-	JKRH01	3	4290	4096	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403607	GCA_000676575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/575/GCA_000676575.1_Myco_tube_TB_RSA166_V1	-	TB_RSA166
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.0429	37.8	-	FFFI01	12	3112	3008	2/9/16	3/1/17	Scaffold	SC	SAMEA2383348	GCA_900029125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/125/GCA_900029125.1_12754_5_43	-	2842STDY5753926
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74653	52.1	-	CJTI01	46	4912	4548	3/21/15	2/27/17	Contig	SC	SAMEA1903881	GCA_001131765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/765/GCA_001131765.1_9475_6_55	-	1032281
Staphylococcus aureus M0262	1388171	PRJNA216340	216340	Terrabacteria group	Firmicutes	2.86013	32.9	-	JCBT01	25	2989	2823	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325295	GCA_000553985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/553/985/GCA_000553985.1_Stap_aure_M0262_V1	-	M0262
Staphylococcus aureus M0263	1388172	PRJNA216341	216341	Terrabacteria group	Firmicutes	2.89114	32.9	-	JCBU01	69	3081	2906	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325296	GCA_000554005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/005/GCA_000554005.1_Stap_aure_M0263_V1	-	M0263
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72566	52	-	CJPG01	42	4887	4535	3/21/15	2/27/17	Contig	SC	SAMEA1572771	GCA_001132065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/065/GCA_001132065.1_8490_5_1	-	MDUST1
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.88804	37.9	-	FFGL01	11	2925	2830	2/9/16	3/1/17	Scaffold	SC	SAMEA2383286	GCA_900029135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/135/GCA_900029135.1_12754_4_76	-	2842STDY5753864
Mycobacterium tuberculosis TB_RSA167	1422083	PRJNA228162	228162	Terrabacteria group	Actinobacteria	4.42505	65.5	-	JKRG01	7	4291	4127	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403608	GCA_000676595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/595/GCA_000676595.1_Myco_tube_TB_RSA167_V1	-	TB_RSA167
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.26967	50.7	-	JSQF01	163	5606	5172	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801878	GCA_000781485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/485/GCA_000781485.1_ASM78148v1	25373147	blood-10-0913
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12727	39.6	-	COBN02	184	2320	2096	3/23/15	3/11/17	Contig	SC	SAMEA1463202	GCA_001159025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/025/GCA_001159025.2_7622_2_6	-	BR1019
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.42473	66.4	-	NRFX01	72	6122	5979	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504829	GCA_002330175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/175/GCA_002330175.1_ASM233017v1	-	env204
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.9651	38.9	-	LZUM01	175	3866	3703	6/17/16	3/20/17	Contig	JCVI	SAMN05238647	GCA_001674135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/135/GCA_001674135.1_ASM167413v1	-	ABUH778
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.30518	57.3	-	NEZG01	50	5320	5098	6/9/17	6/12/17	Contig	JCVI	SAMN06812639	GCA_002185885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/885/GCA_002185885.1_ASM218588v1	-	ARLG-2946
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.48205	57.2	-	NEZH01	134	5664	5404	6/9/17	6/12/17	Contig	JCVI	SAMN06812640	GCA_002185905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/905/GCA_002185905.1_ASM218590v1	-	ARLG-2877
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.72134	38.9	-	LZUT01	180	3591	3424	6/17/16	3/20/17	Contig	JCVI	SAMN05238699	GCA_001674155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/155/GCA_001674155.1_ASM167415v1	-	ABUH786
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.52714	66.3	-	NRFY01	87	6271	6110	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504828	GCA_002330205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/205/GCA_002330205.1_ASM233020v1	-	env203
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.07408	39.7	-	CKUA01	61	2305	2085	3/21/15	3/4/17	Contig	SC	SAMEA1025875	GCA_001159205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/205/GCA_001159205.1_6823_2_17	-	SMRU1889
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.15603	50.7	-	JSQG01	278	5474	5014	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801877	GCA_000781505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/505/GCA_000781505.1_ASM78150v1	25373147	blood-10-0899rep2
Mycobacterium tuberculosis TB_RSA168	1422084	PRJNA228163	228163	Terrabacteria group	Actinobacteria	4.43856	65.5	-	JKRF01	5	4296	4123	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403609	GCA_000676615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/615/GCA_000676615.1_Myco_tube_TB_RSA168_V1	-	TB_RSA168
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.00114	37.8	-	FFGR01	12	3060	2975	2/9/16	3/1/17	Scaffold	SC	SAMEA2383309	GCA_900029145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/145/GCA_900029145.1_12754_5_4	-	2842STDY5753887
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72351	52.1	-	CJXS01	47	4888	4540	3/21/15	2/27/17	Contig	SC	SAMEA2059359	GCA_001132425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/425/GCA_001132425.1_9953_5_43	-	A370
Staphylococcus aureus M0264	1388173	PRJNA216342	216342	Terrabacteria group	Firmicutes	2.89035	32.9	-	JCBV01	68	3054	2889	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325297	GCA_000554025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/025/GCA_000554025.1_Stap_aure_M0264_V1	-	M0264
Staphylococcus aureus M0265	1388174	PRJNA216343	216343	Terrabacteria group	Firmicutes	2.84477	32.8	-	JCBW01	66	2990	2820	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325298	GCA_000554045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/045/GCA_000554045.1_Stap_aure_M0265_V1	-	M0265
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.68167	52.1	-	CJKS01	41	4834	4473	3/21/15	2/27/17	Contig	SC	SAMEA1930183	GCA_001132445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/445/GCA_001132445.1_10593_2_4	-	E00-2388
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.96279	37.9	-	FFHD01	13	3011	2917	2/9/16	3/1/17	Scaffold	SC	SAMEA2383346	GCA_900029155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/155/GCA_900029155.1_12754_5_41	-	2842STDY5753924
Mycobacterium tuberculosis TB_RSA169	1422085	PRJNA228164	228164	Terrabacteria group	Actinobacteria	4.49045	64.9	-	JKRE01	48	4368	4066	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403610	GCA_000676635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/635/GCA_000676635.1_Myco_tube_TB_RSA169_V1	-	TB_RSA169
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.34482	50.8	-	JSQH01	108	5686	5272	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801876	GCA_000781515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/515/GCA_000781515.1_ASM78151v1	25373147	blood-10-0899rep1
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.03913	39.6	-	CLIZ01	40	2255	2025	3/21/15	3/4/17	Contig	SC	SAMEA1028834	GCA_001159285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/285/GCA_001159285.1_6925_7_3	-	SMRU2499
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.42922	66.4	-	NRFZ01	97	6123	5981	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504827	GCA_002330215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/215/GCA_002330215.1_ASM233021v1	-	env202
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.88105	38.9	-	LZUP01	133	3757	3605	6/17/16	3/20/17	Contig	JCVI	SAMN05238695	GCA_001674165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/165/GCA_001674165.1_ASM167416v1	-	ABUH739
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.43468	57.3	-	NEZK01	107	5551	5312	6/9/17	6/12/17	Contig	JCVI	SAMN06812643	GCA_002185915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/915/GCA_002185915.1_ASM218591v1	-	ARLG-2859
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.58018	57.2	-	NEZI01	125	5723	5474	6/9/17	6/12/17	Contig	JCVI	SAMN06812641	GCA_002185925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/925/GCA_002185925.1_ASM218592v1	-	ARLG-2873
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	4.02646	38.8	-	LZUU01	105	3900	3730	6/17/16	3/20/17	Contig	JCVI	SAMN05238700	GCA_001674185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/185/GCA_001674185.1_ASM167418v1	-	ABUH797
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.24196	66.5	-	NRGB01	74	5919	5791	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504825	GCA_002330235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/235/GCA_002330235.1_ASM233023v1	-	env199
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06093	39.5	-	CNPE02	138	2230	2040	3/23/15	3/5/17	Contig	SC	SAMEA1032433	GCA_001159305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/305/GCA_001159305.2_6930_8_18	-	R34-3024
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.18607	50.6	-	JSQI01	65	5386	5053	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801875	GCA_000781555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/555/GCA_000781555.1_ASM78155v1	25373147	blood-10-0687
Mycobacterium tuberculosis TB_RSA170	1422086	PRJNA228165	228165	Terrabacteria group	Actinobacteria	4.40768	65.5	-	JKRD01	9	4268	4095	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403611	GCA_000676655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/655/GCA_000676655.1_Myco_tube_TB_RSA170_V1	-	TB_RSA170
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.04383	37.8	-	FFHE01	13	3105	3011	2/9/16	3/1/17	Scaffold	SC	SAMEA2383349	GCA_900029165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/165/GCA_900029165.1_12754_5_44	-	2842STDY5753927
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82024	51.9	-	CJVL01	52	5023	4638	3/21/15	2/27/17	Contig	SC	SAMEA2056495	GCA_001132765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/765/GCA_001132765.1_9870_8_5	-	2002-216507
Staphylococcus aureus M0271	1388177	PRJNA216346	216346	Terrabacteria group	Firmicutes	2.84135	32.9	-	JCBX01	45	2978	2805	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325301	GCA_000554065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/065/GCA_000554065.1_Stap_aure_M0271_V1	-	M0271
Staphylococcus aureus M0272	1388178	PRJNA216347	216347	Terrabacteria group	Firmicutes	2.78349	32.8	-	JCBY01	39	2907	2745	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325302	GCA_000554085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/085/GCA_000554085.1_Stap_aure_M0272_V1	-	M0272
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72641	52	-	CJQQ01	44	4887	4532	3/21/15	2/27/17	Contig	SC	SAMEA1572788	GCA_001132905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/905/GCA_001132905.1_8490_6_62	-	MDUST62
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.01106	37.9	-	FFHS01	12	3114	3018	2/9/16	3/1/17	Scaffold	SC	SAMEA2383386	GCA_900029175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/175/GCA_900029175.1_12754_5_81	-	2842STDY5753965
Mycobacterium tuberculosis TB_RSA171	1422087	PRJNA228166	228166	Terrabacteria group	Actinobacteria	4.41227	65.6	-	JKRC01	13	4296	4111	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403612	GCA_000676675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/675/GCA_000676675.1_Myco_tube_TB_RSA171_V1	-	TB_RSA171
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.17791	50.6	-	JSQJ01	61	5355	5011	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801874	GCA_000781575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/575/GCA_000781575.1_ASM78157v1	25373147	blood-10-0686
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.07955	39.6	-	CLLZ01	78	2278	2056	3/21/15	3/11/17	Contig	SC	SAMEA1029117	GCA_001159505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/505/GCA_001159505.1_6938_6_8	-	SMRU2672
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.55233	66.2	-	NRAN01	148	6379	6214	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504811	GCA_002330255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/255/GCA_002330255.1_ASM233025v1	-	env142
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.78683	38.9	-	LZUV01	138	3631	3488	6/17/16	3/20/17	Contig	JCVI	SAMN05238701	GCA_001674215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/215/GCA_001674215.1_ASM167421v1	-	ABUH810
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.31839	57.4	-	NEZM01	77	5429	5180	6/9/17	6/12/17	Contig	JCVI	SAMN06812645	GCA_002185965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/965/GCA_002185965.1_ASM218596v1	-	ARLG-2847
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.48254	57.1	-	NEZP01	93	5531	5268	6/9/17	6/12/17	Contig	JCVI	SAMN06812649	GCA_002185975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/185/975/GCA_002185975.1_ASM218597v1	-	ARLG-2818
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.86261	38.8	-	LZVA01	139	3742	3593	6/17/16	3/20/17	Contig	JCVI	SAMN05238597	GCA_001674235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/235/GCA_001674235.1_ASM167423v1	-	ABUH748
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.35959	66.4	-	NRAQ01	97	6051	5917	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504807	GCA_002330275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/275/GCA_002330275.1_ASM233027v1	-	env137a
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.06857	39.5	-	CKRJ01	57	2289	2060	3/21/15	3/10/17	Contig	SC	SAMEA1023885	GCA_001159565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/565/GCA_001159565.1_6680_8_19	-	SMRU211
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.29654	50.7	-	JSQL01	175	5646	5120	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801872	GCA_000781595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/595/GCA_000781595.1_ASM78159v1	25373147	blood-10-0682
Mycobacterium tuberculosis TB_RSA172	1422088	PRJNA228167	228167	Terrabacteria group	Actinobacteria	4.40785	65.6	-	JKRB01	8	4287	4113	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403613	GCA_000676695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/695/GCA_000676695.1_Myco_tube_TB_RSA172_V1	-	TB_RSA172
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.02726	37.7	-	FFHX01	11	3089	2993	2/9/16	3/1/17	Scaffold	SC	SAMEA2383398	GCA_900029185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/185/GCA_900029185.1_12754_5_93	-	2842STDY5753977
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2770	204451	Proteobacteria	Gammaproteobacteria	4.75467	52	-	CJRX01	39	4906	4548	3/21/15	2/27/17	Contig	SC	SAMEA1687845	GCA_001133745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/745/GCA_001133745.1_8616_4_58	-	SP80
Staphylococcus aureus M0275	1388179	PRJNA216348	216348	Terrabacteria group	Firmicutes	2.87184	32.8	-	JCBZ01	48	3034	2869	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325303	GCA_000554105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/105/GCA_000554105.1_Stap_aure_M0275_V1	-	M0275
Staphylococcus aureus M0276	1388180	PRJNA216349	216349	Terrabacteria group	Firmicutes	2.83827	32.8	-	JCCA01	42	2955	2796	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325304	GCA_000554125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/125/GCA_000554125.1_Stap_aure_M0276_V1	-	M0276
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74404	52.1	-	CJZA01	50	4924	4573	3/21/15	2/27/17	Contig	SC	SAMEA2057373	GCA_001134005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/005/GCA_001134005.1_9953_5_86	-	LNT609
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.92067	37.9	-	FFFJ01	13	2989	2892	2/9/16	3/2/17	Scaffold	SC	SAMEA2383358	GCA_900029865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/865/GCA_900029865.1_12754_5_53	-	2842STDY5753936
Mycobacterium tuberculosis TB_RSA173	1422089	PRJNA228168	228168	Terrabacteria group	Actinobacteria	4.41399	65.6	-	JKRA01	19	4297	4106	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403614	GCA_000676715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/715/GCA_000676715.1_Myco_tube_TB_RSA173_V1	-	TB_RSA173
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.39908	50.6	-	JSQK01	132	5697	5347	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801873	GCA_000781605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/605/GCA_000781605.1_ASM78160v1	25373147	blood-10-0684
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.15518	39.5	-	CLPP01	52	2365	2146	3/21/15	3/11/17	Contig	SC	SAMEA1028901	GCA_001159585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/585/GCA_001159585.1_6949_3_21	-	SMRU2469
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	7.00613	65.8	-	NRAS01	166	6784	6587	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504802	GCA_002330305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/305/GCA_002330305.1_ASM233030v1	-	env113a
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.8705	38.9	-	LZUW01	129	3758	3593	6/17/16	3/20/17	Contig	JCVI	SAMN05238593	GCA_001674245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/245/GCA_001674245.1_ASM167424v1	-	ABUH811
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.58058	57.2	-	NEZV01	110	5631	5361	6/9/17	6/12/17	Contig	JCVI	SAMN06812655	GCA_002186005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/005/GCA_002186005.1_ASM218600v1	-	ARLG-2753
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.65614	57.1	-	NEZX01	132	5821	5568	6/9/17	6/12/17	Contig	JCVI	SAMN06812657	GCA_002186015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/015/GCA_002186015.1_ASM218601v1	-	ARLG-2744
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.87099	38.9	-	LZVC01	114	3750	3605	6/17/16	3/20/17	Contig	JCVI	SAMN05238599	GCA_001674255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/255/GCA_001674255.1_ASM167425v1	-	ABUH752
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	7.14067	65.9	-	NRAT01	113	7026	6806	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504800	GCA_002330315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/315/GCA_002330315.1_ASM233031v1	-	env110a
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.16677	39.7	-	CLJJ01	50	2381	2162	3/21/15	3/11/17	Contig	SC	SAMEA1029107	GCA_001159625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/625/GCA_001159625.1_6925_7_24	-	SMRU2520
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.47939	50.7	-	JSQM01	143	5796	5425	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801871	GCA_000781635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/635/GCA_000781635.1_ASM78163v1	25373147	blood-10-0675
Mycobacterium tuberculosis TB_RSA174	1422090	PRJNA228169	228169	Terrabacteria group	Actinobacteria	4.41106	65.5	-	JKQZ01	10	4299	4106	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403615	GCA_000676735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/735/GCA_000676735.1_Myco_tube_TB_RSA174_V1	-	TB_RSA174
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.95356	37.8	-	FFEN01	10	3026	2936	2/9/16	3/2/17	Scaffold	SC	SAMEA2383281	GCA_900031485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/485/GCA_900031485.1_12754_4_71	-	2842STDY5753859
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93598	51.8	-	CJNG01	59	5143	4743	3/21/15	2/27/17	Contig	SC	SAMEA2153073	GCA_001134485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/485/GCA_001134485.1_10608_2_31	-	2012-011885
Staphylococcus aureus M0278	1388182	PRJNA216351	216351	Terrabacteria group	Firmicutes	2.87267	32.9	-	JCCB01	48	3028	2834	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325306	GCA_000554145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/145/GCA_000554145.1_Stap_aure_M0278_V1	-	M0278
Staphylococcus aureus M0281	1388183	PRJNA216352	216352	Terrabacteria group	Firmicutes	2.87932	32.8	-	JCCC01	59	3059	2890	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325307	GCA_000554165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/165/GCA_000554165.1_Stap_aure_M0281_V1	-	M0281
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93187	51.8	-	CILV01	63	5138	4746	3/21/15	2/27/17	Contig	SC	SAMEA2058227	GCA_001134985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/985/GCA_001134985.1_9870_8_4	-	2008-004254
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.95925	37.8	-	FFHK01	12	3023	2932	2/9/16	3/2/17	Scaffold	SC	SAMEA2383368	GCA_900031495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/495/GCA_900031495.1_12754_5_63	-	2842STDY5753946
Mycobacterium tuberculosis TB_RSA175	1422091	PRJNA228170	228170	Terrabacteria group	Actinobacteria	4.41527	65.5	-	JKQY01	15	4286	4099	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403616	GCA_000676755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/755/GCA_000676755.1_Myco_tube_TB_RSA175_V1	-	TB_RSA175
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.32758	50.6	-	JSQN01	218	5620	5145	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801870	GCA_000781655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/655/GCA_000781655.1_ASM78165v1	25373147	blood-10-0554
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.04613	39.5	-	CRST01	71	2261	2037	3/22/15	3/10/17	Contig	SC	SAMEA1025349	GCA_001159685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/685/GCA_001159685.1_6805_3_2	-	SMRU1442
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.44866	66.5	-	NRAX01	164	6156	6022	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504795	GCA_002330345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/345/GCA_002330345.1_ASM233034v1	-	env104
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.97408	39	-	LZVD01	126	3874	3717	6/17/16	3/20/17	Contig	JCVI	SAMN05238600	GCA_001674295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/295/GCA_001674295.1_ASM167429v1	-	ABUH753
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.61754	57.2	-	NFAH01	122	5757	5492	6/9/17	6/12/17	Contig	JCVI	SAMN06812625	GCA_002186045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/045/GCA_002186045.1_ASM218604v1	-	ARLG-2695
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.63751	57.1	-	NFAC01	118	5797	5538	6/9/17	6/12/17	Contig	JCVI	SAMN06812662	GCA_002186055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/055/GCA_002186055.1_ASM218605v1	-	ARLG-2722
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.86368	38.8	-	LZVF01	168	3749	3589	6/17/16	3/20/17	Contig	JCVI	SAMN05238602	GCA_001674315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/315/GCA_001674315.1_ASM167431v1	-	ABUH761
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.46408	66.4	-	NRAZ01	64	6140	6018	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504793	GCA_002330355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/355/GCA_002330355.1_ASM233035v1	-	env102
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.01118	39.8	-	CRJQ01	57	2195	1984	3/23/15	3/11/17	Contig	SC	SAMEA1025426	GCA_001159705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/705/GCA_001159705.1_6753_2_8	-	SMRU1497
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.45034	50.6	-	JSQO01	137	5695	5270	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801869	GCA_000781675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/675/GCA_000781675.1_ASM78167v1	25373147	blood-10-0541
Mycobacterium tuberculosis TB_RSA176	1422092	PRJNA228171	228171	Terrabacteria group	Actinobacteria	4.39736	65.6	-	JKQX01	74	4331	4114	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403617	GCA_000676775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/775/GCA_000676775.1_Myco_tube_TB_RSA176_V1	-	TB_RSA176
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.01043	37.9	-	FFEH01	14	3110	3018	2/9/16	3/1/17	Scaffold	SC	SAMEA2383407	GCA_900032665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/665/GCA_900032665.1_12673_8_29	-	2842STDY5753986
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72619	52	-	CJWL01	56	4887	4525	3/21/15	2/27/17	Contig	SC	SAMEA2055780	GCA_001135105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/105/GCA_001135105.1_9870_8_87	-	01-2012-002669
Staphylococcus aureus M0283	1388184	PRJNA216353	216353	Terrabacteria group	Firmicutes	2.84173	32.8	-	JCCD01	41	3000	2841	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325308	GCA_000554185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/185/GCA_000554185.1_Stap_aure_M0283_V1	-	M0283
Staphylococcus aureus M0285	1388185	PRJNA216354	216354	Terrabacteria group	Firmicutes	2.94853	33	-	JCCE01	75	3149	2953	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325309	GCA_000554205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/205/GCA_000554205.1_Stap_aure_M0285_V1	-	M0285
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72875	52	-	CILN01	45	4888	4534	3/21/15	2/27/17	Contig	SC	SAMEA1572838	GCA_001135305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/305/GCA_001135305.1_8447_8_16	-	MDUST88
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.04231	37.8	-	FFEG01	13	3163	3070	2/9/16	3/1/17	Scaffold	SC	SAMEA2383402	GCA_900032675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/675/GCA_900032675.1_12673_8_24	-	2842STDY5753981
Mycobacterium tuberculosis TB_RSA177	1422093	PRJNA228172	228172	Terrabacteria group	Actinobacteria	4.41761	65.5	-	JKQW01	15	4292	4093	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403618	GCA_000676795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/795/GCA_000676795.1_Myco_tube_TB_RSA177_V1	-	TB_RSA177
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.4807	50.6	-	JSQP01	125	5839	5410	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801868	GCA_000781695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/695/GCA_000781695.1_ASM78169v1	25373147	blood-10-0223
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.07216	39.6	-	CMKX01	55	2253	1997	3/23/15	3/11/17	Contig	SC	SAMEA1029440	GCA_001159745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/745/GCA_001159745.1_7054_5_12	-	SMRU3060
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.64836	66.2	-	NRBD01	66	6366	6194	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504788	GCA_002330385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/385/GCA_002330385.1_ASM233038v1	-	env092b
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.86047	38.8	-	LZVJ01	123	3740	3590	6/17/16	3/20/17	Contig	JCVI	SAMN05238606	GCA_001674325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/325/GCA_001674325.1_ASM167432v1	-	ABUH758
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.63646	57.1	-	NFAJ01	110	5795	5544	6/9/17	6/12/17	Contig	JCVI	SAMN06812627	GCA_002186085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/085/GCA_002186085.1_ASM218608v1	-	ARLG-2686
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.52233	57.2	-	NFAN01	91	5648	5425	6/9/17	6/12/17	Contig	JCVI	SAMN06812631	GCA_002186095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/095/GCA_002186095.1_ASM218609v1	-	ARLG-2552
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.87271	38.9	-	LZVM01	118	3757	3605	6/17/16	3/20/17	Contig	JCVI	SAMN05238609	GCA_001674345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/345/GCA_001674345.1_ASM167434v1	-	ABUH704
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.30072	66.5	-	NRBF01	59	6033	5895	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504782	GCA_002330395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/395/GCA_002330395.1_ASM233039v1	-	env065b
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08911	39.5	-	CMJP01	57	2288	2050	3/23/15	3/10/17	Contig	SC	SAMEA1026050	GCA_001159845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/845/GCA_001159845.1_7038_8_36	-	SMRU2244
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.3844	50.4	-	JSQQ01	194	5704	5253	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801867	GCA_000781715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/715/GCA_000781715.1_ASM78171v1	25373147	blood-10-0183
Mycobacterium tuberculosis TB_RSA178	1422094	PRJNA228173	228173	Terrabacteria group	Actinobacteria	4.41149	65.5	-	JKQV01	8	4294	4104	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403619	GCA_000676815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/815/GCA_000676815.1_Myco_tube_TB_RSA178_V1	-	TB_RSA178
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.92313	37.9	-	FFEM01	11	2973	2886	2/9/16	3/1/17	Scaffold	SC	SAMEA2383276	GCA_900032685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/685/GCA_900032685.1_12754_4_66	-	2842STDY5753854
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93391	51.8	-	CIUN01	53	5134	4753	3/21/15	2/27/17	Contig	SC	SAMEA2066350	GCA_001135905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/905/GCA_001135905.1_10071_8_94	-	2010K-0534
Staphylococcus aureus M0286	1388186	PRJNA216355	216355	Terrabacteria group	Firmicutes	2.90167	32.9	-	JCCF01	21	3034	2867	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325310	GCA_000554225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/225/GCA_000554225.1_Stap_aure_M0286_V1	-	M0286
Staphylococcus aureus M0287	1388187	PRJNA216356	216356	Terrabacteria group	Firmicutes	2.88679	32.9	-	JCCG01	56	3054	2879	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325311	GCA_000554245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/245/GCA_000554245.1_Stap_aure_M0287_V1	-	M0287
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.87754	51.9	-	CJLE01	56	5081	4705	3/21/15	2/27/17	Contig	SC	SAMEA1930219	GCA_001136605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/605/GCA_001136605.1_10593_2_65	-	07-977
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.88853	37.9	-	FFEO01	8	2927	2829	2/9/16	3/1/17	Scaffold	SC	SAMEA2383278	GCA_900032695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/695/GCA_900032695.1_12754_4_68	-	2842STDY5753856
Mycobacterium tuberculosis TB_RSA179	1422095	PRJNA228174	228174	Terrabacteria group	Actinobacteria	4.40402	65.6	-	JKQU01	1	4284	4112	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403620	GCA_000676835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/835/GCA_000676835.1_Myco_tube_TB_RSA179_V1	-	TB_RSA179
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.93987	50.7	-	JSQR01	80	5135	4783	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801866	GCA_000781735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/735/GCA_000781735.1_ASM78173v1	25373147	blood-10-0065
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0871	39.6	-	CNPN02	186	2278	2063	3/23/15	3/11/17	Contig	SC	SAMEA1032558	GCA_001159865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/865/GCA_001159865.2_6952_4_11	-	448643
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.84792	66.1	-	NRBG01	99	6683	6508	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504781	GCA_002330425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/425/GCA_002330425.1_ASM233042v1	-	env065a
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.84119	38.8	-	LZVI01	158	3710	3562	6/17/16	3/20/17	Contig	JCVI	SAMN05238605	GCA_001674365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/365/GCA_001674365.1_ASM167436v1	-	ABUH762
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.45036	57.3	-	NFAR01	93	5569	5332	6/9/17	6/12/17	Contig	JCVI	SAMN06812591	GCA_002186125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/125/GCA_002186125.1_ASM218612v1	-	ARLG-2523
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.54591	57.2	-	NFAQ01	121	5702	5451	6/9/17	6/12/17	Contig	JCVI	SAMN06812590	GCA_002186135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/135/GCA_002186135.1_ASM218613v1	-	ARLG-2536
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.86178	38.8	-	LZVO01	120	3740	3594	6/17/16	3/20/17	Contig	JCVI	SAMN05238611	GCA_001674395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/395/GCA_001674395.1_ASM167439v1	-	ABUH725
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.86157	66.1	-	NRBH01	120	6725	6524	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504780	GCA_002330435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/435/GCA_002330435.1_ASM233043v1	-	env054
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12927	39.6	-	CMOR01	74	2299	2033	3/23/15	3/11/17	Contig	SC	SAMEA2061499	GCA_001159905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/905/GCA_001159905.1_9803_7_42	-	type strain: N
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.94546	50.7	-	JSQS01	82	5146	4784	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801865	GCA_000781755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/755/GCA_000781755.1_ASM78175v1	25373147	blood-10-0040
Mycobacterium tuberculosis TB_RSA180	1422096	PRJNA228175	228175	Terrabacteria group	Actinobacteria	4.41722	65.5	-	JKQT01	1	4286	4113	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403621	GCA_000676855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/855/GCA_000676855.1_Myco_tube_TB_RSA180_V1	-	TB_RSA180
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.88891	37.9	-	FFER01	9	2921	2829	2/9/16	3/1/17	Scaffold	SC	SAMEA2383285	GCA_900032705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/705/GCA_900032705.1_12754_4_75	-	2842STDY5753863
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72576	52.1	-	CJKW01	46	4894	4547	3/21/15	2/27/17	Contig	SC	SAMEA1930155	GCA_001137065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/065/GCA_001137065.1_10593_2_46	-	E99-6478
Staphylococcus aureus M0289	1388188	PRJNA216357	216357	Terrabacteria group	Firmicutes	2.84421	32.8	-	JCCH01	30	2978	2827	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325312	GCA_000554265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/265/GCA_000554265.1_Stap_aure_M0289_V1	-	M0289
Staphylococcus aureus M0290	1388189	PRJNA216358	216358	Terrabacteria group	Firmicutes	2.92031	32.9	-	JCCI01	82	3109	2919	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325313	GCA_000554285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/285/GCA_000554285.1_Stap_aure_M0290_V1	-	M0290
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93203	51.8	-	CJUU01	57	5139	4751	3/21/15	2/27/17	Contig	SC	SAMEA2055633	GCA_001137545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/545/GCA_001137545.1_9870_8_3	-	2008-003956
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.00136	37.8	-	FFEU01	11	3062	2974	2/9/16	3/1/17	Scaffold	SC	SAMEA2383305	GCA_900032715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/715/GCA_900032715.1_12754_4_95	-	2842STDY5753883
Mycobacterium tuberculosis TB_RSA181	1422097	PRJNA228176	228176	Terrabacteria group	Actinobacteria	4.41549	65.6	-	JKQS01	71	4329	4128	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403622	GCA_000676875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/875/GCA_000676875.1_Myco_tube_TB_RSA181_V1	-	TB_RSA181
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.91415	50.6	-	JSQT01	98	5104	4782	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801864	GCA_000781775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/775/GCA_000781775.1_ASM78177v1	25373147	blood-10-0038
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05399	39.6	-	CNTN02	165	2224	2018	3/23/15	3/5/17	Contig	SC	SAMEA1032436	GCA_001160005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/005/GCA_001160005.2_6999_4_20	-	135771
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.37301	66.5	-	NRBL01	57	6042	5923	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504775	GCA_002330465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/465/GCA_002330465.1_ASM233046v1	-	env006b
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.78978	38.9	-	LZVP01	119	3639	3493	6/17/16	3/20/17	Contig	JCVI	SAMN05238612	GCA_001674415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/415/GCA_001674415.1_ASM167441v1	-	ABUH728
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.59061	57.1	-	NFAS01	170	5747	5492	6/9/17	6/12/17	Contig	JCVI	SAMN06812592	GCA_002186165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/165/GCA_002186165.1_ASM218616v1	-	ARLG-2520
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.63723	57.1	-	NFAT01	119	5804	5554	6/9/17	6/12/17	Contig	JCVI	SAMN06812593	GCA_002186185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/185/GCA_002186185.1_ASM218618v1	-	ARLG-2515
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.97244	39	-	LZVS01	123	3878	3719	6/17/16	3/20/17	Contig	JCVI	SAMN05238619	GCA_001674425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/425/GCA_001674425.1_ASM167442v1	-	ABUH745
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.44154	66.4	-	NRBJ01	69	6232	6105	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504777	GCA_002330475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/475/GCA_002330475.1_ASM233047v1	-	env045
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.03414	39.4	-	CMNR01	42	2242	2022	3/23/15	3/11/17	Contig	SC	SAMEA2061474	GCA_001160165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/165/GCA_001160165.1_9803_7_11	-	45
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.19758	50.6	-	JSQW01	99	5336	4973	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801861	GCA_000781805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/805/GCA_000781805.1_ASM78180v1	25373147	blood-09-1342
Mycobacterium tuberculosis TB_RSA182	1422098	PRJNA228177	228177	Terrabacteria group	Actinobacteria	4.39688	65.5	-	JKQR01	5	4283	4108	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403623	GCA_000676895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/895/GCA_000676895.1_Myco_tube_TB_RSA182_V1	-	TB_RSA182
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.00112	37.8	-	FFEV01	14	3062	2977	2/9/16	3/1/17	Scaffold	SC	SAMEA2383308	GCA_900032725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/725/GCA_900032725.1_12754_5_3	-	2842STDY5753886
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.79429	52.1	-	CJYM01	40	4956	4610	3/21/15	2/27/17	Contig	SC	SAMEA2057367	GCA_001137745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/745/GCA_001137745.1_9953_5_68	-	LNT1360
Staphylococcus aureus M0292	1388191	PRJNA216360	216360	Terrabacteria group	Firmicutes	2.81653	32.9	-	JCCJ01	28	2931	2776	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325315	GCA_000554305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/305/GCA_000554305.1_Stap_aure_M0292_V1	-	M0292
Staphylococcus aureus M0293	1388192	PRJNA216361	216361	Terrabacteria group	Firmicutes	2.8706	32.8	-	JCCK01	55	3040	2859	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325316	GCA_000554325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/325/GCA_000554325.1_Stap_aure_M0293_V1	-	M0293
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.80415	52	-	CJWX01	51	4969	4619	3/21/15	2/27/17	Contig	SC	SAMEA2059212	GCA_001138105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/105/GCA_001138105.1_9953_5_19	-	A286
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.01144	37.8	-	FFEY01	13	3086	2994	2/9/16	3/1/17	Scaffold	SC	SAMEA2383321	GCA_900032735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/735/GCA_900032735.1_12754_5_16	-	2842STDY5753899
Mycobacterium tuberculosis TB_RSA184	1422100	PRJNA228179	228179	Terrabacteria group	Actinobacteria	4.38927	65.6	-	JKQQ01	67	4303	4116	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403625	GCA_000676915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/915/GCA_000676915.1_Myco_tube_TB_RSA184_V1	26941159	TB_RSA184
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.1062	50.6	-	JSQV01	86	5349	4963	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801862	GCA_000781835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/835/GCA_000781835.1_ASM78183v1	25373147	blood-09-1545
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10842	39.5	-	CLDT01	56	2329	2111	3/21/15	3/11/17	Contig	SC	SAMEA1026125	GCA_001160185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/185/GCA_001160185.1_6899_6_12	-	SMRU2076
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	7.03977	65.8	-	NRFQ01	102	6894	6702	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504844	GCA_002330505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/505/GCA_002330505.1_ASM233050v1	-	env408
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.97737	39	-	LZVT01	136	3876	3730	6/17/16	3/20/17	Contig	JCVI	SAMN05238623	GCA_001674435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/435/GCA_001674435.1_ASM167443v1	-	ABUH755
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.51741	57.3	-	NFBA01	70	5570	5331	6/9/17	6/12/17	Contig	JCVI	SAMN06812600	GCA_002186205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/205/GCA_002186205.1_ASM218620v1	-	ARLG-2464
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.50482	57.3	-	NFAW01	129	5654	5407	6/9/17	6/12/17	Contig	JCVI	SAMN06812596	GCA_002186215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/215/GCA_002186215.1_ASM218621v1	-	ARLG-2487
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.87048	38.9	-	LZVU01	142	3756	3611	6/17/16	3/20/17	Contig	JCVI	SAMN05238628	GCA_001674475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/475/GCA_001674475.1_ASM167447v1	-	ABUH763
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.99569	65.9	-	NRBM01	106	6759	6579	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504774	GCA_002330515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/515/GCA_002330515.1_ASM233051v1	-	env005
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05207	39.5	-	CNUN02	129	2245	2033	3/22/15	3/11/17	Contig	SC	SAMEA1032571	GCA_001160205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/205/GCA_001160205.2_6999_5_9	-	163286
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.30922	50.7	-	JSQX01	154	5623	5266	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801860	GCA_000781855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/855/GCA_000781855.1_ASM78185v1	25373147	blood-09-1305rep2
Mycobacterium tuberculosis TB_RSA189	1422103	PRJNA228182	228182	Terrabacteria group	Actinobacteria	4.43823	65.5	-	JKQP01	10	4294	4106	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403628	GCA_000676935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/935/GCA_000676935.1_Myco_tube_TB_RSA189_V1	-	TB_RSA189
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.92497	37.9	-	FFEZ01	11	2992	2906	2/9/16	3/1/17	Scaffold	SC	SAMEA2383325	GCA_900032745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/745/GCA_900032745.1_12754_5_20	-	2842STDY5753903
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73093	52	-	CIWF01	41	4884	4536	3/21/15	2/27/17	Contig	SC	SAMEA2066697	GCA_001138345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/345/GCA_001138345.1_10209_5_62	-	UI54
Staphylococcus aureus M0295	1388193	PRJNA216362	216362	Terrabacteria group	Firmicutes	2.75902	32.8	-	JCCL01	18	2824	2687	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325317	GCA_000554345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/345/GCA_000554345.1_Stap_aure_M0295_V1	-	M0295
Staphylococcus aureus M0296	1388194	PRJNA216363	216363	Terrabacteria group	Firmicutes	2.84929	32.8	-	JCCM01	41	3004	2829	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325318	GCA_000554365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/365/GCA_000554365.1_Stap_aure_M0296_V1	-	M0296
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81357	52.1	-	CJKN01	44	4988	4629	3/21/15	2/27/17	Contig	SC	SAMEA1930235	GCA_001139045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/045/GCA_001139045.1_10593_2_3	-	IPCK
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.01112	37.9	-	FFFC01	14	3109	3021	2/9/16	3/1/17	Scaffold	SC	SAMEA2383329	GCA_900032755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/755/GCA_900032755.1_12754_5_24	-	2842STDY5753907
Mycobacterium tuberculosis TB_RSA190	1422104	PRJNA228183	228183	Terrabacteria group	Actinobacteria	4.41671	65.6	-	JKQO01	4	4287	4109	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403629	GCA_000676955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/955/GCA_000676955.1_Myco_tube_TB_RSA190_V1	-	TB_RSA190
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.35067	50.7	-	JSQY01	122	5663	5295	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801859	GCA_000781875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/875/GCA_000781875.1_ASM78187v1	25373147	blood-09-1305rep1
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.0333	39.6	-	CLGN01	49	2249	2033	3/21/15	3/11/17	Contig	SC	SAMEA1026027	GCA_001160405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/405/GCA_001160405.1_6925_4_15	-	SMRU2151
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.69236	66.2	-	NRFS01	70	6406	6230	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504839	GCA_002330525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/525/GCA_002330525.1_ASM233052v1	-	env334
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.8574	38.9	-	LZVV01	146	3730	3580	6/17/16	3/20/17	Contig	JCVI	SAMN05238570	GCA_001674485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/485/GCA_001674485.1_ASM167448v1	-	ABUH795
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.65389	57.2	-	NFBD01	95	5750	5520	6/9/17	6/12/17	Contig	JCVI	SAMN06812603	GCA_002186245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/245/GCA_002186245.1_ASM218624v1	-	ARLG-2426
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.52037	57.3	-	NFBC01	94	5561	5296	6/9/17	6/12/17	Contig	JCVI	SAMN06812602	GCA_002186255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/255/GCA_002186255.1_ASM218625v1	-	ARLG-2429
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.81127	39	-	LZVW01	150	3670	3531	6/17/16	3/20/17	Contig	JCVI	SAMN05238571	GCA_001674505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/505/GCA_001674505.1_ASM167450v1	-	ABUH796
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.47747	66.3	-	NRFV01	90	6206	6067	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504832	GCA_002330555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/555/GCA_002330555.1_ASM233055v1	-	env224
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.01625	39.7	-	CKID01	55	2211	1995	3/21/15	3/4/17	Contig	SC	SAMEA1024150	GCA_001160485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/485/GCA_001160485.1_6631_3_3	-	18A
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.33963	50.8	-	JSQZ01	134	5657	5288	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801858	GCA_000781895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/895/GCA_000781895.1_ASM78189v1	25373147	blood-09-1294
Mycobacterium tuberculosis TB_RSA191	1422105	PRJNA228184	228184	Terrabacteria group	Actinobacteria	4.41294	65.6	-	JKQN01	4	4288	4111	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403630	GCA_000676975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/975/GCA_000676975.1_Myco_tube_TB_RSA191_V1	-	TB_RSA191
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.01277	37.9	-	FFEL01	9	3116	3027	2/9/16	3/1/17	Scaffold	SC	SAMEA2383417	GCA_900033375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/375/GCA_900033375.1_12673_8_39	-	2842STDY5753996
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.87271	51.9	-	CJDD01	53	5066	4691	3/21/15	2/27/17	Contig	SC	SAMEA2156816	GCA_001139245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/245/GCA_001139245.1_10540_1_7	-	3322/3
Staphylococcus aureus M0297	1388195	PRJNA216364	216364	Terrabacteria group	Firmicutes	2.84071	32.9	-	JCCN01	9	2951	2790	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325319	GCA_000554385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/385/GCA_000554385.1_Stap_aure_M0297_V1	-	M0297
Staphylococcus aureus M0300	1388197	PRJNA216366	216366	Terrabacteria group	Firmicutes	2.88046	32.8	-	JCCO01	66	3060	2893	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325321	GCA_000554405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/405/GCA_000554405.1_Stap_aure_M0300_V1	-	M0300
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.97437	52.1	-	CQHD01	49	5161	4883	3/23/15	2/27/17	Contig	SC	SAMEA1568464	GCA_001139325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/325/GCA_001139325.1_8490_2_90	-	CH47
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.0114	37.9	-	FFFB01	13	3108	3019	2/9/16	3/1/17	Scaffold	SC	SAMEA2383327	GCA_900033385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/385/GCA_900033385.1_12754_5_22	-	2842STDY5753905
Mycobacterium tuberculosis TB_RSA192	1422106	PRJNA228185	228185	Terrabacteria group	Actinobacteria	4.41089	65.5	-	JKQM01	7	4287	4105	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403631	GCA_000676995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/676/995/GCA_000676995.1_Myco_tube_TB_RSA192_V1	-	TB_RSA192
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.02935	50.8	-	JSRA01	144	5228	4853	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801857	GCA_000781915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/915/GCA_000781915.1_ASM78191v1	25373147	blood-09-1290
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.05227	39.7	-	CRLE01	49	2264	2058	3/23/15	3/4/17	Contig	SC	SAMEA1025230	GCA_001160505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/505/GCA_001160505.1_6753_4_8	-	SMRU1544
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.47139	66.4	-	NRFW01	87	6176	6036	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504830	GCA_002330585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/585/GCA_002330585.1_ASM233058v1	-	env207
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.86349	38.9	-	LZVX01	140	3748	3584	6/17/16	3/20/17	Contig	JCVI	SAMN05238572	GCA_001674515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/515/GCA_001674515.1_ASM167451v1	-	ABUH807
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.34602	57.5	-	NFBG01	91	5426	5208	6/9/17	6/12/17	Contig	JCVI	SAMN06812606	GCA_002186265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/265/GCA_002186265.1_ASM218626v1	-	ARLG-2188
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.62987	57	-	NFBH01	130	5814	5549	6/9/17	6/12/17	Contig	JCVI	SAMN06812607	GCA_002186275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/275/GCA_002186275.1_ASM218627v1	-	ARLG-2182
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.97041	39	-	LZVZ01	122	3873	3721	6/17/16	3/20/17	Contig	JCVI	SAMN05238585	GCA_001674555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/555/GCA_001674555.1_ASM167455v1	-	ABUH754
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.43792	66.4	-	NRGA01	58	6160	6027	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504826	GCA_002330595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/595/GCA_002330595.1_ASM233059v1	-	env201
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05799	39.6	-	CNWZ02	181	2212	1992	3/22/15	3/5/17	Contig	SC	SAMEA1032602	GCA_001160625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/625/GCA_001160625.2_7001_2_9	-	R34-3113
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.22419	50.6	-	JSRB01	95	5403	5021	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801856	GCA_000781935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/935/GCA_000781935.1_ASM78193v1	25373147	blood-09-1229
Mycobacterium tuberculosis TB_RSA193	1422107	PRJNA228186	228186	Terrabacteria group	Actinobacteria	4.41742	65.5	-	JKQL01	8	4302	4121	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403632	GCA_000677015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/015/GCA_000677015.1_Myco_tube_TB_RSA193_V1	-	TB_RSA193
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.92445	37.9	-	FFFM01	9	2983	2892	2/9/16	3/1/17	Scaffold	SC	SAMEA2383352	GCA_900033395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/395/GCA_900033395.1_12754_5_47	-	2842STDY5753930
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7367	52.1	-	CJGL01	44	4905	4559	3/21/15	2/27/17	Contig	SC	SAMEA2147262	GCA_001139385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/385/GCA_001139385.1_10562_2_2	-	MDUST112
Staphylococcus aureus M0301	1388198	PRJNA216367	216367	Terrabacteria group	Firmicutes	2.79725	32.8	-	JCCP01	41	2934	2765	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325322	GCA_000554425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/425/GCA_000554425.1_Stap_aure_M0301_V1	-	M0301
Staphylococcus aureus M0302	1388199	PRJNA216368	216368	Terrabacteria group	Firmicutes	2.8792	32.8	-	JCCQ01	65	3053	2883	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325323	GCA_000554445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/445/GCA_000554445.1_Stap_aure_M0302_V1	-	M0302
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69968	52.1	-	CIYM01	46	4857	4513	3/21/15	2/27/17	Contig	SC	SAMEA2066533	GCA_001140585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/585/GCA_001140585.1_10396_8_20	-	UI 3257
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.95902	37.8	-	FFFL01	10	3029	2935	2/9/16	3/1/17	Scaffold	SC	SAMEA2383367	GCA_900033405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/405/GCA_900033405.1_12754_5_62	-	2842STDY5753945
Mycobacterium tuberculosis TB_RSA194	1422108	PRJNA228187	228187	Terrabacteria group	Actinobacteria	4.39865	65.6	-	JKQK01	6	4277	4097	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403633	GCA_000677035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/035/GCA_000677035.1_Myco_tube_TB_RSA194_V1	-	TB_RSA194
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.49192	50.6	-	JSRC01	151	5801	5297	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801855	GCA_000781955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/955/GCA_000781955.1_ASM78195v1	25373147	blood-09-0949
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.027	39.8	-	COBV02	248	2153	1973	3/22/15	3/5/17	Contig	SC	SAMEA1462980	GCA_001160645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/645/GCA_001160645.2_7622_3_51	-	CH2017
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.81915	66.1	-	NRGC01	291	6717	6494	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504823	GCA_002330605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/605/GCA_002330605.1_ASM233060v1	-	env189
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.9595	38.9	-	LZWA01	164	3862	3704	6/17/16	3/20/17	Contig	JCVI	SAMN05238650	GCA_001674575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/575/GCA_001674575.1_ASM167457v1	-	ABUH769
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.59037	57.1	-	NFBK01	122	5724	5473	6/9/17	6/12/17	Contig	JCVI	SAMN06812610	GCA_002186325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/325/GCA_002186325.1_ASM218632v1	-	ARLG-2133
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.38997	57.3	-	NFBR01	87	5514	5285	6/9/17	6/12/17	Contig	JCVI	SAMN06812576	GCA_002186335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/335/GCA_002186335.1_ASM218633v1	-	ARLG-2084
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.873	38.9	-	LZWC01	138	3757	3598	6/17/16	3/20/17	Contig	JCVI	SAMN05238652	GCA_001674585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/585/GCA_001674585.1_ASM167458v1	-	ABUH707
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.33751	66.5	-	NRAO01	70	6021	5893	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504809	GCA_002330625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/625/GCA_002330625.1_ASM233062v1	-	env139
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.06513	39.7	-	CLNB01	59	2284	2052	3/21/15	3/4/17	Contig	SC	SAMEA1028847	GCA_001160685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/685/GCA_001160685.1_6938_7_6	-	SMRU2694
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.30003	50.5	-	JSRE01	63	5469	5095	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801853	GCA_000781965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/965/GCA_000781965.1_ASM78196v1	25373147	blood-09-0829
Mycobacterium tuberculosis TB_RSA195	1422109	PRJNA228188	228188	Terrabacteria group	Actinobacteria	4.44871	65.5	-	JKQJ01	2	4301	4118	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403634	GCA_000677055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/055/GCA_000677055.1_Myco_tube_TB_RSA195_V1	-	TB_RSA195
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.96169	37.9	-	FFEQ01	11	3028	2950	2/9/16	3/1/17	Scaffold	SC	SAMEA2383295	GCA_900033675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/675/GCA_900033675.1_12754_4_85	-	2842STDY5753873
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.97799	52.1	-	CQHE01	53	5162	4885	3/23/15	2/27/17	Contig	SC	SAMEA1568478	GCA_001140725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/725/GCA_001140725.1_8490_2_51	-	CH8
Staphylococcus aureus M0303	1388200	PRJNA216369	216369	Terrabacteria group	Firmicutes	2.86005	32.9	-	JCCR01	41	3011	2827	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325324	GCA_000554465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/465/GCA_000554465.1_Stap_aure_M0303_V1	-	M0303
Staphylococcus aureus M0305	1388202	PRJNA216371	216371	Terrabacteria group	Firmicutes	2.90295	32.9	-	JCCS01	25	3054	2889	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325326	GCA_000554485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/485/GCA_000554485.1_Stap_aure_M0305_V1	-	M0305
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93142	51.8	-	CJJC01	56	5132	4754	3/21/15	2/27/17	Contig	SC	SAMEA1929432	GCA_001141065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/065/GCA_001141065.1_10592_2_32	-	42
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.91932	37.9	-	FFFD01	10	2984	2880	2/9/16	3/1/17	Scaffold	SC	SAMEA2383331	GCA_900033695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/695/GCA_900033695.1_12754_5_26	-	2842STDY5753909
Mycobacterium tuberculosis TB_RSA196	1422110	PRJNA228189	228189	Terrabacteria group	Actinobacteria	4.38821	65.6	-	JKQI01	76	4326	4116	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403635	GCA_000677075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/075/GCA_000677075.1_Myco_tube_TB_RSA196_V1	-	TB_RSA196
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.29844	50.5	-	JSRD01	68	5452	5065	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801854	GCA_000781995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/995/GCA_000781995.1_ASM78199v1	25373147	blood-09-0856
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.99903	39.7	-	COAG02	101	2157	1957	3/22/15	3/11/17	Contig	SC	SAMEA1463027	GCA_001160745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/745/GCA_001160745.2_7553_6_4	-	PT8107
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.28857	66.5	-	NRAP01	71	5983	5860	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504808	GCA_002330665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/665/GCA_002330665.1_ASM233066v1	-	env138
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.86806	38.9	-	LZWB01	142	3746	3592	6/17/16	3/20/17	Contig	JCVI	SAMN05238651	GCA_001674605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/605/GCA_001674605.1_ASM167460v1	-	ABUH705
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.62427	57.1	-	NFBQ01	107	5781	5529	6/9/17	6/12/17	Contig	JCVI	SAMN06812575	GCA_002186365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/365/GCA_002186365.1_ASM218636v1	-	ARLG-2089
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.55233	57.2	-	NFBT01	138	5717	5460	6/9/17	6/12/17	Contig	JCVI	SAMN06812578	GCA_002186375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/375/GCA_002186375.1_ASM218637v1	-	ARLG-2080
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.87165	38.9	-	LZWD01	134	3764	3604	6/17/16	3/20/17	Contig	JCVI	SAMN05238653	GCA_001674635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/635/GCA_001674635.1_ASM167463v1	-	ABUH710
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.9358	66	-	NRAR01	232	6689	6483	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504804	GCA_002330675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/675/GCA_002330675.1_ASM233067v1	-	env126
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.08285	39.7	-	CMIF01	57	2321	2092	3/23/15	3/4/17	Contig	SC	SAMEA1029224	GCA_001160785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/785/GCA_001160785.1_7038_6_23	-	SMRU2999
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.94598	50.8	-	JSRF01	94	5137	4797	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801852	GCA_000782015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/015/GCA_000782015.1_ASM78201v1	25373147	blood-09-0768
Mycobacterium tuberculosis TB_RSA197	1422111	PRJNA228190	228190	Terrabacteria group	Actinobacteria	4.41516	65.5	-	JKQH01	7	4293	4113	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403636	GCA_000677095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/095/GCA_000677095.1_Myco_tube_TB_RSA197_V1	-	TB_RSA197
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.91989	37.9	-	FFHA01	9	2973	2883	2/9/16	3/2/17	Scaffold	SC	SAMEA2383332	GCA_900034285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/285/GCA_900034285.1_12754_5_27	-	2842STDY5753910
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74452	52.1	-	CJKY01	42	4921	4564	3/21/15	2/27/17	Contig	SC	SAMEA1930269	GCA_001141165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/165/GCA_001141165.1_10593_2_51	-	E02-2612
Staphylococcus aureus M0307	1388203	PRJNA216372	216372	Terrabacteria group	Firmicutes	2.90635	32.9	-	JCCT01	49	3080	2903	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325327	GCA_000554505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/505/GCA_000554505.1_Stap_aure_M0307_V1	-	M0307
Staphylococcus aureus M0309	1388204	PRJNA216374	216374	Terrabacteria group	Firmicutes	2.88963	32.9	-	JCCU01	45	3043	2859	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325328	GCA_000554525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/525/GCA_000554525.1_Stap_aure_M0309_V1	-	M0309
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93139	51.8	-	CJLV01	53	5123	4751	3/21/15	2/27/17	Contig	SC	SAMEA2153668	GCA_001141645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/645/GCA_001141645.1_10607_1_65	-	2010-006459
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.00266	37.8	-	FFEX01	12	3065	2978	2/9/16	3/2/17	Scaffold	SC	SAMEA2383314	GCA_900034645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/645/GCA_900034645.1_12754_5_9	-	2842STDY5753892
Mycobacterium tuberculosis TB_RSA199	1422112	PRJNA228191	228191	Terrabacteria group	Actinobacteria	4.42012	65.6	-	JKQG01	7	4284	4098	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403637	GCA_000677115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/115/GCA_000677115.1_Myco_tube_TB_RSA199_V1	-	TB_RSA199
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.89249	50.6	-	JSRG01	53	5131	4815	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801851	GCA_000782035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/035/GCA_000782035.1_ASM78203v1	25373147	blood-09-0767
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.13671	39.6	-	CKQO01	59	2307	2059	3/21/15	3/4/17	Contig	SC	SAMEA1025091	GCA_001160845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/845/GCA_001160845.1_6680_7_10	-	SMRU970
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	7.14403	65.9	-	NRAU01	71	6995	6780	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504799	GCA_002330695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/695/GCA_002330695.1_ASM233069v1	-	env109b
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.87689	38.8	-	LZWF01	117	3754	3606	6/17/16	3/20/17	Contig	JCVI	SAMN05238655	GCA_001674655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/655/GCA_001674655.1_ASM167465v1	-	ABUH718
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.77973	56.8	-	NFBY01	143	5983	5705	6/9/17	6/12/17	Contig	JCVI	SAMN06812583	GCA_002186405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/405/GCA_002186405.1_ASM218640v1	-	ARLG-2022
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.51768	57.3	-	NFBX01	133	5672	5418	6/9/17	6/12/17	Contig	JCVI	SAMN06812582	GCA_002186415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/415/GCA_002186415.1_ASM218641v1	-	ARLG-2027
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	4.14145	38.9	-	LZWK01	94	4055	3900	6/17/16	3/20/17	Contig	JCVI	SAMN05238660	GCA_001674665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/665/GCA_001674665.1_ASM167466v1	-	ABUH733
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.36061	66.4	-	NRAV01	114	6105	5961	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504798	GCA_002330725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/725/GCA_002330725.1_ASM233072v1	-	env108
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.06917	39.8	-	CQUZ01	64	2256	2005	3/23/15	3/4/17	Contig	SC	SAMEA1025294	GCA_001160985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/985/GCA_001160985.1_6710_7_13	-	SMRU1381
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.51737	50.7	-	JSRH01	182	5928	5507	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801850	GCA_000782055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/055/GCA_000782055.1_ASM78205v1	25373147	blood-09-0751
Mycobacterium tuberculosis TB_RSA200	1422113	PRJNA228192	228192	Terrabacteria group	Actinobacteria	4.40794	65.6	-	JKQF01	23	4289	4112	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02403638	GCA_000677135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/135/GCA_000677135.1_Myco_tube_TB_RSA200_V1	-	TB_RSA200
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.90121	37.9	-	FFFK01	9	2933	2853	2/9/16	3/1/17	Scaffold	SC	SAMEA2383354	GCA_900034655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/655/GCA_900034655.1_12754_5_49	-	2842STDY5753932
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.94938	51.8	-	CJWI01	58	5136	4760	3/21/15	2/27/17	Contig	SC	SAMEA2056664	GCA_001142325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/325/GCA_001142325.1_9870_8_83	-	2012-009618
Staphylococcus aureus M0310	1388205	PRJNA216375	216375	Terrabacteria group	Firmicutes	2.88416	32.9	-	JCCV01	64	3074	2893	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325329	GCA_000554545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/545/GCA_000554545.1_Stap_aure_M0310_V1	-	M0310
Staphylococcus aureus M0313	1388206	PRJNA216376	216376	Terrabacteria group	Firmicutes	2.8729	32.8	-	JCCW01	56	3024	2856	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325330	GCA_000554565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/565/GCA_000554565.1_Stap_aure_M0313_V1	-	M0313
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB4240	222606	Proteobacteria	Gammaproteobacteria	4.71576	52.1	-	CJDC01	41	4881	4520	3/21/15	2/27/17	Contig	SC	SAMEA2145298	GCA_001142885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/885/GCA_001142885.1_10541_1_57	-	ST1134/01
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.95704	37.9	-	FFFT01	9	3018	2919	2/9/16	3/1/17	Scaffold	SC	SAMEA2383369	GCA_900034665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/665/GCA_900034665.1_12754_5_64	-	2842STDY5753947
Mycobacterium tuberculosis BTB03-012	1423425	PRJNA229206	229206	Terrabacteria group	Actinobacteria	4.42116	65.6	-	JKHP01	4	4298	4118	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414841	GCA_000677155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/155/GCA_000677155.1_Myco_tube_BTB03-012_V1	-	BTB03-012
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.73134	50.9	-	JSRI01	178	4942	4564	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801849	GCA_000782075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/075/GCA_000782075.1_ASM78207v1	25373147	blood-09-0718
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.13245	39.4	-	CKUQ01	44	2329	2091	3/21/15	3/11/17	Contig	SC	SAMEA1025696	GCA_001161065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/065/GCA_001161065.1_6823_3_12	-	SMRU1908
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.35735	66.5	-	NRAW01	73	6031	5912	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504797	GCA_002330735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/735/GCA_002330735.1_ASM233073v1	-	env107
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.87739	39	-	LZWL01	69	3712	3589	6/17/16	3/20/17	Contig	JCVI	SAMN05238661	GCA_001674695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/695/GCA_001674695.1_ASM167469v1	-	ABUH734
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.38158	57.2	-	NFVF01	64	5421	5166	6/9/17	6/12/17	Contig	JCVI	SAMN05960970	GCA_002186435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/435/GCA_002186435.1_ASM218643v1	-	UNMC_8078
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.54688	57.2	-	NFVG01	70	5613	5349	6/9/17	6/12/17	Contig	JCVI	SAMN05960969	GCA_002186465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/465/GCA_002186465.1_ASM218646v1	-	UNMC_7905
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.86519	38.9	-	LZWP01	150	3750	3596	6/17/16	3/20/17	Contig	JCVI	SAMN05238665	GCA_001674705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/705/GCA_001674705.1_ASM167470v1	-	ABUH780
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.34242	66.5	-	NRAY01	81	6063	5921	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504794	GCA_002330765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/765/GCA_002330765.1_ASM233076v1	-	env103
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.01959	39.7	-	CLXF01	45	2236	2015	3/21/15	3/11/17	Contig	SC	SAMEA1028912	GCA_001161145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/145/GCA_001161145.1_6983_5_7	-	SMRU2311
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.96083	50.7	-	JSRK01	107	5148	4726	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801847	GCA_000782095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/095/GCA_000782095.1_ASM78209v1	25373147	blood-09-0626
Mycobacterium tuberculosis BTB03-108	1423426	PRJNA229207	229207	Terrabacteria group	Actinobacteria	4.41613	65.5	-	JKHO01	7	4288	4118	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414842	GCA_000677175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/175/GCA_000677175.1_Myco_tube_BTB03-108_V1	-	BTB03-108
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.01112	37.9	-	FFFV01	13	3107	3018	2/9/16	3/1/17	Scaffold	SC	SAMEA2383383	GCA_900034675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/675/GCA_900034675.1_12754_5_78	-	2842STDY5753962
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72512	52	-	CIVN01	45	4876	4517	3/21/15	2/27/17	Contig	SC	SAMEA2064545	GCA_001143065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/065/GCA_001143065.1_10209_5_34	-	UI1998
Staphylococcus aureus M0314	1388207	PRJNA216377	216377	Terrabacteria group	Firmicutes	2.87202	32.8	-	JCCX01	54	3030	2862	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325331	GCA_000554585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/585/GCA_000554585.1_Stap_aure_M0314_V1	-	M0314
Staphylococcus aureus M0317	1388209	PRJNA216379	216379	Terrabacteria group	Firmicutes	2.9518	32.8	-	JCCY01	60	3126	2928	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325333	GCA_000554605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/605/GCA_000554605.1_Stap_aure_M0317_V1	-	M0317
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73592	52	-	CJKU01	43	4904	4552	3/21/15	2/27/17	Contig	SC	SAMEA1930174	GCA_001143105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/105/GCA_001143105.1_10593_2_45	-	E00-7463
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.01121	37.9	-	FFFW01	15	3113	3018	2/9/16	3/1/17	Scaffold	SC	SAMEA2383385	GCA_900034685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/685/GCA_900034685.1_12754_5_80	-	2842STDY5753964
Mycobacterium tuberculosis BTB05-481	1423428	PRJNA229209	229209	Terrabacteria group	Actinobacteria	4.42496	65.5	-	JKHM01	4	4290	4118	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414844	GCA_000677195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/195/GCA_000677195.1_Myco_tube_BTB05-481_V1	-	BTB05-481
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.84844	50.9	-	JSRJ01	175	5046	4649	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801848	GCA_000782115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/115/GCA_000782115.1_ASM78211v1	25373147	blood-09-0712
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0036	39.7	-	CNYC02	112	2179	1984	3/23/15	3/11/17	Contig	SC	SAMEA1463301	GCA_001161225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/225/GCA_001161225.2_7553_4_26	-	ND6156
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.34223	66.5	-	NRBA01	47	6007	5888	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504792	GCA_002330775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/775/GCA_002330775.1_ASM233077v1	-	env101
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.79653	38.8	-	LZWS01	168	3693	3533	6/17/16	3/20/17	Contig	JCVI	SAMN05238668	GCA_001674735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/735/GCA_001674735.1_ASM167473v1	-	ABUH784
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.59799	57.2	-	NFVI01	102	5674	5372	6/9/17	6/12/17	Contig	JCVI	SAMN05960881	GCA_002186505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/505/GCA_002186505.1_ASM218650v1	-	PO967
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.56458	57.3	-	NFVO01	102	5608	5274	6/9/17	6/12/17	Contig	JCVI	SAMN05960875	GCA_002186545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/545/GCA_002186545.1_ASM218654v1	-	PO450
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.92155	38.8	-	LZWX01	163	3825	3671	6/17/16	3/20/17	Contig	JCVI	SAMN05238588	GCA_001674755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/755/GCA_001674755.1_ASM167475v1	-	ABUH794
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.45503	66.4	-	NRBB01	97	6226	6073	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504791	GCA_002330805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/805/GCA_002330805.1_ASM233080v1	-	env100
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06884	39.6	-	CNSN02	162	2251	2036	3/23/15	3/5/17	Contig	SC	SAMEA1032407	GCA_001161265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/265/GCA_001161265.2_6999_3_19	-	65435
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.48845	50.9	-	JSRL01	97	5795	5377	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801846	GCA_000782135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/135/GCA_000782135.1_ASM78213v1	25373147	blood-09-0558
Mycobacterium tuberculosis BTB03-168	1423430	PRJNA229211	229211	Terrabacteria group	Actinobacteria	4.40985	65.6	-	JKHK01	4	4298	4118	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414846	GCA_000677215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/215/GCA_000677215.1_Myco_tube_BTB03-168_V1	-	BTB03-168
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.9574	37.9	-	FFFY01	14	3026	2940	2/9/16	3/1/17	Scaffold	SC	SAMEA2383389	GCA_900034695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/695/GCA_900034695.1_12754_5_84	-	2842STDY5753968
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB1252	205706	Proteobacteria	Gammaproteobacteria	4.72295	52.1	-	CJSB01	43	4882	4531	3/21/15	2/27/17	Contig	SC	SAMEA1903760	GCA_001143485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/485/GCA_001143485.1_9475_4_56	-	E1240
Staphylococcus aureus M0318	1388210	PRJNA216380	216380	Terrabacteria group	Firmicutes	2.71666	32.9	-	JCCZ01	43	2833	2648	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325334	GCA_000554625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/625/GCA_000554625.1_Stap_aure_M0318_V1	-	M0318
Staphylococcus aureus M0319	1388211	PRJNA216381	216381	Terrabacteria group	Firmicutes	2.85062	32.8	-	JCDA01	35	3018	2835	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325335	GCA_000554645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/645/GCA_000554645.1_Stap_aure_M0319_V1	-	M0319
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69908	52.1	-	CIVT01	43	4850	4506	3/21/15	2/27/17	Contig	SC	SAMEA2064550	GCA_001143965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/965/GCA_001143965.1_10209_5_49	-	UI2679
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.96327	37.9	-	FFFZ01	11	3034	2948	2/9/16	3/1/17	Scaffold	SC	SAMEA2383391	GCA_900034705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/705/GCA_900034705.1_12754_5_86	-	2842STDY5753970
Mycobacterium tuberculosis BTB03-169	1423431	PRJNA229212	229212	Terrabacteria group	Actinobacteria	4.46741	65.5	-	JKHJ01	5	4312	4098	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414847	GCA_000677235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/235/GCA_000677235.1_Myco_tube_BTB03-169_V1	-	BTB03-169
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.45614	50.5	-	JSRM01	128	5751	5252	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801845	GCA_000782155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/155/GCA_000782155.1_ASM78215v1	25373147	blood-09-0464
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08044	39.6	-	CNNT02	129	2281	2055	3/22/15	3/5/17	Contig	SC	SAMEA1032660	GCA_001161305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/305/GCA_001161305.2_6925_1_63	-	R34-3045
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.33934	66.5	-	NRBC01	71	6083	5958	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504790	GCA_002330815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/815/GCA_002330815.1_ASM233081v1	-	env099
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.97924	38.9	-	LZWZ01	170	3869	3711	6/17/16	3/20/17	Contig	JCVI	SAMN05238590	GCA_001674765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/765/GCA_001674765.1_ASM167476v1	-	ABUH804
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.59873	57.2	-	NFVK01	92	5665	5371	6/9/17	6/12/17	Contig	JCVI	SAMN05960879	GCA_002186585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/585/GCA_002186585.1_ASM218658v1	-	PO633
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.65014	57	-	NFVJ01	95	5662	5385	6/9/17	6/12/17	Contig	JCVI	SAMN05960880	GCA_002186595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/595/GCA_002186595.1_ASM218659v1	-	PO906
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.9833	38.9	-	LZWY01	154	3873	3722	6/17/16	3/20/17	Contig	JCVI	SAMN05238589	GCA_001674785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/785/GCA_001674785.1_ASM167478v1	-	ABUH803
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.97014	65.9	-	NRBI01	81	6800	6628	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504778	GCA_002330835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/835/GCA_002330835.1_ASM233083v1	-	env050
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08092	39.6	-	CNVV02	225	2224	2040	3/23/15	3/11/17	Contig	SC	SAMEA1032425	GCA_001161365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/365/GCA_001161365.2_6999_7_8	-	362412
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.28106	50.9	-	JSRN01	96	5586	5192	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801844	GCA_000782175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/175/GCA_000782175.1_ASM78217v1	25373147	blood-09-0450
Mycobacterium tuberculosis BTB04-001	1423432	PRJNA229213	229213	Terrabacteria group	Actinobacteria	4.40197	65.6	-	JKHI01	17	4272	4063	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414848	GCA_000677255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/255/GCA_000677255.1_Myco_tube_BTB04-001_V1	-	BTB04-001
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.91877	37.9	-	FFGA01	12	2974	2877	2/9/16	3/1/17	Scaffold	SC	SAMEA2383395	GCA_900034715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/715/GCA_900034715.1_12754_5_90	-	2842STDY5753974
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3164	204701	Proteobacteria	Gammaproteobacteria	4.93264	51.8	-	CJQZ01	54	5136	4745	3/21/15	2/27/17	Contig	SC	SAMEA1572005	GCA_001145065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/065/GCA_001145065.1_8525_3_31	-	Ke452
Staphylococcus aureus M0320	1388212	PRJNA216382	216382	Terrabacteria group	Firmicutes	2.88183	32.9	-	JCDB01	69	3056	2885	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325336	GCA_000554665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/665/GCA_000554665.1_Stap_aure_M0320_V1	-	M0320
Staphylococcus aureus M0321	1388213	PRJNA216383	216383	Terrabacteria group	Firmicutes	2.84908	32.8	-	JCDC01	42	2990	2828	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325337	GCA_000554685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/685/GCA_000554685.1_Stap_aure_M0321_V1	-	M0321
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.97143	51.7	-	CJIM01	52	5163	4788	3/21/15	2/27/17	Contig	SC	SAMEA1929457	GCA_001145485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/485/GCA_001145485.1_10592_2_11	-	16599
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.92637	37.9	-	FFGE01	12	2966	2874	2/9/16	3/1/17	Scaffold	SC	SAMEA2383411	GCA_900034725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/725/GCA_900034725.1_12673_8_33	-	2842STDY5753990
Mycobacterium tuberculosis BTB04-011	1423435	PRJNA229216	229216	Terrabacteria group	Actinobacteria	4.42019	65.5	-	JKHH01	5	4298	4096	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414851	GCA_000677275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/275/GCA_000677275.1_Myco_tube_BTB04-011_V1	-	BTB04-011
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.48467	50.7	-	JSRO01	113	5850	5421	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801843	GCA_000782195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/195/GCA_000782195.1_ASM78219v1	25373147	blood-09-0428
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05895	39.6	-	CNZN02	343	2183	2005	3/22/15	3/5/17	Contig	SC	SAMEA1463241	GCA_001161445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/445/GCA_001161445.2_7553_5_71	-	PT8021
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.60788	66	-	NRBO01	121	6353	6168	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504784	GCA_002330865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/865/GCA_002330865.1_ASM233086v1	-	env079
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.86653	38.9	-	LZXA01	163	3741	3578	6/17/16	3/20/17	Contig	JCVI	SAMN05238591	GCA_001674805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/805/GCA_001674805.1_ASM167480v1	-	ABUH805
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.59051	57.2	-	NFVL01	81	5664	5412	6/9/17	6/12/17	Contig	JCVI	SAMN05960878	GCA_002186625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/625/GCA_002186625.1_ASM218662v1	-	PO613
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.43834	57.2	-	NFVN01	76	5459	5211	6/9/17	6/12/17	Contig	JCVI	SAMN05960876	GCA_002186635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/635/GCA_002186635.1_ASM218663v1	-	PO457
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.85559	38.8	-	LZXE01	170	3737	3588	6/17/16	3/20/17	Contig	JCVI	SAMN05238704	GCA_001674835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/835/GCA_001674835.1_ASM167483v1	-	ABUH798
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.90779	65.9	-	NRBK01	101	6662	6445	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504776	GCA_002330875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/875/GCA_002330875.1_ASM233087v1	-	env043
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.03696	39.7	-	CRJS01	55	2212	1994	3/23/15	3/10/17	Contig	SC	SAMEA1025556	GCA_001161485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/485/GCA_001161485.1_6753_3_11	-	SMRU1523
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.92939	50.5	-	JSRP01	36	5031	4753	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801842	GCA_000782215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/215/GCA_000782215.1_ASM78221v1	25373147	blood-09-0409
Mycobacterium tuberculosis BTB04-097	1423436	PRJNA229217	229217	Terrabacteria group	Actinobacteria	4.41362	65.6	-	JKHG01	3	4286	4110	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414852	GCA_000677295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/295/GCA_000677295.1_Myco_tube_BTB04-097_V1	-	BTB04-097
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.01369	37.9	-	FFGH01	11	3121	3025	2/9/16	3/1/17	Scaffold	SC	SAMEA2383418	GCA_900034735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/735/GCA_900034735.1_12673_8_40	-	2842STDY5753997
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72835	52	-	CJQP01	45	4896	4535	3/21/15	2/27/17	Contig	SC	SAMEA1572861	GCA_001145585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/585/GCA_001145585.1_8490_6_59	-	MDUST59
Staphylococcus aureus M0322	1388214	PRJNA216384	216384	Terrabacteria group	Firmicutes	2.89054	32.9	-	JCDD01	66	3088	2902	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325338	GCA_000554705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/705/GCA_000554705.1_Stap_aure_M0322_V1	-	M0322
Staphylococcus aureus M0323	1388215	PRJNA216385	216385	Terrabacteria group	Firmicutes	2.92778	32.8	-	JCDE01	61	3104	2900	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325339	GCA_000554725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/725/GCA_000554725.1_Stap_aure_M0323_V1	-	M0323
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.76154	52	-	CJTZ01	68	4932	4578	3/21/15	2/27/17	Contig	SC	SAMEA1903909	GCA_001146145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/145/GCA_001146145.1_9475_6_81	-	A33112
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.88925	37.9	-	FFGJ01	12	2917	2831	2/9/16	3/1/17	Scaffold	SC	SAMEA2383279	GCA_900034745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/745/GCA_900034745.1_12754_4_69	-	2842STDY5753857
Mycobacterium tuberculosis BTB03-142	1423437	PRJNA229218	229218	Terrabacteria group	Actinobacteria	4.40118	65.6	-	JKHF01	4	4279	4096	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414853	GCA_000677315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/315/GCA_000677315.1_Myco_tube_BTB03-142_V1	-	BTB03-142
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.93504	50.5	-	JSRQ01	33	5033	4753	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801841	GCA_000782235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/235/GCA_000782235.1_ASM78223v1	25373147	blood-09-0389
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	1.97797	39.7	-	CRGA01	46	2178	1970	3/22/15	3/11/17	Contig	SC	SAMEA1025247	GCA_001161565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/565/GCA_001161565.1_6736_5_17	-	SMRU1241
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.51666	66.3	-	NRBE01	79	6239	6093	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504783	GCA_002330885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/885/GCA_002330885.1_ASM233088v1	-	env068
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.98453	38.9	-	LZXF01	141	3875	3722	6/17/16	3/20/17	Contig	JCVI	SAMN05238705	GCA_001674845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/845/GCA_001674845.1_ASM167484v1	-	ABUH799
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.5658	57.2	-	NFZK01	102	5661	5377	6/9/17	6/12/17	Contig	JCVI	SAMN05960966	GCA_002186665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/665/GCA_002186665.1_ASM218666v1	-	MM_2436
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.48749	57.1	-	NFVU01	72	5463	5228	6/9/17	6/12/17	Contig	JCVI	SAMN05960895	GCA_002186695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/695/GCA_002186695.1_ASM218669v1	-	PO2673
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.95914	38.9	-	LZXG01	154	3850	3693	6/17/16	3/20/17	Contig	JCVI	SAMN05238706	GCA_001674865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/865/GCA_001674865.1_ASM167486v1	-	ABUH800
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	7.00783	66	-	NRBP01	102	6785	6610	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504786	GCA_002330925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/925/GCA_002330925.1_ASM233092v1	-	env091
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08415	39.6	-	CLWN01	63	2291	2074	3/21/15	3/10/17	Contig	SC	SAMEA1025874	GCA_001161665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/665/GCA_001161665.1_6983_4_94	-	SMRU2302
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.29253	50.9	-	JSRR01	100	5609	5206	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801840	GCA_000782255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/255/GCA_000782255.1_ASM78225v1	25373147	blood-09-0341
Mycobacterium tuberculosis BTB04-128	1423438	PRJNA229219	229219	Terrabacteria group	Actinobacteria	4.42073	65.5	-	JKHE01	4	4302	4121	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414854	GCA_000677335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/335/GCA_000677335.1_Myco_tube_BTB04-128_V1	-	BTB04-128
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.95376	37.8	-	FFGK01	10	3025	2938	2/9/16	3/1/17	Scaffold	SC	SAMEA2383282	GCA_900034755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/755/GCA_900034755.1_12754_4_72	-	2842STDY5753860
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.97661	52.1	-	CQGX01	55	5162	4886	3/23/15	2/27/17	Contig	SC	SAMEA1568466	GCA_001146465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/465/GCA_001146465.1_8490_2_74	-	CH31
Staphylococcus aureus M0325	1388217	PRJNA216387	216387	Terrabacteria group	Firmicutes	2.89397	32.9	-	JCDF01	56	3066	2887	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325341	GCA_000554745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/745/GCA_000554745.1_Stap_aure_M0325_V1	-	M0325
Staphylococcus aureus M0327	1388218	PRJNA216388	216388	Terrabacteria group	Firmicutes	2.8945	32.8	-	JCDG01	66	3076	2902	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325342	GCA_000554765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/765/GCA_000554765.1_Stap_aure_M0327_V1	-	M0327
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72141	52	-	CJUN01	49	4868	4507	3/21/15	2/27/17	Contig	SC	SAMEA2058232	GCA_001146645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/645/GCA_001146645.1_9870_8_19	-	2009-011935
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.10668	37.8	-	FFGM01	16	3175	3080	2/9/16	3/1/17	Scaffold	SC	SAMEA2383293	GCA_900034765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/765/GCA_900034765.1_12754_4_83	-	2842STDY5753871
Mycobacterium tuberculosis BTB04-158	1423439	PRJNA229220	229220	Terrabacteria group	Actinobacteria	4.40152	65.6	-	JKHD01	6	4290	4104	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414855	GCA_000677355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/355/GCA_000677355.1_Myco_tube_BTB04-158_V1	-	BTB04-158
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.03686	50.7	-	JSRS01	97	5290	4913	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801839	GCA_000782275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/275/GCA_000782275.1_ASM78227v1	25373147	blood-09-0249
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.16465	39.5	-	CKUI01	71	2406	2188	3/21/15	3/11/17	Contig	SC	SAMEA1025706	GCA_001161685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/685/GCA_001161685.1_6823_2_5	-	SMRU1877
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.49411	66.3	-	NRBN01	64	6260	6103	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504785	GCA_002330955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/330/955/GCA_002330955.1_ASM233095v1	-	env084
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.84071	38.9	-	LZXI01	161	3719	3565	6/17/16	3/20/17	Contig	JCVI	SAMN05238708	GCA_001674885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/885/GCA_001674885.1_ASM167488v1	-	ABUH802
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.55908	57.2	-	NFVR01	127	5672	5397	6/9/17	6/12/17	Contig	JCVI	SAMN05960872	GCA_002186705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/705/GCA_002186705.1_ASM218670v1	-	PO379
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.16452	57.5	-	NFVS01	72	5219	4976	6/9/17	6/12/17	Contig	JCVI	SAMN05960871	GCA_002186725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/725/GCA_002186725.1_ASM218672v1	-	PO343
Acinetobacter baumannii	470	PRJNA271775	271775	Proteobacteria	Gammaproteobacteria	3.8778	38.9	-	LZXK01	122	3750	3603	6/17/16	3/20/17	Contig	JCVI	SAMN05238710	GCA_001674915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/915/GCA_001674915.1_ASM167491v1	-	ABUH703
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.81467	66.1	-	NRGD01	80	6603	6430	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504822	GCA_002331985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/985/GCA_002331985.1_ASM233198v1	-	env187
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.04709	39.7	-	CMOF01	72	2257	2029	3/22/15	3/11/17	Contig	SC	SAMEA2061479	GCA_001161805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/805/GCA_001161805.1_9803_7_20	-	19F
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.27661	50.9	-	JSRT01	106	5560	5161	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801838	GCA_000782295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/295/GCA_000782295.1_ASM78229v1	25373147	blood-09-0074
Mycobacterium tuberculosis BTB04-172	1423440	PRJNA229221	229221	Terrabacteria group	Actinobacteria	4.35998	65.6	-	JKHC01	6	4251	4084	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414856	GCA_000677375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/375/GCA_000677375.1_Myco_tube_BTB04-172_V1	-	BTB04-172
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.96169	37.9	-	FFGN01	8	3033	2950	2/9/16	3/1/17	Scaffold	SC	SAMEA2383296	GCA_900034775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/775/GCA_900034775.1_12754_4_86	-	2842STDY5753874
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74221	52.1	-	CJMY01	53	4909	4543	3/21/15	2/27/17	Contig	SC	SAMEA2153970	GCA_001146725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/725/GCA_001146725.1_10607_2_9	-	1006099
Staphylococcus aureus M0331	1388219	PRJNA216389	216389	Terrabacteria group	Firmicutes	2.8891	32.8	-	JCDH01	66	3062	2902	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325343	GCA_000554785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/785/GCA_000554785.1_Stap_aure_M0331_V1	-	M0331
Staphylococcus aureus M0333	1388220	PRJNA216390	216390	Terrabacteria group	Firmicutes	2.92639	32.8	-	JCDI01	81	3102	2923	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325344	GCA_000554805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/805/GCA_000554805.1_Stap_aure_M0333_V1	-	M0333
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93241	51.8	-	CJNJ01	57	5152	4748	3/21/15	2/27/17	Contig	SC	SAMEA2156892	GCA_001146825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/825/GCA_001146825.1_10608_2_4	-	2008-007991
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.87164	37.9	-	FFGO01	6	2931	2832	2/9/16	3/1/17	Scaffold	SC	SAMEA2383301	GCA_900034785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/785/GCA_900034785.1_12754_4_91	-	2842STDY5753879
Mycobacterium tuberculosis BTB04-388	1423441	PRJNA229222	229222	Terrabacteria group	Actinobacteria	4.42485	65.5	-	JKHB01	8	4302	4101	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414857	GCA_000677395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/395/GCA_000677395.1_Myco_tube_BTB04-388_V1	-	BTB04-388
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.31341	50.5	-	JSRU01	199	5556	5084	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801837	GCA_000782315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/315/GCA_000782315.1_ASM78231v1	25373147	blood-09-0023rep2
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.01414	39.7	-	CNQC02	182	2141	1970	3/23/15	3/11/17	Contig	SC	SAMEA1032733	GCA_001161825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/825/GCA_001161825.2_6952_7_11	-	R34-3172
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.78979	66	-	NRGE01	130	6461	6275	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504819	GCA_002331995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/331/995/GCA_002331995.1_ASM233199v1	-	env169
Acinetobacter baumannii	470	PRJNA326196	326196	Proteobacteria	Gammaproteobacteria	3.96591	38.9	-	MAFT01	65	3821	3621	6/22/16	3/20/17	Contig	Institute of Experimental Medicine	SAMN05271226	GCA_001675265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/265/GCA_001675265.1_ASM167526v1	-	28
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.36555	57.3	-	NFVW01	75	5396	5147	6/9/17	6/12/17	Contig	JCVI	SAMN05960893	GCA_002186775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/775/GCA_002186775.1_ASM218677v1	-	PO2429
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.67999	57.1	-	NFVX01	116	5729	5442	6/9/17	6/12/17	Contig	JCVI	SAMN05960892	GCA_002186785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/785/GCA_002186785.1_ASM218678v1	-	PO1932
Acinetobacter baumannii	470	PRJNA326058	326058	Proteobacteria	Gammaproteobacteria	4.12381	39.8	-	MACB01	992	3683	3563	7/24/16	3/20/17	Contig	Robert Koch Institute	SAMN05257113	GCA_001693125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/125/GCA_001693125.1_ASM169312v1	-	280/1C
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.4745	66.3	-	NRGG01	278	6284	6112	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504806	GCA_002332015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/015/GCA_002332015.1_ASM233201v1	-	env135
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07126	39.6	-	CNOE02	138	2250	2022	3/23/15	3/11/17	Contig	SC	SAMEA1032581	GCA_001161865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/865/GCA_001161865.2_6925_2_75	-	R34-3056
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.41488	50.6	-	JSRW01	165	5681	5182	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801835	GCA_000782335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/335/GCA_000782335.1_ASM78233v1	25373147	blood-09-0012
Mycobacterium tuberculosis BTB04-416	1423442	PRJNA229223	229223	Terrabacteria group	Actinobacteria	4.40762	65.5	-	JKHA01	2	4290	4095	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414858	GCA_000677415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/415/GCA_000677415.1_Myco_tube_BTB04-416_V1	-	BTB04-416
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.01954	37.8	-	FFGP01	12	3121	3032	2/9/16	3/2/17	Scaffold	SC	SAMEA2383303	GCA_900034795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/795/GCA_900034795.1_12754_4_93	-	2842STDY5753881
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93226	51.8	-	CJWC01	61	5133	4746	3/21/15	2/27/17	Contig	SC	SAMEA2056496	GCA_001147885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/885/GCA_001147885.1_9870_8_8	-	2008-006312
Staphylococcus aureus M0335	1388221	PRJNA216391	216391	Terrabacteria group	Firmicutes	2.86915	32.8	-	JCDJ01	49	3030	2853	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325345	GCA_000554825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/825/GCA_000554825.1_Stap_aure_M0335_V1	-	M0335
Staphylococcus aureus M0336	1388222	PRJNA216392	216392	Terrabacteria group	Firmicutes	2.88255	32.9	-	JCDK01	51	3030	2856	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325346	GCA_000554845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/845/GCA_000554845.1_Stap_aure_M0336_V1	-	M0336
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.737	52	-	CJJJ01	41	4913	4557	3/21/15	2/27/17	Contig	SC	SAMEA1930162	GCA_001148045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/045/GCA_001148045.1_10592_2_43	-	E99-9794
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.01627	37.8	-	FFGS01	16	3080	2980	2/9/16	3/1/17	Scaffold	SC	SAMEA2383312	GCA_900034805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/805/GCA_900034805.1_12754_5_7	-	2842STDY5753890
Mycobacterium tuberculosis BTB04-452	1423443	PRJNA229224	229224	Terrabacteria group	Actinobacteria	4.40886	65.5	-	JKGZ01	11	4288	4101	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414859	GCA_000677435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/435/GCA_000677435.1_Myco_tube_BTB04-452_V1	-	BTB04-452
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.33932	50.5	-	JSRV01	163	5612	5129	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801836	GCA_000782355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/355/GCA_000782355.1_ASM78235v1	25373147	blood-09-0023rep1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07017	39.6	-	CNSR02	161	2254	2039	3/23/15	3/5/17	Contig	SC	SAMEA1032591	GCA_001162205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/205/GCA_001162205.2_6999_4_12	-	108480
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.35878	66.4	-	NRGH01	86	6053	5911	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504805	GCA_002332035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/035/GCA_002332035.1_ASM233203v1	-	env133
Acinetobacter baumannii	470	PRJNA326058	326058	Proteobacteria	Gammaproteobacteria	3.94191	39.5	-	MABV01	892	3529	3399	7/24/16	3/20/17	Contig	Robert Koch Institute	SAMN05257107	GCA_001693185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/185/GCA_001693185.1_ASM169318v1	-	8D1
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.37366	57.4	-	NFVZ01	85	5408	5144	6/9/17	6/12/17	Contig	JCVI	SAMN05960890	GCA_002186805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/805/GCA_002186805.1_ASM218680v1	-	PO1805
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.28768	57.5	-	NFVY01	56	5258	5064	6/9/17	6/12/17	Contig	JCVI	SAMN05960891	GCA_002186835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/835/GCA_002186835.1_ASM218683v1	-	PO1842
Acinetobacter baumannii	470	PRJNA326058	326058	Proteobacteria	Gammaproteobacteria	4.05282	39.4	-	MABW01	897	3626	3513	7/24/16	3/20/17	Contig	Robert Koch Institute	SAMN05257108	GCA_001693195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/195/GCA_001693195.1_ASM169319v1	-	29D2
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.87592	66	-	NRGI01	143	6724	6541	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504803	GCA_002332065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/065/GCA_002332065.1_ASM233206v1	-	env113b
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06707	39.6	-	CNXX02	140	2236	2025	3/23/15	3/11/17	Contig	SC	SAMEA1463045	GCA_001162385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/385/GCA_001162385.2_7553_4_19	-	ND6140
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.23351	50.5	-	JSRX01	105	5410	5032	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801834	GCA_000782375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/375/GCA_000782375.1_ASM78237v1	25373147	blood-08-1636
Mycobacterium tuberculosis BTB05-001	1423444	PRJNA229225	229225	Terrabacteria group	Actinobacteria	4.42866	65.6	-	JKGY01	5	4297	4095	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414860	GCA_000677455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/455/GCA_000677455.1_Myco_tube_BTB05-001_V1	-	BTB05-001
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.00303	37.8	-	FFGT01	14	3066	2977	2/9/16	3/1/17	Scaffold	SC	SAMEA2383315	GCA_900034815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/815/GCA_900034815.1_12754_5_10	-	2842STDY5753893
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70406	52.1	-	CJUA01	47	4869	4510	3/21/15	2/27/17	Contig	SC	SAMEA1903915	GCA_001148265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/265/GCA_001148265.1_9475_6_85	-	A40201
Staphylococcus aureus M0337	1388223	PRJNA216393	216393	Terrabacteria group	Firmicutes	2.9603	32.7	-	JCDL01	86	3198	3007	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325347	GCA_000554865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/865/GCA_000554865.1_Stap_aure_M0337_V1	-	M0337
Staphylococcus aureus M0338	1388224	PRJNA216394	216394	Terrabacteria group	Firmicutes	2.90236	32.8	-	JCDM01	67	3081	2904	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325348	GCA_000554885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/885/GCA_000554885.1_Stap_aure_M0338_V1	-	M0338
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.76854	52.1	-	CJYZ01	46	4932	4572	3/21/15	2/27/17	Contig	SC	SAMEA2056537	GCA_001148345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/345/GCA_001148345.1_9953_5_81	-	LNT279
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.90091	37.9	-	FFGW01	9	2947	2854	2/9/16	3/1/17	Scaffold	SC	SAMEA2383320	GCA_900034825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/825/GCA_900034825.1_12754_5_15	-	2842STDY5753898
Mycobacterium tuberculosis BTB05-013	1423445	PRJNA229226	229226	Terrabacteria group	Actinobacteria	4.41348	65.5	-	JKGX01	6	4283	4113	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414861	GCA_000677475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/475/GCA_000677475.1_Myco_tube_BTB05-013_V1	-	BTB05-013
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.45391	50.5	-	JSRY01	160	5762	5352	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801833	GCA_000782395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/395/GCA_000782395.1_ASM78239v1	25373147	blood-08-1563rep2
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.0964	39.7	-	CMNM01	72	2323	2103	3/22/15	3/4/17	Contig	SC	SAMEA1029272	GCA_001162505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/505/GCA_001162505.1_7092_6_24	-	SMRU3120
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	7.14249	65.9	-	NRGJ01	92	7006	6787	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504801	GCA_002332085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/085/GCA_002332085.1_ASM233208v1	-	env110b
Acinetobacter baumannii	470	PRJNA326058	326058	Proteobacteria	Gammaproteobacteria	3.83077	39.3	-	MABX01	575	3471	3341	7/24/16	3/20/17	Contig	Robert Koch Institute	SAMN05257109	GCA_001693205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/205/GCA_001693205.1_ASM169320v1	-	31D1
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.46472	57.3	-	NFWB01	55	5494	5262	6/9/17	6/12/17	Contig	JCVI	SAMN05960888	GCA_002186855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/855/GCA_002186855.1_ASM218685v1	-	PO1659
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.42923	57.2	-	NFWD01	73	5447	5204	6/9/17	6/12/17	Contig	JCVI	SAMN05960886	GCA_002186865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/865/GCA_002186865.1_ASM218686v1	-	PO1516
Acinetobacter baumannii	470	PRJNA308422	308422	Proteobacteria	Gammaproteobacteria	3.99176	39.1	-	LJHA01	64	3856	3709	8/18/16	4/6/17	Contig	CHU A Coruna	SAMN04038509	GCA_001708025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/025/GCA_001708025.1_ASM170802v1	28328989	ST-2_clon_2000
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.43699	66.5	-	NRGK01	85	6124	5985	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504796	GCA_002332095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/095/GCA_002332095.1_ASM233209v1	-	env105
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.17021	39.5	-	CRSS01	90	2427	2170	3/23/15	3/11/17	Contig	SC	SAMEA1025462	GCA_001162565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/565/GCA_001162565.1_6805_3_19	-	SMRU1459
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.43079	50.5	-	JSRZ01	140	5737	5306	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801832	GCA_000782415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/415/GCA_000782415.1_ASM78241v1	25373147	blood-08-1563rep1
Mycobacterium tuberculosis BTB05-285	1423446	PRJNA229227	229227	Terrabacteria group	Actinobacteria	4.41618	65.6	-	JKGW01	8	4301	4101	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414862	GCA_000677495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/495/GCA_000677495.1_Myco_tube_BTB05-285_V1	-	BTB05-285
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.01109	37.9	-	FFGY01	14	3109	3018	2/9/16	3/1/17	Scaffold	SC	SAMEA2383330	GCA_900034835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/835/GCA_900034835.1_12754_5_25	-	2842STDY5753908
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93198	51.8	-	CJUG01	61	5132	4746	3/21/15	2/27/17	Contig	SC	SAMEA2058076	GCA_001148805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/805/GCA_001148805.1_9870_8_1	-	2008-001909
Staphylococcus aureus M0339	1388225	PRJNA216395	216395	Terrabacteria group	Firmicutes	2.86237	32.8	-	JCDN01	34	3003	2841	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325349	GCA_000554905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/905/GCA_000554905.1_Stap_aure_M0339_V1	-	M0339
Staphylococcus aureus M0341	1388226	PRJNA216396	216396	Terrabacteria group	Firmicutes	2.83281	32.8	-	JCDO01	48	2964	2790	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325350	GCA_000554925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/925/GCA_000554925.1_Stap_aure_M0341_V1	-	M0341
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.95185	51.8	-	CIWD01	63	5140	4756	3/21/15	2/27/17	Contig	SC	SAMEA2064356	GCA_001148845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/845/GCA_001148845.1_10209_5_7	-	2007-005516
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.00129	37.8	-	FFHC01	10	3062	2975	2/9/16	3/1/17	Scaffold	SC	SAMEA2383339	GCA_900034845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/845/GCA_900034845.1_12754_5_34	-	2842STDY5753917
Mycobacterium tuberculosis BTB05-348	1423447	PRJNA229228	229228	Terrabacteria group	Actinobacteria	4.41137	65.6	-	JKGV01	65	4324	4093	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414863	GCA_000677515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/515/GCA_000677515.1_Myco_tube_BTB05-348_V1	-	BTB05-348
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.31719	50.5	-	JSSA01	155	5601	5052	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801831	GCA_000782435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/435/GCA_000782435.1_ASM78243v1	25373147	blood-08-1562
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12112	39.6	-	CLAZ01	47	2324	2098	3/21/15	3/11/17	Contig	SC	SAMEA1025162	GCA_001162625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/625/GCA_001162625.1_6841_7_21	-	SMRU1341
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.5846	66.2	-	NRGL01	218	6386	6191	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504789	GCA_002332125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/125/GCA_002332125.1_ASM233212v1	-	env097
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	3.74431	39.7	-	MANO01	1042	3648	3354	10/12/16	3/20/17	Contig	University of Sao Paulo	SAMN04549246	GCA_001756815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/815/GCA_001756815.1_ASM175681v1	-	LIM3705
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.24133	57.5	-	NFWF01	119	5288	4948	6/9/17	6/12/17	Contig	JCVI	SAMN05960884	GCA_002186895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/895/GCA_002186895.1_ASM218689v1	-	PO1380
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.29671	57.5	-	NFWI01	64	5233	5023	6/9/17	6/12/17	Contig	JCVI	SAMN05960965	GCA_002186935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/935/GCA_002186935.1_ASM218693v1	-	MM_MK_620
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	3.62777	39.7	-	MANM01	1003	3479	3220	10/12/16	3/20/17	Contig	University of Sao Paulo	SAMN04549245	GCA_001758065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/065/GCA_001758065.1_ASM175806v1	-	LIM3689
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.33894	66.5	-	NRGF01	76	6030	5899	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504810	GCA_002332135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/135/GCA_002332135.1_ASM233213v1	-	env140
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.01174	39.6	-	CNTQ02	113	2178	1994	3/23/15	3/11/17	Contig	SC	SAMEA1032693	GCA_001162665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/665/GCA_001162665.2_6999_4_9	-	102720
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.05643	50.6	-	JSSB01	170	5204	4848	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801830	GCA_000782455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/455/GCA_000782455.1_ASM78245v1	25373147	blood-08-1493
Mycobacterium tuberculosis BTB05-371	1423448	PRJNA229229	229229	Terrabacteria group	Actinobacteria	4.41175	65.6	-	JKGU01	2	4273	4109	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414864	GCA_000677535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/535/GCA_000677535.1_Myco_tube_BTB05-371_V1	-	BTB05-371
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.88224	37.9	-	FFHI01	9	2910	2816	2/9/16	3/1/17	Scaffold	SC	SAMEA2383361	GCA_900034855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/855/GCA_900034855.1_12754_5_56	-	2842STDY5753939
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71651	52.1	-	CJJY01	50	4905	4524	3/21/15	2/27/17	Contig	SC	SAMEA1929449	GCA_001149025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/025/GCA_001149025.1_10592_2_7	-	3802
Staphylococcus aureus M0342	1388227	PRJNA216397	216397	Terrabacteria group	Firmicutes	2.85666	32.9	-	JCDP01	44	2989	2811	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325351	GCA_000554945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/945/GCA_000554945.1_Stap_aure_M0342_V1	-	M0342
Staphylococcus aureus M0344	1388228	PRJNA216398	216398	Terrabacteria group	Firmicutes	2.87285	32.8	-	JCDQ01	35	3024	2852	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325352	GCA_000554965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/965/GCA_000554965.1_Stap_aure_M0344_V1	-	M0344
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82048	51.9	-	CJWO01	44	5009	4635	3/21/15	2/27/17	Contig	SC	SAMEA2055635	GCA_001149145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/145/GCA_001149145.1_9870_8_9	-	2005-008425
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.97101	37.9	-	FFHJ01	8	3008	2918	2/9/16	3/1/17	Scaffold	SC	SAMEA2383363	GCA_900034865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/865/GCA_900034865.1_12754_5_58	-	2842STDY5753941
Mycobacterium tuberculosis BTB03-143	1423449	PRJNA229230	229230	Terrabacteria group	Actinobacteria	4.42528	65.5	-	JKGT01	10	4296	4102	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414865	GCA_000677555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/555/GCA_000677555.1_Myco_tube_BTB03-143_V1	-	BTB03-143
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.13544	50.6	-	JSSC01	101	5270	4906	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801829	GCA_000782475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/475/GCA_000782475.1_ASM78247v1	25373147	blood-08-1487
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11449	39.7	-	CMSB01	71	2355	2137	3/23/15	3/11/17	Contig	SC	SAMEA2062388	GCA_001162785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/785/GCA_001162785.1_9803_8_63	-	6A
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.97038	65.9	-	NRGM01	102	6821	6640	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504779	GCA_002332165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/165/GCA_002332165.1_ASM233216v1	-	env051b
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	3.6667	39.8	-	MANN01	1097	3586	3289	10/12/16	3/20/17	Contig	University of Sao Paulo	SAMN04549250	GCA_001758085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/085/GCA_001758085.1_ASM175808v1	-	LIM3695
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.62124	57.1	-	NFWH01	148	5756	5474	6/9/17	6/12/17	Contig	JCVI	SAMN05960882	GCA_002186945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/945/GCA_002186945.1_ASM218694v1	-	PO1238
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.16948	57.7	-	NFWK01	43	5115	4913	6/9/17	6/12/17	Contig	JCVI	SAMN05960962	GCA_002186995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/186/995/GCA_002186995.1_ASM218699v1	-	HB_Z_2591
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	3.84526	39.6	-	MANP01	1104	3719	3438	10/12/16	3/20/17	Contig	University of Sao Paulo	SAMN04549248	GCA_001758125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/125/GCA_001758125.1_ASM175812v1	-	LIM3732
Pseudomonas aeruginosa	287	PRJNA393338	393338	Proteobacteria	Gammaproteobacteria	6.65977	66.1	-	NRGN01	128	6430	6235	9/21/17	9/23/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07504787	GCA_002332175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/175/GCA_002332175.1_ASM233217v1	-	env092a
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.03814	39.7	-	CNTM02	126	2228	2028	3/23/15	3/11/17	Contig	SC	SAMEA1032529	GCA_001162885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/885/GCA_001162885.2_6999_4_18	-	132571
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.07607	50.8	-	JSSD01	67	5273	4893	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801828	GCA_000782495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/495/GCA_000782495.1_ASM78249v1	25373147	blood-08-1463
Mycobacterium tuberculosis BTB05-650	1423450	PRJNA229231	229231	Terrabacteria group	Actinobacteria	4.37783	65.6	-	JKGS01	61	4293	4102	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414866	GCA_000677575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/575/GCA_000677575.1_Myco_tube_BTB05-650_V1	-	BTB05-650
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.87119	37.9	-	FFHP01	6	2925	2839	2/9/16	3/1/17	Scaffold	SC	SAMEA2383372	GCA_900034875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/875/GCA_900034875.1_12754_5_67	-	2842STDY5753951
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93425	51.8	-	CJUX01	56	5136	4756	3/21/15	2/27/17	Contig	SC	SAMEA2055644	GCA_001149445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/445/GCA_001149445.1_9870_8_36	-	2010-010162
Staphylococcus aureus M0345	1388229	PRJNA216399	216399	Terrabacteria group	Firmicutes	2.90198	32.9	-	JCDR01	30	3057	2887	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325353	GCA_000554985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/554/985/GCA_000554985.1_Stap_aure_M0345_V1	-	M0345
Staphylococcus aureus M0346	1388230	PRJNA216400	216400	Terrabacteria group	Firmicutes	2.84794	32.8	-	JCDS01	40	3003	2822	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325354	GCA_000555005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/005/GCA_000555005.1_Stap_aure_M0346_V1	-	M0346
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93231	51.8	-	CJUZ01	56	5125	4740	3/21/15	2/27/17	Contig	SC	SAMEA2058420	GCA_001150125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/125/GCA_001150125.1_9870_8_34	-	2010-002605
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.01085	37.9	-	FFHM01	14	3113	3020	2/9/16	3/1/17	Scaffold	SC	SAMEA2383380	GCA_900034885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/885/GCA_900034885.1_12754_5_75	-	2842STDY5753959
Mycobacterium tuberculosis BTB05-660	1423451	PRJNA229232	229232	Terrabacteria group	Actinobacteria	4.42226	65.6	-	JKGR01	7	4305	4120	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414867	GCA_000677595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/595/GCA_000677595.1_Myco_tube_BTB05-660_V1	-	BTB05-660
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.06227	50.7	-	JSSE01	95	5259	4896	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801827	GCA_000782515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/515/GCA_000782515.1_ASM78251v1	25373147	blood-08-1462
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12975	39.6	-	CLTY01	54	2281	1991	3/21/15	3/11/17	Contig	SC	SAMEA1029071	GCA_001162985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/985/GCA_001162985.1_6972_5_20	-	type strain: N
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	3.71416	39.7	-	MANL01	1063	3634	3321	10/12/16	3/20/17	Contig	University of Sao Paulo	SAMN04549244	GCA_001758135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/135/GCA_001758135.1_ASM175813v1	-	LIM941
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.19777	57.4	-	NFWN01	36	5188	4990	6/9/17	6/12/17	Contig	JCVI	SAMN05960960	GCA_002187015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/015/GCA_002187015.1_ASM218701v1	-	HB_2044
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.63869	57	-	NFWP01	91	5656	5379	6/9/17	6/12/17	Contig	JCVI	SAMN05960915	GCA_002187025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/025/GCA_002187025.1_ASM218702v1	-	G749
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	3.89234	39.5	-	MANR01	609	3835	3579	10/12/16	3/20/17	Contig	University of Sao Paulo	SAMN04549249	GCA_001758165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/165/GCA_001758165.1_ASM175816v1	-	LIM3756
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.0895	39.5	-	CMQT01	78	2293	2048	3/23/15	3/10/17	Contig	SC	SAMEA1970464	GCA_001163245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/245/GCA_001163245.1_9803_8_25	-	29
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.05013	50.8	-	JSSF01	86	5244	4910	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801826	GCA_000782535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/535/GCA_000782535.1_ASM78253v1	25373147	blood-08-1447
Mycobacterium tuberculosis BTB06-001	1423452	PRJNA229233	229233	Terrabacteria group	Actinobacteria	4.40555	65.5	-	JKGQ01	2	4264	4100	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414868	GCA_000677615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/615/GCA_000677615.1_Myco_tube_BTB06-001_V1	-	BTB06-001
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.96338	37.9	-	FFHV01	11	3033	2949	2/9/16	3/1/17	Scaffold	SC	SAMEA2383392	GCA_900034895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/895/GCA_900034895.1_12754_5_87	-	2842STDY5753971
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71811	52	-	CJMH01	77	4885	4509	3/21/15	2/27/17	Contig	SC	SAMEA2161101	GCA_001150445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/445/GCA_001150445.1_10607_1_96	-	2012-017695
Staphylococcus aureus M0348	1388231	PRJNA216401	216401	Terrabacteria group	Firmicutes	2.92291	32.8	-	JCDT01	56	3086	2888	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325355	GCA_000555025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/025/GCA_000555025.1_Stap_aure_M0348_V1	-	M0348
Staphylococcus aureus M0349	1388232	PRJNA216402	216402	Terrabacteria group	Firmicutes	2.89561	32.8	-	JCDU01	49	3064	2881	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325356	GCA_000555045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/045/GCA_000555045.1_Stap_aure_M0349_V1	-	M0349
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93331	51.8	-	CIUO01	58	5118	4738	3/21/15	2/27/17	Contig	SC	SAMEA2064354	GCA_001151665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/665/GCA_001151665.1_10209_5_1	-	2007-001525
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.16391	37.8	-	FFFO01	298	3180	3043	2/9/16	3/1/17	Scaffold	SC	SAMEA2383373	GCA_900035185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/185/GCA_900035185.1_12754_5_68	-	2842STDY5753952
Mycobacterium tuberculosis BTB06-340	1423453	PRJNA229234	229234	Terrabacteria group	Actinobacteria	4.41243	65.5	-	JKGP01	5	4302	4115	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414869	GCA_000677635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/635/GCA_000677635.1_Myco_tube_BTB06-340_V1	-	BTB06-340
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.13687	50.8	-	JSSG01	83	5348	4949	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801825	GCA_000782555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/555/GCA_000782555.1_ASM78255v1	25373147	blood-08-1420
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12338	39.6	-	CMOL01	105	2349	2122	3/23/15	3/11/17	Contig	SC	SAMEA2061706	GCA_001163265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/265/GCA_001163265.1_9803_7_32	-	6C
Acinetobacter baumannii	470	PRJNA349064	349064	Proteobacteria	Gammaproteobacteria	4.14278	38.9	-	MLYW01	34	4016	3837	10/26/16	3/20/17	Contig	Ningbo First Hospital	SAMN05919682	GCA_001855175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/175/GCA_001855175.1_ASM185517v1	-	WA2859
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.78661	56.8	-	NFWR01	161	5863	5521	6/9/17	6/12/17	Contig	JCVI	SAMN05960946	GCA_002187055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/055/GCA_002187055.1_ASM218705v1	-	G4749
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.80137	56.8	-	NFWS01	174	5887	5527	6/9/17	6/12/17	Contig	JCVI	SAMN05960945	GCA_002187065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/065/GCA_002187065.1_ASM218706v1	-	G4747
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.98549	38.8	-	LYKO01	43	3790	3656	11/2/16	3/20/17	Contig	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745410	GCA_001863745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/745/GCA_001863745.1_ASM186374v1	-	XH641
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06626	39.5	-	CNYY02	184	2208	2015	3/23/15	3/5/17	Contig	SC	SAMEA1463162	GCA_001163325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/325/GCA_001163325.2_7553_4_9	-	ND6121
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.34063	50.5	-	JSSH01	96	5543	5137	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801824	GCA_000782575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/575/GCA_000782575.1_ASM78257v1	25373147	blood-08-1415
Mycobacterium tuberculosis BTB06-467	1423454	PRJNA229235	229235	Terrabacteria group	Actinobacteria	4.44915	65.5	-	JKGO01	4	4314	4093	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414870	GCA_000677655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/655/GCA_000677655.1_Myco_tube_BTB06-467_V1	-	BTB06-467
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.93083	37.9	-	FFGF01	13	2980	2882	2/9/16	3/1/17	Scaffold	SC	SAMEA2383413	GCA_900035195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/195/GCA_900035195.1_12673_8_35	-	2842STDY5753992
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93195	51.8	-	CJVZ01	60	5113	4737	3/21/15	2/27/17	Contig	SC	SAMEA2055776	GCA_001151945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/945/GCA_001151945.1_9870_8_75	-	2012-007197
Staphylococcus aureus M0353	1388233	PRJNA216403	216403	Terrabacteria group	Firmicutes	2.88813	32.8	-	JCDV01	76	3062	2932	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325357	GCA_000555065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/065/GCA_000555065.1_Stap_aure_M0353_V1	-	M0353
Staphylococcus aureus M0355	1388235	PRJNA216405	216405	Terrabacteria group	Firmicutes	2.87703	32.8	-	JCDW01	76	3078	2888	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325359	GCA_000555085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/085/GCA_000555085.1_Stap_aure_M0355_V1	-	M0355
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.68029	52.1	-	CJLF01	44	4850	4481	3/21/15	2/27/17	Contig	SC	SAMEA1930192	GCA_001151985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/985/GCA_001151985.1_10593_2_67	-	E02-1536
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.92478	37.8	-	FFGU01	11	2990	2906	2/9/16	3/1/17	Scaffold	SC	SAMEA2383326	GCA_900035205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/205/GCA_900035205.1_12754_5_21	-	2842STDY5753904
Mycobacterium tuberculosis BTB06-494	1423455	PRJNA229236	229236	Terrabacteria group	Actinobacteria	4.40009	65.6	-	JKGN01	67	4305	4097	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414871	GCA_000677675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/675/GCA_000677675.1_Myco_tube_BTB06-494_V1	-	BTB06-494
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.06543	50.8	-	JSSI01	86	5278	4881	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801823	GCA_000782595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/595/GCA_000782595.1_ASM78259v1	25373147	blood-08-1414
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99126	39.7	-	CQRH01	41	2211	1987	3/23/15	3/4/17	Contig	SC	SAMEA970226	GCA_001163565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/565/GCA_001163565.1_5159_8_8	-	BHN651
Acinetobacter baumannii	470	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	4.10228	39	-	MPBY01	7	3942	3694	11/10/16	3/20/17	Contig	Centers for Disease Control and Prevention	SAMN04014877	GCA_001874685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/685/GCA_001874685.1_ASM187468v1	-	AR_0036
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.79961	56.8	-	NFWT01	172	5882	5526	6/9/17	6/12/17	Contig	JCVI	SAMN05960944	GCA_002187095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/095/GCA_002187095.1_ASM218709v1	-	G4731
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.56606	57.1	-	NFWU01	88	5613	5347	6/9/17	6/12/17	Contig	JCVI	SAMN05960943	GCA_002187105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/105/GCA_002187105.1_ASM218710v1	-	G4730
Acinetobacter baumannii	470	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	4.06979	39	-	MPBX01	26	3914	3661	11/10/16	3/20/17	Contig	Centers for Disease Control and Prevention	SAMN04014878	GCA_001874765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/765/GCA_001874765.1_ASM187476v1	-	AR_0037
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.16576	39.5	-	CKQR01	38	2413	2169	3/21/15	3/4/17	Contig	SC	SAMEA1024773	GCA_001163585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/585/GCA_001163585.1_6680_6_5	-	SMRU941
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.07704	50.8	-	JSSJ01	76	5275	4907	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801822	GCA_000782615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/615/GCA_000782615.1_ASM78261v1	25373147	blood-08-1318
Mycobacterium tuberculosis BTB07-001	1423456	PRJNA229237	229237	Terrabacteria group	Actinobacteria	4.42235	65.5	-	JKGM01	11	4293	4118	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414872	GCA_000677695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/695/GCA_000677695.1_Myco_tube_BTB07-001_V1	-	BTB07-001
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.01073	37.9	-	FFGV01	14	3117	3018	2/9/16	3/1/17	Scaffold	SC	SAMEA2383328	GCA_900035215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/215/GCA_900035215.1_12754_5_23	-	2842STDY5753906
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73342	52	-	CJXX01	54	4890	4532	3/21/15	2/27/17	Contig	SC	SAMEA2057240	GCA_001152465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/465/GCA_001152465.1_9953_5_5	-	A271
Staphylococcus aureus M0356	1388236	PRJNA216406	216406	Terrabacteria group	Firmicutes	2.87313	32.8	-	JCDX01	44	3035	2875	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325360	GCA_000555105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/105/GCA_000555105.1_Stap_aure_M0356_V1	-	M0356
Staphylococcus aureus M0357	1388237	PRJNA216407	216407	Terrabacteria group	Firmicutes	2.89409	32.9	-	JCDY01	56	3056	2887	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325361	GCA_000555125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/125/GCA_000555125.1_Stap_aure_M0357_V1	-	M0357
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74255	52.1	-	CIVG01	42	4921	4569	3/21/15	2/27/17	Contig	SC	SAMEA1967987	GCA_001152505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/505/GCA_001152505.1_10209_5_24	-	LNT22
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.90113	37.9	-	FFHG01	10	2954	2853	2/9/16	3/1/17	Scaffold	SC	SAMEA2383355	GCA_900035225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/225/GCA_900035225.1_12754_5_50	-	2842STDY5753933
Mycobacterium tuberculosis BTB07-034	1423457	PRJNA229238	229238	Terrabacteria group	Actinobacteria	4.40448	65.6	-	JKGL01	8	4282	4114	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414873	GCA_000677715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/715/GCA_000677715.1_Myco_tube_BTB07-034_V1	-	BTB07-034
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.22796	50.7	-	JSSK01	107	5506	5077	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801821	GCA_000782635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/635/GCA_000782635.1_ASM78263v1	25373147	blood-08-1203
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.03713	39.7	-	CKLW01	61	2283	2050	3/21/15	3/4/17	Contig	SC	SAMEA1888677	GCA_001163705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/705/GCA_001163705.1_6649_7_13	-	SMRU541
Acinetobacter baumannii	470	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	4.09754	39	-	MPCA01	20	3946	3713	11/10/16	3/20/17	Contig	Centers for Disease Control and Prevention	SAMN04014874	GCA_001874885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/885/GCA_001874885.1_ASM187488v1	-	AR_0033
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.79774	56.8	-	NFWV01	181	5867	5527	6/9/17	6/12/17	Contig	JCVI	SAMN05960942	GCA_002187135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/135/GCA_002187135.1_ASM218713v1	-	G4717
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.5849	57.2	-	NFWW01	108	5689	5408	6/9/17	6/12/17	Contig	JCVI	SAMN05960941	GCA_002187145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/145/GCA_002187145.1_ASM218714v1	-	G4712
Acinetobacter baumannii	470	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	4.13875	39.1	-	MPBZ01	5	3988	3790	11/10/16	3/20/17	Contig	Centers for Disease Control and Prevention	SAMN04014876	GCA_001874915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/915/GCA_001874915.1_ASM187491v1	-	AR_0035
Pseudomonas aeruginosa	287	PRJEB8749	279476	Proteobacteria	Gammaproteobacteria	6.48523	66.3	-	CVON01	77	6169	6015	4/30/15	3/19/17	Contig	CARDIFF UNIVERSITY	SAMEA3301018	GCA_900005845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/005/845/GCA_900005845.1_201_Pa14_contigs_500	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00542	39.7	-	COEO02	107	2180	1980	3/23/15	3/11/17	Contig	SC	SAMEA1463203	GCA_001163725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/725/GCA_001163725.2_7622_5_57	-	MD5070
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.23853	50.7	-	JSSL01	100	5509	5092	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801820	GCA_000782655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/655/GCA_000782655.1_ASM78265v1	25373147	blood-08-0997
Mycobacterium tuberculosis BTB07-070	1423458	PRJNA229239	229239	Terrabacteria group	Actinobacteria	4.41291	65.5	-	JKGK01	7	4284	4114	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414874	GCA_000677735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/735/GCA_000677735.1_Myco_tube_BTB07-070_V1	-	BTB07-070
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.95685	37.9	-	FFHL01	11	3018	2919	2/9/16	3/1/17	Scaffold	SC	SAMEA2383370	GCA_900035235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/235/GCA_900035235.1_12754_5_65	-	2842STDY5753948
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.77955	52.1	-	CIUM01	47	4974	4622	3/21/15	2/27/17	Contig	SC	SAMEA2064353	GCA_001153585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/585/GCA_001153585.1_10071_8_93	-	2010K-0535
Staphylococcus aureus M0359	1388239	PRJNA216409	216409	Terrabacteria group	Firmicutes	2.84398	32.8	-	JCDZ01	72	2986	2800	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325363	GCA_000555145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/145/GCA_000555145.1_Stap_aure_M0359_V1	-	M0359
Staphylococcus aureus M0360	1388240	PRJNA216410	216410	Terrabacteria group	Firmicutes	2.90577	32.9	-	JCEA01	69	3096	2912	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325364	GCA_000555165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/165/GCA_000555165.1_Stap_aure_M0360_V1	-	M0360
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71699	52.1	-	CJIT01	43	4866	4503	3/21/15	2/27/17	Contig	SC	SAMEA1929450	GCA_001153605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/605/GCA_001153605.1_10592_2_21	-	4180
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.91924	37.9	-	FFHW01	11	2984	2875	2/9/16	3/1/17	Scaffold	SC	SAMEA2383396	GCA_900035245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/245/GCA_900035245.1_12754_5_91	-	2842STDY5753975
Mycobacterium tuberculosis BTB07-123	1423459	PRJNA229240	229240	Terrabacteria group	Actinobacteria	4.37339	65.6	-	JKGJ01	7	4263	4082	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414875	GCA_000677755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/755/GCA_000677755.1_Myco_tube_BTB07-123_V1	-	BTB07-123
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.47183	50.7	-	JSSM01	139	5831	5385	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801819	GCA_000782675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/675/GCA_000782675.1_ASM78267v1	25373147	blood-08-0921
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.98772	39.8	-	COBP02	155	2147	1930	3/23/15	3/6/17	Contig	SC	SAMEA1463237	GCA_001163845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/845/GCA_001163845.2_7622_2_43	-	BR1116
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.61604	66.4	-	FRFZ01	84	6291	6128	12/9/16	3/20/17	Contig	DTU	SAMEA2357424	GCA_900143755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/755/GCA_900143755.1_23	-	-
Acinetobacter baumannii	470	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	4.09526	39.2	-	MPBW01	15	3980	3723	11/10/16	3/20/17	Contig	Centers for Disease Control and Prevention	SAMN04014886	GCA_001874945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/945/GCA_001874945.1_ASM187494v1	-	AR_0045
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.48115	57.3	-	NFXA01	66	5473	5226	6/9/17	6/12/17	Contig	JCVI	SAMN05960937	GCA_002187185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/185/GCA_002187185.1_ASM218718v1	-	G4605
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.59832	57.2	-	NFXH01	98	5692	5421	6/9/17	6/12/17	Contig	JCVI	SAMN05960928	GCA_002187245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/245/GCA_002187245.1_ASM218724v1	-	G3704
Acinetobacter baumannii	470	PRJNA354075	354075	Proteobacteria	Gammaproteobacteria	4.1041	38.8	-	MPPK01	24	3909	3745	12/8/16	3/20/17	Contig	CBIB-UNAL Colombia NIH Friburg University	SAMN06041134	GCA_001891205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/205/GCA_001891205.1_ASM189120v1	-	RB-1399
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.74143	66.1	-	FRFV01	164	6533	6299	12/9/16	3/20/17	Contig	DTU	SAMEA2357316	GCA_900143765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/765/GCA_900143765.1_14	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12376	39.5	-	CRKY01	75	2337	2099	3/23/15	3/4/17	Contig	SC	SAMEA1025533	GCA_001163885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/885/GCA_001163885.1_6753_4_24	-	SMRU1560
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.19854	50.6	-	JSSN01	80	5415	5047	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801818	GCA_000782695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/695/GCA_000782695.1_ASM78269v1	25373147	blood-08-0654
Mycobacterium tuberculosis BTB07-126	1423460	PRJNA229241	229241	Terrabacteria group	Actinobacteria	4.4091	65.5	-	JKGI01	4	4282	4114	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414876	GCA_000677775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/775/GCA_000677775.1_Myco_tube_BTB07-126_V1	-	BTB07-126
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.9208	37.9	-	FFHH01	16	2983	2892	2/9/16	3/1/17	Scaffold	SC	SAMEA2383359	GCA_900035495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/495/GCA_900035495.1_12754_5_54	-	2842STDY5753937
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7256	52	-	CIVR01	49	4891	4520	3/21/15	2/27/17	Contig	SC	SAMEA2064548	GCA_001154025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/025/GCA_001154025.1_10209_5_43	-	UI2155
Staphylococcus aureus M0361	1388241	PRJNA216411	216411	Terrabacteria group	Firmicutes	2.89267	32.8	-	JCEB01	69	3069	2894	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325365	GCA_000555185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/185/GCA_000555185.1_Stap_aure_M0361_V1	-	M0361
Staphylococcus aureus M0362	1388242	PRJNA216412	216412	Terrabacteria group	Firmicutes	2.89612	32.8	-	JCEC01	62	3060	2884	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325366	GCA_000555205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/205/GCA_000555205.1_Stap_aure_M0362_V1	-	M0362
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93135	51.8	-	CJLY01	60	5114	4739	3/21/15	2/27/17	Contig	SC	SAMEA2144321	GCA_001154125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/125/GCA_001154125.1_10607_1_69	-	2011-009404
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.00691	37.8	-	FFHN01	15	3068	2982	2/9/16	3/2/17	Scaffold	SC	SAMEA2383374	GCA_900035505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/505/GCA_900035505.1_12754_5_69	-	2842STDY5753953
Mycobacterium tuberculosis BTB03-144	1423461	PRJNA229242	229242	Terrabacteria group	Actinobacteria	4.41691	65.6	-	JKGH01	3	4287	4123	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414877	GCA_000677795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/795/GCA_000677795.1_Myco_tube_BTB03-144_V1	-	BTB03-144
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.46763	50.6	-	JSSO01	127	5833	5386	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801817	GCA_000782715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/715/GCA_000782715.1_ASM78271v1	25373147	blood-08-0632
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.05682	39.7	-	CMSO01	56	2246	2020	3/22/15	3/4/17	Contig	SC	SAMEA2062395	GCA_001164005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/005/GCA_001164005.1_9803_8_75	-	17F
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.73798	66.2	-	FRFU01	141	6510	6298	12/9/16	3/20/17	Contig	DTU	SAMEA2357302	GCA_900143775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/775/GCA_900143775.1_13	-	-
Acinetobacter baumannii	470	PRJDB5156	344384	Proteobacteria	Gammaproteobacteria	4.07197	38.8	-	BDHK01	192	3935	3754	9/22/16	3/20/17	Contig	"Department of Bacteriology, Osaka City University Graduate School of Medicine"	SAMD00059694	GCA_001895125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/895/125/GCA_001895125.1_ASM189512v1	-	OCU_Ac16a
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.65593	57	-	NFXF01	75	5660	5384	6/9/17	6/12/17	Contig	JCVI	SAMN05960930	GCA_002187255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/255/GCA_002187255.1_ASM218725v1	-	G4348
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.43603	57.2	-	NFXI01	78	5445	5210	6/9/17	6/12/17	Contig	JCVI	SAMN05960927	GCA_002187295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/295/GCA_002187295.1_ASM218729v1	-	G3504
Acinetobacter baumannii	470	PRJNA325353	325353	Proteobacteria	Gammaproteobacteria	3.91388	39	-	LZYR01	158	3750	3599	12/16/16	3/21/17	Contig	University of Aberdeen	SAMN05229954	GCA_001907125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/125/GCA_001907125.1_ASM190712v1	-	CRO2
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.74208	66.1	-	FRFN01	130	6520	6304	12/9/16	5/22/17	Contig	DTU	SAMEA2357536	GCA_900143785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/785/GCA_900143785.1_34	-	-
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04232	39.7	-	CKCR01	78	2248	2038	3/21/15	3/10/17	Contig	SC	SAMEA1024082	GCA_001164245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/245/GCA_001164245.1_6593_5_11	-	19F
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.31629	50.6	-	JSSP01	99	5543	5166	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801816	GCA_000782735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/735/GCA_000782735.1_ASM78273v1	25373147	blood-08-0493
Mycobacterium tuberculosis BTB07-170	1423462	PRJNA229243	229243	Terrabacteria group	Actinobacteria	4.42384	65.5	-	JKGG01	3	4294	4103	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414878	GCA_000677815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/815/GCA_000677815.1_Myco_tube_BTB07-170_V1	-	BTB07-170
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.01092	37.9	-	FFHR01	12	3112	3019	2/9/16	3/1/17	Scaffold	SC	SAMEA2383384	GCA_900035515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/515/GCA_900035515.1_12754_5_79	-	2842STDY5753963
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.80324	52.1	-	CJYH01	39	4984	4616	3/21/15	2/27/17	Contig	SC	SAMEA2056531	GCA_001154205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/205/GCA_001154205.1_9953_5_63	-	KM1648
Staphylococcus aureus M0368	1388244	PRJNA216414	216414	Terrabacteria group	Firmicutes	2.87314	32.8	-	JCED01	56	3038	2888	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325368	GCA_000555225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/225/GCA_000555225.1_Stap_aure_M0368_V1	-	M0368
Staphylococcus aureus M0369	1388245	PRJNA216415	216415	Terrabacteria group	Firmicutes	2.87202	32.8	-	JCEE01	46	3035	2861	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325369	GCA_000555245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/245/GCA_000555245.1_Stap_aure_M0369_V1	-	M0369
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72235	52.1	-	CILW01	47	4898	4547	3/21/15	2/27/17	Contig	SC	SAMEA2056357	GCA_001154425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/425/GCA_001154425.1_9953_5_15	-	A282
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.88147	37.9	-	FFFN01	8	2905	2809	2/9/16	3/1/17	Scaffold	SC	SAMEA2383360	GCA_900036265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/265/GCA_900036265.1_12754_5_55	-	2842STDY5753938
Mycobacterium tuberculosis BTB07-206	1423463	PRJNA229244	229244	Terrabacteria group	Actinobacteria	4.40221	65.5	-	JKGF01	3	4283	4109	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414879	GCA_000677835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/835/GCA_000677835.1_Myco_tube_BTB07-206_V1	-	BTB07-206
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.2843	50.5	-	JSSQ01	118	5523	5029	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801815	GCA_000782755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/755/GCA_000782755.1_ASM78275v1	25373147	blood-08-0379
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11027	39.7	-	CLCO01	60	2269	2026	3/21/15	3/11/17	Contig	SC	SAMEA1026025	GCA_001164285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/285/GCA_001164285.1_6871_2_7	-	SMRU1831
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.32879	66.5	-	FRFQ01	69	6021	5870	12/9/16	3/20/17	Contig	DTU	SAMEA2357365	GCA_900143795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/795/GCA_900143795.1_18	-	-
Acinetobacter baumannii	470	PRJNA325352	325352	Proteobacteria	Gammaproteobacteria	4.01824	38.9	-	LZYQ01	89	3930	3787	12/16/16	3/21/17	Contig	University of Aberdeen	SAMN05229953	GCA_001907145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/145/GCA_001907145.1_ASM190714v1	-	CRO1
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.40798	57.3	-	NFXJ01	70	5388	5159	6/9/17	6/12/17	Contig	JCVI	SAMN05960926	GCA_002187305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/305/GCA_002187305.1_ASM218730v1	-	G3435
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.34381	57.5	-	NFXM01	76	5380	5126	6/9/17	6/12/17	Contig	JCVI	SAMN05960923	GCA_002187315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/315/GCA_002187315.1_ASM218731v1	-	G2666
Acinetobacter baumannii	470	PRJNA325354	325354	Proteobacteria	Gammaproteobacteria	3.96444	38.8	-	LZYS01	89	3833	3709	12/16/16	3/21/17	Contig	University of Aberdeen	SAMN05229955	GCA_001907155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/155/GCA_001907155.1_ASM190715v1	-	CRO3
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.74019	66.2	-	FRFL01	130	6505	6302	12/9/16	3/20/17	Contig	DTU	SAMEA2357265	GCA_900143805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/805/GCA_900143805.1_10	-	-
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.19111	39.5	-	CLYN01	88	2425	2176	3/21/15	3/10/17	Contig	SC	SAMEA1029064	GCA_001164405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/405/GCA_001164405.1_6983_7_54	-	SMRU2358
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.12828	50.4	-	JSSR01	106	5272	4834	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801814	GCA_000782775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/775/GCA_000782775.1_ASM78277v1	25373147	blood-08-0215
Mycobacterium tuberculosis BTB07-243	1423465	PRJNA229246	229246	Terrabacteria group	Actinobacteria	4.40251	65.6	-	JKGD01	74	4329	4118	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414881	GCA_000677855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/855/GCA_000677855.1_Myco_tube_BTB07-243_V1	-	BTB07-243
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.00667	37.8	-	FFFF01	19	3080	2989	2/9/16	3/1/17	Scaffold	SC	SAMEA2383335	GCA_900036625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/625/GCA_900036625.1_12754_5_30	-	2842STDY5753913
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72439	52	-	CIVL01	42	4888	4524	3/21/15	2/27/17	Contig	SC	SAMEA2066530	GCA_001155545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/545/GCA_001155545.1_10209_5_44	-	UI2220
Staphylococcus aureus M0372	1388247	PRJNA216417	216417	Terrabacteria group	Firmicutes	2.90505	32.9	-	JCEF01	64	3052	2893	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325371	GCA_000555265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/265/GCA_000555265.1_Stap_aure_M0372_V1	-	M0372
Staphylococcus aureus M0373	1388248	PRJNA216418	216418	Terrabacteria group	Firmicutes	2.88771	32.9	-	JCEG01	63	3053	2890	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325372	GCA_000555285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/285/GCA_000555285.1_Stap_aure_M0373_V1	-	M0373
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.94264	51.8	-	CIUS01	81	5132	4748	3/21/15	2/27/17	Contig	SC	SAMEA2066520	GCA_001155725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/725/GCA_001155725.1_10209_5_14	-	2007-015823
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.92448	37.9	-	FFHF01	11	2984	2894	2/9/16	3/1/17	Scaffold	SC	SAMEA2383353	GCA_900036635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/635/GCA_900036635.1_12754_5_48	-	2842STDY5753931
Mycobacterium tuberculosis BTB07-246	1423466	PRJNA229247	229247	Terrabacteria group	Actinobacteria	4.41437	65.6	-	JKGC01	4	4300	4142	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414882	GCA_000677875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/875/GCA_000677875.1_Myco_tube_BTB07-246_V1	-	BTB07-246
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.83244	50.9	-	JSSS01	188	5184	4659	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801813	GCA_000782795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/795/GCA_000782795.1_ASM78279v1	25373147	blood-08-0094
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.05723	39.5	-	CMSK01	124	2269	2038	3/23/15	3/10/17	Contig	SC	SAMEA2061958	GCA_001164445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/445/GCA_001164445.1_9803_8_64	-	15B
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.73899	66.1	-	FRGF01	190	6548	6300	12/9/16	3/21/17	Contig	DTU	SAMEA2357557	GCA_900143815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/815/GCA_900143815.1_36	-	-
Acinetobacter baumannii	470	PRJNA342947	342947	Proteobacteria	Gammaproteobacteria	4.01788	39	-	MJBD01	132	3890	3732	12/20/16	3/21/17	Contig	LAU	SAMN05771141	GCA_001910585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/585/GCA_001910585.1_ASM191058v1	-	AC_6031
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.41118	57.3	-	NFXL01	85	5394	5160	6/9/17	6/12/17	Contig	JCVI	SAMN05960912	GCA_002187335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/335/GCA_002187335.1_ASM218733v1	-	G292
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.5146	57.2	-	NFXN01	87	5587	5320	6/9/17	6/12/17	Contig	JCVI	SAMN05960922	GCA_002187375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/375/GCA_002187375.1_ASM218737v1	-	G2629
Acinetobacter baumannii	470	PRJNA342940	342940	Proteobacteria	Gammaproteobacteria	3.91901	39	-	MJAZ01	76	3772	3620	12/20/16	3/21/17	Contig	LAU	SAMN05771113	GCA_001910595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/595/GCA_001910595.1_ASM191059v1	-	AC_4820
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.42233	66.4	-	FRFJ01	157	6135	5936	12/9/16	3/21/17	Contig	DTU	SAMEA2357665	GCA_900143825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/825/GCA_900143825.1_66	-	-
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.02892	39.6	-	CLXS01	55	2218	1975	3/21/15	3/10/17	Contig	SC	SAMEA1029025	GCA_001164465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/465/GCA_001164465.1_6983_6_36	-	SMRU2340
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.27179	50.7	-	JSST01	128	5603	5212	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801812	GCA_000782815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/782/815/GCA_000782815.1_ASM78281v1	25373147	blood-08-0081
Mycobacterium tuberculosis BTB07-254	1423467	PRJNA229248	229248	Terrabacteria group	Actinobacteria	4.40809	65.6	-	JKGB01	68	4316	4134	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414883	GCA_000677895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/895/GCA_000677895.1_Myco_tube_BTB07-254_V1	-	BTB07-254
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.97102	37.9	-	FFFQ01	7	3002	2916	2/9/16	3/1/17	Scaffold	SC	SAMEA2383362	GCA_900036735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/735/GCA_900036735.1_12754_5_57	-	2842STDY5753940
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74416	52.1	-	CIVB01	46	4926	4574	3/21/15	2/27/17	Contig	SC	SAMEA2064360	GCA_001156405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/405/GCA_001156405.1_10209_5_22	-	LNT1108
Staphylococcus aureus M0376	1388249	PRJNA216419	216419	Terrabacteria group	Firmicutes	2.89305	32.9	-	JCEH01	52	3040	2854	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325373	GCA_000555305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/305/GCA_000555305.1_Stap_aure_M0376_V1	-	M0376
Staphylococcus aureus M0377	1388250	PRJNA216420	216420	Terrabacteria group	Firmicutes	2.88341	32.9	-	JCEI01	55	3037	2854	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325374	GCA_000555325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/325/GCA_000555325.1_Stap_aure_M0377_V1	-	M0377
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93268	51.8	-	CJWE01	62	5117	4744	3/21/15	2/27/17	Contig	SC	SAMEA2055777	GCA_001157105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/105/GCA_001157105.1_9870_8_78	-	2012-009077
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.96302	37.9	-	FFFH01	8	3007	2921	2/9/16	3/1/17	Scaffold	SC	SAMEA2383345	GCA_900037325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/325/GCA_900037325.1_12754_5_40	-	2842STDY5753923
Mycobacterium tuberculosis BTB07-261	1423468	PRJNA229249	229249	Terrabacteria group	Actinobacteria	4.40722	65.6	-	JKGA01	8	4271	4107	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414884	GCA_000677915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/915/GCA_000677915.1_Myco_tube_BTB07-261_V1	-	BTB07-261
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.59412	50.4	-	JSHA01	201	4757	4382	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802157	GCA_000785235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/235/GCA_000785235.1_ASM78523v1	25373147	upec-64
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.09073	39.6	-	CLTF01	78	2318	2097	3/21/15	3/10/17	Contig	SC	SAMEA1028855	GCA_001164625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/625/GCA_001164625.1_6972_4_9	-	SMRU2601
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.61351	66.4	-	FRFW01	113	6308	6120	12/9/16	3/20/17	Contig	DTU	SAMEA2357412	GCA_900143835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/835/GCA_900143835.1_22	-	-
Acinetobacter baumannii	470	PRJNA342941	342941	Proteobacteria	Gammaproteobacteria	4.02376	38.9	-	MJBA01	93	3920	3762	12/20/16	3/21/17	Contig	LAU	SAMN05771115	GCA_001910605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/605/GCA_001910605.1_ASM191060v1	-	AC_2355
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.49705	57.2	-	NFXO01	82	5544	5286	6/9/17	6/12/17	Contig	JCVI	SAMN05960924	GCA_002187385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/385/GCA_002187385.1_ASM218738v1	-	G2280
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.78966	56.9	-	NFXP01	61	5838	5593	6/9/17	6/12/17	Contig	JCVI	SAMN05960921	GCA_002187395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/395/GCA_002187395.1_ASM218739v1	-	G2275
Acinetobacter baumannii	470	PRJNA342942	342942	Proteobacteria	Gammaproteobacteria	3.98904	39	-	MJBB01	107	3875	3717	12/20/16	3/21/17	Contig	LAU	SAMN05771131	GCA_001910615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/615/GCA_001910615.1_ASM191061v1	-	AC_5696
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.4261	66.4	-	FRFR01	102	6096	5929	12/9/16	3/21/17	Contig	DTU	SAMEA2357660	GCA_900143845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/845/GCA_900143845.1_62	-	-
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.21371	39.4	-	CMPM01	80	2443	2199	3/22/15	3/11/17	Contig	SC	SAMEA2061724	GCA_001164685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/685/GCA_001164685.1_9803_7_59	-	6B
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.23467	50.5	-	JSGY01	168	5418	5040	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802159	GCA_000785255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/255/GCA_000785255.1_ASM78525v1	25373147	upec-66
Mycobacterium tuberculosis BTB07-275	1423469	PRJNA229250	229250	Terrabacteria group	Actinobacteria	4.39957	65.6	-	JKFZ01	52	4298	4107	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414885	GCA_000677935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/935/GCA_000677935.1_Myco_tube_BTB07-275_V1	-	BTB07-275
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.0268	37.7	-	FFGB01	13	3081	2993	2/9/16	3/1/17	Scaffold	SC	SAMEA2383397	GCA_900037335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/335/GCA_900037335.1_12754_5_92	-	2842STDY5753976
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.75259	52.1	-	CIUT01	50	4944	4586	3/21/15	2/27/17	Contig	SC	SAMEA2064357	GCA_001157185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/185/GCA_001157185.1_10209_5_13	-	2001-100239
Staphylococcus aureus M0378	1388251	PRJNA216421	216421	Terrabacteria group	Firmicutes	2.85968	32.8	-	JCEJ01	36	3011	2854	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325375	GCA_000555345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/345/GCA_000555345.1_Stap_aure_M0378_V1	-	M0378
Staphylococcus aureus M0380	1388252	PRJNA216422	216422	Terrabacteria group	Firmicutes	2.88707	32.9	-	JCEK01	44	3014	2854	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325376	GCA_000555365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/365/GCA_000555365.1_Stap_aure_M0380_V1	-	M0380
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.76426	52	-	CJLA01	56	4946	4591	3/21/15	2/27/17	Contig	SC	SAMEA1930153	GCA_001157685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/685/GCA_001157685.1_10593_2_54	-	E99-5920
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.04302	37.8	-	FFGC01	19	3158	3066	2/9/16	3/1/17	Scaffold	SC	SAMEA2383403	GCA_900037565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/565/GCA_900037565.1_12673_8_25	-	2842STDY5753982
Mycobacterium tuberculosis BTB07-283	1423470	PRJNA229251	229251	Terrabacteria group	Actinobacteria	4.39955	65.6	-	JKFY01	5	4271	4098	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414886	GCA_000677955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/955/GCA_000677955.1_Myco_tube_BTB07-283_V1	-	BTB07-283
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.99326	50.9	-	JSLI01	96	5160	4852	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802024	GCA_000785325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/325/GCA_000785325.1_ASM78532v1	25373147	upec-203
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.09082	39.5	-	CLIN01	53	2296	2071	3/21/15	3/11/17	Contig	SC	SAMEA1028644	GCA_001164785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/785/GCA_001164785.1_6925_7_10	-	SMRU2506
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.31613	66.5	-	FRGB01	174	6084	5851	12/9/16	3/20/17	Contig	DTU	SAMEA2357388	GCA_900143855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/855/GCA_900143855.1_20	-	-
Acinetobacter baumannii	470	PRJNA342943	342943	Proteobacteria	Gammaproteobacteria	3.98746	39	-	MJBC01	84	3881	3719	12/20/16	3/22/17	Contig	LAU	SAMN05771138	GCA_001910665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/665/GCA_001910665.1_ASM191066v1	-	AC_6066
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.42257	57.4	-	NFXS01	64	5459	5209	6/9/17	6/12/17	Contig	JCVI	SAMN05960920	GCA_002187405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/405/GCA_002187405.1_ASM218740v1	-	G1598
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.6481	57.2	-	NFXT01	78	5722	5480	6/9/17	6/12/17	Contig	JCVI	SAMN05960919	GCA_002187455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/455/GCA_002187455.1_ASM218745v1	-	G1512
Acinetobacter baumannii	470	PRJNA342935	342935	Proteobacteria	Gammaproteobacteria	3.93405	39	-	MJAY01	108	3787	3634	12/20/16	3/21/17	Contig	LAU	SAMN05771108	GCA_001910675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/675/GCA_001910675.1_ASM191067v1	-	AC_4160
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.74153	66.1	-	FRFI01	142	6523	6313	12/9/16	3/21/17	Contig	DTU	SAMEA2357547	GCA_900143865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/865/GCA_900143865.1_35	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04142	39.6	-	CNRN02	128	2227	2024	3/23/15	3/11/17	Contig	SC	SAMEA1032457	GCA_001164825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/825/GCA_001164825.2_6999_1_4	-	R34-3187
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.96249	50.3	-	JSPB01	197	5260	4788	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801909	GCA_000785355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/355/GCA_000785355.1_ASM78535v1	25373147	upec-10
Mycobacterium tuberculosis BTB07-299	1423471	PRJNA229252	229252	Terrabacteria group	Actinobacteria	4.41124	65.5	-	JKFX01	7	4275	4103	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414887	GCA_000677975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/975/GCA_000677975.1_Myco_tube_BTB07-299_V1	-	BTB07-299
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.01097	37.8	-	FFGX01	9	3096	2997	2/9/16	3/1/17	Scaffold	SC	SAMEA2383322	GCA_900039305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/305/GCA_900039305.1_12754_5_17	-	2842STDY5753900
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72472	52	-	CIVQ01	45	4890	4528	3/21/15	2/27/17	Contig	SC	SAMEA2066528	GCA_001157765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/765/GCA_001157765.1_10209_5_38	-	UI2063
Staphylococcus aureus M0382	1388253	PRJNA216423	216423	Terrabacteria group	Firmicutes	2.88098	32.8	-	JCEL01	60	3047	2875	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325377	GCA_000555385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/385/GCA_000555385.1_Stap_aure_M0382_V1	-	M0382
Staphylococcus aureus M0383	1388254	PRJNA216424	216424	Terrabacteria group	Firmicutes	2.86788	32.8	-	JCEM01	47	3028	2857	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325378	GCA_000555405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/405/GCA_000555405.1_Stap_aure_M0383_V1	-	M0383
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93214	51.8	-	CJNO01	60	5149	4748	3/21/15	2/27/17	Contig	SC	SAMEA2155801	GCA_001157925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/925/GCA_001157925.1_10608_2_50	-	2012-012029
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.00134	37.8	-	FFGQ01	12	3063	2976	2/9/16	3/1/17	Scaffold	SC	SAMEA2383306	GCA_900041405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/405/GCA_900041405.1_12754_5_1	-	2842STDY5753884
Mycobacterium tuberculosis BTB07-300	1423472	PRJNA229253	229253	Terrabacteria group	Actinobacteria	4.40457	65.6	-	JKFW01	4	4273	4107	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414888	GCA_000677995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/677/995/GCA_000677995.1_Myco_tube_BTB07-300_V1	-	BTB07-300
Escherichia coli	562	PRJNA261775	261775	Proteobacteria	Gammaproteobacteria	5.14859	50.5	-	JRPZ01	145	5434	5028	11/21/14	2/25/17	Scaffold	University of Minnesota	SAMN03075670	GCA_000785765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/765/GCA_000785765.1_ASM78576v1	-	UMNturkey4
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09291	39.5	-	CMNL01	53	2327	2093	3/22/15	3/10/17	Contig	SC	SAMEA1029191	GCA_001164865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/865/GCA_001164865.1_7092_6_3	-	SMRU3099
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.41864	66.4	-	FRFK01	151	6128	5927	12/9/16	3/21/17	Contig	DTU	SAMEA2357664	GCA_900143875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/875/GCA_900143875.1_65	-	-
Acinetobacter baumannii	470	PRJNA342948	342948	Proteobacteria	Gammaproteobacteria	3.99512	39	-	MJBE01	103	3897	3737	12/20/16	3/21/17	Contig	LAU	SAMN05771142	GCA_001910685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/685/GCA_001910685.1_ASM191068v1	-	AC_6321
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.4464	57.1	-	NFXW01	62	5482	5230	6/9/17	6/12/17	Contig	JCVI	SAMN05960916	GCA_002187475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/475/GCA_002187475.1_ASM218747v1	-	G1015
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.58173	57.1	-	NFYB01	85	5649	5399	6/9/17	6/12/17	Contig	JCVI	SAMN05960905	GCA_002187535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/535/GCA_002187535.1_ASM218753v1	-	CAB1354
Acinetobacter baumannii	470	PRJNA355850	355850	Proteobacteria	Gammaproteobacteria	4.04464	39	-	MSCX01	85	3900	3739	12/28/16	3/22/17	Contig	UNAM	SAMN06111394	GCA_001922635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/635/GCA_001922635.1_ASM192263v1	-	11502
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.61345	66.4	-	FRFM01	136	6317	6117	12/9/16	3/20/17	Contig	DTU	SAMEA2357401	GCA_900143885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/885/GCA_900143885.1_21	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.03937	39.6	-	CNOM02	120	2240	2035	3/23/15	3/11/17	Contig	SC	SAMEA1032566	GCA_001164885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/885/GCA_001164885.2_6925_2_85	-	R34-3067
Escherichia coli	562	PRJNA261775	261775	Proteobacteria	Gammaproteobacteria	4.97676	50.7636	plasmid pUMNturkey6_1:NZ_JRQB01000010.1/JRQB01000010.1; plasmid pUMNturkey6_10:NZ_JRQB01000019.1/JRQB01000019.1; plasmid pUMNturkey6_12:NZ_JRQB01000033.1/JRQB01000033.1; plasmid pUMNturkey6_5:NZ_JRQB01000023.1/JRQB01000023.1	JRQB01	100	5213	4872	11/21/14	2/23/17	Scaffold	University of Minnesota	SAMN03075672	GCA_000785775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/775/GCA_000785775.1_ASM78577v1	-	UMNturkey6
Mycobacterium tuberculosis BTB07-323	1423474	PRJNA229255	229255	Terrabacteria group	Actinobacteria	4.40423	65.5	-	JKFU01	6	4291	4105	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414890	GCA_000678015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/015/GCA_000678015.1_Myco_tube_BTB07-323_V1	-	BTB07-323
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.9007	37.9	-	FFFA01	9	2950	2854	2/9/16	3/1/17	Scaffold	SC	SAMEA2383319	GCA_900041415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/415/GCA_900041415.1_12754_5_14	-	2842STDY5753897
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72281	52.1	-	CJJM01	50	4890	4526	3/21/15	2/27/17	Contig	SC	SAMEA1930195	GCA_001159425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/425/GCA_001159425.1_10592_2_49	-	E02-2364
Staphylococcus aureus M0384	1388255	PRJNA216425	216425	Terrabacteria group	Firmicutes	2.90371	32.8	-	JCEN01	62	3087	2914	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325379	GCA_000555425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/425/GCA_000555425.1_Stap_aure_M0384_V1	-	M0384
Staphylococcus aureus M0385	1388256	PRJNA216426	216426	Terrabacteria group	Firmicutes	2.95627	32.8	-	JCEO01	77	3153	2960	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325380	GCA_000555445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/445/GCA_000555445.1_Stap_aure_M0385_V1	-	M0385
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69791	52.1	-	CJIQ01	41	4864	4509	3/21/15	2/27/17	Contig	SC	SAMEA1929461	GCA_001159465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/465/GCA_001159465.1_10592_2_15	-	20753
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.10638	37.8	-	FFEP01	17	3172	3075	2/9/16	3/1/17	Scaffold	SC	SAMEA2383292	GCA_900043345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/345/GCA_900043345.1_12754_4_82	-	2842STDY5753870
Mycobacterium tuberculosis BTB07-324	1423475	PRJNA229256	229256	Terrabacteria group	Actinobacteria	4.41093	65.5	-	JKFT01	3	4284	4111	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414891	GCA_000678035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/035/GCA_000678035.1_Myco_tube_BTB07-324_V1	-	BTB07-324
Escherichia coli	562	PRJNA261775	261775	Proteobacteria	Gammaproteobacteria	4.92649	50.79	plasmid pUMNturkey5_5:NZ_JRQA01000059.1/JRQA01000059.1; plasmid pUMNturkey5_IncX:NZ_JRQA01000080.1/JRQA01000080.1	JRQA01	80	5114	4796	11/21/14	2/23/17	Scaffold	University of Minnesota	SAMN03075671	GCA_000785795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/795/GCA_000785795.1_ASM78579v1	-	UMNturkey5
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06476	39.6	-	CNYQ02	120	2256	2036	3/23/15	3/11/17	Contig	SC	SAMEA1463190	GCA_001164925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/925/GCA_001164925.2_7553_4_41	-	NP7053
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.42755	66.4	-	FRFP01	96	6098	5933	12/9/16	3/21/17	Contig	DTU	SAMEA2357657	GCA_900143895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/895/GCA_900143895.1_60	-	-
Acinetobacter baumannii	470	PRJNA355850	355850	Proteobacteria	Gammaproteobacteria	4.04185	39	-	MSDA01	82	3944	3759	12/28/16	3/21/17	Contig	UNAM	SAMN06111393	GCA_001922685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/685/GCA_001922685.1_ASM192268v1	-	4113
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.45076	57.2	-	NFYD01	85	5526	5250	6/9/17	6/12/17	Contig	JCVI	SAMN05960903	GCA_002187545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/545/GCA_002187545.1_ASM218754v1	-	BH3723
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.65219	57.1	-	NFYA01	111	5793	5514	6/9/17	6/12/17	Contig	JCVI	SAMN05960906	GCA_002187575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/575/GCA_002187575.1_ASM218757v1	-	CAB1442
Acinetobacter baumannii	470	PRJNA355850	355850	Proteobacteria	Gammaproteobacteria	4.02917	39	-	MSDB01	84	3888	3712	12/28/16	3/21/17	Contig	UNAM	SAMN06111389	GCA_001922695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/695/GCA_001922695.1_ASM192269v1	-	11547
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.54822	66.3	-	FRFY01	143	6322	6084	12/9/16	3/21/17	Contig	DTU	SAMEA2357670	GCA_900143905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/905/GCA_900143905.1_77	-	-
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.98725	39.9	-	CKCQ01	92	2165	1854	3/21/15	3/10/17	Contig	SC	SAMEA1024025	GCA_001165025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/025/GCA_001165025.1_6593_4_6	-	type strain: N
Escherichia coli	562	PRJNA261775	261775	Proteobacteria	Gammaproteobacteria	5.14226	50.501	plasmid pUMNturkey3_3:NZ_JROQ01000053.1/JROQ01000053.1	JROQ01	98	5436	5052	11/21/14	2/23/17	Scaffold	University of Minnesota	SAMN03075669	GCA_000785865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/865/GCA_000785865.1_ASM78586v1	-	UMNturkey3
Mycobacterium tuberculosis BTB07-325	1423476	PRJNA229257	229257	Terrabacteria group	Actinobacteria	4.37288	65.6	-	JKFS01	2	4257	4098	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414892	GCA_000678055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/055/GCA_000678055.1_Myco_tube_BTB07-325_V1	-	BTB07-325
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.01785	37.8	-	FFHB01	8	3065	2981	2/9/16	3/1/17	Scaffold	SC	SAMEA2383334	GCA_900043355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/355/GCA_900043355.1_12754_5_29	-	2842STDY5753912
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.90172	51.9	-	CJKL01	52	5122	4751	3/21/15	2/27/17	Contig	SC	SAMEA1930255	GCA_001159785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/785/GCA_001159785.1_10593_2_28	-	Sep-74
Staphylococcus aureus M0386	1388257	PRJNA216427	216427	Terrabacteria group	Firmicutes	2.89439	32.8	-	JCEP01	59	3085	2912	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325381	GCA_000555465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/465/GCA_000555465.1_Stap_aure_M0386_V1	-	M0386
Staphylococcus aureus M0388	1388258	PRJNA216428	216428	Terrabacteria group	Firmicutes	2.89419	32.8	-	JCEQ01	71	3078	2892	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325382	GCA_000555485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/485/GCA_000555485.1_Stap_aure_M0388_V1	-	M0388
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.91937	51.8	-	CIWA01	53	5111	4734	3/21/15	2/27/17	Contig	SC	SAMEA2064552	GCA_001160365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/365/GCA_001160365.1_10209_5_58	-	UI3275
Listeria monocytogenes	1639	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.01933	37.8	-	FFET01	10	3117	3032	2/9/16	3/1/17	Scaffold	SC	SAMEA2383302	GCA_900045395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/395/GCA_900045395.1_12754_4_92	-	2842STDY5753880
Mycobacterium tuberculosis BTB07-354	1423478	PRJNA229259	229259	Terrabacteria group	Actinobacteria	4.44196	65.5	-	JKFQ01	7	4315	4109	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414894	GCA_000678075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/075/GCA_000678075.1_Myco_tube_BTB07-354_V1	-	BTB07-354
Escherichia coli	562	PRJNA267608	267608	Proteobacteria	Gammaproteobacteria	4.85989	50.6	-	JTGK01	137	5075	4689	12/22/14	2/23/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN03196608	GCA_000806245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/245/GCA_000806245.1_ASM80624v1	-	CE549
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.10143	39.6	-	CMQW01	96	2354	2102	3/23/15	3/10/17	Contig	SC	SAMEA2062155	GCA_001165045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/045/GCA_001165045.1_9803_8_20	-	10B
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.7418	66.2	-	FRGC01	143	6525	6301	12/9/16	3/20/17	Contig	DTU	SAMEA2357287	GCA_900143915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/915/GCA_900143915.1_12	-	-
Acinetobacter baumannii	470	PRJNA355850	355850	Proteobacteria	Gammaproteobacteria	4.11505	39.1	-	MSCY01	66	4008	3781	12/28/16	3/22/17	Contig	UNAM	SAMN06111381	GCA_001922705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/705/GCA_001922705.1_ASM192270v1	-	11536
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.16289	57.5	-	NFYC01	72	5216	4971	6/9/17	6/12/17	Contig	JCVI	SAMN05960904	GCA_002187585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/585/GCA_002187585.1_ASM218758v1	-	BH3953
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.23687	57.6	-	NFYE01	61	5173	4960	6/9/17	6/12/17	Contig	JCVI	SAMN05960902	GCA_002187615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/615/GCA_002187615.1_ASM218761v1	-	BH3183
Acinetobacter baumannii	470	PRJNA355850	355850	Proteobacteria	Gammaproteobacteria	4.05369	39	-	MSDC01	66	3941	3771	12/28/16	3/22/17	Contig	UNAM	SAMN06111363	GCA_001922745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/745/GCA_001922745.1_ASM192274v1	-	11551
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.51929	66.4	-	FRFT01	90	6256	6076	12/9/16	3/20/17	Contig	DTU	SAMEA2357458	GCA_900143925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/925/GCA_900143925.1_27	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06225	39.6	-	COCW02	152	2227	2021	3/23/15	3/5/17	Contig	SC	SAMEA1463256	GCA_001165065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/065/GCA_001165065.2_7622_3_88	-	GL3036
Escherichia coli	562	PRJNA267608	267608	Proteobacteria	Gammaproteobacteria	4.94793	50.3	-	JUBB01	142	5261	4890	12/22/14	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN03196610	GCA_000806255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/255/GCA_000806255.1_ASM80625v1	-	E2265
Mycobacterium tuberculosis BTB08-001	1423479	PRJNA229260	229260	Terrabacteria group	Actinobacteria	4.41599	65.5	-	JKFP01	4	4296	4125	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414895	GCA_000678095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/095/GCA_000678095.1_Myco_tube_BTB08-001_V1	-	BTB08-001
Listeria monocytogenes ATCC 19115	176281	PRJEB20521	392408	Terrabacteria group	Firmicutes	2.96511	38	-	FZRK01	26	3024	2946	8/1/17	8/7/17	Scaffold	JLU	SAMEA104016189	GCA_900199755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/199/755/GCA_900199755.1_Listeria_portugal_2542	-	-
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73743	52.1	-	CJJT01	42	4899	4552	3/21/15	2/27/17	Contig	SC	SAMEA1929460	GCA_001160705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/705/GCA_001160705.1_10592_2_6	-	18763
Staphylococcus aureus M0390	1388260	PRJNA216430	216430	Terrabacteria group	Firmicutes	2.88288	32.9	-	JCER01	58	3030	2856	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325384	GCA_000555505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/505/GCA_000555505.1_Stap_aure_M0390_V1	-	M0390
Staphylococcus aureus M0398	1388263	PRJNA216433	216433	Terrabacteria group	Firmicutes	2.87963	32.8	-	JCES01	50	3047	2867	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325387	GCA_000555525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/525/GCA_000555525.1_Stap_aure_M0398_V1	-	M0398
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.80344	52.1	-	CJYG01	41	4979	4619	3/21/15	2/27/17	Contig	SC	SAMEA2059364	GCA_001160865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/865/GCA_001160865.1_9953_5_61	-	KM1646
Blattabacterium sp. (Cryptocercus punctulatus) str. Cpu	1075399	PRJNA71047	71047	FCB group	Bacteroidetes/Chlorobi group	0.609561	23.8419	chromosome:NC_016621.1/CP003015.1; plasmid pCpu:NC_016598.1/CP003016.1	-	2	592	541	11/29/11	4/17/17	Complete Genome	University of Valencia	SAMN02604251	GCA_000236405.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/405/GCA_000236405.1_ASM23640v1	22094859	Cpu
Mycobacterium tuberculosis BTB08-014	1423480	PRJNA229261	229261	Terrabacteria group	Actinobacteria	4.40766	65.6	-	JKFO01	7	4278	4109	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414896	GCA_000678115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/115/GCA_000678115.1_Myco_tube_BTB08-014_V1	-	BTB08-014
Escherichia coli	562	PRJNA267608	267608	Proteobacteria	Gammaproteobacteria	5.11775	50.5	-	JTHI01	150	5459	5076	12/22/14	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN03196609	GCA_000806265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/265/GCA_000806265.1_ASM80626v1	-	E1777
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.11851	39.7	-	CRJO01	46	2268	1977	3/23/15	3/15/17	Contig	SC	SAMEA1025581	GCA_001165105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/105/GCA_001165105.1_6753_2_22	-	SMRU1511
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.77519	66.1	-	FRGA01	137	6471	6254	12/9/16	3/21/17	Contig	DTU	SAMEA2357652	GCA_900143935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/935/GCA_900143935.1_55	-	-
Acinetobacter baumannii	470	PRJNA355850	355850	Proteobacteria	Gammaproteobacteria	3.98178	39	-	MSDD01	70	3824	3666	12/28/16	3/21/17	Contig	UNAM	SAMN06111391	GCA_001922755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/922/755/GCA_001922755.1_ASM192275v1	-	11606
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.5084	57.2	-	NFYI01	78	5580	5327	6/9/17	6/12/17	Contig	JCVI	SAMN05960898	GCA_002187625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/625/GCA_002187625.1_ASM218762v1	-	BH1986
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.56686	57.1	-	NFYM01	99	5648	5382	6/9/17	6/12/17	Contig	JCVI	SAMN05960953	GCA_002187655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/655/GCA_002187655.1_ASM218765v1	-	AK_905
Acinetobacter baumannii	470	PRJNA355850	355850	Proteobacteria	Gammaproteobacteria	4.0295	38.8	-	MSCZ01	91	3907	3694	12/28/16	3/21/17	Contig	UNAM	SAMN06111392	GCA_001923005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/923/005/GCA_001923005.1_ASM192300v1	-	11598
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.61473	66.4	-	FRGU01	86	6281	6115	12/9/16	3/20/17	Contig	DTU	SAMEA2357448	GCA_900143945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/945/GCA_900143945.1_26	-	-
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.17696	39.6	-	CKUH01	56	2386	2164	3/21/15	3/4/17	Contig	SC	SAMEA1025715	GCA_001165165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/165/GCA_001165165.1_6823_3_10	-	SMRU1906
Escherichia coli	562	PRJNA267608	267608	Proteobacteria	Gammaproteobacteria	5.06863	50.5	-	JTGM01	99	5322	4957	12/22/14	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN03196607	GCA_000806275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/275/GCA_000806275.1_ASM80627v1	-	CE516
Mycobacterium tuberculosis BTB08-022	1423481	PRJNA229262	229262	Terrabacteria group	Actinobacteria	4.38418	65.6	-	JKFN01	8	4277	4100	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414897	GCA_000678135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/135/GCA_000678135.1_Myco_tube_BTB08-022_V1	-	BTB08-022
Mycoplasma mycoides subsp. capri LC str. 95010	862259	PRJEA50391	50391	Terrabacteria group	Tenericutes	1.15584	23.8086	chromosome:NC_015431.1/FQ377874.1; plasmid pMmc-95010:NC_015407.1/FQ790215.1	-	2	1014	914	4/12/11	3/30/17	Complete Genome	Genoscope	SAMEA2272808	GCA_000253075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/253/075/GCA_000253075.1_ASM25307v1	21324191	95010
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71868	52	-	CJAK01	42	4867	4512	3/21/15	2/27/17	Contig	SC	SAMEA2158751	GCA_001161005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/005/GCA_001161005.1_10492_1_6	-	MDUST127
Staphylococcus aureus M0399	1388264	PRJNA216434	216434	Terrabacteria group	Firmicutes	2.87256	32.8	-	JCET01	51	3036	2859	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325388	GCA_000555545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/545/GCA_000555545.1_Stap_aure_M0399_V1	-	M0399
Staphylococcus aureus M0400	1388265	PRJNA216435	216435	Terrabacteria group	Firmicutes	2.8536	32.8	-	JCEU01	30	3004	2856	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325389	GCA_000555565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/565/GCA_000555565.1_Stap_aure_M0400_V1	-	M0400
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.92934	51.8	-	CJMF01	62	5128	4750	3/21/15	2/27/17	Contig	SC	SAMEA2159155	GCA_001161125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/125/GCA_001161125.1_10607_1_92	-	2012-010204
Listeria monocytogenes serotype 1/2a str. 01-1280	1385996	PRJNA215181	215181	Terrabacteria group	Firmicutes	2.97505	37.9	chromosome:CP006940.1	-	1	3023	2963	2/10/14	9/14/16	Chromosome	Public Health Agency of Canada	SAMN05771117	GCA_000567965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/965/GCA_000567965.1_ASM56796v1	-	01-1280
Mycobacterium tuberculosis BTB08-043	1423482	PRJNA229263	229263	Terrabacteria group	Actinobacteria	4.42078	65.5	-	JKFM01	4	4292	4087	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414898	GCA_000678155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/155/GCA_000678155.1_Myco_tube_BTB08-043_V1	-	BTB08-043
Escherichia coli	562	PRJNA268254	268254	Proteobacteria	Gammaproteobacteria	5.52341	50.2	-	JTGI01	139	5830	5454	1/5/15	2/25/17	Scaffold	The University of Queensland	SAMN03217331	GCA_000814525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/814/525/GCA_000814525.1_ASM81452v1	25858833	CR694
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.06806	39.5	-	CLWD01	78	2258	2048	3/21/15	3/4/17	Contig	SC	SAMEA1025888	GCA_001165225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/225/GCA_001165225.1_6983_4_86	-	SMRU2294
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.55105	66.4	-	FRGD01	209	6299	6038	12/9/16	3/21/17	Contig	DTU	SAMEA2357568	GCA_900143955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/955/GCA_900143955.1_37	-	-
Acinetobacter baumannii	470	PRJNA343165	343165	Proteobacteria	Gammaproteobacteria	4.19817	39.6	-	MJBK01	427	4004	3795	1/9/17	3/22/17	Contig	Christian Medical College	SAMN05781218	GCA_001939595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/595/GCA_001939595.1_ASM193959v1	-	VB36560
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.1625	57.6	-	NFYJ01	92	5191	4908	6/9/17	6/12/17	Contig	JCVI	SAMN05960897	GCA_002187665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/665/GCA_002187665.1_ASM218766v1	-	BH1877
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.55744	57.2	-	NFYS01	105	5637	5367	6/9/17	6/12/17	Contig	JCVI	SAMN05960949	GCA_002187685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/685/GCA_002187685.1_ASM218768v1	-	AK_800
Acinetobacter baumannii	470	PRJNA343166	343166	Proteobacteria	Gammaproteobacteria	3.92833	38.9	-	MJBL01	96	3806	3607	1/9/17	3/21/17	Contig	Christian Medical College	SAMN05781219	GCA_001939605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/605/GCA_001939605.1_ASM193960v1	-	VB39358
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.43343	66.4	-	FRFS01	75	6084	5937	12/9/16	3/21/17	Contig	DTU	SAMEA2357659	GCA_900143965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/965/GCA_900143965.1_61	-	-
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12989	39.5	-	CLFY01	63	2357	2113	3/21/15	3/4/17	Contig	SC	SAMEA1025750	GCA_001165265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/265/GCA_001165265.1_6925_3_13	-	SMRU2125
Escherichia coli N37139PS	1416674	PRJNA221632	221632	Proteobacteria	Gammaproteobacteria	5.25991	50.3959	plasmid pN37139PS:NZ_CM007998.1/CM007998.1; plasmid pTC_N37410PS:NZ_CP007652.1/CP007652.1	AZCE01	61	5490	5087	1/24/17	8/21/17	Scaffold	FDA	SAMN02390173	GCA_000816865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/865/GCA_000816865.2_ASM81686v2	-	N37139PS
Mycobacterium tuberculosis BTB08-072	1423483	PRJNA229264	229264	Terrabacteria group	Actinobacteria	4.40987	65.6	-	JKFL01	8	4282	4110	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414899	GCA_000678175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/175/GCA_000678175.1_Myco_tube_BTB08-072_V1	-	BTB08-072
Listeria monocytogenes FSL F2-208	702458	PRJNA42847	42847	Terrabacteria group	Firmicutes	3.22318	37.9	chromosome:CM001046.1	ADXE01	1	6644	6636	12/6/10	11/19/13	Chromosome	Life Technologies Corporation	SAMN01125831	GCA_000183845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/845/GCA_000183845.1_ASM18384v1	21126366	FSL F2-208
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7242	52	-	CIVH01	46	4883	4523	3/21/15	2/27/17	Contig	SC	SAMEA2066529	GCA_001162085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/085/GCA_001162085.1_10209_5_41	-	UI2144
Staphylococcus aureus M0402	1388266	PRJNA216436	216436	Terrabacteria group	Firmicutes	2.87234	32.9	-	JCEV01	46	3034	2856	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325390	GCA_000555585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/585/GCA_000555585.1_Stap_aure_M0402_V1	-	M0402
Staphylococcus aureus M0403	1388267	PRJNA216437	216437	Terrabacteria group	Firmicutes	2.8964	32.9	-	JCEW01	72	3066	2882	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325391	GCA_000555605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/605/GCA_000555605.1_Stap_aure_M0403_V1	-	M0403
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	5.02522	52	-	CQGM01	49	5224	4952	3/23/15	2/27/17	Contig	SC	SAMEA1568513	GCA_001162405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/405/GCA_001162405.1_8490_2_53	-	CH10
Listeria monocytogenes FSL F2-515	393116	PRJNA17297	17297	Terrabacteria group	Firmicutes	1.816	37.4	-	AARI02	1728	-	-	10/13/06	11/19/13	Contig	Broad Institute	SAMN00777160	GCA_000168375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/375/GCA_000168375.1_ASM16837v1	-	FSL F2-515
Mycobacterium tuberculosis BTB08-093	1423484	PRJNA229265	229265	Terrabacteria group	Actinobacteria	4.41273	65.5	-	JKFK01	3	4290	4105	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414900	GCA_000678195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/195/GCA_000678195.1_Myco_tube_BTB08-093_V1	-	BTB08-093
Escherichia coli 53C	1412830	PRJNA260957	260957	Proteobacteria	Gammaproteobacteria	5.56453	50.7	-	JXMX01	11	5912	5407	2/3/15	2/23/17	Scaffold	University Medical Center Utrecht	SAMN03067747	GCA_000831715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/715/GCA_000831715.1_ASM83171v1	-	53C
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06643	39.6	-	CNTW02	159	2234	2018	3/22/15	3/11/17	Contig	SC	SAMEA1032539	GCA_001165345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/345/GCA_001165345.2_6999_5_14	-	181272
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.52281	66.4	-	FUEJ01	181	6259	6022	2/1/17	3/22/17	Contig	DTU	SAMEA2357491	GCA_900143975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/975/GCA_900143975.1_30	-	-
Acinetobacter baumannii	470	PRJNA343169	343169	Proteobacteria	Gammaproteobacteria	4.06907	39	-	MJBM01	105	3963	3761	1/9/17	3/22/17	Contig	Christian Medical College	SAMN05781221	GCA_001939665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/665/GCA_001939665.1_ASM193966v1	-	VB3552
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.56798	57.1	-	NFYN01	95	5654	5390	6/9/17	6/12/17	Contig	JCVI	SAMN05960950	GCA_002187715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/715/GCA_002187715.1_ASM218771v1	-	AK_896
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.46603	57.1	-	NFYO01	67	5468	5192	6/9/17	6/12/17	Contig	JCVI	SAMN05960957	GCA_002187735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/735/GCA_002187735.1_ASM218773v1	-	AK_1025
Acinetobacter baumannii	470	PRJNA308422	308422	Proteobacteria	Gammaproteobacteria	3.88345	39.6	-	MSLX01	850	3856	3645	1/12/17	4/6/17	Contig	CHU A Coruna	SAMN06106559	GCA_001949955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/955/GCA_001949955.1_ASM194995v1	28328989	Ab103_GEIH-2010
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.75027	66.1	-	FRGE01	232	6520	6225	12/9/16	3/21/17	Contig	DTU	SAMEA2357655	GCA_900143985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/985/GCA_900143985.1_58	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.00803	39.7	-	CRVD01	58	2210	1990	3/22/15	3/5/17	Contig	SC	SAMEA1025232	GCA_001165385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/385/GCA_001165385.1_6805_6_5	-	SMRU1709
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.40232	50.4	-	-	49	5854	5365	-	-	Scaffold	NTNU	SAMEA2593906	GCA_000935905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/905/GCA_000935905.1_FHI21	-	FHI21
Mycobacterium tuberculosis BTB08-148	1423485	PRJNA229266	229266	Terrabacteria group	Actinobacteria	4.41355	65.6	-	JKFJ01	23	4280	4093	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414901	GCA_000678215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/215/GCA_000678215.1_Myco_tube_BTB08-148_V1	-	BTB08-148
Listeria monocytogenes FSL J1-208	393119	PRJNA17303	17303	Terrabacteria group	Firmicutes	1.96374	37.7	-	AARL02	1660	-	-	10/16/06	11/19/13	Contig	Broad Institute	SAMN01121066	GCA_000168435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/435/GCA_000168435.1_ASM16843v1	-	FSL J1-208
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74886	52.1	-	CJTH01	46	4911	4539	3/21/15	2/27/17	Contig	SC	SAMEA1903876	GCA_001162605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/605/GCA_001162605.1_9475_6_50	-	1017137
Staphylococcus aureus M0405	1388268	PRJNA216438	216438	Terrabacteria group	Firmicutes	2.93447	32.9	-	JCEX01	58	3087	2917	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325392	GCA_000555625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/625/GCA_000555625.1_Stap_aure_M0405_V1	-	M0405
Staphylococcus aureus M0409	1388270	PRJNA216440	216440	Terrabacteria group	Firmicutes	2.93422	32.9	-	JCEZ01	52	3093	2929	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325394	GCA_000555665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/665/GCA_000555665.1_Stap_aure_M0409_V1	-	M0409
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.91077	51.9	-	CJKG01	52	5140	4750	3/21/15	2/27/17	Contig	SC	SAMEA1930210	GCA_001162945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/945/GCA_001162945.1_10593_2_19	-	06-1510
Listeria monocytogenes FSL J2-003	393120	PRJNA17305	17305	Terrabacteria group	Firmicutes	2.74164	37.8	-	AARM02	795	-	-	10/16/06	11/20/13	Contig	Broad Institute	SAMN02415201	GCA_000168455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/455/GCA_000168455.1_ASM16845v1	-	FSL J2-003
Mycobacterium tuberculosis BTB08-183	1423486	PRJNA229267	229267	Terrabacteria group	Actinobacteria	4.4213	65.5	-	JKFI01	5	4311	4103	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414902	GCA_000678235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/235/GCA_000678235.1_Myco_tube_BTB08-183_V1	-	BTB08-183
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.40464	50.3	-	-	51	5860	5370	-	-	Scaffold	NTNU	SAMEA2593969	GCA_000936085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/085/GCA_000936085.2_FHI90	-	FHI90
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.11572	39.7	-	CNSQ02	259	2294	2073	3/22/15	3/11/17	Contig	SC	SAMEA1032650	GCA_001165405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/405/GCA_001165405.2_6999_4_13	-	110093
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.61864	66.4	-	FRFX01	95	6291	6120	12/9/16	3/21/17	Contig	DTU	SAMEA2357600	GCA_900143995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/995/GCA_900143995.1_40	-	-
Acinetobacter baumannii	470	PRJNA308422	308422	Proteobacteria	Gammaproteobacteria	3.86251	39.6	-	MSLY01	888	3847	3621	1/12/17	4/6/17	Contig	CHU A Coruna	SAMN06106558	GCA_001949965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/965/GCA_001949965.1_ASM194996v1	28328989	Ab76_GEIH-2010
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.58619	57.2	-	NFVQ01	83	5650	5394	6/9/17	6/12/17	Contig	JCVI	SAMN05960873	GCA_002187745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/745/GCA_002187745.1_ASM218774v1	-	PO380
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.36642	57.3	-	NFVV01	73	5394	5149	6/9/17	6/12/17	Contig	JCVI	SAMN05960894	GCA_002187775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/775/GCA_002187775.1_ASM218777v1	-	PO2659
Acinetobacter baumannii	470	PRJNA308422	308422	Proteobacteria	Gammaproteobacteria	3.78156	39.4	-	MSMH01	542	3664	3492	1/12/17	4/6/17	Contig	CHU A Coruna	SAMN06106570	GCA_001950085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/085/GCA_001950085.1_ASM195008v1	28328989	Ab192_GEIH-2000
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.54075	66.3	-	FRFO01	116	6295	6084	12/9/16	3/21/17	Contig	DTU	SAMEA2357669	GCA_900144005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/005/GCA_900144005.1_76	-	-
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11065	39.7	-	CKNB01	39	2339	2126	3/21/15	3/4/17	Contig	SC	SAMEA1024181	GCA_001165425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/425/GCA_001165425.1_6649_8_22	-	6C
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.25989	50.6	-	-	37	5635	5215	-	-	Scaffold	NTNU	SAMEA2593955	GCA_000936125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/125/GCA_000936125.1_FHI75	-	FHI75
Mycobacterium tuberculosis BTB08-221	1423487	PRJNA229268	229268	Terrabacteria group	Actinobacteria	4.47828	65.3	-	JKFH01	8	4316	4124	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414903	GCA_000678255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/255/GCA_000678255.1_Myco_tube_BTB08-221_V1	-	BTB08-221
Listeria monocytogenes FSL J2-064	393122	PRJNA17309	17309	Terrabacteria group	Firmicutes	2.8287	37.9	-	AARO02	545	-	-	10/16/06	11/20/13	Contig	Broad Institute	SAMN02415203	GCA_000168495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/495/GCA_000168495.1_ASM16849v1	-	FSL J2-064
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.88606	51.9	-	CJKM01	54	5099	4706	3/21/15	2/27/17	Contig	SC	SAMEA1930264	GCA_001163165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/165/GCA_001163165.1_10593_2_29	-	76-1406
Staphylococcus aureus M0411	1388272	PRJNA216442	216442	Terrabacteria group	Firmicutes	2.89585	32.8	-	JCFA01	61	3083	2902	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325396	GCA_000555685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/685/GCA_000555685.1_Stap_aure_M0411_V1	-	M0411
Staphylococcus aureus M0412	1388273	PRJNA216443	216443	Terrabacteria group	Firmicutes	2.89642	32.9	-	JCFB01	57	3045	2854	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325397	GCA_000555705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/705/GCA_000555705.1_Stap_aure_M0412_V1	-	M0412
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73319	52	-	CJYO01	50	4894	4542	3/21/15	2/27/17	Contig	SC	SAMEA2059208	GCA_001163385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/385/GCA_001163385.1_9953_5_7	-	A273
Listeria monocytogenes LO28	393132	PRJNA17329	17329	Terrabacteria group	Firmicutes	2.67558	37.8	-	AARY02	1150	-	-	10/16/06	11/20/13	Contig	Broad Institute	SAMN02415206	GCA_000168675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/675/GCA_000168675.1_ASM16867v1	-	LO28
Mycobacterium tuberculosis BTB08-283	1423488	PRJNA229269	229269	Terrabacteria group	Actinobacteria	4.39874	65.6	-	JKFG01	3	4274	4107	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414904	GCA_000678275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/275/GCA_000678275.1_Myco_tube_BTB08-283_V1	-	BTB08-283
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.41747	50.4	-	-	40	5855	5372	-	-	Scaffold	NTNU	SAMEA2593894	GCA_000936245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/245/GCA_000936245.1_FHI7	-	FHI7
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12324	39.5	-	CMQK01	40	2348	2097	3/23/15	3/4/17	Contig	SC	SAMEA2062154	GCA_001165505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/505/GCA_001165505.1_9803_8_18	-	23F
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.61435	66.4	-	FRGK01	101	6295	6120	12/9/16	3/21/17	Contig	DTU	SAMEA2357589	GCA_900144015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/015/GCA_900144015.1_39	-	-
Acinetobacter baumannii	470	PRJNA308422	308422	Proteobacteria	Gammaproteobacteria	3.7443	39.7	-	MSMI01	895	3723	3490	1/12/17	4/6/17	Contig	CHU A Coruna	SAMN06106567	GCA_001950095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/095/GCA_001950095.1_ASM195009v1	28328989	Ab175_GEIH-2000
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.46497	57.1	-	NFYQ01	70	5464	5194	6/9/17	6/12/17	Contig	JCVI	SAMN05960955	GCA_002187785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/785/GCA_002187785.1_ASM218778v1	-	AK_1023
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.37114	57.4	-	NFWC01	80	5401	5138	6/9/17	6/12/17	Contig	JCVI	SAMN05960887	GCA_002187805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/805/GCA_002187805.1_ASM218780v1	-	PO1563
Acinetobacter baumannii	470	PRJNA308422	308422	Proteobacteria	Gammaproteobacteria	3.86906	39.5	-	MSMJ01	793	3853	3623	1/12/17	4/6/17	Contig	CHU A Coruna	SAMN06106569	GCA_001950155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/155/GCA_001950155.1_ASM195015v1	28328989	Ab183_GEIH-2000
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.42805	66.4	-	FRGI01	117	6112	5935	12/9/16	3/21/17	Contig	DTU	SAMEA2357656	GCA_900144025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/025/GCA_900144025.1_59	-	-
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.0341	39.7	-	CLTT01	62	2241	2032	3/21/15	3/4/17	Contig	SC	SAMEA1029134	GCA_001165545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/545/GCA_001165545.1_6972_5_15	-	SMRU2631
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.35737	50.6	-	-	36	5708	5300	-	-	Scaffold	NTNU	SAMEA2593980	GCA_000936495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/495/GCA_000936495.1_FHI102	-	FHI102
Mycobacterium tuberculosis BTB08-288	1423489	PRJNA229270	229270	Terrabacteria group	Actinobacteria	4.4043	65.6	-	JKFF01	2	4272	4105	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414905	GCA_000678295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/295/GCA_000678295.1_Myco_tube_BTB08-288_V1	-	BTB08-288
Listeria monocytogenes FSL F6-684	1273540	PRJNA184060	184060	Terrabacteria group	Firmicutes	2.84596	37.9	-	AODC01	34	2738	2682	1/31/14	5/1/14	Contig	Cornell University	SAMN02742052	GCA_000525815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/525/815/GCA_000525815.1_LmonocytogenesType	-	FSL F6-684
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB4240	222606	Proteobacteria	Gammaproteobacteria	4.80834	52.1	-	CJDJ01	46	4997	4631	3/21/15	2/27/17	Contig	SC	SAMEA2151668	GCA_001163445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/445/GCA_001163445.1_10541_1_73	-	ST805/02
Staphylococcus aureus M0413	1388274	PRJNA216444	216444	Terrabacteria group	Firmicutes	2.70401	32.8	-	JCFC01	52	2823	2654	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325398	GCA_000555725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/725/GCA_000555725.1_Stap_aure_M0413_V1	-	M0413
Staphylococcus aureus M0414	1388275	PRJNA216445	216445	Terrabacteria group	Firmicutes	2.90308	32.9	-	JCFD01	47	3065	2884	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325399	GCA_000555745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/745/GCA_000555745.1_Stap_aure_M0414_V1	-	M0414
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3164	204701	Proteobacteria	Gammaproteobacteria	4.93136	51.8	-	CJQX01	53	5119	4751	3/21/15	2/27/17	Contig	SC	SAMEA1571989	GCA_001163605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/605/GCA_001163605.1_8525_2_54	-	Ke378
Listeria monocytogenes 36-25-1	1380708	PRJDB1430	236981	Terrabacteria group	Firmicutes	2.95344	37.8	-	BASN01	122	38	37	1/30/14	9/16/15	Contig	Tokyo university of marine science and technology	SAMD00036754	GCA_000534895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/895/GCA_000534895.1_ASM53489v1	24472083	36-25-1
Mycobacterium tuberculosis BTB08-309	1423490	PRJNA229271	229271	Terrabacteria group	Actinobacteria	4.37155	65.6	-	JKFE01	2	4243	4075	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414906	GCA_000678315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/315/GCA_000678315.1_Myco_tube_BTB08-309_V1	-	BTB08-309
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.33485	50.5	-	-	34	5748	5275	-	-	Scaffold	NTNU	SAMEA2593897	GCA_000936635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/635/GCA_000936635.1_FHI11	-	FHI11
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.13058	39.7	-	CLEF01	70	2336	2137	3/21/15	3/10/17	Contig	SC	SAMEA1026150	GCA_001165645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/645/GCA_001165645.1_6899_6_11	-	SMRU2075
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.32063	66.5	-	FRGG01	58	6006	5867	12/9/16	3/20/17	Contig	DTU	SAMEA2357354	GCA_900144035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/035/GCA_900144035.1_17	-	-
Acinetobacter baumannii	470	PRJNA308422	308422	Proteobacteria	Gammaproteobacteria	3.65323	39.5	-	MSMF01	973	3651	3371	1/12/17	4/6/17	Contig	CHU A Coruna	SAMN06106566	GCA_001950265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/265/GCA_001950265.1_ASM195026v1	28328989	Ab169_GEIH-2000
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.36505	57.3	-	NFWA01	73	5389	5157	6/9/17	6/12/17	Contig	JCVI	SAMN05960889	GCA_002187835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/835/GCA_002187835.1_ASM218783v1	-	PO1758
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.59349	56.9	-	NFWE01	110	5675	5390	6/9/17	6/12/17	Contig	JCVI	SAMN05960885	GCA_002187855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/855/GCA_002187855.1_ASM218785v1	-	PO1407
Acinetobacter baumannii	470	PRJNA308422	308422	Proteobacteria	Gammaproteobacteria	3.83934	39.6	-	MSMD01	837	3827	3599	1/12/17	4/6/17	Contig	CHU A Coruna	SAMN06106562	GCA_001950295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/295/GCA_001950295.1_ASM195029v1	28328989	Ab122_GEIH-2010
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.32317	66.5	-	FRGH01	85	6029	5867	12/9/16	3/20/17	Contig	DTU	SAMEA2357377	GCA_900144045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/045/GCA_900144045.1_19	-	-
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07552	39.6	-	CIMO01	113	2234	2013	3/21/15	3/11/17	Contig	SC	SAMEA1024967	GCA_001165705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/705/GCA_001165705.1_6714_7_3	-	SMRU747
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.52772	50.4	-	-	42	5900	5394	-	-	Scaffold	NTNU	SAMEA2593966	GCA_000937095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/095/GCA_000937095.2_FHI87	-	FHI87
Mycobacterium tuberculosis BTB08-356	1423492	PRJNA229273	229273	Terrabacteria group	Actinobacteria	4.43146	65.6	-	JKFD01	4	4286	4102	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414908	GCA_000678335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/335/GCA_000678335.1_Myco_tube_BTB08-356_V1	-	BTB08-356
Listeria monocytogenes	1639	PRJDB1729	274452	Terrabacteria group	Firmicutes	2.91167	37.9	-	BAZC01	56	2402	2358	2/3/15	2/3/15	Contig	Tokyo university of marine science and technology	SAMD00000509	GCA_000974325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/325/GCA_000974325.1_ASM97432v1	25492229	F2-382
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.5682	52.2	-	CJKD01	41	4709	4362	3/21/15	2/27/17	Contig	SC	SAMEA1930184	GCA_001164325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/325/GCA_001164325.1_10593_2_1	-	E00-3459
Staphylococcus aureus M0416	1388276	PRJNA216446	216446	Terrabacteria group	Firmicutes	2.8769	32.8	-	JCFE01	53	3009	2848	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325400	GCA_000555765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/765/GCA_000555765.1_Stap_aure_M0416_V1	-	M0416
Staphylococcus aureus M0417	1388277	PRJNA216447	216447	Terrabacteria group	Firmicutes	2.915	32.9	-	JCFF01	68	3073	2925	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325401	GCA_000555785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/785/GCA_000555785.1_Stap_aure_M0417_V1	-	M0417
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.92901	51.8	-	CJMW01	53	5134	4760	3/21/15	2/27/17	Contig	SC	SAMEA2144865	GCA_001164525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/525/GCA_001164525.1_10607_2_54	-	2004-007692
Listeria monocytogenes	1639	PRJNA298656	298656	Terrabacteria group	Firmicutes	2.97874	37.9	-	LLKA01	176	2928	923	10/20/15	10/20/15	Contig	Madurai Kamaraj University	SAMN04166210	GCA_001400985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/400/985/GCA_001400985.1_ASM140098v1	-	LMO9
Mycobacterium tuberculosis BTB08-362	1423493	PRJNA229274	229274	Terrabacteria group	Actinobacteria	4.39178	65.6	-	JKFC01	7	4264	4088	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414909	GCA_000678355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/355/GCA_000678355.1_Myco_tube_BTB08-362_V1	-	BTB08-362
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	4.92756	50.6	-	-	27	5196	4721	-	-	Scaffold	NTNU	SAMEA2593954	GCA_000937135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/135/GCA_000937135.2_FHI74	-	FHI74
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08181	39.6	-	COFF02	150	2301	2064	3/23/15	3/11/17	Contig	SC	SAMEA1462994	GCA_001165725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/725/GCA_001165725.2_7622_5_75	-	ND6017
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.41228	66.4	-	FRGS01	211	6163	5914	12/9/16	3/21/17	Contig	DTU	SAMEA2357663	GCA_900144055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/055/GCA_900144055.1_64	-	-
Acinetobacter baumannii	470	PRJNA308422	308422	Proteobacteria	Gammaproteobacteria	3.57241	39.8	-	MSMG01	1134	3575	3280	1/12/17	4/6/17	Contig	CHU A Coruna	SAMN06106565	GCA_001950315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/315/GCA_001950315.1_ASM195031v1	28328989	Ab166_GEIH-2000
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.50575	57.3	-	NFWL01	107	5596	5359	6/9/17	6/12/17	Contig	JCVI	SAMN05960963	GCA_002187865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/865/GCA_002187865.1_ASM218786v1	-	HB_AB_3196
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.46895	57.1	-	NFWM01	72	5471	5202	6/9/17	6/12/17	Contig	JCVI	SAMN05960964	GCA_002187895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/895/GCA_002187895.1_ASM218789v1	-	HB_4285
Acinetobacter baumannii	470	PRJNA317645	317645	Proteobacteria	Gammaproteobacteria	4.11308	38.9	-	LWSM01	107	3960	3782	2/24/17	2/27/17	Contig	Max von Pettenkofer-Institute	SAMN04589238	GCA_002006635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/635/GCA_002006635.1_ASM200663v1	-	AB-A
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.55862	66.4	-	FRGV01	157	6274	6063	12/9/16	3/21/17	Contig	DTU	SAMEA2357578	GCA_900144065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/065/GCA_900144065.1_38	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0081	39.7	-	CNRZ02	108	2179	1982	3/23/15	3/5/17	Contig	SC	SAMEA1032406	GCA_001165765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/765/GCA_001165765.2_6999_2_22	-	R34-3228
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.35577	50.4	-	-	42	5799	5338	-	-	Scaffold	NTNU	SAMEA2593898	GCA_000937275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/275/GCA_000937275.1_FHI12	-	FHI12
Mycobacterium tuberculosis BTB08-394	1423494	PRJNA229275	229275	Terrabacteria group	Actinobacteria	4.39771	65.6	-	JKFB01	5	4270	4095	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414910	GCA_000678375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/375/GCA_000678375.1_Myco_tube_BTB08-394_V1	-	BTB08-394
Listeria monocytogenes	1639	PRJNA298848	298848	Terrabacteria group	Firmicutes	2.95269	37.9	-	LLVR01	156	2942	942	12/29/15	12/29/15	Contig	Madurai Kamaraj University	SAMN04167096	GCA_001483225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/483/225/GCA_001483225.1_ASM148322v1	-	LMO10
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73174	52.1	-	CJIR01	45	4904	4554	3/21/15	2/27/17	Contig	SC	SAMEA1929451	GCA_001165305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/305/GCA_001165305.1_10592_2_2	-	5504
Staphylococcus aureus M0419	1388278	PRJNA216448	216448	Terrabacteria group	Firmicutes	2.87813	32.8	-	JCFG01	47	3046	2863	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325402	GCA_000555805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/805/GCA_000555805.1_Stap_aure_M0419_V1	-	M0419
Staphylococcus aureus M0420	1388279	PRJNA216449	216449	Terrabacteria group	Firmicutes	2.89439	32.9	-	JCFH01	59	3063	2887	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325403	GCA_000555825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/825/GCA_000555825.1_Stap_aure_M0420_V1	-	M0420
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74617	52.1	-	CJTM01	49	4911	4541	3/21/15	2/27/17	Contig	SC	SAMEA1903833	GCA_001165325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/325/GCA_001165325.1_9475_6_6	-	1025912
Listeria monocytogenes	1639	PRJEB9682	305797	Terrabacteria group	Firmicutes	2.60187	38.1	-	CWNC01	957	-	-	12/12/15	12/12/15	Contig	IZSLER	SAMEA3466601	GCA_001496975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/496/975/GCA_001496975.1_2014_60550_2	-	-
Mycobacterium tuberculosis BTB09-001	1423496	PRJNA229277	229277	Terrabacteria group	Actinobacteria	4.41865	65.6	-	JKEZ01	8	4276	4061	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414912	GCA_000678395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/395/GCA_000678395.1_Myco_tube_BTB09-001_V1	-	BTB09-001
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	4.97382	50.5	-	-	37	5111	4766	-	-	Scaffold	NTNU	SAMEA2593976	GCA_000937415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/415/GCA_000937415.1_FHI98	-	FHI98
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09927	39.6	-	COEM02	189	2295	2081	3/22/15	3/11/17	Contig	SC	SAMEA1463019	GCA_001165825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/825/GCA_001165825.2_7622_4_8	-	LE4007
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.75897	66.1	-	FRGN01	160	6472	6240	12/9/16	3/21/17	Contig	DTU	SAMEA2357653	GCA_900144075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/075/GCA_900144075.1_56	-	-
Acinetobacter baumannii	470	PRJNA317645	317645	Proteobacteria	Gammaproteobacteria	4.10438	38.9	-	LWSO01	86	3955	3779	2/24/17	2/27/17	Contig	Max von Pettenkofer-Institute	SAMN04622656	GCA_002006655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/655/GCA_002006655.1_ASM200665v1	-	-
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.19519	57.6	-	NFWO01	37	5135	4971	6/9/17	6/12/17	Contig	JCVI	SAMN05960958	GCA_002187915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/915/GCA_002187915.1_ASM218791v1	-	HB_1051
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.47711	57.3	-	NFWZ01	61	5469	5219	6/9/17	6/12/17	Contig	JCVI	SAMN05960938	GCA_002187975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/975/GCA_002187975.1_ASM218797v1	-	G4606
Acinetobacter baumannii	470	PRJNA317645	317645	Proteobacteria	Gammaproteobacteria	4.10721	38.9	-	LWSN01	91	3949	3777	2/24/17	2/27/17	Contig	Max von Pettenkofer-Institute	SAMN04589239	GCA_002006665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/665/GCA_002006665.1_ASM200666v1	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.62001	66.4	-	FRGP01	75	6284	6123	12/9/16	3/21/17	Contig	DTU	SAMEA2357502	GCA_900144085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/085/GCA_900144085.1_31	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.10982	39.5	-	COEC02	189	2267	2045	3/23/15	3/5/17	Contig	SC	SAMEA1463070	GCA_001165965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/965/GCA_001165965.2_7622_4_4	-	GL3078
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.50266	50.6	-	-	40	5852	5445	-	-	Scaffold	NTNU	SAMEA2593945	GCA_000937715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/715/GCA_000937715.2_FHI65	-	FHI65
Mycobacterium tuberculosis BTB09-036	1423497	PRJNA229278	229278	Terrabacteria group	Actinobacteria	4.43097	65.5	-	JKEY01	4	4290	4092	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414913	GCA_000678415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/415/GCA_000678415.1_Myco_tube_BTB09-036_V1	-	BTB09-036
Listeria monocytogenes	1639	PRJNA212117	212117	Terrabacteria group	Firmicutes	2.90087	38	-	LYVE01	1	2880	2783	6/7/16	6/7/16	Contig	"Enteric Diseases Laboratory Branch, Centers for Disease Control and Prevention"	SAMN03253348	GCA_001659565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/565/GCA_001659565.1_PDT000044982.1	-	PNUSAL001142
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7326	52	-	CJXL01	50	4895	4545	3/21/15	2/27/17	Contig	SC	SAMEA2057250	GCA_001165605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/605/GCA_001165605.1_9953_5_35	-	A358
Staphylococcus aureus M0421	1388280	PRJNA216450	216450	Terrabacteria group	Firmicutes	2.86848	32.8	-	JCFI01	62	3062	2884	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325404	GCA_000555845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/845/GCA_000555845.1_Stap_aure_M0421_V1	-	M0421
Staphylococcus aureus M0423	1388281	PRJNA216451	216451	Terrabacteria group	Firmicutes	2.87139	32.9	-	JCFJ01	48	3028	2854	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325405	GCA_000555865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/865/GCA_000555865.1_Stap_aure_M0423_V1	-	M0423
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93409	51.8	-	CIVX01	57	5131	4740	3/21/15	2/27/17	Contig	SC	SAMEA2067826	GCA_001165745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/745/GCA_001165745.1_10209_5_51	-	UI286
Listeria monocytogenes	1639	PRJNA215355	215355	Terrabacteria group	Firmicutes	2.90466	38	-	MAJL01	1	2886	2790	6/27/16	6/27/16	Contig	FDA/CFSAN	SAMN05150248	GCA_001676935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/935/GCA_001676935.1_PDT000131192.1	-	FSIS1606618
Mycobacterium tuberculosis BTB09-058	1423498	PRJNA229279	229279	Terrabacteria group	Actinobacteria	4.40273	65.5	-	JKEX01	8	4291	4088	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414914	GCA_000678435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/435/GCA_000678435.1_Myco_tube_BTB09-058_V1	-	BTB09-058
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.66007	50.5	-	-	46	5967	5518	-	-	Scaffold	NTNU	SAMEA2593908	GCA_000937855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/855/GCA_000937855.1_FHI23	-	FHI23
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09292	39.7	-	CMRN01	62	2327	2092	3/23/15	3/11/17	Contig	SC	SAMEA2062170	GCA_001166005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/005/GCA_001166005.1_9803_8_42	-	19F
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.60808	66.3	-	FRGO01	171	6340	6115	12/9/16	3/21/17	Contig	DTU	SAMEA2357469	GCA_900144095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/095/GCA_900144095.1_28	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.04061	38.9	-	MSMS01	84	3913	3749	3/3/17	3/6/17	Contig	JCVI	SAMN06117706	GCA_002014105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/105/GCA_002014105.1_ASM201410v1	-	ABUH393
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.46087	57.3	-	NFXG01	79	5498	5241	6/9/17	6/12/17	Contig	JCVI	SAMN05960929	GCA_002187995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/187/995/GCA_002187995.1_ASM218799v1	-	G4049
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.47873	57.3	-	NFXC01	65	5469	5220	6/9/17	6/12/17	Contig	JCVI	SAMN05960935	GCA_002188015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/015/GCA_002188015.1_ASM218801v1	-	G4597
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.18023	39.1	-	MSMV01	230	4110	3888	3/3/17	3/6/17	Contig	JCVI	SAMN06117709	GCA_002014155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/155/GCA_002014155.1_ASM201415v1	-	ABUH402
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.61194	66.4	-	FRGL01	103	6280	6118	12/9/16	3/21/17	Contig	DTU	SAMEA2357611	GCA_900144105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/105/GCA_900144105.1_41	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05904	39.6	-	CODS02	150	2221	2019	3/22/15	3/5/17	Contig	SC	SAMEA1463242	GCA_001166085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/085/GCA_001166085.2_7622_4_33	-	LE4106
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.3392	50.4	-	-	44	5698	5214	-	-	Scaffold	NTNU	SAMEA2593962	GCA_000938695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/695/GCA_000938695.1_FHI83	-	FHI83
Mycobacterium tuberculosis BTB09-085	1423499	PRJNA229280	229280	Terrabacteria group	Actinobacteria	4.415	65.5	-	JKEW01	5	4306	4098	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414915	GCA_000678455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/455/GCA_000678455.1_Myco_tube_BTB09-085_V1	-	BTB09-085
Listeria monocytogenes	1639	PRJNA329415	329415	Terrabacteria group	Firmicutes	2.56287	37.9	-	MDNT01	28	2577	2516	8/24/16	8/24/16	Contig	University of British Columbia	SAMN05410828	GCA_001712085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/085/GCA_001712085.1_ASM171208v1	-	A528
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74696	52.1	-	CJTN01	47	4908	4538	3/21/15	2/27/17	Contig	SC	SAMEA1903890	GCA_001166045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/045/GCA_001166045.1_9475_6_62	-	1028143
Staphylococcus aureus M0425	1388282	PRJNA216452	216452	Terrabacteria group	Firmicutes	2.84594	32.8	-	JCFK01	34	3007	2834	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325406	GCA_000555885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/885/GCA_000555885.1_Stap_aure_M0425_V1	-	M0425
Staphylococcus aureus M0426	1388283	PRJNA216453	216453	Terrabacteria group	Firmicutes	2.95182	32.7	-	JCFL01	84	3136	2923	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325407	GCA_000555905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/905/GCA_000555905.1_Stap_aure_M0426_V1	-	M0426
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.7222	52	-	CJOD01	48	4870	4518	3/21/15	2/27/17	Contig	SC	SAMEA1406335	GCA_001166205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/205/GCA_001166205.1_7468_7_70	-	IB5357
Listeria monocytogenes	1639	PRJNA356197	356197	Terrabacteria group	Firmicutes	2.95052	38	-	MVDY01	10	3052	1257	4/14/17	4/14/17	Contig	Madurai kamaraj university	SAMN06109051	GCA_002092785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/785/GCA_002092785.1_ASM209278v1	-	MKU11
Mycobacterium tuberculosis BTB09-086	1423500	PRJNA229281	229281	Terrabacteria group	Actinobacteria	4.40068	65.5	-	JKEV01	5	4298	4100	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414916	GCA_000678475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/475/GCA_000678475.1_Myco_tube_BTB09-086_V1	-	BTB09-086
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.35518	50.4	-	-	41	5803	5292	-	-	Scaffold	NTNU	SAMEA2593910	GCA_000938995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/995/GCA_000938995.1_FHI25	-	FHI25
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.0551	39.7	-	CRTE01	50	2263	2032	3/23/15	3/10/17	Contig	SC	SAMEA1025128	GCA_001166165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/165/GCA_001166165.1_6805_4_13	-	SMRU1669
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.74408	66.1	-	FRGM01	122	6518	6305	12/9/16	3/20/17	Contig	DTU	SAMEA2357438	GCA_900144115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/115/GCA_900144115.1_25	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.95551	38.9	-	MSNB01	122	3882	3691	3/3/17	3/6/17	Contig	JCVI	SAMN06117715	GCA_002014175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/175/GCA_002014175.1_ASM201417v1	-	ABUH426
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.58336	57.2	-	NFXK01	86	5611	5346	6/9/17	6/12/17	Contig	JCVI	SAMN05960925	GCA_002188055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/055/GCA_002188055.1_ASM218805v1	-	G3051
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.85705	56.9	-	NFXQ01	111	5915	5656	6/9/17	6/12/17	Contig	JCVI	SAMN05960911	GCA_002188075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/075/GCA_002188075.1_ASM218807v1	-	G186
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.06505	38.9	-	MSNC01	82	3952	3808	3/3/17	3/6/17	Contig	JCVI	SAMN06117716	GCA_002014195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/195/GCA_002014195.1_ASM201419v1	-	ABUH432
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.75714	66.2	-	FRGX01	145	6468	6231	12/9/16	5/22/17	Contig	DTU	SAMEA2357651	GCA_900144125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/125/GCA_900144125.1_54	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10678	39.7	-	CRKM01	57	2272	1980	3/22/15	3/10/17	Contig	SC	SAMEA1025146	GCA_001166325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/325/GCA_001166325.1_6753_3_7	-	SMRU1519
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.44827	50.4	-	-	46	5893	5413	-	-	Scaffold	NTNU	SAMEA2593896	GCA_000939195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/195/GCA_000939195.1_FHI9	-	FHI9
Mycobacterium tuberculosis BTB09-091	1423501	PRJNA229282	229282	Terrabacteria group	Actinobacteria	4.41684	65.5	-	JKEU01	4	4303	4109	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414917	GCA_000678495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/495/GCA_000678495.1_Myco_tube_BTB09-091_V1	-	BTB09-091
Listeria monocytogenes	1639	PRJNA356198	356198	Terrabacteria group	Firmicutes	3.09633	37.8	-	MVDZ01	88	3203	1474	4/14/17	4/14/17	Contig	Madurai kamaraj university	SAMN06109052	GCA_002092815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/815/GCA_002092815.1_ASM209281v1	-	MKU13
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7463	52.1	-	CJSE01	50	4915	4541	3/21/15	2/27/17	Contig	SC	SAMEA1903838	GCA_001166345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/345/GCA_001166345.1_9475_6_12	-	1021106
Staphylococcus aureus M0428	1388284	PRJNA216454	216454	Terrabacteria group	Firmicutes	2.84556	32.8	-	JCFM01	35	2984	2842	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325408	GCA_000555925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/925/GCA_000555925.1_Stap_aure_M0428_V1	-	M0428
Staphylococcus aureus M0430	1388286	PRJNA216456	216456	Terrabacteria group	Firmicutes	2.87683	32.9	-	JCFN01	53	3037	2838	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325410	GCA_000555945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/945/GCA_000555945.1_Stap_aure_M0430_V1	-	M0430
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3164	204701	Proteobacteria	Gammaproteobacteria	4.93379	51.8	-	CJRF01	53	5131	4754	3/21/15	2/27/17	Contig	SC	SAMEA1571988	GCA_001166405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/405/GCA_001166405.1_8525_3_42	-	Ke463
Listeria monocytogenes	1639	PRJNA231221	231221	Terrabacteria group	Firmicutes	3.0462	38	-	NJFQ01	5	3108	1928	6/23/17	6/23/17	Contig	US Food and Drug Administration 	SAMN06173364	GCA_002206565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/565/GCA_002206565.1_ASM220656v1	-	FDAARGOS_351
Mycobacterium tuberculosis BTB09-151	1423502	PRJNA229283	229283	Terrabacteria group	Actinobacteria	4.40775	65.6	-	JKET01	6	4291	4125	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414918	GCA_000678515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/515/GCA_000678515.1_Myco_tube_BTB09-151_V1	-	BTB09-151
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.29712	50.7	-	-	42	5796	5132	-	-	Scaffold	NTNU	SAMEA2593952	GCA_000939255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/255/GCA_000939255.1_FHI72	-	FHI72
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.11144	39.6	-	CLLS01	42	2342	2110	3/21/15	3/11/17	Contig	SC	SAMEA1029058	GCA_001166365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/365/GCA_001166365.1_6938_6_13	-	SMRU2677
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.61612	66.4	-	FRGJ01	87	6289	6126	12/9/16	3/20/17	Contig	DTU	SAMEA2357428	GCA_900144135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/135/GCA_900144135.1_24	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.06996	38.9	-	MSND01	83	3944	3803	3/3/17	3/6/17	Contig	JCVI	SAMN06117717	GCA_002014235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/235/GCA_002014235.1_ASM201423v1	-	ABUH435
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.62369	57.1	-	NFXR01	89	5631	5377	6/9/17	6/12/17	Contig	JCVI	SAMN05960910	GCA_002188095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/095/GCA_002188095.1_ASM218809v1	-	G160
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.72885	57	-	NFXU01	159	5896	5575	6/9/17	6/12/17	Contig	JCVI	SAMN05960918	GCA_002188105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/105/GCA_002188105.1_ASM218810v1	-	G1457
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.81824	38.9	-	MSNH01	112	3674	3530	3/3/17	3/6/17	Contig	JCVI	SAMN06117773	GCA_002014245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/245/GCA_002014245.1_ASM201424v1	-	ABUH636
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.75867	66.1	-	FRGY01	176	6483	6236	12/9/16	3/21/17	Contig	DTU	SAMEA2357654	GCA_900144145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/145/GCA_900144145.1_57	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07498	39.7	-	COCP02	142	2253	2041	3/22/15	3/11/17	Contig	SC	SAMEA1463187	GCA_001166445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/445/GCA_001166445.2_7622_3_78	-	GL3012
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.50714	50.4	-	-	36	5947	5502	-	-	Scaffold	NTNU	SAMEA2593926	GCA_000939755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/755/GCA_000939755.1_FHI43	-	FHI43
Mycobacterium tuberculosis BTB09-157	1423503	PRJNA229284	229284	Terrabacteria group	Actinobacteria	4.4062	65.6	-	JKES01	9	4290	4092	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414919	GCA_000678535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/535/GCA_000678535.1_Myco_tube_BTB09-157_V1	-	BTB09-157
Listeria monocytogenes	1639	PRJEB20033	379569	Terrabacteria group	Firmicutes	3.51285	38.4	-	FWEC01	2107	-	-	3/21/17	3/21/17	Contig	UNIMI	SAMEA103917904	GCA_900169735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/735/GCA_900169735.1_5476	-	-
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.91115	51.9	-	CJLH01	54	5122	4751	3/21/15	2/27/17	Contig	SC	SAMEA1930216	GCA_001166665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/665/GCA_001166665.1_10593_2_69	-	Jun-90
Staphylococcus aureus M0431	1388287	PRJNA216457	216457	Terrabacteria group	Firmicutes	2.86641	32.8	-	JCFO01	38	3027	2856	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325411	GCA_000555965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/965/GCA_000555965.1_Stap_aure_M0431_V1	-	M0431
Staphylococcus aureus M0433	1388288	PRJNA216458	216458	Terrabacteria group	Firmicutes	2.85211	32.8	-	JCFP01	34	3008	2850	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325412	GCA_000555985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/985/GCA_000555985.1_Stap_aure_M0433_V1	-	M0433
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93257	51.8	-	CJWR01	74	5125	4742	3/21/15	2/27/17	Contig	SC	SAMEA2058617	GCA_001167865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/865/GCA_001167865.1_9870_8_94	-	2012-010406
Listeria monocytogenes	1639	PRJNA246743	246743	Terrabacteria group	Firmicutes	2.30829	37.9	-	JNHA01	30	2264	2201	12/14/15	12/14/15	Scaffold	Centers for Disease Control and Prevention	SAMN02821156	GCA_001466235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/235/GCA_001466235.1_ASM146623v1	-	L2663
Mycobacterium tuberculosis BTB09-184	1423504	PRJNA229285	229285	Terrabacteria group	Actinobacteria	4.41866	65.5	-	JKER01	5	4294	4106	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414920	GCA_000678555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/555/GCA_000678555.1_Myco_tube_BTB09-184_V1	-	BTB09-184
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.65928	50.5	-	-	51	6196	5720	-	-	Scaffold	NTNU	SAMEA2593959	GCA_000939955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/955/GCA_000939955.1_FHI79	-	FHI79
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.9944	39.7	-	CNYK02	108	2177	1978	3/23/15	3/5/17	Contig	SC	SAMEA1463257	GCA_001166525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/525/GCA_001166525.2_7553_4_30	-	NP7010
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.427	66.4	-	FRHC01	124	6117	5927	12/9/16	3/21/17	Contig	DTU	SAMEA2357662	GCA_900144155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/155/GCA_900144155.1_63	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.96112	38.9	-	MSMR01	124	3890	3700	3/3/17	3/6/17	Contig	JCVI	SAMN06117705	GCA_002014265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/265/GCA_002014265.1_ASM201426v1	-	ABUH390
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.59604	57.1	-	NFXY01	144	5681	5362	6/9/17	6/12/17	Contig	JCVI	SAMN05960908	GCA_002188135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/135/GCA_002188135.1_ASM218813v1	-	CAB1505
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.6539	57.1	-	NFXZ01	114	5796	5511	6/9/17	6/12/17	Contig	JCVI	SAMN05960907	GCA_002188145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/145/GCA_002188145.1_ASM218814v1	-	CAB1458
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.94833	38.9	-	MSNI01	110	3822	3639	3/3/17	3/6/17	Contig	JCVI	SAMN06117774	GCA_002014275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/275/GCA_002014275.1_ASM201427v1	-	ABUH639
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.42453	66.4	-	FRGR01	110	6092	5929	12/9/16	3/21/17	Contig	DTU	SAMEA2357666	GCA_900144165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/165/GCA_900144165.1_67	-	-
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09943	39.7	-	CKTK01	91	2333	2124	3/21/15	3/4/17	Contig	SC	SAMEA1026142	GCA_001166765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/765/GCA_001166765.1_6823_1_5	-	SMRU1853
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	4.87686	50.7	-	-	22	5036	4727	-	-	Scaffold	NTNU	SAMEA2593968	GCA_000940035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/035/GCA_000940035.2_FHI89	-	FHI89
Mycobacterium tuberculosis BTB09-230	1423505	PRJNA229286	229286	Terrabacteria group	Actinobacteria	4.39739	65.6	-	JKEQ01	10	4262	4090	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414921	GCA_000678575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/575/GCA_000678575.1_Myco_tube_BTB09-230_V1	-	BTB09-230
Listeria monocytogenes	1639	PRJNA203445	203445	Terrabacteria group	Firmicutes	3.35093	37.9	-	MJTJ01	25	3328	3266	9/30/16	9/30/16	Scaffold	University of California at Davis	SAMN03357059	GCA_001751945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/751/945/GCA_001751945.1_ASM175194v1	-	BCW_2383
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3164	204701	Proteobacteria	Gammaproteobacteria	4.9411	51.8	-	CJRB01	49	5136	4750	3/21/15	2/27/17	Contig	SC	SAMEA1571983	GCA_001168305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/305/GCA_001168305.1_8525_3_32	-	Ke453
Staphylococcus aureus M0435	1388290	PRJNA216460	216460	Terrabacteria group	Firmicutes	2.83596	32.8	-	JCFQ01	35	2964	2800	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325414	GCA_000556005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/005/GCA_000556005.1_Stap_aure_M0435_V1	-	M0435
Staphylococcus aureus M0437	1388291	PRJNA216461	216461	Terrabacteria group	Firmicutes	2.9425	32.7	-	JCFR01	80	3125	2931	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325415	GCA_000556025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/025/GCA_000556025.1_Stap_aure_M0437_V1	-	M0437
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73855	51.9	-	CJJP01	48	4916	4544	3/21/15	2/27/17	Contig	SC	SAMEA1930180	GCA_001168365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/365/GCA_001168365.1_10592_2_55	-	E98-11555
Mycobacterium tuberculosis BTB09-382	1423507	PRJNA229288	229288	Terrabacteria group	Actinobacteria	4.40144	65.6	-	JKEO01	6	4281	4115	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414923	GCA_000678595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/595/GCA_000678595.1_Myco_tube_BTB09-382_V1	-	BTB09-382
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.49844	50.5	-	-	50	6016	5516	-	-	Scaffold	NTNU	SAMEA2593905	GCA_000940115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/115/GCA_000940115.1_FHI20	-	FHI20
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.13944	39.6	-	CKTX01	60	2335	2114	3/21/15	3/4/17	Contig	SC	SAMEA1025846	GCA_001166865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/865/GCA_001166865.1_6823_2_12	-	SMRU1884
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.61447	66.4	-	FRGW01	108	6299	6119	12/9/16	3/21/17	Contig	DTU	SAMEA2357668	GCA_900144175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/175/GCA_900144175.1_75	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.7165	39	-	MSMT01	32	3505	3381	3/3/17	3/6/17	Contig	JCVI	SAMN06117707	GCA_002014315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/315/GCA_002014315.1_ASM201431v1	-	ABUH396
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.54521	57.2	-	NFYF01	51	5567	5316	6/9/17	6/12/17	Contig	JCVI	SAMN05960901	GCA_002188175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/175/GCA_002188175.1_ASM218817v1	-	BH2937
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.4776	57.2	-	NFYG01	75	5547	5261	6/9/17	6/12/17	Contig	JCVI	SAMN05960900	GCA_002188185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/185/GCA_002188185.1_ASM218818v1	-	BH2511
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.04857	38.9	-	MSMU01	108	3912	3721	3/3/17	3/6/17	Contig	JCVI	SAMN06117708	GCA_002014325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/325/GCA_002014325.1_ASM201432v1	-	ABUH399
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.32552	66.5	-	FRGQ01	81	6026	5870	12/9/16	3/20/17	Contig	DTU	SAMEA2357341	GCA_900144185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/185/GCA_900144185.1_16	-	-
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.13012	39.6	-	CKWV01	59	2359	2132	3/21/15	3/4/17	Contig	SC	SAMEA1026013	GCA_001166925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/925/GCA_001166925.1_6823_6_11	-	SMRU1979
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.53875	50.3	-	-	55	6047	5546	-	-	Scaffold	NTNU	SAMEA2593901	GCA_000940255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/255/GCA_000940255.1_FHI15	-	FHI15
Mycobacterium tuberculosis BTB09-453	1423508	PRJNA229289	229289	Terrabacteria group	Actinobacteria	4.4104	65.6	-	JKEN01	87	4336	4110	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414924	GCA_000678615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/615/GCA_000678615.1_Myco_tube_BTB09-453_V1	-	BTB09-453
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9347	51.8	-	CIVW01	73	5129	4741	3/21/15	2/27/17	Contig	SC	SAMEA2066532	GCA_001168785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/785/GCA_001168785.1_10209_5_50	-	UI2824
Staphylococcus aureus M0439	1388292	PRJNA216462	216462	Terrabacteria group	Firmicutes	2.95326	32.9	-	JCFS01	62	3124	2926	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325416	GCA_000556045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/045/GCA_000556045.1_Stap_aure_M0439_V1	-	M0439
Staphylococcus aureus M0440	1388293	PRJNA216463	216463	Terrabacteria group	Firmicutes	2.89701	32.9	-	JCFT01	52	3079	2888	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325417	GCA_000556065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/065/GCA_000556065.1_Stap_aure_M0440_V1	-	M0440
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.78773	52.1	-	CJZF01	42	4929	4572	3/21/15	2/27/17	Contig	SC	SAMEA1964060	GCA_001168825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/825/GCA_001168825.1_9953_5_92	-	LNT72
Mycobacterium tuberculosis BTB09-485	1423509	PRJNA229290	229290	Terrabacteria group	Actinobacteria	4.3859	65.6	-	JKEM01	72	4318	4103	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414925	GCA_000678635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/635/GCA_000678635.1_Myco_tube_BTB09-485_V1	-	BTB09-485
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.54683	50.3	-	-	60	6068	5572	-	-	Scaffold	NTNU	SAMEA2593950	GCA_000940655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/655/GCA_000940655.1_FHI70	-	FHI70
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.21056	39.4	-	CLXP01	89	2442	2203	3/21/15	3/4/17	Contig	SC	SAMEA1029165	GCA_001166945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/945/GCA_001166945.1_6983_6_27	-	SMRU2331
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.4781	66.3	-	FRGZ01	233	6284	5987	12/9/16	3/21/17	Contig	DTU	SAMEA2357672	GCA_900144195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/195/GCA_900144195.1_79	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.99586	38.9	-	MSMY01	56	3866	3730	3/3/17	3/6/17	Contig	JCVI	SAMN06117712	GCA_002014345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/345/GCA_002014345.1_ASM201434v1	-	ABUH414
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.58005	57.1	-	NFYH01	101	5654	5400	6/9/17	6/12/17	Contig	JCVI	SAMN05960899	GCA_002188235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/235/GCA_002188235.1_ASM218823v1	-	BH2308
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.70522	57.1	-	NFYK01	140	5826	5528	6/9/17	6/12/17	Contig	JCVI	SAMN05960948	GCA_002188245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/245/GCA_002188245.1_ASM218824v1	-	AK_B_SD_011
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.96105	38.9	-	MSMW01	119	3885	3695	3/3/17	3/6/17	Contig	JCVI	SAMN06117710	GCA_002014355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/355/GCA_002014355.1_ASM201435v1	-	ABUH405
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.46626	66.3	-	FRHB01	189	6246	5991	12/9/16	3/21/17	Contig	DTU	SAMEA2357671	GCA_900144205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/205/GCA_900144205.1_78	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06181	39.6	-	CNWB02	152	2271	2060	3/23/15	3/11/17	Contig	SC	SAMEA1032649	GCA_001167065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/065/GCA_001167065.2_7001_1_15	-	R34-3092
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.50279	50.6	-	-	51	5946	5446	-	-	Scaffold	NTNU	SAMEA2593895	GCA_000941395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/395/GCA_000941395.1_FHI8	-	FHI8
Mycobacterium tuberculosis BTB09-553	1423510	PRJNA229291	229291	Terrabacteria group	Actinobacteria	4.40698	65.6	-	JKEL01	7	4277	4111	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414926	GCA_000678655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/655/GCA_000678655.1_Myco_tube_BTB09-553_V1	-	BTB09-553
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74679	52.1	-	CJTG01	50	4912	4550	3/21/15	2/27/17	Contig	SC	SAMEA1903885	GCA_001169645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/645/GCA_001169645.1_9475_6_58	-	1020366
Staphylococcus aureus M0441	1388294	PRJNA216464	216464	Terrabacteria group	Firmicutes	2.87489	32.8	-	JCFU01	66	3057	2880	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325418	GCA_000556085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/085/GCA_000556085.1_Stap_aure_M0441_V1	-	M0441
Staphylococcus aureus M0442	1388295	PRJNA216465	216465	Terrabacteria group	Firmicutes	2.78839	32.8	-	JCFV01	28	2911	2747	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325419	GCA_000556105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/105/GCA_000556105.1_Stap_aure_M0442_V1	-	M0442
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72304	52.1	-	CJXM01	47	4885	4543	3/21/15	2/27/17	Contig	SC	SAMEA2056364	GCA_001170105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/105/GCA_001170105.1_9953_5_36	-	A359
Mycobacterium tuberculosis BTB09-554	1423511	PRJNA229292	229292	Terrabacteria group	Actinobacteria	4.41713	65.6	-	JKEK01	55	4326	4126	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414927	GCA_000678675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/675/GCA_000678675.1_Myco_tube_BTB09-554_V1	-	BTB09-554
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.74051	50.4	-	-	27	5892	5522	-	-	Scaffold	NTNU	SAMEA2593971	GCA_000941575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/575/GCA_000941575.1_FHI92	-	FHI92
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.16162	39.5	-	CLMG01	51	2388	2177	3/21/15	3/4/17	Contig	SC	SAMEA1029028	GCA_001167125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/125/GCA_001167125.1_6938_7_10	-	SMRU2698
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.47535	66.3	-	FRHA01	250	6294	5982	12/9/16	3/21/17	Contig	DTU	SAMEA2357673	GCA_900144215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/215/GCA_900144215.1_80	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.8965	38.9	-	MSNA01	108	3782	3657	3/3/17	3/6/17	Contig	JCVI	SAMN06117714	GCA_002014395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/395/GCA_002014395.1_ASM201439v1	-	ABUH420
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.31236	57.4	-	NFYL01	68	5241	5028	6/9/17	6/12/17	Contig	JCVI	SAMN05960951	GCA_002188255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/255/GCA_002188255.1_ASM218825v1	-	AK_991
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.46668	57.1	-	NFYP01	70	5458	5193	6/9/17	6/12/17	Contig	JCVI	SAMN05960956	GCA_002188295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/295/GCA_002188295.1_ASM218829v1	-	AK_1024
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.73662	38.9	-	MSMZ01	100	3581	3448	3/3/17	3/6/17	Contig	JCVI	SAMN06117713	GCA_002014405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/405/GCA_002014405.1_ASM201440v1	-	ABUH417
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.74273	66.2	-	FRGT01	114	6506	6308	12/9/16	3/21/17	Contig	DTU	SAMEA2357526	GCA_900144225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/225/GCA_900144225.1_33	-	-
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.20762	39.5	-	CLMV01	60	2461	2213	3/21/15	3/4/17	Contig	SC	SAMEA1028611	GCA_001167145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/145/GCA_001167145.1_6938_7_24	-	SMRU2712
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.24293	50.5	-	-	45	5616	5120	-	-	Scaffold	NTNU	SAMEA2593893	GCA_000941895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/895/GCA_000941895.1_FHI6	-	FHI6
Mycobacterium tuberculosis BTB10-001	1423513	PRJNA229294	229294	Terrabacteria group	Actinobacteria	4.43214	65.5	-	JKEI01	7	4305	4104	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414929	GCA_000678695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/695/GCA_000678695.1_Myco_tube_BTB10-001_V1	-	BTB10-001
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72519	52	-	CIVK01	42	4888	4520	3/21/15	2/27/17	Contig	SC	SAMEA2067820	GCA_001170145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/145/GCA_001170145.1_10209_5_33	-	UI1965
Staphylococcus aureus M0445	1388297	PRJNA216467	216467	Terrabacteria group	Firmicutes	2.89426	32.9	-	JCFW01	65	3067	2883	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325421	GCA_000556125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/125/GCA_000556125.1_Stap_aure_M0445_V1	-	M0445
Staphylococcus aureus M0447	1388298	PRJNA216468	216468	Terrabacteria group	Firmicutes	2.8695	32.9	-	JCFX01	32	3017	2847	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325422	GCA_000556145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/145/GCA_000556145.1_Stap_aure_M0447_V1	-	M0447
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93229	51.8	-	CJWP01	67	5128	4743	3/21/15	2/27/17	Contig	SC	SAMEA2055782	GCA_001170245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/245/GCA_001170245.1_9870_8_93	-	2005-010317
Mycobacterium tuberculosis BTB10-005	1423514	PRJNA229295	229295	Terrabacteria group	Actinobacteria	4.40991	65.6	-	JKEH01	6	4275	4108	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414930	GCA_000678715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/715/GCA_000678715.1_Myco_tube_BTB10-005_V1	-	BTB10-005
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.52948	50.5	-	-	47	5923	5374	-	-	Scaffold	NTNU	SAMEA2593961	GCA_000941935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/935/GCA_000941935.1_FHI82	-	FHI82
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.04467	39.6	-	CMPP01	93	2256	2043	3/22/15	3/11/17	Contig	SC	SAMEA2061488	GCA_001167225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/225/GCA_001167225.1_9803_7_6	-	35F
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.49628	66.4	-	FRHD01	98	6201	6008	12/9/16	3/21/17	Contig	DTU	SAMEA2357676	GCA_900144235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/235/GCA_900144235.1_82	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.99861	39	-	MSNE01	78	3856	3716	3/3/17	3/6/17	Contig	JCVI	SAMN06117718	GCA_002014435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/435/GCA_002014435.1_ASM201443v1	-	ABUH438
Klebsiella pneumoniae	573	PRJNA360320	360320	Proteobacteria	Gammaproteobacteria	5.7311	57	-	MSZC01	239	5810	5514	6/9/17	6/12/17	Contig	UR12SP37-EA7361	SAMN06209081	GCA_002189255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/255/GCA_002189255.1_ASM218925v1	-	C11-E7-15
Klebsiella pneumoniae	573	PRJNA360291	360291	Proteobacteria	Gammaproteobacteria	5.82692	56.8	-	MSYX01	280	5898	5618	6/9/17	6/12/17	Contig	UR12SP37-EA7361	SAMN06208379	GCA_002189265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/265/GCA_002189265.1_ASM218926v1	-	C6-E2-14
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.04496	38.9	-	MSNF01	77	3929	3781	3/3/17	3/6/17	Contig	JCVI	SAMN06117719	GCA_002014445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/445/GCA_002014445.1_ASM201444v1	-	ABUH441
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.47381	66.3	-	FRHJ01	259	6294	5971	12/9/16	3/21/17	Contig	DTU	SAMEA2357674	GCA_900144245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/245/GCA_900144245.1_81	-	-
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.06823	39.7	-	CKNJ01	54	2308	2075	3/21/15	3/10/17	Contig	SC	SAMEA1023866	GCA_001167245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/245/GCA_001167245.1_6664_1_11	-	32A
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.00308	50.8	-	-	25	5164	4806	-	-	Scaffold	NTNU	SAMEA2593939	GCA_000941995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/995/GCA_000941995.1_FHI59	-	FHI59
Mycobacterium tuberculosis BTB10-097	1423516	PRJNA229297	229297	Terrabacteria group	Actinobacteria	4.41691	65.5	-	JKEF01	5	4296	4112	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414932	GCA_000678735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/735/GCA_000678735.1_Myco_tube_BTB10-097_V1	-	BTB10-097
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB4240	222606	Proteobacteria	Gammaproteobacteria	4.76624	52.1	-	CJDI01	42	4926	4564	3/21/15	2/27/17	Contig	SC	SAMEA2146183	GCA_001170345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/345/GCA_001170345.1_10541_1_75	-	ST860/95
Staphylococcus aureus M0448	1388299	PRJNA216469	216469	Terrabacteria group	Firmicutes	2.89937	32.8	-	JCFY01	50	3082	2905	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325423	GCA_000556165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/165/GCA_000556165.1_Stap_aure_M0448_V1	-	M0448
Staphylococcus aureus M0449	1388300	PRJNA216470	216470	Terrabacteria group	Firmicutes	2.93358	32.9	-	JCFZ01	66	3100	2917	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325424	GCA_000556185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/185/GCA_000556185.1_Stap_aure_M0449_V1	-	M0449
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69721	52.1	-	CJMS01	49	4858	4502	3/21/15	2/27/17	Contig	SC	SAMEA1971143	GCA_001170925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/925/GCA_001170925.1_10607_2_34	-	D54782
Mycobacterium tuberculosis BTB10-120	1423517	PRJNA229298	229298	Terrabacteria group	Actinobacteria	4.42814	65.5	-	JKEE01	7	4275	4090	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414933	GCA_000678755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/755/GCA_000678755.1_Myco_tube_BTB10-120_V1	-	BTB10-120
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.2641	50.8	-	-	32	5554	5074	-	-	Scaffold	NTNU	SAMEA2593913	GCA_000942915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/915/GCA_000942915.1_FHI29	-	FHI29
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.14342	39.7	-	CNNO02	165	2273	1989	3/23/15	3/11/17	Contig	SC	SAMEA1032730	GCA_001167365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/365/GCA_001167365.2_6925_1_58	-	R34-3039
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.4243	66.3	-	FRHG01	153	6176	5936	12/9/16	3/21/17	Contig	DTU	SAMEA2357680	GCA_900144255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/255/GCA_900144255.1_85	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.87145	39	-	MSNK01	92	3711	3576	3/3/17	3/6/17	Contig	JCVI	SAMN06117776	GCA_002014475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/475/GCA_002014475.1_ASM201447v1	-	ABUH645
Klebsiella pneumoniae	573	PRJNA360369	360369	Proteobacteria	Gammaproteobacteria	5.66508	57.1	-	MSZD01	220	5701	5433	6/9/17	6/12/17	Contig	UR12SP37-EA7361	SAMN06209419	GCA_002189305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/305/GCA_002189305.1_ASM218930v1	-	C12-E8-15
Klebsiella pneumoniae	573	PRJNA360370	360370	Proteobacteria	Gammaproteobacteria	5.37158	57.4	-	MSZE01	210	5381	5135	6/9/17	6/12/17	Contig	UR12SP37-EA7361	SAMN06209420	GCA_002189325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/325/GCA_002189325.1_ASM218932v1	-	C13-E9-15
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.96592	38.8	-	MSNG01	109	3836	3653	3/3/17	3/6/17	Contig	JCVI	SAMN06117772	GCA_002016655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/655/GCA_002016655.1_ASM201665v1	-	ABUH633
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.48413	66.4	-	FRHE01	129	6218	6013	12/9/16	3/21/17	Contig	DTU	SAMEA2357681	GCA_900144265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/265/GCA_900144265.1_86	-	-
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.03506	39.7	-	CMMI01	63	2222	2030	3/23/15	3/10/17	Contig	SC	SAMEA1029305	GCA_001167465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/465/GCA_001167465.1_7068_4_2	-	SMRU3122
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.59099	50.6	-	-	38	5957	5585	-	-	Scaffold	NTNU	SAMEA2593925	GCA_000943355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/355/GCA_000943355.2_FHI42	-	FHI42
Mycobacterium tuberculosis BTB10-142	1423518	PRJNA229299	229299	Terrabacteria group	Actinobacteria	4.43842	65.6	-	JKED01	5	4312	4101	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414934	GCA_000678775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/775/GCA_000678775.1_Myco_tube_BTB10-142_V1	-	BTB10-142
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72511	52	-	CJYB01	55	4878	4521	3/21/15	2/27/17	Contig	SC	SAMEA2059362	GCA_001171165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/165/GCA_001171165.1_9953_5_55	-	A390
Staphylococcus aureus M0451	1388301	PRJNA216471	216471	Terrabacteria group	Firmicutes	2.93574	32.8	-	JCGA01	48	3122	2940	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325425	GCA_000556205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/205/GCA_000556205.1_Stap_aure_M0451_V1	-	M0451
Staphylococcus aureus M0452	1388302	PRJNA216472	216472	Terrabacteria group	Firmicutes	2.93695	33	-	JCGB01	78	3134	2939	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325426	GCA_000556225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/225/GCA_000556225.1_Stap_aure_M0452_V1	-	M0452
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7225	52	-	CIVI01	53	4885	4523	3/21/15	2/27/17	Contig	SC	SAMEA2066527	GCA_001172385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/385/GCA_001172385.1_10209_5_35	-	UI2000
Mycobacterium tuberculosis BTB10-257	1423520	PRJNA229301	229301	Terrabacteria group	Actinobacteria	4.39547	65.6	-	JKEB01	9	4288	4108	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414936	GCA_000678795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/795/GCA_000678795.1_Myco_tube_BTB10-257_V1	-	BTB10-257
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.5118	50.6	-	-	38	5823	5414	-	-	Scaffold	NTNU	SAMEA2593951	GCA_000944015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/015/GCA_000944015.1_FHI71	-	FHI71
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.0121	39.7	-	CLQZ01	33	2205	1974	3/21/15	3/11/17	Contig	SC	SAMEA1028819	GCA_001167625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/625/GCA_001167625.1_6972_2_12	-	SMRU2556
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.43258	66.3	-	FRHF01	137	6165	5935	12/9/16	3/21/17	Contig	DTU	SAMEA2357678	GCA_900144275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/275/GCA_900144275.1_83	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.87551	38.9	-	MSNL01	113	3743	3598	3/3/17	3/6/17	Contig	JCVI	SAMN06117777	GCA_002016735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/735/GCA_002016735.1_ASM201673v1	-	ABUH648
Klebsiella pneumoniae	573	PRJNA360296	360296	Proteobacteria	Gammaproteobacteria	5.76881	56.8	-	MSYY01	222	5849	5567	6/9/17	6/12/17	Contig	UR12SP37-EA7361	SAMN06208380	GCA_002189335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/335/GCA_002189335.1_ASM218933v1	-	C7-E3-14
Klebsiella pneumoniae	573	PRJNA360371	360371	Proteobacteria	Gammaproteobacteria	5.48536	57.3	-	MSZF01	163	5567	5326	6/9/17	6/12/17	Contig	UR12SP37-EA7361	SAMN06209421	GCA_002189415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/415/GCA_002189415.1_ASM218941v1	-	C14-E10-16
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.01442	38.9	-	MSNQ01	107	3897	3742	3/3/17	3/6/17	Contig	JCVI	SAMN06117782	GCA_002016745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/745/GCA_002016745.1_ASM201674v1	-	ABUH669
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.45739	66.4	-	FRHO01	137	6192	5972	12/9/16	3/21/17	Contig	DTU	SAMEA2357679	GCA_900144285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/285/GCA_900144285.1_84	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.03295	39.7	-	CNUX02	158	2183	2000	3/23/15	3/11/17	Contig	SC	SAMEA1032696	GCA_001167645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/645/GCA_001167645.2_6999_7_14	-	379678
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	4.93553	50.8	-	-	24	5177	4798	-	-	Scaffold	NTNU	SAMEA2593912	GCA_000945615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/615/GCA_000945615.2_FHI28	-	FHI28
Mycobacterium tuberculosis BTB10-277	1423522	PRJNA229303	229303	Terrabacteria group	Actinobacteria	4.44605	65.6	-	JKDZ01	4	4308	4096	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414938	GCA_000678815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/815/GCA_000678815.1_Myco_tube_BTB10-277_V1	-	BTB10-277
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73706	52	-	CJJF01	46	4911	4555	3/21/15	2/27/17	Contig	SC	SAMEA1930159	GCA_001172705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/705/GCA_001172705.1_10592_2_39	-	E99-8013
Staphylococcus aureus M0453	1388303	PRJNA216473	216473	Terrabacteria group	Firmicutes	2.88709	32.8	-	JCGC01	69	3051	2927	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325427	GCA_000556245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/245/GCA_000556245.1_Stap_aure_M0453_V1	-	M0453
Staphylococcus aureus M0454	1388304	PRJNA216474	216474	Terrabacteria group	Firmicutes	2.89055	32.7	-	JCGD01	78	3079	2939	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325428	GCA_000556265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/265/GCA_000556265.1_Stap_aure_M0454_V1	-	M0454
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74127	52.1	-	CJMT01	48	4895	4534	3/21/15	2/27/17	Contig	SC	SAMEA2155921	GCA_001173505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/505/GCA_001173505.1_10607_2_35	-	BKQ4JU
Mycobacterium tuberculosis BTB10-295	1423523	PRJNA229304	229304	Terrabacteria group	Actinobacteria	4.41847	65.6	-	JKDY01	3	4283	4126	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414939	GCA_000678835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/835/GCA_000678835.1_Myco_tube_BTB10-295_V1	-	BTB10-295
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.439	50.5	-	-	48	5899	5383	-	-	Scaffold	NTNU	SAMEA2593964	GCA_000945955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/955/GCA_000945955.1_FHI85	-	FHI85
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.13747	39.6	-	CNWO02	172	2360	2139	3/23/15	3/11/17	Contig	SC	SAMEA1032510	GCA_001167665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/665/GCA_001167665.2_7001_1_9	-	R34-3086
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.41365	66.4	-	FRHH01	129	6144	5933	12/9/16	3/21/17	Contig	DTU	SAMEA2357682	GCA_900144295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/295/GCA_900144295.1_87	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.93663	39	-	MSNN01	146	3864	3669	3/3/17	3/6/17	Contig	JCVI	SAMN06117779	GCA_002016775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/775/GCA_002016775.1_ASM201677v1	-	ABUH654
Klebsiella pneumoniae	573	PRJNA377546	377546	Proteobacteria	Gammaproteobacteria	5.27812	57.8	-	NBSC01	779	5385	5037	6/14/17	6/19/17	Contig	University of Sao Paulo	SAMN06461950	GCA_002192975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/975/GCA_002192975.1_ASM219297v1	-	1721
Klebsiella pneumoniae	573	PRJNA382335	382335	Proteobacteria	Gammaproteobacteria	5.85717	56.5	-	NIZI01	205	5965	5618	6/22/17	6/24/17	Contig	"Austrian Agency for Health and Food Safety, Vienna, Austria"	SAMN06704522	GCA_002205015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/015/GCA_002205015.1_ASM220501v1	-	852K
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.97357	38.9	-	MSNJ01	119	3813	3635	3/3/17	3/6/17	Contig	JCVI	SAMN06117775	GCA_002016785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/785/GCA_002016785.1_ASM201678v1	-	ABUH642
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.48501	66.4	-	FRHK01	113	6208	6015	12/9/16	3/21/17	Contig	DTU	SAMEA2357685	GCA_900144305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/305/GCA_900144305.1_90	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.99741	39.7	-	CNZO02	220	2116	1949	3/23/15	3/11/17	Contig	SC	SAMEA1463042	GCA_001167685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/685/GCA_001167685.2_7553_5_74	-	PT8035
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.56205	50.4	-	-	65	6095	5577	-	-	Scaffold	NTNU	SAMEA2593975	GCA_000946275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/275/GCA_000946275.1_FHI97	-	FHI97
Mycobacterium tuberculosis BTB10-357	1423526	PRJNA229307	229307	Terrabacteria group	Actinobacteria	4.40312	65.6	-	JKDV01	5	4292	4101	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414942	GCA_000678855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/855/GCA_000678855.1_Myco_tube_BTB10-357_V1	-	BTB10-357
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.8041	52.1	-	CJYV01	40	4985	4620	3/21/15	2/27/17	Contig	SC	SAMEA2057372	GCA_001173685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/685/GCA_001173685.1_9953_5_83	-	LNT366
Staphylococcus aureus M0457	1388305	PRJNA216475	216475	Terrabacteria group	Firmicutes	2.89953	32.7	-	JCGE01	85	3084	2946	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325429	GCA_000556285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/285/GCA_000556285.1_Stap_aure_M0457_V1	-	M0457
Staphylococcus aureus M0458	1388306	PRJNA216476	216476	Terrabacteria group	Firmicutes	2.82669	32.9	-	JCGF01	10	2931	2766	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325430	GCA_000556305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/305/GCA_000556305.1_Stap_aure_M0458_V1	-	M0458
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93191	51.8	-	CJNK01	62	5121	4739	3/21/15	2/27/17	Contig	SC	SAMEA2153325	GCA_001173745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/745/GCA_001173745.1_10608_2_48	-	2010-019292
Mycobacterium tuberculosis BTB10-367	1423527	PRJNA229308	229308	Terrabacteria group	Actinobacteria	4.41263	65.6	-	JKDU01	4	4292	4124	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414943	GCA_000678875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/875/GCA_000678875.1_Myco_tube_BTB10-367_V1	-	BTB10-367
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.22811	50.6	-	-	34	5583	5197	-	-	Scaffold	NTNU	SAMEA2593917	GCA_000946475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/475/GCA_000946475.1_FHI34	-	FHI34
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.1625	39.5	-	CLNE01	61	2407	2164	3/21/15	3/11/17	Contig	SC	SAMEA1028649	GCA_001167725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/725/GCA_001167725.1_6938_8_2	-	SMRU2714
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.48874	66.4	-	FRHM01	91	6193	6013	12/9/16	3/21/17	Contig	DTU	SAMEA2357683	GCA_900144315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/315/GCA_900144315.1_88	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.84061	38.9	-	MSNR01	100	3698	3558	3/3/17	3/6/17	Contig	JCVI	SAMN06117783	GCA_002016815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/815/GCA_002016815.1_ASM201681v1	-	ABUH672
Klebsiella pneumoniae	573	PRJNA382335	382335	Proteobacteria	Gammaproteobacteria	5.86796	56.5	-	NIZK01	347	5983	5604	6/22/17	6/24/17	Contig	"Austrian Agency for Health and Food Safety, Vienna, Austria"	SAMN06704523	GCA_002205025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/025/GCA_002205025.1_ASM220502v1	-	852
Klebsiella pneumoniae	573	PRJNA382335	382335	Proteobacteria	Gammaproteobacteria	6.05044	56.3	-	NIZL01	500	6366	5861	6/22/17	6/24/17	Contig	"Austrian Agency for Health and Food Safety, Vienna, Austria"	SAMN06704546	GCA_002205045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/045/GCA_002205045.1_ASM220504v1	-	1337LF
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.75966	38.8	-	MSNS01	67	3576	3418	3/3/17	3/6/17	Contig	JCVI	SAMN06117784	GCA_002016825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/825/GCA_002016825.1_ASM201682v1	-	ABUH675
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.49641	66.4	-	FRHI01	117	6214	6009	12/9/16	3/21/17	Contig	DTU	SAMEA2357684	GCA_900144325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/325/GCA_900144325.1_89	-	-
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.09514	39.5	-	CRRE01	66	2303	2088	3/22/15	3/11/17	Contig	SC	SAMEA1025097	GCA_001167825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/825/GCA_001167825.1_6805_1_13	-	SMRU1021
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.3247	50.4	-	-	51	-	-	-	-	Scaffold	NTNU	SAMEA2593943	GCA_000946755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/755/GCA_000946755.2_FHI63	-	FHI63
Mycobacterium tuberculosis BTB10-406	1423528	PRJNA229309	229309	Terrabacteria group	Actinobacteria	4.4111	65.5	-	JKDT01	5	4279	4111	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414944	GCA_000678895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/895/GCA_000678895.1_Myco_tube_BTB10-406_V1	-	BTB10-406
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93517	51.8	-	CJNR01	61	5144	4744	3/21/15	2/27/17	Contig	SC	SAMEA2148418	GCA_001173945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/945/GCA_001173945.1_10608_2_58	-	2002-213689
Staphylococcus aureus M0462	1388308	PRJNA216478	216478	Terrabacteria group	Firmicutes	2.86851	32.9	-	JCGG01	50	3031	2837	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325432	GCA_000556325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/325/GCA_000556325.1_Stap_aure_M0462_V1	-	M0462
Staphylococcus aureus M0463	1388309	PRJNA216479	216479	Terrabacteria group	Firmicutes	2.88354	32.8	-	JCGH01	62	3053	2878	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325433	GCA_000556345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/345/GCA_000556345.1_Stap_aure_M0463_V1	-	M0463
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.76111	51.9	-	CJIW01	47	4928	4570	3/21/15	2/27/17	Contig	SC	SAMEA1929455	GCA_001174285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/285/GCA_001174285.1_10592_2_24	-	10109
Mycobacterium tuberculosis BTB10-422	1423529	PRJNA229310	229310	Terrabacteria group	Actinobacteria	4.44427	65.5	-	JKDS01	6	4298	4104	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414945	GCA_000678915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/915/GCA_000678915.1_Myco_tube_BTB10-422_V1	-	BTB10-422
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.75066	50.6	-	-	78	6427	5552	-	-	Scaffold	NTNU	SAMEA2593983	GCA_000947315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/315/GCA_000947315.1_StOlav104	-	StOlav104
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.13039	39.6	-	CODK02	195	2310	2107	3/22/15	3/5/17	Contig	SC	SAMEA1463168	GCA_001167885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/885/GCA_001167885.2_7622_4_22	-	LE4059
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.52135	66.3	-	FRHN01	158	6280	6057	12/9/16	3/21/17	Contig	DTU	SAMEA2357686	GCA_900144335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/335/GCA_900144335.1_91	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.98074	38.8	-	MSNW01	56	3849	3698	3/3/17	3/6/17	Contig	JCVI	SAMN06117788	GCA_002016855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/855/GCA_002016855.1_ASM201685v1	-	ABUH693
Klebsiella pneumoniae	573	PRJNA382335	382335	Proteobacteria	Gammaproteobacteria	5.28143	57.4	-	NIZJ01	239	5350	5070	6/22/17	6/24/17	Contig	"Austrian Agency for Health and Food Safety, Vienna, Austria"	SAMN06704513	GCA_002205055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/055/GCA_002205055.1_ASM220505v1	-	872
Klebsiella pneumoniae	573	PRJNA350736	350736	Proteobacteria	Gammaproteobacteria	5.48319	57.3	-	MOMG01	813	5591	5099	6/23/17	6/26/17	Contig	Beijing Institute of Genomics	SAMN05945842	GCA_002205985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/985/GCA_002205985.1_ASM220598v1	-	302
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.10688	38.9	-	MSNV01	103	4013	3859	3/3/17	3/6/17	Contig	JCVI	SAMN06117787	GCA_002016865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/865/GCA_002016865.1_ASM201686v1	-	ABUH690
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.4334	66.4	-	FRHP01	154	6162	5959	12/9/16	3/21/17	Contig	DTU	SAMEA2357687	GCA_900144345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/345/GCA_900144345.1_92	-	-
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08027	39.7	-	CRPW01	61	2313	2088	3/22/15	3/10/17	Contig	SC	SAMEA1024921	GCA_001167965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/965/GCA_001167965.1_6775_2_1	-	SMRU841
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.4866	50.4	-	-	46	5953	5487	-	-	Scaffold	NTNU	SAMEA2593891	GCA_000951835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/951/835/GCA_000951835.2_FHI4	-	FHI4
Mycobacterium tuberculosis BTB10-426	1423530	PRJNA229311	229311	Terrabacteria group	Actinobacteria	4.39762	65.6	-	JKDR01	4	4268	4106	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414946	GCA_000678935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/935/GCA_000678935.1_Myco_tube_BTB10-426_V1	-	BTB10-426
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73117	52	-	CJOZ01	44	4894	4529	3/21/15	2/27/17	Contig	SC	SAMEA1572810	GCA_001174365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/365/GCA_001174365.1_8447_8_30	-	MDUST102
Staphylococcus aureus M0464	1388310	PRJNA216480	216480	Terrabacteria group	Firmicutes	2.90118	32.8	-	JCGI01	47	3044	2893	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325434	GCA_000556365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/365/GCA_000556365.1_Stap_aure_M0464_V1	-	M0464
Staphylococcus aureus M0465	1388311	PRJNA216481	216481	Terrabacteria group	Firmicutes	2.95258	32.7	-	JCGJ01	82	3152	2933	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325435	GCA_000556385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/385/GCA_000556385.1_Stap_aure_M0465_V1	-	M0465
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72232	52	-	CJLW01	41	4886	4515	3/21/15	2/27/17	Contig	SC	SAMEA2148486	GCA_001174625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/625/GCA_001174625.1_10607_1_66	-	2002-205957
Mycobacterium tuberculosis BTB10-472	1423531	PRJNA229312	229312	Terrabacteria group	Actinobacteria	4.39417	65.5	-	JKDQ01	16	4285	4091	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414947	GCA_000678955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/955/GCA_000678955.1_Myco_tube_BTB10-472_V1	-	BTB10-472
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.34648	50.4	-	-	37	5776	5305	-	-	Scaffold	NTNU	SAMEA2593900	GCA_000951855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/951/855/GCA_000951855.1_FHI14	-	FHI14
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.14764	39.6	-	CMMV01	58	2387	2145	3/23/15	3/10/17	Contig	SC	SAMEA1029355	GCA_001168065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/065/GCA_001168065.1_7092_6_11	-	SMRU3107
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.43738	66.4	-	FRHL01	111	6134	5954	12/9/16	3/21/17	Contig	DTU	SAMEA2357688	GCA_900144355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/355/GCA_900144355.1_93	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.06629	38.9	-	MSNY01	89	3963	3811	3/3/17	3/6/17	Contig	JCVI	SAMN06117737	GCA_002016915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/915/GCA_002016915.1_ASM201691v1	-	ABUH522
Klebsiella pneumoniae	573	PRJNA350737	350737	Proteobacteria	Gammaproteobacteria	5.37395	57.4	-	MOMH01	152	5373	5075	6/23/17	6/26/17	Contig	Beijing Institute of Genomics	SAMN05945843	GCA_002205995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/995/GCA_002205995.1_ASM220599v1	-	327
Klebsiella pneumoniae	573	PRJNA350741	350741	Proteobacteria	Gammaproteobacteria	5.56433	57.3	-	MOMI01	256	5541	5245	6/23/17	6/26/17	Contig	Beijing Institute of Genomics	SAMN05945851	GCA_002206015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/015/GCA_002206015.1_ASM220601v1	-	329
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.98602	39	-	MSOD01	137	3914	3710	3/3/17	3/6/17	Contig	JCVI	SAMN06117745	GCA_002016935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/935/GCA_002016935.1_ASM201693v1	-	ABUH546
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.97675	65.8	-	FRHQ01	289	6822	6505	12/9/16	3/21/17	Contig	DTU	SAMEA2357690	GCA_900144365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/365/GCA_900144365.1_95	-	-
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.00718	39.7	-	CLLU01	46	2224	2016	3/21/15	3/10/17	Contig	SC	SAMEA1028683	GCA_001168085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/085/GCA_001168085.1_6938_6_20	-	SMRU2684
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.33671	50.4	-	-	36	5648	5225	-	-	Scaffold	NTNU	SAMEA2593914	GCA_000951895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/951/895/GCA_000951895.1_FHI30	-	FHI30
Mycobacterium tuberculosis BTB10-487	1423532	PRJNA229313	229313	Terrabacteria group	Actinobacteria	4.40854	65.6	-	JKDP01	6	4280	4104	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414948	GCA_000678975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/975/GCA_000678975.1_Myco_tube_BTB10-487_V1	-	BTB10-487
Salmonella enterica subsp. enterica	59201	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.76328	52.2	-	JWSQ01	2	4837	4570	12/24/14	7/6/17	Contig	US Food and Drug Administration 	SAMN03255434	GCA_001188125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/125/GCA_001188125.1_ASM118812v1	-	SARA35
Staphylococcus aureus M0466	1388312	PRJNA216482	216482	Terrabacteria group	Firmicutes	2.80881	32.8	-	JCGK01	38	2937	2771	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325436	GCA_000556405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/405/GCA_000556405.1_Stap_aure_M0466_V1	-	M0466
Staphylococcus aureus M0469	1388313	PRJNA216483	216483	Terrabacteria group	Firmicutes	2.90106	32.7	-	JCGL01	92	3071	2928	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325437	GCA_000556425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/425/GCA_000556425.1_Stap_aure_M0469_V1	-	M0469
Salmonella enterica subsp. houtenae	59205	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.83965	51.7	-	JWSP01	7	4845	4373	12/24/14	7/6/17	Contig	US Food and Drug Administration 	SAMN03255435	GCA_001188155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/155/GCA_001188155.1_ASM118815v1	-	01-0133
Mycobacterium tuberculosis BTB11-001	1423533	PRJNA229314	229314	Terrabacteria group	Actinobacteria	4.42892	65.5	-	JKDO01	3	4300	4099	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414949	GCA_000678995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/678/995/GCA_000678995.1_Myco_tube_BTB11-001_V1	-	BTB11-001
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.55337	50.6	-	-	37	5886	5511	-	-	Scaffold	NTNU	SAMEA2593978	GCA_000951955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/951/955/GCA_000951955.1_FHI100	-	FHI100
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05487	39.6	-	COCC02	141	2217	2014	3/23/15	3/11/17	Contig	SC	SAMEA1463105	GCA_001168145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/145/GCA_001168145.2_7622_3_57	-	CH2060
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.22902	66.6	-	FRHR01	95	5904	5750	12/9/16	3/21/17	Contig	DTU	SAMEA2357689	GCA_900144375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/375/GCA_900144375.1_94	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.96136	39	-	MSOE01	139	3888	3688	3/3/17	3/6/17	Contig	JCVI	SAMN06117746	GCA_002016955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/955/GCA_002016955.1_ASM201695v1	-	ABUH549
Klebsiella pneumoniae	573	PRJNA384201	384201	Proteobacteria	Gammaproteobacteria	5.31754	57.5	-	NIRG01	62	5366	5108	6/27/17	6/29/17	Contig	Federal University of Uberlandia 	SAMN06830440	GCA_002209465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/465/GCA_002209465.1_ASM220946v1	-	KPC40
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA378804	378804	Proteobacteria	Gammaproteobacteria	5.69142	57.1	-	MZMX01	44	5671	5379	6/28/17	6/30/17	Contig	Public Health England	SAMN06562536	GCA_002210445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/210/445/GCA_002210445.1_ASM221044v1	-	KpvST23L_OXA-48
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.91314	38.8	-	MSOH01	101	3765	3592	3/3/17	3/6/17	Contig	JCVI	SAMN06117749	GCA_002016975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/975/GCA_002016975.1_ASM201697v1	-	ABUH561
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	7.12946	65.7	-	FRHS01	165	6933	6723	12/9/16	3/21/17	Contig	DTU	SAMEA2357691	GCA_900144385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/385/GCA_900144385.1_96	-	-
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.02833	39.7	-	CKVE01	51	2218	2032	3/21/15	3/4/17	Contig	SC	SAMEA1025934	GCA_001168165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/165/GCA_001168165.1_6823_3_24	-	SMRU1920
Escherichia coli O157:H7	83334	PRJNA280853	280853	Proteobacteria	Gammaproteobacteria	5.42755	50.3	-	LAYW01	325	5856	5377	4/23/15	2/23/17	Scaffold	Instituto Nacional de Tecnologia Agropecuaria	SAMN03470766	GCA_000978845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/978/845/GCA_000978845.1_ASM97884v1	26067964	Rafaela_II
Mycobacterium tuberculosis BTB11-027	1423534	PRJNA229315	229315	Terrabacteria group	Actinobacteria	4.40251	65.6	-	JKDN01	7	4283	4091	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414950	GCA_000679015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/015/GCA_000679015.1_Myco_tube_BTB11-027_V1	-	BTB11-027
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97559	52.1	-	CTAJ01	84	5159	4883	3/24/15	2/27/17	Contig	SC	SAMEA1521979	GCA_001215505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/505/GCA_001215505.1_8080_3_53	-	V73
Staphylococcus aureus M0471	1388314	PRJNA216484	216484	Terrabacteria group	Firmicutes	2.87094	32.8	-	JCGM01	49	3025	2857	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325438	GCA_000556445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/445/GCA_000556445.1_Stap_aure_M0471_V1	-	M0471
Staphylococcus aureus M0472	1388315	PRJNA216485	216485	Terrabacteria group	Firmicutes	2.88875	32.9	-	JCGN01	70	3090	2912	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325439	GCA_000556465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/465/GCA_000556465.1_Stap_aure_M0472_V1	-	M0472
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.94611	52.1	-	CTAC01	84	5115	4859	3/24/15	2/27/17	Contig	SC	SAMEA773582	GCA_001217045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/045/GCA_001217045.1_5275_3_5	-	V61
Mycobacterium tuberculosis BTB11-047	1423535	PRJNA229316	229316	Terrabacteria group	Actinobacteria	4.35023	65.6	-	JKDM01	4	4243	4074	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414951	GCA_000679035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/035/GCA_000679035.1_Myco_tube_BTB11-047_V1	-	BTB11-047
Escherichia coli	562	PRJNA262462	262462	Proteobacteria	Gammaproteobacteria	5.2439	50.1	-	LCWG01	647	5293	4894	5/28/15	2/23/17	Scaffold	"West China Hospital, Sichuan University"	SAMN03083281	GCA_001014795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/014/795/GCA_001014795.1_ASM101479v1	-	WCHEC13-8
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.99349	39.7	-	COCA02	155	2157	1965	3/23/15	3/5/17	Contig	SC	SAMEA1463138	GCA_001168205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/205/GCA_001168205.2_7622_3_56	-	CH2054
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.99345	65.8	-	FRHV01	184	6764	6514	12/9/16	3/21/17	Contig	DTU	SAMEA2357692	GCA_900144395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/395/GCA_900144395.1_97	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.99129	38.9	-	MSOI01	79	3841	3668	3/3/17	3/6/17	Contig	JCVI	SAMN06117750	GCA_002016985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/985/GCA_002016985.1_ASM201698v1	-	ABUH564
Klebsiella pneumoniae	573	PRJNA393721	393721	Proteobacteria	Gammaproteobacteria	5.48987	57.4	-	NMQL01	142	5619	5338	7/27/17	8/1/17	Contig	"Rempex Pharmaceuticals, a wholly owned subsidiary of the Medicines Company"	SAMN07340533	GCA_002234875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/234/875/GCA_002234875.1_ASM223487v1	-	JMI28838mut
Klebsiella pneumoniae	573	PRJNA393721	393721	Proteobacteria	Gammaproteobacteria	5.5006	57.4	-	NMQM01	144	5636	5339	7/27/17	8/1/17	Contig	"Rempex Pharmaceuticals, a wholly owned subsidiary of the Medicines Company"	SAMN07340532	GCA_002234895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/234/895/GCA_002234895.1_ASM223489v1	-	JMI28838
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.90686	38.9	-	MSOK01	95	3760	3587	3/3/17	3/6/17	Contig	JCVI	SAMN06117752	GCA_002016995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/995/GCA_002016995.1_ASM201699v1	-	ABUH570
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.98538	65.8	-	FRHY01	215	6763	6509	12/9/16	3/21/17	Contig	DTU	SAMEA2357693	GCA_900144405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/405/GCA_900144405.1_98	-	-
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.07775	39.7	-	CPPI01	62	2287	2077	3/22/15	3/4/17	Contig	SC	SAMEA682278	GCA_001168225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/225/GCA_001168225.1_5381_2_5	-	09B04807
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.98745	50.8	-	LETS01	11	5141	4742	6/19/15	2/23/17	Scaffold	Broad Institute	SAMN03280195	GCA_001030245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/245/GCA_001030245.1_Esch_coli_BWH49_V1	-	BWH49
Mycobacterium tuberculosis BTB11-112	1423536	PRJNA229317	229317	Terrabacteria group	Actinobacteria	4.40056	65.6	-	JKDL01	74	4320	4118	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414952	GCA_000679055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/055/GCA_000679055.1_Myco_tube_BTB11-112_V1	-	BTB11-112
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.96124	52.1	-	CTOK01	85	5127	4873	3/26/15	2/27/17	Contig	SC	SAMEA773655	GCA_001217645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/645/GCA_001217645.1_5275_3_10	-	V67
Staphylococcus aureus M0475	1388316	PRJNA216486	216486	Terrabacteria group	Firmicutes	2.89788	32.9	-	JCGO01	51	3047	2865	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325440	GCA_000556485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/485/GCA_000556485.1_Stap_aure_M0475_V1	-	M0475
Staphylococcus aureus M0476	1388317	PRJNA216487	216487	Terrabacteria group	Firmicutes	2.87192	32.9	-	JCGP01	51	3032	2858	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325441	GCA_000556505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/505/GCA_000556505.1_Stap_aure_M0476_V1	-	M0476
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.96885	52.1	-	CTLF01	93	5157	4881	3/26/15	2/27/17	Contig	SC	SAMEA1484070	GCA_001217945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/945/GCA_001217945.1_8036_3_37	-	H145
Mycobacterium tuberculosis BTB11-133	1423537	PRJNA229318	229318	Terrabacteria group	Actinobacteria	4.38647	65.5	-	JKDK01	6	4259	4090	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414953	GCA_000679075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/075/GCA_000679075.1_Myco_tube_BTB11-133_V1	-	BTB11-133
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.09319	50.6	-	LETW01	8	5253	4910	6/19/15	2/23/17	Scaffold	Broad Institute	SAMN03280200	GCA_001030285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/285/GCA_001030285.1_Esch_coli_BWH59_V1	-	BWH59
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09253	39.5	-	CMOV01	72	2298	2081	3/23/15	3/4/17	Contig	SC	SAMEA2061469	GCA_001168265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/265/GCA_001168265.1_9803_7_4	-	35F
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.98893	65.8	-	FRHZ01	200	6772	6515	12/9/16	3/20/17	Contig	DTU	SAMEA2357267	GCA_900144415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/415/GCA_900144415.1_101	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.88579	39.1	-	MSOM01	142	3774	3594	3/3/17	3/6/17	Contig	JCVI	SAMN06117754	GCA_002017035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/035/GCA_002017035.1_ASM201703v1	-	ABUH579
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.72849	57.1	-	NGWJ01	133	5869	5626	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917661	GCA_002235045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/045/GCA_002235045.1_ASM223504v1	-	68
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.82462	57.1	-	NGWX01	175	5973	5727	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917647	GCA_002235235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/235/GCA_002235235.1_ASM223523v1	-	54
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.00536	38.9	-	MSON01	75	3886	3750	3/3/17	3/6/17	Contig	JCVI	SAMN06117755	GCA_002017055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/055/GCA_002017055.1_ASM201705v1	-	ABUH582
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.99258	65.8	-	FRHT01	190	6775	6523	12/9/16	3/21/17	Contig	DTU	SAMEA2357694	GCA_900144425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/425/GCA_900144425.1_99	-	-
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10494	39.7	-	CLQN01	63	2338	2136	3/21/15	3/4/17	Contig	SC	SAMEA1029008	GCA_001168385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/385/GCA_001168385.1_6949_4_6	-	SMRU2478
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.28364	50.8	-	LETX01	12	5473	5111	6/19/15	2/23/17	Scaffold	Broad Institute	SAMN03280201	GCA_001030305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/305/GCA_001030305.1_Esch_coli_BWH60_V1	-	BWH60
Mycobacterium tuberculosis BTB11-139	1423538	PRJNA229319	229319	Terrabacteria group	Actinobacteria	4.40508	65.5	-	JKDJ01	5	4288	4106	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414954	GCA_000679095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/095/GCA_000679095.1_Myco_tube_BTB11-139_V1	-	BTB11-139
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97536	52.1	-	CTGQ01	87	5159	4882	3/26/15	2/27/17	Contig	SC	SAMEA1522013	GCA_001218665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/665/GCA_001218665.1_8080_3_69	-	V89
Staphylococcus aureus M0481	1388319	PRJNA216489	216489	Terrabacteria group	Firmicutes	2.90582	32.9	-	JCGR01	60	3070	2876	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325443	GCA_000556545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/545/GCA_000556545.1_Stap_aure_M0481_V1	-	M0481
Staphylococcus aureus M0482	1388320	PRJNA216490	216490	Terrabacteria group	Firmicutes	2.81396	32.8	-	JCGS01	27	2942	2769	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325444	GCA_000556565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/565/GCA_000556565.1_Stap_aure_M0482_V1	-	M0482
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.9636	52.1	-	CTQE01	88	5128	4874	3/26/15	2/27/17	Contig	SC	SAMEA773573	GCA_001219265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/265/GCA_001219265.1_5275_2_5	-	V32
Mycobacterium tuberculosis BTB11-160	1423539	PRJNA229320	229320	Terrabacteria group	Actinobacteria	4.41044	65.6	-	JKDI01	7	4273	4075	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414955	GCA_000679115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/115/GCA_000679115.1_Myco_tube_BTB11-160_V1	-	BTB11-160
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.28576	50.8	-	LETY01	17	5479	5116	6/19/15	2/23/17	Scaffold	Broad Institute	SAMN03280202	GCA_001030325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/325/GCA_001030325.1_Esch_coli_BWH61_V1	-	BWH61
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.03736	39.6	-	CPQP01	56	2224	1988	3/23/15	3/4/17	Contig	SC	SAMEA1020353	GCA_001168465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/465/GCA_001168465.1_6259_4_3	-	SN41911
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.98475	65.8	-	FRHW01	239	6805	6523	12/9/16	3/20/17	Contig	DTU	SAMEA2357266	GCA_900144435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/435/GCA_900144435.1_100	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.83655	38.9	-	MSOP01	116	3715	3566	3/3/17	3/6/17	Contig	JCVI	SAMN06117757	GCA_002017065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/065/GCA_002017065.1_ASM201706v1	-	ABUH588
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.79056	57.1	-	NGWY01	157	5928	5691	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917646	GCA_002235245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/245/GCA_002235245.1_ASM223524v1	-	53
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.66951	57.2	-	NGXC01	166	5756	5529	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917642	GCA_002235325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/325/GCA_002235325.1_ASM223532v1	-	49
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.83085	38.9	-	MSOO01	107	3709	3562	3/3/17	3/6/17	Contig	JCVI	SAMN06117756	GCA_002017095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/095/GCA_002017095.1_ASM201709v1	-	ABUH585
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.99721	65.8	-	FRHU01	188	6774	6521	12/9/16	3/20/17	Contig	DTU	SAMEA2357268	GCA_900144445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/445/GCA_900144445.1_102	-	-
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.10592	39.7	-	CPQO01	66	2296	2091	3/23/15	3/4/17	Contig	SC	SAMEA682318	GCA_001168485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/485/GCA_001168485.1_5468_2_6	-	C03_00126
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.22497	50.7	-	LETZ01	5	5493	5142	6/19/15	2/25/17	Scaffold	Broad Institute	SAMN03280203	GCA_001030345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/345/GCA_001030345.1_Esch_coli_MGH107_V1	-	MGH107
Mycobacterium tuberculosis BTB11-192	1423540	PRJNA229321	229321	Terrabacteria group	Actinobacteria	4.41687	65.6	-	JKDH01	5	4299	4122	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414956	GCA_000679135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/135/GCA_000679135.1_Myco_tube_BTB11-192_V1	-	BTB11-192
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.89201	52.2	-	CTOG01	42	5024	4789	3/26/15	2/27/17	Contig	SC	SAMEA773646	GCA_001219925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/925/GCA_001219925.1_5275_5_1	-	V01
Staphylococcus aureus M0483	1388321	PRJNA216491	216491	Terrabacteria group	Firmicutes	2.80518	32.8	-	JCGT01	38	2964	2791	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325445	GCA_000556585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/585/GCA_000556585.1_Stap_aure_M0483_V1	-	M0483
Staphylococcus aureus M0484	1388322	PRJNA216492	216492	Terrabacteria group	Firmicutes	2.86949	32.8	-	JCGU01	39	3016	2844	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325446	GCA_000556605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/605/GCA_000556605.1_Stap_aure_M0484_V1	-	M0484
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.96853	52.1	-	CTLN01	77	5153	4870	3/26/15	2/27/17	Contig	SC	SAMEA1521956	GCA_001220205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/205/GCA_001220205.1_8080_3_77	-	V97
Mycobacterium tuberculosis BTB11-195	1423541	PRJNA229322	229322	Terrabacteria group	Actinobacteria	4.40219	65.6	-	JKDG01	4	4272	4102	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414957	GCA_000679155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/155/GCA_000679155.1_Myco_tube_BTB11-195_V1	-	BTB11-195
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.90871	50.8	-	LETT01	12	5087	4680	6/19/15	2/23/17	Scaffold	Broad Institute	SAMN03280196	GCA_001030355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/355/GCA_001030355.1_Esch_coli_BWH50_V1	-	BWH50
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.03858	39.7	-	CPSF01	99	2234	2015	3/22/15	3/4/17	Contig	SC	SAMEA682572	GCA_001168545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/545/GCA_001168545.1_5477_6_5	-	M01_9962
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.9898	65.8	-	FRHX01	181	6761	6518	12/9/16	3/20/17	Contig	DTU	SAMEA2357269	GCA_900144455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/455/GCA_900144455.1_103	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.97953	39	-	MSOS01	142	3913	3713	3/3/17	3/6/17	Contig	JCVI	SAMN06117760	GCA_002017105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/105/GCA_002017105.1_ASM201710v1	-	ABUH597
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.76345	57.1	-	NGXG01	189	5893	5634	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917638	GCA_002235435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/435/GCA_002235435.1_ASM223543v1	-	45
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.87312	57.1	-	NGYL01	229	6036	5789	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917607	GCA_002235495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/495/GCA_002235495.1_ASM223549v1	-	14
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.88652	38.9	-	MSOQ01	112	3755	3607	3/3/17	3/6/17	Contig	JCVI	SAMN06117758	GCA_002017115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/115/GCA_002017115.1_ASM201711v1	-	ABUH591
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.94272	65.8	-	FRIB01	189	6742	6463	12/9/16	3/20/17	Contig	DTU	SAMEA2357270	GCA_900144465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/465/GCA_900144465.1_104	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.9986	39.7	-	COCG02	169	2125	1947	3/22/15	3/11/17	Contig	SC	SAMEA1463201	GCA_001168665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/665/GCA_001168665.2_7622_3_65	-	CH2083
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.38143	50.7	-	LETU01	8	5656	5279	6/19/15	2/23/17	Scaffold	Broad Institute	SAMN03280198	GCA_001030365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/365/GCA_001030365.1_Esch_coli_BWH55_V1	-	BWH55
Mycobacterium tuberculosis BTB11-207	1423542	PRJNA229323	229323	Terrabacteria group	Actinobacteria	4.44802	65.5	-	JKDF01	7	4316	4107	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414958	GCA_000679175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/175/GCA_000679175.1_Myco_tube_BTB11-207_V1	-	BTB11-207
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.96633	52.1	-	CTPG01	79	5158	4874	3/26/15	2/27/17	Contig	SC	SAMEA1484121	GCA_001220425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/425/GCA_001220425.1_8036_3_83	-	FRANCEb
Staphylococcus aureus M0486	1388323	PRJNA216493	216493	Terrabacteria group	Firmicutes	2.7093	32.8	-	JCGV01	50	2831	2668	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325447	GCA_000556625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/625/GCA_000556625.1_Stap_aure_M0486_V1	-	M0486
Staphylococcus aureus M0487	1388324	PRJNA216494	216494	Terrabacteria group	Firmicutes	2.93917	32.8	-	JCGW01	62	3107	2906	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325448	GCA_000556645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/645/GCA_000556645.1_Stap_aure_M0487_V1	-	M0487
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.87378	52.1	-	CTMZ01	98	5027	4763	3/26/15	2/27/17	Contig	SC	SAMEA1484027	GCA_001220945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/945/GCA_001220945.1_8036_3_51	-	V119
Mycobacterium tuberculosis BTB11-210	1423543	PRJNA229324	229324	Terrabacteria group	Actinobacteria	4.44704	65.5	-	JKDE01	4	4278	4092	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414959	GCA_000679195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/195/GCA_000679195.1_Myco_tube_BTB11-210_V1	-	BTB11-210
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.80591	50.8	-	LEUA01	2	4938	4546	6/19/15	2/23/17	Scaffold	Broad Institute	SAMN03280204	GCA_001030405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/405/GCA_001030405.1_Esch_coli_MGH108_V1	-	MGH108
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.04332	39.7	-	CLET01	55	2226	2025	3/21/15	3/4/17	Contig	SC	SAMEA1025843	GCA_001168705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/705/GCA_001168705.1_6899_6_6	-	SMRU2070
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.95216	65.8	-	FRIC01	237	6776	6487	12/9/16	3/20/17	Contig	DTU	SAMEA2357275	GCA_900144475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/475/GCA_900144475.1_109	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.99417	38.9	-	MSOR01	75	3875	3739	3/3/17	3/6/17	Contig	JCVI	SAMN06117759	GCA_002017125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/125/GCA_002017125.1_ASM201712v1	-	ABUH594
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.79625	57.1	-	NGYH01	210	5971	5696	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917611	GCA_002235515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/515/GCA_002235515.1_ASM223551v1	-	18
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.58102	57.2	-	NGXP01	108	5687	5467	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917629	GCA_002235535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/535/GCA_002235535.1_ASM223553v1	-	36
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.81232	38.8	-	MSOV01	94	3684	3511	3/3/17	3/6/17	Contig	JCVI	SAMN06117765	GCA_002017175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/175/GCA_002017175.1_ASM201717v1	-	ABUH612
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.90356	65.8	-	FRID01	164	6669	6426	12/9/16	3/20/17	Contig	DTU	SAMEA2357272	GCA_900144485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/485/GCA_900144485.1_106	-	-
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08909	39.6	-	CKVB01	48	2300	2066	3/21/15	3/11/17	Contig	SC	SAMEA1026189	GCA_001168845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/845/GCA_001168845.1_6823_3_5	-	SMRU1901
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.13824	50.8	-	LEUB01	168	5375	4915	6/19/15	2/23/17	Scaffold	Broad Institute	SAMN03280205	GCA_001030425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/425/GCA_001030425.1_Esch_coli_MGH121_V1	-	MGH121
Mycobacterium tuberculosis BTB11-214	1423544	PRJNA229325	229325	Terrabacteria group	Actinobacteria	4.35539	65.6	-	JKDD01	60	4280	4096	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414960	GCA_000679215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/215/GCA_000679215.1_Myco_tube_BTB11-214_V1	-	BTB11-214
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.94613	52.1	-	CTHC01	87	5106	4860	3/26/15	2/27/17	Contig	SC	SAMEA773528	GCA_001221025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/025/GCA_001221025.1_5275_8_10	-	H68
Staphylococcus aureus M0490	1388326	PRJNA216496	216496	Terrabacteria group	Firmicutes	2.85155	32.8	-	JCGX01	39	3005	2836	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325450	GCA_000556665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/665/GCA_000556665.1_Stap_aure_M0490_V1	-	M0490
Staphylococcus aureus M0491	1388327	PRJNA216497	216497	Terrabacteria group	Firmicutes	2.86189	32.8	-	JCGY01	40	3016	2856	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325451	GCA_000556685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/685/GCA_000556685.1_Stap_aure_M0491_V1	-	M0491
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.96574	52.1	-	CTPA01	111	5154	4868	3/26/15	2/27/17	Contig	SC	SAMEA1484099	GCA_001221105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/105/GCA_001221105.1_8036_3_53	-	V121
Mycobacterium tuberculosis BTB11-236	1423545	PRJNA229326	229326	Terrabacteria group	Actinobacteria	4.41132	65.6	-	JKDC01	6	4276	4103	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414961	GCA_000679235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/235/GCA_000679235.1_Myco_tube_BTB11-236_V1	-	BTB11-236
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.51031	50.4	-	LEUC01	15	5770	5339	6/19/15	2/24/17	Scaffold	Broad Institute	SAMN03280206	GCA_001030435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/435/GCA_001030435.1_Esch_coli_MGH122_V1	-	MGH122
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06276	39.5	-	CNXI02	162	2215	2009	3/23/15	3/5/17	Contig	SC	SAMEA1032692	GCA_001168965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/965/GCA_001168965.2_7001_3_16	-	R34-3153
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.99218	65.8	-	FRIE01	223	6791	6511	12/9/16	3/20/17	Contig	DTU	SAMEA2357271	GCA_900144495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/495/GCA_900144495.1_105	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.02766	38.9	-	MSOX01	80	3919	3773	3/3/17	3/6/17	Contig	JCVI	SAMN06117767	GCA_002017185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/185/GCA_002017185.1_ASM201718v1	-	ABUH618
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	6.03536	57.1	-	NGYU01	167	6185	5943	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917598	GCA_002235555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/555/GCA_002235555.1_ASM223555v1	-	5
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.87925	57	-	NGXQ01	159	6048	5796	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917628	GCA_002235575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/575/GCA_002235575.1_ASM223557v1	-	35
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.94057	39	-	MSPC01	121	3872	3677	3/3/17	3/6/17	Contig	JCVI	SAMN06117722	GCA_002017195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/195/GCA_002017195.1_ASM201719v1	-	ABUH462
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.94614	65.8	-	FRIA01	200	6753	6479	12/9/16	3/20/17	Contig	DTU	SAMEA2357273	GCA_900144505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/505/GCA_900144505.1_107	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08079	39.5	-	CNPZ02	168	2239	2021	3/23/15	3/15/17	Contig	SC	SAMEA1032451	GCA_001169025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/025/GCA_001169025.2_6952_4_6	-	436915
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.36275	50.4	-	LEUD01	18	5575	5182	6/19/15	2/23/17	Scaffold	Broad Institute	SAMN03280207	GCA_001030445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/445/GCA_001030445.1_Esch_coli_BIDMC97_V1	-	BIDMC97
Mycobacterium tuberculosis BTB11-250	1423546	PRJNA229327	229327	Terrabacteria group	Actinobacteria	4.40634	65.6	-	JKDB01	5	4281	4111	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414962	GCA_000679255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/255/GCA_000679255.1_Myco_tube_BTB11-250_V1	-	BTB11-250
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97206	52.1	-	CTLV01	79	5159	4868	3/26/15	2/27/17	Contig	SC	SAMEA1707596	GCA_001221665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/665/GCA_001221665.1_9065_1_2	-	EWV7
Staphylococcus aureus M0496	1388329	PRJNA216499	216499	Terrabacteria group	Firmicutes	2.79889	32.8	-	JCGZ01	33	2907	2765	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325453	GCA_000556705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/705/GCA_000556705.1_Stap_aure_M0496_V1	-	M0496
Staphylococcus aureus M0501	1388331	PRJNA216501	216501	Terrabacteria group	Firmicutes	2.87145	32.9	-	JCHA01	55	3025	2830	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325455	GCA_000556725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/725/GCA_000556725.1_Stap_aure_M0501_V1	-	M0501
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97324	52.1	-	CTQR01	83	5172	4889	3/26/15	2/27/17	Contig	SC	SAMEA1522007	GCA_001222085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/085/GCA_001222085.1_8080_3_3	-	H98
Mycobacterium tuberculosis BTB11-289	1423547	PRJNA229328	229328	Terrabacteria group	Actinobacteria	4.38701	65.6	-	JKDA01	68	4316	4114	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414963	GCA_000679275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/275/GCA_000679275.1_Myco_tube_BTB11-289_V1	-	BTB11-289
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.97908	50.9	-	LEUE01	5	5130	4736	6/19/15	2/24/17	Scaffold	Broad Institute	SAMN03280208	GCA_001030485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/485/GCA_001030485.1_Esch_coli_BIDMC98_V1	-	BIDMC98
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.1974	39.5	-	CMQV01	49	2454	2201	3/23/15	3/11/17	Contig	SC	SAMEA2061740	GCA_001169065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/065/GCA_001169065.1_9803_8_22	-	23F
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.89101	65.8	-	FRIF01	263	6724	6411	12/9/16	3/20/17	Contig	DTU	SAMEA2357274	GCA_900144515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/515/GCA_900144515.1_108	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.76617	39	-	MSPA01	103	3615	3474	3/3/17	3/6/17	Contig	JCVI	SAMN06117771	GCA_002017205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/205/GCA_002017205.1_ASM201720v1	-	ABUH630
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.9173	57	-	NGXW01	167	6087	5842	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917622	GCA_002235595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/595/GCA_002235595.1_ASM223559v1	-	29
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.66407	57	-	NGYA01	136	5765	5526	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917618	GCA_002235655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/655/GCA_002235655.1_ASM223565v1	-	25
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.01039	39	-	MSPF01	118	3938	3746	3/3/17	3/6/17	Contig	JCVI	SAMN06117725	GCA_002017255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/255/GCA_002017255.1_ASM201725v1	-	ABUH474
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.28514	66.5	-	FRIG01	158	5997	5791	12/9/16	3/20/17	Contig	DTU	SAMEA2357276	GCA_900144525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/525/GCA_900144525.1_110	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.0818	39.6	-	CRKV01	65	2311	2068	3/23/15	3/11/17	Contig	SC	SAMEA1025364	GCA_001169145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/145/GCA_001169145.1_6753_4_20	-	SMRU1556
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.17577	50.7	-	LEUF01	10	5423	5050	6/19/15	2/23/17	Scaffold	Broad Institute	SAMN03280209	GCA_001030505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/505/GCA_001030505.1_Esch_coli_BIDMC101_V1	-	BIDMC101
Mycobacterium tuberculosis BTB11-299	1423548	PRJNA229329	229329	Terrabacteria group	Actinobacteria	4.40724	65.6	-	JKCZ01	4	4293	4089	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414964	GCA_000679295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/295/GCA_000679295.1_Myco_tube_BTB11-299_V1	-	BTB11-299
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	5.00188	52	-	CTHA01	84	5186	4911	3/26/15	2/28/17	Contig	SC	SAMEA1484024	GCA_001223345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/345/GCA_001223345.1_8036_3_73	-	ITALY
Staphylococcus aureus M0503	1388333	PRJNA216503	216503	Terrabacteria group	Firmicutes	2.89652	32.8	-	JCHB01	67	3076	2893	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325457	GCA_000556745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/745/GCA_000556745.1_Stap_aure_M0503_V1	-	M0503
Staphylococcus aureus M0505	1388334	PRJNA216504	216504	Terrabacteria group	Firmicutes	2.92032	32.8	-	JCHC01	66	3078	2929	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325458	GCA_000556765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/765/GCA_000556765.1_Stap_aure_M0505_V1	-	M0505
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.977	52.1	-	CTHV01	82	5164	4884	3/26/15	2/27/17	Contig	SC	SAMEA1521989	GCA_001223525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/525/GCA_001223525.1_8080_3_81	-	V101
Mycobacterium tuberculosis BTB11-300	1423549	PRJNA229330	229330	Terrabacteria group	Actinobacteria	4.41944	65.5	-	JKCY01	3	4291	4094	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414965	GCA_000679315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/315/GCA_000679315.1_Myco_tube_BTB11-300_V1	-	BTB11-300
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.17254	50.9	-	LEUG01	10	5348	4952	6/19/15	2/25/17	Scaffold	Broad Institute	SAMN03280210	GCA_001030515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/515/GCA_001030515.1_Esch_coli_BIDMC102_V1	-	BIDMC102
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.10897	39.7	-	CNZM02	203	2305	2109	3/23/15	3/5/17	Contig	SC	SAMEA1463058	GCA_001169225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/225/GCA_001169225.2_7553_5_73	-	PT8029
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.2839	66.5	-	FRII01	133	5973	5787	12/9/16	3/20/17	Contig	DTU	SAMEA2357278	GCA_900144535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/535/GCA_900144535.1_112	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.93634	38.9	-	MSPE01	134	3856	3662	3/3/17	3/6/17	Contig	JCVI	SAMN06117724	GCA_002017265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/265/GCA_002017265.1_ASM201726v1	-	ABUH471
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	6.02959	56.9	-	NGYC01	226	6200	5923	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917616	GCA_002235675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/675/GCA_002235675.1_ASM223567v1	-	23
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.83639	57.1	-	NGYN01	226	6007	5757	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917605	GCA_002235695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/695/GCA_002235695.1_ASM223569v1	-	12
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.00495	39	-	MSPH01	122	3943	3744	3/3/17	3/6/17	Contig	JCVI	SAMN06117727	GCA_002017285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/285/GCA_002017285.1_ASM201728v1	-	ABUH480
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.28119	66.5	-	FRIK01	156	5997	5785	12/9/16	3/20/17	Contig	DTU	SAMEA2357277	GCA_900144545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/545/GCA_900144545.1_111	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09837	39.5	-	CRUA01	54	2302	2087	3/23/15	3/11/17	Contig	SC	SAMEA1025390	GCA_001169305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/305/GCA_001169305.1_6805_5_20	-	SMRU1700
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.87412	50.7	-	LEUH01	9	5052	4704	6/19/15	2/26/17	Scaffold	Broad Institute	SAMN03280211	GCA_001030545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/545/GCA_001030545.1_Esch_coli_BIDMC103_V1	-	BIDMC103
Mycobacterium tuberculosis BTB11-343	1423550	PRJNA229331	229331	Terrabacteria group	Actinobacteria	4.37914	65.5	-	JKCX01	4	4269	4080	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414966	GCA_000679335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/335/GCA_000679335.1_Myco_tube_BTB11-343_V1	-	BTB11-343
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.0108	51.9	-	LHDM01	88	5126	4814	8/5/15	2/28/17	Contig	FDA	SAMN03894057	GCA_001238265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/265/GCA_001238265.1_Salmonella_enterica_CVM_N43448_v1.0	-	CVM N43448
Staphylococcus aureus M0506	1388335	PRJNA216505	216505	Terrabacteria group	Firmicutes	2.87132	32.8	-	JCHD01	44	3032	2846	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325459	GCA_000556785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/785/GCA_000556785.1_Stap_aure_M0506_V1	-	M0506
Staphylococcus aureus M0508	1388336	PRJNA216506	216506	Terrabacteria group	Firmicutes	2.91926	32.9	-	JCHE01	64	3101	2919	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325460	GCA_000556805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/805/GCA_000556805.1_Stap_aure_M0508_V1	-	M0508
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.00983	51.9	-	LHDO01	158	5148	4803	8/5/15	2/28/17	Contig	FDA	SAMN03894059	GCA_001238285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/285/GCA_001238285.1_Salmonella_enterica_CVM_N43450_v1.0	-	CVM N43450
Mycobacterium tuberculosis BTB11-371	1423551	PRJNA229332	229332	Terrabacteria group	Actinobacteria	4.46562	65.3	-	JKCW01	5	4294	4091	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414967	GCA_000679355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/355/GCA_000679355.1_Myco_tube_BTB11-371_V1	-	BTB11-371
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.2392	50.8	-	LEUI01	14	5431	5043	6/19/15	2/23/17	Scaffold	Broad Institute	SAMN03280212	GCA_001030555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/555/GCA_001030555.1_Esch_coli_BIDMC104_V1	-	BIDMC104
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12608	39.6	-	CNUU02	137	2320	2111	3/23/15	3/11/17	Contig	SC	SAMEA1032414	GCA_001169345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/345/GCA_001169345.2_6999_6_15	-	299801
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	5.93503	66.4	-	FRIH01	91	5636	5475	12/9/16	3/20/17	Contig	DTU	SAMEA2357281	GCA_900144555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/555/GCA_900144555.1_114	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.09283	38.9	-	MSPM01	96	3957	3782	3/3/17	3/6/17	Contig	JCVI	SAMN06117735	GCA_002017315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/315/GCA_002017315.1_ASM201731v1	-	ABUH516
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.89115	57	-	NGYP01	177	6037	5796	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917603	GCA_002235705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/705/GCA_002235705.1_ASM223570v1	-	10
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.44798	57.3	-	NGYW01	101	5503	5308	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917596	GCA_002235735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/735/GCA_002235735.1_ASM223573v1	-	3
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.91388	39	-	MSNM01	150	3833	3630	3/3/17	3/6/17	Contig	JCVI	SAMN06117778	GCA_002017335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/335/GCA_002017335.1_ASM201733v1	-	ABUH651
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.29141	66.5	-	FRIL01	129	6001	5791	12/9/16	3/20/17	Contig	DTU	SAMEA2357282	GCA_900144565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/565/GCA_900144565.1_115	-	-
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.08033	39.6	-	CMMA01	53	2298	2066	3/22/15	3/11/17	Contig	SC	SAMEA1029292	GCA_001169365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/365/GCA_001169365.1_7068_4_1	-	SMRU3121
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.21118	50.6	-	LEUJ01	13	5484	5116	6/19/15	2/24/17	Scaffold	Broad Institute	SAMN03280213	GCA_001030585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/585/GCA_001030585.1_Esch_coli_BIDMC105_V1	-	BIDMC105
Mycobacterium tuberculosis BTB12-001	1423552	PRJNA229333	229333	Terrabacteria group	Actinobacteria	4.40814	65.6	-	JKCV01	6	4292	4094	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414968	GCA_000679375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/375/GCA_000679375.1_Myco_tube_BTB12-001_V1	-	BTB12-001
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.69603	52.1	-	LHDN01	45	4804	4553	8/5/15	2/28/17	Contig	FDA	SAMN03894058	GCA_001238365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/365/GCA_001238365.1_Salmonella_enterica_CVM_N43449_v1.0	-	CVM N43449
Staphylococcus aureus M0509	1388337	PRJNA216507	216507	Terrabacteria group	Firmicutes	2.91475	32.9	-	JCHF01	61	3075	2889	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325461	GCA_000556825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/825/GCA_000556825.1_Stap_aure_M0509_V1	-	M0509
Staphylococcus aureus M0512	1388338	PRJNA216508	216508	Terrabacteria group	Firmicutes	2.9368	32.9	-	JCHG01	73	3151	2951	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325462	GCA_000556845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/845/GCA_000556845.1_Stap_aure_M0512_V1	-	M0512
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.85084	52	-	LHDL01	91	4925	4637	8/5/15	2/28/17	Contig	FDA	SAMN03894056	GCA_001238375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/375/GCA_001238375.1_Salmonella_enterica_CVM_N43447-R_v1.0	-	CVM N43447
Mycobacterium tuberculosis BTB12-002	1423553	PRJNA229334	229334	Terrabacteria group	Actinobacteria	4.4147	65.5	-	JKCU01	4	4289	4107	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414969	GCA_000679395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/395/GCA_000679395.1_Myco_tube_BTB12-002_V1	-	BTB12-002
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.41556	50.6	-	LEUK01	11	5631	5225	6/19/15	2/24/17	Scaffold	Broad Institute	SAMN03280214	GCA_001030595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/595/GCA_001030595.1_Esch_coli_BIDMC106_V1	-	BIDMC106
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.14231	39.6	-	CMMU01	50	2360	2103	3/23/15	3/10/17	Contig	SC	SAMEA1029294	GCA_001169385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/385/GCA_001169385.1_7068_4_3	-	SMRU3123
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.29284	66.5	-	FRIJ01	104	5969	5796	12/9/16	3/20/17	Contig	DTU	SAMEA2357280	GCA_900144575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/575/GCA_900144575.1_113	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.85283	38.8	-	MSNO01	75	3723	3594	3/3/17	3/6/17	Contig	JCVI	SAMN06117780	GCA_002017345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/345/GCA_002017345.1_ASM201734v1	-	ABUH657
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.82235	57.1	-	NGYT01	156	5954	5717	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917599	GCA_002235755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/755/GCA_002235755.1_ASM223575v1	-	6
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.89725	57	-	NGXS01	164	6045	5800	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917626	GCA_002235765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/765/GCA_002235765.1_ASM223576v1	-	33
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.87074	38.9	-	MSNP01	106	3737	3596	3/3/17	3/6/17	Contig	JCVI	SAMN06117781	GCA_002017355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/355/GCA_002017355.1_ASM201735v1	-	ABUH660
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.28878	66.5	-	FRIM01	125	5981	5789	12/9/16	3/20/17	Contig	DTU	SAMEA2357283	GCA_900144585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/585/GCA_900144585.1_116	-	-
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.12134	39.6	-	CMTG01	58	2292	2029	3/22/15	3/11/17	Contig	SC	SAMEA1022792	GCA_001169605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/605/GCA_001169605.1_5737_2_11	-	16077
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.47383	50.7	-	LEUL01	16	5799	5404	6/19/15	2/25/17	Scaffold	Broad Institute	SAMN03280215	GCA_001030625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/625/GCA_001030625.1_Esch_coli_BIDMC111_V1	-	BIDMC111
Mycobacterium tuberculosis BTB12-046	1423554	PRJNA229335	229335	Terrabacteria group	Actinobacteria	4.42033	65.6	-	JKCT01	7	4295	4116	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414970	GCA_000679415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/415/GCA_000679415.1_Myco_tube_BTB12-046_V1	-	BTB12-046
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93061	51.8	-	CUZB01	57	5110	4745	4/2/15	2/28/17	Contig	SC	SAMEA2160745	GCA_001239985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/985/GCA_001239985.1_10425_1_7	-	dtc105
Staphylococcus aureus M0514	1388339	PRJNA216510	216510	Terrabacteria group	Firmicutes	2.87199	32.8	-	JCHH01	43	3035	2873	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325463	GCA_000556865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/865/GCA_000556865.1_Stap_aure_M0514_V1	-	M0514
Staphylococcus aureus M0515	1388340	PRJNA216511	216511	Terrabacteria group	Firmicutes	2.91305	32.9	-	JCHI01	62	3069	2880	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325464	GCA_000556885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/885/GCA_000556885.1_Stap_aure_M0515_V1	-	M0515
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.80795	52.1	-	LHDR01	65	4941	4697	8/5/15	2/28/17	Contig	FDA	SAMN03894063	GCA_001240125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/125/GCA_001240125.1_Salmonella_enterica_CVM_N43454_v1.0	-	CVM N43454
Mycobacterium tuberculosis BTB12-054	1423555	PRJNA229336	229336	Terrabacteria group	Actinobacteria	4.40624	65.6	-	JKCS01	6	4275	4106	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414971	GCA_000679435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/435/GCA_000679435.1_Myco_tube_BTB12-054_V1	-	BTB12-054
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.22022	50.8	-	LEUM01	13	5475	5025	6/19/15	2/23/17	Scaffold	Broad Institute	SAMN03280216	GCA_001030635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/635/GCA_001030635.1_Esch_coli_BIDMC112_V1	-	BIDMC112
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.06593	39.8	-	CMNS01	46	2285	2052	3/23/15	3/11/17	Contig	SC	SAMEA2061490	GCA_001169665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/665/GCA_001169665.1_9803_7_12	-	34
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.07543	66.4	-	FRIN01	191	5840	5604	12/9/16	3/20/17	Contig	DTU	SAMEA2357284	GCA_900144595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/595/GCA_900144595.1_117	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.87946	38.9	-	MSNT01	114	3751	3600	3/3/17	3/6/17	Contig	JCVI	SAMN06117785	GCA_002017395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/395/GCA_002017395.1_ASM201739v1	-	ABUH681
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.86729	57	-	NGYY01	169	6016	5776	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917594	GCA_002235815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/815/GCA_002235815.1_ASM223581v1	-	1
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.86728	57.1	-	NGXY01	96	5841	5583	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917620	GCA_002235835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/835/GCA_002235835.1_ASM223583v1	-	27
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.06392	38.9	-	MSNX01	83	3966	3811	3/3/17	3/6/17	Contig	JCVI	SAMN06117736	GCA_002017405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/405/GCA_002017405.1_ASM201740v1	-	ABUH519
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.17697	66.4	-	FRIO01	211	5938	5681	12/9/16	3/20/17	Contig	DTU	SAMEA2357285	GCA_900144605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/605/GCA_900144605.1_118	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08927	39.5	-	CNSI02	135	2299	2079	3/22/15	3/5/17	Contig	SC	SAMEA1032672	GCA_001169825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/825/GCA_001169825.2_6999_3_10	-	35100
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.22222	50.6	-	LEUO01	7	5438	5081	6/19/15	2/23/17	Scaffold	Broad Institute	SAMN03280218	GCA_001030665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/665/GCA_001030665.1_Esch_coli_BIDMC114_V1	-	BIDMC114
Mycobacterium tuberculosis BTB12-094	1423556	PRJNA229337	229337	Terrabacteria group	Actinobacteria	4.41932	65.5	-	JKCR01	5	4303	4095	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414972	GCA_000679455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/455/GCA_000679455.1_Myco_tube_BTB12-094_V1	-	BTB12-094
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.87133	52	-	LHDS01	96	4949	4657	8/5/15	2/28/17	Contig	FDA	SAMN03894064	GCA_001240135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/135/GCA_001240135.1_Salmonella_enterica_CVM_N43455_v1.0	-	CVM N43455
Staphylococcus aureus M0516	1388341	PRJNA216512	216512	Terrabacteria group	Firmicutes	2.89693	32.8	-	JCHJ01	65	3069	2900	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325465	GCA_000556905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/905/GCA_000556905.1_Stap_aure_M0516_V1	-	M0516
Staphylococcus aureus M0518	1388342	PRJNA216513	216513	Terrabacteria group	Firmicutes	2.90824	32.8	-	JCHK01	85	3077	2881	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325466	GCA_000556925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/925/GCA_000556925.1_Stap_aure_M0518_V1	-	M0518
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91091	52.1	-	LHDQ01	92	5054	4810	8/5/15	2/28/17	Contig	FDA	SAMN03894062	GCA_001240145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/145/GCA_001240145.1_Salmonella_enterica_CVM_N43453_v1.0	-	CVM N43453
Mycobacterium tuberculosis BTB12-162	1423557	PRJNA229338	229338	Terrabacteria group	Actinobacteria	4.42347	65.6	-	JKCQ01	14	4311	4101	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414973	GCA_000679475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/475/GCA_000679475.1_Myco_tube_BTB12-162_V1	-	BTB12-162
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.49783	50.7	-	LEUN01	9	5846	5433	6/19/15	2/23/17	Scaffold	Broad Institute	SAMN03280217	GCA_001030675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/030/675/GCA_001030675.1_Esch_coli_BIDMC113_V1	-	BIDMC113
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06395	39.6	-	CNRV02	167	2230	1998	3/23/15	3/11/17	Contig	SC	SAMEA1032615	GCA_001169885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/885/GCA_001169885.2_6999_2_18	-	R34-3224
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.28449	66.5	-	FRIQ01	160	6013	5794	12/9/16	3/20/17	Contig	DTU	SAMEA2357286	GCA_900144615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/615/GCA_900144615.1_119	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.96408	38.8	-	MSNU01	114	3842	3688	3/3/17	3/6/17	Contig	JCVI	SAMN06117786	GCA_002017415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/415/GCA_002017415.1_ASM201741v1	-	ABUH687
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.40916	57.3	-	NGYD01	115	5460	5262	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917615	GCA_002235875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/875/GCA_002235875.1_ASM223587v1	-	22
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.78693	57.1	-	NGYG01	171	5924	5690	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917612	GCA_002235895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/895/GCA_002235895.1_ASM223589v1	-	19
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.05393	38.9	-	MSNZ01	87	3962	3801	3/3/17	3/6/17	Contig	JCVI	SAMN06117738	GCA_002017425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/425/GCA_002017425.1_ASM201742v1	-	ABUH525
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.2072	66.4	-	FRIP01	199	5965	5728	12/9/16	3/20/17	Contig	DTU	SAMEA2357289	GCA_900144625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/625/GCA_900144625.1_120	-	-
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.06073	39.6	-	CMFY01	47	2244	1992	3/21/15	3/4/17	Contig	SC	SAMEA1029236	GCA_001169905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/905/GCA_001169905.1_7038_4_15	-	SMRU2943
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.55899	50.5	-	LEYN01	13	5806	5348	6/19/15	2/23/17	Scaffold	Broad Institute	SAMN03280340	GCA_001032735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/032/735/GCA_001032735.1_Esch_coli_CHS199_V1	-	CHS199
Mycobacterium tuberculosis BTB12-206	1423558	PRJNA229339	229339	Terrabacteria group	Actinobacteria	4.40334	65.6	-	JKCP01	7	4276	4108	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414974	GCA_000679495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/495/GCA_000679495.1_Myco_tube_BTB12-206_V1	-	BTB12-206
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.74924	52.1	-	LHDP01	49	4838	4613	8/5/15	2/28/17	Contig	FDA	SAMN03894061	GCA_001240155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/155/GCA_001240155.1_Salmonella_enterica_CVM_N43452_v1.0	-	CVM N43452
Staphylococcus aureus M0519	1388343	PRJNA216514	216514	Terrabacteria group	Firmicutes	2.9169	32.9	-	JCHL01	33	3081	2901	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325467	GCA_000556945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/945/GCA_000556945.1_Stap_aure_M0519_V1	-	M0519
Staphylococcus aureus M0520	1388344	PRJNA216515	216515	Terrabacteria group	Firmicutes	2.83323	32.8	-	JCHM01	38	2949	2770	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325468	GCA_000556965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/965/GCA_000556965.1_Stap_aure_M0520_V1	-	M0520
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.97267	51.9	-	LHDT01	70	5086	4849	8/5/15	2/28/17	Contig	FDA	SAMN03894065	GCA_001240225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/225/GCA_001240225.1_Salmonella_enterica_CVM_N43456_v1.0	-	CVM N43456
Mycobacterium tuberculosis BTB12-211	1423559	PRJNA229340	229340	Terrabacteria group	Actinobacteria	4.42298	65.5	-	JKCO01	15	4301	4097	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414975	GCA_000679515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/515/GCA_000679515.1_Myco_tube_BTB12-211_V1	-	BTB12-211
Escherichia coli	562	PRJNA284561	284561	Proteobacteria	Gammaproteobacteria	4.77425	50.8	-	LFKA01	51	4893	4657	7/14/15	2/23/17	Scaffold	University of the Sunshine Coast	SAMN03782450	GCA_001077865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/865/GCA_001077865.1_ASM107786v1	-	KIC-1
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.06211	39.5	-	CMOJ01	92	2271	2034	3/23/15	3/4/17	Contig	SC	SAMEA2061485	GCA_001169925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/925/GCA_001169925.1_9803_7_29	-	15C
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.04622	66.4	-	FRIR01	149	5777	5575	12/9/16	3/20/17	Contig	DTU	SAMEA2357290	GCA_900144635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/635/GCA_900144635.1_121	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.04648	38.9	-	MSOA01	78	3928	3784	3/3/17	3/6/17	Contig	JCVI	SAMN06117741	GCA_002017475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/475/GCA_002017475.1_ASM201747v1	-	ABUH534
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.44416	57.3	-	NGYO01	125	5506	5305	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917604	GCA_002235915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/915/GCA_002235915.1_ASM223591v1	-	11
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.43954	57.3	-	NGYI01	146	5513	5297	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917610	GCA_002235935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/935/GCA_002235935.1_ASM223593v1	-	17
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.99222	38.8	-	MSOB01	54	3888	3725	3/3/17	3/6/17	Contig	JCVI	SAMN06117742	GCA_002017485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/485/GCA_002017485.1_ASM201748v1	-	ABUH537
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.28874	66.5	-	FRIS01	126	5980	5794	12/9/16	3/20/17	Contig	DTU	SAMEA2357291	GCA_900144645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/645/GCA_900144645.1_122	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.99938	39.7	-	CNPL02	147	2141	1954	3/23/15	3/5/17	Contig	SC	SAMEA1032546	GCA_001169965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/965/GCA_001169965.2_6930_8_19	-	R34-3025
Escherichia coli	562	PRJNA284564	284564	Proteobacteria	Gammaproteobacteria	4.77379	50.8	-	LFJX01	48	4894	4657	7/14/15	2/24/17	Scaffold	University of the Sunshine Coast	SAMN03782453	GCA_001077935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/935/GCA_001077935.1_ASM107793v1	-	46-4
Mycobacterium tuberculosis BTB12-294	1423560	PRJNA229341	229341	Terrabacteria group	Actinobacteria	4.42945	65.5	-	JKCN01	4	4300	4089	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414976	GCA_000679535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/535/GCA_000679535.1_Myco_tube_BTB12-294_V1	-	BTB12-294
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.72936	52.1	-	LHDU01	37	4844	4596	8/5/15	2/28/17	Contig	FDA	SAMN03894066	GCA_001240255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/255/GCA_001240255.1_Salmonella_enterica_CVM_N43457_v1.0	-	CVM N43457
Staphylococcus aureus M0522	1388345	PRJNA216516	216516	Terrabacteria group	Firmicutes	2.84426	32.7	-	JCHN01	59	2978	2795	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325469	GCA_000556985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/556/985/GCA_000556985.1_Stap_aure_M0522_V1	-	M0522
Staphylococcus aureus M0523	1388346	PRJNA216517	216517	Terrabacteria group	Firmicutes	2.80882	32.8	-	JCHO01	32	2929	2766	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325470	GCA_000557005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/005/GCA_000557005.1_Stap_aure_M0523_V1	-	M0523
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.72999	52.1	-	LHDV01	36	4845	4591	8/5/15	2/28/17	Contig	FDA	SAMN03894067	GCA_001240265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/265/GCA_001240265.1_Salmonella_enterica_CVM_N43458_v1.0	-	CVM N43458
Mycobacterium tuberculosis BTB12-304	1423561	PRJNA229342	229342	Terrabacteria group	Actinobacteria	4.40865	65.5	-	JKCM01	6	4271	4107	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414977	GCA_000679555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/555/GCA_000679555.1_Myco_tube_BTB12-304_V1	-	BTB12-304
Escherichia coli	562	PRJNA284563	284563	Proteobacteria	Gammaproteobacteria	5.17744	50.6	-	LFJY01	107	5378	5042	7/14/15	2/24/17	Scaffold	University of the Sunshine Coast	SAMN03782452	GCA_001077945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/945/GCA_001077945.1_ASM107794v1	-	73-89
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.00766	39.7	-	CKXO01	101	2194	1990	3/21/15	3/4/17	Contig	SC	SAMEA1025974	GCA_001170085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/085/GCA_001170085.1_6823_7_10	-	SMRU2002
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.42424	66.4	-	FRIU01	161	6145	5898	12/9/16	3/20/17	Contig	DTU	SAMEA2357292	GCA_900144655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/655/GCA_900144655.1_123	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.96213	39	-	MSOF01	122	3893	3692	3/3/17	3/6/17	Contig	JCVI	SAMN06117747	GCA_002017515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/515/GCA_002017515.1_ASM201751v1	-	ABUH552
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.44613	57.3	-	NGYS01	100	5498	5305	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917600	GCA_002236015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/236/015/GCA_002236015.1_ASM223601v1	-	7
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.62622	57.2	-	NGYV01	114	5701	5492	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917597	GCA_002236055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/236/055/GCA_002236055.1_ASM223605v1	-	4
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.06156	38.9	-	MSOG01	81	3933	3797	3/3/17	3/6/17	Contig	JCVI	SAMN06117748	GCA_002017525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/525/GCA_002017525.1_ASM201752v1	-	ABUH555
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.43034	66.4	-	FRIT01	143	6132	5907	12/9/16	3/20/17	Contig	DTU	SAMEA2357293	GCA_900144665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/665/GCA_900144665.1_124	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04241	39.6	-	CNOB02	116	2240	2032	3/22/15	3/11/17	Contig	SC	SAMEA1032651	GCA_001170225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/225/GCA_001170225.2_6925_2_74	-	R34-3055
Escherichia coli	562	PRJNA284559	284559	Proteobacteria	Gammaproteobacteria	4.86833	50.4	-	LFKC01	48	4970	4708	7/14/15	2/24/17	Scaffold	University of the Sunshine Coast	SAMN03782448	GCA_001077955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/955/GCA_001077955.1_ASM107795v1	-	HMLN-1
Mycobacterium tuberculosis BTB12-305	1423562	PRJNA229343	229343	Terrabacteria group	Actinobacteria	4.41136	65.5	-	JKCL01	10	4304	4094	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414978	GCA_000679575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/575/GCA_000679575.1_Myco_tube_BTB12-305_V1	-	BTB12-305
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.95917	52.1	-	LHDW01	101	5131	4831	8/5/15	2/28/17	Contig	FDA	SAMN03894068	GCA_001240275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/275/GCA_001240275.1_Salmonella_enterica_CVM_N43459_v1.0	-	CVM N43459
Staphylococcus aureus M0525	1388347	PRJNA216518	216518	Terrabacteria group	Firmicutes	2.86989	32.8	-	JCHP01	48	3020	2855	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325471	GCA_000557025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/025/GCA_000557025.1_Stap_aure_M0525_V1	-	M0525
Staphylococcus aureus M0527	1388348	PRJNA216519	216519	Terrabacteria group	Firmicutes	2.88229	32.7	-	JCHQ01	66	3057	2933	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325472	GCA_000557045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/045/GCA_000557045.1_Stap_aure_M0527_V1	-	M0527
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.93522	51.9	-	LHDY01	67	5025	4791	8/5/15	2/28/17	Contig	FDA	SAMN03894070	GCA_001240335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/335/GCA_001240335.1_Salmonella_enterica_CVM_N43461_v1.0	-	CVM N43461
Mycobacterium tuberculosis BTB12-313	1423563	PRJNA229344	229344	Terrabacteria group	Actinobacteria	4.43909	65.5	-	JKCK01	6	4306	4098	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414979	GCA_000679595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/595/GCA_000679595.1_Myco_tube_BTB12-313_V1	-	BTB12-313
Escherichia coli	562	PRJNA284560	284560	Proteobacteria	Gammaproteobacteria	4.87855	50.6	-	LFKB01	110	5001	4755	7/14/15	2/24/17	Scaffold	University of the Sunshine Coast	SAMN03782449	GCA_001078015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/015/GCA_001078015.1_ASM107801v1	-	PC-1
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.14256	39.6	-	CLWF01	80	2378	2144	3/21/15	3/11/17	Contig	SC	SAMEA1025903	GCA_001170305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/305/GCA_001170305.1_6983_4_85	-	SMRU2293
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.42812	66.4	-	FRIV01	171	6157	5907	12/9/16	3/20/17	Contig	DTU	SAMEA2357295	GCA_900144675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/675/GCA_900144675.1_125	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.95051	39	-	MSOL01	83	3794	3666	3/3/17	3/6/17	Contig	JCVI	SAMN06117753	GCA_002017555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/555/GCA_002017555.1_ASM201755v1	-	ABUH576
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.72051	57.1	-	NGWN01	134	5866	5629	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917657	GCA_002236085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/236/085/GCA_002236085.1_ASM223608v1	-	64
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.85373	57	-	NGWM01	160	6014	5756	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917658	GCA_002236195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/236/195/GCA_002236195.1_ASM223619v1	-	65
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.90733	38.9	-	MSOJ01	92	3751	3586	3/3/17	3/6/17	Contig	JCVI	SAMN06117751	GCA_002017565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/565/GCA_002017565.1_ASM201756v1	-	ABUH567
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.40611	66.3	-	FRIW01	252	6193	5891	12/9/16	3/20/17	Contig	DTU	SAMEA2357296	GCA_900144685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/685/GCA_900144685.1_126	-	-
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.19012	39.6	-	CMJM01	70	2435	2199	3/23/15	3/11/17	Contig	SC	SAMEA1026035	GCA_001170485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/485/GCA_001170485.1_7038_8_37	-	SMRU2245
Escherichia coli M114	656416	PRJNA39037	39037	Proteobacteria	Gammaproteobacteria	5.42718	50.3	-	AEMV01	127	5747	5164	7/23/15	2/24/17	Scaffold	Broad Institute	SAMN03896124	GCA_001186315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/186/315/GCA_001186315.2_Esch_coli_M114_V2	-	M114
Mycobacterium tuberculosis BTB12-314	1423564	PRJNA229345	229345	Terrabacteria group	Actinobacteria	4.42796	65.5	-	JKCJ01	6	4304	4103	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414980	GCA_000679615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/615/GCA_000679615.1_Myco_tube_BTB12-314_V1	-	BTB12-314
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.66851	52.2	-	LHDX01	108	4764	4505	8/5/15	2/28/17	Contig	FDA	SAMN03894069	GCA_001240345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/345/GCA_001240345.1_Salmonella_enterica_CVM_N43460_v1.0	-	CVM N43460
Staphylococcus aureus M0530	1388349	PRJNA216520	216520	Terrabacteria group	Firmicutes	2.91555	32.8	-	JCHR01	59	3113	2933	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325473	GCA_000557065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/065/GCA_000557065.1_Stap_aure_M0530_V1	-	M0530
Staphylococcus aureus M0532	1388350	PRJNA216521	216521	Terrabacteria group	Firmicutes	2.8936	32.8	-	JCHS01	58	3074	2903	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325474	GCA_000557085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/085/GCA_000557085.1_Stap_aure_M0532_V1	-	M0532
"Salmonella enterica subsp. enterica serovar 4,12:i:-"	353569	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.93456	52.2	-	LHEA01	72	5115	4858	8/5/15	5/30/17	Contig	FDA	SAMN03894072	GCA_001240385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/385/GCA_001240385.1_Salmonella_enterica_CVM_N43463_v1.0	-	CVM N43463
Mycobacterium tuberculosis BTB12-315	1423565	PRJNA229346	229346	Terrabacteria group	Actinobacteria	4.406	65.5	-	JKCI01	2	4279	4103	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414981	GCA_000679635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/635/GCA_000679635.1_Myco_tube_BTB12-315_V1	-	BTB12-315
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.87461	50.6	-	LGZC01	174	5129	4739	8/3/15	2/24/17	Scaffold	FDA/CFSAN	SAMN03455798	GCA_001191115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/115/GCA_001191115.1_CFSAN026783_02-NGE.clc	26430026	CFSAN026783
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.13287	39.6	-	CLSP01	74	2404	2168	3/21/15	3/11/17	Contig	SC	SAMEA1028958	GCA_001170525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/525/GCA_001170525.1_6972_4_17	-	SMRU2609
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.41081	66.3	-	FRIX01	275	6202	5882	12/9/16	3/20/17	Contig	DTU	SAMEA2357298	GCA_900144695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/695/GCA_900144695.1_127	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.90484	38.8	-	MSOT01	101	3754	3581	3/3/17	3/6/17	Contig	JCVI	SAMN06117762	GCA_002017595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/595/GCA_002017595.1_ASM201759v1	-	ABUH603
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.86991	57.1	-	NGYK01	226	6064	5788	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917608	GCA_002236365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/236/365/GCA_002236365.1_ASM223636v1	-	15
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.86691	57	-	NGYQ01	171	6013	5777	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917602	GCA_002236385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/236/385/GCA_002236385.1_ASM223638v1	-	9
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.27151	38.9	-	MSOW01	379	4295	3969	3/3/17	3/6/17	Contig	JCVI	SAMN06117766	GCA_002017605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/605/GCA_002017605.1_ASM201760v1	-	ABUH615
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.42502	66.3	-	FRIY01	228	6194	5897	12/9/16	3/20/17	Contig	DTU	SAMEA2357301	GCA_900144705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/705/GCA_900144705.1_129	-	-
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11675	39.6	-	CMLJ01	80	2348	2120	3/23/15	3/11/17	Contig	SC	SAMEA1029448	GCA_001170565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/565/GCA_001170565.1_7054_6_12	-	SMRU3084
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.24776	50.4	-	LGZG01	227	5700	5232	8/3/15	2/24/17	Scaffold	FDA/CFSAN	SAMN03455855	GCA_001191265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/265/GCA_001191265.1_CFSAN026840_01-NGE.clc	26430026	CFSAN026840
Mycobacterium tuberculosis BTB12-384	1423566	PRJNA229347	229347	Terrabacteria group	Actinobacteria	4.4054	65.6	-	JKCH01	74	4293	4102	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414982	GCA_000679655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/655/GCA_000679655.1_Myco_tube_BTB12-384_V1	-	BTB12-384
Salmonella enterica subsp. enterica serovar Senftenberg	28150	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.79871	52	-	LHDZ01	74	4849	4611	8/5/15	2/28/17	Contig	FDA	SAMN03894071	GCA_001240395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/395/GCA_001240395.1_Salmonella_enterica_CVM_N43462_v1.0	-	CVM N43462
Staphylococcus aureus M0533	1388351	PRJNA216522	216522	Terrabacteria group	Firmicutes	2.90703	32.9	-	JCHT01	55	3091	2907	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325475	GCA_000557105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/105/GCA_000557105.1_Stap_aure_M0533_V1	-	M0533
Staphylococcus aureus M0534	1388352	PRJNA216523	216523	Terrabacteria group	Firmicutes	2.92423	32.9	-	JCHU01	29	3089	2918	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325476	GCA_000557125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/125/GCA_000557125.1_Stap_aure_M0534_V1	-	M0534
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91037	52	-	LHEB01	141	5001	4689	8/5/15	2/28/17	Contig	FDA	SAMN03894074	GCA_001240425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/425/GCA_001240425.1_Salmonella_enterica_CVM_N43465_v1.0	-	CVM N43465
Mycobacterium tuberculosis BTB12-400	1423567	PRJNA229348	229348	Terrabacteria group	Actinobacteria	4.40956	65.5	-	JKCG01	8	4285	4104	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414983	GCA_000679675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/675/GCA_000679675.1_Myco_tube_BTB12-400_V1	-	BTB12-400
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.41329	50.4	-	LGZS01	239	5914	5470	8/3/15	2/24/17	Scaffold	FDA/CFSAN	SAMN03455840	GCA_001191465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/465/GCA_001191465.1_CFSAN026825_01-NGE.clc	26430026	CFSAN026825
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08412	39.6	-	CLWC01	82	2300	2066	3/21/15	3/10/17	Contig	SC	SAMEA1026236	GCA_001170605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/605/GCA_001170605.1_6983_4_81	-	SMRU2289
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.4179	66.3	-	FRIZ01	199	6171	5904	12/9/16	3/20/17	Contig	DTU	SAMEA2357300	GCA_900144715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/715/GCA_900144715.1_128	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.83392	38.9	-	MSOU01	110	3710	3568	3/3/17	3/6/17	Contig	JCVI	SAMN06117763	GCA_002017615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/615/GCA_002017615.1_ASM201761v1	-	ABUH606
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.78279	57.1	-	NGYF01	194	5937	5702	7/28/17	8/1/17	Contig	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917613	GCA_002236445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/236/445/GCA_002236445.1_ASM223644v1	-	20
Klebsiella pneumoniae	573	PRJNA380748	380748	Proteobacteria	Gammaproteobacteria	5.93493	56.7	-	NBIK01	183	6084	5731	8/1/17	8/3/17	Contig	National Institute of Hygiene and Epidemiology	SAMN06647478	GCA_002237985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/985/GCA_002237985.1_ASM223798v1	-	VD412
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.93887	39	-	MSOY01	111	3796	3640	3/3/17	3/6/17	Contig	JCVI	SAMN06117768	GCA_002017625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/625/GCA_002017625.1_ASM201762v1	-	ABUH621
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.42053	66.3	-	FRJA01	198	6168	5902	12/9/16	3/20/17	Contig	DTU	SAMEA2357303	GCA_900144725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/725/GCA_900144725.1_130	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.03278	39.7	-	CQUN01	68	2239	2032	3/23/15	3/11/17	Contig	SC	SAMEA1025113	GCA_001170625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/625/GCA_001170625.1_6710_6_13	-	SMRU1357
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.23364	50.5	-	LHAB01	172	5525	5062	8/3/15	2/24/17	Scaffold	FDA/CFSAN	SAMN03455863	GCA_001191525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/525/GCA_001191525.1_CFSAN026848_01-NGE.clc	26430026	CFSAN026848
Mycobacterium tuberculosis BTB12-449	1423568	PRJNA229349	229349	Terrabacteria group	Actinobacteria	4.4078	65.6	-	JKCF01	4	4294	4101	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414984	GCA_000679695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/695/GCA_000679695.1_Myco_tube_BTB12-449_V1	-	BTB12-449
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91033	52	-	LHEC01	125	4996	4685	8/5/15	2/28/17	Contig	FDA	SAMN03894075	GCA_001240465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/465/GCA_001240465.1_Salmonella_enterica_CVM_N43466_v1.0	-	CVM N43466
Staphylococcus aureus M0537	1388354	PRJNA216525	216525	Terrabacteria group	Firmicutes	2.90134	32.9	-	JCHV01	71	3067	2901	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325478	GCA_000557145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/145/GCA_000557145.1_Stap_aure_M0537_V1	-	M0537
Staphylococcus aureus M0540	1388355	PRJNA216526	216526	Terrabacteria group	Firmicutes	2.89817	32.8	-	JCHW01	63	3075	2897	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325479	GCA_000557165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/165/GCA_000557165.1_Stap_aure_M0540_V1	-	M0540
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.94996	52.1	-	LHED01	149	5071	4824	8/5/15	2/28/17	Contig	FDA	SAMN03894078	GCA_001240475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/475/GCA_001240475.1_Salmonella_enterica_CVM_N43469_v1.0	-	CVM N43469
Mycobacterium tuberculosis BTB13-063	1423570	PRJNA229351	229351	Terrabacteria group	Actinobacteria	4.41354	65.6	-	JKCD01	5	4295	4098	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414986	GCA_000679715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/715/GCA_000679715.1_Myco_tube_BTB13-063_V1	-	BTB13-063
Escherichia coli	562	PRJNA291606	291606	Proteobacteria	Gammaproteobacteria	5.58472	50.6	-	LHAT01	300	5851	5426	8/10/15	2/24/17	Scaffold	National Institute of Health Dr Ricardo Jorge	SAMN03946217	GCA_001263735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/735/GCA_001263735.1_ASM126373v1	26404585	INSLA289
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.18739	39.5	-	CPRI01	98	2421	2190	3/23/15	3/10/17	Contig	SC	SAMEA1020733	GCA_001170705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/705/GCA_001170705.1_6187_4_12	-	S-044
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.42259	66.3	-	FRJB01	203	6169	5909	12/9/16	3/20/17	Contig	DTU	SAMEA2357304	GCA_900144735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/735/GCA_900144735.1_131	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.05002	38.9	-	MSOZ01	97	3963	3811	3/3/17	3/6/17	Contig	JCVI	SAMN06117770	GCA_002017675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/675/GCA_002017675.1_ASM201767v1	-	ABUH627
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.56831	57.2	-	NIUE01	78	5694	5395	8/2/17	8/4/17	Contig	JCVI	SAMN07203032	GCA_002239705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/705/GCA_002239705.1_ASM223970v1	-	CREC014-1
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.85365	56.7	-	NIUD01	169	5906	5592	8/2/17	8/4/17	Contig	JCVI	SAMN07203007	GCA_002239715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/715/GCA_002239715.1_ASM223971v1	-	CREC003-1
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.90455	38.8	-	MSPB01	76	3778	3647	3/3/17	3/6/17	Contig	JCVI	SAMN06117720	GCA_002017685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/685/GCA_002017685.1_ASM201768v1	-	ABUH453
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.42136	66.3	-	FRJC01	210	6183	5900	12/9/16	3/20/17	Contig	DTU	SAMEA2357306	GCA_900144745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/745/GCA_900144745.1_132	-	-
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.14653	39.7	-	CMVH01	93	2317	2031	3/22/15	3/11/17	Contig	SC	SAMEA1989539	GCA_001170725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/725/GCA_001170725.1_5756_5_12	-	276
Escherichia coli	562	PRJDB3936	293525	Proteobacteria	Gammaproteobacteria	5.44469	50.4	-	BBYP01	386	6000	5373	8/20/15	2/24/17	Scaffold	"ICLAS Monitoring Center, Central Institute for Experimental Animals"	SAMD00031374	GCA_001297725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/725/GCA_001297725.1_Ecoli_assembly01	26450733	R811
Mycobacterium tuberculosis BTB13-089	1423571	PRJNA229352	229352	Terrabacteria group	Actinobacteria	4.39886	65.5	-	JKCC01	9	4289	4100	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414987	GCA_000679735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/735/GCA_000679735.1_Myco_tube_BTB13-089_V1	-	BTB13-089
"Salmonella enterica subsp. enterica serovar 8,(20):-:z6"	1192774	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.01667	51.9	-	LHEE01	103	5146	4818	8/5/15	5/30/17	Contig	FDA	SAMN03894080	GCA_001240505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/505/GCA_001240505.1_Salmonella_enterica_CVM_N43471_v1.0	-	CVM N43471
Staphylococcus aureus M0541	1388356	PRJNA216527	216527	Terrabacteria group	Firmicutes	2.87207	32.7	-	JCHX01	59	3026	2828	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325480	GCA_000557185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/185/GCA_000557185.1_Stap_aure_M0541_V1	-	M0541
Staphylococcus aureus M0542	1388357	PRJNA216528	216528	Terrabacteria group	Firmicutes	2.91717	32.7	-	JCHY01	74	3078	2950	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325481	GCA_000557205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/205/GCA_000557205.1_Stap_aure_M0542_V1	-	M0542
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.75624	52.2	-	LHEF01	44	4847	4621	8/5/15	2/28/17	Contig	FDA	SAMN03894081	GCA_001240525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/525/GCA_001240525.1_Salmonella_enterica_CVM_N43472_v1.0	-	CVM N43472
Mycobacterium tuberculosis BTB13-127	1423572	PRJNA229353	229353	Terrabacteria group	Actinobacteria	4.37995	65.6	-	JKCB01	67	4309	4105	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414988	GCA_000679755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/755/GCA_000679755.1_Myco_tube_BTB13-127_V1	-	BTB13-127
Escherichia coli	562	PRJNA277539	277539	Proteobacteria	Gammaproteobacteria	5.07234	50.7	-	LDYJ01	165	5220	4825	10/9/15	2/24/17	Scaffold	University of Alberta	SAMN03393386	GCA_001309455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/455/GCA_001309455.1_ASM130945v1	26441869	AW1.7
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.03768	39.7	-	CRRR01	52	2250	2029	3/22/15	3/11/17	Contig	SC	SAMEA1024611	GCA_001170825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/825/GCA_001170825.1_6805_1_4	-	SMRU1012
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.40768	66.3	-	FRJD01	249	6199	5885	12/9/16	3/20/17	Contig	DTU	SAMEA2357307	GCA_900144755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/755/GCA_900144755.1_133	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.02119	39	-	MSPD01	129	3949	3750	3/3/17	3/6/17	Contig	JCVI	SAMN06117723	GCA_002017705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/705/GCA_002017705.1_ASM201770v1	-	ABUH468
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.49608	57.1	-	NIUG01	86	5533	5256	8/2/17	8/4/17	Contig	JCVI	SAMN07203029	GCA_002239805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/805/GCA_002239805.1_ASM223980v1	-	4REI026-2
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.49056	57.2	-	NIUF01	83	5533	5248	8/2/17	8/4/17	Contig	JCVI	SAMN07203030	GCA_002239815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/815/GCA_002239815.1_ASM223981v1	-	CREI026-1
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.01101	39	-	MSPG01	118	3940	3752	3/3/17	3/6/17	Contig	JCVI	SAMN06117726	GCA_002017735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/735/GCA_002017735.1_ASM201773v1	-	ABUH477
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.25468	66.5	-	FRJF01	361	6162	5740	12/9/16	3/20/17	Contig	DTU	SAMEA2357309	GCA_900144765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/765/GCA_900144765.1_135	-	-
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07164	39.6	-	CKHB01	38	2268	2012	3/21/15	3/11/17	Contig	SC	SAMEA1023663	GCA_001170945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/945/GCA_001170945.1_6631_1_6	-	type strain: N
Escherichia coli	562	PRJNA277539	277539	Proteobacteria	Gammaproteobacteria	5.56256	50.5	-	LDYN01	280	6163	5635	10/9/15	2/24/17	Scaffold	University of Alberta	SAMN03393401	GCA_001309465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/465/GCA_001309465.1_ASM130946v1	26441869	May-44
Mycobacterium tuberculosis BTB13-128	1423573	PRJNA229354	229354	Terrabacteria group	Actinobacteria	4.38133	65.6	-	JKCA01	56	4312	4109	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414989	GCA_000679775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/775/GCA_000679775.1_Myco_tube_BTB13-128_V1	-	BTB13-128
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.75699	52.1	-	LHEG01	57	4852	4614	8/5/15	2/28/17	Contig	FDA	SAMN03894082	GCA_001240545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/545/GCA_001240545.1_Salmonella_enterica_CVM_N43473_v1.0	-	CVM N43473
Staphylococcus aureus M0543	1388358	PRJNA216529	216529	Terrabacteria group	Firmicutes	2.90249	32.9	-	JCHZ01	57	3065	2868	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325482	GCA_000557225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/225/GCA_000557225.1_Stap_aure_M0543_V1	-	M0543
Staphylococcus aureus M0544	1388359	PRJNA216530	216530	Terrabacteria group	Firmicutes	2.86993	32.9	-	JCIA01	43	3017	2829	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325483	GCA_000557245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/245/GCA_000557245.1_Stap_aure_M0544_V1	-	M0544
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.75966	52.2	-	LHEH01	60	4852	4628	8/5/15	2/28/17	Contig	FDA	SAMN03894083	GCA_001240555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/555/GCA_001240555.1_Salmonella_enterica_CVM_N43474_v1.0	-	CVM N43474
Mycobacterium tuberculosis BTB13-156	1423574	PRJNA229355	229355	Terrabacteria group	Actinobacteria	4.43985	65.5	-	JKBZ01	7	4305	4109	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414990	GCA_000679795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/795/GCA_000679795.1_Myco_tube_BTB13-156_V1	-	BTB13-156
Escherichia coli	562	PRJNA277539	277539	Proteobacteria	Gammaproteobacteria	5.03107	50.6	-	LDYK01	146	5175	4786	10/9/15	2/24/17	Scaffold	University of Alberta	SAMN03393387	GCA_001309475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/475/GCA_001309475.1_ASM130947v1	26441869	AW1.7-delta-pHR1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.99443	39.7	-	CODX02	93	2174	1977	3/22/15	3/11/17	Contig	SC	SAMEA1463267	GCA_001171025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/025/GCA_001171025.2_7622_4_34	-	LE4111
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.29897	66.5	-	FRJE01	239	6117	5750	12/9/16	3/20/17	Contig	DTU	SAMEA2357308	GCA_900144775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/775/GCA_900144775.1_134	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.99188	39	-	MSPJ01	132	3912	3715	3/3/17	3/6/17	Contig	JCVI	SAMN06117730	GCA_002017745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/745/GCA_002017745.1_ASM201774v1	-	ABUH501
Klebsiella pneumoniae	573	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.61624	56.8	-	NIUJ01	80	5638	5374	8/2/17	8/4/17	Contig	JCVI	SAMN07203013	GCA_002239875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/875/GCA_002239875.1_ASM223987v1	-	ESBL-SIUK-7
Klebsiella pneumoniae	573	PRJNA351846	351846	Proteobacteria	Gammaproteobacteria	5.50831	57.2	-	NIZA01	71	5551	5297	8/2/17	8/4/17	Contig	JCVI	SAMN05960913	GCA_002239965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/965/GCA_002239965.1_ASM223996v1	-	G746
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.07409	39	-	MSPK01	117	4008	3843	3/3/17	3/6/17	Contig	JCVI	SAMN06117731	GCA_002017765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/765/GCA_002017765.1_ASM201776v1	-	ABUH504
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	5.78263	66	-	FRJW01	1252	6215	5069	12/9/16	3/20/17	Contig	DTU	SAMEA2357315	GCA_900144815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/815/GCA_900144815.1_139	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05249	39.7	-	CNWR02	142	2228	2024	3/22/15	3/11/17	Contig	SC	SAMEA1032473	GCA_001171085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/085/GCA_001171085.2_7001_2_2	-	R34-3102
Escherichia coli	562	PRJNA277539	277539	Proteobacteria	Gammaproteobacteria	5.32672	51	-	LDYI01	184	5673	5244	10/9/15	2/24/17	Scaffold	University of Alberta	SAMN03393385	GCA_001309485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/485/GCA_001309485.1_ASM130948v1	26441869	AW1.3
Mycobacterium tuberculosis BTB13-206	1423575	PRJNA229356	229356	Terrabacteria group	Actinobacteria	4.40135	65.5	-	JKBY01	2	4281	4111	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414991	GCA_000679815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/815/GCA_000679815.1_Myco_tube_BTB13-206_V1	-	BTB13-206
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.99108	51.9	-	LHEI01	119	5096	4778	8/5/15	2/28/17	Contig	FDA	SAMN03894087	GCA_001240565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/565/GCA_001240565.1_Salmonella_enterica_CVM_N43478_v1.0	-	CVM N43478
Staphylococcus aureus M0545	1388360	PRJNA216531	216531	Terrabacteria group	Firmicutes	2.87093	32.8	-	JCIB01	45	3036	2868	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325484	GCA_000557265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/265/GCA_000557265.1_Stap_aure_M0545_V1	-	M0545
Staphylococcus aureus M0546	1388361	PRJNA216532	216532	Terrabacteria group	Firmicutes	2.84119	32.9	-	JCIC01	38	2958	2780	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325485	GCA_000557285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/285/GCA_000557285.1_Stap_aure_M0546_V1	-	M0546
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.85444	52.2	-	LHEJ01	96	4998	4725	8/5/15	2/28/17	Contig	FDA	SAMN03894088	GCA_001240625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/625/GCA_001240625.1_Salmonella_enterica_CVM_N43479_v1.0	-	CVM N43479
Mycobacterium tuberculosis BTB13-222	1423576	PRJNA229357	229357	Terrabacteria group	Actinobacteria	4.40566	65.5	-	JKBX01	3	4278	4108	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414992	GCA_000679835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/835/GCA_000679835.1_Myco_tube_BTB13-222_V1	-	BTB13-222
Escherichia coli	562	PRJNA277539	277539	Proteobacteria	Gammaproteobacteria	5.09324	50.7	-	LDYL01	111	5259	4896	10/9/15	2/24/17	Scaffold	University of Alberta	SAMN03393388	GCA_001309535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/535/GCA_001309535.1_ASM130953v1	26441869	DM18-3
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.05687	39.7	-	CKOH01	51	2246	2041	3/21/15	3/4/17	Contig	SC	SAMEA1023777	GCA_001171265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/265/GCA_001171265.1_6673_8_9	-	SMRU249
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	5.66351	65.9	-	FRJV01	1399	6163	4907	12/9/16	3/20/17	Contig	DTU	SAMEA2357324	GCA_900144865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/865/GCA_900144865.1_145	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.95843	39	-	MSPI01	130	3893	3696	3/3/17	3/6/17	Contig	JCVI	SAMN06117728	GCA_002017795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/795/GCA_002017795.1_ASM201779v1	-	ABUH483
Klebsiella pneumoniae	573	PRJNA361484	361484	Proteobacteria	Gammaproteobacteria	5.56287	57	-	NIHK01	109	5577	5285	8/4/17	8/6/17	Contig	University of Sao Paulo	SAMN07195167	GCA_002241035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/035/GCA_002241035.1_ASM224103v1	-	ICBKpBL-III-03(1)
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.59081	57.2	-	NPZE01	88	5706	5411	8/11/17	8/15/17	Contig	JCVI	SAMN07450620	GCA_002246035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/035/GCA_002246035.1_ASM224603v1	-	KPCTRPRTH04
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.73372	38.9	-	MSPL01	40	3524	3387	3/3/17	3/6/17	Contig	JCVI	SAMN06117734	GCA_002017805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/017/805/GCA_002017805.1_ASM201780v1	-	ABUH513
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.29109	66.5	-	FRJH01	271	6132	5767	12/9/16	3/20/17	Contig	DTU	SAMEA2357327	GCA_900144905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/905/GCA_900144905.1_148	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04521	39.8	-	CNXV02	149	2228	2026	3/22/15	3/5/17	Contig	SC	SAMEA1463076	GCA_001171405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/405/GCA_001171405.2_7553_4_17	-	ND6137
Escherichia coli	562	PRJNA277539	277539	Proteobacteria	Gammaproteobacteria	4.95704	51	-	LDYM01	164	5115	4760	10/9/15	2/24/17	Scaffold	University of Alberta	SAMN03393389	GCA_001309555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/555/GCA_001309555.1_ASM130955v1	26441869	GM16-6
Mycobacterium tuberculosis BTB13-276	1423577	PRJNA229358	229358	Terrabacteria group	Actinobacteria	4.41471	65.5	-	JKBW01	5	4299	4099	4/30/14	3/8/17	Scaffold	Broad Institute	SAMN02414993	GCA_000679855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/855/GCA_000679855.1_Myco_tube_BTB13-276_V1	-	BTB13-276
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91996	52.1	-	LHEK01	85	5066	4816	8/5/15	2/28/17	Contig	FDA	SAMN03894089	GCA_001240635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/635/GCA_001240635.1_Salmonella_enterica_CVM_N43480_v1.0	-	CVM N43480
Staphylococcus aureus M0548	1388362	PRJNA216533	216533	Terrabacteria group	Firmicutes	2.91186	32.8	-	JCID01	65	3080	2903	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325486	GCA_000557305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/305/GCA_000557305.1_Stap_aure_M0548_V1	-	M0548
Staphylococcus aureus M0549	1388363	PRJNA216534	216534	Terrabacteria group	Firmicutes	2.93903	32.8	-	JCIE01	74	3134	2948	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325487	GCA_000557325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/325/GCA_000557325.1_Stap_aure_M0549_V1	-	M0549
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91879	52.1	-	LHEL01	111	5062	4812	8/5/15	2/28/17	Contig	FDA	SAMN03894090	GCA_001240675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/675/GCA_001240675.1_Salmonella_enterica_CVM_N43481_v1.0	-	CVM N43481
Mycobacterium tuberculosis XTB13-081	1427177	PRJNA229570	229570	Terrabacteria group	Actinobacteria	4.42646	65.6	-	JLMJ01	2	4299	4105	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419533	GCA_000679875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/875/GCA_000679875.1_Myco_tube_XTB13-081_V1	-	XTB13-081
Escherichia coli	562	PRJNA277539	277539	Proteobacteria	Gammaproteobacteria	5.39051	50.5	-	LDYO01	240	5834	5366	10/9/15	2/24/17	Scaffold	University of Alberta	SAMN03393412	GCA_001309565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/565/GCA_001309565.1_ASM130956v1	26441869	PARC448
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09129	39.5	-	CKIE01	69	2303	2078	3/21/15	3/4/17	Contig	SC	SAMEA1024133	GCA_001171425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/425/GCA_001171425.1_6631_3_2	-	23F
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.59816	66.2	-	FRJG01	124	6293	6099	12/9/16	3/20/17	Contig	DTU	SAMEA2357328	GCA_900144915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/915/GCA_900144915.1_149	-	-
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	3.80711	39.3	-	MWPK01	338	3720	3473	3/6/17	3/8/17	Contig	University of Sao Paulo	SAMN06446008	GCA_002018935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/935/GCA_002018935.1_ASM201893v1	-	499
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.55304	57.2	-	NPZF01	96	5693	5378	8/11/17	8/15/17	Contig	JCVI	SAMN07450619	GCA_002246045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/045/GCA_002246045.1_ASM224604v1	-	KPCTRPRTH05
Klebsiella pneumoniae	573	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.71404	57	-	NPZG01	86	5780	5475	8/11/17	8/15/17	Contig	JCVI	SAMN07450618	GCA_002246075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/075/GCA_002246075.1_ASM224607v1	-	ECCTRSRTH01
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	3.74908	39.5	-	MWPL01	585	3658	3392	3/6/17	3/8/17	Contig	University of Sao Paulo	SAMN06446009	GCA_002018965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/965/GCA_002018965.1_ASM201896v1	-	502
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.59715	66.2	-	FRJI01	217	6361	6091	12/9/16	3/20/17	Contig	DTU	SAMEA2357330	GCA_900144925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/925/GCA_900144925.1_150	-	-
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.11726	39.7	-	CMAS01	57	2352	2145	3/21/15	3/4/17	Contig	SC	SAMEA1028743	GCA_001171485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/485/GCA_001171485.1_7004_6_28	-	SMRU2836
Escherichia coli	562	PRJNA277539	277539	Proteobacteria	Gammaproteobacteria	5.06481	50.6	-	LECO01	98	5238	4950	10/9/15	2/24/17	Scaffold	University of Alberta	SAMN03393390	GCA_001309595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/595/GCA_001309595.1_ASM130959v1	26441869	PARC444
Mycobacterium tuberculosis XTB13-082	1427178	PRJNA229571	229571	Terrabacteria group	Actinobacteria	4.41889	65.6	-	JLMI01	2	4302	4104	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419534	GCA_000679895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/895/GCA_000679895.1_Myco_tube_XTB13-082_V1	-	XTB13-082
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.74034	52.1	-	LHEM01	48	4832	4597	8/5/15	2/28/17	Contig	FDA	SAMN03894091	GCA_001240705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/705/GCA_001240705.1_Salmonella_enterica_CVM_N43482_v1.0	-	CVM N43482
Staphylococcus aureus M0550	1388364	PRJNA216535	216535	Terrabacteria group	Firmicutes	2.82671	32.8	-	JCIF01	35	2951	2773	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325488	GCA_000557345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/345/GCA_000557345.1_Stap_aure_M0550_V1	-	M0550
Staphylococcus aureus M0552	1388365	PRJNA216536	216536	Terrabacteria group	Firmicutes	2.84663	32.7	-	JCIG01	62	2992	2797	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325489	GCA_000557365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/365/GCA_000557365.1_Stap_aure_M0552_V1	-	M0552
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.76661	52	-	LHEN01	77	4805	4530	8/5/15	2/28/17	Contig	FDA	SAMN03894092	GCA_001240725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/725/GCA_001240725.1_Salmonella_enterica_CVM_N43820_v1.0	-	CVM N43820
Mycobacterium tuberculosis XTB13-083	1427179	PRJNA229572	229572	Terrabacteria group	Actinobacteria	4.44274	65.4	-	JLMH01	8	4320	4114	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419535	GCA_000679915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/915/GCA_000679915.1_Myco_tube_XTB13-083_V1	-	XTB13-083
Escherichia coli	562	PRJNA277539	277539	Proteobacteria	Gammaproteobacteria	5.26461	50.5	-	LECL01	146	5442	5117	10/9/15	2/24/17	Scaffold	University of Alberta	SAMN03393392	GCA_001309615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/615/GCA_001309615.1_ASM130961v1	26441869	PARC450
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.1269	39.6	-	COFY02	174	2328	2104	3/23/15	3/11/17	Contig	SC	SAMEA1463029	GCA_001171585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/585/GCA_001171585.2_7622_5_96	-	ND6109
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.59703	66.2	-	FRJJ01	234	6377	6093	12/9/16	3/20/17	Contig	DTU	SAMEA2357331	GCA_900144935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/935/GCA_900144935.1_151	-	-
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	3.87594	39.3	-	MWPM01	512	3773	3515	3/6/17	3/8/17	Contig	University of Sao Paulo	SAMN06446010	GCA_002018995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/995/GCA_002018995.1_ASM201899v1	-	891
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.48996	57.2	-	NPZK01	92	5526	5253	8/11/17	8/15/17	Contig	JCVI	SAMN07450573	GCA_002246125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/125/GCA_002246125.1_ASM224612v1	-	KPCRETH16
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.44411	57.2	-	NPZL01	90	5469	5184	8/11/17	8/15/17	Contig	JCVI	SAMN07450572	GCA_002246155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/155/GCA_002246155.1_ASM224615v1	-	ECCRETH03
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	3.80991	39.5	-	MWPN01	819	3713	3432	3/6/17	3/8/17	Contig	University of Sao Paulo	SAMN06446011	GCA_002019005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/005/GCA_002019005.1_ASM201900v1	-	895
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.5617	66.2	-	FRJU01	366	6434	6044	12/9/16	3/20/17	Contig	DTU	SAMEA2357336	GCA_900144945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/945/GCA_900144945.1_155	-	-
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.13139	39.7	-	CMTH01	70	2293	1988	3/23/15	3/15/17	Contig	SC	SAMEA1022906	GCA_001171625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/625/GCA_001171625.1_5737_2_3	-	378
Escherichia coli	562	PRJNA277539	277539	Proteobacteria	Gammaproteobacteria	5.46629	50.5	-	LECM01	263	5942	5459	10/9/15	2/24/17	Scaffold	University of Alberta	SAMN03393402	GCA_001309635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/635/GCA_001309635.1_ASM130963v1	26441869	May-45
Mycobacterium tuberculosis XTB13-084	1427180	PRJNA229573	229573	Terrabacteria group	Actinobacteria	4.41088	65.5	-	JLMG01	5	4303	4097	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419536	GCA_000679935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/935/GCA_000679935.1_Myco_tube_XTB13-084_V1	-	XTB13-084
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.6697	52.2	-	LHEO01	59	4724	4498	8/5/15	2/28/17	Contig	FDA	SAMN03894093	GCA_001240735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/735/GCA_001240735.1_Salmonella_enterica_CVM_N43821_v1.0	-	CVM N43821
Staphylococcus aureus M0554	1388366	PRJNA216537	216537	Terrabacteria group	Firmicutes	2.91705	32.9	-	JCIH01	70	3131	2935	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325490	GCA_000557385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/385/GCA_000557385.1_Stap_aure_M0554_V1	-	M0554
Staphylococcus aureus M0555	1388367	PRJNA216538	216538	Terrabacteria group	Firmicutes	2.89343	32.9	-	JCII01	53	3045	2866	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325491	GCA_000557405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/405/GCA_000557405.1_Stap_aure_M0555_V1	-	M0555
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.84353	52.1	-	LHEP01	115	4972	4729	8/5/15	2/28/17	Contig	FDA	SAMN03894094	GCA_001240785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/785/GCA_001240785.1_Salmonella_enterica_CVM_N43822_v1.0	-	CVM N43822
Mycobacterium tuberculosis XTB13-086	1427181	PRJNA229574	229574	Terrabacteria group	Actinobacteria	4.38273	65.5	-	JLMF01	5	4269	4098	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419537	GCA_000679955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/955/GCA_000679955.1_Myco_tube_XTB13-086_V1	-	XTB13-086
Escherichia coli	562	PRJNA277539	277539	Proteobacteria	Gammaproteobacteria	5.53614	50.6	-	LECN01	191	5874	5456	10/9/15	2/24/17	Scaffold	University of Alberta	SAMN03393403	GCA_001309645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/645/GCA_001309645.1_ASM130964v1	26441869	09-0523
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.07256	39.7	-	CMJO01	67	2283	2085	3/22/15	3/4/17	Contig	SC	SAMEA1026100	GCA_001171685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/685/GCA_001171685.1_7038_8_42	-	SMRU2250
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.58561	66.2	-	FRJL01	272	6389	6079	12/9/16	3/20/17	Contig	DTU	SAMEA2357332	GCA_900144955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/955/GCA_900144955.1_152	-	-
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	3.94265	39.2	-	MWPO01	364	3845	3595	3/6/17	3/8/17	Contig	University of Sao Paulo	SAMN06446012	GCA_002019025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/025/GCA_002019025.1_ASM201902v1	-	923
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.65692	57	-	NPZS01	85	5744	5471	8/11/17	8/15/17	Contig	JCVI	SAMN07450565	GCA_002246235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/235/GCA_002246235.1_ASM224623v1	-	KPCRETH20
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.65482	57	-	NPZQ01	89	5740	5470	8/11/17	8/15/17	Contig	JCVI	SAMN07450567	GCA_002246245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/245/GCA_002246245.1_ASM224624v1	-	KPCRETH18
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	3.95347	39.3	-	MWPP01	576	3874	3603	3/6/17	3/8/17	Contig	University of Sao Paulo	SAMN06446013	GCA_002019035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/019/035/GCA_002019035.1_ASM201903v1	-	991
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.59325	66.2	-	FRJS01	240	6376	6092	12/9/16	3/20/17	Contig	DTU	SAMEA2357334	GCA_900144965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/965/GCA_900144965.1_153	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07602	39.6	-	CNUE02	178	2240	2029	3/23/15	3/11/17	Contig	SC	SAMEA1032642	GCA_001171725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/725/GCA_001171725.2_6999_5_5	-	153438
Escherichia coli	562	PRJNA277539	277539	Proteobacteria	Gammaproteobacteria	5.23057	50.6	-	LECG01	158	5550	5206	10/9/15	2/24/17	Scaffold	University of Alberta	SAMN03393391	GCA_001309675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/675/GCA_001309675.1_ASM130967v1	26441869	PARC445
Mycobacterium tuberculosis XTB13-088	1427182	PRJNA229575	229575	Terrabacteria group	Actinobacteria	4.42023	65.6	-	JLME01	2	4302	4105	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419538	GCA_000679975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/975/GCA_000679975.1_Myco_tube_XTB13-088_V1	-	XTB13-088
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.97341	52.1	-	LHER01	79	5106	4859	8/5/15	2/28/17	Contig	FDA	SAMN03894096	GCA_001240805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/805/GCA_001240805.1_Salmonella_enterica_CVM_N43824_v1.0	-	CVM N43824
Staphylococcus aureus M0556	1388368	PRJNA216539	216539	Terrabacteria group	Firmicutes	2.87656	32.8	-	JCIJ01	53	3020	2853	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325492	GCA_000557425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/425/GCA_000557425.1_Stap_aure_M0556_V1	-	M0556
Staphylococcus aureus M0557	1388369	PRJNA216540	216540	Terrabacteria group	Firmicutes	2.9156	32.8	-	JCIK01	80	3091	2909	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325493	GCA_000557445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/445/GCA_000557445.1_Stap_aure_M0557_V1	-	M0557
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.93407	52.1	-	LHEQ01	96	5066	4814	8/5/15	2/28/17	Contig	FDA	SAMN03894095	GCA_001240825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/825/GCA_001240825.1_Salmonella_enterica_CVM_N43823_v1.0	-	CVM N43823
Mycobacterium tuberculosis XTB13-089	1427183	PRJNA229576	229576	Terrabacteria group	Actinobacteria	4.39977	65.5	-	JLMD01	8	4285	4114	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419539	GCA_000679995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/679/995/GCA_000679995.1_Myco_tube_XTB13-089_V1	-	XTB13-089
Escherichia coli	562	PRJNA277539	277539	Proteobacteria	Gammaproteobacteria	5.36748	50.4	-	LECF01	218	5772	5274	10/9/15	2/24/17	Scaffold	University of Alberta	SAMN03393404	GCA_001309685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/685/GCA_001309685.1_ASM130968v1	26441869	338
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.02653	39.7	-	CMCG01	67	2229	2026	3/21/15	3/4/17	Contig	SC	SAMEA1029200	GCA_001171785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/785/GCA_001171785.1_7004_7_69	-	SMRU2901
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.58783	66.2	-	FRJP01	293	6402	6077	12/9/16	3/20/17	Contig	DTU	SAMEA2357335	GCA_900144975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/975/GCA_900144975.1_154	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.08923	38.9	-	MWVO01	69	3984	3837	3/15/17	3/17/17	Contig	JCVI	SAMN06461788	GCA_002028445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/445/GCA_002028445.1_ASM202844v1	-	ABUH339
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.61965	57	-	NPZU01	109	5767	5461	8/11/17	8/15/17	Contig	JCVI	SAMN07450563	GCA_002246275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/275/GCA_002246275.1_ASM224627v1	-	KPCRETH22
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.61089	57	-	NPZV01	86	5732	5440	8/11/17	8/15/17	Contig	JCVI	SAMN07450562	GCA_002246285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/285/GCA_002246285.1_ASM224628v1	-	KPCRETH23
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.1677	39	-	MWVN01	86	4084	3931	3/15/17	3/17/17	Contig	JCVI	SAMN06461789	GCA_002028475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/475/GCA_002028475.1_ASM202847v1	-	ABUH337
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.59965	66.2	-	FRJM01	127	6305	6100	12/9/16	3/20/17	Contig	DTU	SAMEA2357337	GCA_900144985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/985/GCA_900144985.1_156	-	-
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11963	40.1	-	CKQD01	22	2123	1951	3/21/15	3/10/17	Contig	SC	SAMEA1024553	GCA_001171885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/885/GCA_001171885.1_6680_6_10	-	SMRU946
Escherichia coli	562	PRJNA277539	277539	Proteobacteria	Gammaproteobacteria	5.56329	50.3	-	LECJ01	200	6004	5556	10/9/15	2/24/17	Scaffold	University of Alberta	SAMN03393406	GCA_001309715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/715/GCA_001309715.1_ASM130971v1	26441869	PARC447
Mycobacterium tuberculosis XTB13-091	1427185	PRJNA229578	229578	Terrabacteria group	Actinobacteria	4.43745	65.6	-	JLMC01	20	4325	4115	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419541	GCA_000680015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/015/GCA_000680015.1_Myco_tube_XTB13-091_V1	-	XTB13-091
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.79753	52.1	-	LHES01	58	4920	4679	8/5/15	2/28/17	Contig	FDA	SAMN03894098	GCA_001240835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/835/GCA_001240835.1_Salmonella_enterica_CVM_N43826_v1.0	-	CVM N43826
Staphylococcus aureus M0558	1388370	PRJNA216541	216541	Terrabacteria group	Firmicutes	2.84183	32.9	-	JCIL01	41	2964	2783	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325494	GCA_000557465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/465/GCA_000557465.1_Stap_aure_M0558_V1	-	M0558
Staphylococcus aureus M0559	1388371	PRJNA216542	216542	Terrabacteria group	Firmicutes	2.924	32.8	-	JCIM01	72	3116	2927	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325495	GCA_000557485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/485/GCA_000557485.1_Stap_aure_M0559_V1	-	M0559
Salmonella enterica subsp. enterica serovar Agona	58095	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.76902	52	-	LHET01	73	4828	4588	8/5/15	2/28/17	Contig	FDA	SAMN03894099	GCA_001240875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/875/GCA_001240875.1_Salmonella_enterica_CVM_N43827_v1.0	-	CVM N43827
Mycobacterium tuberculosis XTB13-092	1427186	PRJNA229579	229579	Terrabacteria group	Actinobacteria	4.40993	65.6	-	JLMB01	6	4292	4100	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419542	GCA_000680035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/035/GCA_000680035.1_Myco_tube_XTB13-092_V1	-	XTB13-092
Escherichia coli	562	PRJNA277539	277539	Proteobacteria	Gammaproteobacteria	5.38917	50.6	-	LECK01	165	5652	5217	10/9/15	2/24/17	Scaffold	University of Alberta	SAMN03393408	GCA_001309735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/735/GCA_001309735.1_ASM130973v1	26441869	09-0525
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.13717	39.5	-	CMIS01	62	2351	2139	3/22/15	3/11/17	Contig	SC	SAMEA1029419	GCA_001171905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/905/GCA_001171905.1_7038_7_21	-	SMRU3021
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.60303	66.2	-	FRJO01	132	6317	6099	12/9/16	3/20/17	Contig	DTU	SAMEA2357338	GCA_900144995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/995/GCA_900144995.1_157	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.95391	39.1	-	MWVQ01	86	3832	3698	3/15/17	3/17/17	Contig	JCVI	SAMN06461786	GCA_002028485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/485/GCA_002028485.1_ASM202848v1	-	ABUH343
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.61457	57.1	-	NPZX01	77	5732	5432	8/11/17	8/15/17	Contig	JCVI	SAMN07450560	GCA_002246315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/315/GCA_002246315.1_ASM224631v1	-	KPCRETH25
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.56448	57.2	-	NPZW01	85	5686	5391	8/11/17	8/15/17	Contig	JCVI	SAMN07450561	GCA_002246325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/325/GCA_002246325.1_ASM224632v1	-	KPCRETH24
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.05422	38.9	-	MWVP01	71	3943	3805	3/15/17	3/17/17	Contig	JCVI	SAMN06461787	GCA_002028535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/535/GCA_002028535.1_ASM202853v1	-	ABUH341
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.60935	66.2	-	FRJN01	135	6316	6100	12/9/16	3/20/17	Contig	DTU	SAMEA2357339	GCA_900145005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/005/GCA_900145005.1_158	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07134	39.6	-	CNUJ02	161	2236	2017	3/23/15	3/11/17	Contig	SC	SAMEA1032552	GCA_001171925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/925/GCA_001171925.2_6999_6_1	-	223832
Escherichia coli	562	PRJNA277539	277539	Proteobacteria	Gammaproteobacteria	5.38528	50.7	-	LECH01	173	5684	5321	10/9/15	2/24/17	Scaffold	University of Alberta	SAMN03393405	GCA_001309755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/755/GCA_001309755.1_ASM130975v1	26441869	Nov-88
Mycobacterium tuberculosis XTB13-093	1427187	PRJNA229580	229580	Terrabacteria group	Actinobacteria	4.43298	65.5	-	JLMA01	2	4301	4101	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419543	GCA_000680055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/055/GCA_000680055.1_Myco_tube_XTB13-093_V1	-	XTB13-093
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.71887	52.2	-	LHEU01	55	4801	4577	8/5/15	2/28/17	Contig	FDA	SAMN03894100	GCA_001240885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/885/GCA_001240885.1_Salmonella_enterica_CVM_N43828_v1.0	-	CVM N43828
Staphylococcus aureus M0563	1388373	PRJNA216544	216544	Terrabacteria group	Firmicutes	2.90658	32.7	-	JCIN01	77	3097	2951	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325497	GCA_000557505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/505/GCA_000557505.1_Stap_aure_M0563_V1	-	M0563
Staphylococcus aureus M0564	1388374	PRJNA216545	216545	Terrabacteria group	Firmicutes	2.92692	32.7	-	JCIO01	87	3123	2969	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325498	GCA_000557525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/525/GCA_000557525.1_Stap_aure_M0564_V1	-	M0564
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.98824	52.1	-	LHEV01	86	5092	4846	8/5/15	2/28/17	Contig	FDA	SAMN03894101	GCA_001240925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/925/GCA_001240925.1_Salmonella_enterica_CVM_N43829-R_v1.0	-	CVM N43829
Mycobacterium tuberculosis XTB13-094	1427188	PRJNA229581	229581	Terrabacteria group	Actinobacteria	4.42102	65.6	-	JLLZ01	6	4304	4107	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419544	GCA_000680075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/075/GCA_000680075.1_Myco_tube_XTB13-094_V1	-	XTB13-094
Escherichia coli	562	PRJNA277539	277539	Proteobacteria	Gammaproteobacteria	5.1144	50.5	-	LECI01	185	5465	4989	10/9/15	2/24/17	Scaffold	University of Alberta	SAMN03393407	GCA_001309775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/775/GCA_001309775.1_ASM130977v1	26441869	583
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.02995	39.7	-	CPLZ01	72	2210	2027	3/23/15	3/10/17	Contig	SC	SAMEA682365	GCA_001171965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/965/GCA_001171965.1_5366_7_2	-	08B10227
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.5994	66.2	-	FRJT01	156	6322	6100	12/9/16	3/20/17	Contig	DTU	SAMEA2357340	GCA_900145015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/015/GCA_900145015.1_159	-	-
Acinetobacter baumannii	470	PRJNA316800	316800	Proteobacteria	Gammaproteobacteria	4.00085	38.9	-	LVYA01	132	3925	3759	4/10/17	4/13/17	Contig	Chinese National Human Genome Center at Shanghai	SAMN04601187	GCA_002085505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/505/GCA_002085505.1_ASM208550v1	27594850	AB1845
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.48652	57.2	-	NPZZ01	91	5523	5243	8/11/17	8/15/17	Contig	JCVI	SAMN07450558	GCA_002246355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/355/GCA_002246355.1_ASM224635v1	-	KPCRETH27
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.63151	57.1	-	NQAA01	86	5747	5455	8/11/17	8/15/17	Contig	JCVI	SAMN07450557	GCA_002246365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/365/GCA_002246365.1_ASM224636v1	-	KPCRETH28
Acinetobacter baumannii	470	PRJNA339425	339425	Proteobacteria	Gammaproteobacteria	3.77725	39	-	MDTR01	54	3736	3570	5/8/17	5/10/17	Contig	Hospital Universitario La Paz	SAMN05590454	GCA_002119275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/275/GCA_002119275.1_ASM211927v1	28438568	80
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.59683	66.2	-	FRJQ01	203	6360	6093	12/9/16	3/20/17	Contig	DTU	SAMEA2357342	GCA_900145025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/025/GCA_900145025.1_160	-	-
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.11998	39.7	-	CNAE01	68	2254	1961	3/22/15	3/10/17	Contig	SC	SAMEA1022903	GCA_001172025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/025/GCA_001172025.1_6930_7_17	-	209
Escherichia coli	562	PRJNA277539	277539	Proteobacteria	Gammaproteobacteria	5.26862	50.5	-	LDZZ01	213	5598	5114	10/9/15	2/24/17	Scaffold	University of Alberta	SAMN03393409	GCA_001309805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/805/GCA_001309805.1_ASM130980v1	26441869	Mar-32
Mycobacterium tuberculosis XTB13-095	1427189	PRJNA229582	229582	Terrabacteria group	Actinobacteria	4.41129	65.6	-	JLLY01	8	4298	4101	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419545	GCA_000680095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/095/GCA_000680095.1_Myco_tube_XTB13-095_V1	-	XTB13-095
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.85185	52	-	LHEW01	87	4977	4729	8/5/15	2/28/17	Contig	FDA	SAMN03894102	GCA_001240935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/935/GCA_001240935.1_Salmonella_enterica_CVM_N43830-R_v1.0	-	CVM N43830
Staphylococcus aureus M0566	1388375	PRJNA216546	216546	Terrabacteria group	Firmicutes	2.84444	32.8	-	JCIP01	42	2991	2831	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325499	GCA_000557545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/545/GCA_000557545.1_Stap_aure_M0566_V1	-	M0566
Staphylococcus aureus M0567	1388376	PRJNA216547	216547	Terrabacteria group	Firmicutes	2.90296	32.8	-	JCIQ01	74	3085	2938	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325500	GCA_000557565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/565/GCA_000557565.1_Stap_aure_M0567_V1	-	M0567
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.0582	52	-	LHEX01	87	5202	4939	8/5/15	2/28/17	Contig	FDA	SAMN03894103	GCA_001240965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/965/GCA_001240965.1_Salmonella_enterica_CVM_N43831_v1.0	-	CVM N43831
Mycobacterium tuberculosis XTB13-096	1427190	PRJNA229583	229583	Terrabacteria group	Actinobacteria	4.40953	65.6	-	JLLX01	5	4287	4123	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419546	GCA_000680115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/115/GCA_000680115.1_Myco_tube_XTB13-096_V1	-	XTB13-096
Escherichia coli	562	PRJNA277539	277539	Proteobacteria	Gammaproteobacteria	5.36948	50.5	-	LEAB01	210	5706	5214	10/9/15	2/24/17	Scaffold	University of Alberta	SAMN03393411	GCA_001309815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/815/GCA_001309815.1_ASM130981v1	26441869	Mar-30
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05871	39.6	-	CNOZ02	109	2248	2030	3/23/15	3/11/17	Contig	SC	SAMEA1032572	GCA_001172085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/085/GCA_001172085.2_6930_8_23	-	R34-3029
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.58806	66.2	-	FRJR01	176	6331	6092	12/9/16	3/20/17	Contig	DTU	SAMEA2357343	GCA_900145035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/035/GCA_900145035.1_161	-	-
Acinetobacter baumannii	470	PRJNA339429	339429	Proteobacteria	Gammaproteobacteria	3.78662	39	-	MDTS01	64	3748	3576	5/8/17	5/10/17	Contig	Hospital Universitario La Paz	SAMN05590456	GCA_002119285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/285/GCA_002119285.1_ASM211928v1	28438568	428
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.74735	56.8	-	NQAC01	103	5765	5495	8/11/17	8/15/17	Contig	JCVI	SAMN07450555	GCA_002246395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/395/GCA_002246395.1_ASM224639v1	-	KPCRETH30
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.74763	56.8	-	NQAB01	107	5781	5506	8/11/17	8/15/17	Contig	JCVI	SAMN07450556	GCA_002246415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/415/GCA_002246415.1_ASM224641v1	-	KPCRETH29
Acinetobacter baumannii	470	PRJNA339434	339434	Proteobacteria	Gammaproteobacteria	3.78252	39	-	MDTT01	55	3750	3570	5/8/17	5/10/17	Contig	Hospital Universitario La Paz	SAMN05590464	GCA_002119295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/295/GCA_002119295.1_ASM211929v1	28438568	314
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.60414	66.2	-	FRJY01	129	6309	6098	12/9/16	3/20/17	Contig	DTU	SAMEA2357345	GCA_900145045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/045/GCA_900145045.1_162	-	-
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.13989	39.7	-	CLUH01	87	2316	2081	3/21/15	3/10/17	Contig	SC	SAMEA1025772	GCA_001172185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/185/GCA_001172185.1_6983_2_13	-	SMRU2221
Escherichia coli	562	PRJNA277539	277539	Proteobacteria	Gammaproteobacteria	5.40707	50.6	-	LEAA01	221	5807	5318	10/9/15	2/24/17	Scaffold	University of Alberta	SAMN03393410	GCA_001309825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/825/GCA_001309825.1_ASM130982v1	26441869	Mar-64
Mycobacterium tuberculosis XTB13-097	1427191	PRJNA229584	229584	Terrabacteria group	Actinobacteria	4.41969	65.6	-	JLLW01	2	4302	4107	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419547	GCA_000680135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/135/GCA_000680135.1_Myco_tube_XTB13-097_V1	-	XTB13-097
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.94909	52.1	-	LHEY01	86	5072	4834	8/5/15	2/28/17	Contig	FDA	SAMN03894104	GCA_001240975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/975/GCA_001240975.1_Salmonella_enterica_CVM_N43832_v1.0	-	CVM N43832
Staphylococcus aureus M0568	1388377	PRJNA216548	216548	Terrabacteria group	Firmicutes	2.90782	32.9	-	JCIR01	64	3089	2905	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325501	GCA_000557585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/585/GCA_000557585.1_Stap_aure_M0568_V1	-	M0568
Staphylococcus aureus M0569	1388378	PRJNA216549	216549	Terrabacteria group	Firmicutes	2.92098	32.8	-	JCIS01	46	3091	2898	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325502	GCA_000557605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/605/GCA_000557605.1_Stap_aure_M0569_V1	-	M0569
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91398	52	-	LHEZ01	72	4995	4688	8/5/15	2/28/17	Contig	FDA	SAMN03894107	GCA_001241025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/025/GCA_001241025.1_Salmonella_enterica_CVM_N43835_v1.0	-	CVM N43835
Mycobacterium tuberculosis XTB13-098	1427192	PRJNA229585	229585	Terrabacteria group	Actinobacteria	4.42104	65.6	-	JLLV01	5	4303	4102	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419548	GCA_000680155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/155/GCA_000680155.1_Myco_tube_XTB13-098_V1	-	XTB13-098
Escherichia coli	562	PRJNA277539	277539	Proteobacteria	Gammaproteobacteria	5.42894	50.6	-	LEAC01	181	5773	5241	10/9/15	2/24/17	Scaffold	University of Alberta	SAMN03393413	GCA_001309835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/835/GCA_001309835.1_ASM130983v1	26441869	PARC449
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.02659	39.6	-	CKKR01	58	2250	1996	3/21/15	3/10/17	Contig	SC	SAMEA1024088	GCA_001172225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/225/GCA_001172225.1_6631_7_17	-	9V
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.60525	66.2	-	FRJZ01	130	6308	6090	12/9/16	3/20/17	Contig	DTU	SAMEA2357346	GCA_900145055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/055/GCA_900145055.1_163	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.84793	39	-	NGBU01	90	3744	3573	5/15/17	5/23/17	Contig	JCVI	SAMN06837745	GCA_002136595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/595/GCA_002136595.1_ASM213659v1	-	PR304
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.5621	57.1	-	NQAD01	97	5611	5323	8/11/17	8/15/17	Contig	JCVI	SAMN07450553	GCA_002246435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/435/GCA_002246435.1_ASM224643v1	-	KPCRETH32
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.49209	57.1	-	NQAE01	88	5535	5254	8/11/17	8/15/17	Contig	JCVI	SAMN07450552	GCA_002246455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/455/GCA_002246455.1_ASM224645v1	-	KPCRETH33
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.98321	38.9	-	NGBW01	64	3890	3732	5/15/17	5/23/17	Contig	JCVI	SAMN06837743	GCA_002136605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/605/GCA_002136605.1_ASM213660v1	-	PR306
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.59628	66.2	-	FRKA01	142	6309	6084	12/9/16	3/20/17	Contig	DTU	SAMEA2357348	GCA_900145065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/065/GCA_900145065.1_164	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05966	39.7	-	CNXS02	299	2194	2024	3/23/15	3/11/17	Contig	SC	SAMEA1032556	GCA_001172305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/305/GCA_001172305.2_7001_3_7	-	R34-3141
Escherichia coli	562	PRJNA277539	277539	Proteobacteria	Gammaproteobacteria	5.57149	50.3	-	LEAE01	225	5996	5518	10/9/15	2/24/17	Scaffold	University of Alberta	SAMN03393398	GCA_001309885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/885/GCA_001309885.1_ASM130988v1	26441869	CO6CE900
Mycobacterium tuberculosis XTB13-100	1427193	PRJNA229586	229586	Terrabacteria group	Actinobacteria	4.38262	65.6	-	JLLU01	63	4308	4114	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419549	GCA_000680175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/175/GCA_000680175.1_Myco_tube_XTB13-100_V1	-	XTB13-100
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.75874	52.2	-	LHFA01	63	4839	4600	8/5/15	2/28/17	Contig	FDA	SAMN03894108	GCA_001241055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/055/GCA_001241055.1_Salmonella_enterica_CVM_N43836_v1.0	-	CVM N43836
Staphylococcus aureus M0572	1388379	PRJNA216550	216550	Terrabacteria group	Firmicutes	2.88349	32.8	-	JCIT01	44	3037	2877	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325503	GCA_000557625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/625/GCA_000557625.1_Stap_aure_M0572_V1	-	M0572
Staphylococcus aureus M0573	1388380	PRJNA216551	216551	Terrabacteria group	Firmicutes	2.90318	32.9	-	JCIU01	71	3106	2923	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325504	GCA_000557645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/645/GCA_000557645.1_Stap_aure_M0573_V1	-	M0573
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.94961	52.1	-	LHFB01	152	5066	4799	8/5/15	2/28/17	Contig	FDA	SAMN03894109	GCA_001241075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/075/GCA_001241075.1_Salmonella_enterica_CVM_N44692_v1.0	-	CVM N44692
Mycobacterium tuberculosis XTB13-102	1427194	PRJNA229587	229587	Terrabacteria group	Actinobacteria	4.41698	65.6	-	JLLT01	4	4295	4098	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419550	GCA_000680195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/195/GCA_000680195.1_Myco_tube_XTB13-102_V1	-	XTB13-102
Escherichia coli	562	PRJNA277539	277539	Proteobacteria	Gammaproteobacteria	5.50402	50.3	-	LEAF01	205	5929	5476	10/9/15	2/24/17	Scaffold	University of Alberta	SAMN03393395	GCA_001309895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/895/GCA_001309895.1_ASM130989v1	-	CO6CE1353
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08001	39.5	-	CLBZ01	75	2279	2054	3/21/15	3/10/17	Contig	SC	SAMEA1026255	GCA_001172345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/345/GCA_001172345.1_6871_2_1	-	SMRU1825
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.36237	66.3	-	FRKB01	101	6099	5878	12/9/16	3/20/17	Contig	DTU	SAMEA2357349	GCA_900145075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/075/GCA_900145075.1_165	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.99555	39	-	NGBV01	139	3962	3747	5/15/17	5/23/17	Contig	JCVI	SAMN06837744	GCA_002136615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/615/GCA_002136615.1_ASM213661v1	-	PR305
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.49103	57.1	-	NQAF01	90	5530	5244	8/11/17	8/15/17	Contig	JCVI	SAMN07450581	GCA_002246475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/475/GCA_002246475.1_ASM224647v1	-	ECCRETH07
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.63047	57.2	-	NQAL01	87	5750	5459	8/11/17	8/15/17	Contig	JCVI	SAMN07450622	GCA_002246555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/555/GCA_002246555.1_ASM224655v1	-	KPCTRPRTH02
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.96988	39.1	-	NGBX01	58	3826	3668	5/15/17	5/23/17	Contig	JCVI	SAMN06837776	GCA_002136655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/655/GCA_002136655.1_ASM213665v1	-	PR307
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.59519	66.2	-	FRKF01	205	6354	6091	12/9/16	3/20/17	Contig	DTU	SAMEA2357351	GCA_900145085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/085/GCA_900145085.1_167	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00232	39.7	-	CODJ02	133	2152	1951	3/23/15	3/11/17	Contig	SC	SAMEA1463114	GCA_001172365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/365/GCA_001172365.2_7622_4_14	-	LE4021
Escherichia coli	562	PRJNA277539	277539	Proteobacteria	Gammaproteobacteria	5.41004	50.4	-	LEAG01	185	5764	5327	10/9/15	2/24/17	Scaffold	University of Alberta	SAMN03393396	GCA_001309905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/905/GCA_001309905.1_ASM130990v1	26441869	CO6CE1943
Mycobacterium tuberculosis XTB13-103	1427195	PRJNA229588	229588	Terrabacteria group	Actinobacteria	4.38851	65.6	-	JLLS01	4	4264	4099	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419551	GCA_000680215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/215/GCA_000680215.1_Myco_tube_XTB13-103_V1	-	XTB13-103
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.94077	51.9	-	LHFD01	90	5035	4781	8/5/15	2/28/17	Contig	FDA	SAMN03894112	GCA_001241105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/105/GCA_001241105.1_Salmonella_enterica_CVM_N44695-R_v1.0	-	CVM N44695
Staphylococcus aureus M0577	1388381	PRJNA216552	216552	Terrabacteria group	Firmicutes	2.89763	32.7	-	JCIV01	81	3078	2945	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325505	GCA_000557665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/665/GCA_000557665.1_Stap_aure_M0577_V1	-	M0577
Staphylococcus aureus M0579	1388382	PRJNA216553	216553	Terrabacteria group	Firmicutes	2.89571	32.8	-	JCIW01	69	3079	2902	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325506	GCA_000557685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/685/GCA_000557685.1_Stap_aure_M0579_V1	-	M0579
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.70673	52.2	-	LHFC01	57	4755	4537	8/5/15	2/28/17	Contig	FDA	SAMN03894111	GCA_001241115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/115/GCA_001241115.1_Salmonella_enterica_CVM_N44694_v1.0	-	CVM N44694
Mycobacterium tuberculosis XTB13-104	1427196	PRJNA229589	229589	Terrabacteria group	Actinobacteria	4.41507	65.6	-	JLLR01	6	4284	4120	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419552	GCA_000680235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/235/GCA_000680235.1_Myco_tube_XTB13-104_V1	-	XTB13-104
Escherichia coli	562	PRJNA277539	277539	Proteobacteria	Gammaproteobacteria	5.49402	50.4	-	LEAH01	197	5892	5432	10/9/15	2/24/17	Scaffold	University of Alberta	SAMN03393397	GCA_001309925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/925/GCA_001309925.1_ASM130992v1	26441869	CO6CE2940
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05821	39.6	-	COEA02	141	2226	2020	3/23/15	3/11/17	Contig	SC	SAMEA1463277	GCA_001172505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/505/GCA_001172505.2_7622_4_38	-	LE4124
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.40759	66.4	-	FRKI01	169	6111	5861	12/9/16	3/20/17	Contig	DTU	SAMEA2357350	GCA_900145095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/095/GCA_900145095.1_166	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.96428	39	-	NGBY01	41	3805	3671	5/15/17	5/23/17	Contig	JCVI	SAMN06837775	GCA_002136675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/675/GCA_002136675.1_ASM213667v1	-	PR308
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.68934	57.1	-	NQAT01	118	5840	5511	8/11/17	8/15/17	Contig	JCVI	SAMN07450587	GCA_002246575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/575/GCA_002246575.1_ASM224657v1	-	KPCRETH09
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.65648	57	-	NPZR01	83	5741	5470	8/11/17	8/15/17	Contig	JCVI	SAMN07450566	GCA_002246635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/635/GCA_002246635.1_ASM224663v1	-	KPCRETH19
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.73535	38.9	-	NGCA01	36	3560	3439	5/15/17	5/23/17	Contig	JCVI	SAMN06837773	GCA_002136685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/685/GCA_002136685.1_ASM213668v1	-	PR310
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.5998	66.2	-	FRKG01	114	6295	6094	12/9/16	3/20/17	Contig	DTU	SAMEA2357352	GCA_900145105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/105/GCA_900145105.1_168	-	-
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.07302	39.7	-	CLPO01	43	2285	2064	3/21/15	3/11/17	Contig	SC	SAMEA1028889	GCA_001172525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/525/GCA_001172525.1_6949_3_2	-	SMRU2450
Escherichia coli	562	PRJNA277539	277539	Proteobacteria	Gammaproteobacteria	5.34127	50.4	-	LEAI01	182	5659	5223	10/9/15	2/24/17	Scaffold	University of Alberta	SAMN03393394	GCA_001309965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/965/GCA_001309965.1_ASM130996v1	26441869	CO283
Mycobacterium tuberculosis XTB13-105	1427197	PRJNA229590	229590	Terrabacteria group	Actinobacteria	4.42194	65.5	-	JLLQ01	3	4294	4101	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419553	GCA_000680255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/255/GCA_000680255.1_Myco_tube_XTB13-105_V1	-	XTB13-105
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.86996	52.1	-	LHFE01	55	5002	4760	8/5/15	2/28/17	Contig	FDA	SAMN03894113	GCA_001241155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/155/GCA_001241155.1_Salmonella_enterica_CVM_N44696-R_v1.0	-	CVM N44696
Staphylococcus aureus M0581	1388383	PRJNA216554	216554	Terrabacteria group	Firmicutes	2.87014	32.8	-	JCIX01	49	3004	2857	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325507	GCA_000557705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/705/GCA_000557705.1_Stap_aure_M0581_V1	-	M0581
Staphylococcus aureus M0582	1388384	PRJNA216555	216555	Terrabacteria group	Firmicutes	2.81746	32.8	-	JCIY01	35	2945	2772	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325508	GCA_000557725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/725/GCA_000557725.1_Stap_aure_M0582_V1	-	M0582
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.98935	52	-	LHFF01	84	5121	4877	8/5/15	2/28/17	Contig	FDA	SAMN03894114	GCA_001241165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/165/GCA_001241165.1_Salmonella_enterica_CVM_N44697-R_v1.0	-	CVM N44697
Mycobacterium tuberculosis XTB13-107	1427199	PRJNA229593	229593	Terrabacteria group	Actinobacteria	4.39259	65.5	-	JLLP01	5	4281	4102	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419555	GCA_000680275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/275/GCA_000680275.1_Myco_tube_XTB13-107_V1	-	XTB13-107
Escherichia coli	562	PRJNA277539	277539	Proteobacteria	Gammaproteobacteria	5.47225	50.4	-	LEAD01	194	5871	5416	10/9/15	2/24/17	Scaffold	University of Alberta	SAMN03393393	GCA_001309985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/985/GCA_001309985.1_ASM130998v1	26441869	1935
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.11236	39.6	-	CMVF01	75	2230	2006	3/23/15	3/10/17	Contig	SC	SAMEA1022956	GCA_001172565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/565/GCA_001172565.1_5750_2_12	-	258
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.61022	66.2	-	FRKK01	152	6319	6094	12/9/16	3/20/17	Contig	DTU	SAMEA2357353	GCA_900145115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/115/GCA_900145115.1_169	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.87343	38.9	-	NGBZ01	70	3780	3640	5/15/17	5/23/17	Contig	JCVI	SAMN06837774	GCA_002136705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/705/GCA_002136705.1_ASM213670v1	-	PR309
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.49087	57.2	-	NPZT01	84	5525	5247	8/11/17	8/15/17	Contig	JCVI	SAMN07450564	GCA_002246655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/655/GCA_002246655.1_ASM224665v1	-	KPCRETH21
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.49179	57.1	-	NPZY01	85	5532	5248	8/11/17	8/15/17	Contig	JCVI	SAMN07450559	GCA_002246685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/685/GCA_002246685.1_ASM224668v1	-	KPCRETH26
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.79047	38.9	-	NGCB01	30	3648	3535	5/15/17	5/23/17	Contig	JCVI	SAMN06837772	GCA_002136735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/735/GCA_002136735.1_ASM213673v1	-	PR311
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.60127	66.2	-	FRKN01	129	6303	6095	12/9/16	3/20/17	Contig	DTU	SAMEA2357356	GCA_900145125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/125/GCA_900145125.1_171	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12945	39.6	-	COEI02	186	2317	2100	3/23/15	3/11/17	Contig	SC	SAMEA1463205	GCA_001172605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/605/GCA_001172605.2_7622_4_47	-	MD5029
Escherichia coli	562	PRJNA277539	277539	Proteobacteria	Gammaproteobacteria	5.43981	50.4	-	LEAJ01	189	5807	5373	10/9/15	2/24/17	Scaffold	University of Alberta	SAMN03393399	GCA_001309995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/309/995/GCA_001309995.1_ASM130999v1	26441869	E0122
Mycobacterium tuberculosis XTB13-108	1427200	PRJNA229594	229594	Terrabacteria group	Actinobacteria	4.43396	65.6	-	JLLO01	2	4306	4109	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419556	GCA_000680295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/295/GCA_000680295.1_Myco_tube_XTB13-108_V1	-	XTB13-108
Salmonella enterica subsp. enterica serovar Anatum	58712	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.74396	52.1	-	LHFG01	44	4816	4592	8/5/15	2/28/17	Contig	FDA	SAMN03894115	GCA_001241205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/205/GCA_001241205.1_Salmonella_enterica_CVM_N44698-R_v1.0	-	CVM N44698
Staphylococcus aureus M0583	1388385	PRJNA216556	216556	Terrabacteria group	Firmicutes	2.8565	32.8	-	JCIZ01	40	3012	2836	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325509	GCA_000557745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/745/GCA_000557745.1_Stap_aure_M0583_V1	-	M0583
Staphylococcus aureus M0585	1388386	PRJNA216557	216557	Terrabacteria group	Firmicutes	2.92212	32.8	-	JCJA01	70	3117	2939	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325510	GCA_000557765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/765/GCA_000557765.1_Stap_aure_M0585_V1	-	M0585
Salmonella enterica subsp. enterica serovar Anatum	58712	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.7439	52.2	-	LHFH01	206	4866	4592	8/5/15	2/28/17	Contig	FDA	SAMN03894116	GCA_001241225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/225/GCA_001241225.1_Salmonella_enterica_CVM_N44699-R_v1.0	-	CVM N44699
Mycobacterium tuberculosis XTB13-111	1427203	PRJNA229597	229597	Terrabacteria group	Actinobacteria	4.42767	65.6	-	JLLM01	3	4310	4102	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419559	GCA_000680315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/315/GCA_000680315.1_Myco_tube_XTB13-111_V1	-	XTB13-111
Escherichia coli	562	PRJNA277539	277539	Proteobacteria	Gammaproteobacteria	5.43201	50.4	-	LEAK01	179	5774	5345	10/9/15	2/24/17	Scaffold	University of Alberta	SAMN03393400	GCA_001310005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/005/GCA_001310005.1_ASM131000v1	26441869	LCDC7236
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.1533	39.6	-	CMDC01	53	2317	2025	3/21/15	3/10/17	Contig	SC	SAMEA1028838	GCA_001172645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/645/GCA_001172645.1_7011_3_1	-	SMRU2737
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.59103	66.2	-	FRKQ01	181	6335	6087	12/9/16	3/20/17	Contig	DTU	SAMEA2357355	GCA_900145135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/135/GCA_900145135.1_170	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.05286	38.9	-	NGCC01	92	3985	3839	5/15/17	5/23/17	Contig	JCVI	SAMN06837771	GCA_002136745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/745/GCA_002136745.1_ASM213674v1	-	PR312
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.57525	57.2	-	NQAR01	116	5709	5407	8/11/17	8/15/17	Contig	JCVI	SAMN07450589	GCA_002246695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/695/GCA_002246695.1_ASM224669v1	-	KPCRETH07
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.5583	57.1	-	NQAS01	110	5641	5354	8/11/17	8/15/17	Contig	JCVI	SAMN07450588	GCA_002246705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/705/GCA_002246705.1_ASM224670v1	-	KPCRETH08
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.04756	38.9	-	NGCE01	73	3968	3819	5/15/17	5/23/17	Contig	JCVI	SAMN06837800	GCA_002136775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/775/GCA_002136775.1_ASM213677v1	-	PR351
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.60886	66.2	-	FRKP01	143	6321	6091	12/9/16	3/20/17	Contig	DTU	SAMEA2357357	GCA_900145145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/145/GCA_900145145.1_172	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.01207	39.7	-	CRON01	66	2238	2020	3/22/15	3/11/17	Contig	SC	SAMEA1025369	GCA_001172725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/725/GCA_001172725.1_6755_5_6	-	SMRU1158
Escherichia coli	562	PRJNA298576	298576	Proteobacteria	Gammaproteobacteria	4.77012	50.8	-	LLKU01	91	4883	4599	10/22/15	2/24/17	Scaffold	National Institute of Health Dr Ricardo Jorge	SAMN04160941	GCA_001402805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/402/805/GCA_001402805.1_ASM140280v1	-	INSRA6015
Mycobacterium tuberculosis XTB13-112	1427204	PRJNA229598	229598	Terrabacteria group	Actinobacteria	4.43601	65.5	-	JLLL01	2	4315	4116	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419560	GCA_000680335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/335/GCA_000680335.1_Myco_tube_XTB13-112_V1	-	XTB13-112
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.94562	52.1	-	LHFI01	84	5093	4814	8/5/15	2/28/17	Contig	FDA	SAMN03894117	GCA_001241265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/265/GCA_001241265.1_Salmonella_enterica_CVM_N44700-R_v1.0	-	CVM N44700
Staphylococcus aureus M0587	1388387	PRJNA216558	216558	Terrabacteria group	Firmicutes	2.94217	32.9	-	JCJB01	30	3097	2928	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325511	GCA_000557785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/785/GCA_000557785.1_Stap_aure_M0587_V1	-	M0587
Staphylococcus aureus M0588	1388388	PRJNA216559	216559	Terrabacteria group	Firmicutes	2.89382	32.8	-	JCJC01	46	3058	2891	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325512	GCA_000557805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/805/GCA_000557805.1_Stap_aure_M0588_V1	-	M0588
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.86995	52.1	-	LHFJ01	62	4999	4755	8/5/15	2/28/17	Contig	FDA	SAMN03894118	GCA_001241275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/275/GCA_001241275.1_Salmonella_enterica_CVM_N44701-R_v1.0	-	CVM N44701
Mycobacterium tuberculosis XTB13-113	1427205	PRJNA229599	229599	Terrabacteria group	Actinobacteria	4.42555	65.6	-	JLLK01	2	4299	4106	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419561	GCA_000680355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/355/GCA_000680355.1_Myco_tube_XTB13-113_V1	-	XTB13-113
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.69355	50.9	-	JRRV01	359	4847	4548	10/26/15	2/24/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872753	GCA_001412925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/925/GCA_001412925.1_ASM141292v1	25501822	RU1 LB1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06546	39.5	-	CNSA02	196	2224	2013	3/23/15	3/11/17	Contig	SC	SAMEA1032456	GCA_001172745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/745/GCA_001172745.2_6999_2_5	-	R34-3211
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.46793	66.3	-	FRKR01	120	6198	6017	12/9/16	3/20/17	Contig	DTU	SAMEA2357358	GCA_900145155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/155/GCA_900145155.1_173	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.68379	39	-	NGCF01	101	3576	3345	5/15/17	5/23/17	Contig	JCVI	SAMN06837799	GCA_002136815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/815/GCA_002136815.1_ASM213681v1	-	PR352
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.47698	57.2	-	NQAM01	129	5505	5223	8/11/17	8/15/17	Contig	JCVI	SAMN07450621	GCA_002246765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/765/GCA_002246765.1_ASM224676v1	-	KPCTRPRTH03
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.54283	57.2	-	NQAP01	84	5559	5308	8/11/17	8/15/17	Contig	JCVI	SAMN07450592	GCA_002246785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/785/GCA_002246785.1_ASM224678v1	-	ECCRETH01
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.98334	39.1	-	NGCG01	123	3919	3725	5/15/17	5/23/17	Contig	JCVI	SAMN06837797	GCA_002136825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/825/GCA_002136825.1_ASM213682v1	-	PR353
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.46658	66.3	-	FRKS01	115	6201	6019	12/9/16	3/20/17	Contig	DTU	SAMEA2357359	GCA_900145165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/165/GCA_900145165.1_174	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09319	39.6	-	CRUG01	65	2328	2094	3/23/15	3/10/17	Contig	SC	SAMEA1025463	GCA_001172765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/765/GCA_001172765.1_6805_5_4	-	SMRU1684
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.65272	50.9	-	JRRW01	340	4796	4495	10/26/15	2/24/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872754	GCA_001412955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/955/GCA_001412955.1_ASM141295v1	25501822	RU1 LB2
Mycobacterium tuberculosis XTB13-114	1427206	PRJNA229600	229600	Terrabacteria group	Actinobacteria	4.42635	65.6	-	JLLJ01	2	4309	4109	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419562	GCA_000680375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/375/GCA_000680375.1_Myco_tube_XTB13-114_V1	-	XTB13-114
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.74786	52.1	-	LHFK01	68	4850	4614	8/5/15	2/28/17	Contig	FDA	SAMN03894120	GCA_001241305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/305/GCA_001241305.1_Salmonella_enterica_CVM_N44703_v1.0	-	CVM N44703
Staphylococcus aureus M0589	1388389	PRJNA216560	216560	Terrabacteria group	Firmicutes	2.90808	32.9	-	JCJD01	60	3070	2892	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325513	GCA_000557825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/825/GCA_000557825.1_Stap_aure_M0589_V1	-	M0589
Staphylococcus aureus M0590	1388390	PRJNA216561	216561	Terrabacteria group	Firmicutes	2.85573	32.7	-	JCJE01	67	2998	2801	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325514	GCA_000557845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/845/GCA_000557845.1_Stap_aure_M0590_V1	-	M0590
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.75446	52.3	-	LHFL01	100	4845	4591	8/5/15	2/28/17	Contig	FDA	SAMN03894122	GCA_001241325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/325/GCA_001241325.1_Salmonella_enterica_CVM_N44705_v1.0	-	CVM N44705
Mycobacterium tuberculosis XTB13-115	1427207	PRJNA229601	229601	Terrabacteria group	Actinobacteria	4.38512	65.5	-	JLLI01	9	4257	4083	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419563	GCA_000680395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/395/GCA_000680395.1_Myco_tube_XTB13-115_V1	-	XTB13-115
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.74144	50.9	-	JRRZ01	124	4939	4542	10/26/15	2/24/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872757	GCA_001412975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/975/GCA_001412975.1_ASM141297v1	25501822	RU1 LB5
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.14742	39.5	-	CKSQ01	41	2366	2110	3/21/15	3/6/17	Contig	SC	SAMEA1025630	GCA_001172785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/785/GCA_001172785.1_6807_3_8	-	SMRU1616
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.46488	66.3	-	FRKT01	129	6214	6016	12/9/16	3/20/17	Contig	DTU	SAMEA2357360	GCA_900145175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/175/GCA_900145175.1_175	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.00634	39	-	NGCI01	32	3854	3724	5/15/17	5/23/17	Contig	JCVI	SAMN06837794	GCA_002136855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/855/GCA_002136855.1_ASM213685v1	-	PR355
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.49682	57.2	-	NQAU01	83	5527	5287	8/11/17	8/15/17	Contig	JCVI	SAMN07450586	GCA_002246835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/835/GCA_002246835.1_ASM224683v1	-	KPCRETH10
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.49056	57.2	-	NQAY01	90	5525	5256	8/11/17	8/15/17	Contig	JCVI	SAMN07450575	GCA_002246845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/845/GCA_002246845.1_ASM224684v1	-	KPCRETH14
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.99695	39	-	NGCK01	117	3968	3777	5/15/17	5/23/17	Contig	JCVI	SAMN06837791	GCA_002136885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/885/GCA_002136885.1_ASM213688v1	-	PR357
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.46929	66.3	-	FRKU01	95	6186	6018	12/9/16	3/20/17	Contig	DTU	SAMEA2357361	GCA_900145185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/185/GCA_900145185.1_176	-	-
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05966	39.7	-	CLRE01	65	2265	2061	3/21/15	3/4/17	Contig	SC	SAMEA1028793	GCA_001172825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/825/GCA_001172825.1_6972_2_16	-	SMRU2560
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.70139	50.9	-	JRSD01	250	4834	4527	10/26/15	2/24/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872761	GCA_001412995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/995/GCA_001412995.1_ASM141299v1	25501822	RU1 LB9
Mycobacterium tuberculosis XTB13-116	1427208	PRJNA229602	229602	Terrabacteria group	Actinobacteria	4.42814	65.6	-	JLLH01	7	4306	4108	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419564	GCA_000680415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/415/GCA_000680415.1_Myco_tube_XTB13-116_V1	-	XTB13-116
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.74912	52.1	-	LHFM01	96	4851	4599	8/5/15	2/28/17	Contig	FDA	SAMN03894123	GCA_001241355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/355/GCA_001241355.1_Salmonella_enterica_CVM_N44706-R_v1.0	-	CVM N44706
Staphylococcus aureus M0591	1388391	PRJNA216562	216562	Terrabacteria group	Firmicutes	2.88805	32.8	-	JCJF01	59	3054	2889	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325515	GCA_000557865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/865/GCA_000557865.1_Stap_aure_M0591_V1	-	M0591
Staphylococcus aureus M0592	1388392	PRJNA216563	216563	Terrabacteria group	Firmicutes	2.90868	32.8	-	JCJG01	73	3082	2892	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325516	GCA_000557885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/885/GCA_000557885.1_Stap_aure_M0592_V1	-	M0592
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.18798	51.8	-	LHFN01	315	5386	5055	8/5/15	2/28/17	Contig	FDA	SAMN03894124	GCA_001241365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/365/GCA_001241365.1_Salmonella_enterica_CVM_N44707_v1.0	-	CVM N44707
Mycobacterium tuberculosis XTB13-117	1427209	PRJNA229603	229603	Terrabacteria group	Actinobacteria	4.42033	65.6	-	JLLG01	2	4304	4114	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419565	GCA_000680435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/435/GCA_000680435.1_Myco_tube_XTB13-117_V1	-	XTB13-117
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.74999	50.9	-	JRRJ01	119	4914	4572	10/26/15	2/24/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872741	GCA_001413355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/355/GCA_001413355.1_ASM141335v1	25501822	RU1 MA1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.03999	39.6	-	CNRA02	120	2218	2012	3/23/15	3/5/17	Contig	SC	SAMEA1032738	GCA_001172845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/845/GCA_001172845.2_6999_1_6	-	R34-3189
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.32156	66.5	-	FRKV01	104	6007	5836	12/9/16	3/20/17	Contig	DTU	SAMEA2357363	GCA_900145195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/195/GCA_900145195.1_178	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.789	38.9	-	NGCJ01	37	3652	3515	5/15/17	5/23/17	Contig	JCVI	SAMN06837792	GCA_002136895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/895/GCA_002136895.1_ASM213689v1	-	PR356
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.62996	57.1	-	NQAK01	90	5748	5450	8/11/17	8/15/17	Contig	JCVI	SAMN07450577	GCA_002246875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/875/GCA_002246875.1_ASM224687v1	-	KPCTRPRTH01
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.87173	56.7	-	NQAN01	125	5918	5615	8/11/17	8/15/17	Contig	JCVI	SAMN07450551	GCA_002246895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/895/GCA_002246895.1_ASM224689v1	-	KPCRETH05
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.08853	39	-	NGCL01	88	4030	3862	5/15/17	5/23/17	Contig	JCVI	SAMN06837789	GCA_002136935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/935/GCA_002136935.1_ASM213693v1	-	PR358
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.55717	66.4	-	FRKW01	133	6324	6100	12/9/16	3/20/17	Contig	DTU	SAMEA2357362	GCA_900145205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/205/GCA_900145205.1_177	-	-
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.14776	39.7	-	CMWB01	92	2336	2040	3/22/15	3/6/17	Contig	SC	SAMEA1022807	GCA_001172885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/885/GCA_001172885.1_5756_7_2	-	310
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.73694	50.9	-	JRRM01	74	4990	4539	10/26/15	2/24/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872744	GCA_001413415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/415/GCA_001413415.1_ASM141341v1	25501822	RU1 MA4
Mycobacterium tuberculosis XTB13-119	1427210	PRJNA229604	229604	Terrabacteria group	Actinobacteria	4.4023	65.6	-	JLLF01	5	4272	4097	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419566	GCA_000680455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/455/GCA_000680455.1_Myco_tube_XTB13-119_V1	-	XTB13-119
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.00993	51.9	-	LHFO01	102	5130	4827	8/5/15	2/28/17	Contig	FDA	SAMN03894125	GCA_001241395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/395/GCA_001241395.1_Salmonella_enterica_CVM_N44708_v1.0	-	CVM N44708
Staphylococcus aureus M0593	1388393	PRJNA216564	216564	Terrabacteria group	Firmicutes	2.90906	32.7	-	JCJH01	81	3116	2964	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325517	GCA_000557905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/905/GCA_000557905.1_Stap_aure_M0593_V1	-	M0593
Staphylococcus aureus M0595	1388394	PRJNA216565	216565	Terrabacteria group	Firmicutes	2.88739	32.9	-	JCJI01	52	3054	2887	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325518	GCA_000557925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/925/GCA_000557925.1_Stap_aure_M0595_V1	-	M0595
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91282	52.2	-	LHFP01	157	5029	4767	8/5/15	2/28/17	Contig	FDA	SAMN03894126	GCA_001241425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/425/GCA_001241425.1_Salmonella_enterica_CVM_N44709_v1.0	-	CVM N44709
Mycobacterium tuberculosis XTB13-120	1427211	PRJNA229605	229605	Terrabacteria group	Actinobacteria	4.42727	65.6	-	JLLE01	2	4301	4107	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419567	GCA_000680475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/475/GCA_000680475.1_Myco_tube_XTB13-120_V1	-	XTB13-120
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.7183	50.9	-	JRRN01	77	4926	4516	10/26/15	2/24/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872745	GCA_001413425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/425/GCA_001413425.1_ASM141342v1	25501822	RU1 MA5
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.05819	39.9	-	CRPO01	65	2273	2061	3/23/15	3/4/17	Contig	SC	SAMEA1024809	GCA_001172945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/945/GCA_001172945.1_6775_1_20	-	SMRU836
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.54531	66.4	-	FRKX01	101	6295	6095	12/9/16	3/20/17	Contig	DTU	SAMEA2357364	GCA_900145215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/215/GCA_900145215.1_179	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.96441	38.8	-	NGCN01	75	3856	3650	5/15/17	5/23/17	Contig	JCVI	SAMN06837787	GCA_002136955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/955/GCA_002136955.1_ASM213695v1	-	PR360
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.45082	57.3	-	NQAV01	73	5540	5270	8/11/17	8/15/17	Contig	JCVI	SAMN07450584	GCA_002247365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/365/GCA_002247365.1_ASM224736v1	-	KPCRETH11
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.6035	57.1	-	NQAW01	110	5767	5451	8/11/17	8/15/17	Contig	JCVI	SAMN07450583	GCA_002247375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/375/GCA_002247375.1_ASM224737v1	-	KPCRETH12
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.06757	38.9	-	NGCM01	75	3991	3852	5/15/17	5/23/17	Contig	JCVI	SAMN06837788	GCA_002136965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/965/GCA_002136965.1_ASM213696v1	-	PR359
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.53636	66.4	-	FRKY01	88	6281	6105	12/9/16	3/20/17	Contig	DTU	SAMEA2357368	GCA_900145225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/225/GCA_900145225.1_181	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.11538	39.5	-	CNOJ02	199	2267	2054	3/23/15	3/11/17	Contig	SC	SAMEA1032420	GCA_001173025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/025/GCA_001173025.2_6925_2_84	-	R34-3065
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.7351	50.9	-	JRRP01	76	4955	4538	10/26/15	2/24/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872747	GCA_001413455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/455/GCA_001413455.1_ASM141345v1	25501822	RU1 MA7
Mycobacterium tuberculosis XTB13-121	1427212	PRJNA229606	229606	Terrabacteria group	Actinobacteria	4.40006	65.6	-	JLLD01	4	4295	4119	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419568	GCA_000680495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/495/GCA_000680495.1_Myco_tube_XTB13-121_V1	-	XTB13-121
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.98187	51.8	-	LHFQ01	73	5082	4840	8/5/15	2/28/17	Contig	FDA	SAMN03894127	GCA_001241455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/455/GCA_001241455.1_Salmonella_enterica_CVM_N44710_v1.0	-	CVM N44710
Staphylococcus aureus M0598	1388395	PRJNA216566	216566	Terrabacteria group	Firmicutes	2.90116	32.9	-	JCJJ01	53	3070	2881	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325519	GCA_000557945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/945/GCA_000557945.1_Stap_aure_M0598_V1	-	M0598
Staphylococcus aureus M0599	1388396	PRJNA216567	216567	Terrabacteria group	Firmicutes	2.88701	32.9	-	JCJK01	64	3068	2882	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325520	GCA_000557965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/965/GCA_000557965.1_Stap_aure_M0599_V1	-	M0599
Salmonella enterica subsp. enterica serovar Ohio	117541	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.68741	52.2	-	LHFR01	114	4760	4493	8/5/15	2/28/17	Contig	FDA	SAMN03894128	GCA_001241475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/475/GCA_001241475.1_Salmonella_enterica_CVM_N44711_v1.0	-	CVM N44711
Mycobacterium tuberculosis XTB13-122	1427213	PRJNA229607	229607	Terrabacteria group	Actinobacteria	4.42398	65.6	-	JLLC01	2	4300	4105	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419569	GCA_000680515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/515/GCA_000680515.1_Myco_tube_XTB13-122_V1	-	XTB13-122
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.72549	50.9	-	JRRS01	256	4888	4533	10/26/15	2/24/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872750	GCA_001413485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/485/GCA_001413485.1_ASM141348v1	25501822	RU1 MA10
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09721	39.6	-	COCL02	190	2270	2042	3/23/15	3/11/17	Contig	SC	SAMEA1463099	GCA_001173125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/125/GCA_001173125.2_7622_3_70	-	CH2105
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.54371	66.4	-	FRLA01	115	6300	6095	12/9/16	3/20/17	Contig	DTU	SAMEA2357366	GCA_900145235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/235/GCA_900145235.1_180	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.87446	39.1	-	NGCO01	68	3743	3579	5/15/17	5/23/17	Contig	JCVI	SAMN06837786	GCA_002136995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/995/GCA_002136995.1_ASM213699v1	-	PR361
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.49007	57.1	-	NQAZ01	85	5526	5249	8/11/17	8/15/17	Contig	JCVI	SAMN07450574	GCA_002247385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/385/GCA_002247385.1_ASM224738v1	-	KPCRETH15
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.40945	57.3	-	NQBO01	62	5456	5219	8/11/17	8/15/17	Contig	JCVI	SAMN07450640	GCA_002247625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/625/GCA_002247625.1_ASM224762v1	-	KPSW+01
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.84361	38.9	-	NGCQ01	113	3751	3597	5/15/17	5/23/17	Contig	JCVI	SAMN06837784	GCA_002137035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/035/GCA_002137035.1_ASM213703v1	-	PR363
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.53602	66.4	-	FRKZ01	144	6318	6089	12/9/16	3/20/17	Contig	DTU	SAMEA2357369	GCA_900145245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/245/GCA_900145245.1_182	-	-
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.0779	39.6	-	CLKT01	70	2284	2065	3/21/15	3/4/17	Contig	SC	SAMEA1029443	GCA_001173325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/325/GCA_001173325.1_6938_3_33	-	SMRU3158
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.69908	50.9	-	JRRY01	253	4827	4533	10/26/15	2/24/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872756	GCA_001413565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/565/GCA_001413565.1_ASM141356v1	25501822	RU1 LB4
Mycobacterium tuberculosis XTB13-124	1427215	PRJNA229609	229609	Terrabacteria group	Actinobacteria	4.4159	65.6	-	JLLA01	6	4310	4108	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419571	GCA_000680535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/535/GCA_000680535.1_Myco_tube_XTB13-124_V1	-	XTB13-124
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.0374	52.1	-	LHFS01	85	5215	4963	8/5/15	2/28/17	Contig	FDA	SAMN03894129	GCA_001241505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/505/GCA_001241505.1_Salmonella_enterica_CVM_N44712_v1.0	-	CVM N44712
Staphylococcus aureus M0601	1388398	PRJNA216569	216569	Terrabacteria group	Firmicutes	2.90756	32.9	-	JCJL01	58	3077	2897	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325522	GCA_000557985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/557/985/GCA_000557985.1_Stap_aure_M0601_V1	-	M0601
Staphylococcus aureus M0603	1388399	PRJNA216570	216570	Terrabacteria group	Firmicutes	2.89735	32.8	-	JCJM01	50	3077	2897	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325523	GCA_000558005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/005/GCA_000558005.1_Stap_aure_M0603_V1	-	M0603
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.89221	52.1	-	LHFT01	90	5055	4802	8/5/15	2/28/17	Contig	FDA	SAMN03894130	GCA_001241515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/515/GCA_001241515.1_Salmonella_enterica_CVM_N44713_v1.0	-	CVM N44713
Mycobacterium tuberculosis XTB13-125	1427216	PRJNA229610	229610	Terrabacteria group	Actinobacteria	4.39326	65.5	-	JLKZ01	9	4282	4102	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419572	GCA_000680555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/555/GCA_000680555.1_Myco_tube_XTB13-125_V1	-	XTB13-125
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.69796	50.9	-	JRSA01	380	4856	4545	10/26/15	2/24/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872758	GCA_001413595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/595/GCA_001413595.1_ASM141359v1	25501822	RU1 LB6
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.17009	39.6	-	CODE02	196	2375	2156	3/23/15	3/11/17	Contig	SC	SAMEA1463006	GCA_001173365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/365/GCA_001173365.2_7622_3_96	-	GL3066
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.42957	66.3	-	FRLB01	107	6140	5964	12/9/16	3/20/17	Contig	DTU	SAMEA2357370	GCA_900145255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/255/GCA_900145255.1_183	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.08405	38.9	-	NGCR01	80	4001	3855	5/15/17	5/23/17	Contig	JCVI	SAMN06837783	GCA_002137045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/045/GCA_002137045.1_ASM213704v1	-	PR364
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.52771	57.2	-	NQBP01	100	5559	5293	8/11/17	8/15/17	Contig	JCVI	SAMN07450639	GCA_002247645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/645/GCA_002247645.1_ASM224764v1	-	KPSW+02
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.48094	57.2	-	NQBQ01	109	5562	5283	8/11/17	8/15/17	Contig	JCVI	SAMN07450638	GCA_002247665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/665/GCA_002247665.1_ASM224766v1	-	KPSW+03
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.87575	38.9	-	NGCY01	86	3709	3565	5/15/17	5/23/17	Contig	JCVI	SAMN06837813	GCA_002137185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/185/GCA_002137185.1_ASM213718v1	-	PR371
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.47581	66.3	-	FRLC01	126	6215	6019	12/9/16	3/20/17	Contig	DTU	SAMEA2357371	GCA_900145265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/265/GCA_900145265.1_184	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00093	39.7	-	CODQ02	190	2125	1957	3/23/15	3/11/17	Contig	SC	SAMEA1463127	GCA_001173605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/605/GCA_001173605.2_7622_4_28	-	LE4084
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.72035	50.9	-	JRSB01	240	4861	4530	10/26/15	2/24/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872759	GCA_001413605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/605/GCA_001413605.1_ASM141360v1	25501822	RU1 LB7
Mycobacterium tuberculosis XTB13-126	1427217	PRJNA229611	229611	Terrabacteria group	Actinobacteria	4.40631	65.6	-	JLKY01	3	4284	4096	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419573	GCA_000680575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/575/GCA_000680575.1_Myco_tube_XTB13-126_V1	-	XTB13-126
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.96594	52.2	-	LHFU01	92	5081	4835	8/5/15	2/28/17	Contig	FDA	SAMN03894131	GCA_001241555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/555/GCA_001241555.1_Salmonella_enterica_CVM_N44714_v1.0	-	CVM N44714
Staphylococcus aureus M0604	1388400	PRJNA216571	216571	Terrabacteria group	Firmicutes	2.91143	32.9	-	JCJN01	64	3081	2898	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325524	GCA_000558025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/025/GCA_000558025.1_Stap_aure_M0604_V1	-	M0604
Staphylococcus aureus M0605	1388401	PRJNA216572	216572	Terrabacteria group	Firmicutes	2.92655	32.8	-	JCJO01	60	3087	2888	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325525	GCA_000558045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/045/GCA_000558045.1_Stap_aure_M0605_V1	-	M0605
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.94932	52.1	-	LHFV01	129	5090	4816	8/5/15	2/28/17	Contig	FDA	SAMN03894132	GCA_001241585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/585/GCA_001241585.1_Salmonella_enterica_CVM_N44715_v1.0	-	CVM N44715
Mycobacterium tuberculosis XTB13-127	1427218	PRJNA229612	229612	Terrabacteria group	Actinobacteria	4.41001	65.6	-	JLKX01	8	4292	4090	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419574	GCA_000680595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/595/GCA_000680595.1_Myco_tube_XTB13-127_V1	-	XTB13-127
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.67654	50.9	-	JRSC01	425	4856	4517	10/26/15	2/24/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872760	GCA_001413635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/635/GCA_001413635.1_ASM141363v1	25501822	RU1 LB8
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05725	39.6	-	CNRO02	152	2202	1985	3/23/15	3/11/17	Contig	SC	SAMEA1032537	GCA_001173705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/705/GCA_001173705.2_6999_2_10	-	R34-3216
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.56626	66.2	-	FRLD01	109	6387	6177	12/9/16	3/20/17	Contig	DTU	SAMEA2357372	GCA_900145275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/275/GCA_900145275.1_185	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.87039	38.9	-	NGDA01	48	3698	3576	5/15/17	5/23/17	Contig	JCVI	SAMN06837811	GCA_002137215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/215/GCA_002137215.1_ASM213721v1	-	PR373
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.74351	56.8	-	NQCE01	75	5798	5529	8/11/17	8/15/17	Contig	JCVI	SAMN07450624	GCA_002247865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/865/GCA_002247865.1_ASM224786v1	-	KPH+01
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.57892	57.1	-	NQCF01	84	5629	5362	8/11/17	8/15/17	Contig	JCVI	SAMN07450623	GCA_002247885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/885/GCA_002247885.1_ASM224788v1	-	KPH+02
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.88224	38.9	-	NGCZ01	120	3795	3636	5/15/17	5/23/17	Contig	JCVI	SAMN06837812	GCA_002137225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/225/GCA_002137225.1_ASM213722v1	-	PR372
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.55645	66.3	-	FRLI01	147	6252	6032	12/9/16	3/20/17	Contig	DTU	SAMEA2357374	GCA_900145285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/285/GCA_900145285.1_187	-	-
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12695	39.6	-	CLZD01	87	2357	2127	3/21/15	3/11/17	Contig	SC	SAMEA1029023	GCA_001173725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/725/GCA_001173725.1_6983_8_75	-	SMRU2379
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.70783	50.9	-	JRSE01	265	4866	4549	10/26/15	2/24/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872762	GCA_001413645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/645/GCA_001413645.1_ASM141364v1	25501822	RU1 LB10
Mycobacterium tuberculosis XTB13-128	1427219	PRJNA229613	229613	Terrabacteria group	Actinobacteria	4.40849	65.6	-	JLKW01	7	4291	4121	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419575	GCA_000680615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/615/GCA_000680615.1_Myco_tube_XTB13-128_V1	-	XTB13-128
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.9501	52.1	-	LHFW01	78	5077	4845	8/5/15	2/28/17	Contig	FDA	SAMN03894133	GCA_001241605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/605/GCA_001241605.1_Salmonella_enterica_CVM_N44716_v1.0	-	CVM N44716
Staphylococcus aureus M0607	1388402	PRJNA216573	216573	Terrabacteria group	Firmicutes	2.91255	32.8	-	JCJP01	68	3092	2905	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325526	GCA_000558065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/065/GCA_000558065.1_Stap_aure_M0607_V1	-	M0607
Staphylococcus aureus M0609	1388403	PRJNA216574	216574	Terrabacteria group	Firmicutes	2.8637	32.8	-	JCJQ01	40	3013	2849	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325527	GCA_000558085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/085/GCA_000558085.1_Stap_aure_M0609_V1	-	M0609
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.87657	52.1	-	LHFX01	78	5021	4773	8/5/15	2/28/17	Contig	FDA	SAMN03894137	GCA_001241625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/625/GCA_001241625.1_Salmonella_enterica_CVM_N45392_v1.0	-	CVM N45392
Mycobacterium tuberculosis XTB13-131	1427221	PRJNA229615	229615	Terrabacteria group	Actinobacteria	4.41984	65.6	-	JLKV01	2	4299	4108	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419577	GCA_000680635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/635/GCA_000680635.1_Myco_tube_XTB13-131_V1	-	XTB13-131
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.75173	50.9	-	JRSG01	77	4971	4539	10/26/15	2/24/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872764	GCA_001413685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/685/GCA_001413685.1_ASM141368v1	25501822	RU1 LB12
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.13132	39.5	-	CKCS01	61	2345	2115	3/21/15	3/10/17	Contig	SC	SAMEA1023994	GCA_001173785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/785/GCA_001173785.1_6593_4_9	-	19A
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.56557	66.2	-	FRLE01	121	6398	6169	12/9/16	3/20/17	Contig	DTU	SAMEA2357373	GCA_900145295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/295/GCA_900145295.1_186	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.91471	38.9	-	NGDB01	179	3797	3499	5/15/17	5/23/17	Contig	JCVI	SAMN06837810	GCA_002137255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/255/GCA_002137255.1_ASM213725v1	-	PR374
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.63624	57	-	NQCG01	113	5752	5414	8/11/17	8/15/17	Contig	JCVI	SAMN07450682	GCA_002247895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/895/GCA_002247895.1_ASM224789v1	-	KPH+03
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.73838	56.6	-	NQCT01	71	5833	5564	8/11/17	8/15/17	Contig	JCVI	SAMN07450607	GCA_002248045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/045/GCA_002248045.1_ASM224804v1	-	KPCTRSRTH02
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.7279	39	-	NGDC01	227	3645	3288	5/15/17	5/23/17	Contig	JCVI	SAMN06837809	GCA_002137265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/265/GCA_002137265.1_ASM213726v1	-	PR375
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.56074	66.2	-	FRLF01	175	6432	6169	12/9/16	3/20/17	Contig	DTU	SAMEA2357376	GCA_900145305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/305/GCA_900145305.1_189	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00335	39.7	-	COCI02	152	2146	1961	3/23/15	3/11/17	Contig	SC	SAMEA1463050	GCA_001173845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/845/GCA_001173845.2_7622_3_62	-	CH2074
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.66223	50.9	-	JRSH01	356	4803	4514	10/26/15	2/24/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872777	GCA_001413715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/715/GCA_001413715.1_ASM141371v1	25501822	RU1 BHI1
Mycobacterium tuberculosis XTB13-132	1427222	PRJNA229616	229616	Terrabacteria group	Actinobacteria	4.40021	65.5	-	JLKU01	13	4281	4112	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419578	GCA_000680655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/655/GCA_000680655.1_Myco_tube_XTB13-132_V1	-	XTB13-132
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.97292	51.9	-	LHFY01	70	5088	4839	8/5/15	2/28/17	Contig	FDA	SAMN03894139	GCA_001241665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/665/GCA_001241665.1_Salmonella_enterica_CVM_N45394_v1.0	-	CVM N45394
Staphylococcus aureus M0610	1388404	PRJNA216575	216575	Terrabacteria group	Firmicutes	2.82049	32.8	-	JCJR01	30	2950	2778	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325528	GCA_000558105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/105/GCA_000558105.1_Stap_aure_M0610_V1	-	M0610
Staphylococcus aureus M0611	1388405	PRJNA216576	216576	Terrabacteria group	Firmicutes	2.88809	32.9	-	JCJS01	51	3047	2879	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325529	GCA_000558125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/125/GCA_000558125.1_Stap_aure_M0611_V1	-	M0611
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.77137	52.2	-	LHFZ01	49	4882	4638	8/5/15	2/28/17	Contig	FDA	SAMN03894140	GCA_001241675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/675/GCA_001241675.1_Salmonella_enterica_CVM_N45395_v1.0	-	CVM N45395
Mycobacterium tuberculosis XTB13-133	1427223	PRJNA229618	229618	Terrabacteria group	Actinobacteria	4.42464	65.6	-	JLKT01	2	4302	4105	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419579	GCA_000680675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/675/GCA_000680675.1_Myco_tube_XTB13-133_V1	-	XTB13-133
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.69653	50.9	-	JRSI01	397	4862	4555	10/26/15	2/24/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872778	GCA_001413735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/735/GCA_001413735.1_ASM141373v1	25501822	RU1 BHI2
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.15231	39.5	-	CKSS01	68	2387	2151	3/21/15	3/10/17	Contig	SC	SAMEA1025446	GCA_001173865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/865/GCA_001173865.1_6807_3_2	-	SMRU1610
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.46164	66.4	-	FRLG01	108	6188	5991	12/9/16	3/20/17	Contig	DTU	SAMEA2357375	GCA_900145315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/315/GCA_900145315.1_188	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.05115	38.9	-	NGDD01	71	3970	3833	5/15/17	5/23/17	Contig	JCVI	SAMN06837836	GCA_002137285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/285/GCA_002137285.1_ASM213728v1	-	PR376
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.65194	56.7	-	NQCX01	110	5693	5417	8/11/17	8/15/17	Contig	JCVI	SAMN07450603	GCA_002248105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/105/GCA_002248105.1_ASM224810v1	-	KPCTRSRTH06
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.7558	56.9	-	NQCY01	97	5873	5578	8/11/17	8/15/17	Contig	JCVI	SAMN07450602	GCA_002248115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/115/GCA_002248115.1_ASM224811v1	-	KPCTRSRTH07
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.04672	39	-	NGDE01	115	3992	3810	5/15/17	5/23/17	Contig	JCVI	SAMN06837835	GCA_002137295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/295/GCA_002137295.1_ASM213729v1	-	PR377
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.54302	66.2	-	FRLJ01	242	6467	6156	12/9/16	3/20/17	Contig	DTU	SAMEA2357378	GCA_900145325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/325/GCA_900145325.1_190	-	-
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.13384	39.7	-	CMWS01	105	2293	2020	3/22/15	3/10/17	Contig	SC	SAMEA1022924	GCA_001173885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/885/GCA_001173885.1_5919_1_6	-	121
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.71899	50.9	-	JRSJ01	288	4869	4545	10/26/15	2/24/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872779	GCA_001413745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/745/GCA_001413745.1_ASM141374v1	25501822	RU1 BHI3
Mycobacterium tuberculosis XTB13-134	1427224	PRJNA229619	229619	Terrabacteria group	Actinobacteria	4.42031	65.6	-	JLKS01	3	4300	4102	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419580	GCA_000680695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/695/GCA_000680695.1_Myco_tube_XTB13-134_V1	-	XTB13-134
Salmonella enterica subsp. enterica serovar Reading	165302	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.61829	52.2	-	LHGA01	43	4688	4438	8/5/15	2/28/17	Contig	FDA	SAMN03894141	GCA_001241715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/715/GCA_001241715.1_Salmonella_enterica_CVM_N45396_v1.0	-	CVM N45396
Staphylococcus aureus M0612	1388406	PRJNA216577	216577	Terrabacteria group	Firmicutes	2.92236	32.9	-	JCJT01	77	3081	2897	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325530	GCA_000558145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/145/GCA_000558145.1_Stap_aure_M0612_V1	-	M0612
Staphylococcus aureus M0613	1388407	PRJNA216578	216578	Terrabacteria group	Firmicutes	2.88092	32.8	-	JCJU01	60	3059	2883	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325531	GCA_000558165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/165/GCA_000558165.1_Stap_aure_M0613_V1	-	M0613
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.08053	51.8	-	LHGB01	76	5224	4959	8/5/15	2/28/17	Contig	FDA	SAMN03894142	GCA_001241725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/725/GCA_001241725.1_Salmonella_enterica_CVM_N45397_v1.0	-	CVM N45397
Mycobacterium tuberculosis XTB13-135	1427225	PRJNA229620	229620	Terrabacteria group	Actinobacteria	4.38918	65.6	-	JLKR01	9	4273	4102	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419581	GCA_000680715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/715/GCA_000680715.1_Myco_tube_XTB13-135_V1	-	XTB13-135
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.69792	50.9	-	JRSO01	384	4867	4556	10/26/15	2/24/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872784	GCA_001413805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/805/GCA_001413805.1_ASM141380v1	25501822	RU1 BHI8
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.1219	39.7	-	CLRG01	108	2300	2013	3/21/15	3/11/17	Contig	SC	SAMEA1029018	GCA_001173905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/905/GCA_001173905.1_6972_2_22	-	SMRU2566
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.56407	66.2	-	FRLH01	96	6382	6179	12/9/16	3/20/17	Contig	DTU	SAMEA2357379	GCA_900145335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/335/GCA_900145335.1_191	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.9977	38.9	-	NGDF01	87	3903	3750	5/15/17	5/23/17	Contig	JCVI	SAMN06837834	GCA_002137335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/335/GCA_002137335.1_ASM213733v1	-	PR379
Klebsiella pneumoniae	573	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.44316	57.2	-	NQCZ01	96	5491	5199	8/11/17	8/15/17	Contig	JCVI	SAMN07450601	GCA_002248135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/135/GCA_002248135.1_ASM224813v1	-	KPCTRSRTH08
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.55562	57.3	-	NQEB01	107	5662	5389	8/11/17	8/15/17	Contig	JCVI	SAMN07450704	GCA_002248425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/425/GCA_002248425.1_ASM224842v1	-	KPPUTH02
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.02829	38.9	-	NGDG01	79	3951	3799	5/15/17	5/23/17	Contig	JCVI	SAMN06837833	GCA_002137345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/345/GCA_002137345.1_ASM213734v1	-	PR380
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.52534	66.2	-	FRLN01	128	6351	6127	12/9/16	3/20/17	Contig	DTU	SAMEA2357380	GCA_900145345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/345/GCA_900145345.1_192	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	1.99787	39.6	-	CQVO01	50	2193	1994	3/23/15	3/11/17	Contig	SC	SAMEA1025126	GCA_001173925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/925/GCA_001173925.1_6710_8_1	-	SMRU1393
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.71335	50.9	-	JRSS01	290	4845	4533	10/26/15	2/24/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872788	GCA_001413825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/825/GCA_001413825.1_ASM141382v1	25501822	RU1 BHI12
Mycobacterium tuberculosis XTB13-136	1427226	PRJNA229621	229621	Terrabacteria group	Actinobacteria	4.4174	65.6	-	JLKQ01	3	4302	4104	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419582	GCA_000680735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/735/GCA_000680735.1_Myco_tube_XTB13-136_V1	-	XTB13-136
Salmonella enterica subsp. enterica serovar Albany	211968	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.81729	52.1	-	LHGC01	46	4876	4632	8/5/15	2/28/17	Contig	FDA	SAMN03894143	GCA_001241765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/765/GCA_001241765.1_Salmonella_enterica_CVM_N45398_v1.0	-	CVM N45398
Staphylococcus aureus M0615	1388408	PRJNA216579	216579	Terrabacteria group	Firmicutes	2.93825	32.7	-	JCJV01	66	3126	2978	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325532	GCA_000558185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/185/GCA_000558185.1_Stap_aure_M0615_V1	-	M0615
Staphylococcus aureus M0616	1388409	PRJNA216580	216580	Terrabacteria group	Firmicutes	2.91164	32.9	-	JCJW01	61	3072	2889	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325533	GCA_000558205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/205/GCA_000558205.1_Stap_aure_M0616_V1	-	M0616
Salmonella enterica subsp. enterica serovar Livingstone	260680	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.78892	52.1	-	LHGD01	163	4843	4562	8/5/15	2/28/17	Contig	FDA	SAMN03894144	GCA_001241775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/775/GCA_001241775.1_Salmonella_enterica_CVM_N45399_v1.0	-	CVM N45399
Mycobacterium tuberculosis XTB13-137	1427227	PRJNA229622	229622	Terrabacteria group	Actinobacteria	4.43123	65.6	-	JLKP01	2	4301	4107	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419583	GCA_000680755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/755/GCA_000680755.1_Myco_tube_XTB13-137_V1	-	XTB13-137
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.73182	50.9	-	JRSN01	186	4898	4540	10/26/15	2/24/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872783	GCA_001413875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/875/GCA_001413875.1_ASM141387v1	25501822	RU1 BHI7
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.13618	39.7	-	CLMC01	58	2368	2118	3/21/15	3/14/17	Contig	SC	SAMEA1029095	GCA_001173965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/965/GCA_001173965.1_6938_6_9	-	SMRU2673
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.34544	66.4	-	FRLK01	91	6023	5862	12/9/16	3/20/17	Contig	DTU	SAMEA2357381	GCA_900145355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/355/GCA_900145355.1_193	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.97781	39	-	NGDH01	142	3879	3698	5/15/17	5/23/17	Contig	JCVI	SAMN06837832	GCA_002137395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/395/GCA_002137395.1_ASM213739v1	-	PR381
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.33162	57.5	-	NQEC01	84	5383	5145	8/11/17	8/15/17	Contig	JCVI	SAMN07450703	GCA_002248435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/435/GCA_002248435.1_ASM224843v1	-	KPPUTH03
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.44359	57.4	-	NQED01	67	5457	5230	8/11/17	8/15/17	Contig	JCVI	SAMN07450702	GCA_002248485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/485/GCA_002248485.1_ASM224848v1	-	KPPUTH04
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.90604	38.9	-	NGDJ01	110	3821	3680	5/15/17	5/23/17	Contig	JCVI	SAMN06837765	GCA_002137425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/425/GCA_002137425.1_ASM213742v1	-	PR319
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.35187	66.4	-	FRLP01	177	6084	5854	12/9/16	3/20/17	Contig	DTU	SAMEA2357383	GCA_900145365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/365/GCA_900145365.1_195	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.11198	39.7	-	CNZY02	191	2315	2111	3/23/15	3/5/17	Contig	SC	SAMEA1463147	GCA_001173985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/985/GCA_001173985.2_7553_5_93	-	PT8090
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.71193	50.9	-	JRSP01	268	4838	4533	10/26/15	2/24/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872785	GCA_001413885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/885/GCA_001413885.1_ASM141388v1	25501822	RU1 BHI9
Mycobacterium tuberculosis XTB13-138	1427228	PRJNA229623	229623	Terrabacteria group	Actinobacteria	4.42985	65.6	-	JLKO01	8	4296	4101	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419584	GCA_000680775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/775/GCA_000680775.1_Myco_tube_XTB13-138_V1	-	XTB13-138
Salmonella enterica subsp. enterica serovar Litchfield	486998	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.62665	52.2	-	LHGE01	61	4663	4443	8/5/15	2/28/17	Contig	FDA	SAMN03894145	GCA_001241815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/815/GCA_001241815.1_Salmonella_enterica_CVM_N45400_v1.0	-	CVM N45400
Staphylococcus aureus M0617	1388410	PRJNA216581	216581	Terrabacteria group	Firmicutes	2.90697	32.9	-	JCJX01	65	3090	2906	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325534	GCA_000558225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/225/GCA_000558225.1_Stap_aure_M0617_V1	-	M0617
Staphylococcus aureus M0618	1388411	PRJNA216582	216582	Terrabacteria group	Firmicutes	2.9	32.9	-	JCJY01	67	3081	2900	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325535	GCA_000558245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/245/GCA_000558245.1_Stap_aure_M0618_V1	-	M0618
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.9139	52.1	-	LHGF01	65	5055	4803	8/5/15	2/28/17	Contig	FDA	SAMN03894146	GCA_001241845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/845/GCA_001241845.1_Salmonella_enterica_CVM_N45401_v1.0	-	CVM N45401
Mycobacterium tuberculosis XTB13-140	1427229	PRJNA229624	229624	Terrabacteria group	Actinobacteria	4.43043	65.6	-	JLKN01	2	4303	4108	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419585	GCA_000680795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/795/GCA_000680795.1_Myco_tube_XTB13-140_V1	-	XTB13-140
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.6718	50.9	-	JRSR01	372	4819	4515	10/26/15	2/24/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872787	GCA_001413905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/905/GCA_001413905.1_ASM141390v1	25501822	RU1 BHI11
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0077	39.7	-	CNRJ02	110	2221	2002	3/22/15	3/5/17	Contig	SC	SAMEA1032742	GCA_001174025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/025/GCA_001174025.2_6999_1_7	-	R34-3190
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.34466	66.4	-	FRLL01	120	6048	5862	12/9/16	3/20/17	Contig	DTU	SAMEA2357382	GCA_900145375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/375/GCA_900145375.1_194	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.87662	38.8	-	NGDL01	85	3790	3640	5/15/17	5/23/17	Contig	JCVI	SAMN06837763	GCA_002137445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/445/GCA_002137445.1_ASM213744v1	-	PR321
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.49801	57.3	-	NQEH01	79	5589	5308	8/11/17	8/15/17	Contig	JCVI	SAMN07450698	GCA_002248505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/505/GCA_002248505.1_ASM224850v1	-	KPPUTH08
Klebsiella pneumoniae	573	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.67263	57	-	NQEG01	95	5774	5524	8/11/17	8/15/17	Contig	JCVI	SAMN07450699	GCA_002248525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/525/GCA_002248525.1_ASM224852v1	-	KPPUTH07
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.9649	39.1	-	NGDM01	150	3910	3699	5/15/17	5/23/17	Contig	JCVI	SAMN06837762	GCA_002137475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/475/GCA_002137475.1_ASM213747v1	-	PR322
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.22884	66.6	-	FRLO01	129	5974	5783	12/9/16	3/20/17	Contig	DTU	SAMEA2357384	GCA_900145385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/385/GCA_900145385.1_196	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.03614	39.7	-	CNXA02	127	2195	2000	3/22/15	3/11/17	Contig	SC	SAMEA1032616	GCA_001174045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/045/GCA_001174045.2_7001_3_1	-	R34-3131
Escherichia coli	562	PRJNA294139	294139	Proteobacteria	Gammaproteobacteria	4.90965	50.6	-	LJCG01	152	5073	4734	10/30/15	2/25/17	Scaffold	Jilin Agricultural University	SAMN04002438	GCA_001421045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/045/GCA_001421045.1_ASM142104v1	-	SLPE
Mycobacterium tuberculosis XTB13-141	1427230	PRJNA229625	229625	Terrabacteria group	Actinobacteria	4.41304	65.6	-	JLKM01	4	4300	4098	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419586	GCA_000680815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/815/GCA_000680815.1_Myco_tube_XTB13-141_V1	-	XTB13-141
Salmonella enterica subsp. enterica serovar Montevideo	115981	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.6244	52.2	-	LHGG01	65	4718	4477	8/5/15	2/28/17	Contig	FDA	SAMN03894147	GCA_001241855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/855/GCA_001241855.1_Salmonella_enterica_CVM_N45402_v1.0	-	CVM N45402
Staphylococcus aureus M0619	1388412	PRJNA216583	216583	Terrabacteria group	Firmicutes	2.87083	32.9	-	JCJZ01	20	3006	2833	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325536	GCA_000558265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/265/GCA_000558265.1_Stap_aure_M0619_V1	-	M0619
Staphylococcus aureus M0621	1388413	PRJNA216584	216584	Terrabacteria group	Firmicutes	2.90893	33	-	JCKA01	44	3079	2896	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325537	GCA_000558285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/285/GCA_000558285.1_Stap_aure_M0621_V1	-	M0621
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93069	51.8	-	CUYN01	58	5132	4753	4/2/15	2/28/17	Contig	SC	SAMEA2153683	GCA_001241885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/885/GCA_001241885.1_10425_1_1	-	dtc8
Mycobacterium tuberculosis XTB13-143	1427232	PRJNA229627	229627	Terrabacteria group	Actinobacteria	4.42216	65.6	-	JLKK01	2	4302	4106	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419588	GCA_000680835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/835/GCA_000680835.1_Myco_tube_XTB13-143_V1	-	XTB13-143
Escherichia coli	562	PRJNA295953	295953	Proteobacteria	Gammaproteobacteria	5.03837	50.5	-	LJWY01	346	5402	4927	11/6/15	2/25/17	Scaffold	University of Liege	SAMN04095711	GCA_001440355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/355/GCA_001440355.1_ECO5_020	-	ECO5_020
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12663	39.8	-	CKST01	58	2350	2137	3/21/15	3/11/17	Contig	SC	SAMEA1025468	GCA_001174105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/105/GCA_001174105.1_6807_3_20	-	SMRU1628
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.23511	66.6	-	FRLM01	114	5960	5786	12/9/16	3/20/17	Contig	DTU	SAMEA2357387	GCA_900145395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/395/GCA_900145395.1_199	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.11494	39	-	NGDN01	148	4019	3813	5/15/17	5/23/17	Contig	JCVI	SAMN06837761	GCA_002137495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/495/GCA_002137495.1_ASM213749v1	-	PR323
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.48417	57.3	-	NQEI01	95	5573	5315	8/11/17	8/15/17	Contig	JCVI	SAMN07450697	GCA_002248545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/545/GCA_002248545.1_ASM224854v1	-	KPPSTH01
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.52764	57.2	-	NQEJ01	75	5551	5283	8/11/17	8/15/17	Contig	JCVI	SAMN07450696	GCA_002248585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/585/GCA_002248585.1_ASM224858v1	-	KPPSTH02
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.97729	38.9	-	NGDP01	85	3910	3759	5/15/17	5/23/17	Contig	JCVI	SAMN06837759	GCA_002137525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/525/GCA_002137525.1_ASM213752v1	-	PR325
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	7.03941	65.8	-	FRLU01	191	6801	6540	12/9/16	3/20/17	Contig	DTU	SAMEA2357389	GCA_900145405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/405/GCA_900145405.1_200	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12184	39.6	-	COEE02	145	2340	2128	3/22/15	3/11/17	Contig	SC	SAMEA1463179	GCA_001174125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/125/GCA_001174125.2_7622_4_41	-	LE4150
Escherichia coli	562	PRJNA295953	295953	Proteobacteria	Gammaproteobacteria	5.01622	50.5	-	LKCZ01	379	5341	4869	11/6/15	2/25/17	Scaffold	University of Liege	SAMN04100267	GCA_001440565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/565/GCA_001440565.1_ASM144056v1	-	ECO5_060
Mycobacterium tuberculosis XTB13-144	1427233	PRJNA229628	229628	Terrabacteria group	Actinobacteria	4.39635	65.6	-	JLKJ01	3	4279	4099	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419589	GCA_000680855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/855/GCA_000680855.1_Myco_tube_XTB13-144_V1	-	XTB13-144
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.01146	52.1	-	LHGH01	64	5154	4908	8/5/15	2/28/17	Contig	FDA	SAMN03894148	GCA_001241895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/895/GCA_001241895.1_Salmonella_enterica_CVM_N45403_v1.0	-	CVM N45403
Staphylococcus aureus M0623	1388414	PRJNA216585	216585	Terrabacteria group	Firmicutes	2.9195	32.9	-	JCKB01	58	3085	2908	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325538	GCA_000558305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/305/GCA_000558305.1_Stap_aure_M0623_V1	-	M0623
Staphylococcus aureus M0624	1388415	PRJNA216586	216586	Terrabacteria group	Firmicutes	2.88542	32.8	-	JCKC01	42	3046	2868	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325539	GCA_000558325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/325/GCA_000558325.1_Stap_aure_M0624_V1	-	M0624
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.01091	52.1	-	LHGI01	78	5152	4900	8/5/15	2/28/17	Contig	FDA	SAMN03894149	GCA_001241905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/905/GCA_001241905.1_Salmonella_enterica_CVM_N45404_v1.0	-	CVM N45404
Mycobacterium tuberculosis XTB13-145	1427234	PRJNA229629	229629	Terrabacteria group	Actinobacteria	4.42118	65.6	-	JLKI01	2	4295	4105	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419590	GCA_000680875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/875/GCA_000680875.1_Myco_tube_XTB13-145_V1	-	XTB13-145
Escherichia coli	562	PRJNA295953	295953	Proteobacteria	Gammaproteobacteria	5.11961	50.4	-	LKDA01	374	5520	5018	11/6/15	2/25/17	Scaffold	University of Liege	SAMN04100269	GCA_001440575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/575/GCA_001440575.1_ASM144057v1	-	ECO_086
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.01805	39.7	-	COEK02	161	2167	1973	3/23/15	3/11/17	Contig	SC	SAMEA1463172	GCA_001174205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/205/GCA_001174205.2_7622_4_43	-	MD5008
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.22327	66.6	-	FRLQ01	182	5992	5775	12/9/16	3/20/17	Contig	DTU	SAMEA2357385	GCA_900145415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/415/GCA_900145415.1_197	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.05813	39	-	NGDQ01	150	4019	3815	5/15/17	5/23/17	Contig	JCVI	SAMN06837758	GCA_002137555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/555/GCA_002137555.1_ASM213755v1	-	PR327
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.61684	57.1	-	NQEL01	83	5658	5418	8/11/17	8/15/17	Contig	JCVI	SAMN07450694	GCA_002248595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/595/GCA_002248595.1_ASM224859v1	-	KPPSTH04
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.59988	57.1	-	NQAX01	111	5763	5448	8/11/17	8/15/17	Contig	JCVI	SAMN07450576	GCA_002248625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/625/GCA_002248625.1_ASM224862v1	-	KPCRETH13
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.87744	38.9	-	NGDR01	111	3790	3626	5/15/17	5/23/17	Contig	JCVI	SAMN06837757	GCA_002137565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/565/GCA_002137565.1_ASM213756v1	-	PR328
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.23619	66.6	-	FRLR01	106	5951	5786	12/9/16	3/20/17	Contig	DTU	SAMEA2357386	GCA_900145425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/425/GCA_900145425.1_198	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.0039	39.7	-	CRHH01	52	2171	1953	3/23/15	3/4/17	Contig	SC	SAMEA1025272	GCA_001174345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/345/GCA_001174345.1_6736_7_19	-	SMRU1291
Escherichia coli	562	PRJNA295953	295953	Proteobacteria	Gammaproteobacteria	4.98703	50.4	-	LKDB01	368	5256	4842	11/6/15	2/25/17	Scaffold	University of Liege	SAMN04100279	GCA_001440595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/595/GCA_001440595.1_ASM144059v1	-	ECO_097
Mycobacterium tuberculosis XTB13-146	1427235	PRJNA229630	229630	Terrabacteria group	Actinobacteria	4.42258	65.6	-	JLKH01	2	4300	4109	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419591	GCA_000680895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/895/GCA_000680895.1_Myco_tube_XTB13-146_V1	-	XTB13-146
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.95086	52.1	-	LHGJ01	141	5081	4834	8/5/15	2/28/17	Contig	FDA	SAMN03894150	GCA_001241945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/945/GCA_001241945.1_Salmonella_enterica_CVM_N45405_v1.0	-	CVM N45405
Staphylococcus aureus M0204	1388135	PRJNA216304	216304	Terrabacteria group	Firmicutes	2.92413	32.8	-	JCAL01	47	3095	2917	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325259	GCA_000558365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/365/GCA_000558365.1_Stap_aure_M0204_V1	-	M0204
Staphylococcus aureus M0229	1388151	PRJNA216320	216320	Terrabacteria group	Firmicutes	2.88345	32.8	-	JCBB01	39	3034	2854	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325275	GCA_000558385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/385/GCA_000558385.1_Stap_aure_M0229_V1	-	M0229
Salmonella enterica subsp. enterica serovar Worthington	1160769	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.84979	52.2	-	LHGK01	92	4913	4657	8/5/15	2/28/17	Contig	FDA	SAMN03894151	GCA_001241965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/965/GCA_001241965.1_Salmonella_enterica_CVM_N45406_v1.0	-	CVM N45406
Mycobacterium tuberculosis XTB13-147	1427236	PRJNA229631	229631	Terrabacteria group	Actinobacteria	4.42754	65.6	-	JLKG01	2	4297	4101	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419592	GCA_000680915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/915/GCA_000680915.1_Myco_tube_XTB13-147_V1	-	XTB13-147
Escherichia coli	562	PRJNA295953	295953	Proteobacteria	Gammaproteobacteria	5.20423	50.4	-	LKDC01	231	5622	5135	11/6/15	2/25/17	Scaffold	University of Liege	SAMN04100281	GCA_001440615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/615/GCA_001440615.1_ASM144061v1	-	ECO5_109
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.28394	39.5	-	CKSK01	98	2565	2310	3/21/15	3/4/17	Contig	SC	SAMEA1025423	GCA_001174525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/525/GCA_001174525.1_6807_3_23	-	SMRU1631
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.85704	65.9	-	FRLS01	125	6562	6352	12/9/16	3/20/17	Contig	DTU	SAMEA2357390	GCA_900145435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/435/GCA_900145435.1_201	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.6632	39.1	-	NGDS01	191	3675	3369	5/15/17	5/23/17	Contig	JCVI	SAMN06837756	GCA_002137575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/575/GCA_002137575.1_ASM213757v1	-	PR329
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.46412	57.3	-	NQEM01	91	5468	5219	8/11/17	8/15/17	Contig	JCVI	SAMN07450693	GCA_002248635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/635/GCA_002248635.1_ASM224863v1	-	KPPSTH05
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.42698	57.3	-	NQCH01	69	5460	5237	8/11/17	8/15/17	Contig	JCVI	SAMN07450681	GCA_002248815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/815/GCA_002248815.1_ASM224881v1	-	KPH+04
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.7839	38.9	-	NGDW01	46	3611	3489	5/15/17	5/23/17	Contig	JCVI	SAMN06837752	GCA_002137645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/645/GCA_002137645.1_ASM213764v1	-	PR333
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.80164	66	-	FRLT01	161	6553	6316	12/9/16	3/20/17	Contig	DTU	SAMEA2357393	GCA_900145445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/445/GCA_900145445.1_203	-	-
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.0782	39.6	-	CKJY01	62	2281	2059	3/21/15	3/4/17	Contig	SC	SAMEA1023837	GCA_001174565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/565/GCA_001174565.1_6631_6_11	-	4
Escherichia coli	562	PRJNA295953	295953	Proteobacteria	Gammaproteobacteria	5.04829	50.4	-	LKDD01	381	5359	4938	11/6/15	2/25/17	Scaffold	University of Liege	SAMN04100286	GCA_001440645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/645/GCA_001440645.1_ASM144064v1	-	ECO5_174
Mycobacterium tuberculosis XTB13-150	1427237	PRJNA229632	229632	Terrabacteria group	Actinobacteria	4.43205	65.6	-	JLKF01	2	4306	4112	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419593	GCA_000680935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/935/GCA_000680935.1_Myco_tube_XTB13-150_V1	-	XTB13-150
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.92628	52.1	-	LHGL01	142	5065	4808	8/5/15	2/28/17	Contig	FDA	SAMN03894153	GCA_001241975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/975/GCA_001241975.1_Salmonella_enterica_CVM_N45408_v1.0	-	CVM N45408
Staphylococcus aureus M0230	1388152	PRJNA216321	216321	Terrabacteria group	Firmicutes	2.92186	32.8	-	JCBC01	70	3124	2947	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325276	GCA_000558405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/405/GCA_000558405.1_Stap_aure_M0230_V1	-	M0230
Staphylococcus aureus M0231	1388153	PRJNA216322	216322	Terrabacteria group	Firmicutes	2.86067	32.8	-	JCBD01	42	3002	2842	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325277	GCA_000558425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/425/GCA_000558425.1_Stap_aure_M0231_V1	-	M0231
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.73253	52.2	-	LHGM01	66	4799	4565	8/5/15	2/28/17	Contig	FDA	SAMN03894156	GCA_001242005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/005/GCA_001242005.1_Salmonella_enterica_CVM_N45411_v1.0	-	CVM N45411
Mycobacterium tuberculosis XTB13-152	1427238	PRJNA229633	229633	Terrabacteria group	Actinobacteria	4.42279	65.6	-	JLKE01	3	4298	4114	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419594	GCA_000680955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/955/GCA_000680955.1_Myco_tube_XTB13-152_V1	-	XTB13-152
Escherichia coli	562	PRJNA295953	295953	Proteobacteria	Gammaproteobacteria	4.9522	50.4	-	LKDE01	341	5233	4795	11/6/15	2/25/17	Scaffold	University of Liege	SAMN04100453	GCA_001440655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/655/GCA_001440655.1_ASM144065v1	-	ECO5_188
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07036	39.5	-	CNQL02	260	2196	2001	3/23/15	3/11/17	Contig	SC	SAMEA1032662	GCA_001174605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/605/GCA_001174605.2_6952_7_20	-	R34-3180
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	7.01919	66	-	FRLV01	156	6777	6541	12/9/16	3/20/17	Contig	DTU	SAMEA2357392	GCA_900145455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/455/GCA_900145455.1_202	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.04705	38.9	-	NGDV01	64	3968	3809	5/15/17	5/23/17	Contig	JCVI	SAMN06837753	GCA_002137655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/655/GCA_002137655.1_ASM213765v1	-	PR332
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.64566	57.2	-	NQCI01	115	5789	5478	8/11/17	8/15/17	Contig	JCVI	SAMN07450680	GCA_002248845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/845/GCA_002248845.1_ASM224884v1	-	KPH+05
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.38866	57.4	-	NQDA01	73	5398	5153	8/11/17	8/15/17	Contig	JCVI	SAMN07450600	GCA_002248955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/955/GCA_002248955.1_ASM224895v1	-	KPCTRSRTH09
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.01795	39	-	NGDX01	129	3985	3782	5/15/17	5/23/17	Contig	JCVI	SAMN06837751	GCA_002137695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/695/GCA_002137695.1_ASM213769v1	-	PR334
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.89109	65.9	-	FRLW01	118	6620	6411	12/9/16	3/20/17	Contig	DTU	SAMEA2357395	GCA_900145465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/465/GCA_900145465.1_204	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08387	39.7	-	CQUO01	57	2309	2094	3/23/15	3/4/17	Contig	SC	SAMEA1025499	GCA_001174665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/665/GCA_001174665.1_6710_6_20	-	SMRU1364
Escherichia coli	562	PRJNA295953	295953	Proteobacteria	Gammaproteobacteria	4.8826	50.4	-	LKPK01	352	5114	4722	11/6/15	2/25/17	Scaffold	University of Liege	SAMN04100459	GCA_001440665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/665/GCA_001440665.1_ASM144066v1	-	ECO5_196
Mycobacterium tuberculosis XTB13-153	1427239	PRJNA229634	229634	Terrabacteria group	Actinobacteria	4.42003	65.6	-	JLKD01	2	4307	4113	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419595	GCA_000680975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/975/GCA_000680975.1_Myco_tube_XTB13-153_V1	-	XTB13-153
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.99592	51.9	-	LHGN01	141	5123	4793	8/5/15	2/28/17	Contig	FDA	SAMN03894157	GCA_001242015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/015/GCA_001242015.1_Salmonella_enterica_CVM_N45412_v1.0	-	CVM N45412
Staphylococcus aureus M0232	1388154	PRJNA216323	216323	Terrabacteria group	Firmicutes	2.90441	32.8	-	JCBE01	68	3096	2907	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325278	GCA_000558445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/445/GCA_000558445.1_Stap_aure_M0232_V1	-	M0232
Staphylococcus aureus M0234	1388155	PRJNA216324	216324	Terrabacteria group	Firmicutes	2.87351	32.9	-	JCBF01	40	3019	2831	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325279	GCA_000558465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/465/GCA_000558465.1_Stap_aure_M0234_V1	-	M0234
Salmonella enterica subsp. enterica serovar Berta	28142	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.92974	52.2	-	LHGO01	109	5076	4806	8/5/15	2/28/17	Contig	FDA	SAMN03894158	GCA_001242065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/065/GCA_001242065.1_Salmonella_enterica_CVM_N45924_v1.0	-	CVM N45924
Mycobacterium tuberculosis XTB13-154	1427240	PRJNA229635	229635	Terrabacteria group	Actinobacteria	4.42937	65.6	-	JLKC01	2	4299	4100	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419596	GCA_000680995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/680/995/GCA_000680995.1_Myco_tube_XTB13-154_V1	-	XTB13-154
Escherichia coli	562	PRJNA295953	295953	Proteobacteria	Gammaproteobacteria	4.91739	50.4	-	LLEW01	525	5284	4767	11/6/15	2/25/17	Scaffold	University of Liege	SAMN04103128	GCA_001440775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/775/GCA_001440775.1_ASM144077v1	-	33645
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.15123	39.6	-	CMBZ01	51	2383	2149	3/21/15	3/4/17	Contig	SC	SAMEA1029209	GCA_001174725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/725/GCA_001174725.1_7004_8_73	-	SMRU2905
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.90379	65.9	-	FRLY01	101	6619	6421	12/9/16	3/20/17	Contig	DTU	SAMEA2357396	GCA_900145475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/475/GCA_900145475.1_205	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.84294	38.9	-	NGDY01	113	3756	3602	5/15/17	5/23/17	Contig	JCVI	SAMN06837750	GCA_002137715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/715/GCA_002137715.1_ASM213771v1	-	PR335
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.53731	56.9	-	NQEN01	62	5593	5364	8/11/17	8/15/17	Contig	JCVI	SAMN07450692	GCA_002249125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/125/GCA_002249125.1_ASM224912v1	-	KPPSTH06
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.59912	57	-	NQEE01	91	5640	5378	8/11/17	8/15/17	Contig	JCVI	SAMN07450701	GCA_002249165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/165/GCA_002249165.1_ASM224916v1	-	KPPUTH05
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.23789	38.8	-	NGEA01	61	4074	3897	5/15/17	6/15/17	Contig	JCVI	SAMN06837748	GCA_002137725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/725/GCA_002137725.1_ASM213772v1	-	PR337
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.24215	66.6	-	FRLX01	76	5938	5790	12/9/16	3/20/17	Contig	DTU	SAMEA2357397	GCA_900145485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/485/GCA_900145485.1_206	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12603	39.6	-	CNOT02	144	2314	2107	3/23/15	3/11/17	Contig	SC	SAMEA1032686	GCA_001174925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/925/GCA_001174925.2_6925_2_93	-	R34-3075
Escherichia coli	562	PRJNA295953	295953	Proteobacteria	Gammaproteobacteria	5.07674	50.5	-	LKDH01	301	5436	4979	11/6/15	2/25/17	Scaffold	University of Liege	SAMN04103129	GCA_001440805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/805/GCA_001440805.1_ASM144080v1	-	35402
Mycobacterium tuberculosis XTB13-155	1427241	PRJNA229636	229636	Terrabacteria group	Actinobacteria	4.42303	65.6	-	JLKB01	2	4304	4107	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419597	GCA_000681015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/015/GCA_000681015.1_Myco_tube_XTB13-155_V1	-	XTB13-155
Salmonella enterica subsp. enterica serovar Berta	28142	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.88787	52.1	-	LHGP01	245	5057	4751	8/5/15	2/28/17	Contig	FDA	SAMN03894159	GCA_001242075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/075/GCA_001242075.1_Salmonella_enterica_CVM_N45925_v1.0	-	CVM N45925
Staphylococcus aureus M0236	1388156	PRJNA216325	216325	Terrabacteria group	Firmicutes	2.73415	32.8	-	JCBG01	39	2817	2639	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325280	GCA_000558485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/485/GCA_000558485.1_Stap_aure_M0236_V1	-	M0236
Staphylococcus aureus M0242	1388158	PRJNA216327	216327	Terrabacteria group	Firmicutes	2.9021	32.9	-	JCBI01	66	3079	2896	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325282	GCA_000558505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/505/GCA_000558505.1_Stap_aure_M0242_V1	-	M0242
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.9389	52	-	LHGQ01	75	5067	4813	8/5/15	2/28/17	Contig	FDA	SAMN03894160	GCA_001242115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/115/GCA_001242115.1_Salmonella_enterica_CVM_N45926_v1.0	-	CVM N45926
Mycobacterium tuberculosis XTB13-156	1427242	PRJNA229637	229637	Terrabacteria group	Actinobacteria	4.41896	65.6	-	JLKA01	5	4309	4110	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419598	GCA_000681035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/035/GCA_000681035.1_Myco_tube_XTB13-156_V1	-	XTB13-156
Escherichia coli	562	PRJNA301496	301496	Proteobacteria	Gammaproteobacteria	5.21018	50.8	-	LNAE01	80	5452	5114	11/12/15	2/25/17	Scaffold	Massachusetts Eye and Ear Infirmary/Harvard Medical School	SAMN04251104	GCA_001442595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/595/GCA_001442595.1_ASM144259v1	-	MEEI01
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.04792	39.6	-	CQWB01	47	2248	2031	3/22/15	3/10/17	Contig	SC	SAMEA1025186	GCA_001191735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/735/GCA_001191735.1_6710_8_24	-	SMRU1416
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.24021	66.6	-	FRLZ01	73	5931	5785	12/9/16	3/20/17	Contig	DTU	SAMEA2357398	GCA_900145495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/495/GCA_900145495.1_207	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.82154	39	-	NGEC01	49	3713	3541	5/15/17	5/23/17	Contig	JCVI	SAMN06837742	GCA_002137755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/755/GCA_002137755.1_ASM213775v1	-	PR340
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.53677	57.3	-	NQEP01	76	5585	5355	8/11/17	8/15/17	Contig	JCVI	SAMN07450690	GCA_002249195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/195/GCA_002249195.1_ASM224919v1	-	KPPSTH08
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.66847	56.9	-	NQEO01	100	5741	5464	8/11/17	8/15/17	Contig	JCVI	SAMN07450691	GCA_002249535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/535/GCA_002249535.1_ASM224953v1	-	KPPSTH07
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.72607	38.9	-	NGEE01	65	3548	3408	5/15/17	5/23/17	Contig	JCVI	SAMN06837740	GCA_002137775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/775/GCA_002137775.1_ASM213777v1	-	PR343
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.23757	66.6	-	FRMA01	67	5926	5787	12/9/16	3/20/17	Contig	DTU	SAMEA2357399	GCA_900145505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/505/GCA_900145505.1_208	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07512	39.6	-	CRKW01	72	2285	2059	3/22/15	3/4/17	Contig	SC	SAMEA1025178	GCA_001191835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/835/GCA_001191835.1_6753_4_21	-	SMRU1557
Escherichia coli	562	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	4.92132	55.1	-	LKAY01	52	4861	4623	11/13/15	2/25/17	Scaffold	University of Minnesota	SAMN04105225	GCA_001443095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/443/095/GCA_001443095.1_ASM144309v1	26438492	MNCRE22
Mycobacterium tuberculosis XTB13-158	1427243	PRJNA229638	229638	Terrabacteria group	Actinobacteria	4.42976	65.5	-	JLJZ01	7	4307	4119	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419599	GCA_000681055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/055/GCA_000681055.1_Myco_tube_XTB13-158_V1	-	XTB13-158
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.80529	52.1	-	LHGR01	52	4930	4690	8/5/15	2/28/17	Contig	FDA	SAMN03894161	GCA_001242125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/125/GCA_001242125.1_Salmonella_enterica_CVM_N45927_v1.0	-	CVM N45927
Staphylococcus aureus M0244	1388159	PRJNA216328	216328	Terrabacteria group	Firmicutes	2.85858	32.9	-	JCBJ01	18	2991	2821	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325283	GCA_000558525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/525/GCA_000558525.1_Stap_aure_M0244_V1	-	M0244
Staphylococcus aureus M0245	1388160	PRJNA216329	216329	Terrabacteria group	Firmicutes	2.87423	32.9	-	JCBK01	46	3029	2840	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325284	GCA_000558545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/545/GCA_000558545.1_Stap_aure_M0245_V1	-	M0245
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.72241	52.1	-	LHGS01	66	4817	4573	8/5/15	2/28/17	Contig	FDA	SAMN03894162	GCA_001242165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/165/GCA_001242165.1_Salmonella_enterica_CVM_N45928_v1.0	-	CVM N45928
Mycobacterium tuberculosis XTB13-159	1427244	PRJNA229639	229639	Terrabacteria group	Actinobacteria	4.39377	65.5	-	JLJY01	2	4264	4104	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419600	GCA_000681075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/075/GCA_000681075.1_Myco_tube_XTB13-159_V1	-	XTB13-159
Escherichia coli	562	PRJNA298688	298688	Proteobacteria	Gammaproteobacteria	6.27387	50.1	-	LMBK01	597	6937	6319	12/1/15	2/25/17	Scaffold	Anses	SAMN04161565	GCA_001455035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/035/GCA_001455035.2_EC22593v3	26868385	22593
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.14814	39.5	-	CRGQ01	50	2362	2144	3/23/15	3/4/17	Contig	SC	SAMEA1025643	GCA_001192055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/055/GCA_001192055.1_6736_6_2	-	SMRU1250
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.23592	66.6	-	FRMB01	72	5932	5783	12/9/16	3/20/17	Contig	DTU	SAMEA2357400	GCA_900145515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/515/GCA_900145515.1_209	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.16115	39	-	NGED01	94	4111	3946	5/15/17	5/23/17	Contig	JCVI	SAMN06837741	GCA_002137795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/795/GCA_002137795.1_ASM213779v1	-	PR341
Klebsiella pneumoniae	573	PRJNA382374	382374	Proteobacteria	Gammaproteobacteria	5.57391	57.1917	plasmid pPOAMCR-1KP:NZ_CM008162.1/CM008162.1	NHOE01	122	5707	5407	8/14/17	8/16/17	Contig	Hospital de Clinicas de Porto Alegre	SAMN06705214	GCA_002251715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/715/GCA_002251715.1_ASM225171v1	-	3111F
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.64812	56.7	-	NQLJ01	96	5677	5397	8/14/17	8/16/17	Contig	JCVI	SAMN07450608	GCA_002251875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/875/GCA_002251875.1_ASM225187v1	-	KPCTRSRTH01
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.08462	38.9	-	NGEG01	83	4001	3845	5/15/17	5/23/17	Contig	JCVI	SAMN06837737	GCA_002137815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/815/GCA_002137815.1_ASM213781v1	-	PR345
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.22865	66.6	-	FRMC01	73	5922	5780	12/9/16	3/20/17	Contig	DTU	SAMEA2357402	GCA_900145525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/525/GCA_900145525.1_210	-	-
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10455	39.5	-	CRNK01	54	2322	2099	3/23/15	3/4/17	Contig	SC	SAMEA1024605	GCA_001192295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/295/GCA_001192295.1_6755_4_16	-	SMRU1144
Escherichia coli	562	PRJNA304203	304203	Proteobacteria	Gammaproteobacteria	5.22435	50.3004	plasmid pSYAB1:NZ_CM003779.1/CM003779.1	LNUH01	102	5375	5057	2/17/16	2/25/17	Scaffold	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04296774	GCA_001562635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/635/GCA_001562635.1_ASM156263v1	-	SYAU2
Mycobacterium tuberculosis XTB13-161	1427245	PRJNA229640	229640	Terrabacteria group	Actinobacteria	4.44174	65.5	-	JLJX01	5	4305	4115	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419601	GCA_000681095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/095/GCA_000681095.1_Myco_tube_XTB13-161_V1	-	XTB13-161
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.72042	52.1	-	LHGT01	101	4833	4570	8/5/15	2/28/17	Contig	FDA	SAMN03894163	GCA_001242185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/185/GCA_001242185.1_Salmonella_enterica_CVM_N45929_v1.0	-	CVM N45929
Staphylococcus aureus M0246	1388161	PRJNA216330	216330	Terrabacteria group	Firmicutes	2.84191	32.8	-	JCBL01	38	2971	2817	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325285	GCA_000558565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/565/GCA_000558565.1_Stap_aure_M0246_V1	-	M0246
Staphylococcus aureus M0247	1388162	PRJNA216331	216331	Terrabacteria group	Firmicutes	2.90934	32.9	-	JCBM01	58	3090	2909	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325286	GCA_000558585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/585/GCA_000558585.1_Stap_aure_M0247_V1	-	M0247
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91752	52.1	-	LHGU01	139	5072	4814	8/5/15	2/28/17	Contig	FDA	SAMN03894164	GCA_001242195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/195/GCA_001242195.1_Salmonella_enterica_CVM_N45930_v1.0	-	CVM N45930
Mycobacterium tuberculosis XTB13-162	1427246	PRJNA229641	229641	Terrabacteria group	Actinobacteria	4.42471	65.6	-	JLJW01	2	4297	4098	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419602	GCA_000681115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/115/GCA_000681115.1_Myco_tube_XTB13-162_V1	-	XTB13-162
Escherichia coli	562	PRJNA304203	304203	Proteobacteria	Gammaproteobacteria	5.16639	50.3005	plasmid pSYAB1:NZ_CM003778.1/CM003778.1	LNUJ01	92	5325	5006	2/17/16	2/25/17	Scaffold	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04296776	GCA_001562645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/645/GCA_001562645.1_ASM156264v1	-	SYAU4
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10478	39.4	-	CRWU01	108	2349	2119	3/23/15	3/4/17	Contig	SC	SAMEA1025375	GCA_001192335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/335/GCA_001192335.1_6807_2_11	-	SMRU1595
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.22782	66.6	-	FRMD01	83	5930	5776	12/9/16	3/20/17	Contig	DTU	SAMEA2357403	GCA_900145535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/535/GCA_900145535.1_211	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.08765	39	-	NGEK01	90	4037	3866	5/15/17	5/23/17	Contig	JCVI	SAMN06837803	GCA_002137875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/875/GCA_002137875.1_ASM213787v1	-	PR349
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.59695	57.1	-	NQLH01	84	5642	5354	8/14/17	8/16/17	Contig	JCVI	SAMN07450554	GCA_002251895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/895/GCA_002251895.1_ASM225189v1	-	KPCRETH31
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.36924	57.4	-	NBXZ01	55	5400	5142	8/18/17	8/21/17	Contig	"West China Hospital, Sichuan University"	SAMN06671965	GCA_002257795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/795/GCA_002257795.1_ASM225779v1	-	WCHKP1716
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.94001	39	-	NGEI01	114	3825	3673	5/15/17	5/23/17	Contig	JCVI	SAMN06837807	GCA_002137895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/895/GCA_002137895.1_ASM213789v1	-	PR347
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.24341	66.6	-	FRME01	78	5941	5793	12/9/16	3/20/17	Contig	DTU	SAMEA2357404	GCA_900145545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/545/GCA_900145545.1_212	-	-
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.09784	39.6	-	CRNI01	53	2317	2091	3/23/15	3/10/17	Contig	SC	SAMEA1024582	GCA_001192555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/555/GCA_001192555.1_6755_4_13	-	SMRU1141
Escherichia coli	562	PRJNA304203	304203	Proteobacteria	Gammaproteobacteria	5.17409	50.3004	plasmid pSYAB1:NZ_CM003777.1/CM003777.1	LNUI01	95	5315	5005	2/17/16	2/25/17	Scaffold	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04296775	GCA_001562655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/655/GCA_001562655.1_ASM156265v1	-	SYAU3
Mycobacterium tuberculosis XTB13-165	1427248	PRJNA229644	229644	Terrabacteria group	Actinobacteria	4.41859	65.6	-	JLJV01	7	4308	4105	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419604	GCA_000681135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/135/GCA_000681135.1_Myco_tube_XTB13-165_V1	-	XTB13-165
Salmonella enterica subsp. enterica serovar Worthington	1160769	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.85161	52.2	-	LHGV01	55	4912	4661	8/5/15	2/28/17	Contig	FDA	SAMN03894165	GCA_001242245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/245/GCA_001242245.1_Salmonella_enterica_CVM_N45931_v1.0	-	CVM N45931
Staphylococcus aureus M0249	1388164	PRJNA216333	216333	Terrabacteria group	Firmicutes	2.86832	32.8	-	JCBN01	49	2982	2835	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325288	GCA_000558605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/605/GCA_000558605.1_Stap_aure_M0249_V1	-	M0249
Staphylococcus aureus M0251	1388165	PRJNA216334	216334	Terrabacteria group	Firmicutes	2.8501	32.8	-	JCBO01	47	3009	2848	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02325289	GCA_000558625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/625/GCA_000558625.1_Stap_aure_M0251_V1	-	M0251
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.74837	52.1	-	LHGW01	62	4828	4590	8/5/15	2/28/17	Contig	FDA	SAMN03894166	GCA_001242265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/265/GCA_001242265.1_Salmonella_enterica_CVM_N45932_v1.0	-	CVM N45932
Mycobacterium tuberculosis XTB13-167	1427249	PRJNA229645	229645	Terrabacteria group	Actinobacteria	4.42398	65.5	-	JLJU01	7	4293	4111	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419605	GCA_000681155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/155/GCA_000681155.1_Myco_tube_XTB13-167_V1	-	XTB13-167
Escherichia coli	562	PRJNA304203	304203	Proteobacteria	Gammaproteobacteria	5.24141	50.3	-	LNUE01	106	5409	5066	2/17/16	2/25/17	Scaffold	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04296771	GCA_001562695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/695/GCA_001562695.1_ASM156269v1	-	SYAB3
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.03811	39.7	-	CRRO01	43	2234	2022	3/23/15	3/10/17	Contig	SC	SAMEA1024880	GCA_001192615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/615/GCA_001192615.1_6805_1_22	-	SMRU1030
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.23763	66.6	-	FRMF01	73	5928	5792	12/9/16	3/20/17	Contig	DTU	SAMEA2357405	GCA_900145555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/555/GCA_900145555.1_213	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.13561	39.2	-	NGEL01	196	4205	3862	5/15/17	5/23/17	Contig	JCVI	SAMN06837802	GCA_002137945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/945/GCA_002137945.1_ASM213794v1	-	PR350
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.45966	57.3	-	NBYC01	74	5519	5244	8/18/17	8/21/17	Contig	"West China Hospital, Sichuan University"	SAMN06671962	GCA_002257865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/865/GCA_002257865.1_ASM225786v1	-	WCHKP1368
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.56428	57.2	-	NBXY01	73	5622	5369	8/18/17	8/21/17	Contig	"West China Hospital, Sichuan University"	SAMN06671966	GCA_002258105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/105/GCA_002258105.1_ASM225810v1	-	WCHKP2005
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.91497	39	-	NGEM01	58	3767	3618	5/15/17	5/23/17	Contig	JCVI	SAMN06837769	GCA_002137955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/955/GCA_002137955.1_ASM213795v1	-	PR315
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.80178	66	-	FRMG01	101	6470	6278	12/9/16	3/20/17	Contig	DTU	SAMEA2357406	GCA_900145565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/565/GCA_900145565.1_214	-	-
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10998	39.7	-	CRMX01	70	2270	1972	3/23/15	3/11/17	Contig	SC	SAMEA1024857	GCA_001193055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/055/GCA_001193055.1_6755_3_22	-	SMRU886
Escherichia coli	562	PRJNA304203	304203	Proteobacteria	Gammaproteobacteria	5.24145	50.3004	plasmid pSYAB1:NZ_CM003776.1/CM003776.1	LNUC01	115	5424	5071	2/17/16	2/25/17	Scaffold	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04296768	GCA_001562705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/705/GCA_001562705.1_ASM156270v1	-	SYAB1
Mycobacterium tuberculosis XTB13-168	1427250	PRJNA229646	229646	Terrabacteria group	Actinobacteria	4.42943	65.6	-	JLJT01	3	4323	4116	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419606	GCA_000681175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/175/GCA_000681175.1_Myco_tube_XTB13-168_V1	-	XTB13-168
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.96972	52.1	-	LHGY01	96	5100	4845	8/5/15	2/28/17	Contig	FDA	SAMN03894169	GCA_001242275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/275/GCA_001242275.1_Salmonella_enterica_CVM_N45935_v1.0	-	CVM N45935
Staphylococcus aureus FVRH6021	1409599	PRJNA223919	223919	Terrabacteria group	Firmicutes	2.91141	32.8	-	JBJT01	10	3060	2892	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02381660	GCA_000558645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/645/GCA_000558645.1_Stap_aure_FVRH6021_V1	-	FVRH6021
Staphylococcus aureus FVRH6026	1409600	PRJNA223920	223920	Terrabacteria group	Firmicutes	2.89067	32.9	-	JBJS01	18	3023	2848	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02381661	GCA_000558665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/665/GCA_000558665.1_Stap_aure_FVRH6026_V1	-	FVRH6026
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.00585	51.8	-	LHGX01	174	5076	4741	8/5/15	2/28/17	Contig	FDA	SAMN03894168	GCA_001242285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/285/GCA_001242285.1_Salmonella_enterica_CVM_N45934_v1.0	-	CVM N45934
Mycobacterium tuberculosis XTB13-169	1427251	PRJNA229647	229647	Terrabacteria group	Actinobacteria	4.40677	65.6	-	JLJS01	13	4277	4093	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419607	GCA_000681195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/195/GCA_000681195.1_Myco_tube_XTB13-169_V1	-	XTB13-169
Escherichia coli	562	PRJNA304203	304203	Proteobacteria	Gammaproteobacteria	5.18761	50.3	-	LNUG01	103	5337	5021	2/17/16	2/25/17	Scaffold	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04296773	GCA_001562715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/715/GCA_001562715.1_ASM156271v1	-	SYAU1
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.95049	39.8	-	CRYK01	40	2142	1942	3/22/15	3/10/17	Contig	SC	SAMEA970296	GCA_001193215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/215/GCA_001193215.1_5242_8_10	-	BHN599
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.23746	66.6	-	FRMI01	62	5921	5796	12/9/16	3/20/17	Contig	DTU	SAMEA2357407	GCA_900145575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/575/GCA_900145575.1_215	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.82231	38.9	-	NGEO01	113	3716	3564	5/15/17	5/23/17	Contig	JCVI	SAMN06837767	GCA_002137995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/137/995/GCA_002137995.1_ASM213799v1	-	PR317
Klebsiella pneumoniae	573	PRJDB5886	395173	Proteobacteria	Gammaproteobacteria	5.52076	57.2	-	BDQU01	2	5550	5201	7/19/17	8/23/17	Contig	"Hattori Laboratory, Department of Center for Omics and Bioinformatics, Graduate School of Frontier Sciences, The University of Tokyo"	SAMD00083913	GCA_002260725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/725/GCA_002260725.1_ASM226072v1	-	40B3
Klebsiella pneumoniae	573	PRJDB5884	395171	Proteobacteria	Gammaproteobacteria	5.53308	57.1	-	BDQS01	4	5529	5204	7/19/17	8/23/17	Contig	"Hattori Laboratory, Department of Center for Omics and Bioinformatics, Graduate School of Frontier Sciences, The University of Tokyo"	SAMD00083911	GCA_002260885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/885/GCA_002260885.1_ASM226088v1	-	3.40E+02
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.86142	38.9	-	NGEP01	70	3756	3617	5/15/17	5/23/17	Contig	JCVI	SAMN06837831	GCA_002138005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/005/GCA_002138005.1_ASM213800v1	-	PR382
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.5097	66.4	-	FRMH01	71	6249	6083	12/9/16	3/20/17	Contig	DTU	SAMEA2357408	GCA_900145585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/585/GCA_900145585.1_216	-	-
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07564	39.7	-	CRQE01	68	2287	2084	3/23/15	3/11/17	Contig	SC	SAMEA1024572	GCA_001193235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/235/GCA_001193235.1_6775_2_24	-	SMRU864
Escherichia coli	562	PRJNA304203	304203	Proteobacteria	Gammaproteobacteria	5.23729	50.3004	plasmid pSYAB1:NZ_CM003775.1/CM003775.1	LNUD01	106	5411	5067	2/17/16	2/25/17	Scaffold	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04296770	GCA_001562755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/755/GCA_001562755.1_ASM156275v1	-	SYAB2
Mycobacterium tuberculosis XTB13-172	1427252	PRJNA229648	229648	Terrabacteria group	Actinobacteria	4.42656	65.6	-	JLJR01	8	4312	4110	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419608	GCA_000681215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/215/GCA_000681215.1_Myco_tube_XTB13-172_V1	-	XTB13-172
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.93663	52.1	-	LHGZ01	134	5071	4812	8/5/15	2/28/17	Contig	FDA	SAMN03894170	GCA_001242345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/345/GCA_001242345.1_Salmonella_enterica_CVM_N45936_v1.0	-	CVM N45936
Staphylococcus aureus FVRH6022	1409601	PRJNA223921	223921	Terrabacteria group	Firmicutes	2.90217	32.9	-	JBJR01	40	3056	2873	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02381662	GCA_000558685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/685/GCA_000558685.1_Stap_aure_FVRH6022_V1	-	FVRH6022
Staphylococcus aureus KINW6019	1409603	PRJNA223923	223923	Terrabacteria group	Firmicutes	2.92939	32.9	-	JBJP01	34	3085	2894	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02381664	GCA_000558705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/705/GCA_000558705.1_Stap_aure_KINW6019_V1	-	KINW6019
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.02088	51.7	-	LHHA01	285	5115	4743	8/5/15	2/28/17	Contig	FDA	SAMN03894171	GCA_001242375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/375/GCA_001242375.1_Salmonella_enterica_CVM_N45937_v1.0	-	CVM N45937
Mycobacterium tuberculosis XTB13-175	1427254	PRJNA229650	229650	Terrabacteria group	Actinobacteria	4.41854	65.6	-	JLJP01	2	4300	4108	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419610	GCA_000681235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/235/GCA_000681235.1_Myco_tube_XTB13-175_V1	-	XTB13-175
Escherichia coli	562	PRJNA304203	304203	Proteobacteria	Gammaproteobacteria	4.81346	50.8	-	LNUK01	86	5008	4690	2/17/16	2/25/17	Scaffold	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04297176	GCA_001562765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/765/GCA_001562765.1_ASM156276v1	-	SYRS1
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07141	39.7	-	CRWB01	76	2296	2056	3/22/15	3/10/17	Contig	SC	SAMEA1025667	GCA_001193275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/275/GCA_001193275.1_6807_1_10	-	SMRU1570
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.50555	66.4	-	FRMJ01	80	6254	6085	12/9/16	3/20/17	Contig	DTU	SAMEA2357409	GCA_900145595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/595/GCA_900145595.1_217	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.02006	39	-	NGEQ01	124	3990	3779	5/15/17	5/23/17	Contig	JCVI	SAMN06837830	GCA_002138035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/035/GCA_002138035.1_ASM213803v1	-	PR383
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.44187	57.3	-	NLFF01	77	5528	5260	8/21/17	8/23/17	Contig	Zhejiang University	SAMN07251852	GCA_002261575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/575/GCA_002261575.1_ASM226157v1	-	L84
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.4829	57.2	-	NLFG01	51	5522	5228	8/21/17	8/23/17	Contig	Zhejiang University	SAMN07251853	GCA_002261585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/585/GCA_002261585.1_ASM226158v1	-	L86
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.05691	39	-	NGER01	177	3993	3768	5/15/17	6/15/17	Contig	JCVI	SAMN06837829	GCA_002138055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/055/GCA_002138055.1_ASM213805v1	-	PR384
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.50209	66.4	-	FRMK01	69	6253	6091	12/9/16	3/20/17	Contig	DTU	SAMEA2357410	GCA_900145605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/605/GCA_900145605.1_218	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.04526	39.7	-	CRTO01	52	2234	2022	3/23/15	3/4/17	Contig	SC	SAMEA1025239	GCA_001193475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/475/GCA_001193475.1_6805_4_3	-	SMRU1659
Escherichia coli	562	PRJNA304203	304203	Proteobacteria	Gammaproteobacteria	5.22935	50.3004	plasmid pSYAB1:NZ_CM003774.1/CM003774.1	LNUF01	117	5410	5058	2/17/16	2/25/17	Scaffold	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN04296772	GCA_001562815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/815/GCA_001562815.1_ASM156281v1	-	SYAB4
Mycobacterium tuberculosis XTB13-176	1427255	PRJNA229651	229651	Terrabacteria group	Actinobacteria	4.42361	65.6	-	JLJO01	13	4320	4113	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419611	GCA_000681255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/255/GCA_000681255.1_Myco_tube_XTB13-176_V1	-	XTB13-176
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.95376	52.1	-	LHHB01	146	5095	4835	8/5/15	2/28/17	Contig	FDA	SAMN03894172	GCA_001242395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/395/GCA_001242395.1_Salmonella_enterica_CVM_N45938_v1.0	-	CVM N45938
Staphylococcus aureus OCMM6071	1409604	PRJNA223924	223924	Terrabacteria group	Firmicutes	2.93404	32.7	-	JBJO01	16	3099	2931	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02381665	GCA_000558725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/725/GCA_000558725.1_Stap_aure_OCMM6071_V1	-	OCMM6071
Staphylococcus aureus UCIM6075	1409605	PRJNA223925	223925	Terrabacteria group	Firmicutes	2.89878	32.7	-	JBJN01	11	3055	2891	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02381666	GCA_000558745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/745/GCA_000558745.1_Stap_aure_UCIM6075_V1	-	UCIM6075
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.0214	51.8	-	LHHC01	159	5083	4757	8/5/15	2/28/17	Contig	FDA	SAMN03894173	GCA_001242405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/405/GCA_001242405.1_Salmonella_enterica_CVM_N45939_v1.0	-	CVM N45939
Mycobacterium tuberculosis XTB13-177	1427256	PRJNA229652	229652	Terrabacteria group	Actinobacteria	4.42998	65.6	-	JLJN01	2	4308	4107	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419612	GCA_000681275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/275/GCA_000681275.1_Myco_tube_XTB13-177_V1	-	XTB13-177
Escherichia coli	562	PRJNA268327	268327	Proteobacteria	Gammaproteobacteria	5.10947	50.5	-	LSNY01	142	5319	4975	2/17/16	2/25/17	Scaffold	The Genome Institute at Washington University	SAMN03838475	GCA_001562835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/835/GCA_001562835.1_ASM156283v1	-	JPH264
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.0699	39.6	-	CRJR01	64	2257	2034	3/23/15	3/4/17	Contig	SC	SAMEA1025576	GCA_001193675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/675/GCA_001193675.1_6753_3_14	-	SMRU1526
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.50051	66.4	-	FRMN01	112	6279	6087	12/9/16	3/20/17	Contig	DTU	SAMEA2357414	GCA_900145615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/615/GCA_900145615.1_220	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.88173	38.9	-	NGES01	79	3711	3567	5/15/17	6/15/17	Contig	JCVI	SAMN06837828	GCA_002138065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/065/GCA_002138065.1_ASM213806v1	-	PR385
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.48769	57.4	-	NLFH01	75	5641	5363	8/21/17	8/23/17	Contig	Zhejiang University	SAMN07251854	GCA_002261625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/625/GCA_002261625.1_ASM226162v1	-	L9
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.42434	57.3	-	NLFD01	65	5523	5255	8/21/17	8/23/17	Contig	Zhejiang University	SAMN07251850	GCA_002261685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/685/GCA_002261685.1_ASM226168v1	-	L8
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.17818	38.8	-	NGEV01	54	4056	3909	5/15/17	6/15/17	Contig	JCVI	SAMN06837825	GCA_002138105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/105/GCA_002138105.1_ASM213810v1	-	PR388
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.49887	66.4	-	FRMM01	73	6259	6092	12/9/16	3/20/17	Contig	DTU	SAMEA2357411	GCA_900145625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/625/GCA_900145625.1_219	-	-
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.17212	39.6	-	CRNF01	75	2406	2189	3/23/15	3/4/17	Contig	SC	SAMEA1024959	GCA_001193735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/735/GCA_001193735.1_6755_4_1	-	SMRU1129
Escherichia coli	562	PRJNA268326	268326	Proteobacteria	Gammaproteobacteria	5.2475	50.6	-	LSNZ01	183	5483	5181	2/17/16	2/25/17	Scaffold	The Genome Institute at Washington University	SAMN03838320	GCA_001562855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/855/GCA_001562855.1_ASM156285v1	-	JPH493
Mycobacterium tuberculosis XTB13-178	1427257	PRJNA229653	229653	Terrabacteria group	Actinobacteria	4.44792	65.6	-	JLJM01	24	4336	4132	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419613	GCA_000681295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/295/GCA_000681295.1_Myco_tube_XTB13-178_V1	-	XTB13-178
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.74729	52.2	-	LHHD01	88	4818	4581	8/5/15	2/28/17	Contig	FDA	SAMN03894174	GCA_001242445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/445/GCA_001242445.1_Salmonella_enterica_CVM_N45940_v1.0	-	CVM N45940
Staphylococcus aureus UCIM6077	1409606	PRJNA223926	223926	Terrabacteria group	Firmicutes	2.87595	32.8	-	JBJM01	23	2971	2839	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02381667	GCA_000558765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/765/GCA_000558765.1_Stap_aure_UCIM6077_V1	-	UCIM6077
Staphylococcus aureus MISS6134	1409607	PRJNA223927	223927	Terrabacteria group	Firmicutes	2.88883	32.8	-	JBJL01	17	3034	2863	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02381668	GCA_000558785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/785/GCA_000558785.1_Stap_aure_MISS6134_V1	-	MISS6134
Salmonella enterica subsp. enterica serovar Derby	28144	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.78645	52	-	LHHE01	160	4891	4615	8/5/15	2/28/17	Contig	FDA	SAMN03894175	GCA_001242475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/475/GCA_001242475.1_Salmonella_enterica_CVM_N45941_v1.0	-	CVM N45941
Mycobacterium tuberculosis XTB13-179	1427258	PRJNA229654	229654	Terrabacteria group	Actinobacteria	4.43301	65.6	-	JLJL01	7	4312	4102	4/30/14	3/9/17	Scaffold	Broad Institute	SAMN02419614	GCA_000681315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/315/GCA_000681315.1_Myco_tube_XTB13-179_V1	-	XTB13-179
Escherichia coli	562	PRJNA310408	310408	Proteobacteria	Gammaproteobacteria	4.80037	50.8	-	LRXG01	197	4997	4676	2/18/16	2/25/17	Scaffold	National Institute of Health Dr Ricardo Jorge	SAMN04452067	GCA_001563385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/385/GCA_001563385.1_ASM156338v1	27242699	LV46743
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.19256	39.8	-	CQZX01	103	2358	2066	3/22/15	3/15/17	Contig	SC	SAMEA1025086	GCA_001193755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/755/GCA_001193755.1_6730_6_17	-	SMRU689
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.50669	66.4	-	FRML01	86	6256	6090	12/9/16	3/20/17	Contig	DTU	SAMEA2357415	GCA_900145635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/635/GCA_900145635.1_221	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.08267	38.9	-	NGEU01	74	4005	3845	5/15/17	5/23/17	Contig	JCVI	SAMN06837826	GCA_002138115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/115/GCA_002138115.1_ASM213811v1	-	PR387
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.71799	57	-	NLEY01	91	5944	5610	8/21/17	8/23/17	Contig	Zhejiang University	SAMN07251845	GCA_002261735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/735/GCA_002261735.1_ASM226173v1	-	L61
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.5285	57.3	-	NLEX01	88	5707	5414	8/21/17	8/23/17	Contig	Zhejiang University	SAMN07251844	GCA_002261745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/745/GCA_002261745.1_ASM226174v1	-	L60
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.89048	38.9	-	NGEW01	50	3752	3620	5/15/17	5/23/17	Contig	JCVI	SAMN06837824	GCA_002138155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/155/GCA_002138155.1_ASM213815v1	-	PR389
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.50242	66.4	-	FRMO01	73	6250	6086	12/9/16	3/20/17	Contig	DTU	SAMEA2357416	GCA_900145645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/645/GCA_900145645.1_222	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.04921	39.6	-	CRJK01	43	2258	2036	3/22/15	3/10/17	Contig	SC	SAMEA1025248	GCA_001193995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/995/GCA_001193995.1_6753_2_18	-	SMRU1507
Escherichia coli	562	PRJNA310408	310408	Proteobacteria	Gammaproteobacteria	5.18035	50.8	-	LRXI01	136	5481	5147	2/18/16	2/25/17	Scaffold	National Institute of Health Dr Ricardo Jorge	SAMN04452068	GCA_001563395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/395/GCA_001563395.1_ASM156339v1	27242699	LV36464
Mycobacterium tuberculosis OFXR-9	1402586	PRJNA221504	221504	Terrabacteria group	Actinobacteria	4.40637	65.6	-	JLCF01	5	4297	4097	4/29/14	3/8/17	Scaffold	Broad Institute	SAMN02364079	GCA_000681335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/335/GCA_000681335.1_Myco_tube_OFXR-9_V1	-	OFXR-9
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.02403	51.7	-	LHHH01	148	5080	4757	8/5/15	2/28/17	Contig	FDA	SAMN03894178	GCA_001242495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/495/GCA_001242495.1_Salmonella_enterica_CVM_N45944_v1.0	-	CVM N45944
Staphylococcus aureus UCIM6080	1409609	PRJNA223929	223929	Terrabacteria group	Firmicutes	2.75326	32.7	-	JBJJ01	33	2870	2704	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02381670	GCA_000558805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/805/GCA_000558805.1_Stap_aure_UCIM6080_V1	-	UCIM6080
Staphylococcus aureus UCIM6076	1409610	PRJNA223930	223930	Terrabacteria group	Firmicutes	2.8747	32.8	-	JBJI01	22	3029	2853	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02381671	GCA_000558825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/825/GCA_000558825.1_Stap_aure_UCIM6076_V1	-	UCIM6076
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.71455	52.2	-	LHHF01	40	4793	4555	8/5/15	2/28/17	Contig	FDA	SAMN03894176	GCA_001242505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/505/GCA_001242505.1_Salmonella_enterica_CVM_N45942_v1.0	-	CVM N45942
Mycobacterium tuberculosis NRITLD28	1455302	PRJNA237424	237424	Terrabacteria group	Actinobacteria	4.41744	65.6	-	JJSF01	95	4345	4124	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02628517	GCA_000705705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/705/GCA_000705705.1_Myco_tube_NRITLD28_V1	-	NRITLD28
Escherichia coli	562	PRJNA310408	310408	Proteobacteria	Gammaproteobacteria	4.79821	50.8	-	LRXH01	197	4999	4674	2/18/16	2/25/17	Scaffold	National Institute of Health Dr Ricardo Jorge	SAMN04452064	GCA_001563405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/405/GCA_001563405.1_ASM156340v1	27242699	LV46221
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08645	39.6	-	CROS01	45	2294	2078	3/23/15	3/11/17	Contig	SC	SAMEA1025418	GCA_001194015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/015/GCA_001194015.1_6755_6_17	-	SMRU1194
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.78654	65.9	-	FRMR01	223	6546	6263	12/9/16	3/20/17	Contig	DTU	SAMEA2357417	GCA_900145655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/655/GCA_900145655.1_223	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.00545	39	-	NGEX01	131	3984	3771	5/15/17	5/23/17	Contig	JCVI	SAMN06837823	GCA_002138165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/165/GCA_002138165.1_ASM213816v1	-	PR390
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.50845	57.2	-	NLES01	64	5628	5342	8/21/17	8/23/17	Contig	Zhejiang University	SAMN07251839	GCA_002261815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/815/GCA_002261815.1_ASM226181v1	-	L528
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.81895	57	-	NLEU01	128	6050	5689	8/21/17	8/23/17	Contig	Zhejiang University	SAMN07251841	GCA_002261825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/825/GCA_002261825.1_ASM226182v1	-	L531
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.76028	38.8	-	NGEY01	31	3604	3479	5/15/17	5/23/17	Contig	JCVI	SAMN06837822	GCA_002138175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/175/GCA_002138175.1_ASM213817v1	-	PR391
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.4242	66.4	-	FRMP01	67	6089	5936	12/9/16	3/20/17	Contig	DTU	SAMEA2357418	GCA_900145665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/665/GCA_900145665.1_224	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10301	39.5	-	CRKR01	59	2318	2099	3/23/15	3/11/17	Contig	SC	SAMEA1025396	GCA_001194185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/185/GCA_001194185.1_6753_4_17	-	SMRU1553
Escherichia coli	562	PRJNA310408	310408	Proteobacteria	Gammaproteobacteria	5.15399	50.8	-	LRXJ01	204	5451	5108	2/18/16	2/25/17	Scaffold	National Institute of Health Dr Ricardo Jorge	SAMN04452069	GCA_001563415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/563/415/GCA_001563415.1_ASM156341v1	27242699	LV27950
Mycobacterium tuberculosis TKK_05SA_0024	1448537	PRJNA235542	235542	Terrabacteria group	Actinobacteria	4.42326	65.6	-	JJVR01	86	4333	4136	6/12/14	3/9/17	Scaffold	Broad Institute	SAMN02586032	GCA_000705725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/725/GCA_000705725.1_Myco_tube_TKK_05SA_0024_V1	-	TKK_05SA_0024
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.69695	52.2	-	LHHG01	63	4768	4523	8/5/15	2/28/17	Contig	FDA	SAMN03894177	GCA_001242545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/545/GCA_001242545.1_Salmonella_enterica_CVM_N45943_v1.0	-	CVM N45943
Staphylococcus aureus WMCA6015	1409611	PRJNA223931	223931	Terrabacteria group	Firmicutes	2.90256	32.7	-	JBJH01	11	3066	2893	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02381672	GCA_000558845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/845/GCA_000558845.1_Stap_aure_WMCA6015_V1	-	WMCA6015
Staphylococcus aureus FVRH6129	1409710	PRJNA224032	224032	Terrabacteria group	Firmicutes	2.90653	32.9	-	JBGC01	53	3078	2887	2/4/14	3/3/17	Scaffold	Broad Institute	SAMN02381771	GCA_000558865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/865/GCA_000558865.1_Stap_aure_FVRH6129_V1	-	FVRH6129
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.94879	52.1	-	LHHK01	71	5056	4806	8/5/15	2/28/17	Contig	FDA	SAMN03894181	GCA_001242565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/565/GCA_001242565.1_Salmonella_enterica_CVM_N45950_v1.0	-	CVM N45950
Mycobacterium tuberculosis TKK_05MA_0055	1448519	PRJNA235524	235524	Terrabacteria group	Actinobacteria	4.42441	65.6	-	JJWI01	68	4346	4141	6/12/14	3/9/17	Scaffold	Broad Institute	SAMN02586014	GCA_000705745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/745/GCA_000705745.1_Myco_tube_TKK_05MA_0055_V1	-	TKK_05MA_0055
Escherichia coli	562	PRJNA307659	307659	Proteobacteria	Gammaproteobacteria	5.58537	50.4	-	LQWX02	178	5929	5501	4/1/16	2/26/17	Scaffold	University of Madras	SAMN04384259	GCA_001605825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/825/GCA_001605825.2_ASM160582v2	-	LF236
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10856	39.6	-	CRWW01	40	2298	2104	3/23/15	3/10/17	Contig	SC	SAMEA1025417	GCA_001194305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/305/GCA_001194305.1_6807_2_13	-	SMRU1597
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.42315	66.4	-	FRMQ01	65	6086	5931	12/9/16	3/20/17	Contig	DTU	SAMEA2357419	GCA_900145675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/675/GCA_900145675.1_225	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.88089	38.8	-	NGEZ01	68	3782	3648	5/15/17	5/23/17	Contig	JCVI	SAMN06837821	GCA_002138215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/215/GCA_002138215.1_ASM213821v1	-	PR392
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.53066	57.2	-	NLEV01	101	5650	5355	8/21/17	8/23/17	Contig	Zhejiang University	SAMN07251842	GCA_002261855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/855/GCA_002261855.1_ASM226185v1	-	L535
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.79305	56.9	-	NLET01	148	6034	5664	8/21/17	8/23/17	Contig	Zhejiang University	SAMN07251840	GCA_002261875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/875/GCA_002261875.1_ASM226187v1	-	L529
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.01338	39	-	NGFB01	121	3975	3776	5/15/17	5/23/17	Contig	JCVI	SAMN06837819	GCA_002138245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/245/GCA_002138245.1_ASM213824v1	-	PR394
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.42366	66.4	-	FRMS01	67	6093	5937	12/9/16	3/20/17	Contig	DTU	SAMEA2357420	GCA_900145685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/685/GCA_900145685.1_226	-	-
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.14527	39.7	-	CMTX01	99	2314	2012	3/23/15	3/10/17	Contig	SC	SAMEA1022937	GCA_001194405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/405/GCA_001194405.1_5737_3_4	-	208_80
Escherichia coli	562	PRJNA324008	324008	Proteobacteria	Gammaproteobacteria	5.03918	50.5945	plasmid pNGF3_pCol_let_like:NZ_CM004490.1/CM004490.1	LYXX01	89	5173	4826	7/11/16	2/25/17	Scaffold	Harvard University	SAMN05194387	GCA_001683575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/575/GCA_001683575.1_NGF4	-	NGF4
Mycobacterium tuberculosis TKK_03_0102	1448436	PRJNA235441	235441	Terrabacteria group	Actinobacteria	4.41403	65.6	-	JJYY01	71	4331	4129	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02585931	GCA_000705765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/765/GCA_000705765.1_Myco_tube_TKK_03_0102_V1	-	TKK_03_0102
Salmonella enterica subsp. enterica serovar Brandenburg	149387	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.93742	52	-	LHHJ01	55	5033	4763	8/5/15	2/28/17	Contig	FDA	SAMN03894180	GCA_001242575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/575/GCA_001242575.1_Salmonella_enterica_CVM_N45949_v1.0	-	CVM N45949
Staphylococcus aureus W25097	1410684	PRJNA224314	224314	Terrabacteria group	Firmicutes	2.83235	32.8	-	JDGV01	32	2997	2828	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383604	GCA_000559165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/165/GCA_000559165.1_Stap_aure_W25097_V1	-	W25097
Staphylococcus aureus M81424	1410685	PRJNA224315	224315	Terrabacteria group	Firmicutes	2.77923	32.8	-	JDGW01	44	2884	2745	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383605	GCA_000559185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/185/GCA_000559185.1_Stap_aure_M81424_V1	-	M81424
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.85601	52.1	-	LHHI01	46	4999	4770	8/5/15	2/28/17	Contig	FDA	SAMN03894179	GCA_001242585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/585/GCA_001242585.1_Salmonella_enterica_CVM_N45945_v1.0	-	CVM N45945
Mycobacterium tuberculosis 2542MS	1438869	PRJNA233375	233375	Terrabacteria group	Actinobacteria	4.40874	65.6	-	JKAX01	88	4331	4118	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02567723	GCA_000705785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/785/GCA_000705785.1_Myco_tube_2542MS_V1	-	2542MS
Escherichia coli	562	PRJNA335700	335700	Proteobacteria	Gammaproteobacteria	5.23623	50.7	-	MCBU01	351	5698	5118	8/10/16	2/25/17	Scaffold	National Institute of Health Doutor Ricardo Jorge	SAMN05450382	GCA_001703435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/703/435/GCA_001703435.1_ASM170343v1	-	LV13072
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.17756	39.6	-	CRRY01	48	2373	2153	3/22/15	3/11/17	Contig	SC	SAMEA1025653	GCA_001194485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/485/GCA_001194485.1_6805_2_13	-	SMRU1429
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.42507	66.4	-	FRMT01	86	6105	5927	12/9/16	3/20/17	Contig	DTU	SAMEA2357421	GCA_900145695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/695/GCA_900145695.1_227	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.83958	38.9	-	NGFC01	134	3760	3600	5/15/17	5/23/17	Contig	JCVI	SAMN06837818	GCA_002138295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/295/GCA_002138295.1_ASM213829v1	-	PR395
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.52734	57.2	-	NLER01	102	5643	5350	8/21/17	8/23/17	Contig	Zhejiang University	SAMN07251838	GCA_002261895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/895/GCA_002261895.1_ASM226189v1	-	L527
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.51211	57.2	-	NLEP01	69	5636	5347	8/21/17	8/23/17	Contig	Zhejiang University	SAMN07251836	GCA_002261915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/915/GCA_002261915.1_ASM226191v1	-	L520
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.90502	39	-	NGFE01	103	3775	3626	5/15/17	5/23/17	Contig	JCVI	SAMN06837816	GCA_002138305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/305/GCA_002138305.1_ASM213830v1	-	PR398
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.42186	66.4	-	FRMU01	83	6104	5932	12/9/16	3/20/17	Contig	DTU	SAMEA2357422	GCA_900145705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/705/GCA_900145705.1_228	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12819	39.5	-	CRUB01	53	2338	2114	3/23/15	3/10/17	Contig	SC	SAMEA1025579	GCA_001194645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/645/GCA_001194645.1_6805_5_19	-	SMRU1699
Escherichia coli	562	PRJNA322697	322697	Proteobacteria	Gammaproteobacteria	5.08492	50.6951	plasmid pEC47a:NZ_CM004622.1/CM004622.1	LYPE01	102	5342	4944	8/21/16	2/25/17	Scaffold	University of Sao Paulo	SAMN05172540	GCA_001708145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/708/145/GCA_001708145.1_ASM170814v1	-	Ec47VL
Mycobacterium tuberculosis 2092HD	1438847	PRJNA233372	233372	Terrabacteria group	Actinobacteria	4.40622	65.6	-	JKBA01	85	4328	4119	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02567720	GCA_000705805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/805/GCA_000705805.1_Myco_tube_2092HD_V1	-	2092HD
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.97434	51.9	-	LHHN01	71	5084	4841	8/5/15	2/28/17	Contig	FDA	SAMN03894184	GCA_001242655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/655/GCA_001242655.1_Salmonella_enterica_CVM_N45953_v1.0	-	CVM N45953
Staphylococcus aureus M81490	1410686	PRJNA224316	224316	Terrabacteria group	Firmicutes	2.89008	32.8	-	JDGX01	30	3022	2880	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383606	GCA_000559205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/205/GCA_000559205.1_Stap_aure_M81490_V1	-	M81490
Staphylococcus aureus M81493	1410687	PRJNA224317	224317	Terrabacteria group	Firmicutes	2.88959	32.8	-	JDGY01	92	3049	2868	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383607	GCA_000559225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/225/GCA_000559225.1_Stap_aure_M81493_V1	-	M81493
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.7973	52.1	-	LHHM01	52	4915	4668	8/5/15	2/28/17	Contig	FDA	SAMN03894183	GCA_001242665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/665/GCA_001242665.1_Salmonella_enterica_CVM_N45952_v1.0	-	CVM N45952
Mycobacterium tuberculosis 2995AB	1438871	PRJNA233367	233367	Terrabacteria group	Actinobacteria	4.39139	65.6	-	JKBE01	91	4336	4118	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02567715	GCA_000705825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/825/GCA_000705825.1_Myco_tube_2995AB_V1	-	2995AB
Escherichia coli	562	PRJNA322664	322664	Proteobacteria	Gammaproteobacteria	5.30728	50.2486	plasmid pICBEC7Pmcr:NZ_CP017246.1/CP017246.1	MJAL01	238	5698	5174	1/5/17	2/26/17	Scaffold	Universidade de Sao Paulo	SAMN05729964	GCA_001747365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/747/365/GCA_001747365.2_ASM174736v2	-	ICBEC7P
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12735	39.7	-	CROL01	55	2315	2095	3/23/15	3/11/17	Contig	SC	SAMEA1025420	GCA_001194685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/685/GCA_001194685.1_6755_5_4	-	SMRU1156
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.4222	66.4	-	FRMV01	95	6111	5930	12/9/16	3/20/17	Contig	DTU	SAMEA2357423	GCA_900145715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/715/GCA_900145715.1_229	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.88873	38.9	-	NGFD01	126	3802	3634	5/15/17	5/23/17	Contig	JCVI	SAMN06837817	GCA_002138315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/315/GCA_002138315.1_ASM213831v1	-	PR396
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.4265	57.3	-	NLEQ01	73	5530	5257	8/21/17	8/23/17	Contig	Zhejiang University	SAMN07251837	GCA_002261935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/935/GCA_002261935.1_ASM226193v1	-	L526
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.42274	57.3	-	NLEO01	66	5524	5256	8/21/17	8/23/17	Contig	Zhejiang University	SAMN07251835	GCA_002261945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/945/GCA_002261945.1_ASM226194v1	-	L519
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.15453	39	-	NGFF01	106	4120	3957	5/15/17	5/23/17	Contig	JCVI	SAMN06837815	GCA_002138345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/345/GCA_002138345.1_ASM213834v1	-	PR399
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.42335	66.4	-	FRMZ01	90	6103	5924	12/9/16	3/20/17	Contig	DTU	SAMEA2357425	GCA_900145725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/725/GCA_900145725.1_235	-	-
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.0867	39.4	-	CRQI01	92	2335	2101	3/23/15	3/11/17	Contig	SC	SAMEA1024907	GCA_001194845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/845/GCA_001194845.1_6775_2_7	-	SMRU847
Escherichia coli	562	PRJNA255742	255742	Proteobacteria	Gammaproteobacteria	4.97513	50.7	-	JPQR01	137	5208	4845	10/18/16	2/25/17	Scaffold	BGI	SAMN02928420	GCA_001816285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/285/GCA_001816285.1_ASM181628v1	-	LCT-ECG001
Mycobacterium tuberculosis 2097HD	1438850	PRJNA233366	233366	Terrabacteria group	Actinobacteria	4.45634	65.6	-	JKBF01	113	4402	4150	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02567714	GCA_000705845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/845/GCA_000705845.1_Myco_tube_2097HD_V1	-	2097HD
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91345	52.1	-	LHHO01	72	5059	4811	8/5/15	2/28/17	Contig	FDA	SAMN03894185	GCA_001242675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/675/GCA_001242675.1_Salmonella_enterica_CVM_N45954_v1.0	-	CVM N45954
Staphylococcus aureus T45974	1410688	PRJNA224318	224318	Terrabacteria group	Firmicutes	3.00686	32.9	-	JDGZ01	49	3182	3000	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383608	GCA_000559245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/245/GCA_000559245.1_Stap_aure_T45974_V1	-	T45974
Staphylococcus aureus W28469	1410689	PRJNA224319	224319	Terrabacteria group	Firmicutes	2.82021	32.7	-	JDHA01	23	2941	2809	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383609	GCA_000559265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/265/GCA_000559265.1_Stap_aure_W28469_V1	-	W28469
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.78398	52	-	LHHS01	57	4866	4634	8/5/15	2/28/17	Contig	FDA	SAMN03894189	GCA_001242755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/755/GCA_001242755.1_Salmonella_enterica_CVM_N45958_v1.0	-	CVM N45958
Mycobacterium tuberculosis 2231BH	1438861	PRJNA233352	233352	Terrabacteria group	Actinobacteria	4.45326	65.6	-	JKBT01	95	4381	4168	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02567700	GCA_000705865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/865/GCA_000705865.1_Myco_tube_2231BH_V1	-	2231BH
Escherichia coli	562	PRJNA255741	255741	Proteobacteria	Gammaproteobacteria	4.96106	50.6	-	JPQS01	131	5152	4781	10/18/16	2/25/17	Scaffold	BGI	SAMN02928419	GCA_001816295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/295/GCA_001816295.1_ASM181629v1	-	LCT-ECM001
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.16274	39.6	-	CRFO01	51	2362	2152	3/23/15	3/10/17	Contig	SC	SAMEA1025111	GCA_001194865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/865/GCA_001194865.1_6736_4_20	-	SMRU1220
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.41922	66.4	-	FRMX01	67	6087	5935	12/9/16	3/20/17	Contig	DTU	SAMEA2357427	GCA_900145735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/735/GCA_900145735.1_239	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.18956	39	-	NGFG01	80	4130	3981	5/15/17	5/23/17	Contig	JCVI	SAMN06837814	GCA_002138375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/138/375/GCA_002138375.1_ASM213837v1	-	PR400
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.81039	57	-	NLEM01	119	6055	5691	8/21/17	8/23/17	Contig	Zhejiang University	SAMN07251833	GCA_002261975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/975/GCA_002261975.1_ASM226197v1	-	L513
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.56701	57.3	-	NLEK01	92	5732	5443	8/21/17	8/23/17	Contig	Zhejiang University	SAMN07251831	GCA_002261985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/985/GCA_002261985.1_ASM226198v1	-	L505
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.79177	38.9	-	NGDZ01	24	3646	3536	5/15/17	5/23/17	Contig	JCVI	SAMN06837749	GCA_002142735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/735/GCA_002142735.1_ASM214273v1	-	PR336
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.42423	66.4	-	FRMY01	71	6094	5937	12/9/16	3/20/17	Contig	DTU	SAMEA2357426	GCA_900145745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/745/GCA_900145745.1_237	-	-
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.21017	39.4	-	CRQM01	83	2425	2194	3/22/15	3/4/17	Contig	SC	SAMEA1025022	GCA_001195005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/005/GCA_001195005.1_6791_6_10	-	SMRU634
Escherichia coli	562	PRJNA255743	255743	Proteobacteria	Gammaproteobacteria	4.96945	50.7	-	JPRV01	133	5196	4853	10/18/16	2/26/17	Scaffold	BGI	SAMN02928421	GCA_001816315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/315/GCA_001816315.1_ASM181631v1	-	LCT-ECS001
Mycobacterium tuberculosis BTB13-001	1423569	PRJNA229350	229350	Terrabacteria group	Actinobacteria	4.43254	65.6	-	JKCE01	2	4307	4109	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02414985	GCA_000705885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/885/GCA_000705885.1_Myco_tube_BTB13-001_V1	-	BTB13-001
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.96435	52.1	-	LHHP01	61	5152	4827	8/5/15	2/28/17	Contig	FDA	SAMN03894186	GCA_001242765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/765/GCA_001242765.1_Salmonella_enterica_CVM_N45955_v1.0	-	CVM N45955
Staphylococcus aureus F41886	1410690	PRJNA224320	224320	Terrabacteria group	Firmicutes	2.89036	32.7	-	JDHB01	34	3028	2893	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383610	GCA_000559285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/285/GCA_000559285.1_Stap_aure_F41886_V1	-	F41886
Staphylococcus aureus F41906	1410691	PRJNA224321	224321	Terrabacteria group	Firmicutes	2.86559	32.8	-	JDHC01	60	2983	2846	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383611	GCA_000559305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/305/GCA_000559305.1_Stap_aure_F41906_V1	-	F41906
Salmonella enterica subsp. enterica serovar Mbandaka	192954	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.76061	52.1	-	LHHR01	62	4864	4617	8/5/15	2/28/17	Contig	FDA	SAMN03894188	GCA_001242775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/775/GCA_001242775.1_Salmonella_enterica_CVM_N45957_v1.0	-	CVM N45957
Mycobacterium tuberculosis BTB10-305	1423524	PRJNA229305	229305	Terrabacteria group	Actinobacteria	4.40595	65.6	-	JKDX01	10	4290	4122	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02414940	GCA_000705905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/905/GCA_000705905.1_Myco_tube_BTB10-305_V1	-	BTB10-305
Escherichia coli	562	PRJNA341933	341933	Proteobacteria	Gammaproteobacteria	5.18794	50.9	-	MIIH01	4	5362	4970	11/3/16	4/17/17	Scaffold	Karolinska Institute	SAMN05730650	GCA_001865895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/895/GCA_001865895.1_ASM186589v1	28126929	Tob1
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14039	39.5	-	CRNA01	56	2371	2139	3/23/15	3/4/17	Contig	SC	SAMEA1024560	GCA_001195445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/445/GCA_001195445.1_6755_3_4	-	SMRU868
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.42265	66.4	-	FRMW01	71	6089	5933	12/9/16	3/20/17	Contig	DTU	SAMEA2357429	GCA_900145755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/755/GCA_900145755.1_240	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.03457	39	-	NGFX01	183	4020	3795	5/16/17	5/24/17	Contig	JCVI	SAMN06892292	GCA_002142935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/935/GCA_002142935.1_ASM214293v1	-	ARLG1849
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.51225	57.2	-	NLEN01	68	5639	5350	8/21/17	8/23/17	Contig	Zhejiang University	SAMN07251834	GCA_002262015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/015/GCA_002262015.1_ASM226201v1	-	L514
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.81278	57	-	NLEL01	119	6057	5688	8/21/17	8/23/17	Contig	Zhejiang University	SAMN07251832	GCA_002262035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/035/GCA_002262035.1_ASM226203v1	-	L511
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.98033	39	-	NGFV01	122	3899	3674	5/16/17	5/24/17	Contig	JCVI	SAMN06892294	GCA_002142945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/945/GCA_002142945.1_ASM214294v1	-	ARLG1846
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.4192	66.4	-	FRNA01	81	6098	5925	12/9/16	3/20/17	Contig	DTU	SAMEA2357430	GCA_900145765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/765/GCA_900145765.1_241	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.24138	39.5	-	CRWH01	98	2484	2243	3/23/15	3/11/17	Contig	SC	SAMEA1025477	GCA_001195985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/985/GCA_001195985.1_6807_1_16	-	SMRU1576
Escherichia coli	562	PRJNA341936	341936	Proteobacteria	Gammaproteobacteria	5.44304	50.6	-	MIIL01	6	5565	5174	11/3/16	4/17/17	Scaffold	Karolinska Institute	SAMN05730657	GCA_001865905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/905/GCA_001865905.1_ASM186590v1	28126929	ECOR31
Mycobacterium tuberculosis BTB08-395	1423495	PRJNA229276	229276	Terrabacteria group	Actinobacteria	4.41164	65.5	-	JKFA01	8	4293	4112	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02414911	GCA_000705925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/925/GCA_000705925.1_Myco_tube_BTB08-395_V1	-	BTB08-395
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.08905	51.8	-	LHHU01	61	5221	4972	8/5/15	2/28/17	Contig	FDA	SAMN03894192	GCA_001242865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/865/GCA_001242865.1_Salmonella_enterica_CVM_N46812_v1.0	-	CVM N46812
Staphylococcus aureus F41913	1410692	PRJNA224322	224322	Terrabacteria group	Firmicutes	2.82207	32.8	-	JDHD01	45	2969	2790	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383612	GCA_000559325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/325/GCA_000559325.1_Stap_aure_F41913_V1	-	F41913
Staphylococcus aureus F41882	1410693	PRJNA224323	224323	Terrabacteria group	Firmicutes	2.69878	32.7	-	JDHE01	38	2795	2632	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383613	GCA_000559345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/345/GCA_000559345.1_Stap_aure_F41882_V1	-	F41882
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.71634	52.2	-	LHHV01	58	4813	4577	8/5/15	2/28/17	Contig	FDA	SAMN03894193	GCA_001242875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/875/GCA_001242875.1_Salmonella_enterica_CVM_N46813_v1.0	-	CVM N46813
Mycobacterium tuberculosis BTB07-327	1423477	PRJNA229258	229258	Terrabacteria group	Actinobacteria	4.43084	65.5	-	JKFR01	8	4307	4089	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02414893	GCA_000705945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/945/GCA_000705945.1_Myco_tube_BTB07-327_V1	-	BTB07-327
Escherichia coli	562	PRJNA354790	354790	Proteobacteria	Gammaproteobacteria	4.97488	50.7	-	MQME01	261	5301	4837	12/9/16	2/26/17	Scaffold	Centro de Pesquisas Aggeu Magalhaes - FIOCRUZ - Brazil	SAMN06051286	GCA_001899625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/625/GCA_001899625.1_ASM189962v1	-	C153
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.21578	39.4	-	CQWX01	165	2413	2195	3/23/15	3/11/17	Contig	SC	SAMEA1024841	GCA_001196105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/105/GCA_001196105.1_6714_7_4	-	SMRU748
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.42269	66.4	-	FRNC01	109	6122	5925	12/9/16	3/20/17	Contig	DTU	SAMEA2357432	GCA_900145775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/775/GCA_900145775.1_242	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.01406	39	-	NGFY01	125	3981	3782	5/16/17	5/23/17	Contig	JCVI	SAMN06892290	GCA_002142955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/955/GCA_002142955.1_ASM214295v1	-	ARLG1851
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.54993	57.3	-	NLEG01	101	5725	5433	8/21/17	8/23/17	Contig	Zhejiang University	SAMN07251827	GCA_002262055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/055/GCA_002262055.1_ASM226205v1	-	L48
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.77061	57	-	NLEH01	115	6048	5677	8/21/17	8/23/17	Contig	Zhejiang University	SAMN07251828	GCA_002262065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/065/GCA_002262065.1_ASM226206v1	-	L482
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.92721	38.8	-	NGFS01	75	3834	3698	5/16/17	5/23/17	Contig	JCVI	SAMN06892297	GCA_002142995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/995/GCA_002142995.1_ASM214299v1	-	ARLG1842
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.4203	66.4	-	FRNB01	108	6118	5906	12/9/16	3/20/17	Contig	DTU	SAMEA2357433	GCA_900145785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/785/GCA_900145785.1_243	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.1479	39.5	-	CRWF01	39	2385	2152	3/23/15	3/11/17	Contig	SC	SAMEA1025487	GCA_001196375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/375/GCA_001196375.1_6807_1_15	-	SMRU1575
Escherichia coli	562	PRJNA342143	342143	Proteobacteria	Gammaproteobacteria	5.27686	50.8	-	MIGD01	8	5495	4973	12/12/16	2/26/17	Scaffold	University of Pittsburgh School of Medicine	SAMN05736413	GCA_001901545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/545/GCA_001901545.1_ASM190154v1	-	YDC774
Mycobacterium tuberculosis BTB07-314	1423473	PRJNA229254	229254	Terrabacteria group	Actinobacteria	4.38176	65.6	-	JKFV01	71	4313	4102	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02414889	GCA_000705965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/965/GCA_000705965.1_Myco_tube_BTB07-314_V1	-	BTB07-314
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.89132	52.1	-	LHHT01	53	5000	4762	8/5/15	2/28/17	Contig	FDA	SAMN03894191	GCA_001242885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/885/GCA_001242885.1_Salmonella_enterica_CVM_N46811_v1.0	-	CVM N46811
Staphylococcus aureus M85201	1410695	PRJNA224325	224325	Terrabacteria group	Firmicutes	2.85584	32.7	-	JDHF01	24	2995	2859	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383615	GCA_000559365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/365/GCA_000559365.1_Stap_aure_M85201_V1	-	M85201
Staphylococcus aureus T49441	1410696	PRJNA224326	224326	Terrabacteria group	Firmicutes	2.78944	32.8	-	JDHG01	51	2904	2765	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383616	GCA_000559385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/385/GCA_000559385.1_Stap_aure_T49441_V1	-	T49441
Salmonella enterica subsp. enterica serovar Liverpool	216804	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.75054	52.2	-	LHHW01	44	4782	4557	8/5/15	2/28/17	Contig	FDA	SAMN03894194	GCA_001242905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/905/GCA_001242905.1_Salmonella_enterica_CVM_N46814_v1.0	-	CVM N46814
Mycobacterium tuberculosis BTB07-234	1423464	PRJNA229245	229245	Terrabacteria group	Actinobacteria	4.40107	65.5	-	JKGE01	5	4275	4088	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02414880	GCA_000705985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/985/GCA_000705985.1_Myco_tube_BTB07-234_V1	-	BTB07-234
Escherichia coli	562	PRJNA354228	354228	Proteobacteria	Gammaproteobacteria	5.77044	50.5	-	MRDN01	70	5774	5325	12/18/16	2/26/17	Scaffold	Instituto de Quimica	SAMN06043562	GCA_001907935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/935/GCA_001907935.1_ASM190793v1	-	HC891/2016
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08664	39.7	-	CROZ01	54	2295	2085	3/22/15	3/4/17	Contig	SC	SAMEA1025167	GCA_001196475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/475/GCA_001196475.1_6755_6_21	-	SMRU1198
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.42134	66.4	-	FRNE01	131	6139	5909	12/9/16	3/20/17	Contig	DTU	SAMEA2357434	GCA_900145795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/795/GCA_900145795.1_244	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.02631	39	-	NGGC01	147	4006	3772	5/16/17	5/24/17	Contig	JCVI	SAMN06892285	GCA_002143015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/015/GCA_002143015.1_ASM214301v1	-	ARLG1857
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.84963	56.9	-	NLEI01	143	6165	5781	8/21/17	8/23/17	Contig	Zhejiang University	SAMN07251829	GCA_002262075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/075/GCA_002262075.1_ASM226207v1	-	L491
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.42374	57.3	-	NLEJ01	69	5525	5255	8/21/17	8/23/17	Contig	Zhejiang University	SAMN07251830	GCA_002262115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/115/GCA_002262115.1_ASM226211v1	-	L50
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.00562	39	-	NGFR01	134	3971	3766	5/16/17	5/24/17	Contig	JCVI	SAMN06892299	GCA_002143035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/035/GCA_002143035.1_ASM214303v1	-	ARLG1841
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.41653	66.4	-	FRND01	154	6157	5923	12/9/16	3/20/17	Contig	DTU	SAMEA2357435	GCA_900145805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/805/GCA_900145805.1_245	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.1464	39.5	-	CQUM01	51	2370	2132	3/23/15	3/4/17	Contig	SC	SAMEA1025547	GCA_001196595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/595/GCA_001196595.1_6710_6_18	-	SMRU1362
Escherichia coli	562	PRJNA357632	357632	Proteobacteria	Gammaproteobacteria	5.32839	50.6	-	MSDR01	186	5572	5130	12/20/16	2/26/17	Scaffold	University of Colorado - Boulder	SAMN06146287	GCA_001910475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/475/GCA_001910475.1_ASM191047v1	-	CUS2B
Mycobacterium tuberculosis BTB04-120	1423427	PRJNA229208	229208	Terrabacteria group	Actinobacteria	4.47404	65.5	-	JKHN01	40	4351	4148	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02414843	GCA_000706005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/005/GCA_000706005.1_Myco_tube_BTB04-120_V1	-	BTB04-120
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.71035	52.1	-	LHHY01	47	4777	4547	8/5/15	2/28/17	Contig	FDA	SAMN03894197	GCA_001242965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/965/GCA_001242965.1_Salmonella_enterica_CVM_N46818_v1.0	-	CVM N46818
Staphylococcus aureus W31936	1410697	PRJNA224327	224327	Terrabacteria group	Firmicutes	2.85534	32.8	-	JDHH01	87	2995	2838	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383617	GCA_000559405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/405/GCA_000559405.1_Stap_aure_W31936_V1	-	W31936
Staphylococcus aureus W31852	1410699	PRJNA224329	224329	Terrabacteria group	Firmicutes	2.82031	32.8	-	JDHI01	53	2944	2816	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383619	GCA_000559425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/425/GCA_000559425.1_Stap_aure_W31852_V1	-	W31852
Salmonella enterica subsp. enterica serovar Johannesburg	913076	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.67718	52.2	-	LHHX01	181	4866	4548	8/5/15	2/28/17	Contig	FDA	SAMN03894195	GCA_001242975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/975/GCA_001242975.1_Salmonella_enterica_CVM_N46815_v1.0	-	CVM N46815
Mycobacterium tuberculosis M2898	1448835	PRJNA235847	235847	Terrabacteria group	Actinobacteria	4.40646	65.6	-	JKHT01	73	4322	4117	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02599181	GCA_000706025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/025/GCA_000706025.1_Myco_tube_M2898_V1	-	M2898
Escherichia coli	562	PRJNA275713	275713	Proteobacteria	Gammaproteobacteria	5.30375	50.5	-	LAZA01	169	5683	5248	1/5/17	2/26/17	Scaffold	University of Copenhagen	SAMN03352307	GCA_001937255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/255/GCA_001937255.1_ASM193725v1	-	R7AC
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.18063	39.6	-	CRQP01	64	2416	2181	3/22/15	3/4/17	Contig	SC	SAMEA1025012	GCA_001196875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/875/GCA_001196875.1_6791_6_11	-	SMRU635
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.42086	66.4	-	FRNH01	159	6157	5883	12/9/16	3/20/17	Contig	DTU	SAMEA2357436	GCA_900145815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/815/GCA_900145815.1_246	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.04752	39	-	NGFT01	135	4015	3799	5/16/17	5/23/17	Contig	JCVI	SAMN06892296	GCA_002143045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/045/GCA_002143045.1_ASM214304v1	-	ARLG1843
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.71018	57.1	-	NLEE01	88	5927	5582	8/21/17	8/23/17	Contig	Zhejiang University	SAMN07251825	GCA_002262135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/135/GCA_002262135.1_ASM226213v1	-	L451
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.40643	57.3	-	NLED01	53	5500	5236	8/21/17	8/23/17	Contig	Zhejiang University	SAMN07251824	GCA_002262145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/145/GCA_002262145.1_ASM226214v1	-	L447
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.03774	39	-	NGFU01	136	4004	3793	5/16/17	5/23/17	Contig	JCVI	SAMN06892295	GCA_002143095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/095/GCA_002143095.1_ASM214309v1	-	ARLG1845
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.41762	66.4	-	FRNF01	121	6132	5921	12/9/16	3/20/17	Contig	DTU	SAMEA2357437	GCA_900145825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/825/GCA_900145825.1_247	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.11378	39.5	-	CQVJ01	48	2319	2094	3/22/15	3/4/17	Contig	SC	SAMEA1025142	GCA_001196915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/915/GCA_001196915.1_6710_7_24	-	SMRU1392
Escherichia coli	562	PRJNA358017	358017	Proteobacteria	Gammaproteobacteria	5.23087	50.5	-	MSEK01	326	5552	5161	1/9/17	2/26/17	Scaffold	"Austrian Agency for Health and Food Safety, Vienna, Austria"	SAMN06163642	GCA_001940485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/485/GCA_001940485.1_ASM194048v1	-	204965
Mycobacterium tuberculosis H1964	1448831	PRJNA235843	235843	Terrabacteria group	Actinobacteria	4.42116	65.6	-	JKHW01	93	4358	4122	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02599177	GCA_000706045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/045/GCA_000706045.1_Myco_tube_H1964_V1	-	H1964
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.85842	52.3	-	LHHZ01	73	4972	4720	8/5/15	2/28/17	Contig	FDA	SAMN03894198	GCA_001242985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/985/GCA_001242985.1_Salmonella_enterica_CVM_N46819_v1.0	-	CVM N46819
Staphylococcus aureus W31862	1410700	PRJNA224330	224330	Terrabacteria group	Firmicutes	2.89879	32.8	-	JDHJ01	79	3035	2887	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383620	GCA_000559445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/445/GCA_000559445.1_Stap_aure_W31862_V1	-	W31862
Staphylococcus aureus F45300	1410703	PRJNA224333	224333	Terrabacteria group	Firmicutes	2.90357	32.7	-	JDHK01	32	3049	2916	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383623	GCA_000559465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/465/GCA_000559465.1_Stap_aure_F45300_V1	-	F45300
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91246	52	-	LHIA01	107	5001	4685	8/5/15	2/28/17	Contig	FDA	SAMN03894199	GCA_001242995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/995/GCA_001242995.1_Salmonella_enterica_CVM_N46820_v1.0	-	CVM N46820
Mycobacterium tuberculosis H2375	1448827	PRJNA235839	235839	Terrabacteria group	Actinobacteria	4.42353	65.6	-	JKIA01	69	4312	4096	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02599173	GCA_000706065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/065/GCA_000706065.1_Myco_tube_H2375_V1	-	H2375
Escherichia coli O157:H43	626531	PRJNA322305	322305	Proteobacteria	Gammaproteobacteria	4.9578	50.8	-	LYNF01	4	5172	4864	1/17/17	2/26/17	Scaffold	Seqomics Ltd	SAMN05150827	GCA_001953095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/095/GCA_001953095.1_ASM195309v1	-	T22
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10899	39.7	-	CRHO01	46	2336	2140	3/23/15	3/4/17	Contig	SC	SAMEA1025460	GCA_001196955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/955/GCA_001196955.1_6736_7_3	-	SMRU1275
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.49856	66.2	-	FRNG01	108	6139	5955	12/9/16	3/20/17	Contig	DTU	SAMEA2357439	GCA_900145835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/835/GCA_900145835.1_250	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.00596	39	-	NGFZ01	124	3966	3770	5/16/17	5/24/17	Contig	JCVI	SAMN06892289	GCA_002143105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/105/GCA_002143105.1_ASM214310v1	-	ARLG1853
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.77521	57	-	NLEF01	89	6004	5653	8/21/17	8/23/17	Contig	Zhejiang University	SAMN07251826	GCA_002262185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/185/GCA_002262185.1_ASM226218v1	-	L462
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.7792	57	-	NLEA01	91	6009	5661	8/22/17	8/23/17	Contig	Zhejiang University	SAMN07251821	GCA_002262215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/215/GCA_002262215.1_ASM226221v1	-	L400
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.07485	38.9	-	NGGD01	120	3957	3761	5/16/17	5/23/17	Contig	JCVI	SAMN06892284	GCA_002143145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/145/GCA_002143145.1_ASM214314v1	-	ARLG1858
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.77783	66.1	-	FRNI01	133	6479	6261	12/9/16	3/20/17	Contig	DTU	SAMEA2357440	GCA_900145845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/845/GCA_900145845.1_253	-	-
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.1376	39.6	-	CRLG01	73	2394	2143	3/23/15	3/15/17	Contig	SC	SAMEA1024787	GCA_001197295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/295/GCA_001197295.1_6755_1_1	-	SMRU769
Escherichia coli N37058PS	1416672	PRJNA221632	221632	Proteobacteria	Gammaproteobacteria	5.00337	50.7	-	AZCH01	82	5235	4849	1/24/17	6/24/17	Scaffold	FDA	SAMN02390171	GCA_001970035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/970/035/GCA_001970035.1_ASM197003v1	-	N37058PS
Mycobacterium tuberculosis M2193	1448773	PRJNA235785	235785	Terrabacteria group	Actinobacteria	4.41902	65.6	-	JKJY01	77	4342	4111	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02599119	GCA_000706085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/085/GCA_000706085.1_Myco_tube_M2193_V1	-	M2193
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.74597	52.2	-	LHIB01	62	4848	4606	8/5/15	2/28/17	Contig	FDA	SAMN03894200	GCA_001243065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/065/GCA_001243065.1_Salmonella_enterica_CVM_N46821_v1.0	-	CVM N46821
Staphylococcus aureus S30087	1410704	PRJNA224334	224334	Terrabacteria group	Firmicutes	2.82503	32.9	-	JDHL01	49	2949	2794	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383624	GCA_000559485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/485/GCA_000559485.1_Stap_aure_S30087_V1	-	S30087
Staphylococcus aureus H83536	1410705	PRJNA224335	224335	Terrabacteria group	Firmicutes	2.84152	32.9	-	JDHM01	57	2966	2816	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383625	GCA_000559505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/505/GCA_000559505.1_Stap_aure_H83536_V1	-	H83536
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.92854	51.9	-	LHIC01	107	5031	4777	8/5/15	2/28/17	Contig	FDA	SAMN03894202	GCA_001243085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/085/GCA_001243085.1_Salmonella_enterica_CVM_N46823_v1.0	-	CVM N46823
Mycobacterium tuberculosis M2084	1448749	PRJNA235761	235761	Terrabacteria group	Actinobacteria	4.39603	65.6	-	JKKW01	79	4322	4105	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02599095	GCA_000706105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/105/GCA_000706105.1_Myco_tube_M2084_V1	-	M2084
Escherichia coli N40513	1416675	PRJNA221632	221632	Proteobacteria	Gammaproteobacteria	5.12264	50.8	-	AZCF01	68	5383	5012	1/24/17	6/24/17	Scaffold	FDA	SAMN02390174	GCA_001970045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/970/045/GCA_001970045.1_ASM197004v1	-	N40513
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.27919	39.6	-	CQWZ01	145	2515	2286	3/23/15	3/4/17	Contig	SC	SAMEA1023816	GCA_001197315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/315/GCA_001197315.1_6714_8_12	-	SMRU564
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.83437	66.1	-	FRNJ01	118	6548	6348	12/9/16	3/20/17	Contig	DTU	SAMEA2357441	GCA_900145855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/855/GCA_900145855.1_254	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.72635	39	-	NGGP01	150	3703	3467	5/16/17	5/23/17	Contig	JCVI	SAMN06892241	GCA_002143185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/185/GCA_002143185.1_ASM214318v1	-	ARLG1794
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.80795	57	-	NLDY01	93	6041	5692	8/22/17	8/23/17	Contig	Zhejiang University	SAMN07251819	GCA_002262225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/225/GCA_002262225.1_ASM226222v1	-	L388
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.80805	57	-	NLDZ01	109	6047	5691	8/22/17	8/23/17	Contig	Zhejiang University	SAMN07251820	GCA_002262235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/235/GCA_002262235.1_ASM226223v1	-	L39
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.88464	38.9	-	NGGJ01	65	3782	3648	5/16/17	5/23/17	Contig	JCVI	SAMN06892249	GCA_002143195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/195/GCA_002143195.1_ASM214319v1	-	ARLG1786
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.77372	66.1	-	FRNK01	145	6483	6263	12/9/16	3/20/17	Contig	DTU	SAMEA2357442	GCA_900145865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/865/GCA_900145865.1_255	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08761	39.6	-	CRTD01	58	2299	2062	3/23/15	3/4/17	Contig	SC	SAMEA1025285	GCA_001197615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/615/GCA_001197615.1_6805_3_9	-	SMRU1449
Escherichia coli N36254PS	1416670	PRJNA221632	221632	Proteobacteria	Gammaproteobacteria	5.14171	50.7	-	AZCB01	137	5395	5036	1/24/17	6/24/17	Scaffold	FDA	SAMN02390169	GCA_001970075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/970/075/GCA_001970075.1_ASM197007v1	-	N36254PS
Mycobacterium tuberculosis M1759	1448714	PRJNA235725	235725	Terrabacteria group	Actinobacteria	4.43074	65.6	-	JKME01	80	4335	4119	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02599060	GCA_000706125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/125/GCA_000706125.1_Myco_tube_M1759_V1	-	M1759
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.08977	52.1	-	LHID01	89	5241	4982	8/5/15	2/28/17	Contig	FDA	SAMN03894203	GCA_001243095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/095/GCA_001243095.1_Salmonella_enterica_CVM_N46824_v1.0	-	CVM N46824
Staphylococcus aureus F84093	1410706	PRJNA224336	224336	Terrabacteria group	Firmicutes	2.82563	32.8	-	JDHN01	49	2980	2819	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383626	GCA_000559525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/525/GCA_000559525.1_Stap_aure_F84093_V1	-	F84093
Staphylococcus aureus F48584	1410708	PRJNA224338	224338	Terrabacteria group	Firmicutes	2.84916	32.8	-	JDHO01	59	2984	2831	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383628	GCA_000559545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/545/GCA_000559545.1_Stap_aure_F48584_V1	-	F48584
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.01516	52.1	-	LHIE01	85	5152	4907	8/5/15	2/28/17	Contig	FDA	SAMN03894204	GCA_001243105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/105/GCA_001243105.1_Salmonella_enterica_CVM_N46825_v1.0	-	CVM N46825
Mycobacterium tuberculosis M1307	1448655	PRJNA235666	235666	Terrabacteria group	Actinobacteria	4.42195	65.6	-	JKOL01	7	4283	4101	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02599001	GCA_000706145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/145/GCA_000706145.1_Myco_tube_M1307_V1	-	M1307
Escherichia coli N37122PS	1416673	PRJNA221632	221632	Proteobacteria	Gammaproteobacteria	5.19154	50.4	-	AZCD01	73	5382	5024	1/24/17	6/24/17	Scaffold	FDA	SAMN02390172	GCA_001970095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/970/095/GCA_001970095.1_ASM197009v1	-	N37122PS
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.1006	39.5	-	CRHA01	52	2319	2094	3/23/15	3/4/17	Contig	SC	SAMEA1025500	GCA_001197675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/675/GCA_001197675.1_6736_7_14	-	SMRU1286
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.83427	66.1	-	FRNL01	172	6586	6346	12/9/16	3/20/17	Contig	DTU	SAMEA2357443	GCA_900145875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/875/GCA_900145875.1_256	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.92015	39.1	-	NGGN01	91	3825	3685	5/16/17	5/23/17	Contig	JCVI	SAMN06892244	GCA_002143235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/235/GCA_002143235.1_ASM214323v1	-	ARLG1792
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.49541	57.4	-	NLEB01	73	5661	5365	8/22/17	8/23/17	Contig	Zhejiang University	SAMN07251822	GCA_002262275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/275/GCA_002262275.1_ASM226227v1	-	L440
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.62338	57.3	-	NLDV01	117	5811	5506	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07251816	GCA_002262295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/295/GCA_002262295.1_ASM226229v1	-	L38
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.07553	39	-	NGFW01	74	4016	3868	5/16/17	5/23/17	Contig	JCVI	SAMN06892293	GCA_002143265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/265/GCA_002143265.1_ASM214326v1	-	ARLG1847
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.72842	66.2	-	FRNM01	178	6456	6204	12/9/16	3/20/17	Contig	DTU	SAMEA2357444	GCA_900145885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/885/GCA_900145885.1_257	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.11984	39.7	-	CRUL01	44	2278	1975	3/22/15	3/15/17	Contig	SC	SAMEA1025321	GCA_001197695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/695/GCA_001197695.1_6805_5_6	-	SMRU1686
Escherichia coli N36410PS	1416671	PRJNA221632	221632	Proteobacteria	Gammaproteobacteria	5.19322	50.4	-	AZCC01	70	5379	5015	1/24/17	6/24/17	Scaffold	FDA	SAMN02390170	GCA_001970105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/970/105/GCA_001970105.1_ASM197010v1	-	N36410PS
Mycobacterium tuberculosis TB_RSA52	1421968	PRJNA228046	228046	Terrabacteria group	Actinobacteria	4.40408	65.6	-	JKVN01	19	4297	4113	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02403493	GCA_000706165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/165/GCA_000706165.1_Myco_tube_TB_RSA52_V1	-	TB_RSA52
Salmonella enterica subsp. enterica serovar Albany	211968	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.77394	52.1	-	LHIF01	43	4802	4573	8/5/15	2/28/17	Contig	FDA	SAMN03894206	GCA_001243145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/145/GCA_001243145.1_Salmonella_enterica_CVM_N46827-R_v1.0	-	CVM N46827
Staphylococcus aureus M92071	1410709	PRJNA224339	224339	Terrabacteria group	Firmicutes	2.82929	32.9	-	JDHP01	47	2981	2812	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383629	GCA_000559565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/565/GCA_000559565.1_Stap_aure_M92071_V1	-	M92071
Staphylococcus aureus M92086	1410710	PRJNA224340	224340	Terrabacteria group	Firmicutes	2.92013	32.8	-	JDHQ01	25	3070	2932	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383630	GCA_000559585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/585/GCA_000559585.1_Stap_aure_M92086_V1	-	M92086
Salmonella enterica subsp. enterica serovar Litchfield	486998	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.62861	52.2	-	LHIG01	47	4668	4455	8/5/15	2/28/17	Contig	FDA	SAMN03894208	GCA_001243175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/175/GCA_001243175.1_Salmonella_enterica_CVM_N46829_v1.0	-	CVM N46829
Mycobacterium tuberculosis MAL020205	1354113	PRJNA211720	211720	Terrabacteria group	Actinobacteria	4.43567	65.5	-	JKXY01	36	4298	4118	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02231187	GCA_000706185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/185/GCA_000706185.1_Myco_tube_MAL020205_V1	-	MAL020205
Escherichia coli	562	PRJNA311932	311932	Proteobacteria	Gammaproteobacteria	5.24955	50.5	-	LSRK01	165	5616	5221	2/8/17	2/26/17	Scaffold	National Institute of Health Dr Ricardo Jorge	SAMN04490314	GCA_001990545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/545/GCA_001990545.1_ASM199054v1	27679611	INSali25
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08836	39.5	-	CRWG01	74	2282	2058	3/22/15	3/11/17	Contig	SC	SAMEA1025510	GCA_001197875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/875/GCA_001197875.1_6807_1_18	-	SMRU1578
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.72314	66.2	-	FRNN01	254	6499	6198	12/9/16	3/20/17	Contig	DTU	SAMEA2357445	GCA_900145895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/895/GCA_900145895.1_258	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.91223	38.9	-	NGFQ01	109	3835	3636	5/16/17	5/24/17	Contig	JCVI	SAMN06892300	GCA_002143275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/275/GCA_002143275.1_ASM214327v1	-	ARLG1840
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.54155	57.3	-	NLDW01	84	5711	5420	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07251817	GCA_002262305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/305/GCA_002262305.1_ASM226230v1	-	L384
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.53594	57.3	-	NLDX01	78	5706	5413	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07251818	GCA_002262345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/345/GCA_002262345.1_ASM226234v1	-	L386
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.06343	38.9	-	NGGA01	82	3987	3845	5/16/17	5/24/17	Contig	JCVI	SAMN06892288	GCA_002143315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/315/GCA_002143315.1_ASM214331v1	-	ARLG1855
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.78049	66.1	-	FRNO01	183	6521	6276	12/9/16	3/20/17	Contig	DTU	SAMEA2357446	GCA_900145905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/905/GCA_900145905.1_259	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10998	39.6	-	CRKL01	54	2276	2074	3/23/15	3/11/17	Contig	SC	SAMEA1025511	GCA_001197975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/975/GCA_001197975.1_6753_3_8	-	SMRU1520
Escherichia coli	562	PRJNA245511	245511	Proteobacteria	Gammaproteobacteria	5.15104	50.7	-	JMIC01	29	5264	4889	3/10/17	4/18/17	Scaffold	BGI	SAMN02738943	GCA_002024905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/905/GCA_002024905.1_ASM202490v1	-	LCT-EC001
Mycobacterium tuberculosis MAL020102	1354156	PRJNA211673	211673	Terrabacteria group	Actinobacteria	4.41022	65.6	-	JKZP01	4	4303	4120	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02231140	GCA_000706205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/205/GCA_000706205.1_Myco_tube_MAL020102_V1	-	MAL020102
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.94169	51.9	-	LHIH01	73	5050	4800	8/5/15	2/28/17	Contig	FDA	SAMN03894209	GCA_001243195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/195/GCA_001243195.1_Salmonella_enterica_CVM_N46830_v1.0	-	CVM N46830
Staphylococcus aureus W35325	1410711	PRJNA224341	224341	Terrabacteria group	Firmicutes	2.79617	32.8	-	JDHR01	52	2943	2766	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383631	GCA_000559605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/605/GCA_000559605.1_Stap_aure_W35325_V1	-	W35325
Staphylococcus aureus T56203	1410712	PRJNA224342	224342	Terrabacteria group	Firmicutes	2.87414	32.7	-	JDHS01	25	3012	2878	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383632	GCA_000559625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/625/GCA_000559625.1_Stap_aure_T56203_V1	-	T56203
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.93752	51.9	-	LHII01	66	5046	4792	8/5/15	2/28/17	Contig	FDA	SAMN03894211	GCA_001243205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/205/GCA_001243205.1_Salmonella_enterica_CVM_N46832_v1.0	-	CVM N46832
Mycobacterium tuberculosis MAL010124	1354159	PRJNA211664	211664	Terrabacteria group	Actinobacteria	4.41206	65.6	-	JKZY01	9	4274	4114	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02231131	GCA_000706225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/225/GCA_000706225.1_Myco_tube_MAL010124_V1	-	MAL010124
Escherichia coli	562	PRJNA379934	379934	Proteobacteria	Gammaproteobacteria	4.60832	50.7	-	NARF01	80	4798	4471	4/12/17	4/16/17	Scaffold	Loyola University Chicago	SAMN06624120	GCA_002087945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/945/GCA_002087945.1_ASM208794v1	-	ATCC 29425
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.14692	39.7	-	CRIX01	63	2308	2021	3/23/15	3/11/17	Contig	SC	SAMEA1025240	GCA_001198295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/295/GCA_001198295.1_6753_1_24	-	SMRU1488
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.8293	66.1	-	FRNP01	141	6556	6338	12/9/16	3/20/17	Contig	DTU	SAMEA2357449	GCA_900145915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/915/GCA_900145915.1_260	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.02018	39	-	NGGE01	139	3986	3772	5/16/17	5/23/17	Contig	JCVI	SAMN06892283	GCA_002143335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/335/GCA_002143335.1_ASM214333v1	-	ARLG1859
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.80468	57	-	NLDQ01	103	6046	5687	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07251811	GCA_002262375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/375/GCA_002262375.1_ASM226237v1	-	L31
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.42362	57.3	-	NLDS01	69	5525	5256	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07251813	GCA_002262385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/385/GCA_002262385.1_ASM226238v1	-	L36
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.74003	38.9	-	NGGF01	40	3552	3417	5/16/17	5/23/17	Contig	JCVI	SAMN06892282	GCA_002143345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/345/GCA_002143345.1_ASM214334v1	-	ARLG1862
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.73672	66.2	-	FRNQ01	122	6419	6223	12/9/16	3/20/17	Contig	DTU	SAMEA2357450	GCA_900145925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/925/GCA_900145925.1_261	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.14831	39.6	-	CQUS01	49	2383	2150	3/22/15	3/11/17	Contig	SC	SAMEA1025574	GCA_001198455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/455/GCA_001198455.1_6710_6_2	-	SMRU1346
Escherichia coli	562	PRJNA307507	307507	Proteobacteria	Gammaproteobacteria	5.27791	50.6087	plasmid pG199_1:NZ_CM007889.1/CM007889.1	LSUP01	5	5538	5098	5/9/17	5/22/17	Scaffold	University of Minnesota	SAMN04381848	GCA_002120205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/205/GCA_002120205.1_ASM212020v1	27390780	G199
Mycobacterium tuberculosis MAL010117	1354157	PRJNA211659	211659	Terrabacteria group	Actinobacteria	4.41902	65.6	-	JLAD01	4	4286	4113	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02231126	GCA_000706245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/245/GCA_000706245.1_Myco_tube_MAL010117_V1	-	MAL010117
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.68673	52.1	-	LHIJ01	41	4740	4506	8/5/15	2/28/17	Contig	FDA	SAMN03894212	GCA_001243235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/235/GCA_001243235.1_Salmonella_enterica_CVM_N46833_v1.0	-	CVM N46833
Staphylococcus aureus W38597	1410713	PRJNA224343	224343	Terrabacteria group	Firmicutes	2.82958	32.7	-	JDHT01	19	2939	2811	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383633	GCA_000559645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/645/GCA_000559645.1_Stap_aure_W38597_V1	-	W38597
Staphylococcus aureus M13316	1410714	PRJNA224344	224344	Terrabacteria group	Firmicutes	2.92034	32.8	-	JDHU01	34	3079	2945	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383634	GCA_000559665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/665/GCA_000559665.1_Stap_aure_M13316_V1	-	M13316
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.93934	52.1	-	LHIK01	80	5039	4791	8/5/15	2/28/17	Contig	FDA	SAMN03894213	GCA_001243255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/255/GCA_001243255.1_Salmonella_enterica_CVM_N46834_v1.0	-	CVM N46834
Mycobacterium tuberculosis MD14825	1447518	PRJNA234645	234645	Terrabacteria group	Actinobacteria	4.43821	65.6	-	JLDO01	85	4349	4135	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02584669	GCA_000706265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/265/GCA_000706265.1_Myco_tube_MD14825_V1	-	MD14825
Escherichia coli	562	PRJNA330764	330764	Proteobacteria	Gammaproteobacteria	5.28595	50.5533	plasmid unnamed2:NZ_CM007909.1/CM007909.1; plasmid unnamed3:NZ_CM007910.1/CM007910.1; plasmid unnamed4:NZ_CM007911.1/CM007911.1; plasmid unnamed5:NZ_CM007912.1/CM007912.1; plasmid unnamed6:NZ_CM007913.1/CM007913.1; plasmid unnamed7:NZ_CM007914.1/CM007914.1	MCRE01	9	5575	5059	5/11/17	5/23/17	Scaffold	Peking University People’s Hospital	SAMN05425592	GCA_002133365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/365/GCA_002133365.1_ASM213336v1	-	CH613_eco
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10112	39.8	-	CRPI01	67	2246	2038	3/23/15	3/11/17	Contig	SC	SAMEA1024856	GCA_001198515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/515/GCA_001198515.1_6775_1_14	-	SMRU830
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.82709	66.1	-	FRNR01	156	6576	6338	12/9/16	3/20/17	Contig	DTU	SAMEA2357451	GCA_900145935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/935/GCA_900145935.1_262	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.06276	38.8	-	NGGK01	62	3986	3840	5/16/17	5/24/17	Contig	JCVI	SAMN06892248	GCA_002143375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/375/GCA_002143375.1_ASM214337v1	-	ARLG1787
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.42269	57.3	-	NLDT01	69	5527	5254	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07251814	GCA_002262415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/415/GCA_002262415.1_ASM226241v1	-	L37
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.79568	57	-	NLDR01	102	6034	5677	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07251812	GCA_002262425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/425/GCA_002262425.1_ASM226242v1	-	L350
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.16848	39	-	NGGO01	79	4106	3959	5/16/17	5/24/17	Contig	JCVI	SAMN06892242	GCA_002143395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/395/GCA_002143395.1_ASM214339v1	-	ARLG1793
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.82342	66.1	-	FRNS01	168	6570	6328	12/9/16	3/20/17	Contig	DTU	SAMEA2357452	GCA_900145945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/945/GCA_900145945.1_264	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.20263	39.4	-	CRKO01	84	2430	2182	3/23/15	3/11/17	Contig	SC	SAMEA1025408	GCA_001198595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/595/GCA_001198595.1_6753_4_16	-	SMRU1552
Escherichia coli	562	PRJNA327110	327110	Proteobacteria	Gammaproteobacteria	5.31653	50.3	-	MBOI01	133	5714	5284	5/16/17	5/30/17	Scaffold	Health Canada	SAMN05301323	GCA_002144055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/055/GCA_002144055.1_ASM214405v1	-	ATCC 35150_1
Mycobacterium tuberculosis MD14839	1447506	PRJNA234628	234628	Terrabacteria group	Actinobacteria	4.42417	65.6	-	JLEA01	106	4352	4137	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02584657	GCA_000706285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/285/GCA_000706285.1_Myco_tube_MD14839_V1	-	MD14839
Salmonella enterica subsp. enterica serovar Worthington	1160769	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.84679	52.2	-	LHIL01	68	4911	4656	8/5/15	2/28/17	Contig	FDA	SAMN03894214	GCA_001243275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/275/GCA_001243275.1_Salmonella_enterica_CVM_N46835_v1.0	-	CVM N46835
Staphylococcus aureus M13384	1410715	PRJNA224345	224345	Terrabacteria group	Firmicutes	2.90514	32.7	-	JDHV01	28	3080	2947	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383635	GCA_000559685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/685/GCA_000559685.1_Stap_aure_M13384_V1	-	M13384
Staphylococcus aureus M13403	1410716	PRJNA224346	224346	Terrabacteria group	Firmicutes	2.82004	32.7	-	JDHW01	31	2959	2822	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383636	GCA_000559705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/705/GCA_000559705.1_Stap_aure_M13403_V1	-	M13403
Salmonella enterica subsp. enterica serovar Litchfield	486998	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.62589	52.2	-	LHIM01	60	4660	4444	8/5/15	2/28/17	Contig	FDA	SAMN03894215	GCA_001243305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/305/GCA_001243305.1_Salmonella_enterica_CVM_N46836_v1.0	-	CVM N46836
Mycobacterium tuberculosis MD13744	1447505	PRJNA234626	234626	Terrabacteria group	Actinobacteria	4.42731	65.6	-	JLEB01	90	4349	4137	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02584656	GCA_000706305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/305/GCA_000706305.1_Myco_tube_MD13744_V1	-	MD13744
Escherichia coli	562	PRJNA327110	327110	Proteobacteria	Gammaproteobacteria	5.31478	50.3	-	MBOJ01	129	5709	5283	5/16/17	5/30/17	Scaffold	Health Canada	SAMN05301324	GCA_002144065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/065/GCA_002144065.1_ASM214406v1	-	ATCC 35150_100
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.21015	39.5	-	CRHB01	76	2485	2238	3/23/15	3/4/17	Contig	SC	SAMEA1025347	GCA_001198795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/795/GCA_001198795.1_6736_7_11	-	SMRU1283
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.82446	66.1	-	FRNT01	199	6594	6333	12/9/16	3/20/17	Contig	DTU	SAMEA2357453	GCA_900145955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/955/GCA_900145955.1_265	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.03083	39	-	NGGB01	143	4002	3766	5/16/17	5/23/17	Contig	JCVI	SAMN06892287	GCA_002143405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/405/GCA_002143405.1_ASM214340v1	-	ARLG1856
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.41951	57.3	-	NLDN01	66	5522	5247	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07251808	GCA_002262455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/455/GCA_002262455.1_ASM226245v1	-	L26
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.84022	56.9	-	NLDO01	131	6145	5767	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07251809	GCA_002262465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/465/GCA_002262465.1_ASM226246v1	-	L299
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.80876	38.9	-	NGGM01	55	3679	3549	5/16/17	5/24/17	Contig	JCVI	SAMN06892245	GCA_002143425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/425/GCA_002143425.1_ASM214342v1	-	ARLG1790
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.8155	66.1	-	FRNU01	178	6573	6335	12/9/16	3/20/17	Contig	DTU	SAMEA2357454	GCA_900145965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/965/GCA_900145965.1_266	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10073	39.5	-	CRUT01	53	2316	2098	3/23/15	3/4/17	Contig	SC	SAMEA1025516	GCA_001198915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/915/GCA_001198915.1_6805_6_18	-	SMRU1722
Escherichia coli	562	PRJNA327110	327110	Proteobacteria	Gammaproteobacteria	5.27088	50.3	-	MBOA01	124	5676	5250	5/16/17	5/30/17	Scaffold	Health Canada	SAMN05301326	GCA_002144095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/095/GCA_002144095.1_ASM214409v1	-	10-2735_100
Mycobacterium tuberculosis MD15774	1447503	PRJNA234623	234623	Terrabacteria group	Actinobacteria	4.42481	65.6	-	JLED01	92	4351	4140	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02584654	GCA_000706325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/325/GCA_000706325.1_Myco_tube_MD15774_V1	-	MD15774
Salmonella enterica subsp. enterica serovar Litchfield	486998	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.62411	52.2	-	LHIN01	109	4678	4443	8/5/15	2/28/17	Contig	FDA	SAMN03894216	GCA_001243325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/325/GCA_001243325.1_Salmonella_enterica_CVM_N46837_v1.0	-	CVM N46837
Staphylococcus aureus T59607	1410717	PRJNA224347	224347	Terrabacteria group	Firmicutes	2.78249	32.8	-	JDHX01	38	2919	2747	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383637	GCA_000559725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/725/GCA_000559725.1_Stap_aure_T59607_V1	-	T59607
Staphylococcus aureus W41914	1410719	PRJNA224349	224349	Terrabacteria group	Firmicutes	2.82408	32.8	-	JDHY01	65	2954	2798	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383639	GCA_000559745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/745/GCA_000559745.1_Stap_aure_W41914_V1	-	W41914
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.69555	52.1	-	LHIO01	80	4811	4551	8/5/15	2/28/17	Contig	FDA	SAMN03894217	GCA_001243345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/345/GCA_001243345.1_Salmonella_enterica_CVM_N46838_v1.0	-	CVM N46838
Mycobacterium tuberculosis MD15751	1447499	PRJNA234617	234617	Terrabacteria group	Actinobacteria	4.42715	65.6	-	JLEH01	73	4339	4134	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02584650	GCA_000706345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/345/GCA_000706345.1_Myco_tube_MD15751_V1	-	MD15751
Escherichia coli	562	PRJNA327110	327110	Proteobacteria	Gammaproteobacteria	5.281	50.3	-	MBNZ01	132	5696	5268	5/16/17	5/30/17	Scaffold	Health Canada	SAMN05301325	GCA_002144105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/105/GCA_002144105.1_ASM214410v1	-	10-2735_1
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09628	39.6	-	CRGS01	68	2310	2067	3/22/15	3/4/17	Contig	SC	SAMEA1025490	GCA_001198975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/975/GCA_001198975.1_6736_6_23	-	SMRU1271
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.72072	66.3	-	FROB01	181	6472	6249	12/9/16	3/20/17	Contig	DTU	SAMEA2357457	GCA_900145975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/975/GCA_900145975.1_269	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.92494	39	-	NGGR01	71	3781	3626	5/16/17	5/23/17	Contig	JCVI	SAMN06892239	GCA_002143475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/475/GCA_002143475.1_ASM214347v1	-	ARLG1800
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.81114	57	-	NLDM01	122	6063	5690	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07251807	GCA_002262475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/475/GCA_002262475.1_ASM226247v1	-	L256
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.81238	57	-	NLDP01	116	6055	5695	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07251810	GCA_002262485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/485/GCA_002262485.1_ASM226248v1	-	L30
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.16557	39	-	NGGS01	83	4105	3958	5/16/17	5/24/17	Contig	JCVI	SAMN06892237	GCA_002143495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/495/GCA_002143495.1_ASM214349v1	-	ARLG1802
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.71925	66.3	-	FROA01	256	6523	6239	12/9/16	3/20/17	Contig	DTU	SAMEA2357455	GCA_900145985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/985/GCA_900145985.1_267	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10272	39.5	-	CQVU01	46	2317	2099	3/23/15	3/4/17	Contig	SC	SAMEA1025613	GCA_001199255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/255/GCA_001199255.1_6710_8_22	-	SMRU1414
Escherichia coli	562	PRJNA327110	327110	Proteobacteria	Gammaproteobacteria	5.24418	50.6	-	MBOB01	116	5604	5194	5/16/17	5/30/17	Scaffold	Health Canada	SAMN05301327	GCA_002144135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/135/GCA_002144135.1_ASM214413v1	-	11-3088_1
Mycobacterium tuberculosis MD15958	1447488	PRJNA234601	234601	Terrabacteria group	Actinobacteria	4.41718	65.6	-	JLES01	104	4348	4136	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02584639	GCA_000706365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/365/GCA_000706365.1_Myco_tube_MD15958_V1	-	MD15958
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.74367	52.2	-	LHIP01	80	4807	4573	8/5/15	2/28/17	Contig	FDA	SAMN03894221	GCA_001243355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/355/GCA_001243355.1_Salmonella_enterica_CVM_N46842_v1.0	-	CVM N46842
Staphylococcus aureus W35356	1410720	PRJNA224350	224350	Terrabacteria group	Firmicutes	2.87358	32.7	-	JDHZ01	24	3011	2880	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383640	GCA_000559765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/765/GCA_000559765.1_Stap_aure_W35356_V1	-	W35356
Staphylococcus aureus W41918	1410721	PRJNA224351	224351	Terrabacteria group	Firmicutes	2.85118	32.8	-	JDIA01	87	2981	2832	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383641	GCA_000559785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/785/GCA_000559785.1_Stap_aure_W41918_V1	-	W41918
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.04265	52.1	-	LHIQ01	154	5182	4913	8/5/15	2/28/17	Contig	FDA	SAMN03894223	GCA_001243395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/395/GCA_001243395.1_Salmonella_enterica_CVM_N46844_v1.0	-	CVM N46844
Mycobacterium tuberculosis MD17901	1447482	PRJNA234595	234595	Terrabacteria group	Actinobacteria	4.38369	65.6	-	JLEY01	88	4329	4108	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02584633	GCA_000706385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/385/GCA_000706385.1_Myco_tube_MD17901_V1	-	MD17901
Escherichia coli	562	PRJNA327110	327110	Proteobacteria	Gammaproteobacteria	5.24626	50.6	-	MBOC01	116	5599	5200	5/16/17	5/30/17	Scaffold	Health Canada	SAMN05301328	GCA_002144145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/145/GCA_002144145.1_ASM214414v1	-	11-3088_100
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.18989	39.5	-	CRSY01	95	2400	2170	3/23/15	3/4/17	Contig	SC	SAMEA1025354	GCA_001199295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/295/GCA_001199295.1_6805_3_3	-	SMRU1443
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.61275	66.3	-	FRNY01	256	6423	6140	12/9/16	3/20/17	Contig	DTU	SAMEA2357456	GCA_900145995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/145/995/GCA_900145995.1_268	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.19031	39	-	NGGV01	89	4139	3980	5/16/17	5/24/17	Contig	JCVI	SAMN06892234	GCA_002143555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/555/GCA_002143555.1_ASM214355v1	-	ARLG1806
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.60084	57.2	-	NLDK01	88	5795	5488	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07251805	GCA_002262535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/535/GCA_002262535.1_ASM226253v1	-	L223
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.74672	57.1	-	NLDI01	127	5954	5622	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07251803	GCA_002262545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/545/GCA_002262545.1_ASM226254v1	-	L211
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.91051	38.9	-	NGGX01	80	3826	3686	5/16/17	5/24/17	Contig	JCVI	SAMN06892231	GCA_002143575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/575/GCA_002143575.1_ASM214357v1	-	ARLG1810
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.71591	66.3	-	FRNV01	152	6457	6251	12/9/16	3/20/17	Contig	DTU	SAMEA2357459	GCA_900146005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/005/GCA_900146005.1_270	-	-
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.98204	39.8	-	CRXX01	58	2196	1984	3/23/15	3/10/17	Contig	SC	SAMEA970283	GCA_001199355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/355/GCA_001199355.1_5242_6_7	-	BHN574
Escherichia coli	562	PRJNA327110	327110	Proteobacteria	Gammaproteobacteria	5.45289	50.3	-	MBOD01	215	6020	5514	5/16/17	5/30/17	Scaffold	Health Canada	SAMN05301357	GCA_002144165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/165/GCA_002144165.1_ASM214416v1	-	02-6737_1
Mycobacterium tuberculosis MD17646	1447473	PRJNA234586	234586	Terrabacteria group	Actinobacteria	4.42362	65.6	-	JLFG01	95	4347	4133	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02584624	GCA_000706405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/405/GCA_000706405.1_Myco_tube_MD17646_V1	-	MD17646
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.00239	52.1	-	LHIR01	110	5139	4893	8/5/15	2/28/17	Contig	FDA	SAMN03894224	GCA_001243425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/425/GCA_001243425.1_Salmonella_enterica_CVM_N46845-R_v1.0	-	CVM N46845
Staphylococcus aureus H19520	1410723	PRJNA224353	224353	Terrabacteria group	Firmicutes	2.88559	32.8	-	JDIB01	35	3023	2899	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383643	GCA_000559805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/805/GCA_000559805.1_Stap_aure_H19520_V1	-	H19520
Staphylococcus aureus M41648	1410724	PRJNA224354	224354	Terrabacteria group	Firmicutes	2.83831	32.8	-	JDIC01	62	2954	2814	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383644	GCA_000559825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/825/GCA_000559825.1_Stap_aure_M41648_V1	-	M41648
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.85322	52.1	-	LHIS01	77	4973	4727	8/5/15	2/28/17	Contig	FDA	SAMN03894225	GCA_001243445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/445/GCA_001243445.1_Salmonella_enterica_CVM_N46846-R_v1.0	-	CVM N46846
Mycobacterium tuberculosis MD17890	1447450	PRJNA234563	234563	Terrabacteria group	Actinobacteria	4.37286	65.6	-	JLGD01	95	4319	4094	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02584601	GCA_000706425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/425/GCA_000706425.1_Myco_tube_MD17890_V1	-	MD17890
Escherichia coli	562	PRJNA327110	327110	Proteobacteria	Gammaproteobacteria	5.47371	50.3	-	MBOE01	220	6048	5547	5/16/17	5/30/17	Scaffold	Health Canada	SAMN05301359	GCA_002144185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/185/GCA_002144185.1_ASM214418v1	-	02-6737_100
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.19322	39.4	-	CRQG01	60	2387	2169	3/23/15	3/11/17	Contig	SC	SAMEA1025051	GCA_001199535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/535/GCA_001199535.1_6775_2_22	-	SMRU862
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.71911	66.3	-	FRNW01	148	6458	6250	12/9/16	3/20/17	Contig	DTU	SAMEA2357460	GCA_900146015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/015/GCA_900146015.1_271	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.9244	39	-	NGGY01	82	3763	3609	5/16/17	5/24/17	Contig	JCVI	SAMN06892227	GCA_002143605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/605/GCA_002143605.1_ASM214360v1	-	ARLG1814
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.72755	57.1	-	NLDJ01	104	5948	5612	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07251804	GCA_002262555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/555/GCA_002262555.1_ASM226255v1	-	L222
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.41967	57.3	-	NLDL01	60	5516	5249	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07251806	GCA_002262565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/565/GCA_002262565.1_ASM226256v1	-	L23
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.96934	39.1	-	NGGZ01	176	3906	3693	5/16/17	5/24/17	Contig	JCVI	SAMN06892226	GCA_002143625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/625/GCA_002143625.1_ASM214362v1	-	ARLG1816
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.61871	66.3	-	FRNX01	160	6371	6162	12/9/16	3/20/17	Contig	DTU	SAMEA2357462	GCA_900146025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/025/GCA_900146025.1_273	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.06749	39.7	-	CRTZ01	67	2261	2053	3/23/15	3/10/17	Contig	SC	SAMEA1025597	GCA_001199555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/555/GCA_001199555.1_6805_5_16	-	SMRU1696
Escherichia coli	562	PRJNA377406	377406	Proteobacteria	Gammaproteobacteria	5.18334	50.6	-	MWUH01	313	5552	4931	6/9/17	6/12/17	Scaffold	Colistin resistant bacteria: the last resort antimicrobial which use in farm animals is a new challenge for food safety (RESCOL)	SAMN06461350	GCA_002188315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/315/GCA_002188315.1_ASM218831v1	-	HSP38
Mycobacterium tuberculosis XTB13-201	1427279	PRJNA229676	229676	Terrabacteria group	Actinobacteria	4.39205	65.5	-	JLIS01	4	4265	4100	6/12/14	3/9/17	Scaffold	Broad Institute	SAMN02419635	GCA_000706445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/445/GCA_000706445.1_Myco_tube_XTB13-201_V1	-	XTB13-201
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.85329	52.1	-	LHIT01	68	4970	4725	8/5/15	2/28/17	Contig	FDA	SAMN03894226	GCA_001243455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/455/GCA_001243455.1_Salmonella_enterica_CVM_N46847-R_v1.0	-	CVM N46847
Staphylococcus aureus F54452	1410725	PRJNA224355	224355	Terrabacteria group	Firmicutes	2.85146	32.8	-	JDID01	66	2982	2836	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383645	GCA_000559845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/845/GCA_000559845.1_Stap_aure_F54452_V1	-	F54452
Staphylococcus aureus F54461	1410726	PRJNA224356	224356	Terrabacteria group	Firmicutes	2.88702	32.7	-	JDIE01	24	3021	2890	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383646	GCA_000559865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/865/GCA_000559865.1_Stap_aure_F54461_V1	-	F54461
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.01953	51.8	-	LHIU01	133	5083	4752	8/5/15	2/28/17	Contig	FDA	SAMN03894228	GCA_001243485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/485/GCA_001243485.1_Salmonella_enterica_CVM_N46849-R_v1.0	-	CVM N46849
Mycobacterium tuberculosis UT0118	1408972	PRJNA223604	223604	Terrabacteria group	Actinobacteria	4.40584	65.6	-	JLNX01	69	4317	4097	6/12/14	3/9/17	Scaffold	Broad Institute	SAMN02381049	GCA_000706465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/465/GCA_000706465.1_Myco_tube_UT0118_V1	-	UT0118
Escherichia coli N40607	1416676	PRJNA221632	221632	Proteobacteria	Gammaproteobacteria	5.19427	50.602	plasmid pTC_N40607:NZ_CP007651.1/CP007651.1	AZCG01	113	5491	5070	1/24/17	8/21/17	Scaffold	FDA	SAMN02390175	GCA_002196035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/035/GCA_002196035.1_ASM219603v1	-	N40607
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.19735	39.6	-	CRGI01	62	2420	2204	3/23/15	3/11/17	Contig	SC	SAMEA1025342	GCA_001199595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/595/GCA_001199595.1_6736_5_8	-	SMRU1232
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.71447	66.3	-	FRNZ01	201	6490	6239	12/9/16	3/20/17	Contig	DTU	SAMEA2357461	GCA_900146035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/035/GCA_900146035.1_272	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.02181	39	-	NGHA01	83	3953	3813	5/16/17	5/24/17	Contig	JCVI	SAMN06892225	GCA_002143655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/655/GCA_002143655.1_ASM214365v1	-	ARLG1819
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.77121	57.1	-	NLDE01	117	5995	5658	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07251799	GCA_002262615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/615/GCA_002262615.1_ASM226261v1	-	L182
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.82712	57	-	NLDG01	268	6016	5670	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07251801	GCA_002262625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/625/GCA_002262625.1_ASM226262v1	-	L20
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.03906	39	-	NGHB01	139	4010	3798	5/16/17	5/24/17	Contig	JCVI	SAMN06892224	GCA_002143675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/675/GCA_002143675.1_ASM214367v1	-	ARLG1821
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.61193	66.3	-	FROC01	158	6370	6157	12/9/16	3/20/17	Contig	DTU	SAMEA2357463	GCA_900146045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/045/GCA_900146045.1_274	-	-
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14407	39.7	-	CRRF01	65	2303	2018	3/23/15	3/11/17	Contig	SC	SAMEA1025081	GCA_001199635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/635/GCA_001199635.1_6805_1_12	-	SMRU1020
Escherichia coli	562	PRJNA380692	380692	Proteobacteria	Gammaproteobacteria	4.91832	50.5	-	NGBR01	48	5107	4730	6/16/17	6/21/17	Scaffold	Fujian Academy of Agriculture Sciences	SAMN06646344	GCA_002196825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/825/GCA_002196825.1_ASM219682v1	28000056	c20
Mycobacterium tuberculosis KT-0107	1400938	PRJNA219821	219821	Terrabacteria group	Actinobacteria	4.39655	65.5	-	JLQM01	9	4274	4077	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02360616	GCA_000706485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/485/GCA_000706485.1_Myco_tube_KT-0107_V1	-	KT-0107
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.94823	52.1	-	LHIW01	168	5075	4803	8/5/15	2/28/17	Contig	FDA	SAMN03894230	GCA_001243505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/505/GCA_001243505.1_Salmonella_enterica_CVM_N46851-R_v1.0	-	CVM N46851
Staphylococcus aureus F54467	1410727	PRJNA224357	224357	Terrabacteria group	Firmicutes	2.85322	32.8	-	JDIF01	65	2963	2812	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383647	GCA_000559885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/885/GCA_000559885.1_Stap_aure_F54467_V1	-	F54467
Staphylococcus aureus F54471	1410728	PRJNA224358	224358	Terrabacteria group	Firmicutes	2.90014	32.7	-	JDIG01	82	3040	2873	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383648	GCA_000559905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/905/GCA_000559905.1_Stap_aure_F54471_V1	-	F54471
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.59002	52.1	-	LHIV01	71	4643	4427	8/5/15	2/28/17	Contig	FDA	SAMN03894229	GCA_001243515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/515/GCA_001243515.1_Salmonella_enterica_CVM_N46850-R_v1.0	-	CVM N46850
Mycobacterium tuberculosis KT-0079	1400922	PRJNA219805	219805	Terrabacteria group	Actinobacteria	4.42406	65.6	-	JLRC01	3	4307	4105	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02360600	GCA_000706505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/505/GCA_000706505.1_Myco_tube_KT-0079_V1	-	KT-0079
Escherichia coli	562	PRJNA386458	386458	Proteobacteria	Gammaproteobacteria	5.42025	50.4	-	NIPT01	594	5921	5411	6/30/17	7/3/17	Scaffold	Anses	SAMN06947876	GCA_002213265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/213/265/GCA_002213265.1_ASM221326v1	-	30934
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12793	39.8	-	CRGD01	46	2353	2135	3/23/15	3/11/17	Contig	SC	SAMEA1025200	GCA_001199975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/975/GCA_001199975.1_6736_5_20	-	SMRU1244
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.61189	66.3	-	FROD01	181	6369	6157	12/9/16	3/21/17	Contig	DTU	SAMEA2357464	GCA_900146055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/055/GCA_900146055.1_275	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.04552	38.9	-	NGHC01	74	3968	3829	5/16/17	5/24/17	Contig	JCVI	SAMN06892223	GCA_002143685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/685/GCA_002143685.1_ASM214368v1	-	ARLG1824
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.42195	57.3	-	NLDF01	63	5525	5257	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07251800	GCA_002262635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/635/GCA_002262635.1_ASM226263v1	-	L196
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.84186	56.9	-	NLDH01	133	6141	5767	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07251802	GCA_002262675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/675/GCA_002262675.1_ASM226267v1	-	L201
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.98728	38.9	-	NGHD01	85	3913	3771	5/16/17	5/24/17	Contig	JCVI	SAMN06892222	GCA_002143715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/715/GCA_002143715.1_ASM214371v1	-	ARLG1827
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.90216	66	-	FROE01	146	6708	6469	12/9/16	3/21/17	Contig	DTU	SAMEA2357465	GCA_900146065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/065/GCA_900146065.1_276	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09032	39.7	-	CROW01	61	2308	2093	3/23/15	3/11/17	Contig	SC	SAMEA1025384	GCA_001200115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/115/GCA_001200115.1_6755_6_19	-	SMRU1196
Escherichia coli	562	PRJNA368625	368625	Proteobacteria	Gammaproteobacteria	4.89975	50.7	-	MUGF01	139	5127	4803	7/24/17	7/28/17	Scaffold	Universidade de Aveiro	SAMN06266496	GCA_002224025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/025/GCA_002224025.1_ASM222402v1	28726622	ST744_Ec36
Mycobacterium tuberculosis KT-0023	1400885	PRJNA219768	219768	Terrabacteria group	Actinobacteria	4.41465	65.5	-	JLSB01	5	4274	4091	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN02360563	GCA_000706525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/525/GCA_000706525.1_Myco_tube_KT-0023_V1	-	KT-0023
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.14525	52.1	-	LHIX01	109	5339	5062	8/5/15	2/28/17	Contig	FDA	SAMN03894231	GCA_001243555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/555/GCA_001243555.1_Salmonella_enterica_CVM_N46852_v1.0	-	CVM N46852
Staphylococcus aureus F54494	1410729	PRJNA224359	224359	Terrabacteria group	Firmicutes	2.8345	32.8	-	JDIH01	72	2976	2819	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383649	GCA_000559925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/925/GCA_000559925.1_Stap_aure_F54494_V1	-	F54494
Staphylococcus aureus H12818	1410731	PRJNA224361	224361	Terrabacteria group	Firmicutes	2.73094	32.7	-	JDII01	43	2828	2693	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383651	GCA_000559945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/945/GCA_000559945.1_Stap_aure_H12818_V1	-	H12818
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.87458	52.1	-	LHIY01	73	5010	4766	8/5/15	2/28/17	Contig	FDA	SAMN03894232	GCA_001243585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/585/GCA_001243585.1_Salmonella_enterica_CVM_N46853_v1.0	-	CVM N46853
Mycobacterium tuberculosis TKK-01-0020	1267357	PRJNA183516	183516	Terrabacteria group	Actinobacteria	4.41162	65.5	-	JLZB01	9	4298	4118	6/12/14	3/8/17	Scaffold	Broad Institute	SAMN01828244	GCA_000706545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/545/GCA_000706545.1_Myco_tube_TKK-01-0020_V3	-	TKK-01-0020
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.07431	50.5	-	LELZ01	18	5187	4850	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262726	GCA_002243735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/735/GCA_002243735.1_ASM224373v1	-	35-560
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.06866	39.6	-	CRNC01	72	2275	2037	3/23/15	3/11/17	Contig	SC	SAMEA1024657	GCA_001200195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/195/GCA_001200195.1_6755_3_5	-	SMRU869
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.90733	66	-	FROF01	162	6721	6465	12/9/16	3/21/17	Contig	DTU	SAMEA2357466	GCA_900146075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/075/GCA_900146075.1_277	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.72635	38.9	-	NGHE01	43	3548	3411	5/16/17	5/24/17	Contig	JCVI	SAMN06892221	GCA_002143725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/725/GCA_002143725.1_ASM214372v1	-	ARLG1830
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.60333	57.2	-	NLDA01	89	5795	5499	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07251795	GCA_002262705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/705/GCA_002262705.1_ASM226270v1	-	L136
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.42166	57.3	-	NLDC01	65	5524	5253	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07251797	GCA_002262735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/735/GCA_002262735.1_ASM226273v1	-	L176
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.99913	38.9	-	NGHF01	62	3908	3764	5/16/17	5/24/17	Contig	JCVI	SAMN06892220	GCA_002143755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/755/GCA_002143755.1_ASM214375v1	-	ARLG1833
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.77727	66	-	FROG01	99	6559	6356	12/9/16	3/21/17	Contig	DTU	SAMEA2357467	GCA_900146085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/085/GCA_900146085.1_278	-	-
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.16646	39.6	-	CQXL01	67	2418	2184	3/23/15	3/11/17	Contig	SC	SAMEA1024689	GCA_001200215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/215/GCA_001200215.1_6730_1_7	-	SMRU583
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.75657	50.6	-	LELY01	6	4844	4570	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262725	GCA_002243745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/745/GCA_002243745.1_ASM224374v1	-	35-490
Mycobacterium tuberculosis KT-0045	1400897	PRJNA219780	219780	Terrabacteria group	Actinobacteria	4.42241	65.5	-	JLRS01	5	4281	4089	6/13/14	3/8/17	Scaffold	Broad Institute	SAMN02360575	GCA_000706785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/785/GCA_000706785.1_Myco_tube_KT-0045_V1	-	KT-0045
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.70588	52.2	-	LHIZ01	92	4776	4540	8/5/15	2/28/17	Contig	FDA	SAMN03894233	GCA_001243605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/605/GCA_001243605.1_Salmonella_enterica_CVM_N46854_v1.0	-	CVM N46854
Staphylococcus aureus M52055	1410732	PRJNA224362	224362	Terrabacteria group	Firmicutes	2.87626	32.8	-	JDIJ01	2	3024	2867	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383652	GCA_000559965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/965/GCA_000559965.1_Stap_aure_M52055_V1	-	M52055
Staphylococcus aureus W85047	1410733	PRJNA224363	224363	Terrabacteria group	Firmicutes	2.88621	32.7	-	JDIK01	26	3017	2894	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383653	GCA_000559985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/559/985/GCA_000559985.1_Stap_aure_W85047_V1	-	W85047
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.82182	52.1	-	LHJA01	66	4966	4714	8/5/15	2/28/17	Contig	FDA	SAMN03894234	GCA_001243615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/615/GCA_001243615.1_Salmonella_enterica_CVM_N46855_v1.0	-	CVM N46855
Mycobacterium tuberculosis Mtb194	1354276	PRJNA210727	210727	Terrabacteria group	Actinobacteria	4.20212	65.1	-	AUNH01	412	4441	3956	6/17/14	3/8/17	Scaffold	Institute of Microbiology Chinese Academy of Sciences	SAMN02864882	GCA_000709575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/575/GCA_000709575.1_Mtb194v1	24923884	Mtb194
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.84562	50.8	-	LEMB01	9	4937	4656	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262728	GCA_002243755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/755/GCA_002243755.1_ASM224375v1	-	53-632
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12796	39.5	-	CRRC01	53	2347	2125	3/23/15	3/10/17	Contig	SC	SAMEA1025038	GCA_001200235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/235/GCA_001200235.1_6791_6_9	-	SMRU633
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.90484	66	-	FROH01	148	6709	6477	12/9/16	5/22/17	Contig	DTU	SAMEA2357468	GCA_900146095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/095/GCA_900146095.1_279	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.08905	38.9	-	NGHI01	83	4021	3864	5/16/17	5/24/17	Contig	JCVI	SAMN06892217	GCA_002143775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/775/GCA_002143775.1_ASM214377v1	-	ARLG1838
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.54834	57.3	-	NLDB01	94	5727	5435	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07251796	GCA_002262745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/745/GCA_002262745.1_ASM226274v1	-	L142
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.76788	57.1	-	NLCZ01	278	5939	5621	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07251794	GCA_002262775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/775/GCA_002262775.1_ASM226277v1	-	L124
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.047	39	-	NGHG01	146	4015	3806	5/16/17	5/24/17	Contig	JCVI	SAMN06892219	GCA_002143785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/785/GCA_002143785.1_ASM214378v1	-	ARLG1835
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.91542	66	-	FROJ01	132	6691	6475	12/9/16	3/21/17	Contig	DTU	SAMEA2357470	GCA_900146105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/105/GCA_900146105.1_280	-	-
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10919	39.5	-	CRLZ01	83	2315	2110	3/22/15	3/4/17	Contig	SC	SAMEA1025068	GCA_001200295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/295/GCA_001200295.1_6755_2_16	-	SMRU808
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.11484	50.6	-	LEMA01	7	5209	4889	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262727	GCA_002243765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/765/GCA_002243765.1_ASM224376v1	-	35-593
Mycobacterium tuberculosis Mtb43	1353527	PRJNA210122	210122	Terrabacteria group	Actinobacteria	4.42107	64.6	-	AUPO01	580	4476	4071	6/17/14	3/8/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN02864886	GCA_000709595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/595/GCA_000709595.1_Mtb43v1	24923884	Mtb43
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91158	52	-	LHJC01	87	4988	4690	8/5/15	2/28/17	Contig	FDA	SAMN03894236	GCA_001243655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/655/GCA_001243655.1_Salmonella_enterica_CVM_N46857_v1.0	-	CVM N46857
Staphylococcus aureus H60145	1410734	PRJNA224364	224364	Terrabacteria group	Firmicutes	2.87366	32.8	-	JDIL01	2	3021	2871	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383654	GCA_000560005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/005/GCA_000560005.1_Stap_aure_H60145_V1	-	H60145
Staphylococcus aureus F16077	1410735	PRJNA224365	224365	Terrabacteria group	Firmicutes	2.76212	32.8	-	JDIM01	51	2884	2726	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383655	GCA_000560025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/025/GCA_000560025.1_Stap_aure_F16077_V1	-	F16077
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.88059	52.1	-	LHJF01	111	5027	4767	8/5/15	2/28/17	Contig	FDA	SAMN03894239	GCA_001243695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/695/GCA_001243695.1_Salmonella_enterica_CVM_N46860_v1.0	-	CVM N46860
Mycobacterium tuberculosis Mtb293	1355018	PRJNA210813	210813	Terrabacteria group	Actinobacteria	4.20088	65.2	-	AUPX01	358	4400	3995	6/17/14	3/8/17	Scaffold	Institute of Microbiology Chinese Academy of Sciences	SAMN02864883	GCA_000709615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/615/GCA_000709615.1_Mtb293v1	24923884	Mtb293
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.83577	50.8	-	LEMC01	11	4941	4577	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262729	GCA_002243815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/815/GCA_002243815.1_ASM224381v1	-	53-844
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07811	39.7	-	CRQF01	74	2311	2096	3/22/15	3/4/17	Contig	SC	SAMEA1025040	GCA_001200355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/355/GCA_001200355.1_6775_2_23	-	SMRU863
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.9109	66	-	FROI01	100	6678	6479	12/9/16	3/21/17	Contig	DTU	SAMEA2357471	GCA_900146115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/115/GCA_900146115.1_281	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.12233	38.9	-	NGHH01	78	4067	3914	5/16/17	5/24/17	Contig	JCVI	SAMN06892218	GCA_002143795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/795/GCA_002143795.1_ASM214379v1	-	ARLG1836
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.60721	57.2	-	NLCY01	92	5795	5497	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07251793	GCA_002262795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/795/GCA_002262795.1_ASM226279v1	-	L123
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.74488	57.1	-	NLCX01	278	5921	5601	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07251792	GCA_002262805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/805/GCA_002262805.1_ASM226280v1	-	L122
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.93259	39	-	NGHK01	94	3880	3738	5/16/17	5/24/17	Contig	JCVI	SAMN06892216	GCA_002143835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/835/GCA_002143835.1_ASM214383v1	-	ARLG1275
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.91125	66	-	FROK01	136	6705	6475	12/9/16	3/21/17	Contig	DTU	SAMEA2357472	GCA_900146125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/125/GCA_900146125.1_282	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12673	39.5	-	CRSD01	60	2374	2135	3/22/15	3/4/17	Contig	SC	SAMEA1025491	GCA_001200415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/415/GCA_001200415.1_6805_2_21	-	SMRU1437
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.7225	50.7	-	LEME01	4	4800	4546	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262731	GCA_002243825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/825/GCA_002243825.1_ASM224382v1	-	53-1034
Mycobacterium tuberculosis Mtb526	1355019	PRJNA210816	210816	Terrabacteria group	Actinobacteria	4.20486	65.1	-	AUTF01	373	4389	3995	6/17/14	3/8/17	Scaffold	Institute of Microbiology Chinese Academy of Sciences	SAMN02864885	GCA_000709635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/635/GCA_000709635.1_Mtb526v1	24923884	Mtb526
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.76889	52.2	-	LHJE01	81	4861	4619	8/5/15	2/28/17	Contig	FDA	SAMN03894238	GCA_001243705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/705/GCA_001243705.1_Salmonella_enterica_CVM_N46859_v1.0	-	CVM N46859
Staphylococcus aureus F25913	1410736	PRJNA224366	224366	Terrabacteria group	Firmicutes	2.83117	32.8	-	JDIN01	64	2992	2806	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383656	GCA_000560045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/045/GCA_000560045.1_Stap_aure_F25913_V1	-	F25913
Staphylococcus aureus T62328	1410737	PRJNA224367	224367	Terrabacteria group	Firmicutes	2.84082	32.8	-	JDIO01	35	3004	2829	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383657	GCA_000560065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/065/GCA_000560065.1_Stap_aure_T62328_V1	-	T62328
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.95177	52.1	-	LHJG01	81	5115	4822	8/5/15	2/28/17	Contig	FDA	SAMN03894241	GCA_001243745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/745/GCA_001243745.1_Salmonella_enterica_CVM_N47711_v1.0	-	CVM N47711
Mycobacterium tuberculosis Mtb562	1355020	PRJNA210815	210815	Terrabacteria group	Actinobacteria	4.1881	65.2	-	AUTG01	474	4461	3914	6/17/14	3/8/17	Scaffold	Institute of Microbiology Chinese Academy of Sciences	SAMN02864881	GCA_000709655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/655/GCA_000709655.1_Mtb562v1	24923884	Mtb562
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.04249	50.8	-	LEMF01	15	5268	4804	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262732	GCA_002243835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/835/GCA_002243835.1_ASM224383v1	-	67-921
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08657	39.6	-	CRRV01	50	2310	2094	3/23/15	3/4/17	Contig	SC	SAMEA1025572	GCA_001200535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/535/GCA_001200535.1_6805_2_11	-	SMRU1427
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.90982	66	-	FROL01	117	6687	6480	12/9/16	3/21/17	Contig	DTU	SAMEA2357473	GCA_900146135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/135/GCA_900146135.1_283	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.91188	39	-	NGHP01	97	3844	3668	5/16/17	5/24/17	Contig	JCVI	SAMN06892211	GCA_002143855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/855/GCA_002143855.1_ASM214385v1	-	ARLG1323
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.61918	57.2	-	NLCW01	185	5799	5492	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07251791	GCA_002262855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/855/GCA_002262855.1_ASM226285v1	-	L117
Klebsiella pneumoniae	573	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.67583	57.1	-	NPGM01	79	5676	5372	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07345013	GCA_002264195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/195/GCA_002264195.1_ASM226419v1	-	K950
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.94722	39	-	NGHM01	76	3831	3670	5/16/17	5/24/17	Contig	JCVI	SAMN06892214	GCA_002143875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/875/GCA_002143875.1_ASM214387v1	-	ARLG1306
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.90419	66	-	FRON01	140	6706	6476	12/9/16	3/21/17	Contig	DTU	SAMEA2357474	GCA_900146145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/145/GCA_900146145.1_284	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.03034	39.7	-	CRTP01	94	2216	2021	3/23/15	3/4/17	Contig	SC	SAMEA1025189	GCA_001200775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/775/GCA_001200775.1_6805_4_7	-	SMRU1663
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.82525	50.8	-	LEMD01	7	4920	4572	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262730	GCA_002243845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/845/GCA_002243845.1_ASM224384v1	-	53-936
Mycobacterium tuberculosis Mtb940	1365190	PRJNA212149	212149	Terrabacteria group	Actinobacteria	4.19256	65.2	-	AUTX01	434	4463	3965	6/17/14	3/8/17	Scaffold	Institute of Microbiology Chinese Academy of Sciences	SAMN02864847	GCA_000709675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/675/GCA_000709675.1_Mtb940v1	24923884	Mtb940
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.86108	52.1	-	LHJH01	87	4989	4748	8/5/15	2/28/17	Contig	FDA	SAMN03894243	GCA_001243775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/775/GCA_001243775.1_Salmonella_enterica_CVM_N47713_v1.0	-	CVM N47713
Staphylococcus aureus M20676	1410738	PRJNA224368	224368	Terrabacteria group	Firmicutes	2.83911	32.8	-	JDIP01	29	2995	2833	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383658	GCA_000560085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/085/GCA_000560085.1_Stap_aure_M20676_V1	-	M20676
Staphylococcus aureus T66282	1410740	PRJNA224370	224370	Terrabacteria group	Firmicutes	2.87024	32.7	-	JDIQ01	21	3009	2882	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383660	GCA_000560105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/105/GCA_000560105.1_Stap_aure_T66282_V1	-	T66282
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.68065	52.3	-	LHJI01	79	4749	4515	8/5/15	2/28/17	Contig	FDA	SAMN03894244	GCA_001243785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/785/GCA_001243785.1_Salmonella_enterica_CVM_N47714_v1.0	-	CVM N47714
Mycobacterium tuberculosis Mtb984	1365185	PRJNA212150	212150	Terrabacteria group	Actinobacteria	4.16948	65.2	-	AUTY01	491	4477	3933	6/17/14	3/8/17	Scaffold	Institute of Microbiology Chinese Academy of Sciences	SAMN02864884	GCA_000709695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/695/GCA_000709695.1_Mtb984v1	24923884	Mtb984
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.05629	50.8	-	LEMH01	18	5265	4789	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262734	GCA_002243895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/895/GCA_002243895.1_ASM224389v1	-	67-966
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.19445	39.8	-	CRSI01	89	2485	2232	3/23/15	3/10/17	Contig	SC	SAMEA1025229	GCA_001200795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/795/GCA_001200795.1_6805_2_3	-	SMRU1419
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.7891	66	-	FROM01	141	6597	6368	12/9/16	3/21/17	Contig	DTU	SAMEA2357475	GCA_900146155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/155/GCA_900146155.1_285	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.05801	38.8	-	NGHQ01	48	3914	3750	5/16/17	5/24/17	Contig	JCVI	SAMN06892210	GCA_002143885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/885/GCA_002143885.1_ASM214388v1	-	ARLG1326
Klebsiella pneumoniae	573	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.52446	57.4	-	NPGO01	84	5695	5415	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07345011	GCA_002264245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/245/GCA_002264245.1_ASM226424v1	-	K4314
Klebsiella pneumoniae	573	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.53071	57.4	-	NPGN01	93	5705	5419	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07345012	GCA_002264265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/265/GCA_002264265.1_ASM226426v1	-	K4324
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.95378	39.1	-	NGHL01	83	3854	3720	5/16/17	5/24/17	Contig	JCVI	SAMN06892215	GCA_002143935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/935/GCA_002143935.1_ASM214393v1	-	ARLG1294
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.91481	66	-	FROP01	126	6690	6467	12/9/16	3/21/17	Contig	DTU	SAMEA2357476	GCA_900146165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/165/GCA_900146165.1_286	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08792	39.5	-	CROC01	69	2316	2095	3/23/15	3/11/17	Contig	SC	SAMEA1025223	GCA_001200835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/835/GCA_001200835.1_6755_5_15	-	SMRU1167
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.71845	50.8	-	LEMG01	5	4835	4516	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262733	GCA_002243905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/905/GCA_002243905.1_ASM224390v1	-	67-965
Mycobacterium tuberculosis	1773	PRJNA248335	248335	Terrabacteria group	Actinobacteria	4.4871	65.6	-	JNNW01	166	4367	4155	8/4/14	3/10/17	Scaffold	National Health Research Institutes	SAMN02797826	GCA_000737385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/737/385/GCA_000737385.1_ASM73738v1	25189576	A4
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.88356	52.1	-	LHJJ01	84	5001	4758	8/5/15	2/28/17	Contig	FDA	SAMN03894245	GCA_001243815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/815/GCA_001243815.1_Salmonella_enterica_CVM_N47715_v1.0	-	CVM N47715
Staphylococcus aureus T66286	1410741	PRJNA224371	224371	Terrabacteria group	Firmicutes	2.84817	32.8	-	JDIR01	28	3000	2821	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383661	GCA_000560125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/125/GCA_000560125.1_Stap_aure_T66286_V1	-	T66286
Staphylococcus aureus W48872	1410743	PRJNA224374	224374	Terrabacteria group	Firmicutes	2.85967	32.8	-	JDIS01	1	3005	2850	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383663	GCA_000560145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/145/GCA_000560145.1_Stap_aure_W48872_V1	-	W48872
Salmonella enterica subsp. enterica serovar Brandenburg	149387	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.60921	52.2	-	LHJK01	49	4685	4426	8/5/15	2/28/17	Contig	FDA	SAMN03894246	GCA_001243855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/855/GCA_001243855.1_Salmonella_enterica_CVM_N47716_v1.0	-	CVM N47716
Mycobacterium tuberculosis	1773	PRJEB8432	285631	Terrabacteria group	Actinobacteria	4.49739	65.4	-	CEFL01	225	4478	4175	6/1/15	3/11/17	Scaffold	National Institute for Public Health and the Environment (RIVM)	SAMEA3246143	GCA_001049395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/395/GCA_001049395.1_Aethiop_vetus_229	-	Aethiop_vetus_229
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.04832	50.8	-	LEMI01	14	5279	4822	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262735	GCA_002243915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/915/GCA_002243915.1_ASM224391v1	-	67-1202
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08884	39.7	-	CRTS01	105	2297	2101	3/22/15	3/10/17	Contig	SC	SAMEA1025220	GCA_001201095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/095/GCA_001201095.1_6805_4_5	-	SMRU1661
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.90275	66	-	FROQ01	156	6718	6476	12/9/16	3/21/17	Contig	DTU	SAMEA2357478	GCA_900146175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/175/GCA_900146175.1_288	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.90666	39	-	NGHR01	119	3789	3592	5/16/17	5/24/17	Contig	JCVI	SAMN06892209	GCA_002143955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/955/GCA_002143955.1_ASM214395v1	-	ARLG1327
Klebsiella pneumoniae	573	PRJNA385780	385780	Proteobacteria	Gammaproteobacteria	6.02389	56.8	-	NFUI01	100	6176	5868	8/22/17	8/24/17	Contig	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN06909677	GCA_002264315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/315/GCA_002264315.1_ASM226431v1	-	LSK16
Klebsiella pneumoniae	573	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.52578	57.4	-	NPGQ01	83	5701	5414	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07345009	GCA_002264365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/365/GCA_002264365.1_ASM226436v1	-	K4307
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.03699	39	-	NGHN01	73	3961	3823	5/16/17	5/24/17	Contig	JCVI	SAMN06892213	GCA_002143965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/965/GCA_002143965.1_ASM214396v1	-	ARLG1314
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.90723	66	-	FROO01	115	6686	6479	12/9/16	3/21/17	Contig	DTU	SAMEA2357477	GCA_900146185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/185/GCA_900146185.1_287	-	-
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10772	39.6	-	CRMN01	63	2339	2100	3/23/15	3/4/17	Contig	SC	SAMEA1025026	GCA_001201755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/755/GCA_001201755.1_6755_2_8	-	SMRU800
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.09433	50.8	-	LEMJ01	13	5355	4900	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262736	GCA_002243925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/925/GCA_002243925.1_ASM224392v1	-	67-1293
Mycobacterium tuberculosis	1773	PRJEB8432	285631	Terrabacteria group	Actinobacteria	4.45056	65.4	-	CEGB01	224	4441	4145	6/1/15	3/11/17	Scaffold	National Institute for Public Health and the Environment (RIVM)	SAMEA3250476	GCA_001049415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/415/GCA_001049415.1_Assembly_230	-	Aethiop_vetus_230
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.71198	52.1	-	LHJL01	62	4770	4534	8/5/15	2/28/17	Contig	FDA	SAMN03894247	GCA_001243875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/875/GCA_001243875.1_Salmonella_enterica_CVM_N47717_v1.0	-	CVM N47717
Staphylococcus aureus M45245	1410744	PRJNA224375	224375	Terrabacteria group	Firmicutes	2.9022	32.7	-	JDIT01	27	3051	2921	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383664	GCA_000560165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/165/GCA_000560165.1_Stap_aure_M45245_V1	-	M45245
Staphylococcus aureus F90608	1410745	PRJNA224376	224376	Terrabacteria group	Firmicutes	2.87385	32.8	-	JDIU01	2	3019	2868	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383665	GCA_000560185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/185/GCA_000560185.1_Stap_aure_F90608_V1	-	F90608
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91397	51.9	-	LHJN01	71	5011	4758	8/5/15	2/28/17	Contig	FDA	SAMN03894249	GCA_001243905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/905/GCA_001243905.1_Salmonella_enterica_CVM_N47719_v1.0	-	CVM N47719
Mycobacterium tuberculosis	1773	PRJEB8432	285631	Terrabacteria group	Actinobacteria	4.35057	65.4	-	CEFZ01	243	4355	4049	6/1/15	3/11/17	Scaffold	National Institute for Public Health and the Environment (RIVM)	SAMEA3250477	GCA_001049435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/435/GCA_001049435.1_Assembly_232	-	Aethiop_vetus_232
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.87813	50.7	-	LEMK01	19	5016	4689	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262737	GCA_002243975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/975/GCA_002243975.1_ASM224397v1	-	67-1294
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.16067	39.5	-	CRJD01	101	2394	2139	3/23/15	3/6/17	Contig	SC	SAMEA1025187	GCA_001201875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/875/GCA_001201875.1_6753_1_6	-	SMRU1470
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.91128	66	-	FROR01	159	6721	6476	12/9/16	3/21/17	Contig	DTU	SAMEA2357479	GCA_900146195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/195/GCA_900146195.1_289	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.32951	38.7	-	NGHO01	103	4224	4051	5/16/17	5/24/17	Contig	JCVI	SAMN06892212	GCA_002143975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/143/975/GCA_002143975.1_ASM214397v1	-	ARLG1317
Klebsiella pneumoniae	573	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.52908	57.2	-	NPGP01	115	5603	5241	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07345010	GCA_002264425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/425/GCA_002264425.1_ASM226442v1	-	K4311
Klebsiella pneumoniae	573	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.82261	57.1	-	NPGT01	63	5895	5598	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07345006	GCA_002264435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/435/GCA_002264435.1_ASM226443v1	-	K5065
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.99655	39	-	NGHU01	151	3984	3759	5/16/17	5/24/17	Contig	JCVI	SAMN06892204	GCA_002144685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/685/GCA_002144685.1_ASM214468v1	-	ARLG1892
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.91144	66	-	FROU01	129	6696	6471	12/9/16	3/21/17	Contig	DTU	SAMEA2357480	GCA_900146205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/205/GCA_900146205.1_290	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09864	39.6	-	CRTL01	72	2319	2079	3/22/15	3/4/17	Contig	SC	SAMEA1025292	GCA_001201975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/975/GCA_001201975.1_6805_4_18	-	SMRU1674
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.00224	50.7	-	LEMM01	8	5173	4835	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262739	GCA_002243985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/985/GCA_002243985.1_ASM224398v1	-	76-1274
Mycobacterium tuberculosis	1773	PRJEB8432	285631	Terrabacteria group	Actinobacteria	4.48935	65.4	-	CEGA01	224	4464	4168	6/1/15	3/11/17	Scaffold	National Institute for Public Health and the Environment (RIVM)	SAMEA3250478	GCA_001049455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/455/GCA_001049455.1_Assembly_233	-	Aethiop_vetus_233
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.96925	52	-	LHJM01	91	5076	4758	8/5/15	2/28/17	Contig	FDA	SAMN03894248	GCA_001243915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/915/GCA_001243915.1_Salmonella_enterica_CVM_N47718_v1.0	-	CVM N47718
Staphylococcus aureus H57070	1410746	PRJNA224377	224377	Terrabacteria group	Firmicutes	2.82574	32.8	-	JDIV01	63	2950	2802	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383666	GCA_000560205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/205/GCA_000560205.1_Stap_aure_H57070_V1	-	H57070
Staphylococcus aureus F12874	1410747	PRJNA224378	224378	Terrabacteria group	Firmicutes	2.82076	32.8	-	JDIW01	51	2932	2785	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383667	GCA_000560225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/225/GCA_000560225.1_Stap_aure_F12874_V1	-	F12874
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.99124	51.9	-	LHJO01	98	5099	4781	8/5/15	2/28/17	Contig	FDA	SAMN03894250	GCA_001243955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/955/GCA_001243955.1_Salmonella_enterica_CVM_N47720_v1.0	-	CVM N47720
Mycobacterium tuberculosis	1773	PRJEB8432	285631	Terrabacteria group	Actinobacteria	4.30823	65.5	-	CEFY01	241	4315	4019	6/1/15	3/11/17	Scaffold	National Institute for Public Health and the Environment (RIVM)	SAMEA3250479	GCA_001049475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/475/GCA_001049475.1_Assembly_234	-	Aethiop_vetus_234
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.27694	50.4	-	LEMO01	11	5393	5016	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262741	GCA_002244015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/015/GCA_002244015.1_ASM224401v1	-	177-2189
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.06449	39.6	-	CRTB01	64	2288	2049	3/22/15	3/11/17	Contig	SC	SAMEA1025427	GCA_001202155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/155/GCA_001202155.1_6805_3_7	-	SMRU1447
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.9128	66	-	FROT01	105	6686	6477	12/9/16	3/21/17	Contig	DTU	SAMEA2357483	GCA_900146215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/215/GCA_900146215.1_292	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.7814	38.9	-	NGHX01	74	3639	3461	5/16/17	5/24/17	Contig	JCVI	SAMN06892329	GCA_002144695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/695/GCA_002144695.1_ASM214469v1	-	ARLG1898
Klebsiella pneumoniae	573	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.58179	57.3	-	NPGR01	89	5745	5469	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07345008	GCA_002264465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/465/GCA_002264465.1_ASM226446v1	-	K2701
Klebsiella pneumoniae	573	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.72661	57.1	-	NPGV01	99	5936	5612	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07345004	GCA_002264475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/475/GCA_002264475.1_ASM226447v1	-	K4280
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.05888	39	-	NGIA01	94	4019	3860	5/16/17	5/24/17	Contig	JCVI	SAMN06892325	GCA_002144725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/725/GCA_002144725.1_ASM214472v1	-	ARLG1901
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.90367	66	-	FROS01	150	6713	6476	12/9/16	3/21/17	Contig	DTU	SAMEA2357481	GCA_900146225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/225/GCA_900146225.1_291	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.14608	39.6	-	CRTR01	83	2361	2130	3/22/15	3/11/17	Contig	SC	SAMEA1025235	GCA_001202215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/215/GCA_001202215.1_6805_4_6	-	SMRU1662
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.90523	50.7	-	LEMN01	4	5019	4705	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262740	GCA_002244035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/035/GCA_002244035.1_ASM224403v1	-	76-1333
Mycobacterium tuberculosis	1773	PRJNA272470	272470	Terrabacteria group	Actinobacteria	4.36245	65.6	-	LFLI01	161	4290	4083	7/9/15	3/11/17	Scaffold	Institute for Medical Research	SAMN03338741	GCA_001051255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/255/GCA_001051255.1_ASM105125v1	-	MTB221/11
Salmonella enterica subsp. enterica serovar Reading	165302	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.64576	52.2	-	LHJD01	55	4726	4475	8/5/15	2/28/17	Contig	FDA	SAMN03894237	GCA_001243985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/985/GCA_001243985.1_Salmonella_enterica_CVM_N46858_v1.0	-	CVM N46858
Staphylococcus aureus T25611	1410748	PRJNA224379	224379	Terrabacteria group	Firmicutes	2.77559	32.8	-	JDIX01	41	2880	2742	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383668	GCA_000560245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/245/GCA_000560245.1_Stap_aure_T25611_V1	-	T25611
Staphylococcus aureus H69239	1410750	PRJNA224381	224381	Terrabacteria group	Firmicutes	2.85052	32.8	-	JDIY01	57	2991	2867	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383670	GCA_000560265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/265/GCA_000560265.1_Stap_aure_H69239_V1	-	H69239
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.76664	52	-	LHJP01	121	4819	4525	8/5/15	2/28/17	Contig	FDA	SAMN03894251	GCA_001243995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/243/995/GCA_001243995.1_Salmonella_enterica_CVM_N47721_v1.0	-	CVM N47721
Mycobacterium tuberculosis 10	1350393	PRJNA176956	176956	Terrabacteria group	Actinobacteria	4.314	65.5	-	AMYE01	100	4231	3904	11/6/15	3/13/17	Scaffold	BGI Research Institute	SAMN04247103	GCA_001439455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/455/GCA_001439455.1_ASM143945v1	-	10
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.94707	50.5	-	LEML01	13	5077	4807	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262738	GCA_002244045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/045/GCA_002244045.1_ASM224404v1	-	76-972
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07456	39.7	-	CRNP01	64	2288	2074	3/22/15	3/11/17	Contig	SC	SAMEA1024599	GCA_001202435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/435/GCA_001202435.1_6755_4_23	-	SMRU1151
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.31478	66.5	-	FROV01	91	6009	5853	12/9/16	3/21/17	Contig	DTU	SAMEA2357484	GCA_900146235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/235/GCA_900146235.1_293	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.10535	39	-	NGIF01	80	4047	3889	5/16/17	5/24/17	Contig	JCVI	SAMN06892320	GCA_002144755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/755/GCA_002144755.1_ASM214475v1	-	ARLG1914
Klebsiella pneumoniae	573	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.63645	57.2	-	NPGW01	94	5817	5516	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07345003	GCA_002264505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/505/GCA_002264505.1_ASM226450v1	-	K3194
Klebsiella pneumoniae	573	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.58554	57.3	-	NPGS01	104	5745	5463	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07345007	GCA_002264525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/525/GCA_002264525.1_ASM226452v1	-	K2080
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.78082	38.9	-	NGID01	68	3637	3463	5/16/17	5/24/17	Contig	JCVI	SAMN06892322	GCA_002144765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/765/GCA_002144765.1_ASM214476v1	-	ARLG1906
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.68539	66.3	-	FROW01	113	6457	6265	12/9/16	3/21/17	Contig	DTU	SAMEA2357485	GCA_900146245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/245/GCA_900146245.1_294	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.11288	39.7	-	CRLB01	68	2282	2045	3/23/15	3/4/17	Contig	SC	SAMEA1025204	GCA_001202655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/655/GCA_001202655.1_6753_4_4	-	SMRU1540
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.26634	50.4	-	LEMP01	29	5427	5069	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262742	GCA_002244065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/065/GCA_002244065.1_ASM224406v1	-	177-2416
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.33633	65.4	-	LKDM01	284	4362	4094	11/17/15	3/13/17	Scaffold	Columbia University Mailman School of Public Health	SAMN03813802	GCA_001445075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/075/GCA_001445075.1_ASM144507v1	-	H6_7420
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.97692	51.8	-	LHJQ01	118	5027	4718	8/5/15	2/28/17	Contig	FDA	SAMN03894253	GCA_001244005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/005/GCA_001244005.1_Salmonella_enterica_CVM_N47723_v1.0	-	CVM N47723
Staphylococcus aureus M64164	1410751	PRJNA224382	224382	Terrabacteria group	Firmicutes	2.86965	32.7	-	JDIZ01	29	3015	2885	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383671	GCA_000560285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/285/GCA_000560285.1_Stap_aure_M64164_V1	-	M64164
Staphylococcus aureus M67290	1410752	PRJNA224383	224383	Terrabacteria group	Firmicutes	2.92133	32.8	-	JDJA01	25	3106	2933	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383672	GCA_000560305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/305/GCA_000560305.1_Stap_aure_M67290_V1	-	M67290
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.82015	52.2	-	LHJR01	59	4883	4668	8/5/15	2/28/17	Contig	FDA	SAMN03894254	GCA_001244055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/055/GCA_001244055.1_Salmonella_enterica_CVM_N47724_v1.0	-	CVM N47724
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.39304	65.6	-	LKDP01	281	4367	4126	11/17/15	3/13/17	Scaffold	Columbia University Mailman School of Public Health	SAMN03813777	GCA_001445095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/095/GCA_001445095.1_ASM144509v1	-	AH_14271
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.23398	50.7	-	LEMQ01	10	5481	5105	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262743	GCA_002244095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/095/GCA_002244095.1_ASM224409v1	-	215-2730
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.02907	39.6	-	CRWS01	70	2188	1993	3/23/15	3/4/17	Contig	SC	SAMEA1025346	GCA_001202995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/995/GCA_001202995.1_6807_1_7	-	SMRU1567
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.68507	66.3	-	FROX01	135	6473	6257	12/9/16	3/21/17	Contig	DTU	SAMEA2357486	GCA_900146255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/255/GCA_900146255.1_295	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.12789	38.9	-	NGIG01	73	3968	3803	5/16/17	5/24/17	Contig	JCVI	SAMN06892318	GCA_002144795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/795/GCA_002144795.1_ASM214479v1	-	ARLG1929
Klebsiella pneumoniae	573	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.73335	57.2	-	NPGU01	107	5955	5618	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07345005	GCA_002264545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/545/GCA_002264545.1_ASM226454v1	-	K1177
Klebsiella pneumoniae	573	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.5456	57.4	-	NPGX01	100	5707	5425	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07345002	GCA_002264605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/605/GCA_002264605.1_ASM226460v1	-	K2646
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.82243	39.1	-	NGIK01	45	3659	3530	5/16/17	5/24/17	Contig	JCVI	SAMN06892314	GCA_002144805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/805/GCA_002144805.1_ASM214480v1	-	ARLG1936
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.66983	66.3	-	FROY01	115	6440	6249	12/9/16	3/21/17	Contig	DTU	SAMEA2357487	GCA_900146265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/265/GCA_900146265.1_296	-	-
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.0916	39.8	-	CRLF01	59	2297	2082	3/22/15	3/11/17	Contig	SC	SAMEA1024552	GCA_001203035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/035/GCA_001203035.1_6755_1_11	-	SMRU779
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.25728	50.8	-	LEMR01	19	5534	5145	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262744	GCA_002244115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/115/GCA_002244115.1_ASM224411v1	-	215-2646
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.38388	65.5	-	LKDN01	334	4372	4110	11/17/15	3/13/17	Scaffold	Columbia University Mailman School of Public Health	SAMN03813775	GCA_001445155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/155/GCA_001445155.1_ASM144515v1	-	BE3_11657
Salmonella enterica subsp. enterica serovar Agona	58095	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.90263	52	-	LHJT01	78	4994	4744	8/5/15	2/28/17	Contig	FDA	SAMN03894256	GCA_001244085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/085/GCA_001244085.1_Salmonella_enterica_CVM_N47726_v1.0	-	CVM N47726
Staphylococcus aureus W18443	1410753	PRJNA224384	224384	Terrabacteria group	Firmicutes	2.8622	32.8	-	JDJB01	59	3005	2857	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383673	GCA_000560325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/325/GCA_000560325.1_Stap_aure_W18443_V1	-	W18443
Staphylococcus aureus H75198	1410754	PRJNA224385	224385	Terrabacteria group	Firmicutes	2.87238	32.7	-	JDJC01	24	3002	2881	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383674	GCA_000560345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/345/GCA_000560345.1_Stap_aure_H75198_V1	-	H75198
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.82061	52.2	-	LHJS01	51	4884	4671	8/5/15	2/28/17	Contig	FDA	SAMN03894255	GCA_001244095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/095/GCA_001244095.1_Salmonella_enterica_CVM_N47725_v1.0	-	CVM N47725
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.40033	65.5	-	LKDQ01	282	4375	4126	11/17/15	3/13/17	Scaffold	Columbia University Mailman School of Public Health	SAMN03813782	GCA_001445185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/185/GCA_001445185.1_ASM144518v1	-	BE_13443
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.19757	50.7	-	LEMS01	8	5410	5057	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262745	GCA_002244125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/125/GCA_002244125.1_ASM224412v1	-	228-2945
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.02959	39.7	-	CQWM01	177	2193	2019	3/22/15	3/10/17	Contig	SC	SAMEA1024625	GCA_001203215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/215/GCA_001203215.1_6714_7_16	-	SMRU760
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.6379	66.3	-	FROZ01	146	6414	6187	12/9/16	3/21/17	Contig	DTU	SAMEA2357488	GCA_900146275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/275/GCA_900146275.1_297	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.92153	38.9	-	NGIN01	46	3771	3644	5/16/17	5/24/17	Contig	JCVI	SAMN06892310	GCA_002144835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/835/GCA_002144835.1_ASM214483v1	-	ARLG1941
Klebsiella pneumoniae	573	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.61842	57.3	-	NPGZ01	98	5831	5529	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07345000	GCA_002264645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/645/GCA_002264645.1_ASM226464v1	-	K3902
Klebsiella pneumoniae	573	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.55319	57.3	-	NPHC01	104	5725	5438	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07344997	GCA_002264685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/685/GCA_002264685.1_ASM226468v1	-	K3862
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.90208	38.8	-	NGIU01	116	3801	3595	5/16/17	5/24/17	Contig	JCVI	SAMN06892302	GCA_002144915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/915/GCA_002144915.1_ASM214491v1	-	ARLG1962
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.63448	66.3	-	FRPA01	108	6383	6187	12/9/16	3/21/17	Contig	DTU	SAMEA2357489	GCA_900146285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/285/GCA_900146285.1_298	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12188	39.6	-	CRHU01	61	2350	2109	3/23/15	3/11/17	Contig	SC	SAMEA1025561	GCA_001203575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/575/GCA_001203575.1_6736_8_1	-	SMRU1297
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.17227	50.5	-	LEMU01	13	5256	4945	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262747	GCA_002244155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/155/GCA_002244155.1_ASM224415v1	-	265-3386
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.44025	65.5	-	LKHH01	280	4409	4149	11/17/15	3/13/17	Scaffold	Columbia University Mailman School of Public Health	SAMN03813792	GCA_001445235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/235/GCA_001445235.1_ASM144523v1	-	C34_13853
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91466	52.1	-	LHJU01	79	5022	4772	8/5/15	2/28/17	Contig	FDA	SAMN03894258	GCA_001244105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/105/GCA_001244105.1_Salmonella_enterica_CVM_N47728_v1.0	-	CVM N47728
Staphylococcus aureus M64191	1410755	PRJNA224386	224386	Terrabacteria group	Firmicutes	2.87691	32.8	-	JDJD01	2	3026	2874	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383675	GCA_000560365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/365/GCA_000560365.1_Stap_aure_M64191_V1	-	M64191
Staphylococcus aureus M70590	1410756	PRJNA224387	224387	Terrabacteria group	Firmicutes	2.9303	32.8	-	JDJE01	31	3111	2941	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383676	GCA_000560385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/385/GCA_000560385.1_Stap_aure_M70590_V1	-	M70590
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.99185	51.9	-	LHJV01	126	5114	4770	8/5/15	2/28/17	Contig	FDA	SAMN03894259	GCA_001244155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/155/GCA_001244155.1_Salmonella_enterica_CVM_N47729_v1.0	-	CVM N47729
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.36138	65.5	-	LKIH01	325	4343	4092	11/17/15	3/13/17	Scaffold	Columbia University Mailman School of Public Health	SAMN03813795	GCA_001445295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/295/GCA_001445295.1_ASM144529v1	-	C53_20899
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.18488	50.6	-	LEMT01	6	5358	5010	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262746	GCA_002244165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/165/GCA_002244165.1_ASM224416v1	-	228-2998
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08878	39.7	-	CRWC01	74	2244	2009	3/23/15	3/11/17	Contig	SC	SAMEA1025470	GCA_001203775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/775/GCA_001203775.1_6807_1_14	-	SMRU1574
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.62816	66.3	-	FRPB01	145	6402	6190	12/9/16	3/21/17	Contig	DTU	SAMEA2357490	GCA_900146295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/295/GCA_900146295.1_299	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.12132	38.9	-	NGIV01	114	4029	3840	5/16/17	5/24/17	Contig	JCVI	SAMN06892281	GCA_002144925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/925/GCA_002144925.1_ASM214492v1	-	ARLG1864
Klebsiella pneumoniae	573	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.48344	57.4	-	NPHD01	95	5663	5369	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07344996	GCA_002264695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/695/GCA_002264695.1_ASM226469v1	-	K5014
Klebsiella pneumoniae	573	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.62884	57.3	-	NPHA01	96	5841	5542	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07344999	GCA_002264705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/705/GCA_002264705.1_ASM226470v1	-	K3893
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.91914	39	-	NGJB01	111	3841	3670	5/16/17	5/24/17	Contig	JCVI	SAMN06892260	GCA_002144955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/955/GCA_002144955.1_ASM214495v1	-	ARLG1874
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.63461	66.3	-	FRPC01	123	6397	6191	12/9/16	3/21/17	Contig	DTU	SAMEA2357492	GCA_900146305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/305/GCA_900146305.1_300	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.16446	39.5	-	CRSR01	67	2409	2172	3/23/15	3/4/17	Contig	SC	SAMEA1025434	GCA_001204375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/375/GCA_001204375.1_6805_3_17	-	SMRU1457
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.14278	50.5	-	LEMV01	8	5274	4947	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262748	GCA_002244195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/195/GCA_002244195.1_ASM224419v1	-	265-3396
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.4143	65.5	-	LKII01	287	4396	4154	11/17/15	3/13/17	Scaffold	Columbia University Mailman School of Public Health	SAMN03813796	GCA_001445315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/315/GCA_001445315.1_ASM144531v1	-	H_13559
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.98827	51.9	-	LHJW01	125	5105	4769	8/5/15	2/28/17	Contig	FDA	SAMN03894260	GCA_001244185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/185/GCA_001244185.1_Salmonella_enterica_CVM_N47730_v1.0	-	CVM N47730
Staphylococcus aureus T34696	1410757	PRJNA224388	224388	Terrabacteria group	Firmicutes	2.89946	32.7	-	JDJF01	38	3046	2907	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383677	GCA_000560405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/405/GCA_000560405.1_Stap_aure_T34696_V1	-	T34696
Staphylococcus aureus T34703	1410758	PRJNA224389	224389	Terrabacteria group	Firmicutes	2.9162	32.7	-	JDJG01	24	3078	2948	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383678	GCA_000560425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/425/GCA_000560425.1_Stap_aure_T34703_V1	-	T34703
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.66382	52.2	-	LHJX01	60	4742	4502	8/5/15	2/28/17	Contig	FDA	SAMN03894261	GCA_001244215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/215/GCA_001244215.1_Salmonella_enterica_CVM_N48577_v1.0	-	CVM N48577
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.35548	65.4	-	LKIK01	311	4368	4112	11/17/15	3/13/17	Scaffold	Columbia University Mailman School of Public Health	SAMN03813799	GCA_001445335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/335/GCA_001445335.1_ASM144533v1	-	H55_24991
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.14657	50.5	-	LEMW01	9	5301	4963	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262749	GCA_002244205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/205/GCA_002244205.1_ASM224420v1	-	265-3407
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.1375	39.6	-	CRPG01	59	2322	2102	3/23/15	3/4/17	Contig	SC	SAMEA1024608	GCA_001204395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/395/GCA_001204395.1_6775_1_11	-	SMRU827
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.63322	66.3	-	FRPD01	140	6413	6188	12/9/16	3/21/17	Contig	DTU	SAMEA2357493	GCA_900146315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/315/GCA_900146315.1_301	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.88194	38.7	-	NGIY01	49	3801	3630	5/16/17	5/24/17	Contig	JCVI	SAMN06892277	GCA_002144965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/965/GCA_002144965.1_ASM214496v1	-	ARLG1871
Klebsiella pneumoniae	573	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.63221	57.3	-	NPHB01	98	5843	5542	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07344998	GCA_002264715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/715/GCA_002264715.1_ASM226471v1	-	K3871
Klebsiella pneumoniae	573	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.50533	57.4	-	NPHI01	90	5658	5374	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07344991	GCA_002264765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/765/GCA_002264765.1_ASM226476v1	-	K1433
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.7787	39	-	NGJF01	99	3658	3514	5/16/17	5/24/17	Contig	JCVI	SAMN06892256	GCA_002144975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/975/GCA_002144975.1_ASM214497v1	-	ARLG1882
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.60155	66.3	-	FRPE01	126	6381	6175	12/9/16	3/21/17	Contig	DTU	SAMEA2357494	GCA_900146325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/325/GCA_900146325.1_302	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08964	39.6	-	CRUC01	74	2327	2096	3/23/15	3/11/17	Contig	SC	SAMEA1025564	GCA_001204595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/595/GCA_001204595.1_6805_5_18	-	10F
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.15145	50.5	-	LEMX01	17	5271	4948	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262750	GCA_002244235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/235/GCA_002244235.1_ASM224423v1	-	265-3446
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.35856	65.4	-	LKIL01	318	4370	4115	11/17/15	3/13/17	Scaffold	Columbia University Mailman School of Public Health	SAMN03813800	GCA_001445345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/345/GCA_001445345.1_ASM144534v1	-	H6_10443
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.04582	51.8	-	LHJY01	71	5177	4923	8/5/15	2/28/17	Contig	FDA	SAMN03894262	GCA_001244225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/225/GCA_001244225.1_Salmonella_enterica_CVM_N48578_v1.0	-	CVM N48578
Staphylococcus aureus W21472	1410759	PRJNA224390	224390	Terrabacteria group	Firmicutes	2.94308	32.7	-	JDJH01	45	3114	2976	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383679	GCA_000560445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/445/GCA_000560445.1_Stap_aure_W21472_V1	-	W21472
Staphylococcus aureus M73849	1410761	PRJNA224392	224392	Terrabacteria group	Firmicutes	2.77462	32.8	-	JDJI01	51	2883	2749	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383681	GCA_000560465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/465/GCA_000560465.1_Stap_aure_M73849_V1	-	M73849
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.97296	52.1	-	LHJZ01	83	5095	4835	8/5/15	2/28/17	Contig	FDA	SAMN03894263	GCA_001244255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/255/GCA_001244255.1_Salmonella_enterica_CVM_N48676_v1.0	-	CVM N48676
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.51033	65.5	-	LKIO01	314	4488	4247	11/17/15	3/13/17	Scaffold	Columbia University Mailman School of Public Health	SAMN03813804	GCA_001445395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/395/GCA_001445395.1_ASM144539v1	-	KI_19771
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.16732	50.5	-	LEMY01	8	5307	4954	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262751	GCA_002244245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/245/GCA_002244245.1_ASM224424v1	-	272-3479
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.111	39.7	-	CRQW01	63	2356	2119	3/23/15	3/11/17	Contig	SC	SAMEA1025042	GCA_001204655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/655/GCA_001204655.1_6791_6_24	-	SMRU648
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.63355	66.3	-	FRPF01	129	6399	6185	12/9/16	3/21/17	Contig	DTU	SAMEA2357495	GCA_900146335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/335/GCA_900146335.1_303	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.89662	38.8	-	NGJD01	45	3767	3597	5/16/17	5/24/17	Contig	JCVI	SAMN06892258	GCA_002144995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/995/GCA_002144995.1_ASM214499v1	-	ARLG1880
Klebsiella pneumoniae	573	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.47814	57.4	-	NPHE01	86	5650	5361	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07344995	GCA_002264775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/775/GCA_002264775.1_ASM226477v1	-	K5012
Klebsiella pneumoniae	573	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.64363	57.2	-	NPHF01	99	5844	5495	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07344994	GCA_002264785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/785/GCA_002264785.1_ASM226478v1	-	K3175
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.84233	38.9	-	NGJG01	96	3720	3577	5/16/17	5/24/17	Contig	JCVI	SAMN06892254	GCA_002145035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/145/035/GCA_002145035.1_ASM214503v1	-	ARLG1885
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.60207	66.3	-	FRPG01	88	6363	6179	12/9/16	3/21/17	Contig	DTU	SAMEA2357496	GCA_900146345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/345/GCA_900146345.1_304	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08501	39.7	-	CRXM01	63	2303	2096	3/23/15	3/4/17	Contig	SC	SAMEA1025412	GCA_001204785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/785/GCA_001204785.1_6807_2_3	-	SMRU1587
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.03806	50.5	-	LENC01	8	5078	4729	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262755	GCA_002244275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/275/GCA_002244275.1_ASM224427v1	-	323-4035
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.39278	65.4	-	LKIQ01	408	4483	4103	11/17/15	3/13/17	Scaffold	Columbia University Mailman School of Public Health	SAMN03813806	GCA_001445415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/415/GCA_001445415.1_ASM144541v1	-	V_13678
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.97446	52.1	-	LHKA01	83	5101	4836	8/5/15	2/28/17	Contig	FDA	SAMN03894264	GCA_001244285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/285/GCA_001244285.1_Salmonella_enterica_CVM_N48677_v1.0	-	CVM N48677
Staphylococcus aureus W24216	1410762	PRJNA224393	224393	Terrabacteria group	Firmicutes	2.97856	32.7	-	JDJJ01	44	3161	3012	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383682	GCA_000560485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/485/GCA_000560485.1_Stap_aure_W24216_V1	-	W24216
Staphylococcus aureus H81437	1410763	PRJNA224394	224394	Terrabacteria group	Firmicutes	2.87297	32.8	-	JDJK01	2	3026	2872	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383683	GCA_000560505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/505/GCA_000560505.1_Stap_aure_H81437_V1	-	H81437
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.85786	52.1	-	LHKB01	62	4969	4732	8/5/15	2/28/17	Contig	FDA	SAMN03894265	GCA_001244325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/325/GCA_001244325.1_Salmonella_enterica_CVM_N48678_v1.0	-	CVM N48678
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.36222	65.4	-	LKIJ01	316	4381	4114	11/17/15	3/13/17	Scaffold	Columbia University Mailman School of Public Health	SAMN03813797	GCA_001445435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/435/GCA_001445435.1_ASM144543v1	-	H_13571
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.12222	50.5	-	LENA01	14	5235	4898	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262753	GCA_002244295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/295/GCA_002244295.1_ASM224429v1	-	272-3695
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10399	39.5	-	CRVB01	57	2321	2101	3/23/15	3/10/17	Contig	SC	SAMEA1025125	GCA_001204835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/835/GCA_001204835.1_6805_6_3	-	SMRU1707
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.51385	66.3	-	FRPH01	139	6312	6092	12/9/16	3/21/17	Contig	DTU	SAMEA2357498	GCA_900146355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/355/GCA_900146355.1_306	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.96973	38.8	-	NGHV01	84	3866	3726	5/16/17	5/24/17	Contig	JCVI	SAMN06892331	GCA_002145055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/145/055/GCA_002145055.1_ASM214505v1	-	ARLG1893
Klebsiella pneumoniae	573	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.82904	57	-	NPHG01	108	6078	5709	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07344993	GCA_002264795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/795/GCA_002264795.1_ASM226479v1	-	K4803
Klebsiella pneumoniae	573	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.66943	57	-	NPHL01	65	5718	5410	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07344988	GCA_002264845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/845/GCA_002264845.1_ASM226484v1	-	K604
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.07745	38.9	-	NGJH01	75	4003	3855	5/16/17	5/24/17	Contig	JCVI	SAMN06892206	GCA_002145065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/145/065/GCA_002145065.1_ASM214506v1	-	ARLG1886
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.61013	66.3	-	FRPI01	125	6407	6187	12/9/16	3/21/17	Contig	DTU	SAMEA2357497	GCA_900146365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/365/GCA_900146365.1_305	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.15906	39.5	-	CROK01	78	2387	2156	3/22/15	3/11/17	Contig	SC	SAMEA1025651	GCA_001204915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/915/GCA_001204915.1_6755_5_24	-	SMRU1176
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.04216	50.5	-	LEND01	3	5074	4725	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262756	GCA_002244315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/315/GCA_002244315.1_ASM224431v1	-	323-4041
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.39187	65.5	-	LKIN01	327	4400	4142	11/17/15	3/13/17	Scaffold	Columbia University Mailman School of Public Health	SAMN03813803	GCA_001445445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/445/GCA_001445445.1_ASM144544v1	-	I_15762
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.01835	52.1	-	LHKC01	95	5164	4914	8/5/15	2/28/17	Contig	FDA	SAMN03894266	GCA_001244335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/335/GCA_001244335.1_Salmonella_enterica_CVM_N48679_v1.0	-	CVM N48679
Staphylococcus aureus T41081	1410764	PRJNA224395	224395	Terrabacteria group	Firmicutes	2.83112	32.8	-	JDJL01	70	2950	2794	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383684	GCA_000560525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/525/GCA_000560525.1_Stap_aure_T41081_V1	-	T41081
Staphylococcus aureus T28847	1410765	PRJNA224396	224396	Terrabacteria group	Firmicutes	2.83109	32.8	-	JDJM01	62	2953	2798	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383685	GCA_000560545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/545/GCA_000560545.1_Stap_aure_T28847_V1	-	T28847
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.74864	52	-	LHKE01	73	4868	4630	8/5/15	2/28/17	Contig	FDA	SAMN03894269	GCA_001244375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/375/GCA_001244375.1_Salmonella_enterica_CVM_N48682_v1.0	-	CVM N48682
Mycobacterium tuberculosis OSDD071	1126682	PRJNA78807	78807	Terrabacteria group	Actinobacteria	4.28512	65.5	-	AHHX01	660	4361	3989	12/28/11	5/18/17	Contig	Open Source Drug Discovery	SAMN02469671	GCA_000240245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/245/GCA_000240245.2_MycTub_OSDD071	-	OSDD071
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.97801	50.5	-	LENE01	5	5111	4808	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262757	GCA_002244335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/335/GCA_002244335.1_ASM224433v1	-	6-121
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.15638	39.5	-	CRLK01	76	2399	2155	3/22/15	3/11/17	Contig	SC	SAMEA1025079	GCA_001205095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/095/GCA_001205095.1_6755_1_17	-	SMRU785
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.61018	66.3	-	FRPJ01	109	6381	6178	12/9/16	3/21/17	Contig	DTU	SAMEA2357499	GCA_900146375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/375/GCA_900146375.1_307	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.78695	38.9	-	NGJI01	66	3636	3467	5/16/17	5/24/17	Contig	JCVI	SAMN06892205	GCA_002145095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/145/095/GCA_002145095.1_ASM214509v1	-	ARLG1891
Klebsiella pneumoniae	573	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.65906	57.2	-	NPHH01	115	5879	5545	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07344992	GCA_002264855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/855/GCA_002264855.1_ASM226485v1	-	K2147
Klebsiella pneumoniae	573	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.44797	57.4	-	NPHJ01	96	5612	5316	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07344990	GCA_002264905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/905/GCA_002264905.1_ASM226490v1	-	K669
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.94668	39	-	NGHZ01	129	3848	3678	5/16/17	5/24/17	Contig	JCVI	SAMN06892326	GCA_002145115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/145/115/GCA_002145115.1_ASM214511v1	-	ARLG1900
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.66707	66.1	-	FRPL01	152	6446	6224	12/9/16	3/21/17	Contig	DTU	SAMEA2357500	GCA_900146385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/385/GCA_900146385.1_308	-	-
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.19812	39.5	-	CRPX01	64	2463	2223	3/23/15	3/10/17	Contig	SC	SAMEA1024596	GCA_001205155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/155/GCA_001205155.1_6775_2_11	-	SMRU851
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.9596	50.5	-	LENF01	3	5081	4775	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262758	GCA_002244355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/355/GCA_002244355.1_ASM224435v1	-	6-171
Mycobacterium tuberculosis OSDD504	1126683	PRJNA78959	78959	Terrabacteria group	Actinobacteria	4.22664	65.4	-	AHHY01	1040	4454	3891	12/28/11	5/18/17	Contig	Open Source Drug Discovery	SAMN02469672	GCA_000240265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/265/GCA_000240265.2_MycTub_OSDD504	-	OSDD504
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.97077	52.1	-	LHKD01	80	5096	4846	8/5/15	2/28/17	Contig	FDA	SAMN03894267	GCA_001244385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/385/GCA_001244385.1_Salmonella_enterica_CVM_N48680_v1.0	-	CVM N48680
Staphylococcus aureus H84489	1410766	PRJNA224397	224397	Terrabacteria group	Firmicutes	2.74756	32.8	-	JDJN01	51	2846	2717	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383686	GCA_000560565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/565/GCA_000560565.1_Stap_aure_H84489_V1	-	H84489
Staphylococcus aureus H84492	1410767	PRJNA224398	224398	Terrabacteria group	Firmicutes	2.87632	32.8	-	JDJO01	2	3030	2877	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383687	GCA_000560585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/585/GCA_000560585.1_Stap_aure_H84492_V1	-	H84492
Salmonella enterica subsp. enterica serovar Reading	165302	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.64832	52.2	-	LHKG01	63	4730	4475	8/5/15	2/28/17	Contig	FDA	SAMN03894271	GCA_001244455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/455/GCA_001244455.1_Salmonella_enterica_CVM_N48684_v1.0	-	CVM N48684
Mycobacterium tuberculosis OSDD518	1126684	PRJNA78961	78961	Terrabacteria group	Actinobacteria	4.2668	65.5	-	AHHZ01	685	4344	3958	12/28/11	5/18/17	Contig	Open Source Drug Discovery	SAMN02469670	GCA_000240285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/285/GCA_000240285.2_MycTub_OSDD518	-	OSDD518
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.26505	50.8	-	LENJ01	22	5484	5105	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262762	GCA_002244375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/375/GCA_002244375.1_ASM224437v1	-	25-462
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10129	39.6	-	CRUY01	40	2286	2050	3/22/15	3/11/17	Contig	SC	SAMEA1025437	GCA_001205375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/375/GCA_001205375.1_6805_6_22	-	SMRU1726
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.67606	66.1	-	FRPK01	138	6446	6228	12/9/16	3/21/17	Contig	DTU	SAMEA2357501	GCA_900146395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/395/GCA_900146395.1_309	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.82485	38.8	-	NGHW01	103	3723	3548	5/16/17	5/24/17	Contig	JCVI	SAMN06892330	GCA_002145125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/145/125/GCA_002145125.1_ASM214512v1	-	ARLG1896
Klebsiella pneumoniae	573	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.45101	57.4	-	NPHK01	96	5615	5323	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07344989	GCA_002264915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/915/GCA_002264915.1_ASM226491v1	-	K666
Klebsiella pneumoniae	573	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.81062	57	-	NPHM01	95	6024	5682	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07344987	GCA_002264925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/925/GCA_002264925.1_ASM226492v1	-	K85
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.76073	38.8	-	NGIB01	49	3622	3488	5/16/17	5/24/17	Contig	JCVI	SAMN06892324	GCA_002145155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/145/155/GCA_002145155.1_ASM214515v1	-	ARLG1902
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.67826	66.1	-	FRPM01	116	6427	6233	12/9/16	3/21/17	Contig	DTU	SAMEA2357504	GCA_900146405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/405/GCA_900146405.1_311	-	-
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.15041	39.6	-	CRVX01	49	2380	2144	3/23/15	3/11/17	Contig	SC	SAMEA1026118	GCA_001205475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/475/GCA_001205475.1_6805_7_4	-	SMRU1732
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.28675	50.8	-	LENI01	19	5545	5152	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262761	GCA_002244385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/385/GCA_002244385.1_ASM224438v1	-	25-468
Mycobacterium tuberculosis CTRI-4	707237	PRJNA43175	43175	Terrabacteria group	Actinobacteria	4.32157	65.4	-	AIIE01	44	4276	4081	3/26/12	5/18/17	Contig	"Research Institute for Physical-Chemical Medicine, Moscow, Russia"	SAMN02470833	GCA_000256525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/256/525/GCA_000256525.1_ASM25652v1	23437175	CTRI-4
Salmonella enterica subsp. enterica serovar Agona	58095	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.98697	51.9	-	LHKF01	123	5131	4866	8/5/15	2/28/17	Contig	FDA	SAMN03894270	GCA_001244465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/465/GCA_001244465.1_Salmonella_enterica_CVM_N48683_v1.0	-	CVM N48683
Staphylococcus aureus H84507	1410768	PRJNA224399	224399	Terrabacteria group	Firmicutes	2.85591	32.8	-	JDJP01	23	3000	2863	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383688	GCA_000560605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/605/GCA_000560605.1_Stap_aure_H84507_V1	-	H84507
Staphylococcus aureus F40814	1410769	PRJNA224400	224400	Terrabacteria group	Firmicutes	2.82062	32.8	-	JDJQ01	59	2949	2805	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383689	GCA_000560625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/625/GCA_000560625.1_Stap_aure_F40814_V1	-	F40814
Salmonella enterica subsp. enterica serovar Derby	28144	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.94197	52	-	LHKH01	89	5057	4793	8/5/15	2/28/17	Contig	FDA	SAMN03894272	GCA_001244515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/515/GCA_001244515.1_Salmonella_enterica_CVM_N48685_v1.0	-	CVM N48685
Mycobacterium tuberculosis UM 1072388579	1240677	PRJNA176960	176960	Terrabacteria group	Actinobacteria	4.35238	65.4	-	AMXW02	80	4305	4084	11/9/12	3/11/17	Contig	UNIVERSITY OF MALAYA	SAMN02471862	GCA_000313215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/215/GCA_000313215.2_ASM31321v2	23405310	UM 1072388579
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.28335	50.7	-	LENK01	36	5443	5077	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262763	GCA_002244415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/415/GCA_002244415.1_ASM224441v1	-	25-541
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09422	39.7	-	CRFS01	66	2294	2091	3/23/15	3/4/17	Contig	SC	SAMEA1025593	GCA_001205575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/575/GCA_001205575.1_6736_5_1	-	SMRU1225
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.67858	66.1	-	FRPN01	111	6432	6234	12/9/16	3/21/17	Contig	DTU	SAMEA2357506	GCA_900146415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/415/GCA_900146415.1_312	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.0054	39	-	NGIE01	156	3988	3759	5/16/17	5/24/17	Contig	JCVI	SAMN06892321	GCA_002145175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/145/175/GCA_002145175.1_ASM214517v1	-	ARLG1907
Klebsiella pneumoniae	573	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.66383	57.3	-	NPHN01	105	5875	5561	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07344986	GCA_002265015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/015/GCA_002265015.1_ASM226501v1	-	K3657
Klebsiella pneumoniae	573	PRJNA375812	375812	Proteobacteria	Gammaproteobacteria	5.59937	57.2	-	NIAC01	368	5754	5427	8/24/17	8/27/17	Contig	University of Pittsburgh School of Medicine	SAMN06445941	GCA_002268655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/655/GCA_002268655.1_ASM226865v1	-	H5
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.86971	38.9	-	NGIC01	197	3773	3623	5/16/17	5/24/17	Contig	JCVI	SAMN06892323	GCA_002145195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/145/195/GCA_002145195.1_ASM214519v1	-	ARLG1904
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.68117	66.1	-	FRPO01	114	6438	6235	12/9/16	3/21/17	Contig	DTU	SAMEA2357507	GCA_900146425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/425/GCA_900146425.1_313	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09087	39.7	-	CRUM01	68	2310	2087	3/23/15	3/4/17	Contig	SC	SAMEA1025339	GCA_001205595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/595/GCA_001205595.1_6805_5_7	-	SMRU1687
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.1627	50.6	-	LENL01	8	5203	4908	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262764	GCA_002244425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/425/GCA_002244425.1_ASM224442v1	-	31-442
Mycobacterium tuberculosis PR05	1279011	PRJNA185398	185398	Terrabacteria group	Actinobacteria	4.31436	65.4	-	AOMG02	224	4287	3985	4/19/13	3/13/17	Contig	Universiti Teknologi MARA	SAMN02471435	GCA_000372545.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/545/GCA_000372545.3_MTB_PR05_version_2	23788553	PR05
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.07746	52	-	LHKL01	130	5242	4978	8/5/15	2/28/17	Contig	FDA	SAMN03894277	GCA_001244695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/695/GCA_001244695.1_Salmonella_enterica_CVM_N48690_v1.0	-	CVM N48690
Staphylococcus aureus T28854	1410770	PRJNA224401	224401	Terrabacteria group	Firmicutes	2.81982	32.8	-	JDJR01	59	2935	2785	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383690	GCA_000560645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/645/GCA_000560645.1_Stap_aure_T28854_V1	-	T28854
Staphylococcus aureus M80333	1410772	PRJNA224403	224403	Terrabacteria group	Firmicutes	2.77454	32.8	-	JDJS01	49	2871	2744	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383692	GCA_000560665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/665/GCA_000560665.1_Stap_aure_M80333_V1	-	M80333
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.06013	52	-	LHKK01	114	5211	4953	8/5/15	2/28/17	Contig	FDA	SAMN03894276	GCA_001244705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/705/GCA_001244705.1_Salmonella_enterica_CVM_N48689_v1.0	-	CVM N48689
Mycobacterium tuberculosis 43-16836	1348776	PRJNA209239	209239	Terrabacteria group	Actinobacteria	4.38194	65.5	-	ATNF01	154	4333	4016	9/9/13	3/8/17	Contig	National Center for Genetic Engineering and Biotechnology	SAMN02470609	GCA_000465305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/305/GCA_000465305.1_MTB_43-16836	24092792	43-16836
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.0442	50.5	-	LENB01	5	5078	4732	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262754	GCA_002244455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/455/GCA_002244455.1_ASM224445v1	-	323-3993
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08468	39.6	-	CRKI01	63	2291	2067	3/23/15	3/4/17	Contig	SC	SAMEA1025625	GCA_001205655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/655/GCA_001205655.1_6753_3_5	-	SMRU1517
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.6685	66.1	-	FRPP01	83	6403	6233	12/9/16	3/21/17	Contig	DTU	SAMEA2357508	GCA_900146435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/435/GCA_900146435.1_314	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.83504	38.9	-	NGIM01	82	3730	3540	5/16/17	5/24/17	Contig	JCVI	SAMN06892311	GCA_002145255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/145/255/GCA_002145255.1_ASM214525v1	-	ARLG1940
Klebsiella pneumoniae	573	PRJNA375812	375812	Proteobacteria	Gammaproteobacteria	5.48259	57.2	-	NIAH01	212	5645	5379	8/24/17	8/27/17	Contig	University of Pittsburgh School of Medicine	SAMN06445936	GCA_002268675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/675/GCA_002268675.1_ASM226867v1	-	F2
Klebsiella pneumoniae	573	PRJNA375812	375812	Proteobacteria	Gammaproteobacteria	5.4406	57.2	-	NIAI01	881	5455	5045	8/24/17	8/27/17	Contig	University of Pittsburgh School of Medicine	SAMN06445935	GCA_002268715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/715/GCA_002268715.1_ASM226871v1	-	E6
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.80252	39.1	-	NGIP01	223	3789	3437	5/16/17	5/24/17	Contig	JCVI	SAMN06892308	GCA_002145295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/145/295/GCA_002145295.1_ASM214529v1	-	ARLG1946
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.68066	66.1	-	FRPT01	88	6415	6235	12/9/16	3/21/17	Contig	DTU	SAMEA2357509	GCA_900146445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/445/GCA_900146445.1_315	-	-
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.15949	39.5	-	CRVP01	52	2397	2174	3/23/15	3/4/17	Contig	SC	SAMEA1025710	GCA_001205695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/695/GCA_001205695.1_6805_7_18	-	SMRU1747
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.09499	50.4	-	LENN01	26	5124	4740	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262766	GCA_002244465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/465/GCA_002244465.1_ASM224446v1	-	31-679
Mycobacterium tuberculosis OM-V02_005	1338505	PRJDB1129	231359	Terrabacteria group	Actinobacteria	3.91405	65.5	-	BARZ01	121	3890	3697	6/11/13	3/8/17	Contig	Osaka City University	SAMD00036742	GCA_000509285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/509/285/GCA_000509285.1_Mintra_1.0	23929492	OM-V02_005
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.96352	51.8	-	LHKJ01	118	5033	4706	8/5/15	2/28/17	Contig	FDA	SAMN03894275	GCA_001244715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/715/GCA_001244715.1_Salmonella_enterica_CVM_N48688_v1.0	-	CVM N48688
Staphylococcus aureus F43676	1410773	PRJNA224404	224404	Terrabacteria group	Firmicutes	2.87594	32.8	-	JDJT01	2	3028	2871	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383693	GCA_000560685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/685/GCA_000560685.1_Stap_aure_F43676_V1	-	F43676
Staphylococcus aureus T47181	1410774	PRJNA224405	224405	Terrabacteria group	Firmicutes	2.86148	32.8	-	JDJU01	30	3000	2866	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383694	GCA_000560705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/705/GCA_000560705.1_Stap_aure_T47181_V1	-	T47181
Salmonella enterica subsp. enterica serovar Derby	28144	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.90332	52	-	LHKI01	228	5024	4751	8/5/15	2/28/17	Contig	FDA	SAMN03894273	GCA_001244725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/725/GCA_001244725.1_Salmonella_enterica_CVM_N48686_v1.0	-	CVM N48686
Mycobacterium tuberculosis HM	1432058	PRJNA230410	230410	Terrabacteria group	Actinobacteria	4.32056	65.5	-	AZHK01	195	4365	3955	12/18/13	3/8/17	Contig	Institut Pasteur Montevideo	SAMN02597365	GCA_000510935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/510/935/GCA_000510935.1_HMscaffold	24459279	HM
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.90113	50.6	-	LENM01	13	5064	4751	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262765	GCA_002244475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/475/GCA_002244475.1_ASM224447v1	-	31-678
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08732	39.5	-	CRIF01	54	2285	2067	3/23/15	3/4/17	Contig	SC	SAMEA1025467	GCA_001205975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/975/GCA_001205975.1_6736_8_24	-	SMRU1320
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.67655	66.1	-	FRPR01	88	6411	6238	12/9/16	3/21/17	Contig	DTU	SAMEA2357510	GCA_900146455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/455/GCA_900146455.1_316	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.99335	38.8	-	NGIZ01	56	3925	3747	5/16/17	5/24/17	Contig	JCVI	SAMN06892276	GCA_002145375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/145/375/GCA_002145375.1_ASM214537v1	-	ARLG1872
Klebsiella pneumoniae	573	PRJNA375812	375812	Proteobacteria	Gammaproteobacteria	5.63562	57.1	-	NIAN01	265	5794	5491	8/24/17	8/27/17	Contig	University of Pittsburgh School of Medicine	SAMN06445930	GCA_002268725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/725/GCA_002268725.1_ASM226872v1	-	C4
Klebsiella pneumoniae	573	PRJNA375812	375812	Proteobacteria	Gammaproteobacteria	5.62346	57.1	-	NIAE01	371	5801	5472	8/24/17	8/27/17	Contig	University of Pittsburgh School of Medicine	SAMN06445939	GCA_002268755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/755/GCA_002268755.1_ASM226875v1	-	F9
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.77392	39.1	-	NGJA01	229	3817	3485	5/16/17	5/24/17	Contig	JCVI	SAMN06892275	GCA_002145395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/145/395/GCA_002145395.1_ASM214539v1	-	ARLG1873
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.67955	66.1	-	FRPS01	90	6411	6234	12/9/16	3/21/17	Contig	DTU	SAMEA2357517	GCA_900146465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/465/GCA_900146465.1_321	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.17819	39.7	-	CROT01	59	2426	2180	3/23/15	3/4/17	Contig	SC	SAMEA1025570	GCA_001206035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/035/GCA_001206035.1_6755_6_12	-	SMRU1188
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.25832	50.8	-	LENO01	9	5495	5121	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262767	GCA_002244515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/515/GCA_002244515.1_ASM224451v1	-	58-809
Mycobacterium tuberculosis MTB-476	1429887	PRJNA229943	229943	Terrabacteria group	Actinobacteria	4.29719	65.2	-	AZBA01	237	4323	4052	12/27/13	3/8/17	Contig	"Center for Life Sciences, Nazarbayev University"	SAMN02597332	GCA_000512045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/045/GCA_000512045.1_MTB-476	25977436	MTB-476
Salmonella enterica subsp. enterica serovar Albany	211968	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.85763	52.1	-	LHKN01	119	4938	4698	8/5/15	2/28/17	Contig	FDA	SAMN03894279	GCA_001244795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/795/GCA_001244795.1_Salmonella_enterica_CVM_N48692_v1.0	-	CVM N48692
Staphylococcus aureus W33796	1410775	PRJNA224406	224406	Terrabacteria group	Firmicutes	2.8758	32.8	-	JDJV01	2	3027	2871	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383695	GCA_000560725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/725/GCA_000560725.1_Stap_aure_W33796_V1	-	W33796
Staphylococcus aureus F46632	1410777	PRJNA224408	224408	Terrabacteria group	Firmicutes	2.93166	32.7	-	JDJW01	42	3110	2967	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383697	GCA_000560745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/745/GCA_000560745.1_Stap_aure_F46632_V1	-	F46632
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.64411	52.3	-	LHKO01	76	4698	4462	8/5/15	2/28/17	Contig	FDA	SAMN03894280	GCA_001244805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/805/GCA_001244805.1_Salmonella_enterica_CVM_N48693_v1.0	-	CVM N48693
Mycobacterium tuberculosis MTB-489	1429886	PRJNA229941	229941	Terrabacteria group	Actinobacteria	4.25957	65.3	-	AZAZ01	177	4276	4047	12/27/13	3/8/17	Contig	"Center for Life Sciences, Nazarbayev University"	SAMN02597331	GCA_000512065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/065/GCA_000512065.1_MTB-489	25977436	MTB-489
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.24167	50.8	-	LENP01	10	5458	5085	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262768	GCA_002244535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/535/GCA_002244535.1_ASM224453v1	-	58-882
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.16657	39.7	-	CRAA01	92	2318	2018	3/23/15	3/6/17	Contig	SC	SAMEA1025107	GCA_001206055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/055/GCA_001206055.1_6730_6_16	-	SMRU688
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.67612	66.1	-	FRPV01	80	6406	6237	12/9/16	3/21/17	Contig	DTU	SAMEA2357518	GCA_900146475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/475/GCA_900146475.1_322	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.95286	39	-	NGJE01	147	3918	3705	5/16/17	5/24/17	Contig	JCVI	SAMN06892257	GCA_002145435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/145/435/GCA_002145435.1_ASM214543v1	-	ARLG1881
Klebsiella pneumoniae	573	PRJNA375812	375812	Proteobacteria	Gammaproteobacteria	5.51846	57.2	-	NIAJ01	295	5664	5374	8/24/17	8/27/17	Contig	University of Pittsburgh School of Medicine	SAMN06445934	GCA_002268775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/775/GCA_002268775.1_ASM226877v1	-	E5
Klebsiella pneumoniae	573	PRJNA375812	375812	Proteobacteria	Gammaproteobacteria	5.60429	57.1	-	NIAO01	288	5766	5464	8/24/17	8/27/17	Contig	University of Pittsburgh School of Medicine	SAMN06445929	GCA_002268785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/785/GCA_002268785.1_ASM226878v1	-	C3
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.23478	39	-	NGHY01	106	4213	4044	5/16/17	5/24/17	Contig	JCVI	SAMN06892328	GCA_002148725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/725/GCA_002148725.1_ASM214872v1	-	ARLG1899
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.67532	66.1	-	FRPQ01	117	6428	6230	12/9/16	3/21/17	Contig	DTU	SAMEA2357512	GCA_900146485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/485/GCA_900146485.1_318	-	-
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11582	39.7	-	CRLO01	60	2354	2105	3/23/15	3/6/17	Contig	SC	SAMEA1024871	GCA_001206075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/075/GCA_001206075.1_6755_1_23	-	SMRU791
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.25137	50.8	-	LENQ01	13	5487	5112	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262769	GCA_002244545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/545/GCA_002244545.1_ASM224454v1	-	58-1129
Mycobacterium tuberculosis XDR1219	1151113	PRJNA85129	85129	Terrabacteria group	Actinobacteria	4.31996	65.5	-	AJGO01	170	4282	4058	1/7/14	3/9/17	Contig	"State Key Lab of Genetic Engineering, College of Life Sciences, Fudan University, Shanghai 200433, P.R.China"	SAMN02597361	GCA_000516395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/395/GCA_000516395.1_XDR1219	23801408	XDR1219
"Salmonella enterica subsp. enterica serovar 4,12:i:-"	353569	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.97398	52.1	-	LHKM01	168	5158	4890	8/5/15	5/30/17	Contig	FDA	SAMN03894278	GCA_001244815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/815/GCA_001244815.1_Salmonella_enterica_CVM_N48691_v1.0	-	CVM N48691
Staphylococcus aureus W39902	1410778	PRJNA224409	224409	Terrabacteria group	Firmicutes	2.84516	32.8	-	JDJX01	70	2982	2820	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383698	GCA_000560765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/765/GCA_000560765.1_Stap_aure_W39902_V1	-	W39902
Staphylococcus aureus H15665	1410779	PRJNA224410	224410	Terrabacteria group	Firmicutes	2.88197	32.8	-	JDJY01	77	3028	2866	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383699	GCA_000560785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/785/GCA_000560785.1_Stap_aure_H15665_V1	-	H15665
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.66606	52.2	-	LHKP01	62	4751	4502	8/5/15	2/28/17	Contig	FDA	SAMN03894281	GCA_001244865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/865/GCA_001244865.1_Salmonella_enterica_CVM_N48694_v1.0	-	CVM N48694
Mycobacterium tuberculosis WX3	1160716	PRJNA88527	88527	Terrabacteria group	Actinobacteria	4.31051	65.5	-	AJGL01	160	4284	4048	1/7/14	3/9/17	Contig	Fudan University	SAMN02597358	GCA_000516415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/415/GCA_000516415.1_WX3	23801408	WX3
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.85295	50.4	-	LENR01	7	4932	4620	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262770	GCA_002244575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/575/GCA_002244575.1_ASM224457v1	-	92-1246
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.097	39.6	-	CRPS01	63	2293	2059	3/23/15	3/11/17	Contig	SC	SAMEA1024729	GCA_001206135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/135/GCA_001206135.1_6775_1_4	-	SMRU820
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.68027	66.1	-	FRPX01	111	6434	6232	12/9/16	3/21/17	Contig	DTU	SAMEA2357514	GCA_900146495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/495/GCA_900146495.1_319	-	-
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.75998	39	-	NGIJ01	34	3597	3491	5/16/17	5/24/17	Contig	JCVI	SAMN06892315	GCA_002148735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/735/GCA_002148735.1_ASM214873v1	-	ARLG1935
Klebsiella pneumoniae	573	PRJNA375812	375812	Proteobacteria	Gammaproteobacteria	5.58918	57.1	-	NIAR01	324	5729	5434	8/24/17	8/27/17	Contig	University of Pittsburgh School of Medicine	SAMN06445926	GCA_002268815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/815/GCA_002268815.1_ASM226881v1	-	B8
Klebsiella pneumoniae	573	PRJNA375812	375812	Proteobacteria	Gammaproteobacteria	5.51634	57.2	-	NIAA01	284	5662	5376	8/24/17	8/27/17	Contig	University of Pittsburgh School of Medicine	SAMN06445943	GCA_002268825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/825/GCA_002268825.1_ASM226882v1	-	I2
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	3.78191	38.8	-	NGII01	44	3617	3469	5/16/17	5/24/17	Contig	JCVI	SAMN06892316	GCA_002148745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/148/745/GCA_002148745.1_ASM214874v1	-	ARLG1933
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.67766	66.1	-	FRPW01	90	6412	6232	12/9/16	3/21/17	Contig	DTU	SAMEA2357516	GCA_900146505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/505/GCA_900146505.1_320	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.13599	39.6	-	CRGK01	61	2362	2167	3/22/15	3/10/17	Contig	SC	SAMEA1025365	GCA_001206175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/175/GCA_001206175.1_6736_5_9	-	SMRU1233
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.84184	50.4	-	LENT01	11	4924	4620	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262772	GCA_002244595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/595/GCA_002244595.1_ASM224459v1	-	92-1405
Mycobacterium tuberculosis XDR1221	1160714	PRJNA88523	88523	Terrabacteria group	Actinobacteria	4.3042	65.5	-	AJGN01	214	4322	4038	1/7/14	3/9/17	Contig	Fudan University	SAMN02597360	GCA_000516435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/435/GCA_000516435.1_XDR1221	23801408	XDR1221
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.80602	52.1	-	LHKR01	124	4936	4695	8/5/15	2/28/17	Contig	FDA	SAMN03894283	GCA_001244895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/895/GCA_001244895.1_Salmonella_enterica_CVM_N48696_v1.0	-	CVM N48696
Staphylococcus aureus F52748	1410781	PRJNA224412	224412	Terrabacteria group	Firmicutes	2.81522	32.7	-	JDJZ01	63	2935	2793	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383701	GCA_000560805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/805/GCA_000560805.1_Stap_aure_F52748_V1	-	F52748
Staphylococcus aureus M12703	1410782	PRJNA224413	224413	Terrabacteria group	Firmicutes	2.82933	32.8	-	JDKA01	63	2953	2801	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383702	GCA_000560825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/825/GCA_000560825.1_Stap_aure_M12703_V1	-	M12703
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.78395	52.3	-	LHKQ01	209	4933	4646	8/5/15	2/28/17	Contig	FDA	SAMN03894282	GCA_001244905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/905/GCA_001244905.1_Salmonella_enterica_CVM_N48695_v1.0	-	CVM N48695
Mycobacterium tuberculosis WX1	1160715	PRJNA88525	88525	Terrabacteria group	Actinobacteria	4.31015	65.5	-	AJGM01	183	4294	4029	1/7/14	3/9/17	Contig	Fudan University	SAMN02597359	GCA_000516455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/455/GCA_000516455.1_WX1	23801408	WX1
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.84388	50.4	-	LENS01	12	4934	4617	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262771	GCA_002244605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/605/GCA_002244605.1_ASM224460v1	-	92-1295
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.98752	39.8	-	CRYJ01	56	2210	1986	3/23/15	3/10/17	Contig	SC	SAMEA970295	GCA_001206375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/375/GCA_001206375.1_5242_8_7	-	BHN596
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.67919	66.1	-	FRPU01	99	6427	6234	12/9/16	3/21/17	Contig	DTU	SAMEA2357511	GCA_900146515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/515/GCA_900146515.1_317	-	-
Acinetobacter baumannii	470	PRJNA357204	357204	Proteobacteria	Gammaproteobacteria	3.80979	39	-	MSFY01	148	3679	3532	5/19/17	5/24/17	Contig	Radboudumc	SAMN06134759	GCA_002150405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/405/GCA_002150405.1_ASM215040v1	-	antalya35
Klebsiella pneumoniae	573	PRJNA375812	375812	Proteobacteria	Gammaproteobacteria	5.60941	57.2	-	NIAD01	344	5745	5441	8/24/17	8/27/17	Contig	University of Pittsburgh School of Medicine	SAMN06445940	GCA_002268855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/855/GCA_002268855.1_ASM226885v1	-	H4
Klebsiella pneumoniae	573	PRJNA375812	375812	Proteobacteria	Gammaproteobacteria	5.62085	57.1	-	NIAF01	355	5800	5487	8/24/17	8/27/17	Contig	University of Pittsburgh School of Medicine	SAMN06445938	GCA_002268865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/865/GCA_002268865.1_ASM226886v1	-	F8
Acinetobacter baumannii	470	PRJNA357205	357205	Proteobacteria	Gammaproteobacteria	4.05871	39.2	-	MSFZ01	371	4059	3838	5/19/17	5/24/17	Contig	Radboudumc	SAMN06134776	GCA_002150485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/485/GCA_002150485.1_ASM215048v1	-	kayseri102
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.83101	66.1	-	FRPY01	137	6567	6375	12/9/16	3/21/17	Contig	DTU	SAMEA2357519	GCA_900146525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/525/GCA_900146525.1_323	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09346	39.6	-	CROE01	55	2264	2067	3/23/15	3/11/17	Contig	SC	SAMEA1025525	GCA_001206435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/435/GCA_001206435.1_6755_5_18	-	SMRU1170
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.29128	50.8	-	LENH01	12	5498	5115	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262760	GCA_002244615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/615/GCA_002244615.1_ASM224461v1	-	25-420
Mycobacterium tuberculosis INS_XDR	1441927	PRJNA232703	232703	Terrabacteria group	Actinobacteria	4.39102	65.6	-	JANH01	20	4281	4110	1/28/14	3/8/17	Contig	Instituto Nacional de Salud	SAMN02641516	GCA_000524155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/155/GCA_000524155.1_reference_map	25081269	INS_XDR
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91426	51.9	-	LHKS01	88	5013	4765	8/5/15	2/28/17	Contig	FDA	SAMN03894284	GCA_001244925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/925/GCA_001244925.1_Salmonella_enterica_CVM_N48697_v1.0	-	CVM N48697
Staphylococcus aureus M12714	1410784	PRJNA224415	224415	Terrabacteria group	Firmicutes	2.84765	32.8	-	JDKB01	61	2986	2853	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383704	GCA_000560845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/845/GCA_000560845.1_Stap_aure_M12714_V1	-	M12714
Staphylococcus aureus M12717	1410785	PRJNA224416	224416	Terrabacteria group	Firmicutes	2.83517	32.8	-	JDKC01	75	2963	2822	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383705	GCA_000560865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/865/GCA_000560865.1_Stap_aure_M12717_V1	-	M12717
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.90714	51.9	-	LHKT01	175	5009	4751	8/5/15	2/28/17	Contig	FDA	SAMN03894285	GCA_001244935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/935/GCA_001244935.1_Salmonella_enterica_CVM_N48698_v1.0	-	CVM N48698
Mycobacterium tuberculosis INS_MDR	1441925	PRJNA232701	232701	Terrabacteria group	Actinobacteria	4.39114	65.6	-	JAQI01	22	4284	4110	1/28/14	3/8/17	Contig	Instituto Nacional de Salud	SAMN02641514	GCA_000524175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/524/175/GCA_000524175.1_reference_map	24578270	INS_MDR
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.83021	50.4	-	LENU01	12	4915	4607	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262773	GCA_002244655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/655/GCA_002244655.1_ASM224465v1	-	92-1449
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10662	39.7	-	CRQA01	54	2263	1979	3/23/15	3/11/17	Contig	SC	SAMEA1024703	GCA_001206835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/835/GCA_001206835.1_6775_2_18	-	SMRU858
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.78005	66.1	-	FRPZ01	110	6538	6320	12/9/16	3/21/17	Contig	DTU	SAMEA2357520	GCA_900146535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/535/GCA_900146535.1_324	-	-
Acinetobacter baumannii	470	PRJNA362751	362751	Proteobacteria	Gammaproteobacteria	3.92971	38.9	-	MTQH01	417	3891	3618	5/22/17	5/24/17	Contig	UR12SP37-EA7361	SAMN06246916	GCA_002154155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/155/GCA_002154155.1_ASM215415v1	-	AbS2 C1-D7-12
Klebsiella pneumoniae	573	PRJNA375812	375812	Proteobacteria	Gammaproteobacteria	5.48323	57.2	-	NIAG01	226	5636	5371	8/24/17	8/27/17	Contig	University of Pittsburgh School of Medicine	SAMN06445937	GCA_002268895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/895/GCA_002268895.1_ASM226889v1	-	F3
Klebsiella pneumoniae	573	PRJNA375812	375812	Proteobacteria	Gammaproteobacteria	5.61895	57.1	-	NIAQ01	260	5762	5480	8/24/17	8/27/17	Contig	University of Pittsburgh School of Medicine	SAMN06445927	GCA_002268915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/915/GCA_002268915.1_ASM226891v1	-	B9
Acinetobacter baumannii	470	PRJNA362752	362752	Proteobacteria	Gammaproteobacteria	3.89714	38.9	-	MTQI01	1194	3987	3391	5/22/17	5/24/17	Contig	UR12SP37-EA7361	SAMN06246968	GCA_002154215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/215/GCA_002154215.1_ASM215421v1	-	AbS1 C0-D6-12
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.88514	66	-	FRQA01	77	6629	6446	12/9/16	3/21/17	Contig	DTU	SAMEA2357521	GCA_900146545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/545/GCA_900146545.1_325	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.18644	39.5	-	CRIT01	76	2442	2202	3/23/15	3/4/17	Contig	SC	SAMEA1025320	GCA_001207295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/295/GCA_001207295.1_6753_1_18	-	SMRU1482
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.1004	50.5	-	LENW01	10	5245	4895	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262775	GCA_002244665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/665/GCA_002244665.1_ASM224466v1	-	125-1609
Mycobacterium tuberculosis INS_SEN	1441926	PRJNA232702	232702	Terrabacteria group	Actinobacteria	4.37929	65.6	-	JAQH01	18	4263	4096	1/28/14	3/8/17	Contig	Instituto Nacional de Salud	SAMN02641515	GCA_000526115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/526/115/GCA_000526115.1_reference_map	24578269	INS_SEN
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.27291	51.8	-	LHKU01	127	5448	5128	8/5/15	2/28/17	Contig	FDA	SAMN03894286	GCA_001245005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/005/GCA_001245005.1_Salmonella_enterica_CVM_N48699_v1.0	-	CVM N48699
Staphylococcus aureus H87658	1410786	PRJNA224417	224417	Terrabacteria group	Firmicutes	2.82292	32.8	-	JDKD01	45	2945	2808	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383706	GCA_000560885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/885/GCA_000560885.1_Stap_aure_H87658_V1	-	H87658
Staphylococcus aureus W42929	1410787	PRJNA224418	224418	Terrabacteria group	Firmicutes	2.89264	32.8	-	JDKE01	28	3049	2924	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383707	GCA_000560905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/905/GCA_000560905.1_Stap_aure_W42929_V1	-	W42929
Salmonella enterica subsp. enterica serovar Montevideo	115981	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.54458	52.3	-	LHKV01	49	4580	4358	8/5/15	2/28/17	Contig	FDA	SAMN03894287	GCA_001245015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/015/GCA_001245015.1_Salmonella_enterica_CVM_N48700_v1.0	-	CVM N48700
Mycobacterium tuberculosis 1034	1279039	PRJNA185382	185382	Terrabacteria group	Actinobacteria	4.29377	65.6	-	APHO01	339	4295	4025	2/11/14	3/8/17	Contig	Lanzhou University	SAMN02951936	GCA_000568275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/275/GCA_000568275.1_Mycobacterium_tuberculosis_HSZ10223	-	1034
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.84672	50.4	-	LENV01	5	4927	4605	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262774	GCA_002244695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/695/GCA_002244695.1_ASM224469v1	-	92-1476
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.15267	39.7	-	CMWD01	90	2305	2004	3/23/15	3/15/17	Contig	SC	SAMEA1022816	GCA_001207355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/355/GCA_001207355.1_5756_7_3	-	311
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.88614	66	-	FRQB01	78	6630	6446	12/9/16	3/21/17	Contig	DTU	SAMEA2357522	GCA_900146555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/555/GCA_900146555.1_326	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.07691	38.9	-	NCXU01	130	3963	3764	6/8/17	6/10/17	Contig	JCVI	SAMN06461853	GCA_002182345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/345/GCA_002182345.1_ASM218234v1	-	ABUH502
Klebsiella pneumoniae	573	PRJNA375812	375812	Proteobacteria	Gammaproteobacteria	5.51931	57.2	-	NIAB01	276	5693	5379	8/24/17	8/27/17	Contig	University of Pittsburgh School of Medicine	SAMN06445942	GCA_002268925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/925/GCA_002268925.1_ASM226892v1	-	I1
Klebsiella pneumoniae	573	PRJNA375812	375812	Proteobacteria	Gammaproteobacteria	5.73238	57	-	NIAL01	303	5833	5527	8/24/17	8/27/17	Contig	University of Pittsburgh School of Medicine	SAMN06445932	GCA_002268935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/935/GCA_002268935.1_ASM226893v1	-	D4
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.12139	39	-	NCXW01	83	4078	3918	6/8/17	6/10/17	Contig	JCVI	SAMN06461851	GCA_002182365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/365/GCA_002182365.1_ASM218236v1	-	ABUH508
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.88289	66	-	FRQC01	90	6640	6452	12/9/16	3/21/17	Contig	DTU	SAMEA2357523	GCA_900146565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/565/GCA_900146565.1_327	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.17291	39.5	-	CROI01	70	2401	2164	3/22/15	3/11/17	Contig	SC	SAMEA1025588	GCA_001207735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/735/GCA_001207735.1_6755_5_22	-	SMRU1174
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.07631	50.5	-	LENX01	14	5243	4902	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262776	GCA_002244705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/705/GCA_002244705.1_ASM224470v1	-	125-1642
Mycobacterium tuberculosis	1773	PRJNA241077	241077	Terrabacteria group	Actinobacteria	4.23013	65.5	-	JHUF01	136	4212	4004	4/17/14	3/8/17	Contig	LNCC	SAMN02713587	GCA_000633085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/085/GCA_000633085.1_Mycobacterium_tuberculosis_G-12-005_genome	24812221	G-12-005
Salmonella enterica subsp. enterica serovar Braenderup	149391	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.7032	52.3	-	LHKW01	157	4769	4531	8/5/15	2/28/17	Contig	FDA	SAMN03894288	GCA_001245025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/025/GCA_001245025.1_Salmonella_enterica_CVM_N48701_v1.0	-	CVM N48701
Staphylococcus aureus W42932	1410788	PRJNA224419	224419	Terrabacteria group	Firmicutes	2.87162	32.7	-	JDKF01	26	3011	2874	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383708	GCA_000560925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/925/GCA_000560925.1_Stap_aure_W42932_V1	-	W42932
Staphylococcus aureus H18808	1410789	PRJNA224420	224420	Terrabacteria group	Firmicutes	2.87953	32.8	-	JDKG01	72	3024	2876	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383709	GCA_000560945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/945/GCA_000560945.1_Stap_aure_H18808_V1	-	H18808
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.75204	52.1	-	LHKX01	116	4841	4608	8/5/15	2/28/17	Contig	FDA	SAMN03894291	GCA_001245035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/035/GCA_001245035.1_Salmonella_enterica_CVM_N48704_v1.0	-	CVM N48704
Mycobacterium tuberculosis TKK-01-0036	1324246	PRJNA198131	198131	Terrabacteria group	Actinobacteria	4.39859	65.6	-	JLYL01	2	4276	4118	4/29/14	3/8/17	Contig	Broad Institute	SAMN02053769	GCA_000657835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/835/GCA_000657835.1_Myco_tube_TKK-01-0036_V1	-	TKK-01-0036
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.0324	50.5	-	LENY01	106	5208	4843	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262777	GCA_002244735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/735/GCA_002244735.1_ASM224473v1	-	136-1723
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09523	39.5	-	CRIY01	59	2299	2088	3/23/15	3/11/17	Contig	SC	SAMEA1025679	GCA_001207825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/825/GCA_001207825.1_6753_1_4	-	SMRU1468
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.68372	66.2	-	FRQD01	124	6419	6177	12/9/16	3/21/17	Contig	DTU	SAMEA2357524	GCA_900146575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/575/GCA_900146575.1_328	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.951	39	-	NCXX01	92	3890	3712	6/8/17	6/10/17	Contig	JCVI	SAMN06461850	GCA_002182385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/385/GCA_002182385.1_ASM218238v1	-	ABUH511
Klebsiella pneumoniae	573	PRJNA375812	375812	Proteobacteria	Gammaproteobacteria	5.6373	57.1	-	NIAM01	594	5949	5425	8/24/17	8/27/17	Contig	University of Pittsburgh School of Medicine	SAMN06445931	GCA_002268945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/945/GCA_002268945.1_ASM226894v1	-	C5
Klebsiella pneumoniae	573	PRJNA375812	375812	Proteobacteria	Gammaproteobacteria	5.62042	57.1	-	NIAT01	287	5783	5469	8/25/17	8/28/17	Contig	University of Pittsburgh School of Medicine	SAMN06445924	GCA_002269795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/795/GCA_002269795.1_ASM226979v1	-	B5
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.88325	38.7	-	NCXY01	49	3805	3630	6/8/17	6/10/17	Contig	JCVI	SAMN06461847	GCA_002182405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/405/GCA_002182405.1_ASM218240v1	-	ABUH518
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.55619	66.4	-	FRQF01	67	6285	6105	12/9/16	3/21/17	Contig	DTU	SAMEA2357527	GCA_900146585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/585/GCA_900146585.1_330	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12733	39.5	-	CRJU01	51	2331	2096	3/22/15	3/11/17	Contig	SC	SAMEA1025262	GCA_001207865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/865/GCA_001207865.1_6753_2_9	-	SMRU1498
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.28213	50.4	-	LENZ01	7	5422	5079	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262778	GCA_002244745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/745/GCA_002244745.1_ASM224474v1	-	136-1758
Mycobacterium tuberculosis SK-B	1402478	PRJNA219836	219836	Terrabacteria group	Actinobacteria	4.36468	65.6	-	JLSR01	53	4279	4090	4/29/14	3/8/17	Contig	Broad Institute	SAMN02360625	GCA_000657855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/855/GCA_000657855.1_Myco_tube_SK-B_V1	-	SK-B
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.87399	52	-	LHKZ01	122	4952	4664	8/5/15	2/28/17	Contig	FDA	SAMN03894294	GCA_001245105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/105/GCA_001245105.1_Salmonella_enterica_CVM_N48707_v1.0	-	CVM N48707
Staphylococcus aureus H18813	1410790	PRJNA224421	224421	Terrabacteria group	Firmicutes	2.88479	32.8	-	JDKH01	60	3068	2887	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383710	GCA_000560965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/965/GCA_000560965.1_Stap_aure_H18813_V1	-	H18813
Staphylococcus aureus H18809	1410791	PRJNA224422	224422	Terrabacteria group	Firmicutes	2.88887	32.8	-	JDKI01	55	3074	2895	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383711	GCA_000560985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/560/985/GCA_000560985.1_Stap_aure_H18809_V1	-	H18809
Salmonella enterica subsp. enterica serovar Montevideo	115981	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.67909	52.2	-	LHKY01	133	4804	4543	8/5/15	2/28/17	Contig	FDA	SAMN03894293	GCA_001245115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/115/GCA_001245115.1_Salmonella_enterica_CVM_N48706_v1.0	-	CVM N48706
Mycobacterium tuberculosis UT0026	1408916	PRJNA223548	223548	Terrabacteria group	Actinobacteria	4.42595	65.6	-	JLPY01	86	4332	4116	4/29/14	3/9/17	Contig	Broad Institute	SAMN02380993	GCA_000657875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/875/GCA_000657875.1_Myco_tube_UT0026_V1	-	UT0026
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.10142	50.5	-	LEOA01	15	5190	4840	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262779	GCA_002244775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/775/GCA_002244775.1_ASM224477v1	-	136-1863
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.1703	39.6	-	CRRX01	73	2393	2146	3/23/15	3/11/17	Contig	SC	SAMEA1025671	GCA_001207925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/925/GCA_001207925.1_6805_2_12	-	SMRU1428
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.56381	66.4	-	FRQH01	73	6276	6102	12/9/16	3/21/17	Contig	DTU	SAMEA2357528	GCA_900146595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/595/GCA_900146595.1_332	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.00349	39	-	NCYC01	76	3903	3755	6/8/17	6/10/17	Contig	JCVI	SAMN06461841	GCA_002182425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/425/GCA_002182425.1_ASM218242v1	-	ABUH533
Klebsiella pneumoniae	573	PRJNA375812	375812	Proteobacteria	Gammaproteobacteria	5.71602	57	-	NIAP01	494	5838	5504	8/25/17	8/28/17	Contig	University of Pittsburgh School of Medicine	SAMN06445928	GCA_002269815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/815/GCA_002269815.1_ASM226981v1	-	C2
Klebsiella pneumoniae	573	PRJNA388519	388519	Proteobacteria	Gammaproteobacteria	5.54431	57.2	-	NIOA01	40	5550	5267	8/25/17	8/28/17	Contig	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN07178312	GCA_002269865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/865/GCA_002269865.1_ASM226986v1	-	K7118
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.84307	38.9	-	NCYE01	107	3755	3602	6/8/17	6/11/17	Contig	JCVI	SAMN06461838	GCA_002182445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/445/GCA_002182445.1_ASM218244v1	-	ABUH547
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.88509	66	-	FRQE01	77	6642	6450	12/9/16	3/21/17	Contig	DTU	SAMEA2357525	GCA_900146605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/605/GCA_900146605.1_329	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.15361	39.6	-	CQVQ01	67	2377	2131	3/23/15	3/11/17	Contig	SC	SAMEA1025159	GCA_001208485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/485/GCA_001208485.1_6710_8_12	-	SMRU1404
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.30334	50.7	-	LEOB01	12	5525	5167	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262780	GCA_002244785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/785/GCA_002244785.1_ASM224478v1	-	151-1921
Mycobacterium tuberculosis UT0046	1408927	PRJNA223559	223559	Terrabacteria group	Actinobacteria	4.40897	65.6	-	JLPO01	58	4290	4083	4/29/14	3/9/17	Contig	Broad Institute	SAMN02381004	GCA_000657895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/895/GCA_000657895.1_Myco_tube_UT0046_V1	-	UT0046
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.95133	52.1	-	LHLA01	114	5064	4805	8/5/15	2/28/17	Contig	FDA	SAMN03894295	GCA_001245125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/125/GCA_001245125.1_Salmonella_enterica_CVM_N48708_v1.0	-	CVM N48708
Staphylococcus aureus S72396	1410792	PRJNA224423	224423	Terrabacteria group	Firmicutes	2.86564	32.8	-	JDKJ01	63	3022	2856	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383712	GCA_000561005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/005/GCA_000561005.1_Stap_aure_S72396_V1	-	S72396
Staphylococcus aureus M16220	1410793	PRJNA224424	224424	Terrabacteria group	Firmicutes	2.78392	32.8	-	JDKK01	46	2887	2752	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383713	GCA_000561025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/025/GCA_000561025.1_Stap_aure_M16220_V1	-	M16220
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.09659	51.7	-	LHLB01	197	5201	4846	8/5/15	2/28/17	Contig	FDA	SAMN03894296	GCA_001245135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/135/GCA_001245135.1_Salmonella_enterica_CVM_N48710_v1.0	-	CVM N48710
Mycobacterium tuberculosis UT0075	1408943	PRJNA223575	223575	Terrabacteria group	Actinobacteria	4.41042	65.6	-	JLOY01	74	4321	4107	4/29/14	3/9/17	Contig	Broad Institute	SAMN02381020	GCA_000657915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/915/GCA_000657915.1_Myco_tube_UT0075_V1	-	UT0075
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.05356	50.6	-	LEOC01	4	5144	4900	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262781	GCA_002244815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/815/GCA_002244815.1_ASM224481v1	-	151-1941
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.17795	39.5	-	CQVR01	75	2427	2182	3/22/15	3/11/17	Contig	SC	SAMEA1025135	GCA_001208585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/585/GCA_001208585.1_6710_8_15	-	SMRU1407
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.5629	66.4	-	FRQG01	82	6285	6100	12/9/16	3/21/17	Contig	DTU	SAMEA2357529	GCA_900146615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/615/GCA_900146615.1_333	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.89745	38.8	-	NCYH01	38	3768	3599	6/8/17	6/11/17	Contig	JCVI	SAMN06461834	GCA_002182465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/465/GCA_002182465.1_ASM218246v1	-	ABUH557
Klebsiella pneumoniae	573	PRJNA375812	375812	Proteobacteria	Gammaproteobacteria	5.6069	57.1	-	NIAS01	312	5748	5451	8/25/17	8/28/17	Contig	University of Pittsburgh School of Medicine	SAMN06445925	GCA_002269895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/895/GCA_002269895.1_ASM226989v1	-	B6
Klebsiella pneumoniae	573	PRJNA375812	375812	Proteobacteria	Gammaproteobacteria	5.55413	57.1	-	NIAU01	329	5655	5296	8/25/17	8/28/17	Contig	University of Pittsburgh School of Medicine	SAMN06445923	GCA_002269905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/905/GCA_002269905.1_ASM226990v1	-	A5
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.91253	38.9	-	NCYI01	102	3811	3626	6/8/17	6/10/17	Contig	JCVI	SAMN06461833	GCA_002182485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/485/GCA_002182485.1_ASM218248v1	-	ABUH562
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.48904	66.5	-	FRQI01	87	6195	6011	12/9/16	3/21/17	Contig	DTU	SAMEA2357530	GCA_900146625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/625/GCA_900146625.1_334	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.13867	39.7	-	CRKD01	74	2377	2139	3/23/15	3/4/17	Contig	SC	SAMEA1025655	GCA_001208705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/705/GCA_001208705.1_6753_3_21	-	SMRU1533
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.72483	50.8	-	LEOD01	6	4763	4499	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262782	GCA_002244835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/835/GCA_002244835.1_ASM224483v1	-	157-1949
Mycobacterium tuberculosis KT-0018	1417011	PRJNA226761	226761	Terrabacteria group	Actinobacteria	4.38883	65.6	-	JLNQ01	72	4309	4109	4/29/14	3/8/17	Contig	Broad Institute	SAMN02398696	GCA_000657935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/935/GCA_000657935.1_Myco_tube_KT-_0018_V1	-	KT-0018
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.99351	51.9	-	LHLC01	193	5127	4780	8/5/15	2/28/17	Contig	FDA	SAMN03894297	GCA_001245195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/195/GCA_001245195.1_Salmonella_enterica_CVM_N48711_v1.0	-	CVM N48711
Staphylococcus aureus H18811	1410794	PRJNA224425	224425	Terrabacteria group	Firmicutes	2.88166	32.8	-	JDKL01	58	3028	2879	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383714	GCA_000561045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/045/GCA_000561045.1_Stap_aure_H18811_V1	-	H18811
Staphylococcus aureus H21935	1410795	PRJNA224426	224426	Terrabacteria group	Firmicutes	2.87295	32.8	-	JDKM01	2	3022	2869	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383715	GCA_000561065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/065/GCA_000561065.1_Stap_aure_H21935_V1	-	H21935
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.90441	52	-	LHLE01	215	5004	4666	8/5/15	2/28/17	Contig	FDA	SAMN03894299	GCA_001245205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/205/GCA_001245205.1_Salmonella_enterica_CVM_N50419_v1.0	-	CVM N50419
Mycobacterium tuberculosis KT-0037	1417019	PRJNA226769	226769	Terrabacteria group	Actinobacteria	4.36808	65.6	-	JLNI01	74	4290	4089	4/29/14	3/8/17	Contig	Broad Institute	SAMN02398704	GCA_000657955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/955/GCA_000657955.1_Myco_tube_KT-0037_V1	-	KT-0037
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.25604	50.6	-	LEOE01	26	5458	5132	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262783	GCA_002244845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/845/GCA_002244845.1_ASM224484v1	-	157-2180
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14034	39.6	-	CRQN01	70	2383	2156	3/22/15	3/10/17	Contig	SC	SAMEA1024845	GCA_001209225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/225/GCA_001209225.1_6775_2_9	-	SMRU849
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.54169	66.4	-	FRQJ01	74	6274	6087	12/9/16	3/21/17	Contig	DTU	SAMEA2357531	GCA_900146635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/635/GCA_900146635.1_335	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.92799	38.9	-	NCYK01	74	3838	3695	6/8/17	6/10/17	Contig	JCVI	SAMN06461823	GCA_002182505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/505/GCA_002182505.1_ASM218250v1	-	ABUH379
Klebsiella pneumoniae	573	PRJNA375812	375812	Proteobacteria	Gammaproteobacteria	5.55954	57.1	-	NIAV01	209	5667	5344	8/25/17	8/28/17	Contig	University of Pittsburgh School of Medicine	SAMN06445922	GCA_002269925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/925/GCA_002269925.1_ASM226992v1	-	A2
Klebsiella pneumoniae	573	PRJNA395086	395086	Proteobacteria	Gammaproteobacteria	5.62179	57.2	-	NQLL01	129	5703	5393	8/28/17	8/30/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07370821	GCA_002271285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/285/GCA_002271285.1_ASM227128v1	-	NU-CRE265
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.99991	39	-	NCYL01	70	3929	3780	6/8/17	6/10/17	Contig	JCVI	SAMN06461821	GCA_002182545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/545/GCA_002182545.1_ASM218254v1	-	ABUH383
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.55968	66.4	-	FRQK01	76	6280	6100	12/9/16	3/21/17	Contig	DTU	SAMEA2357532	GCA_900146645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/645/GCA_900146645.1_336	-	-
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.17606	39.5	-	CRPT01	53	2422	2178	3/22/15	3/11/17	Contig	SC	SAMEA1024706	GCA_001209865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/865/GCA_001209865.1_6775_1_7	-	SMRU823
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.96743	50.6	-	LEOF01	14	5059	4764	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262784	GCA_002244875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/875/GCA_002244875.1_ASM224487v1	-	176-2175
Mycobacterium tuberculosis KT-0040	1417020	PRJNA226770	226770	Terrabacteria group	Actinobacteria	4.38492	65.6	-	JLNH01	62	4304	4105	4/29/14	3/8/17	Contig	Broad Institute	SAMN02398705	GCA_000657975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/975/GCA_000657975.1_Myco_tube_KT-0040_V1	-	KT-0040
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.68497	52.2	-	LHLD01	186	4749	4481	8/5/15	2/28/17	Contig	FDA	SAMN03894298	GCA_001245215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/215/GCA_001245215.1_Salmonella_enterica_CVM_N48712_v1.0	-	CVM N48712
Staphylococcus aureus H21924	1410796	PRJNA224427	224427	Terrabacteria group	Firmicutes	2.90785	32.7	-	JDKN01	18	3070	2940	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383716	GCA_000561085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/085/GCA_000561085.1_Stap_aure_H21924_V1	-	H21924
Staphylococcus aureus F59156	1410797	PRJNA224428	224428	Terrabacteria group	Firmicutes	2.83072	32.7	-	JDKO01	26	2946	2815	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383717	GCA_000561105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/105/GCA_000561105.1_Stap_aure_F59156_V1	-	F59156
"Salmonella enterica subsp. enterica serovar 4,5,12:i-"	1697389	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.94259	52.2	-	LHLF01	71	5083	4861	8/5/15	3/22/17	Contig	FDA	SAMN03894300	GCA_001245255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/255/GCA_001245255.1_Salmonella_enterica_CVM_N50420_v1.0	-	CVM N50420
Mycobacterium tuberculosis KT-0067	1417026	PRJNA226776	226776	Terrabacteria group	Actinobacteria	4.38443	65.6	-	JLNE01	70	4318	4110	4/29/14	3/8/17	Contig	Broad Institute	SAMN02398711	GCA_000657995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/657/995/GCA_000657995.1_Myco_tube_KT-0067_V1	-	KT-0067
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.94409	50.5	-	LEOG01	13	5025	4726	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262785	GCA_002244885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/885/GCA_002244885.1_ASM224488v1	-	176-2312
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10588	39.5	-	CRWP01	51	2322	2101	3/22/15	3/4/17	Contig	SC	SAMEA1025374	GCA_001210165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/165/GCA_001210165.1_6807_1_9	-	SMRU1569
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.55455	66.4	-	FRQL01	69	6279	6102	12/9/16	3/21/17	Contig	DTU	SAMEA2357533	GCA_900146655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/655/GCA_900146655.1_337	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.80418	38.9	-	NCYN01	72	3680	3545	6/8/17	6/10/17	Contig	JCVI	SAMN06461819	GCA_002182605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/605/GCA_002182605.1_ASM218260v1	-	ABUH394
Klebsiella pneumoniae	573	PRJNA395086	395086	Proteobacteria	Gammaproteobacteria	5.80725	57	-	NQLM01	116	5911	5635	8/28/17	8/30/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07370820	GCA_002271295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/295/GCA_002271295.1_ASM227129v1	-	NU-CRE212
Klebsiella pneumoniae	573	PRJNA395086	395086	Proteobacteria	Gammaproteobacteria	5.62408	57.2	-	NQLO01	195	5801	5415	8/28/17	8/30/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07370818	GCA_002271335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/335/GCA_002271335.1_ASM227133v1	-	NU-CRE101
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.10401	39.1	-	NCYR01	78	4031	3880	6/8/17	6/10/17	Contig	JCVI	SAMN06461814	GCA_002182615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/615/GCA_002182615.1_ASM218261v1	-	ABUH413
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.67177	66.1	-	FRQM01	123	6411	6215	12/9/16	3/21/17	Contig	DTU	SAMEA2357534	GCA_900146665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/665/GCA_900146665.1_338	-	-
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.20834	39.6	-	CRLQ01	78	2456	2222	3/22/15	3/4/17	Contig	SC	SAMEA1025031	GCA_001210445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/445/GCA_001210445.1_6755_1_3	-	SMRU771
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.94088	50.5	-	LEOH01	9	5025	4727	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262786	GCA_002244915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/915/GCA_002244915.1_ASM224491v1	-	176-2352
Mycobacterium tuberculosis KT-0081	1417028	PRJNA226778	226778	Terrabacteria group	Actinobacteria	4.39167	65.6	-	JLNC01	79	4330	4120	4/29/14	3/8/17	Contig	Broad Institute	SAMN02398713	GCA_000658015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/015/GCA_000658015.1_Myco_tube_KT-0081_V1	-	KT-0081
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91296	52	-	LHLG01	201	5012	4680	8/5/15	2/28/17	Contig	FDA	SAMN03894301	GCA_001245295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/295/GCA_001245295.1_Salmonella_enterica_CVM_N50421_v1.0	-	CVM N50421
Staphylococcus aureus T62854	1410798	PRJNA224429	224429	Terrabacteria group	Firmicutes	2.79545	32.8	-	JDKP01	48	2931	2763	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383718	GCA_000561125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/125/GCA_000561125.1_Stap_aure_T62854_V1	-	T62854
Staphylococcus aureus W48906	1410799	PRJNA224430	224430	Terrabacteria group	Firmicutes	2.90226	32.7	-	JDKQ01	29	3067	2897	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383719	GCA_000561145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/145/GCA_000561145.1_Stap_aure_W48906_V1	-	W48906
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.93823	51.9	-	LHLI01	64	5021	4789	8/5/15	2/28/17	Contig	FDA	SAMN03894303	GCA_001245335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/335/GCA_001245335.1_Salmonella_enterica_CVM_N50423_v1.0	-	CVM N50423
Mycobacterium tuberculosis UT0049	1438890	PRJNA233321	233321	Terrabacteria group	Actinobacteria	4.39565	65.6	-	JLMY01	67	4315	4127	4/29/14	3/9/17	Contig	Broad Institute	SAMN02567661	GCA_000658035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/035/GCA_000658035.1_Myco_tube_UT0049_V1	-	UT0049
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.15677	50.5	-	LEOI01	7	5285	4945	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262787	GCA_002244925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/925/GCA_002244925.1_ASM224492v1	-	30-398
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07278	39.7	-	CRXP01	128	2295	2048	3/23/15	3/11/17	Contig	SC	SAMEA1025335	GCA_001211125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/125/GCA_001211125.1_6807_2_8	-	SMRU1592
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.87378	66.1	-	FRQN01	102	6671	6463	12/9/16	3/21/17	Contig	DTU	SAMEA2357535	GCA_900146675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/675/GCA_900146675.1_339	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.03159	39	-	NCYQ01	134	3997	3795	6/8/17	6/10/17	Contig	JCVI	SAMN06461815	GCA_002182625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/625/GCA_002182625.1_ASM218262v1	-	ABUH407
Klebsiella pneumoniae	573	PRJNA395086	395086	Proteobacteria	Gammaproteobacteria	5.72617	57.1	-	NQLN01	126	5846	5555	8/28/17	8/30/17	Contig	Northwestern University Feinberg School of Medicine	SAMN07370819	GCA_002271345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/345/GCA_002271345.1_ASM227134v1	-	NU-CRE176
Klebsiella pneumoniae	573	PRJNA375812	375812	Proteobacteria	Gammaproteobacteria	5.75135	57	-	NIAK01	266	5834	5555	8/24/17	8/30/17	Contig	University of Pittsburgh School of Medicine	SAMN06445933	GCA_002271825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/271/825/GCA_002271825.1_ASM227182v1	-	D7
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.16451	39	-	NCYT01	80	4106	3958	6/8/17	6/10/17	Contig	JCVI	SAMN06461812	GCA_002182645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/645/GCA_002182645.1_ASM218264v1	-	ABUH424
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.33091	66.5	-	FRQO01	64	6021	5871	12/9/16	3/21/17	Contig	DTU	SAMEA2357537	GCA_900146685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/685/GCA_900146685.1_340	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.19656	39.7	-	CRWO01	64	2458	2236	3/23/15	3/11/17	Contig	SC	SAMEA1025283	GCA_001211445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/445/GCA_001211445.1_6807_1_4	-	SMRU1564
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.13202	50.5	-	LEOJ01	16	5268	4903	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262788	GCA_002244945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/945/GCA_002244945.1_ASM224494v1	-	34-481
Mycobacterium tuberculosis UT0043	1438840	PRJNA233336	233336	Terrabacteria group	Actinobacteria	4.39872	65.6	-	JLMS01	68	4308	4117	4/29/14	3/9/17	Contig	Broad Institute	SAMN02567676	GCA_000658055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/055/GCA_000658055.1_Myco_tube_UT0043_V1	-	UT0043
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.81762	52.3	-	LHLH01	73	4944	4713	8/5/15	2/28/17	Contig	FDA	SAMN03894302	GCA_001245345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/345/GCA_001245345.1_Salmonella_enterica_CVM_N50422_v1.0	-	CVM N50422
Staphylococcus aureus T62848	1410800	PRJNA224431	224431	Terrabacteria group	Firmicutes	2.81289	32.8	-	JDKR01	49	2937	2786	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383720	GCA_000561165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/165/GCA_000561165.1_Stap_aure_T62848_V1	-	T62848
Staphylococcus aureus H24884	1410801	PRJNA224432	224432	Terrabacteria group	Firmicutes	2.93108	32.6	-	JDKS01	30	3084	2943	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383721	GCA_000561185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/185/GCA_000561185.1_Stap_aure_H24884_V1	-	H24884
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.69602	52.1	-	LHLJ01	34	4804	4556	8/5/15	2/28/17	Contig	FDA	SAMN03894304	GCA_001245355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/355/GCA_001245355.1_Salmonella_enterica_CVM_N50424_v1.0	-	CVM N50424
Mycobacterium tuberculosis UT0047	1438884	PRJNA233337	233337	Terrabacteria group	Actinobacteria	4.40996	65.6	-	JLMR01	87	4352	4140	4/29/14	3/9/17	Contig	Broad Institute	SAMN02567677	GCA_000658075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/075/GCA_000658075.1_Myco_tube_UT0047_V1	-	UT0047
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.29578	50.6	-	LEOK01	18	5510	5169	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262789	GCA_002244965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/965/GCA_002244965.1_ASM224496v1	-	73-938
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.03973	39.7	-	CRXF01	58	2232	2018	3/23/15	3/11/17	Contig	SC	SAMEA1025344	GCA_001211845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/845/GCA_001211845.1_6807_2_23	-	SMRU1607
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	5.76251	65.8	-	FRQW01	1329	6197	5028	12/9/16	3/21/17	Contig	DTU	SAMEA2357538	GCA_900146695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/695/GCA_900146695.1_341	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.23807	38.9	-	NCYV01	202	4191	3954	6/8/17	6/10/17	Contig	JCVI	SAMN06461810	GCA_002182685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/685/GCA_002182685.1_ASM218268v1	-	ABUH428
Klebsiella pneumoniae	573	PRJNA343664	343664	Proteobacteria	Gammaproteobacteria	5.72285	56.7	-	MVPH01	157	5783	5485	8/31/17	9/2/17	Contig	Universidad El Bosque	SAMN05792035	GCA_002283495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/495/GCA_002283495.1_ASM228349v1	-	GMR-RA-453.16
Klebsiella pneumoniae	573	PRJNA401154	401154	Proteobacteria	Gammaproteobacteria	5.56824	57.2	-	NSLE01	92	5770	5393	9/6/17	9/18/17	Contig	University of Sao Paulo	SAMN07595147	GCA_002304205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/205/GCA_002304205.1_ASM230420v1	26458280	KPN535
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.04293	39	-	NCYW01	140	4012	3800	6/8/17	6/10/17	Contig	JCVI	SAMN06461809	GCA_002182695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/695/GCA_002182695.1_ASM218269v1	-	ABUH431
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.73978	66.1	-	FRQP01	96	6446	6251	12/9/16	3/21/17	Contig	DTU	SAMEA2357539	GCA_900146705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/705/GCA_900146705.1_342	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.11591	39.7	-	CRXB01	47	2272	1981	3/23/15	3/6/17	Contig	SC	SAMEA1025150	GCA_001212165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/165/GCA_001212165.1_6807_2_15	-	SMRU1599
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.20778	50.6	-	LEOL01	23	5327	4994	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262790	GCA_002244995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/244/995/GCA_002244995.1_ASM224499v1	-	107-1461
Mycobacterium tuberculosis XTB13-110	1427202	PRJNA229596	229596	Terrabacteria group	Actinobacteria	4.42127	65.6	-	JLLN01	32	4320	4107	4/29/14	3/9/17	Contig	Broad Institute	SAMN02419558	GCA_000658095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/095/GCA_000658095.1_Myco_tube_XTB13-110_V1	-	XTB13-110
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.04909	52.1	-	LHLK01	77	5201	4940	8/5/15	2/28/17	Contig	FDA	SAMN03894305	GCA_001245415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/415/GCA_001245415.1_Salmonella_enterica_CVM_N50425_v1.0	-	CVM N50425
Staphylococcus aureus F62007	1410802	PRJNA224433	224433	Terrabacteria group	Firmicutes	2.83462	32.8	-	JDKT01	56	2951	2810	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383722	GCA_000561205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/205/GCA_000561205.1_Stap_aure_F62007_V1	-	F62007
Staphylococcus aureus F62010	1410803	PRJNA224434	224434	Terrabacteria group	Firmicutes	2.78973	32.8	-	JDKU01	60	2910	2746	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383723	GCA_000561225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/225/GCA_000561225.1_Stap_aure_F62010_V1	-	F62010
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.74212	52.1	-	LHLM01	47	4832	4596	8/5/15	2/28/17	Contig	FDA	SAMN03894308	GCA_001245435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/435/GCA_001245435.1_Salmonella_enterica_CVM_N50428_v1.0	-	CVM N50428
Mycobacterium tuberculosis XTB13-123	1427214	PRJNA229608	229608	Terrabacteria group	Actinobacteria	4.41887	65.6	-	JLLB01	53	4345	4114	4/29/14	3/9/17	Contig	Broad Institute	SAMN02419570	GCA_000658115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/115/GCA_000658115.1_Myco_tube_XTB13-123_V1	-	XTB13-123
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.93945	50.6	-	LEOM01	16	5132	4836	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262791	GCA_002245005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/005/GCA_002245005.1_ASM224500v1	-	111-1495
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.16675	39.7	-	CTRR01	6	2364	2078	3/31/15	3/11/17	Contig	SC	SAMEA2167693	GCA_001234125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/125/GCA_001234125.1_PB_StrepPneum_A1	-	A1
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.74057	66.1	-	FRQQ01	108	6456	6249	12/9/16	3/21/17	Contig	DTU	SAMEA2357540	GCA_900146715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/715/GCA_900146715.1_343	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.03775	39	-	NCYZ01	127	4003	3796	6/8/17	6/10/17	Contig	JCVI	SAMN06461806	GCA_002182705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/705/GCA_002182705.1_ASM218270v1	-	ABUH442
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.36444	57.3	-	NQDF01	78	5422	5172	9/20/17	9/22/17	Contig	JCVI	SAMN07450646	GCA_002317885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/885/GCA_002317885.1_ASM231788v1	-	KPLC+01
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.04067	39	-	NCZA01	136	4006	3795	6/8/17	6/10/17	Contig	JCVI	SAMN06461805	GCA_002182725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/725/GCA_002182725.1_ASM218272v1	-	ABUH446
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.68221	66.1	-	FRQR01	93	6363	6183	12/9/16	3/21/17	Contig	DTU	SAMEA2357541	GCA_900146725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/725/GCA_900146725.1_344	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.0761	39.7	-	CRXK01	76	2302	2089	3/23/15	3/11/17	Contig	SC	SAMEA1025273	GCA_001262235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/235/GCA_001262235.1_6807_2_6	-	SMRU1590
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.1154	50.6	-	LEON01	16	5259	4902	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262792	GCA_002245015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/015/GCA_002245015.1_ASM224501v1	-	210-2673
Mycobacterium tuberculosis XTB13-142	1427231	PRJNA229626	229626	Terrabacteria group	Actinobacteria	4.41762	65.6	-	JLKL01	2	4299	4107	4/29/14	3/9/17	Contig	Broad Institute	SAMN02419587	GCA_000658135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/135/GCA_000658135.1_Myco_tube_XTB13-142_V1	-	XTB13-142
Salmonella enterica subsp. enterica serovar Braenderup	149391	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.70734	52.2	-	LHLL01	38	4783	4556	8/5/15	2/28/17	Contig	FDA	SAMN03894307	GCA_001245445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/445/GCA_001245445.1_Salmonella_enterica_CVM_N50427_v1.0	-	CVM N50427
Staphylococcus aureus M20894	1410805	PRJNA224436	224436	Terrabacteria group	Firmicutes	2.77645	32.8	-	JDKV01	50	2894	2758	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383725	GCA_000561245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/245/GCA_000561245.1_Stap_aure_M20894_V1	-	M20894
Staphylococcus aureus M20913	1410806	PRJNA224437	224437	Terrabacteria group	Firmicutes	2.8323	32.8	-	JDKW01	51	2979	2827	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383726	GCA_000561265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/265/GCA_000561265.1_Stap_aure_M20913_V1	-	M20913
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.99132	51.9	-	LHLN01	104	5094	4776	8/5/15	2/28/17	Contig	FDA	SAMN03894309	GCA_001245465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/465/GCA_001245465.1_Salmonella_enterica_CVM_N50429_v1.0	-	CVM N50429
Mycobacterium tuberculosis XTB13-173	1427253	PRJNA229649	229649	Terrabacteria group	Actinobacteria	4.42759	65.6	-	JLJQ01	62	4349	4114	4/29/14	3/9/17	Contig	Broad Institute	SAMN02419609	GCA_000658155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/155/GCA_000658155.1_Myco_tube_XTB13-173_V1	-	XTB13-173
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.4314	50.5	-	LEOO01	13	5645	5214	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262793	GCA_002245055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/055/GCA_002245055.1_ASM224505v1	-	224-2931
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11078	39.6	-	CRVR01	52	2289	2073	3/23/15	3/5/17	Contig	SC	SAMEA1025835	GCA_001262295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/295/GCA_001262295.1_6805_7_16	-	SMRU1745
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.67857	66.1	-	FRQS01	84	6362	6181	12/9/16	3/21/17	Contig	DTU	SAMEA2357542	GCA_900146735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/735/GCA_900146735.1_345	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.15503	39	-	NCZB01	86	4096	3944	6/8/17	6/10/17	Contig	JCVI	SAMN06461804	GCA_002182765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/765/GCA_002182765.1_ASM218276v1	-	ABUH449
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.00957	39	-	NCZD01	132	3988	3768	6/8/17	6/10/17	Contig	JCVI	SAMN06461802	GCA_002182785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/785/GCA_002182785.1_ASM218278v1	-	ABUH457
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.74202	66	-	FRQT01	95	6453	6256	12/9/16	3/21/17	Contig	DTU	SAMEA2357543	GCA_900146745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/745/GCA_900146745.1_346	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07635	39.7	-	CRWM01	53	2296	2085	3/22/15	3/5/17	Contig	SC	SAMEA1025520	GCA_001262335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/335/GCA_001262335.1_6807_1_3	-	SMRU1563
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.17366	50.5	-	LEOP01	24	5363	4994	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262794	GCA_002245075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/075/GCA_002245075.1_ASM224507v1	-	225-2935
Mycobacterium tuberculosis MD18320	1447435	PRJNA234547	234547	Terrabacteria group	Actinobacteria	4.41606	65.6	-	JLGS01	85	4342	4131	4/29/14	3/8/17	Contig	Broad Institute	SAMN02584586	GCA_000658175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/175/GCA_000658175.1_Myco_tube_MD18320_V1	-	MD18320
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.89454	52.1	-	LHLO01	78	5008	4769	8/5/15	2/28/17	Contig	FDA	SAMN03894310	GCA_001245495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/495/GCA_001245495.1_Salmonella_enterica_CVM_N50430_v1.0	-	CVM N50430
Staphylococcus aureus M20916	1410807	PRJNA224438	224438	Terrabacteria group	Firmicutes	2.86956	32.8	-	JDKX01	64	3005	2853	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383727	GCA_000561285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/285/GCA_000561285.1_Stap_aure_M20916_V1	-	M20916
Staphylococcus aureus W51776	1410808	PRJNA224439	224439	Terrabacteria group	Firmicutes	2.85246	32.7	-	JDKY01	21	2987	2861	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383728	GCA_000561305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/305/GCA_000561305.1_Stap_aure_W51776_V1	-	W51776
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.0501	52.1	-	LHLP01	103	5223	4954	8/5/15	2/28/17	Contig	FDA	SAMN03894313	GCA_001245535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/535/GCA_001245535.1_Salmonella_enterica_CVM_N50433_v1.0	-	CVM N50433
Mycobacterium tuberculosis MD18486	1447436	PRJNA234548	234548	Terrabacteria group	Actinobacteria	4.41656	65.6	-	JLGR01	73	4351	4144	4/29/14	3/8/17	Contig	Broad Institute	SAMN02584587	GCA_000658195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/195/GCA_000658195.1_Myco_tube_MD18486_V1	-	MD18486
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.6321	50.5	-	LEOQ01	4	4700	4438	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262795	GCA_002245085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/085/GCA_002245085.1_ASM224508v1	-	236-3023
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00588	39.7	-	CFRA02	116	2179	1984	3/15/15	3/5/17	Contig	SC	SAMEA1032411	GCA_001299655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/655/GCA_001299655.2_7001_1_3	-	R34-3080
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.73574	66	-	FRQU01	80	6437	6252	12/9/16	3/21/17	Contig	DTU	SAMEA2357544	GCA_900146755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/755/GCA_900146755.1_347	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.03378	39	-	NCZE01	126	3999	3790	6/8/17	6/10/17	Contig	JCVI	SAMN06461801	GCA_002182795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/795/GCA_002182795.1_ASM218279v1	-	ABUH458
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.01194	39	-	NCZG01	119	3983	3780	6/8/17	6/10/17	Contig	JCVI	SAMN06461799	GCA_002182805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/805/GCA_002182805.1_ASM218280v1	-	ABUH473
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.73772	66.1	-	FRQV01	89	6438	6247	12/9/16	3/21/17	Contig	DTU	SAMEA2357545	GCA_900146765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/765/GCA_900146765.1_348	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08863	39.6	-	CFQS02	201	2270	2044	3/15/15	3/11/17	Contig	SC	SAMEA1032416	GCA_001299675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/675/GCA_001299675.2_6952_4_8	-	439699
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.28669	50.6	-	LEOR01	20	5491	5104	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262796	GCA_002245095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/095/GCA_002245095.1_ASM224509v1	-	251-3129
Mycobacterium tuberculosis MD20344	1447448	PRJNA234561	234561	Terrabacteria group	Actinobacteria	4.40178	65.5	-	JLGF01	119	4364	4138	4/29/14	3/8/17	Contig	Broad Institute	SAMN02584599	GCA_000658215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/215/GCA_000658215.1_Myco_tube_MD20344_V1	-	MD20344
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.90431	52.1	-	LHLQ01	81	5039	4741	8/5/15	2/28/17	Contig	FDA	SAMN03894314	GCA_001245545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/545/GCA_001245545.1_Salmonella_enterica_CVM_N50434_v1.0	-	CVM N50434
Staphylococcus aureus H27739	1410809	PRJNA224440	224440	Terrabacteria group	Firmicutes	2.84524	32.8	-	JDKZ01	74	2988	2806	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383729	GCA_000561325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/325/GCA_000561325.1_Stap_aure_H27739_V1	-	H27739
Staphylococcus aureus H27761	1410810	PRJNA224441	224441	Terrabacteria group	Firmicutes	2.90974	32.7	-	JDLA01	44	3091	2913	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383730	GCA_000561345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/345/GCA_000561345.1_Stap_aure_H27761_V1	-	H27761
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.75874	52	-	LHLS01	55	4838	4608	8/5/15	2/28/17	Contig	FDA	SAMN03894316	GCA_001245555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/555/GCA_001245555.1_Salmonella_enterica_CVM_N50436_v1.0	-	CVM N50436
Mycobacterium tuberculosis MD16764	1447456	PRJNA234569	234569	Terrabacteria group	Actinobacteria	4.38522	65.6	-	JLFX01	96	4325	4113	4/29/14	3/8/17	Contig	Broad Institute	SAMN02584607	GCA_000658235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/235/GCA_000658235.1_Myco_tube_MD16764_V1	-	MD16764
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.29474	50.8	-	LENG01	11	5532	5143	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262759	GCA_002245165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/165/GCA_002245165.1_ASM224516v1	-	25-367
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05555	39.6	-	CVKI02	195	2215	1989	4/2/15	3/11/17	Contig	SC	SAMEA1032418	GCA_001299695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/695/GCA_001299695.2_7001_2_17	-	R34-3122
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.31177	66.5	-	FRQY01	61	5975	5835	12/9/16	3/21/17	Contig	DTU	SAMEA2357546	GCA_900146775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/775/GCA_900146775.1_349	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.01877	39	-	NCZI01	120	3983	3788	6/8/17	6/10/17	Contig	JCVI	SAMN06461797	GCA_002182845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/845/GCA_002182845.1_ASM218284v1	-	ABUH479
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.15492	38.9	-	NCZK01	81	4099	3940	6/8/17	6/10/17	Contig	JCVI	SAMN06461855	GCA_002182865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/865/GCA_002182865.1_ASM218286v1	-	ABUH496
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.2668	66.5	-	FRQX01	62	5907	5766	12/9/16	3/21/17	Contig	DTU	SAMEA2357548	GCA_900146785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/785/GCA_900146785.1_351	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04567	39.6	-	CFQF02	139	2208	2001	3/15/15	3/11/17	Contig	SC	SAMEA1032423	GCA_001299715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/715/GCA_001299715.2_6999_2_3	-	R34-3209
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.1694	50.5	-	LEMZ01	11	5334	4976	8/7/17	8/12/17	Scaffold	Broad Institute	SAMN03262752	GCA_002245175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/245/175/GCA_002245175.1_ASM224517v1	-	272-3565
Mycobacterium tuberculosis MD17749	1447477	PRJNA234590	234590	Terrabacteria group	Actinobacteria	4.38598	65.6	-	JLFC01	96	4333	4111	4/29/14	3/8/17	Contig	Broad Institute	SAMN02584628	GCA_000658255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/255/GCA_000658255.1_Myco_tube_MD17749_V1	-	MD17749
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.81244	52	-	LHLR01	71	4877	4600	8/5/15	2/28/17	Contig	FDA	SAMN03894315	GCA_001245565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/565/GCA_001245565.1_Salmonella_enterica_CVM_N50435_v1.0	-	CVM N50435
Staphylococcus aureus H27777	1410811	PRJNA224442	224442	Terrabacteria group	Firmicutes	2.69849	32.7	-	JDLB01	36	2784	2630	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383731	GCA_000561365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/365/GCA_000561365.1_Stap_aure_H27777_V1	-	H27777
Staphylococcus aureus F65057	1410813	PRJNA224444	224444	Terrabacteria group	Firmicutes	2.838	32.8	-	JDLC01	61	2956	2817	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383733	GCA_000561385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/385/GCA_000561385.1_Stap_aure_F65057_V1	-	F65057
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.79649	52.1	-	LHLW01	56	4931	4685	8/5/15	2/28/17	Contig	FDA	SAMN03894321	GCA_001245635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/635/GCA_001245635.1_Salmonella_enterica_CVM_N50441_v1.0	-	CVM N50441
Mycobacterium tuberculosis MD16765	1447478	PRJNA234591	234591	Terrabacteria group	Actinobacteria	4.39879	65.6	-	JLFB01	66	4319	4116	4/29/14	3/8/17	Contig	Broad Institute	SAMN02584629	GCA_000658275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/275/GCA_000658275.1_Myco_tube_MD16765_V1	-	MD16765
Escherichia coli O157:H7	83334	PRJNA395316	395316	Proteobacteria	Gammaproteobacteria	5.65299	50.3	-	NOKN01	4	6084	5516	8/18/17	8/21/17	Scaffold	U.S. Department of Agriculture 	SAMN07369154	GCA_002259555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/555/GCA_002259555.1_ASM225955v1	-	B6-914ARS
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04306	39.6	-	CFRD02	128	2205	1997	3/15/15	3/15/17	Contig	SC	SAMEA1032442	GCA_001299735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/735/GCA_001299735.2_7001_2_18	-	R34-3123
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.28805	66.4	-	FRRA01	96	5929	5785	12/9/16	3/21/17	Contig	DTU	SAMEA2357549	GCA_900146795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/795/GCA_900146795.1_352	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.05208	38.9	-	NCZN01	72	3979	3837	6/8/17	6/10/17	Contig	JCVI	SAMN06461794	GCA_002182875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/875/GCA_002182875.1_ASM218287v1	-	ABUH353
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.9666	39.1	-	NCZO01	73	3872	3725	6/8/17	6/10/17	Contig	JCVI	SAMN06461888	GCA_002182895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/895/GCA_002182895.1_ASM218289v1	-	ABUH356
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.2665	66.5	-	FRQZ01	65	5907	5768	12/9/16	3/21/17	Contig	DTU	SAMEA2357550	GCA_900146805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/805/GCA_900146805.1_353	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06746	39.5	-	CHIP02	177	2217	2029	4/21/15	3/5/17	Contig	SC	SAMEA1032445	GCA_001299755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/755/GCA_001299755.2_6999_5_21	-	217475
Escherichia coli	562	PRJNA397500	397500	Proteobacteria	Gammaproteobacteria	5.07605	50.7	-	NSBV01	129	5214	4879	9/11/17	9/13/17	Scaffold	Aligarh MUslim University	SAMN07459800	GCA_002289425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/425/GCA_002289425.1_ASM228942v1	-	AK1
Mycobacterium tuberculosis 02_1987	515616	PRJNA238921	238921	Terrabacteria group	Actinobacteria	4.37402	65.6	-	JLCZ01	60	4299	4100	4/29/14	3/8/17	Contig	Broad Institute	SAMN02400330	GCA_000658295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/295/GCA_000658295.1_Myco_tube_02_1987_V1	-	02_1987
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.01239	52.1	-	LHLU01	70	5137	4888	8/5/15	2/28/17	Contig	FDA	SAMN03894318	GCA_001245645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/645/GCA_001245645.1_Salmonella_enterica_CVM_N50438_v1.0	-	CVM N50438
Staphylococcus aureus M24400	1410814	PRJNA224445	224445	Terrabacteria group	Firmicutes	2.8718	32.7	-	JDLD01	19	3006	2880	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383734	GCA_000561405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/405/GCA_000561405.1_Stap_aure_M24400_V1	-	M24400
Staphylococcus aureus M24390	1410815	PRJNA224446	224446	Terrabacteria group	Firmicutes	2.84972	32.8	-	JDLE01	72	2987	2831	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383735	GCA_000561425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/425/GCA_000561425.1_Stap_aure_M24390_V1	-	M24390
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.76947	52.1	-	LHLV01	179	4879	4617	8/5/15	2/28/17	Contig	FDA	SAMN03894320	GCA_001245655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/655/GCA_001245655.1_Salmonella_enterica_CVM_N50440_v1.0	-	CVM N50440
Mycobacterium tuberculosis TB_RSA54	1421970	PRJNA228048	228048	Terrabacteria group	Actinobacteria	4.39478	65.6	-	JKVL01	69	4311	4130	4/29/14	3/8/17	Contig	Broad Institute	SAMN02403495	GCA_000658315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/315/GCA_000658315.1_Myco_tube_TB_RSA54_V1	-	TB_RSA54
Escherichia coli	562	PRJEB9970	325769	Proteobacteria	Gammaproteobacteria	5.20155	50.4	-	CXWG01	2	5358	5049	6/15/16	2/25/17	Scaffold	INSTITUT PASTEUR	SAMEA3496963	GCA_900007315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/315/GCA_900007315.1_VAP_LM33	-	LM33
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12314	39.6	-	CHBM02	160	2344	2134	4/21/15	3/5/17	Contig	SC	SAMEA1032453	GCA_001299775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/775/GCA_001299775.2_6999_7_10	-	365502
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.26867	66.5	-	FRRB01	65	5912	5766	12/9/16	3/21/17	Contig	DTU	SAMEA2357551	GCA_900146815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/815/GCA_900146815.1_354	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.03298	39	-	NCZP01	138	3995	3797	6/8/17	6/10/17	Contig	JCVI	SAMN06461887	GCA_002182925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/925/GCA_002182925.1_ASM218292v1	-	ABUH358
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.94204	38.9	-	NCZR01	139	3861	3665	6/8/17	6/10/17	Contig	JCVI	SAMN06461885	GCA_002182945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/945/GCA_002182945.1_ASM218294v1	-	ABUH363
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.29748	66.5	-	FRRC01	75	5932	5783	12/9/16	3/21/17	Contig	DTU	SAMEA2357552	GCA_900146825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/825/GCA_900146825.1_355	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05659	39.7	-	CFRK02	305	2190	2024	3/15/15	3/11/17	Contig	SC	SAMEA1032469	GCA_001299795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/795/GCA_001299795.2_7001_3_8	-	R34-3142
Escherichia coli 1827-70	670888	PRJNA40257	40257	Proteobacteria	Gammaproteobacteria	4.80309	50.8	-	ADUK01	35	4938	4210	10/25/10	8/8/17	Contig	Institute for Genome Sciences	SAMN00792432	GCA_000165655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/165/655/GCA_000165655.2_ASM16565v1	-	1827-70
Mycobacterium tuberculosis M1029	1448630	PRJNA235641	235641	Terrabacteria group	Actinobacteria	4.41433	65.6	-	JKPK01	79	4327	4111	4/29/14	3/8/17	Contig	Broad Institute	SAMN02598976	GCA_000658335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/335/GCA_000658335.1_Myco_tube_M1029_V1	-	M1029
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91619	52	-	LHLT01	83	4987	4691	8/5/15	2/28/17	Contig	FDA	SAMN03894317	GCA_001245665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/665/GCA_001245665.1_Salmonella_enterica_CVM_N50437_v1.0	-	CVM N50437
Staphylococcus aureus M27449	1410816	PRJNA224447	224447	Terrabacteria group	Firmicutes	2.72484	32.7	-	JDLF01	37	2802	2674	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383736	GCA_000561445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/445/GCA_000561445.1_Stap_aure_M27449_V1	-	M27449
Staphylococcus aureus T71868	1410817	PRJNA224448	224448	Terrabacteria group	Firmicutes	2.90211	32.7	-	JDLG01	42	3065	2922	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383737	GCA_000561465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/465/GCA_000561465.1_Stap_aure_T71868_V1	-	T71868
"Salmonella enterica subsp. enterica serovar 4,5,12:i-"	1697389	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.86017	52.2	-	LHLX01	105	4994	4758	8/5/15	3/22/17	Contig	FDA	SAMN03894322	GCA_001245735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/735/GCA_001245735.1_Salmonella_enterica_CVM_N50442_v1.0	-	CVM N50442
Mycobacterium tuberculosis M1030	1448631	PRJNA235642	235642	Terrabacteria group	Actinobacteria	4.42279	65.6	-	JKPJ01	72	4322	4099	4/29/14	3/8/17	Contig	Broad Institute	SAMN02598977	GCA_000658355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/355/GCA_000658355.1_Myco_tube_M1030_V1	-	M1030
Escherichia coli TW10722	913090	PRJNA59745	59745	Proteobacteria	Gammaproteobacteria	5.68989	50.5	-	AELB01	405	6273	5587	11/15/10	5/18/17	Contig	Institute for Genome Sciences	SAMN02435971	GCA_000166555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/555/GCA_000166555.2_ASM16655v2	21078854	TW10722
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.03286	39.7	-	CFQR02	182	2179	1975	3/15/15	3/11/17	Contig	SC	SAMEA1032470	GCA_001299815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/815/GCA_001299815.2_6925_2_80	-	R34-3061
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	7.03201	65.8	-	FRRD01	162	6713	6485	12/9/16	3/21/17	Contig	DTU	SAMEA2357553	GCA_900146835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/835/GCA_900146835.1_356	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.80468	38.9	-	NCZS01	70	3680	3550	6/8/17	6/10/17	Contig	JCVI	SAMN06461884	GCA_002182955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/955/GCA_002182955.1_ASM218295v1	-	ABUH367
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.19195	39	-	NCZU01	76	4129	3977	6/8/17	6/10/17	Contig	JCVI	SAMN06461825	GCA_002182965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/965/GCA_002182965.1_ASM218296v1	-	ABUH374
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	7.0381	65.8	-	FRRE01	163	6712	6489	12/9/16	3/21/17	Contig	DTU	SAMEA2357554	GCA_900146845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/845/GCA_900146845.1_357	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06701	39.5	-	CHIO02	157	2237	2019	4/21/15	3/11/17	Contig	SC	SAMEA1032475	GCA_001299835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/835/GCA_001299835.2_6999_2_4	-	R34-3210
Escherichia coli TW10828	913089	PRJNA59747	59747	Proteobacteria	Gammaproteobacteria	5.28027	50.6	-	AELC01	227	5601	5104	11/15/10	5/18/17	Contig	Institute for Genome Sciences	SAMN02435898	GCA_000166575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/575/GCA_000166575.2_ASM16657v2	21078854	TW10828
Mycobacterium tuberculosis M1926	1448727	PRJNA235738	235738	Terrabacteria group	Actinobacteria	4.39299	65.6	-	JKLR01	79	4319	4122	4/29/14	3/8/17	Contig	Broad Institute	SAMN02599073	GCA_000658375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/375/GCA_000658375.1_Myco_tube_M1926_V1	-	M1926
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.96762	52.1	-	LHLY01	69	5147	4826	8/5/15	2/28/17	Contig	FDA	SAMN03894323	GCA_001245745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/745/GCA_001245745.1_Salmonella_enterica_CVM_N50443_v1.0	-	CVM N50443
Staphylococcus aureus T71872	1410818	PRJNA224449	224449	Terrabacteria group	Firmicutes	2.90171	32.7	-	JDLH01	38	3066	2921	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383738	GCA_000561485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/485/GCA_000561485.1_Stap_aure_T71872_V1	-	T71872
Staphylococcus aureus T71888	1410819	PRJNA224450	224450	Terrabacteria group	Firmicutes	2.85171	32.8	-	JDLI01	59	2983	2818	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383739	GCA_000561505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/505/GCA_000561505.1_Stap_aure_T71888_V1	-	T71888
Salmonella enterica subsp. enterica serovar Liverpool	216804	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.93221	51.9	-	LHLZ01	89	4973	4711	8/5/15	2/28/17	Contig	FDA	SAMN03894324	GCA_001245755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/755/GCA_001245755.1_Salmonella_enterica_CVM_N50444_v1.0	-	CVM N50444
Mycobacterium tuberculosis M2352	1448777	PRJNA235789	235789	Terrabacteria group	Actinobacteria	4.43198	65.6	-	JKJU01	86	4326	4111	4/29/14	3/8/17	Contig	Broad Institute	SAMN02599123	GCA_000658395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/395/GCA_000658395.1_Myco_tube_M2352_V1	-	M2352
Escherichia coli TW11681	913088	PRJNA59749	59749	Proteobacteria	Gammaproteobacteria	5.30584	50.7	-	AELD01	153	5662	5112	11/15/10	5/18/17	Contig	Institute for Genome Sciences	SAMN02436016	GCA_000166595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/595/GCA_000166595.2_ASM16659v2	21078854	TW11681
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04696	39.8	-	CFLM02	251	2264	2052	3/15/15	3/11/17	Contig	SC	SAMEA1032484	GCA_001299855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/855/GCA_001299855.2_7001_1_7	-	R34-3084
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.36632	66.4	-	FRRF01	58	6025	5882	12/9/16	3/21/17	Contig	DTU	SAMEA2357555	GCA_900146855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/855/GCA_900146855.1_358	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.78818	38.9	-	NCZW01	74	3638	3469	6/8/17	6/10/17	Contig	JCVI	SAMN06461875	GCA_002183005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/005/GCA_002183005.1_ASM218300v1	-	ABUH631
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.08682	38.9	-	NCZY01	93	4021	3855	6/8/17	6/10/17	Contig	JCVI	SAMN06461873	GCA_002183025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/025/GCA_002183025.1_ASM218302v1	-	ABUH634
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.36763	66.4	-	FRRH01	60	6034	5881	12/9/16	3/21/17	Contig	DTU	SAMEA2357556	GCA_900146865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/865/GCA_900146865.1_359	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.11485	39.6	-	CHIN02	226	2326	2079	4/21/15	3/5/17	Contig	SC	SAMEA1032489	GCA_001299875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/875/GCA_001299875.2_6925_2_88	-	R34-3070
Escherichia coli TW14425	913087	PRJNA59751	59751	Proteobacteria	Gammaproteobacteria	5.2107	50.6	-	AELE01	155	5649	5078	11/15/10	5/18/17	Contig	Institute for Genome Sciences	SAMN02435972	GCA_000166615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/166/615/GCA_000166615.2_ASM16661v2	21078854	TW14425
Mycobacterium tuberculosis BTB07-168	1423429	PRJNA229210	229210	Terrabacteria group	Actinobacteria	4.39554	65.6	-	JKHL01	63	4304	4112	4/29/14	3/8/17	Contig	Broad Institute	SAMN02414845	GCA_000658415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/415/GCA_000658415.1_Myco_tube_BTB07-168_V1	-	BTB07-168
"Salmonella enterica subsp. enterica serovar 4,5,12:i-"	1697389	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.947	52.2	-	LHMA01	81	5092	4858	8/5/15	3/22/17	Contig	FDA	SAMN03894325	GCA_001245765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/765/GCA_001245765.1_Salmonella_enterica_CVM_N50445_v1.0	-	CVM N50445
Staphylococcus aureus H33602	1410820	PRJNA224451	224451	Terrabacteria group	Firmicutes	2.91487	32.8	-	JDLJ01	25	3070	2937	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383740	GCA_000561525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/525/GCA_000561525.1_Stap_aure_H33602_V1	-	H33602
Staphylococcus aureus H33636	1410821	PRJNA224452	224452	Terrabacteria group	Firmicutes	2.89596	32.7	-	JDLK01	31	3034	2899	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383741	GCA_000561545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/545/GCA_000561545.1_Stap_aure_H33636_V1	-	H33636
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.97917	52.1	-	LHMB01	80	5166	4842	8/5/15	2/28/17	Contig	FDA	SAMN03894326	GCA_001245835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/835/GCA_001245835.1_Salmonella_enterica_CVM_N50446_v1.0	-	CVM N50446
Mycobacterium tuberculosis 2485AR	1438866	PRJNA233354	233354	Terrabacteria group	Actinobacteria	4.4622	65.7	-	JKBR01	115	4398	4147	4/29/14	3/8/17	Contig	Broad Institute	SAMN02567702	GCA_000658435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/435/GCA_000658435.1_Myco_tube_2485AR_V1	-	2485AR
Escherichia coli B7A	340184	PRJNA15572	15572	Proteobacteria	Gammaproteobacteria	5.30024	50.7	-	AAJT02	289	5689	5111	9/7/05	5/18/17	Contig	TIGR	SAMN02435852	GCA_000167815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/815/GCA_000167815.1_ASM16781v1	-	B7A
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07484	39.5	-	CHWV02	159	2247	2024	4/21/15	3/5/17	Contig	SC	SAMEA1032493	GCA_001299895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/895/GCA_001299895.2_7001_1_23	-	R34-3100
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.31974	66.5	-	FRRG01	63	5965	5824	12/9/16	3/21/17	Contig	DTU	SAMEA2357558	GCA_900146875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/875/GCA_900146875.1_360	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.00902	39	-	NDAB01	158	3988	3763	6/8/17	6/10/17	Contig	JCVI	SAMN06461870	GCA_002183035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/035/GCA_002183035.1_ASM218303v1	-	ABUH644
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.01243	38.9	-	NCZZ01	146	3961	3738	6/8/17	6/10/17	Contig	JCVI	SAMN06461872	GCA_002183045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/045/GCA_002183045.1_ASM218304v1	-	ABUH638
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.3148	66.5	-	FRRJ01	53	5948	5817	12/9/16	3/21/17	Contig	DTU	SAMEA2357559	GCA_900146885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/885/GCA_900146885.1_361	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05974	39.6	-	CIDX02	166	2224	2025	4/21/15	3/11/17	Contig	SC	SAMEA1032495	GCA_001299915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/915/GCA_001299915.2_6999_2_12	-	R34-3218
Escherichia coli F11	340197	PRJNA15576	15576	Proteobacteria	Gammaproteobacteria	5.21596	50.5	-	AAJU02	119	5411	4962	9/7/05	5/18/17	Contig	TIGR	SAMN02435853	GCA_000167835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/835/GCA_000167835.1_ASM16783v1	-	F11
Mycobacterium tuberculosis 2483AR	1438864	PRJNA233356	233356	Terrabacteria group	Actinobacteria	4.46614	65.6	-	JKBP01	101	4408	4197	4/29/14	3/8/17	Contig	Broad Institute	SAMN02567704	GCA_000658455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/455/GCA_000658455.1_Myco_tube_2483AR_V1	-	2483AR
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.79247	52	-	LHMD01	57	4878	4636	8/5/15	2/28/17	Contig	FDA	SAMN03894329	GCA_001245845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/845/GCA_001245845.1_Salmonella_enterica_CVM_N50449_v1.0	-	CVM N50449
Staphylococcus aureus H33594	1410822	PRJNA224453	224453	Terrabacteria group	Firmicutes	2.7826	32.7	-	JDLL01	49	2903	2767	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383742	GCA_000561565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/565/GCA_000561565.1_Stap_aure_H33594_V1	-	H33594
Staphylococcus aureus F70893	1410823	PRJNA224454	224454	Terrabacteria group	Firmicutes	2.81333	32.7	-	JDLM01	57	2923	2727	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383743	GCA_000561585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/585/GCA_000561585.1_Stap_aure_F70893_V1	-	F70893
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.73107	52.1	-	LHMC01	37	4847	4596	8/5/15	2/28/17	Contig	FDA	SAMN03894328	GCA_001245855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/855/GCA_001245855.1_Salmonella_enterica_CVM_N50448_v1.0	-	CVM N50448
Mycobacterium tuberculosis 2482AR	1438863	PRJNA233357	233357	Terrabacteria group	Actinobacteria	4.43902	65.6	-	JKBO01	91	4371	4168	4/29/14	3/8/17	Contig	Broad Institute	SAMN02567705	GCA_000658475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/475/GCA_000658475.1_Myco_tube_2482AR_V1	-	2482AR
Escherichia coli E22	340185	PRJNA15577	15577	Proteobacteria	Gammaproteobacteria	5.52824	50.6	-	AAJV02	127	5939	5444	9/7/05	5/18/17	Contig	TIGR	SAMN02435878	GCA_000167855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/855/GCA_000167855.1_ASM16785v1	-	E22
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05628	39.6	-	CFQP02	130	2233	2027	3/15/15	3/11/17	Contig	SC	SAMEA1032499	GCA_001299935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/935/GCA_001299935.2_6952_7_23	-	R34-3183
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.27693	66.5	-	FRRI01	52	5897	5768	12/9/16	3/21/17	Contig	DTU	SAMEA2357560	GCA_900146895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/895/GCA_900146895.1_362	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.88545	38.9	-	NDAC01	117	3796	3635	6/8/17	6/10/17	Contig	JCVI	SAMN06461869	GCA_002183085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/085/GCA_002183085.1_ASM218308v1	-	ABUH649
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.14416	38.9	-	NDAD01	144	4077	3859	6/8/17	6/10/17	Contig	JCVI	SAMN06461868	GCA_002183105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/105/GCA_002183105.1_ASM218310v1	-	ABUH650
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.29038	66.5	-	FRRK01	75	5904	5763	12/9/16	3/21/17	Contig	DTU	SAMEA2357561	GCA_900146905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/905/GCA_900146905.1_363	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0524	39.7	-	CHBK02	135	2232	2022	4/21/15	3/11/17	Contig	SC	SAMEA1032500	GCA_001299955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/955/GCA_001299955.2_6999_6_17	-	303656
Escherichia coli E110019	340186	PRJNA15578	15578	Proteobacteria	Gammaproteobacteria	5.37621	50.7	-	AAJW02	137	5811	5287	9/7/05	5/18/17	Contig	TIGR	SAMN02435896	GCA_000167875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/875/GCA_000167875.1_ASM16787v1	-	E110019
Mycobacterium tuberculosis 2101HD	1438853	PRJNA233363	233363	Terrabacteria group	Actinobacteria	4.21087	65.6	-	JKBI01	90	4185	3974	4/29/14	3/8/17	Contig	Broad Institute	SAMN02567711	GCA_000658495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/495/GCA_000658495.1_Myco_tube_2101HD_V1	-	2101HD
"Salmonella enterica subsp. enterica serovar 4,5,12:i-"	1697389	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.94447	52.2	-	LHMF01	112	5096	4852	8/5/15	3/22/17	Contig	FDA	SAMN03894331	GCA_001245865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/865/GCA_001245865.1_Salmonella_enterica_CVM_N51240_v1.0	-	CVM N51240
Staphylococcus aureus W60774	1410825	PRJNA224456	224456	Terrabacteria group	Firmicutes	2.94037	32.7	-	JDLN01	37	3103	2970	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383745	GCA_000561605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/605/GCA_000561605.1_Stap_aure_W60774_V1	-	W60774
Staphylococcus aureus W60784	1410826	PRJNA224457	224457	Terrabacteria group	Firmicutes	2.78213	32.8	-	JDLO01	40	2886	2761	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383746	GCA_000561625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/625/GCA_000561625.1_Stap_aure_W60784_V1	-	W60784
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.76648	52.1	-	LHMH01	42	4882	4634	8/5/15	2/28/17	Contig	FDA	SAMN03894333	GCA_001245945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/945/GCA_001245945.1_Salmonella_enterica_CVM_N51242_v1.0	-	CVM N51242
Mycobacterium tuberculosis 2196MM	1438856	PRJNA233370	233370	Terrabacteria group	Actinobacteria	4.40932	65.6	-	JKBC01	81	4334	4130	4/29/14	3/8/17	Contig	Broad Institute	SAMN02567718	GCA_000658515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/515/GCA_000658515.1_Myco_tube_2196MM_V1	-	2196MM
Escherichia coli B171	344601	PRJNA15630	15630	Proteobacteria	Gammaproteobacteria	5.65443	50.4559	plasmid pB171:NC_002142.1/AB024946.1; plasmid pB171_69:NZ_CP021211.1/CP021211.1; plasmid pB171_90:NZ_CP021212.1/CP021212.1	AAJX02	265	6288	5564	9/7/05	6/30/17	Contig	TIGR	SAMN02435887	GCA_000167895.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/895/GCA_000167895.3_ASM16789v3	-	B171
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.03463	39.7	-	CHBN02	173	2199	2001	4/21/15	3/11/17	Contig	SC	SAMEA1032501	GCA_001299975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/975/GCA_001299975.2_6999_7_22	-	404463
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.31505	66.5	-	FRRM01	74	5962	5811	12/9/16	3/21/17	Contig	DTU	SAMEA2357563	GCA_900146915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/915/GCA_900146915.1_365	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.73188	39	-	NDAG01	107	3598	3451	6/8/17	6/10/17	Contig	JCVI	SAMN06461864	GCA_002183115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/115/GCA_002183115.1_ASM218311v1	-	ABUH670
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.14258	38.9	-	NDAF01	146	4078	3858	6/8/17	6/10/17	Contig	JCVI	SAMN06461866	GCA_002183125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/125/GCA_002183125.1_ASM218312v1	-	ABUH658
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.36763	66.4	-	FRRL01	74	6041	5886	12/9/16	3/21/17	Contig	DTU	SAMEA2357565	GCA_900146925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/925/GCA_900146925.1_367	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05993	39.6	-	CIIL02	166	2221	2021	4/21/15	3/11/17	Contig	SC	SAMEA1032503	GCA_001299995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/299/995/GCA_001299995.2_7001_2_12	-	R34-3116
Escherichia coli 53638	344610	PRJNA15639	15639	Proteobacteria	Gammaproteobacteria	5.37179	50.988	plasmid p53638_226:NC_010719.1/CP001064.1; plasmid p53638_75:NC_010720.1/CP001065.1	AAKB02	4	5755	5183	9/8/05	2/22/17	Contig	TIGR	SAMN02435879	GCA_000167915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/167/915/GCA_000167915.2_ASM16791v2	-	53638
Mycobacterium tuberculosis D 4155	1438824	PRJNA233395	233395	Terrabacteria group	Actinobacteria	4.39293	65.6	-	JKAK01	45	4294	4097	4/29/14	3/8/17	Contig	Broad Institute	SAMN02567763	GCA_000658535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/535/GCA_000658535.1_Myco_bovi_D_4155_V1	-	D 4155
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.99334	51.9	-	LHMG01	122	5108	4784	8/5/15	2/28/17	Contig	FDA	SAMN03894332	GCA_001245955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/955/GCA_001245955.1_Salmonella_enterica_CVM_N51241_v1.0	-	CVM N51241
Staphylococcus aureus H30732	1410827	PRJNA224458	224458	Terrabacteria group	Firmicutes	2.79408	32.8	-	JDLP01	45	2899	2758	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383747	GCA_000561645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/645/GCA_000561645.1_Stap_aure_H30732_V1	-	H30732
Staphylococcus aureus W60801	1410828	PRJNA224459	224459	Terrabacteria group	Firmicutes	2.81951	32.7	-	JDLQ01	31	2932	2810	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383748	GCA_000561665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/665/GCA_000561665.1_Stap_aure_W60801_V1	-	W60801
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.05429	51.9	-	LHMI01	91	5168	4921	8/5/15	2/28/17	Contig	FDA	SAMN03894335	GCA_001245965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/965/GCA_001245965.1_Salmonella_enterica_CVM_N51244_v1.0	-	CVM N51244
Mycobacterium tuberculosis Kc 32216	1438825	PRJNA233396	233396	Terrabacteria group	Actinobacteria	4.38743	65.6	-	JKAJ01	64	4302	4087	4/29/14	3/8/17	Contig	Broad Institute	SAMN02567764	GCA_000658555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/555/GCA_000658555.1_Myco_bovi_Kc_32216_V1	-	Kc 32216
Escherichia coli 101-1	358709	PRJNA16193	16193	Proteobacteria	Gammaproteobacteria	4.97977	50.6	-	AAMK02	91	5331	4840	12/12/05	5/18/17	Contig	TIGR	SAMN02435838	GCA_000168095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/168/095/GCA_000168095.1_ASM16809v1	-	101-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12275	39.5	-	CFIP02	154	2313	2093	3/15/15	3/5/17	Contig	SC	SAMEA1032508	GCA_001300015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/015/GCA_001300015.2_7001_1_22	-	R34-3099
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.35877	66.4	-	FRRO01	80	6051	5884	12/9/16	3/21/17	Contig	DTU	SAMEA2357564	GCA_900146935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/935/GCA_900146935.1_366	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.85547	38.9	-	NDAH01	144	3767	3594	6/8/17	6/10/17	Contig	JCVI	SAMN06461863	GCA_002183165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/165/GCA_002183165.1_ASM218316v1	-	ABUH673
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.10513	39	-	NDAI01	90	4052	3886	6/8/17	6/10/17	Contig	JCVI	SAMN06461862	GCA_002183185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/185/GCA_002183185.1_ASM218318v1	-	ABUH678
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.3219	66.5	-	FRRN01	67	5955	5816	12/9/16	3/21/17	Contig	DTU	SAMEA2357562	GCA_900146945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/945/GCA_900146945.1_364	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05815	39.7	-	CHBQ02	269	2213	2028	4/21/15	3/5/17	Contig	SC	SAMEA1032509	GCA_001300035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/035/GCA_001300035.2_7001_1_8	-	R34-3085
Escherichia coli O157:H7 str. EC4196	444451	PRJNA27741	27741	Proteobacteria	Gammaproteobacteria	5.62061	50.6	-	ABHO01	186	6076	5536	11/8/07	5/18/17	Contig	J. Craig Venter Institute	SAMN02436280	GCA_000171915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/915/GCA_000171915.1_ASM17191v1	-	EC4196
Mycobacterium tuberculosis TKK_04_0062	1448467	PRJNA235472	235472	Terrabacteria group	Actinobacteria	4.39737	65.6	-	JJXY01	2	4274	4109	4/29/14	3/9/17	Contig	Broad Institute	SAMN02585962	GCA_000658575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/575/GCA_000658575.1_Myco_tube_TKK_04_0062_V1	-	TKK_04_0062
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.75123	52.2	-	LHMJ01	96	4836	4611	8/5/15	2/28/17	Contig	FDA	SAMN03894336	GCA_001246025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/025/GCA_001246025.1_Salmonella_enterica_CVM_N51245_v1.0	-	CVM N51245
Staphylococcus aureus F74139	1410829	PRJNA224460	224460	Terrabacteria group	Firmicutes	2.91042	32.7	-	JDLR01	25	3060	2933	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383749	GCA_000561685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/685/GCA_000561685.1_Stap_aure_F74139_V1	-	F74139
Staphylococcus aureus T78544	1410830	PRJNA224461	224461	Terrabacteria group	Firmicutes	2.89987	32.7	-	JDLS01	69	3045	2888	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383750	GCA_000561705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/705/GCA_000561705.1_Stap_aure_T78544_V1	-	T78544
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.75098	52.1	-	LHMK01	80	4853	4611	8/5/15	2/28/17	Contig	FDA	SAMN03894337	GCA_001246035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/035/GCA_001246035.1_Salmonella_enterica_CVM_N51246_v1.0	-	CVM N51246
Mycobacterium tuberculosis TKK_05MA_0009	1448490	PRJNA235495	235495	Terrabacteria group	Actinobacteria	4.40456	65.6	-	JJXD01	71	4322	4137	4/29/14	3/9/17	Contig	Broad Institute	SAMN02585985	GCA_000658595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/595/GCA_000658595.1_Myco_tube_TKK_05MA_0009_V1	-	TKK_05MA_0009
Escherichia coli O157:H7 str. EC4113	444452	PRJNA27743	27743	Proteobacteria	Gammaproteobacteria	5.65585	50.6	-	ABHP01	231	6173	5549	11/8/07	5/18/17	Contig	J. Craig Venter Institute	SAMN02436229	GCA_000171935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/935/GCA_000171935.1_ASM17193v1	-	EC4113
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.14155	39.7	-	CFQL02	166	2272	1989	3/15/15	3/11/17	Contig	SC	SAMEA1032520	GCA_001300055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/055/GCA_001300055.2_6925_1_51	-	R34-3032
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.31669	66.5	-	FRRP01	68	5965	5816	12/9/16	3/21/17	Contig	DTU	SAMEA2357566	GCA_900146955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/955/GCA_900146955.1_368	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.05483	38.9	-	NDAK01	99	3983	3829	6/8/17	6/10/17	Contig	JCVI	SAMN06461860	GCA_002183195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/195/GCA_002183195.1_ASM218319v1	-	ABUH688
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.10826	38.9	-	NDAL01	103	4049	3891	6/8/17	6/10/17	Contig	JCVI	SAMN06461859	GCA_002183215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/215/GCA_002183215.1_ASM218321v1	-	ABUH691
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.96601	66.1	-	FRRR01	106	6737	6564	12/9/16	3/21/17	Contig	DTU	SAMEA2357569	GCA_900146965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/965/GCA_900146965.1_370	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04458	39.6	-	CFQX02	142	2207	1995	3/15/15	3/11/17	Contig	SC	SAMEA1032523	GCA_001300075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/075/GCA_001300075.2_6925_1_65	-	R34-3047
Escherichia coli O157:H7 str. EC4076	444453	PRJNA27745	27745	Proteobacteria	Gammaproteobacteria	5.70564	50.6	-	ABHQ01	135	6175	5643	11/8/07	5/18/17	Contig	J. Craig Venter Institute	SAMN02436230	GCA_000171955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/955/GCA_000171955.1_ASM17195v1	-	EC4076
Mycobacterium tuberculosis TKK_05MA_0051	1448516	PRJNA235521	235521	Terrabacteria group	Actinobacteria	4.43862	65.6	-	JJWK01	62	4326	4128	4/29/14	3/9/17	Contig	Broad Institute	SAMN02586011	GCA_000658615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/615/GCA_000658615.1_Myco_tube_TKK_05MA_0051_V1	-	TKK_05MA_0051
Salmonella enterica subsp. enterica serovar Reading	165302	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.65914	52.2	-	LHML01	55	4750	4485	8/5/15	2/28/17	Contig	FDA	SAMN03894338	GCA_001246075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/075/GCA_001246075.1_Salmonella_enterica_CVM_N51247_v1.0	-	CVM N51247
Staphylococcus aureus F77005	1410831	PRJNA224462	224462	Terrabacteria group	Firmicutes	2.82066	32.8	-	JDLT01	63	2936	2795	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383751	GCA_000561725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/725/GCA_000561725.1_Stap_aure_F77005_V1	-	F77005
Staphylococcus aureus F77047	1410832	PRJNA224463	224463	Terrabacteria group	Firmicutes	2.79068	32.7	-	JDLU01	77	2889	2689	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383752	GCA_000561745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/745/GCA_000561745.1_Stap_aure_F77047_V1	-	F77047
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.71373	52.1	-	LHMM01	51	4774	4542	8/5/15	2/28/17	Contig	FDA	SAMN03894339	GCA_001246095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/095/GCA_001246095.1_Salmonella_enterica_CVM_N51248_v1.0	-	CVM N51248
Mycobacterium tuberculosis TKK_05SA_0011	1448527	PRJNA235532	235532	Terrabacteria group	Actinobacteria	4.42373	65.6	-	JJWB01	63	4333	4146	4/29/14	3/9/17	Contig	Broad Institute	SAMN02586022	GCA_000658635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/635/GCA_000658635.1_Myco_tube_TKK_05SA_0011_V1	-	TKK_05SA_0011
Escherichia coli O157:H7 str. EC4401	478004	PRJNA27749	27749	Proteobacteria	Gammaproteobacteria	5.73313	50.5	-	ABHR01	186	6262	5697	11/8/07	5/18/17	Contig	J. Craig Venter Institute	SAMN02436281	GCA_000171975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/975/GCA_000171975.1_ASM17197v1	-	EC4401
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0553	39.6	-	CFID02	204	2210	2008	3/15/15	3/11/17	Contig	SC	SAMEA1032528	GCA_001300095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/095/GCA_001300095.2_6952_7_22	-	R34-3182
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.31536	66.5	-	FRRQ01	54	5950	5818	12/9/16	3/21/17	Contig	DTU	SAMEA2357567	GCA_900146975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/975/GCA_900146975.1_369	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.10851	38.9	-	NDAM01	98	4045	3888	6/8/17	6/10/17	Contig	JCVI	SAMN06461858	GCA_002183245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/245/GCA_002183245.1_ASM218324v1	-	ABUH692
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.77328	39	-	NDAN01	110	3660	3512	6/8/17	6/10/17	Contig	JCVI	SAMN06461832	GCA_002183265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/265/GCA_002183265.1_ASM218326v1	-	ABUH572
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.95906	66.1	-	FRRT01	104	6732	6558	12/9/16	3/21/17	Contig	DTU	SAMEA2357570	GCA_900146985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/985/GCA_900146985.1_371	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.11032	39.6	-	CFJQ02	179	2290	2080	3/15/15	3/11/17	Contig	SC	SAMEA1032536	GCA_001300115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/115/GCA_001300115.2_6930_8_5	-	R34-3011
Escherichia coli O157:H7 str. EC4486	478005	PRJNA27751	27751	Proteobacteria	Gammaproteobacteria	5.93317	50.4	-	ABHS01	165	6492	5903	11/8/07	5/18/17	Contig	J. Craig Venter Institute	SAMN02436174	GCA_000171995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/995/GCA_000171995.1_ASM17199v1	-	EC4486
Mycobacterium tuberculosis TKK_05SA_0020	1448534	PRJNA235539	235539	Terrabacteria group	Actinobacteria	4.4063	65.6	-	JJVU01	73	4320	4119	4/29/14	3/9/17	Contig	Broad Institute	SAMN02586029	GCA_000658655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/655/GCA_000658655.1_Myco_tube_TKK_05SA_0020_V1	-	TKK_05SA_0020
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91354	52	-	LHMN01	63	4992	4692	8/5/15	2/28/17	Contig	FDA	SAMN03894340	GCA_001246115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/115/GCA_001246115.1_Salmonella_enterica_CVM_N51249_v1.0	-	CVM N51249
Staphylococcus aureus H30737	1410833	PRJNA224464	224464	Terrabacteria group	Firmicutes	2.83577	32.8	-	JDLV01	80	2967	2806	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383753	GCA_000561765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/765/GCA_000561765.1_Stap_aure_H30737_V1	-	H30737
Staphylococcus aureus F76996	1410834	PRJNA224465	224465	Terrabacteria group	Firmicutes	2.93972	32.8	-	JDLW01	40	3121	2958	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383754	GCA_000561785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/785/GCA_000561785.1_Stap_aure_F76996_V1	-	F76996
Salmonella enterica subsp. enterica serovar Muenster	82689	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.70722	52.2	-	LHMO01	52	4810	4563	8/5/15	2/28/17	Contig	FDA	SAMN03894341	GCA_001246125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/125/GCA_001246125.1_Salmonella_enterica_CVM_N51250_v1.0	-	CVM N51250
Mycobacterium tuberculosis TKK_05SA_0026	1448539	PRJNA235544	235544	Terrabacteria group	Actinobacteria	4.41969	65.6	-	JJVP01	69	4332	4149	4/29/14	3/9/17	Contig	Broad Institute	SAMN02586034	GCA_000658675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/675/GCA_000658675.1_Myco_tube_TKK_05SA_0026_V1	-	TKK_05SA_0026
Escherichia coli O157:H7 str. EC4501	478006	PRJNA27753	27753	Proteobacteria	Gammaproteobacteria	5.67718	50.6	-	ABHT01	250	6208	5644	11/8/07	5/18/17	Contig	J. Craig Venter Institute	SAMN02436282	GCA_000172015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/015/GCA_000172015.1_ASM17201v1	-	EC4501
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05995	39.7	-	CHWU02	166	2236	2034	4/21/15	3/11/17	Contig	SC	SAMEA1032538	GCA_001300135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/135/GCA_001300135.2_6999_2_1	-	R34-3207
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.68239	66.2	-	FRRS01	93	6434	6245	12/9/16	3/21/17	Contig	DTU	SAMEA2357571	GCA_900146995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/146/995/GCA_900146995.1_372	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.03195	38.9	-	NDAO01	78	3954	3807	6/8/17	6/10/17	Contig	JCVI	SAMN06461831	GCA_002183275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/275/GCA_002183275.1_ASM218327v1	-	ABUH575
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.84462	38.9	-	NDAP01	109	3760	3603	6/8/17	6/10/17	Contig	JCVI	SAMN06461830	GCA_002183285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/285/GCA_002183285.1_ASM218328v1	-	ABUH578
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.39061	66.1	-	FRRW01	73	6144	5968	12/9/16	3/21/17	Contig	DTU	SAMEA2357572	GCA_900147005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/005/GCA_900147005.1_373	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12248	39.6	-	CFLN02	324	2269	2092	3/15/15	3/5/17	Contig	SC	SAMEA1032543	GCA_001300155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/155/GCA_001300155.2_6952_4_10	-	446376
Escherichia coli O157:H7 str. EC869	478008	PRJNA27757	27757	Proteobacteria	Gammaproteobacteria	5.73107	50.5	-	ABHU01	147	6225	5674	11/8/07	5/18/17	Contig	J. Craig Venter Institute	SAMN02436283	GCA_000172035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/035/GCA_000172035.1_ASM17203v1	21421787	EC869
Mycobacterium tuberculosis TKK_04_0095	1448564	PRJNA235569	235569	Terrabacteria group	Actinobacteria	4.44426	65.6	-	JJUV01	61	4373	4150	4/29/14	3/9/17	Contig	Broad Institute	SAMN02586059	GCA_000658695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/695/GCA_000658695.1_Myco_tube_TKK_04_0095_V1	-	TKK_04_0095
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.9159	52.1	-	LHMP01	50	5088	4772	8/5/15	2/28/17	Contig	FDA	SAMN03894342	GCA_001246165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/165/GCA_001246165.1_Salmonella_enterica_CVM_N51251_v1.0	-	CVM N51251
Staphylococcus aureus F68118	1410835	PRJNA224466	224466	Terrabacteria group	Firmicutes	2.86108	32.8	-	JDLX01	75	3006	2846	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383755	GCA_000561805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/805/GCA_000561805.1_Stap_aure_F68118_V1	-	F68118
Staphylococcus aureus M36077	1410836	PRJNA224467	224467	Terrabacteria group	Firmicutes	2.8636	32.8	-	JDLY01	74	3012	2861	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383756	GCA_000561825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/825/GCA_000561825.1_Stap_aure_M36077_V1	-	M36077
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.80218	52	-	LHMQ01	66	4866	4592	8/5/15	2/28/17	Contig	FDA	SAMN03894343	GCA_001246195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/195/GCA_001246195.1_Salmonella_enterica_CVM_N51252_v1.0	-	CVM N51252
Mycobacterium tuberculosis TKK_04_0097	1448566	PRJNA235571	235571	Terrabacteria group	Actinobacteria	4.42591	65.6	-	JJUT01	70	4344	4124	4/29/14	3/9/17	Contig	Broad Institute	SAMN02586061	GCA_000658715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/715/GCA_000658715.1_Myco_tube_TKK_04_0097_V1	-	TKK_04_0097
Escherichia coli O157:H7 str. EC508	478007	PRJNA27755	27755	Proteobacteria	Gammaproteobacteria	5.65667	50.6	-	ABHW01	272	6095	5508	11/15/07	5/18/17	Contig	J. Craig Venter Institute	SAMN02436284	GCA_000172055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/055/GCA_000172055.1_ASM17205v1	-	EC508
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07123	39.6	-	CFLL02	125	2274	2057	3/15/15	3/5/17	Contig	SC	SAMEA1032545	GCA_001300175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/175/GCA_001300175.2_6999_6_3	-	239434
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.31339	66.5	-	FRRU01	71	5969	5815	12/9/16	3/21/17	Contig	DTU	SAMEA2357573	GCA_900147015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/015/GCA_900147015.1_374	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.07684	38.9	-	NDAQ01	80	4003	3854	6/8/17	6/10/17	Contig	JCVI	SAMN06461829	GCA_002183325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/325/GCA_002183325.1_ASM218332v1	-	ABUH580
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.8832	39	-	NDAS01	93	3775	3622	6/8/17	6/10/17	Contig	JCVI	SAMN06461827	GCA_002183345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/345/GCA_002183345.1_ASM218334v1	-	ABUH589
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.27779	66.5	-	FRRV01	53	5900	5760	12/9/16	3/21/17	Contig	DTU	SAMEA2357575	GCA_900147025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/025/GCA_900147025.1_377	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06199	39.5	-	CFJX02	182	2201	2010	3/15/15	3/11/17	Contig	SC	SAMEA1032549	GCA_001300195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/195/GCA_001300195.2_7001_3_6	-	R34-3140
Escherichia coli O157:H7 str. FRIK966	570506	PRJNA32275	32275	Proteobacteria	Gammaproteobacteria	5.37691	50.2	-	ACXN01	316	5847	5346	8/20/09	5/18/17	Contig	MBRI	SAMN02470826	GCA_000175735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/735/GCA_000175735.1_ASM17573v1	-	-
Mycobacterium tuberculosis TKK_04_0108	1448573	PRJNA235578	235578	Terrabacteria group	Actinobacteria	4.42139	65.6	-	JJUM01	61	4343	4123	4/29/14	3/9/17	Contig	Broad Institute	SAMN02586068	GCA_000658735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/735/GCA_000658735.1_Myco_tube_TKK_04_0108_V1	-	TKK_04_0108
Salmonella enterica subsp. enterica serovar Brandenburg	149387	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.73115	52.2	-	LHMR01	60	4844	4582	8/5/15	2/28/17	Contig	FDA	SAMN03894344	GCA_001246205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/205/GCA_001246205.1_Salmonella_enterica_CVM_N51253_v1.0	-	CVM N51253
Staphylococcus aureus H42737	1410837	PRJNA224468	224468	Terrabacteria group	Firmicutes	2.85717	32.7	-	JDLZ01	23	2990	2864	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383757	GCA_000561845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/845/GCA_000561845.1_Stap_aure_H42737_V1	-	H42737
Staphylococcus aureus H42759	1410838	PRJNA224469	224469	Terrabacteria group	Firmicutes	2.82221	32.7	-	JDMA01	27	2950	2818	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383758	GCA_000561865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/865/GCA_000561865.1_Stap_aure_H42759_V1	-	H42759
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.07429	52.1	-	LHMS01	83	5237	4983	8/5/15	2/28/17	Contig	FDA	SAMN03894345	GCA_001246225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/225/GCA_001246225.1_Salmonella_enterica_CVM_N51254_v1.0	-	CVM N51254
Mycobacterium tuberculosis TKK_04_0112	1448575	PRJNA235580	235580	Terrabacteria group	Actinobacteria	4.42547	65.6	-	JJUK01	56	4329	4120	4/29/14	3/9/17	Contig	Broad Institute	SAMN02586070	GCA_000658755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/755/GCA_000658755.1_Myco_tube_TKK_04_0112_V1	-	TKK_04_0112
Escherichia coli O157:H7 str. FRIK2000	637388	PRJNA36543	36543	Proteobacteria	Gammaproteobacteria	5.40869	50.2	-	ACXO01	247	5844	5406	8/20/09	5/18/17	Contig	Medical Biofilm Research Institute	SAMN02470827	GCA_000175755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/755/GCA_000175755.1_ASM17575v1	-	FRIK2000
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.14845	39.7	-	CFJY02	211	2275	2023	3/15/15	3/11/17	Contig	SC	SAMEA1032561	GCA_001300215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/215/GCA_001300215.2_7001_1_11	-	R34-3088
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.27806	66.5	-	FRRX01	78	5914	5760	12/9/16	3/21/17	Contig	DTU	SAMEA2357574	GCA_900147035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/035/GCA_900147035.1_375	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.02733	38.9	-	NDAU01	78	3959	3801	6/8/17	6/10/17	Contig	JCVI	SAMN06461792	GCA_002183355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/355/GCA_002183355.1_ASM218335v1	-	ABUH596
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.95041	39	-	NDAV01	77	3845	3710	6/8/17	6/10/17	Contig	JCVI	SAMN06461790	GCA_002183365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/365/GCA_002183365.1_ASM218336v1	-	ABUH604
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.27966	66.5	-	FRRY01	54	5908	5771	12/9/16	3/21/17	Contig	DTU	SAMEA2357576	GCA_900147045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/045/GCA_900147045.1_378	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0453	39.7	-	CIEE02	122	2228	2025	4/21/15	3/11/17	Contig	SC	SAMEA1032562	GCA_001300235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/235/GCA_001300235.2_6999_5_15	-	187406
Escherichia coli O157:H7 str. EC4009	702430	PRJNA42809	42809	Proteobacteria	Gammaproteobacteria	5.19489	50.2	-	ADMX01	277	5534	5067	5/10/10	5/18/17	Contig	National Bioforensic Analysis Center	SAMN02470601	GCA_000178315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/315/GCA_000178315.1_ASM17831v1	-	EC4009
Mycobacterium tuberculosis TKK_04_0118	1448580	PRJNA235585	235585	Terrabacteria group	Actinobacteria	4.42222	65.6	-	JJUG01	51	4325	4131	4/29/14	3/9/17	Contig	Broad Institute	SAMN02586075	GCA_000658775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/775/GCA_000658775.1_Myco_tube_TKK_04_0118_V1	-	TKK_04_0118
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91175	52	-	LHMU01	110	4979	4685	8/5/15	2/28/17	Contig	FDA	SAMN03894347	GCA_001246255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/255/GCA_001246255.1_Salmonella_enterica_CVM_N51256_v1.0	-	CVM N51256
Staphylococcus aureus F80349	1410839	PRJNA224470	224470	Terrabacteria group	Firmicutes	2.85307	32.8	-	JDMB01	81	3005	2845	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383759	GCA_000561885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/885/GCA_000561885.1_Stap_aure_F80349_V1	-	F80349
Staphylococcus aureus F80358	1410840	PRJNA224471	224471	Terrabacteria group	Firmicutes	2.83895	32.8	-	JDMC01	49	2994	2829	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383760	GCA_000561905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/905/GCA_000561905.1_Stap_aure_F80358_V1	-	F80358
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.97966	52.1	-	LHMT01	68	5114	4873	8/5/15	2/28/17	Contig	FDA	SAMN03894346	GCA_001246265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/265/GCA_001246265.1_Salmonella_enterica_CVM_N51255_v1.0	-	CVM N51255
Mycobacterium tuberculosis TKK_04_0141	1448598	PRJNA235603	235603	Terrabacteria group	Actinobacteria	4.44877	65.6	-	JJTQ01	66	4363	4150	4/29/14	3/9/17	Contig	Broad Institute	SAMN02586093	GCA_000658795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/795/GCA_000658795.1_Myco_tube_TKK_04_0141_V1	-	TKK_04_0141
Escherichia coli O157:H7 str. EC4192	702431	PRJNA42811	42811	Proteobacteria	Gammaproteobacteria	5.34969	50.2	-	ADUX01	958	5666	5109	5/11/10	5/18/17	Contig	National Bioforensic Analysis Center	SAMN02470602	GCA_000178695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/695/GCA_000178695.1_ASM17869v1	-	EC4192
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07797	39.6	-	CFQE02	139	2278	2052	3/15/15	3/11/17	Contig	SC	SAMEA1032573	GCA_001300255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/255/GCA_001300255.2_6999_6_2	-	234323
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.31747	66.5	-	FRRZ01	58	5954	5813	12/9/16	3/21/17	Contig	DTU	SAMEA2357577	GCA_900147055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/055/GCA_900147055.1_379	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.96675	39	-	NDAW01	134	3942	3718	6/8/17	6/10/17	Contig	JCVI	SAMN06461882	GCA_002183405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/405/GCA_002183405.1_ASM218340v1	-	ABUH608
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.78285	38.9	-	NDAY01	71	3634	3461	6/8/17	6/10/17	Contig	JCVI	SAMN06461879	GCA_002183425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/425/GCA_002183425.1_ASM218342v1	-	ABUH619
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.31635	66.5	-	FRSB01	69	5961	5816	12/9/16	3/21/17	Contig	DTU	SAMEA2357579	GCA_900147065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/065/GCA_900147065.1_380	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04124	39.7	-	CHBG02	149	2207	2004	4/21/15	3/11/17	Contig	SC	SAMEA1032577	GCA_001300275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/275/GCA_001300275.2_6999_1_17	-	R34-3200
Escherichia coli O157:H7 str. EC4084	702432	PRJNA42813	42813	Proteobacteria	Gammaproteobacteria	5.29804	50.2	-	ADUY01	881	5693	4968	5/11/10	8/8/17	Contig	National Bioforensic Analysis Center	SAMN02470600	GCA_000178715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/715/GCA_000178715.1_ASM17871v1	-	EC4084
Mycobacterium tuberculosis TKK_04_0157	1448606	PRJNA235611	235611	Terrabacteria group	Actinobacteria	4.41604	65.6	-	JJTJ01	61	4336	4145	4/29/14	3/9/17	Contig	Broad Institute	SAMN02586101	GCA_000658815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/815/GCA_000658815.1_Myco_tube_TKK_04_0157_V1	-	TKK_04_0157
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.83768	52.1	-	LHMW01	63	4981	4737	8/5/15	2/28/17	Contig	FDA	SAMN03894349	GCA_001246295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/295/GCA_001246295.1_Salmonella_enterica_CVM_N51258_v1.0	-	CVM N51258
Staphylococcus aureus F80381	1410841	PRJNA224472	224472	Terrabacteria group	Firmicutes	2.83814	32.7	-	JDMD01	16	2950	2822	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383761	GCA_000561925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/925/GCA_000561925.1_Stap_aure_F80381_V1	-	F80381
Staphylococcus aureus F80375	1410842	PRJNA224473	224473	Terrabacteria group	Firmicutes	2.82256	32.7	-	JDME01	48	2928	2788	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383762	GCA_000561945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/945/GCA_000561945.1_Stap_aure_F80375_V1	-	F80375
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.94222	52.1	-	LHMV01	68	5089	4793	8/5/15	2/28/17	Contig	FDA	SAMN03894348	GCA_001246305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/305/GCA_001246305.1_Salmonella_enterica_CVM_N51257_v1.0	-	CVM N51257
Mycobacterium tuberculosis	1773	PRJNA241143	241143	Terrabacteria group	Actinobacteria	4.45331	65.6	-	JHAD01	85	4336	4131	5/7/14	3/8/17	Contig	National Health Research Institutes	SAMN02688394	GCA_000685425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/425/GCA_000685425.1_TbC21.0	24903871	C2
Escherichia coli O157:H7 str. EC4127	702433	PRJNA42815	42815	Proteobacteria	Gammaproteobacteria	5.29699	50.2	-	ADUZ01	791	5615	5055	5/11/10	5/18/17	Contig	National Bioforensic Analysis Center	SAMN02470605	GCA_000178735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/735/GCA_000178735.1_ASM17873v1	-	EC4127
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.1254	39.6	-	CFQO02	146	2309	2106	3/15/15	3/11/17	Contig	SC	SAMEA1032579	GCA_001300295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/295/GCA_001300295.2_6999_2_16	-	R34-3222
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.86395	66	-	FRSA01	109	6543	6317	12/9/16	3/21/17	Contig	DTU	SAMEA2357580	GCA_900147075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/075/GCA_900147075.1_381	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.89821	38.9	-	NDAX01	106	3819	3658	6/8/17	6/10/17	Contig	JCVI	SAMN06461881	GCA_002183435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/435/GCA_002183435.1_ASM218343v1	-	ABUH610
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.94806	39	-	NDAZ01	118	3852	3684	6/8/17	6/10/17	Contig	JCVI	SAMN06461878	GCA_002183445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/445/GCA_002183445.1_ASM218344v1	-	ABUH622
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	7.0351	65.9	-	FRSC01	88	6834	6647	12/9/16	3/21/17	Contig	DTU	SAMEA2357581	GCA_900147085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/085/GCA_900147085.1_382	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.03323	39.7	-	CHBF02	117	2215	2021	4/21/15	3/5/17	Contig	SC	SAMEA1032584	GCA_001300315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/315/GCA_001300315.2_6925_2_89	-	R34-3071
Escherichia coli O157:H7 str. EC4191	702434	PRJNA42817	42817	Proteobacteria	Gammaproteobacteria	5.2011	50.2	-	ADVA01	267	5535	5136	5/10/10	5/18/17	Contig	National Bioforensic Analysis Center	SAMN02470604	GCA_000178755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/755/GCA_000178755.1_ASM17875v1	-	EC4191
Mycobacterium tuberculosis	1773	PRJEB5700	244303	Terrabacteria group	Actinobacteria	4.22461	65.4	-	CCBK01	124	4210	4029	4/10/14	3/8/17	Contig	Dept of Clinical Microbiology	SAMEA3139015	GCA_000689535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/535/GCA_000689535.1_NZXDR1	-	NZXDR1
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.72492	52.2	-	LHMY01	63	4788	4561	8/5/15	2/28/17	Contig	FDA	SAMN03894351	GCA_001246355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/355/GCA_001246355.1_Salmonella_enterica_CVM_N51260_v1.0	-	CVM N51260
Staphylococcus aureus T84594	1410845	PRJNA224476	224476	Terrabacteria group	Firmicutes	2.80909	32.8	-	JDMF01	50	2922	2776	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383765	GCA_000561965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/965/GCA_000561965.1_Stap_aure_T84594_V1	-	T84594
Staphylococcus aureus T84592	1410846	PRJNA224477	224477	Terrabacteria group	Firmicutes	2.8204	32.8	-	JDMG01	60	2968	2781	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383766	GCA_000561985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/561/985/GCA_000561985.1_Stap_aure_T84592_V1	-	T84592
Salmonella enterica subsp. enterica serovar Reading	165302	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.61845	52.2	-	LHMZ01	57	4692	4440	8/5/15	2/28/17	Contig	FDA	SAMN03894352	GCA_001246365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/365/GCA_001246365.1_Salmonella_enterica_CVM_N51261_v1.0	-	CVM N51261
Mycobacterium tuberculosis	1773	PRJNA245062	245062	Terrabacteria group	Actinobacteria	4.3776	65.5	-	JMEK01	224	4275	4063	5/22/14	3/8/17	Contig	National Environmental Engineering Research Institute-CSIR	SAMN02731427	GCA_000695365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/365/GCA_000695365.1_Denovo_Genome_Assembly	25146143	C2
Escherichia coli O157:H7 str. EC536	702436	PRJNA42821	42821	Proteobacteria	Gammaproteobacteria	5.26245	50.2	-	ADVC01	678	5589	5074	5/11/10	5/18/17	Contig	National Bioforensic Analysis Center	SAMN02470599	GCA_000178795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/795/GCA_000178795.1_ASM17879v1	-	EC536
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0766	39.5	-	CIKP02	140	2269	2060	4/21/15	3/5/17	Contig	SC	SAMEA1032588	GCA_001300335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/335/GCA_001300335.2_7001_2_10	-	R34-3114
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	7.00514	65.9	-	FRSE01	91	6799	6603	12/9/16	3/21/17	Contig	DTU	SAMEA2357582	GCA_900147095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/095/GCA_900147095.1_383	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.08839	38.9	-	NCXT01	73	4008	3865	6/8/17	6/10/17	Contig	JCVI	SAMN06461854	GCA_002183485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/485/GCA_002183485.1_ASM218348v1	-	ABUH499
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.01005	39	-	NCXV01	136	3905	3696	6/8/17	6/10/17	Contig	JCVI	SAMN06461852	GCA_002183505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/505/GCA_002183505.1_ASM218350v1	-	ABUH505
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.97568	66	-	FRSD01	94	6739	6549	12/9/16	3/21/17	Contig	DTU	SAMEA2357583	GCA_900147105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/105/GCA_900147105.1_384	-	-
Klebsiella pneumoniae	573	PRJEB13452	322383	Proteobacteria	Gammaproteobacteria	5.48677	57.1	-	FKKF01	74	5541	5262	5/21/16	2/21/17	Contig	INSTITUTO NACIONAL DE SALUD	SAMEA3931432	GCA_900079675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/079/675/GCA_900079675.1_KPHVMX_PRJEB13452_wgs.embl.gz	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07391	39.5	-	CHBH02	154	2272	2061	4/21/15	3/11/17	Contig	SC	SAMEA1032592	GCA_001300355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/355/GCA_001300355.2_6952_7_8	-	R34-3169
Escherichia coli MS 85-1	679202	PRJNA40699	40699	Proteobacteria	Gammaproteobacteria	5.45766	50.6	-	ADWQ01	234	5865	5346	6/30/10	5/18/17	Contig	WUGSC	SAMN00189188	GCA_000179075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/075/GCA_000179075.1_ASM17907v1	-	MS 85-1
Mycobacterium tuberculosis TKK_04_0124	1448586	PRJNA235591	235591	Terrabacteria group	Actinobacteria	4.40953	65.7	-	JJUC01	1	4278	4113	6/13/14	3/9/17	Contig	Broad Institute	SAMN02586081	GCA_000706565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/706/565/GCA_000706565.1_Myco_tube_TKK_04_0124_V1	-	TKK_04_0124
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.95011	52.1	-	LHMX01	109	5114	4816	8/5/15	2/28/17	Contig	FDA	SAMN03894350	GCA_001246375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/375/GCA_001246375.1_Salmonella_enterica_CVM_N51259_v1.0	-	CVM N51259
Staphylococcus aureus T84595	1410847	PRJNA224478	224478	Terrabacteria group	Firmicutes	2.82179	32.8	-	JDMH01	61	2953	2788	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383767	GCA_000562005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/005/GCA_000562005.1_Stap_aure_T84595_V1	-	T84595
Staphylococcus aureus H45755	1410848	PRJNA224479	224479	Terrabacteria group	Firmicutes	2.81509	32.8	-	JDMI01	56	2938	2782	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383768	GCA_000562025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/025/GCA_000562025.1_Stap_aure_H45755_V1	-	H45755
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.72684	52.2	-	LHNA01	56	4784	4562	8/5/15	2/28/17	Contig	FDA	SAMN03894353	GCA_001246435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/435/GCA_001246435.1_Salmonella_enterica_CVM_N51262_v1.0	-	CVM N51262
Mycobacterium tuberculosis 2104HD	1438854	PRJNA233350	233350	Terrabacteria group	Actinobacteria	4.41266	65.6	-	JKBV01	92	4333	4119	6/12/14	3/8/17	Contig	Broad Institute	SAMN02567698	GCA_000711635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/635/GCA_000711635.1_Myco_tube_2104HD_V1	-	2104HD
Escherichia coli MS 79-10	796392	PRJNA40701	40701	Proteobacteria	Gammaproteobacteria	4.90009	50.6	-	ADWR01	157	5161	4692	6/30/10	5/18/17	Contig	WUGSC	SAMN00189186	GCA_000179095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/095/GCA_000179095.1_ASM17909v1	-	MS 79-10
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07356	39.6	-	CIIJ02	130	2281	2071	4/21/15	3/11/17	Contig	SC	SAMEA1032614	GCA_001300375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/375/GCA_001300375.2_6999_5_6	-	154389
Klebsiella pneumoniae	573	PRJEB13452	322383	Proteobacteria	Gammaproteobacteria	5.3667	57.5	-	FLLB01	50	5389	5144	5/21/16	2/21/17	Contig	INSTITUTO NACIONAL DE SALUD	SAMEA3993664	GCA_900087895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/895/GCA_900087895.1_KPMX200_PRJEB13450_wgs.embl.gz	-	KpMx1
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.98374	66	-	FRSF01	82	6748	6560	12/9/16	3/21/17	Contig	DTU	SAMEA2357584	GCA_900147115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/115/GCA_900147115.1_385	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.87182	38.9	-	NCXZ01	62	3752	3610	6/8/17	6/10/17	Contig	JCVI	SAMN06461844	GCA_002183515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/515/GCA_002183515.1_ASM218351v1	-	ABUH526
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.08601	38.9	-	NCYA01	88	4030	3862	6/8/17	6/10/17	Contig	JCVI	SAMN06461843	GCA_002183545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/545/GCA_002183545.1_ASM218354v1	-	ABUH529
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.30699	66.5	-	FRSG01	76	6003	5837	12/9/16	3/21/17	Contig	DTU	SAMEA2357585	GCA_900147125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/125/GCA_900147125.1_386	-	-
Klebsiella pneumoniae	573	PRJEB14454	381170	Proteobacteria	Gammaproteobacteria	5.4012	57.3	-	FUZH01	106	5480	5214	3/31/17	4/8/17	Contig	INSTITUT PASTEUR	SAMEA4043120	GCA_900091635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/635/GCA_900091635.1_KP-BJ-STC-c_assembly	-	BJ-STC-c
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.1318	39.6	-	CGDZ02	162	2326	2116	3/15/15	3/11/17	Contig	SC	SAMEA1032633	GCA_001300395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/395/GCA_001300395.2_6999_3_12	-	42397
Escherichia coli MS 145-7	679204	PRJNA40703	40703	Proteobacteria	Gammaproteobacteria	5.11505	50.8	-	ADWS01	143	5454	5024	6/30/10	5/18/17	Contig	WUGSC	SAMN00189169	GCA_000179115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/115/GCA_000179115.1_ASM17911v1	-	MS 145-7
Mycobacterium tuberculosis NRITLD18	1455292	PRJNA237414	237414	Terrabacteria group	Actinobacteria	4.4006	65.6	-	JJSJ01	94	4346	4124	6/12/14	3/8/17	Contig	Broad Institute	SAMN02628507	GCA_000711645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/645/GCA_000711645.1_Myco_tube_NRITLD18_V1	-	NRITLD18
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.6992	52.3	-	LHNE01	61	4810	4561	8/5/15	2/28/17	Contig	FDA	SAMN03894357	GCA_001246465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/465/GCA_001246465.1_Salmonella_enterica_CVM_N51266_v1.0	-	CVM N51266
Staphylococcus aureus H45765	1410849	PRJNA224480	224480	Terrabacteria group	Firmicutes	2.84026	32.7	-	JDMJ01	30	2986	2812	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383769	GCA_000562045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/045/GCA_000562045.1_Stap_aure_H45765_V1	-	H45765
Staphylococcus aureus H45760	1410850	PRJNA224481	224481	Terrabacteria group	Firmicutes	2.831	32.8	-	JDMK01	55	2943	2796	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383770	GCA_000562065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/065/GCA_000562065.1_Stap_aure_H45760_V1	-	H45760
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.72639	52.2	-	LHNB01	57	4776	4556	8/5/15	2/28/17	Contig	FDA	SAMN03894354	GCA_001246475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/475/GCA_001246475.1_Salmonella_enterica_CVM_N51263_v1.0	-	CVM N51263
Mycobacterium tuberculosis MD18115	1447445	PRJNA234558	234558	Terrabacteria group	Actinobacteria	4.38271	65.6	-	JLGI01	89	4326	4118	6/12/14	3/8/17	Contig	Broad Institute	SAMN02584596	GCA_000711655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/655/GCA_000711655.1_Myco_tube_MD18115_V1	-	MD18115
Escherichia coli MS 124-1	679205	PRJNA40707	40707	Proteobacteria	Gammaproteobacteria	5.39413	50.6	-	ADWT01	176	5839	5258	6/30/10	2/22/17	Contig	WUGSC	SAMN00189168	GCA_000179135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/135/GCA_000179135.1_ASM17913v1	-	MS 124-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07967	39.6	-	CHWT02	142	2283	2052	4/21/15	3/11/17	Contig	SC	SAMEA1032634	GCA_001300415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/415/GCA_001300415.2_6930_8_10	-	R34-3016
Klebsiella pneumoniae	573	PRJEB14454	381170	Proteobacteria	Gammaproteobacteria	5.41419	57.3	-	FUKK01	103	5490	5222	3/31/17	4/8/17	Contig	INSTITUT PASTEUR	SAMEA4043118	GCA_900091645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/645/GCA_900091645.1_KP-BJ-STC-a_assembly	-	BJ-STC-a
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.30283	66.5	-	FRSH01	65	5988	5837	12/9/16	3/21/17	Contig	DTU	SAMEA2357586	GCA_900147135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/135/GCA_900147135.1_387	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.08684	38.9	-	NCYB01	88	4025	3865	6/8/17	6/10/17	Contig	JCVI	SAMN06461842	GCA_002183555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/555/GCA_002183555.1_ASM218355v1	-	ABUH532
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.97501	38.9	-	NCYD01	87	3917	3759	6/8/17	6/10/17	Contig	JCVI	SAMN06461839	GCA_002183585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/585/GCA_002183585.1_ASM218358v1	-	ABUH542
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.71896	66.2	-	FRSJ01	240	6618	6310	12/9/16	3/21/17	Contig	DTU	SAMEA2357588	GCA_900147145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/145/GCA_900147145.1_389	-	-
Klebsiella pneumoniae	573	PRJEB14454	381170	Proteobacteria	Gammaproteobacteria	5.38098	57.3	-	FUKL01	134	5425	5197	3/31/17	4/8/17	Contig	INSTITUT PASTEUR	SAMEA4043119	GCA_900091665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/091/665/GCA_900091665.1_KP-BJ-STC-b_assembly	-	BJ-STC-b
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08296	39.7	-	CHBR02	162	2269	2067	4/21/15	3/11/17	Contig	SC	SAMEA1032641	GCA_001300435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/435/GCA_001300435.2_7001_1_17	-	R34-3094
Escherichia coli MS 119-7	679206	PRJNA40709	40709	Proteobacteria	Gammaproteobacteria	4.96869	50.7	-	ADWU01	130	5326	4820	6/30/10	5/18/17	Contig	WUGSC	SAMN00189167	GCA_000179155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/155/GCA_000179155.1_ASM17915v1	-	MS 119-7
Mycobacterium tuberculosis	1773	PRJNA252033	252033	Terrabacteria group	Actinobacteria	4.36996	65.5	-	JNVI02	156	4308	4096	6/27/14	3/10/17	Contig	"VISION RESEARCH FOUNDATION, SANKARA NETHRALAYA"	SAMN02848645	GCA_000715195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/195/GCA_000715195.2_ASM71519v2	25395642	VRFCWCF XDRTB 232
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.7246	52.2	-	LHND01	52	4784	4555	8/5/15	2/28/17	Contig	FDA	SAMN03894356	GCA_001246485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/485/GCA_001246485.1_Salmonella_enterica_CVM_N51265_v1.0	-	CVM N51265
Staphylococcus aureus F83251	1410851	PRJNA224482	224482	Terrabacteria group	Firmicutes	2.78539	32.8	-	JDML01	50	2894	2750	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383771	GCA_000562085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/085/GCA_000562085.1_Stap_aure_F83251_V1	-	F83251
Staphylococcus aureus F83269	1410852	PRJNA224483	224483	Terrabacteria group	Firmicutes	2.78548	32.8	-	JDMM01	43	2889	2757	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383772	GCA_000562105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/105/GCA_000562105.1_Stap_aure_F83269_V1	-	F83269
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.7262	52.2	-	LHNC01	52	4787	4562	8/5/15	2/28/17	Contig	FDA	SAMN03894355	GCA_001246495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/495/GCA_001246495.1_Salmonella_enterica_CVM_N51264_v1.0	-	CVM N51264
Mycobacterium tuberculosis str. Beijing/DS6701	1516074	PRJNA252971	252971	Terrabacteria group	Actinobacteria	4.34296	65.6	-	JOKR01	129	4267	4057	6/27/14	3/9/17	Contig	"Faculty of Medicine Siriraj Hospital, Mahidol University"	SAMN02820311	GCA_000715415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/415/GCA_000715415.1_ASM71541v1	25125647	Beijing/DS6701
Escherichia coli MS 107-1	679207	PRJNA40713	40713	Proteobacteria	Gammaproteobacteria	4.90515	50.6	-	ADWV01	72	5156	4771	6/30/10	5/18/17	Contig	WUGSC	SAMN00189162	GCA_000179175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/175/GCA_000179175.1_ASM17917v1	-	MS 107-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05299	39.5	-	CFJR02	119	2245	2031	3/15/15	3/11/17	Contig	SC	SAMEA1032652	GCA_001300455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/455/GCA_001300455.2_6952_7_6	-	R34-3167
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.53865	57.1	-	FLVZ01	29	5567	5325	7/16/16	2/21/17	Contig	SC	SAMEA3531852	GCA_900093075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/075/GCA_900093075.1_18090_8_60	-	PB473
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.73805	66.2	-	FRSM01	196	6587	6326	12/9/16	3/21/17	Contig	DTU	SAMEA2357590	GCA_900147155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/155/GCA_900147155.1_390	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.84061	38.9	-	NCYF01	110	3758	3601	6/8/17	6/10/17	Contig	JCVI	SAMN06461837	GCA_002183595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/595/GCA_002183595.1_ASM218359v1	-	ABUH550
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.02545	39	-	NCYG01	147	3996	3773	6/8/17	6/10/17	Contig	JCVI	SAMN06461836	GCA_002183625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/625/GCA_002183625.1_ASM218362v1	-	ABUH553
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.36043	66.5	-	FRSI01	99	6019	5849	12/9/16	3/21/17	Contig	DTU	SAMEA2357587	GCA_900147165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/165/GCA_900147165.1_388	-	-
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.40986	57.4	-	FLWB01	39	5441	5172	7/16/16	2/21/17	Contig	SC	SAMEA3531854	GCA_900093115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/115/GCA_900093115.1_18090_8_61	-	PB484
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12422	39.6	-	CIDR02	147	2313	2109	4/21/15	3/11/17	Contig	SC	SAMEA1032656	GCA_001300475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/475/GCA_001300475.2_6999_7_3	-	336850
Escherichia coli NC101	753642	PRJNA47121	47121	Proteobacteria	Gammaproteobacteria	5.02114	50.6	-	AEFA01	27	5115	4817	9/2/10	5/18/17	Contig	Cornell University	SAMN02428923	GCA_000179795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/795/GCA_000179795.1_ASM17979v1	-	NC101
Mycobacterium tuberculosis	1773	PRJNA248335	248335	Terrabacteria group	Actinobacteria	4.44303	65.5	-	JNGF01	190	4443	4144	7/28/14	3/11/17	Contig	National Health Research Institutes	SAMN02797828	GCA_000735595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/595/GCA_000735595.1_ASM73559v1	25189576	A2
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.94677	52.1	-	LHNF01	87	5096	4808	8/5/15	2/28/17	Contig	FDA	SAMN03894358	GCA_001246555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/555/GCA_001246555.1_Salmonella_enterica_CVM_N51267_v1.0	-	CVM N51267
Staphylococcus aureus F83272	1410853	PRJNA224484	224484	Terrabacteria group	Firmicutes	2.8713	32.7	-	JDMN01	21	3012	2889	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383773	GCA_000562125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/125/GCA_000562125.1_Stap_aure_F83272_V1	-	F83272
Staphylococcus aureus T87526	1410854	PRJNA224485	224485	Terrabacteria group	Firmicutes	2.86728	32.8	-	JDMO01	1	3018	2866	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383774	GCA_000562145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/145/GCA_000562145.1_Stap_aure_T87526_V1	-	T87526
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.01551	52.1	-	LHNG01	76	5145	4901	8/5/15	2/28/17	Contig	FDA	SAMN03894359	GCA_001246565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/565/GCA_001246565.1_Salmonella_enterica_CVM_N51268_v1.0	-	CVM N51268
Mycobacterium tuberculosis	1773	PRJNA259167	259167	Terrabacteria group	Actinobacteria	4.32996	65.4	-	JQGH01	188	4332	4115	8/25/14	3/11/17	Contig	"VISION RESEARCH FOUNDATION, SANKARA NETHRALAYA"	SAMN03002394	GCA_000743595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/595/GCA_000743595.1_ASM74359v1	25395642	VRF CWCF XDRTB 1028
Escherichia coli 2362-75	670897	PRJNA40275	40275	Proteobacteria	Gammaproteobacteria	5.17344	50.5	-	ADUL01	83	5532	5022	11/22/10	5/18/17	Contig	Institute for Genome Sciences	SAMN00792453	GCA_000183005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/005/GCA_000183005.2_ASM18300v1	-	2362-75
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.10422	39.6	-	CFIQ02	190	2287	2053	3/15/15	3/6/17	Contig	SC	SAMEA1032664	GCA_001300495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/495/GCA_001300495.2_7001_3_3	-	R34-3137
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.49723	57.3	-	FLVV01	26	5557	5297	7/16/16	2/21/17	Contig	SC	SAMEA3531868	GCA_900093205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/205/GCA_900093205.1_18090_8_68	-	PB525
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.73573	66.2	-	FRSK01	163	6579	6331	12/9/16	3/21/17	Contig	DTU	SAMEA2357592	GCA_900147175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/175/GCA_900147175.1_392	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.80319	38.9	-	NCYJ01	72	3678	3547	6/8/17	6/10/17	Contig	JCVI	SAMN06461824	GCA_002183635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/635/GCA_002183635.1_ASM218363v1	-	ABUH375
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.17281	39	-	NCYM01	92	4132	3973	6/8/17	6/10/17	Contig	JCVI	SAMN06461820	GCA_002183665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/665/GCA_002183665.1_ASM218366v1	-	ABUH388
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.55643	66.1	-	FRSN01	241	6361	6078	12/9/16	3/21/17	Contig	DTU	SAMEA2357593	GCA_900147185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/185/GCA_900147185.1_393	-	-
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.49866	57.3	-	FLWT01	31	5556	5291	7/16/16	2/21/17	Contig	SC	SAMEA3531839	GCA_900093225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/225/GCA_900093225.1_18090_8_56	-	PB388
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04681	39.5	-	CIDQ02	169	2196	2008	4/21/15	3/5/17	Contig	SC	SAMEA1032671	GCA_001300515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/515/GCA_001300515.2_7001_2_21	-	R34-3126
Escherichia coli 3431	670892	PRJNA40265	40265	Proteobacteria	Gammaproteobacteria	5.22342	50.9	-	ADUM01	127	5698	5061	12/29/10	5/18/17	Contig	Institute for Genome Sciences	SAMN00792450	GCA_000184765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/184/765/GCA_000184765.2_ASM18476v2	-	3431
Mycobacterium tuberculosis	1773	PRJEB6629	257264	Terrabacteria group	Actinobacteria	4.34017	65.5	-	CCJS01	109	4321	4073	8/19/14	3/10/17	Contig	TCD	SAMEA2613829	GCA_000751435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/435/GCA_000751435.1_IEXDR1	-	-
"Salmonella enterica subsp. enterica serovar 4,12:i:-"	353569	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.94554	52.2	-	LHNH01	80	5104	4860	8/5/15	5/30/17	Contig	FDA	SAMN03894361	GCA_001246615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/615/GCA_001246615.1_Salmonella_enterica_CVM_N51270_v1.0	-	CVM N51270
Staphylococcus aureus W73060	1410855	PRJNA224486	224486	Terrabacteria group	Firmicutes	2.8775	32.8	-	JDMP01	2	3028	2874	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383775	GCA_000562165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/165/GCA_000562165.1_Stap_aure_W73060_V1	-	W73060
Staphylococcus aureus H48649	1410856	PRJNA224487	224487	Terrabacteria group	Firmicutes	2.77506	32.8	-	JDMQ01	40	2924	2753	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383776	GCA_000562185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/185/GCA_000562185.1_Stap_aure_H48649_V1	-	H48649
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.94704	52.1	-	LHNI01	67	5069	4823	8/5/15	2/28/17	Contig	FDA	SAMN03894363	GCA_001246625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/625/GCA_001246625.1_Salmonella_enterica_CVM_N51272_v1.0	-	CVM N51272
Mycobacterium tuberculosis	1773	PRJEB7009	258517	Terrabacteria group	Actinobacteria	4.32937	65.5	-	CCSJ01	150	4307	4058	8/27/14	3/10/17	Contig	TCD	SAMEA2707494	GCA_000751795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/795/GCA_000751795.1_NZ3MDR1	-	-
Escherichia coli O157:H7 str. G5101	926026	PRJNA60057	60057	Proteobacteria	Gammaproteobacteria	5.06156	50.5486	plasmid p0157_2:NZ_AETX01000217.1/AETX01000217.1	AETX01	217	5345	4886	1/31/11	5/18/17	Contig	FDA	SAMN02952912	GCA_000187285.4	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/285/GCA_000187285.4_ASM18728v4	21317333	G5101
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07599	39.5	-	CHBL02	162	2242	2020	4/21/15	3/6/17	Contig	SC	SAMEA1032677	GCA_001300535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/535/GCA_001300535.2_6999_4_8	-	101058
Klebsiella pneumoniae	573	PRJEB8766	291369	Proteobacteria	Gammaproteobacteria	5.22231	58.1	-	FWIV01	16	5183	4962	3/29/17	4/3/17	Contig	SC	SAMEA3531575	GCA_900172635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/635/GCA_900172635.1_18090_4_64	-	VRCO0079
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.74469	66.2	-	FRSL01	129	6564	6335	12/9/16	3/21/17	Contig	DTU	SAMEA2357591	GCA_900147195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/195/GCA_900147195.1_391	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.72595	38.9	-	NCYO01	36	3546	3411	6/8/17	6/10/17	Contig	JCVI	SAMN06461818	GCA_002183675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/675/GCA_002183675.1_ASM218367v1	-	ABUH397
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.04326	39	-	NCYS01	129	4013	3796	6/8/17	6/10/17	Contig	JCVI	SAMN06461813	GCA_002183705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/705/GCA_002183705.1_ASM218370v1	-	ABUH421
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.56386	66.1	-	FRSO01	216	6345	6087	12/9/16	3/21/17	Contig	DTU	SAMEA2357594	GCA_900147205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/205/GCA_900147205.1_394	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.28651	57.3	-	FWNI01	28	5232	5017	3/29/17	4/3/17	Contig	SC	SAMEA4362657	GCA_900173825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/825/GCA_900173825.1_20925_2_128	-	VRCO0448
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05937	39.5	-	CHXD02	176	2199	2016	4/21/15	3/5/17	Contig	SC	SAMEA1032680	GCA_001300555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/555/GCA_001300555.2_6999_4_7	-	95344
Escherichia coli O157:H- str. 493-89	926027	PRJNA60059	60059	Proteobacteria	Gammaproteobacteria	5.05482	50.5	-	AETY01	204	5314	4898	1/31/11	5/18/17	Contig	FDA	SAMN02952913	GCA_000187305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/305/GCA_000187305.2_ASM18730v2	21317333	493-89
Mycobacterium tuberculosis	1773	PRJNA267046	267046	Terrabacteria group	Actinobacteria	4.36566	65.6	-	JUEW01	119	4287	4073	12/18/14	3/11/17	Contig	International Tuberculosis Research Center	SAMN03177466	GCA_000803725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/725/GCA_000803725.1_ASM80372v1	-	KT-0183
Salmonella enterica subsp. enterica serovar Senftenberg	28150	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.84786	52	-	LHNK01	48	4918	4681	8/5/15	2/28/17	Contig	FDA	SAMN03894365	GCA_001246655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/655/GCA_001246655.1_Salmonella_enterica_CVM_N51274_v1.0	-	CVM N51274
Staphylococcus aureus H48646	1410857	PRJNA224488	224488	Terrabacteria group	Firmicutes	2.86726	32.7	-	JDMR01	21	3002	2869	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383777	GCA_000562205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/205/GCA_000562205.1_Stap_aure_H48646_V1	-	H48646
Staphylococcus aureus T81559	1410858	PRJNA224489	224489	Terrabacteria group	Firmicutes	2.89121	32.8	-	JDMS01	81	3027	2861	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383778	GCA_000562225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/225/GCA_000562225.1_Stap_aure_T81559_V1	-	T81559
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.9976	51.9	-	LHNJ01	76	5090	4812	8/5/15	2/28/17	Contig	FDA	SAMN03894364	GCA_001246665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/665/GCA_001246665.1_Salmonella_enterica_CVM_N51273_v1.0	-	CVM N51273
Mycobacterium tuberculosis	1773	PRJNA267045	267045	Terrabacteria group	Actinobacteria	4.3597	65.6	-	JUEV01	116	4278	4063	12/18/14	3/10/17	Contig	International Tuberculosis Research Center	SAMN03177465	GCA_000803735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/735/GCA_000803735.1_ASM80373v1	-	KT-0182
Escherichia coli O157:H- str. H 2687	926028	PRJNA60061	60061	Proteobacteria	Gammaproteobacteria	5.04819	50.5	-	AETZ01	209	5285	4888	1/31/11	5/18/17	Contig	FDA	SAMN02952914	GCA_000187325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/325/GCA_000187325.2_ASM18732v2	21317333	H 2687
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.99977	39.7	-	CFJS02	112	2162	1969	3/15/15	3/5/17	Contig	SC	SAMEA1032682	GCA_001300575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/575/GCA_001300575.2_6999_4_1	-	74124
Klebsiella pneumoniae	573	PRJEB20048	379729	Proteobacteria	Gammaproteobacteria	5.57518	57.2	-	FWPK01	74	5630	5375	3/29/17	4/3/17	Contig	Faculty of medecine and pharmacy RABAT	SAMEA103928498	GCA_900174435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/435/GCA_900174435.1_Acinetobacter_baumannii	-	KP5M
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.33871	66.3	-	FRSR01	270	6143	5836	12/9/16	3/21/17	Contig	DTU	SAMEA2357595	GCA_900147215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/215/GCA_900147215.1_395	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.00354	39	-	NCYP01	122	3973	3769	6/8/17	6/10/17	Contig	JCVI	SAMN06461817	GCA_002183725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/725/GCA_002183725.1_ASM218372v1	-	ABUH400
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.12603	39	-	NCYU01	77	4064	3917	6/8/17	6/10/17	Contig	JCVI	SAMN06461811	GCA_002183735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/735/GCA_002183735.1_ASM218373v1	-	ABUH425
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.56882	66.2	-	FRSP01	163	6309	6104	12/9/16	3/21/17	Contig	DTU	SAMEA2357596	GCA_900147225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/225/GCA_900147225.1_396	-	-
Klebsiella pneumoniae	573	PRJEB20350	384947	Proteobacteria	Gammaproteobacteria	5.6278	57.3	-	FWYI01	340	5623	5355	5/1/17	5/9/17	Contig	UNIMI	SAMEA103965637	GCA_900176585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/585/GCA_900176585.1_KP4898	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04187	39.6	-	CHWW02	157	2192	1992	4/21/15	3/5/17	Contig	SC	SAMEA1032683	GCA_001300595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/595/GCA_001300595.2_7001_2_6	-	R34-3110
Escherichia coli O55:H7 str. 3256-97	926029	PRJNA60063	60063	Proteobacteria	Gammaproteobacteria	5.08362	50.6	-	AEUA01	188	5341	4912	1/31/11	5/18/17	Contig	FDA	SAMN02952915	GCA_000187345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/345/GCA_000187345.2_ASM18734v2	21317333	3256-97 TW 07815
Mycobacterium tuberculosis	1773	PRJNA266909	266909	Terrabacteria group	Actinobacteria	4.37559	65.6	-	JTFM01	115	4291	4089	12/18/14	3/11/17	Contig	International Tuberculosis Research Center	SAMN03175163	GCA_000803745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/745/GCA_000803745.1_ASM80374v1	-	KT-0181
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.05092	52.1	-	LHNL01	82	5191	4949	8/5/15	2/28/17	Contig	FDA	SAMN03894366	GCA_001246695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/695/GCA_001246695.1_Salmonella_enterica_CVM_N51275_v1.0	-	CVM N51275
Staphylococcus aureus T87965	1410860	PRJNA224491	224491	Terrabacteria group	Firmicutes	2.72061	32.7	-	JDMT01	40	2817	2675	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383780	GCA_000562245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/245/GCA_000562245.1_Stap_aure_T87965_V1	-	T87965
Staphylococcus aureus T87972	1410861	PRJNA224492	224492	Terrabacteria group	Firmicutes	2.83128	32.8	-	JDMU01	64	2950	2802	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383781	GCA_000562265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/265/GCA_000562265.1_Stap_aure_T87972_V1	-	T87972
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.98412	52.1	-	LHNM01	79	5116	4884	8/5/15	2/28/17	Contig	FDA	SAMN03894367	GCA_001246705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/705/GCA_001246705.1_Salmonella_enterica_CVM_N51276_v1.0	-	CVM N51276
Mycobacterium tuberculosis	1773	PRJNA267047	267047	Terrabacteria group	Actinobacteria	4.3678	65.6	-	JUEX01	117	4291	4072	12/18/14	3/11/17	Contig	International Tuberculosis Research Center	SAMN03177469	GCA_000803755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/755/GCA_000803755.1_ASM80375v1	26893431	KT-0184
Escherichia coli O55:H7 str. USDA 5905	926030	PRJNA60065	60065	Proteobacteria	Gammaproteobacteria	5.10528	50.5	-	AEUB01	154	5363	4911	1/31/11	5/18/17	Contig	FDA	SAMN02952916	GCA_000187365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/365/GCA_000187365.2_ASM18736v2	21317333	USDA 5905
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08145	39.6	-	CHWS02	185	2274	2063	4/21/15	3/5/17	Contig	SC	SAMEA1032684	GCA_001300615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/615/GCA_001300615.2_6999_1_13	-	R34-3196
Klebsiella pneumoniae	573	PRJEB20243	381570	Proteobacteria	Gammaproteobacteria	5.67273	57	-	FWYP01	138	5756	5347	4/13/17	4/22/17	Contig	Faculty of medecine and pharmacy RABAT	SAMEA103975586	GCA_900176825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/825/GCA_900176825.1_KP04M	-	Kp04_M
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	7.31187	65.4	-	FRSS01	481	7410	6940	12/9/16	3/21/17	Contig	DTU	SAMEA2357597	GCA_900147235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/235/GCA_900147235.1_397	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.08692	38.9	-	NCYX01	74	4013	3871	6/8/17	6/10/17	Contig	JCVI	SAMN06461808	GCA_002183765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/765/GCA_002183765.1_ASM218376v1	-	ABUH434
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.04359	39	-	NCYY01	66	3962	3818	6/8/17	6/10/17	Contig	JCVI	SAMN06461807	GCA_002183785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/785/GCA_002183785.1_ASM218378v1	-	ABUH437
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.60323	66.3	-	FRSQ01	243	6450	6158	12/9/16	3/21/17	Contig	DTU	SAMEA2357598	GCA_900147245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/245/GCA_900147245.1_398	-	-
Klebsiella pneumoniae	573	PRJEB20243	381570	Proteobacteria	Gammaproteobacteria	5.44104	57.3	-	FWYS01	83	5495	5186	4/13/17	4/22/17	Contig	Faculty of medecine and pharmacy RABAT	SAMEA103975584	GCA_900176855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/855/GCA_900176855.1_KP02M	-	Kp02_M
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06897	39.6	-	CFQD02	221	2228	2014	3/15/15	3/15/17	Contig	SC	SAMEA1032685	GCA_001300635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/635/GCA_001300635.2_6952_4_17	-	481643
Escherichia coli O157:H7 str. LSU-61	926032	PRJNA60067	60067	Proteobacteria	Gammaproteobacteria	5.04828	50.6	-	AEUC01	189	5302	4871	1/31/11	5/18/17	Contig	FDA	SAMN02952917	GCA_000187385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/187/385/GCA_000187385.2_ASM18738v2	-	LSU-61
Mycobacterium tuberculosis	1773	PRJNA267048	267048	Terrabacteria group	Actinobacteria	4.35781	65.6	-	JUEY01	110	4283	4069	12/18/14	3/11/17	Contig	International Tuberculosis Research Center	SAMN03177470	GCA_000803805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/805/GCA_000803805.1_ASM80380v1	-	KT-0185
Salmonella enterica subsp. enterica serovar Albany	211968	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.774	52.1	-	LHNN01	41	4829	4599	8/5/15	2/28/17	Contig	FDA	SAMN03894369	GCA_001246755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/755/GCA_001246755.1_Salmonella_enterica_CVM_N51278_v1.0	-	CVM N51278
Staphylococcus aureus F89441	1410862	PRJNA224493	224493	Terrabacteria group	Firmicutes	2.82063	32.8	-	JDMV01	55	2935	2803	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383782	GCA_000562285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/285/GCA_000562285.1_Stap_aure_F89441_V1	-	F89441
Staphylococcus aureus F89468	1410863	PRJNA224494	224494	Terrabacteria group	Firmicutes	2.86467	32.8	-	JDMW01	75	3000	2828	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383783	GCA_000562305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/305/GCA_000562305.1_Stap_aure_F89468_V1	-	F89468
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.86813	52.2	-	LHNO01	63	4977	4748	8/5/15	2/28/17	Contig	FDA	SAMN03894370	GCA_001246765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/765/GCA_001246765.1_Salmonella_enterica_CVM_N51279_v1.0	-	CVM N51279
Mycobacterium tuberculosis	1773	PRJNA267049	267049	Terrabacteria group	Actinobacteria	4.35737	65.6	-	JUEZ01	119	4282	4070	12/18/14	3/11/17	Contig	International Tuberculosis Research Center	SAMN03177471	GCA_000803825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/825/GCA_000803825.1_ASM80382v1	-	KT-0186
Escherichia coli EPECa14	670893	PRJNA40267	40267	Proteobacteria	Gammaproteobacteria	5.4353	50.5	-	ADUN01	199	6058	5272	2/10/11	8/8/17	Contig	Institute for Genome Sciences	SAMN00792451	GCA_000188755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/755/GCA_000188755.2_ASM18875v2	-	EPECa14
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06196	39.7	-	CIIR02	188	2249	2018	4/21/15	3/11/17	Contig	SC	SAMEA1032703	GCA_001300655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/655/GCA_001300655.2_6952_4_4	-	430772
Klebsiella pneumoniae	573	PRJEB20243	381570	Proteobacteria	Gammaproteobacteria	5.46135	57.1	-	FWYR01	98	5431	5154	4/13/17	4/22/17	Contig	Faculty of medecine and pharmacy RABAT	SAMEA103975585	GCA_900176905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/905/GCA_900176905.1_KP03M	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	7.16661	65.5	-	FRSU01	490	7277	6747	12/9/16	3/21/17	Contig	DTU	SAMEA2357601	GCA_900147255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/255/GCA_900147255.1_400	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.0206	39	-	NCZC01	122	3984	3787	6/8/17	6/10/17	Contig	JCVI	SAMN06461803	GCA_002183805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/805/GCA_002183805.1_ASM218380v1	-	ABUH454
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.10241	39	-	NCZF01	69	4042	3897	6/8/17	6/10/17	Contig	JCVI	SAMN06461800	GCA_002183815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/815/GCA_002183815.1_ASM218381v1	-	ABUH464
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	7.23949	65.6	-	FRST01	367	7235	6808	12/9/16	3/21/17	Contig	DTU	SAMEA2357599	GCA_900147265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/265/GCA_900147265.1_399	-	-
Klebsiella pneumoniae	573	PRJEB20243	381570	Proteobacteria	Gammaproteobacteria	5.58092	57.2	-	FWZI01	81	5633	5373	4/13/17	4/22/17	Contig	Faculty of medecine and pharmacy RABAT	SAMEA103975587	GCA_900177035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/035/GCA_900177035.1_KP06M	-	KP06M
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.1104	39.6	-	CHXA02	284	2309	2081	4/21/15	3/11/17	Contig	SC	SAMEA1032705	GCA_001300675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/675/GCA_001300675.2_7001_2_5	-	R34-3109
Escherichia coli E128010	670894	PRJNA40269	40269	Proteobacteria	Gammaproteobacteria	5.22127	50.6	-	ADUO01	284	5849	5094	2/10/11	5/18/17	Contig	Institute for Genome Sciences	SAMN00792452	GCA_000188775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/775/GCA_000188775.2_ASM18877v2	-	E128010
Mycobacterium tuberculosis	1773	PRJNA267050	267050	Terrabacteria group	Actinobacteria	4.37193	65.6	-	JUFA01	98	4271	4085	12/18/14	3/10/17	Contig	International Tuberculosis Research Center	SAMN03177473	GCA_000803845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/845/GCA_000803845.1_ASM80384v1	-	KT-0187
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.36991	51.7	-	LHNQ01	118	5570	5246	8/5/15	2/28/17	Contig	FDA	SAMN03894372	GCA_001246805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/805/GCA_001246805.1_Salmonella_enterica_CVM_N51281_v1.0	-	CVM N51281
Staphylococcus aureus T12923	1410865	PRJNA224496	224496	Terrabacteria group	Firmicutes	2.92141	32.8	-	JDMX01	26	3100	2939	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383785	GCA_000562325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/325/GCA_000562325.1_Stap_aure_T12923_V1	-	T12923
Staphylococcus aureus W79328	1410866	PRJNA224497	224497	Terrabacteria group	Firmicutes	2.83487	32.8	-	JDMY01	50	2972	2837	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383786	GCA_000562345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/345/GCA_000562345.1_Stap_aure_W79328_V1	-	W79328
Salmonella enterica subsp. enterica serovar Derby	28144	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.94176	52	-	LHNP01	100	5080	4809	8/5/15	2/28/17	Contig	FDA	SAMN03894371	GCA_001246825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/825/GCA_001246825.1_Salmonella_enterica_CVM_N51280_v1.0	-	CVM N51280
Mycobacterium tuberculosis	1773	PRJNA267051	267051	Terrabacteria group	Actinobacteria	4.35967	65.6	-	JUFB01	111	4268	4070	12/18/14	3/11/17	Contig	International Tuberculosis Research Center	SAMN03177474	GCA_000803865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/865/GCA_000803865.1_ASM80386v1	-	KT-0188
Escherichia coli OK1180	670904	PRJNA40289	40289	Proteobacteria	Gammaproteobacteria	5.55456	50.5	-	ADUQ01	86	6051	5426	2/10/11	5/18/17	Contig	Institute for Genome Sciences	SAMN00792455	GCA_000188835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/835/GCA_000188835.2_ASM18883v2	-	OK1180
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06346	39.5	-	CHBI02	139	2223	2026	4/21/15	3/11/17	Contig	SC	SAMEA1032709	GCA_001300695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/695/GCA_001300695.2_6999_2_20	-	R34-3226
Klebsiella pneumoniae subsp. pneumoniae 12-3578	1306950	PRJNA193667	193667	Proteobacteria	Gammaproteobacteria	5.74206	57.1	-	AQOC01	183	5874	5538	4/17/13	5/18/17	Scaffold	"Beijing institution of Radiation Medicine, Beijing, China"	SAMN02045512	GCA_000367165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/165/GCA_000367165.1_ASM36716v1	-	Dec-78
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	7.15284	65.5	-	FRSV01	536	7291	6720	12/9/16	3/21/17	Contig	DTU	SAMEA2357602	GCA_900147275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/275/GCA_900147275.1_401	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.07504	39	-	NCZH01	70	4011	3869	6/8/17	6/10/17	Contig	JCVI	SAMN06461798	GCA_002183845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/845/GCA_002183845.1_ASM218384v1	-	ABUH475
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.01412	39	-	NCZJ01	124	3978	3778	6/8/17	6/10/17	Contig	JCVI	SAMN06461856	GCA_002183855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/855/GCA_002183855.1_ASM218385v1	-	ABUH485
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	7.20016	65.5	-	FRSW01	475	7290	6754	12/9/16	3/21/17	Contig	DTU	SAMEA2357603	GCA_900147285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/285/GCA_900147285.1_402	-	-
Klebsiella pneumoniae subsp. pneumoniae UKKV901664	1343063	PRJNA207005	207005	Proteobacteria	Gammaproteobacteria	5.75636	57	-	ATEZ01	200	5949	5670	7/22/13	2/21/17	Scaffold	"Chunlab, Inc."	SAMN02469600	GCA_000439185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/185/GCA_000439185.1_UKKV901664	-	UKKV901664
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04647	39.5	-	CHWX02	157	2206	2016	4/21/15	3/11/17	Contig	SC	SAMEA1032712	GCA_001300715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/715/GCA_001300715.2_7001_2_23	-	R34-3130
Escherichia coli OK1357	670905	PRJNA40291	40291	Proteobacteria	Gammaproteobacteria	5.27707	50.6	-	ADUR01	180	5562	5081	2/10/11	5/18/17	Contig	Institute for Genome Sciences	SAMN00792456	GCA_000188855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/855/GCA_000188855.2_ASM18885v2	-	OK1357
Mycobacterium tuberculosis	1773	PRJNA267052	267052	Terrabacteria group	Actinobacteria	4.36446	65.6	-	JUFC01	130	4305	4080	12/18/14	3/11/17	Contig	International Tuberculosis Research Center	SAMN03177475	GCA_000803885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/885/GCA_000803885.1_ASM80388v1	-	KT-0189
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.75297	52.1	-	LHNR01	39	4837	4611	8/5/15	2/28/17	Contig	FDA	SAMN03894373	GCA_001246855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/855/GCA_001246855.1_Salmonella_enterica_CVM_N51282_v1.0	-	CVM N51282
Staphylococcus aureus H54403	1410867	PRJNA224498	224498	Terrabacteria group	Firmicutes	2.83972	32.8	-	JDMZ01	56	2980	2828	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383787	GCA_000562365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/365/GCA_000562365.1_Stap_aure_H54403_V1	-	H54403
Staphylococcus aureus F92753	1410868	PRJNA224499	224499	Terrabacteria group	Firmicutes	2.83385	32.8	-	JDNA01	71	2955	2803	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383788	GCA_000562385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/385/GCA_000562385.1_Stap_aure_F92753_V1	-	F92753
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.93286	52.1	-	LHNS01	84	5053	4796	8/5/15	2/28/17	Contig	FDA	SAMN03894374	GCA_001246875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/875/GCA_001246875.1_Salmonella_enterica_CVM_N51283_v1.0	-	CVM N51283
Mycobacterium tuberculosis	1773	PRJNA267053	267053	Terrabacteria group	Actinobacteria	4.35897	65.6	-	JUFD01	118	4286	4072	12/18/14	3/11/17	Contig	International Tuberculosis Research Center	SAMN03177477	GCA_000803905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/905/GCA_000803905.1_ASM80390v1	-	KT-0190
Escherichia coli RN587/1	670899	PRJNA40279	40279	Proteobacteria	Gammaproteobacteria	5.06158	50.6	-	ADUS01	73	5409	4952	2/10/11	5/18/17	Contig	Institute for Genome Sciences	SAMN00792454	GCA_000188875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/875/GCA_000188875.2_ASM18887v2	23868135	RN587/1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09482	39.6	-	CIDV02	165	2275	2072	4/21/15	3/11/17	Contig	SC	SAMEA1032714	GCA_001300735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/735/GCA_001300735.2_6999_6_8	-	266035
Klebsiella pneumoniae subsp. pneumoniae KKBO-1	1384549	PRJNA214751	214751	Proteobacteria	Gammaproteobacteria	5.87635	57.1	-	AVFC01	157	6019	5809	11/7/13	2/20/17	Scaffold	University of Siena	SAMN02314416	GCA_000495875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/875/GCA_000495875.1_SeK50	23979739	KKBO-1
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	7.16115	65.6	-	FRSX01	393	7186	6722	12/9/16	3/21/17	Contig	DTU	SAMEA2357604	GCA_900147295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/295/GCA_900147295.1_403	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.16384	39	-	NCZL01	87	4107	3956	6/8/17	6/10/17	Contig	JCVI	SAMN06461796	GCA_002183875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/875/GCA_002183875.1_ASM218387v1	-	ABUH345
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.19172	39	-	NCZM01	75	4130	3982	6/8/17	6/10/17	Contig	JCVI	SAMN06461795	GCA_002183905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/905/GCA_002183905.1_ASM218390v1	-	ABUH347
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	7.22586	65.6	-	FRSY01	313	7178	6793	12/9/16	3/21/17	Contig	DTU	SAMEA2357605	GCA_900147305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/305/GCA_900147305.1_404	-	-
Klebsiella pneumoniae subsp. pneumoniae KKBO-4	1384550	PRJNA214752	214752	Proteobacteria	Gammaproteobacteria	5.83342	57.1	-	AVFD01	140	6055	5771	11/7/13	2/21/17	Scaffold	University of Siena	SAMN02314415	GCA_000495895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/895/GCA_000495895.2_SfK50	23979739	KKBO-4
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05391	39.6	-	CHBO02	188	2194	1979	4/21/15	3/11/17	Contig	SC	SAMEA1032716	GCA_001300755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/755/GCA_001300755.2_7001_2_8	-	R34-3112
Escherichia coli O157:H7 str. 1044	997824	PRJEA61463	61463	Proteobacteria	Gammaproteobacteria	5.48771	50.4	-	AERP01	70	5890	5478	3/16/11	5/18/17	Contig	Virginia Bioinformatics Institute	SAMN02472077	GCA_000192665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/665/GCA_000192665.2_ASM19266v2	-	1044
Mycobacterium tuberculosis	1773	PRJNA267054	267054	Terrabacteria group	Actinobacteria	4.35086	65.6	-	JUFE01	110	4262	4053	12/18/14	3/11/17	Contig	International Tuberculosis Research Center	SAMN03177478	GCA_000803925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/925/GCA_000803925.1_ASM80392v1	-	KT-0191
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.79923	52.1	-	LHNT01	54	4934	4690	8/5/15	2/28/17	Contig	FDA	SAMN03894375	GCA_001246885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/885/GCA_001246885.1_Salmonella_enterica_CVM_N51284_v1.0	-	CVM N51284
Staphylococcus aureus F92765	1410869	PRJNA224500	224500	Terrabacteria group	Firmicutes	2.83454	32.8	-	JDNB01	31	2989	2824	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383789	GCA_000562405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/405/GCA_000562405.1_Stap_aure_F92765_V1	-	F92765
Staphylococcus aureus S11444	1410870	PRJNA224501	224501	Terrabacteria group	Firmicutes	2.8476	32.8	-	JDNC01	59	2996	2832	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383790	GCA_000562425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/425/GCA_000562425.1_Stap_aure_S11444_V1	-	S11444
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.75857	52.1	-	LHNU01	52	4853	4623	8/5/15	2/28/17	Contig	FDA	SAMN03894376	GCA_001246915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/915/GCA_001246915.1_Salmonella_enterica_CVM_N51285_v1.0	-	CVM N51285
Mycobacterium tuberculosis	1773	PRJNA267143	267143	Terrabacteria group	Actinobacteria	4.39088	65.6	-	JUFF01	113	4287	4081	12/18/14	3/10/17	Contig	International Tuberculosis Research Center	SAMN03177480	GCA_000803945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/945/GCA_000803945.1_ASM80394v1	26798104	KT-0192
Escherichia coli O157:H7 str. 1125	997825	PRJNA61473	61473	Proteobacteria	Gammaproteobacteria	5.56962	50.3	-	AERR01	57	5983	5522	3/16/11	5/18/17	Contig	Virginia Bioinformatics Institute	SAMN02472080	GCA_000192685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/685/GCA_000192685.2_ASM19268v2	-	1125
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09555	39.7	-	CFQU02	215	2291	2061	3/15/15	3/11/17	Contig	SC	SAMEA1032718	GCA_001300775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/775/GCA_001300775.2_6999_6_22	-	323485
Klebsiella pneumoniae	573	PRJNA247286	247286	Proteobacteria	Gammaproteobacteria	5.56494	57.2	-	JRQE01	9	5561	5292	10/8/14	2/21/17	Scaffold	The Forsyth Institute	SAMN02776996	GCA_000764635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/764/635/GCA_000764635.1_ASM76463v1	25428975	BAMC 07-18
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.47047	66.4	-	FRSZ01	199	6246	5987	12/9/16	3/21/17	Contig	DTU	SAMEA2357606	GCA_900147315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/315/GCA_900147315.1_405	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.82069	39	-	NCZQ01	45	3705	3537	6/8/17	6/10/17	Contig	JCVI	SAMN06461886	GCA_002183925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/925/GCA_002183925.1_ASM218392v1	-	ABUH360
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.05459	39	-	NCZT01	71	3974	3838	6/8/17	6/10/17	Contig	JCVI	SAMN06461826	GCA_002183945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/945/GCA_002183945.1_ASM218394v1	-	ABUH371
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.44797	66.4	-	FRTA01	236	6259	5967	12/9/16	3/21/17	Contig	DTU	SAMEA2357607	GCA_900147325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/325/GCA_900147325.1_406	-	-
Klebsiella pneumoniae	573	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	5.59083	57.1	-	JSZL01	67	5589	5247	12/1/14	2/21/17	Scaffold	Miami University	SAMN03078684	GCA_000788025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/025/GCA_000788025.1_ASM78802v1	25593250	4640
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06673	39.6	-	CIDS02	271	2201	2008	4/21/15	3/11/17	Contig	SC	SAMEA1032731	GCA_001300795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/795/GCA_001300795.2_6952_4_1	-	420881
Escherichia coli O157:H7 str. EC1212	941435	PRJEA61465	61465	Proteobacteria	Gammaproteobacteria	5.51005	50.4	-	AERQ01	32	5897	5456	1/27/11	5/18/17	Contig	Virginia Bioinformatics Institute	SAMN02472078	GCA_000193955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/955/GCA_000193955.2_ASM19395v2	-	EC1212
Mycobacterium tuberculosis	1773	PRJNA267144	267144	Terrabacteria group	Actinobacteria	4.36486	65.6	-	JUFG01	119	4277	4075	12/18/14	3/11/17	Contig	International Tuberculosis Research Center	SAMN03177481	GCA_000803965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/965/GCA_000803965.1_ASM80396v1	26868407	KT-0133
"Salmonella enterica subsp. enterica serovar 4,5,12:i-"	1697389	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.94397	52.2	-	LHNW01	78	5085	4856	8/5/15	3/22/17	Contig	FDA	SAMN03894378	GCA_001246945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/945/GCA_001246945.1_Salmonella_enterica_CVM_N51287_v1.0	-	CVM N51287
Staphylococcus aureus T16281	1410871	PRJNA224502	224502	Terrabacteria group	Firmicutes	2.78915	32.8	-	JDND01	43	2902	2774	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383791	GCA_000562445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/445/GCA_000562445.1_Stap_aure_T16281_V1	-	T16281
Staphylococcus aureus W82303	1410872	PRJNA224503	224503	Terrabacteria group	Firmicutes	2.77568	32.8	-	JDNE01	48	2901	2730	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383792	GCA_000562465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/465/GCA_000562465.1_Stap_aure_W82303_V1	-	W82303
Salmonella enterica subsp. enterica serovar Montevideo	115981	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.66808	52.2	-	LHNX01	47	4719	4479	8/5/15	2/28/17	Contig	FDA	SAMN03894379	GCA_001246955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/955/GCA_001246955.1_Salmonella_enterica_CVM_N51288_v1.0	-	CVM N51288
Mycobacterium tuberculosis	1773	PRJNA267146	267146	Terrabacteria group	Actinobacteria	4.37472	65.6	-	JUFH01	116	4305	4086	12/18/14	3/11/17	Contig	International Tuberculosis Research Center	SAMN03177483	GCA_000803985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/803/985/GCA_000803985.1_ASM80398v1	-	KT-0193
Escherichia coli WV_060327	945433	PRJNA61477	61477	Proteobacteria	Gammaproteobacteria	4.6815	50.6	-	AERT01	28	4852	4512	1/27/11	5/18/17	Contig	Virginia Bioinformatics Institute	SAMN02472083	GCA_000193975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/975/GCA_000193975.2_ASM19397v2	-	WV_060327
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07065	39.6	-	CFLQ02	144	2222	2020	3/15/15	3/5/17	Contig	SC	SAMEA1032739	GCA_001300815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/815/GCA_001300815.2_6999_7_13	-	372297
Klebsiella pneumoniae	573	PRJNA270953	270953	Proteobacteria	Gammaproteobacteria	5.73872	56.9	-	JXBF01	75	5750	5520	1/14/15	2/21/17	Scaffold	The University of Queensland	SAMN03271887	GCA_000817855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/855/GCA_000817855.1_ASM81785v1	-	ST147
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	7.24431	65.6	-	FRTB01	332	7232	6845	12/9/16	3/21/17	Contig	DTU	SAMEA2357609	GCA_900147335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/335/GCA_900147335.1_408	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.02006	39	-	NCZV01	114	3940	3779	6/8/17	6/10/17	Contig	JCVI	SAMN06461876	GCA_002183955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/955/GCA_002183955.1_ASM218395v1	-	ABUH628
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.80588	38.9	-	NCZX01	64	3686	3557	6/8/17	6/10/17	Contig	JCVI	SAMN06461874	GCA_002183975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/183/975/GCA_002183975.1_ASM218397v1	-	ABUH632
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	7.23391	65.6	-	FRTC01	368	7236	6814	12/9/16	3/21/17	Contig	DTU	SAMEA2357608	GCA_900147345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/345/GCA_900147345.1_407	-	-
Klebsiella pneumoniae	573	PRJNA271839	271839	Proteobacteria	Gammaproteobacteria	5.55404	57.1	-	JXCH01	63	5616	5400	1/15/15	2/21/17	Scaffold	The University of Queensland	SAMN03278119	GCA_000818615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/615/GCA_000818615.1_ASM81861v1	-	ST485
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.10543	39.7	-	CHBE02	186	2299	2083	4/21/15	3/5/17	Contig	SC	SAMEA1032741	GCA_001300835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/835/GCA_001300835.2_6925_1_57	-	R34-3038
Escherichia coli EC4100B	945434	PRJNA61479	61479	Proteobacteria	Gammaproteobacteria	5.1119	50.5	-	AERU01	42	5413	4934	1/27/11	2/22/17	Contig	Virginia Bioinformatics Institute	SAMN02472081	GCA_000193995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/995/GCA_000193995.2_ASM19399v2	-	EC4100B
Mycobacterium tuberculosis	1773	PRJNA267147	267147	Terrabacteria group	Actinobacteria	4.37684	65.6	-	JUFI01	137	4289	4052	12/18/14	3/11/17	Contig	International Tuberculosis Research Center	SAMN03177484	GCA_000804005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/005/GCA_000804005.1_ASM80400v1	-	KT-0194
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.79175	52.1	-	LHNV01	49	4893	4660	8/5/15	2/28/17	Contig	FDA	SAMN03894377	GCA_001246965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/965/GCA_001246965.1_Salmonella_enterica_CVM_N51286_v1.0	-	CVM N51286
Staphylococcus aureus H57815	1410874	PRJNA224505	224505	Terrabacteria group	Firmicutes	2.827	32.8	-	JDNF01	64	2956	2811	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383794	GCA_000562485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/485/GCA_000562485.1_Stap_aure_H57815_V1	-	H57815
Staphylococcus aureus W76127	1410875	PRJNA224506	224506	Terrabacteria group	Firmicutes	2.69123	32.7	-	JDNG01	39	2780	2625	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383795	GCA_000562505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/505/GCA_000562505.1_Stap_aure_W76127_V1	-	W76127
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.94987	52.1	-	LHNY01	75	5113	4820	8/5/15	2/28/17	Contig	FDA	SAMN03894380	GCA_001246985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/246/985/GCA_001246985.1_Salmonella_enterica_CVM_N51289_v1.0	-	CVM N51289
Mycobacterium tuberculosis	1773	PRJNA267149	267149	Terrabacteria group	Actinobacteria	4.35279	65.6	-	JUFJ01	104	4255	4068	12/18/14	3/11/17	Contig	International Tuberculosis Research Center	SAMN03177485	GCA_000804025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/025/GCA_000804025.1_ASM80402v1	-	KT-0195
Escherichia coli 1.2741	869669	PRJNA51085	51085	Proteobacteria	Gammaproteobacteria	5.68567	50.3	-	AEZI02	28	6002	5487	3/28/11	5/18/17	Contig	E. coli Reference Center	SAMN02436330	GCA_000194175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/175/GCA_000194175.2_ASM19417v2	-	1.2741
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0412	39.7	-	CFQW02	161	2202	2004	3/15/15	3/5/17	Contig	SC	SAMEA1032746	GCA_001300855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/855/GCA_001300855.2_6999_4_11	-	105542
Klebsiella pneumoniae	573	PRJEB6543	266303	Proteobacteria	Gammaproteobacteria	5.69847	57.1	-	CCHF01	315	5988	5516	11/4/14	2/21/17	Scaffold	UNIMI	SAMEA2602955	GCA_000822345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/822/345/GCA_000822345.1_57BG	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	7.45131	65.2	-	FRTD01	318	7449	7096	12/9/16	3/21/17	Contig	DTU	SAMEA2357612	GCA_900147355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/355/GCA_900147355.1_410	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.00621	39	-	NDAA01	160	3992	3762	6/8/17	6/10/17	Contig	JCVI	SAMN06461871	GCA_002184005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/005/GCA_002184005.1_ASM218400v1	-	ABUH641
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.95	39	-	NDAE01	150	3938	3716	6/8/17	6/10/17	Contig	JCVI	SAMN06461867	GCA_002184025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/025/GCA_002184025.1_ASM218402v1	-	ABUH653
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	7.34136	65.4	-	FRTG01	453	7394	6934	12/9/16	3/21/17	Contig	DTU	SAMEA2357610	GCA_900147365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/365/GCA_900147365.1_409	-	-
Klebsiella pneumoniae	573	PRJEB8009	275602	Proteobacteria	Gammaproteobacteria	5.98761	56.5	-	CDQG01	97	6029	5703	2/18/15	2/21/17	Scaffold	WTSI	SAMEA2072940	GCA_000943095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/943/095/GCA_000943095.1_ST15	-	ST15 NDM-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.03614	39.6	-	CFJW02	135	2210	2017	3/15/15	3/5/17	Contig	SC	SAMEA1462970	GCA_001300875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/875/GCA_001300875.2_7553_4_10	-	ND6123
Escherichia coli 97.0246	869670	PRJNA51087	51087	Proteobacteria	Gammaproteobacteria	5.49747	50.6	-	AEZJ02	49	5996	5362	3/28/11	5/18/17	Contig	E. coli Reference Center	SAMN02436471	GCA_000194215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/215/GCA_000194215.2_ASM19421v2	-	97.0246
Mycobacterium tuberculosis	1773	PRJNA267150	267150	Terrabacteria group	Actinobacteria	4.35231	65.6	-	JUFK01	104	4274	4072	12/18/14	3/10/17	Contig	International Tuberculosis Research Center	SAMN03177486	GCA_000804045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/045/GCA_000804045.1_ASM80404v1	-	KT-0196
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.9706	52.1	-	LHNZ01	59	5118	4834	8/5/15	2/28/17	Contig	FDA	SAMN03894381	GCA_001247055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/055/GCA_001247055.1_Salmonella_enterica_CVM_N51290_v1.0	-	CVM N51290
Staphylococcus aureus H71785	1410876	PRJNA224507	224507	Terrabacteria group	Firmicutes	2.84974	32.7	-	JDNH01	24	2990	2860	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383796	GCA_000562525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/525/GCA_000562525.1_Stap_aure_H71785_V1	-	H71785
Staphylococcus aureus H71781	1410879	PRJNA224510	224510	Terrabacteria group	Firmicutes	2.83731	32.7	-	JDNI01	23	2979	2857	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383799	GCA_000562545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/545/GCA_000562545.1_Stap_aure_H71781_V1	-	H71781
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.04289	52	-	LHOB01	118	5185	4914	8/5/15	2/28/17	Contig	FDA	SAMN03894383	GCA_001247075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/075/GCA_001247075.1_Salmonella_enterica_CVM_N51292_v1.0	-	CVM N51292
Mycobacterium tuberculosis	1773	PRJNA267151	267151	Terrabacteria group	Actinobacteria	4.36639	65.6	-	JUFL01	113	4287	4080	12/18/14	3/11/17	Contig	International Tuberculosis Research Center	SAMN03177487	GCA_000804055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/055/GCA_000804055.1_ASM80405v1	-	KT-0197
Escherichia coli 97.0259	869672	PRJNA51091	51091	Proteobacteria	Gammaproteobacteria	5.21238	50.5	-	AEZL02	36	5423	4993	3/28/11	5/18/17	Contig	E. coli Reference Center	SAMN02436638	GCA_000194235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/235/GCA_000194235.2_ASM19423v2	-	97.0259
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05381	39.5	-	CFRQ02	122	2239	2031	3/15/15	3/5/17	Contig	SC	SAMEA1462973	GCA_001300895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/895/GCA_001300895.2_7622_5_81	-	ND6039
Klebsiella pneumoniae	573	PRJNA278892	278892	Proteobacteria	Gammaproteobacteria	5.37162	57.3	-	LAFW01	54	5362	5137	3/20/15	2/21/17	Scaffold	CDPH	SAMN02996354	GCA_000958945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/945/GCA_000958945.1_matepair3	25977423	CDPH3823
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.80655	66.1	-	FRTE01	301	6581	6276	12/9/16	3/21/17	Contig	DTU	SAMEA2357614	GCA_900147375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/375/GCA_900147375.1_411	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	3.85044	38.9	-	NDAJ01	100	3744	3590	6/8/17	6/10/17	Contig	JCVI	SAMN06461861	GCA_002184035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/035/GCA_002184035.1_ASM218403v1	-	ABUH680
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.02841	38.9	-	NDAR01	80	3955	3804	6/8/17	6/10/17	Contig	JCVI	SAMN06461828	GCA_002184055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/055/GCA_002184055.1_ASM218405v1	-	ABUH586
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.80593	66.1	-	FRTH01	338	6606	6278	12/9/16	3/21/17	Contig	DTU	SAMEA2357615	GCA_900147385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/385/GCA_900147385.1_412	-	-
Klebsiella pneumoniae	573	PRJNA278893	278893	Proteobacteria	Gammaproteobacteria	5.37802	57.3	-	LAFU01	59	5365	5145	3/20/15	2/21/17	Scaffold	CDPH	SAMN02996355	GCA_000958965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/958/965/GCA_000958965.1_matepair4	25977423	CDPH5262
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00018	39.7	-	CHXN02	128	2138	1957	4/21/15	3/5/17	Contig	SC	SAMEA1462976	GCA_001300915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/915/GCA_001300915.2_7622_5_59	-	MD5081
Escherichia coli 97.0264	869676	PRJNA51099	51099	Proteobacteria	Gammaproteobacteria	5.17762	50.7	-	AEZP02	13	5394	4998	3/28/11	2/23/17	Contig	E. coli Reference Center	SAMN02436632	GCA_000194295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/295/GCA_000194295.2_ASM19429v2	-	97.0264
Mycobacterium tuberculosis	1773	PRJNA267152	267152	Terrabacteria group	Actinobacteria	4.3637	65.6	-	JUFM01	119	4272	4068	12/18/14	3/11/17	Contig	International Tuberculosis Research Center	SAMN03177488	GCA_000804065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/065/GCA_000804065.1_ASM80406v1	-	KT-0140
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91356	52	-	LHOC01	76	4979	4690	8/5/15	2/28/17	Contig	FDA	SAMN03894385	GCA_001247085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/085/GCA_001247085.1_Salmonella_enterica_CVM_N51294_v1.0	-	CVM N51294
Staphylococcus aureus W20433	1410880	PRJNA224511	224511	Terrabacteria group	Firmicutes	2.84753	32.8	-	JDNJ01	71	2994	2837	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383800	GCA_000562565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/565/GCA_000562565.1_Stap_aure_W20433_V1	-	W20433
Staphylococcus aureus T45945	1410882	PRJNA224513	224513	Terrabacteria group	Firmicutes	2.91678	32.7	-	JDNK01	25	3105	2942	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383802	GCA_000562585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/585/GCA_000562585.1_Stap_aure_T45945_V1	-	T45945
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91407	51.9	-	LHOA01	63	5007	4767	8/5/15	2/28/17	Contig	FDA	SAMN03894382	GCA_001247105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/105/GCA_001247105.1_Salmonella_enterica_CVM_N51291_v1.0	-	CVM N51291
Mycobacterium tuberculosis	1773	PRJNA267153	267153	Terrabacteria group	Actinobacteria	4.35654	65.6	-	JUFN01	107	4282	4065	12/18/14	3/11/17	Contig	International Tuberculosis Research Center	SAMN03177489	GCA_000804105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/105/GCA_000804105.1_ASM80410v1	-	KT-0198
Escherichia coli 4.0522	869681	PRJNA51109	51109	Proteobacteria	Gammaproteobacteria	5.83435	50.5	-	AEZU02	109	6384	5780	3/28/11	5/18/17	Contig	E. coli Reference Center	SAMN02436552	GCA_000194335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/335/GCA_000194335.2_ASM19433v2	-	4.0522
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08878	39.5	-	CFQZ02	133	2264	2049	3/15/15	3/15/17	Contig	SC	SAMEA1462978	GCA_001300935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/935/GCA_001300935.2_7553_5_78	-	PT8044
Klebsiella pneumoniae	573	PRJNA279858	279858	Proteobacteria	Gammaproteobacteria	5.63809	57.2	-	LART01	233	5739	5434	4/8/15	2/21/17	Scaffold	Centers for Disease Control and Prevention	SAMN03451033	GCA_000971075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/971/075/GCA_000971075.1_ASM97107v1	-	ST-437
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.89373	66	-	FRTF01	367	6746	6391	12/9/16	3/21/17	Contig	DTU	SAMEA2357619	GCA_900147395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/395/GCA_900147395.1_414	-	-
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.14265	39	-	NDAT01	99	4115	3957	6/8/17	6/10/17	Contig	JCVI	SAMN06461793	GCA_002184085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/085/GCA_002184085.1_ASM218408v1	-	ABUH592
Acinetobacter baumannii	470	PRJNA352251	352251	Proteobacteria	Gammaproteobacteria	4.05783	39	-	NDBA01	91	4015	3863	6/8/17	6/10/17	Contig	JCVI	SAMN06461877	GCA_002184105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/105/GCA_002184105.1_ASM218410v1	-	ABUH625
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.9083	66	-	FRTI01	345	6746	6401	12/9/16	3/21/17	Contig	DTU	SAMEA2357617	GCA_900147405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/405/GCA_900147405.1_413	-	-
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.41511	57.2	-	JVXH01	581	5599	5103	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197209	GCA_001052515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/515/GCA_001052515.1_ASM105251v1	26230489	1243_CKOS
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09844	39.5	-	CFLP02	149	2297	2088	3/15/15	3/5/17	Contig	SC	SAMEA1462982	GCA_001300955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/955/GCA_001300955.2_7622_4_2	-	GL3075
Escherichia coli JB1-95	869682	PRJNA51111	51111	Proteobacteria	Gammaproteobacteria	5.40949	50.4	-	AEZV02	143	5895	5334	3/28/11	5/18/17	Contig	E. coli Reference Center	SAMN02436634	GCA_000194355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/355/GCA_000194355.2_ASM19435v2	-	JB1-95
Mycobacterium tuberculosis	1773	PRJNA267154	267154	Terrabacteria group	Actinobacteria	4.34373	65.6	-	JUFO01	120	4266	4054	12/18/14	3/11/17	Contig	International Tuberculosis Research Center	SAMN03177490	GCA_000804125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/125/GCA_000804125.1_ASM80412v1	-	KT-0026
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.74148	52.1	-	LHOD01	52	4835	4598	8/5/15	2/28/17	Contig	FDA	SAMN03894388	GCA_001247145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/145/GCA_001247145.1_Salmonella_enterica_CVM_N51297_v1.0	-	CVM N51297
Staphylococcus aureus T49833	1410885	PRJNA224516	224516	Terrabacteria group	Firmicutes	2.82194	32.8	-	JDNM01	48	2983	2809	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383805	GCA_000562615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/615/GCA_000562615.1_Stap_aure_T49833_V1	-	T49833
Staphylococcus aureus H23829	1410886	PRJNA224517	224517	Terrabacteria group	Firmicutes	2.88991	32.8	-	JDNN01	26	3047	2882	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383806	GCA_000562635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/635/GCA_000562635.1_Stap_aure_H23829_V1	-	H23829
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.98072	52.1	-	LHOF01	64	5120	4879	8/5/15	2/28/17	Contig	FDA	SAMN03894390	GCA_001247185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/185/GCA_001247185.1_Salmonella_enterica_CVM_N51299_v1.0	-	CVM N51299
Mycobacterium tuberculosis	1773	PRJNA267155	267155	Terrabacteria group	Actinobacteria	4.37773	65.6	-	JUFP01	106	4288	4096	12/18/14	3/10/17	Contig	International Tuberculosis Research Center	SAMN03177491	GCA_000804145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/145/GCA_000804145.1_ASM80414v1	-	KT-0199
Escherichia coli 5.0959	869684	PRJNA51115	51115	Proteobacteria	Gammaproteobacteria	5.41695	50.6	-	AEZX02	29	5773	5223	3/29/11	2/22/17	Contig	E. coli Reference Center	SAMN02436635	GCA_000194395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/395/GCA_000194395.2_ASM19439v2	-	5.0959
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0336	39.7	-	CHXB02	118	2196	2006	4/21/15	3/5/17	Contig	SC	SAMEA1462985	GCA_001300975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/975/GCA_001300975.2_7622_3_50	-	CH2016
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.35878	57.4	-	JVJG01	170	5286	5061	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197574	GCA_001055015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/015/GCA_001055015.1_ASM105501v1	26230489	383_ECLO
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.96408	65.8	-	FRTM01	509	6909	6425	12/9/16	3/21/17	Contig	DTU	SAMEA2357620	GCA_900147415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/415/GCA_900147415.1_415	-	-
Acinetobacter baumannii	470	PRJNA384065	384065	Proteobacteria	Gammaproteobacteria	4.16194	39	-	NEQE01	94	4114	3954	6/9/17	6/12/17	Contig	JCVI	SAMN06827909	GCA_002184265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/265/GCA_002184265.1_ASM218426v1	-	ARLG-1818
Acinetobacter baumannii	470	PRJNA384065	384065	Proteobacteria	Gammaproteobacteria	3.90013	38.9	-	NEQF01	135	3795	3613	6/9/17	6/12/17	Contig	JCVI	SAMN06827878	GCA_002184275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/275/GCA_002184275.1_ASM218427v1	-	ARLG-1775
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	7.01237	65.8	-	FRTJ01	346	6849	6501	12/9/16	3/21/17	Contig	DTU	SAMEA2357621	GCA_900147425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/425/GCA_900147425.1_416	-	-
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.35604	57.4	-	JVMR01	192	5282	5057	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197485	GCA_001056275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/275/GCA_001056275.1_ASM105627v1	26230489	291_EBAC
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12812	39.6	-	CFIS02	182	2322	2101	3/15/15	3/6/17	Contig	SC	SAMEA1462987	GCA_001300995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/300/995/GCA_001300995.2_7553_4_11	-	ND6124
Escherichia coli 1.2264	869675	PRJNA51097	51097	Proteobacteria	Gammaproteobacteria	5.50484	50.6	-	AEZO02	31	5789	5368	3/28/11	5/18/17	Contig	E. coli Reference Center	SAMN02436331	GCA_000194415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/415/GCA_000194415.2_ASM19441v2	-	1.2264
Mycobacterium tuberculosis	1773	PRJNA267156	267156	Terrabacteria group	Actinobacteria	4.36133	65.6	-	JUFQ01	113	4286	4068	12/18/14	3/11/17	Contig	International Tuberculosis Research Center	SAMN03177492	GCA_000804165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/165/GCA_000804165.1_ASM80416v1	-	KT-0200
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.97941	52.1	-	LHOE01	51	5154	4837	8/5/15	2/28/17	Contig	FDA	SAMN03894389	GCA_001247195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/195/GCA_001247195.1_Salmonella_enterica_CVM_N51298_v1.0	-	CVM N51298
Staphylococcus aureus H23830	1410887	PRJNA224518	224518	Terrabacteria group	Firmicutes	2.87999	32.7	-	JDNO01	18	3011	2885	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383807	GCA_000562655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/655/GCA_000562655.1_Stap_aure_H23830_V1	-	H23830
Staphylococcus aureus T72838	1410891	PRJNA224522	224522	Terrabacteria group	Firmicutes	2.82252	32.8	-	JDNP01	52	2965	2810	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383811	GCA_000562675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/675/GCA_000562675.1_Stap_aure_T72838_V1	-	T72838
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.00681	52.1	-	LHOG01	98	5131	4885	8/5/15	2/28/17	Contig	FDA	SAMN03894391	GCA_001247205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/205/GCA_001247205.1_Salmonella_enterica_CVM_N51300_v1.0	-	CVM N51300
Mycobacterium tuberculosis	1773	PRJNA267157	267157	Terrabacteria group	Actinobacteria	4.36053	65.6	-	JUFR01	121	4292	4083	12/18/14	3/11/17	Contig	International Tuberculosis Research Center	SAMN03177493	GCA_000804185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/185/GCA_000804185.1_ASM80418v1	-	KT-0201
Escherichia coli 99.0741	869678	PRJNA51103	51103	Proteobacteria	Gammaproteobacteria	5.45121	50.7	-	AEZR02	84	5834	5317	3/28/11	5/18/17	Contig	E. coli Reference Center	SAMN00113720	GCA_000194435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/435/GCA_000194435.2_ASM19443v2	-	99.0741
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05987	39.6	-	CFLR02	173	2214	2026	3/15/15	3/11/17	Contig	SC	SAMEA1462989	GCA_001301015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/015/GCA_001301015.2_7553_5_79	-	PT8052
Klebsiella pneumoniae subsp. ozaenae	574	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.17954	57.6	-	JVKF01	103	5073	4893	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197549	GCA_001056485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/485/GCA_001056485.1_ASM105648v1	26230489	359_ECLO
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.98972	65.7	-	FRTO01	479	6913	6451	12/9/16	3/21/17	Contig	DTU	SAMEA2357622	GCA_900147435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/435/GCA_900147435.1_417	-	-
Acinetobacter baumannii	470	PRJNA384065	384065	Proteobacteria	Gammaproteobacteria	4.04777	38.9	-	NEQJ01	187	3991	3799	6/9/17	6/12/17	Contig	JCVI	SAMN06827874	GCA_002184285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/285/GCA_002184285.1_ASM218428v1	-	ARLG-1915
Acinetobacter baumannii	470	PRJNA384065	384065	Proteobacteria	Gammaproteobacteria	4.06336	38.8	-	NEQG01	64	3996	3846	6/9/17	6/12/17	Contig	JCVI	SAMN06827877	GCA_002184325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/325/GCA_002184325.1_ASM218432v1	-	ARLG-1788
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.11459	66.5	-	FRTK01	260	5938	5497	12/9/16	3/21/17	Contig	DTU	SAMEA2357624	GCA_900147445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/445/GCA_900147445.1_419	-	-
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.22215	57.4	-	JUUC01	338	5271	4925	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197968	GCA_001058365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/365/GCA_001058365.1_ASM105836v1	26230489	76_ECLO
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00578	39.7	-	CHBS02	240	2118	1955	4/21/15	3/11/17	Contig	SC	SAMEA1462990	GCA_001301035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/035/GCA_001301035.2_7553_5_77	-	PT8040
Escherichia coli 9.1649	869685	PRJNA51117	51117	Proteobacteria	Gammaproteobacteria	5.10836	50.6	-	AEZY02	30	5222	4859	3/29/11	2/23/17	Contig	E. coli Reference Center	SAMN02436636	GCA_000194475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/475/GCA_000194475.2_ASM19447v2	-	9.1649
Mycobacterium tuberculosis	1773	PRJNA267158	267158	Terrabacteria group	Actinobacteria	4.36662	65.6	-	JUFS01	117	4288	4084	12/18/14	3/11/17	Contig	International Tuberculosis Research Center	SAMN03177494	GCA_000804205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/205/GCA_000804205.1_ASM80420v1	-	KT-0202
Salmonella enterica subsp. enterica serovar Mbandaka	192954	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.73684	52.1	-	LHOI01	60	4840	4587	8/5/15	2/28/17	Contig	FDA	SAMN03894393	GCA_001247255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/255/GCA_001247255.1_Salmonella_enterica_CVM_N51302_v1.0	-	CVM N51302
Staphylococcus aureus W56227	1410892	PRJNA224523	224523	Terrabacteria group	Firmicutes	2.76733	32.7	-	JDNQ01	59	2871	2696	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383812	GCA_000562695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/695/GCA_000562695.1_Stap_aure_W56227_V1	-	W56227
Staphylococcus aureus W56243	1410893	PRJNA224524	224524	Terrabacteria group	Firmicutes	2.76699	32.7	-	JDNR01	55	2878	2690	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383813	GCA_000562715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/715/GCA_000562715.1_Stap_aure_W56243_V1	-	W56243
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.95513	52.1	-	LHOH01	71	5077	4832	8/5/15	2/28/17	Contig	FDA	SAMN03894392	GCA_001247265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/265/GCA_001247265.1_Salmonella_enterica_CVM_N51301_v1.0	-	CVM N51301
Mycobacterium tuberculosis	1773	PRJNA267159	267159	Terrabacteria group	Actinobacteria	4.36288	65.6	-	JUFT01	112	4295	4069	12/18/14	3/11/17	Contig	International Tuberculosis Research Center	SAMN03177495	GCA_000804225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/225/GCA_000804225.1_ASM80422v1	-	KT-0203
Escherichia coli 4.0967	869687	PRJNA51121	51121	Proteobacteria	Gammaproteobacteria	5.87082	50.4	-	AFAA02	41	6378	5937	3/29/11	2/22/17	Contig	E. coli Reference Center	SAMN02436474	GCA_000194495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/495/GCA_000194495.2_ASM19449v2	-	4.0967
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06409	39.6	-	CHXI02	144	2229	2027	4/21/15	3/11/17	Contig	SC	SAMEA1462993	GCA_001301055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/055/GCA_001301055.2_7622_5_89	-	ND6064
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.29545	57.4	-	JWGI01	253	5245	5002	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03196974	GCA_001060105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/105/GCA_001060105.1_ASM106010v1	26230489	1012_KPNE
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.33515	66.5	-	FRTL01	168	6065	5772	12/9/16	3/21/17	Contig	DTU	SAMEA2357623	GCA_900147455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/455/GCA_900147455.1_418	-	-
Acinetobacter baumannii	470	PRJNA384065	384065	Proteobacteria	Gammaproteobacteria	3.86418	38.9	-	NEQH01	56	3759	3618	6/9/17	6/12/17	Contig	JCVI	SAMN06827876	GCA_002184335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/335/GCA_002184335.1_ASM218433v1	-	ARLG-1777
Acinetobacter baumannii	470	PRJNA384065	384065	Proteobacteria	Gammaproteobacteria	4.01183	39	-	NEQK01	136	3908	3697	6/9/17	6/12/17	Contig	JCVI	SAMN06827873	GCA_002184365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/365/GCA_002184365.1_ASM218436v1	-	ARLG-1860
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.14234	66.6	-	FRTN01	204	5923	5514	12/9/16	3/21/17	Contig	DTU	SAMEA2357626	GCA_900147465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/465/GCA_900147465.1_420	-	-
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.44335	57.1	-	JWDA01	242	5396	5168	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197060	GCA_001060275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/275/GCA_001060275.1_ASM106027v1	26230489	1098_KPNE
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.98206	39.8	-	CFJV02	308	2109	1911	3/15/15	3/11/17	Contig	SC	SAMEA1462999	GCA_001301075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/075/GCA_001301075.2_7553_4_12	-	ND6130
Escherichia coli 2.3916	869688	PRJNA51123	51123	Proteobacteria	Gammaproteobacteria	5.6393	50.6	-	AFAB02	234	6214	5594	3/29/11	5/18/17	Contig	E. coli Reference Center	SAMN02436637	GCA_000194535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/535/GCA_000194535.2_ASM19453v2	-	2.3916
Mycobacterium tuberculosis	1773	PRJNA267160	267160	Terrabacteria group	Actinobacteria	4.39629	65.6	-	JUFU01	104	4292	4111	12/18/14	3/10/17	Contig	International Tuberculosis Research Center	SAMN03177496	GCA_000804245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/245/GCA_000804245.1_ASM80424v1	-	KT-0022
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.89655	52.1	-	LHOJ01	71	5039	4809	8/5/15	2/28/17	Contig	FDA	SAMN03894394	GCA_001247275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/275/GCA_001247275.1_Salmonella_enterica_CVM_N51303_v1.0	-	CVM N51303
Staphylococcus aureus W56246	1410894	PRJNA224525	224525	Terrabacteria group	Firmicutes	2.76736	32.7	-	JDNS01	59	2874	2688	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383814	GCA_000562735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/735/GCA_000562735.1_Stap_aure_W56246_V1	-	W56246
Staphylococcus aureus F74023	1410898	PRJNA224529	224529	Terrabacteria group	Firmicutes	2.88132	32.8	-	JDNT01	76	3030	2881	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383818	GCA_000562755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/755/GCA_000562755.1_Stap_aure_F74023_V1	-	F74023
Salmonella enterica subsp. enterica serovar Worthington	1160769	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.885	52.2	-	LHOK01	61	4976	4713	8/5/15	2/28/17	Contig	FDA	SAMN03894395	GCA_001247285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/285/GCA_001247285.1_Salmonella_enterica_CVM_N51304_v1.0	-	CVM N51304
Mycobacterium tuberculosis	1773	PRJNA267162	267162	Terrabacteria group	Actinobacteria	4.34268	65.6	-	JUFV01	106	4280	4057	12/18/14	3/10/17	Contig	International Tuberculosis Research Center	SAMN03177497	GCA_000804265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/265/GCA_000804265.1_ASM80426v1	-	KT-0005
Escherichia coli 2.4168	869690	PRJNA51127	51127	Proteobacteria	Gammaproteobacteria	4.74406	51	-	AFAD02	19	4957	4555	3/29/11	5/18/17	Contig	E. coli Reference Center	SAMN00109820	GCA_000194555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/555/GCA_000194555.2_ASM19455v2	-	2.4168
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06131	39.5	-	CFKB02	139	2240	2035	3/15/15	3/11/17	Contig	SC	SAMEA1463011	GCA_001301095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/095/GCA_001301095.2_7553_4_22	-	ND6144
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.26571	57.4	-	JVZX01	148	5265	5056	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197141	GCA_001060495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/495/GCA_001060495.1_ASM106049v1	26230489	1183_KPNE
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.11355	66.6	-	FRTP01	287	5940	5459	12/9/16	3/21/17	Contig	DTU	SAMEA2357627	GCA_900147475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/475/GCA_900147475.1_421	-	-
Acinetobacter baumannii	470	PRJNA384065	384065	Proteobacteria	Gammaproteobacteria	3.96868	39	-	NEQL01	142	3943	3720	6/9/17	6/12/17	Contig	JCVI	SAMN06827872	GCA_002184385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/385/GCA_002184385.1_ASM218438v1	-	ARLG-1894
Acinetobacter baumannii	470	PRJNA384065	384065	Proteobacteria	Gammaproteobacteria	4.00516	39	-	NEQI01	116	3964	3765	6/9/17	6/12/17	Contig	JCVI	SAMN06827875	GCA_002184565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/565/GCA_002184565.1_ASM218456v1	-	ARLG-1854
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.31726	66.5	-	FRTQ01	183	6061	5755	12/9/16	3/21/17	Contig	DTU	SAMEA2357628	GCA_900147485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/485/GCA_900147485.1_422	-	-
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.4921	57.3	-	JWFB01	294	5552	5299	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197007	GCA_001060895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/895/GCA_001060895.1_ASM106089v1	26230489	1041_KPNE
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06116	39.6	-	CIIT02	152	2239	2025	4/21/15	3/11/17	Contig	SC	SAMEA1463020	GCA_001301115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/115/GCA_001301115.2_7553_5_89	-	PT8081
Escherichia coli STEC_7v	754082	PRJNA48269	48269	Proteobacteria	Gammaproteobacteria	5.19583	50.4	-	AEXD01	29	5362	4938	3/30/11	2/22/17	Contig	Institute for Genome Sciences	SAMN00792436	GCA_000194575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/575/GCA_000194575.2_ASM19457v2	-	STEC_7v
Mycobacterium tuberculosis	1773	PRJNA267512	267512	Terrabacteria group	Actinobacteria	4.37703	65.6	-	JUFW01	115	4292	4081	12/18/14	3/11/17	Contig	International Tuberculosis Research Center	SAMN03196604	GCA_000804285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/285/GCA_000804285.1_ASM80428v1	26847902	KT-0204
Salmonella enterica subsp. enterica serovar Johannesburg	913076	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.54455	52.2	-	LHOL01	51	4610	4363	8/5/15	2/28/17	Contig	FDA	SAMN03894396	GCA_001247345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/345/GCA_001247345.1_Salmonella_enterica_CVM_N51305_v1.0	-	CVM N51305
Staphylococcus aureus H37776	1410902	PRJNA224533	224533	Terrabacteria group	Firmicutes	2.87075	32.8	-	JDNU01	27	3012	2874	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383822	GCA_000562775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/775/GCA_000562775.1_Stap_aure_H37776_V1	-	H37776
Staphylococcus aureus H37781	1410903	PRJNA224534	224534	Terrabacteria group	Firmicutes	2.85651	32.7	-	JDNV01	27	3003	2869	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383823	GCA_000562795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/795/GCA_000562795.1_Stap_aure_H37781_V1	-	H37781
Salmonella enterica subsp. enterica serovar Anatum	58712	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.73109	52.1	-	LHON01	38	4840	4606	8/5/15	2/28/17	Contig	FDA	SAMN03894398	GCA_001247355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/355/GCA_001247355.1_Salmonella_enterica_CVM_N51307_v1.0	-	CVM N51307
Mycobacterium tuberculosis	1773	PRJNA270259	270259	Terrabacteria group	Actinobacteria	4.2407	65.4	-	JWIA01	243	4236	3992	12/19/14	3/10/17	Contig	Mahidol University	SAMN03265108	GCA_000805885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/885/GCA_000805885.1_ASM80588v1	25700413	Manu ancestor SIT523
Escherichia coli 3.2303	869691	PRJNA51129	51129	Proteobacteria	Gammaproteobacteria	4.94623	50.5	-	AFAE02	35	5250	4781	3/29/11	2/22/17	Contig	E. coli Reference Center	SAMN00031773	GCA_000194645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/645/GCA_000194645.2_ASM19464v2	-	3.2303
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04817	39.7	-	CFQT02	156	2234	2025	3/15/15	3/11/17	Contig	SC	SAMEA1463026	GCA_001301135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/135/GCA_001301135.2_7622_2_25	-	BR1080
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.46163	57.2	-	JVXM01	515	5629	5226	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197204	GCA_001061315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/315/GCA_001061315.1_ASM106131v1	26230489	1239_KPNE
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.28279	66.5	-	FRTS01	249	6104	5778	12/9/16	3/21/17	Contig	DTU	SAMEA2357629	GCA_900147495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/495/GCA_900147495.1_423	-	-
Acinetobacter baumannii	470	PRJNA384065	384065	Proteobacteria	Gammaproteobacteria	4.01943	38.9	-	NEQM01	125	3946	3778	6/9/17	6/12/17	Contig	JCVI	SAMN06827910	GCA_002184605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/184/605/GCA_002184605.1_ASM218460v1	-	ARLG-1912
Acinetobacter baumannii	470	PRJNA386615	386615	Proteobacteria	Gammaproteobacteria	4.18344	39.1	-	NGKM01	104	4100	3909	6/19/17	6/22/17	Contig	Federation University Australia	SAMN07109418	GCA_002197745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/745/GCA_002197745.1_ASM219774v1	-	AB360
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.30375	66.5	-	FRTY01	328	6129	5760	12/9/16	3/21/17	Contig	DTU	SAMEA2357636	GCA_900147505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/505/GCA_900147505.1_428	-	-
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.44434	57.1	-	JVTI01	271	5476	5185	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197312	GCA_001061605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/605/GCA_001061605.1_ASM106160v1	26230489	1331_KPNE
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07223	39.6	-	CIEC02	145	2259	2027	4/21/15	3/11/17	Contig	SC	SAMEA1463028	GCA_001301155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/155/GCA_001301155.2_7553_5_90	-	PT8082
Escherichia coli 3003	869692	PRJNA51131	51131	Proteobacteria	Gammaproteobacteria	4.91733	50.7	-	AFAF02	8	5187	4845	3/29/11	2/22/17	Contig	E. coli Reference Center	SAMN00031774	GCA_000194665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/665/GCA_000194665.2_ASM19466v2	-	3003
Mycobacterium tuberculosis	1773	PRJNA271051	271051	Terrabacteria group	Actinobacteria	4.33487	65.5	-	JXAW02	137	4282	4053	1/30/15	3/11/17	Contig	Vavilov Institute of General Genetics	SAMN03272559	GCA_000830545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/545/GCA_000830545.2_ASM83054v2	25953188	E186hv
"Salmonella enterica subsp. enterica serovar 4,12:i:-"	353569	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.03752	52.1	-	LHOM01	92	5218	4974	8/5/15	5/30/17	Contig	FDA	SAMN03894397	GCA_001247365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/365/GCA_001247365.1_Salmonella_enterica_CVM_N51306_v1.0	-	CVM N51306
Staphylococcus aureus F77710	1410905	PRJNA224536	224536	Terrabacteria group	Firmicutes	2.93126	32.8	-	JDNW01	29	3119	2945	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383825	GCA_000562815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/815/GCA_000562815.1_Stap_aure_F77710_V1	-	F77710
Staphylococcus aureus H48052	1410906	PRJNA224537	224537	Terrabacteria group	Firmicutes	2.72181	32.8	-	JDNX01	53	2821	2625	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383826	GCA_000562835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/835/GCA_000562835.1_Stap_aure_H48052_V1	-	H48052
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.80828	52.1	-	LHOO01	50	4948	4700	8/5/15	2/28/17	Contig	FDA	SAMN03894399	GCA_001247375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/375/GCA_001247375.1_Salmonella_enterica_CVM_N51308_v1.0	-	CVM N51308
Mycobacterium tuberculosis	1773	PRJNA276274	276274	Terrabacteria group	Actinobacteria	4.2948	65.5	-	JZDR01	158	4303	4042	4/15/15	3/10/17	Contig	Trinity College Dublin	SAMN03372109	GCA_000972185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/185/GCA_000972185.1_ASM97218v1	25999550	NZ3DS1
Escherichia coli TW07793	869693	PRJNA51133	51133	Proteobacteria	Gammaproteobacteria	4.64392	50.7	-	AFAG02	8	4811	4494	3/29/11	2/22/17	Contig	E. coli Reference Center	SAMN00116811	GCA_000194685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/685/GCA_000194685.2_ASM19468v2	-	TW07793
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05115	39.6	-	CHBV02	106	2241	2048	4/21/15	3/11/17	Contig	SC	SAMEA1463033	GCA_001301175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/175/GCA_001301175.2_7622_4_17	-	LE4040
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.30337	57.4	-	JWGK01	171	5212	5028	7/10/15	2/25/17	Scaffold	University of Washington	SAMN03196972	GCA_001061725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/725/GCA_001061725.1_ASM106172v1	26230489	1010_KPNE
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.14484	66.6	-	FRTW01	220	5917	5499	12/9/16	3/21/17	Contig	DTU	SAMEA2357632	GCA_900147515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/515/GCA_900147515.1_425	-	-
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	4.00173	38.9	-	LXUE01	293	4082	3691	6/30/17	7/3/17	Contig	Umm Al-Qura University	SAMN04924799	GCA_002212105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/105/GCA_002212105.1_ASM221210v1	-	AB552
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.52777	39.7	-	LXTZ01	775	3616	3170	6/30/17	7/3/17	Contig	Umm Al-Qura University	SAMN04924790	GCA_002212115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/115/GCA_002212115.1_ASM221211v1	-	AB417
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.14479	66.6	-	FRTR01	225	5927	5493	12/9/16	3/21/17	Contig	DTU	SAMEA2357637	GCA_900147525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/525/GCA_900147525.1_429	-	-
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.47682	57.3	-	JWER01	231	5457	5249	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197017	GCA_001061805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/805/GCA_001061805.1_ASM106180v1	26230489	1050_SSON
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00707	39.7	-	CFLV02	116	2181	1977	3/15/15	3/11/17	Contig	SC	SAMEA1463038	GCA_001301195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/195/GCA_001301195.2_7622_4_7	-	LE4005
Escherichia coli B41	869694	PRJNA51135	51135	Proteobacteria	Gammaproteobacteria	5.01161	50.7	-	AFAH02	5	5237	4803	3/29/11	2/22/17	Contig	E. coli Reference Center	SAMN02436334	GCA_000194705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/705/GCA_000194705.2_ASM19470v2	-	B41
Mycobacterium tuberculosis	1773	PRJNA272470	272470	Terrabacteria group	Actinobacteria	4.33849	65.6	-	LATO01	192	4271	4064	4/15/15	3/11/17	Contig	Institute for Medical Research	SAMN03338743	GCA_000972425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/425/GCA_000972425.1_ASM97242v1	-	MTBR2/09
Salmonella enterica subsp. enterica serovar Senftenberg	28150	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.85093	52	-	LHOQ01	49	4924	4690	8/5/15	2/28/17	Contig	FDA	SAMN03894403	GCA_001247445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/445/GCA_001247445.1_Salmonella_enterica_CVM_N51312_v1.0	-	CVM N51312
Staphylococcus aureus H48054	1410907	PRJNA224538	224538	Terrabacteria group	Firmicutes	2.72185	32.8	-	JDNY01	58	2801	2628	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383827	GCA_000562855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/855/GCA_000562855.1_Stap_aure_H48054_V1	-	H48054
Staphylococcus aureus S39407	1410908	PRJNA224539	224539	Terrabacteria group	Firmicutes	2.92054	32.7	-	JDNZ01	25	3083	2944	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383828	GCA_000562875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/875/GCA_000562875.1_Stap_aure_S39407_V1	-	S39407
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.68731	52.1	-	LHOP01	47	4750	4529	8/5/15	2/28/17	Contig	FDA	SAMN03894402	GCA_001247455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/455/GCA_001247455.1_Salmonella_enterica_CVM_N51311_v1.0	-	CVM N51311
Mycobacterium tuberculosis	1773	PRJNA272470	272470	Terrabacteria group	Actinobacteria	4.34917	65.6	-	LATP01	167	4281	4084	4/15/15	3/10/17	Contig	Institute for Medical Research	SAMN03338744	GCA_000972445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/445/GCA_000972445.1_ASM97244v1	-	MTBR3/09
Escherichia coli 900105 (10e)	869695	PRJNA51137	51137	Proteobacteria	Gammaproteobacteria	5.56016	50.6	-	AFAI02	51	6082	5487	3/29/11	5/18/17	Contig	E. coli Reference Center	SAMN00116815	GCA_000194725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/194/725/GCA_000194725.2_ASM19472v2	-	900105 (10e)
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07157	39.6	-	CFIE02	159	2230	2036	3/15/15	3/11/17	Contig	SC	SAMEA1463043	GCA_001301215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/215/GCA_001301215.2_7553_6_3	-	PT8106
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.48451	57.2	-	JVWL01	409	5521	5165	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197231	GCA_001062535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/535/GCA_001062535.1_ASM106253v1	26230489	1263_KPNE
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.31765	66.5	-	FRTV01	176	6058	5761	12/9/16	3/21/17	Contig	DTU	SAMEA2357633	GCA_900147535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/535/GCA_900147535.1_426	-	-
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.83156	39.3	-	LXUB01	575	3926	3505	6/30/17	7/3/17	Contig	Umm Al-Qura University	SAMN04924800	GCA_002212145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/145/GCA_002212145.1_ASM221214v1	-	AB558
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.82942	39.3	-	LXUA01	782	3930	3508	6/30/17	7/3/17	Contig	Umm Al-Qura University	SAMN04924792	GCA_002212155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/155/GCA_002212155.1_ASM221215v1	-	AB462
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.29304	66.5	-	FRTT01	186	6072	5800	12/9/16	3/21/17	Contig	DTU	SAMEA2357634	GCA_900147555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/555/GCA_900147555.1_427	-	-
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.24266	57.4	-	JVQM01	98	5178	4997	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197386	GCA_001062915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/915/GCA_001062915.1_ASM106291v1	26230489	194_KPNE
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04237	39.6	-	CFRS02	138	2214	2003	3/15/15	3/6/17	Contig	SC	SAMEA1463054	GCA_001301235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/235/GCA_001301235.2_7553_5_92	-	PT8086
Escherichia coli NA114	1033813	PRJNA66975	66975	Proteobacteria	Gammaproteobacteria	5.24618	50.8	-	MIPU01	105	5547	5191	11/28/16	2/25/17	Contig	"Pathogen Biology Laboratory, Department of Biotechnology, University of Hyderabad"	SAMN02603711	GCA_000214765.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/765/GCA_000214765.3_ASM21476v3	21685291	NA114
Mycobacterium tuberculosis	1773	PRJNA272470	272470	Terrabacteria group	Actinobacteria	4.35828	65.6	-	LATN01	203	4313	4069	4/15/15	3/10/17	Contig	Institute for Medical Research	SAMN03338742	GCA_000972465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/465/GCA_000972465.1_ASM97246v1	-	MTBR1/09
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91203	52	-	LHOR01	72	4983	4688	8/5/15	2/28/17	Contig	FDA	SAMN03894404	GCA_001247465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/465/GCA_001247465.1_Salmonella_enterica_CVM_N51313_v1.0	-	CVM N51313
Staphylococcus aureus F81035	1410911	PRJNA224542	224542	Terrabacteria group	Firmicutes	2.87323	32.9	-	JDOA01	2	2990	2825	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383831	GCA_000562895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/895/GCA_000562895.1_Stap_aure_F81035_V1	-	F81035
Staphylococcus aureus T12805	1410912	PRJNA224543	224543	Terrabacteria group	Firmicutes	2.89023	32.6	-	JDOB01	39	3037	2896	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383832	GCA_000562915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/915/GCA_000562915.1_Stap_aure_T12805_V1	-	T12805
Salmonella enterica subsp. enterica serovar Mbandaka	192954	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.74555	52.1	-	LHOS01	51	4845	4589	8/5/15	2/28/17	Contig	FDA	SAMN03894406	GCA_001247475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/475/GCA_001247475.1_Salmonella_enterica_CVM_N51315_v1.0	-	CVM N51315
Mycobacterium tuberculosis	1773	PRJNA280727	280727	Terrabacteria group	Actinobacteria	4.32982	65.5	-	LAVG01	139	4287	4031	4/28/15	3/11/17	Contig	Vavilov Institute of General Genetics	SAMN03460429	GCA_000981265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/265/GCA_000981265.1_ASM98126v1	26139726	13-4152
Escherichia coli 5.0588	869671	PRJNA51089	51089	Proteobacteria	Gammaproteobacteria	5.00398	50.8	-	AEZK02	31	5234	4801	5/25/11	5/18/17	Contig	E. coli Reference Center	SAMN02436554	GCA_000215145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/145/GCA_000215145.2_ASM21514v2	-	5.0588
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05621	39.6	-	CFKD02	152	2200	2008	3/15/15	3/5/17	Contig	SC	SAMEA1463056	GCA_001301255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/255/GCA_001301255.2_7622_4_6	-	LE4000
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.49968	57.2	-	JVER01	113	5398	5202	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197693	GCA_001063525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/525/GCA_001063525.1_ASM106352v1	26230489	500_KPNE
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.32279	66.5	-	FRTU01	186	6070	5756	12/9/16	3/21/17	Contig	DTU	SAMEA2357638	GCA_900147565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/565/GCA_900147565.1_430	-	-
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	4.20842	38.9	-	LXTY01	244	4252	3944	6/30/17	7/3/17	Contig	Umm Al-Qura University	SAMN04924783	GCA_002212165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/165/GCA_002212165.1_ASM221216v1	-	AB309
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.84266	39.3	-	LYNM01	466	3958	3576	6/30/17	7/3/17	Contig	Umm Al-Qura University	SAMN04924787	GCA_002212225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/225/GCA_002212225.1_ASM221222v1	-	AB363
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.29882	66.4	-	FRUB01	323	6129	5753	12/9/16	3/21/17	Contig	DTU	SAMEA2357639	GCA_900147575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/575/GCA_900147575.1_431	-	-
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.79155	56.9	-	JVBQ01	144	5885	5547	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197772	GCA_001063755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/755/GCA_001063755.1_ASM106375v1	26230489	570_KPNE
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07598	39.6	-	CIKC02	133	2275	2044	4/21/15	3/15/17	Contig	SC	SAMEA1463065	GCA_001301275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/275/GCA_001301275.2_7622_2_29	-	BR1085
Escherichia coli 96.0497	869677	PRJNA51101	51101	Proteobacteria	Gammaproteobacteria	5.01426	50.8	-	AEZQ02	13	5198	4862	5/25/11	5/18/17	Contig	E. coli Reference Center	SAMN02436633	GCA_000215185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/185/GCA_000215185.2_ASM21518v2	-	96.0497
Mycobacterium tuberculosis	1773	PRJNA282588	282588	Terrabacteria group	Actinobacteria	4.32768	65.5	-	LDNL01	153	4291	4035	6/2/15	3/11/17	Contig	Vavilov Institute of General Genetics	SAMN03496755	GCA_001017695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/695/GCA_001017695.1_ASM101769v1	26139726	13-2459
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.84965	52	-	LHOT01	67	4918	4636	8/5/15	2/28/17	Contig	FDA	SAMN03894407	GCA_001247535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/535/GCA_001247535.1_Salmonella_enterica_CVM_N51981_v1.0	-	CVM N51981
Staphylococcus aureus T12818	1410913	PRJNA224544	224544	Terrabacteria group	Firmicutes	2.8971	32.7	-	JDOC01	37	3043	2902	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383833	GCA_000562935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/935/GCA_000562935.1_Stap_aure_T12818_V1	-	T12818
Staphylococcus aureus S39411	1410914	PRJNA224545	224545	Terrabacteria group	Firmicutes	2.92856	32.8	-	JDOD01	26	3109	2941	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383834	GCA_000562955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/955/GCA_000562955.1_Stap_aure_S39411_V1	-	S39411
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91038	52	-	LHOU01	69	4973	4687	8/5/15	2/28/17	Contig	FDA	SAMN03894408	GCA_001247545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/545/GCA_001247545.1_Salmonella_enterica_CVM_N51982_v1.0	-	CVM N51982
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36534	65.6	-	CPZQ01	111	4291	4080	3/23/15	3/10/17	Contig	SC	SAMEA1523381	GCA_001083565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/565/GCA_001083565.1_8080_8_11	-	200541
Escherichia coli 3.2608	869679	PRJNA51105	51105	Proteobacteria	Gammaproteobacteria	5.45044	50.6	-	AEZS02	22	5852	5401	5/25/11	5/18/17	Contig	E. coli Reference Center	SAMN02436332	GCA_000215205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/205/GCA_000215205.2_ASM21520v2	-	3.2608
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06435	39.6	-	CHXJ02	141	2260	2056	4/21/15	3/5/17	Contig	SC	SAMEA1463071	GCA_001301295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/295/GCA_001301295.2_7553_6_5	-	PT8114
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.08328	57.6	-	JVQU01	112	4987	4846	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197378	GCA_001063935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/935/GCA_001063935.1_ASM106393v1	26230489	187_KPNE
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.16416	66.6	-	FRUA01	157	5906	5527	12/9/16	3/21/17	Contig	DTU	SAMEA2357640	GCA_900147585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/585/GCA_900147585.1_432	-	-
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.53661	39.6	-	LXUD01	770	3624	3160	6/30/17	7/3/17	Contig	Umm Al-Qura University	SAMN04924812	GCA_002212235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/235/GCA_002212235.1_ASM221223v1	-	ABNH7
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.80555	39	-	LYNO01	136	3777	3545	6/30/17	7/3/17	Contig	Umm Al-Qura University	SAMN04924789	GCA_002212245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/245/GCA_002212245.1_ASM221224v1	-	AB393
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.16123	66.6	-	FRTX01	168	5914	5544	12/9/16	3/21/17	Contig	DTU	SAMEA2357641	GCA_900147595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/595/GCA_900147595.1_433	-	-
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.50291	57.1	-	JVPK01	133	5451	5202	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197414	GCA_001064035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/035/GCA_001064035.1_ASM106403v1	26230489	221_KPNE
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09484	39.6	-	CFRI02	164	2270	2058	3/15/15	3/5/17	Contig	SC	SAMEA1463074	GCA_001301315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/315/GCA_001301315.2_7622_4_5	-	GL3080
Escherichia coli 93.0624	869680	PRJNA51107	51107	Proteobacteria	Gammaproteobacteria	5.27913	50.7	-	AEZT02	49	5608	5168	5/25/11	2/22/17	Contig	E. coli Reference Center	SAMN02436473	GCA_000215225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/225/GCA_000215225.2_ASM21522v2	-	93.0624
Mycobacterium tuberculosis	1773	PRJNA289028	289028	Terrabacteria group	Actinobacteria	4.36576	65.5	-	LGAX01	180	4289	4119	7/17/15	3/10/17	Contig	National Center for Genetic Engineering and Biotechnology	SAMN03840761	GCA_001086825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/825/GCA_001086825.1_ASM108682v1	26586896	MT433
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.07684	51.8	-	LHOW01	70	5219	4958	8/5/15	2/28/17	Contig	FDA	SAMN03894410	GCA_001247585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/585/GCA_001247585.1_Salmonella_enterica_CVM_N51984_v1.0	-	CVM N51984
Staphylococcus aureus T16117	1410915	PRJNA224546	224546	Terrabacteria group	Firmicutes	2.82219	32.8	-	JDOE01	42	2944	2817	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383835	GCA_000562975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/975/GCA_000562975.1_Stap_aure_T16117_V1	-	T16117
Staphylococcus aureus F19383	1411510	PRJNA224590	224590	Terrabacteria group	Firmicutes	2.87448	32.8	-	JDOF01	28	3017	2878	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384056	GCA_000562995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/562/995/GCA_000562995.1_Stap_aure_F19383_V1	-	F19383
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.79106	52.1	-	LHOV01	50	4908	4673	8/5/15	2/28/17	Contig	FDA	SAMN03894409	GCA_001247595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/247/595/GCA_001247595.1_Salmonella_enterica_CVM_N51983_v1.0	-	CVM N51983
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.37303	65.6	-	CQED01	66	4289	4106	3/23/15	3/10/17	Contig	SC	SAMEA1523389	GCA_001088665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/665/GCA_001088665.1_9278_1_8	-	200253
Escherichia coli 96.154	869683	PRJNA51113	51113	Proteobacteria	Gammaproteobacteria	4.95438	50.7	-	AEZW02	3	5141	4815	5/25/11	2/22/17	Contig	E. coli Reference Center	SAMN02436333	GCA_000215245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/245/GCA_000215245.2_ASM21524v2	-	96.154
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12957	39.6	-	CFIT02	236	2318	2096	3/15/15	3/5/17	Contig	SC	SAMEA1463079	GCA_001301335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/335/GCA_001301335.2_7553_5_58	-	NP7112
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.54202	57.3	-	JVHD01	86	5509	5288	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197629	GCA_001064955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/955/GCA_001064955.1_ASM106495v1	26230489	436_KPNE
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.30151	66.5	-	FRUC01	286	6109	5765	12/9/16	3/21/17	Contig	DTU	SAMEA2357642	GCA_900147605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/605/GCA_900147605.1_434	-	-
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	4.02536	38.8	-	LYNQ01	148	4020	3795	6/30/17	7/3/17	Contig	Umm Al-Qura University	SAMN04924793	GCA_002212285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/285/GCA_002212285.1_ASM221228v1	-	AB466
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.77295	39.3	-	LYNU01	523	3736	3486	6/30/17	7/3/17	Contig	Umm Al-Qura University	SAMN04924798	GCA_002212305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/305/GCA_002212305.1_ASM221230v1	-	AB543
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.13158	66.6	-	FRUD01	258	5943	5488	12/9/16	3/21/17	Contig	DTU	SAMEA2357643	GCA_900147615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/615/GCA_900147615.1_435	-	-
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.49101	57.3	-	JVEQ01	147	5407	5199	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197694	GCA_001065235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/235/GCA_001065235.1_ASM106523v1	26230489	501_KPNE
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00904	39.7	-	CFKA02	119	2181	1980	3/15/15	3/5/17	Contig	SC	SAMEA1463085	GCA_001301355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/355/GCA_001301355.2_7622_3_69	-	CH2091
Escherichia coli 9.0111	869686	PRJNA51119	51119	Proteobacteria	Gammaproteobacteria	5.72926	50.6	-	AEZZ02	90	6205	5539	5/25/11	8/8/17	Contig	E. coli Reference Center	SAMN02436553	GCA_000215265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/265/GCA_000215265.2_ASM21526v2	-	9.0111
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.35659	65.6	-	CQCC01	102	4289	4079	3/23/15	3/10/17	Contig	SC	SAMEA1317631	GCA_001094405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/405/GCA_001094405.1_7414_6_37	-	400968
Salmonella enterica subsp. enterica serovar Derby	28144	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.80892	52.1	-	LHJB01	74	4891	4638	8/5/15	2/28/17	Contig	FDA	SAMN03894235	GCA_001262435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/435/GCA_001262435.1_Salmonella_enterica_CVM_N46856_v1.0	-	CVM N46856
Staphylococcus aureus F22893	1411511	PRJNA224591	224591	Terrabacteria group	Firmicutes	2.82594	32.8	-	JDOG01	29	2957	2796	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384057	GCA_000563015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/015/GCA_000563015.1_Stap_aure_F22893_V1	-	F22893
Staphylococcus aureus F22898	1411512	PRJNA224592	224592	Terrabacteria group	Firmicutes	2.83287	32.7	-	JDOH01	28	2994	2829	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384058	GCA_000563035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/035/GCA_000563035.1_Stap_aure_F22898_V1	-	F22898
"Salmonella enterica subsp. enterica serovar 4,12:i:-"	353569	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.87467	52.2	-	LIMM01	72	5021	4781	8/20/15	5/30/17	Contig	FDA	SAMN03894086	GCA_001271395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/395/GCA_001271395.1_Salmonella_enterica_CVM_N43477_v1.0	-	CVM N43477
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36695	65.6	-	CQEE01	87	4299	4088	3/23/15	3/11/17	Contig	SC	SAMEA1523386	GCA_001097325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/325/GCA_001097325.1_8080_8_21	-	1300037
Escherichia coli 3.3884	869689	PRJNA51125	51125	Proteobacteria	Gammaproteobacteria	5.22501	50.8	-	AFAC02	13	5521	5118	5/25/11	2/22/17	Contig	E. coli Reference Center	SAMN02436475	GCA_000215285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/285/GCA_000215285.2_ASM21528v2	-	3.3884
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0621	39.6	-	CHXC02	156	2240	2014	4/21/15	3/11/17	Contig	SC	SAMEA1463092	GCA_001301395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/395/GCA_001301395.2_7553_5_94	-	PT8092
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.54139	56.9	-	JVMK01	157	5541	5251	7/10/15	2/21/17	Scaffold	University of Washington	SAMN03197492	GCA_001076675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/675/GCA_001076675.1_ASM107667v1	26230489	298_SBOY
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.29517	66.5	-	FRUE01	212	6105	5798	12/9/16	3/21/17	Contig	DTU	SAMEA2357644	GCA_900147625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/625/GCA_900147625.1_436	-	-
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.47494	39.6	-	LYNW01	542	3447	3187	6/30/17	7/3/17	Contig	Umm Al-Qura University	SAMN04924802	GCA_002212315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/315/GCA_002212315.1_ASM221231v1	-	AB576
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.85383	38.9	-	LYNR01	198	3842	3578	6/30/17	7/3/17	Contig	Umm Al-Qura University	SAMN04924794	GCA_002212325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/325/GCA_002212325.1_ASM221232v1	-	AB469
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.32054	66.5	-	FRUF01	215	6078	5786	12/9/16	3/21/17	Contig	DTU	SAMEA2357645	GCA_900147635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/635/GCA_900147635.1_437	-	-
Klebsiella pneumoniae	573	PRJEB7661	288866	Proteobacteria	Gammaproteobacteria	5.6948	57.1	-	CDFX01	178	5863	5582	7/2/15	2/21/17	Scaffold	UNIMI	SAMEA3108432	GCA_001182685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/685/GCA_001182685.1_KpVA-16	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.99985	39.7	-	CFJU02	211	2127	1952	3/15/15	3/11/17	Contig	SC	SAMEA1463094	GCA_001301415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/415/GCA_001301415.2_7553_5_57	-	NP7109
Escherichia coli O104:H4 str. TY-2482	1038844	PRJNA67657	67657	Proteobacteria	Gammaproteobacteria	5.29105	50.6	-	AFOG01	451	5591	5209	6/6/11	5/18/17	Contig	BGI	SAMN02469354	GCA_000217695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/695/GCA_000217695.2_ASM21769v2	-	TY-2482
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36611	65.6	-	CPWL01	103	4285	4091	3/23/15	3/10/17	Contig	SC	SAMEA1317657	GCA_001107145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/145/GCA_001107145.1_7414_6_44	-	302434
Salmonella enterica subsp. enterica serovar Bredeney	134047	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.69081	52.2	-	LIMK01	82	4768	4520	8/20/15	2/28/17	Contig	FDA	SAMN03894084	GCA_001271405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/405/GCA_001271405.1_Salmonella_enterica_CVM_N43475_v1.0	-	CVM N43475
Staphylococcus aureus F26088	1411513	PRJNA224593	224593	Terrabacteria group	Firmicutes	2.85963	33	-	JDOI01	1	2970	2824	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384059	GCA_000563055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/055/GCA_000563055.1_Stap_aure_F26088_V1	-	F26088
Staphylococcus aureus F32119	1411514	PRJNA224594	224594	Terrabacteria group	Firmicutes	2.77101	32.8	-	JDOJ01	54	2916	2742	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384060	GCA_000563075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/075/GCA_000563075.1_Stap_aure_F32119_V1	-	F32119
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.69523	52.1	-	LIMI01	91	4806	4550	8/20/15	2/28/17	Contig	FDA	SAMN03894077	GCA_001271415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/415/GCA_001271415.1_Salmonella_enterica_CVM_N43468_v1.0	-	CVM N43468
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36254	65.6	-	CPYP01	86	4269	4086	3/22/15	3/11/17	Contig	SC	SAMEA1523355	GCA_001111885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/885/GCA_001111885.1_8080_8_5	-	200135
Escherichia coli O104:H4 str. C227-11	1048254	PRJNA68253	68253	Proteobacteria	Gammaproteobacteria	5.54297	50.7	-	AFST01	37	5936	5067	7/15/11	8/8/17	Contig	PacBio	SAMN00744949	GCA_000220805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/805/GCA_000220805.2_Ecoli_C227-11_1.0	21793740	C227-11
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05507	39.6	-	CFIF02	135	2221	2020	3/15/15	3/11/17	Contig	SC	SAMEA1463095	GCA_001301435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/435/GCA_001301435.2_7622_5_50	-	MD5033
Klebsiella pneumoniae	573	PRJNA289048	289048	Proteobacteria	Gammaproteobacteria	5.66911	57.1	-	LGAB01	126	5782	5547	8/5/15	2/21/17	Scaffold	The University of Queensland	SAMN03840817	GCA_001238585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/585/GCA_001238585.1_ASM123858v1	-	ST258
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.1294	66.6	-	FRUG01	289	5954	5494	12/9/16	3/21/17	Contig	DTU	SAMEA2357647	GCA_900147645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/645/GCA_900147645.1_438	-	-
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.81803	39	-	LYNX01	146	3788	3547	6/30/17	7/3/17	Contig	Umm Al-Qura University	SAMN04924803	GCA_002212365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/365/GCA_002212365.1_ASM221236v1	-	AB578
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.5949	39.4	-	LYOB01	695	3726	3252	6/30/17	7/3/17	Contig	Umm Al-Qura University	SAMN04924807	GCA_002212385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/385/GCA_002212385.1_ASM221238v1	-	ABNH1
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.28127	66.4	-	FRUH01	371	6157	5694	12/9/16	3/21/17	Contig	DTU	SAMEA2357648	GCA_900147655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/655/GCA_900147655.1_439	-	-
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.39649	57.4	-	JUBG01	60	5395	5174	12/4/15	2/21/17	Scaffold	unverisity medical center groningen	SAMN03222863	GCA_001457255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/255/GCA_001457255.1_ASM145725v1	26617589	KPOI-1/1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05345	39.6	-	CHBW02	122	2258	2030	4/21/15	3/11/17	Contig	SC	SAMEA1463096	GCA_001301455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/455/GCA_001301455.2_7622_2_31	-	BR1090
Escherichia coli O104:H4 str. H112180282	1052677	PRJNA68661	68661	Proteobacteria	Gammaproteobacteria	5.36948	50.6	-	AFSO01	44	5723	5299	8/3/11	5/18/17	Contig	Health Protection Agency	SAMN02469876	GCA_000222505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/505/GCA_000222505.2_ASM22250v2	-	H112180282
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.35598	65.6	-	CPWU01	84	4266	4086	3/22/15	3/10/17	Contig	SC	SAMEA1523388	GCA_001114085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/085/GCA_001114085.1_8080_8_20	-	1200172
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.72579	52.1	-	LIMG01	120	4841	4584	8/20/15	2/28/17	Contig	FDA	SAMN03894073	GCA_001271425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/425/GCA_001271425.1_Salmonella_enterica_CVM_N43464_v1.0	-	CVM N43464
Staphylococcus aureus F35307	1411515	PRJNA224595	224595	Terrabacteria group	Firmicutes	2.81227	32.8	-	JDOK01	59	2924	2769	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384061	GCA_000563095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/095/GCA_000563095.1_Stap_aure_F35307_V1	-	F35307
Staphylococcus aureus F63154	1411516	PRJNA224596	224596	Terrabacteria group	Firmicutes	2.86287	32.8	-	JDOL01	27	2987	2861	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384062	GCA_000563115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/115/GCA_000563115.1_Stap_aure_F63154_V1	-	F63154
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.01977	51.7	-	LIMQ01	215	5117	4787	8/20/15	2/28/17	Contig	FDA	SAMN03894110	GCA_001271475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/475/GCA_001271475.1_Salmonella_enterica_CVM_N44693_v1.0	-	CVM N44693
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.38051	65.6	-	CPZO01	93	4294	4099	3/23/15	3/11/17	Contig	SC	SAMEA1317676	GCA_001116025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/025/GCA_001116025.1_7414_6_10	-	401787
Escherichia coli O104:H4 str. GOS1	1073985	PRJNA71263	71263	Proteobacteria	Gammaproteobacteria	5.31112	50.6	-	AFWO01	208	5648	5180	8/8/11	5/18/17	Contig	Goettingen Genomics Laboratory	SAMN02469824	GCA_000223015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/223/015/GCA_000223015.2_ASM22301v2	21713444	GOS1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12735	39.6	-	CHIQ02	226	2309	2093	4/21/15	3/11/17	Contig	SC	SAMEA1463097	GCA_001301475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/475/GCA_001301475.2_7553_5_56	-	NP7105
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.37636	57.4	-	JTKB01	128	5409	5106	12/4/15	2/21/17	Scaffold	unverisity medical center groningen	SAMN03222864	GCA_001457265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/265/GCA_001457265.1_ASM145726v1	26617589	KPOI-1/2
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.74821	66.2	-	FRUI01	244	6506	6223	12/9/16	3/21/17	Contig	DTU	SAMEA2357650	GCA_900147665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/665/GCA_900147665.1_440	-	-
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.5929	39.5	-	LYOC01	766	3728	3266	6/30/17	7/3/17	Contig	Umm Al-Qura University	SAMN04924808	GCA_002212405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/405/GCA_002212405.1_ASM221240v1	-	ABNH2
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.83273	39	-	LYOF01	333	3854	3532	6/30/17	7/3/17	Contig	Umm Al-Qura University	SAMN04924813	GCA_002212445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/445/GCA_002212445.1_ASM221244v1	-	ABNH8
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.61833	66.1	-	FRUJ01	447	6545	6079	12/9/16	3/20/17	Contig	DTU	SAMEA2357288	GCA_900147675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/675/GCA_900147675.1_1_2	-	-
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.39042	57.4	-	JTKD01	64	5405	5171	12/4/15	2/21/17	Scaffold	unverisity medical center groningen	SAMN03222865	GCA_001457275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/275/GCA_001457275.1_ASM145727v1	26617589	KPOI-1/3
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0969	39.5	-	CFRF02	204	2230	2019	3/15/15	3/11/17	Contig	SC	SAMEA1463102	GCA_001301495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/495/GCA_001301495.2_7622_2_32	-	BR1098
Escherichia coli O104:H4 str. GOS2	1073841	PRJNA71339	71339	Proteobacteria	Gammaproteobacteria	5.30882	50.6	-	AFWP01	243	5647	5177	8/8/11	5/18/17	Contig	Goettingen Genomics Laboratory	SAMN02469825	GCA_000223035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/223/035/GCA_000223035.2_ASM22303v2	21713444	GOS2
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.3602	65.6	-	CQAH01	106	4289	4082	3/23/15	3/11/17	Contig	SC	SAMEA1317646	GCA_001122345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/345/GCA_001122345.1_7414_6_6	-	400044
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.69768	52.1	-	LIMP01	37	4809	4560	8/20/15	2/28/17	Contig	FDA	SAMN03894106	GCA_001271485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/485/GCA_001271485.1_Salmonella_enterica_CVM_N43834_v1.0	-	CVM N43834
Staphylococcus aureus F63179	1411517	PRJNA224597	224597	Terrabacteria group	Firmicutes	2.78853	32.8	-	JDOM01	45	2886	2759	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384063	GCA_000563135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/135/GCA_000563135.1_Stap_aure_F63179_V1	-	F63179
Staphylococcus aureus F66300	1411518	PRJNA224598	224598	Terrabacteria group	Firmicutes	2.79102	32.8	-	JDON01	48	2905	2765	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384064	GCA_000563155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/155/GCA_000563155.1_Stap_aure_F66300_V1	-	F66300
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.72118	52.1	-	LIMS01	220	4870	4573	8/20/15	2/28/17	Contig	FDA	SAMN03894121	GCA_001271495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/495/GCA_001271495.1_Salmonella_enterica_CVM_N44704_v1.0	-	CVM N44704
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36488	65.6	-	CQAP01	84	4291	4102	3/22/15	3/11/17	Contig	SC	SAMEA1317669	GCA_001125785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/785/GCA_001125785.1_7414_6_8	-	402568
Escherichia coli XH001	1069495	PRJNA70787	70787	Proteobacteria	Gammaproteobacteria	4.83928	50.513	plasmid pVZ321-thrLABC:NZ_AFYG01000108.1/AFYG01000108.1	AFYG01	108	5044	4718	8/24/11	5/18/17	Contig	"School of Bioscience and Bioengineering, South China University of Technology"	SAMN02471003	GCA_000224395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/395/GCA_000224395.2_ASM22439v2	-	XH001
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08906	39.6	-	CHBU02	177	2291	2073	4/21/15	3/11/17	Contig	SC	SAMEA1463103	GCA_001301515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/515/GCA_001301515.2_7553_5_87	-	PT8074
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.22134	57.5	-	JUBL01	62	5240	5022	12/4/15	2/21/17	Scaffold	unverisity medical center groningen	SAMN03223203	GCA_001460505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/460/505/GCA_001460505.1_ASM146050v1	26617589	KP-11U
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.70607	66.1	-	FRUK01	306	6603	6256	12/9/16	3/20/17	Contig	DTU	SAMEA2357279	GCA_900147685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/685/GCA_900147685.1_11_2	-	-
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.97315	38.9	-	LYNI01	142	3904	3680	6/30/17	7/3/17	Contig	Umm Al-Qura University	SAMN04924782	GCA_002212465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/465/GCA_002212465.1_ASM221246v1	-	AB263
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.89378	39	-	LYNN01	286	3878	3577	6/30/17	7/3/17	Contig	Umm Al-Qura University	SAMN04924788	GCA_002212485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/485/GCA_002212485.1_ASM221248v1	-	AB388
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.43417	66.4	-	FRUL01	163	6151	5897	12/9/16	3/20/17	Contig	DTU	SAMEA2357294	GCA_900147695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/695/GCA_900147695.1_124_1	-	-
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.39886	57.4	-	JUBI01	64	5401	5172	12/4/15	2/21/17	Scaffold	unverisity medical center groningen	SAMN03223195	GCA_001460565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/460/565/GCA_001460565.1_ASM146056v1	26617589	KPOI-3
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05531	39.7	-	CHIR02	127	2249	2027	4/21/15	3/11/17	Contig	SC	SAMEA1463104	GCA_001301535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/535/GCA_001301535.2_7553_4_3	-	ND6115
Escherichia coli STEC_B2F1	754084	PRJNA48273	48273	Proteobacteria	Gammaproteobacteria	4.98941	50.9	-	AFDQ01	37	5217	4826	9/1/11	2/22/17	Contig	Institute for Genome Sciences	SAMN00015360	GCA_000225025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/025/GCA_000225025.2_ASM22502v2	-	STEC_B2F1
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36669	65.6	-	CPVZ01	90	4296	4087	3/22/15	3/11/17	Contig	SC	SAMEA1523376	GCA_001131785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/785/GCA_001131785.1_8080_8_18	-	201127
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.9506	52.1	-	LIMU01	76	5054	4809	8/20/15	2/28/17	Contig	FDA	SAMN03894135	GCA_001271505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/505/GCA_001271505.1_Salmonella_enterica_CVM_N45390_v1.0	-	CVM N45390
Staphylococcus aureus F66307	1411519	PRJNA224599	224599	Terrabacteria group	Firmicutes	2.81088	32.8	-	JDOO01	51	2913	2769	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384065	GCA_000563175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/175/GCA_000563175.1_Stap_aure_F66307_V1	-	F66307
Staphylococcus aureus F74220	1411520	PRJNA224600	224600	Terrabacteria group	Firmicutes	2.87323	32.8	-	JDOP01	2	3025	2873	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384066	GCA_000563195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/195/GCA_000563195.1_Stap_aure_F74220_V1	-	F74220
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.87412	52.1	-	LIMW01	81	5008	4767	8/20/15	2/28/17	Contig	FDA	SAMN03894138	GCA_001271555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/555/GCA_001271555.1_Salmonella_enterica_CVM_N45393_v1.0	-	CVM N45393
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.3724	65.6	-	CQDK01	96	4275	4087	3/23/15	3/10/17	Contig	SC	SAMEA1317654	GCA_001133985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/985/GCA_001133985.1_7414_6_30	-	400554
Escherichia coli STEC_C165-02	754085	PRJNA48275	48275	Proteobacteria	Gammaproteobacteria	5.00927	50.6	-	AFDR01	30	5154	4808	9/1/11	2/22/17	Contig	Institute for Genome Sciences	SAMN00015368	GCA_000225045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/045/GCA_000225045.2_ASM22504v2	-	STEC_C165-02
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0723	39.5	-	CFIR02	119	2234	2034	3/15/15	3/11/17	Contig	SC	SAMEA1463121	GCA_001301555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/555/GCA_001301555.2_7553_4_5	-	ND6117
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.4721	57.3	-	JUBM01	89	5511	5242	12/4/15	2/21/17	Scaffold	unverisity medical center groningen	SAMN03223281	GCA_001460575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/460/575/GCA_001460575.1_ASM146057v1	26617589	KP-54M
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.39109	66.3	-	FRUN01	312	6231	5871	12/9/16	3/20/17	Contig	DTU	SAMEA2357297	GCA_900147705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/705/GCA_900147705.1_126_1	-	-
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.92146	38.9	-	LYOA01	181	3940	3672	6/30/17	7/3/17	Contig	Umm Al-Qura University	SAMN04924806	GCA_002212525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/525/GCA_002212525.1_ASM221252v1	-	AB601
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.53251	39.6	-	LYOD01	809	3630	3142	6/30/17	7/3/17	Contig	Umm Al-Qura University	SAMN04924810	GCA_002212535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/535/GCA_002212535.1_ASM221253v1	-	ABNH4
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.41005	66.3	-	FRUM01	256	6198	5884	12/9/16	3/20/17	Contig	DTU	SAMEA2357299	GCA_900147715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/715/GCA_900147715.1_127_1	-	-
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.38887	57.4	-	JUDT01	71	5394	5162	12/4/15	2/21/17	Scaffold	unverisity medical center groningen	SAMN03223200	GCA_001460985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/460/985/GCA_001460985.1_ASM146098v1	26617589	KPOI-4
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05593	39.6	-	CFLT02	144	2198	1981	3/15/15	3/11/17	Contig	SC	SAMEA1463123	GCA_001301575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/575/GCA_001301575.2_7622_2_34	-	BR1104
Escherichia coli 2534-86	754079	PRJNA48251	48251	Proteobacteria	Gammaproteobacteria	5.29014	50.5	-	AFDS01	75	5755	5119	9/1/11	5/18/17	Contig	Institute for Genome Sciences	SAMN00016621	GCA_000225065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/065/GCA_000225065.2_ASM22506v2	-	2534-86
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.40507	65.6	-	CPWI01	108	4320	4102	3/23/15	3/10/17	Contig	SC	SAMEA1523363	GCA_001141705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/705/GCA_001141705.1_8080_8_31	-	1500524
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.06866	52.1	-	LIMV01	83	5225	4954	8/20/15	2/28/17	Contig	FDA	SAMN03894136	GCA_001271565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/565/GCA_001271565.1_Salmonella_enterica_CVM_N45391_v1.0	-	CVM N45391
Staphylococcus aureus F77930	1411521	PRJNA224601	224601	Terrabacteria group	Firmicutes	2.78095	32.8	-	JDOQ01	34	2889	2744	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384067	GCA_000563215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/215/GCA_000563215.1_Stap_aure_F77930_V1	-	F77930
Staphylococcus aureus H24637	1411522	PRJNA224602	224602	Terrabacteria group	Firmicutes	2.84007	32.8	-	JDOR01	66	2962	2826	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384068	GCA_000563235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/235/GCA_000563235.1_Stap_aure_H24637_V1	-	H24637
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.69807	52.1	-	LIMX01	50	4813	4561	8/20/15	2/28/17	Contig	FDA	SAMN03894152	GCA_001271575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/575/GCA_001271575.1_Salmonella_enterica_CVM_N45407_v1.0	-	CVM N45407
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.39617	65.6	-	CPYX01	86	4291	4082	3/22/15	3/11/17	Contig	SC	SAMEA1523362	GCA_001145765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/765/GCA_001145765.1_8080_8_3	-	200353
Escherichia coli 3030-1	754080	PRJNA48253	48253	Proteobacteria	Gammaproteobacteria	5.25129	50.6	-	AFDT01	90	5595	4924	9/1/11	8/8/17	Contig	Institute for Genome Sciences	SAMN00016548	GCA_000225085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/085/GCA_000225085.2_ASM22508v2	-	3030-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.14035	39.7	-	CFQQ02	209	2263	1986	3/15/15	3/11/17	Contig	SC	SAMEA1463131	GCA_001301595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/595/GCA_001301595.2_7553_5_62	-	PT8000
Klebsiella pneumoniae	573	PRJNA285138	285138	Proteobacteria	Gammaproteobacteria	5.62298	56.8	-	LLJS01	122	5696	5390	12/24/15	2/21/17	Scaffold	Statens Serum Institut	SAMN03740593	GCA_001482605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/605/GCA_001482605.1_ASM148260v1	27873714	CPO-2015-0003
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.74234	66.1	-	FRUO01	226	6580	6290	12/9/16	3/20/17	Contig	DTU	SAMEA2357305	GCA_900147725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/725/GCA_900147725.1_13_1	-	-
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.76712	38.9	-	LYNK01	321	3856	3471	6/30/17	7/3/17	Contig	Umm Al-Qura University	SAMN04924785	GCA_002212565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/565/GCA_002212565.1_ASM221256v1	-	AB321
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.81286	39.2	-	LYNL01	228	3766	3553	6/30/17	7/3/17	Contig	Umm Al-Qura University	SAMN04924786	GCA_002212605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/605/GCA_002212605.1_ASM221260v1	-	AB354
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.29161	66.5	-	FRUP01	282	6132	5770	12/9/16	3/20/17	Contig	DTU	SAMEA2357314	GCA_900147745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/745/GCA_900147745.1_138_1	-	-
Klebsiella pneumoniae	573	PRJNA297498	297498	Proteobacteria	Gammaproteobacteria	5.45705	57.1	-	LLJP01	82	5440	5229	12/24/15	2/21/17	Scaffold	Statens Serum Institut	SAMN04124436	GCA_001482645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/645/GCA_001482645.1_ASM148264v1	-	AMA 782
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.99963	39.7	-	CFQY02	193	2117	1950	3/15/15	3/5/17	Contig	SC	SAMEA1463139	GCA_001301615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/615/GCA_001301615.2_7553_5_61	-	NP7122
Escherichia coli STEC_94C	754083	PRJNA48271	48271	Proteobacteria	Gammaproteobacteria	5.02913	50.7	-	AFDU01	37	5281	4626	9/1/11	8/8/17	Contig	Institute for Genome Sciences	SAMN00015357	GCA_000225105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/105/GCA_000225105.2_ASM22510v2	-	STEC_94C
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36041	65.6	-	CPXD01	118	4296	4076	3/23/15	3/11/17	Contig	SC	SAMEA1317647	GCA_001151565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/565/GCA_001151565.1_7414_6_47	-	300234
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.69753	52.1	-	LIMY01	60	4810	4554	8/20/15	2/28/17	Contig	FDA	SAMN03894154	GCA_001271615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/615/GCA_001271615.1_Salmonella_enterica_CVM_N45409_v1.0	-	CVM N45409
Staphylococcus aureus H24662	1411523	PRJNA224603	224603	Terrabacteria group	Firmicutes	2.85255	32.8	-	JDOS01	42	3001	2853	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384069	GCA_000563255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/255/GCA_000563255.1_Stap_aure_H24662_V1	-	H24662
Staphylococcus aureus H27858	1411524	PRJNA224604	224604	Terrabacteria group	Firmicutes	2.84094	32.9	-	JDOT01	51	2970	2801	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384070	GCA_000563275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/275/GCA_000563275.1_Stap_aure_H27858_V1	-	H27858
Salmonella enterica subsp. enterica serovar Johannesburg	913076	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.58465	52.2	-	LINA01	195	4691	4412	8/20/15	2/28/17	Contig	FDA	SAMN03894167	GCA_001271635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/635/GCA_001271635.1_Salmonella_enterica_CVM_N45933_v1.0	-	CVM N45933
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36351	65.6	-	CPVT01	100	4297	4085	3/22/15	3/11/17	Contig	SC	SAMEA1317621	GCA_001152945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/945/GCA_001152945.1_7414_6_57	-	301092
Escherichia coli STEC_DG131-3	754086	PRJNA48277	48277	Proteobacteria	Gammaproteobacteria	5.29803	50.6	-	AFDV01	66	5603	4910	9/1/11	8/8/17	Contig	Institute for Genome Sciences	SAMN00015373	GCA_000225125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/125/GCA_000225125.2_ASM22512v2	-	STEC_DG131-3
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08073	39.6	-	CHXF02	126	2273	2062	4/21/15	3/5/17	Contig	SC	SAMEA1463142	GCA_001301635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/635/GCA_001301635.2_7622_4_27	-	LE4083
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.64771	57.1	-	FBRI01	112	5790	5545	1/4/16	2/21/17	Scaffold	UMCG Groningen	SAMEA3515294	GCA_001511035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/035/GCA_001511035.1_ERS822443	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.73959	66.2	-	FRUR01	148	6515	6300	12/9/16	3/20/17	Contig	DTU	SAMEA2357320	GCA_900147755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/755/GCA_900147755.1_14_1	-	-
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.86572	39.1	-	LYNP01	693	3937	3566	6/30/17	7/3/17	Contig	Umm Al-Qura University	SAMN04924791	GCA_002212625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/625/GCA_002212625.1_ASM221262v1	-	AB432
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	4.10685	38.9	-	LYNS01	175	4112	3879	6/30/17	7/3/17	Contig	Umm Al-Qura University	SAMN04924795	GCA_002212635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/635/GCA_002212635.1_ASM221263v1	-	AB487
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.57764	66.2	-	FRUS01	256	6378	6078	12/9/16	3/20/17	Contig	DTU	SAMEA2357329	GCA_900147775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/775/GCA_900147775.1_149_1	-	-
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.65327	57.1	-	FBRB01	96	5802	5562	1/4/16	2/21/17	Scaffold	UMCG Groningen	SAMEA3515293	GCA_001511055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/055/GCA_001511055.1_ERS822442	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09236	39.6	-	CHXK02	147	2266	2064	4/21/15	3/5/17	Contig	SC	SAMEA1463143	GCA_001301655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/655/GCA_001301655.2_7622_5_55	-	MD5052
Escherichia coli STEC_EH250	754087	PRJNA48279	48279	Proteobacteria	Gammaproteobacteria	5.21177	50.8	-	AFDW01	41	5462	4956	9/1/11	2/22/17	Contig	Institute for Genome Sciences	SAMN00016950	GCA_000225145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/145/GCA_000225145.2_ASM22514v2	-	STEC_EH250
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36297	65.6	-	CQAS01	102	4292	4086	3/22/15	3/11/17	Contig	SC	SAMEA1317663	GCA_001156445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/445/GCA_001156445.1_7414_6_24	-	400491
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.86215	52.2	-	LINB01	63	4991	4762	8/20/15	2/28/17	Contig	FDA	SAMN03894190	GCA_001271645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/645/GCA_001271645.1_Salmonella_enterica_CVM_N46810_v1.0	-	CVM N46810
Staphylococcus aureus H27862	1411525	PRJNA224605	224605	Terrabacteria group	Firmicutes	2.91528	32.7	-	JDOU01	70	3062	2895	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384071	GCA_000563295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/295/GCA_000563295.1_Stap_aure_H27862_V1	-	H27862
Staphylococcus aureus H27872	1411526	PRJNA224606	224606	Terrabacteria group	Firmicutes	2.90539	32.7	-	JDOV01	67	3044	2896	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384072	GCA_000563315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/315/GCA_000563315.1_Stap_aure_H27872_V1	-	H27872
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.72878	52.1	-	LINC01	33	4835	4592	8/20/15	2/28/17	Contig	FDA	SAMN03894196	GCA_001271675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/675/GCA_001271675.1_Salmonella_enterica_CVM_N46817_v1.0	-	CVM N46817
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.39294	65.6	-	CQCH01	104	4308	4081	3/22/15	3/11/17	Contig	SC	SAMEA1523378	GCA_001159945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/945/GCA_001159945.1_8080_8_1	-	200105
Escherichia coli G58-1	754078	PRJNA48249	48249	Proteobacteria	Gammaproteobacteria	4.87053	50.7	-	AFDX01	107	5124	4555	9/1/11	5/18/17	Contig	Institute for Genome Sciences	SAMN00015374	GCA_000225165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/165/GCA_000225165.2_ASM22516v2	-	G58-1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06147	39.6	-	CFLY02	125	2237	2009	3/15/15	3/6/17	Contig	SC	SAMEA1463144	GCA_001301675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/675/GCA_001301675.2_7622_4_25	-	LE4079
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.53013	57.2	-	FBRQ01	83	5629	5416	1/4/16	2/21/17	Scaffold	UMCG Groningen	SAMEA3515298	GCA_001511095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/095/GCA_001511095.1_ERS822447	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.68211	66.1	-	FRUW01	395	6629	6231	12/9/16	3/20/17	Contig	DTU	SAMEA2357333	GCA_900147785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/785/GCA_900147785.1_15_2	-	-
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.87222	39	-	LYNT01	318	3949	3511	6/30/17	7/3/17	Contig	Umm Al-Qura University	SAMN04924796	GCA_002212645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/645/GCA_002212645.1_ASM221264v1	-	AB492
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.92933	39	-	LYNV01	184	3927	3668	6/30/17	7/3/17	Contig	Umm Al-Qura University	SAMN04924801	GCA_002212685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/685/GCA_002212685.1_ASM221268v1	-	AB559
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.59078	66.2	-	FRUU01	128	6287	6076	12/9/16	3/20/17	Contig	DTU	SAMEA2357344	GCA_900147795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/795/GCA_900147795.1_161_1	-	-
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.5872	57.1	-	FBSJ01	120	5733	5502	1/4/16	2/21/17	Scaffold	UMCG Groningen	SAMEA3515315	GCA_001511115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/115/GCA_001511115.1_ERS822464	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07204	39.6	-	CHXG02	146	2226	2025	4/21/15	3/5/17	Contig	SC	SAMEA1463150	GCA_001301695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/695/GCA_001301695.2_7622_5_66	-	MD5110
Escherichia coli STEC_H.1.8	754088	PRJNA48281	48281	Proteobacteria	Gammaproteobacteria	5.3886	50.6	-	AFDY01	75	5845	5085	9/1/11	8/8/17	Contig	Institute for Genome Sciences	SAMN00015143	GCA_000225185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/185/GCA_000225185.2_ASM22518v2	-	STEC_H.1.8
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.35911	65.6	-	CPXK01	115	4294	4081	3/23/15	3/11/17	Contig	SC	SAMEA1317671	GCA_001163485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/485/GCA_001163485.1_7414_6_59	-	401243
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.69262	52.1	-	LIND01	68	4817	4550	8/20/15	2/28/17	Contig	FDA	SAMN03894201	GCA_001271685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/685/GCA_001271685.1_Salmonella_enterica_CVM_N46822_v1.0	-	CVM N46822
Staphylococcus aureus H31276	1411527	PRJNA224607	224607	Terrabacteria group	Firmicutes	2.78012	32.8	-	JDOW01	35	2889	2758	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384073	GCA_000563335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/335/GCA_000563335.1_Stap_aure_H31276_V1	-	H31276
Staphylococcus aureus H31290	1411528	PRJNA224608	224608	Terrabacteria group	Firmicutes	2.87156	32.8	-	JDOX01	2	3021	2866	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384074	GCA_000563355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/355/GCA_000563355.1_Stap_aure_H31290_V1	-	H31290
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.93218	52.1	-	LINF01	102	5090	4830	8/20/15	2/28/17	Contig	FDA	SAMN03894207	GCA_001271715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/715/GCA_001271715.1_Salmonella_enterica_CVM_N46828_v1.0	-	CVM N46828
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.3949	65.6	-	CQCA01	74	4289	4076	3/23/15	3/11/17	Contig	SC	SAMEA1523356	GCA_001164225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/225/GCA_001164225.1_8080_8_4	-	201404
Escherichia coli STEC_MHI813	754089	PRJNA48285	48285	Proteobacteria	Gammaproteobacteria	5.23337	50.4	-	AFDZ01	30	5320	4973	9/1/11	2/22/17	Contig	Institute for Genome Sciences	SAMN00016450	GCA_000225205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/205/GCA_000225205.2_ASM22520v2	-	STEC_MHI813
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.98474	39.8	-	CIED02	153	2150	1925	4/21/15	3/15/17	Contig	SC	SAMEA1463153	GCA_001301715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/715/GCA_001301715.2_7553_4_8	-	ND6120
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.70002	57.1	-	FBSK01	143	5857	5569	1/4/16	2/21/17	Scaffold	UMCG Groningen	SAMEA3515313	GCA_001511135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/135/GCA_001511135.1_ERS822462	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.59352	66.2	-	FRUT01	170	6336	6086	12/9/16	3/20/17	Contig	DTU	SAMEA2357347	GCA_900147805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/805/GCA_900147805.1_163_1	-	-
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.8993	38.9	-	LYNZ01	216	3902	3585	6/30/17	7/3/17	Contig	Umm Al-Qura University	SAMN04924805	GCA_002212705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/705/GCA_002212705.1_ASM221270v1	-	AB596
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.89452	39	-	LYOG01	249	3892	3631	6/30/17	7/3/17	Contig	Umm Al-Qura University	SAMN05161791	GCA_002212715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/715/GCA_002212715.1_ASM221271v1	-	AB357
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.54049	66.4	-	FRUV01	92	6282	6100	12/9/16	3/20/17	Contig	DTU	SAMEA2357367	GCA_900147815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/815/GCA_900147815.1_180_1	-	-
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.58557	57.1	-	FBSP01	111	5732	5499	1/4/16	2/21/17	Scaffold	UMCG Groningen	SAMEA3515321	GCA_001511155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/155/GCA_001511155.1_ERS822470	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.04433	39.6	-	CHXE02	137	2211	2001	4/21/15	3/15/17	Contig	SC	SAMEA1463155	GCA_001301735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/735/GCA_001301735.2_7622_2_18	-	BR1055
Escherichia coli STEC_S1191	754090	PRJNA48287	48287	Proteobacteria	Gammaproteobacteria	5.14531	50.7	-	AFEA01	39	5452	4995	9/1/11	2/22/17	Contig	Institute for Genome Sciences	SAMN00016457	GCA_000225225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/225/GCA_000225225.2_ASM22522v2	-	STEC_S1191
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.35992	65.6	-	CPZK01	98	4286	4092	3/22/15	3/11/17	Contig	SC	SAMEA1317648	GCA_001166985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/985/GCA_001166985.1_7414_6_25	-	400541
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.69878	52.1	-	LINH01	103	4808	4548	8/20/15	2/28/17	Contig	FDA	SAMN03894218	GCA_001271735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/735/GCA_001271735.1_Salmonella_enterica_CVM_N46839_v1.0	-	CVM N46839
Staphylococcus aureus H34245	1411529	PRJNA224610	224610	Terrabacteria group	Firmicutes	2.83217	32.8	-	JDOY01	59	2948	2811	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384075	GCA_000563375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/375/GCA_000563375.1_Stap_aure_H34245_V1	-	H34245
Staphylococcus aureus H40569	1411531	PRJNA224612	224612	Terrabacteria group	Firmicutes	2.87147	32.8	-	JDOZ01	65	2997	2849	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384077	GCA_000563395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/395/GCA_000563395.1_Stap_aure_H40569_V1	-	H40569
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.00944	52.1	-	LINJ01	190	5152	4876	8/20/15	2/28/17	Contig	FDA	SAMN03894220	GCA_001271745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/745/GCA_001271745.1_Salmonella_enterica_CVM_N46841_v1.0	-	CVM N46841
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36455	65.6	-	CQEK01	108	4290	4087	3/22/15	3/11/17	Contig	SC	SAMEA1523383	GCA_001169565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/565/GCA_001169565.1_8080_8_27	-	1500283
Escherichia coli TX1999	670903	PRJNA40287	40287	Proteobacteria	Gammaproteobacteria	5.24937	50.6	-	AFEB01	93	5569	4927	9/1/11	8/8/17	Contig	Institute for Genome Sciences	SAMN00016962	GCA_000225245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/225/245/GCA_000225245.2_ASM22524v2	-	TX1999
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.10918	39.6	-	CIIN02	160	2292	2076	4/21/15	3/6/17	Contig	SC	SAMEA1463158	GCA_001301755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/755/GCA_001301755.2_7622_5_52	-	MD5037
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.58719	57.1	-	FBSG01	106	5728	5497	1/4/16	2/21/17	Scaffold	UMCG Groningen	SAMEA3515310	GCA_001511175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/175/GCA_001511175.1_ERS822459	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.73061	66.1	-	FRVA01	357	6570	6197	12/9/16	3/20/17	Contig	DTU	SAMEA2357413	GCA_900147825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/825/GCA_900147825.1_2_2	-	-
Acinetobacter baumannii	470	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.01999	38.9	-	NIUK01	47	3864	3718	8/2/17	8/4/17	Contig	JCVI	SAMN07203011	GCA_002239725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/725/GCA_002239725.1_ASM223972v1	-	SIUA6
Acinetobacter baumannii	470	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	3.97063	38.8	-	NIUM01	80	3896	3749	8/2/17	8/4/17	Contig	JCVI	SAMN07203009	GCA_002239735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/735/GCA_002239735.1_ASM223973v1	-	SIPA5
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.86132	65.9	-	FRUY01	133	6567	6354	12/9/16	3/20/17	Contig	DTU	SAMEA2357391	GCA_900147835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/835/GCA_900147835.1_201_1	-	-
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.41694	57.3	-	FBSW01	296	5666	5214	1/4/16	2/21/17	Scaffold	UMCG Groningen	SAMEA3515324	GCA_001511195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/195/GCA_001511195.1_ERS822473	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.16124	39.6	-	CHBX02	258	2368	2150	4/21/15	3/5/17	Contig	SC	SAMEA1463159	GCA_001301775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/775/GCA_001301775.2_7622_4_24	-	LE4073
Escherichia coli XH140A	1068608	PRJNA70725	70725	Proteobacteria	Gammaproteobacteria	4.41122	50.7939	plasmid pTHR:NZ_AFVX01000096.1/AFVX01000096.1	AFVX01	96	4568	4279	8/3/11	5/18/17	Contig	"School of Bioscience and Bioengineering, South China University of Technology"	SAMN02471004	GCA_000226585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/226/585/GCA_000226585.1_ASM22658v1	21994923	XH140A
Mycobacterium tuberculosis	1773	PRJNA288057	288057	Terrabacteria group	Actinobacteria	4.36192	65.5	-	LGCG01	173	4302	4071	7/20/15	3/11/17	Contig	Mahidol University	SAMN03793146	GCA_001183005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/005/GCA_001183005.1_ASM118300v1	27114869	46-5069
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.77243	52.1	-	LING01	59	4852	4624	8/20/15	2/28/17	Contig	FDA	SAMN03894210	GCA_001271755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/755/GCA_001271755.1_Salmonella_enterica_CVM_N46831_v1.0	-	CVM N46831
Staphylococcus aureus H40575	1411532	PRJNA224613	224613	Terrabacteria group	Firmicutes	2.88875	32.8	-	JDPA01	2	3028	2874	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384078	GCA_000563415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/415/GCA_000563415.1_Stap_aure_H40575_V1	-	H40575
Staphylococcus aureus H40583	1411533	PRJNA224614	224614	Terrabacteria group	Firmicutes	2.87487	32.8	-	JDPB01	2	3024	2866	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384079	GCA_000563435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/435/GCA_000563435.1_Stap_aure_H40583_V1	-	H40583
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.98521	52.1	-	LINK01	155	5114	4849	8/20/15	2/28/17	Contig	FDA	SAMN03894222	GCA_001271795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/795/GCA_001271795.1_Salmonella_enterica_CVM_N46843_v1.0	-	CVM N46843
Mycobacterium tuberculosis	1773	PRJNA288057	288057	Terrabacteria group	Actinobacteria	4.36899	65.6	-	LGCH01	159	4278	4061	7/20/15	3/11/17	Contig	Mahidol University	SAMN03793145	GCA_001183025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/025/GCA_001183025.1_ASM118302v1	27114869	CSF3053
Escherichia coli cloneA_i1	993513	PRJNA63489	63489	Proteobacteria	Gammaproteobacteria	4.75723	50.5	-	AEYT01	56	4967	4501	11/2/11	5/18/17	Contig	"TEDA School of Biological Sciences and Biotechnology, Nankai University, 23 Hongda Street, Tianjin 300457, China"	SAMN02471036	GCA_000233675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/675/GCA_000233675.2_ASM23367v2	22046404	cloneA_i1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09078	39.5	-	CFLO02	165	2298	2077	3/15/15	3/5/17	Contig	SC	SAMEA1463161	GCA_001301795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/795/GCA_001301795.2_7553_4_44	-	NP7062
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.62416	57.2	-	FBSU01	102	5726	5464	1/4/16	2/21/17	Scaffold	UMCG Groningen	SAMEA3515325	GCA_001511215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/215/GCA_001511215.1_ERS822474	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.80523	66	-	FRUZ01	153	6543	6316	12/9/16	3/20/17	Contig	DTU	SAMEA2357394	GCA_900147845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/845/GCA_900147845.1_203_1	-	-
Acinetobacter baumannii	470	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	3.93994	38.8	-	NIUL01	67	3833	3686	8/2/17	8/4/17	Contig	JCVI	SAMN07203010	GCA_002239865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/865/GCA_002239865.1_ASM223986v1	-	SIUA14
Acinetobacter baumannii	470	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	3.87935	38.9	-	NIUN01	92	3791	3625	8/2/17	8/4/17	Contig	JCVI	SAMN07203008	GCA_002239885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/885/GCA_002239885.1_ASM223988v1	-	SIPA14
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.41705	66.4	-	FRUX01	88	6108	5930	12/9/16	3/20/17	Contig	DTU	SAMEA2357431	GCA_900147855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/855/GCA_900147855.1_241_1	-	-
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.55457	57.2	-	FBRS01	114	5697	5454	1/4/16	2/21/17	Scaffold	UMCG Groningen	SAMEA3515305	GCA_001511275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/275/GCA_001511275.1_ERS822454	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00585	39.7	-	CFJT02	116	2182	1984	3/15/15	3/11/17	Contig	SC	SAMEA1463173	GCA_001301815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/815/GCA_001301815.2_7553_5_52	-	NP7095
Escherichia coli O157:H- str. 493-89	926027	PRJNA72247	72247	Proteobacteria	Gammaproteobacteria	5.35958	50.3	-	AGTG01	351	5774	5330	11/4/11	5/18/17	Contig	US FDA	SAMN02952921	GCA_000234215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/215/GCA_000234215.2_ASM23421v2	-	493-89
Mycobacterium tuberculosis	1773	PRJNA288057	288057	Terrabacteria group	Actinobacteria	4.36248	65.5	-	LGCF01	177	4290	4063	7/20/15	3/11/17	Contig	Mahidol University	SAMN03793151	GCA_001183035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/183/035/GCA_001183035.1_ASM118303v1	27114869	43-13838
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.95116	52.1	-	LINN01	77	5117	4819	8/20/15	2/28/17	Contig	FDA	SAMN03894242	GCA_001271815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/815/GCA_001271815.1_Salmonella_enterica_CVM_N47712_v1.0	-	CVM N47712
Staphylococcus aureus H57821	1411534	PRJNA224615	224615	Terrabacteria group	Firmicutes	2.84785	32.7	-	JDPC01	63	2976	2819	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384080	GCA_000563455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/455/GCA_000563455.1_Stap_aure_H57821_V1	-	H57821
Staphylococcus aureus H57822	1411535	PRJNA224616	224616	Terrabacteria group	Firmicutes	2.85763	32.7	-	JDPD01	64	2989	2828	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384081	GCA_000563475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/475/GCA_000563475.1_Stap_aure_H57822_V1	-	H57822
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.89201	52.1	-	LINM01	74	5000	4748	8/20/15	2/28/17	Contig	FDA	SAMN03894240	GCA_001271825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/825/GCA_001271825.1_Salmonella_enterica_CVM_N46861_v1.0	-	CVM N46861
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.29332	65.4	-	CRYW01	340	4394	4087	3/23/15	3/10/17	Contig	SC	SAMEA968147	GCA_001201115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/115/GCA_001201115.1_5319_2_4	-	N00800922
Escherichia coli O113:H21 str. CL-3	1078029	PRJNA72243	72243	Proteobacteria	Gammaproteobacteria	5.04821	50.7	-	AGTH01	258	5327	4956	11/4/11	5/18/17	Contig	US FDA	SAMN02952922	GCA_000234235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/235/GCA_000234235.2_ASM23423v2	-	CL-3
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09126	39.6	-	CFRH02	248	2237	2045	3/15/15	3/11/17	Contig	SC	SAMEA1463175	GCA_001301835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/835/GCA_001301835.2_7622_2_10	-	BR1025
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.49387	57.2	-	FBSF01	150	5622	5389	1/4/16	2/21/17	Scaffold	UMCG Groningen	SAMEA3515312	GCA_001511295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/295/GCA_001511295.1_ERS822461	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.79008	66.1	-	FRVB01	169	6514	6275	12/9/16	3/20/17	Contig	DTU	SAMEA2357447	GCA_900147865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/865/GCA_900147865.1_259_1	-	-
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.86277	39	-	LXNF01	196	3805	3561	8/4/17	8/6/17	Contig	Umm Al-Qura University	SAMN04924781	GCA_002241095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/095/GCA_002241095.1_ASM224109v1	-	AB254
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.88547	39	-	LXNE01	182	3853	3548	8/4/17	8/6/17	Contig	Umm Al-Qura University	SAMN04924780	GCA_002241105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/105/GCA_002241105.1_ASM224110v1	-	AB252
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.74748	66.1	-	FRVF01	238	6524	6229	12/9/16	3/21/17	Contig	DTU	SAMEA2357515	GCA_900147875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/875/GCA_900147875.1_3_2	-	-
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.66896	57.1	-	FBSS01	100	5791	5543	1/4/16	2/21/17	Scaffold	UMCG Groningen	SAMEA3515320	GCA_001511315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/315/GCA_001511315.1_ERS822469	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07961	39.6	-	CHWY02	343	2213	1985	4/21/15	3/11/17	Contig	SC	SAMEA1463183	GCA_001301855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/855/GCA_001301855.2_7553_5_49	-	NP7076
Escherichia coli O91:H21 str. B2F1	1078030	PRJNA72245	72245	Proteobacteria	Gammaproteobacteria	5.00474	50.7	-	AGTI01	232	5254	4901	11/4/11	2/23/17	Contig	US FDA	SAMN02952923	GCA_000234255.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/255/GCA_000234255.3_ASM23425v3	-	B2F1
Mycobacterium tuberculosis	1773	PRJNA290003	290003	Terrabacteria group	Actinobacteria	4.34655	65.5	-	LGTJ01	162	4321	4060	8/18/15	3/11/17	Contig	FIOCRUZ	SAMN03861514	GCA_001270365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/365/GCA_001270365.1_ASM127036v1	25841343	ZT272
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.93111	52.1	-	LINL01	131	5083	4823	8/20/15	2/28/17	Contig	FDA	SAMN03894227	GCA_001271835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/835/GCA_001271835.1_Salmonella_enterica_CVM_N46848-R_v1.0	-	CVM N46848
Staphylococcus aureus H57823	1411536	PRJNA224617	224617	Terrabacteria group	Firmicutes	2.8672	32.8	-	JDPE01	63	3029	2842	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384082	GCA_000563495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/495/GCA_000563495.1_Stap_aure_H57823_V1	-	H57823
Staphylococcus aureus H61003	1411537	PRJNA224618	224618	Terrabacteria group	Firmicutes	2.76824	32.8	-	JDPF01	48	2868	2728	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384083	GCA_000563515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/515/GCA_000563515.1_Stap_aure_H61003_V1	-	H61003
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.97745	51.8	-	LINO01	109	5029	4725	8/20/15	2/28/17	Contig	FDA	SAMN03894252	GCA_001271875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/875/GCA_001271875.1_Salmonella_enterica_CVM_N47722_v1.0	-	CVM N47722
Mycobacterium tuberculosis	1773	PRJNA273744	273744	Terrabacteria group	Actinobacteria	4.36282	65.6	-	JXXH01	70	4280	4054	8/18/15	3/11/17	Contig	FIOCRUZ	SAMN03295492	GCA_001270405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/405/GCA_001270405.1_ASM127040v1	26430044	Beijing
Escherichia coli O121:H19 str. MT#2	1078031	PRJNA72249	72249	Proteobacteria	Gammaproteobacteria	5.25083	50.4	-	AGTJ01	388	5645	5164	11/4/11	2/23/17	Contig	US FDA	SAMN02952924	GCA_000234275.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/275/GCA_000234275.3_ASM23427v3	-	MT#2
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.00882	39.7	-	CFRE02	118	2182	1982	3/15/15	3/11/17	Contig	SC	SAMEA1463189	GCA_001301875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/875/GCA_001301875.2_7622_4_19	-	LE4050
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.58865	57.2	-	FBRD01	118	5726	5495	1/4/16	2/21/17	Scaffold	UMCG Groningen	SAMEA3515295	GCA_001511355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/355/GCA_001511355.1_ERS822444	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.60911	66.4	-	FRVC01	123	6298	6112	12/9/16	3/21/17	Contig	DTU	SAMEA2357482	GCA_900147885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/885/GCA_900147885.1_29_1	-	-
Acinetobacter baumannii	470	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	3.98314	38.8	-	NQEQ01	78	3906	3753	8/11/17	8/15/17	Contig	JCVI	SAMN07450689	GCA_002249135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/135/GCA_002249135.1_ASM224913v1	-	ABCRPSTH03
Acinetobacter baumannii	470	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	3.95631	38.9	-	NQER01	89	3871	3721	8/11/17	8/15/17	Contig	JCVI	SAMN07450688	GCA_002249185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/185/GCA_002249185.1_ASM224918v1	-	ABCRPSTH04
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.67888	66.1	-	FRVE01	111	6429	6232	12/9/16	3/21/17	Contig	DTU	SAMEA2357503	GCA_900147895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/895/GCA_900147895.1_310_1	-	-
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.67707	57.2	-	FBSQ01	106	5799	5559	1/4/16	2/21/17	Scaffold	UMCG Groningen	SAMEA3515323	GCA_001511395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/395/GCA_001511395.1_ERS822472	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0631	39.5	-	CFJZ02	126	2250	2044	3/15/15	3/11/17	Contig	SC	SAMEA1463210	GCA_001301895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/895/GCA_001301895.2_7622_3_83	-	GL3024
Escherichia coli O45:H2 str. 03-EN-705	1078033	PRJNA72251	72251	Proteobacteria	Gammaproteobacteria	5.30219	50.6	-	AGTK01	433	5803	5351	11/4/11	5/18/17	Contig	US FDA	SAMN02952925	GCA_000234295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/295/GCA_000234295.2_ASM23429v2	-	03-EN-705
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.47689	65.4	-	LJIO01	308	4477	4225	9/15/15	3/11/17	Contig	Columbia University Mailman School of Public Health	SAMN03813789	GCA_001282455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/455/GCA_001282455.1_ASM128245v1	-	C28_9319
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.69469	52.1	-	LIMF01	39	4803	4554	8/20/15	2/28/17	Contig	FDA	SAMN03894060	GCA_001271895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/895/GCA_001271895.1_Salmonella_enterica_CVM_N43451_v1.0	-	CVM N43451
Staphylococcus aureus H64299	1411538	PRJNA224619	224619	Terrabacteria group	Firmicutes	2.82089	32.8	-	JDPG01	53	2947	2800	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384084	GCA_000563535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/535/GCA_000563535.1_Stap_aure_H64299_V1	-	H64299
Staphylococcus aureus H64303	1411539	PRJNA224620	224620	Terrabacteria group	Firmicutes	2.9035	32.7	-	JDPH01	31	3043	2914	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384085	GCA_000563555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/555/GCA_000563555.1_Stap_aure_H64303_V1	-	H64303
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.74281	52.1	-	LINP01	44	4866	4612	8/20/15	2/28/17	Contig	FDA	SAMN03894257	GCA_001271905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/905/GCA_001271905.1_Salmonella_enterica_CVM_N47727_v1.0	-	CVM N47727
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.29882	65.5	-	LJIL01	836	4431	4006	9/15/15	3/11/17	Contig	Columbia University Mailman School of Public Health	SAMN03813784	GCA_001282475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/475/GCA_001282475.1_ASM128247v1	-	BE_7556
Escherichia coli O145:H28 str. 4865/96	1078035	PRJNA72253	72253	Proteobacteria	Gammaproteobacteria	5.2259	50.5	-	AGTL01	345	5541	5088	11/4/11	5/18/17	Contig	US FDA	SAMN02952926	GCA_000234315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/315/GCA_000234315.2_ASM23431v2	-	4865/96
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.11799	39.6	-	CFKC02	173	2301	2101	3/15/15	3/11/17	Contig	SC	SAMEA1463213	GCA_001301915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/915/GCA_001301915.2_7622_3_84	-	GL3029
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.65296	57.1	-	FBSA01	107	5797	5553	1/4/16	2/21/17	Scaffold	UMCG Groningen	SAMEA3515296	GCA_001511415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/415/GCA_001511415.1_ERS822445	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.6801	66.1	-	FRVG01	120	6437	6230	12/9/16	3/21/17	Contig	DTU	SAMEA2357505	GCA_900147905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/905/GCA_900147905.1_311_1	-	-
Acinetobacter baumannii	470	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	3.88413	38.9	-	NQEU01	79	3785	3632	8/11/17	8/15/17	Contig	JCVI	SAMN07450685	GCA_002249225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/225/GCA_002249225.1_ASM224922v1	-	ABCRPSTH07
Acinetobacter baumannii	470	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	3.95666	38.9	-	NQES01	93	3876	3723	8/11/17	8/15/17	Contig	JCVI	SAMN07450687	GCA_002249245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/245/GCA_002249245.1_ASM224924v1	-	ABCRPSTH05
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.67841	66.1	-	FRVH01	119	6438	6231	12/9/16	3/21/17	Contig	DTU	SAMEA2357513	GCA_900147915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/915/GCA_900147915.1_318_1	-	-
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.65128	57.1	-	FBRG01	95	5796	5558	1/4/16	2/21/17	Scaffold	UMCG Groningen	SAMEA3515309	GCA_001511435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/435/GCA_001511435.1_ERS822458	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08752	39.6	-	CFIU02	172	2256	2057	3/15/15	3/11/17	Contig	SC	SAMEA1463217	GCA_001301935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/935/GCA_001301935.2_7553_4_35	-	NP7022
Escherichia coli O103:H25 str. NIPH-11060424	1101440	PRJNA74417	74417	Proteobacteria	Gammaproteobacteria	5.1599	50.4	-	AGSG01	491	5544	5077	11/7/11	5/18/17	Contig	NVH/NVI/NIPH/NOFIMA	SAMN02470714	GCA_000234605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/234/605/GCA_000234605.2_ASM23460v2	22403614	NIPH-11060424
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.35419	65.4	-	LJIM01	309	4359	4105	9/15/15	3/11/17	Contig	Columbia University Mailman School of Public Health	SAMN03813788	GCA_001282525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/525/GCA_001282525.1_ASM128252v1	-	C24_20545
"Salmonella enterica subsp. enterica serovar 4,12:i:-"	353569	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.86472	52.2	-	LIMH01	105	5025	4766	8/20/15	5/30/17	Contig	FDA	SAMN03894076	GCA_001271935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/935/GCA_001271935.1_Salmonella_enterica_CVM_N43467_v1.0	-	CVM N43467
Staphylococcus aureus H67656	1411540	PRJNA224621	224621	Terrabacteria group	Firmicutes	2.90264	32.8	-	JDPI01	73	3041	2886	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384086	GCA_000563575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/575/GCA_000563575.1_Stap_aure_H67656_V1	-	H67656
Staphylococcus aureus H70821	1411541	PRJNA224622	224622	Terrabacteria group	Firmicutes	2.87627	32.8	-	JDPJ01	2	3027	2867	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384087	GCA_000563595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/595/GCA_000563595.1_Stap_aure_H70821_V1	-	H70821
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.70531	52.1	-	LIML01	43	4811	4561	8/20/15	2/28/17	Contig	FDA	SAMN03894085	GCA_001271955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/955/GCA_001271955.1_Salmonella_enterica_CVM_N43476_v1.0	-	CVM N43476
Mycobacterium tuberculosis	1773	PRJNA291305	291305	Terrabacteria group	Actinobacteria	4.50508	65.6	-	LHCK01	5	4382	4168	10/16/15	3/11/17	Contig	National Health Research Institutes	SAMN03941250	GCA_001317365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/365/GCA_001317365.1_ASM131736v1	26659689	W06
Escherichia coli DEC1A	868133	PRJNA50903	50903	Proteobacteria	Gammaproteobacteria	5.10872	50.4	-	AIEV01	63	5477	4934	2/23/12	5/18/17	Contig	Institute for Genome Sciences	SAMN00191023	GCA_000249055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/055/GCA_000249055.2_ASM24905v2	22582382	DEC1A
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07479	39.6	-	CFRC02	134	2281	2076	3/15/15	3/11/17	Contig	SC	SAMEA1463218	GCA_001301955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/955/GCA_001301955.2_7622_3_82	-	GL3023
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.65722	57.1	-	FBSL01	116	5772	5522	1/4/16	2/21/17	Scaffold	UMCG Groningen	SAMEA3515318	GCA_001511455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/455/GCA_001511455.1_ERS822467	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.74572	66.1	-	FRVI01	225	6520	6229	12/9/16	3/21/17	Contig	DTU	SAMEA2357625	GCA_900147925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/925/GCA_900147925.1_4_2	-	-
Acinetobacter baumannii	470	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	3.95033	38.8	-	NQEW01	89	3886	3727	8/11/17	8/15/17	Contig	JCVI	SAMN07450683	GCA_002249255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/255/GCA_002249255.1_ASM224925v1	-	ABCRPSTH09
Acinetobacter baumannii	470	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	3.88582	38.9	-	NQET01	72	3780	3632	8/11/17	8/15/17	Contig	JCVI	SAMN07450686	GCA_002249265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/265/GCA_002249265.1_ASM224926v1	-	ABCRPSTH06
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	7.44718	65.2	-	FRVL01	419	7520	7101	12/9/16	3/21/17	Contig	DTU	SAMEA2357613	GCA_900147935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/935/GCA_900147935.1_410_1	-	-
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.55002	57.2	-	FBSV01	123	5691	5456	1/4/16	2/21/17	Scaffold	UMCG Groningen	SAMEA3515326	GCA_001511475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/475/GCA_001511475.1_ERS822475	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.02682	39.7	-	CFRB02	133	2188	1983	3/15/15	3/11/17	Contig	SC	SAMEA1463226	GCA_001301975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/975/GCA_001301975.2_7553_4_36	-	NP7026
Escherichia coli DEC1B	868134	PRJNA50905	50905	Proteobacteria	Gammaproteobacteria	5.19838	50.4	-	AIEW01	89	5637	4995	2/23/12	5/18/17	Contig	Institute for Genome Sciences	SAMN00191239	GCA_000249075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/075/GCA_000249075.2_ASM24907v2	22582382	DEC1B
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.30813	65.4	-	CGDP01	343	4398	4089	3/15/15	3/11/17	Contig	SC	SAMEA968181	GCA_001318885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/885/GCA_001318885.1_5319_2_3	-	N09901829
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.86578	52.2	-	LIMN01	67	4978	4741	8/20/15	2/28/17	Contig	FDA	SAMN03894097	GCA_001271965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/965/GCA_001271965.1_Salmonella_enterica_CVM_N43825_v1.0	-	CVM N43825
Staphylococcus aureus H70826	1411542	PRJNA224623	224623	Terrabacteria group	Firmicutes	2.85442	32.8	-	JDPK01	72	2991	2819	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384088	GCA_000563615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/615/GCA_000563615.1_Stap_aure_H70826_V1	-	H70826
Staphylococcus aureus H70834	1411543	PRJNA224624	224624	Terrabacteria group	Firmicutes	2.87357	32.7	-	JDPL01	68	3022	2851	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384089	GCA_000563635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/635/GCA_000563635.1_Stap_aure_H70834_V1	-	H70834
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.73034	52.1	-	LIMJ01	93	4847	4590	8/20/15	2/28/17	Contig	FDA	SAMN03894079	GCA_001271975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/271/975/GCA_001271975.1_Salmonella_enterica_CVM_N43470_v1.0	-	CVM N43470
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36893	65.6	-	CGGW01	90	4273	4095	3/15/15	3/11/17	Contig	SC	SAMEA1015936	GCA_001321745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/745/GCA_001321745.1_6954_8_55	-	1192X
Escherichia coli DEC1C	868135	PRJNA50907	50907	Proteobacteria	Gammaproteobacteria	5.27707	50.4	-	AIEX01	81	5701	5115	2/23/12	5/18/17	Contig	Institute for Genome Sciences	SAMN00191020	GCA_000249095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/095/GCA_000249095.2_ASM24909v2	22582382	DEC1C
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12205	39.6	-	CHIS02	152	2307	2110	4/21/15	3/5/17	Contig	SC	SAMEA1463228	GCA_001301995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/995/GCA_001301995.2_7553_4_15	-	ND6134
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.65387	57.1	-	FBRR01	109	5800	5555	1/4/16	2/21/17	Scaffold	UMCG Groningen	SAMEA3515302	GCA_001511495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/495/GCA_001511495.1_ERS822451	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.5718	66	-	FRVK01	366	6427	6062	12/9/16	3/21/17	Contig	DTU	SAMEA2357616	GCA_900147945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/945/GCA_900147945.1_412_1	-	-
Acinetobacter baumannii	470	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	3.89362	38.9	-	NQEX01	99	3813	3647	8/11/17	8/15/17	Contig	JCVI	SAMN07450598	GCA_002249305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/305/GCA_002249305.1_ASM224930v1	-	ABCRPSTH10
Acinetobacter baumannii	470	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	3.87727	38.9	-	NQEZ01	92	3789	3624	8/11/17	8/15/17	Contig	JCVI	SAMN07450596	GCA_002249325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/325/GCA_002249325.1_ASM224932v1	-	ABCRPSTH12
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.32126	66.5	-	FRVM01	196	6070	5758	12/9/16	3/21/17	Contig	DTU	SAMEA2357630	GCA_900147955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/955/GCA_900147955.1_423_1	-	-
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.50734	57.3	-	FBSO01	78	5594	5394	1/4/16	2/21/17	Scaffold	UMCG Groningen	SAMEA3515319	GCA_001511535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/535/GCA_001511535.1_ERS822468	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.03982	39.6	-	CFLU02	113	2236	2026	3/15/15	3/5/17	Contig	SC	SAMEA1463245	GCA_001302015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/015/GCA_001302015.2_7622_3_92	-	GL3049
Escherichia coli DEC1D	868136	PRJNA50909	50909	Proteobacteria	Gammaproteobacteria	5.15941	50.6	-	AIEY01	66	5587	5023	2/23/12	5/18/17	Contig	Institute for Genome Sciences	SAMN00191019	GCA_000249115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/115/GCA_000249115.2_ASM24911v2	22582382	DEC1D
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36536	65.6	-	CFSY01	114	4284	4075	3/15/15	3/11/17	Contig	SC	SAMEA1015962	GCA_001321925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/925/GCA_001321925.1_6954_7_30	-	0831E
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.69713	52.1	-	LIMO01	43	4808	4557	8/20/15	2/28/17	Contig	FDA	SAMN03894105	GCA_001272015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/015/GCA_001272015.1_Salmonella_enterica_CVM_N43833_v1.0	-	CVM N43833
Staphylococcus aureus H74056	1411544	PRJNA224625	224625	Terrabacteria group	Firmicutes	2.82908	32.8	-	JDPM01	64	2953	2807	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384090	GCA_000563655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/655/GCA_000563655.1_Stap_aure_H74056_V1	-	H74056
Staphylococcus aureus H77094	1411545	PRJNA224626	224626	Terrabacteria group	Firmicutes	2.92771	32.8	-	JDPN01	26	3117	2943	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384091	GCA_000563675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/675/GCA_000563675.1_Stap_aure_H77094_V1	-	H77094
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.93702	52.1	-	LIMZ01	86	5094	4834	8/20/15	2/28/17	Contig	FDA	SAMN03894155	GCA_001272035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/035/GCA_001272035.1_Salmonella_enterica_CVM_N45410_v1.0	-	CVM N45410
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36313	65.6	-	CHCB01	103	4287	4084	4/21/15	3/11/17	Contig	SC	SAMEA1016039	GCA_001322125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/125/GCA_001322125.1_6954_8_73	-	0372F
Escherichia coli DEC1E	868137	PRJNA50911	50911	Proteobacteria	Gammaproteobacteria	5.15392	50.5	-	AIEZ01	50	5552	4954	2/23/12	3/5/17	Contig	Institute for Genome Sciences	SAMN00191014	GCA_000249135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/135/GCA_000249135.2_ASM24913v2	22582382	DEC1E
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08296	39.5	-	CIDT02	148	2258	2039	4/21/15	3/6/17	Contig	SC	SAMEA1463249	GCA_001302035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/035/GCA_001302035.2_7553_5_72	-	PT8025
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.6744	57.2	-	FBSR01	94	5790	5561	1/4/16	2/21/17	Scaffold	UMCG Groningen	SAMEA3515322	GCA_001511555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/555/GCA_001511555.1_ERS822471	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.89332	66.1	-	FRVN01	242	6678	6414	12/9/16	3/21/17	Contig	DTU	SAMEA2357618	GCA_900147965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/965/GCA_900147965.1_413_1	-	-
Acinetobacter baumannii	470	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	3.94112	38.8	-	NQFA01	79	3848	3693	8/11/17	8/15/17	Contig	JCVI	SAMN07450595	GCA_002249335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/335/GCA_002249335.1_ASM224933v1	-	ABCRPUTH04
Acinetobacter baumannii	470	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	3.94373	38.9	-	NQFB01	98	3872	3678	8/11/17	8/15/17	Contig	JCVI	SAMN07450594	GCA_002249365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/365/GCA_002249365.1_ASM224936v1	-	ABCRPUTH05
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.17124	66.6	-	FRVJ01	104	5865	5548	12/9/16	3/21/17	Contig	DTU	SAMEA2357635	GCA_900147975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/975/GCA_900147975.1_427_1	-	-
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.65895	57.1	-	FBRX01	128	5811	5557	1/4/16	2/21/17	Scaffold	UMCG Groningen	SAMEA3515301	GCA_001511575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/575/GCA_001511575.1_ERS822450	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.08732	39.5	-	CHBT02	131	2267	2048	4/21/15	3/15/17	Contig	SC	SAMEA1463260	GCA_001302055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/055/GCA_001302055.2_7553_5_70	-	PT8019
Escherichia coli DEC2A	868138	PRJNA50913	50913	Proteobacteria	Gammaproteobacteria	5.09094	50.5	-	AIFA01	72	5482	4748	2/23/12	8/8/17	Contig	Institute for Genome Sciences	SAMN00115025	GCA_000249155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/155/GCA_000249155.2_ASM24915v2	22582382	DEC2A
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36626	65.6	-	CHXH01	108	4281	4073	4/21/15	3/11/17	Contig	SC	SAMEA1016042	GCA_001322145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/145/GCA_001322145.1_6954_1_56	-	0217M
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.95839	52.1	-	LIMT01	85	5076	4823	8/20/15	2/28/17	Contig	FDA	SAMN03894134	GCA_001272045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/045/GCA_001272045.1_Salmonella_enterica_CVM_N44717_v1.0	-	CVM N44717
Staphylococcus aureus H77098	1411546	PRJNA224627	224627	Terrabacteria group	Firmicutes	2.82107	32.8	-	JDPO01	49	2937	2788	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384092	GCA_000563695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/695/GCA_000563695.1_Stap_aure_H77098_V1	-	H77098
Staphylococcus aureus H77102	1411547	PRJNA224628	224628	Terrabacteria group	Firmicutes	2.78446	32.8	-	JDPP01	43	2892	2758	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384093	GCA_000563715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/715/GCA_000563715.1_Stap_aure_H77102_V1	-	H77102
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.75293	52.1	-	LIMR01	49	4838	4599	8/20/15	2/28/17	Contig	FDA	SAMN03894119	GCA_001272055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/055/GCA_001272055.1_Salmonella_enterica_CVM_N44702_v1.0	-	CVM N44702
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3599	65.6	-	CFTK01	96	4273	4082	3/15/15	3/11/17	Contig	SC	SAMEA1016075	GCA_001322265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/265/GCA_001322265.1_6954_8_74	-	0373G
Escherichia coli DEC2B	868139	PRJNA50915	50915	Proteobacteria	Gammaproteobacteria	5.13445	50.4	-	AFJB01	54	5499	4923	2/23/12	2/22/17	Contig	Institute for Genome Sciences	SAMN00191015	GCA_000249175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/175/GCA_000249175.2_ASM24917v2	-	DEC2B
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.12189	39.6	-	CFRL02	152	2344	2125	3/15/15	3/5/17	Contig	SC	SAMEA1463261	GCA_001302075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/075/GCA_001302075.2_7622_5_88	-	ND6059
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.70769	57.1	-	FBSH01	99	5841	5610	1/4/16	2/21/17	Scaffold	UMCG Groningen	SAMEA3515311	GCA_001511595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/595/GCA_001511595.1_ERS822460	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.32784	66.5	-	FRVO01	145	6040	5803	12/9/16	3/21/17	Contig	DTU	SAMEA2357646	GCA_900147985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/985/GCA_900147985.1_437_1	-	-
Acinetobacter baumannii	470	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	3.90906	38.9	-	NQFD01	97	3820	3654	8/11/17	8/15/17	Contig	JCVI	SAMN07450722	GCA_002249385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/385/GCA_002249385.1_ASM224938v1	-	ABCRPUTH07
Acinetobacter baumannii	470	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	3.97175	38.8	-	NQFF01	76	3895	3738	8/11/17	8/15/17	Contig	JCVI	SAMN07450720	GCA_002249405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/405/GCA_002249405.1_ASM224940v1	-	ABCRPUTH09
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.27632	66.5	-	FRVS01	299	6148	5773	12/9/16	3/21/17	Contig	DTU	SAMEA2357649	GCA_900147995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/995/GCA_900147995.1_439_1	-	-
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.54056	57.2	-	FBRU01	110	5688	5447	1/4/16	2/21/17	Scaffold	UMCG Groningen	SAMEA3515304	GCA_001511635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/635/GCA_001511635.1_ERS822453	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.0537	39.6	-	CHBP02	162	2227	2011	4/21/15	3/15/17	Contig	SC	SAMEA1463264	GCA_001302095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/095/GCA_001302095.2_7553_4_2	-	ND6111
Escherichia coli DEC2C	868140	PRJNA50917	50917	Proteobacteria	Gammaproteobacteria	5.29805	50.4	-	AIFB01	94	5770	5110	2/23/12	5/18/17	Contig	Institute for Genome Sciences	SAMN00116897	GCA_000249195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/195/GCA_000249195.2_ASM24919v2	22582382	DEC2C
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36099	65.6	-	CFSP01	100	4291	4077	3/15/15	3/11/17	Contig	SC	SAMEA1016103	GCA_001322345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/345/GCA_001322345.1_6954_7_4	-	0443H
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.96992	52.1	-	LINE01	101	5139	4866	8/20/15	2/28/17	Contig	FDA	SAMN03894205	GCA_001272095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/095/GCA_001272095.1_Salmonella_enterica_CVM_N46826_v1.0	-	CVM N46826
Staphylococcus aureus M16438	1411548	PRJNA224629	224629	Terrabacteria group	Firmicutes	2.7426	32.8	-	JDPQ01	41	2827	2688	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384094	GCA_000563735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/735/GCA_000563735.1_Stap_aure_M16438_V1	-	M16438
Staphylococcus aureus M28112	1411550	PRJNA224631	224631	Terrabacteria group	Firmicutes	2.88046	32.8	-	JDPR01	70	3036	2877	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384096	GCA_000563755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/755/GCA_000563755.1_Stap_aure_M28112_V1	-	M28112
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.93922	52.1	-	LINI01	279	5071	4821	8/20/15	2/28/17	Contig	FDA	SAMN03894219	GCA_001272115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/115/GCA_001272115.1_Salmonella_enterica_CVM_N46840_v1.0	-	CVM N46840
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36411	65.6	-	CFSX01	108	4292	4080	3/15/15	3/11/17	Contig	SC	SAMEA1016105	GCA_001322365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/365/GCA_001322365.1_6954_8_87	-	1474D
Escherichia coli DEC2D	868141	PRJNA50919	50919	Proteobacteria	Gammaproteobacteria	5.09472	50.4	-	AIFC01	45	5428	4875	2/23/12	5/18/17	Contig	Institute for Genome Sciences	SAMN00116898	GCA_000249215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/215/GCA_000249215.2_ASM24921v2	22582382	DEC2D
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	1.98662	39.8	-	CFQV02	149	2158	1936	3/15/15	3/11/17	Contig	SC	SAMEA1463268	GCA_001302115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/115/GCA_001302115.2_7553_4_27	-	ND6158
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.64597	57.1	-	FBRC01	95	5790	5546	1/4/16	2/21/17	Scaffold	UMCG Groningen	SAMEA3515308	GCA_001511675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/675/GCA_001511675.1_ERS822457	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.37077	66.4	-	FRVP01	79	6032	5882	12/9/16	3/21/17	Contig	DTU	SAMEA2357658	GCA_900148005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/005/GCA_900148005.1_60_1	-	-
Acinetobacter baumannii	470	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	3.94287	38.8	-	NQFE01	72	3841	3692	8/11/17	8/15/17	Contig	JCVI	SAMN07450721	GCA_002249425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/425/GCA_002249425.1_ASM224942v1	-	ABCRPUTH08
Acinetobacter baumannii	470	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	3.93897	38.9	-	NQFG01	117	3889	3675	8/11/17	8/15/17	Contig	JCVI	SAMN07450719	GCA_002249435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/435/GCA_002249435.1_ASM224943v1	-	ABCRPUTH10
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.56265	66.3	-	FRVT01	400	6450	6037	12/9/16	3/21/17	Contig	DTU	SAMEA2357661	GCA_900148015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/015/GCA_900148015.1_6_2	-	-
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.41598	57.3	-	FBSN01	89	5518	5314	1/4/16	2/21/17	Scaffold	UMCG Groningen	SAMEA3515316	GCA_001511695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/695/GCA_001511695.1_ERS822465	-	-
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.1204	39.5	-	CHIT02	165	2319	2115	4/21/15	3/11/17	Contig	SC	SAMEA1463271	GCA_001302135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/135/GCA_001302135.2_7622_2_2	-	BR1003
Escherichia coli DEC2E	868142	PRJNA50921	50921	Proteobacteria	Gammaproteobacteria	5.20568	50.5	-	AIFD01	77	5609	4979	2/23/12	5/18/17	Contig	Institute for Genome Sciences	SAMN00116899	GCA_000249235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/235/GCA_000249235.2_ASM24923v2	22582382	DEC2E
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36735	65.6	-	CFSO01	108	4288	4081	3/15/15	3/11/17	Contig	SC	SAMEA1016112	GCA_001322405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/405/GCA_001322405.1_6954_1_93	-	0053J
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.69173	52.1	-	LINQ01	78	4809	4551	8/20/15	2/28/17	Contig	FDA	SAMN03894268	GCA_001272125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/125/GCA_001272125.1_Salmonella_enterica_CVM_N48681_v1.0	-	CVM N48681
Staphylococcus aureus M31588	1411551	PRJNA224632	224632	Terrabacteria group	Firmicutes	2.92758	32.8	-	JDPS01	25	3090	2943	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384097	GCA_000563775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/775/GCA_000563775.1_Stap_aure_M31588_V1	-	M31588
Staphylococcus aureus M39841	1411552	PRJNA224633	224633	Terrabacteria group	Firmicutes	2.81438	32.8	-	JDPT01	46	2932	2797	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384098	GCA_000563795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/795/GCA_000563795.1_Stap_aure_M39841_V1	-	M39841
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.01802	51.7	-	LINR01	263	5083	4737	8/20/15	2/28/17	Contig	FDA	SAMN03894274	GCA_001272135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/135/GCA_001272135.1_Salmonella_enterica_CVM_N48687_v1.0	-	CVM N48687
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36121	65.6	-	CFTA01	106	4289	4076	3/15/15	3/11/17	Contig	SC	SAMEA1016122	GCA_001322425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/425/GCA_001322425.1_6954_8_88	-	1475E
Escherichia coli DEC3A	868143	PRJNA50923	50923	Proteobacteria	Gammaproteobacteria	5.44526	50.4	-	AIFE01	61	5827	5228	2/23/12	5/18/17	Contig	Institute for Genome Sciences	SAMN00191000	GCA_000249255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/255/GCA_000249255.2_ASM24925v2	22582382	DEC3A
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05347	39.6	-	CHWZ02	173	2187	1974	4/21/15	3/11/17	Contig	SC	SAMEA1463276	GCA_001302155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/155/GCA_001302155.2_7553_5_66	-	PT8011
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	5.59034	57.1	-	FBSM01	122	5736	5502	1/4/16	2/21/17	Scaffold	UMCG Groningen	SAMEA3515317	GCA_001511735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/735/GCA_001511735.1_ERS822466	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.65445	66.1	-	FRVU01	495	6681	6174	12/9/16	3/21/17	Contig	DTU	SAMEA2357667	GCA_900148025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/025/GCA_900148025.1_7_2	-	-
Acinetobacter baumannii	470	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	3.9403	38.8	-	NQFI01	73	3849	3697	8/11/17	8/15/17	Contig	JCVI	SAMN07450717	GCA_002249465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/465/GCA_002249465.1_ASM224946v1	-	ABCRPUTH12
Acinetobacter baumannii	470	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	3.85365	38.8	-	NQFJ01	106	3766	3600	8/11/17	8/15/17	Contig	JCVI	SAMN07450716	GCA_002249475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/475/GCA_002249475.1_ASM224947v1	-	ABCRPUTH13
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.4748	66.4	-	FRVQ01	166	6240	6003	12/9/16	3/21/17	Contig	DTU	SAMEA2357675	GCA_900148035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/035/GCA_900148035.1_81_1	-	-
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.58846	57.1	-	JTFV01	137	5744	5505	1/19/16	2/21/17	Scaffold	unverisity medical center groningen	SAMN03178225	GCA_001517725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/725/GCA_001517725.1_ASM151772v1	26067658	M098513
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05901	39.6	-	CHXL02	154	2218	2023	4/21/15	3/11/17	Contig	SC	SAMEA1463296	GCA_001302175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/175/GCA_001302175.2_7622_2_39	-	BR1112
Escherichia coli DEC3B	868144	PRJNA50925	50925	Proteobacteria	Gammaproteobacteria	5.50278	50.4	-	AIFF01	61	5930	5320	2/23/12	2/22/17	Contig	Institute for Genome Sciences	SAMN00190998	GCA_000249275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/275/GCA_000249275.2_ASM24927v2	22582382	DEC3B
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39746	65.6	-	CFTF01	103	4307	4122	3/15/15	3/11/17	Contig	SC	SAMEA1016130	GCA_001322485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/485/GCA_001322485.1_6954_1_79	-	0336R
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.72667	52.1	-	LINS01	140	4851	4588	8/20/15	2/28/17	Contig	FDA	SAMN03894289	GCA_001272175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/175/GCA_001272175.1_Salmonella_enterica_CVM_N48702_v1.0	-	CVM N48702
Staphylococcus aureus M59498	1411553	PRJNA224634	224634	Terrabacteria group	Firmicutes	2.86094	32.9	-	JDPU01	87	2990	2828	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384099	GCA_000563815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/815/GCA_000563815.1_Stap_aure_M59498_V1	-	M59498
Staphylococcus aureus M65003	1411554	PRJNA224635	224635	Terrabacteria group	Firmicutes	2.88438	32.8	-	JDPV01	2	3030	2876	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384100	GCA_000563835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/835/GCA_000563835.1_Stap_aure_M65003_V1	-	M65003
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.79925	52.1	-	LINT01	271	4966	4683	8/20/15	2/28/17	Contig	FDA	SAMN03894290	GCA_001272185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/185/GCA_001272185.1_Salmonella_enterica_CVM_N48703_v1.0	-	CVM N48703
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.32892	65.4	-	CVHS01	306	4385	4115	4/2/15	3/11/17	Contig	SC	SAMEA1016138	GCA_001322525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/525/GCA_001322525.1_6586_8_6	-	M0011153
Escherichia coli DEC3C	868145	PRJNA50927	50927	Proteobacteria	Gammaproteobacteria	5.48156	50.4	-	AIFG01	72	5942	5210	2/23/12	8/8/17	Contig	Institute for Genome Sciences	SAMN00190999	GCA_000249295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/295/GCA_000249295.2_ASM24929v2	22582382	DEC3C
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07136	39.7	-	CFRJ02	186	2226	2027	3/15/15	3/11/17	Contig	SC	SAMEA1463297	GCA_001302195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/195/GCA_001302195.2_7622_3_54	-	CH2033
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.59136	57.1	-	JTFW01	110	5742	5499	1/19/16	2/21/17	Scaffold	unverisity medical center groningen	SAMN03178255	GCA_001517745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/745/GCA_001517745.1_ASM151774v1	26067658	M098451
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.49217	66.4	-	FRVR01	108	6205	6006	12/9/16	3/21/17	Contig	DTU	SAMEA2357677	GCA_900148045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/045/GCA_900148045.1_82_1	-	-
Acinetobacter baumannii	470	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	3.94114	38.8	-	NQFK01	78	3848	3691	8/11/17	8/15/17	Contig	JCVI	SAMN07450715	GCA_002249505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/505/GCA_002249505.1_ASM224950v1	-	ABCRPUTH14
Acinetobacter baumannii	470	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	4.02266	38.8	-	NQFL01	88	3963	3803	8/11/17	8/15/17	Contig	JCVI	SAMN07450714	GCA_002249525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/525/GCA_002249525.1_ASM224952v1	-	ABCRPUTH15
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.38384	66.3	-	FRVY01	519	6349	5847	12/9/16	3/21/17	Contig	DTU	SAMEA2357695	GCA_900148055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/055/GCA_900148055.1_A	-	-
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.59203	57.1	-	JTGA01	124	5736	5511	1/19/16	2/21/17	Scaffold	unverisity medical center groningen	SAMN03178264	GCA_001517805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/805/GCA_001517805.1_ASM151780v1	26067658	M104145
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09553	39.6	-	CXOE01	178	2265	2043	7/19/15	3/11/17	Contig	SC	SAMEA1463108	GCA_001302365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/302/365/GCA_001302365.1_7622_3_71	-	CH2106
Escherichia coli DEC3D	868146	PRJNA50929	50929	Proteobacteria	Gammaproteobacteria	5.43712	50.4	-	AIFH01	96	5852	5133	2/23/12	8/8/17	Contig	Institute for Genome Sciences	SAMN00191008	GCA_000249315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/315/GCA_000249315.2_ASM24931v2	22582382	DEC3D
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36287	65.6	-	CFTH01	108	4285	4083	3/15/15	3/11/17	Contig	SC	SAMEA1016146	GCA_001322545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/545/GCA_001322545.1_6954_8_66	-	1633B
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.02586	51.7	-	LINU01	205	5097	4751	8/20/15	2/28/17	Contig	FDA	SAMN03894292	GCA_001272205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/205/GCA_001272205.1_Salmonella_enterica_CVM_N48705_v1.0	-	CVM N48705
Staphylococcus aureus M68467	1411555	PRJNA224636	224636	Terrabacteria group	Firmicutes	2.9446	32.8	-	JDPW01	29	3109	2955	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384101	GCA_000563855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/855/GCA_000563855.1_Stap_aure_M68467_V1	-	M68467
Staphylococcus aureus M68475	1411556	PRJNA224637	224637	Terrabacteria group	Firmicutes	2.86188	32.8	-	JDPX01	77	3006	2842	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384102	GCA_000563875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/875/GCA_000563875.1_Stap_aure_M68475_V1	-	M68475
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.69617	52.1	-	LINV01	35	4807	4555	8/20/15	2/28/17	Contig	FDA	SAMN03894306	GCA_001272215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/215/GCA_001272215.1_Salmonella_enterica_CVM_N50426_v1.0	-	CVM N50426
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.31754	65.4	-	CVHQ01	256	4368	4100	4/2/15	3/11/17	Contig	SC	SAMEA1016157	GCA_001322565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/565/GCA_001322565.1_6586_8_7	-	M0101321
Escherichia coli DEC3E	868147	PRJNA50931	50931	Proteobacteria	Gammaproteobacteria	5.52403	50.2	-	AIFI01	98	5992	5319	2/23/12	3/5/17	Contig	Institute for Genome Sciences	SAMN00191010	GCA_000249335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/335/GCA_000249335.2_ASM24933v2	22582382	DEC3E
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.11716	39.6	-	CIJB01	92	2298	2081	4/21/15	3/11/17	Contig	SC	SAMEA770000	GCA_001326335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/335/GCA_001326335.1_5242_3_3	-	19F/8
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.58995	57.1	-	JTFY01	123	5735	5499	1/19/16	2/21/17	Scaffold	unverisity medical center groningen	SAMN03178259	GCA_001517955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/955/GCA_001517955.1_ASM151795v1	26067658	M098441
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.42032	66.3	-	FRVV01	394	6309	5884	12/9/16	3/21/17	Contig	DTU	SAMEA2357696	GCA_900148065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/065/GCA_900148065.1_B	-	-
Acinetobacter baumannii	470	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	3.89804	38.9	-	NQEV01	91	3803	3646	8/11/17	8/15/17	Contig	JCVI	SAMN07450684	GCA_002249545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/545/GCA_002249545.1_ASM224954v1	-	ABCRPSTH08
Acinetobacter baumannii	470	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	3.89403	38.9	-	NQEY01	94	3812	3649	8/11/17	8/15/17	Contig	JCVI	SAMN07450597	GCA_002249585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/585/GCA_002249585.1_ASM224958v1	-	ABCRPSTH11
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.44065	66.3	-	FRVX01	359	6300	5909	12/9/16	3/21/17	Contig	DTU	SAMEA2357697	GCA_900148075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/075/GCA_900148075.1_C	-	-
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.51752	57.2	-	JXIW01	100	5522	5241	3/24/16	2/21/17	Scaffold	unverisity medical center groningen	SAMN03281039	GCA_001596905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/905/GCA_001596905.1_ASM159690v1	26864946	KPOII-4
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.98704	39.8	-	CIAC01	52	2198	1990	4/21/15	3/11/17	Contig	SC	SAMEA970292	GCA_001326855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/855/GCA_001326855.1_5242_8_6	-	BHN595
Escherichia coli DEC3F	868148	PRJNA50933	50933	Proteobacteria	Gammaproteobacteria	5.4079	50.3	-	AIFJ01	93	5803	5133	2/23/12	8/8/17	Contig	Institute for Genome Sciences	SAMN00191009	GCA_000249355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/355/GCA_000249355.2_ASM24935v2	22582382	DEC3F
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36684	65.6	-	CIES01	109	4283	4072	4/21/15	3/11/17	Contig	SC	SAMEA1403605	GCA_001322885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/885/GCA_001322885.1_7841_7_91	-	2072D
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.69419	52.1	-	LINW01	71	4804	4553	8/20/15	2/28/17	Contig	FDA	SAMN03894311	GCA_001272255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/255/GCA_001272255.1_Salmonella_enterica_CVM_N50431_v1.0	-	CVM N50431
Staphylococcus aureus M71813	1411557	PRJNA224638	224638	Terrabacteria group	Firmicutes	2.9252	32.8	-	JDPY01	31	3117	2946	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384103	GCA_000563895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/895/GCA_000563895.1_Stap_aure_M71813_V1	-	M71813
Staphylococcus aureus M74952	1411558	PRJNA224639	224639	Terrabacteria group	Firmicutes	2.88754	32.8	-	JDPZ01	32	3046	2870	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384104	GCA_000563915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/915/GCA_000563915.1_Stap_aure_M74952_V1	-	M74952
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.87517	52	-	LINY01	78	5008	4752	8/20/15	2/28/17	Contig	FDA	SAMN03894319	GCA_001272275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/275/GCA_001272275.1_Salmonella_enterica_CVM_N50439_v1.0	-	CVM N50439
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36514	65.6	-	CFKS01	116	4287	4085	3/15/15	3/11/17	Contig	SC	SAMEA1403631	GCA_001322945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/945/GCA_001322945.1_7156_7_86	-	1645P
Escherichia coli DEC4A	868149	PRJNA50935	50935	Proteobacteria	Gammaproteobacteria	5.37878	50.4	-	AIFK01	68	5795	5130	2/23/12	8/8/17	Contig	Institute for Genome Sciences	SAMN00191012	GCA_000249375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/375/GCA_000249375.2_ASM24937v2	22582382	DEC4A
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.03516	39.7	-	CHCW01	70	2219	2019	4/21/15	3/11/17	Contig	SC	SAMEA1020049	GCA_001328975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/975/GCA_001328975.1_5901_6_10	-	7848-05
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.51413	57.2	-	JXIV01	153	5528	5210	3/24/16	2/21/17	Scaffold	unverisity medical center groningen	SAMN03281031	GCA_001596915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/915/GCA_001596915.1_ASM159691v1	26864946	KPOII-2
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.41203	66.3	-	FRVZ01	429	6320	5873	12/9/16	3/21/17	Contig	DTU	SAMEA2357698	GCA_900148085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/085/GCA_900148085.1_D	-	-
Acinetobacter baumannii	470	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	3.9545	38.9	-	NQFH01	105	3878	3713	8/11/17	8/15/17	Contig	JCVI	SAMN07450718	GCA_002249605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/605/GCA_002249605.1_ASM224960v1	-	ABCRPUTH11
Acinetobacter baumannii	470	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	3.93892	38.8	-	NQFC01	77	3845	3690	8/11/17	8/15/17	Contig	JCVI	SAMN07450593	GCA_002249655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/655/GCA_002249655.1_ASM224965v1	-	ABCRPUTH06
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.46514	66.4	-	FRVW01	152	6159	5937	12/9/16	3/21/17	Contig	DTU	SAMEA2357701	GCA_900148095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/095/GCA_900148095.1_G	-	-
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.51282	57.2	-	JUBO01	91	5518	5250	3/24/16	2/21/17	Scaffold	unverisity medical center groningen	SAMN03223332	GCA_001596925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/925/GCA_001596925.1_ASM159692v1	26864946	KPOII-2
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.18912	39.5	-	CGAQ01	70	2410	2186	3/15/15	3/11/17	Contig	SC	SAMEA1020071	GCA_001328995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/995/GCA_001328995.1_6569_4_4	-	PT1175
Escherichia coli DEC4B	868150	PRJNA50937	50937	Proteobacteria	Gammaproteobacteria	5.63408	50.3	-	AIFL01	96	6145	5402	2/23/12	8/8/17	Contig	Institute for Genome Sciences	SAMN00191011	GCA_000249395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/395/GCA_000249395.2_ASM24939v2	22582382	DEC4B
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36287	65.6	-	CIJC01	105	4286	4075	4/21/15	3/11/17	Contig	SC	SAMEA1403635	GCA_001322965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/965/GCA_001322965.1_7156_7_87	-	1650V
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.69502	52.1	-	LINZ01	102	4811	4559	8/20/15	2/28/17	Contig	FDA	SAMN03894327	GCA_001272285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/285/GCA_001272285.1_Salmonella_enterica_CVM_N50447_v1.0	-	CVM N50447
Staphylococcus aureus T26751	1411560	PRJNA224641	224641	Terrabacteria group	Firmicutes	2.87644	32.8	-	JDQA01	2	3029	2870	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384106	GCA_000563935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/935/GCA_000563935.1_Stap_aure_T26751_V1	-	T26751
Staphylococcus aureus T30033	1411561	PRJNA224642	224642	Terrabacteria group	Firmicutes	2.87048	32.7	-	JDQB01	21	3005	2881	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384107	GCA_000563955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/955/GCA_000563955.1_Stap_aure_T30033_V1	-	T30033
Salmonella enterica subsp. enterica serovar Montevideo	115981	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.59722	52.2	-	LINX01	53	4650	4421	8/20/15	2/28/17	Contig	FDA	SAMN03894312	GCA_001272295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/295/GCA_001272295.1_Salmonella_enterica_CVM_N50432_v1.0	-	CVM N50432
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36535	65.6	-	CIER01	113	4297	4076	4/21/15	3/11/17	Contig	SC	SAMEA1403641	GCA_001323025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/025/GCA_001323025.1_7755_2_18	-	0153S
Escherichia coli DEC4C	868151	PRJNA50939	50939	Proteobacteria	Gammaproteobacteria	5.53417	50.5	-	AIFM01	62	5976	5248	2/23/12	8/8/17	Contig	Institute for Genome Sciences	SAMN00191013	GCA_000249415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/415/GCA_000249415.2_ASM24941v2	22582382	DEC4C
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.20799	39.5	-	CVMQ01	74	2459	2226	4/16/15	3/10/17	Contig	SC	SAMEA1020205	GCA_001329135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/135/GCA_001329135.1_6551_7_5	-	SPN3402
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.51816	57.2	-	JUBN01	102	5528	5233	3/24/16	2/21/17	Scaffold	unverisity medical center groningen	SAMN03223331	GCA_001596935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/935/GCA_001596935.1_ASM159693v1	26864946	KPOII-1
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.44205	66.3	-	FRWB01	356	6294	5904	12/9/16	3/21/17	Contig	DTU	SAMEA2357700	GCA_900148105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/105/GCA_900148105.1_F	-	-
Acinetobacter baumannii	470	PRJNA391474	391474	Proteobacteria	Gammaproteobacteria	4.05863	39	-	NLCO01	179	3981	3774	8/14/17	8/16/17	Contig	Instituto Oswaldo Cruz	SAMN07269295	GCA_002250465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/465/GCA_002250465.1_ASM225046v1	-	CCBH15815
Acinetobacter baumannii	470	PRJNA392887	392887	Proteobacteria	Gammaproteobacteria	3.92236	39.2	-	NKXQ01	580	3951	3674	8/21/17	8/23/17	Contig	IHU Mediteranee Infection	SAMN07311916	GCA_002261505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/505/GCA_002261505.1_ASM226150v1	-	554L
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.393	66.3	-	FRWC01	476	6332	5857	12/9/16	3/21/17	Contig	DTU	SAMEA2357699	GCA_900148115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/115/GCA_900148115.1_E	-	-
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.51493	57.2	-	JXIY01	97	5520	5245	3/24/16	2/21/17	Scaffold	unverisity medical center groningen	SAMN03281071	GCA_001596985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/985/GCA_001596985.1_ASM159698v1	26864946	KPOII-7
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	1.99708	39.7	-	CHCS01	230	2196	1979	4/21/15	3/11/17	Contig	SC	SAMEA1020266	GCA_001329195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/195/GCA_001329195.1_6237_8_10	-	S-009
Escherichia coli DEC4D	868152	PRJNA50941	50941	Proteobacteria	Gammaproteobacteria	5.38801	50.4	-	AIFN01	80	5784	5154	2/23/12	5/18/17	Contig	Institute for Genome Sciences	SAMN00191016	GCA_000249435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/435/GCA_000249435.2_ASM24943v2	22582382	DEC4D
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36213	65.6	-	CFUD01	107	4283	4081	3/15/15	3/11/17	Contig	SC	SAMEA1403657	GCA_001323085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/085/GCA_001323085.1_7755_3_93	-	type strain: 0591
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.97966	51.8	-	LIOA01	137	5097	4819	8/20/15	2/28/17	Contig	FDA	SAMN03894334	GCA_001272325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/325/GCA_001272325.1_Salmonella_enterica_CVM_N51243_v1.0	-	CVM N51243
Staphylococcus aureus T33139	1411562	PRJNA224643	224643	Terrabacteria group	Firmicutes	2.83207	32.8	-	JDQC01	57	2992	2814	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384108	GCA_000563975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/975/GCA_000563975.1_Stap_aure_T33139_V1	-	T33139
Staphylococcus aureus T33147	1411563	PRJNA224644	224644	Terrabacteria group	Firmicutes	2.8979	32.7	-	JDQD01	33	3061	2924	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384109	GCA_000563995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/563/995/GCA_000563995.1_Stap_aure_T33147_V1	-	T33147
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.18272	51.9	-	LIOC01	88	5362	5092	8/20/15	2/28/17	Contig	FDA	SAMN03894362	GCA_001272375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/375/GCA_001272375.1_Salmonella_enterica_CVM_N51271_v1.0	-	CVM N51271
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36725	65.6	-	CFMV01	115	4308	4091	3/15/15	3/11/17	Contig	SC	SAMEA1403662	GCA_001323105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/105/GCA_001323105.1_7769_8_69	-	1693R
Escherichia coli DEC4E	868153	PRJNA50943	50943	Proteobacteria	Gammaproteobacteria	5.41076	50.4	-	AIFO01	66	5797	5165	2/23/12	3/5/17	Contig	Institute for Genome Sciences	SAMN00191018	GCA_000249455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/455/GCA_000249455.2_ASM24945v2	22582382	DEC4E
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.02748	39.8	-	CVMP01	71	2223	1997	4/16/15	3/5/17	Contig	SC	SAMEA1020437	GCA_001329315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/315/GCA_001329315.1_6259_1_15	-	SN6027
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.37435	57.4	-	JXJG01	140	5328	5078	3/24/16	2/21/17	Scaffold	unverisity medical center groningen	SAMN03281111	GCA_001597015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/015/GCA_001597015.1_ASM159701v1	26864946	KP-33P
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.44185	66.3	-	FRWA01	325	6280	5918	12/9/16	3/21/17	Contig	DTU	SAMEA2357702	GCA_900148125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/125/GCA_900148125.1_H	-	-
Acinetobacter baumannii	470	PRJNA392854	392854	Proteobacteria	Gammaproteobacteria	4.05611	39	-	NKXP01	386	4069	3754	8/21/17	8/23/17	Contig	IHU Mediteranee Infection	SAMN07311763	GCA_002261535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/535/GCA_002261535.1_ASM226153v1	-	554S
Acinetobacter baumannii	470	PRJNA395649	395649	Proteobacteria	Gammaproteobacteria	3.94298	38.8	-	NOXP01	37	3833	3694	8/22/17	8/24/17	Contig	CSIR-IMTECH	SAMN07411957	GCA_002265555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/555/GCA_002265555.1_ASM226555v1	-	DR1
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.39263	66.3	-	FRWD01	454	6313	5857	12/9/16	3/21/17	Contig	DTU	SAMEA2357703	GCA_900148135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/135/GCA_900148135.1_Ii	-	-
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.46601	57.4	-	JXJI01	126	5558	5293	3/24/16	2/21/17	Scaffold	unverisity medical center groningen	SAMN03281122	GCA_001597065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/065/GCA_001597065.1_ASM159706v1	26864946	KP-86L
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.04795	39.7	-	CIEL01	55	2253	2021	4/21/15	3/5/17	Contig	SC	SAMEA1020510	GCA_001329375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/375/GCA_001329375.1_5749_6_4	-	LMG25
Escherichia coli DEC4F	868154	PRJNA50945	50945	Proteobacteria	Gammaproteobacteria	5.40411	50.3	-	AIFP01	74	5827	5161	2/23/12	8/8/17	Contig	Institute for Genome Sciences	SAMN00191017	GCA_000249475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/475/GCA_000249475.2_ASM24947v2	22582382	DEC4F
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37205	65.6	-	CHXS01	94	4289	4102	4/21/15	3/11/17	Contig	SC	SAMEA1403710	GCA_001323245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/245/GCA_001323245.1_7314_8_85	-	1561Y
Salmonella enterica subsp. enterica serovar Mbandaka	192954	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.93556	52.1	-	LIOE01	196	5148	4852	8/20/15	2/28/17	Contig	FDA	SAMN03894384	GCA_001272395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/395/GCA_001272395.1_Salmonella_enterica_CVM_N51293_v1.0	-	CVM N51293
Staphylococcus aureus T39328	1411564	PRJNA224645	224645	Terrabacteria group	Firmicutes	2.90368	32.7	-	JDQE01	31	3074	2943	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384110	GCA_000564015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/015/GCA_000564015.1_Stap_aure_T39328_V1	-	T39328
Staphylococcus aureus T39363	1411565	PRJNA224646	224646	Terrabacteria group	Firmicutes	2.78816	32.8	-	JDQF01	49	2888	2744	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384111	GCA_000564035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/035/GCA_000564035.1_Stap_aure_T39363_V1	-	T39363
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91444	52	-	LIOD01	90	4991	4690	8/20/15	2/28/17	Contig	FDA	SAMN03894368	GCA_001272405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/405/GCA_001272405.1_Salmonella_enterica_CVM_N51277_v1.0	-	CVM N51277
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37377	65.6	-	CFTV01	92	4286	4086	3/15/15	3/11/17	Contig	SC	SAMEA1403712	GCA_001323265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/265/GCA_001323265.1_7314_8_84	-	1555R
Escherichia coli DEC5A	868155	PRJNA50947	50947	Proteobacteria	Gammaproteobacteria	5.37156	50.4	-	AIFQ01	47	5644	5154	2/23/12	5/18/17	Contig	Institute for Genome Sciences	SAMN00191005	GCA_000249495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/495/GCA_000249495.2_ASM24949v2	22582382	DEC5A
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.077	39.5	-	CHYM01	72	2247	2041	4/21/15	3/5/17	Contig	SC	SAMEA1020739	GCA_001329495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/495/GCA_001329495.1_6259_4_9	-	SN11905
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.47724	57.3	-	JXJJ01	64	5439	5188	3/24/16	2/21/17	Scaffold	unverisity medical center groningen	SAMN03281123	GCA_001597075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/075/GCA_001597075.1_ASM159707v1	26864946	KP-33F
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.41192	66.3	-	FRWE01	358	6244	5874	12/9/16	3/21/17	Contig	DTU	SAMEA2357704	GCA_900148145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/145/GCA_900148145.1_J	-	-
Acinetobacter baumannii	470	PRJNA395649	395649	Proteobacteria	Gammaproteobacteria	3.89056	39	-	NOXO01	92	3793	3619	8/22/17	8/24/17	Contig	CSIR-IMTECH	SAMN07411958	GCA_002265675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/675/GCA_002265675.1_ASM226567v1	-	DR2
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.43335	66.3	-	FRWG01	395	6321	5901	12/9/16	3/21/17	Contig	DTU	SAMEA2357705	GCA_900148155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/155/GCA_900148155.1_K	-	-
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.51364	57.2	-	JXIU01	88	5509	5237	3/24/16	2/21/17	Scaffold	unverisity medical center groningen	SAMN03281029	GCA_001597095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/095/GCA_001597095.1_ASM159709v1	26864946	KPOII-1
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.05628	39.7	-	CIFB01	81	2257	2030	4/21/15	3/5/17	Contig	SC	SAMEA1020852	GCA_001329595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/595/GCA_001329595.1_6187_4_19	-	LMG136
Escherichia coli DEC5B	868156	PRJNA50949	50949	Proteobacteria	Gammaproteobacteria	5.48314	50.5	-	AIFR01	73	5811	5217	2/23/12	2/22/17	Contig	Institute for Genome Sciences	SAMN00191006	GCA_000249515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/515/GCA_000249515.2_ASM24951v2	22582382	DEC5B
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37645	65.6	-	CFTQ01	102	4301	4115	3/15/15	3/11/17	Contig	SC	SAMEA1403727	GCA_001323305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/305/GCA_001323305.1_7755_4_16	-	0702P
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.86667	52.2	-	LIOF01	61	4974	4748	8/20/15	2/28/17	Contig	FDA	SAMN03894386	GCA_001272415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/415/GCA_001272415.1_Salmonella_enterica_CVM_N51295_v1.0	-	CVM N51295
Staphylococcus aureus T42722	1411566	PRJNA224647	224647	Terrabacteria group	Firmicutes	2.84352	32.8	-	JDQG01	58	2955	2803	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384112	GCA_000564055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/055/GCA_000564055.1_Stap_aure_T42722_V1	-	T42722
Staphylococcus aureus T62346	1411567	PRJNA224648	224648	Terrabacteria group	Firmicutes	2.86976	32.7	-	JDQH01	24	3007	2875	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384113	GCA_000564075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/075/GCA_000564075.1_Stap_aure_T62346_V1	-	T62346
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.6959	52.1	-	LIOH01	34	4800	4552	8/20/15	2/28/17	Contig	FDA	SAMN03894400	GCA_001272455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/455/GCA_001272455.1_Salmonella_enterica_CVM_N51309_v1.0	-	CVM N51309
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36692	65.6	-	CFTU01	107	4295	4080	3/15/15	3/11/17	Contig	SC	SAMEA1403776	GCA_001323505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/505/GCA_001323505.1_7156_7_91	-	1678A
Escherichia coli DEC5C	868157	PRJNA50951	50951	Proteobacteria	Gammaproteobacteria	5.32558	50.4	-	AIFS01	54	5631	5120	2/23/12	5/18/17	Contig	Institute for Genome Sciences	SAMN00191007	GCA_000249535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/535/GCA_000249535.2_ASM24953v2	22582382	DEC5C
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.14708	39.5	-	CHJP01	78	2360	2135	4/21/15	3/11/17	Contig	SC	SAMEA1886099	GCA_001329875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/875/GCA_001329875.1_6569_6_6	-	SPN8332
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.51513	57.2	-	JXIX01	115	5514	5234	3/24/16	2/21/17	Scaffold	unverisity medical center groningen	SAMN03281070	GCA_001597115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/115/GCA_001597115.1_ASM159711v1	26864946	KPOII-6
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.46499	66.3	-	FRWF01	265	6252	5940	12/9/16	3/21/17	Contig	DTU	SAMEA2357706	GCA_900148165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/165/GCA_900148165.1_L	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.45306	66.2	-	FRWH01	697	6533	5868	12/9/16	3/21/17	Contig	DTU	SAMEA2357707	GCA_900148175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/175/GCA_900148175.1_LRJ01_2	-	-
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.52084	57.2	-	JXIZ01	93	5527	5249	3/24/16	2/21/17	Scaffold	unverisity medical center groningen	SAMN03281072	GCA_001597145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/145/GCA_001597145.1_ASM159714v1	26864946	KPOII-8
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.18462	39.5	-	CVMR01	90	2406	2175	4/16/15	3/11/17	Contig	SC	SAMEA1886100	GCA_001329895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/895/GCA_001329895.1_6569_6_7	-	SPN4683
Escherichia coli DEC5D	868158	PRJNA50953	50953	Proteobacteria	Gammaproteobacteria	5.23196	50.4	-	AIFT01	48	5441	4928	2/23/12	2/22/17	Contig	Institute for Genome Sciences	SAMN00191002	GCA_000249555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/555/GCA_000249555.2_ASM24955v2	22582382	DEC5D
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36623	65.6	-	CFUC01	112	4291	4085	3/15/15	3/11/17	Contig	SC	SAMEA1403782	GCA_001323565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/565/GCA_001323565.1_7755_4_39	-	0776V
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91657	52.1	-	LIOB01	83	5041	4823	8/20/15	2/28/17	Contig	FDA	SAMN03894360	GCA_001272465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/465/GCA_001272465.1_Salmonella_enterica_CVM_N51269_v1.0	-	CVM N51269
Staphylococcus aureus T69686	1411568	PRJNA224649	224649	Terrabacteria group	Firmicutes	2.78469	32.8	-	JDQI01	42	2884	2741	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384114	GCA_000564095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/095/GCA_000564095.1_Stap_aure_T69686_V1	-	T69686
Staphylococcus aureus T69703	1411569	PRJNA224650	224650	Terrabacteria group	Firmicutes	2.82154	32.8	-	JDQJ01	48	2960	2817	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384115	GCA_000564115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/115/GCA_000564115.1_Stap_aure_T69703_V1	-	T69703
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.86684	52.2	-	LIOG01	62	4969	4744	8/20/15	2/28/17	Contig	FDA	SAMN03894387	GCA_001272475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/475/GCA_001272475.1_Salmonella_enterica_CVM_N51296_v1.0	-	CVM N51296
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36868	65.6	-	CFUB01	113	4303	4082	3/15/15	3/11/17	Contig	SC	SAMEA1403884	GCA_001323885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/885/GCA_001323885.1_7755_3_82	-	0530C
Escherichia coli DEC5E	868159	PRJNA50955	50955	Proteobacteria	Gammaproteobacteria	5.68076	50.5	-	AIFU01	49	6060	5464	2/23/12	5/18/17	Contig	Institute for Genome Sciences	SAMN00191021	GCA_000249575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/575/GCA_000249575.2_ASM24957v2	22582382	DEC5E
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.04385	39.7	-	CHYO01	73	2243	2030	4/21/15	3/11/17	Contig	SC	SAMEA682310	GCA_001330055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/055/GCA_001330055.1_5468_2_8	-	Tw01_0057
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.52264	57.2	-	JXJA01	101	5527	5247	3/24/16	2/21/17	Scaffold	unverisity medical center groningen	SAMN03281073	GCA_001597165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/165/GCA_001597165.1_ASM159716v1	26864946	KPOII-9
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.29291	66	-	FRWI01	1014	6565	5628	12/9/16	3/21/17	Contig	DTU	SAMEA2357708	GCA_900148185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/185/GCA_900148185.1_LRJ02	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.39821	65.8	-	FRWK01	1045	6749	5783	12/9/16	3/21/17	Contig	DTU	SAMEA2357709	GCA_900148195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/195/GCA_900148195.1_LRJ03	-	-
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.519	57.2	-	JXJC01	96	5524	5254	3/24/16	2/21/17	Scaffold	unverisity medical center groningen	SAMN03281081	GCA_001597175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/175/GCA_001597175.1_ASM159717v1	26864946	KPEII-1
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.04081	39.7	-	CVIH01	70	2234	2021	4/2/15	3/11/17	Contig	SC	SAMEA682342	GCA_001330195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/195/GCA_001330195.1_5468_1_2	-	K01_01248
Escherichia coli DEC6A	868160	PRJNA50957	50957	Proteobacteria	Gammaproteobacteria	5.3897	50.6	-	AIFV01	61	5764	5112	2/23/12	3/5/17	Contig	Institute for Genome Sciences	SAMN00191001	GCA_000249595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/595/GCA_000249595.2_ASM24959v2	22582382	DEC6A
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36624	65.6	-	CFTI01	116	4285	4080	3/15/15	3/11/17	Contig	SC	SAMEA1403887	GCA_001323905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/905/GCA_001323905.1_7156_7_77	-	1136L
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.69698	52.1	-	LIOI01	36	4801	4555	8/20/15	2/28/17	Contig	FDA	SAMN03894401	GCA_001272485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/485/GCA_001272485.1_Salmonella_enterica_CVM_N51310_v1.0	-	CVM N51310
Staphylococcus aureus T69716	1411570	PRJNA224651	224651	Terrabacteria group	Firmicutes	2.8163	32.8	-	JDQK01	31	2952	2784	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384116	GCA_000564135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/135/GCA_000564135.1_Stap_aure_T69716_V1	-	T69716
Staphylococcus aureus T69721	1411571	PRJNA224652	224652	Terrabacteria group	Firmicutes	2.78604	32.8	-	JDQL01	59	2900	2756	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384117	GCA_000564155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/155/GCA_000564155.1_Stap_aure_T69721_V1	-	T69721
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.89205	52.2	-	LIOJ01	71	5019	4786	8/20/15	2/28/17	Contig	FDA	SAMN03894405	GCA_001272535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/535/GCA_001272535.1_Salmonella_enterica_CVM_N51314_v1.0	-	CVM N51314
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35777	65.6	-	CHIW01	94	4281	4087	4/21/15	3/11/17	Contig	SC	SAMEA1403906	GCA_001323985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/985/GCA_001323985.1_7769_7_19	-	1269F
Escherichia coli DEC6B	868161	PRJNA50959	50959	Proteobacteria	Gammaproteobacteria	5.3237	50.8	-	AIFW01	65	5686	4980	2/23/12	8/8/17	Contig	Institute for Genome Sciences	SAMN00190997	GCA_000249615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/615/GCA_000249615.2_ASM24961v2	22582382	DEC6B
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.11935	39.5	-	CVIB01	72	2318	2098	4/2/15	3/5/17	Contig	SC	SAMEA682344	GCA_001330215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/215/GCA_001330215.1_5504_3_2	-	K13_0827
Klebsiella pneumoniae	573	PRJNA252925	252925	Proteobacteria	Gammaproteobacteria	5.51724	57.2	-	JXJE01	98	5517	5252	3/24/16	2/21/17	Scaffold	unverisity medical center groningen	SAMN03281109	GCA_001597225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/225/GCA_001597225.1_ASM159722v1	26864946	KPEII-3
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.55534	66	-	FRWJ01	756	6708	6021	12/9/16	3/21/17	Contig	DTU	SAMEA2357710	GCA_900148205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/205/GCA_900148205.1_LRJ04	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.08587	66.3	-	FRWO01	779	6232	5532	12/9/16	3/21/17	Contig	DTU	SAMEA2357711	GCA_900148215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/215/GCA_900148215.1_LRJ05	-	-
Klebsiella pneumoniae	573	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	5.62544	56.8	-	LQQF01	117	5746	5441	5/4/16	2/21/17	Scaffold	Miami University	SAMN03076168	GCA_001647455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/455/GCA_001647455.1_ASM164745v1	-	101436
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.15935	39.5	-	CVIM01	83	2365	2145	4/2/15	3/5/17	Contig	SC	SAMEA682345	GCA_001330235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/235/GCA_001330235.1_5504_3_1	-	K13_0810
Escherichia coli DEC6C	868162	PRJNA50961	50961	Proteobacteria	Gammaproteobacteria	5.11768	50.6	-	AIFX01	77	5593	4657	2/23/12	8/8/17	Contig	Institute for Genome Sciences	SAMN00190995	GCA_000249635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/635/GCA_000249635.2_ASM24963v2	22582382	DEC6C
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3828	65.6	-	CGEL01	104	4303	4099	3/15/15	3/11/17	Contig	SC	SAMEA1403934	GCA_001324045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/045/GCA_001324045.1_7769_7_6	-	1178G
Salmonella enterica	28901	PRJNA289090	289090	Proteobacteria	Gammaproteobacteria	4.99639	51.9	-	LIKP01	58	5116	4863	8/26/15	2/28/17	Contig	NIH	SAMN03842015	GCA_001275185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/185/GCA_001275185.1_ASM127518v1	26494672	FSAN236CA
Staphylococcus aureus T72876	1411572	PRJNA224653	224653	Terrabacteria group	Firmicutes	2.83731	32.8	-	JDQM01	71	2969	2809	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384118	GCA_000564175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/175/GCA_000564175.1_Stap_aure_T72876_V1	-	T72876
Staphylococcus aureus T72889	1411573	PRJNA224654	224654	Terrabacteria group	Firmicutes	2.82965	32.8	-	JDQN01	48	2958	2813	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384119	GCA_000564195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/195/GCA_000564195.1_Stap_aure_T72889_V1	-	T72889
Salmonella enterica	28901	PRJNA289090	289090	Proteobacteria	Gammaproteobacteria	5.16051	52.1	-	LIKS01	192	5315	4969	8/26/15	2/28/17	Contig	NIH	SAMN03842020	GCA_001275195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/195/GCA_001275195.1_ASM127519v1	26494672	FSAN332CC
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36469	65.6	-	CFTN01	104	4277	4097	3/15/15	3/11/17	Contig	SC	SAMEA1403948	GCA_001324105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/105/GCA_001324105.1_7156_6_29	-	1086G
Escherichia coli DEC6D	868163	PRJNA50963	50963	Proteobacteria	Gammaproteobacteria	4.98166	50.6	-	AIFY01	60	5359	4602	2/23/12	8/8/17	Contig	Institute for Genome Sciences	SAMN00190996	GCA_000249655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/655/GCA_000249655.2_ASM24965v2	22582382	DEC6D
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.14917	39.5	-	CVIL01	76	2360	2146	4/2/15	3/5/17	Contig	SC	SAMEA682349	GCA_001330295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/295/GCA_001330295.1_5504_3_9	-	K13_082
Klebsiella pneumoniae	573	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	5.52621	57.1	-	LQQE01	56	5532	5269	5/4/16	2/21/17	Scaffold	Miami University	SAMN03076170	GCA_001647465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/465/GCA_001647465.1_ASM164746v1	-	105371
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	5.82415	66	-	FRWS01	1220	6174	5107	12/9/16	3/21/17	Contig	DTU	SAMEA2357712	GCA_900148225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/225/GCA_900148225.1_LRJ06	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.07685	66.2	-	FRWQ01	827	6219	5453	12/9/16	3/21/17	Contig	DTU	SAMEA2357713	GCA_900148235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/235/GCA_900148235.1_LRJ07	-	-
Klebsiella pneumoniae	573	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	5.63726	57.2	-	LQQD01	85	5728	5464	5/4/16	2/21/17	Scaffold	Miami University	SAMN03076172	GCA_001647475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/475/GCA_001647475.1_ASM164747v1	-	101731
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.15209	39.5	-	CVIK01	83	2346	2129	4/2/15	3/5/17	Contig	SC	SAMEA682406	GCA_001330455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/455/GCA_001330455.1_5504_3_4	-	K13_0940
Escherichia coli DEC6E	868164	PRJNA50965	50965	Proteobacteria	Gammaproteobacteria	5.07681	50.6	-	AIFZ01	53	5414	4782	2/23/12	5/18/17	Contig	Institute for Genome Sciences	SAMN00190994	GCA_000249675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/675/GCA_000249675.2_ASM24967v2	22582382	DEC6E
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36723	65.6	-	CFUG01	121	4305	4081	3/15/15	3/11/17	Contig	SC	SAMEA1403974	GCA_001324225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/225/GCA_001324225.1_7769_8_88	-	1742V
Salmonella enterica	28901	PRJNA289090	289090	Proteobacteria	Gammaproteobacteria	4.90049	52.1	-	LIKQ01	56	4998	4751	8/26/15	2/28/17	Contig	NIH	SAMN03842017	GCA_001275205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/205/GCA_001275205.1_ASM127520v1	26494672	FCUN156CA
Staphylococcus aureus T76010	1411574	PRJNA224655	224655	Terrabacteria group	Firmicutes	2.73576	32.8	-	JDQO01	40	2818	2690	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384120	GCA_000564215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/215/GCA_000564215.1_Stap_aure_T76010_V1	-	T76010
Staphylococcus aureus T76018	1411575	PRJNA224656	224656	Terrabacteria group	Firmicutes	2.80439	32.8	-	JDQP01	49	2910	2768	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384121	GCA_000564235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/235/GCA_000564235.1_Stap_aure_T76018_V1	-	T76018
Salmonella enterica	28901	PRJNA289090	289090	Proteobacteria	Gammaproteobacteria	5.13558	52.1	-	LIKR01	58	5292	4980	8/26/15	2/28/17	Contig	NIH	SAMN03842018	GCA_001275215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/215/GCA_001275215.1_ASM127521v1	26494672	UG1286CA
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36824	65.6	-	CFMO01	107	4277	4079	3/15/15	3/11/17	Contig	SC	SAMEA1404008	GCA_001324285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/285/GCA_001324285.1_7314_8_76	-	0916X
Escherichia coli DEC7A	868165	PRJNA50967	50967	Proteobacteria	Gammaproteobacteria	5.24812	50.7	-	AIGA01	64	5551	4932	2/23/12	5/18/17	Contig	Institute for Genome Sciences	SAMN00190992	GCA_000249695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/695/GCA_000249695.2_ASM24969v2	22582382	DEC7A
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.03974	39.7	-	CHYQ01	80	2245	2017	4/21/15	3/11/17	Contig	SC	SAMEA682574	GCA_001330735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/735/GCA_001330735.1_5468_2_10	-	Tw01_0067
Klebsiella pneumoniae	573	PRJNA311932	311932	Proteobacteria	Gammaproteobacteria	5.56641	57.1	-	LSVA01	88	5544	5296	5/31/16	2/21/17	Scaffold	National Institute of Health Dr Ricardo Jorge	SAMN04497998	GCA_001653695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/695/GCA_001653695.1_ASM165369v1	-	INSali390
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.39778	65.3	-	FRWP01	1325	6893	5711	12/9/16	3/21/17	Contig	DTU	SAMEA2357714	GCA_900148245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/245/GCA_900148245.1_LRJ08	-	-
Acinetobacter baumannii	470	PRJEB10709	317836	Proteobacteria	Gammaproteobacteria	3.91228	38.9	-	CZWF01	109	3825	3612	4/8/16	3/20/17	Contig	LSHTM	SAMEA3650400	GCA_900010325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/325/GCA_900010325.1_BAL_242_assembly	-	-
Acinetobacter baumannii	470	PRJEB10709	317836	Proteobacteria	Gammaproteobacteria	4.02884	39	-	CZWD01	86	3991	3762	4/8/16	3/20/17	Contig	LSHTM	SAMEA3650405	GCA_900010465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/465/GCA_900010465.1_BAL_062_Assembly	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	5.90863	64.9	-	FRWY01	1712	6531	5115	12/9/16	3/21/17	Contig	DTU	SAMEA2357715	GCA_900148255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/255/GCA_900148255.1_LRJ09	-	-
Klebsiella pneumoniae	573	PRJNA320017	320017	Proteobacteria	Gammaproteobacteria	5.76673	57	-	LXRN01	226	5830	5518	7/28/16	2/21/17	Scaffold	Fatima Jinnah Women University	SAMN04914392	GCA_001695775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/695/775/GCA_001695775.1_ASM169577v1	-	MB361
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.04284	39.7	-	CGAN01	97	2250	2030	3/15/15	3/11/17	Contig	SC	SAMEA682579	GCA_001330795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/795/GCA_001330795.1_5477_6_8	-	M01_9995
Escherichia coli DEC7B	868166	PRJNA50969	50969	Proteobacteria	Gammaproteobacteria	5.24082	50.5	-	AIGB01	148	5510	4960	2/23/12	5/18/17	Contig	Institute for Genome Sciences	SAMN00190993	GCA_000249715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/715/GCA_000249715.2_ASM24971v2	22582382	DEC7B
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36884	65.6	-	CGEO01	118	4293	4081	3/15/15	3/11/17	Contig	SC	SAMEA1404036	GCA_001324325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/325/GCA_001324325.1_7841_7_70	-	2011M
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA275139	275139	Proteobacteria	Gammaproteobacteria	4.78	52.3	-	JZTJ01	49	4802	4557	8/31/15	2/28/17	Contig	U.S. Food and Drug Administration	SAMN03339650	GCA_001276665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/665/GCA_001276665.1_ASM127666v1	26303940	50259
Staphylococcus aureus T76030	1411576	PRJNA224657	224657	Terrabacteria group	Firmicutes	2.89684	32.7	-	JDQQ01	32	3053	2917	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384122	GCA_000564255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/255/GCA_000564255.1_Stap_aure_T76030_V1	-	T76030
Staphylococcus aureus T79159	1411577	PRJNA224658	224658	Terrabacteria group	Firmicutes	2.8172	32.8	-	JDQR01	53	2942	2809	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384123	GCA_000564275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/275/GCA_000564275.1_Stap_aure_T79159_V1	-	T79159
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA275139	275139	Proteobacteria	Gammaproteobacteria	4.82657	52.3	-	JZTL01	56	4861	4598	8/31/15	2/28/17	Contig	U.S. Food and Drug Administration	SAMN03339652	GCA_001276675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/675/GCA_001276675.1_ASM127667v1	26303940	50261
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36658	65.6	-	CFNA01	94	4290	4075	3/15/15	3/11/17	Contig	SC	SAMEA1469487	GCA_001324365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/365/GCA_001324365.1_7935_3_56	-	2089X
Escherichia coli DEC7C	868167	PRJNA50973	50973	Proteobacteria	Gammaproteobacteria	5.30814	50.7	-	AIGC01	68	5622	5056	2/23/12	2/22/17	Contig	Institute for Genome Sciences	SAMN00217322	GCA_000249735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/735/GCA_000249735.2_ASM24973v2	22582382	DEC7C
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.01965	39.7	-	CVID01	74	2201	1987	4/2/15	3/11/17	Contig	SC	SAMEA682608	GCA_001330935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/935/GCA_001330935.1_5477_6_9	-	V01_99112
Klebsiella pneumoniae	573	PRJNA322421	322421	Proteobacteria	Gammaproteobacteria	5.53807	57	-	LYWN01	62	5537	5318	8/9/16	2/21/17	Scaffold	Zhejiang university	SAMN05170670	GCA_001701575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/575/GCA_001701575.1_ASM170157v1	-	SKLX2722
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.49331	66.4	-	FRWL01	158	6241	5994	12/9/16	3/21/17	Contig	DTU	SAMEA2357716	GCA_900148265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/265/GCA_900148265.1_LRJ14	-	-
Acinetobacter baumannii	470	PRJEB10709	317836	Proteobacteria	Gammaproteobacteria	3.95387	39	-	CZWB01	59	3776	3596	4/8/16	3/20/17	Contig	LSHTM	SAMEA3650401	GCA_900011275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/275/GCA_900011275.1_BAL_255_assembly	-	-
Acinetobacter baumannii	470	PRJEB10709	317836	Proteobacteria	Gammaproteobacteria	3.7747	38.9	-	CZWE01	154	3715	3390	4/8/16	3/20/17	Contig	LSHTM	SAMEA3650402	GCA_900011285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/285/GCA_900011285.1_BAL_266_Assembly	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.48726	66.4	-	FRWN01	120	6207	6013	12/9/16	3/21/17	Contig	DTU	SAMEA2357717	GCA_900148275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/275/GCA_900148275.1_LRJ15	-	-
Klebsiella pneumoniae	573	PRJNA322421	322421	Proteobacteria	Gammaproteobacteria	5.50541	57.2	-	LYWQ01	36	5512	5275	8/9/16	2/21/17	Scaffold	Zhejiang university	SAMN05172929	GCA_001701615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/615/GCA_001701615.1_ASM170161v1	-	SKLX2821
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.13275	39.7	-	CVHD01	87	2288	2019	4/2/15	3/11/17	Contig	SC	SAMEA1022760	GCA_001333955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/955/GCA_001333955.1_5756_7_7	-	315
Escherichia coli DEC7D	868168	PRJNA50975	50975	Proteobacteria	Gammaproteobacteria	5.36143	50.6	-	AIGD01	48	5719	5148	2/23/12	5/18/17	Contig	Institute for Genome Sciences	SAMN00217323	GCA_000249755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/755/GCA_000249755.2_ASM24975v2	22582382	DEC7D
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3621	65.6	-	CVMA01	90	4288	4081	4/10/15	3/11/17	Contig	SC	SAMEA1469521	GCA_001324585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/585/GCA_001324585.1_7935_3_85	-	H111920015
Salmonella enterica subsp. enterica serovar Montevideo	115981	PRJNA275139	275139	Proteobacteria	Gammaproteobacteria	5.03545	51.8	-	JZTM01	78	5130	4836	8/31/15	2/28/17	Contig	U.S. Food and Drug Administration	SAMN03339653	GCA_001276695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/695/GCA_001276695.1_ASM127669v1	26303940	50262
Staphylococcus aureus T82627	1411578	PRJNA224659	224659	Terrabacteria group	Firmicutes	2.83122	32.8	-	JDQS01	65	2958	2806	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384124	GCA_000564295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/295/GCA_000564295.1_Stap_aure_T82627_V1	-	T82627
Staphylococcus aureus T86006	1411579	PRJNA224660	224660	Terrabacteria group	Firmicutes	2.72937	32.8	-	JDQT01	38	2814	2683	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384125	GCA_000564315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/315/GCA_000564315.1_Stap_aure_T86006_V1	-	T86006
Salmonella enterica subsp. enterica serovar Senftenberg	28150	PRJNA275139	275139	Proteobacteria	Gammaproteobacteria	5.2344	51.6	-	JZTN01	78	5356	5063	8/31/15	2/28/17	Contig	U.S. Food and Drug Administration	SAMN03339654	GCA_001276745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/745/GCA_001276745.1_ASM127674v1	26303940	50263
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39466	65.6	-	CVLY01	88	4294	4083	4/10/15	3/11/17	Contig	SC	SAMEA1469525	GCA_001324645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/645/GCA_001324645.1_7935_3_83	-	H111900019
Escherichia coli DEC7E	868169	PRJNA50977	50977	Proteobacteria	Gammaproteobacteria	5.13898	50.6	-	AIGE01	57	5388	4830	2/23/12	5/18/17	Contig	Institute for Genome Sciences	SAMN00190987	GCA_000249775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/775/GCA_000249775.2_ASM24977v2	22582382	DEC7E
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.12575	39.7	-	CFMJ01	66	2272	1987	3/15/15	3/11/17	Contig	SC	SAMEA1022779	GCA_001334015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/015/GCA_001334015.1_5737_8_2	-	203
Klebsiella pneumoniae	573	PRJNA322421	322421	Proteobacteria	Gammaproteobacteria	5.53651	57.2	-	LYWR01	69	5534	5273	8/9/16	2/21/17	Scaffold	Zhejiang university	SAMN05172930	GCA_001701625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/625/GCA_001701625.1_ASM170162v1	-	SKLX2836
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.25614	66.5	-	FRWM01	94	5975	5731	12/9/16	3/21/17	Contig	DTU	SAMEA2357718	GCA_900148285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/285/GCA_900148285.1_LRJ16	-	-
Acinetobacter baumannii	470	PRJEB10709	317836	Proteobacteria	Gammaproteobacteria	3.97424	39.1	-	CZWC01	114	3925	3636	4/8/16	3/20/17	Contig	LSHTM	SAMEA3650403	GCA_900011295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/295/GCA_900011295.1_ATCC19606_assembly	-	-
Acinetobacter baumannii	470	PRJEB10709	317836	Proteobacteria	Gammaproteobacteria	4.02884	39	-	CZWG01	86	3991	3762	4/8/16	3/20/17	Contig	LSHTM	SAMEA3647785	GCA_900011305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/305/GCA_900011305.1_BAL_062_assembly	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.3147	66.5	-	FRWR01	111	6045	5785	12/9/16	3/21/17	Contig	DTU	SAMEA2357719	GCA_900148295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/295/GCA_900148295.1_LRJ17	-	-
Klebsiella pneumoniae	573	PRJNA322421	322421	Proteobacteria	Gammaproteobacteria	5.53412	57.1	-	LYWS01	48	5574	5333	8/9/16	2/21/17	Scaffold	Zhejiang university	SAMN05172931	GCA_001701695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/695/GCA_001701695.1_ASM170169v1	-	SKLX2845
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.03282	39.7	-	CVGT01	60	2217	1992	4/2/15	3/11/17	Contig	SC	SAMEA1022786	GCA_001334035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/035/GCA_001334035.1_5756_7_9	-	329
Escherichia coli DEC8A	868170	PRJNA50979	50979	Proteobacteria	Gammaproteobacteria	5.65485	50.2	-	AIGF01	101	6180	5377	2/23/12	8/8/17	Contig	Institute for Genome Sciences	SAMN00190985	GCA_000249795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/795/GCA_000249795.2_ASM24979v2	22582382	DEC8A
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35636	65.6	-	CIEJ01	69	4272	4065	4/21/15	3/11/17	Contig	SC	SAMEA1707353	GCA_001325425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/425/GCA_001325425.1_8939_3_73	-	2347C
Salmonella enterica subsp. enterica serovar Senftenberg	28150	PRJNA275139	275139	Proteobacteria	Gammaproteobacteria	5.15406	51.7	-	JZTO01	65	5236	4952	8/31/15	2/28/17	Contig	U.S. Food and Drug Administration	SAMN03339655	GCA_001276765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/765/GCA_001276765.1_ASM127676v1	26303940	50264
Staphylococcus aureus T86045	1411580	PRJNA224661	224661	Terrabacteria group	Firmicutes	2.82279	32.8	-	JDQU01	43	2925	2786	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384126	GCA_000564335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/335/GCA_000564335.1_Stap_aure_T86045_V1	-	T86045
Staphylococcus aureus T86048	1411581	PRJNA224662	224662	Terrabacteria group	Firmicutes	2.85812	32.9	-	JDQV01	67	2980	2824	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384127	GCA_000564355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/355/GCA_000564355.1_Stap_aure_T86048_V1	-	T86048
Salmonella enterica subsp. enterica serovar Senftenberg	28150	PRJNA275139	275139	Proteobacteria	Gammaproteobacteria	5.19482	51.7	-	JZTP01	73	5311	5026	8/31/15	2/28/17	Contig	U.S. Food and Drug Administration	SAMN03339656	GCA_001276775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/775/GCA_001276775.1_ASM127677v1	26303940	50265
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35496	65.6	-	CHJB01	62	4263	4077	4/21/15	3/11/17	Contig	SC	SAMEA1707434	GCA_001325625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/625/GCA_001325625.1_8898_8_58	-	type strain: 2178
Escherichia coli DEC8B	868171	PRJNA50981	50981	Proteobacteria	Gammaproteobacteria	5.37105	50.6	-	AIGG01	100	5814	5079	2/23/12	8/8/17	Contig	Institute for Genome Sciences	SAMN00217324	GCA_000249815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/815/GCA_000249815.2_ASM24981v2	22582382	DEC8B
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.12375	39.7	-	CFIY01	69	2281	1988	3/15/15	3/11/17	Contig	SC	SAMEA1022894	GCA_001334155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/155/GCA_001334155.1_5737_2_4	-	379
Klebsiella pneumoniae	573	PRJNA322421	322421	Proteobacteria	Gammaproteobacteria	5.50695	57.1	-	LYWV01	56	5528	5282	8/9/16	2/21/17	Scaffold	Zhejiang university	SAMN05172951	GCA_001701705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/705/GCA_001701705.1_ASM170170v1	-	SKLX2900
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	7.01114	65.8	-	FRWU01	183	6791	6523	12/9/16	3/21/17	Contig	DTU	SAMEA2357721	GCA_900148305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/305/GCA_900148305.1_LRJ19	-	-
Acinetobacter baumannii	470	PRJEB12351	313175	Proteobacteria	Gammaproteobacteria	3.95869	39.1	-	FCND01	711	3899	3641	2/25/16	3/19/17	Contig	UNIVERSITY OF WARWICK	SAMEA3724636	GCA_900019965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/965/GCA_900019965.1_acinetobacter_baumannii_isolate_strainD	-	D
Acinetobacter baumannii	470	PRJEB12351	313175	Proteobacteria	Gammaproteobacteria	3.95834	39	-	FCNG01	270	3864	3695	2/25/16	3/19/17	Contig	UNIVERSITY OF WARWICK	SAMEA3724637	GCA_900019975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/975/GCA_900019975.1_acinetobacter_baumannii_isolate_strainE	-	E
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	7.00533	65.8	-	FRWV01	161	6762	6531	12/9/16	3/21/17	Contig	DTU	SAMEA2357720	GCA_900148315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/315/GCA_900148315.1_LRJ18	-	-
Klebsiella pneumoniae	573	PRJNA322421	322421	Proteobacteria	Gammaproteobacteria	5.37942	57.4	-	LYWW01	43	5382	5154	8/9/16	2/21/17	Scaffold	Zhejiang university	SAMN05172952	GCA_001701725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/725/GCA_001701725.1_ASM170172v1	-	SKLX2993
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.12239	39.7	-	CIIH01	64	2264	1975	4/21/15	3/11/17	Contig	SC	SAMEA1022918	GCA_001334215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/215/GCA_001334215.1_5737_8_5	-	206
Escherichia coli DEC8C	868172	PRJNA50983	50983	Proteobacteria	Gammaproteobacteria	5.91075	50.4	-	AIGH01	95	6636	5790	2/23/12	8/8/17	Contig	Institute for Genome Sciences	SAMN00217325	GCA_000249835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/835/GCA_000249835.2_ASM24983v2	22582382	DEC8C
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36094	65.6	-	CIJU01	99	4287	4082	4/21/15	3/11/17	Contig	SC	SAMEA1317620	GCA_001350475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/475/GCA_001350475.1_7414_6_60	-	402251
Salmonella enterica subsp. diarizonae	59204	PRJNA275139	275139	Proteobacteria	Gammaproteobacteria	4.83871	51.3	-	JZTR01	54	4772	4388	8/31/15	2/28/17	Contig	U.S. Food and Drug Administration	SAMN03339658	GCA_001276795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/795/GCA_001276795.1_ASM127679v1	26303940	50268
Staphylococcus aureus T86055	1411582	PRJNA224663	224663	Terrabacteria group	Firmicutes	2.84304	32.9	-	JDQW01	59	2968	2823	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384128	GCA_000564385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/385/GCA_000564385.1_Stap_aure_T86055_V1	-	T86055
Staphylococcus aureus W12628	1411583	PRJNA224664	224664	Terrabacteria group	Firmicutes	2.8585	32.8	-	JDQX01	28	3021	2854	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384129	GCA_000564405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/405/GCA_000564405.1_Stap_aure_W12628_V1	-	W12628
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA275139	275139	Proteobacteria	Gammaproteobacteria	4.82022	52.3	-	JZTK01	65	4848	4595	8/31/15	2/28/17	Contig	U.S. Food and Drug Administration	SAMN03339651	GCA_001276845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/845/GCA_001276845.1_ASM127684v1	26303940	50260
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36237	65.6	-	CHZA01	93	4282	4083	4/21/15	3/11/17	Contig	SC	SAMEA1317643	GCA_001350595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/595/GCA_001350595.1_7414_6_23	-	402206
Escherichia coli DEC8D	868173	PRJNA50985	50985	Proteobacteria	Gammaproteobacteria	5.46041	50.6	-	AIGI01	61	5884	5293	2/23/12	2/22/17	Contig	Institute for Genome Sciences	SAMN00190971	GCA_000249855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/855/GCA_000249855.2_ASM24985v2	22582382	DEC8D
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.12704	39.7	-	CVHB01	65	2286	1975	4/2/15	3/11/17	Contig	SC	SAMEA1022936	GCA_001334235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/235/GCA_001334235.1_6930_7_11	-	339
Klebsiella pneumoniae	573	PRJNA322421	322421	Proteobacteria	Gammaproteobacteria	5.75659	57	-	LYWX01	65	5820	5572	8/9/16	2/21/17	Scaffold	Zhejiang university	SAMN05172953	GCA_001701755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/755/GCA_001701755.1_ASM170175v1	-	SKLX4211
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	7.00005	65.8	-	FRWT01	174	6773	6528	12/9/16	3/21/17	Contig	DTU	SAMEA2357722	GCA_900148325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/325/GCA_900148325.1_LRJ20	-	-
Acinetobacter baumannii	470	PRJEB12351	313175	Proteobacteria	Gammaproteobacteria	3.98936	38.9	-	FITR01	212	3900	3744	2/25/16	3/19/17	Contig	UNIVERSITY OF WARWICK	SAMEA3724634	GCA_900020545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/545/GCA_900020545.1_acinetobacter_baumannii_isolate_strainB	-	B
Acinetobacter baumannii	470	PRJEB12351	313175	Proteobacteria	Gammaproteobacteria	3.93849	38.9	-	FCNJ01	152	3839	3695	2/25/16	3/19/17	Contig	UNIVERSITY OF WARWICK	SAMEA3724638	GCA_900029355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/355/GCA_900029355.1_acinetobacter_baumannii_isolate_strainF	-	F
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.45578	66.3	-	FRWW01	302	6260	5928	12/9/16	3/21/17	Contig	DTU	SAMEA2357723	GCA_900148335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/335/GCA_900148335.1_M	-	-
Klebsiella pneumoniae	573	PRJNA322421	322421	Proteobacteria	Gammaproteobacteria	5.43014	57.2	-	LYWU01	99	5502	5207	8/9/16	2/21/17	Scaffold	Zhejiang university	SAMN05172948	GCA_001701765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/765/GCA_001701765.1_ASM170176v1	-	SKLX2891
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.10513	39.6	-	CIDO01	59	2298	2030	4/21/15	3/11/17	Contig	SC	SAMEA1022960	GCA_001334275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/275/GCA_001334275.1_6930_7_13	-	152
Escherichia coli DEC8E	868174	PRJNA50987	50987	Proteobacteria	Gammaproteobacteria	5.31835	50.4	-	AIGJ01	72	5758	5087	2/23/12	5/18/17	Contig	Institute for Genome Sciences	SAMN00190969	GCA_000249875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/875/GCA_000249875.2_ASM24987v2	22582382	DEC8E
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.38022	65.6	-	CIFG01	84	4289	4103	4/21/15	3/11/17	Contig	SC	SAMEA1317651	GCA_001350615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/615/GCA_001350615.1_7414_6_34	-	302203
Salmonella enterica subsp. enterica serovar Indiana	286783	PRJNA275139	275139	Proteobacteria	Gammaproteobacteria	4.71628	52.1	-	JZTS01	64	4765	4518	8/31/15	2/28/17	Contig	U.S. Food and Drug Administration	SAMN03339659	GCA_001276865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/865/GCA_001276865.1_ASM127686v1	26303940	50269
Staphylococcus aureus W15997	1411584	PRJNA224665	224665	Terrabacteria group	Firmicutes	2.86009	32.8	-	JDQY01	1	3003	2850	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384130	GCA_000564425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/425/GCA_000564425.1_Stap_aure_W15997_V1	-	W15997
Staphylococcus aureus W16001	1411585	PRJNA224666	224666	Terrabacteria group	Firmicutes	2.83188	32.8	-	JDQZ01	53	2967	2822	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384131	GCA_000564445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/445/GCA_000564445.1_Stap_aure_W16001_V1	-	W16001
Salmonella enterica subsp. diarizonae	59204	PRJNA275139	275139	Proteobacteria	Gammaproteobacteria	4.77143	51.3	-	JZTQ01	58	4700	4339	8/31/15	2/28/17	Contig	U.S. Food and Drug Administration	SAMN03339657	GCA_001276875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/875/GCA_001276875.1_ASM127687v1	26303940	50267
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.35909	65.6	-	CHJX01	100	4294	4081	4/21/15	3/11/17	Contig	SC	SAMEA1317672	GCA_001350655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/655/GCA_001350655.1_7414_6_35	-	400958
Escherichia coli DEC9A	868175	PRJNA50989	50989	Proteobacteria	Gammaproteobacteria	5.40845	50.6	-	AIGK01	80	5813	5228	2/23/12	2/22/17	Contig	Institute for Genome Sciences	SAMN00190967	GCA_000249895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/895/GCA_000249895.2_ASM24989v2	22582382	DEC9A
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.12852	39.7	-	CHWH01	70	2292	1977	4/21/15	3/11/17	Contig	SC	SAMEA1991757	GCA_001334295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/295/GCA_001334295.1_5756_5_4	-	267
Klebsiella pneumoniae	573	PRJNA322421	322421	Proteobacteria	Gammaproteobacteria	5.88615	56.7	-	LYWT01	124	5993	5706	8/9/16	2/21/17	Scaffold	Zhejiang university	SAMN05172944	GCA_001701795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/701/795/GCA_001701795.1_ASM170179v1	-	SKLX2848
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.40684	66.3	-	FRWZ01	440	6330	5865	12/9/16	3/21/17	Contig	DTU	SAMEA2357724	GCA_900148345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/345/GCA_900148345.1_N	-	-
Acinetobacter baumannii	470	PRJEB12351	313175	Proteobacteria	Gammaproteobacteria	3.99621	38.9	-	FCNE01	302	3911	3738	2/25/16	3/19/17	Contig	UNIVERSITY OF WARWICK	SAMEA3724643	GCA_900029365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/365/GCA_900029365.1_acinetobacter_baumannii_isolate_strainL	-	L
Acinetobacter baumannii	470	PRJEB12351	313175	Proteobacteria	Gammaproteobacteria	3.98481	38.9	-	FCNK01	164	3895	3745	2/25/16	3/19/17	Contig	UNIVERSITY OF WARWICK	SAMEA3724640	GCA_900029375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/375/GCA_900029375.1_acinetobacter_baumannii_isolate_strainI	-	I
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.45285	66.3	-	FRWX01	335	6272	5916	12/9/16	3/21/17	Contig	DTU	SAMEA2357725	GCA_900148355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/355/GCA_900148355.1_NA10	-	-
Klebsiella pneumoniae	573	PRJNA314324	314324	Proteobacteria	Gammaproteobacteria	5.67756	57.1	-	LUFA01	450	5712	5037	8/18/16	2/22/17	Scaffold	University of Texas Southwestern Medical Center	SAMN04532005	GCA_001707135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/135/GCA_001707135.1_ASM170713v1	27402393	UTSW Atlanta 01
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15272	39.4	-	CFFC01	60	2338	2122	3/15/15	3/11/17	Contig	SC	SAMEA1023678	GCA_001334415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/415/GCA_001334415.1_6673_8_10	-	SMRU250
Escherichia coli DEC9B	868176	PRJNA50991	50991	Proteobacteria	Gammaproteobacteria	5.3616	50.7	-	AIGL01	64	5733	5161	2/23/12	2/22/17	Contig	Institute for Genome Sciences	SAMN00190968	GCA_000249915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/915/GCA_000249915.2_ASM24991v2	22582382	DEC9B
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.38692	65.6	-	CVKO01	100	4293	4128	4/2/15	3/11/17	Contig	SC	SAMEA1523361	GCA_001350695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/695/GCA_001350695.1_8080_8_16	-	201457
Salmonella enterica subsp. enterica serovar Montevideo	115981	PRJNA275139	275139	Proteobacteria	Gammaproteobacteria	5.06097	51.9	-	JZTT01	67	5187	4905	8/31/15	2/28/17	Contig	U.S. Food and Drug Administration	SAMN03339660	GCA_001276905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/905/GCA_001276905.1_ASM127690v1	26303940	50270
Staphylococcus aureus W16013	1411586	PRJNA224667	224667	Terrabacteria group	Firmicutes	2.82343	32.8	-	JDRA01	50	2950	2823	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384132	GCA_000564465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/465/GCA_000564465.1_Stap_aure_W16013_V1	-	W16013
Staphylococcus aureus W21932	1411587	PRJNA224668	224668	Terrabacteria group	Firmicutes	2.72801	32.7	-	JDRB01	62	2834	2637	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384133	GCA_000564485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/485/GCA_000564485.1_Stap_aure_W21932_V1	-	W21932
Salmonella enterica subsp. enterica serovar Senftenberg	28150	PRJNA275139	275139	Proteobacteria	Gammaproteobacteria	5.14846	51.7	-	JZTV01	70	5269	4980	8/31/15	2/28/17	Contig	U.S. Food and Drug Administration	SAMN03339662	GCA_001276925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/925/GCA_001276925.1_ASM127692v1	26303940	50272
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36355	65.6	-	CGBS01	111	4295	4083	3/15/15	3/11/17	Contig	SC	SAMEA1523364	GCA_001350715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/715/GCA_001350715.1_8080_8_22	-	1300325
Escherichia coli DEC9C	868177	PRJNA50993	50993	Proteobacteria	Gammaproteobacteria	5.19472	50.7	-	AIGM01	66	5542	5024	2/23/12	5/18/17	Contig	Institute for Genome Sciences	SAMN00190970	GCA_000249935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/935/GCA_000249935.2_ASM24993v2	22582382	DEC9C
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.05474	39.5	-	CHOD01	39	2250	2020	4/21/15	3/11/17	Contig	SC	SAMEA1023701	GCA_001334555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/555/GCA_001334555.1_6631_2_14	-	type strain: N
Klebsiella pneumoniae	573	PRJNA349219	349219	Proteobacteria	Gammaproteobacteria	5.52043	57.2	-	MNAK01	83	5580	5341	1/9/17	2/22/17	Scaffold	Fifth Affiliated Hospital of Wenzhou Medical University	SAMN05928592	GCA_001939845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/845/GCA_001939845.1_ASM193984v1	27965935	XL-1
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.4517	66.3	-	FRXA01	345	6289	5919	12/9/16	3/21/17	Contig	DTU	SAMEA2357727	GCA_900148365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/365/GCA_900148365.1_NA31	-	-
Acinetobacter baumannii	470	PRJEB12351	313175	Proteobacteria	Gammaproteobacteria	3.87812	39.1	-	FCNC01	821	4079	3531	2/25/16	3/19/17	Contig	UNIVERSITY OF WARWICK	SAMEA3724635	GCA_900031715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/715/GCA_900031715.1_acinetobacter_baumannii_isolate_strainC	-	C
Acinetobacter baumannii	470	PRJEB12351	313175	Proteobacteria	Gammaproteobacteria	3.98613	38.9	-	FCNF01	223	3912	3744	2/25/16	3/19/17	Contig	UNIVERSITY OF WARWICK	SAMEA3724639	GCA_900042755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/755/GCA_900042755.1_acinetobacter_baumannii_isolate_strainG	-	G
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.46546	66.3	-	FRXB01	269	6254	5945	12/9/16	3/21/17	Contig	DTU	SAMEA2357726	GCA_900148375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/375/GCA_900148375.1_NA11	-	-
Klebsiella pneumoniae	573	PRJNA349219	349219	Proteobacteria	Gammaproteobacteria	5.60637	57.1	-	MNAI01	54	5608	5355	1/9/17	2/22/17	Scaffold	Fifth Affiliated Hospital of Wenzhou Medical University	SAMN05928590	GCA_001939885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/885/GCA_001939885.1_ASM193988v1	27965935	GN-2
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.08265	39.6	-	CGWG01	122	2275	2058	4/21/15	3/5/17	Contig	SC	SAMEA1023743	GCA_001334715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/715/GCA_001334715.1_6673_8_7	-	SMRU247
Escherichia coli DEC9D	868178	PRJNA50995	50995	Proteobacteria	Gammaproteobacteria	5.48562	50.7	-	AIGN01	65	5900	5353	2/23/12	2/22/17	Contig	Institute for Genome Sciences	SAMN00190986	GCA_000249955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/955/GCA_000249955.2_ASM24995v2	22582382	DEC9D
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.37609	65.6	-	CHZD01	83	4296	4092	4/21/15	3/11/17	Contig	SC	SAMEA1523372	GCA_001350815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/815/GCA_001350815.1_8080_8_23	-	1300215
"Salmonella enterica subsp. enterica serovar 4,12:i:-"	353569	PRJNA287311	287311	Proteobacteria	Gammaproteobacteria	4.93412	52.2	-	LJJK01	250	5180	4839	9/18/15	2/28/17	Contig	Istituto Superiore di Sanita	SAMN03780462	GCA_001293585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/293/585/GCA_001293585.1_ASM129358v1	-	STM3910
Staphylococcus aureus W21940	1411588	PRJNA224669	224669	Terrabacteria group	Firmicutes	2.78752	32.8	-	JDRC01	43	2898	2746	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384134	GCA_000564505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/505/GCA_000564505.1_Stap_aure_W21940_V1	-	W21940
Staphylococcus aureus W21945	1411589	PRJNA224670	224670	Terrabacteria group	Firmicutes	2.8292	32.8	-	JDRD01	70	2965	2817	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384135	GCA_000564525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/525/GCA_000564525.1_Stap_aure_W21945_V1	-	W21945
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA264258	264258	Proteobacteria	Gammaproteobacteria	5.08349	51.9	-	JRYU01	63	5200	4964	9/22/15	2/28/17	Contig	The Chinese University of Hong Kong	SAMN03120582	GCA_001295385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/385/GCA_001295385.1_ASM129538v1	26370680	ST4024
Mycobacterium tuberculosis	1773	PRJEB7991	270273	Terrabacteria group	Actinobacteria	4.14501	65.2	-	CVMY01	15	4197	3819	4/21/15	3/11/17	Contig	URMITE	SAMEA3354378	GCA_001372235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/372/235/GCA_001372235.1_PRJEB7991_assembly_1	-	tahitimassiliensis MT43
Escherichia coli DEC9E	868179	PRJNA50997	50997	Proteobacteria	Gammaproteobacteria	5.43077	50.7	-	AIGO01	68	5843	5207	2/23/12	3/5/17	Contig	Institute for Genome Sciences	SAMN00217320	GCA_000249975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/975/GCA_000249975.2_ASM24997v2	22582382	DEC9E
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10091	39.6	-	CHNV01	67	2318	2088	4/21/15	3/5/17	Contig	SC	SAMEA1023764	GCA_001334795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/795/GCA_001334795.1_6631_2_6	-	4
Klebsiella pneumoniae	573	PRJNA356818	356818	Proteobacteria	Gammaproteobacteria	5.14617	57.8	-	MRVH01	44	5133	4781	1/23/17	2/22/17	Scaffold	I.N.Blokhina Research Institute of Epidemiology and Microbiology	SAMN06127797	GCA_001969905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/969/905/GCA_001969905.1_ASM196990v1	-	59
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.42009	66.3	-	FRXC01	423	6320	5872	12/9/16	3/21/17	Contig	DTU	SAMEA2357728	GCA_900148385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/385/GCA_900148385.1_O	-	-
Acinetobacter baumannii	470	PRJEB12351	313175	Proteobacteria	Gammaproteobacteria	3.98118	38.9	-	FCNH01	122	3898	3749	2/25/16	3/19/17	Contig	UNIVERSITY OF WARWICK	SAMEA3724641	GCA_900043985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/985/GCA_900043985.1_acinetobacter_baumannii_isolate_strainJ	-	J
Acinetobacter baumannii	470	PRJEB12351	313175	Proteobacteria	Gammaproteobacteria	3.97861	38.9	-	FCNI01	183	3884	3732	2/25/16	3/19/17	Contig	UNIVERSITY OF WARWICK	SAMEA3724642	GCA_900043995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/995/GCA_900043995.1_acinetobacter_baumannii_isolate_strainK	-	K
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.45172	66.3	-	FRXD01	319	6260	5925	12/9/16	3/21/17	Contig	DTU	SAMEA2357729	GCA_900148395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/395/GCA_900148395.1_P	-	-
Klebsiella pneumoniae	573	PRJNA357339	357339	Proteobacteria	Gammaproteobacteria	4.87378	58	-	MRYL01	61	4830	4491	1/24/17	2/22/17	Scaffold	I.N.Blokhina Research Institute of Epidemiology and Microbiology	SAMN06140912	GCA_001970155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/970/155/GCA_001970155.1_ASM197015v1	-	KP254
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.12928	39.6	-	CFDT01	77	2353	2076	3/15/15	3/15/17	Contig	SC	SAMEA1023781	GCA_001334855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/855/GCA_001334855.1_6631_4_19	-	type strain: N
Escherichia coli DEC10A	868180	PRJNA50999	50999	Proteobacteria	Gammaproteobacteria	5.36817	50.6	-	AIGP01	76	5864	5107	2/23/12	8/8/17	Contig	Institute for Genome Sciences	SAMN00190964	GCA_000249995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/995/GCA_000249995.2_ASM24999v2	22582382	DEC10A
Mycobacterium tuberculosis	1773	PRJEB8877	278953	Terrabacteria group	Actinobacteria	4.11029	65.1	-	CVMX01	16	4198	3788	4/21/15	3/11/17	Contig	URMITE	SAMEA3354377	GCA_001375575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/575/GCA_001375575.1_PRJEB8877_assembly_1	-	tahitimassiliensis MT11
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA264261	264261	Proteobacteria	Gammaproteobacteria	4.97716	52.2	-	JRZX01	63	5122	4868	9/22/15	2/28/17	Contig	The Chinese University of Hong Kong	SAMN03121894	GCA_001295405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/405/GCA_001295405.1_ASM129540v1	26370680	ST111849
Staphylococcus aureus W52104	1411590	PRJNA224671	224671	Terrabacteria group	Firmicutes	2.85636	32.8	-	JDRE01	69	3019	2835	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384136	GCA_000564545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/545/GCA_000564545.1_Stap_aure_W52104_V1	-	W52104
Staphylococcus aureus W52117	1411591	PRJNA224672	224672	Terrabacteria group	Firmicutes	2.82399	32.8	-	JDRF01	46	2964	2795	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384137	GCA_000564565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/565/GCA_000564565.1_Stap_aure_W52117_V1	-	W52117
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA264259	264259	Proteobacteria	Gammaproteobacteria	5.12298	52	-	JRZV01	133	5304	4987	9/22/15	2/28/17	Contig	The Chinese University of Hong Kong	SAMN03121896	GCA_001295415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/415/GCA_001295415.1_ASM129541v1	26370680	ST2850
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3656	65.6	-	COGN01	109	4279	4075	3/22/15	3/11/17	Contig	SC	SAMEA1015933	GCA_001375775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/775/GCA_001375775.1_6954_1_68	-	0611Q
Escherichia coli DEC10B	868181	PRJNA51001	51001	Proteobacteria	Gammaproteobacteria	5.57845	50.5	-	AIGQ01	78	6116	5305	2/23/12	8/8/17	Contig	Institute for Genome Sciences	SAMN00190966	GCA_000250015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/015/GCA_000250015.2_ASM25001v2	22582382	DEC10B
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10347	39.6	-	CHNZ01	73	2351	2103	4/21/15	3/5/17	Contig	SC	SAMEA1023795	GCA_001334935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/935/GCA_001334935.1_6631_5_8	-	33B
Klebsiella pneumoniae	573	PRJNA357350	357350	Proteobacteria	Gammaproteobacteria	5.17637	57.8	-	MRYM01	37	5185	4827	1/24/17	2/22/17	Scaffold	I.N.Blokhina Research Institute of Epidemiology and Microbiology	SAMN06140973	GCA_001970165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/970/165/GCA_001970165.1_ASM197016v1	-	KP1083
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.38393	66.3	-	FRXE01	504	6356	5822	12/9/16	3/21/17	Contig	DTU	SAMEA2357730	GCA_900148405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/405/GCA_900148405.1_Q	-	-
Acinetobacter baumannii	470	PRJEB12351	313175	Proteobacteria	Gammaproteobacteria	3.98079	38.9	-	FJMY01	161	3901	3738	2/25/16	3/19/17	Contig	UNIVERSITY OF WARWICK	SAMEA3724644	GCA_900067075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/067/075/GCA_900067075.1_acinetobacter_baumannii_isolate_strainM	-	M
Acinetobacter baumannii	470	PRJEB15065	350436	Proteobacteria	Gammaproteobacteria	3.90253	39	-	FPEF01	196	3811	3639	11/7/16	3/20/17	Contig	Faculty of medecine and pharmacy RABAT	SAMEA4535140	GCA_900117405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/405/GCA_900117405.1_ABE12_M	-	ABE12_M
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.42056	66.3	-	FRXF01	426	6307	5876	12/9/16	3/21/17	Contig	DTU	SAMEA2357731	GCA_900148415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/415/GCA_900148415.1_R	-	-
Klebsiella pneumoniae	573	PRJNA357543	357543	Proteobacteria	Gammaproteobacteria	5.14506	57.8	-	MRYN01	60	5150	4788	1/24/17	2/22/17	Scaffold	I.N.Blokhina Research Institute of Epidemiology and Microbiology	SAMN06143022	GCA_001970175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/970/175/GCA_001970175.1_ASM197017v1	-	KP314
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.08079	39.7	-	CHGQ01	80	2297	2092	4/21/15	3/5/17	Contig	SC	SAMEA1023813	GCA_001334975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/975/GCA_001334975.1_6631_2_17	-	34
Escherichia coli DEC10C	868182	PRJNA51003	51003	Proteobacteria	Gammaproteobacteria	5.5311	50.6	-	AIGR01	60	6095	5317	2/23/12	8/8/17	Contig	Institute for Genome Sciences	SAMN00190940	GCA_000250035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/035/GCA_000250035.2_ASM25003v2	22582382	DEC10C
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36267	65.6	-	COHW01	109	4287	4081	3/23/15	3/11/17	Contig	SC	SAMEA1015941	GCA_001375855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/855/GCA_001375855.1_6954_7_29	-	0828B
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA264255	264255	Proteobacteria	Gammaproteobacteria	4.73516	52.1	-	JRYT01	47	4815	4600	9/22/15	2/28/17	Contig	The Chinese University of Hong Kong	SAMN03120578	GCA_001295425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/425/GCA_001295425.1_ASM129542v1	26370680	ST728
Staphylococcus aureus W52120	1411592	PRJNA224673	224673	Terrabacteria group	Firmicutes	2.82025	32.8	-	JDRG01	50	2930	2787	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384138	GCA_000564585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/585/GCA_000564585.1_Stap_aure_W52120_V1	-	W52120
Staphylococcus aureus W55442	1411593	PRJNA224674	224674	Terrabacteria group	Firmicutes	2.83697	32.7	-	JDRH01	58	2959	2803	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384139	GCA_000564605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/605/GCA_000564605.1_Stap_aure_W55442_V1	-	W55442
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA264266	264266	Proteobacteria	Gammaproteobacteria	5.01001	51.8	-	JRZR01	51	5140	4904	9/22/15	2/28/17	Contig	The Chinese University of Hong Kong	SAMN03121899	GCA_001295465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/465/GCA_001295465.1_ASM129546v1	26370680	ST2286
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37092	65.6	-	COHC01	101	4287	4105	3/23/15	3/11/17	Contig	SC	SAMEA1015944	GCA_001375895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/895/GCA_001375895.1_6954_1_87	-	0028G
Escherichia coli DEC10D	868183	PRJNA51005	51005	Proteobacteria	Gammaproteobacteria	5.40407	50.6	-	AIGS01	61	5878	5092	2/23/12	8/8/17	Contig	Institute for Genome Sciences	SAMN00190939	GCA_000250055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/055/GCA_000250055.2_ASM25005v2	22582382	DEC10D
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.0398	39.7	-	CHPS01	38	2238	2027	4/21/15	3/5/17	Contig	SC	SAMEA1023823	GCA_001335015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/015/GCA_001335015.1_6680_8_16	-	SMRU208
Klebsiella pneumoniae	573	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.41988	57.3	-	NCRZ01	23	5366	5125	4/12/17	4/16/17	Scaffold	Broad Institute	SAMN04606419	GCA_002087495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/495/GCA_002087495.1_ASM208749v1	-	OS_09_011_10
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.44136	66.3	-	FRXH01	368	6313	5900	12/9/16	3/21/17	Contig	DTU	SAMEA2357732	GCA_900148425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/425/GCA_900148425.1_S	-	-
Acinetobacter baumannii	470	PRJEB17689	352807	Proteobacteria	Gammaproteobacteria	3.89808	39	-	FPKN01	187	3834	3660	11/17/16	5/31/17	Contig	Faculty of medecine and pharmacy RABAT	SAMEA4542489	GCA_900119395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/119/395/GCA_900119395.1_ASM90011939v1	-	ABE8_07
Acinetobacter baumannii	470	PRJEB19200	369503	Proteobacteria	Gammaproteobacteria	4.0562	39	-	FTRX01	225	4014	3757	2/1/17	3/22/17	Contig	Lausanne University Hospital	SAMEA54518668	GCA_900157395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/395/GCA_900157395.1_H31506	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.40726	66.3	-	FRXG01	467	6325	5867	12/9/16	3/21/17	Contig	DTU	SAMEA2357733	GCA_900148435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/435/GCA_900148435.1_T	-	-
Klebsiella pneumoniae	573	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.38114	57.3	-	NCSD01	22	5354	5125	4/12/17	4/16/17	Scaffold	Broad Institute	SAMN04606424	GCA_002087645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/645/GCA_002087645.1_ASM208764v1	-	OS_09_011_15
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11986	39.4	-	CGWC01	65	2323	2069	4/21/15	3/15/17	Contig	SC	SAMEA1023833	GCA_001335075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/075/GCA_001335075.1_6631_7_13	-	19F
Escherichia coli DEC10E	868184	PRJNA51007	51007	Proteobacteria	Gammaproteobacteria	5.16986	50.7	-	AIGT01	47	5498	4887	2/23/12	3/5/17	Contig	Institute for Genome Sciences	SAMN00190938	GCA_000250075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/075/GCA_000250075.2_ASM25007v2	22582382	DEC10E
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36462	65.6	-	COJP01	108	4285	4080	3/23/15	3/11/17	Contig	SC	SAMEA1015979	GCA_001376135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/135/GCA_001376135.1_6954_8_94	-	1605W
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA264267	264267	Proteobacteria	Gammaproteobacteria	4.81711	52.1	-	JRZQ01	35	4923	4690	9/22/15	2/28/17	Contig	The Chinese University of Hong Kong	SAMN03121903	GCA_001295485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/485/GCA_001295485.1_ASM129548v1	26370680	ST486
Staphylococcus aureus W55446	1411594	PRJNA224675	224675	Terrabacteria group	Firmicutes	2.83233	32.8	-	JDRI01	68	2954	2811	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384140	GCA_000564625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/625/GCA_000564625.1_Stap_aure_W55446_V1	-	W55446
Staphylococcus aureus W55451	1411595	PRJNA224676	224676	Terrabacteria group	Firmicutes	2.83693	32.8	-	JDRJ01	73	2959	2809	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384141	GCA_000564645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/645/GCA_000564645.1_Stap_aure_W55451_V1	-	W55451
Salmonella enterica subsp. enterica serovar Typhimurium str. ST1489	1365218	PRJNA264269	264269	Proteobacteria	Gammaproteobacteria	4.76152	52.1	-	JRZO01	120	4865	4597	9/22/15	2/28/17	Contig	The Chinese University of Hong Kong	SAMN03121904	GCA_001295495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/495/GCA_001295495.1_ASM129549v1	26370680	ST1489
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37746	65.6	-	COJQ01	83	4295	4101	3/23/15	3/11/17	Contig	SC	SAMEA1015980	GCA_001376155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/155/GCA_001376155.1_6954_8_96	-	0159Z
Escherichia coli DEC10F	868185	PRJNA51009	51009	Proteobacteria	Gammaproteobacteria	5.76431	50.4	-	AIGU01	91	6263	5641	2/23/12	2/22/17	Contig	Institute for Genome Sciences	SAMN00199322	GCA_000250095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/095/GCA_000250095.2_ASM25009v2	22582382	DEC10F
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.13418	39.6	-	CHOX01	57	2313	2096	4/21/15	3/5/17	Contig	SC	SAMEA1023873	GCA_001335195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/195/GCA_001335195.1_6664_1_13	-	6B
Klebsiella pneumoniae	573	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.39577	57.3	-	NCSB01	25	5374	5115	4/12/17	4/16/17	Scaffold	Broad Institute	SAMN04606422	GCA_002087715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/715/GCA_002087715.1_ASM208771v1	-	OS_09_011_14
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.44582	66.3	-	FRXI01	301	6260	5911	12/9/16	3/21/17	Contig	DTU	SAMEA2357734	GCA_900148445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/445/GCA_900148445.1_U	-	-
Acinetobacter baumannii	470	PRJEB19200	369503	Proteobacteria	Gammaproteobacteria	3.94117	38.9	-	FTRW01	128	3817	3653	2/1/17	3/22/17	Contig	Lausanne University Hospital	SAMEA54517918	GCA_900157405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/157/405/GCA_900157405.1_H31499	-	-
Acinetobacter baumannii	470	PRJEB19248	384892	Proteobacteria	Gammaproteobacteria	4.01562	39	-	FUEK01	91	3831	3669	4/30/17	5/6/17	Contig	UNIMI	SAMEA70020418	GCA_900161875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/161/875/GCA_900161875.1_68SM01	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.44594	66.3	-	FRXK01	298	6261	5914	12/9/16	3/21/17	Contig	DTU	SAMEA2357735	GCA_900148455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/455/GCA_900148455.1_V	-	-
Klebsiella pneumoniae	573	PRJNA347546	347546	Proteobacteria	Gammaproteobacteria	5.6961	57	-	MLQU01	92	5765	5484	4/14/17	4/21/17	Scaffold	"Emerging Pathogens Institute, University of Florida,"	SAMN05892170	GCA_002093155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/155/GCA_002093155.1_ASM209315v1	28403683	Kleb_Syr
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07506	39.7	-	CGWA01	55	2290	2084	4/21/15	3/5/17	Contig	SC	SAMEA1023877	GCA_001335215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/215/GCA_001335215.1_6631_1_17	-	34
Escherichia coli DEC11A	868186	PRJNA51011	51011	Proteobacteria	Gammaproteobacteria	5.21587	50.6	-	AIGV01	56	5536	5102	2/23/12	2/22/17	Contig	Institute for Genome Sciences	SAMN00199323	GCA_000250115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/115/GCA_000250115.2_ASM25011v2	22582382	DEC11A
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36196	65.6	-	COHK01	111	4285	4076	3/23/15	3/11/17	Contig	SC	SAMEA1015982	GCA_001376175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/175/GCA_001376175.1_6954_7_16	-	0937V
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA264275	264275	Proteobacteria	Gammaproteobacteria	4.90242	51.9	-	JRZI01	83	4991	4759	9/22/15	2/28/17	Contig	The Chinese University of Hong Kong	SAMN03121891	GCA_001295525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/525/GCA_001295525.1_ASM129552v1	26370680	ST3858
Staphylococcus aureus W58473	1411596	PRJNA224677	224677	Terrabacteria group	Firmicutes	2.84313	32.8	-	JDRK01	57	2961	2809	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384142	GCA_000564665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/665/GCA_000564665.1_Stap_aure_W58473_V1	-	W58473
Staphylococcus aureus W64953	1411598	PRJNA224679	224679	Terrabacteria group	Firmicutes	2.84851	32.8	-	JDRL01	60	2982	2833	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384144	GCA_000564685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/685/GCA_000564685.1_Stap_aure_W64953_V1	-	W64953
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA264263	264263	Proteobacteria	Gammaproteobacteria	5.08584	52	-	JRZU01	67	5251	4905	9/22/15	2/28/17	Contig	The Chinese University of Hong Kong	SAMN03121905	GCA_001295545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/545/GCA_001295545.1_ASM129554v1	26370680	ST8493
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36282	65.6	-	COIO01	104	4282	4078	3/22/15	3/11/17	Contig	SC	SAMEA1015986	GCA_001376215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/215/GCA_001376215.1_6954_8_50	-	0915W
Escherichia coli DEC11B	868187	PRJNA51013	51013	Proteobacteria	Gammaproteobacteria	5.23087	50.7	-	AIGW01	49	5565	5146	2/23/12	2/22/17	Contig	Institute for Genome Sciences	SAMN00199316	GCA_000250135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/135/GCA_000250135.2_ASM25013v2	22582382	DEC11B
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15428	39.5	-	CIHB01	71	2392	2162	4/21/15	3/11/17	Contig	SC	SAMEA1023879	GCA_001335235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/235/GCA_001335235.1_6631_6_9	-	6A
Klebsiella pneumoniae	573	PRJNA339728	339728	Proteobacteria	Gammaproteobacteria	5.5173	57.2	-	MDUJ01	58	5485	5248	4/21/17	4/24/17	Scaffold	"National Institute of Health, Portugal"	SAMN05603853	GCA_002102635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/635/GCA_002102635.1_ASM210263v1	28368366	Kp703
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.42749	66.3	-	FRXJ01	327	6266	5895	12/9/16	3/21/17	Contig	DTU	SAMEA2357736	GCA_900148465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/465/GCA_900148465.1_X	-	-
Acinetobacter baumannii	470	PRJEB19248	384892	Proteobacteria	Gammaproteobacteria	3.98408	39	-	FUEM01	147	3791	3619	4/30/17	5/6/17	Contig	UNIMI	SAMEA70023418	GCA_900161885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/161/885/GCA_900161885.1_103SM	-	-
Acinetobacter baumannii	470	PRJEB19248	384892	Proteobacteria	Gammaproteobacteria	3.96109	39	-	FUEN01	177	3786	3612	4/30/17	5/6/17	Contig	UNIMI	SAMEA70024168	GCA_900161895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/161/895/GCA_900161895.1_14336	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.44667	66.3	-	FRXL01	310	6268	5914	12/9/16	3/21/17	Contig	DTU	SAMEA2357737	GCA_900148475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/475/GCA_900148475.1_Y	-	-
Klebsiella pneumoniae	573	PRJNA339728	339728	Proteobacteria	Gammaproteobacteria	5.49342	57.4	-	MDUK01	62	5493	5228	4/21/17	4/24/17	Scaffold	"National Institute of Health, Portugal"	SAMN05603854	GCA_002102655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/655/GCA_002102655.1_ASM210265v1	28368366	Kp45
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14607	39.5	-	CHOC01	97	2391	2133	4/21/15	3/11/17	Contig	SC	SAMEA1023907	GCA_001335295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/295/GCA_001335295.1_6631_5_3	-	14
Escherichia coli DEC11C	868188	PRJNA51015	51015	Proteobacteria	Gammaproteobacteria	5.55148	50.6	-	AIGX01	88	6122	5367	2/23/12	8/8/17	Contig	Institute for Genome Sciences	SAMN00199082	GCA_000250155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/155/GCA_000250155.2_ASM25015v2	22582382	DEC11C
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36286	65.6	-	COJN01	81	4272	4086	3/23/15	3/11/17	Contig	SC	SAMEA1015989	GCA_001376275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/275/GCA_001376275.1_6954_8_93	-	1604V
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA264262	264262	Proteobacteria	Gammaproteobacteria	5.01163	52.2	-	JRZW01	60	5160	4856	9/22/15	2/28/17	Contig	The Chinese University of Hong Kong	SAMN03121902	GCA_001295555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/555/GCA_001295555.1_ASM129555v1	26370680	ST6988
Staphylococcus aureus W68479	1411599	PRJNA224680	224680	Terrabacteria group	Firmicutes	2.84735	32.8	-	JDRM01	66	2968	2818	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384145	GCA_000564715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/715/GCA_000564715.1_Stap_aure_W68479_V1	-	W68479
Staphylococcus aureus W85432	1411600	PRJNA224681	224681	Terrabacteria group	Firmicutes	2.77791	32.8	-	JDRN01	73	2885	2731	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384146	GCA_000564735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/735/GCA_000564735.1_Stap_aure_W85432_V1	-	W85432
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA264265	264265	Proteobacteria	Gammaproteobacteria	5.00102	52.2	-	JRZS01	49	5157	4891	9/22/15	2/28/17	Contig	The Chinese University of Hong Kong	SAMN03121897	GCA_001295595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/595/GCA_001295595.1_ASM129559v1	26370680	ST1660
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36555	65.6	-	COGZ01	117	4281	4081	3/23/15	3/11/17	Contig	SC	SAMEA1015991	GCA_001376315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/315/GCA_001376315.1_6954_1_83	-	0317W
Escherichia coli DEC11D	868189	PRJNA51017	51017	Proteobacteria	Gammaproteobacteria	5.30488	50.6	-	AIGY01	56	5674	5067	2/23/12	3/5/17	Contig	Institute for Genome Sciences	SAMN00199069	GCA_000250175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/175/GCA_000250175.2_ASM25017v2	22582382	DEC11D
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.13345	39.5	-	CHOK01	48	2376	2135	4/21/15	3/11/17	Contig	SC	SAMEA1023937	GCA_001335375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/375/GCA_001335375.1_6631_4_24	-	35C
Klebsiella pneumoniae	573	PRJNA339728	339728	Proteobacteria	Gammaproteobacteria	5.74505	57.2	-	MDUL01	217	5820	5275	4/21/17	4/24/17	Scaffold	"National Institute of Health, Portugal"	SAMN05604756	GCA_002102665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/102/665/GCA_002102665.1_ASM210266v1	28368366	Kp2948
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	6.46278	66.3	-	FRXM01	278	6253	5924	12/9/16	3/21/17	Contig	DTU	SAMEA2357738	GCA_900148485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/485/GCA_900148485.1_Z	-	-
Acinetobacter baumannii	470	PRJEB19248	384892	Proteobacteria	Gammaproteobacteria	4.0288	39	-	FUEX01	121	3834	3677	4/30/17	5/6/17	Contig	UNIMI	SAMEA70015168	GCA_900161905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/161/905/GCA_900161905.1_2MG	-	-
Acinetobacter baumannii	470	PRJEB19248	384892	Proteobacteria	Gammaproteobacteria	4.0262	38.9	-	FUEY01	167	3873	3706	4/30/17	5/6/17	Contig	UNIMI	SAMEA70016668	GCA_900161915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/161/915/GCA_900161915.1_5MO	-	-
Pseudomonas aeruginosa DSM 50071 = NBRC 12689	1123015	PRJEB19572	376355	Proteobacteria	Gammaproteobacteria	6.28349	66.5	-	FUXR01	85	5998	5824	3/4/17	6/13/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN02745748	GCA_900167195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/167/195/GCA_900167195.1_IMG-taxon_2568526011_annotated_assembly	-	DSM 50071
Klebsiella pneumoniae	573	PRJNA356165	356165	Proteobacteria	Gammaproteobacteria	5.62031	57	-	MSLD01	209	5756	5443	4/21/17	4/24/17	Scaffold	University of Minnesota	SAMN06107577	GCA_002103515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/515/GCA_002103515.1_ASM210351v1	-	MNCRE82
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.02379	39.8	-	CFEV01	55	2228	2009	3/15/15	3/11/17	Contig	SC	SAMEA1023958	GCA_001335455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/455/GCA_001335455.1_6631_3_24	-	17F
Escherichia coli DEC11E	868190	PRJNA51019	51019	Proteobacteria	Gammaproteobacteria	5.12545	50.6	-	AIGZ01	46	5482	4943	2/23/12	5/18/17	Contig	Institute for Genome Sciences	SAMN00199068	GCA_000250195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/195/GCA_000250195.2_ASM25019v2	22582382	DEC11E
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35717	65.6	-	COHH01	120	4282	4078	3/23/15	3/11/17	Contig	SC	SAMEA1016010	GCA_001376515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/515/GCA_001376515.1_6954_7_15	-	0932P
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA264270	264270	Proteobacteria	Gammaproteobacteria	4.70546	52.2	-	JRZN01	107	4770	4518	9/22/15	2/28/17	Contig	The Chinese University of Hong Kong	SAMN03121900	GCA_001295635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/635/GCA_001295635.1_ASM129563v1	26370680	ST4650
Staphylococcus aureus W85440	1411601	PRJNA224682	224682	Terrabacteria group	Firmicutes	2.87291	32.8	-	JDRO01	2	3023	2868	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384147	GCA_000564755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/755/GCA_000564755.1_Stap_aure_W85440_V1	-	W85440
Staphylococcus aureus W88551	1411602	PRJNA224683	224683	Terrabacteria group	Firmicutes	2.73977	32.8	-	JDRP01	40	2824	2699	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384148	GCA_000564775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/775/GCA_000564775.1_Stap_aure_W88551_V1	-	W88551
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA264271	264271	Proteobacteria	Gammaproteobacteria	5.06522	52.2	-	JRZM01	110	5213	4956	9/22/15	2/28/17	Contig	The Chinese University of Hong Kong	SAMN03121892	GCA_001295665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/665/GCA_001295665.1_ASM129566v1	26370680	ST2143
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35577	65.6	-	COJJ01	115	4285	4079	3/23/15	3/11/17	Contig	SC	SAMEA1016028	GCA_001376715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/715/GCA_001376715.1_6954_8_91	-	1558V
Escherichia coli DEC12A	868191	PRJNA51021	51021	Proteobacteria	Gammaproteobacteria	5.36155	50.5	-	AIHA01	81	5843	5160	2/23/12	3/5/17	Contig	Institute for Genome Sciences	SAMN00199081	GCA_000250215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/215/GCA_000250215.2_ASM25021v2	22582382	DEC12A
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.23972	39.5	-	CGWB01	89	2475	2218	4/21/15	3/11/17	Contig	SC	SAMEA1024001	GCA_001335535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/535/GCA_001335535.1_6631_6_17	-	6B
Klebsiella pneumoniae	573	PRJNA356165	356165	Proteobacteria	Gammaproteobacteria	5.66402	57	-	MSLC01	143	5795	5518	4/21/17	4/24/17	Scaffold	University of Minnesota	SAMN06107576	GCA_002103525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/525/GCA_002103525.1_ASM210352v1	-	MNCRE80
Pseudomonas aeruginosa B3-208	1365009	PRJEB4310	214878	Proteobacteria	Gammaproteobacteria	6.72935	66.2	-	CBMT01	418	6499	6145	8/11/13	3/15/17	Scaffold	DTU	SAMEA2272348	GCA_000455405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/405/GCA_000455405.1_B3-208	-	B3-208
Acinetobacter baumannii	470	PRJEB19248	384892	Proteobacteria	Gammaproteobacteria	4.01017	39	-	FUEP01	119	3819	3647	4/30/17	5/6/17	Contig	UNIMI	SAMEA70022668	GCA_900161925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/161/925/GCA_900161925.1_96SM	-	-
Acinetobacter baumannii	470	PRJEB19248	384892	Proteobacteria	Gammaproteobacteria	4.00252	39	-	FUEO01	114	3821	3656	4/30/17	5/6/17	Contig	UNIMI	SAMEA70024918	GCA_900161935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/161/935/GCA_900161935.1_MGTN	-	-
Pseudomonas aeruginosa B3-20M	1365010	PRJEB4311	214880	Proteobacteria	Gammaproteobacteria	6.72769	66.2	-	CBMU01	338	6481	6142	8/11/13	3/15/17	Scaffold	DTU	SAMEA2272763	GCA_000455505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/505/GCA_000455505.1_B3-20M	-	B3-20M
Klebsiella pneumoniae	573	PRJNA356165	356165	Proteobacteria	Gammaproteobacteria	5.70616	56.9	-	MSLE01	136	5805	5555	4/21/17	4/24/17	Scaffold	University of Minnesota	SAMN06107578	GCA_002103555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/555/GCA_002103555.1_ASM210355v1	-	MNCRE54
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.02182	39.6	-	CHNP01	59	2209	1989	4/21/15	3/11/17	Contig	SC	SAMEA1024037	GCA_001335655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/655/GCA_001335655.1_6631_2_4	-	35F
Escherichia coli DEC12B	868192	PRJNA51023	51023	Proteobacteria	Gammaproteobacteria	5.48899	50.6	-	AIHB01	78	6016	5344	2/23/12	3/5/17	Contig	Institute for Genome Sciences	SAMN00217321	GCA_000250235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/235/GCA_000250235.2_ASM25023v2	22582382	DEC12B
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36291	65.6	-	COHB01	93	4271	4089	3/23/15	3/11/17	Contig	SC	SAMEA1016030	GCA_001376735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/735/GCA_001376735.1_6954_1_85	-	0344A
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA264272	264272	Proteobacteria	Gammaproteobacteria	4.73874	52.1	-	JRZL01	115	4842	4589	9/22/15	2/28/17	Contig	The Chinese University of Hong Kong	SAMN03121895	GCA_001295675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/675/GCA_001295675.1_ASM129567v1	26370680	ST4329
Staphylococcus aureus W88555	1411603	PRJNA224684	224684	Terrabacteria group	Firmicutes	2.82852	32.8	-	JDRQ01	21	2965	2804	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384149	GCA_000564795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/795/GCA_000564795.1_Stap_aure_W88555_V1	-	W88555
Staphylococcus aureus W91963	1411604	PRJNA224685	224685	Terrabacteria group	Firmicutes	2.82904	32.8	-	JDRR01	59	2957	2807	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02384150	GCA_000564815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/815/GCA_000564815.1_Stap_aure_W91963_V1	-	W91963
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA264273	264273	Proteobacteria	Gammaproteobacteria	4.75046	52.2	-	JRZK01	53	4847	4627	9/22/15	2/28/17	Contig	The Chinese University of Hong Kong	SAMN03121906	GCA_001295705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/705/GCA_001295705.1_ASM129570v1	26370680	ST4038
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36284	65.6	-	COHU01	113	4287	4076	3/23/15	3/11/17	Contig	SC	SAMEA1016034	GCA_001376755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/755/GCA_001376755.1_6954_7_28	-	0818Q
Escherichia coli DEC12C	868193	PRJNA51025	51025	Proteobacteria	Gammaproteobacteria	5.44751	50.5	-	AIHC01	90	6009	5214	2/23/12	8/8/17	Contig	Institute for Genome Sciences	SAMN00199075	GCA_000250255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/255/GCA_000250255.2_ASM25025v2	22582382	DEC12C
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09391	39.8	-	CGWF01	61	2275	2013	4/21/15	3/11/17	Contig	SC	SAMEA1024073	GCA_001335755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/755/GCA_001335755.1_6673_8_2	-	SMRU242
Klebsiella pneumoniae	573	PRJNA356165	356165	Proteobacteria	Gammaproteobacteria	5.70492	56.9	-	MSLF01	146	5799	5538	4/21/17	4/24/17	Scaffold	University of Minnesota	SAMN06107579	GCA_002103565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/565/GCA_002103565.1_ASM210356v1	-	MNCRE60
Pseudomonas aeruginosa B3-1811	1365008	PRJEB4309	214882	Proteobacteria	Gammaproteobacteria	6.67983	66.2	-	CBMP01	341	6443	6117	8/11/13	3/15/17	Scaffold	DTU	SAMEA2272243	GCA_000455545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/545/GCA_000455545.1_B3-1811	-	B3-1811
Acinetobacter baumannii	470	PRJEB19248	384892	Proteobacteria	Gammaproteobacteria	4.02053	39.1	-	FUEL01	124	3841	3677	4/30/17	5/6/17	Contig	UNIMI	SAMEA70018918	GCA_900161945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/161/945/GCA_900161945.1_61SM01	-	-
Acinetobacter baumannii	470	PRJEB19248	384892	Proteobacteria	Gammaproteobacteria	4.0142	39.1	-	FUEQ01	240	3861	3651	4/30/17	5/6/17	Contig	UNIMI	SAMEA70017418	GCA_900161955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/161/955/GCA_900161955.1_20C15	-	-
Pseudomonas aeruginosa SG17M	1443105	PRJNA233421	233421	Proteobacteria	Gammaproteobacteria	6.87678	66.1	-	JALF01	17	6516	6301	2/10/14	3/9/17	Scaffold	Karolinska Institute	SAMN02951884	GCA_000568215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/215/GCA_000568215.1_ASM56821v1	24652978	SG17M
Klebsiella pneumoniae	573	PRJNA356165	356165	Proteobacteria	Gammaproteobacteria	5.70562	56.9	-	MSLG01	169	5815	5531	4/21/17	4/24/17	Scaffold	University of Minnesota	SAMN06107580	GCA_002103595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/595/GCA_002103595.1_ASM210359v1	-	MNCRE61
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.06572	39.6	-	CFBB01	53	2251	2029	3/15/15	3/11/17	Contig	SC	SAMEA1024089	GCA_001335815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/815/GCA_001335815.1_6593_4_21	-	2
Escherichia coli DEC12D	868194	PRJNA51027	51027	Proteobacteria	Gammaproteobacteria	5.40398	50.5	-	AIHD01	88	5954	5258	2/23/12	3/5/17	Contig	Institute for Genome Sciences	SAMN00222130	GCA_000250275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/275/GCA_000250275.2_ASM25027v2	22582382	DEC12D
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35788	65.6	-	COJL01	118	4283	4085	3/23/15	3/11/17	Contig	SC	SAMEA1016044	GCA_001376835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/835/GCA_001376835.1_6954_8_90	-	1487S
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA264274	264274	Proteobacteria	Gammaproteobacteria	4.75315	52.1	-	JRZJ01	45	4834	4614	9/22/15	2/28/17	Contig	The Chinese University of Hong Kong	SAMN03121893	GCA_001295725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/725/GCA_001295725.1_ASM129572v1	26370680	ST3363
Staphylococcus aureus H79477	1410883	PRJNA224514	224514	Terrabacteria group	Firmicutes	2.85367	32.7	-	JDNL01	71	3010	2836	2/5/14	3/3/17	Scaffold	Broad Institute	SAMN02383803	GCA_000565095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/565/095/GCA_000565095.1_Stap_aure_H79477_V1	-	H79477
Staphylococcus aureus W50101	1412811	PRJNA225229	225229	Terrabacteria group	Firmicutes	2.78984	32.8	-	JDZS01	37	2897	2742	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385551	GCA_000569135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/135/GCA_000569135.1_Stap_aure_W50101_V1	-	W50101
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA264276	264276	Proteobacteria	Gammaproteobacteria	4.95609	52.3	-	JRZH01	84	5084	4836	9/22/15	2/28/17	Contig	The Chinese University of Hong Kong	SAMN03121816	GCA_001295745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/745/GCA_001295745.1_ASM129574v1	26370680	ST2287
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39675	65.6	-	COGK01	100	4297	4112	3/23/15	3/11/17	Contig	SC	SAMEA1016051	GCA_001376875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/875/GCA_001376875.1_6954_1_69	-	0635R
Escherichia coli DEC12E	868195	PRJNA51029	51029	Proteobacteria	Gammaproteobacteria	5.29697	50.6	-	AIHE01	97	5735	5143	2/23/12	2/22/17	Contig	Institute for Genome Sciences	SAMN00210683	GCA_000250295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/295/GCA_000250295.2_ASM25029v2	22582382	DEC12E
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04869	39.7	-	CGWD01	56	2282	2064	4/21/15	3/11/17	Contig	SC	SAMEA1024090	GCA_001335835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/835/GCA_001335835.1_6631_6_20	-	32A
Klebsiella pneumoniae	573	PRJNA356165	356165	Proteobacteria	Gammaproteobacteria	5.64751	57	-	MSLH01	201	5772	5504	4/21/17	4/24/17	Scaffold	University of Minnesota	SAMN06107581	GCA_002103605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/605/GCA_002103605.1_ASM210360v1	-	MNCRE64
Pseudomonas aeruginosa	287	PRJNA240151	240151	Proteobacteria	Gammaproteobacteria	6.39154	66.5	-	JFJU01	18	6028	5888	6/20/14	3/16/17	Scaffold	Walter Reed Army Institute of Research	SAMN02673308	GCA_000710625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/625/GCA_000710625.1_MRSN18971scaf	-	MRSN18971
Acinetobacter baumannii	470	PRJEB19248	384892	Proteobacteria	Gammaproteobacteria	3.96985	39.1	-	FUES01	153	3779	3616	4/30/17	5/6/17	Contig	UNIMI	SAMEA70021918	GCA_900161965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/161/965/GCA_900161965.1_74SM01	-	-
Acinetobacter baumannii	470	PRJEB19248	384892	Proteobacteria	Gammaproteobacteria	4.00275	39	-	FUEV01	138	3824	3659	4/30/17	5/6/17	Contig	UNIMI	SAMEA70019668	GCA_900161975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/161/975/GCA_900161975.1_65SM01	-	-
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.25989	66.5	-	JTMX01	101	5924	5741	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105746	GCA_000789485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/485/GCA_000789485.1_AZPAE15049	25367914	AZPAE15049
Klebsiella pneumoniae	573	PRJNA356165	356165	Proteobacteria	Gammaproteobacteria	5.64848	57	-	MSLI01	223	5795	5486	4/21/17	4/24/17	Scaffold	University of Minnesota	SAMN06107582	GCA_002103635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/635/GCA_002103635.1_ASM210363v1	-	MNCRE66
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.19094	39.5	-	CHOI01	70	2394	2150	4/21/15	3/11/17	Contig	SC	SAMEA1024114	GCA_001335915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/915/GCA_001335915.1_6631_6_23	-	6A
Escherichia coli DEC13A	868196	PRJNA51031	51031	Proteobacteria	Gammaproteobacteria	4.6887	50.8	-	AIHF01	37	4912	4504	2/23/12	2/22/17	Contig	Institute for Genome Sciences	SAMN00199317	GCA_000250315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/315/GCA_000250315.2_ASM25031v2	22582382	DEC13A
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38517	65.6	-	COIE01	104	4305	4108	3/23/15	3/11/17	Contig	SC	SAMEA1016081	GCA_001377195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/195/GCA_001377195.1_6954_7_38	-	0842R
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB1252	205706	Proteobacteria	Gammaproteobacteria	4.93305	51.8	-	CGSA01	62	5139	4756	4/21/15	2/28/17	Contig	SC	SAMEA1903757	GCA_001317605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/605/GCA_001317605.1_9475_4_54	-	E2889
Staphylococcus aureus W50092	1412810	PRJNA225228	225228	Terrabacteria group	Firmicutes	2.93113	32.7	-	JDZT01	16	3087	2925	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385550	GCA_000569155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/155/GCA_000569155.1_Stap_aure_W50092_V1	-	W50092
Staphylococcus aureus W46883	1412809	PRJNA225227	225227	Terrabacteria group	Firmicutes	2.91377	32.7	-	JDZU01	9	3074	2913	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385549	GCA_000569175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/175/GCA_000569175.1_Stap_aure_W46883_V1	-	W46883
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB1252	205706	Proteobacteria	Gammaproteobacteria	4.92958	51.8	-	CEYM01	49	5111	4735	3/10/15	2/28/17	Contig	SC	SAMEA1903759	GCA_001317645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/645/GCA_001317645.1_9475_4_55	-	E2990
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3642	65.6	-	COGT01	111	4295	4085	3/22/15	3/11/17	Contig	SC	SAMEA1016083	GCA_001377215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/215/GCA_001377215.1_6954_1_77	-	0584L
Escherichia coli DEC13B	868197	PRJNA51033	51033	Proteobacteria	Gammaproteobacteria	4.70994	50.7	-	AIHG01	53	4929	4534	2/23/12	2/22/17	Contig	Institute for Genome Sciences	SAMN00199318	GCA_000250335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/335/GCA_000250335.2_ASM25033v2	22582382	DEC13B
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.18117	39.8	-	CHOE01	52	2386	2184	4/21/15	3/11/17	Contig	SC	SAMEA1024140	GCA_001335955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/955/GCA_001335955.1_6631_7_1	-	6B
Klebsiella pneumoniae	573	PRJNA356165	356165	Proteobacteria	Gammaproteobacteria	5.6845	57	-	MSLJ01	147	5781	5529	4/21/17	4/24/17	Scaffold	University of Minnesota	SAMN06107583	GCA_002103645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/645/GCA_002103645.1_ASM210364v1	-	MNCRE67
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.67305	66.1	-	JTNL01	95	6353	6123	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105732	GCA_000789495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/495/GCA_000789495.1_AZPAE15035	25367914	AZPAE15035
Acinetobacter baumannii	470	PRJEB19248	384892	Proteobacteria	Gammaproteobacteria	4.00242	39	-	FUER01	153	3823	3643	4/30/17	5/6/17	Contig	UNIMI	SAMEA70018168	GCA_900161985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/161/985/GCA_900161985.1_25C30	-	-
Acinetobacter baumannii	470	PRJEB19248	384892	Proteobacteria	Gammaproteobacteria	3.98327	39	-	FUEU01	117	3795	3624	4/30/17	5/6/17	Contig	UNIMI	SAMEA70015918	GCA_900161995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/161/995/GCA_900161995.1_2RED09	-	-
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.05693	66	-	JTSG01	126	6873	6635	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105607	GCA_000789525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/525/GCA_000789525.1_AZPAE14909	25367914	AZPAE14909
Klebsiella pneumoniae	573	PRJNA356165	356165	Proteobacteria	Gammaproteobacteria	5.69425	57	-	MSLK01	170	5810	5527	4/21/17	4/24/17	Scaffold	University of Minnesota	SAMN06107584	GCA_002103655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/655/GCA_002103655.1_ASM210365v1	-	MNCRE68
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.00054	39.6	-	CHOG01	68	2199	1984	4/21/15	3/11/17	Contig	SC	SAMEA1024160	GCA_001336055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/055/GCA_001336055.1_6631_7_5	-	35C
Escherichia coli DEC13C	868198	PRJNA51035	51035	Proteobacteria	Gammaproteobacteria	5.29497	50.7	-	AIHH01	68	5665	5069	2/23/12	2/22/17	Contig	Institute for Genome Sciences	SAMN00199319	GCA_000250355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/355/GCA_000250355.2_ASM25035v2	22582382	DEC13C
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3672	65.6	-	CHCC01	103	4287	4071	4/21/15	3/11/17	Contig	SC	SAMEA1016086	GCA_001377255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/255/GCA_001377255.1_6954_1_60	-	0345B
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.87873	52.1	-	CVMH01	74	5019	4773	4/10/15	2/28/17	Contig	SC	SAMEA773545	GCA_001326275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/275/GCA_001326275.1_5275_1_5	-	V16
Staphylococcus aureus W36570	1412805	PRJNA225223	225223	Terrabacteria group	Firmicutes	2.84997	32.7	-	JDZV01	11	2985	2825	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385545	GCA_000569195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/195/GCA_000569195.1_Stap_aure_W36570_V1	-	W36570
Staphylococcus aureus W36553	1412804	PRJNA225222	225222	Terrabacteria group	Firmicutes	2.89721	32.7	-	JDZW01	9	3062	2890	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385544	GCA_000569215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/215/GCA_000569215.1_Stap_aure_W36553_V1	-	W36553
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.72796	52	-	CGRA01	53	4899	4536	4/21/15	2/28/17	Contig	SC	SAMEA1406324	GCA_001328575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/575/GCA_001328575.1_7468_7_61	-	IB5348
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36406	65.6	-	COGW01	97	4268	4086	3/22/15	3/11/17	Contig	SC	SAMEA1016091	GCA_001377335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/335/GCA_001377335.1_6954_1_80	-	0221R
Escherichia coli DEC13D	868199	PRJNA51037	51037	Proteobacteria	Gammaproteobacteria	5.00983	50.8	-	AIHI01	42	5291	4833	2/23/12	2/22/17	Contig	Institute for Genome Sciences	SAMN00199321	GCA_000250375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/375/GCA_000250375.2_ASM25037v2	22582382	DEC13D
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15324	39.6	-	CGVS01	75	2410	2152	4/21/15	3/11/17	Contig	SC	SAMEA1024177	GCA_001336135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/135/GCA_001336135.1_6593_4_14	-	21
Klebsiella pneumoniae	573	PRJNA356165	356165	Proteobacteria	Gammaproteobacteria	5.67249	57	-	MSLL01	174	5777	5496	4/21/17	4/24/17	Scaffold	University of Minnesota	SAMN06107585	GCA_002103675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/675/GCA_002103675.1_ASM210367v1	-	MNCRE70
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.75074	66.1	-	JTRM01	91	6405	6215	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105627	GCA_000789535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/535/GCA_000789535.1_AZPAE14929	25367914	AZPAE14929
Acinetobacter baumannii	470	PRJEB19248	384892	Proteobacteria	Gammaproteobacteria	4.00189	39	-	FUET01	116	3821	3658	4/30/17	5/6/17	Contig	UNIMI	SAMEA70025668	GCA_900162005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/005/GCA_900162005.1_MONUR	-	-
Acinetobacter baumannii	470	PRJEB19248	384892	Proteobacteria	Gammaproteobacteria	4.00156	39	-	FUEW01	168	3824	3658	4/30/17	5/6/17	Contig	UNIMI	SAMEA70021168	GCA_900162015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/015/GCA_900162015.1_72SM01	-	-
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.31832	66.5	-	JTRX01	76	5996	5839	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105616	GCA_000789545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/545/GCA_000789545.1_AZPAE14918	25367914	AZPAE14918
Klebsiella pneumoniae	573	PRJNA356166	356166	Proteobacteria	Gammaproteobacteria	5.67167	56.9	-	MSLN01	136	5769	5508	4/21/17	4/24/17	Scaffold	University of Minnesota	SAMN06107587	GCA_002103715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/715/GCA_002103715.1_ASM210371v1	-	MNCRE74
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07058	39.8	-	CFHV01	51	2316	2075	3/15/15	3/11/17	Contig	SC	SAMEA1024183	GCA_001336155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/155/GCA_001336155.1_6593_4_11	-	35F
Escherichia coli DEC13E	868200	PRJNA51039	51039	Proteobacteria	Gammaproteobacteria	4.97969	50.6	-	AIHJ01	54	5220	4736	2/23/12	2/22/17	Contig	Institute for Genome Sciences	SAMN00199320	GCA_000250395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/395/GCA_000250395.2_ASM25039v2	22582382	DEC13E
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38552	65.6	-	COJB01	109	4293	4095	3/22/15	3/11/17	Contig	SC	SAMEA1016126	GCA_001377655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/655/GCA_001377655.1_6954_8_77	-	1456J
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.72234	52.1	-	CIBQ01	60	4889	4534	4/21/15	2/28/17	Contig	SC	SAMEA1406329	GCA_001328615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/615/GCA_001328615.1_7468_7_91	-	IB5381
Staphylococcus aureus W33592	1412803	PRJNA225221	225221	Terrabacteria group	Firmicutes	2.85994	32.7	-	JDZX01	33	2994	2863	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385543	GCA_000569235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/235/GCA_000569235.1_Stap_aure_W33592_V1	-	W33592
Staphylococcus aureus W33578	1412802	PRJNA225220	225220	Terrabacteria group	Firmicutes	2.9335	32.7	-	JDZY01	10	3090	2920	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385542	GCA_000569255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/255/GCA_000569255.1_Stap_aure_W33578_V1	-	W33578
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.72352	52	-	CHGB01	47	4886	4526	4/21/15	2/28/17	Contig	SC	SAMEA1406337	GCA_001328655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/655/GCA_001328655.1_7468_7_71	-	IB5358
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3623	65.6	-	COHY01	109	4289	4077	3/23/15	3/11/17	Contig	SC	SAMEA1016127	GCA_001377675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/675/GCA_001377675.1_6954_7_3	-	0440E
Escherichia coli DEC14A	868201	PRJNA51043	51043	Proteobacteria	Gammaproteobacteria	4.95118	50.6	-	AIHK01	46	5134	4610	2/23/12	2/22/17	Contig	Institute for Genome Sciences	SAMN00210635	GCA_000250415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/415/GCA_000250415.2_ASM25041v2	22582382	DEC14A
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07839	39.7	-	CHNK01	132	2307	2072	4/21/15	3/11/17	Contig	SC	SAMEA974698	GCA_001336835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/835/GCA_001336835.1_6259_6_19	-	13
Klebsiella pneumoniae	573	PRJNA356166	356166	Proteobacteria	Gammaproteobacteria	5.6547	57	-	MSLM01	137	5741	5502	4/21/17	4/24/17	Scaffold	University of Minnesota	SAMN06107586	GCA_002103725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/725/GCA_002103725.1_ASM210372v1	-	MNCRE73
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.04924	65.6	-	JTUU01	76	6808	6613	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105541	GCA_000789555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/555/GCA_000789555.1_AZPAE14840	25367914	AZPAE14840
Acinetobacter baumannii	470	PRJEB15065	350436	Proteobacteria	Gammaproteobacteria	4.11001	39.2	-	FWWO01	205	4032	3785	4/6/17	4/17/17	Contig	Faculty of medecine and pharmacy RABAT	SAMEA103954683	GCA_900175175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/175/175/GCA_900175175.1_AE27M	-	ABE27_M
Acinetobacter baumannii	470	PRJEB15065	350436	Proteobacteria	Gammaproteobacteria	3.97045	39.1	-	FWWP01	197	3914	3698	4/6/17	4/17/17	Contig	Faculty of medecine and pharmacy RABAT	SAMEA103955435	GCA_900175185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/175/185/GCA_900175185.1_AE21M	-	ABE21_M
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.8452	66	-	JTUT01	90	6543	6321	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105542	GCA_000789605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/605/GCA_000789605.1_AZPAE14841	25367914	AZPAE14841
Klebsiella pneumoniae	573	PRJNA356180	356180	Proteobacteria	Gammaproteobacteria	5.66756	56.9	-	MSLO01	155	5784	5512	4/21/17	4/24/17	Scaffold	University of Minnesota	SAMN06108980	GCA_002103735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/735/GCA_002103735.1_ASM210373v1	-	MNCRE75
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.09469	39.6	-	CHPG01	46	2279	2051	4/21/15	3/11/17	Contig	SC	SAMEA1024538	GCA_001336875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/875/GCA_001336875.1_6680_6_11	-	SMRU947
Escherichia coli DEC14B	868202	PRJNA51045	51045	Proteobacteria	Gammaproteobacteria	5.27328	50.5	-	AIHL01	84	5589	4922	2/23/12	8/4/17	Contig	Institute for Genome Sciences	SAMN00210616	GCA_000250435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/435/GCA_000250435.2_ASM25043v2	22582382	DEC14B
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39441	65.6	-	COHP01	88	4301	4107	3/23/15	3/11/17	Contig	SC	SAMEA1016142	GCA_001377755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/755/GCA_001377755.1_6954_7_22	-	0945D
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.72294	52	-	CHMJ01	47	4879	4517	4/21/15	2/28/17	Contig	SC	SAMEA1406338	GCA_001328675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/675/GCA_001328675.1_7468_7_89	-	IB5379
Staphylococcus aureus W33563	1412801	PRJNA225219	225219	Terrabacteria group	Firmicutes	2.78287	32.7	-	JDZZ01	47	2874	2727	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385541	GCA_000569275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/275/GCA_000569275.1_Stap_aure_W33563_V1	-	W33563
Staphylococcus aureus W29651	1412800	PRJNA225218	225218	Terrabacteria group	Firmicutes	2.85802	32.8	-	JEAA01	29	3019	2853	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385540	GCA_000569295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/295/GCA_000569295.1_Stap_aure_W29651_V1	-	W29651
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.59078	52.1	-	CGVB01	44	4725	4372	4/21/15	2/28/17	Contig	SC	SAMEA1406348	GCA_001328715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/715/GCA_001328715.1_7468_7_88	-	IB5378
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35535	65.6	-	COGH01	81	4256	4076	3/23/15	3/11/17	Contig	SC	SAMEA1016148	GCA_001377855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/855/GCA_001377855.1_6954_1_64	-	0459A
Escherichia coli DEC14C	868203	PRJNA51047	51047	Proteobacteria	Gammaproteobacteria	5.15244	50.8	-	AIHM01	76	5461	4859	2/23/12	5/18/17	Contig	Institute for Genome Sciences	SAMN00210648	GCA_000250455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/455/GCA_000250455.2_ASM25045v2	22582382	DEC14C
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.05557	39.7	-	CVKF01	60	2249	2021	4/2/15	3/11/17	Contig	SC	SAMEA1024557	GCA_001336995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/995/GCA_001336995.1_6805_1_7	-	SMRU1015
Klebsiella pneumoniae	573	PRJNA356180	356180	Proteobacteria	Gammaproteobacteria	5.63696	57	-	MSLP01	189	5761	5462	4/21/17	4/24/17	Scaffold	University of Minnesota	SAMN06108981	GCA_002103745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/103/745/GCA_002103745.1_ASM210374v1	-	MNCRE77
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.88941	65.9	-	JTUS01	80	6597	6401	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105543	GCA_000789625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/625/GCA_000789625.1_AZPAE14842	25367914	AZPAE14842
Acinetobacter baumannii	470	PRJEB15065	350436	Proteobacteria	Gammaproteobacteria	4.07432	39.2	-	FWYN01	236	4009	3764	4/13/17	4/22/17	Contig	Faculty of medecine and pharmacy RABAT	SAMEA103974762	GCA_900176685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/685/GCA_900176685.1_AC40M	-	AC40_M
Acinetobacter baumannii	470	PRJEB15065	350436	Proteobacteria	Gammaproteobacteria	4.02719	39	-	FWYM01	84	3970	3761	4/13/17	4/22/17	Contig	Faculty of medecine and pharmacy RABAT	SAMEA103975537	GCA_900176715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/715/GCA_900176715.1_AC15M	-	AC15_M
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.73748	66	-	JTUR01	125	6471	6229	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105544	GCA_000789635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/635/GCA_000789635.1_AZPAE14843	25367914	AZPAE14843
Klebsiella pneumoniae	573	PRJNA382724	382724	Proteobacteria	Gammaproteobacteria	5.60938	55.7	-	NCVW01	107	5645	5426	4/21/17	4/21/17	Scaffold	University of Sao Paulo	SAMN06717779	GCA_002104395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/395/GCA_002104395.1_ASM210439v1	-	JM2CRO
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.13798	39.5	-	CFBF01	64	2354	2148	3/15/15	3/11/17	Contig	SC	SAMEA1024610	GCA_001337375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/375/GCA_001337375.1_6755_1_8	-	SMRU776
Escherichia coli DEC14D	868204	PRJNA51049	51049	Proteobacteria	Gammaproteobacteria	5.1787	50.7	-	AIHN01	76	5516	4949	2/23/12	2/22/17	Contig	Institute for Genome Sciences	SAMN00210678	GCA_000250475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/475/GCA_000250475.2_ASM25047v2	22582382	DEC14D
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36417	65.6	-	COHG01	116	4294	4081	3/23/15	3/11/17	Contig	SC	SAMEA1016152	GCA_001377895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/895/GCA_001377895.1_6954_1_91	-	0044Z
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.7458	52.1	-	CGRH01	55	4920	4552	4/21/15	2/28/17	Contig	SC	SAMEA1406364	GCA_001328815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/815/GCA_001328815.1_7468_7_77	-	IB5366
Staphylococcus aureus W23225	1412797	PRJNA225215	225215	Terrabacteria group	Firmicutes	2.91245	32.8	-	JEAB01	8	3087	2925	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385537	GCA_000569315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/315/GCA_000569315.1_Stap_aure_W23225_V1	-	W23225
Staphylococcus aureus W23214	1412796	PRJNA225214	225214	Terrabacteria group	Firmicutes	2.79373	32.7	-	JEAC01	38	2923	2762	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385536	GCA_000569335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/335/GCA_000569335.1_Stap_aure_W23214_V1	-	W23214
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.7237	52	-	CGRG01	71	4883	4524	4/21/15	2/28/17	Contig	SC	SAMEA1406367	GCA_001328855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/855/GCA_001328855.1_7468_7_69	-	IB5356
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37936	65.6	-	COJE01	96	4290	4110	3/23/15	3/11/17	Contig	SC	SAMEA1016161	GCA_001377975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/975/GCA_001377975.1_6954_8_85	-	1472B
Escherichia coli DEC15A	868206	PRJNA51053	51053	Proteobacteria	Gammaproteobacteria	5.2461	50.6	-	AIHO01	60	5553	5034	2/23/12	2/22/17	Contig	Institute for Genome Sciences	SAMN00210681	GCA_000250495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/495/GCA_000250495.2_ASM25049v2	22582382	DEC15A
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07821	39.7	-	CFFX01	80	2318	2095	3/15/15	3/11/17	Contig	SC	SAMEA1024615	GCA_001337415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/415/GCA_001337415.1_6775_2_12	-	SMRU852
Klebsiella pneumoniae	573	PRJNA382722	382722	Proteobacteria	Gammaproteobacteria	5.62078	57	-	NCVX01	93	5614	5145	4/21/17	4/24/17	Scaffold	University of Sao Paulo	SAMN06717781	GCA_002104635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/635/GCA_002104635.1_ASM210463v1	-	BO2
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.41242	66.3	-	JTNK01	77	6087	5910	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105733	GCA_000789645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/645/GCA_000789645.1_AZPAE15036	25367914	AZPAE15036
Acinetobacter baumannii AB-HKU3-10	1346793	PRJNA208613	208613	Proteobacteria	Gammaproteobacteria	3.92494	39.1	-	ATHZ01	138	3774	3605	7/2/13	3/18/17	Scaffold	The University of Hong Kong	SAMN02471179	GCA_000417785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/785/GCA_000417785.2_ASM41778v2	-	AB-HKU3-10
Acinetobacter baumannii AB-HKU3-08	1346792	PRJNA208611	208611	Proteobacteria	Gammaproteobacteria	4.04319	39	-	ATHY01	106	3933	3761	7/2/13	3/18/17	Scaffold	The University of Hong Kong	SAMN02471176	GCA_000417805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/417/805/GCA_000417805.2_ASM41780v2	-	AB-HKU3-08
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.73277	66.2	-	JTUQ01	108	6434	6214	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105545	GCA_000789685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/685/GCA_000789685.1_AZPAE14844	25367914	AZPAE14844
Klebsiella pneumoniae	573	PRJNA359159	359159	Proteobacteria	Gammaproteobacteria	5.60783	56.9	-	MSMQ01	825	5968	5145	5/16/17	5/24/17	Scaffold	UR12SP37 Laboratoire de Microbiologie Sahloul	SAMN06187679	GCA_002140135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/135/GCA_002140135.1_ASM214013v1	-	WM-Tun-3771
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.05533	39.7	-	CFED01	56	2259	2047	3/15/15	3/11/17	Contig	SC	SAMEA1024635	GCA_001337515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/515/GCA_001337515.1_6755_1_7	-	SMRU775
Escherichia coli DEC15B	868207	PRJNA51055	51055	Proteobacteria	Gammaproteobacteria	5.26487	50.6	-	AIHP01	45	5590	5055	2/23/12	2/22/17	Contig	Institute for Genome Sciences	SAMN00210682	GCA_000250515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/515/GCA_000250515.2_ASM25051v2	22582382	DEC15B
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36215	65.6	-	COJK01	112	4287	4078	3/23/15	3/11/17	Contig	SC	SAMEA1016163	GCA_001377995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/995/GCA_001377995.1_6954_8_86	-	1473C
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.93146	52.1	-	CGDA01	37	5103	4844	3/15/15	2/28/17	Contig	SC	SAMEA1568490	GCA_001350055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/055/GCA_001350055.1_8490_2_67	-	CH24
Staphylococcus aureus W23207	1412795	PRJNA225213	225213	Terrabacteria group	Firmicutes	2.8982	32.7	-	JEAD01	11	3053	2887	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385535	GCA_000569355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/355/GCA_000569355.1_Stap_aure_W23207_V1	-	W23207
Staphylococcus aureus T67327	1412794	PRJNA225212	225212	Terrabacteria group	Firmicutes	2.88184	32.8	-	JEAE01	52	3012	2861	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385534	GCA_000569375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/375/GCA_000569375.1_Stap_aure_T67327_V1	-	T67327
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.93847	52.1	-	CFOA01	56	5111	4844	3/15/15	2/28/17	Contig	SC	SAMEA1568521	GCA_001350155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/155/GCA_001350155.1_8490_2_54	-	CH11
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36303	65.6	-	COHX01	109	4284	4078	3/23/15	3/11/17	Contig	SC	SAMEA1016165	GCA_001378015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/015/GCA_001378015.1_6954_7_33	-	0835J
Escherichia coli DEC15C	868208	PRJNA51057	51057	Proteobacteria	Gammaproteobacteria	5.20129	50.6	-	AIHQ01	32	5476	4999	2/23/12	2/22/17	Contig	Institute for Genome Sciences	SAMN00210684	GCA_000250535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/535/GCA_000250535.2_ASM25053v2	22582382	DEC15C
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.16673	39.4	-	CIHO01	77	2375	2153	4/21/15	3/11/17	Contig	SC	SAMEA1024637	GCA_001337535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/535/GCA_001337535.1_6805_1_2	-	SMRU1010
Klebsiella pneumoniae	573	PRJNA360210	360210	Proteobacteria	Gammaproteobacteria	5.58335	57.1	-	MSYN01	195	5518	5282	5/19/17	5/24/17	Scaffold	UR12SP37	SAMN06205215	GCA_002150645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/645/GCA_002150645.1_ASM215064v1	-	C2-D8-12
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.62101	66	-	JTUP01	198	6410	6092	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105546	GCA_000789705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/705/GCA_000789705.1_AZPAE14845	25367914	AZPAE14845
Acinetobacter baumannii	470	PRJNA255268	255268	Proteobacteria	Gammaproteobacteria	3.93684	38.9	-	JRTY01	65	3805	3674	12/17/14	3/16/17	Scaffold	The University of Queensland	SAMN03080630	GCA_000802885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/885/GCA_000802885.1_ASM80288v1	-	T173
Acinetobacter baumannii	470	PRJNA255268	255268	Proteobacteria	Gammaproteobacteria	3.93808	38.9	-	JRTX01	74	3823	3681	12/17/14	3/16/17	Scaffold	The University of Queensland	SAMN03080628	GCA_000802895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/895/GCA_000802895.1_ASM80289v1	-	T122
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.88148	66	-	JTRA01	134	6643	6306	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105639	GCA_000789725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/725/GCA_000789725.1_AZPAE14941	25367914	AZPAE14941
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.70184	57	-	NGSQ01	12	5571	5279	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521873	GCA_002152355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/355/GCA_002152355.1_ASM215235v1	-	BWH66
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.16381	39.7	-	CHUN01	103	2356	2092	4/21/15	3/11/17	Contig	SC	SAMEA1024639	GCA_001337555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/555/GCA_001337555.1_6755_4_2	-	SMRU1130
Escherichia coli DEC15D	868209	PRJNA51059	51059	Proteobacteria	Gammaproteobacteria	5.21033	50.6	-	AIHR01	31	5494	5017	2/23/12	2/22/17	Contig	Institute for Genome Sciences	SAMN00210679	GCA_000250555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/555/GCA_000250555.2_ASM25055v2	22582382	DEC15D
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38265	65.6	-	COHF01	95	4293	4099	3/23/15	3/11/17	Contig	SC	SAMEA1016186	GCA_001378215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/215/GCA_001378215.1_6954_1_90	-	0043Y
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.96873	52.1	-	CIJD01	59	5145	4865	4/21/15	2/28/17	Contig	SC	SAMEA1568534	GCA_001350235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/235/GCA_001350235.1_8490_2_81	-	CH38
Staphylococcus aureus T64318	1412792	PRJNA225210	225210	Terrabacteria group	Firmicutes	2.84752	32.8	-	JEAF01	15	3002	2836	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385532	GCA_000569395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/395/GCA_000569395.1_Stap_aure_T64318_V1	-	T64318
Staphylococcus aureus T60805	1412791	PRJNA225209	225209	Terrabacteria group	Firmicutes	2.84003	32.8	-	JEAG01	51	2967	2831	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385531	GCA_000569415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/415/GCA_000569415.1_Stap_aure_T60805_V1	-	T60805
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2770	204451	Proteobacteria	Gammaproteobacteria	4.75508	52	-	CGVC01	42	4922	4566	4/21/15	2/28/17	Contig	SC	SAMEA1687827	GCA_001350315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/315/GCA_001350315.1_8616_4_48	-	BCR175
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36153	65.6	-	COGG01	106	4274	4080	3/23/15	3/11/17	Contig	SC	SAMEA1016189	GCA_001378255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/255/GCA_001378255.1_6954_1_63	-	0404Q
Escherichia coli DEC15E	868210	PRJNA51061	51061	Proteobacteria	Gammaproteobacteria	5.22997	50.6	-	AIHS01	63	5528	4937	2/23/12	3/5/17	Contig	Institute for Genome Sciences	SAMN00217326	GCA_000250575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/250/575/GCA_000250575.2_ASM25057v2	22582382	DEC15E
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.0483	39.7	-	CHUB01	52	2225	2000	4/21/15	3/11/17	Contig	SC	SAMEA1024644	GCA_001337595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/595/GCA_001337595.1_6791_6_15	-	SMRU639
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.44634	57.3	-	NGSR01	4	5368	5131	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521874	GCA_002152365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/365/GCA_002152365.1_ASM215236v1	-	BWH67
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.81964	65.9	-	JTUO01	133	6580	6164	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105547	GCA_000789745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/745/GCA_000789745.1_AZPAE14846	25367914	AZPAE14846
Acinetobacter baumannii	470	PRJNA255268	255268	Proteobacteria	Gammaproteobacteria	3.79386	38.9	-	JRTZ01	34	3635	3478	12/17/14	3/16/17	Scaffold	The University of Queensland	SAMN03080633	GCA_000802915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/802/915/GCA_000802915.1_ASM80291v1	-	T214
Acinetobacter baumannii	470	PRJNA255268	255268	Proteobacteria	Gammaproteobacteria	3.89037	39	-	LAKO01	55	3745	3612	3/31/15	3/17/17	Scaffold	The University of Queensland	SAMN03418024	GCA_000966495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/495/GCA_000966495.1_ASM96649v1	-	J65
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.34556	66.4	-	JTUN01	82	6013	5845	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105548	GCA_000789755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/755/GCA_000789755.1_AZPAE14847	25367914	AZPAE14847
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.26406	57.5	-	NGST01	66	5231	4972	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04325161	GCA_002152395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/395/GCA_002152395.1_ASM215239v1	-	CHS242
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08136	39.7	-	CGXM01	69	2295	2083	4/21/15	3/11/17	Contig	SC	SAMEA1024649	GCA_001337655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/655/GCA_001337655.1_6775_2_14	-	SMRU854
Escherichia coli SCI-07	1144302	PRJNA82801	82801	Proteobacteria	Gammaproteobacteria	4.97233	50.6	-	AJFG01	68	5106	4789	3/14/12	5/18/17	Contig	UNICAMP	SAMN02471695	GCA_000252805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/805/GCA_000252805.2_ASM25280v2	22582380	SCI-07
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36201	65.6	-	COJI01	91	4269	4085	3/23/15	3/11/17	Contig	SC	SAMEA1016191	GCA_001378295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/295/GCA_001378295.1_6954_8_83	-	1470Z
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2770	204451	Proteobacteria	Gammaproteobacteria	4.72341	52	-	CGSK01	42	4884	4524	4/21/15	2/28/17	Contig	SC	SAMEA1687842	GCA_001350335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/335/GCA_001350335.1_8616_4_54	-	SP9
Staphylococcus aureus T57415	1412789	PRJNA225207	225207	Terrabacteria group	Firmicutes	2.87442	32.7	-	JEAH01	9	3025	2869	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385529	GCA_000569435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/435/GCA_000569435.1_Stap_aure_T57415_V1	-	T57415
Staphylococcus aureus T57397	1412787	PRJNA225205	225205	Terrabacteria group	Firmicutes	2.80986	32.8	-	JEAI01	37	2942	2783	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385527	GCA_000569455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/455/GCA_000569455.1_Stap_aure_T57397_V1	-	T57397
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2770	204451	Proteobacteria	Gammaproteobacteria	4.7278	52	-	CGVI01	45	4891	4533	4/21/15	2/28/17	Contig	SC	SAMEA1687853	GCA_001350375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/375/GCA_001350375.1_8616_4_53	-	SP2
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36377	65.6	-	COIK01	116	4291	4079	3/23/15	3/11/17	Contig	SC	SAMEA1016194	GCA_001378315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/315/GCA_001378315.1_6954_7_7	-	0460B
Escherichia coli W26	1090926	PRJNA88641	88641	Proteobacteria	Gammaproteobacteria	5.11853	50.6	-	AGIA01	165	5396	5032	4/6/12	5/18/17	Contig	Seoul National University	SAMN02470899	GCA_000258225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/225/GCA_000258225.1_ASM25822v1	22933771	W26
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11809	39.4	-	CVLC01	92	2302	2075	4/7/15	3/14/17	Contig	SC	SAMEA1024670	GCA_001337715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/715/GCA_001337715.1_6755_2_24	-	SMRU816
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	6.03151	56.6	-	NGSU01	9	5958	5608	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521884	GCA_002152405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/405/GCA_002152405.1_ASM215240v1	-	MGH133
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.72952	66.1	-	JTUL01	121	6457	6239	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105550	GCA_000789785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/785/GCA_000789785.1_AZPAE14850	25367914	AZPAE14850
Acinetobacter baumannii	470	PRJNA255268	255268	Proteobacteria	Gammaproteobacteria	3.88699	39	-	LAKQ01	83	3775	3633	3/31/15	3/17/17	Scaffold	The University of Queensland	SAMN03418025	GCA_000966525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/525/GCA_000966525.1_ASM96652v1	-	J133
Acinetobacter baumannii	470	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.98378	39	-	JWBD01	148	3845	3664	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197109	GCA_001052775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/775/GCA_001052775.1_ASM105277v1	26230489	1153_ABAU
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.25204	66.5	-	JTUM01	128	5979	5714	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105549	GCA_000789805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/805/GCA_000789805.1_AZPAE14848	25367914	AZPAE14848
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.90954	56.6	-	NGSV01	7	5820	5480	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521885	GCA_002152435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/435/GCA_002152435.1_ASM215243v1	-	MGH134
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.04849	39.6	-	CHPB01	53	2240	2004	4/21/15	3/5/17	Contig	SC	SAMEA1024688	GCA_001337815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/815/GCA_001337815.1_6680_5_3	-	SMRU915
Escherichia coli NCCP15657	1169863	PRJNA157429	157429	Proteobacteria	Gammaproteobacteria	5.01569	50.6	-	AJLU01	93	5325	4958	4/13/12	5/18/17	Contig	Korea Research Institute of Bioscience and Biotechnology	SAMN02470174	GCA_000258785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/785/GCA_000258785.1_EscCol1.0	22740674	NCCP15657
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35166	65.6	-	COJH01	103	4274	4068	3/23/15	3/11/17	Contig	SC	SAMEA1016202	GCA_001378415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/415/GCA_001378415.1_6954_8_81	-	1467W
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2770	204451	Proteobacteria	Gammaproteobacteria	4.75493	52	-	CGSG01	41	4917	4559	4/21/15	2/28/17	Contig	SC	SAMEA1687856	GCA_001350395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/395/GCA_001350395.1_8616_4_41	-	BCR62
Staphylococcus aureus T54294	1412786	PRJNA225204	225204	Terrabacteria group	Firmicutes	2.89162	32.7	-	JEAJ01	12	3040	2875	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385526	GCA_000569475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/475/GCA_000569475.1_Stap_aure_T54294_V1	-	T54294
Staphylococcus aureus T54280	1412784	PRJNA225202	225202	Terrabacteria group	Firmicutes	2.89585	32.7	-	JEAK01	9	3055	2893	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385524	GCA_000569495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/495/GCA_000569495.1_Stap_aure_T54280_V1	-	T54280
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2770	204451	Proteobacteria	Gammaproteobacteria	4.7326	52.1	-	CGSM01	43	4896	4543	4/21/15	2/28/17	Contig	SC	SAMEA1687869	GCA_001350415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/415/GCA_001350415.1_8616_4_57	-	SP66
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36613	65.6	-	COZN01	119	4300	4079	3/23/15	3/11/17	Contig	SC	SAMEA1403593	GCA_001379175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/175/GCA_001379175.1_7841_7_92	-	2073E
Escherichia coli J53	1144303	PRJNA82837	82837	Proteobacteria	Gammaproteobacteria	4.65082	50.8	-	AICK01	42	4809	4502	4/16/12	5/18/17	Contig	Seoul National University	SAMN02470906	GCA_000258865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/865/GCA_000258865.1_ASM25886v1	22740669	J53
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.16251	39.7	-	CHTX01	98	2325	2011	4/21/15	3/6/17	Contig	SC	SAMEA1024695	GCA_001337855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/855/GCA_001337855.1_6775_2_16	-	SMRU856
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.69419	57.1	-	NGSX01	5	5620	5352	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521896	GCA_002152445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/445/GCA_002152445.1_ASM215244v1	-	MGH147
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.28449	66.4	-	JTRW01	154	5973	5752	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105617	GCA_000789815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/815/GCA_000789815.1_AZPAE14919	25367914	AZPAE14919
Acinetobacter baumannii	470	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	3.99893	38.7	-	JVPN01	120	3842	3652	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197411	GCA_001055965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/965/GCA_001055965.1_ASM105596v1	26230489	219_ABAU
Acinetobacter baumannii	470	PRJEB8567	281539	Proteobacteria	Gammaproteobacteria	3.94559	39.3	-	CVLE01	165	3819	3628	4/18/15	3/18/17	Scaffold	CARDIFF UNIVERSITY	SAMEA3296319	GCA_001373535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/535/GCA_001373535.1_Acinetobacter_baumannii_CHI-45-1	-	-
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.61715	66.3	-	JTUK01	135	6372	6119	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105551	GCA_000789835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/835/GCA_000789835.1_AZPAE14851	25367914	AZPAE14851
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.63281	57.2	-	NGSY01	8	5578	5296	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521897	GCA_002152475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/475/GCA_002152475.1_ASM215247v1	-	MGH148
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14154	39.7	-	CHPU01	121	2301	2069	4/21/15	3/5/17	Contig	SC	SAMEA1024724	GCA_001337975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/975/GCA_001337975.1_6714_7_12	-	SMRU756
Escherichia coli AI27	1089445	PRJNA89369	89369	Proteobacteria	Gammaproteobacteria	4.90117	50.7	-	AJPQ01	262	5202	4828	4/17/12	5/18/17	Contig	Seoul National University	SAMN02470913	GCA_000259135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/135/GCA_000259135.1_ECAI27.hybrid.1	23144394	AI27
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39235	65.6	-	COVS01	106	4315	4113	3/23/15	3/11/17	Contig	SC	SAMEA1403595	GCA_001379215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/215/GCA_001379215.1_7769_8_49	-	1504L
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2770	204451	Proteobacteria	Gammaproteobacteria	4.80224	52.1	-	CGVD01	42	4983	4623	4/21/15	2/28/17	Contig	SC	SAMEA1687874	GCA_001350455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/455/GCA_001350455.1_8616_4_52	-	BCR232
Staphylococcus aureus T51022	1412783	PRJNA225201	225201	Terrabacteria group	Firmicutes	2.80072	32.8	-	JEAL01	6	2918	2771	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385523	GCA_000569515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/515/GCA_000569515.1_Stap_aure_T51022_V1	-	T51022
Staphylococcus aureus T51001	1412782	PRJNA225200	225200	Terrabacteria group	Firmicutes	2.84986	32.8	-	JEAM01	16	2999	2835	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385522	GCA_000569535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/535/GCA_000569535.1_Stap_aure_T51001_V1	-	T51001
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3164	204701	Proteobacteria	Gammaproteobacteria	4.93476	51.8	-	CGVG01	48	5134	4748	4/21/15	2/28/17	Contig	SC	SAMEA1571992	GCA_001355455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/455/GCA_001355455.1_8525_3_61	-	Ke482
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3688	65.6	-	CONS01	119	4287	4078	3/22/15	3/11/17	Contig	SC	SAMEA1403617	GCA_001379555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/555/GCA_001379555.1_7156_7_88	-	1659E
Escherichia coli NCCP15647	1169663	PRJNA157365	157365	Proteobacteria	Gammaproteobacteria	5.1463	50.6	-	AJMB01	126	5466	5084	4/23/12	5/18/17	Contig	KRIBB	SAMN02470175	GCA_000259385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/385/GCA_000259385.1_NCCP15647_1.0	22740672	NCCP15647
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.03362	39.7	-	CHTY01	66	2232	2026	4/21/15	3/5/17	Contig	SC	SAMEA1024735	GCA_001338015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/015/GCA_001338015.1_6775_1_23	-	SMRU839
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.67273	57.1	-	NGTA01	10	5324	5023	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521902	GCA_002152485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/485/GCA_002152485.1_ASM215248v1	-	MGH153
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.8606	66	-	JTUJ01	233	6679	6381	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105552	GCA_000789845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/845/GCA_000789845.1_AZPAE14852	25367914	AZPAE14852
Acinetobacter baumannii	470	PRJEB8567	281539	Proteobacteria	Gammaproteobacteria	4.03901	39.1	-	CVLD01	140	3900	3744	4/18/15	3/18/17	Scaffold	CARDIFF UNIVERSITY	SAMEA3298507	GCA_001373575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/575/GCA_001373575.1_A._baumannii_CHI-34	-	-
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	4.07907	39	-	FBWS01	70	3953	3803	1/10/16	3/19/17	Scaffold	SC	SAMEA1709843	GCA_001511855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/855/GCA_001511855.1_9179_4_85	-	J10
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.88057	65.9	-	JTSA01	122	6643	6387	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105613	GCA_000789885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/885/GCA_000789885.1_AZPAE14915	25367914	AZPAE14915
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	6.02485	56.6	-	NGTB01	11	5943	5590	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521904	GCA_002152515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/515/GCA_002152515.1_ASM215251v1	-	MGH155
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.129	39.5	-	CHOZ01	46	2352	2139	4/21/15	3/5/17	Contig	SC	SAMEA1024745	GCA_001338055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/055/GCA_001338055.1_6680_6_22	-	SMRU958
Escherichia coli O32:H37 str. P4	1167694	PRJNA91125	91125	Proteobacteria	Gammaproteobacteria	4.87247	50.6	-	AJQW01	72	5050	4693	4/23/12	5/18/17	Contig	Kimron Veterinary Institute	SAMN02470124	GCA_000259425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/425/GCA_000259425.1_ASM25942v1	22740662	P4
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36885	65.6	-	COXO01	106	4291	4083	3/22/15	3/11/17	Contig	SC	SAMEA1403656	GCA_001380135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/135/GCA_001380135.1_7841_6_19	-	1821F
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72536	52	-	CHMG01	43	4889	4536	4/21/15	2/28/17	Contig	SC	SAMEA1572806	GCA_001355895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/895/GCA_001355895.1_8447_8_13	-	MDUST85
Staphylococcus aureus T44834	1412781	PRJNA225199	225199	Terrabacteria group	Firmicutes	2.85226	32.8	-	JEAN01	14	3004	2837	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385521	GCA_000569555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/555/GCA_000569555.1_Stap_aure_T44834_V1	-	T44834
Staphylococcus aureus T44830	1412780	PRJNA225198	225198	Terrabacteria group	Firmicutes	2.88695	32.8	-	JEAO01	42	3018	2868	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385520	GCA_000569575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/575/GCA_000569575.1_Stap_aure_T44830_V1	-	T44830
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7279	52	-	CHGD01	43	4894	4526	4/21/15	2/28/17	Contig	SC	SAMEA1572812	GCA_001355935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/935/GCA_001355935.1_8490_6_55	-	MDUST55
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3526	65.6	-	COVH01	109	4288	4068	3/22/15	3/11/17	Contig	SC	SAMEA1403658	GCA_001380155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/155/GCA_001380155.1_7769_7_40	-	1432H
Escherichia coli NCCP15658	1169862	PRJNA157427	157427	Proteobacteria	Gammaproteobacteria	5.46231	50.4	-	AJMD01	51	5842	5384	4/30/12	5/18/17	Contig	Korea Research Institute of Bioscience and Biotechnology	SAMN02470181	GCA_000260475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/475/GCA_000260475.1_NCCP15658v1.0	22740673	NCCP15658
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11059	39.5	-	CHPP01	176	2293	2094	4/21/15	3/5/17	Contig	SC	SAMEA1024753	GCA_001338155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/155/GCA_001338155.1_6714_7_11	-	SMRU755
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.91621	56.6	-	NGTD01	14	5834	5541	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521906	GCA_002152525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/525/GCA_002152525.1_ASM215252v1	-	MGH157
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.82917	66.1	-	JTUI01	122	6628	6393	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105553	GCA_000789905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/905/GCA_000789905.1_AZPAE14853	25367914	AZPAE14853
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.964	39.1	-	FBWQ01	59	3856	3721	1/10/16	3/19/17	Scaffold	SC	SAMEA1709744	GCA_001511875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/875/GCA_001511875.1_9179_4_76	-	J1
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.96801	39.1	-	FBWP01	58	3855	3709	1/10/16	3/19/17	Scaffold	SC	SAMEA1709886	GCA_001511895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/895/GCA_001511895.1_9179_4_80	-	J5
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.34201	66.2	-	JTUH01	172	6041	5775	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105554	GCA_000789925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/925/GCA_000789925.1_AZPAE14855	25367914	AZPAE14855
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.95539	56.8	-	NGTE01	21	5724	5250	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521907	GCA_002152555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/555/GCA_002152555.1_ASM215255v1	-	MGH158
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.21684	39.5	-	CGWI01	67	2497	2250	4/21/15	3/5/17	Contig	SC	SAMEA1024755	GCA_001338175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/175/GCA_001338175.1_6680_4_13	-	23F
Escherichia coli O103:H25 str. CVM9340	1165940	PRJNA129419	129419	Proteobacteria	Gammaproteobacteria	5.26067	50.4	-	AJVQ01	301	5702	5216	5/23/12	5/18/17	Contig	FDA	SAMN00991746	GCA_000263895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/895/GCA_000263895.1_ASM26389v1	23052305	CVM9340
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37003	65.6	-	COUH01	117	4308	4092	3/22/15	3/11/17	Contig	SC	SAMEA1403667	GCA_001380275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/275/GCA_001380275.1_7769_7_1	-	1102Z
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72596	52	-	CIHC01	44	4887	4529	4/21/15	2/28/17	Contig	SC	SAMEA1572814	GCA_001355955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/955/GCA_001355955.1_8490_5_26	-	MDUST26
Staphylococcus aureus T44811	1412779	PRJNA225197	225197	Terrabacteria group	Firmicutes	2.93701	32.7	-	JEAP01	11	3098	2935	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385519	GCA_000569595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/595/GCA_000569595.1_Stap_aure_T44811_V1	-	T44811
Staphylococcus aureus T44461	1412778	PRJNA225196	225196	Terrabacteria group	Firmicutes	2.78057	32.8	-	JEAQ01	42	2912	2745	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385518	GCA_000569615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/615/GCA_000569615.1_Stap_aure_T44461_V1	-	T44461
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72187	52	-	CEXV01	40	4883	4533	3/12/15	2/28/17	Contig	SC	SAMEA1572824	GCA_001356115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/115/GCA_001356115.1_8447_8_5	-	MDUST77
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36661	65.6	-	COWK01	115	4300	4082	3/22/15	3/11/17	Contig	SC	SAMEA1403669	GCA_001380315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/315/GCA_001380315.1_7769_8_67	-	1690N
Escherichia coli O103:H2 str. CVM9450	1165941	PRJNA129421	129421	Proteobacteria	Gammaproteobacteria	5.38883	50.6	-	AJVR01	322	5840	5385	5/23/12	5/18/17	Contig	FDA	SAMN00991747	GCA_000263915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/915/GCA_000263915.1_ASM26391v1	23052305	CVM9450
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10193	39.5	-	CHPM01	61	2318	2106	4/21/15	3/5/17	Contig	SC	SAMEA1024774	GCA_001338275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/275/GCA_001338275.1_6680_6_20	-	SMRU956
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.67722	57.1	-	NGTG01	8	5573	5284	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521911	GCA_002152565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/565/GCA_002152565.1_ASM215256v1	-	MGH162
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.20044	65.8	-	JTNJ01	102	7005	6772	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105734	GCA_000789935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/935/GCA_000789935.1_AZPAE15037	25367914	AZPAE15037
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	4.01032	39	-	FBXH01	105	3884	3750	1/10/16	3/19/17	Scaffold	SC	SAMEA1317937	GCA_001511915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/915/GCA_001511915.1_7521_8_47	-	D78
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.88057	39	-	FBXG01	65	3736	3617	1/10/16	3/19/17	Scaffold	SC	SAMEA1466056	GCA_001511935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/935/GCA_001511935.1_7468_2_60	-	D30
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.33557	66.5	-	JTUG01	107	6020	5819	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105555	GCA_000789965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/965/GCA_000789965.1_AZPAE14856	25367914	AZPAE14856
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.77023	57.1	-	NGTH01	11	5824	5535	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521914	GCA_002152595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/595/GCA_002152595.1_ASM215259v1	-	MGH165
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.05122	39.7	-	CFFI01	54	2254	2034	3/15/15	3/11/17	Contig	SC	SAMEA1024784	GCA_001338355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/355/GCA_001338355.1_6680_5_7	-	SMRU919
Escherichia coli O111:H11 str. CVM9534	1165946	PRJNA129415	129415	Proteobacteria	Gammaproteobacteria	5.45949	50.3	-	AJVS01	559	6084	5489	5/23/12	5/18/17	Contig	FDA	SAMN00991745	GCA_000263935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/935/GCA_000263935.1_ASM26393v1	23052305	CVM9534
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36665	65.6	-	COUQ01	118	4305	4078	3/23/15	3/11/17	Contig	SC	SAMEA1403672	GCA_001380355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/355/GCA_001380355.1_7769_7_2	-	1162P
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72795	52.1	-	CGUZ01	41	4912	4531	4/21/15	2/28/17	Contig	SC	SAMEA1572829	GCA_001356155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/155/GCA_001356155.1_8490_6_45	-	MDUST45
Staphylococcus aureus T44444	1412777	PRJNA225195	225195	Terrabacteria group	Firmicutes	2.77206	32.7	-	JEAR01	40	2879	2700	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385517	GCA_000569635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/635/GCA_000569635.1_Stap_aure_T44444_V1	-	T44444
Staphylococcus aureus T40867	1412775	PRJNA225193	225193	Terrabacteria group	Firmicutes	2.82804	32.9	-	JEAS01	28	2929	2790	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385515	GCA_000569655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/655/GCA_000569655.1_Stap_aure_T40867_V1	-	T40867
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72518	52	-	CGRO01	46	4879	4525	4/21/15	2/28/17	Contig	SC	SAMEA1572845	GCA_001356255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/255/GCA_001356255.1_8447_8_17	-	MDUST89
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36806	65.6	-	CONY01	99	4284	4088	3/23/15	3/11/17	Contig	SC	SAMEA1403682	GCA_001380515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/515/GCA_001380515.1_7314_8_67	-	0042X
Escherichia coli O111:H11 str. CVM9545	1163391	PRJNA89667	89667	Proteobacteria	Gammaproteobacteria	5.6148	50.3	-	AJVT01	790	6446	5703	5/23/12	5/18/17	Contig	US Food and Drug Administration	SAMN00991742	GCA_000263955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/955/GCA_000263955.1_ASM26395v1	23052305	CVM9545
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11216	39.7	-	CHPH01	55	2264	1983	4/21/15	3/11/17	Contig	SC	SAMEA1024810	GCA_001338495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/495/GCA_001338495.1_6680_6_7	-	SMRU943
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.55633	57.1	-	NGTI01	8	5433	5153	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521915	GCA_002152605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/605/GCA_002152605.1_ASM215260v1	-	MGH166
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.25365	66.5	-	JTSF01	62	5919	5750	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105608	GCA_000789975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/975/GCA_000789975.1_AZPAE14910	25367914	AZPAE14910
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.90006	39	-	FBWV01	57	3775	3651	1/10/16	3/19/17	Scaffold	SC	SAMEA1466011	GCA_001511975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/975/GCA_001511975.1_7468_2_93	-	A92
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	4.01111	39	-	FBXC01	106	3890	3750	1/10/16	3/19/17	Scaffold	SC	SAMEA1317920	GCA_001511995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/995/GCA_001511995.1_7521_8_27	-	D81
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.86931	66.1	-	JTUF01	167	6740	6433	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105556	GCA_000789995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/789/995/GCA_000789995.1_AZPAE14857	25367914	AZPAE14857
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.66375	57.1	-	NGTJ01	4	5571	5314	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521916	GCA_002152635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/635/GCA_002152635.1_ASM215263v1	-	MGH167
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14492	39.6	-	CHUC01	62	2375	2107	4/21/15	3/11/17	Contig	SC	SAMEA1024813	GCA_001338515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/515/GCA_001338515.1_6791_6_5	-	SMRU629
Escherichia coli O111:H8 str. CVM9570	1165945	PRJNA129413	129413	Proteobacteria	Gammaproteobacteria	5.5142	50.3	-	AJVU01	633	6173	5505	5/23/12	5/18/17	Contig	FDA	SAMN00991744	GCA_000263975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/975/GCA_000263975.1_ASM26397v1	23052305	CVM9570
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36803	65.6	-	COOM01	108	4291	4082	3/22/15	3/11/17	Contig	SC	SAMEA1403698	GCA_001380795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/795/GCA_001380795.1_7314_8_82	-	1523G
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74576	52.1	-	CEWS01	46	4921	4550	3/11/15	2/28/17	Contig	SC	SAMEA1903831	GCA_001356355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/355/GCA_001356355.1_9475_6_3	-	1019695
Staphylococcus aureus M91160	1412774	PRJNA225192	225192	Terrabacteria group	Firmicutes	2.80982	32.8	-	JEAT01	29	2910	2773	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385514	GCA_000569675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/675/GCA_000569675.1_Stap_aure_M91160_V1	-	M91160
Staphylococcus aureus M91155	1412773	PRJNA225191	225191	Terrabacteria group	Firmicutes	2.82193	32.8	-	JEAU01	36	2921	2776	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385513	GCA_000569695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/695/GCA_000569695.1_Stap_aure_M91155_V1	-	M91155
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74873	52.1	-	CEXC01	48	4917	4552	3/10/15	2/28/17	Contig	SC	SAMEA1903836	GCA_001356375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/375/GCA_001356375.1_9475_6_8	-	1030208
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3645	65.6	-	COXR01	102	4282	4073	3/23/15	3/11/17	Contig	SC	SAMEA1403711	GCA_001381015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/015/GCA_001381015.1_7841_6_25	-	type strain: 1833
Escherichia coli O111:H8 str. CVM9574	1165943	PRJNA129397	129397	Proteobacteria	Gammaproteobacteria	5.3608	50.5	-	AJVV01	469	5913	5323	5/23/12	5/18/17	Contig	FDA	SAMN00991743	GCA_000263995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/995/GCA_000263995.1_ASM26399v1	23052305	CVM9574
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.18076	39.5	-	CHTR01	80	2451	2200	4/21/15	3/11/17	Contig	SC	SAMEA1024825	GCA_001338595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/595/GCA_001338595.1_6791_6_19	-	SMRU643
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.70662	57.2	-	NGTM01	6	5652	5393	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521921	GCA_002152655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/655/GCA_002152655.1_ASM215265v1	-	MGH172
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.66055	66	-	JTUE01	169	6484	6199	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105557	GCA_000790025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/025/GCA_000790025.1_AZPAE14858	25367914	AZPAE14858
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	4.06916	39	-	FBXB01	81	3941	3809	1/10/16	3/19/17	Scaffold	SC	SAMEA1317939	GCA_001512015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/015/GCA_001512015.1_7521_8_25	-	WM98
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.95678	39	-	FBWY01	96	3844	3708	1/10/16	3/19/17	Scaffold	SC	SAMEA1317924	GCA_001512035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/035/GCA_001512035.1_7521_8_32	-	D2
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.52786	66.3	-	JTUD01	122	6255	6031	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105558	GCA_000790035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/035/GCA_000790035.1_AZPAE14859	25367914	AZPAE14859
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.69506	57	-	NGTO01	3	5583	5327	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521934	GCA_002152675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/675/GCA_002152675.1_ASM215267v1	-	MGH185
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.04658	39.7	-	CGXF01	57	2246	2040	4/21/15	3/11/17	Contig	SC	SAMEA1024835	GCA_001338615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/615/GCA_001338615.1_6755_3_23	-	SMRU887
Escherichia coli O26:H11 str. CVM9942	1165949	PRJNA129423	129423	Proteobacteria	Gammaproteobacteria	5.61928	50.4	-	AJVW01	568	6311	5687	5/23/12	5/18/17	Contig	FDA	SAMN00991748	GCA_000264015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/015/GCA_000264015.1_ASM26401v1	23052305	CVM9942
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36283	65.6	-	CORA01	125	4293	4089	3/23/15	3/11/17	Contig	SC	SAMEA1403713	GCA_001381035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/035/GCA_001381035.1_7755_3_85	-	0534G
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70207	52.1	-	CEYN01	43	4866	4514	3/11/15	2/28/17	Contig	SC	SAMEA1903841	GCA_001356395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/395/GCA_001356395.1_9475_6_14	-	1025691
Staphylococcus aureus M91141	1412772	PRJNA225190	225190	Terrabacteria group	Firmicutes	2.91903	32.8	-	JEAV01	13	3090	2934	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385512	GCA_000569715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/715/GCA_000569715.1_Stap_aure_M91141_V1	-	M91141
Staphylococcus aureus M87665	1412771	PRJNA225189	225189	Terrabacteria group	Firmicutes	2.85195	32.8	-	JEAW01	46	2985	2816	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385511	GCA_000569735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/735/GCA_000569735.1_Stap_aure_M87665_V1	-	M87665
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73613	52	-	CGSB01	44	4901	4539	4/21/15	2/28/17	Contig	SC	SAMEA1903844	GCA_001356415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/415/GCA_001356415.1_9475_6_20	-	1018216
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.365	65.6	-	COWS01	113	4281	4076	3/22/15	3/11/17	Contig	SC	SAMEA1403717	GCA_001381115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/115/GCA_001381115.1_7769_8_79	-	1731H
Escherichia coli O26:H11 str. CVM10026	1165951	PRJNA129427	129427	Proteobacteria	Gammaproteobacteria	5.5728	50.4	-	AJVX01	485	6184	5586	5/23/12	5/18/17	Contig	FDA	SAMN00991749	GCA_000264035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/035/GCA_000264035.1_ASM26403v1	23052305	CVM10026
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.21749	39.6	-	CHPE01	42	2431	2209	4/21/15	3/11/17	Contig	SC	SAMEA1024843	GCA_001338695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/695/GCA_001338695.1_6680_4_9	-	23F
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.66407	57.1	-	NGTP01	9	5714	5410	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521935	GCA_002152685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/685/GCA_002152685.1_ASM215268v1	-	MGH186
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.76873	66.2	-	JTUC01	93	6554	6325	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105559	GCA_000790065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/065/GCA_000790065.1_AZPAE14860	25367914	AZPAE14860
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.92599	39.1	-	FBXE01	138	3790	3645	1/10/16	3/19/17	Scaffold	SC	SAMEA1466008	GCA_001512055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/055/GCA_001512055.1_7468_2_74	-	A388
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	4.0114	39.1	-	FBXD01	132	3890	3758	1/10/16	3/19/17	Scaffold	SC	SAMEA1317927	GCA_001512075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/075/GCA_001512075.1_7521_8_28	-	RBH3
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.71301	66.2	-	JTUB01	110	6485	6255	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105560	GCA_000790085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/085/GCA_000790085.1_AZPAE14861	25367914	AZPAE14861
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.6236	56.9	-	NGTR01	9	5503	5261	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521856	GCA_002152695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/695/GCA_002152695.1_ASM215269v1	-	UCI106
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07334	39.7	-	CHHJ01	75	2301	2086	4/21/15	3/11/17	Contig	SC	SAMEA1024850	GCA_001338735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/735/GCA_001338735.1_6791_6_18	-	SMRU642
Escherichia coli KD1	752783	PRJNA47095	47095	Proteobacteria	Gammaproteobacteria	4.84283	50.6	-	AJWO01	157	5003	4694	5/23/12	5/18/17	Contig	Cornell University	SAMN02429040	GCA_000264095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/095/GCA_000264095.1_ASM26409v1	-	KD1
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3669	65.6	-	CORQ01	113	4285	4071	3/23/15	3/11/17	Contig	SC	SAMEA1403730	GCA_001381315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/315/GCA_001381315.1_7755_4_17	-	0704R
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7454	52.1	-	CGSO01	51	4908	4548	4/21/15	2/28/17	Contig	SC	SAMEA1903850	GCA_001356475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/475/GCA_001356475.1_9475_6_24	-	1031785
Staphylococcus aureus M87641	1412770	PRJNA225188	225188	Terrabacteria group	Firmicutes	2.8235	32.8	-	JEAX01	28	2955	2794	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385510	GCA_000569755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/755/GCA_000569755.1_Stap_aure_M87641_V1	-	M87641
Staphylococcus aureus M80979	1412768	PRJNA225186	225186	Terrabacteria group	Firmicutes	2.91009	32.8	-	JEAY01	51	3059	2907	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385508	GCA_000569775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/775/GCA_000569775.1_Stap_aure_M80979_V1	-	M80979
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74678	52.1	-	CEZW01	50	4929	4555	3/10/15	2/28/17	Contig	SC	SAMEA1903860	GCA_001356515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/515/GCA_001356515.1_9475_6_33	-	1014451
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38918	65.6	-	COOA01	90	4299	4110	3/22/15	3/11/17	Contig	SC	SAMEA1403731	GCA_001381335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/335/GCA_001381335.1_7314_8_69	-	0353K
Escherichia coli 541-15	752785	PRJNA47099	47099	Proteobacteria	Gammaproteobacteria	5.03347	50.8	-	AJWQ01	301	5316	4893	5/23/12	5/18/17	Contig	Cornell University	SAMN02428992	GCA_000264115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/115/GCA_000264115.1_ASM26411v1	-	541-15
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11658	39.5	-	CFDB01	44	2344	2110	3/15/15	3/14/17	Contig	SC	SAMEA1024890	GCA_001338895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/895/GCA_001338895.1_6791_6_21	-	SMRU645
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.87271	56.9	-	NGTT01	18	5878	5537	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521859	GCA_002152735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/735/GCA_002152735.1_ASM215273v1	-	UCI109
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.06757	65.7	-	JTUA01	167	6796	6513	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105561	GCA_000790105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/105/GCA_000790105.1_AZPAE14862	25367914	AZPAE14862
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.79876	39	-	FBWW01	92	3677	3540	1/10/16	3/19/17	Scaffold	SC	SAMEA1317931	GCA_001512095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/095/GCA_001512095.1_7521_8_38	-	D62
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	4.06953	39	-	FBWT01	65	3947	3805	1/10/16	3/19/17	Scaffold	SC	SAMEA1709848	GCA_001512115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/115/GCA_001512115.1_9179_4_82	-	J7
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.26144	66.5	-	JTNI01	81	5976	5801	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105735	GCA_000790115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/115/GCA_000790115.1_AZPAE15038	25367914	AZPAE15038
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.61162	57.1	-	NGTX01	12	5534	5289	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521863	GCA_002152755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/755/GCA_002152755.1_ASM215275v1	-	UCI113
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07289	39.7	-	CFCT01	69	2290	2083	3/15/15	3/11/17	Contig	SC	SAMEA1024915	GCA_001339075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/075/GCA_001339075.1_6680_7_17	-	SMRU977
Escherichia coli 576-1	752787	PRJNA47103	47103	Proteobacteria	Gammaproteobacteria	5.19108	50.6	-	AJWS01	507	5555	5100	5/23/12	5/18/17	Contig	Cornell University	SAMN02429042	GCA_000264135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/135/GCA_000264135.1_ASM26413v1	-	576-1
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36832	65.6	-	COOP01	107	4288	4084	3/23/15	3/11/17	Contig	SC	SAMEA1403738	GCA_001381415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/415/GCA_001381415.1_7314_8_88	-	1346P
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73538	52	-	CEXW01	44	4902	4543	3/11/15	2/28/17	Contig	SC	SAMEA1903861	GCA_001356535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/535/GCA_001356535.1_9475_6_37	-	1022075
Staphylococcus aureus M77238	1412767	PRJNA225185	225185	Terrabacteria group	Firmicutes	2.82076	32.8	-	JEAZ01	56	2966	2791	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385507	GCA_000569795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/795/GCA_000569795.1_Stap_aure_M77238_V1	-	M77238
Staphylococcus aureus M77229	1412766	PRJNA225184	225184	Terrabacteria group	Firmicutes	2.91727	32.7	-	JEBA01	12	3073	2910	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385506	GCA_000569815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/815/GCA_000569815.1_Stap_aure_M77229_V1	-	M77229
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74672	52.1	-	CEYO01	51	4919	4544	3/9/15	2/28/17	Contig	SC	SAMEA1903878	GCA_001356575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/575/GCA_001356575.1_9475_6_53	-	1020976
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35383	65.6	-	CONX01	91	4270	4095	3/23/15	3/11/17	Contig	SC	SAMEA1403739	GCA_001381435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/435/GCA_001381435.1_7314_8_68	-	0286M
Escherichia coli 75	752788	PRJNA47105	47105	Proteobacteria	Gammaproteobacteria	4.59837	50.7	-	AJWT01	254	4752	4372	5/23/12	5/18/17	Contig	Cornell University	SAMN02428993	GCA_000264155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/155/GCA_000264155.1_ASM26415v1	-	75
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14196	39.7	-	CHTD01	81	2276	2042	4/21/15	3/11/17	Contig	SC	SAMEA1024935	GCA_001339215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/215/GCA_001339215.1_6755_3_17	-	SMRU881
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.83241	57	-	NGTW01	19	5850	5522	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521862	GCA_002152765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/765/GCA_002152765.1_ASM215276v1	-	UCI112
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.07005	65.6	-	JTTZ01	210	6958	6606	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105562	GCA_000790145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/145/GCA_000790145.1_AZPAE14863	25367914	AZPAE14863
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	4.08361	39	-	FBXA01	124	3982	3851	1/10/16	3/19/17	Scaffold	SC	SAMEA1466052	GCA_001512135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/135/GCA_001512135.1_7468_2_79	-	A85
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	4.04917	39.1	-	FBXI01	112	3938	3790	1/10/16	3/19/17	Scaffold	SC	SAMEA1317922	GCA_001512155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/155/GCA_001512155.1_7521_8_36	-	D13
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.16052	66.6	-	JTTY01	84	5845	5675	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105563	GCA_000790155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/155/GCA_000790155.1_AZPAE14864	25367914	AZPAE14864
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.66762	56.8	-	NGTY01	9	5651	5380	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521864	GCA_002152775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/775/GCA_002152775.1_ASM215277v1	-	UCI114
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08463	39.6	-	CHOO01	62	2283	2019	4/21/15	3/11/17	Contig	SC	SAMEA1024949	GCA_001339255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/255/GCA_001339255.1_6680_4_2	-	type strain: N
Escherichia coli HM605	752789	PRJNA47107	47107	Proteobacteria	Gammaproteobacteria	5.12207	50.6	-	AJWU01	289	5454	5050	5/23/12	5/18/17	Contig	Cornell University	SAMN02428954	GCA_000264175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/175/GCA_000264175.1_ASM26417v1	-	HM605
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36484	65.6	-	COXB01	106	4304	4081	3/23/15	3/11/17	Contig	SC	SAMEA1403784	GCA_001382075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/075/GCA_001382075.1_7841_6_1	-	1769Z
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7464	52.1	-	CGST01	49	4917	4549	4/21/15	2/28/17	Contig	SC	SAMEA1903879	GCA_001356595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/595/GCA_001356595.1_9475_6_51	-	1019839
Staphylococcus aureus M77225	1412765	PRJNA225183	225183	Terrabacteria group	Firmicutes	2.89648	32.7	-	JEBB01	10	3052	2892	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385505	GCA_000569835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/835/GCA_000569835.1_Stap_aure_M77225_V1	-	M77225
Staphylococcus aureus M77210	1412764	PRJNA225182	225182	Terrabacteria group	Firmicutes	2.90979	32.7	-	JEBC01	22	3069	2944	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385504	GCA_000569855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/855/GCA_000569855.1_Stap_aure_M77210_V1	-	M77210
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74638	52.1	-	CEXE01	49	4921	4554	3/13/15	2/28/17	Contig	SC	SAMEA1903901	GCA_001356655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/655/GCA_001356655.1_9475_6_73	-	1014152
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37986	65.6	-	COVG01	100	4305	4111	3/23/15	3/11/17	Contig	SC	SAMEA1403830	GCA_001382735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/735/GCA_001382735.1_7769_7_38	-	1418S
Escherichia coli KD2	752784	PRJNA47097	47097	Proteobacteria	Gammaproteobacteria	4.96541	50.5	-	AJWP01	264	5064	4737	5/23/12	5/18/17	Contig	Cornell University	SAMN02429041	GCA_000264195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/195/GCA_000264195.1_ASM26419v1	-	KD2
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	1.99524	39.7	-	CGXL01	37	2167	1957	4/21/15	3/5/17	Contig	SC	SAMEA1024950	GCA_001339275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/275/GCA_001339275.1_6755_4_20	-	21
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.66427	57.2	-	NGTZ01	14	5522	5174	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521865	GCA_002152815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/815/GCA_002152815.1_ASM215281v1	-	UCI115
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.89496	65.8	-	JTTX01	133	6578	6317	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105564	GCA_000790185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/185/GCA_000790185.1_AZPAE14865	25367914	AZPAE14865
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	4.00129	39.1	-	FBWX01	118	3880	3745	1/10/16	3/19/17	Scaffold	SC	SAMEA1465988	GCA_001512175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/175/GCA_001512175.1_7468_2_75	-	6772166
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	4.07247	39	-	FBXF01	109	3950	3813	1/10/16	3/19/17	Scaffold	SC	SAMEA1466028	GCA_001512195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/195/GCA_001512195.1_7468_2_95	-	G7
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.45295	66.3	-	JTTW01	124	6132	5917	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105565	GCA_000790205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/205/GCA_000790205.1_AZPAE14866	25367914	AZPAE14866
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.65455	57	-	NGUA01	9	5589	5301	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521866	GCA_002152825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/825/GCA_002152825.1_ASM215282v1	-	UCI116
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11345	39.7	-	CGWK01	52	2259	1980	4/21/15	3/15/17	Contig	SC	SAMEA1024965	GCA_001339415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/415/GCA_001339415.1_6680_6_16	-	SMRU952
Escherichia coli 541-1	752786	PRJNA47101	47101	Proteobacteria	Gammaproteobacteria	4.99979	50.6	-	AJWR01	383	5185	4818	5/23/12	5/18/17	Contig	Cornell University	SAMN02428958	GCA_000264215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/215/GCA_000264215.1_ASM26421v1	-	541-1
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37066	65.6	-	COVX01	111	4298	4084	3/23/15	3/12/17	Contig	SC	SAMEA1403849	GCA_001382975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/975/GCA_001382975.1_7769_8_52	-	1519C
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74633	52.1	-	CGSS01	44	4915	4547	4/21/15	2/28/17	Contig	SC	SAMEA1903902	GCA_001356675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/675/GCA_001356675.1_9475_6_76	-	1021788
Staphylococcus aureus M20198	1412763	PRJNA225181	225181	Terrabacteria group	Firmicutes	2.88272	32.7	-	JEBD01	13	3031	2873	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385503	GCA_000569875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/875/GCA_000569875.1_Stap_aure_M20198_V1	-	M20198
Staphylococcus aureus M20180	1412762	PRJNA225180	225180	Terrabacteria group	Firmicutes	2.93338	32.8	-	JEBE01	14	3117	2951	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385502	GCA_000569895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/895/GCA_000569895.1_Stap_aure_M20180_V1	-	M20180
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73958	52	-	CEZP01	41	4915	4556	3/10/15	2/28/17	Contig	SC	SAMEA1903904	GCA_001356695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/695/GCA_001356695.1_9475_6_80	-	A32420
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39075	65.6	-	COMD01	95	4301	4113	3/23/15	3/12/17	Contig	SC	SAMEA1403851	GCA_001383015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/015/GCA_001383015.1_7156_6_37	-	0724N
Escherichia coli CUMT8	752790	PRJNA47109	47109	Proteobacteria	Gammaproteobacteria	4.71371	50.7	-	AJWV01	172	4889	4630	5/23/12	5/18/17	Contig	Cornell University	SAMN02428994	GCA_000264235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/264/235/GCA_000264235.1_ASM26423v1	-	CUMT8
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10683	39.5	-	CFDA01	67	2321	2100	3/15/15	3/5/17	Contig	SC	SAMEA1024973	GCA_001339475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/475/GCA_001339475.1_6755_3_13	-	SMRU877
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.58727	57.1	-	NGUC01	3	5526	5251	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521868	GCA_002152865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/865/GCA_002152865.1_ASM215286v1	-	UCI118
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.78505	66	-	JTTV01	109	6523	6243	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105566	GCA_000790215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/215/GCA_000790215.1_AZPAE14867	25367914	AZPAE14867
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	4.10978	39.1	-	FBWR01	92	4020	3857	1/10/16	3/19/17	Scaffold	SC	SAMEA1709749	GCA_001512215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/215/GCA_001512215.1_9179_4_6	-	A297
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.85864	39	-	FBWU01	53	3698	3583	1/10/16	3/19/17	Scaffold	SC	SAMEA1466082	GCA_001512235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/235/GCA_001512235.1_7468_2_91	-	A83
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.3907	66.4	-	JTTU01	133	6172	5937	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105567	GCA_000790245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/245/GCA_000790245.1_AZPAE14868	25367914	AZPAE14868
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.39876	57.3	-	NGSS01	102	5507	5231	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04325160	GCA_002153085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/085/GCA_002153085.1_ASM215308v1	-	CHS241
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14596	39.5	-	CHTT01	57	2375	2147	4/21/15	3/5/17	Contig	SC	SAMEA1024991	GCA_001339615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/615/GCA_001339615.1_6775_1_1	-	SMRU817
Escherichia coli EC1738	1005535	PRJNA65939	65939	Proteobacteria	Gammaproteobacteria	5.47816	50.4	-	AKMN01	62	5853	5327	6/12/12	2/22/17	Contig	Institute for Genome Sciences	SAMN02435976	GCA_000267025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/025/GCA_000267025.1_ASM26702v1	23516226	EC1738
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36538	65.6	-	COUL01	108	4293	4080	3/22/15	3/12/17	Contig	SC	SAMEA1403865	GCA_001383235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/235/GCA_001383235.1_7769_7_14	-	1233R
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.77966	52.1	-	CGMQ01	56	4979	4609	4/21/15	2/28/17	Contig	SC	SAMEA1929442	GCA_001356775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/775/GCA_001356775.1_10592_2_16	-	3163
Staphylococcus aureus M16586	1412760	PRJNA225178	225178	Terrabacteria group	Firmicutes	2.86059	32.8	-	JEBF01	32	2985	2850	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385500	GCA_000569915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/915/GCA_000569915.1_Stap_aure_M16586_V1	-	M16586
Staphylococcus aureus M13065	1412758	PRJNA225176	225176	Terrabacteria group	Firmicutes	2.81996	32.8	-	JEBG01	23	2931	2791	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385498	GCA_000569935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/935/GCA_000569935.1_Stap_aure_M13065_V1	-	M13065
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7373	52.1	-	CGMY01	44	4906	4553	4/21/15	2/28/17	Contig	SC	SAMEA1929456	GCA_001356835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/835/GCA_001356835.1_10592_2_17	-	11193
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36506	65.6	-	COUJ01	105	4296	4090	3/23/15	3/12/17	Contig	SC	SAMEA1403876	GCA_001383415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/415/GCA_001383415.1_7769_7_13	-	1230N
Escherichia coli EC1734	1005536	PRJNA65941	65941	Proteobacteria	Gammaproteobacteria	5.42791	50.3	-	AKMO01	54	5836	5364	6/12/12	2/22/17	Contig	Institute for Genome Sciences	SAMN02435977	GCA_000267045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/045/GCA_000267045.1_ASM26704v1	23516226	EC1734
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.13542	39.7	-	CICK01	87	2382	2160	4/21/15	3/5/17	Contig	SC	SAMEA1025001	GCA_001339695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/695/GCA_001339695.1_6755_2_11	-	SMRU803
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.71544	57.1	-	NGSW01	5	5818	5595	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521889	GCA_002153105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/105/GCA_002153105.1_ASM215310v1	-	MGH140
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.79609	66.1	-	JTTT01	172	6605	6341	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105568	GCA_000790265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/265/GCA_000790265.1_AZPAE14869	25367914	AZPAE14869
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.94043	39.1	-	FBWZ01	89	3818	3698	1/10/16	3/19/17	Scaffold	SC	SAMEA1317930	GCA_001512255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/512/255/GCA_001512255.1_7521_8_39	-	D3208
Acinetobacter baumannii	470	PRJNA293408	293408	Proteobacteria	Gammaproteobacteria	3.94978	39.1	-	LJAA01	180	3870	3652	1/26/16	3/19/17	Scaffold	Institute of Biomedicine of Seville (IBiS)	SAMN04005087	GCA_001541425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/425/GCA_001541425.1_ASM154142v1	27034482	AbMDR-GLH3
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.34561	66.5	-	JTNA01	85	6025	5844	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105743	GCA_000790285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/285/GCA_000790285.1_AZPAE15046	25367914	AZPAE15046
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.75695	57.1	-	NGSZ01	11	5554	5246	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521898	GCA_002153115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/115/GCA_002153115.1_ASM215311v1	-	MGH149
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12913	39.4	-	CFFQ01	58	2341	2091	3/15/15	3/11/17	Contig	SC	SAMEA1025053	GCA_001339875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/875/GCA_001339875.1_6755_2_15	-	SMRU807
Escherichia coli TW09109	1005520	PRJNA65909	65909	Proteobacteria	Gammaproteobacteria	5.57821	50.3	-	AKLY01	66	6015	5481	6/12/12	2/22/17	Contig	Institute for Genome Sciences	SAMN02435927	GCA_000267065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/065/GCA_000267065.1_ASM26706v1	23516226	TW09109
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3608	65.6	-	COUI01	120	4287	4080	3/22/15	3/12/17	Contig	SC	SAMEA1403882	GCA_001383495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/495/GCA_001383495.1_7769_7_11	-	1191W
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.77103	52.1	-	CGOB01	50	4956	4577	4/21/15	2/28/17	Contig	SC	SAMEA1929459	GCA_001356855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/855/GCA_001356855.1_10592_2_5	-	17311
Staphylococcus aureus M13060	1412757	PRJNA225175	225175	Terrabacteria group	Firmicutes	2.82207	32.8	-	JEBH01	27	2926	2783	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385497	GCA_000569955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/955/GCA_000569955.1_Stap_aure_M13060_V1	-	M13060
Staphylococcus aureus H91384	1412755	PRJNA225173	225173	Terrabacteria group	Firmicutes	2.82269	32.8	-	JEBI01	20	2988	2828	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385495	GCA_000569975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/975/GCA_000569975.1_Stap_aure_H91384_V1	-	H91384
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.97066	51.7	-	CEXL01	55	5179	4805	3/10/15	2/28/17	Contig	SC	SAMEA1929463	GCA_001356895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/895/GCA_001356895.1_10592_2_26	-	21095
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38263	65.6	-	COMN01	99	4304	4111	3/23/15	3/12/17	Contig	SC	SAMEA1403888	GCA_001383575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/575/GCA_001383575.1_7156_6_8	-	1067L
Escherichia coli PA22	1005497	PRJNA65859	65859	Proteobacteria	Gammaproteobacteria	5.49451	50.3	-	AKLI01	75	5933	5392	6/12/12	5/18/17	Contig	Institute for Genome Sciences	SAMN02435925	GCA_000267085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/085/GCA_000267085.1_ASM26708v1	-	PA22
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.04974	39.7	-	CHTZ01	53	2238	2036	4/21/15	3/11/17	Contig	SC	SAMEA1025060	GCA_001339915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/915/GCA_001339915.1_6791_6_22	-	SMRU646
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.43727	57.3	-	NGTK01	4	5380	5154	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521917	GCA_002153155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/155/GCA_002153155.1_ASM215315v1	-	MGH168
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.8991	66.1	-	JTTS01	112	6679	6440	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105569	GCA_000790305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/305/GCA_000790305.1_AZPAE14870	25367914	AZPAE14870
Acinetobacter baumannii	470	PRJNA293408	293408	Proteobacteria	Gammaproteobacteria	4.14343	39.2	-	LIZZ01	207	4094	3857	1/26/16	3/19/17	Scaffold	Institute of Biomedicine of Seville (IBiS)	SAMN04005086	GCA_001541455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/455/GCA_001541455.1_ASM154145v1	27034482	AbMDR-GLH2
Acinetobacter baumannii	470	PRJNA293408	293408	Proteobacteria	Gammaproteobacteria	4.12935	39.2	-	LJAC01	223	4086	3874	1/26/16	3/19/17	Scaffold	Institute of Biomedicine of Seville (IBiS)	SAMN04005089	GCA_001541525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/525/GCA_001541525.1_ASM154152v1	27034482	AbMDR-GLH5
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.05423	65.6	-	JTTR01	222	6885	6564	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105570	GCA_000790325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/325/GCA_000790325.1_AZPAE14871	25367914	AZPAE14871
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.61976	57	-	NGTC01	11	5362	5049	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521905	GCA_002153165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/165/GCA_002153165.1_ASM215316v1	-	MGH156
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	1.99534	39.7	-	CHTQ01	57	2190	1973	4/21/15	3/11/17	Contig	SC	SAMEA1025067	GCA_001339975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/975/GCA_001339975.1_6755_1_15	-	SMRU783
Escherichia coli PA40	1005508	PRJNA65885	65885	Proteobacteria	Gammaproteobacteria	5.52523	50.2	-	AKLQ01	66	6033	5501	6/12/12	2/22/17	Contig	Institute for Genome Sciences	SAMN00760005	GCA_000267105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/105/GCA_000267105.1_ASM26710v1	-	PA40
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36785	65.6	-	COLX01	86	4275	4086	3/23/15	3/12/17	Contig	SC	SAMEA1403894	GCA_001383635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/635/GCA_001383635.1_7156_6_32	-	1540A
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.60275	52.2	-	CGNB01	41	4772	4422	4/21/15	2/28/17	Contig	SC	SAMEA1930145	GCA_001356955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/955/GCA_001356955.1_10592_2_41	-	E98-2107
Staphylococcus aureus H87668	1412754	PRJNA225172	225172	Terrabacteria group	Firmicutes	2.88598	32.8	-	JEBJ01	46	3019	2877	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385494	GCA_000569995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/569/995/GCA_000569995.1_Stap_aure_H87668_V1	-	H87668
Staphylococcus aureus H87628	1412753	PRJNA225171	225171	Terrabacteria group	Firmicutes	2.93502	32.7	-	JEBK01	61	3092	2934	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385493	GCA_000570015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/015/GCA_000570015.1_Stap_aure_H87628_V1	-	H87628
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71527	52.1	-	CGNV01	45	4868	4516	4/21/15	2/28/17	Contig	SC	SAMEA1930148	GCA_001356975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/975/GCA_001356975.1_10592_2_38	-	E98-8119
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36632	65.6	-	CONG01	103	4288	4083	3/22/15	3/12/17	Contig	SC	SAMEA1403901	GCA_001383755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/755/GCA_001383755.1_7156_7_71	-	1039F
Escherichia coli TW06591	1005515	PRJNA65899	65899	Proteobacteria	Gammaproteobacteria	5.47546	50.3	-	AKLT01	45	5858	5402	6/12/12	2/22/17	Contig	Institute for Genome Sciences	SAMN02435920	GCA_000267125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/125/GCA_000267125.1_ASM26712v1	-	TW06591
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12837	39.8	-	CHPJ01	68	2325	2045	4/21/15	3/11/17	Contig	SC	SAMEA1025084	GCA_001340035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/035/GCA_001340035.1_6680_4_11	-	type strain: N
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.83142	56.9	-	NGTF01	8	5648	5302	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521910	GCA_002153175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/175/GCA_002153175.1_ASM215317v1	-	MGH161
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.69737	66.1	-	JTNH01	112	6374	6148	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105736	GCA_000790345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/345/GCA_000790345.1_AZPAE15039	25367914	AZPAE15039
Acinetobacter baumannii	470	PRJNA293408	293408	Proteobacteria	Gammaproteobacteria	3.97522	39.3	-	LJAE01	463	3970	3712	1/26/16	3/19/17	Scaffold	Institute of Biomedicine of Seville (IBiS)	SAMN04005091	GCA_001541685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/685/GCA_001541685.1_ASM154168v1	-	AbMDR-GLH7
Acinetobacter baumannii	470	PRJNA293408	293408	Proteobacteria	Gammaproteobacteria	4.12305	39.2	-	LJAD01	196	4079	3853	1/26/16	3/19/17	Scaffold	Institute of Biomedicine of Seville (IBiS)	SAMN04005090	GCA_001541695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/695/GCA_001541695.1_ASM154169v1	27034482	AbMDR-GLH6
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.25092	65.5	-	JTTQ01	140	7152	6871	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105571	GCA_000790355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/355/GCA_000790355.1_AZPAE14872	25367914	AZPAE14872
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.92836	56.8	-	NGTQ01	28	5941	5649	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521855	GCA_002153215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/215/GCA_002153215.1_ASM215321v1	-	UCI105
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.1097	39.5	-	CGXR01	64	2317	2103	4/21/15	3/11/17	Contig	SC	SAMEA1025089	GCA_001340075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/075/GCA_001340075.1_6775_2_20	-	SMRU860
Escherichia coli TW10246	1005517	PRJNA65903	65903	Proteobacteria	Gammaproteobacteria	5.4466	50.3	-	AKLV01	47	5818	5326	6/12/12	2/22/17	Contig	Institute for Genome Sciences	SAMN02435921	GCA_000267145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/145/GCA_000267145.1_ASM26714v1	23516226	TW10246
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36724	65.6	-	COOS01	94	4304	4103	3/23/15	3/12/17	Contig	SC	SAMEA1403908	GCA_001383875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/875/GCA_001383875.1_7755_2_11	-	type strain: 0131
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71516	52.1	-	CGNL01	44	4871	4515	4/21/15	2/28/17	Contig	SC	SAMEA1930150	GCA_001356995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/995/GCA_001356995.1_10592_2_68	-	E99-1028
Staphylococcus aureus H85003	1412751	PRJNA225169	225169	Terrabacteria group	Firmicutes	2.87912	32.8	-	JEBL01	37	3043	2865	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385491	GCA_000570035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/035/GCA_000570035.1_Stap_aure_H85003_V1	-	H85003
Staphylococcus aureus H84980	1412750	PRJNA225168	225168	Terrabacteria group	Firmicutes	2.90236	32.8	-	JEBM01	43	3049	2869	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385490	GCA_000570055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/055/GCA_000570055.1_Stap_aure_H84980_V1	-	H84980
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.76456	52.1	-	CGNW01	42	4932	4573	4/21/15	2/28/17	Contig	SC	SAMEA1930154	GCA_001357055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/055/GCA_001357055.1_10592_2_59	-	E99-6359
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36837	65.6	-	CONI01	107	4293	4081	3/23/15	3/11/17	Contig	SC	SAMEA1403909	GCA_001383895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/895/GCA_001383895.1_7156_7_72	-	1040G
Escherichia coli TW11039	1005518	PRJNA65905	65905	Proteobacteria	Gammaproteobacteria	5.59618	50.4	-	AKLW01	71	6092	5562	6/12/12	2/22/17	Contig	Institute for Genome Sciences	SAMN02435981	GCA_000267165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/165/GCA_000267165.1_ASM26716v1	23516226	TW11039
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14326	39.6	-	CHTE01	63	2329	2108	4/21/15	3/11/17	Contig	SC	SAMEA1025104	GCA_001340155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/155/GCA_001340155.1_6755_3_10	-	SMRU874
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.68067	57.1	-	NGTN01	7	5558	5305	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521930	GCA_002153225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/225/GCA_002153225.1_ASM215322v1	-	MGH181
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.25922	66.5	-	JTTP01	184	5997	5717	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105572	GCA_000790385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/385/GCA_000790385.1_AZPAE14873	25367914	AZPAE14873
Acinetobacter baumannii	470	PRJNA293408	293408	Proteobacteria	Gammaproteobacteria	3.87671	39.1	-	LJAF01	276	3787	3614	1/26/16	3/19/17	Scaffold	Institute of Biomedicine of Seville (IBiS)	SAMN04005092	GCA_001541705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/705/GCA_001541705.1_ASM154170v1	27034482	AbMDR-GLH8
Acinetobacter baumannii	470	PRJNA293408	293408	Proteobacteria	Gammaproteobacteria	3.82012	39.3	-	LJAG01	456	3789	3597	1/26/16	3/19/17	Scaffold	Institute of Biomedicine of Seville (IBiS)	SAMN04005093	GCA_001541725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/725/GCA_001541725.1_ASM154172v1	-	AbMDR-GLH9
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.85035	66.1	-	JTTO01	170	6592	6334	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105573	GCA_000790405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/405/GCA_000790405.1_AZPAE14874	25367914	AZPAE14874
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.62698	57.2	-	NGTU01	6	5435	5170	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521860	GCA_002153255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/255/GCA_002153255.1_ASM215325v1	-	UCI110
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.18052	39.5	-	CHHH01	57	2432	2215	4/21/15	3/11/17	Contig	SC	SAMEA1025106	GCA_001340175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/175/GCA_001340175.1_6755_4_11	-	SMRU1139
Escherichia coli TW10119	1005522	PRJNA65913	65913	Proteobacteria	Gammaproteobacteria	5.552	50.3	-	AKMA01	56	5996	5457	6/12/12	2/22/17	Contig	Institute for Genome Sciences	SAMN02435953	GCA_000267185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/267/185/GCA_000267185.1_ASM26718v1	23516226	TW10119
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36642	65.6	-	CONH01	106	4297	4085	3/22/15	3/12/17	Contig	SC	SAMEA1403921	GCA_001384115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/115/GCA_001384115.1_7156_7_73	-	1047P
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72562	52.1	-	CGNG01	47	4903	4543	4/21/15	2/28/17	Contig	SC	SAMEA1930158	GCA_001357075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/075/GCA_001357075.1_10592_2_74	-	E99-7012
Staphylococcus aureus H84973	1412749	PRJNA225167	225167	Terrabacteria group	Firmicutes	2.75033	32.7	-	JEBN01	24	2832	2700	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385489	GCA_000570075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/075/GCA_000570075.1_Stap_aure_H84973_V1	-	H84973
Staphylococcus aureus H25872	1412745	PRJNA225163	225163	Terrabacteria group	Firmicutes	2.80395	32.8	-	JEBO01	27	2936	2777	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385485	GCA_000570095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/095/GCA_000570095.1_Stap_aure_H25872_V1	-	H25872
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.83037	52	-	CGOE01	59	5030	4651	4/21/15	2/28/17	Contig	SC	SAMEA1930161	GCA_001357095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/095/GCA_001357095.1_10592_2_62	-	E99-8635
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36814	65.6	-	COOW01	110	4301	4087	3/23/15	3/11/17	Contig	SC	SAMEA1403924	GCA_001384155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/155/GCA_001384155.1_7755_2_13	-	0133W
Escherichia coli EPECa12	670896	PRJNA40273	40273	Proteobacteria	Gammaproteobacteria	5.22707	50.7	-	AKNH01	110	5562	4864	6/14/12	8/8/17	Contig	Institute for Genome Sciences	SAMN00030565	GCA_000268125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/125/GCA_000268125.1_ASM26812v1	-	EPECa12
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.1268	39.5	-	CIHY01	45	2358	2099	4/21/15	3/11/17	Contig	SC	SAMEA1025114	GCA_001340215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/215/GCA_001340215.1_6755_5_3	-	SMRU1155
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	6.09096	56.6	-	NGTL01	18	5701	5371	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521920	GCA_002153275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/275/GCA_002153275.1_ASM215327v1	-	MGH171
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.98074	65.9	-	JTTN01	110	6759	6557	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105574	GCA_000790425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/425/GCA_000790425.1_AZPAE14875	25367914	AZPAE14875
Acinetobacter baumannii	470	PRJNA293408	293408	Proteobacteria	Gammaproteobacteria	3.88648	39.2	-	LJAH01	358	3835	3648	1/26/16	3/19/17	Scaffold	Institute of Biomedicine of Seville (IBiS)	SAMN04005094	GCA_001541765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/765/GCA_001541765.1_ASM154176v1	-	AbMDR-GLH10
Acinetobacter baumannii	470	PRJNA293408	293408	Proteobacteria	Gammaproteobacteria	4.13946	39.2	-	LJAB01	215	4114	3870	1/26/16	3/19/17	Scaffold	Institute of Biomedicine of Seville (IBiS)	SAMN04005088	GCA_001541775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/775/GCA_001541775.1_ASM154177v1	27034482	AbMDR-GLH4
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.38604	66.4	-	JTTM01	84	6055	5844	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105575	GCA_000790445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/445/GCA_000790445.1_AZPAE14876	25367914	AZPAE14876
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.54766	57.2	-	NGTS01	19	5342	5054	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521857	GCA_002153285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/285/GCA_002153285.1_ASM215328v1	-	UCI107
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10394	39.5	-	CFBV01	61	2319	2097	3/15/15	3/11/17	Contig	SC	SAMEA1025118	GCA_001340275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/275/GCA_001340275.1_6753_3_19	-	SMRU1531
Escherichia coli EPEC C342-62	766166	PRJNA49113	49113	Proteobacteria	Gammaproteobacteria	5.24244	50.6	-	AKNI01	47	5618	4985	6/14/12	5/18/17	Contig	Institute for Genome Sciences	SAMN00017229	GCA_000268205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/268/205/GCA_000268205.1_ASM26820v1	-	C342-62
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3642	65.6	-	COLB01	106	4286	4076	3/23/15	3/12/17	Contig	SC	SAMEA1403929	GCA_001384235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/235/GCA_001384235.1_7156_6_1	-	1049R
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74667	52.1	-	CGOY01	53	4926	4556	4/21/15	2/28/17	Contig	SC	SAMEA1930166	GCA_001357175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/175/GCA_001357175.1_10593_2_79	-	E01-7101
Staphylococcus aureus H12930	1412741	PRJNA225159	225159	Terrabacteria group	Firmicutes	2.83021	32.8	-	JEBP01	8	2973	2820	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385481	GCA_000570115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/115/GCA_000570115.1_Stap_aure_H12930_V1	-	H12930
Staphylococcus aureus H12893	1412740	PRJNA225158	225158	Terrabacteria group	Firmicutes	2.89369	32.7	-	JEBQ01	45	2996	2841	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385480	GCA_000570135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/135/GCA_000570135.1_Stap_aure_H12893_V1	-	H12893
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72565	52.1	-	CGPM01	42	4912	4552	4/21/15	2/28/17	Contig	SC	SAMEA1930172	GCA_001357255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/255/GCA_001357255.1_10593_2_81	-	E00-7666
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36849	65.6	-	COLQ01	118	4297	4084	3/23/15	3/11/17	Contig	SC	SAMEA1403950	GCA_001384515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/515/GCA_001384515.1_7156_6_28	-	1082C
Escherichia coli O111:H8 str. CVM9602	1165942	PRJNA129393	129393	Proteobacteria	Gammaproteobacteria	5.09922	50.5	-	AKAV01	268	5518	5061	7/9/12	5/18/17	Contig	FDA	SAMN00996410	GCA_000276745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/745/GCA_000276745.1_EC_O111_H8_CVM9602_v01	23052305	CVM9602
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10215	39.5	-	CHTJ01	54	2305	2061	4/21/15	3/14/17	Contig	SC	SAMEA1025129	GCA_001340355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/355/GCA_001340355.1_6755_5_2	-	SMRU1154
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.59308	57	-	NGTV01	12	5472	5137	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521861	GCA_002153305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/305/GCA_002153305.1_ASM215330v1	-	UCI111
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.64051	66.3	-	JTNE01	99	6414	6072	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105739	GCA_000790465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/465/GCA_000790465.1_AZPAE15042	25367914	AZPAE15042
Acinetobacter baumannii	470	PRJNA293408	293408	Proteobacteria	Gammaproteobacteria	3.92103	39.2	-	LJAI01	347	3877	3689	1/26/16	3/19/17	Scaffold	Institute of Biomedicine of Seville (IBiS)	SAMN04005095	GCA_001541795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/795/GCA_001541795.1_ASM154179v1	-	AbMDR-GLH11
Acinetobacter baumannii	470	PRJNA293408	293408	Proteobacteria	Gammaproteobacteria	3.89341	39	-	LIWE01	175	3812	3618	1/27/16	3/19/17	Scaffold	Institute of Biomedicine of Seville (IBiS)	SAMN04005085	GCA_001541875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/875/GCA_001541875.1_ASM154187v1	27034482	AbMDR-GLH1
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.30007	66.4	-	JTTL01	64	5987	5638	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105576	GCA_000790485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/485/GCA_000790485.1_AZPAE14877	25367914	AZPAE14877
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.31439	57.4	-	NGUB01	6	5311	5112	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521867	GCA_002153315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/315/GCA_002153315.1_ASM215331v1	-	UCI117
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.11211	39.8	-	CHGW01	63	2318	2112	4/21/15	3/11/17	Contig	SC	SAMEA1025139	GCA_001340395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/395/GCA_001340395.1_6710_8_16	-	SMRU1408
Escherichia coli O111:H8 str. CVM9634	1165944	PRJNA129401	129401	Proteobacteria	Gammaproteobacteria	5.76772	50.3	-	AKAW01	454	6426	5809	7/9/12	5/18/17	Contig	FDA	SAMN00996417	GCA_000276765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/765/GCA_000276765.1_EC_O111_H8_CVM9634_1.0	23052305	CVM9634
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36451	65.6	-	COWE01	120	4292	4081	3/22/15	3/12/17	Contig	SC	SAMEA1403960	GCA_001384695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/695/GCA_001384695.1_7769_8_62	-	1648S
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70193	52.1	-	CGNQ01	44	4855	4490	4/21/15	2/28/17	Contig	SC	SAMEA1930177	GCA_001357275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/275/GCA_001357275.1_10593_2_55	-	E99-8067
Staphylococcus aureus F60346	1412739	PRJNA225157	225157	Terrabacteria group	Firmicutes	2.81513	32.8	-	JEBR01	31	2931	2789	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385479	GCA_000570155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/155/GCA_000570155.1_Stap_aure_F60346_V1	-	F60346
Staphylococcus aureus F57036	1412738	PRJNA225156	225156	Terrabacteria group	Firmicutes	2.87795	32.7	-	JEBS01	55	3017	2872	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385478	GCA_000570175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/175/GCA_000570175.1_Stap_aure_F57036_V1	-	F57036
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73642	52	-	CGNO01	40	4893	4539	4/21/15	2/28/17	Contig	SC	SAMEA1930181	GCA_001357295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/295/GCA_001357295.1_10593_2_24	-	E99-2862
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36264	65.6	-	COWF01	121	4290	4079	3/23/15	3/12/17	Contig	SC	SAMEA1403969	GCA_001384795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/795/GCA_001384795.1_7769_8_63	-	1653Y
Escherichia coli O26:H11 str. CVM10224	1165953	PRJNA129431	129431	Proteobacteria	Gammaproteobacteria	5.33751	50.5	-	AKBB01	354	5905	5397	7/9/12	5/18/17	Contig	FDA	SAMN00996446	GCA_000276785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/785/GCA_000276785.1_EC_O26_H11_CVM10224_1.0	-	CVM10224
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.18719	39.5	-	CFBA01	79	2420	2205	3/15/15	3/11/17	Contig	SC	SAMEA1025169	GCA_001340515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/515/GCA_001340515.1_6753_4_11	-	SMRU1547
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.6531	57.2	-	NHZM01	5	5586	5332	5/31/17	6/2/17	Scaffold	Broad Institute	SAMN04521858	GCA_002163225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/225/GCA_002163225.1_ASM216322v1	-	UCI108
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.95392	66	-	JTTK01	151	6689	6421	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105577	GCA_000790505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/505/GCA_000790505.1_AZPAE14878	25367914	AZPAE14878
Acinetobacter baumannii	470	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	4.4269	39.2	-	LRDT01	107	4387	4199	4/6/16	3/20/17	Scaffold	Miami University	SAMN03078660	GCA_001611995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/995/GCA_001611995.1_ASM161199v1	-	AB2828
Acinetobacter baumannii	470	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	4.01025	38.9	-	LRDU01	76	3908	3765	4/6/16	3/20/17	Scaffold	Miami University	SAMN03078661	GCA_001612005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/005/GCA_001612005.1_ASM161200v1	-	AB3340
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.22673	66.5	-	JTTJ01	50	5901	5760	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105578	GCA_000790525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/525/GCA_000790525.1_AZPAE14879	25367914	AZPAE14879
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.72315	57.2	-	NGZK01	152	5897	5603	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06909171	GCA_002164605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/605/GCA_002164605.1_ASM216460v1	-	WCHKP113
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.38531	39.7	-	CGXI01	62	2714	2486	4/21/15	3/11/17	Contig	SC	SAMEA1025175	GCA_001340555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/555/GCA_001340555.1_6755_6_22	-	SMRU1199
Escherichia coli O26:H11 str. CVM10030	1165952	PRJNA129429	129429	Proteobacteria	Gammaproteobacteria	5.493	50.4	-	AKBA01	473	6095	5548	7/9/12	5/18/17	Contig	FDA	SAMN00996445	GCA_000276845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/845/GCA_000276845.1_EC_O26_H11_CVM10030_1.0	23052305	CVM10030
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35808	65.6	-	COMI01	109	4274	4081	3/23/15	3/12/17	Contig	SC	SAMEA1403973	GCA_001384855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/855/GCA_001384855.1_7156_6_7	-	1066K
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73126	52	-	CGPL01	42	4883	4526	4/21/15	2/28/17	Contig	SC	SAMEA1930186	GCA_001357335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/335/GCA_001357335.1_10593_2_78	-	E01-7006
Staphylococcus aureus F57033	1412737	PRJNA225155	225155	Terrabacteria group	Firmicutes	2.8485	32.8	-	JEBT01	46	2966	2830	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385477	GCA_000570195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/195/GCA_000570195.1_Stap_aure_F57033_V1	-	F57033
Staphylococcus aureus F57021	1412736	PRJNA225154	225154	Terrabacteria group	Firmicutes	2.82479	32.8	-	JEBU01	30	2968	2795	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385476	GCA_000570215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/215/GCA_000570215.1_Stap_aure_F57021_V1	-	F57021
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71966	52.1	-	CGOT01	47	4887	4535	4/21/15	2/28/17	Contig	SC	SAMEA1930191	GCA_001357355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/355/GCA_001357355.1_10593_2_39	-	E02-0232
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36582	65.6	-	CORG01	111	4294	4084	3/23/15	3/12/17	Contig	SC	SAMEA1403979	GCA_001384935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/935/GCA_001384935.1_7755_3_95	-	0593W
Escherichia coli O111:H11 str. CVM9455	1165939	PRJNA129407	129407	Proteobacteria	Gammaproteobacteria	6.00211	50.2	-	AKAX01	845	6810	5992	7/9/12	8/8/17	Contig	FDA	SAMN00996418	GCA_000276865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/865/GCA_000276865.1_EC_O111_CVM9455_1.0	23052305	CVM9455
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.05144	39.5	-	CFFS01	65	2246	2045	3/15/15	3/11/17	Contig	SC	SAMEA1025190	GCA_001340715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/715/GCA_001340715.1_6753_2_1	-	SMRU1489
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.72348	57.2	-	NGYZ01	149	5899	5601	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06909170	GCA_002164675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/675/GCA_002164675.1_ASM216467v1	-	WCHKP108
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.86453	66.1	-	JTTI01	84	6619	6441	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105579	GCA_000790545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/545/GCA_000790545.1_AZPAE14880	25367914	AZPAE14880
Acinetobacter baumannii	470	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	4.01213	38.9	-	LRDV01	58	3913	3782	4/6/16	3/20/17	Scaffold	Miami University	SAMN03078662	GCA_001612015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/015/GCA_001612015.1_ASM161201v1	-	AB3560
Acinetobacter baumannii	470	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	3.79503	38.8	-	LRDS01	27	3641	3494	4/6/16	3/20/17	Scaffold	Miami University	SAMN03078659	GCA_001612025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/025/GCA_001612025.1_ASM161202v1	-	AB967
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.70324	66.1	-	JTTH01	370	6627	6259	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105580	GCA_000790565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/565/GCA_000790565.1_AZPAE14881	25367914	AZPAE14881
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.58398	57.2	-	NGZA01	197	5676	5383	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06909169	GCA_002164685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/685/GCA_002164685.1_ASM216468v1	-	WCHKP103
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.16089	39.5	-	CHGY01	42	2403	2157	4/21/15	3/11/17	Contig	SC	SAMEA1025205	GCA_001340795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/795/GCA_001340795.1_6710_8_4	-	23F
Escherichia coli O26:H11 str. CVM9952	1163738	PRJNA94343	94343	Proteobacteria	Gammaproteobacteria	5.49716	50.5	-	AKBC01	442	6040	5509	7/9/12	5/18/17	Contig	US Food and Drug Administration	SAMN00996447	GCA_000276885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/885/GCA_000276885.1_EC_O26_H11_CVM9952_1.0	23052305	CVM9952
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36415	65.6	-	COPF01	96	4280	4086	3/23/15	3/12/17	Contig	SC	SAMEA1403981	GCA_001384975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/975/GCA_001384975.1_7755_2_3	-	0063V
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9305	51.8	-	CGOD01	53	5137	4744	4/21/15	2/28/17	Contig	SC	SAMEA1930199	GCA_001357375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/375/GCA_001357375.1_10593_2_10	-	E02-2159
Staphylococcus aureus F53388	1412732	PRJNA225150	225150	Terrabacteria group	Firmicutes	2.9223	32.8	-	JEBV01	44	3065	2914	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385472	GCA_000570235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/235/GCA_000570235.1_Stap_aure_F53388_V1	-	F53388
Staphylococcus aureus F43252	1412724	PRJNA225142	225142	Terrabacteria group	Firmicutes	2.79408	32.8	-	JEBW01	49	2910	2758	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385464	GCA_000570255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/255/GCA_000570255.1_Stap_aure_F43252_V1	-	F43252
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.76345	52.1	-	CHGA01	42	4929	4568	4/21/15	2/28/17	Contig	SC	SAMEA1930201	GCA_001357395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/395/GCA_001357395.1_10593_2_7	-	E02-0945
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37476	65.6	-	COLU01	103	4295	4079	3/23/15	3/12/17	Contig	SC	SAMEA1403982	GCA_001384995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/995/GCA_001384995.1_7156_6_3	-	1053W
Escherichia coli O111:H11 str. CVM9553	1165947	PRJNA129417	129417	Proteobacteria	Gammaproteobacteria	5.58741	50.4	-	AKAY01	633	6319	5669	7/9/12	5/18/17	Contig	FDA	SAMN00996443	GCA_000276925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/925/GCA_000276925.1_EC_O111_H11_CVM9553_1.0	23052305	CVM9553
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.14802	39.6	-	CGWM01	47	2342	2106	4/21/15	3/5/17	Contig	SC	SAMEA1025216	GCA_001340855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/855/GCA_001340855.1_6710_6_8	-	SMRU1352
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.58614	57.2	-	NGZB01	185	5683	5398	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06909168	GCA_002164695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/695/GCA_002164695.1_ASM216469v1	-	WCHKP97
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.77648	66	-	JTNW01	101	6487	6277	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105721	GCA_000790585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/585/GCA_000790585.1_AZPAE15024	25367914	AZPAE15024
Acinetobacter baumannii	470	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	3.89458	39	-	LRDX01	70	3797	3657	4/6/16	3/20/17	Scaffold	Miami University	SAMN03078664	GCA_001612075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/075/GCA_001612075.1_ASM161207v1	-	AB3785
Acinetobacter baumannii	470	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	4.29458	38.7	-	LRDW01	78	4147	3988	4/6/16	3/20/17	Scaffold	Miami University	SAMN03078663	GCA_001612095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/095/GCA_001612095.1_ASM161209v1	-	AB3638
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.45564	66.4	-	JTTG01	73	6170	5994	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105581	GCA_000790605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/605/GCA_000790605.1_AZPAE14882	25367914	AZPAE14882
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.44307	57.4	-	NGZC01	128	5504	5260	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06909167	GCA_002164725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/725/GCA_002164725.1_ASM216472v1	-	WCHKP95
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09072	39.6	-	CHQC01	47	2294	2067	4/21/15	3/5/17	Contig	SC	SAMEA1025246	GCA_001341015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/015/GCA_001341015.1_6710_8_7	-	SMRU1399
Escherichia coli O26:H11 str. CVM10021	1165950	PRJNA129425	129425	Proteobacteria	Gammaproteobacteria	5.4928	50.3	-	AKAZ01	477	6050	5522	7/9/12	5/18/17	Contig	FDA	SAMN00996444	GCA_000276945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/945/GCA_000276945.1_EC_O26_H11_CVM10021_1.0	23052305	CVM10021
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36441	65.6	-	COLO01	117	4294	4078	3/22/15	3/12/17	Contig	SC	SAMEA1403986	GCA_001385075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/075/GCA_001385075.1_7156_6_24	-	1073S
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82247	52.1	-	CGUL01	51	4997	4631	4/21/15	2/28/17	Contig	SC	SAMEA1930207	GCA_001357455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/455/GCA_001357455.1_10593_2_27	-	Apr-20
Staphylococcus aureus F43221	1412723	PRJNA225141	225141	Terrabacteria group	Firmicutes	2.87759	32.8	-	JEBX01	45	3004	2869	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385463	GCA_000570275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/275/GCA_000570275.1_Stap_aure_F43221_V1	-	F43221
Staphylococcus aureus F43212	1412722	PRJNA225140	225140	Terrabacteria group	Firmicutes	2.85436	32.8	-	JEBY01	73	2975	2820	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385462	GCA_000570295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/295/GCA_000570295.1_Stap_aure_F43212_V1	-	F43212
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.95156	51.9	-	CGOZ01	52	5171	4777	4/21/15	2/28/17	Contig	SC	SAMEA1930217	GCA_001357535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/535/GCA_001357535.1_10593_2_53	-	07-291
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38807	65.6	-	COSH01	96	4294	4109	3/23/15	3/12/17	Contig	SC	SAMEA1404002	GCA_001385355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/355/GCA_001385355.1_7755_4_4	-	0617X
Escherichia coli STEC_O31	754081	PRJNA48267	48267	Proteobacteria	Gammaproteobacteria	5.20308	50.8	-	AFEX01	46	5432	5016	7/26/12	2/22/17	Contig	Institute for Genome Sciences	SAMN00016456	GCA_000281775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/281/775/GCA_000281775.1_ASM28177v1	-	STEC_O31
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.0672	39.7	-	CGWW01	65	2279	2067	4/21/15	3/5/17	Contig	SC	SAMEA1025275	GCA_001341135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/135/GCA_001341135.1_6736_7_9	-	SMRU1281
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.72328	57.2	-	NGZD01	149	5896	5600	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06909166	GCA_002164755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/755/GCA_002164755.1_ASM216475v1	-	WCHKP91
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.52236	66.3	-	JTMT01	87	6249	6061	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105750	GCA_000790625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/625/GCA_000790625.1_AZPAE15053	25367914	AZPAE15053
Acinetobacter baumannii	470	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	4.29529	38.8	-	LRDY01	86	4153	3980	4/6/16	3/20/17	Scaffold	Miami University	SAMN03078665	GCA_001612105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/105/GCA_001612105.1_ASM161210v1	-	AB3806
Acinetobacter baumannii	470	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	4.11378	38.8	-	LRDZ01	45	4005	3869	4/6/16	3/20/17	Scaffold	Miami University	SAMN03078666	GCA_001612115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/115/GCA_001612115.1_ASM161211v1	-	AB3927
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.30939	66.5	-	JTTF01	161	5984	5707	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105582	GCA_000790645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/645/GCA_000790645.1_AZPAE14883	25367914	AZPAE14883
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.49721	57.2	-	NGZE01	95	5581	5329	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06909165	GCA_002164765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/765/GCA_002164765.1_ASM216476v1	-	WCHKP73
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.15466	39.5	-	CGXP01	94	2377	2122	4/21/15	3/6/17	Contig	SC	SAMEA1025288	GCA_001341195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/195/GCA_001341195.1_6805_2_24	-	SMRU1440
Escherichia coli EC302/04	1230480	PRJNA174602	174602	Proteobacteria	Gammaproteobacteria	4.98441	50.7366	plasmid pEC302/04:NZ_CP011493.1/CP011493.1	AMFM01	82	5109	4824	9/17/12	2/25/17	Contig	Institute of Biological Science	SAMN02469950	GCA_000297235.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/297/235/GCA_000297235.3_EC302_04.1	23144425	EC302/04
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3682	65.6	-	COVD01	112	4303	4079	3/23/15	3/12/17	Contig	SC	SAMEA1404004	GCA_001385395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/395/GCA_001385395.1_7769_7_33	-	1392P
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.98854	51.8	-	CGOL01	54	5218	4831	4/21/15	2/28/17	Contig	SC	SAMEA1930220	GCA_001357575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/575/GCA_001357575.1_10593_2_15	-	Jul-08
Staphylococcus aureus F43199	1412721	PRJNA225139	225139	Terrabacteria group	Firmicutes	2.80745	32.8	-	JEBZ01	32	2901	2760	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385461	GCA_000570315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/315/GCA_000570315.1_Stap_aure_F43199_V1	-	F43199
Staphylococcus aureus F36699	1412720	PRJNA225138	225138	Terrabacteria group	Firmicutes	2.90244	32.7	-	JECA01	11	3064	2895	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385460	GCA_000570335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/335/GCA_000570335.1_Stap_aure_F36699_V1	-	F36699
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.89303	51.9	-	CGOW01	53	5097	4722	4/21/15	2/28/17	Contig	SC	SAMEA1930224	GCA_001357615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/615/GCA_001357615.1_10593_2_73	-	Aug-27
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37076	65.6	-	COVE01	113	4290	4081	3/23/15	3/12/17	Contig	SC	SAMEA1404006	GCA_001385435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/435/GCA_001385435.1_7769_7_35	-	1409H
Escherichia coli FRIK920	1005483	PRJNA65779	65779	Proteobacteria	Gammaproteobacteria	5.74127	50.2	-	AMTP01	127	6365	5798	10/4/12	5/18/17	Contig	Institute for Genome Sciences	SAMN00794598	GCA_000302715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/715/GCA_000302715.1_ASM30271v1	-	FRIK920
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.18062	39.5	-	CGXD01	48	2416	2187	4/21/15	3/5/17	Contig	SC	SAMEA1025290	GCA_001341215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/215/GCA_001341215.1_6753_4_14	-	SMRU1550
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.50055	57.2	-	NGZF01	90	5589	5333	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06909164	GCA_002164795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/795/GCA_002164795.1_ASM216479v1	-	WCHKP70
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.43437	66.5	-	JTTE01	44	6088	5946	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105583	GCA_000790655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/655/GCA_000790655.1_AZPAE14884	25367914	AZPAE14884
Acinetobacter baumannii	470	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	3.9052	39	-	LREB01	67	3804	3673	4/6/16	3/20/17	Scaffold	Miami University	SAMN03078668	GCA_001612155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/155/GCA_001612155.1_ASM161215v1	-	AB4026
Acinetobacter baumannii	470	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	3.90396	39	-	LREC01	72	3799	3667	4/6/16	3/20/17	Scaffold	Miami University	SAMN03078669	GCA_001612175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/175/GCA_001612175.1_ASM161217v1	-	AB4027
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.40604	66.2	-	JTTD01	174	6164	5876	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105584	GCA_000790685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/685/GCA_000790685.1_AZPAE14885	25367914	AZPAE14885
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.56999	57.3	-	NGZJ01	114	5719	5461	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06909160	GCA_002164835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/835/GCA_002164835.1_ASM216483v1	-	WCHKP2
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.14351	39.8	-	CGYC01	72	2400	2181	4/21/15	3/5/17	Contig	SC	SAMEA1025311	GCA_001341295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/295/GCA_001341295.1_6807_1_23	-	29
Escherichia coli PA7	1005491	PRJNA65847	65847	Proteobacteria	Gammaproteobacteria	5.74066	50.4	-	AMTQ01	64	6222	5686	10/4/12	2/22/17	Contig	Institute for Genome Sciences	SAMN00794600	GCA_000302735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/302/735/GCA_000302735.1_ASM30273v1	-	PA7
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36237	65.6	-	COYY01	103	4294	4088	3/22/15	3/12/17	Contig	SC	SAMEA1404020	GCA_001385635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/635/GCA_001385635.1_7841_7_73	-	2015R
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.88134	51.9	-	CEZD01	64	5082	4696	3/10/15	2/28/17	Contig	SC	SAMEA1930225	GCA_001357635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/635/GCA_001357635.1_10593_2_64	-	Aug-14
Staphylococcus aureus F36687	1412719	PRJNA225137	225137	Terrabacteria group	Firmicutes	3.00014	32.7	-	JECB01	15	3209	3052	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385459	GCA_000570355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/355/GCA_000570355.1_Stap_aure_F36687_V1	-	F36687
Staphylococcus aureus F36683	1412718	PRJNA225136	225136	Terrabacteria group	Firmicutes	2.83676	32.8	-	JECC01	68	2979	2828	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385458	GCA_000570375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/375/GCA_000570375.1_Stap_aure_F36683_V1	-	F36683
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.91046	51.9	-	CGOO01	49	5132	4754	4/21/15	2/28/17	Contig	SC	SAMEA1930229	GCA_001357675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/675/GCA_001357675.1_10593_2_32	-	Sep-19
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36765	65.6	-	COOD01	97	4287	4082	3/22/15	3/12/17	Contig	SC	SAMEA1404027	GCA_001385775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/775/GCA_001385775.1_7314_8_74	-	0738D
Escherichia coli AD30	1169664	PRJNA157425	157425	Proteobacteria	Gammaproteobacteria	5.07795	50.7	-	AMSK01	117	5302	4929	10/9/12	5/18/17	Contig	Seoul National University	SAMN02470904	GCA_000304255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/255/GCA_000304255.1_ECAD30.1	-	AD30
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10527	39.5	-	CHUJ01	48	2322	2103	4/21/15	3/5/17	Contig	SC	SAMEA1025318	GCA_001341355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/355/GCA_001341355.1_6805_5_14	-	SMRU1694
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.51608	57.3	-	NGZI01	116	5659	5399	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06909161	GCA_002164855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/855/GCA_002164855.1_ASM216485v1	-	WCHKP3
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.05781	65.8	-	JTTC01	135	6826	6547	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105585	GCA_000790705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/705/GCA_000790705.1_AZPAE14886	25367914	AZPAE14886
Acinetobacter baumannii	470	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	3.90267	39	-	LREA01	69	3803	3662	4/6/16	3/20/17	Scaffold	Miami University	SAMN03078667	GCA_001612185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/185/GCA_001612185.1_ASM161218v1	-	AB4025
Acinetobacter baumannii	470	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	4.00181	38.9	-	LREF01	58	3896	3763	4/6/16	3/20/17	Scaffold	Miami University	SAMN03078673	GCA_001612215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/215/GCA_001612215.1_ASM161221v1	-	AB4456
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.90357	66	-	JTTB01	114	6603	6388	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105586	GCA_000790725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/725/GCA_000790725.1_AZPAE14887	25367914	AZPAE14887
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.77082	57.1	-	NGZH01	174	5964	5662	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06909162	GCA_002164875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/875/GCA_002164875.1_ASM216487v1	-	WCHKP10
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.17342	39.5	-	CHSQ01	71	2430	2197	4/21/15	3/11/17	Contig	SC	SAMEA1025334	GCA_001341395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/395/GCA_001341395.1_6753_1_20	-	SMRU1484
Escherichia coli 8.0416	1005463	PRJNA65739	65739	Proteobacteria	Gammaproteobacteria	5.39417	50.3	-	AMTN01	244	5853	5332	10/10/12	2/24/17	Contig	Institute for Genome Sciences	SAMN01036880	GCA_000304835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/835/GCA_000304835.2_ASM30483v2	-	8.0416
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36531	65.6	-	COOJ01	99	4286	4092	3/22/15	3/12/17	Contig	SC	SAMEA1404039	GCA_001385955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/955/GCA_001385955.1_7314_8_77	-	0926H
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69111	52.1	-	CGON01	45	4847	4496	4/21/15	2/28/17	Contig	SC	SAMEA1930230	GCA_001357695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/695/GCA_001357695.1_10593_2_42	-	IPCA
Staphylococcus aureus W92106	1412716	PRJNA225134	225134	Terrabacteria group	Firmicutes	2.91736	32.8	-	JECD01	51	3067	2913	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385456	GCA_000570395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/395/GCA_000570395.1_Stap_aure_W92106_V1	-	W92106
Staphylococcus aureus W81816	1412711	PRJNA225129	225129	Terrabacteria group	Firmicutes	2.93514	32.8	-	JECE01	9	3114	2956	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385451	GCA_000570415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/415/GCA_000570415.1_Stap_aure_W81816_V1	-	W81816
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81539	52.1	-	CEYZ01	42	4987	4623	3/11/15	2/28/17	Contig	SC	SAMEA1930232	GCA_001357715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/715/GCA_001357715.1_10593_2_23	-	IPCE
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3573	65.6	-	CPAB01	96	4275	4081	3/23/15	3/12/17	Contig	SC	SAMEA1469493	GCA_001386275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/275/GCA_001386275.1_7935_3_60	-	2095D
Escherichia coli 10.0821	1005469	PRJNA65751	65751	Proteobacteria	Gammaproteobacteria	5.18859	50.2	-	AMTO01	107	5461	5041	10/10/12	2/24/17	Contig	Institute for Genome Sciences	SAMN01036883	GCA_000304855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/304/855/GCA_000304855.2_ASM30485v2	-	10.0821
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.13734	39.5	-	CHSM01	78	2362	2106	4/21/15	3/11/17	Contig	SC	SAMEA1025338	GCA_001341435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/435/GCA_001341435.1_6753_1_19	-	SMRU1483
Klebsiella pneumoniae	573	PRJNA354908	354908	Proteobacteria	Gammaproteobacteria	5.48984	57.3	-	MQUV01	154	5524	5162	6/5/17	9/19/17	Scaffold	Istituto Superiore di Sanita	SAMN06099206	GCA_002167025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/025/GCA_002167025.1_ASM216702v1	28785421	H151440672
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.73963	66.1	-	JTNF01	191	6498	6216	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105738	GCA_000790735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/735/GCA_000790735.1_AZPAE15041	25367914	AZPAE15041
Acinetobacter baumannii	470	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	3.92134	39	-	LRED01	43	3773	3643	4/6/16	3/20/17	Scaffold	Miami University	SAMN03078670	GCA_001612235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/235/GCA_001612235.1_ASM161223v1	-	AB4052
Acinetobacter baumannii	470	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	3.99226	38.9	-	LREE01	43	3874	3756	4/6/16	3/20/17	Scaffold	Miami University	SAMN03078672	GCA_001612255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/255/GCA_001612255.1_ASM161225v1	-	AB4448
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.97897	66	-	JTND01	109	6700	6444	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105740	GCA_000790765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/765/GCA_000790765.1_AZPAE15043	25367914	AZPAE15043
Klebsiella pneumoniae	573	PRJNA354908	354908	Proteobacteria	Gammaproteobacteria	5.48523	57.3	-	MQUX01	211	5572	5129	6/5/17	9/20/17	Scaffold	Istituto Superiore di Sanita	SAMN06099674	GCA_002167075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/075/GCA_002167075.1_ASM216707v1	28785421	H151400610
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.06252	39.7	-	CHUH01	47	2303	2072	4/21/15	3/11/17	Contig	SC	SAMEA1025351	GCA_001341475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/475/GCA_001341475.1_6805_5_22	-	SMRU1702
Escherichia coli O26:H11 str. CFSAN001629	1232150	PRJNA175272	175272	Proteobacteria	Gammaproteobacteria	5.44256	50.5	-	AMXO01	259	5997	5527	11/19/12	5/18/17	Contig	FDA	SAMN01731796	GCA_000313405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/405/GCA_000313405.1_CFSAN001629_1.0	23682138	CFSAN001629
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36297	65.6	-	COZQ01	97	4293	4091	3/22/15	3/12/17	Contig	SC	SAMEA1469498	GCA_001386355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/355/GCA_001386355.1_7935_3_49	-	2081N
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.89175	51.9	-	CGOM01	52	5096	4730	4/21/15	2/28/17	Contig	SC	SAMEA1930234	GCA_001357755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/755/GCA_001357755.1_10593_2_34	-	IPCI
Staphylococcus aureus W75539	1412710	PRJNA225128	225128	Terrabacteria group	Firmicutes	2.889	32.8	-	JECF01	48	3021	2876	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385450	GCA_000570435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/435/GCA_000570435.1_Stap_aure_W75539_V1	-	W75539
Staphylococcus aureus W75119	1412708	PRJNA225126	225126	Terrabacteria group	Firmicutes	2.82372	32.7	-	JECG01	16	2964	2813	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385448	GCA_000570455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/455/GCA_000570455.1_Stap_aure_W75119_V1	-	W75119
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.95113	51.9	-	CGNU01	47	5153	4774	4/21/15	2/28/17	Contig	SC	SAMEA1930236	GCA_001357775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/775/GCA_001357775.1_10593_2_35	-	IPCL
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36449	65.6	-	CPAP01	96	4292	4082	3/23/15	3/12/17	Contig	SC	SAMEA1469503	GCA_001386455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/455/GCA_001386455.1_7935_3_93	-	0145J
Escherichia coli O111:H11 str. CFSAN001630	1232151	PRJNA175273	175273	Proteobacteria	Gammaproteobacteria	5.6405	50.3	-	AMXP01	435	6279	5690	11/19/12	5/18/17	Contig	FDA	SAMN01731797	GCA_000313425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/425/GCA_000313425.1_CFSAN001630_1.0	-	CFSAN001630
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	1.94691	39.8	-	CHSB01	38	2124	1910	4/21/15	3/11/17	Contig	SC	SAMEA1025378	GCA_001341575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/575/GCA_001341575.1_6736_4_6	-	SMRU1206
Klebsiella pneumoniae	573	PRJNA354908	354908	Proteobacteria	Gammaproteobacteria	5.63688	56.8	-	MQUY01	546	5998	5061	6/5/17	9/19/17	Scaffold	Istituto Superiore di Sanita	SAMN06099675	GCA_002167115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/167/115/GCA_002167115.1_ASM216711v1	28785421	H151400611
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.68056	66.2	-	JTTA01	101	6363	6152	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105587	GCA_000790785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/785/GCA_000790785.1_AZPAE14888	25367914	AZPAE14888
Acinetobacter baumannii	470	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	3.9474	39	-	LREG01	98	3826	3698	4/6/16	3/20/17	Scaffold	Miami University	SAMN03078674	GCA_001612275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/275/GCA_001612275.1_ASM161227v1	-	AB4490
Acinetobacter baumannii	470	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	3.90518	39	-	LREH01	76	3817	3668	4/6/16	3/20/17	Scaffold	Miami University	SAMN03078675	GCA_001612285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/285/GCA_001612285.1_ASM161228v1	-	AB4498
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.47947	66.3	-	JTSZ01	85	6155	5967	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105588	GCA_000790805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/805/GCA_000790805.1_AZPAE14889	25367914	AZPAE14889
Klebsiella pneumoniae	573	PRJNA360233	360233	Proteobacteria	Gammaproteobacteria	5.55191	57.1	-	MSYU01	201	5501	5224	6/9/17	6/12/17	Scaffold	UR12SP37-EA7361	SAMN06205255	GCA_002189165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/165/GCA_002189165.1_ASM218916v1	-	C3-D9-12
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.03512	39.7	-	CFAZ01	71	2236	2030	3/15/15	3/11/17	Contig	SC	SAMEA1025380	GCA_001341615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/615/GCA_001341615.1_6753_1_17	-	SMRU1481
Escherichia coli O111:H8 str. CFSAN001632	1232154	PRJNA175275	175275	Proteobacteria	Gammaproteobacteria	5.30031	50.5	-	AMXQ01	238	5762	5262	11/19/12	5/18/17	Contig	FDA	SAMN01731799	GCA_000313445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/445/GCA_000313445.1_CFSAN001632_1.0	23682138	CFSAN001632
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39863	65.6	-	CPAO01	87	4305	4109	3/22/15	3/12/17	Contig	SC	SAMEA1469504	GCA_001386475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/475/GCA_001386475.1_7935_3_94	-	0179W
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73234	52	-	CEYI01	45	4881	4525	3/9/15	2/28/17	Contig	SC	SAMEA1930242	GCA_001357855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/855/GCA_001357855.1_10593_2_76	-	IPCS
Staphylococcus aureus W75113	1412707	PRJNA225125	225125	Terrabacteria group	Firmicutes	2.93152	32.7	-	JECH01	61	3083	2932	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385447	GCA_000570475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/475/GCA_000570475.1_Stap_aure_W75113_V1	-	W75113
Staphylococcus aureus W75098	1412706	PRJNA225124	225124	Terrabacteria group	Firmicutes	2.91382	32.8	-	JECI01	43	3087	2912	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385446	GCA_000570495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/495/GCA_000570495.1_Stap_aure_W75098_V1	-	W75098
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.68067	52.2	-	CEZT01	43	4832	4476	3/13/15	2/28/17	Contig	SC	SAMEA1930243	GCA_001357875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/875/GCA_001357875.1_10593_2_50	-	IPC
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36389	65.6	-	CPAD01	87	4278	4088	3/22/15	3/12/17	Contig	SC	SAMEA1469507	GCA_001386535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/535/GCA_001386535.1_7935_3_64	-	2126M
Escherichia coli 97.0007	1005420	PRJNA65637	65637	Proteobacteria	Gammaproteobacteria	5.12908	50.3	-	ANMC01	283	5524	5029	12/4/12	2/24/17	Contig	Institute for Genome Sciences	SAMN01041350	GCA_000316505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/505/GCA_000316505.2_ASM31650v2	-	97.0007
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10019	39.5	-	CHUO01	62	2292	2060	4/21/15	3/11/17	Contig	SC	SAMEA1025388	GCA_001341655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/655/GCA_001341655.1_6805_3_5	-	SMRU1445
Klebsiella pneumoniae	573	PRJNA360256	360256	Proteobacteria	Gammaproteobacteria	5.57008	57.2	-	MSYW01	336	5614	5320	6/9/17	6/12/17	Scaffold	UR12SP37-EA7361	SAMN06205422	GCA_002189175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/175/GCA_002189175.1_ASM218917v1	-	C5-E1-13
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.01604	66	-	JTSY01	112	6843	6616	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105589	GCA_000790825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/825/GCA_000790825.1_AZPAE14890	25367914	AZPAE14890
Acinetobacter baumannii	470	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	3.88234	39	-	LREI01	78	3772	3624	4/6/16	3/20/17	Scaffold	Miami University	SAMN03078676	GCA_001612315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/315/GCA_001612315.1_ASM161231v1	-	AB4795
Acinetobacter baumannii	470	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	3.86257	39	-	LREJ01	45	3729	3597	4/6/16	3/20/17	Scaffold	Miami University	SAMN03078677	GCA_001612335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/335/GCA_001612335.1_ASM161233v1	-	AB4878
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.89828	66	-	JTMZ01	123	6682	6431	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105744	GCA_000790835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/835/GCA_000790835.1_AZPAE15047	25367914	AZPAE15047
Klebsiella pneumoniae	573	PRJNA360245	360245	Proteobacteria	Gammaproteobacteria	5.51597	57.2	-	MSYV01	183	5472	5238	6/9/17	6/12/17	Scaffold	UR12SP37-EA7361	SAMN06205369	GCA_002189185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/185/GCA_002189185.1_ASM218918v1	-	C4-D10-13
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.18353	39.6	-	CHPL01	68	2409	2187	4/21/15	3/11/17	Contig	SC	SAMEA1025404	GCA_001341735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/735/GCA_001341735.1_6710_7_2	-	SMRU1370
Escherichia coli 99.0678	1005422	PRJNA65641	65641	Proteobacteria	Gammaproteobacteria	5.19267	50.2	-	ANME01	148	5528	5116	12/4/12	2/24/17	Contig	Institute for Genome Sciences	SAMN01041354	GCA_000316545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/545/GCA_000316545.2_ASM31654v2	-	99.0678
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35899	65.6	-	CPIK01	73	4266	4064	3/22/15	3/12/17	Contig	SC	SAMEA1707185	GCA_001387515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/515/GCA_001387515.1_8987_5_14	-	2540P
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.88072	51.9	-	CGOS01	58	5081	4699	4/21/15	2/28/17	Contig	SC	SAMEA1930245	GCA_001357895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/895/GCA_001357895.1_10593_2_72	-	Q0904130
Staphylococcus aureus W64958	1412705	PRJNA225123	225123	Terrabacteria group	Firmicutes	2.94364	32.7	-	JECJ01	21	3130	2965	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385445	GCA_000570515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/515/GCA_000570515.1_Stap_aure_W64958_V1	-	W64958
Staphylococcus aureus W20096	1412703	PRJNA225121	225121	Terrabacteria group	Firmicutes	2.86486	32.8	-	JECK01	30	3025	2851	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385443	GCA_000570535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/535/GCA_000570535.1_Stap_aure_W20096_V1	-	W20096
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.90933	51.9	-	CGNJ01	48	5140	4761	4/21/15	2/28/17	Contig	SC	SAMEA1930253	GCA_001357955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/955/GCA_001357955.1_10592_2_75	-	Sep-32
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.31943	65.6	-	CPCC01	71	4240	4027	3/22/15	3/12/17	Contig	SC	SAMEA1707417	GCA_001389835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/835/GCA_001389835.1_8898_8_60	-	2237H
Escherichia coli 99.0713	1005424	PRJNA65645	65645	Proteobacteria	Gammaproteobacteria	5.21742	50.3	-	ANMF01	120	5562	5142	12/4/12	2/24/17	Contig	Institute for Genome Sciences	SAMN01041355	GCA_000316565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/316/565/GCA_000316565.2_ASM31656v2	-	99.0713
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.03921	39.6	-	CFFP01	55	2244	2039	3/15/15	3/11/17	Contig	SC	SAMEA1025411	GCA_001341755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/755/GCA_001341755.1_6805_5_10	-	SMRU1690
Klebsiella pneumoniae	573	PRJNA360309	360309	Proteobacteria	Gammaproteobacteria	5.53869	57.2	-	MSZB01	242	5608	5333	6/9/17	6/12/17	Scaffold	UR12SP37-EA7361	SAMN06208981	GCA_002189245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/245/GCA_002189245.1_ASM218924v1	-	C10-E6-15
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.44745	66.4	-	JTSX01	66	6140	5989	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105590	GCA_000790865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/865/GCA_000790865.1_AZPAE14891	25367914	AZPAE14891
Acinetobacter baumannii	470	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	3.88204	39	-	LREL01	50	3768	3619	4/6/16	3/20/17	Scaffold	Miami University	SAMN03078679	GCA_001612355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/355/GCA_001612355.1_ASM161235v1	-	AB4957
Acinetobacter baumannii	470	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	3.86597	39	-	LREK01	39	3733	3596	4/6/16	3/20/17	Scaffold	Miami University	SAMN03078678	GCA_001612365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/365/GCA_001612365.1_ASM161236v1	-	AB4932
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.60915	66.1	-	JTSW01	124	6327	6103	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105591	GCA_000790885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/885/GCA_000790885.1_AZPAE14892	25367914	AZPAE14892
Klebsiella pneumoniae	573	PRJNA360299	360299	Proteobacteria	Gammaproteobacteria	5.53628	57.3	-	MSYZ01	302	5487	5198	6/9/17	6/12/17	Scaffold	UR12SP37-EA7361	SAMN06208853	GCA_002189345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/345/GCA_002189345.1_ASM218934v1	-	C8-E4-15
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10917	39.5	-	CGXX01	40	2316	2087	4/21/15	3/11/17	Contig	SC	SAMEA1025416	GCA_001341775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/775/GCA_001341775.1_6805_6_14	-	SMRU1718
Escherichia coli O104:H4 str. 11-02030	1240768	PRJNA174135	174135	Proteobacteria	Gammaproteobacteria	5.43204	50.6	-	AMVR01	43	5788	5351	12/11/12	2/22/17	Contig	Broad Institute	SAMN01141737	GCA_000319995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/319/995/GCA_000319995.1_Esch_coli_11-02030_V1	-	11-02030
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35663	65.6	-	CPIH01	81	4278	4064	3/23/15	3/12/17	Contig	SC	SAMEA1707433	GCA_001390015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/015/GCA_001390015.1_8987_5_1	-	2520Q
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71647	52.1	-	CGOI01	42	4871	4512	4/21/15	2/28/17	Contig	SC	SAMEA1930261	GCA_001358035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/035/GCA_001358035.1_10593_2_63	-	Sep-77
Staphylococcus aureus W16028	1412702	PRJNA225120	225120	Terrabacteria group	Firmicutes	2.81276	32.7	-	JECL01	31	2943	2777	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385442	GCA_000570555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/555/GCA_000570555.1_Stap_aure_W16028_V1	-	W16028
Staphylococcus aureus T92889	1412701	PRJNA225119	225119	Terrabacteria group	Firmicutes	2.89197	32.7	-	JECM01	14	3047	2881	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385441	GCA_000570575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/575/GCA_000570575.1_Stap_aure_T92889_V1	-	T92889
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71468	52.1	-	CGOQ01	42	4855	4500	4/21/15	2/28/17	Contig	SC	SAMEA1930262	GCA_001358055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/055/GCA_001358055.1_10593_2_31	-	Dec-58
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35226	65.6	-	CPEV01	80	4273	4054	3/23/15	3/12/17	Contig	SC	SAMEA1707491	GCA_001390495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/495/GCA_001390495.1_8939_3_54	-	2485C
Escherichia coli O104:H4 str. 11-02033-1	1240769	PRJNA174136	174136	Proteobacteria	Gammaproteobacteria	5.43834	50.7	-	AMVS01	52	5802	5361	12/11/12	2/22/17	Contig	Broad Institute	SAMN01141738	GCA_000320015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/320/015/GCA_000320015.1_Esch_coli_11-02033-1_V1	-	11-02033-1
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.14769	39.6	-	CHSW01	62	2340	2120	4/21/15	3/11/17	Contig	SC	SAMEA1025421	GCA_001341795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/795/GCA_001341795.1_6736_5_13	-	SMRU1237
Klebsiella pneumoniae	573	PRJNA360302	360302	Proteobacteria	Gammaproteobacteria	5.48603	57.3	-	MSZA01	192	5565	5318	6/9/17	6/12/17	Scaffold	UR12SP37-EA7361	SAMN06208877	GCA_002189385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/385/GCA_002189385.1_ASM218938v1	-	C9-E5-15
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.7696	66	-	JTSV01	184	6608	6272	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105592	GCA_000790905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/905/GCA_000790905.1_AZPAE14893	25367914	AZPAE14893
Acinetobacter baumannii	470	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	3.78947	39	-	LREN01	33	3619	3497	4/6/16	3/20/17	Scaffold	Miami University	SAMN03078681	GCA_001612395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/395/GCA_001612395.1_ASM161239v1	-	AB5001
Acinetobacter baumannii	470	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	3.87711	39.1	-	LREM01	52	3750	3601	4/6/16	3/20/17	Scaffold	Miami University	SAMN03078680	GCA_001612415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/415/GCA_001612415.1_ASM161241v1	-	AB4991
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.60122	66.3	-	JTNG01	117	6342	6104	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105737	GCA_000790915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/915/GCA_000790915.1_AZPAE15040	25367914	AZPAE15040
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.76628	57.1	-	NGWK01	124	5730	5464	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917660	GCA_002235035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/035/GCA_002235035.1_ASM223503v1	-	67
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.05926	39.7	-	CHGX01	62	2251	2038	4/21/15	3/11/17	Contig	SC	SAMEA1025422	GCA_001341815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/815/GCA_001341815.1_6710_7_20	-	SMRU1388
Escherichia coli O104:H4 str. 11-02092	1240770	PRJNA174137	174137	Proteobacteria	Gammaproteobacteria	5.42094	50.6	-	AMVT01	35	5767	5350	12/11/12	2/22/17	Contig	Broad Institute	SAMN01141739	GCA_000320035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/320/035/GCA_000320035.1_Esch_coli_11-02092_V1	-	11-02092
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35242	65.6	-	CPFD01	65	4272	4065	3/23/15	3/12/17	Contig	SC	SAMEA1707556	GCA_001391155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/155/GCA_001391155.1_8939_3_69	-	2462C
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74952	51.9	-	CVGP01	51	4916	4552	4/2/15	2/28/17	Contig	SC	SAMEA1930265	GCA_001358095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/095/GCA_001358095.1_10593_2_36	-	72-1907
Staphylococcus aureus T92876	1412700	PRJNA225118	225118	Terrabacteria group	Firmicutes	2.84281	32.7	-	JECN01	50	2988	2822	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385440	GCA_000570595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/595/GCA_000570595.1_Stap_aure_T92876_V1	-	T92876
Staphylococcus aureus T89467	1412699	PRJNA225117	225117	Terrabacteria group	Firmicutes	2.8504	32.8	-	JECO01	38	2962	2832	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385439	GCA_000570615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/615/GCA_000570615.1_Stap_aure_T89467_V1	-	T89467
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72067	52	-	CGNC01	40	4891	4516	4/21/15	2/28/17	Contig	SC	SAMEA1930268	GCA_001358135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/135/GCA_001358135.1_10592_2_80	-	E03-6418
Mycobacterium tuberculosis	1773	PRJNA245553	245553	Terrabacteria group	Actinobacteria	4.29816	65.3	-	JRJT01	127	4351	4105	10/30/15	3/13/17	Contig	Corporacion para Investigaciones Biologicas and J Craig Venter Institute	SAMN02819978	GCA_001421035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/421/035/GCA_001421035.1_xdr4v01	26769935	TBR-103
Escherichia coli O104:H4 str. 11-02093	1240771	PRJNA174138	174138	Proteobacteria	Gammaproteobacteria	5.40729	50.6	-	AMVU01	38	5751	5332	12/11/12	2/22/17	Contig	Broad Institute	SAMN01141740	GCA_000320075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/320/075/GCA_000320075.1_Esch_coli_11-02093_V1	-	11-02093
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.1575	39.5	-	CICF01	48	2386	2144	4/21/15	3/11/17	Contig	SC	SAMEA1025424	GCA_001341835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/835/GCA_001341835.1_6805_4_16	-	SMRU1672
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.82965	57	-	NGWL01	166	6000	5743	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917659	GCA_002235055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/055/GCA_002235055.1_ASM223505v1	-	66
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.00375	66	-	JTSU01	134	6796	6553	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105593	GCA_000790935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/935/GCA_000790935.1_AZPAE14894	25367914	AZPAE14894
Acinetobacter baumannii	470	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	3.86925	39	-	LREP01	34	3696	3588	4/6/16	3/20/17	Scaffold	Miami University	SAMN03078683	GCA_001612435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/435/GCA_001612435.1_ASM161243v1	-	AB5674
Acinetobacter baumannii	470	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	3.95948	39	-	LREO01	58	3843	3705	4/6/16	3/20/17	Scaffold	Miami University	SAMN03078682	GCA_001612455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/612/455/GCA_001612455.1_ASM161245v1	-	AB5197
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.33082	66.5	-	JTST01	70	6027	5863	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105594	GCA_000790965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/965/GCA_000790965.1_AZPAE14895	25367914	AZPAE14895
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.85662	57	-	NGWO01	170	6028	5766	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917656	GCA_002235095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/095/GCA_002235095.1_ASM223509v1	-	63
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08618	39.6	-	CGXW01	62	2312	2076	4/21/15	3/11/17	Contig	SC	SAMEA1025439	GCA_001341915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/915/GCA_001341915.1_6805_3_16	-	SMRU1456
Escherichia coli O104:H4 str. 11-02281	1240772	PRJNA174139	174139	Proteobacteria	Gammaproteobacteria	5.43402	50.6	-	AMVV01	46	5785	5353	12/11/12	2/22/17	Contig	Broad Institute	SAMN01141741	GCA_000320095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/320/095/GCA_000320095.1_Esch_coli_11-02281_V1	-	11-02281
Mycobacterium tuberculosis	1773	PRJNA245553	245553	Terrabacteria group	Actinobacteria	4.33012	65.4	-	JRJR01	128	4407	4146	11/13/15	3/13/17	Contig	Corporacion para Investigaciones Biologicas and J Craig Venter Institute	SAMN02819976	GCA_001443085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/443/085/GCA_001443085.1_xdr2v01	27034498	TBR-175
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72621	52.1	-	CHLL01	39	4903	4542	4/21/15	2/28/17	Contig	SC	SAMEA1964713	GCA_001358235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/235/GCA_001358235.1_10071_3_75	-	A105
Staphylococcus aureus T89463	1412698	PRJNA225116	225116	Terrabacteria group	Firmicutes	2.89117	32.7	-	JECP01	82	3056	2870	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385438	GCA_000570635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/635/GCA_000570635.1_Stap_aure_T89463_V1	-	T89463
Staphylococcus aureus T37840	1412696	PRJNA225114	225114	Terrabacteria group	Firmicutes	2.86704	32.8	-	JECQ01	49	2984	2855	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385436	GCA_000570655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/655/GCA_000570655.1_Stap_aure_T37840_V1	-	T37840
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.75013	52.1	-	CHMV01	49	4915	4554	4/21/15	2/28/17	Contig	SC	SAMEA1965836	GCA_001358335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/335/GCA_001358335.1_9953_5_85	-	LNT565
Mycobacterium tuberculosis	1773	PRJNA245553	245553	Terrabacteria group	Actinobacteria	4.30377	65.4	-	JRJQ01	114	4361	4127	11/13/15	3/13/17	Contig	Corporacion para Investigaciones Biologicas and J Craig Venter Institute	SAMN02819975	GCA_001443105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/443/105/GCA_001443105.1_xdr1v01	27034498	TBR-152
Escherichia coli O104:H4 str. 11-02913	1240774	PRJNA174141	174141	Proteobacteria	Gammaproteobacteria	5.43472	50.6	-	AMVX01	37	5792	5352	12/11/12	2/22/17	Contig	Broad Institute	SAMN01141743	GCA_000320115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/320/115/GCA_000320115.1_Esch_coli_11-02913_V1	-	11-02913
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07575	39.5	-	CHUU01	56	2262	2043	4/21/15	3/11/17	Contig	SC	SAMEA1025449	GCA_001341975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/975/GCA_001341975.1_6807_3_21	-	SMRU1629
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.56824	57.3	-	NGWP01	126	5697	5471	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917655	GCA_002235105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/105/GCA_002235105.1_ASM223510v1	-	62
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.70303	66	-	JTNB01	76	6367	6167	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105742	GCA_000790985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/790/985/GCA_000790985.1_AZPAE15045	25367914	AZPAE15045
Acinetobacter baumannii	470	PRJNA307212	307212	Proteobacteria	Gammaproteobacteria	3.95496	38.9	-	LQCM01	56	3862	3719	4/8/16	3/20/17	Scaffold	Zhejiang University	SAMN04376868	GCA_001617825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/825/GCA_001617825.1_ASM161782v1	-	2015ZJAB1
Acinetobacter baumannii	470	PRJNA307212	307212	Proteobacteria	Gammaproteobacteria	3.94397	39	-	LQCO01	41	3799	3667	4/8/16	3/20/17	Scaffold	Zhejiang University	SAMN04376870	GCA_001617835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/835/GCA_001617835.1_ASM161783v1	-	2015ZJAB3
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.72695	66	-	JTNV01	77	6423	6233	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105722	GCA_000791005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/005/GCA_000791005.1_AZPAE15025	25367914	AZPAE15025
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.77728	57.1	-	NGWQ01	170	5939	5698	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917654	GCA_002235115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/115/GCA_002235115.1_ASM223511v1	-	61
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.16463	39.5	-	CHHL01	31	2414	2167	4/21/15	3/11/17	Contig	SC	SAMEA1025465	GCA_001342035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/035/GCA_001342035.1_6805_6_19	-	SMRU1723
Escherichia coli O104:H4 str. 11-03439	1240775	PRJNA174142	174142	Proteobacteria	Gammaproteobacteria	5.43582	50.6	-	AMVY01	42	5792	5355	12/11/12	2/22/17	Contig	Broad Institute	SAMN01141744	GCA_000320135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/320/135/GCA_000320135.1_Esch_coli_11-03439_V1	-	11-03439
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.35161	65.4	-	LKDL01	299	4366	4114	11/17/15	3/13/17	Contig	Columbia University Mailman School of Public Health	SAMN03813798	GCA_001445055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/055/GCA_001445055.1_ASM144505v1	-	H_7300
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73245	52	-	CEWY01	47	4893	4543	3/12/15	2/28/17	Contig	SC	SAMEA1967370	GCA_001358375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/375/GCA_001358375.1_10060_5_31	-	A240
Staphylococcus aureus T34036	1412695	PRJNA225113	225113	Terrabacteria group	Firmicutes	2.94386	32.7	-	JECR01	14	3130	2962	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385435	GCA_000570675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/675/GCA_000570675.1_Stap_aure_T34036_V1	-	T34036
Staphylococcus aureus T34011	1412694	PRJNA225112	225112	Terrabacteria group	Firmicutes	2.94522	32.7	-	JECS01	52	3077	2928	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385434	GCA_000570695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/695/GCA_000570695.1_Stap_aure_T34011_V1	-	T34011
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81375	52	-	CGLJ01	46	4981	4611	4/21/15	2/28/17	Contig	SC	SAMEA1967905	GCA_001358435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/435/GCA_001358435.1_10071_3_50	-	474899
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.34605	65.5	-	LKDS01	289	4315	4077	11/17/15	3/13/17	Contig	Columbia University Mailman School of Public Health	SAMN03813786	GCA_001445215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/215/GCA_001445215.1_ASM144521v1	-	C_14229
Escherichia coli O104:H4 str. 11-03943	1240777	PRJNA174144	174144	Proteobacteria	Gammaproteobacteria	5.43526	50.6	-	AMWA01	42	5780	5350	12/11/12	2/22/17	Contig	Broad Institute	SAMN01141746	GCA_000320155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/320/155/GCA_000320155.1_Esch_coli_11-03943_V1	-	11-03943
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	1.99672	39.8	-	CGXS01	35	2185	1955	4/21/15	3/11/17	Contig	SC	SAMEA1025473	GCA_001342055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/055/GCA_001342055.1_6805_2_18	-	SMRU1434
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.7469	57.2	-	NGWS01	186	5875	5645	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917652	GCA_002235155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/155/GCA_002235155.1_ASM223515v1	-	59
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.44815	66.3	-	JTSS01	171	6196	5950	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105595	GCA_000791025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/025/GCA_000791025.1_AZPAE14897	25367914	AZPAE14897
Acinetobacter baumannii	470	PRJNA307212	307212	Proteobacteria	Gammaproteobacteria	3.96437	38.9	-	LQCN01	53	3866	3723	4/8/16	3/20/17	Scaffold	Zhejiang University	SAMN04376869	GCA_001617885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/885/GCA_001617885.1_ASM161788v1	-	2015ZJAB2
Acinetobacter baumannii	470	PRJNA307212	307212	Proteobacteria	Gammaproteobacteria	4.10121	39.1	-	LQCQ01	67	3997	3857	4/8/16	3/20/17	Scaffold	Zhejiang University	SAMN04376872	GCA_001617915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/915/GCA_001617915.1_ASM161791v1	-	2015ZJAB7
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.57769	66.2	-	JTSR01	134	6293	6068	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105596	GCA_000791035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/035/GCA_000791035.1_AZPAE14898	25367914	AZPAE14898
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.70542	57.2	-	NGWU01	140	5845	5592	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917650	GCA_002235165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/165/GCA_002235165.1_ASM223516v1	-	57
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.16727	39.6	-	CFBY01	52	2373	2105	3/15/15	3/11/17	Contig	SC	SAMEA1025504	GCA_001342115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/115/GCA_001342115.1_6807_1_2	-	SMRU1562
Escherichia coli O104:H4 str. 11-04080	1240776	PRJNA174143	174143	Proteobacteria	Gammaproteobacteria	5.42382	50.6	-	AMVZ01	43	5782	5349	12/11/12	2/22/17	Contig	Broad Institute	SAMN01141745	GCA_000320175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/320/175/GCA_000320175.1_Esch_coli_11-04080_V1	-	11-04080
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.37868	65.5	-	LKIF01	277	4347	4103	11/17/15	3/13/17	Contig	Columbia University Mailman School of Public Health	SAMN03813793	GCA_001445255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/255/GCA_001445255.1_ASM144525v1	-	C4_16679
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93201	51.8	-	CVFF01	55	5128	4742	4/2/15	2/28/17	Contig	SC	SAMEA1968120	GCA_001358495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/495/GCA_001358495.1_10540_1_9	-	dn17
Staphylococcus aureus T30565	1412692	PRJNA225110	225110	Terrabacteria group	Firmicutes	2.91084	32.8	-	JECT01	8	3087	2924	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385432	GCA_000570715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/715/GCA_000570715.1_Stap_aure_T30565_V1	-	T30565
Staphylococcus aureus T23868	1412691	PRJNA225109	225109	Terrabacteria group	Firmicutes	2.82003	32.7	-	JECU01	41	2938	2804	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385431	GCA_000570735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/735/GCA_000570735.1_Stap_aure_T23868_V1	-	T23868
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70941	52.1	-	CGJK01	45	4873	4513	4/21/15	2/28/17	Contig	SC	SAMEA1972208	GCA_001358735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/735/GCA_001358735.1_10060_5_26	-	A235
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.37566	65.5	-	LKIP01	320	4347	4098	11/17/15	3/13/17	Contig	Columbia University Mailman School of Public Health	SAMN03813805	GCA_001445455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/455/GCA_001445455.1_ASM144545v1	-	L_13621
Escherichia coli O157:H7 str. H093800014	1240385	PRJEB641	181342	Proteobacteria	Gammaproteobacteria	5.46658	50.3	-	CAOT01	209	6041	5393	11/22/12	5/18/17	Contig	hpa	SAMEA2272638	GCA_000321145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/321/145/GCA_000321145.1_ASM32114v1	-	H093800014
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07747	39.6	-	CFCZ01	63	2261	2024	3/15/15	3/11/17	Contig	SC	SAMEA1025509	GCA_001342155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/155/GCA_001342155.1_6753_3_10	-	SMRU1522
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.72483	57.2	-	NGWT01	121	5683	5410	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917651	GCA_002235175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/175/GCA_002235175.1_ASM223517v1	-	58
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.47062	66.2	-	JTSQ01	154	6214	5936	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105597	GCA_000791065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/065/GCA_000791065.1_AZPAE14899	25367914	AZPAE14899
Acinetobacter baumannii	470	PRJNA307212	307212	Proteobacteria	Gammaproteobacteria	4.07626	39	-	LQCR01	62	3976	3833	4/8/16	3/20/17	Scaffold	Zhejiang University	SAMN04376873	GCA_001617945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/945/GCA_001617945.1_ASM161794v1	-	2015ZJAB8
Acinetobacter baumannii	470	PRJNA313416	313416	Proteobacteria	Gammaproteobacteria	3.87481	38.9	-	LTCY01	14	3703	3561	5/19/16	3/20/17	Scaffold	University of aberdeen	SAMN04521099	GCA_001648035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/035/GCA_001648035.1_ASM164803v1	-	A457
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.8519	65.8	-	JTSP01	168	6553	6259	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105598	GCA_000791085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/085/GCA_000791085.1_AZPAE14900	25367914	AZPAE14900
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.58019	57.2	-	NGWV01	100	5526	5283	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917649	GCA_002235215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/215/GCA_002235215.1_ASM223521v1	-	56
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.18039	39.6	-	CFHH01	45	2400	2163	3/15/15	3/11/17	Contig	SC	SAMEA1025513	GCA_001342175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/175/GCA_001342175.1_6710_7_11	-	SMRU1379
Escherichia coli KTE105	1169373	PRJNA157665	157665	Proteobacteria	Gammaproteobacteria	4.96796	50.5	-	ANXM01	99	5136	4854	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847691	GCA_000326145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/145/GCA_000326145.1_Esch_coli_KTE105_V1	-	KTE105
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.31774	65.6	-	LKMG01	711	4362	4037	11/17/15	3/13/17	Contig	Columbia University Mailman School of Public Health	SAMN03813780	GCA_001445495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/495/GCA_001445495.1_ASM144549v1	-	AU_8623
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69497	52.1	-	CHFS01	41	4853	4492	4/21/15	2/28/17	Contig	SC	SAMEA1972588	GCA_001358755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/755/GCA_001358755.1_10071_3_68	-	400746
Staphylococcus aureus T20142	1412690	PRJNA225108	225108	Terrabacteria group	Firmicutes	2.87181	32.7	-	JECV01	4	3018	2865	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385430	GCA_000570755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/755/GCA_000570755.1_Stap_aure_T20142_V1	-	T20142
Staphylococcus aureus T20118	1412689	PRJNA225107	225107	Terrabacteria group	Firmicutes	2.89186	32.7	-	JECW01	35	3034	2847	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385429	GCA_000570775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/775/GCA_000570775.1_Stap_aure_T20118_V1	-	T20118
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7194	52	-	CGSU01	40	4886	4528	4/21/15	2/28/17	Contig	SC	SAMEA2055249	GCA_001358855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/855/GCA_001358855.1_10060_6_17	-	SV552
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.32612	65.5	-	LKMF01	784	4414	4011	11/17/15	3/13/17	Contig	Columbia University Mailman School of Public Health	SAMN03813774	GCA_001445515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/515/GCA_001445515.1_ASM144551v1	-	BE_116771
Escherichia coli KTE106	1169374	PRJNA157667	157667	Proteobacteria	Gammaproteobacteria	5.21999	50.4	-	ANXN01	132	5440	5081	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847692	GCA_000326165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/165/GCA_000326165.1_Esch_coli_KTE106_V1	-	KTE106
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.14558	39.7	-	CVKL01	74	2276	2046	4/2/15	3/11/17	Contig	SC	SAMEA1025514	GCA_001342215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/215/GCA_001342215.1_6755_6_8	-	SMRU1184
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.54777	57.2	-	NGWZ01	161	5659	5414	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917645	GCA_002235265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/265/GCA_002235265.1_ASM223526v1	-	52
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.88145	66.2	-	JTSO01	192	6668	6283	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105599	GCA_000791105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/105/GCA_000791105.1_AZPAE14901	25367914	AZPAE14901
Acinetobacter baumannii	470	PRJNA322764	322764	Proteobacteria	Gammaproteobacteria	4.02323	38.9	-	LYTI01	83	3925	3771	6/10/16	3/20/17	Scaffold	"The First Affiliated Hospital,College of Medicine,Zhejiang University"	SAMN05173197	GCA_001661665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/661/665/GCA_001661665.1_ASM166166v1	-	HJ01
Acinetobacter baumannii	470	PRJNA284203	284203	Proteobacteria	Gammaproteobacteria	4.13574	39.2759	plasmid p1M3AC14-8:NZ_CM004453.1/CM004453.1; plasmid p2M3AC14-8:NZ_CM004454.1/CM004454.1	LDDY01	30	4073	3868	6/20/16	4/6/17	Scaffold	University of Puerto Rico-Medical Sciences Campus	SAMN03699770	GCA_001672535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/672/535/GCA_001672535.1_ASM167253v1	27259867	M3AC14-8
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.88693	66.1	-	JTSN01	98	6575	6380	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105600	GCA_000791125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/125/GCA_000791125.1_AZPAE14902	25367914	AZPAE14902
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.6456	57.2	-	NGXA01	148	5749	5517	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917644	GCA_002235295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/295/GCA_002235295.1_ASM223529v1	-	51
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.1161	39.4	-	CHTG01	73	2374	2151	4/21/15	3/11/17	Contig	SC	SAMEA1025526	GCA_001342235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/235/GCA_001342235.1_6753_3_9	-	SMRU1521
Escherichia coli KTE109	1169375	PRJNA157669	157669	Proteobacteria	Gammaproteobacteria	4.72278	50.5	-	ANXO01	52	4822	4573	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847693	GCA_000326185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/185/GCA_000326185.1_Esch_coli_KTE109_V1	-	KTE109
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.30384	65.5	-	LKMH01	1088	4518	3978	11/17/15	3/13/17	Contig	Columbia University Mailman School of Public Health	SAMN03813779	GCA_001445535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/535/GCA_001445535.1_ASM144553v1	-	AH26_28866
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.8031	52.1	-	CGKC01	41	4990	4623	4/21/15	2/28/17	Contig	SC	SAMEA2055251	GCA_001358875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/875/GCA_001358875.1_10060_6_23	-	UI11955
Staphylococcus aureus T17141	1412688	PRJNA225106	225106	Terrabacteria group	Firmicutes	2.88401	32.7	-	JECX01	45	2994	2847	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385428	GCA_000570795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/795/GCA_000570795.1_Stap_aure_T17141_V1	-	T17141
Staphylococcus aureus T17131	1412687	PRJNA225105	225105	Terrabacteria group	Firmicutes	2.85236	32.8	-	JECY01	33	2970	2844	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385427	GCA_000570815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/815/GCA_000570815.1_Stap_aure_T17131_V1	-	T17131
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74377	52.1	-	CGKL01	40	4932	4576	4/21/15	2/28/17	Contig	SC	SAMEA2055254	GCA_001358895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/895/GCA_001358895.1_10060_6_32	-	UI16161
Mycobacterium tuberculosis	1773	PRJNA245553	245553	Terrabacteria group	Actinobacteria	4.32913	65.4	-	JRJS01	108	4371	4131	2/25/16	3/13/17	Contig	Corporacion para Investigaciones Biologicas and J Craig Venter Institute	SAMN02819977	GCA_001573045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/573/045/GCA_001573045.1_xdr3v01	27313305	TBR-102
Escherichia coli KTE117	1169378	PRJNA157675	157675	Proteobacteria	Gammaproteobacteria	4.79098	50.8	-	ANXR01	94	4908	4624	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847696	GCA_000326205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/205/GCA_000326205.1_Esch_coli_KTE117_V1	-	KTE117
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.16217	39.5	-	CFBT01	102	2394	2164	3/15/15	3/11/17	Contig	SC	SAMEA1025536	GCA_001342315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/315/GCA_001342315.1_6736_4_1	-	SMRU1201
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	6.02222	57.1	-	NGXB01	237	6180	5898	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917643	GCA_002235315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/315/GCA_002235315.1_ASM223531v1	-	50
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.84603	65.9	-	JTSM01	208	6584	6276	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105601	GCA_000791145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/145/GCA_000791145.1_AZPAE14903	25367914	AZPAE14903
Acinetobacter baumannii	470	PRJNA322764	322764	Proteobacteria	Gammaproteobacteria	3.95349	38.9	-	MACP01	78	3816	3676	7/6/16	3/20/17	Scaffold	"The First Affiliated Hospital,College of Medicine,Zhejiang University"	SAMN05173200	GCA_001680105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/105/GCA_001680105.1_ASM168010v1	-	HJ03
Acinetobacter baumannii	470	PRJNA322764	322764	Proteobacteria	Gammaproteobacteria	3.95162	38.9	-	MACQ01	69	3824	3678	7/6/16	3/20/17	Scaffold	"The First Affiliated Hospital,College of Medicine,Zhejiang University"	SAMN05173213	GCA_001680115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/115/GCA_001680115.1_ASM168011v1	-	HJ04
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.93785	65.9	-	JTSL01	168	6741	6445	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105602	GCA_000791155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/155/GCA_000791155.1_AZPAE14904	25367914	AZPAE14904
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.46605	57.3	-	NGXF01	141	5536	5312	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917639	GCA_002235355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/355/GCA_002235355.1_ASM223535v1	-	46
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.05128	39.7	-	CFCW01	60	2265	2045	3/15/15	3/5/17	Contig	SC	SAMEA1025565	GCA_001342475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/475/GCA_001342475.1_6710_7_1	-	SMRU1369
Escherichia coli KTE124	1169381	PRJNA157681	157681	Proteobacteria	Gammaproteobacteria	5.12767	50.4	-	ANXU01	127	5348	4962	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847699	GCA_000326225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/225/GCA_000326225.1_Esch_coli_KTE124_V1	-	KTE124
Mycobacterium tuberculosis	1773	PRJNA312026	312026	Terrabacteria group	Actinobacteria	4.37192	65.5	-	LUDZ01	150	4354	4072	3/25/16	3/13/17	Contig	Universiti Sains Malaysia	SAMN04492771	GCA_001597645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/645/GCA_001597645.1_ASM159764v1	-	SIT745/EAI1-MYS
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.76913	52.1	-	CGKQ01	43	4939	4575	4/21/15	2/28/17	Contig	SC	SAMEA2055264	GCA_001358955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/955/GCA_001358955.1_10060_6_62	-	UX229
Staphylococcus aureus T16676	1412686	PRJNA225104	225104	Terrabacteria group	Firmicutes	2.87747	32.8	-	JECZ01	50	3019	2856	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385426	GCA_000570835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/835/GCA_000570835.1_Stap_aure_T16676_V1	-	T16676
Staphylococcus aureus T16669	1412685	PRJNA225103	225103	Terrabacteria group	Firmicutes	2.96874	32.7	-	JEDA01	25	3151	2971	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385425	GCA_000570855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/855/GCA_000570855.1_Stap_aure_T16669_V1	-	T16669
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73768	52.1	-	CGKR01	40	4907	4563	4/21/15	2/28/17	Contig	SC	SAMEA2055441	GCA_001358995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/995/GCA_001358995.1_10060_6_74	-	63714
Mycobacterium tuberculosis	1773	PRJNA319885	319885	Terrabacteria group	Actinobacteria	4.39277	65.6	-	LXGA01	136	4280	4083	5/9/16	3/13/17	Contig	University of Malaya	SAMN04910091	GCA_001640575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/575/GCA_001640575.1_ASM164057v1	-	UM-CSF04
Escherichia coli KTE128	1169383	PRJNA157685	157685	Proteobacteria	Gammaproteobacteria	5.07363	50.7	-	ANXW01	139	5299	4976	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847701	GCA_000326245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/245/GCA_000326245.1_Esch_coli_KTE128_V1	-	KTE128
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.14556	39.5	-	CFFO01	58	2391	2164	3/15/15	3/5/17	Contig	SC	SAMEA1025571	GCA_001342535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/535/GCA_001342535.1_6753_1_2	-	SMRU1466
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.78869	57.1	-	NGXH01	228	5974	5707	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917637	GCA_002235375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/375/GCA_002235375.1_ASM223537v1	-	44
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.83908	66	-	JTRT01	138	6575	6346	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105620	GCA_000791185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/185/GCA_000791185.1_AZPAE14922	25367914	AZPAE14922
Acinetobacter baumannii	470	PRJNA322764	322764	Proteobacteria	Gammaproteobacteria	4.02374	38.9	-	MACT01	84	3931	3794	7/6/16	3/20/17	Scaffold	"The First Affiliated Hospital,College of Medicine,Zhejiang University"	SAMN05173231	GCA_001680185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/185/GCA_001680185.1_ASM168018v1	-	HJ07
Acinetobacter baumannii	470	PRJNA322764	322764	Proteobacteria	Gammaproteobacteria	4.02215	38.9	-	MACU01	88	3931	3787	7/6/16	3/20/17	Scaffold	"The First Affiliated Hospital,College of Medicine,Zhejiang University"	SAMN05173233	GCA_001680195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/195/GCA_001680195.1_ASM168019v1	-	HJ08
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.72471	66.1	-	JTRS01	104	6459	6249	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105621	GCA_000791205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/205/GCA_000791205.1_AZPAE14923	25367914	AZPAE14923
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.86804	57.1	-	NGXI01	235	6051	5776	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917636	GCA_002235395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/395/GCA_002235395.1_ASM223539v1	-	43
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10991	39.6	-	CHHE01	57	2311	2093	4/21/15	3/5/17	Contig	SC	SAMEA1025585	GCA_001342595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/595/GCA_001342595.1_6736_6_17	-	SMRU1265
Escherichia coli KTE129	1169384	PRJNA157687	157687	Proteobacteria	Gammaproteobacteria	5.19076	50.7	-	ANXX01	136	5467	5078	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847702	GCA_000326265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/265/GCA_000326265.1_Esch_coli_KTE129_V1	-	KTE129
Mycobacterium tuberculosis	1773	PRJNA319886	319886	Terrabacteria group	Actinobacteria	4.37111	65.6	-	LXGB01	127	4257	4060	5/9/16	3/13/17	Contig	University of Malaya	SAMN04910094	GCA_001640605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/605/GCA_001640605.1_ASM164060v1	-	UM-CSF06
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.85013	52	-	CGSW01	48	5048	4677	4/21/15	2/28/17	Contig	SC	SAMEA2055446	GCA_001359055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/055/GCA_001359055.1_10060_6_92	-	H094320403
Staphylococcus aureus T16664	1412684	PRJNA225102	225102	Terrabacteria group	Firmicutes	2.89807	32.7	-	JEDB01	8	3047	2889	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385424	GCA_000570875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/875/GCA_000570875.1_Stap_aure_T16664_V1	-	T16664
Staphylococcus aureus S56450	1412683	PRJNA225100	225100	Terrabacteria group	Firmicutes	2.96442	32.7	-	JEDC01	18	3141	2969	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385423	GCA_000570895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/895/GCA_000570895.1_Stap_aure_S56450_V1	-	S56450
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.95376	51.8	-	CHGG01	78	5139	4766	4/21/15	2/28/17	Contig	SC	SAMEA2055639	GCA_001359075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/075/GCA_001359075.1_9870_8_21	-	2010-005196
Mycobacterium tuberculosis	1773	PRJNA319887	319887	Terrabacteria group	Actinobacteria	4.35216	65.6	-	LXGC01	156	4249	4056	5/9/16	3/13/17	Contig	University of Malaya	SAMN04910096	GCA_001640615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/615/GCA_001640615.1_ASM164061v1	-	UM-CSF08
Escherichia coli KTE131	1169385	PRJNA157689	157689	Proteobacteria	Gammaproteobacteria	4.98122	50.5	-	ANXY01	100	5141	4787	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847703	GCA_000326285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/285/GCA_000326285.1_Esch_coli_KTE131_V1	-	KTE131
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.17676	39.5	-	CHTH01	93	2421	2174	4/21/15	3/5/17	Contig	SC	SAMEA1025589	GCA_001342615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/615/GCA_001342615.1_6753_3_13	-	SMRU1525
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.86334	57	-	NGXJ01	154	6033	5770	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917635	GCA_002235415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/415/GCA_002235415.1_ASM223541v1	-	42
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.0423	65.8	-	JTRR01	119	6759	6524	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105622	GCA_000791225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/225/GCA_000791225.1_AZPAE14924	25367914	AZPAE14924
Acinetobacter baumannii	470	PRJNA322764	322764	Proteobacteria	Gammaproteobacteria	3.95349	38.9	-	MACV01	93	3837	3700	7/6/16	3/20/17	Scaffold	"The First Affiliated Hospital,College of Medicine,Zhejiang University"	SAMN05173236	GCA_001680215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/215/GCA_001680215.1_ASM168021v1	-	HJ10
Acinetobacter baumannii	470	PRJNA322764	322764	Proteobacteria	Gammaproteobacteria	3.90727	38.9	-	MACW01	77	3750	3619	7/6/16	3/20/17	Scaffold	"The First Affiliated Hospital,College of Medicine,Zhejiang University"	SAMN05177789	GCA_001680225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/225/GCA_001680225.1_ASM168022v1	-	HJ11
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.43829	66.4	-	JTNT01	70	6164	5994	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105724	GCA_000791235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/235/GCA_000791235.1_AZPAE15027	25367914	AZPAE15027
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.78936	57	-	NGXL01	157	5966	5713	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917633	GCA_002235455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/455/GCA_002235455.1_ASM223545v1	-	40
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.0394	39.6	-	CHUA01	51	2241	2023	4/21/15	3/5/17	Contig	SC	SAMEA1025590	GCA_001342635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/635/GCA_001342635.1_6755_5_8	-	SMRU1160
Escherichia coli KTE133	1169386	PRJNA157691	157691	Proteobacteria	Gammaproteobacteria	4.98354	50.5	-	ANXZ01	66	5081	4767	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847704	GCA_000326305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/305/GCA_000326305.1_Esch_coli_KTE133_V1	-	KTE133
Mycobacterium tuberculosis	1773	PRJNA319890	319890	Terrabacteria group	Actinobacteria	4.37412	65.6	-	LXGE01	126	4277	4098	5/9/16	3/13/17	Contig	University of Malaya	SAMN04910098	GCA_001640705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/705/GCA_001640705.1_ASM164070v1	-	UM-CSF15
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93501	51.8	-	CHMW01	58	5136	4750	4/21/15	2/28/17	Contig	SC	SAMEA2055646	GCA_001359115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/115/GCA_001359115.1_9870_8_42	-	01-2011-000483
Staphylococcus aureus M73703	1412681	PRJNA225098	225098	Terrabacteria group	Firmicutes	2.91256	32.8	-	JEDD01	16	3088	2919	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385421	GCA_000570915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/915/GCA_000570915.1_Stap_aure_M73703_V1	-	M73703
Staphylococcus aureus M73702	1412680	PRJNA225096	225096	Terrabacteria group	Firmicutes	2.84511	32.7	-	JEDE01	9	2985	2821	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385420	GCA_000570935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/935/GCA_000570935.1_Stap_aure_M73702_V1	-	M73702
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.58811	52.1	-	CGIQ01	45	4720	4378	4/21/15	2/28/17	Contig	SC	SAMEA2055787	GCA_001359195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/195/GCA_001359195.1_10060_5_14	-	A154
Mycobacterium tuberculosis	1773	PRJNA321663	321663	Terrabacteria group	Actinobacteria	4.29222	65.5	-	LXWG01	179	4286	4045	5/17/16	3/13/17	Contig	Trinity College Dublin	SAMN05001334	GCA_001645585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/585/GCA_001645585.1_ASM164558v1	-	NZ494
Escherichia coli KTE137	1169387	PRJNA157693	157693	Proteobacteria	Gammaproteobacteria	5.00154	50.5	-	ANYA01	99	5203	4861	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847705	GCA_000326325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/325/GCA_000326325.1_Esch_coli_KTE137_V1	-	KTE137
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07913	39.7	-	CHSA01	26	2318	2097	4/21/15	3/5/17	Contig	SC	SAMEA1025591	GCA_001342655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/655/GCA_001342655.1_6736_4_10	-	SMRU1210
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.85598	57	-	NGXR01	154	6006	5763	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917627	GCA_002235475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/475/GCA_002235475.1_ASM223547v1	-	34
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.46275	66.3	-	JTRQ01	79	6160	5974	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105623	GCA_000791265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/265/GCA_000791265.1_AZPAE14925	25367914	AZPAE14925
Acinetobacter baumannii	470	PRJNA322764	322764	Proteobacteria	Gammaproteobacteria	3.95476	38.9	-	MACR01	81	3846	3700	7/6/16	3/20/17	Scaffold	"The First Affiliated Hospital,College of Medicine,Zhejiang University"	SAMN05173225	GCA_001680265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/265/GCA_001680265.1_ASM168026v1	-	HJ05
Acinetobacter baumannii	470	PRJNA322764	322764	Proteobacteria	Gammaproteobacteria	3.95492	38.9	-	MACS01	87	3837	3691	7/6/16	3/20/17	Scaffold	"The First Affiliated Hospital,College of Medicine,Zhejiang University"	SAMN05173229	GCA_001680285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/285/GCA_001680285.1_ASM168028v1	-	HJ06
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.88632	66	-	JTRP01	77	6650	6450	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105624	GCA_000791275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/275/GCA_000791275.1_AZPAE14926	25367914	AZPAE14926
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.80842	57.1	-	NGXX01	174	5952	5720	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917621	GCA_002235615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/615/GCA_002235615.1_ASM223561v1	-	28
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.13911	39.5	-	CGXV01	76	2397	2129	4/21/15	3/15/17	Contig	SC	SAMEA1025604	GCA_001342695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/695/GCA_001342695.1_6805_3_24	-	SMRU1464
Escherichia coli KTE139	1169389	PRJNA157697	157697	Proteobacteria	Gammaproteobacteria	4.88431	50.7	-	ANYC01	108	5048	4683	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847707	GCA_000326345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/345/GCA_000326345.1_Esch_coli_KTE139_V1	-	KTE139
Mycobacterium tuberculosis	1773	PRJNA315211	315211	Terrabacteria group	Actinobacteria	4.32217	65.5	-	LVJJ01	195	4310	4030	5/17/16	3/13/17	Contig	Vavilov Institute of General Genetics	SAMN04550924	GCA_001645625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/625/GCA_001645625.1_ASM164562v1	-	B9741
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73285	52	-	CGIK01	45	4883	4528	4/21/15	2/28/17	Contig	SC	SAMEA2055898	GCA_001359215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/215/GCA_001359215.1_10060_5_41	-	A252
Staphylococcus aureus M70099	1412679	PRJNA225095	225095	Terrabacteria group	Firmicutes	2.85278	32.8	-	JEDF01	31	3007	2860	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385419	GCA_000570955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/955/GCA_000570955.1_Stap_aure_M70099_V1	-	M70099
Staphylococcus aureus M70073	1412678	PRJNA225094	225094	Terrabacteria group	Firmicutes	2.94706	32.7	-	JEDG01	13	3131	2963	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385418	GCA_000570975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/975/GCA_000570975.1_Stap_aure_M70073_V1	-	M70073
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7332	52	-	CGIN01	46	4890	4541	4/21/15	2/28/17	Contig	SC	SAMEA2055900	GCA_001359255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/255/GCA_001359255.1_10060_5_47	-	A258
Mycobacterium tuberculosis	1773	PRJNA294360	294360	Terrabacteria group	Actinobacteria	4.23526	65.4	-	LJBH01	379	4320	4006	6/14/16	3/13/17	Contig	Shanghai Jiao Tong University School of Medicine	SAMN04023334	GCA_001663055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/663/055/GCA_001663055.1_ASM166305v1	26854371	W146
Escherichia coli KTE148	1169391	PRJNA157701	157701	Proteobacteria	Gammaproteobacteria	5.09991	50.6	-	ANYE01	144	5396	5012	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847709	GCA_000326365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/365/GCA_000326365.1_Esch_coli_KTE148_V1	-	KTE148
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.11396	39.7	-	CHUF01	85	2353	2136	4/21/15	3/5/17	Contig	SC	SAMEA1025612	GCA_001342755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/755/GCA_001342755.1_6805_2_7	-	SMRU1423
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.65002	57	-	NGXZ01	146	5754	5530	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917619	GCA_002235635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/635/GCA_002235635.1_ASM223563v1	-	26
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.88537	65.9	-	JTRO01	105	6633	6402	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105625	GCA_000791305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/305/GCA_000791305.1_AZPAE14927	25367914	AZPAE14927
Acinetobacter baumannii	470	PRJNA322764	322764	Proteobacteria	Gammaproteobacteria	3.91876	38.9	-	MACX01	83	3765	3629	7/6/16	3/20/17	Scaffold	"The First Affiliated Hospital,College of Medicine,Zhejiang University"	SAMN05177790	GCA_001680295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/295/GCA_001680295.1_ASM168029v1	-	HJ12
Acinetobacter baumannii	470	PRJNA322764	322764	Proteobacteria	Gammaproteobacteria	4.07047	39	-	MACY01	75	3971	3819	7/6/16	3/20/17	Scaffold	"The First Affiliated Hospital,College of Medicine,Zhejiang University"	SAMN05177791	GCA_001680305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/305/GCA_001680305.1_ASM168030v1	-	HJ13
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.25788	66.6	-	JTRN01	48	5953	5813	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105626	GCA_000791325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/325/GCA_000791325.1_AZPAE14928	25367914	AZPAE14928
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	6.16455	57	-	NGXM01	157	6322	6056	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917632	GCA_002235795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/795/GCA_002235795.1_ASM223579v1	-	39
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09363	39.6	-	CGYJ01	53	2350	2092	4/21/15	3/5/17	Contig	SC	SAMEA1025627	GCA_001342795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/795/GCA_001342795.1_6841_7_22	-	SMRU1342
Escherichia coli KTE153	1169393	PRJNA157705	157705	Proteobacteria	Gammaproteobacteria	4.98543	50.5	-	ANYG01	99	5139	4801	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847711	GCA_000326385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/385/GCA_000326385.1_Esch_coli_KTE153_V1	-	KTE153
Mycobacterium tuberculosis	1773	PRJNA305922	305922	Terrabacteria group	Actinobacteria	4.3961	65.5	-	LZLD01	355	4467	4052	6/17/16	3/13/17	Contig	JCVI	SAMN04634162	GCA_001673125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/125/GCA_001673125.1_ASM167312v1	-	1337842.4
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72165	52	-	CGJE01	53	4884	4527	4/21/15	2/28/17	Contig	SC	SAMEA2055905	GCA_001359315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/315/GCA_001359315.1_10060_5_62	-	107364
Staphylococcus aureus M66673	1412677	PRJNA225093	225093	Terrabacteria group	Firmicutes	2.89338	32.8	-	JEDH01	36	3009	2872	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385417	GCA_000570995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/570/995/GCA_000570995.1_Stap_aure_M66673_V1	-	M66673
Staphylococcus aureus M66661	1412676	PRJNA225092	225092	Terrabacteria group	Firmicutes	2.89454	32.7	-	JEDI01	10	3055	2894	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385416	GCA_000571015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/015/GCA_000571015.1_Stap_aure_M66661_V1	-	M66661
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72109	52	-	CGJP01	49	4884	4523	4/21/15	2/28/17	Contig	SC	SAMEA2056042	GCA_001359355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/355/GCA_001359355.1_10060_5_71	-	B1472
Mycobacterium tuberculosis	1773	PRJNA305922	305922	Terrabacteria group	Actinobacteria	4.38252	65.5	-	LZLT01	368	4483	4057	6/17/16	3/13/17	Contig	JCVI	SAMN04634165	GCA_001673395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/673/395/GCA_001673395.1_ASM167339v1	-	1337782.3
Escherichia coli KTE160	1169395	PRJNA157709	157709	Proteobacteria	Gammaproteobacteria	4.988	50.4	-	ANYI01	110	5157	4814	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847713	GCA_000326405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/405/GCA_000326405.1_Esch_coli_KTE160_V1	-	KTE160
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.13959	39.5	-	CICA01	76	2372	2114	4/21/15	3/6/17	Contig	SC	SAMEA1025635	GCA_001342835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/835/GCA_001342835.1_6753_4_13	-	SMRU1549
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.84324	57.1	-	NGXV01	165	6019	5756	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917623	GCA_002235825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/825/GCA_002235825.1_ASM223582v1	-	30
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.25053	66.6	-	JTQY01	85	5902	5736	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105641	GCA_000791345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/345/GCA_000791345.1_AZPAE14943	25367914	AZPAE14943
Acinetobacter baumannii	470	PRJNA322764	322764	Proteobacteria	Gammaproteobacteria	3.92784	38.8	-	MACZ01	67	3793	3654	7/6/16	3/20/17	Scaffold	"The First Affiliated Hospital,College of Medicine,Zhejiang University"	SAMN05178265	GCA_001680345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/345/GCA_001680345.1_ASM168034v1	-	HJ16
Acinetobacter baumannii	470	PRJNA322764	322764	Proteobacteria	Gammaproteobacteria	3.93824	38.8	-	MADA01	69	3804	3669	7/6/16	3/20/17	Scaffold	"The First Affiliated Hospital,College of Medicine,Zhejiang University"	SAMN05178483	GCA_001680365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/365/GCA_001680365.1_ASM168036v1	-	HJ16-2
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.3582	66.4	-	JTNU01	62	6060	5900	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105723	GCA_000791365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/365/GCA_000791365.1_AZPAE15026	25367914	AZPAE15026
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.79841	57.1	-	NGYJ01	207	5955	5686	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917609	GCA_002235945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/945/GCA_002235945.1_ASM223594v1	-	16
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08586	39.7	-	CHSG01	83	2326	2090	4/21/15	3/5/17	Contig	SC	SAMEA1025639	GCA_001342855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/855/GCA_001342855.1_6736_4_24	-	SMRU1224
Escherichia coli KTE163	1169396	PRJNA157711	157711	Proteobacteria	Gammaproteobacteria	5.00076	50.5	-	ANYJ01	99	5217	4873	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847714	GCA_000326425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/425/GCA_000326425.1_Esch_coli_KTE163_V1	-	KTE163
Mycobacterium tuberculosis	1773	PRJNA317032	317032	Terrabacteria group	Actinobacteria	4.37008	65.6	-	MCQY01	120	4304	4092	9/5/16	3/13/17	Contig	University of Otago	SAMN05187972	GCA_001720305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/305/GCA_001720305.1_ASM172030v1	-	M78
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72153	52	-	CGIZ01	44	4877	4522	4/21/15	2/28/17	Contig	SC	SAMEA2056045	GCA_001359375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/375/GCA_001359375.1_10060_5_80	-	B2667
Staphylococcus aureus M62699	1412675	PRJNA225091	225091	Terrabacteria group	Firmicutes	2.86133	32.8	-	JEDJ01	38	2971	2833	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385415	GCA_000571035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/035/GCA_000571035.1_Stap_aure_M62699_V1	-	M62699
Staphylococcus aureus M56985	1412674	PRJNA225090	225090	Terrabacteria group	Firmicutes	2.89834	32.7	-	JEDK01	14	3054	2897	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385414	GCA_000571055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/055/GCA_000571055.1_Stap_aure_M56985_V1	-	M56985
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82958	52	-	CEYS01	45	5017	4648	3/11/15	2/28/17	Contig	SC	SAMEA2056047	GCA_001359415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/415/GCA_001359415.1_10060_5_89	-	1404
Mycobacterium tuberculosis	1773	PRJNA317032	317032	Terrabacteria group	Actinobacteria	4.37381	65.6	-	MCQX01	112	4310	4108	9/5/16	3/13/17	Contig	University of Otago	SAMN04599205	GCA_001720315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/315/GCA_001720315.1_ASM172031v1	-	M67
Escherichia coli KTE168	1169399	PRJNA157717	157717	Proteobacteria	Gammaproteobacteria	5.0994	50.5	-	ANYM01	96	5265	4924	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847717	GCA_000326445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/445/GCA_000326445.1_Esch_coli_KTE168_V1	-	KTE168
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.13352	39.5	-	CFFZ01	48	2358	2123	3/15/15	3/5/17	Contig	SC	SAMEA1025645	GCA_001342895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/895/GCA_001342895.1_6830_3_19	-	6A
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.51441	57.3	-	NGYM01	148	5600	5383	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917606	GCA_002235975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/975/GCA_002235975.1_ASM223597v1	-	13
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.86695	66.1	-	JTQW01	73	6529	6332	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105643	GCA_000791405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/405/GCA_000791405.1_AZPAE14945	25367914	AZPAE14945
Acinetobacter baumannii	470	PRJNA322764	322764	Proteobacteria	Gammaproteobacteria	3.9439	38.8	-	MADB01	69	3827	3673	7/6/16	3/20/17	Scaffold	"The First Affiliated Hospital,College of Medicine,Zhejiang University"	SAMN05178494	GCA_001680375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/375/GCA_001680375.1_ASM168037v1	-	HJ18-2
Acinetobacter baumannii	470	PRJNA322764	322764	Proteobacteria	Gammaproteobacteria	3.94143	38.8	-	MADC01	69	3813	3677	7/6/16	3/20/17	Scaffold	"The First Affiliated Hospital,College of Medicine,Zhejiang University"	SAMN05178495	GCA_001680395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/395/GCA_001680395.1_ASM168039v1	-	HJ19
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.82426	66.1	-	JTQX01	90	6586	6367	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105642	GCA_000791425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/425/GCA_000791425.1_AZPAE14944	25367914	AZPAE14944
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.84242	57	-	NGYX01	144	5960	5719	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917595	GCA_002235985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/235/985/GCA_002235985.1_ASM223598v1	-	2
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10543	39.7	-	CICN01	93	2366	2119	4/21/15	3/11/17	Contig	SC	SAMEA1025668	GCA_001342995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/995/GCA_001342995.1_6807_3_10	-	SMRU1618
Escherichia coli KTE176	1169401	PRJNA157721	157721	Proteobacteria	Gammaproteobacteria	5.01854	50.5	-	ANYO01	89	5233	4889	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847719	GCA_000326465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/465/GCA_000326465.1_Esch_coli_KTE176_V1	-	KTE176
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.31949	65.6	-	MKHQ01	11	4218	4018	10/11/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05830624	GCA_001757405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/405/GCA_001757405.1_ASM175740v1	-	01-R1463
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73804	52.1	-	CGLF01	40	4901	4546	4/21/15	2/28/17	Contig	SC	SAMEA2056201	GCA_001359495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/495/GCA_001359495.1_10071_3_54	-	410323
Staphylococcus aureus M53327	1412672	PRJNA225088	225088	Terrabacteria group	Firmicutes	2.88537	32.7	-	JEDL01	13	3035	2875	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385412	GCA_000571075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/075/GCA_000571075.1_Stap_aure_M53327_V1	-	M53327
Staphylococcus aureus M46077	1412670	PRJNA225086	225086	Terrabacteria group	Firmicutes	2.8853	32.7	-	JEDM01	18	3040	2869	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385410	GCA_000571095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/095/GCA_000571095.1_Stap_aure_M46077_V1	-	M46077
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93366	51.8	-	CHGE01	60	5139	4745	4/21/15	2/28/17	Contig	SC	SAMEA2056494	GCA_001359555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/555/GCA_001359555.1_9870_8_2	-	2008-002399
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3894	65.6	-	MKFW01	15	4267	4088	10/11/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05825228	GCA_001757445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/757/445/GCA_001757445.1_ASM175744v1	-	01-R0904
Escherichia coli KTE179	1169403	PRJNA157725	157725	Proteobacteria	Gammaproteobacteria	5.11874	50.6	-	ANYQ01	84	5351	5025	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847721	GCA_000326485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/485/GCA_000326485.1_Esch_coli_KTE179_V1	-	KTE179
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.16773	39.6	-	CFHL01	55	2387	2174	3/15/15	3/11/17	Contig	SC	SAMEA1025678	GCA_001343095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/095/GCA_001343095.1_6807_3_9	-	SMRU1617
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.78783	57.1	-	NGWR01	169	5924	5680	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917653	GCA_002236145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/236/145/GCA_002236145.1_ASM223614v1	-	60
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.59264	66.3	-	JTQV01	100	6300	6105	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105644	GCA_000791445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/445/GCA_000791445.1_AZPAE14946	25367914	AZPAE14946
Acinetobacter baumannii	470	PRJNA322764	322764	Proteobacteria	Gammaproteobacteria	3.9425	38.8	-	MADD01	64	3812	3674	7/6/16	3/20/17	Scaffold	"The First Affiliated Hospital,College of Medicine,Zhejiang University"	SAMN05178496	GCA_001680425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/425/GCA_001680425.1_ASM168042v1	-	HJ19-2
Acinetobacter baumannii	470	PRJNA322764	322764	Proteobacteria	Gammaproteobacteria	3.94499	38.8	-	MADE01	74	3809	3671	7/6/16	3/20/17	Scaffold	"The First Affiliated Hospital,College of Medicine,Zhejiang University"	SAMN05178517	GCA_001680445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/445/GCA_001680445.1_ASM168044v1	-	HJ20
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.82876	65.9	-	JTQT01	147	6552	6283	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105646	GCA_000791485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/485/GCA_000791485.1_AZPAE14948	25367914	AZPAE14948
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.81812	57.1	-	NGWW01	217	5970	5712	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917648	GCA_002236155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/236/155/GCA_002236155.1_ASM223615v1	-	55
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.15882	39.6	-	CHVC01	58	2381	2147	4/21/15	3/11/17	Contig	SC	SAMEA1025718	GCA_001343175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/175/GCA_001343175.1_6925_3_15	-	SMRU2127
Escherichia coli KTE82	1169363	PRJNA157645	157645	Proteobacteria	Gammaproteobacteria	5.22078	50.6	-	ANYT01	169	5559	5200	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847681	GCA_000326505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/505/GCA_000326505.1_Esch_coli_KTE82_V1	-	KTE82
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39783	65.6	-	MJUS01	5	4278	4103	10/21/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05792585	GCA_001816205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/816/205/GCA_001816205.1_ASM181620v1	-	01-R0712
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93176	51.8	-	CHMN01	50	5128	4758	4/21/15	2/28/17	Contig	SC	SAMEA2056504	GCA_001359595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/595/GCA_001359595.1_9870_8_35	-	2010-009987
Staphylococcus aureus M46070	1412669	PRJNA225085	225085	Terrabacteria group	Firmicutes	2.86536	32.8	-	JEDN01	58	3026	2845	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385409	GCA_000571115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/115/GCA_000571115.1_Stap_aure_M46070_V1	-	M46070
Staphylococcus aureus M46066	1412668	PRJNA225084	225084	Terrabacteria group	Firmicutes	2.81031	32.7	-	JEDO01	29	2915	2789	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385408	GCA_000571135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/135/GCA_000571135.1_Stap_aure_M46066_V1	-	M46066
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73712	52.1	-	CHNC01	75	4894	4548	4/21/15	2/28/17	Contig	SC	SAMEA2056530	GCA_001359615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/615/GCA_001359615.1_9953_5_60	-	A399
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39729	65.6	-	MMEK01	14	4267	4097	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918958	GCA_001839705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/705/GCA_001839705.1_ASM183970v1	-	I0000203-5
Escherichia coli KTE94	1169368	PRJNA157655	157655	Proteobacteria	Gammaproteobacteria	5.08956	50.4	-	ANYX01	122	5286	4927	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847686	GCA_000326525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/525/GCA_000326525.1_Esch_coli_KTE94_V1	-	KTE94
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10665	39.4	-	CFEF01	66	2365	2112	3/15/15	3/11/17	Contig	SC	SAMEA1025725	GCA_001343195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/195/GCA_001343195.1_6823_4_23	-	SMRU1943
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.86254	57.1	-	NGXD01	199	6036	5780	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917641	GCA_002236185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/236/185/GCA_002236185.1_ASM223618v1	-	48
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.89953	66.1	-	JTQS01	77	6585	6391	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105647	GCA_000791495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/495/GCA_000791495.1_AZPAE14949	25367914	AZPAE14949
Acinetobacter baumannii	470	PRJNA322764	322764	Proteobacteria	Gammaproteobacteria	3.94224	38.8	-	MADG01	79	3814	3666	7/6/16	3/20/17	Scaffold	"The First Affiliated Hospital,College of Medicine,Zhejiang University"	SAMN05178485	GCA_001680475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/475/GCA_001680475.1_ASM168047v1	-	HJ18
Acinetobacter baumannii	470	PRJNA326058	326058	Proteobacteria	Gammaproteobacteria	4.37298	39.7	-	MABZ01	1034	4000	3830	7/24/16	3/20/17	Scaffold	Robert Koch Institute	SAMN05257111	GCA_001693095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/095/GCA_001693095.1_ASM169309v1	-	3.5D
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.3328	66.3	-	JTQR01	149	6061	5780	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105648	GCA_000791525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/525/GCA_000791525.1_AZPAE14950	25367914	AZPAE14950
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	6.11001	57.2	-	NGXE01	183	6264	5990	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917640	GCA_002236205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/236/205/GCA_002236205.1_ASM223620v1	-	47
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08057	39.5	-	CGXZ01	253	2304	2086	4/21/15	3/11/17	Contig	SC	SAMEA1025739	GCA_001343235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/235/GCA_001343235.1_6805_7_11	-	SMRU1740
Escherichia coli KTE97	1169370	PRJNA157659	157659	Proteobacteria	Gammaproteobacteria	4.86901	50.6	-	ANYZ01	84	4989	4706	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847688	GCA_000326545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/545/GCA_000326545.1_Esch_coli_KTE97_V1	-	KTE97
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39414	65.6	-	MMEJ01	9	4277	4103	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918959	GCA_001839725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/725/GCA_001839725.1_ASM183972v1	-	I0000673-9
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73901	52.1	-	CGKP01	45	4922	4564	4/21/15	2/28/17	Contig	SC	SAMEA2056543	GCA_001359675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/675/GCA_001359675.1_10060_6_6	-	SV108
Staphylococcus aureus H75143	1412666	PRJNA225082	225082	Terrabacteria group	Firmicutes	2.84955	32.8	-	JEDP01	15	3002	2838	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385406	GCA_000571155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/155/GCA_000571155.1_Stap_aure_H75143_V1	-	H75143
Staphylococcus aureus H71553	1412665	PRJNA225081	225081	Terrabacteria group	Firmicutes	2.88438	32.7	-	JEDQ01	12	3039	2875	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385405	GCA_000571175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/175/GCA_000571175.1_Stap_aure_H71553_V1	-	H71553
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71792	52	-	CGJA01	53	4872	4524	4/21/15	2/28/17	Contig	SC	SAMEA2056546	GCA_001359695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/695/GCA_001359695.1_10060_6_15	-	SV500
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.4065	65.6	-	MMEL01	27	4296	4116	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918957	GCA_001839735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/735/GCA_001839735.1_ASM183973v1	-	I0001390-9
Escherichia coli KTE112	1169376	PRJNA157671	157671	Proteobacteria	Gammaproteobacteria	5.29084	50.4	-	ANXP01	177	5632	5169	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847694	GCA_000326565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/565/GCA_000326565.1_Esch_coli_KTE112_V1	-	KTE112
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11216	39.5	-	CGYH01	47	2342	2122	4/21/15	3/11/17	Contig	SC	SAMEA1025741	GCA_001343255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/255/GCA_001343255.1_6823_4_24	-	SMRU1944
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	6.12719	57	-	NGXK01	163	6277	6030	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917634	GCA_002236245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/236/245/GCA_002236245.1_ASM223624v1	-	41
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.87602	65.9	-	JTQQ01	141	6644	6380	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105649	GCA_000791545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/545/GCA_000791545.1_AZPAE14951	25367914	AZPAE14951
Acinetobacter baumannii	470	PRJNA326058	326058	Proteobacteria	Gammaproteobacteria	3.91939	39.4	-	MABY01	654	3557	3421	7/24/16	3/20/17	Scaffold	Robert Koch Institute	SAMN05257110	GCA_001693105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/105/GCA_001693105.1_ASM169310v1	-	192/2C
Acinetobacter baumannii	470	PRJNA326058	326058	Proteobacteria	Gammaproteobacteria	4.25352	40.6	-	MACA01	1381	3799	3665	7/24/16	3/20/17	Scaffold	Robert Koch Institute	SAMN05257112	GCA_001693115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/115/GCA_001693115.1_ASM169311v1	-	65
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.48457	66.2	-	JTNO01	65	6233	6060	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105729	GCA_000791565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/565/GCA_000791565.1_AZPAE15032	25367914	AZPAE15032
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.71337	57.1	-	NGXT01	194	5849	5626	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917625	GCA_002236265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/236/265/GCA_002236265.1_ASM223626v1	-	32
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09593	39.7	-	CGYR01	58	2261	2028	4/21/15	3/11/17	Contig	SC	SAMEA1025754	GCA_001343275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/275/GCA_001343275.1_6899_7_24	-	SMRU2112
Escherichia coli KTE113	1169377	PRJNA157673	157673	Proteobacteria	Gammaproteobacteria	5.02616	50.4	-	ANXQ01	87	5167	4810	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847695	GCA_000326585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/585/GCA_000326585.1_Esch_coli_KTE113_V1	-	KTE113
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40279	65.6	-	MMEM01	25	4281	4096	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918956	GCA_001839785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/785/GCA_001839785.1_ASM183978v1	-	I0000918-8
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93271	51.8	-	CFAR01	80	5131	4749	3/11/15	2/28/17	Contig	SC	SAMEA2056654	GCA_001359715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/715/GCA_001359715.1_9870_8_50	-	01-2011-000309
Staphylococcus aureus H71538	1412664	PRJNA225080	225080	Terrabacteria group	Firmicutes	2.89956	32.7	-	JEDR01	11	3062	2893	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385404	GCA_000571195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/195/GCA_000571195.1_Stap_aure_H71538_V1	-	H71538
Staphylococcus aureus H68256	1412663	PRJNA225079	225079	Terrabacteria group	Firmicutes	2.86255	32.8	-	JEDS01	36	2999	2861	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385403	GCA_000571215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/215/GCA_000571215.1_Stap_aure_H68256_V1	-	H68256
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93262	51.8	-	CHMK01	61	5133	4752	4/21/15	2/28/17	Contig	SC	SAMEA2056655	GCA_001359735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/735/GCA_001359735.1_9870_8_53	-	2005-011215
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39468	65.6	-	MMEO01	2	4269	4103	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918954	GCA_001839815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/815/GCA_001839815.1_ASM183981v1	-	I0001262-0
Escherichia coli KTE174	1169400	PRJNA157719	157719	Proteobacteria	Gammaproteobacteria	4.98662	50.4	-	ANYN01	111	5148	4802	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847718	GCA_000326605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/605/GCA_000326605.1_Esch_coli_KTE174_V1	-	KTE174
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.18388	39.5	-	CHVA01	61	2425	2184	4/21/15	3/11/17	Contig	SC	SAMEA1025758	GCA_001343295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/295/GCA_001343295.1_6871_1_5	-	SMRU1781
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.85907	57	-	NGXO01	168	5996	5751	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917630	GCA_002236275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/236/275/GCA_002236275.1_ASM223627v1	-	37
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.36519	66.4	-	JTQP01	117	6045	5831	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105650	GCA_000791585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/585/GCA_000791585.1_AZPAE14952	25367914	AZPAE14952
Acinetobacter baumannii	470	PRJNA326058	326058	Proteobacteria	Gammaproteobacteria	4.15014	39.7	-	MACC01	1050	3695	3568	7/24/16	3/20/17	Scaffold	Robert Koch Institute	SAMN05257114	GCA_001693175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/175/GCA_001693175.1_ASM169317v1	-	42R3
Acinetobacter baumannii	470	PRJNA326812	326812	Proteobacteria	Gammaproteobacteria	4.0541	38.8	-	MAKO01	149	3935	3762	8/14/16	3/21/17	Scaffold	Robert Koch Institute	SAMN05292947	GCA_001704675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/675/GCA_001704675.1_ASM170467v1	-	IHIT17886
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.80906	66.2	-	JTQO01	115	6472	6254	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105651	GCA_000791605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/605/GCA_000791605.1_AZPAE14953	25367914	AZPAE14953
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.76827	57	-	NGXN01	160	5948	5699	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917631	GCA_002236305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/236/305/GCA_002236305.1_ASM223630v1	-	38
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11672	39.6	-	CICT01	73	2322	2100	4/21/15	3/11/17	Contig	SC	SAMEA1025773	GCA_001343355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/355/GCA_001343355.1_6823_7_7	-	SMRU1999
Escherichia coli KTE88	1169366	PRJNA157651	157651	Proteobacteria	Gammaproteobacteria	4.95666	50.5	-	ANYV01	104	5133	4767	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847684	GCA_000326625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/625/GCA_000326625.1_Esch_coli_KTE88_V1	-	KTE88
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38474	65.6	-	MMEP01	15	4260	4093	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918953	GCA_001839845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/845/GCA_001839845.1_ASM183984v1	-	I0001269-5
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93264	51.8	-	CEYW01	71	5130	4754	3/11/15	2/28/17	Contig	SC	SAMEA2056656	GCA_001359755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/755/GCA_001359755.1_9870_8_56	-	2011-007660
Staphylococcus aureus H68252	1412662	PRJNA225078	225078	Terrabacteria group	Firmicutes	2.77215	32.8	-	JEDT01	30	2841	2710	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385402	GCA_000571235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/235/GCA_000571235.1_Stap_aure_H68252_V1	-	H68252
Staphylococcus aureus H68244	1412661	PRJNA225077	225077	Terrabacteria group	Firmicutes	2.89197	32.8	-	JEDU01	53	3052	2873	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385401	GCA_000571255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/255/GCA_000571255.1_Stap_aure_H68244_V1	-	H68244
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93417	51.8	-	CHMT01	66	5133	4749	4/21/15	2/28/17	Contig	SC	SAMEA2056663	GCA_001359815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/815/GCA_001359815.1_9870_8_80	-	01-2010-005183
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39318	65.6	-	MMEQ01	9	4292	4115	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918952	GCA_001839865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/865/GCA_001839865.1_ASM183986v1	-	I0001324-8
Escherichia coli KTE90	1169367	PRJNA157653	157653	Proteobacteria	Gammaproteobacteria	4.98235	50.5	-	ANYW01	91	5186	4846	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847685	GCA_000326645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/645/GCA_000326645.1_Esch_coli_KTE90_V1	-	KTE90
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.03529	39.7	-	CIIA01	54	2260	2026	4/21/15	3/11/17	Contig	SC	SAMEA1025789	GCA_001343395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/395/GCA_001343395.1_6983_2_15	-	SMRU2223
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.87467	57	-	NGXU01	172	6033	5772	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917624	GCA_002236315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/236/315/GCA_002236315.1_ASM223631v1	-	31
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.3682	66.5	-	JTQN01	71	6078	5919	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105652	GCA_000791625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/625/GCA_000791625.1_AZPAE14954	25367914	AZPAE14954
Acinetobacter baumannii	470	PRJNA326812	326812	Proteobacteria	Gammaproteobacteria	4.05623	39.2	-	MAKR01	369	3887	3702	8/14/16	3/21/17	Scaffold	Robert Koch Institute	SAMN05292964	GCA_001704685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/685/GCA_001704685.1_ASM170468v1	-	IHIT29106
Acinetobacter baumannii	470	PRJNA326812	326812	Proteobacteria	Gammaproteobacteria	4.10631	39	-	MAKQ01	449	4021	3798	8/14/16	3/21/17	Scaffold	Robert Koch Institute	SAMN05292963	GCA_001704695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/695/GCA_001704695.1_ASM170469v1	-	IHIT25424
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.37559	66.4	-	JTQM01	69	6036	5883	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105653	GCA_000791635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/635/GCA_000791635.1_AZPAE14955	25367914	AZPAE14955
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.70962	57.1	-	NGYE01	165	5832	5611	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917614	GCA_002236345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/236/345/GCA_002236345.1_ASM223634v1	-	21
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.07487	39.7	-	CICQ01	68	2290	2074	4/21/15	3/11/17	Contig	SC	SAMEA1025800	GCA_001343435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/435/GCA_001343435.1_6840_3_1	-	SMRU1801
Escherichia coli KTE99	1169371	PRJNA157661	157661	Proteobacteria	Gammaproteobacteria	5.0433	50.5	-	ANZA01	122	5219	4858	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847689	GCA_000326665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/665/GCA_000326665.1_Esch_coli_KTE99_V1	-	KTE99
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40015	65.6	-	MMES01	5	4282	4116	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918950	GCA_001839895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/895/GCA_001839895.1_ASM183989v1	-	I0000729-9
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70841	52.1	-	CGKE01	46	4873	4521	4/21/15	2/28/17	Contig	SC	SAMEA2056701	GCA_001359855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/855/GCA_001359855.1_10060_6_30	-	UI14598
Staphylococcus aureus H64967	1412660	PRJNA225076	225076	Terrabacteria group	Firmicutes	2.93644	32.7	-	JEDV01	50	3068	2916	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385400	GCA_000571275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/275/GCA_000571275.1_Stap_aure_H64967_V1	-	H64967
Staphylococcus aureus H64962	1412659	PRJNA225075	225075	Terrabacteria group	Firmicutes	2.83985	32.7	-	JEDW01	39	2987	2847	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385399	GCA_000571295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/295/GCA_000571295.1_Stap_aure_H64962_V1	-	H64962
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7078	52.1	-	CGJO01	43	4870	4526	4/21/15	2/28/17	Contig	SC	SAMEA2056708	GCA_001359895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/895/GCA_001359895.1_10060_6_51	-	UI4692
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40714	65.6	-	MMET01	11	4285	4113	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918949	GCA_001839905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/905/GCA_001839905.1_ASM183990v1	-	I0000721-6
Escherichia coli KTE138	1169388	PRJNA157695	157695	Proteobacteria	Gammaproteobacteria	4.63104	50.7	-	ANYB01	81	4792	4543	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847706	GCA_000326685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/685/GCA_000326685.1_Esch_coli_KTE138_V1	-	KTE138
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.18115	39.5	-	CHHU01	47	2399	2177	4/21/15	3/11/17	Contig	SC	SAMEA1025831	GCA_001343495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/495/GCA_001343495.1_6840_3_4	-	SMRU1804
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.89263	57	-	NGYR01	171	6044	5800	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917601	GCA_002236405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/236/405/GCA_002236405.1_ASM223640v1	-	8
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.90129	65.8	-	JTMW01	153	6692	6421	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105747	GCA_000791665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/665/GCA_000791665.1_AZPAE15050	25367914	AZPAE15050
Acinetobacter baumannii	470	PRJNA326812	326812	Proteobacteria	Gammaproteobacteria	4.14562	38.6	-	MAKP01	626	3870	3691	8/14/16	3/21/17	Scaffold	Robert Koch Institute	SAMN05292962	GCA_001704705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/705/GCA_001704705.1_ASM170470v1	-	IHIT17966
Acinetobacter baumannii	470	PRJNA339662	339662	Proteobacteria	Gammaproteobacteria	3.95599	38.9	-	MDWF01	42	3801	3647	9/7/16	3/20/17	Scaffold	Zhejiang University	SAMN05601616	GCA_001721365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/365/GCA_001721365.1_ASM172136v1	-	XH193
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.11011	65.4	-	JTQL01	455	7224	6657	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105654	GCA_000791685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/685/GCA_000791685.1_AZPAE14956	25367914	AZPAE14956
Klebsiella pneumoniae	573	PRJNA385863	385863	Proteobacteria	Gammaproteobacteria	5.77148	57.1	-	NGYB01	182	5892	5669	7/28/17	8/1/17	Scaffold	"Division of Molecular Biology, Immunology and Experimental Medicine, Army Medical Center"	SAMN06917617	GCA_002236425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/236/425/GCA_002236425.1_ASM223642v1	-	24
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	1.97047	39.7	-	CHUT01	43	2169	1960	4/21/15	3/11/17	Contig	SC	SAMEA1025848	GCA_001343575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/575/GCA_001343575.1_6823_4_11	-	SMRU1931
Escherichia coli KTE145	1169390	PRJNA157699	157699	Proteobacteria	Gammaproteobacteria	4.92547	50.5	-	ANYD01	92	5054	4728	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847708	GCA_000326705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/705/GCA_000326705.1_Esch_coli_KTE145_V1	-	KTE145
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.4067	65.6	-	MMEU01	9	4278	4113	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918948	GCA_001839945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/945/GCA_001839945.1_ASM183994v1	-	I0000737-2
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73041	52	-	CGKT01	45	4894	4544	4/21/15	2/28/17	Contig	SC	SAMEA2056710	GCA_001359915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/915/GCA_001359915.1_10060_6_60	-	UI5669
Staphylococcus aureus H64941	1412658	PRJNA225074	225074	Terrabacteria group	Firmicutes	2.93409	32.8	-	JEDX01	56	3072	2909	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385398	GCA_000571315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/315/GCA_000571315.1_Stap_aure_H64941_V1	-	H64941
Staphylococcus aureus H58191	1412656	PRJNA225072	225072	Terrabacteria group	Firmicutes	2.87938	32.8	-	JEDY01	67	3035	2853	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385396	GCA_000571335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/335/GCA_000571335.1_Stap_aure_H58191_V1	-	H58191
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70875	52.1	-	CGKW01	44	4880	4526	4/21/15	2/28/17	Contig	SC	SAMEA2056713	GCA_001359935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/935/GCA_001359935.1_10060_6_69	-	60434
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41541	65.6	-	MMEV01	13	4299	4122	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918947	GCA_001839965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/965/GCA_001839965.1_ASM183996v1	-	I0001033-5
Escherichia coli KTE150	1169392	PRJNA157703	157703	Proteobacteria	Gammaproteobacteria	4.89222	50.4	-	ANYF01	55	5042	4783	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847710	GCA_000326725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/725/GCA_000326725.1_Esch_coli_KTE150_V1	-	KTE150
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.16854	39.7	-	CHVN01	93	2401	2173	4/21/15	3/11/17	Contig	SC	SAMEA1025853	GCA_001343635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/635/GCA_001343635.1_6983_3_62	-	SMRU2270
Klebsiella pneumoniae	573	PRJNA375974	375974	Proteobacteria	Gammaproteobacteria	6.11386	56.7	-	MZXR01	67	6314	5880	8/1/17	8/21/17	Scaffold	INDIAN INSTITUTE OF SCIENCE	SAMN06349016	GCA_002238125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/125/GCA_002238125.1_ASM223812v1	-	OK8
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.62121	66.2	-	JTQK01	115	6418	6105	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105655	GCA_000791705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/705/GCA_000791705.1_AZPAE14957	25367914	AZPAE14957
Acinetobacter baumannii	470	PRJNA339662	339662	Proteobacteria	Gammaproteobacteria	4.12508	38.8	-	MDWM01	171	3944	3783	9/7/16	3/21/17	Scaffold	Zhejiang University	SAMN05601618	GCA_001721375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/375/GCA_001721375.1_ASM172137v1	-	XH198
Acinetobacter baumannii	470	PRJNA339662	339662	Proteobacteria	Gammaproteobacteria	4.06954	38.7	-	MDWI01	265	3868	3703	9/7/16	3/21/17	Scaffold	Zhejiang University	SAMN05601613	GCA_001721385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/385/GCA_001721385.1_ASM172138v1	-	XH192
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.13039	65.8	-	JTQJ01	132	6939	6670	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105656	GCA_000791725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/725/GCA_000791725.1_AZPAE14958	25367914	AZPAE14958
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.82522	56.4	-	NOKM01	114	5941	5629	8/15/17	8/17/17	Scaffold	"West China Hospital, Sichuan University"	SAMN07371089	GCA_002252415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/415/GCA_002252415.1_ASM225241v1	-	SCKP-LL83
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09103	39.7	-	CFGA01	62	2321	2102	3/15/15	3/11/17	Contig	SC	SAMEA1025856	GCA_001343655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/655/GCA_001343655.1_6925_5_14	-	SMRU2174
Escherichia coli KTE157	1169394	PRJNA157707	157707	Proteobacteria	Gammaproteobacteria	5.06387	50.6	-	ANYH01	127	5341	4964	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847712	GCA_000326745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/745/GCA_000326745.1_Esch_coli_KTE157_V1	-	KTE157
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40839	65.6	-	MMEX01	39	4305	4113	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918945	GCA_001840005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/005/GCA_001840005.1_ASM184000v1	-	I0000671-3
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.79064	52	-	CGLB01	51	4965	4578	4/21/15	2/28/17	Contig	SC	SAMEA2056714	GCA_001359955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/955/GCA_001359955.1_10060_6_72	-	129-0289-M
Staphylococcus aureus H58183	1412655	PRJNA225071	225071	Terrabacteria group	Firmicutes	2.89946	32.7	-	JEDZ01	9	3055	2896	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385395	GCA_000571355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/355/GCA_000571355.1_Stap_aure_H58183_V1	-	H58183
Staphylococcus aureus H58165	1412653	PRJNA225069	225069	Terrabacteria group	Firmicutes	2.89706	32.7	-	JEEA01	9	3053	2888	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385393	GCA_000571375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/375/GCA_000571375.1_Stap_aure_H58165_V1	-	H58165
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7104	52.1	-	CGIM01	45	4892	4519	4/21/15	2/28/17	Contig	SC	SAMEA2056808	GCA_001360015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/015/GCA_001360015.1_10060_5_34	-	A244
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40288	65.6	-	MMEZ01	9	4282	4113	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918943	GCA_001840055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/055/GCA_001840055.1_ASM184005v1	-	C0000085-2
Escherichia coli KTE166	1169397	PRJNA157713	157713	Proteobacteria	Gammaproteobacteria	4.86777	50.7	-	ANYK01	92	5070	4703	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847715	GCA_000326765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/765/GCA_000326765.1_Esch_coli_KTE166_V1	-	KTE166
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.14804	39.7	-	CGYW01	71	2316	2028	4/21/15	3/11/17	Contig	SC	SAMEA1025881	GCA_001343875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/875/GCA_001343875.1_6925_5_11	-	SMRU2171
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.54136	57.3	-	NBXX01	121	5672	5407	8/18/17	8/21/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06671967	GCA_002257765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/765/GCA_002257765.1_ASM225776v1	-	WCHKP2080
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.74368	66.2	-	JTQI01	90	6460	6279	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105657	GCA_000791735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/735/GCA_000791735.1_AZPAE14959	25367914	AZPAE14959
Acinetobacter baumannii	470	PRJNA339662	339662	Proteobacteria	Gammaproteobacteria	4.00669	38.8	-	MDWJ01	110	3836	3681	9/7/16	3/21/17	Scaffold	Zhejiang University	SAMN05601614	GCA_001721425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/425/GCA_001721425.1_ASM172142v1	-	XH182
Acinetobacter baumannii	470	PRJNA339662	339662	Proteobacteria	Gammaproteobacteria	3.99396	38.8	-	MDWH01	91	3845	3680	9/7/16	3/21/17	Scaffold	Zhejiang University	SAMN05601612	GCA_001721445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/445/GCA_001721445.1_ASM172144v1	-	XH181
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.37067	66.5	-	JTQH01	81	6006	5828	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105658	GCA_000791765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/765/GCA_000791765.1_AZPAE14960	25367914	AZPAE14960
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.50241	57.2	-	NBXW01	57	5594	5335	8/18/17	8/21/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06671968	GCA_002257775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/775/GCA_002257775.1_ASM225777v1	-	WCHKP7J8
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1004	39.8	-	CGYO01	66	2327	2100	4/21/15	3/5/17	Contig	SC	SAMEA1025890	GCA_001343915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/915/GCA_001343915.1_6840_1_19	-	SMRU1771
Escherichia coli KTE177	1169402	PRJNA157723	157723	Proteobacteria	Gammaproteobacteria	5.06355	50.6	-	ANYP01	114	5294	4966	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847720	GCA_000326785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/785/GCA_000326785.1_Esch_coli_KTE177_V1	-	KTE177
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38497	65.6	-	MMFD01	11	4265	4095	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918939	GCA_001840125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/125/GCA_001840125.1_ASM184012v1	-	I0000693-7
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73977	52	-	CEXA01	50	4891	4539	3/12/15	2/28/17	Contig	SC	SAMEA2056809	GCA_001360035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/035/GCA_001360035.1_10060_5_37	-	A247
Staphylococcus aureus H47671	1412651	PRJNA225067	225067	Terrabacteria group	Firmicutes	2.88402	32.8	-	JEEB01	14	3040	2880	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385391	GCA_000571395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/395/GCA_000571395.1_Stap_aure_H47671_V1	-	H47671
Staphylococcus aureus F88405	1412650	PRJNA225066	225066	Terrabacteria group	Firmicutes	2.90642	32.7	-	JEEC01	86	3074	2904	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385390	GCA_000571415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/415/GCA_000571415.1_Stap_aure_F88405_V1	-	F88405
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69916	52.1	-	CEXY01	40	4865	4513	3/10/15	2/28/17	Contig	SC	SAMEA2056846	GCA_001360115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/115/GCA_001360115.1_10060_6_84	-	62717
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39246	65.6	-	MMFF01	9	4275	4107	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918937	GCA_001840145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/145/GCA_001840145.1_ASM184014v1	-	I0000610-1
Escherichia coli KTE180	1169404	PRJNA157727	157727	Proteobacteria	Gammaproteobacteria	5.12548	50.6	-	ANYR01	112	5371	5032	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847722	GCA_000326805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/805/GCA_000326805.1_Esch_coli_KTE180_V1	-	KTE180
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.07395	39.7	-	CGYT01	72	2293	2083	4/21/15	3/5/17	Contig	SC	SAMEA1025914	GCA_001343955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/955/GCA_001343955.1_6925_3_11	-	SMRU2123
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.41422	57.3	-	NBXV01	85	5477	5190	8/18/17	8/21/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06671969	GCA_002257785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/785/GCA_002257785.1_ASM225778v1	-	WCHKP85522
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.4413	66.4	-	JTQG01	81	6152	5978	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105659	GCA_000791785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/785/GCA_000791785.1_AZPAE14961	25367914	AZPAE14961
Acinetobacter baumannii	470	PRJNA339662	339662	Proteobacteria	Gammaproteobacteria	4.02338	38.7	-	MDWG01	144	3834	3676	9/7/16	3/20/17	Scaffold	Zhejiang University	SAMN05601611	GCA_001721455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/455/GCA_001721455.1_ASM172145v1	-	XH191
Acinetobacter baumannii	470	PRJNA339662	339662	Proteobacteria	Gammaproteobacteria	4.03628	38.7	-	MDWK01	187	3842	3679	9/7/16	3/21/17	Scaffold	Zhejiang University	SAMN05601615	GCA_001721465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/465/GCA_001721465.1_ASM172146v1	-	XH183
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.96311	65.9	-	JTQF01	105	6746	6519	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105660	GCA_000791805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/805/GCA_000791805.1_AZPAE14962	25367914	AZPAE14962
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.44146	57.4	-	NBYA01	133	5595	5327	8/18/17	8/21/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06671964	GCA_002257845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/845/GCA_002257845.1_ASM225784v1	-	WCHKP1608
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.17168	39.5	-	CGYG01	68	2422	2179	4/21/15	3/5/17	Contig	SC	SAMEA1025918	GCA_001343975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/975/GCA_001343975.1_6823_4_13	-	SMRU1933
Escherichia coli KTE232	1169365	PRJNA157649	157649	Proteobacteria	Gammaproteobacteria	4.75507	50.9	-	ANYS01	89	4912	4594	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847683	GCA_000326825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/825/GCA_000326825.1_Esch_coli_KTE232_V1	-	KTE232
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38389	65.6	-	MMFE01	5	4251	4092	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918938	GCA_001840155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/155/GCA_001840155.1_ASM184015v1	-	I0000507-9
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71851	52	-	CGJF01	50	4871	4524	4/21/15	2/28/17	Contig	SC	SAMEA2056943	GCA_001360155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/155/GCA_001360155.1_10060_5_64	-	108910
Staphylococcus aureus F88387	1412649	PRJNA225065	225065	Terrabacteria group	Firmicutes	2.93475	32.7	-	JEED01	16	3097	2919	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385389	GCA_000571435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/435/GCA_000571435.1_Stap_aure_F88387_V1	-	F88387
Staphylococcus aureus F88375	1412648	PRJNA225064	225064	Terrabacteria group	Firmicutes	2.85712	32.7	-	JEEE01	30	2987	2854	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385388	GCA_000571455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/455/GCA_000571455.1_Stap_aure_F88375_V1	-	F88375
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69471	52.1	-	CGKV01	44	4866	4505	4/21/15	2/28/17	Contig	SC	SAMEA2057117	GCA_001360315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/315/GCA_001360315.1_10071_3_71	-	634660
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40814	65.6	-	MMFG01	8	4281	4117	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918936	GCA_001840165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/165/GCA_001840165.1_ASM184016v1	-	I0000374-4
Escherichia coli KTE95	1169369	PRJNA157657	157657	Proteobacteria	Gammaproteobacteria	4.96698	50.6	-	ANYY01	108	5197	4885	12/19/12	5/18/17	Contig	Broad Institute	SAMN00847687	GCA_000326845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/326/845/GCA_000326845.1_Esch_coli_KTE95_V1	-	KTE95
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.21529	39.8	-	CIKI01	79	2444	2229	4/21/15	3/5/17	Contig	SC	SAMEA1026007	GCA_001344315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/315/GCA_001344315.1_6983_3_55	-	SMRU2263
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.5446	57.2	-	NBYD01	110	5580	5305	8/18/17	8/21/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06671961	GCA_002257855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/855/GCA_002257855.1_ASM225785v1	-	WCHKP9G2
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.38043	66.5	-	JTQE01	50	6056	5889	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105661	GCA_000791825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/825/GCA_000791825.1_AZPAE14963	25367914	AZPAE14963
Acinetobacter baumannii	470	PRJNA339662	339662	Proteobacteria	Gammaproteobacteria	4.00252	38.8	-	MDWL01	100	3841	3673	9/7/16	3/21/17	Scaffold	Zhejiang University	SAMN05601617	GCA_001721475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/475/GCA_001721475.1_ASM172147v1	-	XH184
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.71567	38.8	-	LYHZ01	86	3594	3468	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745477	GCA_001861375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/375/GCA_001861375.1_ASM186137v1	-	XH726
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.56769	66.2	-	JTQB01	140	6299	6061	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105664	GCA_000791885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/885/GCA_000791885.1_AZPAE14967	25367914	AZPAE14967
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.52821	57.2	-	NBYG01	97	5613	5356	8/18/17	8/21/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06671958	GCA_002257875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/875/GCA_002257875.1_ASM225787v1	-	WCHKP14G4
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.32285	39.4	-	CGYF01	94	2561	2298	4/21/15	3/5/17	Contig	SC	SAMEA1026012	GCA_001344355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/355/GCA_001344355.1_6823_4_1	-	SMRU1921
Escherichia coli O10:K5(L):H4 str. ATCC 23506	1246623	PRJEB1137	183740	Proteobacteria	Gammaproteobacteria	5.09596	50.6	-	CAPK01	224	5311	4942	1/10/13	5/18/17	Contig	RPI	SAMEA2271929	GCA_000333175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/175/GCA_000333175.1_ASM33317v1	-	ATCC 23506
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40216	65.6	-	MMFI01	5	4272	4101	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918934	GCA_001840225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/225/GCA_001840225.1_ASM184022v1	-	I0000319-9
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.68354	52.1	-	CGTA01	49	4826	4482	4/21/15	2/28/17	Contig	SC	SAMEA2057236	GCA_001360335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/335/GCA_001360335.1_10071_3_86	-	A128
Staphylococcus aureus F88369	1412647	PRJNA225063	225063	Terrabacteria group	Firmicutes	2.86421	32.8	-	JEEF01	32	3018	2846	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385387	GCA_000571475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/475/GCA_000571475.1_Stap_aure_F88369_V1	-	F88369
Staphylococcus aureus F84763	1412646	PRJNA225062	225062	Terrabacteria group	Firmicutes	2.86233	32.8	-	JEEG01	41	2990	2843	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385386	GCA_000571495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/495/GCA_000571495.1_Stap_aure_F84763_V1	-	F84763
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73775	52	-	CHGJ01	50	4903	4544	4/21/15	2/28/17	Contig	SC	SAMEA2057252	GCA_001360355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/355/GCA_001360355.1_9953_5_41	-	A368
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40552	65.6	-	MMFJ01	25	4289	4111	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918933	GCA_001840235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/235/GCA_001840235.1_ASM184023v1	-	C0000086-0
Escherichia coli O5:K4(L):H4 str. ATCC 23502	1268238	PRJEB1191	183739	Proteobacteria	Gammaproteobacteria	4.67887	50.6	-	CAPL01	160	4909	4543	1/10/13	5/18/17	Contig	RPI	SAMEA2272238	GCA_000333195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/195/GCA_000333195.1_ASM33319v1	-	ATCC 23502
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1114	39.7	-	CGYU01	56	2282	1968	4/21/15	3/6/17	Contig	SC	SAMEA1026015	GCA_001344375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/375/GCA_001344375.1_6871_1_2	-	SMRU1778
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.70481	57	-	NBYH01	216	5860	5541	8/18/17	8/21/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06671957	GCA_002257925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/925/GCA_002257925.1_ASM225792v1	-	WCHKP13F4
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.04252	65.9	-	JTQC01	87	6885	6657	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105663	GCA_000791905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/905/GCA_000791905.1_AZPAE14965	25367914	AZPAE14965
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.00849	38.9	-	LYHY01	106	3901	3758	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745478	GCA_001861385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/385/GCA_001861385.1_ASM186138v1	-	XH727
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.79798	38.8	-	LYHW01	58	3647	3524	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745480	GCA_001861395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/395/GCA_001861395.1_ASM186139v1	-	XH729
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.89722	66	-	JTQA01	123	6593	6365	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105665	GCA_000791915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/915/GCA_000791915.1_AZPAE14968	25367914	AZPAE14968
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.71767	57	-	NBYI01	68	5781	5484	8/18/17	8/21/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06671956	GCA_002257935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/935/GCA_002257935.1_ASM225793v1	-	WCHKP13F2
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.14531	39.6	-	CHVE01	96	2382	2130	4/21/15	3/5/17	Contig	SC	SAMEA1026030	GCA_001344435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/435/GCA_001344435.1_6899_6_4	-	SMRU2068
Escherichia coli Nissle 1917	316435	PRJEB1192	183738	Proteobacteria	Gammaproteobacteria	5.01992	50.5	-	CAPM01	143	5167	4827	1/10/13	5/18/17	Contig	RPI	SAMEA2272139	GCA_000333215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/333/215/GCA_000333215.1_ASM33321v1	-	Nissle 1917
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37802	65.6	-	MMFK01	24	4265	4087	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918932	GCA_001840245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/245/GCA_001840245.1_ASM184024v1	-	I0000489-0
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73405	52	-	CGVN01	77	4908	4549	4/21/15	2/28/17	Contig	SC	SAMEA2057361	GCA_001360375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/375/GCA_001360375.1_9953_5_50	-	A379
Staphylococcus aureus F84732	1412645	PRJNA225061	225061	Terrabacteria group	Firmicutes	2.85613	32.8	-	JEEH01	32	3012	2848	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385385	GCA_000571515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/515/GCA_000571515.1_Stap_aure_F84732_V1	-	F84732
Staphylococcus aureus F81389	1412644	PRJNA225060	225060	Terrabacteria group	Firmicutes	2.84358	32.8	-	JEEI01	52	2947	2792	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385384	GCA_000571535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/535/GCA_000571535.1_Stap_aure_F81389_V1	-	F81389
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73475	52	-	CHGK01	67	4896	4530	4/21/15	2/28/17	Contig	SC	SAMEA2057362	GCA_001360395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/395/GCA_001360395.1_9953_5_53	-	A385
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39979	65.6	-	MMFL01	25	4266	4096	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918931	GCA_001840285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/285/GCA_001840285.1_ASM184028v1	-	I0000389-2
Escherichia coli 99.0815	1005433	PRJNA65679	65679	Proteobacteria	Gammaproteobacteria	5.21128	50.5	-	AODZ01	293	5569	5127	1/31/13	2/24/17	Contig	Institute for Genome Sciences	SAMN01112588	GCA_000334975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/975/GCA_000334975.2_ASM33497v2	-	99.0815
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08071	39.6	-	CGYS01	58	2292	2046	4/21/15	3/11/17	Contig	SC	SAMEA1026056	GCA_001344535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/535/GCA_001344535.1_6899_7_7	-	SMRU2095
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.34933	57.4	-	NBXP01	145	5364	5101	8/18/17	8/21/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06671975	GCA_002257965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/965/GCA_002257965.1_ASM225796v1	-	WCHKP10H6
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.83224	66.1	-	JTPZ01	179	6700	6387	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105666	GCA_000791945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/945/GCA_000791945.1_AZPAE14969	25367914	AZPAE14969
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.01883	39	-	LYHX01	127	3906	3751	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745479	GCA_001861435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/435/GCA_001861435.1_ASM186143v1	-	XH728
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.96472	38.9	-	LYHM01	130	3819	3672	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745490	GCA_001861455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/455/GCA_001861455.1_ASM186145v1	-	XH740
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.92046	66.1	-	JTPY01	108	6751	6522	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105667	GCA_000791965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/791/965/GCA_000791965.1_AZPAE14970	25367914	AZPAE14970
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.43338	57.3	-	NBXO01	91	5479	5228	8/18/17	8/21/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06671976	GCA_002257975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/975/GCA_002257975.1_ASM225797v1	-	WCHKP107220
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12647	39.7	-	CICI01	56	2319	2074	4/21/15	3/11/17	Contig	SC	SAMEA1026129	GCA_001344735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/735/GCA_001344735.1_6823_5_7	-	SMRU1951
Escherichia coli 99.0816	1005430	PRJNA65657	65657	Proteobacteria	Gammaproteobacteria	5.19496	50.3	-	AOEA01	225	5553	5096	1/31/13	2/24/17	Contig	Institute for Genome Sciences	SAMN01112507	GCA_000334995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/334/995/GCA_000334995.2_ASM33499v2	-	99.0816
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39238	65.6	-	MMFM01	11	4271	4099	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918930	GCA_001840305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/305/GCA_001840305.1_ASM184030v1	-	I0000517-8
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74413	52.1	-	CHNA01	46	4932	4573	4/21/15	2/28/17	Contig	SC	SAMEA2057369	GCA_001360415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/415/GCA_001360415.1_9953_5_74	-	LNT1426
Staphylococcus aureus F81381	1412643	PRJNA225059	225059	Terrabacteria group	Firmicutes	2.90243	32.7	-	JEEJ01	13	3063	2896	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385383	GCA_000571555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/555/GCA_000571555.1_Stap_aure_F81381_V1	-	F81381
Staphylococcus aureus F77974	1412642	PRJNA225058	225058	Terrabacteria group	Firmicutes	2.86459	32.8	-	JEEK01	25	2995	2851	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385382	GCA_000571575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/575/GCA_000571575.1_Stap_aure_F77974_V1	-	F77974
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69911	52.1	-	CHGI01	41	4853	4511	4/21/15	2/28/17	Contig	SC	SAMEA2057370	GCA_001360435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/435/GCA_001360435.1_9953_5_77	-	LNT1516
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38719	65.6	-	MMFN01	28	4265	4085	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918929	GCA_001840315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/315/GCA_001840315.1_ASM184031v1	-	I0000285-2
Escherichia coli 99.1793	1005437	PRJNA65687	65687	Proteobacteria	Gammaproteobacteria	5.28409	50.3	-	AOEF01	182	5692	5231	1/31/13	2/24/17	Contig	Institute for Genome Sciences	SAMN01112509	GCA_000335015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/015/GCA_000335015.2_ASM33501v2	-	99.1793
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.20286	39.4	-	CFDH01	96	2439	2192	3/15/15	3/11/17	Contig	SC	SAMEA1026165	GCA_001344795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/795/GCA_001344795.1_6899_6_10	-	SMRU2074
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.34331	57.4	-	NBXQ01	137	5358	5099	8/18/17	8/21/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06671974	GCA_002258005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/005/GCA_002258005.1_ASM225800v1	-	WCHKP10G4
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.2039	66.5	-	JTPX01	185	5923	5657	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105668	GCA_000792005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/005/GCA_000792005.1_AZPAE14971	25367914	AZPAE14971
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.92924	38.8	-	LYHK01	68	3795	3663	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745492	GCA_001861465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/465/GCA_001861465.1_ASM186146v1	-	XH742
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.94386	38.8	-	LYHP01	81	3811	3672	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745487	GCA_001861475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/475/GCA_001861475.1_ASM186147v1	-	XH737
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.18356	65.8	-	JTPV01	141	7025	6760	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105670	GCA_000792065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/065/GCA_000792065.1_AZPAE14973	25367914	AZPAE14973
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.42388	57.3	-	NBXR01	124	5561	5304	8/18/17	8/21/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06671973	GCA_002258015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/015/GCA_002258015.1_ASM225801v1	-	WCHKP8F5
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08169	39.7	-	CHUQ01	76	2321	2082	4/21/15	3/11/17	Contig	SC	SAMEA1026177	GCA_001344855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/855/GCA_001344855.1_6805_7_6	-	SMRU1734
Escherichia coli 99.1805	1005436	PRJNA65685	65685	Proteobacteria	Gammaproteobacteria	5.17542	50.6	-	AOEG01	305	5556	5085	1/31/13	2/24/17	Contig	Institute for Genome Sciences	SAMN01112699	GCA_000335035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/035/GCA_000335035.2_ASM33503v2	-	99.1805
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40373	65.6	-	MMFO01	20	4292	4117	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918928	GCA_001840325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/325/GCA_001840325.1_ASM184032v1	-	I0000250-6
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73789	52.1	-	CGKS01	52	4919	4570	4/21/15	2/28/17	Contig	SC	SAMEA2057377	GCA_001360455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/455/GCA_001360455.1_10060_6_8	-	SV171
Staphylococcus aureus F77967	1412641	PRJNA225057	225057	Terrabacteria group	Firmicutes	2.77673	32.7	-	JEEL01	35	2884	2750	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385381	GCA_000571595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/595/GCA_000571595.1_Stap_aure_F77967_V1	-	F77967
Staphylococcus aureus F77960	1412640	PRJNA225056	225056	Terrabacteria group	Firmicutes	2.87836	32.8	-	JEEM01	47	3008	2855	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385380	GCA_000571615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/615/GCA_000571615.1_Stap_aure_F77960_V1	-	F77960
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93295	51.8	-	CGVJ01	62	5133	4753	4/21/15	2/28/17	Contig	SC	SAMEA2058228	GCA_001360475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/475/GCA_001360475.1_9870_8_7	-	2003-016955
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38705	65.6	-	MMFP01	9	4271	4110	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918927	GCA_001840365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/365/GCA_001840365.1_ASM184036v1	-	I0000057-5
Escherichia coli ATCC 700728	1051353	PRJNA68603	68603	Proteobacteria	Gammaproteobacteria	5.11062	50.3	-	AOEH01	131	5404	4997	1/31/13	2/24/17	Contig	Institute for Genome Sciences	SAMN01112700	GCA_000335055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/055/GCA_000335055.2_ASM33505v2	-	ATCC 700728
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.03865	39.7	-	CHHV01	72	2243	2036	4/21/15	3/11/17	Contig	SC	SAMEA1026183	GCA_001344895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/895/GCA_001344895.1_6899_7_17	-	SMRU2105
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.75448	57	-	NBXS01	187	5929	5598	8/18/17	8/21/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06671972	GCA_002258045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/045/GCA_002258045.1_ASM225804v1	-	WCHKP8D7
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.08593	65.8	-	JTPU01	190	6844	6537	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105671	GCA_000792085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/085/GCA_000792085.1_AZPAE14974	25367914	AZPAE14974
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.69007	38.8	-	LYHJ01	176	3534	3407	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745493	GCA_001861515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/515/GCA_001861515.1_ASM186151v1	-	XH743
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.94333	38.8	-	LYHI01	85	3815	3671	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745494	GCA_001861535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/535/GCA_001861535.1_ASM186153v1	-	XH744
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.36975	66.5	-	JTPT01	143	6089	5831	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105672	GCA_000792095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/095/GCA_000792095.1_AZPAE14975	25367914	AZPAE14975
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.75526	57	-	NBXT01	188	5931	5607	8/18/17	8/21/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06671971	GCA_002258055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/055/GCA_002258055.1_ASM225805v1	-	WCHKP7E2
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.33215	39.6	-	CHUS01	65	2585	2345	4/21/15	3/11/17	Contig	SC	SAMEA1026194	GCA_001344915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/915/GCA_001344915.1_6823_3_6	-	SMRU1902
Escherichia coli PA47	1005512	PRJNA65893	65893	Proteobacteria	Gammaproteobacteria	5.21857	50.3	-	AOEM01	157	5557	5134	1/31/13	2/24/17	Contig	Institute for Genome Sciences	SAMN01112702	GCA_000335075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/075/GCA_000335075.2_ASM33507v2	-	PA47
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41162	65.6	-	MMFR01	25	4305	4134	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918925	GCA_001840395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/395/GCA_001840395.1_ASM184039v1	-	I0000056-7
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81968	51.9	-	CGVL01	45	5003	4642	4/21/15	2/28/17	Contig	SC	SAMEA2058229	GCA_001360495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/495/GCA_001360495.1_9870_8_10	-	2008-006300
Staphylococcus aureus F77919	1412638	PRJNA225054	225054	Terrabacteria group	Firmicutes	2.85478	32.7	-	JEEN01	32	2958	2813	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385378	GCA_000571635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/635/GCA_000571635.1_Stap_aure_F77919_V1	-	F77919
Staphylococcus aureus F77917	1412637	PRJNA225053	225053	Terrabacteria group	Firmicutes	2.75415	32.7	-	JEEO01	53	2852	2662	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385377	GCA_000571655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/655/GCA_000571655.1_Stap_aure_F77917_V1	-	F77917
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72356	52	-	CHMS01	61	4880	4522	4/21/15	2/28/17	Contig	SC	SAMEA2058233	GCA_001360535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/535/GCA_001360535.1_9870_8_22	-	2010-011361
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39311	65.6	-	MMFS01	26	4290	4118	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918924	GCA_001840405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/405/GCA_001840405.1_ASM184040v1	-	I0000031-0
Escherichia coli PA48	1005513	PRJNA65895	65895	Proteobacteria	Gammaproteobacteria	5.19658	50.2	-	AOEN01	136	5507	5030	1/31/13	2/24/17	Contig	Institute for Genome Sciences	SAMN01112511	GCA_000335095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/095/GCA_000335095.2_ASM33509v2	-	PA48
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.06365	39.5	-	CGYE01	52	2269	2046	4/21/15	3/11/17	Contig	SC	SAMEA1026202	GCA_001344975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/975/GCA_001344975.1_6805_7_21	-	SMRU1750
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.57031	57.1	-	NBXU01	123	5606	5325	8/18/17	8/21/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06671970	GCA_002258085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/085/GCA_002258085.1_ASM225808v1	-	WCHKP26
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.63162	66.1	-	JTPS01	104	6324	6099	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105673	GCA_000792115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/115/GCA_000792115.1_AZPAE14976	25367914	AZPAE14976
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.00805	39.1	-	LYHF01	99	3853	3719	11/2/16	4/10/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745497	GCA_001861545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/545/GCA_001861545.1_ASM186154v1	-	XH747
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.92072	39	-	LYHD01	133	3787	3644	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745499	GCA_001861565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/565/GCA_001861565.1_ASM186156v1	-	XH749
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.33614	66.4	-	JTPR01	109	6028	5817	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105674	GCA_000792155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/155/GCA_000792155.1_AZPAE14977	25367914	AZPAE14977
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.42666	57.4	-	NBYB01	141	5586	5307	8/18/17	8/21/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06671963	GCA_002258115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/115/GCA_002258115.1_ASM225811v1	-	WCHKP1548
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08533	39.7	-	CFGD01	72	2284	2026	3/15/15	3/14/17	Contig	SC	SAMEA1026203	GCA_001344995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/995/GCA_001344995.1_6823_7_14	-	SMRU2006
Escherichia coli 7.1982	1051348	PRJNA68593	68593	Proteobacteria	Gammaproteobacteria	5.22551	50.3	-	AOEP01	141	5566	5118	1/31/13	2/22/17	Contig	Institute for Genome Sciences	SAMN01728946	GCA_000335115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/115/GCA_000335115.1_ASM33511v1	-	7.1982
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39193	65.6	-	MMFU01	12	4262	4096	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918922	GCA_001840465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/465/GCA_001840465.1_ASM184046v1	-	I0000013-8
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93457	51.8	-	CEZN01	75	5135	4751	3/13/15	2/28/17	Contig	SC	SAMEA2058425	GCA_001360575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/575/GCA_001360575.1_9870_8_49	-	01-2011-000113
Staphylococcus aureus F29997	1412636	PRJNA225052	225052	Terrabacteria group	Firmicutes	2.81048	32.7	-	JEEP01	30	2921	2789	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385376	GCA_000571675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/675/GCA_000571675.1_Stap_aure_F29997_V1	-	F29997
Staphylococcus aureus F29993	1412635	PRJNA225051	225051	Terrabacteria group	Firmicutes	2.86139	32.8	-	JEEQ01	82	3035	2854	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385375	GCA_000571695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/695/GCA_000571695.1_Stap_aure_F29993_V1	-	F29993
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9472	51.8	-	CHML01	61	5134	4758	4/21/15	2/28/17	Contig	SC	SAMEA2058430	GCA_001360635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/635/GCA_001360635.1_9870_8_67	-	BC2011-1534
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41087	65.6	-	MMFV01	11	4292	4111	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918921	GCA_001840475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/475/GCA_001840475.1_ASM184047v1	-	I0000014-6
Escherichia coli 99.1781	1005439	PRJNA65691	65691	Proteobacteria	Gammaproteobacteria	5.22624	50.2	-	AOEQ01	158	5542	5103	1/31/13	5/18/17	Contig	Institute for Genome Sciences	SAMN01728943	GCA_000335135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/135/GCA_000335135.1_ASM33513v1	-	99.1781
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.09611	39.6	-	CGZV01	81	2327	2089	4/21/15	3/5/17	Contig	SC	SAMEA1028640	GCA_001345455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/455/GCA_001345455.1_7004_5_20	-	SMRU2876
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.41111	57.4	-	NBYE01	112	5562	5303	8/18/17	8/21/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06671960	GCA_002258145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/145/GCA_002258145.1_ASM225814v1	-	WCHKP8F4
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.13048	65.8	-	JTPQ01	132	6939	6670	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105675	GCA_000792165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/165/GCA_000792165.1_AZPAE14978	25367914	AZPAE14978
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.93611	38.8	-	LYGZ01	83	3793	3656	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745503	GCA_001861585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/585/GCA_001861585.1_ASM186158v1	-	XH753
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.83122	38.9	-	LYGV01	96	3721	3582	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745507	GCA_001861615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/615/GCA_001861615.1_ASM186161v1	-	XH757
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.76832	66.2	-	JTPO01	83	6464	6278	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105677	GCA_000792225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/225/GCA_000792225.1_AZPAE14980	25367914	AZPAE14980
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.41261	57.3	-	NBYF01	123	5436	5178	8/18/17	8/21/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06671959	GCA_002258155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/155/GCA_002258155.1_ASM225815v1	-	WCHKP1911
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.1011	39.7	-	CHHZ01	65	2315	2121	4/21/15	3/5/17	Contig	SC	SAMEA1028641	GCA_001345475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/475/GCA_001345475.1_6949_2_21	-	SMRU2445
Escherichia coli 99.1762	1005435	PRJNA65683	65683	Proteobacteria	Gammaproteobacteria	5.26249	50.3	-	AOER01	138	5598	5159	1/31/13	2/24/17	Contig	Institute for Genome Sciences	SAMN01728942	GCA_000335155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/155/GCA_000335155.2_ASM33515v2	-	99.1762
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3981	65.6	-	MMFW01	7	4280	4115	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918920	GCA_001840505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/505/GCA_001840505.1_ASM184050v1	-	I0000021-1
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93364	51.8	-	CHGH01	81	5134	4753	4/21/15	2/28/17	Contig	SC	SAMEA2058432	GCA_001360655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/655/GCA_001360655.1_9870_8_73	-	01-2010-002043
Staphylococcus aureus F29982	1412634	PRJNA225050	225050	Terrabacteria group	Firmicutes	2.7052	32.7	-	JEER01	26	2768	2634	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385374	GCA_000571715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/715/GCA_000571715.1_Stap_aure_F29982_V1	-	F29982
Staphylococcus aureus F26884	1412633	PRJNA225049	225049	Terrabacteria group	Firmicutes	2.85454	32.7	-	JEES01	13	2990	2828	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385373	GCA_000571735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/735/GCA_000571735.1_Stap_aure_F26884_V1	-	F26884
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71025	52.1	-	CEXB01	46	4867	4514	3/11/15	2/28/17	Contig	SC	SAMEA2058621	GCA_001360715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/715/GCA_001360715.1_10060_5_12	-	A150
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39549	65.6	-	MMFX01	26	4274	4097	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918919	GCA_001840515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/515/GCA_001840515.1_ASM184051v1	-	I0000016-1
Escherichia coli PA35	1051352	PRJNA68601	68601	Proteobacteria	Gammaproteobacteria	5.33757	50.1	-	AOES01	150	5706	5272	1/31/13	2/24/17	Contig	Institute for Genome Sciences	SAMN01728948	GCA_000335175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/175/GCA_000335175.2_ASM33517v2	-	PA35
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.19159	39.5	-	CIDD01	97	2403	2174	4/21/15	3/5/17	Contig	SC	SAMEA1028689	GCA_001345515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/515/GCA_001345515.1_7011_5_2	-	SMRU2786
Klebsiella pneumoniae	573	PRJNA353728	353728	Proteobacteria	Gammaproteobacteria	5.67366	56.7	-	NBYJ01	143	5783	5434	8/18/17	8/21/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06671955	GCA_002258175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/258/175/GCA_002258175.1_ASM225817v1	-	WCHKP31
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.27654	66.5	-	JTPN01	91	5949	5770	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105678	GCA_000792245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/245/GCA_000792245.1_AZPAE14981	25367914	AZPAE14981
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.95029	39	-	LYGP01	135	3807	3650	11/2/16	4/10/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745513	GCA_001861655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/655/GCA_001861655.1_ASM186165v1	-	XH767
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.81868	38.9	-	LYGM01	113	3660	3533	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745516	GCA_001861665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/665/GCA_001861665.1_ASM186166v1	-	XH770
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.45569	66.4	-	JTPM01	119	6151	5915	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105679	GCA_000792285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/792/285/GCA_000792285.1_AZPAE14982	25367914	AZPAE14982
Klebsiella pneumoniae	573	PRJDB5883	395170	Proteobacteria	Gammaproteobacteria	5.54653	57.2	-	BDQR01	3	5560	5176	7/19/17	8/23/17	Scaffold	"Hattori Laboratory, Department of Center for Omics and Bioinformatics, Graduate School of Frontier Sciences, The University of Tokyo"	SAMD00083910	GCA_002260905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/905/GCA_002260905.1_ASM226090v1	-	2H7
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.07598	39.7	-	CFCH01	77	2291	2078	3/15/15	3/5/17	Contig	SC	SAMEA1028697	GCA_001345535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/535/GCA_001345535.1_6949_2_18	-	SMRU2442
Escherichia coli 3.4880	1051347	PRJNA68591	68591	Proteobacteria	Gammaproteobacteria	5.35264	50.2	-	AOET01	166	5788	5342	1/31/13	2/24/17	Contig	Institute for Genome Sciences	SAMN01728945	GCA_000335195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/195/GCA_000335195.2_ASM33519v2	-	3.488
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37226	65.6	-	MMFY01	55	4286	4110	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918918	GCA_001840545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/545/GCA_001840545.1_ASM184054v1	-	I0000025-2
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73302	52	-	CGJH01	46	4899	4547	4/21/15	2/28/17	Contig	SC	SAMEA2058622	GCA_001360735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/735/GCA_001360735.1_10060_5_15	-	A155
Staphylococcus aureus F26858	1412631	PRJNA225047	225047	Terrabacteria group	Firmicutes	2.97511	32.7	-	JEET01	17	3158	2994	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385371	GCA_000571755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/755/GCA_000571755.1_Stap_aure_F26858_V1	-	F26858
Staphylococcus aureus F23368	1412630	PRJNA225046	225046	Terrabacteria group	Firmicutes	2.86613	32.8	-	JEEU01	24	3016	2855	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385370	GCA_000571775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/775/GCA_000571775.1_Stap_aure_F23368_V1	-	F23368
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73147	52	-	CGJL01	47	4884	4541	4/21/15	2/28/17	Contig	SC	SAMEA2058623	GCA_001360755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/755/GCA_001360755.1_10060_5_18	-	A160
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39835	65.6	-	MMFZ01	42	4285	4100	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918917	GCA_001840555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/555/GCA_001840555.1_ASM184055v1	-	I0000010-4
Escherichia coli 99.0670	1005423	PRJNA65643	65643	Proteobacteria	Gammaproteobacteria	5.19006	50.2	-	AOEV01	130	5535	5110	1/31/13	2/24/17	Contig	Institute for Genome Sciences	SAMN01728944	GCA_000335215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/215/GCA_000335215.2_ASM33521v2	-	99.067
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.03037	39.6	-	CGZS01	68	2228	1998	4/21/15	3/5/17	Contig	SC	SAMEA1028708	GCA_001345575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/575/GCA_001345575.1_6983_6_37	-	SMRU2341
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.5928	57.3	-	NLFI01	178	5769	5453	8/21/17	8/23/17	Scaffold	Zhejiang University	SAMN07251855	GCA_002261545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/545/GCA_002261545.1_ASM226154v1	-	L96
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.26586	66.4	-	JTRF01	161	5985	5744	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105634	GCA_000793585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/585/GCA_000793585.1_AZPAE14936	25367914	AZPAE14936
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.94342	38.8	-	LYGF01	76	3810	3671	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745523	GCA_001861695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/695/GCA_001861695.1_ASM186169v1	-	XH793
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.01226	38.9	-	LYFZ01	55	3889	3760	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745529	GCA_001861735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/735/GCA_001861735.1_ASM186173v1	-	XH799
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.35108	66.4	-	JTRC01	116	6026	5783	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105637	GCA_000793595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/595/GCA_000793595.1_AZPAE14939	25367914	AZPAE14939
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.26311	57.4	-	NLFE01	116	5300	5054	8/21/17	8/23/17	Scaffold	Zhejiang University	SAMN07251851	GCA_002261615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/615/GCA_002261615.1_ASM226161v1	-	L81
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.16321	39.4	-	CGZR01	77	2404	2166	4/21/15	3/5/17	Contig	SC	SAMEA1028724	GCA_001345635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/635/GCA_001345635.1_6983_7_55	-	SMRU2359
Escherichia coli 99.0814	1005434	PRJNA65681	65681	Proteobacteria	Gammaproteobacteria	5.26108	50.4	-	AODY01	211	5606	5168	1/31/13	2/24/17	Contig	Institute for Genome Sciences	SAMN01112587	GCA_000335235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/235/GCA_000335235.2_ASM33523v2	-	99.0814
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39932	65.6	-	MMGA01	3	4266	4099	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915293	GCA_001840575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/575/GCA_001840575.1_ASM184057v1	-	01-R1632
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73243	52	-	CEXF01	41	4886	4527	3/10/15	3/3/17	Contig	SC	SAMEA2058627	GCA_001360815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/815/GCA_001360815.1_10060_5_33	-	A243
Staphylococcus aureus F23353	1412629	PRJNA225045	225045	Terrabacteria group	Firmicutes	2.87263	32.8	-	JEEV01	70	3008	2848	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385369	GCA_000571795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/795/GCA_000571795.1_Stap_aure_F23353_V1	-	F23353
Staphylococcus aureus F20115	1412626	PRJNA225042	225042	Terrabacteria group	Firmicutes	2.83924	32.8	-	JEEW01	39	2971	2827	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385366	GCA_000571815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/815/GCA_000571815.1_Stap_aure_F20115_V1	-	F20115
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.80327	52	-	CGIO01	47	4980	4623	4/21/15	2/28/17	Contig	SC	SAMEA2058630	GCA_001360835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/835/GCA_001360835.1_10060_5_42	-	A253
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3953	65.6	-	MMGB01	5	4263	4113	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915292	GCA_001840595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/595/GCA_001840595.1_ASM184059v1	-	01-R1138
Escherichia coli 99.0839	1005432	PRJNA65677	65677	Proteobacteria	Gammaproteobacteria	5.18356	50.3	-	AOEB01	181	5521	5095	1/31/13	2/24/17	Contig	Institute for Genome Sciences	SAMN01112697	GCA_000335255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/255/GCA_000335255.2_ASM33525v2	-	99.0839
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10091	39.7	-	CHAB01	58	2338	2116	4/21/15	3/5/17	Contig	SC	SAMEA1028727	GCA_001345655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/655/GCA_001345655.1_7011_5_4	-	SMRU2788
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.44089	57.3	-	NLFB01	123	5512	5251	8/21/17	8/23/17	Scaffold	Zhejiang University	SAMN07251848	GCA_002261655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/655/GCA_002261655.1_ASM226165v1	-	L70
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.34616	66.4	-	JTRH01	59	6033	5869	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105632	GCA_000793905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/793/905/GCA_000793905.1_AZPAE14934	25367914	AZPAE14934
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.87826	39	-	LYFX01	96	3715	3562	11/2/16	4/10/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745531	GCA_001861745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/745/GCA_001861745.1_ASM186174v1	-	XH801
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.04705	39.3	-	LYFM01	358	3853	3711	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745542	GCA_001861775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/775/GCA_001861775.1_ASM186177v1	-	XH829
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.76463	66.2	-	JTRG01	69	6463	6269	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105633	GCA_000794095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/095/GCA_000794095.1_AZPAE14935	25367914	AZPAE14935
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.68447	57.1	-	NLFC01	169	5874	5540	8/21/17	8/23/17	Scaffold	Zhejiang University	SAMN07251849	GCA_002261665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/665/GCA_002261665.1_ASM226166v1	-	L79
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.11232	39.5	-	CHHW01	50	2326	2097	4/21/15	3/5/17	Contig	SC	SAMEA1028773	GCA_001345715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/715/GCA_001345715.1_6925_8_10	-	SMRU2530
Escherichia coli 99.0848	1005431	PRJNA65675	65675	Proteobacteria	Gammaproteobacteria	5.24831	50.3	-	AOEC01	229	5626	5174	1/31/13	2/24/17	Contig	Institute for Genome Sciences	SAMN01112696	GCA_000335275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/275/GCA_000335275.2_ASM33527v2	-	99.0848
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38976	65.6	-	MMGC01	7	4258	4094	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915291	GCA_001840625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/625/GCA_001840625.1_ASM184062v1	-	02-R0403
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73418	52	-	CGIP01	51	4897	4537	4/21/15	2/28/17	Contig	SC	SAMEA2058632	GCA_001360855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/855/GCA_001360855.1_10060_5_48	-	A259
Staphylococcus aureus F16470	1412624	PRJNA225040	225040	Terrabacteria group	Firmicutes	2.80503	32.8	-	JEEX01	41	2935	2791	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385364	GCA_000571835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/835/GCA_000571835.1_Stap_aure_F16470_V1	-	F16470
Staphylococcus aureus F16432	1412623	PRJNA225039	225039	Terrabacteria group	Firmicutes	2.89768	32.7	-	JEEY01	12	3055	2893	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385363	GCA_000571855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/855/GCA_000571855.1_Stap_aure_F16432_V1	-	F16432
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7225	52	-	CGJQ01	52	4895	4539	4/21/15	2/28/17	Contig	SC	SAMEA2058816	GCA_001360935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/935/GCA_001360935.1_10060_5_81	-	B4381
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34934	65.6	-	MMGD01	2	4235	4081	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915290	GCA_001840645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/645/GCA_001840645.1_ASM184064v1	-	01-R1651
Escherichia coli 99.1753	1005440	PRJNA65693	65693	Proteobacteria	Gammaproteobacteria	5.13889	50.5	-	AOED01	253	5459	5003	1/31/13	2/24/17	Contig	Institute for Genome Sciences	SAMN01112508	GCA_000335295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/295/GCA_000335295.2_ASM33529v2	-	99.1753
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.07394	39.5	-	CGZM01	80	2268	2062	4/21/15	3/5/17	Contig	SC	SAMEA1028783	GCA_001345735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/735/GCA_001345735.1_6949_1_7	-	SMRU2407
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.96951	56.8	-	NLFA01	304	6202	5805	8/21/17	8/23/17	Scaffold	Zhejiang University	SAMN07251847	GCA_002261675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/675/GCA_002261675.1_ASM226167v1	-	L69
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.46947	66.4	-	JTZP01	64	6194	5906	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105416	GCA_000795405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/405/GCA_000795405.1_AZPAE13757	25367914	AZPAE13757
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.09219	39.1	-	LYFO01	102	3978	3826	11/2/16	4/10/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745540	GCA_001861785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/785/GCA_001861785.1_ASM186178v1	-	XH823
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.94316	38.9	-	LYFL01	119	3800	3666	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745543	GCA_001861795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/795/GCA_001861795.1_ASM186179v1	-	XH830
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.95846	66.1	-	JTZO01	110	6754	6547	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105417	GCA_000795425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/425/GCA_000795425.1_AZPAE13848	25367914	AZPAE13848
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.55794	57.3	-	NLEW01	188	5718	5415	8/21/17	8/23/17	Scaffold	Zhejiang University	SAMN07251843	GCA_002261775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/775/GCA_002261775.1_ASM226177v1	-	L58
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.07877	39.7	-	CHAC01	65	2284	2083	4/21/15	3/5/17	Contig	SC	SAMEA1028786	GCA_001345755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/755/GCA_001345755.1_7011_6_7	-	SMRU2815
Escherichia coli 99.1775	1005438	PRJNA65689	65689	Proteobacteria	Gammaproteobacteria	5.14651	50.2	-	AOEE01	277	5479	5009	1/31/13	2/24/17	Contig	Institute for Genome Sciences	SAMN01112589	GCA_000335315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/315/GCA_000335315.2_ASM33531v2	-	99.1775
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40143	65.6	-	MMGE01	1	4278	4132	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915289	GCA_001840665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/665/GCA_001840665.1_ASM184066v1	-	02-R0020
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.85064	52	-	CGIS01	47	5061	4685	4/21/15	2/28/17	Contig	SC	SAMEA2058819	GCA_001360955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/955/GCA_001360955.1_10060_5_90	-	1499
Staphylococcus aureus F13027	1412622	PRJNA225038	225038	Terrabacteria group	Firmicutes	2.92602	32.8	-	JEEZ01	52	3053	2901	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385362	GCA_000571875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/875/GCA_000571875.1_Stap_aure_F13027_V1	-	F13027
Staphylococcus aureus F13022	1412621	PRJNA225037	225037	Terrabacteria group	Firmicutes	2.84347	32.8	-	JEFA01	57	2985	2825	2/14/14	3/3/17	Scaffold	Broad Institute	SAMN02385361	GCA_000571895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/571/895/GCA_000571895.1_Stap_aure_F13022_V1	-	F13022
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.815	52	-	CGJY01	47	4987	4601	4/21/15	2/28/17	Contig	SC	SAMEA2058820	GCA_001360975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/975/GCA_001360975.1_10060_5_92	-	1607
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40063	65.6	-	MMGF01	5	4267	4110	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915288	GCA_001840675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/675/GCA_001840675.1_ASM184067v1	-	01-R0877
Escherichia coli PA19	1051351	PRJNA68599	68599	Proteobacteria	Gammaproteobacteria	5.21405	50.2	-	AOEJ01	135	5515	5122	1/31/13	2/24/17	Contig	Institute for Genome Sciences	SAMN01112591	GCA_000335335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/335/GCA_000335335.2_ASM33533v2	-	PA19
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08265	39.5	-	CFDL01	51	2279	2060	3/15/15	3/5/17	Contig	SC	SAMEA1028813	GCA_001345835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/835/GCA_001345835.1_6938_5_16	-	SMRU2656
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.44142	57.3	-	NLEZ01	124	5516	5255	8/21/17	8/23/17	Scaffold	Zhejiang University	SAMN07251846	GCA_002261785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/785/GCA_002261785.1_ASM226178v1	-	L63
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	5.50166	65.8	-	JTZN01	372	5490	5015	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105418	GCA_000795435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/435/GCA_000795435.1_AZPAE13850	25367914	AZPAE13850
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.94157	38.9	-	LYFJ01	96	3800	3666	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745545	GCA_001861835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/835/GCA_001861835.1_ASM186183v1	-	XH834
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.931	38.9	-	LYFG01	91	3791	3655	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745548	GCA_001861855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/855/GCA_001861855.1_ASM186185v1	-	XH837
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.0401	66	-	JTZM01	88	6859	6611	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105419	GCA_000795465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/465/GCA_000795465.1_AZPAE13853	25367914	AZPAE13853
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.7583	57.3	-	NLEC01	136	5831	5549	8/21/17	8/23/17	Scaffold	Zhejiang University	SAMN07251823	GCA_002262175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/175/GCA_002262175.1_ASM226217v1	-	L442
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.19188	39.5	-	CHAD01	108	2418	2188	4/21/15	3/5/17	Contig	SC	SAMEA1028837	GCA_001345975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/975/GCA_001345975.1_7011_4_10	-	SMRU2770
Escherichia coli PA2	1005487	PRJNA65839	65839	Proteobacteria	Gammaproteobacteria	5.24692	50.3	-	AOEL01	109	5554	5125	1/31/13	2/24/17	Contig	Institute for Genome Sciences	SAMN01112701	GCA_000335355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/355/GCA_000335355.2_ASM33535v2	-	PA2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.43372	65.6	-	MMGG01	4	4319	4150	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915287	GCA_001840705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/705/GCA_001840705.1_ASM184070v1	-	01-04726
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69615	52.1	-	CEYQ01	44	4852	4498	3/10/15	2/28/17	Contig	SC	SAMEA2059028	GCA_001361135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/135/GCA_001361135.1_10071_3_43	-	1650362
Staphylococcus aureus HBHO6021	1409726	PRJNA224048	224048	Terrabacteria group	Firmicutes	2.96984	32.7	-	JDWV01	8	3155	2996	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381787	GCA_000572325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/325/GCA_000572325.1_Stap_aure_HBHO6021_V1	-	HBHO6021
Staphylococcus aureus WMCA6126	1409724	PRJNA224046	224046	Terrabacteria group	Firmicutes	2.91061	32.7	-	JDWW01	7	3069	2899	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381785	GCA_000572345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/345/GCA_000572345.1_Stap_aure_WMCA6126_V1	-	WMCA6126
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7168	52.1	-	CIJX01	42	4863	4507	4/21/15	2/28/17	Contig	SC	SAMEA2059367	GCA_001361235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/235/GCA_001361235.1_9953_5_70	-	LNT1367-3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37752	65.6	-	MMGH01	3	4238	4085	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915286	GCA_001840725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/725/GCA_001840725.1_ASM184072v1	-	00-10219
Escherichia coli 95.0083	1051346	PRJNA68589	68589	Proteobacteria	Gammaproteobacteria	5.16468	50.1	-	AOEU01	207	5559	5060	1/31/13	2/24/17	Contig	Institute for Genome Sciences	SAMN01728947	GCA_000335375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/375/GCA_000335375.2_ASM33537v2	-	95.0083
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.15493	39.5	-	CICX01	90	2376	2166	4/21/15	3/5/17	Contig	SC	SAMEA1028840	GCA_001345995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/995/GCA_001345995.1_6983_6_26	-	SMRU2330
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.81816	57.4	-	NLDU01	111	5985	5669	8/22/17	8/24/17	Scaffold	Zhejiang University	SAMN07251815	GCA_002262335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/335/GCA_002262335.1_ASM226233v1	-	L374
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.37366	65.7	-	JTZL01	168	7307	7007	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105420	GCA_000795485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/485/GCA_000795485.1_AZPAE13856	25367914	AZPAE13856
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.05471	39.1	-	LYFE01	121	3934	3790	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745550	GCA_001861865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/865/GCA_001861865.1_ASM186186v1	-	XH780
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.75458	38.8	-	LYFD01	76	3631	3498	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745551	GCA_001861895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/895/GCA_001861895.1_ASM186189v1	-	XH781
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.01782	66	-	JTZK01	92	6838	6594	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105421	GCA_000795505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/505/GCA_000795505.1_AZPAE13858	25367914	AZPAE13858
Klebsiella pneumoniae	573	PRJNA390758	390758	Proteobacteria	Gammaproteobacteria	5.67918	57.1	-	NLCV01	214	5728	5355	8/22/17	8/24/17	Scaffold	Zhejiang University	SAMN07251790	GCA_002262785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/785/GCA_002262785.1_ASM226278v1	-	L111
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.16287	39.5	-	CGZL01	72	2378	2140	4/21/15	3/11/17	Contig	SC	SAMEA1028844	GCA_001346015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/015/GCA_001346015.1_6972_2_18	-	SMRU2562
Escherichia coli PA11	1051349	PRJNA68595	68595	Proteobacteria	Gammaproteobacteria	5.15896	50.3	-	AOEI01	121	5433	5045	1/31/13	2/24/17	Contig	Institute for Genome Sciences	SAMN01112590	GCA_000335415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/415/GCA_000335415.2_ASM33541v2	-	PA11
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39086	65.6	-	MMGJ01	2	4266	4108	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915284	GCA_001840745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/745/GCA_001840745.1_ASM184074v1	-	02-R0196
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.79354	52.1	-	CHMR01	44	4952	4597	4/21/15	2/28/17	Contig	SC	SAMEA2059371	GCA_001361255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/255/GCA_001361255.1_9953_5_82	-	LNT330
Staphylococcus aureus WAMC6055	1409709	PRJNA224031	224031	Terrabacteria group	Firmicutes	2.92129	32.7	-	JDWX01	5	3075	2923	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381770	GCA_000572365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/365/GCA_000572365.1_Stap_aure_WAMC6055_V1	-	WAMC6055
Staphylococcus aureus WMCS6115	1409707	PRJNA224029	224029	Terrabacteria group	Firmicutes	2.95859	32.8	-	JDWY01	5	3143	2974	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381768	GCA_000572385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/385/GCA_000572385.1_Stap_aure_WMCS6115_V1	-	WMCS6115
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72296	52.1	-	CHMP01	44	4873	4512	4/21/15	2/28/17	Contig	SC	SAMEA2059372	GCA_001361275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/275/GCA_001361275.1_9953_5_88	-	LNT662
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39833	65.6	-	MMGI01	10	4278	4114	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915285	GCA_001840755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/755/GCA_001840755.1_ASM184075v1	-	00-15489
Escherichia coli PA13	1051350	PRJNA68597	68597	Proteobacteria	Gammaproteobacteria	5.20415	50.2	-	AOEK01	139	5506	5121	1/31/13	2/24/17	Contig	Institute for Genome Sciences	SAMN01112510	GCA_000335435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/435/GCA_000335435.2_ASM33543v2	-	PA13
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	1.98755	39.6	-	CGZI01	47	2178	1976	4/21/15	3/11/17	Contig	SC	SAMEA1028849	GCA_001346035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/035/GCA_001346035.1_6949_1_6	-	SMRU2406
Klebsiella pneumoniae	573	PRJNA395037	395037	Proteobacteria	Gammaproteobacteria	5.60982	56.9	-	NOJX01	66	5624	5334	8/22/17	8/24/17	Scaffold	Zhejiang Provincial People's Hospital	SAMN07369157	GCA_002264165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/165/GCA_002264165.1_ASM226416v1	-	TRKP1
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.88873	65.9	-	JTZJ01	119	6684	6476	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105422	GCA_000795525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/525/GCA_000795525.1_AZPAE13860	25367914	AZPAE13860
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.93889	38.8	-	LYFB01	87	3811	3673	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745553	GCA_001861905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/905/GCA_001861905.1_ASM186190v1	-	XH822
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.80384	38.9	-	LYFA01	169	3633	3456	11/2/16	4/10/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745554	GCA_001861935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/935/GCA_001861935.1_ASM186193v1	-	XH827
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.90944	66	-	JTZI01	157	6740	6501	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105423	GCA_000795565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/565/GCA_000795565.1_AZPAE13864	25367914	AZPAE13864
Klebsiella pneumoniae	573	PRJNA395306	395306	Proteobacteria	Gammaproteobacteria	5.80128	57	-	NOUZ01	94	5989	5686	8/22/17	8/24/17	Scaffold	Zhejiang Provincial People's Hospital	SAMN07375174	GCA_002265425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/425/GCA_002265425.1_ASM226542v1	-	QJJ29
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10497	39.6	-	CFBI01	71	2331	2110	3/15/15	3/11/17	Contig	SC	SAMEA1028854	GCA_001346075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/075/GCA_001346075.1_6938_5_17	-	SMRU2657
Escherichia coli PA8	1005492	PRJNA65849	65849	Proteobacteria	Gammaproteobacteria	5.26039	50.3	-	AOEO01	122	5598	5164	1/31/13	2/24/17	Contig	Institute for Genome Sciences	SAMN01112512	GCA_000335455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/455/GCA_000335455.2_ASM33545v2	-	PA8
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34856	65.6	-	MMGK01	4	4237	4080	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915283	GCA_001840775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/775/GCA_001840775.1_ASM184077v1	-	01-R1062
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69951	52.1	-	CGIX01	43	4855	4506	4/21/15	2/28/17	Contig	SC	SAMEA2059527	GCA_001361335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/335/GCA_001361335.1_10060_6_10	-	SV200
Staphylococcus aureus WMCS6114	1409706	PRJNA224028	224028	Terrabacteria group	Firmicutes	2.89827	32.8	-	JDWZ01	9	3060	2916	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381767	GCA_000572405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/405/GCA_000572405.1_Stap_aure_WMCS6114_V1	-	WMCS6114
Staphylococcus aureus OCMM6115	1409687	PRJNA224009	224009	Terrabacteria group	Firmicutes	2.892	32.8	-	JDXA01	5	3045	2896	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381748	GCA_000572425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/425/GCA_000572425.1_Stap_aure_OCMM6115_V1	-	OCMM6115
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.76854	52.1	-	CGKD01	44	4935	4570	4/21/15	2/28/17	Contig	SC	SAMEA2059530	GCA_001361375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/375/GCA_001361375.1_10060_6_19	-	UI10006
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38619	65.6	-	MMGL01	3	4258	4094	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915282	GCA_001840805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/805/GCA_001840805.1_ASM184080v1	-	02-R0016
Escherichia coli O08	1227814	PRJNA174049	174049	Proteobacteria	Gammaproteobacteria	5.08472	50.5	-	AOGM01	160	5308	4965	2/12/13	5/18/17	Contig	UNICAMP	SAMN02471328	GCA_000340235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/235/GCA_000340235.1_O8	23516222	O08
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.17527	39.6	-	CFHA01	67	2401	2178	3/15/15	3/11/17	Contig	SC	SAMEA1028947	GCA_001346295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/295/GCA_001346295.1_6949_4_1	-	SMRU2473
Klebsiella pneumoniae	573	PRJNA395306	395306	Proteobacteria	Gammaproteobacteria	5.80949	57	-	NOVA01	98	6000	5692	8/22/17	8/24/17	Scaffold	Zhejiang Provincial People's Hospital	SAMN07375176	GCA_002265525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/525/GCA_002265525.1_ASM226552v1	-	QJJ36
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	7.25833	65.8	-	JTZH01	146	7038	6748	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105424	GCA_000795585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/585/GCA_000795585.1_AZPAE13866	25367914	AZPAE13866
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.76261	38.8	-	LYEZ01	82	3617	3447	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745555	GCA_001861955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/955/GCA_001861955.1_ASM186195v1	-	XH828
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.96283	39	-	LYEY01	95	3831	3690	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745556	GCA_001861975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/975/GCA_001861975.1_ASM186197v1	-	XH839
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.95829	65.9	-	JTZG01	136	6694	6445	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105425	GCA_000795625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/625/GCA_000795625.1_AZPAE13872	25367914	AZPAE13872
Klebsiella pneumoniae	573	PRJNA395306	395306	Proteobacteria	Gammaproteobacteria	5.83153	57	-	NOVC01	99	6026	5732	8/22/17	8/24/17	Scaffold	Zhejiang Provincial People's Hospital	SAMN07375178	GCA_002265565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/565/GCA_002265565.1_ASM226556v1	-	QJJ51
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	1.99871	39.7	-	CGZD01	56	2201	1971	4/21/15	3/11/17	Contig	SC	SAMEA1028961	GCA_001346355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/355/GCA_001346355.1_6938_5_24	-	SMRU2664
Escherichia coli S17	1227813	PRJNA174048	174048	Proteobacteria	Gammaproteobacteria	4.59147	50.8	-	AOGN01	187	4792	4452	2/12/13	5/18/17	Contig	UNICAMP	SAMN02471327	GCA_000340255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/255/GCA_000340255.1_S17	23516222	S17
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35318	65.6	-	MMGM01	7	4243	4080	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915281	GCA_001840825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/825/GCA_001840825.1_ASM184082v1	-	01-R1235
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.92095	51.8	-	CGKK01	65	5111	4734	4/21/15	2/28/17	Contig	SC	SAMEA2059534	GCA_001361415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/415/GCA_001361415.1_10060_6_31	-	UI15075
Staphylococcus aureus OCMM6109	1409685	PRJNA224007	224007	Terrabacteria group	Firmicutes	2.88624	32.9	-	JDXB01	3	3013	2833	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381746	GCA_000572445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/445/GCA_000572445.1_Stap_aure_OCMM6109_V1	-	OCMM6109
Staphylococcus aureus WMCA6086	1409681	PRJNA224003	224003	Terrabacteria group	Firmicutes	2.9126	32.8	-	JDXC01	3	3075	2909	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381742	GCA_000572465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/465/GCA_000572465.1_Stap_aure_WMCA6086_V1	-	WMCA6086
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74209	52.1	-	CGKH01	46	4924	4566	4/21/15	2/28/17	Contig	SC	SAMEA2059536	GCA_001361455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/455/GCA_001361455.1_10060_6_43	-	UI3744
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34945	65.6	-	MMGN01	7	4241	4083	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915280	GCA_001840835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/835/GCA_001840835.1_ASM184083v1	-	01-R1112
Escherichia coli SEPT362	1196033	PRJNA167774	167774	Proteobacteria	Gammaproteobacteria	5.27995	50.6	-	AOGL01	173	5554	5158	2/12/13	5/18/17	Contig	UNICAMP	SAMN02471326	GCA_000340275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/340/275/GCA_000340275.1_SEPT362	23516222	SEPT362
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.14313	39.6	-	CFGY01	99	2389	2158	3/15/15	3/11/17	Contig	SC	SAMEA1028967	GCA_001346375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/375/GCA_001346375.1_6983_7_70	-	SMRU2374
Klebsiella pneumoniae	573	PRJNA395306	395306	Proteobacteria	Gammaproteobacteria	5.83126	56.9	-	NOVB01	100	6029	5728	8/22/17	8/24/17	Scaffold	Zhejiang Provincial People's Hospital	SAMN07375177	GCA_002265605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/605/GCA_002265605.1_ASM226560v1	-	QJJ49
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.79562	65.9	-	JTZF01	153	6651	6371	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105426	GCA_000795635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/635/GCA_000795635.1_AZPAE13876	25367914	AZPAE13876
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.90027	38.8	-	LYIR01	69	3767	3635	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745459	GCA_001861995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/995/GCA_001861995.1_ASM186199v1	-	XH704
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.0317	38.8	-	LYIS01	52	3870	3737	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745458	GCA_001862005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/005/GCA_001862005.1_ASM186200v1	-	XH703
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.78852	66.1	-	JTZE01	75	6453	6292	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105427	GCA_000795665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/665/GCA_000795665.1_AZPAE13877	25367914	AZPAE13877
Klebsiella pneumoniae	573	PRJNA388518	388518	Proteobacteria	Gammaproteobacteria	5.46023	57.1	-	NINZ01	58	5491	5193	8/25/17	8/28/17	Scaffold	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN07178311	GCA_002269805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/805/GCA_002269805.1_ASM226980v1	-	K3113
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10595	39.7	-	CIDE01	65	2264	1977	4/21/15	3/11/17	Contig	SC	SAMEA1028968	GCA_001346395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/395/GCA_001346395.1_7011_4_2	-	SMRU2762
Escherichia coli O104:H4 str. E112/10	1090928	PRJNA73633	73633	Proteobacteria	Gammaproteobacteria	5.33028	50.6	-	AHAV01	218	5706	5286	4/1/13	5/18/17	Contig	Uppsala University	SAMN02472038	GCA_000350005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/005/GCA_000350005.1_E112_10NrN01	23675451	E112/10
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38567	65.6	-	MMGO01	7	4258	4097	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915279	GCA_001840845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/845/GCA_001840845.1_ASM184084v1	-	01-R1130
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93216	51.8	-	CGJZ01	52	5135	4744	4/21/15	2/28/17	Contig	SC	SAMEA2059684	GCA_001361495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/495/GCA_001361495.1_10060_6_55	-	UI5154
Staphylococcus aureus OCMM6103	1409673	PRJNA223995	223995	Terrabacteria group	Firmicutes	2.93689	32.9	-	JDXD01	9	3069	2891	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381734	GCA_000572485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/485/GCA_000572485.1_Stap_aure_OCMM6103_V1	-	OCMM6103
Staphylococcus aureus FVRH6079	1409669	PRJNA223991	223991	Terrabacteria group	Firmicutes	2.93051	32.7	-	JDXE01	6	3082	2924	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381730	GCA_000572505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/505/GCA_000572505.1_Stap_aure_FVRH6079_V1	-	FVRH6079
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74384	52.1	-	CGSV01	42	4926	4575	4/21/15	2/28/17	Contig	SC	SAMEA2059685	GCA_001361515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/515/GCA_001361515.1_10060_6_58	-	UI5446
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37632	65.6	-	MMGP01	6	4257	4093	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915278	GCA_001840885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/885/GCA_001840885.1_ASM184088v1	-	03-R0979
Escherichia coli ONT:H33 str. C48/93	1090930	PRJNA73637	73637	Proteobacteria	Gammaproteobacteria	4.95084	50.6	-	AHAX01	101	5167	4803	4/1/13	2/24/17	Contig	Uppsala University	SAMN02472037	GCA_000350025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/025/GCA_000350025.2_C48_93_IrSpV01	23675451	C48/93
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05526	39.7	-	CGZT01	60	2246	2023	4/21/15	3/11/17	Contig	SC	SAMEA1028986	GCA_001346415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/415/GCA_001346415.1_6983_7_72	-	SMRU2376
Klebsiella pneumoniae	573	PRJNA360179	360179	Proteobacteria	Gammaproteobacteria	5.74969	57.2	-	NSMB01	141	5891	5450	9/10/17	9/18/17	Scaffold	Singapore General Hospital	SAMN06204663	GCA_002288845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/845/GCA_002288845.1_ASM228884v1	-	WBB417
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.94819	65.9	-	JTZD01	132	6738	6530	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105428	GCA_000795685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/685/GCA_000795685.1_AZPAE13879	25367914	AZPAE13879
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.95942	38.9	-	LYIQ01	116	3818	3678	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745460	GCA_001862035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/035/GCA_001862035.1_ASM186203v1	-	XH705
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.69717	38.9	-	LYIN01	86	3563	3431	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745463	GCA_001862055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/055/GCA_001862055.1_ASM186205v1	-	XH708
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.85595	66	-	JTZC01	112	6651	6432	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105429	GCA_000795725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/725/GCA_000795725.1_AZPAE13880	25367914	AZPAE13880
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05953	39.6	-	CGZG01	38	2266	2017	4/21/15	3/11/17	Contig	SC	SAMEA1028993	GCA_001346475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/475/GCA_001346475.1_6938_7_8	-	SMRU2696
Escherichia coli O127:H27 str. C43/90	1090929	PRJNA73635	73635	Proteobacteria	Gammaproteobacteria	5.10107	50.6	-	AHAW01	119	5353	4957	4/1/13	2/24/17	Contig	Uppsala University	SAMN00727765	GCA_000350045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/045/GCA_000350045.2_C43_90_IrSpV01	23675451	C43/90
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40938	65.6	-	MMGQ01	6	4286	4120	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915277	GCA_001840905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/905/GCA_001840905.1_ASM184090v1	-	02-R1680
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69961	52.1	-	CGKJ01	42	4862	4505	4/21/15	2/28/17	Contig	SC	SAMEA2059688	GCA_001361575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/575/GCA_001361575.1_10060_6_67	-	XK1684
Staphylococcus aureus FVRH6066	1409666	PRJNA223988	223988	Terrabacteria group	Firmicutes	2.94882	32.8	-	JDXF01	11	3117	2953	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381727	GCA_000572525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/525/GCA_000572525.1_Stap_aure_FVRH6066_V1	-	FVRH6066
Staphylococcus aureus MISS6176	1409639	PRJNA223961	223961	Terrabacteria group	Firmicutes	2.95487	32.9	-	JDXG01	8	3111	2943	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381700	GCA_000572545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/545/GCA_000572545.1_Stap_aure_MISS6176_V1	-	MISS6176
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.85127	52	-	CGKM01	50	5055	4682	4/21/15	2/28/17	Contig	SC	SAMEA2059694	GCA_001361595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/595/GCA_001361595.1_10060_6_88	-	H104280445
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36366	65.6	-	MMGS01	4	4256	4089	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915275	GCA_001840925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/925/GCA_001840925.1_ASM184092v1	-	01-R1302
Escherichia coli 2875000	1116035	PRJNA77305	77305	Proteobacteria	Gammaproteobacteria	5.05318	50.6	-	AQDB01	123	5423	4979	4/6/13	2/24/17	Contig	IGS	SAMN00829285	GCA_000354275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/275/GCA_000354275.2_ASM35427v2	-	2875000
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.14441	39.7	-	CHVO01	41	2384	2172	4/21/15	3/11/17	Contig	SC	SAMEA1028994	GCA_001346495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/495/GCA_001346495.1_6972_4_4	-	SMRU2596
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.56138	66	-	JTZB01	77	6308	6099	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105430	GCA_000795735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/735/GCA_000795735.1_AZPAE14352	25367914	AZPAE14352
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.09959	39	-	LYIM01	104	4008	3851	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745464	GCA_001862065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/065/GCA_001862065.1_ASM186206v1	-	XH709
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.10923	38.9	-	LYIL01	373	3966	3733	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745465	GCA_001862075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/075/GCA_001862075.1_ASM186207v1	-	XH710
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.83525	66	-	JTZA01	123	6603	6387	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105431	GCA_000795765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/765/GCA_000795765.1_AZPAE14353	25367914	AZPAE14353
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.11323	39.7	-	CFBJ01	56	2260	1982	3/15/15	3/11/17	Contig	SC	SAMEA1029000	GCA_001346515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/515/GCA_001346515.1_6949_1_24	-	SMRU2424
Escherichia coli BCE002_MS12	1116112	PRJNA77459	77459	Proteobacteria	Gammaproteobacteria	4.94644	50.7	-	AQDA01	97	5202	4858	4/6/13	5/18/17	Contig	IGS	SAMN00829290	GCA_000354295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/295/GCA_000354295.1_ASM35429v1	-	BCE002_MS12
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39048	65.6	-	MMGR01	7	4275	4087	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915276	GCA_001840935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/935/GCA_001840935.1_ASM184093v1	-	02-R0898
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72225	52	-	CEYT01	44	4882	4530	3/10/15	2/28/17	Contig	SC	SAMEA2064153	GCA_001361635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/635/GCA_001361635.1_10071_8_24	-	Gen-0024
Staphylococcus aureus FVRH6040	1409634	PRJNA223956	223956	Terrabacteria group	Firmicutes	2.9085	32.7	-	JDXH01	6	3065	2899	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381695	GCA_000572565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/565/GCA_000572565.1_Stap_aure_FVRH6040_V1	-	FVRH6040
Staphylococcus aureus MISS6131	1409622	PRJNA223942	223942	Terrabacteria group	Firmicutes	2.89911	32.7	-	JDXJ01	4	3058	2895	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381683	GCA_000572585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/585/GCA_000572585.1_Stap_aure_MISS6131_V1	-	MISS6131
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82625	52	-	CFAL01	43	5003	4651	3/10/15	2/28/17	Contig	SC	SAMEA2064159	GCA_001361655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/655/GCA_001361655.1_10071_8_42	-	Gen-0042
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39372	65.6	-	MMGT01	5	4261	4098	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915274	GCA_001840945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/945/GCA_001840945.1_ASM184094v1	-	01-R1305
Escherichia coli BCE019_MS-13	1116115	PRJNA77467	77467	Proteobacteria	Gammaproteobacteria	5.05773	50.5	-	AQCZ01	197	5586	4917	4/6/13	2/24/17	Contig	IGS	SAMN00829294	GCA_000354315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/315/GCA_000354315.2_ASM35431v2	-	BCE019_MS-13
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.03282	39.7	-	CIIF01	67	2221	2021	4/21/15	3/11/17	Contig	SC	SAMEA1029004	GCA_001346535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/535/GCA_001346535.1_7011_3_24	-	SMRU2760
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.64262	66.3	-	JTYZ01	72	6393	6211	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105432	GCA_000795785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/785/GCA_000795785.1_AZPAE14359	25367914	AZPAE14359
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.99534	38.8	-	LYIK01	85	3908	3771	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745466	GCA_001862105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/105/GCA_001862105.1_ASM186210v1	-	XH713
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.90343	38.9	-	LYIJ01	92	3796	3655	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745467	GCA_001862135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/135/GCA_001862135.1_ASM186213v1	-	XH714
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.79429	66.1	-	JTYY01	84	6574	6375	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105433	GCA_000795845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/845/GCA_000795845.1_AZPAE14372	25367914	AZPAE14372
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05916	39.7	-	CHID01	74	2272	2066	4/21/15	3/11/17	Contig	SC	SAMEA1029007	GCA_001346555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/555/GCA_001346555.1_7011_4_1	-	SMRU2761
Escherichia coli BCE034_MS-14	1116118	PRJNA77473	77473	Proteobacteria	Gammaproteobacteria	5.29181	50.4	-	AQCY01	160	5721	5203	4/6/13	2/24/17	Contig	IGS	SAMN00829295	GCA_000354335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/335/GCA_000354335.2_ASM35433v2	-	BCE034_MS-14
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37202	65.6	-	MMGU01	5	4245	4074	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915273	GCA_001840985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/985/GCA_001840985.1_ASM184098v1	-	02-R0459
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9314	51.8	-	CHFW01	59	5133	4747	4/21/15	2/28/17	Contig	SC	SAMEA2064345	GCA_001361675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/675/GCA_001361675.1_10071_8_69	-	2010K-0530
Staphylococcus aureus MISS6132	1409621	PRJNA223941	223941	Terrabacteria group	Firmicutes	2.94224	32.9	-	JDXK01	11	3106	2935	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381682	GCA_000572605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/605/GCA_000572605.1_Stap_aure_MISS6132_V1	-	MISS6132
Staphylococcus aureus KINW6025	1409620	PRJNA223940	223940	Terrabacteria group	Firmicutes	2.9181	32.9	-	JDXL01	6	3071	2910	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381681	GCA_000572625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/625/GCA_000572625.1_Stap_aure_KINW6025_V1	-	KINW6025
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93332	51.8	-	CEXG01	49	5125	4747	3/10/15	2/28/17	Contig	SC	SAMEA2064549	GCA_001361695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/695/GCA_001361695.1_10209_5_46	-	UI247
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39055	65.6	-	MMGV01	14	4264	4090	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915272	GCA_001841005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/005/GCA_001841005.1_ASM184100v1	-	02-R1945
Escherichia coli C-34666	1116002	PRJNA77239	77239	Proteobacteria	Gammaproteobacteria	5.36719	50.4	-	AQCX01	198	5869	5335	4/6/13	2/24/17	Contig	IGS	SAMN00829298	GCA_000354355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/355/GCA_000354355.2_ASM35435v2	-	C-34666
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.21248	39.4	-	CFCF01	112	2466	2205	3/15/15	3/11/17	Contig	SC	SAMEA1029020	GCA_001346595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/595/GCA_001346595.1_6938_6_5	-	SMRU2669
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.33701	66.4	-	JTYX01	51	5972	5799	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105434	GCA_000795875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/875/GCA_000795875.1_AZPAE14373	25367914	AZPAE14373
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.96125	38.8	-	LYII01	109	3834	3676	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745468	GCA_001862145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/145/GCA_001862145.1_ASM186214v1	-	XH715
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.48414	57.2	-	FLAS01	45	5490	5257	7/29/16	2/21/17	Scaffold	SC	SAMEA2273666	GCA_900084055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/055/GCA_900084055.1_11983_8_24	-	k1189
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.50534	57.1	-	FLBR01	49	5460	5221	7/29/16	2/21/17	Scaffold	SC	SAMEA2273682	GCA_900084065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/065/GCA_900084065.1_11983_8_37	-	k1325
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.73004	39	-	LYIG01	75	3572	3444	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745470	GCA_001862175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/175/GCA_001862175.1_ASM186217v1	-	XH718
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.25363	66.5	-	JTYW01	44	5939	5794	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105435	GCA_000795925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/925/GCA_000795925.1_AZPAE14379	25367914	AZPAE14379
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10736	39.6	-	CICU01	85	2358	2138	4/21/15	3/11/17	Contig	SC	SAMEA1029042	GCA_001346655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/655/GCA_001346655.1_6949_3_13	-	SMRU2461
Escherichia coli MP021017.10	1116064	PRJNA77363	77363	Proteobacteria	Gammaproteobacteria	4.94025	50.5	-	AQCW01	171	5343	4775	4/6/13	2/24/17	Contig	IGS	SAMN00829301	GCA_000354375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/375/GCA_000354375.2_ASM35437v2	-	MP021017.10
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40478	65.6	-	MMGX01	10	4265	4115	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915270	GCA_001841015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/015/GCA_001841015.1_ASM184101v1	-	01-R0841
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7184	52.1	-	CGLL01	39	4878	4520	4/21/15	2/28/17	Contig	SC	SAMEA2064551	GCA_001361715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/715/GCA_001361715.1_10209_5_52	-	UI3146
Staphylococcus aureus SJOS6145	1409613	PRJNA223933	223933	Terrabacteria group	Firmicutes	2.88984	32.7	-	JDXM01	10	3044	2880	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381674	GCA_000572645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/645/GCA_000572645.1_Stap_aure_SJOS6145_V1	-	SJOS6145
Staphylococcus aureus SJUD6098	1409575	PRJNA223895	223895	Terrabacteria group	Firmicutes	2.98832	32.9	-	JDXN01	13	3149	2970	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381636	GCA_000572665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/665/GCA_000572665.1_Stap_aure_SJUD6098_V1	-	SJUD6098
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93559	51.8	-	CGLM01	56	5140	4753	4/21/15	2/28/17	Contig	SC	SAMEA2064553	GCA_001361735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/735/GCA_001361735.1_10209_5_61	-	UI473
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.4078	65.6	-	MMGW01	10	4294	4125	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915271	GCA_001841045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/045/GCA_001841045.1_ASM184104v1	-	01-R0909
Escherichia coli MP021017.12	1116111	PRJNA77457	77457	Proteobacteria	Gammaproteobacteria	4.87459	50.7	-	AQCU01	470	5296	4697	4/6/13	5/18/17	Contig	IGS	SAMN00829305	GCA_000354395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/395/GCA_000354395.1_ASM35439v1	-	MP021017.12
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.1098	39.6	-	CHHY01	48	2351	2112	4/21/15	3/11/17	Contig	SC	SAMEA1029054	GCA_001346715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/715/GCA_001346715.1_6949_2_11	-	SMRU2435
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.79191	65.8	-	JTYV01	113	6512	6285	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105436	GCA_000795945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/945/GCA_000795945.1_AZPAE14381	25367914	AZPAE14381
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.95254	38.9	-	LYIH01	93	3824	3678	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745469	GCA_001862185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/185/GCA_001862185.1_ASM186218v1	-	XH717
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.59636	57	-	FLCB01	73	5616	5330	7/29/16	2/21/17	Scaffold	SC	SAMEA2273706	GCA_900084075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/075/GCA_900084075.1_11983_8_57	-	k1557
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.3697	57.4	-	FLAQ01	36	5303	5060	7/29/16	2/21/17	Scaffold	SC	SAMEA2273673	GCA_900084085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/085/GCA_900084085.1_11983_8_29	-	k1297
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.7668	39	-	LYIE01	116	3624	3492	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745472	GCA_001862215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/215/GCA_001862215.1_ASM186221v1	-	XH720
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.884	66	-	JTYU01	100	6629	6431	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105437	GCA_000795985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/795/985/GCA_000795985.1_AZPAE14390	25367914	AZPAE14390
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12212	39.7	-	CHIA01	53	2343	2145	4/21/15	3/11/17	Contig	SC	SAMEA1029076	GCA_001346755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/755/GCA_001346755.1_6972_5_5	-	SMRU2621
Escherichia coli MP021017.11	1116065	PRJNA77365	77365	Proteobacteria	Gammaproteobacteria	4.92447	50.5	-	AQCV01	155	5326	4775	4/6/13	2/24/17	Contig	IGS	SAMN00829303	GCA_000354415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/415/GCA_000354415.2_ASM35441v2	-	MP021017.11
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39298	65.6	-	MMGY01	5	4273	4117	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915269	GCA_001841065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/065/GCA_001841065.1_ASM184106v1	-	02-R0027
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93303	51.8	-	CEYV01	91	5127	4744	3/11/15	2/28/17	Contig	SC	SAMEA2066351	GCA_001361795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/795/GCA_001361795.1_10209_5_2	-	2007-001619
Staphylococcus aureus SJOS6123	1409565	PRJNA223885	223885	Terrabacteria group	Firmicutes	2.89582	32.8	-	JDXO01	11	3040	2873	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381626	GCA_000572685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/685/GCA_000572685.1_Stap_aure_SJOS6123_V1	-	SJOS6123
Staphylococcus aureus HOAG6047	1409551	PRJNA223871	223871	Terrabacteria group	Firmicutes	2.94264	32.9	-	JDXP01	7	3091	2927	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381612	GCA_000572705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/705/GCA_000572705.1_Stap_aure_HOAG6047_V1	-	HOAG6047
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70098	52.1	-	CGLK01	44	4855	4503	4/21/15	2/28/17	Contig	SC	SAMEA2066526	GCA_001361835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/835/GCA_001361835.1_10209_5_32	-	UI1954-2/3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39854	65.6	-	MMGZ01	9	4265	4111	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915268	GCA_001841075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/075/GCA_001841075.1_ASM184107v1	-	01-R0908
Escherichia coli MP021017.2	1116058	PRJNA77351	77351	Proteobacteria	Gammaproteobacteria	4.95192	50.5	-	AQCT01	154	5356	4785	4/6/13	2/24/17	Contig	IGS	SAMN00829307	GCA_000354435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/435/GCA_000354435.2_ASM35443v2	-	MP021017.2
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	1.96717	39.7	-	CFBK01	56	2156	1955	3/15/15	3/11/17	Contig	SC	SAMEA1029078	GCA_001346775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/775/GCA_001346775.1_6938_8_9	-	SMRU2721
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.72304	66.2	-	JTYT01	88	6514	6318	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105438	GCA_000796005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/005/GCA_000796005.1_AZPAE14393	25367914	AZPAE14393
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.97544	38.9	-	LYIF01	72	3834	3705	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745471	GCA_001862225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/225/GCA_001862225.1_ASM186222v1	-	XH719
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.57966	57.1	-	FLAK01	72	5584	5327	7/29/16	2/21/17	Scaffold	SC	SAMEA2273676	GCA_900084095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/095/GCA_900084095.1_11983_8_33	-	k1303
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.36142	57.3	-	FLAP01	84	5393	5155	7/29/16	2/21/17	Scaffold	SC	SAMEA2273649	GCA_900084105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/105/GCA_900084105.1_11983_8_10	-	k1087
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.95727	38.9	-	LYID01	104	3821	3685	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745473	GCA_001862235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/235/GCA_001862235.1_ASM186223v1	-	XH721
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.97778	66	-	JTYS01	131	6784	6564	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105439	GCA_000796045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/045/GCA_000796045.1_AZPAE14394	25367914	AZPAE14394
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10518	39.6	-	CGZX01	72	2328	2098	4/21/15	3/11/17	Contig	SC	SAMEA1029083	GCA_001346795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/795/GCA_001346795.1_7011_3_21	-	SMRU2757
Escherichia coli 2872800	1116034	PRJNA77303	77303	Proteobacteria	Gammaproteobacteria	5.05452	50.6	-	AQDC01	111	5409	4967	4/6/13	5/18/17	Contig	IGS	SAMN00829280	GCA_000354455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/455/GCA_000354455.1_ASM35445v1	-	2872800
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37259	65.6	-	MMHA01	1	4258	4092	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915267	GCA_001841105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/105/GCA_001841105.1_ASM184110v1	-	01-R0240
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82683	52	-	CGTD01	43	5018	4648	4/21/15	2/28/17	Contig	SC	SAMEA2067572	GCA_001361855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/855/GCA_001361855.1_10071_8_2	-	Gen-0002
Staphylococcus aureus HOAG6043	1409550	PRJNA223870	223870	Terrabacteria group	Firmicutes	2.94681	33.2	-	JDXQ01	14	3020	2832	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381611	GCA_000572725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/725/GCA_000572725.1_Stap_aure_HOAG6043_V1	-	HOAG6043
Staphylococcus aureus SMMC6014	1409544	PRJNA223864	223864	Terrabacteria group	Firmicutes	2.94016	32.7	-	JDXR01	6	3122	2960	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381605	GCA_000572745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/745/GCA_000572745.1_Stap_aure_SMMC6014_V1	-	SMMC6014
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7214	52	-	CHLF01	45	4881	4519	4/21/15	2/28/17	Contig	SC	SAMEA2067641	GCA_001361915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/915/GCA_001361915.1_10071_8_56	-	Gen-0056
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36366	65.6	-	MMHB01	2	4254	4084	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915266	GCA_001841115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/115/GCA_001841115.1_ASM184111v1	-	01-R0880
Escherichia coli MP021017.3	1116059	PRJNA77353	77353	Proteobacteria	Gammaproteobacteria	4.9357	50.5	-	AQCS01	138	5348	4801	4/6/13	2/24/17	Contig	IGS	SAMN00829306	GCA_000354475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/475/GCA_000354475.2_ASM35447v2	-	MP021017.3
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10123	39.6	-	CIHS01	47	2306	2068	4/21/15	3/11/17	Contig	SC	SAMEA1029088	GCA_001346855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/855/GCA_001346855.1_6925_7_4	-	SMRU2500
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.32598	66.5	-	JTYR01	71	6032	5858	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105440	GCA_000796065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/065/GCA_000796065.1_AZPAE14395	25367914	AZPAE14395
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.79154	38.9	-	LYIC01	44	3642	3523	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745474	GCA_001862265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/265/GCA_001862265.1_ASM186226v1	-	XH722
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.56992	57.2	-	FLBI01	65	5600	5320	7/29/16	2/21/17	Scaffold	SC	SAMEA2273681	GCA_900084115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/115/GCA_900084115.1_11983_8_36	-	k1323
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.45138	57.3	-	FLBT01	31	5483	5240	7/29/16	2/21/17	Scaffold	SC	SAMEA2273642	GCA_900084125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/125/GCA_900084125.1_11983_8_2	-	k1057
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.89185	39.1	-	LYIB01	96	3710	3582	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745475	GCA_001862295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/295/GCA_001862295.1_ASM186229v1	-	XH723
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.46631	66.3	-	JTYP01	66	6140	5974	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105442	GCA_000796085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/085/GCA_000796085.1_AZPAE14402	25367914	AZPAE14402
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08331	39.5	-	CFDS01	45	2296	2052	3/15/15	3/5/17	Contig	SC	SAMEA1029146	GCA_001347035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/035/GCA_001347035.1_7004_5_8	-	SMRU2864
Escherichia coli MP021017.4	1116060	PRJNA77355	77355	Proteobacteria	Gammaproteobacteria	4.96145	50.5	-	AQCR01	155	5369	4807	4/6/13	2/24/17	Contig	IGS	SAMN00829308	GCA_000354495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/495/GCA_000354495.2_ASM35449v2	-	MP021017.4
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40551	65.6	-	MMHC01	7	4282	4111	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915265	GCA_001841145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/145/GCA_001841145.1_ASM184114v1	-	01-R1354
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.83656	51.9	-	CGTF01	56	5003	4645	4/21/15	2/28/17	Contig	SC	SAMEA2067733	GCA_001361935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/935/GCA_001361935.1_10209_5_3	-	2001-102645
Staphylococcus aureus SCLE6012	1409541	PRJNA223861	223861	Terrabacteria group	Firmicutes	2.8524	32.8	-	JDXS01	5	2963	2808	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381602	GCA_000572765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/765/GCA_000572765.1_Stap_aure_SCLE6012_V1	-	SCLE6012
Staphylococcus aureus OCMM6017	1409540	PRJNA223860	223860	Terrabacteria group	Firmicutes	2.93269	32.8	-	JDXT01	8	3062	2892	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381601	GCA_000572785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/785/GCA_000572785.1_Stap_aure_OCMM6017_V1	-	OCMM6017
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72409	52	-	CGTE01	42	4873	4510	4/21/15	2/28/17	Contig	SC	SAMEA2067738	GCA_001361955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/955/GCA_001361955.1_10209_5_18	-	2007-024758
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38666	65.6	-	MMHD01	1	4255	4096	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915264	GCA_001841165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/165/GCA_001841165.1_ASM184116v1	-	01-R1556
Escherichia coli MP021017.5	1116061	PRJNA77357	77357	Proteobacteria	Gammaproteobacteria	4.93842	50.5	-	AQCQ01	136	5335	4781	4/6/13	2/24/17	Contig	IGS	SAMN00829316	GCA_000354515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/515/GCA_000354515.2_ASM35451v2	-	MP021017.5
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.16264	39.6	-	CFHB01	47	2386	2144	3/15/15	3/15/17	Contig	SC	SAMEA1029147	GCA_001347055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/055/GCA_001347055.1_6949_2_9	-	SMRU2433
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.69379	66.1	-	JTYQ01	87	6462	6267	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105441	GCA_000796095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/095/GCA_000796095.1_AZPAE14398	25367914	AZPAE14398
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.62619	39	-	LYIA01	56	3486	3358	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745476	GCA_001862305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/305/GCA_001862305.1_ASM186230v1	-	XH724
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.95392	57	-	FLBY01	172	6085	5705	7/29/16	2/21/17	Scaffold	SC	SAMEA2273677	GCA_900084135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/135/GCA_900084135.1_11983_8_34	-	k1309
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.35364	57.5	-	FLAT01	33	5377	5124	7/29/16	2/21/17	Scaffold	SC	SAMEA2273709	GCA_900084145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/145/GCA_900084145.1_11983_8_59	-	k1573
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.12846	38.9	-	LYHV01	61	3950	3813	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745481	GCA_001862335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/335/GCA_001862335.1_ASM186233v1	-	XH730
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.90739	66.1	-	JTYO01	92	6668	6501	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105443	GCA_000796125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/125/GCA_000796125.1_AZPAE14403	25367914	AZPAE14403
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.07938	39.6	-	CGZA01	71	2277	2058	4/21/15	3/5/17	Contig	SC	SAMEA1029159	GCA_001347075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/075/GCA_001347075.1_6925_8_3	-	SMRU2523
Escherichia coli MP021017.6	1116062	PRJNA77359	77359	Proteobacteria	Gammaproteobacteria	4.93143	50.5	-	AQCP01	147	5329	4781	4/6/13	2/24/17	Contig	IGS	SAMN00829315	GCA_000354535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/535/GCA_000354535.2_ASM35453v2	-	MP021017.6
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41152	65.6	-	MMHE01	3	4297	4107	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915263	GCA_001841175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/175/GCA_001841175.1_ASM184117v1	-	01-R1559
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74359	52.1	-	CHFV01	45	4924	4573	4/21/15	2/28/17	Contig	SC	SAMEA2067739	GCA_001361975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/975/GCA_001361975.1_10209_5_21	-	LNT 08
Staphylococcus aureus WAMC6049	1409524	PRJNA223844	223844	Terrabacteria group	Firmicutes	2.87627	32.7	-	JDXV01	6	3030	2874	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381585	GCA_000572805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/805/GCA_000572805.1_Stap_aure_WAMC6049_V1	-	WAMC6049
Staphylococcus aureus SMMC6016	1409523	PRJNA223843	223843	Terrabacteria group	Firmicutes	2.93584	32.8	-	JDXW01	6	3102	2945	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381584	GCA_000572825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/825/GCA_000572825.1_Stap_aure_SMMC6016_V1	-	SMMC6016
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.94834	51.8	-	CGTL01	59	5163	4764	4/21/15	2/28/17	Contig	SC	SAMEA2067818	GCA_001361995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/995/GCA_001361995.1_10209_5_27	-	UI1059
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38998	65.6	-	MMHF01	2	4262	4100	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915262	GCA_001841195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/195/GCA_001841195.1_ASM184119v1	-	01-R0824
Escherichia coli MP021017.9	1116063	PRJNA77361	77361	Proteobacteria	Gammaproteobacteria	4.93576	50.5	-	AQCO01	139	5356	4793	4/6/13	2/24/17	Contig	IGS	SAMN00829318	GCA_000354555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/555/GCA_000354555.2_ASM35455v2	-	MP021017.9
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08793	39.5	-	CFEP01	59	2291	2058	3/15/15	3/5/17	Contig	SC	SAMEA1029173	GCA_001347095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/095/GCA_001347095.1_6938_6_24	-	SMRU2688
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.57559	66.3	-	JTYN01	42	6344	6186	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105444	GCA_000796145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/145/GCA_000796145.1_AZPAE14404	25367914	AZPAE14404
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.795	38.8	-	LYHU01	62	3659	3528	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745482	GCA_001862345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/345/GCA_001862345.1_ASM186234v1	-	XH731
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.53224	57.3	-	FLBB01	62	5570	5337	7/29/16	2/21/17	Scaffold	SC	SAMEA2273660	GCA_900084155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/155/GCA_900084155.1_11983_8_19	-	k1209
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.49166	57.2	-	FLAN01	58	5471	5223	7/29/16	2/21/17	Scaffold	SC	SAMEA2273653	GCA_900084165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/165/GCA_900084165.1_11983_8_13	-	k1100
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.8937	38.8	-	LYHT01	75	3762	3627	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745483	GCA_001862375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/375/GCA_001862375.1_ASM186237v1	-	XH732
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.29506	66.5	-	JTYM01	55	5996	5846	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105445	GCA_000796175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/175/GCA_000796175.1_AZPAE14410	25367914	AZPAE14410
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.02077	39.7	-	CFEW01	49	2218	2013	3/15/15	3/5/17	Contig	SC	SAMEA1029216	GCA_001347275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/275/GCA_001347275.1_7054_5_7	-	SMRU3055
Escherichia coli MP021552.11	1116134	PRJNA77505	77505	Proteobacteria	Gammaproteobacteria	5.08244	50.4	-	AQCN01	211	5485	5006	4/6/13	2/24/17	Contig	IGS	SAMN00829322	GCA_000354575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/575/GCA_000354575.2_ASM35457v2	-	MP021552.11
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39365	65.6	-	MMHG01	4	4272	4096	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915261	GCA_001841205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/205/GCA_001841205.1_ASM184120v1	-	01-R1321
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73439	52	-	CEYA01	45	4886	4535	3/10/15	2/28/17	Contig	SC	SAMEA2067823	GCA_001362015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/015/GCA_001362015.1_10209_5_42	-	UI2152
Staphylococcus aureus MISS6037	1409521	PRJNA223841	223841	Terrabacteria group	Firmicutes	2.94324	32.9	-	JDXX01	8	3076	2903	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381582	GCA_000572845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/845/GCA_000572845.1_Stap_aure_MISS6037_V1	-	MISS6037
Staphylococcus aureus LPIH6008	1409519	PRJNA223839	223839	Terrabacteria group	Firmicutes	2.91438	32.7	-	JDXZ01	7	3065	2902	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381580	GCA_000572865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/865/GCA_000572865.1_Stap_aure_LPIH6008_V1	-	LPIH6008
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71906	52.1	-	CHLH01	45	4873	4519	4/21/15	2/28/17	Contig	SC	SAMEA2067827	GCA_001362035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/035/GCA_001362035.1_10209_5_54	-	UI3151
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37776	65.6	-	MMHH01	2	4252	4095	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915260	GCA_001841245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/245/GCA_001841245.1_ASM184124v1	-	02-R0879
Escherichia coli MP021552.12	1116135	PRJNA77507	77507	Proteobacteria	Gammaproteobacteria	5.44053	50.3	-	AQCM01	233	6001	5409	4/6/13	5/18/17	Contig	IGS	SAMN00829323	GCA_000354595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/595/GCA_000354595.1_ASM35459v1	-	MP021552.12
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12911	39.6	-	CGZW01	53	2273	1998	4/21/15	3/6/17	Contig	SC	SAMEA1029247	GCA_001347395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/395/GCA_001347395.1_7004_7_67	-	SMRU2899
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.98269	65.8	-	JTYL01	92	6754	6526	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105446	GCA_000796205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/205/GCA_000796205.1_AZPAE14415	25367914	AZPAE14415
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.96462	39.2	-	LYHS01	110	3827	3689	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745484	GCA_001862385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/385/GCA_001862385.1_ASM186238v1	-	XH733
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.61041	57.1	-	FLBC01	64	5709	5454	7/29/16	2/21/17	Scaffold	SC	SAMEA2273651	GCA_900084175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/175/GCA_900084175.1_11983_8_12	-	k1090
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.38988	57.4	-	FLAM01	49	5357	5126	7/29/16	2/21/17	Scaffold	SC	SAMEA2273672	GCA_900084185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/185/GCA_900084185.1_11983_8_28	-	k1296
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.08569	39	-	LYHR01	266	3943	3802	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745485	GCA_001862395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/395/GCA_001862395.1_ASM186239v1	-	XH735
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	6.47354	66.4	-	JUAT01	103	6202	5966	12/4/14	3/16/17	Scaffold	AstraZeneca	SAMN03105386	GCA_000796685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/796/685/GCA_000796685.1_AZPAE12143	25367914	AZPAE12143
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.01661	39.8	-	CHAG01	54	2218	2001	4/21/15	3/5/17	Contig	SC	SAMEA1029268	GCA_001347415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/415/GCA_001347415.1_7038_5_3	-	SMRU2955
Escherichia coli MP021552.7	1116132	PRJNA77501	77501	Proteobacteria	Gammaproteobacteria	5.41031	50.4	-	AQCL01	258	5961	5373	4/6/13	2/24/17	Contig	IGS	SAMN00829324	GCA_000354615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/615/GCA_000354615.2_ASM35461v2	-	MP021552.7
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39012	65.6	-	MMHI01	9	4256	4098	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915259	GCA_001841265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/265/GCA_001841265.1_ASM184126v1	-	01-R0899
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82878	52	-	CGLN01	38	5022	4657	4/21/15	2/28/17	Contig	SC	SAMEA2072496	GCA_001362055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/055/GCA_001362055.1_10349_1_10	-	ERL032330
Staphylococcus aureus LPIH6004	1409517	PRJNA223837	223837	Terrabacteria group	Firmicutes	2.90578	32.7	-	JDYA01	6	3065	2901	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381578	GCA_000572885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/885/GCA_000572885.1_Stap_aure_LPIH6004_V1	-	LPIH6004
Staphylococcus aureus HBHO6050	1409512	PRJNA223832	223832	Terrabacteria group	Firmicutes	2.96958	32.7	-	JDYB01	4	3151	2995	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381573	GCA_000572905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/905/GCA_000572905.1_Stap_aure_HBHO6050_V1	-	HBHO6050
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73013	52	-	CGQJ01	47	4888	4533	4/21/15	2/28/17	Contig	SC	SAMEA2142429	GCA_001362375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/375/GCA_001362375.1_10607_2_29	-	D56393
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40517	65.6	-	MMHK01	2	4285	4134	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915257	GCA_001841275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/275/GCA_001841275.1_ASM184127v1	-	01-R1049
Escherichia coli MP021552.8	1116133	PRJNA77503	77503	Proteobacteria	Gammaproteobacteria	5.62804	50.4	-	AQEW01	71	6152	5579	4/6/13	2/24/17	Contig	IGS	SAMN00829334	GCA_000354735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/735/GCA_000354735.2_ASM35473v2	-	MP021552.8
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.16786	39.4	-	CHAF01	51	2394	2162	4/21/15	3/5/17	Contig	SC	SAMEA1029269	GCA_001347435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/435/GCA_001347435.1_7038_5_22	-	SMRU2974
Pseudomonas aeruginosa	287	PRJNA270953	270953	Proteobacteria	Gammaproteobacteria	6.77923	66.1	-	JXBE01	131	6524	6283	1/14/15	3/16/17	Scaffold	The University of Queensland	SAMN03271886	GCA_000817865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/865/GCA_000817865.1_ASM81786v1	-	ST260
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.7177	38.9	-	LYHQ01	86	3614	3467	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745486	GCA_001862425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/425/GCA_001862425.1_ASM186242v1	-	XH736
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.56001	57.2	-	FLBD01	53	5610	5344	7/29/16	2/21/17	Scaffold	SC	SAMEA2273661	GCA_900084195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/195/GCA_900084195.1_11983_8_20	-	k1210
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.97903	56.7	-	FLBS01	99	6040	5705	5/19/16	2/21/17	Scaffold	SC	SAMEA2273663	GCA_900084205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/205/GCA_900084205.1_11983_8_21	-	k1154
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.95605	38.9	-	LYHO01	105	3812	3677	11/2/16	4/10/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745488	GCA_001862455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/455/GCA_001862455.1_ASM186245v1	-	XH738
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40244	66.4	-	LCSZ01	249	6151	5871	5/14/15	3/17/17	Scaffold	University of Toronto	SAMN03566244	GCA_001007185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/185/GCA_001007185.1_ASM100718v1	-	Pae_CF67.01p
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11058	39.7	-	CHWB01	79	2337	2123	4/21/15	3/5/17	Contig	SC	SAMEA1029277	GCA_001347455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/455/GCA_001347455.1_7038_5_23	-	SMRU2975
Escherichia coli 2866750	1116030	PRJNA77295	77295	Proteobacteria	Gammaproteobacteria	5.16411	50.3	-	AQDG01	126	5565	5126	4/6/13	2/24/17	Contig	IGS	SAMN00829281	GCA_000354755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/755/GCA_000354755.2_ASM35475v2	-	2866750
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3892	65.6	-	MMHJ01	1	4258	4100	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915258	GCA_001841285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/285/GCA_001841285.1_ASM184128v1	-	02-R0325
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.92992	51.8	-	CVAF01	54	5125	4738	4/2/15	2/28/17	Contig	SC	SAMEA2142514	GCA_001362395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/395/GCA_001362395.1_10426_1_1	-	dtc95
Staphylococcus aureus WMCS6047	1409509	PRJNA223829	223829	Terrabacteria group	Firmicutes	2.87415	32.8	-	JDYC01	7	3017	2857	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381570	GCA_000572925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/925/GCA_000572925.1_Stap_aure_WMCS6047_V1	-	WMCS6047
Staphylococcus aureus WMCA6006	1409508	PRJNA223828	223828	Terrabacteria group	Firmicutes	2.88533	32.9	-	JDYD01	5	3016	2860	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381569	GCA_000572945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/945/GCA_000572945.1_Stap_aure_WMCA6006_V1	-	WMCA6006
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93027	51.8	-	CVED01	59	5121	4754	4/2/15	2/28/17	Contig	SC	SAMEA2142627	GCA_001362475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/475/GCA_001362475.1_10540_1_48	-	ct1-105
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39783	65.6	-	MMHL01	5	4278	4103	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915256	GCA_001841325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/325/GCA_001841325.1_ASM184132v1	-	01-R0712
Escherichia coli 2747800	1116010	PRJNA77255	77255	Proteobacteria	Gammaproteobacteria	5.16619	50.5	-	AQEA01	171	5601	5162	4/6/13	2/24/17	Contig	IGS	SAMN00829250	GCA_000354775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/775/GCA_000354775.2_ASM35477v2	-	2747800
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.04412	39.7	-	CIDI01	67	2231	2017	4/21/15	3/5/17	Contig	SC	SAMEA1029278	GCA_001347475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/475/GCA_001347475.1_7054_4_17	-	SMRU3041
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.43586	66.4	-	LCSV01	82	6121	5950	5/14/15	3/17/17	Scaffold	University of Toronto	SAMN03566240	GCA_001007215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/215/GCA_001007215.1_ASM100721v1	-	Pae_CF67.01l
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.95026	38.9	-	LYHN01	89	3818	3683	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745489	GCA_001862475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/475/GCA_001862475.1_ASM186247v1	-	XH739
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.56376	57.2	-	FLAX01	59	5594	5317	7/29/16	2/21/17	Scaffold	SC	SAMEA2273644	GCA_900084215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/215/GCA_900084215.1_11983_8_4	-	k1076
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.58364	57.1	-	FLBF01	46	5626	5380	7/29/16	2/21/17	Scaffold	SC	SAMEA2273655	GCA_900084225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/225/GCA_900084225.1_11983_8_14	-	k1123
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.94445	38.8	-	LYHH01	84	3812	3665	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745495	GCA_001862485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/485/GCA_001862485.1_ASM186248v1	-	XH745
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.37934	66.4	-	LCTB01	406	6126	5798	5/14/15	3/17/17	Scaffold	University of Toronto	SAMN03566246	GCA_001007265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/265/GCA_001007265.1_ASM100726v1	-	Pae_CF67.01r
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.15474	39.4	-	CFDQ01	51	2330	2116	3/15/15	3/5/17	Contig	SC	SAMEA1029289	GCA_001347495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/495/GCA_001347495.1_7054_5_3	-	SMRU3051
Escherichia coli MP021561.2	1116136	PRJNA77509	77509	Proteobacteria	Gammaproteobacteria	5.3674	50.4	-	AQEV01	35	5678	5214	4/6/13	2/24/17	Contig	IGS	SAMN00829335	GCA_000354795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/795/GCA_000354795.2_ASM35479v2	-	MP021561.2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3937	65.6	-	MMHN01	7	4272	4112	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915254	GCA_001841355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/355/GCA_001841355.1_ASM184135v1	-	99-R874
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70927	52.1	-	CVLN01	39	4877	4534	4/9/15	2/28/17	Contig	SC	SAMEA2142779	GCA_001362555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/555/GCA_001362555.1_10562_2_6	-	MDUST134
Staphylococcus aureus GGMC6004	1409507	PRJNA223827	223827	Terrabacteria group	Firmicutes	2.98968	33	-	JDYE01	10	3161	2971	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381568	GCA_000572965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/965/GCA_000572965.1_Stap_aure_GGMC6004_V1	-	GGMC6004
Staphylococcus aureus SCOA6009	1409505	PRJNA223825	223825	Terrabacteria group	Firmicutes	2.95547	32.8	-	JDYF01	7	3139	2974	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381566	GCA_000572985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/985/GCA_000572985.1_Stap_aure_SCOA6009_V1	-	SCOA6009
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74326	52.1	-	CEXM01	51	4908	4541	3/10/15	2/28/17	Contig	SC	SAMEA2142796	GCA_001362575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/575/GCA_001362575.1_10607_2_5	-	1005624
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39094	65.6	-	MMHO01	6	4270	4108	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915253	GCA_001841375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/375/GCA_001841375.1_ASM184137v1	-	00-R1245
Escherichia coli 2867750	1116031	PRJNA77297	77297	Proteobacteria	Gammaproteobacteria	5.09347	50.6	-	AQDF01	135	5483	5028	4/6/13	2/24/17	Contig	IGS	SAMN00829283	GCA_000354815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/815/GCA_000354815.2_ASM35481v2	-	2867750
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.05636	39.7	-	CFCO01	47	2260	2043	3/15/15	3/11/17	Contig	SC	SAMEA1029335	GCA_001347655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/655/GCA_001347655.1_7092_6_9	-	SMRU3105
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.43339	66.4	-	LCSU01	119	6129	5937	5/14/15	3/17/17	Scaffold	University of Toronto	SAMN03566239	GCA_001007275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/275/GCA_001007275.1_ASM100727v1	-	Pae_CF67.01k
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.94221	38.8	-	LYHL01	70	3814	3672	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745491	GCA_001862505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/505/GCA_001862505.1_ASM186250v1	-	XH741
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.67236	57.1	-	FLCD01	89	5745	5470	7/29/16	2/21/17	Scaffold	SC	SAMEA2273671	GCA_900084235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/235/GCA_900084235.1_11983_8_27	-	k1279
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.25856	57.3	-	FLBU01	99	5272	4984	7/29/16	2/21/17	Scaffold	SC	SAMEA2273685	GCA_900084245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/245/GCA_900084245.1_11983_8_40	-	k1337
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.15217	38.9	-	LYHG01	193	4046	3891	11/2/16	4/10/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745496	GCA_001862535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/535/GCA_001862535.1_ASM186253v1	-	XH746
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40562	66.4	-	LCSX01	180	6125	5904	5/14/15	3/17/17	Scaffold	University of Toronto	SAMN03566242	GCA_001007315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/315/GCA_001007315.1_ASM100731v1	-	Pae_CF67.01n
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.07962	39.7	-	CHAK01	61	2298	2092	4/21/15	3/11/17	Contig	SC	SAMEA1029354	GCA_001347675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/675/GCA_001347675.1_7054_4_2	-	SMRU3026
Escherichia coli 180600	1116105	PRJNA77445	77445	Proteobacteria	Gammaproteobacteria	5.07392	50.7	-	AQEG01	149	5393	4978	4/6/13	2/24/17	Contig	IGS	SAMN00829234	GCA_000354835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/835/GCA_000354835.2_ASM35483v2	-	180600
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39204	65.6	-	MMHP01	4	4265	4100	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915252	GCA_001841395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/395/GCA_001841395.1_ASM184139v1	-	01-R0902
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7065	52	-	CVDP01	41	4862	4509	4/2/15	3/3/17	Contig	SC	SAMEA2143167	GCA_001362635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/635/GCA_001362635.1_10540_1_42	-	dn149
Staphylococcus aureus SJUD6085	1409426	PRJNA223746	223746	Terrabacteria group	Firmicutes	2.88193	32.7	-	JDYG01	4	3036	2880	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381487	GCA_000573005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/005/GCA_000573005.1_Stap_aure_SJUD6085_V1	-	SJUD6085
Staphylococcus aureus COAS6044	1409420	PRJNA223740	223740	Terrabacteria group	Firmicutes	2.84357	32.7	-	JDYH01	5	2968	2806	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381481	GCA_000573025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/025/GCA_000573025.1_Stap_aure_COAS6044_V1	-	COAS6044
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93253	51.8	-	CGUS01	55	5121	4739	4/21/15	2/28/17	Contig	SC	SAMEA2144545	GCA_001362975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/975/GCA_001362975.1_10608_2_67	-	2011-008969
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37782	65.6	-	MMHQ01	7	4251	4087	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915251	GCA_001841425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/425/GCA_001841425.1_ASM184142v1	-	00-R1569
Escherichia coli MP021566.1	1116138	PRJNA77513	77513	Proteobacteria	Gammaproteobacteria	5.0164	50.6	-	AQEU01	33	5392	4747	4/6/13	2/22/17	Contig	IGS	SAMN00829337	GCA_000354855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/855/GCA_000354855.1_ASM35485v1	-	MP021566.1
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.10231	39.6	-	CFHN01	108	2320	2099	3/15/15	3/11/17	Contig	SC	SAMEA1029359	GCA_001347695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/695/GCA_001347695.1_7054_6_17	-	SMRU3089
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40259	66.4	-	LCSW01	216	6142	5893	5/14/15	3/17/17	Scaffold	University of Toronto	SAMN03566241	GCA_001007395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/395/GCA_001007395.1_ASM100739v1	-	Pae_CF67.01m
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.04462	39.1	-	LYHE01	106	3929	3779	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745498	GCA_001862555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/555/GCA_001862555.1_ASM186255v1	-	XH748
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.41569	57.3	-	FLAL01	47	5462	5208	7/29/16	2/21/17	Scaffold	SC	SAMEA2273648	GCA_900084255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/255/GCA_900084255.1_11983_8_9	-	k1085
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.44545	57.3	-	FLAR01	40	5514	5260	7/29/16	2/21/17	Scaffold	SC	SAMEA2273664	GCA_900084265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/265/GCA_900084265.1_11983_8_22	-	k1159
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.95794	38.9	-	LYHC01	112	3822	3684	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745500	GCA_001862565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/565/GCA_001862565.1_ASM186256v1	-	XH750
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40376	66.4	-	LCTA01	263	6126	5864	5/14/15	3/17/17	Scaffold	University of Toronto	SAMN03566245	GCA_001007415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/415/GCA_001007415.1_ASM100741v1	-	Pae_CF67.01q
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.04009	39.7	-	CFCN01	61	2230	2008	3/15/15	3/11/17	Contig	SC	SAMEA1029392	GCA_001347895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/895/GCA_001347895.1_7092_6_18	-	SMRU3114
Escherichia coli 2749250	1116011	PRJNA77257	77257	Proteobacteria	Gammaproteobacteria	5.1257	50.5	-	AQDZ01	178	5543	5098	4/6/13	5/18/17	Contig	IGS	SAMN00829264	GCA_000354875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/875/GCA_000354875.1_ASM35487v1	-	2749250
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37801	65.6	-	MMHR01	4	4246	4085	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915250	GCA_001841445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/445/GCA_001841445.1_ASM184144v1	-	00-R1025
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93596	51.8	-	CGQS01	54	5138	4745	4/21/15	2/28/17	Contig	SC	SAMEA2144958	GCA_001363095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/095/GCA_001363095.1_10608_2_12	-	2010-018118
Staphylococcus aureus MISS6103	1409411	PRJNA223731	223731	Terrabacteria group	Firmicutes	2.86526	32.9	-	JDYI01	4	2952	2795	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381472	GCA_000573045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/045/GCA_000573045.1_Stap_aure_MISS6103_V1	-	MISS6103
Staphylococcus aureus LPIH6010	1409526	PRJNA223846	223846	Terrabacteria group	Firmicutes	2.90795	32.8	-	JDXU01	4	3063	2896	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02381587	GCA_000573065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/065/GCA_000573065.1_Stap_aure_LPIH6010_V1	-	LPIH6010
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93272	51.8	-	CFAG01	72	5131	4741	3/10/15	2/28/17	Contig	SC	SAMEA2146149	GCA_001363475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/475/GCA_001363475.1_10608_2_63	-	2012-015146
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40005	65.6	-	MMHS01	6	4271	4111	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05915249	GCA_001841455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/455/GCA_001841455.1_ASM184145v1	-	00-R0145
Escherichia coli 2731150	1116007	PRJNA77249	77249	Proteobacteria	Gammaproteobacteria	5.14236	50.6	-	AQEB01	198	5655	5043	4/6/13	2/24/17	Contig	IGS	SAMN00829263	GCA_000354895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/895/GCA_000354895.2_ASM35489v2	-	2731150
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09373	39.5	-	CIKB01	51	2320	2093	4/21/15	3/11/17	Contig	SC	SAMEA1029401	GCA_001347955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/955/GCA_001347955.1_7092_6_4	-	SMRU3100
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.4172	66.4	-	LCTC01	92	6114	5927	5/14/15	3/17/17	Scaffold	University of Toronto	SAMN03566247	GCA_001007425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/425/GCA_001007425.1_ASM100742v1	-	Pae_CF67.01s
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.65856	38.8	-	LYHB01	78	3542	3417	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745501	GCA_001862585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/585/GCA_001862585.1_ASM186258v1	-	XH751
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.5981	57.1	-	FLBM01	65	5618	5337	7/29/16	2/21/17	Scaffold	SC	SAMEA2273675	GCA_900084275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/275/GCA_900084275.1_11983_8_32	-	k1301
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.34593	57.4	-	FLAO01	51	5374	5100	7/29/16	2/21/17	Scaffold	SC	SAMEA2273700	GCA_900084285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/285/GCA_900084285.1_11983_8_51	-	k1514
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.94297	38.9	-	LYHA01	94	3803	3667	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745502	GCA_001862615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/615/GCA_001862615.1_ASM186261v1	-	XH752
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40911	66.4	-	LCSY01	171	6112	5908	5/14/15	3/17/17	Scaffold	University of Toronto	SAMN03566243	GCA_001007475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/475/GCA_001007475.1_ASM100747v1	-	Pae_CF67.01o
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.0753	39.7	-	CHAE01	60	2304	2087	4/21/15	3/11/17	Contig	SC	SAMEA1029431	GCA_001348035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/035/GCA_001348035.1_7038_4_1	-	SMRU2929
Escherichia coli 174750	1125634	PRJNA78855	78855	Proteobacteria	Gammaproteobacteria	5.28327	50.6	-	AQEI01	311	5630	5104	4/6/13	5/18/17	Contig	IGS	SAMN00858074	GCA_000354915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/915/GCA_000354915.1_ASM35491v1	-	174750
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38778	65.6	-	MMNO01	4	4269	4094	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918585	GCA_001841475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/475/GCA_001841475.1_ASM184147v1	-	M0011025-5
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.92519	51.8	-	CGUN01	55	5128	4728	4/21/15	2/28/17	Contig	SC	SAMEA2146445	GCA_001363555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/555/GCA_001363555.1_10608_2_11	-	2010-015926
Staphylococcus aureus M1337	1402814	PRJNA220164	220164	Terrabacteria group	Firmicutes	2.86794	32.9	-	JEGB01	42	3028	2855	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360971	GCA_000573085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/085/GCA_000573085.1_Stap_aure_M1337_V1	-	M1337
Staphylococcus aureus M1336	1402813	PRJNA220163	220163	Terrabacteria group	Firmicutes	2.8592	32.8	-	JEGC01	39	3013	2850	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360970	GCA_000573105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/105/GCA_000573105.1_Stap_aure_M1336_V1	-	M1336
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93104	51.8	-	CVEA01	57	5128	4752	4/2/15	2/28/17	Contig	SC	SAMEA2147069	GCA_001363815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/815/GCA_001363815.1_10540_1_45	-	dtc90
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38715	65.6	-	MMMN01	6	4261	4100	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918612	GCA_001841505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/505/GCA_001841505.1_ASM184150v1	-	M0003761-5
Escherichia coli 2866450	1116028	PRJNA77291	77291	Proteobacteria	Gammaproteobacteria	5.08403	50.6	-	AQDI01	124	5452	5024	4/6/13	2/24/17	Contig	IGS	SAMN00829278	GCA_000354935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/935/GCA_000354935.2_ASM35493v2	-	2866450
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09989	39.8	-	CFHR01	81	2342	2096	3/15/15	3/11/17	Contig	SC	SAMEA2061481	GCA_001348155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/155/GCA_001348155.1_9803_7_23	-	34
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.41453	66.4	-	LCUT01	123	6124	5913	5/19/15	3/17/17	Scaffold	University of Toronto	SAMN03566250	GCA_001010535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/535/GCA_001010535.1_ASM101053v1	-	Pae_CF67.02c
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.97327	39	-	LYGY01	80	3839	3705	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745504	GCA_001862635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/635/GCA_001862635.1_ASM186263v1	-	XH754
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.76197	57.2	-	FLBV01	62	5838	5554	7/29/16	2/21/17	Scaffold	SC	SAMEA2273702	GCA_900084295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/295/GCA_900084295.1_11983_8_53	-	k1527
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.38721	57.5	-	FLBH01	30	5331	5080	7/29/16	2/21/17	Scaffold	SC	SAMEA2273715	GCA_900084305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/305/GCA_900084305.1_11983_8_64	-	k1596
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.96091	38.9	-	LYGX01	119	3816	3678	11/2/16	4/10/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745505	GCA_001862645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/645/GCA_001862645.1_ASM186264v1	-	XH755
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.38959	66.4	-	LCUR01	132	6123	5801	5/19/15	3/17/17	Scaffold	University of Toronto	SAMN03566248	GCA_001010545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/545/GCA_001010545.1_ASM101054v1	-	Pae_CF67.02a
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.06257	39.8	-	CHWD01	47	2273	2056	4/21/15	3/11/17	Contig	SC	SAMEA2061483	GCA_001348175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/175/GCA_001348175.1_9803_7_26	-	34
Escherichia coli 2866550	1116029	PRJNA77293	77293	Proteobacteria	Gammaproteobacteria	5.1047	50.6	-	AQDH01	130	5476	5028	4/6/13	5/18/17	Contig	IGS	SAMN00829279	GCA_000354955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/955/GCA_000354955.1_ASM35495v1	-	2866550
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40171	65.6	-	MMNQ01	9	4273	4102	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918583	GCA_001841525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/525/GCA_001841525.1_ASM184152v1	-	M0010326-8
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72	52	-	CGPE01	50	4880	4525	4/21/15	2/28/17	Contig	SC	SAMEA2147103	GCA_001363835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/835/GCA_001363835.1_10607_2_20	-	1003078
Staphylococcus aureus M1334	1402812	PRJNA220162	220162	Terrabacteria group	Firmicutes	2.83827	32.7	-	JEGD01	49	2980	2849	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360969	GCA_000573125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/125/GCA_000573125.1_Stap_aure_M1334_V1	-	M1334
Staphylococcus aureus M1333	1402811	PRJNA220161	220161	Terrabacteria group	Firmicutes	2.8402	32.7	-	JEGE01	56	2991	2852	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360968	GCA_000573145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/145/GCA_000573145.1_Stap_aure_M1333_V1	-	M1333
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93445	51.8	-	CHMB01	64	5141	4752	4/21/15	2/28/17	Contig	SC	SAMEA2147418	GCA_001363995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/995/GCA_001363995.1_10608_2_36	-	2012-016786
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36797	65.6	-	MMNW01	2	4240	4082	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918577	GCA_001841545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/545/GCA_001841545.1_ASM184154v1	-	M0005584-9
Escherichia coli 2865200	1116026	PRJNA77287	77287	Proteobacteria	Gammaproteobacteria	5.30555	50.5	-	AQDJ01	171	5687	5213	4/6/13	5/18/17	Contig	IGS	SAMN00829276	GCA_000354975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/975/GCA_000354975.1_ASM35497v1	-	2865200
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.05561	39.6	-	CFGO01	74	2291	2055	3/15/15	3/11/17	Contig	SC	SAMEA2061497	GCA_001348195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/195/GCA_001348195.1_9803_7_36	-	35F
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40346	66.4	-	LDKL01	146	6111	5923	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566256	GCA_001023615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/615/GCA_001023615.1_ASM102361v1	-	Pae_CF67.02i
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.89806	39	-	LYGW01	136	3755	3619	11/2/16	4/10/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745506	GCA_001862665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/665/GCA_001862665.1_ASM186266v1	-	XH756
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.43932	57.3	-	FLAU01	46	5466	5230	7/29/16	2/21/17	Scaffold	SC	SAMEA2273690	GCA_900084315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/315/GCA_900084315.1_11983_8_45	-	k1419
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.29091	57.3	-	FLBW01	59	5274	5039	7/29/16	2/21/17	Scaffold	SC	SAMEA2273703	GCA_900084325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/325/GCA_900084325.1_11983_8_54	-	k1529
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.95045	38.9	-	LYGT01	109	3812	3672	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745509	GCA_001862715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/715/GCA_001862715.1_ASM186271v1	-	XH763
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.41119	66.4	-	LDKG01	149	6115	5906	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566251	GCA_001023625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/625/GCA_001023625.1_ASM102362v1	-	Pae_CF67.02d
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12499	39.4	-	CFHQ01	61	2322	2091	3/15/15	3/11/17	Contig	SC	SAMEA2061707	GCA_001348215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/215/GCA_001348215.1_9803_7_34	-	19F
Escherichia coli 2860050	1116021	PRJNA77277	77277	Proteobacteria	Gammaproteobacteria	5.12946	50.6	-	AQDL01	184	5543	5095	4/6/13	2/24/17	Contig	IGS	SAMN00829271	GCA_000354995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/354/995/GCA_000354995.2_ASM35499v2	-	2860050
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.399	65.6	-	MMMO01	2	4262	4105	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918611	GCA_001841565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/565/GCA_001841565.1_ASM184156v1	-	M0016353-6
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81725	51.9	-	CVDC01	46	5017	4631	4/2/15	2/28/17	Contig	SC	SAMEA2147698	GCA_001364095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/095/GCA_001364095.1_10540_1_23	-	dn154
Staphylococcus aureus M1331	1402809	PRJNA220159	220159	Terrabacteria group	Firmicutes	2.84434	32.9	-	JEGF01	52	2990	2825	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360966	GCA_000573165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/165/GCA_000573165.1_Stap_aure_M1331_V1	-	M1331
Staphylococcus aureus M1330	1402808	PRJNA220158	220158	Terrabacteria group	Firmicutes	2.86692	32.8	-	JEGG01	41	3016	2843	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360965	GCA_000573185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/185/GCA_000573185.1_Stap_aure_M1330_V1	-	M1330
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.02994	51.8	-	CVEE01	52	5256	4873	4/2/15	2/28/17	Contig	SC	SAMEA2148086	GCA_001364175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/175/GCA_001364175.1_10540_1_50	-	ty3-226
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39905	65.6	-	MMNF01	1	4276	4133	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918594	GCA_001841575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/575/GCA_001841575.1_ASM184157v1	-	M0021672-2
Escherichia coli 2851500	1116128	PRJNA77493	77493	Proteobacteria	Gammaproteobacteria	5.04426	50.6	-	AQDN01	109	5369	4975	4/6/13	2/24/17	Contig	IGS	SAMN00829267	GCA_000355015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/015/GCA_000355015.2_ASM35501v2	-	2851500
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11933	39.4	-	CIHZ01	94	2379	2129	4/21/15	3/11/17	Contig	SC	SAMEA2061718	GCA_001348235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/235/GCA_001348235.1_9803_7_50	-	10F
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.41896	66.4	-	LDKJ01	85	6118	5942	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566254	GCA_001023635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/635/GCA_001023635.1_ASM102363v1	-	Pae_CF67.02g
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.6046	39	-	LYGS01	168	3436	3211	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745510	GCA_001862725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/725/GCA_001862725.1_ASM186272v1	-	XH764
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.5207	57.3	-	FLBZ01	65	5529	5283	7/29/16	2/21/17	Scaffold	SC	SAMEA2273659	GCA_900084335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/335/GCA_900084335.1_11983_8_18	-	k1207
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.57675	57	-	FLAY01	39	5605	5365	7/29/16	2/21/17	Scaffold	SC	SAMEA2273643	GCA_900084345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/345/GCA_900084345.1_11983_8_3	-	k1061
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.98769	39	-	LYGQ01	123	3858	3712	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745512	GCA_001862735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/735/GCA_001862735.1_ASM186273v1	-	XH766
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40061	66.4	-	LDKN01	195	6117	5909	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566258	GCA_001023675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/675/GCA_001023675.1_ASM102367v1	-	Pae_CF67.02k
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11214	39.5	-	CHAO01	61	2334	2107	4/21/15	3/11/17	Contig	SC	SAMEA2061748	GCA_001348275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/275/GCA_001348275.1_9803_8_49	-	23F
Escherichia coli 2861200	1116023	PRJNA77281	77281	Proteobacteria	Gammaproteobacteria	4.9745	50.5	-	AQDK01	160	5403	4850	4/6/13	2/24/17	Contig	IGS	SAMN00829274	GCA_000355035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/035/GCA_000355035.2_ASM35503v2	-	2861200
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39913	65.6	-	MMMZ01	5	4269	4099	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918600	GCA_001841605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/605/GCA_001841605.1_ASM184160v1	-	M0024434-4
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.76426	52.1	-	CGPQ01	42	4924	4561	4/21/15	2/28/17	Contig	SC	SAMEA2148246	GCA_001364255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/255/GCA_001364255.1_10607_1_51	-	2010-002168
Staphylococcus aureus M1329	1402807	PRJNA220157	220157	Terrabacteria group	Firmicutes	2.84319	32.7	-	JEGH01	39	3012	2853	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360964	GCA_000573205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/205/GCA_000573205.1_Stap_aure_M1329_V1	-	M1329
Staphylococcus aureus M1328	1402806	PRJNA220156	220156	Terrabacteria group	Firmicutes	2.87232	32.9	-	JEGI01	19	3011	2846	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360963	GCA_000573225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/225/GCA_000573225.1_Stap_aure_M1328_V1	-	M1328
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93234	51.8	-	CGQZ01	55	5150	4756	4/21/15	2/28/17	Contig	SC	SAMEA2148252	GCA_001364275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/275/GCA_001364275.1_10608_2_5	-	2007-016977
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38359	65.6	-	MMNM01	9	4258	4093	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918587	GCA_001841615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/615/GCA_001841615.1_ASM184161v1	-	M0014029-4
Escherichia coli 2850400	1116018	PRJNA77271	77271	Proteobacteria	Gammaproteobacteria	5.07053	50.6	-	AQDP01	117	5440	5006	4/6/13	5/18/17	Contig	IGS	SAMN00829269	GCA_000355055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/055/GCA_000355055.1_ASM35505v1	-	2850400
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.08936	39.7	-	CIHX01	63	2320	2094	4/21/15	3/11/17	Contig	SC	SAMEA2061933	GCA_001348295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/295/GCA_001348295.1_9803_7_67	-	19F
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.4005	66.4	-	LDKO01	180	6117	5911	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566259	GCA_001023685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/685/GCA_001023685.1_ASM102368v1	-	Pae_CF67.02l
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.91747	39	-	LYGO01	119	3800	3652	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745514	GCA_001862775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/775/GCA_001862775.1_ASM186277v1	-	XH768
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.58411	57.1	-	FLCC01	57	5673	5411	7/29/16	2/21/17	Scaffold	SC	SAMEA2273704	GCA_900084355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/355/GCA_900084355.1_11983_8_55	-	k1534
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.59127	57.2	-	FLCE01	55	5649	5403	7/29/16	2/21/17	Scaffold	SC	SAMEA2273658	GCA_900084365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/365/GCA_900084365.1_11983_8_17	-	k1205
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.967	38.9	-	LYGN01	147	3823	3652	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745515	GCA_001862795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/795/GCA_001862795.1_ASM186279v1	-	XH769
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.4047	66.4	-	LDKP01	141	6121	5930	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566260	GCA_001023705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/705/GCA_001023705.1_ASM102370v1	-	Pae_CF67.02m
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11066	39.7	-	CHAM01	57	2342	2106	4/21/15	3/11/17	Contig	SC	SAMEA2061954	GCA_001348335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/335/GCA_001348335.1_9803_8_15	-	19F
Escherichia coli P0302308.1	1116153	PRJNA77543	77543	Proteobacteria	Gammaproteobacteria	5.1844	50.7	-	AQEO01	43	5455	5054	4/6/13	2/24/17	Contig	IGS	SAMN00829419	GCA_000355075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/075/GCA_000355075.2_ASM35507v2	-	P0302308.1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39219	65.6	-	MMOE01	1	4261	4102	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918569	GCA_001841645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/645/GCA_001841645.1_ASM184164v1	-	M0002202-1
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93468	51.8	-	CEZR01	54	5140	4750	3/11/15	2/28/17	Contig	SC	SAMEA2148542	GCA_001364375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/375/GCA_001364375.1_10608_2_26	-	2008-020523
Staphylococcus aureus M1326	1402805	PRJNA220155	220155	Terrabacteria group	Firmicutes	2.85978	32.8	-	JEGJ01	38	3019	2851	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360962	GCA_000573245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/245/GCA_000573245.1_Stap_aure_M1326_V1	-	M1326
Staphylococcus aureus M1325	1402804	PRJNA220154	220154	Terrabacteria group	Firmicutes	2.88602	32.9	-	JEGK01	69	3063	2898	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360961	GCA_000573265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/265/GCA_000573265.1_Stap_aure_M1325_V1	-	M1325
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93306	51.8	-	CGQM01	56	5145	4751	4/21/15	2/28/17	Contig	SC	SAMEA2149147	GCA_001364515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/515/GCA_001364515.1_10608_2_24	-	2009-018790
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.42183	65.6	-	MMOF01	2	4301	4133	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918568	GCA_001841665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/665/GCA_001841665.1_ASM184166v1	-	M0001620-5
Escherichia coli P0304777.1	1116163	PRJNA77563	77563	Proteobacteria	Gammaproteobacteria	5.19161	50.8	-	AQEN01	38	5441	5014	4/6/13	2/24/17	Contig	IGS	SAMN00829433	GCA_000355095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/095/GCA_000355095.2_ASM35509v2	-	P0304777.1
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.22348	39.4	-	CFGV01	75	2459	2192	3/15/15	3/11/17	Contig	SC	SAMEA2061962	GCA_001348375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/375/GCA_001348375.1_9803_8_76	-	6B
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40259	66.4	-	LDKV01	138	6102	5922	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566266	GCA_001023735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/735/GCA_001023735.1_ASM102373v1	-	Pae_CF67.02s
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.76596	39	-	LYGL01	60	3604	3487	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745517	GCA_001862805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/805/GCA_001862805.1_ASM186280v1	-	XH771
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.46885	57.3	-	FLBE01	51	5532	5297	7/29/16	2/21/17	Scaffold	SC	SAMEA2273698	GCA_900084375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/375/GCA_900084375.1_11983_8_49	-	k1485
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.27176	57.4	-	FLAJ01	25	5248	5041	7/29/16	2/21/17	Scaffold	SC	SAMEA2273684	GCA_900084385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/385/GCA_900084385.1_11983_8_39	-	k1336
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.87923	39	-	LYGK01	92	3715	3581	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745518	GCA_001862825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/825/GCA_001862825.1_ASM186282v1	-	XH778
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40665	66.4	-	LDKX01	128	6120	5939	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566268	GCA_001023755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/755/GCA_001023755.1_ASM102375v1	-	Pae_CF67.03a
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.10539	39.7	-	CHAN01	65	2331	2104	4/21/15	3/11/17	Contig	SC	SAMEA2062157	GCA_001348395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/395/GCA_001348395.1_9803_8_23	-	19F
Escherichia coli ThroopD	1116001	PRJNA77237	77237	Proteobacteria	Gammaproteobacteria	5.41923	50.7	-	AQEJ01	42	5819	5234	4/6/13	2/24/17	Contig	IGS	SAMN00829549	GCA_000355115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/115/GCA_000355115.2_ASM35511v2	-	ThroopD
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35141	65.6	-	MMNY01	3	4239	4082	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918575	GCA_001841685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/685/GCA_001841685.1_ASM184168v1	-	M0004513-9
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72131	52	-	CEYJ01	44	4874	4515	3/9/15	2/28/17	Contig	SC	SAMEA2149639	GCA_001364615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/615/GCA_001364615.1_10561_2_8	-	np5
Staphylococcus aureus M1324	1402803	PRJNA220153	220153	Terrabacteria group	Firmicutes	2.90152	32.9	-	JEGL01	28	3062	2894	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360960	GCA_000573285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/285/GCA_000573285.1_Stap_aure_M1324_V1	-	M1324
Staphylococcus aureus M1323	1402802	PRJNA220152	220152	Terrabacteria group	Firmicutes	2.89306	32.9	-	JEGM01	33	3051	2879	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360959	GCA_000573305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/305/GCA_000573305.1_Stap_aure_M1323_V1	-	M1323
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.02774	51.8	-	CVEC01	52	5257	4876	4/2/15	2/28/17	Contig	SC	SAMEA2149786	GCA_001364655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/655/GCA_001364655.1_10540_1_47	-	ty3-224
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36399	65.6	-	MMNS01	2	4250	4095	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918581	GCA_001841705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/705/GCA_001841705.1_ASM184170v1	-	M0009119-0
Escherichia coli 2719100	1116119	PRJNA77475	77475	Proteobacteria	Gammaproteobacteria	5.28317	50.8	-	AQFG01	33	5549	5058	4/6/13	2/24/17	Contig	IGS	SAMN00829228	GCA_000355155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/155/GCA_000355155.2_ASM35515v2	-	2719100
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09729	39.7	-	CHIH01	42	2324	2088	4/21/15	3/11/17	Contig	SC	SAMEA2062163	GCA_001348435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/435/GCA_001348435.1_9803_8_32	-	19F
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.4022	66.4	-	LDKZ01	174	6111	5908	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566270	GCA_001023765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/765/GCA_001023765.1_ASM102376v1	-	Pae_CF67.03c
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.93737	38.8	-	LYGJ01	77	3807	3669	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745519	GCA_001862855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/855/GCA_001862855.1_ASM186285v1	-	XH779
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.59149	57.1	-	FLBN01	146	5759	5401	7/29/16	2/21/17	Scaffold	SC	SAMEA2273691	GCA_900084395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/395/GCA_900084395.1_11983_8_46	-	k1424
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.57175	57.2	-	FLBX01	66	5598	5318	7/29/16	2/21/17	Scaffold	SC	SAMEA2273683	GCA_900084405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/405/GCA_900084405.1_11983_8_38	-	k1326
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.89971	38.8	-	LYGI01	82	3752	3622	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745520	GCA_001862875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/875/GCA_001862875.1_ASM186287v1	-	XH786
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.60499	65.5	-	LDLG01	824	6165	5954	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566277	GCA_001023775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/775/GCA_001023775.1_ASM102377v1	-	Pae_CF67.03j
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.13345	39.6	-	CHWK01	68	2308	2036	4/21/15	3/11/17	Contig	SC	SAMEA2062168	GCA_001348455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/455/GCA_001348455.1_9803_8_39	-	type strain: N
Escherichia coli 2720900	1116120	PRJNA77477	77477	Proteobacteria	Gammaproteobacteria	5.42218	50.7	-	AQFF01	50	5767	5277	4/6/13	2/22/17	Contig	IGS	SAMN00829230	GCA_000355175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/175/GCA_000355175.1_ASM35517v1	-	2720900
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39702	65.6	-	MMNR01	2	4275	4113	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918582	GCA_001841715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/715/GCA_001841715.1_ASM184171v1	-	M0009260-2
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72377	52	-	CVDG01	40	4897	4529	4/2/15	2/28/17	Contig	SC	SAMEA2150675	GCA_001364855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/855/GCA_001364855.1_10540_1_40	-	dn176
Staphylococcus aureus M1319	1402801	PRJNA220151	220151	Terrabacteria group	Firmicutes	2.92506	32.7	-	JEGN01	71	3139	2962	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360958	GCA_000573325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/325/GCA_000573325.1_Stap_aure_M1319_V1	-	M1319
Staphylococcus aureus M1318	1402800	PRJNA220150	220150	Terrabacteria group	Firmicutes	2.85568	32.9	-	JEGO01	43	3000	2820	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360957	GCA_000573345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/345/GCA_000573345.1_Stap_aure_M1318_V1	-	M1318
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.02953	51.8	-	CVBO01	57	5260	4865	4/2/15	2/28/17	Contig	SC	SAMEA2151210	GCA_001364915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/915/GCA_001364915.1_10426_1_51	-	dty1-88
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39971	65.6	-	MMOA01	5	4281	4117	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918573	GCA_001841725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/725/GCA_001841725.1_ASM184172v1	-	M0003743-3
Escherichia coli Envira 10/1	1115998	PRJNA77231	77231	Proteobacteria	Gammaproteobacteria	5.40357	50.6	-	AQFD01	50	5802	5305	4/6/13	2/24/17	Contig	IGS	SAMN00829717	GCA_000355195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/195/GCA_000355195.2_ASM35519v2	-	Envira 10/1
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.06104	39.6	-	CIIQ01	56	2278	2011	4/21/15	3/11/17	Contig	SC	SAMEA2062171	GCA_001348475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/475/GCA_001348475.1_9803_8_44	-	18C
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39923	66.4	-	LDLK01	155	6150	5901	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566281	GCA_001023815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/815/GCA_001023815.1_ASM102381v1	-	Pae_CF67.03n
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.86434	38.8	-	LYGH01	80	3727	3594	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745521	GCA_001862885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/885/GCA_001862885.1_ASM186288v1	-	XH787
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.66201	57	-	FLBL01	66	5663	5393	7/29/16	2/21/17	Scaffold	SC	SAMEA2273669	GCA_900084415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/415/GCA_900084415.1_11983_8_25	-	k1264
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.40183	57.4	-	FLAW01	45	5380	5128	7/29/16	2/21/17	Scaffold	SC	SAMEA2273638	GCA_900084425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/425/GCA_900084425.1_11983_8_1	-	k1031
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.928	38.9	-	LYGG01	97	3797	3663	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745522	GCA_001862895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/895/GCA_001862895.1_ASM186289v1	-	XH792
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40657	66.4	-	LDLM01	145	6118	5929	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566283	GCA_001023835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/835/GCA_001023835.1_ASM102383v1	-	Pae_CF67.03p
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.18453	39.5	-	CHWG01	83	2444	2202	4/21/15	3/11/17	Contig	SC	SAMEA2062176	GCA_001348495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/495/GCA_001348495.1_9803_8_51	-	23F
Escherichia coli Envira 8/11	1115997	PRJNA77229	77229	Proteobacteria	Gammaproteobacteria	5.46202	50.6	-	AQFC01	62	5855	5368	4/6/13	2/24/17	Contig	IGS	SAMN00829025	GCA_000355215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/215/GCA_000355215.2_ASM35521v2	-	Envira 8/11
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39615	65.6	-	MMNG01	3	4275	4121	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918593	GCA_001841765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/765/GCA_001841765.1_ASM184176v1	-	M0021577-3
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.02884	51.8	-	CVEL01	52	5260	4879	4/2/15	2/28/17	Contig	SC	SAMEA2151787	GCA_001364995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/995/GCA_001364995.1_10540_1_57	-	dty1-80
Staphylococcus aureus M1317	1402799	PRJNA220149	220149	Terrabacteria group	Firmicutes	2.88402	32.8	-	JEGP01	46	3042	2875	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360956	GCA_000573365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/365/GCA_000573365.1_Stap_aure_M1317_V1	-	M1317
Staphylococcus aureus M1315	1402797	PRJNA220147	220147	Terrabacteria group	Firmicutes	2.85828	32.9	-	JEGQ01	35	3016	2847	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360954	GCA_000573385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/385/GCA_000573385.1_Stap_aure_M1315_V1	-	M1315
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93265	51.8	-	CGRB01	53	5125	4745	4/21/15	2/28/17	Contig	SC	SAMEA2152269	GCA_001365115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/115/GCA_001365115.1_10608_2_22	-	2012-010742
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39843	65.6	-	MMNK01	6	4274	4111	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918589	GCA_001841785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/785/GCA_001841785.1_ASM184178v1	-	M0015869-2
Escherichia coli Jurua 18/11	1115999	PRJNA77233	77233	Proteobacteria	Gammaproteobacteria	5.19407	50.7	-	AQFB01	30	5424	5038	4/6/13	2/24/17	Contig	IGS	SAMN00829297	GCA_000355235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/235/GCA_000355235.2_ASM35523v2	-	Jurua 18/11
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07121	39.7	-	CIBX01	83	2286	2086	4/21/15	3/13/17	Contig	SC	SAMEA1024850	GCA_001403855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/403/855/GCA_001403855.1_6730_4_18	-	SMRU642
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40434	66.4	-	LDLS01	90	6121	5941	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566289	GCA_001023845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/845/GCA_001023845.1_ASM102384v1	-	Pae_CF67.04d
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.92004	38.8	-	LYGD01	70	3783	3650	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745525	GCA_001862955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/955/GCA_001862955.1_ASM186295v1	-	XH795
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.38837	57.4	-	FLBK01	36	5422	5168	7/29/16	2/21/17	Scaffold	SC	SAMEA2273650	GCA_900084435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/435/GCA_900084435.1_11983_8_11	-	k1089
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.47197	57.2	-	FLAZ01	56	5444	5219	7/29/16	2/21/17	Scaffold	SC	SAMEA2273719	GCA_900084445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/445/GCA_900084445.1_11983_8_67	-	k1634
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.77879	38.9	-	LYGB01	85	3651	3518	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745527	GCA_001862975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/975/GCA_001862975.1_ASM186297v1	-	XH797
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40139	66.4	-	LDLV01	169	6121	5921	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566292	GCA_001023875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/875/GCA_001023875.1_ASM102387v1	-	Pae_CF67.04g
Streptococcus pneumoniae	1313	PRJNA296668	296668	Terrabacteria group	Firmicutes	2.06947	39.7	-	LKAA01	60	2297	2064	2/12/16	3/13/17	Contig	UNIVERSIDAD AUTONOMA DE NUEVO LEON	SAMN04101983	GCA_001560935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/935/GCA_001560935.1_ASM156093v1	27034499	MTY1662SN214
Escherichia coli Jurua 20/10	1116000	PRJNA77235	77235	Proteobacteria	Gammaproteobacteria	5.16027	50.6	-	AQFA01	56	5438	5000	4/6/13	2/24/17	Contig	IGS	SAMN00829299	GCA_000355255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/255/GCA_000355255.2_ASM35525v2	-	Jurua 20/10
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40329	65.6	-	MMNN01	3	4281	4119	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918586	GCA_001841805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/805/GCA_001841805.1_ASM184180v1	-	M0013217-6
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70796	52.1	-	CFAU01	44	4866	4516	3/11/15	2/28/17	Contig	SC	SAMEA2152530	GCA_001365215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/215/GCA_001365215.1_10607_2_12	-	1007000
Staphylococcus aureus M1314	1402796	PRJNA220146	220146	Terrabacteria group	Firmicutes	2.86009	32.8	-	JEGR01	47	3031	2862	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360953	GCA_000573405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/405/GCA_000573405.1_Stap_aure_M1314_V1	-	M1314
Staphylococcus aureus M1313	1402795	PRJNA220145	220145	Terrabacteria group	Firmicutes	2.90359	32.9	-	JEGS01	57	3075	2893	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360952	GCA_000573425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/425/GCA_000573425.1_Stap_aure_M1313_V1	-	M1313
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.75295	52	-	CGTR01	42	4920	4557	4/21/15	2/28/17	Contig	SC	SAMEA2152949	GCA_001365355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/355/GCA_001365355.1_10492_1_13	-	MDUST147
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38302	65.6	-	MMND01	4	4258	4097	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918596	GCA_001841815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/815/GCA_001841815.1_ASM184181v1	-	M0022228-2
Escherichia coli MP020940.1	1116140	PRJNA77517	77517	Proteobacteria	Gammaproteobacteria	5.25094	50.5	-	AQEZ01	55	5539	5108	4/6/13	2/24/17	Contig	IGS	SAMN00829300	GCA_000355275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/275/GCA_000355275.2_ASM35527v2	-	MP020940.1
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08447	39.7	-	CFEK01	72	2297	2089	3/15/15	3/5/17	Contig	SC	SAMEA1025859	GCA_001566075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/075/GCA_001566075.1_6871_1_8	-	SMRU1784
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40301	66.4	-	LDLY01	128	6117	5935	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566295	GCA_001023895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/895/GCA_001023895.1_ASM102389v1	-	Pae_CF67.04j
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.02042	38.9	-	LYGA01	70	3892	3758	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745528	GCA_001862985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/985/GCA_001862985.1_ASM186298v1	-	XH798
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.35926	57.3	-	FLBA01	67	5390	5147	7/29/16	2/21/17	Scaffold	SC	SAMEA2273713	GCA_900084455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/455/GCA_900084455.1_11983_8_62	-	k1580
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.47127	57.3	-	FLBJ01	48	5449	5207	7/29/16	2/21/17	Scaffold	SC	SAMEA2273699	GCA_900084465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/465/GCA_900084465.1_11983_8_50	-	k1490
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.90891	38.8	-	LYFY01	106	3767	3629	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745530	GCA_001863015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/015/GCA_001863015.1_ASM186301v1	-	XH800
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40119	66.4	-	LDME01	173	6113	5915	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566301	GCA_001023915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/915/GCA_001023915.1_ASM102391v1	-	Pae_CF67.04p
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.07201	39.5	-	CHBJ02	159	2229	2030	4/21/15	3/5/17	Contig	SC	SAMEA1032452	GCA_001566235.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/235/GCA_001566235.2_6999_2_6	-	R34-3212
Escherichia coli MP020980.2	1116139	PRJNA77515	77515	Proteobacteria	Gammaproteobacteria	5.48316	50.6	-	AQEY01	51	5815	5355	4/6/13	2/22/17	Contig	IGS	SAMN00829302	GCA_000355295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/295/GCA_000355295.1_ASM35529v1	-	MP020980.2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40124	65.6	-	MMNV01	2	4282	4120	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918578	GCA_001841845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/845/GCA_001841845.1_ASM184184v1	-	M0005771-2
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74311	52.1	-	CGQU01	52	4908	4548	4/21/15	2/28/17	Contig	SC	SAMEA2153918	GCA_001365595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/595/GCA_001365595.1_10607_2_7	-	BKQ22S
Staphylococcus aureus M1312	1402794	PRJNA220144	220144	Terrabacteria group	Firmicutes	2.84993	32.9	-	JEGT01	18	3001	2832	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360951	GCA_000573445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/445/GCA_000573445.1_Stap_aure_M1312_V1	-	M1312
Staphylococcus aureus M1310	1402793	PRJNA220143	220143	Terrabacteria group	Firmicutes	2.94716	32.9	-	JEGU01	37	3106	2931	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360950	GCA_000573465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/465/GCA_000573465.1_Stap_aure_M1310_V1	-	M1310
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93137	51.8	-	CGUT01	54	5131	4745	4/21/15	2/28/17	Contig	SC	SAMEA2154549	GCA_001365895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/895/GCA_001365895.1_10608_2_37	-	01-2010-001056
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38235	65.6	-	MMNX01	1	4254	4101	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918576	GCA_001841865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/865/GCA_001841865.1_ASM184186v1	-	M0005016-2
Escherichia coli P0301867.1	1116066	PRJNA77367	77367	Proteobacteria	Gammaproteobacteria	5.34695	50.8	-	AQEQ01	34	5634	5132	4/6/13	2/24/17	Contig	IGS	SAMN00829372	GCA_000355315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/315/GCA_000355315.2_ASM35531v2	-	P0301867.1
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.09615	39.6	-	CFIW02	168	2274	2073	3/15/15	3/5/17	Contig	SC	SAMEA1463196	GCA_001566255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/255/GCA_001566255.2_7622_4_20	-	LE4055
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40155	66.4	-	LDKH01	185	6113	5904	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566252	GCA_001023925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/925/GCA_001023925.1_ASM102392v1	-	Pae_CF67.02e
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.98212	39.3	-	LYFW01	217	3808	3678	11/2/16	4/10/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745532	GCA_001863035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/035/GCA_001863035.1_ASM186303v1	-	XH802
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.48812	57.3	-	FLBO01	59	5553	5319	7/29/16	2/21/17	Scaffold	SC	SAMEA2273694	GCA_900084475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/475/GCA_900084475.1_11983_8_47	-	k1446
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.41711	57.2	-	FLBP01	38	5438	5200	7/29/16	2/21/17	Scaffold	SC	SAMEA2273712	GCA_900084485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/485/GCA_900084485.1_11983_8_61	-	k1579
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.32508	39.8	-	LYFV01	1268	3920	3769	11/2/16	4/10/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745533	GCA_001863055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/055/GCA_001863055.1_ASM186305v1	-	XH803
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39166	66.4	-	LDKQ01	203	6100	5888	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566261	GCA_001023955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/955/GCA_001023955.1_ASM102395v1	-	Pae_CF67.02n
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.06014	39.6	-	CRYL02	106	2231	2015	7/18/15	3/15/17	Contig	SC	SAMEA1463182	GCA_001566275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/275/GCA_001566275.1_7622_2_24	-	BR1076
Escherichia coli 2850750	1116019	PRJNA77273	77273	Proteobacteria	Gammaproteobacteria	5.09918	50.6	-	AQDO01	126	5477	5038	4/6/13	2/25/17	Contig	IGS	SAMN00829268	GCA_000355335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/335/GCA_000355335.2_ASM35533v2	-	2850750
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39251	65.6	-	MMOB01	4	4274	4111	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918572	GCA_001841885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/885/GCA_001841885.1_ASM184188v1	-	M0003662-5
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93293	51.8	-	CGUQ01	59	5135	4740	4/21/15	2/28/17	Contig	SC	SAMEA2155798	GCA_001366195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/195/GCA_001366195.1_10608_2_21	-	2012-010535
Staphylococcus aureus M1308	1402792	PRJNA220142	220142	Terrabacteria group	Firmicutes	2.87788	32.8	-	JEGV01	53	3031	2856	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360949	GCA_000573485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/485/GCA_000573485.1_Stap_aure_M1308_V1	-	M1308
Staphylococcus aureus M1305	1402790	PRJNA220140	220140	Terrabacteria group	Firmicutes	2.85685	32.8	-	JEGW01	31	3008	2851	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360947	GCA_000573505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/505/GCA_000573505.1_Stap_aure_M1305_V1	-	M1305
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93132	51.8	-	CGQR01	73	5131	4731	4/21/15	2/28/17	Contig	SC	SAMEA2156527	GCA_001366295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/295/GCA_001366295.1_10608_2_30	-	2012-011897
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39049	65.6	-	MMNP01	2	4261	4097	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918584	GCA_001841895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/895/GCA_001841895.1_ASM184189v1	-	M0010396-1
Escherichia coli 2853500	1116020	PRJNA77275	77275	Proteobacteria	Gammaproteobacteria	5.07925	50.6	-	AQDM01	128	5465	5013	4/6/13	5/18/17	Contig	IGS	SAMN00829270	GCA_000355355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/355/GCA_000355355.1_ASM35535v1	-	2853500
Streptococcus pneumoniae	1313	PRJNA296668	296668	Terrabacteria group	Firmicutes	2.1906	40.9	-	LSSU01	235	2305	2060	3/2/16	3/12/17	Contig	UNIVERSIDAD AUTONOMA DE NUEVO LEON	SAMN04496895	GCA_001578475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/475/GCA_001578475.1_SN814-2015	27103715	MTY32702340SN814
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40807	66.4	-	LDKS01	128	6116	5930	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566263	GCA_001023975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/975/GCA_001023975.1_ASM102397v1	-	Pae_CF67.02p
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.95266	39	-	LYFU01	129	3805	3661	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745534	GCA_001863065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/065/GCA_001863065.1_ASM186306v1	-	XH804
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.42479	57.4	-	FLAV01	43	5506	5235	7/29/16	2/21/17	Scaffold	SC	SAMEA2273689	GCA_900084495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/495/GCA_900084495.1_11983_8_44	-	k1403
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.57719	57.2	-	FLCA01	96	5604	5320	7/29/16	2/21/17	Scaffold	SC	SAMEA2273721	GCA_900084505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/505/GCA_900084505.1_11983_8_68	-	k1639
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.93777	38.8	-	LYFT01	88	3813	3670	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745535	GCA_001863085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/085/GCA_001863085.1_ASM186308v1	-	XH805
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.4039	66.4	-	LDKR01	166	6119	5917	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566262	GCA_001023985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/985/GCA_001023985.1_ASM102398v1	-	Pae_CF67.02o
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.06065	39.7	-	LJVK01	192	2291	2043	3/7/16	3/12/17	Contig	National Institute for Communicable Diseases	SAMN03964650	GCA_001581155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/155/GCA_001581155.1_ASM158115v1	-	NTPn 45
Escherichia coli 2848050	1116127	PRJNA77491	77491	Proteobacteria	Gammaproteobacteria	5.11899	50.4	-	AQDQ01	147	5566	5034	4/6/13	2/24/17	Contig	IGS	SAMN00829266	GCA_000355375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/375/GCA_000355375.2_ASM35537v2	-	2848050
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.387	65.6	-	MMOD01	5	4259	4096	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918570	GCA_001841905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/905/GCA_001841905.1_ASM184190v1	-	M0002684-0
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73147	52	-	CGQI01	41	4889	4537	4/21/15	2/28/17	Contig	SC	SAMEA2156639	GCA_001366355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/355/GCA_001366355.1_10607_2_4	-	A58372
Staphylococcus aureus M1304	1402789	PRJNA220139	220139	Terrabacteria group	Firmicutes	2.87547	32.7	-	JEGX01	73	3028	2887	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360946	GCA_000573525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/525/GCA_000573525.1_Stap_aure_M1304_V1	-	M1304
Staphylococcus aureus M1303	1402788	PRJNA220138	220138	Terrabacteria group	Firmicutes	2.8619	32.8	-	JEGY01	33	3012	2850	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360945	GCA_000573545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/545/GCA_000573545.1_Stap_aure_M1303_V1	-	M1303
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73738	52.1	-	CGLW01	45	4917	4566	4/21/15	2/28/17	Contig	SC	SAMEA2156837	GCA_001366395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/395/GCA_001366395.1_10493_1_29	-	MDUST179
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38955	65.6	-	MMMQ01	11	4261	4101	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918609	GCA_001841945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/945/GCA_001841945.1_ASM184194v1	-	M0010710-3
Escherichia coli 2756500	1116012	PRJNA77259	77259	Proteobacteria	Gammaproteobacteria	5.14688	50.5	-	AQDY01	187	5574	5120	4/6/13	2/24/17	Contig	IGS	SAMN00829251	GCA_000355395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/395/GCA_000355395.2_ASM35539v2	-	2756500
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	1.97283	39.8	-	LIAD01	54	2175	1949	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946353	GCA_001584785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/785/GCA_001584785.1_ASM158478v1	-	MT1
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39996	66.4	-	LDKU01	192	6114	5907	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566265	GCA_001023995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/995/GCA_001023995.1_ASM102399v1	-	Pae_CF67.02r
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.98279	38.9	-	LYFS01	135	3860	3712	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745536	GCA_001863115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/115/GCA_001863115.1_ASM186311v1	-	XH810
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.36217	57.3	-	FLBQ01	36	5301	5084	7/29/16	2/21/17	Scaffold	SC	SAMEA2273724	GCA_900084515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/515/GCA_900084515.1_11983_8_69	-	k1654
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.44128	57.3	-	FLBG01	39	5508	5258	7/29/16	2/21/17	Scaffold	SC	SAMEA2273726	GCA_900084525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/525/GCA_900084525.1_11983_8_71	-	k1657
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.04857	38.9	-	LYFR01	98	3921	3793	11/2/16	4/10/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745537	GCA_001863135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/135/GCA_001863135.1_ASM186313v1	-	XH811
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39976	66.4	-	LDKW01	159	6110	5920	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566267	GCA_001024035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/035/GCA_001024035.1_ASM102403v1	-	Pae_CF67.02t
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.01051	39.6	-	LJKM01	65	2221	2002	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946354	GCA_001584795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/795/GCA_001584795.1_ASM158479v1	-	MT2
Escherichia coli 2845350	1116124	PRJNA77485	77485	Proteobacteria	Gammaproteobacteria	4.96175	50.7	-	AQDS01	171	5436	4849	4/6/13	2/24/17	Contig	IGS	SAMN00829255	GCA_000355415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/415/GCA_000355415.2_ASM35541v2	-	2845350
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39636	65.6	-	MMMU01	3	4260	4101	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918605	GCA_001841965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/965/GCA_001841965.1_ASM184196v1	-	M0022844-6
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93006	51.8	-	CGUK01	50	5124	4751	4/21/15	2/28/17	Contig	SC	SAMEA2157490	GCA_001366555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/555/GCA_001366555.1_10607_1_50	-	2003-011175
Staphylococcus aureus M1302	1402787	PRJNA220137	220137	Terrabacteria group	Firmicutes	2.87065	32.8	-	JEGZ01	37	3022	2859	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360944	GCA_000573565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/565/GCA_000573565.1_Stap_aure_M1302_V1	-	M1302
Staphylococcus aureus M1301	1402786	PRJNA220136	220136	Terrabacteria group	Firmicutes	2.93007	32.9	-	JEHA01	29	3089	2913	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360943	GCA_000573585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/585/GCA_000573585.1_Stap_aure_M1301_V1	-	M1301
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93194	51.8	-	CGQB01	62	5135	4747	4/21/15	2/28/17	Contig	SC	SAMEA2157605	GCA_001366595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/595/GCA_001366595.1_10607_1_90	-	01-2010-000073
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35215	65.6	-	MMNL01	6	4240	4081	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918588	GCA_001841975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/975/GCA_001841975.1_ASM184197v1	-	M0014243-1
Escherichia coli 2845650	1116125	PRJNA77487	77487	Proteobacteria	Gammaproteobacteria	5.20927	50.3	-	AQDR01	119	5444	5009	4/6/13	2/24/17	Contig	IGS	SAMN00829261	GCA_000355435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/435/GCA_000355435.2_ASM35543v2	-	2845650
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.00854	39.6	-	LJMY01	82	2223	2001	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946356	GCA_001584805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/805/GCA_001584805.1_ASM158480v1	-	MT4
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40479	66.4	-	LDLA01	139	6124	5918	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566271	GCA_001024055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/055/GCA_001024055.1_ASM102405v1	-	Pae_CF67.03d
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.95973	39.1	-	LYFQ01	228	3780	3630	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745538	GCA_001863145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/145/GCA_001863145.1_ASM186314v1	-	XH819
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.43853	57.3	-	FLCG01	37	5502	5249	7/29/16	2/21/17	Scaffold	SC	SAMEA2273727	GCA_900084535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/535/GCA_900084535.1_11983_8_72	-	k1658
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.58574	57.2	-	FLCI01	54	5633	5357	7/29/16	2/21/17	Scaffold	SC	SAMEA2273735	GCA_900084545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/545/GCA_900084545.1_11983_8_75	-	k1742
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.95659	39	-	LYFP01	145	3785	3648	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745539	GCA_001863165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/165/GCA_001863165.1_ASM186316v1	-	XH820
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40342	66.4	-	LDLB01	126	6117	5925	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566272	GCA_001024065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/065/GCA_001024065.1_ASM102406v1	-	Pae_CF67.03e
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.00832	39.6	-	LJKP01	67	2209	1995	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946358	GCA_001584815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/815/GCA_001584815.1_ASM158481v1	-	MT6
Escherichia coli 2871950	1116032	PRJNA77299	77299	Proteobacteria	Gammaproteobacteria	5.07283	50.7	-	AQDE01	195	5595	4962	4/6/13	2/24/17	Contig	IGS	SAMN00829282	GCA_000355455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/455/GCA_000355455.2_ASM35545v2	-	2871950
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40839	65.6	-	MMMW01	7	4276	4105	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918603	GCA_001842005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/005/GCA_001842005.1_ASM184200v1	-	M0001398-8
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93268	51.8	-	CGQA01	60	5132	4741	4/21/15	2/28/17	Contig	SC	SAMEA2157620	GCA_001366635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/635/GCA_001366635.1_10607_1_80	-	2012-011302
Staphylococcus aureus M1298	1402783	PRJNA220133	220133	Terrabacteria group	Firmicutes	2.89434	32.9	-	JEHB01	36	3047	2874	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360940	GCA_000573605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/605/GCA_000573605.1_Stap_aure_M1298_V1	-	M1298
Staphylococcus aureus M1297	1402782	PRJNA220132	220132	Terrabacteria group	Firmicutes	2.91795	32.7	-	JEHC01	69	3076	2944	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360939	GCA_000573625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/625/GCA_000573625.1_Stap_aure_M1297_V1	-	M1297
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93098	51.8	-	CGQV01	57	5120	4741	4/21/15	2/28/17	Contig	SC	SAMEA2157677	GCA_001366675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/675/GCA_001366675.1_10607_2_55	-	2008-000234
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38261	65.6	-	MMNI01	5	4256	4097	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918591	GCA_001842015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/015/GCA_001842015.1_ASM184201v1	-	M0018107-4
Escherichia coli 2872000	1116033	PRJNA77301	77301	Proteobacteria	Gammaproteobacteria	5.15409	50.6	-	AQDD01	201	5668	5030	4/6/13	2/24/17	Contig	IGS	SAMN00829284	GCA_000355475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/475/GCA_000355475.2_ASM35547v2	-	2872000
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.00831	39.6	-	LJKQ01	74	2212	1992	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946359	GCA_001584865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/865/GCA_001584865.1_ASM158486v1	-	MT7
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40599	66.4	-	LDLC01	117	6118	5944	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566273	GCA_001024075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/075/GCA_001024075.1_ASM102407v1	-	Pae_CF67.03f
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.891	38.8	-	LYFK01	75	3754	3621	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745544	GCA_001863205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/205/GCA_001863205.1_ASM186320v1	-	XH833
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.54847	57.2	-	FLCH01	49	5573	5307	7/29/16	2/21/17	Scaffold	SC	SAMEA2273737	GCA_900084555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/555/GCA_900084555.1_11983_8_77	-	k1750
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.31541	57.5	-	FLCJ01	56	5324	5076	7/29/16	2/21/17	Scaffold	SC	SAMEA2273740	GCA_900084565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/565/GCA_900084565.1_11983_8_78	-	k1766
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.01662	39	-	LYFI01	149	3881	3733	11/2/16	4/10/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745546	GCA_001863225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/225/GCA_001863225.1_ASM186322v1	-	XH835
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40619	66.4	-	LDLE01	146	6120	5928	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566275	GCA_001024115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/115/GCA_001024115.1_ASM102411v1	-	Pae_CF67.03h
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.00649	39.6	-	LJKR01	75	2208	1998	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946360	GCA_001584875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/875/GCA_001584875.1_ASM158487v1	-	MT8
Escherichia coli BCE001_MS16	1116037	PRJNA77309	77309	Proteobacteria	Gammaproteobacteria	4.99344	50.7	-	AQFK01	21	5168	4837	4/6/13	2/24/17	Contig	IGS	SAMN00829287	GCA_000355495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/495/GCA_000355495.2_ASM35549v2	-	BCE001_MS16
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39586	65.6	-	MMNZ01	1	4271	4114	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918574	GCA_001842045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/045/GCA_001842045.1_ASM184204v1	-	M0003875-3
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93114	51.8	-	CVDZ01	57	5125	4750	4/2/15	2/28/17	Contig	SC	SAMEA2158601	GCA_001366975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/975/GCA_001366975.1_10540_1_44	-	dtc57
Staphylococcus aureus M1296	1402781	PRJNA220131	220131	Terrabacteria group	Firmicutes	2.91415	32.9	-	JEHD01	64	3109	2923	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360938	GCA_000573645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/645/GCA_000573645.1_Stap_aure_M1296_V1	-	M1296
Staphylococcus aureus M1295	1402780	PRJNA220130	220130	Terrabacteria group	Firmicutes	2.89981	32.8	-	JEHE01	51	3079	2911	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360937	GCA_000573665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/665/GCA_000573665.1_Stap_aure_M1295_V1	-	M1295
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93171	51.8	-	CGPV01	56	5129	4751	4/21/15	2/28/17	Contig	SC	SAMEA2158928	GCA_001367075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/075/GCA_001367075.1_10607_1_58	-	2009-008387
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38365	65.6	-	MMMT01	2	4248	4084	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918606	GCA_001842055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/055/GCA_001842055.1_ASM184205v1	-	M0023843-7
Escherichia coli MP021017.1	1116057	PRJNA77349	77349	Proteobacteria	Gammaproteobacteria	5.02112	50.6	-	AQEX01	34	5333	4816	4/6/13	2/24/17	Contig	IGS	SAMN00829304	GCA_000355515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/515/GCA_000355515.2_ASM35551v2	-	MP021017.1
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.00941	39.6	-	LJKT01	171	2208	2004	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946362	GCA_001584885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/885/GCA_001584885.1_ASM158488v1	-	MT10
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40556	66.4	-	LDLF01	130	6112	5935	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566276	GCA_001024125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/125/GCA_001024125.1_ASM102412v1	-	Pae_CF67.03i
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.93742	38.8	-	LYFH01	86	3802	3665	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745547	GCA_001863235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/235/GCA_001863235.1_ASM186323v1	-	XH836
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.33187	57.4	-	FLCK01	55	5369	5141	7/29/16	2/21/17	Scaffold	SC	SAMEA2273742	GCA_900084575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/575/GCA_900084575.1_11983_8_80	-	k1774
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.33103	57.4	-	FLCL01	53	5379	5140	5/19/16	2/21/17	Scaffold	SC	SAMEA2273743	GCA_900084585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/585/GCA_900084585.1_11983_8_81	-	k1777
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.82002	38.9	-	LYFF01	115	3710	3576	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745549	GCA_001863275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/275/GCA_001863275.1_ASM186327v1	-	XH838
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40365	66.4	-	LDLJ01	134	6109	5935	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566280	GCA_001024135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/135/GCA_001024135.1_ASM102413v1	-	Pae_CF67.03m
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.0106	39.7	-	LJKU01	55	2191	1988	3/10/16	3/5/17	Contig	University of Toronto	SAMN03946363	GCA_001584915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/915/GCA_001584915.1_ASM158491v1	-	MT11
Escherichia coli 2762100	1116013	PRJNA77261	77261	Proteobacteria	Gammaproteobacteria	5.16373	50.5	-	AQDX01	198	5665	5010	4/6/13	5/18/17	Contig	IGS	SAMN00829258	GCA_000355535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/535/GCA_000355535.1_ASM35553v1	-	2762100
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40469	65.6	-	MMOC01	9	4285	4095	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918571	GCA_001842085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/085/GCA_001842085.1_ASM184208v1	-	M0003117-0
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93114	51.8	-	CEYL01	56	5126	4752	3/10/15	2/28/17	Contig	SC	SAMEA2158966	GCA_001367095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/095/GCA_001367095.1_10607_1_42	-	2003-013044
Staphylococcus aureus M1293	1402778	PRJNA220128	220128	Terrabacteria group	Firmicutes	2.89009	32.9	-	JEHF01	62	3068	2889	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360935	GCA_000573685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/685/GCA_000573685.1_Stap_aure_M1293_V1	-	M1293
Staphylococcus aureus M1292	1402777	PRJNA220127	220127	Terrabacteria group	Firmicutes	2.81113	32.9	-	JEHG01	42	2897	2725	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360934	GCA_000573705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/705/GCA_000573705.1_Stap_aure_M1292_V1	-	M1292
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93295	51.8	-	CFAA01	56	5134	4750	3/9/15	2/28/17	Contig	SC	SAMEA2159055	GCA_001367155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/155/GCA_001367155.1_10608_2_19	-	2011-024146
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41116	65.6	-	MMMP01	1	4286	4127	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918610	GCA_001842095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/095/GCA_001842095.1_ASM184209v1	-	M0014296-9
Escherichia coli 2780750	1116015	PRJNA77265	77265	Proteobacteria	Gammaproteobacteria	5.23996	50.6	-	AQDV01	129	5496	5089	4/6/13	2/24/17	Contig	IGS	SAMN00829256	GCA_000355555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/555/GCA_000355555.2_ASM35555v2	-	2780750
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.00502	39.6	-	LJKV01	76	2221	2000	3/10/16	3/5/17	Contig	University of Toronto	SAMN03946364	GCA_001584945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/945/GCA_001584945.1_ASM158494v1	-	MT12
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.3978	66.4	-	LDLL01	203	6119	5901	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566282	GCA_001024145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/145/GCA_001024145.1_ASM102414v1	-	Pae_CF67.03o
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.83393	38.8	-	LYFC01	83	3704	3567	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745552	GCA_001863295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/295/GCA_001863295.1_ASM186329v1	-	XH821
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.53643	57.2	-	FLCN01	104	5605	5335	7/29/16	2/21/17	Scaffold	SC	SAMEA2273744	GCA_900084595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/595/GCA_900084595.1_11983_8_82	-	k1780
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.23758	57.5	-	FLCM01	35	5217	5004	5/19/16	2/21/17	Scaffold	SC	SAMEA2273748	GCA_900084605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/605/GCA_900084605.1_11983_8_84	-	k1798
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.08394	39	-	LYEX01	102	3975	3821	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745557	GCA_001863315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/315/GCA_001863315.1_ASM186331v1	-	XH840
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39616	66.4	-	LDLN01	214	6120	5888	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566284	GCA_001024195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/195/GCA_001024195.1_ASM102419v1	-	Pae_CF67.03q
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.01042	39.6	-	LJKW01	67	2213	1996	3/10/16	3/5/17	Contig	University of Toronto	SAMN03946365	GCA_001584965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/965/GCA_001584965.1_ASM158496v1	-	MT13
Escherichia coli 2785200	1116016	PRJNA77267	77267	Proteobacteria	Gammaproteobacteria	5.09458	50.6	-	AQDU01	148	5397	4923	4/6/13	2/24/17	Contig	IGS	SAMN00829254	GCA_000355575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/575/GCA_000355575.2_ASM35557v2	-	2785200
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39495	65.6	-	MMNJ01	11	4267	4093	10/25/16	5/22/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918590	GCA_001842105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/105/GCA_001842105.1_ASM184210v1	-	M0017749-4
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93248	51.8	-	CGPY01	56	5130	4742	4/21/15	2/28/17	Contig	SC	SAMEA2159637	GCA_001367315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/315/GCA_001367315.1_10607_1_84	-	2009-019909
Staphylococcus aureus M1290	1402776	PRJNA220126	220126	Terrabacteria group	Firmicutes	2.82278	32.7	-	JEHH01	61	2969	2840	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360933	GCA_000573725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/725/GCA_000573725.1_Stap_aure_M1290_V1	-	M1290
Staphylococcus aureus M1289	1402775	PRJNA220125	220125	Terrabacteria group	Firmicutes	2.83857	32.7	-	JEHI01	46	2980	2852	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360932	GCA_000573745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/745/GCA_000573745.1_Stap_aure_M1289_V1	-	M1289
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93398	51.8	-	CGQC01	57	5153	4753	4/21/15	2/28/17	Contig	SC	SAMEA2159724	GCA_001367375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/375/GCA_001367375.1_10607_1_81	-	2012-011333
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39774	65.6	-	MMMV01	6	4265	4094	10/25/16	5/22/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918604	GCA_001842135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/135/GCA_001842135.1_ASM184213v1	-	M0006970-9
Escherichia coli 2788150	1116017	PRJNA77269	77269	Proteobacteria	Gammaproteobacteria	5.32806	50.5	-	AQDT01	185	5789	5272	4/6/13	5/18/17	Contig	IGS	SAMN00829259	GCA_000355595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/595/GCA_000355595.1_ASM35559v1	-	2788150
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.00104	39.6	-	LJKY01	199	2190	1997	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946367	GCA_001584975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/975/GCA_001584975.1_ASM158497v1	-	MT15
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40091	66.4	-	LDLO01	185	6105	5918	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566285	GCA_001024205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/205/GCA_001024205.1_ASM102420v1	-	Pae_CF67.03r
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.07167	38.9	-	LYLM01	145	3966	3830	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745386	GCA_001863335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/335/GCA_001863335.1_ASM186333v1	-	XH506
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.62293	57.1	-	FLCO01	80	5688	5398	5/19/16	2/21/17	Scaffold	SC	SAMEA2273749	GCA_900084615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/615/GCA_900084615.1_11983_8_85	-	k1806
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.58653	57	-	FLCP01	42	5534	5290	5/19/16	2/25/17	Scaffold	SC	SAMEA2273753	GCA_900084625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/625/GCA_900084625.1_11983_8_88	-	k1838
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.96646	39	-	LYLK01	189	3831	3687	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745388	GCA_001863345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/345/GCA_001863345.1_ASM186334v1	-	XH508
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40466	66.4	-	LDLR01	144	6121	5923	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566288	GCA_001024215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/215/GCA_001024215.1_ASM102421v1	-	Pae_CF67.04c
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.0093	39.6	-	LJMX01	83	2231	2000	3/10/16	3/5/17	Contig	University of Toronto	SAMN03946368	GCA_001584995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/995/GCA_001584995.1_ASM158499v1	-	MT16
Escherichia coli 2770900	1116014	PRJNA77263	77263	Proteobacteria	Gammaproteobacteria	5.05877	50.6	-	AQDW01	144	5479	5006	4/6/13	2/24/17	Contig	IGS	SAMN00829253	GCA_000355615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/355/615/GCA_000355615.2_ASM35561v2	-	2770900
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41306	65.6	-	MMNE01	3	4286	4116	10/25/16	5/22/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918595	GCA_001842165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/165/GCA_001842165.1_ASM184216v1	-	M0021971-8
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93128	51.8	-	CGOR01	65	5139	4750	4/21/15	2/28/17	Contig	SC	SAMEA2160010	GCA_001367435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/435/GCA_001367435.1_10607_1_79	-	2012-010218
Staphylococcus aureus M1288	1402774	PRJNA220124	220124	Terrabacteria group	Firmicutes	2.86312	32.8	-	JEHJ01	42	3016	2858	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360931	GCA_000573765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/765/GCA_000573765.1_Stap_aure_M1288_V1	-	M1288
Staphylococcus aureus M1285	1402772	PRJNA220122	220122	Terrabacteria group	Firmicutes	2.85804	32.8	-	JEHK01	47	3022	2852	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360929	GCA_000573785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/785/GCA_000573785.1_Stap_aure_M1285_V1	-	M1285
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93335	51.8	-	CFAN01	59	5122	4743	3/13/15	2/28/17	Contig	SC	SAMEA2160171	GCA_001367475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/475/GCA_001367475.1_10608_2_32	-	2012-011284
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39417	65.6	-	MMMS01	2	4263	4098	10/25/16	5/22/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918607	GCA_001842175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/175/GCA_001842175.1_ASM184217v1	-	M0000149-6
Escherichia coli P0301867.4	1116068	PRJNA77371	77371	Proteobacteria	Gammaproteobacteria	5.17569	50.7	-	APYV01	130	5505	5036	4/8/13	2/24/17	Contig	IGS	SAMN00829404	GCA_000356005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/005/GCA_000356005.2_ASM35600v2	-	P0301867.4
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.01232	39.6	-	LJKZ01	70	2216	2004	3/10/16	3/5/17	Contig	University of Toronto	SAMN03946369	GCA_001585025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/025/GCA_001585025.1_ASM158502v1	-	MT17
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39392	66.4	-	LDLU01	208	6110	5891	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566291	GCA_001024235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/235/GCA_001024235.1_ASM102423v1	-	Pae_CF67.04f
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.90037	38.9	-	LYLJ01	113	3777	3636	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745389	GCA_001863395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/395/GCA_001863395.1_ASM186339v1	-	XH509
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.46494	57.2	-	FLCQ01	46	5462	5219	7/29/16	2/21/17	Scaffold	SC	SAMEA2273754	GCA_900084635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/635/GCA_900084635.1_11983_8_89	-	k1842
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.50072	57.3	-	FLCR01	68	5516	5241	7/29/16	2/21/17	Scaffold	SC	SAMEA2273757	GCA_900084645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/645/GCA_900084645.1_11983_8_90	-	k1909
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.25183	38.7	-	LYLL01	453	4078	3914	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745387	GCA_001863405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/405/GCA_001863405.1_ASM186340v1	-	XH507
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40281	66.4	-	LDLZ01	148	6124	5921	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566296	GCA_001024275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/275/GCA_001024275.1_ASM102427v1	-	Pae_CF67.04k
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.01116	39.6	-	LJLB01	68	2216	1991	3/10/16	3/5/17	Contig	University of Toronto	SAMN03946371	GCA_001585045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/045/GCA_001585045.1_ASM158504v1	-	MT19
Escherichia coli P0301867.2	1125641	PRJNA78869	78869	Proteobacteria	Gammaproteobacteria	5.19141	50.7	-	APZU01	147	5563	5044	4/8/13	2/24/17	Contig	IGS	SAMN00858016	GCA_000356025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/025/GCA_000356025.2_ASM35602v2	-	P0301867.2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40431	65.6	-	MMNA01	1	4264	4101	10/25/16	5/22/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918599	GCA_001842195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/195/GCA_001842195.1_ASM184219v1	-	M0024214-0
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9325	51.8	-	CGPT01	58	5119	4746	4/21/15	2/28/17	Contig	SC	SAMEA2160209	GCA_001367495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/495/GCA_001367495.1_10607_1_82	-	2010-011024
Staphylococcus aureus M1283	1402771	PRJNA220121	220121	Terrabacteria group	Firmicutes	2.85702	32.8	-	JEHL01	40	2998	2834	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360928	GCA_000573805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/805/GCA_000573805.1_Stap_aure_M1283_V1	-	M1283
Staphylococcus aureus M1282	1402770	PRJNA220120	220120	Terrabacteria group	Firmicutes	2.94205	32.9	-	JEHM01	32	3112	2936	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360927	GCA_000573825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/825/GCA_000573825.1_Stap_aure_M1282_V1	-	M1282
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72985	52	-	CGPO01	44	4878	4527	4/21/15	2/28/17	Contig	SC	SAMEA2160218	GCA_001367515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/515/GCA_001367515.1_10607_2_22	-	A59204
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40057	65.6	-	MMMR01	4	4274	4107	10/25/16	5/22/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918608	GCA_001842225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/225/GCA_001842225.1_ASM184222v1	-	M0003469-5
Escherichia coli 180050	1116103	PRJNA77441	77441	Proteobacteria	Gammaproteobacteria	4.80856	50.7	-	AQEH01	134	5164	4610	4/8/13	2/24/17	Contig	IGS	SAMN00829233	GCA_000356045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/045/GCA_000356045.2_ASM35604v2	-	180050
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	1.99445	39.7	-	LJMW01	153	2189	1983	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946372	GCA_001585065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/065/GCA_001585065.1_ASM158506v1	-	MT20
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40585	66.4	-	LDMA01	85	6127	5945	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566297	GCA_001024285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/285/GCA_001024285.1_ASM102428v1	-	Pae_CF67.04l
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.14422	38.7	-	LYLG01	300	3924	3763	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745392	GCA_001863415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/415/GCA_001863415.1_ASM186341v1	-	XH512
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.28767	57.5	-	FLCS01	44	5277	5086	5/19/16	2/21/17	Scaffold	SC	SAMEA2273765	GCA_900084655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/655/GCA_900084655.1_11983_8_96	-	k1969
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.58621	57.2	-	FLCT01	89	5644	5375	5/19/16	2/21/17	Scaffold	SC	SAMEA2273516	GCA_900084665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/665/GCA_900084665.1_12045_5_84	-	k30
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.93321	38.9	-	LYLE01	73	3796	3659	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745394	GCA_001863455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/455/GCA_001863455.1_ASM186345v1	-	XH514
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39966	66.4	-	LDMB01	158	6107	5921	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566298	GCA_001024305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/305/GCA_001024305.1_ASM102430v1	-	Pae_CF67.04m
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.00221	39.7	-	LJLC01	66	2223	1985	3/10/16	3/5/17	Contig	University of Toronto	SAMN03946373	GCA_001585075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/075/GCA_001585075.1_ASM158507v1	-	MT21
Escherichia coli 2729250	1116004	PRJNA77243	77243	Proteobacteria	Gammaproteobacteria	5.08217	50.5	-	AQEC01	147	5473	5019	4/8/13	2/24/17	Contig	IGS	SAMN00829239	GCA_000356065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/065/GCA_000356065.2_ASM35606v2	-	2729250
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39342	65.6	-	MMNB01	6	4260	4090	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918598	GCA_001842245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/245/GCA_001842245.1_ASM184224v1	-	M0023039-2
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93322	51.8	-	CGVF01	64	5128	4737	4/21/15	2/28/17	Contig	SC	SAMEA2160624	GCA_001367615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/615/GCA_001367615.1_10608_2_61	-	01-2011-004759
Staphylococcus aureus M1280	1402768	PRJNA220118	220118	Terrabacteria group	Firmicutes	2.88483	32.8	-	JEHN01	64	3066	2901	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360925	GCA_000573845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/845/GCA_000573845.1_Stap_aure_M1280_V1	-	M1280
Staphylococcus aureus M1279	1402767	PRJNA220117	220117	Terrabacteria group	Firmicutes	2.89996	32.8	-	JEHO01	57	3064	2861	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360924	GCA_000573865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/865/GCA_000573865.1_Stap_aure_M1279_V1	-	M1279
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93294	51.8	-	CHGC01	57	5135	4752	4/21/15	2/28/17	Contig	SC	SAMEA2160721	GCA_001367695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/695/GCA_001367695.1_10608_2_42	-	2012-000742
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40335	65.6	-	MMNH01	13	4283	4080	10/25/16	5/22/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918592	GCA_001842255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/255/GCA_001842255.1_ASM184225v1	-	M0018360-9
Escherichia coli 2735000	1116008	PRJNA77251	77251	Proteobacteria	Gammaproteobacteria	4.99137	50.6	-	AQGH01	103	5290	4922	4/8/13	2/24/17	Contig	IGS	SAMN00829252	GCA_000356085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/085/GCA_000356085.2_ASM35608v2	-	2735000
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	1.99024	39.7	-	LJLD01	59	2185	1986	3/10/16	3/5/17	Contig	University of Toronto	SAMN03946374	GCA_001585105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/105/GCA_001585105.1_ASM158510v1	-	MT22
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39638	66.4	-	LDMF01	214	6129	5904	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566302	GCA_001024325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/325/GCA_001024325.1_ASM102432v1	-	Pae_CF67.04q
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.93838	38.8	-	LYLD01	73	3809	3671	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745395	GCA_001863465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/465/GCA_001863465.1_ASM186346v1	-	XH515
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.52389	57.3	-	FLCW01	68	5610	5345	7/29/16	2/21/17	Scaffold	SC	SAMEA2273527	GCA_900084695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/695/GCA_900084695.1_12045_5_94	-	k243
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.57883	57.2	-	FLCY01	97	5638	5366	5/19/16	2/25/17	Scaffold	SC	SAMEA2273528	GCA_900084705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/705/GCA_900084705.1_12045_5_95	-	k248
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.91701	38.9	-	LYLI01	67	3781	3645	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745390	GCA_001863475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/475/GCA_001863475.1_ASM186347v1	-	XH510
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.41068	66.4	-	LDMG01	185	6118	5910	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566303	GCA_001024355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/355/GCA_001024355.1_ASM102435v1	-	Pae_CF67.04r
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.00265	39.7	-	LJLF01	61	2193	1977	3/10/16	3/5/17	Contig	University of Toronto	SAMN03946376	GCA_001585125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/125/GCA_001585125.1_ASM158512v1	-	MT24
Escherichia coli 174900	1116003	PRJNA77241	77241	Proteobacteria	Gammaproteobacteria	4.99979	50.6	-	AQGI01	100	5271	4927	4/8/13	2/24/17	Contig	IGS	SAMN00828913	GCA_000356105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/105/GCA_000356105.2_ASM35610v2	-	174900
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39321	65.6	-	MMMY01	4	4270	4095	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918601	GCA_001842265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/265/GCA_001842265.1_ASM184226v1	-	M0026039-9
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74322	52.1	-	CVLK01	44	4918	4566	4/9/15	2/28/17	Contig	SC	SAMEA2160925	GCA_001367755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/755/GCA_001367755.1_10541_2_12	-	MDUST188
Staphylococcus aureus M1278	1402766	PRJNA220116	220116	Terrabacteria group	Firmicutes	2.81051	32.8	-	JEHP01	47	2922	2722	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360923	GCA_000573885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/885/GCA_000573885.1_Stap_aure_M1278_V1	-	M1278
Staphylococcus aureus M1276	1402765	PRJNA220115	220115	Terrabacteria group	Firmicutes	2.91522	32.8	-	JEHQ01	58	3110	2935	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360922	GCA_000573945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/945/GCA_000573945.1_Stap_aure_M1276_V1	-	M1276
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74145	52.1	-	CGPP01	51	4910	4547	4/21/15	2/28/17	Contig	SC	SAMEA2160982	GCA_001367775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/775/GCA_001367775.1_10607_2_13	-	BHA1P5
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39118	65.6	-	MMNC01	6	4275	4095	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918597	GCA_001842295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/295/GCA_001842295.1_ASM184229v1	-	M0022506-1
Escherichia coli 199900.1	1116130	PRJNA77497	77497	Proteobacteria	Gammaproteobacteria	5.05783	50.7	-	AQEF01	125	5341	4935	4/8/13	5/18/17	Contig	IGS	SAMN00829235	GCA_000356125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/125/GCA_000356125.1_ASM35612v1	-	199900.1
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	1.99436	39.7	-	LJLG01	66	2200	1989	3/10/16	3/5/17	Contig	University of Toronto	SAMN03946377	GCA_001585145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/145/GCA_001585145.1_ASM158514v1	-	MT25
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40563	66.4	-	LDKI01	116	6114	5927	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566253	GCA_001024365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/365/GCA_001024365.1_ASM102436v1	-	Pae_CF67.02f
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.06392	38.8	-	LYLC01	153	3865	3714	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745396	GCA_001863485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/485/GCA_001863485.1_ASM186348v1	-	XH545
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.40334	57.2	-	FLCX01	78	5399	5117	5/19/16	2/25/17	Scaffold	SC	SAMEA2273532	GCA_900084715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/715/GCA_900084715.1_12045_6_2	-	k263
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.44539	57.3	-	FLCZ01	40	5475	5203	5/19/16	2/21/17	Scaffold	SC	SAMEA2273533	GCA_900084725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/725/GCA_900084725.1_12045_6_3	-	k283
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.97648	38.8	-	LYKZ01	88	3864	3719	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745399	GCA_001863535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/535/GCA_001863535.1_ASM186353v1	-	XH548
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.41691	66.4	-	LDKK01	116	6125	5930	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566255	GCA_001024375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/375/GCA_001024375.1_ASM102437v1	-	Pae_CF67.02h
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.00776	39.7	-	LJLH01	73	2222	2004	3/10/16	3/5/17	Contig	University of Toronto	SAMN03946378	GCA_001585155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/155/GCA_001585155.1_ASM158515v1	-	MT26
Escherichia coli 2726950	1116123	PRJNA77483	77483	Proteobacteria	Gammaproteobacteria	4.97075	50.6	-	AQED01	185	5409	4870	4/8/13	2/25/17	Contig	IGS	SAMN00829240	GCA_000356145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/145/GCA_000356145.2_ASM35614v2	-	2726950
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38621	65.6	-	MMNU01	1	4257	4101	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918579	GCA_001842325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/325/GCA_001842325.1_ASM184232v1	-	M0006397-5
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93321	51.8	-	CGQW01	59	5134	4743	4/21/15	2/28/17	Contig	SC	SAMEA2161296	GCA_001367855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/855/GCA_001367855.1_10608_2_28	-	2003-000735
Staphylococcus aureus M1274	1402764	PRJNA220114	220114	Terrabacteria group	Firmicutes	2.85715	32.8	-	JEHR01	42	2996	2822	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360921	GCA_000573965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/965/GCA_000573965.1_Stap_aure_M1274_V1	-	M1274
Staphylococcus aureus M1273	1402763	PRJNA220113	220113	Terrabacteria group	Firmicutes	2.91545	32.9	-	JEHS01	56	3082	2901	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360920	GCA_000573985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/573/985/GCA_000573985.1_Stap_aure_M1273_V1	-	M1273
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71977	52	-	CHLP01	44	4867	4517	4/21/15	2/28/17	Contig	SC	SAMEA2161507	GCA_001367915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/915/GCA_001367915.1_10493_1_6	-	MDUST118
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.33998	65.6	-	MMNT01	4	4240	4082	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918580	GCA_001842345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/345/GCA_001842345.1_ASM184234v1	-	M0008198-5
Escherichia coli P0298942.1	1116141	PRJNA77519	77519	Proteobacteria	Gammaproteobacteria	5.17457	50.6	-	AQET01	67	5550	4995	4/8/13	2/24/17	Contig	IGS	SAMN00829338	GCA_000356165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/165/GCA_000356165.2_ASM35616v2	-	P0298942.1
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.0103	39.7	-	LJLJ01	82	2209	1995	3/10/16	3/5/17	Contig	University of Toronto	SAMN03946380	GCA_001585185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/185/GCA_001585185.1_ASM158518v1	-	MT28
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39053	66.4	-	LDKM01	249	6119	5869	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566257	GCA_001024395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/395/GCA_001024395.1_ASM102439v1	-	Pae_CF67.02j
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.04071	38.9	-	LYKY01	96	3942	3791	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745400	GCA_001863545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/545/GCA_001863545.1_ASM186354v1	-	XH549
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.50563	57	-	FLDA01	80	5626	5341	7/29/16	2/21/17	Scaffold	SC	SAMEA2273534	GCA_900084735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/735/GCA_900084735.1_12045_6_4	-	k296
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.62443	57.1	-	FLDB01	79	5651	5343	7/29/16	2/21/17	Scaffold	SC	SAMEA2273536	GCA_900084745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/745/GCA_900084745.1_12045_6_5	-	k307
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.12934	38.7	-	LYLH01	497	3887	3731	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745391	GCA_001863555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/555/GCA_001863555.1_ASM186355v1	-	XH511
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40195	66.4	-	LDKY01	96	6129	5920	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566269	GCA_001024435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/435/GCA_001024435.1_ASM102443v1	-	Pae_CF67.03b
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.00784	39.6	-	LJLK01	78	2215	2007	3/10/16	3/5/17	Contig	University of Toronto	SAMN03946381	GCA_001585205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/205/GCA_001585205.1_ASM158520v1	-	MT29
Escherichia coli 2722950	1116121	PRJNA77479	77479	Proteobacteria	Gammaproteobacteria	4.93492	50.5	-	AQEE01	156	5308	4740	4/8/13	2/24/17	Contig	IGS	SAMN00829237	GCA_000356185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/185/GCA_000356185.2_ASM35618v2	-	2722950
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39949	65.6	-	MMMX01	6	4269	4099	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918602	GCA_001842355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/355/GCA_001842355.1_ASM184235v1	-	M0000639-6
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81767	51.9	-	CVAV01	40	5002	4644	4/2/15	2/28/17	Contig	SC	SAMEA2161979	GCA_001368075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/075/GCA_001368075.1_10426_1_34	-	ipt43
Staphylococcus aureus M1272	1402762	PRJNA220112	220112	Terrabacteria group	Firmicutes	2.80167	32.8	-	JEHT01	50	2893	2717	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360919	GCA_000574005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/005/GCA_000574005.1_Stap_aure_M1272_V1	-	M1272
Staphylococcus aureus M1271	1402761	PRJNA220111	220111	Terrabacteria group	Firmicutes	2.86332	32.8	-	JEHU01	44	3025	2856	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360918	GCA_000574025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/025/GCA_000574025.1_Stap_aure_M1271_V1	-	M1271
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93249	51.8	-	CGPD01	66	5134	4750	4/21/15	2/28/17	Contig	SC	SAMEA2162187	GCA_001368115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/115/GCA_001368115.1_10607_1_78	-	01-2011-005712
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3866	65.6	-	MMLW01	37	4275	4100	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918536	GCA_001842375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/375/GCA_001842375.1_ASM184237v1	-	I0001342-0
Escherichia coli 2730450	1116006	PRJNA77247	77247	Proteobacteria	Gammaproteobacteria	5.02147	50.5	-	APXE01	221	5562	4874	4/8/13	2/24/17	Contig	IGS	SAMN00829260	GCA_000356205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/205/GCA_000356205.2_ASM35620v2	-	2730450
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	1.99365	39.6	-	LJLM01	87	2159	1980	3/10/16	3/5/17	Contig	University of Toronto	SAMN03946383	GCA_001585225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/225/GCA_001585225.1_ASM158522v1	-	MT31
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40313	66.4	-	LDKT01	162	6118	5924	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566264	GCA_001024445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/445/GCA_001024445.1_ASM102444v1	-	Pae_CF67.02q
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.98497	38.8	-	LYLF01	111	3873	3717	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745393	GCA_001863575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/575/GCA_001863575.1_ASM186357v1	-	XH513
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.20275	57.5	-	FLDC01	34	5180	4953	5/19/16	2/21/17	Scaffold	SC	SAMEA2273537	GCA_900084755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/755/GCA_900084755.1_12045_6_6	-	k320
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.50242	57.4	-	FLDE01	42	5471	5214	5/19/16	2/25/17	Scaffold	SC	SAMEA2273539	GCA_900084765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/765/GCA_900084765.1_12045_6_9	-	k336
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.99692	39	-	LYLB01	98	3881	3738	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745397	GCA_001863615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/615/GCA_001863615.1_ASM186361v1	-	XH546
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.403	66.4	-	LDLD01	177	6116	5924	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566274	GCA_001024455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/455/GCA_001024455.1_ASM102445v1	-	Pae_CF67.03g
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	1.99499	39.7	-	LJMV01	80	2190	1983	3/10/16	3/5/17	Contig	University of Toronto	SAMN03946384	GCA_001585245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/245/GCA_001585245.1_ASM158524v1	-	MT32
Escherichia coli 2741950	1116009	PRJNA77253	77253	Proteobacteria	Gammaproteobacteria	4.96243	50.5	-	APXF01	208	5468	4817	4/8/13	2/24/17	Contig	IGS	SAMN00829257	GCA_000356225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/225/GCA_000356225.2_ASM35622v2	-	2741950
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38649	65.6	-	MMLT01	73	4302	4101	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918539	GCA_001842405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/405/GCA_001842405.1_ASM184240v1	-	C0004788-7
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.87216	51.9	-	CHLT01	49	5076	4707	4/21/15	2/28/17	Contig	SC	SAMEA2162708	GCA_001368255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/255/GCA_001368255.1_10540_1_2	-	3592/3
Staphylococcus aureus M1270	1402760	PRJNA220110	220110	Terrabacteria group	Firmicutes	2.91345	32.7	-	JEHV01	64	3085	2935	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360917	GCA_000574045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/045/GCA_000574045.1_Stap_aure_M1270_V1	-	M1270
Staphylococcus aureus M1269	1402759	PRJNA220109	220109	Terrabacteria group	Firmicutes	2.86074	32.8	-	JEHW01	51	3023	2856	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360916	GCA_000574065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/065/GCA_000574065.1_Stap_aure_M1269_V1	-	M1269
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB4240	222606	Proteobacteria	Gammaproteobacteria	4.71801	52.1	-	CGMD01	42	4876	4520	4/21/15	2/28/17	Contig	SC	SAMEA2142371	GCA_001368635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/635/GCA_001368635.1_10541_1_64	-	ST1921/06
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40384	65.6	-	MMLL01	24	4292	4110	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918547	GCA_001842445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/445/GCA_001842445.1_ASM184244v1	-	00-R1360
Escherichia coli 2875150	1116036	PRJNA77307	77307	Proteobacteria	Gammaproteobacteria	5.14895	50.6	-	APXK01	276	5817	4983	4/8/13	5/18/17	Contig	IGS	SAMN00829286	GCA_000356245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/245/GCA_000356245.1_ASM35624v1	-	2875150
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.00563	39.7	-	LJLN01	74	2210	1999	3/10/16	3/5/17	Contig	University of Toronto	SAMN03946386	GCA_001585265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/265/GCA_001585265.1_ASM158526v1	-	MT34
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40407	66.4	-	LDLH01	150	6121	5922	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566278	GCA_001024495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/495/GCA_001024495.1_ASM102449v1	-	Pae_CF67.03k
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.97628	38.8	-	LYLA01	87	3864	3722	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745398	GCA_001863625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/625/GCA_001863625.1_ASM186362v1	-	XH547
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.32303	57.7	-	FLDD01	19	5269	5039	5/19/16	2/21/17	Scaffold	SC	SAMEA2273545	GCA_900084775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/775/GCA_900084775.1_12045_6_13	-	k379
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.41633	57.3	-	FLDF01	31	5419	5161	5/19/16	2/21/17	Scaffold	SC	SAMEA2273549	GCA_900084785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/785/GCA_900084785.1_12045_6_17	-	k407
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.97462	38.9	-	LYKV01	89	3846	3706	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745403	GCA_001863665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/665/GCA_001863665.1_ASM186366v1	-	XH552
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40561	66.4	-	LDLI01	102	6124	5944	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566279	GCA_001024515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/515/GCA_001024515.1_ASM102451v1	-	Pae_CF67.03l
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.0058	39.6	-	LJLO01	76	2204	1993	3/10/16	3/5/17	Contig	University of Toronto	SAMN03946387	GCA_001585285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/285/GCA_001585285.1_ASM158528v1	-	MT35
Escherichia coli BCE008_MS-01	1116110	PRJNA77455	77455	Proteobacteria	Gammaproteobacteria	4.90457	51	-	APXL01	573	5324	4746	4/8/13	2/24/17	Contig	IGS	SAMN00829289	GCA_000356265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/265/GCA_000356265.2_ASM35626v2	-	BCE008_MS-01
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36932	65.6	-	MMMB01	29	4272	4090	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918531	GCA_001842455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/455/GCA_001842455.1_ASM184245v1	-	I0000969-1
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB4240	222606	Proteobacteria	Gammaproteobacteria	4.77473	52	-	CIBJ01	55	4948	4593	4/21/15	2/28/17	Contig	SC	SAMEA2142538	GCA_001368655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/655/GCA_001368655.1_10541_1_71	-	ST472/01
Staphylococcus aureus M1268	1402758	PRJNA220108	220108	Terrabacteria group	Firmicutes	2.84978	32.9	-	JEHX01	43	2990	2831	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360915	GCA_000574085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/085/GCA_000574085.1_Stap_aure_M1268_V1	-	M1268
Staphylococcus aureus M1267	1402757	PRJNA220107	220107	Terrabacteria group	Firmicutes	2.91202	32.8	-	JEHY01	67	3102	2920	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360914	GCA_000574105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/105/GCA_000574105.1_Stap_aure_M1267_V1	-	M1267
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB4240	222606	Proteobacteria	Gammaproteobacteria	4.74446	52	-	CGLY01	42	4906	4546	4/21/15	2/28/17	Contig	SC	SAMEA2148950	GCA_001368675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/675/GCA_001368675.1_10541_1_74	-	ST821/98
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38377	65.6	-	MMLS01	1	4258	4098	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918540	GCA_001842485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/485/GCA_001842485.1_ASM184248v1	-	I0003088-7
Escherichia coli BCE011_MS-01	1116114	PRJNA77465	77465	Proteobacteria	Gammaproteobacteria	4.91871	50.6	-	APXM01	317	5314	4711	4/8/13	2/24/17	Contig	IGS	SAMN00829292	GCA_000356285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/285/GCA_000356285.2_ASM35628v2	-	BCE011_MS-01
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.00778	39.7	-	LJLR01	185	2199	1994	3/10/16	3/5/17	Contig	University of Toronto	SAMN03946390	GCA_001585305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/305/GCA_001585305.1_ASM158530v1	-	MT38
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40334	66.4	-	LDLP01	120	6119	5925	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566286	GCA_001024535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/535/GCA_001024535.1_ASM102453v1	-	Pae_CF67.04a
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.12599	38.7	-	LYKT01	406	3927	3769	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745405	GCA_001863695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/695/GCA_001863695.1_ASM186369v1	-	XH554
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.81264	57.1	-	FLDI01	84	5808	5482	5/19/16	2/21/17	Scaffold	SC	SAMEA2273546	GCA_900084795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/795/GCA_900084795.1_12045_6_14	-	k385
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.57581	57.1	-	FLDH01	52	5613	5336	5/19/16	2/21/17	Scaffold	SC	SAMEA2273552	GCA_900084805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/805/GCA_900084805.1_12045_6_20	-	k446
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.09596	38.4	-	LYKQ01	121	4013	3828	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745408	GCA_001863705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/705/GCA_001863705.1_ASM186370v1	-	XH639
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40376	66.4	-	LDLQ01	138	6117	5921	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566287	GCA_001024545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/545/GCA_001024545.1_ASM102454v1	-	Pae_CF67.04b
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	1.98821	39.7	-	LJMS01	73	2191	1962	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946393	GCA_001585335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/335/GCA_001585335.1_ASM158533v1	-	CLG2
Escherichia coli 180200	1116104	PRJNA77443	77443	Proteobacteria	Gammaproteobacteria	5.02369	50.7	-	APXC01	328	5377	4921	4/8/13	2/24/17	Contig	IGS	SAMN00829232	GCA_000356305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/305/GCA_000356305.2_ASM35630v2	-	180200
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40382	65.6	-	MMLJ01	17	4291	4117	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918549	GCA_001842515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/515/GCA_001842515.1_ASM184251v1	-	01-R0159
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB4240	222606	Proteobacteria	Gammaproteobacteria	4.71699	52.1	-	CHFZ01	46	4876	4520	4/21/15	2/28/17	Contig	SC	SAMEA2152561	GCA_001368695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/695/GCA_001368695.1_10541_1_58	-	ST1197/88
Staphylococcus aureus M1264	1402755	PRJNA220105	220105	Terrabacteria group	Firmicutes	2.91179	32.9	-	JEHZ01	59	3067	2872	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360912	GCA_000574125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/125/GCA_000574125.1_Stap_aure_M1264_V1	-	M1264
Staphylococcus aureus M1263	1402754	PRJNA220104	220104	Terrabacteria group	Firmicutes	2.9196	32.7	-	JEIA01	68	3102	2956	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360911	GCA_000574145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/145/GCA_000574145.1_Stap_aure_M1263_V1	-	M1263
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.0019	52.1	-	CZMG01	60	5116	4825	10/21/15	2/28/17	Contig	SC	SAMEA2336259	GCA_001409215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/215/GCA_001409215.1_12227_3_8	-	2511STDY5712412
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40141	65.6	-	MMMA01	14	4287	4091	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918532	GCA_001842525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/525/GCA_001842525.1_ASM184252v1	-	I0001404-8
Escherichia coli 2730350	1116005	PRJNA77245	77245	Proteobacteria	Gammaproteobacteria	4.80802	50.7	-	APXD01	270	5092	4622	4/8/13	2/24/17	Contig	IGS	SAMN00829262	GCA_000356325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/325/GCA_000356325.2_ASM35632v2	-	2730350
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	1.98898	39.7	-	LJLT01	63	2177	1958	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946394	GCA_001585355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/355/GCA_001585355.1_ASM158535v1	-	CLG3
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39462	66.4	-	LDLT01	165	6156	5879	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566290	GCA_001024565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/565/GCA_001024565.1_ASM102456v1	-	Pae_CF67.04e
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.11347	38.7	-	LYKU01	276	3901	3745	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745404	GCA_001863725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/725/GCA_001863725.1_ASM186372v1	-	XH553
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.50953	56.9	-	FLDG01	48	5473	5242	5/19/16	2/21/17	Scaffold	SC	SAMEA2273557	GCA_900084815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/815/GCA_900084815.1_12045_6_25	-	k479
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.61231	56.9	-	FLDJ01	71	5670	5384	5/19/16	2/21/17	Scaffold	SC	SAMEA2273563	GCA_900084825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/825/GCA_900084825.1_12045_6_32	-	k518
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.96074	39	-	LYKM01	93	3845	3702	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745412	GCA_001863775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/775/GCA_001863775.1_ASM186377v1	-	XH643
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39909	66.4	-	LDLW01	213	6128	5902	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566293	GCA_001024585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/585/GCA_001024585.1_ASM102458v1	-	Pae_CF67.04h
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	1.98797	39.7	-	LJLU01	59	2182	1955	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946395	GCA_001585385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/385/GCA_001585385.1_ASM158538v1	-	CLG4
Escherichia coli 178900	1116108	PRJNA77451	77451	Proteobacteria	Gammaproteobacteria	5.11179	51.1	-	APXA01	354	5488	4960	4/8/13	2/24/17	Contig	IGS	SAMN00829227	GCA_000356345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/345/GCA_000356345.2_ASM35634v2	-	178900
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3964	65.6	-	MMLU01	4	4272	4112	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918538	GCA_001842565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/565/GCA_001842565.1_ASM184256v1	-	C0003814-2
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.96522	52.1	-	CZPN01	48	5066	4764	10/21/15	2/28/17	Contig	SC	SAMEA2336281	GCA_001409235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/235/GCA_001409235.1_12227_3_30	-	2511STDY5712434
Staphylococcus aureus M1262	1402753	PRJNA220103	220103	Terrabacteria group	Firmicutes	2.90135	32.8	-	JEIB01	71	3074	2935	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360910	GCA_000574165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/165/GCA_000574165.1_Stap_aure_M1262_V1	-	M1262
Staphylococcus aureus M1261	1402752	PRJNA220102	220102	Terrabacteria group	Firmicutes	2.8675	32.8	-	JEIC01	41	3020	2862	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360909	GCA_000574185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/185/GCA_000574185.1_Stap_aure_M1261_V1	-	M1261
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.9626	52.1	-	CZOB01	50	5064	4763	10/21/15	2/28/17	Contig	SC	SAMEA2336252	GCA_001409255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/255/GCA_001409255.1_12227_3_1	-	2511STDY5712405
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41116	65.6	-	MMLM01	40	4299	4097	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918546	GCA_001842605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/605/GCA_001842605.1_ASM184260v1	-	00-R1244
Escherichia coli 179550	1116109	PRJNA77453	77453	Proteobacteria	Gammaproteobacteria	5.03985	50.9	-	APXB01	384	5417	4949	4/8/13	2/24/17	Contig	IGS	SAMN00829229	GCA_000356365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/365/GCA_000356365.2_ASM35636v2	-	179550
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	1.97789	39.8	-	LJMR01	96	2174	1934	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946396	GCA_001585405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/405/GCA_001585405.1_ASM158540v1	-	CLG5
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40407	66.4	-	LDLX01	147	6118	5918	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566294	GCA_001024615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/615/GCA_001024615.1_ASM102461v1	-	Pae_CF67.04i
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.8819	38.9	-	LYKK01	49	3732	3528	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745414	GCA_001863785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/785/GCA_001863785.1_ASM186378v1	-	XH645
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.68149	57	-	FLDK01	47	5689	5429	5/19/16	2/21/17	Scaffold	SC	SAMEA2273558	GCA_900084835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/835/GCA_900084835.1_12045_6_26	-	k480
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.0911	58.2	-	FLDN01	16	5010	4790	5/19/16	2/21/17	Scaffold	SC	SAMEA2273559	GCA_900084845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/845/GCA_900084845.1_12045_6_27	-	k482
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.97439	38.9	-	LYKG01	54	3840	3715	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745418	GCA_001863815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/815/GCA_001863815.1_ASM186381v1	-	XH649
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40822	66.4	-	LDMC01	79	6118	5948	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566299	GCA_001024635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/635/GCA_001024635.1_ASM102463v1	-	Pae_CF67.04n
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	1.99037	39.7	-	LJLV01	80	2175	1977	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946398	GCA_001585425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/425/GCA_001585425.1_ASM158542v1	-	CLG7
Escherichia coli BCE030_MS-09	1116116	PRJNA77469	77469	Proteobacteria	Gammaproteobacteria	5.12157	50.4	-	APXN01	252	5692	4968	4/8/13	5/18/17	Contig	IGS	SAMN00829296	GCA_000356385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/385/GCA_000356385.1_ASM35638v1	-	BCE030_MS-09
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39659	65.6	-	MMLO01	19	4283	4097	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918544	GCA_001842665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/665/GCA_001842665.1_ASM184266v1	-	00-R0139
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.89508	52.1	-	CZOU01	72	5025	4707	10/21/15	2/28/17	Contig	SC	SAMEA2336242	GCA_001409275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/275/GCA_001409275.1_12216_4_53	-	2511STDY5712395
Staphylococcus aureus M1260	1402751	PRJNA220101	220101	Terrabacteria group	Firmicutes	2.80036	32.8	-	JEID01	55	2932	2739	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360908	GCA_000574205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/205/GCA_000574205.1_Stap_aure_M1260_V1	-	M1260
Staphylococcus aureus M1258	1402749	PRJNA220099	220099	Terrabacteria group	Firmicutes	2.86458	32.8	-	JEIE01	48	3023	2850	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360906	GCA_000574225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/225/GCA_000574225.1_Stap_aure_M1258_V1	-	M1258
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.01016	52.1	-	CZNE01	73	5130	4825	10/21/15	2/28/17	Contig	SC	SAMEA1904405	GCA_001409295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/295/GCA_001409295.1_9472_3_30	-	2511STDY5462415
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3851	65.6	-	MMMC01	10	4265	4098	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918530	GCA_001842675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/675/GCA_001842675.1_ASM184267v1	-	I0001382-6
Escherichia coli BCE032_MS-12	1116117	PRJNA77471	77471	Proteobacteria	Gammaproteobacteria	5.12113	50.4	-	APXO01	188	5568	4926	4/8/13	2/24/17	Contig	IGS	SAMN00829293	GCA_000356405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/405/GCA_000356405.2_ASM35640v2	-	BCE032_MS-12
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.0228	39.7	-	LJLW01	77	2232	2034	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946399	GCA_001585435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/435/GCA_001585435.1_ASM158543v1	-	CLG8
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40036	66.4	-	LDMD01	134	6115	5922	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566300	GCA_001024645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/645/GCA_001024645.1_ASM102464v1	-	Pae_CF67.04o
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.9852	38.8	-	LYJZ01	48	3793	3660	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745425	GCA_001863835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/835/GCA_001863835.1_ASM186383v1	-	XH664
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.5841	57.2	-	FLDM01	63	5704	5446	5/19/16	2/21/17	Scaffold	SC	SAMEA2273571	GCA_900084855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/855/GCA_900084855.1_12045_6_39	-	k557
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.5135	57.2	-	FLDP01	100	5575	5259	5/19/16	2/25/17	Scaffold	SC	SAMEA2273574	GCA_900084865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/865/GCA_900084865.1_12045_6_42	-	k593
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.05369	39	-	LYJS01	78	3946	3808	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745432	GCA_001863855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/855/GCA_001863855.1_ASM186385v1	-	XH671
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40147	66.4	-	LDMH01	169	6114	5921	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566304	GCA_001024655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/655/GCA_001024655.1_ASM102465v1	-	Pae_CF67.04s
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.00144	39.6	-	LJLX01	66	2187	1997	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946400	GCA_001585465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/465/GCA_001585465.1_ASM158546v1	-	CLG9
Escherichia coli MP021561.3	1116137	PRJNA77511	77511	Proteobacteria	Gammaproteobacteria	5.30718	50.4	-	APXP01	212	5725	5244	4/8/13	2/25/17	Contig	IGS	SAMN00829336	GCA_000356425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/425/GCA_000356425.2_ASM35642v2	-	MP021561.3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39952	65.6	-	MMLP01	38	4296	4090	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918543	GCA_001842745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/745/GCA_001842745.1_ASM184274v1	-	00-R0086
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.07279	52.1	-	CZPF01	52	5188	4872	10/21/15	2/28/17	Contig	SC	SAMEA2336244	GCA_001409315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/315/GCA_001409315.1_12216_4_55	-	2511STDY5712397
Staphylococcus aureus M1254	1402748	PRJNA220098	220098	Terrabacteria group	Firmicutes	2.84383	32.8	-	JEIF01	34	2991	2823	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360905	GCA_000574245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/245/GCA_000574245.1_Stap_aure_M1254_V1	-	M1254
Staphylococcus aureus M1252	1402747	PRJNA220097	220097	Terrabacteria group	Firmicutes	2.84702	32.8	-	JEIG01	40	3001	2839	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360904	GCA_000574265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/265/GCA_000574265.1_Stap_aure_M1252_V1	-	M1252
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.0589	52.1	-	CZLY01	74	5203	4898	10/21/15	2/28/17	Contig	SC	SAMEA1904388	GCA_001409335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/335/GCA_001409335.1_9472_3_16	-	2511STDY5462401
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41184	65.6	-	MMMF01	17	4296	4113	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918527	GCA_001842765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/765/GCA_001842765.1_ASM184276v1	-	I0000559-0
Escherichia coli 2860650	1116022	PRJNA77279	77279	Proteobacteria	Gammaproteobacteria	5.13361	50.5	-	APXG01	174	5533	5091	4/8/13	2/24/17	Contig	IGS	SAMN00829275	GCA_000356445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/445/GCA_000356445.2_ASM35644v2	-	2860650
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.00777	39.7	-	LJMP01	153	2187	1976	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946403	GCA_001585505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/505/GCA_001585505.1_ASM158550v1	-	AK133
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40447	66.4	-	LDMI01	147	6123	5927	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566305	GCA_001024695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/695/GCA_001024695.1_ASM102469v1	-	Pae_CF67.04t
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.92016	38.9	-	LYJW01	97	3812	3668	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745428	GCA_001863865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/865/GCA_001863865.1_ASM186386v1	-	XH667
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.08446	58.1	-	FLDL01	15	5009	4793	5/19/16	2/21/17	Scaffold	SC	SAMEA2273570	GCA_900084875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/875/GCA_900084875.1_12045_6_38	-	k553
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.48667	57.1	-	FLDO01	60	5521	5266	5/19/16	2/21/17	Scaffold	SC	SAMEA2273569	GCA_900084885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/885/GCA_900084885.1_12045_6_37	-	k548
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.25579	39.1	-	LYJO01	491	4061	3885	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745436	GCA_001863875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/875/GCA_001863875.1_ASM186387v1	-	XH608
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39695	66.4	-	LDMJ01	184	6114	5906	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566306	GCA_001024715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/715/GCA_001024715.1_ASM102471v1	-	Pae_CF67.05a
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.00043	39.7	-	LJMO01	193	2184	1959	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946404	GCA_001585515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/515/GCA_001585515.1_ASM158551v1	-	AK134
Escherichia coli 2862600	1116024	PRJNA77283	77283	Proteobacteria	Gammaproteobacteria	4.98701	50.7	-	APXH01	158	5393	4843	4/8/13	2/25/17	Contig	IGS	SAMN00829272	GCA_000356465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/465/GCA_000356465.2_ASM35646v2	-	2862600
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39395	65.6	-	MMMH01	1	4263	4102	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918525	GCA_001842775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/775/GCA_001842775.1_ASM184277v1	-	I0005760-9
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.04271	52.1	-	CZOG01	76	5172	4861	10/21/15	2/28/17	Contig	SC	SAMEA2336266	GCA_001409355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/355/GCA_001409355.1_12227_3_15	-	2511STDY5712419
Staphylococcus aureus M1250	1402745	PRJNA220095	220095	Terrabacteria group	Firmicutes	2.84592	32.8	-	JEIH01	31	3000	2845	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360902	GCA_000574285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/285/GCA_000574285.1_Stap_aure_M1250_V1	-	M1250
Staphylococcus aureus M1249	1402744	PRJNA220094	220094	Terrabacteria group	Firmicutes	2.87059	32.9	-	JEII01	37	3021	2852	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360901	GCA_000574305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/305/GCA_000574305.1_Stap_aure_M1249_V1	-	M1249
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.94443	52.1	-	CZPA01	57	5035	4741	10/21/15	2/28/17	Contig	SC	SAMEA2336274	GCA_001409375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/375/GCA_001409375.1_12227_3_23	-	2511STDY5712427
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39844	65.6	-	MMLF01	10	4267	4094	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918553	GCA_001842785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/785/GCA_001842785.1_ASM184278v1	-	02-R0220
Escherichia coli 2864350	1116025	PRJNA77285	77285	Proteobacteria	Gammaproteobacteria	5.21702	50.4	-	APXI01	120	5542	5158	4/8/13	2/24/17	Contig	IGS	SAMN00829273	GCA_000356485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/485/GCA_000356485.2_ASM35648v2	-	2864350
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	1.98184	39.8	-	LJMA01	61	2175	1968	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946405	GCA_001585545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/545/GCA_001585545.1_ASM158554v1	-	AK135
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.41084	66.4	-	LDMK01	145	6121	5938	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566307	GCA_001024725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/725/GCA_001024725.1_ASM102472v1	-	Pae_CF67.05b
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.90891	38.8	-	LYJJ01	85	3781	3640	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745441	GCA_001863905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/905/GCA_001863905.1_ASM186390v1	-	XH680
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.32522	57.8	-	FLDQ01	50	5301	5032	5/19/16	2/21/17	Scaffold	SC	SAMEA2273581	GCA_900084895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/895/GCA_900084895.1_12045_6_49	-	k644
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.5557	57.1	-	FLDR01	63	5609	5329	5/19/16	2/21/17	Scaffold	SC	SAMEA2273576	GCA_900084905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/905/GCA_900084905.1_12045_6_45	-	k616
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.94384	38.8	-	LYJH01	66	3809	3679	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745443	GCA_001863935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/935/GCA_001863935.1_ASM186393v1	-	XH682
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39476	66.4	-	LDML01	166	6111	5910	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566308	GCA_001024755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/755/GCA_001024755.1_ASM102475v1	-	Pae_CF67.05c
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	1.98363	39.7	-	LJMN01	168	2164	1962	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946406	GCA_001585565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/565/GCA_001585565.1_ASM158556v1	-	AK136
Escherichia coli 2866350	1116027	PRJNA77289	77289	Proteobacteria	Gammaproteobacteria	5.05101	50.4	-	APXJ01	135	5420	5007	4/8/13	2/25/17	Contig	IGS	SAMN00829277	GCA_000356505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/505/GCA_000356505.2_ASM35650v2	-	2866350
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38267	65.6	-	MMLG01	22	4272	4097	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918552	GCA_001842845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/845/GCA_001842845.1_ASM184284v1	-	01-R0903
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.02916	52.1	-	CZMO01	74	5153	4823	10/21/15	2/28/17	Contig	SC	SAMEA1904390	GCA_001409395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/395/GCA_001409395.1_9472_3_17	-	2511STDY5462402
Staphylococcus aureus M1247	1402743	PRJNA220093	220093	Terrabacteria group	Firmicutes	2.82353	32.8	-	JEIJ01	29	2978	2813	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360900	GCA_000574325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/325/GCA_000574325.1_Stap_aure_M1247_V1	-	M1247
Staphylococcus aureus M1246	1402742	PRJNA220092	220092	Terrabacteria group	Firmicutes	2.88277	32.9	-	JEIK01	39	3030	2854	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360899	GCA_000574345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/345/GCA_000574345.1_Stap_aure_M1246_V1	-	M1246
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.86852	52.2	-	CZNX01	71	4960	4665	10/21/15	2/28/17	Contig	SC	SAMEA2336229	GCA_001409415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/415/GCA_001409415.1_12216_4_40	-	2511STDY5712382
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41197	65.6	-	MMLD01	15	4279	4105	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918555	GCA_001842875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/875/GCA_001842875.1_ASM184287v1	-	03-R0395
Escherichia coli P0298942.10	1116147	PRJNA77531	77531	Proteobacteria	Gammaproteobacteria	5.08443	50.5	-	APXQ01	173	5518	4948	4/8/13	2/24/17	Contig	IGS	SAMN00829340	GCA_000356525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/525/GCA_000356525.2_ASM35652v2	-	P0298942.10
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.00377	39.7	-	LJMC01	67	2194	1990	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946408	GCA_001585585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/585/GCA_001585585.1_ASM158558v1	-	MD647
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40214	66.4	-	LDMM01	171	6112	5913	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566309	GCA_001024765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/765/GCA_001024765.1_ASM102476v1	-	Pae_CF67.05d
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.11963	38.9	-	LYIP01	92	4028	3884	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745461	GCA_001863955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/955/GCA_001863955.1_ASM186395v1	-	XH706
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.30022	57.4	-	FLDS01	19	5214	5019	5/19/16	2/21/17	Scaffold	SC	SAMEA2273582	GCA_900084915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/915/GCA_900084915.1_12045_6_50	-	k657
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.49885	57.3	-	FLDU01	54	5535	5252	5/19/16	2/25/17	Scaffold	SC	SAMEA2273584	GCA_900084935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/935/GCA_900084935.1_12045_6_52	-	k699
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.94211	39	-	LYIO01	54	3802	3662	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745462	GCA_001863965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/965/GCA_001863965.1_ASM186396v1	-	XH707
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40073	66.4	-	LDMN01	149	6113	5923	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566310	GCA_001024775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/775/GCA_001024775.1_ASM102477v1	-	Pae_CF67.05e
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	1.99181	39.7	-	LJME01	62	2192	1979	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946410	GCA_001585595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/595/GCA_001585595.1_ASM158559v1	-	TX640
Escherichia coli P0302293.2	1116073	PRJNA77381	77381	Proteobacteria	Gammaproteobacteria	5.16535	50.7	-	AQEP01	37	5462	5073	4/8/13	5/18/17	Contig	IGS	SAMN00829411	GCA_000356545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/545/GCA_000356545.1_ASM35654v1	-	P0302293.2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39225	65.6	-	MMLC01	23	4280	4084	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918556	GCA_001842895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/895/GCA_001842895.1_ASM184289v1	-	99-R455
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.06655	52.1	-	CZLU01	74	5204	4895	10/21/15	2/28/17	Contig	SC	SAMEA1904384	GCA_001409435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/435/GCA_001409435.1_9472_3_14	-	2511STDY5462399
Staphylococcus aureus M1245	1402741	PRJNA220091	220091	Terrabacteria group	Firmicutes	2.85733	32.8	-	JEIL01	49	3021	2859	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360898	GCA_000574365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/365/GCA_000574365.1_Stap_aure_M1245_V1	-	M1245
Staphylococcus aureus M1243	1402740	PRJNA220090	220090	Terrabacteria group	Firmicutes	2.9597	33	-	JEIM01	73	3147	2941	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360897	GCA_000574385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/385/GCA_000574385.1_Stap_aure_M1243_V1	-	M1243
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.13337	52.1	-	CZMP01	83	5266	4942	10/21/15	2/28/17	Contig	SC	SAMEA2336304	GCA_001409455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/455/GCA_001409455.1_12227_3_53	-	2511STDY5712457
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40188	65.6	-	MMKZ01	23	4297	4105	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918559	GCA_001842955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/955/GCA_001842955.1_ASM184295v1	-	99-R855
Escherichia coli P0304816.1	1116177	PRJNA77591	77591	Proteobacteria	Gammaproteobacteria	5.40667	50.5	-	AQEM01	57	5724	5221	4/8/13	2/22/17	Contig	IGS	SAMN00829503	GCA_000356565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/565/GCA_000356565.1_ASM35656v1	-	P0304816.1
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	1.99262	39.7	-	LJMM01	74	2197	1975	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946411	GCA_001585625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/625/GCA_001585625.1_ASM158562v1	-	TX645
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40114	66.4	-	LDMO01	172	6104	5916	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566311	GCA_001024805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/805/GCA_001024805.1_ASM102480v1	-	Pae_CF67.05f
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.58948	38.9	-	LYIZ01	96	3456	3338	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745451	GCA_001863975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/975/GCA_001863975.1_ASM186397v1	-	XH690
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.27239	57.5	-	FLDV01	18	5228	5024	5/19/16	2/21/17	Scaffold	SC	SAMEA2273585	GCA_900084945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/945/GCA_900084945.1_12045_6_53	-	k702
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.35965	57.4	-	FLDW01	56	5404	5142	5/19/16	2/21/17	Scaffold	SC	SAMEA2273587	GCA_900084955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/955/GCA_900084955.1_12045_6_54	-	k763
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.05581	38.8	-	LYKX01	94	3975	3809	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745401	GCA_001864015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/015/GCA_001864015.1_ASM186401v1	-	XH550
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40133	66.4	-	LDMP01	161	6119	5928	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566312	GCA_001024835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/835/GCA_001024835.1_ASM102483v1	-	Pae_CF67.05g
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.038	39.7	-	LJMG01	194	2238	2037	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946413	GCA_001585635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/635/GCA_001585635.1_ASM158563v1	-	SN2206
Escherichia coli P0305260.1	1125644	PRJNA78875	78875	Proteobacteria	Gammaproteobacteria	4.86983	50.9	-	AQEL01	25	5097	4667	4/8/13	2/24/17	Contig	IGS	SAMN00855354	GCA_000356585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/585/GCA_000356585.2_ASM35658v2	-	P0305260.1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34369	65.6	-	MMKY01	17	4250	4072	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918560	GCA_001842985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/985/GCA_001842985.1_ASM184298v1	-	99-R873
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.92653	52.2	-	CZMS01	53	5001	4704	10/21/15	2/28/17	Contig	SC	SAMEA2336299	GCA_001409475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/475/GCA_001409475.1_12227_3_48	-	2511STDY5712452
Staphylococcus aureus M1242	1402739	PRJNA220089	220089	Terrabacteria group	Firmicutes	2.74459	32.7	-	JEIN01	43	2824	2668	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360896	GCA_000574405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/405/GCA_000574405.1_Stap_aure_M1242_V1	-	M1242
Staphylococcus aureus M1241	1402738	PRJNA220088	220088	Terrabacteria group	Firmicutes	2.88414	32.8	-	JEIO01	45	3041	2873	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360895	GCA_000574425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/425/GCA_000574425.1_Stap_aure_M1241_V1	-	M1241
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.15186	52.1	-	CZOA01	80	5268	4975	10/21/15	2/28/17	Contig	SC	SAMEA2152248	GCA_001409495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/495/GCA_001409495.1_10900_1_31	-	2511STDY5564065
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40536	65.6	-	MMKX01	4	4276	4123	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918561	GCA_001843005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/005/GCA_001843005.1_ASM184300v1	-	99-R890
Escherichia coli p0305293.1	1116089	PRJNA77413	77413	Proteobacteria	Gammaproteobacteria	5.23466	50.6	-	AQEK01	44	5589	5134	4/8/13	2/24/17	Contig	IGS	SAMN00829535	GCA_000356605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/605/GCA_000356605.2_ASM35660v2	-	p0305293.1
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	1.98472	39.7	-	LJMI01	56	2181	1975	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946415	GCA_001585665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/665/GCA_001585665.1_ASM158566v1	-	CO697
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40367	66.4	-	LDMQ01	179	6112	5919	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566313	GCA_001024845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/845/GCA_001024845.1_ASM102484v1	-	Pae_CF67.05h
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.86224	38.9	-	LYKS01	79	3716	3568	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745406	GCA_001864035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/035/GCA_001864035.1_ASM186403v1	-	XH595
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.33216	57.4	-	FLDX01	31	5368	5155	5/19/16	2/25/17	Scaffold	SC	SAMEA2273596	GCA_900084965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/965/GCA_900084965.1_12045_6_60	-	k820
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.38126	57.2	-	FLDY01	61	5405	5156	5/19/16	2/21/17	Scaffold	SC	SAMEA2273598	GCA_900084975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/975/GCA_900084975.1_12045_6_62	-	k823
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.03405	38.9	-	LYKR01	92	3943	3799	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745407	GCA_001864045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/045/GCA_001864045.1_ASM186404v1	-	XH606
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40351	66.4	-	LDMR01	145	6108	5916	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566314	GCA_001024855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/855/GCA_001024855.1_ASM102485v1	-	Pae_CF67.05i
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	1.99522	39.7	-	LJMJ01	66	2194	1985	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946416	GCA_001585675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/675/GCA_001585675.1_ASM158567v1	-	ND2232
Escherichia coli 2726800	1116122	PRJNA77481	77481	Proteobacteria	Gammaproteobacteria	5.21699	50.7	-	AQFE01	48	5550	5092	4/8/13	2/24/17	Contig	IGS	SAMN00829238	GCA_000356625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/625/GCA_000356625.2_ASM35662v2	-	2726800
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39821	65.6	-	MMKV01	9	4277	4104	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918563	GCA_001843045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/045/GCA_001843045.1_ASM184304v1	-	99-R930
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.16693	52.1	-	CZMT01	92	5307	4982	10/21/15	2/28/17	Contig	SC	SAMEA1904396	GCA_001409515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/515/GCA_001409515.1_9472_3_24	-	2511STDY5462409
Staphylococcus aureus M1239	1402736	PRJNA220086	220086	Terrabacteria group	Firmicutes	2.8548	32.8	-	JEIP01	47	3010	2842	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360893	GCA_000574445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/445/GCA_000574445.1_Stap_aure_M1239_V1	-	M1239
Staphylococcus aureus M1238	1402735	PRJNA220085	220085	Terrabacteria group	Firmicutes	2.89064	32.9	-	JEIQ01	66	3067	2884	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360892	GCA_000574465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/465/GCA_000574465.1_Stap_aure_M1238_V1	-	M1238
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.99184	52.1	-	CZMZ01	87	5108	4779	10/21/15	2/28/17	Contig	SC	SAMEA2336260	GCA_001409535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/535/GCA_001409535.1_12227_3_9	-	2511STDY5712413
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3532	65.6	-	MMJE01	8	4247	4081	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916423	GCA_001843105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/105/GCA_001843105.1_ASM184310v1	-	00-R1246
Escherichia coli P0299438.2	1116152	PRJNA77541	77541	Proteobacteria	Gammaproteobacteria	4.91236	50.9	-	AQES01	26	5143	4692	4/8/13	2/25/17	Contig	IGS	SAMN00829352	GCA_000356645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/645/GCA_000356645.2_ASM35664v2	-	P0299438.2
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	1.99962	39.7	-	LJMK01	170	2193	1981	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946417	GCA_001585705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/705/GCA_001585705.1_ASM158570v1	-	FL2255
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39939	66.4	-	LDMS01	191	6127	5899	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566316	GCA_001024875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/875/GCA_001024875.1_ASM102487v1	-	Pae_CF67.05k
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.9738	38.9	-	LYKP01	52	3842	3710	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745409	GCA_001864065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/065/GCA_001864065.1_ASM186406v1	-	XH640
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.38441	57.4	-	FLDZ01	51	5419	5197	5/19/16	2/21/17	Scaffold	SC	SAMEA2273599	GCA_900084985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/985/GCA_900084985.1_12045_6_63	-	k839
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.62721	57.4	-	FLEA01	73	5636	5339	5/19/16	2/21/17	Scaffold	SC	SAMEA2273600	GCA_900084995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/084/995/GCA_900084995.1_12045_6_64	-	k841
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.00248	38.8	-	LYKN01	70	3806	3672	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745411	GCA_001864095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/095/GCA_001864095.1_ASM186409v1	-	XH642
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39593	66.4	-	LDMT01	177	6112	5907	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566317	GCA_001024915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/915/GCA_001024915.1_ASM102491v1	-	Pae_CF67.05l
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.00906	39.6	-	LJML01	74	2212	1996	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946418	GCA_001585725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/725/GCA_001585725.1_ASM158572v1	-	IOW2286
Escherichia coli P0299917.1	1116047	PRJNA77329	77329	Proteobacteria	Gammaproteobacteria	5.53868	50.6	-	AQER01	53	5929	5446	4/8/13	2/25/17	Contig	IGS	SAMN00829362	GCA_000356665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/665/GCA_000356665.2_ASM35666v2	-	P0299917.1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40691	65.6	-	MMEH01	20	4291	4115	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919545	GCA_001843145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/145/GCA_001843145.1_ASM184314v1	-	I0000819-8
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.99671	52.1	-	CZPD01	56	5112	4801	10/21/15	2/28/17	Contig	SC	SAMEA2336267	GCA_001409555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/555/GCA_001409555.1_12227_3_16	-	2511STDY5712420
Staphylococcus aureus M1237	1402734	PRJNA220084	220084	Terrabacteria group	Firmicutes	2.80909	32.8	-	JEIR01	24	2922	2739	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360891	GCA_000574485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/485/GCA_000574485.1_Stap_aure_M1237_V1	-	M1237
Staphylococcus aureus M1236	1402733	PRJNA220083	220083	Terrabacteria group	Firmicutes	2.83309	32.8	-	JEIS01	37	2972	2814	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360890	GCA_000574505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/505/GCA_000574505.1_Stap_aure_M1236_V1	-	M1236
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.92765	52.1	-	CZLW01	50	5023	4725	10/21/15	2/28/17	Contig	SC	SAMEA2336306	GCA_001409575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/575/GCA_001409575.1_12227_3_55	-	2511STDY5712459
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37813	65.6	-	MMEC01	10	4262	4106	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919550	GCA_001843165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/165/GCA_001843165.1_ASM184316v1	-	I0002066-4
Escherichia coli 2846750	1116126	PRJNA77489	77489	Proteobacteria	Gammaproteobacteria	5.05653	50.6	-	AQGG01	193	5573	4949	4/8/13	2/24/17	Contig	IGS	SAMN00829265	GCA_000356685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/685/GCA_000356685.2_ASM35668v2	-	2846750
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.00897	39.6	-	LJKN01	68	2215	1996	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946355	GCA_001585745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/745/GCA_001585745.1_ASM158574v1	-	MT3
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39602	66.4	-	LDMU01	194	6100	5909	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566318	GCA_001024925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/925/GCA_001024925.1_ASM102492v1	-	Pae_CF67.05m
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.90908	38.9	-	LYKJ01	55	3773	3645	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745415	GCA_001864115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/115/GCA_001864115.1_ASM186411v1	-	XH646
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.36556	57.4	-	FLEB01	39	5391	5131	5/19/16	2/25/17	Scaffold	SC	SAMEA2273602	GCA_900085005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/005/GCA_900085005.1_12045_6_66	-	k761
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.52451	57.5	-	FLEC01	25	5491	5269	5/21/16	2/21/17	Scaffold	SC	SAMEA2273604	GCA_900085015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/015/GCA_900085015.1_12045_6_68	-	k305
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.11979	38.9	-	LYKL01	161	4025	3874	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745413	GCA_001864125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/125/GCA_001864125.1_ASM186412v1	-	XH644
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.41011	66.4	-	LDMV01	120	6122	5943	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566319	GCA_001024945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/945/GCA_001024945.1_ASM102494v1	-	Pae_CF67.05n
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.01126	39.6	-	LJKO01	78	2221	1999	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946357	GCA_001585765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/765/GCA_001585765.1_ASM158576v1	-	MT5
Escherichia coli BCE007_MS-11	1116113	PRJNA77461	77461	Proteobacteria	Gammaproteobacteria	5.35679	50.6	-	AQFJ01	54	5831	5145	4/8/13	5/18/17	Contig	IGS	SAMN00829288	GCA_000356705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/705/GCA_000356705.1_ASM35670v1	-	BCE007_MS-11
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39669	65.6	-	MMEG01	22	4261	4092	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919546	GCA_001843175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/175/GCA_001843175.1_ASM184317v1	-	I0000240-7
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.85117	52.2	-	CZOS01	52	4923	4624	10/21/15	2/28/17	Contig	SC	SAMEA2336254	GCA_001409595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/595/GCA_001409595.1_12227_3_3	-	2511STDY5712407
Staphylococcus aureus M1235	1402732	PRJNA220082	220082	Terrabacteria group	Firmicutes	2.84566	32.8	-	JEIT01	30	2985	2827	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360889	GCA_000574525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/525/GCA_000574525.1_Stap_aure_M1235_V1	-	M1235
Staphylococcus aureus M1234	1402731	PRJNA220081	220081	Terrabacteria group	Firmicutes	2.87461	32.8	-	JEIU01	65	3061	2870	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360888	GCA_000574545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/545/GCA_000574545.1_Stap_aure_M1234_V1	-	M1234
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.01203	52.1	-	CZMM01	78	5138	4825	10/21/15	2/28/17	Contig	SC	SAMEA1904385	GCA_001409615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/615/GCA_001409615.1_9472_3_15	-	2511STDY5462400
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41114	65.6	-	MMEB01	21	4300	4130	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919551	GCA_001843185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/185/GCA_001843185.1_ASM184318v1	-	I0001652-2
Escherichia coli BCE008_MS-13	1116471	PRJNA77463	77463	Proteobacteria	Gammaproteobacteria	5.13926	50.7	-	AQFI01	32	5455	4927	4/8/13	2/22/17	Contig	IGS	SAMN00829291	GCA_000356725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/725/GCA_000356725.1_ASM35672v1	-	BCE008_MS-13
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.00848	39.6	-	LJKS01	72	2212	1996	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946361	GCA_001585785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/785/GCA_001585785.1_ASM158578v1	-	MT9
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40468	66.4	-	LDMW01	125	6111	5933	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566320	GCA_001024955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/955/GCA_001024955.1_ASM102495v1	-	Pae_CF67.05o
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.12188	38.9	-	LYKI01	69	3945	3804	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745416	GCA_001864155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/155/GCA_001864155.1_ASM186415v1	-	XH647
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.60768	57	-	FLED01	47	5587	5343	5/19/16	2/21/17	Scaffold	SC	SAMEA2273603	GCA_900085025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/025/GCA_900085025.1_12045_6_67	-	k787
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.15759	57.5	-	FLEE01	97	5233	4948	5/19/16	2/21/17	Scaffold	SC	SAMEA2273605	GCA_900085035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/035/GCA_900085035.1_12045_6_69	-	k414
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.98475	38.8	-	LYKH01	42	3785	3652	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745417	GCA_001864165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/165/GCA_001864165.1_ASM186416v1	-	XH648
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40906	66.4	-	LDMX01	140	6124	5932	6/10/15	3/17/17	Scaffold	University of Toronto	SAMN03566321	GCA_001024995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/024/995/GCA_001024995.1_ASM102499v1	-	Pae_CF67.05p
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.00371	39.7	-	LJKX01	166	2189	1988	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946366	GCA_001585805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/805/GCA_001585805.1_ASM158580v1	-	MT14
Escherichia coli 201600.1	1116129	PRJNA77495	77495	Proteobacteria	Gammaproteobacteria	5.1431	50.6	-	AQFH01	51	5447	4982	4/8/13	2/24/17	Contig	IGS	SAMN00829236	GCA_000356745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/745/GCA_000356745.2_ASM35674v2	-	201600.1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34584	65.6	-	MMAB01	18	4252	4073	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919656	GCA_001843215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/215/GCA_001843215.1_ASM184321v1	-	I0005402-8
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.01428	52.1	-	CZNA01	75	5141	4832	10/21/15	2/28/17	Contig	SC	SAMEA1904392	GCA_001409635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/635/GCA_001409635.1_9472_3_22	-	2511STDY5462407
Staphylococcus aureus M1233	1402730	PRJNA220080	220080	Terrabacteria group	Firmicutes	2.91448	32.9	-	JEIV01	60	3088	2908	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360887	GCA_000574565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/565/GCA_000574565.1_Stap_aure_M1233_V1	-	M1233
Staphylococcus aureus M1232	1402729	PRJNA220079	220079	Terrabacteria group	Firmicutes	2.90353	32.8	-	JEIW01	70	3083	2903	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360886	GCA_000574585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/585/GCA_000574585.1_Stap_aure_M1232_V1	-	M1232
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.96501	52.1	-	CZMN01	51	5071	4771	10/21/15	2/28/17	Contig	SC	SAMEA2336303	GCA_001409655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/655/GCA_001409655.1_12227_3_52	-	2511STDY5712456
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38997	65.5	-	MMEE01	23	4294	4134	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919548	GCA_001843245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/245/GCA_001843245.1_ASM184324v1	-	I0001303-2
Escherichia coli P0302293.10	1116079	PRJNA77393	77393	Proteobacteria	Gammaproteobacteria	5.04596	51	-	AQAA01	437	5417	4986	4/8/13	2/25/17	Contig	IGS	SAMN00829409	GCA_000356765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/765/GCA_000356765.2_ASM35676v2	-	P0302293.10
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.01565	39.7	-	LJLA01	68	2215	1998	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946370	GCA_001585825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/825/GCA_001585825.1_ASM158582v1	-	MT18
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40935	66.4	-	LEEW01	143	6116	5929	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566324	GCA_001034665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/665/GCA_001034665.1_ASM103466v1	-	Pae_CF67.05s
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.96806	38.8	-	LYKF01	73	3851	3714	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745419	GCA_001864195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/195/GCA_001864195.1_ASM186419v1	-	XH650
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.57296	56.9	-	FLEG01	143	5752	5407	5/19/16	2/21/17	Scaffold	SC	SAMEA2273606	GCA_900085045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/045/GCA_900085045.1_12045_6_70	-	k544
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.46181	57.3	-	FLEH01	54	5513	5254	5/19/16	2/22/17	Scaffold	SC	SAMEA2273609	GCA_900085065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/065/GCA_900085065.1_12045_6_73	-	k808
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.98494	38.8	-	LYKC01	44	3786	3657	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745422	GCA_001864235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/235/GCA_001864235.1_ASM186423v1	-	XH661
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.38946	66.4	-	LEFF01	143	6128	5827	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566333	GCA_001034675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/675/GCA_001034675.1_ASM103467v1	-	Pae_CF67.06h
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	1.98917	39.7	-	LJLE01	59	2186	1980	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946375	GCA_001585845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/845/GCA_001585845.1_ASM158584v1	-	MT23
Escherichia coli P0302293.4	1116075	PRJNA77385	77385	Proteobacteria	Gammaproteobacteria	5.22722	50.7	-	AQAC01	133	5633	5198	4/8/13	2/24/17	Contig	IGS	SAMN00829412	GCA_000356785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/785/GCA_000356785.2_ASM35678v2	-	P0302293.4
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35336	65.6	-	MLZX01	9	4240	4082	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919660	GCA_001843255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/255/GCA_001843255.1_ASM184325v1	-	I0005275-8
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.94676	52.1	-	CZLT01	58	5049	4739	10/21/15	2/28/17	Contig	SC	SAMEA2336296	GCA_001409675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/675/GCA_001409675.1_12227_3_45	-	2511STDY5712449
Staphylococcus aureus M1231	1402728	PRJNA220078	220078	Terrabacteria group	Firmicutes	2.88639	32.8	-	JEIX01	65	3060	2893	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360885	GCA_000574605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/605/GCA_000574605.1_Stap_aure_M1231_V1	-	M1231
Staphylococcus aureus M1230	1402727	PRJNA220077	220077	Terrabacteria group	Firmicutes	2.85279	32.8	-	JEIY01	44	2996	2821	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360884	GCA_000574625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/625/GCA_000574625.1_Stap_aure_M1230_V1	-	M1230
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.7516	52.2	-	CZPM01	47	4810	4537	10/21/15	2/28/17	Contig	SC	SAMEA2336262	GCA_001409695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/695/GCA_001409695.1_12227_3_11	-	2511STDY5712415
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40742	65.6	-	MMAC01	24	4296	4119	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919655	GCA_001843275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/275/GCA_001843275.1_ASM184327v1	-	I0004407-8
Escherichia coli P0302293.3	1116074	PRJNA77383	77383	Proteobacteria	Gammaproteobacteria	5.06238	50.7	-	AQAB01	115	5427	5004	4/8/13	2/24/17	Contig	IGS	SAMN00829413	GCA_000356805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/805/GCA_000356805.2_ASM35680v2	-	P0302293.3
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.01191	39.6	-	LJLI01	73	2217	2009	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946379	GCA_001585855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/855/GCA_001585855.1_ASM158585v1	-	MT27
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.38736	66.4	-	LEFH01	180	6167	5711	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566335	GCA_001034685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/685/GCA_001034685.1_ASM103468v1	-	Pae_CF67.06j
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.96434	39	-	LYKA01	63	3824	3688	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745424	GCA_001864285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/285/GCA_001864285.1_ASM186428v1	-	XH663
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.38643	57.3	-	FLEI01	103	5468	5155	5/19/16	2/21/17	Scaffold	SC	SAMEA2273611	GCA_900085075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/075/GCA_900085075.1_12045_6_75	-	k589
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.36496	57.4	-	FLEJ01	43	5395	5134	5/19/16	2/21/17	Scaffold	SC	SAMEA2273612	GCA_900085085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/085/GCA_900085085.1_12045_6_76	-	k764
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.90211	38.8	-	LYJY01	75	3754	3618	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745426	GCA_001864305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/305/GCA_001864305.1_ASM186430v1	-	XH665
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40078	66.4	-	LEFS01	175	6119	5909	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566346	GCA_001034745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/745/GCA_001034745.1_ASM103474v1	-	Pae_CF67.07b
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.0116	39.6	-	LJLL01	179	2206	2002	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946382	GCA_001585885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/885/GCA_001585885.1_ASM158588v1	-	MT30
Escherichia coli P0305260.9	1116083	PRJNA77401	77401	Proteobacteria	Gammaproteobacteria	4.82672	50.8	-	AQBS01	129	5132	4670	4/8/13	2/24/17	Contig	IGS	SAMN00829533	GCA_000356825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/825/GCA_000356825.2_ASM35682v2	-	P0305260.9
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38974	65.6	-	MMED01	17	4282	4093	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919549	GCA_001843295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/295/GCA_001843295.1_ASM184329v1	-	C0004133-6
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.08721	52.1	-	CZNK01	67	5199	4906	10/21/15	2/28/17	Contig	SC	SAMEA1904380	GCA_001409715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/715/GCA_001409715.1_9472_3_6	-	2511STDY5462391
Staphylococcus aureus M1227	1402726	PRJNA220076	220076	Terrabacteria group	Firmicutes	2.83834	32.8	-	JEIZ01	59	3001	2831	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360883	GCA_000574645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/645/GCA_000574645.1_Stap_aure_M1227_V1	-	M1227
Staphylococcus aureus M1225	1402724	PRJNA220074	220074	Terrabacteria group	Firmicutes	2.80842	32.8	-	JEJA01	57	2925	2743	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360881	GCA_000574665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/665/GCA_000574665.1_Stap_aure_M1225_V1	-	M1225
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.13087	52.1	-	CZML01	87	5268	4946	10/21/15	2/28/17	Contig	SC	SAMEA2336305	GCA_001409735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/735/GCA_001409735.1_12227_3_54	-	2511STDY5712458
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35424	65.6	-	MMEA01	18	4245	4077	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919552	GCA_001843325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/325/GCA_001843325.1_ASM184332v1	-	I0001770-2
Escherichia coli 2854350	1125636	PRJNA78859	78859	Proteobacteria	Gammaproteobacteria	4.94922	50.6	-	APZL01	162	5345	4824	4/8/13	2/24/17	Contig	IGS	SAMN00857938	GCA_000356845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/845/GCA_000356845.2_ASM35684v2	-	2854350
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.00501	39.7	-	LJMU01	65	2198	1981	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946385	GCA_001585905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/905/GCA_001585905.1_ASM158590v1	-	MT33
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40208	66.4	-	LEFU01	147	6119	5924	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566348	GCA_001034755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/755/GCA_001034755.1_ASM103475v1	-	Pae_CF67.07d
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.93326	38.8	-	LYJX01	77	3806	3667	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745427	GCA_001864315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/315/GCA_001864315.1_ASM186431v1	-	XH666
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.46506	57.2	-	FLEK01	70	5494	5197	5/19/16	2/21/17	Scaffold	SC	SAMEA2273615	GCA_900085095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/095/GCA_900085095.1_12045_6_78	-	k866
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.469	57.2	-	FLEL01	67	5488	5204	5/19/16	2/21/17	Scaffold	SC	SAMEA2273614	GCA_900085105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/105/GCA_900085105.1_12045_6_77	-	k864
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.98477	38.8	-	LYJV01	42	3790	3657	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745429	GCA_001864355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/355/GCA_001864355.1_ASM186435v1	-	XH668
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40339	66.4	-	LEFV01	169	6121	5921	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566349	GCA_001034765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/765/GCA_001034765.1_ASM103476v1	-	Pae_CF67.07e
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.00276	39.6	-	LJLP01	76	2193	1984	3/10/16	3/5/17	Contig	University of Toronto	SAMN03946388	GCA_001585925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/925/GCA_001585925.1_ASM158592v1	-	MT36
Escherichia coli p0305293.13	1116101	PRJNA77437	77437	Proteobacteria	Gammaproteobacteria	4.83548	51.2	-	APZI01	686	5283	4783	4/8/13	2/24/17	Contig	IGS	SAMN00829539	GCA_000356865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/865/GCA_000356865.2_ASM35686v2	-	p0305293.13
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38106	65.6	-	MMDZ01	9	4261	4093	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919553	GCA_001843335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/335/GCA_001843335.1_ASM184333v1	-	I0001524-3
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.04836	52.1	-	CZMX01	76	5181	4876	10/21/15	2/28/17	Contig	SC	SAMEA2336302	GCA_001409755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/755/GCA_001409755.1_12227_3_51	-	2511STDY5712455
Staphylococcus aureus M1222	1402723	PRJNA220073	220073	Terrabacteria group	Firmicutes	2.86944	32.8	-	JEJB01	36	3015	2858	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360880	GCA_000574685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/685/GCA_000574685.1_Stap_aure_M1222_V1	-	M1222
Staphylococcus aureus M1221	1402722	PRJNA220072	220072	Terrabacteria group	Firmicutes	2.9229	32.9	-	JEJC01	71	3110	2923	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360879	GCA_000574705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/705/GCA_000574705.1_Stap_aure_M1221_V1	-	M1221
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.97649	52.1	-	CZOT01	67	5101	4795	10/21/15	2/28/17	Contig	SC	SAMEA2336247	GCA_001409775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/775/GCA_001409775.1_12216_4_58	-	2511STDY5712400
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36144	65.6	-	MLZO01	7	4243	4078	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919669	GCA_001843355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/355/GCA_001843355.1_ASM184335v1	-	I0005546-2
Escherichia coli BCE006_MS-23	1125637	PRJNA78861	78861	Proteobacteria	Gammaproteobacteria	5.06123	50.4	-	APZM01	224	5624	4873	4/8/13	2/25/17	Contig	IGS	SAMN00858089	GCA_000356885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/885/GCA_000356885.2_ASM35688v2	-	BCE006_MS-23
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.01163	39.6	-	LJLQ01	76	2216	2002	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946389	GCA_001585935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/935/GCA_001585935.1_ASM158593v1	-	MT37
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40085	66.4	-	LEFW01	154	6110	5918	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566350	GCA_001034785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/785/GCA_001034785.1_ASM103478v1	-	Pae_CF67.07f
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.96503	39	-	LYJT01	79	3824	3685	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745431	GCA_001864375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/375/GCA_001864375.1_ASM186437v1	-	XH670
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.54244	57.1	-	FLEM01	68	5567	5276	5/19/16	2/21/17	Scaffold	SC	SAMEA2273616	GCA_900085115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/115/GCA_900085115.1_12045_6_79	-	k868
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.62199	57.2	-	FLEN01	125	5728	5410	5/19/16	2/21/17	Scaffold	SC	SAMEA2273619	GCA_900085125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/125/GCA_900085125.1_12045_6_82	-	k894
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.96316	39	-	LYJU01	64	3825	3689	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745430	GCA_001864385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/385/GCA_001864385.1_ASM186438v1	-	XH669
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40782	66.4	-	LEFZ01	125	6120	5939	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566353	GCA_001034825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/825/GCA_001034825.1_ASM103482v1	-	Pae_CF67.07i
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	1.98838	39.7	-	LJMT01	67	2188	1969	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946392	GCA_001585965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/965/GCA_001585965.1_ASM158596v1	-	CLG1
Escherichia coli 179100	1125652	PRJNA78891	78891	Proteobacteria	Gammaproteobacteria	5.21767	50.6	-	APZJ01	194	5715	5147	4/8/13	5/18/17	Contig	IGS	SAMN00857936	GCA_000356905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/905/GCA_000356905.1_ASM35690v1	-	179100
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41272	65.6	-	MMDY01	28	4302	4125	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919554	GCA_001843375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/375/GCA_001843375.1_ASM184337v1	-	I0001927-8
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.13233	52.1	-	CZMU01	79	5255	4928	10/21/15	2/28/17	Contig	SC	SAMEA2336307	GCA_001409795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/795/GCA_001409795.1_12227_3_56	-	2511STDY5712460
Staphylococcus aureus M1220	1402721	PRJNA220071	220071	Terrabacteria group	Firmicutes	2.88611	32.9	-	JEJD01	52	3045	2874	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360878	GCA_000574725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/725/GCA_000574725.1_Stap_aure_M1220_V1	-	M1220
Staphylococcus aureus M1219	1402720	PRJNA220070	220070	Terrabacteria group	Firmicutes	2.86708	32.8	-	JEJE01	33	3006	2845	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360877	GCA_000574745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/745/GCA_000574745.1_Stap_aure_M1219_V1	-	M1219
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.00761	52.1	-	CZNO01	55	5142	4831	10/21/15	2/28/17	Contig	SC	SAMEA2336250	GCA_001409815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/815/GCA_001409815.1_12216_4_61	-	2511STDY5712403
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38046	65.6	-	MLZP01	11	4271	4105	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919668	GCA_001843405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/405/GCA_001843405.1_ASM184340v1	-	I0005970-4
Escherichia coli 2733950	1125635	PRJNA78857	78857	Proteobacteria	Gammaproteobacteria	5.03768	50.5	-	APZK01	214	5536	4928	4/8/13	2/24/17	Contig	IGS	SAMN00857937	GCA_000356925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/925/GCA_000356925.2_ASM35692v2	-	2733950
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	1.97778	39.7	-	LJMQ01	77	2159	1966	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946397	GCA_001585985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/985/GCA_001585985.1_ASM158598v1	-	CLG6
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40402	66.4	-	LEGD01	197	6130	5891	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566357	GCA_001034835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/835/GCA_001034835.1_ASM103483v1	-	Pae_CF67.07m
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.05741	39	-	LYJR01	70	3951	3810	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745433	GCA_001864395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/395/GCA_001864395.1_ASM186439v1	-	XH672
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.6385	57	-	FLEO01	90	5712	5455	5/19/16	2/21/17	Scaffold	SC	SAMEA2273620	GCA_900085135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/135/GCA_900085135.1_12045_6_83	-	k899
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.30316	57.4	-	FLEP01	60	5322	5077	5/19/16	2/21/17	Scaffold	SC	SAMEA2273622	GCA_900085145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/145/GCA_900085145.1_12045_6_84	-	k906
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.98506	38.8	-	LYJQ01	44	3791	3657	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745434	GCA_001864435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/435/GCA_001864435.1_ASM186443v1	-	XH673
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40798	66.4	-	LEGE01	93	6121	5939	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566358	GCA_001034855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/855/GCA_001034855.1_ASM103485v1	-	Pae_CF67.07n
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	1.98647	39.7	-	LJLZ01	74	2180	1969	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946402	GCA_001586005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/005/GCA_001586005.1_ASM158600v1	-	ON177
Escherichia coli P0302293.6	1116076	PRJNA77387	77387	Proteobacteria	Gammaproteobacteria	5.11861	50.7	-	AQAD01	126	5498	5051	4/8/13	5/18/17	Contig	IGS	SAMN00829414	GCA_000356945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/945/GCA_000356945.1_ASM35694v1	-	P0302293.6
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38732	65.6	-	MMDX01	21	4269	4091	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919555	GCA_001843425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/425/GCA_001843425.1_ASM184342v1	-	I0002058-1
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.01936	52	-	CZLI01	58	5143	4827	10/21/15	2/28/17	Contig	SC	SAMEA2336287	GCA_001409835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/835/GCA_001409835.1_12227_3_36	-	2511STDY5712440
Staphylococcus aureus M1218	1402719	PRJNA220069	220069	Terrabacteria group	Firmicutes	2.85904	32.9	-	JEJF01	15	3000	2835	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360876	GCA_000574765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/765/GCA_000574765.1_Stap_aure_M1218_V1	-	M1218
Staphylococcus aureus M1217	1402718	PRJNA220068	220068	Terrabacteria group	Firmicutes	2.78034	32.7	-	JEJG01	36	2882	2710	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360875	GCA_000574785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/785/GCA_000574785.1_Stap_aure_M1217_V1	-	M1217
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.98851	52.1	-	CZLS01	70	5123	4786	10/21/15	2/28/17	Contig	SC	SAMEA1904378	GCA_001409855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/855/GCA_001409855.1_9472_3_2	-	2511STDY5462387
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40087	65.6	-	MMDW01	5	4276	4114	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919556	GCA_001843435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/435/GCA_001843435.1_ASM184343v1	-	I0002035-9
Escherichia coli P0302293.8	1116077	PRJNA77389	77389	Proteobacteria	Gammaproteobacteria	5.11981	50.7	-	AQAE01	125	5489	5066	4/8/13	5/18/17	Contig	IGS	SAMN00829418	GCA_000356965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/965/GCA_000356965.1_ASM35696v1	-	P0302293.8
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	1.97234	39.8	-	LJMB01	69	2175	1949	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946407	GCA_001586015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/015/GCA_001586015.1_ASM158601v1	-	CA658
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40453	66.4	-	LEGG01	149	6121	5913	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566360	GCA_001034875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/875/GCA_001034875.1_ASM103487v1	-	Pae_CF67.07p
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.27769	39.1	-	LYJN01	634	4053	3859	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745437	GCA_001864455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/455/GCA_001864455.1_ASM186445v1	-	XH850
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.46099	57.3	-	FLEQ01	34	5528	5275	5/19/16	2/25/17	Scaffold	SC	SAMEA2273629	GCA_900085155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/155/GCA_900085155.1_12045_6_89	-	k959
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.91465	57	-	FLES01	111	6029	5667	5/19/16	2/21/17	Scaffold	SC	SAMEA2273625	GCA_900085165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/165/GCA_900085165.1_12045_6_87	-	k913
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.98531	38.8	-	LYJP01	40	3786	3656	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745435	GCA_001864465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/465/GCA_001864465.1_ASM186446v1	-	XH674
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40345	66.4	-	LEGI01	152	6110	5905	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566362	GCA_001034905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/905/GCA_001034905.1_ASM103490v1	-	Pae_CF67.07r
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.00381	39.7	-	LJMD01	168	2183	1978	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946409	GCA_001586045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/045/GCA_001586045.1_ASM158604v1	-	MD651
Escherichia coli P0299438.11	1116046	PRJNA77327	77327	Proteobacteria	Gammaproteobacteria	5.09324	50.6	-	APYB01	118	5430	4992	4/8/13	2/25/17	Contig	IGS	SAMN00829351	GCA_000356985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/356/985/GCA_000356985.2_ASM35698v2	-	P0299438.11
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39091	65.6	-	MLZV01	13	4274	4106	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919662	GCA_001843465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/465/GCA_001843465.1_ASM184346v1	-	I0003372-5
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.05288	52.1	-	CZMD01	76	5189	4888	10/21/15	2/28/17	Contig	SC	SAMEA1904389	GCA_001409875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/875/GCA_001409875.1_9472_3_11	-	2511STDY5462396
Staphylococcus aureus M1214	1402717	PRJNA220067	220067	Terrabacteria group	Firmicutes	2.88636	32.8	-	JEJH01	65	3062	2872	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360874	GCA_000574805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/805/GCA_000574805.1_Stap_aure_M1214_V1	-	M1214
Staphylococcus aureus M1213	1402716	PRJNA220066	220066	Terrabacteria group	Firmicutes	2.80491	32.9	-	JEJI01	39	2905	2716	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360873	GCA_000574825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/825/GCA_000574825.1_Stap_aure_M1213_V1	-	M1213
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.92171	52.1	-	CZNU01	50	5017	4702	10/21/15	2/28/17	Contig	SC	SAMEA2336248	GCA_001409895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/895/GCA_001409895.1_12216_4_59	-	2511STDY5712401
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40049	65.6	-	MMDU01	11	4281	4096	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919558	GCA_001843505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/505/GCA_001843505.1_ASM184350v1	-	I0002341-1
Escherichia coli P0299438.3	1116038	PRJNA77311	77311	Proteobacteria	Gammaproteobacteria	5.07418	50.6	-	APYC01	117	5412	4977	4/8/13	2/24/17	Contig	IGS	SAMN00829353	GCA_000357005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/005/GCA_000357005.2_ASM35700v2	-	P0299438.3
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	1.99456	39.7	-	LJMF01	58	2204	1982	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946412	GCA_001586065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/065/GCA_001586065.1_ASM158606v1	-	CA693
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39519	66.4	-	LEGN01	107	6111	5878	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566367	GCA_001034915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/915/GCA_001034915.1_ASM103491v1	-	Pae_CF67.08c
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.98725	38.9	-	LYJM01	99	3871	3729	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745438	GCA_001864475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/475/GCA_001864475.1_ASM186447v1	-	XH851
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	6.13124	56.9	-	FLER01	70	6264	5957	5/19/16	2/21/17	Scaffold	SC	SAMEA2273624	GCA_900085175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/175/GCA_900085175.1_12045_6_86	-	k911
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.4726	57.5	-	FLET01	40	5435	5205	5/19/16	2/25/17	Scaffold	SC	SAMEA2273631	GCA_900085185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/185/GCA_900085185.1_12045_6_91	-	k967
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.4139	39.2	-	LYJL01	954	3998	3821	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745439	GCA_001864505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/505/GCA_001864505.1_ASM186450v1	-	XH854
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.3844	66.4	-	LEGO01	185	6157	5678	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566368	GCA_001034945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/945/GCA_001034945.1_ASM103494v1	-	Pae_CF67.08d
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.04255	39.7	-	LJMH01	61	2250	2033	3/10/16	3/12/17	Contig	University of Toronto	SAMN03946414	GCA_001586085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/085/GCA_001586085.1_ASM158608v1	-	MD670
Escherichia coli P0299438.4	1116039	PRJNA77313	77313	Proteobacteria	Gammaproteobacteria	5.1677	50.6	-	APYD01	145	5565	5095	4/8/13	2/25/17	Contig	IGS	SAMN00829354	GCA_000357025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/025/GCA_000357025.2_ASM35702v2	-	P0299438.4
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40636	65.6	-	MMDT01	18	4289	4116	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919559	GCA_001843515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/515/GCA_001843515.1_ASM184351v1	-	I0001942-7
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.96021	52.1	-	CZOH01	57	5064	4758	10/21/15	3/1/17	Contig	SC	SAMEA2336249	GCA_001409915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/915/GCA_001409915.1_12216_4_60	-	2511STDY5712402
Staphylococcus aureus M1209	1402714	PRJNA220064	220064	Terrabacteria group	Firmicutes	2.85574	32.8	-	JEJJ01	36	3024	2856	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360871	GCA_000574845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/845/GCA_000574845.1_Stap_aure_M1209_V1	-	M1209
Staphylococcus aureus M1208	1402713	PRJNA220063	220063	Terrabacteria group	Firmicutes	2.80377	32.8	-	JEJK01	54	2910	2723	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360870	GCA_000574865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/865/GCA_000574865.1_Stap_aure_M1208_V1	-	M1208
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.00862	52.1	-	CZPC01	58	5124	4828	10/21/15	2/28/17	Contig	SC	SAMEA2336268	GCA_001409935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/935/GCA_001409935.1_12227_3_17	-	2511STDY5712421
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37439	65.6	-	MMDS01	2	4259	4108	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919560	GCA_001843535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/535/GCA_001843535.1_ASM184353v1	-	I0001406-3
Escherichia coli P0299438.5	1116040	PRJNA77315	77315	Proteobacteria	Gammaproteobacteria	5.08959	50.5	-	APYE01	117	5425	4995	4/8/13	2/24/17	Contig	IGS	SAMN00829355	GCA_000357045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/045/GCA_000357045.2_ASM35704v2	-	P0299438.5
Streptococcus pneumoniae	1313	PRJNA301927	301927	Terrabacteria group	Firmicutes	2.05581	39.6	-	LSFU01	110	2301	2011	3/31/16	3/6/17	Contig	University of Southampton	SAMN04271530	GCA_001604765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/765/GCA_001604765.1_ASM160476v1	-	8
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.4038	66.4	-	LEGP01	94	6115	5924	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566369	GCA_001034955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/955/GCA_001034955.1_ASM103495v1	-	Pae_CF67.08e
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.75876	39.1	-	LYJK01	96	3636	3513	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745440	GCA_001864535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/535/GCA_001864535.1_ASM186453v1	-	XH679
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.40686	57.3	-	FLEU01	47	5359	5126	5/19/16	2/21/17	Scaffold	SC	SAMEA2273632	GCA_900085195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/195/GCA_900085195.1_12045_6_92	-	k981
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.08767	57.4	-	FLEV01	69	5104	4850	5/19/16	2/21/17	Scaffold	SC	SAMEA2273634	GCA_900085205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/205/GCA_900085205.1_12045_6_93	-	k931
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.07584	38.7	-	LYJG01	107	3961	3789	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745444	GCA_001864555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/555/GCA_001864555.1_ASM186455v1	-	XH683
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.38643	66.4	-	LEGQ01	161	6142	5723	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566370	GCA_001034985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/985/GCA_001034985.1_ASM103498v1	-	Pae_CF67.08f
Streptococcus pneumoniae	1313	PRJNA301927	301927	Terrabacteria group	Firmicutes	1.99577	39.7	-	LSFV01	64	2218	1972	3/31/16	3/13/17	Contig	University of Southampton	SAMN04271531	GCA_001604775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/775/GCA_001604775.1_ASM160477v1	-	9
Escherichia coli P0298942.4	1125640	PRJNA78867	78867	Proteobacteria	Gammaproteobacteria	5.09403	50.5	-	APZP01	224	5628	4976	4/8/13	2/24/17	Contig	IGS	SAMN00858012	GCA_000357065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/065/GCA_000357065.2_ASM35706v2	-	P0298942.4
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39109	65.6	-	MMDQ01	20	4277	4104	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919562	GCA_001843585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/585/GCA_001843585.1_ASM184358v1	-	C0005253-1
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.01124	52.1	-	CZON01	63	5128	4832	10/21/15	2/28/17	Contig	SC	SAMEA2336234	GCA_001409955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/955/GCA_001409955.1_12216_4_45	-	2511STDY5712387
Staphylococcus aureus M1207	1402712	PRJNA220062	220062	Terrabacteria group	Firmicutes	2.86045	32.8	-	JEJL01	43	3015	2845	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360869	GCA_000574885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/885/GCA_000574885.1_Stap_aure_M1207_V1	-	M1207
Staphylococcus aureus M1206	1402711	PRJNA220061	220061	Terrabacteria group	Firmicutes	2.92747	32.9	-	JEJM01	33	3089	2918	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360868	GCA_000574905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/905/GCA_000574905.1_Stap_aure_M1206_V1	-	M1206
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.04489	52.1	-	CZNB01	69	5154	4846	10/21/15	2/28/17	Contig	SC	SAMEA2336255	GCA_001409975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/975/GCA_001409975.1_12227_3_4	-	2511STDY5712408
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37869	65.6	-	MMDP01	6	4260	4095	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919563	GCA_001843605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/605/GCA_001843605.1_ASM184360v1	-	C0004314-2
Escherichia coli P0301867.8	1116071	PRJNA77377	77377	Proteobacteria	Gammaproteobacteria	5.10008	51	-	APYY01	635	5500	4947	4/8/13	5/18/17	Contig	IGS	SAMN00829408	GCA_000357085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/085/GCA_000357085.1_ASM35708v1	-	P0301867.8
Streptococcus pneumoniae	1313	PRJNA301927	301927	Terrabacteria group	Firmicutes	1.99731	39.8	-	LSFW01	76	2233	1977	3/31/16	3/6/17	Contig	University of Southampton	SAMN04271533	GCA_001604795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/795/GCA_001604795.1_ASM160479v1	-	3298
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40121	66.4	-	LEGR01	90	6106	5911	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566371	GCA_001035005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/005/GCA_001035005.1_ASM103500v1	-	Pae_CF67.08g
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.01525	39	-	LYJF01	118	3903	3756	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745445	GCA_001864565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/565/GCA_001864565.1_ASM186456v1	-	XH684
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.4692	57.2	-	FLEW01	50	5520	5272	5/19/16	2/21/17	Scaffold	SC	SAMEA2273636	GCA_900085215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/215/GCA_900085215.1_12045_6_95	-	k1004
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.36581	57.4	-	FLEX01	48	5396	5139	5/19/16	2/25/17	Scaffold	SC	SAMEA2273637	GCA_900085225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/225/GCA_900085225.1_12045_6_96	-	k1020
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.74531	38.9	-	LYJI01	64	3507	3378	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745442	GCA_001864575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/575/GCA_001864575.1_ASM186457v1	-	XH681
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39659	66.4	-	LEGS01	131	6136	5818	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566372	GCA_001035025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/025/GCA_001035025.1_ASM103502v1	-	Pae_CF67.08h
Streptococcus pneumoniae	1313	PRJNA301927	301927	Terrabacteria group	Firmicutes	2.12552	39.6	-	LSFX01	64	2382	2107	3/31/16	3/13/17	Contig	University of Southampton	SAMN04271532	GCA_001604825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/604/825/GCA_001604825.1_ASM160482v1	-	3326
Escherichia coli P0299483.2	1125649	PRJNA78885	78885	Proteobacteria	Gammaproteobacteria	5.04868	50.7	-	APZR01	100	5309	4930	4/8/13	5/18/17	Contig	IGS	SAMN00857933	GCA_000357105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/105/GCA_000357105.1_ASM35710v1	-	P0299483.2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40655	65.6	-	MMDO01	19	4296	4126	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919564	GCA_001843615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/615/GCA_001843615.1_ASM184361v1	-	I0002416-1
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.00547	52.1	-	CZNS01	62	5182	4875	10/21/15	2/28/17	Contig	SC	SAMEA2336236	GCA_001409995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/409/995/GCA_001409995.1_12216_4_47	-	2511STDY5712389
Staphylococcus aureus M1204	1402709	PRJNA220059	220059	Terrabacteria group	Firmicutes	2.85889	32.8	-	JEJN01	39	2990	2849	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360866	GCA_000574925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/925/GCA_000574925.1_Stap_aure_M1204_V1	-	M1204
Staphylococcus aureus M1203	1402708	PRJNA220058	220058	Terrabacteria group	Firmicutes	2.85035	32.8	-	JEJO01	39	2999	2843	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360865	GCA_000574945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/945/GCA_000574945.1_Stap_aure_M1203_V1	-	M1203
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.19791	52.1	-	CZNF01	101	5341	5013	10/21/15	2/28/17	Contig	SC	SAMEA1904407	GCA_001410015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/015/GCA_001410015.1_9472_3_32	-	2511STDY5462417
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.42919	65.6	-	MMDN01	8	4315	4148	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919565	GCA_001843645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/645/GCA_001843645.1_ASM184364v1	-	I0001485-7
Escherichia coli P0299483.3	1125650	PRJNA78887	78887	Proteobacteria	Gammaproteobacteria	5.06371	50.7	-	APZS01	130	5335	4949	4/8/13	5/18/17	Contig	IGS	SAMN00857934	GCA_000357125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/125/GCA_000357125.1_ASM35712v1	-	P0299483.3
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.10359	39.9	-	LWGW01	107	2323	2060	8/2/16	3/13/17	Contig	National Institute for Communicable Diseases	SAMN04337336	GCA_001697015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/015/GCA_001697015.1_ASM169701v1	-	39286
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39997	66.4	-	LEGT01	110	6110	5890	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566373	GCA_001035035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/035/GCA_001035035.1_ASM103503v1	-	Pae_CF67.08i
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.96062	38.9	-	LYJE01	83	3862	3723	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745446	GCA_001864615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/615/GCA_001864615.1_ASM186461v1	-	XH685
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.31069	57.8	-	FLEY01	55	5280	4986	5/19/16	2/21/17	Scaffold	SC	SAMEA2273767	GCA_900085235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/235/GCA_900085235.1_12045_7_2	-	k2074
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.38803	57.4	-	FLFA01	49	5429	5167	5/19/16	2/21/17	Scaffold	SC	SAMEA2273769	GCA_900085245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/245/GCA_900085245.1_12045_7_4	-	k2085
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.68777	38.9	-	LYJD01	105	3590	3450	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745447	GCA_001864635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/635/GCA_001864635.1_ASM186463v1	-	XH686
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.3928	66.4	-	LEGU01	126	6108	5860	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566374	GCA_001035065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/065/GCA_001035065.1_ASM103506v1	-	Pae_CF67.08j
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.10724	39.6	-	LWGV01	37	2327	2095	8/2/16	3/13/17	Contig	National Institute for Communicable Diseases	SAMN04337334	GCA_001697085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/085/GCA_001697085.1_ASM169708v1	-	37502
Escherichia coli P02997067.6	1116131	PRJNA77499	77499	Proteobacteria	Gammaproteobacteria	5.41274	50.6	-	APYJ01	200	5873	5393	4/8/13	2/24/17	Contig	IGS	SAMN00829361	GCA_000357145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/145/GCA_000357145.2_ASM35714v2	-	P02997067.6
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40368	65.6	-	MMDM01	15	4288	4117	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919566	GCA_001843655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/655/GCA_001843655.1_ASM184365v1	-	I0001659-7
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.00361	52.1	-	CZNL01	73	5166	4872	10/21/15	2/28/17	Contig	SC	SAMEA1904376	GCA_001410035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/035/GCA_001410035.1_9472_3_4	-	2511STDY5462389
Staphylococcus aureus M1201	1402706	PRJNA220056	220056	Terrabacteria group	Firmicutes	2.86469	32.9	-	JEJP01	31	3017	2853	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360863	GCA_000574965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/965/GCA_000574965.1_Stap_aure_M1201_V1	-	M1201
Staphylococcus aureus M1200	1402705	PRJNA220055	220055	Terrabacteria group	Firmicutes	2.92632	32.9	-	JEJQ01	39	3099	2927	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360862	GCA_000574985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/574/985/GCA_000574985.1_Stap_aure_M1200_V1	-	M1200
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.92338	52.1	-	CZPO01	48	5006	4713	10/21/15	2/28/17	Contig	SC	SAMEA2336271	GCA_001410055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/055/GCA_001410055.1_12227_3_20	-	2511STDY5712424
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38301	65.6	-	MMDJ01	12	4267	4103	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919569	GCA_001843685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/685/GCA_001843685.1_ASM184368v1	-	I0000655-6
Escherichia coli P0299917.10	1116056	PRJNA77347	77347	Proteobacteria	Gammaproteobacteria	5.39699	50.5	-	APYK01	190	5924	5411	4/8/13	5/18/17	Contig	IGS	SAMN00829363	GCA_000357165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/165/GCA_000357165.1_ASM35716v1	-	P0299917.10
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.15319	39.9	-	MCIW01	159	2392	2107	8/29/16	3/13/17	Contig	National Institute for Communicable Diseases	SAMN04337323	GCA_001715865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/865/GCA_001715865.1_ASM171586v1	-	22421
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40006	66.4	-	LEGV01	86	6121	5912	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566375	GCA_001035075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/075/GCA_001035075.1_ASM103507v1	-	Pae_CF67.08k
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.87431	38.9	-	LYJB01	73	3719	3582	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745449	GCA_001864655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/655/GCA_001864655.1_ASM186465v1	-	XH688
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.46518	57.2	-	FLEZ01	23	5444	5183	5/19/16	2/21/17	Scaffold	SC	SAMEA2273775	GCA_900085255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/255/GCA_900085255.1_12045_7_9	-	k1983
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.56686	57.2	-	FLFD01	57	5611	5325	5/19/16	2/21/17	Scaffold	SC	SAMEA2273777	GCA_900085265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/265/GCA_900085265.1_12045_7_11	-	k2000
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.75897	38.9	-	LYJC01	100	3644	3506	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745448	GCA_001864665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/665/GCA_001864665.1_ASM186466v1	-	XH687
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40367	66.4	-	LEGW01	85	6113	5927	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566376	GCA_001035105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/105/GCA_001035105.1_ASM103510v1	-	Pae_CF67.08l
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	1.91284	40.6	-	MCIY01	378	2162	1886	8/29/16	3/13/17	Contig	National Institute for Communicable Diseases	SAMN04337331	GCA_001715905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/905/GCA_001715905.1_ASM171590v1	-	30024
Escherichia coli P0299917.2	1116048	PRJNA77331	77331	Proteobacteria	Gammaproteobacteria	5.25204	50.6	-	APYL01	177	5720	5226	4/8/13	2/24/17	Contig	IGS	SAMN00829364	GCA_000357185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/185/GCA_000357185.2_ASM35718v2	-	P0299917.2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36841	65.6	-	MMDL01	4	4246	4092	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919567	GCA_001843705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/705/GCA_001843705.1_ASM184370v1	-	I0001662-1
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.84115	52.1	-	CZMA01	57	4922	4624	10/21/15	2/28/17	Contig	SC	SAMEA2336258	GCA_001410075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/075/GCA_001410075.1_12227_3_7	-	2511STDY5712411
Staphylococcus aureus M1197	1402704	PRJNA220054	220054	Terrabacteria group	Firmicutes	2.88173	32.8	-	JEJR01	50	3031	2869	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360861	GCA_000575005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/005/GCA_000575005.1_Stap_aure_M1197_V1	-	M1197
Staphylococcus aureus M1195	1402702	PRJNA220052	220052	Terrabacteria group	Firmicutes	2.88701	32.9	-	JEJS01	51	3044	2877	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360859	GCA_000575025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/025/GCA_000575025.1_Stap_aure_M1195_V1	-	M1195
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.08508	52.1	-	CZND01	65	5199	4898	10/21/15	2/28/17	Contig	SC	SAMEA1904404	GCA_001410095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/095/GCA_001410095.1_9472_3_31	-	2511STDY5462416
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39319	65.6	-	MMDK01	11	4265	4098	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919568	GCA_001843725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/725/GCA_001843725.1_ASM184372v1	-	I0002160-5
Escherichia coli P0299917.3	1116049	PRJNA77333	77333	Proteobacteria	Gammaproteobacteria	4.98018	51	-	APYM01	374	5366	4939	4/8/13	2/24/17	Contig	IGS	SAMN00829365	GCA_000357205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/205/GCA_000357205.2_ASM35720v2	-	P0299917.3
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.12252	40	-	MDXL01	229	2392	2084	9/6/16	3/13/17	Contig	National Institute for Communicable Diseases	SAMN04337320	GCA_001719685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/685/GCA_001719685.1_ASM171968v1	-	21320-19F
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39937	66.4	-	LEGX01	111	6123	5887	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566377	GCA_001035115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/115/GCA_001035115.1_ASM103511v1	-	Pae_CF67.08m
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.94054	39	-	LYJA01	53	3795	3667	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745450	GCA_001864675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/675/GCA_001864675.1_ASM186467v1	-	XH689
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.41409	57.3	-	FLFC01	51	5365	5137	5/19/16	2/21/17	Scaffold	SC	SAMEA2273776	GCA_900085275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/275/GCA_900085275.1_12045_7_10	-	k1989
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.33041	57.4	-	FLFB01	47	5377	5149	5/19/16	2/21/17	Scaffold	SC	SAMEA2273778	GCA_900085285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/285/GCA_900085285.1_12045_7_12	-	k2029
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.75564	38.8	-	LYIY01	60	3615	3447	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745452	GCA_001864715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/715/GCA_001864715.1_ASM186471v1	-	XH693
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39875	66.4	-	LEGY01	105	6121	5897	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566378	GCA_001035145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/145/GCA_001035145.1_ASM103514v1	-	Pae_CF67.08n
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.07632	39.9	-	MDXO01	195	2346	2070	9/6/16	3/13/17	Contig	National Institute for Communicable Diseases	SAMN04337316	GCA_001719695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/695/GCA_001719695.1_ASM171969v1	-	20731-14
Escherichia coli P0299438.6	1116041	PRJNA77317	77317	Proteobacteria	Gammaproteobacteria	5.09014	50.6	-	APYF01	126	5430	4986	4/8/13	2/25/17	Contig	IGS	SAMN00829356	GCA_000357225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/225/GCA_000357225.2_ASM35722v2	-	P0299438.6
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34783	65.6	-	MMDI01	28	4257	4084	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919570	GCA_001843745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/745/GCA_001843745.1_ASM184374v1	-	I0002150-6
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.16545	52.1	-	CZLQ01	81	5307	4987	10/21/15	2/28/17	Contig	SC	SAMEA1904387	GCA_001410115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/115/GCA_001410115.1_9472_3_12	-	2511STDY5462397
Staphylococcus aureus M1192	1402700	PRJNA220050	220050	Terrabacteria group	Firmicutes	2.85684	32.8	-	JEJT01	39	3013	2858	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360857	GCA_000575045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/045/GCA_000575045.1_Stap_aure_M1192_V1	-	M1192
Staphylococcus aureus M1189	1402697	PRJNA220047	220047	Terrabacteria group	Firmicutes	2.86461	32.8	-	JEJU01	53	3023	2860	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360854	GCA_000575065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/065/GCA_000575065.1_Stap_aure_M1189_V1	-	M1189
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.87525	52.1	-	CZNV01	59	4956	4646	10/21/15	2/28/17	Contig	SC	SAMEA2336239	GCA_001410135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/135/GCA_001410135.1_12216_4_50	-	2511STDY5712392
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37145	65.6	-	MLZQ01	12	4245	4074	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919667	GCA_001843765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/765/GCA_001843765.1_ASM184376v1	-	I0005704-7
Escherichia coli P0299438.7	1116042	PRJNA77319	77319	Proteobacteria	Gammaproteobacteria	5.09414	50.6	-	APYG01	122	5439	4996	4/8/13	5/18/17	Contig	IGS	SAMN00829357	GCA_000357245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/245/GCA_000357245.1_ASM35724v1	-	P0299438.7
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.12983	40.1	-	MDXM01	230	2429	2125	9/6/16	3/13/17	Contig	National Institute for Communicable Diseases	SAMN04337321	GCA_001719745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/745/GCA_001719745.1_ASM171974v1	-	21320-6B
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.38963	66.4	-	LEGZ01	135	6119	5843	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566379	GCA_001035155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/155/GCA_001035155.1_ASM103515v1	-	Pae_CF67.08o
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.85551	38.8	-	LYIW01	79	3715	3580	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745454	GCA_001864745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/745/GCA_001864745.1_ASM186474v1	-	XH697
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.48134	57.3	-	FLFE01	66	5557	5319	5/19/16	2/21/17	Scaffold	SC	SAMEA2273779	GCA_900085295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/295/GCA_900085295.1_12045_7_13	-	k2037
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.54577	57.2	-	FLFF01	43	5600	5358	5/19/16	2/21/17	Scaffold	SC	SAMEA2273781	GCA_900085305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/305/GCA_900085305.1_12045_7_14	-	k2052
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.04187	39	-	LYIV01	81	3926	3775	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745455	GCA_001864755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/755/GCA_001864755.1_ASM186475v1	-	XH698
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.38379	66.4	-	LEHA01	191	6142	5753	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566380	GCA_001035175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/175/GCA_001035175.1_ASM103517v1	-	Pae_CF67.08p
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.05052	40.2	-	MDXR01	187	2308	2052	9/6/16	3/13/17	Contig	National Institute for Communicable Diseases	SAMN04337314	GCA_001719755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/755/GCA_001719755.1_ASM171975v1	-	18856
Escherichia coli P0299438.8	1116043	PRJNA77321	77321	Proteobacteria	Gammaproteobacteria	5.09361	50.6	-	APYH01	121	5433	5009	4/8/13	2/24/17	Contig	IGS	SAMN00829359	GCA_000357265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/265/GCA_000357265.2_ASM35726v2	-	P0299438.8
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36958	65.6	-	MMDH01	38	4272	4093	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919571	GCA_001843785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/785/GCA_001843785.1_ASM184378v1	-	I0001962-5
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.0234	52.1	-	CZOC01	81	5147	4818	10/21/15	2/28/17	Contig	SC	SAMEA2336275	GCA_001410155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/155/GCA_001410155.1_12227_3_24	-	2511STDY5712428
Staphylococcus aureus M1187	1402696	PRJNA220046	220046	Terrabacteria group	Firmicutes	2.88656	32.8	-	JEJV01	85	3074	2894	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360853	GCA_000575085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/085/GCA_000575085.1_Stap_aure_M1187_V1	-	M1187
Staphylococcus aureus M1186	1402695	PRJNA220045	220045	Terrabacteria group	Firmicutes	2.86778	32.8	-	JEJW01	47	3041	2872	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360852	GCA_000575105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/105/GCA_000575105.1_Stap_aure_M1186_V1	-	M1186
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.10168	52.1	-	CZPB01	58	5219	4912	10/21/15	2/28/17	Contig	SC	SAMEA2336265	GCA_001410175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/175/GCA_001410175.1_12227_3_14	-	2511STDY5712418
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39539	65.6	-	MMDG01	12	4270	4095	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919572	GCA_001843805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/805/GCA_001843805.1_ASM184380v1	-	I0002167-0
Escherichia coli P0299438.9	1116044	PRJNA77323	77323	Proteobacteria	Gammaproteobacteria	4.83009	50.8	-	APYI01	134	5138	4670	4/8/13	2/24/17	Contig	IGS	SAMN00829360	GCA_000357285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/285/GCA_000357285.2_ASM35728v2	-	P0299438.9
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.06395	40	-	MDXW01	160	2344	2070	9/6/16	3/13/17	Contig	National Institute for Communicable Diseases	SAMN04337309	GCA_001719805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/805/GCA_001719805.1_ASM171980v1	-	12985-6A
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.38652	66.4	-	LEHB01	202	6139	5815	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566381	GCA_001035205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/205/GCA_001035205.1_ASM103520v1	-	Pae_CF67.08q
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.86077	39	-	LYIU01	151	3687	3556	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745456	GCA_001864795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/795/GCA_001864795.1_ASM186479v1	-	XH701
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.84469	56.9	-	FLFH01	92	5931	5620	5/19/16	2/21/17	Scaffold	SC	SAMEA2273783	GCA_900085315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/315/GCA_900085315.1_12045_7_15	-	k1961
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.62226	57.1	-	FLFG01	47	5660	5397	5/19/16	2/21/17	Scaffold	SC	SAMEA2273784	GCA_900085325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/325/GCA_900085325.1_12045_7_16	-	k1970
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.69483	38.7	-	LYIT01	95	3617	3477	11/2/16	3/20/17	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745457	GCA_001864815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/815/GCA_001864815.1_ASM186481v1	-	XH702
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39801	66.4	-	LEHC01	106	6115	5905	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566382	GCA_001035225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/225/GCA_001035225.1_ASM103522v1	-	Pae_CF67.08r
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.05715	40	-	MDXQ01	102	2274	2019	9/6/16	3/8/17	Contig	National Institute for Communicable Diseases	SAMN04337313	GCA_001719885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/885/GCA_001719885.1_ASM171988v1	-	18839-3
Escherichia coli P0299917.4	1116050	PRJNA77335	77335	Proteobacteria	Gammaproteobacteria	5.34476	50.5	-	APYN01	195	5820	5321	4/8/13	2/24/17	Contig	IGS	SAMN00829366	GCA_000357305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/305/GCA_000357305.2_ASM35730v2	-	P0299917.4
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38114	65.6	-	MMDF01	27	4268	4100	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919573	GCA_001843815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/815/GCA_001843815.1_ASM184381v1	-	I0002483-1
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.01053	52.1	-	CZMH01	58	5125	4825	10/21/15	2/28/17	Contig	SC	SAMEA2336291	GCA_001410195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/195/GCA_001410195.1_12227_3_40	-	2511STDY5712444
Staphylococcus aureus M1182	1402691	PRJNA220041	220041	Terrabacteria group	Firmicutes	2.94375	33	-	JEJX01	81	3137	2940	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360848	GCA_000575125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/125/GCA_000575125.1_Stap_aure_M1182_V1	-	M1182
Staphylococcus aureus M1181	1402690	PRJNA220040	220040	Terrabacteria group	Firmicutes	2.86766	32.8	-	JEJY01	44	3028	2849	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360847	GCA_000575145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/145/GCA_000575145.1_Stap_aure_M1181_V1	-	M1181
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.93907	52.2	-	CZNN01	70	5073	4758	10/21/15	2/28/17	Contig	SC	SAMEA1904381	GCA_001410215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/215/GCA_001410215.1_9472_3_7	-	2511STDY5462392
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3756	65.6	-	MMDD01	14	4259	4097	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919575	GCA_001843845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/845/GCA_001843845.1_ASM184384v1	-	I0002604-2
Escherichia coli P0299917.5	1116051	PRJNA77337	77337	Proteobacteria	Gammaproteobacteria	5.39492	50.5	-	APYO01	210	5919	5393	4/8/13	5/18/17	Contig	IGS	SAMN00829368	GCA_000357325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/325/GCA_000357325.1_ASM35732v1	-	P0299917.5
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	1.98629	40.3	-	MDYA01	380	2256	1967	9/6/16	3/13/17	Contig	National Institute for Communicable Diseases	SAMN04337301	GCA_001719895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/895/GCA_001719895.1_ASM171989v1	-	7204
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39266	66.4	-	LEHD01	135	6125	5846	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566383	GCA_001035235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/235/GCA_001035235.1_ASM103523v1	-	Pae_CF67.08s
Acinetobacter baumannii	470	PRJNA321568	321568	Proteobacteria	Gammaproteobacteria	3.87268	39	-	LZOC01	60	3743	3575	12/19/16	3/21/17	Scaffold	CSIR-Institute of Microbial Technology	SAMN04992847	GCA_001909135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/135/GCA_001909135.1_ASM190913v1	-	AB067
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.2779	57.3	-	FLFI01	49	5269	4986	5/19/16	2/21/17	Scaffold	SC	SAMEA2273786	GCA_900085335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/335/GCA_900085335.1_12045_7_18	-	k1102
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.52762	57.1	-	FLFJ01	37	5597	5333	5/19/16	2/21/17	Scaffold	SC	SAMEA2273787	GCA_900085345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/345/GCA_900085345.1_12045_7_19	-	k1160
Acinetobacter baumannii	470	PRJNA244617	244617	Proteobacteria	Gammaproteobacteria	3.95332	38.7	-	JJOC01	16	3815	3637	1/5/17	3/22/17	Scaffold	"BMSSI, CNRS UMR5086, Universite Lyon"	SAMN02727811	GCA_001936675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/675/GCA_001936675.1_ASM193667v1	-	DSM 30011
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.38587	66.4	-	LEHE01	169	6115	5823	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566384	GCA_001035245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/245/GCA_001035245.1_ASM103524v1	-	Pae_CF67.08t
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.08789	40.1	-	MDXP01	204	2352	2090	9/6/16	3/13/17	Contig	National Institute for Communicable Diseases	SAMN04337315	GCA_001719905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/905/GCA_001719905.1_ASM171990v1	-	18858
Escherichia coli P0299917.6	1116052	PRJNA77339	77339	Proteobacteria	Gammaproteobacteria	5.34085	50.5	-	APYP01	180	5841	5349	4/8/13	2/25/17	Contig	IGS	SAMN00829367	GCA_000357345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/345/GCA_000357345.2_ASM35734v2	-	P0299917.6
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39319	65.6	-	MMDE01	19	4279	4099	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919574	GCA_001843855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/855/GCA_001843855.1_ASM184385v1	-	C0001232-9
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.97694	52.1	-	CZOZ01	55	5078	4783	10/21/15	2/28/17	Contig	SC	SAMEA2336280	GCA_001410235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/235/GCA_001410235.1_12227_3_29	-	2511STDY5712433
Staphylococcus aureus M1180	1402689	PRJNA220039	220039	Terrabacteria group	Firmicutes	2.84532	32.8	-	JEJZ01	47	2991	2812	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360846	GCA_000575165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/165/GCA_000575165.1_Stap_aure_M1180_V1	-	M1180
Staphylococcus aureus M1174	1402683	PRJNA220033	220033	Terrabacteria group	Firmicutes	2.87586	32.9	-	JEKA01	44	3022	2841	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360840	GCA_000575185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/185/GCA_000575185.1_Stap_aure_M1174_V1	-	M1174
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.91744	52.1	-	CZPK01	44	5001	4716	10/21/15	2/28/17	Contig	SC	SAMEA2336289	GCA_001410255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/255/GCA_001410255.1_12227_3_38	-	2511STDY5712442
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39442	65.6	-	MLZR01	11	4267	4101	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919666	GCA_001843885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/885/GCA_001843885.1_ASM184388v1	-	I0005682-5
Escherichia coli P0299917.7	1116053	PRJNA77341	77341	Proteobacteria	Gammaproteobacteria	5.25353	50.5	-	APYQ01	181	5711	5241	4/8/13	2/25/17	Contig	IGS	SAMN00829369	GCA_000357365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/365/GCA_000357365.2_ASM35736v2	-	P0299917.7
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.19216	39.8	-	MDXZ01	116	2446	2179	9/6/16	3/6/17	Contig	National Institute for Communicable Diseases	SAMN04337306	GCA_001719955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/955/GCA_001719955.1_ASM171995v1	-	10598-19F
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40386	66.4	-	LEHF01	210	6125	5912	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566385	GCA_001035285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/285/GCA_001035285.1_ASM103528v1	-	Pae_CF67.09a
Acinetobacter baumannii	470	PRJNA308422	308422	Proteobacteria	Gammaproteobacteria	4.03204	39.3	-	MSMK01	483	3962	3786	1/12/17	4/6/17	Scaffold	CHU A Coruna	SAMN06099616	GCA_001949935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/935/GCA_001949935.1_ASM194993v1	28328989	Ab33_GEIH-2010
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.23519	57.5	-	FLFK01	33	5180	4928	5/19/16	2/21/17	Scaffold	SC	SAMEA2273790	GCA_900085355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/355/GCA_900085355.1_12045_7_20	-	k1315
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.56438	57.1	-	FLFL01	45	5624	5374	5/19/16	2/21/17	Scaffold	SC	SAMEA2273791	GCA_900085365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/365/GCA_900085365.1_12045_7_21	-	k1816
Acinetobacter baumannii	470	PRJNA308422	308422	Proteobacteria	Gammaproteobacteria	3.97243	39.4	-	MSML01	655	3913	3722	1/12/17	4/6/17	Scaffold	CHU A Coruna	SAMN06106557	GCA_001949945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/945/GCA_001949945.1_ASM194994v1	28328989	Ab54_GEIH-2010
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.4037	66.4	-	LEHG01	136	6116	5930	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566386	GCA_001035305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/305/GCA_001035305.1_ASM103530v1	-	Pae_CF67.09b
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.09566	39.9	-	MDYC01	131	2345	2074	9/6/16	3/13/17	Contig	National Institute for Communicable Diseases	SAMN04337299	GCA_001720025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/025/GCA_001720025.1_ASM172002v1	-	1229-14
Escherichia coli P0298942.15	1116151	PRJNA77539	77539	Proteobacteria	Gammaproteobacteria	5.05231	50.5	-	APXU01	210	5529	4904	4/8/13	2/24/17	Contig	IGS	SAMN00829344	GCA_000357385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/385/GCA_000357385.2_ASM35738v2	-	P0298942.15
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38758	65.6	-	MMDC01	8	4268	4107	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919576	GCA_001843895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/895/GCA_001843895.1_ASM184389v1	-	I0002458-3
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.92629	52.2	-	CZMB01	52	4990	4710	10/21/15	2/28/17	Contig	SC	SAMEA2336298	GCA_001410275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/275/GCA_001410275.1_12227_3_47	-	2511STDY5712451
Staphylococcus aureus M1172	1402682	PRJNA220032	220032	Terrabacteria group	Firmicutes	2.87929	32.9	-	JEKB01	6	3012	2852	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360839	GCA_000575205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/205/GCA_000575205.1_Stap_aure_M1172_V1	-	M1172
Staphylococcus aureus M1171	1402681	PRJNA220031	220031	Terrabacteria group	Firmicutes	2.85006	32.9	-	JEKC01	32	2995	2831	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360838	GCA_000575225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/225/GCA_000575225.1_Stap_aure_M1171_V1	-	M1171
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.84235	52.2	-	CZOI01	69	4938	4652	10/21/15	2/28/17	Contig	SC	SAMEA2336238	GCA_001410295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/295/GCA_001410295.1_12216_4_49	-	2511STDY5712391
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39985	65.6	-	MMDA01	8	4267	4104	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919578	GCA_001843925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/925/GCA_001843925.1_ASM184392v1	-	I0003152-1
Escherichia coli P0298942.2	1116142	PRJNA77521	77521	Proteobacteria	Gammaproteobacteria	4.87422	51	-	APXV01	298	5270	4747	4/8/13	2/24/17	Contig	IGS	SAMN00829345	GCA_000357405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/405/GCA_000357405.2_ASM35740v2	-	P0298942.2
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.12877	39.8	-	MDYH01	75	2367	2112	9/6/16	3/6/17	Contig	National Institute for Communicable Diseases	SAMN04337319	GCA_001720085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/085/GCA_001720085.1_ASM172008v1	-	20893-14
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39281	66.4	-	LEHI01	216	6117	5891	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566388	GCA_001035315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/315/GCA_001035315.1_ASM103531v1	-	Pae_CF67.09d
Acinetobacter baumannii	470	PRJNA308422	308422	Proteobacteria	Gammaproteobacteria	3.96061	39.4	-	MSMA01	650	3913	3709	1/12/17	4/6/17	Scaffold	CHU A Coruna	SAMN06106560	GCA_001950035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/035/GCA_001950035.1_ASM195003v1	28328989	Ab104_GEIH-2010
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.50673	57.1	-	FLFM01	64	5496	5226	5/19/16	2/21/17	Scaffold	SC	SAMEA2273792	GCA_900085375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/375/GCA_900085375.1_12045_7_22	-	k2141
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.4863	57.2	-	FLFN01	37	5456	5212	5/19/16	2/21/17	Scaffold	SC	SAMEA2273793	GCA_900085385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/385/GCA_900085385.1_12045_7_23	-	k2142
Acinetobacter baumannii	470	PRJNA308422	308422	Proteobacteria	Gammaproteobacteria	3.8607	39.6	-	MSMC01	885	3844	3617	1/12/17	4/6/17	Scaffold	CHU A Coruna	SAMN06106563	GCA_001950065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/065/GCA_001950065.1_ASM195006v1	28328989	Ab158_GEIH-2000
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40486	66.4	-	LEHH01	139	6121	5931	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566387	GCA_001035325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/325/GCA_001035325.1_ASM103532v1	-	Pae_CF67.09c
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.15336	40.1	-	LYQH01	252	2435	2167	9/15/16	3/13/17	Contig	National Institute for Communicable Diseases	SAMN04337329	GCA_001728875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/875/GCA_001728875.1_ASM172887v1	-	29546-6B
Escherichia coli P0298942.6	1116143	PRJNA77523	77523	Proteobacteria	Gammaproteobacteria	5.05097	50.5	-	APXW01	199	5558	4968	4/8/13	2/25/17	Contig	IGS	SAMN00829346	GCA_000357425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/425/GCA_000357425.2_ASM35742v2	-	P0298942.6
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37813	65.6	-	MMDB01	6	4260	4093	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919577	GCA_001843935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/935/GCA_001843935.1_ASM184393v1	-	I0003168-7
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.09888	52	-	CZLO01	66	5251	4943	10/21/15	2/28/17	Contig	SC	SAMEA2336257	GCA_001410315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/315/GCA_001410315.1_12227_3_6	-	2511STDY5712410
Staphylococcus aureus M1169	1402680	PRJNA220030	220030	Terrabacteria group	Firmicutes	2.7454	32.8	-	JEKD01	61	2816	2658	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360837	GCA_000575245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/245/GCA_000575245.1_Stap_aure_M1169_V1	-	M1169
Staphylococcus aureus M1168	1402679	PRJNA220029	220029	Terrabacteria group	Firmicutes	2.89276	32.8	-	JEKE01	64	3094	2920	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360836	GCA_000575265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/265/GCA_000575265.1_Stap_aure_M1168_V1	-	M1168
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.97714	52.1	-	CZMC01	55	5063	4763	10/21/15	2/28/17	Contig	SC	SAMEA2336308	GCA_001410335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/335/GCA_001410335.1_12227_3_57	-	2511STDY5712461
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41552	65.6	-	MMCZ01	7	4293	4139	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919579	GCA_001843965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/965/GCA_001843965.1_ASM184396v1	-	I0002154-8
Escherichia coli P0298942.3	1125639	PRJNA78865	78865	Proteobacteria	Gammaproteobacteria	5.05734	50.5	-	APZO01	207	5581	4902	4/8/13	2/24/17	Contig	IGS	SAMN00858015	GCA_000357445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/445/GCA_000357445.2_ASM35744v2	-	P0298942.3
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.20327	40	-	LZNU01	220	2468	2182	9/20/16	3/13/17	Contig	National Institute for Communicable Diseases	SAMN04337324	GCA_001735965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/735/965/GCA_001735965.1_ASM173596v1	-	22874-6B
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.4057	66.4	-	LEHJ01	128	6111	5934	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566389	GCA_001035365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/365/GCA_001035365.1_ASM103536v1	-	Pae_CF67.09e
Acinetobacter baumannii	470	PRJNA308422	308422	Proteobacteria	Gammaproteobacteria	3.86304	39.4	-	MSMM01	626	3840	3635	1/12/17	4/6/17	Scaffold	CHU A Coruna	SAMN06100271	GCA_001950165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/165/GCA_001950165.1_ASM195016v1	28328989	Ab49_GEIH-2010
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.54207	57.1	-	FLFQ01	82	5598	5324	5/19/16	2/21/17	Scaffold	SC	SAMEA2273794	GCA_900085395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/395/GCA_900085395.1_12045_7_24	-	k2150
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.50591	57.2	-	FLFO01	47	5571	5319	5/19/16	2/21/17	Scaffold	SC	SAMEA2273795	GCA_900085405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/405/GCA_900085405.1_12045_7_25	-	k2169
Acinetobacter baumannii	470	PRJNA308422	308422	Proteobacteria	Gammaproteobacteria	3.98726	39.3	-	MSLZ01	522	3912	3738	1/12/17	4/6/17	Scaffold	CHU A Coruna	SAMN06106561	GCA_001950195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/195/GCA_001950195.1_ASM195019v1	28328989	Ab121_GEIH-2010
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40592	66.4	-	LEHK01	129	6116	5926	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566390	GCA_001035385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/385/GCA_001035385.1_ASM103538v1	-	Pae_CF67.09f
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	1.96407	40.4	-	LZNW01	339	2265	1944	9/20/16	3/13/17	Contig	National Institute for Communicable Diseases	SAMN04337326	GCA_001735995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/735/995/GCA_001735995.1_ASM173599v1	-	29170-6A
Escherichia coli P0299483.1	1125648	PRJNA78883	78883	Proteobacteria	Gammaproteobacteria	5.05334	50.7	-	APZQ01	117	5322	4927	4/8/13	2/25/17	Contig	IGS	SAMN00857931	GCA_000357465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/465/GCA_000357465.2_ASM35746v2	-	P0299483.1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38384	65.6	-	MMAA01	19	4271	4092	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919657	GCA_001843985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/985/GCA_001843985.1_ASM184398v1	-	I0004703-0
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.99552	52.1	-	CZMK01	59	5112	4808	10/21/15	2/28/17	Contig	SC	SAMEA2336288	GCA_001410355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/355/GCA_001410355.1_12227_3_37	-	2511STDY5712441
Staphylococcus aureus M1166	1402678	PRJNA220028	220028	Terrabacteria group	Firmicutes	2.85582	32.8	-	JEKF01	49	3011	2850	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360835	GCA_000575285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/285/GCA_000575285.1_Stap_aure_M1166_V1	-	M1166
Staphylococcus aureus M1165	1402677	PRJNA220027	220027	Terrabacteria group	Firmicutes	2.89796	32.9	-	JEKG01	61	3070	2901	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360834	GCA_000575305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/305/GCA_000575305.1_Stap_aure_M1165_V1	-	M1165
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.03572	52.1	-	CZOP01	69	5162	4848	10/21/15	2/28/17	Contig	SC	SAMEA2336273	GCA_001410375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/375/GCA_001410375.1_12227_3_22	-	2511STDY5712426
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.4028	65.6	-	MMCY01	8	4265	4091	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919580	GCA_001844015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/015/GCA_001844015.1_ASM184401v1	-	I0002145-6
Escherichia coli p0305293.14	1125646	PRJNA78879	78879	Proteobacteria	Gammaproteobacteria	5.10912	50.4	-	APZZ01	160	5594	5085	4/8/13	2/24/17	Contig	IGS	SAMN00858020	GCA_000357485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/485/GCA_000357485.2_ASM35748v2	-	p0305293.14
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	1.99567	40.3	-	MDYD01	317	2235	1953	9/6/16	3/14/17	Contig	National Institute for Communicable Diseases	SAMN04337298	GCA_001857565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/857/565/GCA_001857565.1_ASM185756v1	-	1229-19A
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40285	66.4	-	LEHL01	156	6109	5928	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566391	GCA_001035395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/395/GCA_001035395.1_ASM103539v1	-	Pae_CF67.09g
Acinetobacter baumannii	470	PRJNA308422	308422	Proteobacteria	Gammaproteobacteria	3.89686	39.4	-	MSME01	511	3780	3608	1/12/17	4/6/17	Scaffold	CHU A Coruna	SAMN06106568	GCA_001950215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/215/GCA_001950215.1_ASM195021v1	28328989	Ab177_GEIH-2000
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.52878	57.1	-	FLFP01	66	5615	5326	5/19/16	2/21/17	Scaffold	SC	SAMEA2273796	GCA_900085415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/415/GCA_900085415.1_12045_7_26	-	k2226
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.47616	57.2	-	FLFS01	27	5513	5264	5/19/16	2/21/17	Scaffold	SC	SAMEA2273797	GCA_900085425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/425/GCA_900085425.1_12045_7_27	-	k2238
Acinetobacter baumannii	470	PRJNA308422	308422	Proteobacteria	Gammaproteobacteria	3.8489	39.6	-	MSMB01	820	3821	3590	1/12/17	4/6/17	Scaffold	CHU A Coruna	SAMN06106564	GCA_001950285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/285/GCA_001950285.1_ASM195028v1	28328989	Ab161_GEIH-2000
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40689	66.4	-	LEHM01	124	6112	5937	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566392	GCA_001035415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/415/GCA_001035415.1_ASM103541v1	-	Pae_CF67.09h
Streptococcus pneumoniae	1313	PRJNA315442	315442	Terrabacteria group	Firmicutes	2.06475	39.5	-	MLGO01	102	2272	2036	11/2/16	3/14/17	Contig	University of Toronto	SAMN04559953	GCA_001860545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/545/GCA_001860545.1_ASM186054v1	-	SP62
Escherichia coli P0299917.9	1116055	PRJNA77345	77345	Proteobacteria	Gammaproteobacteria	5.32568	50.5	-	APYS01	195	5796	5292	4/8/13	2/25/17	Contig	IGS	SAMN00829373	GCA_000357505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/505/GCA_000357505.2_ASM35750v2	-	P0299917.9
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39572	65.6	-	MMCX01	6	4264	4102	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919581	GCA_001844045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/045/GCA_001844045.1_ASM184404v1	-	I0002781-8
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.04286	52.1	-	CZOD01	79	5152	4849	10/21/15	3/1/17	Contig	SC	SAMEA2336261	GCA_001410395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/395/GCA_001410395.1_12227_3_10	-	2511STDY5712414
Staphylococcus aureus M1164	1402676	PRJNA220026	220026	Terrabacteria group	Firmicutes	2.91798	32.9	-	JEKH01	84	3107	2937	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360833	GCA_000575325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/325/GCA_000575325.1_Stap_aure_M1164_V1	-	M1164
Staphylococcus aureus M1162	1402674	PRJNA220024	220024	Terrabacteria group	Firmicutes	2.85919	32.8	-	JEKI01	54	3033	2860	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360831	GCA_000575345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/345/GCA_000575345.1_Stap_aure_M1162_V1	-	M1162
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.08943	52	-	CZMI01	79	5229	4890	10/21/15	2/28/17	Contig	SC	SAMEA2336295	GCA_001410415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/415/GCA_001410415.1_12227_3_44	-	2511STDY5712448
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37805	65.6	-	MMCW01	1	4257	4099	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919582	GCA_001844065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/065/GCA_001844065.1_ASM184406v1	-	I0003229-7
Escherichia coli P0301867.11	1116072	PRJNA77379	77379	Proteobacteria	Gammaproteobacteria	5.21477	50.7	-	APYT01	151	5583	5087	4/8/13	2/25/17	Contig	IGS	SAMN00829374	GCA_000357525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/525/GCA_000357525.2_ASM35752v2	-	P0301867.11
Streptococcus pneumoniae	1313	PRJNA315442	315442	Terrabacteria group	Firmicutes	2.0518	39.6	-	MLGJ01	82	2234	2034	11/2/16	3/14/17	Contig	University of Toronto	SAMN04559948	GCA_001860555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/555/GCA_001860555.1_ASM186055v1	-	SP26
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40504	66.4	-	LEHN01	114	6115	5930	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566393	GCA_001035445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/445/GCA_001035445.1_ASM103544v1	-	Pae_CF67.09i
Acinetobacter baumannii	470	PRJNA341407	341407	Proteobacteria	Gammaproteobacteria	4.17104	38.9	-	MTGG01	78	4003	3823	2/13/17	2/22/17	Scaffold	California Department of Public Health	SAMN05721782	GCA_001997285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/285/GCA_001997285.1_ASM199728v1	-	ATCC 17945
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.6509	57.8	-	FLFR01	47	5636	5369	5/19/16	2/25/17	Scaffold	SC	SAMEA2273798	GCA_900085435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/435/GCA_900085435.1_12045_7_28	-	k2254
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.62911	57.2	-	FLFT01	97	5689	5420	5/19/16	2/25/17	Scaffold	SC	SAMEA2273799	GCA_900085445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/445/GCA_900085445.1_12045_7_29	-	k2265
Acinetobacter baumannii	470	PRJNA359388	359388	Proteobacteria	Gammaproteobacteria	3.95537	38.8	-	MSRV01	64	3829	3696	3/27/17	3/30/17	Scaffold	Zhejiang university	SAMN06191490	GCA_002072795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/072/795/GCA_002072795.1_ASM207279v1	-	TDAB1
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40274	66.4	-	LEHO01	93	6127	5940	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566394	GCA_001035465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/465/GCA_001035465.1_ASM103546v1	-	Pae_CF67.09j
Streptococcus pneumoniae	1313	PRJNA315442	315442	Terrabacteria group	Firmicutes	2.09621	39.6	-	MLGW01	88	2309	2088	11/2/16	3/14/17	Contig	University of Toronto	SAMN04559961	GCA_001860565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/565/GCA_001860565.1_ASM186056v1	-	SP143
Escherichia coli P0298942.7	1116144	PRJNA77525	77525	Proteobacteria	Gammaproteobacteria	5.03737	50.5	-	APXX01	217	5523	4931	4/8/13	2/25/17	Contig	IGS	SAMN00829347	GCA_000357545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/545/GCA_000357545.2_ASM35754v2	-	P0298942.7
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38839	65.6	-	MMCV01	3	4263	4107	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919583	GCA_001844085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/085/GCA_001844085.1_ASM184408v1	-	I0002531-7
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.02038	52.1	-	CZLN01	70	5154	4841	10/21/15	2/28/17	Contig	SC	SAMEA1904399	GCA_001410435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/435/GCA_001410435.1_9472_3_25	-	2511STDY5462410
Staphylococcus aureus M1160	1402672	PRJNA220022	220022	Terrabacteria group	Firmicutes	2.9093	32.9	-	JEKJ01	74	3090	2891	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360829	GCA_000575365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/365/GCA_000575365.1_Stap_aure_M1160_V1	-	M1160
Staphylococcus aureus M1159	1402671	PRJNA220021	220021	Terrabacteria group	Firmicutes	2.86389	32.8	-	JEKK01	49	3005	2830	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360828	GCA_000575385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/385/GCA_000575385.1_Stap_aure_M1159_V1	-	M1159
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.16089	52.1	-	CZNM01	79	5285	4973	10/21/15	2/28/17	Contig	SC	SAMEA1904406	GCA_001410455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/455/GCA_001410455.1_9472_3_34	-	2511STDY5462419
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40025	65.6	-	MLZT01	51	4301	4118	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919664	GCA_001844095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/095/GCA_001844095.1_ASM184409v1	-	I0005443-2
Escherichia coli P0298942.8	1116145	PRJNA77527	77527	Proteobacteria	Gammaproteobacteria	4.95542	50.9	-	APXY01	441	5414	4820	4/8/13	2/25/17	Contig	IGS	SAMN00829348	GCA_000357565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/565/GCA_000357565.2_ASM35756v2	-	P0298942.8
Streptococcus pneumoniae	1313	PRJNA315442	315442	Terrabacteria group	Firmicutes	2.01999	39.6	-	MLGX01	71	2207	2005	11/2/16	3/14/17	Contig	University of Toronto	SAMN04559962	GCA_001860575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/575/GCA_001860575.1_ASM186057v1	-	SP168
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40515	66.4	-	LEHP01	141	6114	5926	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566395	GCA_001035485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/485/GCA_001035485.1_ASM103548v1	-	Pae_CF67.09k
Acinetobacter baumannii	470	PRJNA341912	341912	Proteobacteria	Gammaproteobacteria	3.96652	39	-	MIFW01	146	3836	3695	4/14/17	4/21/17	Scaffold	Zhejiang University	SAMN05730164	GCA_002093815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/815/GCA_002093815.1_ASM209381v1	28275586	ZJ06-200P5-1
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.78773	56.6	-	FLFU01	90	5871	5570	5/19/16	2/21/17	Scaffold	SC	SAMEA2273800	GCA_900085455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/455/GCA_900085455.1_12045_7_30	-	k2286
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.87272	56.5	-	FLFV01	116	5987	5668	5/19/16	2/25/17	Scaffold	SC	SAMEA2273801	GCA_900085465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/465/GCA_900085465.1_12045_7_32	-	k2288
Acinetobacter baumannii	470	PRJNA391421	391421	Proteobacteria	Gammaproteobacteria	3.87412	39.3	-	NJIB01	375	3743	3492	8/1/17	8/3/17	Scaffold	Pasteur Institut of Ivory Coast	SAMN07268441	GCA_002238075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/238/075/GCA_002238075.1_ASM223807v1	-	Ab_12
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39389	66.4	-	LEHQ01	132	6132	5876	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566396	GCA_001035495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/495/GCA_001035495.1_ASM103549v1	-	Pae_CF67.09l
Streptococcus pneumoniae	1313	PRJNA315442	315442	Terrabacteria group	Firmicutes	2.01333	39.6	-	MLHB01	88	2187	1972	11/2/16	3/14/17	Contig	University of Toronto	SAMN04559966	GCA_001860625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/625/GCA_001860625.1_ASM186062v1	-	SP194
Escherichia coli P0299438.10	1116045	PRJNA77325	77325	Proteobacteria	Gammaproteobacteria	5.08375	50.5	-	APYA01	103	5407	4985	4/8/13	2/25/17	Contig	IGS	SAMN00829350	GCA_000357585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/585/GCA_000357585.2_ASM35758v2	-	P0299438.10
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40435	65.6	-	MMCU01	13	4284	4116	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919584	GCA_001844105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/105/GCA_001844105.1_ASM184410v1	-	I0003426-9
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.04517	52.1	-	CZOM01	76	5159	4869	10/21/15	2/28/17	Contig	SC	SAMEA2149665	GCA_001410475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/475/GCA_001410475.1_10900_1_32	-	2511STDY5564066
Staphylococcus aureus M1158	1402670	PRJNA220020	220020	Terrabacteria group	Firmicutes	2.84413	32.8	-	JEKL01	49	3013	2841	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360827	GCA_000575405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/405/GCA_000575405.1_Stap_aure_M1158_V1	-	M1158
Staphylococcus aureus M1156	1402668	PRJNA220018	220018	Terrabacteria group	Firmicutes	2.90564	32.9	-	JEKM01	72	3084	2895	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360825	GCA_000575425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/425/GCA_000575425.1_Stap_aure_M1156_V1	-	M1156
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.00642	52.1	-	CZNW01	78	5124	4824	10/21/15	2/28/17	Contig	SC	SAMEA2161684	GCA_001410495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/495/GCA_001410495.1_10868_1_90	-	2511STDY5564063
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38165	65.6	-	MMCT01	7	4263	4099	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919585	GCA_001844145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/145/GCA_001844145.1_ASM184414v1	-	I0002941-8
Escherichia coli P0302308.11	1116159	PRJNA77555	77555	Proteobacteria	Gammaproteobacteria	5.15439	50.7	-	APZA01	140	5471	5040	4/8/13	2/25/17	Contig	IGS	SAMN00829423	GCA_000357605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/605/GCA_000357605.2_ASM35760v2	-	P0302308.11
Streptococcus pneumoniae	1313	PRJNA315442	315442	Terrabacteria group	Firmicutes	2.04915	39.6	-	MLHC01	112	2253	2016	11/2/16	3/14/17	Contig	University of Toronto	SAMN04559967	GCA_001860635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/635/GCA_001860635.1_ASM186063v1	-	SP203
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40367	66.4	-	LEHR01	166	6119	5911	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566397	GCA_001035525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/525/GCA_001035525.1_ASM103552v1	-	Pae_CF67.09m
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	4.08628	38.9	-	NKJL01	160	3997	3847	8/29/17	8/30/17	Scaffold	Hangzhou First People's Hospital	SAMN07251729	GCA_002277145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/145/GCA_002277145.1_ASM227714v1	-	AB173
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.72154	57	-	FLFW01	128	5776	5487	5/19/16	2/25/17	Scaffold	SC	SAMEA2273802	GCA_900085475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/475/GCA_900085475.1_12045_7_33	-	k2290
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.65853	57.1	-	FLGA01	76	5730	5440	5/19/16	2/21/17	Scaffold	SC	SAMEA2273803	GCA_900085485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/485/GCA_900085485.1_12045_7_34	-	k2293
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	4.19635	39.1	-	NKJM01	740	3975	3822	8/29/17	8/30/17	Scaffold	Hangzhou First People's Hospital	SAMN07251728	GCA_002277175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/175/GCA_002277175.1_ASM227717v1	-	AB172
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40353	66.4	-	LEHS01	126	6125	5926	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566398	GCA_001035535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/535/GCA_001035535.1_ASM103553v1	-	Pae_CF67.09n
Streptococcus pneumoniae	1313	PRJNA315442	315442	Terrabacteria group	Firmicutes	2.08494	39.6	-	MLGI01	122	2310	2029	11/2/16	3/14/17	Contig	University of Toronto	SAMN04559947	GCA_001860665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/665/GCA_001860665.1_ASM186066v1	-	SP21
Escherichia coli P0301867.13	1125642	PRJNA78871	78871	Proteobacteria	Gammaproteobacteria	5.21381	50.7	-	APZT01	143	5581	5040	4/8/13	2/24/17	Contig	IGS	SAMN00858017	GCA_000357625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/625/GCA_000357625.2_ASM35762v2	-	P0301867.13
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37682	65.6	-	MMCS01	14	4260	4091	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919586	GCA_001844165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/165/GCA_001844165.1_ASM184416v1	-	C0003944-7
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.04851	52.1	-	CZPG01	76	5180	4874	10/21/15	2/28/17	Contig	SC	SAMEA2336279	GCA_001410515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/515/GCA_001410515.1_12227_3_28	-	2511STDY5712432
Staphylococcus aureus M1153	1402665	PRJNA220015	220015	Terrabacteria group	Firmicutes	2.91472	32.7	-	JEKN01	82	3089	2952	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360822	GCA_000575445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/445/GCA_000575445.1_Stap_aure_M1153_V1	-	M1153
Staphylococcus aureus M1152	1402664	PRJNA220014	220014	Terrabacteria group	Firmicutes	2.92305	32.9	-	JEKO01	74	3109	2930	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360821	GCA_000575465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/465/GCA_000575465.1_Stap_aure_M1152_V1	-	M1152
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.96544	52.1	-	CZNZ01	54	5070	4765	10/21/15	2/28/17	Contig	SC	SAMEA2336253	GCA_001410535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/535/GCA_001410535.1_12227_3_2	-	2511STDY5712406
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.42197	65.6	-	MMCR01	18	4308	4137	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919587	GCA_001844175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/175/GCA_001844175.1_ASM184417v1	-	I0003546-4
Escherichia coli P0301904.3	1125647	PRJNA78881	78881	Proteobacteria	Gammaproteobacteria	5.02221	50.6	-	APZV01	190	5487	4845	4/8/13	5/18/17	Contig	IGS	SAMN00857932	GCA_000357645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/645/GCA_000357645.1_ASM35764v1	-	P0301904.3
Streptococcus pneumoniae	1313	PRJNA315442	315442	Terrabacteria group	Firmicutes	2.03575	39.6	-	MLGL01	76	2239	2021	11/2/16	3/14/17	Contig	University of Toronto	SAMN04559950	GCA_001860705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/705/GCA_001860705.1_ASM186070v1	-	SP30
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40433	66.4	-	LEHT01	141	6116	5929	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566399	GCA_001035565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/565/GCA_001035565.1_ASM103556v1	-	Pae_CF67.09o
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	4.00303	39	-	NKJO01	222	3917	3734	8/29/17	8/30/17	Scaffold	Hangzhou First People's Hospital	SAMN07251726	GCA_002277185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/185/GCA_002277185.1_ASM227718v1	-	AB165
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.64129	57.1	-	FLGB01	67	5689	5437	5/19/16	2/21/17	Scaffold	SC	SAMEA2273804	GCA_900085495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/495/GCA_900085495.1_12045_7_35	-	k2300
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.53702	56.9	-	FLFY01	60	5587	5333	5/19/16	2/25/17	Scaffold	SC	SAMEA2273805	GCA_900085505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/505/GCA_900085505.1_12045_7_36	-	k2311
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	4.02793	39	-	NKJP01	179	3927	3780	8/29/17	8/30/17	Scaffold	Hangzhou First People's Hospital	SAMN07251725	GCA_002277215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/215/GCA_002277215.1_ASM227721v1	-	AB162
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40491	66.4	-	LEHU01	136	6118	5936	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566400	GCA_001035575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/575/GCA_001035575.1_ASM103557v1	-	Pae_CF67.09p
Streptococcus pneumoniae	1313	PRJNA315442	315442	Terrabacteria group	Firmicutes	2.0567	39.6	-	MLGM01	74	2256	2035	11/2/16	3/14/17	Contig	University of Toronto	SAMN04559951	GCA_001860715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/715/GCA_001860715.1_ASM186071v1	-	SP31
Escherichia coli P0302293.7	1125643	PRJNA78873	78873	Proteobacteria	Gammaproteobacteria	5.11703	50.7	-	APZW01	120	5472	5048	4/8/13	2/25/17	Contig	IGS	SAMN00858018	GCA_000357665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/665/GCA_000357665.2_ASM35766v2	-	P0302293.7
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3964	65.6	-	MMCP01	7	4267	4099	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919589	GCA_001844215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/215/GCA_001844215.1_ASM184421v1	-	I0002578-8
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.04523	52.1	-	CZLV01	92	5178	4859	10/21/15	3/1/17	Contig	SC	SAMEA1904393	GCA_001410555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/555/GCA_001410555.1_9472_3_18	-	2511STDY5462403
Staphylococcus aureus M1151	1402663	PRJNA220013	220013	Terrabacteria group	Firmicutes	2.80454	32.8	-	JEKP01	42	2906	2724	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360820	GCA_000575485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/485/GCA_000575485.1_Stap_aure_M1151_V1	-	M1151
Staphylococcus aureus M1149	1402661	PRJNA220011	220011	Terrabacteria group	Firmicutes	2.88574	32.8	-	JEKQ01	55	3055	2891	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360818	GCA_000575505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/505/GCA_000575505.1_Stap_aure_M1149_V1	-	M1149
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.8913	52.1	-	CZLP01	56	4981	4678	10/21/15	2/28/17	Contig	SC	SAMEA2336286	GCA_001410575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/575/GCA_001410575.1_12227_3_35	-	2511STDY5712439
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.403	65.6	-	MMCO01	3	4283	4119	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919590	GCA_001844245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/245/GCA_001844245.1_ASM184424v1	-	I0003172-9
Escherichia coli P0304799.3	1125651	PRJNA78889	78889	Proteobacteria	Gammaproteobacteria	5.31194	50.8	-	APZX01	490	5662	5120	4/8/13	2/25/17	Contig	IGS	SAMN00857935	GCA_000357685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/685/GCA_000357685.2_ASM35768v2	-	P0304799.3
Streptococcus pneumoniae	1313	PRJNA315442	315442	Terrabacteria group	Firmicutes	2.06713	39.7	-	MLGK01	258	2316	1973	11/2/16	3/8/17	Contig	University of Toronto	SAMN04559949	GCA_001860725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/725/GCA_001860725.1_ASM186072v1	-	SP29
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40468	66.4	-	LEHV01	80	6115	5942	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566401	GCA_001035605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/605/GCA_001035605.1_ASM103560v1	-	Pae_CF67.09q
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	4.01842	39	-	NKJQ01	225	3935	3774	8/29/17	8/30/17	Scaffold	Hangzhou First People's Hospital	SAMN07251724	GCA_002277225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/225/GCA_002277225.1_ASM227722v1	-	AB161
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.52349	57.2	-	FLFZ01	57	5582	5283	5/19/16	2/21/17	Scaffold	SC	SAMEA2273807	GCA_900085515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/515/GCA_900085515.1_12045_7_38	-	k2317
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.38696	57.3	-	FLFX01	24	5366	5117	5/19/16	2/21/17	Scaffold	SC	SAMEA2273806	GCA_900085525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/525/GCA_900085525.1_12045_7_37	-	k2316
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	4.13773	39.3	-	NKJS01	403	3987	3823	8/29/17	8/30/17	Scaffold	Hangzhou First People's Hospital	SAMN07251722	GCA_002277235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/235/GCA_002277235.1_ASM227723v1	-	AB147
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40045	66.4	-	LEHW01	238	6133	5880	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566402	GCA_001035625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/625/GCA_001035625.1_ASM103562v1	-	Pae_CF67.09r
Streptococcus pneumoniae	1313	PRJNA315442	315442	Terrabacteria group	Firmicutes	2.06112	39.6	-	MLGN01	97	2270	2050	11/2/16	3/14/17	Contig	University of Toronto	SAMN04559952	GCA_001860735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/735/GCA_001860735.1_ASM186073v1	-	SP42
Escherichia coli P0305260.2	1125645	PRJNA78877	78877	Proteobacteria	Gammaproteobacteria	4.80831	50.8	-	APZY01	121	5130	4599	4/8/13	2/24/17	Contig	IGS	SAMN00858019	GCA_000357705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/705/GCA_000357705.2_ASM35770v2	-	P0305260.2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38919	65.6	-	MMCN01	7	4260	4096	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919591	GCA_001844265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/265/GCA_001844265.1_ASM184426v1	-	I0002457-5
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.98658	52.1	-	CZLR01	56	5109	4789	10/21/15	3/1/17	Contig	SC	SAMEA2336300	GCA_001410595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/595/GCA_001410595.1_12227_3_49	-	2511STDY5712453
Staphylococcus aureus M1148	1402660	PRJNA220010	220010	Terrabacteria group	Firmicutes	2.89164	32.8	-	JEKR01	48	3053	2873	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360817	GCA_000575525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/525/GCA_000575525.1_Stap_aure_M1148_V1	-	M1148
Staphylococcus aureus M1147	1402659	PRJNA220009	220009	Terrabacteria group	Firmicutes	2.90295	32.8	-	JEKS01	77	3080	2907	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360816	GCA_000575545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/545/GCA_000575545.1_Stap_aure_M1147_V1	-	M1147
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.96619	52.1	-	CZOY01	60	5072	4762	10/21/15	2/28/17	Contig	SC	SAMEA2336240	GCA_001410615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/615/GCA_001410615.1_12216_4_51	-	2511STDY5712393
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41334	65.6	-	MMCM01	9	4296	4124	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919592	GCA_001844275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/275/GCA_001844275.1_ASM184427v1	-	I0002958-2
Escherichia coli P0298942.11	1116148	PRJNA77533	77533	Proteobacteria	Gammaproteobacteria	5.09178	50.5	-	APXR01	205	5581	4949	4/8/13	2/22/17	Contig	IGS	SAMN00829341	GCA_000357725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/725/GCA_000357725.1_ASM35772v1	-	P0298942.11
Streptococcus pneumoniae	1313	PRJNA315442	315442	Terrabacteria group	Firmicutes	2.02297	39.6	-	MLGP01	80	2206	1990	11/2/16	3/14/17	Contig	University of Toronto	SAMN04559954	GCA_001860785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/785/GCA_001860785.1_ASM186078v1	-	SP76
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39992	66.4	-	LEHX01	156	6124	5912	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566403	GCA_001035635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/635/GCA_001035635.1_ASM103563v1	-	Pae_CF67.09s
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	4.02896	39	-	NKJT01	128	3944	3782	8/29/17	8/30/17	Scaffold	Hangzhou First People's Hospital	SAMN07251721	GCA_002277275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/275/GCA_002277275.1_ASM227727v1	-	AB134
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.40489	57.2	-	FLGC01	68	5478	5226	5/19/16	2/21/17	Scaffold	SC	SAMEA2273808	GCA_900085535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/535/GCA_900085535.1_12045_7_39	-	k2319
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.4375	57.3	-	FLGD01	29	5502	5250	5/19/16	2/25/17	Scaffold	SC	SAMEA2273809	GCA_900085545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/545/GCA_900085545.1_12045_7_40	-	k2320
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	4.04191	39	-	NKJV01	140	3956	3790	8/29/17	8/30/17	Scaffold	Hangzhou First People's Hospital	SAMN07251719	GCA_002277285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/285/GCA_002277285.1_ASM227728v1	-	AB112
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40515	66.4	-	LEHY01	108	6122	5927	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566404	GCA_001035645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/645/GCA_001035645.1_ASM103564v1	-	Pae_CF67.09t
Streptococcus pneumoniae	1313	PRJNA315442	315442	Terrabacteria group	Firmicutes	2.05182	39.6	-	MLGQ01	85	2236	2021	11/2/16	3/8/17	Contig	University of Toronto	SAMN04559955	GCA_001860795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/795/GCA_001860795.1_ASM186079v1	-	SP78
Escherichia coli P0298942.9	1116146	PRJNA77529	77529	Proteobacteria	Gammaproteobacteria	4.73549	51.4	-	APXZ01	387	5091	4600	4/8/13	5/18/17	Contig	IGS	SAMN00829349	GCA_000357745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/745/GCA_000357745.1_ASM35774v1	-	P0298942.9
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40682	65.6	-	MMCL01	15	4287	4117	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919593	GCA_001844295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/295/GCA_001844295.1_ASM184429v1	-	I0003452-5
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.00421	52.1	-	CZOV01	78	5119	4808	10/21/15	3/1/17	Contig	SC	SAMEA2336233	GCA_001410635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/635/GCA_001410635.1_12216_4_44	-	2511STDY5712386
Staphylococcus aureus M1146	1402658	PRJNA220008	220008	Terrabacteria group	Firmicutes	2.8809	32.9	-	JEKT01	54	3023	2840	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360815	GCA_000575565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/565/GCA_000575565.1_Stap_aure_M1146_V1	-	M1146
Staphylococcus aureus M1144	1402656	PRJNA220006	220006	Terrabacteria group	Firmicutes	2.92025	32.9	-	JEKU01	75	3100	2904	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360813	GCA_000575585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/585/GCA_000575585.1_Stap_aure_M1144_V1	-	M1144
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.22628	52	-	CZLJ01	59	5407	5088	10/21/15	2/28/17	Contig	SC	SAMEA2336292	GCA_001410655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/655/GCA_001410655.1_12227_3_41	-	2511STDY5712445
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39017	65.6	-	MMCK01	7	4270	4097	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919594	GCA_001844325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/325/GCA_001844325.1_ASM184432v1	-	I0003578-7
Escherichia coli P0302308.2	1116154	PRJNA77545	77545	Proteobacteria	Gammaproteobacteria	5.19143	50.7	-	APZE01	142	5528	5085	4/8/13	2/25/17	Contig	IGS	SAMN00829427	GCA_000357765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/765/GCA_000357765.2_ASM35776v2	-	P0302308.2
Streptococcus pneumoniae	1313	PRJNA315442	315442	Terrabacteria group	Firmicutes	2.05652	39.5	-	MLGR01	110	2256	2020	11/2/16	3/14/17	Contig	University of Toronto	SAMN04559956	GCA_001860815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/815/GCA_001860815.1_ASM186081v1	-	SP80
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.41145	66.4	-	LEHZ01	128	6124	5912	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566405	GCA_001035685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/685/GCA_001035685.1_ASM103568v1	-	Pae_CF67.10a
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	4.0896	39	-	NKJU01	214	3996	3816	8/29/17	8/30/17	Scaffold	Hangzhou First People's Hospital	SAMN07251720	GCA_002277315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/315/GCA_002277315.1_ASM227731v1	-	AB118
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.40627	57.3	-	FLGE01	53	5390	5153	5/19/16	2/21/17	Scaffold	SC	SAMEA2273810	GCA_900085555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/555/GCA_900085555.1_12045_7_41	-	k2325
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.87438	56.7	-	FLGH01	66	5995	5703	5/19/16	2/21/17	Scaffold	SC	SAMEA2273811	GCA_900085565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/565/GCA_900085565.1_12045_7_42	-	k2328
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	4.0599	38.9	-	NKJW01	171	3968	3808	8/29/17	8/30/17	Scaffold	Hangzhou First People's Hospital	SAMN07251718	GCA_002277325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/325/GCA_002277325.1_ASM227732v1	-	AB108
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39926	66.4	-	LEIA01	112	6122	5915	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566406	GCA_001035705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/705/GCA_001035705.1_ASM103570v1	-	Pae_CF67.10b
Streptococcus pneumoniae	1313	PRJNA315442	315442	Terrabacteria group	Firmicutes	2.09173	39.6	-	MLGS01	103	2302	2096	11/2/16	3/14/17	Contig	University of Toronto	SAMN04559957	GCA_001860825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/825/GCA_001860825.1_ASM186082v1	-	SP100
Escherichia coli P0302308.3	1116155	PRJNA77547	77547	Proteobacteria	Gammaproteobacteria	5.14201	50.7	-	APZF01	130	5471	5027	4/8/13	2/24/17	Contig	IGS	SAMN00829429	GCA_000357785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/785/GCA_000357785.2_ASM35778v2	-	P0302308.3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38245	65.6	-	MMCJ01	4	4259	4089	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919595	GCA_001844345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/345/GCA_001844345.1_ASM184434v1	-	I0003584-5
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.88342	52.1	-	CZPH01	50	4965	4674	10/21/15	2/28/17	Contig	SC	SAMEA2336270	GCA_001410675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/675/GCA_001410675.1_12227_3_19	-	2511STDY5712423
Staphylococcus aureus M1141	1402654	PRJNA220004	220004	Terrabacteria group	Firmicutes	2.87943	32.8	-	JEKV01	53	3052	2889	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360811	GCA_000575605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/605/GCA_000575605.1_Stap_aure_M1141_V1	-	M1141
Staphylococcus aureus M1140	1402653	PRJNA220003	220003	Terrabacteria group	Firmicutes	2.85187	32.8	-	JEKW01	61	3027	2859	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360810	GCA_000575625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/625/GCA_000575625.1_Stap_aure_M1140_V1	-	M1140
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.00757	52.1	-	CZLK01	56	5128	4836	10/21/15	3/1/17	Contig	SC	SAMEA2336297	GCA_001410695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/695/GCA_001410695.1_12227_3_46	-	2511STDY5712450
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39678	65.6	-	MMCH01	9	4279	4110	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919597	GCA_001844355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/355/GCA_001844355.1_ASM184435v1	-	I0002615-8
Escherichia coli P0302308.4	1116156	PRJNA77549	77549	Proteobacteria	Gammaproteobacteria	5.15295	50.7	-	APZG01	402	5582	5097	4/8/13	5/18/17	Contig	IGS	SAMN00829431	GCA_000357805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/805/GCA_000357805.1_ASM35780v1	-	P0302308.4
Streptococcus pneumoniae	1313	PRJNA315442	315442	Terrabacteria group	Firmicutes	2.06381	39.5	-	MLGT01	87	2269	2042	11/2/16	3/14/17	Contig	University of Toronto	SAMN04559958	GCA_001860865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/865/GCA_001860865.1_ASM186086v1	-	SP109
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40169	66.4	-	LEIB01	104	6113	5927	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566407	GCA_001035715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/715/GCA_001035715.1_ASM103571v1	-	Pae_CF67.10c
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	4.0725	39.1	-	NKJY01	242	3979	3811	8/29/17	8/30/17	Scaffold	Hangzhou First People's Hospital	SAMN07251716	GCA_002277355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/355/GCA_002277355.1_ASM227735v1	-	AB100
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.57843	57.1	-	FLGG01	61	5583	5304	5/19/16	2/21/17	Scaffold	SC	SAMEA2273812	GCA_900085575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/575/GCA_900085575.1_12045_7_44	-	k2329
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.36729	57.3	-	FLGF01	32	5405	5162	5/19/16	2/21/17	Scaffold	SC	SAMEA2273813	GCA_900085585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/585/GCA_900085585.1_12045_7_45	-	k2330
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	4.01092	39	-	NKJZ01	200	3933	3750	8/29/17	8/30/17	Scaffold	Hangzhou First People's Hospital	SAMN07251715	GCA_002277365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/365/GCA_002277365.1_ASM227736v1	-	AB99
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40328	66.4	-	LEIC01	152	6114	5928	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566408	GCA_001035725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/725/GCA_001035725.1_ASM103572v1	-	Pae_CF67.10d
Streptococcus pneumoniae	1313	PRJNA315442	315442	Terrabacteria group	Firmicutes	2.06131	39.6	-	MLGU01	87	2265	2040	11/2/16	3/14/17	Contig	University of Toronto	SAMN04559959	GCA_001860885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/885/GCA_001860885.1_ASM186088v1	-	SP126
Escherichia coli P0302308.5	1116157	PRJNA77551	77551	Proteobacteria	Gammaproteobacteria	5.14688	50.7	-	APZH01	132	5467	5043	4/8/13	2/25/17	Contig	IGS	SAMN00829432	GCA_000357825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/825/GCA_000357825.2_ASM35782v2	-	P0302308.5
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40707	65.6	-	MMCI01	7	4283	4116	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919596	GCA_001844385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/385/GCA_001844385.1_ASM184438v1	-	I0000779-4
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.00541	52.1	-	CZMV01	72	5127	4820	10/21/15	3/1/17	Contig	SC	SAMEA1904402	GCA_001410715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/715/GCA_001410715.1_9472_3_27	-	2511STDY5462412
Staphylococcus aureus M1139	1402652	PRJNA220002	220002	Terrabacteria group	Firmicutes	2.89629	32.8	-	JEKX01	60	3070	2902	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360809	GCA_000575645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/645/GCA_000575645.1_Stap_aure_M1139_V1	-	M1139
Staphylococcus aureus M1138	1402651	PRJNA220001	220001	Terrabacteria group	Firmicutes	2.87315	32.8	-	JEKY01	39	3029	2865	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360808	GCA_000575665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/665/GCA_000575665.1_Stap_aure_M1138_V1	-	M1138
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.86503	52.2	-	CZPQ01	47	4968	4674	10/21/15	3/1/17	Contig	SC	SAMEA2336283	GCA_001410735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/735/GCA_001410735.1_12227_3_32	-	2511STDY5712436
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41042	65.6	-	MMCG01	13	4290	4119	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919598	GCA_001844395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/395/GCA_001844395.1_ASM184439v1	-	C0004852-1
Escherichia coli P0304816.6	1116182	PRJNA77601	77601	Proteobacteria	Gammaproteobacteria	5.29934	50.5	-	AQBD01	163	5636	5091	4/8/13	2/25/17	Contig	IGS	SAMN00829515	GCA_000357845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/845/GCA_000357845.2_ASM35784v2	-	P0304816.6
Streptococcus pneumoniae	1313	PRJNA315442	315442	Terrabacteria group	Firmicutes	2.05479	39.5	-	MLGY01	72	2257	2035	11/2/16	3/14/17	Contig	University of Toronto	SAMN04559963	GCA_001860895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/895/GCA_001860895.1_ASM186089v1	-	SP174
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40304	66.4	-	LEID01	153	6112	5913	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566409	GCA_001035765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/765/GCA_001035765.1_ASM103576v1	-	Pae_CF67.10e
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	4.01956	39	-	NKKB01	162	3930	3782	8/29/17	8/30/17	Scaffold	Hangzhou First People's Hospital	SAMN07251713	GCA_002277385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/385/GCA_002277385.1_ASM227738v1	-	AB91
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.40752	57.4	-	FLGI01	43	5366	5122	5/21/16	2/21/17	Scaffold	SC	SAMEA2273814	GCA_900085595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/595/GCA_900085595.1_12045_7_46	-	k2334
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.47109	57.2	-	FLGJ01	45	5463	5223	5/19/16	2/21/17	Scaffold	SC	SAMEA2273815	GCA_900085605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/605/GCA_900085605.1_12045_7_47	-	k2335
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	4.01281	39	-	NKKA01	202	3912	3765	8/29/17	8/30/17	Scaffold	Hangzhou First People's Hospital	SAMN07251714	GCA_002277405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/405/GCA_002277405.1_ASM227740v1	-	AB96
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40107	66.4	-	LEIE01	168	6122	5914	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566410	GCA_001035785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/785/GCA_001035785.1_ASM103578v1	-	Pae_CF67.10f
Streptococcus pneumoniae	1313	PRJNA315442	315442	Terrabacteria group	Firmicutes	2.05289	39.6	-	MLGV01	69	2242	2028	11/2/16	3/8/17	Contig	University of Toronto	SAMN04559960	GCA_001860905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/905/GCA_001860905.1_ASM186090v1	-	SP136
Escherichia coli P0304816.7	1116183	PRJNA77603	77603	Proteobacteria	Gammaproteobacteria	5.28739	50.5	-	AQBE01	178	5635	5177	4/8/13	2/24/17	Contig	IGS	SAMN00829516	GCA_000357865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/865/GCA_000357865.2_ASM35786v2	-	P0304816.7
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40692	65.6	-	MMCE01	12	4290	4133	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919600	GCA_001844425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/425/GCA_001844425.1_ASM184442v1	-	I0003380-8
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.02026	52.1	-	CZOJ01	67	5161	4852	10/21/15	2/28/17	Contig	SC	SAMEA2336243	GCA_001410755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/755/GCA_001410755.1_12216_4_54	-	2511STDY5712396
Staphylococcus aureus M1137	1402650	PRJNA220000	220000	Terrabacteria group	Firmicutes	2.90178	32.9	-	JEKZ01	27	3057	2891	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360807	GCA_000575685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/685/GCA_000575685.1_Stap_aure_M1137_V1	-	M1137
Staphylococcus aureus M1136	1402649	PRJNA219999	219999	Terrabacteria group	Firmicutes	2.9163	32.9	-	JELA01	78	3098	2912	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360806	GCA_000575705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/705/GCA_000575705.1_Stap_aure_M1136_V1	-	M1136
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.94444	52.1	-	CZPE01	74	5083	4792	10/21/15	2/28/17	Contig	SC	SAMEA2336235	GCA_001410775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/775/GCA_001410775.1_12216_4_46	-	2511STDY5712388
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39929	65.6	-	MMCF01	7	4268	4098	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919599	GCA_001844435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/435/GCA_001844435.1_ASM184443v1	-	I0002935-0
Escherichia coli P0304816.8	1116184	PRJNA77605	77605	Proteobacteria	Gammaproteobacteria	5.21483	50.4	-	AQBF01	160	5552	5120	4/8/13	2/25/17	Contig	IGS	SAMN00829517	GCA_000357885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/885/GCA_000357885.2_ASM35788v2	-	P0304816.8
Streptococcus pneumoniae	1313	PRJNA315442	315442	Terrabacteria group	Firmicutes	2.02757	39.6	-	MLGZ01	52	2214	2000	11/2/16	3/14/17	Contig	University of Toronto	SAMN04559964	GCA_001860945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/945/GCA_001860945.1_ASM186094v1	-	SP185
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40404	66.4	-	LEIF01	95	6118	5932	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566411	GCA_001035795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/795/GCA_001035795.1_ASM103579v1	-	Pae_CF67.10g
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	3.99763	39	-	NKKC01	153	3908	3758	8/29/17	8/30/17	Scaffold	Hangzhou First People's Hospital	SAMN07251712	GCA_002277435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/435/GCA_002277435.1_ASM227743v1	-	AB89
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.32765	57.4	-	FLGL01	46	5346	5105	5/19/16	2/21/17	Scaffold	SC	SAMEA2273816	GCA_900085615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/615/GCA_900085615.1_12045_7_48	-	k2336
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.43136	57.4	-	FLGK01	37	5432	5184	5/19/16	2/21/17	Scaffold	SC	SAMEA2273818	GCA_900085625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/625/GCA_900085625.1_12045_7_50	-	k2362
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	4.02485	39	-	NKKD01	148	3930	3773	8/29/17	8/30/17	Scaffold	Hangzhou First People's Hospital	SAMN07251711	GCA_002277445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/445/GCA_002277445.1_ASM227744v1	-	AB88
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40635	66.4	-	LEIG01	108	6108	5936	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566412	GCA_001035805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/805/GCA_001035805.1_ASM103580v1	-	Pae_CF67.10h
Streptococcus pneumoniae	1313	PRJNA315442	315442	Terrabacteria group	Firmicutes	2.06799	39.6	-	MLHD01	94	2272	2051	11/2/16	3/14/17	Contig	University of Toronto	SAMN04559968	GCA_001860955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/955/GCA_001860955.1_ASM186095v1	-	SP210
Escherichia coli P0304816.9	1116185	PRJNA77607	77607	Proteobacteria	Gammaproteobacteria	5.19128	50.4	-	AQBG01	193	5585	5105	4/8/13	2/25/17	Contig	IGS	SAMN00829518	GCA_000357905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/905/GCA_000357905.2_ASM35790v2	-	P0304816.9
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40371	65.6	-	MMCC01	27	4293	4115	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919602	GCA_001844475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/475/GCA_001844475.1_ASM184447v1	-	I0001815-5
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.03999	52.1	-	CZNG01	69	5189	4878	10/21/15	2/28/17	Contig	SC	SAMEA1904409	GCA_001410795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/795/GCA_001410795.1_9472_3_33	-	2511STDY5462418
Staphylococcus aureus M1132	1402646	PRJNA219996	219996	Terrabacteria group	Firmicutes	2.89211	32.7	-	JELB01	78	3078	2939	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360803	GCA_000575725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/725/GCA_000575725.1_Stap_aure_M1132_V1	-	M1132
Staphylococcus aureus M1130	1402644	PRJNA219994	219994	Terrabacteria group	Firmicutes	2.91556	32.9	-	JELC01	18	3062	2879	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360801	GCA_000575745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/745/GCA_000575745.1_Stap_aure_M1130_V1	-	M1130
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.04492	52.2	-	CZNR01	177	5131	4838	10/21/15	3/1/17	Contig	SC	SAMEA2151670	GCA_001410815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/815/GCA_001410815.1_10868_1_91	-	2511STDY5564064
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38246	65.6	-	MMCA01	21	4270	4092	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919604	GCA_001844525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/525/GCA_001844525.1_ASM184452v1	-	I0001852-8
Escherichia coli P0305260.10	1116084	PRJNA77403	77403	Proteobacteria	Gammaproteobacteria	4.81931	50.8	-	AQBH01	121	5156	4653	4/8/13	2/25/17	Contig	IGS	SAMN00829519	GCA_000357925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/925/GCA_000357925.2_ASM35792v2	-	P0305260.10
Streptococcus pneumoniae	1313	PRJNA315442	315442	Terrabacteria group	Firmicutes	2.06275	39.5	-	MLHA01	102	2260	2037	11/2/16	3/14/17	Contig	University of Toronto	SAMN04559965	GCA_001860965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/965/GCA_001860965.1_ASM186096v1	-	SP188
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40317	66.4	-	LEIH01	140	6114	5920	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566413	GCA_001035845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/845/GCA_001035845.1_ASM103584v1	-	Pae_CF67.10i
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	4.48521	40	-	NKKF01	1350	4137	3929	8/29/17	8/30/17	Scaffold	Hangzhou First People's Hospital	SAMN07251709	GCA_002277455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/455/GCA_002277455.1_ASM227745v1	-	AB79
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.59134	57.2	-	FLGM01	54	5620	5372	5/19/16	2/21/17	Scaffold	SC	SAMEA2273819	GCA_900085635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/635/GCA_900085635.1_12045_7_51	-	k2364
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.32919	57.4	-	FLGN01	52	5327	5093	5/19/16	2/25/17	Scaffold	SC	SAMEA2273821	GCA_900085645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/645/GCA_900085645.1_12045_7_53	-	k2372
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	4.04568	38.9	-	NKKK01	117	3957	3809	8/29/17	8/30/17	Scaffold	Hangzhou First People's Hospital	SAMN07251704	GCA_002277485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/485/GCA_002277485.1_ASM227748v1	-	AB56
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39914	66.4	-	LEII01	124	6129	5924	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566414	GCA_001035865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/865/GCA_001035865.1_ASM103586v1	-	Pae_CF67.10j
Streptococcus pneumoniae	1313	PRJNA315442	315442	Terrabacteria group	Firmicutes	2.05279	39.6	-	MLHE01	111	2251	2020	11/2/16	3/14/17	Contig	University of Toronto	SAMN04559969	GCA_001860995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/995/GCA_001860995.1_ASM186099v1	-	SP215
Escherichia coli P0305260.11	1116085	PRJNA77405	77405	Proteobacteria	Gammaproteobacteria	4.8161	50.8	-	AQBI01	127	5121	4611	4/8/13	2/25/17	Contig	IGS	SAMN00829521	GCA_000357945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/945/GCA_000357945.2_ASM35794v2	-	P0305260.11
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38152	65.6	-	MMBZ01	1	4263	4099	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919605	GCA_001844535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/535/GCA_001844535.1_ASM184453v1	-	I0002987-1
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.93556	52.1	-	CZLX01	66	5072	4749	10/21/15	3/1/17	Contig	SC	SAMEA1904375	GCA_001410835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/835/GCA_001410835.1_9472_3_1	-	2511STDY5462386
Staphylococcus aureus M1129	1402643	PRJNA219993	219993	Terrabacteria group	Firmicutes	2.91935	32.9	-	JELD01	28	3076	2907	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360800	GCA_000575765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/765/GCA_000575765.1_Stap_aure_M1129_V1	-	M1129
Staphylococcus aureus M1128	1402642	PRJNA219992	219992	Terrabacteria group	Firmicutes	2.86348	32.8	-	JELE01	47	3017	2851	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360799	GCA_000575785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/785/GCA_000575785.1_Stap_aure_M1128_V1	-	M1128
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.10121	52.1	-	CZNP01	59	5209	4911	10/21/15	3/1/17	Contig	SC	SAMEA2336276	GCA_001410855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/855/GCA_001410855.1_12227_3_25	-	2511STDY5712429
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37767	65.6	-	MMBY01	7	4260	4097	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919606	GCA_001844545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/545/GCA_001844545.1_ASM184454v1	-	I0003461-6
Escherichia coli P0305260.12	1116086	PRJNA77407	77407	Proteobacteria	Gammaproteobacteria	4.80143	50.8	-	AQBJ01	123	5104	4626	4/8/13	2/24/17	Contig	IGS	SAMN00829520	GCA_000357965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/965/GCA_000357965.2_ASM35796v2	-	P0305260.12
Streptococcus pneumoniae	1313	PRJNA315442	315442	Terrabacteria group	Firmicutes	2.05568	39.5	-	MLHF01	84	2262	2036	11/2/16	3/14/17	Contig	University of Toronto	SAMN04559970	GCA_001861025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/861/025/GCA_001861025.1_ASM186102v1	-	SP226
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.4035	66.4	-	LEIJ01	175	6106	5914	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566415	GCA_001035875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/875/GCA_001035875.1_ASM103587v1	-	Pae_CF67.10k
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	4.051	39.1	-	NKKL01	239	3954	3774	8/29/17	8/30/17	Scaffold	Hangzhou First People's Hospital	SAMN07251703	GCA_002277505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/505/GCA_002277505.1_ASM227750v1	-	AB54
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.78127	56.7	-	FLGO01	98	5920	5586	5/19/16	2/21/17	Scaffold	SC	SAMEA2273822	GCA_900085655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/655/GCA_900085655.1_12045_7_54	-	k2394
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.61199	57.1	-	FLGP01	129	5701	5394	5/19/16	2/21/17	Scaffold	SC	SAMEA2273820	GCA_900085665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/665/GCA_900085665.1_12045_7_52	-	k2370
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	4.04451	38.9	-	NKKN01	202	3967	3786	8/29/17	8/30/17	Scaffold	Hangzhou First People's Hospital	SAMN07251701	GCA_002277515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/515/GCA_002277515.1_ASM227751v1	-	AB46
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40465	66.4	-	LEIK01	119	6102	5932	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566416	GCA_001035885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/885/GCA_001035885.1_ASM103588v1	-	Pae_CF67.10l
Streptococcus pneumoniae	1313	PRJNA339372	339372	Terrabacteria group	Firmicutes	2.09475	40	-	MDYY01	152	2330	2068	11/7/16	3/14/17	Contig	National Institute for Communicable Diseases	SAMN04337335	GCA_001870545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/545/GCA_001870545.1_ASM187054v1	-	37650
Escherichia coli P0305260.13	1116087	PRJNA77409	77409	Proteobacteria	Gammaproteobacteria	4.83457	50.9	-	AQBK01	124	5139	4634	4/8/13	2/24/17	Contig	IGS	SAMN00829523	GCA_000357985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/357/985/GCA_000357985.2_ASM35798v2	-	P0305260.13
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40287	65.6	-	MMBX01	28	4279	4115	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919607	GCA_001844585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/585/GCA_001844585.1_ASM184458v1	-	I0003766-8
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.06866	52.1	-	CZMJ01	56	5164	4864	10/21/15	2/28/17	Contig	SC	SAMEA2336285	GCA_001410875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/875/GCA_001410875.1_12227_3_34	-	2511STDY5712438
Staphylococcus aureus M1127	1402641	PRJNA219991	219991	Terrabacteria group	Firmicutes	2.85701	32.8	-	JELF01	37	3018	2852	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360798	GCA_000575805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/805/GCA_000575805.1_Stap_aure_M1127_V1	-	M1127
Staphylococcus aureus M1124	1402639	PRJNA219989	219989	Terrabacteria group	Firmicutes	2.91881	32.7	-	JELG01	73	3103	2962	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360796	GCA_000575825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/825/GCA_000575825.1_Stap_aure_M1124_V1	-	M1124
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.9475	52.1	-	CZPI01	64	5050	4739	10/21/15	2/28/17	Contig	SC	SAMEA2336284	GCA_001410895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/895/GCA_001410895.1_12227_3_33	-	2511STDY5712437
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40258	65.6	-	MMBV01	8	4279	4134	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919609	GCA_001844605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/605/GCA_001844605.1_ASM184460v1	-	I0002995-4
Escherichia coli P0305260.15	1116088	PRJNA77411	77411	Proteobacteria	Gammaproteobacteria	4.82812	50.8	-	AQBL01	121	5139	4678	4/8/13	2/24/17	Contig	IGS	SAMN00829524	GCA_000358005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/005/GCA_000358005.2_ASM35800v2	-	P0305260.15
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	1.91782	39.8	-	MRVO01	131	2134	1907	12/19/16	3/6/17	Contig	JCVI	SAMN05774336	GCA_001909205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/205/GCA_001909205.1_ASM190920v1	-	MMC_E02
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.41123	66.4	-	LEIL01	123	6119	5945	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566417	GCA_001035925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/925/GCA_001035925.1_ASM103592v1	-	Pae_CF67.10m
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	4.07185	38.9	-	NKJK01	113	3995	3838	8/29/17	8/30/17	Scaffold	Hangzhou First People's Hospital	SAMN07251730	GCA_002277535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/535/GCA_002277535.1_ASM227753v1	-	AB174
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.49144	57.2	-	FLGQ01	32	5533	5276	5/19/16	2/21/17	Scaffold	SC	SAMEA2273823	GCA_900085675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/675/GCA_900085675.1_12045_7_55	-	k2400
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.1969	57.6	-	FLGR01	26	5166	4947	5/19/16	2/21/17	Scaffold	SC	SAMEA2273848	GCA_900085685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/685/GCA_900085685.1_12045_7_80	-	k2721
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	4.11074	38.9	-	NKJN01	200	4022	3860	8/29/17	8/30/17	Scaffold	Hangzhou First People's Hospital	SAMN07251727	GCA_002277575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/575/GCA_002277575.1_ASM227757v1	-	AB166
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.4028	66.4	-	LEIM01	152	6113	5917	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566418	GCA_001035945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/945/GCA_001035945.1_ASM103594v1	-	Pae_CF67.10n
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	1.92716	39.8	-	MRVP01	126	2116	1927	12/19/16	3/14/17	Contig	JCVI	SAMN05774337	GCA_001909215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/215/GCA_001909215.1_ASM190921v1	-	MMC_E03
Escherichia coli P0305260.3	1116192	PRJNA77621	77621	Proteobacteria	Gammaproteobacteria	4.85999	50.8	-	AQBM01	174	5158	4691	4/8/13	2/24/17	Contig	IGS	SAMN00829525	GCA_000358025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/025/GCA_000358025.2_ASM35802v2	-	P0305260.3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39971	65.6	-	MMBW01	29	4291	4119	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919608	GCA_001844615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/615/GCA_001844615.1_ASM184461v1	-	I0002745-3
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.09076	52.1	-	CZNQ01	83	5225	4919	10/21/15	2/28/17	Contig	SC	SAMEA2336246	GCA_001410915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/915/GCA_001410915.1_12216_4_57	-	2511STDY5712399
Staphylococcus aureus M1122	1402637	PRJNA219987	219987	Terrabacteria group	Firmicutes	2.81929	32.8	-	JELH01	37	2961	2800	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360794	GCA_000575845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/845/GCA_000575845.1_Stap_aure_M1122_V1	-	M1122
Staphylococcus aureus M1121	1402636	PRJNA219986	219986	Terrabacteria group	Firmicutes	2.8495	32.8	-	JELI01	42	3004	2846	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360793	GCA_000575865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/865/GCA_000575865.1_Stap_aure_M1121_V1	-	M1121
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.04262	52.1	-	CZNH01	75	5194	4876	10/21/15	2/28/17	Contig	SC	SAMEA1904379	GCA_001410935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/935/GCA_001410935.1_9472_3_5	-	2511STDY5462390
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37595	65.6	-	MMBU01	4	4259	4092	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919610	GCA_001844625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/625/GCA_001844625.1_ASM184462v1	-	I0003020-0
Escherichia coli P0305260.4	1116193	PRJNA77623	77623	Proteobacteria	Gammaproteobacteria	4.84529	50.8	-	AQBN01	138	5153	4669	4/8/13	2/24/17	Contig	IGS	SAMN00829526	GCA_000358045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/045/GCA_000358045.2_ASM35804v2	-	P0305260.4
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	1.92305	39.8	-	MRVQ01	112	2116	1902	12/19/16	3/6/17	Contig	JCVI	SAMN05774313	GCA_001909225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/225/GCA_001909225.1_ASM190922v1	-	MMC_B03
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40521	66.4	-	LEIN01	117	6114	5930	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566419	GCA_001035955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/955/GCA_001035955.1_ASM103595v1	-	Pae_CF67.10o
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	4.03483	39.1	-	NKJR01	249	3937	3772	8/29/17	8/30/17	Scaffold	Hangzhou First People's Hospital	SAMN07251723	GCA_002277585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/585/GCA_002277585.1_ASM227758v1	-	AB156
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.48344	57.3	-	FLGS01	63	5467	5207	5/19/16	2/21/17	Scaffold	SC	SAMEA2273847	GCA_900085695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/695/GCA_900085695.1_12045_7_79	-	k2708
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.32934	57.3	-	FLGT01	66	5317	5049	5/19/16	2/21/17	Scaffold	SC	SAMEA2273833	GCA_900085705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/705/GCA_900085705.1_12045_7_65	-	k2500
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	4.06105	38.9	-	NKJX01	149	3968	3817	8/29/17	8/30/17	Scaffold	Hangzhou First People's Hospital	SAMN07251717	GCA_002277605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/605/GCA_002277605.1_ASM227760v1	-	AB101
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40334	66.4	-	LEIO01	196	6117	5896	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566420	GCA_001035975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/035/975/GCA_001035975.1_ASM103597v1	-	Pae_CF67.10p
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	1.93582	39.8	-	MRVN01	101	2118	1923	12/19/16	3/14/17	Contig	JCVI	SAMN05774330	GCA_001909235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/235/GCA_001909235.1_ASM190923v1	-	MMC_D04
Escherichia coli P0305260.5	1116194	PRJNA77625	77625	Proteobacteria	Gammaproteobacteria	4.84824	50.8	-	AQBO01	176	5158	4695	4/8/13	2/24/17	Contig	IGS	SAMN00829528	GCA_000358065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/065/GCA_000358065.2_ASM35806v2	-	P0305260.5
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38855	65.6	-	MLZU01	6	4264	4094	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919663	GCA_001844655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/655/GCA_001844655.1_ASM184465v1	-	I0003636-3
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.04494	52.1	-	CZOW01	97	5173	4873	10/21/15	3/1/17	Contig	SC	SAMEA2151809	GCA_001410955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/955/GCA_001410955.1_10868_1_89	-	2511STDY5564062
Staphylococcus aureus M1120	1402635	PRJNA219985	219985	Terrabacteria group	Firmicutes	2.90674	32.9	-	JELJ01	80	3101	2926	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360792	GCA_000575885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/885/GCA_000575885.1_Stap_aure_M1120_V1	-	M1120
Staphylococcus aureus M1117	1402634	PRJNA219984	219984	Terrabacteria group	Firmicutes	2.85878	32.8	-	JELK01	64	3030	2856	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360791	GCA_000575905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/905/GCA_000575905.1_Stap_aure_M1117_V1	-	M1117
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.94503	52	-	CZPP01	49	5052	4762	10/21/15	2/28/17	Contig	SC	SAMEA2336251	GCA_001410975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/975/GCA_001410975.1_12216_4_62	-	2511STDY5712404
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41387	65.6	-	MLZZ01	20	4293	4119	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919658	GCA_001844685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/685/GCA_001844685.1_ASM184468v1	-	I0004741-0
Escherichia coli P0305260.6	1116080	PRJNA77395	77395	Proteobacteria	Gammaproteobacteria	4.81171	50.9	-	AQBP01	144	5125	4657	4/8/13	2/24/17	Contig	IGS	SAMN00829529	GCA_000358085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/085/GCA_000358085.2_ASM35808v2	-	P0305260.6
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	1.96026	39.8	-	MQSC01	69	2185	1939	12/20/16	3/6/17	Contig	JCVI	SAMN05774320	GCA_001909345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/345/GCA_001909345.1_ASM190934v1	-	MMC_C02
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40647	66.4	-	LEIP01	85	6126	5949	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566421	GCA_001036005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/005/GCA_001036005.1_ASM103600v1	-	Pae_CF67.10q
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	4.09017	39.2	-	NKKE01	308	3960	3797	8/29/17	8/30/17	Scaffold	Hangzhou First People's Hospital	SAMN07251710	GCA_002277635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/635/GCA_002277635.1_ASM227763v1	-	AB81
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.6405	57	-	FLGU01	54	5609	5344	5/19/16	2/21/17	Scaffold	SC	SAMEA2273849	GCA_900085715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/715/GCA_900085715.1_12045_7_81	-	k2728
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.39151	57.3	-	FLGV01	46	5351	5112	5/19/16	2/21/17	Scaffold	SC	SAMEA2273850	GCA_900085725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/725/GCA_900085725.1_12045_7_82	-	k2729
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	4.61912	42.5	-	NKKG01	1805	5329	5187	8/29/17	8/29/17	Scaffold	Hangzhou First People's Hospital	SAMN07251708	GCA_002277645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/645/GCA_002277645.1_ASM227764v1	-	AB75
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.4006	66.4	-	LEIQ01	135	6108	5927	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566422	GCA_001036025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/025/GCA_001036025.1_ASM103602v1	-	Pae_CF67.10r
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	2.01747	39.6	-	MQSJ01	86	2238	2006	12/20/16	3/14/17	Contig	JCVI	SAMN05774327	GCA_001909355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/355/GCA_001909355.1_ASM190935v1	-	MMC_D01
Escherichia coli P0305260.7	1116081	PRJNA77397	77397	Proteobacteria	Gammaproteobacteria	4.8339	50.8	-	AQBQ01	131	5153	4670	4/8/13	2/24/17	Contig	IGS	SAMN00829531	GCA_000358105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/105/GCA_000358105.2_ASM35810v2	-	P0305260.7
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39905	65.6	-	MMBT01	12	4274	4111	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919611	GCA_001844695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/695/GCA_001844695.1_ASM184469v1	-	I0003090-3
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.03884	52.1	-	CZOK01	67	5162	4867	10/21/15	2/28/17	Contig	SC	SAMEA2336277	GCA_001410995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/410/995/GCA_001410995.1_12227_3_26	-	2511STDY5712430
Staphylococcus aureus M1116	1402633	PRJNA219983	219983	Terrabacteria group	Firmicutes	2.88564	32.8	-	JELL01	61	3055	2869	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360790	GCA_000575925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/925/GCA_000575925.1_Stap_aure_M1116_V1	-	M1116
Staphylococcus aureus M1113	1402630	PRJNA219980	219980	Terrabacteria group	Firmicutes	2.85416	32.8	-	JELM01	46	3009	2829	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360787	GCA_000575945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/945/GCA_000575945.1_Stap_aure_M1113_V1	-	M1113
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.93494	52.1	-	CZMQ01	54	5015	4714	10/21/15	2/28/17	Contig	SC	SAMEA1904397	GCA_001411015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/015/GCA_001411015.1_9472_3_19	-	2511STDY5462404
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37605	65.6	-	MLZW01	13	4247	4081	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919661	GCA_001844725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/725/GCA_001844725.1_ASM184472v1	-	C0006290-2
Escherichia coli P0305260.8	1116082	PRJNA77399	77399	Proteobacteria	Gammaproteobacteria	4.82062	50.8	-	AQBR01	126	5145	4660	4/8/13	5/18/17	Contig	IGS	SAMN00829532	GCA_000358125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/125/GCA_000358125.1_ASM35812v1	-	P0305260.8
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	1.97981	39.7	-	MQSA01	67	2177	1931	12/20/16	3/6/17	Contig	JCVI	SAMN05774303	GCA_001909365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/365/GCA_001909365.1_ASM190936v1	-	MMC_A01
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40622	66.4	-	LEIR01	139	6120	5936	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566423	GCA_001036035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/035/GCA_001036035.1_ASM103603v1	-	Pae_CF67.10s
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	4.00908	39	-	NKKH01	190	3922	3762	8/29/17	8/30/17	Scaffold	Hangzhou First People's Hospital	SAMN07251707	GCA_002277655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/655/GCA_002277655.1_ASM227765v1	-	AB74
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.42473	57.2	-	FLGW01	43	5456	5243	5/19/16	2/21/17	Scaffold	SC	SAMEA2273851	GCA_900085735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/735/GCA_900085735.1_12045_7_83	-	k2746
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.39276	57.4	-	FLGX01	48	5389	5139	5/19/16	2/21/17	Scaffold	SC	SAMEA2273852	GCA_900085745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/745/GCA_900085745.1_12045_7_84	-	k2769
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	4.03023	39	-	NKKI01	134	3941	3779	8/29/17	8/30/17	Scaffold	Hangzhou First People's Hospital	SAMN07251706	GCA_002277675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/675/GCA_002277675.1_ASM227767v1	-	AB73
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.29789	66.4	-	LEIS01	974	6123	5546	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566424	GCA_001036065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/065/GCA_001036065.1_ASM103606v1	-	Pae_CF67.10t
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	1.96746	39.7	-	MQSB01	69	2192	1956	12/20/16	3/6/17	Contig	JCVI	SAMN05774304	GCA_001909405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/405/GCA_001909405.1_ASM190940v1	-	MMC_A02
Escherichia coli MP020980.1	1125638	PRJNA78863	78863	Proteobacteria	Gammaproteobacteria	5.39077	50.6	-	APZN01	161	5784	5283	4/8/13	2/25/17	Contig	IGS	SAMN00858014	GCA_000358145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/145/GCA_000358145.2_ASM35814v2	-	MP020980.1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40535	65.6	-	MMBS01	8	4287	4120	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919613	GCA_001844735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/735/GCA_001844735.1_ASM184473v1	-	I0003510-0
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.9523	52.2	-	CZOR01	72	5052	4751	10/21/15	3/1/17	Contig	SC	SAMEA2336237	GCA_001411035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/035/GCA_001411035.1_12216_4_48	-	2511STDY5712390
Staphylococcus aureus M1112	1402629	PRJNA219979	219979	Terrabacteria group	Firmicutes	2.88094	32.8	-	JELN01	49	3033	2858	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360786	GCA_000575965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/965/GCA_000575965.1_Stap_aure_M1112_V1	-	M1112
Staphylococcus aureus M1110	1402627	PRJNA219977	219977	Terrabacteria group	Firmicutes	2.84118	32.8	-	JELO01	46	3003	2832	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360784	GCA_000575985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/575/985/GCA_000575985.1_Stap_aure_M1110_V1	-	M1110
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.04498	52.1	-	CZNI01	77	5179	4873	10/21/15	2/28/17	Contig	SC	SAMEA1904382	GCA_001411055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/055/GCA_001411055.1_9472_3_8	-	2511STDY5462393
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35238	65.6	-	MMBR01	2	4242	4088	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919614	GCA_001844765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/765/GCA_001844765.1_ASM184476v1	-	I0004139-7
Escherichia coli P0302293.9	1116078	PRJNA77391	77391	Proteobacteria	Gammaproteobacteria	5.14086	50.7	-	AQAF01	126	5482	5074	4/8/13	2/25/17	Contig	IGS	SAMN00829417	GCA_000358165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/165/GCA_000358165.2_ASM35816v2	-	P0302293.9
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	2.01576	39.6	-	MQSD01	94	2234	1987	12/20/16	3/15/17	Contig	JCVI	SAMN05774321	GCA_001909415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/415/GCA_001909415.1_ASM190941v1	-	MMC_C03
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39174	66.4	-	LEIU01	112	6118	5833	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566426	GCA_001036105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/105/GCA_001036105.1_ASM103610v1	-	Pae_CF67.11b
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	4.05558	38.9	-	NKKJ01	155	3977	3823	8/29/17	8/30/17	Scaffold	Hangzhou First People's Hospital	SAMN07251705	GCA_002277705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/705/GCA_002277705.1_ASM227770v1	-	AB72
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.54328	57.2	-	FLGY01	40	5583	5310	5/19/16	2/21/17	Scaffold	SC	SAMEA2273853	GCA_900085755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/755/GCA_900085755.1_12045_7_85	-	k1493
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.57902	57.2	-	FLGZ01	48	5628	5342	5/19/16	2/21/17	Scaffold	SC	SAMEA2273854	GCA_900085765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/765/GCA_900085765.1_12045_7_86	-	k1496
Acinetobacter baumannii	470	PRJNA390870	390870	Proteobacteria	Gammaproteobacteria	3.99467	39	-	NKKM01	132	3916	3766	8/29/17	8/30/17	Scaffold	Hangzhou First People's Hospital	SAMN07251702	GCA_002277715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/715/GCA_002277715.1_ASM227771v1	-	AB52
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.3835	66.4	-	LEIV01	172	6144	5704	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566427	GCA_001036115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/115/GCA_001036115.1_ASM103611v1	-	Pae_CF67.11c
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	1.95345	39.8	-	MQSF01	81	2161	1932	12/20/16	3/6/17	Contig	JCVI	SAMN05774323	GCA_001909515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/515/GCA_001909515.1_ASM190951v1	-	MMC_C05
Escherichia coli P0304777.10	1116171	PRJNA77579	77579	Proteobacteria	Gammaproteobacteria	5.10435	50.7	-	AQAG01	140	5418	4995	4/8/13	2/24/17	Contig	IGS	SAMN00829435	GCA_000358185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/185/GCA_000358185.2_ASM35818v2	-	P0304777.10
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39879	65.6	-	MMBN01	3	4277	4084	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919618	GCA_001844775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/775/GCA_001844775.1_ASM184477v1	-	I0002742-0
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.00789	52.1	-	CZLM01	72	5110	4809	10/21/15	2/28/17	Contig	SC	SAMEA2336301	GCA_001411075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/075/GCA_001411075.1_12227_3_50	-	2511STDY5712454
Staphylococcus aureus M1108	1402626	PRJNA219976	219976	Terrabacteria group	Firmicutes	2.88808	32.8	-	JELP01	66	3058	2886	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360783	GCA_000576005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/005/GCA_000576005.1_Stap_aure_M1108_V1	-	M1108
Staphylococcus aureus M1107	1402625	PRJNA219975	219975	Terrabacteria group	Firmicutes	2.82225	32.8	-	JELQ01	53	2961	2793	2/19/14	3/3/17	Scaffold	Broad Institute	SAMN02360782	GCA_000576025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/025/GCA_000576025.1_Stap_aure_M1107_V1	-	M1107
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.9059	52.1	-	CZPL01	47	5000	4708	10/21/15	2/28/17	Contig	SC	SAMEA2336293	GCA_001411095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/095/GCA_001411095.1_12227_3_42	-	2511STDY5712446
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40026	65.6	-	MMBP01	11	4276	4112	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919616	GCA_001844805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/805/GCA_001844805.1_ASM184480v1	-	I0004158-7
Escherichia coli P0304777.11	1116172	PRJNA77581	77581	Proteobacteria	Gammaproteobacteria	5.09229	50.7	-	AQAH01	133	5433	4975	4/8/13	2/25/17	Contig	IGS	SAMN00829436	GCA_000358205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/205/GCA_000358205.2_ASM35820v2	-	P0304777.11
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	2.0198	39.6	-	MQSH01	85	2246	2005	12/20/16	3/6/17	Contig	JCVI	SAMN05774325	GCA_001909525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/525/GCA_001909525.1_ASM190952v1	-	MMC_C07
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40288	66.4	-	LEIW01	146	6128	5922	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566428	GCA_001036145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/145/GCA_001036145.1_ASM103614v1	-	Pae_CF67.11d
Acinetobacter baumannii	470	PRJNA398639	398639	Proteobacteria	Gammaproteobacteria	4.05517	40	-	NRSX01	851	3900	3563	9/8/17	9/11/17	Scaffold	Universite de Lome	SAMN07551566	GCA_002288625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/625/GCA_002288625.1_ASM228862v1	-	460
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.58281	57.2	-	FLHB01	60	5632	5353	5/19/16	2/21/17	Scaffold	SC	SAMEA2273855	GCA_900085775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/775/GCA_900085775.1_12045_7_87	-	k1497
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.46932	57.2	-	FLHA01	79	5508	5242	5/19/16	2/21/17	Scaffold	SC	SAMEA2273856	GCA_900085785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/785/GCA_900085785.1_12045_7_88	-	k1025
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.97761	39	-	FPEU01	74	3837	3687	11/9/16	3/20/17	Scaffold	SC	SAMEA1466049	GCA_900117475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/475/GCA_900117475.1_7468_1_5	-	Ab5
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40522	66.4	-	LEIX01	158	6110	5923	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566429	GCA_001036155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/155/GCA_001036155.1_ASM103615v1	-	Pae_CF67.11e
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	2.0133	39.7	-	MQRM01	80	2241	1999	12/20/16	3/14/17	Contig	JCVI	SAMN05774305	GCA_001909565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/565/GCA_001909565.1_ASM190956v1	-	MMC_A03
Escherichia coli P0304777.12	1116173	PRJNA77583	77583	Proteobacteria	Gammaproteobacteria	5.09031	50.7	-	AQAI01	131	5419	4964	4/8/13	2/25/17	Contig	IGS	SAMN00829437	GCA_000358225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/225/GCA_000358225.2_ASM35822v2	-	P0304777.12
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3881	65.6	-	MMBQ01	8	4274	4111	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919615	GCA_001844825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/825/GCA_001844825.1_ASM184482v1	-	C0011119-6
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.13583	52.1	-	CZMR01	80	5273	4943	10/21/15	3/1/17	Contig	SC	SAMEA1904391	GCA_001411115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/115/GCA_001411115.1_9472_3_10	-	2511STDY5462395
Staphylococcus aureus F41902	1410694	PRJNA224324	224324	Terrabacteria group	Firmicutes	2.96058	32.8	-	JEOH01	8	3115	2943	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02383614	GCA_000576755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/755/GCA_000576755.1_Stap_aure_F41902_V1	-	F41902
Staphylococcus aureus W21479	1410760	PRJNA224391	224391	Terrabacteria group	Firmicutes	2.92032	32.8	-	JEOI01	8	3072	2904	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02383680	GCA_000576775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/775/GCA_000576775.1_Stap_aure_W21479_V1	-	W21479
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.04721	52.1	-	CZOQ01	73	5178	4871	10/21/15	3/1/17	Contig	SC	SAMEA2336278	GCA_001411135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/135/GCA_001411135.1_12227_3_27	-	2511STDY5712431
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40571	65.6	-	MMBO01	7	4290	4137	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919617	GCA_001844845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/845/GCA_001844845.1_ASM184484v1	-	C0006478-3
Escherichia coli P0304777.13	1116174	PRJNA77585	77585	Proteobacteria	Gammaproteobacteria	5.09447	50.7	-	AQAJ01	132	5429	4989	4/8/13	2/24/17	Contig	IGS	SAMN00829440	GCA_000358245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/245/GCA_000358245.2_ASM35824v2	-	P0304777.13
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	1.96394	39.7	-	MQSQ01	65	2182	1951	12/20/16	3/14/17	Contig	JCVI	SAMN05774335	GCA_001909705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/705/GCA_001909705.1_ASM190970v1	-	MMC_E01
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40404	66.4	-	LEIY01	85	6130	5938	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566430	GCA_001036185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/185/GCA_001036185.1_ASM103618v1	-	Pae_CF67.11f
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	4.02755	39	-	FPEQ01	90	3901	3747	11/9/16	3/20/17	Scaffold	SC	SAMEA1465996	GCA_900117485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/485/GCA_900117485.1_7468_1_38	-	Ab38
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.67614	57.1	-	FLHC01	127	5829	5511	5/19/16	2/21/17	Scaffold	SC	SAMEA2273857	GCA_900085795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/795/GCA_900085795.1_12045_7_89	-	k1664
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.53769	57.2	-	FLHD01	57	5546	5261	5/19/16	2/21/17	Scaffold	SC	SAMEA2273858	GCA_900085805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/805/GCA_900085805.1_12045_7_90	-	k1448
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.91573	39	-	FPEO01	70	3793	3637	11/9/16	3/20/17	Scaffold	SC	SAMEA1466048	GCA_900117495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/495/GCA_900117495.1_7468_1_43	-	Ab43
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39911	66.4	-	LEIZ01	199	6103	5901	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566431	GCA_001036195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/195/GCA_001036195.1_ASM103619v1	-	Pae_CF67.11g
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	1.95537	39.8	-	MQRX01	98	2153	1925	12/20/16	3/14/17	Contig	JCVI	SAMN05774317	GCA_001909715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/715/GCA_001909715.1_ASM190971v1	-	MMC_B07
Escherichia coli P0304777.14	1116175	PRJNA77587	77587	Proteobacteria	Gammaproteobacteria	5.09012	50.6	-	AQAK01	119	5366	4963	4/8/13	2/25/17	Contig	IGS	SAMN00829491	GCA_000358265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/265/GCA_000358265.2_ASM35826v2	-	P0304777.14
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.4064	65.6	-	MMBL01	10	4285	4114	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919620	GCA_001844855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/855/GCA_001844855.1_ASM184485v1	-	I0001278-6
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.05288	52.1	-	CZOF01	88	5199	4852	10/21/15	3/1/17	Contig	SC	SAMEA2336245	GCA_001411155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/155/GCA_001411155.1_12216_4_56	-	2511STDY5712398
Staphylococcus aureus F52754	1410780	PRJNA224411	224411	Terrabacteria group	Firmicutes	2.88094	32.8	-	JEOJ01	9	3052	2893	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02383700	GCA_000576795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/795/GCA_000576795.1_Stap_aure_F52754_V1	-	F52754
Staphylococcus aureus M12709	1410783	PRJNA224414	224414	Terrabacteria group	Firmicutes	2.86202	32.9	-	JEOK01	8	2999	2828	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02383703	GCA_000576815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/815/GCA_000576815.1_Stap_aure_M12709_V1	-	M12709
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.16188	52.1	-	CZMF01	86	5310	4984	10/21/15	3/1/17	Contig	SC	SAMEA1904386	GCA_001411175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/175/GCA_001411175.1_9472_3_13	-	2511STDY5462398
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.4044	65.6	-	MMBM01	3	4276	4121	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919619	GCA_001844875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/875/GCA_001844875.1_ASM184487v1	-	I0003938-3
Escherichia coli P0304777.15	1116176	PRJNA77589	77589	Proteobacteria	Gammaproteobacteria	5.1152	50.7	-	AQAL01	137	5434	4994	4/8/13	2/25/17	Contig	IGS	SAMN00829492	GCA_000358285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/285/GCA_000358285.2_ASM35828v2	-	P0304777.15
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	1.96989	39.7	-	MQSO01	70	2196	1950	12/20/16	3/14/17	Contig	JCVI	SAMN05774333	GCA_001909725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/725/GCA_001909725.1_ASM190972v1	-	MMC_D07
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.4015	66.4	-	LEJA01	172	6107	5921	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566432	GCA_001036225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/225/GCA_001036225.1_ASM103622v1	-	Pae_CF67.11h
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.8181	39	-	FPET01	71	3662	3519	11/9/16	3/20/17	Scaffold	SC	SAMEA1466024	GCA_900117505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/505/GCA_900117505.1_7468_1_21	-	Ab21
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.26504	57.5	-	FLHE01	42	5259	5020	5/19/16	2/21/17	Scaffold	SC	SAMEA2273861	GCA_900085815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/815/GCA_900085815.1_12045_7_92	-	k1773
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.77711	57.2	-	FLHG01	93	5868	5543	5/19/16	2/25/17	Scaffold	SC	SAMEA2273862	GCA_900085825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/825/GCA_900085825.1_12045_7_93	-	k1148
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.97851	39	-	FPEM01	74	3838	3686	11/9/16	3/20/17	Scaffold	SC	SAMEA1466005	GCA_900117515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/515/GCA_900117515.1_7468_1_1	-	Ab1
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.38846	66.4	-	LEJB01	231	6129	5886	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566433	GCA_001036235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/235/GCA_001036235.1_ASM103623v1	-	Pae_CF67.11i
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	1.97523	39.7	-	MQSE01	72	2186	1940	12/20/16	3/14/17	Contig	JCVI	SAMN05774322	GCA_001909765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/765/GCA_001909765.1_ASM190976v1	-	MMC_C04
Escherichia coli P0304777.3	1116165	PRJNA77567	77567	Proteobacteria	Gammaproteobacteria	5.09962	50.7	-	AQAN01	138	5418	4954	4/8/13	5/18/17	Contig	IGS	SAMN00829494	GCA_000358315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/315/GCA_000358315.1_ASM35831v1	-	P0304777.3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40204	65.6	-	MMBK01	8	4280	4096	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919621	GCA_001844905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/905/GCA_001844905.1_ASM184490v1	-	I0004294-0
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.99833	52.1	-	CZNJ01	75	5100	4790	10/21/15	2/28/17	Contig	SC	SAMEA1904383	GCA_001411195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/195/GCA_001411195.1_9472_3_9	-	2511STDY5462394
Staphylococcus aureus F80354	1410843	PRJNA224474	224474	Terrabacteria group	Firmicutes	2.90379	32.7	-	JEOL01	24	3073	2920	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02383763	GCA_000576835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/835/GCA_000576835.1_Stap_aure_F80354_V1	-	F80354
Staphylococcus aureus M36089	1410844	PRJNA224475	224475	Terrabacteria group	Firmicutes	2.88748	32.7	-	JEOM01	27	3036	2879	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02383764	GCA_000576855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/855/GCA_000576855.1_Stap_aure_M36089_V1	-	M36089
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.95492	52.1	-	CZMY01	75	5054	4731	10/21/15	3/1/17	Contig	SC	SAMEA2336256	GCA_001411215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/215/GCA_001411215.1_12227_3_5	-	2511STDY5712409
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39808	65.6	-	MMBJ01	8	4275	4121	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919622	GCA_001844945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/945/GCA_001844945.1_ASM184494v1	-	I0004188-4
Escherichia coli P0304777.5	1116167	PRJNA77571	77571	Proteobacteria	Gammaproteobacteria	5.11039	50.8	-	AQAP01	511	5529	4987	4/8/13	2/25/17	Contig	IGS	SAMN00829496	GCA_000358335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/335/GCA_000358335.2_ASM35833v2	-	P0304777.5
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	2.02391	39.7	-	MQRS01	220	2240	2002	12/20/16	3/14/17	Contig	JCVI	SAMN05774311	GCA_001909835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/835/GCA_001909835.1_ASM190983v1	-	MMC_B01
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40376	66.4	-	LEJC01	85	6119	5941	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566434	GCA_001036255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/255/GCA_001036255.1_ASM103625v1	-	Pae_CF67.11j
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	4.02538	39	-	FPEV01	86	3902	3749	11/9/16	3/20/17	Scaffold	SC	SAMEA1466078	GCA_900117525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/525/GCA_900117525.1_7468_1_36	-	Ab36
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.54979	57.2	-	FLHF01	47	5569	5301	5/19/16	2/21/17	Scaffold	SC	SAMEA2273859	GCA_900085835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/835/GCA_900085835.1_12045_7_91	-	k1741
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.47779	57.3	-	FLHH01	42	5563	5291	5/19/16	2/21/17	Scaffold	SC	SAMEA2273867	GCA_900085845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/845/GCA_900085845.1_12082_2_2	-	k1460
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.86979	39	-	FPER01	75	3713	3565	11/9/16	3/20/17	Scaffold	SC	SAMEA1466074	GCA_900117535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/535/GCA_900117535.1_7468_1_31	-	Ab31
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40512	66.4	-	LEJD01	131	6118	5931	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566435	GCA_001036265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/265/GCA_001036265.1_ASM103626v1	-	Pae_CF67.11k
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	1.98859	39.7	-	MQSK01	218	2176	1956	12/20/16	3/14/17	Contig	JCVI	SAMN05774328	GCA_001909855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/855/GCA_001909855.1_ASM190985v1	-	MMC_D02
Escherichia coli P0304777.4	1116166	PRJNA77569	77569	Proteobacteria	Gammaproteobacteria	5.09865	50.7	-	AQAO01	141	5420	4988	4/8/13	2/25/17	Contig	IGS	SAMN00829495	GCA_000358355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/355/GCA_000358355.2_ASM35835v2	-	P0304777.4
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39448	65.6	-	MMBH01	10	4273	4107	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919624	GCA_001844985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/985/GCA_001844985.1_ASM184498v1	-	I0003710-6
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.95532	52.1	-	CZLZ01	69	5093	4787	10/21/15	3/1/17	Contig	SC	SAMEA2336290	GCA_001411235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/235/GCA_001411235.1_12227_3_39	-	2511STDY5712443
Staphylococcus aureus W82310	1410873	PRJNA224504	224504	Terrabacteria group	Firmicutes	2.87573	32.9	-	JEON01	17	2989	2815	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02383793	GCA_000576875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/875/GCA_000576875.1_Stap_aure_W82310_V1	-	W82310
Staphylococcus aureus T45940	1410881	PRJNA224512	224512	Terrabacteria group	Firmicutes	2.92806	32.8	-	JEOO01	9	3102	2945	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02383801	GCA_000576905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/905/GCA_000576905.1_Stap_aure_T45940_V1	-	T45940
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.9159	52.2	-	CZNT01	55	4998	4689	10/21/15	2/28/17	Contig	SC	SAMEA2336264	GCA_001411255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/255/GCA_001411255.1_12227_3_13	-	2511STDY5712417
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40319	65.6	-	MMBE01	10	4284	4114	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919627	GCA_001845005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/005/GCA_001845005.1_ASM184500v1	-	I0004435-9
Escherichia coli P0304777.7	1116168	PRJNA77573	77573	Proteobacteria	Gammaproteobacteria	5.09679	50.6	-	AQAQ01	138	5424	4984	4/8/13	5/18/17	Contig	IGS	SAMN00829497	GCA_000358375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/375/GCA_000358375.1_ASM35837v1	-	P0304777.7
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	1.98089	39.7	-	MQRQ01	70	2156	1933	12/20/16	3/14/17	Contig	JCVI	SAMN05774309	GCA_001909885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/885/GCA_001909885.1_ASM190988v1	-	MMC_A07
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39091	66.4	-	LEJE01	202	6142	5634	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566444	GCA_001036305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/305/GCA_001036305.1_ASM103630v1	-	Pae_CF67.12a
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.83126	38.9	-	FPEX01	81	3670	3526	11/9/16	3/20/17	Scaffold	SC	SAMEA1466065	GCA_900117545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/545/GCA_900117545.1_7468_1_30	-	Ab30
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.35299	57.3	-	FLHK01	46	5391	5176	5/19/16	2/21/17	Scaffold	SC	SAMEA2273866	GCA_900085855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/855/GCA_900085855.1_12082_2_1	-	k1583
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.75183	57	-	FLHJ01	112	5939	5613	5/19/16	2/21/17	Scaffold	SC	SAMEA2273863	GCA_900085865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/865/GCA_900085865.1_12045_7_94	-	k554
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	4.01291	39.1	-	FPEK01	65	3891	3747	11/9/16	3/20/17	Scaffold	SC	SAMEA1466015	GCA_900117555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/555/GCA_900117555.1_7468_1_20	-	Ab20
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.4054	66.4	-	LEJG01	155	6117	5926	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566436	GCA_001036335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/335/GCA_001036335.1_ASM103633v1	-	Pae_CF67.11l
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	2.00522	39.8	-	MQRP01	84	2217	1979	12/20/16	3/14/17	Contig	JCVI	SAMN05774308	GCA_001909905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/905/GCA_001909905.1_ASM190990v1	-	MMC_A06
Escherichia coli P0304777.8	1116169	PRJNA77575	77575	Proteobacteria	Gammaproteobacteria	5.06918	50.7	-	AQAR01	309	5446	4928	4/8/13	2/25/17	Contig	IGS	SAMN00829500	GCA_000358395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/395/GCA_000358395.2_ASM35839v2	-	P0304777.8
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39481	65.6	-	MMBD01	4	4270	4103	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919628	GCA_001845045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/045/GCA_001845045.1_ASM184504v1	-	I0004236-1
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.06422	52.1	-	CZME01	87	5217	4900	10/21/15	3/1/17	Contig	SC	SAMEA1904395	GCA_001411275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/275/GCA_001411275.1_9472_3_23	-	2511STDY5462408
Staphylococcus aureus H79484	1410884	PRJNA224515	224515	Terrabacteria group	Firmicutes	2.8761	32.9	-	JEOP01	15	3021	2858	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02383804	GCA_000576925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/925/GCA_000576925.1_Stap_aure_H79484_V1	-	H79484
Staphylococcus aureus W48969	1410888	PRJNA224519	224519	Terrabacteria group	Firmicutes	2.96608	32.9	-	JEOQ01	29	3134	2951	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02383808	GCA_000576945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/945/GCA_000576945.1_Stap_aure_W48969_V1	-	W48969
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.16932	52.1	-	CZLL01	86	5303	4989	10/21/15	2/28/17	Contig	SC	SAMEA1904398	GCA_001411295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/295/GCA_001411295.1_9472_3_21	-	2511STDY5462406
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39105	65.6	-	MMBB01	7	4262	4094	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919630	GCA_001845065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/065/GCA_001845065.1_ASM184506v1	-	I0003922-7
Escherichia coli P0304777.9	1116170	PRJNA77577	77577	Proteobacteria	Gammaproteobacteria	5.08367	50.7	-	AQAS01	199	5452	4949	4/8/13	2/25/17	Contig	IGS	SAMN00829502	GCA_000358415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/415/GCA_000358415.2_ASM35841v2	-	P0304777.9
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	1.96369	39.7	-	MQRT01	66	2184	1954	12/20/16	3/14/17	Contig	JCVI	SAMN05774312	GCA_001909925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/925/GCA_001909925.1_ASM190992v1	-	MMC_B02
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40369	66.4	-	LEJH01	96	6126	5930	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566437	GCA_001036355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/355/GCA_001036355.1_ASM103635v1	-	Pae_CF67.11m
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	4.0389	38.9	-	FPEP01	79	3901	3724	11/9/16	3/20/17	Scaffold	SC	SAMEA1466025	GCA_900117565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/565/GCA_900117565.1_7468_1_41	-	Ab41
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.54949	57.2	-	FLHI01	54	5592	5335	5/19/16	2/21/17	Scaffold	SC	SAMEA2273865	GCA_900085875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/875/GCA_900085875.1_12045_7_96	-	k1954
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.29563	57.3	-	FLHL01	44	5270	5040	5/19/16	2/21/17	Scaffold	SC	SAMEA2273868	GCA_900085885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/885/GCA_900085885.1_12082_2_3	-	k1310
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.91699	39	-	FPES01	85	3778	3635	11/9/16	3/20/17	Scaffold	SC	SAMEA1465990	GCA_900117575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/575/GCA_900117575.1_7468_1_37	-	Ab37
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40526	66.4	-	LEJI01	121	6120	5931	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566438	GCA_001036385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/385/GCA_001036385.1_ASM103638v1	-	Pae_CF67.11n
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	2.02028	39.6	-	MQSL01	93	2256	2003	12/20/16	3/14/17	Contig	JCVI	SAMN05774329	GCA_001909955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/955/GCA_001909955.1_ASM190995v1	-	MMC_D03
Escherichia coli P0304816.10	1116186	PRJNA77609	77609	Proteobacteria	Gammaproteobacteria	5.23576	50.5	-	AQAT01	178	5581	5069	4/8/13	2/25/17	Contig	IGS	SAMN00829504	GCA_000358435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/435/GCA_000358435.2_ASM35843v2	-	P0304816.10
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41001	65.6	-	MMBA01	6	4289	4132	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919631	GCA_001845075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/075/GCA_001845075.1_ASM184507v1	-	I0003758-5
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.85944	52.1	-	CZOX01	65	4951	4667	10/21/15	3/1/17	Contig	SC	SAMEA2336230	GCA_001411315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/315/GCA_001411315.1_12216_4_41	-	2511STDY5712383
Staphylococcus aureus W48973	1410889	PRJNA224520	224520	Terrabacteria group	Firmicutes	2.89292	32.8	-	JEOR01	33	3055	2868	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02383809	GCA_000576965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/965/GCA_000576965.1_Stap_aure_W48973_V1	-	W48973
Staphylococcus aureus M44986	1410895	PRJNA224526	224526	Terrabacteria group	Firmicutes	2.86948	32.7	-	JEOS01	5	3022	2867	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02383815	GCA_000576985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/985/GCA_000576985.1_Stap_aure_M44986_V1	-	M44986
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.92434	52.1	-	CZNY01	50	5005	4715	10/21/15	3/1/17	Contig	SC	SAMEA2336263	GCA_001411335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/335/GCA_001411335.1_12227_3_12	-	2511STDY5712416
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41053	65.6	-	MMAY01	21	4304	4130	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919633	GCA_001845165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/165/GCA_001845165.1_ASM184516v1	-	I0004204-9
Escherichia coli P0304816.11	1116187	PRJNA77611	77611	Proteobacteria	Gammaproteobacteria	5.25955	50.5	-	AQAU01	176	5577	5139	4/8/13	2/25/17	Contig	IGS	SAMN00829505	GCA_000358455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/455/GCA_000358455.2_ASM35845v2	-	P0304816.11
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	2.01831	39.6	-	MQSM01	89	2255	2014	12/20/16	3/6/17	Contig	JCVI	SAMN05774331	GCA_001909965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/965/GCA_001909965.1_ASM190996v1	-	MMC_D05
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.38588	66.4	-	LEJJ01	210	6076	5872	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566439	GCA_001036405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/405/GCA_001036405.1_ASM103640v1	-	Pae_CF67.11o
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.97897	39	-	FPEL01	74	3840	3684	11/9/16	3/20/17	Scaffold	SC	SAMEA1465989	GCA_900117585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/585/GCA_900117585.1_7468_1_2	-	Ab2
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.56254	57.3	-	FLHN01	75	5653	5380	5/19/16	2/21/17	Scaffold	SC	SAMEA2273871	GCA_900085895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/895/GCA_900085895.1_12082_2_6	-	k1054
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.55016	57.1	-	FLHM01	73	5641	5368	5/19/16	2/25/17	Scaffold	SC	SAMEA2273870	GCA_900085905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/905/GCA_900085905.1_12082_2_5	-	k1271
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.82595	39	-	FPEN01	70	3665	3516	11/9/16	3/20/17	Scaffold	SC	SAMEA1466055	GCA_900117595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/595/GCA_900117595.1_7468_1_24	-	Ab24
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40346	66.4	-	LEJK01	75	6114	5944	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566440	GCA_001036415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/415/GCA_001036415.1_ASM103641v1	-	Pae_CF67.11p
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	2.01994	39.6	-	MQSI01	89	2248	2001	12/20/16	3/14/17	Contig	JCVI	SAMN05774326	GCA_001909995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/995/GCA_001909995.1_ASM190999v1	-	MMC_C08
Escherichia coli P0304816.13	1116189	PRJNA77615	77615	Proteobacteria	Gammaproteobacteria	5.19829	50.5	-	AQAW01	183	5604	5142	4/8/13	5/18/17	Contig	IGS	SAMN00829506	GCA_000358475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/475/GCA_000358475.1_ASM35847v1	-	P0304816.13
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.42181	65.6	-	MMAW01	11	4309	4143	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919635	GCA_001845175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/175/GCA_001845175.1_ASM184517v1	-	I0004458-1
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.98853	52.1	-	CZOO01	71	5108	4790	10/21/15	3/1/17	Contig	SC	SAMEA2336269	GCA_001411355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/355/GCA_001411355.1_12227_3_18	-	2511STDY5712422
Staphylococcus aureus M44987	1410896	PRJNA224527	224527	Terrabacteria group	Firmicutes	2.87079	32.8	-	JEOT01	7	3026	2868	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02383816	GCA_000577005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/005/GCA_000577005.1_Stap_aure_M44987_V1	-	M44987
Staphylococcus aureus F77709	1410899	PRJNA224530	224530	Terrabacteria group	Firmicutes	2.94615	32.8	-	JEOU01	4	3124	2963	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02383819	GCA_000577025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/025/GCA_000577025.1_Stap_aure_F77709_V1	-	F77709
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.97857	52.1	-	CZOL01	83	5089	4770	10/21/15	3/1/17	Contig	SC	SAMEA2336272	GCA_001411375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/375/GCA_001411375.1_12227_3_21	-	2511STDY5712425
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39945	65.6	-	MMAV01	7	4269	4102	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919636	GCA_001845185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/185/GCA_001845185.1_ASM184518v1	-	C0011359-8
Escherichia coli P0304816.12	1116188	PRJNA77613	77613	Proteobacteria	Gammaproteobacteria	5.2088	50.5	-	AQAV01	169	5566	5124	4/8/13	2/25/17	Contig	IGS	SAMN00829507	GCA_000358495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/495/GCA_000358495.2_ASM35849v2	-	P0304816.12
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	2.05851	39.5	-	MQRY01	85	2274	2018	12/20/16	3/14/17	Contig	JCVI	SAMN05774318	GCA_001910025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/025/GCA_001910025.1_ASM191002v1	-	MMC_B08
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40267	66.4	-	LEJL01	173	6117	5910	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566441	GCA_001036425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/425/GCA_001036425.1_ASM103642v1	-	Pae_CF67.11q
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.82522	39	-	FPFB01	69	3660	3516	11/9/16	3/20/17	Scaffold	SC	SAMEA1466034	GCA_900117605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/605/GCA_900117605.1_7468_1_25	-	Ab25
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.66072	56.8	-	FLHO01	90	5723	5436	5/19/16	2/21/17	Scaffold	SC	SAMEA2273873	GCA_900085915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/915/GCA_900085915.1_12082_2_9	-	k1468
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.58173	56.9	-	FLHP01	80	5633	5370	5/19/16	2/25/17	Scaffold	SC	SAMEA2273874	GCA_900085925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/925/GCA_900085925.1_12082_2_10	-	k1631
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.95013	39.1	-	FPFD01	78	3822	3660	11/9/16	3/20/17	Scaffold	SC	SAMEA1466050	GCA_900117615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/615/GCA_900117615.1_7468_1_14	-	Ab14
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.4065	66.4	-	LEJM01	126	6117	5933	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566442	GCA_001036465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/465/GCA_001036465.1_ASM103646v1	-	Pae_CF67.11s
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	1.96859	39.7	-	MQSP01	66	2204	1967	12/20/16	3/15/17	Contig	JCVI	SAMN05774334	GCA_001910075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/075/GCA_001910075.1_ASM191007v1	-	MMC_D08
Escherichia coli P0304816.15	1116191	PRJNA77619	77619	Proteobacteria	Gammaproteobacteria	5.18199	50.5	-	AQAY01	158	5506	5067	4/8/13	2/25/17	Contig	IGS	SAMN00829509	GCA_000358515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/515/GCA_000358515.2_ASM35851v2	-	P0304816.15
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38312	65.6	-	MMAU01	2	4258	4101	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919637	GCA_001845225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/225/GCA_001845225.1_ASM184522v1	-	I0004205-6
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.94683	52.1	-	CZOE01	58	5047	4737	10/21/15	3/1/17	Contig	SC	SAMEA2336282	GCA_001411395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/395/GCA_001411395.1_12227_3_31	-	2511STDY5712435
Staphylococcus aureus F74035	1410900	PRJNA224531	224531	Terrabacteria group	Firmicutes	2.90205	32.8	-	JEOV01	6	3036	2872	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02383820	GCA_000577045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/045/GCA_000577045.1_Stap_aure_F74035_V1	-	F74035
Staphylococcus aureus F74039	1410901	PRJNA224532	224532	Terrabacteria group	Firmicutes	2.89143	32.7	-	JEOW01	4	3044	2883	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02383821	GCA_000577065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/065/GCA_000577065.1_Stap_aure_F74039_V1	-	F74039
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	4.92007	52.1	-	CZMW01	60	5016	4721	10/21/15	2/28/17	Contig	SC	SAMEA2336294	GCA_001411435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/435/GCA_001411435.1_12227_3_43	-	2511STDY5712447
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37528	65.6	-	MMAT01	14	4256	4105	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919638	GCA_001845245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/245/GCA_001845245.1_ASM184524v1	-	I0003211-5
Escherichia coli P0304816.2	1116178	PRJNA77593	77593	Proteobacteria	Gammaproteobacteria	5.18209	50.4	-	AQAZ01	173	5537	5067	4/8/13	2/25/17	Contig	IGS	SAMN00829510	GCA_000358535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/535/GCA_000358535.2_ASM35853v2	-	P0304816.2
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	2.02208	39.6	-	MQRZ01	114	2249	2015	12/20/16	3/14/17	Contig	JCVI	SAMN05774319	GCA_001910135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/135/GCA_001910135.1_ASM191013v1	-	MMC_C01
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40514	66.4	-	LEJN01	85	6114	5937	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566443	GCA_001036485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/485/GCA_001036485.1_ASM103648v1	-	Pae_CF67.11t
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.91426	39	-	FPFR01	72	3784	3647	11/9/16	3/20/17	Scaffold	SC	SAMEA1466039	GCA_900117625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/625/GCA_900117625.1_7468_1_42	-	Ab42
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.47464	57.2	-	FLHR01	42	5426	5185	5/19/16	2/21/17	Scaffold	SC	SAMEA2273877	GCA_900085935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/935/GCA_900085935.1_12082_2_13	-	k2326
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.63919	57.2	-	FLHT01	77	5661	5409	5/19/16	2/21/17	Scaffold	SC	SAMEA2273878	GCA_900085945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/945/GCA_900085945.1_12082_2_14	-	k2671
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.97764	39.1	-	FPEY01	84	3844	3685	11/9/16	3/20/17	Scaffold	SC	SAMEA1465997	GCA_900117635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/635/GCA_900117635.1_7468_1_47	-	Ab47
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40169	66.4	-	LEJP01	150	6115	5927	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566447	GCA_001036495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/495/GCA_001036495.1_ASM103649v1	-	Pae_CF67.12d
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	2.01128	39.7	-	MQRV01	79	2226	2005	12/20/16	3/14/17	Contig	JCVI	SAMN05774315	GCA_001910155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/155/GCA_001910155.1_ASM191015v1	-	MMC_B05
Escherichia coli p0305293.10	1116098	PRJNA77431	77431	Proteobacteria	Gammaproteobacteria	5.09555	50.4	-	AQBT01	189	5552	5069	4/8/13	5/18/17	Contig	IGS	SAMN00829536	GCA_000358555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/555/GCA_000358555.1_ASM35855v1	-	p0305293.10
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.42706	65.6	-	MMAS01	16	4316	4140	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919639	GCA_001845265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/265/GCA_001845265.1_ASM184526v1	-	I0004437-5
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJEB1397	268726	Proteobacteria	Gammaproteobacteria	5.01562	52.1	-	CZNC01	85	5122	4825	10/21/15	3/1/17	Contig	SC	SAMEA1904394	GCA_001411455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/455/GCA_001411455.1_9472_3_20	-	2511STDY5462405
Staphylococcus aureus H41336	1410904	PRJNA224535	224535	Terrabacteria group	Firmicutes	2.95819	32.9	-	JEOX01	4	3112	2909	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02383824	GCA_000577085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/085/GCA_000577085.1_Stap_aure_H41336_V1	-	H41336
Staphylococcus aureus H44713	1410909	PRJNA224540	224540	Terrabacteria group	Firmicutes	2.85629	32.9	-	JEOY01	7	2989	2829	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02383829	GCA_000577105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/105/GCA_000577105.1_Stap_aure_H44713_V1	-	H44713
Salmonella enterica	28901	PRJNA294945	294945	Proteobacteria	Gammaproteobacteria	4.97955	52.3	-	LJOG01	50	5077	4786	11/13/15	3/1/17	Contig	LAU	SAMN04046578	GCA_001443185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/443/185/GCA_001443185.1_ASM144318v1	-	SAGM-KPC
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38737	65.6	-	MMAR01	15	4262	4095	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919640	GCA_001845275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/275/GCA_001845275.1_ASM184527v1	-	I0003888-0
Escherichia coli p0305293.11	1116099	PRJNA77433	77433	Proteobacteria	Gammaproteobacteria	5.0183	50.6	-	AQBU01	294	5487	4968	4/8/13	2/24/17	Contig	IGS	SAMN00829537	GCA_000358575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/575/GCA_000358575.2_ASM35857v2	-	p0305293.11
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	2.01349	39.7	-	MQRW01	82	2239	2004	12/20/16	3/14/17	Contig	JCVI	SAMN05774316	GCA_001910185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/185/GCA_001910185.1_ASM191018v1	-	MMC_B06
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40562	66.4	-	LEJO01	144	6116	5927	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566446	GCA_001036505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/505/GCA_001036505.1_ASM103650v1	-	Pae_CF67.12c
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.97742	39	-	FPFA01	75	3842	3692	11/9/16	3/20/17	Scaffold	SC	SAMEA1466072	GCA_900117645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/645/GCA_900117645.1_7468_1_4	-	Ab4
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.57659	57.2	-	FLHS01	93	5644	5315	5/19/16	2/21/17	Scaffold	SC	SAMEA2273875	GCA_900085955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/955/GCA_900085955.1_12082_2_11	-	k1350
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.36595	57.5	-	FLHQ01	31	5386	5156	5/19/16	2/25/17	Scaffold	SC	SAMEA2273879	GCA_900085965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/965/GCA_900085965.1_12082_2_15	-	k2158
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.95066	39.1	-	FPEW01	80	3825	3661	11/9/16	3/20/17	Scaffold	SC	SAMEA1466081	GCA_900117655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/655/GCA_900117655.1_7468_1_12	-	Ab12
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39491	66.4	-	LEJQ01	167	6123	5894	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566448	GCA_001036545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/545/GCA_001036545.1_ASM103654v1	-	Pae_CF67.12e
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	1.99062	40.4	-	MQSG01	146	2172	1966	12/20/16	3/14/17	Contig	JCVI	SAMN05774324	GCA_001910205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/205/GCA_001910205.1_ASM191020v1	-	MMC_C06
Escherichia coli p0305293.12	1116100	PRJNA77435	77435	Proteobacteria	Gammaproteobacteria	5.09036	50.4	-	AQBV01	164	5515	5074	4/8/13	2/25/17	Contig	IGS	SAMN00829538	GCA_000358595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/595/GCA_000358595.2_ASM35859v2	-	p0305293.12
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40689	65.6	-	MMAQ01	29	4294	4115	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919641	GCA_001845305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/305/GCA_001845305.1_ASM184530v1	-	I0004320-3
Salmonella enterica subsp. enterica serovar Fresno str. ST224	1242093	PRJNA177211	177211	Proteobacteria	Gammaproteobacteria	4.80185	52.2	-	LHSS01	15	4971	4711	11/27/15	3/1/17	Contig	Laboratory for Foodborne Zoonoses	SAMN03569078	GCA_001448465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/465/GCA_001448465.1_ASM144846v1	26941156	ST224
Staphylococcus aureus F31094	1410910	PRJNA224541	224541	Terrabacteria group	Firmicutes	2.85203	32.7	-	JEOZ01	5	2991	2823	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02383830	GCA_000577125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/125/GCA_000577125.1_Stap_aure_F31094_V1	-	F31094
Staphylococcus aureus F46780	1412725	PRJNA225143	225143	Terrabacteria group	Firmicutes	2.91433	32.8	-	JEPA01	4	3080	2927	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02385465	GCA_000577145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/145/GCA_000577145.1_Stap_aure_F46780_V1	-	F46780
Salmonella enterica subsp. enterica serovar Berta str. SA20103550	1242696	PRJNA177210	177210	Proteobacteria	Gammaproteobacteria	5.03537	52.1	-	LHSR01	21	5202	4885	11/27/15	3/1/17	Contig	Laboratory for Foodborne Zoonoses	SAMN03470706	GCA_001448475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/475/GCA_001448475.1_ASM144847v1	26941156	SA20103550
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39422	65.6	-	MMAM01	18	4269	4102	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919645	GCA_001845375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/375/GCA_001845375.1_ASM184537v1	-	C0008866-7
Escherichia coli p0305293.15	1116102	PRJNA77439	77439	Proteobacteria	Gammaproteobacteria	5.07835	50.4	-	AQBW01	166	5541	5055	4/8/13	2/24/17	Contig	IGS	SAMN00829540	GCA_000358615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/615/GCA_000358615.2_ASM35861v2	-	p0305293.15
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	1.95141	39.8	-	MQSN01	76	2154	1931	12/20/16	3/14/17	Contig	JCVI	SAMN05774332	GCA_001910225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/225/GCA_001910225.1_ASM191022v1	-	MMC_D06
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40486	66.4	-	LEJR01	115	6108	5930	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566449	GCA_001036565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/565/GCA_001036565.1_ASM103656v1	-	Pae_CF67.12f
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.95043	39.1	-	FPFG01	82	3825	3660	11/9/16	3/20/17	Scaffold	SC	SAMEA1466066	GCA_900117665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/665/GCA_900117665.1_7468_1_15	-	Ab15
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.55559	57.2	-	FLHX01	46	5593	5308	5/19/16	2/21/17	Scaffold	SC	SAMEA2273882	GCA_900085975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/975/GCA_900085975.1_12082_2_18	-	k1499
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.59116	57.1	-	FLHU01	47	5675	5435	5/19/16	2/21/17	Scaffold	SC	SAMEA2273884	GCA_900085985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/985/GCA_900085985.1_12082_2_20	-	k2252
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	4.07577	39.1	-	FPEZ01	97	3984	3741	11/9/16	3/20/17	Scaffold	SC	SAMEA1466032	GCA_900117675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/675/GCA_900117675.1_7468_1_46	-	Ab46
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40676	66.4	-	LEJS01	153	6118	5918	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566450	GCA_001036575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/575/GCA_001036575.1_ASM103657v1	-	Pae_CF67.12g
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	1.97255	39.6	-	MQRU01	80	2179	1957	12/20/16	3/14/17	Contig	JCVI	SAMN05774314	GCA_001910295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/295/GCA_001910295.1_ASM191029v1	-	MMC_B04
Escherichia coli p0305293.2	1116090	PRJNA77415	77415	Proteobacteria	Gammaproteobacteria	5.05997	50.4	-	AQBX01	151	5482	5036	4/8/13	2/24/17	Contig	IGS	SAMN00829541	GCA_000358635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/635/GCA_000358635.2_ASM35863v2	-	p0305293.2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38704	65.6	-	MMAL01	3	4258	4103	10/25/16	3/13/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919646	GCA_001845405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/405/GCA_001845405.1_ASM184540v1	-	I0004342-7
Salmonella enterica subsp. enterica serovar Kentucky str. SA20030505	1242102	PRJNA177315	177315	Proteobacteria	Gammaproteobacteria	4.80207	52.1	-	LHTA01	21	4827	4544	11/27/15	3/1/17	Contig	Laboratory for Foodborne Zoonoses	SAMN03485833	GCA_001448485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/485/GCA_001448485.1_ASM144848v1	26941156	SA20030505
Staphylococcus aureus F46785	1412726	PRJNA225144	225144	Terrabacteria group	Firmicutes	2.92437	32.7	-	JEPB01	7	3086	2918	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02385466	GCA_000577175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/175/GCA_000577175.1_Stap_aure_F46785_V1	-	F46785
Staphylococcus aureus F46798	1412727	PRJNA225145	225145	Terrabacteria group	Firmicutes	2.94675	32.9	-	JEPC01	31	3112	2927	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02385467	GCA_000577195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/195/GCA_000577195.1_Stap_aure_F46798_V1	-	F46798
Salmonella enterica subsp. enterica serovar Itami str. SA20014991	1242100	PRJNA177232	177232	Proteobacteria	Gammaproteobacteria	4.73795	52.1	-	LHSY01	23	4925	4578	11/27/15	3/1/17	Contig	Laboratory for Foodborne Zoonoses	SAMN03485850	GCA_001448495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/495/GCA_001448495.1_ASM144849v1	26941156	SA20014991
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40601	65.6	-	MMAK01	7	4282	4132	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919647	GCA_001845415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/415/GCA_001845415.1_ASM184541v1	-	I0005224-6
Escherichia coli p0305293.3	1116091	PRJNA77417	77417	Proteobacteria	Gammaproteobacteria	5.06383	50.4	-	AQBY01	160	5504	5031	4/8/13	2/24/17	Contig	IGS	SAMN00829542	GCA_000358655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/655/GCA_000358655.2_ASM35865v2	-	p0305293.3
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	2.02	39.6	-	MQRR01	92	2248	2004	12/20/16	3/14/17	Contig	JCVI	SAMN05774310	GCA_001910385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/385/GCA_001910385.1_ASM191038v1	-	MMC_A08
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40751	66.4	-	LEJT01	117	6145	5926	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566451	GCA_001036585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/585/GCA_001036585.1_ASM103658v1	-	Pae_CF67.12h
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.97768	39	-	FPFC01	74	3840	3690	11/9/16	3/20/17	Scaffold	SC	SAMEA1465992	GCA_900117685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/685/GCA_900117685.1_7468_1_8	-	Ab8
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.532	57.2	-	FLHY01	75	5535	5271	5/19/16	2/21/17	Scaffold	SC	SAMEA2273885	GCA_900085995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/085/995/GCA_900085995.1_12082_2_21	-	k2235
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.66132	57	-	FLHV01	132	5790	5443	5/19/16	2/21/17	Scaffold	SC	SAMEA2273880	GCA_900086005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/005/GCA_900086005.1_12082_2_16	-	k298
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.85488	39	-	FPFH01	88	3698	3550	11/9/16	3/20/17	Scaffold	SC	SAMEA1466003	GCA_900117695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/695/GCA_900117695.1_7468_1_28	-	Ab28
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39996	66.4	-	LEJU01	166	6112	5917	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566452	GCA_001036605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/605/GCA_001036605.1_ASM103660v1	-	Pae_CF67.12i
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	1.95829	39.6	-	MQRO01	80	2175	1951	12/20/16	3/14/17	Contig	JCVI	SAMN05774307	GCA_001910445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/445/GCA_001910445.1_ASM191044v1	-	MMC_A05
Escherichia coli p0305293.4	1116092	PRJNA77419	77419	Proteobacteria	Gammaproteobacteria	5.06563	50.5	-	AQBZ01	243	5527	5037	4/8/13	2/25/17	Contig	IGS	SAMN00829543	GCA_000358675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/675/GCA_000358675.2_ASM35867v2	-	p0305293.4
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40329	65.6	-	MMAH01	16	4284	4116	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919650	GCA_001845485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/485/GCA_001845485.1_ASM184548v1	-	I0002081-3
Salmonella enterica subsp. enterica serovar Pullorum	605	PRJNA177593	177593	Proteobacteria	Gammaproteobacteria	4.90178	52.2	-	LHTF01	19	5058	4556	11/27/15	3/1/17	Contig	Laboratory for Foodborne Zoonoses	SAMN03569138	GCA_001448575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/575/GCA_001448575.1_ASM144857v1	26941156	S4037-07
Staphylococcus aureus F50093	1412729	PRJNA225147	225147	Terrabacteria group	Firmicutes	2.90246	32.8	-	JEPD01	5	3037	2883	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02385469	GCA_000577215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/215/GCA_000577215.1_Stap_aure_F50093_V1	-	F50093
Staphylococcus aureus F50121	1412730	PRJNA225148	225148	Terrabacteria group	Firmicutes	2.91282	33	-	JEPE01	14	3064	2888	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02385470	GCA_000577235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/235/GCA_000577235.1_Stap_aure_F50121_V1	-	F50121
Salmonella enterica subsp. enterica serovar Dublin str. SA20093032	1242092	PRJNA177209	177209	Proteobacteria	Gammaproteobacteria	4.91423	52.1	-	LHSQ01	13	5058	4712	11/27/15	3/1/17	Contig	Laboratory for Foodborne Zoonoses	SAMN03468238	GCA_001448615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/615/GCA_001448615.1_ASM144861v1	26941156	SA20093032
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39189	65.6	-	MMAG01	13	4269	4108	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919651	GCA_001845495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/495/GCA_001845495.1_ASM184549v1	-	I0004829-3
Escherichia coli p0305293.8	1116096	PRJNA77427	77427	Proteobacteria	Gammaproteobacteria	5.07472	50.4	-	AQCD01	163	5509	5039	4/8/13	2/25/17	Contig	IGS	SAMN00829547	GCA_000358695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/695/GCA_000358695.2_ASM35869v2	-	p0305293.8
Streptococcus pneumoniae	1313	PRJNA342807	342807	Terrabacteria group	Firmicutes	1.97149	39.7	-	MQRN01	68	2159	1921	12/20/16	3/14/17	Contig	JCVI	SAMN05774306	GCA_001935995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/935/995/GCA_001935995.1_ASM193599v1	-	MMC_A04
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.41235	66.4	-	LEJV01	90	6127	5948	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566453	GCA_001036645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/645/GCA_001036645.1_ASM103664v1	-	Pae_CF67.12j
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.8272	39	-	FPFX01	71	3665	3498	11/9/16	3/20/17	Scaffold	SC	SAMEA1466033	GCA_900117705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/705/GCA_900117705.1_7468_1_22	-	Ab22
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.49369	57.2	-	FLHW01	77	5516	5228	5/19/16	2/25/17	Scaffold	SC	SAMEA2273881	GCA_900086015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/015/GCA_900086015.1_12082_2_17	-	k1199
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.59323	57.1	-	FLHZ01	56	5600	5350	5/19/16	2/21/17	Scaffold	SC	SAMEA2273886	GCA_900086025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/025/GCA_900086025.1_12082_2_22	-	e1602
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	4.02645	39	-	FPFE01	90	3902	3746	11/9/16	3/20/17	Scaffold	SC	SAMEA1466057	GCA_900117715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/715/GCA_900117715.1_7468_1_34	-	Ab34
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40306	66.3	-	LEJW01	182	6127	5906	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566454	GCA_001036655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/655/GCA_001036655.1_ASM103665v1	-	Pae_CF67.12k
Streptococcus pneumoniae	1313	PRJNA348174	348174	Terrabacteria group	Firmicutes	2.05739	39.7	-	MLQV01	46	2215	1997	1/6/17	3/15/17	Contig	LAU	SAMN05905556	GCA_001937965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/965/GCA_001937965.1_ASM193796v1	-	STREP-LEB
Escherichia coli p0305293.9	1116097	PRJNA77429	77429	Proteobacteria	Gammaproteobacteria	4.80763	50.7	-	AQCE01	193	5133	4734	4/8/13	2/24/17	Contig	IGS	SAMN00829548	GCA_000358715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/715/GCA_000358715.2_ASM35871v2	-	p0305293.9
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39236	65.6	-	MMAF01	1	4262	4101	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919652	GCA_001845515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/515/GCA_001845515.1_ASM184551v1	-	I0004557-0
Salmonella enterica subsp. enterica serovar Gallinarum	594	PRJNA242812	242812	Proteobacteria	Gammaproteobacteria	4.6735	52.2	-	LHST01	10	4766	4283	11/27/15	3/1/17	Contig	Laboratory for Foodborne Zoonoses	SAMN03892446	GCA_001448635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/635/GCA_001448635.1_ASM144863v1	26941156	ST572
Staphylococcus aureus F53393	1412733	PRJNA225151	225151	Terrabacteria group	Firmicutes	3.02223	32.7	-	JEPF01	5	3224	3068	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02385473	GCA_000577305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/305/GCA_000577305.1_Stap_aure_F53393_V1	-	F53393
Staphylococcus aureus F53399	1412734	PRJNA225152	225152	Terrabacteria group	Firmicutes	2.8957	32.9	-	JEPG01	30	3051	2874	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02385474	GCA_000577365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/365/GCA_000577365.1_Stap_aure_F53399_V1	-	F53399
Salmonella enterica subsp. enterica serovar Gaminara str. SA20063285	1242094	PRJNA177212	177212	Proteobacteria	Gammaproteobacteria	4.97538	52.1	-	LHSU01	20	5120	4838	11/27/15	3/1/17	Contig	Laboratory for Foodborne Zoonoses	SAMN03470707	GCA_001448665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/665/GCA_001448665.1_ASM144866v1	26941156	SA20063285
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3991	65.6	-	MMAE01	8	4264	4096	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919653	GCA_001845545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/545/GCA_001845545.1_ASM184554v1	-	I0002006-0
Escherichia coli P0302308.12	1116160	PRJNA77557	77557	Proteobacteria	Gammaproteobacteria	5.16177	50.7	-	APZB01	197	5537	5077	4/8/13	5/18/17	Contig	IGS	SAMN00829425	GCA_000358735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/735/GCA_000358735.1_ASM35873v1	-	P0302308.12
Streptococcus pneumoniae CCCB	1165093	PRJNA110521	110521	Terrabacteria group	Firmicutes	2.02974	39.6	-	AMCL01	55	2230	1993	1/12/17	3/15/17	Contig	University of Kaiserslautern	SAMN06220443	GCA_001950975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/975/GCA_001950975.1_ASM195097v1	22931193	CCCB
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40191	66.4	-	LEJX01	194	6123	5907	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566455	GCA_001036675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/675/GCA_001036675.1_ASM103667v1	-	Pae_CF67.12l
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	4.03625	38.9	-	FPFF01	85	3897	3742	11/9/16	3/20/17	Scaffold	SC	SAMEA1466022	GCA_900117725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/725/GCA_900117725.1_7468_1_40	-	Ab40
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.55006	57	-	FLIA01	97	5670	5371	5/19/16	2/21/17	Scaffold	SC	SAMEA2273526	GCA_900086035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/035/GCA_900086035.1_12082_4_68	-	k228
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.61594	57.1	-	FLID01	84	5630	5354	5/19/16	2/21/17	Scaffold	SC	SAMEA2273535	GCA_900086045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/045/GCA_900086045.1_12082_4_70	-	k302
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.93595	39	-	FPFI01	80	3781	3638	11/9/16	3/20/17	Scaffold	SC	SAMEA1465998	GCA_900117735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/735/GCA_900117735.1_7468_1_18	-	Ab18
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.42152	66.3	-	LEJY01	146	6136	5934	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566456	GCA_001036685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/685/GCA_001036685.1_ASM103668v1	-	Pae_CF67.12m
Streptococcus pneumoniae	1313	PRJNA309392	309392	Terrabacteria group	Firmicutes	1.8798	39.8	-	LSMB01	108	2037	1826	3/6/17	3/9/17	Contig	University of Mississippi Medical Center	SAMN04432555	GCA_002021715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/021/715/GCA_002021715.1_ASM202171v1	-	C144.66
Escherichia coli 178850	1116106	PRJNA77447	77447	Proteobacteria	Gammaproteobacteria	5.10813	51.1	-	APWZ01	782	5616	5044	4/8/13	2/25/17	Contig	IGS	SAMN00829231	GCA_000358755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/755/GCA_000358755.2_ASM35875v2	-	178850
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40868	65.6	-	MMAD01	16	4295	4117	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05919654	GCA_001845565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/565/GCA_001845565.1_ASM184556v1	-	C0012831-5
Salmonella enterica subsp. enterica serovar Hadar str. SA20026260	1242095	PRJNA177214	177214	Proteobacteria	Gammaproteobacteria	4.89614	52.1	-	LHSV01	23	4994	4730	11/27/15	3/1/17	Contig	Laboratory for Foodborne Zoonoses	SAMN03470768	GCA_001448685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/685/GCA_001448685.1_ASM144868v1	26941156	SA20026260
Staphylococcus aureus F53404	1412735	PRJNA225153	225153	Terrabacteria group	Firmicutes	2.84597	32.9	-	JEPH01	17	2946	2797	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02385475	GCA_000577405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/405/GCA_000577405.1_Stap_aure_F53404_V1	-	F53404
Staphylococcus aureus H16097	1412742	PRJNA225160	225160	Terrabacteria group	Firmicutes	2.87739	32.7	-	JEPI01	10	3041	2884	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02385482	GCA_000577435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/435/GCA_000577435.1_Stap_aure_H16097_V1	-	H16097
Salmonella enterica subsp. enterica serovar Hvittingfoss str. SA20014981	1242097	PRJNA177216	177216	Proteobacteria	Gammaproteobacteria	4.89909	52.1	-	LHSW01	12	4980	4722	11/27/15	3/1/17	Contig	Laboratory for Foodborne Zoonoses	SAMN03470763	GCA_001448705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/705/GCA_001448705.1_ASM144870v1	26941156	SA20014981
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34508	65.6	-	MMUM01	30	4248	4071	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918617	GCA_001845625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/625/GCA_001845625.1_ASM184562v1	-	99-02025
Escherichia coli P0301867.7	1116070	PRJNA77375	77375	Proteobacteria	Gammaproteobacteria	5.20344	50.7	-	APYX01	134	5534	5036	4/8/13	2/25/17	Contig	IGS	SAMN00829406	GCA_000358775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/775/GCA_000358775.2_ASM35877v2	-	P0301867.7
Streptococcus pneumoniae	1313	PRJNA320775	320775	Terrabacteria group	Firmicutes	2.25166	39.4	-	LXPL01	480	2450	2170	4/14/17	4/21/17	Contig	The Research Institute at Nationwide Children's Hospital	SAMN04957376	GCA_002093335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/335/GCA_002093335.1_ASM209333v1	27469261	ABC010014041
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39838	66.4	-	LEJZ01	211	6121	5890	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566457	GCA_001036725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/725/GCA_001036725.1_ASM103672v1	-	Pae_CF67.12n
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	4.00305	39	-	FPFK01	99	3883	3728	11/9/16	3/20/17	Scaffold	SC	SAMEA1466083	GCA_900117745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/745/GCA_900117745.1_7468_1_17	-	Ab17
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.22882	57.4	-	FLIB01	40	5210	4994	5/19/16	2/25/17	Scaffold	SC	SAMEA2273529	GCA_900086055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/055/GCA_900086055.1_12082_4_69	-	k250
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.54203	57.1	-	FLIE01	69	5579	5275	5/19/16	2/21/17	Scaffold	SC	SAMEA2273543	GCA_900086065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/065/GCA_900086065.1_12082_4_72	-	k361
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.83191	39	-	FPFS01	74	3671	3515	11/9/16	3/20/17	Scaffold	SC	SAMEA1466047	GCA_900117755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/755/GCA_900117755.1_7468_1_33	-	Ab33
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.4066	66.4	-	LEKA01	169	6135	5905	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566458	GCA_001036735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/735/GCA_001036735.1_ASM103673v1	-	Pae_CF67.12o
Streptococcus pneumoniae	1313	PRJNA319648	319648	Terrabacteria group	Firmicutes	2.18376	39.5	-	LXJK01	289	2348	2097	4/14/17	4/21/17	Contig	The Research Institute at Nationwide Children's Hospital	SAMN04902339	GCA_002093345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/345/GCA_002093345.1_ASM209334v1	27469261	ABC010002074
Escherichia coli P0299917.8	1116054	PRJNA77343	77343	Proteobacteria	Gammaproteobacteria	5.31412	50.5	-	APYR01	183	5791	5302	4/8/13	2/25/17	Contig	IGS	SAMN00829370	GCA_000358795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/795/GCA_000358795.2_ASM35879v2	-	P0299917.8
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36946	65.5	-	MMQG01	76	4293	4102	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918728	GCA_001845665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/665/GCA_001845665.1_ASM184566v1	-	02-R1514
Salmonella enterica subsp. enterica serovar Manhattan str. SA20034532	1243576	PRJNA177571	177571	Proteobacteria	Gammaproteobacteria	4.63442	52.2	-	LHTB01	12	4666	4422	11/27/15	3/1/17	Contig	Laboratory for Foodborne Zoonoses	SAMN03485843	GCA_001448765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/765/GCA_001448765.1_ASM144876v1	26941156	SA20034532
Staphylococcus aureus H19476	1412743	PRJNA225161	225161	Terrabacteria group	Firmicutes	2.93067	32.8	-	JEPJ01	13	3064	2910	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02385483	GCA_000577455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/455/GCA_000577455.1_Stap_aure_H19476_V1	-	H19476
Staphylococcus aureus H25869	1412744	PRJNA225162	225162	Terrabacteria group	Firmicutes	2.98912	32.7	-	JEPK01	10	3166	3001	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02385484	GCA_000577475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/475/GCA_000577475.1_Stap_aure_H25869_V1	-	H25869
Salmonella enterica subsp. enterica serovar Milwaukee str. SA19950795	1243578	PRJNA177577	177577	Proteobacteria	Gammaproteobacteria	5.03753	52.2	-	LHTC01	29	5195	4865	11/27/15	3/1/17	Contig	Laboratory for Foodborne Zoonoses	SAMN03485849	GCA_001448785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/785/GCA_001448785.1_ASM144878v1	26941156	SA19950795
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39836	65.6	-	MMUN01	41	4289	4115	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918616	GCA_001845675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/675/GCA_001845675.1_ASM184567v1	-	98-R515
Escherichia coli P0298942.14	1116150	PRJNA77537	77537	Proteobacteria	Gammaproteobacteria	5.06412	50.5	-	APXT01	205	5553	4930	4/8/13	5/18/17	Contig	IGS	SAMN00829343	GCA_000358815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/815/GCA_000358815.1_ASM35881v1	-	P0298942.14
Streptococcus pneumoniae	1313	PRJNA320738	320738	Terrabacteria group	Firmicutes	2.21566	39.5	-	LXPJ01	181	2400	2140	4/14/17	4/21/17	Contig	The Research Institute at Nationwide Children's Hospital	SAMN04956519	GCA_002093355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/355/GCA_002093355.1_ASM209335v1	27469261	ABC010013051
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40782	66.4	-	LEKB01	128	6110	5937	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566459	GCA_001036765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/765/GCA_001036765.1_ASM103676v1	-	Pae_CF67.12p
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.91581	39	-	FPFJ01	71	3792	3642	11/9/16	3/20/17	Scaffold	SC	SAMEA1465993	GCA_900117765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/765/GCA_900117765.1_7468_1_29	-	Ab29
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.36274	57.4	-	FLIF01	56	5384	5132	5/19/16	2/21/17	Scaffold	SC	SAMEA2273564	GCA_900086075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/075/GCA_900086075.1_12082_4_73	-	k519
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.53324	57.1	-	FLIH01	68	5549	5257	5/19/16	2/21/17	Scaffold	SC	SAMEA2273577	GCA_900086085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/085/GCA_900086085.1_12082_4_74	-	k618
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.82651	39	-	FPFU01	70	3666	3509	11/9/16	3/20/17	Scaffold	SC	SAMEA1466036	GCA_900117775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/775/GCA_900117775.1_7468_1_23	-	Ab23
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40975	66.4	-	LEKC01	156	6115	5925	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566460	GCA_001036775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/775/GCA_001036775.1_ASM103677v1	-	Pae_CF67.12q
Streptococcus pneumoniae	1313	PRJNA320753	320753	Terrabacteria group	Firmicutes	2.26355	39.6	-	LXPK01	321	2428	2203	4/14/17	4/21/17	Contig	The Research Institute at Nationwide Children's Hospital	SAMN04957169	GCA_002093365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/365/GCA_002093365.1_ASM209336v1	27469261	ABC010008233
Escherichia coli P0301867.3	1116067	PRJNA77369	77369	Proteobacteria	Gammaproteobacteria	5.15955	50.7	-	APYU01	133	5502	5012	4/8/13	2/25/17	Contig	IGS	SAMN00829403	GCA_000358835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/835/GCA_000358835.2_ASM35883v2	-	P0301867.3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39595	65.6	-	MMQP01	26	4296	4114	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918718	GCA_001845745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/745/GCA_001845745.1_ASM184574v1	-	05-14290
Salmonella enterica subsp. enterica serovar Panama str. SA20030878	1243587	PRJNA177591	177591	Proteobacteria	Gammaproteobacteria	4.80321	51.9	-	LHTD01	44	4928	4604	11/27/15	3/1/17	Contig	Laboratory for Foodborne Zoonoses	SAMN03485882	GCA_001448795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/795/GCA_001448795.1_ASM144879v1	26941156	SA20030878
Staphylococcus aureus M16552	1412759	PRJNA225177	225177	Terrabacteria group	Firmicutes	2.93662	32.9	-	JEPL01	14	3120	2945	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02385499	GCA_000577505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/505/GCA_000577505.1_Stap_aure_M16552_V1	-	M16552
Staphylococcus aureus T57402	1412788	PRJNA225206	225206	Terrabacteria group	Firmicutes	2.85869	33	-	JEPM01	15	2976	2808	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02385528	GCA_000577525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/525/GCA_000577525.1_Stap_aure_T57402_V1	-	T57402
Salmonella enterica subsp. enterica serovar Paratyphi A str. SA19950809	1243588	PRJNA177592	177592	Proteobacteria	Gammaproteobacteria	4.5397	52.2	-	LHTE01	12	4631	4254	11/27/15	3/1/17	Contig	Laboratory for Foodborne Zoonoses	SAMN03487300	GCA_001448825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/825/GCA_001448825.1_ASM144882v1	26941156	SA19950809
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40419	65.6	-	MMQI01	23	4285	4109	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918725	GCA_001845795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/795/GCA_001845795.1_ASM184579v1	-	02-R1149
Escherichia coli P0301867.5	1116069	PRJNA77373	77373	Proteobacteria	Gammaproteobacteria	5.20584	50.7	-	APYW01	135	5549	5049	4/8/13	2/25/17	Contig	IGS	SAMN00829405	GCA_000358855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/855/GCA_000358855.2_ASM35885v2	-	P0301867.5
Streptococcus pneumoniae	1313	PRJNA320777	320777	Terrabacteria group	Firmicutes	2.19257	39.6	-	LXPN01	206	2366	2147	4/14/17	4/21/17	Contig	The Research Institute at Nationwide Children's Hospital	SAMN04957378	GCA_002093445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/445/GCA_002093445.1_ASM209344v1	27469261	ABC010026322
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40341	66.4	-	LEKD01	134	6113	5935	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566461	GCA_001036805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/805/GCA_001036805.1_ASM103680v1	-	Pae_CF67.12r
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.85558	39	-	FPFM01	73	3705	3544	11/9/16	3/20/17	Scaffold	SC	SAMEA1466035	GCA_900117795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/795/GCA_900117795.1_7468_1_32	-	Ab32
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.31385	57.5	-	FLIG01	41	5226	4991	5/19/16	2/21/17	Scaffold	SC	SAMEA2273586	GCA_900086095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/095/GCA_900086095.1_12082_4_75	-	k722
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.55384	57.2	-	FLII01	51	5578	5264	5/19/16	2/21/17	Scaffold	SC	SAMEA2273593	GCA_900086105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/105/GCA_900086105.1_12082_4_76	-	k809
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.94961	39.1	-	FPGA01	81	3819	3663	11/9/16	3/20/17	Scaffold	SC	SAMEA1466043	GCA_900117805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/805/GCA_900117805.1_7468_1_13	-	Ab13
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40586	66.4	-	LEEU01	140	6127	5934	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566322	GCA_001036815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/815/GCA_001036815.1_ASM103681v1	-	Pae_CF67.05q
Streptococcus pneumoniae	1313	PRJNA320776	320776	Terrabacteria group	Firmicutes	2.13676	39.7	-	LXPM01	281	2282	2055	4/14/17	4/21/17	Contig	The Research Institute at Nationwide Children's Hospital	SAMN04957377	GCA_002093455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/455/GCA_002093455.1_ASM209345v1	27469261	ABC010016366
Escherichia coli P0302308.10	1116158	PRJNA77553	77553	Proteobacteria	Gammaproteobacteria	5.22203	50.7	-	APYZ01	142	5530	5109	4/8/13	5/18/17	Contig	IGS	SAMN00829420	GCA_000358875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/875/GCA_000358875.1_ASM35887v1	-	P0302308.10
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38452	65.6	-	MMUO01	15	4263	4099	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918615	GCA_001845835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/835/GCA_001845835.1_ASM184583v1	-	97-R495
Salmonella enterica subsp. enterica serovar Rubislaw str. SA20030553	1240693	PRJNA177071	177071	Proteobacteria	Gammaproteobacteria	4.93129	51.9	-	LHTG01	31	5051	4681	11/27/15	3/1/17	Contig	Laboratory for Foodborne Zoonoses	SAMN03470770	GCA_001448845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/845/GCA_001448845.1_ASM144884v1	26941156	SA20030553
Staphylococcus aureus T67319	1412793	PRJNA225211	225211	Terrabacteria group	Firmicutes	2.90492	32.7	-	JEPN01	6	3059	2893	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02385533	GCA_000577565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/565/GCA_000577565.1_Stap_aure_T67319_V1	-	T67319
Staphylococcus aureus W29625	1412798	PRJNA225216	225216	Terrabacteria group	Firmicutes	2.98215	32.8	-	JEPO01	7	3192	3029	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02385538	GCA_000577625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/625/GCA_000577625.1_Stap_aure_W29625_V1	-	W29625
"Salmonella enterica subsp. salamae serovar 56:z10:e,n,x str. 1369-73"	1243604	PRJNA177610	177610	Proteobacteria	Gammaproteobacteria	4.79686	52	-	LHTH01	28	4762	4408	11/27/15	3/1/17	Contig	Laboratory for Foodborne Zoonoses	SAMN03470772	GCA_001448865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/865/GCA_001448865.1_ASM144886v1	26941156	1369-73
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38622	65.6	-	MMQE01	10	4278	4115	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918730	GCA_001845865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/865/GCA_001845865.1_ASM184586v1	-	03-R0023
Escherichia coli 178200	1116107	PRJNA77449	77449	Proteobacteria	Gammaproteobacteria	4.6155	51.3	-	APWY01	433	4819	4444	4/8/13	5/18/17	Contig	IGS	SAMN00829003	GCA_000358895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/895/GCA_000358895.1_ASM35889v1	-	178200
Streptococcus pneumoniae	1313	PRJNA389151	389151	Terrabacteria group	Firmicutes	2.06311	39.7	-	NIFF01	93	2285	2019	7/24/17	7/28/17	Contig	christian Medical College	SAMN07191007	GCA_002224185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/185/GCA_002224185.1_ASM222418v1	-	TVM3
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.3983	66.4	-	LEEV01	243	6108	5880	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566323	GCA_001036825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/825/GCA_001036825.1_ASM103682v1	-	Pae_CF67.05r
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.97855	39	-	FPFT01	73	3839	3688	11/9/16	3/20/17	Scaffold	SC	SAMEA1466019	GCA_900117815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/815/GCA_900117815.1_7468_1_6	-	Ab6
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.50153	57.2	-	FLIJ01	45	5580	5334	5/21/16	2/21/17	Scaffold	SC	SAMEA2273594	GCA_900086115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/115/GCA_900086115.1_12082_4_77	-	k810
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.50904	57.2	-	FLIK01	40	5561	5283	5/19/16	2/25/17	Scaffold	SC	SAMEA2273595	GCA_900086125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/125/GCA_900086125.1_12082_4_78	-	k813
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.9775	39.1	-	FPFQ01	87	3846	3696	11/9/16	3/20/17	Scaffold	SC	SAMEA1466006	GCA_900117825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/825/GCA_900117825.1_7468_1_48	-	Ab48
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.4089	66.4	-	LEEX01	114	6128	5942	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566325	GCA_001036835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/835/GCA_001036835.1_ASM103683v1	-	Pae_CF67.05t
Streptococcus pneumoniae	1313	PRJNA389151	389151	Terrabacteria group	Firmicutes	2.04613	39.8	-	NIFG01	95	2271	2005	7/24/17	7/28/17	Contig	christian Medical College	SAMN07191006	GCA_002224195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/195/GCA_002224195.1_ASM222419v1	-	B44415
Escherichia coli P0298942.12	1116149	PRJNA77535	77535	Proteobacteria	Gammaproteobacteria	5.04874	50.5	-	APXS01	202	5547	4927	4/8/13	5/18/17	Contig	IGS	SAMN00829342	GCA_000358915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/915/GCA_000358915.1_ASM35891v1	-	P0298942.12
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38824	65.6	-	MMPZ01	25	4276	4100	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918735	GCA_001845875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/875/GCA_001845875.1_ASM184587v1	-	02-R1151
Salmonella enterica subsp. enterica serovar Virginia str. SA19971529	1243594	PRJNA177598	177598	Proteobacteria	Gammaproteobacteria	4.80577	52.1	-	LHTI01	14	4899	4641	11/27/15	3/1/17	Contig	Laboratory for Foodborne Zoonoses	SAMN03487301	GCA_001448885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/885/GCA_001448885.1_ASM144888v1	26941156	SA19971529
Staphylococcus aureus W39821	1412806	PRJNA225224	225224	Terrabacteria group	Firmicutes	2.89141	32.9	-	JEPP01	7	3002	2834	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02385546	GCA_000577685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/685/GCA_000577685.1_Stap_aure_W39821_V1	-	W39821
Staphylococcus aureus W50110	1412812	PRJNA225230	225230	Terrabacteria group	Firmicutes	2.9255	32.7	-	JEPQ01	13	3101	2943	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02385552	GCA_000577735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/735/GCA_000577735.1_Stap_aure_W50110_V1	-	W50110
Salmonella enterica subsp. enterica serovar Weslaco str. 247K	1243598	PRJNA177607	177607	Proteobacteria	Gammaproteobacteria	4.56732	52.1	-	LHTJ01	23	4600	4274	11/27/15	3/1/17	Contig	Laboratory for Foodborne Zoonoses	SAMN03470771	GCA_001448905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/905/GCA_001448905.1_ASM144890v1	26941156	247K
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38965	65.6	-	MMQA01	28	4280	4079	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918734	GCA_001845945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/945/GCA_001845945.1_ASM184594v1	-	04-R0265
Escherichia coli P0302308.14	1116162	PRJNA77561	77561	Proteobacteria	Gammaproteobacteria	5.20313	50.7	-	APZD01	157	5507	5084	4/8/13	2/25/17	Contig	IGS	SAMN00829428	GCA_000358935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/935/GCA_000358935.2_ASM35893v2	-	P0302308.14
Streptococcus pneumoniae E709	1449354	PRJNA235160	235160	Terrabacteria group	Firmicutes	2.15512	39.6	-	JBOR01	37	2365	2021	8/11/17	8/11/17	Contig	Carnegie Mellon University	SAMN02691894	GCA_002249615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/615/GCA_002249615.1_ASM224961v1	-	E709
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.38933	66.4	-	LEEY01	160	6151	5770	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566326	GCA_001036885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/885/GCA_001036885.1_ASM103688v1	-	Pae_CF67.06a
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.9508	39.1	-	FPFN01	78	3823	3658	11/9/16	3/20/17	Scaffold	SC	SAMEA1466070	GCA_900117835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/835/GCA_900117835.1_7468_1_11	-	Ab11
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.36346	57.4	-	FLIL01	39	5410	5140	5/19/16	2/21/17	Scaffold	SC	SAMEA2273613	GCA_900086135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/135/GCA_900086135.1_12082_4_79	-	k767
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.48982	57.3	-	FLIN01	70	5512	5248	5/19/16	2/21/17	Scaffold	SC	SAMEA2273626	GCA_900086145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/145/GCA_900086145.1_12082_4_81	-	k951
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.82698	39	-	FPFO01	70	3663	3511	11/9/16	3/20/17	Scaffold	SC	SAMEA1466013	GCA_900117845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/845/GCA_900117845.1_7468_1_27	-	Ab27
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39477	66.4	-	LEFA01	139	6126	5797	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566328	GCA_001036895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/895/GCA_001036895.1_ASM103689v1	-	Pae_CF67.06c
Streptococcus pneumoniae K2521	1449967	PRJNA235267	235267	Terrabacteria group	Firmicutes	2.18481	39.6	-	JBOS01	32	2391	2073	8/11/17	8/11/17	Contig	Carnegie Mellon University	SAMN02691895	GCA_002249685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/685/GCA_002249685.1_ASM224968v1	-	K2521
Escherichia coli P0304816.5	1116181	PRJNA77599	77599	Proteobacteria	Gammaproteobacteria	5.26416	50.5	-	AQBC01	196	5617	5152	4/8/13	2/25/17	Contig	IGS	SAMN00829514	GCA_000358955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/955/GCA_000358955.2_ASM35895v2	-	P0304816.5
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40036	65.6	-	MMQK01	73	4318	4129	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918723	GCA_001845975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/975/GCA_001845975.1_ASM184597v1	-	99-R647
Salmonella enterica subsp. arizonae serovar 62:z36:- str. 5335/86	1245396	PRJNA177612	177612	Proteobacteria	Gammaproteobacteria	4.62535	51.4	-	LHTK01	20	4671	4184	11/27/15	3/1/17	Contig	Laboratory for Foodborne Zoonoses	SAMN03470773	GCA_001448925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/925/GCA_001448925.1_ASM144892v1	26941156	5335/86
Staphylococcus aureus F60349	1417032	PRJNA226783	226783	Terrabacteria group	Firmicutes	2.84995	32.8	-	JEPR01	32	2960	2834	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398724	GCA_000577775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/775/GCA_000577775.1_Stap_aure_F60349_V1	-	F60349
Staphylococcus aureus W46839	1417033	PRJNA226784	226784	Terrabacteria group	Firmicutes	2.89522	32.7	-	JEPS01	15	3056	2892	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398725	GCA_000577835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/835/GCA_000577835.1_Stap_aure_W46839_V1	-	W46839
"Salmonella enterica subsp. arizonae serovar 63:g,z51:- str. So 20/20"	1243608	PRJNA177614	177614	Proteobacteria	Gammaproteobacteria	4.57379	51.4	-	LHTL01	14	4638	4163	11/27/15	3/1/17	Contig	Laboratory for Foodborne Zoonoses	SAMN03470774	GCA_001448945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/945/GCA_001448945.1_ASM144894v1	26941156	So 20/20
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40661	65.6	-	MMQT01	33	4291	4115	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918714	GCA_001846095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/095/GCA_001846095.1_ASM184609v1	-	05-13060
Escherichia coli P0302308.13	1116161	PRJNA77559	77559	Proteobacteria	Gammaproteobacteria	5.1052	50.9	-	APZC01	360	5478	5007	4/8/13	2/25/17	Contig	IGS	SAMN00829426	GCA_000358975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/975/GCA_000358975.2_ASM35897v2	-	P0302308.13
Streptococcus pneumoniae K2527	1449968	PRJNA235268	235268	Terrabacteria group	Firmicutes	2.18029	39.8	-	JBOT01	29	2387	2051	8/11/17	8/11/17	Contig	Carnegie Mellon University	SAMN02691896	GCA_002249695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/695/GCA_002249695.1_ASM224969v1	-	K2527
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.3851	66.4	-	LEEZ01	161	6133	5779	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566327	GCA_001036905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/905/GCA_001036905.1_ASM103690v1	-	Pae_CF67.06b
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	4.02693	39	-	FPFW01	91	3902	3741	11/9/16	3/20/17	Scaffold	SC	SAMEA1466073	GCA_900117855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/855/GCA_900117855.1_7468_1_35	-	Ab35
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.44836	57.2	-	FLIM01	70	5491	5212	5/19/16	2/21/17	Scaffold	SC	SAMEA2273621	GCA_900086155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/155/GCA_900086155.1_12082_4_80	-	k904
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.51212	57.2	-	FLIO01	58	5556	5326	5/19/16	2/21/17	Scaffold	SC	SAMEA2273627	GCA_900086165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/165/GCA_900086165.1_12082_4_82	-	k957
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.95112	39.1	-	FPFV01	79	3822	3657	11/9/16	3/20/17	Scaffold	SC	SAMEA1466071	GCA_900117865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/865/GCA_900117865.1_7468_1_16	-	Ab16
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.36099	66.3	-	LEFB01	297	6180	5582	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566329	GCA_001036915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/915/GCA_001036915.1_ASM103691v1	-	Pae_CF67.06d
Streptococcus pneumoniae K2557	1449969	PRJNA235269	235269	Terrabacteria group	Firmicutes	2.05168	39.8	-	JBOU01	111	2309	1856	8/11/17	8/11/17	Contig	Carnegie Mellon University	SAMN02691897	GCA_002249715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/715/GCA_002249715.1_ASM224971v1	-	K2557
Escherichia coli P0304816.14	1116190	PRJNA77617	77617	Proteobacteria	Gammaproteobacteria	5.17082	50.5	-	AQAX01	156	5503	5061	4/8/13	5/18/17	Contig	IGS	SAMN00829508	GCA_000358995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/358/995/GCA_000358995.1_ASM35899v1	-	P0304816.14
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36635	65.6	-	MMUH01	31	4271	4091	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918622	GCA_001846155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/155/GCA_001846155.1_ASM184615v1	-	99-09115
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA268965	268965	Proteobacteria	Gammaproteobacteria	5.00561	51.9	-	JUIU01	55	5120	4813	12/4/15	3/1/17	Contig	USFDA	SAMN03247185	GCA_001457355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/355/GCA_001457355.1_ASM145735v1	-	SK222_32B
Staphylococcus aureus F60357	1417034	PRJNA226785	226785	Terrabacteria group	Firmicutes	2.89588	32.7	-	JEPT01	11	3057	2895	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398726	GCA_000577915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/915/GCA_000577915.1_Stap_aure_F60357_V1	-	F60357
Staphylococcus aureus F60360	1417035	PRJNA226786	226786	Terrabacteria group	Firmicutes	2.90377	32.7	-	JEPU01	13	3059	2897	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398727	GCA_000577975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/975/GCA_000577975.1_Stap_aure_F60360_V1	-	F60360
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA268965	268965	Proteobacteria	Gammaproteobacteria	4.98949	52.1	-	JUIT01	72	5175	4922	12/4/15	3/1/17	Contig	USFDA	SAMN03247169	GCA_001457365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/365/GCA_001457365.1_ASM145736v1	-	ST221_31B
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38515	65.6	-	MMUG01	35	4269	4088	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918623	GCA_001846185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/185/GCA_001846185.1_ASM184618v1	-	97-R224
Escherichia coli P0304816.3	1116179	PRJNA77595	77595	Proteobacteria	Gammaproteobacteria	5.22354	50.5	-	AQBA01	176	5612	5127	4/8/13	2/25/17	Contig	IGS	SAMN00829511	GCA_000359015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/015/GCA_000359015.2_ASM35901v2	-	P0304816.3
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.17516	39.9	-	NOIL01	119	2425	2175	8/22/17	8/24/17	Contig	National Institute for Communicable Diseases	SAMN04337318	GCA_002265215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/215/GCA_002265215.1_ASM226521v1	-	20893-6B
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.3862	66.4	-	LEFC01	173	6145	5784	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566330	GCA_001036965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/965/GCA_001036965.1_ASM103696v1	-	Pae_CF67.06e
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.95002	39	-	FPFZ01	78	3825	3673	11/9/16	3/20/17	Scaffold	SC	SAMEA1466002	GCA_900117875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/875/GCA_900117875.1_7468_1_19	-	Ab19
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.85245	57.1	-	FLIQ01	103	5956	5628	5/19/16	2/25/17	Scaffold	SC	SAMEA2273633	GCA_900086175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/175/GCA_900086175.1_12082_4_83	-	k916
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.56012	57.1	-	FLIP01	51	5524	5278	5/19/16	2/21/17	Scaffold	SC	SAMEA2273640	GCA_900086185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/185/GCA_900086185.1_12082_4_85	-	k1037
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.82948	39	-	FPFY01	71	3675	3516	11/9/16	3/20/17	Scaffold	SC	SAMEA1466021	GCA_900117885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/885/GCA_900117885.1_7468_1_26	-	Ab26
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.38647	66.4	-	LEFD01	160	6151	5794	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566331	GCA_001036975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/975/GCA_001036975.1_ASM103697v1	-	Pae_CF67.06f
Streptococcus pneumoniae	1313	PRJNA398549	398549	Terrabacteria group	Firmicutes	2.05157	39.6	-	NQWA01	109	2274	1848	9/7/17	9/7/17	Contig	National Scientific and Practical Center of Children's Health	SAMN07512806	GCA_002287575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/575/GCA_002287575.1_ASM228757v1	-	Spn_999
Escherichia coli P0304816.4	1116180	PRJNA77597	77597	Proteobacteria	Gammaproteobacteria	5.20151	50.4	-	AQBB01	168	5598	5116	4/8/13	2/25/17	Contig	IGS	SAMN00829512	GCA_000359035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/035/GCA_000359035.2_ASM35903v2	-	P0304816.4
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39897	65.6	-	MMUE01	21	4282	4110	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918625	GCA_001846195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/195/GCA_001846195.1_ASM184619v1	-	98-R467
Salmonella enterica subsp. enterica serovar Paratyphi B	57045	PRJNA296856	296856	Proteobacteria	Gammaproteobacteria	5.02812	51.9	-	LKJJ01	75	5155	4839	12/14/15	2/21/17	Contig	Texas Tech University	SAMN04110136	GCA_001466355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/355/GCA_001466355.1_ASM146635v1	-	2012CEB2196SAL
Staphylococcus aureus W18442	1417038	PRJNA226789	226789	Terrabacteria group	Firmicutes	2.89025	32.8	-	JEPV01	44	3059	2895	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398730	GCA_000577995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/995/GCA_000577995.1_Stap_aure_W18442_V1	-	W18442
Staphylococcus aureus F63750	1417039	PRJNA226790	226790	Terrabacteria group	Firmicutes	2.88478	32.7	-	JEPW01	8	3037	2875	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398731	GCA_000578015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/015/GCA_000578015.1_Stap_aure_F63750_V1	-	F63750
Salmonella enterica subsp. enterica serovar Paratyphi B	57045	PRJNA296856	296856	Proteobacteria	Gammaproteobacteria	5.02588	51.9	-	LKJK01	115	5160	4831	12/14/15	2/21/17	Contig	Texas Tech University	SAMN04110137	GCA_001466365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/365/GCA_001466365.1_ASM146636v1	-	2012CEB4337SAL
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39403	65.6	-	MMUD01	29	4282	4110	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918626	GCA_001846235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/235/GCA_001846235.1_ASM184623v1	-	97-20984
Escherichia coli p0305293.5	1116093	PRJNA77421	77421	Proteobacteria	Gammaproteobacteria	5.06138	50.5	-	AQCA01	252	5530	5029	4/8/13	2/25/17	Contig	IGS	SAMN00829544	GCA_000359055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/055/GCA_000359055.2_ASM35905v2	-	p0305293.5
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.0999	39.6	-	CMIO01	61	2353	2100	3/23/15	3/13/17	Contig	SC	SAMEA1029218	GCA_900003765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/003/765/GCA_900003765.1_7038_7_17	-	SMRU3017
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.35627	66.3	-	LEFE01	334	6177	5524	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566332	GCA_001036985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/985/GCA_001036985.1_ASM103698v1	-	Pae_CF67.06g
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.97768	39	-	FPGC01	75	3841	3683	11/9/16	3/20/17	Scaffold	SC	SAMEA1466080	GCA_900117895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/895/GCA_900117895.1_7468_1_3	-	Ab3
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.53097	57	-	FLIR01	70	5547	5253	5/19/16	2/21/17	Scaffold	SC	SAMEA2273641	GCA_900086195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/195/GCA_900086195.1_12082_4_86	-	k1056
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.56412	57	-	FLIT01	85	5659	5338	5/19/16	2/21/17	Scaffold	SC	SAMEA2273652	GCA_900086205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/205/GCA_900086205.1_12082_4_87	-	k1092
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.87463	39	-	FPGD01	68	3716	3581	11/9/16	3/20/17	Scaffold	SC	SAMEA1466010	GCA_900117905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/905/GCA_900117905.1_7468_1_39	-	Ab39
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39048	66.4	-	LEFG01	160	6141	5751	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566334	GCA_001037025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/025/GCA_001037025.1_ASM103702v1	-	Pae_CF67.06i
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07275	39.6	-	FIEH01	40	2276	2023	2/10/16	3/13/17	Contig	SC	SAMEA2162846	GCA_900048815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/815/GCA_900048815.1_10702_5_73	-	2690STDY5561740
Escherichia coli p0305293.6	1116094	PRJNA77423	77423	Proteobacteria	Gammaproteobacteria	4.97466	50.8	-	AQCB01	406	5423	4918	4/8/13	5/18/17	Contig	IGS	SAMN00829545	GCA_000359075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/075/GCA_000359075.1_ASM35907v1	-	p0305293.6
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39644	65.6	-	MMUB01	17	4299	4102	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918628	GCA_001846275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/275/GCA_001846275.1_ASM184627v1	-	97-R590
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA296856	296856	Proteobacteria	Gammaproteobacteria	5.19314	51.9	-	LKJD01	98	5420	5116	12/14/15	2/21/17	Contig	Texas Tech University	SAMN04110140	GCA_001466375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/375/GCA_001466375.1_ASM146637v1	-	2013LSAL04524
Staphylococcus aureus F63687	1417041	PRJNA226792	226792	Terrabacteria group	Firmicutes	2.94257	32.8	-	JEPX01	18	3132	2959	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398733	GCA_000578035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/035/GCA_000578035.1_Stap_aure_F63687_V1	-	F63687
Staphylococcus aureus F63787	1417042	PRJNA226793	226793	Terrabacteria group	Firmicutes	2.88904	32.8	-	JEPY01	37	3023	2872	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398734	GCA_000578055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/055/GCA_000578055.1_Stap_aure_F63787_V1	-	F63787
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.80304	52.2	-	JYPZ01	42	4859	4617	12/21/15	3/1/17	Contig	FDA	SAMN02911925	GCA_001473305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/305/GCA_001473305.1_Salmonella_enterica_CVM_43756_v1.0	-	CVM 43756
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40328	65.6	-	MMTY01	7	4279	4115	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918631	GCA_001846355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/355/GCA_001846355.1_ASM184635v1	-	97-10490
Escherichia coli p0305293.7	1116095	PRJNA77425	77425	Proteobacteria	Gammaproteobacteria	5.06564	50.4	-	AQCC01	194	5547	5026	4/8/13	2/25/17	Contig	IGS	SAMN00829546	GCA_000359095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/095/GCA_000359095.2_ASM35909v2	-	p0305293.7
Streptococcus pneumoniae	1313	PRJEB2098	203734	Terrabacteria group	Firmicutes	2.0956	39.6	-	FITY01	32	2341	2091	2/10/16	3/13/17	Contig	SC	SAMEA807340	GCA_900048855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/855/GCA_900048855.1_4948_3_2	-	B17099
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.37061	66.3	-	LEFK01	241	6186	5608	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566338	GCA_001037065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/065/GCA_001037065.1_ASM103706v1	-	Pae_CF67.06n
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.91575	39	-	FPGF01	70	3789	3638	11/9/16	3/20/17	Scaffold	SC	SAMEA1466060	GCA_900117915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/915/GCA_900117915.1_7468_1_44	-	Ab44
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.5218	57.1	-	FLIS01	67	5545	5260	5/19/16	2/21/17	Scaffold	SC	SAMEA2273654	GCA_900086215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/215/GCA_900086215.1_12082_4_88	-	k1111
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.34588	57.3	-	FLIV01	60	5305	5069	5/19/16	2/21/17	Scaffold	SC	SAMEA2273662	GCA_900086225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/225/GCA_900086225.1_12082_4_89	-	k1234
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.90476	39	-	FPGB01	63	3772	3618	11/9/16	3/20/17	Scaffold	SC	SAMEA1466069	GCA_900117925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/925/GCA_900117925.1_7468_1_10	-	Ab10
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.37324	66.4	-	LEFN01	230	6169	5631	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566341	GCA_001037105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/105/GCA_001037105.1_ASM103710v1	-	Pae_CF67.06q
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07685	39.6	-	FIBP01	33	2276	2035	2/10/16	3/12/17	Contig	SC	SAMEA2147836	GCA_900049095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/095/GCA_900049095.1_10678_7_8	-	2690STDY5561684
Escherichia coli str. K-12 substr. MG1655	511145	PRJNA188384	188384	Proteobacteria	Gammaproteobacteria	4.65614	50.8	-	APIN01	2	4817	4485	4/11/13	5/18/17	Contig	Pacific Biosciences	SAMN02470785	GCA_000364365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/365/GCA_000364365.1_ASM36436v1	-	K-12 substr. MG1655
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39169	65.6	-	MMTW01	32	4270	4097	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918633	GCA_001846395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/395/GCA_001846395.1_ASM184639v1	-	99-R475
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.74657	52	-	JYPQ01	85	4849	4591	12/21/15	3/1/17	Contig	FDA	SAMN02911916	GCA_001473315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/315/GCA_001473315.1_Salmonella_enterica_CVM_43747_v1.0	-	CVM 43747
Staphylococcus aureus M28487	1417043	PRJNA226794	226794	Terrabacteria group	Firmicutes	2.9397	32.7	-	JEPZ01	30	3148	2972	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398735	GCA_000578075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/075/GCA_000578075.1_Stap_aure_M28487_V1	-	M28487
Staphylococcus aureus M29068	1417044	PRJNA226795	226795	Terrabacteria group	Firmicutes	2.92809	32.7	-	JEQA01	18	3094	2939	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398736	GCA_000578095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/095/GCA_000578095.1_Stap_aure_M29068_V1	-	M29068
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.11705	52.1	-	JYPO01	127	5322	5045	12/21/15	3/1/17	Contig	FDA	SAMN02911914	GCA_001473345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/345/GCA_001473345.1_Salmonella_enterica_CVM_43745_v1.0	-	CVM 43745
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41398	65.6	-	MMQB01	27	4293	4106	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918733	GCA_001846465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/465/GCA_001846465.1_ASM184646v1	-	03-R0551
Escherichia coli HM65	1308983	PRJNA194034	194034	Proteobacteria	Gammaproteobacteria	5.15684	50.5	-	APNX01	75	5373	5018	5/2/13	2/25/17	Contig	Institute for Genome Sciences	SAMN02436021	GCA_000387785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/785/GCA_000387785.2_ASM38778v2	23821517	HM65
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07708	39.6	-	FICC01	35	2284	2035	2/10/16	3/6/17	Contig	SC	SAMEA2158078	GCA_900049105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/105/GCA_900049105.1_10678_7_9	-	2690STDY5561717
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.38836	66.4	-	LEFO01	206	6166	5659	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566342	GCA_001037125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/125/GCA_001037125.1_ASM103712v1	-	Pae_CF67.06r
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.90566	39	-	FPGE01	65	3771	3622	11/9/16	3/20/17	Scaffold	SC	SAMEA1465999	GCA_900117935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/935/GCA_900117935.1_7468_1_9	-	Ab9
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.36351	57.3	-	FLIU01	50	5334	5095	5/19/16	2/21/17	Scaffold	SC	SAMEA2273668	GCA_900086235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/235/GCA_900086235.1_12082_4_90	-	k1238
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.6056	56.9	-	FLIW01	81	5671	5398	5/19/16	2/25/17	Scaffold	SC	SAMEA2273680	GCA_900086245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/245/GCA_900086245.1_12082_4_92	-	k1322
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	4.06688	39.1	-	FPGG01	97	3971	3809	11/9/16	3/20/17	Scaffold	SC	SAMEA1466079	GCA_900117945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/945/GCA_900117945.1_7468_2_77	-	Ab77
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.37534	66.4	-	LEFP01	266	6208	5609	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566343	GCA_001037145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/145/GCA_001037145.1_ASM103714v1	-	Pae_CF67.06s
Streptococcus pneumoniae	1313	PRJEB2110	203866	Terrabacteria group	Firmicutes	2.14103	39.3	-	FIVU01	67	2360	2111	2/10/16	3/13/17	Contig	SC	SAMEA971410	GCA_900049195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/195/GCA_900049195.1_4995_7_3	-	B14457
Escherichia coli HM26	1308540	PRJNA193699	193699	Proteobacteria	Gammaproteobacteria	5.26578	50.6	-	APNW01	95	5399	5039	5/2/13	2/25/17	Contig	Institute for Genome Sciences	SAMN02436018	GCA_000387805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/805/GCA_000387805.2_ASM38780v2	23821517	HM26
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35074	65.6	-	MMTT01	42	4257	4081	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918636	GCA_001846485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/485/GCA_001846485.1_ASM184648v1	-	99-02031
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.74131	52.2	-	JYPW01	53	4851	4597	12/21/15	3/1/17	Contig	FDA	SAMN02911922	GCA_001473355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/355/GCA_001473355.1_Salmonella_enterica_CVM_43753_v1.0	-	CVM 43753
Staphylococcus aureus M28485	1417045	PRJNA226796	226796	Terrabacteria group	Firmicutes	2.77768	32.8	-	JEQB01	37	2911	2742	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398737	GCA_000578115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/115/GCA_000578115.1_Stap_aure_M28485_V1	-	M28485
Staphylococcus aureus T74091	1417049	PRJNA226800	226800	Terrabacteria group	Firmicutes	2.83822	32.7	-	JEQC01	46	2965	2833	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398741	GCA_000578135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/135/GCA_000578135.1_Stap_aure_T74091_V1	-	T74091
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.97185	52.2	-	JYQA01	94	5117	4873	12/21/15	3/1/17	Contig	FDA	SAMN02911926	GCA_001473385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/385/GCA_001473385.1_Salmonella_enterica_CVM_43757_v1.0	-	CVM 43757
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39619	65.6	-	MMTS01	36	4294	4136	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918637	GCA_001846495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/495/GCA_001846495.1_ASM184649v1	-	98-R355
Escherichia coli HM27	1308981	PRJNA194032	194032	Proteobacteria	Gammaproteobacteria	5.16134	50.5	-	APNU01	284	5376	4984	5/2/13	2/25/17	Contig	Institute for Genome Sciences	SAMN02436019	GCA_000387825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/825/GCA_000387825.2_ASM38782v2	23821517	HM27
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07796	39.6	-	FHYF01	33	2273	2033	2/10/16	3/6/17	Contig	SC	SAMEA2161407	GCA_900049575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/575/GCA_900049575.1_10678_6_65	-	2690STDY5561851
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40005	66.4	-	LEFR01	268	6114	5876	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566345	GCA_001037165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/165/GCA_001037165.1_ASM103716v1	-	Pae_CF67.07a
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.91479	39	-	FPFP01	69	3786	3638	11/9/16	3/20/17	Scaffold	SC	SAMEA1466064	GCA_900117955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/955/GCA_900117955.1_7468_2_73	-	Ab73
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.77306	56.9	-	FLIX01	100	5809	5511	5/19/16	2/25/17	Scaffold	SC	SAMEA2273679	GCA_900086255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/255/GCA_900086255.1_12082_4_91	-	k1319
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.53164	57.2	-	FLIY01	58	5496	5216	5/19/16	2/21/17	Scaffold	SC	SAMEA2273688	GCA_900086265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/265/GCA_900086265.1_12082_4_93	-	k1402
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	4.07763	39	-	FPGI01	89	3983	3823	11/9/16	3/20/17	Scaffold	SC	SAMEA1466038	GCA_900117965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/965/GCA_900117965.1_7468_2_80	-	Ab80
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39798	66.4	-	LEFT01	194	6110	5905	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566347	GCA_001037185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/185/GCA_001037185.1_ASM103718v1	-	Pae_CF67.07c
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.0776	39.6	-	FHYH01	32	2287	2036	2/10/16	3/13/17	Contig	SC	SAMEA2160040	GCA_900049585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/585/GCA_900049585.1_10678_6_7	-	2690STDY5561678
Escherichia coli HM46	1308982	PRJNA194033	194033	Proteobacteria	Gammaproteobacteria	4.96183	50.8	-	APNY01	42	5063	4783	5/2/13	2/25/17	Contig	Institute for Genome Sciences	SAMN02436022	GCA_000387845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/845/GCA_000387845.2_ASM38784v2	23821517	HM46
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38741	65.6	-	MMTP01	17	4266	4095	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918640	GCA_001846545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/545/GCA_001846545.1_ASM184654v1	-	02-R0744
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.98687	52.1	-	JYQC01	84	5152	4896	12/21/15	3/1/17	Contig	FDA	SAMN02911928	GCA_001473405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/405/GCA_001473405.1_Salmonella_enterica_CVM_43759_v1.0	-	CVM 43759
Staphylococcus aureus W56912	1417052	PRJNA226803	226803	Terrabacteria group	Firmicutes	2.92031	32.7	-	JEQD01	56	3061	2911	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398744	GCA_000578155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/155/GCA_000578155.1_Stap_aure_W56912_V1	-	W56912
Staphylococcus aureus H32135	1417054	PRJNA226805	226805	Terrabacteria group	Firmicutes	2.82537	32.8	-	JEQE01	58	2972	2804	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398746	GCA_000578175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/175/GCA_000578175.1_Stap_aure_H32135_V1	-	H32135
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.97428	52.1	-	JYQI01	77	5075	4764	12/21/15	3/1/17	Contig	FDA	SAMN02911934	GCA_001473425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/425/GCA_001473425.1_Salmonella_enterica_CVM_43765_v1.0	-	CVM 43765
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34551	65.6	-	MMTQ01	31	4244	4070	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918639	GCA_001846555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/555/GCA_001846555.1_ASM184655v1	-	02-R1664
Escherichia coli HM69	1308984	PRJNA194035	194035	Proteobacteria	Gammaproteobacteria	5.36784	50.7	-	APNV01	124	5644	5299	5/2/13	2/25/17	Contig	Institute for Genome Sciences	SAMN02436020	GCA_000387865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/387/865/GCA_000387865.2_ASM38786v2	23821517	HM69
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.0761	39.6	-	FHZE01	32	2281	2030	2/10/16	3/13/17	Contig	SC	SAMEA2158198	GCA_900049595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/595/GCA_900049595.1_10678_7_20	-	2690STDY5561718
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40428	66.4	-	LEFX01	159	6105	5924	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566351	GCA_001037195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/195/GCA_001037195.1_ASM103719v1	-	Pae_CF67.07g
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.97729	39.1	-	FPGH01	86	3849	3695	11/9/16	3/20/17	Scaffold	SC	SAMEA1466026	GCA_900117975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/975/GCA_900117975.1_7468_2_85	-	Ab85
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.60308	57.1	-	FLIZ01	43	5688	5423	5/19/16	2/21/17	Scaffold	SC	SAMEA2273692	GCA_900086275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/275/GCA_900086275.1_12082_4_94	-	k1428
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.48964	57.3	-	FLJB01	59	5560	5313	5/19/16	2/21/17	Scaffold	SC	SAMEA2273695	GCA_900086285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/285/GCA_900086285.1_12082_4_96	-	k1449
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.94215	38.9	-	FPGJ01	69	3808	3655	11/9/16	3/20/17	Scaffold	SC	SAMEA1466061	GCA_900117985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/985/GCA_900117985.1_7468_2_90	-	Ab90
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.4114	66.4	-	LEGA01	119	6118	5935	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566354	GCA_001037235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/235/GCA_001037235.1_ASM103723v1	-	Pae_CF67.07j
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07611	39.6	-	FHZU01	45	2274	2034	2/10/16	3/15/17	Contig	SC	SAMEA2151360	GCA_900049605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/605/GCA_900049605.1_10678_7_33	-	2690STDY5561752
Escherichia coli O157 str. NCCP15739	1317130	PRJNA179183	179183	Proteobacteria	Gammaproteobacteria	5.31032	50.3	-	ASHA01	479	5644	5285	5/14/13	2/22/17	Contig	"Korea National Institute of Health, Korea Centers for Disease Control & Prevention"	SAMN02470149	GCA_000392555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/555/GCA_000392555.1_TG1203D3337	-	NCCP15739
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39158	65.6	-	MMTN01	53	4298	4114	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918642	GCA_001846595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/595/GCA_001846595.1_ASM184659v1	-	02-R1675
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.78396	52.2	-	JYQF01	112	4872	4654	12/21/15	3/1/17	Contig	FDA	SAMN02911931	GCA_001473435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/435/GCA_001473435.1_Salmonella_enterica_CVM_43762_v1.0	-	CVM 43762
Staphylococcus aureus H32166	1417055	PRJNA226806	226806	Terrabacteria group	Firmicutes	2.89652	32.7	-	JEQF01	12	3055	2894	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398747	GCA_000578195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/195/GCA_000578195.1_Stap_aure_H32166_V1	-	H32166
Staphylococcus aureus H32181	1417057	PRJNA226808	226808	Terrabacteria group	Firmicutes	2.8961	32.7	-	JEQG01	15	3056	2892	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398749	GCA_000578215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/215/GCA_000578215.1_Stap_aure_H32181_V1	-	H32181
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.97301	52.1	-	JYQP01	119	5150	4898	12/21/15	3/1/17	Contig	FDA	SAMN02911941	GCA_001473465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/465/GCA_001473465.1_Salmonella_enterica_CVM_43772_v1.0	-	CVM 43772
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40759	65.6	-	MMTK01	28	4303	4135	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918645	GCA_001846685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/685/GCA_001846685.1_ASM184668v1	-	03-R0065
Escherichia coli O157 str. NCCP15738	1317131	PRJNA179342	179342	Proteobacteria	Gammaproteobacteria	4.9597	50.6	-	ASHB01	415	5074	4799	5/14/13	2/22/17	Contig	"Korea National Institute of Health, Korea Centers for Disease Control & Prevention"	SAMN02470150	GCA_000392575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/392/575/GCA_000392575.1_TG1203D3338	27096008	NCCP15738
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07433	39.6	-	FIBM01	31	2270	2030	2/10/16	3/13/17	Contig	SC	SAMEA2147447	GCA_900049615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/615/GCA_900049615.1_10678_7_77	-	2690STDY5561831
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.39219	66.4	-	LEGB01	178	6100	5898	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566355	GCA_001037305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/305/GCA_001037305.1_ASM103730v1	-	Pae_CF67.07k
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.90255	39	-	FPGT01	94	3771	3630	11/9/16	3/20/17	Scaffold	SC	SAMEA1466042	GCA_900117995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/117/995/GCA_900117995.1_7468_2_87	-	Ab87
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.6227	57.1	-	FLJA01	64	5650	5363	5/19/16	2/21/17	Scaffold	SC	SAMEA2273693	GCA_900086295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/295/GCA_900086295.1_12082_4_95	-	k1436
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.70176	57.5	-	FLJC01	108	5727	5369	5/19/16	2/21/17	Scaffold	SC	SAMEA2273696	GCA_900086305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/305/GCA_900086305.1_12082_5_1	-	k1457
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.97755	39.1	-	FPGK01	82	3850	3696	11/9/16	3/20/17	Scaffold	SC	SAMEA1466017	GCA_900118005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/005/GCA_900118005.1_7468_2_86	-	Ab86
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40741	66.4	-	LEGC01	123	6125	5940	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566356	GCA_001037315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/315/GCA_001037315.1_ASM103731v1	-	Pae_CF67.07l
Streptococcus pneumoniae	1313	PRJEB2102	203746	Terrabacteria group	Firmicutes	2.0956	39.6	-	FIUJ01	30	2330	2092	2/10/16	3/13/17	Contig	SC	SAMEA685709	GCA_900049705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/705/GCA_900049705.1_4525_7_1	-	D31094
Escherichia coli TOP379	1286329	PRJNA187034	187034	Proteobacteria	Gammaproteobacteria	5.07639	50.4	-	AOQB01	144	5174	4485	5/16/13	8/8/17	Contig	"National University of Singapore, Genome Institute of Singapore"	SAMN01894008	GCA_000397225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/225/GCA_000397225.1_Ec13_E1U1_TOP379_120714	23658245	TOP379
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38565	65.6	-	MMTH01	23	4267	4094	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918648	GCA_001846705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/705/GCA_001846705.1_ASM184670v1	-	02-R1144
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.78218	52.2	-	JYQS01	56	4869	4626	12/21/15	3/1/17	Contig	FDA	SAMN02911944	GCA_001473485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/485/GCA_001473485.1_Salmonella_enterica_CVM_43775_v1.0	-	CVM 43775
Staphylococcus aureus F63786	1417058	PRJNA226809	226809	Terrabacteria group	Firmicutes	2.93276	32.7	-	JEQH01	10	3115	2954	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398750	GCA_000578235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/235/GCA_000578235.1_Stap_aure_F63786_V1	-	F63786
Staphylococcus aureus F66778	1417059	PRJNA226810	226810	Terrabacteria group	Firmicutes	2.89085	32.8	-	JEQI01	17	3045	2884	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398751	GCA_000578255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/255/GCA_000578255.1_Stap_aure_F66778_V1	-	F66778
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.87474	52.1	-	JYQV01	112	5062	4778	12/21/15	3/1/17	Contig	FDA	SAMN02911947	GCA_001473505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/505/GCA_001473505.1_Salmonella_enterica_CVM_43778_v1.0	-	CVM 43778
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40066	65.6	-	MMTI01	20	4285	4105	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918647	GCA_001846725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/725/GCA_001846725.1_ASM184672v1	-	03-R0060
Escherichia coli TOP382-1	1286330	PRJNA187034	187034	Proteobacteria	Gammaproteobacteria	4.94922	50.6	-	AOQC01	118	5042	4678	5/16/13	2/23/17	Contig	"National University of Singapore, Genome Institute of Singapore"	SAMN01894009	GCA_000397245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/245/GCA_000397245.1_Ec13_E1F1_TOP382-1_120714	23658245	TOP382-1
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07694	39.6	-	FIDR01	28	2283	2032	2/10/16	3/13/17	Contig	SC	SAMEA2145279	GCA_900049905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/905/GCA_900049905.1_10702_5_53	-	2690STDY5561696
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40761	66.4	-	LEGF01	136	6117	5922	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566359	GCA_001037345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/345/GCA_001037345.1_ASM103734v1	-	Pae_CF67.07o
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.9801	39.1	-	FPHA01	88	3852	3695	11/9/16	3/20/17	Scaffold	SC	SAMEA1317934	GCA_900118015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/015/GCA_900118015.1_7521_8_42	-	Ab114
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.68426	57.1	-	FLJE01	72	5734	5461	5/19/16	2/25/17	Scaffold	SC	SAMEA2273710	GCA_900086315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/315/GCA_900086315.1_12082_5_3	-	k1576
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.4538	57	-	FLJD01	121	5535	5194	5/19/16	2/21/17	Scaffold	SC	SAMEA2273708	GCA_900086325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/325/GCA_900086325.1_12082_5_2	-	k1566
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.97926	39.1	-	FPGW01	83	3851	3696	11/9/16	3/20/17	Scaffold	SC	SAMEA1317921	GCA_900118025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/025/GCA_900118025.1_7521_8_29	-	Ab101
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.40291	66.4	-	LEGJ01	150	6115	5917	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566363	GCA_001037385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/385/GCA_001037385.1_ASM103738v1	-	Pae_CF67.07s
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.0761	39.6	-	FIDT01	33	2285	2033	2/10/16	3/13/17	Contig	SC	SAMEA2162967	GCA_900049915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/915/GCA_900049915.1_10702_5_56	-	2690STDY5561804
Escherichia coli TOP382-2	1286331	PRJNA187034	187034	Proteobacteria	Gammaproteobacteria	5.09427	50.4	-	AOQD01	139	5214	4761	5/16/13	2/23/17	Contig	"National University of Singapore, Genome Institute of Singapore"	SAMN01894010	GCA_000397265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/265/GCA_000397265.1_Ec13_E1F2_TOP382-2_120714	23658245	TOP382-2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39107	65.6	-	MMTG01	17	4267	4098	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918649	GCA_001846745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/745/GCA_001846745.1_ASM184674v1	-	02-R1930
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.69643	52.1	-	JYQY01	65	4815	4559	12/21/15	3/1/17	Contig	FDA	SAMN02911950	GCA_001473525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/525/GCA_001473525.1_Salmonella_enterica_CVM_43781_v1.0	-	CVM 43781
Staphylococcus aureus M32679	1417063	PRJNA226814	226814	Terrabacteria group	Firmicutes	2.91435	32.8	-	JEQJ01	12	3087	2936	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398755	GCA_000578275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/275/GCA_000578275.1_Stap_aure_M32679_V1	-	M32679
Staphylococcus aureus T77565	1417065	PRJNA226816	226816	Terrabacteria group	Firmicutes	2.78063	32.8	-	JEQK01	42	2874	2740	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398757	GCA_000578295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/295/GCA_000578295.1_Stap_aure_T77565_V1	-	T77565
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.72434	52.1	-	JYRA01	49	4820	4580	12/21/15	3/1/17	Contig	FDA	SAMN02911952	GCA_001473545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/545/GCA_001473545.1_Salmonella_enterica_CVM_43783_v1.0	-	CVM 43783
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.4037	65.6	-	MMTE01	59	4312	4117	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918651	GCA_001846785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/785/GCA_001846785.1_ASM184678v1	-	02-R1851
Escherichia coli TOP382-3	1286332	PRJNA187034	187034	Proteobacteria	Gammaproteobacteria	5.0089	50.4	-	AOQE01	138	5110	4695	5/16/13	2/23/17	Contig	"National University of Singapore, Genome Institute of Singapore"	SAMN01894011	GCA_000397285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/285/GCA_000397285.1_Ec13_E1F3_TOP382-3_120714	23658245	TOP382-3
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.0765	39.6	-	FIDV01	35	2281	2029	2/10/16	3/13/17	Contig	SC	SAMEA2147374	GCA_900049925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/925/GCA_900049925.1_10702_5_57	-	2690STDY5561822
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.4032	66.4	-	LEGK01	140	6112	5928	6/22/15	3/17/17	Scaffold	University of Toronto	SAMN03566364	GCA_001037395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/395/GCA_001037395.1_ASM103739v1	-	Pae_CF67.07t
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.86611	39	-	FPGL01	84	3721	3585	11/9/16	3/20/17	Scaffold	SC	SAMEA1466054	GCA_900118035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/035/GCA_900118035.1_7468_2_89	-	Ab89
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.51136	57.2	-	FLJF01	70	5563	5250	5/19/16	2/21/17	Scaffold	SC	SAMEA2273716	GCA_900086335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/335/GCA_900086335.1_12082_5_4	-	k1604
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.36021	57.4	-	FLJG01	56	5384	5118	5/19/16	2/21/17	Scaffold	SC	SAMEA2273720	GCA_900086345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/345/GCA_900086345.1_12082_5_5	-	k1638
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	4.06194	38.9	-	FPGM01	64	3958	3809	11/9/16	3/20/17	Scaffold	SC	SAMEA1709808	GCA_900118045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/045/GCA_900118045.1_9119_6_37	-	ILBAbau5423446
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.4035	66.4	-	LFDI01	182	6122	5910	6/24/15	3/17/17	Scaffold	University of Toronto	SAMN03566315	GCA_001039325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/325/GCA_001039325.1_ASM103932v1	-	Pae_CF67.05j
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07596	39.6	-	FIDX01	31	2267	2031	2/10/16	3/13/17	Contig	SC	SAMEA2156514	GCA_900049935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/935/GCA_900049935.1_10702_5_61	-	2690STDY5561734
Escherichia coli TOP550-2	1286340	PRJNA187034	187034	Proteobacteria	Gammaproteobacteria	5.03469	50.4	-	AOQM01	131	5147	4708	5/16/13	2/23/17	Contig	"National University of Singapore, Genome Institute of Singapore"	SAMN01894019	GCA_000397445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/445/GCA_000397445.1_Ec13_E3F2_TOP550-2_120714	23658245	TOP550-2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37983	65.6	-	MMTD01	21	4263	4096	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918652	GCA_001846795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/795/GCA_001846795.1_ASM184679v1	-	03-R0280
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.74075	52.1	-	JYRB01	41	4864	4610	12/21/15	3/1/17	Contig	FDA	SAMN02911953	GCA_001473555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/555/GCA_001473555.1_Salmonella_enterica_CVM_43784_v1.0	-	CVM 43784
Staphylococcus aureus T77618	1417066	PRJNA226817	226817	Terrabacteria group	Firmicutes	2.89349	32.7	-	JEQL01	17	3045	2893	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398758	GCA_000578315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/315/GCA_000578315.1_Stap_aure_T77618_V1	-	T77618
Staphylococcus aureus F70077	1417069	PRJNA226820	226820	Terrabacteria group	Firmicutes	2.93128	32.8	-	JEQM01	57	3081	2921	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398761	GCA_000578335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/335/GCA_000578335.1_Stap_aure_F70077_V1	-	F70077
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.01574	52.1	-	JYRD01	94	5176	4924	12/21/15	3/1/17	Contig	FDA	SAMN02911955	GCA_001473585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/585/GCA_001473585.1_Salmonella_enterica_CVM_43786_v1.0	-	CVM 43786
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40614	65.6	-	MMTC01	44	4305	4108	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918653	GCA_001846815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/815/GCA_001846815.1_ASM184681v1	-	02-R1663
Escherichia coli TOP550-3	1286341	PRJNA187034	187034	Proteobacteria	Gammaproteobacteria	5.00922	50.4	-	AOQN01	119	5096	4675	5/16/13	2/23/17	Contig	"National University of Singapore, Genome Institute of Singapore"	SAMN01894020	GCA_000397465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/465/GCA_000397465.1_Ec13_E3F3_TOP550-3_120714	23658245	TOP550-3
Streptococcus pneumoniae	1313	PRJEB2098	203734	Terrabacteria group	Firmicutes	2.10182	39.6	-	FITT01	40	2349	2100	2/10/16	3/15/17	Contig	SC	SAMEA807294	GCA_900050075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/075/GCA_900050075.1_4948_1_1	-	A33056
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.94428	65.9	-	JWAL01	825	6916	6278	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197127	GCA_001060435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/435/GCA_001060435.1_ASM106043v1	26230489	1170_PAER
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.96927	38.8	-	FPGU01	90	3900	3731	11/9/16	3/20/17	Scaffold	SC	SAMEA1709753	GCA_900118055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/055/GCA_900118055.1_9119_6_86	-	ILBAbau5423495
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.60868	56.8	-	FLJH01	75	5667	5385	5/19/16	2/25/17	Scaffold	SC	SAMEA2273722	GCA_900086355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/355/GCA_900086355.1_12082_5_6	-	k1640
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.64297	56.9	-	FLJJ01	137	5791	5452	5/19/16	2/21/17	Scaffold	SC	SAMEA2273729	GCA_900086365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/365/GCA_900086365.1_12082_5_9	-	k1662
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	4.00157	39	-	FPGO01	66	3855	3696	11/9/16	3/20/17	Scaffold	SC	SAMEA1709836	GCA_900118065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/065/GCA_900118065.1_9119_6_40	-	ILBAbau5423449
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.7851	66.2	-	JVWG01	214	6536	6271	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197236	GCA_001060735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/735/GCA_001060735.1_ASM106073v1	26230489	1268_PAER
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.08282	39.7	-	FITS01	49	2322	2078	2/10/16	3/13/17	Contig	SC	SAMEA1033660	GCA_900050085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/085/GCA_900050085.1_6972_8_40	-	A32572
Escherichia coli TOP550-4	1286342	PRJNA187034	187034	Proteobacteria	Gammaproteobacteria	4.98263	50.6	-	AOQO01	120	5089	4702	5/16/13	2/23/17	Contig	"National University of Singapore, Genome Institute of Singapore"	SAMN01894021	GCA_000397485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/485/GCA_000397485.1_Ec13_E3F4_TOP550-4_120714	23658245	TOP550-4
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.4	65.6	-	MMSZ01	27	4296	4121	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918656	GCA_001846865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/865/GCA_001846865.1_ASM184686v1	-	02-R1896
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.8742	52.1	-	JYRE01	100	5016	4677	12/21/15	3/1/17	Contig	FDA	SAMN02911956	GCA_001473595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/595/GCA_001473595.1_Salmonella_enterica_CVM_43787_v1.0	-	CVM 43787
Staphylococcus aureus M35933	1417071	PRJNA226822	226822	Terrabacteria group	Firmicutes	2.85407	32.8	-	JEQN01	58	2982	2849	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398763	GCA_000578355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/355/GCA_000578355.1_Stap_aure_M35933_V1	-	M35933
Staphylococcus aureus M35938	1417072	PRJNA226823	226823	Terrabacteria group	Firmicutes	2.83425	32.8	-	JEQO01	39	2943	2811	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398764	GCA_000578375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/375/GCA_000578375.1_Stap_aure_M35938_V1	-	M35938
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.89573	52.1	-	JYRH01	88	5022	4782	12/21/15	3/1/17	Contig	FDA	SAMN02911959	GCA_001473625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/625/GCA_001473625.1_Salmonella_enterica_CVM_43790_v1.0	-	CVM 43790
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35402	65.6	-	MMTA01	15	4246	4080	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918655	GCA_001846895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/895/GCA_001846895.1_ASM184689v1	-	02-R1897
Escherichia coli TOP2386	1286343	PRJNA187034	187034	Proteobacteria	Gammaproteobacteria	4.44729	50.8	-	AOQP01	219	4516	4148	5/16/13	2/22/17	Contig	"National University of Singapore, Genome Institute of Singapore"	SAMN01894022	GCA_000397505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/505/GCA_000397505.1_Ec72_E1U1_TOP2386_120714	23658245	TOP2386
Streptococcus pneumoniae	1313	PRJEB2102	203746	Terrabacteria group	Firmicutes	2.1046	39.6	-	FIUQ01	44	2371	2088	2/10/16	3/13/17	Contig	SC	SAMEA685657	GCA_900050095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/095/GCA_900050095.1_4752_1_8	-	B13691
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.9587	65.9	-	JVUW01	149	6627	6388	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197272	GCA_001061475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/475/GCA_001061475.1_ASM106147v1	26230489	130_PAER
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	4.09206	39.1	-	FPGX01	113	4003	3838	11/9/16	3/20/17	Scaffold	SC	SAMEA1710000	GCA_900118075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/075/GCA_900118075.1_9119_6_60	-	ILBAbau5423469
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.47775	57.3	-	FLJI01	55	5576	5293	5/19/16	2/21/17	Scaffold	SC	SAMEA2273723	GCA_900086375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/375/GCA_900086375.1_12082_5_7	-	k1651
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.6398	57.4	-	FLJK01	50	5611	5302	5/19/16	2/21/17	Scaffold	SC	SAMEA2273730	GCA_900086385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/385/GCA_900086385.1_12082_5_10	-	k1670
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.9774	39.1	-	FPGN01	85	3851	3699	11/9/16	3/20/17	Scaffold	SC	SAMEA1466000	GCA_900118085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/085/GCA_900118085.1_7468_2_94	-	Ab94
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	7.36222	65.4	-	JVTQ01	1072	7553	6727	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197304	GCA_001061585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/585/GCA_001061585.1_ASM106158v1	26230489	1324_PAER
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07573	39.6	-	FHWJ01	28	2280	2031	2/10/16	3/12/17	Contig	SC	SAMEA2157196	GCA_900050355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/355/GCA_900050355.1_10678_6_15	-	2690STDY5561825
Escherichia coli TOP2396-1	1286344	PRJNA187034	187034	Proteobacteria	Gammaproteobacteria	4.44587	50.9	-	AOQQ01	223	4501	4194	5/16/13	2/22/17	Contig	"National University of Singapore, Genome Institute of Singapore"	SAMN01894023	GCA_000397525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/525/GCA_000397525.1_Ec72_E1F1_TOP2396-1_120714	23658245	TOP2396-1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39177	65.6	-	MMSX01	56	4291	4113	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918658	GCA_001846905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/905/GCA_001846905.1_ASM184690v1	-	02-R1956
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.96328	52.1	-	JYRK01	151	5153	4876	12/21/15	3/1/17	Contig	FDA	SAMN02911962	GCA_001473635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/635/GCA_001473635.1_Salmonella_enterica_CVM_43793_v1.0	-	CVM 43793
Staphylococcus aureus M35955	1417075	PRJNA226826	226826	Terrabacteria group	Firmicutes	2.90868	32.8	-	JEQP01	49	3036	2890	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398767	GCA_000578395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/395/GCA_000578395.1_Stap_aure_M35955_V1	-	M35955
Staphylococcus aureus M35965	1417076	PRJNA226827	226827	Terrabacteria group	Firmicutes	2.88429	32.7	-	JEQQ01	50	3020	2873	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398768	GCA_000578415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/415/GCA_000578415.1_Stap_aure_M35965_V1	-	M35965
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.06091	52	-	JYRQ01	118	5230	4959	12/21/15	3/1/17	Contig	FDA	SAMN02911968	GCA_001473665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/665/GCA_001473665.1_Salmonella_enterica_CVM_43799_v1.0	-	CVM 43799
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39101	65.6	-	MMSV01	22	4277	4098	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918660	GCA_001846945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/945/GCA_001846945.1_ASM184694v1	-	08-R1906
Escherichia coli TOP2396-2	1286345	PRJNA187034	187034	Proteobacteria	Gammaproteobacteria	4.73615	50.6	-	AOQR01	179	4885	4496	5/16/13	2/22/17	Contig	"National University of Singapore, Genome Institute of Singapore"	SAMN01894024	GCA_000397545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/545/GCA_000397545.1_Ec72_E1F2_TOP2396-2_120714	23658245	TOP2396-2
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07563	39.6	-	FHWP01	29	2282	2030	2/10/16	3/13/17	Contig	SC	SAMEA2154555	GCA_900050365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/365/GCA_900050365.1_10678_6_21	-	2690STDY5561849
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.51511	66.3	-	JWDL01	370	6239	5949	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197049	GCA_001061895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/895/GCA_001061895.1_ASM106189v1	26230489	1086_PAER
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	4.07981	39	-	FPGS01	108	3972	3826	11/9/16	3/20/17	Scaffold	SC	SAMEA1709824	GCA_900118095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/095/GCA_900118095.1_9119_6_53	-	ILBAbau5423462
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.42517	57.4	-	FLJL01	39	5383	5139	5/19/16	2/21/17	Scaffold	SC	SAMEA2273731	GCA_900086395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/395/GCA_900086395.1_12082_5_11	-	k1679
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.53179	57.3	-	FLJM01	60	5603	5331	5/19/16	2/21/17	Scaffold	SC	SAMEA2273732	GCA_900086405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/405/GCA_900086405.1_12082_5_12	-	k1704
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.97762	39.1	-	FPGQ01	88	3849	3695	11/9/16	3/20/17	Scaffold	SC	SAMEA1466018	GCA_900118105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/105/GCA_900118105.1_7468_2_96	-	Ab96
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.73789	66.2	-	JVWH01	387	6581	6194	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197235	GCA_001062565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/565/GCA_001062565.1_ASM106256v1	26230489	1267_PMEN
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07582	39.6	-	FIAF01	33	2284	2034	2/10/16	3/8/17	Contig	SC	SAMEA2154956	GCA_900050375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/375/GCA_900050375.1_10678_7_44	-	2690STDY5561750
Escherichia coli TOP2396-3	1286346	PRJNA187034	187034	Proteobacteria	Gammaproteobacteria	4.857	50.6	-	AOQS01	638	5164	4727	5/16/13	2/22/17	Contig	"National University of Singapore, Genome Institute of Singapore"	SAMN01894025	GCA_000397565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/565/GCA_000397565.1_Ec72_E1F3_TOP2396-3_120714	23658245	TOP2396-3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39104	65.6	-	MMSW01	17	4262	4095	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918659	GCA_001846965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/965/GCA_001846965.1_ASM184696v1	-	02-R1904
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.5955	52.1	-	JYRV01	42	4676	4417	12/21/15	3/1/17	Contig	FDA	SAMN02911973	GCA_001473685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/685/GCA_001473685.1_Salmonella_enterica_CVM_43804_v1.0	-	CVM 43804
Staphylococcus aureus W62972	1417078	PRJNA226829	226829	Terrabacteria group	Firmicutes	2.92974	32.7	-	JEQR01	15	3114	2946	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398770	GCA_000578435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/435/GCA_000578435.1_Stap_aure_W62972_V1	-	W62972
Staphylococcus aureus H38226	1417079	PRJNA226830	226830	Terrabacteria group	Firmicutes	2.87105	32.8	-	JEQS01	38	3018	2853	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398771	GCA_000578455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/455/GCA_000578455.1_Stap_aure_H38226_V1	-	H38226
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.92027	52.1	-	JYRY01	80	5067	4819	12/21/15	3/1/17	Contig	FDA	SAMN02911976	GCA_001473705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/705/GCA_001473705.1_Salmonella_enterica_CVM_43807_v1.0	-	CVM 43807
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40261	65.6	-	MMSS01	33	4291	4104	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918663	GCA_001847025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/025/GCA_001847025.1_ASM184702v1	-	03-R0303
Escherichia coli TOP2522-1	1286348	PRJNA187034	187034	Proteobacteria	Gammaproteobacteria	4.65762	50.8	-	AOQU01	412	4708	4472	5/16/13	2/22/17	Contig	"National University of Singapore, Genome Institute of Singapore"	SAMN01894027	GCA_000397605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/605/GCA_000397605.1_Ec72_E2F1_TOP2522-1_120714	23658245	TOP2522-1
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.16277	39.4	-	FIAH01	90	2361	2114	2/10/16	3/13/17	Contig	SC	SAMEA2145007	GCA_900050385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/385/GCA_900050385.1_10678_7_45	-	2690STDY5561762
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.20871	66.5	-	JVSG01	1755	6384	5290	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197340	GCA_001062835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/835/GCA_001062835.1_ASM106283v1	26230489	150_PMEN
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.98148	39.1	-	FPGP01	87	3857	3700	11/9/16	3/20/17	Scaffold	SC	SAMEA1317926	GCA_900118115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/115/GCA_900118115.1_7521_8_44	-	Ab116
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.42363	57.3	-	FLJN01	43	5452	5171	5/19/16	2/21/17	Scaffold	SC	SAMEA2273734	GCA_900086415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/415/GCA_900086415.1_12082_5_13	-	k1738
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.36217	57.4	-	FLJO01	43	5400	5136	5/19/16	2/21/17	Scaffold	SC	SAMEA2273738	GCA_900086425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/425/GCA_900086425.1_12082_5_14	-	k1761
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	4.17031	39	-	FPGZ01	110	4085	3925	11/9/16	3/20/17	Scaffold	SC	SAMEA1709760	GCA_900118125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/125/GCA_900118125.1_9119_6_49	-	ILBAbau5423458
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.9198	66	-	JVPD01	136	6653	6406	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197421	GCA_001062995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/995/GCA_001062995.1_ASM106299v1	26230489	230_PAER
Streptococcus pneumoniae	1313	PRJEB2102	203746	Terrabacteria group	Firmicutes	2.10025	39.6	-	FIUB01	61	2344	2086	2/10/16	3/13/17	Contig	SC	SAMEA685624	GCA_900050475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/475/GCA_900050475.1_4752_1_3	-	A31470
Escherichia coli TOP2652	1286350	PRJNA187034	187034	Proteobacteria	Gammaproteobacteria	4.87822	50.6	-	AOQV01	145	4994	4604	5/16/13	2/23/17	Contig	"National University of Singapore, Genome Institute of Singapore"	SAMN01894029	GCA_000397625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/625/GCA_000397625.1_Ec72_E3U1_TOP2652_120714	23658245	TOP2652
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39266	65.6	-	MMSQ01	25	4275	4103	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918665	GCA_001847065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/065/GCA_001847065.1_ASM184706v1	-	03-R0267
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.92167	52	-	JYSF01	103	5026	4780	12/21/15	3/1/17	Contig	FDA	SAMN02911983	GCA_001473725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/725/GCA_001473725.1_Salmonella_enterica_CVM_43814_v1.0	-	CVM 43814
Staphylococcus aureus H38239	1417080	PRJNA226831	226831	Terrabacteria group	Firmicutes	2.81437	32.8	-	JEQT01	33	2944	2782	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398772	GCA_000578475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/475/GCA_000578475.1_Stap_aure_H38239_V1	-	H38239
Staphylococcus aureus F73187	1417081	PRJNA226832	226832	Terrabacteria group	Firmicutes	2.85976	32.8	-	JEQU01	56	2995	2819	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398773	GCA_000578495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/495/GCA_000578495.1_Stap_aure_F73187_V1	-	F73187
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.79669	52.1	-	JYSH01	58	4894	4653	12/21/15	3/1/17	Contig	FDA	SAMN02911985	GCA_001473735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/735/GCA_001473735.1_Salmonella_enterica_CVM_43816_v1.0	-	CVM 43816
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40028	65.6	-	MMSL01	22	4279	4115	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918670	GCA_001847155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/155/GCA_001847155.1_ASM184715v1	-	02-R1449
Escherichia coli TOP2662-1	1286351	PRJNA187034	187034	Proteobacteria	Gammaproteobacteria	4.92588	50.6	-	AOQW01	147	5044	4659	5/16/13	2/23/17	Contig	"National University of Singapore, Genome Institute of Singapore"	SAMN01894030	GCA_000397645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/645/GCA_000397645.1_Ec72_E3F1_TOP2662-1_120714	23658245	TOP2662-1
Streptococcus pneumoniae	1313	PRJEB2102	203746	Terrabacteria group	Firmicutes	2.10342	39.6	-	FIUK01	38	2356	2091	2/10/16	3/8/17	Contig	SC	SAMEA685713	GCA_900050495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/495/GCA_900050495.1_4525_7_3	-	C12458
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.47189	66.4	-	JVPC01	110	6172	5971	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197422	GCA_001063005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/005/GCA_001063005.1_ASM106300v1	26230489	231_PPRO
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.917	39	-	FPGY01	72	3794	3643	11/9/16	3/20/17	Scaffold	SC	SAMEA1317936	GCA_900118135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/135/GCA_900118135.1_7521_8_41	-	Ab113
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.43419	57.3	-	FLJQ01	56	5422	5186	5/19/16	2/21/17	Scaffold	SC	SAMEA2273745	GCA_900086435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/435/GCA_900086435.1_12082_5_16	-	k1781
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.42014	57.3	-	FLJP01	47	5432	5182	5/19/16	2/21/17	Scaffold	SC	SAMEA2273739	GCA_900086445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/445/GCA_900086445.1_12082_5_15	-	k1765
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	3.95671	39.1	-	FPGV01	78	3828	3676	11/9/16	3/20/17	Scaffold	SC	SAMEA1317938	GCA_900118145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/145/GCA_900118145.1_7521_8_30	-	Ab102
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	7.20076	66	-	JVJX01	273	7014	6632	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197557	GCA_001063225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/225/GCA_001063225.1_ASM106322v1	26230489	367_PAER
Streptococcus pneumoniae	1313	PRJEB2098	203734	Terrabacteria group	Firmicutes	2.23889	39.5	-	FIYJ01	43	2502	2248	2/10/16	3/13/17	Contig	SC	SAMEA807338	GCA_900050535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/535/GCA_900050535.1_4948_1_3	-	A33096
Escherichia coli TOP2662-2	1286352	PRJNA187034	187034	Proteobacteria	Gammaproteobacteria	4.93215	50.6	-	AOQX01	152	5048	4632	5/16/13	2/23/17	Contig	"National University of Singapore, Genome Institute of Singapore"	SAMN01894031	GCA_000397665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/665/GCA_000397665.1_Ec72_E3F2_TOP2662-2_120714	23658245	TOP2662-2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39048	65.6	-	MMSK01	22	4283	4089	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918671	GCA_001847175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/175/GCA_001847175.1_ASM184717v1	-	03-R0276
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.70252	52.1	-	JYSK01	123	4848	4580	12/21/15	3/1/17	Contig	FDA	SAMN02911988	GCA_001473765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/765/GCA_001473765.1_Salmonella_enterica_CVM_43819_v1.0	-	CVM 43819
Staphylococcus aureus F73229	1417082	PRJNA226833	226833	Terrabacteria group	Firmicutes	2.8729	32.7	-	JEQV01	9	3027	2871	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398774	GCA_000578515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/515/GCA_000578515.1_Stap_aure_F73229_V1	-	F73229
Staphylococcus aureus H38215	1417085	PRJNA226836	226836	Terrabacteria group	Firmicutes	2.87293	32.8	-	JEQW01	54	3021	2864	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398777	GCA_000578535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/535/GCA_000578535.1_Stap_aure_H38215_V1	-	H38215
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.15276	52	-	JYSN01	112	5324	5065	12/21/15	3/1/17	Contig	FDA	SAMN02911991	GCA_001473785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/785/GCA_001473785.1_Salmonella_enterica_CVM_43822_v1.0	-	CVM 43822
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39462	65.6	-	MMSJ01	35	4277	4093	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918672	GCA_001847225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/225/GCA_001847225.1_ASM184722v1	-	02-R1493
Escherichia coli TOP2662-3	1286353	PRJNA187034	187034	Proteobacteria	Gammaproteobacteria	4.99364	50.6	-	AOQY01	135	5101	4695	5/16/13	2/23/17	Contig	"National University of Singapore, Genome Institute of Singapore"	SAMN01894032	GCA_000397685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/685/GCA_000397685.1_Ec72_E3F3_TOP2662-3_120714	23658245	TOP2662-3
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07832	39.6	-	FHYE01	27	2282	2029	2/10/16	3/15/17	Contig	SC	SAMEA2158965	GCA_900050755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/755/GCA_900050755.1_10678_6_64	-	2690STDY5561888
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.55187	66.2	-	JVBJ01	1029	6595	5835	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197779	GCA_001063795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/795/GCA_001063795.1_ASM106379v1	26230489	577_PAER
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	4.00191	39	-	FPGR01	66	3855	3694	11/9/16	3/20/17	Scaffold	SC	SAMEA1709750	GCA_900118155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/118/155/GCA_900118155.1_9119_6_48	-	ILBAbau5423457
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.62897	57.2	-	FLJU01	103	5696	5337	5/19/16	2/21/17	Scaffold	SC	SAMEA2273751	GCA_900086455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/455/GCA_900086455.1_12082_5_18	-	k1821
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.459	57.1	-	FLJS01	48	5487	5218	5/19/16	2/25/17	Scaffold	SC	SAMEA2273763	GCA_900086465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/465/GCA_900086465.1_12082_5_22	-	k1953
Acinetobacter baumannii	470	PRJEB15065	350436	Proteobacteria	Gammaproteobacteria	4.02215	39.1	-	FWFB01	250	3947	3724	3/29/17	5/31/17	Scaffold	Faculty of medecine and pharmacy RABAT	SAMEA103920782	GCA_900169915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/915/GCA_900169915.1_ASM90016991v1	-	-
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.73443	66.1	-	JUZD01	1750	6974	5870	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197837	GCA_001063865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/865/GCA_001063865.1_ASM106386v1	26230489	637_PAER
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07453	39.6	-	FIAC01	32	2280	2031	2/10/16	3/15/17	Contig	SC	SAMEA2153581	GCA_900050765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/765/GCA_900050765.1_10678_7_40	-	2690STDY5561834
Escherichia coli TOP2662-4	1286354	PRJNA187034	187034	Proteobacteria	Gammaproteobacteria	4.97721	50.6	-	AOQZ01	152	5083	4682	5/16/13	2/23/17	Contig	"National University of Singapore, Genome Institute of Singapore"	SAMN01894033	GCA_000397705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/705/GCA_000397705.1_Ec72_E3F4_TOP2662-4_120714	23658245	TOP2662-4
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38674	65.6	-	MMSH01	35	4282	4096	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918674	GCA_001847235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/235/GCA_001847235.1_ASM184723v1	-	04-R0266
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.93611	52.1	-	JYSO01	190	5101	4823	12/21/15	3/1/17	Contig	FDA	SAMN02911992	GCA_001473795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/795/GCA_001473795.1_Salmonella_enterica_CVM_43823_v1.0	-	CVM 43823
Staphylococcus aureus M39265	1417086	PRJNA226837	226837	Terrabacteria group	Firmicutes	2.87471	32.8	-	JEQX01	31	3008	2872	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398778	GCA_000578555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/555/GCA_000578555.1_Stap_aure_M39265_V1	-	M39265
Staphylococcus aureus T83705	1417087	PRJNA226838	226838	Terrabacteria group	Firmicutes	2.80911	32.8	-	JEQY01	34	2908	2764	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398779	GCA_000578575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/575/GCA_000578575.1_Stap_aure_T83705_V1	-	T83705
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.90848	52.2	-	JYSR01	119	5002	4704	12/21/15	3/1/17	Contig	FDA	SAMN02911995	GCA_001473815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/815/GCA_001473815.1_Salmonella_enterica_CVM_43826_v1.0	-	CVM 43826
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39916	65.6	-	MMSG01	25	4288	4106	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918675	GCA_001847245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/245/GCA_001847245.1_ASM184724v1	-	03-R0219
Escherichia coli TOP2386	1286343	PRJNA187034	187034	Proteobacteria	Gammaproteobacteria	4.63765	50.8	-	AORB01	195	4744	4400	5/16/13	2/22/17	Contig	"National University of Singapore, Genome Institute of Singapore"	SAMN01894022	GCA_000397725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/725/GCA_000397725.1_Ec72_E1U1_TOP2386_MIRA_120724	23658245	TOP2386
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07563	39.6	-	FIBR01	36	2279	2031	2/10/16	3/6/17	Contig	SC	SAMEA2157277	GCA_900050775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/775/GCA_900050775.1_10678_7_81	-	2690STDY5561796
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.84293	66.1	-	JVNE01	422	6726	6351	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197472	GCA_001064305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/305/GCA_001064305.1_ASM106430v1	26230489	279_PAER
Acinetobacter baumannii	470	PRJEB15065	350436	Proteobacteria	Gammaproteobacteria	3.93593	39.1	-	FWWQ01	175	3868	3672	4/6/17	4/17/17	Scaffold	Faculty of medecine and pharmacy RABAT	SAMEA103955436	GCA_900175195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/175/195/GCA_900175195.1_AC13M	-	AC13_M
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.20262	57.4	-	FLJT01	67	5126	4900	5/19/16	2/21/17	Scaffold	SC	SAMEA2273746	GCA_900086475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/475/GCA_900086475.1_12082_5_17	-	k1786
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.34774	57.4	-	FLJR01	40	5300	5075	5/19/16	2/25/17	Scaffold	SC	SAMEA2273773	GCA_900086485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/485/GCA_900086485.1_12082_5_23	-	k2135
Candidatus Portiera aleyrodidarum	91844	PRJEB4468	277155	Proteobacteria	Gammaproteobacteria	0.290376	23.8	chromosome I:LN734649.1	-	1	317	278	3/4/15	3/4/15	Complete Genome	ICBIBE	SAMEA2820671	GCA_000953415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/415/GCA_000953415.1_AF-CAI.1	-	AF-CAI
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.80159	66.1	-	JVHM01	75	6517	6317	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197620	GCA_001064905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/905/GCA_001064905.1_ASM106490v1	26230489	427_PAER
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.04427	39.6	-	FIWJ01	54	2226	1993	2/10/16	3/13/17	Contig	SC	SAMEA1033586	GCA_900050955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/955/GCA_900050955.1_7004_3_56	-	C14971
Escherichia coli TOP2652	1286350	PRJNA187034	187034	Proteobacteria	Gammaproteobacteria	5.19689	50.4	-	AORA01	306	5399	5003	5/16/13	2/23/17	Contig	"National University of Singapore, Genome Institute of Singapore"	SAMN01894029	GCA_000397745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/745/GCA_000397745.1_Ec72_E3U1_TOP2652_MIRA_120724	23658245	TOP2652
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.33871	65.6	-	MMSF01	15	4235	4072	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918676	GCA_001847285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/285/GCA_001847285.1_ASM184728v1	-	03-R0289
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.01642	51.9	-	JYST01	183	5136	4849	12/21/15	3/1/17	Contig	FDA	SAMN02911997	GCA_001473845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/845/GCA_001473845.1_Salmonella_enterica_CVM_43828_v1.0	-	CVM 43828
Staphylococcus aureus W65910	1417089	PRJNA226840	226840	Terrabacteria group	Firmicutes	2.9042	32.7	-	JEQZ01	20	3073	2914	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398781	GCA_000578595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/595/GCA_000578595.1_Stap_aure_W65910_V1	-	W65910
Staphylococcus aureus W65904	1417091	PRJNA226842	226842	Terrabacteria group	Firmicutes	2.93126	32.7	-	JERA01	20	3111	2956	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398783	GCA_000578615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/615/GCA_000578615.1_Stap_aure_W65904_V1	-	W65904
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.07126	52.1	-	JYSX01	74	5273	5024	12/21/15	3/1/17	Contig	FDA	SAMN02912001	GCA_001473865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/865/GCA_001473865.1_Salmonella_enterica_CVM_43832_v1.0	-	CVM 43832
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39077	65.6	-	MMSE01	34	4278	4099	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918677	GCA_001847315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/315/GCA_001847315.1_ASM184731v1	-	02-R1595
Escherichia coli P0304777.2	1116164	PRJNA77565	77565	Proteobacteria	Gammaproteobacteria	5.08674	50.6	-	AQAM01	214	5449	4971	4/8/13	2/25/17	Contig	IGS	SAMN00829493	GCA_000400895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/400/895/GCA_000400895.2_ASM40089v2	-	P0304777.2
Streptococcus pneumoniae	1313	PRJEB2110	203866	Terrabacteria group	Firmicutes	2.11625	39.5	-	FIXW01	56	2329	2085	2/10/16	3/13/17	Contig	SC	SAMEA971457	GCA_900050965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/965/GCA_900050965.1_4995_7_9	-	C11950
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.89889	66.1	-	JVGC01	140	6631	6348	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197656	GCA_001065035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/035/GCA_001065035.1_ASM106503v1	26230489	462_PAER
Mycoplasma leachii PG50	880447	PRJNA27715	27715	Terrabacteria group	Tenericutes	1.00895	23.8	chromosome:NC_014751.1/CP002108.1	-	1	903	820	11/30/10	4/7/17	Complete Genome	JCVI	SAMN02603458	GCA_000183365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/183/365/GCA_000183365.1_ASM18336v1	22843585	PG50
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	4.99643	57.8	-	FLJV01	15	4919	4740	5/19/16	2/25/17	Scaffold	SC	SAMEA2273774	GCA_900086495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/495/GCA_900086495.1_12082_5_24	-	k1982
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.58615	57	-	FLJX01	47	5621	5365	5/19/16	2/21/17	Scaffold	SC	SAMEA2273782	GCA_900086505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/505/GCA_900086505.1_12082_5_26	-	k1070
Mycoplasma capricolum subsp. capricolum ATCC 27343	340047	PRJNA16208	16208	Terrabacteria group	Tenericutes	1.01002	23.8	chromosome:NC_007633.1/CP000123.1	-	1	877	797	12/6/05	3/29/17	Complete Genome	J. Craig Venter Institute	SAMN02603434	GCA_000012765.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/012/765/GCA_000012765.1_ASM1276v1	-	ATCC 27343
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.80397	66.2	-	JVFW01	278	6568	6297	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197662	GCA_001065075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/075/GCA_001065075.1_ASM106507v1	26230489	468_PAER
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09018	39.6	-	FHTT01	44	2305	2060	2/10/16	3/13/17	Contig	SC	SAMEA2521690	GCA_900051205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/205/GCA_900051205.1_13414_3_44	-	2245STDY5819657
Escherichia coli ATCC 25922	1322345	PRJNA197239	197239	Proteobacteria	Gammaproteobacteria	5.11328	50.4	-	ASHD01	116	5281	4974	5/28/13	2/23/17	Contig	Technical University of Denmark	SAMN02471031	GCA_000401755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/755/GCA_000401755.1_Escherichia_coli_ATCC_25922	24040003	ATCC 25922
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39981	65.6	-	MMSC01	50	4314	4117	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918679	GCA_001847335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/335/GCA_001847335.1_ASM184733v1	-	02-15749
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.05657	52	-	JYTB01	135	5249	4969	12/21/15	3/1/17	Contig	FDA	SAMN02912005	GCA_001473885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/885/GCA_001473885.1_Salmonella_enterica_CVM_43836_v1.0	-	CVM 43836
Staphylococcus aureus H41079	1417093	PRJNA226844	226844	Terrabacteria group	Firmicutes	2.93641	32.7	-	JERB01	23	3118	2947	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398785	GCA_000578635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/635/GCA_000578635.1_Stap_aure_H41079_V1	-	H41079
Staphylococcus aureus F76218	1417095	PRJNA226846	226846	Terrabacteria group	Firmicutes	2.77116	32.8	-	JERC01	33	2849	2728	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398787	GCA_000578655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/655/GCA_000578655.1_Stap_aure_F76218_V1	-	F76218
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.80927	52.1	-	JYTC01	122	4968	4680	12/21/15	3/1/17	Contig	FDA	SAMN02912006	GCA_001473905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/905/GCA_001473905.1_Salmonella_enterica_CVM_43837_v1.0	-	CVM 43837
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38797	65.6	-	MMRZ01	60	4291	4106	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918682	GCA_001847405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/405/GCA_001847405.1_ASM184740v1	-	03-R0465
Escherichia coli O91	1055539	PRJNA191042	191042	Proteobacteria	Gammaproteobacteria	5.06932	50.6	-	AOUQ01	439	5284	4961	5/31/13	2/22/17	Contig	"Korea National Institute of Health, Korea Centers for Disease Control & Prevention"	SAMN02470152	GCA_000403965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/965/GCA_000403965.1_ASM40396v1	-	O91
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.0764	39.6	-	FIDS01	31	2270	2027	2/10/16	3/13/17	Contig	SC	SAMEA2144368	GCA_900051235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/235/GCA_900051235.1_10702_5_54	-	2690STDY5561713
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.56629	66	-	JVCT01	127	6324	6044	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197743	GCA_001065395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/395/GCA_001065395.1_ASM106539v1	26230489	545_PAER
Mycoplasma capricolum subsp. capripneumoniae	40480	PRJNA358856	358856	Terrabacteria group	Tenericutes	1.01666	23.7	chromosome:NZ_CP019061.1/CP019061.1	-	1	916	578	3/2/17	4/10/17	Complete Genome	"Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences"	SAMN06186601	GCA_002009215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/215/GCA_002009215.1_ASM200921v1	-	zly1309F
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.55517	56.9	-	FLJW01	38	5605	5333	5/19/16	2/21/17	Scaffold	SC	SAMEA2273780	GCA_900086515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/515/GCA_900086515.1_12082_5_25	-	k2040
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.3937	57.3	-	FLJY01	66	5373	5066	5/19/16	2/25/17	Scaffold	SC	SAMEA2273788	GCA_900086525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/525/GCA_900086525.1_12082_5_27	-	k1166
Acinetobacter baumannii SDF	509170	PRJNA13001	13001	Proteobacteria	Gammaproteobacteria	3.478	39.1264	chromosome:CU468230.2; plasmid p1ABSDF:CU468231.1; plasmid p2ABSDF:CU468232.1; plasmid p3ABSDF:CU468233.1	-	4	3664	2975	2/26/08	2/27/15	Chromosome	Genoscope	SAMEA3138277	GCA_000069205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/069/205/GCA_000069205.1_ASM6920v1	-	SDF
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.97952	66.5	-	JVBK01	414	5843	5440	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197778	GCA_001065515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/515/GCA_001065515.1_ASM106551v1	26230489	576_PAER
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07684	39.6	-	FIDW01	37	2284	2027	2/10/16	3/13/17	Contig	SC	SAMEA2156331	GCA_900051245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/245/GCA_900051245.1_10702_5_59	-	2690STDY5561716
Escherichia coli O91	1055539	PRJNA191041	191041	Proteobacteria	Gammaproteobacteria	4.97944	50.6	-	AOUP01	900	5308	4875	5/31/13	2/22/17	Contig	"Korea National Institute of Health, Korea Centers for Disease Control & Prevention"	SAMN02470151	GCA_000403985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/985/GCA_000403985.1_ASM40398v1	-	O91
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40082	65.6	-	MMRX01	55	4307	4114	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918684	GCA_001847465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/465/GCA_001847465.1_ASM184746v1	-	03-R0400
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.98629	52	-	JYTE01	103	5095	4848	12/21/15	3/1/17	Contig	FDA	SAMN02912008	GCA_001473915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/915/GCA_001473915.1_Salmonella_enterica_CVM_43839_v1.0	-	CVM 43839
Staphylococcus aureus W65885	1417097	PRJNA226848	226848	Terrabacteria group	Firmicutes	2.87672	32.7	-	JERD01	37	3023	2849	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398789	GCA_000578675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/675/GCA_000578675.1_Stap_aure_W65885_V1	-	W65885
Staphylococcus aureus M42507	1417098	PRJNA226849	226849	Terrabacteria group	Firmicutes	2.88854	32.7	-	JERE01	43	3021	2857	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398790	GCA_000578695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/695/GCA_000578695.1_Stap_aure_M42507_V1	-	M42507
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.08402	52	-	JYTI01	131	5271	5013	12/21/15	3/1/17	Contig	FDA	SAMN02912012	GCA_001473945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/945/GCA_001473945.1_Salmonella_enterica_CVM_43843_v1.0	-	CVM 43843
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37713	65.6	-	MMRV01	28	4273	4094	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918686	GCA_001847485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/485/GCA_001847485.1_ASM184748v1	-	03-R0840
Escherichia coli C639_08	1126911	PRJNA79281	79281	Proteobacteria	Gammaproteobacteria	4.91352	50.5	-	AIBH01	148	5152	4822	6/11/13	2/25/17	Contig	IGS	SAMN02435964	GCA_000410655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/655/GCA_000410655.2_ASM41065v2	23868135	C639_08
Streptococcus pneumoniae	1313	PRJEB2102	203746	Terrabacteria group	Firmicutes	2.09539	39.6	-	FIUG01	43	2326	2082	2/10/16	3/13/17	Contig	SC	SAMEA685742	GCA_900051295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/295/GCA_900051295.1_4525_8_4	-	C13632
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.77031	66.1	-	JUZF01	1160	6939	6037	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197835	GCA_001065755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/755/GCA_001065755.1_ASM106575v1	26230489	635_PAER
Acinetobacter baumannii AC12	1198108	PRJNA168112	168112	Proteobacteria	Gammaproteobacteria	3.85523	38.9896	chromosome:CP007549.3; plasmid pAC12:CP007550.1	-	2	3611	3553	4/18/14	12/16/16	Chromosome	Universiti Sultan Zainal Abidin	SAMN02471420	GCA_000282795.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/282/795/GCA_000282795.3_ASM28279v3	-	AC12
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.45237	57.2	-	FLKA01	30	5463	5223	5/19/16	2/21/17	Scaffold	SC	SAMEA2273872	GCA_900086535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/535/GCA_900086535.1_12216_4_87	-	k1435
Klebsiella pneumoniae	573	PRJEB5065	244030	Proteobacteria	Gammaproteobacteria	5.29407	57.4	-	FLJZ01	47	5317	5109	5/19/16	2/21/17	Scaffold	SC	SAMEA2273789	GCA_900086545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/086/545/GCA_900086545.1_12082_5_28	-	k1206
Acinetobacter baumannii PR07	1279013	PRJNA185400	185400	Proteobacteria	Gammaproteobacteria	3.93717	39.5	chromosome:CP012035.1	-	1	3517	3377	7/15/16	7/15/16	Chromosome	Universiti Teknologi MARA	SAMN02471432	GCA_000372585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/585/GCA_000372585.2_ASM37258v2	-	PR07
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.78953	66.2	-	JUQN01	562	6683	6284	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03198061	GCA_001066615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/615/GCA_001066615.1_ASM106661v1	26230489	852_PAER
Streptococcus pneumoniae	1313	PRJEB2098	203734	Terrabacteria group	Firmicutes	2.10344	39.7	-	FIXX01	34	2311	2077	2/10/16	3/6/17	Contig	SC	SAMEA807275	GCA_900051335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/335/GCA_900051335.1_4948_3_7	-	B15467
Escherichia coli C844_97	1126932	PRJNA79323	79323	Proteobacteria	Gammaproteobacteria	4.66411	50.6	-	AIBZ01	116	4819	4552	6/11/13	2/25/17	Contig	IGS	SAMN02435913	GCA_000410675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/410/675/GCA_000410675.2_ASM41067v2	23868135	C844_97
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37292	65.5	-	MMRU01	26	4274	4098	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918687	GCA_001847495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/495/GCA_001847495.1_ASM184749v1	-	03-R0326
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.00964	52.2	-	JYPM01	99	5179	4929	12/21/15	3/1/17	Contig	FDA	SAMN02911912	GCA_001473965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/965/GCA_001473965.1_Salmonella_enterica_CVM_43743_v1.0	-	CVM 43743
Staphylococcus aureus T86574	1417099	PRJNA226850	226850	Terrabacteria group	Firmicutes	2.77027	32.7	-	JERF01	42	2881	2705	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398791	GCA_000578715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/715/GCA_000578715.1_Stap_aure_T86574_V1	-	T86574
Staphylococcus aureus M42485	1417100	PRJNA226851	226851	Terrabacteria group	Firmicutes	2.87588	32.8	-	JERG01	51	3011	2862	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398792	GCA_000578735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/735/GCA_000578735.1_Stap_aure_M42485_V1	-	M42485
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.74008	52.1	-	JYPN01	100	4868	4602	12/21/15	3/1/17	Contig	FDA	SAMN02911913	GCA_001473985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/473/985/GCA_001473985.1_Salmonella_enterica_CVM_43744_v1.0	-	CVM 43744
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40318	65.6	-	MMRS01	15	4283	4115	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918689	GCA_001847505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/505/GCA_001847505.1_ASM184750v1	-	03-R0744
Escherichia coli IMT8073	1337997	PRJNA205419	205419	Proteobacteria	Gammaproteobacteria	5.1444	50.5	-	ASXQ01	179	5479	5094	6/24/13	2/25/17	Contig	"Institute of Microbiology and Epizootics, Veterinary Faculty, Freie University Berlin"	SAMN02470016	GCA_000414155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/155/GCA_000414155.2_IMT8073_mix_1	23908298	IMT8073
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07509	39.6	-	FHYN01	30	2285	2035	2/10/16	3/6/17	Contig	SC	SAMEA2156940	GCA_900051485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/485/GCA_900051485.1_10678_6_75	-	2690STDY5561906
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	7.11055	65.8	-	JWBE01	252	6904	6561	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197108	GCA_001069315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/069/315/GCA_001069315.1_ASM106931v1	26230489	1152_PAER
Acinetobacter baumannii	470	PRJNA308422	308422	Proteobacteria	Gammaproteobacteria	3.97675	41	chromosome:CP014266.1	-	1	3137	2764	4/22/16	6/15/17	Chromosome	CHU A Coruna	SAMN04448102	GCA_001628795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/628/795/GCA_001628795.1_ASM162879v1	-	Ab421_GEIH-2010
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.58257	57.2	-	FLVG01	44	5627	5333	7/14/16	2/21/17	Scaffold	SC	SAMEA3531822	GCA_900092675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/675/GCA_900092675.1_18090_8_51	-	PB256
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.84524	56.9	-	FLVC01	107	5962	5673	7/14/16	2/21/17	Scaffold	SC	SAMEA3531846	GCA_900092685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/685/GCA_900092685.1_18090_6_74	-	PB450
Acinetobacter baumannii A118	927193	PRJNA60111	60111	Proteobacteria	Gammaproteobacteria	3.8003	38.6	-	AEOW01	227	-	-	1/24/11	1/8/14	Scaffold	Case Western Reserve University	SAMN02469413	GCA_000186565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/186/565/GCA_000186565.1_ASM18656v1	21282446	A118
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.32109	66.5	-	JVTD01	135	6011	5778	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197317	GCA_001076225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/225/GCA_001076225.1_ASM107622v1	26230489	1336_PAER
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07482	39.6	-	FHYO01	36	2286	2035	2/10/16	3/18/17	Contig	SC	SAMEA2149827	GCA_900051495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/495/GCA_900051495.1_10678_6_76	-	2690STDY5561880
Escherichia coli O127:H6 str. E2348/69 substr. CVDNalr	1336205	PRJNA204931	204931	Proteobacteria	Gammaproteobacteria	4.94084	50.5	-	ASZR01	127	5245	4872	7/29/13	2/25/17	Contig	Institute for Genome Sciences	SAMN02435804	GCA_000442065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/065/GCA_000442065.2_Escherichia_coli_O127_H6_str._E2348_69_substr._CVDNalr	23913321	E2348/69 substr. CVDNalr
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3782	65.6	-	MMRT01	12	4256	4093	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918688	GCA_001847545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/545/GCA_001847545.1_ASM184754v1	-	03-R0988
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.00787	52.1	-	JYPP01	183	5172	4898	12/21/15	3/1/17	Contig	FDA	SAMN02911915	GCA_001474005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/005/GCA_001474005.1_Salmonella_enterica_CVM_43746_v1.0	-	CVM 43746
Staphylococcus aureus H43986	1417101	PRJNA226852	226852	Terrabacteria group	Firmicutes	2.89563	32.7	-	JERH01	13	3052	2892	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398793	GCA_000578755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/755/GCA_000578755.1_Stap_aure_H43986_V1	-	H43986
Staphylococcus aureus H44015	1417103	PRJNA226854	226854	Terrabacteria group	Firmicutes	2.85675	32.7	-	JERI01	16	2992	2824	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398795	GCA_000578775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/775/GCA_000578775.1_Stap_aure_H44015_V1	-	H44015
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.67426	52.1	-	JYPR01	166	4754	4507	12/21/15	3/1/17	Contig	FDA	SAMN02911917	GCA_001474025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/025/GCA_001474025.1_Salmonella_enterica_CVM_43748_v1.0	-	CVM 43748
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38683	65.6	-	MMRR01	23	4265	4098	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918690	GCA_001847565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/565/GCA_001847565.1_ASM184756v1	-	03-R0877
Escherichia coli O127:H6 str. E2348/69 substr. UMD753	1336206	PRJNA204937	204937	Proteobacteria	Gammaproteobacteria	4.94114	50.5	-	ASZS01	130	5255	4877	7/29/13	2/25/17	Contig	Institute for Genome Sciences	SAMN02435803	GCA_000442085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/085/GCA_000442085.2_Escherichia_coli_O127_H6_str._E2348_69_substr._UMD753	23913321	E2348/69 substr. UMD753
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07653	39.6	-	FHYR01	41	2281	2027	2/10/16	3/18/17	Contig	SC	SAMEA2146735	GCA_900051505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/505/GCA_900051505.1_10678_6_83	-	2690STDY5561902
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.95785	65.9	-	JVCP01	203	6700	6426	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197747	GCA_001076545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/545/GCA_001076545.1_ASM107654v1	26230489	549_PAER
Acinetobacter baumannii	470	PRJNA277618	277618	Proteobacteria	Gammaproteobacteria	3.64642	39	-	JZUF01	16	3426	2388	4/3/15	5/27/15	Scaffold	The Chinese University of Hong Kong	SAMN03394596	GCA_000968965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/968/965/GCA_000968965.1_ASM96896v1	25977429	718532
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.66942	57.1	-	FLVE01	52	5728	5422	7/14/16	2/21/17	Scaffold	SC	SAMEA3531842	GCA_900092695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/695/GCA_900092695.1_18090_6_73	-	PB425
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.51931	57.3	-	FLVD01	35	5607	5328	7/14/16	2/21/17	Scaffold	SC	SAMEA3531816	GCA_900092705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/705/GCA_900092705.1_18090_6_68	-	PB209
Acinetobacter baumannii 113	1306024	PRJNA189666	189666	Proteobacteria	Gammaproteobacteria	3.91221	38.8	-	APLO01	171	-	-	3/9/16	3/9/16	Scaffold	Institut fuer Medizinische Mikrobiologie	SAMN01983847	GCA_001584465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/465/GCA_001584465.1_ASM158446v1	-	113
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	6.77081	66.1	-	JVET01	192	6541	6118	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197691	GCA_001076855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/855/GCA_001076855.1_ASM107685v1	26230489	499_PAER
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07343	39.6	-	FHYS01	39	2271	2029	2/10/16	3/8/17	Contig	SC	SAMEA2144426	GCA_900051515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/515/GCA_900051515.1_10678_6_85	-	2690STDY5561797
Escherichia coli C12_92	1124986	PRJNA78535	78535	Proteobacteria	Gammaproteobacteria	5.11013	50.4	-	AIAE01	222	5335	4947	8/13/13	2/25/17	Contig	University of Maryland School of Medicine	SAMN02435957	GCA_000446075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/075/GCA_000446075.2_ASM44607v2	-	C12_92
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37605	65.6	-	MMRP01	14	4256	4079	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918692	GCA_001847585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/585/GCA_001847585.1_ASM184758v1	-	04-R0274
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.72281	52.1	-	JYPS01	84	4839	4595	12/21/15	3/1/17	Contig	FDA	SAMN02911918	GCA_001474045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/045/GCA_001474045.1_Salmonella_enterica_CVM_43749_v1.0	-	CVM 43749
Staphylococcus aureus M42496	1417104	PRJNA226855	226855	Terrabacteria group	Firmicutes	2.93294	32.8	-	JERJ01	56	3097	2920	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398796	GCA_000578795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/795/GCA_000578795.1_Stap_aure_M42496_V1	-	M42496
Staphylococcus aureus T89906	1417105	PRJNA226856	226856	Terrabacteria group	Firmicutes	2.89451	32.7	-	JERK01	15	3056	2894	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398797	GCA_000578815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/815/GCA_000578815.1_Stap_aure_T89906_V1	-	T89906
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.01441	52.2	-	JYPT01	99	5206	4951	12/21/15	3/1/17	Contig	FDA	SAMN02911919	GCA_001474065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/065/GCA_001474065.1_Salmonella_enterica_CVM_43750_v1.0	-	CVM 43750
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41136	65.6	-	MMRQ01	25	4282	4106	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918691	GCA_001847595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/595/GCA_001847595.1_ASM184759v1	-	03-04003
Escherichia coli C1244_91	1124985	PRJNA78533	78533	Proteobacteria	Gammaproteobacteria	5.28916	50.3	-	AIAD01	304	5618	5192	8/13/13	2/25/17	Contig	University of Maryland School of Medicine	SAMN02435999	GCA_000446095.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/095/GCA_000446095.2_ASM44609v2	-	C1244_91
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07638	39.6	-	FIAM01	36	2275	2032	2/10/16	3/13/17	Contig	SC	SAMEA2143422	GCA_900051535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/535/GCA_900051535.1_10678_7_5	-	2690STDY5561714
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	7.03728	65.9	-	JUYD01	435	7021	6387	7/10/15	3/17/17	Scaffold	University of Washington	SAMN03197863	GCA_001077135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/135/GCA_001077135.1_ASM107713v1	26230489	660_PAER
Acinetobacter baumannii 278	1306025	PRJNA193616	193616	Proteobacteria	Gammaproteobacteria	3.91711	38.8	-	ASHG01	206	-	-	3/9/16	3/9/16	Scaffold	Institut fuer Medizinische Mikrobiologie	SAMN01983849	GCA_001584475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/475/GCA_001584475.1_ASM158447v1	-	278
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.91119	56.9	-	FLVI01	69	6118	5807	7/14/16	2/21/17	Scaffold	SC	SAMEA3531812	GCA_900092715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/715/GCA_900092715.1_18090_6_66	-	PB173
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.36656	57.2	-	FLVF01	34	5343	5047	7/14/16	2/21/17	Scaffold	SC	SAMEA3531857	GCA_900092725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/725/GCA_900092725.1_18090_8_62	-	PB495
Acinetobacter baumannii 292	1308537	PRJNA193614	193614	Proteobacteria	Gammaproteobacteria	3.84057	38.9	-	ASHY01	212	-	-	3/9/16	3/9/16	Scaffold	Institut fuer Medizinische Mikrobiologie	SAMN02729948	GCA_001584485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/584/485/GCA_001584485.1_ASM158448v1	-	292
Pseudomonas aeruginosa	287	PRJNA289003	289003	Proteobacteria	Gammaproteobacteria	6.44211	66.6	-	LGJE01	62	6157	5848	9/9/15	3/18/17	Scaffold	Universite de Lyon	SAMN03840665	GCA_001280745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/280/745/GCA_001280745.1_ASM128074v1	26586898	EML545
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07687	39.6	-	FIBX01	32	2284	2035	2/10/16	3/13/17	Contig	SC	SAMEA2145380	GCA_900051545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/545/GCA_900051545.1_10678_7_88	-	2690STDY5561781
Escherichia coli C1214_90	1124984	PRJNA78531	78531	Proteobacteria	Gammaproteobacteria	5.57728	50.3	-	AIAC01	512	6089	5594	8/13/13	2/25/17	Contig	University of Maryland School of Medicine	SAMN02435901	GCA_000446115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/115/GCA_000446115.2_ASM44611v2	-	C1214_90
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38126	65.6	-	MMRO01	13	4255	4084	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918693	GCA_001847615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/615/GCA_001847615.1_ASM184761v1	-	03-R0839
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91819	52	-	JYPU01	53	5069	4746	12/21/15	3/1/17	Contig	FDA	SAMN02911920	GCA_001474075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/075/GCA_001474075.1_Salmonella_enterica_CVM_43751_v1.0	-	CVM 43751
Staphylococcus aureus M45704	1417106	PRJNA226857	226857	Terrabacteria group	Firmicutes	2.84677	32.8	-	JERL01	17	2999	2836	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398798	GCA_000578835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/835/GCA_000578835.1_Stap_aure_M45704_V1	-	M45704
Staphylococcus aureus W70590	1417107	PRJNA226858	226858	Terrabacteria group	Firmicutes	2.86899	32.7	-	JERM01	8	3023	2867	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398799	GCA_000578855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/855/GCA_000578855.1_Stap_aure_W70590_V1	-	W70590
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.94254	51.9	-	JYPV01	136	5052	4785	12/21/15	3/1/17	Contig	FDA	SAMN02911921	GCA_001474095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/095/GCA_001474095.1_Salmonella_enterica_CVM_43752_v1.0	-	CVM 43752
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40327	65.6	-	MMRN01	24	4280	4103	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918694	GCA_001847645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/645/GCA_001847645.1_ASM184764v1	-	03-R0789
Escherichia coli C154_11	1124987	PRJNA78537	78537	Proteobacteria	Gammaproteobacteria	5.16029	50.4	-	AIAF01	349	5450	5064	8/13/13	2/25/17	Contig	University of Maryland School of Medicine	SAMN02436000	GCA_000446135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/135/GCA_000446135.2_ASM44613v2	-	C154_11
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07504	39.6	-	FIDU01	31	2280	2027	2/10/16	3/6/17	Contig	SC	SAMEA2150160	GCA_900051555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/555/GCA_900051555.1_10702_5_6	-	2690STDY5561929
Pseudomonas aeruginosa	287	PRJNA295121	295121	Proteobacteria	Gammaproteobacteria	6.15179	66.4	-	LJJO01	126	5884	5468	9/21/15	3/18/17	Scaffold	Macquarie University	SAMN04041443	GCA_001295275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/275/GCA_001295275.1_ASM129527v1	26431321	PASS2
Acinetobacter baumannii UMB003	933265	PRJNA60847	60847	Proteobacteria	Gammaproteobacteria	4.18871	39.1	-	AEPM01	96	-	-	12/21/10	12/5/13	Contig	Institute for Genome Sciences	SAMN02436014	GCA_000184515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/184/515/GCA_000184515.2_ASM18451v2	21639920	UMB003
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.53299	57.3	-	FLVH01	54	5635	5364	7/14/16	2/21/17	Scaffold	SC	SAMEA3531836	GCA_900092735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/735/GCA_900092735.1_18090_6_70	-	PB327
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.62179	56.9	-	FLXE01	55	5725	5443	7/16/16	2/21/17	Scaffold	SC	SAMEA3531792	GCA_900092785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/785/GCA_900092785.1_18090_8_40	-	PB65
Acinetobacter baumannii 4190	886890	PRJNA52399	52399	Proteobacteria	Gammaproteobacteria	4.03229	39.0759	plasmid p1ABST25:AEPA01000395.1; plasmid p2ABST25:AEPA01000396.1	AEPA01	396	-	-	2/17/11	1/8/14	Contig	University of Birmingham	SAMN02471587	GCA_000189715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/715/GCA_000189715.2_ASM18971v2	21398548	4190
Pseudomonas aeruginosa	287	PRJNA295123	295123	Proteobacteria	Gammaproteobacteria	6.3245	66.5	-	LJJQ01	138	6071	5839	9/21/15	3/18/17	Scaffold	Macquarie University	SAMN04041445	GCA_001295285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/285/GCA_001295285.1_ASM129528v1	26431321	PASS4
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.12061	39.5	-	FIWD01	57	2362	2096	2/10/16	3/6/17	Contig	SC	SAMEA1033565	GCA_900051615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/615/GCA_900051615.1_6972_8_32	-	A31198a
Escherichia coli C155_11	1124988	PRJNA78539	78539	Proteobacteria	Gammaproteobacteria	5.49284	50.3	-	AIAG01	563	5994	5524	8/13/13	2/25/17	Contig	University of Maryland School of Medicine	SAMN02435958	GCA_000446155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/155/GCA_000446155.2_ASM44615v2	-	C155_11
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37527	65.6	-	MMRM01	2	4245	4084	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918695	GCA_001847665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/665/GCA_001847665.1_ASM184766v1	-	03-R1256
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.98546	52.2	-	JYPX01	71	5145	4905	12/21/15	3/1/17	Contig	FDA	SAMN02911923	GCA_001474125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/125/GCA_001474125.1_Salmonella_enterica_CVM_43754_v1.0	-	CVM 43754
Staphylococcus aureus W70599	1417108	PRJNA226859	226859	Terrabacteria group	Firmicutes	2.85067	32.8	-	JERN01	40	2971	2835	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398800	GCA_000578875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/875/GCA_000578875.1_Stap_aure_W70599_V1	-	W70599
Staphylococcus aureus H47171	1417109	PRJNA226860	226860	Terrabacteria group	Firmicutes	2.92175	32.8	-	JERO01	62	3078	2918	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398801	GCA_000578895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/895/GCA_000578895.1_Stap_aure_H47171_V1	-	H47171
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.72284	52.1	-	JYPY01	55	4845	4596	12/21/15	3/1/17	Contig	FDA	SAMN02911924	GCA_001474135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/135/GCA_001474135.1_Salmonella_enterica_CVM_43755_v1.0	-	CVM 43755
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39388	65.6	-	MMRJ01	27	4281	4105	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918698	GCA_001847725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/725/GCA_001847725.1_ASM184772v1	-	03-R0918
Escherichia coli C157_11	1124989	PRJNA78541	78541	Proteobacteria	Gammaproteobacteria	5.48878	50.5	-	AIAH01	480	5884	5414	8/13/13	2/25/17	Contig	University of Maryland School of Medicine	SAMN02436001	GCA_000446175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/175/GCA_000446175.2_ASM44617v2	-	C157_11
Streptococcus pneumoniae	1313	PRJEB2098	203734	Terrabacteria group	Firmicutes	2.11143	39.6	-	FIYA01	47	2339	2064	2/10/16	3/13/17	Contig	SC	SAMEA807277	GCA_900051645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/645/GCA_900051645.1_4948_3_9	-	B16728
Pseudomonas aeruginosa	287	PRJNA295120	295120	Proteobacteria	Gammaproteobacteria	6.34785	66.3	-	LJJN01	145	6139	5664	9/21/15	3/18/17	Scaffold	Macquarie University	SAMN04041441	GCA_001295295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/295/GCA_001295295.1_ASM129529v1	26431321	PASS1
Acinetobacter baumannii Naval-18	903897	PRJNA53393	53393	Proteobacteria	Gammaproteobacteria	4.45461	38.9274	plasmid pNaval18-131:AFDA02000009.1; plasmid pNaval18-5.7:AFDA02000010.1; plasmid pNaval18-6.1:AFDA02000006.1; plasmid pNaval18-7.0:AFDA02000011.1; plasmid pNaval18-74:AFDA02000007.1; plasmid pNaval18-8.4:AFDA02000008.1	AFDA02	11	4501	4406	5/24/11	11/19/13	Contig	Walter Reed Army Institute of Research	SAMN00114927	GCA_000214965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/214/965/GCA_000214965.2_gacin09v1.0	-	Naval-18
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.30004	57.4	-	FLWR01	24	5300	5069	7/16/16	2/21/17	Scaffold	SC	SAMEA3531785	GCA_900092795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/795/GCA_900092795.1_18090_8_37	-	PB22
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.73958	57.1	-	FLXH01	44	5759	5499	7/16/16	2/21/17	Scaffold	SC	SAMEA3531798	GCA_900092805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/805/GCA_900092805.1_18090_8_43	-	PB121
Acinetobacter baumannii AB4857	1116233	PRJNA77019	77019	Proteobacteria	Gammaproteobacteria	4.02264	39	-	AHAG01	54	-	-	1/6/12	12/5/13	Contig	University of Maryland School of Medicine	SAMN02435900	GCA_000241665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/665/GCA_000241665.2_ASM24166v2	22374953	AB4857
Pseudomonas aeruginosa	287	PRJNA295122	295122	Proteobacteria	Gammaproteobacteria	6.39622	66.3	-	LJJP01	142	6222	5715	9/21/15	3/18/17	Scaffold	Macquarie University	SAMN04041444	GCA_001295345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/345/GCA_001295345.1_ASM129534v1	26431321	PASS3
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07581	39.6	-	FHWT01	33	2278	2030	2/10/16	3/13/17	Contig	SC	SAMEA2150817	GCA_900051855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/855/GCA_900051855.1_10678_6_24	-	2690STDY5561863
Escherichia coli C161_11	1127123	PRJNA79019	79019	Proteobacteria	Gammaproteobacteria	5.24919	50.5	-	AIAI01	414	5534	5097	8/13/13	2/25/17	Contig	University of Maryland School of Medicine	SAMN02435902	GCA_000446195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/195/GCA_000446195.2_ASM44619v2	-	C161_11
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39147	65.6	-	MMRH01	29	4289	4110	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918700	GCA_001847755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/755/GCA_001847755.1_ASM184775v1	-	03-R1251
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.87381	52.1	-	JYQB01	66	4954	4720	12/21/15	3/1/17	Contig	FDA	SAMN02911927	GCA_001474165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/165/GCA_001474165.1_Salmonella_enterica_CVM_43758_v1.0	-	CVM 43758
Staphylococcus aureus W70568	1417110	PRJNA226861	226861	Terrabacteria group	Firmicutes	2.79941	32.8	-	JERP01	34	2907	2763	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398802	GCA_000578915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/915/GCA_000578915.1_Stap_aure_W70568_V1	-	W70568
Staphylococcus aureus M42514	1417111	PRJNA226862	226862	Terrabacteria group	Firmicutes	2.85874	32.7	-	JERQ01	15	3016	2849	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398803	GCA_000578935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/935/GCA_000578935.1_Stap_aure_M42514_V1	-	M42514
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.79234	52	-	JYQD01	106	4891	4635	12/21/15	3/1/17	Contig	FDA	SAMN02911929	GCA_001474185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/185/GCA_001474185.1_Salmonella_enterica_CVM_43760_v1.0	-	CVM 43760
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.43107	65.6	-	MMRG01	23	4326	4146	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918701	GCA_001847775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/775/GCA_001847775.1_ASM184777v1	-	03-R1294
Escherichia coli C213_10	1127126	PRJNA79025	79025	Proteobacteria	Gammaproteobacteria	4.70254	50.4	-	AIAL01	133	4880	4588	8/13/13	2/25/17	Contig	University of Maryland School of Medicine	SAMN02435959	GCA_000446225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/225/GCA_000446225.2_ASM44622v2	-	C213_10
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07404	39.6	-	FHYJ01	30	2265	2028	2/10/16	3/13/17	Contig	SC	SAMEA2157950	GCA_900051865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/865/GCA_900051865.1_10678_6_68	-	2690STDY5561922
Pseudomonas aeruginosa	287	PRJNA294638	294638	Proteobacteria	Gammaproteobacteria	6.76676	66.1	-	LJZA01	306	6612	6277	11/17/15	3/18/17	Scaffold	Technical University of Denmark	SAMN04028043	GCA_001444745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/745/GCA_001444745.1_ASM144474v1	-	ATCC 33354
Acinetobacter baumannii AB5075	1116234	PRJNA77021	77021	Proteobacteria	Gammaproteobacteria	4.05059	39.1	-	AHAH01	36	-	-	1/6/12	11/3/14	Contig	University of Maryland School of Medicine	SAMN02435946	GCA_000241685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/241/685/GCA_000241685.2_ASM24168v2	22374953	AB5075
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.8944	56.6	-	FLWZ01	69	5949	5608	7/16/16	2/21/17	Scaffold	SC	SAMEA3531870	GCA_900092815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/815/GCA_900092815.1_18090_8_69	-	PB533
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.44621	57.3	-	FLVS01	34	5457	5172	7/16/16	2/21/17	Scaffold	SC	SAMEA3531827	GCA_900092825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/825/GCA_900092825.1_18090_8_52	-	PB283
Acinetobacter baumannii W6976	981328	PRJNA62419	62419	Proteobacteria	Gammaproteobacteria	3.91098	39	-	AIEG01	526	-	-	2/21/12	1/8/14	Contig	University of Birmingham	SAMN02471603	GCA_000248255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/255/GCA_000248255.2_ASM24825v2	23259572	W6976
Pseudomonas aeruginosa	287	PRJNA294638	294638	Proteobacteria	Gammaproteobacteria	6.48044	66.2	-	LJZI01	170	6194	5965	11/17/15	3/18/17	Scaffold	Technical University of Denmark	SAMN04028051	GCA_001444865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/865/GCA_001444865.1_ASM144486v1	-	ATCC 33362
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07372	39.6	-	FHYM01	38	2277	2030	2/10/16	3/6/17	Contig	SC	SAMEA2153460	GCA_900051875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/875/GCA_900051875.1_10678_6_74	-	2690STDY5561894
Escherichia coli OK1114	1134453	PRJNA81127	81127	Proteobacteria	Gammaproteobacteria	5.54857	50.4	-	AICG01	214	6158	5412	8/13/13	8/8/17	Contig	University of Maryland School of Medicine	SAMN02435945	GCA_000446245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/245/GCA_000446245.1_ASM44624v1	-	OK1114
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34587	65.6	-	MMRF01	14	4239	4077	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918702	GCA_001847815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/815/GCA_001847815.1_ASM184781v1	-	03-R0717
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.96967	52.1	-	JYQE01	61	5122	4883	12/21/15	3/1/17	Contig	FDA	SAMN02911930	GCA_001474205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/205/GCA_001474205.1_Salmonella_enterica_CVM_43761_v1.0	-	CVM 43761
Staphylococcus aureus H47183	1417113	PRJNA226864	226864	Terrabacteria group	Firmicutes	2.83635	32.8	-	JERR01	43	2957	2778	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398805	GCA_000578955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/955/GCA_000578955.1_Stap_aure_H47183_V1	-	H47183
Staphylococcus aureus M42518	1417114	PRJNA226865	226865	Terrabacteria group	Firmicutes	2.88497	32.8	-	JERS01	49	3012	2876	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398806	GCA_000578975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/975/GCA_000578975.1_Stap_aure_M42518_V1	-	M42518
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.84964	52.3	-	JYQG01	87	4929	4697	12/21/15	3/1/17	Contig	FDA	SAMN02911932	GCA_001474225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/225/GCA_001474225.1_Salmonella_enterica_CVM_43763_v1.0	-	CVM 43763
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41813	65.6	-	MMQW01	26	4316	4142	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918711	GCA_001847905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/905/GCA_001847905.1_ASM184790v1	-	05-17842
Escherichia coli C166_11	1136137	PRJNA80973	80973	Proteobacteria	Gammaproteobacteria	5.44523	50.4	-	AICF01	469	5884	5459	8/13/13	2/25/17	Contig	University of Maryland School of Medicine	SAMN02435944	GCA_000446265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/265/GCA_000446265.2_ASM44626v2	-	C1214_90
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07306	39.6	-	FHYQ01	40	2270	2031	2/10/16	3/13/17	Contig	SC	SAMEA1965704	GCA_900051885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/885/GCA_900051885.1_10678_6_82	-	2690STDY5561799
Pseudomonas aeruginosa	287	PRJNA294638	294638	Proteobacteria	Gammaproteobacteria	6.6024	66.1	-	LJZL01	159	6376	6128	11/17/15	3/18/17	Scaffold	Technical University of Denmark	SAMN04028054	GCA_001444925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/925/GCA_001444925.1_ASM144492v1	-	ATCC 43390
Acinetobacter baumannii ABNIH5	1094469	PRJNA73903	73903	Proteobacteria	Gammaproteobacteria	3.94018	39.2	-	APAW01	177	3760	3751	4/5/13	1/8/14	Contig	NISC	SAMN02470681	GCA_000353935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/935/GCA_000353935.1_ABNIH5_1	23564252	ABNIH5
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.58144	57.2	-	FLWA01	53	5590	5321	7/16/16	2/21/17	Scaffold	SC	SAMEA3531802	GCA_900092835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/835/GCA_900092835.1_18090_6_65	-	PB127
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.74569	57.5	-	FLWE01	58	5840	5494	7/16/16	2/21/17	Scaffold	SC	SAMEA3531844	GCA_900092845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/845/GCA_900092845.1_18090_8_57	-	PB439
Acinetobacter baumannii ABNIH6	1094470	PRJNA73905	73905	Proteobacteria	Gammaproteobacteria	3.99105	39.1	-	APAX01	175	3825	3816	4/5/13	1/8/14	Contig	NISC	SAMN02470695	GCA_000353955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/955/GCA_000353955.1_ABNIH6_1	23564252	ABNIH6
Pseudomonas aeruginosa	287	PRJNA294638	294638	Proteobacteria	Gammaproteobacteria	6.65459	66.1	-	LJZE01	253	6493	6175	11/17/15	3/18/17	Scaffold	Technical University of Denmark	SAMN04028047	GCA_001444955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/955/GCA_001444955.1_ASM144495v1	-	ATCC 33358
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07535	39.6	-	FIAX01	32	2274	2033	2/10/16	3/13/17	Contig	SC	SAMEA2162760	GCA_900051895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/895/GCA_900051895.1_10678_7_60	-	2690STDY5561682
Escherichia coli C2139_99	1126888	PRJNA79235	79235	Proteobacteria	Gammaproteobacteria	4.83642	50.6	-	AIAM01	152	4984	4689	8/13/13	2/25/17	Contig	IGS	SAMN02435938	GCA_000446285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/285/GCA_000446285.2_ASM44628v2	-	C2139_99
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40691	65.6	-	MMQZ01	31	4302	4093	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918708	GCA_001847915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/915/GCA_001847915.1_ASM184791v1	-	04-R0615
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.89927	52.1	-	JYQH01	115	5058	4771	12/21/15	3/1/17	Contig	FDA	SAMN02911933	GCA_001474245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/245/GCA_001474245.1_Salmonella_enterica_CVM_43764_v1.0	-	CVM 43764
Staphylococcus aureus F82568	1417115	PRJNA226866	226866	Terrabacteria group	Firmicutes	2.86831	32.7	-	JERT01	13	3018	2860	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398807	GCA_000578995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/578/995/GCA_000578995.1_Stap_aure_F82568_V1	-	F82568
Staphylococcus aureus F82573	1417116	PRJNA226867	226867	Terrabacteria group	Firmicutes	2.87702	32.8	-	JERU01	43	3042	2875	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398808	GCA_000579015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/015/GCA_000579015.1_Stap_aure_F82573_V1	-	F82573
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.96964	52.1	-	JYQJ01	143	5154	4835	12/21/15	3/1/17	Contig	FDA	SAMN02911935	GCA_001474255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/255/GCA_001474255.1_Salmonella_enterica_CVM_43766_v1.0	-	CVM 43766
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39207	65.6	-	MMQV01	30	4292	4117	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918712	GCA_001847985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/985/GCA_001847985.1_ASM184798v1	-	05-13131
Escherichia coli C238_91	1126889	PRJNA79237	79237	Proteobacteria	Gammaproteobacteria	5.35844	50.3	-	AIAN01	512	5793	5334	8/13/13	2/25/17	Contig	IGS	SAMN02435960	GCA_000446305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/305/GCA_000446305.2_ASM44630v2	-	C238_91
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07298	39.6	-	FICI01	29	2276	2025	2/10/16	3/13/17	Contig	SC	SAMEA2157783	GCA_900051905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/905/GCA_900051905.1_10702_5_2	-	2690STDY5561926
Pseudomonas aeruginosa	287	PRJNA294638	294638	Proteobacteria	Gammaproteobacteria	6.44595	66.6	-	LJZF01	273	6243	5823	11/17/15	3/18/17	Scaffold	Technical University of Denmark	SAMN04028048	GCA_001444975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/444/975/GCA_001444975.1_ASM144497v1	-	ATCC 33359
Acinetobacter baumannii ABNIH10	1094474	PRJNA73913	73913	Proteobacteria	Gammaproteobacteria	3.89737	39.2	-	APAZ01	886	4205	4150	4/5/13	1/8/14	Contig	NISC	SAMN02470694	GCA_000353995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/353/995/GCA_000353995.1_ABNIH10_1	23564252	ABNIH10
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.41278	57.4	-	FLVP01	32	5357	5121	7/16/16	2/21/17	Scaffold	SC	SAMEA3531809	GCA_900092855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/855/GCA_900092855.1_18090_8_48	-	PB171
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.35136	57.2	-	FLWW01	33	5319	5089	7/16/16	2/21/17	Scaffold	SC	SAMEA3531874	GCA_900092865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/865/GCA_900092865.1_18090_8_72	-	W2-1-ERG1
Acinetobacter baumannii str. Perm	1349824	PRJNA209318	209318	Proteobacteria	Gammaproteobacteria	3.6836	39	-	AUZL01	279	-	-	9/6/13	1/8/14	Contig	North-Western State Medical University named after I.I. Mechnikov	SAMN02470711	GCA_000464705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/705/GCA_000464705.1_ASM46470v1	-	Perm
Pseudomonas aeruginosa	287	PRJNA294638	294638	Proteobacteria	Gammaproteobacteria	6.69868	66.1	-	LJZM01	233	6548	6242	11/17/15	3/18/17	Scaffold	Technical University of Denmark	SAMN04028055	GCA_001445005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/005/GCA_001445005.1_ASM144500v1	-	ATCC 43731
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07649	39.6	-	FICM01	33	2275	2034	2/10/16	3/15/17	Contig	SC	SAMEA2154056	GCA_900051915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/915/GCA_900051915.1_10702_5_24	-	2690STDY5561810
Escherichia coli C260_92	1126890	PRJNA79239	79239	Proteobacteria	Gammaproteobacteria	4.71309	50.5	-	AIAO01	202	4937	4596	8/13/13	2/25/17	Contig	IGS	SAMN02435961	GCA_000446325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/325/GCA_000446325.2_ASM44632v2	-	C260_92
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39262	65.6	-	MMPY01	34	4278	4105	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918736	GCA_001848015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/015/GCA_001848015.1_ASM184801v1	-	01-R1134
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.73597	52.2	-	JYQK01	61	4820	4594	12/21/15	3/1/17	Contig	FDA	SAMN02911936	GCA_001474275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/275/GCA_001474275.1_Salmonella_enterica_CVM_43767_v1.0	-	CVM 43767
Staphylococcus aureus F82600	1417119	PRJNA226870	226870	Terrabacteria group	Firmicutes	2.7756	32.7	-	JERV01	37	2883	2703	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398811	GCA_000579035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/035/GCA_000579035.1_Stap_aure_F82600_V1	-	F82600
Staphylococcus aureus M49455	1417120	PRJNA226871	226871	Terrabacteria group	Firmicutes	2.89025	32.7	-	JERW01	13	3058	2895	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398812	GCA_000579055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/055/GCA_000579055.1_Stap_aure_M49455_V1	-	M49455
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.34878	52.1	-	JYQL01	87	5618	5310	12/21/15	3/1/17	Contig	FDA	SAMN02911937	GCA_001474305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/305/GCA_001474305.1_Salmonella_enterica_CVM_43768_v1.0	-	CVM 43768
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38492	65.6	-	MMPS01	11	4264	4100	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918742	GCA_001848145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/145/GCA_001848145.1_ASM184814v1	-	98-R794
Escherichia coli C262_10	1126891	PRJNA79241	79241	Proteobacteria	Gammaproteobacteria	4.72172	50.5	-	AIAP01	186	4963	4657	8/13/13	2/25/17	Contig	IGS	SAMN02435903	GCA_000446345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/345/GCA_000446345.2_ASM44634v2	-	C262_10
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07445	39.6	-	FIDQ01	31	2277	2028	2/10/16	3/18/17	Contig	SC	SAMEA2144842	GCA_900051925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/925/GCA_900051925.1_10702_5_52	-	2690STDY5561702
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.25922	66.6	-	LLKV01	53	5930	5764	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128478	GCA_001449145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/145/GCA_001449145.1_WH-SGI-V-07060	26604259	WH-SGI-V-07060
Acinetobacter baumannii MRY09-0642	1340174	PRJDB1131	231360	Proteobacteria	Gammaproteobacteria	3.74654	39.1	-	BASA01	148	-	-	6/4/13	9/16/15	Contig	"National Institute of Infectious Diseases, Japan"	SAMD00036743	GCA_000509305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/509/305/GCA_000509305.1_ASM50930v1	23868126	-
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.60716	57.1	-	FLXA01	33	5681	5418	7/16/16	2/21/17	Scaffold	SC	SAMEA3531866	GCA_900092875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/875/GCA_900092875.1_18090_8_67	-	PB517
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.40263	57.3	-	FLWY01	30	5377	5127	7/16/16	2/21/17	Scaffold	SC	SAMEA3531796	GCA_900092885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/885/GCA_900092885.1_18090_8_42	-	PB107
Acinetobacter baumannii MRY12-0277	1340176	PRJDB1133	231362	Proteobacteria	Gammaproteobacteria	3.82974	39.1	-	BASC01	106	-	-	6/4/13	9/15/15	Contig	"National Institute of Infectious Diseases, Japan"	SAMD00036745	GCA_000509345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/509/345/GCA_000509345.1_ASM50934v1	23868126	-
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.37992	66.5	-	LLKY01	57	6056	5898	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128481	GCA_001449155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/155/GCA_001449155.1_WH-SGI-V-07058	26604259	WH-SGI-V-07058
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.07943	39.6	-	FIXY01	71	2280	2024	2/10/16	3/5/17	Contig	SC	SAMEA1033906	GCA_900052035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/035/GCA_900052035.1_6938_4_6	-	D48490
Escherichia coli C283_09	1126892	PRJNA79243	79243	Proteobacteria	Gammaproteobacteria	5.20165	50.3	-	AIAQ01	396	5606	5152	8/13/13	2/25/17	Contig	IGS	SAMN02436003	GCA_000446365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/365/GCA_000446365.2_ASM44636v2	-	C283_09
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38862	65.6	-	MMPR01	35	4280	4107	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918743	GCA_001848175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/175/GCA_001848175.1_ASM184817v1	-	03-R0061
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.10864	52	-	JYQM01	101	5324	5046	12/21/15	3/1/17	Contig	FDA	SAMN02911938	GCA_001474325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/325/GCA_001474325.1_Salmonella_enterica_CVM_43769_v1.0	-	CVM 43769
Staphylococcus aureus H81433	1417121	PRJNA226872	226872	Terrabacteria group	Firmicutes	2.81697	32.7	-	JERX01	53	2913	2715	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398813	GCA_000579075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/075/GCA_000579075.1_Stap_aure_H81433_V1	-	H81433
Staphylococcus aureus M49474	1417122	PRJNA226873	226873	Terrabacteria group	Firmicutes	2.85994	32.8	-	JERY01	1	3003	2849	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398814	GCA_000579095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/095/GCA_000579095.1_Stap_aure_M49474_V1	-	M49474
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.86154	52.2	-	JYQN01	104	4976	4712	12/21/15	3/1/17	Contig	FDA	SAMN02911939	GCA_001474335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/335/GCA_001474335.1_Salmonella_enterica_CVM_43770_v1.0	-	CVM 43770
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35445	65.6	-	MMPJ01	17	4251	4079	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918751	GCA_001848285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/285/GCA_001848285.1_ASM184828v1	-	01-R0440
Escherichia coli C295_10	1126893	PRJNA79245	79245	Proteobacteria	Gammaproteobacteria	4.66447	50.6	-	AIAR01	128	4873	4594	8/13/13	2/25/17	Contig	IGS	SAMN02435939	GCA_000446385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/385/GCA_000446385.2_ASM44638v2	-	C295_10
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07622	39.6	-	FHYI01	33	2279	2030	2/10/16	3/13/17	Contig	SC	SAMEA2161329	GCA_900052185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/185/GCA_900052185.1_10678_6_69	-	2690STDY5561862
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.43982	66.1	-	LLLM01	90	6204	5966	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128495	GCA_001449345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/345/GCA_001449345.1_WH-SGI-V-07062	26604259	WH-SGI-V-07062
Acinetobacter baumannii MDR_MMC4	1435047	PRJNA231087	231087	Proteobacteria	Gammaproteobacteria	3.98511	39	-	AZNQ01	146	4063	3904	1/23/14	2/22/14	Contig	Meharry Medical College	SAMN02641527	GCA_000522525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/522/525/GCA_000522525.1_AB-MDR-MMC4	20609238	MDR_MMC4
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.48783	57.4	-	FLWK01	28	5544	5293	7/16/16	2/21/17	Scaffold	SC	SAMEA3531804	GCA_900092895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/895/GCA_900092895.1_18090_8_45	-	PB129
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.50704	57.3	-	FLWM01	47	5599	5332	7/16/16	2/21/17	Scaffold	SC	SAMEA3531837	GCA_900092905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/905/GCA_900092905.1_18090_6_71	-	PB366
Acinetobacter baumannii 1457504	1310717	PRJNA194793	194793	Proteobacteria	Gammaproteobacteria	4.01549	39.3	-	JFEG02	14	4162	4057	3/3/14	4/2/14	Contig	Institute for Genome Sciences	SAMN02404496	GCA_000584375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/584/375/GCA_000584375.2_ASM58437v2	-	1457504
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.37318	66.6	-	LLLP01	87	6069	5783	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128498	GCA_001449385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/385/GCA_001449385.1_WH-SGI-V-07072	26604259	WH-SGI-V-07072
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07429	39.6	-	FIBU01	33	2282	2032	2/10/16	3/13/17	Contig	SC	SAMEA2157458	GCA_900052195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/195/GCA_900052195.1_10678_7_85	-	2690STDY5561826
Escherichia coli C341_10	1126895	PRJNA79249	79249	Proteobacteria	Gammaproteobacteria	4.99229	50.7	-	AIAS01	388	5249	4916	8/13/13	2/25/17	Contig	IGS	SAMN02435904	GCA_000446405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/405/GCA_000446405.2_ASM44640v2	-	C341_10
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36697	65.6	-	MMPK01	26	4268	4086	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918750	GCA_001848325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/325/GCA_001848325.1_ASM184832v1	-	00-R1027
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.94213	51.8	-	JYQO01	52	5048	4782	12/21/15	3/1/17	Contig	FDA	SAMN02911940	GCA_001474355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/355/GCA_001474355.1_Salmonella_enterica_CVM_43771_v1.0	-	CVM 43771
Staphylococcus aureus W73676	1417123	PRJNA226874	226874	Terrabacteria group	Firmicutes	2.77837	32.8	-	JERZ01	28	2894	2735	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398815	GCA_000579115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/115/GCA_000579115.1_Stap_aure_W73676_V1	-	W73676
Staphylococcus aureus W73592	1417124	PRJNA226875	226875	Terrabacteria group	Firmicutes	2.77133	32.7	-	JESA01	27	2875	2708	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398816	GCA_000579135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/135/GCA_000579135.1_Stap_aure_W73592_V1	-	W73592
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.00126	52.1	-	JYQQ01	131	5131	4819	12/21/15	3/1/17	Contig	FDA	SAMN02911942	GCA_001474385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/385/GCA_001474385.1_Salmonella_enterica_CVM_43773_v1.0	-	CVM 43773
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38075	65.6	-	MMPH01	11	4262	4096	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918753	GCA_001848345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/345/GCA_001848345.1_ASM184834v1	-	01-R0068
Escherichia coli C343_08	1126896	PRJNA79251	79251	Proteobacteria	Gammaproteobacteria	5.00966	50.6	-	AIAT01	395	5305	4945	8/13/13	2/25/17	Contig	IGS	SAMN02435962	GCA_000446425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/425/GCA_000446425.2_ASM44642v2	-	C343_08
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07438	39.6	-	FIBW01	34	2271	2034	2/10/16	3/15/17	Contig	SC	SAMEA2160432	GCA_900052205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/205/GCA_900052205.1_10678_7_86	-	2690STDY5561869
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.33664	66.5	-	LLLT01	49	6043	5786	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128502	GCA_001449435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/435/GCA_001449435.1_WH-SGI-V-07050	26604259	WH-SGI-V-07050
Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841	575584	PRJDB620	243198	Proteobacteria	Gammaproteobacteria	3.9324	39.1	-	BALA01	118	-	-	4/1/14	6/16/16	Contig	The University of Tokyo	SAMD00012912	GCA_000614705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/705/GCA_000614705.1_ASM61470v1	-	JCM 6841
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.75462	57	-	FLWV01	61	5765	5457	7/16/16	2/22/17	Scaffold	SC	SAMEA3531794	GCA_900092925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/925/GCA_900092925.1_18090_8_41	-	PB94
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.91369	56.7	-	FLWI01	106	6088	5780	7/16/16	2/21/17	Scaffold	SC	SAMEA3531834	GCA_900092935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/935/GCA_900092935.1_18090_8_55	-	PB298
Acinetobacter baumannii 6935	1310575	PRJNA194651	194651	Proteobacteria	Gammaproteobacteria	4.85494	39.2	-	JMHM01	105	4830	4703	5/2/14	5/2/14	Contig	Institute for Genome Sciences	SAMN02692962	GCA_000671455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/455/GCA_000671455.1_ASM67145v1	-	6935
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.70474	66.2	-	LLLV01	64	6362	6172	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128504	GCA_001449485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/485/GCA_001449485.1_WH-SGI-V-07166	26604259	WH-SGI-V-07166
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07633	39.6	-	FIES01	30	2281	2034	2/10/16	3/15/17	Contig	SC	SAMEA2150362	GCA_900052215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/215/GCA_900052215.1_10702_5_83	-	2690STDY5561845
Escherichia coli C347_93	1126897	PRJNA79253	79253	Proteobacteria	Gammaproteobacteria	4.98431	50.5	-	AIAU01	404	5370	4914	8/13/13	2/25/17	Contig	IGS	SAMN02435905	GCA_000446445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/445/GCA_000446445.2_ASM44644v2	-	C347_93
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38988	65.6	-	MMPI01	28	4270	4095	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918752	GCA_001848355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/355/GCA_001848355.1_ASM184835v1	-	99-R719
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.61681	52.3	-	JYQR01	68	4665	4435	12/21/15	3/1/17	Contig	FDA	SAMN02911943	GCA_001474405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/405/GCA_001474405.1_Salmonella_enterica_CVM_43774_v1.0	-	CVM 43774
Staphylococcus aureus H49922	1417126	PRJNA226877	226877	Terrabacteria group	Firmicutes	2.83926	32.7	-	JESB01	17	2987	2830	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398818	GCA_000579155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/155/GCA_000579155.1_Stap_aure_H49922_V1	-	H49922
Staphylococcus aureus H49917	1417127	PRJNA226878	226878	Terrabacteria group	Firmicutes	2.80736	32.7	-	JESC01	34	2926	2777	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398819	GCA_000579175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/175/GCA_000579175.1_Stap_aure_H49917_V1	-	H49917
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.95456	52	-	JYQT01	62	5075	4825	12/21/15	3/1/17	Contig	FDA	SAMN02911945	GCA_001474415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/415/GCA_001474415.1_Salmonella_enterica_CVM_43776_v1.0	-	CVM 43776
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3415	65.6	-	MMPG01	43	4252	4080	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918754	GCA_001848365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/365/GCA_001848365.1_ASM184836v1	-	01-R0290
Escherichia coli C353_09	1126898	PRJNA79255	79255	Proteobacteria	Gammaproteobacteria	5.07752	50.5	-	AIAV01	564	5231	4866	8/13/13	2/25/17	Contig	IGS	SAMN02436004	GCA_000446465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/465/GCA_000446465.2_ASM44646v2	-	C353_09
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.0756	39.6	-	FHWG01	32	2272	2029	2/10/16	3/13/17	Contig	SC	SAMEA2151856	GCA_900052495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/495/GCA_900052495.1_10678_6_12	-	2690STDY5561785
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.99587	65.9	-	LLLW01	105	6834	6602	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128505	GCA_001449505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/505/GCA_001449505.1_WH-SGI-V-07167	26604259	WH-SGI-V-07167
Acinetobacter baumannii 1032359	1310572	PRJNA194648	194648	Proteobacteria	Gammaproteobacteria	4.69054	39	-	JMHK01	630	5198	5060	5/2/14	5/2/14	Contig	Institute for Genome Sciences	SAMN02692946	GCA_000671695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/695/GCA_000671695.1_ASM67169v1	-	1032359
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.7415	57	-	FLVO01	48	5745	5437	7/16/16	2/22/17	Scaffold	SC	SAMEA3531823	GCA_900092945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/945/GCA_900092945.1_18090_6_69	-	PB270
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.34665	57.2	-	FLWD01	35	5331	5071	7/16/16	2/21/17	Scaffold	SC	SAMEA3531877	GCA_900092955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/955/GCA_900092955.1_18090_8_74	-	W2-1-ERY5(G)
Acinetobacter baumannii 1288284	1310709	PRJNA194785	194785	Proteobacteria	Gammaproteobacteria	6.04643	39	-	JMOF01	945	6265	6162	5/6/14	5/6/14	Contig	Institute for Genome Sciences	SAMN02692974	GCA_000681715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/715/GCA_000681715.1_ASM68171v1	-	1288284
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.02307	65.8	-	LLME01	88	6743	6487	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128513	GCA_001449625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/625/GCA_001449625.1_WH-SGI-V-07175	26604259	WH-SGI-V-07175
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07653	39.6	-	FHZB01	34	2278	2036	2/10/16	3/13/17	Contig	SC	SAMEA2163530	GCA_900052505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/505/GCA_900052505.1_10678_7_16	-	2690STDY5561765
Escherichia coli C354_03B	1126899	PRJNA79257	79257	Proteobacteria	Gammaproteobacteria	5.3322	50.3	-	AIAW01	416	5720	5283	8/13/13	2/25/17	Contig	IGS	SAMN02435906	GCA_000446485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/485/GCA_000446485.2_ASM44648v2	-	C354_03B
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39894	65.6	-	MMPE01	18	4280	4110	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918756	GCA_001848425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/425/GCA_001848425.1_ASM184842v1	-	01-R0905
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.03325	52	-	JYQU01	166	5215	4923	12/21/15	3/1/17	Contig	FDA	SAMN02911946	GCA_001474445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/445/GCA_001474445.1_Salmonella_enterica_CVM_43777_v1.0	-	CVM 43777
Staphylococcus aureus F16106	1417132	PRJNA226883	226883	Terrabacteria group	Firmicutes	2.83055	32.8	-	JESD01	42	2950	2776	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398824	GCA_000579195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/195/GCA_000579195.1_Stap_aure_F16106_V1	-	F16106
Staphylococcus aureus F16107	1417133	PRJNA226884	226884	Terrabacteria group	Firmicutes	2.82908	32.7	-	JESE01	45	2936	2792	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398825	GCA_000579215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/215/GCA_000579215.1_Stap_aure_F16107_V1	-	F16107
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.82503	52	-	JYQW01	74	4912	4663	12/21/15	3/1/17	Contig	FDA	SAMN02911948	GCA_001474465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/465/GCA_001474465.1_Salmonella_enterica_CVM_43779_v1.0	-	CVM 43779
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39808	65.6	-	MMPD01	30	4296	4110	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918757	GCA_001848435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/435/GCA_001848435.1_ASM184843v1	-	01-R0648
Escherichia coli C40_11	1126900	PRJNA79259	79259	Proteobacteria	Gammaproteobacteria	5.43305	50.3	-	AIAX01	563	5948	5417	8/13/13	2/25/17	Contig	IGS	SAMN02436005	GCA_000446505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/505/GCA_000446505.2_ASM44650v2	-	C40_11
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.09461	39.6	-	FIVG01	41	2326	2088	2/10/16	3/8/17	Contig	SC	SAMEA1033691	GCA_900052555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/555/GCA_900052555.1_6972_8_28	-	A30992
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.94085	65.8	-	LLMJ01	101	6718	6453	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128518	GCA_001449675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/675/GCA_001449675.1_WH-SGI-V-07180	26604259	WH-SGI-V-07180
Acinetobacter baumannii 135867	1310629	PRJNA194705	194705	Proteobacteria	Gammaproteobacteria	4.61155	39	-	JMNP01	283	4788	4660	5/6/14	5/6/14	Contig	Institute for Genome Sciences	SAMN02692950	GCA_000682195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/195/GCA_000682195.1_ASM68219v1	-	135867
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.62643	57	-	FLWO01	45	5716	5378	7/16/16	2/21/17	Scaffold	SC	SAMEA3531840	GCA_900092965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/965/GCA_900092965.1_18090_6_72	-	PB395
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.99739	56.7	-	FLWJ01	74	6211	5872	7/16/16	2/21/17	Scaffold	SC	SAMEA3531787	GCA_900092975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/975/GCA_900092975.1_18090_6_64	-	PB28
Acinetobacter baumannii 15827	1310631	PRJNA194707	194707	Proteobacteria	Gammaproteobacteria	4.63575	39	-	JMNX01	589	5049	4907	5/6/14	5/6/14	Contig	Institute for Genome Sciences	SAMN02692952	GCA_000682315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/315/GCA_000682315.1_ASM68231v1	-	15827
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.01947	65.8	-	LLMK01	144	6755	6488	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128519	GCA_001449705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/705/GCA_001449705.1_WH-SGI-V-07221	26604259	WH-SGI-V-07221
Streptococcus pneumoniae	1313	PRJEB2110	203866	Terrabacteria group	Firmicutes	2.035	39.6	-	FIWI01	39	2213	1989	2/10/16	3/6/17	Contig	SC	SAMEA971381	GCA_900052585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/585/GCA_900052585.1_4995_8_5	-	D33733
Escherichia coli C418_89	1126901	PRJNA79261	79261	Proteobacteria	Gammaproteobacteria	4.67136	50.8	-	AIAY01	146	4857	4568	8/13/13	2/25/17	Contig	IGS	SAMN02436006	GCA_000446525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/525/GCA_000446525.2_ASM44652v2	-	C418_89
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39351	65.6	-	MMPB01	22	4276	4098	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918759	GCA_001848475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/475/GCA_001848475.1_ASM184847v1	-	00-R0136
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.81196	52.2	-	JYQX01	70	4874	4617	12/21/15	3/1/17	Contig	FDA	SAMN02911949	GCA_001474485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/485/GCA_001474485.1_Salmonella_enterica_CVM_43780_v1.0	-	CVM 43780
Staphylococcus aureus F26021	1417138	PRJNA226890	226890	Terrabacteria group	Firmicutes	2.90544	32.7	-	JESF01	31	3080	2917	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398830	GCA_000579235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/235/GCA_000579235.1_Stap_aure_F26021_V1	-	F26021
Staphylococcus aureus F85414	1417142	PRJNA226894	226894	Terrabacteria group	Firmicutes	2.83774	32.8	-	JESG01	48	2963	2822	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398834	GCA_000579255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/255/GCA_000579255.1_Stap_aure_F85414_V1	-	F85414
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.78497	52	-	JYQZ01	72	4912	4656	12/21/15	3/1/17	Contig	FDA	SAMN02911951	GCA_001474505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/505/GCA_001474505.1_Salmonella_enterica_CVM_43782_v1.0	-	CVM 43782
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38772	65.6	-	MMPA01	1	4261	4105	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918760	GCA_001848505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/505/GCA_001848505.1_ASM184850v1	-	01-R0272
Escherichia coli C458_10	1126902	PRJNA79263	79263	Proteobacteria	Gammaproteobacteria	4.84363	50.7	-	AIAZ01	359	5079	4788	8/13/13	2/25/17	Contig	IGS	SAMN02435963	GCA_000446545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/545/GCA_000446545.2_ASM44654v2	-	C458_10
Streptococcus pneumoniae	1313	PRJEB2110	203866	Terrabacteria group	Firmicutes	2.18635	39.5	-	FIWY01	46	2433	2187	2/10/16	3/13/17	Contig	SC	SAMEA971372	GCA_900052605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/605/GCA_900052605.1_4995_5_2	-	A32273
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.78219	66.1	-	LLND01	103	6511	6303	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128538	GCA_001449935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/449/935/GCA_001449935.1_WH-SGI-V-07232	26604259	WH-SGI-V-07232
Acinetobacter baumannii 929679-598	1310830	PRJNA194906	194906	Proteobacteria	Gammaproteobacteria	4.69835	39.2	-	JMOT01	529	4968	4853	5/6/14	5/6/14	Contig	Institute for Genome Sciences	SAMN02692985	GCA_000682635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/635/GCA_000682635.1_ASM68263v1	-	929679-598
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.71516	57	-	FLWP01	62	5773	5447	7/16/16	2/21/17	Scaffold	SC	SAMEA3531850	GCA_900092985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/985/GCA_900092985.1_18090_8_59	-	PB466
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.42377	57.3	-	FLWU01	23	5448	5225	7/16/16	2/21/17	Scaffold	SC	SAMEA3531790	GCA_900092995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/995/GCA_900092995.1_18090_8_39	-	PB39
Acinetobacter baumannii	470	PRJNA265024	265024	Proteobacteria	Gammaproteobacteria	3.50541	38.5	-	JSUR01	140	-	-	11/17/14	11/17/14	Contig	University of Malaya	SAMN03145055	GCA_000784715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/715/GCA_000784715.1_ASM78471v1	-	1
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.44876	66.1	-	LLNO01	91	6209	5998	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128549	GCA_001450065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/065/GCA_001450065.1_WH-SGI-V-07243	26604259	WH-SGI-V-07243
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.05845	39.6	-	FIXR01	23	2254	2030	2/10/16	3/5/17	Contig	SC	SAMEA1033501	GCA_900052625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/625/GCA_900052625.1_6972_8_33	-	A31265
Escherichia coli C488_07	1126903	PRJNA79265	79265	Proteobacteria	Gammaproteobacteria	4.97379	50.6	-	AIBA01	545	5288	4917	8/13/13	2/25/17	Contig	IGS	SAMN02436007	GCA_000446565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/565/GCA_000446565.2_ASM44656v2	-	C488_07
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3884	65.6	-	MMOZ01	3	4256	4099	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918761	GCA_001848515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/515/GCA_001848515.1_ASM184851v1	-	01-R0185
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91925	52.1	-	JYRC01	101	5061	4814	12/21/15	3/1/17	Contig	FDA	SAMN02911954	GCA_001474515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/515/GCA_001474515.1_Salmonella_enterica_CVM_43785_v1.0	-	CVM 43785
Staphylococcus aureus F85660	1417144	PRJNA226896	226896	Terrabacteria group	Firmicutes	2.91627	32.8	-	JESH01	61	3071	2894	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398836	GCA_000579275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/275/GCA_000579275.1_Stap_aure_F85660_V1	-	F85660
Staphylococcus aureus F85691	1417145	PRJNA226897	226897	Terrabacteria group	Firmicutes	2.8146	32.8	-	JESI01	28	2946	2791	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398837	GCA_000579295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/295/GCA_000579295.1_Stap_aure_F85691_V1	-	F85691
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.98416	52.1	-	JYRF01	96	5150	4894	12/21/15	3/1/17	Contig	FDA	SAMN02911957	GCA_001474545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/545/GCA_001474545.1_Salmonella_enterica_CVM_43788_v1.0	-	CVM 43788
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3716	65.6	-	MMOY01	3	4261	4097	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918762	GCA_001848545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/545/GCA_001848545.1_ASM184854v1	-	01-R0737
Escherichia coli C496_10	1126904	PRJNA79267	79267	Proteobacteria	Gammaproteobacteria	5.02961	50.4	-	AIBB01	359	5369	4987	8/13/13	2/25/17	Contig	IGS	SAMN02436008	GCA_000446585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/585/GCA_000446585.2_ASM44658v2	-	C496_10
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07897	39.6	-	FHWY01	32	2284	2032	2/10/16	3/13/17	Contig	SC	SAMEA2151247	GCA_900052785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/785/GCA_900052785.1_10678_6_3	-	2690STDY5561842
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.81789	65.9	-	LLNS01	105	6599	6372	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128553	GCA_001450115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/115/GCA_001450115.1_WH-SGI-V-07368	26604259	WH-SGI-V-07368
Acinetobacter baumannii	470	PRJNA299302	299302	Proteobacteria	Gammaproteobacteria	4.03929	38.9	-	LMBP01	160	3915	1982	10/29/15	3/31/16	Contig	University of Sao Paulo	SAMN04196795	GCA_001420305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/305/GCA_001420305.1_ASM142030v1	26998609	Ab25
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	6.05457	56.6	-	FLVW01	84	6285	5945	7/16/16	2/21/17	Scaffold	SC	SAMEA3531778	GCA_900093005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/005/GCA_900093005.1_18090_8_34	-	PB5
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.60513	57	-	FLVT01	48	5644	5348	7/16/16	2/21/17	Scaffold	SC	SAMEA3531780	GCA_900093015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/015/GCA_900093015.1_18090_8_35	-	PB14
Acinetobacter baumannii	470	PRJNA299302	299302	Proteobacteria	Gammaproteobacteria	3.82996	38.8	-	LMBN01	763	3957	2747	10/29/15	3/31/16	Contig	University of Sao Paulo	SAMN04196793	GCA_001420325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/325/GCA_001420325.1_ASM142032v1	26998609	Ab18
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.7937	66.2	-	LLNY01	145	6500	6285	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128559	GCA_001450195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/195/GCA_001450195.1_WH-SGI-V-07374	26604259	WH-SGI-V-07374
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07521	39.6	-	FHXI01	28	2266	2036	2/10/16	3/15/17	Contig	SC	SAMEA2156071	GCA_900052795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/795/GCA_900052795.1_10678_6_38	-	2690STDY5561903
Escherichia coli C497_10	1126905	PRJNA79269	79269	Proteobacteria	Gammaproteobacteria	5.07563	50.4	-	AIBC01	287	5351	4989	8/13/13	2/25/17	Contig	IGS	SAMN02435940	GCA_000446605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/605/GCA_000446605.2_ASM44660v2	-	C497_10
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40063	65.6	-	MMOW01	2	4262	4119	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918764	GCA_001848585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/585/GCA_001848585.1_ASM184858v1	-	02-R1024
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.75971	52.2	-	JYRG01	147	4866	4615	12/21/15	3/1/17	Contig	FDA	SAMN02911958	GCA_001474565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/565/GCA_001474565.1_Salmonella_enterica_CVM_43789_v1.0	-	CVM 43789
Staphylococcus aureus F85711	1417146	PRJNA226898	226898	Terrabacteria group	Firmicutes	2.79778	32.8	-	JESJ01	6	2914	2768	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398838	GCA_000579315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/315/GCA_000579315.1_Stap_aure_F85711_V1	-	F85711
Staphylococcus aureus F89053	1417148	PRJNA226900	226900	Terrabacteria group	Firmicutes	2.93944	32.7	-	JESK01	22	3115	2954	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398840	GCA_000579335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/335/GCA_000579335.1_Stap_aure_F89053_V1	-	F89053
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.92551	52.1	-	JYRI01	69	5092	4779	12/21/15	3/1/17	Contig	FDA	SAMN02911960	GCA_001474575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/575/GCA_001474575.1_Salmonella_enterica_CVM_43791_v1.0	-	CVM 43791
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.4016	65.6	-	MMOU01	1	4264	4115	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918766	GCA_001848595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/595/GCA_001848595.1_ASM184859v1	-	01-R0953
Escherichia coli C527_94	1126906	PRJNA79271	79271	Proteobacteria	Gammaproteobacteria	4.98424	50.3	-	AIBD01	238	5234	4913	8/13/13	2/25/17	Contig	IGS	SAMN02435907	GCA_000446625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/625/GCA_000446625.2_ASM44662v2	-	C527_94
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07473	39.6	-	FHYG01	30	2279	2029	2/10/16	3/6/17	Contig	SC	SAMEA2152460	GCA_900052805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/805/GCA_900052805.1_10678_6_66	-	2690STDY5561913
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.0942	66	-	LLOD01	131	6937	6684	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128564	GCA_001450275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/275/GCA_001450275.1_WH-SGI-V-07379	26604259	WH-SGI-V-07379
Acinetobacter baumannii	470	PRJNA299302	299302	Proteobacteria	Gammaproteobacteria	4.0263	38.9	-	LMBO01	120	3895	3397	10/29/15	3/31/16	Contig	University of Sao Paulo	SAMN04196794	GCA_001420335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/335/GCA_001420335.1_ASM142033v1	26998609	Ab23
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.38861	57.2	-	FLVY01	38	5413	5167	7/16/16	2/21/17	Scaffold	SC	SAMEA3531879	GCA_900093025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/025/GCA_900093025.1_18090_8_76	-	W2-5-ERG4
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.60005	57.2	-	FLWN01	40	5660	5428	7/16/16	2/21/17	Scaffold	SC	SAMEA3531862	GCA_900093035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/035/GCA_900093035.1_18090_8_65	-	PB506
Acinetobacter baumannii	470	PRJNA299302	299302	Proteobacteria	Gammaproteobacteria	4.06825	38.8	-	LMBQ01	129	3945	3518	10/29/15	3/31/16	Contig	University of Sao Paulo	SAMN04196796	GCA_001420385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/385/GCA_001420385.1_ASM142038v1	26998609	Ab28
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.33382	66.5	-	LLKX01	78	6014	5834	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128480	GCA_001450345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/345/GCA_001450345.1_WH-SGI-V-07053	26604259	WH-SGI-V-07053
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.09404	39.6	-	FIUF01	39	2328	2085	2/10/16	3/13/17	Contig	SC	SAMEA1033819	GCA_900052875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/875/GCA_900052875.1_6972_8_36	-	A31584
Escherichia coli C581_05	1126907	PRJNA79273	79273	Proteobacteria	Gammaproteobacteria	5.17416	50.5	-	AIBE01	353	5492	5127	8/13/13	2/25/17	Contig	IGS	SAMN02436009	GCA_000446645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/645/GCA_000446645.2_ASM44664v2	-	C581_05
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35524	65.6	-	MMOV01	3	4239	4082	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918765	GCA_001848625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/625/GCA_001848625.1_ASM184862v1	-	01-R0420
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.93958	52.2	-	JYRJ01	82	5113	4879	12/21/15	3/1/17	Contig	FDA	SAMN02911961	GCA_001474605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/605/GCA_001474605.1_Salmonella_enterica_CVM_43792_v1.0	-	CVM 43792
Staphylococcus aureus F89075	1417151	PRJNA226903	226903	Terrabacteria group	Firmicutes	2.84648	32.8	-	JESL01	49	3012	2843	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398843	GCA_000579355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/355/GCA_000579355.1_Stap_aure_F89075_V1	-	F89075
Staphylococcus aureus F89078	1417152	PRJNA226904	226904	Terrabacteria group	Firmicutes	2.88665	32.7	-	JESM01	17	3049	2886	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398844	GCA_000579375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/375/GCA_000579375.1_Stap_aure_F89078_V1	-	F89078
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.75549	52.1	-	JYRL01	57	4845	4605	12/21/15	3/1/17	Contig	FDA	SAMN02911963	GCA_001474625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/625/GCA_001474625.1_Salmonella_enterica_CVM_43794_v1.0	-	CVM 43794
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35316	65.6	-	MMOT01	2	4236	4080	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918767	GCA_001848645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/645/GCA_001848645.1_ASM184864v1	-	01-R0149
Escherichia coli C58_11	1126908	PRJNA79275	79275	Proteobacteria	Gammaproteobacteria	4.68759	50.5	-	AIBF01	65	4830	4563	8/13/13	2/25/17	Contig	IGS	SAMN02435941	GCA_000446665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/665/GCA_000446665.2_ASM44666v2	-	C58_11
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.02868	39.7	-	FIWK01	26	2235	1975	2/10/16	3/13/17	Contig	SC	SAMEA867950	GCA_900052885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/885/GCA_900052885.1_4564_2_2	-	D28531
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.75734	66.4	-	LLKZ01	100	6526	6210	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128482	GCA_001450355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/355/GCA_001450355.1_WH-SGI-V-07055	26604259	WH-SGI-V-07055
Acinetobacter baumannii	470	PRJNA299302	299302	Proteobacteria	Gammaproteobacteria	4.22882	39.1	-	LMBM01	129	4059	3431	10/29/15	3/31/16	Contig	University of Sao Paulo	SAMN04196792	GCA_001420405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/405/GCA_001420405.1_ASM142040v1	26998609	Ab06
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.86072	57.2	-	FLXD01	97	6032	5641	7/16/16	2/21/17	Scaffold	SC	SAMEA3531864	GCA_900093045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/045/GCA_900093045.1_18090_8_66	-	PB509
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.77615	56.8	-	FLVQ01	113	5916	5529	7/16/16	2/21/17	Scaffold	SC	SAMEA3531875	GCA_900093055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/055/GCA_900093055.1_18090_8_73	-	W2-1-ERG2
Acinetobacter baumannii	470	PRJNA297777	297777	Proteobacteria	Gammaproteobacteria	4.4954	39.4	-	LLDH01	2017	3968	3812	11/5/15	11/5/15	Contig	Northwestern University Feinberg School of Medicine	SAMN04145638	GCA_001432865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/865/GCA_001432865.1_ASM143286v1	-	ABBL027
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.91652	66.1	-	LLLC01	90	6681	6462	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128485	GCA_001450385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/385/GCA_001450385.1_WH-SGI-V-07065	26604259	WH-SGI-V-07065
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07455	39.6	-	FIBZ01	32	2282	2033	2/10/16	3/13/17	Contig	SC	SAMEA2156620	GCA_900053105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/105/GCA_900053105.1_10678_7_89	-	2690STDY5561784
Escherichia coli C586_05	1126909	PRJNA79277	79277	Proteobacteria	Gammaproteobacteria	5.03302	50.5	-	AIBG01	210	5310	4955	8/13/13	2/25/17	Contig	IGS	SAMN02435908	GCA_000446685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/685/GCA_000446685.2_ASM44668v2	-	C586_05
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40299	65.6	-	MMOR01	7	4280	4112	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918769	GCA_001848685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/685/GCA_001848685.1_ASM184868v1	-	01-R0265
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.95655	52.1	-	JYRM01	95	5108	4861	12/21/15	3/1/17	Contig	FDA	SAMN02911964	GCA_001474645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/645/GCA_001474645.1_Salmonella_enterica_CVM_43795_v1.0	-	CVM 43795
Staphylococcus aureus F92047	1417153	PRJNA226905	226905	Terrabacteria group	Firmicutes	2.93817	32.7	-	JESN01	20	3126	2956	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398845	GCA_000579395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/395/GCA_000579395.1_Stap_aure_F92047_V1	-	F92047
Staphylococcus aureus F92089	1417155	PRJNA226907	226907	Terrabacteria group	Firmicutes	2.94022	32.8	-	JESO01	54	3099	2918	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398847	GCA_000579415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/415/GCA_000579415.1_Stap_aure_F92089_V1	-	F92089
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.80677	52	-	JYRN01	98	4890	4645	12/21/15	3/1/17	Contig	FDA	SAMN02911965	GCA_001474655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/655/GCA_001474655.1_Salmonella_enterica_CVM_43796_v1.0	-	CVM 43796
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39242	65.6	-	MMOQ01	7	4259	4095	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918770	GCA_001848695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/695/GCA_001848695.1_ASM184869v1	-	00-R1178
Escherichia coli C652_10	1126912	PRJNA79283	79283	Proteobacteria	Gammaproteobacteria	4.91953	50.6	-	AIBI01	208	5148	4850	8/13/13	2/25/17	Contig	IGS	SAMN02436010	GCA_000446705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/705/GCA_000446705.2_ASM44670v2	-	C652_10
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07648	39.6	-	FIBY01	28	2287	2034	2/10/16	3/13/17	Contig	SC	SAMEA2152755	GCA_900053115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/115/GCA_900053115.1_10702_5_1	-	2690STDY5561928
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.73081	65.9	-	LLLF01	67	6500	6290	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128488	GCA_001450405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/405/GCA_001450405.1_WH-SGI-V-07067	26604259	WH-SGI-V-07067
Acinetobacter baumannii	470	PRJEB2801	204563	Proteobacteria	Gammaproteobacteria	5.94676	39	-	FBXJ01	8507	-	-	1/10/16	1/10/16	Contig	SC	SAMEA1317925	GCA_001511955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/955/GCA_001511955.1_7521_8_45	-	D15
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.66609	57.2	-	FLVR01	72	5792	5494	7/16/16	2/21/17	Scaffold	SC	SAMEA3531829	GCA_900093065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/065/GCA_900093065.1_18090_8_53	-	PB291
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.46947	57.3	-	FLWF01	39	5478	5227	7/16/16	2/21/17	Scaffold	SC	SAMEA3531814	GCA_900093085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/085/GCA_900093085.1_18090_6_67	-	PB199
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	3.66709	39.9	-	LUVD01	1459	-	-	5/23/16	5/23/16	Contig	University of Sao Paulo	SAMN04549234	GCA_001649695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/695/GCA_001649695.1_ASM164969v1	-	LIM939
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.11932	66	-	LLMN01	110	6862	6573	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128522	GCA_001450605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/605/GCA_001450605.1_WH-SGI-V-07183	26604259	WH-SGI-V-07183
Streptococcus pneumoniae	1313	PRJEB2102	203746	Terrabacteria group	Firmicutes	2.103	39.6	-	FIWG01	43	2340	2097	2/10/16	3/13/17	Contig	SC	SAMEA685691	GCA_900053265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/265/GCA_900053265.1_4525_7_4	-	D28370
Escherichia coli C654_09	1126913	PRJNA79285	79285	Proteobacteria	Gammaproteobacteria	5.49556	50.4	-	AIBJ01	504	5949	5526	8/13/13	2/25/17	Contig	IGS	SAMN02435909	GCA_000446725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/725/GCA_000446725.2_ASM44672v2	-	C654_09
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40981	65.6	-	MMOP01	5	4286	4089	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918771	GCA_001848745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/745/GCA_001848745.1_ASM184874v1	-	00-R1181
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.69619	52.1	-	JYRO01	67	4807	4555	12/21/15	3/1/17	Contig	FDA	SAMN02911966	GCA_001474685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/685/GCA_001474685.1_Salmonella_enterica_CVM_43797_v1.0	-	CVM 43797
Staphylococcus aureus F92119_080312	1417157	PRJNA226910	226910	Terrabacteria group	Firmicutes	2.89169	32.7	-	JESP01	20	3055	2890	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398849	GCA_000579435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/435/GCA_000579435.1_Stap_aure_F92119_080312_V1	-	F92119_080312
Staphylococcus aureus H49831	1417161	PRJNA226915	226915	Terrabacteria group	Firmicutes	2.89007	32.7	-	JESQ01	11	3054	2897	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398853	GCA_000579455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/455/GCA_000579455.1_Stap_aure_H49831_V1	-	H49831
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.6289	52.3	-	JYRP01	59	4686	4466	12/21/15	3/1/17	Contig	FDA	SAMN02911967	GCA_001474705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/705/GCA_001474705.1_Salmonella_enterica_CVM_43798_v1.0	-	CVM 43798
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38951	65.6	-	MMON01	2	4255	4098	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918773	GCA_001848765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/765/GCA_001848765.1_ASM184876v1	-	00-R1547
Escherichia coli C717_10	1126915	PRJNA79289	79289	Proteobacteria	Gammaproteobacteria	5.1887	50.4	-	AIBK01	444	5544	5115	8/13/13	2/25/17	Contig	IGS	SAMN02435910	GCA_000446745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/745/GCA_000446745.2_ASM44674v2	-	C717_10
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.0075	39.7	-	FIYQ01	39	2188	1985	2/10/16	3/13/17	Contig	SC	SAMEA1033678	GCA_900053315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/315/GCA_900053315.1_6972_8_41	-	A32849
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.67276	66.3	-	LLMT01	104	6367	6178	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128528	GCA_001450635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/635/GCA_001450635.1_WH-SGI-V-07222	26604259	WH-SGI-V-07222
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	2.96212	40.9	-	LUVF01	2528	-	-	5/23/16	5/23/16	Contig	University of Sao Paulo	SAMN04549236	GCA_001649735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/735/GCA_001649735.1_ASM164973v1	-	LIM1011
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.53208	57.2	-	FLWL01	47	5561	5300	7/16/16	2/21/17	Scaffold	SC	SAMEA3531873	GCA_900093095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/095/GCA_900093095.1_18090_8_71	-	W1-5-ERG6
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.66517	56.8	-	FLWQ01	36	5632	5369	7/16/16	2/21/17	Scaffold	SC	SAMEA3531817	GCA_900093105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/105/GCA_900093105.1_18090_8_49	-	PB226
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	3.28792	40.4	-	LUVE01	2010	-	-	5/23/16	5/23/16	Contig	University of Sao Paulo	SAMN04549235	GCA_001649885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/885/GCA_001649885.1_ASM164988v1	-	LIM1013
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.05976	66	-	LLMY01	124	6839	6570	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128533	GCA_001450675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/675/GCA_001450675.1_WH-SGI-V-07227	26604259	WH-SGI-V-07227
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07525	39.6	-	FIBS01	32	2268	2025	2/10/16	3/12/17	Contig	SC	SAMEA2163206	GCA_900053585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/585/GCA_900053585.1_10678_7_80	-	2690STDY5561778
Escherichia coli C725_88	1126916	PRJNA79291	79291	Proteobacteria	Gammaproteobacteria	4.90916	50.4	-	AIBL01	251	5131	4757	8/13/13	2/25/17	Contig	IGS	SAMN02436011	GCA_000446765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/765/GCA_000446765.2_ASM44676v2	-	C725_88
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40178	65.6	-	MMOM01	2	4271	4102	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918774	GCA_001848785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/785/GCA_001848785.1_ASM184878v1	-	02-R1512
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.71275	52.2	-	JYRS01	85	4779	4552	12/21/15	3/1/17	Contig	FDA	SAMN02911970	GCA_001474725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/725/GCA_001474725.1_Salmonella_enterica_CVM_43801_v1.0	-	CVM 43801
Staphylococcus aureus H49864	1417162	PRJNA226916	226916	Terrabacteria group	Firmicutes	2.7608	32.8	-	JESR01	32	2840	2705	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398854	GCA_000579475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/475/GCA_000579475.1_Stap_aure_H49864_V1	-	H49864
Staphylococcus aureus H53188	1417163	PRJNA226917	226917	Terrabacteria group	Firmicutes	2.8132	32.8	-	JESS01	47	2957	2764	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398855	GCA_000579495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/495/GCA_000579495.1_Stap_aure_H53188_V1	-	H53188
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.74988	52.1	-	JYRU01	83	4832	4599	12/21/15	3/1/17	Contig	FDA	SAMN02911972	GCA_001474745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/745/GCA_001474745.1_Salmonella_enterica_CVM_43803_v1.0	-	CVM 43803
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39217	65.6	-	MMOL01	1	4260	4101	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918775	GCA_001848805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/805/GCA_001848805.1_ASM184880v1	-	99-R893
Escherichia coli C732_98	1126917	PRJNA79293	79293	Proteobacteria	Gammaproteobacteria	4.96125	50.6	-	AIBM01	255	5289	4903	8/13/13	2/25/17	Contig	IGS	SAMN02436012	GCA_000446785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/785/GCA_000446785.2_ASM44678v2	-	C732_98
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.12461	39.3	-	FIVY01	51	2362	2111	2/10/16	3/13/17	Contig	SC	SAMEA1033570	GCA_900053645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/645/GCA_900053645.1_7004_3_17	-	B18107
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.5861	66.3	-	LLNB01	68	6281	6084	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128536	GCA_001450705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/705/GCA_001450705.1_WH-SGI-V-07230	26604259	WH-SGI-V-07230
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	3.38305	40.3	-	LUVJ01	1341	-	-	5/23/16	5/23/16	Contig	University of Sao Paulo	SAMN04549240	GCA_001649915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/915/GCA_001649915.1_ASM164991v1	-	LIM1018
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.73685	57	-	FLVX01	56	5945	5636	7/16/16	2/21/17	Scaffold	SC	SAMEA3531782	GCA_900093125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/125/GCA_900093125.1_18090_8_36	-	PB21
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.54027	57.2	-	FLWG01	45	5547	5282	7/16/16	2/21/17	Scaffold	SC	SAMEA3531789	GCA_900093135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/135/GCA_900093135.1_18090_8_38	-	PB38
Acinetobacter baumannii	470	PRJNA301792	301792	Proteobacteria	Gammaproteobacteria	3.63491	40	-	MANQ01	1678	3614	3268	10/12/16	10/12/16	Contig	University of Sao Paulo	SAMN04549247	GCA_001758155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/155/GCA_001758155.1_ASM175815v1	-	LIM3748
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.10114	65.9	-	LLOI01	161	6856	6571	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128569	GCA_001450915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/450/915/GCA_001450915.1_WH-SGI-V-07384	26604259	WH-SGI-V-07384
Streptococcus pneumoniae	1313	PRJEB2110	203866	Terrabacteria group	Firmicutes	2.17983	39.5	-	FIXI01	51	2423	2178	2/10/16	3/5/17	Contig	SC	SAMEA971443	GCA_900053655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/655/GCA_900053655.1_4995_6_5	-	B10366
Escherichia coli C743_03	1126918	PRJNA79295	79295	Proteobacteria	Gammaproteobacteria	4.97073	50.5	-	AIBN01	385	5295	4934	8/13/13	2/25/17	Contig	IGS	SAMN02435991	GCA_000446805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/805/GCA_000446805.2_ASM44680v2	-	C743_03
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35075	65.6	-	MMOK01	5	4238	4076	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918776	GCA_001848815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/815/GCA_001848815.1_ASM184881v1	-	00-R0308
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.83856	52.1	-	JYRX01	83	4955	4734	12/21/15	3/1/17	Contig	FDA	SAMN02911975	GCA_001474755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/755/GCA_001474755.1_Salmonella_enterica_CVM_43806_v1.0	-	CVM 43806
Staphylococcus aureus H56219	1417164	PRJNA226918	226918	Terrabacteria group	Firmicutes	2.94007	32.7	-	JEST01	13	3116	2952	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398856	GCA_000579515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/515/GCA_000579515.1_Stap_aure_H56219_V1	-	H56219
Staphylococcus aureus H56227	1417165	PRJNA226919	226919	Terrabacteria group	Firmicutes	2.89074	32.6	-	JESU01	20	3033	2859	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398857	GCA_000579535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/535/GCA_000579535.1_Stap_aure_H56227_V1	-	H56227
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.6231	52.3	-	JYRZ01	67	4685	4442	12/21/15	3/1/17	Contig	FDA	SAMN02911977	GCA_001474775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/775/GCA_001474775.1_Salmonella_enterica_CVM_43808_v1.0	-	CVM 43808
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38729	65.6	-	MMOI01	6	4258	4093	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918778	GCA_001848845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/845/GCA_001848845.1_ASM184884v1	-	99-R862
Escherichia coli C751_03	1126919	PRJNA79297	79297	Proteobacteria	Gammaproteobacteria	4.92931	50.6	-	AIBO01	413	5312	4890	8/13/13	2/25/17	Contig	IGS	SAMN02435942	GCA_000446825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/825/GCA_000446825.2_ASM44682v2	-	C751_03
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07483	39.6	-	FIAR01	30	2275	2032	2/10/16	3/13/17	Contig	SC	SAMEA2156016	GCA_900053775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/775/GCA_900053775.1_10678_7_54	-	2690STDY5561782
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.47658	66.4	-	LLOS01	90	6165	5990	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128579	GCA_001451105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/105/GCA_001451105.1_WH-SGI-V-07405	26604259	WH-SGI-V-07405
Acinetobacter baumannii	470	PRJNA384060	384060	Proteobacteria	Gammaproteobacteria	4.84433	39.1	-	NGCH01	1844	5874	5683	5/15/17	5/15/17	Contig	JCVI	SAMN06837796	GCA_002136865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/865/GCA_002136865.1_ASM213686v1	-	PR354
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.27348	57.6	-	FLVL01	35	5279	5047	7/16/16	2/21/17	Scaffold	SC	SAMEA3531876	GCA_900093155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/155/GCA_900093155.1_18090_6_75	-	W2-1-ERG5
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.6667	57.1	-	FLXC01	47	5729	5423	7/16/16	2/21/17	Scaffold	SC	SAMEA3531831	GCA_900093165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/165/GCA_900093165.1_18090_8_54	-	PB295
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.3262	39.5	-	LXUC01	816	3490	2916	6/30/17	6/30/17	Contig	Umm Al-Qura University	SAMN04924809	GCA_002212205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/205/GCA_002212205.1_ASM221220v1	-	ABNH3
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.78893	66.1	-	LLPB01	81	6527	6340	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128588	GCA_001451205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/205/GCA_001451205.1_WH-SGI-V-07414	26604259	WH-SGI-V-07414
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07627	39.6	-	FIEU01	40	2274	2031	2/10/16	3/15/17	Contig	SC	SAMEA2154429	GCA_900053785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/785/GCA_900053785.1_10702_5_84	-	2690STDY5561741
Escherichia coli C78_09C	1126921	PRJNA79301	79301	Proteobacteria	Gammaproteobacteria	4.69176	50.6	-	AIBP01	190	4886	4598	8/13/13	2/25/17	Contig	IGS	SAMN02435992	GCA_000446845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/845/GCA_000446845.2_ASM44684v2	-	C78_09C
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38952	65.6	-	MMOJ01	8	4275	4075	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918777	GCA_001848855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/855/GCA_001848855.1_ASM184885v1	-	00-R0434
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.93119	52.1	-	JYSA01	95	5087	4829	12/21/15	3/1/17	Contig	FDA	SAMN02911978	GCA_001474805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/805/GCA_001474805.1_Salmonella_enterica_CVM_43809_v1.0	-	CVM 43809
Staphylococcus aureus H59298	1417166	PRJNA226920	226920	Terrabacteria group	Firmicutes	2.9014	32.7	-	JESV01	11	3071	2906	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398858	GCA_000579555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/555/GCA_000579555.1_Stap_aure_H59298_V1	-	H59298
Staphylococcus aureus H65794	1417170	PRJNA226924	226924	Terrabacteria group	Firmicutes	2.91931	32.6	-	JESW01	26	3067	2915	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398862	GCA_000579575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/575/GCA_000579575.1_Stap_aure_H65794_V1	-	H65794
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.11054	52.1	-	JYSB01	172	5327	5052	12/21/15	3/1/17	Contig	FDA	SAMN02911979	GCA_001474825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/825/GCA_001474825.1_Salmonella_enterica_CVM_43810_v1.0	-	CVM 43810
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40344	65.6	-	MMOH01	7	4272	4119	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918779	GCA_001848885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/885/GCA_001848885.1_ASM184888v1	-	00-R1405
Escherichia coli C79_08	1126922	PRJNA79303	79303	Proteobacteria	Gammaproteobacteria	4.78738	50.5	-	AIBQ01	406	4929	4642	8/13/13	2/25/17	Contig	IGS	SAMN02435993	GCA_000446865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/865/GCA_000446865.2_ASM44686v2	-	C79_08
Streptococcus pneumoniae	1313	PRJEB2098	203734	Terrabacteria group	Firmicutes	2.11737	39.5	-	FIWH01	68	2373	2097	2/10/16	3/13/17	Contig	SC	SAMEA807331	GCA_900053855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/855/GCA_900053855.1_4948_1_2	-	B13048
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.40916	66.4	-	LLOZ01	53	6137	5980	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128586	GCA_001451355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/355/GCA_001451355.1_WH-SGI-V-07412	26604259	WH-SGI-V-07412
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.32218	38.9	-	LYNY01	513	3378	3002	6/30/17	6/30/17	Contig	Umm Al-Qura University	SAMN04924804	GCA_002212395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/395/GCA_002212395.1_ASM221239v1	-	AB595
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.63637	57.1	-	FLWX01	52	5687	5389	7/16/16	2/21/17	Scaffold	SC	SAMEA3531880	GCA_900093175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/175/GCA_900093175.1_18090_8_77	-	W2-5-ERG5
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.82031	57	-	FLVM01	65	5856	5516	7/16/16	2/22/17	Scaffold	SC	SAMEA3531861	GCA_900093185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/185/GCA_900093185.1_18090_8_64	-	PB502
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.14081	38.5	-	LYNJ01	509	3280	2800	6/30/17	6/30/17	Contig	Umm Al-Qura University	SAMN04924784	GCA_002212475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/475/GCA_002212475.1_ASM221247v1	-	AB314
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.86021	66	-	LLPE01	146	6527	6325	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128591	GCA_001451375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/375/GCA_001451375.1_WH-SGI-V-07417	26604259	WH-SGI-V-07417
Streptococcus pneumoniae	1313	PRJEB2110	203866	Terrabacteria group	Firmicutes	2.10756	39.6	-	FIYD01	75	2340	2118	2/10/16	3/13/17	Contig	SC	SAMEA971404	GCA_900053885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/885/GCA_900053885.1_4995_7_5	-	B16242
Escherichia coli C792_92	1126923	PRJNA79305	79305	Proteobacteria	Gammaproteobacteria	5.31945	50.5	-	AIBR01	505	5773	5322	8/13/13	2/25/17	Contig	IGS	SAMN02435911	GCA_000446885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/885/GCA_000446885.2_ASM44688v2	-	C792_92
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41006	65.6	-	MMOG01	25	4292	4130	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918780	GCA_001848905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/905/GCA_001848905.1_ASM184890v1	-	00-R1156
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.85158	52.1	-	JYSE01	72	4976	4731	12/21/15	3/1/17	Contig	FDA	SAMN02911982	GCA_001474835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/835/GCA_001474835.1_Salmonella_enterica_CVM_43813_v1.0	-	CVM 43813
Staphylococcus aureus H75423	1417175	PRJNA226929	226929	Terrabacteria group	Firmicutes	2.93398	32.7	-	JESX01	18	3114	2958	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398867	GCA_000579595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/595/GCA_000579595.1_Stap_aure_H75423_V1	-	H75423
Staphylococcus aureus H75425	1417176	PRJNA226930	226930	Terrabacteria group	Firmicutes	2.93812	32.7	-	JESY01	13	3117	2959	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398868	GCA_000579615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/615/GCA_000579615.1_Stap_aure_H75425_V1	-	H75425
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.07904	52.1	-	JYSI01	83	5266	5018	12/21/15	3/1/17	Contig	FDA	SAMN02911986	GCA_001474845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/845/GCA_001474845.1_Salmonella_enterica_CVM_43817_v1.0	-	CVM 43817
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39073	65.6	-	MMJH01	5	4270	4104	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916420	GCA_001848925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/925/GCA_001848925.1_ASM184892v1	-	99-R216
Escherichia coli C796_10	1126924	PRJNA79307	79307	Proteobacteria	Gammaproteobacteria	4.6211	50.8	-	AIBS01	120	4822	4514	8/13/13	2/25/17	Contig	IGS	SAMN02435943	GCA_000446905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/905/GCA_000446905.2_ASM44690v2	-	C796_10
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.11411	39.5	-	FIYT01	56	2317	2084	2/10/16	3/13/17	Contig	SC	SAMEA1033573	GCA_900053915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/915/GCA_900053915.1_7004_3_8	-	B10199
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.01318	65.9	-	LLPG01	44	6832	6648	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128593	GCA_001451405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/405/GCA_001451405.1_WH-SGI-V-07419	26604259	WH-SGI-V-07419
Acinetobacter baumannii	470	PRJNA320195	320195	Proteobacteria	Gammaproteobacteria	3.24395	40	-	LYOE01	886	3314	2876	6/30/17	6/30/17	Contig	Umm Al-Qura University	SAMN04924811	GCA_002212545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/545/GCA_002212545.1_ASM221254v1	-	ABNH6
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.88668	57.2	-	FLXG01	101	6080	5674	7/16/16	2/21/17	Scaffold	SC	SAMEA3531848	GCA_900093195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/195/GCA_900093195.1_18090_8_58	-	PB463
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.5171	57.2	-	FLWC01	54	5608	5350	7/16/16	2/21/17	Scaffold	SC	SAMEA3531800	GCA_900093215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/215/GCA_900093215.1_18090_8_44	-	PB122
Acinetobacter baumannii	470	PRJNA306911	306911	Proteobacteria	Gammaproteobacteria	4.16746	39	-	LQAR01	23	-	-	1/15/16	4/5/16	Scaffold	CSIR - Indian Institute of Toxicology Research	SAMN04366600	GCA_001516805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/805/GCA_001516805.1_ASM151680v1	26941147	IITR88
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.87412	66	-	LLPI01	135	6643	6376	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128595	GCA_001451425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/425/GCA_001451425.1_WH-SGI-V-07421	26604259	WH-SGI-V-07421
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07576	39.6	-	FHXR01	28	2271	2035	2/10/16	3/13/17	Contig	SC	SAMEA2146305	GCA_900054065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/065/GCA_900054065.1_10678_6_49	-	2690STDY5561847
Escherichia coli C799_92	1126925	PRJNA79309	79309	Proteobacteria	Gammaproteobacteria	5.60243	50.4	-	AIBT01	482	6099	5617	8/13/13	2/25/17	Contig	IGS	SAMN02435965	GCA_000446925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/925/GCA_000446925.2_ASM44692v2	-	C799_92
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38451	65.6	-	MMJF01	6	4270	4090	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916422	GCA_001848935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/935/GCA_001848935.1_ASM184893v1	-	00-R0025
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.97002	52.1	-	JYSJ01	55	5142	4914	12/21/15	3/1/17	Contig	FDA	SAMN02911987	GCA_001474885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/885/GCA_001474885.1_Salmonella_enterica_CVM_43818_v1.0	-	CVM 43818
Staphylococcus aureus M49501	1417177	PRJNA226931	226931	Terrabacteria group	Firmicutes	2.94886	32.7	-	JESZ01	27	3136	2978	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398869	GCA_000579635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/635/GCA_000579635.1_Stap_aure_M49501_V1	-	M49501
Staphylococcus aureus M55878	1417179	PRJNA226933	226933	Terrabacteria group	Firmicutes	2.92486	32.7	-	JETA01	12	3111	2955	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398871	GCA_000579655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/655/GCA_000579655.1_Stap_aure_M55878_V1	-	M55878
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.88131	52.1	-	JYSP01	116	4994	4711	12/21/15	3/1/17	Contig	FDA	SAMN02911993	GCA_001474905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/905/GCA_001474905.1_Salmonella_enterica_CVM_43824_v1.0	-	CVM 43824
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39917	65.6	-	MMIZ01	21	4275	4111	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916428	GCA_001848965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/965/GCA_001848965.1_ASM184896v1	-	02-R0885
Escherichia coli C80_08	1126926	PRJNA79311	79311	Proteobacteria	Gammaproteobacteria	4.90392	50.5	-	AIBU01	283	5152	4747	8/13/13	2/25/17	Contig	IGS	SAMN02435912	GCA_000446945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/945/GCA_000446945.2_ASM44694v2	-	C80_08
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07639	39.6	-	FHXT01	35	2275	2030	2/10/16	3/15/17	Contig	SC	SAMEA2151986	GCA_900054075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/075/GCA_900054075.1_10678_6_51	-	2690STDY5561918
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.95685	65.9	-	LLPN01	143	6647	6386	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128600	GCA_001451505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/505/GCA_001451505.1_WH-SGI-V-07426	26604259	WH-SGI-V-07426
Acinetobacter baumannii	470	PRJNA307163	307163	Proteobacteria	Gammaproteobacteria	4.00711	39	-	LQBT01	97	3824	2794	1/25/16	4/6/16	Scaffold	Sri Sathya Sai Institute of Higher Learning	SAMN04376893	GCA_001535665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/665/GCA_001535665.1_ASM153566v1	27013044	AB28
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.38259	57.3	-	FLXB01	48	5404	5172	7/16/16	2/21/17	Scaffold	SC	SAMEA3531820	GCA_900093235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/235/GCA_900093235.1_18090_8_50	-	PB242
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.42953	57.3	-	FLVN01	40	5436	5185	7/16/16	2/21/17	Scaffold	SC	SAMEA3531858	GCA_900093245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/245/GCA_900093245.1_18090_8_63	-	PB497
Acinetobacter baumannii	470	PRJNA307224	307224	Proteobacteria	Gammaproteobacteria	4.0072	38.9	-	LQBV01	88	3833	2579	1/25/16	4/6/16	Scaffold	Sri Sathya Sai Institute of Higher Learning	SAMN04376925	GCA_001535685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/685/GCA_001535685.1_ASM153568v1	27013044	Ab30
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.28127	66.6	-	LLPP01	52	5962	5808	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128602	GCA_001451525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/525/GCA_001451525.1_WH-SGI-V-07491	26604259	WH-SGI-V-07428
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07527	39.6	-	FHYV01	30	2281	2031	2/10/16	3/13/17	Contig	SC	SAMEA1970344	GCA_900054085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/085/GCA_900054085.1_10678_7_1	-	2690STDY5561732
Escherichia coli C807_09	1126927	PRJNA79313	79313	Proteobacteria	Gammaproteobacteria	4.9594	50.7	-	AIBV01	344	5270	4925	8/13/13	2/25/17	Contig	IGS	SAMN02435994	GCA_000446965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/965/GCA_000446965.2_ASM44696v2	-	C807_09
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38681	65.6	-	MMJD01	33	4274	4101	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916424	GCA_001848975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/975/GCA_001848975.1_ASM184897v1	-	01-R0239
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.97305	52.1	-	JYSM01	108	5151	4880	12/21/15	3/1/17	Contig	FDA	SAMN02911990	GCA_001474915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/915/GCA_001474915.1_Salmonella_enterica_CVM_43821_v1.0	-	CVM 43821
Staphylococcus aureus M55890	1417180	PRJNA226934	226934	Terrabacteria group	Firmicutes	2.76862	32.7	-	JETB01	31	2868	2706	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398872	GCA_000579675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/675/GCA_000579675.1_Stap_aure_M55890_V1	-	M55890
Staphylococcus aureus M55902	1417181	PRJNA226935	226935	Terrabacteria group	Firmicutes	2.88575	32.7	-	JETC01	14	3047	2885	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398873	GCA_000579695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/695/GCA_000579695.1_Stap_aure_M55902_V1	-	M55902
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.78832	52.2	-	JYSQ01	58	4871	4645	12/21/15	3/1/17	Contig	FDA	SAMN02911994	GCA_001474925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/925/GCA_001474925.1_Salmonella_enterica_CVM_43825_v1.0	-	CVM 43825
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3878	65.6	-	MMKT01	10	4269	4098	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916382	GCA_001849015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/015/GCA_001849015.1_ASM184901v1	-	02-R0880
Escherichia coli C82_11	1126928	PRJNA79315	79315	Proteobacteria	Gammaproteobacteria	5.06049	50.6	-	AIBW01	488	5375	5008	8/13/13	2/25/17	Contig	IGS	SAMN02435966	GCA_000446985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/446/985/GCA_000446985.2_ASM44698v2	-	C82_11
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07635	39.6	-	FIER01	31	2274	2032	2/10/16	3/15/17	Contig	SC	SAMEA2161928	GCA_900054095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/095/GCA_900054095.1_10702_5_82	-	2690STDY5561802
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.8327	66	-	LLPS01	160	6627	6377	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128605	GCA_001451605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/605/GCA_001451605.1_WH-SGI-V-07486	26604259	WH-SGI-V-07486
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	3.36241	39	-	LYGE01	119	3226	3120	11/2/16	11/2/16	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745524	GCA_001862925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/862/925/GCA_001862925.1_ASM186292v1	-	XH794
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.63209	57.1	-	FLWS01	62	5677	5389	7/16/16	2/21/17	Scaffold	SC	SAMEA3531872	GCA_900093255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/255/GCA_900093255.1_18090_8_70	-	W1-4-ERY6(G)
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.55778	57.3	-	FLVU01	27	5529	5283	7/16/16	2/21/17	Scaffold	SC	SAMEA3531808	GCA_900093265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/265/GCA_900093265.1_18090_8_47	-	PB157
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.76499	39.9	-	LYFN01	2435	3849	3730	11/2/16	11/2/16	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745541	GCA_001863195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/863/195/GCA_001863195.1_ASM186319v1	-	XH824
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	5.9665	66.4	-	LLPU01	116	5702	5482	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128607	GCA_001451645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/645/GCA_001451645.1_WH-SGI-V-07488	26604259	WH-SGI-V-07488
Streptococcus pneumoniae	1313	PRJEB2110	203866	Terrabacteria group	Firmicutes	2.16869	39.5	-	FIYB01	59	2417	2170	2/10/16	3/6/17	Contig	SC	SAMEA971466	GCA_900054145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/145/GCA_900054145.1_4995_7_10	-	C12495
Escherichia coli C824_10	1126929	PRJNA79317	79317	Proteobacteria	Gammaproteobacteria	5.00924	50.5	-	AIBX01	301	5381	4991	8/13/13	2/25/17	Contig	IGS	SAMN02435995	GCA_000447005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/005/GCA_000447005.2_ASM44700v2	-	C824_10
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38386	65.6	-	MMKQ01	11	4258	4092	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916385	GCA_001849045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/045/GCA_001849045.1_ASM184904v1	-	00-R1158
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.74261	52	-	JYSS01	161	4901	4607	12/21/15	3/1/17	Contig	FDA	SAMN02911996	GCA_001474965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/965/GCA_001474965.1_Salmonella_enterica_CVM_43827_v1.0	-	CVM 43827
Staphylococcus aureus M59248	1417182	PRJNA226936	226936	Terrabacteria group	Firmicutes	2.89457	32.7	-	JETD01	20	3054	2889	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398874	GCA_000579715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/715/GCA_000579715.1_Stap_aure_M59248_V1	-	M59248
Staphylococcus aureus M59255	1417183	PRJNA226937	226937	Terrabacteria group	Firmicutes	2.84422	32.8	-	JETE01	52	2994	2826	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398875	GCA_000579735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/735/GCA_000579735.1_Stap_aure_M59255_V1	-	M59255
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.93206	51.9	-	JYSU01	63	5047	4800	12/21/15	3/1/17	Contig	FDA	SAMN02911998	GCA_001474985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/985/GCA_001474985.1_Salmonella_enterica_CVM_43829_v1.0	-	CVM 43829
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38485	65.6	-	MMKP01	10	4259	4089	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916386	GCA_001849095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/095/GCA_001849095.1_ASM184909v1	-	01-R0878
Escherichia coli C842_97	1126931	PRJNA79321	79321	Proteobacteria	Gammaproteobacteria	5.21864	50.4	-	AIBY01	297	5532	5135	8/13/13	2/25/17	Contig	IGS	SAMN02435996	GCA_000447025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/025/GCA_000447025.2_ASM44702v2	-	C842_97
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07473	39.6	-	FHYU01	33	2280	2029	2/10/16	3/12/17	Contig	SC	SAMEA2161644	GCA_900054245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/245/GCA_900054245.1_10678_7_10	-	2690STDY5561730
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.54526	66.3	-	LLPV01	75	6235	6039	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128608	GCA_001451655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/655/GCA_001451655.1_WH-SGI-V-07489	26604259	WH-SGI-V-07489
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	4.70709	38.7	-	LYKB01	869	4468	4059	11/2/16	11/2/16	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745423	GCA_001864275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/275/GCA_001864275.1_ASM186427v1	-	XH662
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.38664	57.3	-	FLVK01	35	5367	5152	7/16/16	2/21/17	Scaffold	SC	SAMEA3531878	GCA_900093275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/275/GCA_900093275.1_18090_8_75	-	W2-4-ERG4
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.62453	57	-	FLXI01	27	5631	5354	7/16/16	2/21/17	Scaffold	SC	SAMEA3531882	GCA_900093285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/285/GCA_900093285.1_18090_8_79	-	W2-5-ERG7
Acinetobacter baumannii	470	PRJNA314151	314151	Proteobacteria	Gammaproteobacteria	6.37092	38.3	-	LYIX01	2791	5702	5081	11/2/16	11/2/16	Scaffold	"Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University"	SAMN04745453	GCA_001864735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/864/735/GCA_001864735.1_ASM186473v1	-	XH694
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.52598	66.3	-	LLPX01	53	6180	6003	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128610	GCA_001451705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/705/GCA_001451705.1_WH-SGI-V-07491	26604259	WH-SGI-V-07491
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07371	39.6	-	FIAD01	37	2260	2030	2/10/16	3/13/17	Contig	SC	SAMEA2148027	GCA_900054255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/255/GCA_900054255.1_10678_7_41	-	2690STDY5561753
Escherichia coli C87_11	1126933	PRJNA79325	79325	Proteobacteria	Gammaproteobacteria	5.16488	50.4	-	AICA01	460	5544	5141	8/13/13	2/25/17	Contig	IGS	SAMN02435997	GCA_000447045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/045/GCA_000447045.2_ASM44704v2	-	C87_11
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3951	65.6	-	MMJL01	14	4267	4104	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916416	GCA_001849125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/125/GCA_001849125.1_ASM184912v1	-	02-R1287
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.70149	52.1	-	JYSV01	49	4772	4536	12/21/15	3/1/17	Contig	FDA	SAMN02911999	GCA_001474995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/474/995/GCA_001474995.1_Salmonella_enterica_CVM_43830_v1.0	-	CVM 43830
Staphylococcus aureus M59257	1417184	PRJNA226938	226938	Terrabacteria group	Firmicutes	2.84661	32.7	-	JETF01	20	2991	2821	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398876	GCA_000579755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/755/GCA_000579755.1_Stap_aure_M59257_V1	-	M59257
Staphylococcus aureus M70006	1417187	PRJNA226941	226941	Terrabacteria group	Firmicutes	2.84556	32.8	-	JETG01	15	2992	2834	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398879	GCA_000579775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/775/GCA_000579775.1_Stap_aure_M70006_V1	-	M70006
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.5968	52.2	-	JYSW01	41	4656	4413	12/21/15	3/1/17	Contig	FDA	SAMN02912000	GCA_001475005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/005/GCA_001475005.1_Salmonella_enterica_CVM_43831_v1.0	-	CVM 43831
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39404	65.6	-	MMJP01	6	4275	4105	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916412	GCA_001849145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/145/GCA_001849145.1_ASM184914v1	-	06-05801
Escherichia coli C887_10	1126934	PRJNA79327	79327	Proteobacteria	Gammaproteobacteria	4.99514	50.7	-	AICB01	193	5236	4911	8/13/13	2/25/17	Contig	IGS	SAMN02435967	GCA_000447065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/065/GCA_000447065.2_ASM44706v2	-	C887_10
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07716	39.6	-	FIBV01	36	2280	2031	2/10/16	3/6/17	Contig	SC	SAMEA2145996	GCA_900054265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/265/GCA_900054265.1_10678_7_83	-	2690STDY5561751
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.73353	66	-	LLPZ01	114	6530	6314	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128612	GCA_001451725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/725/GCA_001451725.1_WH-SGI-V-07493	26604259	WH-SGI-V-07493
Acinetobacter baumannii	470	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.43841	38	-	DCLV01	271	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06456994	GCA_002321775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/321/775/GCA_002321775.1_ASM232177v1	28894102	-
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.41167	57.4	-	FLXJ01	38	5434	5204	7/16/16	2/21/17	Scaffold	SC	SAMEA3531883	GCA_900093295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/295/GCA_900093295.1_18090_8_80	-	W2-5-ERG8
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.78548	57.4	-	FLXL01	124	5849	5408	7/16/16	2/21/17	Scaffold	SC	SAMEA3531884	GCA_900093305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/305/GCA_900093305.1_18090_8_81	-	W2-9-ERG1
Acinetobacter baumannii	470	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.93202	38.7	-	DDAN01	214	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452163	GCA_002332605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/605/GCA_002332605.1_ASM233260v1	28894102	-
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.36771	66.1	-	LLQA01	137	6103	5850	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128613	GCA_001451745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/745/GCA_001451745.1_WH-SGI-V-07494	26604259	WH-SGI-V-07494
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07693	39.6	-	FICF01	31	2276	2033	2/10/16	3/13/17	Contig	SC	SAMEA1967149	GCA_900054275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/275/GCA_900054275.1_10702_5_17	-	2690STDY5561674
Escherichia coli C900_01	1126935	PRJNA79329	79329	Proteobacteria	Gammaproteobacteria	5.14126	50.6	-	AICC01	392	5516	5128	8/13/13	2/25/17	Contig	IGS	SAMN02435998	GCA_000447085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/085/GCA_000447085.2_ASM44708v2	-	C900_01
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37226	65.6	-	MMJC01	3	4264	4100	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916425	GCA_001849165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/165/GCA_001849165.1_ASM184916v1	-	01-R0411
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.92044	52.1	-	JYSY01	74	5067	4815	12/21/15	3/1/17	Contig	FDA	SAMN02912002	GCA_001475045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/045/GCA_001475045.1_Salmonella_enterica_CVM_43833_v1.0	-	CVM 43833
Staphylococcus aureus M70013	1417188	PRJNA226942	226942	Terrabacteria group	Firmicutes	2.85611	32.8	-	JETH01	36	2970	2830	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398880	GCA_000579795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/795/GCA_000579795.1_Stap_aure_M70013_V1	-	M70013
Staphylococcus aureus T15889	1417191	PRJNA226945	226945	Terrabacteria group	Firmicutes	2.75081	32.8	-	JETI01	26	2831	2694	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398883	GCA_000579815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/815/GCA_000579815.1_Stap_aure_T15889_V1	-	T15889
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.1256	52	-	JYTD01	117	5318	5063	12/21/15	3/1/17	Contig	FDA	SAMN02912007	GCA_001475065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/065/GCA_001475065.1_Salmonella_enterica_CVM_43838_v1.0	-	CVM 43838
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37812	65.6	-	MMIU01	2	4238	4078	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916433	GCA_001849175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/175/GCA_001849175.1_ASM184917v1	-	00-R1097
Escherichia coli C93_11	1126936	PRJNA79331	79331	Proteobacteria	Gammaproteobacteria	4.88452	50.6	-	AICD01	270	5217	4830	8/13/13	2/25/17	Contig	IGS	SAMN02435914	GCA_000447105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/105/GCA_000447105.2_ASM44710v2	-	C93_11
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.01852	39.6	-	FIXD01	31	2214	2002	2/10/16	3/13/17	Contig	SC	SAMEA1033637	GCA_900054375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/375/GCA_900054375.1_6972_8_39	-	A32497
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.19285	65.8	-	LLQB01	66	7041	6830	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128614	GCA_001451755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/755/GCA_001451755.1_WH-SGI-V-07495	26604259	WH-SGI-V-07495
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.38506	57.4	-	FLXK01	33	5334	5092	7/16/16	2/21/17	Scaffold	SC	SAMEA3531885	GCA_900093315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/315/GCA_900093315.1_18090_8_82	-	W2-9-ERG2
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.26757	57.5	-	FLXM01	29	5284	5069	7/16/16	2/21/17	Scaffold	SC	SAMEA3531887	GCA_900093325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/325/GCA_900093325.1_18090_8_83	-	W2-9-ERG10
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.59988	66.1	-	LLQE01	91	6306	6108	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128617	GCA_001451815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/815/GCA_001451815.1_WH-SGI-V-07498	26604259	WH-SGI-V-07498
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07463	39.6	-	FIDG01	35	2275	2030	2/10/16	3/13/17	Contig	SC	SAMEA2163143	GCA_900054525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/525/GCA_900054525.1_10702_5_43	-	2690STDY5561707
Escherichia coli C9_92	1126937	PRJNA79333	79333	Proteobacteria	Gammaproteobacteria	4.71365	50.7	-	AICE01	93	4891	4618	8/13/13	2/25/17	Contig	IGS	SAMN02435968	GCA_000447125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/125/GCA_000447125.2_ASM44712v2	-	C9_92
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40141	65.6	-	MMIR01	11	4285	4119	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916436	GCA_001849215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/215/GCA_001849215.1_ASM184921v1	-	02-R0848
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.72061	52.1	-	JYSZ01	89	4753	4511	12/21/15	3/1/17	Contig	FDA	SAMN02912003	GCA_001475075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/075/GCA_001475075.1_Salmonella_enterica_CVM_43834_v1.0	-	CVM 43834
Staphylococcus aureus T22051	1417194	PRJNA226948	226948	Terrabacteria group	Firmicutes	2.95176	32.7	-	JETJ01	49	3117	2946	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398886	GCA_000579835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/835/GCA_000579835.1_Stap_aure_T22051_V1	-	T22051
Staphylococcus aureus T22071_080712	1417195	PRJNA226949	226949	Terrabacteria group	Firmicutes	2.78458	32.8	-	JETK01	22	2908	2759	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398887	GCA_000579855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/855/GCA_000579855.1_Stap_aure_T22071_080712_V1	-	T22071_080712
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.97863	52.1	-	JYTF01	85	5174	4834	12/21/15	3/1/17	Contig	FDA	SAMN02912009	GCA_001475085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/085/GCA_001475085.1_Salmonella_enterica_CVM_43840_v1.0	-	CVM 43840
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38313	65.6	-	MMJM01	2	4266	4096	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916415	GCA_001849235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/235/GCA_001849235.1_ASM184923v1	-	99-R1224
Escherichia coli C170_11	1127124	PRJNA79021	79021	Proteobacteria	Gammaproteobacteria	5.01868	50.6	-	AIAJ01	459	5357	4993	8/13/13	2/25/17	Contig	University of Maryland School of Medicine	SAMN02436002	GCA_000447145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/447/145/GCA_000447145.2_ASM44714v2	-	C170_11
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07585	39.6	-	FHXU01	31	2267	2027	2/10/16	3/13/17	Contig	SC	SAMEA2153934	GCA_900054785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/785/GCA_900054785.1_10678_6_52	-	2690STDY5561897
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.45082	66.2	-	LLQG01	63	6239	6052	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128619	GCA_001451835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/835/GCA_001451835.1_WH-SGI-V-07500	26604259	WH-SGI-V-07500
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.61647	57	-	FLXN01	48	5646	5373	7/16/16	2/21/17	Scaffold	SC	SAMEA3531889	GCA_900093335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/335/GCA_900093335.1_18090_8_85	-	W2-11-ERG2
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.49657	57.4	-	FLXP01	43	5586	5330	7/16/16	2/21/17	Scaffold	SC	SAMEA3531890	GCA_900093345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/345/GCA_900093345.1_18090_8_86	-	W2-13-ERG1
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.82746	66	-	LLQK01	83	6557	6329	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128623	GCA_001451885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/885/GCA_001451885.1_WH-SGI-V-07504	26604259	WH-SGI-V-07504
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07752	39.6	-	FIDF01	29	2272	2035	2/10/16	3/13/17	Contig	SC	SAMEA2153629	GCA_900054795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/795/GCA_900054795.1_10702_5_41	-	2690STDY5561693
Escherichia coli B26-2	1151226	PRJNA86799	86799	Proteobacteria	Gammaproteobacteria	5.55456	50.4	-	AVQV01	57	5944	5440	8/29/13	2/25/17	Contig	IGS	SAMN01883258	GCA_000461915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/915/GCA_000461915.2_ASM46191v2	-	B26-2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34892	65.6	-	MMIW01	18	4247	4072	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916431	GCA_001849265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/265/GCA_001849265.1_ASM184926v1	-	98-R660
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.69532	52.2	-	JYTG01	68	4741	4505	12/21/15	3/1/17	Contig	FDA	SAMN02912010	GCA_001475105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/105/GCA_001475105.1_Salmonella_enterica_CVM_43841_v1.0	-	CVM 43841
Staphylococcus aureus T28640	1417197	PRJNA226951	226951	Terrabacteria group	Firmicutes	2.88081	32.7	-	JETL01	17	3038	2877	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398889	GCA_000579875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/875/GCA_000579875.1_Stap_aure_T28640_V1	-	T28640
Staphylococcus aureus T32070	1417200	PRJNA226954	226954	Terrabacteria group	Firmicutes	2.85789	32.7	-	JETM01	44	2991	2832	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398892	GCA_000579895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/895/GCA_000579895.1_Stap_aure_T32070_V1	-	T32070
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.80789	52	-	JYTJ01	95	4889	4645	12/21/15	3/1/17	Contig	FDA	SAMN02912013	GCA_001475145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/145/GCA_001475145.1_Salmonella_enterica_CVM_43844_v1.0	-	CVM 43844
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37005	65.6	-	MMJN01	9	4250	4085	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916414	GCA_001849285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/285/GCA_001849285.1_ASM184928v1	-	02-R1612
Escherichia coli 09BKT076207	1081889	PRJNA72907	72907	Proteobacteria	Gammaproteobacteria	5.49885	50.3	-	AVQR01	70	5950	5435	8/29/13	2/25/17	Contig	Institute for Genome Sciences	SAMN01883249	GCA_000461935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/935/GCA_000461935.2_ASM46193v2	-	09BKT076207
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07617	39.6	-	FIDK01	35	2282	2026	2/10/16	3/13/17	Contig	SC	SAMEA2147603	GCA_900054805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/805/GCA_900054805.1_10702_5_45	-	2690STDY5561676
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.99215	65.8	-	LLQO01	212	6666	6385	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128627	GCA_001451905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/905/GCA_001451905.1_WH-SGI-V-07508	26604259	WH-SGI-V-07508
Acinetobacter baumannii	470	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.75425	38.9	-	DGJK01	97	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452780	GCA_002386695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/695/GCA_002386695.1_ASM238669v1	28894102	-
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.49554	57.4	-	FLXO01	41	5582	5335	7/16/16	2/21/17	Scaffold	SC	SAMEA3531891	GCA_900093355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/355/GCA_900093355.1_18090_8_87	-	W2-13-ERG2
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.28053	57.9	-	FLXQ01	25	5263	5005	7/16/16	2/21/17	Scaffold	SC	SAMEA3531892	GCA_900093365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/365/GCA_900093365.1_18090_6_76	-	W2-13-ERG3
Acinetobacter baumannii	470	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	3.53322	38.6	-	DGNX01	292	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06450661	GCA_002389145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/389/145/GCA_002389145.1_ASM238914v1	28894102	-
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.92921	66	-	LLQS01	82	6618	6423	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128631	GCA_001451975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/975/GCA_001451975.1_WH-SGI-V-07621	26604259	WH-SGI-V-07621
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.08341	39.6	-	FIUD01	67	2314	2080	2/10/16	3/5/17	Contig	SC	SAMEA1033885	GCA_900054885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/885/GCA_900054885.1_7004_3_13	-	B17224
Escherichia coli B102	1151213	PRJNA86773	86773	Proteobacteria	Gammaproteobacteria	5.26052	50.3	-	AVQS01	125	5570	5142	8/29/13	2/25/17	Contig	IGS	SAMN01883226	GCA_000461955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/955/GCA_000461955.2_ASM46195v2	-	B102
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38582	65.6	-	MMIT01	11	4262	4094	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916434	GCA_001849325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/325/GCA_001849325.1_ASM184932v1	-	01-R1393
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.8472	52.3	-	JYTK01	67	4949	4719	12/21/15	3/1/17	Contig	FDA	SAMN02912014	GCA_001475165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/165/GCA_001475165.1_Salmonella_enterica_CVM_43845_v1.0	-	CVM 43845
Staphylococcus aureus T36111	1417205	PRJNA226959	226959	Terrabacteria group	Firmicutes	2.85991	32.8	-	JETN01	1	3003	2845	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398897	GCA_000579915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/915/GCA_000579915.1_Stap_aure_T36111_V1	-	T36111
Staphylococcus aureus T39093	1417208	PRJNA226962	226962	Terrabacteria group	Firmicutes	2.89659	32.7	-	JETO01	19	3059	2895	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398900	GCA_000579935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/935/GCA_000579935.1_Stap_aure_T39093_V1	-	T39093
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.02141	52.2	-	JYTL01	79	5203	4949	12/21/15	3/1/17	Contig	FDA	SAMN02912015	GCA_001475175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/175/GCA_001475175.1_Salmonella_enterica_CVM_43846_v1.0	-	CVM 43846
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38274	65.6	-	MMJO01	11	4254	4086	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916413	GCA_001849345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/345/GCA_001849345.1_ASM184934v1	-	01-R1619
Escherichia coli B29-1	1151219	PRJNA86785	86785	Proteobacteria	Gammaproteobacteria	5.21563	50.3	-	AVQY01	121	5523	5112	8/29/13	2/25/17	Contig	IGS	SAMN01883229	GCA_000461975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/975/GCA_000461975.2_ASM46197v2	-	B29-1
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.13379	39.4	-	FIWT01	28	2365	2120	2/10/16	3/6/17	Contig	SC	SAMEA1033801	GCA_900054905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/905/GCA_900054905.1_6972_8_37	-	A31918
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.7497	65.9	-	LLQT01	166	6580	6320	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128632	GCA_001451985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/451/985/GCA_001451985.1_WH-SGI-V-07622	26604259	WH-SGI-V-07622
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.27845	57.9	-	FLXR01	19	5261	5003	7/16/16	2/21/17	Scaffold	SC	SAMEA3531893	GCA_900093375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/375/GCA_900093375.1_18090_6_77	-	W2-13-ERG4
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.49346	57.4	-	FLXS01	39	5571	5330	7/16/16	2/21/17	Scaffold	SC	SAMEA3531894	GCA_900093385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/385/GCA_900093385.1_18090_8_88	-	W2-13-ERG5
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.80728	66	-	LLQX01	118	6535	6297	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128636	GCA_001452025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/025/GCA_001452025.1_WH-SGI-V-07626	26604259	WH-SGI-V-07626
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07576	39.6	-	FHXH01	31	2279	2032	2/10/16	3/13/17	Contig	SC	SAMEA2154880	GCA_900055035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/035/GCA_900055035.1_10678_6_37	-	2690STDY5561883
Escherichia coli B107	1151214	PRJNA86775	86775	Proteobacteria	Gammaproteobacteria	5.47921	50.4	-	AVQT01	52	5829	5357	8/29/13	2/25/17	Contig	IGS	SAMN01883250	GCA_000461995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/461/995/GCA_000461995.2_ASM46199v2	-	B107
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39602	65.6	-	MMIY01	12	4267	4103	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916429	GCA_001849385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/385/GCA_001849385.1_ASM184938v1	-	02-R1527
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91567	52.1	-	JYSC01	75	5064	4819	12/21/15	3/1/17	Contig	FDA	SAMN02911980	GCA_001475215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/215/GCA_001475215.1_Salmonella_enterica_CVM_43811_v1.0	-	CVM 43811
Staphylococcus aureus W15951	1417210	PRJNA226964	226964	Terrabacteria group	Firmicutes	2.92322	32.7	-	JETP01	12	3108	2937	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398902	GCA_000579955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/955/GCA_000579955.1_Stap_aure_W15951_V1	-	W15951
Staphylococcus aureus W73601	1417211	PRJNA226965	226965	Terrabacteria group	Firmicutes	2.76896	32.7	-	JETQ01	25	2849	2710	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398903	GCA_000579975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/975/GCA_000579975.1_Stap_aure_W73601_V1	-	W73601
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.96927	52.2	-	JYSL01	175	5155	4880	12/21/15	3/1/17	Contig	FDA	SAMN02911989	GCA_001475225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/225/GCA_001475225.1_Salmonella_enterica_CVM_43820_v1.0	-	CVM 43820
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39525	65.6	-	MMJI01	17	4279	4104	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916419	GCA_001849395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/395/GCA_001849395.1_ASM184939v1	-	99-R206
Escherichia coli B26-1	1151225	PRJNA86797	86797	Proteobacteria	Gammaproteobacteria	5.52877	50.4	-	AVQU01	59	5923	5425	8/29/13	2/25/17	Contig	IGS	SAMN01883257	GCA_000462025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/025/GCA_000462025.2_ASM46202v2	-	B26-1
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07735	39.6	-	FHYY01	31	2283	2028	2/10/16	3/6/17	Contig	SC	SAMEA2158668	GCA_900055045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/045/GCA_900055045.1_10678_7_13	-	2690STDY5561711
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.90942	66.1	-	LLQY01	93	6668	6447	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128637	GCA_001452045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/045/GCA_001452045.1_WH-SGI-V-07627	26604259	WH-SGI-V-07627
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.87563	57.3	-	FLXT01	155	6089	5623	7/16/16	2/21/17	Scaffold	SC	SAMEA3531896	GCA_900093395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/395/GCA_900093395.1_18090_6_78	-	W2-15-ERG3
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.84152	57.3	-	FLXU01	167	6073	5601	7/16/16	2/22/17	Scaffold	SC	SAMEA3531897	GCA_900093405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/405/GCA_900093405.1_18090_6_79	-	W2-15-ERG14
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.74791	66.1	-	LLQZ01	131	6471	6239	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128638	GCA_001452055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/055/GCA_001452055.1_WH-SGI-V-076137	26604259	WH-SGI-V-07628
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07729	39.6	-	FHZW01	35	2282	2030	2/10/16	3/13/17	Contig	SC	SAMEA2158764	GCA_900055055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/055/GCA_900055055.1_10678_7_35	-	2690STDY5561821
Escherichia coli B28-1	1151217	PRJNA86781	86781	Proteobacteria	Gammaproteobacteria	5.25999	50.3	-	AVQW01	116	5577	5152	8/29/13	2/25/17	Contig	IGS	SAMN01883227	GCA_000462045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/045/GCA_000462045.2_ASM46204v2	-	B28-1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38162	65.6	-	MMJK01	12	4253	4085	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916417	GCA_001849435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/435/GCA_001849435.1_ASM184943v1	-	04-R0766
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.5764	52.1	-	JYTA01	117	4665	4398	12/21/15	3/1/17	Contig	FDA	SAMN02912004	GCA_001475235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/235/GCA_001475235.1_Salmonella_enterica_CVM_43835_v1.0	-	CVM 43835
Staphylococcus aureus W73738	1417213	PRJNA226967	226967	Terrabacteria group	Firmicutes	2.77975	32.8	-	JETR01	45	2897	2702	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398905	GCA_000579995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/579/995/GCA_000579995.1_Stap_aure_W73738_V1	-	W73738
Staphylococcus aureus W76930	1417214	PRJNA226968	226968	Terrabacteria group	Firmicutes	2.88067	32.7	-	JETS01	12	3031	2866	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398906	GCA_000580015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/015/GCA_000580015.1_Stap_aure_W76930_V1	-	W76930
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.89655	52.2	-	JYRT01	131	5033	4784	12/21/15	3/1/17	Contig	FDA	SAMN02911971	GCA_001475245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/245/GCA_001475245.1_Salmonella_enterica_CVM_43802_v1.0	-	CVM 43802
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40184	65.6	-	MMIS01	20	4288	4102	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916435	GCA_001849465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/465/GCA_001849465.1_ASM184946v1	-	02-R0961
Escherichia coli B36-2	1151222	PRJNA86791	86791	Proteobacteria	Gammaproteobacteria	5.22794	50.2	-	AVRB01	113	5542	5120	8/29/13	2/25/17	Contig	IGS	SAMN01883232	GCA_000462065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/065/GCA_000462065.2_ASM46206v2	-	B36-2
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07611	39.6	-	FHZY01	41	2282	2030	2/10/16	3/13/17	Contig	SC	SAMEA2163628	GCA_900055065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/065/GCA_900055065.1_10678_7_38	-	2690STDY5561763
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.47252	66.4	-	LLRB01	63	6156	5998	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128640	GCA_001452075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/075/GCA_001452075.1_WH-SGI-V-07630	26604259	WH-SGI-V-07630
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.49203	57.4	-	FLXV01	43	5571	5327	7/16/16	2/21/17	Scaffold	SC	SAMEA3531898	GCA_900093415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/415/GCA_900093415.1_18090_8_89	-	W2-13-ERG7
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.49402	57.4	-	FLXW01	43	5572	5332	7/16/16	2/21/17	Scaffold	SC	SAMEA3531899	GCA_900093425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/425/GCA_900093425.1_18090_8_90	-	W2-13-ERG8
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.94258	66	-	LLRE01	138	6774	6491	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128643	GCA_001452105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/105/GCA_001452105.1_WH-SGI-V-07633	26604259	WH-SGI-V-07633
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07633	39.6	-	FHZZ01	35	2283	2032	2/10/16	3/13/17	Contig	SC	SAMEA2153339	GCA_900055075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/075/GCA_900055075.1_10678_7_37	-	2690STDY5561828
Escherichia coli B7-1	1151215	PRJNA86777	86777	Proteobacteria	Gammaproteobacteria	5.51409	50.4	-	AVRC01	52	5902	5388	8/29/13	2/25/17	Contig	IGS	SAMN01883252	GCA_000462085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/085/GCA_000462085.2_ASM46208v2	-	B7-1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39866	65.6	-	MMKN01	28	4290	4103	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916388	GCA_001849495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/495/GCA_001849495.1_ASM184949v1	-	02-R0760
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.68844	52.1	-	JYRR01	84	4808	4514	12/21/15	3/1/17	Contig	FDA	SAMN02911969	GCA_001475295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/295/GCA_001475295.1_Salmonella_enterica_CVM_43800_v1.0	-	CVM 43800
Staphylococcus aureus W76994_072512	1417215	PRJNA226969	226969	Terrabacteria group	Firmicutes	2.96485	32.7	-	JETT01	13	3153	2995	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398907	GCA_000580035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/035/GCA_000580035.1_Stap_aure_W76994_072512_V1	-	W76994_072512
Staphylococcus aureus W79968	1417216	PRJNA226970	226970	Terrabacteria group	Firmicutes	2.92356	32.7	-	JETU01	24	3126	2946	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398908	GCA_000580055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/055/GCA_000580055.1_Stap_aure_W79968_V1	-	W79968
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.14626	52.1	-	JYRW01	147	5339	5090	12/21/15	3/1/17	Contig	FDA	SAMN02911974	GCA_001475305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/305/GCA_001475305.1_Salmonella_enterica_CVM_43805_v1.0	-	CVM 43805
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39241	65.6	-	MMJB01	11	4265	4101	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916426	GCA_001849525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/525/GCA_001849525.1_ASM184952v1	-	99-R715
Escherichia coli B29-2	1151220	PRJNA86787	86787	Proteobacteria	Gammaproteobacteria	5.22473	50.3	-	AVQZ01	119	5552	5120	8/29/13	2/25/17	Contig	IGS	SAMN01883230	GCA_000462105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/105/GCA_000462105.2_ASM46210v2	-	B29-2
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07766	39.6	-	FICY01	31	2279	2037	2/10/16	3/12/17	Contig	SC	SAMEA2153227	GCA_900055095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/095/GCA_900055095.1_10702_5_36	-	2690STDY5561843
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.87029	66	-	LLRF01	156	6725	6423	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128644	GCA_001452125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/125/GCA_001452125.1_WH-SGI-V-07634	26604259	WH-SGI-V-07634
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.49314	57.4	-	FLXX01	46	5577	5333	7/16/16	2/21/17	Scaffold	SC	SAMEA3531900	GCA_900093435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/435/GCA_900093435.1_18090_8_91	-	W2-13-ERG11
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.43218	57.3	-	FLXZ01	41	5500	5211	7/16/16	2/21/17	Scaffold	SC	SAMEA3531901	GCA_900093445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/445/GCA_900093445.1_18090_8_92	-	F1-9-ERG1
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.71692	66.1	-	LLRG01	106	6455	6264	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128645	GCA_001452135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/135/GCA_001452135.1_WH-SGI-V-07635	26604259	WH-SGI-V-07635
Streptococcus pneumoniae	1313	PRJEB2102	203746	Terrabacteria group	Firmicutes	2.08078	39.6	-	FIUH01	60	2325	2062	2/10/16	3/13/17	Contig	SC	SAMEA685599	GCA_900055165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/165/GCA_900055165.1_4525_7_6	-	B10261
Escherichia coli B36-1	1151221	PRJNA86789	86789	Proteobacteria	Gammaproteobacteria	5.23177	50.2	-	AVRA01	112	5544	5108	8/29/13	2/25/17	Contig	IGS	SAMN01883231	GCA_000462125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/125/GCA_000462125.2_ASM46212v2	-	B36-1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39616	65.6	-	MMKM01	13	4280	4106	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916389	GCA_001849535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/535/GCA_001849535.1_ASM184953v1	-	01-R1394
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.0097	52.1	-	JYSG01	78	5158	4921	12/21/15	3/1/17	Contig	FDA	SAMN02911984	GCA_001475335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/335/GCA_001475335.1_Salmonella_enterica_CVM_43815_v1.0	-	CVM 43815
Staphylococcus aureus W83137	1417219	PRJNA226973	226973	Terrabacteria group	Firmicutes	2.84746	32.7	-	JETV01	53	2963	2813	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398911	GCA_000580075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/075/GCA_000580075.1_Stap_aure_W83137_V1	-	W83137
Staphylococcus aureus W83140	1417220	PRJNA226974	226974	Terrabacteria group	Firmicutes	2.83334	32.8	-	JETW01	44	2975	2806	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398912	GCA_000580095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/095/GCA_000580095.1_Stap_aure_W83140_V1	-	W83140
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.66515	52.2	-	JYSD01	41	4708	4499	12/21/15	3/1/17	Contig	FDA	SAMN02911981	GCA_001475345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/345/GCA_001475345.1_Salmonella_enterica_CVM_43812_v1.0	-	CVM 43812
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39822	65.6	-	MMKK01	19	4301	4121	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916391	GCA_001849565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/565/GCA_001849565.1_ASM184956v1	-	01-R1613
Escherichia coli T1282_01	1081891	PRJNA72911	72911	Proteobacteria	Gammaproteobacteria	5.26936	50.3	-	AVRM01	139	5599	5121	8/29/13	2/25/17	Contig	Institute for Genome Sciences	SAMN01919630	GCA_000462145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/145/GCA_000462145.2_ASM46214v2	-	T1282_01
Streptococcus pneumoniae	1313	PRJEB2102	203746	Terrabacteria group	Firmicutes	2.09724	39.6	-	FIUN01	25	2331	2091	2/10/16	3/15/17	Contig	SC	SAMEA685620	GCA_900055175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/175/GCA_900055175.1_4525_7_10	-	C14269
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.7736	66.2	-	LLRH01	94	6529	6334	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128646	GCA_001452155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/155/GCA_001452155.1_WH-SGI-V-07636	26604259	WH-SGI-V-07636
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.31289	57.5	-	FLYA01	29	5324	5115	7/16/16	2/21/17	Scaffold	SC	SAMEA3531902	GCA_900093455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/455/GCA_900093455.1_18090_8_93	-	F1-9-ERG2
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.52574	57.1	-	FLXY01	82	5616	5296	7/16/16	2/21/17	Scaffold	SC	SAMEA3531903	GCA_900093465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/465/GCA_900093465.1_18090_8_94	-	PB86
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.57614	66.3	-	LLRI01	89	6290	6078	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128647	GCA_001452185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/185/GCA_001452185.1_WH-SGI-V-07637	26604259	WH-SGI-V-07637
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07734	39.6	-	FHYB01	31	2268	2029	2/10/16	3/13/17	Contig	SC	SAMEA2145081	GCA_900055445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/445/GCA_900055445.1_10678_6_6	-	2690STDY5561679
Escherichia coli T924_01	1081893	PRJNA72915	72915	Proteobacteria	Gammaproteobacteria	5.24212	50.3	-	AVRP01	130	5573	5117	8/29/13	2/25/17	Contig	Institute for Genome Sciences	SAMN01919657	GCA_000462165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/165/GCA_000462165.2_ASM46216v2	-	T924_01
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38481	65.6	-	MMKL01	15	4272	4094	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916390	GCA_001849575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/575/GCA_001849575.1_ASM184957v1	-	02-R0122
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.69988	52	-	JYTH01	40	4759	4508	12/21/15	3/1/17	Contig	FDA	SAMN02912011	GCA_001475375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/375/GCA_001475375.1_Salmonella_enterica_CVM_43842_v1.0	-	CVM 43842
Staphylococcus aureus W86063	1417222	PRJNA226976	226976	Terrabacteria group	Firmicutes	2.81522	32.8	-	JETX01	30	2944	2792	2/24/14	3/3/17	Scaffold	Broad Institute	SAMN02398914	GCA_000580115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/580/115/GCA_000580115.1_Stap_aure_W86063_V1	-	W86063
Staphylococcus aureus SA0077	1460424	PRJNA237679	237679	Terrabacteria group	Firmicutes	2.91195	32.7	-	JEMM01	137	3124	2959	2/28/14	3/3/17	Scaffold	Research Institute of childrens infections	SAMN02639402	GCA_000583615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/583/615/GCA_000583615.1_SauSA0077.0	-	SA0077
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.75488	52.1	-	JYTM01	59	4847	4615	12/22/15	3/1/17	Contig	FDA	SAMN02699187	GCA_001477675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/675/GCA_001477675.1_Salmonella_enterica_CVM_N29307-SQ_v1.0	-	CVM N29307
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35169	65.6	-	MMKI01	40	4258	4081	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916393	GCA_001849615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/615/GCA_001849615.1_ASM184961v1	-	02-R0309
Escherichia coli B15	1151237	PRJNA86821	86821	Proteobacteria	Gammaproteobacteria	5.26703	50.3	-	AVSB01	120	5589	5174	8/29/13	2/25/17	Contig	Institute for Genome Sciences  University of MD School of Medicine	SAMN01885452	GCA_000462185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/185/GCA_000462185.2_ASM46218v2	-	B15
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07576	39.6	-	FHZX01	30	2283	2033	2/10/16	3/8/17	Contig	SC	SAMEA2146043	GCA_900055455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/455/GCA_900055455.1_10678_7_36	-	2690STDY5561697
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.15769	65.7	-	LLSH01	119	6972	6750	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128672	GCA_001452465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/465/GCA_001452465.1_WH-SGI-V-07687	26604259	WH-SGI-V-07687
Klebsiella pneumoniae	573	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.41187	57.4	-	FLYQ01	35	5435	5205	7/21/16	2/21/17	Scaffold	SC	SAMEA3531881	GCA_900093815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/815/GCA_900093815.1_18090_8_78	-	W2-5-ERG6
Klebsiella pneumoniae	573	PRJEB11503	368825	Proteobacteria	Gammaproteobacteria	5.32489	57.4	-	FUVG02	124	5363	5084	2/17/17	6/4/17	Scaffold	IFH_MS	SAMEA4470457	GCA_900108765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/765/GCA_900108765.2_PEI-B-P-08	-	-
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.86831	66	-	LLTH01	143	6640	6403	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128698	GCA_001452805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/805/GCA_001452805.1_WH-SGI-V-07247	26604259	WH-SGI-V-07247
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07681	39.6	-	FICG01	33	2270	2028	2/10/16	3/13/17	Contig	SC	SAMEA2149909	GCA_900055465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/465/GCA_900055465.1_10702_5_18	-	2690STDY5561807
Escherichia coli 14A	1207035	PRJNA170190	170190	Proteobacteria	Gammaproteobacteria	5.32348	50.3	-	AVRQ01	129	5683	5211	8/29/13	2/25/17	Contig	IGS	SAMN01885532	GCA_000462225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/225/GCA_000462225.2_ASM46222v2	-	14A
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41276	65.6	-	MMKG01	8	4284	4102	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916395	GCA_001849645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/645/GCA_001849645.1_ASM184964v1	-	02-R1281
Salmonella enterica subsp. enterica serovar Agona	58095	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.84414	52.1	-	JYTN01	107	4905	4660	12/22/15	3/1/17	Contig	FDA	SAMN02699188	GCA_001477685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/685/GCA_001477685.1_Salmonella_enterica_CVM_N29309-SQ_v1.0	-	CVM N29309
Staphylococcus aureus DAR5814	1422360	PRJNA228450	228450	Terrabacteria group	Firmicutes	2.89297	32.7	-	JFRR01	51	3047	2894	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403910	GCA_000586675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/675/GCA_000586675.1_Stap_aure_DAR5814_V1	-	DAR5814
Staphylococcus aureus DAR5852	1422324	PRJNA228414	228414	Terrabacteria group	Firmicutes	2.81329	32.8	-	JFRS01	38	2920	2779	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403874	GCA_000586695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/695/GCA_000586695.1_Stap_aure_DAR5852_V1	-	DAR5852
Salmonella enterica subsp. enterica serovar Muenster	82689	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.78893	52	-	JYTO01	114	4918	4660	12/22/15	3/1/17	Contig	FDA	SAMN02699189	GCA_001477695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/695/GCA_001477695.1_Salmonella_enterica_CVM_N29310-SQ_v1.0	-	CVM N29310
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37885	65.6	-	MMKF01	8	4255	4090	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916396	GCA_001849665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/665/GCA_001849665.1_ASM184966v1	-	02-R1179
Escherichia coli 2886-75	1207038	PRJNA170193	170193	Proteobacteria	Gammaproteobacteria	5.23906	50.3	-	AVRR01	125	5555	5137	8/29/13	2/25/17	Contig	IGS	SAMN01885535	GCA_000462245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/245/GCA_000462245.2_ASM46224v2	24407635	2886-75
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07405	39.6	-	FIET01	33	2274	2033	2/10/16	3/8/17	Contig	SC	SAMEA2144502	GCA_900055475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/475/GCA_900055475.1_10702_5_87	-	2690STDY5561904
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.1135	65.8	-	LLTJ01	65	6958	6718	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128700	GCA_001452835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/835/GCA_001452835.1_WH-SGI-V-07249	26604259	WH-SGI-V-07249
Klebsiella pneumoniae	573	PRJEB8770	293295	Proteobacteria	Gammaproteobacteria	5.71296	56.7	-	FWGN01	38	5766	5484	3/29/17	4/3/17	Scaffold	SC	SAMEA3304692	GCA_900171705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/705/GCA_900171705.1_16404_3_30	-	VRES0208
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.40345	57.4	-	FWHH01	29	5474	5193	3/29/17	4/3/17	Scaffold	SC	SAMEA3753139	GCA_900171715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/715/GCA_900171715.1_17870_6_25	-	VRES0591
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.78558	66.1	-	LLTK01	79	6529	6333	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128701	GCA_001452865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/865/GCA_001452865.1_WH-SGI-V-07250	26604259	WH-SGI-V-07250
Streptococcus pneumoniae	1313	PRJEB2102	203746	Terrabacteria group	Firmicutes	2.1091	39.6	-	FIUA01	40	2360	2107	2/10/16	3/12/17	Contig	SC	SAMEA685643	GCA_900055545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/545/GCA_900055545.1_4752_1_10	-	C11680
Escherichia coli T1840_97	1081896	PRJNA72921	72921	Proteobacteria	Gammaproteobacteria	5.17113	50.3	-	AVRN01	128	5471	5040	8/29/13	2/25/17	Contig	Institute for Genome Sciences	SAMN01919632	GCA_000462265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/265/GCA_000462265.2_ASM46226v2	-	T1840_97
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34093	65.6	-	MMKE01	8	4235	4071	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916397	GCA_001849675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/675/GCA_001849675.1_ASM184967v1	-	02-R04323
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.85083	52.1	-	JYTP01	138	5001	4733	12/22/15	3/1/17	Contig	FDA	SAMN02699190	GCA_001477735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/735/GCA_001477735.1_Salmonella_enterica_CVM_N29313-SQ_v1.0	-	CVM N29313
Staphylococcus aureus DAR5855	1422321	PRJNA228411	228411	Terrabacteria group	Firmicutes	2.83469	32.8	-	JFRT01	90	2986	2784	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403871	GCA_000586715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/715/GCA_000586715.1_Stap_aure_DAR5855_V1	-	DAR5855
Staphylococcus aureus W85810	1421916	PRJNA227896	227896	Terrabacteria group	Firmicutes	2.76978	32.7	-	JFSP01	64	2868	2695	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403206	GCA_000586735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/735/GCA_000586735.1_Stap_aure_W85810_V1	-	W85810
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.10651	52	-	JYTQ01	115	5282	5012	12/22/15	3/1/17	Contig	FDA	SAMN02699191	GCA_001477745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/745/GCA_001477745.1_Salmonella_enterica_CVM_N29315-SQ_v1.0	-	CVM N29315
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38532	65.6	-	MMKH01	16	4276	4092	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916394	GCA_001849705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/705/GCA_001849705.1_ASM184970v1	-	01-R0919
Escherichia coli TW07509	1105330	PRJNA75283	75283	Proteobacteria	Gammaproteobacteria	4.86129	50.7	-	AVRH01	90	5101	4766	8/29/13	2/25/17	Contig	Institute for Genome Sciences	SAMN01883167	GCA_000462285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/285/GCA_000462285.2_ASM46228v2	-	TW07509
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.07599	39.6	-	FIUY01	75	2304	2076	2/10/16	3/13/17	Contig	SC	SAMEA1033976	GCA_900055555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/555/GCA_900055555.1_7004_3_95	-	D35438
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.48543	66.5	-	LLTM01	53	6049	5915	11/30/15	3/10/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128703	GCA_001452885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/885/GCA_001452885.1_WH-SGI-V-07252	-	WH-SGI-V-07252
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.40354	57.4	-	FWHM01	30	5463	5193	3/29/17	4/3/17	Scaffold	SC	SAMEA3753140	GCA_900171725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/725/GCA_900171725.1_17870_6_28	-	VRES0597
Klebsiella pneumoniae	573	PRJEB8770	293295	Proteobacteria	Gammaproteobacteria	5.4555	57.2	-	FWGM01	43	5476	5215	3/29/17	4/3/17	Scaffold	SC	SAMEA3304700	GCA_900171735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/735/GCA_900171735.1_16404_3_34	-	VRES0300
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.38152	65.1	-	LLTN01	116	7205	6923	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128704	GCA_001452905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/905/GCA_001452905.1_WH-SGI-V-07253	26604259	WH-SGI-V-07253
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.0741	39.6	-	FHYX01	29	2269	2027	2/10/16	3/12/17	Contig	SC	SAMEA2162426	GCA_900055745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/745/GCA_900055745.1_10678_7_12	-	2690STDY5561742
Escherichia coli 08BKT055439	1081888	PRJNA72905	72905	Proteobacteria	Gammaproteobacteria	5.2107	50.3	-	AVRI01	133	5554	5111	8/29/13	2/25/17	Contig	Institute for Genome Sciences	SAMN01919739	GCA_000462305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/305/GCA_000462305.2_ASM46230v2	-	08BKT055439
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34869	65.6	-	MMKD01	10	4239	4073	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916398	GCA_001849725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/725/GCA_001849725.1_ASM184972v1	-	02-R0826
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.93161	52.1	-	JYTR01	106	5076	4825	12/22/15	3/1/17	Contig	FDA	SAMN02699192	GCA_001477755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/755/GCA_001477755.1_Salmonella_enterica_CVM_N29317-SQ_v1.0	-	CVM N29317
Staphylococcus aureus W85807	1421915	PRJNA227895	227895	Terrabacteria group	Firmicutes	2.7692	32.7	-	JFSQ01	56	2880	2692	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403205	GCA_000586755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/755/GCA_000586755.1_Stap_aure_W85807_V1	-	W85807
Staphylococcus aureus W82239	1421914	PRJNA227894	227894	Terrabacteria group	Firmicutes	2.85374	32.8	-	JFSR01	54	2990	2845	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403204	GCA_000586775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/775/GCA_000586775.1_Stap_aure_W82239_V1	-	W82239
Salmonella enterica subsp. enterica serovar Senftenberg	28150	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.83215	52	-	JYTS01	126	4925	4667	12/22/15	3/1/17	Contig	FDA	SAMN02699193	GCA_001477795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/795/GCA_001477795.1_Salmonella_enterica_CVM_N29321-SQ_v1.0	-	CVM N29321
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38676	65.6	-	MMKA01	6	4259	4089	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916401	GCA_001849745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/745/GCA_001849745.1_ASM184974v1	-	03-R0096
Escherichia coli 08BKT77219	1081895	PRJNA72919	72919	Proteobacteria	Gammaproteobacteria	5.3213	50.2	-	AVRJ01	139	5671	5219	8/29/13	2/25/17	Contig	Institute for Genome Sciences	SAMN01919667	GCA_000462325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/325/GCA_000462325.2_ASM46232v2	-	08BKT77219
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07572	39.6	-	FHYW01	29	2281	2033	2/10/16	3/13/17	Contig	SC	SAMEA2160347	GCA_900055755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/755/GCA_900055755.1_10678_7_11	-	2690STDY5561729
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.80146	66.1	-	LLTR01	62	6521	6327	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128708	GCA_001452935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/935/GCA_001452935.1_WH-SGI-V-07258	26604259	WH-SGI-V-07258
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.39975	57.3	-	FWHL01	34	5458	5181	3/29/17	4/10/17	Scaffold	SC	SAMEA3753388	GCA_900171745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/745/GCA_900171745.1_17870_6_32	-	VRES0601
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.5592	57.2	-	FWHP01	57	5643	5328	3/29/17	4/3/17	Scaffold	SC	SAMEA3752607	GCA_900171755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/755/GCA_900171755.1_17870_6_33	-	VRES0602
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.04347	65.8	-	LLTT01	75	6798	6602	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128710	GCA_001452965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/965/GCA_001452965.1_WH-SGI-V-07260	26604259	WH-SGI-V-07260
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07453	39.6	-	FHZC01	31	2280	2029	2/10/16	3/13/17	Contig	SC	SAMEA2159021	GCA_900055765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/765/GCA_900055765.1_10678_7_17	-	2690STDY5561705
Escherichia coli 09BKT024447	1081894	PRJNA72917	72917	Proteobacteria	Gammaproteobacteria	5.35447	50.1	-	AVRK01	149	5712	5253	8/29/13	2/25/17	Contig	Institute for Genome Sciences	SAMN01919631	GCA_000462345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/345/GCA_000462345.2_ASM46234v2	-	09BKT024447
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40397	65.6	-	MMKC01	23	4293	4113	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916399	GCA_001849755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/755/GCA_001849755.1_ASM184975v1	-	02-R0792
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.98913	52.2	-	JYTU01	89	5149	4894	12/22/15	3/1/17	Contig	FDA	SAMN02699195	GCA_001477805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/805/GCA_001477805.1_Salmonella_enterica_CVM_N29338-SQ_v1.0	-	CVM N29338
Staphylococcus aureus W42304	1421910	PRJNA227890	227890	Terrabacteria group	Firmicutes	2.77033	32.7	-	JFSS01	59	2866	2694	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403200	GCA_000586795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/795/GCA_000586795.1_Stap_aure_W42304_V1	-	W42304
Staphylococcus aureus W28921	1421909	PRJNA227889	227889	Terrabacteria group	Firmicutes	2.93691	32.7	-	JFST01	23	3118	2962	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403199	GCA_000586815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/815/GCA_000586815.1_Stap_aure_W28921_V1	-	W28921
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.84713	52.1	-	JYTV01	117	4958	4689	12/22/15	3/1/17	Contig	FDA	SAMN02699196	GCA_001477835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/835/GCA_001477835.1_Salmonella_enterica_CVM_N29339-R_v1.0	-	CVM N29339
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38894	65.6	-	MMJZ01	9	4275	4104	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916402	GCA_001849805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/805/GCA_001849805.1_ASM184980v1	-	02-R1645
Escherichia coli Bd5610_99	1081890	PRJNA72909	72909	Proteobacteria	Gammaproteobacteria	5.34786	50.2	-	AVRL01	140	5724	5248	8/29/13	2/25/17	Contig	Institute for Genome Sciences	SAMN01919655	GCA_000462365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/365/GCA_000462365.2_ASM46236v2	-	Bd5610_99
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07594	39.6	-	FIAQ01	37	2271	2030	2/10/16	3/15/17	Contig	SC	SAMEA2153944	GCA_900055775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/775/GCA_900055775.1_10678_7_53	-	2690STDY5561664
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.38918	66.5	-	LLTW01	39	6084	5925	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128713	GCA_001452995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/452/995/GCA_001452995.1_WH-SGI-V-07265	26604259	WH-SGI-V-07265
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.40278	57.4	-	FWHS01	33	5465	5192	3/29/17	4/3/17	Scaffold	SC	SAMEA3751399	GCA_900171765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/765/GCA_900171765.1_17870_6_37	-	VRES0607
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.40154	57.4	-	FWGR01	33	5463	5190	3/29/17	4/3/17	Scaffold	SC	SAMEA3751411	GCA_900171775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/775/GCA_900171775.1_17870_6_15	-	VRES0575
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.78369	66	-	LLTY01	187	6639	6354	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128715	GCA_001453025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/025/GCA_001453025.1_WH-SGI-V-07267	26604259	WH-SGI-V-07267
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07427	39.6	-	FIBJ01	34	2282	2028	2/10/16	3/13/17	Contig	SC	SAMEA2161825	GCA_900055785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/785/GCA_900055785.1_10678_7_73	-	2690STDY5561786
Escherichia coli T234_00	1081892	PRJNA72913	72913	Proteobacteria	Gammaproteobacteria	5.22377	50.3	-	AVRO01	131	5579	5110	8/29/13	2/25/17	Contig	Institute for Genome Sciences	SAMN01919656	GCA_000462385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/385/GCA_000462385.2_ASM46238v2	-	T234_00
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36181	65.5	-	MMJY01	8	4253	4088	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916403	GCA_001849825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/825/GCA_001849825.1_ASM184982v1	-	02-R1017
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.00626	52	-	JYTX01	115	5196	4920	12/22/15	3/1/17	Contig	FDA	SAMN02699198	GCA_001477855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/855/GCA_001477855.1_Salmonella_enterica_CVM_N29350-SQ_v1.0	-	CVM N29350
Staphylococcus aureus W25797	1421907	PRJNA227887	227887	Terrabacteria group	Firmicutes	2.76904	32.7	-	JFSU01	50	2873	2679	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403197	GCA_000586835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/835/GCA_000586835.1_Stap_aure_W25797_V1	-	W25797
Staphylococcus aureus W19270	1421905	PRJNA227885	227885	Terrabacteria group	Firmicutes	2.87076	32.8	-	JFSV01	31	3011	2857	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403195	GCA_000586855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/855/GCA_000586855.1_Stap_aure_W19270_V1	-	W19270
Salmonella enterica subsp. enterica serovar Litchfield	486998	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.5811	52.2	-	JYUE01	42	4604	4400	12/22/15	3/1/17	Contig	FDA	SAMN02699205	GCA_001477885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/885/GCA_001477885.1_Salmonella_enterica_CVM_N29367_v1.0	-	CVM N29367
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37565	65.6	-	MMJX01	2	4247	4096	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916404	GCA_001849845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/845/GCA_001849845.1_ASM184984v1	-	02-R0887
Escherichia coli B7-2	1151216	PRJNA86779	86779	Proteobacteria	Gammaproteobacteria	5.48847	50.4	-	AVRD01	55	5865	5373	8/29/13	2/25/17	Contig	IGS	SAMN01883253	GCA_000462405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/405/GCA_000462405.2_ASM46240v2	-	B7-2
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07482	39.6	-	FIBK01	37	2274	2030	2/10/16	3/6/17	Contig	SC	SAMEA2161004	GCA_900055795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/795/GCA_900055795.1_10678_7_71	-	2690STDY5561749
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.95718	66.2	-	LLUA01	55	6697	6514	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128717	GCA_001453065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/065/GCA_001453065.1_WH-SGI-V-07272	26604259	WH-SGI-V-07272
Klebsiella pneumoniae	573	PRJEB8766	291369	Proteobacteria	Gammaproteobacteria	5.69215	57.2	-	FWHD01	55	5670	5362	3/29/17	4/10/17	Scaffold	SC	SAMEA3303995	GCA_900171785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/785/GCA_900171785.1_16189_8_4	-	VRCO0019
Klebsiella pneumoniae	573	PRJEB8766	291369	Proteobacteria	Gammaproteobacteria	5.78537	57.5	-	FXBG01	45	5764	5463	4/21/17	5/1/17	Scaffold	SC	SAMEA3304021	GCA_900171795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/795/GCA_900171795.1_16189_8_30	-	VRCO0039
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.08372	65.8	-	LLPK01	142	6876	6596	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128597	GCA_001453155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/155/GCA_001453155.1_WH-SGI-V-07423	26604259	WH-SGI-V-07423
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07586	39.6	-	FIBL01	36	2274	2030	2/10/16	3/13/17	Contig	SC	SAMEA2162901	GCA_900055805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/805/GCA_900055805.1_10678_7_75	-	2690STDY5561898
Escherichia coli B93	1151231	PRJNA86809	86809	Proteobacteria	Gammaproteobacteria	5.51568	50.4	-	AVRE01	49	5894	5376	8/29/13	2/25/17	Contig	IGS	SAMN01883254	GCA_000462425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/425/GCA_000462425.2_ASM46242v2	-	B93
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40145	65.6	-	MMJW01	7	4288	4113	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916405	GCA_001849865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/865/GCA_001849865.1_ASM184986v1	-	02-R1708
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.90489	52.2	-	JYTT01	85	5005	4771	12/22/15	3/1/17	Contig	FDA	SAMN02699194	GCA_001477895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/895/GCA_001477895.1_Salmonella_enterica_CVM_N29323-SQ_v1.0	-	CVM N29323
Staphylococcus aureus W19256	1421904	PRJNA227884	227884	Terrabacteria group	Firmicutes	2.83856	32.7	-	JFSW01	36	2961	2834	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403194	GCA_000586875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/875/GCA_000586875.1_Stap_aure_W19256_V1	-	W19256
Staphylococcus aureus W15995	1421903	PRJNA227883	227883	Terrabacteria group	Firmicutes	2.87899	32.8	-	JFSX01	62	3033	2860	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403193	GCA_000586895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/895/GCA_000586895.1_Stap_aure_W15995_V1	-	W15995
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.95883	51.9	-	JYUB01	69	5069	4820	12/22/15	3/1/17	Contig	FDA	SAMN02699202	GCA_001477905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/905/GCA_001477905.1_Salmonella_enterica_CVM_N29360-SQ_v1.0	-	CVM N29360
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35183	65.6	-	MMJV01	14	4248	4077	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916406	GCA_001849885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/885/GCA_001849885.1_ASM184988v1	-	03-R1132
Escherichia coli B94	1151232	PRJNA86811	86811	Proteobacteria	Gammaproteobacteria	5.51668	50.4	-	AVRF01	56	5921	5408	8/29/13	2/25/17	Contig	IGS	SAMN01883255	GCA_000462445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/445/GCA_000462445.2_ASM46244v2	-	B94
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07618	39.6	-	FICH01	36	2281	2031	2/10/16	3/13/17	Contig	SC	SAMEA2156065	GCA_900055815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/815/GCA_900055815.1_10702_5_19	-	2690STDY5561801
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.75162	66.2	-	LLQJ01	64	6470	6256	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128622	GCA_001453235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/235/GCA_001453235.1_WH-SGI-V-07503	26604259	WH-SGI-V-07503
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.55791	57.2	-	FWGU01	57	5640	5316	3/29/17	4/3/17	Scaffold	SC	SAMEA3751402	GCA_900171805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/805/GCA_900171805.1_17870_4_72	-	VRES0526
Klebsiella pneumoniae	573	PRJEB8771	299375	Proteobacteria	Gammaproteobacteria	5.42485	57.2	-	FWHA01	35	5398	5181	3/29/17	4/3/17	Scaffold	SC	SAMEA3472024	GCA_900171815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/815/GCA_900171815.1_17261_7_1	-	VRCO0033
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.00099	65.9	-	LLQW01	153	6861	6585	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128635	GCA_001453365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/365/GCA_001453365.1_WH-SGI-V-07625	26604259	WH-SGI-V-07625
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07549	39.6	-	FICJ01	34	2281	2029	2/10/16	3/6/17	Contig	SC	SAMEA2144905	GCA_900055825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/825/GCA_900055825.1_10702_5_22	-	2690STDY5561803
Escherichia coli B95	1151233	PRJNA86813	86813	Proteobacteria	Gammaproteobacteria	5.51964	50.4	-	AVRG01	58	5963	5448	8/29/13	2/25/17	Contig	IGS	SAMN01883256	GCA_000462465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/465/GCA_000462465.2_ASM46246v2	-	B95
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38919	65.6	-	MMJT01	25	4270	4096	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916408	GCA_001849905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/905/GCA_001849905.1_ASM184990v1	-	02-R1122
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.83786	52	-	JYUM01	65	4936	4693	12/22/15	3/1/17	Contig	FDA	SAMN02699213	GCA_001477945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/945/GCA_001477945.1_Salmonella_enterica_CVM_N30642-R_v1.0	-	CVM N30642
Staphylococcus aureus W15990	1421902	PRJNA227882	227882	Terrabacteria group	Firmicutes	2.87379	32.7	-	JFSY01	55	3019	2849	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403192	GCA_000586915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/915/GCA_000586915.1_Stap_aure_W15990_V1	-	W15990
Staphylococcus aureus W15976	1421901	PRJNA227881	227881	Terrabacteria group	Firmicutes	2.85009	32.8	-	JFSZ01	42	2975	2829	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403191	GCA_000586935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/935/GCA_000586935.1_Stap_aure_W15976_V1	-	W15976
Salmonella enterica subsp. enterica serovar Reading	165302	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.62737	52.2	-	JYUH01	55	4711	4452	12/22/15	3/1/17	Contig	FDA	SAMN02699208	GCA_001477955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/955/GCA_001477955.1_Salmonella_enterica_CVM_N29378-SQ_v1.0	-	CVM N29378
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38389	65.6	-	MMJS01	25	4270	4094	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916409	GCA_001849915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/915/GCA_001849915.1_ASM184991v1	-	03-R1335
Escherichia coli B103	1151234	PRJNA86815	86815	Proteobacteria	Gammaproteobacteria	5.2358	50.3	-	AVRS01	126	5522	5092	8/29/13	2/25/17	Contig	IGS	SAMN01885449	GCA_000462485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/485/GCA_000462485.2_ASM46248v2	-	B103
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07719	39.6	-	FIEW01	29	2269	2033	2/10/16	3/13/17	Contig	SC	SAMEA2163573	GCA_900055845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/845/GCA_900055845.1_10702_5_85	-	2690STDY5561824
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.76032	66	-	LLRC01	74	6471	6254	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128641	GCA_001453405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/405/GCA_001453405.1_WH-SGI-V-07631	26604259	WH-SGI-V-07631
Klebsiella pneumoniae	573	PRJEB8770	293295	Proteobacteria	Gammaproteobacteria	5.42662	57.2	-	FWGO01	42	5422	5164	3/29/17	4/3/17	Scaffold	SC	SAMEA3304696	GCA_900171825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/825/GCA_900171825.1_16404_3_32	-	VRES0215
Klebsiella pneumoniae	573	PRJEB8770	293295	Proteobacteria	Gammaproteobacteria	5.71388	56.7	-	FWGW01	38	5767	5480	3/29/17	4/3/17	Scaffold	SC	SAMEA3304691	GCA_900171835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/835/GCA_900171835.1_16404_3_29	-	VRES0205
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.02342	65.9	-	LLRD01	122	6775	6466	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128642	GCA_001453415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/415/GCA_001453415.1_WH-SGI-V-07632	26604259	WH-SGI-V-07632
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.0781	39.6	-	FHZJ01	30	2285	2029	2/10/16	3/13/17	Contig	SC	SAMEA2144474	GCA_900056055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/055/GCA_900056055.1_10678_7_23	-	2690STDY5561805
Escherichia coli B104	1151243	PRJNA86835	86835	Proteobacteria	Gammaproteobacteria	5.22805	50.3	-	AVRT01	122	5508	5085	8/29/13	2/25/17	Contig	IGS	SAMN01885524	GCA_000462505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/505/GCA_000462505.2_ASM46250v2	-	B104
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36414	65.6	-	MMJU01	7	4259	4083	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916407	GCA_001849935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/935/GCA_001849935.1_ASM184993v1	-	02-R0791
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.85616	52.2	-	JYUN01	69	4978	4744	12/22/15	3/1/17	Contig	FDA	SAMN02699214	GCA_001477965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/477/965/GCA_001477965.1_Salmonella_enterica_CVM_N30645-SQ_v1.0	-	CVM N30645
Staphylococcus aureus W15974	1421900	PRJNA227880	227880	Terrabacteria group	Firmicutes	2.83204	32.8	-	JFTA01	45	2989	2819	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403190	GCA_000586955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/955/GCA_000586955.1_Stap_aure_W15974_V1	-	W15974
Staphylococcus aureus W12583	1421898	PRJNA227878	227878	Terrabacteria group	Firmicutes	2.96352	32.7	-	JFTB01	32	3150	2978	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403188	GCA_000586975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/975/GCA_000586975.1_Stap_aure_W12583_V1	-	W12583
Salmonella enterica subsp. enterica serovar Hindmarsh	1079901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.79118	52.1	-	JYUT01	92	4919	4681	12/22/15	3/1/17	Contig	FDA	SAMN02699220	GCA_001478005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/005/GCA_001478005.1_Salmonella_enterica_CVM_N30673-SQ_v1.0	-	CVM N30673
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38439	65.6	-	MMIO01	14	4263	4091	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916439	GCA_001849985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/985/GCA_001849985.1_ASM184998v1	-	02-R0375
Escherichia coli B105	1151247	PRJNA86843	86843	Proteobacteria	Gammaproteobacteria	5.23592	50.3	-	AVRU01	129	5539	5111	8/29/13	2/25/17	Contig	IGS	SAMN01885526	GCA_000462525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/525/GCA_000462525.2_ASM46252v2	-	B105
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07434	39.6	-	FHZK01	28	2269	2031	2/10/16	3/12/17	Contig	SC	SAMEA2144650	GCA_900056065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/065/GCA_900056065.1_10678_7_25	-	2690STDY5561663
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.07469	65.8	-	LLRK01	196	6591	6398	11/30/15	3/10/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128649	GCA_001453465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/465/GCA_001453465.1_WH-SGI-V-07639	-	WH-SGI-V-07639
Klebsiella pneumoniae	573	PRJEB8770	293295	Proteobacteria	Gammaproteobacteria	5.71039	56.7	-	FWGZ01	32	5760	5468	3/29/17	4/3/17	Scaffold	SC	SAMEA3304689	GCA_900171845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/845/GCA_900171845.1_16404_3_28	-	VRES0196
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.39965	57.3	-	FWHX01	29	5451	5181	3/29/17	4/10/17	Scaffold	SC	SAMEA3753143	GCA_900171855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/855/GCA_900171855.1_17870_6_36	-	VRES0606
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.23501	65.6	-	LLTQ01	181	7078	6751	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128707	GCA_001453855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/855/GCA_001453855.1_WH-SGI-V-07256	26604259	WH-SGI-V-07256
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07476	39.6	-	FHZP01	30	2269	2029	2/10/16	3/13/17	Contig	SC	SAMEA2158949	GCA_900056075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/075/GCA_900056075.1_10678_7_29	-	2690STDY5561736
Escherichia coli B106	1151248	PRJNA86845	86845	Proteobacteria	Gammaproteobacteria	5.2039	50.2	-	AVRV01	119	5506	5083	8/29/13	2/25/17	Contig	IGS	SAMN01885529	GCA_000462545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/545/GCA_000462545.2_ASM46254v2	-	B106
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38734	65.6	-	MMIX01	15	4274	4086	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916430	GCA_001849995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/995/GCA_001849995.1_ASM184999v1	-	02-R1705
Salmonella enterica subsp. enterica serovar Derby	28144	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.78147	52.1	-	JYUV01	116	4899	4625	12/22/15	3/1/17	Contig	FDA	SAMN02699222	GCA_001478025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/025/GCA_001478025.1_Salmonella_enterica_CVM_N30679-SQ_v1.0	-	CVM N30679
Staphylococcus aureus W12582	1421897	PRJNA227877	227877	Terrabacteria group	Firmicutes	2.89329	32.7	-	JFTC01	18	3058	2894	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403187	GCA_000586995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/995/GCA_000586995.1_Stap_aure_W12582_V1	-	W12582
Staphylococcus aureus T62976	1421894	PRJNA227874	227874	Terrabacteria group	Firmicutes	2.87818	32.7	-	JFTD01	16	3037	2881	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403184	GCA_000587015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/015/GCA_000587015.1_Stap_aure_T62976_V1	-	T62976
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.96944	52.1	-	JYUY01	134	5125	4844	12/22/15	3/1/17	Contig	FDA	SAMN02699225	GCA_001478045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/045/GCA_001478045.1_Salmonella_enterica_CVM_N30693-SQ_v1.0	-	CVM N30693
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40378	65.6	-	MMJQ01	17	4275	4100	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916411	GCA_001850005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/005/GCA_001850005.1_ASM185000v1	-	02-R1689
Escherichia coli B108	550673	PRJNA86833	86833	Proteobacteria	Gammaproteobacteria	5.21516	50.2	-	AVRW01	121	5533	5104	8/29/13	2/25/17	Contig	IGS	SAMN01885523	GCA_000462565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/565/GCA_000462565.2_ASM46256v2	-	B108
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07606	39.6	-	FHZQ01	34	2286	2032	2/10/16	3/13/17	Contig	SC	SAMEA2162497	GCA_900056085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/085/GCA_900056085.1_10678_7_3	-	2690STDY5561844
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.42202	66.5	-	LLUF01	46	6093	5940	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128722	GCA_001453945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/945/GCA_001453945.1_WH-SGI-V-07279	26604259	WH-SGI-V-07279
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.54917	57.2	-	FWHU01	48	5627	5318	3/29/17	4/3/17	Scaffold	SC	SAMEA3752273	GCA_900171865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/865/GCA_900171865.1_17870_6_31	-	VRES0600
Klebsiella pneumoniae	573	PRJEB8766	291369	Proteobacteria	Gammaproteobacteria	5.64125	57.1	-	FWGB01	109	5626	5338	3/29/17	4/10/17	Scaffold	SC	SAMEA3304008	GCA_900171875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/875/GCA_900171875.1_16189_8_17	-	VRCO0056
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.37759	66.4	-	LLTX01	78	6037	5867	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128714	GCA_001453985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/985/GCA_001453985.1_WH-SGI-V-07266	26604259	WH-SGI-V-07266
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07585	39.6	-	FHZS01	32	2285	2033	2/10/16	3/8/17	Contig	SC	SAMEA2154989	GCA_900056095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/095/GCA_900056095.1_10678_7_31	-	2690STDY5561766
Escherichia coli B109	1151244	PRJNA86837	86837	Proteobacteria	Gammaproteobacteria	5.21483	50.3	-	AVRX01	120	5534	5110	8/29/13	2/25/17	Contig	IGS	SAMN01885525	GCA_000462585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/585/GCA_000462585.2_ASM46258v2	-	B109
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34936	65.6	-	MMIN01	6	4234	4080	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916440	GCA_001850045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/045/GCA_001850045.1_ASM185004v1	-	01-R1166
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.02089	52.1	-	JYUZ01	120	5180	4898	12/22/15	3/1/17	Contig	FDA	SAMN02699226	GCA_001478065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/065/GCA_001478065.1_Salmonella_enterica_CVM_N30696-SQ_v1.0	-	CVM N30696
Staphylococcus aureus T55960	1421893	PRJNA227873	227873	Terrabacteria group	Firmicutes	2.87721	32.8	-	JFTE01	53	3000	2867	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403183	GCA_000587035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/035/GCA_000587035.1_Stap_aure_T55960_V1	-	T55960
Staphylococcus aureus T55959	1421892	PRJNA227872	227872	Terrabacteria group	Firmicutes	2.86139	32.7	-	JFTF01	41	3016	2864	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403182	GCA_000587055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/055/GCA_000587055.1_Stap_aure_T55959_V1	-	T55959
Salmonella enterica subsp. enterica serovar Derby	28144	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.03812	52.1	-	JYVB01	171	5218	4906	12/22/15	3/1/17	Contig	FDA	SAMN02699228	GCA_001478085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/085/GCA_001478085.1_Salmonella_enterica_CVM_N30705-R_v1.0	-	CVM N30705
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39218	65.6	-	MMIM01	8	4259	4112	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916441	GCA_001850055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/055/GCA_001850055.1_ASM185005v1	-	02-R1147
Escherichia coli B112	1151249	PRJNA86847	86847	Proteobacteria	Gammaproteobacteria	5.31935	50.2	-	AVRY01	125	5655	5207	8/29/13	2/25/17	Contig	IGS	SAMN01885527	GCA_000462605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/605/GCA_000462605.2_ASM46260v2	-	B112
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07539	39.6	-	FHZT01	38	2280	2031	2/10/16	3/15/17	Contig	SC	SAMEA2152614	GCA_900056105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/105/GCA_900056105.1_10678_7_32	-	2690STDY5561726
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.00335	65.9	-	LLUK01	156	6777	6514	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128727	GCA_001454085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/085/GCA_001454085.1_WH-SGI-V-07574	26604259	WH-SGI-V-07284
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.55897	57.2	-	FWHO01	50	5650	5334	3/29/17	4/3/17	Scaffold	SC	SAMEA3751396	GCA_900171885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/885/GCA_900171885.1_17870_6_29	-	VRES0598
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.4025	57.4	-	FWHF01	26	5468	5195	3/29/17	4/3/17	Scaffold	SC	SAMEA3751412	GCA_900171895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/895/GCA_900171895.1_17870_6_18	-	VRES0590
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.31906	66.5	-	LLUL01	69	5981	5811	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128728	GCA_001454095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/095/GCA_001454095.1_WH-SGI-V-07856	26604259	WH-SGI-V-07286
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07549	39.6	-	FIAT01	35	2285	2032	2/10/16	3/13/17	Contig	SC	SAMEA2146494	GCA_900056115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/115/GCA_900056115.1_10678_7_56	-	2690STDY5561706
Escherichia coli B113	1151250	PRJNA86849	86849	Proteobacteria	Gammaproteobacteria	5.31117	50.2	-	AVRZ01	138	5625	5193	8/29/13	2/25/17	Contig	IGS	SAMN01885530	GCA_000462625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/625/GCA_000462625.2_ASM46262v2	-	B113
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38031	65.6	-	MMIP01	4	4266	4082	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916438	GCA_001850085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/085/GCA_001850085.1_ASM185008v1	-	03-R0290
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.86548	52	-	JYVD01	137	4942	4652	12/22/15	3/1/17	Contig	FDA	SAMN02699230	GCA_001478105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/105/GCA_001478105.1_Salmonella_enterica_CVM_N31384-SQ_v1.0	-	CVM N31384
Staphylococcus aureus T35622	1421889	PRJNA227869	227869	Terrabacteria group	Firmicutes	2.8972	32.7	-	JFTG01	16	3060	2898	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403179	GCA_000587075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/075/GCA_000587075.1_Stap_aure_T35622_V1	-	T35622
Staphylococcus aureus T32086	1421887	PRJNA227867	227867	Terrabacteria group	Firmicutes	2.86484	32.8	-	JFTH01	13	3024	2866	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403177	GCA_000587095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/095/GCA_000587095.1_Stap_aure_T32086_V1	-	T32086
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.10742	52	-	JYVG01	116	5269	5003	12/22/15	3/1/17	Contig	FDA	SAMN02699233	GCA_001478125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/125/GCA_001478125.1_Salmonella_enterica_CVM_N31395-SQ_v1.0	-	CVM N31395
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39432	65.6	-	MMIL01	7	4262	4098	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916442	GCA_001850105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/105/GCA_001850105.1_ASM185010v1	-	01-R0170
Escherichia coli B114	1151251	PRJNA86851	86851	Proteobacteria	Gammaproteobacteria	5.30948	50.2	-	AVSA01	125	5646	5199	8/29/13	2/25/17	Contig	IGS	SAMN01885531	GCA_000462645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/645/GCA_000462645.2_ASM46264v2	-	B114
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07304	39.6	-	FICB01	34	2276	2023	2/10/16	3/13/17	Contig	SC	SAMEA2156040	GCA_900056125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/125/GCA_900056125.1_10702_5_10	-	2690STDY5561939
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.81339	66.1	-	LLUO01	130	6505	6286	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128731	GCA_001454145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/145/GCA_001454145.1_WH-SGI-V-07291	26604259	WH-SGI-V-07291
Klebsiella pneumoniae	573	PRJEB8766	291369	Proteobacteria	Gammaproteobacteria	5.21556	57.6	-	FWGI01	33	5151	4951	3/29/17	4/3/17	Scaffold	SC	SAMEA3304016	GCA_900171905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/905/GCA_900171905.1_16189_8_25	-	VRCO0108
Klebsiella pneumoniae	573	PRJEB8770	293295	Proteobacteria	Gammaproteobacteria	5.71354	56.7	-	FWGY01	34	5770	5489	3/29/17	4/3/17	Scaffold	SC	SAMEA3304694	GCA_900171915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/915/GCA_900171915.1_16404_3_31	-	VRES0209
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.41552	66.3	-	LLUQ01	51	6106	5936	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128733	GCA_001454175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/175/GCA_001454175.1_WH-SGI-V-07294	26604259	WH-SGI-V-07294
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07574	39.6	-	FIEC01	33	2278	2032	2/10/16	3/13/17	Contig	SC	SAMEA2157581	GCA_900056135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/135/GCA_900056135.1_10702_5_67	-	2690STDY5561767
Escherichia coli B17	1151238	PRJNA86823	86823	Proteobacteria	Gammaproteobacteria	5.25124	50.3	-	AVSC01	120	5586	5164	8/29/13	2/25/17	Contig	IGS	SAMN01885453	GCA_000462665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/665/GCA_000462665.2_ASM46266v2	-	B17
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38487	65.6	-	MMIK01	12	4265	4098	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916443	GCA_001850125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/125/GCA_001850125.1_ASM185012v1	-	01-R1458
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.69586	52.1	-	JYVH01	45	4812	4557	12/22/15	3/1/17	Contig	FDA	SAMN02699234	GCA_001478145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/145/GCA_001478145.1_Salmonella_enterica_CVM_N31397-SQ_v1.0	-	CVM N31397
Staphylococcus aureus M90388	1421882	PRJNA227862	227862	Terrabacteria group	Firmicutes	2.86697	32.7	-	JFTI01	58	3029	2856	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403172	GCA_000587115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/115/GCA_000587115.1_Stap_aure_M90388_V1	-	M90388
Staphylococcus aureus M86943	1421881	PRJNA227861	227861	Terrabacteria group	Firmicutes	2.86003	32.7	-	JFTJ01	19	3017	2865	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403171	GCA_000587135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/135/GCA_000587135.1_Stap_aure_M86943_V1	-	M86943
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.04886	51.9	-	JYVN01	84	5186	4930	12/22/15	3/1/17	Contig	FDA	SAMN02699240	GCA_001478155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/155/GCA_001478155.1_Salmonella_enterica_CVM_N31414-SQ_v1.0	-	CVM N31414
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39149	65.6	-	MMIJ01	2	4263	4102	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916444	GCA_001850135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/135/GCA_001850135.1_ASM185013v1	-	02-R0417
Escherichia coli B40-1	1151227	PRJNA86801	86801	Proteobacteria	Gammaproteobacteria	5.27256	50.2	-	AVSD01	131	5600	5169	8/29/13	2/25/17	Contig	IGS	SAMN01885447	GCA_000462685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/685/GCA_000462685.2_ASM46268v2	-	B40-1
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07491	39.6	-	FIEI01	27	2281	2033	2/10/16	3/13/17	Contig	SC	SAMEA2155889	GCA_900056145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/145/GCA_900056145.1_10702_5_70	-	2690STDY5561737
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.04523	65.8	-	LLUU01	123	5829	5551	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128737	GCA_001454265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/265/GCA_001454265.1_WH-SGI-V-07300	26604259	WH-SGI-V-07300
Klebsiella pneumoniae	573	PRJEB8770	293295	Proteobacteria	Gammaproteobacteria	5.5432	57.1	-	FWHE01	47	5567	5289	3/29/17	4/3/17	Scaffold	SC	SAMEA3304686	GCA_900171925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/925/GCA_900171925.1_16404_3_27	-	VRES0160
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.56018	57.2	-	FWHI01	50	5641	5329	3/29/17	4/3/17	Scaffold	SC	SAMEA3751413	GCA_900171935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/935/GCA_900171935.1_17870_6_20	-	VRES0594
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.44122	66.3	-	LLUZ01	70	6105	5931	11/30/15	3/24/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128742	GCA_001454325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/325/GCA_001454325.1_WH-SGI-V-07310	26604259	WH-SGI-V-07310
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07399	39.6	-	FIED01	33	2272	2031	2/10/16	3/12/17	Contig	SC	SAMEA2148098	GCA_900056155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/155/GCA_900056155.1_10702_5_71	-	2690STDY5561827
Escherichia coli B40-2	1151228	PRJNA86803	86803	Proteobacteria	Gammaproteobacteria	5.2739	50.3	-	AVSE01	131	5584	5156	8/29/13	2/25/17	Contig	IGS	SAMN01885448	GCA_000462705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/705/GCA_000462705.2_ASM46270v2	-	B40-2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.391	65.6	-	MMIF01	12	4284	4095	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916448	GCA_001850185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/185/GCA_001850185.1_ASM185018v1	-	02-R1641
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91465	52.1	-	JYVX01	91	5051	4808	12/22/15	3/1/17	Contig	FDA	SAMN02699250	GCA_001478185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/185/GCA_001478185.1_Salmonella_enterica_CVM_N32052-SQ_v1.0	-	CVM N32052
Staphylococcus aureus M86940	1421880	PRJNA227860	227860	Terrabacteria group	Firmicutes	2.85882	32.7	-	JFTK01	14	3018	2863	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403170	GCA_000587155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/155/GCA_000587155.1_Stap_aure_M86940_V1	-	M86940
Staphylococcus aureus M79686	1421879	PRJNA227859	227859	Terrabacteria group	Firmicutes	2.91003	32.7	-	JFTL01	21	3068	2898	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403169	GCA_000587175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/175/GCA_000587175.1_Stap_aure_M79686_V1	-	M79686
Salmonella enterica subsp. enterica serovar Mbandaka	192954	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.73958	52.2	-	JYVZ01	95	4842	4589	12/22/15	3/1/17	Contig	FDA	SAMN02699252	GCA_001478205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/205/GCA_001478205.1_Salmonella_enterica_CVM_N32055-SQ_v1.0	-	CVM N32055
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39159	65.6	-	MMIH01	13	4270	4099	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916446	GCA_001850195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/195/GCA_001850195.1_ASM185019v1	-	02-R1534
Escherichia coli B49-2	1151246	PRJNA86841	86841	Proteobacteria	Gammaproteobacteria	5.23617	50.3	-	AVSF01	127	5521	5082	8/29/13	2/25/17	Contig	IGS	SAMN01885528	GCA_000462725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/725/GCA_000462725.2_ASM46272v2	-	B49-2
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.0768	39.6	-	FHWQ01	35	2273	2029	2/10/16	3/8/17	Contig	SC	SAMEA1965983	GCA_900056445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/445/GCA_900056445.1_10678_6_22	-	2690STDY5561857
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.53369	66.4	-	LLVC01	87	6220	6035	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128745	GCA_001454365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/365/GCA_001454365.1_WH-SGI-V-07313	26604259	WH-SGI-V-07313
Klebsiella pneumoniae	573	PRJEB8766	291369	Proteobacteria	Gammaproteobacteria	5.6335	57.1	-	FWGD01	99	5612	5342	3/29/17	4/10/17	Scaffold	SC	SAMEA3304013	GCA_900171945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/945/GCA_900171945.1_16189_8_22	-	VRCO0063
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.56652	57.2	-	FWHR01	55	5658	5336	3/29/17	4/3/17	Scaffold	SC	SAMEA3751395	GCA_900171955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/955/GCA_900171955.1_17870_6_26	-	VRES0595
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.35561	66.6	-	LLVD01	41	6011	5849	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128746	GCA_001454385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/385/GCA_001454385.1_WH-SGI-V-07314	26604259	WH-SGI-V-07314
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07544	39.6	-	FHYZ01	34	2288	2033	2/10/16	3/13/17	Contig	SC	SAMEA2151298	GCA_900056455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/455/GCA_900056455.1_10678_7_15	-	2690STDY5561916
Escherichia coli B5-2	1151224	PRJNA86795	86795	Proteobacteria	Gammaproteobacteria	5.23799	50.3	-	AVSG01	123	5578	5166	8/29/13	2/25/17	Contig	IGS	SAMN01885446	GCA_000462745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/745/GCA_000462745.2_ASM46274v2	-	B5-2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38158	65.6	-	MMII01	9	4253	4087	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916445	GCA_001850225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/225/GCA_001850225.1_ASM185022v1	-	03-R0159
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.89747	52.1	-	JYWC01	71	5006	4768	12/22/15	3/1/17	Contig	FDA	SAMN02699255	GCA_001478225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/225/GCA_001478225.1_Salmonella_enterica_CVM_N32750-SQ_v1.0	-	CVM N32750
Staphylococcus aureus M79671	1421877	PRJNA227857	227857	Terrabacteria group	Firmicutes	2.81985	32.8	-	JFTM01	57	2937	2797	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403167	GCA_000587195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/195/GCA_000587195.1_Stap_aure_M79671_V1	-	M79671
Staphylococcus aureus M79256	1421876	PRJNA227856	227856	Terrabacteria group	Firmicutes	2.89587	32.7	-	JFTN01	34	3082	2911	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403166	GCA_000587215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/215/GCA_000587215.1_Stap_aure_M79256_V1	-	M79256
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.06608	51.8	-	JYWF01	73	5211	4950	12/22/15	3/1/17	Contig	FDA	SAMN02699258	GCA_001478245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/245/GCA_001478245.1_Salmonella_enterica_CVM_N32763-SQ_v1.0	-	CVM N32763
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35097	65.6	-	MMIB01	6	4235	4074	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916452	GCA_001850265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/265/GCA_001850265.1_ASM185026v1	-	02-R0969
Escherichia coli B83	1151239	PRJNA86825	86825	Proteobacteria	Gammaproteobacteria	5.24217	50.2	-	AVSH01	129	5562	5124	8/29/13	2/25/17	Contig	IGS	SAMN01885454	GCA_000462765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/765/GCA_000462765.2_ASM46276v2	-	B83
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.0751	39.6	-	FIAE01	30	2279	2032	2/10/16	3/13/17	Contig	SC	SAMEA2148573	GCA_900056465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/465/GCA_900056465.1_10678_7_42	-	2690STDY5561832
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.24768	66.6	-	LLVE01	41	5952	5790	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128747	GCA_001454395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/395/GCA_001454395.1_WH-SGI-V-07316	26604259	WH-SGI-V-07316
Klebsiella pneumoniae	573	PRJEB8770	293295	Proteobacteria	Gammaproteobacteria	5.44496	57.3	-	FWGV01	44	5439	5197	3/29/17	4/3/17	Scaffold	SC	SAMEA3304682	GCA_900171965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/965/GCA_900171965.1_16404_3_25	-	VRES0134
Klebsiella pneumoniae	573	PRJEB8766	291369	Proteobacteria	Gammaproteobacteria	5.77528	56.8	-	FWGF01	59	5702	5367	3/29/17	4/3/17	Scaffold	SC	SAMEA3304020	GCA_900171975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/975/GCA_900171975.1_16189_8_29	-	VRCO0145
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.43396	66.4	-	LLVF01	89	6130	5944	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128748	GCA_001454415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/415/GCA_001454415.1_WH-SGI-V-07317	26604259	WH-SGI-V-07317
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07239	39.6	-	FIDN01	31	2275	2025	2/10/16	3/13/17	Contig	SC	SAMEA2144041	GCA_900056475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/475/GCA_900056475.1_10702_5_5	-	2690STDY5561927
Escherichia coli B84	1151240	PRJNA86827	86827	Proteobacteria	Gammaproteobacteria	5.25077	50.3	-	AVSI01	130	5543	5106	8/29/13	2/25/17	Contig	IGS	SAMN01885455	GCA_000462785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/785/GCA_000462785.2_ASM46278v2	-	B84
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38643	65.6	-	MMIC01	13	4276	4096	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916451	GCA_001850275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/275/GCA_001850275.1_ASM185027v1	-	02-R1721
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.74805	52.2	-	JYWP01	74	4840	4608	12/22/15	3/1/17	Contig	FDA	SAMN02699268	GCA_001478265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/265/GCA_001478265.1_Salmonella_enterica_CVM_N37925-SQ_v1.0	-	CVM N37925
Staphylococcus aureus M79254	1421875	PRJNA227855	227855	Terrabacteria group	Firmicutes	2.90382	32.7	-	JFTO01	26	3088	2918	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403165	GCA_000587235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/235/GCA_000587235.1_Stap_aure_M79254_V1	-	M79254
Staphylococcus aureus M72097	1421874	PRJNA227854	227854	Terrabacteria group	Firmicutes	2.87819	32.7	-	JFTP01	16	3035	2877	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403164	GCA_000587255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/255/GCA_000587255.1_Stap_aure_M72097_V1	-	M72097
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.10808	52.1	-	JYWT01	85	5267	5034	12/22/15	3/1/17	Contig	FDA	SAMN02699272	GCA_001478285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/285/GCA_001478285.1_Salmonella_enterica_CVM_N37950-SQ_v1.0	-	CVM N37950
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39532	65.6	-	MMID01	18	4274	4102	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916450	GCA_001850285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/285/GCA_001850285.1_ASM185028v1	-	99-R995
Escherichia coli B85	1151241	PRJNA86829	86829	Proteobacteria	Gammaproteobacteria	5.23814	50.2	-	AVSJ01	127	5550	5109	8/29/13	2/25/17	Contig	IGS	SAMN01885456	GCA_000462805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/805/GCA_000462805.2_ASM46280v2	-	B85
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07615	39.6	-	FHWS01	33	2286	2035	2/10/16	3/13/17	Contig	SC	SAMEA2153628	GCA_900056745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/745/GCA_900056745.1_10678_6_25	-	2690STDY5561891
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.18091	65.6	-	LLVI01	149	7011	6713	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128751	GCA_001454445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/445/GCA_001454445.1_WH-SGI-V-07322	26604259	WH-SGI-V-07322
Klebsiella pneumoniae	573	PRJEB8766	291369	Proteobacteria	Gammaproteobacteria	5.5774	57.3	-	FWGT01	59	5528	5228	3/29/17	4/3/17	Scaffold	SC	SAMEA3303997	GCA_900171985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/985/GCA_900171985.1_16189_8_6	-	VRCO0021
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.4024	57.4	-	FWHJ01	31	5464	5189	3/29/17	4/3/17	Scaffold	SC	SAMEA3753384	GCA_900171995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/995/GCA_900171995.1_17870_6_23	-	VRES0565
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.90613	65.8	-	LLVK01	126	6622	6334	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128753	GCA_001454485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/485/GCA_001454485.1_WH-SGI-V-07324	26604259	WH-SGI-V-07324
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07561	39.6	-	FHWX01	37	2276	2028	2/10/16	3/13/17	Contig	SC	SAMEA2143066	GCA_900056755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/755/GCA_900056755.1_10678_6_29	-	2690STDY5561919
Escherichia coli B86	1151242	PRJNA86831	86831	Proteobacteria	Gammaproteobacteria	5.30334	50.2	-	AVSK01	135	5646	5211	8/29/13	2/25/17	Contig	IGS	SAMN01885522	GCA_000462825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/825/GCA_000462825.2_ASM46282v2	-	B86
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40527	65.6	-	MMIA01	3	4290	4117	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916453	GCA_001850325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/325/GCA_001850325.1_ASM185032v1	-	02-R0894
Salmonella enterica subsp. enterica serovar Senftenberg	28150	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.11035	51.9	-	JYWQ01	137	5241	4951	12/22/15	3/1/17	Contig	FDA	SAMN02699269	GCA_001478295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/295/GCA_001478295.1_Salmonella_enterica_CVM_N37931-SQ_v1.0	-	CVM N37931
Staphylococcus aureus M70018	1421873	PRJNA227853	227853	Terrabacteria group	Firmicutes	2.86037	32.7	-	JFTQ01	20	3024	2861	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403163	GCA_000587275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/275/GCA_000587275.1_Stap_aure_M70018_V1	-	M70018
Staphylococcus aureus M70017	1421872	PRJNA227852	227852	Terrabacteria group	Firmicutes	2.86374	32.7	-	JFTR01	14	3023	2862	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403162	GCA_000587295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/295/GCA_000587295.1_Stap_aure_M70017_V1	-	M70017
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.96283	52.1	-	JYXD01	81	5097	4847	12/22/15	3/1/17	Contig	FDA	SAMN02699282	GCA_001478325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/325/GCA_001478325.1_Salmonella_enterica_CVM_N38858-SQ_v1.0	-	CVM N38858
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40538	65.6	-	MMHW01	2	4272	4112	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916457	GCA_001850365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/365/GCA_001850365.1_ASM185036v1	-	02-R1903
Escherichia coli B89	1151235	PRJNA86817	86817	Proteobacteria	Gammaproteobacteria	5.31427	50.3	-	AVSL01	136	5670	5212	8/29/13	2/25/17	Contig	IGS	SAMN01885450	GCA_000462845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/845/GCA_000462845.2_ASM46284v2	-	B89
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07486	39.6	-	FHZA01	30	2284	2034	2/10/16	3/13/17	Contig	SC	SAMEA2156154	GCA_900056765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/765/GCA_900056765.1_10678_7_14	-	2690STDY5561841
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.13066	65.6	-	LLVL01	149	6955	6655	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128754	GCA_001454495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/495/GCA_001454495.1_WH-SGI-V-07325	26604259	WH-SGI-V-07325
Klebsiella pneumoniae	573	PRJEB8770	293295	Proteobacteria	Gammaproteobacteria	5.32914	57.4	-	FWGX01	24	5354	5111	3/29/17	4/3/17	Scaffold	SC	SAMEA3304702	GCA_900172005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/005/GCA_900172005.1_16404_3_35	-	VRES0318
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.50056	57.3	-	FWHT01	53	5562	5251	3/29/17	4/10/17	Scaffold	SC	SAMEA3752691	GCA_900172015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/015/GCA_900172015.1_17870_6_35	-	VRES0605
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.90966	65.6	-	LLVO01	125	6704	6429	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128757	GCA_001454515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/515/GCA_001454515.1_WH-SGI-V-07364	26604259	WH-SGI-V-07328
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07445	39.6	-	FIAI01	34	2279	2029	2/10/16	3/13/17	Contig	SC	SAMEA2146057	GCA_900056775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/775/GCA_900056775.1_10678_7_43	-	2690STDY5561829
Escherichia coli B90	1151236	PRJNA86819	86819	Proteobacteria	Gammaproteobacteria	5.31594	50.3	-	AVSM01	133	5654	5201	8/29/13	2/25/17	Contig	IGS	SAMN01885451	GCA_000462865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/865/GCA_000462865.2_ASM46286v2	-	B90
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38852	65.6	-	MMHY01	4	4260	4099	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916455	GCA_001850375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/375/GCA_001850375.1_ASM185037v1	-	02-R1858
Salmonella enterica subsp. enterica serovar Senftenberg	28150	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.86759	52	-	JYXG01	88	4935	4674	12/22/15	3/1/17	Contig	FDA	SAMN02699285	GCA_001478345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/345/GCA_001478345.1_Salmonella_enterica_CVM_N38864-R_v1.0	-	CVM N38864
Staphylococcus aureus M67938	1421871	PRJNA227851	227851	Terrabacteria group	Firmicutes	2.88036	32.7	-	JFTS01	21	3045	2881	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403161	GCA_000587315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/315/GCA_000587315.1_Stap_aure_M67938_V1	-	M67938
Staphylococcus aureus M42184	1421870	PRJNA227850	227850	Terrabacteria group	Firmicutes	2.86489	32.7	-	JFTT01	61	3032	2856	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403160	GCA_000587335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/335/GCA_000587335.1_Stap_aure_M42184_V1	-	M42184
Salmonella enterica subsp. enterica serovar Anatum	58712	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.7655	52.2	-	JYXM01	66	4880	4634	12/22/15	3/1/17	Contig	FDA	SAMN02699291	GCA_001478355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/355/GCA_001478355.1_Salmonella_enterica_CVM_N38876-SQ_v1.0	-	CVM N38876
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38731	65.6	-	MMHV01	7	4262	4094	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916458	GCA_001850395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/395/GCA_001850395.1_ASM185039v1	-	03-R0909
Escherichia coli Tx1686	1207037	PRJNA170192	170192	Proteobacteria	Gammaproteobacteria	5.22846	50.3	-	AVSN01	125	5553	5098	8/29/13	2/25/17	Contig	IGS	SAMN01885534	GCA_000462885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/885/GCA_000462885.2_ASM46288v2	-	Tx1686
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07359	39.6	-	FIBN01	28	2269	2031	2/10/16	3/12/17	Contig	SC	SAMEA2154215	GCA_900056785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/785/GCA_900056785.1_10678_7_76	-	2690STDY5561838
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.9967	65.7	-	LLVP01	101	6794	6495	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128758	GCA_001454545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/545/GCA_001454545.1_WH-SGI-V-07329	26604259	WH-SGI-V-07329
Klebsiella pneumoniae	573	PRJEB8766	291369	Proteobacteria	Gammaproteobacteria	5.3056	57.3	-	FWGK01	59	5296	5034	3/29/17	4/3/17	Scaffold	SC	SAMEA3303992	GCA_900172025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/025/GCA_900172025.1_16189_8_1	-	VRCO0003
Klebsiella pneumoniae	573	PRJEB8766	291369	Proteobacteria	Gammaproteobacteria	5.57795	57.3	-	FWGE01	68	5550	5297	3/29/17	4/3/17	Scaffold	SC	SAMEA3304011	GCA_900172035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/035/GCA_900172035.1_16189_8_20	-	VRCO0059
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.10838	65.8	-	LLVQ01	150	6885	6604	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128759	GCA_001454565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/565/GCA_001454565.1_WH-SGI-V-07330	26604259	WH-SGI-V-07330
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07779	39.6	-	FIEA01	32	2272	2035	2/10/16	3/6/17	Contig	SC	SAMEA2143929	GCA_900056795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/795/GCA_900056795.1_10702_5_63	-	2690STDY5561699
Escherichia coli Tx3800	1207036	PRJNA170191	170191	Proteobacteria	Gammaproteobacteria	5.2775	50.2	-	AVSO01	138	5610	5179	8/29/13	2/25/17	Contig	IGS	SAMN01885533	GCA_000462905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/462/905/GCA_000462905.2_ASM46290v2	-	Tx3800
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38275	65.6	-	MMHX01	7	4252	4090	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916456	GCA_001850405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/405/GCA_001850405.1_ASM185040v1	-	02-R1813
"Salmonella enterica subsp. arizonae serovar 18:z4,z23:-"	1192839	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.4887	51.5	-	JYXQ01	91	4490	4030	12/22/15	3/1/17	Contig	FDA	SAMN02699295	GCA_001478385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/385/GCA_001478385.1_Salmonella_enterica_CVM_N38891-SQ_v1.0	-	CVM N38891
Staphylococcus aureus M17074	1421869	PRJNA227849	227849	Terrabacteria group	Firmicutes	2.89434	32.7	-	JFTU01	55	3038	2896	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403159	GCA_000587355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/355/GCA_000587355.1_Stap_aure_M17074_V1	-	M17074
Staphylococcus aureus H88185	1421867	PRJNA227847	227847	Terrabacteria group	Firmicutes	2.83577	32.8	-	JFTV01	44	2956	2821	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403157	GCA_000587375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/375/GCA_000587375.1_Stap_aure_H88185_V1	-	H88185
Salmonella enterica subsp. enterica serovar Agona	58095	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.75993	52	-	JYXS01	104	4843	4569	12/22/15	3/1/17	Contig	FDA	SAMN02699297	GCA_001478405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/405/GCA_001478405.1_Salmonella_enterica_CVM_N38894-SQ_v1.0	-	CVM N38894
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37467	65.6	-	MMHT01	4	4262	4099	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916460	GCA_001850445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/445/GCA_001850445.1_ASM185044v1	-	97-05201
Escherichia coli 95NR1	1333536	PRJNA202852	202852	Proteobacteria	Gammaproteobacteria	5.3996	50.4	-	AVDU01	181	5969	5411	8/28/13	2/22/17	Contig	University of Adelaide	SAMN02314370	GCA_000467695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/695/GCA_000467695.1_95NR1	-	95NR1
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07682	39.6	-	FIEF01	34	2280	2032	2/10/16	3/13/17	Contig	SC	SAMEA2154143	GCA_900056805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/805/GCA_900056805.1_10702_5_64	-	2690STDY5561892
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.32186	66.4	-	LLUG01	52	6008	5859	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128723	GCA_001454625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/625/GCA_001454625.1_WH-SGI-V-07790	26604259	WH-SGI-V-07280
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.40287	57.4	-	FWHG01	34	5469	5191	3/29/17	4/3/17	Scaffold	SC	SAMEA3753163	GCA_900172045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/045/GCA_900172045.1_17870_6_19	-	VRES0593
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.34794	57.4	-	FWHQ01	33	5392	5125	3/29/17	4/3/17	Scaffold	SC	SAMEA3753389	GCA_900172055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/055/GCA_900172055.1_17870_6_34	-	VRES0604
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.67114	66.3	-	LLUV01	105	6391	6193	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128738	GCA_001454705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/705/GCA_001454705.1_WH-SGI-V-07302	26604259	WH-SGI-V-07302
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07594	39.6	-	FIEV01	32	2272	2029	2/10/16	3/13/17	Contig	SC	SAMEA2159794	GCA_900056815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/815/GCA_900056815.1_10702_5_86	-	2690STDY5561725
Escherichia coli ATCC 35150	1389955	PRJNA215944	215944	Proteobacteria	Gammaproteobacteria	5.25647	50.5	-	AWXM02	358	5593	5117	9/30/13	2/22/17	Contig	American Type Culture Collection	SAMN02469310	GCA_000473725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/725/GCA_000473725.2_O199v4	-	ATCC 35150
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40198	65.6	-	MMZS01	3	4279	4117	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916225	GCA_001850465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/465/GCA_001850465.1_ASM185046v1	-	00-R1549
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.16354	52.1	-	JYXZ01	87	5344	5079	12/22/15	3/1/17	Contig	FDA	SAMN02699304	GCA_001478425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/425/GCA_001478425.1_Salmonella_enterica_CVM_N38925-SQ_v1.0	-	CVM N38925
Staphylococcus aureus H84959	1421866	PRJNA227846	227846	Terrabacteria group	Firmicutes	2.86143	32.7	-	JFTW01	16	3022	2869	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403156	GCA_000587395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/395/GCA_000587395.1_Stap_aure_H84959_V1	-	H84959
Staphylococcus aureus H75421	1421862	PRJNA227842	227842	Terrabacteria group	Firmicutes	2.92899	32.7	-	JFTX01	22	3113	2945	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403152	GCA_000587415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/415/GCA_000587415.1_Stap_aure_H75421_V1	-	H75421
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.99193	52.2	-	JYYC01	89	5168	4929	12/22/15	3/1/17	Contig	FDA	SAMN02699307	GCA_001478445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/445/GCA_001478445.1_Salmonella_enterica_CVM_N38944-SQ_v1.0	-	CVM N38944
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38475	65.6	-	MMZR01	11	4266	4111	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916226	GCA_001850475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/475/GCA_001850475.1_ASM185047v1	-	01-R0059
Escherichia coli BIDMC 19C	1328445	PRJNA202029	202029	Proteobacteria	Gammaproteobacteria	5.52348	50.4	-	AXLI01	5	5695	5328	10/18/13	2/22/17	Contig	Broad Institute	SAMN02138648	GCA_000474825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/825/GCA_000474825.1_Esch_coli_BIDMC_19C_V1_PacBio	-	BIDMC 19C
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07403	39.6	-	FICL01	33	2269	2029	2/10/16	3/13/17	Contig	SC	SAMEA2150767	GCA_900057035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/035/GCA_900057035.1_10702_5_21	-	2690STDY5561698
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	6.88127	66.1	-	LLUW01	56	6577	6392	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128739	GCA_001454725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/725/GCA_001454725.1_WH-SGI-V-07305	26604259	WH-SGI-V-07305
Klebsiella pneumoniae	573	PRJEB8766	291369	Proteobacteria	Gammaproteobacteria	5.33382	57.3	-	FWGA01	70	5322	5020	3/29/17	4/3/17	Scaffold	SC	SAMEA3303993	GCA_900172065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/065/GCA_900172065.1_16189_8_2	-	VRCO0004
Klebsiella pneumoniae	573	PRJEB8770	293295	Proteobacteria	Gammaproteobacteria	5.44706	57.3	-	FWHC01	43	5436	5191	3/29/17	4/10/17	Scaffold	SC	SAMEA3304684	GCA_900172075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/075/GCA_900172075.1_16404_3_26	-	VRES0139
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.08964	65.8	-	LLVH01	138	6886	6597	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128750	GCA_001454785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/785/GCA_001454785.1_WH-SGI-V-07320	26604259	WH-SGI-V-07320
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07689	39.6	-	FHWU01	42	2274	2028	2/10/16	3/13/17	Contig	SC	SAMEA2161070	GCA_900057185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/185/GCA_900057185.1_10678_6_26	-	2690STDY5561900
Escherichia coli BWH 24	1328435	PRJNA201983	201983	Proteobacteria	Gammaproteobacteria	5.43461	50.7	-	AXLH01	4	5712	5337	10/18/13	2/22/17	Contig	Broad Institute	SAMN02138605	GCA_000474845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/845/GCA_000474845.1_Esch_coli_BWH_24_V1_PacBio	-	BWH 24
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39929	65.6	-	MMHU01	4	4269	4095	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916459	GCA_001850495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/495/GCA_001850495.1_ASM185049v1	-	03-R0866
Salmonella enterica subsp. enterica serovar Derby	28144	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.88395	52.1	-	JYYM01	53	4980	4723	12/22/15	3/1/17	Contig	FDA	SAMN02699316	GCA_001478465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/465/GCA_001478465.1_Salmonella_enterica_CVM_N40386-R_v1.0	-	CVM N40386
Staphylococcus aureus H72131	1421860	PRJNA227840	227840	Terrabacteria group	Firmicutes	2.82245	32.8	-	JFTY01	55	2962	2809	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403150	GCA_000587435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/435/GCA_000587435.1_Stap_aure_H72131_V1	-	H72131
Staphylococcus aureus H68996	1421858	PRJNA227838	227838	Terrabacteria group	Firmicutes	2.93289	32.7	-	JFTZ01	23	3123	2960	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403148	GCA_000587455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/455/GCA_000587455.1_Stap_aure_H68996_V1	-	H68996
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.9213	51.8	-	JYYS01	128	5015	4672	12/22/15	3/1/17	Contig	FDA	SAMN02699322	GCA_001478475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/475/GCA_001478475.1_Salmonella_enterica_CVM_N40925-SQ_v1.0	-	CVM N40925
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40095	65.6	-	MMZV01	5	4279	4126	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916222	GCA_001850525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/525/GCA_001850525.1_ASM185052v1	-	01-R0779
Escherichia coli B28-2	1151218	PRJNA86783	86783	Proteobacteria	Gammaproteobacteria	5.27721	50.3	-	AVQX01	122	5583	5161	8/29/13	2/25/17	Contig	IGS	SAMN01883228	GCA_000477495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/477/495/GCA_000477495.2_ASM47749v2	-	B28-2
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07539	39.6	-	FHWV01	31	2278	2028	2/10/16	3/13/17	Contig	SC	SAMEA2156552	GCA_900057195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/195/GCA_900057195.1_10678_6_27	-	2690STDY5561911
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.16553	65.7	-	LLVM01	309	6909	6608	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128755	GCA_001454805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/805/GCA_001454805.1_WH-SGI-V-07326	26604259	WH-SGI-V-07326
Klebsiella pneumoniae	573	PRJEB8766	291369	Proteobacteria	Gammaproteobacteria	5.45782	57	-	FWGJ01	79	5379	5072	3/29/17	4/3/17	Scaffold	SC	SAMEA3304019	GCA_900172085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/085/GCA_900172085.1_16189_8_28	-	VRCO0126
Klebsiella pneumoniae	573	PRJEB8770	293295	Proteobacteria	Gammaproteobacteria	5.88446	56.9	-	FWGL01	51	5912	5610	3/29/17	4/10/17	Scaffold	SC	SAMEA3304698	GCA_900172095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/095/GCA_900172095.1_16404_3_33	-	VRES0298
Pseudomonas aeruginosa	287	PRJNA297679	297679	Proteobacteria	Gammaproteobacteria	7.43561	65.5	-	LLVN01	182	7333	6969	11/30/15	3/22/17	Scaffold	"Synthetic Genomics Vaccines, Inc."	SAMN04128756	GCA_001454825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/454/825/GCA_001454825.1_WH-SGI-V-07327	26604259	WH-SGI-V-07327
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07819	39.6	-	FHWZ01	31	2258	2033	2/10/16	3/13/17	Contig	SC	SAMEA2157262	GCA_900057205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/205/GCA_900057205.1_10678_6_30	-	2690STDY5561887
Escherichia coli 8624	1127125	PRJNA79023	79023	Proteobacteria	Gammaproteobacteria	5.51828	50.3	-	AIAK01	133	5952	5455	8/13/13	2/22/17	Contig	University of Maryland School of Medicine	SAMN02435937	GCA_000478215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/478/215/GCA_000478215.1_ASM47821v1	-	8624
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36937	65.6	-	MMZU01	10	4263	4089	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916223	GCA_001850535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/535/GCA_001850535.1_ASM185053v1	-	01-R1275
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91184	52.1	-	JYYX01	101	5071	4816	12/22/15	3/1/17	Contig	FDA	SAMN02699327	GCA_001478505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/505/GCA_001478505.1_Salmonella_enterica_CVM_N41746-SQ_v1.0	-	CVM N41746
Staphylococcus aureus H65883	1421857	PRJNA227837	227837	Terrabacteria group	Firmicutes	2.84216	32.7	-	JFUA01	19	2991	2831	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403147	GCA_000587475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/475/GCA_000587475.1_Stap_aure_H65883_V1	-	H65883
Staphylococcus aureus H65882	1421856	PRJNA227836	227836	Terrabacteria group	Firmicutes	2.87415	32.7	-	JFUB01	28	3011	2886	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403146	GCA_000587495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/495/GCA_000587495.1_Stap_aure_H65882_V1	-	H65882
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.10971	51.6	-	JYZA01	134	5228	4935	12/22/15	3/1/17	Contig	FDA	SAMN02699330	GCA_001478525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/525/GCA_001478525.1_Salmonella_enterica_CVM_N41900-SQ_v1.0	-	CVM N41900
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37538	65.6	-	MMZZ01	10	4242	4081	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916218	GCA_001850565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/565/GCA_001850565.1_ASM185056v1	-	01-R1379
Escherichia coli SCD1	1337384	PRJNA205120	205120	Proteobacteria	Gammaproteobacteria	4.44883	50.9	-	ATJZ01	130	4636	4259	10/25/13	2/22/17	Contig	Institute of Microbial Technology	SAMN02470009	GCA_000482045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/045/GCA_000482045.1_Escherichia_coli_SCD1	-	SCD1
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.0747	39.6	-	FIAJ01	41	2274	2029	2/10/16	3/15/17	Contig	SC	SAMEA2150962	GCA_900057215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/215/GCA_900057215.1_10678_7_46	-	2690STDY5561754
Pseudomonas aeruginosa	287	PRJNA305963	305963	Proteobacteria	Gammaproteobacteria	6.12919	66.5	-	LORA01	199	5834	5602	12/28/15	3/19/17	Scaffold	University of Toronto	SAMN04335865	GCA_001482865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/865/GCA_001482865.1_ASM148286v1	-	SMC4386_delta_CRISPR_Cas
Klebsiella pneumoniae	573	PRJEB8771	299375	Proteobacteria	Gammaproteobacteria	5.54849	57.1	-	FWGQ01	37	5652	5375	3/29/17	4/3/17	Scaffold	SC	SAMEA3472025	GCA_900172105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/105/GCA_900172105.1_17261_7_2	-	VRCO0034
Klebsiella pneumoniae	573	PRJEB8766	291369	Proteobacteria	Gammaproteobacteria	5.65075	57	-	FWGC01	140	5632	5327	3/29/17	4/10/17	Scaffold	SC	SAMEA3304010	GCA_900172115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/115/GCA_900172115.1_16189_8_19	-	VRCO0058
Pseudomonas aeruginosa	287	PRJNA305964	305964	Proteobacteria	Gammaproteobacteria	6.4613	66.3	-	LORB01	242	6199	5929	12/28/15	3/19/17	Scaffold	University of Toronto	SAMN04335866	GCA_001482875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/875/GCA_001482875.1_ASM148287v1	-	SMC4389
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07497	39.6	-	FIAK01	34	2280	2030	2/10/16	3/12/17	Contig	SC	SAMEA2156939	GCA_900057225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/225/GCA_900057225.1_10678_7_47	-	2690STDY5561820
Escherichia coli SCD2	1337385	PRJNA205121	205121	Proteobacteria	Gammaproteobacteria	4.39309	50.7	-	ATKA01	123	4585	4246	10/25/13	2/22/17	Contig	Institute of Microbial Technology	SAMN02469991	GCA_000482065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/065/GCA_000482065.1_Escherichia_coli_SCD2	-	SCD2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38088	65.6	-	MMZT01	11	4256	4085	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916224	GCA_001850585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/585/GCA_001850585.1_ASM185058v1	-	01-R1554
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.81907	52.1	-	JYZD01	117	4938	4684	12/22/15	3/1/17	Contig	FDA	SAMN02699333	GCA_001478535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/535/GCA_001478535.1_Salmonella_enterica_CVM_N41909-SQ_v1.0	-	CVM N41909
Staphylococcus aureus H65881	1421855	PRJNA227835	227835	Terrabacteria group	Firmicutes	2.87449	32.7	-	JFUC01	22	3052	2888	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403145	GCA_000587515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/515/GCA_000587515.1_Stap_aure_H65881_V1	-	H65881
Staphylococcus aureus H65878	1421854	PRJNA227834	227834	Terrabacteria group	Firmicutes	2.891	32.7	-	JFUD01	14	3043	2895	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403144	GCA_000587535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/535/GCA_000587535.1_Stap_aure_H65878_V1	-	H65878
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.01128	51.7	-	JYZF01	231	5083	4741	12/22/15	3/1/17	Contig	FDA	SAMN02699335	GCA_001478565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/565/GCA_001478565.1_Salmonella_enterica_CVM_N41924-SQ_v1.0	-	CVM N41924
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40397	65.6	-	MMZQ01	9	4286	4118	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916227	GCA_001850605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/605/GCA_001850605.1_ASM185060v1	-	01-R0884
Escherichia coli str. K-12 substr. MG1655	511145	PRJNA217911	217911	Proteobacteria	Gammaproteobacteria	4.63892	50.8	-	AYEK01	1	4777	4471	10/25/13	2/22/17	Contig	Broad Institute	SAMN02596920	GCA_000482265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/482/265/GCA_000482265.1_EC_K12_MG1655_Broad_SNP	-	K-12 substr. MG1655
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07552	39.6	-	FHXA01	37	2278	2025	2/10/16	3/13/17	Contig	SC	SAMEA2157728	GCA_900057435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/435/GCA_900057435.1_10678_6_31	-	2690STDY5561864
Pseudomonas aeruginosa	287	PRJNA305962	305962	Proteobacteria	Gammaproteobacteria	6.24516	66.5	-	LOQZ01	178	5929	5697	12/28/15	3/19/17	Scaffold	University of Toronto	SAMN04335864	GCA_001482885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/482/885/GCA_001482885.1_ASM148288v1	-	SMC4386
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.40256	57.4	-	FWGS01	39	5462	5192	3/29/17	4/3/17	Scaffold	SC	SAMEA3753162	GCA_900172125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/125/GCA_900172125.1_17870_6_17	-	VRES0589
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.55846	57.2	-	FWGP01	52	5649	5314	3/29/17	4/3/17	Scaffold	SC	SAMEA3753146	GCA_900172135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/135/GCA_900172135.1_17870_4_71	-	VRES0525
Pseudomonas aeruginosa	287	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	7.40856	65.3	-	LODH01	105	7238	6996	2/11/16	3/19/17	Scaffold	Miami University	SAMN03076164	GCA_001560865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/865/GCA_001560865.1_ASM156086v1	-	105777
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07707	39.6	-	FHXG01	27	2283	2034	2/10/16	3/13/17	Contig	SC	SAMEA2153660	GCA_900057445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/445/GCA_900057445.1_10678_6_39	-	2690STDY5561865
Escherichia coli ATCC BAA-2192	1404261	PRJNA221236	221236	Proteobacteria	Gammaproteobacteria	5.32943	50.3	-	AYGW02	330	5740	5319	11/8/13	2/23/17	Contig	American Type Culture Collection	SAMN02469304	GCA_000496345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/345/GCA_000496345.2_O455v2	-	ATCC BAA-2192
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38797	65.6	-	MMZM01	6	4272	4110	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916231	GCA_001850645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/645/GCA_001850645.1_ASM185064v1	-	01-R1430
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.80818	52.3	-	JYZJ01	141	4925	4656	12/22/15	3/1/17	Contig	FDA	SAMN02699339	GCA_001478585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/585/GCA_001478585.1_Salmonella_enterica_CVM_N42237-SQ_v1.0	-	CVM N42237
Staphylococcus aureus H65863	1421853	PRJNA227833	227833	Terrabacteria group	Firmicutes	2.87091	32.8	-	JFUE01	41	3007	2837	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403143	GCA_000587555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/555/GCA_000587555.1_Stap_aure_H65863_V1	-	H65863
Staphylococcus aureus H31086	1421849	PRJNA227829	227829	Terrabacteria group	Firmicutes	2.86463	32.7	-	JFUF01	20	3030	2876	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403139	GCA_000587575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/575/GCA_000587575.1_Stap_aure_H31086_V1	-	H31086
Salmonella enterica subsp. enterica serovar Javiana	363569	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.63573	52.1	-	JYZM01	61	4709	4457	12/22/15	3/1/17	Contig	FDA	SAMN02699342	GCA_001478595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/595/GCA_001478595.1_Salmonella_enterica_CVM_N42337-SQ_v1.0	-	CVM N42337
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35083	65.6	-	MMZO01	14	4241	4083	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916229	GCA_001850665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/665/GCA_001850665.1_ASM185066v1	-	01-R0276
Escherichia coli ATCC BAA-2193	1404262	PRJNA221241	221241	Proteobacteria	Gammaproteobacteria	5.419	50.3	-	AYMX02	451	5942	5462	11/8/13	2/22/17	Contig	American Type Culture Collection	SAMN02469305	GCA_000496365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/365/GCA_000496365.2_Q456v4	-	ATCC BAA-2193
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07619	39.6	-	FHZR01	34	2286	2035	2/10/16	3/13/17	Contig	SC	SAMEA2143673	GCA_900057455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/455/GCA_900057455.1_10678_7_30	-	2690STDY5561806
Pseudomonas aeruginosa	287	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	6.91427	66	-	LOHI01	86	6741	6516	3/29/16	3/19/17	Scaffold	Miami University	SAMN03069734	GCA_001601585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/585/GCA_001601585.1_ASM160158v1	-	105880
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.40172	57.3	-	FWHK01	31	5461	5189	3/29/17	4/3/17	Scaffold	SC	SAMEA3752689	GCA_900172145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/145/GCA_900172145.1_17870_6_30	-	VRES0599
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.5633	57.2	-	FWHN01	48	5655	5328	3/29/17	4/3/17	Scaffold	SC	SAMEA3752688	GCA_900172155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/155/GCA_900172155.1_17870_6_27	-	VRES0596
Pseudomonas aeruginosa	287	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	6.78315	66.1	-	LOHK01	137	6482	6194	3/29/16	3/19/17	Scaffold	Miami University	SAMN03076167	GCA_001601595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/595/GCA_001601595.1_ASM160159v1	-	105738
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07694	39.6	-	FIBT01	34	2281	2034	2/10/16	3/13/17	Contig	SC	SAMEA2144498	GCA_900057465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/465/GCA_900057465.1_10678_7_82	-	2690STDY5561712
Escherichia coli ECC-1470	758831	PRJNA48065	48065	Proteobacteria	Gammaproteobacteria	4.7394	50.7	-	AHHM01	994	5262	4457	11/21/13	4/21/17	Contig	Cornell University	SAMN02429089	GCA_000498215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/215/GCA_000498215.1_ASM49821v1	25807497	ECC-1470
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35334	65.6	-	MMZL01	22	4247	4077	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916232	GCA_001850685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/685/GCA_001850685.1_ASM185068v1	-	01-R1018
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.01191	52.1	-	JYTW01	94	5145	4884	12/22/15	3/1/17	Contig	FDA	SAMN02699197	GCA_001478625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/625/GCA_001478625.1_Salmonella_enterica_CVM_N29343-SQ_v1.0	-	CVM N29343
Staphylococcus aureus H31084	1421847	PRJNA227827	227827	Terrabacteria group	Firmicutes	2.86685	32.7	-	JFUG01	19	3029	2871	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403137	GCA_000587595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/595/GCA_000587595.1_Stap_aure_H31084_V1	-	H31084
Staphylococcus aureus H22656	1421846	PRJNA227826	227826	Terrabacteria group	Firmicutes	2.92693	32.7	-	JFUH01	23	3118	2949	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403136	GCA_000587615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/615/GCA_000587615.1_Stap_aure_H22656_V1	-	H22656
Salmonella enterica subsp. enterica serovar Bredeney	134047	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.86577	51.9	-	JYTY01	129	5036	4754	12/22/15	3/1/17	Contig	FDA	SAMN02699199	GCA_001478645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/645/GCA_001478645.1_Salmonella_enterica_CVM_N29351-R_v1.0	-	CVM N29351
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41347	65.6	-	MMZN01	10	4289	4109	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916230	GCA_001850695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/695/GCA_001850695.1_ASM185069v1	-	01-R1433
Escherichia coli ECC-Z	758832	PRJNA48067	48067	Proteobacteria	Gammaproteobacteria	4.91159	50.7	-	AHHN01	24	5068	4781	11/21/13	2/22/17	Contig	Cornell University	SAMN02429038	GCA_000498235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/235/GCA_000498235.1_ASM49823v1	25807497	ECC-Z
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07717	39.6	-	FIDZ01	31	2271	2034	2/10/16	3/13/17	Contig	SC	SAMEA2156835	GCA_900057475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/475/GCA_900057475.1_10702_5_66	-	2690STDY5561731
Pseudomonas aeruginosa	287	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	6.93377	66	-	LOHJ01	93	6788	6558	3/29/16	3/19/17	Scaffold	Miami University	SAMN03076166	GCA_001601665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/665/GCA_001601665.1_ASM160166v1	-	105857
Klebsiella pneumoniae	573	PRJEB8766	291369	Proteobacteria	Gammaproteobacteria	5.62667	57.1	-	FWGH01	107	5589	5333	3/29/17	4/3/17	Scaffold	SC	SAMEA3304009	GCA_900172165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/165/GCA_900172165.1_16189_8_18	-	VRCO0057
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.40323	57.4	-	FWHB01	34	5466	5194	3/29/17	4/3/17	Scaffold	SC	SAMEA3752747	GCA_900172175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/175/GCA_900172175.1_17870_6_16	-	VRES0577
Pseudomonas aeruginosa	287	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	7.20893	65.7	-	LOHH01	63	6932	6709	3/29/16	3/19/17	Scaffold	Miami University	SAMN03076165	GCA_001601745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/745/GCA_001601745.1_ASM160174v1	-	105819
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07689	39.6	-	FHWW01	29	2276	2032	2/10/16	3/13/17	Contig	SC	SAMEA2158728	GCA_900057665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/665/GCA_900057665.1_10678_6_28	-	2690STDY5561882
Escherichia coli P4-96	1097579	PRJNA74269	74269	Proteobacteria	Gammaproteobacteria	4.86459	50.8	-	AHHO01	97	5028	4756	11/21/13	2/22/17	Contig	Cornell University	SAMN02428926	GCA_000498255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/255/GCA_000498255.1_ASM49825v1	-	P4-96
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39026	65.6	-	MMZK01	18	4263	4095	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916233	GCA_001850705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/705/GCA_001850705.1_ASM185070v1	-	01-R1046
"Salmonella enterica subsp. arizonae serovar 18:z4,z23:-"	1192839	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.48761	51.5	-	JYTZ01	93	4492	4019	12/22/15	3/1/17	Contig	FDA	SAMN02699200	GCA_001478655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/655/GCA_001478655.1_Salmonella_enterica_CVM_N29355-SQ_v1.0	-	CVM N29355
Staphylococcus aureus F64896	1421842	PRJNA227822	227822	Terrabacteria group	Firmicutes	2.8622	32.7	-	JFUI01	13	3023	2868	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403132	GCA_000587635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/635/GCA_000587635.1_Stap_aure_F64896_V1	-	F64896
Staphylococcus aureus F64894	1421841	PRJNA227821	227821	Terrabacteria group	Firmicutes	2.91637	32.7	-	JFUJ01	56	3060	2912	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403131	GCA_000587655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/655/GCA_000587655.1_Stap_aure_F64894_V1	-	F64894
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.80165	52.2	-	JYUA01	70	4925	4671	12/22/15	3/1/17	Contig	FDA	SAMN02699201	GCA_001478685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/685/GCA_001478685.1_Salmonella_enterica_CVM_N29357-SQ_v1.0	-	CVM N29357
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38992	65.6	-	MMZJ01	13	4264	4094	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916234	GCA_001850745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/745/GCA_001850745.1_ASM185074v1	-	01-R0572
Escherichia coli P4-NR	1117111	PRJNA77697	77697	Proteobacteria	Gammaproteobacteria	4.86148	50.8	-	AHHP01	107	5024	4752	11/21/13	2/22/17	Contig	Cornell University	SAMN02429039	GCA_000498275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/275/GCA_000498275.1_ASM49827v1	-	P4-NR
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07611	39.6	-	FHWL01	33	2270	2030	2/10/16	3/13/17	Contig	SC	SAMEA2158206	GCA_900057905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/905/GCA_900057905.1_10678_6_18	-	2690STDY5561856
Pseudomonas aeruginosa	287	PRJNA294925	294925	Proteobacteria	Gammaproteobacteria	7.03887	65.9	-	LSZV01	145	6824	6542	4/19/16	3/20/17	Scaffold	i3 Institute	SAMN04038435	GCA_001623945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/945/GCA_001623945.1_ASM162394v1	26962050	RNS_PA1
Klebsiella pneumoniae	573	PRJEB8766	291369	Proteobacteria	Gammaproteobacteria	5.17314	57.6	-	FWGG01	46	5095	4893	3/29/17	4/10/17	Scaffold	SC	SAMEA3304003	GCA_900172185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/185/GCA_900172185.1_16189_8_12	-	VRCO0036
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.40454	57.4	-	FWHW01	33	5468	5190	3/29/17	4/3/17	Scaffold	SC	SAMEA3752692	GCA_900172425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/425/GCA_900172425.1_17870_6_38	-	VRES0608
Pseudomonas aeruginosa	287	PRJNA294928	294928	Proteobacteria	Gammaproteobacteria	7.1251	65.8	-	LSZU01	171	6932	6644	4/19/16	3/20/17	Scaffold	i3 Institute	SAMN04038437	GCA_001623955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/955/GCA_001623955.1_ASM162395v1	26962050	RNS_PA46
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07687	39.6	-	FHWM01	26	2263	2028	2/10/16	3/15/17	Contig	SC	SAMEA2153949	GCA_900057915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/915/GCA_900057915.1_10678_6_19	-	2690STDY5561884
Escherichia coli LAU-EC2	1389423	PRJNA215776	215776	Proteobacteria	Gammaproteobacteria	5.17825	50.7	-	AYLY01	118	5506	5100	11/25/13	2/25/17	Contig	Lebanese American University	SAMN02470238	GCA_000498795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/795/GCA_000498795.2_LAU-EC2	24558252	LAU-EC2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40051	65.6	-	MMZH01	36	4283	4121	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916236	GCA_001850775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/775/GCA_001850775.1_ASM185077v1	-	01-R1227
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91706	52.1	-	JYUC01	71	5055	4812	12/22/15	3/1/17	Contig	FDA	SAMN02699203	GCA_001478705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/705/GCA_001478705.1_Salmonella_enterica_CVM_N29362-R_v1.0	-	CVM N29362
Staphylococcus aureus F36099	1421838	PRJNA227818	227818	Terrabacteria group	Firmicutes	2.92656	32.8	-	JFUK01	53	3095	2920	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403128	GCA_000587675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/675/GCA_000587675.1_Stap_aure_F36099_V1	-	F36099
Staphylococcus aureus F36097	1421837	PRJNA227817	227817	Terrabacteria group	Firmicutes	2.92413	32.8	-	JFUL01	55	3089	2908	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403127	GCA_000587695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/695/GCA_000587695.1_Stap_aure_F36097_V1	-	F36097
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91419	52	-	JYUD01	80	4983	4685	12/22/15	3/1/17	Contig	FDA	SAMN02699204	GCA_001478715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/715/GCA_001478715.1_Salmonella_enterica_CVM_N29363-SQ_v1.0	-	CVM N29363
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38619	65.6	-	MMZG01	21	4270	4095	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916237	GCA_001850785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/785/GCA_001850785.1_ASM185078v1	-	02-R0993
Escherichia coli LAU-EC3	1389424	PRJNA215777	215777	Proteobacteria	Gammaproteobacteria	5.3118	50.5	-	AYOO01	113	5622	5240	11/25/13	2/25/17	Contig	Lebanese American University	SAMN02470231	GCA_000498815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/815/GCA_000498815.2_EC3	24558252	LAU-EC3
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07695	39.6	-	FHWO01	32	2273	2033	2/10/16	3/8/17	Contig	SC	SAMEA2142457	GCA_900057925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/925/GCA_900057925.1_10678_6_20	-	2690STDY5561893
Pseudomonas aeruginosa	287	PRJNA294931	294931	Proteobacteria	Gammaproteobacteria	7.04294	65.9	-	LSZT01	175	6854	6540	4/19/16	3/20/17	Scaffold	i3 Institute	SAMN04038440	GCA_001623985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/985/GCA_001623985.1_ASM162398v1	26962050	RNS_PAE05
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.40331	57.4	-	FWHV01	32	5467	5192	3/29/17	4/3/17	Scaffold	SC	SAMEA3752609	GCA_900172435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/435/GCA_900172435.1_17870_6_39	-	VRES0609
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.40124	57.4	-	FWHZ01	31	5460	5187	3/29/17	4/3/17	Scaffold	SC	SAMEA3752309	GCA_900172445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/445/GCA_900172445.1_17870_6_40	-	VRES0610
Pseudomonas aeruginosa	287	PRJNA294726	294726	Proteobacteria	Gammaproteobacteria	6.73778	66.1	-	LZQK01	307	6376	6089	10/11/16	3/20/17	Scaffold	Technical University of Denmark	SAMN04029209	GCA_001756425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/425/GCA_001756425.1_ASM175642v1	-	9AR3
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07511	39.6	-	FHZL01	31	2271	2033	2/10/16	3/13/17	Contig	SC	SAMEA2148967	GCA_900057935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/935/GCA_900057935.1_10678_7_24	-	2690STDY5561839
Escherichia coli LAU-EC4	1389425	PRJNA215778	215778	Proteobacteria	Gammaproteobacteria	5.32162	50.6	-	AYOP01	156	5633	5141	11/25/13	2/25/17	Contig	Lebanese American University	SAMN02470240	GCA_000498835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/835/GCA_000498835.2_LAU-EC4	24558252	LAU-EC4
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38772	65.6	-	MMZF01	12	4262	4095	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916238	GCA_001850825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/825/GCA_001850825.1_ASM185082v1	-	02-R0149
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.93648	51.9	-	JYUF01	63	5033	4790	12/22/15	3/1/17	Contig	FDA	SAMN02699206	GCA_001478745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/745/GCA_001478745.1_Salmonella_enterica_CVM_N29369-R_v1.0	-	CVM N29369
Staphylococcus aureus F36090	1421835	PRJNA227815	227815	Terrabacteria group	Firmicutes	2.93498	32.7	-	JFUM01	16	3113	2947	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403125	GCA_000587715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/715/GCA_000587715.1_Stap_aure_F36090_V1	-	F36090
Staphylococcus aureus F27252	1421834	PRJNA227814	227814	Terrabacteria group	Firmicutes	2.93158	32.7	-	JFUN01	23	3119	2954	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403124	GCA_000587735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/735/GCA_000587735.1_Stap_aure_F27252_V1	-	F27252
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.89371	52	-	JYUG01	66	5002	4752	12/22/15	3/1/17	Contig	FDA	SAMN02699207	GCA_001478765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/765/GCA_001478765.1_Salmonella_enterica_CVM_N29377-SQ_v1.0	-	CVM N29377
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3947	65.6	-	MMZC01	14	4282	4115	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916241	GCA_001850875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/875/GCA_001850875.1_ASM185087v1	-	01-R1568
Escherichia coli LAU-EC5	1389416	PRJNA215779	215779	Proteobacteria	Gammaproteobacteria	5.31229	50.6	-	AYOG01	136	5637	5149	11/25/13	2/25/17	Contig	Lebanese American University	SAMN02470234	GCA_000498875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/875/GCA_000498875.2_LAU-EC5	24558252	LAU-EC5
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07584	39.6	-	FIBQ01	30	2277	2030	2/10/16	3/13/17	Contig	SC	SAMEA1973171	GCA_900057945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/945/GCA_900057945.1_10678_7_79	-	2690STDY5561787
Pseudomonas aeruginosa	287	PRJNA294726	294726	Proteobacteria	Gammaproteobacteria	6.06281	66.5	-	LZQG01	65	5770	5555	10/11/16	3/20/17	Scaffold	Technical University of Denmark	SAMN04029210	GCA_001756485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/485/GCA_001756485.1_ASM175648v1	-	PHLS08916
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.40501	57.4	-	FWIA01	33	5468	5194	3/29/17	4/3/17	Scaffold	SC	SAMEA3752693	GCA_900172455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/455/GCA_900172455.1_17870_6_41	-	VRES0611
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.51253	57.3	-	FWHY01	55	5570	5273	3/29/17	4/3/17	Scaffold	SC	SAMEA3752274	GCA_900172465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/465/GCA_900172465.1_17966_3_10	-	VRES0603
Pseudomonas aeruginosa	287	PRJNA311177	311177	Proteobacteria	Gammaproteobacteria	6.82948	66	-	LYTQ01	163	6625	6405	12/23/16	3/22/17	Scaffold	University Hospital of Besancon	SAMN04479286	GCA_001921005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/921/005/GCA_001921005.1_TRN6592	-	TRN6592
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07667	39.6	-	FICU01	31	2263	2031	2/10/16	3/8/17	Contig	SC	SAMEA2159904	GCA_900057955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/955/GCA_900057955.1_10702_5_31	-	2690STDY5561667
Escherichia coli GSK202U	1406818	PRJNA221787	221787	Proteobacteria	Gammaproteobacteria	4.43922	50.9	-	AXOB01	276	4534	4215	12/2/13	2/22/17	Contig	GlaxoSmithKline	SAMN02367289	GCA_000500815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/815/GCA_000500815.1_GSK202U	25348524	GSK202U
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3829	65.6	-	MMZB01	8	4258	4096	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916242	GCA_001850905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/905/GCA_001850905.1_ASM185090v1	-	02-R0028
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.92995	52.2	-	JYUI01	84	5062	4806	12/22/15	3/1/17	Contig	FDA	SAMN02699209	GCA_001478785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/785/GCA_001478785.1_Salmonella_enterica_CVM_N29379-SQ_v1.0	-	CVM N29379
Staphylococcus aureus F26051	1421833	PRJNA227813	227813	Terrabacteria group	Firmicutes	2.86372	32.7	-	JFUO01	64	3030	2852	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403123	GCA_000587755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/755/GCA_000587755.1_Stap_aure_F26051_V1	-	F26051
Staphylococcus aureus F26032	1421832	PRJNA227812	227812	Terrabacteria group	Firmicutes	2.93038	32.7	-	JFUP01	29	3120	2956	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403122	GCA_000587775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/775/GCA_000587775.1_Stap_aure_F26032_V1	-	F26032
Salmonella enterica subsp. enterica serovar Ohio	117541	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.69509	52.1	-	JYUJ01	73	4748	4505	12/22/15	3/1/17	Contig	FDA	SAMN02699210	GCA_001478795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/795/GCA_001478795.1_Salmonella_enterica_CVM_N29382-R_v1.0	-	CVM N29382
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38128	65.6	-	MMZA01	7	4270	4109	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916243	GCA_001850925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/925/GCA_001850925.1_ASM185092v1	-	01-R0897
Escherichia coli GSK2022	1406819	PRJNA221787	221787	Proteobacteria	Gammaproteobacteria	4.44077	50.9	-	AXOC01	248	4528	4217	12/2/13	2/22/17	Contig	GlaxoSmithKline	SAMN02367290	GCA_000500835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/835/GCA_000500835.1_GSK2022	25348524	GSK2022
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07607	39.6	-	FICV01	32	2280	2035	2/10/16	3/15/17	Contig	SC	SAMEA2158938	GCA_900057965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/965/GCA_900057965.1_10702_5_32	-	2690STDY5561689
Pseudomonas aeruginosa	287	PRJNA311177	311177	Proteobacteria	Gammaproteobacteria	6.81986	66.1	-	LYTR01	186	6622	6359	12/23/16	3/21/17	Scaffold	University Hospital of Besancon	SAMN04479287	GCA_001921015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/921/015/GCA_001921015.1_TRN6594	-	TRN6594
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.40383	57.4	-	FWIC01	34	5467	5191	3/29/17	4/3/17	Scaffold	SC	SAMEA3753145	GCA_900172475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/475/GCA_900172475.1_17870_6_42	-	VRES0612
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.40308	57.4	-	FWIB01	37	5466	5192	3/29/17	4/3/17	Scaffold	SC	SAMEA3752748	GCA_900172485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/485/GCA_900172485.1_17966_3_7	-	VRES0592
Pseudomonas aeruginosa	287	PRJNA311177	311177	Proteobacteria	Gammaproteobacteria	6.80236	66	-	LYTS01	159	6558	6295	12/23/16	3/22/17	Scaffold	University Hospital of Besancon	SAMN04479288	GCA_001921025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/921/025/GCA_001921025.1_TRN6598	-	TRN6598
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07651	39.6	-	FIEE01	32	2278	2026	2/10/16	3/13/17	Contig	SC	SAMEA2154004	GCA_900057975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/975/GCA_900057975.1_10702_5_69	-	2690STDY5561758
Escherichia coli GSK2023	1406820	PRJNA221787	221787	Proteobacteria	Gammaproteobacteria	4.44245	50.9	-	AXOD01	243	4534	4223	12/2/13	2/22/17	Contig	GlaxoSmithKline	SAMN02367291	GCA_000500855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/855/GCA_000500855.1_GSK2023	25348524	GSK2023
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38435	65.6	-	MMYX01	13	4262	4102	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916246	GCA_001850935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/935/GCA_001850935.1_ASM185093v1	-	01-R1528
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.90088	52	-	JYUK01	80	4986	4681	12/22/15	3/1/17	Contig	FDA	SAMN02699211	GCA_001478825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/825/GCA_001478825.1_Salmonella_enterica_CVM_N29383-SQ_v1.0	-	CVM N29383
Staphylococcus aureus F23613	1421831	PRJNA227811	227811	Terrabacteria group	Firmicutes	2.97111	32.7	-	JFUQ01	65	3155	2978	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403121	GCA_000587795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/795/GCA_000587795.1_Stap_aure_F23613_V1	-	F23613
Staphylococcus aureus F23610	1421830	PRJNA227810	227810	Terrabacteria group	Firmicutes	2.92503	32.8	-	JFUR01	57	3072	2920	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403120	GCA_000587815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/815/GCA_000587815.1_Stap_aure_F23610_V1	-	F23610
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.69796	52.1	-	JYUL01	48	4815	4560	12/22/15	3/1/17	Contig	FDA	SAMN02699212	GCA_001478845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/845/GCA_001478845.1_Salmonella_enterica_CVM_N29385-SQ_v1.0	-	CVM N29385
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40723	65.6	-	MMYZ01	5	4284	4131	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916244	GCA_001850965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/965/GCA_001850965.1_ASM185096v1	-	02-R0870
Escherichia coli GSK2024	1406821	PRJNA221787	221787	Proteobacteria	Gammaproteobacteria	4.44076	50.9	-	AXOE01	255	4526	4217	12/2/13	2/22/17	Contig	GlaxoSmithKline	SAMN02367292	GCA_000500875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/875/GCA_000500875.1_GSK2024	25348524	GSK2024
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07304	39.6	-	FHYT01	41	2270	2024	2/10/16	3/13/17	Contig	SC	SAMEA2161668	GCA_900058205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/205/GCA_900058205.1_10678_6_88	-	2690STDY5561798
Pseudomonas aeruginosa	287	PRJNA311177	311177	Proteobacteria	Gammaproteobacteria	6.73513	66.1	-	LYTT01	137	6423	6194	12/23/16	3/22/17	Scaffold	University Hospital of Besancon	SAMN04479290	GCA_001921065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/921/065/GCA_001921065.1_TRN6601	-	TRN6601
Klebsiella pneumoniae	573	PRJEB8776	304699	Proteobacteria	Gammaproteobacteria	5.4041	57.4	-	FWIH01	35	5467	5191	3/29/17	4/3/17	Scaffold	SC	SAMEA3752687	GCA_900172495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/495/GCA_900172495.1_17966_3_9	-	VRES0566
Klebsiella pneumoniae	573	PRJEB8766	291369	Proteobacteria	Gammaproteobacteria	5.55758	57.5	-	FWID01	51	5585	5252	3/29/17	4/3/17	Scaffold	SC	SAMEA3531564	GCA_900172505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/505/GCA_900172505.1_18090_4_53	-	VRCO0013
Pseudomonas aeruginosa	287	PRJNA311177	311177	Proteobacteria	Gammaproteobacteria	6.7362	66.1	-	LYTU01	153	6529	6286	12/23/16	3/22/17	Scaffold	University Hospital of Besancon	SAMN04479356	GCA_001921085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/921/085/GCA_001921085.1_TRN6609	-	TRN6609
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07631	39.6	-	FICD01	34	2276	2029	2/10/16	3/13/17	Contig	SC	SAMEA2161720	GCA_900058215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/215/GCA_900058215.1_10702_5_14	-	2690STDY5561672
Escherichia coli GSK202B	1406817	PRJNA221787	221787	Proteobacteria	Gammaproteobacteria	4.4416	50.9	-	AXOA01	267	4532	4214	12/2/13	2/22/17	Contig	GlaxoSmithKline	SAMN02367288	GCA_000500895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/500/895/GCA_000500895.1_GSK202B	25348524	GSK202B
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34936	65.6	-	MMYW01	11	4241	4079	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916247	GCA_001851005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/005/GCA_001851005.1_ASM185100v1	-	02-R0855
"Salmonella enterica subsp. enterica serovar 4,12:d:-"	1620418	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.07782	51.6	-	JYUO01	133	5210	4921	12/22/15	3/1/17	Contig	FDA	SAMN02699215	GCA_001478855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/855/GCA_001478855.1_Salmonella_enterica_CVM_N30650-SQ_v1.0	-	CVM N30650
Staphylococcus aureus F22648	1421829	PRJNA227809	227809	Terrabacteria group	Firmicutes	2.85709	32.7	-	JFUS01	45	2991	2868	3/11/14	3/3/17	Scaffold	Broad Institute	SAMN02403119	GCA_000587835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/587/835/GCA_000587835.1_Stap_aure_F22648_V1	-	F22648
Staphylococcus aureus W53395	1417037	PRJNA226788	226788	Terrabacteria group	Firmicutes	2.79342	32.8	-	JGII01	121	2912	2756	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02398729	GCA_000604485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/485/GCA_000604485.1_Stap_aure_W53395_V1	-	W53395
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.00823	52.1	-	JYUP01	87	5147	4882	12/22/15	3/1/17	Contig	FDA	SAMN02699216	GCA_001478885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/885/GCA_001478885.1_Salmonella_enterica_CVM_N30655-SQ_v1.0	-	CVM N30655
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39846	65.6	-	MMYV01	9	4280	4109	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916248	GCA_001851025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/025/GCA_001851025.1_ASM185102v1	-	02-R0383
Escherichia coli 897	1411692	PRJNA224139	224139	Proteobacteria	Gammaproteobacteria	5.18695	50.7	-	AYQF01	424	5457	5061	12/3/13	2/22/17	Contig	University Medical Center Utrecht	SAMN02471478	GCA_000503255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/255/GCA_000503255.1_Ecoli897	-	897
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07732	39.6	-	FICW01	38	2270	2028	2/10/16	3/13/17	Contig	SC	SAMEA1964141	GCA_900058225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/225/GCA_900058225.1_10702_5_33	-	2690STDY5561688
Pseudomonas aeruginosa	287	PRJNA311177	311177	Proteobacteria	Gammaproteobacteria	6.8407	65.9	-	LYTV01	178	6577	6256	12/23/16	3/22/17	Scaffold	University Hospital of Besancon	SAMN04479357	GCA_001921095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/921/095/GCA_001921095.1_TRN6622	-	TRN6622
Klebsiella pneumoniae	573	PRJEB8766	291369	Proteobacteria	Gammaproteobacteria	5.64165	57.5	-	FWIE01	42	5664	5356	3/29/17	4/3/17	Scaffold	SC	SAMEA3531565	GCA_900172515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/515/GCA_900172515.1_18090_4_54	-	VRCO0023
Klebsiella pneumoniae	573	PRJEB8766	291369	Proteobacteria	Gammaproteobacteria	5.6974	57	-	FWIF01	149	5854	5422	3/29/17	4/3/17	Scaffold	SC	SAMEA3531566	GCA_900172525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/525/GCA_900172525.1_18090_4_55	-	VRCO0024
Pseudomonas aeruginosa	287	PRJNA311177	311177	Proteobacteria	Gammaproteobacteria	7.06864	65.9	-	LYTW01	363	6823	6460	12/23/16	3/21/17	Scaffold	University Hospital of Besancon	SAMN04479358	GCA_001921105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/921/105/GCA_001921105.1_TRN6633	-	TRN6633
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07578	39.6	-	FIDJ01	34	2282	2027	2/10/16	3/15/17	Contig	SC	SAMEA2152004	GCA_900058235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/235/GCA_900058235.1_10702_5_47	-	2690STDY5561708
Escherichia coli 1365	1411697	PRJNA224154	224154	Proteobacteria	Gammaproteobacteria	5.0628	50.7	-	AYQK01	304	5289	4970	12/3/13	2/22/17	Contig	University Medical Center Utrecht	SAMN02471498	GCA_000503275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/275/GCA_000503275.1_Ecoli1365	-	1365
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40622	65.6	-	MMYT01	4	4282	4130	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916250	GCA_001851035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/035/GCA_001851035.1_ASM185103v1	-	01-R1446
Salmonella enterica subsp. enterica serovar Senftenberg	28150	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.01804	51.9	-	JYUQ01	85	5145	4875	12/22/15	3/1/17	Contig	FDA	SAMN02699217	GCA_001478905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/905/GCA_001478905.1_Salmonella_enterica_CVM_N30663-SQ_v1.0	-	CVM N30663
Staphylococcus aureus M32567	1417060	PRJNA226811	226811	Terrabacteria group	Firmicutes	2.77149	32.9	-	JGIJ01	160	2904	2704	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02398752	GCA_000604505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/505/GCA_000604505.1_Stap_aure_M32567_V1	-	M32567
Staphylococcus aureus F63712	1417061	PRJNA226812	226812	Terrabacteria group	Firmicutes	2.9188	32.8	-	JGIK01	46	3118	2931	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02398753	GCA_000604525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/525/GCA_000604525.1_Stap_aure_F63712_V1	-	F63712
Salmonella enterica subsp. enterica serovar Montevideo	115981	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.83367	52.2	-	JYUR01	67	4982	4731	12/22/15	3/1/17	Contig	FDA	SAMN02699218	GCA_001478915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/915/GCA_001478915.1_Salmonella_enterica_CVM_N30669-SQ_v1.0	-	CVM N30669
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38195	65.6	-	MMYU01	14	4263	4094	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916249	GCA_001851045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/045/GCA_001851045.1_ASM185104v1	-	02-R1665
Escherichia coli 38.16	1411698	PRJNA224188	224188	Proteobacteria	Gammaproteobacteria	4.97429	50.7	-	AYQL01	267	5160	4859	12/3/13	2/22/17	Contig	University Medical Center Utrecht	SAMN02471507	GCA_000503295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/295/GCA_000503295.1_Ecoli38.16	-	38.16
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.0763	39.6	-	FHXV01	28	2279	2030	2/10/16	3/8/17	Contig	SC	SAMEA2161978	GCA_900058445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/445/GCA_900058445.1_10678_6_53	-	2690STDY5561907
Pseudomonas aeruginosa	287	PRJNA311177	311177	Proteobacteria	Gammaproteobacteria	6.88126	66	-	LYTX01	210	6693	6360	12/23/16	3/22/17	Scaffold	University Hospital of Besancon	SAMN04479395	GCA_001921125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/921/125/GCA_001921125.1_TRN6635	-	TRN6635
Klebsiella pneumoniae	573	PRJEB8766	291369	Proteobacteria	Gammaproteobacteria	5.86591	57.4	-	FWIG01	108	6017	5581	3/29/17	4/3/17	Scaffold	SC	SAMEA3531567	GCA_900172535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/535/GCA_900172535.1_18090_4_56	-	VRCO0026
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.58684	56.9	-	FWII01	76	5564	5244	3/29/17	4/3/17	Scaffold	SC	SAMEA4370521	GCA_900172545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/545/GCA_900172545.1_20794_7_104	-	VRES1073
Pseudomonas aeruginosa	287	PRJNA311177	311177	Proteobacteria	Gammaproteobacteria	7.10958	65.8	-	LYTY01	352	6885	6488	12/23/16	3/22/17	Scaffold	University Hospital of Besancon	SAMN04479396	GCA_001921165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/921/165/GCA_001921165.1_TRN6637	-	TRN6637
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07668	39.6	-	FIAS01	37	2278	2029	2/10/16	3/13/17	Contig	SC	SAMEA1969957	GCA_900058455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/455/GCA_900058455.1_10678_7_55	-	2690STDY5561915
Escherichia coli 320	1412816	PRJNA224195	224195	Proteobacteria	Gammaproteobacteria	5.07318	50.7	-	AYQM01	289	5251	4974	12/3/13	2/22/17	Contig	University Medical Center Utrecht	SAMN02471480	GCA_000503315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/315/GCA_000503315.1_Ecoli320	-	320
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3596	65.6	-	MMYS01	2	4249	4083	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916251	GCA_001851085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/085/GCA_001851085.1_ASM185108v1	-	02-R0281
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.07907	51.8	-	JYUS01	84	5227	4947	12/22/15	3/1/17	Contig	FDA	SAMN02699219	GCA_001478945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/945/GCA_001478945.1_Salmonella_enterica_CVM_N30671-SQ_v1.0	-	CVM N30671
Staphylococcus aureus M32669	1417062	PRJNA226813	226813	Terrabacteria group	Firmicutes	2.87551	32.8	-	JGIL01	51	3034	2835	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02398754	GCA_000604545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/545/GCA_000604545.1_Stap_aure_M32669_V1	-	M32669
Staphylococcus aureus M35954	1417074	PRJNA226825	226825	Terrabacteria group	Firmicutes	2.83898	32.9	-	JGIM01	137	2995	2786	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02398766	GCA_000604565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/565/GCA_000604565.1_Stap_aure_M35954_V1	-	M35954
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.89581	52.1	-	JYUU01	71	5051	4798	12/22/15	3/1/17	Contig	FDA	SAMN02699221	GCA_001478965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/965/GCA_001478965.1_Salmonella_enterica_CVM_N30677-SQ_v1.0	-	CVM N30677
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39298	65.6	-	MMYQ01	5	4262	4101	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916253	GCA_001851105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/105/GCA_001851105.1_ASM185110v1	-	01-R1630
Escherichia coli 681	1412817	PRJNA224196	224196	Proteobacteria	Gammaproteobacteria	5.05173	50.7	-	AYQN01	285	5223	4936	12/3/13	2/22/17	Contig	University Medical Center Utrecht	SAMN02471490	GCA_000503335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/335/GCA_000503335.1_Ecoli681	-	681
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.01764	39.6	-	FIXJ01	32	2218	2003	2/10/16	3/13/17	Contig	SC	SAMEA1033651	GCA_900058535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/535/GCA_900058535.1_7004_3_53	-	C12879a
Pseudomonas aeruginosa	287	PRJNA311177	311177	Proteobacteria	Gammaproteobacteria	6.88806	65.9	-	LYTZ01	161	6640	6373	12/23/16	3/22/17	Scaffold	University Hospital of Besancon	SAMN04479397	GCA_001921175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/921/175/GCA_001921175.1_TRN6649	-	TRN6649
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.47691	57.2	-	FWJC01	37	5550	5275	3/29/17	4/3/17	Scaffold	SC	SAMEA4370517	GCA_900172555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/555/GCA_900172555.1_20794_7_100	-	VRES0983
Klebsiella pneumoniae	573	PRJEB8766	291369	Proteobacteria	Gammaproteobacteria	5.57415	57	-	FWIP01	57	5646	5376	3/29/17	4/3/17	Scaffold	SC	SAMEA3531574	GCA_900172565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/565/GCA_900172565.1_18090_4_63	-	VRCO0077
Pseudomonas aeruginosa	287	PRJNA369567	369567	Proteobacteria	Gammaproteobacteria	6.31224	66.5	-	MULB01	51	6009	5824	2/8/17	3/22/17	Scaffold	SCH	SAMN06289374	GCA_001990325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/325/GCA_001990325.1_ASM199032v1	-	SCH_ABX16
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07679	39.6	-	FICE01	29	2269	2029	2/10/16	3/13/17	Contig	SC	SAMEA2153095	GCA_900058675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/675/GCA_900058675.1_10702_5_16	-	2690STDY5561692
Escherichia coli 38.27	1412818	PRJNA224199	224199	Proteobacteria	Gammaproteobacteria	5.15545	50.3	-	AYQO01	479	5459	5085	12/3/13	2/22/17	Contig	University Medical Center Utrecht	SAMN02471493	GCA_000503355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/355/GCA_000503355.1_Ecoli38.27	-	38.27
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39224	65.6	-	MMYR01	4	4271	4106	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916252	GCA_001851115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/115/GCA_001851115.1_ASM185111v1	-	01-R1620
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.22986	51.8	-	JYUW01	105	5418	5138	12/22/15	3/1/17	Contig	FDA	SAMN02699223	GCA_001478975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/478/975/GCA_001478975.1_Salmonella_enterica_CVM_N30683-SQ_v1.0	-	CVM N30683
Staphylococcus aureus F12915	1417128	PRJNA226879	226879	Terrabacteria group	Firmicutes	2.8391	32.8	-	JGIN01	101	2973	2797	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02398820	GCA_000604585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/585/GCA_000604585.1_Stap_aure_F12915_V1	-	F12915
Staphylococcus aureus F12917	1417129	PRJNA226880	226880	Terrabacteria group	Firmicutes	2.84953	32.8	-	JGIO01	81	2964	2811	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02398821	GCA_000604605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/605/GCA_000604605.1_Stap_aure_F12917_V1	-	F12917
Salmonella enterica subsp. enterica serovar Senftenberg	28150	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.05476	51.9	-	JYUX01	186	5198	4890	12/22/15	3/1/17	Contig	FDA	SAMN02699224	GCA_001479005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/005/GCA_001479005.1_Salmonella_enterica_CVM_N30685-SQ_v1.0	-	CVM N30685
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39554	65.6	-	MMYP01	11	4277	4099	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916254	GCA_001851125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/125/GCA_001851125.1_ASM185112v1	-	01-R1622
Escherichia coli 38.34	1412819	PRJNA224200	224200	Proteobacteria	Gammaproteobacteria	5.26606	50.3	-	AYQP01	567	5639	5262	12/3/13	2/22/17	Contig	University Medical Center Utrecht	SAMN02471508	GCA_000503375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/375/GCA_000503375.1_Ecoli38.34	-	38.34
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07724	39.6	-	FHWH01	35	2269	2033	2/10/16	3/13/17	Contig	SC	SAMEA2160782	GCA_900059015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/015/GCA_900059015.1_10678_6_13	-	2690STDY5561912
Pseudomonas aeruginosa	287	PRJNA369567	369567	Proteobacteria	Gammaproteobacteria	6.58204	66.3	-	MUKZ01	91	6235	5972	2/8/17	3/22/17	Scaffold	SCH	SAMN06289376	GCA_001990335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/335/GCA_001990335.1_ASM199033v1	-	SCH_ABX18
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.43455	57.4	-	FWIX01	50	5493	5202	3/29/17	5/22/17	Scaffold	SC	SAMEA4370529	GCA_900172575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/575/GCA_900172575.1_20794_7_112	-	VRES1171
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.59327	56.9	-	FWIK01	73	5594	5274	3/29/17	4/3/17	Scaffold	SC	SAMEA4370524	GCA_900172585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/585/GCA_900172585.1_20794_7_107	-	VRES1076
Pseudomonas aeruginosa	287	PRJNA369567	369567	Proteobacteria	Gammaproteobacteria	6.50356	66.4	-	MULA01	83	6158	6006	2/8/17	3/22/17	Scaffold	SCH	SAMN06289375	GCA_001990375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/375/GCA_001990375.1_ASM199037v1	-	SCH_ABX17
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07551	39.6	-	FHYP01	37	2275	2028	2/10/16	3/8/17	Contig	SC	SAMEA2144237	GCA_900059025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/025/GCA_900059025.1_10678_6_79	-	2690STDY5561895
Escherichia coli 53A	1412820	PRJNA224201	224201	Proteobacteria	Gammaproteobacteria	4.85807	50.7	-	AYQQ01	233	5102	4793	12/3/13	2/22/17	Contig	University Medical Center Utrecht	SAMN02471484	GCA_000503395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/395/GCA_000503395.1_Ecoli53A	-	53A
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3957	65.6	-	MMYO01	12	4277	4106	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916255	GCA_001851135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/135/GCA_001851135.1_ASM185113v1	-	02-R1625
Salmonella enterica subsp. enterica serovar Agona	58095	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.76087	52	-	JYVA01	86	4827	4575	12/22/15	3/1/17	Contig	FDA	SAMN02699227	GCA_001479025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/025/GCA_001479025.1_Salmonella_enterica_CVM_N30701-SQ_v1.0	-	CVM N30701
Staphylococcus aureus F19466	1417135	PRJNA226886	226886	Terrabacteria group	Firmicutes	2.8336	32.8	-	JGIP01	139	2958	2808	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02398827	GCA_000604625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/625/GCA_000604625.1_Stap_aure_F19466_V1	-	F19466
Staphylococcus aureus F29450_091412	1417140	PRJNA226892	226892	Terrabacteria group	Firmicutes	2.74429	32.8	-	JGIQ01	157	2867	2643	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02398832	GCA_000604645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/645/GCA_000604645.1_Stap_aure_F29450_091412_V1	-	F29450_091412
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.71389	52.1	-	JYVC01	37	4818	4574	12/22/15	3/1/17	Contig	FDA	SAMN02699229	GCA_001479035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/035/GCA_001479035.1_Salmonella_enterica_CVM_N31380-SQ_v1.0	-	CVM N31380
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39224	65.6	-	MMYM01	2	4260	4102	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916257	GCA_001851185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/185/GCA_001851185.1_ASM185118v1	-	02-R1672
Escherichia coli 85B	1412821	PRJNA224202	224202	Proteobacteria	Gammaproteobacteria	5.07182	50.3	-	AYQR01	363	5395	5034	12/3/13	2/22/17	Contig	University Medical Center Utrecht	SAMN02471491	GCA_000503415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/415/GCA_000503415.1_Ecoli85B	-	85B
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07592	39.6	-	FHZN01	33	2280	2027	2/10/16	3/6/17	Contig	SC	SAMEA2146871	GCA_900059035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/035/GCA_900059035.1_10678_7_26	-	2690STDY5561677
Pseudomonas aeruginosa	287	PRJNA369567	369567	Proteobacteria	Gammaproteobacteria	6.77725	66.2	-	MULF01	79	6531	6349	2/8/17	3/22/17	Scaffold	SCH	SAMN06289370	GCA_001990405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/405/GCA_001990405.1_ASM199040v1	-	SCH_ABX12
Klebsiella pneumoniae	573	PRJEB8770	293295	Proteobacteria	Gammaproteobacteria	5.45575	57.8	-	FWIJ01	29	5462	5158	3/29/17	4/3/17	Scaffold	SC	SAMEA3531616	GCA_900172595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/595/GCA_900172595.1_18090_6_32	-	VRES0419
Klebsiella pneumoniae	573	PRJEB8770	293295	Proteobacteria	Gammaproteobacteria	5.92047	56.5	-	FWIL01	126	6038	5704	3/29/17	4/3/17	Scaffold	SC	SAMEA3531615	GCA_900172605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/605/GCA_900172605.1_18090_6_31	-	VRES0216
Pseudomonas aeruginosa	287	PRJNA369567	369567	Proteobacteria	Gammaproteobacteria	6.81917	66.2	-	MULD01	54	6511	6348	2/8/17	3/22/17	Scaffold	SCH	SAMN06289372	GCA_001990445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/445/GCA_001990445.1_ASM199044v1	-	SCH_ABX14
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07823	39.6	-	FHZO01	29	2291	2040	2/10/16	3/15/17	Contig	SC	SAMEA2149678	GCA_900059045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/045/GCA_900059045.1_10678_7_28	-	2690STDY5561748
Escherichia coli 328	1412822	PRJNA224204	224204	Proteobacteria	Gammaproteobacteria	5.41701	50.6	-	AYQS01	368	5739	5425	12/3/13	2/22/17	Contig	University Medical Center Utrecht	SAMN02471494	GCA_000503435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/435/GCA_000503435.1_Ecoli328	-	328
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39431	65.6	-	MMYN01	5	4269	4104	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916256	GCA_001851195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/195/GCA_001851195.1_ASM185119v1	-	03-R0240
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.00717	52	-	JYVE01	101	5160	4889	12/22/15	3/1/17	Contig	FDA	SAMN02699231	GCA_001479065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/065/GCA_001479065.1_Salmonella_enterica_CVM_N31392-SQ_v1.0	-	CVM N31392
Staphylococcus aureus H72119	1417173	PRJNA226927	226927	Terrabacteria group	Firmicutes	2.93655	32.7	-	JGIR01	26	3118	2946	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02398865	GCA_000604665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/665/GCA_000604665.1_Stap_aure_H72119_V1	-	H72119
Staphylococcus aureus S29036	1417189	PRJNA226943	226943	Terrabacteria group	Firmicutes	2.86331	32.8	-	JGIS01	110	3042	2842	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02398881	GCA_000604685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/685/GCA_000604685.1_Stap_aure_S29036_V1	-	S29036
Salmonella enterica subsp. enterica serovar Agona	58095	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.89236	52	-	JYVF01	98	4987	4737	12/22/15	3/1/17	Contig	FDA	SAMN02699232	GCA_001479085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/085/GCA_001479085.1_Salmonella_enterica_CVM_N31394-SQ_v1.0	-	CVM N31394
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39149	65.6	-	MMYL01	1	4259	4104	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916258	GCA_001851205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/205/GCA_001851205.1_ASM185120v1	-	02-R0990
Escherichia coli 435	1412823	PRJNA224205	224205	Proteobacteria	Gammaproteobacteria	5.37952	50.4	-	AYQT01	558	5619	5181	12/3/13	2/22/17	Contig	University Medical Center Utrecht	SAMN02471509	GCA_000503455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/455/GCA_000503455.1_Ecoli435	-	435
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.0773	39.6	-	FIAY01	31	2285	2039	2/10/16	3/13/17	Contig	SC	SAMEA2162750	GCA_900059055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/055/GCA_900059055.1_10678_7_61	-	2690STDY5561921
Pseudomonas aeruginosa	287	PRJNA369567	369567	Proteobacteria	Gammaproteobacteria	6.81859	66.2	-	MULE01	60	6521	6346	2/8/17	3/22/17	Scaffold	SCH	SAMN06289371	GCA_001990525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/525/GCA_001990525.1_ASM199052v1	-	SCH_ABX13
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.59812	56.9	-	FWIQ01	63	5611	5277	3/29/17	4/3/17	Scaffold	SC	SAMEA4370526	GCA_900172615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/615/GCA_900172615.1_20794_7_109	-	VRES1078
Klebsiella pneumoniae	573	PRJEB8766	291369	Proteobacteria	Gammaproteobacteria	5.59121	57.2	-	FWIT01	63	5690	5382	3/29/17	4/3/17	Scaffold	SC	SAMEA3531577	GCA_900172625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/625/GCA_900172625.1_18090_4_66	-	VRCO0118
Pseudomonas aeruginosa	287	PRJNA341407	341407	Proteobacteria	Gammaproteobacteria	6.76138	66.2	-	MTGC01	205	6518	6262	2/13/17	2/22/17	Scaffold	California Department of Public Health	SAMN05721778	GCA_001997195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/195/GCA_001997195.1_ASM199719v1	-	ATCC 27853
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07475	39.6	-	FIBA01	36	2276	2031	2/10/16	3/15/17	Contig	SC	SAMEA2143237	GCA_900059065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/065/GCA_900059065.1_10678_7_64	-	2690STDY5561773
Escherichia coli 597	1412824	PRJNA224228	224228	Proteobacteria	Gammaproteobacteria	5.00265	50.6	-	AYQU01	202	5165	4867	12/3/13	2/22/17	Contig	University Medical Center Utrecht	SAMN02471510	GCA_000503475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/475/GCA_000503475.1_Ecoli597	-	597
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40052	65.6	-	MMYJ01	4	4272	4112	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916260	GCA_001851265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/265/GCA_001851265.1_ASM185126v1	-	01-R1401
Salmonella enterica subsp. enterica serovar Senftenberg	28150	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.82443	52	-	JYVI01	59	4901	4652	12/22/15	3/1/17	Contig	FDA	SAMN02699235	GCA_001479095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/095/GCA_001479095.1_Salmonella_enterica_CVM_N31402-SQ_v1.0	-	CVM N31402
Staphylococcus aureus T28653	1417199	PRJNA226953	226953	Terrabacteria group	Firmicutes	2.92497	32.8	-	JGIT01	44	3051	2906	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02398891	GCA_000604705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/705/GCA_000604705.1_Stap_aure_T28653_V1	-	T28653
Staphylococcus aureus T35615	1417204	PRJNA226958	226958	Terrabacteria group	Firmicutes	2.86799	32.8	-	JGIU01	53	3047	2850	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02398896	GCA_000604725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/725/GCA_000604725.1_Stap_aure_T35615_V1	-	T35615
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.06229	52.1	-	JYVJ01	113	5198	4943	12/22/15	3/1/17	Contig	FDA	SAMN02699236	GCA_001479125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/125/GCA_001479125.1_Salmonella_enterica_CVM_N31409-SQ_v1.0	-	CVM N31409
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39831	65.6	-	MMYH01	10	4275	4082	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916262	GCA_001851275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/275/GCA_001851275.1_ASM185127v1	-	02-R1686
Escherichia coli 606	1412825	PRJNA224229	224229	Proteobacteria	Gammaproteobacteria	5.27905	50.6	-	AYQV01	504	5605	5219	12/3/13	2/22/17	Contig	University Medical Center Utrecht	SAMN02471485	GCA_000503495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/495/GCA_000503495.1_Ecoli606	-	606
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07763	39.6	-	FIAG01	31	2280	2031	2/10/16	3/13/17	Contig	SC	SAMEA2151928	GCA_900059385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/385/GCA_900059385.1_10678_7_48	-	2690STDY5561694
Pseudomonas aeruginosa	287	PRJNA369567	369567	Proteobacteria	Gammaproteobacteria	6.61027	66.3	-	MVBT01	80	6304	6127	2/16/17	3/22/17	Scaffold	SCH	SAMN06289362	GCA_002001305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/305/GCA_002001305.1_ASM200130v1	-	SCH_ABX04
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.59179	56.9	-	FWIM01	76	5578	5257	3/29/17	4/3/17	Scaffold	SC	SAMEA4370525	GCA_900172645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/645/GCA_900172645.1_20794_7_108	-	VRES1077
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.56747	56.9	-	FWJB01	97	5547	5228	3/29/17	4/3/17	Scaffold	SC	SAMEA4370523	GCA_900172655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/655/GCA_900172655.1_20794_7_106	-	VRES1075
Pseudomonas aeruginosa	287	PRJNA381373	381373	Proteobacteria	Gammaproteobacteria	7.20211	65.5	-	NBVZ01	102	7081	6820	4/17/17	4/21/17	Scaffold	Beijing Advanced Innovation Center for Food Nutrition and Human Health	SAMN06675399	GCA_002094805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/805/GCA_002094805.1_ASM209480v1	-	DZ-B1
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07516	39.6	-	FICX01	32	2280	2031	2/10/16	3/15/17	Contig	SC	SAMEA2145978	GCA_900059395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/395/GCA_900059395.1_10702_5_35	-	2690STDY5561719
Escherichia coli 668	1412826	PRJNA224230	224230	Proteobacteria	Gammaproteobacteria	5.14733	50.6	-	AYQW01	296	5278	5013	12/3/13	2/22/17	Contig	University Medical Center Utrecht	SAMN02471481	GCA_000503515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/515/GCA_000503515.1_Ecoli668	-	668
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38013	65.6	-	MMYI01	8	4263	4083	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916261	GCA_001851295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/295/GCA_001851295.1_ASM185129v1	-	02-R0850
Salmonella enterica subsp. enterica serovar Anatum	58712	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.74273	52.2	-	JYVK01	68	4820	4600	12/22/15	3/1/17	Contig	FDA	SAMN02699237	GCA_001479145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/145/GCA_001479145.1_Salmonella_enterica_CVM_N31410-R_v1.0	-	CVM N31410
Staphylococcus aureus W86059	1417221	PRJNA226975	226975	Terrabacteria group	Firmicutes	2.7858	32.8	-	JGIV01	58	2918	2759	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02398913	GCA_000604745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/745/GCA_000604745.1_Stap_aure_W86059_V1	-	W86059
Staphylococcus aureus F42556	1418282	PRJNA227571	227571	Terrabacteria group	Firmicutes	2.77611	32.7	-	JGIW01	34	2875	2702	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402495	GCA_000604765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/765/GCA_000604765.1_Stap_aure_F42556_V1	-	F42556
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.93828	52.1	-	JYVL01	118	5078	4796	12/22/15	3/1/17	Contig	FDA	SAMN02699238	GCA_001479155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/155/GCA_001479155.1_Salmonella_enterica_CVM_N31411-SQ_v1.0	-	CVM N31411
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38139	65.6	-	MMYG01	3	4254	4095	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916263	GCA_001851325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/325/GCA_001851325.1_ASM185132v1	-	01-R1139
Escherichia coli 1A	1412827	PRJNA224231	224231	Proteobacteria	Gammaproteobacteria	5.07613	50.5	-	AYQX01	437	5352	5039	12/3/13	2/22/17	Contig	University Medical Center Utrecht	SAMN02471495	GCA_000503535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/535/GCA_000503535.1_Ecoli1A	-	1A
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07492	39.6	-	FIDB01	30	2269	2028	2/10/16	3/13/17	Contig	SC	SAMEA2158810	GCA_900059405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/405/GCA_900059405.1_10702_5_39	-	2690STDY5561720
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	6.9691	65.8	-	NFFI01	207	6694	6443	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761160	GCA_002135615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/615/GCA_002135615.1_ASM213561v1	-	S811_C17_BS
Klebsiella pneumoniae	573	PRJEB8766	291369	Proteobacteria	Gammaproteobacteria	5.52744	57.2	-	FWIW01	114	5676	5354	3/29/17	4/3/17	Scaffold	SC	SAMEA3531572	GCA_900172665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/665/GCA_900172665.1_18090_4_61	-	VRCO0048
Klebsiella pneumoniae	573	PRJEB8766	291369	Proteobacteria	Gammaproteobacteria	5.58194	57.3	-	FWJA01	45	5581	5307	3/29/17	4/3/17	Scaffold	SC	SAMEA3531573	GCA_900172675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/675/GCA_900172675.1_18090_4_62	-	VRCO0062
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	7.04986	65.7	-	NFFE01	155	6792	6530	5/15/17	5/24/17	Scaffold	Pseudomonas Italian work group	SAMN06761164	GCA_002135625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/625/GCA_002135625.1_ASM213562v1	-	S829_C17_RS
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07514	39.6	-	FHWE01	34	2274	2023	2/10/16	3/12/17	Contig	SC	SAMEA1971418	GCA_900059715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/715/GCA_900059715.1_10678_6_1	-	2690STDY5561662
Escherichia coli 9B	1412828	PRJNA224232	224232	Proteobacteria	Gammaproteobacteria	5.35437	50.6	-	AYQY01	570	5655	5263	12/3/13	2/22/17	Contig	University Medical Center Utrecht	SAMN02471492	GCA_000503555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/555/GCA_000503555.1_Ecoli9B	-	9B
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35869	65.6	-	MMYF01	4	4238	4080	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916264	GCA_001851345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/345/GCA_001851345.1_ASM185134v1	-	02-R1044
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.67355	52.2	-	JYVM01	87	4738	4508	12/22/15	3/1/17	Contig	FDA	SAMN02699239	GCA_001479185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/185/GCA_001479185.1_Salmonella_enterica_CVM_N31412-SQ_v1.0	-	CVM N31412
Staphylococcus aureus F42568	1418284	PRJNA227573	227573	Terrabacteria group	Firmicutes	2.83296	32.8	-	JGIX01	40	2975	2816	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402497	GCA_000604785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/785/GCA_000604785.1_Stap_aure_F42568_V1	-	F42568
Staphylococcus aureus F42579	1418285	PRJNA227574	227574	Terrabacteria group	Firmicutes	2.83478	32.8	-	JGIY01	38	2963	2787	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402498	GCA_000604805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/805/GCA_000604805.1_Stap_aure_F42579_V1	-	F42579
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.96617	51.9	-	JYVO01	119	5078	4811	12/22/15	3/1/17	Contig	FDA	SAMN02699241	GCA_001479205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/205/GCA_001479205.1_Salmonella_enterica_CVM_N31415-SQ_v1.0	-	CVM N31415
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39133	65.6	-	MMYE01	2	4258	4101	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916265	GCA_001851365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/365/GCA_001851365.1_ASM185136v1	-	02-R1947
Escherichia coli 27A	1412829	PRJNA224233	224233	Proteobacteria	Gammaproteobacteria	5.09148	50.5	-	AYQZ01	370	5336	5002	12/3/13	2/22/17	Contig	University Medical Center Utrecht	SAMN02471482	GCA_000503575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/575/GCA_000503575.1_Ecoli27A	-	27A
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07515	39.6	-	FHWF01	31	2282	2033	2/10/16	3/12/17	Contig	SC	SAMEA2150198	GCA_900059725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/725/GCA_900059725.1_10678_6_10	-	2690STDY5561859
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	6.93563	66	-	NFFG01	146	6674	6438	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761162	GCA_002135635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/635/GCA_002135635.1_ASM213563v1	-	S823_C17_RS
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.57129	56.9	-	FWIS01	95	5534	5207	3/29/17	4/3/17	Scaffold	SC	SAMEA4370522	GCA_900172685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/685/GCA_900172685.1_20794_7_105	-	VRES1074
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.4377	57.4	-	FWJD01	51	5496	5225	3/29/17	4/3/17	Scaffold	SC	SAMEA4370530	GCA_900172695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/695/GCA_900172695.1_20794_7_113	-	VRES1175
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	7.1547	65.8	-	NFFJ01	246	7044	6765	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761159	GCA_002135675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/675/GCA_002135675.1_ASM213567v1	-	S794_C17_BS
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07593	39.6	-	FIDL01	33	2276	2033	2/10/16	3/6/17	Contig	SC	SAMEA2145391	GCA_900059735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/735/GCA_900059735.1_10702_5_48	-	2690STDY5561690
Escherichia coli 53C	1412830	PRJNA224234	224234	Proteobacteria	Gammaproteobacteria	5.36261	50.6	-	AYRA01	442	5632	5258	12/3/13	2/22/17	Contig	University Medical Center Utrecht	SAMN02471496	GCA_000503595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/595/GCA_000503595.1_Ecoli53C	-	53C
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.396	65.6	-	MMYC01	12	4278	4108	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916267	GCA_001851385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/385/GCA_001851385.1_ASM185138v1	-	01-R1238
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.69752	52.2	-	JYVP01	47	4763	4549	12/22/15	3/1/17	Contig	FDA	SAMN02699242	GCA_001479215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/215/GCA_001479215.1_Salmonella_enterica_CVM_N31593-SQ_v1.0	-	CVM N31593
Staphylococcus aureus F42580	1418286	PRJNA227575	227575	Terrabacteria group	Firmicutes	2.83591	32.8	-	JGIZ01	40	2947	2782	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402499	GCA_000604825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/825/GCA_000604825.1_Stap_aure_F42580_V1	-	F42580
Staphylococcus aureus F42582	1418287	PRJNA227576	227576	Terrabacteria group	Firmicutes	2.83368	32.8	-	JGJA01	44	2936	2781	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402500	GCA_000604845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/845/GCA_000604845.1_Stap_aure_F42582_V1	-	F42582
"Salmonella enterica subsp. arizonae serovar 18:z4,z23:-"	1192839	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.48706	51.5	-	JYVQ01	100	4495	4023	12/22/15	3/1/17	Contig	FDA	SAMN02699243	GCA_001479245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/245/GCA_001479245.1_Salmonella_enterica_CVM_N31597-SQ_v1.0	-	CVM N31597
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38325	65.6	-	MMYD01	15	4274	4096	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916266	GCA_001851395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/395/GCA_001851395.1_ASM185139v1	-	01-R1404
Escherichia coli 87A	1412831	PRJNA224235	224235	Proteobacteria	Gammaproteobacteria	5.26846	50.4	-	AYRB01	1232	5572	5024	12/3/13	2/22/17	Contig	University Medical Center Utrecht	SAMN02471483	GCA_000503615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/615/GCA_000503615.1_Ecoli87A	-	87A
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07685	39.6	-	FIEK01	33	2276	2035	2/10/16	3/13/17	Contig	SC	SAMEA2149917	GCA_900059745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/745/GCA_900059745.1_10702_5_74	-	2690STDY5561728
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	7.09972	65.9	-	NFFH01	168	6950	6716	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761161	GCA_002135685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/685/GCA_002135685.1_ASM213568v1	-	S819_C17_BS
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.59311	56.9	-	FWIZ01	67	5596	5265	3/29/17	4/3/17	Scaffold	SC	SAMEA4370527	GCA_900172705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/705/GCA_900172705.1_20794_7_110	-	VRES1079
Klebsiella pneumoniae	573	PRJEB8766	291369	Proteobacteria	Gammaproteobacteria	5.55502	56.9	-	FWIU01	95	5642	5278	3/29/17	4/3/17	Scaffold	SC	SAMEA3531576	GCA_900172715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/715/GCA_900172715.1_18090_4_65	-	VRCO0117
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	6.99275	65.8	-	NFFM01	104	6713	6502	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761156	GCA_002135705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/705/GCA_002135705.1_ASM213570v1	-	S769_C16_RS
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07456	39.6	-	FIAU01	37	2279	2029	2/10/16	3/13/17	Contig	SC	SAMEA2157648	GCA_900059875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/875/GCA_900059875.1_10678_7_57	-	2690STDY5561709
Escherichia coli FBH1	1412836	PRJNA224243	224243	Proteobacteria	Gammaproteobacteria	5.01821	50.8	-	AYRC01	141	5235	4873	12/3/13	2/23/17	Contig	University Medical Center Utrecht	SAMN02471517	GCA_000503635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/635/GCA_000503635.1_EcoliFBH1	-	FBH1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39831	65.6	-	MMYA01	9	4273	4106	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916269	GCA_001851425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/425/GCA_001851425.1_ASM185142v1	-	02-R1683
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.06134	52	-	JYVR01	82	5195	4937	12/22/15	3/1/17	Contig	FDA	SAMN02699244	GCA_001479265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/265/GCA_001479265.1_Salmonella_enterica_CVM_N31844-SQ_v1.0	-	CVM N31844
Staphylococcus aureus F45759	1418288	PRJNA227577	227577	Terrabacteria group	Firmicutes	2.8135	32.8	-	JGJB01	35	2918	2786	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402501	GCA_000604865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/865/GCA_000604865.1_Stap_aure_F45759_V1	-	F45759
Staphylococcus aureus F48950	1418289	PRJNA227578	227578	Terrabacteria group	Firmicutes	2.86091	32.8	-	JGJC01	17	3013	2849	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402502	GCA_000604885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/885/GCA_000604885.1_Stap_aure_F48950_V1	-	F48950
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.07919	51.9	-	JYVS01	101	5229	4959	12/22/15	3/1/17	Contig	FDA	SAMN02699245	GCA_001479275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/275/GCA_001479275.1_Salmonella_enterica_CVM_N31846-SQ_v1.0	-	CVM N31846
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3986	65.6	-	MMYB01	7	4276	4112	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916268	GCA_001851435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/435/GCA_001851435.1_ASM185143v1	-	01-R1386
Escherichia coli 1047	1411693	PRJNA224146	224146	Proteobacteria	Gammaproteobacteria	5.09281	50.7	-	AYQG01	400	5323	4966	12/3/13	2/22/17	Contig	University Medical Center Utrecht	SAMN02471516	GCA_000503655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/655/GCA_000503655.1_Ecoli1047	-	1047
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.0747	39.6	-	FIDP01	27	2275	2033	2/10/16	3/8/17	Contig	SC	SAMEA2144032	GCA_900059885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/885/GCA_900059885.1_10702_5_51	-	2690STDY5561833
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	6.91877	65.8	-	NFFL01	99	6613	6408	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761157	GCA_002135715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/715/GCA_002135715.1_ASM213571v1	-	S782_C16_RS
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.43002	57.4	-	FWIY01	60	5474	5173	3/29/17	4/3/17	Scaffold	SC	SAMEA4370528	GCA_900172725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/725/GCA_900172725.1_20794_7_111	-	VRES1170
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.5995	56.9	-	FWIN01	54	5591	5282	3/29/17	4/3/17	Scaffold	SC	SAMEA4370519	GCA_900172735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/735/GCA_900172735.1_20794_7_102	-	VRES1071
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	7.11564	65.8	-	NFFN01	169	6901	6616	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761155	GCA_002135755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/755/GCA_002135755.1_ASM213575v1	-	S749_C15_RS
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07484	39.6	-	FHWI01	33	2274	2032	2/10/16	3/13/17	Contig	SC	SAMEA2146859	GCA_900060085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/085/GCA_900060085.1_10678_6_14	-	2690STDY5561866
Escherichia coli 38.52	1411694	PRJNA224147	224147	Proteobacteria	Gammaproteobacteria	5.14114	50.6	-	AYQH01	499	5366	5004	12/3/13	2/22/17	Contig	University Medical Center Utrecht	SAMN02471506	GCA_000503675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/675/GCA_000503675.1_Ecoli38.52	-	38.52
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37583	65.6	-	MMXY01	10	4261	4096	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916271	GCA_001851465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/465/GCA_001851465.1_ASM185146v1	-	01-R1649
Salmonella enterica subsp. enterica serovar Litchfield	486998	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.68611	52.2	-	JYVT01	107	4758	4527	12/22/15	3/1/17	Contig	FDA	SAMN02699246	GCA_001479305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/305/GCA_001479305.1_Salmonella_enterica_CVM_N32042-SQ_v1.0	-	CVM N32042
Staphylococcus aureus F59332	1418292	PRJNA227581	227581	Terrabacteria group	Firmicutes	2.8863	32.8	-	JGJD01	48	3028	2876	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402505	GCA_000604905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/905/GCA_000604905.1_Stap_aure_F59332_V1	-	F59332
Staphylococcus aureus F59335	1418293	PRJNA227582	227582	Terrabacteria group	Firmicutes	2.85022	32.8	-	JGJE01	44	2975	2830	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402506	GCA_000604925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/925/GCA_000604925.1_Stap_aure_F59335_V1	-	F59335
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.98212	52.1	-	JYVU01	141	5142	4875	12/22/15	3/1/17	Contig	FDA	SAMN02699247	GCA_001479325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/325/GCA_001479325.1_Salmonella_enterica_CVM_N32045-SQ_v1.0	-	CVM N32045
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39047	65.6	-	MMXZ01	7	4262	4099	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916270	GCA_001851475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/475/GCA_001851475.1_ASM185147v1	-	01-R1533
Escherichia coli 1240	1411695	PRJNA224151	224151	Proteobacteria	Gammaproteobacteria	5.19651	50.6	-	AYQI01	491	5451	5122	12/3/13	2/23/17	Contig	University Medical Center Utrecht	SAMN02471479	GCA_000503695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/695/GCA_000503695.1_Ecoli1240	-	1240
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07475	39.6	-	FIAW01	30	2283	2032	2/10/16	3/15/17	Contig	SC	SAMEA2162758	GCA_900060095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/095/GCA_900060095.1_10678_7_6	-	2690STDY5561733
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	7.55476	65.3	-	NFFQ01	471	7206	6916	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761152	GCA_002135765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/765/GCA_002135765.1_ASM213576v1	-	S700_C14_RS
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.57657	56.9	-	FWIR01	98	5556	5229	3/29/17	4/3/17	Scaffold	SC	SAMEA4370520	GCA_900172745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/745/GCA_900172745.1_20794_7_103	-	VRES1072
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.43808	57.4	-	FWIO01	48	5493	5222	3/29/17	4/3/17	Scaffold	SC	SAMEA4370531	GCA_900172755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/755/GCA_900172755.1_20794_7_114	-	VRES1176
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	6.81414	66.1	-	NFFR01	91	6480	6297	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761151	GCA_002135795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/795/GCA_002135795.1_ASM213579v1	-	S669_C14_BS
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07492	39.6	-	FIBB01	38	2284	2028	2/10/16	3/15/17	Contig	SC	SAMEA2155176	GCA_900060105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/105/GCA_900060105.1_10678_7_62	-	2690STDY5561745
Escherichia coli 1350	1411696	PRJNA224152	224152	Proteobacteria	Gammaproteobacteria	5.18386	50.6	-	AYQJ01	380	5488	5150	12/3/13	2/22/17	Contig	University Medical Center Utrecht	SAMN02471497	GCA_000503715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/503/715/GCA_000503715.1_Ecoli1350	-	1350
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40053	65.6	-	MMXX01	4	4273	4112	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916272	GCA_001851505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/505/GCA_001851505.1_ASM185150v1	-	01-R1614
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.96778	52.1	-	JYVV01	125	5111	4847	12/22/15	3/1/17	Contig	FDA	SAMN02699248	GCA_001479335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/335/GCA_001479335.1_Salmonella_enterica_CVM_N32048-SQ_v1.0	-	CVM N32048
Staphylococcus aureus F80972	1418296	PRJNA227585	227585	Terrabacteria group	Firmicutes	2.92877	32.7	-	JGJF01	22	3097	2955	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402509	GCA_000604945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/945/GCA_000604945.1_Stap_aure_F80972_V1	-	F80972
Staphylococcus aureus H12662	1418297	PRJNA227586	227586	Terrabacteria group	Firmicutes	2.8858	32.7	-	JGJG01	20	3055	2891	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402510	GCA_000604965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/965/GCA_000604965.1_Stap_aure_H12662_V1	-	H12662
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.98091	52.1	-	JYVW01	123	5130	4862	12/22/15	3/1/17	Contig	FDA	SAMN02699249	GCA_001479365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/365/GCA_001479365.1_Salmonella_enterica_CVM_N32051-SQ_v1.0	-	CVM N32051
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39847	65.6	-	MMXW01	8	4264	4112	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916273	GCA_001851515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/515/GCA_001851515.1_ASM185151v1	-	01-R1544
Escherichia coli LAU-EC6	1389417	PRJNA215780	215780	Proteobacteria	Gammaproteobacteria	5.35719	50.3	-	AYNF01	105	5646	5270	12/11/13	2/25/17	Contig	Lebanese American University	SAMN02470237	GCA_000506445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/445/GCA_000506445.2_WGS_Escherichia_coli_EC6	24558252	LAU-EC6
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07569	39.6	-	FICZ01	35	2267	2026	2/10/16	3/15/17	Contig	SC	SAMEA2156679	GCA_900060115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/115/GCA_900060115.1_10702_5_37	-	2690STDY5561723
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	7.18146	65.6	-	NFFO01	125	6961	6686	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761154	GCA_002135805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/805/GCA_002135805.1_ASM213580v1	-	S742_C15_BS
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.43379	57.4	-	FWJE01	53	5487	5206	3/29/17	4/3/17	Scaffold	SC	SAMEA4370532	GCA_900172765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/765/GCA_900172765.1_20794_7_115	-	VRES1179
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.60556	56.9	-	FWKE01	39	5599	5316	3/29/17	4/3/17	Scaffold	SC	SAMEA4370533	GCA_900172775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/775/GCA_900172775.1_20794_7_116	-	VRES1611
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	7.10313	65.7	-	NFFS01	127	6803	6569	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761150	GCA_002135835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/835/GCA_002135835.1_ASM213583v1	-	S668_C14_BS
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07517	39.6	-	FHYL01	30	2261	2031	2/10/16	3/12/17	Contig	SC	SAMEA2144832	GCA_900060305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/305/GCA_900060305.1_10678_6_72	-	2690STDY5561879
Escherichia coli LAU-EC7	1389418	PRJNA215783	215783	Proteobacteria	Gammaproteobacteria	5.28113	50.7	-	AYNG01	76	5604	5217	12/11/13	2/25/17	Contig	Lebanese American University	SAMN02470241	GCA_000506465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/465/GCA_000506465.2_WGS_Escherichia_coli_EC7	24558252	LAU-EC7
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34292	65.6	-	MMXV01	1	4229	4087	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916274	GCA_001851545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/545/GCA_001851545.1_ASM185154v1	-	01-R1599
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.93369	52.1	-	JYVY01	96	5075	4817	12/22/15	3/1/17	Contig	FDA	SAMN02699251	GCA_001479385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/385/GCA_001479385.1_Salmonella_enterica_CVM_N32053-SQ_v1.0	-	CVM N32053
Staphylococcus aureus H15911	1418299	PRJNA227588	227588	Terrabacteria group	Firmicutes	2.8648	32.8	-	JGJH01	48	2993	2845	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402512	GCA_000604985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/985/GCA_000604985.1_Stap_aure_H15911_V1	-	H15911
Staphylococcus aureus H19392	1418300	PRJNA227589	227589	Terrabacteria group	Firmicutes	2.86161	32.7	-	JGJI01	36	2980	2834	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402513	GCA_000605005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/005/GCA_000605005.1_Stap_aure_H19392_V1	-	H19392
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.09331	52	-	JYWA01	100	5269	4996	12/22/15	3/1/17	Contig	FDA	SAMN02699253	GCA_001479395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/395/GCA_001479395.1_Salmonella_enterica_CVM_N32056-R_v1.0	-	CVM N32056
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38722	65.6	-	MMXT01	12	4261	4097	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916276	GCA_001851555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/555/GCA_001851555.1_ASM185155v1	-	03-R0947
Escherichia coli LAU-EC9	1389420	PRJNA215785	215785	Proteobacteria	Gammaproteobacteria	5.24378	50.5	-	AYNI01	113	5483	5077	12/11/13	2/25/17	Contig	Lebanese American University	SAMN02470239	GCA_000506485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/485/GCA_000506485.2_WGS_Escherichia_coli_EC9	24558252	LAU-EC9
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07459	39.6	-	FIAZ01	39	2268	2025	2/10/16	3/13/17	Contig	SC	SAMEA2147658	GCA_900060315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/315/GCA_900060315.1_10678_7_63	-	2690STDY5561774
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	6.97734	66	-	NFFT01	97	6765	6574	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761149	GCA_002135845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/845/GCA_002135845.1_ASM213584v1	-	S658_C13_RS
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.59809	56.9	-	FWJG01	62	5596	5286	3/29/17	4/3/17	Scaffold	SC	SAMEA4370534	GCA_900172785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/785/GCA_900172785.1_20794_7_117	-	VRES1615
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.72814	57.1	-	FWJF01	83	5859	5594	3/29/17	4/3/17	Scaffold	SC	SAMEA4370535	GCA_900172795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/795/GCA_900172795.1_20794_7_118	-	VRES0689
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	6.84648	66	-	NFFU01	100	6525	6338	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761148	GCA_002135875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/875/GCA_002135875.1_ASM213587v1	-	S650_C13_BS
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07751	39.6	-	FHXM01	36	2273	2031	2/10/16	3/13/17	Contig	SC	SAMEA2147676	GCA_900060605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/605/GCA_900060605.1_10678_6_43	-	2690STDY5561855
Escherichia coli LAU-EC10	1417796	PRJNA215786	215786	Proteobacteria	Gammaproteobacteria	5.30058	50.6	-	AYNJ01	147	5592	5125	12/11/13	2/23/17	Contig	Lebanese American University	SAMN02470236	GCA_000506505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/505/GCA_000506505.1_WGS_Escherichia_coli_EC10	24558252	LAU-EC10
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37667	65.6	-	MMXU01	4	4266	4105	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916275	GCA_001851575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/575/GCA_001851575.1_ASM185157v1	-	02-R0991
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.01907	51.7	-	JYWB01	137	5082	4751	12/22/15	3/1/17	Contig	FDA	SAMN02699254	GCA_001479425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/425/GCA_001479425.1_Salmonella_enterica_CVM_N32064-SQ_v1.0	-	CVM N32064
Staphylococcus aureus H22632	1418304	PRJNA227593	227593	Terrabacteria group	Firmicutes	2.83761	32.7	-	JGJJ01	34	2950	2822	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402517	GCA_000605025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/025/GCA_000605025.1_Stap_aure_H22632_V1	-	H22632
Staphylococcus aureus H22637	1418305	PRJNA227594	227594	Terrabacteria group	Firmicutes	2.89549	32.7	-	JGJK01	17	3061	2901	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402518	GCA_000605045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/045/GCA_000605045.1_Stap_aure_H22637_V1	-	H22637
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91227	52.1	-	JYWD01	68	5060	4813	12/22/15	3/1/17	Contig	FDA	SAMN02699256	GCA_001479435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/435/GCA_001479435.1_Salmonella_enterica_CVM_N32754-SQ_v1.0	-	CVM N32754
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39276	65.6	-	MMXR01	10	4267	4094	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916278	GCA_001851625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/625/GCA_001851625.1_ASM185162v1	-	02-R0119
Escherichia coli LAU-EC8	1389419	PRJNA215784	215784	Proteobacteria	Gammaproteobacteria	5.2377	50.5	-	AYNH01	108	5479	5070	12/11/13	2/25/17	Contig	Lebanese American University	SAMN02470235	GCA_000506585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/585/GCA_000506585.2_WGS_Escherichia_coli_EC8	24558252	LAU-EC8
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07526	39.6	-	FHZF01	33	2286	2034	2/10/16	3/13/17	Contig	SC	SAMEA2153357	GCA_900060615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/615/GCA_900060615.1_10678_7_19	-	2690STDY5561769
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	6.99351	65.9	-	NFFV01	135	6646	6421	5/15/17	6/15/17	Scaffold	Pseudomonas Italian work group	SAMN06761147	GCA_002135885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/885/GCA_002135885.1_ASM213588v1	-	S626_C13_RS
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.82706	56.7	-	FWJH01	71	5930	5587	3/29/17	5/22/17	Scaffold	SC	SAMEA4370537	GCA_900172805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/805/GCA_900172805.1_20794_7_120	-	VRES1232
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.59017	56.9	-	FWJI01	71	5568	5259	3/29/17	4/3/17	Scaffold	SC	SAMEA4370518	GCA_900172815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/815/GCA_900172815.1_20794_7_101	-	VRES1070
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	6.92574	65.9	-	NFFW01	117	6634	6428	5/15/17	5/24/17	Scaffold	Pseudomonas Italian work group	SAMN06761146	GCA_002135915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/915/GCA_002135915.1_ASM213591v1	-	S625_C13_RS
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07539	39.6	-	FHZM01	35	2283	2031	2/10/16	3/13/17	Contig	SC	SAMEA2161954	GCA_900060625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/625/GCA_900060625.1_10678_7_27	-	2690STDY5561755
Escherichia coli ATCC BAA-2209	1405293	PRJNA221246	221246	Proteobacteria	Gammaproteobacteria	5.73356	50.3	-	AZBZ01	1763	5978	5461	12/11/13	2/22/17	Contig	American Type Culture Collection	SAMN02469307	GCA_000506825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/825/GCA_000506825.1_Q458v4	-	ATCC BAA-2209
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40475	65.6	-	MMXO01	14	4279	4099	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916281	GCA_001851635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/635/GCA_001851635.1_ASM185163v1	-	02-R0829
Salmonella enterica subsp. enterica serovar Senftenberg	28150	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.96492	52	-	JYWE01	80	5059	4785	12/22/15	3/1/17	Contig	FDA	SAMN02699257	GCA_001479465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/465/GCA_001479465.1_Salmonella_enterica_CVM_N32755-R_v1.0	-	CVM N32755
Staphylococcus aureus H43687	1418306	PRJNA227595	227595	Terrabacteria group	Firmicutes	2.83425	32.7	-	JGJL01	21	2985	2836	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402519	GCA_000605065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/065/GCA_000605065.1_Stap_aure_H43687_V1	-	H43687
Staphylococcus aureus H43690	1418307	PRJNA227596	227596	Terrabacteria group	Firmicutes	2.81019	32.8	-	JGJM01	25	2925	2771	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402520	GCA_000605085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/085/GCA_000605085.1_Stap_aure_H43690_V1	-	H43690
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.8868	52.1	-	JYWG01	73	5030	4787	12/22/15	3/1/17	Contig	FDA	SAMN02699259	GCA_001479485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/485/GCA_001479485.1_Salmonella_enterica_CVM_N32772-SQ_v1.0	-	CVM N32772
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38185	65.6	-	MMXP01	9	4254	4091	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916280	GCA_001851665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/665/GCA_001851665.1_ASM185166v1	-	02-R0856
Escherichia coli ATCC BAA-2215	1405294	PRJNA221247	221247	Proteobacteria	Gammaproteobacteria	5.28481	50.6	-	AZCA01	373	5764	5314	12/11/13	2/23/17	Contig	American Type Culture Collection	SAMN02469308	GCA_000506845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/845/GCA_000506845.1_Q459v3	-	ATCC BAA-2215
Streptococcus pneumoniae	1313	PRJEB2102	203746	Terrabacteria group	Firmicutes	2.0973	39.6	-	FIVA01	51	2327	2081	2/10/16	3/13/17	Contig	SC	SAMEA685562	GCA_900060685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/685/GCA_900060685.1_4525_8_2	-	D33216
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	6.92066	65.9	-	NFFX01	125	6609	6415	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761145	GCA_002135925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/925/GCA_002135925.1_ASM213592v1	-	S619_C13_RS
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.67521	57	-	FWJK01	67	5747	5446	3/29/17	4/3/17	Scaffold	SC	SAMEA4370536	GCA_900172825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/825/GCA_900172825.1_20794_7_119	-	VRES1229
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.82769	56.7	-	FWJJ01	68	5908	5590	3/29/17	4/10/17	Scaffold	SC	SAMEA4370538	GCA_900172835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/835/GCA_900172835.1_20794_7_121	-	VRES1236
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	7.14667	65.7	-	NFFY01	110	6945	6668	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761144	GCA_002135955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/955/GCA_002135955.1_ASM213595v1	-	S611_C13_RS
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07525	39.6	-	FHXO01	35	2277	2030	2/10/16	3/8/17	Contig	SC	SAMEA2142484	GCA_900060905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/905/GCA_900060905.1_10678_6_46	-	2690STDY5561889
Escherichia coli ATCC BAA-2196	1405292	PRJNA221245	221245	Proteobacteria	Gammaproteobacteria	5.52277	50.4	-	AYOF01	503	6093	5594	12/16/13	2/22/17	Contig	American Type Culture Collection	SAMN02469306	GCA_000508365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/365/GCA_000508365.1_Q457	-	ATCC BAA-2196
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40776	65.6	-	MMXM01	16	4286	4117	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916283	GCA_001851705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/705/GCA_001851705.1_ASM185170v1	-	02-R0188
Salmonella enterica subsp. enterica serovar Worthington	1160769	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.86725	52.2	-	JYWH01	185	4953	4671	12/22/15	3/1/17	Contig	FDA	SAMN02699260	GCA_001479505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/505/GCA_001479505.1_Salmonella_enterica_CVM_N32773-SQ_v1.0	-	CVM N32773
Staphylococcus aureus H43700	1418309	PRJNA227598	227598	Terrabacteria group	Firmicutes	2.85258	32.8	-	JGJN01	46	2987	2821	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402522	GCA_000605105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/105/GCA_000605105.1_Stap_aure_H43700_V1	-	H43700
Staphylococcus aureus H81901	1418312	PRJNA227601	227601	Terrabacteria group	Firmicutes	2.81118	32.8	-	JGJO01	36	2910	2771	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402525	GCA_000605125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/125/GCA_000605125.1_Stap_aure_H81901_V1	-	H81901
Salmonella enterica subsp. enterica serovar Senftenberg	28150	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.89865	52	-	JYWI01	83	5007	4745	12/22/15	3/1/17	Contig	FDA	SAMN02699261	GCA_001479525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/525/GCA_001479525.1_Salmonella_enterica_CVM_N32779-R_v1.0	-	CVM N32779
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3938	65.6	-	MMXN01	2	4260	4102	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916282	GCA_001851715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/715/GCA_001851715.1_ASM185171v1	-	02-R0819
Escherichia coli ATCC BAA-2219	1405295	PRJNA221248	221248	Proteobacteria	Gammaproteobacteria	5.16102	50.4	-	AYRW01	495	5523	5086	12/16/13	2/22/17	Contig	American Type Culture Collection	SAMN02469309	GCA_000508385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/385/GCA_000508385.1_Q460	-	ATCC BAA-2219
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.0763	39.6	-	FHXS01	29	2279	2029	2/10/16	3/13/17	Contig	SC	SAMEA2153452	GCA_900060915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/915/GCA_900060915.1_10678_6_5	-	2690STDY5561780
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	7.83733	65.1	-	NFFZ01	179	7787	7507	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761143	GCA_002135965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/965/GCA_002135965.1_ASM213596v1	-	S567_C10_BS
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.72379	57.1	-	FWJR01	82	5855	5601	3/29/17	4/3/17	Scaffold	SC	SAMEA4370539	GCA_900172845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/845/GCA_900172845.1_20794_7_122	-	VRES1237
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.82663	56.7	-	FWJN01	76	5906	5595	3/29/17	4/3/17	Scaffold	SC	SAMEA4370540	GCA_900172855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/855/GCA_900172855.1_20794_7_123	-	VRES1271
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	6.8949	66.1	-	NFGB01	100	6648	6463	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761141	GCA_002135995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/995/GCA_002135995.1_ASM213599v1	-	S518_C10_BS
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07667	39.6	-	FICO01	36	2287	2036	2/10/16	3/8/17	Contig	SC	SAMEA2160708	GCA_900060935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/935/GCA_900060935.1_10702_5_26	-	2690STDY5561668
Escherichia coli 148	1412815	PRJNA224190	224190	Proteobacteria	Gammaproteobacteria	4.88417	50.6	-	AYJX01	269	5057	4812	12/3/13	2/22/17	Contig	University Medical Center Utrecht	SAMN02471499	GCA_000511425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/425/GCA_000511425.1_Ecoli148	-	148
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39146	65.6	-	MMXL01	10	4281	4091	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916284	GCA_001851725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/725/GCA_001851725.1_ASM185172v1	-	02-R1825
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.7411	52.2	-	JYWJ01	162	4844	4589	12/22/15	3/1/17	Contig	FDA	SAMN02699262	GCA_001479545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/545/GCA_001479545.1_Salmonella_enterica_CVM_N32781-SQ_v1.0	-	CVM N32781
Staphylococcus aureus H88149	1418313	PRJNA227602	227602	Terrabacteria group	Firmicutes	2.92893	32.8	-	JGJP01	62	3109	2909	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402526	GCA_000605145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/145/GCA_000605145.1_Stap_aure_H88149_V1	-	H88149
Staphylococcus aureus H88163	1418314	PRJNA227603	227603	Terrabacteria group	Firmicutes	2.85817	32.8	-	JGJQ01	43	2980	2837	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402527	GCA_000605165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/165/GCA_000605165.1_Stap_aure_H88163_V1	-	H88163
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.75264	52.2	-	JYWK01	96	4838	4592	12/22/15	3/1/17	Contig	FDA	SAMN02699263	GCA_001479565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/565/GCA_001479565.1_Salmonella_enterica_CVM_N32788-R_v1.0	-	CVM N32788
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40383	65.6	-	MMXK01	5	4267	4109	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916285	GCA_001851765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/765/GCA_001851765.1_ASM185176v1	-	02-R0986
Escherichia coli FAH2	1412832	PRJNA224238	224238	Proteobacteria	Gammaproteobacteria	5.06931	50.7	-	AYJY01	139	5289	4949	12/3/13	2/22/17	Contig	University Medical Center Utrecht	SAMN02471512	GCA_000511445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/445/GCA_000511445.1_EcoliFAH2	-	FAH2
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07749	39.6	-	FICQ01	29	2272	2037	2/10/16	3/6/17	Contig	SC	SAMEA2161694	GCA_900060945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/945/GCA_900060945.1_10702_5_28	-	2690STDY5561809
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	7.1661	65.7	-	NFGA01	235	6994	6682	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761142	GCA_002136005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/005/GCA_002136005.1_ASM213600v1	-	S558_C10_BS
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.82795	56.7	-	FWJV01	65	5910	5595	3/29/17	4/3/17	Scaffold	SC	SAMEA4370541	GCA_900172865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/865/GCA_900172865.1_20794_7_124	-	VRES1274
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.38445	57.3	-	FWJO01	68	5350	5064	3/29/17	4/3/17	Scaffold	SC	SAMEA4370545	GCA_900172875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/875/GCA_900172875.1_20794_7_128	-	VRES1247
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	6.99332	66	-	NFGD01	114	6805	6605	5/15/17	6/15/17	Scaffold	Pseudomonas Italian work group	SAMN06761139	GCA_002136015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/015/GCA_002136015.1_ASM213601v1	-	S443_C09_RS
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07483	39.6	-	FHWK01	33	2268	2027	2/10/16	3/13/17	Contig	SC	SAMEA2162874	GCA_900061265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/265/GCA_900061265.1_10678_6_17	-	2690STDY5561747
Escherichia coli FAH1	1412833	PRJNA224240	224240	Proteobacteria	Gammaproteobacteria	5.18277	50.7	-	AYJZ01	237	5475	5094	12/3/13	2/22/17	Contig	University Medical Center Utrecht	SAMN02471475	GCA_000511465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/465/GCA_000511465.1_EcoliFAH1	-	FAH1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38518	65.6	-	MMXI01	5	4254	4092	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916287	GCA_001851785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/785/GCA_001851785.1_ASM185178v1	-	02-R0931
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91513	52.1	-	JYWL01	90	5065	4807	12/22/15	3/1/17	Contig	FDA	SAMN02699264	GCA_001479585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/585/GCA_001479585.1_Salmonella_enterica_CVM_N37907-SQ_v1.0	-	CVM N37907
Staphylococcus aureus H88170	1418315	PRJNA227604	227604	Terrabacteria group	Firmicutes	2.85718	32.7	-	JGJR01	18	2990	2825	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402528	GCA_000605185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/185/GCA_000605185.1_Stap_aure_H88170_V1	-	H88170
Staphylococcus aureus M13074	1418316	PRJNA227605	227605	Terrabacteria group	Firmicutes	2.84932	32.7	-	JGJS01	63	2978	2819	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402529	GCA_000605205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/205/GCA_000605205.1_Stap_aure_M13074_V1	-	M13074
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.83248	52.2	-	JYWM01	127	4941	4694	12/22/15	3/1/17	Contig	FDA	SAMN02699265	GCA_001479605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/605/GCA_001479605.1_Salmonella_enterica_CVM_N37910-SQ_v1.0	-	CVM N37910
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40215	65.6	-	MMXJ01	11	4288	4111	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916286	GCA_001851795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/795/GCA_001851795.1_ASM185179v1	-	02-R0356
Escherichia coli FAP1	1412834	PRJNA224241	224241	Proteobacteria	Gammaproteobacteria	5.14163	50.5	-	AYKA01	162	5400	5049	12/3/13	2/22/17	Contig	University Medical Center Utrecht	SAMN02471476	GCA_000511485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/485/GCA_000511485.1_EcoliFAP1	-	FAP1
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.0767	39.6	-	FHXN01	31	2271	2031	2/10/16	3/15/17	Contig	SC	SAMEA2157572	GCA_900061275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/275/GCA_900061275.1_10678_6_44	-	2690STDY5561908
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	6.99262	66	-	NFGE01	104	6798	6606	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761138	GCA_002136055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/055/GCA_002136055.1_ASM213605v1	-	S442_C09_BS
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.4025	57.3	-	FWJL01	56	5377	5099	3/29/17	4/3/17	Scaffold	SC	SAMEA4370544	GCA_900172885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/885/GCA_900172885.1_20794_7_127	-	VRES1249
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.4361	57.4	-	FWJQ01	54	5495	5212	3/29/17	4/3/17	Scaffold	SC	SAMEA4370549	GCA_900172895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/895/GCA_900172895.1_20794_7_132	-	VRES1446
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	7.01492	66	-	NFGH01	140	6825	6629	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761135	GCA_002136065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/065/GCA_002136065.1_ASM213606v1	-	S434_C09_BS
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07458	39.6	-	FHXY01	36	2282	2036	2/10/16	3/13/17	Contig	SC	SAMEA2145426	GCA_900061295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/295/GCA_900061295.1_10678_6_58	-	2690STDY5561868
Escherichia coli FAP2	1412835	PRJNA224242	224242	Proteobacteria	Gammaproteobacteria	5.09855	50.5	-	AYKB01	158	5345	4997	12/3/13	2/23/17	Contig	University Medical Center Utrecht	SAMN02471486	GCA_000511505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/505/GCA_000511505.1_EcoliFAP2	-	FAP2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3977	65.6	-	MMXH01	8	4281	4103	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916288	GCA_001851825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/825/GCA_001851825.1_ASM185182v1	-	02-R0328
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.11373	51.7	-	JYWN01	156	5250	4922	12/22/15	3/1/17	Contig	FDA	SAMN02699266	GCA_001479615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/615/GCA_001479615.1_Salmonella_enterica_CVM_N37917-SQ_v1.0	-	CVM N37917
Staphylococcus aureus M13099	1418317	PRJNA227606	227606	Terrabacteria group	Firmicutes	2.87451	32.7	-	JGJT01	11	3032	2877	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402530	GCA_000605225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/225/GCA_000605225.1_Stap_aure_M13099_V1	-	M13099
Staphylococcus aureus M17027	1418318	PRJNA227607	227607	Terrabacteria group	Firmicutes	2.91902	32.7	-	JGJU01	49	3063	2883	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402531	GCA_000605245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/245/GCA_000605245.1_Stap_aure_M17027_V1	-	M17027
Salmonella enterica subsp. enterica serovar Berta	28142	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.80689	52.2	-	JYWO01	59	4919	4667	12/22/15	3/1/17	Contig	FDA	SAMN02699267	GCA_001479635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/635/GCA_001479635.1_Salmonella_enterica_CVM_N37918-SQ_v1.0	-	CVM N37918
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41133	65.6	-	MMXF01	49	4310	4119	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916290	GCA_001851845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/845/GCA_001851845.1_ASM185184v1	-	02-R0385
Escherichia coli FBP1	1412837	PRJNA224244	224244	Proteobacteria	Gammaproteobacteria	5.13475	50.6	-	AYKC01	182	5398	5008	12/3/13	2/22/17	Contig	University Medical Center Utrecht	SAMN02471477	GCA_000511525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/525/GCA_000511525.1_EcoliFBP1	-	FBP1
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07604	39.6	-	FIEG01	29	2277	2030	2/10/16	3/13/17	Contig	SC	SAMEA2148019	GCA_900061315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/315/GCA_900061315.1_10702_5_72	-	2690STDY5561823
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	6.99271	66	-	NFGG01	106	6802	6606	5/15/17	6/15/17	Scaffold	Pseudomonas Italian work group	SAMN06761136	GCA_002136075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/075/GCA_002136075.1_ASM213607v1	-	S435_C09_BS
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.40839	57.3	-	FWJP01	53	5391	5104	3/29/17	4/3/17	Scaffold	SC	SAMEA4370546	GCA_900172905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/905/GCA_900172905.1_20794_7_129	-	VRES1242
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.83131	56.7	-	FWJM01	70	5910	5599	3/29/17	4/3/17	Scaffold	SC	SAMEA4370542	GCA_900172915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/915/GCA_900172915.1_20794_7_125	-	VRES1272
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	7.03049	66	-	NFGI01	147	6827	6633	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761134	GCA_002136115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/115/GCA_002136115.1_ASM213611v1	-	S432_C09_RS
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07691	39.6	-	FIEM01	28	2279	2031	2/10/16	3/6/17	Contig	SC	SAMEA2146468	GCA_900061325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/325/GCA_900061325.1_10702_5_75	-	2690STDY5561665
Escherichia coli FCH1	1412838	PRJNA224245	224245	Proteobacteria	Gammaproteobacteria	5.09645	50.7	-	AYKD01	235	5372	5007	12/3/13	2/22/17	Contig	University Medical Center Utrecht	SAMN02471511	GCA_000511545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/545/GCA_000511545.1_EcoliFCH1	-	FCH1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37909	65.6	-	MMXE01	67	4293	4103	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916291	GCA_001851855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/855/GCA_001851855.1_ASM185185v1	-	02-R0095
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.98233	51.8	-	JYWR01	73	5093	4847	12/22/15	3/1/17	Contig	FDA	SAMN02699270	GCA_001479665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/665/GCA_001479665.1_Salmonella_enterica_CVM_N37938-SQ_v1.0	-	CVM N37938
Staphylococcus aureus M17033	1418319	PRJNA227608	227608	Terrabacteria group	Firmicutes	2.77941	32.8	-	JGJV01	47	2892	2700	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402532	GCA_000605265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/265/GCA_000605265.1_Stap_aure_M17033_V1	-	M17033
Staphylococcus aureus M24416	1418321	PRJNA227610	227610	Terrabacteria group	Firmicutes	2.93172	32.7	-	JGJW01	12	3111	2957	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402534	GCA_000605285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/285/GCA_000605285.1_Stap_aure_M24416_V1	-	M24416
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91134	52	-	JYWV01	79	4985	4685	12/22/15	3/1/17	Contig	FDA	SAMN02699274	GCA_001479685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/685/GCA_001479685.1_Salmonella_enterica_CVM_N38232-SQ_v1.0	-	CVM N38232
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39567	65.6	-	MMXG01	5	4274	4122	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916289	GCA_001851875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/875/GCA_001851875.1_ASM185187v1	-	02-R1063
Escherichia coli FCP1	1412839	PRJNA224246	224246	Proteobacteria	Gammaproteobacteria	4.74613	50.6	-	AYKE01	121	4888	4582	12/3/13	2/22/17	Contig	University Medical Center Utrecht	SAMN02471487	GCA_000511565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/511/565/GCA_000511565.1_EcoliFCP1	-	FCP1
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07567	39.6	-	FIEL01	31	2270	2026	2/10/16	3/13/17	Contig	SC	SAMEA1969334	GCA_900061335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/335/GCA_900061335.1_10702_5_76	-	2690STDY5561701
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	7.02931	66	-	NFGJ01	139	6861	6646	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761133	GCA_002136125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/125/GCA_002136125.1_ASM213612v1	-	S426_C09_BS
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.39967	57.3	-	FWJW01	74	5351	5084	3/29/17	4/3/17	Scaffold	SC	SAMEA4370548	GCA_900172925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/925/GCA_900172925.1_20794_7_131	-	VRES1257
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.43519	57.4	-	FWJY01	51	5485	5212	3/29/17	4/3/17	Scaffold	SC	SAMEA4370550	GCA_900172935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/935/GCA_900172935.1_20794_7_133	-	VRES1448
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	7.0028	66	-	NFGK01	124	6817	6612	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761132	GCA_002136135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/135/GCA_002136135.1_ASM213613v1	-	S422_C09_BS
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07776	39.6	-	FIAV01	27	2287	2032	2/10/16	3/15/17	Contig	SC	SAMEA2155718	GCA_900061865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/865/GCA_900061865.1_10678_7_59	-	2690STDY5561739
Escherichia coli O157:H7 str. F8092B	1343836	PRJNA63279	63279	Proteobacteria	Gammaproteobacteria	5.60441	50.4615	plasmid pO157:NZ_AVCD01000003.1/AVCD01000003.1	AVCD01	9	6018	5558	11/22/13	2/22/17	Contig	USDA	SAMN02304041	GCA_000513035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/035/GCA_000513035.1_E._coli_O157	-	F8092B
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40061	65.6	-	MMXB01	60	4312	4141	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916294	GCA_001851945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/945/GCA_001851945.1_ASM185194v1	-	02-R0846
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.93592	52.1	-	JYWW01	90	5055	4786	12/22/15	3/1/17	Contig	FDA	SAMN02699275	GCA_001479695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/695/GCA_001479695.1_Salmonella_enterica_CVM_N38234-SQ_v1.0	-	CVM N38234
Staphylococcus aureus M24418	1418322	PRJNA227611	227611	Terrabacteria group	Firmicutes	2.93502	32.7	-	JGJX01	20	3125	2962	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402535	GCA_000605305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/305/GCA_000605305.1_Stap_aure_M24418_V1	-	M24418
Staphylococcus aureus M24419	1418323	PRJNA227612	227612	Terrabacteria group	Firmicutes	2.83203	32.8	-	JGJY01	54	2950	2819	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402536	GCA_000605325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/325/GCA_000605325.1_Stap_aure_M24419_V1	-	M24419
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91304	52	-	JYWX01	99	4996	4681	12/22/15	3/1/17	Contig	FDA	SAMN02699276	GCA_001479725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/725/GCA_001479725.1_Salmonella_enterica_CVM_N38236-SQ_v1.0	-	CVM N38236
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40736	65.6	-	MMWV01	50	4319	4133	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916300	GCA_001852025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/025/GCA_001852025.1_ASM185202v1	-	02-R0857
Escherichia coli IS5	1433129	PRJEB5050	231782	Proteobacteria	Gammaproteobacteria	5.65538	50.4	-	CBWB01	408	6204	5424	12/16/13	3/5/17	Contig	AIT	SAMEA3138842	GCA_000513375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/375/GCA_000513375.1_IS5	-	IS5
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07498	39.6	-	FIBE01	34	2288	2037	2/10/16	3/13/17	Contig	SC	SAMEA2152036	GCA_900061875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/875/GCA_900061875.1_10678_7_67	-	2690STDY5561685
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	6.89569	66.1	-	NFGM01	89	6699	6516	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761130	GCA_002136165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/165/GCA_002136165.1_ASM213616v1	-	S292_C06_RS
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.64093	57.1	-	FWJX01	59	5708	5399	3/29/17	4/3/17	Scaffold	SC	SAMEA4370543	GCA_900172945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/945/GCA_900172945.1_20794_7_126	-	VRES1273
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.43567	57.4	-	FWJT01	49	5486	5215	3/29/17	4/3/17	Scaffold	SC	SAMEA4370551	GCA_900172955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/955/GCA_900172955.1_20794_7_134	-	VRES1462
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	6.98585	65.8	-	NFGR01	121	6711	6484	5/15/17	6/15/17	Scaffold	Pseudomonas Italian work group	SAMN06761125	GCA_002136195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/195/GCA_002136195.1_ASM213619v1	-	S137_C02_RS
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07582	39.6	-	FIBG01	34	2281	2029	2/10/16	3/13/17	Contig	SC	SAMEA1965930	GCA_900061885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/885/GCA_900061885.1_10678_7_69	-	2690STDY5561772
Escherichia coli IS1	1433131	PRJEB4760	231735	Proteobacteria	Gammaproteobacteria	5.37493	50.3	-	CBWA01	440	5852	5051	12/16/13	3/5/17	Contig	AIT	SAMEA3138846	GCA_000513455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/513/455/GCA_000513455.1_IS1v1	-	IS1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37732	65.5	-	MMWS01	77	4298	4096	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916303	GCA_001852095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/095/GCA_001852095.1_ASM185209v1	-	03-R1082
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.90942	52	-	JYWY01	158	4984	4677	12/22/15	3/1/17	Contig	FDA	SAMN02699277	GCA_001479745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/745/GCA_001479745.1_Salmonella_enterica_CVM_N38238-SQ_v1.0	-	CVM N38238
Staphylococcus aureus M35158	1418324	PRJNA227613	227613	Terrabacteria group	Firmicutes	2.85397	32.8	-	JGJZ01	29	2985	2833	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402537	GCA_000605345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/345/GCA_000605345.1_Stap_aure_M35158_V1	-	M35158
Staphylococcus aureus M45726	1418326	PRJNA227615	227615	Terrabacteria group	Firmicutes	2.84561	32.8	-	JGKA01	36	2961	2818	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402539	GCA_000605365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/365/GCA_000605365.1_Stap_aure_M45726_V1	-	M45726
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91279	52	-	JYWZ01	84	4990	4691	12/22/15	3/1/17	Contig	FDA	SAMN02699278	GCA_001479755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/755/GCA_001479755.1_Salmonella_enterica_CVM_N38240-SQ_v1.0	-	CVM N38240
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38542	65.6	-	MMWP01	29	4275	4071	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916306	GCA_001852175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/175/GCA_001852175.1_ASM185217v1	-	02-R1615
Escherichia coli IS25	1432548	PRJEB4807	232421	Proteobacteria	Gammaproteobacteria	5.34332	50.7	-	CBWG01	204	5822	5123	1/2/14	3/5/17	Contig	AIT	SAMEA3138853	GCA_000529355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/355/GCA_000529355.1_IS25v1	-	IS25
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07482	39.6	-	FIBI01	35	2276	2028	2/10/16	3/13/17	Contig	SC	SAMEA2151555	GCA_900062035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/035/GCA_900062035.1_10678_7_7	-	2690STDY5561735
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	7.28615	65.5	-	NFGO01	156	7068	6797	5/15/17	5/24/17	Scaffold	Pseudomonas Italian work group	SAMN06761128	GCA_002136205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/205/GCA_002136205.1_ASM213620v1	-	S247_C06_RS
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.56503	57.3	-	FWJS01	54	5568	5294	3/29/17	4/3/17	Scaffold	SC	SAMEA4370552	GCA_900172965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/965/GCA_900172965.1_20794_7_135	-	VRES0176
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.40001	57.3	-	FWJU01	61	5371	5081	3/29/17	4/3/17	Scaffold	SC	SAMEA4370547	GCA_900172975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/975/GCA_900172975.1_20794_7_130	-	VRES1253
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	6.91821	66	-	NFGN01	152	6733	6535	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761129	GCA_002136215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/215/GCA_002136215.1_ASM213621v1	-	S252_C06_RS
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07633	39.6	-	FICP01	35	2281	2029	2/10/16	3/6/17	Contig	SC	SAMEA2144407	GCA_900062045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/045/GCA_900062045.1_10702_5_27	-	2690STDY5561681
Escherichia coli IS35	1432551	PRJEB4810	232415	Proteobacteria	Gammaproteobacteria	5.42939	50.7	-	CBWJ01	196	5812	5073	1/2/14	8/8/17	Contig	AIT	SAMEA3138860	GCA_000529615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/615/GCA_000529615.1_IS35v1	-	IS35
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38241	65.6	-	MMWN01	24	4275	4098	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916308	GCA_001852205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/205/GCA_001852205.1_ASM185220v1	-	02-R0369
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.56565	52.3	-	JYXA01	95	4587	4360	12/22/15	3/1/17	Contig	FDA	SAMN02699279	GCA_001479785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/785/GCA_001479785.1_Salmonella_enterica_CVM_N38848-SQ_v1.0	-	CVM N38848
Staphylococcus aureus M54162	1418327	PRJNA227616	227616	Terrabacteria group	Firmicutes	2.82021	32.8	-	JGKB01	30	2920	2789	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402540	GCA_000605385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/385/GCA_000605385.1_Stap_aure_M54162_V1	-	M54162
Staphylococcus aureus M57746	1418329	PRJNA227618	227618	Terrabacteria group	Firmicutes	2.86886	32.7	-	JGKC01	38	2996	2862	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402542	GCA_000605405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/405/GCA_000605405.1_Stap_aure_M57746_V1	-	M57746
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.75642	52.2	-	JYXB01	182	4880	4597	12/22/15	3/1/17	Contig	FDA	SAMN02699280	GCA_001479805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/805/GCA_001479805.1_Salmonella_enterica_CVM_N38851-SQ_v1.0	-	CVM N38851
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41205	65.6	-	MMWO01	15	4294	4122	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916307	GCA_001852225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/225/GCA_001852225.1_ASM185222v1	-	04-R0746
Escherichia coli IS29	1432549	PRJEB4808	232418	Proteobacteria	Gammaproteobacteria	5.42425	50.6	-	CBWH01	132	5817	5203	1/2/14	3/5/17	Contig	AIT	SAMEA3138870	GCA_000529975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/975/GCA_000529975.1_IS29v1	-	IS29
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07604	39.6	-	FIEO01	31	2274	2029	2/10/16	3/13/17	Contig	SC	SAMEA2162919	GCA_900062055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/055/GCA_900062055.1_10702_5_79	-	2690STDY5561721
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	7.07309	65.8	-	NFGS01	150	6836	6613	5/15/17	6/15/17	Scaffold	Pseudomonas Italian work group	SAMN06761124	GCA_002136245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/245/GCA_002136245.1_ASM213624v1	-	S122_C02_RS
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.56045	57.3	-	FWJZ01	56	5567	5301	3/29/17	4/3/17	Scaffold	SC	SAMEA4370553	GCA_900172985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/985/GCA_900172985.1_20794_7_136	-	VRES0178
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.56776	57.3	-	FWKA01	54	5589	5281	3/29/17	4/3/17	Scaffold	SC	SAMEA4370555	GCA_900172995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/995/GCA_900172995.1_20794_7_138	-	VRES0181
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	7.05499	65.8	-	NFGT01	116	6800	6554	5/15/17	6/15/17	Scaffold	Pseudomonas Italian work group	SAMN06761123	GCA_002136275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/275/GCA_002136275.1_ASM213627v1	-	S61_C01_BS
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07568	39.6	-	FHXX01	36	2270	2026	2/10/16	3/13/17	Contig	SC	SAMEA2146870	GCA_900062185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/185/GCA_900062185.1_10678_6_56	-	2690STDY5561850
Escherichia coli EC096/10	1280937	PRJNA185968	185968	Proteobacteria	Gammaproteobacteria	4.74363	50.7	-	AONF01	62	4813	4571	2/6/14	2/25/17	Contig	Institute of Biological Science	SAMN02742054	GCA_000564835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/835/GCA_000564835.2_EC096_10.1	-	EC096/10
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38739	65.6	-	MMWM01	53	4291	4108	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916309	GCA_001852245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/245/GCA_001852245.1_ASM185224v1	-	02-R1818
"Salmonella enterica subsp. enterica serovar 4,[5],12:i:-"	440524	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.98291	52.1	-	JYXC01	164	5210	4931	12/22/15	5/30/17	Contig	FDA	SAMN02699281	GCA_001479815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/815/GCA_001479815.1_Salmonella_enterica_CVM_N38855-SQ_v1.0	-	CVM N38855
Staphylococcus aureus M79664	1418330	PRJNA227619	227619	Terrabacteria group	Firmicutes	2.89541	32.8	-	JGKD01	59	3045	2872	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402543	GCA_000605425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/425/GCA_000605425.1_Stap_aure_M79664_V1	-	M79664
Staphylococcus aureus M79673	1418332	PRJNA227621	227621	Terrabacteria group	Firmicutes	2.90683	32.8	-	JGKE01	46	3061	2889	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402545	GCA_000605445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/445/GCA_000605445.1_Stap_aure_M79673_V1	-	M79673
Salmonella enterica subsp. enterica serovar Albany	211968	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.92206	52.1	-	JYXE01	44	5004	4760	12/22/15	3/1/17	Contig	FDA	SAMN02699283	GCA_001479845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/845/GCA_001479845.1_Salmonella_enterica_CVM_N38860-SQ_v1.0	-	CVM N38860
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39015	65.6	-	MMWL01	36	4280	4091	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916310	GCA_001852265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/265/GCA_001852265.1_ASM185226v1	-	04-R0264
Escherichia coli MP1	1314835	PRJNA196008	196008	Proteobacteria	Gammaproteobacteria	4.76546	50.6	-	JEMI01	77	4903	4572	2/24/14	2/23/17	Contig	University of Pennsylvania	SAMN01998190	GCA_000576655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/576/655/GCA_000576655.1_MP1_1.0	24563035	MP1
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07467	39.6	-	FHYA01	31	2280	2031	2/10/16	3/13/17	Contig	SC	SAMEA2145462	GCA_900062195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/195/GCA_900062195.1_10678_6_59	-	2690STDY5561909
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	7.0375	65.9	-	NFGX01	100	6811	6592	5/15/17	5/24/17	Scaffold	Pseudomonas Italian work group	SAMN06761119	GCA_002136285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/285/GCA_002136285.1_ASM213628v1	-	S39_C01_BS
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.56215	57.3	-	FWKB01	54	5572	5296	3/29/17	4/3/17	Scaffold	SC	SAMEA4370554	GCA_900173005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/005/GCA_900173005.1_20794_7_137	-	VRES0179
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.4775	57.2	-	FWKC01	38	5536	5280	3/29/17	4/3/17	Scaffold	SC	SAMEA4370556	GCA_900173015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/015/GCA_900173015.1_20794_7_139	-	VRES0974
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	6.91911	65.9	-	NFGV01	160	6715	6467	5/15/17	6/15/17	Scaffold	Pseudomonas Italian work group	SAMN06761121	GCA_002136295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/295/GCA_002136295.1_ASM213629v1	-	S53_C01_BS
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.0774	39.6	-	FIBD01	32	2277	2032	2/10/16	3/13/17	Contig	SC	SAMEA2153623	GCA_900062205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/205/GCA_900062205.1_10678_7_65	-	2690STDY5561840
Escherichia coli LR09	1457192	PRJNA236731	236731	Proteobacteria	Gammaproteobacteria	5.33846	50.6	-	JDVF01	124	5495	5118	3/10/14	2/23/17	Contig	U.S. Food and Drug Administration	SAMN02639609	GCA_000586515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/586/515/GCA_000586515.1_E.coliLR09v1	24699962	LR09
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37694	65.6	-	MMWJ01	28	4274	4092	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916312	GCA_001852305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/305/GCA_001852305.1_ASM185230v1	-	02-R0981
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.72452	52.2	-	JYXF01	56	4779	4562	12/22/15	3/1/17	Contig	FDA	SAMN02699284	GCA_001479865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/865/GCA_001479865.1_Salmonella_enterica_CVM_N38861-SQ_v1.0	-	CVM N38861
Staphylococcus aureus M83332	1418333	PRJNA227622	227622	Terrabacteria group	Firmicutes	2.86984	32.8	-	JGKF01	55	3033	2856	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402546	GCA_000605465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/465/GCA_000605465.1_Stap_aure_M83332_V1	-	M83332
Staphylococcus aureus M90396	1418335	PRJNA227624	227624	Terrabacteria group	Firmicutes	2.93614	32.8	-	JGKG01	50	3092	2929	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402548	GCA_000605485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/485/GCA_000605485.1_Stap_aure_M90396_V1	-	M90396
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.72885	52.2	-	JYXI01	71	4783	4566	12/22/15	3/1/17	Contig	FDA	SAMN02699287	GCA_001479885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/885/GCA_001479885.1_Salmonella_enterica_CVM_N38869-SQ_v1.0	-	CVM N38869
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38098	65.6	-	MMWG01	3	4256	4094	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916315	GCA_001852325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/325/GCA_001852325.1_ASM185232v1	-	03-R0221
Escherichia coli	562	PRJNA239027	239027	Proteobacteria	Gammaproteobacteria	5.28201	50.6	-	JFFJ01	133	5560	5124	3/24/14	2/25/17	Contig	UC Davis	SAMN02650859	GCA_000599725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/725/GCA_000599725.2_a5_miseq_linux_20140113	25523766	UCD_JA03
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07574	39.6	-	FIBC01	36	2268	2027	2/10/16	3/13/17	Contig	SC	SAMEA2154355	GCA_900062215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/215/GCA_900062215.1_10678_7_66	-	2690STDY5561673
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	6.85166	66	-	NFFC01	162	6567	6335	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761166	GCA_002136335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/335/GCA_002136335.1_ASM213633v1	-	S854_C18_BS
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.47625	57.2	-	FWKD01	42	5539	5285	3/29/17	4/3/17	Scaffold	SC	SAMEA4370557	GCA_900173025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/025/GCA_900173025.1_20794_7_140	-	VRES0975
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.43372	57.4	-	FWKI01	50	5479	5220	3/29/17	4/3/17	Scaffold	SC	SAMEA4370562	GCA_900173035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/035/GCA_900173035.1_20794_7_145	-	VRES1174
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	7.09154	65.9	-	NFFD01	187	6981	6724	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761165	GCA_002136355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/355/GCA_002136355.1_ASM213635v1	-	S830_C17_BS
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07453	39.6	-	FIEN01	38	2280	2029	2/10/16	3/13/17	Contig	SC	SAMEA2145958	GCA_900062225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/225/GCA_900062225.1_10702_5_78	-	2690STDY5561744
Escherichia coli	562	PRJNA239028	239028	Proteobacteria	Gammaproteobacteria	5.05913	50.5	-	JFFK01	98	5226	4875	3/24/14	2/25/17	Contig	UC Davis	SAMN02650861	GCA_000599745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/745/GCA_000599745.2_a5_miseq_linux_20140113	25523766	UCD_JA17
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3548	65.6	-	MMWE01	9	4243	4081	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916317	GCA_001852335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/335/GCA_001852335.1_ASM185233v1	-	02-R1152
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.76481	52.2	-	JYXJ01	75	4874	4621	12/22/15	3/1/17	Contig	FDA	SAMN02699288	GCA_001479905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/905/GCA_001479905.1_Salmonella_enterica_CVM_N38870-SQ_v1.0	-	CVM N38870
Staphylococcus aureus T13096	1418336	PRJNA227625	227625	Terrabacteria group	Firmicutes	2.91524	32.7	-	JGKH01	55	3075	2886	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402549	GCA_000605505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/505/GCA_000605505.1_Stap_aure_T13096_V1	-	T13096
Staphylococcus aureus T13128	1418337	PRJNA227626	227626	Terrabacteria group	Firmicutes	2.89492	32.7	-	JGKI01	10	3052	2892	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402550	GCA_000605525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/525/GCA_000605525.1_Stap_aure_T13128_V1	-	T13128
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.26867	51.8	-	JYXK01	101	5451	5192	12/22/15	3/1/17	Contig	FDA	SAMN02699289	GCA_001479925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/925/GCA_001479925.1_Salmonella_enterica_CVM_N38873-R_v1.0	-	CVM N38873
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39928	65.6	-	MMWH01	2	4273	4111	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916314	GCA_001852365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/365/GCA_001852365.1_ASM185236v1	-	02-R1154
Escherichia coli	562	PRJNA239029	239029	Proteobacteria	Gammaproteobacteria	4.93279	50.5	-	JFFL01	167	5158	4671	3/24/14	2/25/17	Contig	UC Davis	SAMN02650862	GCA_000599765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/765/GCA_000599765.2_a5_miseq_linux_20140113	25523766	UCD_JA23
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07754	39.6	-	FHWN01	35	2279	2031	2/10/16	3/6/17	Contig	SC	SAMEA2144033	GCA_900062815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/815/GCA_900062815.1_10678_6_2	-	2690STDY5561756
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	7.06829	65.9	-	NFFF01	148	6954	6723	5/15/17	5/24/17	Scaffold	Pseudomonas Italian work group	SAMN06761163	GCA_002136365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/365/GCA_002136365.1_ASM213636v1	-	S827_C17_BS
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.47675	57.2	-	FWKG01	45	5541	5285	3/29/17	4/3/17	Scaffold	SC	SAMEA4370560	GCA_900173045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/045/GCA_900173045.1_20794_7_143	-	VRES0982
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.43556	57.4	-	FWKF01	51	5488	5220	3/29/17	4/3/17	Scaffold	SC	SAMEA4370564	GCA_900173055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/055/GCA_900173055.1_20794_7_147	-	VRES1173
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	6.97602	65.8	-	NFFK01	103	6674	6458	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761158	GCA_002136375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/375/GCA_002136375.1_ASM213637v1	-	S787_C16_RS
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07607	39.6	-	FHYC01	30	2279	2033	2/10/16	3/13/17	Contig	SC	SAMEA1967278	GCA_900062825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/825/GCA_900062825.1_10678_6_61	-	2690STDY5561881
Escherichia coli	562	PRJNA239030	239030	Proteobacteria	Gammaproteobacteria	5.33131	50.7	-	JFFM01	138	5706	5266	3/24/14	2/25/17	Contig	UC Davis	SAMN02650899	GCA_000599785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/785/GCA_000599785.2_a5_miseq_linux_20140113	25523766	UCD_JA62
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37939	65.6	-	MMWF01	9	4253	4090	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916316	GCA_001852405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/405/GCA_001852405.1_ASM185240v1	-	02-R0477
Salmonella enterica subsp. enterica serovar London	149390	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.87886	51.8	-	JYXN01	104	4957	4697	12/22/15	3/1/17	Contig	FDA	SAMN02699292	GCA_001479935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/935/GCA_001479935.1_Salmonella_enterica_CVM_N38882-SQ_v1.0	-	CVM N38882
Staphylococcus aureus T42547	1418338	PRJNA227627	227627	Terrabacteria group	Firmicutes	2.84567	32.7	-	JGKJ01	22	3000	2830	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402551	GCA_000605545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/545/GCA_000605545.1_Stap_aure_T42547_V1	-	T42547
Staphylococcus aureus T45836	1418340	PRJNA227629	227629	Terrabacteria group	Firmicutes	2.83587	32.7	-	JGKK01	39	2960	2832	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402553	GCA_000605565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/565/GCA_000605565.1_Stap_aure_T45836_V1	-	T45836
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.90198	52.1	-	JYXO01	71	5059	4818	12/22/15	3/1/17	Contig	FDA	SAMN02699293	GCA_001479965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/965/GCA_001479965.1_Salmonella_enterica_CVM_N38885-SQ_v1.0	-	CVM N38885
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38333	65.6	-	MMWB01	8	4255	4085	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916320	GCA_001852425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/425/GCA_001852425.1_ASM185242v1	-	02-R1955
Escherichia coli	562	PRJNA239031	239031	Proteobacteria	Gammaproteobacteria	4.7964	50.8	-	JFFN01	83	4937	4595	3/24/14	2/25/17	Contig	UC Davis	SAMN02650900	GCA_000599805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/805/GCA_000599805.2_a5_miseq_linux_20140113	25523766	UCD_JA65
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07658	39.6	-	FHXE01	30	2277	2029	2/10/16	3/13/17	Contig	SC	SAMEA2149163	GCA_900062955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/955/GCA_900062955.1_10678_6_35	-	2690STDY5561848
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	7.30175	65.6	-	NFFP01	215	7092	6794	5/15/17	6/15/17	Scaffold	Pseudomonas Italian work group	SAMN06761153	GCA_002136415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/415/GCA_002136415.1_ASM213641v1	-	S708_C14_RS
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.4785	57.2	-	FWKH01	42	5544	5283	3/29/17	4/3/17	Scaffold	SC	SAMEA4370559	GCA_900173065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/065/GCA_900173065.1_20794_7_142	-	VRES0979
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.60393	56.9	-	FWKL01	40	5591	5331	3/29/17	4/3/17	Scaffold	SC	SAMEA4370565	GCA_900173075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/075/GCA_900173075.1_20794_7_148	-	VRES1612
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	7.0308	66	-	NFGL01	551	6773	6363	5/15/17	5/24/17	Scaffold	Pseudomonas Italian work group	SAMN06761131	GCA_002136435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/435/GCA_002136435.1_ASM213643v1	-	S402_C09_RS
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07637	39.6	-	FHYD01	36	2274	2030	2/10/16	3/13/17	Contig	SC	SAMEA2149457	GCA_900062965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/965/GCA_900062965.1_10678_6_60	-	2690STDY5561917
Escherichia coli	562	PRJNA239032	239032	Proteobacteria	Gammaproteobacteria	5.20366	50.6	-	JFFO01	102	5480	5114	3/24/14	2/23/17	Contig	UC Davis	SAMN02650901	GCA_000599825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/599/825/GCA_000599825.1_a5_miseq_linux_20140113	25523766	UCD_JA69
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40621	65.6	-	MMWD01	3	4272	4111	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916318	GCA_001852445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/445/GCA_001852445.1_ASM185244v1	-	01-R1196
Salmonella enterica subsp. enterica serovar Mbandaka	192954	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.86443	52.1	-	JYXP01	139	5011	4712	12/22/15	3/1/17	Contig	FDA	SAMN02699294	GCA_001479985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/985/GCA_001479985.1_Salmonella_enterica_CVM_N38886-SQ_v1.0	-	CVM N38886
Staphylococcus aureus T45839	1418341	PRJNA227630	227630	Terrabacteria group	Firmicutes	2.89377	32.7	-	JGKL01	15	3053	2891	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402554	GCA_000605585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/585/GCA_000605585.1_Stap_aure_T45839_V1	-	T45839
Staphylococcus aureus T49198	1418343	PRJNA227632	227632	Terrabacteria group	Firmicutes	2.82829	32.8	-	JGKM01	28	2956	2799	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402556	GCA_000605605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/605/GCA_000605605.1_Stap_aure_T49198_V1	-	T49198
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.11685	51.9	-	JYXR01	78	5289	5028	12/22/15	3/1/17	Contig	FDA	SAMN02699296	GCA_001479995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/479/995/GCA_001479995.1_Salmonella_enterica_CVM_N38893-SQ_v1.0	-	CVM N38893
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40451	65.6	-	MMWC01	7	4282	4104	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916319	GCA_001852455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/455/GCA_001852455.1_ASM185245v1	-	02-R0816
Escherichia coli 1-176-05_S3_C1	1444133	PRJNA233790	233790	Proteobacteria	Gammaproteobacteria	5.3278	50.8	-	JHDG01	189	5830	5214	3/26/14	2/23/17	Contig	IGS	SAMN02680233	GCA_000601135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/135/GCA_000601135.1_ASM60113v1	-	1-176-05_S3_C1
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07396	39.6	-	FHZG01	36	2268	2029	2/10/16	3/13/17	Contig	SC	SAMEA2155886	GCA_900062975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/975/GCA_900062975.1_10678_7_2	-	2690STDY5561764
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	6.9926	66	-	NFGF01	99	6802	6609	5/15/17	5/24/17	Scaffold	Pseudomonas Italian work group	SAMN06761137	GCA_002136445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/445/GCA_002136445.1_ASM213644v1	-	S440_C09_BS
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.43227	57.4	-	FWKJ01	49	5478	5222	3/29/17	4/3/17	Scaffold	SC	SAMEA4370561	GCA_900173085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/085/GCA_900173085.1_20794_7_144	-	VRES1172
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.43489	57.4	-	FWKN01	45	5486	5224	3/29/17	4/3/17	Scaffold	SC	SAMEA4370563	GCA_900173095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/095/GCA_900173095.1_20794_7_146	-	VRES1177
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	6.92042	66	-	NFGC01	124	6655	6439	5/15/17	6/15/17	Scaffold	Pseudomonas Italian work group	SAMN06761140	GCA_002136455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/455/GCA_002136455.1_ASM213645v1	-	S461_C10_RS
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07609	39.6	-	FICR01	33	2281	2029	2/10/16	3/13/17	Contig	SC	SAMEA2147855	GCA_900062985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/985/GCA_900062985.1_10702_5_29	-	2690STDY5561666
Escherichia coli 1-110-08_S3_C1	1444132	PRJNA233789	233789	Proteobacteria	Gammaproteobacteria	5.52006	50.4	-	JHDN01	188	5883	5308	3/26/14	2/23/17	Contig	IGS	SAMN02680160	GCA_000601155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/155/GCA_000601155.1_ASM60115v1	-	1-110-08_S3_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40154	65.6	-	MMWA01	2	4261	4110	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916321	GCA_001852485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/485/GCA_001852485.1_ASM185248v1	-	03-R0278
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.92672	52.1	-	JYXT01	75	5063	4823	12/22/15	3/1/17	Contig	FDA	SAMN02699298	GCA_001480025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/025/GCA_001480025.1_Salmonella_enterica_CVM_N38903-SQ_v1.0	-	CVM N38903
Staphylococcus aureus T49201	1418344	PRJNA227633	227633	Terrabacteria group	Firmicutes	2.82558	32.8	-	JGKN01	34	2933	2795	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402557	GCA_000605625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/625/GCA_000605625.1_Stap_aure_T49201_V1	-	T49201
Staphylococcus aureus T52642	1418345	PRJNA227634	227634	Terrabacteria group	Firmicutes	2.89445	32.7	-	JGKO01	13	3056	2893	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402558	GCA_000605645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/645/GCA_000605645.1_Stap_aure_T52642_V1	-	T52642
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.02598	52	-	JYXU01	83	5142	4839	12/22/15	3/1/17	Contig	FDA	SAMN02699299	GCA_001480045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/045/GCA_001480045.1_Salmonella_enterica_CVM_N38909-SQ_v1.0	-	CVM N38909
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38253	65.6	-	MMVZ01	3	4261	4095	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916322	GCA_001852495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/495/GCA_001852495.1_ASM185249v1	-	02-R0987
Escherichia coli 1-110-08_S3_C2	1444160	PRJNA233817	233817	Proteobacteria	Gammaproteobacteria	5.48914	50.4	-	JHDM01	176	5840	5328	3/26/14	2/23/17	Contig	IGS	SAMN02680144	GCA_000601175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/175/GCA_000601175.1_ASM60117v1	-	1-110-08_S3_C2
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07274	39.6	-	FICT01	30	2273	2032	2/10/16	3/13/17	Contig	SC	SAMEA2157195	GCA_900062995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/995/GCA_900062995.1_10702_5_3	-	2690STDY5561924
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	7.15295	65.7	-	NFGP01	155	6932	6664	5/15/17	5/24/17	Scaffold	Pseudomonas Italian work group	SAMN06761127	GCA_002136495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/495/GCA_002136495.1_ASM213649v1	-	S220_C06_RS
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.41185	57.3	-	FWKM01	36	5382	5140	3/29/17	4/3/17	Scaffold	SC	SAMEA4370567	GCA_900173105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/105/GCA_900173105.1_20794_7_150	-	VRES1248
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.53447	57.1	-	FWKK01	44	5560	5276	3/29/17	4/3/17	Scaffold	SC	SAMEA4370566	GCA_900173115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/115/GCA_900173115.1_20794_7_149	-	VRES1618
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	7.00385	65.8	-	NFGQ01	162	6745	6486	5/15/17	5/24/17	Scaffold	Pseudomonas Italian work group	SAMN06761126	GCA_002136515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/515/GCA_002136515.1_ASM213651v1	-	S143_C02_RS
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07736	39.6	-	FIEB01	35	2281	2029	2/10/16	3/13/17	Contig	SC	SAMEA2149883	GCA_900063005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/005/GCA_900063005.1_10702_5_68	-	2690STDY5561700
Escherichia coli 1-176-05_S3_C2	1444161	PRJNA233818	233818	Proteobacteria	Gammaproteobacteria	4.45784	50.7	-	JHDF01	68	4491	4094	3/26/14	2/23/17	Contig	IGS	SAMN02687529	GCA_000601195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/195/GCA_000601195.1_ASM60119v1	-	1-176-05_S3_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38843	65.6	-	MMVX01	10	4261	4097	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916324	GCA_001852535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/535/GCA_001852535.1_ASM185253v1	-	99-R962
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.89038	52.2	-	JYXX01	89	5022	4789	12/22/15	3/1/17	Contig	FDA	SAMN02699302	GCA_001480055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/055/GCA_001480055.1_Salmonella_enterica_CVM_N38917-SQ_v1.0	-	CVM N38917
Staphylococcus aureus T52649	1418346	PRJNA227635	227635	Terrabacteria group	Firmicutes	2.93855	32.7	-	JGKP01	15	3101	2947	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402559	GCA_000605665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/665/GCA_000605665.1_Stap_aure_T52649_V1	-	T52649
Staphylococcus aureus T55950	1418347	PRJNA227636	227636	Terrabacteria group	Firmicutes	2.93935	32.8	-	JGKQ01	16	3130	2958	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402560	GCA_000605685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/685/GCA_000605685.1_Stap_aure_T55950_V1	-	T55950
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.05114	52.1	-	JYXY01	129	5222	4957	12/22/15	3/1/17	Contig	FDA	SAMN02699303	GCA_001480085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/085/GCA_001480085.1_Salmonella_enterica_CVM_N38921-SQ_v1.0	-	CVM N38921
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39642	65.6	-	MMVY01	3	4277	4113	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916323	GCA_001852575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/575/GCA_001852575.1_ASM185257v1	-	02-R1669
Escherichia coli 1-110-08_S4_C2	1444243	PRJNA233900	233900	Proteobacteria	Gammaproteobacteria	5.21975	50.8	-	JHDJ01	199	5647	5053	3/26/14	2/23/17	Contig	IGS	SAMN02680199	GCA_000601215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/215/GCA_000601215.1_ASM60121v1	-	1-110-08_S4_C2
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07605	39.6	-	FIDA01	29	2276	2031	2/10/16	3/13/17	Contig	SC	SAMEA2144268	GCA_900063225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/225/GCA_900063225.1_10702_5_4	-	2690STDY5561923
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	7.03897	65.9	-	NFGW01	103	6820	6595	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761120	GCA_002136525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/525/GCA_002136525.1_ASM213652v1	-	S49_C01_BS
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.41072	57.3	-	FWKP01	35	5384	5134	3/29/17	4/3/17	Scaffold	SC	SAMEA4370569	GCA_900173125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/125/GCA_900173125.1_20794_7_152	-	VRES1238
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.40994	57.3	-	FWLB01	36	5377	5134	3/29/17	4/3/17	Scaffold	SC	SAMEA4370568	GCA_900173135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/135/GCA_900173135.1_20794_7_151	-	VRES1243
Pseudomonas aeruginosa	287	PRJNA383293	383293	Proteobacteria	Gammaproteobacteria	6.92267	65.9	-	NFGU01	193	6737	6468	5/15/17	5/23/17	Scaffold	Pseudomonas Italian work group	SAMN06761122	GCA_002136535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/136/535/GCA_002136535.1_ASM213653v1	-	S57_C01_BS
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07757	39.6	-	FIDD01	29	2282	2035	2/10/16	3/6/17	Contig	SC	SAMEA2144118	GCA_900063235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/235/GCA_900063235.1_10702_5_40	-	2690STDY5561808
Escherichia coli 1-110-08_S4_C3	1444272	PRJNA233929	233929	Proteobacteria	Gammaproteobacteria	5.20002	50.8	-	JHDI01	196	5585	5031	3/26/14	2/23/17	Contig	IGS	SAMN02687480	GCA_000601235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/235/GCA_000601235.1_ASM60123v1	-	1-110-08_S4_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40255	65.6	-	MMVT01	11	4267	4111	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916328	GCA_001852605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/605/GCA_001852605.1_ASM185260v1	-	02-R0804
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.94892	52.1	-	JYYB01	88	5071	4825	12/22/15	3/1/17	Contig	FDA	SAMN02699306	GCA_001480105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/105/GCA_001480105.1_Salmonella_enterica_CVM_N38943-SQ_v1.0	-	CVM N38943
Staphylococcus aureus T55954	1418348	PRJNA227637	227637	Terrabacteria group	Firmicutes	2.77196	32.7	-	JGKR01	43	2888	2696	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402561	GCA_000605705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/705/GCA_000605705.1_Stap_aure_T55954_V1	-	T55954
Staphylococcus aureus T59618	1418349	PRJNA227638	227638	Terrabacteria group	Firmicutes	2.74498	32.7	-	JGKS01	27	2850	2690	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402562	GCA_000605725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/725/GCA_000605725.1_Stap_aure_T59618_V1	-	T59618
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.95559	52.1	-	JYYA01	86	5083	4822	12/22/15	3/1/17	Contig	FDA	SAMN02699305	GCA_001480115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/115/GCA_001480115.1_Salmonella_enterica_CVM_N38929-SQ_v1.0	-	CVM N38929
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36562	65.6	-	MMVU01	20	4261	4073	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916327	GCA_001852625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/625/GCA_001852625.1_ASM185262v1	-	03-R0131
Escherichia coli 1-176-05_S1_C1	1444050	PRJNA233707	233707	Proteobacteria	Gammaproteobacteria	5.13251	50.8	-	JHDH01	172	5356	4823	3/26/14	2/23/17	Contig	IGS	SAMN02687542	GCA_000601255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/255/GCA_000601255.1_ASM60125v1	-	1-176-05_S1_C1
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07662	39.6	-	FIEY01	30	2268	2029	2/10/16	3/13/17	Contig	SC	SAMEA2147176	GCA_900063245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/245/GCA_900063245.1_10702_5_89	-	2690STDY5561743
Pseudomonas aeruginosa	287	PRJNA325248	325248	Proteobacteria	Gammaproteobacteria	6.23854	66.6	-	MVHB01	23	5934	5775	7/28/17	8/1/17	Scaffold	International Pseudomonas aeruginosa Consortium	SAMN06320151	GCA_002237055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/055/GCA_002237055.1_ASM223705v1	-	ATCC BAA-2114
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.56224	57.3	-	FWKS01	49	5562	5306	3/29/17	4/3/17	Scaffold	SC	SAMEA4370573	GCA_900173145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/145/GCA_900173145.1_20794_7_156	-	VRES0182
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.56646	57.3	-	FWKO01	52	5555	5303	3/29/17	4/3/17	Scaffold	SC	SAMEA4370571	GCA_900173155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/155/GCA_900173155.1_20794_7_154	-	VRES0175
Pseudomonas aeruginosa	287	PRJNA286991	286991	Proteobacteria	Gammaproteobacteria	7.1947	66	-	LFDE01	114	7044	6783	8/7/17	8/9/17	Scaffold	Aravind Medical Research Foundation	SAMN03775026	GCA_002242775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/775/GCA_002242775.1_ASM224277v1	-	BK3
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07494	39.6	-	FIEZ01	29	2277	2030	2/10/16	3/13/17	Contig	SC	SAMEA2157058	GCA_900063255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/255/GCA_900063255.1_10702_5_9	-	2690STDY5561691
Escherichia coli 1-110-08_S1_C2	1444077	PRJNA233734	233734	Proteobacteria	Gammaproteobacteria	5.01073	50.7	-	JHDP01	137	5271	4842	3/26/14	2/23/17	Contig	IGS	SAMN02680152	GCA_000601275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/275/GCA_000601275.1_ASM60127v1	-	1-110-08_S1_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.4111	65.6	-	MMVS01	2	4286	4118	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916329	GCA_001852665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/665/GCA_001852665.1_ASM185266v1	-	04-R0275
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.9923	52.1	-	JYYH01	147	5173	4910	12/22/15	3/1/17	Contig	FDA	SAMN02699311	GCA_001480145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/145/GCA_001480145.1_Salmonella_enterica_CVM_N40368-SQ_v1.0	-	CVM N40368
Staphylococcus aureus T66622	1418350	PRJNA227639	227639	Terrabacteria group	Firmicutes	2.91239	32.7	-	JGKT01	13	3085	2935	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402563	GCA_000605745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/745/GCA_000605745.1_Stap_aure_T66622_V1	-	T66622
Staphylococcus aureus T66632	1418351	PRJNA227640	227640	Terrabacteria group	Firmicutes	2.88959	32.7	-	JGKU01	13	3048	2885	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402564	GCA_000605765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/765/GCA_000605765.1_Stap_aure_T66632_V1	-	T66632
Salmonella enterica subsp. enterica serovar Worthington	1160769	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.82576	52.2	-	JYYI01	78	4906	4631	12/22/15	3/1/17	Contig	FDA	SAMN02699312	GCA_001480165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/165/GCA_001480165.1_Salmonella_enterica_CVM_N40374-SQ_v1.0	-	CVM N40374
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38862	65.6	-	MMVQ01	6	4262	4098	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916331	GCA_001852685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/685/GCA_001852685.1_ASM185268v1	-	02-R1131
Escherichia coli 1-110-08_S1_C3	1444104	PRJNA233761	233761	Proteobacteria	Gammaproteobacteria	4.95326	50.7	-	JHDO01	133	5301	4800	3/26/14	2/23/17	Contig	IGS	SAMN02687495	GCA_000601295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/295/GCA_000601295.1_ASM60129v1	-	1-110-08_S1_C3
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07534	39.6	-	FIFA01	32	2281	2030	2/10/16	3/13/17	Contig	SC	SAMEA2162950	GCA_900063265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/265/GCA_900063265.1_10702_5_90	-	2690STDY5561686
Pseudomonas aeruginosa	287	PRJNA287110	287110	Proteobacteria	Gammaproteobacteria	7.05685	65.8	-	LFDH01	142	6763	6493	8/7/17	8/9/17	Scaffold	Aravind Medical Research Foundation	SAMN03776167	GCA_002242855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/855/GCA_002242855.1_ASM224285v1	-	BK6
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.43365	57.4	-	FWKT01	47	5477	5217	3/29/17	4/3/17	Scaffold	SC	SAMEA4370570	GCA_900173165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/165/GCA_900173165.1_20794_7_153	-	VRES1458
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.5626	57.3	-	FWKQ01	49	5562	5301	3/29/17	4/3/17	Scaffold	SC	SAMEA4370572	GCA_900173175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/175/GCA_900173175.1_20794_7_155	-	VRES0180
Pseudomonas aeruginosa	287	PRJNA287086	287086	Proteobacteria	Gammaproteobacteria	6.40934	66.4	-	LFDF01	68	6142	5964	8/7/17	8/9/17	Scaffold	Aravind Medical Research Foundation	SAMN03776115	GCA_002242885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/885/GCA_002242885.1_ASM224288v1	-	BK4
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07484	39.6	-	FHXP01	34	2281	2033	2/10/16	3/13/17	Contig	SC	SAMEA2161031	GCA_900063495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/495/GCA_900063495.1_10678_6_47	-	2690STDY5561890
Escherichia coli 1-110-08_S1_C1	1444049	PRJNA233706	233706	Proteobacteria	Gammaproteobacteria	4.91029	50.7	-	JHDQ01	128	5241	4746	3/26/14	2/23/17	Contig	IGS	SAMN02680001	GCA_000601315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/315/GCA_000601315.1_ASM60131v1	-	1-110-08_S1_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38499	65.6	-	MMVP01	2	4251	4094	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916332	GCA_001852705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/705/GCA_001852705.1_ASM185270v1	-	99-R665
Salmonella enterica subsp. enterica serovar Reading	165302	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.64117	52.1	-	JYYJ01	52	4727	4460	12/22/15	3/1/17	Contig	FDA	SAMN02699313	GCA_001480185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/185/GCA_001480185.1_Salmonella_enterica_CVM_N40375-R_v1.0	-	CVM N40375
Staphylococcus aureus T70161	1418352	PRJNA227641	227641	Terrabacteria group	Firmicutes	2.87316	32.7	-	JGKV01	10	3029	2873	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402565	GCA_000605785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/785/GCA_000605785.1_Stap_aure_T70161_V1	-	T70161
Staphylococcus aureus T83543	1418353	PRJNA227642	227642	Terrabacteria group	Firmicutes	2.86077	32.8	-	JGKW01	1	3007	2847	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402566	GCA_000605805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/805/GCA_000605805.1_Stap_aure_T83543_V1	-	T83543
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.05121	52	-	JYYK01	162	5224	4937	12/22/15	3/1/17	Contig	FDA	SAMN02699314	GCA_001480205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/205/GCA_001480205.1_Salmonella_enterica_CVM_N40379-SQ_v1.0	-	CVM N40379
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36656	65.6	-	MMVN01	4	4250	4081	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916334	GCA_001852725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/725/GCA_001852725.1_ASM185272v1	-	02-R1864
Escherichia coli 1-110-08_S3_C3	1444190	PRJNA233847	233847	Proteobacteria	Gammaproteobacteria	5.51429	50.4	-	JHDL01	175	5868	5334	3/26/14	2/23/17	Contig	IGS	SAMN02680172	GCA_000601335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/335/GCA_000601335.1_ASM60133v1	-	1-110-08_S3_C3
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.0743	39.6	-	FHYK01	35	2284	2028	2/10/16	3/6/17	Contig	SC	SAMEA2146228	GCA_900063505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/505/GCA_900063505.1_10678_6_71	-	2690STDY5561858
Pseudomonas aeruginosa	287	PRJNA287106	287106	Proteobacteria	Gammaproteobacteria	6.36467	66.4	-	LFDG01	71	6041	5873	8/7/17	8/9/17	Scaffold	Aravind Medical Research Foundation	SAMN03776163	GCA_002242915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/915/GCA_002242915.1_ASM224291v1	-	BK5
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.43521	57.4	-	FWKR01	51	5485	5225	3/29/17	4/3/17	Scaffold	SC	SAMEA4370574	GCA_900173185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/185/GCA_900173185.1_20794_7_157	-	VRES1178
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.54573	57.9	-	FWKW01	27	5467	5175	3/29/17	4/3/17	Scaffold	SC	SAMEA4362595	GCA_900173195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/195/GCA_900173195.1_20794_7_159	-	VRCO0183
Pseudomonas aeruginosa	287	PRJNA286827	286827	Proteobacteria	Gammaproteobacteria	6.38615	66.4	-	LEOT01	50	6054	5891	8/7/17	8/9/17	Scaffold	Aravind Medical Research Foundation	SAMN03770910	GCA_002243265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/265/GCA_002243265.1_ASM224326v1	-	BK2
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07835	39.6	-	FIAL01	32	2284	2031	2/10/16	3/13/17	Contig	SC	SAMEA2147526	GCA_900063515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/515/GCA_900063515.1_10678_7_49	-	2690STDY5561761
Escherichia coli 1-110-08_S4_C1	1444215	PRJNA233872	233872	Proteobacteria	Gammaproteobacteria	5.4981	50.5	-	JHDK01	159	5868	5344	3/26/14	2/23/17	Contig	IGS	SAMN02680218	GCA_000601355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/355/GCA_000601355.1_ASM60135v1	-	1-110-08_S4_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37987	65.6	-	MMVO01	11	4245	4088	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916333	GCA_001852735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/735/GCA_001852735.1_ASM185273v1	-	01-R0956
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.0769	52	-	JYYL01	92	5227	4963	12/22/15	3/1/17	Contig	FDA	SAMN02699315	GCA_001480225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/225/GCA_001480225.1_Salmonella_enterica_CVM_N40384-R_v1.0	-	CVM N40384
Staphylococcus aureus T83563	1418354	PRJNA227643	227643	Terrabacteria group	Firmicutes	2.89181	32.7	-	JGKX01	20	3061	2894	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402567	GCA_000605825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/825/GCA_000605825.1_Stap_aure_T83563_V1	-	T83563
Staphylococcus aureus T86825	1418355	PRJNA227644	227644	Terrabacteria group	Firmicutes	2.89328	32.7	-	JGKY01	19	3057	2894	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402568	GCA_000605845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/845/GCA_000605845.1_Stap_aure_T86825_V1	-	T86825
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.08227	51.9	-	JYYN01	122	5293	4924	12/22/15	3/1/17	Contig	FDA	SAMN02699317	GCA_001480245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/245/GCA_001480245.1_Salmonella_enterica_CVM_N40387-SQ_v1.0	-	CVM N40387
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35259	65.6	-	MMVM01	6	4234	4071	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916335	GCA_001852755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/755/GCA_001852755.1_ASM185275v1	-	01-R1428
Escherichia coli O157:H7 str. 2011EL-2114	1446644	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.35131	50.3	-	JHKH01	96	5701	5261	4/7/14	2/23/17	Contig	CDC	SAMN02353058	GCA_000614255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/255/GCA_000614255.1_Ec2011EL-2114	25103754	2011EL-2114
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07579	39.6	-	FICN01	34	2284	2032	2/10/16	3/6/17	Contig	SC	SAMEA2145941	GCA_900063525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/525/GCA_900063525.1_10702_5_25	-	2690STDY5561687
Pseudomonas aeruginosa	287	PRJNA395360	395360	Proteobacteria	Gammaproteobacteria	6.51474	66.4	-	NOKO01	37	6179	6038	8/14/17	8/16/17	Scaffold	FIOCRUZ	SAMN07376118	GCA_002251125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/125/GCA_002251125.1_ASM225112v1	-	CCBH17348
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.54372	57.9	-	FWKV01	32	5449	5168	3/29/17	4/3/17	Scaffold	SC	SAMEA4362597	GCA_900173205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/205/GCA_900173205.1_20794_7_161	-	VRCO0186
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.54365	57.9	-	FWLC01	36	5458	5172	3/29/17	4/3/17	Scaffold	SC	SAMEA4362598	GCA_900173215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/215/GCA_900173215.1_20794_7_162	-	VRCO0189
Pseudomonas aeruginosa	287	PRJNA394047	394047	Proteobacteria	Gammaproteobacteria	6.93487	66	-	NMRR01	69	6756	6556	8/22/17	8/24/17	Scaffold	"Atmosphere and Ocean Research Institute, The University of Tokyo"	SAMN07347488	GCA_002263575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/575/GCA_002263575.1_ASM226357v1	-	Ocean-222
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07527	39.6	-	FIDY01	30	2281	2028	2/10/16	3/6/17	Contig	SC	SAMEA2150764	GCA_900063535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/535/GCA_900063535.1_10702_5_62	-	2690STDY5561768
Escherichia coli O121:H19 str. 2010C-4989	1446567	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.14876	50.4	-	JHMJ01	84	5484	5006	4/7/14	2/23/17	Contig	CDC	SAMN02353008	GCA_000614515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/515/GCA_000614515.1_Ec2010C-4989	25103754	2010C-4989
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39477	65.6	-	MMVL01	4	4270	4107	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916336	GCA_001852785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/785/GCA_001852785.1_ASM185278v1	-	99-R0902
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.04791	52.1	-	JYYR01	128	5173	4913	12/22/15	3/1/17	Contig	FDA	SAMN02699321	GCA_001480265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/265/GCA_001480265.1_Salmonella_enterica_CVM_N40416-SQ_v1.0	-	CVM N40416
Staphylococcus aureus W19220	1418356	PRJNA227645	227645	Terrabacteria group	Firmicutes	2.88334	32.7	-	JGKZ01	41	2998	2854	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402569	GCA_000605865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/865/GCA_000605865.1_Stap_aure_W19220_V1	-	W19220
Staphylococcus aureus W25787	1418358	PRJNA227647	227647	Terrabacteria group	Firmicutes	2.88762	32.8	-	JGLA01	42	3030	2868	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402571	GCA_000605885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/885/GCA_000605885.1_Stap_aure_W25787_V1	-	W25787
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.02525	52	-	JYYT01	88	5156	4912	12/22/15	3/1/17	Contig	FDA	SAMN02699323	GCA_001480285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/285/GCA_001480285.1_Salmonella_enterica_CVM_N40935-SQ_v1.0	-	CVM N40935
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37189	65.5	-	MMVI01	98	4302	4113	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916339	GCA_001852825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/825/GCA_001852825.1_ASM185282v1	-	02-R1592
Escherichia coli O157:H7 str. 2009EL1705	1446619	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.33363	50.3	-	JHGE01	113	5741	5268	4/7/14	2/23/17	Contig	CDC	SAMN02352956	GCA_000614965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/965/GCA_000614965.1_Ec2009EL1705	25103754	2009EL1705
Streptococcus pneumoniae	1313	PRJEB2102	203746	Terrabacteria group	Firmicutes	2.10803	39.6	-	FITU01	42	2364	2101	2/10/16	3/13/17	Contig	SC	SAMEA685653	GCA_900063705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/705/GCA_900063705.1_4752_1_9	-	C14599
Pseudomonas aeruginosa	287	PRJNA394047	394047	Proteobacteria	Gammaproteobacteria	7.06796	65.9	-	NMRQ01	90	6869	6640	8/22/17	8/24/17	Scaffold	"Atmosphere and Ocean Research Institute, The University of Tokyo"	SAMN07347489	GCA_002263585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/585/GCA_002263585.1_ASM226358v1	-	Ocean-1187
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.54659	57.9	-	FWKU01	29	5482	5202	3/29/17	6/9/17	Scaffold	SC	SAMEA4362596	GCA_900173225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/225/GCA_900173225.1_20794_7_160	-	VRCO0184
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.30753	57.5	-	FWKX01	38	5301	5085	3/29/17	4/3/17	Scaffold	SC	SAMEA4362600	GCA_900173235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/235/GCA_900173235.1_20794_7_164	-	VRCO0213
Pseudomonas aeruginosa	287	PRJNA394047	394047	Proteobacteria	Gammaproteobacteria	6.905	66.1	-	NMRP01	76	6682	6468	8/22/17	8/24/17	Scaffold	"Atmosphere and Ocean Research Institute, The University of Tokyo"	SAMN07347490	GCA_002263615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/615/GCA_002263615.1_ASM226361v1	-	Ocean-1206
Streptococcus pneumoniae	1313	PRJEB2102	203746	Terrabacteria group	Firmicutes	2.11006	39.6	-	FIVF01	33	2361	2095	2/10/16	3/13/17	Contig	SC	SAMEA685615	GCA_900063715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/715/GCA_900063715.1_4525_7_11	-	B10454
Escherichia coli O157:H7 str. 2009EL2109	1446621	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.38488	50.4	-	JHGC01	124	5830	5340	4/7/14	2/23/17	Contig	CDC	SAMN02352958	GCA_000615015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/015/GCA_000615015.1_Ec2009EL2109	25103754	2009EL2109
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39657	65.6	-	MMVE01	66	4316	4115	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916343	GCA_001852895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/895/GCA_001852895.1_ASM185289v1	-	98-10534
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.85377	52.1	-	JYYV01	66	5004	4687	12/22/15	3/1/17	Contig	FDA	SAMN02699325	GCA_001480305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/305/GCA_001480305.1_Salmonella_enterica_CVM_N41733-SQ_v1.0	-	CVM N41733
Staphylococcus aureus W25814	1418359	PRJNA227648	227648	Terrabacteria group	Firmicutes	2.90298	32.7	-	JGLB01	58	3056	2881	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402572	GCA_000605905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/905/GCA_000605905.1_Stap_aure_W25814_V1	-	W25814
Staphylococcus aureus W32014	1418360	PRJNA227649	227649	Terrabacteria group	Firmicutes	2.836	32.8	-	JGLC01	44	2952	2807	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402573	GCA_000605925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/925/GCA_000605925.1_Stap_aure_W32014_V1	-	W32014
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.90944	52.1	-	JYYW01	115	5063	4764	12/22/15	3/1/17	Contig	FDA	SAMN02699326	GCA_001480325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/325/GCA_001480325.1_Salmonella_enterica_CVM_N41734-SQ_v1.0	-	CVM N41734
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41209	65.6	-	MMVH01	27	4306	4127	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916340	GCA_001852925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/925/GCA_001852925.1_ASM185292v1	-	02-R1862
Escherichia coli O103:H11 str. 2010C-3214	1446502	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.39818	50.4	-	JHFY01	113	5883	5424	4/7/14	2/23/17	Contig	CDC	SAMN02352962	GCA_000615055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/055/GCA_000615055.1_Ec2010C-3214	25103754	2010C-3214
Streptococcus pneumoniae	1313	PRJEB2110	203866	Terrabacteria group	Firmicutes	2.09415	39.6	-	FIXP01	99	2344	2061	2/10/16	3/13/17	Contig	SC	SAMEA971475	GCA_900063755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/755/GCA_900063755.1_4995_8_3	-	D31827
Pseudomonas aeruginosa	287	PRJNA394047	394047	Proteobacteria	Gammaproteobacteria	6.63963	66.2	-	NMRS01	46	6335	6152	8/22/17	8/24/17	Scaffold	"Atmosphere and Ocean Research Institute, The University of Tokyo"	SAMN07347487	GCA_002263645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/645/GCA_002263645.1_ASM226364v1	-	Ocean-100
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.56115	57.3	-	FWKZ01	52	5558	5302	3/29/17	4/3/17	Scaffold	SC	SAMEA4370575	GCA_900173245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/245/GCA_900173245.1_20794_7_158	-	VRES0177
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.30647	58.2	-	FWKY01	26	5169	4931	3/29/17	4/3/17	Scaffold	SC	SAMEA4362599	GCA_900173255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/255/GCA_900173255.1_20794_7_163	-	VRCO0210
Pseudomonas aeruginosa	287	PRJNA399624	399624	Proteobacteria	Gammaproteobacteria	6.36644	65.7	-	NRIT01	358	6230	4608	9/12/17	9/12/17	Scaffold	Chonnam National University	SAMN07541917	GCA_002290825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/825/GCA_002290825.1_ASM229082v1	-	QSD3
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.04966	39.6	-	FIXN01	39	2245	2025	2/10/16	3/5/17	Contig	SC	SAMEA1033754	GCA_900063765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/765/GCA_900063765.1_7004_3_32	-	B20605
Escherichia coli O145:NM str. 2010C-3507	1446587	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.43338	50.4	-	JHFW01	110	5807	5263	4/7/14	2/23/17	Contig	CDC	SAMN02352965	GCA_000615085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/085/GCA_000615085.1_Ec2010C-3507	25103754	2010C-3507
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39209	65.6	-	MMVD01	32	4277	4091	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916344	GCA_001852935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/935/GCA_001852935.1_ASM185293v1	-	98-R450
Salmonella enterica subsp. enterica serovar Braenderup	149391	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.75575	52.2	-	JYYY01	118	4832	4591	12/22/15	3/1/17	Contig	FDA	SAMN02699328	GCA_001480345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/345/GCA_001480345.1_Salmonella_enterica_CVM_N41747-SQ_v1.0	-	CVM N41747
Staphylococcus aureus W38532	1418362	PRJNA227651	227651	Terrabacteria group	Firmicutes	2.86387	32.7	-	JGLD01	35	3027	2858	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402575	GCA_000605945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/945/GCA_000605945.1_Stap_aure_W38532_V1	-	W38532
Staphylococcus aureus W42255	1418364	PRJNA227653	227653	Terrabacteria group	Firmicutes	2.89408	32.7	-	JGLE01	14	3052	2898	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402577	GCA_000605965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/965/GCA_000605965.1_Stap_aure_W42255_V1	-	W42255
"Salmonella enterica subsp. enterica serovar 4,[5],12:i:-"	440524	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.01441	52	-	JYYZ01	126	5175	4897	12/22/15	5/30/17	Contig	FDA	SAMN02699329	GCA_001480365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/365/GCA_001480365.1_Salmonella_enterica_CVM_N41895-SQ_v1.0	-	CVM N41895
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40148	65.6	-	MMVA01	26	4294	4097	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916347	GCA_001853005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/005/GCA_001853005.1_ASM185300v1	-	98-R133
Escherichia coli O145:NM str. 2010C-3509	1446589	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.38886	50.5	-	JHFU01	125	5770	5192	4/7/14	2/23/17	Contig	CDC	SAMN02352967	GCA_000615145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/145/GCA_000615145.1_Ec2010C-3509	25103754	2010C-3509
Streptococcus pneumoniae	1313	PRJEB2110	203866	Terrabacteria group	Firmicutes	2.1654	39.5	-	FIXZ01	59	2412	2174	2/10/16	3/13/17	Contig	SC	SAMEA971379	GCA_900063775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/775/GCA_900063775.1_4995_8_4	-	D33293
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.87357	66	-	MWXS01	92	6594	6304	9/19/17	9/21/17	Scaffold	Universite Laval	SAMN06547043	GCA_002312245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/245/GCA_002312245.1_ASM231224v1	-	PPF-21
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.26802	57.5	-	FWLA01	35	5230	4993	3/29/17	4/3/17	Scaffold	SC	SAMEA4362601	GCA_900173265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/265/GCA_900173265.1_20794_7_165	-	VRCO0234
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.26473	57.5	-	FWLF01	38	5219	4994	3/29/17	4/3/17	Scaffold	SC	SAMEA4362603	GCA_900173275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/275/GCA_900173275.1_20794_7_167	-	VRCO0236
Pseudomonas aeruginosa	287	PRJNA378495	378495	Proteobacteria	Gammaproteobacteria	6.49284	66.2	-	MWYF01	39	6241	6056	9/19/17	9/21/17	Scaffold	Universite Laval	SAMN06547030	GCA_002312355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/312/355/GCA_002312355.1_ASM231235v1	-	578-A
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07405	39.6	-	FHXD01	28	2270	2030	2/10/16	3/13/17	Contig	SC	SAMEA2147597	GCA_900063975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/975/GCA_900063975.1_10678_6_34	-	2690STDY5561886
Escherichia coli O145:NM str. 2010C-3510	1446590	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.36491	50.4	-	JHFT01	104	5715	5187	4/7/14	2/23/17	Contig	CDC	SAMN02352968	GCA_000615175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/175/GCA_000615175.1_Ec2010C-3510	25103754	2010C-3510
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35746	65.6	-	MMUZ01	14	4253	4099	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916348	GCA_001853025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/025/GCA_001853025.1_ASM185302v1	-	99-R322
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.94374	52.1	-	JYZB01	82	5085	4839	12/22/15	3/1/17	Contig	FDA	SAMN02699331	GCA_001480385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/385/GCA_001480385.1_Salmonella_enterica_CVM_N41904-SQ_v1.0	-	CVM N41904
Staphylococcus aureus W42298_110712	1418366	PRJNA227655	227655	Terrabacteria group	Firmicutes	2.7715	32.7	-	JGLF01	59	2882	2700	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402579	GCA_000605985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/605/985/GCA_000605985.1_Stap_aure_W42298_110712_V1	-	W42298_110712
Staphylococcus aureus W45747	1418367	PRJNA227656	227656	Terrabacteria group	Firmicutes	2.84459	32.8	-	JGLG01	49	3013	2846	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402580	GCA_000606005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/005/GCA_000606005.1_Stap_aure_W45747_V1	-	W45747
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.00925	51.9	-	JYZH01	94	5118	4811	12/22/15	3/1/17	Contig	FDA	SAMN02699337	GCA_001480405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/405/GCA_001480405.1_Salmonella_enterica_CVM_N42233-SQ_v1.0	-	CVM N42233
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3526	65.6	-	MMUY01	20	4248	4076	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916349	GCA_001853035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/035/GCA_001853035.1_ASM185303v1	-	99-10364
Escherichia coli O145:NM str. 2010C-3516	1446592	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.43464	50.5	-	JHFR01	108	5824	5267	4/7/14	2/23/17	Contig	CDC	SAMN02352970	GCA_000615265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/265/GCA_000615265.1_Ec2010C-3516	25103754	2010C-3516
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07532	39.6	-	FHXF01	31	2281	2031	2/10/16	3/13/17	Contig	SC	SAMEA2163493	GCA_900063985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/985/GCA_900063985.1_10678_6_36	-	2690STDY5561852
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.59069	57.4	-	FWLD01	28	5572	5334	3/29/17	4/3/17	Scaffold	SC	SAMEA4362604	GCA_900173285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/285/GCA_900173285.1_20794_7_168	-	VRCO0244
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.30812	57.4	-	FWLE01	39	5280	5044	3/29/17	4/3/17	Scaffold	SC	SAMEA4362602	GCA_900173295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/295/GCA_900173295.1_20794_7_166	-	VRCO0235
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07459	39.6	-	FIBF01	34	2283	2033	2/10/16	3/15/17	Contig	SC	SAMEA2151978	GCA_900063995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/995/GCA_900063995.1_10678_7_68	-	2690STDY5561675
Escherichia coli O145:NM str. 2010C-3517	1446593	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.49874	50.5	-	JHFQ01	143	5932	5337	4/7/14	2/23/17	Contig	CDC	SAMN02352971	GCA_000615305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/305/GCA_000615305.1_Ec2010C-3517	25103754	2010C-3517
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39908	65.6	-	MMUX01	55	4294	4115	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916350	GCA_001853045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/045/GCA_001853045.1_ASM185304v1	-	98-R188
Salmonella enterica subsp. enterica serovar Braenderup	149391	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.80599	52.1	-	JYZI01	88	4915	4671	12/22/15	3/1/17	Contig	FDA	SAMN02699338	GCA_001480425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/425/GCA_001480425.1_Salmonella_enterica_CVM_N42235-SQ_v1.0	-	CVM N42235
Staphylococcus aureus W45750	1418368	PRJNA227657	227657	Terrabacteria group	Firmicutes	2.96966	32.7	-	JGLH01	31	3157	2985	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402581	GCA_000606025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/025/GCA_000606025.1_Stap_aure_W45750_V1	-	W45750
Staphylococcus aureus W52294	1418369	PRJNA227658	227658	Terrabacteria group	Firmicutes	2.85499	32.8	-	JGLI01	21	3017	2852	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402582	GCA_000606045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/045/GCA_000606045.1_Stap_aure_W52294_V1	-	W52294
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.75043	52.1	-	JYZK01	79	4847	4609	12/22/15	3/1/17	Contig	FDA	SAMN02699340	GCA_001480445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/445/GCA_001480445.1_Salmonella_enterica_CVM_N42239-SQ_v1.0	-	CVM N42239
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38577	65.6	-	MMZY01	5	4273	4091	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916219	GCA_001853245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/245/GCA_001853245.1_ASM185324v1	-	01-R1022
Escherichia coli O145:NM str. 2010C-3518	1446594	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.36108	50.5	-	JHFP01	126	5716	5170	4/7/14	2/23/17	Contig	CDC	SAMN02352972	GCA_000615345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/345/GCA_000615345.1_Ec2010C-3518	25103754	2010C-3518
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07599	39.6	-	FIBH01	33	2279	2033	2/10/16	3/15/17	Contig	SC	SAMEA2161974	GCA_900064005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/005/GCA_900064005.1_10678_7_70	-	2690STDY5561783
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.58627	57	-	FWLH01	46	5631	5336	3/29/17	4/3/17	Scaffold	SC	SAMEA4362606	GCA_900173305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/305/GCA_900173305.1_20794_7_170	-	VRCO0253
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.59074	57.4	-	FWLG01	31	5573	5339	3/29/17	4/3/17	Scaffold	SC	SAMEA4362605	GCA_900173315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/315/GCA_900173315.1_20794_7_169	-	VRCO0246
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07632	39.6	-	FIDE01	34	2282	2033	2/10/16	3/13/17	Contig	SC	SAMEA2159369	GCA_900064265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/265/GCA_900064265.1_10702_5_42	-	2690STDY5561836
Escherichia coli O145:NM str. 2010C-3521	1446595	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.34234	50.5	-	JHFO01	99	5676	5149	4/7/14	2/23/17	Contig	CDC	SAMN02352973	GCA_000615385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/385/GCA_000615385.1_Ec2010C-3521	25103754	2010C-3521
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39196	65.6	-	MNAA01	1	4268	4113	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916217	GCA_001853265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/265/GCA_001853265.1_ASM185326v1	-	01-R0685
Salmonella enterica subsp. enterica serovar Montevideo	115981	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.80651	52.2	-	JYZL01	71	4956	4702	12/22/15	3/1/17	Contig	FDA	SAMN02699341	GCA_001480465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/465/GCA_001480465.1_Salmonella_enterica_CVM_N42336-SQ_v1.0	-	CVM N42336
Staphylococcus aureus W55536	1418371	PRJNA227660	227660	Terrabacteria group	Firmicutes	2.91477	32.7	-	JGLJ01	23	3087	2947	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402584	GCA_000606065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/065/GCA_000606065.1_Stap_aure_W55536_V1	-	W55536
Staphylococcus aureus W62344	1418372	PRJNA227661	227661	Terrabacteria group	Firmicutes	2.81058	32.8	-	JGLK01	36	2928	2779	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402585	GCA_000606085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/085/GCA_000606085.1_Stap_aure_W62344_V1	-	W62344
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.01076	52.2	-	JYZN01	126	5177	4919	12/22/15	3/1/17	Contig	FDA	SAMN02699343	GCA_001480485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/485/GCA_001480485.1_Salmonella_enterica_CVM_N42450-SQ_v1.0	-	CVM N42450
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37896	65.6	-	MMZX01	7	4246	4085	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916220	GCA_001853285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/285/GCA_001853285.1_ASM185328v1	-	01-R0165
Escherichia coli O121:H19 str. 2010C-3840	1446562	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.46894	50.3	-	JHFK01	141	5800	5226	4/7/14	2/23/17	Contig	CDC	SAMN02352977	GCA_000615505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/505/GCA_000615505.1_Ec2010C-3840	25103754	2010C-3840
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07749	39.6	-	FIDH01	34	2277	2034	2/10/16	3/13/17	Contig	SC	SAMEA2144900	GCA_900064275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/275/GCA_900064275.1_10702_5_44	-	2690STDY5561710
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.30778	57.5	-	FWLI01	29	5301	5076	3/29/17	4/3/17	Scaffold	SC	SAMEA4362610	GCA_900173325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/325/GCA_900173325.1_20794_7_174	-	VRCO0290
Pseudomonas aeruginosa	287	PRJEB19691	377479	Proteobacteria	Gammaproteobacteria	6.36097	66.5	-	FUYU01	32	6013	5862	3/8/17	3/18/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03097710	GCA_900168095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/168/095/GCA_900168095.1_IMG-taxon_2606217733_annotated_assembly	-	NFHH01
Mycoplasma capricolum subsp. capripneumoniae M1601	927701	PRJNA60247	60247	Terrabacteria group	Tenericutes	1.01671	23.7	chromosome:NZ_CP017125.1/CP017125.1	-	1	914	705	9/16/16	4/5/17	Complete Genome	"Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences"	SAMN02469495	GCA_000192395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/192/395/GCA_000192395.2_ASM19239v2	21994928	M1601
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.58615	57	-	FWLL01	48	5640	5329	3/29/17	4/3/17	Scaffold	SC	SAMEA4362608	GCA_900173335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/335/GCA_900173335.1_20794_7_172	-	VRCO0255
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07635	39.6	-	FIDI01	30	2283	2032	2/10/16	3/13/17	Contig	SC	SAMEA2160852	GCA_900064285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/285/GCA_900064285.1_10702_5_46	-	2690STDY5561722
Escherichia coli O45:H2 str. 2010C-3876	1446743	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.27585	50.5	-	JHFI01	100	5688	5231	4/7/14	2/23/17	Contig	CDC	SAMN02352979	GCA_000615535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/535/GCA_000615535.1_Ec2010C-3876	25103754	2010C-3876
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.397	65.6	-	MMZW01	7	4265	4106	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05916221	GCA_001853295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/295/GCA_001853295.1_ASM185329v1	-	01-R0907
Salmonella enterica subsp. enterica serovar Mbandaka	192954	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.74522	52.1	-	JYZO01	87	4849	4586	12/22/15	3/1/17	Contig	FDA	SAMN02699344	GCA_001480505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/505/GCA_001480505.1_Salmonella_enterica_CVM_N42451-SQ_v1.0	-	CVM N42451
Staphylococcus aureus W62354	1418373	PRJNA227662	227662	Terrabacteria group	Firmicutes	2.88587	32.8	-	JGLL01	35	3024	2859	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402586	GCA_000606105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/105/GCA_000606105.1_Stap_aure_W62354_V1	-	W62354
Staphylococcus aureus F16533	1418374	PRJNA227663	227663	Terrabacteria group	Firmicutes	2.88579	32.7	-	JGLM01	19	3055	2895	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402587	GCA_000606125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/125/GCA_000606125.1_Stap_aure_F16533_V1	-	F16533
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.81919	52	-	JYXV01	155	4949	4653	12/22/15	3/1/17	Contig	FDA	SAMN02699300	GCA_001480535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/535/GCA_001480535.1_Salmonella_enterica_CVM_N38910-SQ_v1.0	-	CVM N38910
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.4022	65.6	-	MMLY01	31	4292	4111	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918534	GCA_001855785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/785/GCA_001855785.1_ASM185578v1	-	I0001464-2
Escherichia coli O156:H25 str. 2011C-3602	1446605	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.18301	50.4	-	JHLP01	87	5597	5113	4/7/14	2/23/17	Contig	CDC	SAMN02353030	GCA_000616285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/285/GCA_000616285.1_Ec2011C-3602	25103754	2011C-3602
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07509	39.6	-	FHXQ01	35	2280	2027	2/10/16	3/13/17	Contig	SC	SAMEA2152124	GCA_900064955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/955/GCA_900064955.1_10678_6_48	-	2690STDY5561905
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.58367	57	-	FWLJ01	49	5630	5327	3/29/17	4/3/17	Scaffold	SC	SAMEA4362607	GCA_900173345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/345/GCA_900173345.1_20794_7_171	-	VRCO0254
Pseudomonas aeruginosa PA38182	1407059	PRJEB4573	236003	Proteobacteria	Gammaproteobacteria	7.58615	64.8	chromosome I:HG530068.1	-	1	7360	7279	1/23/14	2/27/15	Chromosome	BUGS	SAMEA3138907	GCA_000531435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/531/435/GCA_000531435.1_PA38182	-	PA38182
Pseudomonas aeruginosa	287	PRJNA285384	285384	Proteobacteria	Gammaproteobacteria	6.53741	59.6	chromosome:CP014210.1	-	1	-	-	3/2/16	3/2/16	Chromosome	OSMANIA UNIVERSITY	SAMN04445777	GCA_001578415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/415/GCA_001578415.1_ASM157841v1	-	KU
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.30866	57.5	-	FWLN01	34	5304	5080	3/29/17	4/3/17	Scaffold	SC	SAMEA4362611	GCA_900173355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/355/GCA_900173355.1_20794_7_175	-	VRCO0292
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.077	39.6	-	FHZD01	35	2283	2038	2/10/16	3/13/17	Contig	SC	SAMEA2154822	GCA_900064965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/965/GCA_900064965.1_10678_7_18	-	2690STDY5561775
Escherichia coli O157:H7 str. 2011EL-1107	1446623	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.41414	50.4	-	JHLK01	125	5872	5401	4/7/14	2/23/17	Contig	CDC	SAMN02353036	GCA_000616365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/365/GCA_000616365.1_Ec2011EL-1107	25103754	2011EL-1107
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41794	65.6	-	MMLH01	22	4302	4103	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918551	GCA_001855815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/815/GCA_001855815.1_ASM185581v1	-	01-R0612
Salmonella enterica subsp. enterica serovar Brandenburg	149387	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.67031	52.2	-	JYYG01	49	4751	4502	12/22/15	3/1/17	Contig	FDA	SAMN02699310	GCA_001480545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/545/GCA_001480545.1_Salmonella_enterica_CVM_N40367-SQ_v1.0	-	CVM N40367
Staphylococcus aureus F23585	1418375	PRJNA227664	227664	Terrabacteria group	Firmicutes	2.80815	32.8	-	JGLN01	41	2903	2769	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402588	GCA_000606145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/145/GCA_000606145.1_Stap_aure_F23585_V1	-	F23585
Staphylococcus aureus F27233	1418376	PRJNA227665	227665	Terrabacteria group	Firmicutes	2.84001	32.7	-	JGLO01	22	2995	2840	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402589	GCA_000606165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/165/GCA_000606165.1_Stap_aure_F27233_V1	-	F27233
Salmonella enterica subsp. enterica serovar Berta	28142	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.89845	52.1	-	JYYP01	72	5051	4782	12/22/15	3/1/17	Contig	FDA	SAMN02699319	GCA_001480555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/555/GCA_001480555.1_Salmonella_enterica_CVM_N40408-SQ_v1.0	-	CVM N40408
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39737	65.6	-	MMLZ01	30	4282	4099	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918533	GCA_001855875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/875/GCA_001855875.1_ASM185587v1	-	I0001460-0
Escherichia coli O69:H11 str. 07-4281	1446752	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	4.83821	50.8	-	JHLA01	207	5097	4693	4/7/14	2/23/17	Contig	CDC	SAMN02352918	GCA_000616565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/565/GCA_000616565.1_Ec07-4281	25103754	Jul-81
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07696	39.6	-	FIAP01	29	2265	2025	2/10/16	3/13/17	Contig	SC	SAMEA2160594	GCA_900064975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/975/GCA_900064975.1_10678_7_52	-	2690STDY5561680
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.58315	57	-	FWLM01	54	5634	5310	3/29/17	4/10/17	Scaffold	SC	SAMEA4362609	GCA_900173365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/365/GCA_900173365.1_20794_7_173	-	VRCO0257
Pseudomonas aeruginosa C3719	350704	PRJNA16170	16170	Proteobacteria	Gammaproteobacteria	6.2221	66.3	-	AAKV01	1	5626	5221	1/4/06	2/7/14	Scaffold	Broad Institute	SAMN02595210	GCA_000152525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/525/GCA_000152525.1_ASM15252v1	18287045	C3719
Pseudomonas aeruginosa	287	PRJNA264310	264310	Proteobacteria	Gammaproteobacteria	5.74326	65.3	-	JTXG01	501	-	-	12/4/14	12/4/14	Scaffold	AstraZeneca	SAMN03105477	GCA_000794725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/794/725/GCA_000794725.1_AZPAE14699	25367914	AZPAE14699
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.57772	56.9	-	FWLO01	89	5561	5251	3/29/17	4/3/17	Scaffold	SC	SAMEA4362613	GCA_900173375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/375/GCA_900173375.1_20794_7_177	-	VRCO0310
Streptococcus pneumoniae	1313	PRJEB2110	203866	Terrabacteria group	Firmicutes	2.14898	39.7	-	FIVP01	58	2429	2166	2/10/16	3/13/17	Contig	SC	SAMEA971472	GCA_900065115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/115/GCA_900065115.1_4995_8_1	-	C15514
Escherichia coli O118:H16 str. 08-3651	1446548	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.30663	50.4	-	JHKX01	96	5759	5307	4/7/14	2/23/17	Contig	CDC	SAMN02352921	GCA_000616625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/625/GCA_000616625.1_Ec08-3651	25103754	Aug-51
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37497	65.6	-	MMMI01	11	4261	4093	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918524	GCA_001855915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/915/GCA_001855915.1_ASM185591v1	-	I0002918-6
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.90259	52	-	JYZP01	104	5008	4724	12/22/15	3/1/17	Contig	FDA	SAMN02699345	GCA_001480595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/595/GCA_001480595.1_Salmonella_enterica_CVM_N42453-SQ_v1.0	-	CVM N42453
Staphylococcus aureus F29214	1418377	PRJNA227666	227666	Terrabacteria group	Firmicutes	2.90003	32.8	-	JGLP01	63	3024	2870	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402590	GCA_000606185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/185/GCA_000606185.1_Stap_aure_F29214_V1	-	F29214
Staphylococcus aureus F38211	1418380	PRJNA227669	227669	Terrabacteria group	Firmicutes	2.89324	32.7	-	JGLQ01	27	3053	2913	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402593	GCA_000606205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/205/GCA_000606205.1_Stap_aure_F38211_V1	-	F38211
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.87739	52.2	-	JYZS01	60	4971	4745	12/22/15	3/1/17	Contig	FDA	SAMN02699348	GCA_001480605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/605/GCA_001480605.1_Salmonella_enterica_CVM_N42468_v1.0	-	CVM N42468
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3957	65.6	-	MMMK01	10	4283	4113	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918522	GCA_001855945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/945/GCA_001855945.1_ASM185594v1	-	I0004220-5
Escherichia coli O157:H7 str. K5806	1446692	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.40443	50.3	-	JHHZ01	119	5761	5308	4/7/14	2/23/17	Contig	CDC	SAMN02353118	GCA_000616745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/745/GCA_000616745.1_EcK5806	25103754	K5806
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07526	39.6	-	FHXL01	36	2272	2027	2/10/16	3/13/17	Contig	SC	SAMEA2162514	GCA_900065185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/185/GCA_900065185.1_10678_6_42	-	2690STDY5561910
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.75584	57.1	-	FWLK01	51	5762	5417	3/29/17	4/3/17	Scaffold	SC	SAMEA4362612	GCA_900173385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/385/GCA_900173385.1_20794_7_176	-	VRCO0297
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.3164	66.1	-	LBMB01	619	-	-	5/5/15	5/5/15	Scaffold	University of Toronto	SAMN03566230	GCA_000988005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/988/005/GCA_000988005.1_ASM98800v1	-	Pae_CF67.01b
Pseudomonas aeruginosa VRFPA01	1262663	PRJNA183455	183455	Proteobacteria	Gammaproteobacteria	6.99164	65.4	-	AOBK03	81	5974	4921	1/31/13	8/5/14	Contig	"SANKARA NETHRALAYA, VISION RESEARCH FOUNDATION"	SAMN02472097	GCA_000335395.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/335/395/GCA_000335395.3_ASM33539v3	-	VRFPA01
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.58228	57.1	-	FWLQ01	65	5625	5312	3/29/17	4/3/17	Scaffold	SC	SAMEA4362616	GCA_900173395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/395/GCA_900173395.1_20794_7_180	-	VRCO0317
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07619	39.6	-	FHZH01	29	2283	2034	2/10/16	3/12/17	Contig	SC	SAMEA2156333	GCA_900065195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/195/GCA_900065195.1_10678_7_21	-	2690STDY5561830
Escherichia coli O26:H11 str. 05-3646	1446500	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.44699	50.3	-	JHOE01	136	5956	5453	4/7/14	2/23/17	Contig	CDC	SAMN02352886	GCA_000617065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/065/GCA_000617065.1_Ec05-3646	25103754	May-46
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3989	65.6	-	MMMJ01	4	4279	4102	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918523	GCA_001855955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/955/GCA_001855955.1_ASM185595v1	-	I0003905-2
Salmonella enterica subsp. enterica serovar Agona	58095	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.9201	52	-	JYZT01	91	5032	4772	12/22/15	3/1/17	Contig	FDA	SAMN02699349	GCA_001480635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/635/GCA_001480635.1_Salmonella_enterica_CVM_N42469_v1.0	-	CVM N42469
Staphylococcus aureus F48420	1418381	PRJNA227670	227670	Terrabacteria group	Firmicutes	2.92658	32.7	-	JGLR01	21	3114	2954	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402594	GCA_000606225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/225/GCA_000606225.1_Stap_aure_F48420_V1	-	F48420
Staphylococcus aureus F48422	1418382	PRJNA227671	227671	Terrabacteria group	Firmicutes	2.89495	32.7	-	JGLS01	25	3035	2889	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402595	GCA_000606245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/245/GCA_000606245.1_Stap_aure_F48422_V1	-	F48422
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.74873	52.1	-	JYZW01	83	4848	4603	12/22/15	3/1/17	Contig	FDA	SAMN02699352	GCA_001480655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/655/GCA_001480655.1_Salmonella_enterica_CVM_N42477_v1.0	-	CVM N42477
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41117	65.6	-	MMMM01	8	4295	4116	10/25/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05918520	GCA_001855985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/985/GCA_001855985.1_ASM185598v1	-	I0004244-5
Escherichia coli O174:H8 str. 04-3038	1446704	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.63271	50.5	-	JHOC01	107	6059	5591	4/7/14	2/23/17	Contig	CDC	SAMN02352888	GCA_000617085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/085/GCA_000617085.1_Ec04-3038	25103754	Apr-38
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07734	39.6	-	FIAN01	33	2280	2029	2/10/16	3/15/17	Contig	SC	SAMEA2151113	GCA_900065205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/205/GCA_900065205.1_10678_7_50	-	2690STDY5561885
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.57429	57.1	-	FWLT01	64	5634	5313	3/29/17	4/3/17	Scaffold	SC	SAMEA4362615	GCA_900173405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/405/GCA_900173405.1_20794_7_179	-	VRCO0316
Pseudomonas aeruginosa VRFPA02	1315978	PRJNA196397	196397	Proteobacteria	Gammaproteobacteria	6.47492	66	-	AQHM01	186	6084	6021	5/16/13	1/8/14	Contig	"SANKARA NETHRALAYA, VISION RESEARCH FOUNDATION"	SAMN02472102	GCA_000399805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/399/805/GCA_000399805.1_Pseudoaeru02	23833134	VRFPA02
Pseudomonas aeruginosa str. J 1532	1333545	PRJNA200798	200798	Proteobacteria	Gammaproteobacteria	6.27044	66.2	-	ASQZ01	2544	-	-	6/19/13	6/16/14	Contig	University of Strathclyde	SAMN02142562	GCA_000412475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/475/GCA_000412475.1_ASM41247v1	24167005	J 1532
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.59471	56.9	-	FWLP01	72	5584	5281	3/29/17	4/3/17	Scaffold	SC	SAMEA4362614	GCA_900173415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/415/GCA_900173415.1_20794_7_178	-	VRCO0312
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07656	39.6	-	FIAO01	35	2280	2035	2/10/16	3/13/17	Contig	SC	SAMEA2157918	GCA_900065215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/215/GCA_900065215.1_10678_7_51	-	2690STDY5561770
Escherichia coli O174:H21 str. 03-3269	1446703	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.02662	50.8	-	JHNW01	61	5299	4972	4/7/14	2/23/17	Contig	CDC	SAMN02352896	GCA_000617205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/205/GCA_000617205.1_Ec03-3269	25103754	Mar-69
Mycobacterium tuberculosis	1773	PRJNA349997	349997	Terrabacteria group	Actinobacteria	4.40438	65.6	-	MNBY01	3	4272	4071	11/7/16	3/14/17	Contig	Michigan State University	SAMN05933699	GCA_001870245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/245/GCA_001870245.1_ASM187024v1	-	TB284
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.22815	51.9	-	JYZZ01	81	5407	5149	12/22/15	3/1/17	Contig	FDA	SAMN02699355	GCA_001480665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/665/GCA_001480665.1_Salmonella_enterica_CVM_N42482_v1.0	-	CVM N42482
Staphylococcus aureus F48603	1418383	PRJNA227672	227672	Terrabacteria group	Firmicutes	2.94516	32.7	-	JGLT01	29	3138	2978	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402596	GCA_000606265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/265/GCA_000606265.1_Stap_aure_F48603_V1	-	F48603
Staphylococcus aureus F56969	1418386	PRJNA227675	227675	Terrabacteria group	Firmicutes	2.87233	32.8	-	JGLU01	46	3041	2890	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402599	GCA_000606285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/285/GCA_000606285.1_Stap_aure_F56969_V1	-	F56969
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.99292	52	-	JZAC01	94	5100	4794	12/22/15	3/1/17	Contig	FDA	SAMN02699358	GCA_001480695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/695/GCA_001480695.1_Salmonella_enterica_CVM_N42500_v1.0	-	CVM N42500
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38752	65.6	-	MLFI01	3	4263	4100	12/6/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05830710	GCA_001889665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/665/GCA_001889665.1_ASM188966v1	-	01-R1309
Escherichia coli O119:H4 str. 03-3458	1446551	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.27965	50.6	-	JHNV01	83	5656	5240	4/7/14	2/23/17	Contig	CDC	SAMN02352897	GCA_000617225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/225/GCA_000617225.1_Ec03-3458	25103754	Mar-58
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07325	39.6	-	FIEQ01	30	2272	2024	2/10/16	3/13/17	Contig	SC	SAMEA2151371	GCA_900065225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/225/GCA_900065225.1_10702_5_8	-	2690STDY5561925
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.57849	57.1	-	FWLR01	70	5627	5296	3/29/17	4/3/17	Scaffold	SC	SAMEA4362617	GCA_900173425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/425/GCA_900173425.1_20794_7_181	-	VRCO0318
Pseudomonas aeruginosa str. J 1385	1333544	PRJNA200798	200798	Proteobacteria	Gammaproteobacteria	6.43226	66.1	-	ASRB01	2516	-	-	6/19/13	6/16/14	Contig	University of Strathclyde	SAMN02142561	GCA_000412515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/515/GCA_000412515.1_J_1385	24167005	J 1385
Pseudomonas aeruginosa str. C 1433	1333543	PRJNA200798	200798	Proteobacteria	Gammaproteobacteria	6.20162	66.3	-	ASRC01	2020	-	-	6/19/13	6/16/14	Contig	University of Strathclyde	SAMN02142560	GCA_000412535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/535/GCA_000412535.1_C_1433	24167005	C 1433
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.57779	57.1	-	FWLS01	64	5615	5300	3/29/17	4/3/17	Scaffold	SC	SAMEA4362618	GCA_900173435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/435/GCA_900173435.1_20794_7_182	-	VRCO0319
Streptococcus pneumoniae	1313	PRJEB2098	203734	Terrabacteria group	Firmicutes	2.10111	39.6	-	FIVB01	38	2342	2089	2/10/16	3/13/17	Contig	SC	SAMEA807276	GCA_900065285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/285/GCA_900065285.1_4948_3_8	-	B15567
Escherichia coli O69:H11 str. 06-3325	1446750	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.51397	50.3	-	JHNP01	130	6094	5541	4/7/14	2/23/17	Contig	CDC	SAMN02352903	GCA_000617325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/325/GCA_000617325.1_Ec06-3325	25103754	Jun-25
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3691	65.6	-	MLFJ01	2	4254	4090	12/6/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05830711	GCA_001889675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/675/GCA_001889675.1_ASM188967v1	-	01-R1141
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.99039	51.9	-	JZAF01	126	5117	4775	12/22/15	3/1/17	Contig	FDA	SAMN02699361	GCA_001480715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/715/GCA_001480715.1_Salmonella_enterica_CVM_N42508_v1.0	-	CVM N42508
Staphylococcus aureus F76253	1418387	PRJNA227676	227676	Terrabacteria group	Firmicutes	2.85267	32.6	-	JGLV01	50	2998	2875	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402600	GCA_000606305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/305/GCA_000606305.1_Stap_aure_F76253_V1	-	F76253
Staphylococcus aureus F92121	1418389	PRJNA227678	227678	Terrabacteria group	Firmicutes	2.88964	32.7	-	JGLW01	18	3059	2892	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402602	GCA_000606325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/325/GCA_000606325.1_Stap_aure_F92121_V1	-	F92121
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.97764	52.1	-	JZAG01	68	5166	4832	12/22/15	3/1/17	Contig	FDA	SAMN02699362	GCA_001480725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/725/GCA_001480725.1_Salmonella_enterica_CVM_N42512_v1.0	-	CVM N42512
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38474	65.6	-	MLFH01	9	4260	4096	12/6/16	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN05830709	GCA_001889725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/889/725/GCA_001889725.1_ASM188972v1	-	02-R1447
Escherichia coli O55:H7 str. 06-3555	1446745	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	4.2795	50.6	-	JHNL01	170	4416	4069	4/7/14	2/23/17	Contig	CDC	SAMN02352907	GCA_000617385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/385/GCA_000617385.1_Ec06-3555	25103754	Jun-55
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07605	39.6	-	FHXJ01	32	2273	2029	2/10/16	3/13/17	Contig	SC	SAMEA1966803	GCA_900065365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/365/GCA_900065365.1_10678_6_4	-	2690STDY5561670
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.57458	57.1	-	FWLY01	67	5613	5295	3/29/17	4/3/17	Scaffold	SC	SAMEA4362619	GCA_900173445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/445/GCA_900173445.1_20794_7_183	-	VRCO0320
Pseudomonas aeruginosa PGPR2	1328315	PRJNA200546	200546	Proteobacteria	Gammaproteobacteria	6.77243	66	-	ASQO01	198	6244	5520	6/20/13	9/9/14	Contig	Madurai Kamaraj University	SAMN02470289	GCA_000412735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/412/735/GCA_000412735.1_pagenome	25184130	PGPR2
Pseudomonas aeruginosa PAO1-CipR	1331669	PRJNA202063	202063	Proteobacteria	Gammaproteobacteria	5.79812	66.1	-	ASJG01	1677	-	-	6/26/13	1/8/14	Contig	Boise State University	SAMN02469402	GCA_000414255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/255/GCA_000414255.1_Resistant_454AllContigs	23808957	PAO1-CipR
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.58005	57.1	-	FWLX01	73	5636	5298	3/29/17	4/3/17	Scaffold	SC	SAMEA4362620	GCA_900173455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/455/GCA_900173455.1_20794_7_184	-	VRCO0321
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07605	39.6	-	FIEP01	35	2278	2030	2/10/16	3/12/17	Contig	SC	SAMEA1968001	GCA_900065375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/375/GCA_900065375.1_10702_5_81	-	2690STDY5561724
Escherichia coli O91:H14 str. 06-3691	1446763	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	4.87642	50.8	-	JHNJ01	108	5143	4799	4/7/14	2/23/17	Contig	CDC	SAMN02352909	GCA_000617425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/425/GCA_000617425.1_Ec06-3691	25103754	Jun-91
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38174	65.6	-	MQAM01	3	4256	4099	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010124	GCA_001942645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/645/GCA_001942645.1_ASM194264v1	-	I0005430-9
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.02392	52	-	JZAI01	93	5138	4832	12/22/15	3/1/17	Contig	FDA	SAMN02699364	GCA_001480755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/755/GCA_001480755.1_Salmonella_enterica_CVM_N42521-SQ_v1.0	-	CVM N42521
Staphylococcus aureus H20321	1418392	PRJNA227681	227681	Terrabacteria group	Firmicutes	2.85453	32.8	-	JGLX01	43	2992	2839	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402605	GCA_000606345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/345/GCA_000606345.1_Stap_aure_H20321_V1	-	H20321
Staphylococcus aureus H20322	1418393	PRJNA227682	227682	Terrabacteria group	Firmicutes	2.85255	32.8	-	JGLY01	47	3004	2834	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402606	GCA_000606365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/365/GCA_000606365.1_Stap_aure_H20322_V1	-	H20322
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.06284	52	-	JYWS01	117	5227	4949	12/22/15	3/1/17	Contig	FDA	SAMN02699271	GCA_001480775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/775/GCA_001480775.1_Salmonella_enterica_CVM_N37941-SQ_v1.0	-	CVM N37941
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39618	65.6	-	MQAP01	15	4268	4110	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010127	GCA_001942715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/715/GCA_001942715.1_ASM194271v1	-	I0003860-9
Escherichia coli O165:H25 str. 2010C-4874	1446700	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.12338	50.5	-	JHMM01	118	5549	4889	4/7/14	2/23/17	Contig	CDC	SAMN02353005	GCA_000617585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/585/GCA_000617585.1_Ec2010C-4874	25103754	2010C-4874
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.00778	39.7	-	FHTY01	47	2195	1966	2/10/16	3/13/17	Contig	SC	SAMEA2796421	GCA_900065605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/605/GCA_900065605.1_14673_1_13	-	2245STDY5982442
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.57845	57.1	-	FWLU01	60	5607	5314	3/29/17	4/3/17	Scaffold	SC	SAMEA4362622	GCA_900173465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/465/GCA_900173465.1_20794_7_186	-	VRCO0323
Pseudomonas aeruginosa PAO1	208964	PRJNA201024	201024	Proteobacteria	Gammaproteobacteria	6.05818	66.4	-	ASJY01	843	-	-	6/26/13	1/8/14	Contig	Boise State University	SAMN02469398	GCA_000414275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/414/275/GCA_000414275.1_Wild_Type_454AllContigs	23808957	PAO1
Pseudomonas aeruginosa VRFPA03	1350465	PRJNA209587	209587	Proteobacteria	Gammaproteobacteria	7.03773	65.2	-	ATNK01	150	6819	5973	8/21/13	12/10/15	Contig	"SANKARA NETHRALAYA, VISION RESEARCH FOUNDATION"	SAMN02472104	GCA_000467675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/675/GCA_000467675.1_PseVRFPA03	-	VRFPA03
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.57783	57.1	-	FWLV01	71	5629	5310	3/29/17	4/3/17	Scaffold	SC	SAMEA4362621	GCA_900173475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/475/GCA_900173475.1_20794_7_185	-	VRCO0322
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07535	39.6	-	FHXB01	25	2278	2030	2/10/16	3/13/17	Contig	SC	SAMEA2161546	GCA_900065645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/645/GCA_900065645.1_10678_6_32	-	2690STDY5561867
Escherichia coli O103:H2 str. 2010C-4433	1446504	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.35583	50.5	-	JHNC01	94	5796	5341	4/7/14	2/23/17	Contig	CDC	SAMN02352989	GCA_000617685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/685/GCA_000617685.1_Ec2010C-4433	25103754	2010C-4433
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38138	65.6	-	MQAS01	2	4250	4083	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010130	GCA_001942735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/735/GCA_001942735.1_ASM194273v1	-	I0003078-8
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.05989	52.1	-	JYWU01	93	5203	4948	12/22/15	3/1/17	Contig	FDA	SAMN02699273	GCA_001480795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/795/GCA_001480795.1_Salmonella_enterica_CVM_N38229-SQ_v1.0	-	CVM N38229
Staphylococcus aureus H32175	1418394	PRJNA227683	227683	Terrabacteria group	Firmicutes	2.93315	32.7	-	JGLZ01	20	3123	2957	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402607	GCA_000606385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/385/GCA_000606385.1_Stap_aure_H32175_V1	-	H32175
Staphylococcus aureus H50387	1418395	PRJNA227684	227684	Terrabacteria group	Firmicutes	2.92679	32.8	-	JGMA01	12	3106	2942	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402608	GCA_000606405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/405/GCA_000606405.1_Stap_aure_H50387_V1	-	H50387
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.90271	52.1	-	JYXH01	82	5040	4813	12/22/15	3/1/17	Contig	FDA	SAMN02699286	GCA_001480805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/805/GCA_001480805.1_Salmonella_enterica_CVM_N38868-SQ_v1.0	-	CVM N38868
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37821	65.6	-	MQAT01	5	4257	4101	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010131	GCA_001942785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/785/GCA_001942785.1_ASM194278v1	-	I0003529-0
Escherichia coli O103:H25 str. 2010C-4529	1446506	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.26887	50.4	-	JHNB01	103	5733	5230	4/7/14	2/23/17	Contig	CDC	SAMN02352990	GCA_000617745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/745/GCA_000617745.1_Ec2010C-4529	25103754	2010C-4529
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07469	39.6	-	FHXC01	34	2282	2029	2/10/16	3/13/17	Contig	SC	SAMEA2151236	GCA_900065655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/655/GCA_900065655.1_10678_6_33	-	2690STDY5561896
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.58781	57.1	-	FWMA01	97	5692	5330	3/29/17	4/3/17	Scaffold	SC	SAMEA4362623	GCA_900173485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/485/GCA_900173485.1_20794_7_187	-	VRCO0329
Pseudomonas aeruginosa VRFPA05	1408193	PRJNA222642	222642	Proteobacteria	Gammaproteobacteria	7.05036	65.8	-	AXZJ01	170	6667	6155	11/8/13	12/10/15	Contig	"SANKARA NETHRALAYA, VISION RESEARCH FOUNDATION"	SAMN02472101	GCA_000496325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/496/325/GCA_000496325.1_MDRPA05	-	VRFPA05
Pseudomonas aeruginosa PFK10	1408208	PRJNA222566	222566	Proteobacteria	Gammaproteobacteria	6.04191	66.8	-	AZBM01	206	-	-	12/10/13	2/28/14	Contig	Saurashtra University	SAMN02469587	GCA_000505805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/805/GCA_000505805.1_P.aer_PFK10	24503984	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.58659	57.1	-	FWLW01	90	5655	5287	3/29/17	4/3/17	Scaffold	SC	SAMEA4362624	GCA_900173495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/495/GCA_900173495.1_20794_7_188	-	VRCO0330
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07561	39.6	-	FIAB01	34	2273	2026	2/10/16	3/13/17	Contig	SC	SAMEA2153219	GCA_900065665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/665/GCA_900065665.1_10678_7_4	-	2690STDY5561746
Escherichia coli O177:NM str. 2010C-4558	1446706	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.07153	50.4	-	JHMZ01	116	5505	4916	4/7/14	2/23/17	Contig	CDC	SAMN02352992	GCA_000617785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/785/GCA_000617785.1_Ec2010C-4558	25103754	2010C-4558
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39109	65.6	-	MQAU01	10	4263	4099	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010132	GCA_001942795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/795/GCA_001942795.1_ASM194279v1	-	I0004133-0
Salmonella enterica subsp. enterica serovar Agona	58095	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.95097	52.1	-	JYXL01	69	5044	4798	12/22/15	3/1/17	Contig	FDA	SAMN02699290	GCA_001480835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/835/GCA_001480835.1_Salmonella_enterica_CVM_N38874-SQ_v1.0	-	CVM N38874
Staphylococcus aureus H50403	1418396	PRJNA227685	227685	Terrabacteria group	Firmicutes	2.85143	32.7	-	JGMB01	22	3002	2831	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402609	GCA_000606425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/425/GCA_000606425.1_Stap_aure_H50403_V1	-	H50403
Staphylococcus aureus H59325	1418398	PRJNA227687	227687	Terrabacteria group	Firmicutes	2.89699	32.7	-	JGMC01	20	3062	2893	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402611	GCA_000606445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/445/GCA_000606445.1_Stap_aure_H59325_V1	-	H59325
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.88912	52.2	-	JYXW01	81	5021	4776	12/22/15	3/1/17	Contig	FDA	SAMN02699301	GCA_001480855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/855/GCA_001480855.1_Salmonella_enterica_CVM_N38914-SQ_v1.0	-	CVM N38914
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39438	65.6	-	MQAX01	4	4260	4103	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010136	GCA_001942805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/805/GCA_001942805.1_ASM194280v1	-	I0004003-5
Escherichia coli O157:H7 str. K4405	1446680	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.3928	50.2	-	JHIN01	107	5800	5357	4/8/14	2/23/17	Contig	CDC	SAMN02353104	GCA_000617965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/965/GCA_000617965.1_EcK4405	25103754	K4405
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.0749	39.6	-	FIBO01	31	2274	2028	2/10/16	3/13/17	Contig	SC	SAMEA2154677	GCA_900065675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/675/GCA_900065675.1_10678_7_78	-	2690STDY5561703
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.47866	57.2	-	FWLZ01	45	5552	5278	3/29/17	4/3/17	Scaffold	SC	SAMEA4370513	GCA_900173505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/505/GCA_900173505.1_20794_7_96	-	VRES0977
Pseudomonas aeruginosa PK6	1408207	PRJNA222564	222564	Proteobacteria	Gammaproteobacteria	6.04565	66.9	-	AZBN01	187	-	-	12/10/13	2/28/14	Contig	Saurashtra University	SAMN02469585	GCA_000505825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/825/GCA_000505825.1_P.aer_PK6	24503980	PK6
Pseudomonas aeruginosa JD303	1403027	PRJNA198782	198782	Proteobacteria	Gammaproteobacteria	6.33765	66.5	-	AWYU01	2002	-	-	12/11/13	12/27/13	Contig	University of Ottawa	SAMN02360632	GCA_000505885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/885/GCA_000505885.1_JD303.contigs	24324153	JD303
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.47603	57.2	-	FWMB01	38	5549	5276	3/29/17	4/3/17	Scaffold	SC	SAMEA4370515	GCA_900173525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/525/GCA_900173525.1_20794_7_98	-	VRES0980
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.0762	39.6	-	FIEJ01	38	2271	2028	2/10/16	3/13/17	Contig	SC	SAMEA2156104	GCA_900065685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/685/GCA_900065685.1_10702_5_77	-	2690STDY5561835
Escherichia coli O157:H7 str. K1420	1446663	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.46901	50.2	-	JHJF01	91	5897	5415	4/8/14	2/23/17	Contig	CDC	SAMN02353086	GCA_000618025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/025/GCA_000618025.1_EcK1420	25103754	K1420
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38405	65.6	-	MQAW01	16	4263	4088	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010134	GCA_001942815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/815/GCA_001942815.1_ASM194281v1	-	I0003179-4
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.11581	51.7	-	JYYD01	150	5200	4864	12/22/15	3/1/17	Contig	FDA	SAMN02699308	GCA_001480865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/865/GCA_001480865.1_Salmonella_enterica_CVM_N39863-SQ_v1.0	-	CVM N39863
Staphylococcus aureus H64570	1418399	PRJNA227688	227688	Terrabacteria group	Firmicutes	2.86876	32.7	-	JGMD01	15	3029	2877	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402612	GCA_000606465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/465/GCA_000606465.1_Stap_aure_H64570_V1	-	H64570
Staphylococcus aureus H83025	1418400	PRJNA227689	227689	Terrabacteria group	Firmicutes	2.8933	32.7	-	JGME01	48	3021	2882	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402613	GCA_000606485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/485/GCA_000606485.1_Stap_aure_H83025_V1	-	H83025
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.98302	52	-	JYYE01	96	5190	4916	12/22/15	3/1/17	Contig	FDA	SAMN02699309	GCA_001480895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/895/GCA_001480895.1_Salmonella_enterica_CVM_N39866-SQ_v1.0	-	CVM N39866
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40415	65.6	-	MQBD01	4	4273	4120	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010142	GCA_001942865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/865/GCA_001942865.1_ASM194286v1	-	I0004064-7
Escherichia coli O111:H8 str. F6627	1446498	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.13724	50.3	-	JHJS01	95	5582	5081	4/8/14	2/23/17	Contig	CDC	SAMN02353073	GCA_000618125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/125/GCA_000618125.1_EcF6627	25103754	F6627
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07656	39.6	-	FIEX01	30	2257	2026	2/10/16	3/12/17	Contig	SC	SAMEA2148396	GCA_900065695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/695/GCA_900065695.1_10702_5_88	-	2690STDY5561671
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.03966	58.2	-	FWMD01	13	4991	4757	3/29/17	4/3/17	Scaffold	SC	SAMEA4362629	GCA_900173535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/535/GCA_900173535.1_20925_2_100	-	VRCO0337
Pseudomonas aeruginosa JD304	1403028	PRJNA198782	198782	Proteobacteria	Gammaproteobacteria	6.41929	66.5	-	AWYT01	2058	-	-	12/11/13	12/27/13	Contig	University of Ottawa	SAMN02360633	GCA_000505905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/905/GCA_000505905.1_JD304.contigs	24324153	JD304
Pseudomonas aeruginosa JD310	1403030	PRJNA198782	198782	Proteobacteria	Gammaproteobacteria	6.40317	66.5	-	AWYR01	2062	-	-	12/11/13	12/27/13	Contig	University of Ottawa	SAMN02360635	GCA_000505925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/925/GCA_000505925.1_JD310.contigs	24324153	JD310
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.47511	57.2	-	FWMC01	41	5540	5277	3/29/17	4/3/17	Scaffold	SC	SAMEA4370516	GCA_900173545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/545/GCA_900173545.1_20794_7_99	-	VRES0981
Streptococcus pneumoniae	1313	PRJEB14217	369056	Terrabacteria group	Firmicutes	2.03686	39.6	-	FLMI01	58	2204	2012	1/27/17	3/15/17	Contig	CEBITEC	SAMEA4020771	GCA_900088715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/715/GCA_900088715.1_246	-	-
Escherichia coli O157:H7 str. K1796	1446667	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.30136	50.3	-	JHJA01	74	5681	5277	4/8/14	2/23/17	Contig	CDC	SAMN02353091	GCA_000618325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/325/GCA_000618325.1_EcK1796	25103754	K1796
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39054	65.6	-	MQBA01	4	4262	4097	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010139	GCA_001942875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/875/GCA_001942875.1_ASM194287v1	-	I0005235-2
Salmonella enterica	28901	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.93953	51.8	-	JYYF01	147	5076	4783	12/22/15	3/1/17	Contig	FDA	SAMN02950159	GCA_001480915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/915/GCA_001480915.1_Salmonella_enterica_CVM_N40366-SQ_v1.0	-	CVM N40366
Staphylococcus aureus H89939	1418401	PRJNA227690	227690	Terrabacteria group	Firmicutes	2.81257	32.8	-	JGMF01	33	2957	2771	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402614	GCA_000606505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/505/GCA_000606505.1_Stap_aure_H89939_V1	-	H89939
Staphylococcus aureus H89941	1418402	PRJNA227691	227691	Terrabacteria group	Firmicutes	2.81369	32.8	-	JGMG01	26	2947	2764	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402615	GCA_000606525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/525/GCA_000606525.1_Stap_aure_H89941_V1	-	H89941
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.11708	51.7	-	JYYO01	139	5224	4904	12/22/15	3/1/17	Contig	FDA	SAMN02699318	GCA_001480925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/925/GCA_001480925.1_Salmonella_enterica_CVM_N40395-SQ_v1.0	-	CVM N40395
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37127	65.6	-	MQBB01	4	4257	4089	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010140	GCA_001942885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/885/GCA_001942885.1_ASM194288v1	-	I0005713-8
Escherichia coli O157:H7 str. K1845	1446668	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.28682	50.5	-	JHIZ01	110	5639	5223	4/8/14	2/23/17	Contig	CDC	SAMN02353092	GCA_000618345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/345/GCA_000618345.1_EcK1845	25103754	K1845
Streptococcus pneumoniae	1313	PRJEB14240	359438	Terrabacteria group	Firmicutes	2.02883	39.6	-	FLUU01	55	2196	2004	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4021833	GCA_900088725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/725/GCA_900088725.1_893	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.03992	58.2	-	FWMI01	15	4989	4755	3/29/17	4/3/17	Scaffold	SC	SAMEA4362630	GCA_900173555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/555/GCA_900173555.1_20925_2_101	-	VRCO0338
Pseudomonas aeruginosa JD312	1403031	PRJNA198782	198782	Proteobacteria	Gammaproteobacteria	6.28375	66.6	-	AWYQ01	2017	-	-	12/11/13	12/27/13	Contig	University of Ottawa	SAMN02360636	GCA_000505945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/945/GCA_000505945.1_JD312.contigs	24324153	JD312
Pseudomonas aeruginosa JD314	1403033	PRJNA198782	198782	Proteobacteria	Gammaproteobacteria	6.21032	66.7	-	AWYO01	2323	-	-	12/11/13	12/27/13	Contig	University of Ottawa	SAMN02360638	GCA_000505965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/965/GCA_000505965.1_JD314.contigs	24324153	JD314
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.75424	57.1	-	FWMH01	53	5760	5417	3/29/17	4/3/17	Scaffold	SC	SAMEA4362631	GCA_900173565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/565/GCA_900173565.1_20925_2_102	-	VRCO0299
Streptococcus pneumoniae	1313	PRJEB14246	359436	Terrabacteria group	Firmicutes	2.07293	39.5	-	FLMH01	70	2242	2047	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4021838	GCA_900088745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/745/GCA_900088745.1_1541	-	-
Escherichia coli O157:H7 str. K1793	1446665	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.1671	50.5	-	JHJC01	102	5502	5107	4/8/14	2/23/17	Contig	CDC	SAMN02353089	GCA_000618365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/365/GCA_000618365.1_EcK1793	25103754	K1793
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38183	65.6	-	MQBG01	13	4254	4094	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010145	GCA_001942945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/945/GCA_001942945.1_ASM194294v1	-	I0001451-9
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.97429	52.1	-	JYYQ01	159	5115	4849	12/22/15	3/1/17	Contig	FDA	SAMN02699320	GCA_001480955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/955/GCA_001480955.1_Salmonella_enterica_CVM_N40413-SQ_v1.0	-	CVM N40413
Staphylococcus aureus M13559	1418403	PRJNA227692	227692	Terrabacteria group	Firmicutes	2.88063	32.8	-	JGMH01	53	3044	2882	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402616	GCA_000606545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/545/GCA_000606545.1_Stap_aure_M13559_V1	-	M13559
Staphylococcus aureus M17299	1418404	PRJNA227693	227693	Terrabacteria group	Firmicutes	2.84751	32.8	-	JGMI01	51	2972	2813	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402617	GCA_000606565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/565/GCA_000606565.1_Stap_aure_M17299_V1	-	M17299
"Salmonella enterica subsp. enterica serovar 4,[5],12:i:-"	440524	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.86559	52.2	-	JYYU01	101	5008	4772	12/22/15	5/30/17	Contig	FDA	SAMN02699324	GCA_001480975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/975/GCA_001480975.1_Salmonella_enterica_CVM_N40939-SQ_v1.0	-	CVM N40939
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39272	65.6	-	MQBH01	18	4265	4102	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010146	GCA_001942955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/955/GCA_001942955.1_ASM194295v1	-	M0004498-3
Escherichia coli O157:H7 str. K1795	1446666	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.22303	50.5	-	JHJB01	96	5570	5153	4/8/14	2/23/17	Contig	CDC	SAMN02353090	GCA_000618385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/385/GCA_000618385.1_EcK1795	25103754	K1795
Streptococcus pneumoniae	1313	PRJEB14234	359441	Terrabacteria group	Firmicutes	2.03921	39.6	-	FLMJ01	61	2199	2013	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4021715	GCA_900088755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/755/GCA_900088755.1_376	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.35087	57.5	-	FWME01	22	5313	5099	3/29/17	4/3/17	Scaffold	SC	SAMEA4362633	GCA_900173575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/575/GCA_900173575.1_20925_2_104	-	VRCO0408
Pseudomonas aeruginosa JD318	1403037	PRJNA198782	198782	Proteobacteria	Gammaproteobacteria	6.21183	66.5	-	AWYK01	2028	-	-	12/11/13	12/27/13	Contig	University of Ottawa	SAMN02360642	GCA_000506005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/005/GCA_000506005.1_JD318.contigs	24324153	JD318
Pseudomonas aeruginosa JD306	1403029	PRJNA198782	198782	Proteobacteria	Gammaproteobacteria	6.61354	66.4	-	AWYS01	2797	-	-	12/11/13	12/27/13	Contig	University of Ottawa	SAMN02360634	GCA_000506085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/085/GCA_000506085.1_JD306.contigs	24324153	JD306
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.48451	57.1	-	FWMM01	30	5544	5247	3/29/17	4/3/17	Scaffold	SC	SAMEA4362632	GCA_900173585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/585/GCA_900173585.1_20925_2_103	-	VRCO0407
Streptococcus pneumoniae	1313	PRJEB14237	359439	Terrabacteria group	Firmicutes	2.04054	39.6	-	FLMK01	63	2216	2017	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4021716	GCA_900088765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/765/GCA_900088765.1_13514	-	-
Escherichia coli O157:H7 str. K1792	1446664	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.16175	50.6	-	JHJD01	142	5552	5112	4/8/14	2/23/17	Contig	CDC	SAMN02353088	GCA_000618425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/425/GCA_000618425.1_EcK1792	25103754	K1792
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34865	65.6	-	MQBJ01	13	4234	4068	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010148	GCA_001942965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/965/GCA_001942965.1_ASM194296v1	-	I0002269-4
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.87109	52.1	-	JYZC01	72	5002	4780	12/22/15	3/1/17	Contig	FDA	SAMN02699332	GCA_001480985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/480/985/GCA_001480985.1_Salmonella_enterica_CVM_N41906-R_v1.0	-	CVM N41906
Staphylococcus aureus M17301	1418405	PRJNA227694	227694	Terrabacteria group	Firmicutes	2.83163	32.8	-	JGMJ01	49	2950	2814	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402618	GCA_000606585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/585/GCA_000606585.1_Stap_aure_M17301_V1	-	M17301
Staphylococcus aureus M25139	1418407	PRJNA227696	227696	Terrabacteria group	Firmicutes	2.81344	32.7	-	JGML01	39	2942	2790	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402620	GCA_000606625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/625/GCA_000606625.1_Stap_aure_M25139_V1	-	M25139
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.89465	52.1	-	JYZE01	72	4949	4702	12/22/15	3/1/17	Contig	FDA	SAMN02699334	GCA_001481015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/015/GCA_001481015.1_Salmonella_enterica_CVM_N41913-SQ_v1.0	-	CVM N41913
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38813	65.6	-	MQBK01	14	4261	4089	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010149	GCA_001942975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/975/GCA_001942975.1_ASM194297v1	-	I0001945-0
Escherichia coli O157:H7 str. K1921	1446669	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.27996	50.4	-	JHIY01	124	5635	5168	4/8/14	2/23/17	Contig	CDC	SAMN02353093	GCA_000618445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/445/GCA_000618445.1_EcK1921	25103754	K1921
Streptococcus pneumoniae	1313	PRJEB14239	359442	Terrabacteria group	Firmicutes	2.03579	39.6	-	FLML01	63	2193	2009	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4021824	GCA_900088775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/775/GCA_900088775.1_762	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.51803	57.2	-	FWMF01	43	5487	5235	3/29/17	4/3/17	Scaffold	SC	SAMEA4362635	GCA_900173595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/595/GCA_900173595.1_20925_2_106	-	VRCO0410
Pseudomonas aeruginosa JD313	1403032	PRJNA198782	198782	Proteobacteria	Gammaproteobacteria	6.32791	66.5	-	AWYP01	2296	-	-	12/11/13	12/27/13	Contig	University of Ottawa	SAMN02360637	GCA_000506105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/105/GCA_000506105.1_JD313.contigs	24324153	JD313
Pseudomonas aeruginosa JD317	1403036	PRJNA198782	198782	Proteobacteria	Gammaproteobacteria	6.49371	66.5	-	AWYL01	2043	-	-	12/11/13	12/27/13	Contig	University of Ottawa	SAMN02360641	GCA_000506145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/145/GCA_000506145.1_JD317.contigs	24324153	JD317
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.52077	57.2	-	FWMG01	35	5500	5241	3/29/17	4/3/17	Scaffold	SC	SAMEA4362636	GCA_900173605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/605/GCA_900173605.1_20925_2_107	-	VRCO0411
Streptococcus pneumoniae	1313	PRJEB14238	359440	Terrabacteria group	Firmicutes	2.13971	39.5	-	FLUW01	68	2325	2136	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4021823	GCA_900088785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/785/GCA_900088785.1_13827	-	-
Escherichia coli O157:H7 str. K1927	1446670	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.31377	50.3	-	JHIX01	120	5674	5229	4/8/14	2/23/17	Contig	CDC	SAMN02353094	GCA_000618465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/465/GCA_000618465.1_EcK1927	25103754	K1927
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40516	65.6	-	MQBP01	11	4287	4102	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010154	GCA_001943025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/025/GCA_001943025.1_ASM194302v1	-	I0003060-6
Salmonella enterica subsp. enterica serovar Senftenberg	28150	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.99873	51.9	-	JYZG01	104	5126	4858	12/22/15	3/1/17	Contig	FDA	SAMN02699336	GCA_001481035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/035/GCA_001481035.1_Salmonella_enterica_CVM_N42232_v1.0	-	CVM N42232
Staphylococcus aureus M64056	1418408	PRJNA227697	227697	Terrabacteria group	Firmicutes	2.77955	32.8	-	JGMM01	53	2898	2702	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402621	GCA_000606645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/645/GCA_000606645.1_Stap_aure_M64056_V1	-	M64056
Staphylococcus aureus M66410	1418410	PRJNA227699	227699	Terrabacteria group	Firmicutes	2.8939	32.8	-	JGMN01	44	3027	2888	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402623	GCA_000606665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/665/GCA_000606665.1_Stap_aure_M66410_V1	-	M66410
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.87532	52.1	-	JYZQ01	70	5008	4762	12/22/15	3/1/17	Contig	FDA	SAMN02699346	GCA_001481045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/045/GCA_001481045.1_Salmonella_enterica_CVM_N42458_v1.0	-	CVM N42458
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3936	65.6	-	MQBQ01	11	4282	4094	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010155	GCA_001943055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/055/GCA_001943055.1_ASM194305v1	-	I0000137-5
Escherichia coli O157:H7 str. K2188	1446671	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.29895	50.4	-	JHIW01	116	5696	5265	4/8/14	2/23/17	Contig	CDC	SAMN02353095	GCA_000618485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/485/GCA_000618485.1_EcK2188	25103754	K2188
Streptococcus pneumoniae	1313	PRJEB14248	359434	Terrabacteria group	Firmicutes	2.07155	39.6	-	FLMM01	57	2254	2047	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4021840	GCA_900088795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/795/GCA_900088795.1_1720	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.35626	57.5	-	FWMP01	21	5312	5097	3/29/17	4/3/17	Scaffold	SC	SAMEA4362634	GCA_900173615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/615/GCA_900173615.1_20925_2_105	-	VRCO0409
Pseudomonas aeruginosa JD320	1403038	PRJNA198782	198782	Proteobacteria	Gammaproteobacteria	6.40507	66.5	-	AWYJ01	2038	-	-	12/11/13	12/27/13	Contig	University of Ottawa	SAMN02360643	GCA_000506165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/165/GCA_000506165.1_JD320.contigs	24324153	JD320
Pseudomonas aeruginosa JD324	1403041	PRJNA198782	198782	Proteobacteria	Gammaproteobacteria	6.41318	66.5	-	AWYX01	2181	-	-	12/11/13	12/27/13	Contig	University of Ottawa	SAMN02360646	GCA_000506205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/205/GCA_000506205.1_JD324.contigs	24324153	JD324
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.62385	57.1	-	FWMK01	58	5636	5334	3/29/17	4/3/17	Scaffold	SC	SAMEA4362637	GCA_900173625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/625/GCA_900173625.1_20925_2_108	-	VRCO0412
Streptococcus pneumoniae	1313	PRJEB14250	359433	Terrabacteria group	Firmicutes	2.03661	39.6	-	FLMO01	60	2205	2012	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4021842	GCA_900088805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/805/GCA_900088805.1_20253	-	-
Escherichia coli O157:H7 str. K2191	1446672	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.15153	50.5	-	JHIV01	100	5455	5053	4/8/14	2/23/17	Contig	CDC	SAMN02353096	GCA_000618505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/505/GCA_000618505.1_EcK2191	25103754	K2191
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3512	65.6	-	MQBR01	23	4243	4074	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010156	GCA_001943105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/105/GCA_001943105.1_ASM194310v1	-	I0000362-9
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.94017	52.2	-	JYZR01	86	5086	4850	12/22/15	3/1/17	Contig	FDA	SAMN02699347	GCA_001481075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/075/GCA_001481075.1_Salmonella_enterica_CVM_N42467_v1.0	-	CVM N42467
Staphylococcus aureus M67953	1418412	PRJNA227701	227701	Terrabacteria group	Firmicutes	2.94482	32.7	-	JGMO01	14	3125	2963	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402625	GCA_000606685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/685/GCA_000606685.1_Stap_aure_M67953_V1	-	M67953
Staphylococcus aureus M72095_021113	1418414	PRJNA227703	227703	Terrabacteria group	Firmicutes	2.87906	32.7	-	JGMP01	16	3039	2880	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402627	GCA_000606705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/705/GCA_000606705.1_Stap_aure_M72095_021113_V1	-	M72095_021113
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91826	52.1	-	JYZU01	178	5079	4802	12/22/15	3/1/17	Contig	FDA	SAMN02699350	GCA_001481095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/095/GCA_001481095.1_Salmonella_enterica_CVM_N42472_v1.0	-	CVM N42472
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38367	65.6	-	MQBW01	21	4265	4097	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010161	GCA_001943125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/125/GCA_001943125.1_ASM194312v1	-	I0001048-3
Escherichia coli O157:H7 str. K2581	1446675	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.2484	50.4	-	JHIS01	114	5599	5167	4/8/14	2/23/17	Contig	CDC	SAMN02353099	GCA_000618525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/525/GCA_000618525.1_EcK2581	25103754	K2581
Streptococcus pneumoniae	1313	PRJEB14249	359435	Terrabacteria group	Firmicutes	2.03253	39.6	-	FLMN01	59	2194	1991	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4021841	GCA_900088815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/815/GCA_900088815.1_20007	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.62357	57.1	-	FWMN01	62	5665	5320	3/29/17	4/3/17	Scaffold	SC	SAMEA4362639	GCA_900173635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/635/GCA_900173635.1_20925_2_110	-	VRCO0414
Pseudomonas aeruginosa JD325	1403042	PRJNA198782	198782	Proteobacteria	Gammaproteobacteria	6.25834	66.6	-	AWYY01	2141	-	-	12/11/13	12/27/13	Contig	University of Ottawa	SAMN02360647	GCA_000506225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/225/GCA_000506225.1_JD325.contigs	24324153	JD325
Pseudomonas aeruginosa JD329	1403045	PRJNA198782	198782	Proteobacteria	Gammaproteobacteria	6.41012	66.4	-	AWZB01	2090	-	-	12/11/13	12/27/13	Contig	University of Ottawa	SAMN02360650	GCA_000506265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/265/GCA_000506265.1_JD329.contigs	24324153	JD329
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.59648	56.9	-	FWMR01	76	5688	5349	3/29/17	5/22/17	Scaffold	SC	SAMEA4362642	GCA_900173645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/645/GCA_900173645.1_20925_2_113	-	VRCO0422
Streptococcus pneumoniae	1313	PRJEB14285	359444	Terrabacteria group	Firmicutes	2.03853	39.6	-	FLND01	67	2195	2004	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4025215	GCA_900088835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/835/GCA_900088835.1_48565	-	-
Escherichia coli O157:H7 str. K2622	1446676	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.35461	50.3	-	JHIR01	95	5768	5328	4/8/14	2/23/17	Contig	CDC	SAMN02353100	GCA_000618545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/545/GCA_000618545.1_EcK2622	25103754	K2622
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39496	65.6	-	MQBU01	24	4271	4110	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010159	GCA_001943135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/135/GCA_001943135.1_ASM194313v1	-	I0000643-2
Salmonella enterica subsp. enterica serovar Anatum	58712	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.68645	52.3	-	JYZV01	48	4755	4535	12/22/15	3/1/17	Contig	FDA	SAMN02699351	GCA_001481105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/105/GCA_001481105.1_Salmonella_enterica_CVM_N42473-SQ_v1.0	-	CVM N42473
Staphylococcus aureus M91652	1418416	PRJNA227705	227705	Terrabacteria group	Firmicutes	2.85554	32.8	-	JGMQ01	65	3007	2850	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402629	GCA_000606725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/725/GCA_000606725.1_Stap_aure_M91652_V1	-	M91652
Staphylococcus aureus T15898	1418417	PRJNA227706	227706	Terrabacteria group	Firmicutes	2.90918	32.8	-	JGMR01	64	3057	2911	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402630	GCA_000606745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/745/GCA_000606745.1_Stap_aure_T15898_V1	-	T15898
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.80733	52.1	-	JYZX01	73	4958	4700	12/22/15	3/1/17	Contig	FDA	SAMN02699353	GCA_001481135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/135/GCA_001481135.1_Salmonella_enterica_CVM_N42479_v1.0	-	CVM N42479
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38827	65.6	-	MQBX01	14	4259	4100	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010162	GCA_001943185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/185/GCA_001943185.1_ASM194318v1	-	I0000473-4
Escherichia coli O157:H7 str. K2845	1446677	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.383	50.4	-	JHIQ01	127	5801	5332	4/8/14	2/23/17	Contig	CDC	SAMN02353101	GCA_000618565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/565/GCA_000618565.1_EcK2845	25103754	K2845
Streptococcus pneumoniae	1313	PRJEB14273	359454	Terrabacteria group	Firmicutes	2.09153	39.5	-	FLNC01	60	2262	2060	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4025162	GCA_900088855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/855/GCA_900088855.1_37666	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.62496	57.1	-	FWMS01	59	5649	5323	3/29/17	4/3/17	Scaffold	SC	SAMEA4362638	GCA_900173655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/655/GCA_900173655.1_20925_2_109	-	VRCO0413
Pseudomonas aeruginosa JD334	1403049	PRJNA198782	198782	Proteobacteria	Gammaproteobacteria	6.71325	66.2	-	AWZF01	2128	-	-	12/11/13	12/27/13	Contig	University of Ottawa	SAMN02360654	GCA_000506285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/285/GCA_000506285.1_JD334.contigs	24324153	JD334
Pseudomonas aeruginosa JD331	1403046	PRJNA198782	198782	Proteobacteria	Gammaproteobacteria	6.31264	66.4	-	AWZC01	2377	-	-	12/11/13	12/27/13	Contig	University of Ottawa	SAMN02360651	GCA_000506305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/305/GCA_000506305.1_JD331.contigs	24324153	JD331
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.42747	57.4	-	FWML01	71	5476	5181	3/29/17	4/3/17	Scaffold	SC	SAMEA4362643	GCA_900173665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/665/GCA_900173665.1_20925_2_114	-	VRCO0340
Streptococcus pneumoniae	1313	PRJEB14255	359430	Terrabacteria group	Firmicutes	2.10458	39.5	-	FLNA01	60	2278	2078	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4022019	GCA_900088865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/865/GCA_900088865.1_21299	-	-
Escherichia coli O157:H7 str. K2854	1446678	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.24221	50.3	-	JHIP01	74	5604	5185	4/8/14	2/23/17	Contig	CDC	SAMN02353102	GCA_000618585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/585/GCA_000618585.1_EcK2854	25103754	K2854
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35062	65.6	-	MQCA01	8	4237	4075	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010165	GCA_001943195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/195/GCA_001943195.1_ASM194319v1	-	I0003401-2
Salmonella enterica subsp. enterica serovar Mbandaka	192954	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.04546	52	-	JZAA01	114	5170	4878	12/22/15	3/1/17	Contig	FDA	SAMN02699356	GCA_001481155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/155/GCA_001481155.1_Salmonella_enterica_CVM_N42487-R_v1.0	-	CVM N42487
Staphylococcus aureus T15928	1418418	PRJNA227707	227707	Terrabacteria group	Firmicutes	2.89691	32.8	-	JGMS01	33	3047	2883	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402631	GCA_000606765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/765/GCA_000606765.1_Stap_aure_T15928_V1	-	T15928
Staphylococcus aureus T22074	1418420	PRJNA227709	227709	Terrabacteria group	Firmicutes	2.78422	32.8	-	JGMT01	39	2920	2763	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402633	GCA_000606785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/785/GCA_000606785.1_Stap_aure_T22074_V1	-	T22074
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.88501	52.1	-	JZAB01	182	5087	4761	12/22/15	3/1/17	Contig	FDA	SAMN02699357	GCA_001481175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/175/GCA_001481175.1_Salmonella_enterica_CVM_N42492_v1.0	-	CVM N42492
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38397	65.6	-	MQCD01	8	4260	4100	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010168	GCA_001943265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/265/GCA_001943265.1_ASM194326v1	-	I0002659-6
Escherichia coli O157:H7 str. K4396	1446679	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.36452	50.3	-	JHIO01	115	5798	5332	4/8/14	2/23/17	Contig	CDC	SAMN02353103	GCA_000618605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/605/GCA_000618605.1_EcK4396	25103754	K4396
Streptococcus pneumoniae	1313	PRJEB14279	359449	Terrabacteria group	Firmicutes	2.03407	39.6	-	FLMW01	66	2192	2002	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4025167	GCA_900088875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/875/GCA_900088875.1_43985	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.62744	57.1	-	FWMQ01	58	5657	5327	3/29/17	4/3/17	Scaffold	SC	SAMEA4362640	GCA_900173675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/675/GCA_900173675.1_20925_2_111	-	VRCO0415
Pseudomonas aeruginosa JD332	1403047	PRJNA198782	198782	Proteobacteria	Gammaproteobacteria	6.16612	66.6	-	AWZD01	2187	-	-	12/11/13	12/27/13	Contig	University of Ottawa	SAMN02360652	GCA_000506325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/325/GCA_000506325.1_JD332.contigs	24324153	JD332
Pseudomonas aeruginosa VRFPA09	1441931	PRJNA232744	232744	Proteobacteria	Gammaproteobacteria	6.71124	65.3	-	JAAO01	80	6564	6014	2/5/14	8/5/14	Contig	"SANKARA NETHRALAYA, VISION RESEARCH FOUNDATION"	SAMN02952969	GCA_000558345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/558/345/GCA_000558345.1_MDR_VRFPA09	-	VRFPA09
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.6091	57.1	-	FWMJ01	54	5636	5311	3/29/17	4/3/17	Scaffold	SC	SAMEA4362641	GCA_900173685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/685/GCA_900173685.1_20925_2_112	-	VRCO0416
Streptococcus pneumoniae	1313	PRJEB14282	359445	Terrabacteria group	Firmicutes	2.03261	39.6	-	FLNB01	56	2185	1997	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4025212	GCA_900088885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/885/GCA_900088885.1_46770	-	-
Escherichia coli O157:H7 str. K4406	1446681	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.4375	50.2	-	JHIM01	112	5852	5403	4/8/14	2/23/17	Contig	CDC	SAMN02353105	GCA_000618625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/625/GCA_000618625.1_EcK4406	25103754	K4406
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39276	65.6	-	MQCG01	5	4267	4103	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010172	GCA_001943275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/275/GCA_001943275.1_ASM194327v1	-	I0000068-2
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.95609	52.1	-	JZAD01	55	5131	4813	12/22/15	3/1/17	Contig	FDA	SAMN02699359	GCA_001481195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/195/GCA_001481195.1_Salmonella_enterica_CVM_N42502_v1.0	-	CVM N42502
Staphylococcus aureus T31892	1418421	PRJNA227710	227710	Terrabacteria group	Firmicutes	2.8981	32.7	-	JGMU01	17	3063	2899	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402634	GCA_000606805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/805/GCA_000606805.1_Stap_aure_T31892_V1	-	T31892
Staphylococcus aureus T59813	1418422	PRJNA227711	227711	Terrabacteria group	Firmicutes	2.89521	32.7	-	JGMV01	15	3057	2889	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402635	GCA_000606825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/825/GCA_000606825.1_Stap_aure_T59813_V1	-	T59813
Salmonella enterica subsp. enterica serovar Derby	28144	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.91676	52	-	JZAE01	64	5029	4773	12/22/15	3/1/17	Contig	FDA	SAMN02699360	GCA_001481215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/215/GCA_001481215.1_Salmonella_enterica_CVM_N42507_v1.0	-	CVM N42507
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39194	65.6	-	MQCE01	3	4264	4102	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010169	GCA_001943285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/285/GCA_001943285.1_ASM194328v1	-	I0002681-0
Escherichia coli O157:H7 str. K2192	1446673	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.41191	50.5	-	JHIU01	149	5862	5373	4/8/14	2/23/17	Contig	CDC	SAMN02353097	GCA_000618645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/645/GCA_000618645.1_EcK2192	25103754	K2192
Streptococcus pneumoniae	1313	PRJEB14256	359431	Terrabacteria group	Firmicutes	2.07102	39.5	-	FLUC01	75	2234	2033	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4022021	GCA_900088895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/895/GCA_900088895.1_27516	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.43471	57.4	-	FWMO01	57	5487	5194	3/29/17	4/3/17	Scaffold	SC	SAMEA4362644	GCA_900173695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/695/GCA_900173695.1_20925_2_115	-	VRCO0342
Pseudomonas aeruginosa VRFPA06	1423141	PRJNA227489	227489	Proteobacteria	Gammaproteobacteria	6.97503	65.8	-	AYSK01	277	6644	6277	12/11/13	3/14/14	Contig	"SANKARA NETHRALAYA, VISION RESEARCH FOUNDATION"	SAMN02472100	GCA_000567865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/567/865/GCA_000567865.1_MDRPA06	24604649	VRFPA06
Pseudomonas aeruginosa BK1	1453991	PRJNA236406	236406	Proteobacteria	Gammaproteobacteria	6.45116	66.3	-	JBTQ01	163	-	-	2/18/14	4/10/14	Contig	Aravind Medical Research Foundation	SAMN02596116	GCA_000572265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/265/GCA_000572265.1_PA01_BK1	24675850	BK1
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.79837	57.1	-	FWMT01	65	5908	5533	3/29/17	4/3/17	Scaffold	SC	SAMEA4362646	GCA_900173705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/705/GCA_900173705.1_20925_2_117	-	VRCO0375
Streptococcus pneumoniae	1313	PRJEB14280	359447	Terrabacteria group	Firmicutes	2.09137	39.6	-	FLUD01	58	2252	2065	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4025168	GCA_900088925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/925/GCA_900088925.1_44233	-	-
Escherichia coli O157:H7 str. K2324	1446674	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.29806	50.4	-	JHIT01	111	5695	5257	4/8/14	2/23/17	Contig	CDC	SAMN02353098	GCA_000618665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/665/GCA_000618665.1_EcK2324	25103754	K2324
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3993	65.6	-	MQCI01	17	4278	4109	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010174	GCA_001943295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/295/GCA_001943295.1_ASM194329v1	-	I0005710-4
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.16087	51.9	-	JZAH01	132	5278	5009	12/22/15	3/1/17	Contig	FDA	SAMN02699363	GCA_001481235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/235/GCA_001481235.1_Salmonella_enterica_CVM_N42518-SQ_v1.0	-	CVM N42518
Staphylococcus aureus T63897	1418423	PRJNA227712	227712	Terrabacteria group	Firmicutes	2.78025	32.8	-	JGMW01	45	2894	2698	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402636	GCA_000606845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/845/GCA_000606845.1_Stap_aure_T63897_V1	-	T63897
Staphylococcus aureus T63898	1418424	PRJNA227713	227713	Terrabacteria group	Firmicutes	2.78642	32.8	-	JGMX01	50	2908	2711	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402637	GCA_000606865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/865/GCA_000606865.1_Stap_aure_T63898_V1	-	T63898
Salmonella enterica subsp. enterica serovar Reading	165302	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.64637	52.2	-	JZAK01	46	4728	4475	12/22/15	3/1/17	Contig	FDA	SAMN02699366	GCA_001481255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/255/GCA_001481255.1_Salmonella_enterica_CVM_N43241_v1.0	-	CVM N43241
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40627	65.6	-	MQCL01	11	4285	4097	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010177	GCA_001943355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/355/GCA_001943355.1_ASM194335v1	-	I0003598-5
Escherichia coli O157:H7 str. K4527	1446682	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.46875	50.2	-	JHIL01	110	5906	5444	4/8/14	2/23/17	Contig	CDC	SAMN02353106	GCA_000618685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/685/GCA_000618685.1_EcK4527	25103754	K4527
Streptococcus pneumoniae	1313	PRJEB14278	359451	Terrabacteria group	Firmicutes	2.07588	39.6	-	FLNH01	70	2267	2067	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4025166	GCA_900088935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/935/GCA_900088935.1_43003	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.83377	57.1	-	FWMV01	82	5943	5563	3/29/17	4/3/17	Scaffold	SC	SAMEA4362647	GCA_900173715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/715/GCA_900173715.1_20925_2_118	-	VRCO0376
Pseudomonas aeruginosa JCM 5962	1236528	PRJDB616	243194	Proteobacteria	Gammaproteobacteria	6.07395	66.3	-	BAMA01	1198	-	-	4/1/14	9/16/15	Contig	The University of Tokyo	SAMD00003108	GCA_000615485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/485/GCA_000615485.1_ASM61548v1	-	JCM 5962
Pseudomonas aeruginosa JCM 6119	1236529	PRJDB617	243195	Proteobacteria	Gammaproteobacteria	6.49385	65.8	-	BAMB01	1377	-	-	4/1/14	9/16/15	Contig	The University of Tokyo	SAMD00004086	GCA_000615525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/525/GCA_000615525.1_ASM61552v1	-	JCM 6119
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.30472	57.5	-	FWNB01	35	5300	5074	3/29/17	4/3/17	Scaffold	SC	SAMEA4362648	GCA_900173725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/725/GCA_900173725.1_20925_2_119	-	VRCO0388
Streptococcus pneumoniae	1313	PRJEB14274	359455	Terrabacteria group	Firmicutes	2.07198	39.6	-	FLNF01	60	2254	2056	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4025163	GCA_900088945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/945/GCA_900088945.1_41617	-	-
Escherichia coli O157:H7 str. K5418	1446683	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.29442	50.2	-	JHII01	95	5664	5239	4/8/14	2/23/17	Contig	CDC	SAMN02353109	GCA_000618745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/745/GCA_000618745.1_EcK5418	25103754	K5418
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39209	65.6	-	MQCO01	12	4267	4100	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010180	GCA_001943375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/375/GCA_001943375.1_ASM194337v1	-	I0005755-9
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.79954	52.1	-	JYZY01	47	4930	4691	12/22/15	3/1/17	Contig	FDA	SAMN02699354	GCA_001481325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/325/GCA_001481325.1_Salmonella_enterica_CVM_N42480_v1.0	-	CVM N42480
Staphylococcus aureus W27852	1418427	PRJNA227716	227716	Terrabacteria group	Firmicutes	2.937	32.7	-	JGMZ01	19	3098	2957	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402640	GCA_000606885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/885/GCA_000606885.1_Stap_aure_W27852_V1	-	W27852
Staphylococcus aureus W34837	1418428	PRJNA227717	227717	Terrabacteria group	Firmicutes	2.83272	32.8	-	JGNA01	44	2972	2805	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402641	GCA_000606905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/905/GCA_000606905.1_Stap_aure_W34837_V1	-	W34837
Salmonella enterica subsp. enterica serovar Reading	165302	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	4.8399	52.2	-	JZAJ01	154	4991	4716	12/22/15	3/1/17	Contig	FDA	SAMN02699365	GCA_001481335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/481/335/GCA_001481335.1_Salmonella_enterica_CVM_N42528-SQ_v1.0	-	CVM N42528
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39454	65.6	-	MQCM01	5	4265	4105	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010178	GCA_001943385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/385/GCA_001943385.1_ASM194338v1	-	I0000169-8
Escherichia coli O157:H7 str. K5448	1446684	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.28054	50.3	-	JHIH01	69	5624	5203	4/8/14	2/23/17	Contig	CDC	SAMN02353110	GCA_000618765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/765/GCA_000618765.1_EcK5448	25103754	K5448
Streptococcus pneumoniae	1313	PRJEB14284	359443	Terrabacteria group	Firmicutes	2.03837	39.6	-	FLUH01	67	2205	2018	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4025214	GCA_900088955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/955/GCA_900088955.1_47301	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.58391	57.2	-	FWMU01	111	5665	5327	3/29/17	4/3/17	Scaffold	SC	SAMEA4362645	GCA_900173735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/735/GCA_900173735.1_20925_2_116	-	VRCO0364
Pseudomonas aeruginosa JCM 14847	1236530	PRJDB618	243196	Proteobacteria	Gammaproteobacteria	5.99163	66.2	-	BAMC01	1245	-	-	4/1/14	9/16/15	Contig	The University of Tokyo	SAMD00009096	GCA_000615565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/565/GCA_000615565.1_ASM61556v1	-	JCM 14847
Pseudomonas aeruginosa C1913C	1441460	PRJNA232482	232482	Proteobacteria	Gammaproteobacteria	6.82724	66.2	-	JGZX01	22	6265	5760	6/12/14	6/12/14	Contig	University of Texas at Austin	SAMN02485458	GCA_000705155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/155/GCA_000705155.1_RH_utaHolly_2	-	C1913C
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.30824	57.5	-	FWMW01	40	5302	5078	3/29/17	4/3/17	Scaffold	SC	SAMEA4362650	GCA_900173745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/745/GCA_900173745.1_20925_2_121	-	VRCO0390
Streptococcus pneumoniae	1313	PRJEB14281	359448	Terrabacteria group	Firmicutes	2.07465	39.6	-	FLUG01	65	2251	2058	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4025169	GCA_900088975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/975/GCA_900088975.1_46048	-	-
Escherichia coli O157:H7 str. K5449	1446685	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.30033	50.3	-	JHIG01	94	5675	5227	4/8/14	2/23/17	Contig	CDC	SAMN02353111	GCA_000618785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/785/GCA_000618785.1_EcK5449	25103754	K5449
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38815	65.6	-	MQCS01	7	4262	4097	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010184	GCA_001943435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/435/GCA_001943435.1_ASM194343v1	-	I0005669-2
Salmonella enterica subsp. enterica serovar Gallinarum	594	PRJNA302466	302466	Proteobacteria	Gammaproteobacteria	4.7029	52.2	-	LNON01	34	4800	4357	1/5/16	3/1/17	Contig	Universidade Luterana do Brasil	SAMN04274130	GCA_001484835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/835/GCA_001484835.1_ASM148483v1	26950322	BR_RS12
Staphylococcus aureus W34839	1418429	PRJNA227718	227718	Terrabacteria group	Firmicutes	2.82042	32.8	-	JGNB01	40	2954	2784	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402642	GCA_000606925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/925/GCA_000606925.1_Stap_aure_W34839_V1	-	W34839
Staphylococcus aureus W34841	1418430	PRJNA227719	227719	Terrabacteria group	Firmicutes	2.88758	32.8	-	JGNC01	53	3019	2872	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402643	GCA_000606945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/945/GCA_000606945.1_Stap_aure_W34841_V1	-	W34841
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183851	183851	Proteobacteria	Gammaproteobacteria	4.79177	52.2	-	LRNJ01	62	4868	4530	1/25/16	3/1/17	Contig	Washington State Department of Health Public Health Laboratory	SAMN02261208	GCA_001534835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/835/GCA_001534835.1_ASM153483v1	-	CFSAN001377
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38768	65.6	-	MQCU01	2	4259	4096	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010186	GCA_001943445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/445/GCA_001943445.1_ASM194344v1	-	I0005363-2
Escherichia coli O157:H7 str. K5453	1446686	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.24942	50.3	-	JHIF01	73	5586	5166	4/8/14	2/23/17	Contig	CDC	SAMN02353112	GCA_000618805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/805/GCA_000618805.1_EcK5453	25103754	K5453
Streptococcus pneumoniae	1313	PRJEB14283	359446	Terrabacteria group	Firmicutes	2.07679	39.6	-	FLUF01	58	2233	2044	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4025213	GCA_900088995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/995/GCA_900088995.1_46464	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.31141	57.5	-	FWMZ01	40	5309	5077	3/29/17	4/3/17	Scaffold	SC	SAMEA4362649	GCA_900173755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/755/GCA_900173755.1_20925_2_120	-	VRCO0389
Pseudomonas aeruginosa C0324C	1441461	PRJNA232482	232482	Proteobacteria	Gammaproteobacteria	6.63104	66	-	JGZY01	539	6151	5735	6/12/14	6/12/14	Contig	University of Texas at Austin	SAMN02485459	GCA_000705195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/195/GCA_000705195.1_RH_uta_asm_3_0324	-	C0324C
Pseudomonas aeruginosa C2159M	1441462	PRJNA232482	232482	Proteobacteria	Gammaproteobacteria	6.38229	66.5	-	JGZZ01	12	5783	5378	6/12/14	6/12/14	Contig	University of Texas at Austin	SAMN02485508	GCA_000705215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/215/GCA_000705215.1_RH_utaHolly_4	-	C2159M
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.30605	57.5	-	FWNA01	35	5300	5071	3/29/17	4/3/17	Scaffold	SC	SAMEA4362651	GCA_900173765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/765/GCA_900173765.1_20925_2_122	-	VRCO0391
Streptococcus pneumoniae	1313	PRJEB14275	359452	Terrabacteria group	Firmicutes	2.09893	39.5	-	FLNG01	70	2253	2063	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4025164	GCA_900089015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/015/GCA_900089015.1_41844	-	-
Escherichia coli O157:H7 str. K5467	1446688	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.35029	50.2	-	JHID01	99	5765	5313	4/8/14	2/23/17	Contig	CDC	SAMN02353114	GCA_000618825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/825/GCA_000618825.1_EcK5467	25103754	K5467
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38184	65.6	-	MQCR01	8	4261	4095	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010183	GCA_001943485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/485/GCA_001943485.1_ASM194348v1	-	I0001031-9
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183851	183851	Proteobacteria	Gammaproteobacteria	4.8235	52.1	-	LRNI01	95	4932	4510	1/25/16	3/1/17	Contig	Washington State Department of Health Public Health Laboratory	SAMN02261212	GCA_001534845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/845/GCA_001534845.1_ASM153484v1	-	CFSAN001381
Staphylococcus aureus W34848	1418431	PRJNA227720	227720	Terrabacteria group	Firmicutes	2.90422	32.7	-	JGND01	50	3044	2865	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402644	GCA_000606965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/965/GCA_000606965.1_Stap_aure_W34848_V1	-	W34848
Staphylococcus aureus W41757	1418432	PRJNA227721	227721	Terrabacteria group	Firmicutes	2.92231	32.8	-	JGNE01	50	3069	2927	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402645	GCA_000606985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/606/985/GCA_000606985.1_Stap_aure_W41757_V1	-	W41757
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183847	183847	Proteobacteria	Gammaproteobacteria	4.79327	52.2	-	LROI01	78	4858	4537	1/25/16	3/1/17	Contig	 Arizona State Public Health Laboratory	SAMN02261185	GCA_001534905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/905/GCA_001534905.1_ASM153490v1	-	CFSAN001344
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38496	65.6	-	MQCV01	10	4260	4097	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010187	GCA_001943495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/495/GCA_001943495.1_ASM194349v1	-	I0004842-6
Escherichia coli O157:H7 str. K5602	1446689	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.39446	50.3	-	JHIC01	144	5853	5379	4/8/14	2/23/17	Contig	CDC	SAMN02353115	GCA_000618845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/845/GCA_000618845.1_EcK5602	25103754	K5602
Streptococcus pneumoniae	1313	PRJEB14260	359427	Terrabacteria group	Firmicutes	2.06106	39.5	-	FLMZ01	51	2213	2015	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4022022	GCA_900089045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/045/GCA_900089045.1_23543	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.59345	56.8	-	FWMY01	89	5712	5293	3/29/17	6/9/17	Scaffold	SC	SAMEA4362652	GCA_900173775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/775/GCA_900173775.1_20925_2_123	-	VRCO0426
Pseudomonas aeruginosa	287	PRJNA241480	241480	Proteobacteria	Gammaproteobacteria	6.11017	65.7	-	JHEU01	2493	5873	4838	6/12/14	6/12/14	Contig	National Center for Biotechnology	SAMN02690715	GCA_000705235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/235/GCA_000705235.1_Pseudomonas	-	KIB
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.34237	66.2	-	LBLT01	515	-	-	5/5/15	5/5/15	Contig	University of Toronto	SAMN03566229	GCA_000987945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/987/945/GCA_000987945.1_ASM98794v1	-	Pae_CF67.01a
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.59889	56.8	-	FWNC01	83	5682	5316	3/29/17	4/3/17	Scaffold	SC	SAMEA4362654	GCA_900173785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/785/GCA_900173785.1_20925_2_125	-	VRCO0436
Streptococcus pneumoniae	1313	PRJEB14253	359432	Terrabacteria group	Firmicutes	2.03529	39.6	-	FLMY01	60	2196	2002	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4022017	GCA_900089065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/065/GCA_900089065.1_21295	-	-
Escherichia coli O157:H7 str. K5607	1446690	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.28535	50.2	-	JHIB01	105	5648	5233	4/8/14	2/23/17	Contig	CDC	SAMN02353116	GCA_000618865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/865/GCA_000618865.1_EcK5607	25103754	K5607
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38138	65.6	-	MQCY01	16	4271	4094	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010190	GCA_001943505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/505/GCA_001943505.1_ASM194350v1	-	I0000024-5
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.89353	52.1	-	LRNH01	162	5039	4636	1/25/16	3/1/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN02261214	GCA_001534985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/985/GCA_001534985.1_ASM153498v1	-	CFSAN001383
Staphylococcus aureus W45421	1418434	PRJNA227723	227723	Terrabacteria group	Firmicutes	2.87643	32.8	-	JGNF01	31	3021	2882	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402647	GCA_000607005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/005/GCA_000607005.1_Stap_aure_W45421_V1	-	W45421
Staphylococcus aureus W75242	1418435	PRJNA227724	227724	Terrabacteria group	Firmicutes	2.76541	32.7	-	JGNG01	32	2876	2710	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402648	GCA_000607025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/025/GCA_000607025.1_Stap_aure_W75242_V1	-	W75242
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183847	183847	Proteobacteria	Gammaproteobacteria	4.78964	52.1	-	LROF01	144	4887	4492	1/25/16	3/1/17	Contig	 Arizona State Public Health Laboratory	SAMN02261189	GCA_001535025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/025/GCA_001535025.1_ASM153502v1	-	CFSAN001349
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37378	65.6	-	MQCX01	10	4258	4094	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010189	GCA_001943515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/515/GCA_001943515.1_ASM194351v1	-	I0004172-8
Escherichia coli O157:H7 str. K5460	1446687	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.18618	50.3	-	JHIE01	58	5453	5057	4/8/14	2/23/17	Contig	CDC	SAMN02353113	GCA_000618885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/885/GCA_000618885.1_EcK5460	25103754	K5460
Streptococcus pneumoniae	1313	PRJEB14266	359423	Terrabacteria group	Firmicutes	2.03934	39.6	-	FLNJ01	58	2203	2011	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4025130	GCA_900089085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/085/GCA_900089085.1_37119	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.59341	56.9	-	FWMX01	86	5657	5328	3/29/17	4/3/17	Scaffold	SC	SAMEA4362653	GCA_900173795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/795/GCA_900173795.1_20925_2_124	-	VRCO0433
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.31728	66.1	-	LCSO01	594	-	-	5/14/15	5/14/15	Contig	University of Toronto	SAMN03566233	GCA_001007355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/355/GCA_001007355.1_ASM100735v1	-	Pae_CF67.01e
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.32995	66.1	-	LEFQ01	469	-	-	6/22/15	6/22/15	Contig	University of Toronto	SAMN03566344	GCA_001034695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/695/GCA_001034695.1_ASM103469v1	-	Pae_CF67.06t
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.15737	57.6	-	FWNE01	25	5148	4945	3/29/17	4/3/17	Scaffold	SC	SAMEA4362655	GCA_900173805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/805/GCA_900173805.1_20925_2_126	-	VRCO0443
Streptococcus pneumoniae	1313	PRJEB14271	359456	Terrabacteria group	Firmicutes	2.08656	39.5	-	FLNI01	59	2264	2067	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4025161	GCA_900089095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/095/GCA_900089095.1_41023	-	-
Escherichia coli O104:H21 str. 94-3025	1446497	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	4.80244	50.7	-	JHJZ01	43	4941	4646	4/8/14	2/23/17	Contig	CDC	SAMN02353066	GCA_000618965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/965/GCA_000618965.1_Ec94-3025	25103754	94-3025
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3868	65.6	-	MQDG01	12	4271	4101	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010198	GCA_001943565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/565/GCA_001943565.1_ASM194356v1	-	I0005705-4
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183851	183851	Proteobacteria	Gammaproteobacteria	4.78824	52.1	-	LROD01	394	4992	4507	1/25/16	3/1/17	Contig	Washington State Department of Health Public Health Laboratory	SAMN02261192	GCA_001535085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/085/GCA_001535085.1_ASM153508v1	-	CFSAN001352
Staphylococcus aureus W75262	1418436	PRJNA227725	227725	Terrabacteria group	Firmicutes	2.87411	32.8	-	JGNH01	30	3042	2880	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402649	GCA_000607045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/045/GCA_000607045.1_Stap_aure_W75262_V1	-	W75262
Staphylococcus aureus W76995	1418437	PRJNA227726	227726	Terrabacteria group	Firmicutes	2.96388	32.7	-	JGNI01	17	3154	2992	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402650	GCA_000607065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/065/GCA_000607065.1_Stap_aure_W76995_V1	-	W76995
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.78068	52.2	-	LROC01	247	4924	4519	1/25/16	3/1/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN02261194	GCA_001535095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/095/GCA_001535095.1_ASM153509v1	-	CFSAN001354
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38139	65.6	-	MQDC01	4	4259	4098	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010194	GCA_001943575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/575/GCA_001943575.1_ASM194357v1	-	I0004251-0
Escherichia coli O118:H16 str. 2009C-4446	1446549	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.43479	50.4	-	JHGP01	113	5935	5451	4/8/14	2/23/17	Contig	CDC	SAMN02352945	GCA_000619025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/025/GCA_000619025.1_Ec2009C-4446	25103754	2009C-4446
Streptococcus pneumoniae	1313	PRJEB14269	359422	Terrabacteria group	Firmicutes	2.03854	39.6	-	FLNE01	57	2217	2017	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4025132	GCA_900089105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/105/GCA_900089105.1_44017	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.11717	58.1	-	FWNG01	14	5072	4846	3/29/17	4/3/17	Scaffold	SC	SAMEA4362658	GCA_900173815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/815/GCA_900173815.1_20925_2_129	-	VRCO0462
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.3655	66.3	-	LEIT01	303	-	-	6/22/15	6/22/15	Contig	University of Toronto	SAMN03566425	GCA_001036075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/075/GCA_001036075.1_ASM103607v1	-	Pae_CF67.11a
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.33262	66	-	LEGM01	501	-	-	6/22/15	6/22/15	Contig	University of Toronto	SAMN03566366	GCA_001037435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/435/GCA_001037435.1_ASM103743v1	-	Pae_CF67.08b
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.28322	57.3	-	FWND01	29	5237	5011	3/29/17	4/3/17	Scaffold	SC	SAMEA4362656	GCA_900173835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/835/GCA_900173835.1_20925_2_127	-	VRCO0447
Streptococcus pneumoniae	1313	PRJEB14265	359425	Terrabacteria group	Firmicutes	2.04024	39.6	-	FLUE01	61	2206	2020	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4025129	GCA_900089115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/115/GCA_900089115.1_36180	-	-
Escherichia coli O45:H2 str. 2009C-4780	1446742	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.20158	50.5	-	JHGJ01	78	5566	5128	4/8/14	2/23/17	Contig	CDC	SAMN02352951	GCA_000619105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/105/GCA_000619105.1_Ec2009C-4780	25103754	2009C-4780
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39058	65.6	-	MQDF01	15	4264	4097	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010197	GCA_001943585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/585/GCA_001943585.1_ASM194358v1	-	I0002012-8
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183848	183848	Proteobacteria	Gammaproteobacteria	4.78617	52.2	-	LROB01	351	4970	4487	1/25/16	3/1/17	Contig	Florida Department of Health	SAMN02261195	GCA_001535125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/125/GCA_001535125.1_ASM153512v1	-	CFSAN001355
Staphylococcus aureus W80013	1418439	PRJNA227728	227728	Terrabacteria group	Firmicutes	2.88581	32.8	-	JGNJ01	72	3056	2869	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402652	GCA_000607085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/085/GCA_000607085.1_Stap_aure_W80013_V1	-	W80013
Staphylococcus aureus W82228	1418442	PRJNA227731	227731	Terrabacteria group	Firmicutes	2.80473	32.8	-	JGNK01	41	2921	2775	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402655	GCA_000607105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/105/GCA_000607105.1_Stap_aure_W82228_V1	-	W82228
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183847	183847	Proteobacteria	Gammaproteobacteria	4.7985	52.2	-	LROA01	235	4916	4533	1/25/16	3/1/17	Contig	 Arizona State Public Health Laboratory	SAMN02261197	GCA_001535145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/145/GCA_001535145.1_ASM153514v1	-	CFSAN001366
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38871	65.6	-	MQDB01	3	4260	4109	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010193	GCA_001943595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/595/GCA_001943595.1_ASM194359v1	-	M0014412-2
Escherichia coli O157:H7 str. 2009EL1449	1446618	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.5191	50.2	-	JHGF01	139	5971	5470	4/8/14	2/23/17	Contig	CDC	SAMN02352955	GCA_000619145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/145/GCA_000619145.1_Ec2009EL1449	25103754	2009EL1449
Streptococcus pneumoniae	1313	PRJEB14272	359457	Terrabacteria group	Firmicutes	2.06975	39.6	-	FLNK01	68	2239	2050	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4026663	GCA_900089225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/225/GCA_900089225.1_37752	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.11618	58.1	-	FWNJ01	18	5073	4845	3/29/17	4/3/17	Scaffold	SC	SAMEA4362659	GCA_900173845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/845/GCA_900173845.1_20925_2_130	-	VRCO0465
Pseudomonas aeruginosa	287	PRJNA288262	288262	Proteobacteria	Gammaproteobacteria	7.72879	66.9	-	LFMZ01	44	6420	5252	7/2/15	7/2/15	Contig	"Vision Research Foundation, Sankara Nethralaya"	SAMN03797531	GCA_001045515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/515/GCA_001045515.1_ASM104551v1	-	VRFPA10
Pseudomonas aeruginosa	287	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	11.9727	59.8	-	JUPS01	2791	-	-	7/10/15	7/13/16	Contig	University of Washington	SAMN03198082	GCA_001067615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/615/GCA_001067615.1_ASM106761v1	26230489	875_PAER
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.11893	58.1	-	FWNH01	16	5082	4845	3/29/17	4/3/17	Scaffold	SC	SAMEA4362661	GCA_900173855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/855/GCA_900173855.1_20925_2_132	-	VRCO0467
Streptococcus pneumoniae	1313	PRJEB14277	359450	Terrabacteria group	Firmicutes	2.11541	39.6	-	FLUI01	67	2314	2120	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4026665	GCA_900089255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/255/GCA_900089255.1_42694	-	-
Escherichia coli O157:H7 str. 2009EL1913	1446620	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.2235	50.4	-	JHGD01	84	5551	5152	4/8/14	2/23/17	Contig	CDC	SAMN02352957	GCA_000619165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/165/GCA_000619165.1_Ec2009EL1913	25103754	2009EL1913
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34938	65.6	-	MQDJ01	9	4240	4076	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010201	GCA_001943645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/645/GCA_001943645.1_ASM194364v1	-	I0005345-9
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183847	183847	Proteobacteria	Gammaproteobacteria	4.782	52.2	-	LRNZ01	250	4946	4482	1/25/16	3/1/17	Contig	 Arizona State Public Health Laboratory	SAMN02261201	GCA_001535165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/165/GCA_001535165.1_ASM153516v1	-	CFSAN001370
Staphylococcus aureus W89577	1418443	PRJNA227732	227732	Terrabacteria group	Firmicutes	2.84291	32.8	-	JGNL01	43	2981	2816	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402656	GCA_000607125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/125/GCA_000607125.1_Stap_aure_W89577_V1	-	W89577
Staphylococcus aureus W89579	1418444	PRJNA227733	227733	Terrabacteria group	Firmicutes	2.84689	32.8	-	JGNM01	34	2987	2816	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02402657	GCA_000607145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/145/GCA_000607145.1_Stap_aure_W89579_V1	-	W89579
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183848	183848	Proteobacteria	Gammaproteobacteria	4.78591	52.1	-	LRNY01	261	4960	4535	1/25/16	3/1/17	Contig	Florida Department of Health	SAMN02261207	GCA_001535175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/175/GCA_001535175.1_ASM153517v1	-	CFSAN001376
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40154	65.6	-	MQDI01	11	4284	4115	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010200	GCA_001943655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/655/GCA_001943655.1_ASM194365v1	-	I0004013-4
Escherichia coli O145:NM str. 2010C-3508	1446588	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.4645	50.5	-	JHFV01	115	5838	5303	4/8/14	2/23/17	Contig	CDC	SAMN02352966	GCA_000619185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/185/GCA_000619185.1_Ec2010C-3508	25103754	2010C-3508
Streptococcus pneumoniae	1313	PRJEB14259	359429	Terrabacteria group	Firmicutes	2.09122	39.6	-	FLUJ01	81	2269	2075	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4026666	GCA_900089345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/345/GCA_900089345.1_23150	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.1179	58.1	-	FWNF01	13	5079	4840	3/29/17	4/3/17	Scaffold	SC	SAMEA4362660	GCA_900173865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/865/GCA_900173865.1_20925_2_131	-	VRCO0466
Pseudomonas aeruginosa	287	PRJEB9312	287242	Proteobacteria	Gammaproteobacteria	11.8486	65.9	-	CVWF01	861	10998	10866	6/23/15	6/23/15	Contig	PHE	SAMEA3374668	GCA_001181985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/181/985/GCA_001181985.1_E15_London_28_01_14	-	E15_London_28_01_14
Pseudomonas aeruginosa	287	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	6.84661	65.8	-	LORM01	5	6362	5292	12/21/15	12/21/15	Contig	US Food and Drug Administration 	SAMN03996297	GCA_001471355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/355/GCA_001471355.1_ASM147135v1	-	FDAARGOS_154
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.11835	58.1	-	FWNK01	15	5075	4844	3/29/17	4/3/17	Scaffold	SC	SAMEA4362662	GCA_900173875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/875/GCA_900173875.1_20925_2_133	-	VRCO0468
Streptococcus pneumoniae	1313	PRJEB14261	359428	Terrabacteria group	Firmicutes	2.06315	39.5	-	FLNL02	65	2212	2025	12/30/16	6/10/17	Contig	CEBITEC	SAMEA4027820	GCA_900089475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/475/GCA_900089475.2_27401b	-	-
Escherichia coli O121:H7 str. 2009C-3299	1446578	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.08329	50.7	-	JHHC01	31	5276	4959	4/8/14	2/23/17	Contig	CDC	SAMN02352931	GCA_000619245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/245/GCA_000619245.1_Ec2009C-3299	25103754	2009C-3299
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38602	65.6	-	MQDL01	16	4268	4093	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010203	GCA_001943665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/665/GCA_001943665.1_ASM194366v1	-	I0005322-8
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183847	183847	Proteobacteria	Gammaproteobacteria	4.76924	52.2	-	LRNX01	532	5018	4447	1/25/16	3/1/17	Contig	 Arizona State Public Health Laboratory	SAMN02261209	GCA_001535195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/195/GCA_001535195.1_ASM153519v1	-	CFSAN001378
Staphylococcus aureus DAR3518	1422120	PRJNA228201	228201	Terrabacteria group	Firmicutes	2.93175	32.8	-	JGNQ01	11	3065	2898	3/27/14	3/4/17	Scaffold	Broad Institute	SAMN02403670	GCA_000607305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/305/GCA_000607305.1_Stap_aure_DAR3518_V1	-	DAR3518
Staphylococcus aureus DAR3519	1422121	PRJNA228202	228202	Terrabacteria group	Firmicutes	2.84153	32.8	-	JGNR01	4	2955	2791	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403671	GCA_000607325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/325/GCA_000607325.1_Stap_aure_DAR3519_V1	-	DAR3519
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183848	183848	Proteobacteria	Gammaproteobacteria	4.77327	52.1	-	LRNV01	428	5005	4452	1/25/16	3/1/17	Contig	Florida Department of Health	SAMN02261211	GCA_001535255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/255/GCA_001535255.1_ASM153525v1	-	CFSAN001380
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36991	65.5	-	MQDM01	18	4272	4093	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010204	GCA_001943675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/675/GCA_001943675.1_ASM194367v1	-	I0003518-3
Escherichia coli O91:NM str. 2009C-3745	1446768	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.33042	50.7	-	JHGW01	125	5804	5242	4/8/14	2/23/17	Contig	CDC	SAMN02352938	GCA_000619305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/305/GCA_000619305.1_Ec2009C-3745	25103754	2009C-3745
Streptococcus pneumoniae	1313	PRJEB14316	359463	Terrabacteria group	Firmicutes	2.0387	39.6	-	FLNM01	60	2189	2002	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4027047	GCA_900089485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/485/GCA_900089485.1_20605	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.33837	57.4	-	FWNN01	34	5381	5123	3/29/17	4/3/17	Scaffold	SC	SAMEA4362663	GCA_900173885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/885/GCA_900173885.1_20925_2_134	-	VRCO0469
Pseudomonas aeruginosa	287	PRJNA291357	291357	Proteobacteria	Gammaproteobacteria	6.84729	65.8947	plasmid pBH6:CM003767.1	LGVH01	782	6417	5762	2/2/16	2/8/16	Contig	UNESP-FCAV	SAMN03943237	GCA_001547575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/575/GCA_001547575.1_ASM154757v1	-	BH6
Pseudomonas aeruginosa	287	PRJNA310701	310701	Proteobacteria	Gammaproteobacteria	6.79926	65.9	-	LRXM01	299	6320	4110	4/4/16	4/4/16	Contig	Christian Medical College	SAMN04454421	GCA_001605875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/875/GCA_001605875.1_ASM160587v1	-	CMC_VB_PA_B22862
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.57195	57.1	-	FWNL01	120	5640	5259	3/29/17	4/10/17	Scaffold	SC	SAMEA4362664	GCA_900173895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/895/GCA_900173895.1_20925_2_135	-	VRCO0332
Streptococcus pneumoniae	1313	PRJEB14263	359426	Terrabacteria group	Firmicutes	2.05691	39.6	-	FLSW01	58	2207	2015	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4051576	GCA_900092055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/055/GCA_900092055.1_27700b	-	-
Escherichia coli O145:H28 str. 2009C-3292	1446584	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.19178	50.4	-	JHHD01	72	5590	5108	4/8/14	2/23/17	Contig	CDC	SAMN02352930	GCA_000619345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/345/GCA_000619345.1_Ec2009C-3292	25103754	2009C-3292
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38195	65.6	-	MQDP01	6	4257	4092	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010207	GCA_001943725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/725/GCA_001943725.1_ASM194372v1	-	I0004608-1
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183851	183851	Proteobacteria	Gammaproteobacteria	4.78577	52.2	-	LRNU01	265	4959	4461	1/25/16	3/1/17	Contig	Washington State Department of Health Public Health Laboratory	SAMN02261216	GCA_001535285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/285/GCA_001535285.1_ASM153528v1	-	CFSAN001385
Staphylococcus aureus DAR3525	1422122	PRJNA228203	228203	Terrabacteria group	Firmicutes	2.93617	32.9	-	JGNS01	8	3102	2928	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403672	GCA_000607345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/345/GCA_000607345.1_Stap_aure_DAR3525_V1	-	DAR3525
Staphylococcus aureus DAR3529	1422123	PRJNA228204	228204	Terrabacteria group	Firmicutes	2.89213	32.9	-	JGNT01	7	3025	2861	3/27/14	3/4/17	Scaffold	Broad Institute	SAMN02403673	GCA_000607365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/365/GCA_000607365.1_Stap_aure_DAR3529_V1	-	DAR3529
Salmonella enterica subsp. enterica serovar Tennessee str. 2691	1029981	PRJNA66695	66695	Proteobacteria	Gammaproteobacteria	4.74644	52.2	-	LRNQ01	48	4789	4524	1/25/16	3/1/17	Contig	FDA	SAMN02568576	GCA_001535365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/365/GCA_001535365.1_ASM153536v1	-	2691
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34451	65.6	-	MQDQ01	16	4236	4074	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010208	GCA_001943735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/735/GCA_001943735.1_ASM194373v1	-	I0003154-7
Escherichia coli O157:H7 str. K5852	1446693	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.3003	50.3	-	JHHY01	92	5650	5240	4/8/14	2/23/17	Contig	CDC	SAMN02353119	GCA_000619365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/365/GCA_000619365.1_EcK5852	25103754	K5852
Streptococcus pneumoniae	1313	PRJEB14270	359458	Terrabacteria group	Firmicutes	2.14092	39.5	-	FLSX01	61	2316	2117	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4051579	GCA_900092075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/075/GCA_900092075.1_40086b	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.57609	57	-	FWNO01	75	5632	5296	3/29/17	4/3/17	Scaffold	SC	SAMEA4362668	GCA_900173905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/905/GCA_900173905.1_20925_2_139	-	VRCO0256
Pseudomonas aeruginosa	287	PRJNA321095	321095	Proteobacteria	Gammaproteobacteria	6.30211	66.7	-	MKEN01	2616	6307	4196	9/30/16	9/30/16	Contig	"Zhongshan School of Medicine, Sun Yat-sen University"	SAMN04966047	GCA_001750435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/750/435/GCA_001750435.1_ASM175043v1	-	PA09ZY10
Pseudomonas aeruginosa	287	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	6.77346	65.9	-	MPBT01	219	6619	6545	11/10/16	12/16/16	Contig	Centers for Disease Control and Prevention	SAMN04014931	GCA_001874955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/955/GCA_001874955.1_ASM187495v1	-	AR_0090
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.30879	57.5	-	FWNM01	33	5318	5082	3/29/17	4/3/17	Scaffold	SC	SAMEA4362667	GCA_900173915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/915/GCA_900173915.1_20925_2_138	-	VRCO0196
Streptococcus pneumoniae	1313	PRJEB14264	359424	Terrabacteria group	Firmicutes	2.06431	39.5	-	FLSY01	68	2230	2035	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4051577	GCA_900092095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/095/GCA_900092095.1_28838b	-	-
Escherichia coli O157:H7 str. K6590	1446694	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.46879	50.3	-	JHHX01	162	5969	5471	4/8/14	2/23/17	Contig	CDC	SAMN02353120	GCA_000619385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/385/GCA_000619385.1_EcK6590	25103754	K6590
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38896	65.6	-	MQDS01	14	4262	4096	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010210	GCA_001943745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/745/GCA_001943745.1_ASM194374v1	-	M0017310-5
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183847	183847	Proteobacteria	Gammaproteobacteria	4.80086	52.2	-	LRNP01	92	4883	4562	1/25/16	3/1/17	Contig	 Arizona State Public Health Laboratory	SAMN02261193	GCA_001535385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/385/GCA_001535385.1_ASM153538v1	-	CFSAN001353
Staphylococcus aureus DAR3534	1422124	PRJNA228205	228205	Terrabacteria group	Firmicutes	2.82131	32.8	-	JGNU01	6	2919	2754	3/27/14	3/4/17	Scaffold	Broad Institute	SAMN02403674	GCA_000607385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/385/GCA_000607385.1_Stap_aure_DAR3534_V1	-	DAR3534
Staphylococcus aureus DAR3548	1422125	PRJNA228206	228206	Terrabacteria group	Firmicutes	2.86057	32.8	-	JGNV01	10	3016	2854	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403675	GCA_000607405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/405/GCA_000607405.1_Stap_aure_DAR3548_V1	-	DAR3548
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.79002	52.2	-	LRNO01	105	4889	4538	1/25/16	3/1/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN02261198	GCA_001535405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/405/GCA_001535405.1_ASM153540v1	-	CFSAN001367
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39001	65.6	-	MQDT01	17	4263	4095	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010211	GCA_001943755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/755/GCA_001943755.1_ASM194375v1	-	I0004898-8
Escherichia coli O157:H7 str. K6676	1446695	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.24388	50.3	-	JHHW01	85	5607	5172	4/8/14	2/23/17	Contig	CDC	SAMN02353121	GCA_000619405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/405/GCA_000619405.1_EcK6676	25103754	K6676
Streptococcus pneumoniae	1313	PRJEB14276	359453	Terrabacteria group	Firmicutes	2.03584	39.6	-	FLSZ01	58	2192	2004	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4051580	GCA_900092115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/115/GCA_900092115.1_42538b	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.59703	57.1	-	FWNP01	60	5691	5336	3/29/17	4/10/17	Scaffold	SC	SAMEA4362665	GCA_900173925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/925/GCA_900173925.1_20925_2_136	-	VRCO0333
Pseudomonas aeruginosa	287	PRJNA327106	327106	Proteobacteria	Gammaproteobacteria	6.83471	65.8	-	MKXZ01	109	-	-	12/22/16	12/22/16	Contig	None	SAMN05509320	GCA_001914085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/085/GCA_001914085.1_ASM191408v1	-	-
Pseudomonas aeruginosa	287	PRJNA308639	308639	Proteobacteria	Gammaproteobacteria	6.87888	66.1	-	LXFB01	261	-	-	3/14/17	3/14/17	Contig	Universidade de Aveiro	SAMN04404361	GCA_002025755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/755/GCA_002025755.1_ASM202575v1	27371958	E67
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.29811	57.5	-	FWNQ01	36	5284	5075	3/29/17	4/3/17	Scaffold	SC	SAMEA4362666	GCA_900173935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/935/GCA_900173935.1_20925_2_137	-	VRCO0195
Streptococcus pneumoniae	1313	PRJEB14268	359421	Terrabacteria group	Firmicutes	2.13104	39.6	-	FLTA01	62	2316	2120	12/30/16	3/14/17	Contig	CEBITEC	SAMEA4051578	GCA_900092125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/125/GCA_900092125.1_38301b	-	-
Escherichia coli O157:H7 str. K6687	1446696	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.57059	50.4	-	JHHV01	205	6191	5596	4/8/14	2/23/17	Contig	CDC	SAMN02353122	GCA_000619425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/425/GCA_000619425.1_EcK6687	25103754	K6687
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38746	65.6	-	MQAL01	12	4259	4098	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010123	GCA_001943805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/805/GCA_001943805.1_ASM194380v1	-	M0016605-9
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183848	183848	Proteobacteria	Gammaproteobacteria	4.90247	52.1	-	LRNN01	84	4998	4696	1/25/16	3/1/17	Contig	Florida Department of Health	SAMN02261199	GCA_001535415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/415/GCA_001535415.1_ASM153541v1	-	CFSAN001368
Staphylococcus aureus DAR3551	1422126	PRJNA228207	228207	Terrabacteria group	Firmicutes	2.93744	32.8	-	JGNW01	5	3076	2906	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403676	GCA_000607425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/425/GCA_000607425.1_Stap_aure_DAR3551_V1	-	DAR3551
Staphylococcus aureus DAR3555	1422127	PRJNA228208	228208	Terrabacteria group	Firmicutes	2.82609	32.9	-	JGNX01	6	2942	2788	3/27/14	3/4/17	Scaffold	Broad Institute	SAMN02403677	GCA_000607445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/445/GCA_000607445.1_Stap_aure_DAR3555_V1	-	DAR3555
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183847	183847	Proteobacteria	Gammaproteobacteria	4.78806	52.2	-	LRNL01	71	4871	4483	1/25/16	3/1/17	Contig	 Arizona State Public Health Laboratory	SAMN02261205	GCA_001535445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/445/GCA_001535445.1_ASM153544v1	-	CFSAN001374
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36433	65.6	-	MQAJ01	14	4261	4090	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010120	GCA_001943815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/815/GCA_001943815.1_ASM194381v1	-	I0003802-1
Escherichia coli O157:H7 str. K5609	1446691	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.33889	50.3	-	JHIA01	99	5733	5296	4/8/14	2/23/17	Contig	CDC	SAMN02353117	GCA_000619445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/445/GCA_000619445.1_EcK5609	25103754	K5609
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.08945	39.6	-	FWTO01	343	2239	2051	4/5/17	4/17/17	Contig	UNIVERSITY OF MANCHESTER	SAMEA3545983	GCA_900170315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/315/GCA_900170315.1_Hermans-1638	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.59171	56.9	-	FWNU01	87	5591	5261	3/29/17	4/3/17	Scaffold	SC	SAMEA4362669	GCA_900173945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/945/GCA_900173945.1_20925_2_140	-	VRCO0309
Pseudomonas aeruginosa	287	PRJNA348797	348797	Proteobacteria	Gammaproteobacteria	4.65491	65.6	-	MWZI01	112	4552	4430	4/12/17	4/12/17	Contig	UQCCR	SAMN05915709	GCA_002088155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/155/GCA_002088155.1_ASM208815v1	-	UQCCR 465184597 AE04
Pseudomonas aeruginosa	287	PRJNA374794	374794	Proteobacteria	Gammaproteobacteria	6.60594	66	-	MVOB01	1286	7030	6297	5/12/17	5/12/17	Contig	Faculdade de Ciencias Farmaceuticas de Ribeirao Preto	SAMN06335545	GCA_002134825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/825/GCA_002134825.1_ASM213482v1	-	HC84
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.56761	56.9	-	FWNS01	97	5545	5225	3/29/17	4/3/17	Scaffold	SC	SAMEA4362671	GCA_900173955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/955/GCA_900173955.1_20925_2_142	-	VRCO0313
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.03197	39.6	-	FWTN01	230	2189	2001	4/5/17	4/17/17	Contig	UNIVERSITY OF MANCHESTER	SAMEA3545945	GCA_900170415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/415/GCA_900170415.1_Hermans-471	-	-
Escherichia coli O111:NM str. K6723	1446534	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.4409	50.3	-	JHHT01	139	5980	5383	4/8/14	2/23/17	Contig	CDC	SAMN02353124	GCA_000619485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/485/GCA_000619485.1_EcK6723	25103754	K6723
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35252	65.6	-	MQAR01	6	4237	4080	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010129	GCA_001943835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/835/GCA_001943835.1_ASM194383v1	-	I0003489-7
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183851	183851	Proteobacteria	Gammaproteobacteria	4.79594	52.1	-	LRNM01	152	4907	4549	1/25/16	3/1/17	Contig	Washington State Department of Health Public Health Laboratory	SAMN02261204	GCA_001535455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/455/GCA_001535455.1_ASM153545v1	-	CFSAN001373
Staphylococcus aureus DAR3562	1422128	PRJNA228209	228209	Terrabacteria group	Firmicutes	2.84767	32.8	-	JGNY01	6	2972	2812	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403678	GCA_000607465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/465/GCA_000607465.1_Stap_aure_DAR3562_V1	-	DAR3562
Staphylococcus aureus DAR3565	1422129	PRJNA228210	228210	Terrabacteria group	Firmicutes	2.85914	32.8	-	JGNZ01	9	2978	2823	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403679	GCA_000607485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/485/GCA_000607485.1_Stap_aure_DAR3565_V1	-	DAR3565
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.78983	52.2	-	LRNK01	103	4886	4433	1/25/16	3/5/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN02261206	GCA_001535485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/485/GCA_001535485.1_ASM153548v1	-	CFSAN001375
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36476	65.6	-	MQAV01	6	4247	4080	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010133	GCA_001943885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/885/GCA_001943885.1_ASM194388v1	-	M0014909-7
Escherichia coli O111:NM str. K6728	1446535	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.30574	50.3	-	JHHS01	149	5823	5274	4/8/14	2/23/17	Contig	CDC	SAMN02353125	GCA_000619505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/505/GCA_000619505.1_EcK6728	25103754	K6728
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.01364	39.7	-	FWVB01	311	2145	1952	4/5/17	4/17/17	Contig	UNIVERSITY OF MANCHESTER	SAMEA3545975	GCA_900171015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/015/GCA_900171015.1_Hermans-1450	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.56123	56.9	-	FWNR01	109	5544	5226	3/29/17	4/3/17	Scaffold	SC	SAMEA4362670	GCA_900173965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/965/GCA_900173965.1_20925_2_141	-	VRCO0311
Pseudomonas aeruginosa	287	PRJNA401921	401921	Proteobacteria	Gammaproteobacteria	6.7175	65.8	-	NTHO01	4447	8733	8457	9/13/17	9/13/17	Contig	University of Sao Paulo	SAMN07611286	GCA_002300535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/535/GCA_002300535.1_ASM230053v1	-	ICBRVIM-2
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	4.49657	65	-	FRJK01	1988	-	-	12/9/16	12/9/16	Contig	DTU	SAMEA2357310	GCA_900144785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/785/GCA_900144785.1_136	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.57757	57.1	-	FWNT01	74	5628	5279	3/29/17	4/3/17	Scaffold	SC	SAMEA4362672	GCA_900173975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/975/GCA_900173975.1_20925_2_143	-	VRCO0315
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.05926	39.5	-	FWQD01	261	2210	2026	4/26/17	5/6/17	Contig	UNIVERSITY OF MANCHESTER	SAMEA3545951	GCA_900171275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/275/GCA_900171275.1_Hermans-781	-	-
Escherichia coli O111:NM str. K6890	1446536	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.41671	50.3	-	JHHR01	195	6011	5396	4/8/14	2/23/17	Contig	CDC	SAMN02353126	GCA_000619525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/525/GCA_000619525.1_EcK6890	25103754	K6890
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35343	65.6	-	MQAY01	4	4238	4077	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010137	GCA_001943895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/895/GCA_001943895.1_ASM194389v1	-	I0004542-2
Salmonella enterica subsp. enterica	59201	PRJNA183851	183851	Proteobacteria	Gammaproteobacteria	4.7829	52.2	-	LRPF01	236	4975	4511	1/27/16	3/1/17	Contig	Washington State Department of Health Public Health Laboratory	SAMN02261200	GCA_001541975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/541/975/GCA_001541975.1_ASM154197v1	-	CFSAN001369
Staphylococcus aureus DAR3567	1422130	PRJNA228211	228211	Terrabacteria group	Firmicutes	2.86895	33	-	JGOA01	9	2999	2828	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403680	GCA_000607505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/505/GCA_000607505.1_Stap_aure_DAR3567_V1	-	DAR3567
Staphylococcus aureus DAR3574	1422131	PRJNA228212	228212	Terrabacteria group	Firmicutes	2.87096	32.8	-	JGOB01	8	3026	2857	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403681	GCA_000607525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/525/GCA_000607525.1_Stap_aure_DAR3574_V1	-	DAR3574
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.93479	51.8	-	LOBI01	365	4910	4666	1/27/16	3/1/17	Contig	FDA/CFSAN	SAMN03275161	GCA_001542055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/055/GCA_001542055.1_ASM154205v1	-	CFSAN011778
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38504	65.6	-	MQBC01	11	4257	4100	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010141	GCA_001943915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/915/GCA_001943915.1_ASM194391v1	-	I0004631-3
Escherichia coli O111:NM str. K6908	1446541	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.38593	50.4	-	JHHM01	154	5897	5332	4/8/14	2/23/17	Contig	CDC	SAMN02353131	GCA_000619605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/605/GCA_000619605.1_EcK6908	25103754	K6908
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.04957	39.5	-	FWRW01	258	2197	2014	4/5/17	4/17/17	Contig	UNIVERSITY OF MANCHESTER	SAMEA3545972	GCA_900171415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/415/GCA_900171415.1_Hermans-1170	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.33893	57.4	-	FWNW01	31	5378	5145	3/29/17	4/3/17	Scaffold	SC	SAMEA4362673	GCA_900173985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/985/GCA_900173985.1_20925_2_144	-	VRCO0470
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	4.9416	65.4	-	FRKC01	1835	-	-	12/9/16	12/9/16	Contig	DTU	SAMEA2357312	GCA_900144795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/795/GCA_900144795.1_137	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	4.9672	65.4	-	FRKH01	1939	-	-	12/9/16	12/9/16	Contig	DTU	SAMEA2357313	GCA_900144805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/805/GCA_900144805.1_138	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.33502	57.4	-	FWNV01	33	5369	5138	3/29/17	4/3/17	Scaffold	SC	SAMEA4362674	GCA_900173995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/173/995/GCA_900173995.1_20925_2_145	-	VRCO0471
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.11226	39.6	-	FWQX01	321	2223	2033	4/5/17	4/17/17	Contig	UNIVERSITY OF MANCHESTER	SAMEA3545940	GCA_900171495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/495/GCA_900171495.1_Hermans-60	-	-
Escherichia coli E1728	1457300	PRJNA236343	236343	Proteobacteria	Gammaproteobacteria	5.26498	50.3	-	JDFV01	170	5475	5130	4/8/14	2/23/17	Contig	The Hong Kong University of Science and Technology	SAMN02678202	GCA_000622265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/265/GCA_000622265.1_CLC_6.5.1_of_E._coli_genome	24812229	E1728
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38057	65.6	-	MQBE01	18	4272	4109	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010143	GCA_001943965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/965/GCA_001943965.1_ASM194396v1	-	I0004105-8
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.87256	52.1	-	LOBF01	202	4882	4643	1/27/16	3/1/17	Contig	FDA/CFSAN	SAMN03275158	GCA_001542065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/065/GCA_001542065.1_ASM154206v1	-	CFSAN011775
Staphylococcus aureus DAR3575	1422132	PRJNA228213	228213	Terrabacteria group	Firmicutes	2.88449	32.8	-	JGOC01	12	3033	2865	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403682	GCA_000607545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/545/GCA_000607545.1_Stap_aure_DAR3575_V1	-	DAR3575
Staphylococcus aureus DAR3576	1422133	PRJNA228214	228214	Terrabacteria group	Firmicutes	2.89167	32.9	-	JGOD01	12	3028	2859	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403683	GCA_000607565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/565/GCA_000607565.1_Stap_aure_DAR3576_V1	-	DAR3576
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.86241	52	-	LOBG01	192	4866	4637	1/27/16	3/1/17	Contig	FDA/CFSAN	SAMN03275159	GCA_001542095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/095/GCA_001542095.1_ASM154209v1	-	CFSAN011776
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37627	65.6	-	MQBL01	23	4265	4102	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010150	GCA_001943985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/985/GCA_001943985.1_ASM194398v1	-	I0001435-2
Escherichia coli E1140	1453472	PRJNA236340	236340	Proteobacteria	Gammaproteobacteria	5.11162	50.8	-	JDFU02	11	5298	4874	4/8/14	2/23/17	Contig	Hong Kong University of Science and Technology	SAMN02678201	GCA_000622285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/285/GCA_000622285.2_ASM62228v2	25291771	E1140
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.09861	39.6	-	FWQC01	377	2273	2056	4/5/17	4/17/17	Contig	UNIVERSITY OF MANCHESTER	SAMEA3545874	GCA_900171515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/515/GCA_900171515.1_Hermans-387	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.33619	57.4	-	FWNX01	38	5375	5135	3/29/17	4/3/17	Scaffold	SC	SAMEA4362675	GCA_900174005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/005/GCA_900174005.1_20925_2_146	-	VRCO0472
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	5.04175	65.4	-	FRKE01	1900	-	-	12/9/16	12/9/16	Contig	DTU	SAMEA2357317	GCA_900144825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/825/GCA_900144825.1_140	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	4.75664	65.2	-	FRKD01	1861	-	-	12/9/16	12/9/16	Contig	DTU	SAMEA2357319	GCA_900144835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/835/GCA_900144835.1_141	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.98649	56.5	-	FWNZ01	146	6038	5588	3/29/17	4/3/17	Scaffold	SC	SAMEA4362680	GCA_900174015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/015/GCA_900174015.1_20925_2_151	-	VRCO0168
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.039	39.6	-	FYFP01	64	2217	2004	6/25/17	7/5/17	Contig	SC	SAMEA1026623	GCA_900188595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/595/GCA_900188595.1_6470_3_7	-	UoS0026
Escherichia coli O26:H11 str. 2011C-3387	1446731	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.38367	50.3	-	JHLV01	156	5911	5368	4/9/14	2/23/17	Contig	CDC	SAMN02353024	GCA_000622815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/815/GCA_000622815.1_Ec2011C-3387	25103754	2011C-3387
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37337	65.6	-	MQBS01	24	4256	4081	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010157	GCA_001944045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/045/GCA_001944045.1_ASM194404v1	-	I0000287-8
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.86887	52.1	-	LOBL01	145	4900	4650	1/27/16	3/1/17	Contig	FDA/CFSAN	SAMN03275164	GCA_001542125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/125/GCA_001542125.1_ASM154212v1	-	CFSAN011781
Staphylococcus aureus DAR3578	1422134	PRJNA228215	228215	Terrabacteria group	Firmicutes	2.87679	32.9	-	JGOE01	25	3010	2844	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403684	GCA_000607585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/585/GCA_000607585.1_Stap_aure_DAR3578_V1	-	DAR3578
Staphylococcus aureus DAR3581	1422135	PRJNA228216	228216	Terrabacteria group	Firmicutes	2.80996	32.9	-	JGOF01	6	2920	2756	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403685	GCA_000607605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/605/GCA_000607605.1_Stap_aure_DAR3581_V1	-	DAR3581
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.89423	52	-	LOBH01	248	4883	4645	1/27/16	3/1/17	Contig	FDA/CFSAN	SAMN03275160	GCA_001542135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/135/GCA_001542135.1_ASM154213v1	-	CFSAN011777
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3904	65.6	-	MQCF01	4	4266	4100	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010170	GCA_001944125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/125/GCA_001944125.1_ASM194412v1	-	M0007584-7
Escherichia coli O26:H11 str. 2011C-3506	1446732	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.35045	50.3	-	JHLS01	200	5860	5332	4/9/14	2/23/17	Contig	CDC	SAMN02353027	GCA_000622835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/835/GCA_000622835.1_Ec2011C-3506	25103754	2011C-3506
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08401	39.6	-	FYFY01	69	2287	2059	6/25/17	7/5/17	Contig	SC	SAMEA1026640	GCA_900188605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/605/GCA_900188605.1_6470_3_22	-	UoS0093
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.6068	57.1	-	FWNY01	188	5660	5292	3/29/17	4/3/17	Scaffold	SC	SAMEA4362677	GCA_900174025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/025/GCA_900174025.1_20925_2_148	-	VRCO0480
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	4.58327	65.1	-	FRKM01	2052	-	-	12/9/16	12/9/16	Contig	DTU	SAMEA2357322	GCA_900144845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/845/GCA_900144845.1_143	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	4.98513	65.4	-	FRJX01	1858	-	-	12/9/16	12/9/16	Contig	DTU	SAMEA2357321	GCA_900144855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/855/GCA_900144855.1_142	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.6647	57.2	-	FWOA01	57	5699	5377	3/29/17	4/3/17	Scaffold	SC	SAMEA4362678	GCA_900174035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/035/GCA_900174035.1_20925_2_149	-	VRCO0486
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09863	39.6	-	FYGL01	78	2339	2096	6/25/17	7/5/17	Contig	SC	SAMEA1026794	GCA_900188635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/635/GCA_900188635.1_6470_3_3	-	UoS0014
Escherichia coli 2-005-03_S4_C3	1444258	PRJNA233915	233915	Proteobacteria	Gammaproteobacteria	5.2466	50.7	-	JJLJ01	241	5765	5163	4/11/14	2/23/17	Contig	IGS	SAMN02687493	GCA_000627075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/075/GCA_000627075.1_ASM62707v1	-	2-005-03_S4_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38881	65.6	-	MQCH01	12	4259	4096	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010173	GCA_001944135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/135/GCA_001944135.1_ASM194413v1	-	I0000304-1
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.92383	51.9	-	LOBJ01	329	4897	4656	1/27/16	3/1/17	Contig	FDA/CFSAN	SAMN03275162	GCA_001542155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/155/GCA_001542155.1_ASM154215v1	-	CFSAN011779
Staphylococcus aureus DAR3583	1422136	PRJNA228217	228217	Terrabacteria group	Firmicutes	2.86342	32.8	-	JGOG01	7	3018	2849	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403686	GCA_000607625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/625/GCA_000607625.1_Stap_aure_DAR3583_V1	-	DAR3583
Staphylococcus aureus DAR3584	1422137	PRJNA228218	228218	Terrabacteria group	Firmicutes	2.86158	32.9	-	JGOH01	9	2986	2824	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403687	GCA_000607645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/645/GCA_000607645.1_Stap_aure_DAR3584_V1	-	DAR3584
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.90125	52	-	LOBK01	259	4907	4655	1/27/16	3/1/17	Contig	FDA/CFSAN	SAMN03275163	GCA_001542175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/175/GCA_001542175.1_ASM154217v1	-	CFSAN011780
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38132	65.6	-	MQCK01	12	4261	4093	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010176	GCA_001944145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/145/GCA_001944145.1_ASM194414v1	-	I0004240-3
Escherichia coli 1-182-04_S4_C3	1444274	PRJNA233931	233931	Proteobacteria	Gammaproteobacteria	5.10029	50.8	-	JJLH01	105	5321	4916	4/11/14	2/23/17	Contig	IGS	SAMN02680104	GCA_000627095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/095/GCA_000627095.1_ASM62709v1	-	1-182-04_S4_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05896	39.6	-	FYGK01	66	2268	2019	6/25/17	7/5/17	Contig	SC	SAMEA1026414	GCA_900188655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/655/GCA_900188655.1_6470_4_14	-	UoS0159
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.62848	57.1	-	FWOB01	47	5653	5360	3/29/17	4/3/17	Scaffold	SC	SAMEA4362679	GCA_900174045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/045/GCA_900174045.1_20925_2_150	-	VRCO0167
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	4.83779	64.6	-	FRKL01	1974	-	-	12/9/16	12/9/16	Contig	DTU	SAMEA2357323	GCA_900144875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/875/GCA_900144875.1_144	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	4.83782	65.3	-	FRKJ01	1866	-	-	12/9/16	12/9/16	Contig	DTU	SAMEA2357325	GCA_900144885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/885/GCA_900144885.1_146	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.64776	57.1	-	FWOD01	44	5660	5396	3/29/17	4/3/17	Scaffold	SC	SAMEA4362681	GCA_900174055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/055/GCA_900174055.1_20925_2_152	-	VRCO0169
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.058	39.6	-	FYFO01	54	2257	2053	6/25/17	7/5/17	Contig	SC	SAMEA1026611	GCA_900188665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/665/GCA_900188665.1_6470_3_5	-	UoS0021
Escherichia coli 1-176-05_S4_C3	1444273	PRJNA233930	233930	Proteobacteria	Gammaproteobacteria	5.1682	50.8	-	JJLI01	194	5594	5033	4/11/14	2/23/17	Contig	IGS	SAMN02680094	GCA_000627135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/135/GCA_000627135.1_ASM62713v1	-	1-176-05_S4_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38972	65.6	-	MQCN01	8	4272	4114	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010179	GCA_001944155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/155/GCA_001944155.1_ASM194415v1	-	I0004509-1
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.85291	52.1	-	LOBM01	124	4890	4643	1/27/16	3/1/17	Contig	FDA/CFSAN	SAMN03275165	GCA_001542215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/542/215/GCA_001542215.1_ASM154221v1	-	CFSAN011782
Staphylococcus aureus DAR3586	1422138	PRJNA228219	228219	Terrabacteria group	Firmicutes	2.85186	32.9	-	JGOI01	7	2991	2822	3/27/14	3/4/17	Scaffold	Broad Institute	SAMN02403688	GCA_000607665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/665/GCA_000607665.1_Stap_aure_DAR3586_V1	-	DAR3586
Staphylococcus aureus DAR3587	1422139	PRJNA228220	228220	Terrabacteria group	Firmicutes	2.90585	32.8	-	JGOJ01	10	3049	2877	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403689	GCA_000607685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/685/GCA_000607685.1_Stap_aure_DAR3587_V1	-	DAR3587
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA305825	305825	Proteobacteria	Gammaproteobacteria	4.6783	52.3	-	LONA01	91	4825	4573	2/11/16	3/1/17	Contig	University of Florida	SAMN04334594	GCA_001559855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/559/855/GCA_001559855.1_ASM155985v1	-	MHM112
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38947	65.6	-	MQCQ01	12	4262	4095	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010182	GCA_001944205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/205/GCA_001944205.1_ASM194420v1	-	I0002815-4
Escherichia coli 1-250-04_S4_C1	1444218	PRJNA233875	233875	Proteobacteria	Gammaproteobacteria	5.22152	50.8	-	JJLO01	161	5625	5057	4/11/14	2/23/17	Contig	IGS	SAMN02680180	GCA_000627155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/155/GCA_000627155.1_ASM62715v1	-	1-250-04_S4_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.12749	39.5	-	FYGS01	90	2325	2080	6/25/17	7/5/17	Contig	SC	SAMEA1026652	GCA_900188675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/675/GCA_900188675.1_6470_3_23	-	UoS0094
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.62232	57.2	-	FWOC01	44	5620	5362	3/29/17	4/3/17	Scaffold	SC	SAMEA4362682	GCA_900174065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/065/GCA_900174065.1_20925_2_153	-	VRCO0170
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	4.48868	65	-	FRKO01	2074	-	-	12/9/16	12/9/16	Contig	DTU	SAMEA2357326	GCA_900144895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/144/895/GCA_900144895.1_147	-	-
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	4.76489	65.2	-	FRUQ01	1912	-	-	12/9/16	12/9/16	Contig	DTU	SAMEA2357311	GCA_900147735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/735/GCA_900147735.1_136_1	-	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.64922	57.1	-	FWOJ01	45	5681	5379	3/29/17	4/3/17	Scaffold	SC	SAMEA4362684	GCA_900174075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/075/GCA_900174075.1_20925_2_155	-	VRCO0172
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.02695	39.6	-	FYGQ01	63	2217	1997	6/25/17	7/5/17	Contig	SC	SAMEA1026647	GCA_900188685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/685/GCA_900188685.1_6470_3_12	-	UoS0050
Escherichia coli 1-182-04_S4_C1	1444217	PRJNA233874	233874	Proteobacteria	Gammaproteobacteria	5.13035	50.7	-	JJLP01	109	5380	4939	4/11/14	2/23/17	Contig	IGS	SAMN02680214	GCA_000627175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/175/GCA_000627175.1_ASM62717v1	-	1-182-04_S4_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34815	65.6	-	MQCT01	6	4233	4070	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010185	GCA_001944215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/215/GCA_001944215.1_ASM194421v1	-	I0005429-1
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.88184	52.2	-	BCNZ01	171	4943	4660	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043356	GCA_001569545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/545/GCA_001569545.1_ASM156954v1	27151793	NGUA01
Staphylococcus aureus DAR3590	1422140	PRJNA228221	228221	Terrabacteria group	Firmicutes	2.90791	32.8	-	JGOK01	8	3046	2876	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403690	GCA_000607705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/705/GCA_000607705.1_Stap_aure_DAR3590_V1	-	DAR3590
Staphylococcus aureus DAR3591	1422141	PRJNA228222	228222	Terrabacteria group	Firmicutes	2.77627	32.8	-	JGOL01	10	2875	2718	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403691	GCA_000607725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/725/GCA_000607725.1_Stap_aure_DAR3591_V1	-	DAR3591
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.87658	52.2	-	BCOA01	141	4940	4657	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043367	GCA_001569565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/565/GCA_001569565.1_ASM156956v1	27151793	NGUA02
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37992	65.6	-	MQCW01	14	4263	4094	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010188	GCA_001944225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/225/GCA_001944225.1_ASM194422v1	-	I0004851-7
Escherichia coli 2-005-03_S4_C2	1444228	PRJNA233885	233885	Proteobacteria	Gammaproteobacteria	5.20077	50.7	-	JJLN01	284	5727	5114	4/11/14	2/23/17	Contig	IGS	SAMN02680209	GCA_000627195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/195/GCA_000627195.1_ASM62719v1	-	2-005-03_S4_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03787	39.5	-	FYFM01	49	2255	2045	6/25/17	7/5/17	Contig	SC	SAMEA1026680	GCA_900188695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/695/GCA_900188695.1_6470_3_10	-	UoS0048
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.85023	57.1	-	FWOG01	52	5877	5588	3/29/17	4/3/17	Scaffold	SC	SAMEA4362683	GCA_900174085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/085/GCA_900174085.1_20925_2_154	-	VRCO0171
Pseudomonas aeruginosa	287	PRJEB5438	263888	Proteobacteria	Gammaproteobacteria	4.90481	65.3	-	FRVD01	1827	-	-	12/9/16	12/9/16	Contig	DTU	SAMEA2357318	GCA_900147765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/147/765/GCA_900147765.1_140_1	-	-
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.14075	65.6	-	LCSQ01	1235	-	-	5/14/15	5/14/15	Scaffold	University of Toronto	SAMN03566235	GCA_001007195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/195/GCA_001007195.1_ASM100719v1	-	Pae_CF67.01g
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.62764	57.1	-	FWOE01	45	5665	5383	3/29/17	5/22/17	Scaffold	SC	SAMEA4362689	GCA_900174095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/095/GCA_900174095.1_20925_2_160	-	VRCO0177
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08307	39.6	-	FYFC01	65	2265	2034	6/25/17	7/5/17	Contig	SC	SAMEA1026467	GCA_900188705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/705/GCA_900188705.1_6470_4_10	-	UoS0152
Escherichia coli 1-182-04_S4_C2	1444245	PRJNA233902	233902	Proteobacteria	Gammaproteobacteria	5.15135	50.8	-	JJLM01	88	5404	4985	4/11/14	2/23/17	Contig	IGS	SAMN02687484	GCA_000627215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/215/GCA_000627215.1_ASM62721v1	-	1-182-04_S4_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39079	65.6	-	MQCZ01	6	4265	4108	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010191	GCA_001944235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/235/GCA_001944235.1_ASM194423v1	-	I0002450-0
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.88732	52.1	-	BCOB01	168	4994	4724	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043378	GCA_001569585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/585/GCA_001569585.1_ASM156958v1	27151793	NGUA03
Staphylococcus aureus DAR3592	1422142	PRJNA228223	228223	Terrabacteria group	Firmicutes	2.86001	32.8	-	JGOM01	9	2998	2837	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403692	GCA_000607745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/745/GCA_000607745.1_Stap_aure_DAR3592_V1	-	DAR3592
Staphylococcus aureus DAR3596	1422143	PRJNA228224	228224	Terrabacteria group	Firmicutes	2.8811	32.9	-	JGON01	5	3019	2852	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403693	GCA_000607765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/765/GCA_000607765.1_Stap_aure_DAR3596_V1	-	DAR3596
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.85378	52.2	-	BCOC01	175	4948	4677	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043381	GCA_001569605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/605/GCA_001569605.1_ASM156960v1	27151793	NGUA04
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38693	65.6	-	MQDD01	3	4264	4101	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010195	GCA_001944285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/285/GCA_001944285.1_ASM194428v1	-	M0022899-0
Escherichia coli 1-250-04_S4_C2	1444246	PRJNA233903	233903	Proteobacteria	Gammaproteobacteria	5.23547	50.8	-	JJLL01	168	5610	5086	4/11/14	2/23/17	Contig	IGS	SAMN02687537	GCA_000627235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/235/GCA_000627235.1_ASM62723v1	-	1-250-04_S4_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.13717	39.7	-	FYGB01	72	2364	2153	6/25/17	7/5/17	Contig	SC	SAMEA1026455	GCA_900188715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/715/GCA_900188715.1_6470_3_17	-	UoS0071
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.64737	57.1	-	FWOF01	48	5665	5391	3/29/17	4/3/17	Scaffold	SC	SAMEA4362690	GCA_900174105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/105/GCA_900174105.1_20925_2_161	-	VRCO0178
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.3494	66.3	-	LCSM01	407	-	-	5/14/15	5/14/15	Scaffold	University of Toronto	SAMN03566231	GCA_001007205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/205/GCA_001007205.1_ASM100720v1	-	Pae_CF67.01c
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.31703	66.1	-	LCSS01	574	-	-	5/14/15	5/14/15	Scaffold	University of Toronto	SAMN03566237	GCA_001007285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/285/GCA_001007285.1_ASM100728v1	-	Pae_CF67.01i
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.82245	57.1	-	FWOH01	51	5825	5519	3/29/17	4/3/17	Scaffold	SC	SAMEA4362691	GCA_900174115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/115/GCA_900174115.1_20925_2_162	-	VRCO0179
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.16364	39.6	-	FYFX01	101	2369	2039	6/25/17	7/5/17	Contig	SC	SAMEA1026772	GCA_900188725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/725/GCA_900188725.1_6470_3_2	-	UoS0011
Escherichia coli 1-392-07_S4_C2	1444247	PRJNA233904	233904	Proteobacteria	Gammaproteobacteria	5.05208	50.8	-	JJLK01	91	5265	4864	4/11/14	2/23/17	Contig	IGS	SAMN02687496	GCA_000627255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/255/GCA_000627255.1_ASM62725v1	-	1-392-07_S4_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39048	65.6	-	MQDA01	11	4263	4098	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010192	GCA_001944295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/295/GCA_001944295.1_ASM194429v1	-	I0005691-6
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.70731	52.2	-	BCOD01	130	4773	4496	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043382	GCA_001569625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/625/GCA_001569625.1_ASM156962v1	27151793	NGUA05
Staphylococcus aureus DAR3599	1422144	PRJNA228225	228225	Terrabacteria group	Firmicutes	2.90326	32.8	-	JGOO01	11	3049	2887	3/27/14	3/4/17	Scaffold	Broad Institute	SAMN02403694	GCA_000607785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/785/GCA_000607785.1_Stap_aure_DAR3599_V1	-	DAR3599
Staphylococcus aureus DAR3608	1422145	PRJNA228226	228226	Terrabacteria group	Firmicutes	2.85975	32.8	-	JGOP01	35	3014	2846	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403695	GCA_000607805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/805/GCA_000607805.1_Stap_aure_DAR3608_V1	-	DAR3608
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.68095	52.2	-	BCOE01	125	4722	4436	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043383	GCA_001569645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/645/GCA_001569645.1_ASM156964v1	27151793	NGUA06
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36032	65.6	-	MQDH01	11	4258	4089	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010199	GCA_001944325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/325/GCA_001944325.1_ASM194432v1	-	I0004826-9
Escherichia coli 1-392-07_S3_C3	1444192	PRJNA233849	233849	Proteobacteria	Gammaproteobacteria	4.92297	50.9	-	JJLR01	222	5402	4693	4/11/14	2/23/17	Contig	IGS	SAMN02687478	GCA_000627295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/295/GCA_000627295.1_ASM62729v1	-	1-392-07_S3_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.04779	39.5	-	FYFD01	67	2226	2008	6/25/17	7/5/17	Contig	SC	SAMEA1026736	GCA_900188735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/735/GCA_900188735.1_6470_4_12	-	UoS0155
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.65304	57.1	-	FWOL01	49	5673	5375	3/29/17	4/3/17	Scaffold	SC	SAMEA4362686	GCA_900174125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/125/GCA_900174125.1_20925_2_157	-	VRCO0174
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.34244	66.3	-	LCSR01	455	-	-	5/14/15	5/14/15	Scaffold	University of Toronto	SAMN03566236	GCA_001007345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/345/GCA_001007345.1_ASM100734v1	-	Pae_CF67.01h
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.12106	65.4	-	LCST01	1366	-	-	5/14/15	5/14/15	Scaffold	University of Toronto	SAMN03566238	GCA_001007385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/385/GCA_001007385.1_ASM100738v1	-	Pae_CF67.01j
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.62452	57.1	-	FWOS01	47	5653	5340	3/29/17	4/3/17	Scaffold	SC	SAMEA4362688	GCA_900174135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/135/GCA_900174135.1_20925_2_159	-	VRCO0176
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.11816	39.6	-	FYFG01	70	2340	2093	6/25/17	7/5/17	Contig	SC	SAMEA1026529	GCA_900188745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/745/GCA_900188745.1_6470_4_6	-	UoS0138
Escherichia coli 1-176-05_S4_C1	1444216	PRJNA233873	233873	Proteobacteria	Gammaproteobacteria	5.17995	50.8	-	JJLQ01	180	5597	5012	4/11/14	2/23/17	Contig	IGS	SAMN02687502	GCA_000627315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/315/GCA_000627315.1_ASM62731v1	-	1-176-05_S4_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38473	65.6	-	MQDE01	16	4262	4094	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010196	GCA_001944335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/335/GCA_001944335.1_ASM194433v1	-	I0003715-5
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.9502	52.1	-	BCOF01	267	4990	4697	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043384	GCA_001569665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/665/GCA_001569665.1_ASM156966v1	27151793	NGUA07
Staphylococcus aureus DAR3609	1422146	PRJNA228227	228227	Terrabacteria group	Firmicutes	2.92857	32.9	-	JGOQ01	36	3083	2903	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403696	GCA_000607825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/825/GCA_000607825.1_Stap_aure_DAR3609_V1	-	DAR3609
Staphylococcus aureus DAR3612	1422147	PRJNA228228	228228	Terrabacteria group	Firmicutes	2.89654	32.9	-	JGOR01	15	3037	2869	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403697	GCA_000607845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/845/GCA_000607845.1_Stap_aure_DAR3612_V1	-	DAR3612
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.72327	52.2	-	BCOG01	178	4757	4471	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043385	GCA_001569685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/685/GCA_001569685.1_ASM156968v1	27151793	NGUA08
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37934	65.6	-	MQDK01	6	4258	4093	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010202	GCA_001944365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/365/GCA_001944365.1_ASM194436v1	-	I0004722-0
Escherichia coli 1-250-04_S3_C1	1444135	PRJNA233792	233792	Proteobacteria	Gammaproteobacteria	5.09812	50.9	-	JJLU01	203	5531	4864	4/11/14	2/23/17	Contig	IGS	SAMN02680253	GCA_000627435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/435/GCA_000627435.1_ASM62743v1	-	1-250-04_S3_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10382	39.5	-	FYFS01	61	2326	2103	6/25/17	7/5/17	Contig	SC	SAMEA1026569	GCA_900188755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/755/GCA_900188755.1_6470_3_18	-	UoS0075
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.65452	57.1	-	FWON01	43	5689	5384	3/29/17	4/3/17	Scaffold	SC	SAMEA4362687	GCA_900174145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/145/GCA_900174145.1_20925_2_158	-	VRCO0175
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.30308	66.1	-	LCSP01	689	-	-	5/14/15	5/14/15	Scaffold	University of Toronto	SAMN03566234	GCA_001007465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/465/GCA_001007465.1_ASM100746v1	-	Pae_CF67.01f
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.2858	66	-	LCSN01	736	-	-	5/14/15	5/14/15	Scaffold	University of Toronto	SAMN03566232	GCA_001007485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/007/485/GCA_001007485.1_ASM100748v1	-	Pae_CF67.01d
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.67525	57.1	-	FWOK01	59	5705	5425	3/29/17	4/3/17	Scaffold	SC	SAMEA4362685	GCA_900174155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/155/GCA_900174155.1_20925_2_156	-	VRCO0173
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09726	39.5	-	FYFK01	56	2307	2090	6/25/17	7/5/17	Contig	SC	SAMEA1026440	GCA_900188765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/765/GCA_900188765.1_6470_3_16	-	UoS0068
Escherichia coli 1-182-04_S3_C2	1444162	PRJNA233819	233819	Proteobacteria	Gammaproteobacteria	4.58147	50.9	-	JJLT01	261	5058	4275	4/11/14	2/23/17	Contig	IGS	SAMN02680219	GCA_000627455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/455/GCA_000627455.1_ASM62745v1	-	1-182-04_S3_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3939	65.6	-	MQDN01	27	4283	4107	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010205	GCA_001944375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/375/GCA_001944375.1_ASM194437v1	-	I0004290-8
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.82817	52.2	-	BCOH01	137	4950	4671	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043386	GCA_001569705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/705/GCA_001569705.1_ASM156970v1	27151793	NGUA09
Staphylococcus aureus DAR3613	1422148	PRJNA228229	228229	Terrabacteria group	Firmicutes	2.95166	33	-	JGOS01	13	3118	2941	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403698	GCA_000607865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/865/GCA_000607865.1_Stap_aure_DAR3613_V1	-	DAR3613
Staphylococcus aureus DAR3616	1422149	PRJNA228230	228230	Terrabacteria group	Firmicutes	2.93152	32.9	-	JGOT01	21	3093	2916	3/27/14	3/4/17	Scaffold	Broad Institute	SAMN02403699	GCA_000607885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/885/GCA_000607885.1_Stap_aure_DAR3616_V1	-	DAR3616
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	5.05987	52	-	BCOI01	435	5117	4822	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043346	GCA_001569725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/725/GCA_001569725.1_ASM156972v1	27151793	NGUA10
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39197	65.6	-	MQDR01	9	4264	4104	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010209	GCA_001944405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/405/GCA_001944405.1_ASM194440v1	-	I0000686-1
Escherichia coli 1-182-04_S3_C3	1444191	PRJNA233848	233848	Proteobacteria	Gammaproteobacteria	5.17915	50.8	-	JJLS01	306	5708	4798	4/11/14	2/23/17	Contig	IGS	SAMN02680162	GCA_000627475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/475/GCA_000627475.1_ASM62747v1	-	1-182-04_S3_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10685	39.6	-	FYGJ01	86	2334	2090	6/25/17	7/5/17	Contig	SC	SAMEA1026659	GCA_900188795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/795/GCA_900188795.1_6470_3_24	-	UoS0095
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.58373	57.4	-	FWOX01	29	5564	5327	3/29/17	4/3/17	Scaffold	SC	SAMEA4362694	GCA_900174165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/165/GCA_900174165.1_20925_2_165	-	VRCO0243
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.37705	66.3	-	LCUS01	231	-	-	5/19/15	5/19/15	Scaffold	University of Toronto	SAMN03566249	GCA_001010525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/525/GCA_001010525.1_ASM101052v1	-	Pae_CF67.02b
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.21303	65.5	-	LEJF01	1020	-	-	6/22/15	6/22/15	Scaffold	University of Toronto	SAMN03566445	GCA_001036315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/036/315/GCA_001036315.1_ASM103631v1	-	Pae_CF67.12b
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.5847	57.4	-	FWOP01	27	5565	5333	3/29/17	4/3/17	Scaffold	SC	SAMEA4362693	GCA_900174175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/175/GCA_900174175.1_20925_2_164	-	VRCO0242
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.00638	39.7	-	FYFV01	57	2217	2009	6/25/17	7/5/17	Contig	SC	SAMEA1026552	GCA_900188815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/815/GCA_900188815.1_6470_3_19	-	UoS0080
Escherichia coli 1-182-04_S1_C3	1444106	PRJNA233763	233763	Proteobacteria	Gammaproteobacteria	5.04428	50.6	-	JJLX01	89	5371	4906	4/11/14	2/23/17	Contig	IGS	SAMN02680146	GCA_000627795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/795/GCA_000627795.1_ASM62779v1	-	1-182-04_S1_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38331	65.6	-	MQDO01	7	4263	4099	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010206	GCA_001944415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/415/GCA_001944415.1_ASM194441v1	-	I0005227-9
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.93863	52.1	-	BCOJ01	587	4988	4634	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043347	GCA_001569745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/745/GCA_001569745.1_ASM156974v1	27151793	NGUA11
Staphylococcus aureus DAR3617	1422150	PRJNA228231	228231	Terrabacteria group	Firmicutes	2.93779	32.9	-	JGOU01	21	3118	2951	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403700	GCA_000607905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/905/GCA_000607905.1_Stap_aure_DAR3617_V1	-	DAR3617
Staphylococcus aureus DAR3624	1422151	PRJNA228232	228232	Terrabacteria group	Firmicutes	2.79776	32.9	-	JGOV01	11	2905	2748	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403701	GCA_000607925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/925/GCA_000607925.1_Stap_aure_DAR3624_V1	-	DAR3624
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.68908	52.2	-	BCOK01	126	4728	4442	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043348	GCA_001569765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/765/GCA_001569765.1_ASM156976v1	27151793	NGUA12
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38578	65.6	-	MQDV01	14	4273	4099	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010213	GCA_001944455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/455/GCA_001944455.1_ASM194445v1	-	I0000003-9
Escherichia coli 1-250-04_S1_C3	1444107	PRJNA233764	233764	Proteobacteria	Gammaproteobacteria	5.09553	50.6	-	JJLW01	169	5350	4890	4/11/14	2/23/17	Contig	IGS	SAMN02680163	GCA_000627815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/815/GCA_000627815.1_ASM62781v1	-	1-250-04_S1_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.1204	39.6	-	FYFW01	70	2334	2105	6/25/17	7/5/17	Contig	SC	SAMEA1026508	GCA_900188825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/825/GCA_900188825.1_6470_3_21	-	UoS0082
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.57627	56.9	-	FWOQ01	78	5629	5334	3/29/17	4/3/17	Scaffold	SC	SAMEA4362698	GCA_900174185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/185/GCA_900174185.1_20925_2_169	-	VRCO0435
Pseudomonas aeruginosa	287	PRJNA282164	282164	Proteobacteria	Gammaproteobacteria	6.33833	66.1	-	LEGL01	437	-	-	6/22/15	6/22/15	Scaffold	University of Toronto	SAMN03566365	GCA_001037425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/037/425/GCA_001037425.1_ASM103742v1	-	Pae_CF67.08a
Pseudomonas aeruginosa	287	PRJNA307217	307217	Proteobacteria	Gammaproteobacteria	7.02255	65.6	-	LQBU01	190	6697	4380	1/25/16	4/6/16	Scaffold	Sri Sathya Sai Institute of Higher Learning	SAMN04376918	GCA_001535675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/675/GCA_001535675.1_ASM153567v1	27013045	SPA01
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.57749	57.1	-	FWOT01	68	5617	5284	3/29/17	4/3/17	Scaffold	SC	SAMEA4362696	GCA_900174195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/195/GCA_900174195.1_20925_2_167	-	VRCO0314
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.11953	39.6	-	FYFU01	60	2328	2091	6/25/17	7/5/17	Contig	SC	SAMEA1026355	GCA_900188845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/845/GCA_900188845.1_6470_4_5	-	UoS0136
Escherichia coli 2-005-03_S1_C1	1444036	PRJNA233693	233693	Proteobacteria	Gammaproteobacteria	5.2533	50.6	-	JJME01	154	5627	5063	4/11/14	2/23/17	Contig	IGS	SAMN02680248	GCA_000627835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/835/GCA_000627835.1_ASM62783v1	-	2-005-03_S1_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38218	65.6	-	MQDW01	8	4260	4096	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010214	GCA_001944465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/465/GCA_001944465.1_ASM194446v1	-	I0003603-3
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.87266	52.1	-	BCOL01	127	5006	4730	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043349	GCA_001569785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/785/GCA_001569785.1_ASM156978v1	27151793	NGUA13
Staphylococcus aureus DAR3627	1422152	PRJNA228233	228233	Terrabacteria group	Firmicutes	2.88853	32.8	-	JGOW01	9	3029	2856	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403702	GCA_000607945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/945/GCA_000607945.1_Stap_aure_DAR3627_V1	-	DAR3627
Staphylococcus aureus DAR3628	1422153	PRJNA228234	228234	Terrabacteria group	Firmicutes	2.85331	32.8	-	JGOX01	10	2973	2814	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403703	GCA_000607965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/965/GCA_000607965.1_Stap_aure_DAR3628_V1	-	DAR3628
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.53619	52.3	-	BCOM01	98	4609	4347	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043350	GCA_001569805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/805/GCA_001569805.1_ASM156980v1	27151793	NGUA14
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39393	65.6	-	MQDX01	13	4275	4111	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010215	GCA_001944485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/485/GCA_001944485.1_ASM194448v1	-	I0000236-5
Escherichia coli 1-182-04_S1_C1	1444051	PRJNA233708	233708	Proteobacteria	Gammaproteobacteria	5.11766	50.6	-	JJMD01	89	5442	4984	4/11/14	2/23/17	Contig	IGS	SAMN02687517	GCA_000627855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/855/GCA_000627855.1_ASM62785v1	-	1-182-04_S1_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.04217	39.8	-	FYFF01	75	2245	2037	6/25/17	7/5/17	Contig	SC	SAMEA1026600	GCA_900188855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/855/GCA_900188855.1_6470_3_9	-	UoS0041
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.28458	57.3	-	FWOR01	30	5224	5016	3/29/17	4/3/17	Scaffold	SC	SAMEA4362699	GCA_900174205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/205/GCA_900174205.1_20925_2_170	-	VRCO0450
Pseudomonas aeruginosa	287	PRJNA343860	343860	Proteobacteria	Gammaproteobacteria	4.92334	64.5	-	MORA01	4504	4436	3084	1/9/17	1/9/17	Scaffold	Central Research Institute for Dryland Agriculture	SAMN05804735	GCA_001939265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/265/GCA_001939265.1_ASM193926v1	-	P59
Pseudomonas aeruginosa	287	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	6.18805	66.6	-	DBEK01	84	-	-	9/12/17	9/15/17	Scaffold	University of Queensland	SAMN06453949	GCA_002293995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/293/995/GCA_002293995.1_ASM229399v1	28894102	-
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.43238	57.4	-	FWOO01	47	5483	5220	3/29/17	4/3/17	Scaffold	SC	SAMEA4362700	GCA_900174215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/215/GCA_900174215.1_20925_2_171	-	VRCO0341
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06645	39.6	-	FYFN01	87	2281	2056	6/25/17	7/5/17	Contig	SC	SAMEA1026700	GCA_900188875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/875/GCA_900188875.1_6470_3_11	-	UoS0049
Escherichia coli 2-011-08_S1_C2	1444065	PRJNA233722	233722	Proteobacteria	Gammaproteobacteria	5.27875	50.6	-	JJMB01	146	5549	5046	4/11/14	2/23/17	Contig	IGS	SAMN02680264	GCA_000627885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/885/GCA_000627885.1_ASM62788v1	-	2-011-08_S1_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37408	65.6	-	MQDZ01	10	4268	4109	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010217	GCA_001944525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/525/GCA_001944525.1_ASM194452v1	-	I0003525-8
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	5.31306	51.8	-	BCON01	1209	5578	4893	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043351	GCA_001569825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/825/GCA_001569825.1_ASM156982v1	27151793	NGUA15
Staphylococcus aureus DAR3629	1422154	PRJNA228236	228236	Terrabacteria group	Firmicutes	2.79824	32.8	-	JGOY01	7	2887	2724	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403704	GCA_000607985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/607/985/GCA_000607985.1_Stap_aure_DAR3629_V1	-	DAR3629
Staphylococcus aureus DAR3632	1422155	PRJNA228237	228237	Terrabacteria group	Firmicutes	2.81	32.8	-	JGOZ01	11	2929	2764	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403705	GCA_000608005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/005/GCA_000608005.1_Stap_aure_DAR3632_V1	-	DAR3632
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.97035	52.1	-	BCOO01	132	5072	4773	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043352	GCA_001569845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/845/GCA_001569845.1_ASM156984v1	27151793	NGUA16
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39112	65.6	-	MQDY01	13	4282	4093	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010216	GCA_001944535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/535/GCA_001944535.1_ASM194453v1	-	I0004913-5
Escherichia coli 1-176-05_S1_C2	1444078	PRJNA233735	233735	Proteobacteria	Gammaproteobacteria	5.15032	50.8	-	JJMA01	171	5338	4854	4/11/14	2/23/17	Contig	IGS	SAMN02680133	GCA_000627905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/905/GCA_000627905.1_ASM62790v1	-	1-176-05_S1_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06449	39.6	-	FYFH01	53	2266	2032	6/25/17	7/5/17	Contig	SC	SAMEA1026320	GCA_900188905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/905/GCA_900188905.1_6470_4_2	-	UoS0110
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.59757	56.9	-	FWOI01	75	5652	5350	3/29/17	4/3/17	Scaffold	SC	SAMEA4362697	GCA_900174225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/225/GCA_900174225.1_20925_2_168	-	VRCO0434
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.30394	57.5	-	FWOV01	35	5298	5078	3/29/17	4/3/17	Scaffold	SC	SAMEA4362695	GCA_900174235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/235/GCA_900174235.1_20925_2_166	-	VRCO0291
Pseudomonas aeruginosa	287	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	6.29354	66.5	-	DFUD01	30	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06455644	GCA_002379565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/565/GCA_002379565.1_ASM237956v1	28894102	-
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.12702	39.4	-	FYGG01	63	2314	2084	6/25/17	7/5/17	Contig	SC	SAMEA1026555	GCA_900188935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/935/GCA_900188935.1_6470_4_9	-	UoS0145
Escherichia coli 2-005-03_S1_C3	1444092	PRJNA233749	233749	Proteobacteria	Gammaproteobacteria	5.2719	50.6	-	JJLZ01	166	5665	5101	4/11/14	2/23/17	Contig	IGS	SAMN02680169	GCA_000627925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/925/GCA_000627925.1_ASM62792v1	-	2-005-03_S1_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39004	65.6	-	MQEA01	16	4260	4095	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010218	GCA_001944545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/545/GCA_001944545.1_ASM194454v1	-	I0005324-4
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.68772	52.2	-	BCOP01	128	4733	4444	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043353	GCA_001569865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/865/GCA_001569865.1_ASM156986v1	27151793	NGUA17
Staphylococcus aureus DAR3752	1422156	PRJNA228239	228239	Terrabacteria group	Firmicutes	2.86669	32.8	-	JGPA01	9	3012	2853	3/27/14	3/4/17	Scaffold	Broad Institute	SAMN02403706	GCA_000608025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/025/GCA_000608025.1_Stap_aure_DAR3752_V1	-	DAR3752
Staphylococcus aureus DAR3758	1422157	PRJNA228240	228240	Terrabacteria group	Firmicutes	2.83788	32.8	-	JGPB01	17	2956	2803	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403707	GCA_000608045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/045/GCA_000608045.1_Stap_aure_DAR3758_V1	-	DAR3758
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	5.25928	52	-	BCOQ01	585	5306	4933	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043354	GCA_001569885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/885/GCA_001569885.1_ASM156988v1	27151793	NGUA18
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36489	65.6	-	MQED01	11	4241	4071	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010221	GCA_001944605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/605/GCA_001944605.1_ASM194460v1	-	I0000846-1
Escherichia coli 1-176-05_S1_C3	1444105	PRJNA233762	233762	Proteobacteria	Gammaproteobacteria	5.17822	50.9	-	JJLY01	157	5433	4894	4/11/14	2/23/17	Contig	IGS	SAMN02687501	GCA_000627945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/945/GCA_000627945.1_ASM62794v1	-	1-176-05_S1_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08542	39.6	-	FYGC01	58	2282	2048	6/25/17	7/5/17	Contig	SC	SAMEA1026575	GCA_900188955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/955/GCA_900188955.1_6470_3_8	-	UoS0038
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.30292	57.3	-	FWOW01	23	5244	5049	3/29/17	4/3/17	Scaffold	SC	SAMEA4362702	GCA_900174245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/245/GCA_900174245.1_20925_2_173	-	VRCO0363
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.79134	56.8	-	FWOM01	119	5889	5541	3/29/17	4/3/17	Scaffold	SC	SAMEA4362701	GCA_900174255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/255/GCA_900174255.1_20925_2_172	-	VRCO0359
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.0594	39.6	-	FYGI01	49	2264	2024	6/25/17	7/5/17	Contig	SC	SAMEA1026568	GCA_900188975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/975/GCA_900188975.1_6470_4_8	-	UoS0141
Escherichia coli 1-182-04_S3_C1	1444134	PRJNA233791	233791	Proteobacteria	Gammaproteobacteria	5.13583	50.8	-	JJLV01	306	5636	4734	4/11/14	2/23/17	Contig	IGS	SAMN02687483	GCA_000627965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/965/GCA_000627965.1_ASM62796v1	-	1-182-04_S3_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39802	65.6	-	MQEC01	15	4268	4116	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010220	GCA_001944615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/615/GCA_001944615.1_ASM194461v1	-	I0001355-2
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.72168	52.2	-	BCOR01	109	4778	4491	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043355	GCA_001569905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/905/GCA_001569905.1_ASM156990v1	27151793	NGUA19
Staphylococcus aureus DAR3760	1422158	PRJNA228241	228241	Terrabacteria group	Firmicutes	2.90709	32.9	-	JGPC01	5	3070	2903	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403708	GCA_000608065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/065/GCA_000608065.1_Stap_aure_DAR3760_V1	-	DAR3760
Staphylococcus aureus DAR3761	1422159	PRJNA228242	228242	Terrabacteria group	Firmicutes	2.90849	33.1	-	JGPD01	12	3042	2876	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403709	GCA_000608085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/085/GCA_000608085.1_Stap_aure_DAR3761_V1	-	DAR3761
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.87194	52.2	-	BCOS01	183	4940	4653	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043357	GCA_001569925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/925/GCA_001569925.1_ASM156992v1	27151793	NGUA20
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38001	65.6	-	MQEE01	11	4268	4091	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010222	GCA_001944625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/625/GCA_001944625.1_ASM194462v1	-	I0001323-0
Escherichia coli 2-005-03_S1_C2	1444064	PRJNA233721	233721	Proteobacteria	Gammaproteobacteria	5.2588	50.5	-	JJMC01	155	5640	5081	4/11/14	2/23/17	Contig	IGS	SAMN02680149	GCA_000627985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/985/GCA_000627985.1_ASM62798v1	-	2-005-03_S1_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07037	39.6	-	FYFQ01	56	2291	2060	6/25/17	7/5/17	Contig	SC	SAMEA1026460	GCA_900188995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/995/GCA_900188995.1_6470_3_15	-	UoS0064
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.596	56.9	-	FWOY01	79	5671	5341	3/29/17	4/3/17	Scaffold	SC	SAMEA4362704	GCA_900174265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/265/GCA_900174265.1_20925_2_175	-	VRCO0423
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.60083	56.8	-	FWPA01	66	5677	5352	3/29/17	4/3/17	Scaffold	SC	SAMEA4362705	GCA_900174275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/275/GCA_900174275.1_20925_2_176	-	VRCO0424
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.12259	39.6	-	FYGN01	54	2341	2125	6/25/17	7/5/17	Contig	SC	SAMEA1026811	GCA_900189005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/005/GCA_900189005.1_6470_3_4	-	UoS0015
Escherichia coli O157: str. 2010EL-2044	1446606	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.31358	50.3	-	JHME01	111	5700	5274	4/15/14	2/23/17	Contig	CDC	SAMN02353013	GCA_000632555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/555/GCA_000632555.1_Ec2010EL-2044	25103754	2010EL-2044
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37636	65.6	-	MQEF01	10	4260	4099	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010223	GCA_001944635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/635/GCA_001944635.1_ASM194463v1	-	I0002256-1
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.94723	52.1	-	BCOT01	189	5033	4731	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043358	GCA_001569945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/945/GCA_001569945.1_ASM156994v1	27151793	NGUA21
Staphylococcus aureus DAR3762	1422160	PRJNA228243	228243	Terrabacteria group	Firmicutes	2.8619	32.9	-	JGPE01	9	3009	2852	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403710	GCA_000608105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/105/GCA_000608105.1_Stap_aure_DAR3762_V1	-	DAR3762
Staphylococcus aureus DAR3765	1422161	PRJNA228244	228244	Terrabacteria group	Firmicutes	2.7954	32.8	-	JGPF01	9	2894	2733	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403711	GCA_000608125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/125/GCA_000608125.1_Stap_aure_DAR3765_V1	-	DAR3765
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.80162	52.1	-	BCOU01	94	4919	4646	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043359	GCA_001569965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/965/GCA_001569965.1_ASM156996v1	27151793	NGUA22
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37066	65.6	-	MQEH01	10	4248	4087	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010225	GCA_001944685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/685/GCA_001944685.1_ASM194468v1	-	M0008507-7
Escherichia coli O157: str. 2010EL-2045	1446607	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.31943	50.2	-	JHMD01	101	5712	5257	4/15/14	2/23/17	Contig	CDC	SAMN02353014	GCA_000632655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/632/655/GCA_000632655.1_Ec2010EL-2045	25103754	2010EL-2045
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03749	39.6	-	FYGM01	70	2245	1984	6/25/17	7/5/17	Contig	SC	SAMEA1026393	GCA_900189025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/025/GCA_900189025.1_6470_4_17	-	UoS0165
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.60056	56.8	-	FWPB01	80	5676	5348	3/29/17	4/3/17	Scaffold	SC	SAMEA4362706	GCA_900174285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/285/GCA_900174285.1_20925_2_177	-	VRCO0425
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.28101	57.3	-	FWPC01	25	5247	5032	3/29/17	6/9/17	Scaffold	SC	SAMEA4362708	GCA_900174295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/295/GCA_900174295.1_20925_2_179	-	VRCO0451
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.04978	39.5	-	FYGO01	70	2232	1967	6/25/17	7/5/17	Contig	SC	SAMEA1026816	GCA_900189095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/095/GCA_900189095.1_6470_4_21	-	UoS0175
Escherichia coli STEC O174:H2 str. 02-04446	1314845	PRJNA196108	196108	Proteobacteria	Gammaproteobacteria	5.08418	50.7	-	AQGP01	235	5389	5053	4/23/14	2/23/17	Contig	University Hospital Muenster	SAMN02732278	GCA_000647455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/455/GCA_000647455.1_02-04446_clc_bio_denovo	24034719	02-04446
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39508	65.6	-	MQEG01	8	4264	4104	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010224	GCA_001944695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/695/GCA_001944695.1_ASM194469v1	-	I0001560-7
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.97549	52.2	-	BCOV01	216	5049	4751	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043360	GCA_001569985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/569/985/GCA_001569985.1_ASM156998v1	27151793	NGUA23
Staphylococcus aureus DAR3767	1422162	PRJNA228245	228245	Terrabacteria group	Firmicutes	2.90094	32.9	-	JGPG01	13	3050	2883	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403712	GCA_000608145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/145/GCA_000608145.1_Stap_aure_DAR3767_V1	-	DAR3767
Staphylococcus aureus DAR3772	1422164	PRJNA228247	228247	Terrabacteria group	Firmicutes	2.90791	32.9	-	JGPH01	17	3068	2893	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403714	GCA_000608165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/165/GCA_000608165.1_Stap_aure_DAR3772_V1	-	DAR3772
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.8475	52.1	-	BCOW01	113	4982	4704	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043361	GCA_001570005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/005/GCA_001570005.1_ASM157000v1	27151793	NGUA24
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3828	65.6	-	MQEJ01	11	4257	4099	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010227	GCA_001944705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/705/GCA_001944705.1_ASM194470v1	-	I0001284-4
Escherichia coli STEC O174:H46 str. I-151	1314848	PRJNA196110	196110	Proteobacteria	Gammaproteobacteria	5.13865	50.5	-	AQGO01	187	5185	4896	4/23/14	2/23/17	Contig	University Hospital Muenster	SAMN02732277	GCA_000647475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/475/GCA_000647475.1_I-151_clc_bio_denovo	24034719	I-151
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09374	39.5	-	FYGT01	64	2297	2074	6/25/17	7/5/17	Contig	SC	SAMEA1026798	GCA_900189105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/105/GCA_900189105.1_6470_4_23	-	UoS0194
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.59805	56.9	-	FWOZ01	79	5662	5345	3/29/17	4/3/17	Scaffold	SC	SAMEA4362707	GCA_900174305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/305/GCA_900174305.1_20925_2_178	-	VRCO0432
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.30976	57.5	-	FWPG01	43	5313	5076	3/29/17	4/3/17	Scaffold	SC	SAMEA4362703	GCA_900174315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/315/GCA_900174315.1_20925_2_174	-	VRCO0392
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08138	39.6	-	FYGW01	82	2325	2066	6/25/17	7/5/17	Contig	SC	SAMEA1026812	GCA_900189115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/115/GCA_900189115.1_6470_4_24	-	UoS0196
Escherichia coli STEC O174:H8 str. 02-07607	1314847	PRJNA196109	196109	Proteobacteria	Gammaproteobacteria	5.26439	50.6	-	AQGN01	316	5515	5147	4/23/14	2/23/17	Contig	University Hospital Muenster	SAMN02732276	GCA_000647495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/495/GCA_000647495.1_02-07607_clc_bio_denovo	24034719	02-07607
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38942	65.6	-	MQEI01	5	4260	4095	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010226	GCA_001944715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/715/GCA_001944715.1_ASM194471v1	-	I0001650-6
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.70242	52.2	-	BCOX01	166	4729	4451	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043362	GCA_001570025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/025/GCA_001570025.1_ASM157002v1	27151793	NGUA25
Staphylococcus aureus DAR3776	1422165	PRJNA228248	228248	Terrabacteria group	Firmicutes	2.89993	32.7	-	JGPI01	14	3054	2883	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403715	GCA_000608185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/185/GCA_000608185.1_Stap_aure_DAR3776_V1	-	DAR3776
Staphylococcus aureus DAR3779	1422166	PRJNA228249	228249	Terrabacteria group	Firmicutes	2.89898	32.9	-	JGPJ01	13	3041	2874	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403716	GCA_000608205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/205/GCA_000608205.1_Stap_aure_DAR3779_V1	-	DAR3779
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.78383	52.1	-	BCOY01	140	4792	4519	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043363	GCA_001570045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/045/GCA_001570045.1_ASM157004v1	27151793	NGUA26
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34335	65.6	-	MQEL01	12	4237	4077	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010229	GCA_001944765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/765/GCA_001944765.1_ASM194476v1	-	I0000492-4
Escherichia coli O174:H21	1268668	PRJNA183614	183614	Proteobacteria	Gammaproteobacteria	4.98033	50.8	-	APWX01	288	5225	4906	4/23/14	2/23/17	Contig	University Hospital Muenster	SAMN02732275	GCA_000647515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/515/GCA_000647515.1_220_00_clc_bio_denovo	24034719	220/00
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08479	39.6	-	FYGX01	58	2289	2050	6/25/17	7/5/17	Contig	SC	SAMEA1026760	GCA_900189125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/125/GCA_900189125.1_6470_5_1	-	UoS0205
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.11714	58.1	-	FWOU01	17	5077	4840	3/29/17	4/3/17	Scaffold	SC	SAMEA4362709	GCA_900174325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/325/GCA_900174325.1_20925_2_180	-	VRCO0463
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.3034	57.5	-	FWPF01	43	5303	5070	3/29/17	4/3/17	Scaffold	SC	SAMEA4362711	GCA_900174335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/335/GCA_900174335.1_20925_2_182	-	VRCO0293
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03169	39.6	-	FYHE01	74	2226	1980	6/25/17	7/5/17	Contig	SC	SAMEA1026742	GCA_900189135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/135/GCA_900189135.1_6470_5_2	-	UoS0207
Escherichia coli	562	PRJNA237732	237732	Proteobacteria	Gammaproteobacteria	4.58771	50.9	-	JEND02	6	4686	4313	4/23/14	2/23/17	Contig	The Hong Kong University of Science and Technology	SAMN02640259	GCA_000647795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/795/GCA_000647795.2_ASM64779v2	25291771	E455
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38301	65.6	-	MQEK01	8	4265	4101	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010228	GCA_001944795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/795/GCA_001944795.1_ASM194479v1	-	I0000437-9
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.87513	52.2	-	BCOZ01	174	5024	4715	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043364	GCA_001570065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/065/GCA_001570065.1_ASM157006v1	27151793	NGUA27
Staphylococcus aureus DAR3781	1422167	PRJNA228250	228250	Terrabacteria group	Firmicutes	2.91609	32.9	-	JGPK01	10	3066	2899	3/27/14	3/4/17	Scaffold	Broad Institute	SAMN02403717	GCA_000608225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/225/GCA_000608225.1_Stap_aure_DAR3781_V1	-	DAR3781
Staphylococcus aureus DAR3782	1422168	PRJNA228251	228251	Terrabacteria group	Firmicutes	2.93722	32.9	-	JGPL01	9	3091	2927	3/27/14	3/4/17	Scaffold	Broad Institute	SAMN02403718	GCA_000608245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/245/GCA_000608245.1_Stap_aure_DAR3782_V1	-	DAR3782
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.88538	52.2	-	BCPA01	156	4951	4667	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043365	GCA_001570085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/085/GCA_001570085.1_ASM157008v1	27151793	NGUA28
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37881	65.6	-	MQEN01	7	4259	4094	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010231	GCA_001944815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/815/GCA_001944815.1_ASM194481v1	-	I0000808-1
Escherichia coli	562	PRJNA237735	237735	Proteobacteria	Gammaproteobacteria	4.59223	50.9	-	JENE03	15	4722	4334	4/23/14	2/23/17	Contig	The Hong Kong University of Science and Technology	SAMN02640261	GCA_000647815.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/815/GCA_000647815.3_ASM64781v3	25291771	E455L
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.12048	39.6	-	FYHA01	74	2360	2074	6/25/17	7/5/17	Contig	SC	SAMEA1026765	GCA_900189145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/145/GCA_900189145.1_6470_5_3	-	UoS0214
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.754	57.1	-	FWPE01	55	5777	5410	3/29/17	4/3/17	Scaffold	SC	SAMEA4362712	GCA_900174345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/345/GCA_900174345.1_20925_2_183	-	VRCO0296
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.75732	57.1	-	FWPH01	54	5769	5418	3/29/17	4/3/17	Scaffold	SC	SAMEA4362713	GCA_900174355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/355/GCA_900174355.1_20925_2_184	-	VRCO0298
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.18825	39.6	-	FYHK01	81	2461	2194	6/25/17	7/5/17	Contig	SC	SAMEA1026430	GCA_900189175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/175/GCA_900189175.1_6470_5_6	-	UoS0220
Escherichia coli	562	PRJNA244447	244447	Proteobacteria	Gammaproteobacteria	5.15343	50.8	-	JJNV01	202	5450	5018	5/5/14	2/23/17	Contig	Institute of Environmental Health	SAMN02726231	GCA_000681435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/435/GCA_000681435.1_IEH71520_1.0	24874672	O25b-ST131
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38274	65.6	-	MQEP01	10	4258	4099	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010233	GCA_001944845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/845/GCA_001944845.1_ASM194484v1	-	I0000353-8
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.69913	52.2	-	BCPB01	146	4748	4455	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043366	GCA_001570105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/105/GCA_001570105.1_ASM157010v1	27151793	NGUA29
Staphylococcus aureus DAR3788	1422169	PRJNA228252	228252	Terrabacteria group	Firmicutes	2.88076	32.8	-	JGPM01	9	3030	2869	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403719	GCA_000608265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/265/GCA_000608265.1_Stap_aure_DAR3788_V1	-	DAR3788
Staphylococcus aureus DAR3790	1422170	PRJNA228253	228253	Terrabacteria group	Firmicutes	2.94831	33	-	JGPN01	16	3083	2903	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403720	GCA_000608285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/285/GCA_000608285.1_Stap_aure_DAR3790_V1	-	DAR3790
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.86753	52.2	-	BCPC01	125	4936	4651	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043368	GCA_001570125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/125/GCA_001570125.1_ASM157012v1	27151793	NGUA30
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40741	65.6	-	MQEO01	4	4282	4109	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010232	GCA_001944855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/855/GCA_001944855.1_ASM194485v1	-	I0001494-9
Escherichia coli 1-176-05_S4_C2	1444244	PRJNA233901	233901	Proteobacteria	Gammaproteobacteria	5.0654	50.9	-	JMGW01	164	5407	4884	5/8/14	2/23/17	Contig	IGS	SAMN02680168	GCA_000687005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/005/GCA_000687005.1_ASM68700v1	-	1-176-05_S4_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.16064	39.5	-	FYGZ01	86	2398	2137	6/25/17	7/5/17	Contig	SC	SAMEA1026702	GCA_900189195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/195/GCA_900189195.1_6470_5_8	-	UoS0223
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.4351	57.4	-	FWPD01	48	5492	5218	3/29/17	4/3/17	Scaffold	SC	SAMEA4362716	GCA_900174365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/365/GCA_900174365.1_20925_2_187	-	VRCO0339
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.75389	57.1	-	FWPI01	60	5776	5406	3/29/17	4/3/17	Scaffold	SC	SAMEA4362714	GCA_900174375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/375/GCA_900174375.1_20925_2_185	-	VRCO0300
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09239	39.5	-	FYHJ01	77	2317	2077	6/25/17	7/5/17	Contig	SC	SAMEA1026590	GCA_900189205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/205/GCA_900189205.1_6470_5_10	-	UoS0233
Escherichia coli 2-011-08_S3_C2	1444148	PRJNA233805	233805	Proteobacteria	Gammaproteobacteria	5.30132	50.7	-	JMGU01	264	5936	5205	5/8/14	2/23/17	Contig	IGS	SAMN02687519	GCA_000687025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/025/GCA_000687025.1_ASM68702v1	-	2-011-08_S3_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37804	65.6	-	MQEQ01	8	4261	4093	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010234	GCA_001944865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/865/GCA_001944865.1_ASM194486v1	-	I0001296-8
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.73111	52.2	-	BCPD01	126	4787	4500	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043369	GCA_001570145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/145/GCA_001570145.1_ASM157014v1	27151793	NGUA31
Staphylococcus aureus DAR3794	1422171	PRJNA228254	228254	Terrabacteria group	Firmicutes	2.92757	32.9	-	JGPO01	18	3073	2900	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403721	GCA_000608305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/305/GCA_000608305.1_Stap_aure_DAR3794_V1	-	DAR3794
Staphylococcus aureus DAR3796	1422172	PRJNA228255	228255	Terrabacteria group	Firmicutes	2.84518	32.7	-	JGPP01	13	2984	2817	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403722	GCA_000608325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/325/GCA_000608325.1_Stap_aure_DAR3796_V1	-	DAR3796
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.82743	52.2	-	BCPE01	150	4885	4612	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043370	GCA_001570165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/165/GCA_001570165.1_ASM157016v1	27151793	NGUA32
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37428	65.6	-	MQER01	6	4255	4097	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010235	GCA_001944895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/895/GCA_001944895.1_ASM194489v1	-	C0013172-3
Escherichia coli 1-182-04_S1_C2	1444079	PRJNA233736	233736	Proteobacteria	Gammaproteobacteria	4.98233	50.5	-	JMGS01	112	5278	4831	5/8/14	2/23/17	Contig	IGS	SAMN02687492	GCA_000687045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/045/GCA_000687045.1_ASM68704v1	-	1-182-04_S1_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08331	39.5	-	FYHG01	80	2277	2052	6/25/17	7/5/17	Contig	SC	SAMEA1026605	GCA_900189215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/215/GCA_900189215.1_6470_5_11	-	UoS0237
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.03956	58.2	-	FWPM01	11	4994	4756	3/29/17	4/3/17	Scaffold	SC	SAMEA4362626	GCA_900174385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/385/GCA_900174385.1_20925_2_97	-	VRCO0334
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.04036	58.2	-	FWPN01	15	4985	4758	3/29/17	4/3/17	Scaffold	SC	SAMEA4362628	GCA_900174395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/395/GCA_900174395.1_20925_2_99	-	VRCO0336
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07931	39.5	-	FYHN01	78	2296	2048	6/25/17	7/5/17	Contig	SC	SAMEA1026583	GCA_900189225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/225/GCA_900189225.1_6470_5_9	-	UoS0232
Escherichia coli 2-011-08_S3_C3	1444176	PRJNA233833	233833	Proteobacteria	Gammaproteobacteria	5.14659	50.6	-	JMGV01	162	5595	5058	5/8/14	2/23/17	Contig	IGS	SAMN02680181	GCA_000687065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/065/GCA_000687065.1_ASM68706v1	-	2-011-08_S3_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37625	65.6	-	MQES01	9	4259	4094	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010236	GCA_001944935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/935/GCA_001944935.1_ASM194493v1	-	I0001425-3
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.70819	52.2	-	BCPF01	159	4755	4482	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043371	GCA_001570185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/185/GCA_001570185.1_ASM157018v1	27151793	NGUA33
Staphylococcus aureus DAR3799	1422173	PRJNA228256	228256	Terrabacteria group	Firmicutes	2.85371	32.8	-	JGPQ01	16	3007	2845	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403723	GCA_000608345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/345/GCA_000608345.1_Stap_aure_DAR3799_V1	-	DAR3799
Staphylococcus aureus DAR3840	1422174	PRJNA228257	228257	Terrabacteria group	Firmicutes	2.86195	32.9	-	JGPR01	9	3001	2845	3/27/14	3/4/17	Scaffold	Broad Institute	SAMN02403724	GCA_000608365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/365/GCA_000608365.1_Stap_aure_DAR3840_V1	-	DAR3840
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.68271	52.2	-	BCPG01	133	4712	4435	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043372	GCA_001570205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/205/GCA_001570205.1_ASM157020v1	27151793	NGUA34
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38323	65.6	-	MQEU01	9	4260	4095	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010238	GCA_001944945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/945/GCA_001944945.1_ASM194494v1	-	I0003165-3
Escherichia coli 2-052-05_S1_C1	1444038	PRJNA233695	233695	Proteobacteria	Gammaproteobacteria	5.27034	50.6	-	JMGR01	162	5617	5066	5/8/14	2/23/17	Contig	IGS	SAMN02680211	GCA_000687085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/085/GCA_000687085.1_ASM68708v1	-	2-052-05_S1_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.17707	39.5	-	FYHP01	71	2378	2142	6/25/17	7/5/17	Contig	SC	SAMEA1026506	GCA_900189235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/235/GCA_900189235.1_6470_6_4	-	UoS0279
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.54182	57.1	-	FWPL01	147	5554	5234	3/29/17	4/3/17	Scaffold	SC	SAMEA4362625	GCA_900174405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/405/GCA_900174405.1_20925_2_96	-	VRCO0331
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.43504	57.4	-	FWPQ01	48	5495	5217	3/29/17	4/3/17	Scaffold	SC	SAMEA4362717	GCA_900174415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/415/GCA_900174415.1_20925_2_188	-	VRCO0343
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10414	39.6	-	FYIB01	84	2322	2069	6/25/17	7/5/17	Contig	SC	SAMEA1026479	GCA_900189245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/245/GCA_900189245.1_6470_5_19	-	UoS0262
Escherichia coli 2-005-03_S3_C2	1444147	PRJNA233804	233804	Proteobacteria	Gammaproteobacteria	5.31018	50.6	-	JMGT01	121	5585	5131	5/8/14	2/23/17	Contig	IGS	SAMN02680137	GCA_000687105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/105/GCA_000687105.1_ASM68710v1	-	2-005-03_S3_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38999	65.6	-	MQEV01	11	4268	4098	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010239	GCA_001944955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/955/GCA_001944955.1_ASM194495v1	-	I0001498-0
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.87981	52.1	-	BCPH01	144	5002	4729	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043373	GCA_001570225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/225/GCA_001570225.1_ASM157022v1	27151793	NGUA35
Staphylococcus aureus DAR3842	1422175	PRJNA228258	228258	Terrabacteria group	Firmicutes	2.84267	32.8	-	JGPS01	9	2996	2836	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403725	GCA_000608385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/385/GCA_000608385.1_Stap_aure_DAR3842_V1	-	DAR3842
Staphylococcus aureus DAR3844	1422176	PRJNA228259	228259	Terrabacteria group	Firmicutes	2.89032	32.9	-	JGPT01	12	3014	2853	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403726	GCA_000608405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/405/GCA_000608405.1_Stap_aure_DAR3844_V1	-	DAR3844
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.52377	52.3	-	BCPI01	98	4583	4333	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043374	GCA_001570245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/245/GCA_001570245.1_ASM157024v1	27151793	NGUA36
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36024	65.6	-	MQEW01	10	4258	4092	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010240	GCA_001945005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/005/GCA_001945005.1_ASM194500v1	-	I0000205-0
Escherichia coli 2-011-08_S1_C1	1444037	PRJNA233694	233694	Proteobacteria	Gammaproteobacteria	5.33178	50.2	-	JMGQ01	125	5671	5097	5/8/14	2/23/17	Contig	IGS	SAMN02680263	GCA_000687125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/687/125/GCA_000687125.1_ASM68712v1	-	2-011-08_S1_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.14067	39.4	-	FYHU01	76	2344	2123	6/25/17	7/5/17	Contig	SC	SAMEA1026785	GCA_900189265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/265/GCA_900189265.1_6470_5_13	-	UoS0245
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.04035	58.2	-	FWPP01	13	4991	4756	3/29/17	4/10/17	Scaffold	SC	SAMEA4362627	GCA_900174425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/174/425/GCA_900174425.1_20925_2_98	-	VRCO0335
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.47561	57.2	-	FWWH01	48	5540	5257	4/5/17	4/17/17	Scaffold	SC	SAMEA4370514	GCA_900175095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/175/095/GCA_900175095.1_20794_7_97	-	VRES0978
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08487	39.6	-	FYHY01	46	2284	2063	6/25/17	7/5/17	Contig	SC	SAMEA1026578	GCA_900189275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/275/GCA_900189275.1_6470_5_23	-	UoS0268
Escherichia coli IS9	1411645	PRJEB4776	232019	Proteobacteria	Gammaproteobacteria	4.95023	50.6	-	CBWC01	367	5313	4738	1/2/14	2/23/17	Contig	AIT	SAMEA3139004	GCA_000689315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/689/315/GCA_000689315.1_IS9	-	IS9
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37998	65.6	-	MQEX01	11	4261	4091	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010241	GCA_001945025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/025/GCA_001945025.1_ASM194502v1	-	I0003466-5
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.8739	52.2	-	BCPJ01	159	4944	4650	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043375	GCA_001570265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/265/GCA_001570265.1_ASM157026v1	27151793	NGUA37
Staphylococcus aureus DAR3845	1422177	PRJNA228260	228260	Terrabacteria group	Firmicutes	2.8921	32.9	-	JGPU01	5	3035	2872	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403727	GCA_000608425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/425/GCA_000608425.1_Stap_aure_DAR3845_V1	-	DAR3845
Staphylococcus aureus DAR3847	1422178	PRJNA228261	228261	Terrabacteria group	Firmicutes	2.94435	32.9	-	JGPV01	17	3110	2937	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403728	GCA_000608445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/445/GCA_000608445.1_Stap_aure_DAR3847_V1	-	DAR3847
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.86023	51.9	-	BCPK01	181	4874	4596	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043376	GCA_001570285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/285/GCA_001570285.1_ASM157028v1	27151793	NGUA38
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37569	65.6	-	MQFA01	10	4257	4093	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010244	GCA_001945045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/045/GCA_001945045.1_ASM194504v1	-	I0001646-4
Escherichia coli DSM 30083 = JCM 1649 = ATCC 11775	866789	PRJNA50621	50621	Proteobacteria	Gammaproteobacteria	5.03813	50.6	-	AGSE01	2	5232	4900	5/6/14	2/23/17	Contig	DOE Joint Genome Institute	SAMN00718807	GCA_000690815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/815/GCA_000690815.1_ASM69081v1	-	DSM 30083
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08174	39.5	-	FYHX01	75	2303	2054	6/25/17	7/5/17	Contig	SC	SAMEA1026492	GCA_900189285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/285/GCA_900189285.1_6470_5_18	-	UoS0257
Klebsiella pneumoniae	573	PRJEB8766	291369	Proteobacteria	Gammaproteobacteria	5.45371	57.4	-	FWWJ01	22	5431	5179	4/5/17	4/17/17	Scaffold	SC	SAMEA3531570	GCA_900175105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/175/105/GCA_900175105.1_18090_4_59	-	VRCO0037
Klebsiella pneumoniae	573	PRJEB18814	361595	Proteobacteria	Gammaproteobacteria	5.33275	57.4	-	FWWK01	36	5359	5134	4/5/17	4/17/17	Scaffold	SC	SAMEA4362676	GCA_900175115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/175/115/GCA_900175115.1_20925_2_147	-	VRCO0473
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03674	39.6	-	FYHO01	60	2226	1998	6/25/17	7/5/17	Contig	SC	SAMEA1026469	GCA_900189305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/305/GCA_900189305.1_6470_6_6	-	UoS0281
Escherichia coli	562	PRJNA242755	242755	Proteobacteria	Gammaproteobacteria	5.1297	50.6	-	JICF01	146	5559	5145	5/14/14	2/23/17	Contig	"University of Maryland, School of Medicine"	SAMN02709452	GCA_000690945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/945/GCA_000690945.1_S7438	24926061	S7438
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37559	65.6	-	MQFB01	12	4263	4098	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010245	GCA_001945085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/085/GCA_001945085.1_ASM194508v1	-	I0000187-0
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	4.8784	52.2	-	BCPL01	155	4934	4652	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043377	GCA_001570305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/305/GCA_001570305.1_ASM157030v1	27151793	NGUA39
Staphylococcus aureus DAR3859	1422179	PRJNA228262	228262	Terrabacteria group	Firmicutes	2.89215	32.9	-	JGPW01	18	3017	2846	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403729	GCA_000608465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/465/GCA_000608465.1_Stap_aure_DAR3859_V1	-	DAR3859
Staphylococcus aureus DAR3861	1422180	PRJNA228263	228263	Terrabacteria group	Firmicutes	2.84554	32.8	-	JGPX01	12	2968	2803	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403730	GCA_000608485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/485/GCA_000608485.1_Stap_aure_DAR3861_V1	-	DAR3861
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	5.06221	52.1	-	BCPM01	183	4995	4745	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043379	GCA_001570325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/325/GCA_001570325.1_ASM157032v1	27151793	NGUA40
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39262	65.6	-	MQFC01	16	4284	4093	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010246	GCA_001945125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/125/GCA_001945125.1_ASM194512v1	-	I0000039-3
Escherichia coli	562	PRJNA242756	242756	Proteobacteria	Gammaproteobacteria	5.00874	50.5	-	JICE01	130	5368	5004	5/14/14	2/23/17	Contig	"University of Maryland, School of Medicine"	SAMN02709453	GCA_000690965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/965/GCA_000690965.1_S6400	24926061	S6400
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03937	39.6	-	FYHS01	61	2206	2000	6/25/17	7/5/17	Contig	SC	SAMEA1026807	GCA_900189315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/315/GCA_900189315.1_6470_5_14	-	UoS0251
Klebsiella pneumoniae	573	PRJEB19918	378746	Proteobacteria	Gammaproteobacteria	5.47764	57.2	-	FWWI01	42	5541	5276	4/5/17	4/17/17	Scaffold	SC	SAMEA4370558	GCA_900175125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/175/125/GCA_900175125.1_20794_7_141	-	VRES0976
Klebsiella pneumoniae	573	PRJEB20336	382097	Proteobacteria	Gammaproteobacteria	5.45125	58	-	FWYA01	23	5343	5103	4/8/17	4/17/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN03159480	GCA_900176555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/176/555/GCA_900176555.1_IMG-taxon_2675903046_annotated_assembly	-	NFIX52
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08776	39.7	-	FYHR01	61	2291	2056	6/25/17	7/5/17	Contig	SC	SAMEA1026490	GCA_900189325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/325/GCA_900189325.1_6470_6_3	-	UoS0276
Escherichia coli	562	PRJNA242754	242754	Proteobacteria	Gammaproteobacteria	5.43832	50.6	-	JICG01	194	5906	5442	5/14/14	2/23/17	Contig	"University of Maryland, School of Medicine"	SAMN02709451	GCA_000690985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/690/985/GCA_000690985.1_S7005	24926061	S7005
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39008	65.6	-	MQFE01	8	4265	4098	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010248	GCA_001945155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/155/GCA_001945155.1_ASM194515v1	-	I0005874-8
Salmonella enterica	28901	PRJDB4308	309823	Proteobacteria	Gammaproteobacteria	5.12665	52.1	-	BCPN01	321	5041	4778	1/22/16	8/14/17	Contig	South Dakota State University	SAMD00043380	GCA_001570345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/570/345/GCA_001570345.1_ASM157034v1	27151793	NGUA41
Staphylococcus aureus DAR3862	1422181	PRJNA228264	228264	Terrabacteria group	Firmicutes	2.95292	32.9	-	JGPY01	12	3108	2935	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403731	GCA_000608505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/505/GCA_000608505.1_Stap_aure_DAR3862_V1	-	DAR3862
Staphylococcus aureus DAR3864	1422182	PRJNA228265	228265	Terrabacteria group	Firmicutes	2.89555	32.8	-	JGPZ01	17	3052	2881	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403732	GCA_000608525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/525/GCA_000608525.1_Stap_aure_DAR3864_V1	-	DAR3864
Salmonella enterica	28901	PRJNA310420	310420	Proteobacteria	Gammaproteobacteria	4.72123	52.2	-	LRVA01	107	4824	4566	2/25/16	3/1/17	Contig	University of Malaya	SAMN04452392	GCA_001575015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/015/GCA_001575015.1_ASM157501v1	-	9
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38644	65.6	-	MQFF01	7	4260	4093	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010249	GCA_001945165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/165/GCA_001945165.1_ASM194516v1	-	I0005973-8
Escherichia coli	562	PRJNA242759	242759	Proteobacteria	Gammaproteobacteria	5.16425	50.4	-	JICB01	283	5605	5186	5/14/14	2/23/17	Contig	"University of Maryland, School of Medicine"	SAMN02709456	GCA_000691005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/005/GCA_000691005.1_S5274	24926061	S5274
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.0609	39.5	-	FYHL01	76	2256	2011	6/25/17	7/5/17	Contig	SC	SAMEA1026826	GCA_900189335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/335/GCA_900189335.1_6470_5_15	-	UoS0252
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.43338	57.2	-	FXND01	30	5459	5198	4/28/17	5/6/17	Scaffold	SC	SAMEA2609360	GCA_900180485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/485/GCA_900180485.1_14893_8_70	-	3189STDY5864735
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.50664	57.2	-	FXNS01	83	5612	5300	4/28/17	5/6/17	Scaffold	SC	SAMEA2609387	GCA_900180505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/505/GCA_900180505.1_14936_3_84	-	3189STDY5864842
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.99879	39.6	-	FYHM01	48	2176	1984	6/25/17	7/5/17	Contig	SC	SAMEA1026347	GCA_900189345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/345/GCA_900189345.1_6470_6_15	-	UoS0302
Escherichia coli	562	PRJNA242758	242758	Proteobacteria	Gammaproteobacteria	5.2266	50.6	-	JICC01	256	5721	5257	5/14/14	2/23/17	Contig	"University of Maryland, School of Medicine"	SAMN02709455	GCA_000691025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/025/GCA_000691025.1_S6662	24926061	S6662
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38825	65.6	-	MQFG01	18	4260	4099	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010250	GCA_001945205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/205/GCA_001945205.1_ASM194520v1	-	I0003015-0
Salmonella enterica	28901	PRJNA308552	308552	Proteobacteria	Gammaproteobacteria	5.03644	51.8	-	LQZK01	142	5090	4826	3/2/16	3/2/17	Contig	University of Malaya	SAMN04397008	GCA_001578485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/578/485/GCA_001578485.1_ASM157848v1	-	PS01
Staphylococcus aureus DAR3868	1422183	PRJNA228266	228266	Terrabacteria group	Firmicutes	2.85147	32.9	-	JGQA01	12	2987	2822	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403733	GCA_000608545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/545/GCA_000608545.1_Stap_aure_DAR3868_V1	-	DAR3868
Staphylococcus aureus DAR3870	1422184	PRJNA228267	228267	Terrabacteria group	Firmicutes	2.85133	32.9	-	JGQB01	6	2972	2811	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403734	GCA_000608565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/565/GCA_000608565.1_Stap_aure_DAR3870_V1	-	DAR3870
Salmonella enterica subsp. enterica	59201	PRJNA280335	280335	Proteobacteria	Gammaproteobacteria	5.17497	52	-	LSLR01	479	5341	5020	3/10/16	3/1/17	Contig	US Food and Drug Administration	SAMN03780255	GCA_001586435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/435/GCA_001586435.1_ASM158643v1	27151794	ADRDL-LA-5-2013
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38265	65.6	-	MQFI01	3	4259	4102	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010252	GCA_001945225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/225/GCA_001945225.1_ASM194522v1	-	I0001127-5
Escherichia coli	562	PRJNA242757	242757	Proteobacteria	Gammaproteobacteria	5.20052	50.5	-	JICD01	179	5636	5191	5/14/14	2/23/17	Contig	"University of Maryland, School of Medicine"	SAMN02709454	GCA_000691045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/045/GCA_000691045.1_S7380	24926061	S7380
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09553	39.5	-	FYHV01	57	2300	2072	6/25/17	7/5/17	Contig	SC	SAMEA1026627	GCA_900189355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/355/GCA_900189355.1_6470_5_21	-	UoS0266
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.33077	57.5	-	FXMT01	54	5354	5082	4/28/17	5/6/17	Scaffold	SC	SAMEA2609415	GCA_900180515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/515/GCA_900180515.1_14936_3_94	-	3189STDY5864852
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.47657	57.3	-	FXMU01	76	5554	5260	4/28/17	5/6/17	Scaffold	SC	SAMEA2609384	GCA_900180525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/525/GCA_900180525.1_14893_8_77	-	3189STDY5864742
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09647	39.6	-	FYIG01	53	2316	2075	6/25/17	7/5/17	Contig	SC	SAMEA1026446	GCA_900189365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/365/GCA_900189365.1_6470_5_17	-	UoS0256
Escherichia coli	562	PRJNA242751	242751	Proteobacteria	Gammaproteobacteria	5.21848	50.5	-	JICI01	117	5643	5217	5/14/14	2/23/17	Contig	"University of Maryland, School of Medicine"	SAMN02709449	GCA_000691065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/065/GCA_000691065.1_S6966	24926061	S6966
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37238	65.6	-	MQFH01	7	4267	4093	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010251	GCA_001945235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/235/GCA_001945235.1_ASM194523v1	-	I0004744-4
Salmonella enterica subsp. enterica	59201	PRJNA280335	280335	Proteobacteria	Gammaproteobacteria	4.95987	52.1	-	LSLO01	108	5156	4884	3/10/16	3/2/17	Contig	US Food and Drug Administration	SAMN03780252	GCA_001586445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/445/GCA_001586445.1_ASM158644v1	27151794	ADRDL-LA-2-2013
Staphylococcus aureus DAR3871	1422185	PRJNA228268	228268	Terrabacteria group	Firmicutes	2.9301	32.9	-	JGQC01	7	3085	2908	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403735	GCA_000608585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/585/GCA_000608585.1_Stap_aure_DAR3871_V1	-	DAR3871
Staphylococcus aureus DAR3885	1422186	PRJNA228269	228269	Terrabacteria group	Firmicutes	2.92343	32.8	-	JGQD01	33	3077	2899	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403736	GCA_000608605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/605/GCA_000608605.1_Stap_aure_DAR3885_V1	-	DAR3885
Salmonella enterica subsp. enterica	59201	PRJNA280335	280335	Proteobacteria	Gammaproteobacteria	4.95508	52.1	-	LSLN01	100	5156	4880	3/10/16	3/2/17	Contig	US Food and Drug Administration	SAMN03780251	GCA_001586465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/465/GCA_001586465.1_ASM158646v1	27151794	ADRDL-LA-1-2013
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37549	65.6	-	MQFJ01	7	4258	4093	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010253	GCA_001945245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/245/GCA_001945245.1_ASM194524v1	-	I0000845-3
Escherichia coli	562	PRJNA242753	242753	Proteobacteria	Gammaproteobacteria	5.21142	50.3	-	JICH01	134	5633	5177	5/14/14	2/23/17	Contig	"University of Maryland, School of Medicine"	SAMN02709450	GCA_000691085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/085/GCA_000691085.1_S6995	24926061	S6995
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08231	39.7	-	FYID01	94	2321	2085	6/25/17	7/5/17	Contig	SC	SAMEA1026580	GCA_900189385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/385/GCA_900189385.1_6470_5_22	-	UoS0267
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.76567	56.6	-	FXMD01	68	5806	5486	4/28/17	5/6/17	Scaffold	SC	SAMEA2609365	GCA_900180535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/535/GCA_900180535.1_14936_3_74	-	3189STDY5864832
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.47518	57.3	-	FXMV01	75	5551	5261	4/28/17	5/6/17	Scaffold	SC	SAMEA2609366	GCA_900180545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/545/GCA_900180545.1_14893_8_72	-	3189STDY5864737
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.11368	39.6	-	FYII01	64	2311	2081	6/25/17	7/5/17	Contig	SC	SAMEA1026534	GCA_900189405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/405/GCA_900189405.1_6470_6_11	-	UoS0290
Escherichia coli	562	PRJNA242760	242760	Proteobacteria	Gammaproteobacteria	5.25673	50.3	-	JICA01	195	5816	5352	5/14/14	2/23/17	Contig	"University of Maryland, School of Medicine"	SAMN02709457	GCA_000691105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/105/GCA_000691105.1_S6685	24926061	S6685
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38847	65.6	-	MQFL01	18	4264	4095	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010255	GCA_001945305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/305/GCA_001945305.1_ASM194530v1	-	I0005535-5
Salmonella enterica subsp. enterica	59201	PRJNA280335	280335	Proteobacteria	Gammaproteobacteria	4.96415	52.1	-	LSLQ01	112	5161	4894	3/10/16	3/2/17	Contig	US Food and Drug Administration	SAMN03780254	GCA_001586515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/515/GCA_001586515.1_ASM158651v1	27151794	ADRDL-LA-4-2013
Staphylococcus aureus DAR3886	1422187	PRJNA228270	228270	Terrabacteria group	Firmicutes	2.89562	32.9	-	JGQE01	4	3037	2872	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403737	GCA_000608625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/625/GCA_000608625.1_Stap_aure_DAR3886_V1	-	DAR3886
Staphylococcus aureus DAR3891	1422188	PRJNA228271	228271	Terrabacteria group	Firmicutes	2.94614	32.9	-	JGQF01	11	3098	2923	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403738	GCA_000608645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/645/GCA_000608645.1_Stap_aure_DAR3891_V1	-	DAR3891
Salmonella enterica subsp. enterica	59201	PRJNA280335	280335	Proteobacteria	Gammaproteobacteria	4.98328	52.1	-	LSLT01	184	5187	4900	3/10/16	3/1/17	Contig	US Food and Drug Administration	SAMN03780256	GCA_001586525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/525/GCA_001586525.1_ASM158652v1	27151794	ADRDL-LA-6-2013
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37542	65.6	-	MQFM01	11	4261	4094	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010256	GCA_001945315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/315/GCA_001945315.1_ASM194531v1	-	I0002793-3
Escherichia coli	562	PRJNA242431	242431	Proteobacteria	Gammaproteobacteria	5.93749	50.5	-	JHEW01	246	6570	6053	5/20/14	2/23/17	Contig	U.S. Food and Drug Administration	SAMN02693807	GCA_000695115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/115/GCA_000695115.1_Ecoli97-3250v1	-	97-3250
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.12933	39.6	-	FYIC01	59	2350	2103	6/25/17	7/5/17	Contig	SC	SAMEA1026447	GCA_900189445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/445/GCA_900189445.1_6470_5_16	-	UoS0254
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.79329	56.6	-	FXNN01	87	5866	5532	4/28/17	5/6/17	Scaffold	SC	SAMEA2609389	GCA_900180555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/555/GCA_900180555.1_14936_3_85	-	3189STDY5864843
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.79626	56.6	-	FXMX01	78	5870	5544	4/28/17	5/6/17	Scaffold	SC	SAMEA2609395	GCA_900180575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/575/GCA_900180575.1_14936_3_87	-	3189STDY5864845
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08907	39.6	-	FYIF01	71	2322	2072	6/25/17	7/5/17	Contig	SC	SAMEA1026542	GCA_900189455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/455/GCA_900189455.1_6470_6_9	-	UoS0288
Escherichia coli	562	PRJNA242431	242431	Proteobacteria	Gammaproteobacteria	5.40564	50.7	-	JHEX01	198	5897	5474	5/20/14	2/23/17	Contig	U.S. Food and Drug Administration	SAMN02693808	GCA_000695135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/135/GCA_000695135.1_Ecoli97-3250v1	-	PMK-5
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38411	65.6	-	MQFN01	7	4257	4099	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010257	GCA_001945325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/325/GCA_001945325.1_ASM194532v1	-	I0005814-4
Salmonella enterica subsp. enterica	59201	PRJNA280335	280335	Proteobacteria	Gammaproteobacteria	4.9887	52.1	-	LSLP01	174	5173	4900	3/10/16	3/2/17	Contig	US Food and Drug Administration	SAMN03780253	GCA_001586535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/535/GCA_001586535.1_ASM158653v1	27151794	ADRDL-LA-3-2013
Staphylococcus aureus DAR3892	1422189	PRJNA228272	228272	Terrabacteria group	Firmicutes	2.84564	32.9	-	JGQG01	12	2961	2793	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403739	GCA_000608665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/665/GCA_000608665.1_Stap_aure_DAR3892_V1	-	DAR3892
Staphylococcus aureus DAR3894	1422190	PRJNA228273	228273	Terrabacteria group	Firmicutes	2.9023	32.8	-	JGQH01	20	3054	2891	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403740	GCA_000608685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/685/GCA_000608685.1_Stap_aure_DAR3894_V1	-	DAR3894
Salmonella enterica subsp. enterica	59201	PRJNA280335	280335	Proteobacteria	Gammaproteobacteria	4.9927	52	-	LSLU01	175	5182	4899	3/10/16	3/1/17	Contig	US Food and Drug Administration	SAMN03780257	GCA_001586555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/555/GCA_001586555.1_ASM158655v1	27151794	ADRDL-LA-7-2013
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37747	65.6	-	MQKQ01	67	4288	4095	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010320	GCA_001945685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/685/GCA_001945685.1_ASM194568v1	-	I0000036-9
Escherichia coli O145:H28 str. 4865/96	1078035	PRJNA242431	242431	Proteobacteria	Gammaproteobacteria	5.25761	50.5	-	JHEY01	249	5564	5099	5/20/14	2/23/17	Contig	U.S. Food and Drug Administration	SAMN02693809	GCA_000695155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/155/GCA_000695155.1_Ecoli4865_96v1	-	4865/96
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.12111	39.5	-	FYIA01	85	2316	2088	6/25/17	7/5/17	Contig	SC	SAMEA1026478	GCA_900189465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/465/GCA_900189465.1_6470_6_24	-	UoS0315
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.8397	56.6	-	FXMC01	70	5899	5582	4/28/17	5/6/17	Scaffold	SC	SAMEA2609402	GCA_900180595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/595/GCA_900180595.1_14893_8_83	-	3189STDY5864748
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.66645	56.8	-	FXNP01	56	5777	5499	4/28/17	5/6/17	Scaffold	SC	SAMEA2609412	GCA_900180605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/605/GCA_900180605.1_14936_3_93	-	3189STDY5864851
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05978	39.5	-	FYIN01	57	2230	2018	6/25/17	7/5/17	Contig	SC	SAMEA1026468	GCA_900189475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/475/GCA_900189475.1_6470_6_21	-	UoS0310
Escherichia coli	562	PRJNA242431	242431	Proteobacteria	Gammaproteobacteria	5.49376	50.5	-	JHEZ01	228	5900	5394	5/20/14	2/23/17	Contig	U.S. Food and Drug Administration	SAMN02693810	GCA_000695175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/175/GCA_000695175.1_EcoliMI10-01v1	-	MI10-01
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39305	65.6	-	MQKP01	18	4270	4099	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010319	GCA_001945695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/695/GCA_001945695.1_ASM194569v1	-	I0000038-5
Salmonella enterica subsp. enterica	59201	PRJNA280335	280335	Proteobacteria	Gammaproteobacteria	5.03259	52.1	-	LSLS01	267	5184	4907	3/10/16	3/2/17	Contig	US Food and Drug Administration	SAMN03780265	GCA_001586595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/595/GCA_001586595.1_ASM158659v1	27151794	ADRDL-LA-5-2014
Staphylococcus aureus DAR3897	1422191	PRJNA228274	228274	Terrabacteria group	Firmicutes	2.84906	32.8	-	JGQI01	17	2966	2791	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403741	GCA_000608705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/705/GCA_000608705.1_Stap_aure_DAR3897_V1	-	DAR3897
Staphylococcus aureus DAR3901	1422192	PRJNA228275	228275	Terrabacteria group	Firmicutes	2.80559	32.8	-	JGQJ01	7	2899	2739	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403742	GCA_000608725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/725/GCA_000608725.1_Stap_aure_DAR3901_V1	-	DAR3901
Salmonella enterica subsp. enterica	59201	PRJNA280335	280335	Proteobacteria	Gammaproteobacteria	4.96179	52.1	-	LSLX01	106	5164	4885	3/10/16	3/2/17	Contig	US Food and Drug Administration	SAMN03780268	GCA_001586615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/615/GCA_001586615.1_ASM158661v1	27151794	ADRDL-LA-8-2014
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3906	65.6	-	MQKR01	7	4267	4106	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010321	GCA_001945705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/705/GCA_001945705.1_ASM194570v1	-	I0000071-6
Escherichia coli	562	PRJNA243046	243046	Proteobacteria	Gammaproteobacteria	5.22915	50.6	-	JMKH01	81	5568	5171	5/22/14	2/23/17	Contig	University of Oklahoma Health Sciences Center	SAMN02712194	GCA_000695505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/505/GCA_000695505.1_SCB34	24926049	SCB34
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.0939	39.7	-	FYIO01	104	2335	2084	6/25/17	7/5/17	Contig	SC	SAMEA1026324	GCA_900189485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/485/GCA_900189485.1_6470_6_12	-	UoS0291
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.8002	56.6	-	FXNJ01	76	5868	5536	4/28/17	5/6/17	Scaffold	SC	SAMEA2609376	GCA_900180615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/615/GCA_900180615.1_14936_3_79	-	3189STDY5864837
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.87381	56.6	-	FXME01	130	5987	5604	4/28/17	5/6/17	Scaffold	SC	SAMEA2609397	GCA_900180625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/625/GCA_900180625.1_14936_3_88	-	3189STDY5864846
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.98156	39.8	-	FYHQ01	58	2209	1977	6/25/17	7/5/17	Contig	SC	SAMEA1026591	GCA_900189495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/495/GCA_900189495.1_6470_5_24	-	UoS0272
Escherichia coli	562	PRJNA244290	244290	Proteobacteria	Gammaproteobacteria	5.13923	50.5	-	JJNT01	89	5420	4942	5/30/14	2/23/17	Contig	University of Technology Sydney	SAMN02725027	GCA_000696545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/545/GCA_000696545.1_v1	-	2009-46
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39421	65.6	-	MQKS01	5	4265	4103	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010322	GCA_001945715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/715/GCA_001945715.1_ASM194571v1	-	M0000517-4
Salmonella enterica subsp. enterica	59201	PRJNA280335	280335	Proteobacteria	Gammaproteobacteria	4.9737	52.1	-	LSMA01	128	5163	4890	3/10/16	3/2/17	Contig	US Food and Drug Administration	SAMN03780260	GCA_001586625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/625/GCA_001586625.1_ASM158662v1	27151794	ADRDL-LA-10-2013
Staphylococcus aureus DAR3902	1422193	PRJNA228276	228276	Terrabacteria group	Firmicutes	2.90124	32.8	-	JGQK01	16	3053	2876	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403743	GCA_000608745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/745/GCA_000608745.1_Stap_aure_DAR3902_V1	-	DAR3902
Staphylococcus aureus DAR3911	1422195	PRJNA228278	228278	Terrabacteria group	Firmicutes	2.88678	32.8	-	JGQL01	20	3035	2867	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403745	GCA_000608765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/765/GCA_000608765.1_Stap_aure_DAR3911_V1	-	DAR3911
Salmonella enterica subsp. enterica	59201	PRJNA280335	280335	Proteobacteria	Gammaproteobacteria	4.87009	52.1	-	LSLZ01	159	4935	4693	3/10/16	3/2/17	Contig	US Food and Drug Administration	SAMN03780269	GCA_001586655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/655/GCA_001586655.1_ASM158665v1	27151794	ADRDL-LA-9-2014
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38177	65.6	-	MQKU01	13	4261	4090	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010324	GCA_001945765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/765/GCA_001945765.1_ASM194576v1	-	M0000691-7
Escherichia coli	562	PRJNA246132	246132	Proteobacteria	Gammaproteobacteria	5.61456	50.6	-	JNBX01	153	6127	5567	6/2/14	2/23/17	Contig	Chinese Academy of Sciences	SAMN02743533	GCA_000696835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/696/835/GCA_000696835.1_ASM69683v1	24970825	W25K
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.14053	39.5	-	FYIL01	77	2369	2126	6/25/17	7/5/17	Contig	SC	SAMEA1026400	GCA_900189505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/505/GCA_900189505.1_6470_6_16	-	UoS0303
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.79892	56.6	-	FXMH01	88	5852	5536	4/28/17	5/6/17	Scaffold	SC	SAMEA2609409	GCA_900180645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/645/GCA_900180645.1_14936_3_92	-	3189STDY5864850
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.4328	57.2	-	FXLZ01	30	5455	5189	4/28/17	5/6/17	Scaffold	SC	SAMEA2609416	GCA_900180655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/655/GCA_900180655.1_14893_8_88	-	3189STDY5864753
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10008	39.6	-	FYIS01	65	2307	2104	6/25/17	7/5/17	Contig	SC	SAMEA1026358	GCA_900189525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/525/GCA_900189525.1_6470_6_14	-	UoS0301
Escherichia coli 4541-1	1454383	PRJNA236524	236524	Proteobacteria	Gammaproteobacteria	4.97435	50.8	-	JDWU01	163	5168	4852	6/9/14	2/23/17	Contig	Institute for Genome Sciences	SAMN02640644	GCA_000699265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/265/GCA_000699265.1_4541-1	24914121	4541-1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39258	65.6	-	MQKV01	9	4267	4098	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010325	GCA_001945795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/795/GCA_001945795.1_ASM194579v1	-	I0000153-2
Salmonella enterica subsp. enterica	59201	PRJNA280335	280335	Proteobacteria	Gammaproteobacteria	4.76307	52.2	-	LSLY01	1091	5398	4534	3/10/16	3/1/17	Contig	US Food and Drug Administration	SAMN03780259	GCA_001586675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/675/GCA_001586675.1_ASM158667v1	-	ADRDL-LA-9-2013
Staphylococcus aureus DAR3913	1422196	PRJNA228279	228279	Terrabacteria group	Firmicutes	2.8978	32.8	-	JGQM01	15	3037	2873	3/27/14	3/4/17	Scaffold	Broad Institute	SAMN02403746	GCA_000608785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/785/GCA_000608785.1_Stap_aure_DAR3913_V1	-	DAR3913
Staphylococcus aureus DAR3918	1422197	PRJNA228280	228280	Terrabacteria group	Firmicutes	2.82106	32.8	-	JGQN01	5	2921	2752	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403747	GCA_000608805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/805/GCA_000608805.1_Stap_aure_DAR3918_V1	-	DAR3918
Salmonella enterica subsp. enterica	59201	PRJNA280335	280335	Proteobacteria	Gammaproteobacteria	4.9927	52	-	LSLV01	175	5182	4899	3/10/16	3/1/17	Contig	US Food and Drug Administration	SAMN03780267	GCA_001586685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/685/GCA_001586685.1_ASM158668v1	27151794	ADRDL-LA-7-2014
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39121	65.6	-	MQKY01	17	4270	4098	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010328	GCA_001945855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/855/GCA_001945855.1_ASM194585v1	-	I0000335-5
Escherichia coli 4552-1	1455597	PRJNA236574	236574	Proteobacteria	Gammaproteobacteria	5.08328	50.9	-	JDWT01	129	5348	4934	6/9/14	2/23/17	Contig	Institute for Genome Sciences	SAMN02640645	GCA_000699285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/285/GCA_000699285.1_4552-1	24914121	4552-1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08061	39.6	-	FYIJ01	61	2279	2048	6/25/17	7/5/17	Contig	SC	SAMEA1026676	GCA_900189535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/535/GCA_900189535.1_6470_6_1	-	UoS0273
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.85457	56.8	-	FXNE01	83	6007	5664	4/28/17	5/6/17	Scaffold	SC	SAMEA2609405	GCA_900180665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/665/GCA_900180665.1_14893_8_84	-	3189STDY5864749
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.83693	56.9	-	FXMG01	101	5971	5666	4/28/17	5/6/17	Scaffold	SC	SAMEA2609377	GCA_900180675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/675/GCA_900180675.1_14893_8_75	-	3189STDY5864740
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.12152	39.5	-	FYIH01	89	2312	2064	6/25/17	7/5/17	Contig	SC	SAMEA1026444	GCA_900189545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/545/GCA_900189545.1_6470_6_7	-	UoS0284
Escherichia coli 10810	1455600	PRJNA236577	236577	Proteobacteria	Gammaproteobacteria	5.02994	51.5	-	JDWQ01	644	5373	4953	6/9/14	2/23/17	Contig	Institute for Genome Sciences	SAMN02640648	GCA_000699305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/305/GCA_000699305.1_10810	24914121	10810
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41007	65.6	-	MQKZ01	7	4277	4104	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010329	GCA_001945865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/865/GCA_001945865.1_ASM194586v1	-	I0000180-5
Salmonella enterica subsp. enterica	59201	PRJNA280335	280335	Proteobacteria	Gammaproteobacteria	4.97908	52.1	-	LSLW01	142	5182	4901	3/10/16	3/2/17	Contig	US Food and Drug Administration	SAMN03780258	GCA_001586695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/695/GCA_001586695.1_ASM158669v1	27151794	ADRDL-LA-8-2013
Staphylococcus aureus DAR3919	1422198	PRJNA228281	228281	Terrabacteria group	Firmicutes	2.92864	32.9	-	JGQO01	11	3056	2887	3/27/14	3/4/17	Scaffold	Broad Institute	SAMN02403748	GCA_000608825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/825/GCA_000608825.1_Stap_aure_DAR3919_V1	-	DAR3919
Staphylococcus aureus DAR3924	1422199	PRJNA228282	228282	Terrabacteria group	Firmicutes	2.89269	32.7	-	JGQP01	28	3051	2879	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403749	GCA_000608845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/845/GCA_000608845.1_Stap_aure_DAR3924_V1	-	DAR3924
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93916	52	-	LUHR01	286	5030	4798	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941170	GCA_001587755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/755/GCA_001587755.1_CFSAN033938_01.0	-	CFSAN033938
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38737	65.6	-	MQLA01	23	4280	4100	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010330	GCA_001945875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/875/GCA_001945875.1_ASM194587v1	-	I0000257-1
Escherichia coli 7996-1	1455598	PRJNA236575	236575	Proteobacteria	Gammaproteobacteria	5.30856	50.5	-	JDWS01	83	5540	5203	6/9/14	2/23/17	Contig	Institute for Genome Sciences	SAMN02640646	GCA_000699365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/365/GCA_000699365.1_7996-1	24914121	7996-1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06839	39.5	-	FYIP01	62	2257	2034	6/25/17	7/5/17	Contig	SC	SAMEA1026452	GCA_900189565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/565/GCA_900189565.1_6470_6_22	-	UoS0311
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.79572	56.6	-	FXMR01	78	5858	5528	4/28/17	5/6/17	Scaffold	SC	SAMEA2609392	GCA_900180705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/705/GCA_900180705.1_14936_3_86	-	3189STDY5864844
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.78961	56.6	-	FXNO01	84	5843	5521	4/28/17	5/6/17	Scaffold	SC	SAMEA2609380	GCA_900180715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/715/GCA_900180715.1_14936_3_81	-	3189STDY5864839
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.12544	39.6	-	FYIU01	59	2354	2110	6/25/17	7/5/17	Contig	SC	SAMEA1026566	GCA_900189575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/575/GCA_900189575.1_6472_5_6	-	UoS0321
Escherichia coli 11117	1455599	PRJNA236576	236576	Proteobacteria	Gammaproteobacteria	5.26259	51	-	JDWR01	182	5609	5248	6/9/14	2/23/17	Contig	Institute for Genome Sciences	SAMN02640647	GCA_000699385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/385/GCA_000699385.1_11117	24914121	11117
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.4025	65.6	-	MQLB01	19	4274	4108	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010331	GCA_001945925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/925/GCA_001945925.1_ASM194592v1	-	I0000508-7
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.25914	51.8	-	LUHT01	239	5436	5169	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941167	GCA_001587765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/765/GCA_001587765.1_CFSAN033935_01.0	-	CFSAN033935
Staphylococcus aureus DAR3928	1422200	PRJNA228283	228283	Terrabacteria group	Firmicutes	2.88655	32.8	-	JGQQ01	18	3027	2850	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403750	GCA_000608865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/865/GCA_000608865.1_Stap_aure_DAR3928_V1	-	DAR3928
Staphylococcus aureus DAR3930	1422201	PRJNA228284	228284	Terrabacteria group	Firmicutes	2.93302	32.9	-	JGQR01	13	3108	2942	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403751	GCA_000608885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/885/GCA_000608885.1_Stap_aure_DAR3930_V1	-	DAR3930
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.79886	52.1	-	LUHU01	180	4880	4666	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941166	GCA_001587775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/775/GCA_001587775.1_CFSAN033934_01.0	-	CFSAN033934
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36636	65.6	-	MQLC01	5	4263	4102	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010332	GCA_001945935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/935/GCA_001945935.1_ASM194593v1	-	C0000320-3
Escherichia coli 3-105-05_S4_C3	1444278	PRJNA233935	233935	Proteobacteria	Gammaproteobacteria	5.09828	50.9	-	JNMD01	242	5573	4855	6/10/14	2/23/17	Contig	IGS	SAMN02687534	GCA_000700065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/065/GCA_000700065.1_ASM70006v1	-	3-105-05_S4_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.16214	39.6	-	FYIW01	60	2386	2142	6/25/17	7/5/17	Contig	SC	SAMEA1026511	GCA_900189585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/585/GCA_900189585.1_6472_5_2	-	UoS0317
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.43287	57.2	-	FXNW01	25	5458	5194	4/28/17	5/6/17	Scaffold	SC	SAMEA2609399	GCA_900180735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/735/GCA_900180735.1_14893_8_82	-	3189STDY5864747
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.46892	57.1	-	FXNT01	300	5432	5135	4/28/17	5/6/17	Scaffold	SC	SAMEA2609391	GCA_900180745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/745/GCA_900180745.1_14936_2_80	-	3189STDY5864934
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.13204	39.6	-	FYIV01	58	2368	2124	6/25/17	7/5/17	Contig	SC	SAMEA1026549	GCA_900189595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/595/GCA_900189595.1_6472_5_5	-	UoS0320
Escherichia coli 3-267-03_S1_C3	1444111	PRJNA233768	233768	Proteobacteria	Gammaproteobacteria	5.314	50.7	-	JNME01	219	5849	5218	6/10/14	2/23/17	Contig	IGS	SAMN02680103	GCA_000700085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/085/GCA_000700085.1_ASM70008v1	-	3-267-03_S1_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3945	65.6	-	MQLE01	3	4264	4099	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010334	GCA_001945945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/945/GCA_001945945.1_ASM194594v1	-	I0000962-6
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.79928	52.1	-	LUHS01	202	4907	4678	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941169	GCA_001587785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/785/GCA_001587785.1_CFSAN033937_01.0	-	CFSAN033937
Staphylococcus aureus DAR3933	1422202	PRJNA228285	228285	Terrabacteria group	Firmicutes	2.95019	32.8	-	JGQS01	23	3101	2932	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403752	GCA_000608905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/905/GCA_000608905.1_Stap_aure_DAR3933_V1	-	DAR3933
Staphylococcus aureus DAR5880	1422203	PRJNA228286	228286	Terrabacteria group	Firmicutes	2.93464	32.9	-	JGQT01	28	3090	2888	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403753	GCA_000608925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/925/GCA_000608925.1_Stap_aure_DAR5880_V1	-	DAR5880
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.10592	51.8	-	LUIY01	229	5216	4972	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941124	GCA_001587835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/835/GCA_001587835.1_CFSAN033892_01.0	-	CFSAN033892
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38569	65.6	-	MQLD01	28	4275	4096	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010333	GCA_001945955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/955/GCA_001945955.1_ASM194595v1	-	C0001799-7
Escherichia coli 3-267-03_S3_C1	1444140	PRJNA233797	233797	Proteobacteria	Gammaproteobacteria	5.13377	50.8	-	JNMF01	180	5536	4965	6/10/14	2/23/17	Contig	IGS	SAMN02687531	GCA_000700105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/105/GCA_000700105.1_ASM70010v1	-	3-267-03_S3_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05207	39.6	-	FYJA01	46	2235	2033	6/25/17	7/5/17	Contig	SC	SAMEA1026538	GCA_900189605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/605/GCA_900189605.1_6472_5_4	-	UoS0319
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.79516	56.6	-	FXMB01	80	5875	5532	4/28/17	5/6/17	Scaffold	SC	SAMEA2609403	GCA_900180765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/765/GCA_900180765.1_14936_3_90	-	3189STDY5864848
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.61581	57.1	-	FXNK01	71	5710	5416	4/28/17	5/6/17	Scaffold	SC	SAMEA2609359	GCA_900180775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/775/GCA_900180775.1_14936_3_72	-	3189STDY5864830
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.11838	39.6	-	FYJD01	57	2342	2101	6/25/17	7/5/17	Contig	SC	SAMEA1026663	GCA_900189625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/625/GCA_900189625.1_6472_5_8	-	UoS0324
Escherichia coli 3-105-05_S1_C1	1444056	PRJNA233713	233713	Proteobacteria	Gammaproteobacteria	5.15231	51	-	JNLZ01	188	5595	4916	6/10/14	2/23/17	Contig	IGS	SAMN02687474	GCA_000700125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/125/GCA_000700125.1_ASM70012v1	-	3-105-05_S1_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39638	65.6	-	MQLG01	15	4274	4106	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010336	GCA_001946005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/005/GCA_001946005.1_ASM194600v1	-	I0000638-2
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.81406	52	-	LUHV01	187	4923	4711	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941165	GCA_001587845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/845/GCA_001587845.1_CFSAN033933_01.0	-	CFSAN033933
Staphylococcus aureus DAR22	1422204	PRJNA228287	228287	Terrabacteria group	Firmicutes	2.81173	32.9	-	JGQU01	11	2924	2757	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403754	GCA_000608945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/945/GCA_000608945.1_Stap_aure_DAR22_V1	-	DAR22
Staphylococcus aureus DAR5878	1422205	PRJNA228288	228288	Terrabacteria group	Firmicutes	2.97934	32.9	-	JGQV01	15	3143	2956	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403755	GCA_000608965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/965/GCA_000608965.1_Stap_aure_DAR5878_V1	-	DAR5878
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.86434	52.2	-	LUHW01	193	4976	4747	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941164	GCA_001587855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/855/GCA_001587855.1_CFSAN033932_01.0	-	CFSAN033932
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38162	65.6	-	MQLI01	17	4266	4092	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010338	GCA_001946015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/015/GCA_001946015.1_ASM194601v1	-	M0002604-8
Escherichia coli 3-105-05_S4_C2	1444250	PRJNA233907	233907	Proteobacteria	Gammaproteobacteria	5.35365	50.4	-	JNMC01	115	5639	5172	6/10/14	2/23/17	Contig	IGS	SAMN02680127	GCA_000700145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/145/GCA_000700145.1_ASM70014v1	-	3-105-05_S4_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10891	39.5	-	FYIX01	47	2297	2098	6/25/17	7/5/17	Contig	SC	SAMEA1026628	GCA_900189635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/635/GCA_900189635.1_6472_5_10	-	UoS2002
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.79456	56.6	-	FXMY01	73	5853	5535	4/28/17	5/6/17	Scaffold	SC	SAMEA2609378	GCA_900180785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/785/GCA_900180785.1_14936_3_80	-	3189STDY5864838
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.43071	57.2	-	FXMA01	24	5453	5198	4/28/17	5/6/17	Scaffold	SC	SAMEA2609370	GCA_900180795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/795/GCA_900180795.1_14893_8_73	-	3189STDY5864738
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.12022	39.6	-	FYIZ01	55	2339	2101	6/25/17	7/5/17	Contig	SC	SAMEA1026603	GCA_900189645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/645/GCA_900189645.1_6472_5_11	-	UoS2003
Escherichia coli 2-011-08_S1_C3	1444093	PRJNA233750	233750	Proteobacteria	Gammaproteobacteria	4.96521	50.9	-	JNNA01	159	5274	4730	6/10/14	2/23/17	Contig	IGS	SAMN02680189	GCA_000700165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/165/GCA_000700165.1_ASM70016v1	-	2-011-08_S1_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38367	65.6	-	MQLH01	17	4265	4094	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010337	GCA_001946035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/035/GCA_001946035.1_ASM194603v1	-	I0000774-5
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.84647	52.2	-	LUHX01	207	4968	4740	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941162	GCA_001587885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/885/GCA_001587885.1_CFSAN033930_01.0	-	CFSAN033930
Staphylococcus aureus DAR5877	1422206	PRJNA228290	228290	Terrabacteria group	Firmicutes	2.85482	32.8	-	JGQW01	68	3009	2813	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403756	GCA_000608985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/608/985/GCA_000608985.1_Stap_aure_DAR5877_V1	-	DAR5877
Staphylococcus aureus DAR5875	1422207	PRJNA228291	228291	Terrabacteria group	Firmicutes	2.9584	33.2	-	JGQX01	5	3031	2833	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403757	GCA_000609005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/005/GCA_000609005.1_Stap_aure_DAR5875_V1	-	DAR5875
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.84356	52.2	-	LUHY01	196	4958	4735	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941161	GCA_001587915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/915/GCA_001587915.1_CFSAN033929_01.0	-	CFSAN033929
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39071	65.6	-	MQLM01	27	4276	4082	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010342	GCA_001946115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/115/GCA_001946115.1_ASM194611v1	-	I0001196-0
Escherichia coli 3-105-05_S3_C1	1444139	PRJNA233796	233796	Proteobacteria	Gammaproteobacteria	5.11797	50.5	-	JNMA01	182	5520	4957	6/10/14	2/23/17	Contig	IGS	SAMN02680265	GCA_000700185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/185/GCA_000700185.1_ASM70018v1	-	3-105-05_S3_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03298	39.6	-	FYIY01	38	2228	2003	6/25/17	7/5/17	Contig	SC	SAMEA1026588	GCA_900189665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/665/GCA_900189665.1_6472_5_12	-	UoS2006
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.49139	57.2	-	FXNI01	100	5591	5227	4/28/17	5/6/17	Scaffold	SC	SAMEA2609362	GCA_900180815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/815/GCA_900180815.1_14936_3_73	-	3189STDY5864831
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.48169	57.3	-	FXNM01	83	5569	5262	4/28/17	5/6/17	Scaffold	SC	SAMEA2609390	GCA_900180825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/825/GCA_900180825.1_15277_3_61	-	3189STDY5864744
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07453	39.6	-	FYJF01	49	2281	2033	6/25/17	7/5/17	Contig	SC	SAMEA1026559	GCA_900189675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/675/GCA_900189675.1_6472_5_16	-	UoS2021
Escherichia coli 3-105-05_S3_C2	1444167	PRJNA233824	233824	Proteobacteria	Gammaproteobacteria	5.09793	50.6	-	JNMB01	179	5495	4915	6/10/14	2/23/17	Contig	IGS	SAMN02680170	GCA_000700205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/205/GCA_000700205.1_ASM70020v1	-	3-105-05_S3_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41434	65.6	-	MQLN01	3	4283	4107	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010344	GCA_001946165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/165/GCA_001946165.1_ASM194616v1	-	I0001325-5
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93372	52.1	-	LUHZ01	210	5091	4852	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941159	GCA_001587925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/925/GCA_001587925.1_CFSAN033927_01.0	-	CFSAN033927
Staphylococcus aureus DAR5874	1422208	PRJNA228292	228292	Terrabacteria group	Firmicutes	2.94691	32.9	-	JGQY01	18	3092	2905	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403758	GCA_000609025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/025/GCA_000609025.1_Stap_aure_DAR5874_V1	-	DAR5874
Staphylococcus aureus DAR5873	1422209	PRJNA228293	228293	Terrabacteria group	Firmicutes	2.91843	32.8	-	JGQZ01	14	3072	2913	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403759	GCA_000609045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/045/GCA_000609045.1_Stap_aure_DAR5873_V1	-	DAR5873
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.79644	52.1	-	LUIA01	193	4870	4653	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941158	GCA_001587945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/945/GCA_001587945.1_CFSAN033926_01.0	-	CFSAN033926
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3766	65.6	-	MQFO01	25	4275	4093	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010347	GCA_001946185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/185/GCA_001946185.1_ASM194618v1	-	I0001475-8
Escherichia coli 3-373-03_S3_C1	1444141	PRJNA233798	233798	Proteobacteria	Gammaproteobacteria	4.62721	50.8	-	JNMG01	117	4888	4379	6/10/14	2/23/17	Contig	IGS	SAMN02687499	GCA_000700225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/225/GCA_000700225.1_ASM70022v1	-	3-373-03_S3_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03051	39.6	-	FYJB01	47	2231	2008	6/25/17	7/5/17	Contig	SC	SAMEA1026718	GCA_900189685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/685/GCA_900189685.1_6472_5_18	-	UoS2027
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.89009	56.5	-	FXNC01	98	5982	5647	4/28/17	5/6/17	Scaffold	SC	SAMEA2609396	GCA_900180835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/835/GCA_900180835.1_14893_8_81	-	3189STDY5864746
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.66757	56.8	-	FXMP01	53	5797	5497	4/28/17	5/6/17	Scaffold	SC	SAMEA2609369	GCA_900180845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/845/GCA_900180845.1_14936_3_76	-	3189STDY5864834
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03291	39.6	-	FYJE01	64	2216	1998	6/25/17	7/5/17	Contig	SC	SAMEA1026741	GCA_900189695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/695/GCA_900189695.1_6472_5_21	-	UoS2032
Escherichia coli 3-373-03_S3_C3	1444194	PRJNA233851	233851	Proteobacteria	Gammaproteobacteria	4.87174	50.8	-	JNMH01	106	5115	4687	6/10/14	2/23/17	Contig	IGS	SAMN02680147	GCA_000700245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/245/GCA_000700245.1_ASM70024v1	-	3-373-03_S3_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3992	65.6	-	MQLP01	33	4287	4097	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010346	GCA_001946195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/195/GCA_001946195.1_ASM194619v1	-	M0003941-3
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.80342	52.1	-	LUIB01	192	4885	4660	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941157	GCA_001587965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/965/GCA_001587965.1_CFSAN033925_01.0	-	CFSAN033925
Staphylococcus aureus DAR951	1422210	PRJNA228294	228294	Terrabacteria group	Firmicutes	2.96562	32.8	-	JGRA01	50	3140	2968	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403760	GCA_000609065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/065/GCA_000609065.1_Stap_aure_DAR951_V1	-	DAR951
Staphylococcus aureus DAR966	1422211	PRJNA228295	228295	Terrabacteria group	Firmicutes	2.95154	32.9	-	JGRB01	9	3126	2960	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403761	GCA_000609085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/085/GCA_000609085.1_Stap_aure_DAR966_V1	-	DAR966
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.84347	52.2	-	LUIC01	227	4971	4734	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941154	GCA_001587995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/995/GCA_001587995.1_CFSAN033922_01.0	-	CFSAN033922
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3807	65.6	-	MQFR01	9	4263	4093	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010350	GCA_001946265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/265/GCA_001946265.1_ASM194626v1	-	I0001509-4
Escherichia coli 3-373-03_S1_C2	1444086	PRJNA233743	233743	Proteobacteria	Gammaproteobacteria	5.06696	50.8	-	JNMI01	178	5465	4888	6/10/14	2/23/17	Contig	IGS	SAMN02680222	GCA_000700265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/265/GCA_000700265.1_ASM70026v1	-	3-373-03_S1_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05883	39.5	-	FYJO01	63	2255	2029	6/25/17	7/5/17	Contig	SC	SAMEA1026353	GCA_900189715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/715/GCA_900189715.1_6472_6_8	-	UoS2060
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.94403	56.5	-	FXNG01	123	6100	5742	4/28/17	5/6/17	Scaffold	SC	SAMEA2609404	GCA_900180885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/885/GCA_900180885.1_14936_2_84	-	3189STDY5864938
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.79422	56.6	-	FXMS01	78	5851	5529	4/28/17	5/6/17	Scaffold	SC	SAMEA2609406	GCA_900180905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/905/GCA_900180905.1_14936_3_91	-	3189STDY5864849
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.0467	39.7	-	FYJK01	47	2277	2055	6/25/17	7/5/17	Contig	SC	SAMEA1026630	GCA_900189735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/735/GCA_900189735.1_6472_5_23	-	UoS2037
Escherichia coli 3-475-03_S1_C1	1444059	PRJNA233716	233716	Proteobacteria	Gammaproteobacteria	4.78992	50.9	-	JNMJ01	194	5108	4527	6/10/14	2/23/17	Contig	IGS	SAMN02680239	GCA_000700285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/285/GCA_000700285.1_ASM70028v1	-	3-475-03_S1_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36533	65.6	-	MQFS01	10	4260	4087	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010351	GCA_001946275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/275/GCA_001946275.1_ASM194627v1	-	I0001539-1
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.85336	52.2	-	LUID01	196	4975	4725	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941153	GCA_001588015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/015/GCA_001588015.1_CFSAN033921_01.0	-	CFSAN033921
Staphylococcus aureus DAR1065	1422212	PRJNA228296	228296	Terrabacteria group	Firmicutes	2.91391	32.8	-	JGRC01	10	3047	2868	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403762	GCA_000609105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/105/GCA_000609105.1_Stap_aure_DAR1065_V1	-	DAR1065
Staphylococcus aureus DAR1067	1422213	PRJNA228297	228297	Terrabacteria group	Firmicutes	2.92655	32.9	-	JGRD01	9	3084	2917	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403763	GCA_000609125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/125/GCA_000609125.1_Stap_aure_DAR1067_V1	-	DAR1067
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.91848	52.1	-	LUIE01	255	5046	4789	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941151	GCA_001588025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/025/GCA_001588025.1_CFSAN033919_01.0	-	CFSAN033919
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38046	65.6	-	MQFU01	12	4263	4094	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010353	GCA_001946325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/325/GCA_001946325.1_ASM194632v1	-	I0001939-3
Escherichia coli 3-475-03_S4_C1	1444225	PRJNA233882	233882	Proteobacteria	Gammaproteobacteria	4.92922	50.7	-	JNMK01	105	5167	4758	6/10/14	2/23/17	Contig	IGS	SAMN02687482	GCA_000700305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/305/GCA_000700305.1_ASM70030v1	-	3-475-03_S4_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09581	39.5	-	FYJJ01	65	2274	2056	6/25/17	7/5/17	Contig	SC	SAMEA1026351	GCA_900189755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/755/GCA_900189755.1_6472_6_22	-	UoS2134
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.80033	56.6	-	FXMQ01	77	5866	5542	4/28/17	5/6/17	Scaffold	SC	SAMEA2609400	GCA_900180925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/925/GCA_900180925.1_14936_3_89	-	3189STDY5864847
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.54987	57.1	-	FXNA01	58	5626	5322	4/28/17	5/6/17	Scaffold	SC	SAMEA2609417	GCA_900180935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/935/GCA_900180935.1_14936_2_88	-	3189STDY5864942
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06684	39.6	-	FYJQ01	39	2275	2061	6/25/17	7/5/17	Contig	SC	SAMEA1026733	GCA_900189765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/765/GCA_900189765.1_6472_7_8	-	UoS2191
Escherichia coli 3-105-05_S4_C1	1444222	PRJNA233879	233879	Proteobacteria	Gammaproteobacteria	4.92902	50.8	-	JNML01	85	5143	4757	6/10/14	2/23/17	Contig	IGS	SAMN02687515	GCA_000700325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/325/GCA_000700325.1_ASM70032v1	-	3-105-05_S4_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34559	65.6	-	MQFV01	19	4241	4080	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010354	GCA_001946335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/335/GCA_001946335.1_ASM194633v1	-	I0000221-7
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.78765	52.2	-	LUIF01	160	4858	4650	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941150	GCA_001588045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/045/GCA_001588045.1_CFSAN033918_01.0	-	CFSAN033918
Staphylococcus aureus DAR1082	1422214	PRJNA228298	228298	Terrabacteria group	Firmicutes	2.82703	32.9	-	JGRE01	5	2939	2771	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403764	GCA_000609145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/145/GCA_000609145.1_Stap_aure_DAR1082_V1	-	DAR1082
Staphylococcus aureus DAR1083	1422215	PRJNA228299	228299	Terrabacteria group	Firmicutes	2.90382	33	-	JGRF01	8	3053	2888	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403765	GCA_000609165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/165/GCA_000609165.1_Stap_aure_DAR1083_V1	-	DAR1083
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.04444	51.9	-	LUIG01	229	5170	4932	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941149	GCA_001588075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/075/GCA_001588075.1_CFSAN033917_01.0	-	CFSAN033917
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39248	65.6	-	MQFT01	10	4260	4096	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010352	GCA_001946345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/345/GCA_001946345.1_ASM194634v1	-	I0001107-7
Escherichia coli 3-267-03_S3_C2	1444168	PRJNA233825	233825	Proteobacteria	Gammaproteobacteria	4.85059	50.7	-	JNMM01	79	5057	4674	6/10/14	2/23/17	Contig	IGS	SAMN02680188	GCA_000700345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/345/GCA_000700345.1_ASM70034v1	-	3-267-03_S3_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08405	39.6	-	FYJN01	55	2293	2065	6/25/17	7/5/17	Contig	SC	SAMEA1026546	GCA_900189775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/775/GCA_900189775.1_6472_5_15	-	UoS2018
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.8574	56.8	-	FXMF01	104	5995	5671	4/28/17	5/6/17	Scaffold	SC	SAMEA2609374	GCA_900180945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/945/GCA_900180945.1_14893_8_74	-	3189STDY5864739
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.56804	56.9	-	FXNQ01	68	5626	5322	4/28/17	5/6/17	Scaffold	SC	SAMEA2609364	GCA_900180955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/955/GCA_900180955.1_14936_2_73	-	3189STDY5864927
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06494	39.5	-	FYKD01	72	2270	2058	6/25/17	7/5/17	Contig	SC	SAMEA1026382	GCA_900189785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/785/GCA_900189785.1_6470_6_17	-	UoS0304
Escherichia coli 3-267-03_S1_C2	1444085	PRJNA233742	233742	Proteobacteria	Gammaproteobacteria	5.11535	50.5	-	JNMN01	87	5273	4862	6/10/14	2/23/17	Contig	IGS	SAMN02687525	GCA_000700365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/365/GCA_000700365.1_ASM70036v1	-	3-267-03_S1_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38957	65.6	-	MQFW01	16	4265	4092	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010355	GCA_001946355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/355/GCA_001946355.1_ASM194635v1	-	I0001620-9
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.06205	51.8	-	LUIH01	255	5185	4921	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941147	GCA_001588095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/095/GCA_001588095.1_CFSAN033915_01.0	-	CFSAN033915
Staphylococcus aureus DAR1084	1422216	PRJNA228300	228300	Terrabacteria group	Firmicutes	2.87532	32.8	-	JGRG01	7	3015	2857	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403766	GCA_000609185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/185/GCA_000609185.1_Stap_aure_DAR1084_V1	-	DAR1084
Staphylococcus aureus DAR1086	1422217	PRJNA228301	228301	Terrabacteria group	Firmicutes	2.89103	32.9	-	JGRH01	8	3056	2886	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403767	GCA_000609205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/205/GCA_000609205.1_Stap_aure_DAR1086_V1	-	DAR1086
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.78689	52.2	-	LUII01	175	4847	4641	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941146	GCA_001588105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/105/GCA_001588105.1_CFSAN033914_01.0	-	CFSAN033914
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.33487	65.6	-	MQFX01	20	4242	4070	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010356	GCA_001946405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/405/GCA_001946405.1_ASM194640v1	-	I0001583-9
Escherichia coli 3-105-05_S3_C3	1444193	PRJNA233850	233850	Proteobacteria	Gammaproteobacteria	4.99583	50.8	-	JNMO01	200	5460	4755	6/10/14	2/23/17	Contig	IGS	SAMN02687473	GCA_000700385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/385/GCA_000700385.1_ASM70038v1	-	3-105-05_S3_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05159	39.6	-	FYJI01	59	2257	2022	6/25/17	7/5/17	Contig	SC	SAMEA1026679	GCA_900189795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/795/GCA_900189795.1_6472_6_1	-	UoS2041
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.83265	56.9	-	FXNB01	109	5962	5661	4/28/17	5/6/17	Scaffold	SC	SAMEA2609413	GCA_900180965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/965/GCA_900180965.1_14893_8_87	-	3189STDY5864752
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.43652	57.2	-	FXMI01	40	5461	5200	4/28/17	5/6/17	Scaffold	SC	SAMEA2609363	GCA_900180975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/975/GCA_900180975.1_14893_8_71	-	3189STDY5864736
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05673	39.5	-	FYJS01	63	2248	2023	6/25/17	7/5/17	Contig	SC	SAMEA1026420	GCA_900189805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/805/GCA_900189805.1_6472_6_13	-	UoS2074
Escherichia coli 3-267-03_S1_C1	1444057	PRJNA233714	233714	Proteobacteria	Gammaproteobacteria	5.45313	50.7	-	JNMP01	236	5975	5326	6/10/14	2/23/17	Contig	IGS	SAMN02687476	GCA_000700405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/405/GCA_000700405.1_ASM70040v1	-	3-267-03_S1_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3849	65.6	-	MQFY01	12	4272	4105	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010357	GCA_001946415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/415/GCA_001946415.1_ASM194641v1	-	I0001402-2
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.87451	52.1	-	LUIJ01	214	4999	4771	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941145	GCA_001588125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/125/GCA_001588125.1_CFSAN033913_01.0	-	CFSAN033913
Staphylococcus aureus DAR1090	1422218	PRJNA228302	228302	Terrabacteria group	Firmicutes	2.74349	32.8	-	JGRI01	7	2838	2681	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403768	GCA_000609225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/225/GCA_000609225.1_Stap_aure_DAR1090_V1	-	DAR1090
Staphylococcus aureus DAR1157	1422219	PRJNA228303	228303	Terrabacteria group	Firmicutes	2.804	32.9	-	JGRJ01	4	2914	2753	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403769	GCA_000609245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/245/GCA_000609245.1_Stap_aure_DAR1157_V1	-	DAR1157
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.03097	51.9	-	LUIK01	181	5151	4929	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941143	GCA_001588155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/155/GCA_001588155.1_CFSAN033911_01.0	-	CFSAN033911
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39222	65.6	-	MQGE01	14	4268	4095	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010363	GCA_001946435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/435/GCA_001946435.1_ASM194643v1	-	I0002335-3
Escherichia coli 3-373-03_S3_C2	1444169	PRJNA233826	233826	Proteobacteria	Gammaproteobacteria	4.8085	50.8	-	JNMQ01	82	5026	4653	6/10/14	2/23/17	Contig	IGS	SAMN02680212	GCA_000700425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/425/GCA_000700425.1_ASM70042v1	-	3-373-03_S3_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.14826	39.5	-	FYJR01	77	2368	2114	6/25/17	7/5/17	Contig	SC	SAMEA1026462	GCA_900189835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/835/GCA_900189835.1_6470_6_20	-	UoS0308
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.3293	57.5	-	FXNX01	49	5342	5084	4/28/17	5/6/17	Scaffold	SC	SAMEA2609418	GCA_900180985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/985/GCA_900180985.1_14936_3_95	-	3189STDY5864853
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.63975	57.1	-	FXNY01	55	5740	5451	4/28/17	5/6/17	Scaffold	SC	SAMEA2609419	GCA_900180995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/180/995/GCA_900180995.1_14893_8_89	-	3189STDY5864754
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07757	39.6	-	FYJX01	51	2297	2071	6/25/17	7/5/17	Contig	SC	SAMEA1026750	GCA_900189845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/845/GCA_900189845.1_6472_6_16	-	UoS2090
Escherichia coli 3-267-03_S4_C2	1444251	PRJNA233908	233908	Proteobacteria	Gammaproteobacteria	5.39054	50.5	-	JNMR01	185	5777	5280	6/10/14	2/23/17	Contig	IGS	SAMN02687485	GCA_000700445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/445/GCA_000700445.1_ASM70044v1	-	3-267-03_S4_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40184	65.6	-	MQGK01	16	4284	4106	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010369	GCA_001946485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/485/GCA_001946485.1_ASM194648v1	-	I0002435-1
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69992	52.2	-	LUIL01	175	4748	4546	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941142	GCA_001588165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/165/GCA_001588165.1_CFSAN033910_01.0	-	CFSAN033910
Staphylococcus aureus DAR1158	1422220	PRJNA228304	228304	Terrabacteria group	Firmicutes	2.80156	32.9	-	JGRK01	5	2902	2748	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403770	GCA_000609265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/265/GCA_000609265.1_Stap_aure_DAR1158_V1	-	DAR1158
Staphylococcus aureus DAR1161	1422221	PRJNA228305	228305	Terrabacteria group	Firmicutes	2.77029	32.9	-	JGRL01	3	2887	2737	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403771	GCA_000609285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/285/GCA_000609285.1_Stap_aure_DAR1161_V1	-	DAR1161
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.84744	52.2	-	LUIM01	198	4965	4738	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941141	GCA_001588195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/195/GCA_001588195.1_CFSAN033909_01.0	-	CFSAN033909
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38989	65.6	-	MQGH01	10	4260	4096	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010366	GCA_001946495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/495/GCA_001946495.1_ASM194649v1	-	I0001672-0
Escherichia coli 3-373-03_S4_C2	1444252	PRJNA233909	233909	Proteobacteria	Gammaproteobacteria	5.32885	50.6	-	JNMS01	203	5832	5236	6/10/14	2/23/17	Contig	IGS	SAMN02680095	GCA_000700465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/465/GCA_000700465.1_ASM70046v1	-	3-373-03_S4_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.01523	39.7	-	FYLA01	51	2212	2007	6/25/17	7/5/17	Contig	SC	SAMEA1026838	GCA_900189855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/855/GCA_900189855.1_6472_6_20	-	UoS2130
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.54882	57.1	-	FXNZ01	65	5617	5325	4/28/17	5/6/17	Scaffold	SC	SAMEA2609420	GCA_900181005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/005/GCA_900181005.1_14936_2_89	-	3189STDY5864943
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.62657	57.1	-	FXOD01	79	5724	5431	4/28/17	5/6/17	Scaffold	SC	SAMEA2609422	GCA_900181015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/015/GCA_900181015.1_14893_8_90	-	3189STDY5864755
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09195	39.6	-	FYKA01	77	2297	2063	6/25/17	7/5/17	Contig	SC	SAMEA1026694	GCA_900189865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/865/GCA_900189865.1_6472_7_1	-	UoS2149
Escherichia coli 3-073-06_S4_C1	1444221	PRJNA233878	233878	Proteobacteria	Gammaproteobacteria	5.40838	50.8	-	JNMT01	252	5976	5273	6/10/14	2/23/17	Contig	IGS	SAMN02680187	GCA_000700485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/485/GCA_000700485.1_ASM70048v1	-	3-073-06_S4_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35293	65.6	-	MQGO01	15	4257	4091	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010373	GCA_001946505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/505/GCA_001946505.1_ASM194650v1	-	I0003147-1
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70108	52.2	-	LUIN01	183	4752	4542	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941140	GCA_001588215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/215/GCA_001588215.1_CFSAN033908_01.0	-	CFSAN033908
Staphylococcus aureus DAR1174	1422222	PRJNA228306	228306	Terrabacteria group	Firmicutes	2.8882	32.9	-	JGRM01	6	3025	2861	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403772	GCA_000609305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/305/GCA_000609305.1_Stap_aure_DAR1174_V1	-	DAR1174
Staphylococcus aureus DAR1176	1422223	PRJNA228307	228307	Terrabacteria group	Firmicutes	2.73617	32.9	-	JGRN01	4	2801	2645	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403773	GCA_000609325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/325/GCA_000609325.1_Stap_aure_DAR1176_V1	-	DAR1176
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.914	51.9	-	LUIO01	201	5008	4771	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941138	GCA_001588235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/235/GCA_001588235.1_CFSAN033906_01.0	-	CFSAN033906
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38396	65.6	-	MQGL01	27	4269	4096	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010370	GCA_001946515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/515/GCA_001946515.1_ASM194651v1	-	M0007097-0
Escherichia coli 2-011-08_S3_C1	1444118	PRJNA233775	233775	Proteobacteria	Gammaproteobacteria	5.16308	50.7	-	JNNB01	169	5605	5075	6/10/14	2/23/17	Contig	IGS	SAMN02680101	GCA_000700505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/505/GCA_000700505.1_ASM70050v1	-	2-011-08_S3_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.04319	39.7	-	FYJL01	45	2246	2027	6/25/17	7/5/17	Contig	SC	SAMEA1026749	GCA_900189875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/875/GCA_900189875.1_6472_6_17	-	UoS2092
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.5041	57.3	-	FXOB01	50	5518	5250	4/28/17	5/6/17	Scaffold	SC	SAMEA2609421	GCA_900181035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/035/GCA_900181035.1_14936_2_1	-	3189STDY5864854
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.62148	57.1	-	FXOM01	78	5734	5435	4/28/17	5/6/17	Scaffold	SC	SAMEA2609428	GCA_900181075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/075/GCA_900181075.1_14893_8_92	-	3189STDY5864757
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09174	39.6	-	FYJT01	52	2304	2062	6/25/17	7/5/17	Contig	SC	SAMEA1026678	GCA_900189885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/885/GCA_900189885.1_6472_7_2	-	UoS2153
Escherichia coli 2-011-08_S4_C3	1444259	PRJNA233916	233916	Proteobacteria	Gammaproteobacteria	4.81492	50.9	-	JNND01	172	5198	4618	6/10/14	2/23/17	Contig	IGS	SAMN02680096	GCA_000700525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/525/GCA_000700525.1_ASM70052v1	-	2-011-08_S4_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38055	65.6	-	MQGX01	19	4268	4094	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010382	GCA_001946575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/575/GCA_001946575.1_ASM194657v1	-	I0002627-3
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.97432	51.9	-	LUIP01	227	5063	4814	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941137	GCA_001588255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/255/GCA_001588255.1_CFSAN033905_01.0	-	CFSAN033905
Staphylococcus aureus DAR1183	1422224	PRJNA228308	228308	Terrabacteria group	Firmicutes	2.79263	32.9	-	JGRO01	5	2909	2746	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403774	GCA_000609345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/345/GCA_000609345.1_Stap_aure_DAR1183_V1	-	DAR1183
Staphylococcus aureus DAR1200	1422225	PRJNA228309	228309	Terrabacteria group	Firmicutes	2.92039	32.8	-	JGRP01	10	3091	2931	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403775	GCA_000609365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/365/GCA_000609365.1_Stap_aure_DAR1200_V1	-	DAR1200
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.774	52.2	-	LUIQ01	233	4817	4585	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941136	GCA_001588275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/275/GCA_001588275.1_CFSAN033904_01.0	-	CFSAN033904
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.4092	65.6	-	MQHC01	15	4286	4128	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010387	GCA_001946655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/655/GCA_001946655.1_ASM194665v1	-	I0002609-1
Escherichia coli 2-052-05_S4_C1	1444202	PRJNA233859	233859	Proteobacteria	Gammaproteobacteria	5.30248	50.7	-	JNNG01	178	5769	5176	6/10/14	2/23/17	Contig	IGS	SAMN02680190	GCA_000700545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/545/GCA_000700545.1_ASM70054v1	-	2-052-05_S4_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.01326	39.7	-	FYKY01	46	2216	2025	6/25/17	7/5/17	Contig	SC	SAMEA1026823	GCA_900189895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/895/GCA_900189895.1_6472_6_21	-	UoS2131
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.62093	57	-	FXOE01	73	5644	5354	4/28/17	5/6/17	Scaffold	SC	SAMEA2609427	GCA_900181085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/085/GCA_900181085.1_14936_2_3	-	3189STDY5864856
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.68241	56.8	-	FXOR01	168	5783	5335	4/28/17	5/6/17	Scaffold	SC	SAMEA2609431	GCA_900181095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/095/GCA_900181095.1_14936_2_4	-	3189STDY5864857
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.12815	39.6	-	FYJP01	82	2341	2130	6/25/17	7/5/17	Contig	SC	SAMEA1026751	GCA_900189935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/935/GCA_900189935.1_6472_7_7	-	UoS2186
Escherichia coli 2-052-05_S1_C3	1444094	PRJNA233751	233751	Proteobacteria	Gammaproteobacteria	5.23116	50.6	-	JNNE01	148	5592	5044	6/10/14	2/23/17	Contig	IGS	SAMN02680244	GCA_000700565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/565/GCA_000700565.1_ASM70056v1	-	2-052-05_S1_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39714	65.6	-	MQHG01	17	4274	4102	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010391	GCA_001946705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/705/GCA_001946705.1_ASM194670v1	-	I0003405-3
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69331	52.2	-	LUIR01	179	4746	4532	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941135	GCA_001588285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/285/GCA_001588285.1_CFSAN033903_01.0	-	CFSAN033903
Staphylococcus aureus DAR1275	1422226	PRJNA228310	228310	Terrabacteria group	Firmicutes	3.00383	32.8	-	JGRQ01	7	3164	2993	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403776	GCA_000609385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/385/GCA_000609385.1_Stap_aure_DAR1275_V1	-	DAR1275
Staphylococcus aureus DAR1276	1422227	PRJNA228311	228311	Terrabacteria group	Firmicutes	2.95012	33	-	JGRR01	10	3137	2967	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403777	GCA_000609405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/405/GCA_000609405.1_Stap_aure_DAR1276_V1	-	DAR1276
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.06328	51.7	-	LUIS01	196	5175	4950	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941134	GCA_001588315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/315/GCA_001588315.1_CFSAN033902_01.0	-	CFSAN033902
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36473	65.6	-	MQHP01	3	4263	4090	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010400	GCA_001946725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/725/GCA_001946725.1_ASM194672v1	-	M0013793-6
Escherichia coli 2-011-08_S4_C1	1444201	PRJNA233858	233858	Proteobacteria	Gammaproteobacteria	4.83916	50.9	-	JNNC01	183	5201	4638	6/10/14	2/23/17	Contig	IGS	SAMN02687510	GCA_000700585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/585/GCA_000700585.1_ASM70058v1	-	2-011-08_S4_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.0624	39.5	-	FYJM01	68	2261	2037	6/25/17	7/5/17	Contig	SC	SAMEA1026804	GCA_900189955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/955/GCA_900189955.1_6472_6_18	-	UoS2105
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.61988	57	-	FXOH01	69	5640	5348	4/28/17	5/6/17	Scaffold	SC	SAMEA2609424	GCA_900181115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/115/GCA_900181115.1_14936_2_2	-	3189STDY5864855
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.79632	56.4	-	FXOC01	106	5965	5645	4/28/17	5/6/17	Scaffold	SC	SAMEA2609435	GCA_900181125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/125/GCA_900181125.1_14936_2_94	-	3189STDY5864948
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.12591	39.5	-	FYKI01	56	2328	2119	6/25/17	7/5/17	Contig	SC	SAMEA1026646	GCA_900189965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/965/GCA_900189965.1_6472_5_9	-	UoS2001
Escherichia coli 2-052-05_S3_C1	1444119	PRJNA233776	233776	Proteobacteria	Gammaproteobacteria	4.95513	50.6	-	JNNF01	135	5174	4735	6/10/14	2/23/17	Contig	IGS	SAMN02680183	GCA_000700605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/605/GCA_000700605.1_ASM70060v1	-	2-052-05_S3_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37967	65.6	-	MQLQ01	3	4256	4096	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010403	GCA_001946745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/745/GCA_001946745.1_ASM194674v1	-	M0014035-1
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.10815	51.7	-	LUIT01	227	5241	5005	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941132	GCA_001588335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/335/GCA_001588335.1_CFSAN033900_01.0	-	CFSAN033900
Staphylococcus aureus DAR1278	1422228	PRJNA228312	228312	Terrabacteria group	Firmicutes	2.86703	32.8	-	JGRS01	14	3009	2837	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403778	GCA_000609425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/425/GCA_000609425.1_Stap_aure_DAR1278_V1	-	DAR1278
Staphylococcus aureus DAR1291	1422229	PRJNA228313	228313	Terrabacteria group	Firmicutes	2.88574	32.8	-	JGRT01	8	3021	2860	3/27/14	3/4/17	Scaffold	Broad Institute	SAMN02403779	GCA_000609445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/445/GCA_000609445.1_Stap_aure_DAR1291_V1	-	DAR1291
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.06077	51.8	-	LUIU01	212	5193	4948	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941131	GCA_001588355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/355/GCA_001588355.1_CFSAN033899_01.0	-	CFSAN033899
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34237	65.6	-	MQLX01	47	4251	4081	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010410	GCA_001946785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/785/GCA_001946785.1_ASM194678v1	-	I0004260-1
Escherichia coli 3-373-03_S1_C3	1444112	PRJNA233769	233769	Proteobacteria	Gammaproteobacteria	5.13179	50.9	-	JNMU01	171	5478	4903	6/10/14	2/23/17	Contig	IGS	SAMN02680221	GCA_000700625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/625/GCA_000700625.1_ASM70062v1	-	3-373-03_S1_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05082	39.5	-	FYKE01	53	2251	2024	6/25/17	7/5/17	Contig	SC	SAMEA1026787	GCA_900189975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/975/GCA_900189975.1_6472_6_19	-	UoS2122
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.79604	56.4	-	FXOO01	99	5969	5638	4/28/17	5/6/17	Scaffold	SC	SAMEA2609438	GCA_900181135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/135/GCA_900181135.1_14936_2_95	-	3189STDY5864949
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.62135	57	-	FXOS01	64	5636	5355	4/28/17	5/6/17	Scaffold	SC	SAMEA2609436	GCA_900181165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/165/GCA_900181165.1_14936_2_6	-	3189STDY5864859
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.0361	39.6	-	FYKP01	49	2218	2014	6/25/17	7/5/17	Contig	SC	SAMEA1026383	GCA_900189995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/995/GCA_900189995.1_6472_6_10	-	UoS2067
Escherichia coli 3-373-03_S1_C1	1444058	PRJNA233715	233715	Proteobacteria	Gammaproteobacteria	5.08936	50.8	-	JNMV01	152	5442	4878	6/10/14	2/23/17	Contig	IGS	SAMN02680220	GCA_000700645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/645/GCA_000700645.1_ASM70064v1	-	3-373-03_S1_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38629	65.6	-	MQMA01	5	4265	4102	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010413	GCA_001946795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/795/GCA_001946795.1_ASM194679v1	-	I0004269-2
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.04447	51.8	-	LUIV01	218	5180	4926	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941130	GCA_001588365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/365/GCA_001588365.1_CFSAN033898_01.0	-	CFSAN033898
Staphylococcus aureus DAR1293	1422230	PRJNA228314	228314	Terrabacteria group	Firmicutes	2.99232	32.8	-	JGRU01	11	3149	2973	3/27/14	3/4/17	Scaffold	Broad Institute	SAMN02403780	GCA_000609465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/465/GCA_000609465.1_Stap_aure_DAR1293_V1	-	DAR1293
Staphylococcus aureus DAR1295	1422231	PRJNA228315	228315	Terrabacteria group	Firmicutes	2.8722	32.8	-	JGRV01	10	2999	2820	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403781	GCA_000609485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/485/GCA_000609485.1_Stap_aure_DAR1295_V1	-	DAR1295
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.97792	52	-	LUIW01	331	5076	4836	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941127	GCA_001588395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/395/GCA_001588395.1_CFSAN033895_01.0	-	CFSAN033895
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39299	65.6	-	MQHU01	11	4266	4097	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010419	GCA_001946835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/835/GCA_001946835.1_ASM194683v1	-	I0004243-7
Escherichia coli 3-373-03_S4_C1	1444224	PRJNA233881	233881	Proteobacteria	Gammaproteobacteria	5.29475	50.6	-	JNMW01	171	5755	5209	6/10/14	2/23/17	Contig	IGS	SAMN02680173	GCA_000700665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/665/GCA_000700665.1_ASM70066v1	-	3-373-03_S4_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07809	39.6	-	FYKS01	57	2278	2053	6/25/17	7/5/17	Contig	SC	SAMEA1026682	GCA_900190005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/005/GCA_900190005.1_6472_6_2	-	UoS2050
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.63396	57.1	-	FXOL01	68	5748	5449	4/28/17	5/6/17	Scaffold	SC	SAMEA2609433	GCA_900181175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/175/GCA_900181175.1_14936_3_2	-	3189STDY5864759
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.63302	57.1	-	FXOP01	69	5741	5445	4/28/17	5/6/17	Scaffold	SC	SAMEA2609440	GCA_900181195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/195/GCA_900181195.1_14936_3_4	-	3189STDY5864761
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.01761	39.7	-	FYLC01	47	2219	1997	6/25/17	7/5/17	Contig	SC	SAMEA1026487	GCA_900190015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/015/GCA_900190015.1_6472_7_11	-	UoS2205
Escherichia coli 3-475-03_S4_C2	1444253	PRJNA233910	233910	Proteobacteria	Gammaproteobacteria	5.05505	51	-	JNMX01	170	5477	4827	6/10/14	2/23/17	Contig	IGS	SAMN02680260	GCA_000700685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/685/GCA_000700685.1_ASM70068v1	-	3-475-03_S4_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38643	65.6	-	MQIH01	20	4277	4092	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010432	GCA_001946885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/885/GCA_001946885.1_ASM194688v1	-	M0017764-3
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.96852	52.2	-	LUIX01	273	5071	4816	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941126	GCA_001588415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/415/GCA_001588415.1_CFSAN033894_01.0	-	CFSAN033894
Staphylococcus aureus DAR1310	1422232	PRJNA228316	228316	Terrabacteria group	Firmicutes	2.88801	32.9	-	JGRW01	9	3043	2880	3/27/14	3/4/17	Scaffold	Broad Institute	SAMN02403782	GCA_000609505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/505/GCA_000609505.1_Stap_aure_DAR1310_V1	-	DAR1310
Staphylococcus aureus DAR1311	1422233	PRJNA228317	228317	Terrabacteria group	Firmicutes	2.84123	32.8	-	JGRX01	6	2960	2780	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403783	GCA_000609525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/525/GCA_000609525.1_Stap_aure_DAR1311_V1	-	DAR1311
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.0102	51.8	-	LUIZ01	246	5073	4825	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941121	GCA_001588435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/435/GCA_001588435.1_CFSAN033889_01.0	-	CFSAN033889
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40904	65.6	-	MQIE01	12	4284	4131	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010429	GCA_001946895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/895/GCA_001946895.1_ASM194689v1	-	I0003719-7
Escherichia coli 4-203-08_S1_C1	1444060	PRJNA233717	233717	Proteobacteria	Gammaproteobacteria	5.27069	50.8	-	JNMY01	173	5558	5085	6/10/14	2/23/17	Contig	IGS	SAMN02680105	GCA_000700705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/705/GCA_000700705.1_ASM70070v1	-	4-203-08_S1_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08559	39.6	-	FYKG01	52	2286	2063	6/25/17	7/5/17	Contig	SC	SAMEA1026328	GCA_900190035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/035/GCA_900190035.1_6472_6_6	-	UoS2055
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.45868	57.2	-	FXOT01	35	5500	5215	4/28/17	5/6/17	Scaffold	SC	SAMEA2609437	GCA_900181205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/205/GCA_900181205.1_14936_3_3	-	3189STDY5864760
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.63539	57.1	-	FXOZ01	72	5737	5453	4/28/17	5/6/17	Scaffold	SC	SAMEA2609443	GCA_900181215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/215/GCA_900181215.1_14936_3_6	-	3189STDY5864763
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.96671	39.7	-	FYKT01	34	2170	1960	6/25/17	7/5/17	Contig	SC	SAMEA1026721	GCA_900190045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/045/GCA_900190045.1_6472_7_9	-	UoS2196
Escherichia coli 4-203-08_S4_C3	1444280	PRJNA233937	233937	Proteobacteria	Gammaproteobacteria	5.00753	50.6	-	JNMZ01	180	5424	4832	6/10/14	2/23/17	Contig	IGS	SAMN02680234	GCA_000700725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/700/725/GCA_000700725.1_ASM70072v1	-	4-203-08_S4_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39205	65.6	-	MQIK01	14	4269	4097	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010435	GCA_001946945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/945/GCA_001946945.1_ASM194694v1	-	C0011909-0
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93755	52.2	-	LUJA01	187	5062	4785	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941119	GCA_001588455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/455/GCA_001588455.1_CFSAN033887_01.0	-	CFSAN033887
Staphylococcus aureus DAR1313	1422234	PRJNA228318	228318	Terrabacteria group	Firmicutes	2.88641	32.8	-	JGRY01	7	3019	2849	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403784	GCA_000609545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/545/GCA_000609545.1_Stap_aure_DAR1313_V1	-	DAR1313
Staphylococcus aureus DAR1369	1422235	PRJNA228319	228319	Terrabacteria group	Firmicutes	2.80876	32.8	-	JGRZ01	13	2944	2769	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403785	GCA_000609565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/565/GCA_000609565.1_Stap_aure_DAR1369_V1	-	DAR1369
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.91264	52.2	-	LUJB01	201	5017	4756	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941118	GCA_001588475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/475/GCA_001588475.1_CFSAN033886_01.0	-	CFSAN033886
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38863	65.6	-	MQIN01	3	4261	4100	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010438	GCA_001946955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/955/GCA_001946955.1_ASM194695v1	-	I0004228-8
Escherichia coli MS499	1450517	PRJNA235368	235368	Proteobacteria	Gammaproteobacteria	4.87226	50.7	-	JDRV01	447	5195	4731	6/11/14	2/23/17	Contig	iPUD	SAMN02839404	GCA_000701145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/145/GCA_000701145.1_EcMS4991.0	24994791	MS499
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07123	39.6	-	FYKL01	50	2265	2042	6/25/17	7/5/17	Contig	SC	SAMEA1026667	GCA_900190055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/055/GCA_900190055.1_6472_7_4	-	UoS2168
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.52251	57.2	-	FXPE01	81	5542	5215	4/28/17	5/6/17	Scaffold	SC	SAMEA2609434	GCA_900181235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/235/GCA_900181235.1_14936_2_5	-	3189STDY5864858
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.45975	57.2	-	FXOU01	37	5499	5216	4/28/17	5/6/17	Scaffold	SC	SAMEA2609447	GCA_900181245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/245/GCA_900181245.1_14936_3_8	-	3189STDY5864765
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.04149	39.7	-	FYKX01	37	2240	2015	6/25/17	7/5/17	Contig	SC	SAMEA1026643	GCA_900190065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/065/GCA_900190065.1_6472_7_14	-	UoS2216
Escherichia coli O69:H11 str. 07-3763	1446751	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.66975	50.7	-	JASN01	19	6143	5607	6/11/14	2/23/17	Contig	CDC	SAMN02352915	GCA_000703205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/205/GCA_000703205.1_Ec07-3763	-	Jul-63
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38864	65.6	-	MQIQ01	6	4259	4094	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010441	GCA_001946965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/965/GCA_001946965.1_ASM194696v1	-	I0003192-7
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.91204	52.1	-	LUJC01	188	5015	4771	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941117	GCA_001588495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/495/GCA_001588495.1_CFSAN033885_01.0	-	CFSAN033885
Staphylococcus aureus DAR1370	1422236	PRJNA228320	228320	Terrabacteria group	Firmicutes	2.78512	32.9	-	JGSA01	2	2892	2729	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403786	GCA_000609585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/585/GCA_000609585.1_Stap_aure_DAR1370_V1	-	DAR1370
Staphylococcus aureus DAR1490	1422237	PRJNA228321	228321	Terrabacteria group	Firmicutes	2.88519	32.9	-	JGSB01	8	3026	2861	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403787	GCA_000609605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/605/GCA_000609605.1_Stap_aure_DAR1490_V1	-	DAR1490
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.96346	52.2	-	LUJD01	270	5066	4830	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941110	GCA_001588515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/515/GCA_001588515.1_CFSAN033878_01.0	-	CFSAN033878
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39011	65.6	-	MQIX01	3	4268	4115	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010448	GCA_001947025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/025/GCA_001947025.1_ASM194702v1	-	I0004625-5
Escherichia coli O145:H25 str. 07-3858	1446583	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.62619	50.6	-	JASO01	21	6070	5457	6/11/14	2/23/17	Contig	CDC	SAMN02352916	GCA_000703225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/225/GCA_000703225.1_Ec07-3858	-	Jul-58
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03417	39.5	-	FYKV01	49	2208	1993	6/25/17	7/5/17	Contig	SC	SAMEA1026719	GCA_900190075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/075/GCA_900190075.1_6472_6_14	-	UoS2076
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.61925	57	-	FXOQ01	73	5635	5339	4/28/17	5/6/17	Scaffold	SC	SAMEA2609444	GCA_900181255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/255/GCA_900181255.1_14936_2_9	-	3189STDY5864862
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.77812	56.6	-	FXOW01	77	5851	5518	4/28/17	5/6/17	Scaffold	SC	SAMEA2609451	GCA_900181275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/275/GCA_900181275.1_14936_2_12	-	3189STDY5864865
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10324	39.6	-	FYKM01	49	2305	2101	6/25/17	7/5/17	Contig	SC	SAMEA1026649	GCA_900190085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/085/GCA_900190085.1_6472_7_3	-	UoS2166
Escherichia coli O118:H16 str. 07-4255	1446547	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.93264	50.7	-	JASP01	14	6467	5952	6/11/14	2/23/17	Contig	CDC	SAMN02352917	GCA_000703245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/245/GCA_000703245.1_Ec07-4255	-	Jul-55
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39212	65.6	-	MQJB01	3	4268	4104	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010452	GCA_001947045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/045/GCA_001947045.1_ASM194704v1	-	M0020319-1
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.96049	52.1	-	LUJE01	827	4919	4701	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941107	GCA_001588535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/535/GCA_001588535.1_CFSAN033875_01.0	-	CFSAN033875
Staphylococcus aureus DAR1492	1422238	PRJNA228322	228322	Terrabacteria group	Firmicutes	2.87419	32.8	-	JGSC01	13	3030	2867	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403788	GCA_000609625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/625/GCA_000609625.1_Stap_aure_DAR1492_V1	-	DAR1492
Staphylococcus aureus DAR1507	1422239	PRJNA228324	228324	Terrabacteria group	Firmicutes	2.93766	32.9	-	JGSD01	11	3105	2931	3/27/14	3/4/17	Scaffold	Broad Institute	SAMN02403789	GCA_000609645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/645/GCA_000609645.1_Stap_aure_DAR1507_V1	-	DAR1507
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.18193	52.1	-	LUJF01	655	5309	5041	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941100	GCA_001588545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/545/GCA_001588545.1_CFSAN033868_01.0	-	CFSAN033868
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34741	65.6	-	MQJE01	15	4241	4073	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010455	GCA_001947065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/065/GCA_001947065.1_ASM194706v1	-	I0005247-7
Escherichia coli O91:H21 str. 2009C-3740	1446765	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.02824	50.8	-	JASQ01	3	5229	4890	6/11/14	2/23/17	Contig	CDC	SAMN02352937	GCA_000703265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/265/GCA_000703265.1_Ec2009C-3740	-	2009C-3740
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.17964	39.6	-	FYLB01	76	2440	2192	6/25/17	7/5/17	Contig	SC	SAMEA1026715	GCA_900190105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/105/GCA_900190105.1_6472_5_19	-	UoS2029
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.608	57.1	-	FXPD01	79	5676	5357	4/28/17	5/6/17	Scaffold	SC	SAMEA2609453	GCA_900181295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/295/GCA_900181295.1_14936_2_13	-	3189STDY5864866
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.88512	56.5	-	FXPG01	128	5977	5631	4/28/17	5/6/17	Scaffold	SC	SAMEA2609455	GCA_900181305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/305/GCA_900181305.1_14936_2_14	-	3189STDY5864867
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.01942	39.7	-	FYKJ01	44	2208	2021	6/25/17	7/5/17	Contig	SC	SAMEA1026776	GCA_900190115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/115/GCA_900190115.1_6472_6_15	-	UoS2082
Escherichia coli O146:H21 str. 2010C-3325	1446599	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.54158	50.7	-	JASR01	10	5821	5397	6/11/14	2/23/17	Contig	CDC	SAMN02352963	GCA_000703285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/285/GCA_000703285.1_Ec2010C-3325	-	2010C-3325
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37874	65.6	-	MQJH01	14	4261	4093	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010458	GCA_001947105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/105/GCA_001947105.1_ASM194710v1	-	I0004783-2
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.13474	51.9	-	LUJG01	368	5307	5030	3/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941091	GCA_001588565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/565/GCA_001588565.1_CFSAN033859_01.0	-	CFSAN033859
Staphylococcus aureus DAR1692	1422240	PRJNA228325	228325	Terrabacteria group	Firmicutes	2.89789	32.9	-	JGSE01	8	3062	2902	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403790	GCA_000609665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/665/GCA_000609665.1_Stap_aure_DAR1692_V1	-	DAR1692
Staphylococcus aureus DAR1698	1422241	PRJNA228326	228326	Terrabacteria group	Firmicutes	2.83361	32.9	-	JGSF01	2	2962	2796	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403791	GCA_000609685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/685/GCA_000609685.1_Stap_aure_DAR1698_V1	-	DAR1698
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.88442	52.1	-	LVFH01	89	5022	4757	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941171	GCA_001594425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/425/GCA_001594425.1_CFSAN033939_02.0	-	CFSAN033939
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39253	65.6	-	MQJL01	27	4279	4099	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010462	GCA_001947115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/115/GCA_001947115.1_ASM194711v1	-	I0003376-6
Escherichia coli O45:H2 str. 2010C-4211	1446744	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.65727	50.7	-	JASS01	21	6121	5626	6/11/14	2/23/17	Contig	CDC	SAMN02352983	GCA_000703305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/305/GCA_000703305.1_Ec2010C-4211	-	2010C-4211
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07124	39.7	-	FYKH01	78	2298	2053	6/25/17	7/5/17	Contig	SC	SAMEA1026586	GCA_900190135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/135/GCA_900190135.1_6472_6_24	-	UoS2146
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.63372	57.1	-	FXPI01	83	5711	5407	4/28/17	5/6/17	Scaffold	SC	SAMEA2609449	GCA_900181315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/315/GCA_900181315.1_14936_2_11	-	3189STDY5864864
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.57938	57	-	FXOV01	73	5723	5444	4/28/17	5/6/17	Scaffold	SC	SAMEA2609466	GCA_900181325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/325/GCA_900181325.1_14936_3_19	-	3189STDY5864776
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08903	39.5	-	FYKW01	67	2295	2075	6/25/17	7/5/17	Contig	SC	SAMEA1026664	GCA_900190145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/145/GCA_900190145.1_6472_7_13	-	UoS2215
Escherichia coli O26:H11 str. 2011C-3274	1446729	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.92997	50.6	-	JAST01	22	6545	5894	6/11/14	3/5/17	Contig	CDC	SAMN02353020	GCA_000703325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/325/GCA_000703325.1_Ec2011C-3274	-	2011C-3274
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39014	65.6	-	MQJO01	5	4262	4103	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010465	GCA_001947125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/125/GCA_001947125.1_ASM194712v1	-	C0014233-2
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.89064	52.2	-	LVFK01	82	5022	4789	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941156	GCA_001594435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/435/GCA_001594435.1_CFSAN033924_01.0	-	CFSAN033924
Staphylococcus aureus DAR1800	1422242	PRJNA228327	228327	Terrabacteria group	Firmicutes	2.93533	32.9	-	JGSG01	9	3097	2924	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403792	GCA_000609705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/705/GCA_000609705.1_Stap_aure_DAR1800_V1	-	DAR1800
Staphylococcus aureus DAR1810	1422243	PRJNA228328	228328	Terrabacteria group	Firmicutes	2.83632	32.8	-	JGSH01	8	2957	2794	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403793	GCA_000609725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/725/GCA_000609725.1_Stap_aure_DAR1810_V1	-	DAR1810
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.89327	52.2	-	LVFI01	74	5022	4786	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941163	GCA_001594445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/445/GCA_001594445.1_CFSAN033931_01.0	-	CFSAN033931
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39398	65.6	-	MQJV01	7	4266	4101	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010472	GCA_001947185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/185/GCA_001947185.1_ASM194718v1	-	I0005720-3
Escherichia coli O128:H2 str. 2011C-3317	1446581	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.59743	50.7	-	JASU01	16	5857	5413	6/11/14	2/23/17	Contig	CDC	SAMN02353022	GCA_000703345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/345/GCA_000703345.1_Ec2011C-3317	-	2011C-3317
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.13898	39.5	-	FYKU01	76	2324	2108	6/25/17	7/5/17	Contig	SC	SAMEA1026315	GCA_900190155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/155/GCA_900190155.1_6472_6_5	-	UoS2054
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.5773	57	-	FXPK01	72	5720	5436	4/28/17	5/6/17	Scaffold	SC	SAMEA2609465	GCA_900181335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/335/GCA_900181335.1_14936_3_18	-	3189STDY5864775
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.8857	56.5	-	FXPL01	142	5975	5635	4/28/17	5/6/17	Scaffold	SC	SAMEA2609467	GCA_900181345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/345/GCA_900181345.1_14936_2_19	-	3189STDY5864872
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08969	39.6	-	FYKN01	56	2283	2060	6/25/17	7/5/17	Contig	SC	SAMEA1026343	GCA_900190165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/165/GCA_900190165.1_6472_6_7	-	UoS2058
Escherichia coli O121:H19 str. 2011C-3609	1446574	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.41269	50.7	-	JASV01	7	5757	5269	6/11/14	2/23/17	Contig	CDC	SAMN02353031	GCA_000703365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/365/GCA_000703365.1_Ec2011C-3609	-	2011C-3609
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38809	65.6	-	MQJY01	15	4264	4095	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010475	GCA_001947195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/195/GCA_001947195.1_ASM194719v1	-	I0005728-6
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93541	52	-	LVFJ01	90	5080	4829	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941160	GCA_001594455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/455/GCA_001594455.1_CFSAN033928_01.0	-	CFSAN033928
Staphylococcus aureus DAR1811	1422244	PRJNA228329	228329	Terrabacteria group	Firmicutes	2.91529	32.8	-	JGSI01	16	3056	2894	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403794	GCA_000609745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/745/GCA_000609745.1_Stap_aure_DAR1811_V1	-	DAR1811
Staphylococcus aureus DAR1813	1422245	PRJNA228330	228330	Terrabacteria group	Firmicutes	2.71553	32.9	-	JGSJ01	2	2830	2644	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403795	GCA_000609765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/765/GCA_000609765.1_Stap_aure_DAR1813_V1	-	DAR1813
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.79455	52.1	-	LVFL01	183	4887	4664	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941155	GCA_001594505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/505/GCA_001594505.1_CFSAN033923_01.0	-	CFSAN033923
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40724	65.6	-	MQKB01	23	4296	4113	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010478	GCA_001947205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/205/GCA_001947205.1_ASM194720v1	-	C0014537-6
Escherichia coli 2-052-05_S4_C2	1444230	PRJNA233887	233887	Proteobacteria	Gammaproteobacteria	5.28768	50.6	-	JNPA01	105	5610	5197	6/11/14	2/23/17	Contig	IGS	SAMN02687477	GCA_000703385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/385/GCA_000703385.1_ASM70338v1	-	2-052-05_S4_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.04298	39.6	-	FYKF01	50	2251	2028	6/25/17	7/5/17	Contig	SC	SAMEA1026489	GCA_900190185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/185/GCA_900190185.1_6472_7_12	-	UoS2210
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.88456	56.5	-	FXOY01	109	5970	5626	4/28/17	5/6/17	Scaffold	SC	SAMEA2609459	GCA_900181355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/355/GCA_900181355.1_14936_3_15	-	3189STDY5864772
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.85118	56.6	-	FXPF01	87	5987	5644	4/28/17	5/6/17	Scaffold	SC	SAMEA2609460	GCA_900181365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/365/GCA_900181365.1_14936_2_16	-	3189STDY5864869
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09369	39.6	-	FYLE01	62	2284	2050	6/25/17	7/5/17	Contig	SC	SAMEA1026635	GCA_900190195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/195/GCA_900190195.1_6472_7_15	-	UoS2217
Escherichia coli 2-177-06_S1_C1	1444040	PRJNA233697	233697	Proteobacteria	Gammaproteobacteria	5.23667	50.6	-	JNPH01	172	5614	5027	6/11/14	2/23/17	Contig	IGS	SAMN02680179	GCA_000703425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/425/GCA_000703425.1_ASM70342v1	-	2-177-06_S1_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38457	65.6	-	MQKF01	2	4259	4099	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010482	GCA_001947215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/215/GCA_001947215.1_ASM194721v1	-	I0003252-9
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.01536	51.9	-	LVFM01	173	5092	4827	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941152	GCA_001594515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/515/GCA_001594515.1_CFSAN033920_01.0	-	CFSAN033920
Staphylococcus aureus DAR1814	1422246	PRJNA228331	228331	Terrabacteria group	Firmicutes	2.77454	32.9	-	JGSK01	7	2888	2715	3/27/14	3/4/17	Scaffold	Broad Institute	SAMN02403796	GCA_000609785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/785/GCA_000609785.1_Stap_aure_DAR1814_V1	-	DAR1814
Staphylococcus aureus DAR1815	1422247	PRJNA228332	228332	Terrabacteria group	Firmicutes	2.76196	32.9	-	JGSL01	4	2863	2719	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403797	GCA_000609805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/805/GCA_000609805.1_Stap_aure_DAR1815_V1	-	DAR1815
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.88878	52.2	-	LVFN01	92	5041	4798	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941148	GCA_001594525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/525/GCA_001594525.1_CFSAN033916_01.0	-	CFSAN033916
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37245	65.6	-	MQKI01	19	4264	4093	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010485	GCA_001947265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/265/GCA_001947265.1_ASM194726v1	-	C0012000-7
Escherichia coli 2-052-05_S4_C3	1444260	PRJNA233917	233917	Proteobacteria	Gammaproteobacteria	4.93694	50.9	-	JNPB01	155	5170	4573	6/11/14	2/23/17	Contig	IGS	SAMN02687505	GCA_000703445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/445/GCA_000703445.1_ASM70344v1	-	2-052-05_S4_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.99248	39.7	-	FYLF01	54	2187	1954	6/25/17	7/5/17	Contig	SC	SAMEA1026671	GCA_900190205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/205/GCA_900190205.1_6472_7_17	-	UoS2227
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.88779	56.5	-	FXPA01	113	5975	5648	4/28/17	5/6/17	Scaffold	SC	SAMEA2609456	GCA_900181375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/375/GCA_900181375.1_14936_3_13	-	3189STDY5864770
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.6034	57	-	FXPP01	41	5678	5413	4/28/17	5/6/17	Scaffold	SC	SAMEA2609468	GCA_900181385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/385/GCA_900181385.1_14936_3_20	-	3189STDY5864777
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05043	39.6	-	FYLG01	50	2212	2006	6/25/17	7/5/17	Contig	SC	SAMEA1026693	GCA_900190215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/215/GCA_900190215.1_6472_7_16	-	UoS2225
Escherichia coli 2-156-04_S1_C3	1444095	PRJNA233752	233752	Proteobacteria	Gammaproteobacteria	4.96724	50.9	-	JNPE01	189	5328	4722	6/11/14	2/23/17	Contig	IGS	SAMN02687539	GCA_000703505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/505/GCA_000703505.1_ASM70350v1	-	2-156-04_S1_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38358	65.6	-	MQKM01	16	4268	4095	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010489	GCA_001947275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/275/GCA_001947275.1_ASM194727v1	-	I0000758-8
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.9012	52.1	-	LVFO01	94	5068	4806	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941144	GCA_001594535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/535/GCA_001594535.1_CFSAN033912_01.0	-	CFSAN033912
Staphylococcus aureus DAR1842	1422248	PRJNA228333	228333	Terrabacteria group	Firmicutes	2.90823	32.9	-	JGSM01	7	3030	2868	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403798	GCA_000609825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/825/GCA_000609825.1_Stap_aure_DAR1842_V1	-	DAR1842
Staphylococcus aureus DAR1859	1422249	PRJNA228334	228334	Terrabacteria group	Firmicutes	2.89875	32.9	-	JGSN01	7	3043	2883	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403799	GCA_000609845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/845/GCA_000609845.1_Stap_aure_DAR1859_V1	-	DAR1859
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.96441	51.9	-	LVFP01	94	5099	4822	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941139	GCA_001594585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/585/GCA_001594585.1_CFSAN033907_01.0	-	CFSAN033907
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38783	65.6	-	MQGC01	15	4269	4097	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010361	GCA_001947305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/305/GCA_001947305.1_ASM194730v1	-	I0001711-6
Escherichia coli 2-156-04_S3_C1	1444120	PRJNA233777	233777	Proteobacteria	Gammaproteobacteria	4.98689	50.5	-	JNPF01	98	5263	4776	6/11/14	2/23/17	Contig	IGS	SAMN02680197	GCA_000703525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/525/GCA_000703525.1_ASM70352v1	-	2-156-04_S3_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10535	39.5	-	FYLH01	46	2313	2082	6/25/17	7/5/17	Contig	SC	SAMEA1026593	GCA_900190225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/225/GCA_900190225.1_6472_7_18	-	UoS2233
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.87975	56.5	-	FXPN01	123	5968	5615	4/28/17	5/6/17	Scaffold	SC	SAMEA2609458	GCA_900181395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/395/GCA_900181395.1_14936_3_14	-	3189STDY5864771
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.83402	56.6	-	FXPM01	69	5905	5578	4/28/17	5/6/17	Scaffold	SC	SAMEA2609470	GCA_900181405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/405/GCA_900181405.1_14936_3_21	-	3189STDY5864778
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05029	39.5	-	FYLK01	63	2196	1970	6/25/17	7/5/17	Contig	SC	SAMEA1026584	GCA_900190245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/245/GCA_900190245.1_6472_7_19	-	UoS2235
Escherichia coli 1-392-07_S3_C1	1444136	PRJNA233793	233793	Proteobacteria	Gammaproteobacteria	4.90589	50.9	-	JNPY01	218	5357	4619	6/11/14	2/23/17	Contig	IGS	SAMN02687518	GCA_000703545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/545/GCA_000703545.1_ASM70354v1	-	1-392-07_S3_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37434	65.6	-	MQGI01	7	4252	4089	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010367	GCA_001947355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/355/GCA_001947355.1_ASM194735v1	-	I0001886-6
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.10138	51.8	-	LVFQ01	112	5249	4976	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941133	GCA_001594595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/595/GCA_001594595.1_CFSAN033901_01.0	-	CFSAN033901
Staphylococcus aureus DAR1862	1422250	PRJNA228335	228335	Terrabacteria group	Firmicutes	2.83847	32.8	-	JGSO01	7	2950	2793	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403800	GCA_000609865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/865/GCA_000609865.1_Stap_aure_DAR1862_V1	-	DAR1862
Staphylococcus aureus DAR1874	1422251	PRJNA228336	228336	Terrabacteria group	Firmicutes	2.75036	32.9	-	JGSP01	4	2827	2670	3/27/14	3/4/17	Scaffold	Broad Institute	SAMN02403801	GCA_000609885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/885/GCA_000609885.1_Stap_aure_DAR1874_V1	-	DAR1874
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.84313	52.2	-	LVFR01	67	4987	4758	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941129	GCA_001594615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/615/GCA_001594615.1_CFSAN033897_01.0	-	CFSAN033897
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38333	65.6	-	MQGM01	2	4259	4098	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010371	GCA_001947365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/365/GCA_001947365.1_ASM194736v1	-	M0007529-2
Escherichia coli 2-177-06_S4_C3	1444262	PRJNA233919	233919	Proteobacteria	Gammaproteobacteria	5.57085	50.6	-	JNPZ01	191	6036	5488	6/11/14	2/23/17	Contig	IGS	SAMN02687506	GCA_000703565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/565/GCA_000703565.1_ASM70356v1	-	2-177-06_S4_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.12453	39.6	-	FYLJ01	58	2347	2115	6/25/17	7/5/17	Contig	SC	SAMEA1026554	GCA_900190255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/255/GCA_900190255.1_6472_7_21	-	UoS2237
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.62561	56.8	-	FXPS01	58	5680	5382	4/28/17	5/6/17	Scaffold	SC	SAMEA2609469	GCA_900181415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/415/GCA_900181415.1_14936_2_20	-	3189STDY5864873
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.59946	57	-	FXPO01	40	5667	5413	4/28/17	5/6/17	Scaffold	SC	SAMEA2609463	GCA_900181425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/425/GCA_900181425.1_14936_3_17	-	3189STDY5864774
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07853	39.6	-	FYLM01	66	2304	2077	6/25/17	7/5/17	Contig	SC	SAMEA1026571	GCA_900190265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/265/GCA_900190265.1_6472_7_22	-	UoS2240
Escherichia coli 2-210-07_S3_C3	1444180	PRJNA233837	233837	Proteobacteria	Gammaproteobacteria	5.39425	50.5	-	JNQA01	341	6103	5285	6/11/14	2/23/17	Contig	IGS	SAMN02687489	GCA_000703585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/585/GCA_000703585.1_ASM70358v1	-	2-210-07_S3_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37878	65.6	-	MQGP01	7	4250	4072	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010374	GCA_001947385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/385/GCA_001947385.1_ASM194738v1	-	I0001905-4
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.78855	52.1	-	LVFS01	99	4887	4640	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941128	GCA_001594625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/625/GCA_001594625.1_CFSAN033896_01.0	-	CFSAN033896
Staphylococcus aureus DAR1883	1422252	PRJNA228337	228337	Terrabacteria group	Firmicutes	2.82073	32.9	-	JGSQ01	10	2931	2764	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403802	GCA_000609905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/905/GCA_000609905.1_Stap_aure_DAR1883_V1	-	DAR1883
Staphylococcus aureus DAR1885	1422253	PRJNA228338	228338	Terrabacteria group	Firmicutes	2.74685	32.8	-	JGSR01	10	2843	2679	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403803	GCA_000609925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/925/GCA_000609925.1_Stap_aure_DAR1885_V1	-	DAR1885
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.00445	51.9	-	LVFT01	89	5140	4887	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941125	GCA_001594665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/665/GCA_001594665.1_CFSAN033893_01.0	-	CFSAN033893
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38531	65.6	-	MQHH01	13	4263	4095	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010392	GCA_001947505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/505/GCA_001947505.1_ASM194750v1	-	I0003417-8
Escherichia coli 2-052-05_S3_C3	1444177	PRJNA233834	233834	Proteobacteria	Gammaproteobacteria	4.9264	50.6	-	JNOZ01	117	5142	4707	6/11/14	2/23/17	Contig	IGS	SAMN02680106	GCA_000703605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/605/GCA_000703605.1_ASM70360v1	-	2-052-05_S3_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.04726	39.6	-	FYLL01	47	2264	2022	6/25/17	7/5/17	Contig	SC	SAMEA1026526	GCA_900190275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/275/GCA_900190275.1_6472_7_24	-	UoS2244
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.60183	57	-	FXPH01	31	5669	5410	4/28/17	5/6/17	Scaffold	SC	SAMEA2609472	GCA_900181435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/435/GCA_900181435.1_14936_3_22	-	3189STDY5864779
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.89334	56.5	-	FXPQ01	125	6003	5607	4/28/17	5/6/17	Scaffold	SC	SAMEA2609462	GCA_900181445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/445/GCA_900181445.1_14936_2_17	-	3189STDY5864870
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.1217	39.6	-	FYLN01	55	2347	2104	6/25/17	7/5/17	Contig	SC	SAMEA1026509	GCA_900190285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/285/GCA_900190285.1_6472_7_23	-	UoS2243
Escherichia coli 2-177-06_S4_C2	1444232	PRJNA233889	233889	Proteobacteria	Gammaproteobacteria	5.06023	50.9	-	JNPN01	113	5352	4978	6/11/14	2/23/17	Contig	IGS	SAMN02680135	GCA_000703625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/625/GCA_000703625.1_ASM70362v1	-	2-177-06_S4_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39113	65.6	-	MQHJ01	3	4273	4104	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010394	GCA_001947515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/515/GCA_001947515.1_ASM194751v1	-	I0003246-1
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.92786	52.2	-	LVFU01	61	5076	4822	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941123	GCA_001594685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/685/GCA_001594685.1_CFSAN033891_01.0	-	CFSAN033891
Staphylococcus aureus DAR1890	1422254	PRJNA228339	228339	Terrabacteria group	Firmicutes	2.71295	32.9	-	JGSS01	5	2798	2639	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403804	GCA_000609945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/945/GCA_000609945.1_Stap_aure_DAR1890_V1	-	DAR1890
Staphylococcus aureus DAR1926	1422255	PRJNA228340	228340	Terrabacteria group	Firmicutes	2.90192	32.8	-	JGST01	14	3049	2882	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403805	GCA_000609965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/965/GCA_000609965.1_Stap_aure_DAR1926_V1	-	DAR1926
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.01277	51.8	-	LVFV01	80	5128	4879	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941122	GCA_001594695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/695/GCA_001594695.1_CFSAN033890_01.0	-	CFSAN033890
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36392	65.5	-	MQHN01	60	4280	4105	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010398	GCA_001947535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/535/GCA_001947535.1_ASM194753v1	-	M0013559-1
Escherichia coli 2-177-06_S3_C1	1444121	PRJNA233778	233778	Proteobacteria	Gammaproteobacteria	5.15375	50.7	-	JNPI01	144	5489	5037	6/11/14	2/23/17	Contig	IGS	SAMN02687494	GCA_000703645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/645/GCA_000703645.1_ASM70364v1	-	2-177-06_S3_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.15319	39.5	-	FYLP01	76	2383	2140	6/25/17	7/5/17	Contig	SC	SAMEA1026644	GCA_900190305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/305/GCA_900190305.1_6472_8_16	-	UoS2300
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	6.07966	56.2	-	FXPR01	466	6315	5609	4/28/17	5/6/17	Scaffold	SC	SAMEA2609471	GCA_900181455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/455/GCA_900181455.1_14936_2_21	-	3189STDY5864874
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.54003	57.1	-	FXPU01	63	5605	5307	4/28/17	5/6/17	Scaffold	SC	SAMEA2609473	GCA_900181465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/465/GCA_900181465.1_14936_2_22	-	3189STDY5864875
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.14544	39.6	-	FYLV01	79	2381	2139	6/25/17	7/5/17	Contig	SC	SAMEA1026666	GCA_900190315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/315/GCA_900190315.1_6472_8_17	-	UoS2305
Escherichia coli 2-156-04_S4_C1	1444203	PRJNA233860	233860	Proteobacteria	Gammaproteobacteria	4.90158	51	-	JNPJ01	164	5168	4609	6/11/14	2/23/17	Contig	IGS	SAMN02680195	GCA_000703665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/665/GCA_000703665.1_ASM70366v1	-	2-156-04_S4_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41379	65.6	-	MQLR01	4	4283	4107	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010404	GCA_001947585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/585/GCA_001947585.1_ASM194758v1	-	I0003474-9
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.01469	51.8	-	LVFW01	75	5136	4893	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941120	GCA_001594715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/715/GCA_001594715.1_CFSAN033888_01.0	-	CFSAN033888
Staphylococcus aureus DAR1936	1422256	PRJNA228341	228341	Terrabacteria group	Firmicutes	2.88619	32.9	-	JGSU01	5	3036	2869	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403806	GCA_000609985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/609/985/GCA_000609985.1_Stap_aure_DAR1936_V1	-	DAR1936
Staphylococcus aureus DAR1937	1422257	PRJNA228342	228342	Terrabacteria group	Firmicutes	2.86396	32.9	-	JGSV01	6	2967	2802	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403807	GCA_000610005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/005/GCA_000610005.1_Stap_aure_DAR1937_V1	-	DAR1937
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.8397	52.2	-	LVFX01	49	4945	4708	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941116	GCA_001594745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/745/GCA_001594745.1_CFSAN033884_01.0	-	CFSAN033884
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39754	65.6	-	MQLV01	10	4272	4110	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010408	GCA_001947595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/595/GCA_001947595.1_ASM194759v1	-	I0004247-8
Escherichia coli 2-177-06_S1_C3	1444096	PRJNA233753	233753	Proteobacteria	Gammaproteobacteria	5.23286	50.5	-	JNPM01	146	5628	5048	6/11/14	2/23/17	Contig	IGS	SAMN02680242	GCA_000703685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/685/GCA_000703685.1_ASM70368v1	-	2-177-06_S1_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.98136	39.7	-	FYMU01	27	2190	1979	6/25/17	7/5/17	Contig	SC	SAMEA1026505	GCA_900190325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/325/GCA_900190325.1_6472_8_3	-	UoS2254
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.82857	56.6	-	FXPT01	86	5907	5556	4/28/17	5/6/17	Scaffold	SC	SAMEA2609474	GCA_900181475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/475/GCA_900181475.1_14936_3_23	-	3189STDY5864780
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.60246	57	-	FXPW01	34	5670	5419	4/28/17	5/6/17	Scaffold	SC	SAMEA2609476	GCA_900181485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/485/GCA_900181485.1_14936_3_24	-	3189STDY5864781
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.97694	39.7	-	FYLR01	45	2200	1956	6/25/17	7/5/17	Contig	SC	SAMEA1026656	GCA_900190365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/365/GCA_900190365.1_6512_2_2	-	UoS3093
Escherichia coli 2-177-06_S1_C2	1444068	PRJNA233725	233725	Proteobacteria	Gammaproteobacteria	5.29213	50.5	-	JNPL01	145	5690	5094	6/11/14	2/23/17	Contig	IGS	SAMN02687471	GCA_000703705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/705/GCA_000703705.1_ASM70370v1	-	2-177-06_S1_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39693	65.6	-	MQLU01	14	4286	4105	1/11/17	3/14/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010407	GCA_001947605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/605/GCA_001947605.1_ASM194760v1	-	C0010357-3
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.91817	52.1	-	LVFY01	74	5045	4785	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941115	GCA_001594765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/765/GCA_001594765.1_CFSAN033883_01.0	-	CFSAN033883
Staphylococcus aureus DAR1938	1422258	PRJNA228344	228344	Terrabacteria group	Firmicutes	2.85237	32.9	-	JGSW01	9	2982	2819	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403808	GCA_000610025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/025/GCA_000610025.1_Stap_aure_DAR1938_V1	-	DAR1938
Staphylococcus aureus DAR1939	1422259	PRJNA228345	228345	Terrabacteria group	Firmicutes	2.96104	33	-	JGSX01	9	3109	2942	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403809	GCA_000610045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/045/GCA_000610045.1_Stap_aure_DAR1939_V1	-	DAR1939
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.9281	52.2	-	LVFZ01	62	5082	4824	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941114	GCA_001594775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/775/GCA_001594775.1_CFSAN033882_01.0	-	CFSAN033882
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37434	65.6	-	MQMB01	14	4257	4084	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010414	GCA_001947665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/665/GCA_001947665.1_ASM194766v1	-	I0004216-3
Escherichia coli 2-156-04_S3_C2	1444150	PRJNA233807	233807	Proteobacteria	Gammaproteobacteria	4.98102	50.3	-	JNPK01	87	5046	4677	6/11/14	2/23/17	Contig	IGS	SAMN02680254	GCA_000703725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/725/GCA_000703725.1_ASM70372v1	-	2-156-04_S3_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08648	39.6	-	FYMJ01	53	2257	2067	6/25/17	7/5/17	Contig	SC	SAMEA1026504	GCA_900190375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/375/GCA_900190375.1_6472_8_7	-	UoS2271
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.70902	57	-	FXPV01	99	5755	5429	4/28/17	5/6/17	Scaffold	SC	SAMEA2609477	GCA_900181495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/495/GCA_900181495.1_14936_2_24	-	3189STDY5864877
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.83094	56.6	-	FXPX01	81	5895	5579	4/28/17	5/6/17	Scaffold	SC	SAMEA2609478	GCA_900181505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/505/GCA_900181505.1_14936_3_25	-	3189STDY5864782
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.13058	39.5	-	FYME01	56	2359	2107	6/25/17	7/5/17	Contig	SC	SAMEA1026840	GCA_900190395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/395/GCA_900190395.1_6593_2_7	-	UoS2337
Escherichia coli 2-156-04_S3_C3	1444178	PRJNA233835	233835	Proteobacteria	Gammaproteobacteria	5.23984	50.7	-	JNPG01	130	5520	5013	6/11/14	2/23/17	Contig	IGS	SAMN02687520	GCA_000703745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/745/GCA_000703745.1_ASM70374v1	-	2-156-04_S3_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34695	65.6	-	MQHV01	24	4242	4078	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010420	GCA_001947675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/675/GCA_001947675.1_ASM194767v1	-	I0003844-3
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.97476	52.1	-	LVGA01	72	5155	4887	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941113	GCA_001594795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/795/GCA_001594795.1_CFSAN033881_01.0	-	CFSAN033881
Staphylococcus aureus DAR1941	1422260	PRJNA228346	228346	Terrabacteria group	Firmicutes	2.77577	32.8	-	JGSY01	8	2897	2734	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403810	GCA_000610065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/065/GCA_000610065.1_Stap_aure_DAR1941_V1	-	DAR1941
Staphylococcus aureus DAR1942	1422261	PRJNA228348	228348	Terrabacteria group	Firmicutes	2.75506	32.8	-	JGSZ01	4	2851	2687	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403811	GCA_000610085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/085/GCA_000610085.1_Stap_aure_DAR1942_V1	-	DAR1942
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.91534	52.2	-	LVGB01	64	5051	4821	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941112	GCA_001594825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/825/GCA_001594825.1_CFSAN033880_01.0	-	CFSAN033880
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3666	65.6	-	MQHS01	49	4287	4098	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010417	GCA_001947685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/685/GCA_001947685.1_ASM194768v1	-	I0003780-9
Escherichia coli 2-210-07_S1_C3	1444097	PRJNA233754	233754	Proteobacteria	Gammaproteobacteria	5.21487	50.9	-	JNPO01	169	5491	4960	6/11/14	2/23/17	Contig	IGS	SAMN02680140	GCA_000703765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/765/GCA_000703765.1_ASM70376v1	-	2-210-07_S1_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.11399	39.5	-	FYMH01	58	2328	2094	6/25/17	7/5/17	Contig	SC	SAMEA1026494	GCA_900190405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/405/GCA_900190405.1_6472_8_21	-	UoS2311
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.92309	56.5	-	FXPY01	101	6073	5713	4/28/17	5/6/17	Scaffold	SC	SAMEA2609479	GCA_900181515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/515/GCA_900181515.1_14936_3_26	-	3189STDY5864783
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.71407	57	-	FXPZ01	97	5755	5426	4/28/17	5/6/17	Scaffold	SC	SAMEA2609480	GCA_900181525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/525/GCA_900181525.1_14936_2_25	-	3189STDY5864878
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05316	39.6	-	FYLY01	48	2238	2031	6/25/17	7/5/17	Contig	SC	SAMEA1026333	GCA_900190425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/425/GCA_900190425.1_6472_8_14	-	UoS2297
Escherichia coli 1-392-07_S3_C2	1444164	PRJNA233821	233821	Proteobacteria	Gammaproteobacteria	4.90665	50.9	-	JNPP01	216	5378	4663	6/11/14	2/23/17	Contig	IGS	SAMN02680159	GCA_000703785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/785/GCA_000703785.1_ASM70378v1	-	1-392-07_S3_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37974	65.6	-	MQHZ01	4	4254	4097	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010424	GCA_001947705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/705/GCA_001947705.1_ASM194770v1	-	M0017218-0
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.91576	52.2	-	LVGC01	70	5054	4820	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941111	GCA_001594845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/845/GCA_001594845.1_CFSAN033879_01.0	-	CFSAN033879
Staphylococcus aureus DAR1954	1422262	PRJNA228350	228350	Terrabacteria group	Firmicutes	2.83699	32.9	-	JGTA01	12	2957	2790	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403812	GCA_000610105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/105/GCA_000610105.1_Stap_aure_DAR1954_V1	-	DAR1954
Staphylococcus aureus DAR1955	1422263	PRJNA228351	228351	Terrabacteria group	Firmicutes	2.92125	32.9	-	JGTB01	11	3089	2929	3/27/14	3/4/17	Scaffold	Broad Institute	SAMN02403813	GCA_000610125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/125/GCA_000610125.1_Stap_aure_DAR1955_V1	-	DAR1955
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.88751	52.2	-	LVGD01	51	5018	4775	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941109	GCA_001594855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/855/GCA_001594855.1_CFSAN033877_01.0	-	CFSAN033877
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38541	65.6	-	MQIC01	30	4272	4095	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010427	GCA_001947745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/745/GCA_001947745.1_ASM194774v1	-	I0004050-6
Escherichia coli 2-005-03_S3_C1	1444117	PRJNA233774	233774	Proteobacteria	Gammaproteobacteria	5.29938	50.7	-	JNPQ01	168	5678	5180	6/11/14	2/23/17	Contig	IGS	SAMN02687479	GCA_000703805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/805/GCA_000703805.1_ASM70380v1	-	2-005-03_S3_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09981	39.5	-	FYMZ01	61	2291	2054	6/25/17	7/5/17	Contig	SC	SAMEA1026316	GCA_900190435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/435/GCA_900190435.1_6472_8_15	-	UoS2298
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.92126	56.5	-	FXQD01	107	6061	5721	4/28/17	5/6/17	Scaffold	SC	SAMEA2609483	GCA_900181535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/535/GCA_900181535.1_14936_3_28	-	3189STDY5864785
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.61828	57	-	FXQC01	98	5666	5359	4/28/17	5/6/17	Scaffold	SC	SAMEA2609486	GCA_900181545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/545/GCA_900181545.1_14936_2_28	-	3189STDY5864881
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.11855	39.6	-	FYMA01	65	2353	2091	6/25/17	7/5/17	Contig	SC	SAMEA1026453	GCA_900190445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/445/GCA_900190445.1_6593_2_1	-	UoS2323
Escherichia coli 2-005-03_S3_C3	1444175	PRJNA233832	233832	Proteobacteria	Gammaproteobacteria	5.33791	50.6	-	JNPR01	168	5774	5250	6/11/14	2/23/17	Contig	IGS	SAMN02687504	GCA_000703825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/825/GCA_000703825.1_ASM70382v1	-	2-005-03_S3_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40144	65.6	-	MQII01	25	4294	4119	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010433	GCA_001947755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/755/GCA_001947755.1_ASM194775v1	-	I0004478-9
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.89379	52.2	-	LVGE01	74	5047	4796	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941108	GCA_001594875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/875/GCA_001594875.1_CFSAN033876_01.0	-	CFSAN033876
Staphylococcus aureus DAR1956	1422264	PRJNA228352	228352	Terrabacteria group	Firmicutes	2.88518	32.9	-	JGTC01	13	3012	2850	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403814	GCA_000610145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/145/GCA_000610145.1_Stap_aure_DAR1956_V1	-	DAR1956
Staphylococcus aureus DAR1961	1422265	PRJNA228353	228353	Terrabacteria group	Firmicutes	2.90051	32.8	-	JGTD01	10	3047	2874	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403815	GCA_000610165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/165/GCA_000610165.1_Stap_aure_DAR1961_V1	-	DAR1961
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.1862	52	-	LVGF01	175	5438	5139	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941106	GCA_001594905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/905/GCA_001594905.1_CFSAN033874_01.0	-	CFSAN033874
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37871	65.6	-	MQIR01	8	4272	4115	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010442	GCA_001947805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/805/GCA_001947805.1_ASM194780v1	-	I0004426-8
Escherichia coli 2-005-03_S4_C1	1444200	PRJNA233857	233857	Proteobacteria	Gammaproteobacteria	5.26683	50.7	-	JNPS01	235	5852	5177	6/11/14	2/23/17	Contig	IGS	SAMN02680138	GCA_000703845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/845/GCA_000703845.1_ASM70384v1	-	2-005-03_S4_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.14017	39.6	-	FYMQ01	69	2371	2131	6/25/17	7/5/17	Contig	SC	SAMEA1026696	GCA_900190455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/455/GCA_900190455.1_6472_8_20	-	UoS2308
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.91045	56.5	-	FXQA01	124	6030	5711	4/28/17	5/6/17	Scaffold	SC	SAMEA2609481	GCA_900181555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/555/GCA_900181555.1_14936_3_27	-	3189STDY5864784
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.78293	56.7	-	FXQY01	81	5903	5554	4/28/17	5/6/17	Scaffold	SC	SAMEA2609490	GCA_900181575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/575/GCA_900181575.1_14936_2_30	-	3189STDY5864883
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.04399	39.5	-	FYLO01	39	2241	2015	6/25/17	7/5/17	Contig	SC	SAMEA1026493	GCA_900190465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/465/GCA_900190465.1_6472_8_6	-	UoS2261
Escherichia coli 1-392-07_S1_C1	1444053	PRJNA233710	233710	Proteobacteria	Gammaproteobacteria	5.42299	50.4	-	JNPT01	174	5775	5269	6/11/14	2/23/17	Contig	IGS	SAMN02680099	GCA_000703865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/865/GCA_000703865.1_ASM70386v1	-	1-392-07_S1_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3975	65.6	-	MQIU01	5	4273	4106	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010445	GCA_001947815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/815/GCA_001947815.1_ASM194781v1	-	M0018715-4
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.09733	52	-	LVGG01	135	5311	5041	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941105	GCA_001594915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/915/GCA_001594915.1_CFSAN033873_01.0	-	CFSAN033873
Staphylococcus aureus DAR1980	1422266	PRJNA228354	228354	Terrabacteria group	Firmicutes	2.942	33	-	JGTE01	11	3090	2924	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403816	GCA_000610185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/185/GCA_000610185.1_Stap_aure_DAR1980_V1	-	DAR1980
Staphylococcus aureus DAR1995	1422267	PRJNA228355	228355	Terrabacteria group	Firmicutes	2.89018	32.9	-	JGTF01	4	3029	2866	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403817	GCA_000610205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/205/GCA_000610205.1_Stap_aure_DAR1995_V1	-	DAR1995
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.19093	51.9	-	LVGH01	121	5426	5142	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941104	GCA_001594935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/935/GCA_001594935.1_CFSAN033872_01.0	-	CFSAN033872
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37862	65.6	-	MQIO01	5	4257	4094	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010439	GCA_001947825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/825/GCA_001947825.1_ASM194782v1	-	M0018310-4
Escherichia coli 1-392-07_S1_C2	1444081	PRJNA233738	233738	Proteobacteria	Gammaproteobacteria	5.49027	50.4	-	JNPU01	138	5816	5332	6/11/14	2/23/17	Contig	IGS	SAMN02680262	GCA_000703885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/885/GCA_000703885.1_ASM70388v1	-	1-392-07_S1_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08199	39.7	-	FYLT01	68	2296	2061	6/25/17	7/5/17	Contig	SC	SAMEA1026513	GCA_900190475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/475/GCA_900190475.1_6472_8_10	-	UoS2280
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.7773	56.7	-	FXQB01	84	5883	5553	4/28/17	5/6/17	Scaffold	SC	SAMEA2609492	GCA_900181585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/585/GCA_900181585.1_14936_2_31	-	3189STDY5864884
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.56028	57.1	-	FXQN01	69	5696	5382	4/28/17	5/6/17	Scaffold	SC	SAMEA2609491	GCA_900181595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/595/GCA_900181595.1_14936_3_32	-	3189STDY5864789
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.04235	39.6	-	FYMS01	49	2248	2004	6/25/17	7/5/17	Contig	SC	SAMEA1026774	GCA_900190485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/485/GCA_900190485.1_6593_2_2	-	UoS2324
Escherichia coli 2-210-07_S1_C2	1444069	PRJNA233726	233726	Proteobacteria	Gammaproteobacteria	5.15546	50.8	-	JNPV01	197	5457	4922	6/11/14	2/23/17	Contig	IGS	SAMN02680198	GCA_000703905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/905/GCA_000703905.1_ASM70390v1	-	2-210-07_S1_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39156	65.6	-	MQIL01	12	4267	4095	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010436	GCA_001947865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/865/GCA_001947865.1_ASM194786v1	-	M0018174-4
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.17595	52	-	LVGI01	124	5414	5133	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941103	GCA_001594955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/955/GCA_001594955.1_CFSAN033871_01.0	-	CFSAN033871
Staphylococcus aureus DAR2000	1422268	PRJNA228356	228356	Terrabacteria group	Firmicutes	2.87049	32.8	-	JGTG01	9	3004	2827	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403818	GCA_000610225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/225/GCA_000610225.1_Stap_aure_DAR2000_V1	-	DAR2000
Staphylococcus aureus DAR2002	1422269	PRJNA228357	228357	Terrabacteria group	Firmicutes	2.764	32.9	-	JGTH01	2	2870	2704	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403819	GCA_000610245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/245/GCA_000610245.1_Stap_aure_DAR2002_V1	-	DAR2002
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.05602	51.8	-	LVGJ01	260	5129	4876	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941102	GCA_001594985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/985/GCA_001594985.1_CFSAN033870_01.0	-	CFSAN033870
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38791	65.6	-	MQJC01	10	4260	4095	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010453	GCA_001947895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/895/GCA_001947895.1_ASM194789v1	-	I0003711-4
Escherichia coli 2-210-07_S4_C1	1444205	PRJNA233862	233862	Proteobacteria	Gammaproteobacteria	4.97431	50.4	-	JNPW01	85	5212	4716	6/11/14	2/23/17	Contig	IGS	SAMN02687528	GCA_000703925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/925/GCA_000703925.1_ASM70392v1	-	2-210-07_S4_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03328	39.6	-	FYLZ01	38	2240	2009	6/25/17	7/5/17	Contig	SC	SAMEA1026483	GCA_900190495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/495/GCA_900190495.1_6472_8_8	-	UoS2275
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.47769	57.3	-	FXQE01	37	5530	5272	4/28/17	5/6/17	Scaffold	SC	SAMEA2609484	GCA_900181605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/605/GCA_900181605.1_14936_3_29	-	3189STDY5864786
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.57119	57.1	-	FXQF01	70	5708	5400	4/28/17	5/6/17	Scaffold	SC	SAMEA2609489	GCA_900181615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/615/GCA_900181615.1_14936_3_31	-	3189STDY5864788
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06467	39.5	-	FYMV01	66	2254	2025	6/25/17	7/5/17	Contig	SC	SAMEA1026545	GCA_900190505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/505/GCA_900190505.1_6472_8_12	-	UoS2288
Escherichia coli 2-210-07_S3_C2	1444152	PRJNA233809	233809	Proteobacteria	Gammaproteobacteria	5.16928	50.7	-	JNPX01	243	5626	4951	6/11/14	2/23/17	Contig	IGS	SAMN02680129	GCA_000703945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/945/GCA_000703945.1_ASM70394v1	-	2-210-07_S3_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35693	65.6	-	MQJF01	31	4268	4092	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010456	GCA_001947905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/905/GCA_001947905.1_ASM194790v1	-	I0003367-5
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.19231	51.9	-	LVGK01	242	5425	5122	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941101	GCA_001594995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/594/995/GCA_001594995.1_CFSAN033869_01.0	-	CFSAN033869
Staphylococcus aureus DAR2018	1422270	PRJNA228358	228358	Terrabacteria group	Firmicutes	2.99948	32.8	-	JGTI01	10	3160	2989	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403820	GCA_000610265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/265/GCA_000610265.1_Stap_aure_DAR2018_V1	-	DAR2018
Staphylococcus aureus DAR2019	1422271	PRJNA228359	228359	Terrabacteria group	Firmicutes	2.89034	32.8	-	JGTJ01	11	3034	2869	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403821	GCA_000610285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/285/GCA_000610285.1_Stap_aure_DAR2019_V1	-	DAR2019
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.14185	52.1	-	LVGL01	407	5278	5011	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941099	GCA_001595015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/015/GCA_001595015.1_CFSAN033867_01.0	-	CFSAN033867
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41408	65.6	-	MQJI01	12	4291	4118	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010459	GCA_001947915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/915/GCA_001947915.1_ASM194791v1	-	I0005346-7
Escherichia coli 2-222-05_S1_C1	1444041	PRJNA233698	233698	Proteobacteria	Gammaproteobacteria	4.96501	50.5	-	JNQK01	108	5279	4811	6/11/14	2/23/17	Contig	IGS	SAMN02680155	GCA_000703965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/965/GCA_000703965.1_ASM70396v1	-	2-222-05_S1_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.02489	39.6	-	FYMB01	64	2194	1982	6/25/17	7/5/17	Contig	SC	SAMEA1026463	GCA_900190525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/525/GCA_900190525.1_6472_8_23	-	UoS2316
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.91171	56.5	-	FXQH01	127	6054	5709	4/28/17	5/6/17	Scaffold	SC	SAMEA2609493	GCA_900181625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/625/GCA_900181625.1_14936_3_33	-	3189STDY5864790
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.83002	56.6	-	FXQG01	85	5901	5557	4/28/17	5/6/17	Scaffold	SC	SAMEA2609496	GCA_900181635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/635/GCA_900181635.1_14936_3_34	-	3189STDY5864791
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05493	39.6	-	FYMN01	43	2277	2052	6/25/17	7/5/17	Contig	SC	SAMEA1026648	GCA_900190535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/535/GCA_900190535.1_6472_8_18	-	UoS2306
Escherichia coli 2-210-07_S4_C3	1444263	PRJNA233920	233920	Proteobacteria	Gammaproteobacteria	4.91117	50.9	-	JNQJ01	185	5246	4706	6/11/14	2/23/17	Contig	IGS	SAMN02680136	GCA_000703985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/703/985/GCA_000703985.1_ASM70398v1	-	2-210-07_S4_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36656	65.6	-	MQJP01	17	4269	4097	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010466	GCA_001947975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/975/GCA_001947975.1_ASM194797v1	-	I0004564-6
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.04305	52	-	LVGM01	385	5165	4910	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941098	GCA_001595035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/035/GCA_001595035.1_CFSAN033866_01.0	-	CFSAN033866
Staphylococcus aureus DAR2026	1422272	PRJNA228360	228360	Terrabacteria group	Firmicutes	2.8774	32.9	-	JGTK01	4	3006	2838	3/27/14	3/4/17	Scaffold	Broad Institute	SAMN02403822	GCA_000610305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/305/GCA_000610305.1_Stap_aure_DAR2026_V1	-	DAR2026
Staphylococcus aureus DAR2067	1422273	PRJNA228361	228361	Terrabacteria group	Firmicutes	2.87482	32.8	-	JGTL01	11	3019	2863	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403823	GCA_000610325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/325/GCA_000610325.1_Stap_aure_DAR2067_V1	-	DAR2067
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.78706	52.2	-	LVGN01	165	4850	4626	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941097	GCA_001595065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/065/GCA_001595065.1_CFSAN033865_01.0	-	CFSAN033865
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39058	65.6	-	MQJS01	26	4285	4105	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010469	GCA_001947985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/985/GCA_001947985.1_ASM194798v1	-	I0004768-3
Escherichia coli 2-177-06_S3_C2	1444151	PRJNA233808	233808	Proteobacteria	Gammaproteobacteria	5.3603	50.6	-	JNQF01	181	5639	5097	6/11/14	2/23/17	Contig	IGS	SAMN02680141	GCA_000704005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/005/GCA_000704005.1_ASM70400v1	-	2-177-06_S3_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03957	39.6	-	FYMX01	51	2230	2014	6/25/17	7/5/17	Contig	SC	SAMEA1026806	GCA_900190545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/545/GCA_900190545.1_6593_2_4	-	UoS2329
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.76376	56.7	-	FXQL01	81	5857	5541	4/28/17	5/6/17	Scaffold	SC	SAMEA2609495	GCA_900181655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/655/GCA_900181655.1_14936_2_33	-	3189STDY5864886
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.47527	57.2	-	FXQJ01	35	5537	5274	4/28/17	5/6/17	Scaffold	SC	SAMEA2609487	GCA_900181665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/665/GCA_900181665.1_14936_3_30	-	3189STDY5864787
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10766	39.5	-	FYLQ01	53	2327	2095	6/25/17	7/5/17	Contig	SC	SAMEA1026658	GCA_900190555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/555/GCA_900190555.1_6593_2_14	-	UoS2359
Escherichia coli 2-156-04_S4_C2	1444231	PRJNA233888	233888	Proteobacteria	Gammaproteobacteria	5.09578	50.9	-	JNQD01	215	5440	4699	6/11/14	2/23/17	Contig	IGS	SAMN02687538	GCA_000704025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/025/GCA_000704025.1_ASM70402v1	-	2-156-04_S4_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38525	65.6	-	MQJT01	14	4263	4093	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010470	GCA_001947995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/995/GCA_001947995.1_ASM194799v1	-	I0005404-4
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74841	52.2	-	LVGO01	199	4847	4621	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941096	GCA_001595075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/075/GCA_001595075.1_CFSAN033864_01.0	-	CFSAN033864
Staphylococcus aureus DAR2068	1422274	PRJNA228362	228362	Terrabacteria group	Firmicutes	2.81538	32.9	-	JGTM01	9	2925	2757	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403824	GCA_000610345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/345/GCA_000610345.1_Stap_aure_DAR2068_V1	-	DAR2068
Staphylococcus aureus DAR2072	1422276	PRJNA228364	228364	Terrabacteria group	Firmicutes	2.90867	32.9	-	JGTN01	12	3060	2892	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403826	GCA_000610365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/365/GCA_000610365.1_Stap_aure_DAR2072_V1	-	DAR2072
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.00021	52.1	-	LVGP01	114	5175	4908	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941095	GCA_001595105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/105/GCA_001595105.1_CFSAN033863_01.0	-	CFSAN033863
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40132	65.6	-	MQJW01	17	4291	4112	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010473	GCA_001948055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/055/GCA_001948055.1_ASM194805v1	-	I0005700-5
Escherichia coli 2-316-03_S3_C1	1444124	PRJNA233781	233781	Proteobacteria	Gammaproteobacteria	5.07578	51	-	JNQP01	151	5325	4803	6/11/14	2/23/17	Contig	IGS	SAMN02680243	GCA_000704045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/045/GCA_000704045.1_ASM70404v1	-	2-316-03_S3_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.02683	39.6	-	FYML01	63	2213	1999	6/25/17	7/5/17	Contig	SC	SAMEA1026818	GCA_900190565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/565/GCA_900190565.1_6593_2_5	-	UoS2333
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.61818	57	-	FXQI01	92	5664	5356	4/28/17	5/6/17	Scaffold	SC	SAMEA2609499	GCA_900181675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/675/GCA_900181675.1_14936_2_35	-	3189STDY5864888
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.66644	56.8	-	FXQK01	58	5782	5490	4/28/17	5/6/17	Scaffold	SC	SAMEA2609500	GCA_900181685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/685/GCA_900181685.1_14936_3_36	-	3189STDY5864793
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10511	39.5	-	FYMM01	53	2310	2089	6/25/17	7/5/17	Contig	SC	SAMEA1026677	GCA_900190575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/575/GCA_900190575.1_6472_8_19	-	UoS2307
Escherichia coli 2-316-03_S3_C2	1444154	PRJNA233811	233811	Proteobacteria	Gammaproteobacteria	4.98308	50.8	-	JNQQ01	116	5199	4785	6/11/14	2/23/17	Contig	IGS	SAMN02680157	GCA_000704065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/065/GCA_000704065.1_ASM70406v1	-	2-316-03_S3_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39988	65.6	-	MQKJ01	22	4289	4113	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010486	GCA_001948125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/125/GCA_001948125.1_ASM194812v1	-	C0012430-6
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.78145	52.1	-	LVGQ01	47	4846	4638	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941094	GCA_001595115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/115/GCA_001595115.1_CFSAN033862_01.0	-	CFSAN033862
Staphylococcus aureus DAR2075	1422277	PRJNA228365	228365	Terrabacteria group	Firmicutes	2.87894	32.9	-	JGTO01	11	3015	2846	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403827	GCA_000610385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/385/GCA_000610385.1_Stap_aure_DAR2075_V1	-	DAR2075
Staphylococcus aureus DAR3143	1422278	PRJNA228366	228366	Terrabacteria group	Firmicutes	2.9619	33	-	JGTP01	7	3093	2900	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403828	GCA_000610405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/405/GCA_000610405.1_Stap_aure_DAR3143_V1	-	DAR3143
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.9248	52.1	-	LVGR01	110	5058	4809	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941093	GCA_001595145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/145/GCA_001595145.1_CFSAN033861_01.0	-	CFSAN033861
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38601	65.6	-	MQKN01	2	4259	4096	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010491	GCA_001948135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/135/GCA_001948135.1_ASM194813v1	-	I0003126-5
Escherichia coli 2-316-03_S3_C3	1444182	PRJNA233839	233839	Proteobacteria	Gammaproteobacteria	4.81586	50.8	-	JNQR01	119	5041	4630	6/11/14	2/23/17	Contig	IGS	SAMN02680240	GCA_000704085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/085/GCA_000704085.1_ASM70408v1	-	2-316-03_S3_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05889	39.5	-	FYMO01	69	2246	2024	6/25/17	7/5/17	Contig	SC	SAMEA1026791	GCA_900190585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/585/GCA_900190585.1_6593_2_3	-	UoS2325
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.85637	56.5	-	FXQS01	141	5984	5567	4/28/17	5/6/17	Scaffold	SC	SAMEA2609498	GCA_900181705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/705/GCA_900181705.1_14936_3_35	-	3189STDY5864792
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.62425	56.8	-	FXQM01	61	5675	5383	4/28/17	5/6/17	Scaffold	SC	SAMEA2609504	GCA_900181715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/715/GCA_900181715.1_14936_2_38	-	3189STDY5864891
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.0886	39.5	-	FYMY01	55	2282	2069	6/25/17	7/5/17	Contig	SC	SAMEA1026325	GCA_900190595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/595/GCA_900190595.1_6593_2_11	-	UoS2346
Escherichia coli 2-156-04_S4_C3	1444261	PRJNA233918	233918	Proteobacteria	Gammaproteobacteria	4.91194	50.9	-	JNQE01	183	5275	4727	6/11/14	2/23/17	Contig	IGS	SAMN02687516	GCA_000704105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/105/GCA_000704105.1_ASM70410v1	-	2-156-04_S4_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39371	65.6	-	MQGD01	2	4263	4106	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010362	GCA_001948155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/155/GCA_001948155.1_ASM194815v1	-	I0001224-0
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.00112	52.1	-	LVGS01	136	5163	4891	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941092	GCA_001595155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/155/GCA_001595155.1_CFSAN033860_01.0	-	CFSAN033860
Staphylococcus aureus DAR3144	1422279	PRJNA228367	228367	Terrabacteria group	Firmicutes	2.99225	32.9	-	JGTQ01	19	3174	2987	3/27/14	3/4/17	Scaffold	Broad Institute	SAMN02403829	GCA_000610425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/425/GCA_000610425.1_Stap_aure_DAR3144_V1	-	DAR3144
Staphylococcus aureus DAR3148	1422280	PRJNA228368	228368	Terrabacteria group	Firmicutes	2.92654	32.9	-	JGTR01	11	3091	2908	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403830	GCA_000610445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/445/GCA_000610445.1_Stap_aure_DAR3148_V1	-	DAR3148
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.94274	52.1	-	LVGT01	106	5125	4861	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941090	GCA_001595185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/185/GCA_001595185.1_CFSAN033858_01.0	-	CFSAN033858
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40045	65.6	-	MQGG01	37	4293	4131	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010365	GCA_001948205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/205/GCA_001948205.1_ASM194820v1	-	I0001410-5
Escherichia coli 2-222-05_S1_C2	1444070	PRJNA233727	233727	Proteobacteria	Gammaproteobacteria	4.93167	50.6	-	JNQL01	106	5254	4781	6/11/14	2/23/17	Contig	IGS	SAMN02680216	GCA_000704125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/125/GCA_000704125.1_ASM70412v1	-	2-222-05_S1_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05237	39.5	-	FYLW01	50	2226	2009	6/25/17	7/5/17	Contig	SC	SAMEA1026561	GCA_900190605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/605/GCA_900190605.1_6472_8_11	-	UoS2287
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.66674	56.8	-	FXQU01	55	5792	5492	4/28/17	5/6/17	Scaffold	SC	SAMEA2609505	GCA_900181725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/725/GCA_900181725.1_14936_3_38	-	3189STDY5864795
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.6204	57	-	FXQX01	99	5671	5358	4/28/17	5/6/17	Scaffold	SC	SAMEA2609501	GCA_900181735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/735/GCA_900181735.1_14936_2_36	-	3189STDY5864889
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.01804	39.7	-	FYMR01	48	2220	2008	6/25/17	7/5/17	Contig	SC	SAMEA1026477	GCA_900190615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/615/GCA_900190615.1_6472_8_22	-	UoS2315
Escherichia coli 2-222-05_S3_C3	1444181	PRJNA233838	233838	Proteobacteria	Gammaproteobacteria	5.47113	50.7	-	JNQN01	210	5908	5295	6/11/14	2/23/17	Contig	IGS	SAMN02680102	GCA_000704145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/145/GCA_000704145.1_ASM70414v1	-	2-222-05_S3_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3771	65.6	-	MQGJ01	7	4267	4108	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010368	GCA_001948215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/215/GCA_001948215.1_ASM194821v1	-	I0002394-0
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.77671	52.1	-	LVGU01	89	4904	4664	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941089	GCA_001595195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/195/GCA_001595195.1_CFSAN033857_01.0	-	CFSAN033857
Staphylococcus aureus DAR3150	1422281	PRJNA228369	228369	Terrabacteria group	Firmicutes	3.02375	33.1	-	JGTS01	13	3189	2986	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403831	GCA_000610465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/465/GCA_000610465.1_Stap_aure_DAR3150_V1	-	DAR3150
Staphylococcus aureus DAR3152	1422282	PRJNA228370	228370	Terrabacteria group	Firmicutes	2.98104	33	-	JGTT01	16	3135	2945	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403832	GCA_000610485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/485/GCA_000610485.1_Stap_aure_DAR3152_V1	-	DAR3152
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.94459	52.1	-	LVGV01	87	5098	4844	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941088	GCA_001595225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/225/GCA_001595225.1_CFSAN033856_01.0	-	CFSAN033856
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.33595	65.6	-	MQGQ01	26	4229	4059	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010375	GCA_001948255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/255/GCA_001948255.1_ASM194825v1	-	I0002664-6
Escherichia coli 2-222-05_S4_C2	1444234	PRJNA233891	233891	Proteobacteria	Gammaproteobacteria	5.2567	50.4	-	JNQO01	171	5716	5128	6/11/14	2/25/17	Contig	IGS	SAMN02680255	GCA_000704165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/165/GCA_000704165.1_ASM70416v1	-	2-222-05_S4_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.98769	39.7	-	FYMF01	59	2178	1959	6/25/17	7/5/17	Contig	SC	SAMEA1026790	GCA_900190625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/625/GCA_900190625.1_6512_2_7	-	UoS3115
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.67069	56.8	-	FXQT01	45	5780	5497	4/28/17	5/6/17	Scaffold	SC	SAMEA2609503	GCA_900181745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/745/GCA_900181745.1_14936_3_37	-	3189STDY5864794
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.62575	56.8	-	FXQQ01	58	5683	5385	4/28/17	5/6/17	Scaffold	SC	SAMEA2609506	GCA_900181765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/765/GCA_900181765.1_14936_2_39	-	3189STDY5864892
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07297	39.5	-	FYMW01	47	2277	2044	6/25/17	7/5/17	Contig	SC	SAMEA1026363	GCA_900190635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/635/GCA_900190635.1_6593_2_8	-	UoS2338
Escherichia coli 2-210-07_S4_C2	1444233	PRJNA233890	233890	Proteobacteria	Gammaproteobacteria	4.92352	50.9	-	JNQI01	187	5247	4708	6/11/14	2/23/17	Contig	IGS	SAMN02680252	GCA_000704185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/185/GCA_000704185.1_ASM70418v1	-	2-210-07_S4_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38143	65.6	-	MQGT01	5	4260	4095	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010378	GCA_001948285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/285/GCA_001948285.1_ASM194828v1	-	I0002837-8
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.24997	51.9	-	LVGW01	119	5474	5186	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941086	GCA_001595235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/235/GCA_001595235.1_CFSAN033854_01.0	-	CFSAN033854
Staphylococcus aureus DAR3153	1422283	PRJNA228371	228371	Terrabacteria group	Firmicutes	2.91602	33	-	JGTU01	17	3035	2840	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403833	GCA_000610505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/505/GCA_000610505.1_Stap_aure_DAR3153_V1	-	DAR3153
Staphylococcus aureus DAR3156	1422284	PRJNA228372	228372	Terrabacteria group	Firmicutes	2.84897	32.9	-	JGTV01	11	2993	2821	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403834	GCA_000610525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/525/GCA_000610525.1_Stap_aure_DAR3156_V1	-	DAR3156
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.90783	52.2	-	LVGX01	66	5037	4794	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941085	GCA_001595265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/265/GCA_001595265.1_CFSAN033853_01.0	-	CFSAN033853
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38073	65.6	-	MQHA01	14	4267	4094	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010385	GCA_001948305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/305/GCA_001948305.1_ASM194830v1	-	I0003277-6
Escherichia coli 2-210-07_S3_C1	1444122	PRJNA233779	233779	Proteobacteria	Gammaproteobacteria	4.70904	50.8	-	JNQH01	115	4916	4455	6/11/14	2/23/17	Contig	IGS	SAMN02687540	GCA_000704205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/205/GCA_000704205.1_ASM70420v1	-	2-210-07_S3_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.13212	39.5	-	FYMD01	68	2347	2134	6/25/17	7/5/17	Contig	SC	SAMEA1026547	GCA_900190645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/645/GCA_900190645.1_6472_8_13	-	UoS2289
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.66608	56.8	-	FXRA01	55	5775	5497	4/28/17	5/6/17	Scaffold	SC	SAMEA2609514	GCA_900181775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/775/GCA_900181775.1_14936_3_42	-	3189STDY5864799
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.9096	56.6	-	FXQR01	140	6066	5743	4/28/17	5/6/17	Scaffold	SC	SAMEA2609511	GCA_900181805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/805/GCA_900181805.1_14936_2_42	-	3189STDY5864895
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06063	39.5	-	FYMK01	68	2251	2028	6/25/17	7/5/17	Contig	SC	SAMEA1026636	GCA_900190655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/655/GCA_900190655.1_6593_2_13	-	UoS2354
Escherichia coli 2-177-06_S4_C1	1444204	PRJNA233861	233861	Proteobacteria	Gammaproteobacteria	5.14465	50.9	-	JNQG01	102	5425	4971	6/11/14	2/23/17	Contig	IGS	SAMN02687498	GCA_000704225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/225/GCA_000704225.1_ASM70422v1	-	2-177-06_S4_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3922	65.6	-	MQHE01	35	4293	4091	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010389	GCA_001948315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/315/GCA_001948315.1_ASM194831v1	-	I0003569-6
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.09481	52	-	LVGY01	139	5292	5020	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941084	GCA_001595275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/275/GCA_001595275.1_CFSAN033852_01.0	-	CFSAN033852
Staphylococcus aureus DAR3157	1422285	PRJNA228373	228373	Terrabacteria group	Firmicutes	2.88599	32.9	-	JGTW01	7	3021	2852	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403835	GCA_000610545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/545/GCA_000610545.1_Stap_aure_DAR3157_V1	-	DAR3157
Staphylococcus aureus DAR3162	1422286	PRJNA228374	228374	Terrabacteria group	Firmicutes	2.84593	32.9	-	JGTX01	14	2973	2804	3/27/14	3/4/17	Scaffold	Broad Institute	SAMN02403836	GCA_000610565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/565/GCA_000610565.1_Stap_aure_DAR3162_V1	-	DAR3162
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.92411	52.1	-	LVGZ01	108	5069	4811	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941083	GCA_001595305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/305/GCA_001595305.1_CFSAN033851_01.0	-	CFSAN033851
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39264	65.6	-	MQHF01	16	4280	4097	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010390	GCA_001948365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/365/GCA_001948365.1_ASM194836v1	-	I0002560-6
Escherichia coli 1-250-04_S1_C1	1444052	PRJNA233709	233709	Proteobacteria	Gammaproteobacteria	5.17706	50.6	-	JNQB01	108	5428	4976	6/11/14	2/25/17	Contig	IGS	SAMN02680097	GCA_000704245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/245/GCA_000704245.1_ASM70424v1	-	1-250-04_S1_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06525	39.5	-	FYMP01	67	2255	2021	6/25/17	7/5/17	Contig	SC	SAMEA1026349	GCA_900190665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/665/GCA_900190665.1_6593_2_9	-	UoS2340
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.56192	57.1	-	FXQW01	59	5706	5377	4/28/17	5/6/17	Scaffold	SC	SAMEA2609507	GCA_900181815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/815/GCA_900181815.1_14936_3_39	-	3189STDY5864796
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.66542	56.8	-	FXQZ01	52	5779	5506	4/28/17	5/6/17	Scaffold	SC	SAMEA2609510	GCA_900181825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/825/GCA_900181825.1_14936_3_40	-	3189STDY5864797
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.0886	39.5	-	FYNA01	65	2292	2070	6/25/17	7/5/17	Contig	SC	SAMEA1026763	GCA_900190675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/675/GCA_900190675.1_6593_2_16	-	UoS2371
Escherichia coli 1-250-04_S1_C2	1444080	PRJNA233737	233737	Proteobacteria	Gammaproteobacteria	5.1591	50.6	-	JNQC01	103	5419	4965	6/11/14	2/23/17	Contig	IGS	SAMN02680224	GCA_000704265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/265/GCA_000704265.1_ASM70426v1	-	1-250-04_S1_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.4061	65.6	-	MQHI01	44	4307	4121	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010393	GCA_001948375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/375/GCA_001948375.1_ASM194837v1	-	I0002904-6
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.04921	52.1	-	LVHA01	122	5252	4988	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941082	GCA_001595315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/315/GCA_001595315.1_CFSAN033850_01.0	-	CFSAN033850
Staphylococcus aureus DAR3163	1422287	PRJNA228375	228375	Terrabacteria group	Firmicutes	2.84817	32.9	-	JGTY01	7	2966	2791	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403837	GCA_000610585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/585/GCA_000610585.1_Stap_aure_DAR3163_V1	-	DAR3163
Staphylococcus aureus DAR3166	1422288	PRJNA228376	228376	Terrabacteria group	Firmicutes	2.79888	32.9	-	JGTZ01	9	2880	2712	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403838	GCA_000610605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/605/GCA_000610605.1_Stap_aure_DAR3166_V1	-	DAR3166
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.00932	52.1	-	LVHB01	177	5142	4873	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941081	GCA_001595345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/345/GCA_001595345.1_CFSAN033849_01.0	-	CFSAN033849
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37451	65.6	-	MQHK01	14	4253	4093	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010395	GCA_001948385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/385/GCA_001948385.1_ASM194838v1	-	I0003297-4
Escherichia coli 2-222-05_S1_C3	1444098	PRJNA233755	233755	Proteobacteria	Gammaproteobacteria	4.94372	50.6	-	JNQM01	104	5261	4812	6/11/14	2/23/17	Contig	IGS	SAMN02687472	GCA_000704285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/285/GCA_000704285.1_ASM70428v1	-	2-222-05_S1_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.02793	39.6	-	FYNG01	69	2195	1996	6/25/17	7/5/17	Contig	SC	SAMEA1026708	GCA_900190695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/695/GCA_900190695.1_6593_2_17	-	UoS2373
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.76296	56.7	-	FXRC01	86	5853	5537	4/28/17	5/6/17	Scaffold	SC	SAMEA2609508	GCA_900181835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/835/GCA_900181835.1_14936_2_40	-	3189STDY5864893
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.4725	57.2	-	FXRF01	60	5474	5193	4/28/17	5/6/17	Scaffold	SC	SAMEA2609512	GCA_900181855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/855/GCA_900181855.1_14936_3_41	-	3189STDY5864798
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.99099	39.7	-	FYNE01	71	2196	1962	6/25/17	7/5/17	Contig	SC	SAMEA1026735	GCA_900190715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/715/GCA_900190715.1_6593_2_19	-	UoS3003
Escherichia coli 2-316-03_S4_C1	1444207	PRJNA233864	233864	Proteobacteria	Gammaproteobacteria	5.22609	50.6	-	JNQS01	154	5470	5035	6/11/14	2/23/17	Contig	IGS	SAMN02687490	GCA_000704305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/305/GCA_000704305.1_ASM70430v1	-	2-316-03_S4_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38834	65.6	-	MQHR01	37	4284	4105	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010402	GCA_001948455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/455/GCA_001948455.1_ASM194845v1	-	I0002991-3
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.09221	52	-	LVHC01	112	5301	5029	3/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941080	GCA_001595355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/595/355/GCA_001595355.1_CFSAN033848_01.0	-	CFSAN033848
Staphylococcus aureus DAR3175	1422290	PRJNA228378	228378	Terrabacteria group	Firmicutes	2.95012	32.9	-	JGUA01	20	3125	2937	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403840	GCA_000610625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/625/GCA_000610625.1_Stap_aure_DAR3175_V1	-	DAR3175
Staphylococcus aureus DAR3176	1422291	PRJNA228379	228379	Terrabacteria group	Firmicutes	2.74251	32.9	-	JGUB01	6	2821	2660	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403841	GCA_000610645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/645/GCA_000610645.1_Stap_aure_DAR3176_V1	-	DAR3176
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA315008	315008	Proteobacteria	Gammaproteobacteria	4.70132	52.1	-	LUUA01	28	4820	4558	3/25/16	3/1/17	Contig	University of Regina	SAMN04555244	GCA_001597875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/875/GCA_001597875.1_ASM159787v1	-	EN1660
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39511	65.6	-	MQLW01	10	4264	4100	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010409	GCA_001948475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/475/GCA_001948475.1_ASM194847v1	-	I0004237-9
Escherichia coli 2-316-03_S4_C2	1444235	PRJNA233892	233892	Proteobacteria	Gammaproteobacteria	5.33299	50.6	-	JNQT01	210	5883	5168	6/11/14	2/23/17	Contig	IGS	SAMN02680191	GCA_000704325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/325/GCA_000704325.1_ASM70432v1	-	2-316-03_S4_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.98997	39.7	-	FYNC01	34	2187	1981	6/25/17	7/5/17	Contig	SC	SAMEA1026829	GCA_900190725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/725/GCA_900190725.1_6593_2_20	-	UoS3006
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.42658	57.3	-	FXRK01	52	5464	5157	4/28/17	5/6/17	Scaffold	SC	SAMEA2609519	GCA_900181875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/875/GCA_900181875.1_14936_3_44	-	3189STDY5864801
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.42631	57.3	-	FXRH01	48	5451	5165	4/28/17	5/6/17	Scaffold	SC	SAMEA2609517	GCA_900181895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/895/GCA_900181895.1_14936_3_43	-	3189STDY5864800
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03582	39.6	-	FYNJ01	44	2227	2002	6/25/17	7/5/17	Contig	SC	SAMEA1026831	GCA_900190735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/735/GCA_900190735.1_6593_2_21	-	UoS3009
Escherichia coli 2-316-03_S4_C3	1444265	PRJNA233922	233922	Proteobacteria	Gammaproteobacteria	5.42764	50.7	-	JNQU01	155	5775	5288	6/11/14	2/23/17	Contig	IGS	SAMN02680150	GCA_000704345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/345/GCA_000704345.1_ASM70434v1	-	2-316-03_S4_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40163	65.6	-	MQLZ01	5	4278	4120	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010412	GCA_001948525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/525/GCA_001948525.1_ASM194852v1	-	I0003083-8
Salmonella enterica subsp. enterica serovar Derby	28144	PRJNA296856	296856	Proteobacteria	Gammaproteobacteria	5.0966	51.8	-	LKIX01	97	5227	4894	4/7/16	3/1/17	Contig	Texas Tech University	SAMN04110125	GCA_001613945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/945/GCA_001613945.1_ASM161394v1	-	2012CEB117SAL
Staphylococcus aureus DAR3177	1422292	PRJNA228380	228380	Terrabacteria group	Firmicutes	2.77293	32.8	-	JGUC01	5	2866	2695	3/27/14	3/4/17	Scaffold	Broad Institute	SAMN02403842	GCA_000610665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/665/GCA_000610665.1_Stap_aure_DAR3177_V1	-	DAR3177
Staphylococcus aureus DAR3178	1422293	PRJNA228381	228381	Terrabacteria group	Firmicutes	2.73628	32.8	-	JGUD01	5	2840	2674	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403843	GCA_000610685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/685/GCA_000610685.1_Stap_aure_DAR3178_V1	-	DAR3178
Salmonella enterica subsp. enterica serovar Derby	28144	PRJNA296856	296856	Proteobacteria	Gammaproteobacteria	4.83871	52.1	-	LKIY01	62	4948	4662	4/7/16	3/1/17	Contig	Texas Tech University	SAMN04110126	GCA_001613955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/955/GCA_001613955.1_ASM161395v1	-	2012CEB922SAL
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40557	65.6	-	MQMC01	9	4280	4110	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010415	GCA_001948535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/535/GCA_001948535.1_ASM194853v1	-	M0016693-5
Escherichia coli 2-427-07_S1_C2	1444072	PRJNA233729	233729	Proteobacteria	Gammaproteobacteria	4.79616	50.6	-	JNQW01	135	5043	4611	6/11/14	2/23/17	Contig	IGS	SAMN02680164	GCA_000704365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/365/GCA_000704365.1_ASM70436v1	-	2-427-07_S1_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.04588	39.6	-	FYNF01	25	2262	2033	6/25/17	7/5/17	Contig	SC	SAMEA1026501	GCA_900190755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/755/GCA_900190755.1_6593_2_23	-	UoS3017
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.4423	57.1	-	FXRT01	33	5471	5207	4/28/17	5/6/17	Scaffold	SC	SAMEA2609535	GCA_900181985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/181/985/GCA_900181985.1_14936_3_52	-	3189STDY5864809
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.80074	56.6	-	FXRU01	173	5819	5423	4/28/17	5/6/17	Scaffold	SC	SAMEA2609544	GCA_900182025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/182/025/GCA_900182025.1_14936_3_57	-	3189STDY5864814
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05813	39.5	-	FYNM01	57	2220	2020	6/25/17	7/5/17	Contig	SC	SAMEA1026560	GCA_900190795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/795/GCA_900190795.1_6512_1_3	-	UoS3024
Escherichia coli 2-427-07_S3_C1	1444125	PRJNA233782	233782	Proteobacteria	Gammaproteobacteria	5.28722	50.7	-	JNQX01	119	5464	5087	6/11/14	2/23/17	Contig	IGS	SAMN02680161	GCA_000704385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/385/GCA_000704385.1_ASM70438v1	-	2-427-07_S3_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39314	65.6	-	MQHW01	19	4281	4101	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010421	GCA_001948565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/565/GCA_001948565.1_ASM194856v1	-	M0017196-8
Salmonella enterica subsp. enterica serovar Paratyphi B	57045	PRJNA296856	296856	Proteobacteria	Gammaproteobacteria	4.78774	52.1	-	LKIZ01	64	4894	4617	4/7/16	3/1/17	Contig	Texas Tech University	SAMN04110127	GCA_001613965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/613/965/GCA_001613965.1_ASM161396v1	-	2008CEB2743SAL
Staphylococcus aureus DAR3179	1422294	PRJNA228383	228383	Terrabacteria group	Firmicutes	2.86145	32.9	-	JGUE01	17	3002	2828	3/27/14	3/4/17	Scaffold	Broad Institute	SAMN02403844	GCA_000610705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/705/GCA_000610705.1_Stap_aure_DAR3179_V1	-	DAR3179
Staphylococcus aureus DAR3183	1422295	PRJNA228385	228385	Terrabacteria group	Firmicutes	2.77367	32.8	-	JGUF01	7	2876	2697	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403845	GCA_000610725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/725/GCA_000610725.1_Stap_aure_DAR3183_V1	-	DAR3183
Salmonella enterica subsp. enterica serovar Paratyphi B	57045	PRJNA296856	296856	Proteobacteria	Gammaproteobacteria	4.82242	52.1	-	LKJC01	77	4933	4643	4/7/16	3/1/17	Contig	Texas Tech University	SAMN04110130	GCA_001614015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/015/GCA_001614015.1_ASM161401v1	-	2012CEB707SAL
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38698	65.6	-	MQHX01	19	4266	4096	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010422	GCA_001948605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/605/GCA_001948605.1_ASM194860v1	-	I0004300-5
Escherichia coli 2-427-07_S3_C3	1444183	PRJNA233840	233840	Proteobacteria	Gammaproteobacteria	4.87591	50.7	-	JNQY01	88	5081	4727	6/11/14	2/23/17	Contig	IGS	SAMN02680166	GCA_000704405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/405/GCA_000704405.1_ASM70440v1	-	2-427-07_S3_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.11908	39.6	-	FYNN01	57	2345	2104	6/25/17	7/5/17	Contig	SC	SAMEA1026541	GCA_900190805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/805/GCA_900190805.1_6512_1_4	-	UoS3026
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.65767	56.8	-	FXRX01	72	5698	5401	4/28/17	5/6/17	Scaffold	SC	SAMEA2609542	GCA_900182045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/182/045/GCA_900182045.1_14936_3_56	-	3189STDY5864813
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.90239	56.5	-	FXSA01	122	6002	5640	4/28/17	5/6/17	Scaffold	SC	SAMEA2609546	GCA_900182055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/182/055/GCA_900182055.1_14936_3_58	-	3189STDY5864815
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.15441	39.7	-	FYNP01	79	2347	2021	6/25/17	7/5/17	Contig	SC	SAMEA1026556	GCA_900190815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/815/GCA_900190815.1_6512_1_5	-	UoS3029
Escherichia coli 2-427-07_S4_C1	1444208	PRJNA233865	233865	Proteobacteria	Gammaproteobacteria	5.24807	50.7	-	JNQZ01	194	5675	5116	6/11/14	2/23/17	Contig	IGS	SAMN02687491	GCA_000704425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/425/GCA_000704425.1_ASM70442v1	-	2-427-07_S4_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38873	65.6	-	MQIA01	21	4275	4098	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010425	GCA_001948615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/615/GCA_001948615.1_ASM194861v1	-	I0003622-3
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA296856	296856	Proteobacteria	Gammaproteobacteria	5.1931	51.9	-	LKJE01	108	5423	5117	4/7/16	2/21/17	Contig	Texas Tech University	SAMN04110139	GCA_001614025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/025/GCA_001614025.1_ASM161402v1	-	2012CEB2427SAL
Staphylococcus aureus DAR3198	1422296	PRJNA228386	228386	Terrabacteria group	Firmicutes	2.73555	32.8	-	JGUG01	5	2824	2670	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403846	GCA_000610745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/745/GCA_000610745.1_Stap_aure_DAR3198_V1	-	DAR3198
Staphylococcus aureus DAR3236	1422297	PRJNA228387	228387	Terrabacteria group	Firmicutes	2.88095	32.8	-	JGUH01	15	3015	2839	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403847	GCA_000610765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/765/GCA_000610765.1_Stap_aure_DAR3236_V1	-	DAR3236
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA296856	296856	Proteobacteria	Gammaproteobacteria	4.79461	52.1	-	LKJG01	71	4885	4633	4/7/16	3/1/17	Contig	Texas Tech University	SAMN04110132	GCA_001614045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/045/GCA_001614045.1_ASM161404v1	-	2012LNR770
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38799	65.6	-	MQID01	39	4284	4088	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010428	GCA_001948625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/625/GCA_001948625.1_ASM194862v1	-	I0003998-7
Escherichia coli 2-427-07_S4_C2	1444236	PRJNA233893	233893	Proteobacteria	Gammaproteobacteria	5.56062	50.7	-	JNRA01	141	5963	5496	6/11/14	2/23/17	Contig	IGS	SAMN02680145	GCA_000704445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/445/GCA_000704445.1_ASM70444v1	-	2-427-07_S4_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.04534	39.6	-	FYNR01	54	2253	2036	6/25/17	7/5/17	Contig	SC	SAMEA1026519	GCA_900190835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/835/GCA_900190835.1_6512_1_7	-	UoS3032
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.70761	56.9	-	FXRZ01	84	5845	5508	4/28/17	5/6/17	Scaffold	SC	SAMEA2609548	GCA_900182065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/182/065/GCA_900182065.1_14936_3_59	-	3189STDY5864816
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.76961	56.6	-	FXSD01	115	6033	5466	4/28/17	5/6/17	Scaffold	SC	SAMEA2609549	GCA_900182075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/182/075/GCA_900182075.1_14936_3_60	-	3189STDY5864817
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05827	39.6	-	FYNO01	61	2237	2038	6/25/17	7/5/17	Contig	SC	SAMEA1026624	GCA_900190845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/845/GCA_900190845.1_6512_1_10	-	UoS3042
Escherichia coli 2-460-02_S3_C1	1444126	PRJNA233783	233783	Proteobacteria	Gammaproteobacteria	5.47569	50.8	-	JNRB01	250	6040	5279	6/11/14	2/23/17	Contig	IGS	SAMN02680247	GCA_000704465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/465/GCA_000704465.1_ASM70446v1	-	2-460-02_S3_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39308	65.6	-	MQIG01	5	4265	4099	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010431	GCA_001948645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/645/GCA_001948645.1_ASM194864v1	-	I0004277-5
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA296856	296856	Proteobacteria	Gammaproteobacteria	4.79107	51.9	-	LKJF01	53	4870	4603	4/7/16	3/1/17	Contig	Texas Tech University	SAMN04110131	GCA_001614065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/065/GCA_001614065.1_ASM161406v1	-	06CEB13678SAL
Staphylococcus aureus DAR5890	1422298	PRJNA228388	228388	Terrabacteria group	Firmicutes	2.94808	32.9	-	JGUI01	16	3106	2917	3/27/14	3/4/17	Scaffold	Broad Institute	SAMN02403848	GCA_000610785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/785/GCA_000610785.1_Stap_aure_DAR5890_V1	-	DAR5890
Staphylococcus aureus DAR5889	1422299	PRJNA228389	228389	Terrabacteria group	Firmicutes	2.96379	32.9	-	JGUJ01	7	3130	2949	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403849	GCA_000610805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/805/GCA_000610805.1_Stap_aure_DAR5889_V1	-	DAR5889
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA296856	296856	Proteobacteria	Gammaproteobacteria	4.79678	52.1	-	LKJH01	44	4885	4639	4/7/16	3/1/17	Contig	Texas Tech University	SAMN04110133	GCA_001614095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/095/GCA_001614095.1_ASM161409v1	-	2012LNR994
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3673	65.6	-	MQIJ01	37	4270	4084	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010434	GCA_001948685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/685/GCA_001948685.1_ASM194868v1	-	I0004266-8
Escherichia coli 2-460-02_S3_C2	1444155	PRJNA233812	233812	Proteobacteria	Gammaproteobacteria	5.46538	50.8	-	JNRC01	293	6052	5305	6/11/14	2/23/17	Contig	IGS	SAMN02680231	GCA_000704485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/485/GCA_000704485.1_ASM70448v1	-	2-460-02_S3_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.11664	39.7	-	FYOC01	73	2355	2091	6/25/17	7/5/17	Contig	SC	SAMEA1026661	GCA_900190885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/885/GCA_900190885.1_6512_1_12	-	UoS3050
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.42865	57.3	-	FXSF01	50	5480	5203	4/28/17	5/6/17	Scaffold	SC	SAMEA2609553	GCA_900182095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/182/095/GCA_900182095.1_14936_3_62	-	3189STDY5864819
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.68964	56.7	-	FXSG01	114	5864	5393	4/28/17	5/6/17	Scaffold	SC	SAMEA2609555	GCA_900182105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/182/105/GCA_900182105.1_14936_3_63	-	3189STDY5864820
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.12689	39.5	-	FYNZ01	48	2343	2114	6/25/17	7/5/17	Contig	SC	SAMEA1026767	GCA_900190955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/955/GCA_900190955.1_6512_1_20	-	UoS3068
Escherichia coli 2-460-02_S3_C3	1444184	PRJNA233841	233841	Proteobacteria	Gammaproteobacteria	5.36691	50.9	-	JNRD01	298	6022	5266	6/11/14	2/23/17	Contig	IGS	SAMN02680134	GCA_000704505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/505/GCA_000704505.1_ASM70450v1	-	2-460-02_S3_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38905	65.6	-	MQIM01	16	4275	4095	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010437	GCA_001948695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/695/GCA_001948695.1_ASM194869v1	-	I0004265-0
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA296856	296856	Proteobacteria	Gammaproteobacteria	4.69519	52.1	-	LKJL01	55	4764	4499	4/7/16	3/1/17	Contig	Texas Tech University	SAMN04110138	GCA_001614105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/105/GCA_001614105.1_ASM161410v1	-	2012CEB3592SAL
Staphylococcus aureus DAR5888	1422300	PRJNA228390	228390	Terrabacteria group	Firmicutes	3.00395	33	-	JGUK01	13	3160	2951	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403850	GCA_000610825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/825/GCA_000610825.1_Stap_aure_DAR5888_V1	-	DAR5888
Staphylococcus aureus DAR5887	1422301	PRJNA228391	228391	Terrabacteria group	Firmicutes	3.00355	33.1	-	JGUL01	26	3151	2936	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403851	GCA_000610845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/845/GCA_000610845.1_Stap_aure_DAR5887_V1	-	DAR5887
Salmonella enterica subsp. enterica serovar Paratyphi B	57045	PRJNA296856	296856	Proteobacteria	Gammaproteobacteria	4.90467	51.9	-	LKJA01	67	4984	4698	4/7/16	3/1/17	Contig	Texas Tech University	SAMN04110128	GCA_001614125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/125/GCA_001614125.1_ASM161412v1	-	2010CEB2598SAL
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38891	65.6	-	MQIP01	10	4259	4104	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010440	GCA_001948705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/705/GCA_001948705.1_ASM194870v1	-	I0003338-6
Escherichia coli 2-460-02_S4_C2	1444237	PRJNA233894	233894	Proteobacteria	Gammaproteobacteria	5.3465	50.5	-	JNRE01	175	5797	5248	6/11/14	2/23/17	Contig	IGS	SAMN02687521	GCA_000704525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/525/GCA_000704525.1_ASM70452v1	-	2-460-02_S4_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.98148	39.7	-	FYOI01	52	2175	1958	6/25/17	7/5/17	Contig	SC	SAMEA1026723	GCA_900190965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/965/GCA_900190965.1_6512_1_22	-	UoS3077
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.88157	56.5	-	FXSE01	108	5976	5640	4/28/17	5/6/17	Scaffold	SC	SAMEA2609556	GCA_900182115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/182/115/GCA_900182115.1_14936_3_64	-	3189STDY5864821
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.58081	57	-	FXSL01	58	5598	5320	4/28/17	5/6/17	Scaffold	SC	SAMEA2609559	GCA_900182155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/182/155/GCA_900182155.1_14936_3_65	-	3189STDY5864822
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10063	39.6	-	FYNY01	72	2293	2074	6/25/17	7/5/17	Contig	SC	SAMEA1026334	GCA_900191015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/015/GCA_900191015.1_6512_2_4	-	UoS3099
Escherichia coli 2-460-02_S4_C3	1444267	PRJNA233924	233924	Proteobacteria	Gammaproteobacteria	5.34593	50.6	-	JNRF01	172	5822	5253	6/11/14	2/23/17	Contig	IGS	SAMN02687536	GCA_000704545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/545/GCA_000704545.1_ASM70454v1	-	2-460-02_S4_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35315	65.6	-	MQIS01	19	4262	4088	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010443	GCA_001948725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/725/GCA_001948725.1_ASM194872v1	-	I0003826-0
Salmonella enterica subsp. enterica serovar Paratyphi B	57045	PRJNA296856	296856	Proteobacteria	Gammaproteobacteria	4.81786	52.1	-	LKJB01	63	4926	4652	4/7/16	3/1/17	Contig	Texas Tech University	SAMN04110129	GCA_001614145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/145/GCA_001614145.1_ASM161414v1	-	2010CEB2956SAL
Staphylococcus aureus DAR5886	1422302	PRJNA228392	228392	Terrabacteria group	Firmicutes	2.99213	33	-	JGUM01	17	3152	2962	3/27/14	3/4/17	Scaffold	Broad Institute	SAMN02403852	GCA_000610865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/865/GCA_000610865.1_Stap_aure_DAR5886_V1	-	DAR5886
Staphylococcus aureus DAR5885	1422303	PRJNA228393	228393	Terrabacteria group	Firmicutes	3.00502	33	-	JGUN01	16	3169	2973	3/27/14	3/4/17	Scaffold	Broad Institute	SAMN02403853	GCA_000610885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/885/GCA_000610885.1_Stap_aure_DAR5885_V1	-	DAR5885
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA296856	296856	Proteobacteria	Gammaproteobacteria	4.99505	52.1	-	LKJI01	97	5181	4853	4/7/16	3/1/17	Contig	Texas Tech University	SAMN04110134	GCA_001614175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/175/GCA_001614175.1_ASM161417v1	-	2012CEB432SAL
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41645	65.6	-	MQIV01	43	4317	4103	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010446	GCA_001948765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/765/GCA_001948765.1_ASM194876v1	-	I0004527-3
Escherichia coli 2-474-04_S1_C1	1444045	PRJNA233702	233702	Proteobacteria	Gammaproteobacteria	5.12497	50.9	-	JNRG01	201	5422	4875	6/11/14	2/23/17	Contig	IGS	SAMN02680237	GCA_000704565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/565/GCA_000704565.1_ASM70456v1	-	2-474-04_S1_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.13925	39.3	-	FYOD01	56	2361	2117	6/25/17	7/5/17	Contig	SC	SAMEA1026839	GCA_900191025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/025/GCA_900191025.1_6512_2_10	-	UoS3138
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.42767	57.3	-	FXSO01	45	5475	5187	4/28/17	5/6/17	Scaffold	SC	SAMEA2609566	GCA_900182165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/182/165/GCA_900182165.1_14936_3_68	-	3189STDY5864825
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.50438	57.3	-	FXSQ01	43	5511	5257	4/28/17	5/6/17	Scaffold	SC	SAMEA2609571	GCA_900182215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/182/215/GCA_900182215.1_14936_3_71	-	3189STDY5864828
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.13588	39.6	-	FYNX01	66	2358	2120	6/25/17	7/5/17	Contig	SC	SAMEA1026805	GCA_900191035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/035/GCA_900191035.1_6512_2_8	-	UoS3122
Escherichia coli 2-474-04_S3_C1	1444127	PRJNA233784	233784	Proteobacteria	Gammaproteobacteria	5.44677	50.7	-	JNRH01	333	6180	5385	6/11/14	2/23/17	Contig	IGS	SAMN02680249	GCA_000704585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/585/GCA_000704585.1_ASM70458v1	-	2-474-04_S3_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35994	65.6	-	MQIZ01	26	4254	4078	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010450	GCA_001948775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/775/GCA_001948775.1_ASM194877v1	-	I0003112-5
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	5.03631	51.8	-	LWJA02	43	5102	4851	4/14/16	4/27/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902489	GCA_001620755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/755/GCA_001620755.2_ASM162075v2	-	NY_FSL S10-1757
Staphylococcus aureus DAR5884	1422304	PRJNA228394	228394	Terrabacteria group	Firmicutes	3.03911	33.3	-	JGUO01	22	3137	2933	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403854	GCA_000610905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/905/GCA_000610905.1_Stap_aure_DAR5884_V1	-	DAR5884
Staphylococcus aureus DAR5881	1422305	PRJNA228395	228395	Terrabacteria group	Firmicutes	3.16644	33.7	-	JGUP01	26	3187	2985	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403855	GCA_000610925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/925/GCA_000610925.1_Stap_aure_DAR5881_V1	-	DAR5881
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183848	183848	Proteobacteria	Gammaproteobacteria	4.77121	52.1	-	LWJB01	307	5012	4462	4/14/16	3/1/17	Contig	Florida Department of Health	SAMN02261215	GCA_001620785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/785/GCA_001620785.1_ASM162078v1	-	CFSAN001384
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38435	65.6	-	MQIW01	55	4282	4110	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010447	GCA_001948785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/785/GCA_001948785.1_ASM194878v1	-	I0003206-5
Escherichia coli 2-474-04_S3_C2	1444156	PRJNA233813	233813	Proteobacteria	Gammaproteobacteria	5.36263	50.7	-	JNRI01	248	5997	5286	6/11/14	2/23/17	Contig	IGS	SAMN02687508	GCA_000704605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/605/GCA_000704605.1_ASM70460v1	-	2-474-04_S3_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06873	39.6	-	FYOK01	44	2282	2049	6/25/17	7/5/17	Contig	SC	SAMEA1026817	GCA_900191055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/055/GCA_900191055.1_6512_2_9	-	UoS3123
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.75396	56.7	-	FXSR01	86	5902	5542	4/28/17	5/6/17	Scaffold	SC	SAMEA2609570	GCA_900182225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/182/225/GCA_900182225.1_14936_3_70	-	3189STDY5864827
Klebsiella pneumoniae subsp. pneumoniae	72407	PRJEB6574	277158	Proteobacteria	Gammaproteobacteria	5.71507	57	-	FXSV01	91	5764	5440	5/3/17	5/24/17	Scaffold	SC	SAMEA2609475	GCA_900182505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/182/505/GCA_900182505.1_14936_2_23	-	3189STDY5864876
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.134	39.7	-	FYOF01	95	2314	2010	6/25/17	7/5/17	Contig	SC	SAMEA1026717	GCA_900191065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/065/GCA_900191065.1_6512_2_11	-	UoS3140
Escherichia coli 2-427-07_S1_C3	1444099	PRJNA233756	233756	Proteobacteria	Gammaproteobacteria	5.19632	50.7	-	JNRJ01	145	5551	5071	6/11/14	2/23/17	Contig	IGS	SAMN02680177	GCA_000704625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/625/GCA_000704625.1_ASM70462v1	-	2-427-07_S1_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37549	65.6	-	MQJD01	2	4256	4097	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010454	GCA_001948805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/805/GCA_001948805.1_ASM194880v1	-	I0004154-6
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.77484	52.2	-	LWJC01	218	4932	4458	4/14/16	3/1/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN02261202	GCA_001620795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/795/GCA_001620795.1_ASM162079v1	-	CFSAN001371
Staphylococcus aureus DAR5872	1422306	PRJNA228396	228396	Terrabacteria group	Firmicutes	2.95575	33.1	-	JGUQ01	6	3061	2879	3/27/14	3/4/17	Scaffold	Broad Institute	SAMN02403856	GCA_000610945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/945/GCA_000610945.1_Stap_aure_DAR5872_V1	-	DAR5872
Staphylococcus aureus DAR5871	1422307	PRJNA228397	228397	Terrabacteria group	Firmicutes	2.91916	32.9	-	JGUR01	13	3056	2873	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403857	GCA_000610965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/965/GCA_000610965.1_Stap_aure_DAR5871_V1	-	DAR5871
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183851	183851	Proteobacteria	Gammaproteobacteria	4.89155	52.1	-	LWJD01	207	5091	4644	4/14/16	3/1/17	Contig	Washington State Department of Health Public Health Laboratory	SAMN02261196	GCA_001620815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/815/GCA_001620815.1_ASM162081v1	-	CFSAN001365
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37868	65.6	-	MQJG01	24	4270	4098	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010457	GCA_001948845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/845/GCA_001948845.1_ASM194884v1	-	I0003329-5
Escherichia coli 2-474-04_S1_C2	1444074	PRJNA233731	233731	Proteobacteria	Gammaproteobacteria	4.92597	50.8	-	JNRK01	143	5118	4674	6/11/14	2/23/17	Contig	IGS	SAMN02680174	GCA_000704645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/645/GCA_000704645.1_ASM70464v1	-	2-474-04_S1_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.12865	39.7	-	FYOM01	73	2297	1994	6/25/17	7/5/17	Contig	SC	SAMEA1026740	GCA_900191085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/085/GCA_900191085.1_6512_2_12	-	UoS3143
Candidatus Sulcia muelleri	336810	PRJNA321268	321268	FCB group	Bacteroidetes/Chlorobi group	0.192244	23.7	chromosome:NZ_CP016223.1/CP016223.1	-	1	228	176	6/28/16	4/5/17	Complete Genome	Fujian agriculture and forestry university	SAMN04978816	GCA_001677255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/255/GCA_001677255.1_ASM167725v1	-	NC
Klebsiella pneumoniae	573	PRJNA271515	271515	Proteobacteria	Gammaproteobacteria	5.08107	57.6	chromosome:CP011421.1	-	1	4747	4587	5/13/15	7/30/15	Chromosome	food sience	SAMN03274783	GCA_001006265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/265/GCA_001006265.1_ASM100626v1	-	yzusk-4
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.0937	39.5	-	FYOP01	72	2300	2076	6/25/17	7/5/17	Contig	SC	SAMEA1026714	GCA_900191095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/095/GCA_900191095.1_6512_1_21	-	UoS3074
Escherichia coli 2-474-04_S3_C3	1444185	PRJNA233842	233842	Proteobacteria	Gammaproteobacteria	5.44806	50.7	-	JNRL01	308	6089	5349	6/11/14	2/23/17	Contig	IGS	SAMN02687527	GCA_000704665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/665/GCA_000704665.1_ASM70466v1	-	2-474-04_S3_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39579	65.6	-	MQJJ01	7	4270	4104	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010460	GCA_001948855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/855/GCA_001948855.1_ASM194885v1	-	I0005328-5
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183847	183847	Proteobacteria	Gammaproteobacteria	4.79482	52.2	-	LWJE01	62	4856	4571	4/14/16	3/1/17	Contig	 Arizona State Public Health Laboratory	SAMN02261213	GCA_001620835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/835/GCA_001620835.1_ASM162083v1	-	CFSAN001382
Staphylococcus aureus DAR5870	1422308	PRJNA228398	228398	Terrabacteria group	Firmicutes	2.88585	32.9	-	JGUS01	9	3021	2830	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403858	GCA_000610985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/610/985/GCA_000610985.1_Stap_aure_DAR5870_V1	-	DAR5870
Staphylococcus aureus DAR5869	1422309	PRJNA228399	228399	Terrabacteria group	Firmicutes	2.96355	32.9	-	JGUT01	32	3119	2933	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403859	GCA_000611005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/005/GCA_000611005.1_Stap_aure_DAR5869_V1	-	DAR5869
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183848	183848	Proteobacteria	Gammaproteobacteria	4.79664	52.2	-	LWJF01	56	4857	4564	4/14/16	3/1/17	Contig	Florida Department of Health	SAMN02261191	GCA_001620865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/865/GCA_001620865.1_ASM162086v1	-	CFSAN001351
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39081	65.6	-	MQJK01	10	4264	4096	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010461	GCA_001948865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/865/GCA_001948865.1_ASM194886v1	-	I0005422-6
Escherichia coli 3-020-07_S1_C1	1444054	PRJNA233711	233711	Proteobacteria	Gammaproteobacteria	5.09178	50.8	-	JNRO01	177	5388	4864	6/11/14	2/23/17	Contig	IGS	SAMN02680139	GCA_000704685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/685/GCA_000704685.1_ASM70468v1	-	3-020-07_S1_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05369	39.6	-	FYOL01	59	2251	2025	6/25/17	7/5/17	Contig	SC	SAMEA1026406	GCA_900191105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/105/GCA_900191105.1_6512_2_14	-	UoS3154
Klebsiella pneumoniae RYC492	1250520	PRJNA179092	179092	Proteobacteria	Gammaproteobacteria	5.38378	57.3971	chromosome:APGM01000001.1	APGM01	159	4943	4832	3/11/13	3/11/13	Chromosome	"Laboratorio de Biología Estructural y Molecular, Facultad de Ciencias, Universidad de Chile"	SAMN02471363	GCA_000346145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/346/145/GCA_000346145.1_KPRYC492V1.1	23661477	RYC492
Klebsiella pneumoniae	573	PRJEB4160	215059	Proteobacteria	Gammaproteobacteria	4.1872	57.3	-	CCCQ02	14	3846	3840	5/1/14	1/30/15	Scaffold	Genoscope CEA	SAMEA3139054	GCA_000723925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/925/GCA_000723925.1_AFW_PRJEB4160_v1	-	SB3193
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03339	39.6	-	FYOZ01	41	2231	2018	6/25/17	7/5/17	Contig	SC	SAMEA1026424	GCA_900191145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/145/GCA_900191145.1_6512_2_18	-	UoS3161
Escherichia coli 2-474-04_S4_C2	1444238	PRJNA233895	233895	Proteobacteria	Gammaproteobacteria	5.0448	50.8	-	JNRM01	87	5303	4913	6/11/14	2/23/17	Contig	IGS	SAMN02687511	GCA_000704705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/705/GCA_000704705.1_ASM70470v1	-	2-474-04_S4_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41004	65.6	-	MQJN01	14	4289	4130	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010464	GCA_001948885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/885/GCA_001948885.1_ASM194888v1	-	I0004385-6
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.82512	52.1	-	LWRK01	58	4915	4647	4/23/16	3/3/17	Contig	Center for Food Safety and Applied Nutrition	SAMN01907435	GCA_001630135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/630/135/GCA_001630135.1_ASM163013v1	-	MOD1_SALC_70
Staphylococcus aureus DAR5868	1422310	PRJNA228400	228400	Terrabacteria group	Firmicutes	2.98891	32.9	-	JGUU01	10	3151	2960	3/27/14	3/3/17	Scaffold	Broad Institute	SAMN02403860	GCA_000611025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/611/025/GCA_000611025.1_Stap_aure_DAR5868_V1	-	DAR5868
Staphylococcus aureus 07-03450	1413350	PRJNA226303	226303	Terrabacteria group	Firmicutes	2.69769	32.7	-	JJEZ01	42	2785	2626	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391177	GCA_000636155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/155/GCA_000636155.1_Stap_aure_07-03450_V1	-	07-03450
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183848	183848	Proteobacteria	Gammaproteobacteria	4.7801	52.2	-	LWRE01	127	4879	4496	4/23/16	3/1/17	Contig	Florida Department of Health	SAMN02261203	GCA_001630315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/630/315/GCA_001630315.1_ASM163031v1	-	CFSAN001372
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39611	65.6	-	MQJU01	9	4265	4100	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010471	GCA_001948935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/935/GCA_001948935.1_ASM194893v1	-	C0010613-9
Escherichia coli 2-474-04_S4_C3	1444268	PRJNA233925	233925	Proteobacteria	Gammaproteobacteria	5.02804	50.8	-	JNRN01	93	5295	4900	6/11/14	2/23/17	Contig	IGS	SAMN02687523	GCA_000704725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/725/GCA_000704725.1_ASM70472v1	-	2-474-04_S4_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.9562	39.7	-	FYOU01	50	2152	1927	6/25/17	7/5/17	Contig	SC	SAMEA1026339	GCA_900191155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/155/GCA_900191155.1_6512_2_19	-	UoS3162
Klebsiella pneumoniae	573	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	6.47836	56.2	-	LFBC01	12	6258	6153	6/19/15	12/12/16	Scaffold	Broad Institute	SAMN03280416	GCA_001034065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/065/GCA_001034065.1_Kleb_pneu_BIDMC90_V1	-	BIDMC90
Klebsiella pneumoniae	573	PRJNA320822	320822	Proteobacteria	Gammaproteobacteria	5.04538	56.8	-	LZSB01	2128	4465	2010	6/21/16	10/24/16	Scaffold	Christian Medical College	SAMN04957958	GCA_001674985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/985/GCA_001674985.1_ASM167498v1	-	B2834
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10273	39.5	-	FYOR01	63	2309	2081	6/25/17	7/5/17	Contig	SC	SAMEA1026366	GCA_900191165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/165/GCA_900191165.1_6512_2_21	-	UoS3165
Escherichia coli 3-020-07_S1_C2	1444082	PRJNA233739	233739	Proteobacteria	Gammaproteobacteria	5.03229	50.8	-	JNRP01	121	5275	4823	6/11/14	2/23/17	Contig	IGS	SAMN02680185	GCA_000704745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/745/GCA_000704745.1_ASM70474v1	-	3-020-07_S1_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38772	65.6	-	MQKA01	18	4270	4092	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010477	GCA_001948965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/965/GCA_001948965.1_ASM194896v1	-	I0005510-8
Salmonella enterica	28901	PRJNA310709	310709	Proteobacteria	Gammaproteobacteria	4.95223	51.9	-	LRYA01	125	5099	4816	5/11/16	3/1/17	Contig	University of Malaya	SAMN04454429	GCA_001642435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/435/GCA_001642435.1_ASM164243v1	-	7
Staphylococcus aureus 08-01084	1413352	PRJNA226305	226305	Terrabacteria group	Firmicutes	2.78325	32.8	-	JJEV01	33	2887	2706	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391179	GCA_000636175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/175/GCA_000636175.1_Stap_aure_08-01084_V1	-	08-01084
Staphylococcus aureus 08-01085	1413353	PRJNA226306	226306	Terrabacteria group	Firmicutes	2.78573	32.9	-	JJEU01	29	2881	2697	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391180	GCA_000636195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/195/GCA_000636195.1_Stap_aure_08-01085_V1	-	08-01085
Salmonella enterica	28901	PRJNA318665	318665	Proteobacteria	Gammaproteobacteria	4.84882	52.1	-	LWMB01	108	4974	4678	5/11/16	3/1/17	Contig	University of Malaya	SAMN04859614	GCA_001642445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/445/GCA_001642445.1_ASM164244v1	-	12
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39134	65.6	-	MQKH01	6	4264	4099	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010484	GCA_001949025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/025/GCA_001949025.1_ASM194902v1	-	M0025667-8
Escherichia coli 3-020-07_S1_C3	1444108	PRJNA233765	233765	Proteobacteria	Gammaproteobacteria	5.07029	50.8	-	JNRQ01	155	5405	4874	6/11/14	2/23/17	Contig	IGS	SAMN02687535	GCA_000704765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/765/GCA_000704765.1_ASM70476v1	-	3-020-07_S1_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06672	39.6	-	FYPB01	56	2256	2029	6/25/17	7/5/17	Contig	SC	SAMEA1026346	GCA_900191185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/185/GCA_900191185.1_6512_2_22	-	UoS3166
Klebsiella pneumoniae	573	PRJNA325346	325346	Proteobacteria	Gammaproteobacteria	6.07015	57	-	LZPA01	1487	5674	5047	9/8/16	9/8/16	Scaffold	Christian Medical College	SAMN05226866	GCA_001721545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/545/GCA_001721545.1_ASM172154v1	-	B9888
Klebsiella pneumoniae	573	PRJNA324533	324533	Proteobacteria	Gammaproteobacteria	5.91707	56.6	-	LZYN01	320	5857	5001	9/8/16	9/8/16	Scaffold	Christian Medical College	SAMN05207686	GCA_001721555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/555/GCA_001721555.1_ASM172155v1	-	BA41763
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06202	39.5	-	FYPC01	76	2265	2018	6/25/17	7/5/17	Contig	SC	SAMEA1026432	GCA_900191225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/225/GCA_900191225.1_6512_3_3	-	UoS3182
Escherichia coli 3-020-07_S3_C1	1444137	PRJNA233794	233794	Proteobacteria	Gammaproteobacteria	5.51469	50.5	-	JNRR01	192	6023	5434	6/11/14	2/23/17	Contig	IGS	SAMN02680107	GCA_000704785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/785/GCA_000704785.1_ASM70478v1	-	3-020-07_S3_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38039	65.6	-	MQKK01	15	4265	4089	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010487	GCA_001949045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/045/GCA_001949045.1_ASM194904v1	-	C0000689-1
Salmonella enterica	28901	PRJNA310712	310712	Proteobacteria	Gammaproteobacteria	4.88851	52.1	-	LRYB01	127	5053	4792	5/11/16	3/1/17	Contig	University of Malaya	SAMN04455026	GCA_001642485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/485/GCA_001642485.1_ASM164248v1	-	8
Staphylococcus aureus 08-01728	1413347	PRJNA226300	226300	Terrabacteria group	Firmicutes	2.77486	32.9	-	JJES01	25	2864	2689	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391174	GCA_000636215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/215/GCA_000636215.1_Stap_aure_08-01728_V1	-	08-01728
Staphylococcus aureus 08-02906	1413348	PRJNA226301	226301	Terrabacteria group	Firmicutes	2.7601	32.7	-	JJER01	53	2895	2728	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391175	GCA_000636235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/235/GCA_000636235.1_Stap_aure_08-02906_V1	-	08-02906
Salmonella enterica	28901	PRJNA318666	318666	Proteobacteria	Gammaproteobacteria	4.95521	51.8	-	LWMC01	104	5115	4835	5/11/16	3/1/17	Contig	University of Malaya	SAMN04859615	GCA_001642515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/515/GCA_001642515.1_ASM164251v1	-	13
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41148	65.6	-	MQKL01	3	4289	4116	1/11/17	3/15/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06010488	GCA_001949085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/085/GCA_001949085.1_ASM194908v1	-	I0001192-9
Escherichia coli 3-020-07_S4_C2	1444248	PRJNA233905	233905	Proteobacteria	Gammaproteobacteria	5.26064	50.3	-	JNRS01	189	5649	5083	6/11/14	2/23/17	Contig	IGS	SAMN02680217	GCA_000704805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/805/GCA_000704805.1_ASM70480v1	-	3-020-07_S4_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05193	39.5	-	FYPG01	69	2238	2028	6/25/17	7/5/17	Contig	SC	SAMEA1026380	GCA_900191255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/255/GCA_900191255.1_6512_3_4	-	UoS3190
Klebsiella pneumoniae	573	PRJNA325704	325704	Proteobacteria	Gammaproteobacteria	5.40839	57.4	-	LZYA01	96	5335	4601	9/8/16	9/8/16	Scaffold	Christian Medical College	SAMN05250855	GCA_001721585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/721/585/GCA_001721585.1_ASM172158v1	-	BA253
Klebsiella pneumoniae	573	PRJNA340226	340226	Proteobacteria	Gammaproteobacteria	5.75309	56.8	-	MEBR01	170	5685	4865	9/23/16	9/23/16	Scaffold	Christian Medical College	SAMN05710263	GCA_001742865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/865/GCA_001742865.1_ASM174286v1	-	CMC_VB6753
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.13718	39.6	-	FYPH01	70	2365	2121	6/25/17	7/5/17	Contig	SC	SAMEA1026397	GCA_900191275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/275/GCA_900191275.1_6512_3_5	-	UoS3192
Escherichia coli 3-020-07_S4_C3	1444276	PRJNA233933	233933	Proteobacteria	Gammaproteobacteria	5.2984	50.4	-	JNRT01	162	5707	5157	6/11/14	2/23/17	Contig	IGS	SAMN02680205	GCA_000704825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/825/GCA_000704825.1_ASM70482v1	-	3-020-07_S4_C3
Mycobacterium tuberculosis	1773	PRJNA361211	361211	Terrabacteria group	Actinobacteria	4.3225	65.5	-	MUJU01	152	4276	4039	2/17/17	3/15/17	Contig	Vavilov Institute of General Genetics	SAMN06189363	GCA_002003715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/003/715/GCA_002003715.1_ASM200371v1	-	T11555
Salmonella enterica	28901	PRJNA318667	318667	Proteobacteria	Gammaproteobacteria	4.58133	52.3	-	LWMD01	134	4667	4382	5/11/16	3/1/17	Contig	University of Malaya	SAMN04859616	GCA_001642525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/525/GCA_001642525.1_ASM164252v1	-	14
Staphylococcus aureus 08134-6	1413597	PRJNA226552	226552	Terrabacteria group	Firmicutes	2.7648	32.8	-	JJEQ01	26	2869	2685	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391424	GCA_000636255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/255/GCA_000636255.1_Stap_aure_08134-6_V1	-	08134-6
Staphylococcus aureus 08139-6	1413598	PRJNA226553	226553	Terrabacteria group	Firmicutes	2.78099	32.9	-	JJEP01	42	2899	2701	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391425	GCA_000636275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/275/GCA_000636275.1_Stap_aure_08139-6_V1	-	08139-6
Salmonella enterica subsp. enterica serovar Nottingham	1173569	PRJNA242847	242847	Proteobacteria	Gammaproteobacteria	4.63637	52	-	LXIQ01	58	4735	4463	5/12/16	3/1/17	Contig	FDA	SAMN03965299	GCA_001642895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/895/GCA_001642895.1_CFSAN006803_01.0	-	3738 H
Mycobacterium tuberculosis	1773	PRJNA361210	361210	Terrabacteria group	Actinobacteria	4.3319	65.5	-	MUJT01	156	4278	4051	2/17/17	3/15/17	Contig	Vavilov Institute of General Genetics	SAMN06189364	GCA_002003745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/003/745/GCA_002003745.1_ASM200374v1	-	EKB_8
Escherichia coli 3-073-06_S1_C1	1444055	PRJNA233712	233712	Proteobacteria	Gammaproteobacteria	4.94539	50.6	-	JNRU01	82	5305	4851	6/11/14	2/23/17	Contig	IGS	SAMN02680192	GCA_000704845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/845/GCA_000704845.1_ASM70484v1	-	3-073-06_S1_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.02656	39.6	-	FYPK01	61	2190	1973	6/25/17	7/5/17	Contig	SC	SAMEA1026499	GCA_900191295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/295/GCA_900191295.1_6512_3_8	-	UoS3210
Klebsiella pneumoniae	573	PRJNA329475	329475	Proteobacteria	Gammaproteobacteria	5.80013	57	-	MBFY01	187	5754	4766	10/11/16	10/11/16	Scaffold	Christian Medical College	SAMN05413133	GCA_001756905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/905/GCA_001756905.1_ASM175690v1	-	B3789
Klebsiella pneumoniae	573	PRJNA335526	335526	Proteobacteria	Gammaproteobacteria	5.6116	57	-	MCFO01	171	5569	4589	10/12/16	10/12/16	Scaffold	Christian Medical College	SAMN05447356	GCA_001758405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/405/GCA_001758405.1_ASM175840v1	-	B1647
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06529	39.5	-	FYPL01	94	2286	2011	6/25/17	7/5/17	Contig	SC	SAMEA1026449	GCA_900191305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/305/GCA_900191305.1_6512_3_9	-	UoS3220
Escherichia coli 3-073-06_S1_C2	1444083	PRJNA233740	233740	Proteobacteria	Gammaproteobacteria	5.24825	50.9	-	JNRV01	274	5752	5025	6/11/14	2/23/17	Contig	IGS	SAMN02680241	GCA_000704865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/865/GCA_000704865.1_ASM70486v1	-	3-073-06_S1_C2
Mycobacterium tuberculosis	1773	PRJNA379996	379996	Terrabacteria group	Actinobacteria	4.29158	65.3	-	NARK01	264	4411	4079	4/12/17	4/17/17	Contig	"MedBiotech laboratory, faculty of medicine and pharmacy, rabat/ Mohamed V university rabat"	SAMN06624813	GCA_002087375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/375/GCA_002087375.1_ASM208737v1	-	MTB3
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA308909	308909	Proteobacteria	Gammaproteobacteria	4.69313	52.1	-	LSHA01	41	4807	4553	5/13/16	3/1/17	Contig	Universidad Mayor	SAMN04417439	GCA_001643395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/395/GCA_001643395.1_ASM164339v1	-	ATCC 13076
Staphylococcus aureus 08142-8	1413599	PRJNA226554	226554	Terrabacteria group	Firmicutes	2.82903	32.9	-	JJEO01	72	2989	2783	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391426	GCA_000636295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/295/GCA_000636295.1_Stap_aure_08142-8_V1	-	08142-8
Staphylococcus aureus 08143-5	1413600	PRJNA226555	226555	Terrabacteria group	Firmicutes	2.84461	32.9	-	JJEN01	75	3008	2790	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391427	GCA_000636315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/315/GCA_000636315.1_Stap_aure_08143-5_V1	-	08143-5
Salmonella enterica subsp. enterica	59201	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	4.91482	52.1	-	LSZE01	233	4986	4751	5/19/16	3/1/17	Contig	U.S. Food and Drug Administration	SAMN04500993	GCA_001647935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/935/GCA_001647935.1_ASM164793v1	-	SE819
Mycobacterium tuberculosis	1773	PRJNA379996	379996	Terrabacteria group	Actinobacteria	4.34166	65.4	-	NARM01	242	4403	4093	4/12/17	4/17/17	Contig	"MedBiotech laboratory, faculty of medicine and pharmacy, rabat/ Mohamed V university rabat"	SAMN06624811	GCA_002087415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/415/GCA_002087415.1_ASM208741v1	-	MTB1
Escherichia coli 3-073-06_S3_C1	1444138	PRJNA233795	233795	Proteobacteria	Gammaproteobacteria	5.18091	50.8	-	JNRW01	223	5792	5096	6/11/14	2/23/17	Contig	IGS	SAMN02680167	GCA_000704885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/885/GCA_000704885.1_ASM70488v1	-	3-073-06_S3_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03548	39.7	-	FYPQ01	52	2228	1961	6/25/17	7/5/17	Contig	SC	SAMEA1026822	GCA_900191345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/345/GCA_900191345.1_6512_3_13	-	UoS3233
Klebsiella pneumoniae	573	PRJNA335528	335528	Proteobacteria	Gammaproteobacteria	5.72634	56.9	-	MCFP01	263	5699	4591	10/12/16	10/12/16	Scaffold	Christian Medical College	SAMN05447360	GCA_001758485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/485/GCA_001758485.1_ASM175848v1	-	B20038
Klebsiella pneumoniae	573	PRJNA335529	335529	Proteobacteria	Gammaproteobacteria	5.69373	57	-	MCFQ01	226	5739	4756	10/12/16	10/12/16	Scaffold	Christian Medical College	SAMN05447361	GCA_001758505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/505/GCA_001758505.1_ASM175850v1	-	B20143
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.11938	39.5	-	FYPR01	61	2358	2081	6/25/17	7/5/17	Contig	SC	SAMEA1026330	GCA_900191365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/365/GCA_900191365.1_6512_3_15	-	UoS3235
Escherichia coli 3-073-06_S3_C2	1444166	PRJNA233823	233823	Proteobacteria	Gammaproteobacteria	5.2568	50.6	-	JNRX01	226	5869	5155	6/11/14	2/23/17	Contig	IGS	SAMN02687522	GCA_000704905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/905/GCA_000704905.1_ASM70490v1	-	3-073-06_S3_C2
Mycobacterium tuberculosis M13	1448838	PRJNA355994	355994	Terrabacteria group	Actinobacteria	4.34637	65.4	-	MRBH01	292	4473	4007	4/18/17	4/21/17	Contig	Univ Mohamed 5 Faculty of Medecine and pharmacy	SAMN06100257	GCA_002099275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/275/GCA_002099275.1_ASM209927v1	-	M13
Salmonella enterica	28901	PRJNA310698	310698	Proteobacteria	Gammaproteobacteria	4.84955	51.9	-	LRXZ01	91	4947	4691	5/20/16	3/1/17	Contig	University of Malaya	SAMN04453705	GCA_001648855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/855/GCA_001648855.1_ASM164885v1	-	6
Staphylococcus aureus 09S00475	1413355	PRJNA226308	226308	Terrabacteria group	Firmicutes	2.80117	32.9	-	JJEL01	42	2908	2723	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391182	GCA_000636335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/335/GCA_000636335.1_Stap_aure_09S00475_V1	-	09S00475
Staphylococcus aureus 10S01493	1413358	PRJNA226311	226311	Terrabacteria group	Firmicutes	2.86734	32.9	-	JJEH01	42	2995	2812	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391185	GCA_000636355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/355/GCA_000636355.1_Stap_aure_10S01493_V1	-	10S01493
Salmonella enterica	28901	PRJNA310696	310696	Proteobacteria	Gammaproteobacteria	4.72417	52.2	-	LRXY01	96	4829	4599	5/20/16	3/1/17	Contig	University of Malaya	SAMN04453696	GCA_001648865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/865/GCA_001648865.1_ASM164886v1	-	4
Mycobacterium tuberculosis	1773	PRJNA355550	355550	Terrabacteria group	Actinobacteria	4.4093	65.6	-	NCKT01	20	4276	4089	4/25/17	4/27/17	Contig	COMSATS Institute of Information Technology	SAMN06077019	GCA_002110345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/345/GCA_002110345.1_ASM211034v1	-	MNPK
Escherichia coli 2-427-07_S1_C1	1444043	PRJNA233700	233700	Proteobacteria	Gammaproteobacteria	4.70578	50.7	-	JNQV01	126	4922	4529	6/11/14	2/23/17	Contig	IGS	SAMN02680225	GCA_000704925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/925/GCA_000704925.1_ASM70492v1	-	2-427-07_S1_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06081	39.5	-	FYPU01	52	2216	2013	6/25/17	7/5/17	Contig	SC	SAMEA1026841	GCA_900191425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/425/GCA_900191425.1_6512_3_22	-	UoS3251
Klebsiella pneumoniae	573	PRJNA329474	329474	Proteobacteria	Gammaproteobacteria	5.57638	57.2	-	MBQC01	143	5518	4407	10/17/16	10/17/16	Scaffold	Christian Medical College	SAMN05413132	GCA_001766695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/695/GCA_001766695.1_ASM176669v1	-	B3639
Klebsiella pneumoniae	573	PRJNA330589	330589	Proteobacteria	Gammaproteobacteria	5.3812	57.1	-	MBQB01	1343	5082	2409	10/17/16	10/17/16	Scaffold	Christian Medical College	SAMN05417749	GCA_001766715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/715/GCA_001766715.1_ASM176671v1	-	B14343
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.98384	39.7	-	FYQB01	40	2145	1944	6/25/17	7/5/17	Contig	SC	SAMEA1026827	GCA_900191455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/455/GCA_900191455.1_6512_3_23	-	UoS3252
Escherichia coli 3-073-06_S4_C2	1444249	PRJNA233906	233906	Proteobacteria	Gammaproteobacteria	4.8319	50.8	-	JNRY01	112	4992	4575	6/11/14	2/23/17	Contig	IGS	SAMN02680245	GCA_000704945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/945/GCA_000704945.1_ASM70494v1	-	3-073-06_S4_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38582	65.6	-	MRDS01	11	4268	4066	5/11/17	5/22/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094072	GCA_002128795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/795/GCA_002128795.1_ASM212879v1	-	02-R0014
Salmonella enterica subsp. enterica serovar Agona str. 400100 30-11	1072602	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73529	52.1	-	LXTO01	145	4845	4428	5/21/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN01816158	GCA_001649455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/455/GCA_001649455.1_ASM164945v1	-	400100 30-11
Staphylococcus aureus 110802495	1413423	PRJNA226376	226376	Terrabacteria group	Firmicutes	2.74275	32.9	-	JJEG01	30	2840	2656	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391250	GCA_000636375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/375/GCA_000636375.1_Stap_aure_110802495_V1	-	110802495
Staphylococcus aureus 1110601704	1413418	PRJNA226371	226371	Terrabacteria group	Firmicutes	2.7871	32.9	-	JJEF01	50	2877	2679	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391245	GCA_000636395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/395/GCA_000636395.1_Stap_aure_1110601704_V1	-	1110601704
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.87548	52.1	-	LXNM01	69	5028	4773	5/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03742073	GCA_001652385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/385/GCA_001652385.1_CFSAN033950_02.0	-	CFSAN033950
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39274	65.6	-	MRDU01	6	4262	4093	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094074	GCA_002128845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/845/GCA_002128845.1_ASM212884v1	-	02-R0924
Escherichia coli 3-073-06_S4_C3	1444277	PRJNA233934	233934	Proteobacteria	Gammaproteobacteria	5.36156	50.8	-	JNRZ01	225	5843	5222	6/11/14	2/23/17	Contig	IGS	SAMN02680092	GCA_000704965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/965/GCA_000704965.1_ASM70496v1	-	3-073-06_S4_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.12829	39.6	-	FYQZ01	53	2367	2153	6/25/17	7/5/17	Contig	SC	SAMEA1026734	GCA_900191465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/465/GCA_900191465.1_6512_4_5	-	UoS3264
Klebsiella pneumoniae	573	PRJNA342515	342515	Proteobacteria	Gammaproteobacteria	5.71649	57.2	-	MLCD01	877	5632	3285	10/18/16	10/18/16	Scaffold	Christian Medical College	SAMN05761708	GCA_001777135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/777/135/GCA_001777135.1_ASM177713v1	-	B6418
Klebsiella pneumoniae	573	PRJNA340354	340354	Proteobacteria	Gammaproteobacteria	5.5696	57	-	MDZG01	141	5528	4765	11/7/16	11/7/16	Scaffold	Christian Medical College	SAMN05712736	GCA_001870615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/615/GCA_001870615.1_ASM187061v1	-	CMC_VB4175
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05942	39.5	-	FYQU01	57	2253	2003	6/25/17	7/5/17	Contig	SC	SAMEA1026626	GCA_900191515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/515/GCA_900191515.1_6512_4_7	-	UoS3271
Escherichia coli 3-105-05_S1_C2	1444084	PRJNA233741	233741	Proteobacteria	Gammaproteobacteria	5.04801	51	-	JNSA01	229	5470	4776	6/11/14	2/23/17	Contig	IGS	SAMN02680202	GCA_000704985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/704/985/GCA_000704985.1_ASM70498v1	-	3-105-05_S1_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39286	65.6	-	MRDV01	7	4271	4088	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094075	GCA_002128865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/865/GCA_002128865.1_ASM212886v1	-	02-R1752
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA308924	308924	Proteobacteria	Gammaproteobacteria	4.73623	52.1	-	LSHG01	61	4873	4604	6/3/16	3/1/17	Contig	Universidad Mayor	SAMN04417547	GCA_001655705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/655/705/GCA_001655705.1_ASM165570v1	-	f3r
Staphylococcus aureus 1110601896	1413419	PRJNA226372	226372	Terrabacteria group	Firmicutes	2.75053	32.9	-	JJEE01	29	2848	2665	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391246	GCA_000636415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/415/GCA_000636415.1_Stap_aure_1110601896_V1	-	1110601896
Staphylococcus aureus 1110700562	1413420	PRJNA226373	226373	Terrabacteria group	Firmicutes	2.71434	32.9	-	JJED01	30	2812	2631	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391247	GCA_000636435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/435/GCA_000636435.1_Stap_aure_1110700562_V1	-	1110700562
Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002063	1299043	PRJNA191768	191768	Proteobacteria	Gammaproteobacteria	4.79187	52	-	AURM01	34	4887	4642	7/7/16	3/1/17	Contig	FDA	SAMN01933201	GCA_001682115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/682/115/GCA_001682115.1_ASM168211v1	-	CFSAN002063
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39767	65.6	-	MREB01	31	4278	4106	5/11/17	5/22/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094081	GCA_002128905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/905/GCA_002128905.1_ASM212890v1	-	01-R0226
Escherichia coli 3-105-05_S1_C3	1444110	PRJNA233767	233767	Proteobacteria	Gammaproteobacteria	5.23931	51	-	JNSB01	187	5665	4984	6/11/14	2/23/17	Contig	IGS	SAMN02680226	GCA_000705005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/005/GCA_000705005.1_ASM70500v1	-	3-105-05_S1_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06956	39.6	-	FYQO01	64	2301	2085	6/25/17	7/5/17	Contig	SC	SAMEA1026572	GCA_900191525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/525/GCA_900191525.1_6512_4_23	-	UoS3326
Klebsiella pneumoniae	573	PRJNA342016	342016	Proteobacteria	Gammaproteobacteria	5.70412	56.8	-	MOXM01	207	5606	4736	11/10/16	11/10/16	Scaffold	Christian Medical College	SAMN05732391	GCA_001875535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/535/GCA_001875535.1_ASM187553v1	-	CMC_VB13923
Klebsiella pneumoniae	573	PRJNA342019	342019	Proteobacteria	Gammaproteobacteria	5.55881	57	-	MOXN01	124	5501	4781	11/10/16	11/10/16	Scaffold	Christian Medical College	SAMN05732395	GCA_001875545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/545/GCA_001875545.1_ASM187554v1	-	CMC_VB5505
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05619	39.5	-	FYQK01	48	2218	2019	6/25/17	7/5/17	Contig	SC	SAMEA1026762	GCA_900191545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/545/GCA_900191545.1_6512_4_2	-	UoS3257
Escherichia coli	562	PRJNA238907	238907	Proteobacteria	Gammaproteobacteria	5.01444	50.6	-	JFJM01	64	5135	4885	6/16/14	2/23/17	Contig	USFDA	SAMN02647028	GCA_000708145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/145/GCA_000708145.1_E_coli_EC1.contigs	-	EC1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39128	65.6	-	MREJ01	10	4272	4102	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094089	GCA_002128935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/935/GCA_002128935.1_ASM212893v1	-	00-R1245-2
Salmonella enterica	28901	PRJNA327739	327739	Proteobacteria	Gammaproteobacteria	4.55465	52.2	-	MATA01	36	4585	4352	7/22/16	3/1/17	Contig	Health Canada	SAMN05356917	GCA_001691905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/905/GCA_001691905.1_ASM169190v1	-	F7
Staphylococcus aureus 1110700610	1413421	PRJNA226374	226374	Terrabacteria group	Firmicutes	2.75989	32.9	-	JJEC01	31	2850	2681	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391248	GCA_000636455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/455/GCA_000636455.1_Stap_aure_1110700610_V1	-	1110700610
Staphylococcus aureus 1110701127	1413422	PRJNA226375	226375	Terrabacteria group	Firmicutes	2.74165	32.9	-	JJEB01	42	2837	2655	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391249	GCA_000636475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/475/GCA_000636475.1_Stap_aure_1110701127_V1	-	1110701127
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA327743	327743	Proteobacteria	Gammaproteobacteria	4.58781	52.3	-	MATC01	38	4629	4397	7/22/16	3/1/17	Contig	Health Canada	SAMN05356921	GCA_001691915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/915/GCA_001691915.1_ASM169191v1	-	SI02
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40907	65.6	-	MREM01	5	4289	4108	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094092	GCA_002128945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/945/GCA_002128945.1_ASM212894v1	-	01-R0746
Escherichia coli	562	PRJNA238907	238907	Proteobacteria	Gammaproteobacteria	5.01813	50.5	-	JFJL01	76	5136	4891	6/16/14	2/23/17	Contig	USFDA	SAMN02647029	GCA_000708165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/165/GCA_000708165.1_E_coli_EC2.contigs	-	EC2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.99465	39.7	-	FYQN01	53	2192	1987	6/25/17	7/5/17	Contig	SC	SAMEA1026601	GCA_900191555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/555/GCA_900191555.1_6512_4_24	-	UoS4002
Klebsiella pneumoniae	573	PRJNA343693	343693	Proteobacteria	Gammaproteobacteria	5.5283	57.1	-	MNPA01	216	5469	4841	11/16/16	11/16/16	Scaffold	Christian Medical College	SAMN05792399	GCA_001879315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/315/GCA_001879315.1_ASM187931v1	-	PM1168
Klebsiella pneumoniae	573	PRJNA343703	343703	Proteobacteria	Gammaproteobacteria	5.72025	56.9	-	MNPF01	303	5639	4514	11/16/16	11/16/16	Scaffold	Christian Medical College	SAMN05792418	GCA_001879325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/325/GCA_001879325.1_ASM187932v1	-	PM1134
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.0183	39.7	-	FYQR01	41	2227	2007	6/25/17	7/5/17	Contig	SC	SAMEA1026522	GCA_900191565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/565/GCA_900191565.1_6512_5_3	-	UoS4012
Escherichia coli 2-427-07_S4_C3	1444266	PRJNA233923	233923	Proteobacteria	Gammaproteobacteria	5.73293	50.6	-	JOMY01	227	6280	5679	6/24/14	2/23/17	Contig	IGS	SAMN02689039	GCA_000711355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/355/GCA_000711355.1_ASM71135v1	-	2-427-07_S4_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38497	65.6	-	MREQ01	13	4256	4090	5/11/17	5/22/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094096	GCA_002129005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/005/GCA_002129005.1_ASM212900v1	-	01-R0817
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA327743	327743	Proteobacteria	Gammaproteobacteria	4.80803	52.1	-	MATK01	53	4915	4681	7/22/16	3/1/17	Contig	Health Canada	SAMN05356929	GCA_001691985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/985/GCA_001691985.1_ASM169198v1	-	STy02
Staphylococcus aureus 1110802883	1413424	PRJNA226377	226377	Terrabacteria group	Firmicutes	2.71959	32.9	-	JJEA01	31	2792	2633	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391251	GCA_000636495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/495/GCA_000636495.1_Stap_aure_1110802883_V1	-	1110802883
Staphylococcus aureus 1110803248	1413425	PRJNA226378	226378	Terrabacteria group	Firmicutes	2.78045	32.7	-	JJDZ01	62	2893	2733	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391252	GCA_000636515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/515/GCA_000636515.1_Stap_aure_1110803248_V1	-	1110803248
Salmonella enterica subsp. enterica serovar Montevideo	115981	PRJNA327743	327743	Proteobacteria	Gammaproteobacteria	4.60746	52.2	-	MATE01	25	4683	4442	7/22/16	3/1/17	Contig	Health Canada	SAMN05356923	GCA_001692045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/045/GCA_001692045.1_ASM169204v1	-	SMo02
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35666	65.6	-	MRES01	4	4236	4073	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094098	GCA_002129025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/025/GCA_002129025.1_ASM212902v1	-	01-R0448
Escherichia coli 8-415-05_S4_C2	1444242	PRJNA233899	233899	Proteobacteria	Gammaproteobacteria	5.24515	50.5	-	JOMU01	128	5465	4986	6/24/14	2/23/17	Contig	IGS	SAMN02680228	GCA_000711365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/365/GCA_000711365.1_ASM71136v1	-	8-415-05_S4_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.0125	39.7	-	FYQD01	48	2217	2010	6/25/17	7/5/17	Contig	SC	SAMEA1026482	GCA_900191575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/575/GCA_900191575.1_6512_5_5	-	UoS4020
Klebsiella pneumoniae	573	PRJNA343699	343699	Proteobacteria	Gammaproteobacteria	5.41618	57.1	-	MNPE01	284	5325	4340	11/16/16	11/16/16	Scaffold	Christian Medical College	SAMN05792415	GCA_001879335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/335/GCA_001879335.1_ASM187933v1	-	PM5186
Klebsiella pneumoniae	573	PRJNA343698	343698	Proteobacteria	Gammaproteobacteria	5.57569	56.9	-	MNPD01	149	5631	4945	11/16/16	11/16/16	Scaffold	Christian Medical College	SAMN05792413	GCA_001879345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/345/GCA_001879345.1_ASM187934v1	-	PM1995
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.12253	39.7	-	FYQS01	54	2273	1991	6/25/17	7/5/17	Contig	SC	SAMEA1026615	GCA_900191585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/585/GCA_900191585.1_6512_4_6	-	UoS3267
Escherichia coli 6-175-07_S1_C2	1444089	PRJNA233746	233746	Proteobacteria	Gammaproteobacteria	5.31154	50.5	-	JOMS01	145	5629	5091	6/24/14	2/23/17	Contig	IGS	SAMN02680203	GCA_000711375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/375/GCA_000711375.1_ASM71137v1	-	6-175-07_S1_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35286	65.6	-	MREV01	24	4249	4070	5/11/17	5/22/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094101	GCA_002129065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/065/GCA_002129065.1_ASM212906v1	-	03-R0419
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA327743	327743	Proteobacteria	Gammaproteobacteria	4.63131	52.2	-	MATF01	19	4685	4452	7/22/16	3/1/17	Contig	Health Canada	SAMN05356924	GCA_001692085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/085/GCA_001692085.1_ASM169208v1	-	SMu01
Staphylococcus aureus 1110807699	1413426	PRJNA226379	226379	Terrabacteria group	Firmicutes	2.73691	32.9	-	JJDY01	26	2830	2656	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391253	GCA_000636535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/535/GCA_000636535.1_Stap_aure_1110807699_V1	-	1110807699
Staphylococcus aureus 1110904178	1413427	PRJNA226380	226380	Terrabacteria group	Firmicutes	2.76919	32.8	-	JJDX01	42	2881	2693	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391254	GCA_000636555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/555/GCA_000636555.1_Stap_aure_1110904178_V1	-	1110904178
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA327743	327743	Proteobacteria	Gammaproteobacteria	4.75875	52.2	-	MATH01	34	4873	4627	7/22/16	3/1/17	Contig	Health Canada	SAMN05356926	GCA_001692105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/105/GCA_001692105.1_ASM169210v1	-	STh01
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38281	65.6	-	MRFB01	9	4256	4088	5/11/17	5/22/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094107	GCA_002129085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/085/GCA_002129085.1_ASM212908v1	-	02-R1811
Escherichia coli 2-316-03_S1_C2	1444071	PRJNA233728	233728	Proteobacteria	Gammaproteobacteria	5.3416	50.7	-	JOMX01	162	5642	5185	6/24/14	2/23/17	Contig	IGS	SAMN02689038	GCA_000711415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/415/GCA_000711415.1_ASM71141v1	-	2-316-03_S1_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07756	39.5	-	FYRB01	75	2291	2073	6/25/17	7/5/17	Contig	SC	SAMEA1026746	GCA_900191595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/595/GCA_900191595.1_6512_4_15	-	UoS3299
Klebsiella pneumoniae	573	PRJNA343705	343705	Proteobacteria	Gammaproteobacteria	5.75334	56.9	-	MNPG01	509	5744	4688	11/16/16	11/16/16	Scaffold	Christian Medical College	SAMN05792428	GCA_001879415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/415/GCA_001879415.1_ASM187941v1	-	PM138
Klebsiella pneumoniae	573	PRJNA343707	343707	Proteobacteria	Gammaproteobacteria	5.70799	56.9	-	MNPH01	224	5624	4660	11/16/16	11/16/16	Scaffold	Christian Medical College	SAMN05792433	GCA_001879425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/425/GCA_001879425.1_ASM187942v1	-	PM716
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03735	39.6	-	FYQT01	54	2210	2008	6/25/17	7/5/17	Contig	SC	SAMEA1026836	GCA_900191605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/605/GCA_900191605.1_6512_4_12	-	UoS3287
Escherichia coli 8-415-05_S4_C3	1444271	PRJNA233928	233928	Proteobacteria	Gammaproteobacteria	5.32944	50.5	-	JOMV01	139	5563	5091	6/24/14	2/23/17	Contig	IGS	SAMN02680131	GCA_000711435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/435/GCA_000711435.1_ASM71143v1	-	8-415-05_S4_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38162	65.6	-	MREZ01	11	4254	4088	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094105	GCA_002129095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/095/GCA_002129095.1_ASM212909v1	-	01-R1441
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA327743	327743	Proteobacteria	Gammaproteobacteria	4.80832	52.1	-	MATL01	49	4939	4660	7/22/16	3/1/17	Contig	Health Canada	SAMN05356930	GCA_001692145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/145/GCA_001692145.1_ASM169214v1	-	STy03
Staphylococcus aureus 1111000175	1413428	PRJNA226381	226381	Terrabacteria group	Firmicutes	2.7461	32.7	-	JJDW01	47	2836	2675	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391255	GCA_000636575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/575/GCA_000636575.1_Stap_aure_1111000175_V1	-	1111000175
Staphylococcus aureus 1111000177	1413429	PRJNA226382	226382	Terrabacteria group	Firmicutes	2.73954	32.7	-	JJDV01	61	2831	2666	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391256	GCA_000636595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/595/GCA_000636595.1_Stap_aure_1111000177_V1	-	1111000177
Salmonella enterica subsp. enterica serovar Javiana str. CFSAN000905	1299231	PRJNA192057	192057	Proteobacteria	Gammaproteobacteria	4.58063	52.1	-	MAIX01	26	4661	4412	8/18/16	3/1/17	Contig	FDA	SAMN01938999	GCA_001707555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/555/GCA_001707555.1_ASM170755v1	-	CFSAN000905
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41492	65.6	-	MREX01	7	4284	4106	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094103	GCA_002129105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/105/GCA_002129105.1_ASM212910v1	-	01-R1539
Escherichia coli 8-415-05_S4_C1	1444214	PRJNA233871	233871	Proteobacteria	Gammaproteobacteria	5.27585	50.5	-	JOMT01	141	5560	5075	6/24/14	2/23/17	Contig	IGS	SAMN02680154	GCA_000711455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/455/GCA_000711455.1_ASM71145v1	-	8-415-05_S4_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09705	39.6	-	FYQV01	51	2328	2119	6/25/17	7/5/17	Contig	SC	SAMEA1026610	GCA_900191615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/615/GCA_900191615.1_6512_4_21	-	UoS3324
Klebsiella pneumoniae	573	PRJNA342018	342018	Proteobacteria	Gammaproteobacteria	5.8519	56.7	-	MPCT01	211	5805	4884	12/8/16	12/8/16	Scaffold	Christian Medical College	SAMN05732393	GCA_001891185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/185/GCA_001891185.1_ASM189118v1	-	CMC_VB34444
Klebsiella pneumoniae	573	PRJNA341827	341827	Proteobacteria	Gammaproteobacteria	5.77642	56.7	-	MIEJ01	204	5688	5063	12/12/16	12/12/16	Scaffold	Christian Medical College	SAMN05729271	GCA_001901585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/585/GCA_001901585.1_ASM190158v1	-	B16470
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.13232	39.5	-	FYRE01	78	2345	2084	6/25/17	7/5/17	Contig	SC	SAMEA1026535	GCA_900191625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/625/GCA_900191625.1_6512_5_2	-	UoS4011
Escherichia coli 2-316-03_S1_C1	1444042	PRJNA233699	233699	Proteobacteria	Gammaproteobacteria	5.39615	50.7	-	JOMW01	196	5735	5243	6/24/14	2/23/17	Contig	IGS	SAMN02689037	GCA_000711475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/475/GCA_000711475.1_ASM71147v1	-	2-316-03_S1_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36777	65.6	-	MRFK01	14	4257	4086	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094116	GCA_002129145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/145/GCA_002129145.1_ASM212914v1	-	02-R0967
Salmonella enterica subsp. enterica serovar Montevideo str. 609458-2	1173869	PRJNA161665	161665	Proteobacteria	Gammaproteobacteria	4.65695	52.2	-	MAIW01	30	4721	4471	8/18/16	3/1/17	Contig	FDA	SAMN00990767	GCA_001707585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/585/GCA_001707585.1_ASM170758v1	-	609458-2
Staphylococcus aureus 1111100370	1413431	PRJNA226384	226384	Terrabacteria group	Firmicutes	2.72387	32.7	-	JJDT01	56	2801	2641	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391258	GCA_000636615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/615/GCA_000636615.1_Stap_aure_1111100370_V1	-	1111100370
Staphylococcus aureus 1111101949	1413432	PRJNA226385	226385	Terrabacteria group	Firmicutes	2.72041	32.9	-	JJDS01	28	2832	2656	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391259	GCA_000636635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/635/GCA_000636635.1_Stap_aure_1111101949_V1	-	1111101949
Salmonella enterica subsp. enterica	59201	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.68915	52.1	-	MAJA01	34	4776	4548	8/18/16	3/1/17	Contig	FDA/CFSAN	SAMN02709277	GCA_001707605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/605/GCA_001707605.1_ASM170760v1	-	CFSAN003959
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38582	65.6	-	MRFP01	12	4260	4087	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094121	GCA_002129165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/165/GCA_002129165.1_ASM212916v1	-	01-R0379
Escherichia coli 2-460-02_S1_C3	1444100	PRJNA233757	233757	Proteobacteria	Gammaproteobacteria	5.54419	50.7	-	JOMZ01	122	5934	5467	6/24/14	2/23/17	Contig	IGS	SAMN02689042	GCA_000711485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/485/GCA_000711485.1_ASM71148v1	-	2-460-02_S1_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09596	39.5	-	FYQA01	65	2296	2076	6/25/17	7/5/17	Contig	SC	SAMEA1026815	GCA_900191635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/635/GCA_900191635.1_6512_4_10	-	UoS3284
Klebsiella pneumoniae subsp. pneumoniae KpO3210	1232392	PRJNA175243	175243	Proteobacteria	Gammaproteobacteria	5.14726	56.9	-	AMRH01	6704	-	-	10/1/12	11/19/13	Contig	BIOMOL-INFORMATICS S.L.	SAMN01731171	GCA_000300735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/300/735/GCA_000300735.2_ASM30073v2	23209233	KpO3210
Klebsiella pneumoniae HSL4	1294269	PRJNA189496	189496	Proteobacteria	Gammaproteobacteria	5.2212	57.5	-	APFG01	210	-	-	4/2/13	1/8/14	Contig	"South China Sea Institute of Oceanology, Chinese Academy of Sciences"	SAMN02470999	GCA_000350325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/325/GCA_000350325.1_Kleb_v1.0	23661476	HSL4
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07874	39.5	-	FYQM01	62	2268	2024	6/25/17	7/5/17	Contig	SC	SAMEA1026497	GCA_900191645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/645/GCA_900191645.1_6512_5_4	-	UoS4015
Escherichia coli 3-020-07_S3_C2	1444165	PRJNA233822	233822	Proteobacteria	Gammaproteobacteria	5.63337	50.6	-	JONB01	249	6152	5502	6/24/14	2/23/17	Contig	IGS	SAMN02689044	GCA_000711515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/515/GCA_000711515.1_ASM71151v1	-	3-020-07_S3_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35872	65.6	-	MRFQ01	6	4250	4087	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094122	GCA_002129205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/205/GCA_002129205.1_ASM212920v1	-	02-R0213
Salmonella enterica subsp. enterica	59201	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.70067	52.2	-	MAJB01	41	4737	4524	8/18/16	3/1/17	Contig	FDA/CFSAN	SAMN02709328	GCA_001707615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/615/GCA_001707615.1_ASM170761v1	-	CFSAN004090
Staphylococcus aureus 1111102620	1413433	PRJNA226386	226386	Terrabacteria group	Firmicutes	2.73719	32.9	-	JJDR01	33	2845	2664	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391260	GCA_000636655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/655/GCA_000636655.1_Stap_aure_1111102620_V1	-	1111102620
Staphylococcus aureus 1111200013	1413434	PRJNA226387	226387	Terrabacteria group	Firmicutes	2.80112	32.9	-	JJDQ01	44	2891	2697	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391261	GCA_000636675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/675/GCA_000636675.1_Stap_aure_1111200013_V1	-	1111200013
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.82346	52.1	-	MAIZ01	53	4950	4695	8/18/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03463856	GCA_001707695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/695/GCA_001707695.1_ASM170769v1	-	CFSAN003345
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40157	65.6	-	MRFT01	27	4288	4089	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094130	GCA_002129245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/245/GCA_002129245.1_ASM212924v1	-	M0006159-9
Escherichia coli 6-175-07_S3_C2	1444172	PRJNA233829	233829	Proteobacteria	Gammaproteobacteria	5.67227	50.5	-	JONF01	123	6016	5513	6/24/14	2/23/17	Contig	IGS	SAMN02689050	GCA_000711525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/525/GCA_000711525.1_ASM71152v1	-	6-175-07_S3_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05714	39.6	-	FYQG01	56	2249	2030	6/25/17	7/5/17	Contig	SC	SAMEA1026612	GCA_900191655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/655/GCA_900191655.1_6512_4_20	-	UoS3321
Klebsiella pneumoniae subsp. pneumoniae KpMDU1	1228988	PRJNA174122	174122	Proteobacteria	Gammaproteobacteria	5.69825	56.8	-	AMWO01	521	5618	5527	4/18/13	4/18/13	Contig	University of Melbourne	SAMN01162360	GCA_000367465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/367/465/GCA_000367465.1_KpMDU1.1	-	KpMDU1
Klebsiella pneumoniae IS33	1432550	PRJEB4809	232416	Proteobacteria	Gammaproteobacteria	5.79083	56.9	-	CBWI01	427	-	5961	1/2/14	1/30/15	Contig	AIT	SAMEA3138852	GCA_000529325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/325/GCA_000529325.1_IS33v1	-	IS33
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09906	39.5	-	FYQQ01	58	2302	2086	6/25/17	7/5/17	Contig	SC	SAMEA1026704	GCA_900191665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/665/GCA_900191665.1_6512_4_13	-	UoS3293
Escherichia coli 3-020-07_S4_C1	1444220	PRJNA233877	233877	Proteobacteria	Gammaproteobacteria	5.69137	50.6	-	JONC01	128	6059	5538	6/24/14	2/23/17	Contig	IGS	SAMN02689045	GCA_000711555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/555/GCA_000711555.1_ASM71155v1	-	3-020-07_S4_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39354	65.6	-	MRFW01	4	4270	4083	5/11/17	5/22/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094133	GCA_002129265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/265/GCA_002129265.1_ASM212926v1	-	M0005012-1
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001111	1299160	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.77395	52.2	-	MAIY01	23	4836	4603	8/18/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN01939014	GCA_001707735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/707/735/GCA_001707735.1_ASM170773v1	-	CFSAN001111
Staphylococcus aureus 1111203374	1413435	PRJNA226388	226388	Terrabacteria group	Firmicutes	2.75229	32.9	-	JJDP01	45	2864	2681	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391262	GCA_000636695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/695/GCA_000636695.1_Stap_aure_1111203374_V1	-	1111203374
Staphylococcus aureus 1111205429	1413436	PRJNA226389	226389	Terrabacteria group	Firmicutes	2.79356	32.9	-	JJDO01	56	2895	2700	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391263	GCA_000636715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/715/GCA_000636715.1_Stap_aure_1111205429_V1	-	1111205429
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.75093	52	-	LYZJ01	30	4881	4606	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05180023	GCA_001713515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/515/GCA_001713515.1_ASM171351v1	-	CFSAN008104
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40469	65.6	-	MRFZ01	18	4293	4095	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094136	GCA_002129275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/275/GCA_002129275.1_ASM212927v1	-	M0011773-0
Escherichia coli 2-460-02_S4_C1	1444209	PRJNA233866	233866	Proteobacteria	Gammaproteobacteria	5.54197	50.6	-	JONA01	174	6033	5457	6/24/14	2/23/17	Contig	IGS	SAMN02689043	GCA_000711565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/565/GCA_000711565.1_ASM71156v1	-	2-460-02_S4_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06663	39.6	-	FYQL01	56	2277	2049	6/25/17	7/5/17	Contig	SC	SAMEA1026618	GCA_900191675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/675/GCA_900191675.1_6512_4_22	-	UoS3325
Klebsiella pneumoniae IS39	1432561	PRJEB4821	232424	Proteobacteria	Gammaproteobacteria	4.51898	55.6	-	CBWU01	990	-	5338	1/2/14	1/30/15	Contig	AIT	SAMEA3138855	GCA_000529425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/425/GCA_000529425.1_IS39v1	-	IS39
Klebsiella pneumoniae IS10	1411646	PRJEB4777	232025	Proteobacteria	Gammaproteobacteria	4.13554	54.6	-	CBWD01	1888	-	4428	1/2/14	1/30/15	Contig	AIT	SAMEA3138856	GCA_000529485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/485/GCA_000529485.1_IS10v1	-	-
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03289	39.6	-	FYQY01	48	2242	2008	6/25/17	7/5/17	Contig	SC	SAMEA1026642	GCA_900191685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/685/GCA_900191685.1_6512_4_18	-	UoS3314
Escherichia coli 3-267-03_S4_C1	1444223	PRJNA233880	233880	Proteobacteria	Gammaproteobacteria	5.64783	50.6	-	JOND01	238	6198	5643	6/24/14	2/23/17	Contig	IGS	SAMN02689048	GCA_000711595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/595/GCA_000711595.1_ASM71159v1	-	3-267-03_S4_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37625	65.6	-	MRGB01	8	4255	4074	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094138	GCA_002129305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/305/GCA_002129305.1_ASM212930v1	-	M0014890-9
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70103	52.1	-	LIIZ01	25	4811	4560	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079671	GCA_001713745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/745/GCA_001713745.1_ASM171374v1	-	CFSAN024726
Staphylococcus aureus 1111206270	1413437	PRJNA226390	226390	Terrabacteria group	Firmicutes	2.79548	32.9	-	JJDN01	44	2938	2742	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391264	GCA_000636735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/735/GCA_000636735.1_Stap_aure_1111206270_V1	-	1111206270
Staphylococcus aureus 11P4	1413587	PRJNA226542	226542	Terrabacteria group	Firmicutes	2.76818	32.9	-	JJDM01	34	2867	2682	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391414	GCA_000636755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/755/GCA_000636755.1_Stap_aure_11P4_V1	-	11P4
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70327	52.1	-	LILV01	26	4823	4563	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079672	GCA_001713755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/755/GCA_001713755.1_ASM171375v1	-	CFSAN024727
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40526	65.6	-	MRGF01	2	4283	4099	5/11/17	5/24/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094142	GCA_002129325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/325/GCA_002129325.1_ASM212932v1	-	M0003422-4
Escherichia coli 5-366-08_S1_C3	1444102	PRJNA233759	233759	Proteobacteria	Gammaproteobacteria	5.44091	50.6	-	JONE01	109	5764	5323	6/24/14	2/23/17	Contig	IGS	SAMN02689046	GCA_000711605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/605/GCA_000711605.1_ASM71160v1	-	5-366-08_S1_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08044	39.6	-	FYQE01	59	2298	2067	6/25/17	7/5/17	Contig	SC	SAMEA1026675	GCA_900191695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/695/GCA_900191695.1_6512_4_16	-	UoS3300
Klebsiella pneumoniae IS53	1432554	PRJEB4813	232412	Proteobacteria	Gammaproteobacteria	4.55179	55.8	-	CBWM01	898	-	5325	1/2/14	1/30/15	Contig	AIT	SAMEA3138864	GCA_000529745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/745/GCA_000529745.1_IS53v1	-	IS53
Klebsiella pneumoniae IS43	1432552	PRJEB4811	232419	Proteobacteria	Gammaproteobacteria	4.84219	55.9	-	CBWK01	894	-	5986	1/2/14	1/30/15	Contig	AIT	SAMEA3138868	GCA_000529895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/895/GCA_000529895.1_IS43v1	-	IS43
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05553	39.6	-	FYQW01	56	2264	2054	6/25/17	7/5/17	Contig	SC	SAMEA1026792	GCA_900191715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/715/GCA_900191715.1_6512_2_6	-	UoS3109
Escherichia coli 6-319-05_S1_C3	1444115	PRJNA233772	233772	Proteobacteria	Gammaproteobacteria	5.33862	50.8	-	JORE01	220	5831	5276	6/27/14	2/23/17	Contig	IGS	SAMN02687524	GCA_000713015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/015/GCA_000713015.1_ASM71301v1	-	6-319-05_S1_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40159	65.6	-	MRGG01	3	4280	4115	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094143	GCA_002129345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/345/GCA_002129345.1_ASM212934v1	-	M0004607-9
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70312	52.1	-	LILS01	44	4822	4570	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079675	GCA_001713775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/775/GCA_001713775.1_ASM171377v1	-	CFSAN024730
Staphylococcus aureus 11P8	1413588	PRJNA226543	226543	Terrabacteria group	Firmicutes	2.82821	32.9	-	JJDL01	45	2944	2765	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391415	GCA_000636775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/775/GCA_000636775.1_Stap_aure_11P8_V1	-	11P8
Staphylococcus aureus 11S00605	1413359	PRJNA226312	226312	Terrabacteria group	Firmicutes	2.73899	32.7	-	JJDK01	51	2833	2675	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391186	GCA_000636795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/795/GCA_000636795.1_Stap_aure_11S00605_V1	-	11S00605
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70095	52.1	-	LILR01	27	4815	4563	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079676	GCA_001713785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/785/GCA_001713785.1_ASM171378v1	-	CFSAN024731
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39628	65.6	-	MRGI01	1	4268	4112	5/11/17	5/22/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094145	GCA_002129365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/365/GCA_002129365.1_ASM212936v1	-	M0009182-8
Escherichia coli 6-319-05_S1_C2	1444090	PRJNA233747	233747	Proteobacteria	Gammaproteobacteria	5.16697	50.9	-	JORD01	192	5608	5107	6/27/14	2/23/17	Contig	IGS	SAMN02680165	GCA_000713025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/025/GCA_000713025.1_ASM71302v1	-	6-319-05_S1_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.99899	39.7	-	FYQJ01	53	2228	1973	6/25/17	7/5/17	Contig	SC	SAMEA1026442	GCA_900191755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/755/GCA_900191755.1_6512_5_7	-	UoS4027
Klebsiella pneumoniae IS46	1432553	PRJEB4812	232425	Proteobacteria	Gammaproteobacteria	4.67912	55.5	-	CBWL01	957	-	5409	1/2/14	1/30/15	Contig	AIT	SAMEA3138869	GCA_000529945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/945/GCA_000529945.1_IS46v1	-	IS46
Klebsiella pneumoniae IS22	1432547	PRJEB4805	232420	Proteobacteria	Gammaproteobacteria	10.4528	54.1	-	CBWF01	1410	-	10999	1/2/14	1/30/15	Contig	AIT	SAMEA3138872	GCA_000530055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/055/GCA_000530055.1_IS22v1	-	IS22
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05804	39.8	-	FYRF01	49	2279	2061	6/25/17	7/5/17	Contig	SC	SAMEA1026456	GCA_900191765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/765/GCA_900191765.1_6512_5_8	-	UoS4028
Escherichia coli 6-319-05_S3_C2	1444173	PRJNA233830	233830	Proteobacteria	Gammaproteobacteria	5.36396	50.5	-	JORG01	129	5770	5274	6/27/14	2/23/17	Contig	IGS	SAMN02687486	GCA_000713035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/035/GCA_000713035.1_ASM71303v1	-	6-319-05_S3_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39561	65.6	-	MRGL01	8	4275	4113	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094148	GCA_002129385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/385/GCA_002129385.1_ASM212938v1	-	M0021595-5
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70305	52.1	-	LILQ01	28	4808	4568	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079677	GCA_001713825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/825/GCA_001713825.1_ASM171382v1	-	CFSAN024732
Staphylococcus aureus 11S00627	1413360	PRJNA226313	226313	Terrabacteria group	Firmicutes	2.80021	32.9	-	JJDJ01	31	2921	2737	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391187	GCA_000636815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/815/GCA_000636815.1_Stap_aure_11S00627_V1	-	11S00627
Staphylococcus aureus 11S01415	1413361	PRJNA226314	226314	Terrabacteria group	Firmicutes	2.77854	32.6	-	JJDI01	50	2885	2714	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391188	GCA_000636835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/835/GCA_000636835.1_Stap_aure_11S01415_V1	-	11S01415
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70242	52.1	-	LILP01	37	4811	4571	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079678	GCA_001713835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/835/GCA_001713835.1_ASM171383v1	-	CFSAN024733
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40116	65.6	-	MRGM01	4	4277	4111	5/11/17	5/22/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094149	GCA_002129405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/405/GCA_002129405.1_ASM212940v1	-	M0000382-3
Escherichia coli 6-319-05_S3_C1	1444145	PRJNA233802	233802	Proteobacteria	Gammaproteobacteria	5.3626	50.5	-	JORF01	113	5713	5240	6/27/14	2/23/17	Contig	IGS	SAMN02687497	GCA_000713045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/045/GCA_000713045.1_ASM71304v1	-	6-319-05_S3_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08027	39.6	-	FYRI01	54	2275	2041	6/25/17	7/5/17	Contig	SC	SAMEA1026598	GCA_900191795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/795/GCA_900191795.1_6512_5_10	-	UoS4032
Klebsiella pneumoniae ISC21	1432558	PRJEB4817	232423	Proteobacteria	Gammaproteobacteria	4.35834	55.2	-	CBWQ01	979	-	5457	1/2/14	1/30/15	Contig	AIT	SAMEA3138876	GCA_000530175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/175/GCA_000530175.1_ISC21v1	-	ISC21
Klebsiella pneumoniae subsp. pneumoniae JCM 1662	1236531	PRJDB619	243197	Proteobacteria	Gammaproteobacteria	5.47008	57	-	BAKZ01	201	-	-	4/1/14	9/16/15	Contig	The University of Tokyo	SAMD00009972	GCA_000614665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/665/GCA_000614665.1_ASM61466v1	-	JCM 1662
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07211	39.6	-	FYRJ01	52	2301	2057	6/25/17	7/5/17	Contig	SC	SAMEA1026609	GCA_900191805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/805/GCA_900191805.1_6512_5_11	-	UoS4036
Escherichia coli 6-319-05_S4_C2	1444256	PRJNA233913	233913	Proteobacteria	Gammaproteobacteria	5.06647	50.8	-	JORH01	208	5475	4864	6/27/14	2/23/17	Contig	IGS	SAMN02680251	GCA_000713095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/095/GCA_000713095.1_ASM71309v1	-	6-319-05_S4_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3926	65.6	-	MRGP01	1	4269	4108	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094152	GCA_002129425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/425/GCA_002129425.1_ASM212942v1	-	M0001638-7
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73479	52	-	LILN01	33	4866	4612	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079680	GCA_001713855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/855/GCA_001713855.1_ASM171385v1	-	CFSAN024735
Staphylococcus aureus 11S01586	1413363	PRJNA226316	226316	Terrabacteria group	Firmicutes	2.77558	32.9	-	JJDG01	32	2895	2713	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391190	GCA_000636855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/855/GCA_000636855.1_Stap_aure_11S01586_V1	-	11S01586
Staphylococcus aureus 12-03481	1413354	PRJNA226307	226307	Terrabacteria group	Firmicutes	2.70493	32.7	-	JJDF01	36	2834	2671	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391181	GCA_000636875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/875/GCA_000636875.1_Stap_aure_12-03481_V1	-	12-03481
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70095	52.1	-	LIMD01	26	4806	4562	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079681	GCA_001713875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/875/GCA_001713875.1_ASM171387v1	-	CFSAN024736
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41175	65.6	-	MRGR01	1	4294	4132	5/11/17	5/24/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094154	GCA_002129445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/445/GCA_002129445.1_ASM212944v1	-	M0002521-4
Escherichia coli 6-537-08_S1_C1	1444063	PRJNA233720	233720	Proteobacteria	Gammaproteobacteria	5.28622	50.8	-	JORI01	153	5643	5098	6/27/14	2/23/17	Contig	IGS	SAMN02687541	GCA_000713105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/105/GCA_000713105.1_ASM71310v1	-	6-537-08_S1_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08088	39.6	-	FYRM01	65	2300	2061	6/25/17	7/5/17	Contig	SC	SAMEA1026391	GCA_900191835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/835/GCA_900191835.1_6512_5_13	-	UoS4044
Klebsiella pneumoniae subsp. pneumoniae ATCC 43816	1308539	PRJNA193654	193654	Proteobacteria	Gammaproteobacteria	4.18419	59.5	-	APWN01	1550	-	-	4/17/14	9/17/14	Contig	University of Louisville	SAMN01992012	GCA_000633025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/633/025/GCA_000633025.1_ATCC43816_1.0	25203254	ATCC 43816
Klebsiella pneumoniae	573	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	9.30854	49.7	-	JUOV01	1012	-	-	7/10/15	7/13/16	Contig	University of Washington	SAMN03198105	GCA_001068065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/065/GCA_001068065.1_ASM106806v1	26230489	898_KPNE
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06954	39.7	-	FYRN01	63	2235	2006	6/25/17	7/5/17	Contig	SC	SAMEA1026471	GCA_900191845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/845/GCA_900191845.1_6512_5_16	-	UoS4071
Escherichia coli 6-319-05_S4_C3	1444282	PRJNA233939	233939	Proteobacteria	Gammaproteobacteria	5.20825	50.7	-	JORJ01	433	5607	4956	6/27/14	2/23/17	Contig	IGS	SAMN02687481	GCA_000713115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/115/GCA_000713115.1_ASM71311v1	-	6-319-05_S4_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39873	65.6	-	MRGS01	3	4264	4112	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094155	GCA_002129465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/465/GCA_002129465.1_ASM212946v1	-	M0002998-4
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.83828	52.1	-	LIMB01	27	4992	4734	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079683	GCA_001713905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/905/GCA_001713905.1_ASM171390v1	-	CFSAN024738
Staphylococcus aureus 122	1413491	PRJNA226445	226445	Terrabacteria group	Firmicutes	2.70922	32.8	-	JJDE01	26	2802	2626	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391318	GCA_000636895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/895/GCA_000636895.1_Stap_aure_122_V1	-	122
Staphylococcus aureus 12464	1413416	PRJNA226369	226369	Terrabacteria group	Firmicutes	2.81175	32.9	-	JJDD01	41	2911	2722	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391243	GCA_000636915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/915/GCA_000636915.1_Stap_aure_12464_V1	-	12464
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.75738	52.1	-	LIMA01	28	4884	4635	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079684	GCA_001713915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/915/GCA_001713915.1_ASM171391v1	-	CFSAN024739
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40938	65.6	-	MRGV01	5	4285	4113	5/11/17	5/22/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094158	GCA_002129505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/505/GCA_002129505.1_ASM212950v1	-	M0005620-1
Escherichia coli 6-175-07_S1_C3	1444114	PRJNA233771	233771	Proteobacteria	Gammaproteobacteria	5.36227	50.6	-	JORL01	127	5603	5153	6/27/14	2/23/17	Contig	IGS	SAMN02687526	GCA_000713135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/135/GCA_000713135.1_ASM71313v1	-	6-175-07_S1_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09973	39.7	-	FYRP01	61	2308	2074	6/25/17	7/5/17	Contig	SC	SAMEA1026411	GCA_900191855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/855/GCA_900191855.1_6512_5_15	-	UoS4054
Klebsiella pneumoniae subsp. pneumoniae JCM 20051	1300166	PRJDB902	243779	Proteobacteria	Gammaproteobacteria	5.34674	55.8	-	BBEV01	163	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00016831	GCA_001312905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/905/GCA_001312905.1_ASM131290v1	-	JCM 20051
Klebsiella pneumoniae	573	PRJNA278620	278620	Proteobacteria	Gammaproteobacteria	5.80561	56.9	-	LFNW01	1147	5950	3909	12/21/15	12/21/15	Contig	University of Pittsburgh	SAMN03421000	GCA_001471065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/065/GCA_001471065.1_ASM147106v1	26637170	KLP25
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.11177	39.6	-	FYRR01	53	2342	2101	6/25/17	7/5/17	Contig	SC	SAMEA1026496	GCA_900191895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/895/GCA_900191895.1_6512_5_19	-	UoS4077
Escherichia coli 6-175-07_S4_C3	1444281	PRJNA233938	233938	Proteobacteria	Gammaproteobacteria	4.81193	50.8	-	JORK01	133	5053	4599	6/27/14	2/23/17	Contig	IGS	SAMN02680186	GCA_000713175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/175/GCA_000713175.1_ASM71317v1	-	6-175-07_S4_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39597	65.6	-	MRGY01	11	4280	4109	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094161	GCA_002129525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/525/GCA_002129525.1_ASM212952v1	-	M0007352-9
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74146	52	-	LILZ01	46	4873	4617	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079685	GCA_001713945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/945/GCA_001713945.1_ASM171394v1	-	CFSAN024740
Staphylococcus aureus 12S00040	1413364	PRJNA226317	226317	Terrabacteria group	Firmicutes	2.72004	32.7	-	JJDC01	44	2796	2648	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391191	GCA_000636935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/935/GCA_000636935.1_Stap_aure_12S00040_V1	-	12S00040
Staphylococcus aureus 12S00579	1413365	PRJNA226318	226318	Terrabacteria group	Firmicutes	2.79861	32.9	-	JJDB01	50	2915	2721	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391192	GCA_000636955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/955/GCA_000636955.1_Stap_aure_12S00579_V1	-	12S00579
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74013	52	-	LILY01	32	4872	4615	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079686	GCA_001713955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/955/GCA_001713955.1_ASM171395v1	-	CFSAN024741
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39991	65.6	-	MRGZ01	3	4274	4107	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094162	GCA_002129545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/545/GCA_002129545.1_ASM212954v1	-	M0010456-3
Escherichia coli 6-319-05_S3_C3	1444198	PRJNA233855	233855	Proteobacteria	Gammaproteobacteria	5.28577	50.6	-	JORM01	103	5634	5160	6/27/14	2/23/17	Contig	IGS	SAMN02680227	GCA_000713185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/185/GCA_000713185.1_ASM71318v1	-	6-319-05_S3_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10166	39.4	-	FYRS01	59	2280	2067	6/25/17	7/5/17	Contig	SC	SAMEA1026530	GCA_900191905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/905/GCA_900191905.1_6512_5_21	-	UoS4082
Klebsiella pneumoniae	573	PRJNA278620	278620	Proteobacteria	Gammaproteobacteria	5.63168	57	-	LFNY01	827	5799	3932	12/21/15	12/21/15	Contig	University of Pittsburgh	SAMN03421002	GCA_001471075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/075/GCA_001471075.1_ASM147107v1	26637170	KLP27
Klebsiella pneumoniae	573	PRJNA278620	278620	Proteobacteria	Gammaproteobacteria	5.94338	56.7446	plasmid pKp41:CP012000.1	LFOA01	1186	6275	4168	12/21/15	12/21/15	Contig	University of Pittsburgh	SAMN03421004	GCA_001471085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/085/GCA_001471085.2_ASM147108v2	26637170	KLP41
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.02773	39.6	-	FYRU01	47	2228	2017	6/25/17	7/5/17	Contig	SC	SAMEA1026808	GCA_900191925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/925/GCA_900191925.1_6512_6_1	-	UoS4084
Escherichia coli 7-233-03_S1_C2	1444075	PRJNA233732	233732	Proteobacteria	Gammaproteobacteria	4.76349	50.9	-	JORN01	84	4909	4533	6/27/14	2/23/17	Contig	IGS	SAMN02680093	GCA_000713195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/195/GCA_000713195.1_ASM71319v1	-	7-233-03_S1_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39479	65.6	-	MRHD01	3	4271	4107	5/11/17	5/22/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094166	GCA_002129565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/565/GCA_002129565.1_ASM212956v1	-	M0006789-3
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70305	52.1	-	LILX01	30	4812	4562	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079687	GCA_001713985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/985/GCA_001713985.1_ASM171398v1	-	CFSAN024742
Staphylococcus aureus 12S00881	1413366	PRJNA226319	226319	Terrabacteria group	Firmicutes	2.80272	32.8	-	JJDA01	25	2930	2748	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391193	GCA_000636975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/975/GCA_000636975.1_Stap_aure_12S00881_V1	-	12S00881
Staphylococcus aureus 12S01153	1413368	PRJNA226321	226321	Terrabacteria group	Firmicutes	2.86277	32.8	-	JJCY01	42	3000	2805	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391195	GCA_000636995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/636/995/GCA_000636995.1_Stap_aure_12S01153_V1	-	12S01153
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.75269	52.1	-	LILU01	38	4891	4634	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079673	GCA_001713995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/995/GCA_001713995.1_ASM171399v1	-	CFSAN024728
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.4047	65.6	-	MRHF01	5	4266	4097	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094168	GCA_002129585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/585/GCA_002129585.1_ASM212958v1	-	M0014239-9
Escherichia coli 7-233-03_S3_C1	1444130	PRJNA233787	233787	Proteobacteria	Gammaproteobacteria	5.26461	50.7	-	JORO01	140	5702	5177	6/27/14	2/23/17	Contig	IGS	SAMN02687468	GCA_000713235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/235/GCA_000713235.1_ASM71323v1	-	7-233-03_S3_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07432	39.7	-	FYSB01	77	2271	1998	6/25/17	7/5/17	Contig	SC	SAMEA1026329	GCA_900191935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/935/GCA_900191935.1_6512_6_4	-	UoS4096
Klebsiella pneumoniae	573	PRJNA278620	278620	Proteobacteria	Gammaproteobacteria	5.70451	56.9	-	LFNV01	944	5838	3977	12/21/15	12/21/15	Contig	University of Pittsburgh	SAMN03420999	GCA_001471095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/095/GCA_001471095.1_KLP-24	26637170	KLP24
Klebsiella pneumoniae	573	PRJNA278620	278620	Proteobacteria	Gammaproteobacteria	5.79205	56.8	-	LFNX01	1211	6037	4121	12/21/15	12/21/15	Contig	University of Pittsburgh	SAMN03421001	GCA_001471145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/145/GCA_001471145.1_ASM147114v1	26637170	KLP26
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07688	39.6	-	FYRY01	61	2269	2053	6/25/17	7/5/17	Contig	SC	SAMEA1026360	GCA_900191945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/945/GCA_900191945.1_6512_6_3	-	UoS4091
Escherichia coli 6-537-08_S4_C1	1444227	PRJNA233884	233884	Proteobacteria	Gammaproteobacteria	4.806	50.8	-	JORS01	129	5059	4557	6/27/14	2/23/17	Contig	IGS	SAMN02687507	GCA_000713255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/255/GCA_000713255.1_ASM71325v1	-	6-537-08_S4_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.42136	65.6	-	MRHI01	8	4308	4134	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094171	GCA_002129605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/605/GCA_002129605.1_ASM212960v1	-	M0009212-3
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.7095	52.1	-	LILT01	31	4829	4572	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079674	GCA_001714015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/015/GCA_001714015.1_ASM171401v1	-	CFSAN024729
Staphylococcus aureus 12S01399	1413369	PRJNA226322	226322	Terrabacteria group	Firmicutes	2.78549	32.9	-	JJCX01	36	2920	2721	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391196	GCA_000637015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/015/GCA_000637015.1_Stap_aure_12S01399_V1	-	12S01399
Staphylococcus aureus 12-ST01564	1413370	PRJNA226323	226323	Terrabacteria group	Firmicutes	2.74754	32.7	-	JJCW01	53	2835	2671	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391197	GCA_000637035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/035/GCA_000637035.1_Stap_aure_12-ST01564_V1	-	12-ST01564
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.83003	52.1	-	LILO01	45	4992	4722	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079679	GCA_001714025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/025/GCA_001714025.1_ASM171402v1	-	CFSAN024734
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39389	65.6	-	MRHJ01	3	4271	4108	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094172	GCA_002129625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/625/GCA_002129625.1_ASM212962v1	-	M0012491-8
Escherichia coli 6-537-08_S3_C1	1444146	PRJNA233803	233803	Proteobacteria	Gammaproteobacteria	5.16828	50.6	-	JORP01	97	5420	5074	6/27/14	2/23/17	Contig	IGS	SAMN02680229	GCA_000713265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/265/GCA_000713265.1_ASM71326v1	-	6-537-08_S3_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06549	39.5	-	FYSJ01	67	2267	2016	6/25/17	7/5/17	Contig	SC	SAMEA1026317	GCA_900191965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/965/GCA_900191965.1_6512_6_5	-	UoS4099
Klebsiella pneumoniae	573	PRJNA278620	278620	Proteobacteria	Gammaproteobacteria	5.93426	56.7592	plasmid pKp28:CP011999.1	LFNZ01	1221	6215	4005	12/21/15	12/21/15	Contig	University of Pittsburgh	SAMN03421003	GCA_001471155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/155/GCA_001471155.2_ASM147115v2	26637170	KLP28
Klebsiella pneumoniae	573	PRJNA278620	278620	Proteobacteria	Gammaproteobacteria	6.03403	56.7	-	LFNU01	1386	6327	4121	12/21/15	12/21/15	Contig	University of Pittsburgh	SAMN03420998	GCA_001471175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/175/GCA_001471175.1_ASM147117v1	26637170	KLP16
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09197	39.6	-	FYRW01	55	2330	2077	6/25/17	7/5/17	Contig	SC	SAMEA1026428	GCA_900191975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/975/GCA_900191975.1_6512_6_6	-	UoS4100
Escherichia coli 2-222-05_S4_C1	1444206	PRJNA233863	233863	Proteobacteria	Gammaproteobacteria	4.86208	50.9	-	JORR01	161	5156	4633	6/27/14	2/23/17	Contig	IGS	SAMN02680250	GCA_000713275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/275/GCA_000713275.1_ASM71327v1	-	2-222-05_S4_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40614	65.6	-	MRHN01	8	4286	4113	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094176	GCA_002129635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/635/GCA_002129635.1_ASM212963v1	-	M0015931-0
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.82908	52.1	-	LIMC01	38	4985	4723	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079682	GCA_001714065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/065/GCA_001714065.1_ASM171406v1	-	CFSAN024737
Staphylococcus aureus 12-ST01988	1413371	PRJNA226324	226324	Terrabacteria group	Firmicutes	2.86711	32.8	-	JJCV01	45	3015	2817	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391198	GCA_000637055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/055/GCA_000637055.1_Stap_aure_12-ST01988_V1	-	12-ST01988
Staphylococcus aureus 13-ST00049	1413372	PRJNA226325	226325	Terrabacteria group	Firmicutes	2.78738	32.7	-	JJCU01	54	2905	2739	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391199	GCA_000637075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/075/GCA_000637075.1_Stap_aure_13-ST00049_V1	-	13-ST00049
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.742	52	-	LILW01	29	4876	4619	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079688	GCA_001714075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/075/GCA_001714075.1_ASM171407v1	-	CFSAN024743
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39123	65.6	-	MRHQ01	10	4265	4105	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094179	GCA_002129665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/665/GCA_002129665.1_ASM212966v1	-	M0016355-1
Escherichia coli 6-537-08_S3_C3	1444199	PRJNA233856	233856	Proteobacteria	Gammaproteobacteria	5.20733	50.6	-	JORQ01	99	5454	5082	6/27/14	2/23/17	Contig	IGS	SAMN02680261	GCA_000713315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/315/GCA_000713315.1_ASM71331v1	-	6-537-08_S3_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10245	39.6	-	FYSE01	74	2328	2089	6/25/17	7/5/17	Contig	SC	SAMEA1026421	GCA_900191985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/985/GCA_900191985.1_6512_6_8	-	UoS4106
Klebsiella pneumoniae	573	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.59387	57.2	-	LORW01	3	5657	4941	12/21/15	12/21/15	Contig	US Food and Drug Administration 	SAMN03996268	GCA_001471625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/625/GCA_001471625.1_ASM147162v1	-	FDAARGOS_127
Klebsiella pneumoniae	573	PRJNA285125	285125	Proteobacteria	Gammaproteobacteria	5.90846	57	-	LDWV01	188	6022	5266	2/4/16	2/4/16	Contig	Yonsei university college of medicine	SAMN03738195	GCA_001548535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/548/535/GCA_001548535.1_ASM154853v1	-	YMC 2013/7/B3993
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.04431	39.6	-	FYSK01	65	2228	2004	6/25/17	7/5/17	Contig	SC	SAMEA1026413	GCA_900191995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/995/GCA_900191995.1_6512_6_7	-	UoS4104
Escherichia coli 6-319-05_S1_C1	1444062	PRJNA233719	233719	Proteobacteria	Gammaproteobacteria	5.22808	50.8	-	JORT01	221	5704	5162	6/27/14	2/23/17	Contig	IGS	SAMN02680153	GCA_000713335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/335/GCA_000713335.1_ASM71333v1	-	6-319-05_S1_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39598	65.6	-	MRHS01	9	4280	4107	5/11/17	5/22/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094181	GCA_002129685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/685/GCA_002129685.1_ASM212968v1	-	M0016918-6
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74258	52	-	LIOP01	31	4876	4619	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079689	GCA_001714095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/095/GCA_001714095.1_ASM171409v1	-	CFSAN024744
Staphylococcus aureus 14(11MN_17-08-66-05)	1413562	PRJNA226517	226517	Terrabacteria group	Firmicutes	2.75739	32.8	-	JJCT01	36	2836	2650	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391389	GCA_000637095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/095/GCA_000637095.1_Stap_aure_1411MN_17-08-66-05_V1	-	14(11MN_17-08-66-05)
Staphylococcus aureus 150211/pool 1	1413401	PRJNA226354	226354	Terrabacteria group	Firmicutes	2.7493	32.9	-	JJCR01	44	2831	2629	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391228	GCA_000637115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/115/GCA_000637115.1_Stap_aure_150211_pool_1_V1	-	150211/pool 1
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74232	52	-	LIOQ01	28	4873	4618	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079690	GCA_001714125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/125/GCA_001714125.1_ASM171412v1	-	CFSAN024745
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40417	65.6	-	MRHU01	10	4283	4108	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094183	GCA_002129725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/725/GCA_002129725.1_ASM212972v1	-	M0017610-8
Escherichia coli 7-233-03_S1_C3	1444103	PRJNA233760	233760	Proteobacteria	Gammaproteobacteria	4.74392	50.8	-	JORU01	72	4914	4543	6/27/14	2/23/17	Contig	IGS	SAMN02687543	GCA_000713345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/345/GCA_000713345.1_ASM71334v1	-	7-233-03_S1_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.0213	39.7	-	FYSH01	44	2224	1997	6/25/17	7/5/17	Contig	SC	SAMEA1026404	GCA_900192005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/005/GCA_900192005.1_6512_6_9	-	UoS4109
Klebsiella pneumoniae	573	PRJNA323393	323393	Proteobacteria	Gammaproteobacteria	5.78912	57	-	LYPR01	148	5875	4925	12/13/16	12/13/16	Contig	Yonsei university college of medicine	SAMN05178487	GCA_001901725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/725/GCA_001901725.1_ASM190172v1	-	YMC2011/7/B36
Klebsiella pneumoniae	573	PRJNA323393	323393	Proteobacteria	Gammaproteobacteria	5.84837	56.5	-	LYPV01	132	5808	5033	12/13/16	12/13/16	Contig	Yonsei university college of medicine	SAMN05178492	GCA_001901745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/745/GCA_001901745.1_ASM190174v1	-	YMC2010/8/B2027
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.99931	39.8	-	FYSL01	48	2232	1996	6/25/17	7/5/17	Contig	SC	SAMEA1026690	GCA_900192015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/015/GCA_900192015.1_6512_6_11	-	UoS4133
Escherichia coli 7-233-03_S3_C3	1444188	PRJNA233845	233845	Proteobacteria	Gammaproteobacteria	4.96229	50.7	-	JORV01	172	5308	4802	6/27/14	2/23/17	Contig	IGS	SAMN02687488	GCA_000713355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/355/GCA_000713355.1_ASM71335v1	-	7-233-03_S3_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40044	65.6	-	MRHX01	9	4280	4105	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094186	GCA_002129745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/745/GCA_002129745.1_ASM212974v1	-	M0019715-3
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74258	52	-	LIOR01	31	4876	4619	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079691	GCA_001714145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/145/GCA_001714145.1_ASM171414v1	-	CFSAN024746
Staphylococcus aureus 16(11S1S4-09)	1413558	PRJNA226513	226513	Terrabacteria group	Firmicutes	2.79927	32.9	-	JJCQ01	39	2889	2705	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391385	GCA_000637135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/135/GCA_000637135.1_Stap_aure_1611S1S4-09_V1	-	16(11S1S4-09)
Staphylococcus aureus 18439-17	1413402	PRJNA226355	226355	Terrabacteria group	Firmicutes	2.75975	32.8	-	JJCP01	29	2833	2658	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391229	GCA_000637155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/155/GCA_000637155.1_Stap_aure_18439-17_V1	-	18439-17
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.83819	52.1	-	LIOS01	33	4999	4731	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079692	GCA_001714165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/165/GCA_001714165.1_ASM171416v1	-	CFSAN024747
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40673	65.6	-	MRHY01	9	4283	4109	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094187	GCA_002129755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/755/GCA_002129755.1_ASM212975v1	-	M0022059-1
Escherichia coli 7-233-03_S4_C2	1444241	PRJNA233898	233898	Proteobacteria	Gammaproteobacteria	4.83751	50.6	-	JORW01	83	5043	4610	6/27/14	2/23/17	Contig	IGS	SAMN02680246	GCA_000713395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/395/GCA_000713395.1_ASM71339v1	-	7-233-03_S4_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09105	39.5	-	FYSC01	60	2298	2064	6/25/17	7/5/17	Contig	SC	SAMEA1026701	GCA_900192025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/025/GCA_900192025.1_6512_6_12	-	UoS4134
Klebsiella pneumoniae	573	PRJNA323393	323393	Proteobacteria	Gammaproteobacteria	5.87999	56.7	-	LYPW01	233	5902	5070	12/13/16	12/13/16	Contig	Yonsei university college of medicine	SAMN05178493	GCA_001901805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/805/GCA_001901805.1_ASM190180v1	-	YMC2012/8/C631
Klebsiella pneumoniae	573	PRJNA323393	323393	Proteobacteria	Gammaproteobacteria	5.45907	57.3	-	LYPS01	90	5395	4695	12/13/16	12/13/16	Contig	Yonsei university college of medicine	SAMN05178488	GCA_001901825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/825/GCA_001901825.1_ASM190182v1	-	YMC2011/7/B774
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06279	39.5	-	FYSF01	64	2238	2010	6/25/17	7/5/17	Contig	SC	SAMEA1026573	GCA_900192055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/055/GCA_900192055.1_6512_6_15	-	UoS4150
Escherichia coli 6-537-08_S3_C2	1444174	PRJNA233831	233831	Proteobacteria	Gammaproteobacteria	5.1607	50.6	-	JORX01	98	5432	5054	6/27/14	2/23/17	Contig	IGS	SAMN02680158	GCA_000713415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/415/GCA_000713415.1_ASM71341v1	-	6-537-08_S3_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40575	65.6	-	MRHZ01	5	4280	4110	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094188	GCA_002129785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/785/GCA_002129785.1_ASM212978v1	-	M0022618-4
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.83157	52.1	-	LIOY01	48	5001	4722	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079694	GCA_001714175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/175/GCA_001714175.1_ASM171417v1	-	CFSAN024749
Staphylococcus aureus 18439-62	1413405	PRJNA226358	226358	Terrabacteria group	Firmicutes	2.79097	32.9	-	JJCO01	35	2881	2698	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391232	GCA_000637175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/175/GCA_000637175.1_Stap_aure_18439-62_V1	-	18439-62
Staphylococcus aureus 18754-2	1413387	PRJNA226340	226340	Terrabacteria group	Firmicutes	2.85597	32.7	-	JJCN01	58	2979	2809	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391214	GCA_000637195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/195/GCA_000637195.1_Stap_aure_18754-2_V1	-	18754-2
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.79233	52.1	-	LIOZ01	29	4946	4687	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079693	GCA_001714185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/185/GCA_001714185.1_ASM171418v1	-	CFSAN024748
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40574	65.6	-	MRIB01	4	4282	4111	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094190	GCA_002129805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/805/GCA_002129805.1_ASM212980v1	-	M0023579-7
Escherichia coli 8-415-05_S1_C1	1444048	PRJNA233705	233705	Proteobacteria	Gammaproteobacteria	4.81915	50.5	-	JORZ01	132	5160	4643	6/27/14	2/23/17	Contig	IGS	SAMN02687533	GCA_000713425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/425/GCA_000713425.1_ASM71342v1	-	8-415-05_S1_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.97187	39.7	-	FYSA01	41	2164	1933	6/25/17	7/5/17	Contig	SC	SAMEA1026639	GCA_900192065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/065/GCA_900192065.1_6512_6_10	-	UoS4131
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.57205	57.2	-	MPXL03	117	5717	5497	12/14/16	5/2/17	Contig	JCVI	SAMN05956068	GCA_001903125.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/125/GCA_001903125.3_ASM190312v3	-	682_1613
Klebsiella pneumoniae	573	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	6.48356	56.1	-	MPYG03	261	6716	6454	12/14/16	5/2/17	Contig	JCVI	SAMN05956089	GCA_001903625.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/903/625/GCA_001903625.3_ASM190362v3	-	1163_2046
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.04928	39.7	-	FYRZ01	47	2272	2056	6/25/17	7/5/17	Contig	SC	SAMEA1026607	GCA_900192075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/075/GCA_900192075.1_6512_6_17	-	UoS4155
Escherichia coli 7-233-03_S3_C2	1444158	PRJNA233815	233815	Proteobacteria	Gammaproteobacteria	5.2602	50.8	-	JORY01	204	5727	5130	6/27/14	2/23/17	Contig	IGS	SAMN02680151	GCA_000713435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/435/GCA_000713435.1_ASM71343v1	-	7-233-03_S3_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40352	65.6	-	MRDO01	2	4277	4109	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094068	GCA_002129825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/825/GCA_002129825.1_ASM212982v1	-	01-R1108
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.83179	52.1	-	LIPA01	40	4998	4731	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079695	GCA_001714225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/225/GCA_001714225.1_ASM171422v1	-	CFSAN024750
Staphylococcus aureus 19571	1413333	PRJNA226286	226286	Terrabacteria group	Firmicutes	2.77043	32.9	-	JJCM01	40	2903	2712	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391160	GCA_000637215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/215/GCA_000637215.1_Stap_aure_19571_V1	-	19571
Staphylococcus aureus 2(04HN_17-03-52-05)	1413561	PRJNA226516	226516	Terrabacteria group	Firmicutes	2.79862	32.8	-	JJCL01	33	2910	2714	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391388	GCA_000637235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/235/GCA_000637235.1_Stap_aure_204HN_17-03-52-05_V1	-	2(04HN_17-03-52-05)
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.83155	52.1	-	LIOW01	29	4988	4720	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079697	GCA_001714245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/245/GCA_001714245.1_ASM171424v1	-	CFSAN024752
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39555	65.6	-	MRDP01	3	4273	4108	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094069	GCA_002129865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/865/GCA_002129865.1_ASM212986v1	-	02-R0748
Escherichia coli 8-415-05_S3_C3	1444189	PRJNA233846	233846	Proteobacteria	Gammaproteobacteria	5.30649	50.5	-	JOSA01	152	5571	5073	6/27/14	2/23/17	Contig	IGS	SAMN02680259	GCA_000713455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/455/GCA_000713455.1_ASM71345v1	-	8-415-05_S3_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03687	39.5	-	FYSR01	63	2241	2018	6/25/17	7/5/17	Contig	SC	SAMEA1026517	GCA_900192085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/085/GCA_900192085.1_6512_6_18	-	UoS4157
Klebsiella pneumoniae	573	PRJNA327106	327106	Proteobacteria	Gammaproteobacteria	5.33958	57.4	-	MKXY01	123	-	-	12/22/16	12/22/16	Contig	None	SAMN05509308	GCA_001914065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/065/GCA_001914065.1_ASM191406v1	-	-
Klebsiella pneumoniae	573	PRJNA361484	361484	Proteobacteria	Gammaproteobacteria	5.30018	57	-	MTPQ01	220	5695	4701	2/1/17	2/1/17	Contig	University of Sao Paulo	SAMN06234296	GCA_001982515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/515/GCA_001982515.1_ASM198251v1	-	ICBKpBL-I-05(3)
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06047	39.6	-	FYSP01	64	2262	2010	6/25/17	7/5/17	Contig	SC	SAMEA1026685	GCA_900192095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/095/GCA_900192095.1_6512_6_13	-	UoS4138
Escherichia coli 8-415-05_S3_C1	1444131	PRJNA233788	233788	Proteobacteria	Gammaproteobacteria	5.34037	50.5	-	JOSB01	154	5605	5092	6/27/14	2/23/17	Contig	IGS	SAMN02687469	GCA_000713495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/495/GCA_000713495.1_ASM71349v1	-	8-415-05_S3_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40732	65.6	-	MRDR01	4	4285	4125	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094071	GCA_002129885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/885/GCA_002129885.1_ASM212988v1	-	03-R0915
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.8329	52.1	-	LIOX01	35	4992	4719	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079696	GCA_001714255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/255/GCA_001714255.1_ASM171425v1	-	CFSAN024751
Staphylococcus aureus 2009-60-561-1	1413519	PRJNA226474	226474	Terrabacteria group	Firmicutes	2.82967	32.8	-	JJCK01	39	2959	2747	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391346	GCA_000637255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/255/GCA_000637255.1_Stap_aure_2009-60-561-1_V1	-	2009-60-561-1
Staphylococcus aureus 2010-60-1240-1	1413514	PRJNA226469	226469	Terrabacteria group	Firmicutes	2.93535	32.9	-	JJCJ01	55	3091	2886	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391341	GCA_000637275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/275/GCA_000637275.1_Stap_aure_2010-60-1240-1_V1	-	2010-60-1240-1
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.83164	52.1	-	LIOV01	30	4984	4723	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079698	GCA_001714265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/265/GCA_001714265.1_ASM171426v1	-	CFSAN024753
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39966	65.6	-	MRDQ01	4	4274	4103	5/11/17	5/22/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094070	GCA_002129905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/905/GCA_002129905.1_ASM212990v1	-	02-R0749
Escherichia coli 6-537-08_S1_C2	1444091	PRJNA233748	233748	Proteobacteria	Gammaproteobacteria	5.31082	50.8	-	JOSC01	160	5689	5092	6/27/14	2/23/17	Contig	IGS	SAMN02687487	GCA_000713505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/505/GCA_000713505.1_ASM71350v1	-	6-537-08_S1_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05731	39.5	-	FYSG01	75	2227	2001	6/25/17	7/5/17	Contig	SC	SAMEA1026515	GCA_900192105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/105/GCA_900192105.1_6512_6_19	-	UoS4164
Klebsiella pneumoniae	573	PRJNA358645	358645	Proteobacteria	Gammaproteobacteria	7.63643	51.5	-	MTSV01	1319	8345	7853	2/27/17	2/27/17	Contig	Fatima Jinnah Women University	SAMN06176949	GCA_002006985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/985/GCA_002006985.1_ASM200698v1	-	MB369
Klebsiella pneumoniae	573	PRJNA379106	379106	Proteobacteria	Gammaproteobacteria	5.08417	57.9	-	MZMS01	11	-	-	3/15/17	3/15/17	Contig	Institute for Infectious Diseases	SAMN06579316	GCA_002027655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/655/GCA_002027655.1_ASM202765v1	-	Kp2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.13411	39.6	-	FYSO01	72	2367	2136	6/25/17	7/5/17	Contig	SC	SAMEA1026752	GCA_900192125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/125/GCA_900192125.1_6512_6_22	-	UoS4167
Escherichia coli 7-233-03_S4_C1	1444213	PRJNA233870	233870	Proteobacteria	Gammaproteobacteria	4.67372	50.9	-	JOSD01	90	4826	4424	6/27/14	2/23/17	Contig	IGS	SAMN02687532	GCA_000713525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/525/GCA_000713525.1_ASM71352v1	-	7-233-03_S4_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40088	65.6	-	MRDW01	23	4286	4113	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094076	GCA_002129925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/925/GCA_002129925.1_ASM212992v1	-	98-20044
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.82549	52.1	-	LIOU01	26	4982	4718	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079699	GCA_001714305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/305/GCA_001714305.1_ASM171430v1	-	CFSAN024754
Staphylococcus aureus 2010-60-6063-29	1413328	PRJNA226281	226281	Terrabacteria group	Firmicutes	2.73895	32.9	-	JJCI01	27	2850	2663	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391155	GCA_000637295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/295/GCA_000637295.1_Stap_aure_2010-60-6063-29_V1	-	2010-60-6063-29
Staphylococcus aureus 2010-60-6063-39	1413516	PRJNA226471	226471	Terrabacteria group	Firmicutes	2.77958	32.8	-	JJCH01	32	2899	2709	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391343	GCA_000637315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/315/GCA_000637315.1_Stap_aure_2010-60-6063-39_V1	-	2010-60-6063-39
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.83094	52.1	-	LIOT01	40	4987	4721	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079700	GCA_001714325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/325/GCA_001714325.1_ASM171432v1	-	CFSAN024755
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3975	65.6	-	MREC01	25	4294	4105	5/11/17	5/22/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094082	GCA_002129995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/995/GCA_002129995.1_ASM212999v1	-	02-R0191
Escherichia coli 7-233-03_S4_C3	1444270	PRJNA233927	233927	Proteobacteria	Gammaproteobacteria	4.64155	50.9	-	JOSE01	115	4783	4380	6/27/14	2/23/17	Contig	IGS	SAMN02680148	GCA_000713535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/535/GCA_000713535.1_ASM71353v1	-	7-233-03_S4_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.96265	39.7	-	FYSN01	41	2144	1956	6/25/17	7/5/17	Contig	SC	SAMEA1026745	GCA_900192135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/135/GCA_900192135.1_6512_7_1	-	UoS4168
Klebsiella pneumoniae	573	PRJNA377546	377546	Proteobacteria	Gammaproteobacteria	5.58903	56.9	-	NBIT01	2121	7155	6799	4/18/17	4/18/17	Contig	University of Sao Paulo	SAMN06461945	GCA_002099265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/265/GCA_002099265.1_ASM209926v1	-	4449
Klebsiella pneumoniae	573	PRJNA359479	359479	Proteobacteria	Gammaproteobacteria	5.56056	57.1	-	MSSK01	672	-	-	5/19/17	5/19/17	Contig	S.Orsola-Malpighi University Hospital	SAMN06191601	GCA_002150545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/545/GCA_002150545.1_ASM215054v1	-	CNTD94
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.11468	39.5	-	FYSQ01	55	2295	2073	6/25/17	7/5/17	Contig	SC	SAMEA1026779	GCA_900192145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/145/GCA_900192145.1_6512_6_21	-	UoS4166
Escherichia coli 6-537-08_S1_C3	1444116	PRJNA233773	233773	Proteobacteria	Gammaproteobacteria	5.32591	50.8	-	JOSF01	167	5714	5140	6/27/14	2/23/17	Contig	IGS	SAMN02687512	GCA_000713575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/575/GCA_000713575.1_ASM71357v1	-	6-537-08_S1_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39969	65.6	-	MREE01	8	4274	4108	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094084	GCA_002130035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/035/GCA_002130035.1_ASM213003v1	-	01-R0228
Salmonella enterica subsp. enterica	59201	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.97837	52.1	-	LYZK01	65	5170	4883	8/25/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN02844332	GCA_001714545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/545/GCA_001714545.1_ASM171454v1	-	FDA00000947
Staphylococcus aureus 2010-60-6511-10	1413515	PRJNA226470	226470	Terrabacteria group	Firmicutes	2.80695	32.9	-	JJCG01	45	2932	2741	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391342	GCA_000637335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/335/GCA_000637335.1_Stap_aure_2010-60-6511-10_V1	-	2010-60-6511-10
Staphylococcus aureus 2010-60-6511-39	1413517	PRJNA226472	226472	Terrabacteria group	Firmicutes	2.8599	32.9	-	JJCF01	47	2990	2796	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391344	GCA_000637355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/355/GCA_000637355.1_Stap_aure_2010-60-6511-39_V1	-	2010-60-6511-39
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.13024	52	-	MABI01	164	5350	5049	8/26/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03941087	GCA_001714645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/714/645/GCA_001714645.1_ASM171464v1	-	CFSAN033855
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38514	65.6	-	MREF01	34	4273	4082	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094085	GCA_002130065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/065/GCA_002130065.1_ASM213006v1	-	00-R1688
Escherichia coli 8-415-05_S3_C2	1444159	PRJNA233816	233816	Proteobacteria	Gammaproteobacteria	5.29081	50.5	-	JOSI01	134	5547	5062	6/27/14	2/23/17	Contig	IGS	SAMN02687470	GCA_000713585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/585/GCA_000713585.1_ASM71358v1	-	8-415-05_S3_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.97269	39.7	-	FYSV01	25	2165	1944	6/25/17	7/5/17	Contig	SC	SAMEA1026314	GCA_900192155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/155/GCA_900192155.1_6512_7_19	-	UoS4257
Klebsiella pneumoniae	573	PRJNA359480	359480	Proteobacteria	Gammaproteobacteria	5.62577	57.1	-	MSSJ01	446	-	-	5/19/17	5/19/17	Contig	S.Orsola-Malpighi University Hospital	SAMN06191596	GCA_002150565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/565/GCA_002150565.1_ASM215056v1	-	CNTD42
Klebsiella pneumoniae	573	PRJNA359476	359476	Proteobacteria	Gammaproteobacteria	5.63102	57.1	-	MSSH01	299	-	-	5/19/17	5/19/17	Contig	S.Orsola-Malpighi University Hospital	SAMN06191599	GCA_002150625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/150/625/GCA_002150625.1_ASM215062v1	-	CNTD87
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.02621	39.7	-	FYTC01	37	2206	1988	6/25/17	7/5/17	Contig	SC	SAMEA1026691	GCA_900192165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/165/GCA_900192165.1_6512_7_4	-	UoS4184
Escherichia coli 6-537-08_S4_C2	1444257	PRJNA233914	233914	Proteobacteria	Gammaproteobacteria	4.78968	50.8	-	JOSG01	112	5044	4554	6/27/14	2/23/17	Contig	IGS	SAMN02680236	GCA_000713605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/605/GCA_000713605.1_ASM71360v1	-	6-537-08_S4_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40395	65.6	-	MREK01	2	4281	4102	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094090	GCA_002130105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/105/GCA_002130105.1_ASM213010v1	-	01-R0910
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	5.29217	51.8	-	MCOY01	335	5438	5092	8/29/16	3/1/17	Contig	USDA	SAMN05390904	GCA_001716035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/035/GCA_001716035.1_ASM171603v1	-	ARS-CC8078
Staphylococcus aureus 2010-60-6511-5	1413518	PRJNA226473	226473	Terrabacteria group	Firmicutes	2.86762	32.9	-	JJCE01	57	2980	2783	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391345	GCA_000637375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/375/GCA_000637375.1_Stap_aure_2010-60-6511-5_V1	-	2010-60-6511-5
Staphylococcus aureus 2010-60-7626-19	1413329	PRJNA226282	226282	Terrabacteria group	Firmicutes	2.75086	32.9	-	JJCD01	30	2862	2675	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391156	GCA_000637395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/395/GCA_000637395.1_Stap_aure_2010-60-7626-19_V1	-	2010-60-7626-19
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.81348	52.1	-	MCOT01	48	4867	4625	8/29/16	3/1/17	Contig	USDA	SAMN05390910	GCA_001716045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/045/GCA_001716045.1_ASM171604v1	-	ARS-CC353
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37661	65.6	-	MREL01	31	4260	4087	5/11/17	5/22/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094091	GCA_002130135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/135/GCA_002130135.1_ASM213013v1	-	01-R0630
Escherichia coli 1-392-07_S4_C3	1444275	PRJNA233932	233932	Proteobacteria	Gammaproteobacteria	5.80623	50.6	-	JOSH01	267	6370	5762	6/27/14	2/23/17	Contig	IGS	SAMN02689031	GCA_000713615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/615/GCA_000713615.1_ASM71361v1	-	1-392-07_S4_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10122	39.5	-	FYSX01	53	2296	2100	6/25/17	7/5/17	Contig	SC	SAMEA1026773	GCA_900192175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/175/GCA_900192175.1_6512_7_14	-	UoS4237
Klebsiella pneumoniae	573	PRJNA350745	350745	Proteobacteria	Gammaproteobacteria	5.38097	57.2	-	MOSK01	2124	6014	4763	6/6/17	6/6/17	Contig	Beijing Institute of Genomics	SAMN05945902	GCA_002173895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/895/GCA_002173895.1_ASM217389v1	-	495
Klebsiella pneumoniae	573	PRJNA350754	350754	Proteobacteria	Gammaproteobacteria	5.56604	57.3	-	MOSP01	2385	5843	4877	6/6/17	6/6/17	Contig	Beijing Institute of Genomics	SAMN05945921	GCA_002173985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/985/GCA_002173985.1_ASM217398v1	-	1832
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.01952	39.7	-	FYSS01	46	2225	2011	6/25/17	7/5/17	Contig	SC	SAMEA1026707	GCA_900192185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/185/GCA_900192185.1_6512_7_3	-	UoS4180
Escherichia coli 2-052-05_S3_C2	1444149	PRJNA233806	233806	Proteobacteria	Gammaproteobacteria	5.01861	50.6	-	JOSJ01	100	5206	4779	6/27/14	2/23/17	Contig	IGS	SAMN02689032	GCA_000713655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/655/GCA_000713655.1_ASM71365v1	-	2-052-05_S3_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3926	65.6	-	MREP01	12	4279	4098	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094095	GCA_002130155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/155/GCA_002130155.1_ASM213015v1	-	01-R1148
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.82944	52.1	-	MCPM01	69	4868	4635	8/29/16	3/1/17	Contig	USDA	SAMN05390891	GCA_001716055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/055/GCA_001716055.1_ASM171605v1	-	ARS-CC6183
Staphylococcus aureus 2011-60-1490-31	1413524	PRJNA226479	226479	Terrabacteria group	Firmicutes	2.8612	32.9	-	JJCC01	69	2957	2752	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391351	GCA_000637415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/415/GCA_000637415.1_Stap_aure_2011-60-1490-31_V1	-	2011-60-1490-31
Staphylococcus aureus 2011-60-2078-5	1413523	PRJNA226478	226478	Terrabacteria group	Firmicutes	2.79285	32.9	-	JJCB01	49	2933	2733	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391350	GCA_000637435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/435/GCA_000637435.1_Stap_aure_2011-60-2078-5_V1	-	2011-60-2078-5
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.81238	52.1	-	MCOS01	66	4860	4621	8/29/16	3/1/17	Contig	USDA	SAMN05390881	GCA_001716065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/065/GCA_001716065.1_ASM171606v1	-	ARS-CC97
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3494	65.6	-	MRET01	21	4242	4074	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094099	GCA_002130195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/195/GCA_002130195.1_ASM213019v1	-	01-R0444
Escherichia coli 1-392-07_S4_C1	1444219	PRJNA233876	233876	Proteobacteria	Gammaproteobacteria	5.80531	50.6	-	JOSK01	412	6498	5857	6/27/14	2/23/17	Contig	IGS	SAMN02689030	GCA_000713675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/675/GCA_000713675.1_ASM71367v1	-	1-392-07_S4_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.0409	39.6	-	FYSW01	52	2210	1991	6/25/17	7/5/17	Contig	SC	SAMEA1026359	GCA_900192195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/195/GCA_900192195.1_6512_7_21	-	UoS4269
Klebsiella pneumoniae	573	PRJNA377546	377546	Proteobacteria	Gammaproteobacteria	5.50317	56.6	-	NBSD01	2587	7306	6958	6/14/17	6/14/17	Contig	University of Sao Paulo	SAMN06461948	GCA_002192955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/955/GCA_002192955.1_ASM219295v1	-	4451
Klebsiella pneumoniae	573	PRJNA377546	377546	Proteobacteria	Gammaproteobacteria	5.81843	56.6	-	NBSB01	2391	7432	7097	6/14/17	6/14/17	Contig	University of Sao Paulo	SAMN06461949	GCA_002192965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/192/965/GCA_002192965.1_ASM219296v1	-	1830
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.0368	39.6	-	FYSU01	50	2246	2019	6/25/17	7/5/17	Contig	SC	SAMEA1026634	GCA_900192205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/205/GCA_900192205.1_6512_7_7	-	UoS4201
Escherichia coli 2-474-04_S4_C1	1444210	PRJNA233867	233867	Proteobacteria	Gammaproteobacteria	5.03927	50.8	-	JOSL01	94	5273	4879	6/27/14	2/23/17	Contig	IGS	SAMN02680132	GCA_000713685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/685/GCA_000713685.1_ASM71368v1	-	2-474-04_S4_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38799	65.6	-	MREU01	6	4280	4113	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094100	GCA_002130215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/215/GCA_002130215.1_ASM213021v1	-	99-27860
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.74171	52.1	-	MCOU01	119	4753	4509	8/29/16	3/1/17	Contig	USDA	SAMN05390882	GCA_001716115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/115/GCA_001716115.1_ASM171611v1	-	ARS-CC444
Staphylococcus aureus 2011-60-2256-5	1413330	PRJNA226283	226283	Terrabacteria group	Firmicutes	2.7828	32.9	-	JJCA01	36	2909	2722	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391157	GCA_000637455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/455/GCA_000637455.1_Stap_aure_2011-60-2256-5_V1	-	2011-60-2256-5
Staphylococcus aureus 2011-60-2275-1	1413521	PRJNA226476	226476	Terrabacteria group	Firmicutes	2.87803	32.8	-	JJBZ01	52	3004	2815	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391348	GCA_000637475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/475/GCA_000637475.1_Stap_aure_2011-60-2275-1_V1	-	2011-60-2275-1
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.82094	52.1	-	MCOX01	66	4861	4627	8/29/16	3/1/17	Contig	USDA	SAMN05390889	GCA_001716135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/135/GCA_001716135.1_ASM171613v1	-	ARS-CC496
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35372	65.6	-	MREW01	13	4257	4087	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094102	GCA_002130245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/245/GCA_002130245.1_ASM213024v1	-	02-R0397
Escherichia coli 2-222-05_S3_C1	1444123	PRJNA233780	233780	Proteobacteria	Gammaproteobacteria	5.47927	50.7	-	JOSM01	268	5937	5275	6/27/14	2/23/17	Contig	IGS	SAMN02689034	GCA_000713695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/695/GCA_000713695.1_ASM71369v1	-	2-222-05_S3_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05568	39.6	-	FYTB01	58	2272	2035	6/25/17	7/5/17	Contig	SC	SAMEA1026336	GCA_900192215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/215/GCA_900192215.1_6512_7_10	-	UoS4214
Klebsiella pneumoniae	573	PRJNA350367	350367	Proteobacteria	Gammaproteobacteria	5.20848	57.3	-	MOMF01	2806	5745	4287	6/23/17	6/23/17	Contig	Beijing Institute of Genomics	SAMN05938603	GCA_002206005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/005/GCA_002206005.1_ASM220600v1	-	1428
Klebsiella pneumoniae	573	PRJEB10561	299783	Proteobacteria	Gammaproteobacteria	8.61077	60.5	-	FBST01	1526	-	-	1/4/16	1/4/16	Scaffold	UMCG Groningen	SAMEA3515303	GCA_001511615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/511/615/GCA_001511615.1_ERS822452	-	-
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08179	39.5	-	FYTG01	89	2255	2032	6/25/17	7/5/17	Contig	SC	SAMEA1026788	GCA_900192225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/225/GCA_900192225.1_6512_7_17	-	UoS4246
Escherichia coli 2-222-05_S3_C2	1444153	PRJNA233810	233810	Proteobacteria	Gammaproteobacteria	5.38743	50.8	-	JOSN01	234	5810	5193	6/27/14	2/23/17	Contig	IGS	SAMN02689035	GCA_000713735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/735/GCA_000713735.1_ASM71373v1	-	2-222-05_S3_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38652	65.6	-	MREY01	9	4255	4085	5/11/17	5/24/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094104	GCA_002130265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/265/GCA_002130265.1_ASM213026v1	-	01-R1591
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.72553	52.1	-	MCOV01	58	4742	4511	8/29/16	3/1/17	Contig	USDA	SAMN05390883	GCA_001716145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/145/GCA_001716145.1_ASM171614v1	-	ARS-CC457
Staphylococcus aureus 22825	1413334	PRJNA226287	226287	Terrabacteria group	Firmicutes	2.74146	32.9	-	JJBW01	35	2848	2654	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391161	GCA_000637495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/495/GCA_000637495.1_Stap_aure_22825_V1	-	22825
Staphylococcus aureus 22835	1413336	PRJNA226289	226289	Terrabacteria group	Firmicutes	2.74714	32.9	-	JJBV01	33	2846	2662	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391163	GCA_000637515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/515/GCA_000637515.1_Stap_aure_22835_V1	-	22835
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.83242	52.1	-	MCOW01	118	4871	4629	8/29/16	3/1/17	Contig	USDA	SAMN05390911	GCA_001716155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/155/GCA_001716155.1_ASM171615v1	-	ARS-CC469
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3886	65.6	-	MRFA01	16	4271	4074	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094106	GCA_002130275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/275/GCA_002130275.1_ASM213027v1	-	02-R0963
Escherichia coli 2-177-06_S3_C3	1444179	PRJNA233836	233836	Proteobacteria	Gammaproteobacteria	5.30155	50.6	-	JOSO01	167	5610	5049	6/27/14	2/23/17	Contig	IGS	SAMN02689033	GCA_000713745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/745/GCA_000713745.1_ASM71374v1	-	2-177-06_S3_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.11031	39.6	-	FYTE01	55	2308	2058	6/25/17	7/5/17	Contig	SC	SAMEA1026670	GCA_900192235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/235/GCA_900192235.1_6512_7_5	-	UoS4187
Klebsiella pneumoniae	573	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.86365	57.9	-	DCZX01	65	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06454681	GCA_002332855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/332/855/GCA_002332855.1_ASM233285v1	28894102	-
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.11666	39.5	-	FYST01	51	2312	2097	6/25/17	7/5/17	Contig	SC	SAMEA1026657	GCA_900192245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/245/GCA_900192245.1_6512_7_6	-	UoS4191
Escherichia coli 8-415-05_S1_C2	1444076	PRJNA233733	233733	Proteobacteria	Gammaproteobacteria	4.91494	50.5	-	JOSQ01	155	5308	4735	6/27/14	2/23/17	Contig	IGS	SAMN02687500	GCA_000713775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/775/GCA_000713775.1_ASM71377v1	-	8-415-05_S1_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35869	65.6	-	MRFE01	23	4254	4076	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094110	GCA_002130315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/315/GCA_002130315.1_ASM213031v1	-	02-R1444
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.72365	52.1	-	MCOZ01	64	4747	4512	8/29/16	3/1/17	Contig	USDA	SAMN05390884	GCA_001716195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/195/GCA_001716195.1_ASM171619v1	-	ARS-CC515
Staphylococcus aureus 22837	1413337	PRJNA226290	226290	Terrabacteria group	Firmicutes	2.74296	32.9	-	JJBU01	37	2849	2655	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391164	GCA_000637535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/535/GCA_000637535.1_Stap_aure_22837_V1	-	22837
Staphylococcus aureus 22838	1413338	PRJNA226291	226291	Terrabacteria group	Firmicutes	2.74484	32.9	-	JJBT01	33	2848	2663	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391165	GCA_000637555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/555/GCA_000637555.1_Stap_aure_22838_V1	-	22838
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.72248	52.1	-	MCPA01	54	4749	4516	8/29/16	3/1/17	Contig	USDA	SAMN05390885	GCA_001716215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/215/GCA_001716215.1_ASM171621v1	-	ARS-CC521
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37026	65.6	-	MRFH01	19	4272	4105	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094113	GCA_002130355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/355/GCA_002130355.1_ASM213035v1	-	02-R0926
Escherichia coli 2-222-05_S4_C3	1444264	PRJNA233921	233921	Proteobacteria	Gammaproteobacteria	5.23972	50.6	-	JOSP01	200	5762	5135	6/27/14	2/23/17	Contig	IGS	SAMN02689036	GCA_000713785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/785/GCA_000713785.1_ASM71378v1	-	2-222-05_S4_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.00241	39.8	-	FYSZ01	45	2208	2022	6/25/17	7/5/17	Contig	SC	SAMEA1026570	GCA_900192255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/255/GCA_900192255.1_6512_7_18	-	UoS4252
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.04797	39.5	-	FYTM01	53	2233	2013	6/25/17	7/5/17	Contig	SC	SAMEA1026372	GCA_900192265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/265/GCA_900192265.1_6512_7_8	-	UoS4206
Escherichia coli 1-250-04_S3_C2	1444163	PRJNA233820	233820	Proteobacteria	Gammaproteobacteria	5.31792	50.9	-	JOSR01	303	5876	5081	6/27/14	2/23/17	Contig	IGS	SAMN02689029	GCA_000713815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/815/GCA_000713815.1_ASM71381v1	-	1-250-04_S3_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39566	65.6	-	MRFI01	14	4280	4099	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094114	GCA_002130375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/375/GCA_002130375.1_ASM213037v1	-	02-R0970
Salmonella enterica	28901	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.72487	52.1	-	MCPD01	52	4744	4516	8/29/16	3/1/17	Contig	USDA	SAMN05514380	GCA_001716225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/225/GCA_001716225.1_ASM171622v1	-	ARS-CC621
Staphylococcus aureus 22841	1413339	PRJNA226292	226292	Terrabacteria group	Firmicutes	2.74172	32.9	-	JJBS01	27	2831	2653	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391166	GCA_000637575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/575/GCA_000637575.1_Stap_aure_22841_V1	-	22841
Klebsiella pneumoniae	573	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.91592	57.8	-	DFXO01	93	-	-	9/27/17	9/27/17	Scaffold	University of Queensland	SAMN06452940	GCA_002383205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/383/205/GCA_002383205.1_ASM238320v1	28894102	-
Klebsiella pneumoniae	573	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.80234	57.9	-	DGJB01	49	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06454884	GCA_002386635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/635/GCA_002386635.1_ASM238663v1	28894102	-
Staphylococcus aureus 22843	1413340	PRJNA226293	226293	Terrabacteria group	Firmicutes	2.75042	32.9	-	JJBR01	39	2846	2657	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391167	GCA_000637595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/595/GCA_000637595.1_Stap_aure_22843_V1	-	22843
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.72224	52.1	-	MCPE01	61	4740	4510	8/29/16	3/1/17	Contig	USDA	SAMN05390912	GCA_001716235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/235/GCA_001716235.1_ASM171623v1	-	ARS-CC661
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40003	65.6	-	MRFL01	29	4293	4109	5/11/17	5/24/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094117	GCA_002130395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/395/GCA_002130395.1_ASM213039v1	-	97-R337
Escherichia coli 2-460-02_S1_C1	1444044	PRJNA233701	233701	Proteobacteria	Gammaproteobacteria	5.60714	50.6	-	JOSS01	197	6077	5517	6/27/14	2/23/17	Contig	IGS	SAMN02689040	GCA_000713825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/825/GCA_000713825.1_ASM71382v1	-	2-460-02_S1_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06777	39.6	-	FYTA01	55	2265	2055	6/25/17	7/5/17	Contig	SC	SAMEA1026418	GCA_900192275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/275/GCA_900192275.1_6486_5_4	-	UoS4285
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.02238	39.7	-	FYTH01	41	2220	1997	6/25/17	7/5/17	Contig	SC	SAMEA1026384	GCA_900192295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/295/GCA_900192295.1_6486_5_2	-	UoS4275
Escherichia coli 5-366-08_S4_C1	1444212	PRJNA233869	233869	Proteobacteria	Gammaproteobacteria	5.64547	50.4	-	JOST01	217	6130	5503	6/27/14	2/23/17	Contig	IGS	SAMN02689049	GCA_000713855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/855/GCA_000713855.1_ASM71385v1	-	5-366-08_S4_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39009	65.6	-	MRFM01	16	4271	4105	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094118	GCA_002130425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/425/GCA_002130425.1_ASM213042v1	-	98-R792
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.72413	52.1	-	MCPI01	67	4750	4512	8/29/16	3/1/17	Contig	USDA	SAMN05390915	GCA_001716275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/275/GCA_001716275.1_ASM171627v1	-	ARS-CC917
Staphylococcus aureus 22846	1413341	PRJNA226294	226294	Terrabacteria group	Firmicutes	2.74323	32.9	-	JJBQ01	32	2840	2658	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391168	GCA_000637615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/615/GCA_000637615.1_Stap_aure_22846_V1	-	22846
Klebsiella pneumoniae	573	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.43735	57.8	-	DGJL01	215	-	-	9/28/17	9/28/17	Scaffold	University of Queensland	SAMN06452775	GCA_002386725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/725/GCA_002386725.1_ASM238672v1	28894102	-
Staphylococcus aureus 22P79	1413438	PRJNA226391	226391	Terrabacteria group	Firmicutes	2.77808	32.9	-	JJBP01	38	2874	2695	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391265	GCA_000637635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/635/GCA_000637635.1_Stap_aure_22P79_V1	-	22P79
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.83151	52.1	-	MCPL01	86	4892	4645	8/29/16	3/1/17	Contig	USDA	SAMN05390890	GCA_001716295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/295/GCA_001716295.1_ASM171629v1	-	ARS-CC6181
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38165	65.6	-	MRFN01	18	4274	4103	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094119	GCA_002130445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/445/GCA_002130445.1_ASM213044v1	-	99-R1042
Escherichia coli 2-460-02_S1_C2	1444073	PRJNA233730	233730	Proteobacteria	Gammaproteobacteria	5.65911	50.7	-	JOSU01	172	6079	5598	6/27/14	2/23/17	Contig	IGS	SAMN02689041	GCA_000713865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/865/GCA_000713865.1_ASM71386v1	-	2-460-02_S1_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08706	39.6	-	FYTF01	54	2271	2062	6/25/17	7/5/17	Contig	SC	SAMEA1026370	GCA_900192305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/305/GCA_900192305.1_6486_5_1	-	UoS4273
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.04233	39.6	-	FYTD01	57	2231	2009	6/25/17	7/5/17	Contig	SC	SAMEA1026401	GCA_900192315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/315/GCA_900192315.1_6486_5_3	-	UoS4279
Escherichia coli 3-475-03_S3_C1	1444142	PRJNA233799	233799	Proteobacteria	Gammaproteobacteria	5.27518	50.6	-	JOQD01	145	5723	5272	6/27/14	2/23/17	Contig	IGS	SAMN02680204	GCA_000713895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/895/GCA_000713895.1_ASM71389v1	-	3-475-03_S3_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39135	65.6	-	MRFO01	11	4273	4094	5/11/17	5/22/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094120	GCA_002130455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/455/GCA_002130455.1_ASM213045v1	-	99-02018
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.9159	52	-	MCPK01	83	4984	4701	8/29/16	3/1/17	Contig	USDA	SAMN05390917	GCA_001716305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/305/GCA_001716305.1_ASM171630v1	-	ARS-CC5805
Staphylococcus aureus 23237	1413342	PRJNA226295	226295	Terrabacteria group	Firmicutes	2.73732	32.9	-	JJBO01	33	2828	2659	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391169	GCA_000637655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/655/GCA_000637655.1_Stap_aure_23237_V1	-	23237
Staphylococcus aureus 2393-15	1413414	PRJNA226367	226367	Terrabacteria group	Firmicutes	2.77814	32.9	-	JJBN01	36	2911	2712	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391241	GCA_000637675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/675/GCA_000637675.1_Stap_aure_2393-15_V1	-	2393-15
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.72373	52.1	-	MCPF01	59	4741	4509	8/29/16	3/1/17	Contig	USDA	SAMN05390913	GCA_001716335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/335/GCA_001716335.1_ASM171633v1	-	ARS-CC690
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38246	65.6	-	MRFS01	16	4270	4080	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094129	GCA_002130485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/485/GCA_002130485.1_ASM213048v1	-	M0001470-5
Escherichia coli 3-475-03_S1_C2	1444087	PRJNA233744	233744	Proteobacteria	Gammaproteobacteria	5.51222	50.6	-	JOQC01	175	5926	5380	6/27/14	2/23/17	Contig	IGS	SAMN02680258	GCA_000713905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/905/GCA_000713905.1_ASM71390v1	-	3-475-03_S1_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10525	39.5	-	FYTI01	54	2309	2092	6/25/17	7/5/17	Contig	SC	SAMEA1026436	GCA_900192345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/345/GCA_900192345.1_6486_5_5	-	UoS4287
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05618	39.6	-	FYTR01	46	2272	2012	6/25/17	7/5/17	Contig	SC	SAMEA1026502	GCA_900192365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/365/GCA_900192365.1_6486_5_6	-	UoS4289
Escherichia coli 3-475-03_S3_C2	1444170	PRJNA233827	233827	Proteobacteria	Gammaproteobacteria	5.4484	50.7	-	JOQE01	203	5934	5321	6/27/14	2/23/17	Contig	IGS	SAMN02680213	GCA_000713935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/935/GCA_000713935.1_ASM71393v1	-	3-475-03_S3_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39705	65.6	-	MRFV01	5	4277	4082	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094132	GCA_002130515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/515/GCA_002130515.1_ASM213051v1	-	M0021365-3
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.72754	52.1	-	MCPH01	70	4748	4512	8/29/16	3/1/17	Contig	USDA	SAMN05390887	GCA_001716345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/345/GCA_001716345.1_ASM171634v1	-	ARS-CC913
Staphylococcus aureus 2393-19	1413415	PRJNA226368	226368	Terrabacteria group	Firmicutes	2.76729	32.9	-	JJBM01	33	2891	2707	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391242	GCA_000637695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/695/GCA_000637695.1_Stap_aure_2393-19_V1	-	2393-19
Staphylococcus aureus 25(2889)	1413545	PRJNA226500	226500	Terrabacteria group	Firmicutes	2.81967	32.9	-	JJBL01	35	2951	2761	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391372	GCA_000637715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/715/GCA_000637715.1_Stap_aure_252889_V1	-	25(2889)
Salmonella enterica	28901	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.8671	52.1	-	MCQE01	88	4961	4701	8/29/16	3/1/17	Contig	USDA	SAMN05517975	GCA_001716375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/375/GCA_001716375.1_ASM171637v1	-	ARS-CC274
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39691	65.6	-	MRFX01	5	4273	4083	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094134	GCA_002130525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/525/GCA_002130525.1_ASM213052v1	-	M0008101-9
Escherichia coli 4-203-08_S1_C2	1444088	PRJNA233745	233745	Proteobacteria	Gammaproteobacteria	5.3254	50.8	-	JOQF01	183	5626	5132	6/27/14	2/23/17	Contig	IGS	SAMN02680215	GCA_000713945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/945/GCA_000713945.1_ASM71394v1	-	4-203-08_S1_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.0475	39.5	-	FYTN01	41	2245	2029	6/25/17	7/5/17	Contig	SC	SAMEA1026553	GCA_900192375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/375/GCA_900192375.1_6569_8_16	-	UoS5098
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07694	39.6	-	FYTO01	58	2278	2040	6/25/17	7/5/17	Contig	SC	SAMEA1026473	GCA_900192395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/395/GCA_900192395.1_6486_5_8	-	UoS4294
Escherichia coli 4-203-08_S1_C3	1444113	PRJNA233770	233770	Proteobacteria	Gammaproteobacteria	5.30235	50.7	-	JOQG01	167	5632	5136	6/27/14	2/23/17	Contig	IGS	SAMN02680223	GCA_000713975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/975/GCA_000713975.1_ASM71397v1	-	4-203-08_S1_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39044	65.6	-	MRFY01	6	4266	4085	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094135	GCA_002130565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/565/GCA_002130565.1_ASM213056v1	-	M0008635-6
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.88367	52	-	MCPJ01	85	4960	4689	8/29/16	3/1/17	Contig	USDA	SAMN05390916	GCA_001716385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/385/GCA_001716385.1_ASM171638v1	-	ARS-CC5795
Staphylococcus aureus 27999-3	1413406	PRJNA226359	226359	Terrabacteria group	Firmicutes	2.75034	32.9	-	JJBK01	37	2822	2640	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391233	GCA_000637735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/735/GCA_000637735.1_Stap_aure_27999-3_V1	-	27999-3
Staphylococcus aureus 28(18S1K13-24-05)	1413557	PRJNA226512	226512	Terrabacteria group	Firmicutes	2.82768	32.9	-	JJBJ01	56	2953	2752	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391384	GCA_000637755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/755/GCA_000637755.1_Stap_aure_2818S1K13-24-05_V1	-	28(18S1K13-24-05)
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.72934	52.1	-	MCPB01	64	4745	4510	8/29/16	3/1/17	Contig	USDA	SAMN05390888	GCA_001716405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/405/GCA_001716405.1_ASM171640v1	-	ARS-CC526
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38396	65.6	-	MRGC01	13	4268	4078	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094139	GCA_002130585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/585/GCA_002130585.1_ASM213058v1	-	M0018124-9
Escherichia coli 4-203-08_S3_C3	1444196	PRJNA233853	233853	Proteobacteria	Gammaproteobacteria	4.77748	50.8	-	JOQH01	116	4999	4522	6/27/14	2/23/17	Contig	IGS	SAMN02680207	GCA_000713985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/713/985/GCA_000713985.1_ASM71398v1	-	4-203-08_S3_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07038	39.6	-	FYTQ01	48	2279	2047	6/25/17	7/5/17	Contig	SC	SAMEA1026454	GCA_900192405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/405/GCA_900192405.1_6486_5_7	-	UoS4292
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03991	39.6	-	FYTT01	53	2236	1997	6/25/17	7/5/17	Contig	SC	SAMEA1026544	GCA_900192415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/415/GCA_900192415.1_6486_5_9	-	UoS4297
Escherichia coli 4-203-08_S4_C2	1444254	PRJNA233911	233911	Proteobacteria	Gammaproteobacteria	5.06992	50.6	-	JOQI01	172	5429	4836	6/27/14	2/23/17	Contig	IGS	SAMN02680182	GCA_000714015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/015/GCA_000714015.1_ASM71401v1	-	4-203-08_S4_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38806	65.6	-	MRGE01	3	4262	4080	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094141	GCA_002130605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/605/GCA_002130605.1_ASM213060v1	-	M0022516-0
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.72554	52.1	-	MCPC01	58	4741	4509	8/29/16	3/1/17	Contig	USDA	SAMN05390886	GCA_001716425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/425/GCA_001716425.1_ASM171642v1	-	ARS-CC572
Staphylococcus aureus 36P1	1413589	PRJNA226544	226544	Terrabacteria group	Firmicutes	2.72886	32.9	-	JJBH01	32	2838	2657	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391416	GCA_000637775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/775/GCA_000637775.1_Stap_aure_36P1_V1	-	36P1
Staphylococcus aureus 36P5	1413590	PRJNA226545	226545	Terrabacteria group	Firmicutes	2.75215	32.9	-	JJBG01	28	2835	2661	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391417	GCA_000637795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/795/GCA_000637795.1_Stap_aure_36P5_V1	-	36P5
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.82704	52.1	-	MCPN01	54	4862	4625	8/29/16	3/1/17	Contig	USDA	SAMN05390892	GCA_001716455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/455/GCA_001716455.1_ASM171645v1	-	ARS-CC6204
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38609	65.6	-	MRGA01	4	4257	4071	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094137	GCA_002130615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/615/GCA_002130615.1_ASM213061v1	-	M0020865-3
Escherichia coli 4-203-08_S3_C1	1444143	PRJNA233800	233800	Proteobacteria	Gammaproteobacteria	5.03099	50.5	-	JOQJ01	171	5434	4842	6/27/14	2/23/17	Contig	IGS	SAMN02680128	GCA_000714025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/025/GCA_000714025.1_ASM71402v1	-	4-203-08_S3_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.02985	39.7	-	FYTV01	36	2230	1991	6/25/17	7/5/17	Contig	SC	SAMEA1026539	GCA_900192465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/465/GCA_900192465.1_6486_5_13	-	UoS4314
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.01141	39.7	-	FYTW01	49	2208	2003	6/25/17	7/5/17	Contig	SC	SAMEA1026375	GCA_900192475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/475/GCA_900192475.1_6486_5_15	-	UoS4320
Escherichia coli 4-203-08_S3_C2	1444171	PRJNA233828	233828	Proteobacteria	Gammaproteobacteria	4.76042	50.8	-	JOQK01	105	5000	4527	6/27/14	2/23/17	Contig	IGS	SAMN02680238	GCA_000714055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/055/GCA_000714055.1_ASM71405v1	-	4-203-08_S3_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.396	65.6	-	MRGD01	10	4275	4083	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094140	GCA_002130625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/625/GCA_002130625.1_ASM213062v1	-	M0022539-2
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.82611	52.1	-	MCPO01	69	4881	4644	8/29/16	3/1/17	Contig	USDA	SAMN05390893	GCA_001716475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/475/GCA_001716475.1_ASM171647v1	-	ARS-CC6329
Staphylococcus aureus 37(18S2S5-05)	1413559	PRJNA226514	226514	Terrabacteria group	Firmicutes	2.87324	32.8	-	JJBF01	54	2995	2793	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391386	GCA_000637815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/815/GCA_000637815.1_Stap_aure_3718S2S5-05_V1	-	37(18S2S5-05)
Staphylococcus aureus 40P10	1413592	PRJNA226547	226547	Terrabacteria group	Firmicutes	2.76558	32.8	-	JJBE01	36	2878	2691	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391419	GCA_000637835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/835/GCA_000637835.1_Stap_aure_40P10_V1	-	40P10
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.72081	52.1	-	MCPG01	60	4742	4504	8/29/16	3/1/17	Contig	USDA	SAMN05390914	GCA_001716485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/485/GCA_001716485.1_ASM171648v1	-	ARS-CC912
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39389	65.6	-	MRGH01	1	4267	4114	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094144	GCA_002130665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/665/GCA_002130665.1_ASM213066v1	-	M0006465-0
Escherichia coli 3-373-03_S4_C3	1444279	PRJNA233936	233936	Proteobacteria	Gammaproteobacteria	5.29447	50.6	-	JOQL01	180	5759	5193	6/27/14	2/23/17	Contig	IGS	SAMN02687509	GCA_000714065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/065/GCA_000714065.1_ASM71406v1	-	3-373-03_S4_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.0404	39.6	-	FYTY01	56	2205	1999	6/25/17	7/5/17	Contig	SC	SAMEA1026825	GCA_900192485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/485/GCA_900192485.1_6486_5_18	-	UoS4330
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.04538	39.6	-	FYUA01	43	2247	2014	6/25/17	7/5/17	Contig	SC	SAMEA1026821	GCA_900192495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/495/GCA_900192495.1_6486_5_19	-	UoS4337
Escherichia coli 5-366-08_S4_C2	1444240	PRJNA233897	233897	Proteobacteria	Gammaproteobacteria	5.21542	50.5	-	JOQM01	225	5710	5016	6/27/14	2/23/17	Contig	IGS	SAMN02680208	GCA_000714095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/095/GCA_000714095.1_ASM71409v1	-	5-366-08_S4_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39278	65.6	-	MRGJ01	1	4267	4112	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094146	GCA_002130685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/685/GCA_002130685.1_ASM213068v1	-	M0013032-9
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.88113	52	-	MCQB01	64	4945	4702	8/29/16	3/1/17	Contig	USDA	SAMN05390900	GCA_001716495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/495/GCA_001716495.1_ASM171649v1	-	ARS-CC8624
Staphylococcus aureus 40P5 1_1	1413591	PRJNA226546	226546	Terrabacteria group	Firmicutes	2.75373	32.9	-	JJBD01	46	2860	2696	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391418	GCA_000637855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/855/GCA_000637855.1_Stap_aure_40P5_1_1_V1	-	40P5 1_1
Staphylococcus aureus 43P3	1413593	PRJNA226548	226548	Terrabacteria group	Firmicutes	2.73219	32.9	-	JJBC01	21	2806	2652	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391420	GCA_000637875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/875/GCA_000637875.1_Stap_aure_43P3_V1	-	43P3
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.94168	52.1	-	MCPP01	73	5021	4779	8/29/16	3/1/17	Contig	USDA	SAMN05390894	GCA_001716535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/535/GCA_001716535.1_ASM171653v1	-	ARS-CC6333
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40103	65.6	-	MRGK01	1	4274	4121	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094147	GCA_002130695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/695/GCA_002130695.1_ASM213069v1	-	M0014892-5
Escherichia coli 5-172-05_S4_C2	1444239	PRJNA233896	233896	Proteobacteria	Gammaproteobacteria	5.06031	50.5	-	JOQN01	109	5346	4906	6/27/14	2/23/17	Contig	IGS	SAMN02687503	GCA_000714105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/105/GCA_000714105.1_ASM71410v1	-	5-172-05_S4_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05315	39.5	-	FYUE01	35	2250	2024	6/25/17	7/5/17	Contig	SC	SAMEA1026837	GCA_900192505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/505/GCA_900192505.1_6486_5_17	-	UoS4326
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10572	39.6	-	FYUB01	61	2318	2098	6/25/17	7/5/17	Contig	SC	SAMEA1026797	GCA_900192515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/515/GCA_900192515.1_6486_5_16	-	UoS4322
Escherichia coli 5-172-05_S3_C3	1444186	PRJNA233843	233843	Proteobacteria	Gammaproteobacteria	5.1925	50.8	-	JOQO01	193	5660	5009	6/27/14	2/23/17	Contig	IGS	SAMN02687514	GCA_000714135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/135/GCA_000714135.1_ASM71413v1	-	5-172-05_S3_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40404	65.6	-	MRGN01	1	4280	4129	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094150	GCA_002130705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/705/GCA_002130705.1_ASM213070v1	-	M0000827-7
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.82132	52.1	-	MCPQ01	60	4877	4635	8/29/16	3/1/17	Contig	USDA	SAMN05390895	GCA_001716555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/555/GCA_001716555.1_ASM171655v1	-	ARS-CC6340
Staphylococcus aureus 43P8	1413594	PRJNA226549	226549	Terrabacteria group	Firmicutes	2.7341	32.9	-	JJBB01	25	2832	2653	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391421	GCA_000637895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/895/GCA_000637895.1_Stap_aure_43P8_V1	-	43P8
Staphylococcus aureus 44(2608)	1413546	PRJNA226501	226501	Terrabacteria group	Firmicutes	2.83073	32.9	-	JJBA01	45	2969	2772	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391373	GCA_000637915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/915/GCA_000637915.1_Stap_aure_442608_V1	-	44(2608)
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.81816	52.1	-	MCPR01	63	4858	4631	8/29/16	3/1/17	Contig	USDA	SAMN05390903	GCA_001716575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/575/GCA_001716575.1_ASM171657v1	-	ARS-CC7487
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40626	65.6	-	MRGO01	2	4282	4114	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094151	GCA_002130745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/745/GCA_002130745.1_ASM213074v1	-	M0001157-8
Escherichia coli 5-172-05_S4_C1	1444211	PRJNA233868	233868	Proteobacteria	Gammaproteobacteria	5.04687	50.5	-	JOQP01	113	5343	4893	6/27/14	2/23/17	Contig	IGS	SAMN02680256	GCA_000714145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/145/GCA_000714145.1_ASM71414v1	-	5-172-05_S4_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05104	39.5	-	FYUJ01	68	2248	2005	6/25/17	7/5/17	Contig	SC	SAMEA1026757	GCA_900192545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/545/GCA_900192545.1_6486_6_1	-	UoS4344
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10514	39.5	-	FYUG01	54	2282	2068	6/25/17	7/5/17	Contig	SC	SAMEA1026650	GCA_900192565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/565/GCA_900192565.1_6486_6_2	-	UoS4346
Escherichia coli 5-172-05_S3_C1	1444128	PRJNA233785	233785	Proteobacteria	Gammaproteobacteria	5.08965	50.6	-	JOQQ01	181	5510	4913	6/27/14	2/23/17	Contig	IGS	SAMN02687513	GCA_000714175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/175/GCA_000714175.1_ASM71417v1	-	5-172-05_S3_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39451	65.6	-	MRGW01	1	4271	4111	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094159	GCA_002130765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/765/GCA_002130765.1_ASM213076v1	-	M0012810-9
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.96474	52.1	-	MCPT01	111	5049	4800	8/29/16	3/1/17	Contig	USDA	SAMN05390906	GCA_001716585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/585/GCA_001716585.1_ASM171658v1	-	ARS-CC8294
Staphylococcus aureus 47P5	1413595	PRJNA226550	226550	Terrabacteria group	Firmicutes	2.78991	32.9	-	JJAY01	38	2883	2700	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391422	GCA_000637935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/935/GCA_000637935.1_Stap_aure_47P5_V1	-	47P5
Staphylococcus aureus 47P9	1413596	PRJNA226551	226551	Terrabacteria group	Firmicutes	2.77273	32.9	-	JJAX01	39	2870	2689	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391423	GCA_000637955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/955/GCA_000637955.1_Stap_aure_47P9_V1	-	47P9
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.87832	52	-	MCPU01	78	4936	4708	8/29/16	3/1/17	Contig	USDA	SAMN05390907	GCA_001716615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/615/GCA_001716615.1_ASM171661v1	-	ARS-CC8297
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39669	65.6	-	MRGT01	3	4274	4111	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094156	GCA_002130775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/775/GCA_002130775.1_ASM213077v1	-	M0003470-3
Escherichia coli 6-175-07_S1_C1	1444061	PRJNA233718	233718	Proteobacteria	Gammaproteobacteria	4.97699	50.7	-	JOQR01	102	5349	4942	6/27/14	2/23/17	Contig	IGS	SAMN02680257	GCA_000714185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/185/GCA_000714185.1_ASM71418v1	-	6-175-07_S1_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.0995	39.6	-	FYUF01	55	2324	2104	6/25/17	7/5/17	Contig	SC	SAMEA1026665	GCA_900192575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/575/GCA_900192575.1_6486_6_3	-	UoS4350
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10361	39.6	-	FYUI01	55	2302	2090	6/25/17	7/5/17	Contig	SC	SAMEA1026426	GCA_900192605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/605/GCA_900192605.1_6486_6_5	-	UoS4361
Escherichia coli 5-172-05_S1_C3	1444101	PRJNA233758	233758	Proteobacteria	Gammaproteobacteria	4.85396	51	-	JOQS01	185	5260	4588	6/27/14	2/23/17	Contig	IGS	SAMN02680175	GCA_000714215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/215/GCA_000714215.1_ASM71421v1	-	5-172-05_S1_C3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38305	65.6	-	MRGQ01	3	4250	4086	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094153	GCA_002130785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/785/GCA_002130785.1_ASM213078v1	-	M0001645-2
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.83793	52.1	-	MCPW01	65	4893	4661	8/29/16	3/1/17	Contig	USDA	SAMN05390909	GCA_001716625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/625/GCA_001716625.1_ASM171662v1	-	ARS-CC8446
Staphylococcus aureus 5670-1	1413384	PRJNA226337	226337	Terrabacteria group	Firmicutes	2.79497	32.9	-	JJAV01	39	2893	2699	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391211	GCA_000637975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/975/GCA_000637975.1_Stap_aure_5670-1_V1	-	5670-1
Staphylococcus aureus 56824-10	1413410	PRJNA226363	226363	Terrabacteria group	Firmicutes	2.85116	32.7	-	JJAU01	56	2928	2739	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391237	GCA_000637995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/637/995/GCA_000637995.1_Stap_aure_56824-10_V1	-	56824-10
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.81563	52.1	-	MCPV01	63	4862	4629	8/29/16	3/1/17	Contig	USDA	SAMN05390908	GCA_001716655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/655/GCA_001716655.1_ASM171665v1	-	ARS-CC8417
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39291	65.6	-	MRGX01	6	4262	4103	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094160	GCA_002130825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/825/GCA_002130825.1_ASM213082v1	-	M0006043-5
Escherichia coli 5-172-05_S4_C3	1444269	PRJNA233926	233926	Proteobacteria	Gammaproteobacteria	5.01243	50.5	-	JOQT01	110	5288	4852	6/27/14	2/23/17	Contig	IGS	SAMN02687475	GCA_000714225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/225/GCA_000714225.1_ASM71422v1	-	5-172-05_S4_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07232	39.6	-	FYUN01	58	2285	2032	6/25/17	7/5/17	Contig	SC	SAMEA1026387	GCA_900192625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/625/GCA_900192625.1_6486_6_8	-	UoS4366
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03594	39.6	-	FYUR01	40	2229	2005	6/25/17	7/5/17	Contig	SC	SAMEA1026399	GCA_900192635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/635/GCA_900192635.1_6486_6_9	-	UoS4369
Escherichia coli 5-366-08_S1_C1	1444047	PRJNA233704	233704	Proteobacteria	Gammaproteobacteria	5.44634	50.6	-	JOQU01	123	5769	5331	6/27/14	2/23/17	Contig	IGS	SAMN02680210	GCA_000714255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/255/GCA_000714255.1_ASM71425v1	-	5-366-08_S1_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40672	65.6	-	MRHB01	2	4288	4109	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094164	GCA_002130845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/845/GCA_002130845.1_ASM213084v1	-	M0008211-6
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.94489	52.1	-	MCPY01	61	5037	4790	8/29/16	3/1/17	Contig	USDA	SAMN05390897	GCA_001716665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/665/GCA_001716665.1_ASM171666v1	-	ARS-CC8574
Staphylococcus aureus 56824-15	1413411	PRJNA226364	226364	Terrabacteria group	Firmicutes	2.77576	32.8	-	JJAT01	34	2856	2677	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391238	GCA_000638015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/015/GCA_000638015.1_Stap_aure_56824-15_V1	-	56824-15
Staphylococcus aureus 56824-2	1413407	PRJNA226360	226360	Terrabacteria group	Firmicutes	2.73365	32.9	-	JJAS01	32	2816	2631	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391234	GCA_000638035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/035/GCA_000638035.1_Stap_aure_56824-2_V1	-	56824-2
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.83071	52.1	-	MCPX01	94	4868	4629	8/29/16	3/1/17	Contig	USDA	SAMN05390896	GCA_001716695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/695/GCA_001716695.1_ASM171669v1	-	ARS-CC8561
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40404	65.6	-	MRHA01	1	4277	4116	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094163	GCA_002130855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/855/GCA_002130855.1_ASM213085v1	-	M0006024-5
Escherichia coli 5-366-08_S3_C3	1444187	PRJNA233844	233844	Proteobacteria	Gammaproteobacteria	5.25345	50.7	-	JOQV01	102	5490	5068	6/27/14	2/23/17	Contig	IGS	SAMN02680142	GCA_000714265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/265/GCA_000714265.1_ASM71426v1	-	5-366-08_S3_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06174	39.6	-	FYUS01	57	2264	2026	6/25/17	7/5/17	Contig	SC	SAMEA1026778	GCA_900192645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/645/GCA_900192645.1_6486_6_10	-	UoS4370
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.04182	39.5	-	FYUP01	44	2240	2026	6/25/17	7/5/17	Contig	SC	SAMEA1026716	GCA_900192655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/655/GCA_900192655.1_6486_6_13	-	UoS4373
Escherichia coli 5-366-08_S3_C2	1444157	PRJNA233814	233814	Proteobacteria	Gammaproteobacteria	5.40412	50.5	-	JOQW01	174	5812	5299	6/27/14	2/23/17	Contig	IGS	SAMN02680235	GCA_000714295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/295/GCA_000714295.1_ASM71429v1	-	5-366-08_S3_C2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39801	65.6	-	MRHC01	3	4275	4110	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094165	GCA_002130865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/865/GCA_002130865.1_ASM213086v1	-	M0009138-0
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.95563	52.1	-	MCPZ01	85	5032	4791	8/29/16	3/1/17	Contig	USDA	SAMN05390898	GCA_001716715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/715/GCA_001716715.1_ASM171671v1	-	ARS-CC8601
Staphylococcus aureus 56824-21	1413412	PRJNA226365	226365	Terrabacteria group	Firmicutes	2.80488	32.8	-	JJAR01	45	2890	2700	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391239	GCA_000638055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/055/GCA_000638055.1_Stap_aure_56824-21_V1	-	56824-21
Staphylococcus aureus 56824-5	1413408	PRJNA226361	226361	Terrabacteria group	Firmicutes	2.82412	32.9	-	JJAQ01	34	2922	2724	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391235	GCA_000638075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/075/GCA_000638075.1_Stap_aure_56824-5_V1	-	56824-5
Salmonella enterica	28901	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.86531	52.1	-	MCQF01	84	4959	4695	8/29/16	3/1/17	Contig	USDA	SAMN05517976	GCA_001716725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/725/GCA_001716725.1_ASM171672v1	-	ARS-CC273
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40553	65.6	-	MRHE01	2	4285	4109	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094167	GCA_002130895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/895/GCA_002130895.1_ASM213089v1	-	M0011993-4
Escherichia coli 5-366-08_S3_C1	1444129	PRJNA233786	233786	Proteobacteria	Gammaproteobacteria	5.33179	50.7	-	JOQY01	124	5585	5146	6/27/14	2/23/17	Contig	IGS	SAMN02680196	GCA_000714335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/335/GCA_000714335.1_ASM71433v1	-	5-366-08_S3_C1
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05839	39.5	-	FYUT01	69	2247	2028	6/25/17	7/5/17	Contig	SC	SAMEA1026743	GCA_900192665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/665/GCA_900192665.1_6486_6_11	-	UoS4371
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.02944	39.6	-	FYUX01	62	2217	1992	6/25/17	7/5/17	Contig	SC	SAMEA1026536	GCA_900192675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/675/GCA_900192675.1_6486_6_14	-	UoS4375
Escherichia coli 6-175-07_S3_C1	1444144	PRJNA233801	233801	Proteobacteria	Gammaproteobacteria	5.23767	50.6	-	JOQZ01	106	5536	5122	6/27/14	2/23/17	Contig	IGS	SAMN02680201	GCA_000714345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/345/GCA_000714345.1_ASM71434v1	-	6-175-07_S3_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38451	65.6	-	MRHG01	13	4257	4086	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094169	GCA_002130925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/925/GCA_002130925.1_ASM213092v1	-	M0014577-2
Salmonella enterica	28901	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.85587	52.1	-	MCQG01	42	4949	4693	8/29/16	3/1/17	Contig	USDA	SAMN05517977	GCA_001716745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/745/GCA_001716745.1_ASM171674v1	-	ARS-CC938
Staphylococcus aureus 56824-7	1413409	PRJNA226362	226362	Terrabacteria group	Firmicutes	2.80967	32.9	-	JJAP01	36	2923	2726	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391236	GCA_000638095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/095/GCA_000638095.1_Stap_aure_56824-7_V1	-	56824-7
Staphylococcus aureus 56864-11	1413413	PRJNA226366	226366	Terrabacteria group	Firmicutes	2.87799	32.7	-	JJAO01	59	2993	2817	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391240	GCA_000638115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/115/GCA_000638115.1_Stap_aure_56864-11_V1	-	56864-11
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.88007	52	-	MCQC01	60	4955	4709	8/29/16	3/1/17	Contig	USDA	SAMN05390901	GCA_001716775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/775/GCA_001716775.1_ASM171677v1	-	ARS-CC8625
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39957	65.6	-	MRHL01	2	4274	4109	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094174	GCA_002130945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/945/GCA_002130945.1_ASM213094v1	-	M0010636-0
Escherichia coli 6-175-07_S3_C3	1444197	PRJNA233854	233854	Proteobacteria	Gammaproteobacteria	5.37001	50.5	-	JORA01	106	5732	5231	6/27/14	2/23/17	Contig	IGS	SAMN02680176	GCA_000714375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/375/GCA_000714375.1_ASM71437v1	-	6-175-07_S3_C3
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06458	39.6	-	FYUO01	45	2279	2050	6/25/17	7/5/17	Contig	SC	SAMEA1026726	GCA_900192685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/685/GCA_900192685.1_6486_6_12	-	UoS4372
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.01159	39.7	-	FYUQ01	45	2200	2002	6/25/17	7/5/17	Contig	SC	SAMEA1026558	GCA_900192695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/695/GCA_900192695.1_6486_6_16	-	UoS4382
Escherichia coli 6-175-07_S4_C1	1444226	PRJNA233883	233883	Proteobacteria	Gammaproteobacteria	4.77827	50.8	-	JORB01	125	4993	4519	6/27/14	2/23/17	Contig	IGS	SAMN02680206	GCA_000714385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/385/GCA_000714385.1_ASM71438v1	-	6-175-07_S4_C1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39595	65.6	-	MRHK01	3	4274	4110	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094173	GCA_002130955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/955/GCA_002130955.1_ASM213095v1	-	M0011538-7
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.83929	52.1	-	MCQD01	121	4873	4635	8/29/16	3/1/17	Contig	USDA	SAMN05390902	GCA_001716785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/785/GCA_001716785.1_ASM171678v1	-	ARS-CC8633
Staphylococcus aureus 6665-5	1413385	PRJNA226338	226338	Terrabacteria group	Firmicutes	2.79137	32.9	-	JJAM01	32	2888	2697	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391212	GCA_000638135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/135/GCA_000638135.1_Stap_aure_6665-5_V1	-	6665-5
Staphylococcus aureus 75495-3	1413395	PRJNA226348	226348	Terrabacteria group	Firmicutes	2.8193	32.9	-	JJAL01	46	2912	2717	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391222	GCA_000638155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/155/GCA_000638155.1_Stap_aure_75495-3_V1	-	75495-3
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.9682	52	-	MCPS01	73	5041	4796	8/29/16	3/1/17	Contig	USDA	SAMN05390905	GCA_001716805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/805/GCA_001716805.1_ASM171680v1	-	ARS-CC8289
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40696	65.6	-	MRHR01	3	4285	4114	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094180	GCA_002131005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/005/GCA_002131005.1_ASM213100v1	-	M0014793-5
Escherichia coli 6-175-07_S4_C2	1444255	PRJNA233912	233912	Proteobacteria	Gammaproteobacteria	4.73116	50.8	-	JORC01	103	4978	4505	6/27/14	2/23/17	Contig	IGS	SAMN02687530	GCA_000714415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/415/GCA_000714415.1_ASM71441v1	-	6-175-07_S4_C2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05453	39.7	-	FYUZ01	42	2214	2020	6/25/17	7/5/17	Contig	SC	SAMEA1026540	GCA_900192705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/705/GCA_900192705.1_6486_6_15	-	UoS4380
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03178	39.6	-	FYUU01	44	2218	1989	6/25/17	7/5/17	Contig	SC	SAMEA1026335	GCA_900192725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/725/GCA_900192725.1_6486_6_19	-	UoS4386
Escherichia coli	562	PRJNA245436	245436	Proteobacteria	Gammaproteobacteria	5.4112	50.7	-	JMIZ01	10	5640	5161	6/27/14	2/23/17	Contig	UC Davis	SAMN02739483	GCA_000714895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/895/GCA_000714895.1_JA03_HGAP2	25523766	UCD_JA03_pb
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39533	65.6	-	MRHO01	13	4285	4105	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094177	GCA_002131015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/015/GCA_002131015.1_ASM213101v1	-	M0017269-3
Salmonella enterica subsp. enterica	59201	PRJNA337914	337914	Proteobacteria	Gammaproteobacteria	4.83096	52.1	-	MCQA01	81	4871	4628	8/29/16	3/1/17	Contig	USDA	SAMN05390899	GCA_001716825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/716/825/GCA_001716825.1_ASM171682v1	-	ARS-CC8619
Staphylococcus aureus 76669-6	1413396	PRJNA226349	226349	Terrabacteria group	Firmicutes	2.73801	32.9	-	JJAK01	37	2817	2626	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391223	GCA_000638175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/175/GCA_000638175.1_Stap_aure_76669-6_V1	-	76669-6
Staphylococcus aureus 7-B-1	1413327	PRJNA226280	226280	Terrabacteria group	Firmicutes	2.78406	32.7	-	JJAJ01	68	2918	2745	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391154	GCA_000638195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/195/GCA_000638195.1_Stap_aure_7-B-1_V1	-	7-B-1
Salmonella enterica subsp. enterica	59201	PRJNA339555	339555	Proteobacteria	Gammaproteobacteria	4.72371	52.1	-	MDTJ01	57	4751	4509	9/2/16	3/1/17	Contig	USDA	SAMN05596920	GCA_001720385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/385/GCA_001720385.1_ASM172038v1	-	S415
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39932	65.6	-	MRHP01	12	4285	4111	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094178	GCA_002131025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/025/GCA_002131025.1_ASM213102v1	-	M0014126-8
Escherichia coli	562	PRJNA245435	245435	Proteobacteria	Gammaproteobacteria	5.11999	50.5	-	JMJA01	3	5250	4879	6/27/14	2/23/17	Contig	UC Davis	SAMN02739484	GCA_000714915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/915/GCA_000714915.1_UCD_JA17_pb	25523766	UCD_JA17_pb
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.04068	39.6	-	FYUY01	59	2228	2004	6/25/17	7/5/17	Contig	SC	SAMEA1026389	GCA_900192735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/735/GCA_900192735.1_6486_6_22	-	UoS4399
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05078	39.6	-	FYVG01	59	2229	2006	6/25/17	7/5/17	Contig	SC	SAMEA1026340	GCA_900192755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/755/GCA_900192755.1_6486_6_18	-	UoS4385
Escherichia coli	562	PRJNA245433	245433	Proteobacteria	Gammaproteobacteria	5.55924	50.9	-	JMJC01	17	5959	5334	6/27/14	8/8/17	Contig	UC Davis	SAMN02739900	GCA_000714955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/955/GCA_000714955.1_UCD_JA62_pb	25523766	UCD_JA62_pb
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38045	65.6	-	MRHV01	8	4253	4081	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094184	GCA_002131085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/085/GCA_002131085.1_ASM213108v1	-	M0020843-0
Salmonella enterica subsp. enterica	59201	PRJNA339555	339555	Proteobacteria	Gammaproteobacteria	4.87969	52	-	MDTI01	72	4946	4671	9/2/16	3/1/17	Contig	USDA	SAMN05596825	GCA_001720445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/445/GCA_001720445.1_ASM172044v1	-	176.3
Staphylococcus aureus 81070	1413324	PRJNA226277	226277	Terrabacteria group	Firmicutes	2.8138	32.9	-	JJAI01	43	2940	2750	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391151	GCA_000638215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/215/GCA_000638215.1_Stap_aure_81070_V1	-	81070
Staphylococcus aureus 84069-2	1413397	PRJNA226350	226350	Terrabacteria group	Firmicutes	2.80634	32.9	-	JJAG01	32	2936	2741	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391224	GCA_000638235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/235/GCA_000638235.1_Stap_aure_84069-2_V1	-	84069-2
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.75926	52.1	-	JWQH01	41	4874	4634	9/13/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN03079717	GCA_001723795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/723/795/GCA_001723795.1_ASM172379v1	-	CFSAN024772
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40835	65.6	-	MRHW01	5	4289	4110	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094185	GCA_002131105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/105/GCA_002131105.1_ASM213110v1	-	M0019957-1
Escherichia coli	562	PRJNA245432	245432	Proteobacteria	Gammaproteobacteria	4.8761	50.8	-	JMJD01	3	4951	4609	6/27/14	2/23/17	Contig	UC Davis	SAMN02740841	GCA_000714975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/975/GCA_000714975.1_JA65_HGAP2	25523766	UCD_JA65_pb
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05056	39.7	-	FYUV01	49	2254	2043	6/25/17	7/5/17	Contig	SC	SAMEA1026364	GCA_900192765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/765/GCA_900192765.1_6486_6_21	-	UoS4393
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05606	39.5	-	FYVF01	42	2221	2010	6/25/17	7/5/17	Contig	SC	SAMEA1026322	GCA_900192775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/775/GCA_900192775.1_6486_6_17	-	UoS4384
Escherichia coli	562	PRJNA245431	245431	Proteobacteria	Gammaproteobacteria	5.31987	50.6	-	JMJE01	27	5551	5031	6/27/14	2/23/17	Contig	UC Davis	SAMN02740843	GCA_000714995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/714/995/GCA_000714995.1_JA69_HGAP2	25523766	UCD_JA69_pb
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40317	65.6	-	MRIA01	10	4282	4109	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094189	GCA_002131115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/115/GCA_002131115.1_ASM213111v1	-	M0022188-8
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.79028	52.1	-	MKLO01	230	4925	4638	10/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05717002	GCA_001755865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/755/865/GCA_001755865.1_CFSAN008084	-	CFSAN008084
Staphylococcus aureus 86770-7	1413398	PRJNA226351	226351	Terrabacteria group	Firmicutes	2.77017	32.9	-	JJAF01	37	2872	2682	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391225	GCA_000638255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/255/GCA_000638255.1_Stap_aure_86770-7_V1	-	86770-7
Staphylococcus aureus 87807-1	1413389	PRJNA226342	226342	Terrabacteria group	Firmicutes	2.76936	32.9	-	JJAE01	31	2875	2688	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391216	GCA_000638275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/275/GCA_000638275.1_Stap_aure_87807-1_V1	-	87807-1
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.11597	52.1	-	MKLB01	71	5284	5026	10/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05717015	GCA_001755875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/755/875/GCA_001755875.1_CFSAN008071	-	CFSAN008071
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40981	65.6	-	MRIC01	8	4289	4117	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094191	GCA_002131135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/135/GCA_002131135.1_ASM213113v1	-	M0025473-1
Escherichia coli	562	PRJNA245434	245434	Proteobacteria	Gammaproteobacteria	4.90454	50.6	-	JMJB01	3	4972	4540	6/27/14	2/23/17	Contig	UC Davis	SAMN02739501	GCA_000715035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/035/GCA_000715035.1_UCD_JA23_pb	25523766	UCD_JA23_pb
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.96066	39.8	-	FYVD01	68	2153	1917	6/25/17	7/5/17	Contig	SC	SAMEA1026725	GCA_900192785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/785/GCA_900192785.1_6512_7_11	-	UoS4223
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05703	39.5	-	FYVA01	64	2239	2032	6/25/17	7/5/17	Contig	SC	SAMEA1026722	GCA_900192795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/795/GCA_900192795.1_6512_7_13	-	UoS4227
Escherichia coli D6-117.29	1400023	PRJEB4684	227250	Proteobacteria	Gammaproteobacteria	5.04982	50.4	-	CCCR01	980	5497	5034	5/11/14	2/23/17	Contig	INRA DE TOURS	SAMEA3139025	GCA_000723325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/325/GCA_000723325.1_V1	-	D6-117.29
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39044	65.6	-	MRID01	4	4259	4100	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094192	GCA_002131155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/155/GCA_002131155.1_ASM213115v1	-	M0000558-8
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.83022	52.2	-	MKLT01	168	4997	4707	10/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05716997	GCA_001755885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/755/885/GCA_001755885.1_CFSAN008089	-	CFSAN008089
Staphylococcus aureus 87807-11	1413390	PRJNA226343	226343	Terrabacteria group	Firmicutes	2.74437	32.9	-	JJAD01	44	2857	2664	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391217	GCA_000638295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/295/GCA_000638295.1_Stap_aure_87807-11_V1	-	87807-11
Staphylococcus aureus 87807-12	1413392	PRJNA226345	226345	Terrabacteria group	Firmicutes	2.77424	32.8	-	JJAC01	41	2851	2659	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391219	GCA_000638315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/315/GCA_000638315.1_Stap_aure_87807-12_V1	-	87807-12
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.04653	52.1	-	MKLE01	70	5184	4927	10/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05717012	GCA_001755895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/755/895/GCA_001755895.1_CFSAN008074	-	CFSAN008074
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38893	65.6	-	MRIE01	2	4258	4091	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094193	GCA_002131185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/185/GCA_002131185.1_ASM213118v1	-	M0001238-6
Escherichia coli DSM 30083 = JCM 1649 = ATCC 11775	866789	PRJNA59555	59555	Proteobacteria	Gammaproteobacteria	4.98058	50.6	-	JMST01	135	5185	4859	7/28/14	2/23/17	Contig	UW-GEL (University of Wisconsin - Genome Evolution Laboratory)	SAMN02742771	GCA_000734955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/734/955/GCA_000734955.1_ASM73495v1	-	ATCC 11775
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.97955	39.7	-	FYVC01	48	2163	1965	6/25/17	7/5/17	Contig	SC	SAMEA1026354	GCA_900192805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/805/GCA_900192805.1_6486_7_1	-	UoS5003
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07274	39.5	-	FYVI01	54	2241	2019	6/25/17	7/5/17	Contig	SC	SAMEA1026365	GCA_900192825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/825/GCA_900192825.1_6486_7_3	-	UoS5007
Escherichia coli	562	PRJNA256898	256898	Proteobacteria	Gammaproteobacteria	6.32315	50.5	-	JPQG01	21	6676	6130	7/31/14	2/23/17	Contig	"University of Zurich, Vetsuisse Faculty"	SAMN02911890	GCA_000736735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/735/GCA_000736735.1_ASM73673v1	25488108	48
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36137	65.6	-	MRIF01	4	4250	4082	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094194	GCA_002131195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/195/GCA_002131195.1_ASM213119v1	-	M0002403-5
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.07593	52.1	-	MKLJ01	64	5231	4975	10/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05717007	GCA_001755945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/755/945/GCA_001755945.1_CFSAN008079	-	CFSAN008079
Staphylococcus aureus 87807-16	1413393	PRJNA226346	226346	Terrabacteria group	Firmicutes	2.7687	32.9	-	JJAB01	38	2865	2671	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391220	GCA_000638335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/335/GCA_000638335.1_Stap_aure_87807-16_V1	-	87807-16
Staphylococcus aureus 87807-9	1413391	PRJNA226344	226344	Terrabacteria group	Firmicutes	2.78994	32.9	-	JJAA01	29	2908	2725	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391218	GCA_000638355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/355/GCA_000638355.1_Stap_aure_87807-9_V1	-	87807-9
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.1855	52	-	MKLK01	71	5358	5099	10/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05717006	GCA_001755955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/755/955/GCA_001755955.1_CFSAN008080	-	CFSAN008080
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3951	65.6	-	MRIH01	9	4271	4109	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094196	GCA_002131245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/245/GCA_002131245.1_ASM213124v1	-	M0003618-7
Escherichia coli	562	PRJNA251901	251901	Proteobacteria	Gammaproteobacteria	5.09995	50.7	-	JNOH01	260	5450	4734	8/15/14	8/8/17	Contig	Santa Clara University	SAMN02841130	GCA_000740535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/535/GCA_000740535.1_ASM74053v1	-	CS04
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06671	39.6	-	FYVN01	44	2279	2055	6/25/17	7/5/17	Contig	SC	SAMEA1026764	GCA_900192855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/855/GCA_900192855.1_6486_7_6	-	UoS5014
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.11686	39.5	-	FYVK01	50	2318	2081	6/25/17	7/5/17	Contig	SC	SAMEA1026775	GCA_900192865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/865/GCA_900192865.1_6486_7_7	-	UoS5015
Escherichia coli O157:H7 str. 09BKT048303	1387069	PRJNA215274	215274	Proteobacteria	Gammaproteobacteria	5.17271	50.2	-	JJOM01	884	5995	5037	9/3/14	3/5/17	Contig	National Veterinary Institute (SVA)	SAMN02317208	GCA_000747445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/445/GCA_000747445.1_O157_09BKT048303_454	25143581	09BKT048303
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38975	65.6	-	MRIJ01	9	4260	4092	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094198	GCA_002131265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/265/GCA_002131265.1_ASM213126v1	-	M0022871-9
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.02083	52.1	-	MKLD01	69	5159	4904	10/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05717013	GCA_001755985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/755/985/GCA_001755985.1_CFSAN008073	-	CFSAN008073
Staphylococcus aureus 88088-1	1413399	PRJNA226352	226352	Terrabacteria group	Firmicutes	2.82613	32.9	-	JIZZ01	43	2918	2732	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391226	GCA_000638375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/375/GCA_000638375.1_Stap_aure_88088-1_V1	-	88088-1
Staphylococcus aureus 88088-2	1413400	PRJNA226353	226353	Terrabacteria group	Firmicutes	2.7831	32.9	-	JIZY01	44	2883	2693	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391227	GCA_000638395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/395/GCA_000638395.1_Stap_aure_88088-2_V1	-	88088-2
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.89903	52.3	-	MKLN01	267	5105	4779	10/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05717003	GCA_001755995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/755/995/GCA_001755995.1_CFSAN008083	-	CFSAN008083
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39029	65.6	-	MRIK01	1	4258	4096	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094199	GCA_002131285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/285/GCA_002131285.1_ASM213128v1	-	M0005676-3
Escherichia coli O157:H7 str. T1543_06	1387071	PRJNA215274	215274	Proteobacteria	Gammaproteobacteria	5.29288	50.2	-	JJOK01	560	5962	5246	9/3/14	2/23/17	Contig	National Veterinary Institute (SVA)	SAMN02317210	GCA_000747455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/455/GCA_000747455.1_O157_T154306_454	25143581	T1543_06
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06053	39.6	-	FYVH01	46	2269	2045	6/25/17	7/5/17	Contig	SC	SAMEA1026783	GCA_900192875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/875/GCA_900192875.1_6486_7_5	-	UoS5013
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06158	39.5	-	FYVO01	57	2246	2027	6/25/17	7/5/17	Contig	SC	SAMEA1026738	GCA_900192895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/895/GCA_900192895.1_6486_7_9	-	UoS5020
Escherichia coli O157:H7 str. 08BKT061141	1387070	PRJNA215274	215274	Proteobacteria	Gammaproteobacteria	5.26489	50.2	-	JJOL01	944	6085	5132	9/3/14	3/5/17	Contig	National Veterinary Institute (SVA)	SAMN02317209	GCA_000747465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/465/GCA_000747465.1_O157_08BKT61141_454	25143581	08BKT061141
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38817	65.6	-	MRII01	1	4263	4103	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094197	GCA_002131295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/295/GCA_002131295.1_ASM213129v1	-	M0004757-2
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.90372	52.2	-	MKLL01	76	5029	4784	10/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05717005	GCA_001756025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/025/GCA_001756025.1_CFSAN008081	-	CFSAN008081
Staphylococcus aureus 9P9	1413586	PRJNA226541	226541	Terrabacteria group	Firmicutes	2.73769	32.8	-	JIZX01	31	2799	2620	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391413	GCA_000638415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/415/GCA_000638415.1_Stap_aure_9P9_V1	-	9P9
Staphylococcus aureus BG407	1413383	PRJNA226336	226336	Terrabacteria group	Firmicutes	2.8079	32.9	-	JIZW01	45	2908	2704	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391210	GCA_000638435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/435/GCA_000638435.1_Stap_aure_BG407_V1	-	BG407
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.9021	52.3	-	MKLQ01	349	5157	4789	10/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05717000	GCA_001756035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/035/GCA_001756035.1_CFSAN008086	-	CFSAN008086
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40494	65.6	-	MRIL01	9	4288	4092	5/11/17	5/24/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094200	GCA_002131325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/325/GCA_002131325.1_ASM213132v1	-	M0021400-8
Escherichia coli	562	PRJNA246239	246239	Proteobacteria	Gammaproteobacteria	4.99359	50.8	-	JNNL01	99	5236	4660	9/5/14	3/5/17	Contig	California Department of Public Health	SAMN02744547	GCA_000749545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/545/GCA_000749545.1_ASM74954v1	25301649	P.231
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.02819	39.5	-	FYVQ01	51	2209	1990	6/25/17	7/5/17	Contig	SC	SAMEA1026419	GCA_900192905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/905/GCA_900192905.1_6486_7_11	-	UoS5022
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.95104	39.8	-	FYVR01	43	2160	1922	6/25/17	7/5/17	Contig	SC	SAMEA1026439	GCA_900192915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/915/GCA_900192915.1_6486_7_12	-	UoS5023
Escherichia coli	562	PRJNA246239	246239	Proteobacteria	Gammaproteobacteria	5.04332	50.8	-	JNNJ01	133	5301	4822	9/5/14	2/23/17	Contig	California Department of Public Health	SAMN02744546	GCA_000749565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/565/GCA_000749565.1_ASM74956v1	25301649	H2.185
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35616	65.6	-	MRIM01	3	4241	4080	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094201	GCA_002131335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/335/GCA_002131335.1_ASM213133v1	-	M0012119-5
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.07666	52.1	-	MKLG01	64	5221	4971	10/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05717010	GCA_001756065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/065/GCA_001756065.1_CFSAN008076	-	CFSAN008076
Staphylococcus aureus C0630	1413508	PRJNA226463	226463	Terrabacteria group	Firmicutes	2.80441	32.8	-	JIZU01	31	2916	2734	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391335	GCA_000638455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/455/GCA_000638455.1_Stap_aure_C0630_V1	-	C0630
Staphylococcus aureus C0637	1413509	PRJNA226464	226464	Terrabacteria group	Firmicutes	2.80663	32.8	-	JIZT01	28	2913	2733	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391336	GCA_000638475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/475/GCA_000638475.1_Stap_aure_C0637_V1	-	C0637
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.00804	52.1	-	MKLH01	55	5152	4903	10/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05717009	GCA_001756075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/075/GCA_001756075.1_CFSAN008077	-	CFSAN008077
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3946	65.6	-	MRIN01	4	4264	4101	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094202	GCA_002131365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/365/GCA_002131365.1_ASM213136v1	-	M0009653-8
Escherichia coli	562	PRJNA246239	246239	Proteobacteria	Gammaproteobacteria	5.09756	51.1	-	JNNI01	292	5453	4842	9/5/14	3/5/17	Contig	California Department of Public Health	SAMN02744162	GCA_000749575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/575/GCA_000749575.1_ASM74957v1	25301649	H1.94
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05307	39.5	-	FYVP01	56	2241	2015	6/25/17	7/5/17	Contig	SC	SAMEA1026631	GCA_900192925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/925/GCA_900192925.1_6486_7_15	-	UoS5028
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.11155	39.5	-	FYVV01	67	2339	2086	6/25/17	7/5/17	Contig	SC	SAMEA1026396	GCA_900192935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/935/GCA_900192935.1_6486_7_13	-	UoS5026
Escherichia coli	562	PRJEB6026	248090	Proteobacteria	Gammaproteobacteria	4.55116	50.7	-	CCNI01	443	4729	4455	9/5/14	2/23/17	Contig	Insititute of Agrobiotecnology	SAMEA2500734	GCA_000751315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/315/GCA_000751315.1_assembly1	-	-
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39243	65.6	-	MRIO01	3	4264	4102	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094203	GCA_002131385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/385/GCA_002131385.1_ASM213138v1	-	M0012253-2
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.90279	52.3	-	MKLP01	338	5144	4769	10/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05717001	GCA_001756105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/105/GCA_001756105.1_CFSAN008085	-	CFSAN008085
Staphylococcus aureus C0673	1413510	PRJNA226465	226465	Terrabacteria group	Firmicutes	2.86451	32.5	-	JIZS01	38	2831	2725	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391337	GCA_000638495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/495/GCA_000638495.1_Stap_aure_C0673_V1	-	C0673
Staphylococcus aureus C1655	1413466	PRJNA226419	226419	Terrabacteria group	Firmicutes	2.79522	32.9	-	JIZQ01	31	2883	2709	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391293	GCA_000638515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/515/GCA_000638515.1_Stap_aure_C1655_V1	-	C1655
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.06072	52.1	-	MKLF01	63	5201	4951	10/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05717011	GCA_001756125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/125/GCA_001756125.1_CFSAN008075	-	CFSAN008075
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35309	65.6	-	MRIQ01	3	4245	4081	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094205	GCA_002131395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/395/GCA_002131395.1_ASM213139v1	-	M0015115-0
Escherichia coli	562	PRJNA259926	259926	Proteobacteria	Gammaproteobacteria	4.54383	50.6	-	JRBB01	102	4727	4430	9/16/14	2/23/17	Contig	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN03014289	GCA_000755445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/755/445/GCA_000755445.1_ASM75544v1	-	DH5a
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03431	39.6	-	FYVS01	64	2229	1985	6/25/17	7/5/17	Contig	SC	SAMEA1026689	GCA_900192945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/945/GCA_900192945.1_6486_7_16	-	UoS5030
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05353	39.6	-	FYVT01	58	2249	2032	6/25/17	7/5/17	Contig	SC	SAMEA1026385	GCA_900192955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/955/GCA_900192955.1_6486_7_14	-	UoS5027
Escherichia coli	562	PRJNA261007	261007	Proteobacteria	Gammaproteobacteria	4.93646	50.8	-	JRIA01	86	5116	4784	10/2/14	2/23/17	Contig	Centre Bioengineering RAS	SAMN03068206	GCA_000762385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/385/GCA_000762385.1_ASM76238v1	25414512	VKPM B-10182
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37819	65.6	-	MRIR01	3	4254	4092	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094206	GCA_002131445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/445/GCA_002131445.1_ASM213144v1	-	M0014480-9
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.77408	52.4	-	MKLS01	541	5111	4666	10/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05716998	GCA_001756135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/135/GCA_001756135.1_CFSAN008088	-	CFSAN008088
Staphylococcus aureus C1673	1413470	PRJNA226423	226423	Terrabacteria group	Firmicutes	2.82742	32.9	-	JIZP01	41	2934	2757	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391297	GCA_000638535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/535/GCA_000638535.1_Stap_aure_C1673_V1	-	C1673
Staphylococcus aureus C1842	1413461	PRJNA226414	226414	Terrabacteria group	Firmicutes	2.86389	32.9	-	JIZO01	48	2996	2800	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391288	GCA_000638555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/555/GCA_000638555.1_Stap_aure_C1842_V1	-	C1842
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.62117	52.4	-	MKLU01	890	5089	4443	10/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05716996	GCA_001756155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/155/GCA_001756155.1_CFSAN008090	-	CFSAN008090
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36564	65.6	-	MRIS01	5	4251	4084	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094207	GCA_002131455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/455/GCA_002131455.1_ASM213145v1	-	M0017287-5
Escherichia coli NCTC 50110	1333537	PRJNA202858	202858	Proteobacteria	Gammaproteobacteria	4.72541	50.7	-	ASRI01	113	4947	4635	10/15/14	2/23/17	Contig	University of Leeds	SAMN02837053	GCA_000766965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/766/965/GCA_000766965.1_CREcoli50110	25567964	NCTC 50110
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07392	39.6	-	FYVX01	54	2278	2040	6/25/17	7/5/17	Contig	SC	SAMEA1026681	GCA_900192965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/965/GCA_900192965.1_6486_7_18	-	UoS5038
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.04515	39.5	-	FYVU01	57	2211	2010	6/25/17	7/5/17	Contig	SC	SAMEA1026674	GCA_900192975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/975/GCA_900192975.1_6486_7_17	-	UoS5033
Escherichia coli	562	PRJNA245865	245865	Proteobacteria	Gammaproteobacteria	5.09033	50.8	-	JPKH01	252	5379	4905	10/24/14	2/23/17	Contig	"Technische Universitaet Dresden, Medical Faculty 'Carl Gustav Carus'"	SAMN02867339	GCA_000768405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/405/GCA_000768405.1_ASM76840v1	25745009	G1/2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38433	65.6	-	MRIT01	1	4251	4089	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094208	GCA_002131485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/485/GCA_002131485.1_ASM213148v1	-	M0014870-1
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.89759	52.2	-	MKLC01	67	4991	4748	10/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05717014	GCA_001756185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/185/GCA_001756185.1_CFSAN008072	-	CFSAN008072
Staphylococcus aureus C1891	1413458	PRJNA226411	226411	Terrabacteria group	Firmicutes	2.84625	32.9	-	JIZN01	41	3002	2805	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391285	GCA_000638575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/575/GCA_000638575.1_Stap_aure_C1891_V1	-	C1891
Staphylococcus aureus C1894	1413459	PRJNA226412	226412	Terrabacteria group	Firmicutes	2.79764	32.8	-	JIZM01	36	2922	2731	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391286	GCA_000638595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/595/GCA_000638595.1_Stap_aure_C1894_V1	-	C1894
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73721	52.3	-	MKLR01	378	5013	4606	10/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05716999	GCA_001756205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/205/GCA_001756205.1_CFSAN008087	-	CFSAN008087
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.42005	65.6	-	MRIU01	7	4286	4109	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094209	GCA_002131495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/495/GCA_002131495.1_ASM213149v1	-	M0018060-5
Escherichia coli	562	PRJNA245868	245868	Proteobacteria	Gammaproteobacteria	4.54582	50.7	-	JPKJ01	79	4594	4280	10/24/14	2/23/17	Contig	"Technische Universitaet Dresden, Medical Faculty 'Carl Gustav Carus'"	SAMN02867342	GCA_000768415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/415/GCA_000768415.1_ASM76841v1	25745009	G4/9
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.14128	39.4	-	FYVW01	61	2365	2110	6/25/17	7/5/17	Contig	SC	SAMEA1026732	GCA_900192995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/995/GCA_900192995.1_6486_7_19	-	UoS5040
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05934	39.6	-	FYWL01	50	2244	2026	6/25/17	7/5/17	Contig	SC	SAMEA1026564	GCA_900193125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/125/GCA_900193125.1_6569_8_18	-	UoS5109
Escherichia coli G3/10	1455601	PRJNA245867	245867	Proteobacteria	Gammaproteobacteria	4.99927	50.9	-	JPKI01	12	5224	4762	10/24/14	2/23/17	Contig	"Technische Universitaet Dresden, Medical Faculty 'Carl Gustav Carus'"	SAMN02867340	GCA_000768425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/425/GCA_000768425.1_ASM76842v1	25745009	G3/10
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39677	65.6	-	MRIV01	2	4262	4092	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094210	GCA_002131525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/525/GCA_002131525.1_ASM213152v1	-	M0018999-4
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.17291	52	-	MKLI01	77	5343	5091	10/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05717008	GCA_001756215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/215/GCA_001756215.1_CFSAN008078	-	CFSAN008078
Staphylococcus aureus C2549	1413481	PRJNA226435	226435	Terrabacteria group	Firmicutes	2.69648	32.9	-	JIZL01	29	2785	2612	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391308	GCA_000638615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/615/GCA_000638615.1_Stap_aure_C2549_V1	-	C2549
Staphylococcus aureus C2679	1413482	PRJNA226436	226436	Terrabacteria group	Firmicutes	2.67786	32.9	-	JIZK01	28	2770	2593	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391309	GCA_000638635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/635/GCA_000638635.1_Stap_aure_C2679_V1	-	C2679
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.77209	52.2	-	MKLM01	66	4861	4633	10/11/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05717004	GCA_001756245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/245/GCA_001756245.1_CFSAN008082	-	CFSAN008082
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41232	65.6	-	MRIW01	2	4270	4102	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094211	GCA_002131545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/545/GCA_002131545.1_ASM213154v1	-	M0021260-6
Escherichia coli	562	PRJNA245869	245869	Proteobacteria	Gammaproteobacteria	4.78758	50.8	-	JPKK01	151	4924	4562	10/24/14	2/23/17	Contig	"Technische Universitaet Dresden, Medical Faculty 'Carl Gustav Carus'"	SAMN02867357	GCA_000768485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/485/GCA_000768485.1_ASM76848v1	25745009	G5
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.04244	39.6	-	FYWO01	70	2254	2021	6/25/17	7/5/17	Contig	SC	SAMEA1026516	GCA_900193145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/145/GCA_900193145.1_6569_8_19	-	UoS5110
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06332	39.6	-	FYWP01	40	2276	2057	6/25/17	7/5/17	Contig	SC	SAMEA1026464	GCA_900193165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/165/GCA_900193165.1_6486_8_2	-	UoS5120
Escherichia coli	562	PRJNA245873	245873	Proteobacteria	Gammaproteobacteria	5.16021	50.8	-	JPKL01	300	5465	5016	10/24/14	2/23/17	Contig	"Technische Universitaet Dresden, Medical Faculty 'Carl Gustav Carus'"	SAMN02867359	GCA_000768505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/505/GCA_000768505.1_ASM76850v1	25745009	G8
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38471	65.6	-	MRIY01	1	4255	4098	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094213	GCA_002131555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/555/GCA_002131555.1_ASM213155v1	-	M0022470-0
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA335779	335779	Proteobacteria	Gammaproteobacteria	4.85921	52.3	-	MCGM01	161	4977	4722	10/12/16	3/1/17	Contig	Monash University Malaysia	SAMN05462047	GCA_001758445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/445/GCA_001758445.1_ASM175844v1	-	TT9097
Staphylococcus aureus C2706	1413467	PRJNA226420	226420	Terrabacteria group	Firmicutes	2.8311	32.9	-	JIZJ01	38	2954	2766	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391294	GCA_000638655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/655/GCA_000638655.1_Stap_aure_C2706_V1	-	C2706
Staphylococcus aureus C2928	1413474	PRJNA226427	226427	Terrabacteria group	Firmicutes	2.85641	32.9	-	JIZI01	42	2989	2798	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391301	GCA_000638675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/675/GCA_000638675.1_Stap_aure_C2928_V1	-	C2928
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA335775	335775	Proteobacteria	Gammaproteobacteria	4.86617	52.2	-	MCGL01	83	4968	4712	10/12/16	3/1/17	Contig	Monash University Malaysia	SAMN05462015	GCA_001758525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/525/GCA_001758525.1_ASM175852v1	-	TT6675
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39166	65.6	-	MRIX01	2	4261	4102	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094212	GCA_002131585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/585/GCA_002131585.1_ASM213158v1	-	M0024514-3
Escherichia coli	562	PRJNA252850	252850	Proteobacteria	Gammaproteobacteria	4.80875	50.5	-	JPUT01	287	5094	4618	10/30/14	2/23/17	Contig	Centers for Disease Control and Prevention	SAMN02951658	GCA_000770035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/035/GCA_000770035.1_ASM77003v1	25523765	2011EL-1370-2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07594	39.5	-	FYWZ01	32	2299	2075	6/25/17	7/5/17	Contig	SC	SAMEA1026443	GCA_900193185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/185/GCA_900193185.1_6486_8_3	-	UoS5121
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.01139	39.7	-	FYWX01	47	2205	1994	6/25/17	7/5/17	Contig	SC	SAMEA1026500	GCA_900193195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/195/GCA_900193195.1_6486_8_4	-	UoS5122
Escherichia coli	562	PRJNA252850	252850	Proteobacteria	Gammaproteobacteria	4.80105	50.5	-	JPUS01	324	5067	4614	10/30/14	2/23/17	Contig	Centers for Disease Control and Prevention	SAMN02951656	GCA_000770045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/045/GCA_000770045.1_ASM77004v1	25523765	2011EL-1369-1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38757	65.6	-	MRIZ01	3	4259	4094	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094214	GCA_002131595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/595/GCA_002131595.1_ASM213159v1	-	M0023347-9
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA341823	341823	Proteobacteria	Gammaproteobacteria	4.97673	52.1	-	MIJS01	47	5112	4782	10/13/16	7/11/17	Contig	NARIC	SAMN05729233	GCA_001766495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/495/GCA_001766495.1_ASM176649v1	27979950	SI3337/12
Staphylococcus aureus C2930	1413472	PRJNA226425	226425	Terrabacteria group	Firmicutes	2.79264	32.8	-	JIZH01	34	2906	2729	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391299	GCA_000638695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/695/GCA_000638695.1_Stap_aure_C2930_V1	-	C2930
Staphylococcus aureus C2942	1413475	PRJNA226428	226428	Terrabacteria group	Firmicutes	2.8313	32.9	-	JIZG01	59	2961	2760	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391302	GCA_000638715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/715/GCA_000638715.1_Stap_aure_C2942_V1	-	C2942
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA341823	341823	Proteobacteria	Gammaproteobacteria	4.935	52.2	-	MIJT01	53	5060	4724	10/13/16	7/11/17	Contig	NARIC	SAMN05729235	GCA_001766505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/505/GCA_001766505.1_ASM176650v1	27979950	SI757/13
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38978	65.6	-	MRJA01	7	4264	4093	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094215	GCA_002131625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/625/GCA_002131625.1_ASM213162v1	-	M0024027-6
Escherichia coli	562	PRJNA252850	252850	Proteobacteria	Gammaproteobacteria	4.96533	50.5	-	JPUU01	319	5272	4791	10/30/14	2/23/17	Contig	Centers for Disease Control and Prevention	SAMN02951668	GCA_000770055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/055/GCA_000770055.1_ASM77005v1	25523765	2011EL-1497-2
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09784	39.6	-	FYWQ01	55	2307	2086	6/25/17	7/5/17	Contig	SC	SAMEA1026543	GCA_900193205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/205/GCA_900193205.1_6486_8_1	-	UoS5119
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07691	39.6	-	FYWT01	37	2289	2072	6/25/17	7/5/17	Contig	SC	SAMEA1026485	GCA_900193215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/215/GCA_900193215.1_6486_8_5	-	UoS5124
Escherichia coli	562	PRJNA252850	252850	Proteobacteria	Gammaproteobacteria	4.71177	50.7	-	JPUD01	301	4946	4596	10/31/14	2/23/17	Contig	Centers for Disease Control and Prevention	SAMN02951527	GCA_000770255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/770/255/GCA_000770255.1_ASM77025v1	25523765	2013EL-1320-c5
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38499	65.6	-	MRJB01	10	4259	4106	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094216	GCA_002131645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/645/GCA_002131645.1_ASM213164v1	-	M0003138-6
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA341823	341823	Proteobacteria	Gammaproteobacteria	4.86728	52.2	-	MIJR01	48	4981	4646	10/13/16	7/11/17	Contig	NARIC	SAMN05729231	GCA_001766515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/766/515/GCA_001766515.1_ASM176651v1	27979950	SI786/13
Staphylococcus aureus C3489	1413454	PRJNA226407	226407	Terrabacteria group	Firmicutes	2.76582	32.9	-	JIZE01	45	2896	2709	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391281	GCA_000638735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/735/GCA_000638735.1_Stap_aure_C3489_V1	-	C3489
Staphylococcus aureus C3672	1413476	PRJNA226429	226429	Terrabacteria group	Firmicutes	2.85104	32.8	-	JIZD01	43	2993	2788	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391303	GCA_000638755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/755/GCA_000638755.1_Stap_aure_C3672_V1	-	C3672
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.01852	52.1	-	MLRD01	45	5177	4868	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961928	GCA_001831545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/545/GCA_001831545.1_ASM183154v1	-	CFSAN044867
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.4005	65.6	-	MRJC01	2	4271	4096	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094217	GCA_002131655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/655/GCA_002131655.1_ASM213165v1	-	M0005949-4
Escherichia coli	562	PRJNA252850	252850	Proteobacteria	Gammaproteobacteria	4.87298	50.6	-	JPXN01	309	5120	4694	11/7/14	2/23/17	Contig	Centers for Disease Control and Prevention	SAMN02954479	GCA_000773575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/575/GCA_000773575.1_ASM77357v1	25523765	2011EL-1640-5
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.04261	39.5	-	FYWS01	62	2221	2009	6/25/17	7/5/17	Contig	SC	SAMEA1026398	GCA_900193225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/225/GCA_900193225.1_6486_8_6	-	UoS5129
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.17478	39.6	-	FYWR01	90	2410	2170	6/25/17	7/5/17	Contig	SC	SAMEA1026394	GCA_900193235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/235/GCA_900193235.1_6486_8_8	-	UoS5135
Escherichia coli	562	PRJNA262133	262133	Proteobacteria	Gammaproteobacteria	5.19092	50.4	-	JRPP01	359	5524	5085	11/14/14	2/23/17	Contig	University of Copenhagen	SAMN03081277	GCA_000783335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/783/335/GCA_000783335.1_ASM78333v1	25540351	77.3009.5
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41007	65.6	-	MRJD01	2	4283	4115	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094218	GCA_002131685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/685/GCA_002131685.1_ASM213168v1	-	M0020454-6
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.01306	51.4	-	MLRB01	71	4975	4604	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961926	GCA_001831555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/555/GCA_001831555.1_ASM183155v1	-	CFSAN044865
Staphylococcus aureus C3865	1413456	PRJNA226409	226409	Terrabacteria group	Firmicutes	2.79621	32.9	-	JIZC01	35	2917	2732	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391283	GCA_000638775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/775/GCA_000638775.1_Stap_aure_C3865_V1	-	C3865
Staphylococcus aureus C3965	1413483	PRJNA226437	226437	Terrabacteria group	Firmicutes	2.69441	32.9	-	JIZB01	32	2788	2603	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391310	GCA_000638795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/795/GCA_000638795.1_Stap_aure_C3965_V1	-	C3965
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.01978	52.1	-	MLRC01	44	5181	4868	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961927	GCA_001831565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/565/GCA_001831565.1_ASM183156v1	-	CFSAN044866
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.42107	65.6	-	MRJE01	1	4292	4092	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094219	GCA_002131705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/705/GCA_002131705.1_ASM213170v1	-	M0021686-2
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	4.77665	50.5	-	JUBZ01	104	4986	4672	12/7/14	2/23/17	Contig	FDA	SAMN03177676	GCA_000797575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/575/GCA_000797575.1_Escherichia_coli_CVM_N37067PS_v._1.0	26142410	CVM N37067PS
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05152	39.6	-	FYWU01	68	2234	2014	6/25/17	7/5/17	Contig	SC	SAMEA1026410	GCA_900193245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/245/GCA_900193245.1_6486_8_7	-	UoS5133
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.11597	39.5	-	FYXE01	81	2315	2096	6/25/17	7/5/17	Contig	SC	SAMEA1026434	GCA_900193255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/255/GCA_900193255.1_6486_8_9	-	UoS5136
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	4.92081	50.8	-	JUCA01	80	5072	4791	12/7/14	2/23/17	Contig	FDA	SAMN03177675	GCA_000797585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/585/GCA_000797585.1_Escherichia_coli_CVM_N37059PS_v._1.0	26142410	CVM N37059PS
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38637	65.6	-	MRJG01	2	4256	4097	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094221	GCA_002131715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/715/GCA_002131715.1_ASM213171v1	-	M0014906-3
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.02087	52.1	-	MLRA01	48	5182	4872	10/24/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961925	GCA_001831575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/575/GCA_001831575.1_ASM183157v1	-	CFSAN044864
Staphylococcus aureus C4151	1413477	PRJNA226430	226430	Terrabacteria group	Firmicutes	2.75918	32.8	-	JIZA01	23	2858	2683	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391304	GCA_000638815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/815/GCA_000638815.1_Stap_aure_C4151_V1	-	C4151
Staphylococcus aureus C4155	1413471	PRJNA226424	226424	Terrabacteria group	Firmicutes	2.73762	32.9	-	JIYZ01	32	2830	2645	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391298	GCA_000638835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/835/GCA_000638835.1_Stap_aure_C4155_V1	-	C4155
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.01291	51.4	-	MLRE01	74	4972	4600	10/24/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961929	GCA_001831625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/625/GCA_001831625.1_ASM183162v1	-	CFSAN044868
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38758	65.6	-	MRJF01	1	4271	4119	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094220	GCA_002131725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/725/GCA_002131725.1_ASM213172v1	-	M0000956-4
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.0804	50.5	-	JUCP01	154	5376	4996	12/7/14	2/23/17	Contig	FDA	SAMN03177659	GCA_000797595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/595/GCA_000797595.1_Escherichia_coli_CVM_N36225PS_v._1.0	26142410	CVM N36225PS
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.01902	39.7	-	FYWW01	42	2215	1997	6/25/17	7/5/17	Contig	SC	SAMEA1026595	GCA_900193275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/275/GCA_900193275.1_6486_8_13	-	UoS5152
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.0658	39.6	-	FYXD01	48	2275	2058	6/25/17	7/5/17	Contig	SC	SAMEA1026415	GCA_900193285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/285/GCA_900193285.1_6486_8_10	-	UoS5142
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	4.83641	50.7	-	JUCB01	85	4983	4702	12/7/14	2/23/17	Contig	FDA	SAMN03177674	GCA_000797605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/605/GCA_000797605.1_Escherichia_coli_CVM_N36963PS_v._1.0	26142410	CVM N36963PS
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39357	65.6	-	MRJH01	4	4271	4099	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094222	GCA_002131765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/765/GCA_002131765.1_ASM213176v1	-	M0017320-4
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.9337	52.1	-	MLRG01	29	5066	4773	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961932	GCA_001831635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/635/GCA_001831635.1_ASM183163v1	-	CFSAN044870
Staphylococcus aureus C4668	1413457	PRJNA226410	226410	Terrabacteria group	Firmicutes	2.78212	32.9	-	JIYY01	36	2882	2688	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391284	GCA_000638855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/855/GCA_000638855.1_Stap_aure_C4668_V1	-	C4668
Staphylococcus aureus C5086	1413455	PRJNA226408	226408	Terrabacteria group	Firmicutes	2.70927	32.8	-	JIYX01	25	2799	2630	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391282	GCA_000638875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/875/GCA_000638875.1_Stap_aure_C5086_V1	-	C5086
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93399	52.1	-	MLRH01	27	5070	4777	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961933	GCA_001831645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/645/GCA_001831645.1_ASM183164v1	-	CFSAN044871
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39505	65.6	-	MRJI01	2	4272	4124	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094223	GCA_002131785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/785/GCA_002131785.1_ASM213178v1	-	M0003753-2
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.05028	50.6	-	JUCK01	157	5305	4954	12/7/14	2/23/17	Contig	FDA	SAMN03177664	GCA_000797655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/655/GCA_000797655.1_Escherichia_coli_CVM_N36401PS_v._1.0	26142410	CVM N36401PS
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07245	39.7	-	FYXF01	61	2312	2088	6/25/17	7/5/17	Contig	SC	SAMEA1026562	GCA_900193295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/295/GCA_900193295.1_6486_8_14	-	UoS5156
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.02104	39.6	-	FYXA01	46	2224	2005	6/25/17	7/5/17	Contig	SC	SAMEA1026507	GCA_900193305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/305/GCA_900193305.1_6486_8_18	-	UoS5165
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.20379	50.7	-	JUBY01	185	5528	5132	12/7/14	2/25/17	Contig	FDA	SAMN03177680	GCA_000797675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/675/GCA_000797675.1_Escherichia_coli_CVM_N38663PS_v._1.0	26142410	CVM N38663PS
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41817	65.6	-	MRJJ01	3	4301	4119	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094224	GCA_002131805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/805/GCA_002131805.1_ASM213180v1	-	M0017734-6
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93391	52.1	-	MLRJ01	27	5065	4773	10/24/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961935	GCA_001831655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/655/GCA_001831655.1_ASM183165v1	-	CFSAN044873
Staphylococcus aureus C5453	1413480	PRJNA226434	226434	Terrabacteria group	Firmicutes	2.77545	32.8	-	JIYW01	25	2864	2689	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391307	GCA_000638895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/895/GCA_000638895.1_Stap_aure_C5453_V1	-	C5453
Staphylococcus aureus Chi-10	1413549	PRJNA226504	226504	Terrabacteria group	Firmicutes	2.8485	32.8	-	JIYV01	41	2968	2782	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391376	GCA_000638915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/915/GCA_000638915.1_Stap_aure_Chi-10_V1	-	Chi-10
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93456	52.1	-	MLRK01	27	5070	4775	10/24/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961936	GCA_001831705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/705/GCA_001831705.1_ASM183170v1	-	CFSAN044874
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38382	65.6	-	MRJK01	9	4270	4114	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094225	GCA_002131815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/815/GCA_002131815.1_ASM213181v1	-	M0010478-7
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	4.9753	50.7	-	JUBX01	255	5202	4871	12/7/14	2/23/17	Contig	FDA	SAMN03177681	GCA_000797695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/695/GCA_000797695.1_Escherichia_coli_CVM_N38733PS_v._1.0	26142410	CVM N38733PS
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05889	39.5	-	FYXH01	75	2262	2009	6/25/17	7/5/17	Contig	SC	SAMEA1026550	GCA_900193315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/315/GCA_900193315.1_6486_8_15	-	UoS5157
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.95282	39.7	-	FYXG01	43	2145	1932	6/25/17	7/5/17	Contig	SC	SAMEA1026495	GCA_900193335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/335/GCA_900193335.1_6486_8_19	-	UoS5166
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.44688	50.5	-	JUBW01	202	5843	5381	12/7/14	2/23/17	Contig	FDA	SAMN03177682	GCA_000797715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/715/GCA_000797715.1_Escherichia_coli_CVM_N38795PS_v._1.0	26142410	CVM N38795PS
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38639	65.6	-	MRFD01	20	4263	4088	5/11/17	5/23/17	Contig	"CETR, HSPH, Megan Murray, director"	SAMN06094109	GCA_002135065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/065/GCA_002135065.1_ASM213506v1	-	02-R0812
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93355	52.1	-	MLRL01	32	5066	4776	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961937	GCA_001831715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/715/GCA_001831715.1_ASM183171v1	-	CFSAN044875
Staphylococcus aureus Chi-4	1413548	PRJNA226503	226503	Terrabacteria group	Firmicutes	2.81974	32.8	-	JIYU01	35	2928	2741	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391375	GCA_000638935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/935/GCA_000638935.1_Stap_aure_Chi-4_V1	-	Chi-4
Staphylococcus aureus Chi-8	1413550	PRJNA226505	226505	Terrabacteria group	Firmicutes	2.91697	32.8	-	JIYT01	43	3055	2870	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391377	GCA_000638955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/955/GCA_000638955.1_Stap_aure_Chi-8_V1	-	Chi-8
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.9352	52.1	-	MLRM01	29	5074	4776	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961938	GCA_001831725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/725/GCA_001831725.1_ASM183172v1	-	CFSAN044876
Mycobacterium tuberculosis PR08	1315977	PRJNA196391	196391	Terrabacteria group	Actinobacteria	4.24766	65.4	-	AROX01	422	4267	3994	6/12/17	6/14/17	Contig	Universiti Teknologi MARA	SAMN07197331	GCA_002191175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/175/GCA_002191175.1_MTB_TB008_version_1	-	PR08
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.19377	50.5	-	JUDO01	311	5638	5066	12/7/14	2/25/17	Contig	FDA	SAMN03177617	GCA_000797735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/735/GCA_000797735.1_Escherichia_coli_CVM_N33552PS_v._1.0	26142410	CVM N33552PS
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08034	39.6	-	FYXL01	47	2281	2042	6/25/17	7/5/17	Contig	SC	SAMEA1026579	GCA_900193345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/345/GCA_900193345.1_6486_8_21	-	UoS5171
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05477	39.5	-	FYXI01	70	2238	2031	6/25/17	7/5/17	Contig	SC	SAMEA1026594	GCA_900193365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/365/GCA_900193365.1_6486_8_22	-	UoS5173
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.08911	50.6	-	JUDP01	186	5323	4976	12/7/14	2/23/17	Contig	FDA	SAMN03177616	GCA_000797755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/755/GCA_000797755.1_Escherichia_coli_CVM_N33443PS_v._1.0	26142410	CVM N33443PS
Mycobacterium tuberculosis	1773	PRJNA400496	400496	Terrabacteria group	Actinobacteria	4.36532	65.4	-	NWUE01	446	4434	4022	9/29/17	10/2/17	Contig	University of British Columbia	SAMN07664769	GCA_002406255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/406/255/GCA_002406255.1_ASM240625v1	-	H37RvAvG2
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93344	52.1	-	MLRN01	28	5068	4774	10/24/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961939	GCA_001831755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/755/GCA_001831755.1_ASM183175v1	-	CFSAN044877
Staphylococcus aureus DICM09/00997-9HST2	1413577	PRJNA226532	226532	Terrabacteria group	Firmicutes	2.89324	32.9	-	JIYS01	53	3038	2844	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391404	GCA_000638975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/975/GCA_000638975.1_Stap_aure_DICM09_00997-9HST2_V1	-	DICM09/00997-9HST2
Staphylococcus aureus DICM09/01587-13HST	1413580	PRJNA226535	226535	Terrabacteria group	Firmicutes	2.79157	32.8	-	JIYR01	30	2899	2713	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391407	GCA_000638995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/638/995/GCA_000638995.1_Stap_aure_DICM09_01587-13HST_V1	-	DICM09/01587-13HST
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93363	52.1	-	MLRO01	27	5070	4779	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961940	GCA_001831785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/785/GCA_001831785.1_ASM183178v1	-	CFSAN044878
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.05208	50.6	-	JUCY01	116	5121	4838	12/7/14	2/23/17	Contig	FDA	SAMN03177644	GCA_000797775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/775/GCA_000797775.1_Escherichia_coli_CVM_N34322PS_v._1.0	26142410	CVM N34322PS
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09589	39.6	-	FYXV01	51	2308	2077	6/25/17	7/5/17	Contig	SC	SAMEA1026731	GCA_900193495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/495/GCA_900193495.1_6569_7_10	-	UoS5205
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.04518	39.7	-	FYXY01	53	2242	2000	6/25/17	7/5/17	Contig	SC	SAMEA1026629	GCA_900193515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/515/GCA_900193515.1_6569_7_17	-	UoS5226
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	4.82926	50.7	-	JUCT01	156	4944	4598	12/7/14	2/23/17	Contig	FDA	SAMN03177649	GCA_000797795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/795/GCA_000797795.1_Escherichia_coli_CVM_N34562PS_v._1.0	26142410	CVM N34562PS
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93376	52.1	-	MLRP01	27	5070	4775	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961941	GCA_001831795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/795/GCA_001831795.1_ASM183179v1	-	CFSAN044879
Staphylococcus aureus FP_N239	1413439	PRJNA226392	226392	Terrabacteria group	Firmicutes	2.75782	32.9	-	JIYQ01	38	2847	2661	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391266	GCA_000639015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/015/GCA_000639015.1_Stap_aure_FP_N239_V1	-	FP_N239
Staphylococcus aureus FP_N5203 OX	1413440	PRJNA226393	226393	Terrabacteria group	Firmicutes	2.80158	32.9	-	JIYP01	32	2909	2705	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391267	GCA_000639035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/035/GCA_000639035.1_Stap_aure_FP_N5203_OX_V1	-	FP_N5203 OX
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93323	52.1	-	MLRQ01	28	5065	4778	10/24/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961942	GCA_001831805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/805/GCA_001831805.1_ASM183180v1	-	CFSAN044880
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.14408	50.5	-	JUBQ01	217	5340	4954	12/7/14	2/23/17	Contig	FDA	SAMN03177689	GCA_000797815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/815/GCA_000797815.1_Escherichia_coli_CVM_N41556PS_v._1.0	26142410	CVM N41556PS
Mycobacterium tuberculosis	1773	PRJEB14777	335719	Terrabacteria group	Actinobacteria	4.11141	65.3	-	FMDE03	296	4295	3807	8/15/16	6/12/17	Contig	Faculty of medecine and pharmacy RABAT	SAMEA4359166	GCA_900095255.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/095/255/GCA_900095255.3_ASM90009525v3	-	-
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10352	39.5	-	FYYC01	83	2308	2076	6/25/17	7/5/17	Contig	SC	SAMEA1026423	GCA_900193555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/555/GCA_900193555.1_6569_7_20	-	UoS5234
Streptococcus pneumoniae SPN072838	869305	PRJNA50797	50797	Terrabacteria group	Firmicutes	2.05704	39.8	-	CACI01	25	2297	2026	8/3/10	3/9/17	Scaffold	Wellcome Trust Sanger Institute	SAMEA3138308	GCA_000180555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/180/555/GCA_000180555.1_ASM18055v1	24130509	SPN072838
Mycobacterium tuberculosis	1773	PRJEB14778	337932	Terrabacteria group	Actinobacteria	4.34731	65.4	-	FTKO01	292	4472	4006	12/26/16	3/14/17	Contig	Faculty of medecine and pharmacy RABAT	SAMEA4554917	GCA_900155225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/225/GCA_900155225.1_MTB13_Ma	-	MTB13_M
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.05501	50.7	-	JUDE01	122	5281	4990	12/7/14	2/25/17	Contig	FDA	SAMN03177632	GCA_000797835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/835/GCA_000797835.1_Escherichia_coli_CVM_N33804PS_v._1.0	26142410	CVM N33804PS
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93316	52.1	-	MLRR01	27	5065	4779	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961943	GCA_001831835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/835/GCA_001831835.1_ASM183183v1	-	CFSAN044881
Staphylococcus aureus FP_N5208 OX	1413441	PRJNA226394	226394	Terrabacteria group	Firmicutes	2.79657	32.9	-	JIYO01	42	2887	2699	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391268	GCA_000639055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/055/GCA_000639055.1_Stap_aure_FP_N5208_OX_V1	-	FP_N5208 OX
Staphylococcus aureus GD2010-052	1413567	PRJNA226522	226522	Terrabacteria group	Firmicutes	2.8095	32.8	-	JIYN01	35	2904	2714	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391394	GCA_000639075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/075/GCA_000639075.1_Stap_aure_GD2010-052_V1	-	GD2010-052
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93308	52.1	-	MLRS01	28	5065	4775	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961944	GCA_001831865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/865/GCA_001831865.1_ASM183186v1	-	CFSAN044882
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.0522	50.7	-	JUDD01	107	5263	4980	12/7/14	2/23/17	Contig	FDA	SAMN03177633	GCA_000797855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/855/GCA_000797855.1_Escherichia_coli_CVM_N33806PS_v._1.0	26142410	CVM N33806PS
Mycobacterium tuberculosis	1773	PRJEB14778	337932	Terrabacteria group	Actinobacteria	4.35896	65.3	-	FUFS01	298	4494	4046	2/6/17	3/15/17	Contig	Faculty of medecine and pharmacy RABAT	SAMEA78793168	GCA_900162635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/635/GCA_900162635.1_MTB20_M	-	-
Streptococcus pneumoniae ECC_3510	1432097	PRJNA229402	229402	Terrabacteria group	Firmicutes	2.12537	39.7	-	JDVZ01	76	2273	1984	10/2/14	3/11/17	Scaffold	Harvard Medical School / Massachusetts Eye and Ear Infirmary	SAMN02428881	GCA_000762425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/425/GCA_000762425.1_EC_3510.v1.0	-	ECC_3510
Streptococcus pneumoniae	1313	PRJNA229402	229402	Terrabacteria group	Firmicutes	2.13092	39.6	-	JFJA01	73	2267	2008	10/2/14	3/10/17	Scaffold	Harvard Medical School / Massachusetts Eye and Ear Infirmary	SAMN02641107	GCA_000762445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/445/GCA_000762445.1_Sp_3504.v1.0	-	ECC_3504
Mycobacterium tuberculosis	1773	PRJEB14776	336150	Terrabacteria group	Actinobacteria	4.06424	65.4	-	FUFR01	285	4280	3705	2/6/17	3/15/17	Contig	Faculty of medecine and pharmacy RABAT	SAMEA4358966	GCA_900162655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/162/655/GCA_900162655.1_MTB1_Ma	-	MTB1_M
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.00857	50.5	-	JUBT01	197	5234	4853	12/7/14	2/23/17	Contig	FDA	SAMN03177686	GCA_000797875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/875/GCA_000797875.1_Escherichia_coli_CVM_N38833PS_v._1.0	26142410	CVM N38833PS
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.83737	52.1	-	MLRT01	27	4914	4648	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961945	GCA_001831875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/875/GCA_001831875.1_ASM183187v1	-	CFSAN044883
Staphylococcus aureus GD2010-061	1413568	PRJNA226523	226523	Terrabacteria group	Firmicutes	2.76148	32.9	-	JIYM01	33	2866	2680	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391395	GCA_000639095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/095/GCA_000639095.1_Stap_aure_GD2010-061_V1	-	GD2010-061
Staphylococcus aureus GD2010-090	1413526	PRJNA226481	226481	Terrabacteria group	Firmicutes	2.78018	32.9	-	JIYL01	48	2903	2714	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391353	GCA_000639115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/115/GCA_000639115.1_Stap_aure_GD2010-090_V1	-	GD2010-090
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.83807	52.1	-	MLRU01	28	4912	4643	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961946	GCA_001831895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/895/GCA_001831895.1_ASM183189v1	-	CFSAN044884
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.28199	50.8	-	JUBS01	135	5549	5215	12/7/14	2/23/17	Contig	FDA	SAMN03177687	GCA_000797895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/895/GCA_000797895.1_Escherichia_coli_CVM_N38834PS_v._1.0	26142410	CVM N38834PS
Mycobacterium tuberculosis	1773	PRJEB19999	386652	Terrabacteria group	Actinobacteria	4.3402	65.4	-	FWEP01	401	4316	4036	5/15/17	5/24/17	Contig	Kalmar county hospital	SAMEA103911212	GCA_900169575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/575/GCA_900169575.1_IonXpress_026	-	-
Streptococcus pneumoniae	1313	PRJNA229402	229402	Terrabacteria group	Firmicutes	2.13324	39.7	-	JFJD01	107	2287	2020	10/2/14	3/10/17	Scaffold	Harvard Medical School / Massachusetts Eye and Ear Infirmary	SAMN02641108	GCA_000762465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/465/GCA_000762465.1_Sp_3517.v1.0	-	ECC_3517
Streptococcus pneumoniae	1313	PRJNA229402	229402	Terrabacteria group	Firmicutes	2.02861	39.6	-	JFJJ01	56	2185	1993	10/2/14	3/10/17	Scaffold	Harvard Medical School / Massachusetts Eye and Ear Infirmary	SAMN02641110	GCA_000762485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/762/485/GCA_000762485.1_Sp_3526.v1.0	-	SC_3526
Mycobacterium tuberculosis	1773	PRJEB19999	386652	Terrabacteria group	Actinobacteria	4.32812	65.4	-	FWDU01	359	4316	4042	5/15/17	5/24/17	Contig	Kalmar county hospital	SAMEA103911213	GCA_900169585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/585/GCA_900169585.1_IonXpress_027	-	-
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.24769	50.6	-	JUBR01	255	5547	5144	12/7/14	2/23/17	Contig	FDA	SAMN03177688	GCA_000797915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/915/GCA_000797915.1_Escherichia_coli_CVM_N41498PS_v._1.0	26142410	CVM N41498PS
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.83924	52.1	-	MLRV01	28	4916	4644	10/24/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961947	GCA_001831915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/915/GCA_001831915.1_ASM183191v1	-	CFSAN044885
Staphylococcus aureus GD2010-102	1413569	PRJNA226524	226524	Terrabacteria group	Firmicutes	2.77245	32.9	-	JIYK01	41	2876	2679	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391396	GCA_000639135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/135/GCA_000639135.1_Stap_aure_GD2010-102_V1	-	GD2010-102
Staphylococcus aureus GD2010-107	1413528	PRJNA226483	226483	Terrabacteria group	Firmicutes	2.75592	32.8	-	JIYJ01	31	2859	2673	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391355	GCA_000639155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/155/GCA_000639155.1_Stap_aure_GD2010-107_V1	-	GD2010-107
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.66117	52.3	-	MLRW01	25	4705	4500	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961948	GCA_001831945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/945/GCA_001831945.1_ASM183194v1	-	CFSAN044886
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.02538	50.6	-	JUCM01	91	5224	4932	12/7/14	2/23/17	Contig	FDA	SAMN03177662	GCA_000797935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/935/GCA_000797935.1_Escherichia_coli_CVM_N36396PS_v._1.0	26142410	CVM N36396PS
Mycobacterium tuberculosis	1773	PRJEB19999	386652	Terrabacteria group	Actinobacteria	4.33346	65.4	-	FWEM01	387	4294	4014	5/15/17	5/24/17	Contig	Kalmar county hospital	SAMEA103911211	GCA_900169655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/655/GCA_900169655.1_IonXpress_025	-	-
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04741	39.6	-	CDQF01	83	2240	2016	1/29/15	3/4/17	Scaffold	SC	SAMEA1023830	GCA_000941155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/155/GCA_000941155.1_6714_8_11	-	SMRU563
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07723	39.4	-	CDQE01	145	2290	2073	1/29/15	3/11/17	Scaffold	SC	SAMEA1023843	GCA_000944255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/255/GCA_000944255.1_6714_8_10	-	SMRU562
Mycobacterium tuberculosis	1773	PRJEB19999	386652	Terrabacteria group	Actinobacteria	4.34468	65.4	-	FWEO01	390	4302	4014	5/15/17	6/15/17	Contig	Kalmar county hospital	SAMEA103911214	GCA_900169765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/765/GCA_900169765.1_IonXpress_028	-	-
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.01327	50.6	-	JUCL01	103	5225	4943	12/7/14	2/23/17	Contig	FDA	SAMN03177663	GCA_000797955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/955/GCA_000797955.1_Escherichia_coli_CVM_N36400PS_v._1.0	26142410	CVM N36400PS
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.66216	52.3	-	MLRX01	25	4709	4495	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961949	GCA_001831965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/965/GCA_001831965.1_ASM183196v1	-	CFSAN044887
Staphylococcus aureus GD2010-110	1413527	PRJNA226482	226482	Terrabacteria group	Firmicutes	2.79962	32.8	-	JIYI01	35	2917	2718	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391354	GCA_000639175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/175/GCA_000639175.1_Stap_aure_GD2010-110_V1	-	GD2010-110
Staphylococcus aureus GD2010-112	1413530	PRJNA226485	226485	Terrabacteria group	Firmicutes	2.77267	32.9	-	JIYH01	42	2885	2682	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391357	GCA_000639195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/195/GCA_000639195.1_Stap_aure_GD2010-112_V1	-	GD2010-112
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.97935	52.1	-	MLRY01	72	5104	4794	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961950	GCA_001831985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/985/GCA_001831985.1_ASM183198v1	-	CFSAN044888
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	4.7069	50.8	-	JUCI01	93	4811	4544	12/7/14	2/23/17	Contig	FDA	SAMN03177667	GCA_000797975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/975/GCA_000797975.1_Escherichia_coli_CVM_N36609PS_v._1.0	26142410	CVM N36609PS
Mycobacterium tuberculosis	1773	PRJEB19999	386652	Terrabacteria group	Actinobacteria	4.32326	65.4	-	FWYL01	363	4297	3993	5/15/17	5/24/17	Contig	Kalmar county hospital	SAMEA103911217	GCA_900169795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/795/GCA_900169795.1_IonXpress_031	-	-
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.17198	39.5	-	CDQD01	88	2401	2167	1/29/15	3/10/17	Scaffold	SC	SAMEA1023791	GCA_000946895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/895/GCA_000946895.1_6714_8_9	-	SMRU561
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.16285	39.7	-	CDQA01	167	2304	2052	1/29/15	3/10/17	Scaffold	SC	SAMEA1023798	GCA_000947295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/295/GCA_000947295.1_6714_8_7	-	SMRU559
Mycobacterium tuberculosis	1773	PRJEB19999	386652	Terrabacteria group	Actinobacteria	4.31422	65.4	-	FWET01	421	4280	3954	5/15/17	5/24/17	Contig	Kalmar county hospital	SAMEA103911216	GCA_900169815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/815/GCA_900169815.1_IonXpress_030	-	-
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	4.87836	50.8	-	JUCH01	149	5052	4744	12/7/14	2/23/17	Contig	FDA	SAMN03177668	GCA_000797995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/995/GCA_000797995.1_Escherichia_coli_CVM_N36613PS_v._1.0	26142410	CVM N36613PS
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.98103	52.1	-	MLRZ01	74	5104	4793	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961951	GCA_001831995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/831/995/GCA_001831995.1_ASM183199v1	-	CFSAN044889
Staphylococcus aureus GD2010-115	1413529	PRJNA226484	226484	Terrabacteria group	Firmicutes	2.77847	32.9	-	JIYG01	43	2883	2684	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391356	GCA_000639215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/215/GCA_000639215.1_Stap_aure_GD2010-115_V1	-	GD2010-115
Staphylococcus aureus GD2010-131	1413531	PRJNA226486	226486	Terrabacteria group	Firmicutes	2.84384	32.9	-	JIYF01	54	2962	2770	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391358	GCA_000639235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/235/GCA_000639235.1_Stap_aure_GD2010-131_V1	-	GD2010-131
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.66125	52.3	-	MLSA01	25	4709	4492	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961952	GCA_001832025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/025/GCA_001832025.1_ASM183202v1	-	CFSAN044890
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	4.94713	50.7	-	JUCX01	182	5161	4842	12/7/14	2/23/17	Contig	FDA	SAMN03177645	GCA_000798015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/015/GCA_000798015.1_Escherichia_coli_CVM_N34351PS_v._1.0	26142410	CVM N34351PS
Mycobacterium tuberculosis	1773	PRJEB19999	386652	Terrabacteria group	Actinobacteria	4.33422	65.4	-	FWEA01	350	4323	3993	5/15/17	5/24/17	Contig	Kalmar county hospital	SAMEA103911215	GCA_900169865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/865/GCA_900169865.1_IonXpress_029	-	-
Streptococcus pneumoniae	1313	PRJNA282904	282904	Terrabacteria group	Firmicutes	2.04027	39.7	-	LCSJ01	88	2240	2006	5/8/15	3/4/17	Scaffold	The Chinese University of Hong Kong	SAMN03580777	GCA_001005565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/565/GCA_001005565.1_ASM100556v1	26067956	CU_SPNE32_06
Streptococcus pneumoniae	1313	PRJNA282904	282904	Terrabacteria group	Firmicutes	2.03815	39.7	-	LCSI01	68	2227	2005	5/8/15	3/4/17	Scaffold	The Chinese University of Hong Kong	SAMN03580776	GCA_001005575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/575/GCA_001005575.1_ASM100557v1	26067956	CU_SPNE1_05
Mycobacterium tuberculosis	1773	PRJEB19999	386652	Terrabacteria group	Actinobacteria	4.34995	65.4	-	FWEE01	380	4323	4037	5/15/17	5/24/17	Contig	Kalmar county hospital	SAMEA103911218	GCA_900169965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/965/GCA_900169965.1_IonXpress_033	-	-
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.16439	50.7	-	JUCW01	227	5356	4991	12/7/14	2/23/17	Contig	FDA	SAMN03177646	GCA_000798035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/035/GCA_000798035.1_Escherichia_coli_CVM_N34352PS_v._1.0	26142410	CVM N34352PS
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.01692	52.1	-	MLSB01	59	5161	4854	10/24/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961953	GCA_001832045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/045/GCA_001832045.1_ASM183204v1	-	CFSAN044891
Staphylococcus aureus GD2010-147	1413532	PRJNA226487	226487	Terrabacteria group	Firmicutes	2.78278	32.8	-	JIYE01	29	2898	2719	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391359	GCA_000639255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/255/GCA_000639255.1_Stap_aure_GD2010-147_V1	-	GD2010-147
Staphylococcus aureus GD2010-155	1413533	PRJNA226488	226488	Terrabacteria group	Firmicutes	2.77014	32.8	-	JIYD01	24	2879	2689	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391360	GCA_000639275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/275/GCA_000639275.1_Stap_aure_GD2010-155_V1	-	GD2010-155
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.02054	52.1	-	MLSC01	74	5174	4857	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961954	GCA_001832065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/065/GCA_001832065.1_ASM183206v1	-	CFSAN044892
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.04886	50.5	-	JUDB01	138	5286	4960	12/7/14	2/23/17	Contig	FDA	SAMN03177637	GCA_000798055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/055/GCA_000798055.1_Escherichia_coli_CVM_N33922PS_v._1.0	26142410	CVM N33922PS
Mycobacterium tuberculosis	1773	PRJEB19999	386652	Terrabacteria group	Actinobacteria	4.32213	65.4	-	FWED01	379	4293	4012	5/15/17	5/24/17	Contig	Kalmar county hospital	SAMEA103911210	GCA_900169985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/985/GCA_900169985.1_IonXpress_024	-	-
Streptococcus pneumoniae	1313	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.12274	39.7	-	JVRJ01	106	2307	2060	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197363	GCA_001071595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/071/595/GCA_001071595.1_ASM107159v1	26230489	172_SPNE
Streptococcus pneumoniae	1313	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.05238	39.7	-	JVLN01	129	2202	2010	7/10/15	3/11/17	Scaffold	University of Washington	SAMN03197515	GCA_001072305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/305/GCA_001072305.1_ASM107230v1	26230489	325_SPNE
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.37216	65.6	-	CHZC01	87	4298	4126	4/21/15	3/10/17	Scaffold	SC	SAMEA1523354	GCA_000982795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/795/GCA_000982795.1_8080_8_14	-	201366
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.10437	50.6	-	JUDC01	143	5388	5011	12/7/14	2/23/17	Contig	FDA	SAMN03177635	GCA_000798075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/075/GCA_000798075.1_Escherichia_coli_CVM_N33849PS_v._1.0	26142410	CVM N33849PS
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93377	52.1	-	MLRF01	28	5070	4772	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961931	GCA_001832075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/075/GCA_001832075.1_ASM183207v1	-	CFSAN044869
Staphylococcus aureus GD2010-158	1413534	PRJNA226489	226489	Terrabacteria group	Firmicutes	2.78658	32.9	-	JIYC01	33	2893	2705	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391361	GCA_000639295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/295/GCA_000639295.1_Stap_aure_GD2010-158_V1	-	GD2010-158
Staphylococcus aureus GD2010-168	1413537	PRJNA226492	226492	Terrabacteria group	Firmicutes	2.71141	32.8	-	JIYA01	41	2789	2607	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391364	GCA_000639315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/315/GCA_000639315.1_Stap_aure_GD2010-168_V1	-	GD2010-168
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93442	52.1	-	MLRI01	29	5067	4775	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961934	GCA_001832095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/095/GCA_001832095.1_ASM183209v1	-	CFSAN044872
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	4.74899	50.9	-	JUCO01	141	4953	4639	12/7/14	2/23/17	Contig	FDA	SAMN03177660	GCA_000798095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/095/GCA_000798095.1_Escherichia_coli_CVM_N36312PS_v._1.0	26142410	CVM N36312PS
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36227	65.6	-	CQDO01	95	4278	4093	3/23/15	3/11/17	Scaffold	SC	SAMEA1317617	GCA_001083085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/085/GCA_001083085.1_7414_6_55	-	400834
Streptococcus pneumoniae	1313	PRJNA267549	267549	Terrabacteria group	Firmicutes	1.93627	39.8	-	JVKG01	270	2073	1901	7/10/15	3/11/17	Scaffold	University of Washington	SAMN03197548	GCA_001072515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/072/515/GCA_001072515.1_ASM107251v1	26230489	358_SPNE
Streptococcus pneumoniae	1313	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.00866	39.8	-	JUSJ01	257	2154	1980	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03198013	GCA_001074475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/475/GCA_001074475.1_ASM107447v1	26230489	80_SPNE
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.29219	65.3	-	CQGD01	224	4325	3962	3/23/15	3/10/17	Scaffold	SC	SAMEA787748	GCA_001084845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/845/GCA_001084845.1_6280_6_11	-	A70250
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.29494	50.4	-	JUCN01	290	5735	5264	12/7/14	2/25/17	Contig	FDA	SAMN03177661	GCA_000798115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/115/GCA_000798115.1_Escherichia_coli_CVM_N36393PS_v._1.0	26142410	CVM N36393PS
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.02124	52.1	-	MLSE01	71	5170	4858	10/24/16	3/1/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961956	GCA_001832125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/125/GCA_001832125.1_ASM183212v1	-	CFSAN044894
Staphylococcus aureus GD2010-177	1413525	PRJNA226480	226480	Terrabacteria group	Firmicutes	2.77281	32.9	-	JIXY01	38	2880	2678	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391352	GCA_000639335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/335/GCA_000639335.1_Stap_aure_GD2010-177_V1	-	GD2010-177
Staphylococcus aureus M118-B	1413323	PRJNA226276	226276	Terrabacteria group	Firmicutes	2.78691	32.9	-	JIXX01	33	2909	2730	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391150	GCA_000639355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/355/GCA_000639355.1_Stap_aure_M118-B_V1	-	M118-B
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.01813	52.1	-	MLSF01	76	5175	4849	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961957	GCA_001832145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/145/GCA_001832145.1_ASM183214v1	-	CFSAN044895
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	4.9413	50.7	-	JUDA01	253	5126	4757	12/7/14	2/25/17	Contig	FDA	SAMN03177639	GCA_000798135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/135/GCA_000798135.1_Escherichia_coli_CVM_N34054PS_v._1.0	26142410	CVM N34054PS
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36116	65.6	-	CPXQ01	104	4284	4090	3/23/15	3/11/17	Scaffold	SC	SAMEA1317655	GCA_001085125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/125/GCA_001085125.1_7414_6_62	-	402495
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10011	39.7	-	CDPV01	149	2231	2014	3/21/15	3/10/17	Scaffold	SC	SAMEA1023722	GCA_001078685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/685/GCA_001078685.1_6714_8_3	-	SMRU555
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.03688	39.7	-	CLUD01	63	2241	2025	3/21/15	3/11/17	Scaffold	SC	SAMEA1028738	GCA_001083125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/125/GCA_001083125.1_6972_5_8	-	SMRU2624
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.37229	65.6	-	CPZD01	77	4297	4128	3/22/15	3/11/17	Scaffold	SC	SAMEA1523385	GCA_001086985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/985/GCA_001086985.1_8080_8_12	-	201314
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	4.84783	50.7	-	JUCZ01	98	5001	4716	12/7/14	2/23/17	Contig	FDA	SAMN03177640	GCA_000798155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/155/GCA_000798155.1_Escherichia_coli_CVM_N34077PS_v._1.0	26142410	CVM N34077PS
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.02031	52.1	-	MLSG01	74	5174	4857	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961958	GCA_001832165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/165/GCA_001832165.1_ASM183216v1	-	CFSAN044896
Staphylococcus aureus M267-1	1413442	PRJNA226395	226395	Terrabacteria group	Firmicutes	2.77869	32.9	-	JIXW01	23	2885	2707	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391269	GCA_000639375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/375/GCA_000639375.1_Stap_aure_M267-1_V1	-	M267-1
Staphylococcus aureus M357	1413443	PRJNA226396	226396	Terrabacteria group	Firmicutes	2.72824	32.9	-	JIXV01	29	2828	2659	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391270	GCA_000639395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/395/GCA_000639395.1_Stap_aure_M357_V1	-	M357
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93395	52.1	-	MLSH01	27	5067	4774	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961959	GCA_001832175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/175/GCA_001832175.1_ASM183217v1	-	CFSAN044897
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.06749	50.8	-	JUBP01	156	5319	4971	12/7/14	2/25/17	Contig	FDA	SAMN03177690	GCA_000798175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/175/GCA_000798175.1_Escherichia_coli_CVM_N41586PS_v._1.0	26142410	CVM N41586PS
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.35448	65.6	-	CPWR01	107	4290	4081	3/23/15	3/10/17	Scaffold	SC	SAMEA1317641	GCA_001088225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/225/GCA_001088225.1_7414_6_19	-	300191
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.1086	39.6	-	CLMP01	50	2321	2045	3/21/15	3/11/17	Scaffold	SC	SAMEA1028832	GCA_001083205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/205/GCA_001083205.1_6938_7_16	-	SMRU2704
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.2247	39.5	-	CPLU01	90	2472	2216	3/22/15	3/11/17	Scaffold	SC	SAMEA1408227	GCA_001083225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/225/GCA_001083225.1_7444_8_91	-	0107+17127
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.27234	65.3	-	CQFW01	278	4346	3937	3/23/15	3/11/17	Scaffold	SC	SAMEA787732	GCA_001088285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/285/GCA_001088285.1_6280_8_7	-	A70490
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.21618	50.5	-	JUDF01	279	5536	5063	12/7/14	2/23/17	Contig	FDA	SAMN03177631	GCA_000798195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/195/GCA_000798195.1_Escherichia_coli_CVM_N33742PS_v._1.0	26142410	CVM N33742PS
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93717	52.1	-	MLYY01	36	5072	4772	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961966	GCA_001832205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/205/GCA_001832205.1_ASM183220v1	-	CFSAN044899
Staphylococcus aureus M457-1	1413444	PRJNA226397	226397	Terrabacteria group	Firmicutes	2.72675	32.9	-	JIXU01	28	2828	2646	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391271	GCA_000639415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/415/GCA_000639415.1_Stap_aure_M457-1_V1	-	M457-1
Staphylococcus aureus M520-1	1413445	PRJNA226398	226398	Terrabacteria group	Firmicutes	2.78615	32.9	-	JIXT01	35	2888	2695	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391272	GCA_000639435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/435/GCA_000639435.1_Stap_aure_M520-1_V1	-	M520-1
Salmonella enterica subsp. diarizonae serovar 38:[k]:-	1911136	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93358	52.1	-	MLYZ01	29	5069	4778	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961975	GCA_001832225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/225/GCA_001832225.1_ASM183222v1	-	CFSAN044908
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	4.88037	50.8	-	JUCG01	105	5046	4743	12/7/14	2/23/17	Contig	FDA	SAMN03177669	GCA_000798215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/215/GCA_000798215.1_Escherichia_coli_CVM_N36620PS_v._1.0	26142410	CVM N36620PS
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.35807	65.6	-	CPYT01	70	4273	4092	3/23/15	3/10/17	Scaffold	SC	SAMEA1317637	GCA_001088465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/465/GCA_001088465.1_7414_6_17	-	401555
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11684	39.7	-	CMLB01	67	2358	2117	3/23/15	3/11/17	Scaffold	SC	SAMEA1029308	GCA_001083245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/245/GCA_001083245.1_7054_5_21	-	SMRU3069
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.10429	39.7	-	CMOM01	50	2337	2109	3/23/15	3/11/17	Scaffold	SC	SAMEA2061486	GCA_001083345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/345/GCA_001083345.1_9803_7_31	-	34
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.29759	65.3	-	CQGC01	230	4332	3960	3/23/15	3/10/17	Scaffold	SC	SAMEA787717	GCA_001090285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/285/GCA_001090285.1_6280_7_5	-	A70329
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.20269	50.6	-	JUCF01	200	5484	5121	12/7/14	2/25/17	Contig	FDA	SAMN03177670	GCA_000798235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/235/GCA_000798235.1_Escherichia_coli_CVM_N36834PS_v._1.0	26142410	CVM N36834PS
Salmonella enterica subsp. diarizonae serovar 38:[k]:-	1911136	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93443	52.1	-	MLXP01	32	5071	4767	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961987	GCA_001832245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/245/GCA_001832245.1_ASM183224v1	-	CFSAN044920
Staphylococcus aureus MRSA-118	1413495	PRJNA226450	226450	Terrabacteria group	Firmicutes	2.82944	32.8	-	JIXS01	27	2975	2768	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391322	GCA_000639455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/455/GCA_000639455.1_Stap_aure_MRSA-118_V1	-	MRSA-118
Staphylococcus aureus MRSA-136	1413497	PRJNA226452	226452	Terrabacteria group	Firmicutes	2.84782	32.8	-	JIXR01	48	3009	2793	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391324	GCA_000639475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/475/GCA_000639475.1_Stap_aure_MRSA-136_V1	-	MRSA-136
"Salmonella enterica subsp. diarizonae serovar 60:r:e,n,x,z15"	1173779	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.11636	51.4	-	MLXQ01	64	5126	4756	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961990	GCA_001832255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/255/GCA_001832255.1_ASM183225v1	-	CFSAN044923
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	4.84048	50.5	-	JUCS01	194	5098	4672	12/7/14	2/23/17	Contig	FDA	SAMN03177653	GCA_000798255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/255/GCA_000798255.1_Escherichia_coli_CVM_N36093PS_v._1.0	26142410	CVM N36093PS
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.37882	65.6	-	CPWX01	77	4301	4106	3/22/15	3/10/17	Scaffold	SC	SAMEA1317635	GCA_001090305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/305/GCA_001090305.1_9278_1_10	-	301645
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.04092	39.5	-	CLVY01	78	2248	2026	3/21/15	3/11/17	Scaffold	SC	SAMEA1025906	GCA_001083365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/365/GCA_001083365.1_6983_4_87	-	SMRU2295
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08611	39.5	-	CLZX01	55	2297	2049	3/21/15	3/11/17	Scaffold	SC	SAMEA1029115	GCA_001083425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/425/GCA_001083425.1_7004_5_10	-	SMRU2866
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.38964	65.6	-	CQDQ01	97	4316	4093	3/22/15	3/10/17	Scaffold	SC	SAMEA1317675	GCA_001090405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/405/GCA_001090405.1_7414_6_40	-	401107
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	4.97659	50.6	-	JUDK01	83	5117	4827	12/7/14	2/23/17	Contig	FDA	SAMN03177624	GCA_000798275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/275/GCA_000798275.1_Escherichia_coli_CVM_N33640PS_v._1.0	26142410	CVM N33640PS
Salmonella enterica subsp. diarizonae serovar 38:[k]:-	1911136	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93466	52.1	-	MLXR01	29	5074	4779	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962019	GCA_001832285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/285/GCA_001832285.1_ASM183228v1	-	CFSAN044946
Staphylococcus aureus MSSA-93	1413492	PRJNA226446	226446	Terrabacteria group	Firmicutes	2.76817	32.9	-	JIXN01	39	2890	2705	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391319	GCA_000639495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/495/GCA_000639495.1_Stap_aure_MSSA-93_V1	-	MSSA-93
Staphylococcus aureus N0426	1413498	PRJNA226453	226453	Terrabacteria group	Firmicutes	2.84296	32.9	-	JIXM01	36	2960	2777	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391325	GCA_000639515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/515/GCA_000639515.1_Stap_aure_N0426_V1	-	N0426
Salmonella enterica subsp. diarizonae serovar 38:[k]:-	1911136	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93462	52.1	-	MLXS01	32	5070	4773	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962020	GCA_001832305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/305/GCA_001832305.1_ASM183230v1	-	CFSAN044947
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	4.941	50.3	-	JUDJ01	147	5197	4825	12/7/14	2/25/17	Contig	FDA	SAMN03177625	GCA_000798295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/295/GCA_000798295.1_Escherichia_coli_CVM_N33651PS_v._1.0	26142410	CVM N33651PS
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.26636	64.8	-	CQFD01	217	4459	3858	3/23/15	3/10/17	Scaffold	SC	SAMEA787743	GCA_001091605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/605/GCA_001091605.1_6280_6_6	-	A70011_4
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11063	39.7	-	CMHC01	77	2304	2101	3/23/15	3/4/17	Scaffold	SC	SAMEA1029260	GCA_001083445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/445/GCA_001083445.1_7038_5_20	-	SMRU2972
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	1.96222	39.8	-	CKQL01	37	2159	1931	3/21/15	3/6/17	Scaffold	SC	SAMEA1024779	GCA_001083465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/465/GCA_001083465.1_6680_6_19	-	SMRU955
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.3579	65.6	-	CPYW01	80	4276	4086	3/22/15	3/11/17	Scaffold	SC	SAMEA1523377	GCA_001091965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/965/GCA_001091965.1_8080_8_19	-	1200782
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.22086	50.6	-	JUDL01	245	5474	5092	12/7/14	2/25/17	Contig	FDA	SAMN03177623	GCA_000798315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/315/GCA_000798315.1_Escherichia_coli_CVM_N33633PS_v._1.0	26142410	CVM N33633PS
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.20491	52	-	MLZA01	49	5429	5149	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962030	GCA_001832325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/325/GCA_001832325.1_ASM183232v1	-	CFSAN044957
Staphylococcus aureus N1343	1413499	PRJNA226454	226454	Terrabacteria group	Firmicutes	2.70433	32.8	-	JIXL01	36	2799	2613	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391326	GCA_000639535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/535/GCA_000639535.1_Stap_aure_N1343_V1	-	N1343
Staphylococcus aureus P0218	1413512	PRJNA226467	226467	Terrabacteria group	Firmicutes	2.81121	32.9	-	JIXK01	37	2920	2737	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391339	GCA_000639555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/555/GCA_000639555.1_Stap_aure_P0218_V1	-	P0218
"Salmonella enterica subsp. diarizonae serovar 60:r:e,n,x,z15"	1173779	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.11847	51.4	-	MLXT01	65	5125	4756	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962047	GCA_001832335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/335/GCA_001832335.1_ASM183233v1	-	CFSAN044974
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.02501	50.8	-	JUDI01	106	5259	4968	12/7/14	2/25/17	Contig	FDA	SAMN03177627	GCA_000798335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/335/GCA_000798335.1_Escherichia_coli_CVM_N33687PS_v._1.0	26142410	CVM N33687PS
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.38212	65.6	-	CQCJ01	80	4293	4072	3/23/15	3/10/17	Scaffold	SC	SAMEA1317662	GCA_001092505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/505/GCA_001092505.1_7414_6_3	-	300239
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21309	39.6	-	CPML01	107	2460	2207	3/23/15	3/4/17	Scaffold	SC	SAMEA1408254	GCA_001083485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/485/GCA_001083485.1_7444_8_53	-	0106+11154
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.101	39.8	-	CLJB01	43	2314	2106	3/21/15	3/4/17	Scaffold	SC	SAMEA1028717	GCA_001083505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/505/GCA_001083505.1_6925_7_6	-	SMRU2502
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.38905	65.6	-	CPYA01	99	4323	4109	3/22/15	3/10/17	Scaffold	SC	SAMEA1317618	GCA_001093225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/225/GCA_001093225.1_7414_6_13	-	400739
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.51464	50.5	-	JUDH01	299	5953	5470	12/7/14	2/23/17	Contig	FDA	SAMN03177628	GCA_000798355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/355/GCA_000798355.1_Escherichia_coli_CVM_N33707PS_v._1.0	26142410	CVM N33707PS
"Salmonella enterica subsp. diarizonae serovar 60:r:e,n,x,z15"	1173779	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.11711	51.4	-	MLXU01	59	5120	4760	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962055	GCA_001832385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/385/GCA_001832385.1_ASM183238v1	-	CFSAN044982
Staphylococcus aureus PA11	1413489	PRJNA226443	226443	Terrabacteria group	Firmicutes	2.69746	32.8	-	JIXJ01	32	2802	2620	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391316	GCA_000639575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/575/GCA_000639575.1_Stap_aure_PA11_V1	-	PA11
Staphylococcus aureus PA57	1413490	PRJNA226444	226444	Terrabacteria group	Firmicutes	2.71325	32.8	-	JIXI01	30	2815	2629	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391317	GCA_000639595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/595/GCA_000639595.1_Stap_aure_PA57_V1	-	PA57
"Salmonella enterica subsp. diarizonae serovar 60:r:e,n,x,z15"	1173779	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.11815	51.4	-	MLXV01	59	5125	4761	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962089	GCA_001832405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/405/GCA_001832405.1_ASM183240v1	-	CFSAN044987
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.11542	50.8	-	JUBU01	211	5400	5019	12/7/14	2/23/17	Contig	FDA	SAMN03177685	GCA_000798375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/375/GCA_000798375.1_Escherichia_coli_CVM_N38826PS_v._1.0	26142410	CVM N38826PS
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.26958	65.2	-	CQFE01	446	4474	3912	3/23/15	3/11/17	Scaffold	SC	SAMEA787723	GCA_001096245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/245/GCA_001096245.1_6280_8_1	-	A70428
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11196	39.7	-	CMKB01	60	2330	2124	3/23/15	3/4/17	Scaffold	SC	SAMEA1029300	GCA_001083585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/585/GCA_001083585.1_7054_4_16	-	SMRU3040
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.98793	39.8	-	CQQV01	42	2199	1989	3/23/15	3/4/17	Scaffold	SC	SAMEA970221	GCA_001083685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/685/GCA_001083685.1_5159_6_6	-	BHN369
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.25111	65.4	-	CQFO01	202	4288	3966	3/23/15	3/10/17	Scaffold	SC	SAMEA787739	GCA_001096785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/785/GCA_001096785.1_6180_1_1	-	A70555
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.16981	50.5	-	JUCV01	214	5493	5093	12/7/14	2/23/17	Contig	FDA	SAMN03177647	GCA_000798395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/395/GCA_000798395.1_Escherichia_coli_CVM_N34543PS_v._1.0	26142410	CVM N34543PS
"Salmonella enterica subsp. diarizonae serovar 60:r:e,n,x,z15"	1173779	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.11672	51.4	-	MLXX01	61	5117	4756	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962108	GCA_001832425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/425/GCA_001832425.1_ASM183242v1	-	CFSAN045006
Staphylococcus aureus R0294	1413500	PRJNA226455	226455	Terrabacteria group	Firmicutes	2.89049	32.9	-	JIXH01	68	3048	2848	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391327	GCA_000639615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/615/GCA_000639615.1_Stap_aure_R0294_V1	-	R0294
Staphylococcus aureus R0353	1413501	PRJNA226456	226456	Terrabacteria group	Firmicutes	2.8504	32.9	-	JIXG01	48	3007	2807	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391328	GCA_000639635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/635/GCA_000639635.1_Stap_aure_R0353_V1	-	R0353
Salmonella enterica subsp. diarizonae serovar 38:[k]:-	1911136	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93388	52.1	-	MLXZ01	27	5066	4770	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962114	GCA_001832445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/445/GCA_001832445.1_ASM183244v1	-	CFSAN045012
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.1298	50.6	-	JUCU01	151	5279	4941	12/7/14	2/23/17	Contig	FDA	SAMN03177648	GCA_000798415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/415/GCA_000798415.1_Escherichia_coli_CVM_N34557PS_v._1.0	26142410	CVM N34557PS
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.38374	65.6	-	CQAA01	101	4321	4114	3/22/15	3/11/17	Scaffold	SC	SAMEA1317664	GCA_001096945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/945/GCA_001096945.1_7414_6_14	-	402267
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08345	39.4	-	CLAT01	48	2323	2077	3/21/15	3/4/17	Scaffold	SC	SAMEA1025432	GCA_001083725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/725/GCA_001083725.1_6841_7_17	-	SMRU1337
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10072	39.7	-	CKPB01	43	2333	2098	3/21/15	3/4/17	Scaffold	SC	SAMEA1024868	GCA_001083905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/905/GCA_001083905.1_6680_4_6	-	6A
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.25221	65.4	-	CQGF01	187	4288	3970	3/23/15	3/11/17	Scaffold	SC	SAMEA787740	GCA_001097745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/745/GCA_001097745.1_6180_1_2	-	A70582
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	4.98902	50.5	-	JUDG01	107	5227	4886	12/7/14	2/23/17	Contig	FDA	SAMN03177629	GCA_000798435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/435/GCA_000798435.1_Escherichia_coli_CVM_N33719PS_v._1.0	26142410	CVM N33719PS
Salmonella enterica subsp. diarizonae serovar 38:[k]:-	1911136	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93304	52.1	-	MLYA01	26	5068	4776	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962115	GCA_001832465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/465/GCA_001832465.1_ASM183246v1	-	CFSAN045013
Staphylococcus aureus R0357	1413502	PRJNA226457	226457	Terrabacteria group	Firmicutes	2.84105	32.9	-	JIXF01	46	2988	2784	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391329	GCA_000639655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/655/GCA_000639655.1_Stap_aure_R0357_V1	-	R0357
Staphylococcus aureus R0487	1413503	PRJNA226458	226458	Terrabacteria group	Firmicutes	2.83661	32.9	-	JIXE01	47	2986	2777	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391330	GCA_000639675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/675/GCA_000639675.1_Stap_aure_R0487_V1	-	R0487
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.21059	52	-	MLZE01	66	5441	5152	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962116	GCA_001832485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/485/GCA_001832485.1_ASM183248v1	-	CFSAN045014
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	4.94853	50.6	-	JUCR01	142	5087	4762	12/7/14	2/23/17	Contig	FDA	SAMN03177656	GCA_000798455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/455/GCA_000798455.1_Escherichia_coli_CVM_N36158PS_v._1.0	26142410	CVM N36158PS
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36578	65.6	-	CPZN01	81	4267	4091	3/23/15	3/11/17	Scaffold	SC	SAMEA1523387	GCA_001099065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/065/GCA_001099065.1_8080_8_25	-	1300039
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.15348	39.4	-	CMGV01	81	2410	2173	3/23/15	3/4/17	Scaffold	SC	SAMEA1029447	GCA_001083945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/945/GCA_001083945.1_7038_5_10	-	SMRU2962
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.23313	39.5	-	CLOV01	73	2414	2191	3/21/15	3/4/17	Scaffold	SC	SAMEA1028670	GCA_001083965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/965/GCA_001083965.1_6949_2_19	-	SMRU2443
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.37917	65.6	-	CQBD01	92	4274	4102	3/23/15	3/10/17	Scaffold	SC	SAMEA1523371	GCA_001099745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/745/GCA_001099745.1_8080_8_30	-	1500108
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	4.91824	50.6	-	JUCQ01	105	5054	4773	12/7/14	2/23/17	Contig	FDA	SAMN03177657	GCA_000798475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/475/GCA_000798475.1_Escherichia_coli_CVM_N36204PS_v._1.0	26142410	CVM N36204PS
"Salmonella enterica subsp. diarizonae serovar 60:r:e,n,x,z15"	1173779	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.06432	51.4	-	MLYB01	54	5046	4682	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962117	GCA_001832505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/505/GCA_001832505.1_ASM183250v1	-	CFSAN045015
Staphylococcus aureus R0545	1413504	PRJNA226459	226459	Terrabacteria group	Firmicutes	2.82694	32.8	-	JIXD01	58	2962	2759	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391331	GCA_000639695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/695/GCA_000639695.1_Stap_aure_R0545_V1	-	R0545
Staphylococcus aureus R0611	1413505	PRJNA226460	226460	Terrabacteria group	Firmicutes	2.8335	32.9	-	JIXC01	52	2988	2784	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391332	GCA_000639715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/715/GCA_000639715.1_Stap_aure_R0611_V1	-	R0611
Salmonella enterica subsp. diarizonae serovar 38:[k]:-	1911136	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93467	52.1	-	MLYC01	28	5068	4773	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962120	GCA_001832525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/525/GCA_001832525.1_ASM183252v1	-	CFSAN045018
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.00689	50.6	-	JUCC01	118	5240	4953	12/7/14	2/23/17	Contig	FDA	SAMN03177673	GCA_000798495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/495/GCA_000798495.1_Escherichia_coli_CVM_N36918PS_v._1.0	26142410	CVM N36918PS
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.26219	65.3	-	CQFI01	405	4425	3921	3/23/15	3/10/17	Scaffold	SC	SAMEA787731	GCA_001099945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/945/GCA_001099945.1_6280_8_8	-	A70501
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09631	39.5	-	CLBF01	56	2313	2090	3/21/15	3/4/17	Scaffold	SC	SAMEA1025554	GCA_001083985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/985/GCA_001083985.1_6841_7_6	-	SMRU1326
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09557	39.6	-	CMNU01	67	2335	2102	3/23/15	3/11/17	Scaffold	SC	SAMEA2061477	GCA_001084065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/065/GCA_001084065.1_9803_7_16	-	32F
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36011	65.6	-	CQCQ01	104	4290	4081	3/22/15	3/11/17	Scaffold	SC	SAMEA1317638	GCA_001102605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/605/GCA_001102605.1_7414_6_49	-	300260
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.60416	50.3	-	JUDN01	344	6070	5607	12/7/14	2/23/17	Contig	FDA	SAMN03177619	GCA_000798515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/515/GCA_000798515.1_Escherichia_coli_CVM_N33561PS_v._1.0	26142410	CVM N33561PS
Salmonella enterica subsp. enterica serovar Rubislaw	598	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.98396	52.1	-	MLZF01	49	5114	4826	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962144	GCA_001832545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/545/GCA_001832545.1_ASM183254v1	-	CFSAN045022
Staphylococcus aureus R0615	1413506	PRJNA226461	226461	Terrabacteria group	Firmicutes	2.87409	32.8	-	JIXB01	55	3040	2819	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391333	GCA_000639735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/735/GCA_000639735.1_Stap_aure_R0615_V1	-	R0615
Staphylococcus aureus Rd.3	1413538	PRJNA226493	226493	Terrabacteria group	Firmicutes	2.75699	32.8	-	JIWZ01	43	2864	2663	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391365	GCA_000639755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/755/GCA_000639755.1_Stap_aure_Rd_3_V1	-	Rd.3
"Salmonella enterica subsp. diarizonae serovar 60:r:e,n,x,z15"	1173779	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.10015	51.5	-	MLYF01	57	5084	4714	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962152	GCA_001832565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/565/GCA_001832565.1_ASM183256v1	-	CFSAN045030
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	4.46433	50.7	-	JUCE01	145	4598	4263	12/7/14	2/23/17	Contig	FDA	SAMN03177671	GCA_000798535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/535/GCA_000798535.1_Escherichia_coli_CVM_N36837PS_v._1.0	26142410	CVM N36837PS
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36687	65.6	-	CQCD01	108	4301	4097	3/22/15	3/10/17	Scaffold	SC	SAMEA1523380	GCA_001102685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/685/GCA_001102685.1_8080_8_17	-	200066
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.11276	39.6	-	CLIR01	64	2343	2108	3/21/15	3/11/17	Scaffold	SC	SAMEA1028672	GCA_001084105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/105/GCA_001084105.1_6925_7_13	-	SMRU2509
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08882	39.7	-	CLSQ01	69	2297	2073	3/21/15	3/11/17	Scaffold	SC	SAMEA1028895	GCA_001084185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/185/GCA_001084185.1_6972_4_12	-	21
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36012	65.6	-	CPZH01	78	4276	4095	3/22/15	3/11/17	Scaffold	SC	SAMEA1317627	GCA_001102705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/705/GCA_001102705.1_7414_6_18	-	402542
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.02016	50.6	-	JUCD01	111	5222	4919	12/7/14	2/23/17	Contig	FDA	SAMN03177672	GCA_000798555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/555/GCA_000798555.1_Escherichia_coli_CVM_N36903PS_v._1.0	26142410	CVM N36903PS
Salmonella enterica subsp. diarizonae serovar 38:[k]:-	1911136	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93377	52.1	-	MLYG01	27	5066	4774	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962157	GCA_001832585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/585/GCA_001832585.1_ASM183258v1	-	CFSAN045035
Staphylococcus aureus Rd.40	1413540	PRJNA226495	226495	Terrabacteria group	Firmicutes	2.77336	32.8	-	JIWY01	30	2878	2699	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391367	GCA_000639775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/775/GCA_000639775.1_Stap_aure_Rd_40_V1	-	Rd.40
Staphylococcus aureus Rd.51	1413541	PRJNA226496	226496	Terrabacteria group	Firmicutes	2.79834	32.9	-	JIWX01	29	2892	2706	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391368	GCA_000639795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/795/GCA_000639795.1_Stap_aure_Rd_51_V1	-	Rd.51
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70642	52.2	-	MLZH01	47	4777	4518	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962154	GCA_001832595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/595/GCA_001832595.1_ASM183259v1	-	CFSAN045032
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.00645	50.7	-	JUCJ01	89	5202	4912	12/7/14	2/23/17	Contig	FDA	SAMN03177665	GCA_000798575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/575/GCA_000798575.1_Escherichia_coli_CVM_N36404PS_v._1.0	26142410	CVM N36404PS
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.30346	65.4	-	CQFQ01	209	4349	4043	3/22/15	3/10/17	Scaffold	SC	SAMEA787741	GCA_001103285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/285/GCA_001103285.1_6180_1_3	-	A70596
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.04737	39.7	-	CLZJ01	37	2257	2038	3/21/15	3/11/17	Scaffold	SC	SAMEA1028887	GCA_001084285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/285/GCA_001084285.1_6983_8_82	-	SMRU2386
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.27511	39.7	-	CKCE01	54	2541	2286	3/21/15	3/11/17	Scaffold	SC	SAMEA1023821	GCA_001084305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/305/GCA_001084305.1_6593_4_17	-	23A
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36657	65.6	-	CQCU01	96	4293	4093	3/22/15	3/10/17	Scaffold	SC	SAMEA1523359	GCA_001103985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/985/GCA_001103985.1_8080_8_35	-	1700089
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	4.90204	50.7	-	JUDM01	82	5073	4813	12/7/14	2/23/17	Contig	FDA	SAMN03177621	GCA_000798595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/798/595/GCA_000798595.1_Escherichia_coli_CVM_N33601PS_v._1.0	26142410	CVM N33601PS
"Salmonella enterica subsp. diarizonae serovar 16:z10:e,n,x,z15"	1911135	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.34838	51.2	-	MLYH01	64	5413	4994	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962158	GCA_001832605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/605/GCA_001832605.1_ASM183260v1	-	CFSAN045036
Staphylococcus aureus Rd.545	1413563	PRJNA226518	226518	Terrabacteria group	Firmicutes	2.87382	32.9	-	JIWW01	44	3014	2830	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391390	GCA_000639815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/815/GCA_000639815.1_Stap_aure_Rd_545_V1	-	Rd.545
Staphylococcus aureus Rd.60	1413542	PRJNA226497	226497	Terrabacteria group	Firmicutes	2.7772	32.8	-	JIWV01	31	2882	2696	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391369	GCA_000639835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/835/GCA_000639835.1_Stap_aure_Rd_60_V1	-	Rd.60
"Salmonella enterica subsp. diarizonae serovar 16:z10:e,n,x,z15"	1911135	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.34787	51.2	-	MLYI01	69	5417	4995	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962160	GCA_001832645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/645/GCA_001832645.1_ASM183264v1	-	CFSAN045038
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.13565	50.5	-	JUBV01	246	5327	4922	12/9/14	2/23/17	Contig	FDA	SAMN03177684	GCA_000800495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/495/GCA_000800495.1_Escherichia_coli_CVM_N38823PS_v._1.0	26142410	CVM N38823PS
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.11309	65	-	CQPQ01	1157	4537	3696	3/22/15	3/11/17	Scaffold	SC	SAMEA968074	GCA_001105365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/365/GCA_001105365.1_4948_5_10	-	B00001265
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09783	39.5	-	CLAR01	61	2318	2059	3/21/15	3/11/17	Scaffold	SC	SAMEA1025662	GCA_001084365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/365/GCA_001084365.1_6841_7_24	-	SMRU1344
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.15315	39.6	-	CLQR01	81	2375	2123	3/21/15	3/11/17	Scaffold	SC	SAMEA1028690	GCA_001084385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/385/GCA_001084385.1_6949_4_7	-	SMRU2479
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.287	64.6	-	CQFH01	385	4553	3798	3/23/15	3/11/17	Scaffold	SC	SAMEA787719	GCA_001105885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/885/GCA_001105885.1_6280_7_7	-	A70136
Escherichia coli	562	PRJNA221787	221787	Proteobacteria	Gammaproteobacteria	4.93834	50.6	-	JTDX01	208	5042	4703	12/10/14	2/25/17	Contig	GlaxoSmithKline	SAMN03169619	GCA_000800675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/800/675/GCA_000800675.1_ASM80067v1	25348524	GSK252BU
Salmonella enterica subsp. diarizonae serovar 38:[k]:-	1911136	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93433	52.1	-	MLYJ01	28	5066	4772	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962163	GCA_001832665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/665/GCA_001832665.1_ASM183266v1	-	CFSAN045041
Staphylococcus aureus Rd.614	1413564	PRJNA226519	226519	Terrabacteria group	Firmicutes	2.85471	32.9	-	JIWU01	32	2985	2807	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391391	GCA_000639855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/855/GCA_000639855.1_Stap_aure_Rd_614_V1	-	Rd.614
Staphylococcus aureus Rd.9	1413539	PRJNA226494	226494	Terrabacteria group	Firmicutes	2.87745	32.9	-	JIWT01	49	3002	2807	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391366	GCA_000639875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/875/GCA_000639875.1_Stap_aure_Rd_9_V1	-	Rd.9
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.02083	52.1	-	MLSD01	74	5166	4856	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961955	GCA_001832675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/675/GCA_001832675.1_ASM183267v1	-	CFSAN044893
Escherichia coli	562	PRJNA269669	269669	Proteobacteria	Gammaproteobacteria	4.73131	50.7	-	JUJY01	220	4849	4526	12/18/14	2/23/17	Contig	University of Malaya	SAMN03256244	GCA_000804325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/325/GCA_000804325.1_ASM80432v1	-	EC12
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.37541	65.6	-	CPVA01	105	4304	4083	3/23/15	3/10/17	Scaffold	SC	SAMEA1523353	GCA_001105945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/945/GCA_001105945.1_8080_8_24	-	1301087
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09871	39.6	-	CLVM01	87	2309	2076	3/21/15	3/11/17	Scaffold	SC	SAMEA1025969	GCA_001084405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/405/GCA_001084405.1_6983_3_72	-	SMRU2280
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.02154	39.6	-	CLKU01	72	2228	1995	3/21/15	3/11/17	Scaffold	SC	SAMEA1029032	GCA_001084545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/545/GCA_001084545.1_6938_5_10	-	SMRU2650
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.25398	65.3	-	CQFF01	441	4411	3919	3/23/15	3/10/17	Scaffold	SC	SAMEA787713	GCA_001106545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/545/GCA_001106545.1_6280_8_3	-	A70448
Escherichia coli	562	PRJNA269669	269669	Proteobacteria	Gammaproteobacteria	4.90805	50.5	-	JUJZ01	178	5172	4841	12/18/14	2/23/17	Contig	University of Malaya	SAMN03256245	GCA_000804345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/345/GCA_000804345.1_ASM80434v1	-	EC13
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.9334	52.1	-	MLSI01	28	5067	4776	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961965	GCA_001832695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/695/GCA_001832695.1_ASM183269v1	-	CFSAN044898
Staphylococcus aureus S56_POEL	1413484	PRJNA226438	226438	Terrabacteria group	Firmicutes	2.85123	32.8	-	JIWS01	68	2990	2781	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391311	GCA_000639895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/895/GCA_000639895.1_Stap_aure_S56_POEL_V1	-	S56_POEL
Staphylococcus aureus S62_POEL	1413485	PRJNA226439	226439	Terrabacteria group	Firmicutes	2.86667	32.9	-	JIWR01	51	3029	2822	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391312	GCA_000639915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/915/GCA_000639915.1_Stap_aure_S62_POEL_V1	-	S62_POEL
Salmonella enterica subsp. diarizonae serovar 59:[k]:z35	1911137	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.37651	51.1	-	MLXO01	91	5450	5023	10/24/16	4/11/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961977	GCA_001832725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/725/GCA_001832725.1_ASM183272v1	-	CFSAN044910
Escherichia coli	562	PRJNA269669	269669	Proteobacteria	Gammaproteobacteria	4.86594	50.6	-	JUKA01	90	4867	4634	12/18/14	2/23/17	Contig	University of Malaya	SAMN03256246	GCA_000804365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/804/365/GCA_000804365.1_ASM80436v1	-	EC14
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36157	65.6	-	CPYB01	84	4279	4083	3/23/15	3/10/17	Scaffold	SC	SAMEA1317660	GCA_001109345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/345/GCA_001109345.1_7414_6_26	-	402138
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.13409	39.6	-	CLXB01	47	2368	2084	3/21/15	3/11/17	Scaffold	SC	SAMEA1029019	GCA_001084565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/565/GCA_001084565.1_6983_5_20	-	SMRU2324
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.16684	39.6	-	CLPH01	45	2370	2152	3/21/15	3/11/17	Scaffold	SC	SAMEA1028833	GCA_001084625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/625/GCA_001084625.1_6949_3_15	-	SMRU2463
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.303	65.4	-	CQFU01	194	4303	3941	3/23/15	3/10/17	Scaffold	SC	SAMEA787716	GCA_001110005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/005/GCA_001110005.1_6280_7_6	-	A70011_5
Escherichia coli	562	PRJNA266798	266798	Proteobacteria	Gammaproteobacteria	5.09393	50.7	-	JTCN01	294	5421	4909	12/19/14	2/23/17	Contig	Food and Drug Administration	SAMN03174510	GCA_000805815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/815/GCA_000805815.1_ASM80581v1	25657266	M4163
Salmonella enterica subsp. enterica serovar Bareilly	58096	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.78528	52	-	MLZB01	52	4930	4637	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962032	GCA_001832745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/745/GCA_001832745.1_ASM183274v1	-	CFSAN044959
Staphylococcus aureus S69_POEL	1413488	PRJNA226442	226442	Terrabacteria group	Firmicutes	2.80974	32.8	-	JIWO01	57	2912	2735	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391315	GCA_000639935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/935/GCA_000639935.1_Stap_aure_S69_POEL_V1	-	S69_POEL
Staphylococcus aureus SARM C4155	1413446	PRJNA226399	226399	Terrabacteria group	Firmicutes	2.74505	33	-	JIWN01	34	2841	2645	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391273	GCA_000639955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/955/GCA_000639955.1_Stap_aure_SARM_C4155_V1	-	SARM C4155
"Salmonella enterica subsp. diarizonae serovar 60:r:e,n,x,z15"	1173779	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.11788	51.4	-	MLZD01	64	5126	4761	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962056	GCA_001832765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/765/GCA_001832765.1_ASM183276v1	-	CFSAN044983
Escherichia coli	562	PRJNA266798	266798	Proteobacteria	Gammaproteobacteria	5.04388	50.5	-	JTCO01	266	5341	4819	12/19/14	2/23/17	Contig	Food and Drug Administration	SAMN03174511	GCA_000805835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/835/GCA_000805835.1_ASM80583v1	25657266	4608-58
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.35929	65.6	-	CPXF01	112	4289	4076	3/23/15	3/10/17	Scaffold	SC	SAMEA1317665	GCA_001111525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/525/GCA_001111525.1_7414_6_31	-	300798
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09131	39.6	-	CKGH01	60	2280	2028	3/21/15	3/11/17	Scaffold	SC	SAMEA1023949	GCA_001084825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/825/GCA_001084825.1_6631_1_2	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.07147	39.7	-	CMBD01	63	2291	2070	3/21/15	3/4/17	Scaffold	SC	SAMEA1029122	GCA_001085045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/045/GCA_001085045.1_7004_6_39	-	SMRU2847
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.41331	65.6	-	CQAK01	158	4314	4120	3/23/15	3/10/17	Scaffold	SC	SAMEA1523382	GCA_001112325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/325/GCA_001112325.1_8080_8_37	-	1700302
Escherichia coli	562	PRJNA221787	221787	Proteobacteria	Gammaproteobacteria	4.94579	50.6	-	JTDT01	209	5039	4707	12/23/14	2/25/17	Contig	GlaxoSmithKline	SAMN03169706	GCA_000807555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/555/GCA_000807555.1_ASM80755v1	25348524	GSK2524
"Salmonella enterica subsp. diarizonae serovar 60:r:e,n,x,z15"	1173779	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.11712	51.4	-	MLXW01	65	5128	4763	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962106	GCA_001832775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/775/GCA_001832775.1_ASM183277v1	-	CFSAN045004
Staphylococcus aureus SARM C5621	1413447	PRJNA226400	226400	Terrabacteria group	Firmicutes	2.76746	32.8	-	JIWM01	27	2886	2700	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391274	GCA_000639975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/975/GCA_000639975.1_Stap_aure_SARM_C5621_V1	-	SARM C5621
Staphylococcus aureus Sau 194	1413382	PRJNA226335	226335	Terrabacteria group	Firmicutes	2.8012	32.8	-	JIWL01	37	2913	2716	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391209	GCA_000639995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/639/995/GCA_000639995.1_Stap_aure_Sau_194_V1	-	Sau 194
Salmonella enterica subsp. diarizonae serovar 38:[k]:-	1911136	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93378	52.1	-	MLXY01	31	5070	4779	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962109	GCA_001832805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/805/GCA_001832805.1_ASM183280v1	-	CFSAN045007
Escherichia coli	562	PRJNA221787	221787	Proteobacteria	Gammaproteobacteria	4.94925	50.6	-	JSYR01	199	5041	4705	12/23/14	2/25/17	Contig	GlaxoSmithKline	SAMN03169672	GCA_000807565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/565/GCA_000807565.1_ASM80756v1	25348524	GSK25213
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.2268	65.2	-	CQPP01	713	4524	3919	3/23/15	3/10/17	Scaffold	SC	SAMEA1706673	GCA_001112865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/865/GCA_001112865.1_4925_1_7	-	D00000538
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.13614	39.4	-	CLOO01	93	2369	2148	3/21/15	3/4/17	Scaffold	SC	SAMEA1028799	GCA_001085085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/085/GCA_001085085.1_6949_1_8	-	SMRU2408
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.19201	39.5	-	CMHW01	63	2408	2160	3/23/15	3/4/17	Scaffold	SC	SAMEA1029391	GCA_001085165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/165/GCA_001085165.1_7038_6_14	-	SMRU2990
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.32783	65.6	-	CQAC01	102	4265	4070	3/22/15	3/10/17	Scaffold	SC	SAMEA1317653	GCA_001115905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/905/GCA_001115905.1_7414_6_20	-	302235
Escherichia coli	562	PRJNA221787	221787	Proteobacteria	Gammaproteobacteria	4.9336	50.6	-	JTDS01	203	5029	4698	12/23/14	2/25/17	Contig	GlaxoSmithKline	SAMN03169697	GCA_000807575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/575/GCA_000807575.1_ASM80757v1	25348524	GSK2522
Salmonella enterica subsp. diarizonae serovar 38:[k]:-	1911136	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93344	52.1	-	MLYD01	26	5067	4779	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962122	GCA_001832825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/825/GCA_001832825.1_ASM183282v1	-	CFSAN045020
Staphylococcus aureus Sau 44	1413374	PRJNA226327	226327	Terrabacteria group	Firmicutes	2.83653	32.9	-	JIWK01	35	2954	2762	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391201	GCA_000640015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/015/GCA_000640015.1_Stap_aure_Sau_44_V1	-	Sau 44
Staphylococcus aureus Sau 46	1413375	PRJNA226328	226328	Terrabacteria group	Firmicutes	2.7346	32.9	-	JIWJ01	29	2836	2649	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391202	GCA_000640035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/035/GCA_000640035.1_Stap_aure_Sau_46_V1	-	Sau 46
Salmonella enterica subsp. diarizonae serovar 38:[k]:-	1911136	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93224	52.1	-	MLYE01	26	5062	4772	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962146	GCA_001832845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/845/GCA_001832845.1_ASM183284v1	-	CFSAN045024
Escherichia coli	562	PRJNA221787	221787	Proteobacteria	Gammaproteobacteria	4.93507	50.6	-	JSYS01	194	5035	4698	12/23/14	2/23/17	Contig	GlaxoSmithKline	SAMN03169709	GCA_000807635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/635/GCA_000807635.1_ASM80763v1	25348524	GSK2528
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.26715	65.3	-	CQQD01	353	4372	4031	3/23/15	3/11/17	Scaffold	SC	SAMEA968087	GCA_001116745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/745/GCA_001116745.1_4948_5_8	-	B09601851
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.21041	39.4	-	CMBY01	90	2433	2189	3/21/15	3/4/17	Scaffold	SC	SAMEA1029183	GCA_001085285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/285/GCA_001085285.1_7004_7_70	-	SMRU2902
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.13271	39.3	-	CMJB01	51	2308	2097	3/23/15	3/4/17	Scaffold	SC	SAMEA1029193	GCA_001085305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/305/GCA_001085305.1_7038_7_2	-	SMRU3002
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36267	65.6	-	CPWM01	107	4291	4080	3/22/15	3/10/17	Scaffold	SC	SAMEA1317629	GCA_001117725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/725/GCA_001117725.1_7414_6_5	-	401206
Escherichia coli	562	PRJNA221787	221787	Proteobacteria	Gammaproteobacteria	4.93658	50.6	-	JTDU01	201	5035	4702	12/23/14	2/25/17	Contig	GlaxoSmithKline	SAMN03169711	GCA_000807655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/807/655/GCA_000807655.1_ASM80765v1	25348524	GSK252FU
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70172	52.2	-	MLZG01	44	4772	4513	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962150	GCA_001832855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/832/855/GCA_001832855.1_ASM183285v1	-	CFSAN045028
Staphylococcus aureus Sau 47	1413376	PRJNA226329	226329	Terrabacteria group	Firmicutes	2.7837	32.9	-	JIWI01	44	2883	2686	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391203	GCA_000640055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/055/GCA_000640055.1_Stap_aure_Sau_47_V1	-	Sau 47
Staphylococcus aureus Sau 74	1413377	PRJNA226330	226330	Terrabacteria group	Firmicutes	2.73216	32.9	-	JIWH01	33	2814	2633	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391204	GCA_000640075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/075/GCA_000640075.1_Stap_aure_Sau_74_V1	-	Sau 74
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.20465	52	-	MLSL01	57	5432	5146	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961969	GCA_001833065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/065/GCA_001833065.1_ASM183306v1	-	CFSAN044902
Escherichia coli JT5	1451264	PRJNA234339	234339	Proteobacteria	Gammaproteobacteria	4.93322	50.7	-	JAQA01	168	5142	4838	12/29/14	2/23/17	Contig	The Singapore Centre on Environmental Life Sciences Engineering	SAMN03273577	GCA_000809145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/809/145/GCA_000809145.1_ASM80914v1	-	JT5
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.30498	65.3	-	CQEX01	326	4404	3918	3/23/15	3/10/17	Scaffold	SC	SAMEA787747	GCA_001118545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/545/GCA_001118545.1_6280_6_10	-	A70196
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.06315	39.7	-	CLWQ01	48	2265	2035	3/21/15	3/4/17	Scaffold	SC	SAMEA1028798	GCA_001085425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/425/GCA_001085425.1_6983_5_14	-	SMRU2318
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09563	39.6	-	CKHO01	63	2305	2071	3/21/15	3/11/17	Scaffold	SC	SAMEA1023712	GCA_001085665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/665/GCA_001085665.1_6631_2_24	-	14
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36435	65.6	-	CPXS01	93	4292	4095	3/22/15	3/11/17	Scaffold	SC	SAMEA1317650	GCA_001119505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/505/GCA_001119505.1_7414_6_7	-	400673
Escherichia coli	562	PRJNA269663	269663	Proteobacteria	Gammaproteobacteria	4.71543	50.6	-	JWKH01	188	4839	4529	12/31/14	2/23/17	Contig	University of Malaya	SAMN03256242	GCA_000812235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/235/GCA_000812235.1_ASM81223v1	-	EC15
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93386	52.1	-	MLSM01	26	5066	4776	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961970	GCA_001833075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/075/GCA_001833075.1_ASM183307v1	-	CFSAN044903
Staphylococcus aureus Sau 93	1413378	PRJNA226331	226331	Terrabacteria group	Firmicutes	2.813	32.8	-	JIWG01	32	2918	2739	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391205	GCA_000640095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/095/GCA_000640095.1_Stap_aure_Sau_93_V1	-	Sau 93
Staphylococcus aureus Sau 95	1413379	PRJNA226332	226332	Terrabacteria group	Firmicutes	2.80105	32.9	-	JIWF01	34	2897	2709	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391206	GCA_000640115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/115/GCA_000640115.1_Stap_aure_Sau_95_V1	-	Sau 95
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.20588	52	-	MLSK01	54	5430	5145	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961968	GCA_001833085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/085/GCA_001833085.1_ASM183308v1	-	CFSAN044901
Escherichia coli	562	PRJNA269654	269654	Proteobacteria	Gammaproteobacteria	4.89653	50.5	-	JWKC01	218	5105	4754	12/31/14	2/23/17	Contig	University of Malaya	SAMN03256164	GCA_000812255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/255/GCA_000812255.1_ASM81225v1	-	EC2
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.286	65.3	-	CQGE01	291	4377	3958	3/23/15	3/11/17	Scaffold	SC	SAMEA787745	GCA_001119665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/665/GCA_001119665.1_6280_7_1	-	A70144_2
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.13547	39.3	-	CKIC01	72	2336	2103	3/21/15	3/11/17	Scaffold	SC	SAMEA1023912	GCA_001085705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/705/GCA_001085705.1_6631_3_20	-	10A
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.13052	39.6	-	CLSM01	67	2351	2093	3/21/15	3/11/17	Scaffold	SC	SAMEA1028850	GCA_001085785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/785/GCA_001085785.1_6972_3_8	-	SMRU2576
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.28629	65.5	-	CQFT01	189	4272	3996	3/22/15	3/11/17	Scaffold	SC	SAMEA787702	GCA_001119945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/945/GCA_001119945.1_6180_1_9	-	A70547
Escherichia coli	562	PRJNA269656	269656	Proteobacteria	Gammaproteobacteria	5.18609	50.5	-	JWKD01	248	5447	5089	12/31/14	2/23/17	Contig	University of Malaya	SAMN03256208	GCA_000812305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/305/GCA_000812305.1_ASM81230v1	-	EC3
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.20325	52	-	MLSJ01	47	5419	5147	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961967	GCA_001833095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/095/GCA_001833095.1_ASM183309v1	-	CFSAN044900
Staphylococcus aureus Sau 98	1413380	PRJNA226333	226333	Terrabacteria group	Firmicutes	2.74096	32.9	-	JIWE01	30	2839	2660	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391207	GCA_000640135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/135/GCA_000640135.1_Stap_aure_Sau_98_V1	-	Sau 98
Staphylococcus aureus Sau 99	1413381	PRJNA226334	226334	Terrabacteria group	Firmicutes	2.78119	32.9	-	JIWD01	30	2885	2692	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391208	GCA_000640155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/155/GCA_000640155.1_Stap_aure_Sau_99_V1	-	Sau 99
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93346	52.1	-	MLSN01	31	5065	4774	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961971	GCA_001833145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/145/GCA_001833145.1_ASM183314v1	-	CFSAN044904
Escherichia coli	562	PRJNA269657	269657	Proteobacteria	Gammaproteobacteria	5.20527	50.6	-	JWKE01	237	5448	5051	12/31/14	2/23/17	Contig	University of Malaya	SAMN03256211	GCA_000812325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/325/GCA_000812325.1_ASM81232v1	-	EC4
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.3246	65.4	-	CQFK01	205	4328	4030	3/22/15	3/11/17	Scaffold	SC	SAMEA787714	GCA_001120965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/965/GCA_001120965.1_6180_2_4	-	A70757
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.15367	39.6	-	CPOO01	43	2396	2152	3/22/15	3/11/17	Scaffold	SC	SAMEA1020830	GCA_001085885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/885/GCA_001085885.1_6570_3_13	-	SPN4876
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.06035	39.5	-	CKTI01	76	2297	2052	3/21/15	3/11/17	Scaffold	SC	SAMEA1025583	GCA_001085945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/945/GCA_001085945.1_6807_3_11	-	SMRU1619
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.29665	64.7	-	CQFV01	317	4493	3842	3/23/15	3/11/17	Scaffold	SC	SAMEA787750	GCA_001121325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/325/GCA_001121325.1_6280_6_8	-	A70144_1
Escherichia coli	562	PRJNA269658	269658	Proteobacteria	Gammaproteobacteria	5.2684	50.5	-	JWKF01	248	5560	5154	12/31/14	2/25/17	Contig	University of Malaya	SAMN03256216	GCA_000812345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/345/GCA_000812345.1_ASM81234v1	-	EC5
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93341	52.1	-	MLSO01	28	5066	4774	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961972	GCA_001833155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/155/GCA_001833155.1_ASM183315v1	-	CFSAN044905
Staphylococcus aureus Tur-12	1413555	PRJNA226510	226510	Terrabacteria group	Firmicutes	2.90374	32.7	-	JIWC01	57	3062	2858	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391382	GCA_000640175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/175/GCA_000640175.1_Stap_aure_Tur-12_V1	-	Tur-12
Staphylococcus aureus Tur-15	1413556	PRJNA226511	226511	Terrabacteria group	Firmicutes	2.82622	32.9	-	JIWB01	34	2949	2766	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391383	GCA_000640195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/195/GCA_000640195.1_Stap_aure_Tur-15_V1	-	Tur-15
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93429	52.1	-	MLSP01	30	5070	4775	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961973	GCA_001833165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/165/GCA_001833165.1_ASM183316v1	-	CFSAN044906
Escherichia coli	562	PRJNA269660	269660	Proteobacteria	Gammaproteobacteria	5.27509	50.5	-	JWKG01	246	5571	5169	12/31/14	2/23/17	Contig	University of Malaya	SAMN03256224	GCA_000812365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/365/GCA_000812365.1_ASM81236v1	-	EC7
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.40303	65.6	-	CPWC01	99	4311	4092	3/23/15	3/11/17	Scaffold	SC	SAMEA1523358	GCA_001121545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/545/GCA_001121545.1_8080_8_32	-	1500176
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.16126	39.6	-	CKPR01	54	2369	2100	3/21/15	3/11/17	Scaffold	SC	SAMEA1024709	GCA_001085985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/985/GCA_001085985.1_6680_5_2	-	SMRU914
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.16731	39.4	-	CMOB01	56	2377	2142	3/23/15	3/11/17	Scaffold	SC	SAMEA2061482	GCA_001086045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/045/GCA_001086045.1_9803_7_25	-	19F
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.28662	65	-	CQFB01	458	4498	3862	3/23/15	3/11/17	Scaffold	SC	SAMEA787712	GCA_001121985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/985/GCA_001121985.1_6280_8_4	-	A70136
Escherichia coli	562	PRJNA269996	269996	Proteobacteria	Gammaproteobacteria	4.88088	50.5	-	JWPU01	213	5048	4765	12/31/14	2/23/17	Contig	University of Malaya	SAMN03261524	GCA_000812385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/385/GCA_000812385.1_ASM81238v1	-	EC2_7
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93447	52.1	-	MLSQ01	32	5067	4771	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961974	GCA_001833185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/185/GCA_001833185.1_ASM183318v1	-	CFSAN044907
Staphylococcus aureus Tur-16	1413373	PRJNA226326	226326	Terrabacteria group	Firmicutes	2.74893	32.9	-	JIWA01	24	2844	2665	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391200	GCA_000640215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/215/GCA_000640215.1_Stap_aure_Tur-16_V1	-	Tur-16
Staphylococcus aureus Tur-20	1413551	PRJNA226506	226506	Terrabacteria group	Firmicutes	2.7864	32.9	-	JIVZ01	49	2894	2705	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391378	GCA_000640235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/235/GCA_000640235.1_Stap_aure_Tur-20_V1	-	Tur-20
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74303	52.1	-	MLSR01	45	4838	4580	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961976	GCA_001833225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/225/GCA_001833225.1_ASM183322v1	-	CFSAN044909
Escherichia coli	562	PRJNA269672	269672	Proteobacteria	Gammaproteobacteria	5.21978	50.6	-	JWKL01	251	5518	5132	12/31/14	2/23/17	Contig	University of Malaya	SAMN03256249	GCA_000812705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/705/GCA_000812705.1_ASM81270v1	-	EC2_3
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.38314	65.6	-	CPZC01	104	4290	4121	3/22/15	3/11/17	Scaffold	SC	SAMEA1523374	GCA_001123765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/765/GCA_001123765.1_8080_8_38	-	1700938
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.04961	39.7	-	CLVX01	64	2232	2032	3/21/15	3/11/17	Scaffold	SC	SAMEA1026212	GCA_001086065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/065/GCA_001086065.1_6983_4_77	-	SMRU2285
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.12125	39.6	-	CKMJ01	39	2312	2046	3/21/15	3/14/17	Scaffold	SC	SAMEA1024204	GCA_001086145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/145/GCA_001086145.1_6649_8_11	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.3371	65.4	-	CQFN01	194	4332	4039	3/23/15	3/11/17	Scaffold	SC	SAMEA787754	GCA_001123785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/785/GCA_001123785.1_6180_1_4	-	A70376
Escherichia coli	562	PRJNA269666	269666	Proteobacteria	Gammaproteobacteria	4.83127	50.6	-	JWKI01	221	4991	4681	12/31/14	2/23/17	Contig	University of Malaya	SAMN03256243	GCA_000812715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/715/GCA_000812715.1_ASM81271v1	-	EC11
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.12432	52.1	-	MLSV01	45	5318	5045	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961982	GCA_001833235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/235/GCA_001833235.1_ASM183323v1	-	CFSAN044915
Staphylococcus aureus Tur-22	1413552	PRJNA226507	226507	Terrabacteria group	Firmicutes	2.82085	32.9	-	JIVY01	41	2948	2756	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391379	GCA_000640255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/255/GCA_000640255.1_Stap_aure_Tur-22_V1	-	Tur-22
Staphylococcus aureus Tur-6	1413554	PRJNA226509	226509	Terrabacteria group	Firmicutes	2.83085	32.9	-	JIVV01	37	2977	2782	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391381	GCA_000640275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/275/GCA_000640275.1_Stap_aure_Tur-6_V1	-	Tur-6
Salmonella enterica subsp. enterica serovar Rubislaw	598	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.96457	52.1	-	MLSX01	62	5085	4787	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961988	GCA_001833255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/255/GCA_001833255.1_ASM183325v1	-	CFSAN044921
Escherichia coli	562	PRJNA269670	269670	Proteobacteria	Gammaproteobacteria	4.94139	50.5	-	JWKJ01	198	5095	4765	12/31/14	2/23/17	Contig	University of Malaya	SAMN03256247	GCA_000812725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/725/GCA_000812725.1_ASM81272v1	-	EC2_1
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.37673	65.6	-	CPYF01	90	4282	4080	3/23/15	3/11/17	Scaffold	SC	SAMEA1317626	GCA_001125745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/745/GCA_001125745.1_7414_6_22	-	400260
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.17973	39.5	-	CPKH01	74	2404	2187	3/23/15	3/11/17	Scaffold	SC	SAMEA682301	GCA_001086205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/205/GCA_001086205.1_5392_5_4	-	spnIC58
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.06256	39.5	-	CLSK01	54	2280	2050	3/21/15	3/11/17	Scaffold	SC	SAMEA1028845	GCA_001086225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/225/GCA_001086225.1_6972_3_9	-	SMRU2577
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.32549	65.5	-	CQFX01	185	4308	4028	3/22/15	3/11/17	Scaffold	SC	SAMEA787725	GCA_001126925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/925/GCA_001126925.1_6180_2_9	-	A70785
Escherichia coli	562	PRJNA269671	269671	Proteobacteria	Gammaproteobacteria	5.05201	50.1	-	JWKK01	145	5153	4801	12/31/14	2/23/17	Contig	University of Malaya	SAMN03256248	GCA_000812765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/765/GCA_000812765.1_ASM81276v1	-	EC2_2
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93386	52.1	-	MLSZ01	27	5068	4777	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961991	GCA_001833275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/275/GCA_001833275.1_ASM183327v1	-	CFSAN044924
Staphylococcus aureus UB 08-116	1413331	PRJNA226284	226284	Terrabacteria group	Firmicutes	2.74097	32.9	-	JIVU01	29	2825	2660	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391158	GCA_000640295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/295/GCA_000640295.1_Stap_aure_UB_08-116_V1	-	UB 08-116
Staphylococcus aureus UB 08-172	1413332	PRJNA226285	226285	Terrabacteria group	Firmicutes	2.78115	32.9	-	JIVT01	30	2903	2728	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391159	GCA_000640315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/315/GCA_000640315.1_Stap_aure_UB_08-172_V1	-	UB 08-172
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70259	52.2	-	MLTA01	42	4775	4517	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961992	GCA_001833305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/305/GCA_001833305.1_ASM183330v1	-	CFSAN044925
Escherichia coli	562	PRJNA269673	269673	Proteobacteria	Gammaproteobacteria	4.89828	50.5	-	JWKM01	160	5047	4772	12/31/14	2/23/17	Contig	University of Malaya	SAMN03256250	GCA_000812785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/785/GCA_000812785.1_ASM81278v1	-	EC2_6
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.28465	65.4	-	CQFG01	182	4282	3998	3/22/15	3/11/17	Scaffold	SC	SAMEA787756	GCA_001127945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/945/GCA_001127945.1_6180_1_10	-	A70659
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.13273	39.5	-	CKRL01	51	2364	2119	3/21/15	3/11/17	Scaffold	SC	SAMEA1024900	GCA_001086245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/245/GCA_001086245.1_6680_7_7	-	SMRU967
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08892	39.7	-	CKXR01	73	2312	2098	3/21/15	3/11/17	Scaffold	SC	SAMEA1026057	GCA_001086385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/385/GCA_001086385.1_6823_7_19	-	SMRU2011
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.25418	64.7	-	CQFP01	242	4473	3860	3/23/15	3/11/17	Scaffold	SC	SAMEA787742	GCA_001128125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/125/GCA_001128125.1_6280_6_9	-	A70170
Escherichia coli RS218	439184	PRJNA271212	271212	Proteobacteria	Gammaproteobacteria	5.17308	50.6	-	JWZW01	67	5419	5078	1/12/15	2/23/17	Contig	University of Oklahoma Health Sciences Center	SAMN03273305	GCA_000817345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/345/GCA_000817345.1_ASM81734v1	-	RS218
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70253	52.2	-	MLTB01	46	4775	4514	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961993	GCA_001833315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/315/GCA_001833315.1_ASM183331v1	-	CFSAN044926
Staphylococcus aureus USA_1	1413602	PRJNA226558	226558	Terrabacteria group	Firmicutes	2.78817	32.9	-	JIVS01	21	2899	2725	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391429	GCA_000640335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/335/GCA_000640335.1_Stap_aure_USA_1_V1	-	USA_1
Staphylococcus aureus USA_11	1413607	PRJNA226564	226564	Terrabacteria group	Firmicutes	2.72857	32.9	-	JIVR01	24	2827	2647	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391434	GCA_000640355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/355/GCA_000640355.1_Stap_aure_USA_11_V1	-	USA_11
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.7031	52.2	-	MLTC01	47	4775	4513	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961994	GCA_001833325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/325/GCA_001833325.1_ASM183332v1	-	CFSAN044927
Escherichia coli	562	PRJNA246188	246188	Proteobacteria	Gammaproteobacteria	5.4783	50.5	-	JMQO01	96	5851	5440	1/12/15	2/23/17	Contig	University of Oklahoma Health Sciences Center	SAMN02743814	GCA_000817355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/355/GCA_000817355.1_SCB12	-	SCB12
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.29288	65.3	-	CQPU01	245	4329	4053	3/23/15	3/11/17	Scaffold	SC	SAMEA968216	GCA_001128725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/725/GCA_001128725.1_4948_5_12	-	B09701572
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.04094	39.6	-	CLVB01	68	2248	2035	3/21/15	3/4/17	Scaffold	SC	SAMEA1025984	GCA_001086545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/545/GCA_001086545.1_6983_3_56	-	SMRU2264
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11214	39.6	-	CMGL01	77	2346	2102	3/23/15	3/4/17	Scaffold	SC	SAMEA1029279	GCA_001086565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/565/GCA_001086565.1_7038_4_5	-	SMRU2933
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.42673	65.6	-	CPWD01	98	4354	4148	3/23/15	3/11/17	Scaffold	SC	SAMEA1317630	GCA_001128805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/805/GCA_001128805.1_8080_8_40	-	402713
Escherichia coli	562	PRJNA252094	252094	Proteobacteria	Gammaproteobacteria	5.1055	50.5	-	JSYT01	74	5262	4901	1/12/15	2/25/17	Contig	University of Oklahoma Health Sciences Center	SAMN02849417	GCA_000817375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/375/GCA_000817375.1_Iso_11_A5	-	SCB11
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70224	52.2	-	MLTD01	43	4774	4514	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961995	GCA_001833345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/345/GCA_001833345.1_ASM183334v1	-	CFSAN044928
Staphylococcus aureus USA_12	1413608	PRJNA226565	226565	Terrabacteria group	Firmicutes	2.73776	32.9	-	JIVQ01	25	2841	2658	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391435	GCA_000640375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/375/GCA_000640375.1_Stap_aure_USA_12_V1	-	USA_12
Staphylococcus aureus USA_15	1413609	PRJNA226566	226566	Terrabacteria group	Firmicutes	2.76533	32.9	-	JIVP01	25	2873	2707	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391436	GCA_000640395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/395/GCA_000640395.1_Stap_aure_USA_15_V1	-	USA_15
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70238	52.2	-	MLTG01	46	4771	4511	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961998	GCA_001833385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/385/GCA_001833385.1_ASM183338v1	-	CFSAN044931
Escherichia coli	562	PRJNA252096	252096	Proteobacteria	Gammaproteobacteria	4.92152	50.6	-	JSYU01	141	5014	4739	1/12/15	2/25/17	Contig	University of Oklahoma Health Sciences Center	SAMN02849418	GCA_000817425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/817/425/GCA_000817425.1_Iso_15_A5	-	SCB15
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.35691	65.6	-	CPWE01	107	4290	4080	3/22/15	3/11/17	Scaffold	SC	SAMEA1317628	GCA_001128865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/865/GCA_001128865.1_7414_6_32	-	301816
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.18052	39.5	-	CLGY01	66	2435	2203	3/21/15	3/4/17	Scaffold	SC	SAMEA1026175	GCA_001086605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/605/GCA_001086605.1_6925_4_23	-	SMRU2159
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08994	39.6	-	CKYC01	50	2282	2031	3/21/15	3/15/17	Scaffold	SC	SAMEA1025977	GCA_001086665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/665/GCA_001086665.1_6823_7_24	-	SMRU2016
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36375	65.6	-	CPVX01	93	4284	4082	3/23/15	3/11/17	Scaffold	SC	SAMEA1317634	GCA_001130685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/685/GCA_001130685.1_7414_6_61	-	401539
Escherichia coli C691-71 (14b)	1010817	PRJNA66221	66221	Proteobacteria	Gammaproteobacteria	5.12284	50.4	-	JXBV01	158	5376	5076	1/15/15	2/23/17	Contig	JCVI	SAMN00623092	GCA_000818965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/965/GCA_000818965.1_CLC_assembly_of_Escherichia_coli_C691-71	-	C691-71 (14b)
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70279	52.2	-	MLTH01	44	4779	4515	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961999	GCA_001833395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/395/GCA_001833395.1_ASM183339v1	-	CFSAN044932
Staphylococcus aureus USA_8	1413605	PRJNA226561	226561	Terrabacteria group	Firmicutes	2.81852	32.9	-	JIVN01	46	2936	2754	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391432	GCA_000640415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/415/GCA_000640415.1_Stap_aure_USA_8_V1	-	USA_8
Staphylococcus aureus USA_9	1413606	PRJNA226562	226562	Terrabacteria group	Firmicutes	2.73694	32.9	-	JIVM01	25	2828	2653	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391433	GCA_000640435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/435/GCA_000640435.1_Stap_aure_USA_9_V1	-	USA_9
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70199	52.2	-	MLTI01	42	4770	4515	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962000	GCA_001833405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/405/GCA_001833405.1_ASM183340v1	-	CFSAN044933
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.0029	50.5	-	JWZK01	97	5247	4924	1/16/15	2/25/17	Contig	FDA	SAMN03177636	GCA_000818985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/985/GCA_000818985.1_Escherichia_coli_CVM_N33857PS_v1.0	26142410	CVM N33857PS
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36207	65.6	-	CPXL01	106	4300	4089	3/22/15	3/11/17	Scaffold	SC	SAMEA1317622	GCA_001131705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/705/GCA_001131705.1_7414_6_42	-	402797
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.25549	39.4	-	CLLX01	69	2485	2222	3/21/15	3/4/17	Scaffold	SC	SAMEA1029106	GCA_001086905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/905/GCA_001086905.1_6938_6_22	-	SMRU2686
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.17729	39.6	-	CLSC01	56	2408	2181	3/21/15	3/4/17	Scaffold	SC	SAMEA1028938	GCA_001086925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/925/GCA_001086925.1_6972_3_23	-	SMRU2591
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.20931	64.6	-	CQFM01	450	4553	3810	3/23/15	3/11/17	Scaffold	SC	SAMEA787710	GCA_001132305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/305/GCA_001132305.1_6280_6_2	-	A70011_2
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.11394	50.7	-	JWZI01	190	5393	5036	1/16/15	2/25/17	Contig	FDA	SAMN03177642	GCA_000818995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/995/GCA_000818995.1_Escherichia_coli_CVM_N34152PS_v1.0	26142410	CVM N34152PS
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70229	52.2	-	MLTJ01	45	4770	4514	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962001	GCA_001833415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/415/GCA_001833415.1_ASM183341v1	-	CFSAN044934
Staphylococcus aureus USA7	1413604	PRJNA226560	226560	Terrabacteria group	Firmicutes	2.73677	32.9	-	JIVL01	21	2840	2663	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391431	GCA_000640455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/455/GCA_000640455.1_Stap_aure_USA7_V1	-	USA7
Staphylococcus aureus VE07/03048STA	1413448	PRJNA226401	226401	Terrabacteria group	Firmicutes	2.78627	32.8	-	JIVK01	43	2901	2717	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391275	GCA_000640475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/475/GCA_000640475.1_Stap_aure_VE07_03048STA_V1	-	VE07/03048STA
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.7027	52.2	-	MLTK01	47	4782	4519	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962002	GCA_001833465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/465/GCA_001833465.1_ASM183346v1	-	CFSAN044935
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.27676	50.6	-	JWZL01	113	5482	5161	1/16/15	2/25/17	Contig	FDA	SAMN03177634	GCA_000819005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/005/GCA_000819005.1_Escherichia_coli_CVM_N33825PS_v1.0	26142410	CVM N33825PS
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.17473	65.1	-	CQQB01	820	4488	3873	3/23/15	3/11/17	Scaffold	SC	SAMEA968083	GCA_001133005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/005/GCA_001133005.1_4948_5_5	-	A00400885
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.0735	39.5	-	CLQH01	76	2269	2055	3/21/15	3/4/17	Scaffold	SC	SAMEA1028676	GCA_001086965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/965/GCA_001086965.1_6949_3_9	-	SMRU2457
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12926	39.8	-	CKPP01	73	2322	2035	3/21/15	3/6/17	Scaffold	SC	SAMEA1024556	GCA_001087045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/045/GCA_001087045.1_6680_5_12	-	SMRU924
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.23796	65.2	-	CQFA01	496	4439	3905	3/22/15	3/11/17	Scaffold	SC	SAMEA787746	GCA_001133325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/325/GCA_001133325.1_6280_7_2	-	A70260
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.30217	50.4	-	JWZJ01	257	5717	5348	1/16/15	2/25/17	Contig	FDA	SAMN03177638	GCA_000819015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/015/GCA_000819015.1_Escherichia_coli_CVM_N33978PS_v1.0	26142410	CVM N33978PS
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70234	52.2	-	MLTO01	47	4768	4515	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962006	GCA_001833485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/485/GCA_001833485.1_ASM183348v1	-	CFSAN044939
Staphylococcus aureus VE08/02126ST1	1413449	PRJNA226402	226402	Terrabacteria group	Firmicutes	2.76036	32.9	-	JIVJ01	35	2872	2680	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391276	GCA_000640495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/495/GCA_000640495.1_Stap_aure_VE08_02126ST1_V1	-	VE08/02126ST1
Staphylococcus aureus VE08/02244ST1	1413451	PRJNA226404	226404	Terrabacteria group	Firmicutes	2.75957	32.9	-	JIVH01	33	2869	2687	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02391278	GCA_000640515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/515/GCA_000640515.1_Stap_aure_VE08_02244ST1_V1	-	VE08/02244ST1
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.20678	52	-	MLTP01	55	5422	5145	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962007	GCA_001833495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/495/GCA_001833495.1_ASM183349v1	-	CFSAN044940
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.13446	50.8	-	JWZH01	226	5374	5014	1/16/15	2/25/17	Contig	FDA	SAMN03177643	GCA_000819065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/065/GCA_000819065.1_Escherichia_coli_CVM_N34228PS_v1.0	26142410	CVM N34228PS
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36133	65.6	-	CPXI01	112	4296	4079	3/23/15	3/11/17	Scaffold	SC	SAMEA1317670	GCA_001133345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/345/GCA_001133345.1_7414_6_58	-	302350
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10517	39.7	-	CLPN01	49	2337	2099	3/21/15	3/11/17	Scaffold	SC	SAMEA1028784	GCA_001087125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/125/GCA_001087125.1_6949_3_18	-	SMRU2466
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.06485	39.5	-	CKIV01	59	2280	2038	3/21/15	3/11/17	Scaffold	SC	SAMEA1023756	GCA_001087185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/185/GCA_001087185.1_6631_4_18	-	15B
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36082	65.6	-	CPVK01	112	4291	4078	3/23/15	3/11/17	Scaffold	SC	SAMEA1317619	GCA_001134265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/265/GCA_001134265.1_7414_6_36	-	402629
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.14227	50.7	-	JWZO01	96	5368	5072	1/16/15	2/25/17	Contig	FDA	SAMN03177622	GCA_000819085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/085/GCA_000819085.1_Escherichia_coli_CVM_N33624PS_v1.0	26142410	CVM N33624PS
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70247	52.2	-	MLTQ01	44	4774	4515	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962014	GCA_001833505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/505/GCA_001833505.1_ASM183350v1	-	CFSAN044941
Staphylococcus aureus VET0051R	1422391	PRJNA228481	228481	Terrabacteria group	Firmicutes	2.76174	32.8	-	JIVF01	33	2876	2683	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02403974	GCA_000640535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/535/GCA_000640535.1_Stap_aure_VET0051R_V1	-	VET0051R
Staphylococcus aureus VET0052R	1422392	PRJNA228482	228482	Terrabacteria group	Firmicutes	2.80191	32.8	-	JIVE01	41	2901	2713	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02403975	GCA_000640555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/555/GCA_000640555.1_Stap_aure_VET0052R_V1	-	VET0052R
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93426	52.1	-	MLTT01	29	5069	4776	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962017	GCA_001833545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/545/GCA_001833545.1_ASM183354v1	-	CFSAN044944
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	4.95621	50.2	-	JWZM01	206	5207	4870	1/16/15	2/25/17	Contig	FDA	SAMN03177630	GCA_000819105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/105/GCA_000819105.1_Escherichia_coli_CVM_N33720PS_v1.0	26142410	CVM N33720PS
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.23965	65.2	-	CQPX01	573	4459	3990	3/23/15	3/10/17	Scaffold	SC	SAMEA968161	GCA_001134885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/885/GCA_001134885.1_4948_5_1	-	A09900565
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1877	39.7	-	CLDE01	108	2380	2158	3/21/15	3/11/17	Scaffold	SC	SAMEA1026222	GCA_001087225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/225/GCA_001087225.1_6899_4_24	-	SMRU2040
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.17882	39.6	-	CMTJ01	68	2371	2105	3/23/15	3/11/17	Scaffold	SC	SAMEA1022767	GCA_001087325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/325/GCA_001087325.1_5737_2_8	-	16188
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.39233	65.6	-	CPXR01	104	4300	4081	3/23/15	3/11/17	Scaffold	SC	SAMEA1523373	GCA_001136885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/885/GCA_001136885.1_8080_8_2	-	201009
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	4.83089	50.7	-	JWZG01	134	4934	4607	1/16/15	2/23/17	Contig	FDA	SAMN03177650	GCA_000819125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/125/GCA_000819125.1_Escherichia_coli_CVM_N34564PS_v1.0	26142410	CVM N34564PS
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93349	52.1	-	MLTW01	26	5065	4777	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962022	GCA_001833565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/565/GCA_001833565.1_ASM183356v1	-	CFSAN044949
Staphylococcus aureus VET0053R	1422393	PRJNA228483	228483	Terrabacteria group	Firmicutes	2.83701	32.9	-	JIVD01	37	2988	2789	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02403976	GCA_000640575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/575/GCA_000640575.1_Stap_aure_VET0053R_V1	-	VET0053R
Staphylococcus aureus VET0054R	1422394	PRJNA228484	228484	Terrabacteria group	Firmicutes	2.76001	32.8	-	JIVC01	32	2862	2685	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02403977	GCA_000640595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/595/GCA_000640595.1_Stap_aure_VET0054R_V1	-	VET0054R
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.20453	52	-	MLTX01	48	5431	5146	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962023	GCA_001833585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/585/GCA_001833585.1_ASM183358v1	-	CFSAN044950
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.64063	50.4	-	JWZF01	321	6095	5614	1/16/15	2/25/17	Contig	FDA	SAMN03177651	GCA_000819145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/145/GCA_000819145.1_Escherichia_coli_CVM_N34577PS_v1.0	26142410	CVM N34577PS
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36106	65.6	-	CQAF01	109	4294	4085	3/22/15	3/11/17	Scaffold	SC	SAMEA1317656	GCA_001138485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/485/GCA_001138485.1_7414_6_29	-	401594
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.23945	39.4	-	CLRN01	81	2457	2220	3/21/15	3/11/17	Scaffold	SC	SAMEA1029035	GCA_001087385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/385/GCA_001087385.1_6972_2_23	-	SMRU2567
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08381	39.7	-	CMEC01	60	2329	2097	3/21/15	3/11/17	Scaffold	SC	SAMEA1028918	GCA_001087405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/405/GCA_001087405.1_7011_4_21	-	SMRU2781
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.30597	65.4	-	CQFL01	161	4290	4022	3/22/15	3/10/17	Scaffold	SC	SAMEA787726	GCA_001140405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/405/GCA_001140405.1_6180_2_10	-	A70763_2
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.04519	50.8	-	JWZE01	120	5193	4898	1/16/15	2/25/17	Contig	FDA	SAMN03177652	GCA_000819165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/165/GCA_000819165.1_Escherichia_coli_CVM_N35912PS_v1.0	26142410	CVM N35912PS
Salmonella enterica subsp. enterica serovar Mbandaka	192954	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.33413	51.2	-	MLTY01	75	5404	4981	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962024	GCA_001833595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/595/GCA_001833595.1_ASM183359v1	-	CFSAN044951
Staphylococcus aureus VET0055R	1422395	PRJNA228485	228485	Terrabacteria group	Firmicutes	2.83448	32.9	-	JIVB01	69	2964	2753	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02403978	GCA_000640615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/615/GCA_000640615.1_Stap_aure_VET0055R_V1	-	VET0055R
Staphylococcus aureus VET0057R	1422396	PRJNA228486	228486	Terrabacteria group	Firmicutes	2.84217	32.9	-	JIVA01	57	2967	2768	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02403979	GCA_000640635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/635/GCA_000640635.1_Stap_aure_VET0057R_V1	-	VET0057R
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93385	52.1	-	MLTZ01	29	5065	4775	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962025	GCA_001833625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/625/GCA_001833625.1_ASM183362v1	-	CFSAN044952
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.06917	50.7	-	JWZC01	155	5273	4936	1/16/15	2/25/17	Contig	FDA	SAMN03177655	GCA_000819185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/185/GCA_000819185.1_Escherichia_coli_CVM_N36113PS_v1.0	26142410	CVM N36113PS
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.30412	65.4	-	CQEV01	199	4330	4028	3/23/15	3/10/17	Scaffold	SC	SAMEA787715	GCA_001141505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/505/GCA_001141505.1_6180_2_3	-	A70730
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.16176	39.5	-	CKGO01	66	2405	2155	3/21/15	3/11/17	Scaffold	SC	SAMEA1024006	GCA_001087565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/565/GCA_001087565.1_6631_1_11	-	14
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.14354	39.4	-	CPPN01	114	2370	2139	3/22/15	3/11/17	Scaffold	SC	SAMEA1020584	GCA_001087645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/645/GCA_001087645.1_6187_7_10	-	LMG2311
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36081	65.6	-	CQCO01	80	4274	4086	3/23/15	3/10/17	Scaffold	SC	SAMEA1523357	GCA_001141625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/625/GCA_001141625.1_8080_8_6	-	201150
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	4.88963	50.7	-	JWZB01	153	5165	4831	1/16/15	2/25/17	Contig	FDA	SAMN03177658	GCA_000819205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/205/GCA_000819205.1_Escherichia_coli_CVM_N36210PS_v1.0	26142410	CVM N36210PS
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70145	52.2	-	MLUC01	45	4775	4516	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962028	GCA_001833645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/645/GCA_001833645.1_ASM183364v1	-	CFSAN044955
Staphylococcus aureus VET0059R	1422398	PRJNA228488	228488	Terrabacteria group	Firmicutes	2.82678	32.9	-	JIUY01	42	2910	2747	4/17/14	3/3/17	Scaffold	Broad Institute	SAMN02403981	GCA_000640655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/655/GCA_000640655.1_Stap_aure_VET0059R_V1	-	VET0059R
Staphylococcus aureus VET0060R	1422399	PRJNA228489	228489	Terrabacteria group	Firmicutes	2.82267	32.8	-	JIUX01	44	2946	2754	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02403982	GCA_000640675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/675/GCA_000640675.1_Stap_aure_VET0060R_V1	-	VET0060R
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70242	52.2	-	MLUG01	45	4774	4517	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962034	GCA_001833655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/655/GCA_001833655.1_ASM183365v1	-	CFSAN044961
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	4.90062	50.7	-	JWZA01	134	5082	4771	1/16/15	2/25/17	Contig	FDA	SAMN03177666	GCA_000819225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/225/GCA_000819225.1_Escherichia_coli_CVM_N36601PS_v1.0	26142410	CVM N36601PS
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.37469	65.6	-	CPVP01	85	4280	4102	3/23/15	3/11/17	Scaffold	SC	SAMEA1317652	GCA_001142645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/645/GCA_001142645.1_7414_6_11	-	301347
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.12179	39.7	-	CKJQ01	87	2294	2032	3/21/15	3/11/17	Scaffold	SC	SAMEA1023735	GCA_001087765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/765/GCA_001087765.1_6631_5_24	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.23431	39.6	-	CMFK01	66	2457	2228	3/21/15	3/11/17	Scaffold	SC	SAMEA1028615	GCA_001087825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/825/GCA_001087825.1_7011_6_12	-	SMRU2820
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36435	65.6	-	CPVE01	108	4302	4088	3/23/15	3/11/17	Scaffold	SC	SAMEA1317659	GCA_001143165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/165/GCA_001143165.1_7414_6_53	-	400731
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	4.77888	50.5	-	JWYZ01	187	4974	4662	1/16/15	2/25/17	Contig	FDA	SAMN03177677	GCA_000819245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/245/GCA_000819245.1_Escherichia_coli_CVM_N37069PS_v1.0	26142410	CVM N37069PS
Salmonella enterica subsp. enterica serovar Bareilly	58096	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.78475	52	-	MLUF01	49	4931	4639	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962033	GCA_001833665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/665/GCA_001833665.1_ASM183366v1	-	CFSAN044960
Staphylococcus aureus VET0061R	1422400	PRJNA228490	228490	Terrabacteria group	Firmicutes	2.88273	32.9	-	JIUW01	44	3016	2822	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02403983	GCA_000640695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/695/GCA_000640695.1_Stap_aure_VET0061R_V1	-	VET0061R
Staphylococcus aureus VET0062R	1422401	PRJNA228491	228491	Terrabacteria group	Firmicutes	2.82845	32.9	-	JIUV01	35	2958	2772	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02403984	GCA_000640715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/715/GCA_000640715.1_Stap_aure_VET0062R_V1	-	VET0062R
Salmonella enterica subsp. enterica serovar Rubislaw	598	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.04129	52.1	-	MLUJ01	97	5185	4863	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962037	GCA_001833705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/705/GCA_001833705.1_ASM183370v1	-	CFSAN044964
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	4.95499	50.7	-	JWYX01	146	5202	4885	1/16/15	2/25/17	Contig	FDA	SAMN03177679	GCA_000819265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/265/GCA_000819265.1_Escherichia_coli_CVM_N38428PS_v1.0	26142410	CVM N38428PS
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36149	65.6	-	CQAN01	118	4297	4083	3/23/15	3/11/17	Scaffold	SC	SAMEA1317623	GCA_001143545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/545/GCA_001143545.1_7414_6_50	-	302174
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14555	39.6	-	CKKM01	83	2293	2046	3/21/15	3/11/17	Scaffold	SC	SAMEA1024023	GCA_001087845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/845/GCA_001087845.1_6631_6_7	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1111	39.5	-	CLBP01	56	2325	2104	3/21/15	3/11/17	Scaffold	SC	SAMEA1025931	GCA_001087885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/885/GCA_001087885.1_6871_1_21	-	23F
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.35926	65.6	-	CQET01	96	4275	4083	3/23/15	3/11/17	Scaffold	SC	SAMEA1317667	GCA_001144145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/145/GCA_001144145.1_7414_6_51	-	300879
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.06256	50.7	-	JWYW01	335	5467	5033	1/16/15	2/25/17	Contig	FDA	SAMN03177683	GCA_000819285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/285/GCA_000819285.1_Escherichia_coli_CVM_N38796PS_v1.0	26142410	CVM N38796PS
Salmonella enterica subsp. enterica serovar Rubislaw	598	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.04218	52.1	-	MLUK01	98	5183	4860	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962038	GCA_001833725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/725/GCA_001833725.1_ASM183372v1	-	CFSAN044965
Staphylococcus aureus VET0063R	1422402	PRJNA228492	228492	Terrabacteria group	Firmicutes	2.83979	32.9	-	JIUU01	45	2957	2770	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02403985	GCA_000640735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/735/GCA_000640735.1_Stap_aure_VET0063R_V1	-	VET0063R
Staphylococcus aureus VET0065R	1422403	PRJNA228493	228493	Terrabacteria group	Firmicutes	2.75381	32.8	-	JIUT01	35	2853	2661	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02403986	GCA_000640755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/755/GCA_000640755.1_Stap_aure_VET0065R_V1	-	VET0065R
Salmonella enterica subsp. enterica serovar Rubislaw	598	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.04379	52.1	-	MLUL01	90	5178	4865	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962039	GCA_001833735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/735/GCA_001833735.1_ASM183373v1	-	CFSAN044966
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.23073	50.6	-	JWZD01	267	5554	5093	1/16/15	2/25/17	Contig	FDA	SAMN03177654	GCA_000819305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/305/GCA_000819305.1_Escherichia_coli_CVM_N36099PS_v1.0	26142410	CVM N36099PS
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.35835	65.6	-	CQAL01	119	4301	4076	3/23/15	3/11/17	Scaffold	SC	SAMEA1317678	GCA_001144605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/605/GCA_001144605.1_7414_6_4	-	301725
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.09629	39.7	-	CNAH01	179	2282	1989	3/22/15	3/11/17	Scaffold	SC	SAMEA1022809	GCA_001087925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/925/GCA_001087925.1_6930_7_8	-	145
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08442	39.6	-	CLYQ01	60	2317	2102	3/21/15	3/11/17	Scaffold	SC	SAMEA1028983	GCA_001087965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/965/GCA_001087965.1_6983_7_62	-	SMRU2366
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.35873	65.6	-	CQAO01	79	4276	4086	3/22/15	3/11/17	Scaffold	SC	SAMEA1317674	GCA_001147025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/025/GCA_001147025.1_8080_8_39	-	401391
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.01903	50.6	-	JWYY01	345	5336	4933	1/16/15	2/23/17	Contig	FDA	SAMN03177678	GCA_000819325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/325/GCA_000819325.1_Escherichia_coli_CVM_N38381PS_v1.0	26142410	CVM N38381PS
Salmonella enterica subsp. enterica serovar Inverness	913074	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.02065	52.1	-	MLUM01	48	5186	4876	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962040	GCA_001833745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/745/GCA_001833745.1_ASM183374v1	-	CFSAN044967
Staphylococcus aureus VET0066R	1422404	PRJNA228494	228494	Terrabacteria group	Firmicutes	2.84565	32.9	-	JIUS01	38	2985	2790	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02403987	GCA_000640775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/775/GCA_000640775.1_Stap_aure_VET0066R_V1	-	VET0066R
Staphylococcus aureus VET0067R	1422405	PRJNA228495	228495	Terrabacteria group	Firmicutes	2.86131	32.9	-	JIUR01	41	2994	2803	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02403988	GCA_000640795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/795/GCA_000640795.1_Stap_aure_VET0067R_V1	-	VET0067R
Salmonella enterica subsp. enterica serovar Inverness	913074	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.02072	52.1	-	MLUN01	49	5187	4879	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962041	GCA_001833785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/785/GCA_001833785.1_ASM183378v1	-	CFSAN044968
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	4.92795	50.6	-	JWZP01	185	5084	4778	1/16/15	2/25/17	Contig	FDA	SAMN03177620	GCA_000819345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/345/GCA_000819345.1_Escherichia_coli_CVM_N33591PS_v1.0	26142410	CVM N33591PS
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.31524	65.4	-	CQFR01	165	4290	4006	3/22/15	3/11/17	Scaffold	SC	SAMEA787729	GCA_001147145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/145/GCA_001147145.1_6180_2_5	-	A70762
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12767	39.5	-	CLUQ01	50	2361	2119	3/21/15	3/11/17	Scaffold	SC	SAMEA1026162	GCA_001088025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/025/GCA_001088025.1_6983_2_2	-	SMRU2210
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08769	39.7	-	CLGV01	58	2307	2089	3/21/15	3/4/17	Scaffold	SC	SAMEA1026099	GCA_001088265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/265/GCA_001088265.1_6925_4_20	-	SMRU2156
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.38138	65.6	-	CPYQ01	85	4299	4076	3/23/15	3/11/17	Scaffold	SC	SAMEA1317649	GCA_001147745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/745/GCA_001147745.1_7414_6_2	-	400285
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	4.95103	50.6	-	JWZQ01	144	5150	4843	1/16/15	2/25/17	Contig	FDA	SAMN03177618	GCA_000819355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/355/GCA_000819355.1_Escherichia_coli_CVM_N33574PS_v1.0	26142410	CVM N33574PS
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70379	52.2	-	MLUO01	45	4772	4515	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962043	GCA_001833805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/805/GCA_001833805.1_ASM183380v1	-	CFSAN044970
Staphylococcus aureus VET0069R	1422406	PRJNA228496	228496	Terrabacteria group	Firmicutes	2.88178	32.8	-	JIUQ01	48	3020	2825	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02403989	GCA_000640815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/815/GCA_000640815.1_Stap_aure_VET0069R_V1	-	VET0069R
Staphylococcus aureus VET0070R	1422407	PRJNA228497	228497	Terrabacteria group	Firmicutes	2.81188	32.8	-	JIUP01	39	2936	2750	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02403990	GCA_000640835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/835/GCA_000640835.1_Stap_aure_VET0070R_V1	-	VET0070R
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70696	52.2	-	MLUP01	46	4778	4521	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962044	GCA_001833815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/815/GCA_001833815.1_ASM183381v1	-	CFSAN044971
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.12366	50.7	-	JWZN01	394	5357	4926	1/16/15	2/25/17	Contig	FDA	SAMN03177626	GCA_000819365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/365/GCA_000819365.1_Escherichia_coli_CVM_N33653PS_v1.0	26142410	CVM N33653PS
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.23854	64.6	-	CQGB01	283	4490	3800	3/22/15	3/11/17	Scaffold	SC	SAMEA787711	GCA_001148065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/065/GCA_001148065.1_6280_6_1	-	A70011_1
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09854	39.6	-	CKMM01	49	2301	2040	3/21/15	3/15/17	Scaffold	SC	SAMEA1024087	GCA_001088325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/325/GCA_001088325.1_6649_8_1	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.14166	39.5	-	CPPO01	84	2352	2123	3/22/15	3/4/17	Scaffold	SC	SAMEA1020056	GCA_001088385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/385/GCA_001088385.1_6569_4_3	-	DCC1902
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.29799	64.7	-	CQFS01	237	4484	3905	3/22/15	3/11/17	Scaffold	SC	SAMEA787706	GCA_001149285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/285/GCA_001149285.1_6280_6_4	-	A70086
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.36997	50.5	-	JWZR01	302	5789	5329	1/16/15	2/23/17	Contig	FDA	SAMN03177615	GCA_000819375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/819/375/GCA_000819375.1_Escherichia_coli_CVM_N33429PS_v1.0	26142410	CVM N33429PS
Salmonella enterica subsp. enterica serovar Rubislaw	598	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.9835	52.1	-	MLUQ01	51	5116	4826	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962045	GCA_001833825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/825/GCA_001833825.1_ASM183382v1	-	CFSAN044972
Staphylococcus aureus VET0072R	1422408	PRJNA228498	228498	Terrabacteria group	Firmicutes	2.79091	32.8	-	JIUO01	44	2890	2700	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02403991	GCA_000640855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/855/GCA_000640855.1_Stap_aure_VET0072R_V1	-	VET0072R
Staphylococcus aureus VET0073R	1422409	PRJNA228499	228499	Terrabacteria group	Firmicutes	2.79632	32.8	-	JIUN01	51	2909	2707	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02403992	GCA_000640875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/875/GCA_000640875.1_Stap_aure_VET0073R_V1	-	VET0073R
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70364	52.2	-	MLUR01	49	4781	4516	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962046	GCA_001833855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/855/GCA_001833855.1_ASM183385v1	-	CFSAN044973
Escherichia coli	562	PRJNA261775	261775	Proteobacteria	Gammaproteobacteria	5.12179	50.5777	plasmid pUMNturkey7_IncX:NZ_CM003131.1/CM003131.1	JRRG01	83	5385	5012	1/21/15	2/25/17	Contig	University of Minnesota	SAMN03075673	GCA_000826805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/805/GCA_000826805.1_ASM82680v1	-	UMNturkey7
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.38736	65.6	-	CPWA01	102	4308	4083	3/23/15	3/11/17	Scaffold	SC	SAMEA1317661	GCA_001151685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/685/GCA_001151685.1_7414_6_39	-	402538
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.08783	39.7	-	CPNM01	274	2379	2091	3/23/15	3/4/17	Scaffold	SC	SAMEA1020559	GCA_001088405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/405/GCA_001088405.1_6237_8_15	-	S-106
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10267	39.6	-	CKLD01	74	2304	2030	3/21/15	3/6/17	Scaffold	SC	SAMEA1024119	GCA_001088585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/585/GCA_001088585.1_6641_6_10	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.70302	65.8	-	CQDM01	855	4416	4183	3/22/15	3/11/17	Scaffold	SC	SAMEA1523360	GCA_001155105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/105/GCA_001155105.1_8080_8_8	-	201035
Escherichia coli	562	PRJNA266657	266657	Proteobacteria	Gammaproteobacteria	5.02501	50.6	-	JXUL01	79	5228	4935	2/2/15	2/25/17	Contig	FDA	SAMN03177641	GCA_000831335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/335/GCA_000831335.1_Escherichia_coli_CVM_N34086PS_v1.0	26142410	CVM N34086PS
Salmonella enterica subsp. enterica serovar Braenderup	149391	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.628	52.3	-	MLUS01	25	4662	4453	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962048	GCA_001833885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/885/GCA_001833885.1_ASM183388v1	-	CFSAN044975
Staphylococcus aureus VET0075R	1422410	PRJNA228500	228500	Terrabacteria group	Firmicutes	2.77527	32.9	-	JIUM01	38	2876	2684	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02403993	GCA_000640895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/895/GCA_000640895.1_Stap_aure_VET0075R_V1	-	VET0075R
Staphylococcus aureus VET0076R	1422411	PRJNA228501	228501	Terrabacteria group	Firmicutes	2.74607	32.8	-	JIUL01	31	2815	2634	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02403994	GCA_000640915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/915/GCA_000640915.1_Stap_aure_VET0076R_V1	-	VET0076R
Salmonella enterica subsp. enterica serovar Braenderup	149391	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.7054	52.3	-	MLUT01	25	4771	4561	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962049	GCA_001833895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/895/GCA_001833895.1_ASM183389v1	-	CFSAN044976
Escherichia coli	562	PRJNA256255	256255	Proteobacteria	Gammaproteobacteria	5.54779	50.4	-	JPPP01	236	6027	5405	2/10/15	2/25/17	Contig	"University of Technology, Sydney"	SAMN02941915	GCA_000835045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/835/045/GCA_000835045.1_ASM83504v1	-	O157 SvETEC
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.33547	65.5	-	CQFJ01	177	4312	4036	3/22/15	3/11/17	Scaffold	SC	SAMEA787708	GCA_001155525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/525/GCA_001155525.1_6180_1_5	-	A70088
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.98938	39.7	-	CQQN01	43	2210	2000	3/23/15	3/4/17	Scaffold	SC	SAMEA970208	GCA_001088625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/625/GCA_001088625.1_5159_5_5	-	BHN606
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07573	39.6	-	CKES01	94	2274	2006	3/21/15	3/11/17	Scaffold	SC	SAMEA1023938	GCA_001088785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/785/GCA_001088785.1_6630_2_3	-	22A
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.37188	65.6	-	CQBV01	91	4283	4082	3/23/15	3/11/17	Scaffold	SC	SAMEA1317666	GCA_001155865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/865/GCA_001155865.1_7414_6_21	-	401212
Escherichia coli	562	PRJNA256256	256256	Proteobacteria	Gammaproteobacteria	5.44964	50.7	-	JPQX01	226	5950	5321	2/10/15	2/23/17	Contig	"University of Technology, Sydney"	SAMN02941916	GCA_000835055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/835/055/GCA_000835055.1_734_3	-	O157:K88 734/3
Salmonella enterica subsp. enterica serovar Rubislaw	598	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70312	52.2	-	MLUU01	42	4761	4510	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962050	GCA_001833925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/925/GCA_001833925.1_ASM183392v1	-	CFSAN044977
Staphylococcus aureus VET0077R	1422412	PRJNA228502	228502	Terrabacteria group	Firmicutes	2.8436	33	-	JIUK01	45	2952	2746	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02403995	GCA_000640935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/935/GCA_000640935.1_Stap_aure_VET0077R_V1	-	VET0077R
Staphylococcus aureus VET0080R	1422414	PRJNA228504	228504	Terrabacteria group	Firmicutes	2.7839	32.9	-	JIUI01	40	2874	2695	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02403997	GCA_000640955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/955/GCA_000640955.1_Stap_aure_VET0080R_V1	-	VET0080R
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70301	52.2	-	MLUV01	48	4778	4513	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962052	GCA_001833935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/935/GCA_001833935.1_ASM183393v1	-	CFSAN044979
Escherichia coli	562	PRJNA273275	273275	Proteobacteria	Gammaproteobacteria	4.75451	50.5	-	JXWM01	1173	5674	4658	2/24/15	2/23/17	Contig	Canadian Food Inspection Agency	SAMN03317014	GCA_000932215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/932/215/GCA_000932215.1_ASM93221v1	-	OLC-683
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.29623	64.7	-	CQFY01	377	4548	3813	3/23/15	3/11/17	Scaffold	SC	SAMEA787744	GCA_001155985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/985/GCA_001155985.1_6280_6_7	-	A70136
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.01645	39.6	-	CMKW01	43	2176	1958	3/23/15	3/11/17	Scaffold	SC	SAMEA1029429	GCA_001088825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/825/GCA_001088825.1_7054_5_1	-	SMRU3049
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.02207	39.8	-	CPPM01	62	2224	2009	3/22/15	3/11/17	Scaffold	SC	SAMEA1020231	GCA_001088865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/865/GCA_001088865.1_6289_8_4	-	SN39533
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.37899	65.6	-	CPWO01	87	4292	4108	3/23/15	3/11/17	Scaffold	SC	SAMEA1317632	GCA_001157085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/085/GCA_001157085.1_7414_6_33	-	301310
Escherichia coli	562	PRJNA273259	273259	Proteobacteria	Gammaproteobacteria	5.30324	50.4	-	JXUS01	242	5712	5279	2/26/15	2/23/17	Contig	Canadian Food Inspection Agency	SAMN03322683	GCA_000934865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/865/GCA_000934865.1_ASM93486v1	26205873	ATCC 35150
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70088	52.2	-	MLUW01	42	4767	4516	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962053	GCA_001833965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/965/GCA_001833965.1_ASM183396v1	-	CFSAN044980
Staphylococcus aureus VET0083R	1422416	PRJNA228506	228506	Terrabacteria group	Firmicutes	2.75785	32.8	-	JIUG01	28	2862	2682	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02403999	GCA_000640975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/975/GCA_000640975.1_Stap_aure_VET0083R_V1	-	VET0083R
Staphylococcus aureus VET0084R	1422417	PRJNA228507	228507	Terrabacteria group	Firmicutes	2.80464	32.9	-	JIUF01	43	2908	2712	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404000	GCA_000640995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/640/995/GCA_000640995.1_Stap_aure_VET0084R_V1	-	VET0084R
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70248	52.2	-	MLUY01	48	4769	4517	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962086	GCA_001833975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/833/975/GCA_001833975.1_ASM183397v1	-	CFSAN044984
Escherichia coli	562	PRJNA273259	273259	Proteobacteria	Gammaproteobacteria	5.32456	50.3	-	JYIO01	143	5715	5300	2/27/15	2/23/17	Contig	Canadian Food Inspection Agency	SAMN03342207	GCA_000935075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/075/GCA_000935075.1_ASM93507v1	26205873	ATCC 35150 NalR
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.2968	64.6	-	CQFC01	513	4595	3791	3/23/15	3/11/17	Scaffold	SC	SAMEA787709	GCA_001158445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/445/GCA_001158445.1_6280_6_3	-	A70067_1
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.05077	39.7	-	CMMZ01	51	2260	2035	3/23/15	3/11/17	Scaffold	SC	SAMEA1029350	GCA_001088905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/905/GCA_001088905.1_7092_6_10	-	SMRU3106
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1155	39.6	-	CLIY01	54	2304	2045	3/21/15	3/11/17	Scaffold	SC	SAMEA1026228	GCA_001088925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/925/GCA_001088925.1_6925_6_9	-	SMRU2193
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.31191	65.4	-	CQGA01	205	4337	4045	3/22/15	3/11/17	Scaffold	SC	SAMEA787724	GCA_001160825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/825/GCA_001160825.1_6180_2_2	-	A70661
Escherichia coli	562	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	4.93974	50.5	-	JYIB01	296	5218	4789	3/2/15	2/23/17	Contig	CDC	SAMN03333487	GCA_000935345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/345/GCA_000935345.1_ASM93534v1	26044422	K1506-c2
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.7017	52.2	-	MLVA01	45	4767	4518	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962088	GCA_001834005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/005/GCA_001834005.1_ASM183400v1	-	CFSAN044986
Staphylococcus aureus VET0085R	1422418	PRJNA228508	228508	Terrabacteria group	Firmicutes	2.80485	32.9	-	JIUE01	43	2909	2710	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404001	GCA_000641015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/015/GCA_000641015.1_Stap_aure_VET0085R_V1	-	VET0085R
Staphylococcus aureus VET0086R	1422419	PRJNA228509	228509	Terrabacteria group	Firmicutes	2.75673	32.8	-	JIUD01	30	2866	2682	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404002	GCA_000641035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/035/GCA_000641035.1_Stap_aure_VET0086R_V1	-	VET0086R
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.7017	52.2	-	MLVC01	43	4760	4515	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962091	GCA_001834015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/015/GCA_001834015.1_ASM183401v1	-	CFSAN044989
Escherichia coli	562	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	4.95495	50.4	-	JYHX01	371	5310	4808	3/2/15	2/25/17	Contig	CDC	SAMN03333429	GCA_000935365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/365/GCA_000935365.1_ASM93536v1	26044422	F526
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.25441	65.4	-	CQSD01	222	4275	3926	3/22/15	3/11/17	Scaffold	SC	SAMEA1706679	GCA_001162825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/825/GCA_001162825.1_5227_6_10	-	O09700920
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1347	39.4	-	CLAI01	67	2338	2103	3/21/15	3/14/17	Scaffold	SC	SAMEA1025745	GCA_001088945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/945/GCA_001088945.1_6840_3_9	-	SMRU1809
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.23271	39.4	-	CILZ01	128	2488	2215	3/21/15	3/11/17	Scaffold	SC	SAMEA1023967	GCA_001089005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/005/GCA_001089005.1_6630_2_2	-	6B
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.29356	65.3	-	CQEZ01	291	4374	3923	3/23/15	3/11/17	Scaffold	SC	SAMEA787736	GCA_001163125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/125/GCA_001163125.1_6280_7_4	-	A70280
Escherichia coli	562	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	4.94747	50.4	-	JYIE01	309	5281	4813	3/2/15	2/25/17	Contig	CDC	SAMN03333592	GCA_000935375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/375/GCA_000935375.1_ASM93537v1	26044422	2014EL-1181-1
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.1087	51.9	-	MLVD01	41	5277	5004	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962092	GCA_001834045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/045/GCA_001834045.1_ASM183404v1	-	CFSAN044990
Staphylococcus aureus VET0087R	1422420	PRJNA228510	228510	Terrabacteria group	Firmicutes	2.7392	32.9	-	JIUC01	26	2830	2657	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404003	GCA_000641055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/055/GCA_000641055.1_Stap_aure_VET0087R_V1	-	VET0087R
Staphylococcus aureus VET0088R	1422421	PRJNA228511	228511	Terrabacteria group	Firmicutes	2.80608	32.9	-	JIUB01	59	2916	2703	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404004	GCA_000641075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/075/GCA_000641075.1_Stap_aure_VET0088R_V1	-	VET0088R
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.10791	51.9	-	MLVE01	37	5283	5007	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962093	GCA_001834055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/055/GCA_001834055.1_ASM183405v1	-	CFSAN044991
Escherichia coli	562	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	4.95447	50.4	-	JYHY01	296	5330	4826	3/2/15	2/25/17	Contig	CDC	SAMN03333431	GCA_000935425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/425/GCA_000935425.1_ASM93542v1	26044422	F736-c1
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.29997	65.3	-	CQSW01	301	4382	4057	3/23/15	3/11/17	Scaffold	SC	SAMEA968213	GCA_001164205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/205/GCA_001164205.1_5237_5_5	-	I09601853
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.02347	39.7	-	CKEX01	79	2221	2008	3/21/15	3/11/17	Scaffold	SC	SAMEA1024116	GCA_001089025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/025/GCA_001089025.1_6630_2_8	-	11A
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11311	39.5	-	CMRA01	106	2345	2101	3/22/15	3/11/17	Scaffold	SC	SAMEA2061742	GCA_001089045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/045/GCA_001089045.1_9803_8_31	-	23F
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.25408	64.8	-	CQFZ01	197	4426	3893	3/23/15	3/11/17	Scaffold	SC	SAMEA787705	GCA_001165005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/005/GCA_001165005.1_6280_6_5	-	A70011_3
Escherichia coli	562	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	4.90243	50.6	-	JYID01	335	5179	4748	3/2/15	2/23/17	Contig	CDC	SAMN03333573	GCA_000935435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/435/GCA_000935435.1_ASM93543v1	26044422	B144-c1
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.10674	51.9	-	MLVF01	37	5275	5003	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962094	GCA_001834085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/085/GCA_001834085.1_ASM183408v1	-	CFSAN044992
Staphylococcus aureus VET0089R	1422422	PRJNA228512	228512	Terrabacteria group	Firmicutes	2.84755	32.9	-	JIUA01	20	2969	2789	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404005	GCA_000641095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/095/GCA_000641095.1_Stap_aure_VET0089R_V1	-	VET0089R
Staphylococcus aureus VET0090R	1422423	PRJNA228513	228513	Terrabacteria group	Firmicutes	2.82816	32.9	-	JITZ01	40	2954	2764	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404006	GCA_000641115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/115/GCA_000641115.1_Stap_aure_VET0090R_V1	-	VET0090R
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.20859	52	-	MLVG01	59	5436	5145	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962095	GCA_001834095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/095/GCA_001834095.1_ASM183409v1	-	CFSAN044993
Escherichia coli	562	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	4.99334	50.5	-	JYIC01	287	5325	4839	3/2/15	2/23/17	Contig	CDC	SAMN03333572	GCA_000935445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/445/GCA_000935445.1_ASM93544v1	26044422	K1884 sc
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.23688	65.3	-	CQSK01	293	4322	4028	3/23/15	3/11/17	Scaffold	SC	SAMEA1706699	GCA_001165085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/085/GCA_001165085.1_5227_7_4	-	O09801359
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.9937	39.7	-	CIMB01	92	2205	1965	3/21/15	3/11/17	Scaffold	SC	SAMEA1023664	GCA_001089085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/085/GCA_001089085.1_6630_4_4	-	35C
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04098	39.6	-	CIME01	63	2230	2013	3/21/15	3/11/17	Scaffold	SC	SAMEA1023775	GCA_001089125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/125/GCA_001089125.1_6631_4_8	-	7F
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.37616	65.6	-	CPYC01	93	4296	4116	3/23/15	3/11/17	Scaffold	SC	SAMEA1317658	GCA_001166245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/245/GCA_001166245.1_7414_6_16	-	402106
Escherichia coli	562	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	4.34444	50.7	-	JYHZ01	513	4768	4150	3/2/15	2/23/17	Contig	CDC	SAMN03333433	GCA_000935475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/475/GCA_000935475.1_ASM93547v1	-	F2626
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70125	52.2	-	MLVH01	43	4765	4513	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962096	GCA_001834125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/125/GCA_001834125.1_ASM183412v1	-	CFSAN044994
Staphylococcus aureus VET0091R	1422424	PRJNA228514	228514	Terrabacteria group	Firmicutes	2.82011	32.8	-	JITY01	42	2946	2752	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404007	GCA_000641135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/135/GCA_000641135.1_Stap_aure_VET0091R_V1	-	VET0091R
Staphylococcus aureus VET0092R	1422425	PRJNA228515	228515	Terrabacteria group	Firmicutes	2.82916	32.9	-	JITX01	45	2957	2762	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404008	GCA_000641155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/155/GCA_000641155.1_Stap_aure_VET0092R_V1	-	VET0092R
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.2079	52	-	MLVI01	54	5429	5151	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962097	GCA_001834145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/145/GCA_001834145.1_ASM183414v1	-	CFSAN044995
Escherichia coli	562	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.02747	50.7	-	JYIA01	258	5300	4949	3/2/15	2/23/17	Contig	CDC	SAMN03333464	GCA_000935505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/505/GCA_000935505.1_ASM93550v1	26044422	F6700
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.2461	65.4	-	CQSI01	370	4329	4018	3/23/15	3/11/17	Scaffold	SC	SAMEA1706692	GCA_001166845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/845/GCA_001166845.1_5227_7_6	-	O09501089
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.2215	39.4	-	CKYZ01	96	2433	2201	3/21/15	3/11/17	Scaffold	SC	SAMEA1025913	GCA_001089145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/145/GCA_001089145.1_6840_1_18	-	SMRU1770
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11976	39.6	-	CLGD01	53	2353	2110	3/21/15	3/11/17	Scaffold	SC	SAMEA1025842	GCA_001089165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/165/GCA_001089165.1_6925_3_3	-	SMRU2115
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.21089	65.2	-	CQPM01	928	4559	3920	3/23/15	3/11/17	Scaffold	SC	SAMEA1706704	GCA_001167185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/185/GCA_001167185.1_4925_1_1	-	B00801080
Escherichia coli	562	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	4.77457	50.5	-	JYIF01	276	5027	4599	3/2/15	2/23/17	Contig	CDC	SAMN03333593	GCA_000935515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/515/GCA_000935515.1_ASM93551v1	26044422	B1020-2
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.01941	52.1	-	MLVL01	44	5184	4868	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962100	GCA_001834155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/155/GCA_001834155.1_ASM183415v1	-	CFSAN044998
Staphylococcus aureus VET0093R	1422426	PRJNA228516	228516	Terrabacteria group	Firmicutes	2.84015	32.9	-	JITW01	49	2979	2783	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404009	GCA_000641175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/175/GCA_000641175.1_Stap_aure_VET0093R_V1	-	VET0093R
Staphylococcus aureus VET0094R	1422427	PRJNA228517	228517	Terrabacteria group	Firmicutes	2.82762	32.9	-	JITV01	36	2959	2774	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404010	GCA_000641195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/195/GCA_000641195.1_Stap_aure_VET0094R_V1	-	VET0094R
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93342	52.1	-	MLVM01	25	5065	4775	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962101	GCA_001834175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/175/GCA_001834175.1_ASM183417v1	-	CFSAN044999
Escherichia coli	562	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	4.9087	50.5	-	JYIH01	356	5311	4798	3/2/15	2/23/17	Contig	CDC	SAMN03334847	GCA_000935525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/525/GCA_000935525.1_ASM93552v1	26044422	F6339-c9
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36344	65.6	-	CQCX01	111	4292	4086	3/23/15	3/11/17	Scaffold	SC	SAMEA1523367	GCA_001168805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/805/GCA_001168805.1_8080_8_36	-	1700745
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.25054	39.5	-	CMDW01	95	2483	2228	3/21/15	3/11/17	Scaffold	SC	SAMEA1028811	GCA_001089185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/185/GCA_001089185.1_7011_4_12	-	SMRU2772
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.05458	39.7	-	CPPY01	121	2222	2010	3/23/15	3/11/17	Scaffold	SC	SAMEA769985	GCA_001089265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/265/GCA_001089265.1_5242_3_12	-	14/4
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.38928	65.6	-	CQEG01	62	4307	4126	3/23/15	3/11/17	Scaffold	SC	SAMEA1317677	GCA_001169425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/425/GCA_001169425.1_9278_1_11	-	401063
Escherichia coli	562	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	4.87598	50.6	-	JYIG01	287	5173	4734	3/2/15	2/23/17	Contig	CDC	SAMN03334835	GCA_000935555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/555/GCA_000935555.1_ASM93555v1	26044422	F5524-c2
Salmonella enterica subsp. enterica serovar Inverness	913074	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.01927	52.1	-	MLVN01	46	5182	4874	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962102	GCA_001834205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/205/GCA_001834205.1_ASM183420v1	-	CFSAN045000
Staphylococcus aureus VET0095R	1422428	PRJNA228518	228518	Terrabacteria group	Firmicutes	2.87828	32.9	-	JITU01	40	3004	2812	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404011	GCA_000641215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/215/GCA_000641215.1_Stap_aure_VET0095R_V1	-	VET0095R
Staphylococcus aureus VET0097R	1422429	PRJNA228519	228519	Terrabacteria group	Firmicutes	2.76809	32.8	-	JITT01	37	2837	2679	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404012	GCA_000641235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/235/GCA_000641235.1_Stap_aure_VET0097R_V1	-	VET0097R
Salmonella enterica subsp. enterica serovar Bareilly	58096	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.78411	52	-	MLVO01	46	4932	4642	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962103	GCA_001834225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/225/GCA_001834225.1_ASM183422v1	-	CFSAN045001
Escherichia coli	562	PRJEB5989	276424	Proteobacteria	Gammaproteobacteria	5.36908	50.9	-	CCBY01	715	5979	5127	2/24/15	2/23/17	Contig	CGS-GL	SAMEA2469794	GCA_000936105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/105/GCA_000936105.1_Ec57A_A8_MIRA_assembly	-	-
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.23783	65.2	-	CQQI01	482	4429	3991	3/23/15	3/11/17	Scaffold	SC	SAMEA968078	GCA_001169865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/865/GCA_001169865.1_4948_5_9	-	B09601926
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11069	39.5	-	CKDY01	79	2312	2072	3/21/15	3/14/17	Scaffold	SC	SAMEA1023820	GCA_001089305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/305/GCA_001089305.1_6630_1_24	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.05484	39.6	-	CMIP01	54	2219	1989	3/23/15	3/11/17	Scaffold	SC	SAMEA1029281	GCA_001089385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/385/GCA_001089385.1_7038_7_13	-	SMRU3013
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.25742	65.3	-	CQTV01	552	4483	3985	3/23/15	3/11/17	Scaffold	SC	SAMEA968203	GCA_001170265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/265/GCA_001170265.1_5237_7_2	-	S00600351
Escherichia coli	562	PRJEB8306	276436	Proteobacteria	Gammaproteobacteria	5.51651	50.7	-	CDRL01	721	6034	5242	2/24/15	2/23/17	Contig	CGS-GL	SAMEA3218069	GCA_000936455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/455/GCA_000936455.1_46A_S2_assembly	-	46A_S2
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.17706	52	-	MLVP01	55	5385	5102	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962104	GCA_001834245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/245/GCA_001834245.1_ASM183424v1	-	CFSAN045002
Staphylococcus aureus VET0098R	1422430	PRJNA228520	228520	Terrabacteria group	Firmicutes	2.85657	32.9	-	JITS01	40	2981	2794	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404013	GCA_000641255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/255/GCA_000641255.1_Stap_aure_VET0098R_V1	-	VET0098R
Staphylococcus aureus VET0099R	1422431	PRJNA228521	228521	Terrabacteria group	Firmicutes	2.84995	32.9	-	JITR01	45	2973	2793	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404014	GCA_000641275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/275/GCA_000641275.1_Stap_aure_VET0099R_V1	-	VET0099R
Salmonella enterica subsp. enterica serovar Bareilly	58096	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.78198	52	-	MLVQ01	43	4925	4639	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962105	GCA_001834255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/255/GCA_001834255.1_ASM183425v1	-	CFSAN045003
Escherichia coli	562	PRJEB8306	276436	Proteobacteria	Gammaproteobacteria	5.43935	50.9	-	CDRV01	689	6108	5117	2/24/15	2/23/17	Contig	CGS-GL	SAMEA3218068	GCA_000937355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/355/GCA_000937355.1_46A_L2_assembly	-	46A_L2
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.2433	65.2	-	CQQA01	393	4361	4019	3/22/15	3/11/17	Scaffold	SC	SAMEA968086	GCA_001170685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/685/GCA_001170685.1_4948_5_7	-	A00500149
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12468	39.6	-	CMNN01	63	2358	2109	3/22/15	3/11/17	Scaffold	SC	SAMEA1029432	GCA_001089405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/405/GCA_001089405.1_7092_6_6	-	SMRU3102
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07948	39.6	-	CKDR01	81	2291	2039	3/21/15	3/11/17	Scaffold	SC	SAMEA1024008	GCA_001089425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/425/GCA_001089425.1_6630_1_16	-	14
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36314	65.6	-	CPXC01	122	4287	4081	3/23/15	3/11/17	Scaffold	SC	SAMEA1523352	GCA_001172005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/005/GCA_001172005.1_8080_8_33	-	1700284
Escherichia coli	562	PRJEB5989	276424	Proteobacteria	Gammaproteobacteria	5.41031	50.8	-	CCBS01	656	6008	5097	2/24/15	2/23/17	Contig	CGS-GL	SAMEA2469786	GCA_000938175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/175/GCA_000938175.1_Ec46A_L1_MIRA_assembly	-	-
Salmonella enterica subsp. enterica serovar Rubislaw	598	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.91498	52.1	-	MLVR01	73	5025	4725	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962107	GCA_001834285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/285/GCA_001834285.1_ASM183428v1	-	CFSAN045005
Staphylococcus aureus VET0101R	1422432	PRJNA228522	228522	Terrabacteria group	Firmicutes	2.75707	32.8	-	JITQ01	39	2852	2667	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404015	GCA_000641295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/295/GCA_000641295.1_Stap_aure_VET0101R_V1	-	VET0101R
Staphylococcus aureus VET0103R	1422434	PRJNA228524	228524	Terrabacteria group	Firmicutes	2.75384	32.8	-	JITO01	32	2846	2661	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404017	GCA_000641315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/315/GCA_000641315.1_Stap_aure_VET0103R_V1	-	VET0103R
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70246	52.2	-	MLVT01	43	4768	4512	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962111	GCA_001834305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/305/GCA_001834305.1_ASM183430v1	-	CFSAN045009
Escherichia coli	562	PRJEB5989	276424	Proteobacteria	Gammaproteobacteria	5.27583	51.1	-	CCBW01	650	5838	5085	2/24/15	2/23/17	Contig	CGS-GL	SAMEA2469792	GCA_000939035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/035/GCA_000939035.1_Ec26A_L2_MIRA_assembly	-	-
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.32786	65.4	-	CQEY01	176	4306	4018	3/23/15	3/11/17	Scaffold	SC	SAMEA787730	GCA_001172585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/585/GCA_001172585.1_6180_2_6	-	A70763_1
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05727	39.5	-	CLTW01	74	2265	2042	3/21/15	3/11/17	Scaffold	SC	SAMEA1029096	GCA_001089485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/485/GCA_001089485.1_6972_5_18	-	SMRU2634
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.21272	39.6	-	CLSF01	72	2450	2212	3/21/15	3/11/17	Scaffold	SC	SAMEA1028810	GCA_001089505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/505/GCA_001089505.1_6972_3_21	-	SMRU2589
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36144	65.6	-	CQDF01	99	4289	4080	3/23/15	3/11/17	Scaffold	SC	SAMEA1317645	GCA_001172865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/865/GCA_001172865.1_7414_6_54	-	402248
Escherichia coli	562	PRJEB8306	276436	Proteobacteria	Gammaproteobacteria	5.41926	50.8	-	CDRS01	674	6030	5104	2/24/15	2/23/17	Contig	CGS-GL	SAMEA3218067	GCA_000939135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/135/GCA_000939135.1_46A_L1_assembly	-	46A_L1
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.17628	52	-	MLVU01	55	5383	5101	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962112	GCA_001834325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/325/GCA_001834325.1_ASM183432v1	-	CFSAN045010
Staphylococcus aureus VET0104R	1422435	PRJNA228525	228525	Terrabacteria group	Firmicutes	2.76146	32.9	-	JITN01	31	2858	2678	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404018	GCA_000641335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/335/GCA_000641335.1_Stap_aure_VET0104R_V1	-	VET0104R
Staphylococcus aureus VET0105R	1422436	PRJNA228526	228526	Terrabacteria group	Firmicutes	2.85499	32.9	-	JITM01	63	3007	2808	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404019	GCA_000641355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/355/GCA_000641355.1_Stap_aure_VET0105R_V1	-	VET0105R
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.10027	51.5	-	MLWA01	56	5083	4708	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962145	GCA_001834335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/335/GCA_001834335.1_ASM183433v1	-	CFSAN045023
Escherichia coli	562	PRJEB5989	276424	Proteobacteria	Gammaproteobacteria	5.51714	50.7	-	CCBT01	724	5999	5233	2/24/15	2/23/17	Contig	CGS-GL	SAMEA2469788	GCA_000939335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/335/GCA_000939335.1_Ec46A_S2_MIRA_assembly	-	-
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.35937	65.6	-	CQCK01	109	4292	4080	3/23/15	3/11/17	Scaffold	SC	SAMEA1317644	GCA_001173105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/105/GCA_001173105.1_7414_6_27	-	302642
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12768	39.6	-	CLSJ01	44	2365	2138	3/21/15	3/11/17	Scaffold	SC	SAMEA1028883	GCA_001089585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/585/GCA_001089585.1_6972_3_6	-	SMRU2574
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.13614	39.6	-	CLQF01	86	2376	2131	3/21/15	3/4/17	Scaffold	SC	SAMEA1028982	GCA_001089605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/605/GCA_001089605.1_6949_4_12	-	SMRU2484
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36217	65.6	-	CPXE01	107	4294	4083	3/22/15	3/11/17	Scaffold	SC	SAMEA1317633	GCA_001174265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/265/GCA_001174265.1_7414_6_48	-	301747
Escherichia coli	562	PRJEB8306	276436	Proteobacteria	Gammaproteobacteria	5.15842	51.1	-	CDRC01	1271	6011	4924	2/24/15	2/23/17	Contig	CGS-GL	SAMEA3218071	GCA_000939695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/695/GCA_000939695.1_4d11B_assembly	-	4d11B
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.02656	52.1	-	MLWE01	38	5147	4891	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962151	GCA_001834365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/365/GCA_001834365.1_ASM183436v1	-	CFSAN045029
Staphylococcus aureus VET0107R	1422437	PRJNA228528	228528	Terrabacteria group	Firmicutes	2.81602	32.9	-	JITL01	47	2926	2742	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404020	GCA_000641375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/375/GCA_000641375.1_Stap_aure_VET0107R_V1	-	VET0107R
Staphylococcus aureus VET0110R	1422438	PRJNA228529	228529	Terrabacteria group	Firmicutes	2.78932	32.9	-	JITK01	35	2875	2695	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404021	GCA_000641395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/395/GCA_000641395.1_Stap_aure_VET0110R_V1	-	VET0110R
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70392	52.2	-	MLWF01	45	4774	4515	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962153	GCA_001834385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/385/GCA_001834385.1_ASM183438v1	-	CFSAN045031
Escherichia coli	562	PRJEB8306	276436	Proteobacteria	Gammaproteobacteria	5.14896	51	-	CDRR01	871	6105	4727	2/24/15	2/23/17	Contig	CGS-GL	SAMEA3218062	GCA_000940455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/455/GCA_000940455.1_138B_L2_assembly	-	138B_L2
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.24421	65.2	-	CQRU01	625	4517	3970	3/22/15	3/11/17	Scaffold	SC	SAMEA1706681	GCA_001174865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/865/GCA_001174865.1_5227_5_3	-	J09402203
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99276	39.8	-	CQQP01	40	2217	1991	3/22/15	3/6/17	Scaffold	SC	SAMEA970214	GCA_001089685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/685/GCA_001089685.1_5159_6_10	-	BHN623
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.22656	39.5	-	CPRB01	89	2465	2214	3/22/15	3/4/17	Scaffold	SC	SAMEA1408274	GCA_001089745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/745/GCA_001089745.1_7444_8_23	-	9802+26112
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.29399	65.4	-	CRZG01	185	4297	4031	3/23/15	3/11/17	Scaffold	SC	SAMEA968157	GCA_001191715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/715/GCA_001191715.1_5505_8_8	-	P00401210
Escherichia coli	562	PRJEB5989	276424	Proteobacteria	Gammaproteobacteria	5.41568	50.9	-	CCBR01	660	6046	5108	2/24/15	2/23/17	Contig	CGS-GL	SAMEA2469787	GCA_000940555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/555/GCA_000940555.1_Ec46A_L2_MIRA_assembly	-	-
Salmonella enterica subsp. enterica serovar Bareilly	58096	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.76846	52	-	MLWG01	50	4914	4624	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962155	GCA_001834405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/405/GCA_001834405.1_ASM183440v1	-	CFSAN045033
Staphylococcus aureus VET0112R	1422440	PRJNA228531	228531	Terrabacteria group	Firmicutes	2.76687	32.9	-	JITI01	35	2853	2684	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404023	GCA_000641415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/415/GCA_000641415.1_Stap_aure_VET0112R_V1	-	VET0112R
Staphylococcus aureus VET0114R	1422442	PRJNA228533	228533	Terrabacteria group	Firmicutes	2.8441	32.9	-	JITG01	59	2977	2773	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404025	GCA_000641435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/435/GCA_000641435.1_Stap_aure_VET0114R_V1	-	VET0114R
Salmonella enterica subsp. enterica serovar Bareilly	58096	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.78403	52	-	MLWH01	50	4931	4641	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962156	GCA_001834415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/415/GCA_001834415.1_ASM183441v1	-	CFSAN045034
Escherichia coli	562	PRJEB8306	276436	Proteobacteria	Gammaproteobacteria	5.38078	50.9	-	CDRQ01	729	5975	5134	2/24/15	2/23/17	Contig	CGS-GL	SAMEA3218060	GCA_000941195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/195/GCA_000941195.1_57A_A8_assembly	-	57A_A8
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.28561	65.4	-	CRYZ01	322	4382	4057	3/23/15	3/11/17	Scaffold	SC	SAMEA968142	GCA_001191955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/955/GCA_001191955.1_5319_2_9	-	N00200616
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07054	39.7	-	CKQN01	61	2280	2060	3/21/15	3/4/17	Scaffold	SC	SAMEA1024918	GCA_001089765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/765/GCA_001089765.1_6680_7_18	-	SMRU978
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.14341	39.6	-	CKUC01	52	2383	2153	3/21/15	3/4/17	Scaffold	SC	SAMEA1025695	GCA_001089965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/965/GCA_001089965.1_6823_2_21	-	SMRU1893
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.3085	65.4	-	CRYT01	369	4414	4088	3/23/15	3/11/17	Scaffold	SC	SAMEA968179	GCA_001192435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/435/GCA_001192435.1_5319_2_1	-	N00500166
Escherichia coli	562	PRJEB8306	276436	Proteobacteria	Gammaproteobacteria	5.23247	51.3	-	CDQY01	958	5940	4940	2/24/15	2/23/17	Contig	CGS-GL	SAMEA3218072	GCA_000941535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/535/GCA_000941535.1_2d8A_assembly	-	2d8A
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70171	52.2	-	MLWI01	46	4771	4512	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962159	GCA_001834445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/445/GCA_001834445.1_ASM183444v1	-	CFSAN045037
Staphylococcus aureus VET0115R	1422443	PRJNA228534	228534	Terrabacteria group	Firmicutes	2.81594	32.9	-	JITF01	48	2948	2744	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404026	GCA_000641455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/455/GCA_000641455.1_Stap_aure_VET0115R_V1	-	VET0115R
Staphylococcus aureus VET0116R	1422444	PRJNA228535	228535	Terrabacteria group	Firmicutes	2.80224	32.9	-	JITE01	47	2938	2741	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404027	GCA_000641475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/475/GCA_000641475.1_Stap_aure_VET0116R_V1	-	VET0116R
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70262	52.2	-	MLWJ01	44	4777	4516	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962161	GCA_001834465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/465/GCA_001834465.1_ASM183446v1	-	CFSAN045039
Escherichia coli	562	PRJEB5989	276424	Proteobacteria	Gammaproteobacteria	5.15034	51	-	CCBZ01	897	6102	4719	2/24/15	2/23/17	Contig	CGS-GL	SAMEA2469790	GCA_000942815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/942/815/GCA_000942815.1_Ec138B_L2_MIRA_assembly	-	-
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.31137	65.3	-	CQTI01	255	4350	4065	3/23/15	3/10/17	Scaffold	SC	SAMEA968204	GCA_001192515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/515/GCA_001192515.1_5237_6_10	-	R09500614
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12064	39.5	-	CKZQ01	68	2333	2100	3/21/15	3/4/17	Scaffold	SC	SAMEA1026160	GCA_001090005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/005/GCA_001090005.1_6840_1_7	-	SMRU1759
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.15288	39.6	-	CPSW01	312	2315	2135	3/23/15	3/4/17	Scaffold	SC	SAMEA682260	GCA_001090025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/025/GCA_001090025.1_5392_5_11	-	spnIC48
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.20024	65.1	-	CQUB01	911	4589	3871	3/22/15	3/10/17	Scaffold	SC	SAMEA968177	GCA_001192575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/575/GCA_001192575.1_5237_8_10	-	M09500081
Escherichia coli	562	PRJEB5989	276424	Proteobacteria	Gammaproteobacteria	5.21713	51.4	-	CCBX01	827	5920	4981	2/24/15	2/23/17	Contig	CGS-GL	SAMEA2469791	GCA_000946315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/315/GCA_000946315.1_Ec26A_L1_MIRA_assembly	-	-
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70238	52.2	-	MLWK01	46	4774	4514	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962162	GCA_001834485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/485/GCA_001834485.1_ASM183448v1	-	CFSAN045040
Staphylococcus aureus VET0117R	1422445	PRJNA228536	228536	Terrabacteria group	Firmicutes	2.81525	32.8	-	JITD01	39	2954	2757	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404028	GCA_000641495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/495/GCA_000641495.1_Stap_aure_VET0117R_V1	-	VET0117R
Staphylococcus aureus VET0119R	1422446	PRJNA228537	228537	Terrabacteria group	Firmicutes	2.7707	32.8	-	JITC01	29	2876	2689	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404029	GCA_000641515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/515/GCA_000641515.1_Stap_aure_VET0119R_V1	-	VET0119R
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70303	52.2	-	MLWL01	46	4771	4516	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962164	GCA_001834495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/495/GCA_001834495.1_ASM183449v1	-	CFSAN045042
Escherichia coli	562	PRJEB8306	276436	Proteobacteria	Gammaproteobacteria	5.21714	51.5	-	CDRU01	823	5932	5005	2/24/15	2/23/17	Contig	CGS-GL	SAMEA3218065	GCA_000946335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/335/GCA_000946335.1_26A_L1_assembly	-	26A_L1
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.29211	65.3	-	CRZV01	241	4332	4066	3/23/15	3/10/17	Scaffold	SC	SAMEA968129	GCA_001193015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/015/GCA_001193015.1_5505_8_1	-	N09901607
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08268	39.5	-	CMAR01	47	2306	2071	3/21/15	3/4/17	Scaffold	SC	SAMEA1028606	GCA_001090125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/125/GCA_001090125.1_7004_6_26	-	SMRU2834
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21718	39.5	-	CPQL01	109	2471	2212	3/23/15	3/4/17	Scaffold	SC	SAMEA1408332	GCA_001090145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/145/GCA_001090145.1_7444_8_50	-	0101+26271
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.32299	65.4	-	CQTY01	283	4346	4025	3/22/15	3/10/17	Scaffold	SC	SAMEA968190	GCA_001193075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/075/GCA_001193075.1_5237_7_6	-	T09901127
Escherichia coli	562	PRJEB8306	276436	Proteobacteria	Gammaproteobacteria	4.84729	51.5	-	CDRI01	933	5534	4567	2/24/15	2/23/17	Contig	CGS-GL	SAMEA3218070	GCA_000946855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/855/GCA_000946855.1_2d11B_assembly	-	2d11B
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70266	52.2	-	MLWM01	44	4776	4515	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962165	GCA_001834525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/525/GCA_001834525.1_ASM183452v1	-	CFSAN045043
Staphylococcus aureus VET0123R	1422448	PRJNA228539	228539	Terrabacteria group	Firmicutes	2.80869	32.8	-	JITA01	40	2905	2713	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404031	GCA_000641535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/535/GCA_000641535.1_Stap_aure_VET0123R_V1	-	VET0123R
Staphylococcus aureus VET0124R	1422449	PRJNA228540	228540	Terrabacteria group	Firmicutes	2.79643	32.8	-	JISZ01	41	2905	2715	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404032	GCA_000641555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/555/GCA_000641555.1_Stap_aure_VET0124R_V1	-	VET0124R
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70287	52.2	-	MLWN01	42	4775	4516	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962166	GCA_001834535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/535/GCA_001834535.1_ASM183453v1	-	CFSAN045044
Escherichia coli	562	PRJEB8306	276436	Proteobacteria	Gammaproteobacteria	5.46083	51.3	-	CDRA01	1348	6349	5027	2/24/15	2/23/17	Contig	CGS-GL	SAMEA3218073	GCA_000947375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/375/GCA_000947375.1_4e8A_assembly	-	4e8A
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.25245	65.2	-	CQRZ01	491	4458	3972	3/23/15	3/10/17	Scaffold	SC	SAMEA1706663	GCA_001193195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/195/GCA_001193195.1_5227_5_9	-	J09701231
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11146	39.5	-	CKKU01	47	2333	2114	3/21/15	3/11/17	Scaffold	SC	SAMEA1023672	GCA_001090205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/205/GCA_001090205.1_6631_7_19	-	23F
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.05638	39.8	-	CPOX01	237	2219	2039	3/22/15	3/11/17	Scaffold	SC	SAMEA682596	GCA_001090245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/245/GCA_001090245.1_5381_3_8	-	09B07685
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.30267	65.4	-	CQSY01	247	4338	4072	3/23/15	3/10/17	Scaffold	SC	SAMEA1706686	GCA_001193775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/775/GCA_001193775.1_5227_8_8	-	Q09600750
Escherichia coli	562	PRJNA261490	261490	Proteobacteria	Gammaproteobacteria	5.25864	50.6	-	JRJF01	231	5593	5208	3/5/15	2/23/17	Contig	unverisity medical center groningen	SAMN03074547	GCA_000947945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/945/GCA_000947945.1_ASM94794v1	25656624	338
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70095	52.2	-	MLWO01	42	4772	4517	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962167	GCA_001834565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/565/GCA_001834565.1_ASM183456v1	-	CFSAN045045
Staphylococcus aureus VET0126R	1422451	PRJNA228542	228542	Terrabacteria group	Firmicutes	2.78432	32.8	-	JISX01	49	2871	2696	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404034	GCA_000641575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/575/GCA_000641575.1_Stap_aure_VET0126R_V1	-	VET0126R
Staphylococcus aureus VET0127R	1422452	PRJNA228543	228543	Terrabacteria group	Firmicutes	2.78691	32.8	-	JISW01	38	2886	2701	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404035	GCA_000641595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/595/GCA_000641595.1_Stap_aure_VET0127R_V1	-	VET0127R
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.02478	52.1	-	MLWP01	38	5154	4895	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962168	GCA_001834575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/575/GCA_001834575.1_ASM183457v1	-	CFSAN045046
Escherichia coli	562	PRJNA261490	261490	Proteobacteria	Gammaproteobacteria	5.33352	50.6	-	JRKE01	187	5690	5282	3/5/15	2/23/17	Contig	unverisity medical center groningen	SAMN03075177	GCA_000947975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/975/GCA_000947975.1_ASM94797v1	25656624	7N
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.24758	65.4	-	CQSG01	262	4292	4025	3/23/15	3/11/17	Scaffold	SC	SAMEA1706696	GCA_001193955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/955/GCA_001193955.1_5227_7_5	-	O00401640
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.16413	39.5	-	CKAA01	68	2385	2146	3/21/15	3/11/17	Scaffold	SC	SAMEA974686	GCA_001090465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/465/GCA_001090465.1_6259_5_6	-	7B
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.18319	39.6	-	CLDF01	76	2415	2186	3/21/15	3/11/17	Scaffold	SC	SAMEA1025866	GCA_001090525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/525/GCA_001090525.1_6899_4_4	-	SMRU2020
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.31391	65.4	-	CQRW01	217	4316	3981	3/23/15	3/11/17	Scaffold	SC	SAMEA1706672	GCA_001194055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/055/GCA_001194055.1_5227_5_5	-	J09500392
Escherichia coli	562	PRJNA261490	261490	Proteobacteria	Gammaproteobacteria	5.34869	50.6	-	JRKD01	207	5707	5300	3/5/15	2/23/17	Contig	unverisity medical center groningen	SAMN03075144	GCA_000947985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/985/GCA_000947985.1_ASM94798v1	25656624	381-1
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70273	52.2	-	MLWQ01	44	4776	4514	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962169	GCA_001834605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/605/GCA_001834605.1_ASM183460v1	-	CFSAN045047
Staphylococcus aureus VET0128R	1422453	PRJNA228544	228544	Terrabacteria group	Firmicutes	2.81962	32.8	-	JISV01	47	2925	2728	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404036	GCA_000641615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/615/GCA_000641615.1_Stap_aure_VET0128R_V1	-	VET0128R
Staphylococcus aureus VET0129R	1422454	PRJNA228545	228545	Terrabacteria group	Firmicutes	2.89398	32.9	-	JISU01	19	3013	2830	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404037	GCA_000641635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/635/GCA_000641635.1_Stap_aure_VET0129R_V1	-	VET0129R
Salmonella enterica subsp. enterica serovar Rubislaw	598	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.9813	52.1	-	MLWR01	61	5120	4820	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962170	GCA_001834625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/625/GCA_001834625.1_ASM183462v1	-	CFSAN045048
Escherichia coli	562	PRJNA261490	261490	Proteobacteria	Gammaproteobacteria	5.33524	50.6	-	JRLN01	187	5690	5291	3/5/15	2/23/17	Contig	unverisity medical center groningen	SAMN03075188	GCA_000947995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/995/GCA_000947995.1_ASM94799v1	25656624	8G
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.32273	65.3	-	CQTU01	296	4377	4045	3/23/15	3/10/17	Scaffold	SC	SAMEA968189	GCA_001194425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/425/GCA_001194425.1_5237_7_5	-	T09900518
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05383	39.5	-	CMAM01	88	2242	2022	3/21/15	3/11/17	Scaffold	SC	SAMEA1028628	GCA_001090625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/625/GCA_001090625.1_7004_5_5	-	SMRU2861
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.08106	39.6	-	CMHQ01	51	2302	2066	3/23/15	3/11/17	Scaffold	SC	SAMEA1029454	GCA_001090645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/645/GCA_001090645.1_7038_6_18	-	SMRU2994
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.31063	65.3	-	CQTP01	271	4338	4061	3/22/15	3/10/17	Scaffold	SC	SAMEA968162	GCA_001194925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/925/GCA_001194925.1_5237_6_7	-	R09401256
Escherichia coli	562	PRJNA261490	261490	Proteobacteria	Gammaproteobacteria	4.97196	50.5	-	JRLM01	120	5224	4856	3/5/15	2/23/17	Contig	unverisity medical center groningen	SAMN03075145	GCA_000948005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/005/GCA_000948005.1_ASM94800v1	25656624	381-3
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.83558	52.2	-	MLWU01	57	4940	4700	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962173	GCA_001834645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/645/GCA_001834645.1_ASM183464v1	-	CFSAN045051
Staphylococcus aureus VET0130R	1422455	PRJNA228546	228546	Terrabacteria group	Firmicutes	2.79824	32.8	-	JIST01	36	2914	2719	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404038	GCA_000641655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/655/GCA_000641655.1_Stap_aure_VET0130R_V1	-	VET0130R
Staphylococcus aureus VET0132R	1422456	PRJNA228547	228547	Terrabacteria group	Firmicutes	2.84154	32.8	-	JISS01	40	2982	2785	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404039	GCA_000641675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/675/GCA_000641675.1_Stap_aure_VET0132R_V1	-	VET0132R
Salmonella enterica subsp. enterica serovar Rubislaw	598	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.98481	52.1	-	MLWS01	53	5120	4826	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962171	GCA_001834655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/655/GCA_001834655.1_ASM183465v1	-	CFSAN045049
Escherichia coli	562	PRJNA261490	261490	Proteobacteria	Gammaproteobacteria	5.3357	50.6	-	JRKF01	201	5698	5292	3/5/15	2/23/17	Contig	unverisity medical center groningen	SAMN03075216	GCA_000948055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/055/GCA_000948055.1_ASM94805v1	25656624	9Z
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.30229	65.4	-	CRYA01	285	4360	4075	3/23/15	3/11/17	Scaffold	SC	SAMEA968144	GCA_001195185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/185/GCA_001195185.1_5319_2_7	-	N00701874
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99612	39.8	-	CQQF01	39	2224	1982	3/22/15	3/11/17	Scaffold	SC	SAMEA970224	GCA_001090765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/765/GCA_001090765.1_5159_5_2	-	BHN603
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08265	39.7	-	CKZM01	63	2293	2087	3/21/15	3/11/17	Scaffold	SC	SAMEA1025937	GCA_001090785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/785/GCA_001090785.1_6840_1_20	-	SMRU1772
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.31291	65.3	-	CQTX01	289	4375	4045	3/23/15	3/10/17	Scaffold	SC	SAMEA968200	GCA_001195325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/325/GCA_001195325.1_5237_7_4	-	T09900050
Escherichia coli	562	PRJNA273275	273275	Proteobacteria	Gammaproteobacteria	5.24273	50.6	-	JXVU01	181	5679	5234	3/6/15	2/23/17	Contig	Canadian Food Inspection Agency	SAMN03292335	GCA_000948435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/435/GCA_000948435.1_ASM94843v1	25860693	OLC-679
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.75368	52.1	-	MLWT01	45	4840	4602	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962172	GCA_001834665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/665/GCA_001834665.1_ASM183466v1	-	CFSAN045050
Staphylococcus aureus VET0133R	1422457	PRJNA228548	228548	Terrabacteria group	Firmicutes	2.84624	32.9	-	JISR01	60	2984	2773	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404040	GCA_000641695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/695/GCA_000641695.1_Stap_aure_VET0133R_V1	-	VET0133R
Staphylococcus aureus VET0134R	1422458	PRJNA228549	228549	Terrabacteria group	Firmicutes	2.7808	32.8	-	JISQ01	34	2900	2701	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404041	GCA_000641715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/715/GCA_000641715.1_Stap_aure_VET0134R_V1	-	VET0134R
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.75557	52.1	-	MLWV01	52	4843	4605	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962174	GCA_001834705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/705/GCA_001834705.1_ASM183470v1	-	CFSAN045052
Escherichia coli O157:H7 str. EDL933	155864	PRJNA273275	273275	Proteobacteria	Gammaproteobacteria	5.27681	50.3	-	JXVL01	157	5666	5233	3/6/15	2/23/17	Contig	Canadian Food Inspection Agency	SAMN03292324	GCA_000948445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/445/GCA_000948445.1_ASM94844v1	25860693	EDL933
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.25808	65.3	-	CQRN01	402	4394	3983	3/23/15	3/10/17	Scaffold	SC	SAMEA1706658	GCA_001195645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/645/GCA_001195645.1_5227_5_11	-	J09701920
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.12201	39.6	-	CKEI01	90	2351	2118	3/21/15	3/11/17	Scaffold	SC	SAMEA1023674	GCA_001090945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/945/GCA_001090945.1_6630_2_15	-	23F
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05292	39.7	-	CLMY01	53	2250	2038	3/21/15	3/11/17	Scaffold	SC	SAMEA1028795	GCA_001090985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/985/GCA_001090985.1_6938_7_3	-	SMRU2691
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.29978	65.4	-	CQSR01	232	4318	4066	3/23/15	3/10/17	Scaffold	SC	SAMEA1706667	GCA_001195665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/665/GCA_001195665.1_5227_8_6	-	P00401720
Escherichia coli	562	PRJNA273275	273275	Proteobacteria	Gammaproteobacteria	5.27194	50.5	-	JXVW01	357	5713	5107	3/6/15	2/23/17	Contig	Canadian Food Inspection Agency	SAMN03292337	GCA_000948465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/465/GCA_000948465.1_ASM94846v1	25860693	OLC-684
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.20361	52	-	MLWY01	50	5428	5149	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962177	GCA_001834725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/725/GCA_001834725.1_ASM183472v1	-	CFSAN045055
Staphylococcus aureus VET0140R	1422460	PRJNA228551	228551	Terrabacteria group	Firmicutes	2.78304	32.9	-	JISO01	34	2895	2706	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404043	GCA_000641735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/735/GCA_000641735.1_Stap_aure_VET0140R_V1	-	VET0140R
Staphylococcus aureus VET0148R	1422462	PRJNA228553	228553	Terrabacteria group	Firmicutes	2.77546	32.8	-	JISM01	24	2878	2696	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404045	GCA_000641755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/755/GCA_000641755.1_Stap_aure_VET0148R_V1	-	VET0148R
Salmonella enterica subsp. enterica serovar Inverness	913074	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.00519	52.1	-	MLSS01	46	5177	4862	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961978	GCA_001834735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/735/GCA_001834735.1_ASM183473v1	-	CFSAN044911
Escherichia coli	562	PRJNA273275	273275	Proteobacteria	Gammaproteobacteria	5.17685	50.5	-	JXVV01	176	5604	5153	3/6/15	2/23/17	Contig	Canadian Food Inspection Agency	SAMN03292336	GCA_000948475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/475/GCA_000948475.1_ASM94847v1	25860693	OLC-682
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.30207	65.3	-	CRZF01	183	4350	4078	3/23/15	3/11/17	Scaffold	SC	SAMEA968155	GCA_001195685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/685/GCA_001195685.1_5505_8_10	-	SH5-875
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.15066	39.6	-	CMCK01	65	2391	2162	3/21/15	3/11/17	Scaffold	SC	SAMEA1029222	GCA_001091025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/025/GCA_001091025.1_7004_8_87	-	SMRU2919
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.04752	39.5	-	CKYU01	78	2261	2040	3/21/15	3/4/17	Scaffold	SC	SAMEA1025261	GCA_001091185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/185/GCA_001091185.1_6830_3_4	-	SMRU1636
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.29786	65.4	-	CQSU01	268	4329	4078	3/23/15	3/10/17	Scaffold	SC	SAMEA1706675	GCA_001195725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/725/GCA_001195725.1_5227_8_5	-	P09701236
Escherichia coli	562	PRJNA273275	273275	Proteobacteria	Gammaproteobacteria	5.14581	50.4	-	JXVX01	187	5516	5055	3/6/15	2/23/17	Contig	Canadian Food Inspection Agency	SAMN03292338	GCA_000948515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/515/GCA_000948515.1_ASM94851v1	25860693	OLC-710
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.00474	52.1	-	MLST01	37	5161	4854	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961979	GCA_001834755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/755/GCA_001834755.1_ASM183475v1	-	CFSAN044912
Staphylococcus aureus VET0151R	1422464	PRJNA228555	228555	Terrabacteria group	Firmicutes	2.76293	32.9	-	JISK01	33	2862	2678	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404047	GCA_000641775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/775/GCA_000641775.1_Stap_aure_VET0151R_V1	-	VET0151R
Staphylococcus aureus VET0152R	1422465	PRJNA228556	228556	Terrabacteria group	Firmicutes	2.81299	32.9	-	JISJ01	56	2944	2739	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404048	GCA_000641795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/795/GCA_000641795.1_Stap_aure_VET0152R_V1	-	VET0152R
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.0047	52.1	-	MLSU01	44	5171	4862	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961980	GCA_001834785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/785/GCA_001834785.1_ASM183478v1	-	CFSAN044913
Escherichia coli	562	PRJNA273275	273275	Proteobacteria	Gammaproteobacteria	4.93176	50.5	-	JXVY01	204	5336	4819	3/6/15	2/23/17	Contig	Canadian Food Inspection Agency	SAMN03292339	GCA_000948535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/535/GCA_000948535.1_ASM94853v1	25860693	OLC-715
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.25676	65.2	-	CQSA01	522	4486	3998	3/23/15	3/10/17	Scaffold	SC	SAMEA1706706	GCA_001195765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/765/GCA_001195765.1_5227_6_2	-	J09800745
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.07638	39.8	-	CMID01	61	2296	2082	3/23/15	3/4/17	Scaffold	SC	SAMEA1029184	GCA_001091285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/285/GCA_001091285.1_7038_6_21	-	SMRU2997
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.04885	39.7	-	CKRG01	63	2245	2023	3/21/15	3/4/17	Scaffold	SC	SAMEA1024799	GCA_001091345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/345/GCA_001091345.1_6680_7_20	-	SMRU980
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.28999	65.3	-	CQUD01	251	4319	4004	3/23/15	3/10/17	Scaffold	SC	SAMEA968108	GCA_001195845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/845/GCA_001195845.1_5237_8_3	-	Y09400034
Escherichia coli	562	PRJNA273275	273275	Proteobacteria	Gammaproteobacteria	5.35912	50.5	-	JXVZ01	221	5903	5406	3/6/15	2/23/17	Contig	Canadian Food Inspection Agency	SAMN03292340	GCA_000948555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/555/GCA_000948555.1_ASM94855v1	25860693	OLC-716
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.1356	52	-	MLSW01	46	5302	5030	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961986	GCA_001834805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/805/GCA_001834805.1_ASM183480v1	-	CFSAN044919
Staphylococcus aureus VET0155R	1422467	PRJNA228558	228558	Terrabacteria group	Firmicutes	2.82032	32.9	-	JISH01	55	2950	2749	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404050	GCA_000641815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/815/GCA_000641815.1_Stap_aure_VET0155R_V1	-	VET0155R
Staphylococcus aureus VET0156R	1422468	PRJNA228559	228559	Terrabacteria group	Firmicutes	2.83706	32.8	-	JISG01	43	2970	2780	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404051	GCA_000641835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/835/GCA_000641835.1_Stap_aure_VET0156R_V1	-	VET0156R
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.79407	52.1	-	MLSY01	41	4907	4659	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961989	GCA_001834815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/815/GCA_001834815.1_ASM183481v1	-	CFSAN044922
Escherichia coli	562	PRJNA273275	273275	Proteobacteria	Gammaproteobacteria	5.17323	50.7	-	JXWA01	126	5462	5074	3/6/15	2/23/17	Contig	Canadian Food Inspection Agency	SAMN03292341	GCA_000948565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/565/GCA_000948565.1_ASM94856v1	-	OLC-721
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.24906	65.4	-	CQSN01	258	4296	4033	3/23/15	3/11/17	Scaffold	SC	SAMEA1706690	GCA_001195905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/905/GCA_001195905.1_5227_7_7	-	O09501127
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11982	39.5	-	CKPW01	43	2351	2117	3/21/15	3/4/17	Scaffold	SC	SAMEA1024647	GCA_001091365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/365/GCA_001091365.1_6680_5_23	-	SMRU935
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.18605	39.5	-	CLTX01	49	2429	2193	3/21/15	3/4/17	Scaffold	SC	SAMEA1026147	GCA_001091465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/465/GCA_001091465.1_6983_2_1	-	SMRU2209
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.28468	65.2	-	CQSB01	370	4408	4001	3/23/15	3/10/17	Scaffold	SC	SAMEA1706697	GCA_001195965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/965/GCA_001195965.1_5227_6_5	-	J09900583
Escherichia coli	562	PRJNA273275	273275	Proteobacteria	Gammaproteobacteria	5.37578	50.4	-	JXWB01	230	5944	5424	3/6/15	2/23/17	Contig	Canadian Food Inspection Agency	SAMN03292342	GCA_000948595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/595/GCA_000948595.1_ASM94859v1	-	OLC-728
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.34861	51.2	-	MLTE01	66	5421	4997	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961996	GCA_001834825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/825/GCA_001834825.1_ASM183482v1	-	CFSAN044929
Staphylococcus aureus VET0161R	1422472	PRJNA228563	228563	Terrabacteria group	Firmicutes	2.83453	32.9	-	JISC01	30	2961	2773	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404055	GCA_000641855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/855/GCA_000641855.1_Stap_aure_VET0161R_V1	-	VET0161R
Staphylococcus aureus VET0162R	1422473	PRJNA228564	228564	Terrabacteria group	Firmicutes	2.7826	32.9	-	JISB01	32	2895	2703	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404056	GCA_000641875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/875/GCA_000641875.1_Stap_aure_VET0162R_V1	-	VET0162R
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70233	52.2	-	MLTF01	43	4774	4511	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04961997	GCA_001834845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/845/GCA_001834845.1_ASM183484v1	-	CFSAN044930
Escherichia coli	562	PRJNA273275	273275	Proteobacteria	Gammaproteobacteria	5.40541	50.5	-	JXVM01	171	5821	5374	3/6/15	2/23/17	Contig	Canadian Food Inspection Agency	SAMN03292325	GCA_000948605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/605/GCA_000948605.1_ASM94860v1	25860693	OLC-1051
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.32119	65.3	-	CQUA01	315	4372	4032	3/23/15	3/10/17	Scaffold	SC	SAMEA968208	GCA_001196185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/185/GCA_001196185.1_5237_7_9	-	T09800928
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.04407	39.7	-	CPKK01	66	2232	2027	3/22/15	3/4/17	Scaffold	SC	SAMEA682581	GCA_001091505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/505/GCA_001091505.1_5429_8_7	-	09B09450
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09852	39.7	-	CLFI01	109	2336	2104	3/21/15	3/4/17	Scaffold	SC	SAMEA1026085	GCA_001091565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/565/GCA_001091565.1_6899_7_4	-	SMRU2092
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.28969	65.3	-	CQSX01	321	4367	4053	3/23/15	3/10/17	Scaffold	SC	SAMEA968123	GCA_001196225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/225/GCA_001196225.1_5237_5_1	-	W09900422
Escherichia coli	562	PRJNA273275	273275	Proteobacteria	Gammaproteobacteria	5.33096	50.3	-	JXVN01	177	5758	5321	3/6/15	2/23/17	Contig	Canadian Food Inspection Agency	SAMN03292326	GCA_000948615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/615/GCA_000948615.1_ASM94861v1	25860693	OLC-1470
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.11808	51.4	-	MLTL01	64	5123	4758	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962003	GCA_001834885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/885/GCA_001834885.1_ASM183488v1	-	CFSAN044936
Staphylococcus aureus VET0164R	1422474	PRJNA228565	228565	Terrabacteria group	Firmicutes	2.76945	32.8	-	JISA01	43	2884	2679	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404057	GCA_000641895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/895/GCA_000641895.1_Stap_aure_VET0164R_V1	-	VET0164R
Staphylococcus aureus VET0165R	1422475	PRJNA228566	228566	Terrabacteria group	Firmicutes	2.80032	32.8	-	JIRZ01	59	2913	2734	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404058	GCA_000641915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/915/GCA_000641915.1_Stap_aure_VET0165R_V1	-	VET0165R
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.94589	52.1	-	MLTM01	77	5070	4762	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962004	GCA_001834895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/895/GCA_001834895.1_ASM183489v1	-	CFSAN044937
Escherichia coli	562	PRJNA273275	273275	Proteobacteria	Gammaproteobacteria	4.89053	50.7	-	JXVO01	84	5095	4795	3/6/15	2/23/17	Contig	Canadian Food Inspection Agency	SAMN03292327	GCA_000948625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/625/GCA_000948625.1_ASM94862v1	25860693	OLC-1547
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.29472	65.3	-	CSAG01	326	4377	3889	3/23/15	3/11/17	Scaffold	SC	SAMEA968154	GCA_001196315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/315/GCA_001196315.1_6505_2_2	-	I09400880
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.04353	39.7	-	CPQG01	74	2246	2022	3/23/15	3/4/17	Scaffold	SC	SAMEA1020323	GCA_001091585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/585/GCA_001091585.1_6187_4_15	-	S-119
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.15873	39.3	-	CLYT01	50	2360	2110	3/21/15	3/4/17	Scaffold	SC	SAMEA1028886	GCA_001091625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/625/GCA_001091625.1_6983_7_68	-	SMRU2372
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.25256	65.4	-	CQSL01	228	4301	4006	3/22/15	3/10/17	Scaffold	SC	SAMEA1706676	GCA_001196335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/335/GCA_001196335.1_5227_7_2	-	O09701563
Escherichia coli	562	PRJNA273275	273275	Proteobacteria	Gammaproteobacteria	5.07183	50.9	-	JXVP01	224	5484	4931	3/6/15	2/23/17	Contig	Canadian Food Inspection Agency	SAMN03292328	GCA_000948675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/675/GCA_000948675.1_ASM94867v1	25860693	OLC-1555
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70159	52.2	-	MLTN01	45	4772	4514	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962005	GCA_001834905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/905/GCA_001834905.1_ASM183490v1	-	CFSAN044938
Staphylococcus aureus VET0166R	1422476	PRJNA228567	228567	Terrabacteria group	Firmicutes	2.80275	32.9	-	JIRY01	61	2918	2705	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404059	GCA_000641935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/935/GCA_000641935.1_Stap_aure_VET0166R_V1	-	VET0166R
Staphylococcus aureus VET0167R	1422477	PRJNA228568	228568	Terrabacteria group	Firmicutes	2.76041	32.8	-	JIRX01	47	2870	2678	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404060	GCA_000641955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/955/GCA_000641955.1_Stap_aure_VET0167R_V1	-	VET0167R
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70465	52.2	-	MLTR01	44	4774	4514	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962015	GCA_001834915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/915/GCA_001834915.1_ASM183491v1	-	CFSAN044942
Escherichia coli	562	PRJNA273275	273275	Proteobacteria	Gammaproteobacteria	5.7088	50.3	-	JXVQ01	402	6498	5833	3/6/15	2/23/17	Contig	Canadian Food Inspection Agency	SAMN03292331	GCA_000948715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/715/GCA_000948715.1_ASM94871v1	25860693	OLC-455
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.2851	65.4	-	CRZT01	209	4331	4036	3/23/15	3/11/17	Scaffold	SC	SAMEA968127	GCA_001196635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/635/GCA_001196635.1_5505_8_3	-	N00800620
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08091	39.5	-	CLHT01	57	2278	2049	3/21/15	3/4/17	Scaffold	SC	SAMEA1026229	GCA_001091705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/705/GCA_001091705.1_6925_6_10	-	SMRU2194
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15372	39.6	-	CKFX01	119	2308	2038	3/21/15	3/11/17	Scaffold	SC	SAMEA1024068	GCA_001091745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/745/GCA_001091745.1_6630_4_19	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.3171	65.4	-	CRZX01	180	4335	4065	3/23/15	3/11/17	Scaffold	SC	SAMEA968156	GCA_001196835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/835/GCA_001196835.1_5505_8_9	-	SH1-874
Escherichia coli	562	PRJNA273275	273275	Proteobacteria	Gammaproteobacteria	5.4905	50.3	-	JXVR01	273	6106	5574	3/6/15	2/23/17	Contig	Canadian Food Inspection Agency	SAMN03292332	GCA_000948745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/745/GCA_000948745.1_ASM94874v1	25860693	OLC-464
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93888	52.1	-	MLTU01	77	5059	4756	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962018	GCA_001834965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/965/GCA_001834965.1_ASM183496v1	-	CFSAN044945
Staphylococcus aureus VET0171R	1422478	PRJNA228569	228569	Terrabacteria group	Firmicutes	2.82071	32.8	-	JIRW01	37	2930	2737	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404061	GCA_000641975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/975/GCA_000641975.1_Stap_aure_VET0171R_V1	-	VET0171R
Staphylococcus aureus VET0176R	1422479	PRJNA228570	228570	Terrabacteria group	Firmicutes	2.77359	32.9	-	JIRV01	37	2876	2695	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404062	GCA_000641995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/641/995/GCA_000641995.1_Stap_aure_VET0176R_V1	-	VET0176R
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93417	52.1	-	MLTS01	28	5066	4774	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962016	GCA_001834975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/834/975/GCA_001834975.1_ASM183497v1	-	CFSAN044943
Escherichia coli	562	PRJNA273275	273275	Proteobacteria	Gammaproteobacteria	5.38221	50.3	-	JXVS01	184	5859	5390	3/6/15	2/23/17	Contig	Canadian Food Inspection Agency	SAMN03292333	GCA_000948765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/765/GCA_000948765.1_ASM94876v1	25860693	OLC-469
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.29064	65.3	-	CRZH01	229	4341	4047	3/23/15	3/11/17	Scaffold	SC	SAMEA968130	GCA_001197035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/035/GCA_001197035.1_5505_8_2	-	N00000064
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21416	39.6	-	CPTX01	109	2462	2202	3/23/15	3/11/17	Scaffold	SC	SAMEA1408320	GCA_001091765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/765/GCA_001091765.1_7444_8_13	-	9701+10122
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.12224	39.6	-	CKAI01	66	2345	2114	3/21/15	3/11/17	Scaffold	SC	SAMEA974610	GCA_001091825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/825/GCA_001091825.1_6259_6_17	-	22F
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.27271	65.3	-	CQRK01	449	4437	4008	3/23/15	3/10/17	Scaffold	SC	SAMEA1706662	GCA_001197095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/095/GCA_001197095.1_5227_5_7	-	J09700140
Escherichia coli	562	PRJNA273275	273275	Proteobacteria	Gammaproteobacteria	5.35289	50.4	-	JXVT01	241	5769	5222	3/6/15	2/23/17	Contig	Canadian Food Inspection Agency	SAMN03292334	GCA_000948785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/785/GCA_000948785.1_ASM94878v1	25860693	OLC-675
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70136	52.2	-	MLUA01	42	4768	4519	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962026	GCA_001835005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/005/GCA_001835005.1_ASM183500v1	-	CFSAN044953
Staphylococcus aureus VET0177R	1422480	PRJNA228571	228571	Terrabacteria group	Firmicutes	2.76975	32.8	-	JIRU01	31	2889	2702	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404063	GCA_000642015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/015/GCA_000642015.1_Stap_aure_VET0177R_V1	-	VET0177R
Staphylococcus aureus VET0178R	1422481	PRJNA228572	228572	Terrabacteria group	Firmicutes	2.7933	32.8	-	JIRT01	40	2899	2734	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404064	GCA_000642035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/035/GCA_000642035.1_Stap_aure_VET0178R_V1	-	VET0178R
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.05929	52	-	MLTV01	48	5227	4914	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962021	GCA_001835015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/015/GCA_001835015.1_ASM183501v1	-	CFSAN044948
Escherichia coli	562	PRJNA273275	273275	Proteobacteria	Gammaproteobacteria	5.4677	50.3	-	JXWC01	256	6054	5524	3/6/15	2/23/17	Contig	Canadian Food Inspection Agency	SAMN03292343	GCA_000948815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/815/GCA_000948815.1_ASM94881v1	-	OLC-731
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.28221	65.3	-	CQSO01	291	4352	4053	3/23/15	3/10/17	Scaffold	SC	SAMEA1706689	GCA_001197435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/435/GCA_001197435.1_5227_7_8	-	P09501329
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10919	39.5	-	CLYZ01	64	2323	2120	3/21/15	3/11/17	Scaffold	SC	SAMEA1028960	GCA_001091865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/865/GCA_001091865.1_6983_8_74	-	SMRU2378
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.13775	39.7	-	CPQY01	113	2387	2165	3/22/15	3/11/17	Scaffold	SC	SAMEA682464	GCA_001092005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/005/GCA_001092005.1_5366_5_8	-	08B05980
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.32458	65.4	-	CRZA01	234	4328	4079	3/22/15	3/10/17	Scaffold	SC	SAMEA968099	GCA_001197555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/555/GCA_001197555.1_5477_7_7	-	R09401899
Escherichia coli	562	PRJNA273275	273275	Proteobacteria	Gammaproteobacteria	5.0924	50.4	-	JXWD01	229	5615	4985	3/6/15	2/23/17	Contig	Canadian Food Inspection Agency	SAMN03292344	GCA_000948825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/825/GCA_000948825.1_ASM94882v1	-	OLC-732
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.9345	52.1	-	MLUB01	29	5069	4775	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962027	GCA_001835045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/045/GCA_001835045.1_ASM183504v1	-	CFSAN044954
Staphylococcus aureus VET0179R	1422482	PRJNA228573	228573	Terrabacteria group	Firmicutes	2.80008	32.8	-	JIRS01	46	2938	2738	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404065	GCA_000642055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/055/GCA_000642055.1_Stap_aure_VET0179R_V1	-	VET0179R
Staphylococcus aureus VET0180R	1422483	PRJNA228574	228574	Terrabacteria group	Firmicutes	2.79795	32.8	-	JIRR01	33	2914	2723	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404066	GCA_000642075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/075/GCA_000642075.1_Stap_aure_VET0180R_V1	-	VET0180R
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93426	52.1	-	MLUD01	29	5069	4770	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962029	GCA_001835055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/055/GCA_001835055.1_ASM183505v1	-	CFSAN044956
Escherichia coli	562	PRJNA273275	273275	Proteobacteria	Gammaproteobacteria	5.10575	50.5	-	JXWE01	81	5334	4987	3/6/15	2/23/17	Contig	Canadian Food Inspection Agency	SAMN03292345	GCA_000948835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/835/GCA_000948835.1_ASM94883v1	-	OLC-733
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.30018	65.4	-	CQTH01	293	4355	4074	3/23/15	3/10/17	Scaffold	SC	SAMEA968164	GCA_001197655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/655/GCA_001197655.1_5237_6_1	-	Q09901139
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05933	39.5	-	CLNC01	54	2272	2046	3/21/15	3/11/17	Scaffold	SC	SAMEA1028732	GCA_001092025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/025/GCA_001092025.1_6938_8_18	-	SMRU2730
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09223	39.7	-	CLBQ01	58	2324	2102	3/21/15	3/11/17	Scaffold	SC	SAMEA1026032	GCA_001092045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/045/GCA_001092045.1_6871_1_3	-	SMRU1779
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.28803	65.3	-	CRZJ01	205	4330	4037	3/22/15	3/11/17	Scaffold	SC	SAMEA968132	GCA_001197895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/895/GCA_001197895.1_5477_8_11	-	N09900612
Escherichia coli	562	PRJNA273275	273275	Proteobacteria	Gammaproteobacteria	5.32841	50.5	-	JXWF01	185	5765	5281	3/6/15	2/23/17	Contig	Canadian Food Inspection Agency	SAMN03292346	GCA_000948875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/875/GCA_000948875.1_ASM94887v1	-	OLC-791
Salmonella enterica subsp. enterica serovar Mbandaka	192954	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.33573	51.2	-	MLUE01	68	5402	4979	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962031	GCA_001835085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/085/GCA_001835085.1_ASM183508v1	-	CFSAN044958
Staphylococcus aureus VET0188R	1422488	PRJNA228579	228579	Terrabacteria group	Firmicutes	2.81155	32.9	-	JIRO01	39	2935	2741	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404071	GCA_000642095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/095/GCA_000642095.1_Stap_aure_VET0188R_V1	-	VET0188R
Staphylococcus aureus VET0189R	1422489	PRJNA228580	228580	Terrabacteria group	Firmicutes	2.80279	32.9	-	JIRN01	40	2928	2738	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404072	GCA_000642115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/115/GCA_000642115.1_Stap_aure_VET0189R_V1	-	VET0189R
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.19884	52.1	-	MLUH01	70	5400	5108	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962035	GCA_001835095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/095/GCA_001835095.1_ASM183509v1	-	CFSAN044962
Escherichia coli	562	PRJNA273275	273275	Proteobacteria	Gammaproteobacteria	4.96863	50.6	-	JXWH01	80	5165	4839	3/6/15	2/23/17	Contig	Canadian Food Inspection Agency	SAMN03292348	GCA_000948885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/885/GCA_000948885.1_ASM94888v1	-	OLC-816
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.31633	65.4	-	CQST01	239	4327	4077	3/23/15	3/10/17	Scaffold	SC	SAMEA1706691	GCA_001198275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/275/GCA_001198275.1_5227_8_9	-	Q09900060
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.18501	39.6	-	CKCZ01	71	2437	2180	3/21/15	3/11/17	Scaffold	SC	SAMEA1023706	GCA_001092065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/065/GCA_001092065.1_6593_5_15	-	14
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09433	39.5	-	CMJL01	61	2288	2061	3/23/15	3/11/17	Scaffold	SC	SAMEA1025753	GCA_001092125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/125/GCA_001092125.1_7038_8_32	-	SMRU2240
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.26811	65.2	-	CRZY01	469	4444	3827	3/22/15	3/10/17	Scaffold	SC	SAMEA968094	GCA_001198575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/575/GCA_001198575.1_6505_1_3	-	F09900854
Escherichia coli	562	PRJNA273275	273275	Proteobacteria	Gammaproteobacteria	5.28818	50.3	-	JXWG01	169	5705	5270	3/6/15	2/23/17	Contig	Canadian Food Inspection Agency	SAMN03292347	GCA_000948895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/895/GCA_000948895.1_ASM94889v1	-	OLC-797
Salmonella enterica subsp. enterica serovar Bareilly	58096	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.78317	52	-	MLUI01	49	4930	4639	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962036	GCA_001835125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/125/GCA_001835125.1_ASM183512v1	-	CFSAN044963
Staphylococcus aureus VET0190R	1422490	PRJNA228581	228581	Terrabacteria group	Firmicutes	2.8443	32.9	-	JIRM01	55	2986	2793	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404073	GCA_000642135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/135/GCA_000642135.1_Stap_aure_VET0190R_V1	-	VET0190R
Staphylococcus aureus VET0192R	1422492	PRJNA228583	228583	Terrabacteria group	Firmicutes	2.84187	32.9	-	JIRK01	57	2967	2771	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404075	GCA_000642155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/155/GCA_000642155.1_Stap_aure_VET0192R_V1	-	VET0192R
Salmonella enterica subsp. enterica serovar Rubislaw	598	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.04357	52.1	-	MLUX01	102	5185	4859	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962054	GCA_001835135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/135/GCA_001835135.1_ASM183513v1	-	CFSAN044981
Escherichia coli	562	PRJNA273275	273275	Proteobacteria	Gammaproteobacteria	5.17216	50.3	-	JXWI01	67	5353	4969	3/6/15	2/23/17	Contig	Canadian Food Inspection Agency	SAMN03292349	GCA_000948905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/905/GCA_000948905.1_ASM94890v1	-	OLC-975
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.28316	65.3	-	CQTA01	406	4413	4026	3/22/15	3/10/17	Scaffold	SC	SAMEA968124	GCA_001198855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/855/GCA_001198855.1_5237_5_3	-	W09900434
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09851	39.6	-	CMCC01	71	2341	2109	3/21/15	3/11/17	Scaffold	SC	SAMEA1029344	GCA_001092185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/185/GCA_001092185.1_7004_7_64	-	SMRU2896
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99321	39.7	-	CQQY01	53	2204	2009	3/23/15	3/11/17	Scaffold	SC	SAMEA970263	GCA_001092285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/285/GCA_001092285.1_5159_7_4	-	BHN630
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.30521	65.4	-	CRYU01	258	4336	4075	3/22/15	3/10/17	Scaffold	SC	SAMEA968146	GCA_001199275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/275/GCA_001199275.1_5319_2_5	-	N00401131
Escherichia coli	562	PRJNA273275	273275	Proteobacteria	Gammaproteobacteria	5.33531	50.3	-	JXWJ01	165	5755	5327	3/6/15	2/23/17	Contig	Canadian Food Inspection Agency	SAMN03292350	GCA_000948955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/948/955/GCA_000948955.1_ASM94895v1	-	Sakai
Salmonella enterica subsp. enterica serovar Rubislaw	598	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.04211	52.1	-	MLUZ01	105	5182	4860	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962087	GCA_001835155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/155/GCA_001835155.1_ASM183515v1	-	CFSAN044985
Staphylococcus aureus VET0193R	1422493	PRJNA228584	228584	Terrabacteria group	Firmicutes	2.75862	32.8	-	JIRJ01	35	2844	2680	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404076	GCA_000642175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/175/GCA_000642175.1_Stap_aure_VET0193R_V1	-	VET0193R
Staphylococcus aureus VET0194R	1422494	PRJNA228585	228585	Terrabacteria group	Firmicutes	2.78784	32.8	-	JIRI01	52	2898	2714	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404077	GCA_000642195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/195/GCA_000642195.1_Stap_aure_VET0194R_V1	-	VET0194R
Salmonella enterica subsp. enterica serovar Inverness	913074	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.0205	52.1	-	MLVB01	45	5187	4875	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962090	GCA_001835175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/175/GCA_001835175.1_ASM183517v1	-	CFSAN044988
Escherichia coli	562	PRJNA274601	274601	Proteobacteria	Gammaproteobacteria	5.68157	50.5	-	JYEF01	560	5905	5393	3/12/15	2/23/17	Contig	Copenhagen University	SAMN03333329	GCA_000951735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/951/735/GCA_000951735.1_ASM95173v1	25953185	D2-2
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.27075	65.3	-	CQUH01	465	4465	4011	3/23/15	3/10/17	Scaffold	SC	SAMEA968175	GCA_001200015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/015/GCA_001200015.1_5237_8_8	-	M09402043
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11936	39.5	-	CKVL01	38	2351	2104	3/21/15	3/11/17	Scaffold	SC	SAMEA1025933	GCA_001092325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/325/GCA_001092325.1_6823_4_14	-	SMRU1934
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10817	39.7	-	CLDB01	78	2287	2042	3/21/15	3/11/17	Scaffold	SC	SAMEA1025849	GCA_001092425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/425/GCA_001092425.1_6899_4_20	-	SMRU2036
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.30326	65.3	-	CSAK01	273	4335	3889	3/22/15	3/10/17	Scaffold	SC	SAMEA968148	GCA_001200255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/255/GCA_001200255.1_6505_2_7	-	K09900646
Escherichia coli	562	PRJNA274601	274601	Proteobacteria	Gammaproteobacteria	5.02846	50.4	-	JYEE01	135	5204	4900	3/12/15	2/23/17	Contig	Copenhagen University	SAMN03333327	GCA_000951745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/951/745/GCA_000951745.1_ASM95174v1	25953185	Chronic_salp
Salmonella enterica subsp. enterica serovar Inverness	913074	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.01974	52.1	-	MLVJ01	44	5180	4866	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962098	GCA_001835205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/205/GCA_001835205.1_ASM183520v1	-	CFSAN044996
Staphylococcus aureus VET0195R	1422495	PRJNA228586	228586	Terrabacteria group	Firmicutes	2.77776	32.8	-	JIRH01	39	2884	2696	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404078	GCA_000642215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/215/GCA_000642215.1_Stap_aure_VET0195R_V1	-	VET0195R
Staphylococcus aureus VET0198R	1422498	PRJNA228589	228589	Terrabacteria group	Firmicutes	2.79849	32.8	-	JIRF01	45	2934	2736	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404081	GCA_000642235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/235/GCA_000642235.1_Stap_aure_VET0198R_V1	-	VET0198R
Salmonella enterica subsp. enterica serovar Inverness	913074	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.20266	52	-	MLVK01	50	5423	5147	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962099	GCA_001835225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/225/GCA_001835225.1_ASM183522v1	-	CFSAN044997
Escherichia coli	562	PRJNA274601	274601	Proteobacteria	Gammaproteobacteria	5.09528	50.5	-	JYED01	227	5396	5028	3/12/15	2/23/17	Contig	Copenhagen University	SAMN03329622	GCA_000951755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/951/755/GCA_000951755.1_ASM95175v1	25953185	Cp6salp3
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.35134	65.4	-	CQTS01	217	4329	3996	3/23/15	3/10/17	Scaffold	SC	SAMEA968192	GCA_001200495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/495/GCA_001200495.1_5237_7_1	-	R00018412
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11906	39.5	-	CKTL01	54	2362	2109	3/21/15	3/11/17	Scaffold	SC	SAMEA1025693	GCA_001092445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/445/GCA_001092445.1_6823_1_13	-	SMRU1861
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.17074	39.6	-	CKZX01	70	2413	2191	3/21/15	3/11/17	Scaffold	SC	SAMEA1025837	GCA_001092565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/565/GCA_001092565.1_6840_3_18	-	SMRU1818
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.27264	65.3	-	CQTM01	434	4455	4035	3/22/15	3/10/17	Scaffold	SC	SAMEA968169	GCA_001200555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/555/GCA_001200555.1_5237_6_4	-	F00002017
Escherichia coli	562	PRJNA277626	277626	Proteobacteria	Gammaproteobacteria	5.3966	50.3	-	JZSD01	655	5889	5399	3/16/15	2/23/17	Contig	University of Glasgow	SAMN03394618	GCA_000953765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/765/GCA_000953765.1_ASM95376v1	-	MCI_507
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.6634	52.3	-	MLVS01	27	4705	4494	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962110	GCA_001835235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/235/GCA_001835235.1_ASM183523v1	-	CFSAN045008
Staphylococcus aureus VET0200R	1422500	PRJNA228591	228591	Terrabacteria group	Firmicutes	2.78045	32.9	-	JIRE01	42	2892	2715	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404083	GCA_000642255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/255/GCA_000642255.1_Stap_aure_VET0200R_V1	-	VET0200R
Staphylococcus aureus VET0212R	1422508	PRJNA228599	228599	Terrabacteria group	Firmicutes	2.82962	32.9	-	JIRC01	40	2944	2761	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404091	GCA_000642275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/275/GCA_000642275.1_Stap_aure_VET0212R_V1	-	VET0212R
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.76209	52.1	-	MLVV01	48	4860	4619	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962113	GCA_001835255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/255/GCA_001835255.1_ASM183525v1	-	CFSAN045011
Escherichia coli	562	PRJNA275300	275300	Proteobacteria	Gammaproteobacteria	4.83361	50.7	-	JYHQ01	130	5065	4721	3/16/15	2/23/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02949649	GCA_000954035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/954/035/GCA_000954035.1_ASM95403v1	-	MPEC4969
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.29697	65.3	-	CSAT01	317	4375	3898	3/22/15	3/11/17	Scaffold	SC	SAMEA968135	GCA_001201055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/055/GCA_001201055.1_6505_4_9	-	M09400937
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11578	39.4	-	CIMD01	73	2386	2138	3/21/15	3/11/17	Scaffold	SC	SAMEA1023897	GCA_001092665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/665/GCA_001092665.1_6631_3_21	-	10F
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.08992	39.7	-	CKFJ01	92	2326	2080	3/21/15	3/4/17	Scaffold	SC	SAMEA1024095	GCA_001092685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/685/GCA_001092685.1_6630_3_3	-	19F
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.26706	65.3	-	CQRX01	760	4536	3965	3/22/15	3/10/17	Scaffold	SC	SAMEA1706677	GCA_001201335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/335/GCA_001201335.1_5227_5_6	-	J09602061
Escherichia coli	562	PRJNA275051	275051	Proteobacteria	Gammaproteobacteria	4.86688	50.4	-	JYHP01	124	5092	4716	3/16/15	2/23/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02949648	GCA_000954045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/954/045/GCA_000954045.1_ASM95404v1	-	MPEC4839
Salmonella enterica subsp. enterica serovar Bareilly	58096	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.79671	52	-	MLVW01	51	4943	4653	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962118	GCA_001835285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/285/GCA_001835285.1_ASM183528v1	-	CFSAN045016
Staphylococcus aureus VET0213R	1422509	PRJNA228600	228600	Terrabacteria group	Firmicutes	2.83747	32.8	-	JIRB01	35	2966	2780	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404092	GCA_000642295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/295/GCA_000642295.1_Stap_aure_VET0213R_V1	-	VET0213R
Staphylococcus aureus VET0214R	1422510	PRJNA228601	228601	Terrabacteria group	Firmicutes	2.85168	32.9	-	JIRA01	47	2981	2787	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404093	GCA_000642315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/315/GCA_000642315.1_Stap_aure_VET0214R_V1	-	VET0214R
Salmonella enterica subsp. enterica serovar Rubislaw	598	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.94659	52.1	-	MLVX01	77	5073	4762	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962119	GCA_001835305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/305/GCA_001835305.1_ASM183530v1	-	CFSAN045017
Escherichia coli	562	PRJNA280863	280863	Proteobacteria	Gammaproteobacteria	4.98999	50.8	-	LAXC01	139	5260	4908	4/24/15	2/23/17	Contig	Centers for Disease Control and Prevention	SAMN03473297	GCA_000981065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/065/GCA_000981065.1_ASM98106v1	-	ST-44
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.26741	65	-	CSAF01	518	4431	3786	3/23/15	3/10/17	Scaffold	SC	SAMEA968195	GCA_001201495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/495/GCA_001201495.1_6505_2_11	-	K09700503
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.04776	39.6	-	CMIW01	29	2278	2041	3/22/15	3/4/17	Scaffold	SC	SAMEA1029435	GCA_001092805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/805/GCA_001092805.1_7038_7_3	-	SMRU3003
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.04642	39.7	-	CLQS01	51	2268	2054	3/21/15	3/4/17	Scaffold	SC	SAMEA1028999	GCA_001092845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/845/GCA_001092845.1_6949_4_5	-	SMRU2477
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.30773	65.4	-	CQUC01	230	4303	4016	3/22/15	3/10/17	Scaffold	SC	SAMEA968085	GCA_001201655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/655/GCA_001201655.1_5237_8_4	-	Y09500720
Escherichia coli MRSN 10204	1409953	PRJNA223619	223619	Proteobacteria	Gammaproteobacteria	5.11161	50.6	-	LBLW01	68	5377	5048	4/29/15	2/23/17	Contig	J. Craig Venter Institute	SAMN03486507	GCA_000982035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/035/GCA_000982035.1_ASM98203v1	-	MRSN 10204
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70245	52.2	-	MLVY01	46	4770	4516	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962121	GCA_001835315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/315/GCA_001835315.1_ASM183531v1	-	CFSAN045019
Staphylococcus aureus VET0215R	1422511	PRJNA228602	228602	Terrabacteria group	Firmicutes	2.81439	32.8	-	JIQZ01	48	2950	2747	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404094	GCA_000642335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/335/GCA_000642335.1_Stap_aure_VET0215R_V1	-	VET0215R
Staphylococcus aureus VET0216R	1422512	PRJNA228603	228603	Terrabacteria group	Firmicutes	2.81141	32.9	-	JIQY01	63	2948	2741	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404095	GCA_000642355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/355/GCA_000642355.1_Stap_aure_VET0216R_V1	-	VET0216R
Salmonella enterica subsp. enterica serovar Anatum	58712	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.63811	52.2	-	MLVZ01	24	4693	4475	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962123	GCA_001835345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/345/GCA_001835345.1_ASM183534v1	-	CFSAN045021
Escherichia coli DH5[alpha]	668369	PRJNA263864	263864	Proteobacteria	Gammaproteobacteria	4.50703	50.7	-	JRYM01	89	4661	4371	4/9/15	2/23/17	Contig	Korea Advanced Institute of Science and Technology	SAMN03107817	GCA_000982435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/435/GCA_000982435.1_ASM98243v1	-	DH5alpha
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.28819	65	-	CQSC01	362	4327	4039	3/23/15	3/10/17	Scaffold	SC	SAMEA1706680	GCA_001201895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/895/GCA_001201895.1_5227_6_11	-	O00100977
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.19057	39.4	-	CLYG01	97	2423	2169	3/21/15	3/4/17	Scaffold	SC	SAMEA1029097	GCA_001092925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/925/GCA_001092925.1_6983_7_52	-	SMRU2356
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.17959	39.5	-	CPNB01	71	2409	2188	3/23/15	3/4/17	Scaffold	SC	SAMEA682295	GCA_001092985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/985/GCA_001092985.1_5392_5_5	-	spnIC57
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.28312	65.3	-	CQRY01	336	4396	4053	3/22/15	3/10/17	Scaffold	SC	SAMEA1706709	GCA_001201915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/915/GCA_001201915.1_5227_6_1	-	J09800628
Escherichia coli NB8	1431454	PRJNA241479	241479	Proteobacteria	Gammaproteobacteria	5.11745	50.6	-	LBIS01	126	5426	5040	4/30/15	2/23/17	Contig	Ningbo First Hospital	SAMN02690696	GCA_000982875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/875/GCA_000982875.1_ASM98287v1	-	NB8
Salmonella enterica subsp. enterica serovar Rubislaw	598	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.98325	52.1	-	MLWB01	57	5117	4825	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962147	GCA_001835365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/365/GCA_001835365.1_ASM183536v1	-	CFSAN045025
Staphylococcus aureus VET0217R	1422513	PRJNA228604	228604	Terrabacteria group	Firmicutes	2.80872	32.9	-	JIQX01	55	2951	2742	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404096	GCA_000642375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/375/GCA_000642375.1_Stap_aure_VET0217R_V1	-	VET0217R
Staphylococcus aureus VET0218R	1422514	PRJNA228605	228605	Terrabacteria group	Firmicutes	2.80055	32.8	-	JIQW01	46	2944	2743	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404097	GCA_000642395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/395/GCA_000642395.1_Stap_aure_VET0218R_V1	-	VET0218R
Salmonella enterica subsp. enterica serovar Bareilly	58096	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.78264	52	-	MLWC01	54	4931	4645	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962148	GCA_001835385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/385/GCA_001835385.1_ASM183538v1	-	CFSAN045026
Escherichia coli	562	PRJNA280460	280460	Proteobacteria	Gammaproteobacteria	5.58034	50.5	-	LAZO01	11	6000	5487	4/30/15	2/23/17	Contig	Colorado State University	SAMN03462359	GCA_000986635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/986/635/GCA_000986635.1_ASM98663v1	26941140	C1-057
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.30697	65.4	-	CRZS01	163	4301	4039	3/22/15	3/11/17	Scaffold	SC	SAMEA968109	GCA_001201935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/935/GCA_001201935.1_5477_8_7	-	X00800994
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10337	39.6	-	CKSU01	66	2338	2114	3/21/15	3/4/17	Scaffold	SC	SAMEA1026058	GCA_001093085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/085/GCA_001093085.1_6823_1_11	-	SMRU1859
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.18044	39.6	-	CPOW01	211	2346	2145	3/22/15	3/4/17	Scaffold	SC	SAMEA682343	GCA_001093105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/105/GCA_001093105.1_5392_6_2	-	spnIC141
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.32112	65.4	-	CQRO01	244	4338	4037	3/23/15	3/10/17	Scaffold	SC	SAMEA1706705	GCA_001202555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/555/GCA_001202555.1_5227_5_12	-	J09800554
Escherichia coli	562	PRJNA280689	280689	Proteobacteria	Gammaproteobacteria	4.87786	50.6	-	LBBB01	305	5169	4740	5/1/15	2/23/17	Contig	Istituto Superiore di Sanita'	SAMN03466678	GCA_000987525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/987/525/GCA_000987525.1_ASM98752v1	26159534	BE127
Salmonella enterica subsp. enterica serovar Rubislaw	598	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.9786	52.1	-	MLWD01	47	5126	4816	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962149	GCA_001835405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/405/GCA_001835405.1_ASM183540v1	-	CFSAN045027
Staphylococcus aureus VET0221R	1422516	PRJNA228607	228607	Terrabacteria group	Firmicutes	2.79285	32.9	-	JIQU01	48	2902	2702	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404099	GCA_000642415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/415/GCA_000642415.1_Stap_aure_VET0221R_V1	-	VET0221R
Staphylococcus aureus VET0222R	1422517	PRJNA228608	228608	Terrabacteria group	Firmicutes	2.79332	32.8	-	JIQT01	45	2925	2718	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404100	GCA_000642435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/435/GCA_000642435.1_Stap_aure_VET0222R_V1	-	VET0222R
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70833	52.2	-	MLWW01	28	4755	4529	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962175	GCA_001835415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/415/GCA_001835415.1_ASM183541v1	-	CFSAN045053
Escherichia coli	562	PRJNA280693	280693	Proteobacteria	Gammaproteobacteria	4.94647	50.6	-	LBBD01	270	5242	4859	5/1/15	2/23/17	Contig	Istituto Superiore di Sanita'	SAMN03466682	GCA_000987535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/987/535/GCA_000987535.1_ASM98753v1	26159534	Pa1s
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.22383	65.3	-	CRYS01	421	4412	4001	3/23/15	3/11/17	Scaffold	SC	SAMEA968103	GCA_001202675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/675/GCA_001202675.1_5477_7_2	-	O00200127
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08833	39.7	-	CLXI01	57	2317	2105	3/21/15	3/4/17	Scaffold	SC	SAMEA1028807	GCA_001093185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/185/GCA_001093185.1_6983_5_24	-	SMRU2328
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10761	39.6	-	CIMQ01	77	2308	2082	3/21/15	3/14/17	Scaffold	SC	SAMEA1024718	GCA_001093305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/305/GCA_001093305.1_6730_5_3	-	SMRU651
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.29379	65.4	-	CQTB01	292	4350	4056	3/22/15	3/10/17	Scaffold	SC	SAMEA968082	GCA_001202715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/715/GCA_001202715.1_5237_5_11	-	K09901478
Escherichia coli	562	PRJNA280694	280694	Proteobacteria	Gammaproteobacteria	5.01245	50.5	-	LBBE01	282	5320	4898	5/1/15	2/23/17	Contig	Istituto Superiore di Sanita'	SAMN03466683	GCA_000987545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/987/545/GCA_000987545.1_ASM98754v1	26159534	avian5
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.75719	52.1	-	MLWX01	48	4842	4606	10/24/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04962176	GCA_001835445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/835/445/GCA_001835445.1_ASM183544v1	-	CFSAN045054
Staphylococcus aureus VET0224R	1422518	PRJNA228609	228609	Terrabacteria group	Firmicutes	2.78861	32.8	-	JIQS01	40	2900	2705	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404101	GCA_000642455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/455/GCA_000642455.1_Stap_aure_VET0224R_V1	-	VET0224R
Staphylococcus aureus VET0227R	1422519	PRJNA228610	228610	Terrabacteria group	Firmicutes	2.75919	32.9	-	JIQR01	30	2850	2670	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404102	GCA_000642475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/475/GCA_000642475.1_Stap_aure_VET0227R_V1	-	VET0227R
Salmonella enterica subsp. enterica serovar Stanley	192953	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.87747	52	-	MEKE01	44	4991	4715	11/14/16	7/21/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04155460	GCA_001878875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/875/GCA_001878875.1_ASM187887v1	-	CFSAN039535
Escherichia coli	562	PRJNA280690	280690	Proteobacteria	Gammaproteobacteria	4.96528	50.5	-	LBBC01	403	5328	4861	5/1/15	2/23/17	Contig	Istituto Superiore di Sanita'	SAMN03466680	GCA_000987555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/987/555/GCA_000987555.1_ASM98755v1	26159534	46zs
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.26464	65.3	-	CSAS01	389	4407	3890	3/23/15	3/10/17	Scaffold	SC	SAMEA968207	GCA_001202835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/835/GCA_001202835.1_6505_4_5	-	L00401786
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.03106	39.7	-	CRLC01	69	2232	2023	3/22/15	3/11/17	Scaffold	SC	SAMEA1025244	GCA_001093325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/325/GCA_001093325.1_6753_4_7	-	SMRU1543
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.10344	39.9	-	CPNQ01	106	2278	2070	3/23/15	3/11/17	Scaffold	SC	SAMEA682400	GCA_001093425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/425/GCA_001093425.1_5366_8_1	-	09B00295
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.29635	65.4	-	CRYX01	506	4491	4079	3/22/15	3/10/17	Scaffold	SC	SAMEA968180	GCA_001203055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/055/GCA_001203055.1_5319_2_2	-	N09900855
Escherichia coli	562	PRJNA280589	280589	Proteobacteria	Gammaproteobacteria	5.14543	50.6	-	LBBM01	104	5351	5051	5/8/15	2/23/17	Contig	Nanjing Agricultural University	SAMN03465348	GCA_001005605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/605/GCA_001005605.1_ASM100560v1	-	DE048
Salmonella enterica subsp. enterica serovar Pomona	570935	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.1266	52.1	-	MEKB01	180	5375	4988	11/14/16	7/14/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04155448	GCA_001878885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/885/GCA_001878885.1_ASM187888v1	-	CFSAN039526
Staphylococcus aureus VET0228R	1422520	PRJNA228611	228611	Terrabacteria group	Firmicutes	2.80545	32.8	-	JIQQ01	51	2916	2708	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404103	GCA_000642495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/495/GCA_000642495.1_Stap_aure_VET0228R_V1	-	VET0228R
Staphylococcus aureus VET0230R	1422522	PRJNA228613	228613	Terrabacteria group	Firmicutes	2.88105	32.9	-	JIQO01	43	3006	2813	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404105	GCA_000642515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/515/GCA_000642515.1_Stap_aure_VET0230R_V1	-	VET0230R
Salmonella enterica subsp. enterica serovar Give	46626	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.0185	52.1	-	MEKA01	113	5227	4870	11/14/16	7/14/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04155446	GCA_001878895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/895/GCA_001878895.1_ASM187889v1	-	CFSAN039524
Escherichia coli	562	PRJNA280577	280577	Proteobacteria	Gammaproteobacteria	5.20965	50.4	-	LBBN01	89	5585	5182	5/8/15	2/23/17	Contig	Nanjing Agricultural University	SAMN03465299	GCA_001005685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/005/685/GCA_001005685.1_ASM100568v1	-	K88
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.31612	65.3	-	CQTK01	246	4344	4063	3/23/15	3/10/17	Scaffold	SC	SAMEA968199	GCA_001203635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/635/GCA_001203635.1_5237_6_11	-	R00401166
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08722	39.5	-	CLWG01	60	2263	2042	3/21/15	3/11/17	Scaffold	SC	SAMEA1026216	GCA_001093445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/445/GCA_001093445.1_6983_4_89	-	SMRU2297
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11942	39.5	-	CLBD01	65	2326	2096	3/21/15	3/11/17	Scaffold	SC	SAMEA1025908	GCA_001093645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/645/GCA_001093645.1_6871_1_13	-	SMRU1789
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.28864	65.3	-	CQTG01	340	4413	4045	3/23/15	3/10/17	Scaffold	SC	SAMEA968076	GCA_001204175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/175/GCA_001204175.1_5237_5_9	-	I00601066
Escherichia coli	562	PRJNA279953	279953	Proteobacteria	Gammaproteobacteria	5.22491	50.7	-	LBDC01	59	5552	5094	5/18/15	2/23/17	Contig	Federal State Scientific-Industrial Company MICROGEN	SAMN03452282	GCA_001010165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/165/GCA_001010165.1_ASM101016v1	-	M17
Salmonella enterica subsp. enterica serovar Sandiego	1151002	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.83231	52	-	MEKF01	93	5049	4646	11/14/16	7/21/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04155462	GCA_001878935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/935/GCA_001878935.1_ASM187893v1	-	CFSAN039537
Staphylococcus aureus VET0236R	1422525	PRJNA228616	228616	Terrabacteria group	Firmicutes	2.82297	32.8	-	JIQL01	29	2945	2767	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404108	GCA_000642535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/535/GCA_000642535.1_Stap_aure_VET0236R_V1	-	VET0236R
Staphylococcus aureus VET0237R	1422526	PRJNA228617	228617	Terrabacteria group	Firmicutes	2.84061	32.9	-	JIQK01	39	2951	2775	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404109	GCA_000642555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/555/GCA_000642555.1_Stap_aure_VET0237R_V1	-	VET0237R
Salmonella enterica subsp. houtenae	59205	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74324	51.6	-	MEKC01	62	4786	4386	11/14/16	8/12/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04155455	GCA_001878945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/945/GCA_001878945.1_ASM187894v1	-	CFSAN039533
Escherichia coli	562	PRJNA279953	279953	Proteobacteria	Gammaproteobacteria	5.10519	50.7	-	LBDD01	42	5264	4956	5/18/15	2/23/17	Contig	Federal State Scientific-Industrial Company MICROGEN	SAMN03452284	GCA_001010195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/010/195/GCA_001010195.1_ASM101019v1	-	M17 - 1
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.30972	65.4	-	CRZL01	170	4303	4050	3/22/15	3/10/17	Scaffold	SC	SAMEA968133	GCA_001204235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/235/GCA_001204235.1_5477_8_8	-	K00700186
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09623	39.5	-	CMSQ01	46	2277	2061	3/23/15	3/11/17	Scaffold	SC	SAMEA2061949	GCA_001093665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/665/GCA_001093665.1_9803_8_8	-	19A
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14646	39.5	-	CKIX01	72	2397	2162	3/21/15	3/11/17	Scaffold	SC	SAMEA1023881	GCA_001093705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/705/GCA_001093705.1_6631_4_4	-	23A
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.25118	65.2	-	CQRV01	522	4469	3999	3/22/15	3/10/17	Scaffold	SC	SAMEA1706683	GCA_001204535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/535/GCA_001204535.1_5227_5_4	-	J09500385
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.065	50.6	-	LDDL01	147	5339	4949	5/22/15	2/23/17	Contig	FDA/CFSAN	SAMN03455811	GCA_001012025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/025/GCA_001012025.1_CFSAN026796_01.0	26430026	CFSAN026796
Salmonella enterica subsp. enterica serovar Kedougou	358771	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.02296	51.8	-	MEKD01	47	5177	4876	11/14/16	7/14/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04155456	GCA_001878965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/965/GCA_001878965.1_ASM187896v1	-	CFSAN039534
Staphylococcus aureus VET0241R	1422527	PRJNA228618	228618	Terrabacteria group	Firmicutes	2.80593	32.8	-	JIQJ01	33	2931	2744	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404110	GCA_000642575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/575/GCA_000642575.1_Stap_aure_VET0241R_V1	-	VET0241R
Staphylococcus aureus VET0243R	1422528	PRJNA228619	228619	Terrabacteria group	Firmicutes	2.84151	32.8	-	JIQI01	39	2966	2778	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404111	GCA_000642595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/595/GCA_000642595.1_Stap_aure_VET0243R_V1	-	VET0243R
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.78207	52.1	-	MEKG01	42	4854	4618	11/14/16	7/14/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04155466	GCA_001878985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/878/985/GCA_001878985.1_ASM187898v1	-	CFSAN039541
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.25921	50.5	-	LDCU01	199	5607	5145	5/22/15	2/23/17	Contig	FDA/CFSAN	SAMN03455820	GCA_001012075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/075/GCA_001012075.1_CFSAN026805_01.0	26430026	CFSAN026805
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.26231	65.4	-	CRZM01	162	4278	4023	3/23/15	3/10/17	Scaffold	SC	SAMEA968134	GCA_001204575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/575/GCA_001204575.1_5477_8_9	-	Z09600572
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.11302	39.8	-	CMEE01	77	2352	2129	3/21/15	3/11/17	Scaffold	SC	SAMEA1028990	GCA_001093725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/725/GCA_001093725.1_7011_4_4	-	SMRU2764
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.18005	39.4	-	CLDN01	99	2404	2155	3/21/15	3/11/17	Scaffold	SC	SAMEA1025993	GCA_001093765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/765/GCA_001093765.1_6899_5_16	-	SMRU2056
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.28242	65.3	-	CRYV01	272	4369	4053	3/23/15	3/10/17	Scaffold	SC	SAMEA968104	GCA_001204695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/695/GCA_001204695.1_5477_7_3	-	P09501258
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.98053	50.7	-	LDDG01	127	5224	4877	5/22/15	2/23/17	Contig	FDA/CFSAN	SAMN03455825	GCA_001012095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/095/GCA_001012095.1_CFSAN026810_01.0	26430026	CFSAN026810
Salmonella enterica subsp. enterica serovar Oranienburg	28147	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.62108	52.1	-	MEJL01	40	4668	4424	11/17/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04155440	GCA_001879765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/765/GCA_001879765.1_ASM187976v1	-	CFSAN039518
Staphylococcus aureus VET0247R	1422530	PRJNA228621	228621	Terrabacteria group	Firmicutes	2.80057	32.8	-	JIQG01	34	2907	2718	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404113	GCA_000642615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/615/GCA_000642615.1_Stap_aure_VET0247R_V1	-	VET0247R
Staphylococcus aureus VET0249R	1422531	PRJNA228622	228622	Terrabacteria group	Firmicutes	2.82622	32.8	-	JIQF01	33	2955	2776	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404114	GCA_000642635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/635/GCA_000642635.1_Stap_aure_VET0249R_V1	-	VET0249R
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.9949	51.9	-	MEJA01	157	5125	4758	11/17/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04155436	GCA_001879775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/775/GCA_001879775.1_ASM187977v1	-	CFSAN039514
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.09687	50.7	-	LDDV01	181	5403	4999	5/22/15	2/23/17	Contig	FDA/CFSAN	SAMN03455793	GCA_001012105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/105/GCA_001012105.1_CFSAN026778_02.0	26430026	CFSAN026778
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.27338	65.3	-	CQRT01	359	4412	4026	3/23/15	3/11/17	Scaffold	SC	SAMEA1706654	GCA_001204715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/715/GCA_001204715.1_5227_5_10	-	J09701593
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.15348	39.5	-	CMGN01	64	2395	2155	3/22/15	3/11/17	Scaffold	SC	SAMEA1029297	GCA_001093845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/845/GCA_001093845.1_7038_4_6	-	SMRU2934
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.10336	39.5	-	CMSA01	44	2307	2065	3/23/15	3/11/17	Scaffold	SC	SAMEA2061750	GCA_001093865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/865/GCA_001093865.1_9803_8_55	-	19A
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.32013	65.4	-	CQTQ01	240	4336	4074	3/22/15	3/10/17	Scaffold	SC	SAMEA968196	GCA_001204895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/895/GCA_001204895.1_5237_6_8	-	R09401839
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.02565	50.8	-	LDDT01	123	5292	4958	5/22/15	2/23/17	Contig	FDA/CFSAN	SAMN03455800	GCA_001012165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/165/GCA_001012165.1_CFSAN026785_02.0	26430026	CFSAN026785
Salmonella enterica subsp. enterica serovar Oranienburg	28147	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.62225	52.1	-	MEJK01	40	4672	4426	11/17/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04155438	GCA_001879785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/785/GCA_001879785.1_ASM187978v1	-	CFSAN039516
Staphylococcus aureus VET0252R	1422533	PRJNA228624	228624	Terrabacteria group	Firmicutes	2.80484	32.9	-	JIQD01	47	2911	2710	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404116	GCA_000642655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/655/GCA_000642655.1_Stap_aure_VET0252R_V1	-	VET0252R
Staphylococcus aureus VET0253R	1422534	PRJNA228625	228625	Terrabacteria group	Firmicutes	2.78865	32.8	-	JIQC01	43	2891	2699	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404117	GCA_000642675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/675/GCA_000642675.1_Stap_aure_VET0253R_V1	-	VET0253R
Salmonella enterica subsp. enterica serovar Oranienburg	28147	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.62301	52.1	-	MEJJ01	38	4670	4420	11/17/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04155437	GCA_001879795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/795/GCA_001879795.1_ASM187979v1	-	CFSAN039515
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.02594	50.8	-	LDDS01	103	5228	4908	5/22/15	2/23/17	Contig	FDA/CFSAN	SAMN03455802	GCA_001012175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/175/GCA_001012175.1_CFSAN026787_02.0	26430026	CFSAN026787
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.32408	65.1	-	CQTE01	379	4381	4023	3/23/15	3/11/17	Scaffold	SC	SAMEA968077	GCA_001205215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/215/GCA_001205215.1_5237_5_6	-	I09800059
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.01849	39.6	-	CPUH01	116	2199	1982	3/22/15	3/11/17	Scaffold	SC	SAMEA770011	GCA_001093905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/905/GCA_001093905.1_5192_8_7	-	11C/1
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10891	39.5	-	CKHU01	55	2321	2101	3/21/15	3/11/17	Scaffold	SC	SAMEA1024050	GCA_001093925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/925/GCA_001093925.1_6631_3_13	-	23F
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.3045	65.3	-	CSAH01	293	4374	3961	3/23/15	3/10/17	Scaffold	SC	SAMEA968153	GCA_001205295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/295/GCA_001205295.1_6505_2_3	-	I09702330
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.20958	50.4	-	LDDR01	212	5652	5179	5/22/15	2/23/17	Contig	FDA/CFSAN	SAMN03455803	GCA_001012195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/195/GCA_001012195.1_CFSAN026788_02.0	26430026	CFSAN026788
Salmonella enterica subsp. enterica serovar Oranienburg	28147	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.95913	51.9	-	MEJM01	89	5077	4736	11/17/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04155442	GCA_001879845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/845/GCA_001879845.1_ASM187984v1	-	CFSAN039520
Staphylococcus aureus VET0254R	1422535	PRJNA228626	228626	Terrabacteria group	Firmicutes	2.78484	32.9	-	JIQB01	29	2880	2699	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404118	GCA_000642695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/695/GCA_000642695.1_Stap_aure_VET0254R_V1	-	VET0254R
Staphylococcus aureus VET0256R	1422536	PRJNA228627	228627	Terrabacteria group	Firmicutes	2.81986	32.9	-	JIQA01	73	2946	2732	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404119	GCA_000642715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/715/GCA_000642715.1_Stap_aure_VET0256R_V1	-	VET0256R
Salmonella enterica subsp. enterica serovar Oranienburg	28147	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.62169	52.1	-	MEJN01	42	4674	4421	11/17/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04155443	GCA_001879855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/855/GCA_001879855.1_ASM187985v1	-	CFSAN039521
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.19289	50.4	-	LDDQ01	229	5649	5170	5/22/15	2/23/17	Contig	FDA/CFSAN	SAMN03455804	GCA_001012235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/235/GCA_001012235.1_CFSAN026789_01.0	26430026	CFSAN026789
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.30714	65.4	-	CQSV01	232	4329	4068	3/23/15	3/10/17	Scaffold	SC	SAMEA1706684	GCA_001205775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/775/GCA_001205775.1_5227_8_7	-	Q09600228
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15466	39.5	-	CKMA01	66	2405	2162	3/21/15	3/11/17	Scaffold	SC	SAMEA1888684	GCA_001093945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/945/GCA_001093945.1_6649_7_14	-	SMRU542
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99518	39.7	-	CQQU01	43	2204	1997	3/23/15	3/11/17	Scaffold	SC	SAMEA970256	GCA_001093965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/965/GCA_001093965.1_5159_6_2	-	BHN037
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.29351	65.3	-	CQTD01	352	4402	4048	3/22/15	3/10/17	Scaffold	SC	SAMEA968081	GCA_001206155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/155/GCA_001206155.1_5237_5_10	-	X00800532
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.18445	50.4	-	LDDP01	219	5641	5165	5/22/15	2/23/17	Contig	FDA/CFSAN	SAMN03455805	GCA_001012255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/255/GCA_001012255.1_CFSAN026790_01.0	26430026	CFSAN026790
Salmonella enterica subsp. enterica serovar Oranienburg	28147	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.0185	52.1	-	MEJP01	113	5214	4865	11/17/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04155445	GCA_001879865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/865/GCA_001879865.1_ASM187986v1	-	CFSAN039523
Staphylococcus aureus VET0259R	1422537	PRJNA228628	228628	Terrabacteria group	Firmicutes	2.82718	32.8	-	JIPZ01	27	2927	2758	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404120	GCA_000642735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/735/GCA_000642735.1_Stap_aure_VET0259R_V1	-	VET0259R
Staphylococcus aureus VET0260R	1422538	PRJNA228629	228629	Terrabacteria group	Firmicutes	2.8084	32.9	-	JIPY01	37	2916	2741	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404121	GCA_000642755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/755/GCA_000642755.1_Stap_aure_VET0260R_V1	-	VET0260R
Salmonella enterica subsp. enterica serovar Oranienburg	28147	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.62077	52.1	-	MEJO01	51	4677	4417	11/17/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04155444	GCA_001879905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/905/GCA_001879905.1_ASM187990v1	-	CFSAN039522
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.13572	50.4	-	LDDM01	202	5538	5058	5/22/15	2/23/17	Contig	FDA/CFSAN	SAMN03455854	GCA_001012265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/265/GCA_001012265.1_CFSAN026839_01.0	26430026	CFSAN026839
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.27515	65.2	-	CSAI01	405	4430	3887	3/22/15	3/11/17	Scaffold	SC	SAMEA968149	GCA_001206715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/715/GCA_001206715.1_6505_2_5	-	I09400970
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09163	39.6	-	CKVM01	60	2282	2033	3/21/15	3/11/17	Scaffold	SC	SAMEA1025897	GCA_001094145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/145/GCA_001094145.1_6823_4_16	-	SMRU1936
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.0966	39.7	-	CKPQ01	30	2316	2087	3/21/15	3/11/17	Scaffold	SC	SAMEA1024679	GCA_001094165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/165/GCA_001094165.1_6680_5_21	-	SMRU933
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.26592	65.4	-	CQSE01	236	4290	3984	3/23/15	3/11/17	Scaffold	SC	SAMEA1706682	GCA_001206955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/955/GCA_001206955.1_5227_7_1	-	O09501596
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.1728	50.4	-	LDDO01	217	5629	5159	5/22/15	2/23/17	Contig	FDA/CFSAN	SAMN03455806	GCA_001012275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/275/GCA_001012275.1_CFSAN026791_01.0	26430026	CFSAN026791
Salmonella enterica subsp. enterica serovar Oranienburg	28147	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70625	52	-	MEJQ01	72	4756	4488	11/17/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04155447	GCA_001879925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/925/GCA_001879925.1_ASM187992v1	-	CFSAN039525
Staphylococcus aureus VET0261R	1422539	PRJNA228630	228630	Terrabacteria group	Firmicutes	2.78003	32.9	-	JIPX01	43	2883	2686	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404122	GCA_000642775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/775/GCA_000642775.1_Stap_aure_VET0261R_V1	-	VET0261R
Staphylococcus aureus VET0263R	1422540	PRJNA228631	228631	Terrabacteria group	Firmicutes	2.78086	32.9	-	JIPW01	54	2882	2688	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404123	GCA_000642795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/795/GCA_000642795.1_Stap_aure_VET0263R_V1	-	VET0263R
Salmonella enterica subsp. enterica serovar Oranienburg	28147	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.85208	52	-	MEJW01	92	4957	4677	11/17/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04155454	GCA_001879935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/935/GCA_001879935.1_ASM187993v1	-	CFSAN039532
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.0834	50.7	-	LDDJ01	129	5383	5028	5/22/15	2/23/17	Contig	FDA/CFSAN	SAMN03455816	GCA_001012315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/315/GCA_001012315.1_CFSAN026801_01.0	26430026	CFSAN026801
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.28505	65.3	-	CSAL01	371	4407	3943	3/22/15	3/10/17	Scaffold	SC	SAMEA968150	GCA_001206975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/975/GCA_001206975.1_6505_2_4	-	I00200020
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10447	39.4	-	CKBY01	58	2351	2114	3/21/15	3/11/17	Scaffold	SC	SAMEA1024193	GCA_001094185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/185/GCA_001094185.1_6593_4_1	-	10B
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10189	39.7	-	CLHL01	44	2328	2084	3/21/15	3/11/17	Scaffold	SC	SAMEA1025988	GCA_001094205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/205/GCA_001094205.1_6925_5_3	-	SMRU2163
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.27318	65.3	-	CQSZ01	455	4456	4035	3/23/15	3/10/17	Scaffold	SC	SAMEA968212	GCA_001207075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/075/GCA_001207075.1_5237_5_2	-	W09900423
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.13662	50.5	-	LDDI01	127	5451	5049	5/22/15	2/23/17	Contig	FDA/CFSAN	SAMN03455817	GCA_001012335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/335/GCA_001012335.1_CFSAN026802_01.0	26430026	CFSAN026802
Salmonella enterica subsp. enterica serovar Oranienburg	28147	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.58366	52.1	-	MEJY01	43	4618	4375	11/17/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04155463	GCA_001879955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/955/GCA_001879955.1_ASM187995v1	-	CFSAN039538
Staphylococcus aureus VET0267R	1422541	PRJNA228632	228632	Terrabacteria group	Firmicutes	2.78139	32.9	-	JIPV01	27	2886	2709	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404124	GCA_000642815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/815/GCA_000642815.1_Stap_aure_VET0267R_V1	-	VET0267R
Staphylococcus aureus VET0268R	1422542	PRJNA228633	228633	Terrabacteria group	Firmicutes	2.80685	32.8	-	JIPU01	42	2933	2748	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404125	GCA_000642835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/835/GCA_000642835.1_Stap_aure_VET0268R_V1	-	VET0268R
Salmonella enterica subsp. enterica serovar Oranienburg	28147	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.969	51.9	-	MEJZ01	110	5106	4768	11/17/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04155465	GCA_001879975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/975/GCA_001879975.1_ASM187997v1	-	CFSAN039540
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.05239	50.7	-	LDDH01	97	5286	4962	5/22/15	2/23/17	Contig	FDA/CFSAN	SAMN03455824	GCA_001012345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/345/GCA_001012345.1_CFSAN026809_01.0	26430026	CFSAN026809
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.28883	65.3	-	CRZU01	228	4359	4039	3/23/15	3/11/17	Scaffold	SC	SAMEA968113	GCA_001207215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/215/GCA_001207215.1_5477_8_5	-	W09900339
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.05442	39.6	-	CRER01	36	2241	1998	3/23/15	3/15/17	Scaffold	SC	SAMEA1024870	GCA_001094325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/325/GCA_001094325.1_6731_6_11	-	SMRU1115
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.0776	39.6	-	CLBE01	64	2287	2066	3/21/15	3/4/17	Scaffold	SC	SAMEA1025854	GCA_001094345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/345/GCA_001094345.1_6871_1_10	-	SMRU1786
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.31961	65.4	-	CSAQ01	270	4339	3990	3/22/15	3/11/17	Scaffold	SC	SAMEA968191	GCA_001207555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/555/GCA_001207555.1_6505_4_2	-	K00201415
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.09311	50.7	-	LDDF01	128	5324	4986	5/22/15	2/23/17	Contig	FDA/CFSAN	SAMN03455827	GCA_001012355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/355/GCA_001012355.1_CFSAN026812_01.0	26430026	CFSAN026812
Salmonella enterica subsp. enterica serovar Oranienburg	28147	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.62313	52.1	-	MEJR01	44	4677	4432	11/17/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04155449	GCA_001880005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/005/GCA_001880005.1_ASM188000v1	-	CFSAN039527
Staphylococcus aureus VET0269R	1422543	PRJNA228634	228634	Terrabacteria group	Firmicutes	2.81983	32.8	-	JIPT01	47	2926	2761	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404126	GCA_000642855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/855/GCA_000642855.1_Stap_aure_VET0269R_V1	-	VET0269R
Staphylococcus aureus VET0270R	1422544	PRJNA228635	228635	Terrabacteria group	Firmicutes	2.73868	32.8	-	JIPS01	34	2812	2621	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404127	GCA_000642875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/875/GCA_000642875.1_Stap_aure_VET0270R_V1	-	VET0270R
Salmonella enterica subsp. enterica serovar Oranienburg	28147	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.62485	52.1	-	MEJS01	75	4674	4421	11/17/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04155450	GCA_001880015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/015/GCA_001880015.1_ASM188001v1	-	CFSAN039528
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.95238	50.5	-	LDDE01	176	5310	4783	5/22/15	2/23/17	Contig	FDA/CFSAN	SAMN03455828	GCA_001012395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/395/GCA_001012395.1_CFSAN026813_01.0	26430026	CFSAN026813
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.29203	65.3	-	CQSM01	271	4341	4051	3/23/15	3/10/17	Scaffold	SC	SAMEA1706708	GCA_001207945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/945/GCA_001207945.1_5227_7_9	-	P00301553
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.04078	39.6	-	CMDT01	62	2232	1970	3/21/15	3/4/17	Scaffold	SC	SAMEA1029069	GCA_001094365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/365/GCA_001094365.1_7011_4_14	-	SMRU2774
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.12085	39.5	-	CKNA01	61	2322	2091	3/21/15	3/4/17	Scaffold	SC	SAMEA1023806	GCA_001094545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/545/GCA_001094545.1_6649_8_19	-	19A
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.26291	65.2	-	CQUE01	574	4518	3990	3/23/15	3/11/17	Scaffold	SC	SAMEA968174	GCA_001207985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/985/GCA_001207985.1_5237_8_7	-	M00018020
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.2506	50.5	-	LDDB01	253	5682	5258	5/22/15	2/23/17	Contig	FDA/CFSAN	SAMN03455843	GCA_001012435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/435/GCA_001012435.1_CFSAN026828_01.0	26430026	CFSAN026828
Salmonella enterica subsp. enterica serovar Oranienburg	28147	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.62257	52.1	-	MEJT01	55	4675	4426	11/17/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04155451	GCA_001880025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/025/GCA_001880025.1_ASM188002v1	-	CFSAN039529
Staphylococcus aureus VET0271R	1422545	PRJNA228636	228636	Terrabacteria group	Firmicutes	2.73823	32.8	-	JIPR01	36	2773	2620	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404128	GCA_000642895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/895/GCA_000642895.1_Stap_aure_VET0271R_V1	-	VET0271R
Staphylococcus aureus VET0275R	1422546	PRJNA228637	228637	Terrabacteria group	Firmicutes	2.80776	32.8	-	JIPQ01	43	2927	2730	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404129	GCA_000642915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/915/GCA_000642915.1_Stap_aure_VET0275R_V1	-	VET0275R
Salmonella enterica subsp. enterica serovar Oranienburg	28147	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.98404	52	-	MEJU01	83	5115	4768	11/17/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04155452	GCA_001880035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/035/GCA_001880035.1_ASM188003v1	-	CFSAN039530
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.24437	50.6	-	LDDA01	206	5628	5226	5/22/15	2/23/17	Contig	FDA/CFSAN	SAMN03455845	GCA_001012475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/475/GCA_001012475.1_CFSAN026830_01.0	26430026	CFSAN026830
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.25024	65.1	-	CRZW01	614	4521	3786	3/23/15	3/10/17	Scaffold	SC	SAMEA968184	GCA_001208165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/165/GCA_001208165.1_6505_1_10	-	G00101715
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	1.97334	39.8	-	CMVL01	48	2145	1918	3/23/15	3/4/17	Scaffold	SC	SAMEA1022790	GCA_001094565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/565/GCA_001094565.1_5750_2_6	-	246
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.03355	39.7	-	CMED01	74	2237	2031	3/21/15	3/4/17	Scaffold	SC	SAMEA1028620	GCA_001094585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/585/GCA_001094585.1_7011_4_22	-	SMRU2782
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.29002	65.3	-	CQSP01	283	4345	4077	3/23/15	3/11/17	Scaffold	SC	SAMEA1706659	GCA_001208465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/465/GCA_001208465.1_5227_8_1	-	P09501583
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.33681	50.5	-	LDCZ01	169	5675	5216	5/22/15	2/23/17	Contig	FDA/CFSAN	SAMN03455850	GCA_001012495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/495/GCA_001012495.1_CFSAN026835_01.0	26430026	CFSAN026835
Salmonella enterica subsp. enterica serovar Oranienburg	28147	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.00474	52	-	MEJV01	117	5164	4817	11/17/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04155453	GCA_001880085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/085/GCA_001880085.1_ASM188008v1	-	CFSAN039531
Staphylococcus aureus VET0278R	1422547	PRJNA228638	228638	Terrabacteria group	Firmicutes	2.8197	32.9	-	JIPP01	57	2950	2761	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404130	GCA_000642935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/935/GCA_000642935.1_Stap_aure_VET0278R_V1	-	VET0278R
Staphylococcus aureus VET0279R	1422548	PRJNA228639	228639	Terrabacteria group	Firmicutes	2.75814	32.8	-	JIPO01	29	2867	2681	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404131	GCA_000642955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/955/GCA_000642955.1_Stap_aure_VET0279R_V1	-	VET0279R
Salmonella enterica subsp. enterica serovar Oranienburg	28147	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.61964	52.1	-	MEJX01	34	4670	4422	11/17/16	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN04155461	GCA_001880105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/880/105/GCA_001880105.1_ASM188010v1	-	CFSAN039536
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.21085	50.7	-	LDCX01	130	5568	5226	5/22/15	2/23/17	Contig	FDA/CFSAN	SAMN03455857	GCA_001012535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/535/GCA_001012535.1_CFSAN026842_02.0	26430026	CFSAN026842
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.22992	65.3	-	CQSJ01	388	4360	4008	3/23/15	3/10/17	Scaffold	SC	SAMEA1706674	GCA_001208525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/525/GCA_001208525.1_5227_6_9	-	O09700898
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08072	39.6	-	CLBJ01	147	2283	2058	3/21/15	3/4/17	Scaffold	SC	SAMEA1025944	GCA_001094665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/665/GCA_001094665.1_6871_1_11	-	SMRU1787
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.18993	39.4	-	CMDN01	85	2434	2202	3/21/15	3/4/17	Scaffold	SC	SAMEA1029110	GCA_001094725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/725/GCA_001094725.1_7011_3_4	-	SMRU2740
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.28835	65.3	-	CQTC01	396	4421	4033	3/23/15	3/10/17	Scaffold	SC	SAMEA968214	GCA_001208625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/625/GCA_001208625.1_5237_5_4	-	W09900442
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.08897	50.5	-	LDCV01	95	5417	5065	5/22/15	2/23/17	Contig	FDA/CFSAN	SAMN03455860	GCA_001012575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/575/GCA_001012575.1_CFSAN026845_01.0	26430026	CFSAN026845
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA350897	350897	Proteobacteria	Gammaproteobacteria	5.0355	52.2	-	MPJV01	60	5204	4950	11/18/16	3/2/17	Contig	University of Glasgow	SAMN05949357	GCA_001884505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/505/GCA_001884505.1_ASM188450v1	-	SL7207
Staphylococcus aureus VET0280R	1422549	PRJNA228640	228640	Terrabacteria group	Firmicutes	2.76712	32.9	-	JIPN01	34	2871	2681	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404132	GCA_000642975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/975/GCA_000642975.1_Stap_aure_VET0280R_V1	-	VET0280R
Staphylococcus aureus VET0282R	1422550	PRJNA228641	228641	Terrabacteria group	Firmicutes	2.81115	32.9	-	JIPM01	42	2937	2743	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404133	GCA_000642995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/642/995/GCA_000642995.1_Stap_aure_VET0282R_V1	-	VET0282R
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA348742	348742	Proteobacteria	Gammaproteobacteria	4.79345	52.1	-	MLJQ01	80	4865	4597	12/7/16	3/2/17	Contig	USDA ARS	SAMN05915002	GCA_001890825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/825/GCA_001890825.1_ASM189082v1	-	SAL2606
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.84589	50.6	-	LDCT01	153	5019	4669	5/22/15	2/23/17	Contig	FDA/CFSAN	SAMN03455789	GCA_001012585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/585/GCA_001012585.1_CFSAN026774_02.0	-	CFSAN026774
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.3235	65.4	-	CRZR01	161	4294	4032	3/23/15	3/10/17	Scaffold	SC	SAMEA968110	GCA_001208765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/765/GCA_001208765.1_5477_8_6	-	W09900252
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.07361	39.5	-	CLVA01	74	2267	2056	3/21/15	3/11/17	Scaffold	SC	SAMEA1025889	GCA_001094805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/805/GCA_001094805.1_6983_2_8	-	SMRU2216
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.12518	39.6	-	CKBB01	62	2345	2079	3/21/15	3/11/17	Scaffold	SC	SAMEA974632	GCA_001094865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/865/GCA_001094865.1_6259_7_16	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.294	65.3	-	CQTJ01	338	4392	4071	3/23/15	3/11/17	Scaffold	SC	SAMEA968171	GCA_001209145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/145/GCA_001209145.1_5237_6_2	-	Q09901557
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.24898	50.7	-	LDCS01	83	5550	5188	5/22/15	2/23/17	Contig	FDA/CFSAN	SAMN03455831	GCA_001012615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/615/GCA_001012615.1_CFSAN026816_01.0	-	CFSAN026816
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA348742	348742	Proteobacteria	Gammaproteobacteria	4.78817	52.1	-	MLJT01	55	4852	4604	12/7/16	3/2/17	Contig	USDA ARS	SAMN05915177	GCA_001890835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/835/GCA_001890835.1_ASM189083v1	-	SAL2609
Staphylococcus aureus VET0283R	1422551	PRJNA228642	228642	Terrabacteria group	Firmicutes	2.84053	33	-	JIPL01	37	2941	2744	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404134	GCA_000643015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/015/GCA_000643015.1_Stap_aure_VET0283R_V1	-	VET0283R
Staphylococcus aureus VET0284R	1422552	PRJNA228643	228643	Terrabacteria group	Firmicutes	2.82964	32.9	-	JIPK01	51	2966	2770	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404135	GCA_000643035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/035/GCA_000643035.1_Stap_aure_VET0284R_V1	-	VET0284R
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA348742	348742	Proteobacteria	Gammaproteobacteria	5.12808	51.9	-	MLJR01	95	5295	5007	12/7/16	3/2/17	Contig	USDA ARS	SAMN05915003	GCA_001890845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/845/GCA_001890845.1_ASM189084v1	-	SAL2607
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.22423	50.5	-	LDCR01	182	5618	5195	5/22/15	2/24/17	Contig	FDA/CFSAN	SAMN03455833	GCA_001012635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/635/GCA_001012635.1_CFSAN026818_01.0	-	CFSAN026818
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.23294	65.3	-	CQSH01	338	4344	4005	3/23/15	3/10/17	Scaffold	SC	SAMEA1706666	GCA_001209385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/385/GCA_001209385.1_5227_6_8	-	O09401777
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.18305	39.6	-	CLBT01	79	2439	2212	3/21/15	3/11/17	Scaffold	SC	SAMEA1025780	GCA_001094885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/885/GCA_001094885.1_6871_1_4	-	SMRU1780
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.26033	39.4	-	CMDB01	96	2536	2259	3/21/15	3/14/17	Scaffold	SC	SAMEA1028616	GCA_001094905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/905/GCA_001094905.1_7011_3_10	-	SMRU2746
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.30005	65.3	-	CRZC01	204	4348	4073	3/23/15	3/10/17	Scaffold	SC	SAMEA968106	GCA_001209445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/445/GCA_001209445.1_5477_7_5	-	Q09701888
Escherichia coli	562	PRJNA264948	264948	Proteobacteria	Gammaproteobacteria	5.18855	50.8	-	JSXJ01	187	5459	5091	6/17/15	2/23/17	Contig	University of Hyderabad	SAMN03144582	GCA_001029415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/029/415/GCA_001029415.1_ASM102941v1	26195517	NA097
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA348742	348742	Proteobacteria	Gammaproteobacteria	4.81205	52.1	-	MLJS01	74	4890	4639	12/7/16	3/2/17	Contig	USDA ARS	SAMN05915157	GCA_001890855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/890/855/GCA_001890855.1_ASM189085v1	-	SAL2608
Staphylococcus aureus VET0286R	1422553	PRJNA228644	228644	Terrabacteria group	Firmicutes	2.75384	32.8	-	JIPJ01	43	2875	2679	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404136	GCA_000643055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/055/GCA_000643055.1_Stap_aure_VET0286R_V1	-	VET0286R
Staphylococcus aureus VET0287R	1422554	PRJNA228645	228645	Terrabacteria group	Firmicutes	2.83471	32.9	-	JIPI01	37	2931	2740	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404137	GCA_000643075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/075/GCA_000643075.1_Stap_aure_VET0287R_V1	-	VET0287R
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA341823	341823	Proteobacteria	Gammaproteobacteria	4.71138	52.3	-	MRUU01	44	4831	4566	12/16/16	7/11/17	Contig	NARIC	SAMN06099114	GCA_001906505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/505/GCA_001906505.1_ASM190650v1	28254986	SI15023h
Escherichia coli	562	PRJNA284656	284656	Proteobacteria	Gammaproteobacteria	5.73508	50.7	-	LDXH02	23	6237	5719	6/24/15	9/21/17	Contig	Anses	SAMN03704965	GCA_001039125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/125/GCA_001039125.2_ASM103912v2	-	36079
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.30336	65.3	-	CQTR01	426	4466	4018	3/22/15	3/11/17	Scaffold	SC	SAMEA968194	GCA_001209585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/585/GCA_001209585.1_5237_7_3	-	T09601545
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.19496	39.4	-	CLRU01	92	2426	2178	3/21/15	3/11/17	Scaffold	SC	SAMEA1028739	GCA_001094945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/945/GCA_001094945.1_6972_3_20	-	SMRU2588
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99029	39.7	-	CQQO01	45	2202	1998	3/23/15	3/11/17	Scaffold	SC	SAMEA970279	GCA_001094985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/985/GCA_001094985.1_5159_5_9	-	BHN610
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.28162	65.3	-	CQTF01	363	4397	4034	3/23/15	3/10/17	Scaffold	SC	SAMEA968098	GCA_001209665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/665/GCA_001209665.1_5237_5_7	-	I00300092
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.11769	50.7	-	JWEG01	330	5325	5013	7/10/15	2/23/17	Contig	University of Washington	SAMN03197028	GCA_001052755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/755/GCA_001052755.1_ASM105275v1	26230489	1066.rep1_ECOL
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA341823	341823	Proteobacteria	Gammaproteobacteria	4.92528	52.1	-	MRUX01	58	5046	4701	12/16/16	7/11/17	Contig	NARIC	SAMN06099117	GCA_001906515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/515/GCA_001906515.1_ASM190651v1	28254986	SI1070/16
Staphylococcus aureus VET0288R	1422555	PRJNA228646	228646	Terrabacteria group	Firmicutes	2.75751	32.8	-	JIPH01	33	2849	2676	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404138	GCA_000643095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/095/GCA_000643095.1_Stap_aure_VET0288R_V1	-	VET0288R
Staphylococcus aureus VET0289R	1422556	PRJNA228647	228647	Terrabacteria group	Firmicutes	2.73729	32.9	-	JIPG01	25	2841	2658	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404139	GCA_000643115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/115/GCA_000643115.1_Stap_aure_VET0289R_V1	-	VET0289R
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA341823	341823	Proteobacteria	Gammaproteobacteria	4.69038	52.3	-	MRUV01	87	4825	4499	12/16/16	7/11/17	Contig	NARIC	SAMN06099115	GCA_001906525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/525/GCA_001906525.1_ASM190652v1	28254986	SI220h
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.02731	50.4	-	JVPI01	625	5291	4863	7/10/15	2/23/17	Contig	University of Washington	SAMN03197416	GCA_001054675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/675/GCA_001054675.1_ASM105467v1	26230489	223_ECOL
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.26015	65	-	CRZB01	349	4374	3775	3/22/15	3/11/17	Scaffold	SC	SAMEA968107	GCA_001209805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/805/GCA_001209805.1_5477_7_6	-	Q00501124
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08058	39.5	-	CIMJ01	66	2311	2055	3/21/15	3/11/17	Scaffold	SC	SAMEA1024940	GCA_001095005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/005/GCA_001095005.1_6680_6_15	-	SMRU951
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.02389	39.8	-	CPUX01	174	2156	2006	3/23/15	3/11/17	Scaffold	SC	SAMEA682360	GCA_001095025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/025/GCA_001095025.1_5366_6_9	-	08B09149
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.22113	65.3	-	CQUG01	454	4413	4004	3/23/15	3/10/17	Scaffold	SC	SAMEA968172	GCA_001209825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/825/GCA_001209825.1_5237_8_5	-	Z09901262
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.42404	50.7	-	JVMZ01	277	5721	5382	7/10/15	2/24/17	Contig	University of Washington	SAMN03197477	GCA_001054845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/845/GCA_001054845.1_ASM105484v1	26230489	283_ECOL
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA341823	341823	Proteobacteria	Gammaproteobacteria	4.98345	52.1	-	MRUW01	53	5108	4777	12/16/16	7/11/17	Contig	NARIC	SAMN06099116	GCA_001906535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/535/GCA_001906535.1_ASM190653v1	28254986	SI240/16
Staphylococcus aureus VET0290R	1422557	PRJNA228648	228648	Terrabacteria group	Firmicutes	2.73288	32.9	-	JIPF01	23	2834	2655	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404140	GCA_000643135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/135/GCA_000643135.1_Stap_aure_VET0290R_V1	-	VET0290R
Staphylococcus aureus VET0291R	1422558	PRJNA228649	228649	Terrabacteria group	Firmicutes	2.72817	32.8	-	JIPE01	22	2834	2654	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404141	GCA_000643155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/155/GCA_000643155.1_Stap_aure_VET0291R_V1	-	VET0291R
Salmonella enterica subsp. enterica serovar Javiana	363569	PRJNA344415	344415	Proteobacteria	Gammaproteobacteria	4.56077	52.2	-	MKLX01	49	4634	4382	1/6/17	3/2/17	Contig	University of Florida	SAMN02802257	GCA_001938855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/855/GCA_001938855.1_ASM193885v1	-	FLDOH-11
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.90633	50.8	-	JVFF01	160	5051	4784	7/10/15	2/23/17	Contig	University of Washington	SAMN03197679	GCA_001056965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/965/GCA_001056965.1_ASM105696v1	26230489	486_ECOL
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.32024	65.4	-	CRZE01	167	4310	4058	3/22/15	3/10/17	Scaffold	SC	SAMEA968100	GCA_001209945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/945/GCA_001209945.1_5477_7_8	-	R09402296
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12708	39.7	-	CLAO01	57	2279	1980	3/21/15	3/11/17	Scaffold	SC	SAMEA1025634	GCA_001095045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/045/GCA_001095045.1_6841_7_12	-	SMRU1332
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.18967	39.6	-	CMDG01	64	2432	2197	3/21/15	3/11/17	Scaffold	SC	SAMEA1029073	GCA_001095165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/165/GCA_001095165.1_7011_3_20	-	SMRU2756
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.28332	65.3	-	CQSF01	399	4411	4027	3/23/15	3/10/17	Scaffold	SC	SAMEA1706693	GCA_001209965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/965/GCA_001209965.1_5227_6_3	-	J09900137
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.04774	50.7	-	JVFI01	320	5219	4906	7/10/15	2/24/17	Contig	University of Washington	SAMN03197676	GCA_001056975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/975/GCA_001056975.1_ASM105697v1	26230489	483_ECOL
Salmonella enterica subsp. enterica serovar Javiana	363569	PRJNA344415	344415	Proteobacteria	Gammaproteobacteria	4.558	52.2	-	MKMA01	77	4634	4384	1/6/17	3/2/17	Contig	University of Florida	SAMN03114954	GCA_001938865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/865/GCA_001938865.1_ASM193886v1	-	FLUFL-578
Staphylococcus aureus VET0292R	1422559	PRJNA228650	228650	Terrabacteria group	Firmicutes	2.81185	32.8	-	JIPD01	33	2957	2768	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404142	GCA_000643175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/175/GCA_000643175.1_Stap_aure_VET0292R_V1	-	VET0292R
Staphylococcus aureus VET0294R	1422561	PRJNA228652	228652	Terrabacteria group	Firmicutes	2.73623	32.9	-	JIPB01	29	2836	2653	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404144	GCA_000643195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/195/GCA_000643195.1_Stap_aure_VET0294R_V1	-	VET0294R
Salmonella enterica subsp. enterica serovar Javiana	363569	PRJNA344415	344415	Proteobacteria	Gammaproteobacteria	4.55987	52.2	-	MKLY01	51	4631	4387	1/6/17	3/2/17	Contig	University of Florida	SAMN03114950	GCA_001938885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/885/GCA_001938885.1_ASM193888v1	-	FLUFL-572
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.05905	50.8	-	JUXP01	392	5307	4984	7/10/15	2/23/17	Contig	University of Washington	SAMN03197877	GCA_001057895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/895/GCA_001057895.1_ASM105789v1	26230489	675_ECOL
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.28579	65.3	-	CRYY01	243	4347	4038	3/23/15	3/11/17	Scaffold	SC	SAMEA968118	GCA_001210105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/105/GCA_001210105.1_5477_7_11	-	EE0503811
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12025	39.4	-	CLQX01	53	2309	2074	3/21/15	3/11/17	Scaffold	SC	SAMEA1028692	GCA_001095185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/185/GCA_001095185.1_6972_2_14	-	SMRU2558
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.217	39.6	-	CPTP01	90	2475	2205	3/23/15	3/11/17	Scaffold	SC	SAMEA1408231	GCA_001095205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/205/GCA_001095205.1_7444_8_57	-	0112+27129
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.25944	65.3	-	CQTW01	537	4497	3994	3/23/15	3/11/17	Scaffold	SC	SAMEA968079	GCA_001210125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/125/GCA_001210125.1_5237_8_1	-	Y00015573
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.21156	50.5	-	JUWS01	266	5406	5064	7/10/15	2/23/17	Contig	University of Washington	SAMN03197900	GCA_001057995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/995/GCA_001057995.1_ASM105799v1	26230489	696_ECOL
Salmonella enterica subsp. enterica serovar Javiana	363569	PRJNA344415	344415	Proteobacteria	Gammaproteobacteria	4.55828	52.2	-	MKLZ01	49	4627	4384	1/6/17	3/2/17	Contig	University of Florida	SAMN03174585	GCA_001938925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/925/GCA_001938925.1_ASM193892v1	-	FLUFL-774
Staphylococcus aureus VET0295R	1422562	PRJNA228653	228653	Terrabacteria group	Firmicutes	2.74606	32.9	-	JIPA01	32	2840	2656	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404145	GCA_000643215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/215/GCA_000643215.1_Stap_aure_VET0295R_V1	-	VET0295R
Staphylococcus aureus VET0296R	1422563	PRJNA228654	228654	Terrabacteria group	Firmicutes	2.81284	32.9	-	JIOZ01	47	2936	2741	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404146	GCA_000643235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/235/GCA_000643235.1_Stap_aure_VET0296R_V1	-	VET0296R
"Salmonella enterica subsp. arizonae serovar 18:z4,z23:- str. CVM N18383"	1395111	PRJNA292661	292661	Proteobacteria	Gammaproteobacteria	4.50543	51.5	-	AWRK01	150	4501	4043	1/13/17	3/2/17	Contig	FDA	SAMN02887259	GCA_001951365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/365/GCA_001951365.1_ASM195136v1	-	N18383
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.14454	50.6	-	JUVO01	478	5356	5026	7/10/15	2/24/17	Contig	University of Washington	SAMN03197930	GCA_001058145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/145/GCA_001058145.1_ASM105814v1	26230489	725_ECOL
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.29642	65.4	-	CQSS01	242	4342	4074	3/23/15	3/11/17	Scaffold	SC	SAMEA1706698	GCA_001210305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/305/GCA_001210305.1_5227_8_11	-	Q09900809
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.1064	39.5	-	CRRI01	55	2293	2065	3/23/15	3/11/17	Scaffold	SC	SAMEA1025011	GCA_001095245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/245/GCA_001095245.1_6805_1_17	-	SMRU1025
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.15497	39.7	-	CMVC01	110	2340	2032	3/23/15	3/11/17	Scaffold	SC	SAMEA1991275	GCA_001095345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/345/GCA_001095345.1_5756_5_11	-	275
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.29903	65.4	-	CQSQ01	265	4334	4079	3/23/15	3/11/17	Scaffold	SC	SAMEA1706660	GCA_001210385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/385/GCA_001210385.1_5227_8_4	-	P09600222
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.14316	50.8	-	JUVL01	350	5376	5082	7/10/15	2/24/17	Contig	University of Washington	SAMN03197933	GCA_001058175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/175/GCA_001058175.1_ASM105817v1	26230489	729_ECOL
"Salmonella enterica subsp. arizonae serovar 18:z4,z23:- str. CVM N18503"	1395112	PRJNA292661	292661	Proteobacteria	Gammaproteobacteria	4.60469	51.5	-	AWRJ01	134	4651	4171	1/13/17	3/2/17	Contig	FDA	SAMN02887260	GCA_001951375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/375/GCA_001951375.1_ASM195137v1	-	N18503
Staphylococcus aureus VET0297R	1422564	PRJNA228655	228655	Terrabacteria group	Firmicutes	2.73254	32.8	-	JIOY01	28	2844	2657	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404147	GCA_000643255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/255/GCA_000643255.1_Stap_aure_VET0297R_V1	-	VET0297R
Staphylococcus aureus VET0299R	1422566	PRJNA228657	228657	Terrabacteria group	Firmicutes	2.74117	32.9	-	JIOW01	31	2841	2657	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404149	GCA_000643275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/275/GCA_000643275.1_Stap_aure_VET0299R_V1	-	VET0299R
"Salmonella enterica subsp. arizonae serovar 18:z4,z23:- str. CVM N18554"	1395113	PRJNA292661	292661	Proteobacteria	Gammaproteobacteria	4.51995	51.5	-	AWRI01	90	4535	4068	1/13/17	3/2/17	Contig	FDA	SAMN02887261	GCA_001951435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/435/GCA_001951435.1_ASM195143v1	-	N18554
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.06537	50.7	-	JUVD01	283	5291	5017	7/10/15	2/23/17	Contig	University of Washington	SAMN03197941	GCA_001058205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/205/GCA_001058205.1_ASM105820v1	26230489	736_ECOL
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.31291	65.4	-	CSAR01	288	4363	3966	3/23/15	3/11/17	Scaffold	SC	SAMEA968122	GCA_001210505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/505/GCA_001210505.1_6505_4_6	-	M09400328
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.05734	39.7	-	CKRH01	64	2246	2044	3/21/15	3/11/17	Scaffold	SC	SAMEA1024865	GCA_001095385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/385/GCA_001095385.1_6680_7_9	-	SMRU969
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.04604	39.7	-	CRJP01	54	2289	2045	3/23/15	3/11/17	Scaffold	SC	SAMEA1025598	GCA_001095445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/445/GCA_001095445.1_6753_2_21	-	SMRU1510
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.28104	65.4	-	CRZI01	212	4339	4043	3/22/15	3/11/17	Scaffold	SC	SAMEA968159	GCA_001210525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/525/GCA_001210525.1_5505_8_11	-	SAWC507
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.67698	50.5	-	JUUY01	128	4699	4501	7/10/15	2/23/17	Contig	University of Washington	SAMN03197946	GCA_001058225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/225/GCA_001058225.1_ASM105822v1	26230489	740_ECOL
"Salmonella enterica subsp. arizonae serovar 18:z4,z23:- str. CVM N23850"	1395115	PRJNA292661	292661	Proteobacteria	Gammaproteobacteria	5.04092	52.2	-	AWRG01	70	5229	4987	1/13/17	3/2/17	Contig	FDA	SAMN02887263	GCA_001951445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/445/GCA_001951445.1_ASM195144v1	-	N23850
Staphylococcus aureus VET0300R	1422567	PRJNA228658	228658	Terrabacteria group	Firmicutes	2.83789	32.8	-	JIOV01	38	2968	2777	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404150	GCA_000643295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/295/GCA_000643295.1_Stap_aure_VET0300R_V1	-	VET0300R
Staphylococcus aureus VET0302R	1422569	PRJNA228660	228660	Terrabacteria group	Firmicutes	2.83349	32.9	-	JIOT01	64	2946	2747	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404152	GCA_000643315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/315/GCA_000643315.1_Stap_aure_VET0302R_V1	-	VET0302R
"Salmonella enterica subsp. arizonae serovar 18:z4,z23:- str. CVM N26626"	1395119	PRJNA292661	292661	Proteobacteria	Gammaproteobacteria	4.63526	51.5	-	AWRC01	98	4683	4221	1/13/17	3/2/17	Contig	FDA	SAMN02887267	GCA_001951455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/455/GCA_001951455.1_ASM195145v1	-	N26626
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.126	50.8	-	JUUR01	369	5356	5061	7/10/15	2/24/17	Contig	University of Washington	SAMN03197953	GCA_001058255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/255/GCA_001058255.1_ASM105825v1	26230489	747_ECOL
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.29783	65.3	-	CQTT01	367	4400	4050	3/22/15	3/11/17	Scaffold	SC	SAMEA968197	GCA_001210545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/545/GCA_001210545.1_5237_6_9	-	R09500613
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.07238	39.7	-	CMEZ01	47	2281	2034	3/21/15	3/11/17	Scaffold	SC	SAMEA1028737	GCA_001095505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/505/GCA_001095505.1_7011_5_5	-	SMRU2789
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.16583	39.7	-	CLJN01	55	2414	2187	3/21/15	3/11/17	Scaffold	SC	SAMEA1029123	GCA_001095565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/565/GCA_001095565.1_6925_8_1	-	SMRU2521
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.1971	65.1	-	CQUF01	940	4629	3878	3/23/15	3/11/17	Scaffold	SC	SAMEA968080	GCA_001210665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/665/GCA_001210665.1_5237_8_2	-	Y00015898
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.15008	50.8	-	JUUQ01	320	5384	5089	7/10/15	2/24/17	Contig	University of Washington	SAMN03197954	GCA_001058275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/275/GCA_001058275.1_ASM105827v1	26230489	748_ECOL
"Salmonella enterica subsp. arizonae serovar 18:z4,z23:- str. CVM N4410"	1395107	PRJNA292661	292661	Proteobacteria	Gammaproteobacteria	4.59914	51.5	-	AWRO01	83	4633	4165	1/13/17	3/2/17	Contig	FDA	SAMN02887272	GCA_001951515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/515/GCA_001951515.1_ASM195151v1	-	N4410
Staphylococcus aureus VET0303R	1422570	PRJNA228661	228661	Terrabacteria group	Firmicutes	2.80498	32.9	-	JIOS01	40	2915	2715	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404153	GCA_000643335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/335/GCA_000643335.1_Stap_aure_VET0303R_V1	-	VET0303R
Staphylococcus aureus VET0304R	1422571	PRJNA228662	228662	Terrabacteria group	Firmicutes	2.83947	32.9	-	JIOR01	54	2967	2767	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404154	GCA_000643355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/355/GCA_000643355.1_Stap_aure_VET0304R_V1	-	VET0304R
"Salmonella enterica subsp. arizonae serovar 18:z4,z23:- str. CVM N25373"	1395116	PRJNA292661	292661	Proteobacteria	Gammaproteobacteria	4.49131	51.5	-	AWRF01	89	4495	4030	1/13/17	3/2/17	Contig	FDA	SAMN02887264	GCA_001951535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/535/GCA_001951535.1_ASM195153v1	-	N25373
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.67054	50.6	-	JUUK01	245	4704	4473	7/10/15	2/24/17	Contig	University of Washington	SAMN03197960	GCA_001058315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/315/GCA_001058315.1_ASM105831v1	26230489	753_ECOL
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.25023	65.3	-	CRZO01	291	4361	4027	3/22/15	3/11/17	Scaffold	SC	SAMEA968131	GCA_001210825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/825/GCA_001210825.1_5477_8_10	-	N00400624
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.06662	39.6	-	CKZT01	68	2240	1999	3/21/15	3/11/17	Scaffold	SC	SAMEA1026096	GCA_001095605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/605/GCA_001095605.1_6840_3_13	-	SMRU1813
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.14621	39.6	-	CKXT01	125	2395	2122	3/21/15	3/14/17	Scaffold	SC	SAMEA1025771	GCA_001095725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/725/GCA_001095725.1_6823_7_2	-	SMRU1994
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.30858	65.4	-	CQTL01	308	4400	4065	3/22/15	3/11/17	Scaffold	SC	SAMEA968170	GCA_001211105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/105/GCA_001211105.1_5237_6_3	-	Q09901859
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.15438	50.9	-	JUTZ01	272	5400	5090	7/10/15	2/24/17	Contig	University of Washington	SAMN03197971	GCA_001058375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/375/GCA_001058375.1_ASM105837v1	26230489	762_ECOL
"Salmonella enterica subsp. arizonae serovar 18:z4,z23:- str. CVM N26624"	1395117	PRJNA292661	292661	Proteobacteria	Gammaproteobacteria	4.52682	51.5	-	AWRE01	94	4544	4080	1/13/17	3/2/17	Contig	FDA	SAMN02887265	GCA_001951545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/545/GCA_001951545.1_ASM195154v1	-	N26624
Staphylococcus aureus VET0305R	1422572	PRJNA228663	228663	Terrabacteria group	Firmicutes	2.82016	32.9	-	JIOQ01	51	2935	2743	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404155	GCA_000643375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/375/GCA_000643375.1_Stap_aure_VET0305R_V1	-	VET0305R
Staphylococcus aureus VET0307R	1422574	PRJNA228665	228665	Terrabacteria group	Firmicutes	2.81371	32.9	-	JIOO01	50	2947	2739	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404157	GCA_000643395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/395/GCA_000643395.1_Stap_aure_VET0307R_V1	-	VET0307R
"Salmonella enterica subsp. arizonae serovar 18:z4,z23:- str. CVM N26625"	1395118	PRJNA292661	292661	Proteobacteria	Gammaproteobacteria	4.6281	51.5	-	AWRD01	81	4674	4215	1/13/17	3/2/17	Contig	FDA	SAMN02887266	GCA_001951625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/625/GCA_001951625.1_ASM195162v1	-	N26625
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.1014	50.4	-	JUYO01	307	5260	4953	7/10/15	2/23/17	Contig	University of Washington	SAMN03197852	GCA_001058795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/795/GCA_001058795.1_ASM105879v1	26230489	650_ECOL
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.31701	65.3	-	CQTN01	262	4328	4061	3/23/15	3/11/17	Scaffold	SC	SAMEA968163	GCA_001211205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/205/GCA_001211205.1_5237_6_6	-	R00301759
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.09817	39.6	-	CKOW01	27	2296	2027	3/21/15	3/15/17	Scaffold	SC	SAMEA1024739	GCA_001095765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/765/GCA_001095765.1_6680_4_14	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.01805	39.7	-	CKMQ01	67	2211	1972	3/21/15	3/15/17	Scaffold	SC	SAMEA1023779	GCA_001095805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/805/GCA_001095805.1_6649_8_18	-	4
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.30125	65.3	-	CQTZ01	363	4412	4037	3/23/15	3/11/17	Scaffold	SC	SAMEA968119	GCA_001211425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/425/GCA_001211425.1_5237_7_8	-	T09800777
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.89001	50.5	-	JUXA01	213	4940	4686	7/10/15	2/24/17	Contig	University of Washington	SAMN03197892	GCA_001058895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/895/GCA_001058895.1_ASM105889v1	26230489	689_ECOL
Salmonella enterica subsp. enterica serovar Infantis str. CVM N15773	1439833	PRJNA231478	231478	Proteobacteria	Gammaproteobacteria	4.56472	52.3	-	JAAP01	48	4598	4355	1/13/17	3/2/17	Contig	FDA	SAMN02442745	GCA_001951705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/705/GCA_001951705.1_ASM195170v1	-	CVM N15773
Staphylococcus aureus VET0308R	1422575	PRJNA228666	228666	Terrabacteria group	Firmicutes	2.83366	32.8	-	JION01	30	2957	2778	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404158	GCA_000643415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/415/GCA_000643415.1_Stap_aure_VET0308R_V1	-	VET0308R
Staphylococcus aureus VET0309R	1422576	PRJNA228667	228667	Terrabacteria group	Firmicutes	2.84137	32.9	-	JIOM01	38	2957	2766	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404159	GCA_000643435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/435/GCA_000643435.1_Stap_aure_VET0309R_V1	-	VET0309R
Salmonella enterica subsp. enterica serovar Infantis str. CVM N23532	1439837	PRJNA231478	231478	Proteobacteria	Gammaproteobacteria	4.69916	52.2	-	JAAT01	56	4811	4558	1/13/17	3/2/17	Contig	FDA	SAMN02442749	GCA_001951765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/765/GCA_001951765.1_ASM195176v1	-	CVM N23532
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.93924	50.7	-	JUWY01	377	5078	4763	7/10/15	2/24/17	Contig	University of Washington	SAMN03197894	GCA_001058915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/915/GCA_001058915.1_ASM105891v1	26230489	690_ECOL
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.32735	65.4	-	CRZD01	155	4323	4071	3/22/15	3/11/17	Scaffold	SC	SAMEA968116	GCA_001211465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/465/GCA_001211465.1_5477_7_9	-	R09801836
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.18783	39.6	-	CLOI01	68	2377	2153	3/21/15	3/4/17	Scaffold	SC	SAMEA1028829	GCA_001095845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/845/GCA_001095845.1_6949_1_5	-	SMRU2405
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	1.99562	39.7	-	CPPJ01	87	2167	1993	3/23/15	3/4/17	Scaffold	SC	SAMEA682481	GCA_001095905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/905/GCA_001095905.1_5366_7_3	-	08B10239
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.28793	65.3	-	CRZP01	362	4428	4031	3/23/15	3/11/17	Scaffold	SC	SAMEA968114	GCA_001211605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/605/GCA_001211605.1_5477_8_4	-	V09501561
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.14344	50.8	-	JUVQ01	365	5391	5096	7/10/15	2/24/17	Contig	University of Washington	SAMN03197928	GCA_001058965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/965/GCA_001058965.1_ASM105896v1	26230489	723_ECOL
Salmonella enterica subsp. enterica serovar Infantis str. CVM N23791	1443276	PRJNA231478	231478	Proteobacteria	Gammaproteobacteria	4.64333	52.3	-	JAAV01	39	4687	4460	1/13/17	3/2/17	Contig	FDA	SAMN02442751	GCA_001951775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/775/GCA_001951775.1_ASM195177v1	-	CVM N23791
Staphylococcus aureus VET0312R	1422577	PRJNA228668	228668	Terrabacteria group	Firmicutes	2.78031	32.8	-	JIOL01	36	2868	2694	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404160	GCA_000643455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/455/GCA_000643455.1_Stap_aure_VET0312R_V1	-	VET0312R
Staphylococcus aureus VET0313R	1422578	PRJNA228669	228669	Terrabacteria group	Firmicutes	2.81739	32.9	-	JIOK01	55	2985	2772	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404161	GCA_000643475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/475/GCA_000643475.1_Stap_aure_VET0313R_V1	-	VET0313R
Salmonella enterica	28901	PRJNA237790	237790	Proteobacteria	Gammaproteobacteria	4.88964	52.1	-	JHAP01	53	5018	4774	1/13/17	3/2/17	Contig	FDA/CVM	SAMN02639614	GCA_001951865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/865/GCA_001951865.1_ASM195186v1	-	CVM 21383
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.18379	50.4	-	JUVJ01	526	5396	5036	7/10/15	2/23/17	Contig	University of Washington	SAMN03197935	GCA_001059015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/015/GCA_001059015.1_ASM105901v1	26230489	730_ECOL
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.31723	65.4	-	CRYO01	301	4321	4069	3/22/15	3/11/17	Scaffold	SC	SAMEA968145	GCA_001211765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/765/GCA_001211765.1_5319_2_6	-	N00500759
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08125	39.5	-	CKXY01	53	2288	2045	3/21/15	3/4/17	Scaffold	SC	SAMEA1026220	GCA_001095945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/945/GCA_001095945.1_6823_7_15	-	SMRU2007
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11439	39.6	-	CKFH01	115	2337	2111	3/21/15	3/4/17	Scaffold	SC	SAMEA1024063	GCA_001096025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/025/GCA_001096025.1_6630_3_20	-	6C
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.29648	65.4	-	CRZN01	205	4299	4025	3/23/15	3/11/17	Scaffold	SC	SAMEA968188	GCA_001212345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/345/GCA_001212345.1_5505_8_7	-	EE0506178
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.29207	50.5	-	JUVE01	522	5510	5214	7/10/15	2/24/17	Contig	University of Washington	SAMN03197940	GCA_001059035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/035/GCA_001059035.1_ASM105903v1	26230489	735_ECOL
Salmonella enterica	28901	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.98767	52.1	-	MOEM01	86	5172	4847	1/13/17	3/2/17	Contig	Cornell University	SAMN04394778	GCA_001952055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/055/GCA_001952055.1_ASM195205v1	-	R8_3274_R1
Staphylococcus aureus VET0314R	1422579	PRJNA228670	228670	Terrabacteria group	Firmicutes	2.78234	32.9	-	JIOJ01	37	2890	2691	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404162	GCA_000643495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/495/GCA_000643495.1_Stap_aure_VET0314R_V1	-	VET0314R
Staphylococcus aureus VET0315R	1422580	PRJNA228671	228671	Terrabacteria group	Firmicutes	2.76868	32.8	-	JIOI01	22	2876	2699	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404163	GCA_000643515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/515/GCA_000643515.1_Stap_aure_VET0315R_V1	-	VET0315R
Salmonella enterica subsp. enterica serovar Infantis str. CVM N42459	1439851	PRJNA231478	231478	Proteobacteria	Gammaproteobacteria	4.89487	52.2	-	JABI01	58	5028	4776	1/13/17	3/2/17	Contig	FDA	SAMN02442766	GCA_001952205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/205/GCA_001952205.1_ASM195220v1	-	CVM N42459
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.67085	50.5	-	JUUW01	177	4701	4484	7/10/15	2/24/17	Contig	University of Washington	SAMN03197948	GCA_001059075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/075/GCA_001059075.1_ASM105907v1	26230489	742_ECOL
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.35423	65.4	-	LJIK01	285	4362	4124	9/15/15	3/11/17	Scaffold	Columbia University Mailman School of Public Health	SAMN03813781	GCA_001282445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/445/GCA_001282445.1_ASM128244v1	-	BE_10225
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.23396	39.4	-	CKIT01	102	2469	2236	3/21/15	3/4/17	Scaffold	SC	SAMEA1023831	GCA_001096045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/045/GCA_001096045.1_6631_4_12	-	6B
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.18091	39.6	-	CKVW01	88	2442	2217	3/21/15	3/4/17	Scaffold	SC	SAMEA1026028	GCA_001096125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/125/GCA_001096125.1_6823_4_9	-	SMRU1929
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.45607	65.5	-	LJIN01	269	4432	4182	9/15/15	3/11/17	Scaffold	Columbia University Mailman School of Public Health	SAMN03813787	GCA_001282465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/465/GCA_001282465.1_ASM128246v1	-	C130
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.14341	50.8	-	JUUS01	361	5382	5086	7/10/15	2/23/17	Contig	University of Washington	SAMN03197952	GCA_001059095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/095/GCA_001059095.1_ASM105909v1	26230489	746_ECOL
Salmonella enterica subsp. enterica serovar Infantis str. CVM N41903	1439849	PRJNA231478	231478	Proteobacteria	Gammaproteobacteria	4.65782	52.1	-	JABG01	57	4721	4484	1/13/17	3/2/17	Contig	FDA	SAMN02442764	GCA_001952215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/215/GCA_001952215.1_ASM195221v1	-	CVM N41903
Staphylococcus aureus VET0316R	1422581	PRJNA228672	228672	Terrabacteria group	Firmicutes	2.81759	32.9	-	JIOH01	59	2938	2750	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404164	GCA_000643535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/535/GCA_000643535.1_Stap_aure_VET0316R_V1	-	VET0316R
Staphylococcus aureus VET0317R	1422582	PRJNA228673	228673	Terrabacteria group	Firmicutes	2.82531	32.9	-	JIOG01	44	2953	2768	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404165	GCA_000643555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/555/GCA_000643555.1_Stap_aure_VET0317R_V1	-	VET0317R
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.96289	52.1	-	MODR01	81	5136	4823	1/18/17	3/2/17	Contig	Cornell University	SAMN04394806	GCA_001954705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/705/GCA_001954705.1_ASM195470v1	-	R8_7251_R1
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.11203	50.8	-	JUKY01	362	5341	5030	7/10/15	2/24/17	Contig	University of Washington	SAMN03198206	GCA_001059485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/485/GCA_001059485.1_ASM105948v1	26230489	985_ECOL
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.35183	65.4	-	LJIP01	298	4357	4124	9/15/15	3/11/17	Scaffold	Columbia University Mailman School of Public Health	SAMN03813785	GCA_001282535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/535/GCA_001282535.1_ASM128253v1	-	C_10367
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.18565	39.8	-	CLZA01	47	2357	2121	3/21/15	3/4/17	Scaffold	SC	SAMEA1028944	GCA_001096165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/165/GCA_001096165.1_6983_8_73	-	SMRU2377
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.15608	39.4	-	CLIH01	60	2375	2117	3/21/15	3/15/17	Scaffold	SC	SAMEA1025818	GCA_001096205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/205/GCA_001096205.1_6925_6_21	-	SMRU2205
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.43294	65.4	-	LJIR01	323	4453	4164	9/15/15	3/11/17	Scaffold	Columbia University Mailman School of Public Health	SAMN03813790	GCA_001282555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/555/GCA_001282555.1_ASM128255v1	-	C28_9904
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.95811	50.5	-	JUNB01	215	5044	4741	7/10/15	2/23/17	Contig	University of Washington	SAMN03198151	GCA_001059575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/575/GCA_001059575.1_ASM105957v1	26230489	932_ECOL
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.97042	52.1	-	MODP01	88	5142	4817	1/18/17	3/2/17	Contig	Cornell University	SAMN04394794	GCA_001954735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/735/GCA_001954735.1_ASM195473v1	-	R9_3232_R1
Staphylococcus aureus VET0318R	1422583	PRJNA228674	228674	Terrabacteria group	Firmicutes	2.84252	32.9	-	JIOF01	47	2968	2770	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404166	GCA_000643575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/575/GCA_000643575.1_Stap_aure_VET0318R_V1	-	VET0318R
Staphylococcus aureus VET0320R	1422585	PRJNA228676	228676	Terrabacteria group	Firmicutes	2.79066	32.8	-	JIOD01	53	2924	2724	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404168	GCA_000643595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/595/GCA_000643595.1_Stap_aure_VET0320R_V1	-	VET0320R
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.97209	52.1	-	MODQ01	82	5155	4833	1/18/17	3/2/17	Contig	Cornell University	SAMN04394889	GCA_001954745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/745/GCA_001954745.1_ASM195474v1	-	R9_3231_R1
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.19279	50.8	-	JUKZ01	390	5438	5117	7/10/15	2/24/17	Contig	University of Washington	SAMN03198205	GCA_001059735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/735/GCA_001059735.1_ASM105973v1	26230489	984_ECOL
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.4567	65.4	-	LJIQ01	324	4511	4214	9/15/15	3/11/17	Scaffold	Columbia University Mailman School of Public Health	SAMN03813778	GCA_001282575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/575/GCA_001282575.1_ASM128257v1	-	AH26_26663
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04085	39.6	-	CKDX01	87	2219	1991	3/21/15	3/4/17	Scaffold	SC	SAMEA1023832	GCA_001096225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/225/GCA_001096225.1_6630_1_23	-	33C
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.19523	39.4	-	CLJT01	97	2422	2173	3/21/15	3/4/17	Scaffold	SC	SAMEA1029061	GCA_001096265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/265/GCA_001096265.1_6925_8_19	-	SMRU2539
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.29211	65.3	-	CIJF01	352	4405	4074	4/21/15	3/11/17	Scaffold	SC	SAMEA1706656	GCA_001317865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/865/GCA_001317865.1_5227_8_2	-	P09501896
Escherichia coli	562	PRJNA284562	284562	Proteobacteria	Gammaproteobacteria	4.88489	50.6	-	LFJZ01	143	5084	4778	7/14/15	2/24/17	Contig	University of the Sunshine Coast	SAMN03782451	GCA_001077875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/875/GCA_001077875.1_ASM107787v1	-	KIC-2
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.90976	52.2	-	MODH01	153	5041	4799	1/18/17	3/2/17	Contig	Cornell University	SAMN04394846	GCA_001954755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/755/GCA_001954755.1_ASM195475v1	-	R8_2690_R1
Staphylococcus aureus VET0322R	1422586	PRJNA228677	228677	Terrabacteria group	Firmicutes	2.83407	32.8	-	JIOC01	47	2973	2780	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404169	GCA_000643615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/615/GCA_000643615.1_Stap_aure_VET0322R_V1	-	VET0322R
Staphylococcus aureus VET0323R	1422587	PRJNA228678	228678	Terrabacteria group	Firmicutes	2.85069	32.9	-	JIOB01	56	2983	2777	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404170	GCA_000643635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/635/GCA_000643635.1_Stap_aure_VET0323R_V1	-	VET0323R
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.89316	52.2	-	MODG01	75	5023	4808	1/18/17	3/2/17	Contig	Cornell University	SAMN04394790	GCA_001954765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/765/GCA_001954765.1_ASM195476v1	-	R8_2873_R1
Escherichia coli	562	PRJNA288351	288351	Proteobacteria	Gammaproteobacteria	5.18111	50.6	-	LFQP01	114	5356	5006	7/20/15	2/24/17	Contig	Nanjing Agricultural University	SAMN03798528	GCA_001182815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/815/GCA_001182815.1_ASM118281v1	-	DE147
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.28474	65.3	-	CGCZ01	330	4393	4038	3/15/15	3/11/17	Scaffold	SC	SAMEA1706657	GCA_001317885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/885/GCA_001317885.1_5227_7_11	-	P09501164
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.22625	39.6	-	CMJV01	48	2464	2162	3/22/15	3/6/17	Scaffold	SC	SAMEA1026063	GCA_001096325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/325/GCA_001096325.1_7038_8_34	-	SMRU2242
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.0998	39.4	-	CLDQ01	74	2347	2109	3/21/15	3/11/17	Scaffold	SC	SAMEA1026120	GCA_001096425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/425/GCA_001096425.1_6899_5_22	-	SMRU2062
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.24724	65.2	-	CGDE01	587	4486	3977	3/15/15	3/11/17	Scaffold	SC	SAMEA1706664	GCA_001317905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/905/GCA_001317905.1_5227_8_3	-	P09502221
Escherichia coli	562	PRJNA275042	275042	Proteobacteria	Gammaproteobacteria	4.55462	50.8	-	LFIN01	30	4696	4338	7/27/15	2/23/17	Contig	Yonsei University	SAMN03761397	GCA_001187545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/545/GCA_001187545.1_ASM118754v1	26531007	C41(DE3)
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.95355	52.1	-	MODF01	109	5105	4876	1/18/17	3/2/17	Contig	Cornell University	SAMN04394749	GCA_001954815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/815/GCA_001954815.1_ASM195481v1	-	R8_4007_R1
Staphylococcus aureus VET0325R	1422588	PRJNA228679	228679	Terrabacteria group	Firmicutes	2.79985	32.9	-	JIOA01	56	2929	2727	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404171	GCA_000643655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/655/GCA_000643655.1_Stap_aure_VET0325R_V1	-	VET0325R
Staphylococcus aureus VET0326R	1422589	PRJNA228680	228680	Terrabacteria group	Firmicutes	2.79269	32.8	-	JINZ01	51	2928	2733	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404172	GCA_000643675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/675/GCA_000643675.1_Stap_aure_VET0326R_V1	-	VET0326R
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.95186	52.2	-	MODB01	134	5105	4874	1/18/17	3/2/17	Contig	Cornell University	SAMN04394780	GCA_001954825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/825/GCA_001954825.1_ASM195482v1	-	R8_5045_R1
Escherichia coli	562	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.36986	50.9	-	JWSO01	22	5637	4911	12/24/14	8/11/17	Contig	US Food and Drug Administration 	SAMN03255436	GCA_001188105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/188/105/GCA_001188105.1_ASM118810v1	-	E16
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.27848	65.3	-	CIFZ01	377	4380	4038	4/21/15	3/11/17	Scaffold	SC	SAMEA1706665	GCA_001317925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/925/GCA_001317925.1_5227_5_8	-	J09700837
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.23604	39.4	-	CLYH01	95	2505	2227	3/21/15	3/11/17	Scaffold	SC	SAMEA1029128	GCA_001096445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/445/GCA_001096445.1_6983_7_49	-	SMRU2353
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.16338	39.6	-	CMMB01	51	2413	2154	3/22/15	3/11/17	Scaffold	SC	SAMEA1029186	GCA_001096465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/465/GCA_001096465.1_7054_6_7	-	SMRU3079
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.24186	65.3	-	CFLF01	317	4352	4048	3/15/15	3/11/17	Scaffold	SC	SAMEA1706670	GCA_001317945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/945/GCA_001317945.1_5227_7_3	-	O09801157
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.26675	50.3	-	LGZM01	224	5761	5264	8/3/15	2/23/17	Contig	FDA/CFSAN	SAMN03455807	GCA_001191025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/025/GCA_001191025.1_CFSAN026792_01-NGE.clc	26430026	CFSAN026792
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.94388	52.2	-	MOCZ01	109	5091	4860	1/18/17	3/2/17	Contig	Cornell University	SAMN04394890	GCA_001954835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/835/GCA_001954835.1_ASM195483v1	-	R8_8188_R1
Staphylococcus aureus VET0329R	1422590	PRJNA228681	228681	Terrabacteria group	Firmicutes	2.78203	32.9	-	JINY01	49	2905	2719	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404173	GCA_000643695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/695/GCA_000643695.1_Stap_aure_VET0329R_V1	-	VET0329R
Staphylococcus aureus VET0331R	1422591	PRJNA228682	228682	Terrabacteria group	Firmicutes	2.75504	32.8	-	JINX01	31	2858	2681	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404174	GCA_000643715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/715/GCA_000643715.1_Stap_aure_VET0331R_V1	-	VET0331R
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	5.03079	52.1	-	MOCX01	95	5204	4969	1/18/17	3/2/17	Contig	Cornell University	SAMN04394919	GCA_001954845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/845/GCA_001954845.1_ASM195484v1	-	R9_3240_R1
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.43478	50.4	-	LGZR01	303	5984	5512	8/3/15	2/24/17	Contig	FDA/CFSAN	SAMN03455836	GCA_001191035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/035/GCA_001191035.1_CFSAN026821_01-NGE.clc	26430026	CFSAN026821
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.2721	65.3	-	CGCW01	357	4378	4012	3/15/15	3/11/17	Scaffold	SC	SAMEA1706671	GCA_001317965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/965/GCA_001317965.1_5227_6_7	-	A00401371
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.17816	39.9	-	CLPG01	70	2387	2169	3/21/15	3/11/17	Scaffold	SC	SAMEA1028667	GCA_001096545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/545/GCA_001096545.1_6949_3_11	-	SMRU2459
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.1213	39.6	-	CMCU01	79	2335	2084	3/21/15	3/11/17	Scaffold	SC	SAMEA1029405	GCA_001096585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/585/GCA_001096585.1_7004_8_94	-	33B
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.27945	65.3	-	CHZP01	531	4483	4036	4/21/15	3/11/17	Scaffold	SC	SAMEA1706685	GCA_001317985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/985/GCA_001317985.1_5227_5_2	-	J09401337
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.41746	50.6	-	LGZN01	157	5790	5346	8/3/15	2/24/17	Contig	FDA/CFSAN	SAMN03455858	GCA_001191045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/045/GCA_001191045.1_CFSAN026843_01-NGE.clc	26430026	CFSAN026843
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	5.06651	52.1	-	MOCK01	112	5247	5012	1/18/17	3/2/17	Contig	Cornell University	SAMN04394766	GCA_001954895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/895/GCA_001954895.1_ASM195489v1	-	R9_3245_R1
Staphylococcus aureus VET0333R	1422593	PRJNA228684	228684	Terrabacteria group	Firmicutes	2.79623	32.8	-	JINV01	54	2914	2701	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404176	GCA_000643735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/735/GCA_000643735.1_Stap_aure_VET0333R_V1	-	VET0333R
Staphylococcus aureus VET0335R	1422594	PRJNA228685	228685	Terrabacteria group	Firmicutes	2.78794	32.8	-	JINU01	51	2904	2702	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404177	GCA_000643755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/755/GCA_000643755.1_Stap_aure_VET0335R_V1	-	VET0335R
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.98673	52.1	-	MODM01	80	5179	4858	1/18/17	3/2/17	Contig	Cornell University	SAMN04394862	GCA_001954905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/905/GCA_001954905.1_ASM195490v1	-	R9_3234_R1
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.32083	50.8	-	LGZO01	197	5642	5226	8/3/15	2/23/17	Contig	FDA/CFSAN	SAMN03455791	GCA_001191055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/055/GCA_001191055.1_CFSAN026776_02-NGE.clc	26430026	CFSAN026776
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.32948	65.4	-	CGCU01	281	4331	3957	3/15/15	3/11/17	Scaffold	SC	SAMEA1706688	GCA_001318005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/005/GCA_001318005.1_5227_6_4	-	J09900221
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99115	39.7	-	CQRJ01	40	2215	1999	3/23/15	3/11/17	Scaffold	SC	SAMEA970250	GCA_001096625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/625/GCA_001096625.1_5159_8_10	-	BHN654
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.17036	39.6	-	CKOP01	61	2334	2085	3/21/15	3/11/17	Scaffold	SC	SAMEA1024138	GCA_001096725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/725/GCA_001096725.1_6673_8_21	-	SMRU261
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.2717	65.3	-	CHZT01	396	4387	4023	4/21/15	3/11/17	Scaffold	SC	SAMEA1706694	GCA_001318025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/025/GCA_001318025.1_5227_6_6	-	J09902073
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.37114	50.6	-	LGZQ01	243	5853	5425	8/3/15	2/24/17	Contig	FDA/CFSAN	SAMN03455834	GCA_001191105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/105/GCA_001191105.1_CFSAN026819_01-NGE.clc	26430026	CFSAN026819
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	5.02308	51.8	-	MODN01	74	5218	4896	1/18/17	3/2/17	Contig	Cornell University	SAMN04394902	GCA_001954925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/925/GCA_001954925.1_ASM195492v1	-	R9_3233_R1
Staphylococcus aureus VET0336R	1422595	PRJNA228686	228686	Terrabacteria group	Firmicutes	2.77142	32.8	-	JINT01	27	2888	2704	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404178	GCA_000643775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/775/GCA_000643775.1_Stap_aure_VET0336R_V1	-	VET0336R
Staphylococcus aureus VET0337R	1422596	PRJNA228687	228687	Terrabacteria group	Firmicutes	2.74956	32.8	-	JINS01	32	2846	2659	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404179	GCA_000643795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/795/GCA_000643795.1_Stap_aure_VET0337R_V1	-	VET0337R
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.97952	52.1	-	MODO01	75	5154	4842	1/18/17	3/2/17	Contig	Cornell University	SAMN04394793	GCA_001954935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/935/GCA_001954935.1_ASM195493v1	-	R9_3239_R1
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.23561	50.5	-	LGZD01	193	5543	5084	8/3/15	2/24/17	Contig	FDA/CFSAN	SAMN03455819	GCA_001191125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/125/GCA_001191125.1_CFSAN026804_01-NGE.clc	26430026	CFSAN026804
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.30593	65.4	-	CGDC01	250	4349	4076	3/15/15	3/11/17	Scaffold	SC	SAMEA1706695	GCA_001318045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/045/GCA_001318045.1_5227_8_10	-	Q09900131
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.12329	39.6	-	CKRP01	41	2350	2081	3/21/15	3/11/17	Scaffold	SC	SAMEA1023917	GCA_001096805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/805/GCA_001096805.1_6680_8_12	-	SMRU204
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.19849	39.6	-	CKUD01	66	2452	2185	3/21/15	3/11/17	Scaffold	SC	SAMEA1025884	GCA_001096825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/825/GCA_001096825.1_6823_2_16	-	SMRU1888
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.29116	65.3	-	CHEC01	280	4346	4057	4/21/15	3/11/17	Scaffold	SC	SAMEA1706702	GCA_001318085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/085/GCA_001318085.1_5227_7_10	-	P09501076
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.02628	50.7	-	LGZF01	117	5280	4933	8/3/15	2/24/17	Contig	FDA/CFSAN	SAMN03455808	GCA_001191135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/135/GCA_001191135.1_CFSAN026793_01-NGE.clc	26430026	CFSAN026793
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.96212	52.1	-	MODL01	80	5145	4822	1/18/17	3/2/17	Contig	Cornell University	SAMN04394920	GCA_001954975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/975/GCA_001954975.1_ASM195497v1	-	R9_3235_R1
Staphylococcus aureus VET0338R	1422597	PRJNA228688	228688	Terrabacteria group	Firmicutes	2.75763	32.8	-	JINR01	37	2839	2656	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404180	GCA_000643815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/815/GCA_000643815.1_Stap_aure_VET0338R_V1	-	VET0338R
Staphylococcus aureus VET0339R	1422598	PRJNA228689	228689	Terrabacteria group	Firmicutes	2.87269	32.8	-	JINQ01	49	3021	2821	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404181	GCA_000643835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/835/GCA_000643835.1_Stap_aure_VET0339R_V1	-	VET0339R
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.9704	52.1	-	MODK01	73	5153	4818	1/18/17	3/2/17	Contig	Cornell University	SAMN04394802	GCA_001954985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/985/GCA_001954985.1_ASM195498v1	-	R9_3250_R1
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.23917	50.5	-	LGZE01	189	5556	5082	8/3/15	2/24/17	Contig	FDA/CFSAN	SAMN03455862	GCA_001191185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/185/GCA_001191185.1_CFSAN026847_01-NGE.clc	26430026	CFSAN026847
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.29375	65.3	-	CGGP01	341	4429	4051	3/15/15	3/11/17	Scaffold	SC	SAMEA968075	GCA_001318105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/105/GCA_001318105.1_5237_5_8	-	I00300818
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.05293	39.6	-	CMUM01	136	2224	1983	3/23/15	3/11/17	Scaffold	SC	SAMEA1022922	GCA_001096845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/845/GCA_001096845.1_5737_7_1	-	157
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.05401	39.7	-	CMUF01	101	2195	1973	3/22/15	3/11/17	Scaffold	SC	SAMEA1022889	GCA_001096925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/925/GCA_001096925.1_5737_6_3	-	143
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.09418	64.9	-	CGCY01	1138	4526	3726	3/15/15	3/11/17	Scaffold	SC	SAMEA968084	GCA_001318125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/125/GCA_001318125.1_4948_5_4	-	A09901284
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.42786	50.4	-	LGZI01	237	5811	5326	8/3/15	2/24/17	Contig	FDA/CFSAN	SAMN03455861	GCA_001191195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/195/GCA_001191195.1_CFSAN026846_01-NGE.clc	26430026	CFSAN026846
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.97696	52.1	-	MODJ01	83	5159	4824	1/18/17	3/2/17	Contig	Cornell University	SAMN04394765	GCA_001954995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/954/995/GCA_001954995.1_ASM195499v1	-	R9_3236_R1
Staphylococcus aureus VET0340R	1422599	PRJNA228690	228690	Terrabacteria group	Firmicutes	2.84775	32.8	-	JINP01	43	2981	2782	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404182	GCA_000643855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/855/GCA_000643855.1_Stap_aure_VET0340R_V1	-	VET0340R
Staphylococcus aureus VET0341R	1422600	PRJNA228691	228691	Terrabacteria group	Firmicutes	2.86913	32.9	-	JINO01	46	3006	2795	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404183	GCA_000643875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/875/GCA_000643875.1_Stap_aure_VET0341R_V1	-	VET0341R
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.94815	52.2	-	MODI01	104	5108	4874	1/18/17	3/2/17	Contig	Cornell University	SAMN04394841	GCA_001955035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/035/GCA_001955035.1_ASM195503v1	-	R8_0830_R1
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.01423	50.7	-	LGZH01	105	5207	4866	8/3/15	2/24/17	Contig	FDA/CFSAN	SAMN03455809	GCA_001191205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/205/GCA_001191205.1_CFSAN026794_01-NGE.clc	26430026	CFSAN026794
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.28122	65.3	-	CHZS01	221	4308	4044	4/21/15	3/11/17	Scaffold	SC	SAMEA968088	GCA_001318145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/145/GCA_001318145.1_4948_5_6	-	A00401093
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.00797	39.6	-	CKLJ01	51	2206	2005	3/21/15	3/11/17	Scaffold	SC	SAMEA1024174	GCA_001097105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/105/GCA_001097105.1_6641_6_18	-	35F
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.22345	39.6	-	CLTC01	62	2436	2169	3/21/15	3/11/17	Scaffold	SC	SAMEA1029038	GCA_001097205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/205/GCA_001097205.1_6972_4_5	-	SMRU2597
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.27972	65.3	-	CHKJ01	350	4424	4044	4/21/15	3/11/17	Scaffold	SC	SAMEA968105	GCA_001318465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/465/GCA_001318465.1_5477_7_4	-	Q09802318
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.4219	50.9	-	LGZP01	155	5765	5334	8/3/15	2/24/17	Contig	FDA/CFSAN	SAMN03455832	GCA_001191215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/215/GCA_001191215.1_CFSAN026817_01-NGE.clc	26430026	CFSAN026817
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.95024	52.2	-	MODE01	118	4833	4685	1/18/17	1/18/17	Contig	Cornell University	SAMN04394866	GCA_001955055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/055/GCA_001955055.1_ASM195505v1	-	R8_4108_R1
Staphylococcus aureus VET0352R	1422603	PRJNA228694	228694	Terrabacteria group	Firmicutes	2.80909	32.9	-	JINL01	36	2906	2714	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404186	GCA_000643895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/895/GCA_000643895.1_Stap_aure_VET0352R_V1	-	VET0352R
Staphylococcus aureus VET0354R	1422605	PRJNA228696	228696	Terrabacteria group	Firmicutes	2.82256	32.8	-	JINJ01	37	2964	2771	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404188	GCA_000643915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/915/GCA_000643915.1_Stap_aure_VET0354R_V1	-	VET0354R
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.9494	52.2	-	MODC01	99	5108	4868	1/18/17	3/2/17	Contig	Cornell University	SAMN04394812	GCA_001955065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/065/GCA_001955065.1_ASM195506v1	-	R8_4821_R1
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.01396	50.8	-	LGZJ01	108	5238	4894	8/3/15	2/24/17	Contig	FDA/CFSAN	SAMN03455801	GCA_001191275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/275/GCA_001191275.1_CFSAN026786_02-NGE.clc	26430026	CFSAN026786
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.27135	65.3	-	CHZX01	342	4402	4021	4/21/15	3/11/17	Scaffold	SC	SAMEA968111	GCA_001318485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/485/GCA_001318485.1_5477_8_3	-	U09801187
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.05185	39.7	-	CMIU01	61	2238	1984	3/22/15	3/11/17	Scaffold	SC	SAMEA1029238	GCA_001097225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/225/GCA_001097225.1_7038_7_18	-	SMRU3018
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.01974	39.7	-	CMNC01	46	2206	2002	3/23/15	3/11/17	Scaffold	SC	SAMEA1029229	GCA_001097245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/245/GCA_001097245.1_7092_6_2	-	SMRU3098
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.27212	65.3	-	CFLG01	375	4407	4014	3/15/15	3/11/17	Scaffold	SC	SAMEA968112	GCA_001318505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/505/GCA_001318505.1_5477_8_2	-	S00600143
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.25472	50.7	-	LGZV01	215	5601	5213	8/3/15	2/24/17	Contig	FDA/CFSAN	SAMN03455848	GCA_001191295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/295/GCA_001191295.1_CFSAN026833_01-NGE.clc	-	CFSAN026833
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.94944	52.2	-	MODD01	98	5104	4871	1/18/17	3/2/17	Contig	Cornell University	SAMN04394899	GCA_001955075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/075/GCA_001955075.1_ASM195507v1	-	R8_4157_R1
Staphylococcus aureus VET0357R	1422606	PRJNA228697	228697	Terrabacteria group	Firmicutes	2.77542	32.8	-	JINI01	39	2869	2690	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404189	GCA_000643935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/935/GCA_000643935.1_Stap_aure_VET0357R_V1	-	VET0357R
Staphylococcus aureus VET0359R	1422608	PRJNA228699	228699	Terrabacteria group	Firmicutes	2.75718	32.8	-	JING01	29	2865	2679	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404191	GCA_000643955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/955/GCA_000643955.1_Stap_aure_VET0359R_V1	-	VET0359R
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.95071	52.2	-	MODA01	96	5099	4870	1/18/17	3/2/17	Contig	Cornell University	SAMN04394865	GCA_001955105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/105/GCA_001955105.1_ASM195510v1	-	R8_5931_R1
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.09802	50.7	-	LGZX01	135	5367	4984	8/3/15	2/24/17	Contig	FDA/CFSAN	SAMN03455810	GCA_001191345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/345/GCA_001191345.1_CFSAN026795_01-NGE.clc	26430026	CFSAN026795
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.29809	65.4	-	CGDK01	174	4318	4060	3/15/15	3/11/17	Scaffold	SC	SAMEA968115	GCA_001318525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/525/GCA_001318525.1_5477_7_10	-	J09701362
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14649	39.5	-	CKHI01	73	2386	2128	3/21/15	3/11/17	Scaffold	SC	SAMEA1023835	GCA_001097265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/265/GCA_001097265.1_6631_2_16	-	35C
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.08816	39.9	-	CPSX01	147	2270	2079	3/22/15	3/4/17	Scaffold	SC	SAMEA682612	GCA_001097385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/385/GCA_001097385.1_5366_8_8	-	09B01218
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.27878	65.3	-	CIAD01	335	4410	4037	4/21/15	3/11/17	Scaffold	SC	SAMEA968117	GCA_001318545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/545/GCA_001318545.1_5477_8_1	-	EE0506784
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.85094	50.7	-	LGZY01	92	5021	4743	8/3/15	2/24/17	Contig	FDA/CFSAN	SAMN03455847	GCA_001191355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/355/GCA_001191355.1_CFSAN026832_01-NGE.clc	-	CFSAN026832
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.9451	52.2	-	MOCY01	96	5104	4861	1/18/17	3/2/17	Contig	Cornell University	SAMN04394791	GCA_001955135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/135/GCA_001955135.1_ASM195513v1	-	R8_8631_R1
Staphylococcus aureus VET0360R	1422609	PRJNA228700	228700	Terrabacteria group	Firmicutes	2.80736	32.9	-	JINF01	45	2916	2726	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404192	GCA_000643975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/975/GCA_000643975.1_Stap_aure_VET0360R_V1	-	VET0360R
Staphylococcus aureus VET0363R	1422611	PRJNA228702	228702	Terrabacteria group	Firmicutes	2.81122	32.8	-	JIND01	47	2899	2717	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404194	GCA_000643995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/643/995/GCA_000643995.1_Stap_aure_VET0363R_V1	-	VET0363R
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.95854	52.2	-	MOCW01	115	5142	4889	1/18/17	3/2/17	Contig	Cornell University	SAMN04394900	GCA_001955145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/145/GCA_001955145.1_ASM195514v1	-	R9_3241_R1
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.34679	50.5	-	LGZL01	236	5807	5382	8/3/15	2/24/17	Contig	FDA/CFSAN	SAMN03455839	GCA_001191395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/395/GCA_001191395.1_CFSAN026824_01-NGE.clc	26430026	CFSAN026824
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.29717	65.3	-	CGGO01	382	4417	3984	3/15/15	3/11/17	Scaffold	SC	SAMEA968120	GCA_001318565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/565/GCA_001318565.1_5237_7_7	-	T00200958
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.17325	39.5	-	CLLG01	62	2441	2208	3/21/15	3/4/17	Scaffold	SC	SAMEA1028957	GCA_001097425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/425/GCA_001097425.1_6938_5_21	-	SMRU2661
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.1686	39.5	-	CPUQ01	312	2339	2153	3/23/15	3/4/17	Scaffold	SC	SAMEA682562	GCA_001097505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/505/GCA_001097505.1_5392_6_11	-	spnIC195
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.2939	65.4	-	CFLH01	279	4339	4055	3/15/15	3/11/17	Scaffold	SC	SAMEA968121	GCA_001318585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/585/GCA_001318585.1_5237_7_10	-	U09801472
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.17577	50.5	-	LGZK01	207	5560	5135	8/3/15	2/24/17	Contig	FDA/CFSAN	SAMN03455813	GCA_001191425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/425/GCA_001191425.1_CFSAN026798_01-NGE.clc	26430026	CFSAN026798
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.97094	52.1	-	MOCV01	97	5135	4902	1/18/17	3/2/17	Contig	Cornell University	SAMN04394805	GCA_001955165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/165/GCA_001955165.1_ASM195516v1	-	R9_3242_R1
Staphylococcus aureus VET0366R	1422613	PRJNA228705	228705	Terrabacteria group	Firmicutes	2.78334	32.8	-	JINC01	45	2896	2703	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404196	GCA_000644015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/015/GCA_000644015.1_Stap_aure_VET0366R_V1	-	VET0366R
Staphylococcus aureus VET0367R	1422614	PRJNA228706	228706	Terrabacteria group	Firmicutes	2.78575	32.8	-	JINB01	48	2892	2695	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404197	GCA_000644035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/035/GCA_000644035.1_Stap_aure_VET0367R_V1	-	VET0367R
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.88631	52	-	MOCU01	103	5000	4780	1/18/17	3/2/17	Contig	Cornell University	SAMN04394826	GCA_001955195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/195/GCA_001955195.1_ASM195519v1	-	R8_0865_R1
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.41634	50.4	-	LGZU01	290	5987	5488	8/3/15	2/24/17	Contig	FDA/CFSAN	SAMN03455835	GCA_001191435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/435/GCA_001191435.1_CFSAN026820_01-NGE.clc	26430026	CFSAN026820
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.31035	65.4	-	CIKL01	176	4331	4064	4/21/15	3/11/17	Scaffold	SC	SAMEA968125	GCA_001318605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/605/GCA_001318605.1_5505_8_5	-	N00501741
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04141	39.5	-	CKAV01	81	2235	2018	3/21/15	3/4/17	Scaffold	SC	SAMEA974618	GCA_001097565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/565/GCA_001097565.1_6259_7_10	-	15B
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.05522	39.6	-	CMLY01	67	2308	2060	3/23/15	3/4/17	Scaffold	SC	SAMEA1029273	GCA_001097665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/665/GCA_001097665.1_7054_6_23	-	SMRU3095
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.27805	65.3	-	CGDF01	194	4319	4044	3/15/15	3/11/17	Scaffold	SC	SAMEA968128	GCA_001318625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/625/GCA_001318625.1_5505_8_4	-	N00501578
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.07474	50.7	-	LHAA01	185	5387	5021	8/3/15	2/24/17	Contig	FDA/CFSAN	SAMN03455846	GCA_001191455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/455/GCA_001191455.1_CFSAN026831_01-NGE.clc	26430026	CFSAN026831
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.9336	52.1	-	MOCT01	94	5077	4840	1/18/17	3/2/17	Contig	Cornell University	SAMN04394827	GCA_001955215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/215/GCA_001955215.1_ASM195521v1	-	R8_7307_R1
Staphylococcus aureus VET0369R	1422616	PRJNA228708	228708	Terrabacteria group	Firmicutes	2.80108	32.9	-	JIMZ01	60	2913	2719	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404199	GCA_000644055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/055/GCA_000644055.1_Stap_aure_VET0369R_V1	-	VET0369R
Staphylococcus aureus VET0373R	1422617	PRJNA228709	228709	Terrabacteria group	Firmicutes	2.75903	32.8	-	JIMY01	40	2876	2678	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404200	GCA_000644075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/075/GCA_000644075.1_Stap_aure_VET0373R_V1	-	VET0373R
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	5.02184	52.1	-	MOCR01	119	5223	4942	1/18/17	3/2/17	Contig	Cornell University	SAMN04394881	GCA_001955225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/225/GCA_001955225.1_ASM195522v1	-	R8_8387_R1
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.14746	50.4	-	LGZT01	199	5497	5051	8/3/15	2/24/17	Contig	FDA/CFSAN	SAMN03455815	GCA_001191505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/505/GCA_001191505.1_CFSAN026800_01-NGE.clc	26430026	CFSAN026800
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.29842	65.4	-	CIGL01	363	4406	4076	4/21/15	3/11/17	Scaffold	SC	SAMEA968140	GCA_001318665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/665/GCA_001318665.1_5319_2_11	-	N00302086
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.23131	39.4	-	CKZW01	102	2480	2208	3/21/15	3/4/17	Scaffold	SC	SAMEA1026223	GCA_001097685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/685/GCA_001097685.1_6840_3_11	-	SMRU1811
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.06444	39.7	-	CLOR01	67	2269	2050	3/21/15	3/4/17	Scaffold	SC	SAMEA1029094	GCA_001097765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/765/GCA_001097765.1_6949_2_15	-	SMRU2439
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.29686	65.3	-	CIJI01	408	4441	4075	4/21/15	3/11/17	Scaffold	SC	SAMEA968141	GCA_001318685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/685/GCA_001318685.1_5319_2_10	-	N09501026
Escherichia coli AD30	1169664	PRJEB9743	289324	Proteobacteria	Gammaproteobacteria	5.07795	50.7	-	CWHW01	117	5295	4925	7/9/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3470424	GCA_001244915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/915/GCA_001244915.1_1.ECAD30.1	-	-
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	5.02628	52.1	-	MOCS01	132	5213	4937	1/18/17	3/2/17	Contig	Cornell University	SAMN04394916	GCA_001955235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/235/GCA_001955235.1_ASM195523v1	-	R8_8274_R1
Staphylococcus aureus VET0376R	1422618	PRJNA228711	228711	Terrabacteria group	Firmicutes	2.81927	32.9	-	JIMX01	44	2950	2747	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404201	GCA_000644095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/095/GCA_000644095.1_Stap_aure_VET0376R_V1	-	VET0376R
Staphylococcus aureus VET0382R	1422619	PRJNA228712	228712	Terrabacteria group	Firmicutes	2.84481	32.9	-	JIMW01	33	2974	2790	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404202	GCA_000644115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/115/GCA_000644115.1_Stap_aure_VET0382R_V1	-	VET0382R
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	5.08476	52.2	-	MOCQ01	121	5275	5020	1/18/17	3/2/17	Contig	Cornell University	SAMN04394768	GCA_001955265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/265/GCA_001955265.1_ASM195526v1	-	R8_9118_R1
Escherichia coli	562	PRJEB9141	289226	Proteobacteria	Gammaproteobacteria	5.22413	50.6	-	CVOH01	209	5649	5008	7/7/15	2/24/17	Contig	LSHTM	SAMEA3355668	GCA_001245225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/225/GCA_001245225.1_E._coli_A192PP	-	A192PP
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.29157	65.4	-	CGDJ01	346	4386	4073	3/15/15	3/11/17	Scaffold	SC	SAMEA968143	GCA_001318705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/705/GCA_001318705.1_5319_2_8	-	N00001996
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.14839	39.5	-	CPOH01	79	2358	2141	3/23/15	3/4/17	Scaffold	SC	SAMEA1020012	GCA_001097805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/805/GCA_001097805.1_6569_4_5	-	PT3536
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11223	39.4	-	CKLX01	77	2273	2031	3/21/15	3/4/17	Scaffold	SC	SAMEA1888683	GCA_001097865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/865/GCA_001097865.1_6649_7_17	-	SMRU545
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.33328	65.5	-	CHKH01	243	4325	3994	4/21/15	3/11/17	Scaffold	SC	SAMEA968151	GCA_001318725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/725/GCA_001318725.1_6505_2_6	-	K09600911
Escherichia coli	562	PRJNA286238	286238	Proteobacteria	Gammaproteobacteria	5.22878	50.6	-	LELX01	81	5503	5157	8/6/15	2/24/17	Contig	Institut national de sante publique du Quebec	SAMN03766316	GCA_001262455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/455/GCA_001262455.1_ASM126245v1	26430054	LSPQ A134697
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.86702	52.1	-	MOCP01	117	4983	4758	1/18/17	3/2/17	Contig	Cornell University	SAMN04394863	GCA_001955295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/295/GCA_001955295.1_ASM195529v1	-	R8_9801_R1
Staphylococcus aureus VET0383R	1422620	PRJNA228713	228713	Terrabacteria group	Firmicutes	2.88206	32.9	-	JIMV01	69	3060	2846	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404203	GCA_000644135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/135/GCA_000644135.1_Stap_aure_VET0383R_V1	-	VET0383R
Staphylococcus aureus VET0384R	1422621	PRJNA228714	228714	Terrabacteria group	Firmicutes	2.78666	32.9	-	JIMU01	54	2892	2681	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404204	GCA_000644155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/155/GCA_000644155.1_Stap_aure_VET0384R_V1	-	VET0384R
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.86288	52.2	-	MOCO01	111	4980	4753	1/18/17	3/2/17	Contig	Cornell University	SAMN04394843	GCA_001955305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/305/GCA_001955305.1_ASM195530v1	-	R8_9815_R1
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.91222	50.8	-	LHCX01	178	5107	4767	8/7/15	2/24/17	Contig	FDA/CFSAN	SAMN03455790	GCA_001262775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/775/GCA_001262775.1_2089-2	26430026	CFSAN026775
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.2841	65.4	-	CGDH01	247	4347	4046	3/15/15	3/11/17	Scaffold	SC	SAMEA968152	GCA_001318745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/745/GCA_001318745.1_5477_7_1	-	EE0502463
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07838	39.6	-	CKGD01	133	2305	2050	3/21/15	3/11/17	Scaffold	SC	SAMEA1024092	GCA_001097925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/925/GCA_001097925.1_6630_4_21	-	4
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.11606	39.5	-	CPTK01	84	2313	2069	3/23/15	3/11/17	Scaffold	SC	SAMEA1020797	GCA_001098045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/045/GCA_001098045.1_6187_7_13	-	LMG3367
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.15408	65.1	-	CGDG01	930	4537	3843	3/15/15	3/11/17	Scaffold	SC	SAMEA968158	GCA_001318765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/765/GCA_001318765.1_4948_5_3	-	A00400237
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.93015	50.8	-	LHCN01	114	5162	4862	8/7/15	2/24/17	Contig	FDA/CFSAN	SAMN03455797	GCA_001262805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/805/GCA_001262805.1_15484-1	26430026	CFSAN026782
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.86758	52.1	-	MOCN01	117	4973	4748	1/18/17	3/2/17	Contig	Cornell University	SAMN04394760	GCA_001955315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/315/GCA_001955315.1_ASM195531v1	-	R8_9832_R1
Staphylococcus aureus VET0387R	1422622	PRJNA228715	228715	Terrabacteria group	Firmicutes	2.80662	32.8	-	JIMT01	54	2925	2748	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404205	GCA_000644175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/175/GCA_000644175.1_Stap_aure_VET0387R_V1	-	VET0387R
Staphylococcus aureus VET0388R	1422623	PRJNA228716	228716	Terrabacteria group	Firmicutes	2.72939	32.8	-	JIMS01	36	2804	2620	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404206	GCA_000644195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/195/GCA_000644195.1_Stap_aure_VET0388R_V1	-	VET0388R
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	5.07848	52.1	-	MOCM01	109	5279	5024	1/18/17	3/2/17	Contig	Cornell University	SAMN04394761	GCA_001955345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/345/GCA_001955345.1_ASM195534v1	-	R9_3243_R1
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.92636	50.8	-	LHCO01	52	5103	4801	8/7/15	2/24/17	Contig	FDA/CFSAN	SAMN03455812	GCA_001262865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/865/GCA_001262865.1_6842-1	26430026	CFSAN026797
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.22845	65.2	-	CGDU01	494	4430	3977	3/15/15	3/11/17	Scaffold	SC	SAMEA968173	GCA_001318825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/825/GCA_001318825.1_5237_8_6	-	N00400960
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.08128	39.7	-	CPPF01	73	2288	2081	3/22/15	3/11/17	Scaffold	SC	SAMEA682332	GCA_001098125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/125/GCA_001098125.1_5381_1_3	-	09B01718
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09303	39.5	-	CMLZ01	40	2290	2064	3/22/15	3/11/17	Scaffold	SC	SAMEA1029263	GCA_001098145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/145/GCA_001098145.1_7054_6_22	-	SMRU3094
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.25037	65.2	-	CGDL01	569	4515	3971	3/15/15	3/11/17	Scaffold	SC	SAMEA968176	GCA_001318845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/845/GCA_001318845.1_5237_8_9	-	M09400374
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.05562	50.7	-	LHCR01	128	5356	4982	8/7/15	2/24/17	Contig	FDA/CFSAN	SAMN03455822	GCA_001262895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/895/GCA_001262895.1_9916-1	26430026	CFSAN026807
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.98844	52.2	-	MOCL01	117	5169	4916	1/18/17	3/2/17	Contig	Cornell University	SAMN04394815	GCA_001955375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/375/GCA_001955375.1_ASM195537v1	-	R9_3244_R1
Staphylococcus aureus VET0389R	1422624	PRJNA228717	228717	Terrabacteria group	Firmicutes	2.73541	32.8	-	JIMR01	34	2803	2624	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404207	GCA_000644215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/215/GCA_000644215.1_Stap_aure_VET0389R_V1	-	VET0389R
Staphylococcus aureus VET0390R	1422625	PRJNA228718	228718	Terrabacteria group	Firmicutes	2.80364	32.8	-	JIMQ01	57	2920	2736	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404208	GCA_000644235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/235/GCA_000644235.1_Stap_aure_VET0390R_V1	-	VET0390R
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.99374	52.2	-	MOCJ01	108	5171	4915	1/18/17	3/2/17	Contig	Cornell University	SAMN04394844	GCA_001955385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/385/GCA_001955385.1_ASM195538v1	-	R9_3246_R1
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.74545	50.6	-	LHCY01	109	4906	4578	8/7/15	2/24/17	Contig	FDA/CFSAN	SAMN03455829	GCA_001262955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/955/GCA_001262955.1_96-1156	-	CFSAN026814
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.2527	65.3	-	CIGC01	459	4438	4012	4/21/15	3/11/17	Scaffold	SC	SAMEA968178	GCA_001318865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/865/GCA_001318865.1_5237_8_11	-	N09900805
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.99472	39.8	-	CKKI01	40	2180	1959	3/21/15	3/11/17	Scaffold	SC	SAMEA1023992	GCA_001098185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/185/GCA_001098185.1_6631_6_18	-	3
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.04136	39.7	-	CMAG01	68	2237	2030	3/21/15	3/11/17	Scaffold	SC	SAMEA1028769	GCA_001098265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/265/GCA_001098265.1_7004_5_18	-	SMRU2874
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.34201	65.4	-	CIJO01	301	4360	3928	4/21/15	3/11/17	Scaffold	SC	SAMEA968198	GCA_001318945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/945/GCA_001318945.1_6505_2_8	-	K00101539
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.04889	50.5	-	LHCT01	104	5308	4949	8/7/15	2/24/17	Contig	FDA/CFSAN	SAMN03455826	GCA_001262965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/965/GCA_001262965.1_1223-4	26430026	CFSAN026811
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.96959	52.1	-	MOCI01	119	5144	4878	1/18/17	3/2/17	Contig	Cornell University	SAMN04394850	GCA_001955395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/395/GCA_001955395.1_ASM195539v1	-	R9_3247_R1
Staphylococcus aureus VET0393R	1422626	PRJNA228719	228719	Terrabacteria group	Firmicutes	2.79205	32.8	-	JIMP01	45	2902	2721	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404209	GCA_000644255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/255/GCA_000644255.1_Stap_aure_VET0393R_V1	-	VET0393R
Staphylococcus aureus VET0394R	1422627	PRJNA228720	228720	Terrabacteria group	Firmicutes	2.80618	32.9	-	JIMO01	69	2920	2742	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404210	GCA_000644275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/275/GCA_000644275.1_Stap_aure_VET0394R_V1	-	VET0394R
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	5.06506	52.1	-	MOCH01	105	5260	5003	1/18/17	3/2/17	Contig	Cornell University	SAMN04394801	GCA_001955415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/415/GCA_001955415.1_ASM195541v1	-	R9_3248_R1
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.65725	50.4	-	LHCU01	257	6295	5788	8/7/15	2/24/17	Contig	FDA/CFSAN	SAMN03455837	GCA_001262975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/975/GCA_001262975.1_10674-1	-	CFSAN026822
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.32383	65.4	-	CHKI01	267	4327	3971	4/21/15	3/11/17	Scaffold	SC	SAMEA968202	GCA_001318965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/965/GCA_001318965.1_6505_2_9	-	K00200539
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04165	39.7	-	CKGW01	39	2240	2026	3/21/15	3/11/17	Scaffold	SC	SAMEA1023681	GCA_001098285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/285/GCA_001098285.1_6631_1_5	-	15A
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.15274	39.6	-	CMFR01	69	2408	2163	3/21/15	3/11/17	Scaffold	SC	SAMEA1028879	GCA_001098305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/305/GCA_001098305.1_7011_6_3	-	SMRU2811
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.33562	65.4	-	CFIN01	301	4371	3976	3/15/15	3/11/17	Scaffold	SC	SAMEA968209	GCA_001318985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/985/GCA_001318985.1_6505_4_7	-	M00102058
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.27375	50.6	-	LHDA01	188	5685	5297	8/7/15	2/24/17	Contig	FDA/CFSAN	SAMN03455838	GCA_001263015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/015/GCA_001263015.1_23-second	-	CFSAN026823
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.97447	52.1	-	MOCG01	129	5143	4889	1/18/17	3/2/17	Contig	Cornell University	SAMN04394914	GCA_001955455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/455/GCA_001955455.1_ASM195545v1	-	R9_3249_R1
Staphylococcus aureus VET0395R	1422628	PRJNA228721	228721	Terrabacteria group	Firmicutes	2.82176	32.9	-	JIMN01	68	2950	2746	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404211	GCA_000644295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/295/GCA_000644295.1_Stap_aure_VET0395R_V1	-	VET0395R
Staphylococcus aureus VET0396R	1422629	PRJNA228722	228722	Terrabacteria group	Firmicutes	2.83941	33	-	JIMM01	39	2936	2742	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404212	GCA_000644315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/315/GCA_000644315.1_Stap_aure_VET0396R_V1	-	VET0396R
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.97446	52.1	-	MOCF01	106	5140	4884	1/18/17	3/2/17	Contig	Cornell University	SAMN04394776	GCA_001955465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/465/GCA_001955465.1_ASM195546v1	-	R9_3251_R1
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.52143	50.4	-	LHCV01	261	6105	5588	8/7/15	2/24/17	Contig	FDA/CFSAN	SAMN03455856	GCA_001263035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/035/GCA_001263035.1_14	-	CFSAN026841
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.29177	65.3	-	CHKG01	324	4371	4029	4/21/15	3/11/17	Scaffold	SC	SAMEA968210	GCA_001319005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/005/GCA_001319005.1_5237_7_11	-	V09601310
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.14752	39.7	-	CMTT01	98	2319	2016	3/23/15	3/11/17	Scaffold	SC	SAMEA1022896	GCA_001098325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/325/GCA_001098325.1_5737_3_5	-	207_63
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.05935	39.6	-	CKDV01	54	2245	1986	3/21/15	3/11/17	Scaffold	SC	SAMEA1023732	GCA_001098345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/345/GCA_001098345.1_6630_1_20	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.31806	65.3	-	CGDN01	297	4359	3910	3/15/15	3/11/17	Scaffold	SC	SAMEA968211	GCA_001319025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/025/GCA_001319025.1_6505_4_8	-	M09400397
Escherichia coli	562	PRJNA269579	269579	Proteobacteria	Gammaproteobacteria	5.34088	50.8	-	LFZH01	10	5759	5225	8/11/15	2/24/17	Contig	National Institute for Health and Welfare	SAMN03265483	GCA_001264175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/175/GCA_001264175.1_ASM126417v1	-	IH53473
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	5.05161	52.1	-	MOCE01	99	5232	4984	1/18/17	3/2/17	Contig	Cornell University	SAMN04394781	GCA_001955475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/955/475/GCA_001955475.1_ASM195547v1	-	R9_3252_R1
Staphylococcus aureus VET0399R	1422630	PRJNA228723	228723	Terrabacteria group	Firmicutes	2.8135	32.9	-	JIML01	61	2938	2733	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404213	GCA_000644335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/335/GCA_000644335.1_Stap_aure_VET0399R_V1	-	VET0399R
Staphylococcus aureus VET0401R	1422632	PRJNA228725	228725	Terrabacteria group	Firmicutes	2.81309	32.8	-	JIMJ01	47	2913	2730	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404215	GCA_000644355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/355/GCA_000644355.1_Stap_aure_VET0401R_V1	-	VET0401R
Salmonella enterica subsp. enterica serovar Infantis str. CVM N13139	1439831	PRJNA231478	231478	Proteobacteria	Gammaproteobacteria	4.72663	52.1	-	AZYS01	63	4830	4588	1/25/17	3/2/17	Contig	FDA	SAMN02442743	GCA_001970895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/970/895/GCA_001970895.1_ASM197089v1	-	CVM N13139
Escherichia coli	562	PRJNA269579	269579	Proteobacteria	Gammaproteobacteria	5.4269	50.2	-	LFZI01	43	5657	5114	8/11/15	2/24/17	Contig	National Institute for Health and Welfare	SAMN03265485	GCA_001264195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/195/GCA_001264195.1_ASM126419v1	-	FE95160
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.26369	65.3	-	CHEB01	415	4413	4032	4/21/15	3/11/17	Scaffold	SC	SAMEA968215	GCA_001319045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/319/045/GCA_001319045.1_4948_5_11	-	B00600458
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.01996	39.6	-	CKFT01	88	2208	1986	3/21/15	3/14/17	Scaffold	SC	SAMEA1023784	GCA_001098385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/385/GCA_001098385.1_6630_4_1	-	16F
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12878	39.6	-	CLGL01	45	2372	2134	3/21/15	3/11/17	Scaffold	SC	SAMEA1025840	GCA_001098425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/425/GCA_001098425.1_6925_4_12	-	SMRU2148
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36621	65.6	-	CFTE01	99	4287	4077	3/15/15	3/11/17	Scaffold	SC	SAMEA1015921	GCA_001321665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/665/GCA_001321665.1_6954_1_49	-	0163D
Escherichia coli	562	PRJNA269579	269579	Proteobacteria	Gammaproteobacteria	5.32226	50.8	-	LFZJ01	17	5672	5140	8/11/15	2/24/17	Contig	National Institute for Health and Welfare	SAMN03265484	GCA_001264215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/264/215/GCA_001264215.1_ASM126421v1	-	IH57218
Salmonella enterica subsp. enterica serovar Infantis str. CVM N15228	1439832	PRJNA231478	231478	Proteobacteria	Gammaproteobacteria	4.73911	52.1	-	AZYT01	80	4881	4618	1/25/17	3/2/17	Contig	FDA	SAMN02442744	GCA_001970965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/970/965/GCA_001970965.1_ASM197096v1	-	CVM N15228
Staphylococcus aureus VET0402R	1422633	PRJNA228726	228726	Terrabacteria group	Firmicutes	2.76846	32.8	-	JIMI01	44	2884	2687	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404216	GCA_000644375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/375/GCA_000644375.1_Stap_aure_VET0402R_V1	-	VET0402R
Staphylococcus aureus VET0403R	1422634	PRJNA228727	228727	Terrabacteria group	Firmicutes	2.79908	32.8	-	JIMH01	48	2932	2725	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404217	GCA_000644395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/395/GCA_000644395.1_Stap_aure_VET0403R_V1	-	VET0403R
Salmonella enterica subsp. enterica serovar Infantis str. CVM N31594	1439840	PRJNA231478	231478	Proteobacteria	Gammaproteobacteria	4.71098	52.2	-	JAAX01	73	4812	4548	1/25/17	3/2/17	Contig	FDA	SAMN02442755	GCA_001970985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/970/985/GCA_001970985.1_CLC_Genomic_Workbench	-	CVM N31594
Escherichia coli	562	PRJNA237861	237861	Proteobacteria	Gammaproteobacteria	5.30685	50.4	-	JHQX01	116	5678	5234	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640691	GCA_001265155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/155/GCA_001265155.1_100414	-	100414
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35485	65.6	-	CFMQ01	72	4268	4070	3/15/15	3/11/17	Scaffold	SC	SAMEA1015923	GCA_001321685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/685/GCA_001321685.1_6972_6_21	-	type strain: 0384
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.02292	39.7	-	CMGH01	39	2234	2000	3/21/15	3/11/17	Scaffold	SC	SAMEA1029364	GCA_001098505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/505/GCA_001098505.1_7038_4_10	-	SMRU2938
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09411	39.7	-	CRHW01	51	2304	2086	3/23/15	3/11/17	Scaffold	SC	SAMEA1025253	GCA_001098545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/545/GCA_001098545.1_6736_8_15	-	SMRU1311
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36289	65.6	-	CFSQ01	88	4270	4095	3/15/15	3/11/17	Scaffold	SC	SAMEA1015927	GCA_001321705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/705/GCA_001321705.1_6954_7_11	-	0958S
Escherichia coli	562	PRJNA237859	237859	Proteobacteria	Gammaproteobacteria	5.42408	50.3	-	JHQV01	115	5861	5398	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640689	GCA_001265165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/165/GCA_001265165.1_ASM126516v1	-	100290
Salmonella enterica subsp. enterica serovar Infantis str. CVM N35518	1439847	PRJNA231478	231478	Proteobacteria	Gammaproteobacteria	4.68169	52.2	-	JABE01	62	4763	4511	1/25/17	3/2/17	Contig	FDA	SAMN02442762	GCA_001971055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/055/GCA_001971055.1_CLC_Genomic_Workbench	-	CVM N35518
Staphylococcus aureus VET0406R	1422635	PRJNA228728	228728	Terrabacteria group	Firmicutes	2.82983	32.9	-	JIMG01	44	2954	2763	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404218	GCA_000644415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/415/GCA_000644415.1_Stap_aure_VET0406R_V1	-	VET0406R
Staphylococcus aureus VET0407R	1422636	PRJNA228729	228729	Terrabacteria group	Firmicutes	2.80064	32.9	-	JIMF01	42	2932	2742	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404219	GCA_000644435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/435/GCA_000644435.1_Stap_aure_VET0407R_V1	-	VET0407R
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74647	52.1	-	MTTE01	27	4867	4615	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414469	GCA_001972545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/545/GCA_001972545.1_ASM197254v1	-	CFSAN051890
Escherichia coli	562	PRJNA237860	237860	Proteobacteria	Gammaproteobacteria	5.06788	50.6	-	JHQW01	154	5442	5044	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640690	GCA_001265175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/175/GCA_001265175.1_100343	-	100343
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36247	65.6	-	CFMN01	109	4282	4073	3/15/15	3/11/17	Scaffold	SC	SAMEA1015932	GCA_001321725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/725/GCA_001321725.1_6954_8_69	-	0348E
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.02097	39.7	-	CPQF01	117	2201	2005	3/23/15	3/11/17	Scaffold	SC	SAMEA682421	GCA_001098585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/585/GCA_001098585.1_5366_3_12	-	08B05402
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.13938	39.5	-	CMBR01	66	2360	2143	3/21/15	3/11/17	Scaffold	SC	SAMEA1029241	GCA_001098725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/725/GCA_001098725.1_7004_7_56	-	SMRU2888
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35797	65.6	-	CHCA01	89	4259	4082	4/21/15	3/11/17	Scaffold	SC	SAMEA1015937	GCA_001321765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/765/GCA_001321765.1_6954_8_56	-	1193Y
Escherichia coli	562	PRJNA237862	237862	Proteobacteria	Gammaproteobacteria	5.17243	50.5	-	JHQY01	209	5635	5133	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640692	GCA_001265185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/185/GCA_001265185.1_102550	-	102550
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.7534	52	-	MTTF01	39	4871	4615	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414468	GCA_001972555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/555/GCA_001972555.1_ASM197255v1	-	CFSAN051889
Staphylococcus aureus VET0410R	1422637	PRJNA228730	228730	Terrabacteria group	Firmicutes	2.76903	32.8	-	JIME01	33	2897	2707	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404220	GCA_000644455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/455/GCA_000644455.1_Stap_aure_VET0410R_V1	-	VET0410R
Staphylococcus aureus VET0411R	1422638	PRJNA228731	228731	Terrabacteria group	Firmicutes	2.83641	32.8	-	JIMD01	43	2971	2779	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404221	GCA_000644475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/475/GCA_000644475.1_Stap_aure_VET0411R_V1	-	VET0411R
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74667	52	-	MTTK01	31	4865	4606	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414463	GCA_001972565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/565/GCA_001972565.1_ASM197256v1	-	CFSAN051884
Escherichia coli 103385	1450430	PRJNA237863	237863	Proteobacteria	Gammaproteobacteria	5.05277	50.4	-	JHQZ01	149	5478	5066	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640693	GCA_001265235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/235/GCA_001265235.1_103385	-	103385
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36315	65.6	-	CFSV01	110	4295	4081	3/15/15	3/11/17	Scaffold	SC	SAMEA1015943	GCA_001321785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/785/GCA_001321785.1_6954_7_48	-	0911R
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1066	39.5	-	CLEU01	75	2322	2097	3/21/15	3/11/17	Scaffold	SC	SAMEA1025830	GCA_001098745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/745/GCA_001098745.1_6899_6_7	-	SMRU2071
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.21236	39.4	-	CMDX01	92	2424	2181	3/21/15	3/11/17	Scaffold	SC	SAMEA1029068	GCA_001098765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/765/GCA_001098765.1_7011_4_15	-	SMRU2775
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35025	65.6	-	CHIU01	78	4263	4082	4/21/15	3/11/17	Scaffold	SC	SAMEA1015959	GCA_001321805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/805/GCA_001321805.1_6954_8_67	-	1634C
Escherichia coli 103573	1450431	PRJNA237864	237864	Proteobacteria	Gammaproteobacteria	5.15049	50.5	-	JHRA01	134	5516	5113	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640694	GCA_001265255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/255/GCA_001265255.1_103573	-	103573
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.7977	51.9	-	MTTL01	37	4929	4675	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414462	GCA_001972575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/575/GCA_001972575.1_ASM197257v1	-	CFSAN051883
Staphylococcus aureus VET0412R	1422639	PRJNA228732	228732	Terrabacteria group	Firmicutes	2.76083	32.8	-	JIMC01	28	2874	2683	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404222	GCA_000644495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/495/GCA_000644495.1_Stap_aure_VET0412R_V1	-	VET0412R
Staphylococcus aureus VET0413R	1422640	PRJNA228733	228733	Terrabacteria group	Firmicutes	2.71357	32.9	-	JIMB01	31	2799	2612	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404223	GCA_000644515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/515/GCA_000644515.1_Stap_aure_VET0413R_V1	-	VET0413R
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74574	52	-	MTTM01	30	4860	4605	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414461	GCA_001972625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/625/GCA_001972625.1_ASM197262v1	-	CFSAN051882
Escherichia coli	562	PRJNA237865	237865	Proteobacteria	Gammaproteobacteria	5.05435	51.1	-	JHRB01	446	5417	5000	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640695	GCA_001265265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/265/GCA_001265265.1_203741	-	203741
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.357	65.6	-	CFJJ01	70	4281	4074	3/15/15	3/11/17	Scaffold	SC	SAMEA1015961	GCA_001321905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/905/GCA_001321905.1_6972_6_23	-	0406S
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.23014	39.7	-	CLMM01	49	2446	2203	3/21/15	3/11/17	Scaffold	SC	SAMEA1028852	GCA_001098825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/825/GCA_001098825.1_6938_7_15	-	SMRU2703
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.06766	39.6	-	CLKO01	61	2275	2064	3/21/15	3/4/17	Scaffold	SC	SAMEA1029291	GCA_001098845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/845/GCA_001098845.1_6938_3_25	-	SMRU3150
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36286	65.6	-	CFST01	118	4294	4079	3/15/15	3/11/17	Scaffold	SC	SAMEA1015968	GCA_001321945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/945/GCA_001321945.1_6954_7_45	-	0905K
Escherichia coli 300059	1450432	PRJNA237866	237866	Proteobacteria	Gammaproteobacteria	4.83188	50.5	-	JHRC01	122	5160	4773	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640696	GCA_001265295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/295/GCA_001265295.1_300059	-	300059
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69787	52.1	-	MTTS01	28	4814	4562	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414454	GCA_001972635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/635/GCA_001972635.1_ASM197263v1	-	CFSAN051875
Staphylococcus aureus VET0415R	1422642	PRJNA228735	228735	Terrabacteria group	Firmicutes	2.83157	32.8	-	JILZ01	56	2967	2759	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404225	GCA_000644535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/535/GCA_000644535.1_Stap_aure_VET0415R_V1	-	VET0415R
Staphylococcus aureus VET0417R	1422643	PRJNA228736	228736	Terrabacteria group	Firmicutes	2.78206	32.8	-	JILY01	35	2890	2698	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404226	GCA_000644555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/555/GCA_000644555.1_Stap_aure_VET0417R_V1	-	VET0417R
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69782	52.1	-	MTTT01	28	4814	4563	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414453	GCA_001972645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/645/GCA_001972645.1_ASM197264v1	-	CFSAN051874
Escherichia coli	562	PRJNA237867	237867	Proteobacteria	Gammaproteobacteria	4.97415	50.5	-	JHRD01	111	5365	4965	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640697	GCA_001265315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/315/GCA_001265315.1_300262	-	300262
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.33832	65.4	-	CVHR01	261	4361	4074	4/2/15	3/11/17	Scaffold	SC	SAMEA1015981	GCA_001321965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/965/GCA_001321965.1_6586_8_5	-	M9802137
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.00249	39.8	-	CKBE01	82	2221	1996	3/21/15	3/4/17	Scaffold	SC	SAMEA974652	GCA_001098885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/885/GCA_001098885.1_6259_8_14	-	1
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.0657	39.6	-	CKWT01	53	2253	2007	3/21/15	3/4/17	Scaffold	SC	SAMEA1025808	GCA_001098905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/905/GCA_001098905.1_6823_5_9	-	SMRU1953
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36884	65.6	-	CFSZ01	95	4286	4097	3/15/15	3/11/17	Scaffold	SC	SAMEA1016005	GCA_001321985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/985/GCA_001321985.1_6954_7_43	-	0847X
Escherichia coli	562	PRJNA237872	237872	Proteobacteria	Gammaproteobacteria	5.22918	50.5	-	JHRE01	527	5927	5277	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640698	GCA_001265335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/335/GCA_001265335.1_302014	-	302014
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73234	52.2	-	MTTV01	89	4825	4572	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414451	GCA_001972675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/675/GCA_001972675.1_ASM197267v1	-	CFSAN051872
Staphylococcus aureus VET0418R	1422644	PRJNA228737	228737	Terrabacteria group	Firmicutes	2.8024	32.8	-	JILX01	41	2914	2723	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404227	GCA_000644575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/575/GCA_000644575.1_Stap_aure_VET0418R_V1	-	VET0418R
Staphylococcus aureus VET0421R	1422645	PRJNA228738	228738	Terrabacteria group	Firmicutes	2.78121	32.8	-	JILW01	41	2884	2700	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404228	GCA_000644595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/595/GCA_000644595.1_Stap_aure_VET0421R_V1	-	VET0421R
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70226	52.1	-	MTTW01	32	4816	4562	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414450	GCA_001972705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/705/GCA_001972705.1_ASM197270v1	-	CFSAN051871
Escherichia coli 302053	1450433	PRJNA237878	237878	Proteobacteria	Gammaproteobacteria	4.94106	50.6	-	JHRG01	420	5487	4871	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640700	GCA_001265345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/345/GCA_001265345.1_302053	-	302053
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36292	65.6	-	CHBZ01	107	4289	4073	4/21/15	3/11/17	Scaffold	SC	SAMEA1016006	GCA_001322005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/005/GCA_001322005.1_6954_8_51	-	0951K
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04698	39.6	-	CKJR01	45	2265	2038	3/21/15	3/4/17	Scaffold	SC	SAMEA1023808	GCA_001098965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/965/GCA_001098965.1_6631_5_9	-	28F
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.1046	39.6	-	CMAH01	55	2318	2085	3/21/15	3/4/17	Scaffold	SC	SAMEA1029101	GCA_001098985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/985/GCA_001098985.1_7004_5_2	-	SMRU2858
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36595	65.6	-	CFKP01	114	4295	4085	3/15/15	3/11/17	Scaffold	SC	SAMEA1016011	GCA_001322025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/025/GCA_001322025.1_6954_1_55	-	0182Z
Escherichia coli	562	PRJNA237877	237877	Proteobacteria	Gammaproteobacteria	5.27051	50.3	-	JHRF01	436	5858	5236	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640699	GCA_001265355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/355/GCA_001265355.1_302048	-	302048
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.7391	52.1	-	MTUA01	30	4865	4613	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414446	GCA_001972715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/715/GCA_001972715.1_ASM197271v1	-	CFSAN051866
Staphylococcus aureus VET0423R	1422647	PRJNA228740	228740	Terrabacteria group	Firmicutes	2.81432	32.9	-	JILU01	49	2937	2741	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404230	GCA_000644615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/615/GCA_000644615.1_Stap_aure_VET0423R_V1	-	VET0423R
Staphylococcus aureus VET0425R	1422649	PRJNA228742	228742	Terrabacteria group	Firmicutes	2.79427	32.9	-	JILS01	56	2926	2732	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404232	GCA_000644635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/635/GCA_000644635.1_Stap_aure_VET0425R_V1	-	VET0425R
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69759	52.1	-	MTUB01	27	4811	4555	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414445	GCA_001972725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/725/GCA_001972725.1_ASM197272v1	-	CFSAN051865
Escherichia coli	562	PRJNA237880	237880	Proteobacteria	Gammaproteobacteria	5.00971	50.5	-	JHRH01	394	5562	5006	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640701	GCA_001265395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/395/GCA_001265395.1_302275	-	302275
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34894	65.6	-	CFSW01	98	4266	4081	3/15/15	3/11/17	Scaffold	SC	SAMEA1016015	GCA_001322045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/045/GCA_001322045.1_6954_8_70	-	0351H
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.07769	39.5	-	CPNY01	230	2230	2045	3/23/15	3/4/17	Scaffold	SC	SAMEA1886087	GCA_001099025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/025/GCA_001099025.1_6246_4_10	-	LMG2926
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.08325	39.7	-	CMII01	43	2273	2049	3/22/15	3/4/17	Scaffold	SC	SAMEA1029202	GCA_001099085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/085/GCA_001099085.1_7038_7_1	-	SMRU3001
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.29192	65.4	-	CVIC01	566	4517	4046	4/2/15	3/11/17	Scaffold	SC	SAMEA1016016	GCA_001322065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/065/GCA_001322065.1_6586_8_2	-	M0312712
Escherichia coli	562	PRJNA237884	237884	Proteobacteria	Gammaproteobacteria	5.03698	50.6	-	JHRL01	170	5413	4971	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640705	GCA_001265415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/415/GCA_001265415.1_401031	-	401031
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73995	52.1	-	MTUE01	31	4864	4611	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414441	GCA_001972735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/735/GCA_001972735.1_ASM197273v1	-	CFSAN051861
Staphylococcus aureus VET0427R	1422651	PRJNA228744	228744	Terrabacteria group	Firmicutes	2.81353	32.8	-	JILQ01	26	2956	2770	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404234	GCA_000644655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/655/GCA_000644655.1_Stap_aure_VET0427R_V1	-	VET0427R
Staphylococcus aureus VET0428R	1422652	PRJNA228745	228745	Terrabacteria group	Firmicutes	2.82019	32.9	-	JILP01	41	2953	2755	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404235	GCA_000644675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/675/GCA_000644675.1_Stap_aure_VET0428R_V1	-	VET0428R
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73953	52.1	-	MTUG01	36	4873	4618	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414439	GCA_001972785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/785/GCA_001972785.1_ASM197278v1	-	CFSAN051859
Escherichia coli	562	PRJNA237883	237883	Proteobacteria	Gammaproteobacteria	5.31571	50.4	-	JHRK01	170	5714	5300	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640704	GCA_001265435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/435/GCA_001265435.1_400791	-	400791
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38056	65.6	-	CFSU01	109	4299	4100	3/15/15	3/11/17	Scaffold	SC	SAMEA1016029	GCA_001322085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/085/GCA_001322085.1_6954_1_70	-	0636S
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.22364	39.4	-	CKVK01	90	2472	2220	3/21/15	3/4/17	Scaffold	SC	SAMEA1025949	GCA_001099225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/225/GCA_001099225.1_6823_4_15	-	SMRU1935
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1107	39.6	-	CMJI01	63	2300	2054	3/23/15	3/11/17	Scaffold	SC	SAMEA1026130	GCA_001099445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/445/GCA_001099445.1_7038_8_26	-	SMRU2234
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36233	65.6	-	CFSR01	106	4287	4073	3/15/15	3/11/17	Scaffold	SC	SAMEA1016033	GCA_001322105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/105/GCA_001322105.1_6954_7_14	-	0856G
Escherichia coli	562	PRJNA237881	237881	Proteobacteria	Gammaproteobacteria	5.12691	50.4	-	JHRI01	478	5775	5145	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640702	GCA_001265455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/455/GCA_001265455.1_302662	-	302662
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73895	52.1	-	MTUH01	28	4868	4615	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414438	GCA_001972795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/795/GCA_001972795.1_ASM197279v1	-	CFSAN051858
Staphylococcus aureus VET0431R	1422653	PRJNA228746	228746	Terrabacteria group	Firmicutes	2.8306	32.9	-	JILO01	51	2988	2782	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404236	GCA_000644695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/695/GCA_000644695.1_Stap_aure_VET0431R_V1	-	VET0431R
Staphylococcus aureus VET0432R	1422654	PRJNA228747	228747	Terrabacteria group	Firmicutes	2.76733	32.9	-	JILN01	34	2872	2682	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404237	GCA_000644715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/715/GCA_000644715.1_Stap_aure_VET0432R_V1	-	VET0432R
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69649	52.1	-	MTUI01	27	4808	4556	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414437	GCA_001972815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/815/GCA_001972815.1_ASM197281v1	-	CFSAN051856
Escherichia coli 401140	1450434	PRJNA237885	237885	Proteobacteria	Gammaproteobacteria	5.00187	50.8	-	JHRM01	255	5504	4986	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640706	GCA_001265465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/465/GCA_001265465.1_401140	-	401140
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35478	65.6	-	CFKQ01	55	4249	4080	3/15/15	3/11/17	Scaffold	SC	SAMEA1016047	GCA_001322165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/165/GCA_001322165.1_6972_6_10	-	0544S
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.22472	39.6	-	CPTG01	94	2474	2209	3/22/15	3/11/17	Scaffold	SC	SAMEA1408337	GCA_001099485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/485/GCA_001099485.1_7444_8_68	-	0302+20271
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10602	39.6	-	CLOH01	55	2316	2073	3/21/15	3/11/17	Scaffold	SC	SAMEA1028885	GCA_001099525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/525/GCA_001099525.1_6949_1_4	-	SMRU2404
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36355	65.6	-	CHXQ01	113	4284	4078	4/21/15	3/11/17	Scaffold	SC	SAMEA1016053	GCA_001322185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/185/GCA_001322185.1_6954_7_27	-	0817P
Escherichia coli	562	PRJNA237886	237886	Proteobacteria	Gammaproteobacteria	5.07757	50.4	-	JHRN01	142	5472	5067	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640707	GCA_001265495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/495/GCA_001265495.1_401150	-	401150
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74044	52.1	-	MTUM01	36	4879	4623	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414433	GCA_001972835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/835/GCA_001972835.1_ASM197283v1	-	CFSAN051852
Staphylococcus aureus VET0433R	1422655	PRJNA228748	228748	Terrabacteria group	Firmicutes	2.86043	32.9	-	JILM01	41	2981	2788	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404238	GCA_000644735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/735/GCA_000644735.1_Stap_aure_VET0433R_V1	-	VET0433R
Staphylococcus aureus VET0434R	1422656	PRJNA228749	228749	Terrabacteria group	Firmicutes	2.85511	32.9	-	JILL01	38	2990	2793	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404239	GCA_000644755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/755/GCA_000644755.1_Stap_aure_VET0434R_V1	-	VET0434R
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73975	52.1	-	MTUO01	30	4867	4618	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414430	GCA_001972865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/865/GCA_001972865.1_ASM197286v1	-	CFSAN051849
Escherichia coli	562	PRJNA237887	237887	Proteobacteria	Gammaproteobacteria	5.14392	50.6	-	JHRO01	228	5579	5139	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640708	GCA_001265515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/515/GCA_001265515.1_401264	-	401264
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36213	65.6	-	CHBY01	106	4293	4077	4/21/15	3/11/17	Scaffold	SC	SAMEA1016066	GCA_001322205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/205/GCA_001322205.1_6954_7_37	-	0840P
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.1293	39.6	-	CLNS01	74	2345	2099	3/21/15	3/11/17	Scaffold	SC	SAMEA1028771	GCA_001099545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/545/GCA_001099545.1_6938_8_6	-	SMRU2718
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10491	39.5	-	CLAK01	71	2304	2071	3/21/15	3/11/17	Scaffold	SC	SAMEA1025747	GCA_001099565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/565/GCA_001099565.1_6840_3_8	-	SMRU1808
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35544	65.6	-	CHXT01	76	4272	4074	4/21/15	3/11/17	Scaffold	SC	SAMEA1016068	GCA_001322225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/225/GCA_001322225.1_6972_6_43	-	0512H
Escherichia coli	562	PRJNA237888	237888	Proteobacteria	Gammaproteobacteria	5.31559	50.6	-	JHRP01	287	5862	5360	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640709	GCA_001265535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/535/GCA_001265535.1_401954	-	401954
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73921	52.1	-	MTUQ01	28	4868	4616	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414428	GCA_001972875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/875/GCA_001972875.1_ASM197287v1	-	CFSAN051847
Staphylococcus aureus VET0435R	1422657	PRJNA228750	228750	Terrabacteria group	Firmicutes	2.8584	32.8	-	JILK01	47	2998	2803	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404240	GCA_000644775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/775/GCA_000644775.1_Stap_aure_VET0435R_V1	-	VET0435R
Staphylococcus aureus VET0438R	1422660	PRJNA228753	228753	Terrabacteria group	Firmicutes	2.76835	32.8	-	JILH01	39	2859	2665	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404243	GCA_000644795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/795/GCA_000644795.1_Stap_aure_VET0438R_V1	-	VET0438R
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74719	52.1	-	MTUR01	29	4871	4621	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414427	GCA_001972905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/905/GCA_001972905.1_ASM197290v1	-	CFSAN051846
Escherichia coli 402290	1450436	PRJNA237889	237889	Proteobacteria	Gammaproteobacteria	5.3568	50.4	-	JHRQ01	109	5731	5328	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640710	GCA_001265545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/545/GCA_001265545.1_402290	-	402290
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36462	65.6	-	CFML01	113	4289	4080	3/15/15	3/11/17	Scaffold	SC	SAMEA1016074	GCA_001322245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/245/GCA_001322245.1_6954_1_59	-	0233E
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.01466	39.8	-	CPQW01	193	2164	1958	3/22/15	3/11/17	Scaffold	SC	SAMEA1020055	GCA_001099625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/625/GCA_001099625.1_6246_2_2	-	LMG137
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.04827	39.7	-	CLWW01	51	2252	2034	3/21/15	3/11/17	Scaffold	SC	SAMEA1028966	GCA_001099665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/665/GCA_001099665.1_6983_5_17	-	SMRU2321
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36461	65.6	-	CFMK01	118	4279	4070	3/15/15	3/11/17	Scaffold	SC	SAMEA1016082	GCA_001322285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/285/GCA_001322285.1_6954_1_96	-	0391B
Escherichia coli	562	PRJNA237890	237890	Proteobacteria	Gammaproteobacteria	5.00865	50.7	-	JHRR01	96	5441	5027	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640711	GCA_001265575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/575/GCA_001265575.1_702324	-	702324
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69754	52.1	-	MTUW01	27	4811	4560	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414422	GCA_001972915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/915/GCA_001972915.1_ASM197291v1	-	CFSAN051841
Staphylococcus aureus VET0439R	1422661	PRJNA228754	228754	Terrabacteria group	Firmicutes	2.75307	32.8	-	JILG01	33	2831	2657	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404244	GCA_000644815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/815/GCA_000644815.1_Stap_aure_VET0439R_V1	-	VET0439R
Staphylococcus aureus VET0440R	1422662	PRJNA228755	228755	Terrabacteria group	Firmicutes	2.81323	32.8	-	JILF01	42	2950	2761	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404245	GCA_000644835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/835/GCA_000644835.1_Stap_aure_VET0440R_V1	-	VET0440R
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69609	52.1	-	MTVA01	26	4807	4557	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414418	GCA_001972945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/945/GCA_001972945.1_ASM197294v1	-	CFSAN051837
Escherichia coli	562	PRJNA237892	237892	Proteobacteria	Gammaproteobacteria	5.30437	51.1	-	JHRS01	549	5860	5348	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640712	GCA_001265595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/595/GCA_001265595.1_703533	-	703533
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36419	65.6	-	CFSS01	91	4260	4085	3/15/15	3/11/17	Scaffold	SC	SAMEA1016088	GCA_001322305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/305/GCA_001322305.1_6954_8_60	-	1615G
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.15881	39.5	-	CLRL01	62	2381	2147	3/21/15	3/11/17	Scaffold	SC	SAMEA1028619	GCA_001099725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/725/GCA_001099725.1_6972_3_12	-	SMRU2580
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.02483	39.8	-	CPRU01	106	2162	1994	3/23/15	3/11/17	Scaffold	SC	SAMEA682274	GCA_001099805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/805/GCA_001099805.1_5381_2_10	-	09B05724
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35234	65.6	-	CIIP01	74	4270	4073	4/21/15	3/11/17	Scaffold	SC	SAMEA1016097	GCA_001322325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/325/GCA_001322325.1_6972_6_40	-	0509E
Escherichia coli 100329	1450427	PRJNA237898	237898	Proteobacteria	Gammaproteobacteria	4.81447	51.2	-	JHRT01	390	5158	4714	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640713	GCA_001265615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/615/GCA_001265615.1_100329	-	100329
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69779	52.1	-	MTUX01	28	4814	4561	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414421	GCA_001972955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/955/GCA_001972955.1_ASM197295v1	-	CFSAN051840
Staphylococcus aureus VET0442R	1422663	PRJNA228756	228756	Terrabacteria group	Firmicutes	2.76513	32.9	-	JILE01	32	2859	2679	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404246	GCA_000644855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/855/GCA_000644855.1_Stap_aure_VET0442R_V1	-	VET0442R
Staphylococcus aureus VET0443R	1422664	PRJNA228757	228757	Terrabacteria group	Firmicutes	2.78494	32.8	-	JILD01	46	2895	2690	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404247	GCA_000644875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/875/GCA_000644875.1_Stap_aure_VET0443R_V1	-	VET0443R
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70171	52.1	-	MTVD01	30	4816	4562	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414415	GCA_001972985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/985/GCA_001972985.1_ASM197298v1	-	CFSAN051834
Escherichia coli	562	PRJNA237899	237899	Proteobacteria	Gammaproteobacteria	4.68905	50.4	-	JHRU01	101	5034	4629	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640714	GCA_001265625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/625/GCA_001265625.1_100854	-	100854
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36727	65.6	-	CIKS01	110	4289	4082	4/21/15	3/11/17	Scaffold	SC	SAMEA1016109	GCA_001322385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/385/GCA_001322385.1_6954_1_95	-	0061S
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08134	39.5	-	CLBX01	74	2241	2047	3/21/15	3/11/17	Scaffold	SC	SAMEA1025942	GCA_001099845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/845/GCA_001099845.1_6871_2_14	-	SMRU1838
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08188	39.7	-	CLDV01	63	2304	2097	3/21/15	3/11/17	Scaffold	SC	SAMEA1026173	GCA_001099905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/905/GCA_001099905.1_6899_5_24	-	SMRU2064
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35588	65.6	-	CFTG01	63	4247	4076	3/15/15	3/11/17	Scaffold	SC	SAMEA1016128	GCA_001322445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/445/GCA_001322445.1_6972_6_15	-	0620A
Escherichia coli	562	PRJNA237900	237900	Proteobacteria	Gammaproteobacteria	5.29865	50.4	-	JHRV01	134	5693	5255	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640715	GCA_001265655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/655/GCA_001265655.1_102536	-	102536
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69739	52.1	-	MTVC01	27	4812	4563	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414416	GCA_001972995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/972/995/GCA_001972995.1_ASM197299v1	-	CFSAN051835
Staphylococcus aureus VET0444R	1422665	PRJNA228758	228758	Terrabacteria group	Firmicutes	2.81812	32.9	-	JILC01	40	2961	2757	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404248	GCA_000644895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/895/GCA_000644895.1_Stap_aure_VET0444R_V1	-	VET0444R
Staphylococcus aureus VET0446R	1422666	PRJNA228759	228759	Terrabacteria group	Firmicutes	2.75754	32.8	-	JILB01	25	2850	2676	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404249	GCA_000644915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/915/GCA_000644915.1_Stap_aure_VET0446R_V1	-	VET0446R
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69682	52.1	-	MTVM01	25	4810	4562	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414406	GCA_001973025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/025/GCA_001973025.1_ASM197302v1	-	CFSAN051825
Escherichia coli	562	PRJNA237901	237901	Proteobacteria	Gammaproteobacteria	5.36297	50.3	-	JHRW01	187	5847	5364	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640716	GCA_001265675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/675/GCA_001265675.1_102598	-	102598
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36663	65.6	-	CHXP01	113	4291	4075	4/21/15	3/11/17	Scaffold	SC	SAMEA1016129	GCA_001322465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/465/GCA_001322465.1_6954_1_94	-	0057N
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11656	39.6	-	CKJI01	76	2343	2112	3/21/15	3/11/17	Scaffold	SC	SAMEA1023679	GCA_001100145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/145/GCA_001100145.1_6631_5_15	-	14
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.17496	39.4	-	CLRZ01	53	2400	2178	3/21/15	3/11/17	Scaffold	SC	SAMEA1028681	GCA_001100185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/185/GCA_001100185.1_6972_3_14	-	SMRU2582
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36434	65.6	-	CIDU01	103	4288	4080	4/21/15	3/11/17	Scaffold	SC	SAMEA1016137	GCA_001322505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/505/GCA_001322505.1_6954_1_92	-	0050F
Escherichia coli	562	PRJNA237902	237902	Proteobacteria	Gammaproteobacteria	5.24079	50.5	-	JHRX01	147	5635	5167	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640717	GCA_001265685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/685/GCA_001265685.1_102929	-	102929
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69733	52.1	-	MTVN01	27	4813	4566	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414405	GCA_001973035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/035/GCA_001973035.1_ASM197303v1	-	CFSAN051824
Staphylococcus aureus VET0451R	1422667	PRJNA228760	228760	Terrabacteria group	Firmicutes	2.79954	32.9	-	JILA01	53	2924	2718	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404250	GCA_000644935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/935/GCA_000644935.1_Stap_aure_VET0451R_V1	-	VET0451R
Staphylococcus aureus VET0452R	1422668	PRJNA228761	228761	Terrabacteria group	Firmicutes	2.79732	32.8	-	JIKZ01	52	2929	2729	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404251	GCA_000644955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/955/GCA_000644955.1_Stap_aure_VET0452R_V1	-	VET0452R
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69439	52.1	-	MTVO01	25	4800	4557	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414404	GCA_001973065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/065/GCA_001973065.1_ASM197306v1	-	CFSAN051823
Escherichia coli	562	PRJNA237903	237903	Proteobacteria	Gammaproteobacteria	5.10543	50.8	-	JHRY01	376	5582	5108	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640718	GCA_001265715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/715/GCA_001265715.1_103578	-	103578
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38899	65.6	-	CGEH01	75	4285	4099	3/15/15	3/11/17	Scaffold	SC	SAMEA1016162	GCA_001322585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/585/GCA_001322585.1_6972_6_33	-	0472P
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10602	39.6	-	CLTH01	59	2312	2054	3/21/15	3/11/17	Scaffold	SC	SAMEA1029157	GCA_001100205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/205/GCA_001100205.1_6972_5_14	-	SMRU2630
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.07448	39.8	-	CPLK01	149	2212	2048	3/22/15	3/11/17	Scaffold	SC	SAMEA682539	GCA_001100265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/265/GCA_001100265.1_5429_8_9	-	09B09640
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36101	65.6	-	CFTD01	118	4297	4085	3/15/15	3/11/17	Scaffold	SC	SAMEA1016166	GCA_001322605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/605/GCA_001322605.1_6954_1_65	-	0514K
Escherichia coli	562	PRJNA237904	237904	Proteobacteria	Gammaproteobacteria	5.13209	50.6	-	JHRZ01	125	5540	5154	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640719	GCA_001265735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/735/GCA_001265735.1_200146	-	200146
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74708	52.1	-	MTTD01	28	4866	4609	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414470	GCA_001973085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/085/GCA_001973085.1_ASM197308v1	-	CFSAN051891
Staphylococcus aureus VET0454R	1422669	PRJNA228762	228762	Terrabacteria group	Firmicutes	2.78047	32.9	-	JIKY01	57	2889	2699	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404252	GCA_000644975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/975/GCA_000644975.1_Stap_aure_VET0454R_V1	-	VET0454R
Staphylococcus aureus VET0455R	1422670	PRJNA228763	228763	Terrabacteria group	Firmicutes	2.80321	32.9	-	JIKX01	42	2928	2729	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404253	GCA_000644995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/644/995/GCA_000644995.1_Stap_aure_VET0455R_V1	-	VET0455R
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74798	52.1	-	MTTG01	35	4871	4614	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414467	GCA_001973105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/105/GCA_001973105.1_ASM197310v1	-	CFSAN051888
Escherichia coli	562	PRJNA237905	237905	Proteobacteria	Gammaproteobacteria	4.96829	50.6	-	JHSA01	103	5340	4914	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640720	GCA_001265755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/755/GCA_001265755.1_300075	-	300075
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39415	65.6	-	CIDZ01	103	4311	4104	4/21/15	3/11/17	Scaffold	SC	SAMEA1016181	GCA_001322625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/625/GCA_001322625.1_6954_7_9	-	0955P
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.06325	39.7	-	CPTZ01	80	2257	2074	3/23/15	3/11/17	Scaffold	SC	SAMEA682364	GCA_001100305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/305/GCA_001100305.1_5366_7_1	-	08B10069
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.00967	39.7	-	CIMR01	90	2181	2006	3/21/15	3/4/17	Scaffold	SC	SAMEA1025052	GCA_001100385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/385/GCA_001100385.1_6731_3_6	-	SMRU1038
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36468	65.6	-	CFMM01	119	4286	4076	3/15/15	3/11/17	Scaffold	SC	SAMEA1016182	GCA_001322645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/645/GCA_001322645.1_6954_7_20	-	0943B
Escherichia coli	562	PRJNA237906	237906	Proteobacteria	Gammaproteobacteria	5.06653	50.5	-	JHSB01	104	5468	5066	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640721	GCA_001265765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/765/GCA_001265765.1_300214	-	300214
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74378	52.1	-	MTTH01	30	4862	4607	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414466	GCA_001973115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/115/GCA_001973115.1_ASM197311v1	-	CFSAN051887
Staphylococcus aureus VET0456R	1422671	PRJNA228764	228764	Terrabacteria group	Firmicutes	2.79603	32.9	-	JIKW01	45	2932	2731	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404254	GCA_000645015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/015/GCA_000645015.1_Stap_aure_VET0456R_V1	-	VET0456R
Staphylococcus aureus VET0459R	1422672	PRJNA228765	228765	Terrabacteria group	Firmicutes	2.81476	32.9	-	JIKV01	48	2921	2728	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404255	GCA_000645035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/035/GCA_000645035.1_Stap_aure_VET0459R_V1	-	VET0459R
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74584	52	-	MTTI01	37	4868	4612	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414465	GCA_001973145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/145/GCA_001973145.1_ASM197314v1	-	CFSAN051886
Escherichia coli	562	PRJNA237908	237908	Proteobacteria	Gammaproteobacteria	5.1258	50.5	-	JHSC01	79	5454	5081	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640722	GCA_001265795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/795/GCA_001265795.1_300231	-	300231
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34171	65.6	-	CFTB01	69	4235	4059	3/15/15	3/11/17	Scaffold	SC	SAMEA1016184	GCA_001322665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/665/GCA_001322665.1_6972_6_37	-	0479X
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.12582	39.7	-	CKJB01	40	2289	2011	3/21/15	3/6/17	Scaffold	SC	SAMEA1023876	GCA_001100405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/405/GCA_001100405.1_6631_4_5	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.09837	39.7	-	CPRY01	125	2330	2130	3/23/15	3/4/17	Scaffold	SC	SAMEA682391	GCA_001100445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/445/GCA_001100445.1_5366_6_4	-	08B07447
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35708	65.6	-	CIKD01	77	4271	4074	4/21/15	3/11/17	Scaffold	SC	SAMEA1016193	GCA_001322685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/685/GCA_001322685.1_6972_6_35	-	0475S
Escherichia coli	562	PRJNA237911	237911	Proteobacteria	Gammaproteobacteria	4.94326	50.8	-	JHSD01	286	5238	4824	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640723	GCA_001265815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/815/GCA_001265815.1_302150	-	302150
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74585	52	-	MTTJ01	30	4867	4614	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414464	GCA_001973165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/165/GCA_001973165.1_ASM197316v1	-	CFSAN051885
Staphylococcus aureus VET0460R	1422673	PRJNA228766	228766	Terrabacteria group	Firmicutes	2.803	32.8	-	JIKU01	44	2907	2724	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404256	GCA_000645055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/055/GCA_000645055.1_Stap_aure_VET0460R_V1	-	VET0460R
Staphylococcus aureus VET0462R	1422674	PRJNA228767	228767	Terrabacteria group	Firmicutes	2.84455	32.9	-	JIKT01	39	2993	2806	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404257	GCA_000645075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/075/GCA_000645075.1_Stap_aure_VET0462R_V1	-	VET0462R
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74638	52	-	MTTN01	32	4867	4612	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414460	GCA_001973185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/185/GCA_001973185.1_ASM197318v1	-	CFSAN051881
Escherichia coli	562	PRJNA237912	237912	Proteobacteria	Gammaproteobacteria	4.99949	51	-	JHSE01	394	5375	4967	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640724	GCA_001265835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/835/GCA_001265835.1_302687	-	302687
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3667	65.6	-	CFLS01	127	4288	4076	3/15/15	3/11/17	Scaffold	SC	SAMEA1403553	GCA_001322705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/705/GCA_001322705.1_7841_6_21	-	1825K
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.15319	39.8	-	CKXX01	72	2333	2074	3/21/15	3/15/17	Scaffold	SC	SAMEA1026153	GCA_001100525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/525/GCA_001100525.1_6823_7_16	-	SMRU2008
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.14304	39.6	-	CPLS01	83	2343	2101	3/23/15	3/4/17	Scaffold	SC	SAMEA1020409	GCA_001100545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/545/GCA_001100545.1_6187_6_18	-	LMG2050
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36744	65.6	-	CFTM01	106	4285	4079	3/15/15	3/11/17	Scaffold	SC	SAMEA1403558	GCA_001322725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/725/GCA_001322725.1_7156_7_70	-	1030W
Escherichia coli	562	PRJNA237915	237915	Proteobacteria	Gammaproteobacteria	4.7929	50.8	-	JHSF01	254	5099	4660	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640725	GCA_001265845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/845/GCA_001265845.1_302909	-	302909
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69576	52.1	-	MTTO01	28	4806	4556	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414459	GCA_001973195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/195/GCA_001973195.1_ASM197319v1	-	CFSAN051880
Staphylococcus aureus VET0463R	1422675	PRJNA228768	228768	Terrabacteria group	Firmicutes	2.84639	32.9	-	JIKS01	43	2988	2798	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404258	GCA_000645095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/095/GCA_000645095.1_Stap_aure_VET0463R_V1	-	VET0463R
Staphylococcus aureus VET0464R	1422676	PRJNA228769	228769	Terrabacteria group	Firmicutes	2.8115	32.9	-	JIKR01	54	2940	2737	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404259	GCA_000645115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/115/GCA_000645115.1_Stap_aure_VET0464R_V1	-	VET0464R
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.78498	52	-	MTTP01	99	4892	4634	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414457	GCA_001973225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/225/GCA_001973225.1_ASM197322v1	-	CFSAN051878
Escherichia coli	562	PRJNA237916	237916	Proteobacteria	Gammaproteobacteria	4.84032	50.6	-	JHSG01	102	5215	4784	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640726	GCA_001265875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/875/GCA_001265875.1_303145	-	303145
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36795	65.6	-	CFTP01	116	4288	4084	3/15/15	3/11/17	Scaffold	SC	SAMEA1403572	GCA_001322745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/745/GCA_001322745.1_7156_7_67	-	1017G
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11316	39.6	-	CKRV01	50	2347	2117	3/21/15	3/4/17	Scaffold	SC	SAMEA1023863	GCA_001100645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/645/GCA_001100645.1_6680_8_18	-	SMRU210
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.14728	39.7	-	CPPH01	127	2316	2116	3/23/15	3/4/17	Scaffold	SC	SAMEA1020641	GCA_001100665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/665/GCA_001100665.1_6569_4_11	-	DCC2613
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36674	65.6	-	CFTZ01	113	4301	4081	3/15/15	3/11/17	Scaffold	SC	SAMEA1403580	GCA_001322765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/765/GCA_001322765.1_7769_7_26	-	1353X
Escherichia coli	562	PRJNA237918	237918	Proteobacteria	Gammaproteobacteria	5.15843	50.5	-	JHSH01	102	5504	5134	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640727	GCA_001265885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/885/GCA_001265885.1_400738	-	400738
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69675	52.1	-	MTTQ01	28	4808	4560	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414456	GCA_001973245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/245/GCA_001973245.1_ASM197324v1	-	CFSAN051877
Staphylococcus aureus VET0465R	1422677	PRJNA228770	228770	Terrabacteria group	Firmicutes	2.79953	32.9	-	JIKQ01	51	2934	2729	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404260	GCA_000645135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/135/GCA_000645135.1_Stap_aure_VET0465R_V1	-	VET0465R
Staphylococcus aureus VET0468R	1422679	PRJNA228772	228772	Terrabacteria group	Firmicutes	2.78545	32.8	-	JIKO01	49	2893	2697	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404262	GCA_000645155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/155/GCA_000645155.1_Stap_aure_VET0468R_V1	-	VET0468R
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69786	52.1	-	MTTR01	27	4811	4560	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414455	GCA_001973265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/265/GCA_001973265.1_ASM197326v1	-	CFSAN051876
Escherichia coli	562	PRJNA237920	237920	Proteobacteria	Gammaproteobacteria	4.56847	52	-	JHSJ01	781	4948	4537	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640729	GCA_001265915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/915/GCA_001265915.1_401210	-	401210
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36984	65.6	-	CFUA01	91	4298	4106	3/15/15	3/11/17	Scaffold	SC	SAMEA1403582	GCA_001322785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/785/GCA_001322785.1_7755_3_67	-	0434Y
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	1.9729	39.7	-	CLER01	45	2171	1962	3/21/15	3/4/17	Scaffold	SC	SAMEA1025797	GCA_001100705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/705/GCA_001100705.1_6899_6_23	-	SMRU2087
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	1.99663	40.5	-	CPMM01	114	2157	1870	3/23/15	3/6/17	Scaffold	SC	SAMEA682370	GCA_001100725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/725/GCA_001100725.1_5366_6_6	-	08B08622
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36779	65.6	-	CFTR01	82	4277	4102	3/15/15	3/11/17	Scaffold	SC	SAMEA1403583	GCA_001322805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/805/GCA_001322805.1_7156_7_68	-	1024P
Escherichia coli	562	PRJNA237921	237921	Proteobacteria	Gammaproteobacteria	5.10291	50.5	-	JHSK01	100	5520	5111	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640730	GCA_001265925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/925/GCA_001265925.1_401588	-	401588
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74007	52.1	-	MTTX01	28	4869	4617	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414449	GCA_001973305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/305/GCA_001973305.1_ASM197330v1	-	CFSAN051870
Staphylococcus aureus VET0470R	1422681	PRJNA228774	228774	Terrabacteria group	Firmicutes	2.81	32.9	-	JIKM01	55	2912	2724	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404264	GCA_000645175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/175/GCA_000645175.1_Stap_aure_VET0470R_V1	-	VET0470R
Staphylococcus aureus VET0478R	1422685	PRJNA228778	228778	Terrabacteria group	Firmicutes	2.78349	32.9	-	JIKI01	30	2894	2710	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404268	GCA_000645195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/195/GCA_000645195.1_Stap_aure_VET0478R_V1	-	VET0478R
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73982	52.1	-	MTTY01	28	4868	4615	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414448	GCA_001973325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/325/GCA_001973325.1_ASM197332v1	-	CFSAN051868
Escherichia coli	562	PRJNA237922	237922	Proteobacteria	Gammaproteobacteria	4.8992	50.4	-	JHSL01	96	5269	4841	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640731	GCA_001265935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/935/GCA_001265935.1_401817	-	401817
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36158	65.5	-	CIEF01	159	4328	4087	4/21/15	3/11/17	Scaffold	SC	SAMEA1403587	GCA_001322825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/825/GCA_001322825.1_7841_7_61	-	1942M
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.00907	39.8	-	CRNQ01	30	2214	1965	3/23/15	3/6/17	Scaffold	SC	SAMEA1024993	GCA_001100745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/745/GCA_001100745.1_6755_4_3	-	SMRU1131
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04667	39.8	-	CKHP01	65	2298	2058	3/21/15	3/4/17	Scaffold	SC	SAMEA1024019	GCA_001100805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/805/GCA_001100805.1_6631_2_3	-	1
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39108	65.6	-	CFTT01	107	4302	4096	3/15/15	3/11/17	Scaffold	SC	SAMEA1403588	GCA_001322845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/845/GCA_001322845.1_7755_2_22	-	type strain: 0200
Escherichia coli	562	PRJNA237923	237923	Proteobacteria	Gammaproteobacteria	5.10936	50.5	-	JHSM01	94	5491	5059	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640732	GCA_001265975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/975/GCA_001265975.1_402310	-	402310
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69689	52.1	-	MTUC01	27	4804	4553	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414444	GCA_001973345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/345/GCA_001973345.1_ASM197334v1	-	CFSAN051864
Staphylococcus aureus VET0481R	1422686	PRJNA228779	228779	Terrabacteria group	Firmicutes	2.7702	32.9	-	JIKH01	56	2885	2684	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404269	GCA_000645215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/215/GCA_000645215.1_Stap_aure_VET0481R_V1	-	VET0481R
Staphylococcus aureus VET0485R	1422687	PRJNA228780	228780	Terrabacteria group	Firmicutes	2.76019	32.8	-	JIKG01	39	2877	2673	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404270	GCA_000645235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/235/GCA_000645235.1_Stap_aure_VET0485R_V1	-	VET0485R
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73986	52.1	-	MTTZ01	29	4869	4616	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414447	GCA_001973355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/355/GCA_001973355.1_ASM197335v1	-	CFSAN051867
Escherichia coli	562	PRJNA237924	237924	Proteobacteria	Gammaproteobacteria	5.47732	50.4	-	JHSN01	135	5997	5552	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640733	GCA_001265995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/265/995/GCA_001265995.1_402804	-	402804
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.40444	65.6	-	CFTO01	92	4323	4122	3/15/15	3/11/17	Scaffold	SC	SAMEA1403604	GCA_001322865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/865/GCA_001322865.1_7755_3_73	-	0498S
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09012	39.6	-	CKEC01	77	2294	2057	3/21/15	3/6/17	Scaffold	SC	SAMEA1024188	GCA_001100825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/825/GCA_001100825.1_6630_1_6	-	14
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.07885	39.5	-	CMLO01	54	2277	2049	3/23/15	3/4/17	Scaffold	SC	SAMEA1029377	GCA_001100845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/845/GCA_001100845.1_7054_6_16	-	SMRU3088
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.47086	65.6	-	CGEI01	132	4415	4170	3/15/15	3/11/17	Scaffold	SC	SAMEA1403615	GCA_001322905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/905/GCA_001322905.1_7755_3_72	-	0486E
Escherichia coli	562	PRJNA237925	237925	Proteobacteria	Gammaproteobacteria	5.4047	50.4	-	JHSO01	181	5866	5417	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640734	GCA_001266005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/005/GCA_001266005.1_702423	-	702423
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69732	52.1	-	MTUD01	30	4808	4555	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414442	GCA_001973385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/385/GCA_001973385.1_ASM197338v1	-	CFSAN051862
Staphylococcus aureus VET0486R	1422688	PRJNA228781	228781	Terrabacteria group	Firmicutes	2.76265	32.8	-	JIKF01	25	2855	2671	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404271	GCA_000645255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/255/GCA_000645255.1_Stap_aure_VET0486R_V1	-	VET0486R
Staphylococcus aureus VET0488R	1422689	PRJNA228782	228782	Terrabacteria group	Firmicutes	2.79139	32.8	-	JIKE01	48	2889	2696	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404272	GCA_000645275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/275/GCA_000645275.1_Stap_aure_VET0488R_V1	-	VET0488R
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73956	52.1	-	MTUF01	32	4868	4613	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414440	GCA_001973405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/405/GCA_001973405.1_ASM197340v1	-	CFSAN051860
Escherichia coli	562	PRJNA237927	237927	Proteobacteria	Gammaproteobacteria	5.27423	50.4	-	JHSQ01	123	5627	5162	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640736	GCA_001266015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/015/GCA_001266015.1_100100	-	100100
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39097	65.6	-	CFNG01	103	4318	4103	3/15/15	3/11/17	Scaffold	SC	SAMEA1403622	GCA_001322925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/925/GCA_001322925.1_7841_6_37	-	1867F
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.05047	39.7	-	CQZQ01	67	2265	2042	3/22/15	3/11/17	Scaffold	SC	SAMEA1024606	GCA_001100965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/965/GCA_001100965.1_6730_6_1	-	SMRU673
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.15065	39.5	-	CMMG01	71	2388	2161	3/23/15	3/11/17	Scaffold	SC	SAMEA1029208	GCA_001101045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/045/GCA_001101045.1_7054_6_8	-	SMRU3080
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36907	65.6	-	CFUH01	123	4303	4075	3/15/15	3/11/17	Scaffold	SC	SAMEA1403640	GCA_001323005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/005/GCA_001323005.1_7841_6_40	-	1870J
Escherichia coli	562	PRJNA237926	237926	Proteobacteria	Gammaproteobacteria	5.23202	50.6	-	JHSP01	237	5752	5198	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640735	GCA_001266025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/025/GCA_001266025.1_702626	-	702626
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73923	52.1	-	MTUJ01	31	4868	4622	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414436	GCA_001973425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/425/GCA_001973425.1_ASM197342v1	-	CFSAN051855
Staphylococcus aureus VET0519S	1422752	PRJNA228845	228845	Terrabacteria group	Firmicutes	2.71154	32.9	-	JIKC01	25	2816	2636	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404335	GCA_000645295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/295/GCA_000645295.1_Stap_aure_VET0519S_V1	-	VET0519S
Staphylococcus aureus VET0596R	1422691	PRJNA228784	228784	Terrabacteria group	Firmicutes	2.83721	32.9	-	JIKB01	44	2983	2790	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404274	GCA_000645315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/315/GCA_000645315.1_Stap_aure_VET0596R_V1	-	VET0596R
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.76387	52	-	MTUK01	64	4880	4626	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414435	GCA_001973435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/435/GCA_001973435.1_ASM197343v1	-	CFSAN051854
Escherichia coli	562	PRJNA237932	237932	Proteobacteria	Gammaproteobacteria	4.85021	50.6	-	JHSR01	89	5149	4811	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640737	GCA_001266075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/075/GCA_001266075.1_100175	-	100175
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36628	65.6	-	CHXV01	114	4297	4079	4/21/15	3/11/17	Scaffold	SC	SAMEA1403644	GCA_001323045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/045/GCA_001323045.1_7755_5_58	-	0824X
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.08042	39.5	-	CKFS01	170	2332	2067	3/21/15	3/14/17	Scaffold	SC	SAMEA1024127	GCA_001101065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/065/GCA_001101065.1_6630_4_10	-	10B
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.1763	39.5	-	CKJW01	67	2388	2123	3/21/15	3/11/17	Scaffold	SC	SAMEA1023822	GCA_001101105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/105/GCA_001101105.1_6631_6_10	-	5
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39061	65.6	-	CFMS01	92	4292	4096	3/15/15	3/11/17	Scaffold	SC	SAMEA1403652	GCA_001323065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/065/GCA_001323065.1_7755_5_59	-	0825Y
Escherichia coli	562	PRJNA237929	237929	Proteobacteria	Gammaproteobacteria	5.27971	50.3	-	JHSS01	110	5631	5150	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640738	GCA_001266095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/095/GCA_001266095.1_102132	-	102132
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74032	52.1	-	MTUL01	35	4873	4609	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414434	GCA_001973465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/465/GCA_001973465.1_ASM197346v1	-	CFSAN051853
Staphylococcus aureus VET0632S	1422754	PRJNA228847	228847	Terrabacteria group	Firmicutes	2.75315	32.7	-	JIJZ01	53	2908	2719	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404337	GCA_000645335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/335/GCA_000645335.1_Stap_aure_VET0632S_V1	-	VET0632S
Staphylococcus aureus VET0645S	1422755	PRJNA228848	228848	Terrabacteria group	Firmicutes	2.75334	32.9	-	JIJY01	39	2877	2695	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404338	GCA_000645355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/355/GCA_000645355.1_Stap_aure_VET0645S_V1	-	VET0645S
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73996	52.1	-	MTUN01	31	4865	4618	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414432	GCA_001973475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/475/GCA_001973475.1_ASM197347v1	-	CFSAN051851
Escherichia coli	562	PRJNA237928	237928	Proteobacteria	Gammaproteobacteria	4.78544	50.6	-	JHST01	97	5139	4739	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640739	GCA_001266115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/115/GCA_001266115.1_102535	-	102535
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36365	65.6	-	CFUP01	132	4296	4073	3/15/15	3/11/17	Scaffold	SC	SAMEA1403665	GCA_001323125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/125/GCA_001323125.1_7841_6_20	-	1824J
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.08364	39.7	-	CPRF01	90	2285	2089	3/22/15	3/11/17	Scaffold	SC	SAMEA769959	GCA_001101185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/185/GCA_001101185.1_5242_3_6	-	18B/2
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08887	39.7	-	CLAL01	39	2287	2034	3/21/15	3/11/17	Scaffold	SC	SAMEA1025484	GCA_001101325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/325/GCA_001101325.1_6841_7_15	-	SMRU1335
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36469	65.6	-	CFUJ01	104	4277	4090	3/15/15	3/11/17	Scaffold	SC	SAMEA1403671	GCA_001323145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/145/GCA_001323145.1_7769_8_68	-	1691P
Escherichia coli	562	PRJNA237933	237933	Proteobacteria	Gammaproteobacteria	4.65581	50.5	-	JHSU01	112	5052	4615	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640740	GCA_001266125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/125/GCA_001266125.1_103338	-	103338
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73989	52.1	-	MTUS01	32	4867	4608	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414426	GCA_001973505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/505/GCA_001973505.1_ASM197350v1	-	CFSAN051845
Staphylococcus aureus VET0657S	1422756	PRJNA228849	228849	Terrabacteria group	Firmicutes	2.773	32.9	-	JIJX01	28	2889	2710	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404339	GCA_000645375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/375/GCA_000645375.1_Stap_aure_VET0657S_V1	-	VET0657S
Staphylococcus aureus VET0678S	1422757	PRJNA228850	228850	Terrabacteria group	Firmicutes	2.74824	32.7	-	JIJW01	39	2890	2720	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404340	GCA_000645395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/395/GCA_000645395.1_Stap_aure_VET0678S_V1	-	VET0678S
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.71495	52.1	-	MTUP01	51	4813	4563	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414429	GCA_001973515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/515/GCA_001973515.1_ASM197351v1	-	CFSAN051848
Escherichia coli	562	PRJNA237934	237934	Proteobacteria	Gammaproteobacteria	5.0857	50.6	-	JHSV01	182	5515	5005	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640741	GCA_001266155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/155/GCA_001266155.1_103447	-	103447
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36917	65.6	-	CGEK01	115	4298	4075	3/15/15	3/11/17	Scaffold	SC	SAMEA1403676	GCA_001323165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/165/GCA_001323165.1_7755_3_89	-	0570W
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05955	39.7	-	CLMI01	49	2238	1996	3/21/15	3/11/17	Scaffold	SC	SAMEA1028904	GCA_001101405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/405/GCA_001101405.1_6938_7_21	-	SMRU2709
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.05784	39.5	-	CRFA01	82	2263	2037	3/23/15	3/11/17	Scaffold	SC	SAMEA1024855	GCA_001101465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/465/GCA_001101465.1_6731_6_8	-	SMRU1112
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39873	65.6	-	CFKR01	103	4316	4115	3/15/15	3/11/17	Scaffold	SC	SAMEA1403686	GCA_001323185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/185/GCA_001323185.1_7755_2_37	-	0278D
Escherichia coli	562	PRJNA237935	237935	Proteobacteria	Gammaproteobacteria	5.08589	50.5	-	JHSW01	141	5480	4979	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640742	GCA_001266175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/175/GCA_001266175.1_200077	-	200077
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74731	52.1	-	MTUT01	32	4876	4619	1/26/17	4/29/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414425	GCA_001973545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/545/GCA_001973545.1_ASM197354v1	-	CFSAN051844
Staphylococcus aureus VET0679S	1422758	PRJNA228851	228851	Terrabacteria group	Firmicutes	2.71671	32.7	-	JIJV01	42	2840	2659	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404341	GCA_000645415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/415/GCA_000645415.1_Stap_aure_VET0679S_V1	-	VET0679S
Staphylococcus aureus VET0779S	1422760	PRJNA228853	228853	Terrabacteria group	Firmicutes	2.69337	32.9	-	JIJT01	26	2793	2592	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404343	GCA_000645435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/435/GCA_000645435.1_Stap_aure_VET0779S_V1	-	VET0779S
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73894	52.1	-	MTUU01	29	4869	4621	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414424	GCA_001973565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/565/GCA_001973565.1_ASM197356v1	-	CFSAN051843
Escherichia coli	562	PRJNA237936	237936	Proteobacteria	Gammaproteobacteria	4.51131	50.6	-	JHSX01	64	4821	4455	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640743	GCA_001266195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/195/GCA_001266195.1_300469	-	300469
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3707	65.6	-	CFTJ01	102	4293	4078	3/15/15	3/11/17	Scaffold	SC	SAMEA1403689	GCA_001323205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/205/GCA_001323205.1_7314_8_81	-	1509R
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10278	39.7	-	CKTF01	85	2329	2091	3/21/15	3/11/17	Scaffold	SC	SAMEA1025546	GCA_001101665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/665/GCA_001101665.1_6807_3_15	-	SMRU1623
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.02301	39.7	-	CMGF01	52	2206	1999	3/21/15	3/11/17	Scaffold	SC	SAMEA1029415	GCA_001101705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/705/GCA_001101705.1_7038_4_17	-	SMRU2945
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38076	65.6	-	CFTW01	100	4313	4114	3/15/15	3/11/17	Scaffold	SC	SAMEA1403709	GCA_001323225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/225/GCA_001323225.1_7755_2_39	-	0281G
Escherichia coli	562	PRJNA237937	237937	Proteobacteria	Gammaproteobacteria	4.85164	51.2	-	JHSY01	385	5234	4793	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640744	GCA_001266215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/215/GCA_001266215.1_300847	-	300847
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69792	52.1	-	MTUY01	28	4812	4558	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414420	GCA_001973585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/585/GCA_001973585.1_ASM197358v1	-	CFSAN051839
Staphylococcus aureus VET0787S	1422761	PRJNA228854	228854	Terrabacteria group	Firmicutes	2.77325	33	-	JIJS01	36	2889	2698	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404344	GCA_000645455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/455/GCA_000645455.1_Stap_aure_VET0787S_V1	-	VET0787S
Staphylococcus aureus VET0809S	1422763	PRJNA228856	228856	Terrabacteria group	Firmicutes	2.75203	32.9	-	JIJQ01	43	2875	2685	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404346	GCA_000645475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/475/GCA_000645475.1_Stap_aure_VET0809S_V1	-	VET0809S
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69757	52.1	-	MTUV01	28	4812	4563	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414423	GCA_001973595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/595/GCA_001973595.1_ASM197359v1	-	CFSAN051842
Escherichia coli	562	PRJNA237938	237938	Proteobacteria	Gammaproteobacteria	5.1013	50.5	-	JHSZ01	44	5274	4938	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640745	GCA_001266225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/225/GCA_001266225.1_302137	-	302137
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37927	65.6	-	CFNB01	101	4293	4095	3/15/15	3/11/17	Scaffold	SC	SAMEA1403725	GCA_001323285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/285/GCA_001323285.1_7841_6_28	-	1849L
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.16936	39.6	-	CKZI01	59	2389	2174	3/21/15	3/11/17	Scaffold	SC	SAMEA1026199	GCA_001101745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/745/GCA_001101745.1_6840_1_17	-	SMRU1769
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.20388	39.6	-	CPMD01	103	2445	2199	3/23/15	3/11/17	Scaffold	SC	SAMEA1408264	GCA_001101845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/845/GCA_001101845.1_7444_8_61	-	0206+21189
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37737	65.6	-	CFIC01	99	4309	4113	3/15/15	3/11/17	Scaffold	SC	SAMEA1403735	GCA_001323325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/325/GCA_001323325.1_7755_3_84	-	0533F
Escherichia coli	562	PRJNA237939	237939	Proteobacteria	Gammaproteobacteria	5.15033	50.5	-	JHTA01	115	5520	5054	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640746	GCA_001266255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/255/GCA_001266255.1_302312	-	302312
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69781	52.1	-	MTUZ01	28	4814	4558	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414419	GCA_001973625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/625/GCA_001973625.1_ASM197362v1	-	CFSAN051838
Staphylococcus aureus VET0810S	1422764	PRJNA228857	228857	Terrabacteria group	Firmicutes	2.76354	32.9	-	JIJP01	46	2893	2703	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404347	GCA_000645495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/495/GCA_000645495.1_Stap_aure_VET0810S_V1	-	VET0810S
Staphylococcus aureus VET0889S	1422765	PRJNA228858	228858	Terrabacteria group	Firmicutes	2.78368	32.7	-	JIJO01	52	2908	2705	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404348	GCA_000645515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/515/GCA_000645515.1_Stap_aure_VET0889S_V1	-	VET0889S
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69822	52.1	-	MTVB01	28	4813	4558	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414417	GCA_001973645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/645/GCA_001973645.1_ASM197364v1	-	CFSAN051836
Escherichia coli	562	PRJNA237940	237940	Proteobacteria	Gammaproteobacteria	4.92931	50.5	-	JHTB01	150	5271	4837	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640747	GCA_001266275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/275/GCA_001266275.1_303139	-	303139
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35779	65.6	-	CFMT01	103	4286	4079	3/15/15	3/11/17	Scaffold	SC	SAMEA1403736	GCA_001323345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/345/GCA_001323345.1_7841_6_26	-	1837Y
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08728	39.5	-	CLLA01	55	2303	2062	3/21/15	3/11/17	Scaffold	SC	SAMEA1028876	GCA_001101885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/885/GCA_001101885.1_6938_5_5	-	SMRU2645
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10855	39.5	-	CLYM01	58	2299	2063	3/21/15	3/11/17	Scaffold	SC	SAMEA1028942	GCA_001101905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/905/GCA_001101905.1_6983_7_58	-	SMRU2362
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.43789	65.6	-	CFUI01	88	4357	4135	3/15/15	3/11/17	Scaffold	SC	SAMEA1403745	GCA_001323365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/365/GCA_001323365.1_7755_4_45	-	0787G
Escherichia coli	562	PRJNA237942	237942	Proteobacteria	Gammaproteobacteria	5.06484	50.5	-	JHTD01	86	5325	4988	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640749	GCA_001266295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/295/GCA_001266295.1_303341	-	303341
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73084	52.1	-	MTVF01	27	4857	4608	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414413	GCA_001973665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/665/GCA_001973665.1_ASM197366v1	-	CFSAN051832
Staphylococcus aureus VET0919S	1422766	PRJNA228859	228859	Terrabacteria group	Firmicutes	2.80744	32.8	-	JIJN01	40	2951	2761	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404349	GCA_000645535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/535/GCA_000645535.1_Stap_aure_VET0919S_V1	-	VET0919S
Staphylococcus aureus VET0920S	1422767	PRJNA228860	228860	Terrabacteria group	Firmicutes	2.7932	32.9	-	JIJM01	34	2918	2722	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404350	GCA_000645555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/555/GCA_000645555.1_Stap_aure_VET0920S_V1	-	VET0920S
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73088	52.1	-	MTVE01	30	4855	4607	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414414	GCA_001973675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/675/GCA_001973675.1_ASM197367v1	-	CFSAN051833
Escherichia coli	562	PRJNA237941	237941	Proteobacteria	Gammaproteobacteria	4.91183	50.5	-	JHTC01	100	5275	4827	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640748	GCA_001266305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/305/GCA_001266305.1_303301	-	303301
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36972	65.6	-	CFTY01	128	4308	4087	3/15/15	3/11/17	Scaffold	SC	SAMEA1403751	GCA_001323385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/385/GCA_001323385.1_7755_4_43	-	0785E
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.04352	39.5	-	CMMC01	66	2246	2022	3/23/15	3/4/17	Scaffold	SC	SAMEA1029259	GCA_001102005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/005/GCA_001102005.1_7068_4_14	-	SMRU3134
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.06465	39.6	-	CQXE01	91	2246	2001	3/23/15	3/6/17	Scaffold	SC	SAMEA1024009	GCA_001102025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/025/GCA_001102025.1_6714_8_23	-	SMRU575
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36176	65.6	-	CFUM01	122	4293	4075	3/15/15	3/11/17	Scaffold	SC	SAMEA1403758	GCA_001323405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/405/GCA_001323405.1_7841_7_59	-	1921P
Escherichia coli	562	PRJNA237944	237944	Proteobacteria	Gammaproteobacteria	5.03784	50.2	-	JHTE01	139	5443	4981	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640750	GCA_001266335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/335/GCA_001266335.1_400929	-	400929
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73022	52.1	-	MTVG01	26	4849	4602	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414412	GCA_001973705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/705/GCA_001973705.1_ASM197370v1	-	CFSAN051831
Staphylococcus aureus VET1020S	1422768	PRJNA228861	228861	Terrabacteria group	Firmicutes	2.75517	32.7	-	JIJL01	51	2890	2721	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404351	GCA_000645575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/575/GCA_000645575.1_Stap_aure_VET1020S_V1	-	VET1020S
Staphylococcus aureus VET1024S	1422769	PRJNA228862	228862	Terrabacteria group	Firmicutes	2.75314	32.7	-	JIJK01	45	2897	2727	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404352	GCA_000645595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/595/GCA_000645595.1_Stap_aure_VET1024S_V1	-	VET1024S
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73017	52.1	-	MTVH01	27	4850	4601	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414411	GCA_001973725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/725/GCA_001973725.1_ASM197372v1	-	CFSAN051830
Escherichia coli	562	PRJNA237945	237945	Proteobacteria	Gammaproteobacteria	4.88706	50.6	-	JHTF01	194	5256	4804	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640751	GCA_001266355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/355/GCA_001266355.1_401195	-	401195
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36534	65.6	-	CFMZ01	118	4300	4078	3/15/15	3/11/17	Scaffold	SC	SAMEA1403764	GCA_001323425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/425/GCA_001323425.1_7841_7_94	-	2079L
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.19057	39.5	-	CPTB01	72	2410	2158	3/22/15	3/4/17	Scaffold	SC	SAMEA1408266	GCA_001102045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/045/GCA_001102045.1_7444_8_60	-	0205+05018
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08783	39.7	-	CKQX01	66	2223	2007	3/21/15	3/4/17	Scaffold	SC	SAMEA1025004	GCA_001102105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/105/GCA_001102105.1_6680_7_14	-	SMRU974
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36531	65.6	-	CHYB01	117	4294	4081	4/21/15	3/11/17	Scaffold	SC	SAMEA1403767	GCA_001323445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/445/GCA_001323445.1_7769_8_72	-	1705E
Escherichia coli	562	PRJNA237946	237946	Proteobacteria	Gammaproteobacteria	4.9546	50.6	-	JHTG01	125	5248	4810	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640752	GCA_001266375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/375/GCA_001266375.1_401675	-	401675
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.7306	52.1	-	MTVI01	28	4853	4598	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414410	GCA_001973745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/745/GCA_001973745.1_ASM197374v1	-	CFSAN051829
Staphylococcus aureus VET1025S	1422770	PRJNA228863	228863	Terrabacteria group	Firmicutes	2.7542	32.7	-	JIJJ01	49	2898	2714	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404353	GCA_000645615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/615/GCA_000645615.1_Stap_aure_VET1025S_V1	-	VET1025S
Staphylococcus aureus VET1026S	1422771	PRJNA228864	228864	Terrabacteria group	Firmicutes	2.76001	32.8	-	JIJI01	47	2899	2715	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404354	GCA_000645635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/635/GCA_000645635.1_Stap_aure_VET1026S_V1	-	VET1026S
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73022	52.1	-	MTVJ01	26	4854	4605	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414409	GCA_001973755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/755/GCA_001973755.1_ASM197375v1	-	CFSAN051828
Escherichia coli	562	PRJNA237947	237947	Proteobacteria	Gammaproteobacteria	4.9864	50.9	-	JHTH01	288	5355	4893	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640753	GCA_001266385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/385/GCA_001266385.1_402559	-	402559
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36416	65.6	-	CHCD01	114	4292	4085	4/21/15	3/11/17	Scaffold	SC	SAMEA1403771	GCA_001323465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/465/GCA_001323465.1_7156_7_92	-	1679B
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.01795	39.7	-	CKEZ01	191	2242	1917	3/21/15	3/9/17	Scaffold	SC	SAMEA1023986	GCA_001102125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/125/GCA_001102125.1_6630_3_14	-	3
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14561	39.4	-	CKEP01	109	2368	2135	3/21/15	3/4/17	Scaffold	SC	SAMEA1024111	GCA_001102145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/145/GCA_001102145.1_6630_2_22	-	10B
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36753	65.6	-	CGET01	106	4289	4089	3/15/15	3/11/17	Scaffold	SC	SAMEA1403775	GCA_001323485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/485/GCA_001323485.1_7841_7_80	-	2034M
Escherichia coli	562	PRJNA237948	237948	Proteobacteria	Gammaproteobacteria	5.17083	50.5	-	JHTI01	75	5501	5133	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640754	GCA_001266405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/405/GCA_001266405.1_402981	-	402981
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73072	52.1	-	MTVK01	28	4851	4604	1/26/17	4/29/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414408	GCA_001973785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/785/GCA_001973785.1_ASM197378v1	-	CFSAN051827
Staphylococcus aureus VET1035S	1422772	PRJNA228865	228865	Terrabacteria group	Firmicutes	2.75099	32.9	-	JIJH01	42	2861	2666	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404355	GCA_000645655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/655/GCA_000645655.1_Stap_aure_VET1035S_V1	-	VET1035S
Staphylococcus aureus VET1048S	1422773	PRJNA228866	228866	Terrabacteria group	Firmicutes	2.77785	32.9	-	JIJG01	47	2878	2691	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404356	GCA_000645675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/675/GCA_000645675.1_Stap_aure_VET1048S_V1	-	VET1048S
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.72941	52.1	-	MTVL01	28	4847	4600	1/26/17	3/2/17	Contig	Center for Food Safety and Applied Nutrition	SAMN05414407	GCA_001973805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/973/805/GCA_001973805.1_ASM197380v1	-	CFSAN051826
Escherichia coli	562	PRJNA237950	237950	Proteobacteria	Gammaproteobacteria	5.16843	50.6	-	JHTK01	111	5543	5173	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640756	GCA_001266435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/435/GCA_001266435.1_403341	-	403341
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36887	65.6	-	CHCG01	114	4291	4071	4/21/15	3/11/17	Scaffold	SC	SAMEA1403778	GCA_001323525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/525/GCA_001323525.1_7755_4_38	-	type strain: 0775
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.15456	39.7	-	CMFW01	74	2349	2103	3/21/15	3/4/17	Scaffold	SC	SAMEA1028778	GCA_001102285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/285/GCA_001102285.1_7011_6_6	-	SMRU2814
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.13393	39.6	-	CMCR01	54	2352	2122	3/21/15	3/4/17	Scaffold	SC	SAMEA1029261	GCA_001102305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/305/GCA_001102305.1_7004_8_85	-	SMRU2917
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36355	65.6	-	CGGY01	109	4296	4084	3/15/15	3/11/17	Scaffold	SC	SAMEA1403781	GCA_001323545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/545/GCA_001323545.1_7769_8_93	-	1765V
Escherichia coli	562	PRJNA237951	237951	Proteobacteria	Gammaproteobacteria	4.75705	50.6	-	JHTL01	97	5024	4644	8/11/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640757	GCA_001266445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/266/445/GCA_001266445.1_700283	-	700283
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA341407	341407	Proteobacteria	Gammaproteobacteria	4.69636	52.1	-	MTGN01	32	4807	4563	2/13/17	2/22/17	Contig	California Department of Public Health	SAMN05721789	GCA_001997445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/445/GCA_001997445.1_ASM199744v1	-	CDPH_C73
Staphylococcus aureus VET1052S	1422774	PRJNA228867	228867	Terrabacteria group	Firmicutes	2.79081	32.9	-	JIJF01	54	2948	2735	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404357	GCA_000645695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/695/GCA_000645695.1_Stap_aure_VET1052S_V1	-	VET1052S
Staphylococcus aureus VET1054S	1422775	PRJNA228868	228868	Terrabacteria group	Firmicutes	2.68387	32.9	-	JIJE01	26	2760	2583	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404358	GCA_000645715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/715/GCA_000645715.1_Stap_aure_VET1054S_V1	-	VET1054S
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA374954	374954	Proteobacteria	Gammaproteobacteria	4.98764	52	-	MVJI01	172	5095	4772	3/3/17	3/15/17	Contig	Fluminense Federal University	SAMN06339792	GCA_002018325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/325/GCA_002018325.1_ASM201832v1	-	CCRJ_26
Escherichia coli	562	PRJNA237949	237949	Proteobacteria	Gammaproteobacteria	4.97595	50.3	-	JHTJ01	106	5312	4865	8/13/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640755	GCA_001267335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/335/GCA_001267335.1_403116	-	403116
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36734	65.6	-	CHCH01	112	4286	4077	4/21/15	3/11/17	Scaffold	SC	SAMEA1403791	GCA_001323585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/585/GCA_001323585.1_7841_7_54	-	1904W
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.16697	39.6	-	CLAV01	53	2394	2143	3/21/15	3/4/17	Scaffold	SC	SAMEA1025443	GCA_001102405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/405/GCA_001102405.1_6841_7_18	-	SMRU1338
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10491	39.5	-	CKLO01	117	2337	2082	3/21/15	3/4/17	Scaffold	SC	SAMEA1024118	GCA_001102425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/425/GCA_001102425.1_6641_6_9	-	23F
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36407	65.6	-	CFMU01	120	4292	4079	3/15/15	3/11/17	Scaffold	SC	SAMEA1403797	GCA_001323605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/605/GCA_001323605.1_7755_2_5	-	0107S
Escherichia coli	562	PRJNA237882	237882	Proteobacteria	Gammaproteobacteria	5.09136	50.4	-	JHRJ01	140	5464	5030	8/13/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640703	GCA_001267345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/345/GCA_001267345.1_303289	-	303289
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA374954	374954	Proteobacteria	Gammaproteobacteria	4.86986	52.2	-	MVIX01	128	4999	4667	3/3/17	3/15/17	Contig	Fluminense Federal University	SAMN06345841	GCA_002018355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/355/GCA_002018355.1_ASM201835v1	-	PPRJ_27
Staphylococcus aureus VET1068S	1422777	PRJNA228870	228870	Terrabacteria group	Firmicutes	2.69816	32.9	-	JIJD01	34	2794	2588	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404360	GCA_000645735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/735/GCA_000645735.1_Stap_aure_VET1068S_V1	-	VET1068S
Staphylococcus aureus VET1088S	1422778	PRJNA228871	228871	Terrabacteria group	Firmicutes	2.74397	32.8	-	JIJC01	25	2845	2673	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404361	GCA_000645755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/755/GCA_000645755.1_Stap_aure_VET1088S_V1	-	VET1088S
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA362548	362548	Proteobacteria	Gammaproteobacteria	5.24336	51.8541	plasmid pNDM5-SSH006:NZ_CM007781.1/CM007781.1	MTKV01	83	5476	5194	3/15/17	3/25/17	Contig	"Institute of Disease Control and Prevention, Academy of Military Medical Sciences"	SAMN06241972	GCA_002028525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/525/GCA_002028525.1_ASM202852v1	-	SSH006
Escherichia coli	562	PRJNA237919	237919	Proteobacteria	Gammaproteobacteria	5.09092	50.4	-	JHSI01	87	5455	5079	8/13/15	2/24/17	Contig	"University of Maryland, School of Medicine"	SAMN02640728	GCA_001267355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/355/GCA_001267355.1_401091	-	401091
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36715	65.6	-	CFUE01	101	4290	4080	3/15/15	3/11/17	Scaffold	SC	SAMEA1403800	GCA_001323625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/625/GCA_001323625.1_7755_4_48	-	0790K
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.04183	39.6	-	CMLL01	47	2243	2039	3/23/15	3/11/17	Scaffold	SC	SAMEA1029242	GCA_001102505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/505/GCA_001102505.1_7054_6_1	-	SMRU3073
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14957	39.5	-	CKKA01	54	2370	2146	3/21/15	3/11/17	Scaffold	SC	SAMEA1024110	GCA_001102525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/525/GCA_001102525.1_6631_6_22	-	20
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36246	65.6	-	CHXU01	99	4283	4081	4/21/15	3/11/17	Scaffold	SC	SAMEA1403805	GCA_001323645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/645/GCA_001323645.1_7755_5_49	-	0793N
Escherichia coli	562	PRJEB10166	292239	Proteobacteria	Gammaproteobacteria	4.83611	50.9	-	CXXK01	54	5014	4736	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498456	GCA_001268185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/185/GCA_001268185.1_1.EC2994.1	-	-
Salmonella enterica subsp. enterica serovar Agona	58095	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.86662	52	-	MXGR01	144	5000	4708	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367942	GCA_002030065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/065/GCA_002030065.1_ASM203006v1	-	BCW_2134
Staphylococcus aureus VET1104S	1422780	PRJNA228873	228873	Terrabacteria group	Firmicutes	2.75991	32.9	-	JIJA01	35	2866	2681	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404363	GCA_000645775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/775/GCA_000645775.1_Stap_aure_VET1104S_V1	-	VET1104S
Staphylococcus aureus VET1168S	1422781	PRJNA228874	228874	Terrabacteria group	Firmicutes	2.82251	33	-	JIIZ01	31	2945	2756	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404364	GCA_000645795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/795/GCA_000645795.1_Stap_aure_VET1168S_V1	-	VET1168S
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.05073	52.2	-	MXDP01	59	5233	4979	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357100	GCA_002030095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/095/GCA_002030095.1_ASM203009v1	-	BCW_2435
Escherichia coli	562	PRJEB10158	292231	Proteobacteria	Gammaproteobacteria	5.07079	50.8	-	CXXR01	101	5336	5037	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498448	GCA_001268205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/205/GCA_001268205.1_1.EC2733.1	-	-
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36815	65.6	-	CFUO01	94	4288	4099	3/15/15	3/11/17	Scaffold	SC	SAMEA1403811	GCA_001323665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/665/GCA_001323665.1_7841_6_5	-	1774E
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.20818	39.6	-	CLZO01	90	2414	2132	3/21/15	3/11/17	Scaffold	SC	SAMEA1028680	GCA_001102565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/565/GCA_001102565.1_6983_8_92	-	SMRU2396
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09053	39.6	-	CMLW01	60	2307	2066	3/23/15	3/11/17	Scaffold	SC	SAMEA1029283	GCA_001102625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/625/GCA_001102625.1_7054_6_20	-	SMRU3092
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36097	65.6	-	CHXY01	105	4287	4085	4/21/15	3/11/17	Scaffold	SC	SAMEA1403814	GCA_001323685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/685/GCA_001323685.1_7841_6_4	-	1773D
Escherichia coli	562	PRJEB10162	292235	Proteobacteria	Gammaproteobacteria	4.70866	50.8	-	CXWU01	53	4836	4573	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498452	GCA_001268225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/225/GCA_001268225.1_1.EC2990.1	-	-
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.57223	52.2	-	MXDN01	46	4641	4383	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357102	GCA_002030105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/105/GCA_002030105.1_ASM203010v1	-	BCW_2438
Staphylococcus aureus VET1181S	1422782	PRJNA228875	228875	Terrabacteria group	Firmicutes	2.75304	32.9	-	JIIY01	52	2885	2693	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404365	GCA_000645815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/815/GCA_000645815.1_Stap_aure_VET1181S_V1	-	VET1181S
Staphylococcus aureus VET1245S	1422783	PRJNA228876	228876	Terrabacteria group	Firmicutes	2.76868	32.9	-	JIIX01	45	2874	2692	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404366	GCA_000645835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/835/GCA_000645835.1_Stap_aure_VET1245S_V1	-	VET1245S
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.56934	52.2	-	MXDM01	62	4643	4390	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368515	GCA_002030115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/115/GCA_002030115.1_ASM203011v1	-	BCW_2439
Escherichia coli	562	PRJEB10168	292241	Proteobacteria	Gammaproteobacteria	5.02271	50.6	-	CXXI01	67	5229	4920	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498458	GCA_001268265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/265/GCA_001268265.1_1.EC2996.1	-	-
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36701	65.6	-	CFUK01	112	4287	4083	3/15/15	3/11/17	Scaffold	SC	SAMEA1403831	GCA_001323705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/705/GCA_001323705.1_7841_6_13	-	1811V
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.17133	39.7	-	CKHX01	79	2372	2129	3/21/15	3/11/17	Scaffold	SC	SAMEA1024139	GCA_001102645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/645/GCA_001102645.1_6631_3_1	-	6B
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.28465	39.9	-	CLYB01	69	2528	2262	3/21/15	3/11/17	Scaffold	SC	SAMEA1028660	GCA_001102765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/765/GCA_001102765.1_6983_6_44	-	SMRU2348
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36636	65.6	-	CFUL01	117	4291	4076	3/15/15	3/11/17	Scaffold	SC	SAMEA1403834	GCA_001323725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/725/GCA_001323725.1_7841_7_52	-	1901S
Escherichia coli	562	PRJEB10147	292220	Proteobacteria	Gammaproteobacteria	4.63064	50.7	-	CXXS01	104	4688	4408	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498437	GCA_001268285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/285/GCA_001268285.1_1.ECAJ28.1	-	-
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.34241	51.7	-	MXDR01	415	5530	5104	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368513	GCA_002030155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/155/GCA_002030155.1_ASM203015v1	-	BCW_2432
Staphylococcus aureus VET1411S	1422786	PRJNA228879	228879	Terrabacteria group	Firmicutes	2.75848	32.9	-	JIIU01	30	2862	2675	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404369	GCA_000645855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/855/GCA_000645855.1_Stap_aure_VET1411S_V1	-	VET1411S
Staphylococcus aureus VET1434S	1422789	PRJNA228882	228882	Terrabacteria group	Firmicutes	2.76667	32.9	-	JIIR01	41	2883	2691	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404372	GCA_000645875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/875/GCA_000645875.1_Stap_aure_VET1434S_V1	-	VET1434S
Salmonella enterica subsp. enterica serovar Uganda	487004	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72865	52.2	-	MXEA01	23	4783	4556	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368047	GCA_002030165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/165/GCA_002030165.1_ASM203016v1	-	BCW_2248
Escherichia coli	562	PRJEB10184	292257	Proteobacteria	Gammaproteobacteria	4.70941	50.6	-	CXYH01	63	4883	4576	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498474	GCA_001268305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/305/GCA_001268305.1_YE15	-	-
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36921	65.6	-	CGEM01	114	4299	4084	3/15/15	3/11/17	Scaffold	SC	SAMEA1403843	GCA_001323745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/745/GCA_001323745.1_7841_6_11	-	1805N
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08504	39.6	-	CKZY01	60	2259	2047	3/21/15	3/11/17	Scaffold	SC	SAMEA1025819	GCA_001102925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/925/GCA_001102925.1_6840_3_17	-	SMRU1817
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.29016	39.8	-	CLWU01	72	2464	2228	3/21/15	3/11/17	Scaffold	SC	SAMEA1028839	GCA_001102945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/945/GCA_001102945.1_6983_5_12	-	SMRU2316
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36818	65.6	-	CGEP01	122	4299	4078	3/15/15	3/11/17	Scaffold	SC	SAMEA1403848	GCA_001323765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/765/GCA_001323765.1_7755_3_57	-	0389Z
Escherichia coli	562	PRJEB10192	292265	Proteobacteria	Gammaproteobacteria	5.0805	50.6	-	CXYL01	79	5370	5010	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498482	GCA_001268325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/325/GCA_001268325.1_YE23	-	-
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.91193	52	-	MXDZ01	72	4988	4699	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368048	GCA_002030185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/185/GCA_002030185.1_ASM203018v1	-	BCW_2249
Staphylococcus aureus VET1468S	1422790	PRJNA228883	228883	Terrabacteria group	Firmicutes	2.80979	32.9	-	JIIQ01	27	2944	2760	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404373	GCA_000645895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/895/GCA_000645895.1_Stap_aure_VET1468S_V1	-	VET1468S
Staphylococcus aureus VET1495S	1422791	PRJNA228884	228884	Terrabacteria group	Firmicutes	2.75382	32.9	-	JIIP01	30	2851	2664	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404374	GCA_000645915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/915/GCA_000645915.1_Stap_aure_VET1495S_V1	-	VET1495S
Salmonella enterica subsp. enterica serovar Derby	28144	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.9451	52	-	MXEF01	118	5110	4802	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368042	GCA_002030215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/215/GCA_002030215.1_ASM203021v1	-	N37937
Escherichia coli	562	PRJEB10170	292243	Proteobacteria	Gammaproteobacteria	4.72565	50.7	-	CXXV01	117	4981	4472	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498460	GCA_001268345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/345/GCA_001268345.1_YE1	-	-
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3695	65.6	-	CFTX01	114	4294	4094	3/15/15	3/11/17	Scaffold	SC	SAMEA1403857	GCA_001323785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/785/GCA_001323785.1_7755_3_80	-	0528A
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.155	39.6	-	CKBJ01	60	2325	2015	3/21/15	3/14/17	Scaffold	SC	SAMEA974615	GCA_001103025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/025/GCA_001103025.1_6259_7_7	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.17996	39.5	-	CPUN01	90	2406	2178	3/23/15	3/11/17	Scaffold	SC	SAMEA1020602	GCA_001103085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/085/GCA_001103085.1_6569_4_7	-	PT582
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39125	65.6	-	CFTC01	107	4301	4097	3/15/15	3/11/17	Scaffold	SC	SAMEA1403858	GCA_001323805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/805/GCA_001323805.1_7156_6_10	-	1072R
Escherichia coli	562	PRJEB10199	292272	Proteobacteria	Gammaproteobacteria	4.87088	50.6	-	CXYT01	42	4962	4688	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498489	GCA_001268365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/365/GCA_001268365.1_YE30	-	-
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.93099	52.1	-	MXEE01	67	5072	4827	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368043	GCA_002030225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/225/GCA_002030225.1_ASM203022v1	-	BCW_2243
Staphylococcus aureus VET1499S	1422792	PRJNA228885	228885	Terrabacteria group	Firmicutes	2.77127	32.9	-	JIIO01	43	2884	2691	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404375	GCA_000645935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/935/GCA_000645935.1_Stap_aure_VET1499S_V1	-	VET1499S
Staphylococcus aureus VET1518S	1422794	PRJNA228887	228887	Terrabacteria group	Firmicutes	2.65301	32.8	-	JIIM01	53	2723	2552	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404377	GCA_000645955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/955/GCA_000645955.1_Stap_aure_VET1518S_V1	-	VET1518S
"Salmonella enterica subsp. enterica serovar 4,12:d:-"	1620418	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.05356	51.6	-	MXEH01	83	5149	4869	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368039	GCA_002030235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/235/GCA_002030235.1_ASM203023v1	-	BCW_2238
Escherichia coli	562	PRJEB10148	292221	Proteobacteria	Gammaproteobacteria	4.90442	50.5	-	CXXX01	86	5002	4694	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498438	GCA_001268405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/405/GCA_001268405.1_1.ECD11.1	-	-
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36699	65.6	-	CGEJ01	119	4293	4088	3/15/15	3/11/17	Scaffold	SC	SAMEA1403860	GCA_001323825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/825/GCA_001323825.1_7841_7_75	-	2023A
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.11203	39.6	-	CLLK01	81	2324	2104	3/21/15	3/11/17	Scaffold	SC	SAMEA1028980	GCA_001103105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/105/GCA_001103105.1_6938_5_23	-	SMRU2663
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08977	39.5	-	CLDU01	70	2316	2092	3/21/15	3/11/17	Scaffold	SC	SAMEA1026247	GCA_001103425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/425/GCA_001103425.1_6899_5_20	-	SMRU2060
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36693	65.6	-	CFKU01	114	4294	4086	3/15/15	3/11/17	Scaffold	SC	SAMEA1403867	GCA_001323845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/845/GCA_001323845.1_7841_7_74	-	2020X
Escherichia coli	562	PRJEB10165	292238	Proteobacteria	Gammaproteobacteria	4.97547	50.8	-	CXXA01	77	5150	4841	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498455	GCA_001268425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/425/GCA_001268425.1_1.EC2993.1	-	-
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.87608	51.9	-	MXEN01	65	4976	4709	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357028	GCA_002030285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/285/GCA_002030285.1_ASM203028v1	-	BCW_2226
Staphylococcus aureus VET1519S	1422795	PRJNA228888	228888	Terrabacteria group	Firmicutes	2.75255	32.9	-	JIIL01	43	2893	2705	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404378	GCA_000645975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/975/GCA_000645975.1_Stap_aure_VET1519S_V1	-	VET1519S
Staphylococcus aureus VET1526S	1422796	PRJNA228889	228889	Terrabacteria group	Firmicutes	2.72867	32.9	-	JIIK01	32	2828	2649	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404379	GCA_000645995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/645/995/GCA_000645995.1_Stap_aure_VET1526S_V1	-	VET1526S
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.01395	51.9	-	MXEM01	125	5138	4812	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357029	GCA_002030295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/295/GCA_002030295.1_ASM203029v1	-	BCW_2227
Escherichia coli	562	PRJEB10169	292242	Proteobacteria	Gammaproteobacteria	5.16628	50.7	-	CXXT01	138	5478	5109	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498459	GCA_001268445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/445/GCA_001268445.1_1.EC2997.1	-	-
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36864	65.6	-	CFMX01	115	4291	4079	3/15/15	3/11/17	Scaffold	SC	SAMEA1403879	GCA_001323865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/865/GCA_001323865.1_7755_5_70	-	0887Q
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	1.95388	39.8	-	CMIN01	31	2146	1931	3/23/15	3/4/17	Scaffold	SC	SAMEA1029274	GCA_001103465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/465/GCA_001103465.1_7038_7_11	-	SMRU3011
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1825	39.5	-	CKSP01	47	2428	2205	3/21/15	3/4/17	Scaffold	SC	SAMEA1026206	GCA_001103545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/545/GCA_001103545.1_6823_1_16	-	SMRU1864
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37548	65.6	-	CFTS01	91	4293	4101	3/15/15	3/11/17	Scaffold	SC	SAMEA1403890	GCA_001323925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/925/GCA_001323925.1_7755_5_71	-	0888R
Escherichia coli	562	PRJEB10197	292270	Proteobacteria	Gammaproteobacteria	4.74407	50.7	-	CXYM01	87	4893	4517	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498487	GCA_001268465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/465/GCA_001268465.1_YE28	-	-
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.59571	52.3	-	MXEI01	47	4639	4410	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368038	GCA_002030305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/305/GCA_002030305.1_ASM203030v1	-	BCW_2237
Staphylococcus aureus VET1646S	1422797	PRJNA228890	228890	Terrabacteria group	Firmicutes	2.76018	32.7	-	JIIJ01	43	2900	2718	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404380	GCA_000646015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/015/GCA_000646015.1_Stap_aure_VET1646S_V1	-	VET1646S
Staphylococcus aureus VET1653S	1422798	PRJNA228891	228891	Terrabacteria group	Firmicutes	2.75141	32.7	-	JIII01	43	2896	2720	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404381	GCA_000646035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/035/GCA_000646035.1_Stap_aure_VET1653S_V1	-	VET1653S
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.99687	52	-	MXEO01	158	5100	4780	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368028	GCA_002030345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/345/GCA_002030345.1_ASM203034v1	-	BCW_2225
Escherichia coli	562	PRJEB10193	292266	Proteobacteria	Gammaproteobacteria	4.6865	50.7	-	CXYQ01	118	4955	4447	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498483	GCA_001268485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/485/GCA_001268485.1_YE24	-	-
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37027	65.6	-	CFMY01	116	4309	4089	3/15/15	3/11/17	Scaffold	SC	SAMEA1403891	GCA_001323945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/945/GCA_001323945.1_7769_8_53	-	1522F
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.03806	39.7	-	CRBY01	72	2239	2012	3/23/15	3/4/17	Scaffold	SC	SAMEA1024839	GCA_001103685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/685/GCA_001103685.1_6731_1_5	-	SMRU989
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.22398	39.5	-	CPMT01	95	2473	2219	3/22/15	3/4/17	Scaffold	SC	SAMEA1408291	GCA_001103705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/705/GCA_001103705.1_7444_8_31	-	9901+13020
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.32784	65.6	-	CHCE01	105	4263	4065	4/21/15	3/11/17	Scaffold	SC	SAMEA1403900	GCA_001323965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/323/965/GCA_001323965.1_7755_3_75	-	0516M
Escherichia coli	562	PRJEB10185	292258	Proteobacteria	Gammaproteobacteria	5.08121	50.5	-	CXWW01	133	5326	4908	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498475	GCA_001268505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/505/GCA_001268505.1_YE16	-	-
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.24703	51.7	-	MXEP01	294	5336	5025	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368023	GCA_002030365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/365/GCA_002030365.1_ASM203036v1	-	BCW_2220
Staphylococcus aureus VET1727S	1422799	PRJNA228892	228892	Terrabacteria group	Firmicutes	2.77151	32.9	-	JIIH01	33	2878	2707	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404382	GCA_000646055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/055/GCA_000646055.1_Stap_aure_VET1727S_V1	-	VET1727S
Staphylococcus aureus VET1738S	1422800	PRJNA228893	228893	Terrabacteria group	Firmicutes	2.75421	32.9	-	JIIG01	44	2855	2669	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404383	GCA_000646075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/075/GCA_000646075.1_Stap_aure_VET1738S_V1	-	VET1738S
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.05261	52.1	-	MXEV01	124	5227	4957	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368014	GCA_002030385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/385/GCA_002030385.1_ASM203038v1	-	N32044
Escherichia coli	562	PRJEB10160	292233	Proteobacteria	Gammaproteobacteria	4.65513	50.7	-	CXWZ01	45	4805	4520	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498450	GCA_001268525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/525/GCA_001268525.1_1.EC2988.1	-	-
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.40759	65.6	-	CHXR01	104	4312	4108	4/21/15	3/11/17	Scaffold	SC	SAMEA1403914	GCA_001324005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/005/GCA_001324005.1_7755_2_12	-	0132V
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09609	39.7	-	CKGG01	108	2251	2006	3/21/15	3/11/17	Scaffold	SC	SAMEA1023904	GCA_001104125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/125/GCA_001104125.1_6630_4_7	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.00778	39.8	-	CKYS01	212	2285	1933	3/21/15	3/11/17	Scaffold	SC	SAMEA1025174	GCA_001104185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/185/GCA_001104185.1_6830_3_23	-	SMRU1655
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36994	65.6	-	CFUN01	108	4300	4086	3/15/15	3/11/17	Scaffold	SC	SAMEA1403922	GCA_001324025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/025/GCA_001324025.1_7769_8_58	-	1586A
Escherichia coli	562	PRJEB10180	292253	Proteobacteria	Gammaproteobacteria	4.99773	50.6	-	CXWX01	85	5298	4903	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498470	GCA_001268545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/545/GCA_001268545.1_YE11	-	-
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.79303	52.2	-	MXEY01	199	4992	4645	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368010	GCA_002030415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/415/GCA_002030415.1_ASM203041v1	-	BCW_2205
Staphylococcus aureus VET1779S	1422801	PRJNA228894	228894	Terrabacteria group	Firmicutes	2.75758	32.9	-	JIIF01	54	2891	2695	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404384	GCA_000646095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/095/GCA_000646095.1_Stap_aure_VET1779S_V1	-	VET1779S
Staphylococcus aureus VET1816S	1422802	PRJNA228895	228895	Terrabacteria group	Firmicutes	2.7606	32.9	-	JIIE01	26	2861	2688	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404385	GCA_000646115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/115/GCA_000646115.1_Stap_aure_VET1816S_V1	-	VET1816S
Salmonella enterica subsp. enterica serovar Brandenburg	149387	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.00706	51.8	-	MXEZ01	53	5157	4872	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368008	GCA_002030445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/445/GCA_002030445.1_ASM203044v1	-	BCW_2203
Escherichia coli	562	PRJEB10141	292215	Proteobacteria	Gammaproteobacteria	4.97677	50.6	-	CXYA01	203	5247	4835	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498363	GCA_001268565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/565/GCA_001268565.1_1.EC2923.1	-	-
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3629	65.6	-	CFMP01	109	4295	4091	3/15/15	3/11/17	Scaffold	SC	SAMEA1403936	GCA_001324065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/065/GCA_001324065.1_7156_7_81	-	0069B
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.09831	39.5	-	CPQC01	102	2284	2063	3/23/15	3/11/17	Scaffold	SC	SAMEA1020598	GCA_001104265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/265/GCA_001104265.1_6187_6_6	-	LMG1417
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08465	39.5	-	CLLI01	81	2306	2080	3/21/15	3/11/17	Scaffold	SC	SAMEA1028639	GCA_001104285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/285/GCA_001104285.1_6938_5_9	-	SMRU2649
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36974	65.6	-	CFNC01	113	4289	4085	3/15/15	3/11/17	Scaffold	SC	SAMEA1403942	GCA_001324085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/085/GCA_001324085.1_7841_7_66	-	2006G
Escherichia coli	562	PRJEB10183	292256	Proteobacteria	Gammaproteobacteria	4.83203	50.8	-	CXWR01	87	5048	4689	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498473	GCA_001268585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/585/GCA_001268585.1_YE14	-	-
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.91454	52	-	MXFA01	65	4984	4694	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368007	GCA_002030455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/455/GCA_002030455.1_ASM203045v1	-	BCW_2202
Staphylococcus aureus VET1817S	1422803	PRJNA228896	228896	Terrabacteria group	Firmicutes	2.76239	32.9	-	JIID01	29	2865	2692	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404386	GCA_000646135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/135/GCA_000646135.1_Stap_aure_VET1817S_V1	-	VET1817S
Staphylococcus aureus VET1822S	1422804	PRJNA228897	228897	Terrabacteria group	Firmicutes	2.81824	32.9	-	JIIC01	34	2945	2761	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404387	GCA_000646155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/155/GCA_000646155.1_Stap_aure_VET1822S_V1	-	VET1822S
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.75942	52	-	MXFC01	78	4834	4542	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368005	GCA_002030465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/465/GCA_002030465.1_ASM203046v1	-	BCW_2200
Escherichia coli	562	PRJEB10198	292271	Proteobacteria	Gammaproteobacteria	4.74864	50.9	-	CXYP01	68	4925	4607	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498488	GCA_001268605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/605/GCA_001268605.1_YE29	-	-
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36095	65.6	-	CIEG01	118	4288	4076	4/21/15	3/11/17	Scaffold	SC	SAMEA1403957	GCA_001324125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/125/GCA_001324125.1_7769_7_5	-	1176E
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.14971	39.5	-	CLJO01	49	2391	2168	3/21/15	3/11/17	Scaffold	SC	SAMEA1028765	GCA_001104305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/305/GCA_001104305.1_6925_7_8	-	SMRU2504
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.3632	39.7	-	CLBG01	50	2557	2342	3/21/15	3/11/17	Scaffold	SC	SAMEA1025312	GCA_001104385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/385/GCA_001104385.1_6841_7_8	-	SMRU1328
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35769	65.6	-	CHXX01	105	4288	4090	4/21/15	3/11/17	Scaffold	SC	SAMEA1403963	GCA_001324145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/145/GCA_001324145.1_7755_5_81	-	0925G
Escherichia coli	562	PRJEB10186	292259	Proteobacteria	Gammaproteobacteria	4.78294	50.8	-	CXXH01	52	4918	4551	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498476	GCA_001268625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/625/GCA_001268625.1_YE17	-	-
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70468	52.1	-	MXFG01	57	4816	4565	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368000	GCA_002030505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/505/GCA_002030505.1_ASM203050v1	-	BCW_2195
Staphylococcus aureus VET1831R	1422692	PRJNA228785	228785	Terrabacteria group	Firmicutes	2.91628	32.9	-	JIIB01	61	3072	2875	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404275	GCA_000646175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/175/GCA_000646175.1_Stap_aure_VET1831R_V1	-	VET1831R
Staphylococcus aureus VET1832R	1422693	PRJNA228786	228786	Terrabacteria group	Firmicutes	2.84177	32.8	-	JIIA01	52	2979	2787	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404276	GCA_000646195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/195/GCA_000646195.1_Stap_aure_VET1832R_V1	-	VET1832R
Salmonella enterica subsp. enterica serovar Berta	28142	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.81987	52.2	-	MXFH01	66	4928	4694	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367999	GCA_002030515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/515/GCA_002030515.1_ASM203051v1	-	BCW_2194
Escherichia coli	562	PRJEB10171	292244	Proteobacteria	Gammaproteobacteria	4.94513	50.6	-	CXWO01	66	5058	4750	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498461	GCA_001268645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/645/GCA_001268645.1_YE2	-	-
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36696	65.6	-	CFKT01	113	4302	4084	3/15/15	3/11/17	Scaffold	SC	SAMEA1403964	GCA_001324165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/165/GCA_001324165.1_7769_8_89	-	1743W
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.16961	39.6	-	CPPC01	289	2347	2140	3/23/15	3/11/17	Scaffold	SC	SAMEA682564	GCA_001104485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/485/GCA_001104485.1_5392_6_9	-	spnIC190
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14362	39.6	-	CKLT01	74	2317	1999	3/21/15	3/11/17	Scaffold	SC	SAMEA1023932	GCA_001104525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/525/GCA_001104525.1_6641_6_6	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.95762	64.2	-	CVKR01	718	4779	4459	4/2/15	3/14/17	Scaffold	SC	SAMEA1403968	GCA_001324185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/185/GCA_001324185.1_7755_3_96	-	0596Z
Escherichia coli	562	PRJEB10150	292223	Proteobacteria	Gammaproteobacteria	4.90122	50.6	-	CXXL01	441	5178	4735	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498440	GCA_001268665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/665/GCA_001268665.1_1.ECAK83.1	-	-
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.97001	51.9	-	MXFE01	87	5080	4824	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368003	GCA_002030545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/545/GCA_002030545.1_ASM203054v1	-	BCW_2198
Staphylococcus aureus VET1834R	1422695	PRJNA228788	228788	Terrabacteria group	Firmicutes	2.82604	32.8	-	JIHY01	47	2947	2760	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404278	GCA_000646215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/215/GCA_000646215.1_Stap_aure_VET1834R_V1	-	VET1834R
Staphylococcus aureus VET1835R	1422696	PRJNA228789	228789	Terrabacteria group	Firmicutes	2.86388	32.9	-	JIHX01	49	2976	2814	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404279	GCA_000646235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/235/GCA_000646235.1_Stap_aure_VET1835R_V1	-	VET1835R
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.8853	52.2	-	MXFF01	121	5022	4785	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368001	GCA_002030565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/565/GCA_002030565.1_ASM203056v1	-	BCW_2196
Escherichia coli	562	PRJEB10188	292261	Proteobacteria	Gammaproteobacteria	5.07171	50.6	-	CXYJ01	114	5336	4915	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498478	GCA_001268685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/685/GCA_001268685.1_YE19	-	-
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35492	65.6	-	CFMR01	108	4281	4077	3/15/15	3/11/17	Scaffold	SC	SAMEA1403971	GCA_001324205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/205/GCA_001324205.1_7755_2_27	-	0251Z
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.94821	39.7	-	CQQE01	49	2145	1944	3/23/15	3/11/17	Scaffold	SC	SAMEA970217	GCA_001104765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/765/GCA_001104765.1_5159_5_10	-	BHN611
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08744	39.7	-	CKRI01	56	2304	2083	3/21/15	3/11/17	Scaffold	SC	SAMEA1024808	GCA_001104825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/825/GCA_001104825.1_6680_7_22	-	SMRU982
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36978	65.6	-	CHCF01	104	4294	4089	4/21/15	3/11/17	Scaffold	SC	SAMEA1403975	GCA_001324245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/245/GCA_001324245.1_7755_3_94	-	0592V
Escherichia coli	562	PRJEB10190	292263	Proteobacteria	Gammaproteobacteria	4.7748	50.7	-	CXXZ01	85	5008	4611	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498480	GCA_001268705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/705/GCA_001268705.1_YE21	-	-
Salmonella enterica subsp. enterica serovar Mbandaka	192954	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.75271	52.1	-	MXFI01	64	4853	4593	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367998	GCA_002030575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/575/GCA_002030575.1_ASM203057v1	-	N31403
Staphylococcus aureus VET1838R	1422697	PRJNA228790	228790	Terrabacteria group	Firmicutes	2.77126	32.9	-	JIHW01	49	2873	2683	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404280	GCA_000646255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/255/GCA_000646255.1_Stap_aure_VET1838R_V1	-	VET1838R
Staphylococcus aureus VET1839R	1422698	PRJNA228791	228791	Terrabacteria group	Firmicutes	2.78099	32.9	-	JIHV01	40	2874	2692	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404281	GCA_000646275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/275/GCA_000646275.1_Stap_aure_VET1839R_V1	-	VET1839R
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.95127	52	-	MXFJ01	70	5115	4875	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367997	GCA_002030605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/605/GCA_002030605.1_ASM203060v1	-	BCW_2192
Escherichia coli	562	PRJEB10176	292249	Proteobacteria	Gammaproteobacteria	4.75005	50.6	-	CXYB01	41	4874	4601	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498466	GCA_001268725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/725/GCA_001268725.1_YE7	-	-
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37665	65.6	-	CFTL01	89	4298	4105	3/15/15	3/11/17	Scaffold	SC	SAMEA1404007	GCA_001324265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/265/GCA_001324265.1_7755_2_44	-	0305H
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15224	39.5	-	CKLY01	137	2436	2171	3/21/15	3/11/17	Scaffold	SC	SAMEA1888685	GCA_001104845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/845/GCA_001104845.1_6649_7_18	-	SMRU546
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.14889	39.7	-	CMUB01	82	2302	2020	3/23/15	3/11/17	Scaffold	SC	SAMEA1022859	GCA_001104865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/865/GCA_001104865.1_5737_3_8	-	104_72
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39167	65.6	-	CGEQ01	103	4306	4120	3/15/15	3/11/17	Scaffold	SC	SAMEA1404009	GCA_001324305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/305/GCA_001324305.1_7769_7_34	-	1397V
Escherichia coli	562	PRJEB10178	292251	Proteobacteria	Gammaproteobacteria	4.59653	50.7	-	CXWS01	105	4878	4371	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498468	GCA_001268745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/745/GCA_001268745.1_YE9	-	-
Salmonella enterica subsp. enterica serovar Berta	28142	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.88357	52.2	-	MXFK01	35	5026	4766	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367996	GCA_002030615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/615/GCA_002030615.1_ASM203061v1	-	BCW_2191
Staphylococcus aureus VET1843R	1422700	PRJNA228793	228793	Terrabacteria group	Firmicutes	2.76578	32.9	-	JIHT01	50	2869	2678	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404283	GCA_000646295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/295/GCA_000646295.1_Stap_aure_VET1843R_V1	-	VET1843R
Staphylococcus aureus VET1844R	1422701	PRJNA228794	228794	Terrabacteria group	Firmicutes	2.84517	32.9	-	JIHS01	61	2971	2766	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404284	GCA_000646315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/315/GCA_000646315.1_Stap_aure_VET1844R_V1	-	VET1844R
Salmonella enterica subsp. enterica serovar Berta	28142	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.88087	52.2	-	MXFL01	43	5018	4769	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367995	GCA_002030645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/645/GCA_002030645.1_ASM203064v1	-	BCW_2190
Escherichia coli	562	PRJEB10181	292254	Proteobacteria	Gammaproteobacteria	5.03534	50.6	-	CXYF01	61	5204	4872	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498471	GCA_001268765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/765/GCA_001268765.1_YE12	-	-
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36893	65.6	-	CFMW01	115	4303	4085	3/15/15	3/11/17	Scaffold	SC	SAMEA1404040	GCA_001324345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/345/GCA_001324345.1_7755_3_50	-	0328H
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.1697	39.5	-	CPTS01	307	2373	2161	3/23/15	3/4/17	Scaffold	SC	SAMEA682531	GCA_001105045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/045/GCA_001105045.1_5392_7_9	-	spnIC463
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21525	39.5	-	CPKT01	132	2463	2209	3/23/15	3/4/17	Scaffold	SC	SAMEA1408229	GCA_001105105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/105/GCA_001105105.1_7444_8_90	-	0509+09128
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36463	65.6	-	CFRN01	98	4294	4080	3/15/15	3/11/17	Scaffold	SC	SAMEA1469508	GCA_001324385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/385/GCA_001324385.1_7935_3_66	-	2128P
Escherichia coli	562	PRJEB10194	292267	Proteobacteria	Gammaproteobacteria	4.93395	50.7	-	CXYO01	63	5113	4805	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498484	GCA_001268785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/785/GCA_001268785.1_YE25	-	-
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.78657	52.2	-	MXFM01	63	4864	4634	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367993	GCA_002030665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/665/GCA_002030665.1_ASM203066v1	-	BCW_2188
Staphylococcus aureus VET1845R	1422702	PRJNA228795	228795	Terrabacteria group	Firmicutes	2.83336	32.9	-	JIHR01	49	2947	2746	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404285	GCA_000646335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/335/GCA_000646335.1_Stap_aure_VET1845R_V1	-	VET1845R
Staphylococcus aureus VET1846R	1422703	PRJNA228796	228796	Terrabacteria group	Firmicutes	2.73338	32.9	-	JIHQ01	29	2838	2657	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404286	GCA_000646355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/355/GCA_000646355.1_Stap_aure_VET1846R_V1	-	VET1846R
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.16911	51.8	-	MXFS01	367	5295	4984	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367986	GCA_002030685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/685/GCA_002030685.1_ASM203068v1	-	BCW_2180
Escherichia coli	562	PRJEB10191	292264	Proteobacteria	Gammaproteobacteria	4.63505	50.8	-	CXYN01	127	4969	4438	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498481	GCA_001268805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/805/GCA_001268805.1_YE22	-	-
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36458	65.6	-	CVMC01	105	4300	4084	4/10/15	3/11/17	Scaffold	SC	SAMEA1469509	GCA_001324405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/405/GCA_001324405.1_7935_3_88	-	H114060062
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99341	39.7	-	CQRI01	37	2201	1985	3/23/15	3/4/17	Scaffold	SC	SAMEA970204	GCA_001105125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/125/GCA_001105125.1_5159_7_8	-	BHN636
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.17206	39.5	-	CKRB01	60	2414	2164	3/21/15	3/4/17	Scaffold	SC	SAMEA1025028	GCA_001105165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/165/GCA_001105165.1_6680_7_16	-	SMRU976
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35632	65.6	-	CVME01	96	4290	4080	4/10/15	3/11/17	Scaffold	SC	SAMEA1469511	GCA_001324425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/425/GCA_001324425.1_7935_3_89	-	H114540002
Escherichia coli	562	PRJEB10177	292250	Proteobacteria	Gammaproteobacteria	5.13287	50.7	-	CXYI01	157	5450	4895	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498467	GCA_001268825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/825/GCA_001268825.1_YE8	-	-
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.94845	52	-	MXDO01	96	5077	4806	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357101	GCA_002030705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/705/GCA_002030705.1_ASM203070v1	-	BCW_2436
Staphylococcus aureus VET1848R	1422704	PRJNA228797	228797	Terrabacteria group	Firmicutes	2.82017	32.9	-	JIHP01	35	2958	2768	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404287	GCA_000646375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/375/GCA_000646375.1_Stap_aure_VET1848R_V1	-	VET1848R
Staphylococcus aureus VET1849R	1422705	PRJNA228798	228798	Terrabacteria group	Firmicutes	2.81772	32.9	-	JIHO01	38	2921	2751	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404288	GCA_000646395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/395/GCA_000646395.1_Stap_aure_VET1849R_V1	-	VET1849R
Salmonella enterica subsp. enterica serovar Reading	165302	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.57684	52.2	-	MXDS01	186	4716	4379	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368512	GCA_002030715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/715/GCA_002030715.1_ASM203071v1	-	BCW_2431
Escherichia coli	562	PRJEB10172	292245	Proteobacteria	Gammaproteobacteria	4.75019	50.6	-	CXXM01	67	4940	4592	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498462	GCA_001268845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/845/GCA_001268845.1_YE3	-	-
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37691	65.6	-	CVMF01	105	4287	4072	4/10/15	3/11/17	Scaffold	SC	SAMEA1469512	GCA_001324445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/445/GCA_001324445.1_7935_3_90	-	M0506147
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.16261	39.6	-	CLIM01	67	2405	2172	3/21/15	3/4/17	Scaffold	SC	SAMEA1026109	GCA_001105185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/185/GCA_001105185.1_6925_6_23	-	SMRU2207
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.0728	39.6	-	CMHH01	56	2270	2012	3/23/15	3/4/17	Scaffold	SC	SAMEA1029254	GCA_001105305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/305/GCA_001105305.1_7038_5_21	-	SMRU2973
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36587	65.6	-	CFKH01	102	4291	4092	3/15/15	3/11/17	Scaffold	SC	SAMEA1469513	GCA_001324465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/465/GCA_001324465.1_7935_3_71	-	2139B
Escherichia coli	562	PRJEB10142	292216	Proteobacteria	Gammaproteobacteria	4.77891	50.8	-	CXXC01	76	4889	4643	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498369	GCA_001268865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/865/GCA_001268865.1_1.EC2739.1	-	-
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70061	52.1	-	MXDT01	91	4831	4554	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368510	GCA_002030735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/735/GCA_002030735.1_ASM203073v1	-	BCW_2429
Staphylococcus aureus VET1850R	1422706	PRJNA228799	228799	Terrabacteria group	Firmicutes	2.81568	32.8	-	JIHN01	34	2956	2762	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404289	GCA_000646415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/415/GCA_000646415.1_Stap_aure_VET1850R_V1	-	VET1850R
Staphylococcus aureus VET1851R	1422707	PRJNA228800	228800	Terrabacteria group	Firmicutes	2.85385	32.9	-	JIHM01	57	2996	2796	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404290	GCA_000646435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/435/GCA_000646435.1_Stap_aure_VET1851R_V1	-	VET1851R
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.87658	52	-	MXDU01	274	5048	4639	3/17/17	4/10/17	Contig	University of California at Davis	SAMN02368509	GCA_002030765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/765/GCA_002030765.1_ASM203076v1	-	BCW_2428
Escherichia coli	562	PRJEB10156	292229	Proteobacteria	Gammaproteobacteria	5.01207	50.6	-	CXXE01	100	5238	4911	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498446	GCA_001268885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/885/GCA_001268885.1_1.EC2731.1	-	-
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36469	65.6	-	CGES01	100	4299	4085	3/15/15	3/11/17	Scaffold	SC	SAMEA1469516	GCA_001324485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/485/GCA_001324485.1_7935_3_68	-	2133V
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10473	39.6	-	CMAU01	65	2361	2110	3/21/15	3/4/17	Scaffold	SC	SAMEA1028748	GCA_001105325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/325/GCA_001105325.1_7004_6_29	-	SMRU2837
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11818	39.6	-	CMLV01	64	2351	2114	3/22/15	3/4/17	Scaffold	SC	SAMEA1029324	GCA_001105385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/385/GCA_001105385.1_7054_6_18	-	SMRU3090
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36469	65.6	-	CVMD01	109	4294	4076	4/10/15	3/11/17	Scaffold	SC	SAMEA1469517	GCA_001324505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/505/GCA_001324505.1_7935_3_86	-	H112260020
Escherichia coli	562	PRJEB10179	292252	Proteobacteria	Gammaproteobacteria	5.03465	50.6	-	CXWT01	107	5288	4866	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498469	GCA_001268905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/905/GCA_001268905.1_YE10	-	-
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.09098	52.1	-	MXEB01	138	5291	5024	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368046	GCA_002030775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/775/GCA_002030775.1_ASM203077v1	-	BCW_2247
Staphylococcus aureus VET1852R	1422708	PRJNA228801	228801	Terrabacteria group	Firmicutes	2.79346	32.9	-	JIHL01	51	2894	2699	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404291	GCA_000646455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/455/GCA_000646455.1_Stap_aure_VET1852R_V1	-	VET1852R
Staphylococcus aureus VET1853R	1422709	PRJNA228802	228802	Terrabacteria group	Firmicutes	2.80089	32.9	-	JIHK01	52	2936	2736	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404292	GCA_000646475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/475/GCA_000646475.1_Stap_aure_VET1853R_V1	-	VET1853R
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.88445	52.1	-	MXED01	76	5014	4777	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357031	GCA_002030825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/825/GCA_002030825.1_ASM203082v1	-	BCW_2244
Escherichia coli	562	PRJEB10173	292246	Proteobacteria	Gammaproteobacteria	4.76623	50.8	-	CXYK01	59	4962	4587	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498463	GCA_001268945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/945/GCA_001268945.1_YE4	-	-
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36032	65.6	-	CVMB01	113	4295	4090	4/10/15	3/11/17	Scaffold	SC	SAMEA1469518	GCA_001324525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/525/GCA_001324525.1_7935_3_87	-	H112460232
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09702	39.7	-	CKBI01	56	2339	2107	3/21/15	3/6/17	Scaffold	SC	SAMEA974670	GCA_001105405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/405/GCA_001105405.1_6259_7_4	-	6A
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.09558	39.5	-	CPPE01	80	2274	2060	3/23/15	3/4/17	Scaffold	SC	SAMEA770020	GCA_001105465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/465/GCA_001105465.1_5242_2_9	-	12F/2
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38679	65.6	-	CVLZ01	100	4307	4069	4/10/15	3/11/17	Scaffold	SC	SAMEA1469519	GCA_001324545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/545/GCA_001324545.1_7935_3_84	-	H111900040
Escherichia coli	562	PRJEB10149	292222	Proteobacteria	Gammaproteobacteria	4.98911	50.6	-	CXYD01	318	5307	4864	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498439	GCA_001268965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/965/GCA_001268965.1_1.ECD03.1	-	-
"Salmonella enterica subsp. arizonae serovar 18:z4,z23:-"	1192839	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.47018	51.5	-	MXEK01	64	4469	4027	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368034	GCA_002030835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/835/GCA_002030835.1_ASM203083v1	-	BCW_2233
Staphylococcus aureus VET1854R	1422710	PRJNA228803	228803	Terrabacteria group	Firmicutes	2.79793	32.9	-	JIHJ01	52	2935	2735	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404293	GCA_000646495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/495/GCA_000646495.1_Stap_aure_VET1854R_V1	-	VET1854R
Staphylococcus aureus VET1855R	1422711	PRJNA228804	228804	Terrabacteria group	Firmicutes	2.81032	32.9	-	JIHI01	58	2963	2758	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404294	GCA_000646515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/515/GCA_000646515.1_Stap_aure_VET1855R_V1	-	VET1855R
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.6794	52.2	-	MXEJ01	59	4748	4509	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368036	GCA_002030855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/855/GCA_002030855.1_ASM203085v1	-	BCW_2235
Escherichia coli	562	PRJEB10146	292219	Proteobacteria	Gammaproteobacteria	4.94258	50.8	-	CXXW01	66	5030	4752	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498436	GCA_001268985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/985/GCA_001268985.1_1.ECB31.1	-	-
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37226	65.6	-	CIEM01	112	4303	4088	4/21/15	3/11/17	Scaffold	SC	SAMEA1469520	GCA_001324565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/565/GCA_001324565.1_7935_3_77	-	2152Q
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.0796	39.6	-	CKLQ01	82	2290	2036	3/21/15	3/15/17	Scaffold	SC	SAMEA1023682	GCA_001105545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/545/GCA_001105545.1_6641_6_3	-	14
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.0367	39.7	-	CPKO01	53	2221	2034	3/22/15	3/11/17	Scaffold	SC	SAMEA682371	GCA_001105585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/585/GCA_001105585.1_5366_6_5	-	08B08538
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3694	65.6	-	CFRM01	111	4288	4080	3/15/15	3/11/17	Scaffold	SC	SAMEA1469522	GCA_001324605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/605/GCA_001324605.1_7935_3_74	-	2145H
Escherichia coli	562	PRJEB10187	292260	Proteobacteria	Gammaproteobacteria	4.8059	50.9	-	CXXD01	77	5066	4754	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498477	GCA_001269005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/005/GCA_001269005.1_YE18	-	-
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.93144	52.2	-	MXEQ01	116	5112	4855	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368022	GCA_002030885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/885/GCA_002030885.1_ASM203088v1	-	BCW_2218
Staphylococcus aureus VET1856R	1422712	PRJNA228805	228805	Terrabacteria group	Firmicutes	2.81173	32.9	-	JIHH01	56	2962	2761	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404295	GCA_000646535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/535/GCA_000646535.1_Stap_aure_VET1856R_V1	-	VET1856R
Staphylococcus aureus VET1859R	1422714	PRJNA228807	228807	Terrabacteria group	Firmicutes	2.82708	32.9	-	JIHF01	56	2903	2741	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404297	GCA_000646555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/555/GCA_000646555.1_Stap_aure_VET1859R_V1	-	VET1859R
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.76916	52.2	-	MXEW01	66	4850	4612	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357027	GCA_002030895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/895/GCA_002030895.1_ASM203089v1	-	BCW_2209
Escherichia coli	562	PRJEB10161	292234	Proteobacteria	Gammaproteobacteria	4.95871	50.7	-	CXYE01	90	5144	4826	8/7/15	2/25/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498451	GCA_001269025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/025/GCA_001269025.1_1.EC2989.1	-	-
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36633	65.6	-	CVLW01	98	4285	4072	4/10/15	3/11/17	Scaffold	SC	SAMEA1469523	GCA_001324625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/625/GCA_001324625.1_7935_3_82	-	H111880072
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04503	39.6	-	CJZU01	211	2229	1981	3/21/15	3/11/17	Scaffold	SC	SAMEA974691	GCA_001105685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/685/GCA_001105685.1_6259_5_3	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12558	39.6	-	CMLQ01	60	2285	2001	3/22/15	3/11/17	Scaffold	SC	SAMEA1029257	GCA_001105745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/745/GCA_001105745.1_7054_6_2	-	SMRU3074
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38611	65.6	-	CVLU01	98	4306	4096	4/10/15	3/11/17	Scaffold	SC	SAMEA1469527	GCA_001324665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/665/GCA_001324665.1_7935_3_79	-	H111280014
Escherichia coli	562	PRJEB10163	292236	Proteobacteria	Gammaproteobacteria	4.97176	50.8	-	CXYC01	80	5142	4841	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498453	GCA_001269085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/085/GCA_001269085.1_1.EC2991.1	-	-
Salmonella enterica subsp. enterica serovar Senftenberg	28150	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.8998	52	-	MXEL01	72	5008	4741	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368029	GCA_002030925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/925/GCA_002030925.1_ASM203092v1	-	BCW_2228
Staphylococcus aureus VET1860R	1422715	PRJNA228808	228808	Terrabacteria group	Firmicutes	2.83529	32.8	-	JIHE01	37	2969	2778	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404298	GCA_000646575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/575/GCA_000646575.1_Stap_aure_VET1860R_V1	-	VET1860R
Staphylococcus aureus VET1861R	1422716	PRJNA228809	228809	Terrabacteria group	Firmicutes	2.84514	32.8	-	JIHD01	43	2983	2798	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404299	GCA_000646595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/595/GCA_000646595.1_Stap_aure_VET1861R_V1	-	VET1861R
Salmonella enterica subsp. enterica serovar Litchfield	486998	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69046	52.2	-	MXEX01	112	4770	4536	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368013	GCA_002030935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/935/GCA_002030935.1_ASM203093v1	-	N32042
Escherichia coli	562	PRJEB10145	292218	Proteobacteria	Gammaproteobacteria	4.84321	50.5	-	CXWP01	59	4982	4660	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498435	GCA_001269105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/105/GCA_001269105.1_1.ECAD27.1	-	-
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36518	65.6	-	CHYC01	96	4295	4074	4/21/15	3/11/17	Scaffold	SC	SAMEA1469528	GCA_001324685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/685/GCA_001324685.1_7935_3_72	-	2140C
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.05092	39.5	-	CQZG01	73	2256	2040	3/23/15	3/11/17	Scaffold	SC	SAMEA1025102	GCA_001105965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/965/GCA_001105965.1_6730_5_1	-	SMRU649
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.16424	39.6	-	CMCM01	86	2412	2163	3/21/15	3/11/17	Scaffold	SC	SAMEA1029244	GCA_001106025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/025/GCA_001106025.1_7004_8_86	-	SMRU2918
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35522	65.6	-	CVLV01	88	4274	4083	4/10/15	3/11/17	Scaffold	SC	SAMEA1469531	GCA_001324705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/705/GCA_001324705.1_7935_3_81	-	H111280018
Escherichia coli	562	PRJEB10195	292268	Proteobacteria	Gammaproteobacteria	4.69379	50.9	-	CXYS01	131	5102	4539	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498485	GCA_001269125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/125/GCA_001269125.1_YE26	-	-
Salmonella enterica subsp. enterica serovar Derby	28144	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.96063	52.1	-	MXFD01	61	5077	4805	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368004	GCA_002030965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/965/GCA_002030965.1_ASM203096v1	-	BCW_2199
Staphylococcus aureus VET1865R	1422717	PRJNA228810	228810	Terrabacteria group	Firmicutes	2.78358	32.8	-	JIHC01	37	2891	2693	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404300	GCA_000646615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/615/GCA_000646615.1_Stap_aure_VET1865R_V1	-	VET1865R
Staphylococcus aureus VET1866R	1422718	PRJNA228811	228811	Terrabacteria group	Firmicutes	2.73856	32.9	-	JIHB01	23	2846	2660	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404301	GCA_000646635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/635/GCA_000646635.1_Stap_aure_VET1866R_V1	-	VET1866R
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70792	52.2	-	MXFB01	41	4795	4552	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368006	GCA_002030975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/975/GCA_002030975.1_ASM203097v1	-	BCW_2201
Escherichia coli	562	PRJEB10189	292262	Proteobacteria	Gammaproteobacteria	4.75078	50.8	-	CXWQ01	74	4945	4637	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498479	GCA_001269145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/145/GCA_001269145.1_YE20	-	-
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35863	65.6	-	CHCL01	88	4288	4045	4/21/15	3/11/17	Scaffold	SC	SAMEA1707117	GCA_001324725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/725/GCA_001324725.1_8898_8_66	-	2180W
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.08065	39.6	-	CMKK01	45	2293	2067	3/23/15	3/11/17	Scaffold	SC	SAMEA1029442	GCA_001106125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/125/GCA_001106125.1_7054_4_7	-	SMRU3031
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.18473	39.6	-	CKCT01	79	2426	2180	3/21/15	3/11/17	Scaffold	SC	SAMEA1023725	GCA_001106185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/185/GCA_001106185.1_6593_5_14	-	14
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35717	65.6	-	CFRR01	81	4285	4061	3/15/15	3/11/17	Scaffold	SC	SAMEA1707120	GCA_001324745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/745/GCA_001324745.1_8987_4_90	-	0183A
Escherichia coli	562	PRJEB10196	292269	Proteobacteria	Gammaproteobacteria	4.76328	50.9	-	CXYR01	139	5092	4611	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498486	GCA_001269165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/165/GCA_001269165.1_YE27	-	-
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.01443	52	-	MXFN01	68	5159	4895	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367992	GCA_002030995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/995/GCA_002030995.1_ASM203099v1	-	BCW_2187
Staphylococcus aureus VET1867R	1422719	PRJNA228812	228812	Terrabacteria group	Firmicutes	2.70519	32.9	-	JIHA01	23	2781	2600	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404302	GCA_000646655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/655/GCA_000646655.1_Stap_aure_VET1867R_V1	-	VET1867R
Staphylococcus aureus VET1868R	1422720	PRJNA228813	228813	Terrabacteria group	Firmicutes	2.7763	32.8	-	JIGZ01	45	2900	2697	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404303	GCA_000646675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/675/GCA_000646675.1_Stap_aure_VET1868R_V1	-	VET1868R
Salmonella enterica subsp. enterica serovar Alachua	913240	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.05619	52.2	-	MXFO01	61	5210	4925	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367991	GCA_002031025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/025/GCA_002031025.1_ASM203102v1	-	BCW_2186
Escherichia coli	562	PRJEB10182	292255	Proteobacteria	Gammaproteobacteria	4.81018	50.8	-	CXXU01	72	4954	4661	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498472	GCA_001269185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/185/GCA_001269185.1_YE13	-	-
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35369	65.6	-	CIIY01	87	4287	4059	4/21/15	3/11/17	Scaffold	SC	SAMEA1707126	GCA_001324765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/765/GCA_001324765.1_8987_4_78	-	0647E
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07458	39.6	-	CKBR01	35	2278	2054	3/21/15	3/11/17	Scaffold	SC	SAMEA974663	GCA_001106245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/245/GCA_001106245.1_6259_8_24	-	16F
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.03197	39.7	-	CJZI01	72	2211	1992	3/21/15	3/11/17	Scaffold	SC	SAMEA974694	GCA_001106285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/285/GCA_001106285.1_6259_5_10	-	33C
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35955	65.6	-	CFUT01	73	4265	4074	3/15/15	3/11/17	Scaffold	SC	SAMEA1707142	GCA_001324785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/785/GCA_001324785.1_8898_8_21	-	2251Y
Escherichia coli	562	PRJEB10167	292240	Proteobacteria	Gammaproteobacteria	5.02134	50.6	-	CXXN01	67	5225	4911	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498457	GCA_001269205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/205/GCA_001269205.1_1.EC2995.1	-	-
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.87408	52	-	MXFP01	54	4953	4669	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367990	GCA_002031045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/045/GCA_002031045.1_ASM203104v1	-	BCW_2185
Staphylococcus aureus VET1871R	1422722	PRJNA228815	228815	Terrabacteria group	Firmicutes	2.80453	32.9	-	JIGX01	57	2932	2733	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404305	GCA_000646695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/695/GCA_000646695.1_Stap_aure_VET1871R_V1	-	VET1871R
Staphylococcus aureus VET1872R	1422723	PRJNA228816	228816	Terrabacteria group	Firmicutes	2.80915	32.9	-	JIGW01	54	2947	2740	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404306	GCA_000646715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/715/GCA_000646715.1_Stap_aure_VET1872R_V1	-	VET1872R
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.85241	52.2	-	MXFQ01	59	4971	4743	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367988	GCA_002031055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/055/GCA_002031055.1_ASM203105v1	-	BCW_2183
Escherichia coli	562	PRJEB10159	292232	Proteobacteria	Gammaproteobacteria	4.72977	50.8	-	CXXO01	68	4831	4572	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498449	GCA_001269225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/225/GCA_001269225.1_1.EC2987.1	-	-
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35668	65.6	-	CFNF01	88	4276	4063	3/15/15	3/11/17	Scaffold	SC	SAMEA1707145	GCA_001324805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/805/GCA_001324805.1_8987_4_1	-	0011N
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.27831	39.5	-	CKXS01	110	2536	2272	3/21/15	3/11/17	Scaffold	SC	SAMEA1026232	GCA_001106325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/325/GCA_001106325.1_6823_7_11	-	SMRU2003
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.20905	39.5	-	CPNE01	137	2449	2212	3/23/15	3/11/17	Scaffold	SC	SAMEA1408208	GCA_001106345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/345/GCA_001106345.1_7444_8_63	-	0208+13020
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35455	65.6	-	CIIV01	66	4266	4058	4/21/15	3/11/17	Scaffold	SC	SAMEA1707159	GCA_001324825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/825/GCA_001324825.1_8939_3_13	-	2411X
Escherichia coli	562	PRJEB10174	292247	Proteobacteria	Gammaproteobacteria	4.68071	50.8	-	CXXQ01	61	4797	4512	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498464	GCA_001269245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/245/GCA_001269245.1_YE5	-	-
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.9346	52	-	MXFT01	94	5041	4797	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367985	GCA_002031105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/105/GCA_002031105.1_ASM203110v1	-	BCW_2179
Staphylococcus aureus VET1873R	1422724	PRJNA228817	228817	Terrabacteria group	Firmicutes	2.79318	32.8	-	JIGV01	32	2890	2708	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404307	GCA_000646735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/735/GCA_000646735.1_Stap_aure_VET1873R_V1	-	VET1873R
Staphylococcus aureus VET1875R	1422725	PRJNA228818	228818	Terrabacteria group	Firmicutes	2.82648	32.8	-	JIGU01	50	2964	2763	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404308	GCA_000646755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/755/GCA_000646755.1_Stap_aure_VET1875R_V1	-	VET1875R
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7954	52.1	-	MXFW01	54	4905	4665	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367983	GCA_002031125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/125/GCA_002031125.1_ASM203112v1	-	BCW_2176
Escherichia coli	562	PRJEB10154	292227	Proteobacteria	Gammaproteobacteria	4.65193	50.8	-	CXXP01	82	4786	4508	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498444	GCA_001269265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/265/GCA_001269265.1_1.EC2723.1	-	-
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35813	65.6	-	CHCP01	74	4279	4064	4/21/15	3/11/17	Scaffold	SC	SAMEA1707162	GCA_001324845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/845/GCA_001324845.1_8987_5_39	-	2594W
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.13086	39.7	-	CMRH01	40	2362	2151	3/22/15	3/11/17	Scaffold	SC	SAMEA2061744	GCA_001106365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/365/GCA_001106365.1_9803_8_37	-	6A
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12687	39.5	-	CLXZ01	46	2359	2126	3/21/15	3/11/17	Scaffold	SC	SAMEA1028770	GCA_001106405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/405/GCA_001106405.1_6983_6_38	-	SMRU2342
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36228	65.6	-	CHCR01	72	4287	4084	4/21/15	3/11/17	Scaffold	SC	SAMEA1707164	GCA_001324865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/865/GCA_001324865.1_8987_4_70	-	0646D
Escherichia coli	562	PRJEB10164	292237	Proteobacteria	Gammaproteobacteria	5.23851	50.6	-	CXXG01	80	5419	5051	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498454	GCA_001269285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/285/GCA_001269285.1_1.EC2992.1	-	-
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.16413	51.7	-	MXFY01	166	5273	4921	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367981	GCA_002031145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/145/GCA_002031145.1_ASM203114v1	-	BCW_2174
Staphylococcus aureus VET1877R	1422727	PRJNA228820	228820	Terrabacteria group	Firmicutes	2.79257	32.8	-	JIGS01	27	2898	2717	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404310	GCA_000646775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/775/GCA_000646775.1_Stap_aure_VET1877R_V1	-	VET1877R
Staphylococcus aureus VET1880R	1422728	PRJNA228821	228821	Terrabacteria group	Firmicutes	2.80551	32.9	-	JIGR01	48	2905	2707	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404311	GCA_000646795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/795/GCA_000646795.1_Stap_aure_VET1880R_V1	-	VET1880R
Salmonella enterica subsp. enterica serovar Hindmarsh	1079901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.79589	52.1	-	MXFZ01	360	5066	4627	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367980	GCA_002031165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/165/GCA_002031165.1_ASM203116v1	-	N30673
Escherichia coli	562	PRJEB10144	292217	Proteobacteria	Gammaproteobacteria	5.18037	50.5	-	CXWY01	133	5452	5107	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498376	GCA_001269305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/305/GCA_001269305.1_1.ECAF83.1	-	-
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.41683	65.6	-	CIEI01	79	4327	4070	4/21/15	3/11/17	Scaffold	SC	SAMEA1707170	GCA_001324885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/885/GCA_001324885.1_8987_5_40	-	2597Z
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07362	39.6	-	CKLB01	91	2281	2026	3/21/15	3/14/17	Scaffold	SC	SAMEA1023761	GCA_001106445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/445/GCA_001106445.1_6641_6_13	-	33B
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09942	39.7	-	CMFZ01	47	2327	2061	3/21/15	3/11/17	Scaffold	SC	SAMEA1029204	GCA_001106485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/485/GCA_001106485.1_7038_4_13	-	SMRU2941
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35748	65.6	-	CFLW01	86	4288	4050	3/15/15	3/11/17	Scaffold	SC	SAMEA1707188	GCA_001324905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/905/GCA_001324905.1_8987_4_95	-	0733Y
Escherichia coli	562	PRJEB10175	292248	Proteobacteria	Gammaproteobacteria	5.02153	50.7	-	CXYG01	92	5297	4929	8/7/15	2/24/17	Contig	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498465	GCA_001269325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/325/GCA_001269325.1_YE6	-	-
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.91424	51.9	-	MXFX01	371	5165	4646	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367982	GCA_002031175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/175/GCA_002031175.1_ASM203117v1	-	BCW_2175
Staphylococcus aureus VET1884R	1422729	PRJNA228822	228822	Terrabacteria group	Firmicutes	2.79477	32.9	-	JIGQ01	41	2928	2730	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404312	GCA_000646815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/815/GCA_000646815.1_Stap_aure_VET1884R_V1	-	VET1884R
Staphylococcus aureus VET1886R	1422730	PRJNA228823	228823	Terrabacteria group	Firmicutes	2.76964	32.8	-	JIGP01	28	2882	2699	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404313	GCA_000646835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/835/GCA_000646835.1_Stap_aure_VET1886R_V1	-	VET1886R
Salmonella enterica subsp. enterica serovar Reading	165302	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70821	52.1	-	MXGB01	188	4799	4534	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367978	GCA_002031205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/205/GCA_002031205.1_ASM203120v1	-	BCW_2171
Escherichia coli	562	PRJNA285410	285410	Proteobacteria	Gammaproteobacteria	5.09136	50.6	-	LDVY01	289	5351	5014	8/31/15	2/24/17	Contig	University of Queensland	SAMN03753643	GCA_001276265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/265/GCA_001276265.1_ASM127626v1	-	C8
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35834	65.6	-	CFUV01	80	4278	4054	3/15/15	3/11/17	Scaffold	SC	SAMEA1707191	GCA_001324925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/925/GCA_001324925.1_8987_4_91	-	0385V
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.16153	39.6	-	CKCW01	59	2354	2121	3/21/15	3/11/17	Scaffold	SC	SAMEA1023742	GCA_001106505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/505/GCA_001106505.1_6593_5_13	-	6B
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09519	39.5	-	CKZJ01	57	2304	2060	3/21/15	3/4/17	Scaffold	SC	SAMEA1026235	GCA_001106585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/585/GCA_001106585.1_6840_1_15	-	SMRU1767
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36009	65.6	-	CFVB01	78	4294	4039	3/15/15	3/11/17	Scaffold	SC	SAMEA1707192	GCA_001324945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/945/GCA_001324945.1_8987_5_17	-	2564N
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.04779	50.6	-	CYCY01	180	5376	4962	8/22/15	2/24/17	Contig	SC	SAMEA1466120	GCA_001277395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/395/GCA_001277395.1_7790_1_92	-	402058_aEPEC
Salmonella enterica subsp. enterica serovar Agona	58095	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.84782	51.9	-	MXGD01	90	4942	4686	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367975	GCA_002031215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/215/GCA_002031215.1_ASM203121v1	-	BCW_2168
Staphylococcus aureus VET1890R	1422731	PRJNA228824	228824	Terrabacteria group	Firmicutes	2.8164	32.9	-	JIGO01	38	2941	2754	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404314	GCA_000646855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/855/GCA_000646855.1_Stap_aure_VET1890R_V1	-	VET1890R
Staphylococcus aureus VET1892R	1422732	PRJNA228825	228825	Terrabacteria group	Firmicutes	2.80287	32.8	-	JIGN01	36	2929	2740	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404315	GCA_000646875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/875/GCA_000646875.1_Stap_aure_VET1892R_V1	-	VET1892R
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.73964	52.1	-	MXGC01	63	4843	4606	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367977	GCA_002031245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/245/GCA_002031245.1_ASM203124v1	-	BCW_2170
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.74489	50.5	-	CXZE01	85	4973	4613	8/22/15	2/24/17	Contig	SC	SAMEA1466121	GCA_001277415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/415/GCA_001277415.1_7748_7_42	-	602370_aEPEC
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37759	65.6	-	CIIS01	79	4300	4066	4/21/15	3/11/17	Scaffold	SC	SAMEA1707194	GCA_001324965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/965/GCA_001324965.1_8898_8_44	-	2234E
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08118	39.5	-	CQXQ01	47	2316	2068	3/23/15	3/6/17	Scaffold	SC	SAMEA1024754	GCA_001106605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/605/GCA_001106605.1_6730_1_4	-	SMRU580
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.0825	39.7	-	CMFE01	59	2318	2101	3/21/15	3/4/17	Scaffold	SC	SAMEA1028665	GCA_001106705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/705/GCA_001106705.1_7011_6_1	-	SMRU2809
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35867	65.6	-	CFVE01	76	4268	4046	3/15/15	3/11/17	Scaffold	SC	SAMEA1707198	GCA_001324985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/324/985/GCA_001324985.1_8987_4_76	-	0464F
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.50905	50.4	-	CYAE01	158	5916	5432	8/22/15	2/24/17	Contig	SC	SAMEA1466122	GCA_001277435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/435/GCA_001277435.1_7748_7_2	-	100554_aEPEC
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.00995	52.1	-	MXGG01	71	5163	4904	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367970	GCA_002031265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/265/GCA_002031265.1_ASM203126v1	-	BCW_2163
Staphylococcus aureus VET1893R	1422733	PRJNA228826	228826	Terrabacteria group	Firmicutes	2.87257	32.9	-	JIGM01	45	3011	2818	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404316	GCA_000646895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/895/GCA_000646895.1_Stap_aure_VET1893R_V1	-	VET1893R
Staphylococcus aureus VET1895R	1422734	PRJNA228827	228827	Terrabacteria group	Firmicutes	2.76451	32.9	-	JIGL01	33	2854	2673	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404317	GCA_000646915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/915/GCA_000646915.1_Stap_aure_VET1895R_V1	-	VET1895R
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.07335	51.8	-	MXGE01	135	5209	4935	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367974	GCA_002031275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/275/GCA_002031275.1_ASM203127v1	-	BCW_2167
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.62592	50.6	-	CXZD01	69	4814	4484	8/22/15	2/24/17	Contig	SC	SAMEA1466123	GCA_001277455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/455/GCA_001277455.1_7553_7_63	-	505393_aEPEC
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3586	65.6	-	CHYH01	81	4295	4071	4/21/15	3/11/17	Scaffold	SC	SAMEA1707218	GCA_001325005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/005/GCA_001325005.1_8987_5_32	-	2581G
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.16024	39.7	-	CMGB01	48	2365	2127	3/21/15	3/4/17	Scaffold	SC	SAMEA1029397	GCA_001106845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/845/GCA_001106845.1_7038_4_18	-	SMRU2946
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.19203	39.6	-	CKUT01	69	2494	2243	3/21/15	3/4/17	Scaffold	SC	SAMEA1025759	GCA_001106885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/885/GCA_001106885.1_6823_3_2	-	SMRU1898
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3537	65.6	-	CFJK01	85	4289	4052	3/15/15	3/11/17	Scaffold	SC	SAMEA1707225	GCA_001325025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/025/GCA_001325025.1_8939_3_35	-	2371D
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.92565	50.5	-	CYCF01	146	5227	4880	8/22/15	2/24/17	Contig	SC	SAMEA1466125	GCA_001277495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/495/GCA_001277495.1_7790_1_79	-	200456_aEPEC
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89606	52	-	MXGH01	95	4980	4679	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367968	GCA_002031305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/305/GCA_002031305.1_ASM203130v1	-	BCW_2161
Staphylococcus aureus VET1897R	1422736	PRJNA228829	228829	Terrabacteria group	Firmicutes	2.74744	32.8	-	JIGJ01	31	2841	2652	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404319	GCA_000646935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/935/GCA_000646935.1_Stap_aure_VET1897R_V1	-	VET1897R
Staphylococcus aureus VET1899R	1422738	PRJNA228831	228831	Terrabacteria group	Firmicutes	2.79609	32.9	-	JIGH01	46	2913	2733	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404321	GCA_000646955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/955/GCA_000646955.1_Stap_aure_VET1899R_V1	-	VET1899R
Salmonella enterica subsp. enterica serovar Ohio	117541	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.68686	52.1	-	MXGI01	824	5141	4392	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367967	GCA_002031325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/325/GCA_002031325.1_ASM203132v1	-	BCW_2160
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.27449	50.6	-	CXZT01	122	5610	5243	8/22/15	2/24/17	Contig	SC	SAMEA1466128	GCA_001277555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/555/GCA_001277555.1_7748_7_39	-	504647_aEPEC
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35305	65.6	-	CFNH01	87	4273	4054	3/15/15	3/11/17	Scaffold	SC	SAMEA1707230	GCA_001325045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/045/GCA_001325045.1_8939_3_66	-	type strain: 2362
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.06619	39.7	-	CRNJ01	69	2220	2017	3/23/15	3/4/17	Scaffold	SC	SAMEA1024558	GCA_001106905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/905/GCA_001106905.1_6755_4_12	-	SMRU1140
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12648	39.5	-	CKXG01	43	2367	2136	3/21/15	3/4/17	Scaffold	SC	SAMEA1025689	GCA_001106925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/925/GCA_001106925.1_6823_6_22	-	SMRU1990
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38059	65.6	-	CHCM01	65	4281	4081	4/21/15	3/11/17	Scaffold	SC	SAMEA1707239	GCA_001325065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/065/GCA_001325065.1_8939_3_65	-	2345A
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.17258	50.4	-	CYAG01	167	5610	5169	8/22/15	2/24/17	Contig	SC	SAMEA1466129	GCA_001277575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/575/GCA_001277575.1_7553_7_61	-	503311
Salmonella enterica subsp. enterica serovar Ohio	117541	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.6967	52.2	-	MXGJ01	46	4742	4503	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367966	GCA_002031335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/335/GCA_002031335.1_ASM203133v1	-	BCW_2159
Staphylococcus aureus VET1901R	1422739	PRJNA228832	228832	Terrabacteria group	Firmicutes	2.83027	32.9	-	JIGG01	31	2958	2776	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404322	GCA_000646975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/975/GCA_000646975.1_Stap_aure_VET1901R_V1	-	VET1901R
Staphylococcus aureus VET1904R	1422740	PRJNA228833	228833	Terrabacteria group	Firmicutes	2.84816	32.9	-	JIGF01	38	2974	2782	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404323	GCA_000646995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/646/995/GCA_000646995.1_Stap_aure_VET1904R_V1	-	VET1904R
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.6668	52.2	-	MXGK01	72	4763	4522	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367960	GCA_002031345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/345/GCA_002031345.1_ASM203134v1	-	N29359
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.98919	50.7	-	CXZK01	111	5208	4896	8/22/15	2/24/17	Contig	SC	SAMEA1466130	GCA_001277595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/595/GCA_001277595.1_7748_7_19	-	300795_aEPEC
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.40167	65.6	-	CIIZ01	77	4309	4085	4/21/15	3/11/17	Scaffold	SC	SAMEA1707240	GCA_001325085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/085/GCA_001325085.1_8987_5_35	-	2589Q
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.01669	39.7	-	CPLJ01	66	2194	1984	3/22/15	3/4/17	Scaffold	SC	SAMEA1020556	GCA_001106945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/945/GCA_001106945.1_6187_6_4	-	LMG1415
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	1.97436	39.7	-	CLQE01	42	2158	1949	3/21/15	3/4/17	Scaffold	SC	SAMEA1028873	GCA_001106965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/965/GCA_001106965.1_6949_3_3	-	SMRU2451
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35496	65.6	-	CFUY01	81	4273	4053	3/15/15	3/11/17	Scaffold	SC	SAMEA1707242	GCA_001325105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/105/GCA_001325105.1_8987_4_45	-	0539M
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.10928	50.5	-	CXZX01	140	5442	5020	8/22/15	2/24/17	Contig	SC	SAMEA1466134	GCA_001277675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/675/GCA_001277675.1_7748_7_1	-	100269_aEPEC
Salmonella enterica subsp. enterica serovar Senftenberg	28150	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.84493	52.1	-	MXGL01	67	4914	4667	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367959	GCA_002031375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/375/GCA_002031375.1_ASM203137v1	-	N29352
Staphylococcus aureus VET1905R	1422741	PRJNA228834	228834	Terrabacteria group	Firmicutes	2.84914	32.9	-	JIGE01	39	2984	2788	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404324	GCA_000647015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/015/GCA_000647015.1_Stap_aure_VET1905R_V1	-	VET1905R
Staphylococcus aureus VET1906R	1422742	PRJNA228835	228835	Terrabacteria group	Firmicutes	2.80686	32.9	-	JIGD01	46	2935	2747	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404325	GCA_000647035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/035/GCA_000647035.1_Stap_aure_VET1906R_V1	-	VET1906R
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.06721	52	-	MXGN01	103	5230	4960	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367953	GCA_002031405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/405/GCA_002031405.1_ASM203140v1	-	N29331
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.09164	50.5	-	CYAV01	277	5542	4970	8/22/15	2/24/17	Contig	SC	SAMEA1466135	GCA_001277695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/695/GCA_001277695.1_7748_7_33	-	503225_aEPEC
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35256	65.6	-	CHJF01	76	4273	4052	4/21/15	3/11/17	Scaffold	SC	SAMEA1707253	GCA_001325125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/125/GCA_001325125.1_8987_5_7	-	2533E
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.17489	39.5	-	CPKQ01	44	2413	2159	3/22/15	3/4/17	Scaffold	SC	SAMEA1020196	GCA_001107005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/005/GCA_001107005.1_6570_2_8	-	SPN13522
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12739	39.5	-	CKYF01	67	2347	2109	3/21/15	3/4/17	Scaffold	SC	SAMEA1026067	GCA_001107085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/085/GCA_001107085.1_6823_7_21	-	SMRU2013
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38638	65.6	-	CFUW01	75	4284	4096	3/15/15	3/11/17	Scaffold	SC	SAMEA1707263	GCA_001325145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/145/GCA_001325145.1_8898_8_24	-	2323B
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.74262	50.5	-	CXZH01	94	4958	4609	8/22/15	2/24/17	Contig	SC	SAMEA1466137	GCA_001277735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/735/GCA_001277735.1_7748_7_15	-	202973_aEPEC
Salmonella enterica subsp. enterica serovar Agona	58095	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.85778	52	-	MXGM01	117	4965	4685	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367954	GCA_002031425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/425/GCA_002031425.1_ASM203142v1	-	N29334
Staphylococcus aureus VET1908R	1422744	PRJNA228837	228837	Terrabacteria group	Firmicutes	2.76862	32.9	-	JIGB01	41	2877	2691	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404327	GCA_000647055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/055/GCA_000647055.1_Stap_aure_VET1908R_V1	-	VET1908R
Staphylococcus aureus VET1909R	1422745	PRJNA228838	228838	Terrabacteria group	Firmicutes	2.85145	32.9	-	JIGA01	38	2987	2796	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404328	GCA_000647075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/075/GCA_000647075.1_Stap_aure_VET1909R_V1	-	VET1909R
Salmonella enterica subsp. enterica serovar Agona	58095	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.88478	52	-	MXGO01	261	5163	4776	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367949	GCA_002031435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/435/GCA_002031435.1_ASM203143v1	-	N29318
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.81857	50.5	-	CYCG01	65	5073	4734	8/22/15	2/24/17	Contig	SC	SAMEA1466138	GCA_001277755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/755/GCA_001277755.1_7790_1_90	-	401174_aEPEC
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35089	65.6	-	CFUU01	80	4275	4057	3/15/15	3/11/17	Scaffold	SC	SAMEA1707278	GCA_001325165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/165/GCA_001325165.1_8939_3_64	-	2514J
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.20659	39.4	-	CKSW01	86	2441	2190	3/21/15	3/11/17	Scaffold	SC	SAMEA1026185	GCA_001107125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/125/GCA_001107125.1_6823_1_3	-	SMRU1851
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.24598	39.4	-	CLXM01	77	2472	2215	3/21/15	3/11/17	Scaffold	SC	SAMEA1029170	GCA_001107165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/165/GCA_001107165.1_6983_6_28	-	SMRU2332
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35086	65.6	-	CFVD01	71	4269	4065	3/15/15	3/11/17	Scaffold	SC	SAMEA1707279	GCA_001325185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/185/GCA_001325185.1_8939_3_12	-	2386V
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.3686	50.3	-	LGBC01	286	5808	5378	9/15/15	2/24/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN03785595	GCA_001281815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/815/GCA_001281815.1_ASM128181v1	26311863	STEC 1109
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7603	52.1	-	MXGP01	63	4845	4623	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367944	GCA_002031465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/465/GCA_002031465.1_ASM203146v1	-	N28730
Staphylococcus aureus VET1911R	1422747	PRJNA228840	228840	Terrabacteria group	Firmicutes	2.75889	32.8	-	JIFY01	35	2867	2681	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404330	GCA_000647095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/095/GCA_000647095.1_Stap_aure_VET1911R_V1	-	VET1911R
Staphylococcus aureus VET1912R	1422748	PRJNA228841	228841	Terrabacteria group	Firmicutes	2.76509	32.9	-	JIFX01	37	2867	2682	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404331	GCA_000647115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/115/GCA_000647115.1_Stap_aure_VET1912R_V1	-	VET1912R
Salmonella enterica subsp. enterica serovar Albany	211968	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83201	52.1	-	MXGQ01	327	5044	4623	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367943	GCA_002031475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/475/GCA_002031475.1_ASM203147v1	-	BCW_2135
Escherichia coli	562	PRJNA294505	294505	Proteobacteria	Gammaproteobacteria	4.76361	50.7	-	LJGE01	138	5004	4626	9/14/15	2/24/17	Contig	Robert Koch Institute	SAMN04026676	GCA_001282155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/155/GCA_001282155.1_ASM128215v1	-	IMT31351
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35791	65.6	-	CFRV01	84	4278	4049	3/15/15	3/11/17	Scaffold	SC	SAMEA1707284	GCA_001325205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/205/GCA_001325205.1_8987_4_47	-	0664Y
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.17013	39.6	-	CPMR01	251	2331	2131	3/23/15	3/11/17	Scaffold	SC	SAMEA682523	GCA_001107185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/185/GCA_001107185.1_5392_7_5	-	spnIC425
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.20503	39.5	-	CLFL01	104	2452	2211	3/21/15	3/11/17	Scaffold	SC	SAMEA1026038	GCA_001107245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/245/GCA_001107245.1_6899_7_6	-	SMRU2094
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34815	65.6	-	CHYE01	77	4264	4067	4/21/15	3/11/17	Scaffold	SC	SAMEA1707295	GCA_001325225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/225/GCA_001325225.1_8939_3_79	-	2501V
Escherichia coli	562	PRJNA294505	294505	Proteobacteria	Gammaproteobacteria	4.74869	50.7	-	LJGG01	152	4981	4616	9/14/15	2/24/17	Contig	Robert Koch Institute	SAMN04026678	GCA_001282195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/195/GCA_001282195.1_ASM128219v1	-	IMT31359
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.0208	51.9	-	MXGS01	168	5174	4803	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367941	GCA_002031485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/485/GCA_002031485.1_ASM203148v1	-	BCW_2133
Staphylococcus aureus VET1913R	1422749	PRJNA228842	228842	Terrabacteria group	Firmicutes	2.75489	32.8	-	JIFW01	27	2861	2681	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404332	GCA_000647135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/135/GCA_000647135.1_Stap_aure_VET1913R_V1	-	VET1913R
Staphylococcus aureus VET1914R	1422750	PRJNA228843	228843	Terrabacteria group	Firmicutes	2.76936	32.9	-	JIFV01	26	2861	2678	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404333	GCA_000647155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/155/GCA_000647155.1_Stap_aure_VET1914R_V1	-	VET1914R
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.96083	52.1	-	MXGU01	154	5164	4856	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367939	GCA_002031525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/525/GCA_002031525.1_ASM203152v1	-	BCW_2131
Escherichia coli	562	PRJNA294505	294505	Proteobacteria	Gammaproteobacteria	4.84466	50.6	-	LJGC01	157	5113	4712	9/14/15	2/24/17	Contig	Robert Koch Institute	SAMN04026673	GCA_001282215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/215/GCA_001282215.1_ASM128221v1	-	IMT28764
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35978	65.6	-	CHCO01	81	4282	4055	4/21/15	3/11/17	Scaffold	SC	SAMEA1707296	GCA_001325245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/245/GCA_001325245.1_8987_4_40	-	1355Z
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08677	39.6	-	CLIS01	63	2268	2011	3/21/15	3/11/17	Scaffold	SC	SAMEA1026102	GCA_001107285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/285/GCA_001107285.1_6925_6_7	-	SMRU2191
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.03593	39.7	-	CKOO01	61	2234	2029	3/21/15	3/11/17	Scaffold	SC	SAMEA1024618	GCA_001107325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/325/GCA_001107325.1_6680_4_22	-	19F
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34671	65.6	-	CFLZ01	96	4264	4062	3/15/15	3/11/17	Scaffold	SC	SAMEA1707300	GCA_001325265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/265/GCA_001325265.1_8898_8_30	-	2283H
Escherichia coli	562	PRJNA294505	294505	Proteobacteria	Gammaproteobacteria	4.82107	50.7	-	LJGB01	155	5060	4670	9/14/15	2/24/17	Contig	Robert Koch Institute	SAMN04026672	GCA_001282225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/225/GCA_001282225.1_ASM128222v1	-	IMT28707
Salmonella enterica subsp. enterica serovar Berta	28142	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89158	52.1	-	MXGV01	62	5035	4773	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367938	GCA_002031535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/535/GCA_002031535.1_ASM203153v1	-	BCW_2130
Staphylococcus aureus VET1917S	1422805	PRJNA228898	228898	Terrabacteria group	Firmicutes	2.76345	32.9	-	JIFT01	37	2884	2699	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404388	GCA_000647175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/175/GCA_000647175.1_Stap_aure_VET1917S_V1	-	VET1917S
Staphylococcus aureus VET1923S	1422807	PRJNA228900	228900	Terrabacteria group	Firmicutes	2.74951	32.9	-	JIFR01	44	2869	2684	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404390	GCA_000647195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/195/GCA_000647195.1_Stap_aure_VET1923S_V1	-	VET1923S
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.99247	52.1	-	MXHC01	256	5252	4847	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367928	GCA_002031565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/565/GCA_002031565.1_ASM203156v1	-	BCW_2120
Escherichia coli	562	PRJNA294505	294505	Proteobacteria	Gammaproteobacteria	4.84128	50.6	-	LJGF01	166	5122	4686	9/14/15	2/24/17	Contig	Robert Koch Institute	SAMN04026677	GCA_001282235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/235/GCA_001282235.1_ASM128223v1	-	IMT31352
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38505	65.6	-	CFNJ01	81	4292	4088	3/15/15	3/11/17	Scaffold	SC	SAMEA1707304	GCA_001325285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/285/GCA_001325285.1_8939_3_58	-	2361S
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.22979	39.4	-	CLCP01	110	2477	2226	3/21/15	3/11/17	Scaffold	SC	SAMEA1025788	GCA_001107365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/365/GCA_001107365.1_6899_4_14	-	SMRU2030
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.06076	39.5	-	CRHR01	65	2266	2050	3/22/15	3/11/17	Scaffold	SC	SAMEA1025260	GCA_001107385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/385/GCA_001107385.1_6736_7_8	-	SMRU1280
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34443	65.6	-	CFUR01	84	4259	4065	3/15/15	3/11/17	Scaffold	SC	SAMEA1707311	GCA_001325305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/305/GCA_001325305.1_8898_8_29	-	2252Z
Escherichia coli	562	PRJNA294505	294505	Proteobacteria	Gammaproteobacteria	4.71586	50.6	-	LJGD01	343	5016	4596	9/14/15	2/24/17	Contig	Robert Koch Institute	SAMN04026675	GCA_001282275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/275/GCA_001282275.1_ASM128227v1	-	IMT30467
"Salmonella enterica subsp. enterica serovar 6,7:lw:-"	1967637	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.68791	52.2	-	MXHE01	36	4728	4492	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367921	GCA_002031605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/605/GCA_002031605.1_ASM203160v1	-	BCW_2112
Staphylococcus aureus VET1949S	1422809	PRJNA228902	228902	Terrabacteria group	Firmicutes	2.74855	32.9	-	JIFQ01	32	2856	2672	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404392	GCA_000647215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/215/GCA_000647215.1_Stap_aure_VET1949S_V1	-	VET1949S
Staphylococcus aureus VET1950S	1422810	PRJNA228903	228903	Terrabacteria group	Firmicutes	2.68457	32.8	-	JIFP01	30	2752	2584	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404393	GCA_000647235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/235/GCA_000647235.1_Stap_aure_VET1950S_V1	-	VET1950S
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.09553	51.7	-	MXHD01	165	5232	4872	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367924	GCA_002031615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/615/GCA_002031615.1_ASM203161v1	-	BCW_2115
Escherichia coli	562	PRJNA294505	294505	Proteobacteria	Gammaproteobacteria	4.8294	50.6	-	LJGK01	179	5104	4683	9/14/15	2/24/17	Contig	Robert Koch Institute	SAMN04026682	GCA_001282295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/295/GCA_001282295.1_ASM128229v1	-	IMT33204
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36453	65.6	-	CFRT01	90	4295	4068	3/15/15	3/11/17	Scaffold	SC	SAMEA1707320	GCA_001325325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/325/GCA_001325325.1_8987_4_43	-	0322B
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.23035	39.5	-	CKCY01	63	2522	2291	3/21/15	3/11/17	Scaffold	SC	SAMEA1023827	GCA_001107425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/425/GCA_001107425.1_6593_5_7	-	15B
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09062	39.6	-	CKJG01	54	2306	2055	3/21/15	3/11/17	Scaffold	SC	SAMEA1023746	GCA_001107445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/445/GCA_001107445.1_6631_5_10	-	14
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35412	65.6	-	CHYF01	87	4271	4052	4/21/15	3/11/17	Scaffold	SC	SAMEA1707325	GCA_001325345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/345/GCA_001325345.1_8987_4_24	-	1325R
Escherichia coli	562	PRJNA294505	294505	Proteobacteria	Gammaproteobacteria	4.82374	50.6	-	LJGJ01	186	5086	4668	9/14/15	2/24/17	Contig	Robert Koch Institute	SAMN04026681	GCA_001282335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/335/GCA_001282335.1_ASM128233v1	-	IMT33181
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89928	52	-	MXHF01	388	5167	4709	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367916	GCA_002031635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/635/GCA_002031635.1_ASM203163v1	-	BCW_2106
Staphylococcus aureus VET1956S	1422812	PRJNA228905	228905	Terrabacteria group	Firmicutes	2.71051	32.8	-	JIFO01	23	2760	2607	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404395	GCA_000647255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/255/GCA_000647255.1_Stap_aure_VET1956S_V1	-	VET1956S
Staphylococcus aureus VET1959S	1422813	PRJNA228906	228906	Terrabacteria group	Firmicutes	2.72493	32.9	-	JIFN01	40	2821	2641	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02404396	GCA_000647275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/275/GCA_000647275.1_Stap_aure_VET1959S_V1	-	VET1959S
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.74932	52.2	-	MXHL01	611	5154	4551	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367908	GCA_002031705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/705/GCA_002031705.1_ASM203170v1	-	BCW_2098
Escherichia coli	562	PRJNA294505	294505	Proteobacteria	Gammaproteobacteria	4.83517	50.6	-	LJGH01	159	5107	4717	9/14/15	2/24/17	Contig	Robert Koch Institute	SAMN04026679	GCA_001282345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/345/GCA_001282345.1_ASM128234v1	-	IMT31487
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35577	65.6	-	CFNM01	86	4282	4057	3/15/15	3/11/17	Scaffold	SC	SAMEA1707331	GCA_001325365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/365/GCA_001325365.1_8987_4_26	-	0082Q
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12376	39.4	-	CMGZ01	41	2311	2077	3/22/15	3/10/17	Scaffold	SC	SAMEA1029284	GCA_001107465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/465/GCA_001107465.1_7038_5_2	-	SMRU2954
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14769	39.6	-	CKAP01	64	2421	2159	3/21/15	3/11/17	Scaffold	SC	SAMEA974705	GCA_001107485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/485/GCA_001107485.1_6259_6_24	-	23A
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35219	65.6	-	CGEU01	82	4270	4043	3/15/15	3/11/17	Scaffold	SC	SAMEA1707344	GCA_001325385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/385/GCA_001325385.1_8939_3_86	-	2489F
Escherichia coli	562	PRJNA294505	294505	Proteobacteria	Gammaproteobacteria	4.77717	50.7	-	LJGI01	164	5002	4625	9/14/15	2/24/17	Contig	Robert Koch Institute	SAMN04026680	GCA_001282375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/375/GCA_001282375.1_ASM128237v1	-	IMT33180
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.85238	52	-	MXHN01	181	4963	4630	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367903	GCA_002031745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/745/GCA_002031745.1_ASM203174v1	-	BCW_2093
Staphylococcus aureus ZTA09/03576-8HST	1413576	PRJNA226531	226531	Terrabacteria group	Firmicutes	2.85889	32.9	-	JIFM01	41	3003	2806	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02391403	GCA_000647295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/295/GCA_000647295.1_Stap_aure_ZTA09_03576-8HST_V1	-	ZTA09/03576-8HST
Staphylococcus aureus ZTA09/03734-9HSA	1413582	PRJNA226537	226537	Terrabacteria group	Firmicutes	2.71794	32.9	-	JIFK01	28	2817	2629	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02391409	GCA_000647315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/315/GCA_000647315.1_Stap_aure_ZTA09_03734-9HSA_V1	-	ZTA09/03734-9HSA
Salmonella enterica subsp. enterica serovar Senftenberg	28150	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.85297	52	-	MXGZ01	96	4946	4679	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367932	GCA_002031755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/755/GCA_002031755.1_ASM203175v1	-	BCW_2124
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.12702	50.6	-	CYAB01	144	5470	5121	8/22/15	2/24/17	Contig	SC	SAMEA1466102	GCA_001283145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/145/GCA_001283145.1_7748_7_13	-	202453_aEPEC
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35452	65.6	-	CFJL01	86	4268	4077	3/15/15	3/11/17	Scaffold	SC	SAMEA1707347	GCA_001325405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/405/GCA_001325405.1_8987_4_23	-	0659S
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.11817	39.6	-	CLJH01	74	2326	2074	3/21/15	3/11/17	Scaffold	SC	SAMEA1028749	GCA_001107625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/625/GCA_001107625.1_6925_7_7	-	SMRU2503
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.0403	39.6	-	CLEQ01	45	2245	2033	3/21/15	3/10/17	Scaffold	SC	SAMEA1025774	GCA_001107685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/685/GCA_001107685.1_6899_6_22	-	SMRU2086
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35287	65.6	-	CIET01	89	4281	4064	4/21/15	3/11/17	Scaffold	SC	SAMEA1707356	GCA_001325445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/445/GCA_001325445.1_8987_4_10	-	0076J
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.04965	50.6	-	CYEQ01	118	5360	4994	8/24/15	2/24/17	Contig	SC	SAMEA1531037	GCA_001283285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/285/GCA_001283285.1_8205_3_51	-	302082
"Salmonella enterica subsp. enterica serovar 6,7:k:-"	1192779	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70963	52.2	-	MXHO01	54	4780	4547	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367902	GCA_002031785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/785/GCA_002031785.1_ASM203178v1	-	BCW_2092
Staphylococcus aureus ZTA09/03745-9HSA	1413584	PRJNA226539	226539	Terrabacteria group	Firmicutes	2.74603	32.9	-	JIFI01	38	2853	2669	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02391411	GCA_000647335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/335/GCA_000647335.1_Stap_aure_ZTA09_03745-9HSA_V1	-	ZTA09/03745-9HSA
Staphylococcus aureus ZTA10/00045-9HST	1413570	PRJNA226525	226525	Terrabacteria group	Firmicutes	2.7611	32.8	-	JIFH01	34	2875	2678	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02391397	GCA_000647355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/355/GCA_000647355.1_Stap_aure_ZTA10_00045-9HST_V1	-	ZTA10/00045-9HST
"Salmonella enterica subsp. arizonae serovar 18:z4,z23:-"	1192839	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.48787	51.4	-	MXHQ01	65	4531	4101	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367898	GCA_002031795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/795/GCA_002031795.1_ASM203179v1	-	BCW_2088
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.08641	50.5	-	CYCS01	121	5417	5063	8/22/15	2/24/17	Contig	SC	SAMEA1466160	GCA_001283365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/365/GCA_001283365.1_7790_1_96	-	503130_aEPEC
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35051	65.6	-	CHIZ01	77	4265	4063	4/21/15	3/11/17	Scaffold	SC	SAMEA1707366	GCA_001325465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/465/GCA_001325465.1_8898_8_11	-	2198Q
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.99782	39.7	-	CKNF01	61	2202	1951	3/21/15	3/11/17	Scaffold	SC	SAMEA1024136	GCA_001107725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/725/GCA_001107725.1_6649_8_6	-	3
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.13477	39.6	-	CKPU01	57	2397	2144	3/21/15	3/11/17	Scaffold	SC	SAMEA1024543	GCA_001107905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/905/GCA_001107905.1_6680_5_20	-	SMRU932
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35401	65.6	-	CFKE01	82	4275	4062	3/15/15	3/11/17	Scaffold	SC	SAMEA1707373	GCA_001325485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/485/GCA_001325485.1_8939_3_70	-	2487E
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.35903	50.4	-	CYCB01	269	5892	5393	8/22/15	2/24/17	Contig	SC	SAMEA1466156	GCA_001283405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/405/GCA_001283405.1_7790_1_65	-	402977
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.64291	52.3	-	MXHS01	71	4680	4448	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367896	GCA_002031825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/825/GCA_002031825.1_ASM203182v1	-	BCW_2086
Staphylococcus aureus ZTA10/00047-8HST	1413574	PRJNA226529	226529	Terrabacteria group	Firmicutes	2.77502	32.9	-	JIFG01	41	2876	2681	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02391401	GCA_000647375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/375/GCA_000647375.1_Stap_aure_ZTA10_00047-8HST_V1	-	ZTA10/00047-8HST
Staphylococcus aureus ZTA10/00058-8HST	1413572	PRJNA226527	226527	Terrabacteria group	Firmicutes	2.76158	32.8	-	JIFF01	35	2872	2680	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02391399	GCA_000647395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/395/GCA_000647395.1_Stap_aure_ZTA10_00058-8HST_V1	-	ZTA10/00058-8HST
Salmonella enterica subsp. enterica serovar Derby	28144	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.79219	52	-	MXHV01	113	4887	4609	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367893	GCA_002031835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/835/GCA_002031835.1_ASM203183v1	-	BCW_2083
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.09159	50.6	-	CYDB01	195	5457	5055	8/22/15	2/24/17	Contig	SC	SAMEA1466201	GCA_001283425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/425/GCA_001283425.1_7790_1_95	-	500197_aEPEC
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35224	65.6	-	CFNE01	90	4278	4063	3/15/15	3/11/17	Scaffold	SC	SAMEA1707377	GCA_001325505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/505/GCA_001325505.1_8898_8_3	-	2195M
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.17841	39.5	-	CPRE01	238	2379	2165	3/23/15	3/11/17	Scaffold	SC	SAMEA682307	GCA_001107925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/925/GCA_001107925.1_5392_5_9	-	spnIC51
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.1279	39.8	-	CLSR01	58	2359	2140	3/21/15	3/11/17	Scaffold	SC	SAMEA1028881	GCA_001107965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/965/GCA_001107965.1_6972_4_11	-	SMRU2603
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34346	65.6	-	CFRY01	91	4267	4059	3/15/15	3/11/17	Scaffold	SC	SAMEA1707384	GCA_001325525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/525/GCA_001325525.1_8987_4_14	-	0603G
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.22087	50.6	-	CYFN01	259	5631	5175	8/24/15	2/24/17	Contig	SC	SAMEA1531019	GCA_001283445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/445/GCA_001283445.1_8205_3_67	-	700149
Salmonella enterica subsp. enterica serovar Agona	58095	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.76371	52	-	MXHW01	70	4824	4582	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367889	GCA_002031865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/865/GCA_002031865.1_ASM203186v1	-	BCW_2079
Staphylococcus aureus ZTA10/02412-8HSA	1413581	PRJNA226536	226536	Terrabacteria group	Firmicutes	2.78029	32.9	-	JIFE01	38	2910	2728	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02391408	GCA_000647415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/415/GCA_000647415.1_Stap_aure_ZTA10_02412-8HSA_V1	-	ZTA10/02412-8HSA
Staphylococcus aureus ZTA11/00189-8HSA	1413585	PRJNA226540	226540	Terrabacteria group	Firmicutes	2.8161	32.9	-	JIFD01	44	2954	2753	4/22/14	3/3/17	Scaffold	Broad Institute	SAMN02391412	GCA_000647435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/435/GCA_000647435.1_Stap_aure_ZTA11_00189-8HSA_V1	-	ZTA11/00189-8HSA
Salmonella enterica subsp. enterica serovar Albert	1967643	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.14196	52.1	-	MXHX01	126	5395	5104	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367887	GCA_002031875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/875/GCA_002031875.1_ASM203187v1	-	BCW_2077
Escherichia coli	562	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	5.04557	50.6	-	CYFW01	84	5332	5001	8/24/15	2/24/17	Contig	SC	SAMEA1527954	GCA_001283465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/465/GCA_001283465.1_8205_8_73	-	G401436
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38995	65.6	-	CFVF01	88	4292	4083	3/15/15	3/11/17	Scaffold	SC	SAMEA1707394	GCA_001325545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/545/GCA_001325545.1_8987_4_61	-	type strain: 0545
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14729	39.6	-	CKFK01	87	2343	2093	3/21/15	3/11/17	Scaffold	SC	SAMEA1024070	GCA_001108045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/045/GCA_001108045.1_6630_3_2	-	6B
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07845	39.5	-	CRHV01	44	2302	2065	3/22/15	3/11/17	Scaffold	SC	SAMEA1025336	GCA_001108065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/065/GCA_001108065.1_6736_8_12	-	SMRU1308
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35163	65.6	-	CHJD01	80	4273	4071	4/21/15	3/11/17	Scaffold	SC	SAMEA1707401	GCA_001325565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/565/GCA_001325565.1_8987_4_87	-	0693E
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.22543	50.7	-	CYCX01	232	5716	5197	8/22/15	2/24/17	Contig	SC	SAMEA1466166	GCA_001283485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/485/GCA_001283485.1_7790_1_83	-	201589_aEPEC
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.67375	52.2	-	MXIA01	50	4710	4498	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367882	GCA_002031905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/905/GCA_002031905.1_ASM203190v1	-	BCW_2071
Staphylococcus aureus 880	1268883	PRJNA183704	183704	Terrabacteria group	Firmicutes	2.90878	32.6508	plasmid pHMPREF1625_1:NZ_CM002749.1/CM002749.1; plasmid pHMPREF1625_2:NZ_CM002750.1/CM002750.1; plasmid pHMPREF1625_3:NZ_KK240934.2/KK240934.2	JICL01	31	3076	2891	4/23/14	3/4/17	Scaffold	Washington University	SAMN02732485	GCA_000647855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/855/GCA_000647855.2_ASM64785v2	-	880
Staphylococcus aureus subsp. aureus	46170	PRJEB5717	248809	Terrabacteria group	Firmicutes	3.00217	32.9	-	CCCM01	90	3209	3030	5/27/14	3/4/17	Scaffold	NATIONALCENTERFORGENOMERESOURCES	SAMEA3139043	GCA_000723705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/705/GCA_000723705.1_MM66	-	MM66
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.92187	52.2	-	MXHZ01	60	5017	4794	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367884	GCA_002031925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/925/GCA_002031925.1_ASM203192v1	-	BCW_2073
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.09668	50.5	-	CYDP01	135	5433	5079	8/22/15	2/24/17	Contig	SC	SAMEA1531042	GCA_001283505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/505/GCA_001283505.1_8205_3_24	-	505545
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.31445	65.6	-	CHYA01	72	4238	4042	4/21/15	3/11/17	Scaffold	SC	SAMEA1707403	GCA_001325585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/585/GCA_001325585.1_8898_8_61	-	2271V
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09213	39.6	-	CKGA01	65	2304	2052	3/21/15	3/15/17	Scaffold	SC	SAMEA1024056	GCA_001108085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/085/GCA_001108085.1_6630_4_18	-	14
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.04403	39.8	-	CKXH01	68	2264	2044	3/21/15	3/4/17	Scaffold	SC	SAMEA1026209	GCA_001108105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/105/GCA_001108105.1_6823_6_18	-	SMRU1986
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37699	65.6	-	CFUZ01	77	4305	4067	3/15/15	3/11/17	Scaffold	SC	SAMEA1707427	GCA_001325605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/605/GCA_001325605.1_8987_5_2	-	2525W
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.21535	50.5	-	CXZY01	143	5633	5244	8/22/15	2/24/17	Contig	SC	SAMEA1466193	GCA_001283525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/525/GCA_001283525.1_7553_7_69	-	204263_aEPEC
Salmonella enterica subsp. enterica serovar Berta	28142	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.91211	52.2	-	MXIE01	648	5353	4700	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367878	GCA_002031935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/935/GCA_002031935.1_ASM203193v1	-	BCW_2066
Staphylococcus aureus subsp. aureus SK1585	1274985	PRJNA178070	178070	Terrabacteria group	Firmicutes	2.85921	33	-	AYLT01	29	2876	2706	7/29/14	3/4/17	Scaffold	University of Queensland	SAMN01938902	GCA_000735755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/755/GCA_000735755.1_SK1585_newbler2.6_V1	-	SK1585
Staphylococcus aureus	1280	PRJNA244352	244352	Terrabacteria group	Firmicutes	2.92911	32.9	-	JOVN01	2	3124	2934	8/25/14	3/4/17	Scaffold	Los Alamos National Laboratory	SAMN02873989	GCA_000743415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/743/415/GCA_000743415.1_SAQ	25278527	CDC 73-57501
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.94162	52.1	-	MXIG01	73	5067	4816	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367876	GCA_002031955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/955/GCA_002031955.1_ASM203195v1	-	BCW_2064
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.94939	50.6	-	CYFM01	99	5249	4900	8/24/15	2/24/17	Contig	SC	SAMEA1531045	GCA_001283585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/585/GCA_001283585.1_8205_3_77	-	G503854
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36585	65.6	-	CGER01	81	4276	4076	3/15/15	3/11/17	Scaffold	SC	SAMEA1707442	GCA_001325645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/645/GCA_001325645.1_8939_3_40	-	2511F
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.06523	39.8	-	CPTO01	110	2245	2041	3/23/15	3/4/17	Scaffold	SC	SAMEA1020564	GCA_001108185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/185/GCA_001108185.1_5789_2_10	-	LMG1048
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.02032	39.7	-	CKEQ01	78	2230	2012	3/21/15	3/4/17	Scaffold	SC	SAMEA1024179	GCA_001108205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/205/GCA_001108205.1_6630_2_9	-	11A
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36426	65.6	-	CFND01	61	4275	4080	3/15/15	3/11/17	Scaffold	SC	SAMEA1707448	GCA_001325665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/665/GCA_001325665.1_8898_8_94	-	2298Z
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.0529	50.6	-	CYAS01	226	5379	4927	8/22/15	2/24/17	Contig	SC	SAMEA1466189	GCA_001283645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/645/GCA_001283645.1_7748_7_10	-	201534_aEPEC
"Salmonella enterica subsp. arizonae serovar 18:z4,z23:-"	1192839	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.98119	51.9	-	MXIH01	269	5121	4769	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367871	GCA_002031985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/985/GCA_002031985.1_ASM203198v1	-	N23850
Staphylococcus aureus subsp. aureus	46170	PRJNA268588	268588	Terrabacteria group	Firmicutes	2.76396	32.7	-	JTJK01	2	2885	2691	12/1/14	3/4/17	Scaffold	University of Rennes 1	SAMN03222810	GCA_000788115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/788/115/GCA_000788115.1_ASM78811v1	25676774	UAMS-1
Staphylococcus aureus 917	1338533	PRJNA265867	265867	Terrabacteria group	Firmicutes	2.78798	32.6	-	JXBU01	52	2896	2760	1/7/15	3/4/17	Scaffold	The Genome Institute	SAMN03160716	GCA_000816715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/816/715/GCA_000816715.1_ASM81671v1	-	917
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.71539	52.2	-	MXIJ01	239	4870	4551	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367869	GCA_002031995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/995/GCA_002031995.1_ASM203199v1	-	BCW_2057
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.73659	50.5	-	CYBX01	101	5005	4639	8/22/15	2/24/17	Contig	SC	SAMEA1466181	GCA_001283665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/665/GCA_001283665.1_7790_1_75	-	102010_aEPEC
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38493	65.6	-	CFRO01	81	4304	4095	3/15/15	3/11/17	Scaffold	SC	SAMEA1707452	GCA_001325685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/685/GCA_001325685.1_8939_3_39	-	2495N
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.03806	39.6	-	CRSQ01	47	2230	2026	3/22/15	3/4/17	Scaffold	SC	SAMEA1025453	GCA_001108225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/225/GCA_001108225.1_6805_3_15	-	SMRU1455
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.2132	39.5	-	CPOA01	80	2464	2205	3/23/15	3/4/17	Scaffold	SC	SAMEA1408336	GCA_001108245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/245/GCA_001108245.1_7444_8_49	-	0012+25031
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35111	65.6	-	CHCK01	83	4270	4073	4/21/15	3/11/17	Scaffold	SC	SAMEA1707455	GCA_001325705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/705/GCA_001325705.1_8898_8_54	-	2290Q
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.87446	50.8	-	CYAD01	163	5237	4809	8/22/15	2/24/17	Contig	SC	SAMEA1466171	GCA_001283705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/705/GCA_001283705.1_7748_7_16	-	204302_aEPEC
"Salmonella enterica subsp. arizonae serovar 18:z4,z23:-"	1192839	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.56396	51.5	-	MXIK01	102	4610	4131	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367868	GCA_002032005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/005/GCA_002032005.1_ASM203200v1	-	BCW_2056
Staphylococcus aureus subsp. aureus	46170	PRJDB2959	272787	Terrabacteria group	Firmicutes	2.89034	33.3	-	BBJA01	2	2917	2759	1/14/15	3/4/17	Scaffold	"Department of Infection Control Science, Faculty of Medicine, Juntendo University"	SAMD00018594	GCA_000829795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/795/GCA_000829795.1_ASM82979v1	-	M2
Staphylococcus aureus subsp. aureus	46170	PRJNA286954	286954	Terrabacteria group	Firmicutes	2.71481	32.9	-	LFOJ01	15	2824	2666	7/17/15	3/4/17	Scaffold	Tobacco research institute	SAMN03774725	GCA_001078665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/665/GCA_001078665.1_ASM107866v1	-	PX03
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.8235	52.2	-	MXIL01	85	4943	4714	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367867	GCA_002032025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/025/GCA_002032025.1_ASM203202v1	-	BCW_2055
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.09889	50.5	-	CYBI01	154	5435	5008	8/22/15	2/24/17	Contig	SC	SAMEA1466178	GCA_001283725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/725/GCA_001283725.1_7748_7_9	-	201214_aEPEC
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35586	65.6	-	CFNI01	64	4259	4071	3/15/15	3/11/17	Scaffold	SC	SAMEA1707458	GCA_001325725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/725/GCA_001325725.1_8939_3_42	-	2358P
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.16669	39.6	-	CKMS01	57	2384	2109	3/21/15	3/15/17	Scaffold	SC	SAMEA1024166	GCA_001108305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/305/GCA_001108305.1_6649_8_23	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.11623	39.7	-	CMUG01	143	2246	1998	3/23/15	3/4/17	Scaffold	SC	SAMEA1022842	GCA_001108345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/345/GCA_001108345.1_5737_6_2	-	142
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35646	65.6	-	CFVA01	83	4284	4060	3/15/15	3/11/17	Scaffold	SC	SAMEA1707468	GCA_001325745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/745/GCA_001325745.1_8939_3_92	-	2405Q
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.14991	50.6	-	CYFO01	143	5516	5139	8/24/15	2/24/17	Contig	SC	SAMEA1531022	GCA_001283745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/745/GCA_001283745.1_8205_3_76	-	G500007
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.9527	52	-	MXIM01	68	5118	4882	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367866	GCA_002032065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/065/GCA_002032065.1_ASM203206v1	-	BCW_2054
Staphylococcus aureus	1280	PRJNA285410	285410	Terrabacteria group	Firmicutes	2.85985	32.6	-	LDVC01	135	3021	2860	8/31/15	3/5/17	Scaffold	University of Queensland	SAMN03753597	GCA_001275825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/825/GCA_001275825.1_ASM127582v1	-	A1
Staphylococcus aureus	1280	PRJNA285410	285410	Terrabacteria group	Firmicutes	2.73156	32.7	-	LDVD01	141	2842	2708	8/31/15	3/5/17	Scaffold	University of Queensland	SAMN03753598	GCA_001275905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/905/GCA_001275905.1_ASM127590v1	-	A3
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7329	52.1	-	MXIO01	518	5050	4535	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367864	GCA_002032075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/075/GCA_002032075.1_ASM203207v1	-	BCW_2052
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.9151	50.5	-	CXZV01	145	5270	4870	8/22/15	2/24/17	Contig	SC	SAMEA1466190	GCA_001283825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/825/GCA_001283825.1_7748_7_25	-	403128
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35565	65.6	-	CGEN01	83	4282	4051	3/15/15	3/11/17	Scaffold	SC	SAMEA1707475	GCA_001325765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/765/GCA_001325765.1_8939_3_94	-	2490H
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12861	39.3	-	CLDJ01	77	2321	2094	3/21/15	3/4/17	Scaffold	SC	SAMEA1026070	GCA_001108405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/405/GCA_001108405.1_6899_5_11	-	SMRU2051
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.22669	39.5	-	CPMA01	84	2465	2211	3/23/15	3/4/17	Scaffold	SC	SAMEA1408298	GCA_001108445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/445/GCA_001108445.1_7444_8_4	-	9602+15128
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35029	65.6	-	CFUQ01	80	4271	4054	3/15/15	3/11/17	Scaffold	SC	SAMEA1707484	GCA_001325785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/785/GCA_001325785.1_8939_3_21	-	2414A
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.27069	50.4	-	CYBW01	120	5617	5178	8/22/15	2/24/17	Contig	SC	SAMEA1466105	GCA_001283845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/845/GCA_001283845.1_7790_1_73	-	702898_aEPEC
Salmonella enterica subsp. enterica serovar Derby	28144	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83591	51.9	-	MXIN01	85	4950	4688	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367865	GCA_002032085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/085/GCA_002032085.1_ASM203208v1	-	BCW_2053
Staphylococcus aureus	1280	PRJNA285410	285410	Terrabacteria group	Firmicutes	2.73075	32.7	-	LDVE01	116	2835	2710	8/31/15	3/5/17	Scaffold	University of Queensland	SAMN03753599	GCA_001275925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/925/GCA_001275925.1_ASM127592v1	-	A4
Staphylococcus aureus	1280	PRJNA285410	285410	Terrabacteria group	Firmicutes	2.73263	32.7	-	LDVF01	135	2840	2706	8/31/15	3/5/17	Scaffold	University of Queensland	SAMN03753624	GCA_001275945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/945/GCA_001275945.1_ASM127594v1	-	A5
"Salmonella enterica subsp. enterica serovar 4,[5],12:r:-"	1192775	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.86867	52.2	-	MXIP01	65	4998	4763	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367863	GCA_002032095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/095/GCA_002032095.1_ASM203209v1	-	BCW_2051
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.67935	50.7	-	CYDW01	33	4865	4584	8/22/15	2/24/17	Contig	SC	SAMEA1531001	GCA_001283865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/865/GCA_001283865.1_8205_3_32	-	401363
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35238	65.6	-	CIEK01	86	4265	4049	4/21/15	3/11/17	Scaffold	SC	SAMEA1707486	GCA_001325805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/805/GCA_001325805.1_8939_3_55	-	2498R
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12693	39.6	-	CKQI01	60	2345	2121	3/21/15	3/4/17	Scaffold	SC	SAMEA1024927	GCA_001108465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/465/GCA_001108465.1_6680_6_14	-	SMRU950
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.02296	39.8	-	CLQA01	67	2231	1987	3/21/15	3/4/17	Scaffold	SC	SAMEA1029124	GCA_001108485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/485/GCA_001108485.1_6949_4_15	-	15B
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35455	65.6	-	CHXZ01	78	4278	4049	4/21/15	3/11/17	Scaffold	SC	SAMEA1707490	GCA_001325825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/825/GCA_001325825.1_8939_3_22	-	2481Y
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.88591	50.6	-	CXZP01	122	5157	4824	8/22/15	2/24/17	Contig	SC	SAMEA1466170	GCA_001283885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/885/GCA_001283885.1_7748_7_18	-	300711_aEPEC
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.63635	52.3	-	MXIR01	56	4679	4454	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367861	GCA_002032145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/145/GCA_002032145.1_ASM203214v1	-	BCW_2049
Staphylococcus aureus	1280	PRJNA285410	285410	Terrabacteria group	Firmicutes	2.71346	32.7	-	LDVG01	92	2842	2698	8/31/15	3/5/17	Scaffold	University of Queensland	SAMN03753625	GCA_001275955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/955/GCA_001275955.1_ASM127595v1	-	B6
Staphylococcus aureus	1280	PRJNA285410	285410	Terrabacteria group	Firmicutes	2.70436	32.6	-	LDVH01	127	2793	2653	8/31/15	3/5/17	Scaffold	University of Queensland	SAMN03753626	GCA_001275985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/985/GCA_001275985.1_ASM127598v1	-	C9
Salmonella enterica subsp. enterica serovar Oranienburg	28147	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7458	52	-	MXIT01	45	4782	4541	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367859	GCA_002032155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/155/GCA_002032155.1_ASM203215v1	-	BCW_2047
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.11083	50.6	-	CYAK01	187	5483	5108	8/22/15	2/24/17	Contig	SC	SAMEA1466142	GCA_001283925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/925/GCA_001283925.1_7748_7_31	-	501029_aEPEC
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37029	65.6	-	CFKV01	70	4280	4056	3/15/15	3/11/17	Scaffold	SC	SAMEA1707500	GCA_001325845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/845/GCA_001325845.1_8898_8_36	-	2227X
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10039	39.4	-	CKIS01	65	2311	2081	3/21/15	3/4/17	Scaffold	SC	SAMEA1024018	GCA_001108505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/505/GCA_001108505.1_6631_4_20	-	20
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.24927	39.4	-	CKDP01	120	2482	2222	3/21/15	3/4/17	Scaffold	SC	SAMEA1023993	GCA_001108585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/585/GCA_001108585.1_6630_1_15	-	6B
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3578	65.6	-	CIJE01	92	4292	4057	4/21/15	3/11/17	Scaffold	SC	SAMEA1707502	GCA_001325865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/865/GCA_001325865.1_8987_4_82	-	0111X
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.12944	50.6	-	CYER01	145	5457	5098	8/24/15	2/24/17	Contig	SC	SAMEA1531041	GCA_001283965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/965/GCA_001283965.1_8205_3_5	-	202374
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.11949	52	-	MXIQ01	104	5304	5020	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367862	GCA_002032165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/165/GCA_002032165.1_ASM203216v1	-	BCW_2050
Staphylococcus aureus	1280	PRJNA269675	269675	Terrabacteria group	Firmicutes	2.77829	32.7	-	LJBM01	59	2899	2749	9/21/15	3/5/17	Scaffold	SRCAMB	SAMN04018805	GCA_001295205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/205/GCA_001295205.1_ASM129520v1	26941146	SCPM-O-B-7777
Staphylococcus aureus	1280	PRJNA269675	269675	Terrabacteria group	Firmicutes	2.70547	32.7	-	LJBL01	71	2836	2638	9/21/15	3/5/17	Scaffold	SRCAMB	SAMN04018804	GCA_001295215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/215/GCA_001295215.1_ASM129521v1	26941146	SCPM-O-B-7774
"Salmonella enterica subsp. enterica serovar 4,12:d:-"	1620418	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.06457	51.6	-	MXIU01	115	5185	4900	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367858	GCA_002032195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/195/GCA_002032195.1_ASM203219v1	-	BCW_2046
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.16976	50.5	-	CYBL01	159	5531	5153	8/22/15	2/24/17	Contig	SC	SAMEA1466175	GCA_001284025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/025/GCA_001284025.1_7790_1_52	-	400549_aEPEC
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34921	65.6	-	CIEH01	89	4270	4054	4/21/15	3/11/17	Scaffold	SC	SAMEA1707511	GCA_001325885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/885/GCA_001325885.1_8898_8_33	-	1532R
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21477	39.5	-	CPOC01	98	2432	2207	3/23/15	3/4/17	Scaffold	SC	SAMEA1408324	GCA_001108645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/645/GCA_001108645.1_7444_8_20	-	9711+04135
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.13078	39.6	-	CJZP01	88	2353	2091	3/21/15	3/11/17	Scaffold	SC	SAMEA974683	GCA_001108705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/705/GCA_001108705.1_6259_5_16	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35641	65.6	-	CHYJ01	75	4272	4057	4/21/15	3/11/17	Scaffold	SC	SAMEA1707520	GCA_001325905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/905/GCA_001325905.1_8898_8_34	-	2174P
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.19126	50.5	-	CXZS01	123	5589	5195	8/22/15	2/24/17	Contig	SC	SAMEA1466097	GCA_001284085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/085/GCA_001284085.1_7553_7_70	-	402138_aEPEC
"Salmonella enterica subsp. enterica serovar 4,[5],12:i:-"	440524	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.87679	52.2	-	MXIV01	280	5106	4736	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367857	GCA_002032225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/225/GCA_002032225.1_ASM203222v1	-	BCW_2045
Staphylococcus aureus	1280	PRJNA269675	269675	Terrabacteria group	Firmicutes	2.77706	32.7	-	LJBK01	79	2907	2753	9/21/15	3/5/17	Scaffold	SRCAMB	SAMN04018802	GCA_001295225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/225/GCA_001295225.1_ASM129522v1	26941146	SCPM-O-B-7772
Staphylococcus aureus M1	1305598	PRJNA290993	290993	Terrabacteria group	Firmicutes	2.83402	32.9	-	LIDQ01	7	2946	2733	10/23/15	3/5/17	Scaffold	Ningxia medical university general hospital	SAMN03938517	GCA_001412275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/275/GCA_001412275.1_ASM141227v1	-	M1
"Salmonella enterica subsp. enterica serovar 4,[5],12:i:-"	440524	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.88874	52.2	-	MXIW01	162	5020	4776	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367856	GCA_002032235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/235/GCA_002032235.1_ASM203223v1	-	BCW_2044
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.18055	50.6	-	CYDT01	128	5557	5196	8/22/15	2/24/17	Contig	SC	SAMEA1531008	GCA_001284125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/125/GCA_001284125.1_8205_3_28	-	702566
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3578	65.6	-	CFVC01	63	4271	4057	3/15/15	3/11/17	Scaffold	SC	SAMEA1707521	GCA_001325925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/925/GCA_001325925.1_8987_4_79	-	0678N
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.15129	39.8	-	CLGK01	56	2392	2162	3/21/15	3/11/17	Scaffold	SC	SAMEA1026117	GCA_001108965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/965/GCA_001108965.1_6925_4_10	-	SMRU2146
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.24154	39.5	-	CKAB01	76	2450	2185	3/21/15	3/10/17	Scaffold	SC	SAMEA974688	GCA_001108985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/985/GCA_001108985.1_6259_5_8	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35281	65.6	-	CIIW01	79	4268	4072	4/21/15	3/11/17	Scaffold	SC	SAMEA1707523	GCA_001325945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/945/GCA_001325945.1_8939_3_26	-	2356M
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.99914	50.6	-	CYFC01	77	5231	4923	8/24/15	2/24/17	Contig	SC	SAMEA1531010	GCA_001284185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/185/GCA_001284185.1_8205_3_69	-	201350
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.85256	52.3	-	MXIX01	87	4980	4716	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367854	GCA_002032265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/265/GCA_002032265.1_ASM203226v1	-	BCW_2042
Staphylococcus aureus	1280	PRJNA272103	272103	Terrabacteria group	Firmicutes	2.76173	32.6	-	LRQH01	103	2877	2713	2/2/16	3/5/17	Scaffold	The Genome Institute at Washington University	SAMN03948579	GCA_001546605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/605/GCA_001546605.1_ASM154660v1	-	PSS7673
Staphylococcus aureus	1280	PRJNA320521	320521	Terrabacteria group	Firmicutes	2.98924	32.9	-	LXNN01	166	3147	2974	5/11/16	3/6/17	Scaffold	University of Colorado - Boulder	SAMN04942525	GCA_001642105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/105/GCA_001642105.1_ASM164210v1	-	CU072914
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.86029	52.1	-	MXIY01	268	5040	4665	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367853	GCA_002032275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/275/GCA_002032275.1_ASM203227v1	-	BCW_2040
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.09695	50.5	-	CYAC01	162	5442	5044	8/22/15	2/24/17	Contig	SC	SAMEA1466111	GCA_001284205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/205/GCA_001284205.1_7748_7_12	-	202443_aEPEC
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35671	65.6	-	CFUX01	76	4278	4065	3/15/15	3/11/17	Scaffold	SC	SAMEA1707536	GCA_001325965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/965/GCA_001325965.1_8898_8_42	-	2175Q
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04209	39.6	-	CKFC01	89	2283	2044	3/21/15	3/10/17	Scaffold	SC	SAMEA1024003	GCA_001109105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/105/GCA_001109105.1_6630_3_15	-	35F
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.05275	39.8	-	CKFW01	102	2260	2023	3/21/15	3/14/17	Scaffold	SC	SAMEA1023801	GCA_001109125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/125/GCA_001109125.1_6630_4_15	-	34
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37567	65.6	-	CFUS01	75	4280	4079	3/15/15	3/11/17	Scaffold	SC	SAMEA1707540	GCA_001325985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/325/985/GCA_001325985.1_8898_8_19	-	2199R
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.1202	50.5	-	CYBQ01	171	5446	5017	8/22/15	2/24/17	Contig	SC	SAMEA1466155	GCA_001284265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/265/GCA_001284265.1_7790_1_57	-	401250_aEPEC
Salmonella enterica subsp. enterica serovar Worthington	1160769	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.17786	51.8	-	MXJB01	90	5312	5023	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367850	GCA_002032305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/305/GCA_002032305.1_ASM203230v1	-	BCW_2037
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.93726	32.8	-	LKYU01	178	3205	2910	1/5/17	3/6/17	Scaffold	USDA-ARS	SAMN03893338	GCA_001936695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/695/GCA_001936695.1_UCI03_v1.0	-	ST5:UCI 3
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.65586	32.8	-	LKZA01	109	2879	2655	1/5/17	3/6/17	Scaffold	USDA-ARS	SAMN03893344	GCA_001936705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/705/GCA_001936705.1_UCI09_v1.0	-	ST5:UCI 9
Salmonella enterica subsp. enterica serovar Alachua	913240	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80479	52.2	-	MXJE01	52	4888	4623	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367847	GCA_002032315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/315/GCA_002032315.1_ASM203231v1	-	BCW_2034
Escherichia coli	562	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	5.4151	50.2	-	CYGA01	121	5774	5335	8/24/15	2/24/17	Contig	SC	SAMEA1528003	GCA_001284285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/285/GCA_001284285.1_8205_8_81	-	G702074-2
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35138	65.6	-	CHCJ01	65	4269	4060	4/21/15	3/11/17	Scaffold	SC	SAMEA1707542	GCA_001326005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/005/GCA_001326005.1_8898_8_38	-	2286L
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.24767	39.4	-	CMBN01	85	2464	2215	3/21/15	3/11/17	Scaffold	SC	SAMEA1029430	GCA_001109145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/145/GCA_001109145.1_7004_7_52	-	SMRU2884
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21017	39.5	-	CPRT01	133	2451	2200	3/23/15	3/11/17	Scaffold	SC	SAMEA1408240	GCA_001109165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/165/GCA_001109165.1_7444_8_52	-	0105+29173
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35314	65.6	-	CHJA01	83	4287	4063	4/21/15	3/11/17	Scaffold	SC	SAMEA1707549	GCA_001326025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/025/GCA_001326025.1_8939_3_68	-	2395E
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.93733	50.4	-	CXZM01	119	5204	4849	8/22/15	2/24/17	Contig	SC	SAMEA1466163	GCA_001284305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/305/GCA_001284305.1_7748_7_43	-	700337
Salmonella enterica subsp. enterica serovar Derby	28144	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.90593	51.9	-	MXJA01	74	5027	4746	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367851	GCA_002032345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/345/GCA_002032345.1_ASM203234v1	-	BCW_2038
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.91303	32.8	-	LKZM01	160	3160	2870	1/5/17	3/6/17	Scaffold	USDA-ARS	SAMN03893356	GCA_001936715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/715/GCA_001936715.1_UCI21_v1.0	-	ST5:UCI 21
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.98278	32.8	-	LKZP01	175	3252	2946	1/5/17	3/9/17	Scaffold	USDA-ARS	SAMN03893359	GCA_001936755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/755/GCA_001936755.1_UCI24_v1.0	-	ST5:UCI 24
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70371	52.1	-	MXIZ01	89	4841	4567	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367852	GCA_002032355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/355/GCA_002032355.1_ASM203235v1	-	BCW_2039
Escherichia coli	562	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	5.0918	50.5	-	CYFY01	262	5556	5036	8/24/15	2/24/17	Contig	SC	SAMEA1528004	GCA_001284365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/365/GCA_001284365.1_8205_8_72	-	R402077
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35338	65.6	-	CFIX01	81	4275	4063	3/15/15	3/11/17	Scaffold	SC	SAMEA1707557	GCA_001326045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/045/GCA_001326045.1_8987_4_36	-	0436A
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14605	39.6	-	CKOX01	54	2324	2071	3/21/15	3/11/17	Scaffold	SC	SAMEA1024847	GCA_001109185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/185/GCA_001109185.1_6680_4_20	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.01432	39.7	-	CLAP01	46	2186	1967	3/21/15	3/11/17	Scaffold	SC	SAMEA1025638	GCA_001109245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/245/GCA_001109245.1_6841_7_13	-	SMRU1333
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37152	65.6	-	CFNK01	82	4275	4081	3/15/15	3/11/17	Scaffold	SC	SAMEA1707567	GCA_001326065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/065/GCA_001326065.1_8987_4_33	-	0036Q
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.7493	50.5	-	CYBV01	57	4981	4659	8/22/15	2/24/17	Contig	SC	SAMEA1466169	GCA_001284445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/445/GCA_001284445.1_7790_1_76	-	102014_aEPEC
"Salmonella enterica subsp. enterica serovar 4,12:d:-"	1620418	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.07183	51.6	-	MXJI01	132	5198	4894	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367844	GCA_002032385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/385/GCA_002032385.1_ASM203238v1	-	BCW_2030
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.93015	32.8	-	LLAK01	119	3135	2922	1/5/17	3/6/17	Scaffold	USDA-ARS	SAMN03893380	GCA_001936765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/765/GCA_001936765.1_UCI45_v1.0	-	ST5:UCI 45
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.86874	32.8	-	LKZS01	182	3101	2841	1/5/17	3/6/17	Scaffold	USDA-ARS	SAMN03893362	GCA_001936785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/785/GCA_001936785.1_UCI27_v1.0	-	ST5:UCI 27
"Salmonella enterica subsp. enterica serovar 4,[5],12:r:-"	1192775	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.87156	52.2	-	MXJJ01	51	5015	4770	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367843	GCA_002032395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/395/GCA_002032395.1_ASM203239v1	-	BCW_2029
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.92727	50.8	-	CYBN01	294	5404	4942	8/22/15	2/24/17	Contig	SC	SAMEA1466158	GCA_001284465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/465/GCA_001284465.1_7790_1_51	-	201381_aEPEC
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39454	65.6	-	CIEN01	76	4298	4074	4/21/15	3/11/17	Scaffold	SC	SAMEA1707569	GCA_001326095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/095/GCA_001326095.1_8987_4_9	-	0014R
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21713	39.6	-	CPMF01	84	2458	2203	3/23/15	3/11/17	Scaffold	SC	SAMEA1408215	GCA_001109445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/445/GCA_001109445.1_7444_8_66	-	0212+05159
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.12866	39.7	-	CPLF01	90	2334	2146	3/23/15	3/11/17	Scaffold	SC	SAMEA682595	GCA_001109465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/465/GCA_001109465.1_5381_3_9	-	09B07963
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38689	65.6	-	CFRP01	71	4299	4080	3/15/15	3/11/17	Scaffold	SC	SAMEA1707579	GCA_001326115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/115/GCA_001326115.1_8939_3_67	-	2378L
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.09302	50.5	-	CYAZ01	327	5659	5060	8/22/15	2/24/17	Contig	SC	SAMEA1466151	GCA_001284505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/505/GCA_001284505.1_7748_7_26	-	403308_aEPEC
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.97933	51.8	-	MXJN01	71	5076	4845	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367838	GCA_002032425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/425/GCA_002032425.1_ASM203242v1	-	BCW_2024
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.95833	32.8	-	LKZK01	186	3232	2909	1/5/17	3/6/17	Scaffold	USDA-ARS	SAMN03893354	GCA_001936835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/835/GCA_001936835.1_UCI19_v1.0	-	ST5:UCI 19
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.86258	32.9	-	LLAL01	182	3129	2827	1/5/17	3/9/17	Scaffold	USDA-ARS	SAMN03893381	GCA_001936845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/845/GCA_001936845.1_UCI46_v1.0	-	ST5:UCI 46
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.84853	52.1	-	MXJM01	74	4970	4729	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367839	GCA_002032435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/435/GCA_002032435.1_ASM203243v1	-	BCW_2025
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.21621	50.5	-	CYCQ01	271	5639	5169	8/22/15	2/24/17	Contig	SC	SAMEA1466116	GCA_001284525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/525/GCA_001284525.1_7790_1_72	-	702890_aEPEC
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30281	65.4	-	CFII01	165	4305	4039	3/15/15	3/11/17	Scaffold	SC	SAMEA1018848	GCA_001327595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/595/GCA_001327595.1_6570_7_18	-	Bir 374
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.23345	39.4	-	CKFQ01	100	2486	2221	3/21/15	3/11/17	Scaffold	SC	SAMEA1023824	GCA_001109545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/545/GCA_001109545.1_6630_3_8	-	6B
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.16209	39.7	-	CLWI01	67	2366	2152	3/21/15	3/11/17	Scaffold	SC	SAMEA1026188	GCA_001109565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/565/GCA_001109565.1_6983_4_88	-	SMRU2296
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31059	65.4	-	CIDL01	151	4302	4051	4/21/15	3/11/17	Scaffold	SC	SAMEA1018856	GCA_001327615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/615/GCA_001327615.1_6540_6_11	-	Bir 245
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.40881	50.2	-	CYBM01	151	5720	5271	8/22/15	2/24/17	Contig	SC	SAMEA1466183	GCA_001284545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/545/GCA_001284545.1_7790_1_53	-	400654_aEPEC
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.85537	52.2	-	MXJO01	85	4992	4747	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367836	GCA_002032465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/465/GCA_002032465.1_ASM203246v1	-	BCW_2022
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.71251	33	-	LLAI01	222	2993	2705	1/5/17	3/15/17	Scaffold	USDA-ARS	SAMN03893378	GCA_001936855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/855/GCA_001936855.1_UCI43_v1.0	-	ST5:UCI 43
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.80461	32.8	-	LLAR01	202	3080	2760	1/5/17	3/6/17	Scaffold	USDA-ARS	SAMN03893387	GCA_001936895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/895/GCA_001936895.1_UCI52_v1.0	-	ST5:UCI 52
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.9608	51.9	-	MXJW01	332	5023	4764	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357015	GCA_002032485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/485/GCA_002032485.1_ASM203248v1	-	BCW_2011
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.78087	50.5	-	CYCL01	102	5057	4685	8/22/15	2/24/17	Contig	SC	SAMEA1466113	GCA_001284565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/565/GCA_001284565.1_7790_1_86	-	300812_aEPEC
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30412	65.4	-	CFJH01	181	4300	4010	3/15/15	3/11/17	Scaffold	SC	SAMEA1018857	GCA_001327635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/635/GCA_001327635.1_6540_2_16	-	Bir 158
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.12838	39.8	-	CMTM01	118	2217	1963	3/23/15	3/6/17	Scaffold	SC	SAMEA1022808	GCA_001109665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/665/GCA_001109665.1_5737_2_2	-	376
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.08497	39.6	-	CMKL01	37	2294	2051	3/23/15	3/4/17	Scaffold	SC	SAMEA1029369	GCA_001109705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/705/GCA_001109705.1_7054_4_22	-	SMRU3046
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.34896	65.5	-	CHWP01	142	4303	4073	4/21/15	3/11/17	Scaffold	SC	SAMEA1018865	GCA_001327655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/655/GCA_001327655.1_7054_2_78	-	Bir 477
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.79358	50.6	-	CXZJ01	103	4985	4700	8/22/15	2/24/17	Contig	SC	SAMEA1466199	GCA_001284605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/605/GCA_001284605.1_7748_7_27	-	500275_aEPEC
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.8674	52	-	MXJX01	81	4930	4661	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357014	GCA_002032505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/505/GCA_002032505.1_ASM203250v1	-	BCW_2010
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.87031	32.9	-	LLAN01	217	3124	2801	1/5/17	3/6/17	Scaffold	USDA-ARS	SAMN03893383	GCA_001936915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/915/GCA_001936915.1_UCI48_v1.0	-	ST5:UCI 48
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.81774	32.9	-	LLAV01	286	3143	2733	1/5/17	3/6/17	Scaffold	USDA-ARS	SAMN03893391	GCA_001936985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/985/GCA_001936985.1_UCI56_v1.0	-	ST5:UCI 56
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7049	52.1	-	MXJV01	42	4812	4565	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357016	GCA_002032515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/515/GCA_002032515.1_ASM203251v1	-	BCW_2013
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.14008	50.7	-	CXZO01	126	5427	5067	8/22/15	2/24/17	Contig	SC	SAMEA1466115	GCA_001284665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/665/GCA_001284665.1_7748_7_34	-	503459_aEPEC
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31792	65.5	-	CFSC01	140	4304	4047	3/15/15	3/11/17	Scaffold	SC	SAMEA1018870	GCA_001327675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/675/GCA_001327675.1_6540_7_6	-	Bir 267
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.06731	39.6	-	CREL01	69	2241	1997	3/23/15	3/6/17	Scaffold	SC	SAMEA1024733	GCA_001109765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/765/GCA_001109765.1_6731_5_24	-	SMRU1104
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.02679	39.6	-	CMUJ01	131	2192	1960	3/23/15	3/4/17	Scaffold	SC	SAMEA1022901	GCA_001109865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/865/GCA_001109865.1_5737_6_4	-	144
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32104	65.5	-	CFSJ01	148	4308	4035	3/15/15	3/11/17	Scaffold	SC	SAMEA1018886	GCA_001327695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/695/GCA_001327695.1_6540_7_7	-	Bir 268
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.7967	50.7	-	CXZC01	57	4946	4651	8/22/15	2/24/17	Contig	SC	SAMEA1466200	GCA_001284725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/725/GCA_001284725.1_7748_7_36	-	504225_aEPEC
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.11971	51.8	-	MXJY01	82	5312	5046	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357013	GCA_002032545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/545/GCA_002032545.1_ASM203254v1	-	BCW_2008
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.70299	32.8	-	LLBD01	224	2998	2621	1/5/17	3/6/17	Scaffold	USDA-ARS	SAMN03893399	GCA_001937005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/005/GCA_001937005.1_UCI64_v1.0	-	ST5:UCI 64
Staphylococcus aureus M1057	1392063	PRJNA353171	353171	Terrabacteria group	Firmicutes	2.78034	32.8	-	MPPG01	90	2895	2662	1/26/17	3/6/17	Scaffold	Hvidovre Hospital - University of Copenhagen	SAMN06016481	GCA_001971545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/545/GCA_001971545.1_ASM197154v1	-	M1057
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66247	52.2	-	MXKB01	43	4729	4501	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357010	GCA_002032565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/565/GCA_002032565.1_ASM203256v1	-	BCW_2003
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.20469	50.4	-	CYCR01	130	5532	5111	8/22/15	2/24/17	Contig	SC	SAMEA1466108	GCA_001284745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/745/GCA_001284745.1_7790_1_91	-	401709_aEPEC
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30651	65.4	-	CFIJ01	177	4288	4014	3/15/15	3/11/17	Scaffold	SC	SAMEA1018901	GCA_001327715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/715/GCA_001327715.1_6570_6_19	-	Bir 351
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.15607	39.7	-	CLOW01	61	2387	2180	3/21/15	3/4/17	Scaffold	SC	SAMEA1028622	GCA_001109885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/885/GCA_001109885.1_6949_2_22	-	SMRU2446
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.07618	39.6	-	CLIJ01	49	2287	2048	3/21/15	3/15/17	Scaffold	SC	SAMEA1026139	GCA_001109905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/905/GCA_001109905.1_6925_6_24	-	SMRU2208
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29056	65.4	-	CFKO01	175	4290	3995	3/15/15	3/11/17	Scaffold	SC	SAMEA1018911	GCA_001327735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/735/GCA_001327735.1_6570_7_23	-	Bir 380
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.14077	50.5	-	CXZN01	131	5463	5095	8/22/15	2/24/17	Contig	SC	SAMEA1466148	GCA_001284765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/765/GCA_001284765.1_7748_7_37	-	504300_aEPEC
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.56301	52.2	-	MXKA01	95	4575	4354	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357011	GCA_002032585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/585/GCA_002032585.1_ASM203258v1	-	BCW_2004
Staphylococcus aureus	1280	PRJNA379934	379934	Terrabacteria group	Firmicutes	2.7591	32.6956	plasmid pATCC27217-2:NZ_CM007848.1/CM007848.1	NARB01	25	2874	2747	4/12/17	4/16/17	Scaffold	Loyola University Chicago	SAMN06624119	GCA_002088055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/055/GCA_002088055.1_ASM208805v1	-	ATCC 27217
Staphylococcus aureus	1280	PRJNA269675	269675	Terrabacteria group	Firmicutes	2.75267	32.7	-	NIDC01	93	2865	2613	6/9/17	6/12/17	Scaffold	SRCAMB	SAMN07167826	GCA_002188415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/415/GCA_002188415.1_ASM218841v1	-	SCPM-O-B-7907
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.64726	52	-	MXKD01	391	4621	4347	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357008	GCA_002032605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/605/GCA_002032605.1_ASM203260v1	-	BCW_2000
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.4519	50.4	-	CYAH01	179	5826	5354	8/22/15	2/24/17	Contig	SC	SAMEA1466187	GCA_001284785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/785/GCA_001284785.1_7748_7_28	-	500618_aEPEC
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33133	65.4	-	CHBC01	167	4319	4070	4/21/15	3/11/17	Scaffold	SC	SAMEA1018917	GCA_001327755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/755/GCA_001327755.1_6570_5_15	-	Bir 323
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.13512	39.4	-	CKEU01	100	2383	2140	3/21/15	3/4/17	Scaffold	SC	SAMEA1024115	GCA_001109925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/925/GCA_001109925.1_6630_2_23	-	10B
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12867	39.5	-	CMPA01	31	2366	2111	3/23/15	3/4/17	Scaffold	SC	SAMEA2061717	GCA_001110125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/125/GCA_001110125.1_9803_7_49	-	23F
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.3283	65.4	-	CFIB01	181	4315	4030	3/15/15	3/11/17	Scaffold	SC	SAMEA1018943	GCA_001327775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/775/GCA_001327775.1_6570_5_16	-	Bir 324
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.9611	50.8	-	CYAM01	183	5348	4908	8/22/15	2/24/17	Contig	SC	SAMEA1466143	GCA_001284805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/805/GCA_001284805.1_7748_7_14	-	202833_aEPEC
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69847	52.2	-	MXKF01	108	4770	4534	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357006	GCA_002032615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/615/GCA_002032615.1_ASM203261v1	-	BCW_1998
Staphylococcus aureus	1280	PRJNA269675	269675	Terrabacteria group	Firmicutes	2.74841	32.7	-	NIDA01	56	2854	2674	6/9/17	6/12/17	Scaffold	SRCAMB	SAMN07167824	GCA_002188495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/495/GCA_002188495.1_ASM218849v1	-	SCPM-O-B-7904
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.82951	32.8	-	LKVK01	157	2981	2724	8/28/17	9/18/17	Scaffold	USDA-ARS	SAMN03893311	GCA_002272985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/985/GCA_002272985.1_ISU-1002_v1.0	-	ISU 1002
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.54591	52.3	-	MXKG01	39	4610	4366	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357005	GCA_002032645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/645/GCA_002032645.1_ASM203264v1	-	BCW_1997
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.64339	50.7	-	CYDV01	39	4845	4555	8/22/15	2/24/17	Contig	SC	SAMEA1530998	GCA_001284905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/905/GCA_001284905.1_8205_3_31	-	401082
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30361	65.4	-	CHBD01	147	4308	4047	4/21/15	3/11/17	Scaffold	SC	SAMEA1018945	GCA_001327795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/795/GCA_001327795.1_6570_8_1	-	Bir 382
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.22024	39.5	-	CPKY01	97	2458	2212	3/22/15	3/10/17	Scaffold	SC	SAMEA1408316	GCA_001110225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/225/GCA_001110225.1_7444_8_14	-	9702+03174
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15639	39.5	-	CKMR01	48	2375	2167	3/21/15	3/11/17	Scaffold	SC	SAMEA1024190	GCA_001110265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/265/GCA_001110265.1_6649_8_12	-	40
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33661	65.4	-	CHWR01	174	4321	4012	4/21/15	3/11/17	Scaffold	SC	SAMEA1018974	GCA_001327815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/815/GCA_001327815.1_6570_8_9	-	Bir 390
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.1412	50.5	-	CYDD01	256	5681	5076	8/22/15	2/24/17	Contig	SC	SAMEA1466162	GCA_001284925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/925/GCA_001284925.1_7790_1_88	-	400897_aEPEC
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.018	51.8	-	MXFU01	129	5162	4878	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367984	GCA_002032665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/665/GCA_002032665.1_ASM203266v1	-	BCW_2178
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.84205	32.8	-	LKVJ01	157	3037	2728	8/28/17	9/18/17	Scaffold	USDA-ARS	SAMN03893310	GCA_002272995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/272/995/GCA_002272995.1_ISU-1001_v1.0	-	ISU 1001
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.76404	32.8	-	LKVL01	194	2939	2665	8/28/17	9/18/17	Scaffold	USDA-ARS	SAMN03893312	GCA_002273015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/015/GCA_002273015.1_ISU-1004_v1.0	-	ISU 1004
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.99542	52.1	-	MXFV01	86	5137	4877	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357025	GCA_002032675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/675/GCA_002032675.1_ASM203267v1	-	BCW_2177
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.97027	50.5	-	CYCA01	202	5392	4863	8/22/15	2/24/17	Contig	SC	SAMEA1466149	GCA_001285045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/045/GCA_001285045.1_7790_1_67	-	403726_aEPEC
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30924	65.4	-	CFJG01	159	4310	4033	3/15/15	3/11/17	Scaffold	SC	SAMEA1018985	GCA_001327835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/835/GCA_001327835.1_6570_5_5	-	Bir 313
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.21483	39.4	-	CLUX01	84	2458	2199	3/21/15	3/11/17	Scaffold	SC	SAMEA1025938	GCA_001110285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/285/GCA_001110285.1_6983_2_7	-	SMRU2215
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.03345	39.6	-	CKKX01	58	2231	2017	3/21/15	3/10/17	Scaffold	SC	SAMEA1023925	GCA_001110325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/325/GCA_001110325.1_6631_7_23	-	7F
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28938	65.4	-	CFJD01	184	4309	4027	3/15/15	3/11/17	Scaffold	SC	SAMEA1019011	GCA_001327855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/855/GCA_001327855.1_6540_2_3	-	Bir 145
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.9907	50.5	-	CYDR01	86	5239	4928	8/22/15	2/24/17	Contig	SC	SAMEA1531026	GCA_001285065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/065/GCA_001285065.1_8205_3_27	-	702328
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.98468	52.1	-	MXGA01	94	5163	4891	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367979	GCA_002032705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/705/GCA_002032705.1_ASM203270v1	-	BCW_2172
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.78652	32.8	-	LKVN01	111	2913	2698	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893314	GCA_002273065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/065/GCA_002273065.1_ISU-1008_v1.0	-	ST5:ISU 1008
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.78537	32.8	-	LKVO01	69	2872	2712	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893315	GCA_002273075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/075/GCA_002273075.1_ISU-1009_v1.0	-	ST5:ISU 1009
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.77598	52.1	-	MXGF01	70	4854	4644	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367973	GCA_002032725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/725/GCA_002032725.1_ASM203272v1	-	BCW_2166
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.27285	50.4	-	CYAU01	246	5760	5300	8/22/15	2/24/17	Contig	SC	SAMEA1466164	GCA_001285105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/105/GCA_001285105.1_7748_7_38	-	504449
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29354	65.4	-	CFJI01	158	4295	4021	3/15/15	3/11/17	Scaffold	SC	SAMEA1019029	GCA_001327875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/875/GCA_001327875.1_6570_8_4	-	Bir 385
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.03422	39.7	-	CLPA01	78	2231	2023	3/21/15	3/10/17	Scaffold	SC	SAMEA1028955	GCA_001110525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/525/GCA_001110525.1_6949_2_4	-	SMRU2428
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.12166	39.7	-	CMVN01	62	2286	1997	3/23/15	3/11/17	Scaffold	SC	SAMEA1022777	GCA_001110565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/565/GCA_001110565.1_5750_2_5	-	240
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.2977	65.3	-	CFSF01	155	4287	4024	3/15/15	3/11/17	Scaffold	SC	SAMEA1019041	GCA_001327895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/895/GCA_001327895.1_6540_3_16	-	Bir 184
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.88744	50.6	-	CYBG01	140	5242	4821	8/22/15	2/24/17	Contig	SC	SAMEA1466154	GCA_001285145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/145/GCA_001285145.1_7748_7_7	-	200135_aEPEC
Salmonella enterica subsp. enterica serovar Albany	211968	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.73143	52.1	-	MXGT01	39	4763	4538	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367940	GCA_002032745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/745/GCA_002032745.1_ASM203274v1	-	BCW_2132
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.81077	32.8	-	LKVP01	91	2925	2730	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893316	GCA_002273085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/085/GCA_002273085.1_ISU-1010_v1.0	-	ST5:ISU 1010
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.81523	32.8	-	LKVQ01	60	2919	2748	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893230	GCA_002273095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/095/GCA_002273095.1_ISU-837_v1.0	-	ST5:ISU 837
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69878	52.1	-	MXGY01	438	5035	4518	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367934	GCA_002032765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/765/GCA_002032765.1_ASM203276v1	-	BCW_2126
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.83996	50.4	-	CYBK01	89	5104	4753	8/22/15	2/24/17	Contig	SC	SAMEA1466198	GCA_001285265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/265/GCA_001285265.1_7790_1_54	-	400714_aEPEC
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31334	65.4	-	CFKM01	175	4314	4026	3/15/15	3/11/17	Scaffold	SC	SAMEA1019056	GCA_001327915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/915/GCA_001327915.1_6540_6_12	-	Bir 247
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.09165	39.6	-	CRPQ01	53	2297	2068	3/23/15	3/11/17	Scaffold	SC	SAMEA1024690	GCA_001110585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/585/GCA_001110585.1_6775_1_21	-	SMRU837
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05655	39.5	-	CLQB01	45	2252	2019	3/21/15	3/10/17	Scaffold	SC	SAMEA1028936	GCA_001110625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/625/GCA_001110625.1_6949_3_24	-	SMRU2472
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32676	65.4	-	CHAZ01	147	4302	4018	4/21/15	3/11/17	Scaffold	SC	SAMEA1019080	GCA_001327935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/935/GCA_001327935.1_6540_7_21	-	Bir 282
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.84126	50.5	-	CYBH01	136	5170	4764	8/22/15	2/24/17	Contig	SC	SAMEA1466168	GCA_001285345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/345/GCA_001285345.1_7748_7_8	-	200439_aEPEC
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66167	51.3	-	MXHB01	684	4509	4112	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367929	GCA_002032795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/795/GCA_002032795.1_ASM203279v1	-	N27403
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.76205	32.9	-	LKVS01	115	2886	2678	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893232	GCA_002273145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/145/GCA_002273145.1_ISU-842_v1.0	-	ST5:ISU 842
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.87788	32.8	-	LKVR01	138	3045	2789	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893231	GCA_002273155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/155/GCA_002273155.1_ISU-839_v1.0	-	ST5:ISU 839
Salmonella enterica subsp. enterica serovar Anatum	58712	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69879	52.2	-	MXHG01	79	4801	4553	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367914	GCA_002032815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/815/GCA_002032815.1_ASM203281v1	-	BCW_2104
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.05727	50.6	-	CYCE01	166	5415	5014	8/22/15	2/24/17	Contig	SC	SAMEA1466194	GCA_001285405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/405/GCA_001285405.1_7790_1_74	-	100383_aEPEC
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30154	65.4	-	CFMH01	192	4300	4032	3/15/15	3/11/17	Scaffold	SC	SAMEA1019084	GCA_001327955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/955/GCA_001327955.1_6540_4_22	-	Bir 214
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.11856	39.6	-	CLTR01	62	2348	2112	3/21/15	3/11/17	Scaffold	SC	SAMEA1028663	GCA_001110665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/665/GCA_001110665.1_6972_5_13	-	SMRU2629
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04668	39.7	-	CKGJ01	41	2236	2024	3/21/15	3/11/17	Scaffold	SC	SAMEA1023918	GCA_001110785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/785/GCA_001110785.1_6631_1_14	-	15A
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.34542	65.5	-	CFIO01	169	4308	4048	3/15/15	3/11/17	Scaffold	SC	SAMEA1019109	GCA_001327975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/975/GCA_001327975.1_7054_2_65	-	Bir 464
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.4125	50.5	-	CYDC01	274	5862	5369	8/22/15	2/24/17	Contig	SC	SAMEA1466192	GCA_001285425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/425/GCA_001285425.1_7790_1_85	-	202621_aEPEC
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.692	52.1	-	MXJS01	43	4807	4536	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357020	GCA_002032855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/855/GCA_002032855.1_ASM203285v1	-	BCW_2017
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.66219	33	-	LKVI01	243	2795	2531	8/28/17	9/18/17	Scaffold	USDA-ARS	SAMN03893309	GCA_002273165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/165/GCA_002273165.1_ISU-1000_v1.0	-	ISU 1000
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.72314	33	-	LKVM01	190	2878	2613	8/28/17	10/2/17	Scaffold	USDA-ARS	SAMN03893313	GCA_002273175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/175/GCA_002273175.1_ISU-1007_v1.0	-	ISU 1007
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.21107	52	-	MXHM01	742	5764	5105	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367905	GCA_002032875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/875/GCA_002032875.1_ASM203287v1	-	BCW_2095
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.93727	50.5	-	CYEZ01	97	5179	4860	8/24/15	2/24/17	Contig	SC	SAMEA1531033	GCA_001285445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/445/GCA_001285445.1_8205_3_65	-	302701
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.3145	65.4	-	CHWO01	158	4313	4050	4/21/15	3/11/17	Scaffold	SC	SAMEA1019110	GCA_001327995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/327/995/GCA_001327995.1_6540_4_20	-	Bir 212
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07517	39.7	-	CIMI01	81	2302	2065	3/21/15	3/10/17	Scaffold	SC	SAMEA1024581	GCA_001110825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/825/GCA_001110825.1_6680_5_10	-	SMRU922
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	1.95431	39.8	-	CQXP01	28	2138	1912	3/23/15	3/11/17	Scaffold	SC	SAMEA1025029	GCA_001110845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/845/GCA_001110845.1_6730_1_22	-	SMRU598
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30885	65.4	-	CFSI01	161	4295	4044	3/15/15	3/11/17	Scaffold	SC	SAMEA1019133	GCA_001328015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/015/GCA_001328015.1_6570_7_3	-	Bir 359
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.06564	50.7	-	CYCI01	331	5534	5000	8/22/15	2/24/17	Contig	SC	SAMEA1466188	GCA_001285465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/465/GCA_001285465.1_7790_1_63	-	402743_aEPEC
"Salmonella enterica subsp. arizonae serovar 18:z4,z23:-"	1192839	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.4871	51.5	-	MXHP01	123	4487	4032	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367900	GCA_002032885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/885/GCA_002032885.1_ASM203288v1	-	BCW_2090
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.87132	32.7	-	LKVV01	110	2998	2782	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893235	GCA_002273225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/225/GCA_002273225.1_ISU-873_v1.0	-	ST5:ISU 873
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.79506	32.8	-	LKWB01	174	2972	2691	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893241	GCA_002273245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/245/GCA_002273245.1_ISU-879_v1.0	-	ST5:ISU 879
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.75634	52.2	-	MXHR01	33	4847	4628	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367897	GCA_002032925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/925/GCA_002032925.1_ASM203292v1	-	BCW_2087
Escherichia coli	562	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	5.30071	50.5	-	CYGF01	200	5773	5312	8/24/15	2/24/17	Contig	SC	SAMEA1527985	GCA_001285485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/485/GCA_001285485.1_8205_8_84	-	R302583-2A
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33115	65.5	-	CHIM01	152	4293	4068	4/21/15	3/11/17	Scaffold	SC	SAMEA1019166	GCA_001328035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/035/GCA_001328035.1_7054_1_16	-	Bir 415
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1263	39.6	-	CKWX01	47	2362	2104	3/21/15	3/11/17	Scaffold	SC	SAMEA1026094	GCA_001110865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/865/GCA_001110865.1_6823_6_1	-	SMRU1969
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.07208	39.8	-	CKYY01	81	2240	1994	3/21/15	3/11/17	Scaffold	SC	SAMEA1025922	GCA_001110885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/885/GCA_001110885.1_6840_1_21	-	SMRU1773
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29951	65.4	-	CFMI01	194	4296	4033	3/15/15	3/11/17	Scaffold	SC	SAMEA1019174	GCA_001328055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/055/GCA_001328055.1_6540_1_16	-	Bir 133
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.96098	50.6	-	CYCO01	156	5301	4921	8/22/15	2/24/17	Contig	SC	SAMEA1466159	GCA_001285505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/505/GCA_001285505.1_7790_1_81	-	201191_aEPEC
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.73245	52.2	-	MXHY01	52	4802	4573	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367885	GCA_002032945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/945/GCA_002032945.1_ASM203294v1	-	BCW_2074
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.86686	32.8	-	LKVX01	107	3024	2793	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893237	GCA_002273255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/255/GCA_002273255.1_ISU-875_v1.0	-	ST5:ISU 875
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.88543	32.8	-	LKVZ01	168	3083	2776	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893239	GCA_002273265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/265/GCA_002273265.1_ISU-877_v1.0	-	ST5:ISU 877
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.86569	52.2	-	MXHT01	116	4996	4755	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367895	GCA_002032975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/975/GCA_002032975.1_ASM203297v1	-	BCW_2085
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.00361	50.6	-	CXZW01	147	5337	4973	8/22/15	2/24/17	Contig	SC	SAMEA1466196	GCA_001285525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/525/GCA_001285525.1_7748_7_4	-	102298_aEPEC
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31437	65.4	-	CHIK01	152	4302	4044	4/21/15	3/11/17	Scaffold	SC	SAMEA1019189	GCA_001328075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/075/GCA_001328075.1_6540_2_8	-	Bir 150
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.1282	39.7	-	CMWG01	69	2264	1987	3/23/15	3/11/17	Scaffold	SC	SAMEA1022847	GCA_001110945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/945/GCA_001110945.1_5756_7_6	-	314
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04934	39.8	-	CKFB01	50	2238	2002	3/21/15	3/11/17	Scaffold	SC	SAMEA1024209	GCA_001110965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/965/GCA_001110965.1_6630_3_13	-	15A
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32171	65.4	-	CFIA01	160	4317	4033	3/15/15	3/11/17	Scaffold	SC	SAMEA1019224	GCA_001328095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/095/GCA_001328095.1_6540_6_19	-	Bir 254
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.04782	50.6	-	CXZR01	116	5349	5018	8/22/15	2/24/17	Contig	SC	SAMEA1466096	GCA_001285665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/665/GCA_001285665.1_7748_7_21	-	402099_aEPEC
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.86503	52	-	MXIB01	85	4926	4657	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367881	GCA_002033015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/015/GCA_002033015.1_ASM203301v1	-	BCW_2070
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.95011	32.7	-	LKWC01	173	3165	2831	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893242	GCA_002273305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/305/GCA_002273305.1_ISU-880_v1.0	-	ST5:ISU 880
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.78439	32.8	-	LKWG01	120	2912	2687	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893246	GCA_002273325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/325/GCA_002273325.1_ISU-886_v1.0	-	ST5:ISU 886
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.95279	52.1	-	MXIF01	84	5074	4822	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367877	GCA_002033065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/065/GCA_002033065.1_ASM203306v1	-	BCW_2065
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.02623	50.7	-	CYAF01	166	5363	5018	8/22/15	2/24/17	Contig	SC	SAMEA1466104	GCA_001285745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/745/GCA_001285745.1_7748_7_35	-	503662_aEPEC
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31501	65.3	-	CFSM01	171	4301	4024	3/15/15	3/11/17	Scaffold	SC	SAMEA1019239	GCA_001328115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/115/GCA_001328115.1_6540_8_10	-	Bir 295
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.27234	39.5	-	CLJX01	97	2523	2249	3/21/15	3/11/17	Scaffold	SC	SAMEA1028740	GCA_001110985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/985/GCA_001110985.1_6925_8_21	-	SMRU2541
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.1627	39.5	-	CLXH01	56	2407	2166	3/21/15	3/11/17	Scaffold	SC	SAMEA1029041	GCA_001111105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/105/GCA_001111105.1_6983_5_23	-	SMRU2327
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.34232	65.4	-	CIDM01	175	4320	4082	4/21/15	3/11/17	Scaffold	SC	SAMEA1019244	GCA_001328135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/135/GCA_001328135.1_7054_1_12	-	Bir 411
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.33768	50.4	-	CYCC01	237	5868	5392	8/22/15	2/24/17	Contig	SC	SAMEA1466153	GCA_001285765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/765/GCA_001285765.1_7790_1_66	-	403096
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.90883	52	-	MXII01	140	5066	4791	3/17/17	4/10/17	Contig	University of California at Davis	SAMN02367870	GCA_002033085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/085/GCA_002033085.1_ASM203308v1	-	BCW_2058
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.82542	32.8	-	LKWE01	102	2965	2744	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893244	GCA_002273335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/335/GCA_002273335.1_ISU-882_v1.0	-	ST5:ISU 882
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.77465	32.8	-	LKWF01	231	3021	2622	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893245	GCA_002273345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/345/GCA_002273345.1_ISU-883_v1.0	-	ST5:ISU 883
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.60522	52.1	-	MXIS01	70	4719	4453	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367860	GCA_002033105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/105/GCA_002033105.1_ASM203310v1	-	BCW_2048
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.9151	50.8	-	CYEV01	263	5362	4903	8/24/15	2/24/17	Contig	SC	SAMEA1531034	GCA_001285785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/785/GCA_001285785.1_8205_3_49	-	503023
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.27153	65.4	-	CHWQ01	173	4297	4015	4/21/15	3/11/17	Scaffold	SC	SAMEA1019257	GCA_001328155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/155/GCA_001328155.1_6570_7_13	-	Bir 369
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.06359	39.6	-	CKCF01	76	2273	2058	3/21/15	3/10/17	Scaffold	SC	SAMEA1024058	GCA_001111125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/125/GCA_001111125.1_6593_4_19	-	35F
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.07965	39.5	-	CLHZ01	55	2268	2041	3/21/15	3/11/17	Scaffold	SC	SAMEA1026207	GCA_001111145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/145/GCA_001111145.1_6925_6_14	-	SMRU2198
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33204	65.5	-	CFKN01	152	4316	4085	3/15/15	3/11/17	Scaffold	SC	SAMEA1019263	GCA_001328175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/175/GCA_001328175.1_7054_1_25	-	Bir 424
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.02206	50.5	-	CXZI01	106	5395	5027	8/22/15	2/24/17	Contig	SC	SAMEA1466140	GCA_001285825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/825/GCA_001285825.1_7748_7_20	-	402048_aEPEC
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80811	52	-	MXJF01	40	4916	4676	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367846	GCA_002033125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/125/GCA_002033125.1_ASM203312v1	-	BCW_2033
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.9533	32.7	-	LKWI01	194	3194	2836	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893248	GCA_002273385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/385/GCA_002273385.1_ISU-888_v1.0	-	ST5:ISU 888
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.74312	33	-	LKWL01	157	2907	2631	8/28/17	10/2/17	Scaffold	USDA-ARS	SAMN03893251	GCA_002273395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/395/GCA_002273395.1_ISU-912_v1.0	-	ISU 912
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.10777	51.9	-	MXJC01	182	5307	4961	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367849	GCA_002033135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/135/GCA_002033135.1_ASM203313v1	-	BCW_2036
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.37042	50.4	-	CYBY01	242	5892	5425	8/22/15	2/24/17	Contig	SC	SAMEA1466195	GCA_001285845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/845/GCA_001285845.1_7790_1_64	-	402780
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.2948	65.4	-	CFJE01	205	4323	4034	3/15/15	3/11/17	Scaffold	SC	SAMEA1019267	GCA_001328195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/195/GCA_001328195.1_6540_2_10	-	Bir 152
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.99768	39.8	-	CQXC01	83	2165	1954	3/23/15	3/4/17	Scaffold	SC	SAMEA1023995	GCA_001111165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/165/GCA_001111165.1_6714_8_21	-	SMRU573
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.08849	39.6	-	CLKV01	57	2309	2079	3/21/15	3/4/17	Scaffold	SC	SAMEA1029262	GCA_001111265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/265/GCA_001111265.1_6938_3_35	-	SMRU3160
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30962	65.4	-	CIEB01	194	4318	4025	4/21/15	3/11/17	Scaffold	SC	SAMEA1019272	GCA_001328215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/215/GCA_001328215.1_6570_6_24	-	Bir 356
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.25464	50.7	-	CYAX01	282	5753	5212	8/22/15	2/24/17	Contig	SC	SAMEA1466103	GCA_001285865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/865/GCA_001285865.1_7553_7_64	-	505513_aEPEC
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.03071	52	-	MXJD01	111	5179	4906	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367848	GCA_002033165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/165/GCA_002033165.1_ASM203316v1	-	BCW_2035
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.81141	32.9	-	LKWM01	131	2976	2702	8/28/17	10/2/17	Scaffold	USDA-ARS	SAMN03893252	GCA_002273415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/415/GCA_002273415.1_ISU-913_v1.0	-	ISU 913
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.48187	33	-	LKWO01	131	2556	2370	8/28/17	8/28/17	Scaffold	USDA-ARS	SAMN03893254	GCA_002273445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/445/GCA_002273445.1_ISU-915_v1.0	-	ST398:ISU 915
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.95161	52.1	-	MXJG01	58	5129	4873	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357024	GCA_002033175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/175/GCA_002033175.1_ASM203317v1	-	BCW_2032
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.14288	50.5	-	CYDG01	272	5668	5082	8/22/15	2/24/17	Contig	SC	SAMEA1466182	GCA_001285885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/885/GCA_001285885.1_7790_1_94	-	402227_aEPEC
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29215	65.4	-	CFRZ01	229	4286	4009	3/15/15	3/11/17	Scaffold	SC	SAMEA1019273	GCA_001328235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/235/GCA_001328235.1_6540_1_7	-	Bir 124
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.02339	39.7	-	CMAI01	42	2234	1990	3/21/15	3/4/17	Scaffold	SC	SAMEA1028746	GCA_001111285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/285/GCA_001111285.1_7004_5_19	-	SMRU2875
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.19511	39.6	-	CPQR01	122	2395	2181	3/22/15	3/4/17	Scaffold	SC	SAMEA1408293	GCA_001111345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/345/GCA_001111345.1_7444_8_6	-	9605+07141
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.34885	65.5	-	CIIX01	180	4343	4056	4/21/15	3/11/17	Scaffold	SC	SAMEA1019274	GCA_001328255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/255/GCA_001328255.1_7054_1_9	-	Bir 408
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.23642	50.4	-	CYBU01	153	5633	5164	8/22/15	2/24/17	Contig	SC	SAMEA1466119	GCA_001286005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/005/GCA_001286005.1_7790_1_62	-	402480_aEPEC
"Salmonella enterica subsp. enterica serovar 4,[5],12:r:-"	1192775	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.86599	52.2	-	MXJH01	64	4994	4762	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367845	GCA_002033205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/205/GCA_002033205.1_ASM203320v1	-	BCW_2031
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.83846	32.9	-	LKWP01	180	3019	2712	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893255	GCA_002273455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/455/GCA_002273455.1_ISU-916_v1.0	-	ST398:ISU 916
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.80329	32.9	-	LKWQ01	118	2955	2690	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893256	GCA_002273475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/475/GCA_002273475.1_ISU-917_v1.0	-	ST398:ISU 917
Salmonella enterica subsp. enterica serovar Agona	58095	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83936	52.1	-	MXJK01	42	4904	4663	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367842	GCA_002033225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/225/GCA_002033225.1_ASM203322v1	-	BCW_2028
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.06941	50.6	-	CYCV01	93	5421	5008	8/22/15	2/24/17	Contig	SC	SAMEA1531049	GCA_001286025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/025/GCA_001286025.1_8205_3_11	-	402924
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32336	65.4	-	CHBA01	176	4330	4014	4/21/15	3/11/17	Scaffold	SC	SAMEA1019300	GCA_001328275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/275/GCA_001328275.1_6540_6_14	-	Bir 249
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.17812	39.5	-	CPUE01	74	2406	2185	3/23/15	3/4/17	Scaffold	SC	SAMEA682565	GCA_001111445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/445/GCA_001111445.1_5392_6_8	-	spnIC187
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.04273	39.5	-	CRKT01	75	2236	2014	3/23/15	3/4/17	Scaffold	SC	SAMEA1025620	GCA_001111465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/465/GCA_001111465.1_6753_4_2	-	SMRU1538
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31252	65.3	-	CIKT01	168	4320	4017	4/21/15	3/11/17	Scaffold	SC	SAMEA1019302	GCA_001328295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/295/GCA_001328295.1_6540_8_19	-	Bir 304
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.45395	50.4	-	CYBA01	340	6010	5507	8/22/15	2/24/17	Contig	SC	SAMEA1466174	GCA_001286165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/165/GCA_001286165.1_7748_7_44	-	700495
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72118	52.2	-	MXJL01	218	4872	4517	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367840	GCA_002033235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/235/GCA_002033235.1_ASM203323v1	-	BCW_2026
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.82542	32.9	-	LKWR01	113	2975	2706	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893257	GCA_002273495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/495/GCA_002273495.1_ISU-918_v1.0	-	ST398:ISU 918
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.78203	32.9	-	LKWT01	177	2935	2649	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893259	GCA_002273525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/525/GCA_002273525.1_ISU-920_v1.0	-	ST398:ISU 920
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69938	52.1	-	MXJP01	40	4820	4540	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357023	GCA_002033255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/255/GCA_002033255.1_ASM203325v1	-	BCW_2020
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.09131	50.7	-	CYCM01	176	5511	5029	8/22/15	2/24/17	Contig	SC	SAMEA1466100	GCA_001286185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/185/GCA_001286185.1_7790_1_77	-	102366_aEPEC
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28346	65.3	-	CHAY01	175	4297	4008	4/21/15	3/11/17	Scaffold	SC	SAMEA1019313	GCA_001328315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/315/GCA_001328315.1_6540_8_20	-	Bir 305
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.06128	39.8	-	CPSG01	140	2203	2033	3/23/15	3/4/17	Scaffold	SC	SAMEA682418	GCA_001111505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/505/GCA_001111505.1_5366_7_7	-	08B10803
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.06295	39.5	-	CKSO01	57	2282	2040	3/21/15	3/4/17	Scaffold	SC	SAMEA1025551	GCA_001111565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/565/GCA_001111565.1_6807_3_14	-	23A
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29389	65.3	-	CFKK01	188	4325	3943	3/15/15	3/11/17	Scaffold	SC	SAMEA961569	GCA_001328335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/335/GCA_001328335.1_6174_2_8	-	Bir 69
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.33162	50.6	-	CXZQ01	116	5679	5316	8/22/15	2/24/17	Contig	SC	SAMEA1466161	GCA_001286225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/225/GCA_001286225.1_7748_7_29	-	500858_aEPEC
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69566	52.1	-	MXJT01	37	4813	4549	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357019	GCA_002033285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/285/GCA_002033285.1_ASM203328v1	-	BCW_2016
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.81745	32.9	-	LKWS01	140	2971	2714	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893258	GCA_002273535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/535/GCA_002273535.1_ISU-919_v1.0	-	ST398:ISU 919
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.80949	32.9	-	LKWV01	71	2947	2709	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893261	GCA_002273545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/545/GCA_002273545.1_ISU-924_v1.0	-	ST398:ISU 924
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69874	52.1	-	MXJQ01	55	4806	4555	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357022	GCA_002033295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/295/GCA_002033295.1_ASM203329v1	-	BCW_2019
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.09062	50.7	-	CYAL01	219	5520	5020	8/22/15	2/24/17	Contig	SC	SAMEA1466107	GCA_001286365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/365/GCA_001286365.1_7748_7_22	-	402248_aEPEC
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31295	65.4	-	CFJC01	162	4311	4006	3/15/15	3/11/17	Scaffold	SC	SAMEA961590	GCA_001328355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/355/GCA_001328355.1_6174_6_8	-	Bir 81
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.04514	39.6	-	CMBQ01	43	2239	1991	3/21/15	3/6/17	Scaffold	SC	SAMEA1029427	GCA_001111585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/585/GCA_001111585.1_7004_7_59	-	SMRU2891
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.0911	39.5	-	CMBC01	57	2290	2061	3/21/15	3/4/17	Scaffold	SC	SAMEA1029151	GCA_001111605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/605/GCA_001111605.1_7004_6_37	-	SMRU2845
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30444	65.4	-	CIIK01	159	4307	4002	4/21/15	3/11/17	Scaffold	SC	SAMEA961595	GCA_001328375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/375/GCA_001328375.1_6174_6_7	-	Bir 80
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.15928	50.6	-	CYAT01	229	5573	5140	8/22/15	2/24/17	Contig	SC	SAMEA1466186	GCA_001286385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/385/GCA_001286385.1_7748_7_24	-	402770_aEPEC
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.54325	52.3	-	MXJZ01	35	4569	4344	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357012	GCA_002033325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/325/GCA_002033325.1_ASM203332v1	-	BCW_2005
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.80776	32.9	-	LKXC01	140	2943	2705	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893268	GCA_002273585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/585/GCA_002273585.1_ISU-934_v1.0	-	ST5:ISU 934
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.82752	32.8	-	LKWY01	146	2983	2746	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893264	GCA_002273605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/605/GCA_002273605.1_ISU-928_v1.0	-	ST5:ISU 928
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69737	52.1	-	MXJU01	39	4807	4538	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357018	GCA_002033335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/335/GCA_002033335.1_ASM203333v1	-	BCW_2015
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.78794	50.7	-	CYGH01	28	4942	4654	8/25/15	2/25/17	Contig	SC	SAMEA1466098	GCA_001286465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/465/GCA_001286465.1_7748_7_3	-	100600_aEPEC
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29734	65.4	-	CFMF01	157	4290	3996	3/15/15	3/11/17	Scaffold	SC	SAMEA961599	GCA_001328395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/395/GCA_001328395.1_6280_4_4	-	Bir 113
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12311	39.6	-	CMML01	43	2357	2113	3/22/15	3/4/17	Scaffold	SC	SAMEA1029296	GCA_001111625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/625/GCA_001111625.1_7068_4_12	-	SMRU3132
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.00245	39.7	-	CLHM01	58	2165	1948	3/21/15	3/4/17	Scaffold	SC	SAMEA1025917	GCA_001111665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/665/GCA_001111665.1_6925_5_17	-	SMRU2177
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29111	65.4	-	CFHY01	153	4299	4007	3/15/15	3/11/17	Scaffold	SC	SAMEA961603	GCA_001328415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/415/GCA_001328415.1_6280_4_8	-	Bir 117
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.73552	50.6	-	CYGK01	30	4819	4552	8/25/15	2/24/17	Contig	SC	SAMEA1531051	GCA_001286565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/565/GCA_001286565.1_8205_3_43	-	155388
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.93148	51.9	-	MXKC01	391	5004	4732	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357009	GCA_002033365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/365/GCA_002033365.1_ASM203336v1	-	BCW_2001
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.76828	32.9	-	LKXD01	192	2902	2664	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893269	GCA_002273615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/615/GCA_002273615.1_ISU-935_v1.0	-	ST5:ISU 935
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.7863	32.8	-	LKWZ01	91	2904	2713	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893265	GCA_002273625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/625/GCA_002273625.1_ISU-930_v1.0	-	ST5:ISU 930
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.59364	52.3	-	MXKE01	33	4637	4411	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357007	GCA_002033375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/375/GCA_002033375.1_ASM203337v1	-	BCW_1999
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.79112	50.5	-	CYGJ01	49	4930	4650	8/25/15	2/24/17	Contig	SC	SAMEA1531053	GCA_001286605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/605/GCA_001286605.1_8205_3_1	-	200499
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31337	65.4	-	CFHZ01	157	4309	4000	3/15/15	3/11/17	Scaffold	SC	SAMEA961604	GCA_001328435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/435/GCA_001328435.1_6280_4_9	-	Bir 118
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09534	39.6	-	CKIG01	70	2311	2067	3/21/15	3/10/17	Scaffold	SC	SAMEA1024010	GCA_001111845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/845/GCA_001111845.1_6631_3_5	-	14
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.16684	39.8	-	CPQU01	301	2379	2109	3/22/15	3/11/17	Scaffold	SC	SAMEA682592	GCA_001111925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/925/GCA_001111925.1_5392_6_6	-	spnIC176
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32417	65.4	-	CHAW01	251	4358	4028	4/21/15	3/11/17	Scaffold	SC	SAMEA961608	GCA_001328455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/455/GCA_001328455.1_5237_2_2	-	BIR-02
Escherichia coli KRX	1452720	PRJEB10632	295379	Proteobacteria	Gammaproteobacteria	4.62356	50.7	-	CYPX01	103	4771	4490	9/10/15	2/24/17	Contig	CEBITEC	SAMEA3522203	GCA_001291365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/365/GCA_001291365.1_KRX	-	-
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.71402	52.1	-	MXKH01	39	4834	4582	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357004	GCA_002033395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/395/GCA_002033395.1_ASM203339v1	-	BCW_1996
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.70083	32.9	-	LKXF01	154	2823	2597	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893271	GCA_002273665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/665/GCA_002273665.1_ISU-939_v1.0	-	ST5:ISU 939
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.71976	32.9	-	LKXI01	145	2819	2615	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893274	GCA_002273685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/685/GCA_002273685.1_ISU-943_v1.0	-	ST5:ISU 943
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72071	52.1	-	MXKI01	56	4754	4507	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357003	GCA_002033415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/415/GCA_002033415.1_ASM203341v1	-	BCW_1995
Escherichia coli	562	PRJNA295412	295412	Proteobacteria	Gammaproteobacteria	5.18843	50.4	-	LJXW01	104	5395	4985	10/5/15	2/24/17	Contig	UC Davis	SAMN04054009	GCA_001306575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/575/GCA_001306575.1_JA09	26798108	UCD-JA09
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32202	65.4	-	CFSH01	223	4320	4043	3/15/15	3/11/17	Scaffold	SC	SAMEA961610	GCA_001328475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/475/GCA_001328475.1_5237_2_1	-	BIR-01
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.1432	39.4	-	CPQT01	240	2349	2110	3/22/15	3/10/17	Scaffold	SC	SAMEA1020051	GCA_001112045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/045/GCA_001112045.1_6678_3_17	-	SN33007
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.04048	39.7	-	CLPL01	57	2228	1977	3/21/15	3/11/17	Scaffold	SC	SAMEA1028822	GCA_001112105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/105/GCA_001112105.1_6949_3_16	-	SMRU2464
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29093	65.4	-	CFSB01	144	4281	4008	3/15/15	3/11/17	Scaffold	SC	SAMEA961622	GCA_001328495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/495/GCA_001328495.1_6174_8_9	-	Bir 94
Escherichia coli	562	PRJNA295417	295417	Proteobacteria	Gammaproteobacteria	5.20045	50.6	-	LJXZ01	63	5398	5030	10/5/15	2/24/17	Contig	UC Davis	SAMN04054193	GCA_001306585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/585/GCA_001306585.1_ASM130658v1	26798108	UCD-JA19
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.79275	52.1	-	MXKL01	29	4939	4683	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357000	GCA_002033445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/445/GCA_002033445.1_ASM203344v1	-	BCW_1992
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.75495	32.8	-	LKXG01	98	2859	2653	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893272	GCA_002273695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/695/GCA_002273695.1_ISU-940_v1.0	-	ST5:ISU 940
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.6924	33	-	LKXH01	134	2794	2599	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893273	GCA_002273705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/705/GCA_002273705.1_ISU-941_v1.0	-	ST5:ISU 941
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.71233	52.1	-	MXKJ01	37	4743	4503	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357002	GCA_002033455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/455/GCA_002033455.1_ASM203345v1	-	BCW_1994
Escherichia coli	562	PRJNA295421	295421	Proteobacteria	Gammaproteobacteria	5.46172	50.7	-	LJYB01	147	5900	5430	10/5/15	2/24/17	Contig	UC Davis	SAMN04054196	GCA_001306605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/605/GCA_001306605.1_ASM130660v1	26798108	UCD-JA33
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31475	65.4	-	CFKL01	135	4298	4010	3/15/15	3/11/17	Scaffold	SC	SAMEA961642	GCA_001328515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/515/GCA_001328515.1_6221_2_6	-	Bir 29
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.23481	39.9	-	CPMW01	70	2387	2162	3/23/15	3/11/17	Scaffold	SC	SAMEA1020235	GCA_001112165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/165/GCA_001112165.1_6187_7_23	-	DE_10
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10734	39.7	-	CLUI01	87	2343	2101	3/21/15	3/10/17	Scaffold	SC	SAMEA1025841	GCA_001112245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/245/GCA_001112245.1_6983_2_17	-	SMRU2225
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28398	65.3	-	CFRW01	202	4302	3961	3/15/15	3/11/17	Scaffold	SC	SAMEA961645	GCA_001328535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/535/GCA_001328535.1_6221_2_4	-	Bir 26
Escherichia coli	562	PRJNA295423	295423	Proteobacteria	Gammaproteobacteria	5.17584	50.6	-	LJYD01	120	5407	5064	10/5/15	2/24/17	Contig	UC Davis	SAMN04054198	GCA_001306635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/635/GCA_001306635.1_ASM130663v1	26798108	UCD-JA38
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72422	52.2	-	MXKM01	26	4833	4540	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356999	GCA_002033485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/485/GCA_002033485.1_ASM203348v1	-	BCW_1991
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.68322	33	-	LKXJ01	264	2847	2568	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893275	GCA_002273725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/725/GCA_002273725.1_ISU-944_v1.0	-	ST5:ISU 944
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.76822	32.8	-	LKXK01	80	2875	2677	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893276	GCA_002273755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/755/GCA_002273755.1_ISU-946_v1.0	-	ST5:ISU 946
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.81701	52.1	-	MXKN01	45	4966	4684	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356998	GCA_002033505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/505/GCA_002033505.1_ASM203350v1	-	BCW_1990
Escherichia coli	562	PRJNA295939	295939	Proteobacteria	Gammaproteobacteria	5.05871	50.7	-	LJXX01	83	5321	4939	10/5/15	2/24/17	Contig	UC Davis	SAMN04054189	GCA_001306655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/655/GCA_001306655.1_JA16	26798108	UCD-JA16
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.27201	65.3	-	CHWN01	187	4314	3976	4/21/15	3/11/17	Scaffold	SC	SAMEA961654	GCA_001328555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/555/GCA_001328555.1_6221_3_1	-	Bir 37
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10031	39.6	-	CLPU01	64	2313	2093	3/21/15	3/11/17	Scaffold	SC	SAMEA1028860	GCA_001112285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/285/GCA_001112285.1_6949_3_4	-	SMRU2452
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.00286	39.8	-	CRKP01	75	2233	2023	3/22/15	3/11/17	Scaffold	SC	SAMEA1025259	GCA_001112485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/485/GCA_001112485.1_6753_4_15	-	SMRU1551
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.33214	65.4	-	CHZH01	216	4323	4009	4/21/15	3/11/17	Scaffold	SC	SAMEA787703	GCA_001345075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/075/GCA_001345075.1_6180_1_8	-	A70655
Escherichia coli	562	PRJNA295416	295416	Proteobacteria	Gammaproteobacteria	5.46919	50.6	-	LJXY01	201	5916	5438	10/5/15	2/24/17	Contig	UC Davis	SAMN04054192	GCA_001306675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/675/GCA_001306675.1_JA18	26798108	UCD-JA18
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.55084	52.3	-	MXKO01	60	4624	4372	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356997	GCA_002033515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/515/GCA_002033515.1_ASM203351v1	-	BCW_1989
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.76096	32.9	-	LKXN01	126	2870	2680	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893279	GCA_002273785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/785/GCA_002273785.1_ISU-949_v1.0	-	ST5:ISU 949
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.61834	33	-	LKXL01	164	2764	2503	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893277	GCA_002273795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/795/GCA_002273795.1_ISU-947_v1.0	-	ST5:ISU 947
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80564	52.1	-	MXKP01	41	4952	4685	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356996	GCA_002033525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/525/GCA_002033525.1_ASM203352v1	-	BCW_1988
Escherichia coli	562	PRJNA295420	295420	Proteobacteria	Gammaproteobacteria	5.11761	50.4	-	LJYA01	81	5249	4922	10/5/15	2/24/17	Contig	UC Davis	SAMN04054195	GCA_001306685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/685/GCA_001306685.1_ASM130668v1	26798108	UCD-JA30
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.31333	65.4	-	CGCA01	221	4327	4024	3/15/15	3/11/17	Scaffold	SC	SAMEA787704	GCA_001345095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/095/GCA_001345095.1_6180_1_7	-	A70645
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04894	39.5	-	CKCG01	62	2250	2026	3/21/15	3/11/17	Scaffold	SC	SAMEA1024002	GCA_001112505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/505/GCA_001112505.1_6593_4_24	-	15B
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.09	39.6	-	CMAJ01	47	2297	2073	3/21/15	3/11/17	Scaffold	SC	SAMEA1029093	GCA_001112525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/525/GCA_001112525.1_7004_5_3	-	SMRU2859
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.35588	65.4	-	CGBW01	172	4334	4029	3/15/15	3/11/17	Scaffold	SC	SAMEA787707	GCA_001345115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/115/GCA_001345115.1_6180_1_6	-	A70620
Escherichia coli	562	PRJNA295422	295422	Proteobacteria	Gammaproteobacteria	5.43888	50.7	-	LJYC01	192	5936	5401	10/5/15	2/24/17	Contig	UC Davis	SAMN04054197	GCA_001306715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/715/GCA_001306715.1_ASM130671v1	26798108	UCD-JA37
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69644	52.1	-	MXKQ01	39	4808	4554	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356995	GCA_002033565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/565/GCA_002033565.1_ASM203356v1	-	BCW_1987
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.76693	32.9	-	LKXP01	153	2931	2676	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893281	GCA_002273825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/825/GCA_002273825.1_ISU-952_v1.0	-	ST5:ISU 952
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.79478	32.8	-	LKXQ01	115	2907	2689	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893282	GCA_002273835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/835/GCA_002273835.1_ISU-953_v1.0	-	ST5:ISU 953
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69814	52.1	-	MXKT01	41	4811	4555	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356992	GCA_002033585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/585/GCA_002033585.1_ASM203358v1	-	BCW_1984
Escherichia coli	562	PRJNA287968	287968	Proteobacteria	Gammaproteobacteria	4.84002	51	-	LJDY02	1107	5387	4662	10/15/15	2/25/17	Contig	University of KwaZulu Natal	SAMN04011432	GCA_001316875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/316/875/GCA_001316875.2_v02	-	ST167:947385799
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.26932	65.3	-	CHZG01	330	4396	3946	4/21/15	3/11/17	Scaffold	SC	SAMEA787718	GCA_001345135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/135/GCA_001345135.1_6280_7_8	-	A70011_6
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.14043	39.6	-	CLKC01	98	2370	2107	3/21/15	3/10/17	Scaffold	SC	SAMEA1028972	GCA_001112545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/545/GCA_001112545.1_6925_8_7	-	SMRU2527
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11567	39.7	-	CLDO01	90	2280	2025	3/21/15	3/11/17	Scaffold	SC	SAMEA1025963	GCA_001112585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/585/GCA_001112585.1_6899_5_18	-	SMRU2058
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.2485	65.2	-	CIFK01	464	4431	3896	4/21/15	3/11/17	Scaffold	SC	SAMEA787720	GCA_001345155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/155/GCA_001345155.1_6280_7_10	-	A70416
Escherichia coli	562	PRJEB8306	276436	Proteobacteria	Gammaproteobacteria	5.27689	51.1	-	CDRY01	649	5839	5075	2/24/15	2/24/17	Contig	CGS-GL	SAMEA3218066	GCA_001373235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/235/GCA_001373235.1_26A_L2_assembly	-	26A_L2
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69643	52.1	-	MXKS01	38	4795	4552	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356993	GCA_002033595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/595/GCA_002033595.1_ASM203359v1	-	BCW_1985
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.79379	32.9	-	LKXU01	392	3090	2669	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893286	GCA_002273845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/845/GCA_002273845.1_ISU-961_v1.0	-	ST5:ISU 961
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.80228	32.9	-	LKXT01	160	2948	2699	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893285	GCA_002273875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/875/GCA_002273875.1_ISU-960_v1.0	-	ST5:ISU 960
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69699	52.1	-	MXKU01	34	4807	4550	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356991	GCA_002033625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/625/GCA_002033625.1_ASM203362v1	-	BCW_1983
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.69255	50.9	-	JRRO01	528	4929	4522	10/26/15	2/24/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02872746	GCA_001412895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/895/GCA_001412895.1_ASM141289v1	25501822	RU1 MA6
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.28153	65.3	-	CFNZ01	233	4334	3964	3/15/15	3/11/17	Scaffold	SC	SAMEA787721	GCA_001345175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/175/GCA_001345175.1_6280_7_9	-	A70387
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1112	39.6	-	CKZS01	75	2325	2102	3/21/15	3/11/17	Scaffold	SC	SAMEA1026023	GCA_001112605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/605/GCA_001112605.1_6840_1_8	-	SMRU1760
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.04699	39.5	-	CRSP01	73	2243	2028	3/22/15	3/10/17	Scaffold	SC	SAMEA1025652	GCA_001112645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/645/GCA_001112645.1_6805_3_14	-	SMRU1454
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.19307	65.2	-	CGCN01	551	4456	3881	3/15/15	3/11/17	Scaffold	SC	SAMEA787722	GCA_001345195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/195/GCA_001345195.1_6280_8_2	-	A70441
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.69607	50.9	-	JRRQ01	403	4846	4537	10/26/15	2/24/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02872748	GCA_001412915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/412/915/GCA_001412915.1_ASM141291v1	25501822	RU1 MA8
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.54302	52.3	-	MXKZ01	67	4611	4354	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356986	GCA_002033645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/645/GCA_002033645.1_ASM203364v1	-	BCW_1978
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.77325	32.8	-	LKXW01	118	2894	2670	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893288	GCA_002273905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/905/GCA_002273905.1_ISU-963_v1.0	-	ST5:ISU 963
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.83499	32.8	-	LKXX01	125	3000	2742	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893289	GCA_002273915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/915/GCA_002273915.1_ISU-964_v1.0	-	ST5:ISU 964
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.81553	52.1	-	MXKV01	54	4903	4655	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356990	GCA_002033655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/655/GCA_002033655.1_ASM203365v1	-	BCW_1982
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.69814	50.9	-	JRRI01	106	4849	4544	10/26/15	2/24/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02872721	GCA_001413005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/005/GCA_001413005.1_AssemblyName	25501822	RU1
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.31117	65.4	-	CGGG01	166	4313	4028	3/15/15	3/11/17	Scaffold	SC	SAMEA787727	GCA_001345215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/215/GCA_001345215.1_6180_2_7	-	A70769
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.04417	39.7	-	CKUV01	51	2247	2025	3/21/15	3/11/17	Scaffold	SC	SAMEA1025700	GCA_001112685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/685/GCA_001112685.1_6823_3_11	-	SMRU1907
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.03456	39.7	-	CPPQ01	63	2251	1989	3/23/15	3/6/17	Scaffold	SC	SAMEA1020284	GCA_001112725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/725/GCA_001112725.1_6237_8_4	-	DG_02
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.34684	65.5	-	CGGI01	201	4332	4024	3/15/15	3/11/17	Scaffold	SC	SAMEA787728	GCA_001345235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/235/GCA_001345235.1_6180_2_8	-	A70780
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.67835	50.9	-	JRRK01	364	4798	4517	10/26/15	2/24/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02872742	GCA_001413375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/375/GCA_001413375.1_ASM141337v1	25501822	RU1 MA2
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.74855	52.1	-	MXKX01	48	4842	4599	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356988	GCA_002033665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/665/GCA_002033665.1_ASM203366v1	-	BCW_1980
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.74206	32.8	-	LKXZ01	172	2880	2634	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893291	GCA_002273945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/945/GCA_002273945.1_ISU-969_v1.0	-	ST5:ISU 969
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.7093	32.9	-	LKYB01	187	2848	2571	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893293	GCA_002273955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/955/GCA_002273955.1_ISU-971_v1.0	-	ST5:ISU 971
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.0524	52.1	-	MXLA01	89	5257	4907	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356985	GCA_002033685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/685/GCA_002033685.1_ASM203368v1	-	BCW_1977
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.68805	50.9	-	JRRL01	375	4837	4535	10/26/15	2/24/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02872743	GCA_001413395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/395/GCA_001413395.1_ASM141339v1	25501822	RU1 MA3
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.28545	65.3	-	CFKG01	270	4370	3954	3/15/15	3/11/17	Scaffold	SC	SAMEA787733	GCA_001345255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/255/GCA_001345255.1_6280_8_5	-	A70458
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.08235	39.6	-	CKEB01	105	2300	2071	3/21/15	3/4/17	Scaffold	SC	SAMEA1023999	GCA_001112745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/745/GCA_001112745.1_6630_1_5	-	4
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.13383	39.6	-	CLVH01	61	2349	2089	3/21/15	3/4/17	Scaffold	SC	SAMEA1026240	GCA_001112765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/765/GCA_001112765.1_6983_3_66	-	SMRU2274
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.29942	65.3	-	CIFN01	212	4325	3972	4/21/15	3/11/17	Scaffold	SC	SAMEA787734	GCA_001345275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/275/GCA_001345275.1_6280_8_6	-	A70480
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.67748	50.9	-	JRRR01	415	4840	4521	10/26/15	2/24/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02872749	GCA_001413475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/475/GCA_001413475.1_ASM141347v1	25501822	RU1 MA9
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.76809	52.3	-	MXLB01	80	4878	4623	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356984	GCA_002033725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/725/GCA_002033725.1_ASM203372v1	-	BCW_1976
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.55615	33.1	-	LKYC01	216	2677	2440	8/28/17	8/28/17	Scaffold	USDA-ARS	SAMN03893294	GCA_002273975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/975/GCA_002273975.1_ISU-972_v1.0	-	ST5:ISU 972
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.54915	33	-	LKYE01	261	2652	2395	8/28/17	8/28/17	Scaffold	USDA-ARS	SAMN03893296	GCA_002273995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/273/995/GCA_002273995.1_ISU-976_v1.0	-	ST5:ISU 976
"Salmonella enterica subsp. houtenae serovar 48:g,z51:-"	1050190	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83961	51.4	-	MXLE01	673	4675	4328	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367818	GCA_002033735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/735/GCA_002033735.1_ASM203373v1	-	343-86
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.68941	50.9	-	JRRT01	376	4826	4532	10/26/15	2/24/17	Contig	US Army Edgewood Chemical Biological Center	SAMN02872751	GCA_001413515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/515/GCA_001413515.1_ASM141351v1	25501822	RU1 MA11
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.24765	65.2	-	CHDU01	420	4416	3929	4/21/15	3/11/17	Scaffold	SC	SAMEA787735	GCA_001345295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/295/GCA_001345295.1_6280_7_3	-	A70067_2
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.09983	39.7	-	CLXY01	50	2333	2089	3/21/15	3/4/17	Scaffold	SC	SAMEA1028931	GCA_001112905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/905/GCA_001112905.1_6983_6_34	-	SMRU2338
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.0499	39.7	-	CPUR01	60	2276	2013	3/22/15	3/4/17	Scaffold	SC	SAMEA1020285	GCA_001112985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/985/GCA_001112985.1_6246_3_16	-	LMG1278
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.29726	65.3	-	CIFP01	300	4404	3931	4/21/15	3/11/17	Scaffold	SC	SAMEA787737	GCA_001345315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/315/GCA_001345315.1_6280_8_9	-	A70451
Escherichia coli	562	PRJNA293513	293513	Proteobacteria	Gammaproteobacteria	5.28343	50.6	-	LIQA01	206	5547	5167	10/26/15	2/24/17	Contig	University of Copenhagen	SAMN04005265	GCA_001413995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/995/GCA_001413995.1_ASM141399v1	-	12
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69492	52.1	-	MXLC01	56	4801	4550	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356983	GCA_002033755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/755/GCA_002033755.1_ASM203375v1	-	BCW_1975
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.79384	32.8	-	LKYF01	188	2928	2687	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893297	GCA_002274015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/015/GCA_002274015.1_ISU-978_v1.0	-	ST5:ISU 978
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.70485	32.9	-	LKYG01	176	2832	2580	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893298	GCA_002274035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/035/GCA_002274035.1_ISU-979_v1.0	-	ST5:ISU 979
"Salmonella enterica subsp. houtenae serovar 48:g,z51:-"	1050190	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.68749	51.7	-	MXLF01	127	4655	4316	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367817	GCA_002033805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/805/GCA_002033805.1_ASM203380v1	-	481-85
Escherichia coli	562	PRJNA293513	293513	Proteobacteria	Gammaproteobacteria	4.7493	50.8	-	LIUW01	88	4841	4555	10/29/15	2/24/17	Contig	University of Copenhagen	SAMN04009847	GCA_001419785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/785/GCA_001419785.1_ASM141978v1	-	33
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.21646	65.3	-	CHZF01	423	4390	3879	4/21/15	3/11/17	Scaffold	SC	SAMEA787738	GCA_001345335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/335/GCA_001345335.1_6280_8_10	-	A70012
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.14057	39.5	-	CMHU01	33	2326	2060	3/23/15	3/6/17	Scaffold	SC	SAMEA1029385	GCA_001113005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/005/GCA_001113005.1_7038_6_15	-	SMRU2991
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.06034	39.8	-	CLAB01	61	2230	1981	3/21/15	3/4/17	Scaffold	SC	SAMEA1025992	GCA_001113045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/045/GCA_001113045.1_6840_3_21	-	SMRU1821
Mycobacterium tuberculosis	1773	PRJEB2424	204196	Terrabacteria group	Actinobacteria	4.27627	65.4	-	CGCP01	229	4335	4005	3/15/15	3/11/17	Scaffold	SC	SAMEA787752	GCA_001345355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/355/GCA_001345355.1_6180_2_1	-	A70657
Escherichia coli	562	PRJNA293513	293513	Proteobacteria	Gammaproteobacteria	4.79362	50.6	-	LIUX01	95	4938	4658	10/29/15	2/24/17	Contig	University of Copenhagen	SAMN04009848	GCA_001419825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/825/GCA_001419825.1_ASM141982v1	-	116
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.23188	52	-	MXLL01	477	5443	5094	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367760	GCA_002033825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/825/GCA_002033825.1_ASM203382v1	-	INSP 24
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.62005	33	-	LKYI01	142	2702	2513	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893300	GCA_002274055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/055/GCA_002274055.1_ISU-981_v1.0	-	ST5:ISU 981
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.47459	33.3	-	LKYJ01	272	2567	2306	8/28/17	8/28/17	Scaffold	USDA-ARS	SAMN03893301	GCA_002274085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/085/GCA_002274085.1_ISU-982_v1.0	-	ST5:ISU 982
"Salmonella enterica subsp. houtenae serovar 48:g,z51:-"	1050190	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.68294	51.6	-	MXLG01	92	4706	4357	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367813	GCA_002033835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/835/GCA_002033835.1_ASM203383v1	-	234-85
Escherichia coli	562	PRJNA293513	293513	Proteobacteria	Gammaproteobacteria	4.90902	50.7	-	LIUY01	105	5102	4811	10/29/15	2/24/17	Contig	University of Copenhagen	SAMN04009850	GCA_001419845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/845/GCA_001419845.1_ASM141984v1	-	117
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.38072	65.6	-	CGHY01	90	4298	4102	3/15/15	3/11/17	Scaffold	SC	SAMEA1317624	GCA_001350495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/495/GCA_001350495.1_7414_6_9	-	400711
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.05601	39.5	-	CQZH01	73	2274	2045	3/23/15	3/4/17	Scaffold	SC	SAMEA1024686	GCA_001113085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/085/GCA_001113085.1_6730_5_16	-	SMRU664
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.04164	39.7	-	CQVB01	34	2233	1987	3/22/15	3/6/17	Scaffold	SC	SAMEA1025314	GCA_001113225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/225/GCA_001113225.1_6710_7_16	-	SMRU1384
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.37113	65.6	-	CGGF01	85	4267	4076	3/15/15	3/11/17	Scaffold	SC	SAMEA1317625	GCA_001350515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/515/GCA_001350515.1_7414_6_28	-	300659
Escherichia coli	562	PRJNA293513	293513	Proteobacteria	Gammaproteobacteria	5.15478	50.6	-	LIUZ01	171	5454	5063	10/29/15	2/24/17	Contig	University of Copenhagen	SAMN04009854	GCA_001419865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/865/GCA_001419865.1_ASM141986v1	-	146
Salmonella enterica subsp. enterica serovar Stanley	192953	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.78559	52.2	-	MXLM01	50	4898	4662	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367755	GCA_002033845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/845/GCA_002033845.1_ASM203384v1	-	DMS 1112
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.83693	32.8	-	LKYK01	85	2965	2765	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893302	GCA_002274095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/095/GCA_002274095.1_ISU-983_v1.0	-	ST5:ISU 983
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.52448	33	-	LKYL01	259	2607	2394	8/28/17	8/28/17	Scaffold	USDA-ARS	SAMN03893303	GCA_002274115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/115/GCA_002274115.1_ISU-992_v1.0	-	ST5:ISU 992
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.74304	52.1	-	MXLN01	35	4872	4440	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356981	GCA_002033885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/885/GCA_002033885.1_ASM203388v1	-	BCW_1877
Escherichia coli	562	PRJNA293513	293513	Proteobacteria	Gammaproteobacteria	4.98423	50.6	-	LIVA01	239	5342	4875	10/29/15	2/24/17	Contig	University of Copenhagen	SAMN04009856	GCA_001419885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/885/GCA_001419885.1_ASM141988v1	-	152
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36227	65.6	-	CIFO01	87	4276	4094	4/21/15	3/11/17	Scaffold	SC	SAMEA1317636	GCA_001350535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/535/GCA_001350535.1_7414_6_56	-	402321
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.24388	39.5	-	CIMA01	96	2497	2241	3/21/15	3/4/17	Scaffold	SC	SAMEA1023927	GCA_001113245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/245/GCA_001113245.1_6631_1_3	-	6A
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.13256	39.4	-	CLMW01	56	2351	2107	3/21/15	3/4/17	Scaffold	SC	SAMEA1028642	GCA_001113265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/265/GCA_001113265.1_6938_7_23	-	SMRU2711
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.37533	65.6	-	CGCR01	74	4277	4105	3/15/15	3/11/17	Scaffold	SC	SAMEA1317639	GCA_001350555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/555/GCA_001350555.1_7414_6_12	-	302226
Escherichia coli	562	PRJNA293513	293513	Proteobacteria	Gammaproteobacteria	4.69976	50.8	-	LIVB01	123	4851	4527	10/29/15	2/24/17	Contig	University of Copenhagen	SAMN04009857	GCA_001419895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/895/GCA_001419895.1_ASM141989v1	-	165
Salmonella enterica subsp. enterica serovar Paratyphi B	57045	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.75542	52.2	-	MXLP01	60	4807	4573	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367741	GCA_002033905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/905/GCA_002033905.1_ASM203390v1	-	DMS 106/76
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.6756	33	-	LKYM01	221	2826	2554	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893304	GCA_002274135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/135/GCA_002274135.1_ISU-993_v1.0	-	ST5:ISU 993
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.70867	32.9	-	LKYN01	199	2854	2606	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893305	GCA_002274155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/155/GCA_002274155.1_ISU-994_v1.0	-	ST5:ISU 994
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.8886	52	-	MXLR01	89	5047	4770	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367735	GCA_002033925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/925/GCA_002033925.1_ASM203392v1	-	INSP 15
Escherichia coli	562	PRJNA293513	293513	Proteobacteria	Gammaproteobacteria	4.77231	51	-	LIVC01	181	4979	4586	10/29/15	2/24/17	Contig	University of Copenhagen	SAMN04009859	GCA_001419925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/925/GCA_001419925.1_ASM141992v1	-	166
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.35701	65.6	-	CGBU01	110	4282	4076	3/15/15	3/11/17	Scaffold	SC	SAMEA1317642	GCA_001350575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/575/GCA_001350575.1_7414_6_38	-	402431
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.00863	39.7	-	CKGU01	63	2201	1926	3/21/15	3/11/17	Scaffold	SC	SAMEA1023893	GCA_001113305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/305/GCA_001113305.1_6631_1_16	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.33227	39.8	-	CKYA01	39	2363	2156	3/21/15	3/10/17	Scaffold	SC	SAMEA1026083	GCA_001113365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/365/GCA_001113365.1_6823_7_22	-	SMRU2014
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36089	65.6	-	CIKG01	112	4301	4090	4/21/15	3/11/17	Scaffold	SC	SAMEA1317668	GCA_001350635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/635/GCA_001350635.1_7414_6_41	-	401325
Escherichia coli	562	PRJNA293513	293513	Proteobacteria	Gammaproteobacteria	4.62252	50.9	-	LIVD01	157	4895	4422	10/29/15	2/24/17	Contig	University of Copenhagen	SAMN04009860	GCA_001419945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/945/GCA_001419945.1_ASM141994v1	-	199
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.82969	52.1	-	MXLS01	61	4943	4698	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356978	GCA_002033935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/935/GCA_002033935.1_ASM203393v1	-	BCW_1862
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.78644	32.8	-	LKYO01	149	2956	2709	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893306	GCA_002274175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/175/GCA_002274175.1_ISU-995_v1.0	-	ST5:ISU 995
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.7357	32.9	-	LKYP01	185	2890	2636	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893307	GCA_002274205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/205/GCA_002274205.1_ISU-996_v1.0	-	ST5:ISU 996
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.71552	52.2	-	MXLT01	61	4809	4562	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356977	GCA_002033945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/945/GCA_002033945.1_ASM203394v1	-	BCW_1861
Escherichia coli	562	PRJNA293513	293513	Proteobacteria	Gammaproteobacteria	5.16052	50.7	-	LIVE01	269	5512	5104	10/29/15	2/24/17	Contig	University of Copenhagen	SAMN04009862	GCA_001419965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/419/965/GCA_001419965.1_ASM141996v1	-	221
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.35923	65.6	-	CFNY01	94	4273	4090	3/15/15	3/11/17	Scaffold	SC	SAMEA1317673	GCA_001350675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/675/GCA_001350675.1_7414_6_52	-	302258
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15169	39.5	-	CKKB01	84	2405	2157	3/21/15	3/11/17	Scaffold	SC	SAMEA1024171	GCA_001113385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/385/GCA_001113385.1_6631_6_13	-	14
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.22292	39.4	-	CLIW01	77	2447	2207	3/21/15	3/11/17	Scaffold	SC	SAMEA1029026	GCA_001113405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/405/GCA_001113405.1_6925_7_17	-	SMRU2513
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36572	65.6	-	CHJV01	73	4274	4101	4/21/15	3/11/17	Scaffold	SC	SAMEA1523365	GCA_001350735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/735/GCA_001350735.1_8080_8_7	-	200625
Escherichia coli	562	PRJNA293513	293513	Proteobacteria	Gammaproteobacteria	4.87138	50.6	-	LIVH01	131	5113	4731	10/29/15	2/25/17	Contig	University of Copenhagen	SAMN04009872	GCA_001420045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/045/GCA_001420045.1_ASM142004v1	-	233
Salmonella enterica subsp. enterica serovar Miami	286780	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.14825	51.8	-	MXLU01	988	5100	4758	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367729	GCA_002033985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/985/GCA_002033985.1_ASM203398v1	-	IP 2/79
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.874	32.8	-	LKYS01	89	3023	2834	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893336	GCA_002274225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/225/GCA_002274225.1_UCI01_v1.0	-	ST5:UCI 1
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.81545	32.8	-	LKYQ01	102	2942	2726	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893308	GCA_002274235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/235/GCA_002274235.1_ISU-998_v1.0	-	ST5:ISU 998
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.63333	52.3	-	MXLV01	75	4703	4466	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356976	GCA_002033995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/995/GCA_002033995.1_ASM203399v1	-	BCW_1852
Escherichia coli	562	PRJNA293513	293513	Proteobacteria	Gammaproteobacteria	5.06232	50.7	-	LIVG01	169	5331	4949	10/29/15	2/25/17	Contig	University of Copenhagen	SAMN04009869	GCA_001420055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/055/GCA_001420055.1_ASM142005v1	-	228
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.35475	65.6	-	CGBM01	120	4277	4072	3/15/15	3/11/17	Scaffold	SC	SAMEA1523366	GCA_001350755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/755/GCA_001350755.1_8080_8_34	-	1700893
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.07315	39.5	-	CMAN01	52	2285	2046	3/21/15	3/10/17	Scaffold	SC	SAMEA1029162	GCA_001113465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/465/GCA_001113465.1_7004_5_9	-	SMRU2865
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.06459	39.5	-	CRIS01	66	2286	2051	3/23/15	3/11/17	Scaffold	SC	SAMEA1025170	GCA_001113505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/505/GCA_001113505.1_6753_1_14	-	SMRU1478
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.38519	65.6	-	CFLC01	84	4281	4089	3/15/15	3/11/17	Scaffold	SC	SAMEA1523369	GCA_001350775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/775/GCA_001350775.1_8080_8_9	-	200470
Escherichia coli	562	PRJNA293513	293513	Proteobacteria	Gammaproteobacteria	5.48132	50.5	-	LIVI01	250	5809	5378	10/29/15	2/25/17	Contig	University of Copenhagen	SAMN04009875	GCA_001420065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/065/GCA_001420065.1_ASM142006v1	-	304
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69239	52.2	-	MXLW01	87	4784	4516	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367719	GCA_002034005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/005/GCA_002034005.1_ASM203400v1	-	CDC SSU8074
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.69656	32.9	-	LKYT01	162	2891	2641	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893337	GCA_002274245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/245/GCA_002274245.1_UCI02_v1.0	-	ST5:UCI 2
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.84397	32.8	-	LKYW01	105	3032	2790	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893340	GCA_002274285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/285/GCA_002274285.1_UCI05_v1.0	-	ST5:UCI 5
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.65801	52.3	-	MXLX01	59	4744	4475	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356975	GCA_002034025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/025/GCA_002034025.1_ASM203402v1	-	BCW_1833
Escherichia coli	562	PRJNA293513	293513	Proteobacteria	Gammaproteobacteria	5.27712	50.6	-	LIVF01	213	5574	5192	10/29/15	2/25/17	Contig	University of Copenhagen	SAMN04009866	GCA_001420075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/075/GCA_001420075.1_ASM142007v1	-	224
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.37208	65.6	-	CGBK01	83	4297	4129	3/15/15	3/11/17	Scaffold	SC	SAMEA1523375	GCA_001350835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/835/GCA_001350835.1_8080_8_10	-	201113
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07379	39.5	-	CQZS01	53	2296	2034	3/23/15	3/11/17	Scaffold	SC	SAMEA1024751	GCA_001113645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/645/GCA_001113645.1_6730_5_5	-	SMRU653
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.03199	39.7	-	CLYX01	61	2218	1998	3/21/15	3/11/17	Scaffold	SC	SAMEA1028874	GCA_001113725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/725/GCA_001113725.1_6983_7_69	-	SMRU2373
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36489	65.6	-	CGCJ01	116	4289	4080	3/15/15	3/11/17	Scaffold	SC	SAMEA1523379	GCA_001350855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/855/GCA_001350855.1_8080_8_28	-	1500034
Escherichia coli	562	PRJNA293513	293513	Proteobacteria	Gammaproteobacteria	4.78502	50.8	-	LIVJ01	90	4983	4703	10/29/15	2/25/17	Contig	University of Copenhagen	SAMN04009878	GCA_001420125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/125/GCA_001420125.1_ASM142012v1	-	321
Salmonella enterica subsp. enterica serovar Paratyphi B	57045	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70919	52.2	-	MXMA01	113	4765	4530	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367695	GCA_002034065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/065/GCA_002034065.1_ASM203406v1	-	DMS 2471
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.7877	32.7	-	LKYX01	111	2920	2693	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893341	GCA_002274295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/295/GCA_002274295.1_UCI06_v1.0	-	ST5:UCI 6
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.8759	32.7	-	LKYY01	158	3087	2818	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893342	GCA_002274305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/305/GCA_002274305.1_UCI07_v1.0	-	ST5:UCI 7
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.60636	52.2	-	MXMB01	52	4613	4395	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356973	GCA_002034075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/075/GCA_002034075.1_ASM203407v1	-	BCW_1809
Escherichia coli	562	PRJNA293513	293513	Proteobacteria	Gammaproteobacteria	5.00525	50.5	-	LIVK01	117	5243	4957	10/29/15	2/25/17	Contig	University of Copenhagen	SAMN04009882	GCA_001420135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/135/GCA_001420135.1_ASM142013v1	-	447
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	4.36545	65.6	-	CGBD01	134	4279	4076	3/15/15	3/11/17	Scaffold	SC	SAMEA1523384	GCA_001350875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/875/GCA_001350875.1_8080_8_26	-	1301088
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.04776	39.6	-	CKTP01	60	2270	2008	3/21/15	3/11/17	Scaffold	SC	SAMEA1026112	GCA_001113845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/845/GCA_001113845.1_6823_1_7	-	SMRU1855
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.20717	39.5	-	CPOU01	101	2441	2196	3/23/15	3/10/17	Scaffold	SC	SAMEA1020234	GCA_001113885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/885/GCA_001113885.1_6187_7_11	-	LMG2888
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36259	65.6	-	COJO01	98	4287	4074	3/23/15	3/11/17	Scaffold	SC	SAMEA1015922	GCA_001375715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/715/GCA_001375715.1_6954_8_95	-	0157X
Escherichia coli	562	PRJNA293513	293513	Proteobacteria	Gammaproteobacteria	4.99375	50.7	-	LIVL01	149	5206	4861	10/29/15	2/25/17	Contig	University of Copenhagen	SAMN04009886	GCA_001420165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/420/165/GCA_001420165.1_ASM142016v1	-	449
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.81198	52	-	MXLY01	79	4955	4696	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356974	GCA_002034095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/095/GCA_002034095.1_ASM203409v1	-	BCW_1819
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.85417	32.8	-	LKYZ01	120	3025	2783	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893343	GCA_002274335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/335/GCA_002274335.1_UCI08_v1.0	-	ST5:UCI 8
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.90172	32.8	-	LKZJ01	205	3172	2768	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893353	GCA_002274365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/365/GCA_002274365.1_UCI18_v1.0	-	ST5:UCI 18
Salmonella enterica subsp. enterica serovar Paratyphi B	57045	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66322	52.2	-	MXLZ01	52	4721	4496	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367696	GCA_002034115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/115/GCA_002034115.1_ASM203411v1	-	DMS 59/81
Escherichia coli O157:H7	83334	PRJNA296762	296762	Proteobacteria	Gammaproteobacteria	5.38071	50.3	-	LKAK02	143	5797	5349	11/5/15	2/25/17	Contig	Technische Universitaet Muenchen	SAMN04103125	GCA_001432175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/175/GCA_001432175.2_WS4435_final_V2	27056239	WS4435
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36623	65.6	-	COGY01	109	4297	4085	3/23/15	3/11/17	Scaffold	SC	SAMEA1015929	GCA_001375735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/735/GCA_001375735.1_6954_1_86	-	0628J
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15754	39.5	-	CKGR01	62	2401	2152	3/21/15	3/10/17	Scaffold	SC	SAMEA1023965	GCA_001113965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/965/GCA_001113965.1_6631_1_12	-	14
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.22729	39.4	-	CLIQ01	71	2467	2193	3/21/15	3/10/17	Scaffold	SC	SAMEA1028884	GCA_001113985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/985/GCA_001113985.1_6925_7_1	-	SMRU2497
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39479	65.6	-	COFZ01	105	4304	4105	3/22/15	3/11/17	Scaffold	SC	SAMEA1015931	GCA_001375755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/755/GCA_001375755.1_6954_1_50	-	0166G
Escherichia coli O157:H7	83334	PRJNA296763	296763	Proteobacteria	Gammaproteobacteria	5.24964	50.3	-	LKAL01	195	5622	5200	11/5/15	2/25/17	Contig	Technische Universitaet Muenchen	SAMN04103127	GCA_001432195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/432/195/GCA_001432195.1_WS4678	27056239	WS4678
Salmonella enterica subsp. enterica serovar Paratyphi B	57045	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70961	52.2	-	MXMC01	110	4843	4561	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367685	GCA_002034145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/145/GCA_002034145.1_ASM203414v1	-	DMS 3254/7/81
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.8668	32.8	-	LKZB01	125	3055	2819	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893345	GCA_002274375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/375/GCA_002274375.1_UCI10_v1.0	-	ST5:UCI 10
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.87312	32.8	-	LKZH01	117	3064	2811	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893351	GCA_002274385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/385/GCA_002274385.1_UCI16_v1.0	-	ST5:UCI 16
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.76763	52.2	-	MXMD01	45	4886	4657	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356972	GCA_002034165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/165/GCA_002034165.1_ASM203416v1	-	BCW_1776
Escherichia coli O157:H7	83334	PRJNA301106	301106	Proteobacteria	Gammaproteobacteria	5.41185	50.5	-	LMXL01	98	5773	5344	11/6/15	2/25/17	Contig	IZSAM	SAMN04235870	GCA_001440045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/045/GCA_001440045.1_ASM144004v1	-	G10
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36861	65.6	-	COIG01	98	4279	4088	3/23/15	3/11/17	Scaffold	SC	SAMEA1015935	GCA_001375795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/795/GCA_001375795.1_6954_7_47	-	0910Q
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.14478	39.5	-	CMQF01	47	2372	2137	3/23/15	3/11/17	Scaffold	SC	SAMEA2061943	GCA_001114005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/005/GCA_001114005.1_9803_7_82	-	23F
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.2197	39.4	-	CKXD01	75	2451	2195	3/21/15	3/11/17	Scaffold	SC	SAMEA1025776	GCA_001114025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/025/GCA_001114025.1_6823_6_16	-	SMRU1984
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35562	65.6	-	COKV01	59	4250	4075	3/22/15	3/11/17	Scaffold	SC	SAMEA1015939	GCA_001375815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/815/GCA_001375815.1_6972_6_48	-	type strain: 0154
Escherichia coli	562	PRJNA294949	294949	Proteobacteria	Gammaproteobacteria	5.37811	50.6	-	LJZY01	143	5800	5301	11/6/15	2/25/17	Contig	LAU	SAMN04088938	GCA_001440495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/495/GCA_001440495.1_ASM144049v1	-	ECGM-D3374
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.86434	52.2	-	MXME01	84	4997	4751	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356971	GCA_002034175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/175/GCA_002034175.1_ASM203417v1	-	BCW_1769
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.89565	32.8	-	LKZL01	201	3159	2780	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893355	GCA_002274395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/395/GCA_002274395.1_UCI20_v1.0	-	ST5:UCI 20
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.71948	32.9	-	LKZQ01	125	2879	2672	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893360	GCA_002274445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/445/GCA_002274445.1_UCI25_v1.0	-	ST5:UCI 25
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.93983	52.1	-	MXMF01	103	5092	4831	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356970	GCA_002034185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/185/GCA_002034185.1_ASM203418v1	-	BCW_1760
Escherichia coli	562	PRJNA294950	294950	Proteobacteria	Gammaproteobacteria	5.31672	50.6	-	LJZZ01	188	5741	5230	11/6/15	2/25/17	Contig	LAU	SAMN04088940	GCA_001440525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/525/GCA_001440525.1_ASM144052v1	-	ECGM-EL2071
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39493	65.6	-	COHE01	107	4303	4114	3/23/15	3/11/17	Scaffold	SC	SAMEA1015940	GCA_001375835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/835/GCA_001375835.1_6954_1_88	-	0029H
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09762	39.6	-	CMLK01	68	2340	2094	3/22/15	3/11/17	Scaffold	SC	SAMEA1029388	GCA_001114045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/045/GCA_001114045.1_7054_6_11	-	SMRU3083
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.14158	39.8	-	CMUE01	117	2256	1974	3/23/15	3/11/17	Scaffold	SC	SAMEA1022765	GCA_001114065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/065/GCA_001114065.1_5737_6_1	-	141
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35604	65.6	-	COKC01	82	4266	4067	3/23/15	3/11/17	Scaffold	SC	SAMEA1015942	GCA_001375875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/875/GCA_001375875.1_6972_6_22	-	0386W
Escherichia coli	562	PRJNA295953	295953	Proteobacteria	Gammaproteobacteria	4.95009	50.4	-	LKPL01	300	5262	4816	11/6/15	2/25/17	Contig	University of Liege	SAMN04100673	GCA_001440685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/685/GCA_001440685.1_ASM144068v1	-	EH1332
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.87471	51.9	-	MXMG01	315	4936	4715	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367646	GCA_002034225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/225/GCA_002034225.1_ASM203422v1	-	NVSL 7095
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.75569	32.8	-	LKZW01	219	3002	2608	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893366	GCA_002274455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/455/GCA_002274455.1_UCI31_v1.0	-	ST5:UCI 31
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.88854	32.8	-	LKZX01	269	3238	2732	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893367	GCA_002274465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/465/GCA_002274465.1_UCI32_v1.0	-	ST5:UCI 32
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.01223	52.2	-	MXMH01	43	5130	4886	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356969	GCA_002034235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/235/GCA_002034235.1_ASM203423v1	-	BCW_1733
Escherichia coli	562	PRJNA295953	295953	Proteobacteria	Gammaproteobacteria	5.11916	50.4	-	LKDF01	373	5488	5002	11/6/15	2/25/17	Contig	University of Liege	SAMN04100675	GCA_001440725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/725/GCA_001440725.1_ASM144072v1	-	EH1813
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36759	65.6	-	COGM01	104	4287	4078	3/23/15	3/11/17	Scaffold	SC	SAMEA1015949	GCA_001375915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/915/GCA_001375915.1_6954_1_67	-	0519Q
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.02363	39.8	-	CPSQ01	214	2187	1987	3/23/15	3/11/17	Scaffold	SC	SAMEA682409	GCA_001114225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/225/GCA_001114225.1_5366_7_10	-	09B00208
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09392	39.5	-	CLKI01	66	2302	2073	3/21/15	3/4/17	Scaffold	SC	SAMEA1029206	GCA_001114405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/405/GCA_001114405.1_6938_3_26	-	SMRU3151
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35694	65.6	-	COFX01	163	4312	4074	3/23/15	3/11/17	Scaffold	SC	SAMEA1015951	GCA_001375935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/935/GCA_001375935.1_6954_1_51	-	0175R
Escherichia coli	562	PRJNA295953	295953	Proteobacteria	Gammaproteobacteria	5.05108	50.4	-	LKDG01	332	5402	4941	11/6/15	2/25/17	Contig	University of Liege	SAMN04100676	GCA_001440735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/735/GCA_001440735.1_ASM144073v1	-	EH1856
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.44678	52.1	-	MXMI01	51	4510	4298	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356968	GCA_002034245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/245/GCA_002034245.1_ASM203424v1	-	BCW_1731
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.87627	32.8	-	LKZR01	114	3068	2835	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893361	GCA_002274475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/475/GCA_002274475.1_UCI26_v1.0	-	ST5:UCI 26
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.65537	32.9	-	LKZY01	242	2963	2562	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893368	GCA_002274525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/525/GCA_002274525.1_UCI33_v1.0	-	ST5:UCI 33
Salmonella enterica subsp. enterica serovar Cerro	340188	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69475	52.3	-	MXMM01	38	4748	4501	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367642	GCA_002034285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/285/GCA_002034285.1_ASM203428v1	-	BCW_1607
Escherichia coli	562	PRJNA295953	295953	Proteobacteria	Gammaproteobacteria	5.03794	50.4	-	LKDI01	328	5401	4929	11/6/15	2/25/17	Contig	University of Liege	SAMN04103095	GCA_001440755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/440/755/GCA_001440755.1_ASM144075v1	-	093A
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36962	65.6	-	COIT01	94	4284	4096	3/23/15	3/11/17	Scaffold	SC	SAMEA1015954	GCA_001375955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/955/GCA_001375955.1_6954_8_57	-	1607Y
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09514	39.7	-	CLUK01	61	2316	2091	3/21/15	3/4/17	Scaffold	SC	SAMEA1025755	GCA_001114485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/485/GCA_001114485.1_6983_2_14	-	SMRU2222
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12504	39.7	-	CMMR01	64	2363	2140	3/22/15	3/4/17	Scaffold	SC	SAMEA1029192	GCA_001114545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/545/GCA_001114545.1_7068_4_19	-	SMRU3139
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36275	65.6	-	COII01	111	4284	4074	3/22/15	3/11/17	Scaffold	SC	SAMEA1015957	GCA_001375975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/975/GCA_001375975.1_6954_7_44	-	0848Y
Escherichia coli VL2732	1173690	PRJNA159237	159237	Proteobacteria	Gammaproteobacteria	4.66403	50.6	-	JTFD01	79	4774	4440	11/9/15	2/25/17	Contig	Kimron Veterinary Institute	SAMN03782458	GCA_001441325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/325/GCA_001441325.1_ASM144132v1	26327312	VL2732
Salmonella enterica subsp. enterica serovar Montevideo	115981	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.74204	52	-	MXMR01	51	4791	4537	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367637	GCA_002034305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/305/GCA_002034305.1_ASM203430v1	-	BCW_1602
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.75813	32.9	-	LKZZ01	224	3031	2614	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893369	GCA_002274535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/535/GCA_002274535.1_UCI34_v1.0	-	ST5:UCI 34
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.86665	32.9	-	LLAA01	111	3051	2821	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893370	GCA_002274545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/545/GCA_002274545.1_UCI35_v1.0	-	ST5:UCI 35
Salmonella enterica subsp. enterica serovar Muenster	82689	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.63397	52.1	-	MXMS01	25	4694	4459	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367636	GCA_002034315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/315/GCA_002034315.1_ASM203431v1	-	BCW_1601
Escherichia coli VL2874	1173689	PRJNA159235	159235	Proteobacteria	Gammaproteobacteria	4.78428	50.5	-	JTFE01	126	4947	4544	11/9/15	2/25/17	Contig	Kimron Veterinary Institute	SAMN03782457	GCA_001441335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/335/GCA_001441335.1_ASM144133v1	26327312	VL2874
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37607	65.6	-	COGB01	100	4303	4108	3/22/15	3/11/17	Scaffold	SC	SAMEA1015958	GCA_001375995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/375/995/GCA_001375995.1_6954_1_52	-	0176S
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.06932	39.7	-	CPOD01	79	2286	2077	3/23/15	3/4/17	Scaffold	SC	SAMEA682597	GCA_001114585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/585/GCA_001114585.1_5381_3_3	-	09B06561
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.09475	39.7	-	CLPS01	59	2326	2093	3/21/15	3/4/17	Scaffold	SC	SAMEA1028905	GCA_001114625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/625/GCA_001114625.1_6949_3_20	-	SMRU2468
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3666	65.6	-	COGJ01	110	4294	4085	3/23/15	3/11/17	Scaffold	SC	SAMEA1015960	GCA_001376015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/015/GCA_001376015.1_6954_1_66	-	0517N
Escherichia coli K71	1176728	PRJNA160251	160251	Proteobacteria	Gammaproteobacteria	5.11507	50.7	-	JTFF01	106	5396	4966	11/9/15	2/25/17	Contig	Kimron Veterinary Institute	SAMN03782459	GCA_001441345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/441/345/GCA_001441345.1_ASM144134v1	26327312	K71
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.6326	52.1	-	MXMU01	24	4680	4457	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367635	GCA_002034335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/335/GCA_002034335.1_ASM203433v1	-	BCW_1599
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.86492	32.8	-	LLAD01	227	3180	2785	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893373	GCA_002274555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/555/GCA_002274555.1_UCI38_v1.0	-	ST5:UCI 38
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.8168	32.9	-	LLAJ01	140	3051	2748	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893379	GCA_002274605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/605/GCA_002274605.1_UCI44_v1.0	-	ST5:UCI 44
Salmonella enterica subsp. enterica serovar Gera	1967599	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.64238	52.3	-	MXMW01	34	4676	4443	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367631	GCA_002034385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/385/GCA_002034385.1_ASM203438v1	-	BCW_1595
Escherichia coli	562	PRJNA294948	294948	Proteobacteria	Gammaproteobacteria	5.50417	50.5	-	LJOJ01	146	5863	5339	11/13/15	2/25/17	Contig	LAU	SAMN04046665	GCA_001443175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/443/175/GCA_001443175.1_ASM144317v1	-	ECGM-IMP53
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36584	65.6	-	COGA01	104	4290	4090	3/22/15	3/11/17	Scaffold	SC	SAMEA1015969	GCA_001376035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/035/GCA_001376035.1_6954_1_53	-	type strain: 0177
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.22649	39.5	-	CPKM01	90	2469	2212	3/23/15	3/4/17	Scaffold	SC	SAMEA1408294	GCA_001114685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/685/GCA_001114685.1_7444_8_8	-	9607+10105
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.12122	39.7	-	CMWP01	117	2253	2055	3/23/15	3/4/17	Scaffold	SC	SAMEA1022939	GCA_001114725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/725/GCA_001114725.1_5919_1_5	-	119
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35036	65.6	-	COKD01	72	4274	4080	3/22/15	3/11/17	Scaffold	SC	SAMEA1015973	GCA_001376055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/055/GCA_001376055.1_6972_6_24	-	0414B
Escherichia coli	562	PRJNA295953	295953	Proteobacteria	Gammaproteobacteria	4.99212	50.5	-	LMZP01	281	5321	4864	11/18/15	2/25/17	Contig	University of Liege	SAMN04251500	GCA_001445675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/675/GCA_001445675.1_ASM144567v1	-	46285
Salmonella enterica subsp. enterica serovar Tornow	1967601	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80452	52.2	-	MXMX01	59	4862	4580	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367630	GCA_002034395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/395/GCA_002034395.1_ASM203439v1	-	BCW_1594
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.88204	32.7	-	LLAG01	175	3075	2750	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893376	GCA_002274615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/615/GCA_002274615.1_UCI41_v1.0	-	ST5:UCI 41
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.80113	32.9	-	LLAF01	171	3009	2700	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893375	GCA_002274625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/625/GCA_002274625.1_UCI40_v1.0	-	ST5:UCI 40
Salmonella enterica subsp. enterica serovar Michigan	940232	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.76665	52.2	-	MXNA01	50	4857	4591	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367628	GCA_002034405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/405/GCA_002034405.1_ASM203440v1	-	BCW_1591
Escherichia coli	562	PRJNA296464	296464	Proteobacteria	Gammaproteobacteria	5.07378	50.7	-	LKJT01	136	5347	4890	11/19/15	2/25/17	Contig	Texas Tech University	SAMN04099654	GCA_001446595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/595/GCA_001446595.1_ASM144659v1	26824353	TTU2014-120BME
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36165	65.6	-	COIP01	103	4268	4086	3/23/15	3/11/17	Scaffold	SC	SAMEA1015975	GCA_001376075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/075/GCA_001376075.1_6954_8_59	-	1613E
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.15845	39.5	-	CPOR01	91	2375	2135	3/23/15	3/10/17	Scaffold	SC	SAMEA1020747	GCA_001115005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/005/GCA_001115005.1_6187_7_8	-	LMG2302
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.13874	39.5	-	CKJX01	41	2361	2122	3/21/15	3/11/17	Scaffold	SC	SAMEA1024024	GCA_001115165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/165/GCA_001115165.1_6631_6_16	-	23F
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39402	65.6	-	COJA01	112	4298	4104	3/23/15	3/11/17	Scaffold	SC	SAMEA1015977	GCA_001376095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/095/GCA_001376095.1_6954_8_68	-	1636E
Escherichia coli	562	PRJNA296464	296464	Proteobacteria	Gammaproteobacteria	5.06353	50.8	-	LKJU01	184	5345	4879	11/19/15	2/25/17	Contig	Texas Tech University	SAMN04099655	GCA_001446615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/615/GCA_001446615.1_ASM144661v1	26824353	TTU2014-121AME
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72487	52.1	-	MXNE01	37	4826	4592	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367624	GCA_002034445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/445/GCA_002034445.1_ASM203444v1	-	BCW_1587
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.70965	32.9	-	LLAM01	191	2946	2597	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893382	GCA_002274635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/635/GCA_002274635.1_UCI47_v1.0	-	ST5:UCI 47
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.6221	32.9	-	LLAP01	174	2774	2463	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893385	GCA_002274685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/685/GCA_002274685.1_UCI50_v1.0	-	ST5:UCI 50
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.6928	52.1	-	MXKR01	36	4804	4555	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356994	GCA_002034455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/455/GCA_002034455.1_ASM203445v1	-	BCW_1986
Escherichia coli str. Deng	1281747	PRJNA186398	186398	Proteobacteria	Gammaproteobacteria	5.17172	50.5	-	AOTC01	319	5702	5117	11/24/15	2/25/17	Contig	The Affiliated Shenzhen Nanshan Hospital of Guangdong Medical College	SAMN04285713	GCA_001447405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/447/405/GCA_001447405.1_ASM144740v1	-	Deng
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36326	65.6	-	COHZ01	103	4284	4071	3/22/15	3/11/17	Scaffold	SC	SAMEA1015978	GCA_001376115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/115/GCA_001376115.1_6954_7_31	-	0833G
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.22628	38.9	-	CKHR01	168	2423	2135	3/21/15	3/11/17	Scaffold	SC	SAMEA1023919	GCA_001115225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/225/GCA_001115225.1_6631_2_5	-	37
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.24397	39.4	-	CLKX01	93	2502	2243	3/21/15	3/11/17	Scaffold	SC	SAMEA1029307	GCA_001115265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/265/GCA_001115265.1_6938_3_36	-	SMRU3161
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36558	65.6	-	COGC01	112	4288	4075	3/23/15	3/11/17	Scaffold	SC	SAMEA1015985	GCA_001376195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/195/GCA_001376195.1_6954_1_54	-	0180X
Escherichia coli	562	PRJNA279964	279964	Proteobacteria	Gammaproteobacteria	5.24107	50.6	-	LASE01	109	5516	5093	11/25/15	2/25/17	Contig	"University of Maryland, School of Medicine"	SAMN03453019	GCA_001448025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/025/GCA_001448025.1_ASM144802v1	26410828	VACI-14
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.9417	52.1	-	MXKK01	48	5101	4784	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357001	GCA_002034465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/465/GCA_002034465.1_ASM203446v1	-	BCW_1993
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.70865	33	-	LLAO01	237	2972	2607	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893384	GCA_002274695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/695/GCA_002274695.1_UCI49_v1.0	-	ST5:UCI 49
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.80005	32.8	-	LLAS01	97	2940	2726	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893388	GCA_002274725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/725/GCA_002274725.1_UCI53_v1.0	-	ST5:UCI 53
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.67537	52.2	-	MXKW01	27	4757	4546	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356989	GCA_002034505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/505/GCA_002034505.1_ASM203450v1	-	BCW_1981
Escherichia coli	562	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.14562	50.6	-	LNGY01	110	5434	5045	12/9/15	2/25/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158281	GCA_001462715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/715/GCA_001462715.1_ASM146271v1	-	K71-77
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35158	65.6	-	COKE01	76	4274	4077	3/23/15	3/11/17	Scaffold	SC	SAMEA1015987	GCA_001376235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/235/GCA_001376235.1_6972_6_26	-	0416D
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	1.97165	39.7	-	CMLE01	43	2155	1956	3/23/15	3/11/17	Scaffold	SC	SAMEA1029250	GCA_001115285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/285/GCA_001115285.1_7054_5_19	-	SMRU3067
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.224	39.5	-	CPKC01	99	2470	2207	3/23/15	3/11/17	Scaffold	SC	SAMEA1408302	GCA_001115325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/325/GCA_001115325.1_7444_8_5	-	9603+12093
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36953	65.6	-	COJS01	80	4273	4099	3/23/15	3/11/17	Scaffold	SC	SAMEA1015988	GCA_001376255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/255/GCA_001376255.1_6972_6_11	-	0547W
Escherichia coli	562	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.4872	50.5	-	LNHL01	252	5835	5363	12/9/15	2/25/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158294	GCA_001462925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/925/GCA_001462925.1_ASM146292v1	-	50579417
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.75437	52.1	-	MXKY01	52	4853	4610	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356987	GCA_002034525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/525/GCA_002034525.1_ASM203452v1	-	BCW_1979
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.84127	32.8	-	LLAX01	112	3006	2770	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893393	GCA_002274765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/765/GCA_002274765.1_UCI58_v1.0	-	ST5:UCI 58
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.71433	32.9	-	LLAZ01	231	2967	2591	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893395	GCA_002274785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/785/GCA_002274785.1_UCI60_v1.0	-	ST5:UCI 60
"Salmonella enterica subsp. VII serovar 1,40:g,z51:--"	41520	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.48811	51.4	-	MXLH01	87	4440	4054	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367807	GCA_002034545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/545/GCA_002034545.1_ASM203454v1	-	2439-64
Escherichia coli	562	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.4325	50.6	-	LNHR01	192	5783	5357	12/9/15	2/25/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158300	GCA_001462975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/462/975/GCA_001462975.1_ASM146297v1	-	50640492
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36415	65.6	-	COIY01	109	4290	4079	3/22/15	3/11/17	Scaffold	SC	SAMEA1015990	GCA_001376295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/295/GCA_001376295.1_6954_8_71	-	0352J
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.07801	39.6	-	CMIH01	42	2279	2050	3/23/15	3/11/17	Scaffold	SC	SAMEA1029403	GCA_001115365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/365/GCA_001115365.1_7038_6_6	-	SMRU2982
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.14801	39.4	-	CKXB01	52	2354	2099	3/21/15	3/11/17	Scaffold	SC	SAMEA1026192	GCA_001115465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/465/GCA_001115465.1_6823_6_17	-	SMRU1985
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35824	65.6	-	COKU01	80	4280	4084	3/22/15	3/11/17	Scaffold	SC	SAMEA1015995	GCA_001376335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/335/GCA_001376335.1_6972_6_47	-	0630L
Escherichia coli	562	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.00669	50.6	-	LNHU01	131	5219	4840	12/9/15	2/25/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158303	GCA_001463115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/115/GCA_001463115.1_ASM146311v1	-	50664179
Salmonella enterica subsp. salamae serovar 58:d:z6	41517	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.88913	51.8	-	MXLI01	62	4918	4621	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367800	GCA_002034565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/565/GCA_002034565.1_ASM203456v1	-	327-85
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.76123	33	-	LLBA01	178	2973	2695	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893396	GCA_002274795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/795/GCA_002274795.1_UCI61_v1.0	-	ST5:UCI 61
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.85373	32.8	-	LLBB01	131	3064	2789	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893397	GCA_002274805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/805/GCA_002274805.1_UCI62_v1.0	-	ST5:UCI 62
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.77531	52	-	MXLK01	86	4769	4461	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356982	GCA_002034595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/595/GCA_002034595.1_ASM203459v1	-	BCW_1908
Escherichia coli	562	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.48354	50.7	-	LNHY01	190	5875	5455	12/9/15	2/25/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158307	GCA_001463195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/195/GCA_001463195.1_ASM146319v1	-	50676002
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3638	65.6	-	COHV01	107	4286	4076	3/23/15	3/11/17	Scaffold	SC	SAMEA1015996	GCA_001376355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/355/GCA_001376355.1_6954_7_26	-	0816N
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.05329	39.5	-	CKRX01	54	2224	2007	3/21/15	3/11/17	Scaffold	SC	SAMEA1023840	GCA_001115525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/525/GCA_001115525.1_6680_8_3	-	SMRU195
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.9892	39.7	-	CKBA01	39	2198	1967	3/21/15	3/11/17	Scaffold	SC	SAMEA974617	GCA_001115565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/565/GCA_001115565.1_6259_7_5	-	32A
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39708	65.6	-	COGV01	116	4310	4110	3/23/15	3/11/17	Scaffold	SC	SAMEA1015997	GCA_001376375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/375/GCA_001376375.1_6954_1_82	-	0314S
Escherichia coli	562	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.34461	50.5	-	LNHQ01	127	5595	5203	12/9/15	2/25/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158299	GCA_001463205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/205/GCA_001463205.1_ASM146320v1	-	50639799
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.6551	52.2	-	MXLO01	56	4717	4480	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356980	GCA_002034615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/615/GCA_002034615.1_ASM203461v1	-	BCW_1872
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.72267	32.8	-	LLBC01	96	2811	2622	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893398	GCA_002274845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/845/GCA_002274845.1_UCI63_v1.0	-	ST5:UCI 63
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.83652	32.9	-	LLBG01	171	3040	2774	8/28/17	9/18/17	Scaffold	USDA-ARS	SAMN03893328	GCA_002274855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/855/GCA_002274855.1_UCSF13502_v1.0	-	BD13502
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.31803	52	-	MXLQ01	132	5515	5250	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356979	GCA_002034625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/625/GCA_002034625.1_ASM203462v1	-	BCW_1864
Escherichia coli	562	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.08283	50.7	-	LNIE01	244	5363	4927	12/9/15	2/25/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158313	GCA_001463325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/325/GCA_001463325.1_ASM146332v1	-	50739822
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35118	65.6	-	COKA01	79	4261	4065	3/22/15	3/11/17	Scaffold	SC	SAMEA1015998	GCA_001376395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/395/GCA_001376395.1_6972_6_25	-	0415C
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.13431	39.4	-	CKWQ01	39	2376	2130	3/21/15	3/11/17	Scaffold	SC	SAMEA1025945	GCA_001115645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/645/GCA_001115645.1_6823_5_5	-	SMRU1949
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11748	39.5	-	CKWU01	75	2308	2084	3/21/15	3/11/17	Scaffold	SC	SAMEA1026097	GCA_001115665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/665/GCA_001115665.1_6823_5_8	-	SMRU1952
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34982	65.6	-	COKZ01	50	4245	4078	3/23/15	3/11/17	Scaffold	SC	SAMEA1016000	GCA_001376415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/415/GCA_001376415.1_6972_6_7	-	type strain: 0430
Escherichia coli	562	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.37872	50.5	-	LNIH01	284	5727	5289	12/9/15	2/25/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158316	GCA_001463345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/345/GCA_001463345.1_ASM146334v1	-	50760471
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.49559	51.7	-	MXMJ01	96	4493	4122	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356967	GCA_002034665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/665/GCA_002034665.1_ASM203466v1	-	BCW_1640
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.85069	32.8	-	LLBK01	153	3082	2782	8/28/17	9/18/17	Scaffold	USDA-ARS	SAMN03893332	GCA_002274875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/875/GCA_002274875.1_UCSF14262_v1.0	-	BD14262
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.67043	32.9	-	LLBJ01	139	2841	2569	8/28/17	9/18/17	Scaffold	USDA-ARS	SAMN03893331	GCA_002274895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/895/GCA_002274895.1_UCSF14054_v1.0	-	BD14054
Salmonella enterica subsp. enterica serovar Alachua	913240	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.75739	52.2	-	MXML01	44	4859	4609	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367643	GCA_002034675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/675/GCA_002034675.1_ASM203467v1	-	BCW_1608
Escherichia coli	562	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	4.85446	50.5	-	LNIJ01	271	5034	4720	12/9/15	2/25/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158318	GCA_001463385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/385/GCA_001463385.1_ASM146338v1	-	50816743
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36514	65.6	-	COIH01	111	4283	4081	3/23/15	3/11/17	Scaffold	SC	SAMEA1016002	GCA_001376435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/435/GCA_001376435.1_6954_7_42	-	0846W
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.13345	39.7	-	CMUA01	62	2283	1986	3/23/15	3/10/17	Scaffold	SC	SAMEA1022793	GCA_001115705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/705/GCA_001115705.1_5737_5_2	-	208_15
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.13427	39.8	-	CMWR01	136	2266	2017	3/23/15	3/11/17	Scaffold	SC	SAMEA1022929	GCA_001115725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/725/GCA_001115725.1_5919_1_7	-	122
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36394	65.6	-	COGQ01	111	4288	4083	3/23/15	3/11/17	Scaffold	SC	SAMEA1016004	GCA_001376455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/455/GCA_001376455.1_6954_1_73	-	0032L
Escherichia coli	562	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.28487	50.7	-	LNIN01	198	5646	5273	12/9/15	2/25/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158322	GCA_001463405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/405/GCA_001463405.1_ASM146340v1	-	50857972
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.60329	51.3	-	MXMK01	54	4700	4216	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356966	GCA_002034695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/695/GCA_002034695.1_ASM203469v1	-	BCW_1629
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.84515	32.8	-	LLBM01	103	3014	2777	8/28/17	9/18/17	Scaffold	USDA-ARS	SAMN03893334	GCA_002274915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/915/GCA_002274915.1_UCSF14655_v1.0	-	BD14655
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.69138	32.9	-	LLBQ01	156	2815	2588	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893319	GCA_002274945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/945/GCA_002274945.1_UMN-3_v1.0	-	ST5:MN 3
Salmonella enterica subsp. enterica serovar Cubana	189201	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.94639	52.2	-	MXMN01	73	5037	4790	3/17/17	4/10/17	Contig	University of California at Davis	SAMN02367641	GCA_002034725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/725/GCA_002034725.1_ASM203472v1	-	BCW_1606
Escherichia coli	562	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.22143	50.8	-	LNIP01	68	5462	5119	12/9/15	2/25/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158324	GCA_001463455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/455/GCA_001463455.1_ASM146345v1	-	50870281
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36661	65.6	-	COGL01	111	4294	4075	3/23/15	3/11/17	Scaffold	SC	SAMEA1016007	GCA_001376475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/475/GCA_001376475.1_6954_1_71	-	type strain: 0637
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05328	39.7	-	CLOE01	68	2246	2013	3/21/15	3/11/17	Scaffold	SC	SAMEA1029014	GCA_001115745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/745/GCA_001115745.1_6949_1_23	-	SMRU2423
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.17162	39.5	-	CLVD01	68	2418	2170	3/21/15	3/11/17	Scaffold	SC	SAMEA1026021	GCA_001115765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/765/GCA_001115765.1_6983_3_51	-	SMRU2259
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35342	65.6	-	COHT01	99	4280	4077	3/22/15	3/11/17	Scaffold	SC	SAMEA1016008	GCA_001376495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/495/GCA_001376495.1_6954_7_24	-	0812J
Escherichia coli	562	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.01316	50.6	-	LNHW01	156	5317	4931	12/9/15	2/25/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158305	GCA_001463535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/535/GCA_001463535.1_ASM146353v1	-	50673720
Salmonella enterica subsp. enterica serovar Inverness	913074	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.88714	52.1	-	MXMO01	31	5032	4739	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367640	GCA_002034735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/735/GCA_002034735.1_ASM203473v1	-	BCW_1605
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.91711	32.8	-	LLBR01	160	3111	2817	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893324	GCA_002274955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/955/GCA_002274955.1_UMN38_v1.0	-	ST5:MN 38
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.8616	32.8	-	LLBS01	134	3006	2768	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893320	GCA_002274975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/975/GCA_002274975.1_UMN4_v1.0	-	ST5:MN 4
Salmonella enterica subsp. enterica serovar Javiana	363569	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.51415	52.2	-	MXMP01	60	4581	4336	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367639	GCA_002034745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/745/GCA_002034745.1_ASM203474v1	-	BCW_1604
Escherichia coli	562	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.29892	50.5	-	LNID01	196	5557	5144	12/9/15	2/25/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158312	GCA_001463585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/585/GCA_001463585.1_ASM146358v1	-	50739467
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36578	65.6	-	COJM01	109	4301	4086	3/22/15	3/11/17	Scaffold	SC	SAMEA1016013	GCA_001376535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/535/GCA_001376535.1_6954_8_92	-	1559W
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11749	39.5	-	CMQR01	74	2336	2100	3/23/15	3/4/17	Scaffold	SC	SAMEA2061739	GCA_001115845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/845/GCA_001115845.1_9803_8_19	-	23F
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15867	39.6	-	CKIZ01	81	2403	2146	3/21/15	3/4/17	Scaffold	SC	SAMEA1023864	GCA_001115865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/865/GCA_001115865.1_6631_4_3	-	14
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35504	65.6	-	COKF01	83	4253	4059	3/22/15	3/11/17	Scaffold	SC	SAMEA1016014	GCA_001376555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/555/GCA_001376555.1_6972_6_27	-	0417E
Escherichia coli	562	PRJNA295003	295003	Proteobacteria	Gammaproteobacteria	5.10447	50.6	-	LNIK01	140	5385	5048	12/9/15	2/25/17	Contig	Norwegian National Advisory Unit on Detection of Antimicrobial Resistance	SAMN04158319	GCA_001463645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/463/645/GCA_001463645.1_ASM146364v1	-	50822286
Salmonella enterica subsp. enterica serovar Johannesburg	913076	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70155	52.3	-	MXMQ01	34	4806	4552	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367638	GCA_002034785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/785/GCA_002034785.1_ASM203478v1	-	BCW_1603
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.84622	32.8	-	LLBT01	117	2997	2774	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893321	GCA_002274995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/995/GCA_002274995.1_UMN5_v1.0	-	ST5:MN 5
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.82975	32.8	-	LLBU01	159	3039	2737	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893325	GCA_002275025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/025/GCA_002275025.1_UMN50_v1.0	-	ST5:MN 50
Salmonella enterica subsp. enterica serovar Brisbane	1967596	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.82181	52.2	-	MXMV01	41	4937	4677	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367633	GCA_002034805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/805/GCA_002034805.1_ASM203480v1	-	BCW_1597
Escherichia coli NCCP 15653	1330530	PRJNA201389	201389	Proteobacteria	Gammaproteobacteria	5.36187	50.6	-	ATLY01	43	5585	5175	12/15/15	2/25/17	Contig	Yonsei University	SAMN02729951	GCA_001466755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/755/GCA_001466755.1_ASM146675v1	26913081	NCCP 15653
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36048	65.6	-	COGX01	109	4272	4073	3/23/15	3/11/17	Scaffold	SC	SAMEA1016018	GCA_001376575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/575/GCA_001376575.1_6954_1_81	-	0096F
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.14656	39.5	-	CMET01	120	2385	2138	3/21/15	3/4/17	Scaffold	SC	SAMEA1028805	GCA_001115885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/885/GCA_001115885.1_7011_5_20	-	SMRU2804
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09627	39.6	-	CKNQ01	61	2345	2101	3/21/15	3/4/17	Scaffold	SC	SAMEA1023812	GCA_001115945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/945/GCA_001115945.1_6664_1_22	-	9V
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3799	65.6	-	COJT01	90	4284	4081	3/23/15	3/11/17	Scaffold	SC	SAMEA1016019	GCA_001376595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/595/GCA_001376595.1_6972_6_12	-	0548X
Escherichia coli NCCP 15656	1330528	PRJNA201387	201387	Proteobacteria	Gammaproteobacteria	4.92531	50.9	-	ATLX01	15	5147	4826	12/15/15	2/25/17	Contig	Yonsei University	SAMN02729949	GCA_001466815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/466/815/GCA_001466815.1_ASM146681v1	-	NCCP 15656
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89965	52.2	-	MXMY01	95	5069	4828	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356963	GCA_002034815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/815/GCA_002034815.1_ASM203481v1	-	BCW_1593
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.9133	32.7	-	LKVU01	107	3053	2838	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893234	GCA_002275035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/035/GCA_002275035.1_ISU-872_v1.0	-	ST5:ISU 872
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.86899	32.8	-	LKVT01	137	3017	2782	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893233	GCA_002275045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/045/GCA_002275045.1_ISU-871_v1.0	-	ST5:ISU 871
Salmonella enterica subsp. enterica serovar Rubislaw	598	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.53667	52.2	-	MXNB01	38	4576	4333	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367627	GCA_002034845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/845/GCA_002034845.1_ASM203484v1	-	BCW_1590
Escherichia coli NCCP 15655	1330529	PRJNA201388	201388	Proteobacteria	Gammaproteobacteria	4.96571	50.9	-	ATLW01	5	5188	4871	12/15/15	2/25/17	Contig	Yonsei University	SAMN02729950	GCA_001467005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/467/005/GCA_001467005.1_ASM146700v1	-	NCCP 15655
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35669	65.6	-	COGO01	86	4260	4085	3/23/15	3/11/17	Scaffold	SC	SAMEA1016021	GCA_001376615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/615/GCA_001376615.1_6954_1_72	-	0640X
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.1895	39.5	-	CMHF01	105	2395	2159	3/22/15	3/4/17	Scaffold	SC	SAMEA1029322	GCA_001116085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/085/GCA_001116085.1_7038_5_15	-	SMRU2967
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12306	39.6	-	CLOP01	72	2310	2077	3/21/15	3/4/17	Scaffold	SC	SAMEA1028668	GCA_001116165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/165/GCA_001116165.1_6949_2_20	-	SMRU2444
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36263	65.6	-	COHR01	102	4285	4068	3/23/15	3/11/17	Scaffold	SC	SAMEA1016023	GCA_001376635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/635/GCA_001376635.1_6954_7_25	-	0813K
Escherichia coli	562	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.68287	50.8	-	LORP01	13	6093	5418	12/21/15	8/11/17	Contig	US Food and Drug Administration 	SAMN03996286	GCA_001471815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/815/GCA_001471815.1_ASM147181v1	-	FDAARGOS_142
Salmonella enterica subsp. enterica serovar Saphra	1967600	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.61839	52.2	-	MXNC01	56	4705	4438	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367626	GCA_002034855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/855/GCA_002034855.1_ASM203485v1	-	BCW_1589
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.41624	32.8	-	LKVW01	175	2523	2333	8/28/17	8/28/17	Scaffold	USDA-ARS	SAMN03893236	GCA_002275055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/055/GCA_002275055.1_ISU-874_v1.0	-	ST5:ISU 874
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.86288	32.8	-	LKVY01	198	3074	2724	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893238	GCA_002275105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/105/GCA_002275105.1_ISU-876_v1.0	-	ST5:ISU 876
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7326	52.1	-	MXND01	33	4836	4587	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367625	GCA_002034885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/885/GCA_002034885.1_ASM203488v1	-	BCW_1588
Escherichia coli	562	PRJNA298378	298378	Proteobacteria	Gammaproteobacteria	4.51299	50.8	-	LLYC01	135	4627	4353	1/4/16	2/25/17	Contig	Harbin Medical University	SAMN04158709	GCA_001484085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/085/GCA_001484085.1_ASM148408v1	-	AN61
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38813	65.6	-	COKX01	76	4295	4105	3/23/15	3/11/17	Scaffold	SC	SAMEA1016024	GCA_001376655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/655/GCA_001376655.1_6972_6_6	-	0429S
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.19169	39.6	-	CKUY01	70	2438	2178	3/21/15	3/4/17	Scaffold	SC	SAMEA1026108	GCA_001116185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/185/GCA_001116185.1_6823_3_19	-	SMRU1915
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.01871	39.6	-	CMLF01	46	2196	1965	3/22/15	3/4/17	Scaffold	SC	SAMEA1029196	GCA_001116205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/205/GCA_001116205.1_7054_5_8	-	SMRU3056
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36496	65.6	-	COIQ01	85	4266	4087	3/23/15	3/11/17	Scaffold	SC	SAMEA1016025	GCA_001376675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/675/GCA_001376675.1_6954_8_52	-	0953M
Escherichia coli	562	PRJNA298378	298378	Proteobacteria	Gammaproteobacteria	4.46958	50.8	-	LLYD01	135	4565	4282	1/4/16	2/25/17	Contig	Harbin Medical University	SAMN04196998	GCA_001484235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/235/GCA_001484235.1_ASM148423v1	-	AN62
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89298	52.2	-	MXNF01	78	5030	4769	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356962	GCA_002034895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/895/GCA_002034895.1_ASM203489v1	-	BCW_1585
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.84943	32.8	-	LKWD01	141	2962	2751	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893243	GCA_002275115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/115/GCA_002275115.1_ISU-881_v1.0	-	ST5:ISU 881
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.924	32.8	-	LKWA01	142	3090	2814	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893240	GCA_002275125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/125/GCA_002275125.1_ISU-878_v1.0	-	ST5:ISU 878
"Salmonella enterica subsp. enterica serovar 4,[5],12:i:-"	440524	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89051	52.2	-	MXNH01	85	5053	4811	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367622	GCA_002034905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/905/GCA_002034905.1_ASM203490v1	-	BCW_1583
Escherichia coli	562	PRJNA298378	298378	Proteobacteria	Gammaproteobacteria	4.73779	50.7	-	LLYE01	128	4912	4645	1/4/16	2/25/17	Contig	Harbin Medical University	SAMN04197002	GCA_001484255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/255/GCA_001484255.1_ASM148425v1	-	AY62
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38768	65.6	-	COKY01	81	4283	4094	3/23/15	3/11/17	Scaffold	SC	SAMEA1016026	GCA_001376695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/695/GCA_001376695.1_6972_6_9	-	0507C
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.06297	39.7	-	CPOB01	82	2254	2063	3/22/15	3/4/17	Scaffold	SC	SAMEA682425	GCA_001116245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/245/GCA_001116245.1_5366_3_4	-	08B03195
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.2508	39.5	-	CMOX01	77	2496	2219	3/22/15	3/11/17	Scaffold	SC	SAMEA2061711	GCA_001116365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/365/GCA_001116365.1_9803_7_40	-	6B
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36308	65.6	-	COIF01	104	4290	4076	3/23/15	3/11/17	Scaffold	SC	SAMEA1016037	GCA_001376775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/775/GCA_001376775.1_6954_7_40	-	type strain: 0844
Escherichia coli	562	PRJNA298378	298378	Proteobacteria	Gammaproteobacteria	4.62226	50.8	-	LLYG01	127	4747	4513	1/4/16	2/25/17	Contig	Harbin Medical University	SAMN04198213	GCA_001484265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/265/GCA_001484265.1_ASM148426v1	-	AY64
"Salmonella enterica subsp. enterica serovar 4,[5],12:i:-"	440524	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89217	52.2	-	MXNI01	69	5060	4816	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367621	GCA_002034915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/915/GCA_002034915.1_ASM203491v1	-	BCW_1582
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.8655	32.8	-	LKWH01	78	2996	2789	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893247	GCA_002275135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/135/GCA_002275135.1_ISU-887_v1.0	-	ST5:ISU 887
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.80777	32.9	-	LKWN01	91	2961	2700	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893253	GCA_002275185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/185/GCA_002275185.1_ISU-914_v1.0	-	ST398:ISU 914
"Salmonella enterica subsp. enterica serovar 4,[5],12:i:-"	440524	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.07192	52.2	-	MXNJ01	90	5293	5040	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367620	GCA_002034965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/965/GCA_002034965.1_ASM203496v1	-	BCW_1581
Escherichia coli	562	PRJNA298378	298378	Proteobacteria	Gammaproteobacteria	5.01399	50.6	-	LLYI01	138	5142	4880	1/4/16	2/25/17	Contig	Harbin Medical University	SAMN04198215	GCA_001484295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/295/GCA_001484295.1_ASM148429v1	-	AY69
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38545	65.6	-	COHL01	106	4290	4095	3/23/15	3/11/17	Scaffold	SC	SAMEA1016038	GCA_001376795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/795/GCA_001376795.1_6954_7_13	-	0851B
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09569	39.6	-	CKDJ01	56	2285	2036	3/21/15	3/11/17	Scaffold	SC	SAMEA1023849	GCA_001116385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/385/GCA_001116385.1_6593_5_6	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09103	39.7	-	CLGI01	57	2306	2090	3/21/15	3/11/17	Scaffold	SC	SAMEA1025893	GCA_001116485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/485/GCA_001116485.1_6925_3_9	-	SMRU2121
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37121	65.6	-	COIR01	96	4283	4090	3/22/15	3/11/17	Scaffold	SC	SAMEA1016043	GCA_001376815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/815/GCA_001376815.1_6954_8_53	-	1187R
Escherichia coli	562	PRJNA298378	298378	Proteobacteria	Gammaproteobacteria	4.64666	50.6	-	LLYF01	140	4761	4474	1/4/16	2/25/17	Contig	Harbin Medical University	SAMN04197431	GCA_001484305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/305/GCA_001484305.1_ASM148430v1	-	AY63
"Salmonella enterica subsp. enterica serovar 4,[5],12:i:-"	440524	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.0022	52.1	-	MXNK01	75	5208	4950	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367619	GCA_002034975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/975/GCA_002034975.1_ASM203497v1	-	BCW_1580
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.93411	32.8	-	LKWJ01	220	3187	2782	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893249	GCA_002275195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/195/GCA_002275195.1_ISU-889_v1.0	-	ST5:ISU 889
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.81387	32.9	-	LKWU01	105	2962	2719	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893260	GCA_002275205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/205/GCA_002275205.1_ISU-922_v1.0	-	ST398:ISU 922
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.95958	52.1	-	MXNL01	122	5134	4854	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367617	GCA_002034985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/985/GCA_002034985.1_ASM203498v1	-	DT104
Escherichia coli	562	PRJNA298378	298378	Proteobacteria	Gammaproteobacteria	4.58866	50.8	-	LLYH01	180	4797	4494	1/4/16	2/25/17	Contig	Harbin Medical University	SAMN04198214	GCA_001484335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/335/GCA_001484335.1_ASM148433v1	-	AY65
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35727	65.6	-	COLA01	77	4252	4079	3/22/15	3/11/17	Scaffold	SC	SAMEA1016045	GCA_001376855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/855/GCA_001376855.1_6972_6_8	-	0437B
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21384	39.6	-	CPRW01	95	2450	2204	3/23/15	3/11/17	Scaffold	SC	SAMEA1408211	GCA_001116505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/505/GCA_001116505.1_7444_8_83	-	0501+31089
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.07814	39.6	-	CMUO01	192	2281	2022	3/23/15	3/10/17	Scaffold	SC	SAMEA1022909	GCA_001116625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/625/GCA_001116625.1_5737_7_2	-	158
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36287	65.6	-	COHA01	119	4290	4073	3/23/15	3/11/17	Scaffold	SC	SAMEA1016052	GCA_001376895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/895/GCA_001376895.1_6954_1_84	-	0341X
Escherichia coli	562	PRJNA298378	298378	Proteobacteria	Gammaproteobacteria	4.64463	50.6	-	LLYJ01	117	4735	4472	1/4/16	2/25/17	Contig	Harbin Medical University	SAMN04202569	GCA_001484355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/355/GCA_001484355.1_ASM148435v1	-	AY71
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.96325	52.1	-	MXNN01	80	5112	4869	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367613	GCA_002035025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/025/GCA_002035025.1_ASM203502v1	-	BCW_1574
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.72865	33	-	LKWW01	116	2876	2629	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893262	GCA_002275225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/225/GCA_002275225.1_ISU-925_v1.0	-	ST398:ISU 925
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.73294	32.9	-	LKWX01	109	2830	2609	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893263	GCA_002275265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/265/GCA_002275265.1_ISU-927_v1.0	-	ST398:ISU 927
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.0183	52	-	MXNP01	238	5172	4906	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367611	GCA_002035035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/035/GCA_002035035.1_ASM203503v1	-	BCW_1572
Escherichia coli	562	PRJNA298378	298378	Proteobacteria	Gammaproteobacteria	4.77126	50.7	-	LLYK01	186	4935	4625	1/4/16	2/25/17	Contig	Harbin Medical University	SAMN04202570	GCA_001484375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/375/GCA_001484375.1_ASM148437v1	-	AZ71
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3624	65.6	-	COHJ01	110	4287	4081	3/22/15	3/11/17	Scaffold	SC	SAMEA1016054	GCA_001376915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/915/GCA_001376915.1_6954_7_12	-	0960V
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.08565	39.8	-	CPMB01	110	2248	1996	3/23/15	3/11/17	Scaffold	SC	SAMEA1020333	GCA_001116705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/705/GCA_001116705.1_6237_8_17	-	S-158
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1206	39.4	-	CLFD01	63	2318	2083	3/21/15	3/11/17	Scaffold	SC	SAMEA1026178	GCA_001116845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/845/GCA_001116845.1_6899_7_14	-	SMRU2102
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36371	65.6	-	COIZ01	106	4286	4076	3/22/15	3/11/17	Scaffold	SC	SAMEA1016055	GCA_001376935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/935/GCA_001376935.1_6954_8_72	-	0367A
Escherichia coli	562	PRJNA298378	298378	Proteobacteria	Gammaproteobacteria	4.55322	51	-	LLYO01	154	4649	4424	1/4/16	2/25/17	Contig	Harbin Medical University	SAMN04202581	GCA_001484395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/395/GCA_001484395.1_ASM148439v1	-	AZ76
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.90629	52.2	-	MXNM01	88	5046	4799	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367614	GCA_002035045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/045/GCA_002035045.1_ASM203504v1	-	BCW_1575
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.58135	32.9	-	LKXA01	196	2754	2476	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893266	GCA_002275275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/275/GCA_002275275.1_ISU-931_v1.0	-	ST5:ISU 931
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.73085	32.9	-	LKXB01	163	2873	2635	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893267	GCA_002275285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/285/GCA_002275285.1_ISU-933_v1.0	-	ST5:ISU 933
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.97071	52.1	-	MXNQ01	109	5142	4889	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367610	GCA_002035055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/055/GCA_002035055.1_ASM203505v1	-	BCW_1571
Escherichia coli	562	PRJNA298378	298378	Proteobacteria	Gammaproteobacteria	4.48269	50.8	-	LLYN01	91	4561	4302	1/4/16	2/25/17	Contig	Harbin Medical University	SAMN04202573	GCA_001484405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/405/GCA_001484405.1_ASM148440v1	-	AZ75
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35528	65.6	-	COKT01	77	4272	4076	3/23/15	3/11/17	Scaffold	SC	SAMEA1016060	GCA_001376975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/975/GCA_001376975.1_6972_6_46	-	0571X
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.18947	39.7	-	CPKN01	117	2381	2172	3/23/15	3/11/17	Scaffold	SC	SAMEA1020671	GCA_001117045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/045/GCA_001117045.1_5901_7_9	-	29_PMEN2
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	1.99329	39.8	-	CQZN01	43	2193	1955	3/22/15	3/11/17	Scaffold	SC	SAMEA1024704	GCA_001117065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/065/GCA_001117065.1_6730_5_2	-	SMRU650
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39551	65.6	-	COIS01	96	4298	4112	3/23/15	3/11/17	Scaffold	SC	SAMEA1016061	GCA_001376995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/995/GCA_001376995.1_6954_8_54	-	1190V
Escherichia coli	562	PRJNA298378	298378	Proteobacteria	Gammaproteobacteria	4.75369	50.9	-	LLYP01	188	4900	4611	1/4/16	2/25/17	Contig	Harbin Medical University	SAMN04202582	GCA_001484415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/415/GCA_001484415.1_ASM148441v1	-	AZ77
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.91194	52.2	-	MXNR01	140	5041	4801	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367609	GCA_002035105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/105/GCA_002035105.1_ASM203510v1	-	BCW_1570
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.79432	32.8	-	LKXE01	105	2897	2700	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893270	GCA_002275295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/295/GCA_002275295.1_ISU-936_v1.0	-	ST5:ISU 936
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.73339	32.9	-	LKXM01	172	2859	2617	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893278	GCA_002275345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/345/GCA_002275345.1_ISU-948_v1.0	-	ST5:ISU 948
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.93498	52	-	MXNS01	1384	5592	4622	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367608	GCA_002035115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/115/GCA_002035115.1_ASM203511v1	-	BCW_1569
Escherichia coli	562	PRJNA298378	298378	Proteobacteria	Gammaproteobacteria	4.71879	50.8	-	LLYQ01	208	4848	4584	1/4/16	2/25/17	Contig	Harbin Medical University	SAMN04202583	GCA_001484455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/455/GCA_001484455.1_ASM148445v1	-	AZ79
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38904	65.6	-	COIU01	102	4286	4087	3/22/15	3/11/17	Scaffold	SC	SAMEA1016062	GCA_001377015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/015/GCA_001377015.1_6954_8_61	-	1616H
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.06305	39.7	-	CPLV01	83	2259	2078	3/23/15	3/11/17	Scaffold	SC	SAMEA682529	GCA_001117085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/085/GCA_001117085.1_5366_5_12	-	08B07108
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.06137	39.5	-	CMPZ01	57	2286	2011	3/23/15	3/11/17	Scaffold	SC	SAMEA2061938	GCA_001117105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/105/GCA_001117105.1_9803_7_74	-	37
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35447	65.6	-	COHI01	79	4268	4083	3/23/15	3/11/17	Scaffold	SC	SAMEA1016063	GCA_001377035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/035/GCA_001377035.1_6954_7_1	-	0398J
Escherichia coli	562	PRJNA298378	298378	Proteobacteria	Gammaproteobacteria	4.55758	50.6	-	LLYL01	131	4655	4387	1/4/16	2/25/17	Contig	Harbin Medical University	SAMN04202571	GCA_001484475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/475/GCA_001484475.1_ASM148447v1	-	AZ72
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.99975	52.1	-	MXNU01	203	5236	4922	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356960	GCA_002035125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/125/GCA_002035125.1_ASM203512v1	-	BCW_1566
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.75663	32.8	-	LKXV01	122	2877	2655	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893287	GCA_002275355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/355/GCA_002275355.1_ISU-962_v1.0	-	ST5:ISU 962
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.78188	32.9	-	LKXS01	198	2968	2660	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893284	GCA_002275365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/365/GCA_002275365.1_ISU-956_v1.0	-	ST5:ISU 956
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.99242	52.1	-	MXNT01	70	5166	4912	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367606	GCA_002035135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/135/GCA_002035135.1_ASM203513v1	-	BCW_1567
Escherichia coli	562	PRJNA298378	298378	Proteobacteria	Gammaproteobacteria	4.86733	50.9	-	LLYM01	179	5013	4732	1/4/16	2/25/17	Contig	Harbin Medical University	SAMN04202572	GCA_001484485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/484/485/GCA_001484485.1_ASM148448v1	-	AZ74
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38689	65.6	-	COKH01	79	4281	4090	3/23/15	3/11/17	Scaffold	SC	SAMEA1016067	GCA_001377055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/055/GCA_001377055.1_6972_6_29	-	0448N
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.19772	39.6	-	CPRH01	117	2391	2184	3/22/15	3/11/17	Scaffold	SC	SAMEA1408230	GCA_001117185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/185/GCA_001117185.1_7444_8_62	-	0207+15090
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07707	39.5	-	CKOQ01	27	2260	2011	3/21/15	3/11/17	Scaffold	SC	SAMEA1024833	GCA_001117265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/265/GCA_001117265.1_6680_4_18	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.355	65.6	-	COJR01	77	4285	4075	3/23/15	3/11/17	Scaffold	SC	SAMEA1016071	GCA_001377075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/075/GCA_001377075.1_6972_6_1	-	0187E
Escherichia coli	562	PRJEB9469	306445	Proteobacteria	Gammaproteobacteria	5.28241	50.6	-	CVTE01	110	5618	5268	12/15/15	2/25/17	Contig	INSTITUT PASTEUR	SAMEA3444556	GCA_001499595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/499/595/GCA_001499595.1_AL505-MS	-	AL505
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.64433	51.7	-	MXNY01	43	4609	4302	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356957	GCA_002035185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/185/GCA_002035185.1_ASM203518v1	-	BCW_1561
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.75423	32.9	-	LKXO01	131	2879	2678	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893280	GCA_002275385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/385/GCA_002275385.1_ISU-951_v1.0	-	ST5:ISU 951
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.66657	32.9	-	LKXY01	155	2778	2523	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893290	GCA_002275425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/425/GCA_002275425.1_ISU-968_v1.0	-	ST5:ISU 968
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.00092	52.1	-	MXNV01	102	5194	4919	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356959	GCA_002035205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/205/GCA_002035205.1_ASM203520v1	-	BCW_1565
Escherichia coli	562	PRJNA237953	237953	Proteobacteria	Gammaproteobacteria	5.52064	50.5	-	JHTM01	289	6082	5561	8/11/15	2/25/17	Contig	"University of Maryland, School of Medicine"	SAMN02640758	GCA_001506145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/506/145/GCA_001506145.1_703450	-	703450
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34931	65.6	-	COJW01	69	4244	4067	3/23/15	3/11/17	Scaffold	SC	SAMEA1016072	GCA_001377095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/095/GCA_001377095.1_6972_6_16	-	0377L
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.16478	39.5	-	CIMN01	168	2399	2153	3/21/15	3/4/17	Scaffold	SC	SAMEA1023931	GCA_001117445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/445/GCA_001117445.1_6714_8_14	-	SMRU566
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08622	39.7	-	CKPV01	56	2296	2095	3/21/15	3/4/17	Scaffold	SC	SAMEA1024629	GCA_001117565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/565/GCA_001117565.1_6680_5_24	-	SMRU936
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3635	65.6	-	COGU01	102	4286	4077	3/22/15	3/11/17	Scaffold	SC	SAMEA1016073	GCA_001377115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/115/GCA_001377115.1_6954_1_78	-	0224V
Escherichia coli O157:H7	83334	PRJNA294158	294158	Proteobacteria	Gammaproteobacteria	5.75908	50.5	-	LPWC02	9	6234	5610	1/15/16	2/25/17	Contig	USDA/ARS/Eastern Regional Research Center	SAMN04347375	GCA_001516935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/516/935/GCA_001516935.2_ASM151693v2	-	EDL 932
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72153	51.7	-	MXNX01	110	4776	4434	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356958	GCA_002035215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/215/GCA_002035215.1_ASM203521v1	-	BCW_1562
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.79299	32.8	-	LKYA01	91	2909	2702	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893292	GCA_002275435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/435/GCA_002275435.1_ISU-970_v1.0	-	ST5:ISU 970
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.67381	32.9	-	LKYH01	126	2791	2579	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893299	GCA_002275455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/455/GCA_002275455.1_ISU-980_v1.0	-	ST5:ISU 980
"Salmonella enterica subsp. indica serovar 11:b:1,7"	1160774	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.58387	51.8	-	MXOA01	80	4548	4254	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367603	GCA_002035225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/225/GCA_002035225.1_ASM203522v1	-	BCW_1559
Escherichia coli	562	PRJEB11796	309011	Proteobacteria	Gammaproteobacteria	5.23503	50.7	-	FBVS01	154	5511	5165	1/17/16	2/25/17	Contig	CHU BICHAT	SAMEA3720091	GCA_001517685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/517/685/GCA_001517685.1_NG-7574_Bell_ERRESI	-	-
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35576	65.6	-	COKG01	64	4256	4079	3/22/15	3/11/17	Scaffold	SC	SAMEA1016077	GCA_001377135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/135/GCA_001377135.1_6972_6_28	-	0418F
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.15574	39.6	-	CMHS01	61	2390	2159	3/23/15	3/4/17	Scaffold	SC	SAMEA1029190	GCA_001117605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/605/GCA_001117605.1_7038_6_11	-	SMRU2987
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.24198	39.4	-	CMMK01	91	2475	2235	3/23/15	3/4/17	Scaffold	SC	SAMEA1029280	GCA_001117645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/645/GCA_001117645.1_7068_4_11	-	SMRU3131
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36434	65.6	-	COGF01	108	4296	4087	3/23/15	3/11/17	Scaffold	SC	SAMEA1016078	GCA_001377155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/155/GCA_001377155.1_6954_1_61	-	0402N
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.07666	50.5	-	LQZV01	269	5445	4894	1/19/16	2/25/17	Contig	JCVI	SAMN04388537	GCA_001518355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/355/GCA_001518355.1_ASM151835v1	-	GN02748
"Salmonella enterica subsp. houtenae serovar 16:z4,z32:-"	1307497	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.6225	51.6	-	MXOM01	65	4622	4264	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367596	GCA_002035325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/325/GCA_002035325.1_ASM203532v1	-	BCW_1546
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.65505	33	-	LKYD01	200	2764	2547	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893295	GCA_002275465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/465/GCA_002275465.1_ISU-973_v1.0	-	ST5:ISU 973
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.43279	32.9	-	LKYV01	137	2563	2379	8/28/17	8/28/17	Scaffold	USDA-ARS	SAMN03893339	GCA_002275505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/505/GCA_002275505.1_UCI04_v1.0	-	ST5:UCI 4
"Salmonella enterica subsp. houtenae serovar 45:g,z51:-"	1967611	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.62726	51.7	-	MXON01	68	4633	4285	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367595	GCA_002035365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/365/GCA_002035365.1_ASM203536v1	-	BCW_1545
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.22645	50.7	-	LQZU01	317	5581	5073	1/19/16	2/25/17	Contig	JCVI	SAMN04388536	GCA_001518365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/365/GCA_001518365.1_ASM151836v1	-	GN02740
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36101	65.6	-	COGS01	102	4274	4081	3/22/15	3/11/17	Scaffold	SC	SAMEA1016080	GCA_001377175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/175/GCA_001377175.1_6954_1_76	-	0309M
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.00074	39.7	-	CLOK01	56	2197	1951	3/21/15	3/6/17	Scaffold	SC	SAMEA1029102	GCA_001117825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/825/GCA_001117825.1_6949_1_21	-	SMRU2421
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.18969	39.5	-	CPMO01	77	2416	2194	3/22/15	3/4/17	Scaffold	SC	SAMEA682519	GCA_001117865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/865/GCA_001117865.1_5392_7_7	-	spnIC432
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35546	65.6	-	COJX01	79	4263	4079	3/22/15	3/11/17	Scaffold	SC	SAMEA1016084	GCA_001377235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/235/GCA_001377235.1_6972_6_17	-	0378M
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.06048	50.5	-	LQRW01	153	5266	4901	1/20/16	2/25/17	Contig	JCVI	SAMN03922907	GCA_001519115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/115/GCA_001519115.1_ASM151911v1	-	GN02007
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.67658	51.8	-	MXNG01	56	4668	4356	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356961	GCA_002035385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/385/GCA_002035385.1_ASM203538v1	-	BCW_1584
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.58261	32.9	-	LKZD01	167	2731	2450	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893347	GCA_002275515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/515/GCA_002275515.1_UCI12_v1.0	-	ST5:UCI 12
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.87879	32.8	-	LKZF01	183	3148	2820	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893349	GCA_002275545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/545/GCA_002275545.1_UCI14_v1.0	-	ST5:UCI 14
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.68459	51.6	-	MXOP01	104	4673	4306	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356948	GCA_002035405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/405/GCA_002035405.1_ASM203540v1	-	BCW_1542
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.20295	50.5	-	LQRX01	151	5476	5093	1/20/16	2/25/17	Contig	JCVI	SAMN03922908	GCA_001519125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/125/GCA_001519125.1_ASM151912v1	-	GN02009
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36292	65.6	-	COJC01	107	4285	4079	3/23/15	3/11/17	Scaffold	SC	SAMEA1016087	GCA_001377275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/275/GCA_001377275.1_6954_8_75	-	1239Y
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.0522	39.7	-	CMNB01	52	2260	2031	3/22/15	3/10/17	Scaffold	SC	SAMEA1029423	GCA_001117945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/945/GCA_001117945.1_7092_6_15	-	SMRU3111
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.186	39.5	-	CLSX01	105	2385	2164	3/21/15	3/11/17	Scaffold	SC	SAMEA1028911	GCA_001118005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/005/GCA_001118005.1_6972_4_13	-	SMRU2605
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3526	65.6	-	COJZ01	81	4276	4068	3/23/15	3/11/17	Scaffold	SC	SAMEA1016089	GCA_001377295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/295/GCA_001377295.1_6972_6_2	-	0188F
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.16797	50.6	-	LQRV01	102	5411	5077	1/20/16	2/25/17	Contig	JCVI	SAMN03922906	GCA_001519135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/135/GCA_001519135.1_ASM151913v1	-	GN02005
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.02166	52	-	MXNO01	212	5158	4912	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367612	GCA_002035415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/415/GCA_002035415.1_ASM203541v1	-	BCW_1573
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.75986	32.9	-	LKZE01	144	2971	2688	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893348	GCA_002275555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/555/GCA_002275555.1_UCI13_v1.0	-	ST5:UCI 13
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.84041	32.9	-	LKZG01	123	3010	2769	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893350	GCA_002275585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/585/GCA_002275585.1_UCI15_v1.0	-	ST5:UCI 15
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.98329	52.1	-	MXNW01	83	5144	4889	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367605	GCA_002035445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/445/GCA_002035445.1_ASM203544v1	-	BCW_1564
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	4.93993	50.6	-	LQUQ01	339	5152	4644	1/20/16	2/25/17	Contig	JCVI	SAMN03922945	GCA_001519145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/145/GCA_001519145.1_ASM151914v1	-	GN02606
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36842	65.6	-	COKS01	70	4274	4089	3/23/15	3/11/17	Scaffold	SC	SAMEA1016090	GCA_001377315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/315/GCA_001377315.1_6972_6_44	-	0567S
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.20136	39.5	-	CKAF01	72	2437	2209	3/21/15	3/11/17	Scaffold	SC	SAMEA974674	GCA_001118065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/065/GCA_001118065.1_6259_6_15	-	19B
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.06253	39.6	-	CRJM01	49	2286	2064	3/23/15	3/11/17	Scaffold	SC	SAMEA1025202	GCA_001118105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/105/GCA_001118105.1_6753_2_20	-	SMRU1509
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35714	65.6	-	COHN01	104	4274	4077	3/23/15	3/11/17	Scaffold	SC	SAMEA1016093	GCA_001377355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/355/GCA_001377355.1_6954_7_18	-	0940Y
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.16323	50.6	-	LQRU01	219	5508	5034	1/20/16	2/25/17	Contig	JCVI	SAMN03922013	GCA_001519195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/195/GCA_001519195.1_ASM151919v1	-	GN02004
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.63324	51.8	-	MXNZ01	64	4631	4312	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356956	GCA_002035465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/465/GCA_002035465.1_ASM203546v1	-	BCW_1560
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.31075	33	-	LKZI01	140	2374	2230	8/28/17	8/28/17	Scaffold	USDA-ARS	SAMN03893352	GCA_002275595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/595/GCA_002275595.1_UCI17_v1.0	-	ST5:UCI 17
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.91974	32.9	-	LKZN01	148	3131	2854	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893357	GCA_002275625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/625/GCA_002275625.1_UCI22_v1.0	-	ST5:UCI 22
"Salmonella enterica subsp. indica serovar 6,14,25:z10:1,(2),7"	1173949	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.67657	51.8	-	MXOB01	49	4684	4391	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367602	GCA_002035485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/485/GCA_002035485.1_ASM203548v1	-	BCW_1558
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.08967	50.5	-	LQRY01	120	5311	4965	1/20/16	2/25/17	Contig	JCVI	SAMN03922910	GCA_001519215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/215/GCA_001519215.1_ASM151921v1	-	GN02045
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.42634	65.5	-	COJV01	131	4292	4112	3/23/15	3/11/17	Scaffold	SC	SAMEA1016096	GCA_001377375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/375/GCA_001377375.1_6972_6_13	-	0555E
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12144	39.5	-	CLDH01	58	2341	2106	3/21/15	3/11/17	Scaffold	SC	SAMEA1025910	GCA_001118205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/205/GCA_001118205.1_6899_4_9	-	SMRU2025
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99301	39.8	-	CQQW01	39	2192	1983	3/22/15	3/11/17	Scaffold	SC	SAMEA970302	GCA_001118265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/265/GCA_001118265.1_5159_6_7	-	BHN383
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36507	65.6	-	COGE01	109	4294	4081	3/23/15	3/11/17	Scaffold	SC	SAMEA1016098	GCA_001377395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/395/GCA_001377395.1_6954_1_57	-	0218N
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.17947	50.6	-	LQSK01	112	5418	5100	1/20/16	2/25/17	Contig	JCVI	SAMN03922923	GCA_001519235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/235/GCA_001519235.1_ASM151923v1	-	GN02172
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.82846	52.1	-	MXOJ01	51	4925	4672	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356952	GCA_002035495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/495/GCA_002035495.1_ASM203549v1	-	BCW_1550
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.79244	33	-	LKZO01	311	3152	2626	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893358	GCA_002275635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/635/GCA_002275635.1_UCI23_v1.0	-	ST5:UCI 23
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.77957	32.9	-	LKZU01	247	3031	2667	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893364	GCA_002275665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/665/GCA_002275665.1_UCI29_v1.0	-	ST5:UCI 29
"Salmonella enterica subsp. diarizonae serovar 60:r:e,n,x,z15"	1173779	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.22717	51.3	-	MXOW01	192	5277	4806	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367588	GCA_002035545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/545/GCA_002035545.1_ASM203554v1	-	BCW_1534
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.30241	50.5	-	LQSU01	251	5598	5144	1/20/16	2/25/17	Contig	JCVI	SAMN03922934	GCA_001519245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/245/GCA_001519245.1_ASM151924v1	-	GN02277
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35065	65.6	-	COKM01	79	4271	4068	3/23/15	3/11/17	Scaffold	SC	SAMEA1016099	GCA_001377415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/415/GCA_001377415.1_6972_6_4	-	0285L
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09702	39.7	-	CKNX01	76	2332	2086	3/21/15	3/11/17	Scaffold	SC	SAMEA1024189	GCA_001118325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/325/GCA_001118325.1_6673_8_15	-	SMRU255
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.19559	39.5	-	CMRI01	188	2425	2168	3/23/15	3/11/17	Scaffold	SC	SAMEA2062167	GCA_001118365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/365/GCA_001118365.1_9803_8_38	-	38
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36141	65.6	-	COID01	115	4289	4080	3/23/15	3/11/17	Scaffold	SC	SAMEA1016100	GCA_001377435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/435/GCA_001377435.1_6954_7_39	-	0843S
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.08364	50.6	-	LQSJ01	343	5463	4936	1/20/16	2/25/17	Contig	JCVI	SAMN03922922	GCA_001519275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/275/GCA_001519275.1_ASM151927v1	-	GN02169
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.94505	52.2	-	MXOV01	73	5070	4797	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356946	GCA_002035555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/555/GCA_002035555.1_ASM203555v1	-	BCW_1535
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.65071	32.9	-	LKZT01	145	2805	2570	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893363	GCA_002275675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/675/GCA_002275675.1_UCI28_v1.0	-	ST5:UCI 28
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.86489	32.8	-	LLAB01	246	3192	2744	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893371	GCA_002275705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/705/GCA_002275705.1_UCI36_v1.0	-	ST5:UCI 36
"Salmonella enterica subsp. houtenae serovar 48:g,z51:-"	1050190	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.50093	51.7	-	MXOO01	42	4468	4118	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367594	GCA_002035575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/575/GCA_002035575.1_ASM203557v1	-	BCW_1543
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.2925	50.5	-	LQSI01	191	5586	5209	1/20/16	2/25/17	Contig	JCVI	SAMN03922921	GCA_001519285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/285/GCA_001519285.1_ASM151928v1	-	GN02165
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35701	65.6	-	COKI01	78	4276	4074	3/23/15	3/11/17	Scaffold	SC	SAMEA1016101	GCA_001377455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/455/GCA_001377455.1_6972_6_3	-	0190H
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.0596	39.6	-	CKEJ01	36	2259	1989	3/21/15	3/11/17	Scaffold	SC	SAMEA1023810	GCA_001118385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/385/GCA_001118385.1_6630_2_16	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.16641	39.5	-	CLBB01	72	2404	2142	3/21/15	3/10/17	Scaffold	SC	SAMEA1025923	GCA_001118445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/445/GCA_001118445.1_6871_1_12	-	SMRU1788
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35604	65.6	-	COKK01	55	4250	4077	3/22/15	3/11/17	Scaffold	SC	SAMEA1016104	GCA_001377475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/475/GCA_001377475.1_6972_6_32	-	0457Y
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.20166	50.4	-	LQSM01	117	5422	5072	1/20/16	2/25/17	Contig	JCVI	SAMN03922925	GCA_001519315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/315/GCA_001519315.1_ASM151931v1	-	GN02183
"Salmonella enterica subsp. arizonae serovar 48:z4,z23,z32:-"	1967583	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.31667	51.4	-	MXOX01	331	4470	3832	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367587	GCA_002035585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/585/GCA_002035585.1_ASM203558v1	-	BCW_1532
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.70457	32.9	-	LKZV01	148	2871	2624	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893365	GCA_002275715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/715/GCA_002275715.1_UCI30_v1.0	-	ST5:UCI 30
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.86415	32.8	-	LLAC01	264	3198	2690	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893372	GCA_002275745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/745/GCA_002275745.1_UCI37_v1.0	-	ST5:UCI 37
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.57374	52.1	-	MXJR01	14	4650	4401	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357021	GCA_002035625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/625/GCA_002035625.1_ASM203562v1	-	BCW_2018
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	4.91082	50.7	-	LQSP01	230	5220	4790	1/20/16	2/25/17	Contig	JCVI	SAMN03922930	GCA_001519335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/335/GCA_001519335.1_ASM151933v1	-	GN02247
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3554	65.6	-	COHO01	93	4283	4075	3/23/15	3/11/17	Scaffold	SC	SAMEA1016111	GCA_001377495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/495/GCA_001377495.1_6954_7_2	-	0438C
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.04097	39.7	-	CLAD01	59	2217	2000	3/21/15	3/11/17	Scaffold	SC	SAMEA1025962	GCA_001118465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/465/GCA_001118465.1_6840_3_23	-	SMRU1823
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10339	39.7	-	CKYJ01	78	2319	2122	3/21/15	3/11/17	Scaffold	SC	SAMEA1025295	GCA_001118565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/565/GCA_001118565.1_6830_3_15	-	SMRU1647
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38791	65.6	-	COJU01	76	4286	4097	3/23/15	3/11/17	Scaffold	SC	SAMEA1016113	GCA_001377515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/515/GCA_001377515.1_6972_6_14	-	0573Z
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.06199	50.7	-	LQSQ01	91	5222	4932	1/20/16	2/25/17	Contig	JCVI	SAMN03922926	GCA_001519355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/355/GCA_001519355.1_ASM151935v1	-	GN02196
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.8558	52.1	-	MXGX01	119	5044	4754	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367935	GCA_002035635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/635/GCA_002035635.1_ASM203563v1	-	BCW_2127
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.75581	32.9	-	LLAE01	107	2907	2695	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893374	GCA_002275755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/755/GCA_002275755.1_UCI39_v1.0	-	ST5:UCI 39
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.87701	32.8	-	LLAH01	160	3088	2796	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893377	GCA_002275785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/785/GCA_002275785.1_UCI42_v1.0	-	ST5:UCI 42
Salmonella enterica subsp. enterica serovar Urbana	260677	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.45346	52.3	-	MXMZ01	44	4487	4260	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367629	GCA_002035665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/665/GCA_002035665.1_ASM203566v1	-	BCW_1592
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.25491	50.5	-	LQSL01	155	5604	5230	1/20/16	2/25/17	Contig	JCVI	SAMN03922924	GCA_001519365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/365/GCA_001519365.1_ASM151936v1	-	GN02175
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36268	65.6	-	COHM01	100	4262	4082	3/22/15	3/11/17	Scaffold	SC	SAMEA1016114	GCA_001377535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/535/GCA_001377535.1_6954_7_17	-	0939X
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12656	39.6	-	CMKJ01	59	2351	2124	3/22/15	3/11/17	Scaffold	SC	SAMEA1029352	GCA_001118705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/705/GCA_001118705.1_7054_4_20	-	SMRU3044
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10081	39.5	-	CJZL01	67	2303	2062	3/21/15	3/11/17	Scaffold	SC	SAMEA974679	GCA_001118785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/785/GCA_001118785.1_6259_5_12	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34824	65.6	-	COKW01	77	4266	4068	3/23/15	3/11/17	Scaffold	SC	SAMEA1016117	GCA_001377555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/555/GCA_001377555.1_6972_6_5	-	0390A
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.27587	50.7	-	LQST01	374	5677	5148	1/20/16	2/25/17	Contig	JCVI	SAMN03922933	GCA_001519395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/395/GCA_001519395.1_ASM151939v1	-	GN02270
"Salmonella enterica subsp. diarizonae serovar 48:z10:e,n,x,z15"	1967589	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.17055	51.1	-	MXOT01	92	5204	4803	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367591	GCA_002035685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/685/GCA_002035685.1_ASM203568v1	-	BCW_1538
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.803	32.9	-	LLAQ01	184	3032	2736	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893386	GCA_002275795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/795/GCA_002275795.1_UCI51_v1.0	-	ST5:UCI 51
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.47542	32.9	-	LLAU01	156	2565	2373	8/28/17	8/28/17	Scaffold	USDA-ARS	SAMN03893390	GCA_002275815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/815/GCA_002275815.1_UCI55_v1.0	-	ST5:UCI 55
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83227	51.4	-	MXOQ01	73	4833	4487	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356947	GCA_002035695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/695/GCA_002035695.1_ASM203569v1	-	BCW_1541
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	4.91578	50.6	-	LQSB01	98	5116	4811	1/20/16	2/25/17	Contig	JCVI	SAMN03922914	GCA_001519405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/405/GCA_001519405.1_ASM151940v1	-	GN02091
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34803	65.6	-	COKQ01	76	4270	4068	3/23/15	3/11/17	Scaffold	SC	SAMEA1016118	GCA_001377575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/575/GCA_001377575.1_6972_6_41	-	0510F
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.14835	39.7	-	CMWH01	121	2274	1986	3/23/15	3/11/17	Scaffold	SC	SAMEA1022856	GCA_001118825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/825/GCA_001118825.1_5919_1_1	-	103
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11258	39.6	-	CMPK01	49	2318	2052	3/23/15	3/4/17	Scaffold	SC	SAMEA2061725	GCA_001118865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/865/GCA_001118865.1_9803_7_61	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35629	65.6	-	COKJ01	82	4276	4079	3/23/15	3/11/17	Scaffold	SC	SAMEA1016120	GCA_001377595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/595/GCA_001377595.1_6972_6_31	-	0450Q
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.10831	50.6	-	LQRZ01	211	5418	5029	1/20/16	2/25/17	Contig	JCVI	SAMN03922911	GCA_001519435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/435/GCA_001519435.1_ASM151943v1	-	GN02050
Salmonella enterica subsp. diarizonae serovar 60:r:z	1967590	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.62594	51.8	-	MXOR01	71	4674	4304	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367593	GCA_002035705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/705/GCA_002035705.1_ASM203570v1	-	BCW_1540
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.82606	32.8	-	LLAW01	87	2992	2803	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893392	GCA_002275825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/825/GCA_002275825.1_UCI57_v1.0	-	ST5:UCI 57
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.8085	32.8	-	LLAY01	132	3007	2728	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893394	GCA_002275865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/865/GCA_002275865.1_UCI59_v1.0	-	ST5:UCI 59
"Salmonella enterica subsp. diarizonae serovar 61:k:1,5,7"	1160729	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.64027	52.3	-	MXOU01	70	4686	4434	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367589	GCA_002035715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/715/GCA_002035715.1_ASM203571v1	-	BCW_1536
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.07393	50.8	-	LQSA01	167	5356	5005	1/20/16	2/25/17	Contig	JCVI	SAMN03922912	GCA_001519445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/445/GCA_001519445.1_ASM151944v1	-	GN02055
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35502	65.6	-	COGD01	93	4267	4085	3/23/15	3/11/17	Scaffold	SC	SAMEA1016123	GCA_001377615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/615/GCA_001377615.1_6954_1_58	-	0219P
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.09548	39.7	-	CLRP01	53	2335	2115	3/21/15	3/4/17	Scaffold	SC	SAMEA1028794	GCA_001118885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/885/GCA_001118885.1_6972_3_11	-	SMRU2579
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14143	39.6	-	CKAT01	82	2383	2142	3/21/15	3/4/17	Scaffold	SC	SAMEA974623	GCA_001118925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/925/GCA_001118925.1_6259_6_6	-	23A
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35526	65.6	-	COKR01	83	4273	4076	3/23/15	3/11/17	Scaffold	SC	SAMEA1016124	GCA_001377635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/635/GCA_001377635.1_6972_6_42	-	0511G
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.09988	50.4	-	LQSH01	91	5227	4911	1/20/16	2/25/17	Contig	JCVI	SAMN03922920	GCA_001519475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/475/GCA_001519475.1_ASM151947v1	-	GN02163
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.99407	52.2	-	MXOZ01	489	5445	4860	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356943	GCA_002035765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/765/GCA_002035765.1_ASM203576v1	-	BCW_1530
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.79192	33	-	LLBI01	296	3173	2628	8/28/17	9/18/17	Scaffold	USDA-ARS	SAMN03893330	GCA_002275875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/875/GCA_002275875.1_UCSF13938_v1.0	-	BD13938
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.82378	32.8	-	LLBH01	109	2985	2750	8/28/17	9/18/17	Scaffold	USDA-ARS	SAMN03893329	GCA_002275885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/885/GCA_002275885.1_UCSF13582_v1.0	-	BD13582
"Salmonella enterica subsp. arizonae serovar 48:g,z51:-"	1967582	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.57039	51.4	-	MXPC01	61	4643	4194	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367585	GCA_002035775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/775/GCA_002035775.1_ASM203577v1	-	BCW_1526
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.23858	50.5	-	LQVU01	199	5511	5084	1/20/16	2/25/17	Contig	JCVI	SAMN04388553	GCA_001519485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/485/GCA_001519485.1_ASM151948v1	-	GN03398
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39367	65.6	-	COIJ01	105	4309	4102	3/23/15	3/11/17	Scaffold	SC	SAMEA1016134	GCA_001377695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/695/GCA_001377695.1_6954_7_6	-	0445K
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.17587	39.6	-	CMGK01	63	2356	2111	3/22/15	3/4/17	Scaffold	SC	SAMEA1029425	GCA_001118945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/945/GCA_001118945.1_7038_4_21	-	SMRU2949
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.98773	39.8	-	CQRR01	47	2206	1989	3/22/15	3/4/17	Scaffold	SC	SAMEA970213	GCA_001118985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/985/GCA_001118985.1_5159_8_7	-	BHN650
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35876	65.6	-	COJG01	110	4278	4083	3/23/15	3/11/17	Scaffold	SC	SAMEA1016139	GCA_001377715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/715/GCA_001377715.1_6954_8_84	-	1471A
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.17	50.6	-	LQSN01	219	5451	4976	1/20/16	2/25/17	Contig	JCVI	SAMN03922928	GCA_001519515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/515/GCA_001519515.1_ASM151951v1	-	GN02215
"Salmonella enterica subsp. arizonae serovar 48:g,z51:-"	1967582	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.45549	51.4	-	MXPB01	56	4485	4051	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367586	GCA_002035795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/795/GCA_002035795.1_ASM203579v1	-	BCW_1528
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.70583	32.8	-	LLBL01	100	2813	2611	8/28/17	9/18/17	Scaffold	USDA-ARS	SAMN03893333	GCA_002275895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/895/GCA_002275895.1_UCSF14436_v1.0	-	BD14436
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.70986	32.8	-	LLBN01	118	2807	2593	8/28/17	9/18/17	Scaffold	USDA-ARS	SAMN03893335	GCA_002275945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/945/GCA_002275945.1_UCSF14811_v1.0	-	BD14811
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.39107	51.8	-	MXPD01	193	5599	5220	3/17/17	4/11/17	Contig	University of California at Davis	SAMN03356940	GCA_002035805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/805/GCA_002035805.1_ASM203580v1	-	BCW_1525
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	4.97421	50.6	-	LQSO01	110	5045	4769	1/20/16	2/25/17	Contig	JCVI	SAMN03922929	GCA_001519525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/525/GCA_001519525.1_ASM151952v1	-	GN02235
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38524	65.6	-	COKN01	68	4282	4105	3/23/15	3/11/17	Scaffold	SC	SAMEA1016140	GCA_001377735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/735/GCA_001377735.1_6972_6_34	-	0473Q
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.0098	39.7	-	CLJG01	76	2232	2010	3/21/15	3/4/17	Scaffold	SC	SAMEA1028841	GCA_001119005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/005/GCA_001119005.1_6925_7_21	-	SMRU2517
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.20971	39.5	-	CLFE01	99	2445	2192	3/21/15	3/4/17	Scaffold	SC	SAMEA1026200	GCA_001119025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/025/GCA_001119025.1_6899_7_18	-	SMRU2106
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35471	65.6	-	COKB01	73	4264	4071	3/22/15	3/11/17	Scaffold	SC	SAMEA1016143	GCA_001377775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/775/GCA_001377775.1_6972_6_20	-	0383S
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.18042	50.6	-	LQSS01	105	5432	5102	1/20/16	2/25/17	Contig	JCVI	SAMN03922932	GCA_001519555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/555/GCA_001519555.1_ASM151955v1	-	GN02260
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.8735	51.9	-	MXPG01	101	5021	4752	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356938	GCA_002035845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/845/GCA_002035845.1_ASM203584v1	-	BCW_1522
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.52985	33	-	LLBO01	256	2619	2382	8/28/17	8/28/17	Scaffold	USDA-ARS	SAMN03893317	GCA_002275955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/955/GCA_002275955.1_UMN-1_v1.0	-	ST5:MN 1
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.83028	32.8	-	LLBP01	143	2986	2763	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893318	GCA_002275965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/965/GCA_002275965.1_UMN-2_v1.0	-	ST5:MN 2
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89896	51.8	-	MXPE01	92	4877	4491	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356939	GCA_002035865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/865/GCA_002035865.1_ASM203586v1	-	BCW_1524
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	4.69892	50.7	-	LQTK01	146	4923	4539	1/20/16	2/25/17	Contig	JCVI	SAMN03922964	GCA_001519575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/575/GCA_001519575.1_ASM151957v1	-	GN02380
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36634	65.6	-	COGP01	88	4275	4094	3/23/15	3/11/17	Scaffold	SC	SAMEA1016144	GCA_001377795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/795/GCA_001377795.1_6954_1_74	-	0101L
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.13574	39.6	-	CLKE01	66	2365	2128	3/21/15	3/4/17	Scaffold	SC	SAMEA1028940	GCA_001119065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/065/GCA_001119065.1_6925_8_5	-	SMRU2525
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08696	39.6	-	CKWM01	59	2293	2073	3/21/15	3/4/17	Scaffold	SC	SAMEA1026045	GCA_001119105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/105/GCA_001119105.1_6823_5_22	-	SMRU1966
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38082	65.6	-	COKL01	72	4278	4096	3/23/15	3/11/17	Scaffold	SC	SAMEA1016145	GCA_001377815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/815/GCA_001377815.1_6972_6_38	-	0502X
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.12671	50.4	-	LQTA01	219	5409	4928	1/20/16	2/25/17	Contig	JCVI	SAMN03922953	GCA_001519595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/595/GCA_001519595.1_ASM151959v1	-	GN02323
"Salmonella enterica subsp. salamae serovar 13,22:z29:enx"	1967613	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.99097	51.9	-	MXPF01	97	5083	4727	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367584	GCA_002035875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/875/GCA_002035875.1_ASM203587v1	-	BCW_1523
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.81123	32.8	-	LLBV01	103	2957	2745	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893322	GCA_002275985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/275/985/GCA_002275985.1_UMN6_v1.0	-	ST5:MN 6
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.79542	32.8	-	LLBW01	137	2946	2703	8/28/17	8/30/17	Scaffold	USDA-ARS	SAMN03893323	GCA_002276025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/276/025/GCA_002276025.1_UMN7_v1.0	-	ST5:MN 7
Salmonella enterica subsp. salamae serovar 53:lz28:z39	1967622	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.63267	52.1	-	MXPH01	22	4556	4300	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367583	GCA_002035885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/885/GCA_002035885.1_ASM203588v1	-	BCW_1521
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.10448	50.6	-	LQUX01	262	5426	4900	1/20/16	2/25/17	Contig	JCVI	SAMN04388528	GCA_001519615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/615/GCA_001519615.1_ASM151961v1	-	GN02649
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35853	65.6	-	COIA01	107	4289	4076	3/23/15	3/11/17	Scaffold	SC	SAMEA1016147	GCA_001377835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/835/GCA_001377835.1_6954_7_32	-	0834H
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.19542	39.4	-	CLFX01	74	2439	2209	3/21/15	3/4/17	Scaffold	SC	SAMEA1025833	GCA_001119145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/145/GCA_001119145.1_6925_3_22	-	SMRU2134
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05609	39.5	-	CLZN01	56	2266	2031	3/21/15	3/4/17	Scaffold	SC	SAMEA1028694	GCA_001119165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/165/GCA_001119165.1_6983_8_93	-	SMRU2397
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36251	65.6	-	COHS01	115	4287	4086	3/22/15	3/11/17	Scaffold	SC	SAMEA1016151	GCA_001377875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/875/GCA_001377875.1_6954_7_23	-	0807D
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.22581	50.7	-	LQTF01	296	5627	5125	1/20/16	2/25/17	Contig	JCVI	SAMN03922958	GCA_001519635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/635/GCA_001519635.1_ASM151963v1	-	GN02354
Salmonella enterica subsp. enterica serovar Brandenburg	149387	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.619	52.2	-	MXPM01	203	4749	4399	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367578	GCA_002035925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/925/GCA_002035925.1_ASM203592v1	-	BCW_1516
Staphylococcus aureus	1280	PRJNA295560	295560	Terrabacteria group	Firmicutes	2.44137	33.1	-	LKYR01	201	2564	2287	9/14/17	9/14/17	Scaffold	USDA-ARS	SAMN04075785	GCA_002303755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/755/GCA_002303755.1_ISUMRS926_v1.0	-	ST398:ISU 926
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.78036	32.8	-	LLBF01	106	2869	2717	9/14/17	9/14/17	Scaffold	USDA-ARS	SAMN03893327	GCA_002303825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/825/GCA_002303825.1_UCSF12072_v1.0	-	BD12072
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.74802	52	-	MXPP01	56	4919	4581	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367576	GCA_002035945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/945/GCA_002035945.1_ASM203594v1	-	BCW_1512
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.07493	50.5	-	LQUW01	206	5370	4866	1/20/16	2/25/17	Contig	JCVI	SAMN04388527	GCA_001519645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/645/GCA_001519645.1_ASM151964v1	-	GN02639
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37483	65.6	-	COGR01	96	4293	4101	3/23/15	3/11/17	Scaffold	SC	SAMEA1016158	GCA_001377915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/915/GCA_001377915.1_6954_1_75	-	0113Z
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.03209	39.7	-	CKUU01	75	2218	2022	3/21/15	3/4/17	Scaffold	SC	SAMEA1026131	GCA_001119205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/205/GCA_001119205.1_6823_3_18	-	SMRU1914
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.13322	39.7	-	CMWV01	101	2286	1992	3/23/15	3/6/17	Scaffold	SC	SAMEA1022849	GCA_001119385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/385/GCA_001119385.1_6406_5_7	-	410
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35669	65.6	-	COKP01	86	4281	4082	3/23/15	3/11/17	Scaffold	SC	SAMEA1016159	GCA_001377935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/935/GCA_001377935.1_6972_6_39	-	0508D
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.18435	50.5	-	LQSE01	109	5411	5043	1/20/16	2/25/17	Contig	JCVI	SAMN03922917	GCA_001519675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/675/GCA_001519675.1_ASM151967v1	-	GN02137
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.67089	52.2	-	MXPO01	59	4701	4482	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367577	GCA_002035955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/955/GCA_002035955.1_ASM203595v1	-	BCW_1514
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.94365	32.7	-	LLBE01	126	3111	2925	9/14/17	9/14/17	Scaffold	USDA-ARS	SAMN03893326	GCA_002303835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/303/835/GCA_002303835.1_UCSF11451_v1.0	-	BD11451
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.74212	32.9	-	LKXR01	114	2856	2644	8/28/17	9/18/17	Scaffold	USDA-ARS	SAMN03893283	GCA_002304615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/615/GCA_002304615.1_ISU-954_v1.0	-	ST5:ISU 954
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.71331	52.2	-	MXPS01	63	4788	4575	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367573	GCA_002035985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/985/GCA_002035985.1_ASM203598v1	-	BCW_1509
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.2016	50.7	-	LQSC01	125	5406	5108	1/20/16	2/25/17	Contig	JCVI	SAMN03922915	GCA_001519685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/685/GCA_001519685.1_ASM151968v1	-	GN02094
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3567	65.6	-	COJY01	62	4258	4082	3/23/15	3/11/17	Scaffold	SC	SAMEA1016160	GCA_001377955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/377/955/GCA_001377955.1_6972_6_18	-	0379N
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.19716	39.6	-	CKBV01	82	2452	2186	3/21/15	3/4/17	Scaffold	SC	SAMEA974642	GCA_001119405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/405/GCA_001119405.1_6259_8_7	-	14
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	1.98513	39.6	-	CKWC01	52	2175	1971	3/21/15	3/11/17	Scaffold	SC	SAMEA1025981	GCA_001119525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/525/GCA_001119525.1_6823_5_18	-	SMRU1962
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36136	65.6	-	COIW01	109	4274	4070	3/22/15	3/11/17	Scaffold	SC	SAMEA1016167	GCA_001378035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/035/GCA_001378035.1_6954_8_65	-	1627V
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.12851	50.6	-	LQSD01	97	5351	5031	1/20/16	2/25/17	Contig	JCVI	SAMN03922916	GCA_001519715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/715/GCA_001519715.1_ASM151971v1	-	GN02099
Salmonella enterica subsp. diarizonae serovar 38:z10:z53	1160728	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.75992	51.6	-	MXOS01	66	4744	4403	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367592	GCA_002035995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/035/995/GCA_002035995.1_ASM203599v1	-	BCW_1539
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.76181	32.9	-	LKWK01	113	2918	2657	8/28/17	10/2/17	Scaffold	USDA-ARS	SAMN03893250	GCA_002304635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/304/635/GCA_002304635.1_ISU-909_v1.0	-	ISU 909
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.0431	52	-	MXPT01	214	5223	4971	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367572	GCA_002036025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/025/GCA_002036025.1_ASM203602v1	-	BCW_1508
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.16189	50.6	-	LQSR01	109	5411	5082	1/20/16	2/25/17	Contig	JCVI	SAMN03922931	GCA_001519735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/735/GCA_001519735.1_ASM151973v1	-	GN02254
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35753	65.6	-	COKO01	80	4278	4072	3/23/15	3/11/17	Scaffold	SC	SAMEA1016171	GCA_001378055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/055/GCA_001378055.1_6972_6_36	-	0478W
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11854	39.5	-	CKCD01	67	2325	2090	3/21/15	3/11/17	Scaffold	SC	SAMEA1024055	GCA_001119565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/565/GCA_001119565.1_6593_4_18	-	19A
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.21862	39.8	-	CLVW01	64	2424	2162	3/21/15	3/14/17	Scaffold	SC	SAMEA1026001	GCA_001119625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/625/GCA_001119625.1_6983_3_71	-	SMRU2279
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36186	65.6	-	COIV01	105	4283	4078	3/22/15	3/11/17	Scaffold	SC	SAMEA1016172	GCA_001378075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/075/GCA_001378075.1_6954_8_63	-	1623Q
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.18192	50.6	-	LQSG01	113	5439	5112	1/20/16	2/25/17	Contig	JCVI	SAMN03922919	GCA_001519755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/755/GCA_001519755.1_ASM151975v1	-	GN02148
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.55338	51.4	-	MXOY01	92	4623	4130	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356944	GCA_002036045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/045/GCA_002036045.1_ASM203604v1	-	BCW_1531
Staphylococcus aureus 930918-3	452948	PRJNA20007	20007	Terrabacteria group	Firmicutes	2.92346	32.7	-	ABFA01	736	3039	2871	9/24/09	3/2/17	Contig	University of Central Florida	SAMN02471355	GCA_000171435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/435/GCA_000171435.1_ASM17143v1	18808706	930918-3
Staphylococcus aureus D30	455227	PRJNA19993	19993	Terrabacteria group	Firmicutes	2.77562	32.7	-	ABFB01	463	2823	2697	9/24/09	3/2/17	Contig	University of Central Florida	SAMN02471356	GCA_000171455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/455/GCA_000171455.1_ASM17145v1	18808706	D30
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.5203	51.5	-	MXPA01	70	4537	4080	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356942	GCA_002036055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/055/GCA_002036055.1_ASM203605v1	-	BCW_1529
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.1468	50.6	-	LQSF01	166	5381	4962	1/20/16	2/25/17	Contig	JCVI	SAMN03922918	GCA_001519775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/775/GCA_001519775.1_ASM151977v1	-	GN02140
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35804	65.6	-	COIN01	105	4277	4083	3/23/15	3/11/17	Scaffold	SC	SAMEA1016174	GCA_001378095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/095/GCA_001378095.1_6954_8_49	-	type strain: 0913
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	1.97756	39.7	-	CMBV01	50	2181	1975	3/21/15	3/11/17	Scaffold	SC	SAMEA1029363	GCA_001119645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/645/GCA_001119645.1_7004_7_65	-	SMRU2897
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.13047	39.5	-	CLDY01	57	2348	2091	3/21/15	3/11/17	Scaffold	SC	SAMEA1025726	GCA_001119725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/725/GCA_001119725.1_6899_6_20	-	SMRU2084
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36231	65.6	-	COIM01	111	4288	4079	3/23/15	3/11/17	Scaffold	SC	SAMEA1016175	GCA_001378115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/115/GCA_001378115.1_6954_7_8	-	0465G
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	4.68584	50.6	-	LQTJ01	161	4951	4492	1/20/16	2/25/17	Contig	JCVI	SAMN03922963	GCA_001519795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/795/GCA_001519795.1_ASM151979v1	-	GN02375
Salmonella enterica subsp. salamae serovar 50:b:z6	1967621	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.91273	51.8	-	MXPI01	176	4880	4569	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367582	GCA_002036085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/085/GCA_002036085.1_ASM203608v1	-	BCW_1520
Staphylococcus aureus subsp. aureus str. JKD6009	546343	PRJNA29569	29569	Terrabacteria group	Firmicutes	2.81945	32.7	-	ABSA01	129	2935	2819	7/10/08	3/2/17	Contig	Monash University	SAMN02470553	GCA_000172855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/172/855/GCA_000172855.1_ASM17285v1	-	JKD6009
Staphylococcus aureus A5937	553565	PRJNA36465	36465	Terrabacteria group	Firmicutes	2.82727	32.8	-	ACKC01	32	2951	2829	9/11/09	3/2/17	Contig	Broad Institute	SAMN02595317	GCA_000174455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/455/GCA_000174455.1_ASM17445v1	22492855	A5937
Salmonella enterica subsp. salamae serovar 48:d:z6	1151170	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.96579	51.9	-	MXPJ01	96	4965	4625	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367581	GCA_002036095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/095/GCA_002036095.1_ASM203609v1	-	BCW_1519
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.10082	50.5	-	LQSX01	198	5336	4866	1/20/16	2/25/17	Contig	JCVI	SAMN03922937	GCA_001519815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/815/GCA_001519815.1_ASM151981v1	-	GN02298
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36587	65.6	-	COGI01	108	4293	4092	3/23/15	3/11/17	Scaffold	SC	SAMEA1016176	GCA_001378135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/135/GCA_001378135.1_6954_1_62	-	0403P
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.02894	39.7	-	CKEL01	68	2222	1935	3/21/15	3/14/17	Scaffold	SC	SAMEA1023776	GCA_001119785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/785/GCA_001119785.1_6630_2_18	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.15463	39.7	-	CMUL01	144	2297	2056	3/22/15	3/11/17	Scaffold	SC	SAMEA1022952	GCA_001120045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/045/GCA_001120045.1_5737_6_9	-	151
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36299	65.6	-	COJD01	93	4270	4081	3/22/15	3/11/17	Scaffold	SC	SAMEA1016178	GCA_001378155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/155/GCA_001378155.1_6954_8_80	-	1466V
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.13294	50.6	-	LQSW01	185	5376	4964	1/20/16	2/25/17	Contig	JCVI	SAMN03922936	GCA_001519835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/835/GCA_001519835.1_ASM151983v1	-	GN02290
Salmonella enterica subsp. salamae serovar 47:d:z39	1967620	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.98956	51.9	-	MXPK01	134	5056	4717	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367580	GCA_002036105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/105/GCA_002036105.1_ASM203610v1	-	BCW_1518
Staphylococcus aureus A5948	553567	PRJNA36467	36467	Terrabacteria group	Firmicutes	2.84611	32.6	-	ACKD01	65	2978	2866	9/11/09	3/2/17	Contig	Broad Institute	SAMN02595318	GCA_000174475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/475/GCA_000174475.1_ASM17447v1	-	A5948
Staphylococcus aureus A6224	553568	PRJNA36469	36469	Terrabacteria group	Firmicutes	2.87023	32.8	-	ACKE01	49	3014	2887	9/11/09	3/2/17	Contig	Broad Institute	SAMN02595319	GCA_000174495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/495/GCA_000174495.1_ASM17449v1	22492855	A6224
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.63451	52.2	-	MXPN01	61	4702	4457	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356937	GCA_002036145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/145/GCA_002036145.1_ASM203614v1	-	BCW_1515
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	4.97322	50.4	-	LQSZ01	244	5324	4798	1/20/16	2/25/17	Contig	JCVI	SAMN03922952	GCA_001519855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/855/GCA_001519855.1_ASM151985v1	-	GN02317
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38204	65.6	-	COIB01	104	4294	4095	3/23/15	3/11/17	Scaffold	SC	SAMEA1016179	GCA_001378175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/175/GCA_001378175.1_6954_7_34	-	0836K
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.21538	39.4	-	CKVA01	82	2443	2182	3/21/15	3/11/17	Scaffold	SC	SAMEA1026146	GCA_001120125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/125/GCA_001120125.1_6823_3_21	-	SMRU1917
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.02208	39.6	-	CKBN01	86	2205	1996	3/21/15	3/11/17	Scaffold	SC	SAMEA974651	GCA_001120205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/205/GCA_001120205.1_6259_8_15	-	35F
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35835	65.6	-	COJF01	96	4274	4084	3/23/15	3/11/17	Scaffold	SC	SAMEA1016185	GCA_001378195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/195/GCA_001378195.1_6954_8_82	-	1469Y
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	4.8312	50.5	-	LQTB01	45	4931	4677	1/20/16	2/25/17	Contig	JCVI	SAMN03922954	GCA_001519875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/875/GCA_001519875.1_ASM151987v1	-	GN02337
"Salmonella enterica subsp. salamae serovar 58:l,z13,z28:z6"	1160778	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.11824	51.6	-	MXPL01	69	5132	4803	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367579	GCA_002036155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/155/GCA_002036155.1_ASM203615v1	-	BCW_1517
Staphylococcus aureus A6300	553571	PRJNA36471	36471	Terrabacteria group	Firmicutes	2.81665	32.8	-	ACKF01	49	2930	2809	9/11/09	3/2/17	Contig	Broad Institute	SAMN02595320	GCA_000174515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/515/GCA_000174515.1_ASM17451v1	22492855	A6300
Staphylococcus aureus A8115	553573	PRJNA36473	36473	Terrabacteria group	Firmicutes	2.74696	32.7	-	ACKG01	38	2862	2737	9/11/09	3/2/17	Contig	Broad Institute	SAMN02595321	GCA_000174535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/535/GCA_000174535.1_ASM17453v1	-	A8115
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.71138	52.2	-	MXPR01	55	4787	4581	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367574	GCA_002036185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/185/GCA_002036185.1_ASM203618v1	-	BCW_1510
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.16972	50.6	-	LQTD01	347	5671	5052	1/20/16	2/25/17	Contig	JCVI	SAMN03922956	GCA_001519895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/895/GCA_001519895.1_ASM151989v1	-	GN02345
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36105	65.6	-	COIX01	114	4283	4079	3/23/15	3/11/17	Scaffold	SC	SAMEA1016187	GCA_001378235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/235/GCA_001378235.1_6954_8_64	-	type strain: 1626
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21334	39.5	-	CPST01	102	2454	2211	3/23/15	3/11/17	Scaffold	SC	SAMEA1408308	GCA_001120225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/225/GCA_001120225.1_7444_8_9	-	9608+02116
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08009	39.7	-	CQVN01	44	2294	2064	3/22/15	3/11/17	Scaffold	SC	SAMEA1025395	GCA_001120265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/265/GCA_001120265.1_6710_8_17	-	SMRU1409
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37381	65.6	-	CHXO01	94	4289	4101	4/21/15	3/11/17	Scaffold	SC	SAMEA1016190	GCA_001378275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/275/GCA_001378275.1_6954_8_62	-	1617J
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.29721	50.9	-	LQUV01	438	5824	5156	1/20/16	2/25/17	Contig	JCVI	SAMN04388526	GCA_001519915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/915/GCA_001519915.1_ASM151991v1	-	GN02631
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.96998	52.1	-	MXPQ01	102	5129	4874	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367575	GCA_002036205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/205/GCA_002036205.1_ASM203620v1	-	BCW_1511
Staphylococcus aureus A9299	553581	PRJNA36475	36475	Terrabacteria group	Firmicutes	2.78218	32.8	-	ACKH01	48	2923	2787	9/11/09	3/2/17	Contig	Broad Institute	SAMN02595322	GCA_000174555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/555/GCA_000174555.1_ASM17455v1	-	A9299
Staphylococcus aureus A9635	553583	PRJNA36477	36477	Terrabacteria group	Firmicutes	2.73126	32.8	-	ACKI01	40	2849	2682	9/11/09	3/2/17	Contig	Broad Institute	SAMN02595323	GCA_000174575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/575/GCA_000174575.1_ASM17457v1	22492855	A9635
Salmonella enterica subsp. enterica serovar Mbandaka	192954	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.74778	52.2	-	MXEU01	63	4846	4590	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368017	GCA_002036225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/225/GCA_002036225.1_ASM203622v1	-	N32055
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.22394	50.7	-	LQUO01	337	5758	5160	1/20/16	2/25/17	Contig	JCVI	SAMN03922999	GCA_001519935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/935/GCA_001519935.1_ASM151993v1	-	GN02567
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36152	65.6	-	COHQ01	112	4289	4075	3/23/15	3/11/17	Scaffold	SC	SAMEA1016196	GCA_001378335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/335/GCA_001378335.1_6954_7_21	-	0944C
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12242	39.6	-	CMNE01	63	2291	2037	3/23/15	3/11/17	Scaffold	SC	SAMEA1029372	GCA_001120285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/285/GCA_001120285.1_7092_6_12	-	SMRU3108
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04587	39.5	-	CKLP01	104	2242	1997	3/21/15	3/14/17	Scaffold	SC	SAMEA1024000	GCA_001120305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/305/GCA_001120305.1_6641_6_22	-	15B
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36522	65.6	-	CHXM01	108	4294	4078	4/21/15	3/11/17	Scaffold	SC	SAMEA1016197	GCA_001378355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/355/GCA_001378355.1_6954_7_36	-	0839N
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.35627	50.5	-	LQVC01	426	5827	5134	1/20/16	2/25/17	Contig	JCVI	SAMN04388533	GCA_001519945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/945/GCA_001519945.1_ASM151994v1	-	GN02690
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.96495	52	-	MXES01	89	5078	4777	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368020	GCA_002036235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/235/GCA_002036235.1_ASM203623v1	-	BCW_2216
Staphylococcus aureus A9719	553588	PRJNA36479	36479	Terrabacteria group	Firmicutes	2.85696	32.8	-	ACKJ01	60	2997	2867	9/11/09	3/2/17	Contig	Broad Institute	SAMN02595324	GCA_000174595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/595/GCA_000174595.1_ASM17459v1	-	A9719
Staphylococcus aureus A9763	553592	PRJNA36481	36481	Terrabacteria group	Firmicutes	2.76986	32.8	-	ACKK01	41	2878	2749	9/11/09	3/2/17	Contig	Broad Institute	SAMN02595325	GCA_000174615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/615/GCA_000174615.1_ASM17461v1	-	A9763
Salmonella enterica subsp. enterica serovar Braenderup	149391	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69692	52.2	-	MXER01	156	4815	4533	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368021	GCA_002036245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/245/GCA_002036245.1_ASM203624v1	-	N32758
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.20287	50.7	-	LQTQ01	150	5472	5140	1/20/16	2/25/17	Contig	JCVI	SAMN03922972	GCA_001519975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/975/GCA_001519975.1_ASM151997v1	-	GN02415
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36312	65.6	-	COIC01	92	4261	4088	3/22/15	3/11/17	Scaffold	SC	SAMEA1016198	GCA_001378375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/375/GCA_001378375.1_6954_7_35	-	0838M
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10074	39.6	-	CKWO01	60	2322	2088	3/21/15	3/4/17	Scaffold	SC	SAMEA1025907	GCA_001120485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/485/GCA_001120485.1_6823_5_3	-	SMRU1947
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11671	39.7	-	CKGQ01	44	2278	2021	3/21/15	3/15/17	Scaffold	SC	SAMEA1024081	GCA_001120565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/565/GCA_001120565.1_6631_1_22	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37368	65.6	-	COHD01	91	4288	4099	3/23/15	3/11/17	Scaffold	SC	SAMEA1016201	GCA_001378395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/395/GCA_001378395.1_6954_1_89	-	0030J
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.29363	50.9	-	LQUI01	390	5832	5231	1/20/16	2/25/17	Contig	JCVI	SAMN03922993	GCA_001519995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/519/995/GCA_001519995.1_ASM151999v1	-	GN02535
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.11761	51.9	-	MXEG01	73	5238	4956	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357030	GCA_002036285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/285/GCA_002036285.1_ASM203628v1	-	BCW_2239
Staphylococcus aureus A9781	553596	PRJNA36483	36483	Terrabacteria group	Firmicutes	2.82217	32.7	-	ACKL01	50	2967	2831	8/21/09	3/2/17	Contig	Broad Institute	SAMN02595326	GCA_000174635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/635/GCA_000174635.1_ASM17463v1	-	A9781
Staphylococcus aureus subsp. aureus 132	644279	PRJNA37915	37915	Terrabacteria group	Firmicutes	2.82536	32.7	-	ACOT01	46	2980	2871	7/16/09	3/2/17	Contig	Universidad Pública de Navarra	SAMN02471370	GCA_000174955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/174/955/GCA_000174955.1_ASM17495v1	19581398	132
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.96533	52.1	-	MXDX01	81	5136	4874	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368050	GCA_002036305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/305/GCA_002036305.1_ASM203630v1	-	BCW_2251
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.25931	50.6	-	LQTI01	201	5600	5210	1/20/16	2/25/17	Contig	JCVI	SAMN03922962	GCA_001520015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/015/GCA_001520015.1_ASM152001v1	-	GN02370
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36075	65.6	-	COXM01	109	4286	4079	3/23/15	3/11/17	Scaffold	SC	SAMEA1403548	GCA_001378435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/435/GCA_001378435.1_7841_6_22	-	1830Q
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08101	39.7	-	CMBA01	51	2326	2113	3/21/15	3/4/17	Scaffold	SC	SAMEA1029172	GCA_001120585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/585/GCA_001120585.1_7004_6_36	-	SMRU2844
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.03345	39.7	-	CPKP01	196	2196	1994	3/23/15	3/4/17	Scaffold	SC	SAMEA1020558	GCA_001120705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/705/GCA_001120705.1_5749_6_8	-	LMG87
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36903	65.6	-	COZM01	114	4295	4089	3/23/15	3/11/17	Scaffold	SC	SAMEA1403549	GCA_001378455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/455/GCA_001378455.1_7841_7_89	-	2070B
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.24619	50.8	-	LQTL01	261	5691	5163	1/20/16	2/25/17	Contig	JCVI	SAMN03922965	GCA_001520035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/035/GCA_001520035.1_ASM152003v1	-	GN02388
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.98861	52	-	MXDV01	149	5136	4882	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368508	GCA_002036315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/315/GCA_002036315.1_ASM203631v1	-	BCW_2427
Staphylococcus aureus A9765	553594	PRJNA39221	39221	Terrabacteria group	Firmicutes	2.88795	32.7	-	ACSN01	86	3060	2936	12/30/09	3/2/17	Contig	Broad Institute	SAMN02595336	GCA_000175475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/475/GCA_000175475.1_ASM17547v1	-	A9765
Staphylococcus aureus A10102	553601	PRJNA39223	39223	Terrabacteria group	Firmicutes	2.82063	32.8	-	ACSO01	45	2939	2817	12/30/09	3/2/17	Contig	Broad Institute	SAMN02595337	GCA_000175495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/495/GCA_000175495.1_ASM17549v1	-	A10102
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.90989	52	-	MXDY01	83	4981	4691	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368049	GCA_002036325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/325/GCA_002036325.1_ASM203632v1	-	N38238
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.05612	50.6	-	LQTM01	201	5338	4841	1/20/16	2/25/17	Contig	JCVI	SAMN03922967	GCA_001520055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/055/GCA_001520055.1_ASM152005v1	-	GN02392
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36594	65.6	-	COQR01	124	4288	4076	3/22/15	3/11/17	Scaffold	SC	SAMEA1403550	GCA_001378475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/475/GCA_001378475.1_7755_3_71	-	0484C
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.081	39.8	-	CKVO01	77	2306	2082	3/21/15	3/4/17	Scaffold	SC	SAMEA1026042	GCA_001120745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/745/GCA_001120745.1_6823_4_18	-	SMRU1938
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21724	39.6	-	CPUS01	96	2456	2204	3/23/15	3/4/17	Scaffold	SC	SAMEA1408271	GCA_001120785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/785/GCA_001120785.1_7444_8_22	-	9801+23240
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36284	65.6	-	COTD01	85	4283	4090	3/23/15	3/11/17	Scaffold	SC	SAMEA1403551	GCA_001378495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/495/GCA_001378495.1_7755_5_63	-	0857H
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.29002	50.7	-	LQUR01	329	5779	5225	1/20/16	2/25/17	Contig	JCVI	SAMN03922947	GCA_001520075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/075/GCA_001520075.1_ASM152007v1	-	GN02612
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.6486	52.1	-	MXDW01	502	4987	4445	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368507	GCA_002036335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/335/GCA_002036335.1_ASM203633v1	-	BCW_2426
Staphylococcus aureus A8117	553574	PRJNA40181	40181	Terrabacteria group	Firmicutes	2.71585	32.7	-	ACYO01	32	2805	2672	12/31/09	3/2/17	Contig	Broad Institute	SAMN02595361	GCA_000175955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/175/955/GCA_000175955.1_ASM17595v1	22492855	A8117
Staphylococcus aureus subsp. aureus MR1	680649	PRJNA40705	40705	Terrabacteria group	Firmicutes	2.80897	32.7	-	ACZQ01	339	2900	2771	10/26/09	3/2/17	Contig	University of Edinburgh	SAMN02471722	GCA_000176195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/195/GCA_000176195.1_ASM17619v1	19884497	MR1
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72648	52.1	-	MXBG01	36	4843	4596	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357147	GCA_002036385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/385/GCA_002036385.1_ASM203638v1	-	BCW_2559
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.0013	50.8	-	LQUT01	303	5463	4899	1/20/16	2/25/17	Contig	JCVI	SAMN03922949	GCA_001520095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/095/GCA_001520095.1_ASM152009v1	-	GN02620
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36719	65.6	-	COUV01	113	4295	4079	3/22/15	3/11/17	Scaffold	SC	SAMEA1403552	GCA_001378515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/515/GCA_001378515.1_7769_7_25	-	1342K
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.11186	39.6	-	CLXT01	66	2322	2063	3/21/15	3/4/17	Scaffold	SC	SAMEA1028987	GCA_001120805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/805/GCA_001120805.1_6983_6_32	-	SMRU2336
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08333	39.7	-	CLWV01	63	2293	2086	3/21/15	3/4/17	Scaffold	SC	SAMEA1028814	GCA_001120825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/825/GCA_001120825.1_6983_5_13	-	SMRU2317
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37046	65.6	-	COVO01	102	4288	4078	3/23/15	3/11/17	Scaffold	SC	SAMEA1403554	GCA_001378535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/535/GCA_001378535.1_7769_7_47	-	1502J
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.07638	50.5	-	LQTC01	117	5225	4866	1/20/16	2/25/17	Contig	JCVI	SAMN03922955	GCA_001520115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/115/GCA_001520115.1_ASM152011v1	-	GN02343
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69673	52.1	-	MXBE01	492	5038	4496	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368127	GCA_002036395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/395/GCA_002036395.1_ASM203639v1	-	SAL3364
Staphylococcus aureus A9754	553590	PRJNA43713	43713	Terrabacteria group	Firmicutes	2.93032	32.6	-	ADJI01	59	3100	2946	4/16/10	3/2/17	Contig	Broad Institute	SAMN02595392	GCA_000177995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/995/GCA_000177995.1_ASM17799v1	-	A9754
Staphylococcus aureus A8796	553577	PRJNA43715	43715	Terrabacteria group	Firmicutes	2.96824	32.8	-	ADJJ01	98	3194	3009	5/28/10	3/2/17	Contig	Broad Institute	SAMN02595393	GCA_000178015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/015/GCA_000178015.1_ASM17801v1	-	A8796
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72771	52.2	-	MXBF01	52	4842	4549	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357148	GCA_002036425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/425/GCA_002036425.1_ASM203642v1	-	BCW_2561
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	4.90343	50.6	-	LQTN01	232	5252	4762	1/20/16	2/25/17	Contig	JCVI	SAMN03922968	GCA_001520135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/135/GCA_001520135.1_ASM152013v1	-	GN02393
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36752	65.6	-	CONE01	114	4300	4080	3/23/15	3/11/17	Scaffold	SC	SAMEA1403555	GCA_001378555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/555/GCA_001378555.1_7156_7_69	-	1029V
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11042	39.7	-	CKNS01	57	2266	1975	3/21/15	3/11/17	Scaffold	SC	SAMEA1023989	GCA_001120985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/985/GCA_001120985.1_6664_1_4	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.15548	39.6	-	CLOX01	46	2423	2174	3/21/15	3/11/17	Scaffold	SC	SAMEA1029156	GCA_001121145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/145/GCA_001121145.1_6949_2_24	-	SMRU2448
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36777	65.6	-	COZK01	138	4316	4106	3/23/15	3/11/17	Scaffold	SC	SAMEA1403556	GCA_001378575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/575/GCA_001378575.1_7841_7_88	-	2069A
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	4.75131	50.9	-	LQVS01	157	4982	4573	1/20/16	2/25/17	Contig	JCVI	SAMN04388551	GCA_001520145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/145/GCA_001520145.1_ASM152014v1	-	GN03253
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7826	52	-	MXBH01	280	5019	4616	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368125	GCA_002036435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/435/GCA_002036435.1_ASM203643v1	-	SAL3360
Staphylococcus aureus A8819	553580	PRJNA43719	43719	Terrabacteria group	Firmicutes	2.91647	32.8	-	ADJK01	48	3091	2933	4/20/10	3/2/17	Contig	Broad Institute	SAMN02595394	GCA_000178035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/035/GCA_000178035.1_ASM17803v1	-	A8819
Staphylococcus aureus subsp. aureus Mu50-omega	585891	PRJDA33445	33445	Terrabacteria group	Firmicutes	2.87843	32.9	-	BABM01	1	3006	2841	1/5/09	3/2/17	Contig	Juntendo University	SAMD00036539	GCA_000180095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/180/095/GCA_000180095.1_ASM18009v1	19124662	Mu50-omega
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72973	52.1	-	MXBI01	35	4847	4591	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357146	GCA_002036455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/455/GCA_002036455.1_ASM203645v1	-	BCW_2557
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.37551	50.6	-	LQVH01	445	5826	5168	1/20/16	2/25/17	Contig	JCVI	SAMN04388540	GCA_001520175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/175/GCA_001520175.1_ASM152017v1	-	GN02769
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36213	65.6	-	COXQ01	113	4296	4071	3/23/15	3/11/17	Scaffold	SC	SAMEA1403557	GCA_001378595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/595/GCA_001378595.1_7841_6_23	-	1831R
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.19676	39.6	-	CKGX01	72	2429	2166	3/21/15	3/11/17	Scaffold	SC	SAMEA1023973	GCA_001121205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/205/GCA_001121205.1_6631_1_24	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.0445	39.6	-	CQZW01	30	2268	2033	3/22/15	3/11/17	Scaffold	SC	SAMEA1024593	GCA_001121305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/305/GCA_001121305.1_6730_6_13	-	SMRU685
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36531	65.6	-	COUU01	92	4274	4087	3/23/15	3/11/17	Scaffold	SC	SAMEA1403559	GCA_001378615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/615/GCA_001378615.1_7769_7_23	-	1334B
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.11041	50.6	-	LQUU01	250	5519	4994	1/20/16	2/25/17	Contig	JCVI	SAMN04388525	GCA_001520195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/195/GCA_001520195.1_ASM152019v1	-	GN02627
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72864	52.1	-	MXBJ01	33	4839	4586	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357145	GCA_002036465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/465/GCA_002036465.1_ASM203646v1	-	BCW_2556
Staphylococcus aureus O11	948561	PRJNA62079	62079	Terrabacteria group	Firmicutes	2.77035	32.7	-	AEUQ01	87	2876	2685	2/15/11	3/2/17	Contig	Geneva University Hospitals	SAMN02469935	GCA_000189435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/435/GCA_000189435.2_ASM18943v2	21398544	O11
Staphylococcus aureus O46	948563	PRJNA62081	62081	Terrabacteria group	Firmicutes	2.81126	32.8	-	AEUR01	96	2912	2733	2/15/11	3/2/17	Contig	Geneva University Hospitals	SAMN02469934	GCA_000189455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/189/455/GCA_000189455.2_ASM18945v2	21398544	O46
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72915	52.1	-	MXBK01	33	4840	4592	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357144	GCA_002036505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/505/GCA_002036505.1_ASM203650v1	-	BCW_2553
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.04082	50.6	-	LQUG01	254	5356	4859	1/20/16	2/25/17	Contig	JCVI	SAMN03922991	GCA_001520215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/215/GCA_001520215.1_ASM152021v1	-	GN02529
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36254	65.6	-	COQT01	122	4296	4075	3/22/15	3/11/17	Scaffold	SC	SAMEA1403560	GCA_001378635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/635/GCA_001378635.1_7755_3_70	-	0482A
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11679	39.5	-	CKZP01	60	2324	2106	3/21/15	3/11/17	Scaffold	SC	SAMEA1026159	GCA_001121465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/465/GCA_001121465.1_6840_1_5	-	SMRU1757
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12056	39.6	-	CLFJ01	66	2330	2096	3/21/15	3/11/17	Scaffold	SC	SAMEA1025783	GCA_001121485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/485/GCA_001121485.1_6925_3_1	-	SMRU2113
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36903	65.6	-	COVM01	105	4296	4094	3/22/15	3/11/17	Scaffold	SC	SAMEA1403561	GCA_001378655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/655/GCA_001378655.1_7769_7_45	-	type strain: 1465
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.21339	50.6	-	LQUF01	417	5659	4985	1/20/16	2/25/17	Contig	JCVI	SAMN03922990	GCA_001520235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/235/GCA_001520235.1_ASM152023v1	-	GN02514
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.63559	52.1	-	MXBM01	19	4718	4474	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357142	GCA_002036525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/525/GCA_002036525.1_ASM203652v1	-	BCW_2550
Staphylococcus aureus subsp. aureus CGS00	543538	PRJNA30107	30107	Terrabacteria group	Firmicutes	2.78153	32.7	-	ABWS01	18	2891	2673	12/17/10	3/2/17	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393771	GCA_000193835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/835/GCA_000193835.2_ASM19383v2	-	CGS00
Staphylococcus aureus subsp. aureus CGS01	543539	PRJNA30103	30103	Terrabacteria group	Firmicutes	2.85798	32.6	-	ABWT01	58	2991	2878	12/17/10	3/2/17	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393769	GCA_000193855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/855/GCA_000193855.2_ASM19385v2	-	CGS01
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.68087	52.1	-	MXBN01	30	4789	4531	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357141	GCA_002036535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/535/GCA_002036535.1_ASM203653v1	-	BCW_2549
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.26718	50.7	-	LQVZ01	275	5642	5148	1/20/16	2/25/17	Contig	JCVI	SAMN04388558	GCA_001520255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/255/GCA_001520255.1_ASM152025v1	-	GN03578
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37037	65.6	-	COTF01	122	4305	4089	3/23/15	3/11/17	Scaffold	SC	SAMEA1403562	GCA_001378675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/675/GCA_001378675.1_7755_5_64	-	type strain: 0867
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.00981	39.8	-	CKAN01	449	2172	1921	3/21/15	3/11/17	Scaffold	SC	SAMEA974703	GCA_001121565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/565/GCA_001121565.1_6259_6_22	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10527	39.6	-	CLWJ01	51	2332	2095	3/21/15	3/11/17	Scaffold	SC	SAMEA1025764	GCA_001121585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/585/GCA_001121585.1_6983_4_96	-	SMRU2304
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36615	65.6	-	COVN01	114	4282	4079	3/23/15	3/11/17	Scaffold	SC	SAMEA1403563	GCA_001378695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/695/GCA_001378695.1_7769_7_46	-	1477G
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.18241	50.7	-	LQTG01	261	5512	4998	1/20/16	2/25/17	Contig	JCVI	SAMN03922959	GCA_001520275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/275/GCA_001520275.1_ASM152027v1	-	GN02359
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.65372	52.1	-	MXBO01	44	4752	4503	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357140	GCA_002036565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/565/GCA_002036565.1_ASM203656v1	-	BCW_2544
Staphylococcus aureus subsp. aureus CGS03	543540	PRJNA30105	30105	Terrabacteria group	Firmicutes	2.83035	32.8	-	ABWY01	68	2967	2830	12/16/10	3/2/17	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393770	GCA_000193875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/193/875/GCA_000193875.2_ASM19387v2	-	CGS03
Staphylococcus aureus subsp. aureus 21189	904725	PRJNA53603	53603	Terrabacteria group	Firmicutes	2.7826	32.7	-	AFEE01	61	2948	2828	4/20/11	3/2/17	Contig	J. Craig Venter Institute	SAMN02436549	GCA_000205345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/205/345/GCA_000205345.2_ASM20534v2	-	21189
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.93923	52.2	-	MXBP01	79	5120	4861	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357139	GCA_002036585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/585/GCA_002036585.1_ASM203658v1	-	BCW_2541
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.12397	50.7	-	LQTH01	308	5568	4987	1/20/16	2/25/17	Contig	JCVI	SAMN03922961	GCA_001520295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/295/GCA_001520295.1_ASM152029v1	-	GN02363
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38427	65.6	-	COUT01	100	4301	4092	3/23/15	3/11/17	Scaffold	SC	SAMEA1403564	GCA_001378715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/715/GCA_001378715.1_7769_7_24	-	1336D
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10527	39.7	-	CLFA01	71	2262	1976	3/21/15	3/11/17	Scaffold	SC	SAMEA1025986	GCA_001121625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/625/GCA_001121625.1_6899_7_10	-	SMRU2098
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.17484	39.5	-	CMFP01	62	2425	2178	3/21/15	3/11/17	Scaffold	SC	SAMEA1028909	GCA_001121645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/645/GCA_001121645.1_7011_6_19	-	SMRU2827
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36095	65.6	-	COWZ01	102	4281	4092	3/23/15	3/11/17	Scaffold	SC	SAMEA1403565	GCA_001378735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/735/GCA_001378735.1_7769_8_90	-	1744X
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.02399	50.4	-	LQTO01	240	5301	4796	1/20/16	2/25/17	Contig	JCVI	SAMN03922969	GCA_001520315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/315/GCA_001520315.1_ASM152031v1	-	GN02404
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69713	52.1	-	MXBL01	38	4816	4564	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357143	GCA_002036595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/595/GCA_002036595.1_ASM203659v1	-	BCW_2551
Staphylococcus aureus subsp. aureus 21172	904723	PRJNA53599	53599	Terrabacteria group	Firmicutes	2.69047	32.7	-	AFEF01	31	2761	2645	4/20/11	3/2/17	Contig	J. Craig Venter Institute	SAMN02436469	GCA_000205365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/205/365/GCA_000205365.2_ASM20536v2	-	21172
Staphylococcus aureus subsp. aureus 21193	904726	PRJNA53605	53605	Terrabacteria group	Firmicutes	2.73535	32.7	-	AFEG01	28	2841	2630	4/20/11	3/2/17	Contig	J. Craig Venter Institute	SAMN02436550	GCA_000205385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/205/385/GCA_000205385.2_ASM20538v2	-	21193
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.94384	52.2	-	MXBR01	98	5102	4859	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357137	GCA_002036605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/605/GCA_002036605.1_ASM203660v1	-	BCW_2539
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.33613	50.5	-	LQUC01	260	5684	5193	1/20/16	2/25/17	Contig	JCVI	SAMN03922986	GCA_001520335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/335/GCA_001520335.1_ASM152033v1	-	GN02484
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36513	65.6	-	COTA01	105	4292	4070	3/23/15	3/11/17	Scaffold	SC	SAMEA1403566	GCA_001378755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/755/GCA_001378755.1_7755_5_60	-	0826Z
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.05151	39.7	-	CRIB01	63	2266	2033	3/23/15	3/11/17	Scaffold	SC	SAMEA1025399	GCA_001121685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/685/GCA_001121685.1_6736_8_22	-	SMRU1318
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.23726	39.4	-	CKFI01	146	2488	2211	3/21/15	3/11/17	Scaffold	SC	SAMEA1023851	GCA_001121705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/705/GCA_001121705.1_6630_3_7	-	6B
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36646	65.6	-	COQQ01	118	4294	4075	3/22/15	3/11/17	Scaffold	SC	SAMEA1403567	GCA_001378775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/775/GCA_001378775.1_7755_3_69	-	0458Z
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.27069	50.8	-	LQUE01	373	5774	5178	1/20/16	2/25/17	Contig	JCVI	SAMN03922989	GCA_001520355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/355/GCA_001520355.1_ASM152035v1	-	GN02501
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.99583	52.2	-	MXBQ01	99	5178	4914	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357138	GCA_002036645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/645/GCA_002036645.1_ASM203664v1	-	BCW_2540
Staphylococcus aureus 16K	908247	PRJDA53963	53963	Terrabacteria group	Firmicutes	2.83314	32.7	-	BABZ01	107	2966	2815	1/12/11	3/2/17	Contig	"Division of Bacteriology, Department of Infectious Disease Control and International Medicine, Niigata University Graduate School of Medical and Dental Sciences"	SAMD00036546	GCA_000208695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/208/695/GCA_000208695.1_ASM20869v1	-	16K
Staphylococcus aureus subsp. aureus RN4220	561307	PRJNA66527	66527	Terrabacteria group	Firmicutes	2.66339	32.7	-	AFGU01	118	2744	2644	5/5/11	3/2/17	Contig	Dartmouth Medical School	SAMN02469730	GCA_000212435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/212/435/GCA_000212435.2_ASM21243v2	21378186	RN4220
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83065	52.2	-	MXBT01	641	5204	4623	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368114	GCA_002036665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/665/GCA_002036665.1_ASM203666v1	-	SAL3338
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.21032	50.8	-	LQTZ01	143	5450	5117	1/20/16	2/25/17	Contig	JCVI	SAMN03922982	GCA_001520375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/375/GCA_001520375.1_ASM152037v1	-	GN02460
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37361	65.6	-	COVL01	112	4298	4091	3/23/15	3/11/17	Scaffold	SC	SAMEA1403568	GCA_001378795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/795/GCA_001378795.1_7769_7_44	-	1457K
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08903	39.5	-	CLIG01	69	2296	2064	3/21/15	3/11/17	Scaffold	SC	SAMEA1025838	GCA_001121725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/725/GCA_001121725.1_6925_6_20	-	SMRU2204
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.32251	39.5	-	CMJT01	61	2483	2163	3/23/15	3/11/17	Scaffold	SC	SAMEA1026134	GCA_001121785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/785/GCA_001121785.1_7038_8_40	-	SMRU2248
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36167	65.6	-	COUX01	109	4278	4084	3/22/15	3/11/17	Scaffold	SC	SAMEA1403569	GCA_001378815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/815/GCA_001378815.1_7769_7_27	-	1358C
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.20871	50.7	-	LQTY01	222	5577	5106	1/20/16	2/25/17	Contig	JCVI	SAMN03922980	GCA_001520395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/395/GCA_001520395.1_ASM152039v1	-	GN02449
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.74639	52.2	-	MXBU01	67	4827	4598	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357135	GCA_002036675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/675/GCA_002036675.1_ASM203667v1	-	BCW_2534
Staphylococcus aureus subsp. aureus 21305	904759	PRJNA53671	53671	Terrabacteria group	Firmicutes	2.80072	32.6	-	AFNO01	38	2954	2752	5/27/11	3/2/17	Contig	J. Craig Venter Institute	SAMN00116885	GCA_000215405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/405/GCA_000215405.2_ASM21540v2	-	21305
Staphylococcus aureus subsp. aureus 21310	904760	PRJNA53673	53673	Terrabacteria group	Firmicutes	2.76601	32.7	-	AFNP01	70	2896	2733	5/27/11	3/2/17	Contig	J. Craig Venter Institute	SAMN00116888	GCA_000215425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/425/GCA_000215425.2_ASM21542v2	-	21310
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.8993	52.2	-	MXBS01	90	5085	4825	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357136	GCA_002036705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/705/GCA_002036705.1_ASM203670v1	-	BCW_2538
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.1727	50.7	-	LQTV01	236	5591	5072	1/20/16	2/25/17	Contig	JCVI	SAMN03922977	GCA_001520405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/405/GCA_001520405.1_ASM152040v1	-	GN02441
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.40193	65.6	-	COND01	102	4316	4113	3/23/15	3/11/17	Scaffold	SC	SAMEA1403570	GCA_001378835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/835/GCA_001378835.1_7156_7_66	-	1012B
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.03755	39.6	-	CLJL01	55	2228	1981	3/21/15	3/11/17	Scaffold	SC	SAMEA1028753	GCA_001121885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/885/GCA_001121885.1_6925_8_11	-	SMRU2531
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.06948	39.7	-	CKGK01	65	2253	2011	3/21/15	3/6/17	Scaffold	SC	SAMEA1023940	GCA_001121965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/965/GCA_001121965.1_6631_1_13	-	22A
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36829	65.6	-	COXC01	109	4290	4076	3/23/15	3/11/17	Scaffold	SC	SAMEA1403571	GCA_001378855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/855/GCA_001378855.1_7769_8_91	-	1755J
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.30042	50.7	-	LQTU01	231	5613	5145	1/20/16	2/25/17	Contig	JCVI	SAMN03922976	GCA_001520435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/435/GCA_001520435.1_ASM152043v1	-	GN02430
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.889	52.1	-	MXBV01	78	5015	4767	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357134	GCA_002036715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/715/GCA_002036715.1_ASM203671v1	-	BCW_2531
Staphylococcus aureus subsp. aureus 21235	904738	PRJNA53629	53629	Terrabacteria group	Firmicutes	2.79742	32.8	-	AFTQ01	79	2964	2710	7/27/11	3/2/17	Contig	J. Craig Venter Institute	SAMN00116863	GCA_000221725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/725/GCA_000221725.2_ASM22172v2	-	21235
Staphylococcus aureus subsp. aureus 21269	904749	PRJNA53651	53651	Terrabacteria group	Firmicutes	2.81052	32.7	-	AFTU01	58	2915	2670	7/27/11	8/8/17	Contig	J. Craig Venter Institute	SAMN00116894	GCA_000221745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/745/GCA_000221745.2_ASM22174v2	-	21269
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.15249	52.2	-	MXBW01	66	5358	5100	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357133	GCA_002036745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/745/GCA_002036745.1_ASM203674v1	-	BCW_2530
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	4.94755	50.6	-	LQTT01	93	5128	4844	1/20/16	2/25/17	Contig	JCVI	SAMN03922975	GCA_001520455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/455/GCA_001520455.1_ASM152045v1	-	GN02427
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35943	65.6	-	COQP01	112	4290	4087	3/23/15	3/11/17	Scaffold	SC	SAMEA1403573	GCA_001378875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/875/GCA_001378875.1_7755_3_68	-	0435Z
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.06341	39.6	-	CKLC01	42	2240	1979	3/21/15	3/9/17	Scaffold	SC	SAMEA1023796	GCA_001122045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/045/GCA_001122045.1_6641_6_15	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14372	39.5	-	CKAR01	135	2370	2149	3/21/15	3/4/17	Scaffold	SC	SAMEA974669	GCA_001122065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/065/GCA_001122065.1_6259_6_8	-	6A
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3637	65.6	-	COTB01	130	4298	4091	3/23/15	3/11/17	Scaffold	SC	SAMEA1403574	GCA_001378895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/895/GCA_001378895.1_7755_5_61	-	0829C
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.22125	50.9	-	LQVO01	361	5663	5072	1/20/16	2/25/17	Contig	JCVI	SAMN04388547	GCA_001520475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/475/GCA_001520475.1_ASM152047v1	-	GN03135
Salmonella enterica subsp. enterica serovar Copenhagen	486990	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.84781	52.1	-	MXBX01	161	5003	4717	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368107	GCA_002036765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/765/GCA_002036765.1_ASM203676v1	-	SAL3328
Staphylococcus aureus subsp. aureus 21266	904747	PRJNA53647	53647	Terrabacteria group	Firmicutes	2.71213	32.7	-	AFTT01	27	2833	2605	7/27/11	3/2/17	Contig	J. Craig Venter Institute	SAMN00116895	GCA_000221765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/765/GCA_000221765.2_ASM22176v2	-	21266
Staphylococcus aureus subsp. aureus 21201	904731	PRJNA53615	53615	Terrabacteria group	Firmicutes	2.74803	32.7	-	AFTO01	46	2851	2671	7/27/11	3/2/17	Contig	J. Craig Venter Institute	SAMN00116864	GCA_000221805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/805/GCA_000221805.2_ASM22180v2	-	21201
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.07398	52.2	-	MXBY01	103	5278	5016	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357132	GCA_002036785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/785/GCA_002036785.1_ASM203678v1	-	BCW_2524
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.08084	50.7	-	LQTS01	227	5327	4871	1/20/16	2/25/17	Contig	JCVI	SAMN03922974	GCA_001520495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/495/GCA_001520495.1_ASM152049v1	-	GN02426
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3677	65.6	-	COZH01	114	4291	4079	3/22/15	3/11/17	Scaffold	SC	SAMEA1403575	GCA_001378915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/915/GCA_001378915.1_7841_7_87	-	2052G
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08154	39.5	-	CKVS01	56	2280	2046	3/21/15	3/4/17	Scaffold	SC	SAMEA1025709	GCA_001122205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/205/GCA_001122205.1_6823_4_22	-	SMRU1942
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11578	39.7	-	CKHT01	52	2270	1978	3/21/15	3/6/17	Scaffold	SC	SAMEA1023747	GCA_001122305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/305/GCA_001122305.1_6631_2_8	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.40196	65.6	-	COVK01	100	4311	4122	3/23/15	3/11/17	Scaffold	SC	SAMEA1403576	GCA_001378935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/935/GCA_001378935.1_7769_7_43	-	1455H
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.09521	50.8	-	LQTR01	228	5485	4979	1/20/16	2/25/17	Contig	JCVI	SAMN03922973	GCA_001520515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/515/GCA_001520515.1_ASM152051v1	-	GN02422
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83856	52.1	-	MXBZ01	99	4979	4739	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357131	GCA_002036795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/795/GCA_002036795.1_ASM203679v1	-	BCW_2523
Staphylococcus aureus subsp. aureus 21200	904730	PRJNA53613	53613	Terrabacteria group	Firmicutes	2.67435	32.7	-	AFTN01	29	2736	2576	7/27/11	3/2/17	Contig	J. Craig Venter Institute	SAMN02436338	GCA_000221825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/825/GCA_000221825.2_ASM22182v2	-	21200
Staphylococcus aureus subsp. aureus 21195	904728	PRJNA53609	53609	Terrabacteria group	Firmicutes	2.81924	32.8	-	AFTM01	54	2948	2772	7/27/11	3/2/17	Contig	J. Craig Venter Institute	SAMN02436337	GCA_000221845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/845/GCA_000221845.2_ASM22184v2	-	21195
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.86294	52.2	-	MXCA01	96	4980	4739	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357130	GCA_002036815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/815/GCA_002036815.1_ASM203681v1	-	BCW_2518
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.19016	50.8	-	LQUD01	428	5643	5045	1/20/16	2/25/17	Contig	JCVI	SAMN03922988	GCA_001520535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/535/GCA_001520535.1_ASM152053v1	-	GN02500
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38088	65.6	-	COMB01	93	4288	4102	3/23/15	3/11/17	Scaffold	SC	SAMEA1403577	GCA_001378955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/955/GCA_001378955.1_7156_6_41	-	type strain: 0016
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.05548	39.5	-	CKTH01	76	2262	2031	3/21/15	3/4/17	Scaffold	SC	SAMEA1025528	GCA_001122425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/425/GCA_001122425.1_6807_3_16	-	SMRU1624
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.08519	39.6	-	CKLG01	53	2310	2075	3/21/15	3/4/17	Scaffold	SC	SAMEA1023700	GCA_001122485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/485/GCA_001122485.1_6641_6_2	-	28F
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36497	65.6	-	COTC01	121	4295	4083	3/22/15	3/11/17	Scaffold	SC	SAMEA1403578	GCA_001378975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/975/GCA_001378975.1_7755_5_62	-	0837L
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.16908	50.4	-	LQUP01	310	5524	4963	1/20/16	2/25/17	Contig	JCVI	SAMN03923000	GCA_001520555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/555/GCA_001520555.1_ASM152055v1	-	GN02590
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.98977	52.1	-	MXCB01	113	5173	4890	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357129	GCA_002036845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/845/GCA_002036845.1_ASM203684v1	-	BCW_2517
Staphylococcus aureus subsp. aureus 21194	904727	PRJNA53607	53607	Terrabacteria group	Firmicutes	2.70805	32.7	-	AGTU01	229	2893	2589	12/22/11	3/2/17	Contig	J. Craig Venter Institute	SAMN02436511	GCA_000239535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/535/GCA_000239535.2_ASM23953v2	-	21194
Staphylococcus aureus subsp. aureus 21331	904766	PRJNA53685	53685	Terrabacteria group	Firmicutes	2.66532	32.8	-	AGTV01	40	2746	2598	12/22/11	3/2/17	Contig	J. Craig Venter Institute	SAMN00116844	GCA_000239555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/555/GCA_000239555.2_ASM23955v2	-	21331
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.93336	52.1	-	MXCC01	93	5102	4844	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357128	GCA_002036865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/865/GCA_002036865.1_ASM203686v1	-	BCW_2516
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.18875	50.6	-	LQVA01	313	5552	4983	1/20/16	2/25/17	Contig	JCVI	SAMN04388531	GCA_001520575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/575/GCA_001520575.1_ASM152057v1	-	GN02674
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36627	65.6	-	COXD01	123	4298	4075	3/23/15	3/11/17	Scaffold	SC	SAMEA1403579	GCA_001378995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/378/995/GCA_001378995.1_7769_8_92	-	1757L
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.04275	39.7	-	CRPD01	45	2248	2032	3/22/15	3/11/17	Scaffold	SC	SAMEA1025496	GCA_001122545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/545/GCA_001122545.1_6755_6_7	-	SMRU1183
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.16072	39.6	-	CKNV01	55	2348	2126	3/21/15	3/11/17	Scaffold	SC	SAMEA1023809	GCA_001122565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/565/GCA_001122565.1_6664_1_8	-	6B
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35931	65.6	-	COZG01	107	4289	4085	3/22/15	3/11/17	Scaffold	SC	SAMEA1403581	GCA_001379015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/015/GCA_001379015.1_7841_7_86	-	2051F
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.27395	50.6	-	LQVB01	341	5761	5111	1/20/16	2/25/17	Contig	JCVI	SAMN04388532	GCA_001520595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/595/GCA_001520595.1_ASM152059v1	-	GN02681
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.97011	52.1	-	MXCE01	97	5147	4868	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357126	GCA_002036885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/885/GCA_002036885.1_ASM203688v1	-	BCW_2514
Staphylococcus aureus subsp. aureus 21334	904768	PRJNA53689	53689	Terrabacteria group	Firmicutes	2.77366	32.7	-	AGTW01	44	2919	2769	12/22/11	3/2/17	Contig	J. Craig Venter Institute	SAMN00116845	GCA_000239575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/575/GCA_000239575.2_ASM23957v2	-	21334
Staphylococcus aureus subsp. aureus 21340	904771	PRJNA53695	53695	Terrabacteria group	Firmicutes	2.80386	32.7	-	AGTX01	48	2968	2821	12/22/11	3/2/17	Contig	J. Craig Venter Institute	SAMN00116872	GCA_000239595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/595/GCA_000239595.2_ASM23959v2	-	21340
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.07676	52.1	-	MXCD01	89	5254	4992	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357127	GCA_002036895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/895/GCA_002036895.1_ASM203689v1	-	BCW_2515
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.08627	50.8	-	LQVW01	236	5446	4955	1/20/16	2/25/17	Contig	JCVI	SAMN04388555	GCA_001520615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/615/GCA_001520615.1_ASM152061v1	-	GN03415
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37245	65.6	-	COMG01	82	4272	4079	3/23/15	3/11/17	Scaffold	SC	SAMEA1403584	GCA_001379035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/035/GCA_001379035.1_7156_6_42	-	0018W
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.22267	39.8	-	CLDZ01	79	2406	2191	3/21/15	3/11/17	Scaffold	SC	SAMEA1025896	GCA_001122645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/645/GCA_001122645.1_6899_5_5	-	SMRU2045
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.07458	39.8	-	CLGU01	74	2266	2015	3/21/15	3/11/17	Scaffold	SC	SAMEA1026191	GCA_001122725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/725/GCA_001122725.1_6925_4_5	-	SMRU2141
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36358	65.6	-	COUR01	113	4293	4077	3/22/15	3/11/17	Scaffold	SC	SAMEA1403585	GCA_001379055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/055/GCA_001379055.1_7769_7_20	-	1271H
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.2149	50.8	-	LQUY01	315	5621	5083	1/20/16	2/25/17	Contig	JCVI	SAMN04388529	GCA_001520635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/635/GCA_001520635.1_ASM152063v1	-	GN02657
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.97291	52.1	-	MXCF01	93	5150	4879	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357125	GCA_002036905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/905/GCA_002036905.1_ASM203690v1	-	BCW_2513
Staphylococcus aureus subsp. aureus 21232	904737	PRJNA53627	53627	Terrabacteria group	Firmicutes	2.75853	32.6	-	AGTY01	53	2873	2761	12/22/11	3/2/17	Contig	J. Craig Venter Institute	SAMN00116881	GCA_000239615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/615/GCA_000239615.2_ASM23961v2	-	21232
Staphylococcus aureus subsp. aureus 21178	904724	PRJNA53601	53601	Terrabacteria group	Firmicutes	2.97559	32.7	-	AGRN01	109	3135	2995	12/21/11	3/2/17	Contig	J. Craig Venter Institute	SAMN02436364	GCA_000239635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/635/GCA_000239635.2_ASM23963v2	-	21178
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.8951	51.9	-	MXCG01	72	4988	4738	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357124	GCA_002036945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/945/GCA_002036945.1_ASM203694v1	-	BCW_2512
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.08226	50.7	-	LQVI01	259	5466	4945	1/20/16	2/25/17	Contig	JCVI	SAMN04388541	GCA_001520655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/655/GCA_001520655.1_ASM152065v1	-	GN02779
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36526	65.6	-	COMZ01	101	4276	4087	3/22/15	3/11/17	Scaffold	SC	SAMEA1403586	GCA_001379075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/075/GCA_001379075.1_7156_7_64	-	0992E
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.0713	39.6	-	CLKW01	67	2263	2051	3/21/15	3/11/17	Scaffold	SC	SAMEA1029410	GCA_001122745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/745/GCA_001122745.1_6938_3_30	-	SMRU3155
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07221	39.6	-	CKHC01	40	2262	2016	3/21/15	3/11/17	Scaffold	SC	SAMEA1023786	GCA_001122785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/785/GCA_001122785.1_6631_2_10	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36871	65.6	-	COTV01	99	4292	4097	3/23/15	3/11/17	Scaffold	SC	SAMEA1403589	GCA_001379095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/095/GCA_001379095.1_7755_5_87	-	0996J
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.37109	50.8	-	LQUK01	448	5897	5271	1/20/16	2/25/17	Contig	JCVI	SAMN03922995	GCA_001520675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/675/GCA_001520675.1_ASM152067v1	-	GN02546
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.77521	52.1	-	MXCI01	51	4880	4636	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357122	GCA_002036965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/965/GCA_002036965.1_ASM203696v1	-	BCW_2507
Staphylococcus aureus subsp. aureus 21202	904732	PRJNA53617	53617	Terrabacteria group	Firmicutes	2.77581	32.7	-	AGRO01	78	2895	2705	12/21/11	3/2/17	Contig	J. Craig Venter Institute	SAMN00116869	GCA_000239655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/655/GCA_000239655.2_ASM23965v2	-	21202
Staphylococcus aureus subsp. aureus 21209	904735	PRJNA53623	53623	Terrabacteria group	Firmicutes	2.88531	32.6	-	AGRP01	95	3074	2930	12/21/11	3/2/17	Contig	J. Craig Venter Institute	SAMN00116848	GCA_000239675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/239/675/GCA_000239675.2_ASM23967v2	-	21209
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7602	52.2	-	MXCH01	84	4859	4628	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357123	GCA_002036985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/985/GCA_002036985.1_ASM203698v1	-	BCW_2511
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.22678	50.7	-	LQUJ01	160	5570	5139	1/20/16	2/25/17	Contig	JCVI	SAMN03922994	GCA_001520695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/695/GCA_001520695.1_ASM152069v1	-	GN02545
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3675	65.6	-	CONA01	109	4295	4084	3/22/15	3/11/17	Scaffold	SC	SAMEA1403590	GCA_001379115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/115/GCA_001379115.1_7156_7_65	-	1002Q
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14208	39.6	-	CKIN01	83	2351	2114	3/21/15	3/11/17	Scaffold	SC	SAMEA1023961	GCA_001122825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/825/GCA_001122825.1_6631_4_11	-	9V
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12672	39.6	-	CLIK01	51	2368	2130	3/21/15	3/11/17	Scaffold	SC	SAMEA1026089	GCA_001122865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/865/GCA_001122865.1_6925_6_5	-	SMRU2189
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37381	65.6	-	COMJ01	105	4293	4077	3/23/15	3/11/17	Scaffold	SC	SAMEA1403591	GCA_001379135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/135/GCA_001379135.1_7156_6_43	-	0020Y
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.1117	50.5	-	LQVY01	217	5432	4927	1/20/16	2/25/17	Contig	JCVI	SAMN04388557	GCA_001520715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/715/GCA_001520715.1_ASM152071v1	-	GN03545
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.63219	52.1	-	MXCJ01	58	4694	4452	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357121	GCA_002036995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/036/995/GCA_002036995.1_ASM203699v1	-	BCW_2506
Staphylococcus aureus subsp. aureus 21252	904743	PRJNA53639	53639	Terrabacteria group	Firmicutes	2.77717	32.8	-	AHJV01	57	2882	2722	1/12/12	3/2/17	Contig	J. Craig Venter Institute	SAMN00116884	GCA_000242475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/475/GCA_000242475.2_ASM24247v2	-	21252
Staphylococcus aureus subsp. aureus 21262	904745	PRJNA53643	53643	Terrabacteria group	Firmicutes	2.7835	32.7	-	AHJW01	66	2918	2744	1/12/12	3/2/17	Contig	J. Craig Venter Institute	SAMN00116870	GCA_000242495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/495/GCA_000242495.2_ASM24249v2	-	21262
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.55011	52.2	-	MXCK01	28	4578	4364	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357120	GCA_002037025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/025/GCA_002037025.1_ASM203702v1	-	BCW_2505
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.10404	50.6	-	LQVX01	255	5467	4950	1/20/16	2/25/17	Contig	JCVI	SAMN04388556	GCA_001520735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/735/GCA_001520735.1_ASM152073v1	-	GN03496
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39512	65.6	-	COYS01	171	4329	4091	3/22/15	3/11/17	Scaffold	SC	SAMEA1403592	GCA_001379155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/155/GCA_001379155.1_7841_7_62	-	1945Q
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.14055	39.6	-	CLLW01	65	2359	2134	3/21/15	3/11/17	Scaffold	SC	SAMEA1029129	GCA_001122885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/885/GCA_001122885.1_6938_6_21	-	SMRU2685
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.22404	39.6	-	CPUW01	77	2466	2193	3/23/15	3/11/17	Scaffold	SC	SAMEA1020844	GCA_001122925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/925/GCA_001122925.1_6732_1_13	-	SN26575
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38179	65.6	-	COOZ01	84	4301	4104	3/23/15	3/11/17	Scaffold	SC	SAMEA1403594	GCA_001379195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/195/GCA_001379195.1_7755_2_21	-	0197Q
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.16083	50.9	-	LQUZ01	338	5639	5072	1/20/16	2/25/17	Contig	JCVI	SAMN04388530	GCA_001520755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/755/GCA_001520755.1_ASM152075v1	-	GN02669
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.65349	52.1	-	MXCL01	32	4707	4483	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357119	GCA_002037035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/035/GCA_002037035.1_ASM203703v1	-	BCW_2503
Staphylococcus aureus subsp. aureus 21264	904746	PRJNA53645	53645	Terrabacteria group	Firmicutes	2.84356	32.7	-	AHJX01	56	2991	2820	1/12/12	3/2/17	Contig	J. Craig Venter Institute	SAMN00116893	GCA_000242515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/515/GCA_000242515.2_ASM24251v2	-	21264
Staphylococcus aureus subsp. aureus 21272	904750	PRJNA53653	53653	Terrabacteria group	Firmicutes	2.75588	32.7	-	AHJY01	35	2837	2729	1/12/12	3/2/17	Contig	J. Craig Venter Institute	SAMN00116882	GCA_000242535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/535/GCA_000242535.2_ASM24253v2	-	21272
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69358	52.2	-	MXCM01	48	4766	4547	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357118	GCA_002037065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/065/GCA_002037065.1_ASM203706v1	-	BCW_2499
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.16597	50.6	-	LQVV01	181	5477	5080	1/20/16	2/25/17	Contig	JCVI	SAMN04388554	GCA_001520775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/775/GCA_001520775.1_ASM152077v1	-	GN03409
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36653	65.6	-	COUP01	115	4280	4078	3/22/15	3/11/17	Scaffold	SC	SAMEA1403596	GCA_001379235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/235/GCA_001379235.1_7769_7_22	-	1309Z
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.19092	39.7	-	CPUG01	170	2408	2143	3/23/15	3/11/17	Scaffold	SC	SAMEA682584	GCA_001122945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/945/GCA_001122945.1_5390_1_10	-	spnIC104
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.13924	39.8	-	CKVC01	65	2335	2116	3/21/15	3/11/17	Scaffold	SC	SAMEA1026211	GCA_001123005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/005/GCA_001123005.1_6823_3_22	-	SMRU1918
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3741	65.6	-	COML01	82	4277	4086	3/23/15	3/11/17	Scaffold	SC	SAMEA1403597	GCA_001379255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/255/GCA_001379255.1_7156_6_44	-	0024C
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.15006	50.8	-	LQVF01	222	5546	5081	1/20/16	2/25/17	Contig	JCVI	SAMN04388538	GCA_001520795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/795/GCA_001520795.1_ASM152079v1	-	GN02758
Salmonella enterica subsp. enterica serovar Montevideo	115981	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.57574	52.3	-	MXCN01	50	4651	4424	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368090	GCA_002037075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/075/GCA_002037075.1_ASM203707v1	-	CFSAN005876
Staphylococcus aureus subsp. aureus 21283	904754	PRJNA53661	53661	Terrabacteria group	Firmicutes	2.82325	32.7	-	AHJZ01	120	2991	2872	1/12/12	3/2/17	Contig	J. Craig Venter Institute	SAMN00117448	GCA_000242555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/555/GCA_000242555.2_ASM24255v2	-	21283
Staphylococcus aureus subsp. aureus 21333	904767	PRJNA53687	53687	Terrabacteria group	Firmicutes	2.79115	32.7	-	AHKA01	50	2875	2734	1/12/12	3/2/17	Contig	J. Craig Venter Institute	SAMN00116858	GCA_000242575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/242/575/GCA_000242575.2_ASM24257v2	-	21333
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.76801	52	-	MXCQ01	82	4809	4530	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357115	GCA_002037105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/105/GCA_002037105.1_ASM203710v1	-	BCW_2486
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.27548	50.5	-	LQVG01	216	5607	5124	1/20/16	2/25/17	Contig	JCVI	SAMN04388539	GCA_001520815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/815/GCA_001520815.1_ASM152081v1	-	GN02766
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3896	65.6	-	CHIX01	159	4310	4098	4/21/15	3/11/17	Scaffold	SC	SAMEA1403598	GCA_001379275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/275/GCA_001379275.1_7841_7_63	-	1955B
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10547	39.6	-	CKYR01	45	2311	2060	3/21/15	3/11/17	Scaffold	SC	SAMEA1025623	GCA_001123085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/085/GCA_001123085.1_6830_3_21	-	SMRU1653
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.08826	39.9	-	CMUN01	208	2227	1981	3/22/15	3/11/17	Scaffold	SC	SAMEA1022895	GCA_001123105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/105/GCA_001123105.1_5737_7_5	-	164
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37058	65.6	-	COTT01	131	4302	4089	3/23/15	3/11/17	Scaffold	SC	SAMEA1403599	GCA_001379295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/295/GCA_001379295.1_7755_5_86	-	0995H
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.10529	50.7	-	LQVE01	287	5393	4864	1/20/16	2/25/17	Contig	JCVI	SAMN04388535	GCA_001520835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/835/GCA_001520835.1_ASM152083v1	-	GN02707
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.87769	52	-	MXCR01	96	4956	4663	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357114	GCA_002037115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/115/GCA_002037115.1_ASM203711v1	-	BCW_2485
Staphylococcus aureus subsp. aureus 21342	904772	PRJNA53697	53697	Terrabacteria group	Firmicutes	2.81549	32.7	-	AHKU01	108	2935	2744	2/1/12	3/2/17	Contig	J. Craig Venter Institute	SAMN00117467	GCA_000245575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/575/GCA_000245575.2_ASM24557v2	-	21342
Staphylococcus aureus subsp. aureus 21343	904773	PRJNA53699	53699	Terrabacteria group	Firmicutes	2.81994	32.7	-	AHKV01	61	2994	2823	2/1/12	3/2/17	Contig	J. Craig Venter Institute	SAMN00116875	GCA_000245595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/595/GCA_000245595.2_ASM24559v2	-	21343
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.82315	52	-	MXCO01	85	4891	4601	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357117	GCA_002037135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/135/GCA_002037135.1_ASM203713v1	-	BCW_2488
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.137	50.6	-	LQVK01	306	5573	4983	1/20/16	2/25/17	Contig	JCVI	SAMN04388543	GCA_001520845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/845/GCA_001520845.1_ASM152084v1	-	GN02820
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3651	65.6	-	COTE01	110	4296	4077	3/22/15	3/11/17	Scaffold	SC	SAMEA1403600	GCA_001379315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/315/GCA_001379315.1_7755_5_65	-	0868V
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12253	39.6	-	CKQQ01	47	2364	2129	3/21/15	3/11/17	Scaffold	SC	SAMEA1024937	GCA_001123125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/125/GCA_001123125.1_6680_7_19	-	SMRU979
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21678	39.6	-	CPQV01	90	2475	2196	3/23/15	3/11/17	Scaffold	SC	SAMEA1408344	GCA_001123185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/185/GCA_001123185.1_7444_8_47	-	0009+01095
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36523	65.6	-	CHIY01	108	4302	4083	4/21/15	3/11/17	Scaffold	SC	SAMEA1403602	GCA_001379335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/335/GCA_001379335.1_7841_6_34	-	1860Y
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.11451	50.6	-	LQUB01	187	5458	5045	1/20/16	2/25/17	Contig	JCVI	SAMN03922985	GCA_001520875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/875/GCA_001520875.1_ASM152087v1	-	GN02476
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.91122	52	-	MXCP01	85	4980	4685	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357116	GCA_002037155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/155/GCA_002037155.1_ASM203715v1	-	BCW_2487
Staphylococcus aureus subsp. aureus 21345	904774	PRJNA53701	53701	Terrabacteria group	Firmicutes	2.77488	32.7	-	AHKW01	67	2914	2739	2/1/12	3/2/17	Contig	J. Craig Venter Institute	SAMN00117461	GCA_000245615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/245/615/GCA_000245615.2_ASM24561v2	-	21345
Staphylococcus aureus subsp. aureus IS-3	904775	PRJNA53785	53785	Terrabacteria group	Firmicutes	2.89639	32.8	-	AHLL01	91	3093	2879	2/8/12	3/2/17	Contig	J. Craig Venter Institute	SAMN02436431	GCA_000247275.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/275/GCA_000247275.2_ASM24727v2	-	IS-3
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.84979	52	-	MXCS01	104	4933	4627	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357113	GCA_002037185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/185/GCA_002037185.1_ASM203718v1	-	BCW_2484
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	4.94018	50.5	-	LQTP01	223	5205	4745	1/20/16	2/25/17	Contig	JCVI	SAMN03922971	GCA_001520895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/895/GCA_001520895.1_ASM152089v1	-	GN02411
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35774	65.6	-	CONC01	86	4273	4089	3/23/15	3/11/17	Scaffold	SC	SAMEA1403603	GCA_001379355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/355/GCA_001379355.1_7156_7_62	-	0990C
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12588	39.5	-	CLYE01	42	2354	2114	3/21/15	3/11/17	Scaffold	SC	SAMEA1029163	GCA_001123225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/225/GCA_001123225.1_6983_6_47	-	SMRU2351
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07516	39.6	-	CKSR01	62	2271	2046	3/21/15	3/11/17	Scaffold	SC	SAMEA1025327	GCA_001123245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/245/GCA_001123245.1_6807_3_12	-	SMRU1620
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36578	65.6	-	COUS01	119	4288	4074	3/22/15	3/11/17	Scaffold	SC	SAMEA1403606	GCA_001379375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/375/GCA_001379375.1_7769_7_21	-	1284X
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	4.97395	50.8	-	LQVP01	267	5344	4834	1/20/16	2/25/17	Contig	JCVI	SAMN04388548	GCA_001520915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/915/GCA_001520915.1_ASM152091v1	-	GN03204
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.01156	51.9	-	MXCT01	105	5113	4800	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357112	GCA_002037195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/195/GCA_002037195.1_ASM203719v1	-	BCW_2483
Staphylococcus aureus subsp. aureus IS-88	904778	PRJNA53791	53791	Terrabacteria group	Firmicutes	2.87417	32.6	-	AHLO01	79	3058	2853	2/8/12	3/2/17	Contig	J. Craig Venter Institute	SAMN02436366	GCA_000247355.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/355/GCA_000247355.2_ASM24735v2	-	IS-88
Staphylococcus aureus subsp. aureus IS-105	904781	PRJNA53797	53797	Terrabacteria group	Firmicutes	2.77546	32.7	-	AHLR01	127	2931	2681	2/8/12	3/2/17	Contig	J. Craig Venter Institute	SAMN00189691	GCA_000247375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/375/GCA_000247375.2_ASM24737v2	-	IS-105
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.90604	52	-	MXCU01	63	4984	4692	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357111	GCA_002037225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/225/GCA_002037225.1_ASM203722v1	-	BCW_2482
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.20735	50.6	-	LQVQ01	343	5609	5009	1/20/16	2/25/17	Contig	JCVI	SAMN04388549	GCA_001520935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/935/GCA_001520935.1_ASM152093v1	-	GN03218
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37042	65.6	-	COTG01	128	4300	4088	3/22/15	3/11/17	Scaffold	SC	SAMEA1403607	GCA_001379395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/395/GCA_001379395.1_7755_5_66	-	0869W
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.0621	39.6	-	CJZR01	69	2243	1988	3/21/15	3/11/17	Scaffold	SC	SAMEA974685	GCA_001123405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/405/GCA_001123405.1_6259_5_20	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	1.95069	39.8	-	CMEQ01	47	2135	1924	3/21/15	3/4/17	Scaffold	SC	SAMEA1028803	GCA_001123505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/505/GCA_001123505.1_7011_5_19	-	SMRU2803
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36374	65.6	-	COPC01	109	4287	4078	3/23/15	3/11/17	Scaffold	SC	SAMEA1403608	GCA_001379415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/415/GCA_001379415.1_7755_2_23	-	0228Z
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	4.84352	50.6	-	LQVR01	197	5081	4595	1/20/16	2/25/17	Contig	JCVI	SAMN04388550	GCA_001520955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/955/GCA_001520955.1_ASM152095v1	-	GN03252
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.84986	52.2	-	MXCX01	76	4976	4737	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357108	GCA_002037245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/245/GCA_002037245.1_ASM203724v1	-	BCW_2479
Staphylococcus aureus subsp. aureus IS-111	904782	PRJNA53799	53799	Terrabacteria group	Firmicutes	2.93525	32.7	-	AHLS01	147	3184	2904	2/8/12	3/2/17	Contig	J. Craig Venter Institute	SAMN00189692	GCA_000247395.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/395/GCA_000247395.2_ASM24739v2	-	IS-111
Staphylococcus aureus subsp. aureus IS-122	904783	PRJNA53801	53801	Terrabacteria group	Firmicutes	2.8083	32.7	-	AHLT01	96	2959	2766	2/8/12	3/2/17	Contig	J. Craig Venter Institute	SAMN00189693	GCA_000247415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/415/GCA_000247415.2_ASM24741v2	-	IS-122
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.01779	52	-	MXCY01	62	5204	4938	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357107	GCA_002037265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/265/GCA_002037265.1_ASM203726v1	-	BCW_2476
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.09122	50.8	-	LQWA01	303	5505	4982	1/20/16	2/25/17	Contig	JCVI	SAMN04388559	GCA_001520975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/975/GCA_001520975.1_ASM152097v1	-	GN03599
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37937	65.6	-	CONB01	101	4297	4106	3/23/15	3/11/17	Scaffold	SC	SAMEA1403609	GCA_001379435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/435/GCA_001379435.1_7156_7_63	-	0991D
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07267	39.6	-	CRGN01	43	2278	2027	3/23/15	3/6/17	Scaffold	SC	SAMEA1025582	GCA_001123545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/545/GCA_001123545.1_6736_5_5	-	SMRU1229
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.16755	39.5	-	CPUI01	292	2343	2137	3/23/15	3/4/17	Scaffold	SC	SAMEA682294	GCA_001123585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/585/GCA_001123585.1_5392_5_8	-	spnIC52
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39082	65.6	-	COTU01	116	4317	4111	3/23/15	3/11/17	Scaffold	SC	SAMEA1403610	GCA_001379455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/455/GCA_001379455.1_7755_5_85	-	0972H
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.31347	50.3	-	LQVM01	236	5584	5114	1/20/16	2/25/17	Contig	JCVI	SAMN04388545	GCA_001520995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/520/995/GCA_001520995.1_ASM152099v1	-	GN02953
"Salmonella enterica subsp. enterica serovar 4,[5],12:r:-"	1192775	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83163	52.1	-	MXDA01	171	5024	4686	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368081	GCA_002037285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/285/GCA_002037285.1_ASM203728v1	-	SAL3276
Staphylococcus aureus subsp. aureus CIG1057	931432	PRJNA60651	60651	Terrabacteria group	Firmicutes	2.96876	32.9	-	AHVK01	15	3132	2953	2/22/12	3/2/17	Contig	University of Maryland	SAMN02435806	GCA_000248475.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/475/GCA_000248475.2_ASM24847v2	-	CIG1057
Staphylococcus aureus subsp. aureus CIG1114	931433	PRJNA60653	60653	Terrabacteria group	Firmicutes	2.93921	32.8	-	AHKD01	15	3131	2939	2/22/12	3/2/17	Contig	University of Maryland	SAMN00627112	GCA_000248495.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/495/GCA_000248495.2_ASM24849v2	-	CIG1114
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.71509	52.1	-	MXCZ01	70	4790	4547	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368082	GCA_002037295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/295/GCA_002037295.1_ASM203729v1	-	SAL3277
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.07894	50.5	-	LQVL01	211	5396	4879	1/20/16	2/25/17	Contig	JCVI	SAMN04388544	GCA_001521015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/015/GCA_001521015.1_ASM152101v1	-	GN02867
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36656	65.6	-	COTH01	107	4287	4078	3/23/15	3/11/17	Scaffold	SC	SAMEA1403611	GCA_001379475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/475/GCA_001379475.1_7755_5_67	-	0874B
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.99259	39.6	-	CKLM01	80	2179	1978	3/21/15	3/4/17	Scaffold	SC	SAMEA1023984	GCA_001123665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/665/GCA_001123665.1_6641_6_23	-	35F
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.06953	39.9	-	CPOK01	93	2222	2046	3/23/15	3/4/17	Scaffold	SC	SAMEA682541	GCA_001123725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/725/GCA_001123725.1_5429_8_11	-	09B10330
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38424	65.6	-	COVP01	99	4304	4106	3/22/15	3/11/17	Scaffold	SC	SAMEA1403612	GCA_001379495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/495/GCA_001379495.1_7769_7_48	-	1503K
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.29004	50.6	-	LQUS01	367	5742	5048	1/20/16	2/25/17	Contig	JCVI	SAMN03922948	GCA_001521025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/025/GCA_001521025.1_ASM152102v1	-	GN02614
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.94444	52.1	-	MXDB01	178	5164	4840	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368080	GCA_002037325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/325/GCA_002037325.1_ASM203732v1	-	SAL3275
Staphylococcus aureus subsp. aureus CIG1165	931434	PRJNA60655	60655	Terrabacteria group	Firmicutes	2.94071	32.7	-	AHVE01	16	3097	2915	2/22/12	3/2/17	Contig	University of Maryland	SAMN00627114	GCA_000248515.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/515/GCA_000248515.2_ASM24851v2	-	CIG1165
Staphylococcus aureus subsp. aureus CIG1214	931435	PRJNA60657	60657	Terrabacteria group	Firmicutes	3.02778	32.9	-	AHVM01	16	3201	2975	2/22/12	3/2/17	Contig	University of Maryland	SAMN00627117	GCA_000248535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/535/GCA_000248535.2_ASM24853v2	-	CIG1214
"Salmonella enterica subsp. enterica serovar 4,12:r:-"	1192776	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83291	52.1	-	MXDC01	505	5215	4634	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368079	GCA_002037345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/345/GCA_002037345.1_ASM203734v1	-	SAL3274
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.41633	50.7	-	LQTX01	282	5857	5318	1/20/16	2/25/17	Contig	JCVI	SAMN03922979	GCA_001521055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/055/GCA_001521055.1_ASM152105v1	-	GN02448
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37575	65.6	-	COXX01	95	4288	4090	3/23/15	3/11/17	Scaffold	SC	SAMEA1403613	GCA_001379515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/515/GCA_001379515.1_7841_6_35	-	1862A
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.29167	39.2	-	CKLS01	160	2529	2221	3/21/15	3/4/17	Scaffold	SC	SAMEA1023968	GCA_001123925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/925/GCA_001123925.1_6641_6_24	-	6B
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.07733	39.7	-	CMKD01	43	2295	2084	3/22/15	3/4/17	Scaffold	SC	SAMEA1029176	GCA_001123945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/945/GCA_001123945.1_7054_4_13	-	SMRU3037
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36825	65.6	-	COZL01	115	4300	4082	3/22/15	3/11/17	Scaffold	SC	SAMEA1403614	GCA_001379535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/535/GCA_001379535.1_7841_7_90	-	2071C
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.47115	50.4	-	LQTW01	170	5717	5280	1/20/16	2/25/17	Contig	JCVI	SAMN03922978	GCA_001521075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/075/GCA_001521075.1_ASM152107v1	-	GN02446
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.78362	52	-	MXDD01	77	4878	4636	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368078	GCA_002037355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/355/GCA_002037355.1_ASM203735v1	-	SAL3273
Staphylococcus aureus subsp. aureus CIG1242	931436	PRJNA60659	60659	Terrabacteria group	Firmicutes	3.01744	32.8	-	AIEO01	54	3149	2916	2/22/12	3/5/17	Contig	University of Maryland	SAMN00627119	GCA_000248555.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/555/GCA_000248555.3_ASM24855v3	-	CIG1242
Staphylococcus aureus subsp. aureus CIG1500	931437	PRJNA60661	60661	Terrabacteria group	Firmicutes	3.06947	32.9	-	AIEP01	20	3228	2996	2/22/12	3/2/17	Contig	University of Maryland	SAMN00627545	GCA_000248575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/575/GCA_000248575.2_ASM24857v2	-	CIG1500
"Salmonella enterica subsp. enterica serovar 4,12:r:-"	1192776	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.88256	52	-	MXDE01	97	5026	4756	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368076	GCA_002037385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/385/GCA_002037385.1_ASM203738v1	-	SAL3271
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.1569	50.7	-	LQVN01	296	5592	5032	1/20/16	2/25/17	Contig	JCVI	SAMN04388546	GCA_001521095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/095/GCA_001521095.1_ASM152109v1	-	GN03132
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35555	65.6	-	COXZ01	103	4291	4081	3/23/15	3/11/17	Scaffold	SC	SAMEA1403618	GCA_001379575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/575/GCA_001379575.1_7841_6_36	-	1864C
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.15114	39.6	-	CLAQ01	43	2332	2113	3/21/15	3/4/17	Scaffold	SC	SAMEA1025469	GCA_001123985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/985/GCA_001123985.1_6841_7_14	-	SMRU1334
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21691	39.6	-	CPQK01	97	2466	2212	3/23/15	3/4/17	Scaffold	SC	SAMEA1408333	GCA_001124045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/045/GCA_001124045.1_7444_8_51	-	0102+01171
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37165	65.6	-	COMK01	102	4294	4104	3/22/15	3/11/17	Scaffold	SC	SAMEA1403619	GCA_001379595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/595/GCA_001379595.1_7156_6_47	-	0746M
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.0795	50.6	-	LQWC01	183	5365	4903	1/20/16	2/25/17	Contig	JCVI	SAMN04388561	GCA_001521115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/115/GCA_001521115.1_ASM152111v1	-	GN03661
"Salmonella enterica subsp. enterica serovar 4,12:r:-"	1192776	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83379	52.1	-	MXDF01	287	4994	4666	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368075	GCA_002037405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/405/GCA_002037405.1_ASM203740v1	-	SAL3270
Staphylococcus aureus subsp. aureus CIG1605	931438	PRJNA60663	60663	Terrabacteria group	Firmicutes	2.97444	32.9	-	AHKE01	14	3126	2898	2/22/12	3/2/17	Contig	University of Maryland	SAMN00627547	GCA_000248595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/595/GCA_000248595.2_ASM24859v2	-	CIG1605
Staphylococcus aureus subsp. aureus CIG1750	931439	PRJNA60665	60665	Terrabacteria group	Firmicutes	2.97515	32.9	-	AHVX01	43	3166	2961	2/22/12	3/2/17	Contig	University of Maryland	SAMN00672560	GCA_000248615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/615/GCA_000248615.2_ASM24861v2	-	CIG1750
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.74975	52.1	-	MXDH01	88	4859	4606	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368073	GCA_002037425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/425/GCA_002037425.1_ASM203742v1	-	SAL3268
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.26175	50.8	-	LQVD01	429	5776	5114	1/20/16	2/25/17	Contig	JCVI	SAMN04388534	GCA_001521135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/135/GCA_001521135.1_ASM152113v1	-	GN02699
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3649	65.6	-	COOX01	108	4284	4086	3/23/15	3/11/17	Scaffold	SC	SAMEA1403620	GCA_001379615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/615/GCA_001379615.1_7755_2_17	-	0149N
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.05639	39.5	-	CMPT01	98	2269	2021	3/23/15	3/11/17	Scaffold	SC	SAMEA2061728	GCA_001124085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/085/GCA_001124085.1_9803_7_65	-	15C
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.17077	39.7	-	CKGE01	153	2402	2138	3/21/15	3/11/17	Scaffold	SC	SAMEA1024176	GCA_001124145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/145/GCA_001124145.1_6630_4_9	-	6B
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37556	65.6	-	CONU01	90	4301	4115	3/23/15	3/11/17	Scaffold	SC	SAMEA1403621	GCA_001379635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/635/GCA_001379635.1_7156_7_89	-	1660F
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.06595	50.5	-	LQVJ01	256	5405	4894	1/20/16	2/25/17	Contig	JCVI	SAMN04388542	GCA_001521155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/155/GCA_001521155.1_ASM152115v1	-	GN02787
"Salmonella enterica subsp. enterica serovar 4,[5],12:r:-"	1192775	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.74903	52.1	-	MXDG01	102	4877	4618	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368074	GCA_002037435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/435/GCA_002037435.1_ASM203743v1	-	SAL3269
Staphylococcus aureus subsp. aureus CIG1769	931440	PRJNA60667	60667	Terrabacteria group	Firmicutes	2.85511	32.8	-	AHVG01	27	3008	2832	2/22/12	3/2/17	Contig	University of Maryland	SAMN00627548	GCA_000248635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/635/GCA_000248635.2_ASM24863v2	-	CIG1769
Staphylococcus aureus subsp. aureus CIG1835	931441	PRJNA60669	60669	Terrabacteria group	Firmicutes	2.83047	32.8	-	AIEQ01	12	2961	2799	2/22/12	3/2/17	Contig	University of Maryland	SAMN00627551	GCA_000248655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/655/GCA_000248655.2_ASM24865v2	-	CIG1835
"Salmonella enterica subsp. enterica serovar 4,12:r:-"	1192776	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.8783	52	-	MXDI01	130	5033	4769	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368072	GCA_002037465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/465/GCA_002037465.1_ASM203746v1	-	SAL3267
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.12364	50.8	-	LQUM01	319	5534	4995	1/20/16	2/25/17	Contig	JCVI	SAMN03922997	GCA_001521175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/175/GCA_001521175.1_ASM152117v1	-	GN02556
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36273	65.6	-	COMX01	97	4269	4079	3/23/15	3/11/17	Scaffold	SC	SAMEA1403623	GCA_001379655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/655/GCA_001379655.1_7156_7_61	-	0988A
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.07975	39.7	-	CLFK01	71	2292	2084	3/21/15	3/11/17	Scaffold	SC	SAMEA1026234	GCA_001124205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/205/GCA_001124205.1_6899_7_20	-	SMRU2108
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12992	39.6	-	CLTQ01	67	2345	2116	3/21/15	3/11/17	Scaffold	SC	SAMEA1028736	GCA_001124225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/225/GCA_001124225.1_6972_5_22	-	SMRU2638
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37445	65.6	-	COOT01	86	4297	4104	3/23/15	3/11/17	Scaffold	SC	SAMEA1403624	GCA_001379675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/675/GCA_001379675.1_7755_2_16	-	0139C
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	4.80569	50.5	-	LQSY01	207	5069	4596	1/20/16	2/25/17	Contig	JCVI	SAMN03922951	GCA_001521195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/195/GCA_001521195.1_ASM152119v1	-	GN02314
Salmonella enterica subsp. enterica	59201	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.98916	51.8	-	MXDJ01	378	5279	4826	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368071	GCA_002037475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/475/GCA_002037475.1_ASM203747v1	-	SAL3266
Staphylococcus aureus subsp. aureus CIG547	931442	PRJNA60671	60671	Terrabacteria group	Firmicutes	2.88222	32.7	-	AHVQ01	12	3022	2851	2/22/12	3/2/17	Contig	University of Maryland	SAMN00627563	GCA_000248675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/675/GCA_000248675.2_ASM24867v2	-	CIG547
Staphylococcus aureus subsp. aureus CIG1096	931443	PRJNA60673	60673	Terrabacteria group	Firmicutes	2.90817	32.9	-	AIER01	12	3043	2868	2/22/12	3/2/17	Contig	University of Maryland	SAMN02435805	GCA_000248695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/695/GCA_000248695.2_ASM24869v2	-	CIG1096
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.86502	52.1	-	MXDK01	73	4984	4737	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02368069	GCA_002037505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/505/GCA_002037505.1_ASM203750v1	-	CFSAN005844
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.1662	50.8	-	LQUN01	362	5604	5020	1/20/16	2/25/17	Contig	JCVI	SAMN03922998	GCA_001521205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/205/GCA_001521205.1_ASM152120v1	-	GN02560
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36944	65.6	-	COOQ01	114	4291	4084	3/23/15	3/11/17	Scaffold	SC	SAMEA1403625	GCA_001379695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/695/GCA_001379695.1_7755_2_1	-	type strain: 0039
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.23841	39.9	-	CJZQ01	58	2473	2241	3/21/15	3/11/17	Scaffold	SC	SAMEA974681	GCA_001124245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/245/GCA_001124245.1_6259_5_18	-	6A
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12371	39.7	-	CLXE01	64	2298	2035	3/21/15	3/11/17	Scaffold	SC	SAMEA1028634	GCA_001124265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/265/GCA_001124265.1_6983_5_4	-	SMRU2308
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38648	65.6	-	CONT01	99	4300	4095	3/22/15	3/11/17	Scaffold	SC	SAMEA1403626	GCA_001379715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/715/GCA_001379715.1_7156_7_90	-	1673V
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	4.85447	50.5	-	LQSV01	178	5106	4675	1/20/16	2/25/17	Contig	JCVI	SAMN03922935	GCA_001521215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/215/GCA_001521215.1_ASM152121v1	-	GN02289
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72309	52.1	-	MXDL01	28	4829	4583	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357106	GCA_002037525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/525/GCA_002037525.1_ASM203752v1	-	BCW_2448
Staphylococcus aureus subsp. aureus CIG1150	931444	PRJNA60675	60675	Terrabacteria group	Firmicutes	2.81624	32.7	-	AHVH01	40	2944	2772	2/22/12	3/2/17	Contig	University of Maryland	SAMN00627113	GCA_000248715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/715/GCA_000248715.2_ASM24871v2	-	CIG1150
Staphylococcus aureus subsp. aureus CIG1176	931445	PRJNA60677	60677	Terrabacteria group	Firmicutes	3.02553	32.9	-	AHVJ01	20	3204	2969	2/22/12	3/2/17	Contig	University of Maryland	SAMN00627115	GCA_000248735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/735/GCA_000248735.2_ASM24873v2	-	CIG1176
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.87065	52.2	-	MXCW01	48	5010	4764	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357109	GCA_002037545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/545/GCA_002037545.1_ASM203754v1	-	BCW_2480
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.25091	50.4	-	LQTE01	204	5500	5046	1/20/16	2/25/17	Contig	JCVI	SAMN03922957	GCA_001521225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/225/GCA_001521225.1_ASM152122v1	-	GN02350
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36719	65.6	-	COYB01	121	4298	4076	3/23/15	3/11/17	Scaffold	SC	SAMEA1403627	GCA_001379735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/735/GCA_001379735.1_7841_6_38	-	1868G
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.11793	39.7	-	CRGX01	43	2308	2067	3/23/15	3/11/17	Scaffold	SC	SAMEA1025112	GCA_001124305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/305/GCA_001124305.1_6736_6_9	-	SMRU1257
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.317	39.3	-	CMPS01	186	2523	2256	3/22/15	3/11/17	Scaffold	SC	SAMEA2061934	GCA_001124325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/325/GCA_001124325.1_9803_7_68	-	38
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36951	65.6	-	COMA01	108	4290	4075	3/23/15	3/11/17	Scaffold	SC	SAMEA1403628	GCA_001379755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/755/GCA_001379755.1_7156_6_48	-	0761D
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	4.75235	50.7	-	LQUH01	168	4974	4566	1/20/16	2/25/17	Contig	JCVI	SAMN03922992	GCA_001521275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/275/GCA_001521275.1_ASM152127v1	-	GN02531
"Salmonella enterica subsp. houtenae serovar 11:z4,z23:-"	1967605	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.82107	52.1	-	MXOL01	61	4925	4670	3/17/17	3/20/17	Contig	University of California at Davis	SAMN02367597	GCA_002037585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/585/GCA_002037585.1_ASM203758v1	-	BCW_1547
Staphylococcus aureus subsp. aureus CIG1213	931446	PRJNA60679	60679	Terrabacteria group	Firmicutes	2.9362	32.8	-	AHVF01	16	3116	2924	2/22/12	3/2/17	Contig	University of Maryland	SAMN00627116	GCA_000248755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/755/GCA_000248755.2_ASM24875v2	-	CIG1213
Staphylococcus aureus subsp. aureus CIG1233	931447	PRJNA60681	60681	Terrabacteria group	Firmicutes	2.98369	32.9	-	AHVU01	14	3102	2876	2/22/12	3/2/17	Contig	University of Maryland	SAMN00627118	GCA_000248775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/775/GCA_000248775.2_ASM24877v2	-	CIG1233
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.6379	51.8	-	MXOK01	98	4692	4308	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356950	GCA_002037595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/595/GCA_002037595.1_ASM203759v1	-	BCW_1548
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.26653	50.5	-	LQUA01	122	5387	5046	1/20/16	2/25/17	Contig	JCVI	SAMN03922983	GCA_001521285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/285/GCA_001521285.1_ASM152128v1	-	GN02461
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37338	65.6	-	COPB01	96	4306	4116	3/23/15	3/11/17	Scaffold	SC	SAMEA1403629	GCA_001379775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/775/GCA_001379775.1_7755_2_20	-	0174Q
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.10649	39.5	-	CPKR01	39	2309	2067	3/23/15	3/11/17	Scaffold	SC	SAMEA1020173	GCA_001124445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/445/GCA_001124445.1_6570_2_9	-	SPN13633
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11647	39.6	-	CKUM01	56	2331	2105	3/21/15	3/11/17	Scaffold	SC	SAMEA1025707	GCA_001124625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/625/GCA_001124625.1_6823_2_9	-	SMRU1881
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39824	65.6	-	COXJ01	109	4311	4103	3/23/15	3/11/17	Scaffold	SC	SAMEA1403630	GCA_001379795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/795/GCA_001379795.1_7841_6_14	-	1814Y
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.17851	50.5	-	LQWD01	212	5518	4988	1/20/16	2/25/17	Contig	JCVI	SAMN04388562	GCA_001521315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/315/GCA_001521315.1_ASM152131v1	-	GN03786
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.76024	51.3	-	MXOI01	594	4645	4229	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03356953	GCA_002037615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/615/GCA_002037615.1_ASM203761v1	-	BCW_1551
Staphylococcus aureus subsp. aureus CIG1612	931448	PRJNA60683	60683	Terrabacteria group	Firmicutes	2.95919	32.8	-	AHVW01	18	3127	2960	2/22/12	3/2/17	Contig	University of Maryland	SAMN00627592	GCA_000248795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/795/GCA_000248795.2_ASM24879v2	-	CIG1612
Staphylococcus aureus subsp. aureus CIG1770	931449	PRJNA60685	60685	Terrabacteria group	Firmicutes	2.93736	32.8	-	AHVN01	14	3131	2925	2/22/12	3/2/17	Contig	University of Maryland	SAMN00672571	GCA_000248815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/815/GCA_000248815.2_ASM24881v2	-	CIG1770
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.88328	52	-	MXCV01	84	4957	4664	3/17/17	3/20/17	Contig	University of California at Davis	SAMN03357110	GCA_002037665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/665/GCA_002037665.1_ASM203766v1	-	BCW_2481
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.08513	50.7	-	LQWE01	335	5556	4958	1/20/16	2/25/17	Contig	JCVI	SAMN04388563	GCA_001521335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/335/GCA_001521335.1_ASM152133v1	-	GN03838
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3533	65.6	-	COYA01	113	4281	4078	3/23/15	3/11/17	Scaffold	SC	SAMEA1403632	GCA_001379815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/815/GCA_001379815.1_7841_6_39	-	1869H
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12895	39.5	-	CLNV01	72	2374	2127	3/21/15	3/11/17	Scaffold	SC	SAMEA1028733	GCA_001124645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/645/GCA_001124645.1_6949_1_10	-	SMRU2410
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.19861	39.5	-	CLRT01	95	2414	2188	3/21/15	3/11/17	Scaffold	SC	SAMEA1028654	GCA_001124785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/785/GCA_001124785.1_6972_3_15	-	SMRU2583
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37753	65.6	-	COMQ01	95	4293	4112	3/22/15	3/11/17	Scaffold	SC	SAMEA1403633	GCA_001379835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/835/GCA_001379835.1_7156_7_49	-	0765H
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.21396	50.4	-	LQUL01	277	5562	5013	1/20/16	2/25/17	Contig	JCVI	SAMN03922996	GCA_001521355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/355/GCA_001521355.1_ASM152135v1	-	GN02547
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70208	52.1	-	MZQA01	39	4817	4556	3/20/17	8/3/17	Contig	Center for Food Safety and Applied Nutrition	SAMN06074002	GCA_002039715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/715/GCA_002039715.1_ASM203971v1	28705959	CFSAN057679
Staphylococcus aureus subsp. aureus CIG2018	931450	PRJNA60687	60687	Terrabacteria group	Firmicutes	2.9667	32.9	-	AHVV01	18	3133	2972	2/22/12	3/2/17	Contig	University of Maryland	SAMN00678219	GCA_000248835.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/835/GCA_000248835.2_ASM24883v2	-	CIG2018
Staphylococcus aureus subsp. aureus CIG290	931451	PRJNA60689	60689	Terrabacteria group	Firmicutes	2.90478	32.9	-	AIES01	19	3002	2801	2/22/12	3/2/17	Contig	University of Maryland	SAMN00627552	GCA_000248855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/855/GCA_000248855.2_ASM24885v2	-	CIG290
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69952	52.1	-	MZUO01	32	4799	4563	3/20/17	8/3/17	Contig	Center for Food Safety and Applied Nutrition	SAMN06074125	GCA_002041035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/035/GCA_002041035.1_ASM204103v1	28705959	CFSAN057799
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.20063	50.7	-	LQWH01	304	5634	5033	1/20/16	2/25/17	Contig	JCVI	SAMN04388567	GCA_001521375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/375/GCA_001521375.1_ASM152137v1	-	GN04124
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39022	65.6	-	COXL01	151	4344	4106	3/23/15	3/11/17	Scaffold	SC	SAMEA1403636	GCA_001379855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/855/GCA_001379855.1_7841_6_15	-	1815Z
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.19527	39.4	-	CLLF01	90	2433	2177	3/21/15	3/4/17	Scaffold	SC	SAMEA1028921	GCA_001125045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/045/GCA_001125045.1_6938_5_3	-	SMRU2643
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.16314	39.5	-	CLQC01	68	2354	2128	3/21/15	3/4/17	Scaffold	SC	SAMEA1028643	GCA_001125065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/065/GCA_001125065.1_6949_4_20	-	SMRU2492
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36799	65.6	-	COLJ01	110	4293	4081	3/23/15	3/11/17	Scaffold	SC	SAMEA1403637	GCA_001379875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/875/GCA_001379875.1_7156_6_21	-	0873A
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.19026	50.8	-	LQWK01	316	5568	5009	1/20/16	2/25/17	Contig	JCVI	SAMN04388570	GCA_001521395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/395/GCA_001521395.1_ASM152139v1	-	GN04228
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70146	52.1	-	MZUR01	31	4817	4567	3/20/17	8/3/17	Contig	Center for Food Safety and Applied Nutrition	SAMN06074122	GCA_002041145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/145/GCA_002041145.1_ASM204114v1	28705959	CFSAN057802
Staphylococcus aureus subsp. aureus CIG1267	931452	PRJNA60691	60691	Terrabacteria group	Firmicutes	3.00425	32.9	-	AHVS01	14	3162	2918	2/22/12	3/2/17	Contig	University of Maryland	SAMN00627120	GCA_000248875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/875/GCA_000248875.2_ASM24887v2	-	CIG1267
Staphylococcus aureus subsp. aureus CIG149	931453	PRJNA60693	60693	Terrabacteria group	Firmicutes	2.93872	32.8	-	AHVP01	29	3087	2858	2/22/12	3/2/17	Contig	University of Maryland	SAMN00627544	GCA_000248895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/895/GCA_000248895.2_ASM24889v2	-	CIG149
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89627	52.2	-	MYUD01	98	5030	4778	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360205	GCA_002043065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/065/GCA_002043065.1_ASM204306v1	-	BCW_6654
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	4.88174	50.6	-	LQWN01	147	4977	4639	1/20/16	2/25/17	Contig	JCVI	SAMN04388573	GCA_001521415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/415/GCA_001521415.1_ASM152141v1	-	GN04306
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36533	65.6	-	COMP01	113	4293	4078	3/23/15	3/11/17	Scaffold	SC	SAMEA1403638	GCA_001379895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/895/GCA_001379895.1_7156_7_50	-	0770N
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.04651	39.7	-	CRAM01	69	2249	2035	3/22/15	3/4/17	Scaffold	SC	SAMEA1024544	GCA_001125125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/125/GCA_001125125.1_6730_6_9	-	SMRU681
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14763	39.6	-	CKEY01	156	2385	2125	3/21/15	3/4/17	Scaffold	SC	SAMEA1024102	GCA_001125165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/165/GCA_001125165.1_6630_2_7	-	14
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36876	65.6	-	COYC01	122	4302	4084	3/23/15	3/11/17	Scaffold	SC	SAMEA1403642	GCA_001379915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/915/GCA_001379915.1_7841_6_41	-	1871K
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	4.94046	50.4	-	LQWJ01	213	5234	4761	1/20/16	2/25/17	Contig	JCVI	SAMN04388569	GCA_001521435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/435/GCA_001521435.1_ASM152143v1	-	GN04208
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.87749	52.1	-	MYUC01	38	5026	4713	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360206	GCA_002043075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/075/GCA_002043075.1_ASM204307v1	-	BCW_6659
Staphylococcus aureus subsp. aureus CIG1524	931454	PRJNA60695	60695	Terrabacteria group	Firmicutes	2.75148	32.9	-	AHVI01	12	2835	2656	2/22/12	3/2/17	Contig	University of Maryland	SAMN00627546	GCA_000248915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/915/GCA_000248915.2_ASM24891v2	-	CIG1524
Staphylococcus aureus subsp. aureus CIGC340D	931455	PRJNA60697	60697	Terrabacteria group	Firmicutes	2.78521	32.8	-	AHVR01	9	2878	2706	2/22/12	3/2/17	Contig	University of Maryland	SAMN00672572	GCA_000248935.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/935/GCA_000248935.2_ASM24893v2	-	CIGC340D
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.9418	52.1	-	MYUE01	69	5089	4772	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360201	GCA_002043145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/145/GCA_002043145.1_ASM204314v1	-	BCW_6623
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.15802	50.5	-	LQWM01	145	5447	5065	1/20/16	2/25/17	Contig	JCVI	SAMN04388572	GCA_001521455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/455/GCA_001521455.1_ASM152145v1	-	GN04262
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36516	65.6	-	COQN01	109	4296	4088	3/23/15	3/11/17	Scaffold	SC	SAMEA1403643	GCA_001379935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/935/GCA_001379935.1_7755_3_66	-	0433X
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10615	39.5	-	CLZI01	67	2318	2066	3/21/15	3/4/17	Scaffold	SC	SAMEA1028823	GCA_001125185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/185/GCA_001125185.1_6983_8_81	-	SMRU2385
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.04463	39.7	-	CREN01	59	2211	1949	3/23/15	3/9/17	Scaffold	SC	SAMEA1024931	GCA_001125225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/225/GCA_001125225.1_6731_5_4	-	SMRU1084
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36465	65.6	-	COXI01	116	4288	4072	3/23/15	3/11/17	Scaffold	SC	SAMEA1403645	GCA_001379955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/955/GCA_001379955.1_7841_6_17	-	1818C
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.28689	50.6	-	LQWL01	315	5683	5071	1/20/16	2/25/17	Contig	JCVI	SAMN04388571	GCA_001521475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/475/GCA_001521475.1_ASM152147v1	-	GN04255
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.944	52.1	-	MYUF01	62	5104	4774	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360200	GCA_002043155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/155/GCA_002043155.1_ASM204315v1	-	BCW_6621
Staphylococcus aureus subsp. aureus CIGC341D	931456	PRJNA60699	60699	Terrabacteria group	Firmicutes	3.05453	32.8	-	AHVL01	23	3238	3001	2/22/12	3/2/17	Contig	University of Maryland	SAMN00627579	GCA_000248955.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/955/GCA_000248955.2_ASM24895v2	-	CIGC341D
Staphylococcus aureus subsp. aureus CIGC345D	931457	PRJNA60701	60701	Terrabacteria group	Firmicutes	2.80866	32.7	-	AHVO01	13	2938	2775	2/22/12	3/2/17	Contig	University of Maryland	SAMN00627580	GCA_000248975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/975/GCA_000248975.2_ASM24897v2	-	CIGC345D
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66993	52.3	-	MYUJ01	33	4710	4466	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360195	GCA_002043165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/165/GCA_002043165.1_ASM204316v1	-	BCW_6586
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.18296	50.8	-	LQWO01	244	5630	5101	1/20/16	2/25/17	Contig	JCVI	SAMN04388574	GCA_001521495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/495/GCA_001521495.1_ASM152149v1	-	GN04318
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36822	65.6	-	COUW01	111	4295	4078	3/22/15	3/11/17	Scaffold	SC	SAMEA1403646	GCA_001379975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/975/GCA_001379975.1_7769_7_29	-	1362G
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.06884	39.6	-	CKEE01	81	2283	2069	3/21/15	3/4/17	Scaffold	SC	SAMEA1023869	GCA_001125365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/365/GCA_001125365.1_6630_1_8	-	11A
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99314	39.7	-	CQQQ01	38	2212	1991	3/23/15	3/6/17	Scaffold	SC	SAMEA970269	GCA_001125385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/385/GCA_001125385.1_5159_6_11	-	BHN624
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36735	65.6	-	CHIV01	106	4296	4086	4/21/15	3/11/17	Scaffold	SC	SAMEA1403647	GCA_001379995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/379/995/GCA_001379995.1_7769_7_42	-	1451D
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	4.99938	50.8	-	LQWP01	203	5318	4873	1/20/16	2/25/17	Contig	JCVI	SAMN04388575	GCA_001521515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/515/GCA_001521515.1_ASM152151v1	-	GN05705
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.88202	52.1	-	MYUL01	64	5031	4707	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360193	GCA_002043205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/205/GCA_002043205.1_ASM204320v1	-	BCW_6571
Staphylococcus aureus subsp. aureus CIGC348	931458	PRJNA60703	60703	Terrabacteria group	Firmicutes	2.93025	32.8	-	AHVT01	24	3076	2926	2/22/12	3/2/17	Contig	University of Maryland	SAMN00627581	GCA_000248995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/248/995/GCA_000248995.2_ASM24899v2	-	CIGC348
Staphylococcus aureus subsp. aureus CIGC128	931459	PRJNA60705	60705	Terrabacteria group	Firmicutes	2.89953	32.8	-	AHVY01	42	3042	2872	2/22/12	3/2/17	Contig	University of Maryland	SAMN00627578	GCA_000249015.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/015/GCA_000249015.2_ASM24901v2	-	CIGC128
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.88212	52.1	-	MYUM01	61	5033	4706	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360192	GCA_002043215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/215/GCA_002043215.1_ASM204321v1	-	BCW_6569
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.05909	50.7	-	LQWR01	225	5402	4914	1/20/16	2/25/17	Contig	JCVI	SAMN04388577	GCA_001521535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/535/GCA_001521535.1_ASM152153v1	-	GN05734
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36678	65.6	-	COVJ01	102	4292	4083	3/22/15	3/11/17	Scaffold	SC	SAMEA1403648	GCA_001380015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/015/GCA_001380015.1_7769_7_41	-	1446Y
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.15211	39.5	-	CPQQ01	38	2366	2109	3/22/15	3/4/17	Scaffold	SC	SAMEA1020351	GCA_001125405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/405/GCA_001125405.1_6570_2_20	-	SPN22664
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.9422	39.8	-	CKBP01	59	2129	1911	3/21/15	3/4/17	Scaffold	SC	SAMEA974660	GCA_001125505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/505/GCA_001125505.1_6259_8_19	-	8
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36489	65.6	-	COQO01	102	4286	4083	3/23/15	3/11/17	Scaffold	SC	SAMEA1403649	GCA_001380035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/035/GCA_001380035.1_7755_3_65	-	0432W
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.13052	50.7	-	LQWQ01	386	5592	5027	1/20/16	2/25/17	Contig	JCVI	SAMN04388576	GCA_001521555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/555/GCA_001521555.1_ASM152155v1	-	GN05712
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.97259	52.2	-	MYUK01	93	5162	4888	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360194	GCA_002043245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/245/GCA_002043245.1_ASM204324v1	-	BCW_6579
Staphylococcus aureus subsp. aureus CIGC93	931460	PRJNA60707	60707	Terrabacteria group	Firmicutes	2.68054	32.8	-	AHVD01	30	2767	2582	2/22/12	3/2/17	Contig	University of Maryland	SAMN00627583	GCA_000249035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/249/035/GCA_000249035.2_ASM24903v2	-	CIGC93
Staphylococcus aureus subsp. aureus DR10	1155079	PRJNA70631	70631	Terrabacteria group	Firmicutes	2.72552	32.8	-	AIDT01	44	2837	2670	3/12/12	3/2/17	Contig	Integrated Genomics	SAMN02469651	GCA_000252405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/405/GCA_000252405.2_ASM25240v2	22375071	DR10
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.71543	52.1	-	MYUR01	84	4814	4543	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360186	GCA_002043255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/255/GCA_002043255.1_ASM204325v1	-	BCW_6510
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.06988	50.5	-	LQVT01	112	5320	4952	1/20/16	2/25/17	Contig	JCVI	SAMN04388552	GCA_001521575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/575/GCA_001521575.1_ASM152157v1	-	GN03324
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36912	65.6	-	COXK01	104	4297	4096	3/22/15	3/11/17	Scaffold	SC	SAMEA1403651	GCA_001380055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/055/GCA_001380055.1_7841_6_18	-	1820E
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.1477	39.5	-	CMEH01	68	2387	2168	3/21/15	3/4/17	Scaffold	SC	SAMEA1029155	GCA_001125565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/565/GCA_001125565.1_7011_4_7	-	SMRU2767
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.21705	39.7	-	CLDA01	67	2438	2208	3/21/15	3/4/17	Scaffold	SC	SAMEA1025882	GCA_001125585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/585/GCA_001125585.1_6899_4_21	-	SMRU2037
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.40034	65.6	-	CORO01	110	4319	4122	3/22/15	3/11/17	Scaffold	SC	SAMEA1403653	GCA_001380075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/075/GCA_001380075.1_7755_4_18	-	0705S
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.181	50.8	-	LQWF01	257	5615	5091	1/20/16	2/25/17	Contig	JCVI	SAMN04388565	GCA_001521595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/595/GCA_001521595.1_ASM152159v1	-	GN04075
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70604	52.2	-	MYUN01	63	4792	4569	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360190	GCA_002043285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/285/GCA_002043285.1_ASM204328v1	-	BCW_6532
Staphylococcus aureus subsp. aureus IS-M	904792	PRJNA53819	53819	Terrabacteria group	Firmicutes	2.81132	32.7	-	AJLD01	49	2952	2730	4/5/12	3/2/17	Contig	J. Craig Venter Institute	SAMN00189695	GCA_000257985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/257/985/GCA_000257985.1_SaureusISMv1.0	-	IS-M
Staphylococcus aureus subsp. aureus CO-23	904795	PRJNA53825	53825	Terrabacteria group	Firmicutes	2.90278	32.6	-	AJKF01	90	3075	2821	4/11/12	8/8/17	Contig	J. Craig Venter Institute	SAMN00138217	GCA_000258475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/258/475/GCA_000258475.1_Saureusco23v1.0	-	CO-23
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7002	52.3	-	MYUT01	76	4795	4541	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360184	GCA_002043345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/345/GCA_002043345.1_ASM204334v1	-	BCW_6499
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.18938	50.7	-	LQWG01	390	5691	5085	1/20/16	2/25/17	Contig	JCVI	SAMN04388566	GCA_001521615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/615/GCA_001521615.1_ASM152161v1	-	GN04094
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36352	65.6	-	COUY01	118	4286	4078	3/22/15	3/11/17	Scaffold	SC	SAMEA1403654	GCA_001380095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/095/GCA_001380095.1_7769_7_28	-	1359D
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12344	39.5	-	CKSZ01	46	2348	2119	3/21/15	3/11/17	Scaffold	SC	SAMEA1025703	GCA_001125605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/605/GCA_001125605.1_6823_1_14	-	SMRU1862
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07541	39.7	-	CKKD01	54	2297	2093	3/21/15	3/11/17	Scaffold	SC	SAMEA1024106	GCA_001125625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/625/GCA_001125625.1_6631_6_24	-	6B
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.40111	65.6	-	COOV01	98	4311	4107	3/22/15	3/11/17	Scaffold	SC	SAMEA1403655	GCA_001380115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/115/GCA_001380115.1_7755_2_15	-	0138B
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.14048	50.6	-	LQWI01	360	5546	4890	1/20/16	2/25/17	Contig	JCVI	SAMN04388568	GCA_001521635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/635/GCA_001521635.1_ASM152163v1	-	GN04153
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.40587	51.8	-	MYUV01	1350	5640	5058	3/20/17	4/11/17	Contig	University of California at Davis	SAMN03360111	GCA_002043365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/365/GCA_002043365.1_ASM204336v1	-	BCW_6308
Staphylococcus aureus subsp. aureus 118	1144271	PRJNA82607	82607	Terrabacteria group	Firmicutes	2.7614	32.6	-	AJGE01	78	2836	2718	4/27/12	3/2/17	Contig	National Center for Biological Sciences	SAMN00780326	GCA_000259715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/715/GCA_000259715.1_S_aureus_118_1	22740659	118
Staphylococcus aureus subsp. aureus IS-157	904785	PRJNA53805	53805	Terrabacteria group	Firmicutes	2.97398	32.7	-	AICH01	185	3211	2943	2/15/12	3/2/17	Contig	J. Craig Venter Institute	SAMN02436496	GCA_000260015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/015/GCA_000260015.1_SaureusIS157v1.0	-	IS-157
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.93157	51.8	-	MYUU01	55	5034	4773	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360112	GCA_002043375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/375/GCA_002043375.1_ASM204337v1	-	BCW_6309
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.1373	50.7	-	LQWS01	244	5536	5055	1/20/16	2/25/17	Contig	JCVI	SAMN04388578	GCA_001521655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/655/GCA_001521655.1_ASM152165v1	-	GN05779
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36275	65.6	-	COYD01	131	4307	4079	3/23/15	3/11/17	Scaffold	SC	SAMEA1403659	GCA_001380175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/175/GCA_001380175.1_7841_6_43	-	1876Q
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.02052	39.7	-	CRAV01	67	2230	1991	3/22/15	3/11/17	Scaffold	SC	SAMEA1024683	GCA_001125645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/645/GCA_001125645.1_6730_7_5	-	SMRU701
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15195	39.5	-	CKNG01	46	2380	2138	3/21/15	3/11/17	Scaffold	SC	SAMEA1023767	GCA_001125685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/685/GCA_001125685.1_6664_1_20	-	20
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39888	65.6	-	COUZ01	102	4311	4087	3/22/15	3/11/17	Scaffold	SC	SAMEA1403660	GCA_001380195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/195/GCA_001380195.1_7769_7_3	-	1164R
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	4.97355	50.7	-	LQWT01	201	5340	4843	1/20/16	2/25/17	Contig	JCVI	SAMN04388579	GCA_001521675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/675/GCA_001521675.1_ASM152167v1	-	GN05793
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.73335	52.2	-	MYVG01	94	4799	4558	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360098	GCA_002043425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/425/GCA_002043425.1_ASM204342v1	-	BCW_6295
Staphylococcus aureus subsp. aureus IS-160	904786	PRJNA53807	53807	Terrabacteria group	Firmicutes	2.79378	32.7	-	AICI01	221	2930	2597	2/15/12	8/8/17	Contig	J. Craig Venter Institute	SAMN00189694	GCA_000260035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/035/GCA_000260035.1_SaureusIS160v1.0	-	IS-160
Staphylococcus aureus subsp. aureus VCU006	904313	PRJNA53705	53705	Terrabacteria group	Firmicutes	2.67929	32.7	-	AGTZ01	37	2771	2574	12/22/11	3/2/17	Contig	J. Craig Venter Institute	SAMN00138234	GCA_000260315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/315/GCA_000260315.1_ASM26031v1	-	VCU006
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80834	52	-	MYVJ01	73	4913	4639	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360094	GCA_002043435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/435/GCA_002043435.1_ASM204343v1	-	BCW_6291
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.19315	50.9	-	LQWB01	418	5662	5024	1/20/16	2/25/17	Contig	JCVI	SAMN04388560	GCA_001521695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/521/695/GCA_001521695.1_ASM152169v1	-	GN03624
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36938	65.6	-	COQM01	118	4296	4082	3/23/15	3/11/17	Scaffold	SC	SAMEA1403661	GCA_001380215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/215/GCA_001380215.1_7755_3_64	-	0413A
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.048	39.7	-	CRJI01	58	2253	2032	3/22/15	3/11/17	Scaffold	SC	SAMEA1025228	GCA_001125705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/705/GCA_001125705.1_6753_2_17	-	SMRU1506
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.14407	39.6	-	CKZB01	43	2378	2145	3/21/15	3/11/17	Scaffold	SC	SAMEA1025985	GCA_001125805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/805/GCA_001125805.1_6840_1_10	-	SMRU1762
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36474	65.6	-	CORP01	96	4280	4095	3/23/15	3/11/17	Scaffold	SC	SAMEA1403664	GCA_001380235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/235/GCA_001380235.1_7755_4_19	-	0717F
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.13757	50.6	-	LRAO01	318	5585	5032	1/22/16	2/25/17	Contig	JCVI	SAMN03922946	GCA_001524885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/885/GCA_001524885.1_ASM152488v1	-	GN02609
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.79905	52	-	MYVI01	66	4864	4613	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360095	GCA_002043465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/465/GCA_002043465.1_ASM204346v1	-	BCW_6292
Staphylococcus aureus subsp. aureus VRS1	1116214	PRJNA76973	76973	Terrabacteria group	Firmicutes	2.92261	32.7	-	AHBK01	123	3122	2922	5/15/12	3/2/17	Contig	Broad Institute	SAMN02596782	GCA_000262815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/815/GCA_000262815.1_VRSA01_3	22617140	VRS1
Staphylococcus aureus subsp. aureus VRS2	1116215	PRJNA76975	76975	Terrabacteria group	Firmicutes	2.97385	32.8	-	AHBL01	97	3151	2940	5/15/12	3/2/17	Contig	Broad Institute	SAMN02596783	GCA_000262835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/835/GCA_000262835.1_VRSA02_3	22617140	VRS2
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.68705	52.2	-	MYVK01	46	4744	4510	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360093	GCA_002043475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/475/GCA_002043475.1_ASM204347v1	-	BCW_6290
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.11552	50.8	-	LRAP01	341	5537	4941	1/22/16	2/25/17	Contig	JCVI	SAMN04388564	GCA_001524895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/895/GCA_001524895.1_ASM152489v1	-	GN04014
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36487	65.6	-	CORR01	127	4307	4092	3/23/15	3/11/17	Scaffold	SC	SAMEA1403666	GCA_001380255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/255/GCA_001380255.1_7755_4_20	-	0720J
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07864	39.6	-	CKAW01	55	2291	2036	3/21/15	3/11/17	Scaffold	SC	SAMEA974625	GCA_001125945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/945/GCA_001125945.1_6259_7_23	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.04492	39.7	-	CPUB01	60	2244	1993	3/23/15	3/11/17	Scaffold	SC	SAMEA1020201	GCA_001125985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/985/GCA_001125985.1_6246_3_22	-	LMG1561
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36969	65.6	-	COOU01	99	4286	4096	3/22/15	3/11/17	Scaffold	SC	SAMEA1403668	GCA_001380295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/295/GCA_001380295.1_7755_2_14	-	0137A
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.11375	50.5	-	LRAN01	232	5492	4995	1/22/16	2/25/17	Contig	JCVI	SAMN03922987	GCA_001524905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/524/905/GCA_001524905.1_ASM152490v1	-	GN02487
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.05063	51.9	-	MYVM01	66	5143	4849	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360091	GCA_002043485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/485/GCA_002043485.1_ASM204348v1	-	BCW_6288
Staphylococcus aureus subsp. aureus VRS3a	1116216	PRJNA76977	76977	Terrabacteria group	Firmicutes	2.89007	32.7	-	AHBM01	91	3052	2851	5/15/12	3/2/17	Contig	Broad Institute	SAMN02596784	GCA_000262855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/855/GCA_000262855.1_VRSA03_3	22617140	VRS3a
Staphylococcus aureus subsp. aureus VRS4	1116217	PRJNA76979	76979	Terrabacteria group	Firmicutes	2.8592	32.8	-	AHBN01	72	3022	2852	5/15/12	3/2/17	Contig	Broad Institute	SAMN02596785	GCA_000262875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/875/GCA_000262875.1_VRSA04_3	22617140	VRS4
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.9863	52.1	-	MYVS01	112	5169	4889	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360085	GCA_002043545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/545/GCA_002043545.1_ASM204354v1	-	BCW_6282
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.72483	50.9	-	LSFT01	298	4925	4627	2/9/16	2/25/17	Contig	US Food and Drug Administration	SAMN04396104	GCA_001554295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/554/295/GCA_001554295.1_ASM155429v1	27056235	KCJ852
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36697	65.6	-	CORF01	114	4296	4080	3/23/15	3/11/17	Scaffold	SC	SAMEA1403670	GCA_001380335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/335/GCA_001380335.1_7755_3_92	-	0590S
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.16986	39.5	-	CLSW01	45	2412	2175	3/21/15	3/11/17	Scaffold	SC	SAMEA1028760	GCA_001126005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/005/GCA_001126005.1_6972_4_19	-	SMRU2611
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.9884	39.8	-	CQUI01	45	2202	1984	3/23/15	3/11/17	Scaffold	SC	SAMEA970286	GCA_001126105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/105/GCA_001126105.1_5242_6_12	-	BHN578
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38319	65.6	-	CORN01	142	4305	4087	3/22/15	3/11/17	Scaffold	SC	SAMEA1403673	GCA_001380375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/375/GCA_001380375.1_7755_4_14	-	0700M
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.1449	50.7	-	LNPW01	83	5366	5077	2/9/16	2/25/17	Contig	Swansea University	SAMN04273059	GCA_001555495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/495/GCA_001555495.1_ASM155549v1	-	852
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.77314	52.1	-	MYVP01	52	4866	4630	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360088	GCA_002043585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/585/GCA_002043585.1_ASM204358v1	-	BCW_6285
Staphylococcus aureus subsp. aureus VRS5	1116218	PRJNA76981	76981	Terrabacteria group	Firmicutes	2.91999	32.8	-	AHBO01	96	3106	2938	5/15/12	3/2/17	Contig	Broad Institute	SAMN02596786	GCA_000262895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/895/GCA_000262895.1_VRSA05_2	22617140	VRS5
Staphylococcus aureus subsp. aureus VRS6	1116219	PRJNA76983	76983	Terrabacteria group	Firmicutes	2.90844	32.8	-	AHBP01	103	3101	2906	5/15/12	3/2/17	Contig	Broad Institute	SAMN02596787	GCA_000262915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/915/GCA_000262915.1_VRSA06_2	22617140	VRS6
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.18546	52.1	-	MYVU01	78	5398	5101	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360083	GCA_002043605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/605/GCA_002043605.1_ASM204360v1	-	BCW_6280
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.22896	50.7	-	LNOM01	162	5491	5163	2/9/16	2/25/17	Contig	Swansea University	SAMN04273060	GCA_001555635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/555/635/GCA_001555635.1_ASM155563v1	-	972
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38167	65.6	-	COTZ01	107	4314	4099	3/23/15	3/11/17	Scaffold	SC	SAMEA1403675	GCA_001380395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/395/GCA_001380395.1_7755_5_90	-	1042J
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.22431	39.5	-	CPKI01	91	2464	2209	3/23/15	3/11/17	Scaffold	SC	SAMEA1408305	GCA_001126205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/205/GCA_001126205.1_7444_8_11	-	9611+04103
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.12619	39.6	-	CKIU01	80	2368	2081	3/21/15	3/11/17	Scaffold	SC	SAMEA1023847	GCA_001126265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/265/GCA_001126265.1_6631_4_2	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38096	65.6	-	COPL01	102	4288	4097	3/22/15	3/11/17	Scaffold	SC	SAMEA1403677	GCA_001380415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/415/GCA_001380415.1_7755_2_36	-	0277C
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.13979	50.8	-	LRVR01	153	5394	5078	2/16/16	2/25/17	Contig	Swansea University	SAMN04273071	GCA_001561015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/015/GCA_001561015.1_ASM156101v1	-	1402
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.15773	52	-	MYVW01	853	5715	4973	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360081	GCA_002043635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/635/GCA_002043635.1_ASM204363v1	-	BCW_6278
Staphylococcus aureus subsp. aureus VRS7	1116220	PRJNA76985	76985	Terrabacteria group	Firmicutes	3.0891	32.8	-	AHBQ01	125	3326	3131	5/15/12	3/2/17	Contig	Broad Institute	SAMN02596788	GCA_000262935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/935/GCA_000262935.1_VRSA07_3	22617140	VRS7
Staphylococcus aureus subsp. aureus VRS8	1116221	PRJNA76987	76987	Terrabacteria group	Firmicutes	2.93269	32.8	-	AHBR01	79	3117	2903	5/15/12	3/2/17	Contig	Broad Institute	SAMN02596789	GCA_000262955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/955/GCA_000262955.1_VRSA08_2	22617140	VRS8
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.30483	52	-	MYVX01	108	5550	5230	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360080	GCA_002043665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/665/GCA_002043665.1_ASM204366v1	-	BCW_6277
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.16512	50.8	-	LRVO01	128	5404	5088	2/16/16	2/25/17	Contig	Swansea University	SAMN04273068	GCA_001561025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/025/GCA_001561025.1_ASM156102v1	-	1369
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36802	65.6	-	COOK01	103	4294	4083	3/23/15	3/11/17	Scaffold	SC	SAMEA1403678	GCA_001380435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/435/GCA_001380435.1_7314_8_80	-	1506N
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.08863	39.7	-	CPTC01	74	2301	2108	3/22/15	3/11/17	Scaffold	SC	SAMEA682403	GCA_001126305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/305/GCA_001126305.1_5366_6_8	-	08B08638
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.06096	39.6	-	CMBK01	61	2243	1989	3/21/15	3/11/17	Scaffold	SC	SAMEA1029070	GCA_001126345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/345/GCA_001126345.1_7004_6_48	-	SMRU2856
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36981	65.6	-	COPK01	88	4288	4101	3/22/15	3/11/17	Scaffold	SC	SAMEA1403679	GCA_001380455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/455/GCA_001380455.1_7755_2_35	-	0275A
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.41571	50.7	-	LRVP01	408	5728	5338	2/16/16	2/25/17	Contig	Swansea University	SAMN04273069	GCA_001561035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/035/GCA_001561035.1_ASM156103v1	-	1380
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.15081	52	-	MYVY01	1294	5868	4901	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360079	GCA_002043685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/685/GCA_002043685.1_ASM204368v1	-	BCW_6276
Staphylococcus aureus subsp. aureus VRS9	1116222	PRJNA76989	76989	Terrabacteria group	Firmicutes	2.91428	32.7	-	AHBS01	68	3071	2878	5/15/12	3/2/17	Contig	Broad Institute	SAMN02596790	GCA_000262975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/975/GCA_000262975.1_VRSA09_2	22617140	VRS9
Staphylococcus aureus subsp. aureus VRS10	1116223	PRJNA76991	76991	Terrabacteria group	Firmicutes	3.01328	32.8	-	AHBT01	65	3211	3034	5/15/12	3/2/17	Contig	Broad Institute	SAMN02596791	GCA_000262995.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/995/GCA_000262995.2_VRSA10_2	22617140	VRS10
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.0917	52	-	MYWA01	204	5326	4966	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360077	GCA_002043715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/715/GCA_002043715.1_ASM204371v1	-	BCW_6274
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.13315	50.7	-	LRVN01	105	5334	5032	2/16/16	2/25/17	Contig	Swansea University	SAMN04273067	GCA_001561045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/045/GCA_001561045.1_ASM156104v1	-	1366
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36401	65.6	-	COLC01	108	4280	4083	3/22/15	3/11/17	Scaffold	SC	SAMEA1403680	GCA_001380475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/475/GCA_001380475.1_7156_6_11	-	1565C
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05796	39.7	-	CLJA01	71	2243	2048	3/21/15	3/11/17	Scaffold	SC	SAMEA1028939	GCA_001126485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/485/GCA_001126485.1_6925_7_14	-	SMRU2510
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.17465	39.5	-	CPTR01	101	2407	2146	3/22/15	3/11/17	Scaffold	SC	SAMEA1020533	GCA_001126505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/505/GCA_001126505.1_6187_5_21	-	LMG867
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36073	65.6	-	COXV01	114	4287	4079	3/23/15	3/11/17	Scaffold	SC	SAMEA1403681	GCA_001380495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/495/GCA_001380495.1_7841_6_30	-	1852P
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.10704	50.8	-	LRVQ01	111	5329	5034	2/16/16	2/25/17	Contig	Swansea University	SAMN04273070	GCA_001561095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/095/GCA_001561095.1_ASM156109v1	-	1389
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.16711	52.1	-	MYWD01	153	5385	5070	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360074	GCA_002043725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/725/GCA_002043725.1_ASM204372v1	-	BCW_6271
Staphylococcus aureus subsp. aureus VRS11a	1116224	PRJNA76993	76993	Terrabacteria group	Firmicutes	2.9851	32.8	-	AHBU01	59	3167	2991	5/15/12	3/2/17	Contig	Broad Institute	SAMN02596792	GCA_000263015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/015/GCA_000263015.1_VRSA11a_2	22617140	VRS11a
Staphylococcus aureus subsp. aureus VRS11b	1116225	PRJNA76995	76995	Terrabacteria group	Firmicutes	2.98693	32.8	-	AHBV01	62	3162	2989	5/15/12	3/2/17	Contig	Broad Institute	SAMN02596793	GCA_000263035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/263/035/GCA_000263035.1_VRSA11b_2	22617140	VRS11b
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.97428	52	-	MYWH01	114	5098	4816	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360070	GCA_002043755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/755/GCA_002043755.1_ASM204375v1	-	BCW_6267
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.11814	50.8	-	LRVS01	152	5345	5009	2/16/16	2/25/17	Contig	Swansea University	SAMN04273072	GCA_001561105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/105/GCA_001561105.1_ASM156110v1	-	2963
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35879	65.6	-	CORD01	83	4272	4087	3/23/15	3/11/17	Scaffold	SC	SAMEA1403683	GCA_001380535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/535/GCA_001380535.1_7755_3_90	-	0585M
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05493	39.5	-	CMFH01	69	2276	2047	3/21/15	3/4/17	Scaffold	SC	SAMEA1028882	GCA_001126565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/565/GCA_001126565.1_7011_6_18	-	SMRU2826
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.18642	39.6	-	CPTN01	111	2403	2166	3/22/15	3/4/17	Scaffold	SC	SAMEA1408236	GCA_001126785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/785/GCA_001126785.1_7444_8_59	-	0203+19212
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36808	65.6	-	COMH01	105	4290	4078	3/23/15	3/11/17	Scaffold	SC	SAMEA1403684	GCA_001380555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/555/GCA_001380555.1_7156_6_39	-	0897B
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.20682	50.8	-	LRVX01	165	5484	5148	2/16/16	2/25/17	Contig	Swansea University	SAMN04273077	GCA_001561115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/115/GCA_001561115.1_ASM156111v1	-	3140
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.21381	52.1	-	MYWJ01	77	5431	5127	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360068	GCA_002043785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/785/GCA_002043785.1_ASM204378v1	-	BCW_6265
Staphylococcus aureus subsp. aureus str. Newbould 305	1182756	PRJNA162721	162721	Terrabacteria group	Firmicutes	2.79039	32.7961	plasmid pNewbould305:NZ_AKYW01000028.1/AKYW01000028.1	AKYW01	28	2898	2733	7/9/12	3/2/17	Contig	Geneva University Hospital	SAMN02471776	GCA_000276625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/276/625/GCA_000276625.1_Newbould305_assembly_v1	23105046	Newbould 305
Staphylococcus aureus subsp. aureus GR1	1144272	PRJNA82609	82609	Terrabacteria group	Firmicutes	2.80194	32.7	-	AJLX01	68	2915	2800	7/23/12	3/2/17	Contig	National Center for Biological Sciences	SAMN00991725	GCA_000280745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/280/745/GCA_000280745.1_S.aureus_GR1_1.0	23209210	GR1
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.99427	51.9	-	MYWB01	127	5156	4853	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360076	GCA_002043795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/795/GCA_002043795.1_ASM204379v1	-	BCW_6273
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.13563	50.7	-	LRVY01	93	5331	5023	2/16/16	2/25/17	Contig	Swansea University	SAMN04273088	GCA_001561135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/135/GCA_001561135.1_ASM156113v1	-	B3
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36809	65.6	-	COUA01	111	4291	4073	3/23/15	3/11/17	Scaffold	SC	SAMEA1403685	GCA_001380575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/575/GCA_001380575.1_7755_5_91	-	1048Q
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.37914	39.8	-	CLQJ01	264	2707	2312	3/21/15	3/4/17	Scaffold	SC	SAMEA1028975	GCA_001126825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/825/GCA_001126825.1_6949_4_14	-	SMRU2486
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.06219	39.6	-	CMMH01	56	2247	2000	3/23/15	3/4/17	Scaffold	SC	SAMEA1029420	GCA_001126905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/905/GCA_001126905.1_7068_4_10	-	SMRU3130
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36423	65.6	-	COXS01	122	4311	4080	3/23/15	3/11/17	Scaffold	SC	SAMEA1403687	GCA_001380595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/595/GCA_001380595.1_7841_6_29	-	1850M
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.20214	50.6	-	LRVT01	108	5400	5112	2/16/16	2/25/17	Contig	Swansea University	SAMN04273074	GCA_001561175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/175/GCA_001561175.1_ASM156117v1	-	3019
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.94272	52.1	-	MYUG01	67	5094	4772	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360199	GCA_002043815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/815/GCA_002043815.1_ASM204381v1	-	BCW_6620
Staphylococcus aureus subsp. aureus NN50	1112349	PRJDB9	165863	Terrabacteria group	Firmicutes	2.82224	32.7	-	BAEA01	65	2985	2824	5/9/12	3/2/17	Contig	Niigata University Graduate School ofMedical and Dental Sciences	SAMD00036595	GCA_000284895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/284/895/GCA_000284895.1_ASM28489v1	-	NN50 substr. aureus
Staphylococcus aureus M2	1233245	PRJNA175466	175466	Terrabacteria group	Firmicutes	2.90246	32.7	-	AMTC01	133	3042	2806	10/22/12	3/2/17	Contig	Institute for Genome Sciences	SAMN02435813	GCA_000307695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/307/695/GCA_000307695.1_ASM30769v1	23405318	M2
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.65172	52.3	-	MYUO01	66	4721	4487	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360189	GCA_002043845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/845/GCA_002043845.1_ASM204384v1	-	BCW_6526
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.13089	50.7	-	LRVU01	148	5337	5028	2/16/16	2/25/17	Contig	Swansea University	SAMN04273073	GCA_001561195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/195/GCA_001561195.1_ASM156119v1	-	2999
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36723	65.6	-	CORL01	110	4303	4085	3/22/15	3/11/17	Scaffold	SC	SAMEA1403688	GCA_001380615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/615/GCA_001380615.1_7755_4_13	-	0696H
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.16012	39.6	-	CKDS01	84	2372	2078	3/21/15	3/15/17	Scaffold	SC	SAMEA1023854	GCA_001126965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/965/GCA_001126965.1_6630_1_22	-	19A
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.96395	39.8	-	CKHM01	46	2173	1949	3/21/15	3/4/17	Scaffold	SC	SAMEA1023945	GCA_001127005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/005/GCA_001127005.1_6631_2_20	-	8
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36672	65.6	-	CORE01	117	4295	4076	3/23/15	3/11/17	Scaffold	SC	SAMEA1403690	GCA_001380635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/635/GCA_001380635.1_7755_3_91	-	0589R
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.078	50.8	-	LRVV01	126	5295	4969	2/16/16	2/25/17	Contig	Swansea University	SAMN04273075	GCA_001561205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/205/GCA_001561205.1_ASM156120v1	-	3020
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.22373	52	-	MYWI01	75	5446	5160	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360069	GCA_002043865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/865/GCA_002043865.1_ASM204386v1	-	BCW_6266
Staphylococcus aureus PM1	1147034	PRJDB50	170668	Terrabacteria group	Firmicutes	2.82765	32.8	-	BAFA01	90	2966	2777	7/10/12	3/2/17	Contig	Niigata University Graduate School of Medical and Dental Sciences	SAMD00036613	GCA_000308895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/895/GCA_000308895.1_ASM30889v1	-	PM1
Staphylococcus aureus NN54	1161392	PRJDB71	170669	Terrabacteria group	Firmicutes	2.88683	32.7	-	BAFI01	60	2994	2861	7/10/12	3/2/17	Contig	Niigata University Graduate School ofMedical and Dental Sciences	SAMD00036616	GCA_000308915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/308/915/GCA_000308915.1_ASM30891v1	-	NN54
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.58933	52.2	-	MYUQ01	42	4724	4339	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360187	GCA_002043885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/885/GCA_002043885.1_ASM204388v1	-	BCW_6524
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.07324	50.8	-	LRVW01	111	5285	4981	2/16/16	2/25/17	Contig	Swansea University	SAMN04273076	GCA_001561215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/215/GCA_001561215.1_ASM156121v1	-	3134
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36971	65.6	-	CONZ01	128	4295	4081	3/22/15	3/11/17	Scaffold	SC	SAMEA1403691	GCA_001380655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/655/GCA_001380655.1_7156_7_96	-	0041W
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11967	39.4	-	CLFH01	64	2319	2096	3/21/15	3/4/17	Scaffold	SC	SAMEA1025978	GCA_001127025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/025/GCA_001127025.1_6899_7_21	-	SMRU2109
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12221	39.6	-	CMKH01	59	2358	2111	3/23/15	3/11/17	Scaffold	SC	SAMEA1029329	GCA_001127165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/165/GCA_001127165.1_7054_4_19	-	SMRU3043
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37614	65.6	-	COMF01	90	4292	4095	3/23/15	3/11/17	Scaffold	SC	SAMEA1403692	GCA_001380675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/675/GCA_001380675.1_7156_6_40	-	0013Q
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.4311	50.6	-	LRVZ01	262	5737	5340	2/16/16	2/25/17	Contig	Swansea University	SAMN04273094	GCA_001561255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/255/GCA_001561255.1_ASM156125v1	-	B5
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.08441	51.9	-	MYUH01	85	5259	4994	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360198	GCA_002043895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/895/GCA_002043895.1_ASM204389v1	-	BCW_6614
Staphylococcus aureus CN79	1242970	PRJNA177559	177559	Terrabacteria group	Firmicutes	2.87668	32.7	-	ANCJ01	28	3006	2878	11/19/12	3/2/17	Contig	"Institute of Microbiology, Chinese Academy of Sciences"	SAMN02470786	GCA_000313595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/595/GCA_000313595.1_CN79v1	-	CN79
Staphylococcus aureus subsp. aureus 21282	904753	PRJNA53659	53659	Terrabacteria group	Firmicutes	2.82623	32.7	-	AMPF01	95	2997	2886	1/2/13	3/2/17	Contig	J. Craig Venter Institute	SAMN00116856	GCA_000330685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/685/GCA_000330685.1_Saureus21282v1.0	-	21282
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.93307	52.1	-	MYUI01	42	5090	4769	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360196	GCA_002043915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/915/GCA_002043915.1_ASM204391v1	-	BCW_6599
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.2715	50.7	-	LRWA01	194	5584	5207	2/16/16	2/25/17	Contig	Swansea University	SAMN04273085	GCA_001561275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/275/GCA_001561275.1_ASM156127v1	-	B16
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36757	65.6	-	COOB01	114	4298	4082	3/22/15	3/11/17	Scaffold	SC	SAMEA1403693	GCA_001380695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/695/GCA_001380695.1_7156_7_95	-	0026E
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14905	39.6	-	CKKQ01	104	2377	2135	3/21/15	3/11/17	Scaffold	SC	SAMEA1023815	GCA_001127225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/225/GCA_001127225.1_6631_7_14	-	14
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.117	39.4	-	CKJO01	70	2315	2079	3/21/15	3/11/17	Scaffold	SC	SAMEA1023839	GCA_001127265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/265/GCA_001127265.1_6631_5_21	-	19F
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37552	65.6	-	COPN01	101	4307	4110	3/23/15	3/11/17	Scaffold	SC	SAMEA1403694	GCA_001380715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/715/GCA_001380715.1_7755_2_38	-	0280F
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.20916	50.8	-	LRWL01	136	5484	5162	2/16/16	2/25/17	Contig	Swansea University	SAMN04273098	GCA_001561285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/285/GCA_001561285.1_ASM156128v1	-	B65
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.53998	52.3	-	MYUS01	71	4604	4342	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360185	GCA_002043945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/945/GCA_002043945.1_ASM204394v1	-	BCW_6505
Staphylococcus aureus subsp. aureus DSM 20231	1241616	PRJNA177203	177203	Terrabacteria group	Firmicutes	2.75632	32.8	-	AMYL01	16	2883	2752	1/2/13	3/5/17	Contig	Korea University	SAMN02470202	GCA_000330825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/825/GCA_000330825.2_SASA1.0	24628867	DSM 20231
Staphylococcus aureus subsp. aureus 21236	904739	PRJNA53631	53631	Terrabacteria group	Firmicutes	2.7452	32.7	-	ANAK01	67	2849	2723	1/22/13	3/2/17	Contig	J. Craig Venter Institute	SAMN00116855	GCA_000332665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/665/GCA_000332665.1_Saur21236v1.0	-	21236
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.64965	52.3	-	MYUP01	64	4718	4479	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360188	GCA_002043955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/955/GCA_002043955.1_ASM204395v1	-	BCW_6525
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.13064	50.8	-	LRWD01	196	5388	5034	2/16/16	2/25/17	Contig	Swansea University	SAMN04273089	GCA_001561295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/295/GCA_001561295.1_ASM156129v1	-	B37
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36857	65.6	-	CORC01	122	4299	4077	3/23/15	3/11/17	Scaffold	SC	SAMEA1403695	GCA_001380735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/735/GCA_001380735.1_7755_3_87	-	0543R
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11953	39.7	-	CLHC01	63	2365	2142	3/21/15	3/11/17	Scaffold	SC	SAMEA1025939	GCA_001127365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/365/GCA_001127365.1_6925_5_1	-	SMRU2161
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.19161	39.5	-	CKJZ01	46	2446	2206	3/21/15	3/11/17	Scaffold	SC	SAMEA1024192	GCA_001127465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/465/GCA_001127465.1_6631_6_12	-	23F
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3633	65.6	-	COLD01	121	4294	4078	3/23/15	3/11/17	Scaffold	SC	SAMEA1403696	GCA_001380755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/755/GCA_001380755.1_7156_6_14	-	1593H
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.1482	50.7	-	LRWC01	180	5395	5073	2/16/16	2/25/17	Contig	Swansea University	SAMN04273087	GCA_001561335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/335/GCA_001561335.1_ASM156133v1	-	B26
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.82216	52.1	-	MYUZ01	58	4939	4681	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360105	GCA_002044005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/005/GCA_002044005.1_ASM204400v1	-	BCW_6302
Staphylococcus aureus subsp. aureus 21196	904729	PRJNA53611	53611	Terrabacteria group	Firmicutes	2.79932	32.7	-	ANAL01	78	2922	2769	1/22/13	3/2/17	Contig	J. Craig Venter Institute	SAMN02436572	GCA_000332685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/332/685/GCA_000332685.1_Saur21196v1.0	-	21196
Staphylococcus aureus subsp. aureus 333	1221452	PRJNA172414	172414	Terrabacteria group	Firmicutes	2.76132	32.7	-	ALWF01	54	2872	2713	2/1/13	3/2/17	Contig	National Center for Biological Sciences	SAMN01923431	GCA_000336275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/275/GCA_000336275.1_S.aureus_333	23544121	333
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.91484	52	-	MYVA01	87	5034	4758	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360104	GCA_002044025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/025/GCA_002044025.1_ASM204402v1	-	BCW_6301
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	4.96439	50.7	-	LRWB01	183	5126	4802	2/16/16	2/25/17	Contig	Swansea University	SAMN04273086	GCA_001561355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/355/GCA_001561355.1_ASM156135v1	-	B22
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36364	65.6	-	COXY01	130	4302	4077	3/23/15	3/11/17	Scaffold	SC	SAMEA1403697	GCA_001380775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/775/GCA_001380775.1_7841_6_33	-	1858W
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.02857	39.7	-	CRMF01	73	2255	2045	3/22/15	3/11/17	Scaffold	SC	SAMEA1024607	GCA_001127525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/525/GCA_001127525.1_6755_2_21	-	SMRU813
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.07353	39.5	-	CPNO01	72	2260	2042	3/22/15	3/11/17	Scaffold	SC	SAMEA1020099	GCA_001127585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/585/GCA_001127585.1_6259_4_14	-	ERS069030
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.365	65.6	-	COXU01	121	4306	4084	3/22/15	3/11/17	Scaffold	SC	SAMEA1403699	GCA_001380815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/815/GCA_001380815.1_7841_6_32	-	1854R
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	4.99189	50.8	-	LRWF01	112	5180	4871	2/16/16	2/25/17	Contig	Swansea University	SAMN04273091	GCA_001561365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/365/GCA_001561365.1_ASM156136v1	-	B46
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.61344	52.3	-	MYVE01	38	4695	4448	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360100	GCA_002044035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/035/GCA_002044035.1_ASM204403v1	-	BCW_6297
Staphylococcus aureus subsp. aureus VH60	1226740	PRJNA172415	172415	Terrabacteria group	Firmicutes	2.76993	32.7	-	ALWG01	44	2858	2719	2/1/13	3/2/17	Contig	National Center for Biological Sciences	SAMN01923428	GCA_000336295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/295/GCA_000336295.1_S.aureus_60	-	VH60
Staphylococcus aureus subsp. aureus 3989	1221453	PRJNA172419	172419	Terrabacteria group	Firmicutes	2.76365	32.7	-	ALWH01	43	2849	2707	2/1/13	3/2/17	Contig	National Center for Biological Sciences	SAMN01906555	GCA_000336315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/315/GCA_000336315.1_S.aureus_3989	23544121	3989
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.31169	52	-	MYVN01	938	6028	5150	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360090	GCA_002044065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/065/GCA_002044065.1_ASM204406v1	-	BCW_6287
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.21017	50.6	-	LRWE01	100	5466	5166	2/16/16	2/25/17	Contig	Swansea University	SAMN04273090	GCA_001561375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/375/GCA_001561375.1_ASM156137v1	-	B44
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38721	65.6	-	COTX01	105	4309	4107	3/22/15	3/11/17	Scaffold	SC	SAMEA1403700	GCA_001380835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/835/GCA_001380835.1_7755_5_88	-	1011A
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.07497	39.6	-	CLJR01	64	2256	2007	3/21/15	3/11/17	Scaffold	SC	SAMEA1029138	GCA_001127745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/745/GCA_001127745.1_6925_8_16	-	SMRU2536
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.00405	39.7	-	CKET01	78	2213	1992	3/21/15	3/11/17	Scaffold	SC	SAMEA1024097	GCA_001127765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/765/GCA_001127765.1_6630_2_21	-	15A
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36859	65.6	-	CORK01	93	4284	4095	3/23/15	3/11/17	Scaffold	SC	SAMEA1403701	GCA_001380855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/855/GCA_001380855.1_7755_4_12	-	0691C
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.13913	50.8	-	LRWG01	258	5359	5023	2/16/16	2/25/17	Contig	Swansea University	SAMN04273092	GCA_001561415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/415/GCA_001561415.1_ASM156141v1	-	B47
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.29919	52	-	MYVF01	66	5559	5248	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360099	GCA_002044075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/075/GCA_002044075.1_ASM204407v1	-	BCW_6296
Staphylococcus aureus subsp. aureus 120	1221451	PRJNA172413	172413	Terrabacteria group	Firmicutes	2.77648	32.7	-	ALWE01	56	2861	2721	2/1/13	3/2/17	Contig	National Center for Biological Sciences	SAMN01110267	GCA_000336335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/335/GCA_000336335.1_S.aureus_120	23544121	120
Staphylococcus aureus KT/314250	1231383	PRJNA174844	174844	Terrabacteria group	Firmicutes	2.84605	32.7	-	AOCP01	69	2991	2834	2/4/13	3/2/17	Contig	Universiti Sultan Zainal Abidin	SAMN02471422	GCA_000336515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/515/GCA_000336515.1_KT3Sta1.0	-	KT/314250
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.85472	52.2	-	MYVH01	85	4966	4693	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360096	GCA_002044105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/105/GCA_002044105.1_ASM204410v1	-	BCW_6293
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.18806	50.6	-	LRWH01	166	5415	5094	2/16/16	2/25/17	Contig	Swansea University	SAMN04273093	GCA_001561435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/435/GCA_001561435.1_ASM156143v1	-	B48
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36834	65.6	-	COLF01	94	4288	4097	3/23/15	3/11/17	Scaffold	SC	SAMEA1403702	GCA_001380875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/875/GCA_001380875.1_7156_6_13	-	1592G
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.0953	39.7	-	CKVT01	48	2271	2007	3/21/15	3/11/17	Scaffold	SC	SAMEA1025956	GCA_001127785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/785/GCA_001127785.1_6823_4_5	-	SMRU1925
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99151	39.8	-	CQQH01	42	2209	1985	3/23/15	3/11/17	Scaffold	SC	SAMEA970299	GCA_001127985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/985/GCA_001127985.1_5159_5_12	-	BHN341
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36459	65.6	-	CHXW01	116	4291	4070	4/21/15	3/11/17	Scaffold	SC	SAMEA1403703	GCA_001380895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/895/GCA_001380895.1_7755_3_88	-	0556F
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.02764	50.7	-	LRWI01	78	5185	4895	2/16/16	2/25/17	Contig	Swansea University	SAMN04273095	GCA_001561445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/445/GCA_001561445.1_ASM156144v1	-	B51
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.09947	52.1	-	MYVT01	433	5468	4950	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360084	GCA_002044125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/125/GCA_002044125.1_ASM204412v1	-	BCW_6281
Staphylococcus aureus KT/Y21	1231382	PRJNA174843	174843	Terrabacteria group	Firmicutes	2.76347	32.7	-	AOCQ01	70	2848	2716	2/4/13	3/2/17	Contig	Universiti Sultan Zainal Abidin	SAMN02471423	GCA_000336595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/595/GCA_000336595.1_KTY21Sta1.0	24723714	KT/Y21
Staphylococcus aureus KLT6	1283278	PRJNA186656	186656	Terrabacteria group	Firmicutes	2.70018	32.8	-	APFH01	29	2761	2583	4/2/13	3/5/17	Contig	"ohnosequences! research group, Era7 Bioinformatics"	SAMN02472075	GCA_000350425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/350/425/GCA_000350425.2_KLT6	23704175	KLT6
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.96209	52.1	-	MYWC01	74	5081	4802	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360075	GCA_002044165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/165/GCA_002044165.1_ASM204416v1	-	BCW_6272
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.15672	50.6	-	LRWJ01	124	5372	5048	2/16/16	2/25/17	Contig	Swansea University	SAMN04273096	GCA_001561455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/455/GCA_001561455.1_ASM156145v1	-	B54
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36501	65.6	-	CONW01	105	4282	4080	3/23/15	3/11/17	Scaffold	SC	SAMEA1403704	GCA_001380915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/915/GCA_001380915.1_7156_7_94	-	1450C
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.08314	39.6	-	CKBT01	69	2275	2049	3/21/15	3/11/17	Scaffold	SC	SAMEA974664	GCA_001128005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/005/GCA_001128005.1_6259_8_22	-	14
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.13775	39.5	-	CLND01	65	2367	2108	3/21/15	3/11/17	Scaffold	SC	SAMEA1029131	GCA_001128085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/085/GCA_001128085.1_6938_8_12	-	SMRU2724
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36813	65.6	-	COXW01	117	4289	4076	3/23/15	3/11/17	Scaffold	SC	SAMEA1403705	GCA_001380935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/935/GCA_001380935.1_7841_6_31	-	1853Q
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.25935	50.7	-	LRWK01	177	5518	5152	2/16/16	2/25/17	Contig	Swansea University	SAMN04273097	GCA_001561495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/495/GCA_001561495.1_ASM156149v1	-	B58
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.91336	52	-	MYVR01	89	5023	4754	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360086	GCA_002044195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/195/GCA_002044195.1_ASM204419v1	-	BCW_6283
Staphylococcus aureus HI010B	1156997	PRJNA88551	88551	Terrabacteria group	Firmicutes	2.88954	32.7	-	AIVJ01	23	3055	2901	4/9/13	3/2/17	Contig	Broad Institute	SAMN00792159	GCA_000359665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/359/665/GCA_000359665.1_Stap_aure_HI010B_V1	-	HI010B
Staphylococcus aureus LVP5	1278075	PRJNA185256	185256	Terrabacteria group	Firmicutes	2.75766	32.8	-	AOFW01	29	2895	2745	4/12/13	3/2/17	Contig	National Center for Biological Sciences	SAMN01906554	GCA_000364465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/465/GCA_000364465.1_S.aureus_LVP5	-	LVP5
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.79014	52.2	-	MYWE01	95	4855	4617	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360073	GCA_002044225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/225/GCA_002044225.1_ASM204422v1	-	BCW_6270
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.16872	50.8	-	LRXB01	282	5427	5094	2/16/16	2/25/17	Contig	Swansea University	SAMN04273108	GCA_001561505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/505/GCA_001561505.1_ASM156150v1	-	E4
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36395	65.6	-	CORJ01	103	4288	4083	3/23/15	3/11/17	Scaffold	SC	SAMEA1403706	GCA_001380955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/955/GCA_001380955.1_7755_4_11	-	0672G
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08326	39.5	-	CMDE01	76	2290	2065	3/21/15	3/4/17	Scaffold	SC	SAMEA1028764	GCA_001128145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/145/GCA_001128145.1_7011_3_11	-	SMRU2747
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.01904	39.7	-	CLQU01	47	2228	1996	3/21/15	3/4/17	Scaffold	SC	SAMEA1029048	GCA_001128225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/225/GCA_001128225.1_6949_4_8	-	SMRU2480
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3654	65.6	-	COTY01	117	4301	4080	3/23/15	3/11/17	Scaffold	SC	SAMEA1403707	GCA_001380975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/975/GCA_001380975.1_7755_5_89	-	1016F
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.29872	50.7	-	LRWS01	188	5550	5211	2/16/16	2/25/17	Contig	Swansea University	SAMN04273106	GCA_001561515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/515/GCA_001561515.1_ASM156151v1	-	B94
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.23552	52.1	-	MYWF01	76	5438	5120	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360072	GCA_002044245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/245/GCA_002044245.1_ASM204424v1	-	BCW_6269
Staphylococcus aureus VH221	1278074	PRJNA185257	185257	Terrabacteria group	Firmicutes	2.74852	32.7	-	AOFX01	111	2891	2731	4/12/13	3/2/17	Contig	National Center for Biological Sciences	SAMN01923432	GCA_000364485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/485/GCA_000364485.1_S.aureus_VH221	-	VH221
Staphylococcus aureus 3957	1278071	PRJNA185253	185253	Terrabacteria group	Firmicutes	2.80817	32.7	-	AOFU01	43	2920	2776	4/12/13	3/2/17	Contig	National Center for Biological Sciences	SAMN01923433	GCA_000364505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/505/GCA_000364505.1_S.aureus_3957	-	3957
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.2019	52.1	-	MYWG01	300	5512	5099	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360071	GCA_002044255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/255/GCA_002044255.1_ASM204425v1	-	BCW_6268
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.18333	50.7	-	LRWM01	142	5419	5094	2/16/16	2/25/17	Contig	Swansea University	SAMN04273099	GCA_001561555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/555/GCA_001561555.1_ASM156155v1	-	B71
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36951	65.6	-	COOL01	105	4284	4088	3/23/15	3/11/17	Scaffold	SC	SAMEA1403708	GCA_001380995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/380/995/GCA_001380995.1_7314_8_83	-	1545F
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10679	39.5	-	CKNP01	49	2335	2110	3/21/15	3/4/17	Scaffold	SC	SAMEA1023848	GCA_001128245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/245/GCA_001128245.1_6664_1_15	-	23F
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.18021	39.5	-	CLUU01	53	2435	2177	3/21/15	3/4/17	Scaffold	SC	SAMEA1025736	GCA_001128285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/285/GCA_001128285.1_6983_2_3	-	SMRU2211
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35962	65.6	-	COWQ01	111	4299	4095	3/23/15	3/11/17	Scaffold	SC	SAMEA1403714	GCA_001381055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/055/GCA_001381055.1_7769_8_77	-	1712M
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	4.86468	50.8	-	LRWQ01	162	5054	4720	2/16/16	2/25/17	Contig	Swansea University	SAMN04273103	GCA_001561575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/575/GCA_001561575.1_ASM156157v1	-	B87
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.8536	52.2	-	MYWK01	77	4966	4693	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360066	GCA_002044265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/265/GCA_002044265.1_ASM204426v1	-	BCW_6263
Staphylococcus aureus LVP2	1278072	PRJNA185254	185254	Terrabacteria group	Firmicutes	2.86079	32.7	-	AOFV01	73	3009	2849	4/12/13	3/2/17	Contig	National Center for Biological Sciences	SAMN01906553	GCA_000364525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/364/525/GCA_000364525.1_S.aureus_LVP2	-	LVP2
Staphylococcus aureus subsp. aureus 06BA18369	1216363	PRJNA170654	170654	Terrabacteria group	Firmicutes	2.86576	32.7	-	ARXY01	59	3025	2869	5/10/13	3/2/17	Contig	Northern Antibiotic Resistance Partnership	SAMN02470878	GCA_000390205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/390/205/GCA_000390205.1_MSSA1.0	23814031	06BA18369
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.65555	52.3	-	MYWO01	66	4718	4492	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360062	GCA_002044305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/305/GCA_002044305.1_ASM204430v1	-	BCW_6259
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.30795	50.7	-	LRWN01	200	5582	5225	2/16/16	2/25/17	Contig	Swansea University	SAMN04273100	GCA_001561595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/595/GCA_001561595.1_ASM156159v1	-	B75
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37526	65.6	-	COPM01	118	4312	4083	3/23/15	3/11/17	Scaffold	SC	SAMEA1403715	GCA_001381075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/075/GCA_001381075.1_7755_2_40	-	0282H
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.2199	39.4	-	CMCJ01	84	2450	2193	3/21/15	3/4/17	Scaffold	SC	SAMEA1029342	GCA_001128345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/345/GCA_001128345.1_7004_8_78	-	SMRU2910
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.09275	39.6	-	CPTA01	120	2245	2071	3/23/15	3/4/17	Scaffold	SC	SAMEA770064	GCA_001128465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/465/GCA_001128465.1_5192_8_3	-	7B/2
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36686	65.6	-	COPT01	107	4291	4072	3/22/15	3/11/17	Scaffold	SC	SAMEA1403716	GCA_001381095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/095/GCA_001381095.1_7755_2_42	-	0293V
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.35213	50.6	-	LRWR01	216	5637	5252	2/16/16	2/25/17	Contig	Swansea University	SAMN04273104	GCA_001561605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/605/GCA_001561605.1_ASM156160v1	-	B89
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.8487	52.2	-	MYWL01	253	5052	4678	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360065	GCA_002044325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/325/GCA_002044325.1_ASM204432v1	-	BCW_6262
Staphylococcus aureus subsp. aureus 091751	1137129	PRJNA81813	81813	Terrabacteria group	Firmicutes	2.82451	32.6	-	AHZH01	132	2987	2837	5/24/13	3/2/17	Contig	Novartis Vaccines and Diagnostics	SAMN02470727	GCA_000401435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/435/GCA_000401435.1_ASM40143v1	-	91751
Staphylococcus aureus subsp. aureus 122051	1137131	PRJNA81829	81829	Terrabacteria group	Firmicutes	2.74539	32.6	-	AHZJ01	140	2822	2678	5/24/13	3/2/17	Contig	Novartis Vaccines and Diagnostics	SAMN02470734	GCA_000401455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/455/GCA_000401455.1_ASM40145v1	-	122051
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80037	52.2	-	MYWN01	69	4860	4598	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360063	GCA_002044345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/345/GCA_002044345.1_ASM204434v1	-	BCW_6260
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	4.6603	50.8	-	LRWP01	238	4734	4482	2/16/16	2/25/17	Contig	Swansea University	SAMN04273102	GCA_001561635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/635/GCA_001561635.1_ASM156163v1	-	B83
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36734	65.6	-	COON01	86	4292	4083	3/22/15	3/11/17	Scaffold	SC	SAMEA1403718	GCA_001381135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/135/GCA_001381135.1_7314_8_86	-	1723Z
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.17775	39.5	-	CLJZ01	59	2418	2175	3/21/15	3/4/17	Scaffold	SC	SAMEA1028716	GCA_001128485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/485/GCA_001128485.1_6925_8_22	-	SMRU2542
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.07979	39.7	-	CPLI01	90	2288	2087	3/23/15	3/4/17	Scaffold	SC	SAMEA682276	GCA_001128505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/505/GCA_001128505.1_5429_8_4	-	09B09045
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.40243	65.6	-	COPO01	103	4314	4105	3/23/15	3/11/17	Scaffold	SC	SAMEA1403719	GCA_001381155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/155/GCA_001381155.1_7755_2_41	-	0290R
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.29796	50.7	-	LRWO01	187	5561	5221	2/16/16	2/25/17	Contig	Swansea University	SAMN04273101	GCA_001561655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/655/GCA_001561655.1_ASM156165v1	-	B77
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.19644	51.9	-	MYWP01	842	5338	4940	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360061	GCA_002044355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/355/GCA_002044355.1_ASM204435v1	-	BCW_6258
Staphylococcus aureus subsp. aureus MRGR3	1137133	PRJNA81835	81835	Terrabacteria group	Firmicutes	3.00333	32.6	-	AHZL01	112	3159	3053	5/24/13	3/2/17	Contig	Novartis Vaccines and Diagnostics	SAMN02470733	GCA_000401475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/475/GCA_000401475.1_ASM40147v1	-	MRGR3
Staphylococcus aureus subsp. aureus 103564	1137130	PRJNA81827	81827	Terrabacteria group	Firmicutes	2.75637	32.7	-	AHZI01	142	2863	2721	5/24/13	3/2/17	Contig	Novartis Vaccines and Diagnostics	SAMN02470726	GCA_000401575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/575/GCA_000401575.1_ASM40157v1	-	103564
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66117	52.3	-	MYWQ01	51	4714	4500	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360060	GCA_002044385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/385/GCA_002044385.1_ASM204438v1	-	BCW_6257
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	4.5767	50.3	-	LRWW01	52	4567	4294	2/16/16	2/25/17	Contig	Swansea University	SAMN04273080	GCA_001561675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/675/GCA_001561675.1_ASM156167v1	-	B116
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36728	65.6	-	COVT01	120	4304	4089	3/23/15	3/11/17	Scaffold	SC	SAMEA1403720	GCA_001381175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/175/GCA_001381175.1_7769_8_50	-	1513W
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08967	39.7	-	CRRG01	56	2273	2053	3/22/15	3/4/17	Scaffold	SC	SAMEA1024982	GCA_001128645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/645/GCA_001128645.1_6805_1_15	-	SMRU1023
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14237	39.6	-	CKQB01	62	2363	2098	3/21/15	3/11/17	Scaffold	SC	SAMEA1024736	GCA_001128705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/705/GCA_001128705.1_6680_5_6	-	SMRU918
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38255	65.6	-	CORB01	105	4310	4106	3/23/15	3/11/17	Scaffold	SC	SAMEA1403721	GCA_001381195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/195/GCA_001381195.1_7755_3_86	-	0536J
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.20877	50.7	-	LRWT01	152	5491	5139	2/16/16	2/25/17	Contig	Swansea University	SAMN04273107	GCA_001561685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/685/GCA_001561685.1_ASM156168v1	-	B95
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.49566	51.4	-	MYWV01	155	4550	4077	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360055	GCA_002044405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/405/GCA_002044405.1_ASM204440v1	-	BCW_6252
Staphylococcus aureus subsp. aureus 112808A	1137132	PRJNA81831	81831	Terrabacteria group	Firmicutes	2.77292	32.8	-	AHZK01	78	2856	2716	5/24/13	3/2/17	Contig	Novartis Vaccines and Diagnostics	SAMN02470730	GCA_000401595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/401/595/GCA_000401595.1_ASM40159v1	-	112808A
Staphylococcus aureus subsp. aureus CBD-635	1331008	PRJNA200631	200631	Terrabacteria group	Firmicutes	2.81868	32.7	-	ASHS01	86	2925	2805	5/29/13	3/2/17	Contig	University of South Florida	SAMN02471941	GCA_000403115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/115/GCA_000403115.1_CBD-635	23846279	CBD-635
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.49604	51.4	-	MYWW01	107	4533	4081	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360054	GCA_002044425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/425/GCA_002044425.1_ASM204442v1	-	BCW_6251
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.12475	50.6	-	LRWY01	95	5292	4980	2/16/16	2/25/17	Contig	Swansea University	SAMN04273082	GCA_001561705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/705/GCA_001561705.1_ASM156170v1	-	B132
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38402	65.6	-	COXP01	113	4314	4106	3/22/15	3/11/17	Scaffold	SC	SAMEA1403722	GCA_001381215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/215/GCA_001381215.1_7841_6_24	-	1832S
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.10051	39.7	-	CLKM01	66	2279	2033	3/21/15	3/11/17	Scaffold	SC	SAMEA1029265	GCA_001128785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/785/GCA_001128785.1_6938_3_24	-	SMRU3149
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.02505	39.7	-	CKJH01	49	2261	2032	3/21/15	3/11/17	Scaffold	SC	SAMEA1023696	GCA_001128845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/845/GCA_001128845.1_6631_5_12	-	15A
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36532	65.6	-	COWR01	125	4306	4090	3/23/15	3/11/17	Scaffold	SC	SAMEA1403723	GCA_001381235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/235/GCA_001381235.1_7769_8_78	-	1717S
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.44389	50.6	-	LRWV01	292	5746	5345	2/16/16	2/25/17	Contig	Swansea University	SAMN04273079	GCA_001561735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/735/GCA_001561735.1_ASM156173v1	-	B107
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.57167	52.2	-	MYWX01	49	4645	4398	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360053	GCA_002044435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/435/GCA_002044435.1_ASM204443v1	-	BCW_6250
Staphylococcus aureus subsp. aureus S1800	1288493	PRJEB1369	203135	Terrabacteria group	Firmicutes	2.73839	32.8	-	CAWB01	401	2804	2689	5/24/13	3/2/17	Contig	UMCU	SAMEA2272764	GCA_000403685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/403/685/GCA_000403685.1_S1800D1	-	S1800
Staphylococcus aureus subsp. aureus H29	1258575	PRJNA179361	179361	Terrabacteria group	Firmicutes	2.84431	32.8	-	ANHW01	118	2966	2820	6/5/13	3/2/17	Contig	Oklahoma State University	SAMN02470764	GCA_000409145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/145/GCA_000409145.1_Staph-aureus_H29_.fna	-	H29
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.59339	52.2	-	MYWY01	741	4969	4307	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360051	GCA_002044445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/445/GCA_002044445.1_ASM204444v1	-	BCW_6248
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.34002	50.7	-	LRWU01	171	5651	5293	2/16/16	2/25/17	Contig	Swansea University	SAMN04273078	GCA_001561755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/755/GCA_001561755.1_ASM156175v1	-	B104
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35523	65.6	-	COOO01	120	4278	4074	3/23/15	3/11/17	Scaffold	SC	SAMEA1403726	GCA_001381255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/255/GCA_001381255.1_7314_8_87	-	0075H
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99021	39.8	-	CQQS01	43	2211	2004	3/23/15	3/11/17	Scaffold	SC	SAMEA970270	GCA_001128905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/905/GCA_001128905.1_5159_6_12	-	BHN625
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09466	39.7	-	CLHQ01	56	2324	2093	3/21/15	3/10/17	Scaffold	SC	SAMEA1025891	GCA_001128925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/925/GCA_001128925.1_6925_5_19	-	SMRU2179
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37103	65.6	-	COPV01	106	4291	4081	3/23/15	3/11/17	Scaffold	SC	SAMEA1403728	GCA_001381275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/275/GCA_001381275.1_7755_2_43	-	0296Y
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.34279	50.7	-	LRXA01	212	5624	5274	2/16/16	2/25/17	Contig	Swansea University	SAMN04273084	GCA_001561765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/765/GCA_001561765.1_ASM156176v1	-	B150
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.57279	52.2	-	MYWZ01	50	4648	4404	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360050	GCA_002044455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/455/GCA_002044455.1_ASM204445v1	-	BCW_6247
Staphylococcus aureus subsp. aureus PB32	1265302	PRJNA179544	179544	Terrabacteria group	Firmicutes	2.80852	32.7	-	ANIB01	80	2918	2745	6/5/13	3/2/17	Contig	Oklahoma State University	SAMN02470765	GCA_000409165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/409/165/GCA_000409165.1_Staph-aureus_PB32_.fna	-	PB32
Staphylococcus aureus SA_ST125_MupR	1334631	PRJNA203246	203246	Terrabacteria group	Firmicutes	2.85113	32.7	-	ASTH01	42	2970	2828	7/10/13	3/2/17	Contig	Servicio de Microbiologia Hospital Universitario 12 de Octubre	SAMN02146299	GCA_000421995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/421/995/GCA_000421995.1_ASM42199v1	23929481	SA_ST125_MupR
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.81315	52.1	-	MYXD01	58	4903	4646	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360045	GCA_002044505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/505/GCA_002044505.1_ASM204450v1	-	BCW_6241
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.19046	50.7	-	LRWX01	149	5464	5130	2/16/16	2/25/17	Contig	Swansea University	SAMN04273081	GCA_001561785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/785/GCA_001561785.1_ASM156178v1	-	B125
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36431	65.6	-	COWM01	112	4287	4084	3/23/15	3/11/17	Scaffold	SC	SAMEA1403729	GCA_001381295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/295/GCA_001381295.1_7769_8_75	-	1710K
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.0334	39.7	-	CPRM01	52	2216	2019	3/22/15	3/11/17	Scaffold	SC	SAMEA682537	GCA_001129005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/005/GCA_001129005.1_5429_8_10	-	09B09641
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.06939	39.8	-	CPLP01	159	2209	2046	3/22/15	3/10/17	Scaffold	SC	SAMEA682347	GCA_001129045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/045/GCA_001129045.1_5381_1_2	-	09B01717
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36784	65.6	-	CORM01	122	4303	4081	3/22/15	3/11/17	Scaffold	SC	SAMEA1403732	GCA_001381355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/355/GCA_001381355.1_7755_4_15	-	0701N
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.30832	50.7	-	LRWZ01	193	5570	5219	2/16/16	2/25/17	Contig	Swansea University	SAMN04273083	GCA_001561815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/815/GCA_001561815.1_ASM156181v1	-	B133
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.14707	52	-	MYXL01	137	5341	5042	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360037	GCA_002044525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/525/GCA_002044525.1_ASM204452v1	-	BCW_6233
Staphylococcus aureus SA16	1336252	PRJNA204980	204980	Terrabacteria group	Firmicutes	2.96156	32.9	-	ASZO01	74	3111	2930	7/31/13	3/2/17	Contig	University of Sao Paulo	SAMN02179359	GCA_000442355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/355/GCA_000442355.1_SA16_genome_assembly	24051324	SA16
Staphylococcus aureus S100	1344580	PRJNA207814	207814	Terrabacteria group	Firmicutes	2.74274	32.8	-	AUPV01	43	2855	2682	8/2/13	3/2/17	Contig	"Geneva University Hospitals, Genomic Research Laboratory."	SAMN02469810	GCA_000443125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/125/GCA_000443125.1_S100v1	23770143	S100
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.81535	52	-	MYXG01	70	4892	4649	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360042	GCA_002044555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/555/GCA_002044555.1_ASM204455v1	-	BCW_6238
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.21165	50.6	-	LRXC01	149	5502	5165	2/16/16	2/25/17	Contig	Swansea University	SAMN04273109	GCA_001561835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/835/GCA_001561835.1_ASM156183v1	-	F11
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.4558	65.6	-	COSO01	100	4380	4164	3/23/15	3/11/17	Scaffold	SC	SAMEA1403734	GCA_001381375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/375/GCA_001381375.1_7755_4_46	-	0788H
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09441	39.6	-	CLHD01	59	2292	2043	3/21/15	3/11/17	Scaffold	SC	SAMEA1026181	GCA_001129065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/065/GCA_001129065.1_6925_4_9	-	SMRU2145
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.1495	39.6	-	CKMP01	42	2345	2113	3/21/15	3/11/17	Scaffold	SC	SAMEA1024202	GCA_001129185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/185/GCA_001129185.1_6649_8_10	-	6B
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37841	65.6	-	COWP01	101	4306	4105	3/23/15	3/11/17	Scaffold	SC	SAMEA1403737	GCA_001381395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/395/GCA_001381395.1_7769_8_76	-	1711L
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.09372	50.7	-	LRXD01	145	5350	5015	2/16/16	2/25/17	Contig	Swansea University	SAMN04273110	GCA_001561845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/845/GCA_001561845.1_ASM156184v1	-	F283
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.77962	52.1	-	MYXI01	95	4871	4600	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360040	GCA_002044565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/565/GCA_002044565.1_ASM204456v1	-	BCW_6236
Staphylococcus aureus S130	1344578	PRJNA207811	207811	Terrabacteria group	Firmicutes	2.78361	32.8974	plasmid pS130a:NZ_AUPT01000023.1/AUPT01000023.1	AUPT01	42	2903	2725	8/2/13	3/2/17	Contig	"Geneva University Hospitals, Genomic Research Laboratory."	SAMN02469812	GCA_000443245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/245/GCA_000443245.1_S130v1	23770143	S130
Staphylococcus aureus S123	1344579	PRJNA207812	207812	Terrabacteria group	Firmicutes	2.7008	32.783	plasmid pS123a:NZ_AUPU01000021.1/AUPU01000021.1; plasmid pS123b:NZ_AUPU01000024.1/AUPU01000024.1	AUPU01	49	2774	2602	8/2/13	3/2/17	Contig	"Geneva University Hospitals, Genomic Research Laboratory."	SAMN02469811	GCA_000443265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/265/GCA_000443265.1_S123v1	23770143	S123
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.13697	52	-	MYXN01	84	5332	5036	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360033	GCA_002044605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/605/GCA_002044605.1_ASM204460v1	-	BCW_6229
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.29105	50.7	-	LRXE01	191	5526	5178	2/16/16	2/25/17	Contig	Swansea University	SAMN04273111	GCA_001561865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/865/GCA_001561865.1_ASM156186v1	-	HP47
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37203	65.6	-	COZP01	117	4311	4088	3/23/15	3/11/17	Scaffold	SC	SAMEA1403740	GCA_001381455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/455/GCA_001381455.1_7841_7_95	-	2080M
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15388	39.5	-	CKOF01	67	2388	2145	3/21/15	3/11/17	Scaffold	SC	SAMEA1024182	GCA_001129265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/265/GCA_001129265.1_6673_8_16	-	SMRU256
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.24341	39.5	-	CLEX01	99	2486	2245	3/21/15	3/11/17	Scaffold	SC	SAMEA1025970	GCA_001129285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/285/GCA_001129285.1_6899_7_11	-	SMRU2099
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38335	65.6	-	COSM01	94	4288	4110	3/23/15	3/11/17	Scaffold	SC	SAMEA1403741	GCA_001381475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/475/GCA_001381475.1_7755_4_44	-	0786F
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.11046	50.8	-	LRXF01	164	5372	5032	2/16/16	2/25/17	Contig	Swansea University	SAMN04273112	GCA_001561895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/561/895/GCA_001561895.1_ASM156189v1	-	HS115
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.26512	52	-	MYXR01	84	5532	5219	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360029	GCA_002044625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/625/GCA_002044625.1_ASM204462v1	-	BCW_6225
Staphylococcus aureus S94	1344581	PRJNA207815	207815	Terrabacteria group	Firmicutes	2.68514	32.7929	plasmid pS94a:NZ_AUPW01000021.1/AUPW01000021.1	AUPW01	54	2775	2603	8/2/13	3/2/17	Contig	"Geneva University Hospitals, Genomic Research Laboratory."	SAMN02469813	GCA_000443285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/443/285/GCA_000443285.1_S94v1	23770143	S94
Staphylococcus aureus S1	1344577	PRJNA207810	207810	Terrabacteria group	Firmicutes	2.8109	32.9013	plasmid pS1b:NZ_AUPS01000028.1/AUPS01000028.1; plasmid pS1c:NZ_AUPS01000031.1/AUPS01000031.1; plasmid pS1d:NZ_AUPS01000033.1/AUPS01000033.1; plasmid pS1e:NZ_AUPS01000034.1/AUPS01000034.1	AUPS01	59	2922	2741	8/28/13	3/5/17	Contig	"Geneva University Hospitals, Genomic Research Laboratory."	SAMN02469814	GCA_000455725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/455/725/GCA_000455725.2_S1v1	23770143	S1
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.1374	52	-	MYXM01	71	5325	5032	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360036	GCA_002044645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/645/GCA_002044645.1_ASM204464v1	-	BCW_6232
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.62549	50.4	-	LPTV01	291	6239	5728	2/24/16	2/25/17	Contig	FDA/CFSAN	SAMN04338509	GCA_001571485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/485/GCA_001571485.1_ASM157148v1	-	CFSAN025091
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36757	65.6	-	COQJ01	112	4300	4076	3/22/15	3/11/17	Scaffold	SC	SAMEA1403743	GCA_001381495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/495/GCA_001381495.1_7755_3_62	-	0401M
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.20335	39.6	-	CPNL01	116	2437	2206	3/22/15	3/11/17	Scaffold	SC	SAMEA1408326	GCA_001129405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/405/GCA_001129405.1_7444_8_17	-	9706+10167
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.08924	39.6	-	CMKO01	38	2307	2066	3/23/15	3/11/17	Scaffold	SC	SAMEA1029345	GCA_001129445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/445/GCA_001129445.1_7054_4_4	-	SMRU3028
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39944	65.6	-	COYQ01	112	4302	4110	3/22/15	3/11/17	Scaffold	SC	SAMEA1403744	GCA_001381515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/515/GCA_001381515.1_7841_7_57	-	1919M
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.63926	50.4	-	LPTU01	298	6262	5731	2/24/16	2/25/17	Contig	FDA/CFSAN	SAMN04338508	GCA_001571495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/495/GCA_001571495.1_ASM157149v1	-	CFSAN025090
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.27281	52	-	MYXS01	214	5568	5218	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360028	GCA_002044675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/675/GCA_002044675.1_ASM204467v1	-	BCW_6224
Staphylococcus aureus subsp. aureus CO-08	904794	PRJNA53823	53823	Terrabacteria group	Firmicutes	2.78733	32.7	-	AJKD01	55	2910	2701	8/30/13	3/2/17	Contig	J. Craig Venter Institute	SAMN00138225	GCA_000463035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/463/035/GCA_000463035.1_Saureusco08v1.0	-	CO-08
Staphylococcus aureus subsp. aureus ST772-MRSA-V	1343064	PRJNA207032	207032	Terrabacteria group	Firmicutes	2.74142	32.6	-	AZBT01	70	2821	2706	1/8/14	3/2/17	Contig	Alere technologies	SAMN02597330	GCA_000516935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/516/935/GCA_000516935.1_ST772-1.0	24359724	ST772-MRSA-V
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.92182	52	-	MYXP01	150	5022	4752	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360031	GCA_002044705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/705/GCA_002044705.1_ASM204470v1	-	BCW_6227
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.61018	50.6	-	LPTW01	237	6098	5609	2/24/16	2/25/17	Contig	FDA/CFSAN	SAMN04338470	GCA_001571505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/505/GCA_001571505.1_ASM157150v1	-	CFSAN025092
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35854	65.6	-	COXT01	124	4293	4090	3/23/15	3/11/17	Scaffold	SC	SAMEA1403746	GCA_001381535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/535/GCA_001381535.1_7841_6_3	-	1772C
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21532	40.1	-	CPKX01	246	2336	2153	3/23/15	3/11/17	Scaffold	SC	SAMEA682570	GCA_001129485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/485/GCA_001129485.1_5429_8_6	-	09B09449
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.17382	39.6	-	CMNF01	59	2361	2114	3/22/15	3/11/17	Scaffold	SC	SAMEA1029449	GCA_001129505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/505/GCA_001129505.1_7092_6_17	-	SMRU3113
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36581	65.6	-	COWN01	125	4310	4083	3/23/15	3/11/17	Scaffold	SC	SAMEA1403747	GCA_001381555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/555/GCA_001381555.1_7769_8_73	-	1706F
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.24272	50.4	-	LPYB01	205	5669	5202	2/24/16	2/25/17	Contig	FDA/CFSAN	SAMN04338505	GCA_001571805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/805/GCA_001571805.1_ASM157180v1	-	CFSAN025096
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.897	52	-	MYXT01	128	5035	4737	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360027	GCA_002044725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/725/GCA_002044725.1_ASM204472v1	-	BCW_6223
Staphylococcus aureus M0662	1388505	PRJNA216678	216678	Terrabacteria group	Firmicutes	2.83379	32.8	-	JBAY01	14	2961	2805	1/31/14	3/2/17	Contig	Broad Institute	SAMN02325629	GCA_000527355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/355/GCA_000527355.1_Stap_aure_M0662_V1	-	M0662
Staphylococcus aureus M0741	1388500	PRJNA216673	216673	Terrabacteria group	Firmicutes	2.95126	32.9	-	JBBD01	73	3134	2932	1/31/14	3/2/17	Contig	Broad Institute	SAMN02325624	GCA_000527375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/375/GCA_000527375.1_Stap_aure_M0741_V1	-	M0741
Salmonella enterica subsp. enterica serovar Kintambo	1192730	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80769	52.1	-	MYXV01	795	5083	4463	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265040	GCA_002044735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/735/GCA_002044735.1_ASM204473v1	-	90-0348
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.45251	50.6	-	LPYA01	224	5880	5462	2/24/16	2/25/17	Contig	FDA/CFSAN	SAMN04338479	GCA_001571825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/825/GCA_001571825.1_ASM157182v1	-	CFSAN025095
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38111	65.6	-	COZE01	144	4321	4118	3/22/15	3/11/17	Scaffold	SC	SAMEA1403748	GCA_001381575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/575/GCA_001381575.1_7841_7_77	-	2027E
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.18647	39.7	-	CMDY01	79	2442	2233	3/21/15	3/11/17	Scaffold	SC	SAMEA1028633	GCA_001129605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/605/GCA_001129605.1_7011_4_23	-	SMRU2783
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.12729	39.6	-	CJZN01	89	2340	2093	3/21/15	3/11/17	Scaffold	SC	SAMEA974690	GCA_001129625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/625/GCA_001129625.1_6259_5_2	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3666	65.6	-	COXN01	113	4286	4071	3/23/15	3/11/17	Scaffold	SC	SAMEA1403749	GCA_001381595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/595/GCA_001381595.1_7841_6_2	-	1770A
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.77215	50.5	-	LPYE01	226	6282	5759	2/24/16	2/25/17	Contig	FDA/CFSAN	SAMN04338473	GCA_001571885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/885/GCA_001571885.1_ASM157188v1	-	CFSAN025100
Salmonella enterica subsp. enterica serovar Meleagridis	486999	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.71981	52.2	-	MYXZ01	42	4786	4517	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264928	GCA_002044745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/745/GCA_002044745.1_ASM204474v1	-	50-4424
Staphylococcus aureus M0732	1388494	PRJNA216667	216667	Terrabacteria group	Firmicutes	2.8144	32.8	-	JBBJ01	33	2941	2767	1/31/14	3/2/17	Contig	Broad Institute	SAMN02325618	GCA_000527395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/395/GCA_000527395.1_Stap_aure_M0732_V1	-	M0732
Staphylococcus aureus M0728	1388490	PRJNA216663	216663	Terrabacteria group	Firmicutes	2.90435	32.8	-	JBBN01	68	3076	2896	1/31/14	3/2/17	Contig	Broad Institute	SAMN02325614	GCA_000527415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/415/GCA_000527415.1_Stap_aure_M0728_V1	-	M0728
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89722	52	-	MYXU01	96	5024	4730	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360026	GCA_002044755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/755/GCA_002044755.1_ASM204475v1	-	BCW_6222
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.58062	50.3	-	LPYD01	233	6015	5560	2/24/16	2/25/17	Contig	FDA/CFSAN	SAMN04338472	GCA_001571905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/905/GCA_001571905.1_ASM157190v1	-	CFSAN025099
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36477	65.6	-	COQL01	131	4295	4068	3/23/15	3/11/17	Scaffold	SC	SAMEA1403750	GCA_001381615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/615/GCA_001381615.1_7755_3_63	-	0405R
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.21516	39.5	-	CLLT01	98	2465	2218	3/21/15	3/4/17	Scaffold	SC	SAMEA1028659	GCA_001129645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/645/GCA_001129645.1_6938_6_19	-	SMRU2683
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04824	39.6	-	CKBM01	125	2230	1983	3/21/15	3/4/17	Scaffold	SC	SAMEA974653	GCA_001129665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/665/GCA_001129665.1_6259_8_17	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36671	65.6	-	COYP01	118	4301	4078	3/23/15	3/11/17	Scaffold	SC	SAMEA1403752	GCA_001381635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/635/GCA_001381635.1_7841_7_56	-	1917K
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.23064	50.4	-	LPYG01	194	5640	5184	2/24/16	2/25/17	Contig	FDA/CFSAN	SAMN04338506	GCA_001571915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/915/GCA_001571915.1_ASM157191v1	-	CFSAN025102
Salmonella enterica subsp. enterica serovar Meleagridis	486999	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.82932	52.1	-	MYYE01	61	4921	4649	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264927	GCA_002044805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/805/GCA_002044805.1_ASM204480v1	-	03-0344
Staphylococcus aureus M0725	1388488	PRJNA216661	216661	Terrabacteria group	Firmicutes	2.89848	32.8	-	JBBP01	62	3047	2886	1/31/14	3/2/17	Contig	Broad Institute	SAMN02325612	GCA_000527435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/435/GCA_000527435.1_Stap_aure_M0725_V1	-	M0725
Staphylococcus aureus M0723	1388486	PRJNA216659	216659	Terrabacteria group	Firmicutes	2.87374	32.8	-	JBBR01	66	3058	2874	1/31/14	3/2/17	Contig	Broad Institute	SAMN02325610	GCA_000527455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/455/GCA_000527455.1_Stap_aure_M0723_V1	-	M0723
Salmonella enterica subsp. enterica serovar Choleraesuis	119912	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7417	52.2	-	MYYC01	87	4893	4517	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265080	GCA_002044825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/825/GCA_002044825.1_ASM204482v1	-	04-0075
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.23785	50.4	-	LPYH01	202	5653	5202	2/24/16	2/25/17	Contig	FDA/CFSAN	SAMN04338507	GCA_001571925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/925/GCA_001571925.1_ASM157192v1	-	CFSAN025103
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36465	65.6	-	COWO01	101	4292	4078	3/23/15	3/11/17	Scaffold	SC	SAMEA1403753	GCA_001381655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/655/GCA_001381655.1_7769_8_74	-	1709J
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.21261	39.4	-	CLJE01	51	2435	2194	3/21/15	3/4/17	Scaffold	SC	SAMEA1028858	GCA_001129685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/685/GCA_001129685.1_6925_7_22	-	SMRU2518
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.0473	39.8	-	CPTV01	223	2202	2003	3/23/15	3/4/17	Scaffold	SC	SAMEA1020603	GCA_001129725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/725/GCA_001129725.1_5749_6_11	-	LMG95
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36842	65.6	-	COLK01	111	4302	4086	3/23/15	3/11/17	Scaffold	SC	SAMEA1403754	GCA_001381675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/675/GCA_001381675.1_7156_6_20	-	0864Q
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.59146	50.6	-	LPYI01	228	6068	5596	2/24/16	2/25/17	Contig	FDA/CFSAN	SAMN04338476	GCA_001571965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/965/GCA_001571965.1_ASM157196v1	-	CFSAN025104
"Salmonella enterica subsp. houtenae serovar 44:z4,z23:-"	1050193	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.61303	51.7	-	MYYD01	90	4632	4291	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265074	GCA_002044835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/835/GCA_002044835.1_ASM204483v1	-	04-0023
Staphylococcus aureus M0710	1388477	PRJNA216648	216648	Terrabacteria group	Firmicutes	2.88668	32.9	-	JBCA01	53	3025	2856	1/31/14	3/2/17	Contig	Broad Institute	SAMN02325601	GCA_000527475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/475/GCA_000527475.1_Stap_aure_M0710_V1	-	M0710
Staphylococcus aureus M0704	1388472	PRJNA216643	216643	Terrabacteria group	Firmicutes	2.86805	32.9	-	JBCF01	65	3026	2879	1/31/14	3/2/17	Contig	Broad Institute	SAMN02325596	GCA_000527495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/495/GCA_000527495.1_Stap_aure_M0704_V1	-	M0704
Salmonella enterica subsp. enterica serovar Kottbus	224727	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.75601	52.2	-	MYYF01	38	4838	4607	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265043	GCA_002044865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/865/GCA_002044865.1_ASM204486v1	-	02-0219
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.46913	50.5	-	LPYJ01	202	5885	5450	2/24/16	2/25/17	Contig	FDA/CFSAN	SAMN04338481	GCA_001571985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/985/GCA_001571985.1_ASM157198v1	-	CFSAN025106
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36686	65.6	-	COSL01	112	4294	4076	3/23/15	3/11/17	Scaffold	SC	SAMEA1403756	GCA_001381695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/695/GCA_001381695.1_7755_4_42	-	0784D
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21427	39.5	-	CPRS01	96	2449	2212	3/23/15	3/4/17	Scaffold	SC	SAMEA1408204	GCA_001129865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/865/GCA_001129865.1_7444_8_39	-	9912+17151
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.03941	39.8	-	CPTE01	85	2206	1993	3/23/15	3/4/17	Scaffold	SC	SAMEA1020464	GCA_001129945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/945/GCA_001129945.1_6246_3_1	-	LMG872
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36515	65.6	-	COWJ01	107	4294	4079	3/23/15	3/11/17	Scaffold	SC	SAMEA1403757	GCA_001381715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/715/GCA_001381715.1_7769_8_70	-	1694S
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.76592	50.5	-	LPYF01	220	6254	5749	2/24/16	2/25/17	Contig	FDA/CFSAN	SAMN04338474	GCA_001572185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/185/GCA_001572185.1_ASM157218v1	-	CFSAN025101
Salmonella enterica subsp. enterica serovar Meleagridis	486999	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7957	52.2	-	MYYK01	44	4872	4604	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264926	GCA_002044885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/885/GCA_002044885.1_ASM204488v1	-	98-0244
Staphylococcus aureus M0696	1388465	PRJNA216636	216636	Terrabacteria group	Firmicutes	2.8889	32.8	-	JBCM01	66	3055	2876	1/31/14	3/2/17	Contig	Broad Institute	SAMN02325589	GCA_000527515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/515/GCA_000527515.1_Stap_aure_M0696_V1	-	M0696
Staphylococcus aureus M0691	1388463	PRJNA216634	216634	Terrabacteria group	Firmicutes	2.82404	32.8	-	JBCO01	49	2991	2823	1/31/14	3/2/17	Contig	Broad Institute	SAMN02325587	GCA_000527535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/535/GCA_000527535.1_Stap_aure_M0691_V1	-	M0691
"Salmonella enterica subsp. houtenae serovar 44:z4,z23:-"	1050193	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.55952	51.7	-	MYYL01	85	4565	4217	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265073	GCA_002044905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/905/GCA_002044905.1_ASM204490v1	-	97-0047
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.38746	50.6	-	LPZF01	176	5769	5363	2/24/16	2/25/17	Contig	FDA/CFSAN	SAMN04338492	GCA_001572405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/405/GCA_001572405.1_ASM157240v1	-	CFSAN025133
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36368	65.6	-	COZO01	105	4294	4084	3/23/15	3/11/17	Scaffold	SC	SAMEA1403759	GCA_001381735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/735/GCA_001381735.1_7841_7_93	-	2078K
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.04133	39.5	-	CLSU01	75	2237	2022	3/21/15	3/4/17	Scaffold	SC	SAMEA1028964	GCA_001130005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/005/GCA_001130005.1_6972_4_16	-	SMRU2608
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.13077	39.6	-	CMKV01	49	2365	2138	3/23/15	3/4/17	Scaffold	SC	SAMEA1029362	GCA_001130045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/045/GCA_001130045.1_7054_5_17	-	SMRU3065
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36441	65.6	-	COZA01	130	4303	4073	3/23/15	3/11/17	Scaffold	SC	SAMEA1403760	GCA_001381755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/755/GCA_001381755.1_7841_7_78	-	2028F
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.32925	50.4	-	LPZH01	214	5807	5325	2/24/16	2/25/17	Contig	FDA/CFSAN	SAMN04338510	GCA_001572455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/455/GCA_001572455.1_ASM157245v1	-	CFSAN025136
"Salmonella enterica subsp. enterica serovar 9,12:l,z28:-"	1967639	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.56372	52.1	-	MYYI01	53	4650	4403	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264908	GCA_002044925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/925/GCA_002044925.1_ASM204492v1	-	01-0173
Staphylococcus aureus M0626	1388416	PRJNA216587	216587	Terrabacteria group	Firmicutes	2.84385	32.9	-	JBEJ01	33	2972	2819	1/31/14	3/2/17	Contig	Broad Institute	SAMN02325540	GCA_000527555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/555/GCA_000527555.1_Stap_aure_M0626_V1	-	M0626
Staphylococcus aureus M0642	1388426	PRJNA216597	216597	Terrabacteria group	Firmicutes	2.88561	32.9	-	JBDZ01	57	3053	2871	1/31/14	3/2/17	Contig	Broad Institute	SAMN02325550	GCA_000527575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/575/GCA_000527575.1_Stap_aure_M0642_V1	-	M0642
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83469	52.1	-	MYYJ01	198	4948	4672	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03359999	GCA_002044945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/945/GCA_002044945.1_ASM204494v1	-	BCW_6183
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.5669	50.6	-	LPZB01	213	6028	5553	2/24/16	2/25/17	Contig	FDA/CFSAN	SAMN04338504	GCA_001572505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/505/GCA_001572505.1_ASM157250v1	-	CFSAN025129
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37189	65.6	-	COQE01	100	4294	4101	3/23/15	3/11/17	Scaffold	SC	SAMEA1403761	GCA_001381775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/775/GCA_001381775.1_7755_3_60	-	0399K
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.99364	39.6	-	CKAH01	61	2190	1998	3/21/15	3/4/17	Scaffold	SC	SAMEA974621	GCA_001130085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/085/GCA_001130085.1_6259_6_14	-	35F
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.04473	39.6	-	CLEK01	50	2259	2059	3/21/15	3/4/17	Scaffold	SC	SAMEA1026047	GCA_001130125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/125/GCA_001130125.1_6899_6_2	-	SMRU2066
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36593	65.6	-	COWL01	100	4273	4090	3/23/15	3/11/17	Scaffold	SC	SAMEA1403762	GCA_001381795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/795/GCA_001381795.1_7769_8_71	-	type strain: 1695
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.60188	50.5	-	LPZE01	208	6065	5581	2/24/16	2/25/17	Contig	FDA/CFSAN	SAMN04338497	GCA_001572565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/565/GCA_001572565.1_ASM157256v1	-	CFSAN025125
Salmonella enterica subsp. enterica serovar Rissen	399587	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83226	52.1	-	MYYQ01	66	4916	4648	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264953	GCA_002044955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/955/GCA_002044955.1_ASM204495v1	-	2012K-0157
Staphylococcus aureus M0644	1388428	PRJNA216599	216599	Terrabacteria group	Firmicutes	2.88047	32.9	-	JBDX01	50	3037	2862	1/31/14	3/2/17	Contig	Broad Institute	SAMN02325552	GCA_000527595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/595/GCA_000527595.1_Stap_aure_M0644_V1	-	M0644
Staphylococcus aureus M0651	1388432	PRJNA216603	216603	Terrabacteria group	Firmicutes	2.90172	32.8	-	JBDT01	61	3077	2895	1/31/14	3/2/17	Contig	Broad Institute	SAMN02325556	GCA_000527615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/615/GCA_000527615.1_Stap_aure_M0651_V1	-	M0651
"Salmonella enterica subsp. houtenae serovar 50:g,z51:-"	1173947	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.67616	51.6	-	MYYM01	93	4659	4283	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265025	GCA_002044985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/985/GCA_002044985.1_ASM204498v1	-	96-0516
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.49199	50.4	-	LPZG01	296	5924	5423	2/24/16	2/25/17	Contig	FDA/CFSAN	SAMN04338499	GCA_001572585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/585/GCA_001572585.1_ASM157258v1	-	CFSAN025135
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37196	65.6	-	COQK01	102	4317	4112	3/23/15	3/11/17	Scaffold	SC	SAMEA1403763	GCA_001381815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/815/GCA_001381815.1_7755_3_61	-	0400L
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21794	39.6	-	CPQM01	87	2464	2202	3/22/15	3/4/17	Scaffold	SC	SAMEA1408221	GCA_001130145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/145/GCA_001130145.1_7444_8_89	-	0508+26122
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1197	39.6	-	CLIU01	77	2329	2082	3/21/15	3/4/17	Scaffold	SC	SAMEA1026124	GCA_001130205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/205/GCA_001130205.1_6925_6_8	-	SMRU2192
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3683	65.6	-	COZD01	115	4298	4085	3/22/15	3/11/17	Scaffold	SC	SAMEA1403765	GCA_001381835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/835/GCA_001381835.1_7841_7_79	-	2033L
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.45353	50.4	-	LPZJ01	280	5895	5395	2/24/16	2/25/17	Contig	FDA/CFSAN	SAMN04338500	GCA_001572605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/605/GCA_001572605.1_ASM157260v1	-	CFSAN025138
Salmonella enterica subsp. enterica serovar Monschaui	29480	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89239	52	-	MYYW01	49	4983	4731	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265056	GCA_002045005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/005/GCA_002045005.1_ASM204500v1	-	2009K2058
Staphylococcus aureus M0655	1388436	PRJNA216607	216607	Terrabacteria group	Firmicutes	2.82884	32.7	-	JBDP01	28	2961	2810	1/31/14	3/2/17	Contig	Broad Institute	SAMN02325560	GCA_000527635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/635/GCA_000527635.1_Stap_aure_M0655_V1	-	M0655
Staphylococcus aureus M0661	1388441	PRJNA216612	216612	Terrabacteria group	Firmicutes	2.85772	32.9	-	JBDK01	40	3006	2845	1/31/14	3/2/17	Contig	Broad Institute	SAMN02325565	GCA_000527655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/655/GCA_000527655.1_Stap_aure_M0661_V1	-	M0661
Salmonella enterica subsp. enterica serovar Meleagridis	486999	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.79507	52.1	-	MYYX01	45	4857	4588	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264925	GCA_002045015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/015/GCA_002045015.1_ASM204501v1	-	2009K0353
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.26179	50.6	-	LPZI01	278	5686	5193	2/24/16	2/25/17	Contig	FDA/CFSAN	SAMN04338501	GCA_001572615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/615/GCA_001572615.1_ASM157261v1	-	CFSAN025137
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36628	65.6	-	COYR01	124	4305	4085	3/22/15	3/11/17	Scaffold	SC	SAMEA1403766	GCA_001381855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/855/GCA_001381855.1_7841_7_58	-	1920N
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.18751	39.6	-	CPTI01	232	2372	2190	3/22/15	3/11/17	Scaffold	SC	SAMEA682303	GCA_001130305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/305/GCA_001130305.1_5392_5_1	-	spnSP522
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10415	39.5	-	CKBX01	51	2341	2113	3/21/15	3/11/17	Scaffold	SC	SAMEA974643	GCA_001130325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/325/GCA_001130325.1_6259_8_8	-	19B
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36974	65.6	-	COSK01	105	4291	4094	3/23/15	3/11/17	Scaffold	SC	SAMEA1403768	GCA_001381875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/875/GCA_001381875.1_7755_4_41	-	0782B
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.4399	50.6	-	LPZK01	216	5860	5442	2/24/16	2/25/17	Contig	FDA/CFSAN	SAMN04338484	GCA_001572635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/635/GCA_001572635.1_ASM157263v1	-	CFSAN025132
Salmonella enterica subsp. enterica serovar Ibadan	1967646	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.52205	52.2	-	MYYY01	34	4551	4303	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265010	GCA_002045025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/025/GCA_002045025.1_ASM204502v1	-	2009K0321
Staphylococcus aureus M0667	1388444	PRJNA216615	216615	Terrabacteria group	Firmicutes	2.89076	32.8	-	JBDH01	66	3073	2892	1/31/14	3/2/17	Contig	Broad Institute	SAMN02325568	GCA_000527675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/527/675/GCA_000527675.1_Stap_aure_M0667_V1	-	M0667
Staphylococcus aureus subsp. aureus S0460	1288968	PRJEB1384	232794	Terrabacteria group	Firmicutes	2.83345	32.8	-	CAVH01	167	2990	2737	1/6/14	3/2/17	Contig	UMCU	SAMEA3138877	GCA_000530215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/215/GCA_000530215.1_S0460D1	-	S0460
Salmonella enterica subsp. enterica serovar Kottbus	224727	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.73655	52.2	-	MYYP01	56	4841	4614	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265042	GCA_002045035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/035/GCA_002045035.1_ASM204503v1	-	2012K-1725
Escherichia coli	562	PRJNA306781	306781	Proteobacteria	Gammaproteobacteria	4.7129	50.8	-	LRDE01	3	4868	4519	3/4/16	2/25/17	Contig	University of Idaho	SAMN04393383	GCA_001582895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/895/GCA_001582895.1_ASM158289v1	-	DV133T
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36853	65.6	-	COLG01	108	4294	4080	3/23/15	3/11/17	Scaffold	SC	SAMEA1403769	GCA_001381895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/895/GCA_001381895.1_7156_6_16	-	1595K
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.16001	39.6	-	CMTE01	64	2337	2075	3/23/15	3/11/17	Scaffold	SC	SAMEA1022781	GCA_001130365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/365/GCA_001130365.1_5737_2_10	-	32005
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.15188	39.5	-	CLES01	107	2401	2136	3/21/15	3/11/17	Scaffold	SC	SAMEA1026088	GCA_001130445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/445/GCA_001130445.1_6899_6_5	-	SMRU2069
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36759	65.6	-	COUD01	112	4298	4083	3/22/15	3/11/17	Scaffold	SC	SAMEA1403770	GCA_001381915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/915/GCA_001381915.1_7755_5_95	-	1080A
Escherichia coli	562	PRJNA306781	306781	Proteobacteria	Gammaproteobacteria	4.75411	50.8	-	LRDF01	4	4905	4561	3/4/16	2/25/17	Contig	University of Idaho	SAMN04393384	GCA_001582905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/582/905/GCA_001582905.1_ASM158290v1	-	DV159
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.48829	52.2	-	MYYZ01	70	4519	4297	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03359983	GCA_002045085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/085/GCA_002045085.1_ASM204508v1	-	BCW_6167
Staphylococcus aureus S1475	1407498	PRJEB4746	235290	Terrabacteria group	Firmicutes	2.74881	32.7	-	CBWW01	262	2813	2697	1/15/14	3/2/17	Contig	UMCU	SAMEA3138894	GCA_000530855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/530/855/GCA_000530855.1_S1475	-	S1475
Staphylococcus aureus M0018	1387998	PRJNA216167	216167	Terrabacteria group	Firmicutes	2.92957	32.8	-	JBTR01	69	3126	2937	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325122	GCA_000533215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/215/GCA_000533215.1_Stap_aure_M0018_V1	-	M0018
Salmonella enterica subsp. enterica serovar Kintambo	1192730	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.86036	51.9	-	MYZC01	97	4884	4600	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265037	GCA_002045095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/095/GCA_002045095.1_ASM204509v1	-	07-0920
Escherichia coli	562	PRJNA308525	308525	Proteobacteria	Gammaproteobacteria	4.72597	50.7	-	LRAB01	62	4832	4565	3/24/16	2/25/17	Contig	Yonsei University	SAMN04396675	GCA_001596855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/855/GCA_001596855.1_ASM159685v1	-	tEC
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3618	65.6	-	CONV01	97	4270	4085	3/23/15	3/11/17	Scaffold	SC	SAMEA1403772	GCA_001381935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/935/GCA_001381935.1_7156_7_93	-	1295J
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.23065	39.7	-	CLOQ01	120	2507	2266	3/21/15	3/11/17	Scaffold	SC	SAMEA1028754	GCA_001130505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/505/GCA_001130505.1_6949_1_9	-	SMRU2409
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.15592	39.4	-	CLKP01	94	2409	2172	3/21/15	3/11/17	Scaffold	SC	SAMEA1028785	GCA_001130525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/525/GCA_001130525.1_6938_5_13	-	SMRU2653
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36937	65.6	-	COSJ01	112	4307	4084	3/22/15	3/11/17	Scaffold	SC	SAMEA1403773	GCA_001381955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/955/GCA_001381955.1_7755_4_40	-	0780Z
Escherichia coli	562	PRJNA308524	308524	Proteobacteria	Gammaproteobacteria	5.24327	50.6	-	LRBX01	152	5536	5149	3/24/16	2/25/17	Contig	Yonsei University	SAMN04396674	GCA_001596865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/596/865/GCA_001596865.1_ASM159686v1	-	atEC
Salmonella enterica subsp. enterica serovar Kottbus	224727	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66226	52.2	-	MYZA01	54	4691	4470	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265041	GCA_002045115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/115/GCA_002045115.1_ASM204511v1	-	08-0447
Staphylococcus aureus M0039	1388012	PRJNA216181	216181	Terrabacteria group	Firmicutes	2.91432	32.9	-	JBTS01	83	3101	2906	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325136	GCA_000533235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/235/GCA_000533235.1_Stap_aure_M0039_V1	-	M0039
Staphylococcus aureus M0050	1388021	PRJNA216190	216190	Terrabacteria group	Firmicutes	2.89798	32.9	-	JBTT01	79	3060	2881	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325145	GCA_000533255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/255/GCA_000533255.1_Stap_aure_M0050_V1	-	M0050
"Salmonella enterica subsp. houtenae serovar 44:z4,z23:-"	1050193	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.59089	51.7	-	MYZB01	67	4600	4262	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265071	GCA_002045125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/125/GCA_002045125.1_ASM204512v1	-	08-0148
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.31829	50.7	-	LOJC01	89	5689	5322	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002661	GCA_001606435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/435/GCA_001606435.1_ASM160643v1	-	STEC 2064
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35312	65.6	-	COXE01	92	4268	4080	3/23/15	3/11/17	Scaffold	SC	SAMEA1403774	GCA_001381975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/975/GCA_001381975.1_7769_8_94	-	1766W
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.01531	39.7	-	CMAT01	63	2202	1923	3/21/15	3/10/17	Scaffold	SC	SAMEA1028772	GCA_001130725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/725/GCA_001130725.1_7004_6_30	-	SMRU2838
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.1722	39.4	-	CMLG01	82	2400	2154	3/22/15	3/10/17	Scaffold	SC	SAMEA1029226	GCA_001130785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/785/GCA_001130785.1_7054_5_24	-	SMRU3072
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38129	65.6	-	COUE01	91	4298	4104	3/23/15	3/11/17	Scaffold	SC	SAMEA1403777	GCA_001381995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/381/995/GCA_001381995.1_7755_5_96	-	1084E
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.25755	50.5	-	LOGE01	170	5664	5275	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002644	GCA_001606545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/545/GCA_001606545.1_ASM160654v1	-	STEC 1284
Salmonella enterica subsp. enterica serovar Choleraesuis var. Kunzendorf	1630946	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.73768	52.2	-	MYZD01	72	4880	4508	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265081	GCA_002045165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/165/GCA_002045165.1_ASM204516v1	-	07-0094
Staphylococcus aureus M0056	1388025	PRJNA216194	216194	Terrabacteria group	Firmicutes	2.83483	32.8	-	JBTU01	44	2977	2804	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325149	GCA_000533275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/275/GCA_000533275.1_Stap_aure_M0056_V1	-	M0056
Staphylococcus aureus M0062	1388029	PRJNA216198	216198	Terrabacteria group	Firmicutes	2.88681	32.9	-	JBTV01	46	3049	2869	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325153	GCA_000533295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/295/GCA_000533295.1_Stap_aure_M0062_V1	-	M0062
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.78658	52	-	MYZH01	429	4957	4547	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03359975	GCA_002045175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/175/GCA_002045175.1_ASM204517v1	-	BCW_6159
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.02105	50.7	-	LOGD01	62	5244	4941	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002643	GCA_001606555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/555/GCA_001606555.1_ASM160655v1	-	STEC 1270
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36704	65.6	-	COZI01	122	4298	4074	3/23/15	3/11/17	Scaffold	SC	SAMEA1403779	GCA_001382015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/015/GCA_001382015.1_7841_7_82	-	2039S
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	1.96807	39.8	-	CKXL01	53	2143	1950	3/21/15	3/10/17	Scaffold	SC	SAMEA1025828	GCA_001130945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/945/GCA_001130945.1_6823_6_23	-	SMRU1991
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05951	39.7	-	CMAC01	55	2257	2041	3/21/15	3/10/17	Scaffold	SC	SAMEA1028610	GCA_001130985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/985/GCA_001130985.1_7004_5_21	-	SMRU2877
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3659	65.6	-	COLE01	116	4293	4082	3/23/15	3/11/17	Scaffold	SC	SAMEA1403780	GCA_001382035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/035/GCA_001382035.1_7156_6_15	-	1594J
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.08124	50.7	-	LOGO01	159	5440	5076	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002655	GCA_001606635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/635/GCA_001606635.1_ASM160663v1	-	STEC 1513
"Salmonella enterica subsp. enterica serovar 9,12:l,z28:-"	1967639	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66427	52.1	-	MYZF01	29	4750	4502	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264907	GCA_002045195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/195/GCA_002045195.1_ASM204519v1	-	06-0866
Staphylococcus aureus M0067	1388033	PRJNA216202	216202	Terrabacteria group	Firmicutes	2.91471	32.9	-	JBTW01	38	3071	2904	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325157	GCA_000533315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/315/GCA_000533315.1_Stap_aure_M0067_V1	-	M0067
Staphylococcus aureus M0068	1388034	PRJNA216203	216203	Terrabacteria group	Firmicutes	2.83604	32.8	-	JBTX01	9	2958	2800	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325158	GCA_000533335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/335/GCA_000533335.1_Stap_aure_M0068_V1	-	M0068
"Salmonella enterica subsp. houtenae serovar 50:g,z51:-"	1173947	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.78941	51.5	-	MYZE01	146	4864	4473	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265023	GCA_002045205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/205/GCA_002045205.1_ASM204520v1	-	07-0051
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.44531	50.6	-	LOGV01	111	5812	5412	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002666	GCA_001606675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/675/GCA_001606675.1_ASM160667v1	-	STEC 2174
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36593	65.6	-	COZB01	127	4296	4078	3/23/15	3/11/17	Scaffold	SC	SAMEA1403783	GCA_001382055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/055/GCA_001382055.1_7841_7_81	-	2035N
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.23059	39.4	-	CLKJ01	58	2507	2254	3/21/15	3/10/17	Scaffold	SC	SAMEA1029253	GCA_001131005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/005/GCA_001131005.1_6938_3_23	-	SMRU3148
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08542	39.6	-	CKZO01	42	2276	2077	3/21/15	3/10/17	Scaffold	SC	SAMEA1026135	GCA_001131025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/025/GCA_001131025.1_6840_1_4	-	SMRU1756
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35821	65.6	-	COYO01	118	4283	4076	3/23/15	3/12/17	Scaffold	SC	SAMEA1403785	GCA_001382095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/095/GCA_001382095.1_7841_7_55	-	1908A
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.4081	50.8	-	LOCT01	137	5778	5374	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002609	GCA_001606775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/775/GCA_001606775.1_ASM160677v1	-	STEC 329
Salmonella enterica subsp. enterica serovar Baildon	913068	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.67181	52.1	-	MYZI01	75	4731	4504	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264868	GCA_002045245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/245/GCA_002045245.1_ASM204524v1	-	91-0202
Staphylococcus aureus M0073	1388038	PRJNA216207	216207	Terrabacteria group	Firmicutes	2.93555	32.9	-	JBTY01	35	3113	2937	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325162	GCA_000533355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/355/GCA_000533355.1_Stap_aure_M0073_V1	-	M0073
Staphylococcus aureus M0114	1388066	PRJNA216235	216235	Terrabacteria group	Firmicutes	2.8082	32.7	-	JBTZ01	30	2934	2769	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325190	GCA_000533375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/375/GCA_000533375.1_Stap_aure_M0114_V1	-	M0114
Salmonella enterica subsp. enterica serovar Baildon	913068	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.63238	52.2	-	MYZJ01	54	4677	4466	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264867	GCA_002045255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/255/GCA_002045255.1_ASM204525v1	-	88-0456
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.20688	50.4	-	LOFV01	195	5603	5158	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002635	GCA_001606865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/865/GCA_001606865.1_ASM160686v1	-	STEC 1161
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.40256	65.6	-	COZC01	99	4316	4116	3/23/15	3/11/17	Scaffold	SC	SAMEA1403786	GCA_001382115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/115/GCA_001382115.1_7841_7_83	-	2042W
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.1291	39.6	-	CMBW01	51	2371	2141	3/21/15	3/10/17	Scaffold	SC	SAMEA1029456	GCA_001131105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/105/GCA_001131105.1_7004_7_61	-	SMRU2893
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.07975	39.6	-	CLAE01	53	2284	2032	3/21/15	3/10/17	Scaffold	SC	SAMEA1025691	GCA_001131145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/145/GCA_001131145.1_6840_3_5	-	SMRU1805
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35922	65.6	-	COUC01	102	4280	4086	3/22/15	3/11/17	Scaffold	SC	SAMEA1403787	GCA_001382135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/135/GCA_001382135.1_7755_5_92	-	1054X
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.54251	50.6	-	LOJD01	152	5945	5526	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002662	GCA_001606955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/955/GCA_001606955.1_ASM160695v1	-	STEC 2074
Salmonella enterica subsp. enterica serovar Cubana	189201	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.87499	52.2	-	MYZL01	68	4960	4688	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265003	GCA_002045265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/265/GCA_002045265.1_ASM204526v1	-	89-0199
Staphylococcus aureus M0126	1388077	PRJNA216246	216246	Terrabacteria group	Firmicutes	2.86803	32.9	-	JBUA01	17	2993	2833	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325201	GCA_000533395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/395/GCA_000533395.1_Stap_aure_M0126_V1	-	M0126
Staphylococcus aureus M0133	1388082	PRJNA216251	216251	Terrabacteria group	Firmicutes	2.89996	32.9	-	JBUB01	33	3054	2886	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325206	GCA_000533415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/415/GCA_000533415.1_Stap_aure_M0133_V1	-	M0133
Salmonella enterica subsp. enterica serovar Blockley	57741	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70347	52.1	-	MYZK01	46	4732	4516	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264989	GCA_002045305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/305/GCA_002045305.1_ASM204530v1	-	86-0206
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.01293	50.5	-	LOFT01	116	5336	4947	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002633	GCA_001607045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/045/GCA_001607045.1_ASM160704v1	-	STEC 940
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3683	65.6	-	COLH01	118	4298	4081	3/23/15	3/11/17	Scaffold	SC	SAMEA1403790	GCA_001382155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/155/GCA_001382155.1_7156_6_17	-	1596L
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.15471	39.7	-	CLGQ01	64	2392	2174	3/21/15	3/10/17	Scaffold	SC	SAMEA1026152	GCA_001131165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/165/GCA_001131165.1_6925_4_22	-	SMRU2158
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.1245	39.6	-	CPKW01	73	2328	2108	3/23/15	3/4/17	Scaffold	SC	SAMEA1019958	GCA_001131225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/225/GCA_001131225.1_6569_4_1	-	DCC1524
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36736	65.6	-	COPJ01	121	4295	4075	3/22/15	3/11/17	Scaffold	SC	SAMEA1403792	GCA_001382175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/175/GCA_001382175.1_7755_2_34	-	0273Y
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.17021	50.5	-	LOGY01	156	5459	5056	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002669	GCA_001607125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/125/GCA_001607125.1_ASM160712v1	-	STEC 2236
Salmonella enterica subsp. enterica serovar Blockley	57741	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83357	52	-	MYZR01	59	4923	4681	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264988	GCA_002045325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/325/GCA_002045325.1_ASM204532v1	-	67-3024
Staphylococcus aureus M0158	1388100	PRJNA216269	216269	Terrabacteria group	Firmicutes	2.89097	32.9	-	JBUC01	51	3052	2873	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325224	GCA_000533435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/435/GCA_000533435.1_Stap_aure_M0158_V1	-	M0158
Staphylococcus aureus M0180	1388117	PRJNA216286	216286	Terrabacteria group	Firmicutes	2.87748	32.8	-	JBUD01	46	3025	2858	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325241	GCA_000533455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/455/GCA_000533455.1_Stap_aure_M0180_V1	-	M0180
"Salmonella enterica subsp. houtenae serovar 48:g,z51:-"	1050190	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.48498	51.9	-	MYZM01	434	4644	4091	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265022	GCA_002045345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/345/GCA_002045345.1_ASM204534v1	-	91-0492
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.06986	50.6	-	LOFZ01	180	5422	5040	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002639	GCA_001607175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/175/GCA_001607175.1_ASM160717v1	-	STEC 1201
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36914	65.6	-	COUB01	116	4288	4082	3/23/15	3/11/17	Scaffold	SC	SAMEA1403793	GCA_001382195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/195/GCA_001382195.1_7755_5_94	-	1070P
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09993	39.6	-	CKEV01	147	2283	2044	3/21/15	3/4/17	Scaffold	SC	SAMEA1023689	GCA_001131245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/245/GCA_001131245.1_6630_3_1	-	6B
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.08122	39.6	-	CKEN01	72	2282	2044	3/21/15	3/6/17	Scaffold	SC	SAMEA1023792	GCA_001131265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/265/GCA_001131265.1_6630_2_17	-	14
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39748	65.6	-	COLI01	91	4303	4113	3/22/15	3/11/17	Scaffold	SC	SAMEA1403795	GCA_001382215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/215/GCA_001382215.1_7156_6_18	-	1601R
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.44209	50.6	-	LPWY01	132	5831	5404	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002674	GCA_001607285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/285/GCA_001607285.1_ASM160728v1	-	STEC 2363
Salmonella enterica subsp. enterica serovar Cubana	189201	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.90029	52.3	-	MYZP01	86	4975	4712	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265002	GCA_002045355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/355/GCA_002045355.1_ASM204535v1	-	49-1017
Staphylococcus aureus M0248	1388163	PRJNA216332	216332	Terrabacteria group	Firmicutes	2.90818	32.8	-	JBUE01	65	3076	2875	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325287	GCA_000533475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/475/GCA_000533475.1_Stap_aure_M0248_V1	-	M0248
Staphylococcus aureus M0259	1388170	PRJNA216339	216339	Terrabacteria group	Firmicutes	2.87081	32.8	-	JBUF01	48	3031	2857	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325294	GCA_000533495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/495/GCA_000533495.1_Stap_aure_M0259_V1	-	M0259
Salmonella enterica subsp. enterica serovar Lomalinda	1967650	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.57909	52.2	-	MYZT01	85	4673	4350	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265049	GCA_002045385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/385/GCA_002045385.1_ASM204538v1	-	87-0491
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.28424	50.5	-	LOIP01	128	5657	5276	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002693	GCA_001607335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/335/GCA_001607335.1_ASM160733v1	-	STEC 2797
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36476	65.6	-	COXF01	108	4285	4080	3/23/15	3/11/17	Scaffold	SC	SAMEA1403796	GCA_001382235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/235/GCA_001382235.1_7769_8_95	-	1767X
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.17389	39.6	-	CMSX01	133	2446	2191	3/22/15	3/4/17	Scaffold	SC	SAMEA2061963	GCA_001131305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/305/GCA_001131305.1_9803_8_79	-	19B
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.04922	39.5	-	CRSK01	75	2254	2030	3/23/15	3/4/17	Scaffold	SC	SAMEA1025619	GCA_001131345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/345/GCA_001131345.1_6805_2_8	-	SMRU1424
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36705	65.6	-	COYH01	117	4298	4079	3/23/15	3/11/17	Scaffold	SC	SAMEA1403798	GCA_001382255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/255/GCA_001382255.1_7841_6_7	-	1782N
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	4.95447	50.6	-	LOIF01	110	5250	4867	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002680	GCA_001607525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/525/GCA_001607525.1_ASM160752v1	-	STEC 2539
Salmonella enterica subsp. enterica serovar Lomalinda	1967650	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.5764	52.2	-	MYZW01	89	4669	4347	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265048	GCA_002045405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/405/GCA_002045405.1_ASM204540v1	-	53-4522
Staphylococcus aureus M0267	1388175	PRJNA216344	216344	Terrabacteria group	Firmicutes	2.81851	32.9	-	JBUG01	28	2953	2781	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325299	GCA_000533515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/515/GCA_000533515.1_Stap_aure_M0267_V1	-	M0267
Staphylococcus aureus M0269	1388176	PRJNA216345	216345	Terrabacteria group	Firmicutes	2.75512	32.8	-	JBUH01	17	2823	2687	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325300	GCA_000533535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/535/GCA_000533535.1_Stap_aure_M0269_V1	-	M0269
Salmonella enterica subsp. enterica serovar Eastbourne	486993	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.98375	51.9	-	MYZX01	892	5015	4690	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264885	GCA_002045425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/425/GCA_002045425.1_ASM204542v1	-	05-0414
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.34251	50.7	-	LOIH01	147	5682	5287	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002682	GCA_001607555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/555/GCA_001607555.1_ASM160755v1	-	STEC 2573
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36339	65.6	-	COTN01	111	4288	4083	3/22/15	3/11/17	Scaffold	SC	SAMEA1403799	GCA_001382275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/275/GCA_001382275.1_7755_5_77	-	0906L
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08858	39.7	-	CLTG01	40	2248	2022	3/21/15	3/6/17	Scaffold	SC	SAMEA1028756	GCA_001131385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/385/GCA_001131385.1_6972_5_23	-	SMRU2639
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.1157	39.5	-	CMNP01	54	2303	2077	3/23/15	3/4/17	Scaffold	SC	SAMEA1029315	GCA_001131445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/445/GCA_001131445.1_7092_6_8	-	SMRU3104
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36281	65.6	-	COYF01	96	4291	4086	3/23/15	3/11/17	Scaffold	SC	SAMEA1403801	GCA_001382295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/295/GCA_001382295.1_7841_6_46	-	1887C
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.18503	50.7	-	LOII01	115	5507	5162	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002683	GCA_001607575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/575/GCA_001607575.1_ASM160757v1	-	STEC 2591
Salmonella enterica subsp. enterica serovar Edinburgh	940231	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.52206	52.2	-	MYZZ01	78	4587	4323	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264891	GCA_002045435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/435/GCA_002045435.1_ASM204543v1	-	05-0283
Staphylococcus aureus M0277	1388181	PRJNA216350	216350	Terrabacteria group	Firmicutes	2.85755	32.9	-	JBUI01	17	2998	2837	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325305	GCA_000533555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/555/GCA_000533555.1_Stap_aure_M0277_V1	-	M0277
Staphylococcus aureus M0291	1388190	PRJNA216359	216359	Terrabacteria group	Firmicutes	2.93288	32.9	-	JBUJ01	29	3107	2935	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325314	GCA_000533575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/575/GCA_000533575.1_Stap_aure_M0291_V1	-	M0291
Salmonella enterica subsp. enterica serovar Alachua	913240	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.86244	52.2	-	MZAA01	64	4938	4668	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264978	GCA_002045465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/465/GCA_002045465.1_ASM204546v1	-	04-0301
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.30445	50.4	-	LOIJ01	104	5570	5242	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002684	GCA_001607595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/595/GCA_001607595.1_ASM160759v1	-	STEC 2595
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37998	65.6	-	COQA01	96	4287	4090	3/23/15	3/11/17	Scaffold	SC	SAMEA1403803	GCA_001382315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/315/GCA_001382315.1_7755_2_6	-	0123K
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12771	39.6	-	CMOY01	55	2346	2114	3/22/15	3/4/17	Scaffold	SC	SAMEA2061713	GCA_001131465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/465/GCA_001131465.1_9803_7_43	-	6C
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15239	39.5	-	CKKF01	64	2386	2150	3/21/15	3/4/17	Scaffold	SC	SAMEA1023884	GCA_001131545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/545/GCA_001131545.1_6631_7_11	-	20
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39714	65.6	-	COPR01	98	4304	4107	3/23/15	3/11/17	Scaffold	SC	SAMEA1403806	GCA_001382335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/335/GCA_001382335.1_7755_2_7	-	0124L
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.13017	50.8	-	LOIK01	132	5422	5036	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002686	GCA_001607605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/605/GCA_001607605.1_ASM160760v1	-	STEC 2633
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.81336	52	-	MYWM01	335	5039	4612	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360064	GCA_002045475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/475/GCA_002045475.1_ASM204547v1	-	BCW_6261
Staphylococcus aureus M0298	1388196	PRJNA216365	216365	Terrabacteria group	Firmicutes	2.85337	32.9	-	JBUK01	66	2986	2825	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325320	GCA_000533595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/595/GCA_000533595.1_Stap_aure_M0298_V1	-	M0298
Staphylococcus aureus M0304	1388201	PRJNA216370	216370	Terrabacteria group	Firmicutes	2.86436	32.9	-	JBUL01	15	3001	2835	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325325	GCA_000533615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/615/GCA_000533615.1_Stap_aure_M0304_V1	-	M0304
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.1235	52.1	-	MYWS01	52	5286	5004	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360058	GCA_002045495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/495/GCA_002045495.1_ASM204549v1	-	BCW_6255
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.45319	50.5	-	LPXD01	189	5811	5369	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002689	GCA_001607655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/655/GCA_001607655.1_ASM160765v1	-	STEC 2746
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36549	65.6	-	COYJ01	131	4296	4078	3/22/15	3/11/17	Scaffold	SC	SAMEA1403807	GCA_001382355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/355/GCA_001382355.1_7841_6_8	-	1797E
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.088	39.9	-	CPUC01	165	2251	2075	3/23/15	3/4/17	Scaffold	SC	SAMEA682438	GCA_001131565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/565/GCA_001131565.1_5366_3_7	-	08B03741
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.058	39.7	-	CQVT01	40	2256	2038	3/23/15	3/4/17	Scaffold	SC	SAMEA1025594	GCA_001131745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/745/GCA_001131745.1_6710_8_23	-	SMRU1415
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35489	65.6	-	COYG01	115	4283	4080	3/22/15	3/12/17	Scaffold	SC	SAMEA1403808	GCA_001382375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/375/GCA_001382375.1_7841_6_47	-	1890F
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.36608	50.3	-	LPXF01	177	5754	5333	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002691	GCA_001607735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/735/GCA_001607735.1_ASM160773v1	-	STEC 2770
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.49226	51.4	-	MYWU01	319	4669	4039	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360056	GCA_002045525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/525/GCA_002045525.1_ASM204552v1	-	BCW_6253
Staphylococcus aureus M0316	1388208	PRJNA216378	216378	Terrabacteria group	Firmicutes	2.83901	32.8	-	JBUM01	46	2982	2805	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325332	GCA_000533635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/635/GCA_000533635.1_Stap_aure_M0316_V1	-	M0316
Staphylococcus aureus M0324	1388216	PRJNA216386	216386	Terrabacteria group	Firmicutes	2.87649	32.8	-	JBUN01	49	3041	2862	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325340	GCA_000533655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/655/GCA_000533655.1_Stap_aure_M0324_V1	-	M0324
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.15023	52	-	MYWR01	106	5306	5017	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360059	GCA_002045535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/535/GCA_002045535.1_ASM204553v1	-	BCW_6256
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.08566	50.6	-	LOIR01	59	5231	4909	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002697	GCA_001607795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/795/GCA_001607795.1_ASM160779v1	-	STEC 2861
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36573	65.6	-	COST01	107	4284	4077	3/22/15	3/11/17	Scaffold	SC	SAMEA1403810	GCA_001382395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/395/GCA_001382395.1_7755_5_51	-	0799V
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10634	39.6	-	CKND01	41	2316	2075	3/21/15	3/10/17	Scaffold	SC	SAMEA1024165	GCA_001131805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/805/GCA_001131805.1_6649_8_8	-	14
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.11194	39.4	-	CLOC01	50	2365	2114	3/21/15	3/10/17	Scaffold	SC	SAMEA1028914	GCA_001131825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/825/GCA_001131825.1_6949_1_19	-	SMRU2419
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36726	65.6	-	COMT01	117	4302	4084	3/23/15	3/11/17	Scaffold	SC	SAMEA1403812	GCA_001382415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/415/GCA_001382415.1_7156_7_54	-	0967C
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.1237	50.6	-	LOIS01	67	5288	4982	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002698	GCA_001607815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/815/GCA_001607815.1_ASM160781v1	-	STEC 2894.1
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.12246	52.1	-	MYWT01	60	5283	4996	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360057	GCA_002045565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/565/GCA_002045565.1_ASM204556v1	-	BCW_6254
Staphylococcus aureus M0354	1388234	PRJNA216404	216404	Terrabacteria group	Firmicutes	2.8825	32.8	-	JBUO01	45	3038	2866	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325358	GCA_000533675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/675/GCA_000533675.1_Stap_aure_M0354_V1	-	M0354
Staphylococcus aureus M0358	1388238	PRJNA216408	216408	Terrabacteria group	Firmicutes	2.85718	32.8	-	JBUP01	40	3013	2850	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325362	GCA_000533695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/695/GCA_000533695.1_Stap_aure_M0358_V1	-	M0358
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.88639	52.2	-	MYXA01	81	5020	4748	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360049	GCA_002045585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/585/GCA_002045585.1_ASM204558v1	-	BCW_6245
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.17852	50.5	-	LOIW01	138	5484	5065	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002702	GCA_001607895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/895/GCA_001607895.1_ASM160789v1	-	STEC 2953
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38127	65.6	-	COYE01	117	4322	4118	3/23/15	3/11/17	Scaffold	SC	SAMEA1403813	GCA_001382435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/435/GCA_001382435.1_7841_6_44	-	type strain: 1879
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.18942	39.5	-	CPTJ01	67	2416	2190	3/23/15	3/10/17	Scaffold	SC	SAMEA682267	GCA_001131865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/865/GCA_001131865.1_5390_1_8	-	spnIC2
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.06547	39.7	-	CLWM01	55	2271	2029	3/21/15	3/10/17	Scaffold	SC	SAMEA1026257	GCA_001131925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/925/GCA_001131925.1_6983_4_91	-	SMRU2299
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37288	65.6	-	COPU01	116	4313	4085	3/23/15	3/12/17	Scaffold	SC	SAMEA1403815	GCA_001382455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/455/GCA_001382455.1_7755_2_8	-	0125M
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.19442	50.7	-	LPXE01	162	5470	5101	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002703	GCA_001607915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/915/GCA_001607915.1_ASM160791v1	-	STEC 2954
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.88452	52.2	-	MYXB01	79	5019	4747	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360048	GCA_002045605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/605/GCA_002045605.1_ASM204560v1	-	BCW_6244
Staphylococcus aureus M0366	1388243	PRJNA216413	216413	Terrabacteria group	Firmicutes	2.89174	32.8	-	JBUQ01	58	3058	2878	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325367	GCA_000533715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/715/GCA_000533715.1_Stap_aure_M0366_V1	-	M0366
Staphylococcus aureus M0370	1388246	PRJNA216416	216416	Terrabacteria group	Firmicutes	2.89902	32.9	-	JBUR01	24	3048	2893	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325370	GCA_000533735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/735/GCA_000533735.1_Stap_aure_M0370_V1	-	M0370
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.39492	51.7	-	MYXF01	1425	5655	5010	3/20/17	4/11/17	Contig	University of California at Davis	SAMN03360043	GCA_002045615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/615/GCA_002045615.1_ASM204561v1	-	BCW_6239
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.53748	50.6	-	LOIY01	201	5909	5491	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002705	GCA_001607955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/955/GCA_001607955.1_ASM160795v1	-	STEC 2980
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36664	65.6	-	COQD01	102	4289	4093	3/23/15	3/11/17	Scaffold	SC	SAMEA1403816	GCA_001382475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/475/GCA_001382475.1_7755_3_54	-	0364X
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	1.98034	39.8	-	CPRQ01	49	2159	1952	3/23/15	3/10/17	Scaffold	SC	SAMEA770051	GCA_001131945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/945/GCA_001131945.1_5310_1_1	-	3-Feb
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.22416	39.5	-	CPKZ01	93	2471	2220	3/23/15	3/10/17	Scaffold	SC	SAMEA1408313	GCA_001131985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/985/GCA_001131985.1_7444_8_15	-	9703+24150
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36773	65.6	-	COSV01	109	4284	4075	3/22/15	3/12/17	Scaffold	SC	SAMEA1403817	GCA_001382495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/495/GCA_001382495.1_7755_5_52	-	0802Y
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.11645	50.4	-	LOGP01	82	5349	5013	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002656	GCA_001608125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/125/GCA_001608125.1_ASM160812v1	-	STEC 1528
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80247	52	-	MYXC01	86	4913	4644	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360046	GCA_002045645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/645/GCA_002045645.1_ASM204564v1	-	BCW_6242
Staphylococcus aureus M0389	1388259	PRJNA216429	216429	Terrabacteria group	Firmicutes	2.87865	32.8	-	JBUS01	46	3037	2872	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325383	GCA_000533755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/755/GCA_000533755.1_Stap_aure_M0389_V1	-	M0389
Staphylococcus aureus M0394	1388261	PRJNA216431	216431	Terrabacteria group	Firmicutes	2.8509	32.9	-	JBUT01	47	3007	2826	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325385	GCA_000533775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/775/GCA_000533775.1_Stap_aure_M0394_V1	-	M0394
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.78468	52.1	-	MYXH01	111	4889	4603	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360041	GCA_002045665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/665/GCA_002045665.1_ASM204566v1	-	BCW_6237
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.31434	50.8	-	LOFX01	116	5666	5275	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002637	GCA_001608185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/185/GCA_001608185.1_ASM160818v1	-	STEC 1188
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36617	65.6	-	COYI01	111	4291	4094	3/23/15	3/11/17	Scaffold	SC	SAMEA1403818	GCA_001382515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/515/GCA_001382515.1_7841_6_6	-	1780L
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14904	39.7	-	CKNK01	54	2360	2119	3/21/15	3/10/17	Scaffold	SC	SAMEA1023793	GCA_001132025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/025/GCA_001132025.1_6664_1_23	-	33B
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.17705	39.5	-	CPNG01	258	2363	2159	3/23/15	3/10/17	Scaffold	SC	SAMEA682264	GCA_001132205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/205/GCA_001132205.1_5390_1_1	-	spnIC42
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36589	65.6	-	COMU01	92	4283	4088	3/22/15	3/11/17	Scaffold	SC	SAMEA1403819	GCA_001382535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/535/GCA_001382535.1_7156_7_55	-	0977N
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.51294	50.6	-	LOIZ01	210	5943	5497	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002706	GCA_001608245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/245/GCA_001608245.1_ASM160824v1	-	STEC 3031
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.52828	52.2	-	MYXJ01	42	4570	4332	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360039	GCA_002045675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/675/GCA_002045675.1_ASM204567v1	-	BCW_6235
Staphylococcus aureus M0397	1388262	PRJNA216432	216432	Terrabacteria group	Firmicutes	2.86621	32.9	-	JBUU01	8	3002	2847	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325386	GCA_000533795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/795/GCA_000533795.1_Stap_aure_M0397_V1	-	M0397
Staphylococcus aureus M0410	1388271	PRJNA216441	216441	Terrabacteria group	Firmicutes	2.89967	32.9	-	JBUV01	45	3055	2872	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325395	GCA_000533815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/815/GCA_000533815.1_Stap_aure_M0410_V1	-	M0410
Salmonella enterica subsp. enterica serovar Monschaui	29480	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7401	52.1	-	MYXW01	64	4777	4530	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265059	GCA_002045705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/705/GCA_002045705.1_ASM204570v1	-	91-0516
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.24234	50.7	-	LNFU01	92	5556	5204	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002601	GCA_001608315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/315/GCA_001608315.1_ASM160831v1	-	STEC 29
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36856	65.6	-	COMV01	105	4285	4076	3/23/15	3/11/17	Scaffold	SC	SAMEA1403821	GCA_001382555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/555/GCA_001382555.1_7156_7_56	-	0978P
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11257	39.7	-	CKQV01	37	2298	2054	3/21/15	3/10/17	Scaffold	SC	SAMEA1024803	GCA_001132225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/225/GCA_001132225.1_6680_6_9	-	SMRU945
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.15316	39.8	-	CLUO01	75	2396	2156	3/21/15	3/10/17	Scaffold	SC	SAMEA1025701	GCA_001132345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/345/GCA_001132345.1_6983_2_18	-	SMRU2226
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36807	65.6	-	COPZ01	106	4295	4074	3/23/15	3/11/17	Scaffold	SC	SAMEA1403822	GCA_001382575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/575/GCA_001382575.1_7755_2_9	-	0126N
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.33965	50.7	-	LPUI01	251	5758	5296	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002708	GCA_001609215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/215/GCA_001609215.1_ASM160921v1	-	STEC 3055
Salmonella enterica subsp. enterica serovar Ibadan	1967646	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.71487	52	-	MYXY01	736	4625	4354	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265012	GCA_002045725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/725/GCA_002045725.1_ASM204572v1	-	65-5060
Staphylococcus aureus M0429	1388285	PRJNA216455	216455	Terrabacteria group	Firmicutes	2.85858	32.8	-	JBUW01	70	3033	2848	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325409	GCA_000533835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/835/GCA_000533835.1_Stap_aure_M0429_V1	-	M0429
Staphylococcus aureus M0434	1388289	PRJNA216459	216459	Terrabacteria group	Firmicutes	2.87915	32.8	-	JBUX01	50	3046	2860	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325413	GCA_000533855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/855/GCA_000533855.1_Stap_aure_M0434_V1	-	M0434
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.1379	52	-	MYXK01	75	5330	5040	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360038	GCA_002045735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/735/GCA_002045735.1_ASM204573v1	-	BCW_6234
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.48089	50.6	-	LPUH01	185	5861	5440	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002707	GCA_001609235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/235/GCA_001609235.1_ASM160923v1	-	STEC 3039
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36071	65.6	-	COVI01	106	4286	4082	3/22/15	3/11/17	Scaffold	SC	SAMEA1403823	GCA_001382595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/595/GCA_001382595.1_7769_7_39	-	1422X
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.06849	39.6	-	CLFQ01	84	2249	1997	3/21/15	3/10/17	Scaffold	SC	SAMEA1026062	GCA_001132365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/365/GCA_001132365.1_6899_7_5	-	SMRU2093
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.2117	39.6	-	CPRZ01	101	2451	2202	3/23/15	3/10/17	Scaffold	SC	SAMEA1408314	GCA_001132385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/385/GCA_001132385.1_7444_8_42	-	0003+13150
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36765	65.6	-	COXH01	114	4303	4081	3/23/15	3/11/17	Scaffold	SC	SAMEA1403824	GCA_001382615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/615/GCA_001382615.1_7841_6_12	-	type strain: 1810
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	4.91766	50.8	-	LPUM01	85	5104	4819	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002712	GCA_001609295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/295/GCA_001609295.1_ASM160929v1	-	STEC 3098
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.25687	52	-	MYXQ01	92	5522	5216	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03360030	GCA_002045745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/745/GCA_002045745.1_ASM204574v1	-	BCW_6226
Staphylococcus aureus M0444	1388296	PRJNA216466	216466	Terrabacteria group	Firmicutes	2.91576	32.8	-	JBUY01	74	3110	2930	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325420	GCA_000533875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/875/GCA_000533875.1_Stap_aure_M0444_V1	-	M0444
Staphylococcus aureus M0459	1388307	PRJNA216477	216477	Terrabacteria group	Firmicutes	2.85256	32.8	-	JBUZ01	40	3006	2839	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325431	GCA_000533895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/895/GCA_000533895.1_Stap_aure_M0459_V1	-	M0459
"Salmonella enterica subsp. houtenae serovar 50:g,z51:-"	1173947	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.76196	51.5	-	MYXX01	115	4796	4405	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265026	GCA_002045755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/755/GCA_002045755.1_ASM204575v1	-	74-1022
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.15918	50.4	-	LODE01	189	5515	5066	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002620	GCA_001609795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/795/GCA_001609795.1_ASM160979v1	-	STEC 565
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36834	65.6	-	COYL01	97	4294	4099	3/23/15	3/11/17	Scaffold	SC	SAMEA1403825	GCA_001382635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/635/GCA_001382635.1_7841_7_51	-	1900R
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.09404	39.5	-	CLXU01	54	2304	2064	3/21/15	3/10/17	Scaffold	SC	SAMEA1028951	GCA_001132405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/405/GCA_001132405.1_6983_6_35	-	SMRU2339
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09459	39.5	-	CJZM01	58	2258	2060	3/21/15	3/10/17	Scaffold	SC	SAMEA974677	GCA_001132485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/485/GCA_001132485.1_6259_5_14	-	10A
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36593	65.6	-	COUF01	102	4276	4091	3/22/15	3/11/17	Scaffold	SC	SAMEA1403826	GCA_001382655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/655/GCA_001382655.1_7769_7_10	-	type strain: 1189
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.30889	50.4	-	LODF01	185	5749	5237	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002621	GCA_001609815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/815/GCA_001609815.1_ASM160981v1	-	STEC 627
Salmonella enterica subsp. enterica serovar Monschaui	29480	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.06153	52	-	MYYA01	197	5143	4858	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265058	GCA_002045805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/805/GCA_002045805.1_ASM204580v1	-	06-0064
Staphylococcus aureus M0488	1388325	PRJNA216495	216495	Terrabacteria group	Firmicutes	2.86149	32.8	-	JBVA01	47	3030	2856	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325449	GCA_000533915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/915/GCA_000533915.1_Stap_aure_M0488_V1	-	M0488
Staphylococcus aureus M0495	1388328	PRJNA216498	216498	Terrabacteria group	Firmicutes	2.85681	32.9	-	JBVB01	32	3003	2842	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325452	GCA_000533935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/935/GCA_000533935.1_Stap_aure_M0495_V1	-	M0495
Salmonella enterica subsp. enterica serovar Rissen	399587	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.94592	52	-	MYYH01	87	5075	4770	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264955	GCA_002045825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/825/GCA_002045825.1_ASM204582v1	-	01-0479
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.1917	50.7	-	LODG01	63	5470	5138	4/4/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN04002622	GCA_001609835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/835/GCA_001609835.1_ASM160983v1	-	STEC 645
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36589	65.6	-	CONM01	113	4297	4079	3/22/15	3/11/17	Scaffold	SC	SAMEA1403827	GCA_001382675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/675/GCA_001382675.1_7156_7_79	-	0066Y
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.04451	39.5	-	CLLC01	71	2251	2028	3/21/15	3/10/17	Scaffold	SC	SAMEA1029010	GCA_001132505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/505/GCA_001132505.1_6938_5_11	-	SMRU2651
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11485	39.4	-	CKFG01	86	2320	2085	3/21/15	3/14/17	Scaffold	SC	SAMEA1024036	GCA_001132525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/525/GCA_001132525.1_6630_3_18	-	23F
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36703	65.6	-	COQI01	118	4302	4082	3/22/15	3/12/17	Scaffold	SC	SAMEA1403828	GCA_001382695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/695/GCA_001382695.1_7755_3_56	-	0388Y
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.30927	50.5	-	LVPB01	72	5566	5201	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376815	GCA_001614495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/495/GCA_001614495.1_ASM161449v1	-	sheep6
Salmonella enterica subsp. enterica serovar Monschaui	29480	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80994	52.2	-	MYYN01	53	4839	4580	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265057	GCA_002045845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/845/GCA_002045845.1_ASM204584v1	-	95-0422
Staphylococcus aureus M0499	1388330	PRJNA216500	216500	Terrabacteria group	Firmicutes	2.86961	32.8	-	JBVC01	56	3031	2849	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325454	GCA_000533955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/955/GCA_000533955.1_Stap_aure_M0499_V1	-	M0499
Staphylococcus aureus M0502	1388332	PRJNA216502	216502	Terrabacteria group	Firmicutes	2.89992	32.9	-	JBVD01	67	3073	2882	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325456	GCA_000533975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/975/GCA_000533975.1_Stap_aure_M0502_V1	-	M0502
Salmonella enterica subsp. enterica serovar Choleraesuis var. Kunzendorf	1630946	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.82234	52.1	-	MYYB01	91	5008	4616	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265083	GCA_002045865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/865/GCA_002045865.1_ASM204586v1	-	05-0703
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.96327	50.6	-	LVPI01	69	5204	4876	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376822	GCA_001614555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/555/GCA_001614555.1_ASM161455v1	-	sheep13
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39056	65.6	-	COSA01	96	4293	4093	3/22/15	3/12/17	Scaffold	SC	SAMEA1403829	GCA_001382715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/715/GCA_001382715.1_7755_4_28	-	0750R
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.06496	39.7	-	CRIM01	54	2263	2045	3/22/15	3/10/17	Scaffold	SC	SAMEA1025361	GCA_001132545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/545/GCA_001132545.1_6736_8_9	-	SMRU1305
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.07608	39.7	-	CMJS01	42	2297	2067	3/22/15	3/10/17	Scaffold	SC	SAMEA1026082	GCA_001132565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/565/GCA_001132565.1_7038_8_33	-	SMRU2241
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3744	65.6	-	COQG01	118	4297	4077	3/22/15	3/11/17	Scaffold	SC	SAMEA1403832	GCA_001382755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/755/GCA_001382755.1_7755_3_55	-	0370D
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.02923	50.5	-	LVLU01	80	5244	4890	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376730	GCA_001614575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/575/GCA_001614575.1_ASM161457v1	-	cattle11
Salmonella enterica subsp. enterica serovar Kintambo	1192730	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80724	52	-	MYYG01	81	4867	4588	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265039	GCA_002045875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/875/GCA_002045875.1_ASM204587v1	-	02-0163
Staphylococcus aureus M0535	1388353	PRJNA216524	216524	Terrabacteria group	Firmicutes	2.93438	32.9	-	JBVE01	31	3073	2902	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325477	GCA_000533995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/533/995/GCA_000533995.1_Stap_aure_M0535_V1	-	M0535
Staphylococcus aureus M0560	1388372	PRJNA216543	216543	Terrabacteria group	Firmicutes	2.89471	32.8	-	JBVF01	80	3083	2896	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325496	GCA_000534015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/015/GCA_000534015.1_Stap_aure_M0560_V1	-	M0560
"Salmonella enterica subsp. houtenae serovar 50:g,z51:-"	1173947	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.84161	51.5	-	MYYR01	130	4934	4527	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265024	GCA_002045905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/905/GCA_002045905.1_ASM204590v1	-	2011K-1657
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.18626	50.6	-	LVLV01	98	5446	5063	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376731	GCA_001614615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/615/GCA_001614615.1_ASM161461v1	-	cattle12
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36571	65.6	-	CONO01	110	4291	4072	3/22/15	3/11/17	Scaffold	SC	SAMEA1403833	GCA_001382775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/775/GCA_001382775.1_7156_7_80	-	0068A
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.12802	39.5	-	CKDW01	74	2348	2091	3/21/15	3/10/17	Scaffold	SC	SAMEA1023887	GCA_001132585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/585/GCA_001132585.1_6630_1_21	-	19B
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.11774	39.7	-	CMWN01	167	2232	1982	3/22/15	3/10/17	Scaffold	SC	SAMEA1022897	GCA_001132625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/625/GCA_001132625.1_5919_1_4	-	107
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36759	65.6	-	COYK01	113	4298	4087	3/23/15	3/11/17	Scaffold	SC	SAMEA1403835	GCA_001382795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/795/GCA_001382795.1_7841_7_49	-	1892H
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.21977	50.5	-	LVLW01	92	5531	5162	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376732	GCA_001614635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/635/GCA_001614635.1_ASM161463v1	-	cattle13
Salmonella enterica subsp. enterica serovar Choleraesuis var. Kunzendorf	1630946	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.73794	52.2	-	MYYT01	92	4900	4516	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265082	GCA_002045915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/915/GCA_002045915.1_ASM204591v1	-	2011K-0282
Staphylococcus aureus subsp. aureus 301-188	1453869	PRJNA236068	236068	Terrabacteria group	Firmicutes	2.76248	32.8	-	JASK01	40	2835	2673	2/3/14	3/2/17	Contig	"Geneva University Hospitals, Genomic Research Laboratory."	SAMN02593744	GCA_000534835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/835/GCA_000534835.1_Saureus301-188	24625873	301-188
Staphylococcus aureus subsp. aureus 300-169	1453870	PRJNA236068	236068	Terrabacteria group	Firmicutes	2.80801	32.7983	plasmid p300-169a:NZ_JASL01000037.1/JASL01000037.1	JASL01	37	2907	2744	2/3/14	3/2/17	Contig	"Geneva University Hospitals, Genomic Research Laboratory."	SAMN02593745	GCA_000534855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/855/GCA_000534855.1_Saureus300-169	24625873	300-169
"Salmonella enterica subsp. houtenae serovar 44:z4,z23:-"	1050193	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.60574	51.7	-	MYYV01	44	4631	4275	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265072	GCA_002045945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/945/GCA_002045945.1_ASM204594v1	-	2010K-0686
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.10583	50.8	-	LVLX01	104	5392	4977	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376733	GCA_001614665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/665/GCA_001614665.1_ASM161466v1	-	cattle14
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36165	65.6	-	COMW01	92	4269	4080	3/23/15	3/11/17	Scaffold	SC	SAMEA1403836	GCA_001382815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/815/GCA_001382815.1_7156_7_59	-	0981S
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.13771	39.8	-	CMWO01	155	2258	2001	3/23/15	3/10/17	Scaffold	SC	SAMEA1022920	GCA_001132665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/665/GCA_001132665.1_5919_1_8	-	123
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.1605	39.6	-	CMFO01	64	2388	2113	3/21/15	3/4/17	Scaffold	SC	SAMEA1028869	GCA_001132725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/725/GCA_001132725.1_7011_6_2	-	SMRU2810
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36976	65.6	-	COQF01	119	4302	4087	3/23/15	3/12/17	Scaffold	SC	SAMEA1403837	GCA_001382835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/835/GCA_001382835.1_7755_3_59	-	0397H
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.74089	50.9	-	LVLZ01	91	4909	4523	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376735	GCA_001614715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/715/GCA_001614715.1_ASM161471v1	-	cattle16
Salmonella enterica subsp. enterica serovar Corvallis	593905	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.6258	52.2	-	MYYO01	45	4647	4399	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264998	GCA_002045955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/955/GCA_002045955.1_ASM204595v1	-	95-0387
Staphylococcus aureus M0743	1388562	PRJNA216735	216735	Terrabacteria group	Firmicutes	2.88413	32.8	-	JDCI01	69	3055	2881	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325686	GCA_000534955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/955/GCA_000534955.1_Stap_aure_M0743_V1	-	M0743
Staphylococcus aureus M0832	1388608	PRJNA216781	216781	Terrabacteria group	Firmicutes	2.94459	32.9	-	JDCJ01	35	3097	2919	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325732	GCA_000534975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/975/GCA_000534975.1_Stap_aure_M0832_V1	-	M0832
Salmonella enterica subsp. enterica serovar Corvallis	593905	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80401	52	-	MYYS01	60	4869	4603	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264997	GCA_002045985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/985/GCA_002045985.1_ASM204598v1	-	2011K-1068
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.85208	50.6	-	LVMA01	64	5073	4743	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376736	GCA_001614755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/755/GCA_001614755.1_ASM161475v1	-	cattle17
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36942	65.6	-	COVF01	117	4308	4088	3/23/15	3/12/17	Scaffold	SC	SAMEA1403838	GCA_001382855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/855/GCA_001382855.1_7769_7_37	-	1414N
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.03587	39.6	-	CQVM01	68	2199	1970	3/23/15	3/6/17	Scaffold	SC	SAMEA1025455	GCA_001132845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/845/GCA_001132845.1_6710_7_7	-	SMRU1375
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.02686	39.7	-	CKWY01	38	2225	1984	3/21/15	3/4/17	Scaffold	SC	SAMEA1025809	GCA_001133045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/045/GCA_001133045.1_6823_6_13	-	SMRU1981
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36563	65.6	-	COYM01	121	4292	4075	3/22/15	3/11/17	Scaffold	SC	SAMEA1403840	GCA_001382875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/875/GCA_001382875.1_7841_6_9	-	1798F
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.37235	50.4	-	LVMC01	101	5696	5271	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376738	GCA_001614795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/795/GCA_001614795.1_ASM161479v1	-	cattle19
Salmonella enterica subsp. enterica serovar Kintambo	1192730	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.97268	52	-	MYYU01	106	5036	4744	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265038	GCA_002045995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/045/995/GCA_002045995.1_ASM204599v1	-	2010K-2376
Staphylococcus aureus M0846	1388620	PRJNA216793	216793	Terrabacteria group	Firmicutes	2.85653	32.8	-	JDCK01	58	3025	2854	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325744	GCA_000534995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/534/995/GCA_000534995.1_Stap_aure_M0846_V1	-	M0846
Staphylococcus aureus M0848	1388621	PRJNA216794	216794	Terrabacteria group	Firmicutes	2.85845	32.8	-	JDCL01	36	3010	2839	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325745	GCA_000535015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/015/GCA_000535015.1_Stap_aure_M0848_V1	-	M0848
Salmonella enterica subsp. enterica serovar Ealing	1962638	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72574	52.1	-	MYZN01	42	4771	4533	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264883	GCA_002046005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/005/GCA_002046005.1_ASM204600v1	-	89-0403
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.16185	50.4	-	LVPE01	59	5440	5078	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376818	GCA_001614825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/825/GCA_001614825.1_ASM161482v1	-	sheep9
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36551	65.6	-	COMY01	109	4284	4075	3/23/15	3/12/17	Scaffold	SC	SAMEA1403841	GCA_001382895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/895/GCA_001382895.1_7156_7_60	-	0987Z
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12391	39.6	-	CMBE01	47	2348	2123	3/21/15	3/4/17	Scaffold	SC	SAMEA1029024	GCA_001133125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/125/GCA_001133125.1_7004_6_47	-	SMRU2855
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.02115	39.8	-	CMHN01	48	2222	2007	3/22/15	3/4/17	Scaffold	SC	SAMEA1029235	GCA_001133145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/145/GCA_001133145.1_7038_5_5	-	SMRU2957
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36296	65.6	-	COQH01	117	4285	4073	3/23/15	3/11/17	Scaffold	SC	SAMEA1403842	GCA_001382915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/915/GCA_001382915.1_7755_3_58	-	0395F
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.07042	50.6	-	LVMG01	285	5458	4879	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376742	GCA_001614875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/875/GCA_001614875.1_ASM161487v1	-	swine4
"Salmonella enterica subsp. houtenae serovar 50:z4,z23:-"	1967612	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.59823	51.7	-	MYZQ01	130	4581	4227	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265030	GCA_002046045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/045/GCA_002046045.1_ASM204604v1	-	63-2049
Staphylococcus aureus M0854	1388626	PRJNA216799	216799	Terrabacteria group	Firmicutes	2.91099	32.9	-	JDCM01	60	3093	2903	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325750	GCA_000535035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/035/GCA_000535035.1_Stap_aure_M0854_V1	-	M0854
Staphylococcus aureus M0857	1388628	PRJNA216801	216801	Terrabacteria group	Firmicutes	2.83494	32.8	-	JDCN01	37	2967	2813	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325752	GCA_000535055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/055/GCA_000535055.1_Stap_aure_M0857_V1	-	M0857
Salmonella enterica subsp. enterica serovar Eastbourne	486993	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.77066	51.9	-	MYZS01	52	4895	4612	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264887	GCA_002046055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/055/GCA_002046055.1_ASM204605v1	-	76-0545
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.07918	50.4	-	LVPJ01	52	5328	4976	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376823	GCA_001614885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/885/GCA_001614885.1_ASM161488v1	-	sheep14
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37207	65.6	-	COPP01	95	4287	4098	3/23/15	3/11/17	Scaffold	SC	SAMEA1403845	GCA_001382935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/935/GCA_001382935.1_7755_2_4	-	0105Q
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.04538	39.7	-	CPRX01	73	2218	2029	3/23/15	3/4/17	Scaffold	SC	SAMEA770009	GCA_001133185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/185/GCA_001133185.1_5192_8_9	-	17F/1
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.07967	39.7	-	CPME01	91	2269	2093	3/22/15	3/4/17	Scaffold	SC	SAMEA682283	GCA_001133245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/245/GCA_001133245.1_5381_2_8	-	09B05541
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3677	65.6	-	COXG01	103	4301	4084	3/23/15	3/12/17	Scaffold	SC	SAMEA1403847	GCA_001382955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/955/GCA_001382955.1_7841_6_10	-	1802K
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.33303	50.5	-	LVPA01	103	5593	5223	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376814	GCA_001614905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/905/GCA_001614905.1_ASM161490v1	-	sheep5
Salmonella enterica subsp. enterica serovar Meleagridis	486999	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.76515	52.1	-	MYZG01	49	4829	4556	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264924	GCA_002046085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/085/GCA_002046085.1_ASM204608v1	-	06-0711
Staphylococcus aureus M0867	1388644	PRJNA216817	216817	Terrabacteria group	Firmicutes	2.87325	32.9	-	JDCO01	29	3013	2840	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325768	GCA_000535075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/075/GCA_000535075.1_Stap_aure_M0867_V1	-	M0867
Staphylococcus aureus M0870	1388647	PRJNA216820	216820	Terrabacteria group	Firmicutes	2.85055	32.8	-	JDCP01	48	3010	2842	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325771	GCA_000535095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/095/GCA_000535095.1_Stap_aure_M0870_V1	-	M0870
"Salmonella enterica subsp. houtenae serovar 50:z4,z23:-"	1967612	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.57262	51.7	-	MYZO01	88	4544	4185	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265031	GCA_002046095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/095/GCA_002046095.1_ASM204609v1	-	81-2335
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.00587	50.7	-	LVOV01	66	5204	4892	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376809	GCA_001614975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/975/GCA_001614975.1_ASM161497v1	-	swine72
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36766	65.6	-	COSD01	105	4283	4081	3/22/15	3/11/17	Scaffold	SC	SAMEA1403850	GCA_001382995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/382/995/GCA_001382995.1_7755_4_31	-	0754W
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.18294	39.5	-	CPSR01	72	2398	2187	3/22/15	3/4/17	Scaffold	SC	SAMEA682308	GCA_001133265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/265/GCA_001133265.1_5392_5_10	-	spnIC49
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.02305	39.7	-	CLTB01	52	2206	1997	3/21/15	3/10/17	Scaffold	SC	SAMEA1028699	GCA_001133465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/465/GCA_001133465.1_6972_4_20	-	SMRU2612
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36709	65.6	-	COQY01	96	4283	4082	3/22/15	3/12/17	Scaffold	SC	SAMEA1403852	GCA_001383035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/035/GCA_001383035.1_7755_3_81	-	0529B
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.24515	50.4	-	LVPG01	114	5598	5233	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376820	GCA_001615035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/035/GCA_001615035.1_ASM161503v1	-	sheep11
Salmonella enterica subsp. enterica serovar Alachua	913240	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.92479	52.1	-	MYZU01	75	5080	4796	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264979	GCA_002046115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/115/GCA_002046115.1_ASM204611v1	-	85-0191
Staphylococcus aureus M0873	1388649	PRJNA216822	216822	Terrabacteria group	Firmicutes	2.86218	32.8	-	JDCQ01	43	3024	2854	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325773	GCA_000535115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/115/GCA_000535115.1_Stap_aure_M0873_V1	-	M0873
Staphylococcus aureus M0882	1388656	PRJNA216829	216829	Terrabacteria group	Firmicutes	2.85889	32.9	-	JDCR01	16	2992	2826	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325780	GCA_000535135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/135/GCA_000535135.1_Stap_aure_M0882_V1	-	M0882
Salmonella enterica subsp. enterica serovar Eastbourne	486993	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.37156	52.5	-	MYZV01	90	4417	4150	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264886	GCA_002046145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/145/GCA_002046145.1_ASM204614v1	-	69-6058
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.24794	50.6	-	LVOW01	76	5484	5121	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376810	GCA_001615225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/225/GCA_001615225.1_ASM161522v1	-	sheep1
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38934	65.6	-	COPH01	111	4326	4108	3/22/15	3/12/17	Scaffold	SC	SAMEA1403853	GCA_001383055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/055/GCA_001383055.1_7755_2_32	-	0268S
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.19913	39.5	-	CLEG01	65	2432	2191	3/21/15	3/10/17	Scaffold	SC	SAMEA1026154	GCA_001133545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/545/GCA_001133545.1_6899_6_1	-	SMRU2065
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.05758	39.6	-	CKSC01	38	2258	2006	3/21/15	3/10/17	Scaffold	SC	SAMEA1025154	GCA_001133685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/685/GCA_001133685.1_6710_6_11	-	SMRU1355
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36917	65.6	-	CIDW01	99	4288	4092	4/21/15	3/11/17	Scaffold	SC	SAMEA1403854	GCA_001383075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/075/GCA_001383075.1_7755_5_68	-	0875C
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.85989	50.7	-	LVOY01	52	5043	4753	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376812	GCA_001615325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/325/GCA_001615325.1_ASM161532v1	-	sheep3
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.25025	51.8	-	MZAB01	841	5424	4954	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03359955	GCA_002046165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/165/GCA_002046165.1_ASM204616v1	-	BCW_6138
Staphylococcus aureus M0886	1388660	PRJNA216833	216833	Terrabacteria group	Firmicutes	2.87874	32.9	-	JDCS01	15	3007	2847	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325784	GCA_000535155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/155/GCA_000535155.1_Stap_aure_M0886_V1	-	M0886
Staphylococcus aureus M0888	1388662	PRJNA216835	216835	Terrabacteria group	Firmicutes	2.88981	32.8	-	JDCT01	40	3057	2890	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325786	GCA_000535175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/175/GCA_000535175.1_Stap_aure_M0888_V1	-	M0888
Salmonella enterica subsp. enterica serovar Baildon	913068	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.86203	52.2	-	MZAC01	93	4986	4740	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264866	GCA_002046175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/175/GCA_002046175.1_ASM204617v1	-	03-0685
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.93185	50.8	-	LVOX01	75	5153	4833	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376811	GCA_001615495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/495/GCA_001615495.1_ASM161549v1	-	sheep2
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36792	65.6	-	COUK01	127	4303	4085	3/23/15	3/12/17	Scaffold	SC	SAMEA1403855	GCA_001383095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/095/GCA_001383095.1_7769_7_15	-	1237W
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21937	39.5	-	CPUD01	88	2469	2219	3/22/15	3/10/17	Scaffold	SC	SAMEA1408282	GCA_001133705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/705/GCA_001133705.1_7444_8_27	-	9808+20015
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.04535	39.6	-	CLOS01	64	2253	1990	3/21/15	3/10/17	Scaffold	SC	SAMEA1029057	GCA_001133785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/785/GCA_001133785.1_6949_2_12	-	SMRU2436
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3671	65.6	-	CONF01	111	4288	4085	3/22/15	3/12/17	Scaffold	SC	SAMEA1403856	GCA_001383115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/115/GCA_001383115.1_7156_7_74	-	1126A
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.96681	50.7	-	LVNE01	80	5197	4844	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376766	GCA_001615565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/565/GCA_001615565.1_ASM161556v1	-	swine28
"Salmonella enterica subsp. houtenae serovar 48:g,z51:-"	1050190	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.58103	51.6	-	MYZY01	92	4555	4212	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265021	GCA_002046205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/205/GCA_002046205.1_ASM204620v1	-	05-0382
Staphylococcus aureus M0904	1388676	PRJNA216849	216849	Terrabacteria group	Firmicutes	2.94353	32.9	-	JDCU01	31	3097	2925	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325800	GCA_000535195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/195/GCA_000535195.1_Stap_aure_M0904_V1	-	M0904
Staphylococcus aureus M0906	1388678	PRJNA216851	216851	Terrabacteria group	Firmicutes	2.86338	32.8	-	JDCV01	40	3008	2852	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325802	GCA_000535215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/215/GCA_000535215.1_Stap_aure_M0906_V1	-	M0906
Salmonella enterica subsp. enterica serovar Cubana	189201	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.90062	52	-	MZAE01	93	4991	4690	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265001	GCA_002046215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/215/GCA_002046215.1_ASM204621v1	-	03-0180
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.73806	50.6	-	LVNF01	87	4922	4603	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376767	GCA_001615595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/595/GCA_001615595.1_ASM161559v1	-	swine29
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37945	65.6	-	COLZ01	87	4298	4106	3/22/15	3/12/17	Scaffold	SC	SAMEA1403859	GCA_001383135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/135/GCA_001383135.1_7156_6_38	-	0728S
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.02944	39.4	-	CQYI01	60	2244	2022	3/23/15	3/10/17	Scaffold	SC	SAMEA1024600	GCA_001133805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/805/GCA_001133805.1_6730_3_5	-	SMRU605
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.06286	39.7	-	CLLN01	39	2262	2041	3/21/15	3/10/17	Scaffold	SC	SAMEA1029074	GCA_001133825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/825/GCA_001133825.1_6938_6_12	-	SMRU2676
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36617	65.6	-	COPG01	120	4297	4072	3/23/15	3/12/17	Scaffold	SC	SAMEA1403861	GCA_001383155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/155/GCA_001383155.1_7755_2_30	-	0259H
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.20998	50.7	-	LVNG01	122	5440	5034	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376768	GCA_001615615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/615/GCA_001615615.1_ASM161561v1	-	swine30
Salmonella enterica subsp. enterica serovar Lomalinda	1967650	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.574	52.2	-	MZAF01	188	4711	4339	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265047	GCA_002046245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/245/GCA_002046245.1_ASM204624v1	-	02-0589
Staphylococcus aureus M0921	1388692	PRJNA216865	216865	Terrabacteria group	Firmicutes	2.86196	32.9	-	JDCW01	16	2999	2835	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325816	GCA_000535235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/235/GCA_000535235.1_Stap_aure_M0921_V1	-	M0921
Staphylococcus aureus M0923	1388694	PRJNA216867	216867	Terrabacteria group	Firmicutes	2.85626	32.8	-	JDCX01	52	3026	2847	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325818	GCA_000535255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/255/GCA_000535255.1_Stap_aure_M0923_V1	-	M0923
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.06039	51.9	-	MZAG01	577	5137	4812	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03359950	GCA_002046265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/265/GCA_002046265.1_ASM204626v1	-	BCW_6132
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.80458	50.8	-	LVNI01	93	5046	4683	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376770	GCA_001615645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/645/GCA_001615645.1_ASM161564v1	-	swine32
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36781	65.6	-	COVV01	113	4290	4081	3/22/15	3/12/17	Scaffold	SC	SAMEA1403862	GCA_001383175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/175/GCA_001383175.1_7769_8_51	-	1518B
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.11867	39.7	-	CLZW01	46	2364	2143	3/21/15	3/10/17	Scaffold	SC	SAMEA1028723	GCA_001133845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/845/GCA_001133845.1_6983_8_95	-	SMRU2399
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.15596	39.5	-	CLPI01	68	2404	2179	3/21/15	3/10/17	Scaffold	SC	SAMEA1028686	GCA_001134045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/045/GCA_001134045.1_6949_3_10	-	SMRU2458
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36496	65.6	-	COSC01	116	4291	4082	3/23/15	3/12/17	Scaffold	SC	SAMEA1403863	GCA_001383195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/195/GCA_001383195.1_7755_4_32	-	0756Y
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.51445	50.8	-	LVNO01	122	4641	4308	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376776	GCA_001615775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/775/GCA_001615775.1_ASM161577v1	-	swine38
Salmonella enterica subsp. enterica serovar Lomalinda	1967650	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.61868	52.2	-	MZAH01	91	4713	4392	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265046	GCA_002046275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/275/GCA_002046275.1_ASM204627v1	-	99-0359
Staphylococcus aureus M0939	1388705	PRJNA216878	216878	Terrabacteria group	Firmicutes	2.89227	32.8	-	JDCY01	53	3062	2892	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325829	GCA_000535275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/275/GCA_000535275.1_Stap_aure_M0939_V1	-	M0939
Staphylococcus aureus M0949	1388712	PRJNA216885	216885	Terrabacteria group	Firmicutes	2.87479	32.8	-	JDCZ01	65	3065	2893	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325836	GCA_000535295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/295/GCA_000535295.1_Stap_aure_M0949_V1	-	M0949
Salmonella enterica subsp. enterica serovar Cubana	189201	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.88976	52.3	-	MZAI01	57	4970	4714	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265000	GCA_002046285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/285/GCA_002046285.1_ASM204628v1	-	98-0352
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.93418	50.6	-	LVNR01	98	5130	4772	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376779	GCA_001615835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/835/GCA_001615835.1_ASM161583v1	-	swine41
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36651	65.6	-	COTI01	100	4282	4092	3/23/15	3/12/17	Scaffold	SC	SAMEA1403864	GCA_001383215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/215/GCA_001383215.1_7755_5_69	-	0886P
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.15449	39.4	-	CLXX01	70	2372	2130	3/21/15	3/10/17	Scaffold	SC	SAMEA1028759	GCA_001134105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/105/GCA_001134105.1_6983_6_39	-	SMRU2343
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09663	39.6	-	CKSD01	50	2336	2095	3/21/15	3/10/17	Scaffold	SC	SAMEA1023916	GCA_001134145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/145/GCA_001134145.1_6680_8_24	-	SMRU216
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3779	65.6	-	COPI01	108	4296	4096	3/22/15	3/12/17	Scaffold	SC	SAMEA1403866	GCA_001383255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/255/GCA_001383255.1_7755_2_31	-	0262L
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.0603	50.6	-	LVNS01	55	5169	4857	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376780	GCA_001615855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/855/GCA_001615855.1_ASM161585v1	-	swine42
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.51516	52.2	-	MZAJ01	48	4519	4278	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03359946	GCA_002046325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/325/GCA_002046325.1_ASM204632v1	-	BCW_6128
Staphylococcus aureus M0959	1388720	PRJNA216893	216893	Terrabacteria group	Firmicutes	2.88777	32.8	-	JDDA01	67	3054	2876	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325844	GCA_000535315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/315/GCA_000535315.1_Stap_aure_M0959_V1	-	M0959
Staphylococcus aureus M0980	1392009	PRJNA217093	217093	Terrabacteria group	Firmicutes	2.88616	32.9	-	JDDB01	11	3022	2860	2/3/14	3/2/17	Contig	Broad Institute	SAMN02334617	GCA_000535335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/335/GCA_000535335.1_Stap_aure_M0980_V1	-	M0980
"Salmonella enterica subsp. houtenae serovar 48:g,z51:-"	1050190	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.62228	51.6	-	MZAK01	105	4614	4259	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265020	GCA_002046345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/345/GCA_002046345.1_ASM204634v1	-	96-0265
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.97683	50.8	-	LVNT01	53	5122	4852	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376781	GCA_001615865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/865/GCA_001615865.1_ASM161586v1	-	swine43
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36303	65.6	-	COQX01	91	4277	4083	3/23/15	3/12/17	Scaffold	SC	SAMEA1403868	GCA_001383275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/275/GCA_001383275.1_7755_3_79	-	0527Z
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.1567	39.7	-	CKGI01	52	2358	2122	3/21/15	3/10/17	Scaffold	SC	SAMEA1024085	GCA_001134185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/185/GCA_001134185.1_6631_1_23	-	6B
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.00646	39.7	-	CPPX01	63	2175	1999	3/23/15	3/4/17	Scaffold	SC	SAMEA682394	GCA_001134285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/285/GCA_001134285.1_5366_6_3	-	08B07341
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36862	65.6	-	CONK01	118	4294	4087	3/23/15	3/12/17	Scaffold	SC	SAMEA1403869	GCA_001383295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/295/GCA_001383295.1_7156_7_75	-	1127B
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.23397	50.6	-	LVNV01	109	5525	5155	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376783	GCA_001615895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/895/GCA_001615895.1_ASM161589v1	-	swine45
"Salmonella enterica subsp. houtenae serovar 50:z4,z23:-"	1967612	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.93034	51.7	-	MZAN01	93	5008	4589	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265029	GCA_002046355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/355/GCA_002046355.1_ASM204635v1	-	95-0004
Staphylococcus aureus M0981	1392010	PRJNA217094	217094	Terrabacteria group	Firmicutes	2.82605	32.9	-	JDDC01	58	2967	2800	2/3/14	3/2/17	Contig	Broad Institute	SAMN02334618	GCA_000535355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/355/GCA_000535355.1_Stap_aure_M0981_V1	-	M0981
Staphylococcus aureus M0991	1392018	PRJNA217102	217102	Terrabacteria group	Firmicutes	2.81649	32.8	-	JDDD01	38	2950	2786	2/3/14	3/2/17	Contig	Broad Institute	SAMN02334626	GCA_000535375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/375/GCA_000535375.1_Stap_aure_M0991_V1	-	M0991
Salmonella enterica subsp. enterica serovar Edinburgh	940231	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.86532	51.9	-	MZAM01	571	5325	4694	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264890	GCA_002046365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/365/GCA_002046365.1_ASM204636v1	-	95-0382
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.02865	50.7	-	LVNU01	120	5294	4942	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376782	GCA_001615955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/955/GCA_001615955.1_ASM161595v1	-	swine44
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35904	65.6	-	COUG01	103	4273	4080	3/23/15	3/12/17	Scaffold	SC	SAMEA1403870	GCA_001383315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/315/GCA_001383315.1_7769_7_12	-	1203J
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14995	39.6	-	CKIP01	88	2337	2092	3/21/15	3/4/17	Scaffold	SC	SAMEA1023996	GCA_001134305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/305/GCA_001134305.1_6631_3_9	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.21827	39.6	-	CLUE01	75	2415	2170	3/21/15	3/4/17	Scaffold	SC	SAMEA1028728	GCA_001134385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/385/GCA_001134385.1_6972_5_7	-	SMRU2623
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37052	65.6	-	COPE01	117	4295	4081	3/22/15	3/12/17	Scaffold	SC	SAMEA1403871	GCA_001383335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/335/GCA_001383335.1_7755_2_29	-	0255D
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.84426	50.6	-	LVNZ01	113	5090	4712	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376787	GCA_001615985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/985/GCA_001615985.1_ASM161598v1	-	swine49
"Salmonella enterica subsp. houtenae serovar 48:g,z51:-"	1050190	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.6606	51.6	-	MZAO01	88	4664	4316	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265019	GCA_002046405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/405/GCA_002046405.1_ASM204640v1	-	2012K-0052
Staphylococcus aureus M0992	1392019	PRJNA217103	217103	Terrabacteria group	Firmicutes	2.9051	32.8	-	JDDE01	38	3081	2901	2/3/14	3/2/17	Contig	Broad Institute	SAMN02334627	GCA_000535395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/395/GCA_000535395.1_Stap_aure_M0992_V1	-	M0992
Staphylococcus aureus M0996	1392021	PRJNA217105	217105	Terrabacteria group	Firmicutes	2.88047	32.9	-	JDDF01	12	3016	2854	2/3/14	3/2/17	Contig	Broad Institute	SAMN02334629	GCA_000535415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/415/GCA_000535415.1_Stap_aure_M0996_V1	-	M0996
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.19736	51.9	-	MZAR01	252	5357	5067	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03359938	GCA_002046415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/415/GCA_002046415.1_ASM204641v1	-	BCW_6120
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.15864	50.5	-	LVOF01	112	5462	5057	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376793	GCA_001616105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/105/GCA_001616105.1_ASM161610v1	-	swine55
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35922	65.6	-	COYN01	115	4281	4072	3/23/15	3/12/17	Scaffold	SC	SAMEA1403872	GCA_001383355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/355/GCA_001383355.1_7841_7_53	-	1903V
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08014	39.6	-	CLQT01	57	2278	2061	3/21/15	3/4/17	Scaffold	SC	SAMEA1028846	GCA_001134445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/445/GCA_001134445.1_6972_2_11	-	SMRU2555
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.16429	39.6	-	CKMV01	62	2433	2195	3/21/15	3/4/17	Scaffold	SC	SAMEA1023889	GCA_001134545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/545/GCA_001134545.1_6649_8_24	-	23A
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36351	65.6	-	CONJ01	112	4284	4083	3/23/15	3/12/17	Scaffold	SC	SAMEA1403873	GCA_001383375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/375/GCA_001383375.1_7156_7_76	-	1128C
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.98446	50.7	-	LVOG01	102	5221	4871	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376794	GCA_001616135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/135/GCA_001616135.1_ASM161613v1	-	swine56
Salmonella enterica subsp. enterica serovar Baildon	913068	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.6345	52.2	-	MZAS01	59	4684	4471	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264864	GCA_002046425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/425/GCA_002046425.1_ASM204642v1	-	2010K-1384
Staphylococcus aureus M1008	1392027	PRJNA217111	217111	Terrabacteria group	Firmicutes	2.81794	32.8	-	JDDG01	37	2980	2815	2/3/14	3/2/17	Contig	Broad Institute	SAMN02334635	GCA_000535435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/435/GCA_000535435.1_Stap_aure_M1008_V1	-	M1008
Staphylococcus aureus M1018	1392034	PRJNA217118	217118	Terrabacteria group	Firmicutes	2.87686	32.9	-	JDDH01	65	3052	2849	2/3/14	3/2/17	Contig	Broad Institute	SAMN02334642	GCA_000535455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/455/GCA_000535455.1_Stap_aure_M1018_V1	-	M1018
"Salmonella enterica subsp. houtenae serovar 50:z4,z23:-"	1967612	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.02431	51.7	-	MZAQ01	115	5120	4657	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265028	GCA_002046465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/465/GCA_002046465.1_ASM204646v1	-	2011K-1241
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.6026	50.8	-	LVOI01	51	4718	4426	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376796	GCA_001616145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/145/GCA_001616145.1_ASM161614v1	-	swine58
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36553	65.6	-	COQZ01	119	4305	4081	3/23/15	3/12/17	Scaffold	SC	SAMEA1403874	GCA_001383395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/395/GCA_001383395.1_7755_3_83	-	0532E
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.01397	39.7	-	CQXI01	35	2192	1950	3/23/15	3/6/17	Scaffold	SC	SAMEA1025016	GCA_001134565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/565/GCA_001134565.1_6730_1_21	-	SMRU597
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.23779	39.4	-	CMJE01	63	2479	2212	3/23/15	3/4/17	Scaffold	SC	SAMEA1029450	GCA_001134665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/665/GCA_001134665.1_7038_7_4	-	SMRU3004
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35961	65.6	-	CORY01	91	4275	4088	3/22/15	3/12/17	Scaffold	SC	SAMEA1403877	GCA_001383435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/435/GCA_001383435.1_7755_4_29	-	type strain: 0752
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.52506	50.3	-	LVOH01	159	6010	5559	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376795	GCA_001616175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/175/GCA_001616175.1_ASM161617v1	-	swine57
"Salmonella enterica subsp. houtenae serovar 50:z4,z23:-"	1967612	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.95203	51.7	-	MZAV01	302	5126	4553	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265027	GCA_002046485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/485/GCA_002046485.1_ASM204648v1	-	2009K0371
Staphylococcus aureus M1024	1392039	PRJNA217123	217123	Terrabacteria group	Firmicutes	2.88496	32.8	-	JDDI01	79	3079	2881	2/3/14	3/2/17	Contig	Broad Institute	SAMN02334647	GCA_000535475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/475/GCA_000535475.1_Stap_aure_M1024_V1	-	M1024
Staphylococcus aureus M1028	1392043	PRJNA217127	217127	Terrabacteria group	Firmicutes	2.9323	32.9	-	JDDJ01	65	3073	2898	2/3/14	3/2/17	Contig	Broad Institute	SAMN02334651	GCA_000535495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/495/GCA_000535495.1_Stap_aure_M1028_V1	-	M1028
Salmonella enterica subsp. enterica serovar Baildon	913068	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.68745	52.2	-	MZAW01	61	4751	4532	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264863	GCA_002046495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/495/GCA_002046495.1_ASM204649v1	-	08-1674
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.75209	50.6	-	LVOK01	84	4958	4629	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376798	GCA_001616195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/195/GCA_001616195.1_ASM161619v1	-	swine60
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37171	65.6	-	COVW01	114	4282	4086	3/23/15	3/12/17	Scaffold	SC	SAMEA1403878	GCA_001383455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/455/GCA_001383455.1_7769_8_54	-	1550L
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.12861	39.7	-	CMSZ01	75	2276	1985	3/23/15	3/6/17	Scaffold	SC	SAMEA1022835	GCA_001134705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/705/GCA_001134705.1_5737_1_11	-	373
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.99055	39.8	-	CKER01	95	2192	1931	3/21/15	3/9/17	Scaffold	SC	SAMEA1024141	GCA_001134765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/765/GCA_001134765.1_6630_2_6	-	3
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36144	65.6	-	COMO01	103	4285	4088	3/22/15	3/12/17	Scaffold	SC	SAMEA1403880	GCA_001383475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/475/GCA_001383475.1_7156_6_9	-	1071Q
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.61758	50.6	-	LVOL01	152	6058	5579	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376799	GCA_001616215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/215/GCA_001616215.1_ASM161621v1	-	swine61
Salmonella enterica subsp. enterica serovar Lomalinda	1967650	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.58116	52.2	-	MZAU01	102	4688	4353	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265045	GCA_002046525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/525/GCA_002046525.1_ASM204652v1	-	2010K-0199
Staphylococcus aureus M1029	1392044	PRJNA217128	217128	Terrabacteria group	Firmicutes	2.9321	32.9	-	JDDK01	33	3099	2928	2/3/14	3/2/17	Contig	Broad Institute	SAMN02334652	GCA_000535515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/515/GCA_000535515.1_Stap_aure_M1029_V1	-	M1029
Staphylococcus aureus M1039	1392049	PRJNA217133	217133	Terrabacteria group	Firmicutes	2.86748	32.8	-	JDDL01	40	3026	2872	2/3/14	3/2/17	Contig	Broad Institute	SAMN02334657	GCA_000535535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/535/GCA_000535535.1_Stap_aure_M1039_V1	-	M1039
Salmonella enterica subsp. enterica serovar Alachua	913240	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.81705	52.2	-	MZAX01	32	4897	4638	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264976	GCA_002046535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/535/GCA_002046535.1_ASM204653v1	-	08-1229
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.85171	50.5	-	LVOM01	77	5060	4726	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376800	GCA_001616255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/255/GCA_001616255.1_ASM161625v1	-	swine62
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3715	65.6	-	COTL01	94	4282	4074	3/22/15	3/12/17	Scaffold	SC	SAMEA1403883	GCA_001383515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/515/GCA_001383515.1_7755_5_72	-	0889S
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.01115	39.6	-	CMOZ01	44	2217	2006	3/23/15	3/4/17	Scaffold	SC	SAMEA2061470	GCA_001134805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/805/GCA_001134805.1_9803_7_5	-	35F
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08259	39.7	-	CLEB01	74	2300	2083	3/21/15	3/10/17	Scaffold	SC	SAMEA1026113	GCA_001134865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/865/GCA_001134865.1_6899_6_14	-	SMRU2078
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39117	65.6	-	CONL01	100	4289	4087	3/22/15	3/12/17	Scaffold	SC	SAMEA1403885	GCA_001383535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/535/GCA_001383535.1_7156_7_78	-	1137M
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.96156	50.8	-	LVON01	59	5182	4885	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376801	GCA_001616275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/275/GCA_001616275.1_ASM161627v1	-	swine63
"Salmonella enterica subsp. houtenae serovar 48:g,z51:-"	1050190	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.75995	51.6	-	MZBB01	72	4749	4410	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265018	GCA_002046565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/565/GCA_002046565.1_ASM204656v1	-	07-0047
Staphylococcus aureus M1047	1392054	PRJNA217138	217138	Terrabacteria group	Firmicutes	2.91254	32.9	-	JDDM01	51	3102	2933	2/3/14	3/2/17	Contig	Broad Institute	SAMN02334662	GCA_000535555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/555/GCA_000535555.1_Stap_aure_M1047_V1	-	M1047
Staphylococcus aureus M1051	1392058	PRJNA217142	217142	Terrabacteria group	Firmicutes	2.9297	32.9	-	JDDN01	84	3114	2916	2/3/14	3/2/17	Contig	Broad Institute	SAMN02334666	GCA_000535575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/575/GCA_000535575.1_Stap_aure_M1051_V1	-	M1051
Salmonella enterica subsp. enterica serovar Albany	211968	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.79969	52.1	-	MZBF01	62	4865	4632	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264984	GCA_002046575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/575/GCA_002046575.1_ASM204657v1	-	74-2811
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.22514	50.7	-	LVOO01	109	5454	5055	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376802	GCA_001616285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/285/GCA_001616285.1_ASM161628v1	-	swine64
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36311	65.6	-	COMC01	115	4276	4086	3/23/15	3/12/17	Scaffold	SC	SAMEA1403886	GCA_001383555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/555/GCA_001383555.1_7156_6_36	-	0716E
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.15937	39.5	-	CKXF01	50	2388	2154	3/21/15	3/11/17	Scaffold	SC	SAMEA1026225	GCA_001134925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/925/GCA_001134925.1_6823_6_19	-	SMRU1987
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.14756	39.7	-	CKWR01	85	2319	2076	3/21/15	3/10/17	Scaffold	SC	SAMEA1026009	GCA_001134965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/965/GCA_001134965.1_6823_6_10	-	SMRU1978
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36451	65.6	-	COWA01	114	4305	4087	3/23/15	3/12/17	Scaffold	SC	SAMEA1403892	GCA_001383595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/595/GCA_001383595.1_7769_8_57	-	1570H
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.86995	50.6	-	LVOQ01	67	4968	4645	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376804	GCA_001616335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/335/GCA_001616335.1_ASM161633v1	-	swine66
Salmonella enterica subsp. enterica serovar Edinburgh	940231	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.54593	52.2	-	MZAZ01	74	4622	4358	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264888	GCA_002046605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/605/GCA_002046605.1_ASM204660v1	-	07-0842
Staphylococcus aureus M1055	1392061	PRJNA217145	217145	Terrabacteria group	Firmicutes	2.87028	32.8	-	JDDO01	58	3030	2867	2/3/14	3/2/17	Contig	Broad Institute	SAMN02334669	GCA_000535595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/595/GCA_000535595.1_Stap_aure_M1055_V1	-	M1055
Staphylococcus aureus M1057	1392063	PRJNA217147	217147	Terrabacteria group	Firmicutes	2.83632	32.8	-	JDDP01	41	2984	2813	2/3/14	3/2/17	Contig	Broad Institute	SAMN02334671	GCA_000535615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/615/GCA_000535615.1_Stap_aure_M1057_V1	-	M1057
Salmonella enterica subsp. enterica serovar Agbeni	1967642	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.59156	52.1	-	MZBE01	66	4603	4358	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264975	GCA_002046615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/615/GCA_002046615.1_ASM204661v1	-	86-0039
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.38684	50.3	-	LVOS01	127	5867	5425	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376806	GCA_001616375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/375/GCA_001616375.1_ASM161637v1	-	swine68
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36222	65.6	-	COTO01	115	4288	4085	3/22/15	3/12/17	Scaffold	SC	SAMEA1403893	GCA_001383615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/615/GCA_001383615.1_7755_5_73	-	0899D
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04351	39.6	-	CKDI01	80	2265	2036	3/21/15	3/10/17	Scaffold	SC	SAMEA1024015	GCA_001135165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/165/GCA_001135165.1_6630_1_1	-	35F
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.05232	39.6	-	CKMT01	67	2274	2064	3/21/15	3/11/17	Scaffold	SC	SAMEA1023750	GCA_001135205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/205/GCA_001135205.1_6649_8_15	-	11A
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37423	65.6	-	COSG01	99	4292	4081	3/23/15	3/12/17	Scaffold	SC	SAMEA1403895	GCA_001383655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/655/GCA_001383655.1_7755_4_36	-	0772Q
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.87514	50.6	-	LVOT01	82	5032	4701	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376807	GCA_001616385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/385/GCA_001616385.1_ASM161638v1	-	swine70
Salmonella enterica subsp. enterica serovar Worthington	1160769	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.91476	52.2	-	MZBH01	66	4997	4733	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264972	GCA_002046645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/645/GCA_002046645.1_ASM204664v1	-	77-0760
Staphylococcus aureus M1065	1392066	PRJNA217150	217150	Terrabacteria group	Firmicutes	2.85117	32.8	-	JDDQ01	54	3027	2844	2/3/14	3/2/17	Contig	Broad Institute	SAMN02334674	GCA_000535635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/635/GCA_000535635.1_Stap_aure_M1065_V1	-	M1065
Staphylococcus aureus M1071	1392071	PRJNA217155	217155	Terrabacteria group	Firmicutes	2.8666	32.8	-	JDDR01	55	3020	2844	2/3/14	3/2/17	Contig	Broad Institute	SAMN02334679	GCA_000535655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/655/GCA_000535655.1_Stap_aure_M1071_V1	-	M1071
Salmonella enterica subsp. enterica serovar Grumpensis	260681	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.60115	52.2	-	MZBI01	88	4656	4392	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264901	GCA_002046655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/655/GCA_002046655.1_ASM204665v1	-	74-1758
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.24458	50.5	-	LVOU01	145	5551	5126	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376808	GCA_001616415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/415/GCA_001616415.1_ASM161641v1	-	swine71
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36479	65.6	-	COQV01	112	4291	4081	3/23/15	3/12/17	Scaffold	SC	SAMEA1403896	GCA_001383675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/675/GCA_001383675.1_7755_3_76	-	0518P
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.05948	39.8	-	CPSO01	210	2231	2037	3/23/15	3/11/17	Scaffold	SC	SAMEA682496	GCA_001135225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/225/GCA_001135225.1_5366_7_5	-	08B10767
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.17028	39.7	-	CKQF01	50	2376	2150	3/21/15	3/11/17	Scaffold	SC	SAMEA1024598	GCA_001135545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/545/GCA_001135545.1_6680_6_12	-	SMRU948
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3826	65.6	-	COOR01	85	4309	4114	3/22/15	3/12/17	Scaffold	SC	SAMEA1403897	GCA_001383695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/695/GCA_001383695.1_7755_2_10	-	0128Q
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.10418	50.6	-	LVPK01	74	5400	5051	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376824	GCA_001616435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/435/GCA_001616435.1_ASM161643v1	-	sheep15
Salmonella enterica subsp. enterica serovar Indiana	286783	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89803	52.1	-	MZBM01	77	4991	4739	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265016	GCA_002046685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/685/GCA_002046685.1_ASM204668v1	-	73-2927
Staphylococcus aureus M1073	1392072	PRJNA217156	217156	Terrabacteria group	Firmicutes	2.84991	32.8	-	JDDS01	65	3001	2819	2/3/14	3/2/17	Contig	Broad Institute	SAMN02334680	GCA_000535675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/675/GCA_000535675.1_Stap_aure_M1073_V1	-	M1073
Staphylococcus aureus M1075	1392074	PRJNA217158	217158	Terrabacteria group	Firmicutes	2.78798	32.8	-	JDDT01	40	2900	2728	2/3/14	3/2/17	Contig	Broad Institute	SAMN02334682	GCA_000535695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/695/GCA_000535695.1_Stap_aure_M1075_V1	-	M1075
Salmonella enterica subsp. enterica serovar Grumpensis	260681	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.54975	52.2	-	MZBJ01	102	4622	4333	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264900	GCA_002046695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/695/GCA_002046695.1_ASM204669v1	-	63-0359
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.95236	50.8	-	LVPL01	55	5122	4833	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376825	GCA_001616455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/455/GCA_001616455.1_ASM161645v1	-	sheep16
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36994	65.6	-	COVZ01	117	4297	4081	3/23/15	3/12/17	Scaffold	SC	SAMEA1403898	GCA_001383715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/715/GCA_001383715.1_7769_8_56	-	1552N
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.00768	39.7	-	CLPM01	38	2195	1983	3/21/15	3/11/17	Scaffold	SC	SAMEA1028924	GCA_001135565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/565/GCA_001135565.1_6949_3_19	-	SMRU2467
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.04049	39.6	-	CKOY01	68	2272	2054	3/21/15	3/11/17	Scaffold	SC	SAMEA1024692	GCA_001135625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/625/GCA_001135625.1_6680_4_17	-	35F
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38604	65.6	-	COTM01	93	4305	4102	3/22/15	3/12/17	Scaffold	SC	SAMEA1403899	GCA_001383735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/735/GCA_001383735.1_7755_5_74	-	0902G
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.08717	50.5	-	LVPM01	58	5265	4929	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376826	GCA_001616475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/475/GCA_001616475.1_ASM161647v1	-	sheep17
Salmonella enterica subsp. enterica serovar Chester	149386	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.86613	52.1	-	MZBN01	60	5032	4756	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264879	GCA_002046725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/725/GCA_002046725.1_ASM204672v1	-	84-1315
Staphylococcus aureus M1097	1392089	PRJNA217173	217173	Terrabacteria group	Firmicutes	2.90703	32.9	-	JDDU01	58	3084	2891	2/3/14	3/2/17	Contig	Broad Institute	SAMN02334697	GCA_000535715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/715/GCA_000535715.1_Stap_aure_M1097_V1	-	M1097
Staphylococcus aureus M1099	1392090	PRJNA217174	217174	Terrabacteria group	Firmicutes	2.90989	32.9	-	JDDV01	66	3091	2892	2/3/14	3/2/17	Contig	Broad Institute	SAMN02334698	GCA_000535735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/735/GCA_000535735.1_Stap_aure_M1099_V1	-	M1099
Salmonella enterica subsp. enterica serovar Worthington	1160769	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.86582	52.2	-	MZBO01	70	4962	4702	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265079	GCA_002046735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/735/GCA_002046735.1_ASM204673v1	-	06-0153
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.01255	50.7	-	LVPN01	54	5210	4911	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376827	GCA_001616495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/495/GCA_001616495.1_ASM161649v1	-	sheep18
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36577	65.6	-	COLY01	103	4288	4090	3/23/15	3/12/17	Scaffold	SC	SAMEA1403902	GCA_001383775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/775/GCA_001383775.1_7156_6_33	-	1542C
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15184	39.5	-	CKKJ01	61	2408	2168	3/21/15	3/11/17	Scaffold	SC	SAMEA1023868	GCA_001135665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/665/GCA_001135665.1_6631_7_12	-	23F
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10592	39.7	-	CLDC01	59	2341	2120	3/21/15	3/10/17	Scaffold	SC	SAMEA1026005	GCA_001135685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/685/GCA_001135685.1_6899_4_3	-	SMRU2019
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36709	65.6	-	COSI01	114	4301	4073	3/23/15	3/12/17	Scaffold	SC	SAMEA1403903	GCA_001383795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/795/GCA_001383795.1_7755_4_37	-	0773R
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.942	50.8	-	LVPQ01	60	5121	4829	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376830	GCA_001616555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/555/GCA_001616555.1_ASM161655v1	-	sheep21
Salmonella enterica subsp. enterica serovar Agbeni	1967642	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.67615	51.9	-	MZBQ01	66	4713	4482	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264974	GCA_002046745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/745/GCA_002046745.1_ASM204674v1	-	04-0473
Staphylococcus aureus M1100	1392091	PRJNA217175	217175	Terrabacteria group	Firmicutes	2.83114	32.8	-	JDDW01	33	2983	2816	2/3/14	3/2/17	Contig	Broad Institute	SAMN02334699	GCA_000535755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/755/GCA_000535755.1_Stap_aure_M1100_V1	-	M1100
Staphylococcus aureus M1561	1393702	PRJNA217726	217726	Terrabacteria group	Firmicutes	2.86187	32.8	-	JDDX01	40	3018	2857	2/3/14	3/2/17	Contig	Broad Institute	SAMN02339941	GCA_000535775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/775/GCA_000535775.1_Stap_aure_M1561_V1	-	M1561
Salmonella enterica subsp. enterica serovar Indiana	286783	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.76074	52	-	MZBR01	234	4938	4567	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265015	GCA_002046785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/785/GCA_002046785.1_ASM204678v1	-	04-0231
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.95493	50.8	-	LVPR01	51	5127	4837	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376831	GCA_001616575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/575/GCA_001616575.1_ASM161657v1	-	sheep22
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3628	65.6	-	COUO01	109	4287	4080	3/22/15	3/12/17	Scaffold	SC	SAMEA1403904	GCA_001383815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/815/GCA_001383815.1_7769_7_18	-	1268E
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.04807	39.6	-	CRSU01	76	2226	1996	3/23/15	3/11/17	Scaffold	SC	SAMEA1025211	GCA_001135705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/705/GCA_001135705.1_6805_3_21	-	SMRU1461
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.18628	39.6	-	CKIQ01	82	2470	2208	3/21/15	3/4/17	Scaffold	SC	SAMEA1023875	GCA_001135845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/845/GCA_001135845.1_6631_4_15	-	23F
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36666	65.6	-	COLV01	107	4287	4082	3/23/15	3/11/17	Scaffold	SC	SAMEA1403905	GCA_001383835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/835/GCA_001383835.1_7156_6_34	-	1949V
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.41947	50.5	-	LVPS01	85	5737	5355	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376832	GCA_001616585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/585/GCA_001616585.1_ASM161658v1	-	sheep23
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83322	52.2	-	MZBT01	66	4925	4652	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03359907	GCA_002046805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/805/GCA_002046805.1_ASM204680v1	-	BCW_6089
Staphylococcus aureus M1579	1393715	PRJNA217739	217739	Terrabacteria group	Firmicutes	2.86087	32.8	-	JDDY01	44	2993	2838	2/3/14	3/2/17	Contig	Broad Institute	SAMN02339954	GCA_000535795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/795/GCA_000535795.1_Stap_aure_M1579_V1	-	M1579
Staphylococcus aureus M0755	1393721	PRJNA217745	217745	Terrabacteria group	Firmicutes	2.81616	32.8	-	JDDZ01	25	2962	2804	2/3/14	3/2/17	Contig	Broad Institute	SAMN02339960	GCA_000535815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/815/GCA_000535815.1_Stap_aure_M0755_V1	-	M0755
Salmonella enterica subsp. enterica serovar Oslo	1005394	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.54618	52.4	-	MZBS01	43	4572	4356	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264945	GCA_002046815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/815/GCA_002046815.1_ASM204681v1	-	02-0012
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.26691	50.5	-	LVPU01	80	5434	5119	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376834	GCA_001616635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/635/GCA_001616635.1_ASM161663v1	-	sheep25
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39153	65.6	-	COVY01	99	4305	4107	3/23/15	3/12/17	Scaffold	SC	SAMEA1403907	GCA_001383855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/855/GCA_001383855.1_7769_8_55	-	1551M
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.15571	39.7	-	CMUD01	93	2348	2039	3/23/15	3/6/17	Scaffold	SC	SAMEA1022833	GCA_001135925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/925/GCA_001135925.1_5737_3_9	-	106_44
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.12988	39.5	-	CKRM01	70	2327	2096	3/21/15	3/4/17	Scaffold	SC	SAMEA1023901	GCA_001135945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/945/GCA_001135945.1_6680_8_11	-	SMRU203
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36723	65.6	-	COSF01	127	4298	4082	3/23/15	3/11/17	Scaffold	SC	SAMEA1403910	GCA_001383915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/915/GCA_001383915.1_7755_4_33	-	0757Z
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.36292	50.5	-	LVPW01	126	5735	5357	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376836	GCA_001616665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/665/GCA_001616665.1_ASM161666v1	-	sheep27
Salmonella enterica subsp. enterica serovar Worthington	1160769	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.77565	52.2	-	MZBW01	53	4851	4601	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265078	GCA_002046845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/845/GCA_002046845.1_ASM204684v1	-	97-0196
Staphylococcus aureus M0765	1393730	PRJNA217756	217756	Terrabacteria group	Firmicutes	2.83081	32.8	-	JDEA01	38	2989	2821	2/3/14	3/2/17	Contig	Broad Institute	SAMN02339969	GCA_000535835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/835/GCA_000535835.1_Stap_aure_M0765_V1	-	M0765
Staphylococcus aureus M1368	1397997	PRJNA218372	218372	Terrabacteria group	Firmicutes	2.88135	32.8	-	JDEB01	49	3044	2864	2/3/14	3/2/17	Contig	Broad Institute	SAMN02350552	GCA_000535855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/855/GCA_000535855.1_Stap_aure_M1368_V1	-	M1368
Salmonella enterica subsp. enterica serovar Chester	149386	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.65204	52	-	MZBV01	46	4702	4449	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264877	GCA_002046865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/865/GCA_002046865.1_ASM204686v1	-	98-0380
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.49855	50.3	-	LVPX01	177	6033	5518	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376837	GCA_001616695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/695/GCA_001616695.1_ASM161669v1	-	sheep28
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36948	65.6	-	COWC01	110	4297	4076	3/23/15	3/12/17	Scaffold	SC	SAMEA1403911	GCA_001383935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/935/GCA_001383935.1_7769_8_59	-	1588C
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	1.97167	39.7	-	CRBV01	49	2164	1959	3/22/15	3/4/17	Scaffold	SC	SAMEA1024844	GCA_001136025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/025/GCA_001136025.1_6731_1_3	-	SMRU987
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.10615	39.5	-	CMMY01	55	2328	2077	3/23/15	3/4/17	Scaffold	SC	SAMEA1029349	GCA_001136045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/045/GCA_001136045.1_7068_4_6	-	SMRU3126
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36699	65.6	-	COUM01	117	4296	4089	3/23/15	3/11/17	Scaffold	SC	SAMEA1403912	GCA_001383955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/955/GCA_001383955.1_7769_7_17	-	1256R
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.4634	50.5	-	LVPZ01	81	5785	5402	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376839	GCA_001616735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/735/GCA_001616735.1_ASM161673v1	-	sheep30
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.78518	51.9	-	MZBZ01	51	4828	4570	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03359900	GCA_002046875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/875/GCA_002046875.1_ASM204687v1	-	BCW_6082
Staphylococcus aureus M1379	1398004	PRJNA218379	218379	Terrabacteria group	Firmicutes	2.8589	32.9	-	JDEC01	15	2995	2826	2/3/14	3/2/17	Contig	Broad Institute	SAMN02350559	GCA_000535875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/875/GCA_000535875.1_Stap_aure_M1379_V1	-	M1379
Staphylococcus aureus M1384	1398008	PRJNA218383	218383	Terrabacteria group	Firmicutes	2.86292	32.8	-	JDED01	44	3021	2862	2/3/14	3/2/17	Contig	Broad Institute	SAMN02350563	GCA_000535895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/895/GCA_000535895.1_Stap_aure_M1384_V1	-	M1384
Salmonella enterica subsp. enterica serovar Worthington	1160769	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83834	52.2	-	MZCA01	1371	5508	4484	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265077	GCA_002046885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/885/GCA_002046885.1_ASM204688v1	-	2012K-1221
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.45221	50.4	-	LVQB01	177	5974	5522	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376841	GCA_001616775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/775/GCA_001616775.1_ASM161677v1	-	sheep32
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36729	65.6	-	COQW01	106	4292	4090	3/22/15	3/12/17	Scaffold	SC	SAMEA1403913	GCA_001383975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/975/GCA_001383975.1_7755_3_78	-	0525X
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.03553	39.7	-	CKDM01	75	2218	1961	3/21/15	3/9/17	Scaffold	SC	SAMEA1023926	GCA_001136105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/105/GCA_001136105.1_6630_1_12	-	3
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08077	39.6	-	CRFZ01	53	2295	2076	3/22/15	3/4/17	Scaffold	SC	SAMEA1025226	GCA_001136205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/205/GCA_001136205.1_6736_5_16	-	SMRU1240
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36874	65.6	-	COSR01	115	4303	4083	3/22/15	3/12/17	Scaffold	SC	SAMEA1403915	GCA_001383995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/383/995/GCA_001383995.1_7755_4_8	-	0668C
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.81924	50.6	-	LVQD01	61	4973	4673	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376843	GCA_001616815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/815/GCA_001616815.1_ASM161681v1	-	sheep34
Salmonella enterica subsp. enterica serovar Albany	211968	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.82808	52	-	MZBY01	1424	5503	4493	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264982	GCA_002046915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/915/GCA_002046915.1_ASM204691v1	-	95-0155
Staphylococcus aureus M1385	1398009	PRJNA218384	218384	Terrabacteria group	Firmicutes	2.85816	32.9	-	JDEE01	15	2999	2834	2/3/14	3/2/17	Contig	Broad Institute	SAMN02350564	GCA_000535915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/915/GCA_000535915.1_Stap_aure_M1385_V1	-	M1385
Staphylococcus aureus M1388	1398012	PRJNA218387	218387	Terrabacteria group	Firmicutes	2.87487	32.8	-	JDEF01	19	3010	2845	2/3/14	3/2/17	Contig	Broad Institute	SAMN02350567	GCA_000535935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/935/GCA_000535935.1_Stap_aure_M1388_V1	-	M1388
Salmonella enterica subsp. enterica serovar Grumpensis	260681	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.5958	52.2	-	MZCE01	195	4709	4366	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264898	GCA_002046945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/945/GCA_002046945.1_ASM204694v1	-	2009K1704
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.83686	50.6	-	LVQE01	101	5071	4723	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376844	GCA_001616825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/825/GCA_001616825.1_ASM161682v1	-	sheep35
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36582	65.6	-	COTJ01	119	4292	4086	3/23/15	3/12/17	Scaffold	SC	SAMEA1403916	GCA_001384015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/015/GCA_001384015.1_7755_5_75	-	0903H
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.20232	39.6	-	CPPV01	92	2447	2188	3/23/15	3/4/17	Scaffold	SC	SAMEA1408245	GCA_001136225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/225/GCA_001136225.1_7444_8_55	-	0109+28217
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.07746	39.5	-	CLFM01	65	2269	2046	3/21/15	3/11/17	Scaffold	SC	SAMEA1026016	GCA_001136425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/425/GCA_001136425.1_6899_7_9	-	SMRU2097
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36808	65.6	-	COSE01	117	4293	4076	3/23/15	3/12/17	Scaffold	SC	SAMEA1403917	GCA_001384035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/035/GCA_001384035.1_7755_4_34	-	0758A
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.85767	50.7	-	LVQF01	53	5044	4754	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376845	GCA_001616855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/855/GCA_001616855.1_ASM161685v1	-	sheep36
Salmonella enterica subsp. enterica serovar Chester	149386	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7406	52	-	MZCD01	64	4874	4576	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264876	GCA_002046965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/965/GCA_002046965.1_ASM204696v1	-	2010K-1260
Staphylococcus aureus M1404	1398024	PRJNA218399	218399	Terrabacteria group	Firmicutes	2.88997	32.9	-	JDEG01	66	3076	2882	2/3/14	3/2/17	Contig	Broad Institute	SAMN02350579	GCA_000535955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/955/GCA_000535955.1_Stap_aure_M1404_V1	-	M1404
Staphylococcus aureus M1418	1398036	PRJNA218412	218412	Terrabacteria group	Firmicutes	2.88461	32.9	-	JDEH01	13	3019	2865	2/3/14	3/2/17	Contig	Broad Institute	SAMN02350591	GCA_000535975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/975/GCA_000535975.1_Stap_aure_M1418_V1	-	M1418
Salmonella enterica subsp. enterica serovar Oslo	1005394	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.55257	52.4	-	MZCC01	320	4758	4331	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264943	GCA_002046975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/046/975/GCA_002046975.1_ASM204697v1	-	2010K-1591
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.70611	50.7	-	LVQG01	90	4925	4555	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376846	GCA_001616875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/875/GCA_001616875.1_ASM161687v1	-	sheep37
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35621	65.6	-	CORI01	88	4272	4087	3/23/15	3/12/17	Scaffold	SC	SAMEA1403918	GCA_001384055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/055/GCA_001384055.1_7755_4_10	-	0671F
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.99678	39.7	-	CKLR01	57	2193	1953	3/21/15	3/10/17	Scaffold	SC	SAMEA1888686	GCA_001136485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/485/GCA_001136485.1_6649_7_15	-	SMRU543
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.03907	39.6	-	CIMC01	72	2246	2017	3/21/15	3/11/17	Scaffold	SC	SAMEA1023957	GCA_001136565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/565/GCA_001136565.1_6631_4_10	-	16F
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36728	65.6	-	COLW01	108	4304	4088	3/23/15	3/12/17	Scaffold	SC	SAMEA1403919	GCA_001384075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/075/GCA_001384075.1_7156_6_31	-	1530P
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.71753	50.8	-	LVQJ01	76	4927	4542	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376849	GCA_001616935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/935/GCA_001616935.1_ASM161693v1	-	sheep40
Salmonella enterica subsp. enterica serovar Indiana	286783	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.82195	52	-	MZCF01	125	4958	4678	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265013	GCA_002047005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/005/GCA_002047005.1_ASM204700v1	-	2009K0767
Staphylococcus aureus M1468	1398075	PRJNA218451	218451	Terrabacteria group	Firmicutes	2.90054	32.9	-	JDEI01	24	3038	2871	2/3/14	3/2/17	Contig	Broad Institute	SAMN02350630	GCA_000535995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/535/995/GCA_000535995.1_Stap_aure_M1468_V1	-	M1468
Staphylococcus aureus M1473	1398080	PRJNA218456	218456	Terrabacteria group	Firmicutes	2.85715	32.9	-	JDEJ01	22	2992	2827	2/3/14	3/2/17	Contig	Broad Institute	SAMN02350635	GCA_000536015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/015/GCA_000536015.1_Stap_aure_M1473_V1	-	M1473
Salmonella enterica subsp. enterica serovar Oslo	1005394	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.55139	52.4	-	MZCG01	230	4684	4341	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264942	GCA_002047025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/025/GCA_002047025.1_ASM204702v1	-	2009K0417
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.82925	50.5	-	LVQK01	59	5040	4714	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376850	GCA_001616975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/975/GCA_001616975.1_ASM161697v1	-	sheep41
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36684	65.6	-	COUN01	108	4288	4078	3/23/15	3/12/17	Scaffold	SC	SAMEA1403920	GCA_001384095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/095/GCA_001384095.1_7769_7_16	-	1250K
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.23355	39.4	-	CMEO01	94	2455	2213	3/21/15	3/11/17	Scaffold	SC	SAMEA1028729	GCA_001136585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/585/GCA_001136585.1_7011_5_14	-	SMRU2798
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.0043	39.6	-	CQYK01	51	2186	1945	3/22/15	3/11/17	Scaffold	SC	SAMEA1025024	GCA_001136645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/645/GCA_001136645.1_6730_3_8	-	SMRU608
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.40275	65.6	-	COTK01	100	4320	4108	3/23/15	3/12/17	Scaffold	SC	SAMEA1403923	GCA_001384135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/135/GCA_001384135.1_7755_5_76	-	0904J
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.54232	50.3	-	LVQN01	177	6098	5584	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376853	GCA_001616985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/985/GCA_001616985.1_ASM161698v1	-	sheep44
Salmonella enterica subsp. enterica serovar Albany	211968	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.81086	52	-	MZCH01	51	4871	4647	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264981	GCA_002047035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/035/GCA_002047035.1_ASM204703v1	-	08-0005
Staphylococcus aureus M1339	1403837	PRJNA221383	221383	Terrabacteria group	Firmicutes	2.85014	32.8	-	JDEK01	61	3016	2860	2/3/14	3/2/17	Contig	Broad Institute	SAMN02363976	GCA_000536035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/035/GCA_000536035.1_Stap_aure_M1339_V1	-	M1339
Staphylococcus aureus M1343	1403839	PRJNA221385	221385	Terrabacteria group	Firmicutes	2.89483	32.8	-	JDEL01	28	3038	2870	2/3/14	3/2/17	Contig	Broad Institute	SAMN02363978	GCA_000536055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/055/GCA_000536055.1_Stap_aure_M1343_V1	-	M1343
Salmonella enterica subsp. enterica serovar Chester	149386	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.75211	52.2	-	MZCI01	54	4893	4634	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264875	GCA_002047045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/045/GCA_002047045.1_ASM204704v1	-	07-0282
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.09915	50.7	-	LVQM01	81	5303	4947	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376852	GCA_001617015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/015/GCA_001617015.1_ASM161701v1	-	sheep43
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38265	65.6	-	CIDY01	97	4310	4113	4/21/15	3/12/17	Scaffold	SC	SAMEA1403925	GCA_001384175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/175/GCA_001384175.1_7755_2_33	-	type strain: 0269
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.17674	39.6	-	CKVI01	74	2444	2177	3/21/15	3/11/17	Scaffold	SC	SAMEA1026219	GCA_001136665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/665/GCA_001136665.1_6823_3_7	-	SMRU1903
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.0247	40	-	CPKG01	148	2156	1975	3/22/15	3/11/17	Scaffold	SC	SAMEA682330	GCA_001136765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/765/GCA_001136765.1_5381_1_11	-	09B02850
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3682	65.6	-	COSS01	109	4295	4083	3/23/15	3/12/17	Scaffold	SC	SAMEA1403927	GCA_001384195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/195/GCA_001384195.1_7755_4_9	-	0669D
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.85921	50.7	-	LVQO01	41	5045	4762	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376854	GCA_001617025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/025/GCA_001617025.1_ASM161702v1	-	sheep45
Salmonella enterica subsp. enterica serovar London	149390	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.71055	52.1	-	MZCM01	489	4817	4494	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264923	GCA_002047085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/085/GCA_002047085.1_ASM204708v1	-	79-1783
Staphylococcus aureus M1357	1403853	PRJNA221399	221399	Terrabacteria group	Firmicutes	2.85491	32.9	-	JDEM01	59	2989	2803	2/3/14	3/2/17	Contig	Broad Institute	SAMN02363992	GCA_000536075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/075/GCA_000536075.1_Stap_aure_M1357_V1	-	M1357
Staphylococcus aureus M1358	1403854	PRJNA221400	221400	Terrabacteria group	Firmicutes	2.89529	32.9	-	JDEN01	27	3051	2878	2/3/14	3/2/17	Contig	Broad Institute	SAMN02363993	GCA_000536095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/095/GCA_000536095.1_Stap_aure_M1358_V1	-	M1358
Salmonella enterica subsp. enterica serovar Havana	179997	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.65257	52.2	-	MZCO01	214	4792	4463	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264905	GCA_002047095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/095/GCA_002047095.1_ASM204709v1	-	87-0094
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.80367	50.8	-	LVQP01	47	4925	4665	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376855	GCA_001617055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/055/GCA_001617055.1_ASM161705v1	-	sheep46
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38089	65.6	-	COQU01	95	4288	4105	3/22/15	3/12/17	Scaffold	SC	SAMEA1403928	GCA_001384215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/215/GCA_001384215.1_7755_3_77	-	0520R
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.05426	39.6	-	CRFI01	64	2276	2044	3/23/15	3/11/17	Scaffold	SC	SAMEA1025521	GCA_001136825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/825/GCA_001136825.1_6736_4_14	-	SMRU1214
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14673	39.6	-	CKRZ01	79	2400	2150	3/21/15	3/11/17	Scaffold	SC	SAMEA1023811	GCA_001136845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/845/GCA_001136845.1_6680_8_5	-	SMRU197
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38692	65.6	-	COQB01	91	4307	4116	3/22/15	3/11/17	Scaffold	SC	SAMEA1403930	GCA_001384255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/255/GCA_001384255.1_7755_3_53	-	0355M
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.78509	50.7	-	LVQQ01	54	4967	4681	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376856	GCA_001617075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/075/GCA_001617075.1_ASM161707v1	-	sheep47
Salmonella enterica subsp. enterica serovar Albany	211968	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.77026	52.1	-	MZCK01	123	4851	4580	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264980	GCA_002047105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/105/GCA_002047105.1_ASM204710v1	-	06-0796
Staphylococcus aureus M1362	1403857	PRJNA221403	221403	Terrabacteria group	Firmicutes	2.8556	32.8	-	JDEO01	54	3056	2871	2/3/14	3/2/17	Contig	Broad Institute	SAMN02363996	GCA_000536115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/115/GCA_000536115.1_Stap_aure_M1362_V1	-	M1362
Staphylococcus aureus M1488	1403872	PRJNA221418	221418	Terrabacteria group	Firmicutes	2.89982	32.9	-	JDEP01	58	3032	2869	2/3/14	3/2/17	Contig	Broad Institute	SAMN02364011	GCA_000536135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/135/GCA_000536135.1_Stap_aure_M1488_V1	-	M1488
Salmonella enterica subsp. enterica serovar Cerro	340188	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.54849	52.3	-	MZCQ01	71	4613	4358	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264996	GCA_002047115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/115/GCA_002047115.1_ASM204711v1	-	77-3451
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.22657	50.6	-	LVQR01	105	5535	5168	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376857	GCA_001617095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/095/GCA_001617095.1_ASM161709v1	-	sheep48
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36514	65.6	-	CORX01	130	4300	4082	3/23/15	3/12/17	Scaffold	SC	SAMEA1403931	GCA_001384275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/275/GCA_001384275.1_7755_4_25	-	0732X
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.14862	39.6	-	CLFS01	54	2364	2138	3/21/15	3/11/17	Scaffold	SC	SAMEA1025812	GCA_001136865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/865/GCA_001136865.1_6925_3_23	-	SMRU2135
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10454	39.7	-	CKZA01	65	2314	2092	3/21/15	3/10/17	Scaffold	SC	SAMEA1026256	GCA_001136905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/905/GCA_001136905.1_6840_1_16	-	SMRU1768
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36391	65.6	-	COYW01	113	4290	4086	3/23/15	3/12/17	Scaffold	SC	SAMEA1403932	GCA_001384295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/295/GCA_001384295.1_7841_7_67	-	2007H
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.79193	50.7	-	LVQS01	54	4976	4690	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376858	GCA_001617115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/115/GCA_001617115.1_ASM161711v1	-	sheep49
Salmonella enterica subsp. enterica serovar Johannesburg	913076	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.56712	52.2	-	MZCR01	42	4634	4392	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264915	GCA_002047165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/165/GCA_002047165.1_ASM204716v1	-	78-0685
Staphylococcus aureus M1494	1403878	PRJNA221424	221424	Terrabacteria group	Firmicutes	2.84297	32.8	-	JDEQ01	45	2985	2811	2/3/14	3/2/17	Contig	Broad Institute	SAMN02364017	GCA_000536155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/155/GCA_000536155.1_Stap_aure_M1494_V1	-	M1494
Staphylococcus aureus M1503	1403886	PRJNA221432	221432	Terrabacteria group	Firmicutes	2.95951	32.9	-	JDER01	138	3140	2909	2/3/14	3/2/17	Contig	Broad Institute	SAMN02364025	GCA_000536175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/175/GCA_000536175.1_Stap_aure_M1503_V1	-	M1503
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.79921	52.2	-	MZCS01	75	4905	4628	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03359880	GCA_002047185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/185/GCA_002047185.1_ASM204718v1	-	BCW_6062
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.51896	50.3	-	LVQT01	172	6054	5545	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376859	GCA_001617135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/135/GCA_001617135.1_ASM161713v1	-	sheep50
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.40268	65.6	-	COQC01	107	4313	4107	3/23/15	3/12/17	Scaffold	SC	SAMEA1403933	GCA_001384315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/315/GCA_001384315.1_7755_3_52	-	0346C
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12412	39.6	-	CMCQ01	60	2353	2116	3/21/15	3/10/17	Scaffold	SC	SAMEA1029266	GCA_001136925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/925/GCA_001136925.1_7004_8_84	-	SMRU2916
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.03043	39.7	-	CPSN01	73	2195	2023	3/23/15	3/10/17	Scaffold	SC	SAMEA682611	GCA_001136945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/945/GCA_001136945.1_5366_7_11	-	09B00218
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36928	65.6	-	CONQ01	109	4292	4085	3/23/15	3/12/17	Scaffold	SC	SAMEA1403935	GCA_001384335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/335/GCA_001384335.1_7156_7_83	-	0071D
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.80519	50.8	-	LVQU01	49	4932	4671	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376860	GCA_001617145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/145/GCA_001617145.1_ASM161714v1	-	sheep51
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.61573	52.2	-	MZCT01	53	4717	4458	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03359879	GCA_002047195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/195/GCA_002047195.1_ASM204719v1	-	BCW_6061
Staphylococcus aureus M1509	1403892	PRJNA221438	221438	Terrabacteria group	Firmicutes	2.82485	32.8	-	JDES01	45	2987	2824	2/3/14	3/2/17	Contig	Broad Institute	SAMN02364031	GCA_000536195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/195/GCA_000536195.1_Stap_aure_M1509_V1	-	M1509
Staphylococcus aureus M1522	1403901	PRJNA221447	221447	Terrabacteria group	Firmicutes	2.86211	32.9	-	JDET01	75	3024	2846	2/3/14	3/2/17	Contig	Broad Institute	SAMN02364040	GCA_000536215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/215/GCA_000536215.1_Stap_aure_M1522_V1	-	M1522
Salmonella enterica subsp. enterica serovar Telelkebir	1967657	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.03206	52.1	-	MZCU01	132	5194	4838	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265067	GCA_002047205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/205/GCA_002047205.1_ASM204720v1	-	76-0298
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.74608	50.6	-	LVQV01	37	4878	4637	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376861	GCA_001617175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/175/GCA_001617175.1_ASM161717v1	-	sheep52
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3611	65.6	-	CORS01	91	4281	4092	3/23/15	3/11/17	Scaffold	SC	SAMEA1403937	GCA_001384355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/355/GCA_001384355.1_7755_4_24	-	0730V
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1779	39.4	-	CKUZ01	68	2410	2165	3/21/15	3/10/17	Scaffold	SC	SAMEA1026168	GCA_001136965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/965/GCA_001136965.1_6823_3_20	-	SMRU1916
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.13549	39.7	-	CKFY01	150	2278	2024	3/21/15	3/14/17	Scaffold	SC	SAMEA1024083	GCA_001136985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/985/GCA_001136985.1_6630_4_20	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36573	65.6	-	COLL01	111	4291	4078	3/23/15	3/12/17	Scaffold	SC	SAMEA1403938	GCA_001384375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/375/GCA_001384375.1_7156_6_2	-	1052V
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.52514	50.4	-	LVQX01	176	6060	5601	4/8/16	2/25/17	Contig	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376863	GCA_001617215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/215/GCA_001617215.1_ASM161721v1	-	sheep54
Salmonella enterica subsp. enterica serovar Bredeney	134047	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.63486	52.2	-	MZCW01	35	4724	4491	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264874	GCA_002047245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/245/GCA_002047245.1_ASM204724v1	-	58-5391
Staphylococcus aureus M1527	1403905	PRJNA221451	221451	Terrabacteria group	Firmicutes	2.85009	32.9	-	JDEU01	32	2986	2811	2/3/14	3/2/17	Contig	Broad Institute	SAMN02364044	GCA_000536235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/235/GCA_000536235.1_Stap_aure_M1527_V1	-	M1527
Staphylococcus aureus M1536	1403912	PRJNA221458	221458	Terrabacteria group	Firmicutes	2.839	32.9	-	JDEV01	18	2963	2796	2/3/14	3/2/17	Contig	Broad Institute	SAMN02364051	GCA_000536255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/255/GCA_000536255.1_Stap_aure_M1536_V1	-	M1536
Salmonella enterica subsp. enterica serovar Bredeney	134047	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.67465	52.1	-	MZCX01	53	4760	4529	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264873	GCA_002047265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/265/GCA_002047265.1_ASM204726v1	-	51-2633
Escherichia coli	562	PRJNA291434	291434	Proteobacteria	Gammaproteobacteria	5.27288	50.2	-	LHAI01	414	5744	5264	4/13/16	2/25/17	Contig	Agriculture and Agri-Food Canada	SAMN03944326	GCA_001619065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/065/GCA_001619065.1_ASM161906v1	27018858	274Jul8F
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.368	65.6	-	COVQ01	113	4299	4091	3/23/15	3/11/17	Scaffold	SC	SAMEA1403939	GCA_001384395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/395/GCA_001384395.1_7769_7_8	-	1186Q
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.14176	39.7	-	CMVB01	121	2312	2018	3/23/15	3/10/17	Scaffold	SC	SAMEA1991759	GCA_001137025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/025/GCA_001137025.1_5756_5_10	-	274
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07436	39.7	-	CKBL01	104	2298	2064	3/21/15	3/10/17	Scaffold	SC	SAMEA974636	GCA_001137045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/045/GCA_001137045.1_6259_8_1	-	13
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38501	65.6	-	COLT01	96	4301	4105	3/23/15	3/12/17	Scaffold	SC	SAMEA1403940	GCA_001384415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/415/GCA_001384415.1_7156_6_30	-	1524H
Escherichia coli	562	PRJNA291434	291434	Proteobacteria	Gammaproteobacteria	5.26802	50.2	-	LHAH01	336	5700	5252	4/13/16	2/25/17	Contig	Agriculture and Agri-Food Canada	SAMN03944325	GCA_001619075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/075/GCA_001619075.1_ASM161907v1	27018858	219Jul8F
Salmonella enterica subsp. enterica serovar Telelkebir	1967657	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.60737	52.1	-	MZDC01	64	4642	4378	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265065	GCA_002047275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/275/GCA_002047275.1_ASM204727v1	-	02-0134
Staphylococcus aureus M1539	1403914	PRJNA221460	221460	Terrabacteria group	Firmicutes	2.83379	32.8	-	JDEW01	90	3006	2813	2/3/14	3/2/17	Contig	Broad Institute	SAMN02364053	GCA_000536275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/275/GCA_000536275.1_Stap_aure_M1539_V1	-	M1539
Staphylococcus aureus M1543	1403917	PRJNA221463	221463	Terrabacteria group	Firmicutes	2.84048	32.9	-	JDEX01	48	2993	2808	2/3/14	3/2/17	Contig	Broad Institute	SAMN02364056	GCA_000536295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/295/GCA_000536295.1_Stap_aure_M1543_V1	-	M1543
Salmonella enterica subsp. enterica serovar Bredeney	134047	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.58821	52.1	-	MZDE01	45	4654	4427	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264871	GCA_002047285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/285/GCA_002047285.1_ASM204728v1	-	00-0315
Escherichia coli	562	PRJNA291434	291434	Proteobacteria	Gammaproteobacteria	5.25378	50.1	-	LHAN01	381	5712	5233	4/13/16	2/25/17	Contig	Agriculture and Agri-Food Canada	SAMN03944361	GCA_001619085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/085/GCA_001619085.1_ASM161908v1	27018858	K3_66F
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3698	65.6	-	COVR01	101	4284	4087	3/23/15	3/12/17	Scaffold	SC	SAMEA1403941	GCA_001384435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/435/GCA_001384435.1_7769_7_7	-	1182L
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09516	39.4	-	CMHG01	52	2340	2087	3/23/15	3/11/17	Scaffold	SC	SAMEA1029217	GCA_001137105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/105/GCA_001137105.1_7038_5_18	-	SMRU2970
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.07196	39.7	-	CKUN01	66	2282	2078	3/21/15	3/11/17	Scaffold	SC	SAMEA1026075	GCA_001137125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/125/GCA_001137125.1_6823_3_16	-	SMRU1912
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3652	65.6	-	CONN01	117	4288	4088	3/23/15	3/12/17	Scaffold	SC	SAMEA1403943	GCA_001384455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/455/GCA_001384455.1_7156_7_82	-	0070C
Escherichia coli	562	PRJNA291434	291434	Proteobacteria	Gammaproteobacteria	5.31626	50.2	-	LHAP01	486	5849	5320	4/13/16	2/25/17	Contig	Agriculture and Agri-Food Canada	SAMN03944363	GCA_001619095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/095/GCA_001619095.1_ASM161909v1	27018858	K9_45F
Salmonella enterica subsp. enterica serovar Cerro	340188	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.64175	52.2	-	MZDF01	83	4734	4472	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264995	GCA_002047325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/325/GCA_002047325.1_ASM204732v1	-	99-0449
Staphylococcus aureus M1547	1403920	PRJNA221466	221466	Terrabacteria group	Firmicutes	2.83748	32.9	-	JDEY01	50	2991	2825	2/3/14	3/2/17	Contig	Broad Institute	SAMN02364059	GCA_000536315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/315/GCA_000536315.1_Stap_aure_M1547_V1	-	M1547
Staphylococcus aureus M1548	1403921	PRJNA221467	221467	Terrabacteria group	Firmicutes	2.83004	32.8	-	JDEZ01	49	2992	2813	2/3/14	3/2/17	Contig	Broad Institute	SAMN02364060	GCA_000536335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/335/GCA_000536335.1_Stap_aure_M1548_V1	-	M1548
Salmonella enterica subsp. enterica serovar Havana	179997	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80581	52.2	-	MZDG01	65	4854	4601	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264903	GCA_002047345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/345/GCA_002047345.1_ASM204734v1	-	97-0232
Escherichia coli	562	PRJNA291434	291434	Proteobacteria	Gammaproteobacteria	5.27079	50.2	-	LHAJ01	364	5731	5261	4/13/16	2/25/17	Contig	Agriculture and Agri-Food Canada	SAMN03944327	GCA_001619135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/135/GCA_001619135.1_ASM161913v1	27018858	287Jul8F
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39322	65.6	-	COWB01	119	4308	4103	3/23/15	3/12/17	Scaffold	SC	SAMEA1403945	GCA_001384475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/475/GCA_001384475.1_7769_8_60	-	1589D
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.03921	39.5	-	CRHT01	69	2227	2009	3/23/15	3/11/17	Scaffold	SC	SAMEA1025340	GCA_001137165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/165/GCA_001137165.1_6736_8_13	-	SMRU1309
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.17178	39.4	-	CLLM01	75	2459	2182	3/21/15	3/10/17	Scaffold	SC	SAMEA1028655	GCA_001137285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/285/GCA_001137285.1_6938_5_6	-	SMRU2646
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35942	65.6	-	CONR01	91	4272	4079	3/22/15	3/12/17	Scaffold	SC	SAMEA1403949	GCA_001384495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/495/GCA_001384495.1_7156_7_85	-	1324Q
Escherichia coli	562	PRJNA291434	291434	Proteobacteria	Gammaproteobacteria	5.28119	50.2	-	LHAK01	392	5742	5262	4/13/16	2/25/17	Contig	Agriculture and Agri-Food Canada	SAMN03944340	GCA_001619145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/145/GCA_001619145.1_ASM161914v1	27018858	299Jul8F
Salmonella enterica subsp. enterica serovar London	149390	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.97378	51.8	-	MZDI01	77	5079	4824	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264921	GCA_002047355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/355/GCA_002047355.1_ASM204735v1	-	95-0457
Staphylococcus aureus M1549	1403922	PRJNA221468	221468	Terrabacteria group	Firmicutes	2.89736	32.8	-	JDFA01	52	3037	2884	2/3/14	3/2/17	Contig	Broad Institute	SAMN02364061	GCA_000536355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/355/GCA_000536355.1_Stap_aure_M1549_V1	-	M1549
Staphylococcus aureus M1554	1403927	PRJNA221473	221473	Terrabacteria group	Firmicutes	2.86321	32.9	-	JDFB01	13	3004	2839	2/3/14	3/2/17	Contig	Broad Institute	SAMN02364066	GCA_000536375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/375/GCA_000536375.1_Stap_aure_M1554_V1	-	M1554
Salmonella enterica subsp. enterica serovar Telelkebir	1967657	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.56881	52.2	-	MZDH01	63	4581	4324	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265064	GCA_002047365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/365/GCA_002047365.1_ASM204736v1	-	96-0373
Escherichia coli	562	PRJNA291434	291434	Proteobacteria	Gammaproteobacteria	5.38857	50.2	-	LHAL01	501	5944	5391	4/13/16	2/25/17	Contig	Agriculture and Agri-Food Canada	SAMN03944341	GCA_001619155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/155/GCA_001619155.1_ASM161915v1	27018858	342Jul26F
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36594	65.6	-	CORU01	117	4290	4079	3/23/15	3/12/17	Scaffold	SC	SAMEA1403951	GCA_001384535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/535/GCA_001384535.1_7755_4_22	-	0725P
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.05127	39.6	-	CMCH01	41	2245	2010	3/21/15	3/11/17	Scaffold	SC	SAMEA1029426	GCA_001137325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/325/GCA_001137325.1_7004_8_74	-	SMRU2906
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.05345	39.6	-	CKTE01	25	2244	2003	3/21/15	3/4/17	Scaffold	SC	SAMEA1025431	GCA_001137385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/385/GCA_001137385.1_6807_3_3	-	SMRU1611
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37928	65.6	-	COWD01	116	4275	4101	3/23/15	3/12/17	Scaffold	SC	SAMEA1403952	GCA_001384555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/555/GCA_001384555.1_7769_8_61	-	1638G
Escherichia coli	562	PRJNA291434	291434	Proteobacteria	Gammaproteobacteria	5.27693	50.2	-	LHAM01	355	5726	5260	4/13/16	2/25/17	Contig	Agriculture and Agri-Food Canada	SAMN03944356	GCA_001619195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/195/GCA_001619195.1_ASM161919v1	27018858	H7_221F
Salmonella enterica subsp. enterica serovar Cerro	340188	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.67687	52.2	-	MZDL01	74	4778	4501	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264994	GCA_002047405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/405/GCA_002047405.1_ASM204740v1	-	2010K-1259
Staphylococcus aureus M1555	1403928	PRJNA221474	221474	Terrabacteria group	Firmicutes	2.91013	32.9	-	JDFC01	67	3053	2888	2/3/14	3/2/17	Contig	Broad Institute	SAMN02364067	GCA_000536395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/395/GCA_000536395.1_Stap_aure_M1555_V1	-	M1555
Staphylococcus aureus M1558	1403930	PRJNA221476	221476	Terrabacteria group	Firmicutes	2.88879	32.9	-	JDFD01	56	3035	2886	2/3/14	3/2/17	Contig	Broad Institute	SAMN02364069	GCA_000536415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/415/GCA_000536415.1_Stap_aure_M1558_V1	-	M1558
"Salmonella enterica subsp. houtenae serovar 44:z4,z23:-"	1050193	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.59727	51.7	-	MZDN01	97	4624	4272	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265070	GCA_002047425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/425/GCA_002047425.1_ASM204742v1	-	94-0198
Escherichia coli	562	PRJNA291434	291434	Proteobacteria	Gammaproteobacteria	5.28881	50.2	-	LHAO01	423	5797	5307	4/13/16	2/25/17	Contig	Agriculture and Agri-Food Canada	SAMN03944362	GCA_001619205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/205/GCA_001619205.1_ASM161920v1	27018858	K9_16F
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3651	65.6	-	COYV01	121	4302	4085	3/22/15	3/11/17	Scaffold	SC	SAMEA1403953	GCA_001384575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/575/GCA_001384575.1_7841_7_65	-	2004E
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08381	39.7	-	CLAJ01	64	2317	2099	3/21/15	3/4/17	Scaffold	SC	SAMEA1025731	GCA_001137485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/485/GCA_001137485.1_6840_3_7	-	SMRU1807
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	1.99282	39.7	-	CRDD01	56	2185	1964	3/22/15	3/4/17	Scaffold	SC	SAMEA1024804	GCA_001137505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/505/GCA_001137505.1_6731_3_9	-	SMRU1041
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36462	65.6	-	COQS01	118	4295	4087	3/23/15	3/12/17	Scaffold	SC	SAMEA1403954	GCA_001384595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/595/GCA_001384595.1_7755_3_74	-	0506B
Escherichia coli	562	PRJNA291434	291434	Proteobacteria	Gammaproteobacteria	5.31122	50.3	-	LHAQ01	407	5802	5299	4/13/16	2/25/17	Contig	Agriculture and Agri-Food Canada	SAMN03944364	GCA_001619225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/619/225/GCA_001619225.1_ASM161922v1	27018858	K9107F
Salmonella enterica subsp. enterica serovar Telelkebir	1967657	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66	52.3	-	MZDO01	68	4700	4433	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264956	GCA_002047435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/435/GCA_002047435.1_ASM204743v1	-	07-0487
Staphylococcus aureus M0805	1388591	PRJNA216764	216764	Terrabacteria group	Firmicutes	2.88056	32.8	-	JDFE01	46	3039	2868	2/3/14	3/2/17	Contig	Broad Institute	SAMN02325715	GCA_000536435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/435/GCA_000536435.1_Stap_aure_M0805_V1	-	M0805
Staphylococcus aureus KINW6046	1409783	PRJNA224085	224085	Terrabacteria group	Firmicutes	2.89892	32.9	-	JBEM01	21	3061	2887	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381842	GCA_000536455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/455/GCA_000536455.1_Stap_aure_KINW6046_V1	-	KINW6046
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.82934	52.1	-	MZDP01	360	5143	4705	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265060	GCA_002047445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/445/GCA_002047445.1_ASM204744v1	-	06-0785
Escherichia coli APEC O2	1401689	PRJNA312653	312653	Proteobacteria	Gammaproteobacteria	4.90882	50.7	-	LSZR01	260	5080	4730	4/14/16	2/25/17	Contig	Copenhagen University	SAMN04503534	GCA_001620375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/375/GCA_001620375.1_ASM162037v1	-	APEC O2
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36051	65.6	-	COLS01	90	4266	4090	3/23/15	3/11/17	Scaffold	SC	SAMEA1403955	GCA_001384615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/615/GCA_001384615.1_7156_6_27	-	1079Z
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.14025	39.5	-	CMJN01	57	2380	2149	3/23/15	3/4/17	Scaffold	SC	SAMEA1026145	GCA_001137565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/565/GCA_001137565.1_7038_8_29	-	SMRU2237
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.18638	39.5	-	CLMR01	51	2439	2192	3/21/15	3/6/17	Scaffold	SC	SAMEA1028925	GCA_001137585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/585/GCA_001137585.1_6938_7_20	-	SMRU2708
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36624	65.6	-	CONP01	112	4289	4079	3/22/15	3/12/17	Scaffold	SC	SAMEA1403956	GCA_001384635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/635/GCA_001384635.1_7156_7_84	-	1323P
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.24971	50.8	-	LVRF01	359	5759	5175	4/18/16	2/25/17	Contig	JCVI	SAMN04393245	GCA_001620905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/905/GCA_001620905.1_ASM162090v1	-	GN04488
Salmonella enterica subsp. enterica serovar Hvittingfoss	486994	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69578	52.3	-	MZDT01	58	4757	4496	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265085	GCA_002047475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/475/GCA_002047475.1_ASM204747v1	-	88-0051
Staphylococcus aureus GGMC6057	1409779	PRJNA224081	224081	Terrabacteria group	Firmicutes	2.89635	32.7	-	JBEQ01	9	3048	2888	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381838	GCA_000536475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/475/GCA_000536475.1_Stap_aure_GGMC6057_V1	-	GGMC6057
Staphylococcus aureus SCLE6100	1409776	PRJNA224078	224078	Terrabacteria group	Firmicutes	2.90142	32.9	-	JBET01	25	3057	2887	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381835	GCA_000536495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/495/GCA_000536495.1_Stap_aure_SCLE6100_V1	-	SCLE6100
Salmonella enterica subsp. enterica serovar Uganda	487004	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66884	52.2	-	MZDW01	147	4686	4447	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264960	GCA_002047505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/505/GCA_002047505.1_ASM204750v1	-	65-4815
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.24793	50.6	-	LVRE01	319	5642	5089	4/18/16	2/25/17	Contig	JCVI	SAMN04393244	GCA_001620915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/915/GCA_001620915.1_ASM162091v1	-	GN04481
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.40271	65.6	-	COYT01	102	4305	4103	3/22/15	3/12/17	Scaffold	SC	SAMEA1403958	GCA_001384655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/655/GCA_001384655.1_7841_7_64	-	2001B
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.14366	39.5	-	CPLX01	76	2358	2110	3/23/15	3/4/17	Scaffold	SC	SAMEA1020430	GCA_001137665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/665/GCA_001137665.1_6187_6_19	-	LMG2062
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.07956	39.6	-	CMNH01	42	2299	2059	3/23/15	3/4/17	Scaffold	SC	SAMEA1029223	GCA_001137685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/685/GCA_001137685.1_7092_6_21	-	SMRU3117
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3714	65.6	-	COTP01	91	4285	4087	3/23/15	3/12/17	Scaffold	SC	SAMEA1403959	GCA_001384675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/675/GCA_001384675.1_7755_5_78	-	0912S
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.10539	50.7	-	LVRC01	370	5583	4953	4/18/16	2/25/17	Contig	JCVI	SAMN04393241	GCA_001620925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/925/GCA_001620925.1_ASM162092v1	-	GN04428
Salmonella enterica subsp. enterica serovar Inverness	913074	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.96471	52.1	-	MZDX01	157	5093	4811	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264912	GCA_002047515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/515/GCA_002047515.1_ASM204751v1	-	52-2211
Staphylococcus aureus PLAC6058	1409775	PRJNA224077	224077	Terrabacteria group	Firmicutes	2.89483	32.7	-	JBEU01	11	3045	2888	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381834	GCA_000536515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/515/GCA_000536515.1_Stap_aure_PLAC6058_V1	-	PLAC6058
Staphylococcus aureus WAMC6081	1409773	PRJNA224075	224075	Terrabacteria group	Firmicutes	2.93188	32.8	-	JBEW01	14	3114	2946	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381832	GCA_000536535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/535/GCA_000536535.1_Stap_aure_WAMC6081_V1	-	WAMC6081
Salmonella enterica subsp. enterica serovar Kiambu	682797	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.93578	51.9	-	MZDZ01	1145	4833	4538	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265035	GCA_002047545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/545/GCA_002047545.1_ASM204754v1	-	84-0491
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.04937	50.8	-	LVRD01	311	5436	4891	4/18/16	2/25/17	Contig	JCVI	SAMN04393243	GCA_001620935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/935/GCA_001620935.1_ASM162093v1	-	GN04472
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36067	65.6	-	CORV01	105	4298	4087	3/23/15	3/12/17	Scaffold	SC	SAMEA1403961	GCA_001384715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/715/GCA_001384715.1_7755_4_21	-	0721K
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.14583	39.7	-	CMWT01	97	2310	1989	3/23/15	3/6/17	Scaffold	SC	SAMEA1022954	GCA_001137725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/725/GCA_001137725.1_6406_5_2	-	405
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10465	39.4	-	CLNP01	66	2321	2084	3/21/15	3/4/17	Scaffold	SC	SAMEA1028725	GCA_001137765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/765/GCA_001137765.1_6938_8_4	-	SMRU2716
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.4	65.6	-	COPA01	102	4322	4111	3/23/15	3/12/17	Scaffold	SC	SAMEA1403962	GCA_001384735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/735/GCA_001384735.1_7755_2_26	-	0236H
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	4.99957	50.5	-	LVRG01	242	5258	4800	4/18/16	2/25/17	Contig	JCVI	SAMN04393246	GCA_001620985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/985/GCA_001620985.1_ASM162098v1	-	GN04499
Salmonella enterica subsp. enterica serovar Kiambu	682797	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.5094	52.2	-	MZDY01	150	4532	4300	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265036	GCA_002047555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/555/GCA_002047555.1_ASM204755v1	-	89-0386
Staphylococcus aureus UCIM6146	1409741	PRJNA224063	224063	Terrabacteria group	Firmicutes	2.96544	32.8	-	JBEZ01	14	3151	2986	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381802	GCA_000536555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/555/GCA_000536555.1_Stap_aure_UCIM6146_V1	-	UCIM6146
Staphylococcus aureus KINW6062	1409736	PRJNA224058	224058	Terrabacteria group	Firmicutes	2.8954	32.7	-	JBFE01	12	3051	2883	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381797	GCA_000536575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/575/GCA_000536575.1_Stap_aure_KINW6062_V1	-	KINW6062
"Salmonella enterica subsp. enterica serovar 4,12:b:-"	1967638	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80886	51.9	-	MZEA01	32	4810	4504	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265007	GCA_002047565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/565/GCA_002047565.1_ASM204756v1	-	68-3959
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.11368	50.7	-	LVRH01	129	5299	4910	4/18/16	2/25/17	Contig	JCVI	SAMN04393247	GCA_001620995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/995/GCA_001620995.1_ASM162099v1	-	GN04540
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36768	65.6	-	COOF01	87	4285	4100	3/23/15	3/12/17	Scaffold	SC	SAMEA1403965	GCA_001384755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/755/GCA_001384755.1_7314_8_70	-	0600D
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.0749	39.5	-	CKUJ01	49	2253	2040	3/21/15	3/4/17	Scaffold	SC	SAMEA1025727	GCA_001137785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/785/GCA_001137785.1_6823_2_6	-	SMRU1878
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10006	39.5	-	CLTJ01	64	2343	2107	3/21/15	3/4/17	Scaffold	SC	SAMEA1029108	GCA_001137845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/845/GCA_001137845.1_6972_5_17	-	SMRU2633
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36886	65.6	-	COLR01	88	4281	4100	3/23/15	3/12/17	Scaffold	SC	SAMEA1403966	GCA_001384775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/775/GCA_001384775.1_7156_6_26	-	1076W
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.23441	50.4	-	LVRI01	301	5626	5052	4/18/16	2/25/17	Contig	JCVI	SAMN04393248	GCA_001621005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/005/GCA_001621005.1_ASM162100v1	-	GN04542
Salmonella enterica subsp. enterica serovar Uganda	487004	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.78407	52.1	-	MZEB01	62	4884	4638	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264959	GCA_002047575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/575/GCA_002047575.1_ASM204757v1	-	2013K-0047
Staphylococcus aureus KINW6061	1409735	PRJNA224057	224057	Terrabacteria group	Firmicutes	2.90394	32.7	-	JBFF01	16	3060	2893	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381796	GCA_000536595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/595/GCA_000536595.1_Stap_aure_KINW6061_V1	-	KINW6061
Staphylococcus aureus WMCA6123	1409728	PRJNA224050	224050	Terrabacteria group	Firmicutes	2.91591	32.7	-	JBFM01	17	3073	2909	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381789	GCA_000536615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/615/GCA_000536615.1_Stap_aure_WMCA6123_V1	-	WMCA6123
Salmonella enterica subsp. enterica serovar Hvittingfoss	486994	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.67367	52.2	-	MZEC01	108	4768	4517	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265006	GCA_002047625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/625/GCA_002047625.1_ASM204762v1	-	2011K-1721
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.166	50.8	-	LVRJ01	322	5634	5057	4/18/16	2/25/17	Contig	JCVI	SAMN04393250	GCA_001621035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/035/GCA_001621035.1_ASM162103v1	-	GN04563
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36301	65.6	-	COOY01	106	4287	4088	3/23/15	3/12/17	Scaffold	SC	SAMEA1403970	GCA_001384815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/815/GCA_001384815.1_7755_2_2	-	0048D
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.16101	39.5	-	CLEO01	64	2399	2181	3/21/15	3/4/17	Scaffold	SC	SAMEA1026258	GCA_001137905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/905/GCA_001137905.1_6899_6_15	-	SMRU2079
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09644	39.4	-	CKLK01	140	2345	2087	3/21/15	3/14/17	Scaffold	SC	SAMEA1024021	GCA_001137925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/925/GCA_001137925.1_6641_6_21	-	10B
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35979	65.6	-	COWH01	111	4287	4072	3/23/15	3/12/17	Scaffold	SC	SAMEA1403972	GCA_001384835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/835/GCA_001384835.1_7769_8_64	-	1654Z
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.03819	50.7	-	LVRL01	265	5363	4845	4/18/16	2/25/17	Contig	JCVI	SAMN04393252	GCA_001621065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/065/GCA_001621065.1_ASM162106v1	-	GN04612
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.63905	52.1	-	MZED01	58	4722	4469	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03359842	GCA_002047635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/635/GCA_002047635.1_ASM204763v1	-	BCW_6021
Staphylococcus aureus FVRH6138	1409725	PRJNA224047	224047	Terrabacteria group	Firmicutes	2.87463	32.8	-	JBFO01	6	3027	2873	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381786	GCA_000536635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/635/GCA_000536635.1_Stap_aure_FVRH6138_V1	-	FVRH6138
Staphylococcus aureus WMCA6100	1409721	PRJNA224043	224043	Terrabacteria group	Firmicutes	2.96794	32.8	-	JBFR01	17	3171	3006	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381782	GCA_000536655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/655/GCA_000536655.1_Stap_aure_WMCA6100_V1	-	WMCA6100
Salmonella enterica subsp. enterica serovar Urbana	260677	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.95737	52.1	-	MZEE01	120	5153	4815	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265087	GCA_002047645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/645/GCA_002047645.1_ASM204764v1	-	2010K-2580
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.28009	50.7	-	LVRK01	336	5743	5182	4/18/16	2/25/17	Contig	JCVI	SAMN04393251	GCA_001621075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/075/GCA_001621075.1_ASM162107v1	-	GN04592
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36671	65.6	-	COTQ01	126	4295	4082	3/23/15	3/12/17	Scaffold	SC	SAMEA1403976	GCA_001384875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/875/GCA_001384875.1_7755_5_80	-	0923E
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.1225	39.7	-	CLQG01	88	2338	2107	3/21/15	3/11/17	Scaffold	SC	SAMEA1028952	GCA_001137965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/965/GCA_001137965.1_6949_4_2	-	SMRU2474
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.26249	39.9	-	CLDX01	62	2441	2227	3/21/15	3/10/17	Scaffold	SC	SAMEA1025943	GCA_001138025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/025/GCA_001138025.1_6899_5_3	-	SMRU2043
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.48617	64.8	-	COLP01	274	4377	4152	3/23/15	3/12/17	Scaffold	SC	SAMEA1403977	GCA_001384895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/895/GCA_001384895.1_7156_6_25	-	type strain: 1074
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.12261	50.5	-	LVRM01	126	5398	5062	4/18/16	2/25/17	Contig	JCVI	SAMN04393255	GCA_001621085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/085/GCA_001621085.1_ASM162108v1	-	GN04665
"Salmonella enterica subsp. enterica serovar 4,5,12:b:-"	1151171	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.73675	52.1	-	MZEH01	75	4842	4553	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265009	GCA_002047685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/685/GCA_002047685.1_ASM204768v1	-	2009K0262
Staphylococcus aureus COAS6117	1409720	PRJNA224042	224042	Terrabacteria group	Firmicutes	2.91146	32.8	-	JBFS01	21	3041	2870	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381781	GCA_000536675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/675/GCA_000536675.1_Stap_aure_COAS6117_V1	-	COAS6117
Staphylococcus aureus OCMM6125	1409705	PRJNA224027	224027	Terrabacteria group	Firmicutes	2.93816	32.8	-	JBGE01	32	3075	2893	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381766	GCA_000536695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/695/GCA_000536695.1_Stap_aure_OCMM6125_V1	-	OCMM6125
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.37777	51.8	-	MZEJ01	770	5615	5158	3/20/17	4/11/17	Contig	University of California at Davis	SAMN03359836	GCA_002047705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/705/GCA_002047705.1_ASM204770v1	-	BCW_6015
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.00167	50.6	-	LVRN01	273	5342	4822	4/18/16	2/25/17	Contig	JCVI	SAMN04393256	GCA_001621125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/125/GCA_001621125.1_ASM162112v1	-	GN04676
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36508	65.6	-	COOC01	105	4285	4078	3/23/15	3/12/17	Scaffold	SC	SAMEA1403978	GCA_001384915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/915/GCA_001384915.1_7314_8_71	-	0629K
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.98459	39.8	-	CQQJ01	37	2208	1986	3/22/15	3/11/17	Scaffold	SC	SAMEA970212	GCA_001138065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/065/GCA_001138065.1_5159_5_4	-	BHN605
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12719	39.5	-	CKPE01	74	2355	2134	3/21/15	3/11/17	Scaffold	SC	SAMEA1024673	GCA_001138125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/125/GCA_001138125.1_6680_5_14	-	SMRU926
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39556	65.6	-	COMM01	108	4306	4107	3/22/15	3/12/17	Scaffold	SC	SAMEA1403980	GCA_001384955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/384/955/GCA_001384955.1_7156_6_6	-	1065J
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.18954	50.5	-	LVRO01	200	5463	4998	4/18/16	2/25/17	Contig	JCVI	SAMN04393257	GCA_001621145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/145/GCA_001621145.1_ASM162114v1	-	GN04682
Salmonella enterica subsp. enterica serovar Inverness	913074	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.05071	52.1	-	MZEF01	68	5230	4919	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264911	GCA_002047715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/715/GCA_002047715.1_ASM204771v1	-	2010K-1605
Staphylococcus aureus LAMC6117	1409701	PRJNA224023	224023	Terrabacteria group	Firmicutes	2.92879	32.9	-	JBGI01	21	3084	2915	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381762	GCA_000536715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/715/GCA_000536715.1_Stap_aure_LAMC6117_V1	-	LAMC6117
Staphylococcus aureus OCMM6121	1409698	PRJNA224020	224020	Terrabacteria group	Firmicutes	2.94545	32.8	-	JBGL01	23	3104	2939	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381759	GCA_000536735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/735/GCA_000536735.1_Stap_aure_OCMM6121_V1	-	OCMM6121
Salmonella enterica subsp. enterica serovar Hvittingfoss	486994	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.71483	52.3	-	MZEG01	44	4738	4511	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265005	GCA_002047725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/725/GCA_002047725.1_ASM204772v1	-	2009K0809
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.59228	50.7	-	LVRP01	392	6137	5551	4/18/16	2/25/17	Contig	JCVI	SAMN04393258	GCA_001621165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/165/GCA_001621165.1_ASM162116v1	-	GN04729
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36995	65.6	-	CORT01	99	4291	4072	3/23/15	3/12/17	Scaffold	SC	SAMEA1403983	GCA_001385015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/015/GCA_001385015.1_7755_4_2	-	0609N
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.1214	39.5	-	CKNO01	64	2284	2022	3/21/15	3/11/17	Scaffold	SC	SAMEA1023817	GCA_001138165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/165/GCA_001138165.1_6664_1_14	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.02629	39.9	-	CPRC01	96	2149	1980	3/23/15	3/11/17	Scaffold	SC	SAMEA682469	GCA_001138185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/185/GCA_001138185.1_5366_5_1	-	08B05606
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36519	65.6	-	COWI01	103	4290	4078	3/23/15	3/12/17	Scaffold	SC	SAMEA1403984	GCA_001385035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/035/GCA_001385035.1_7769_8_65	-	1657C
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.206	50.6	-	LVRQ01	133	5423	5087	4/18/16	2/25/17	Contig	JCVI	SAMN04393259	GCA_001621175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/175/GCA_001621175.1_ASM162117v1	-	GN04741
Salmonella enterica subsp. enterica serovar Urbana	260677	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.01899	52.4	-	MZEI01	118	5191	4887	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264962	GCA_002047735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/735/GCA_002047735.1_ASM204773v1	-	08-0539
Staphylococcus aureus WMCA6091	1409697	PRJNA224019	224019	Terrabacteria group	Firmicutes	2.89915	32.7	-	JBGM01	11	3057	2895	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381758	GCA_000536755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/755/GCA_000536755.1_Stap_aure_WMCA6091_V1	-	WMCA6091
Staphylococcus aureus UCIM6134	1409695	PRJNA224017	224017	Terrabacteria group	Firmicutes	2.87896	32.7	-	JBGO01	13	3028	2873	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381756	GCA_000536775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/775/GCA_000536775.1_Stap_aure_UCIM6134_V1	-	UCIM6134
Salmonella enterica subsp. enterica serovar Uganda	487004	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80351	52.1	-	MZEM01	80	4914	4657	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264958	GCA_002047785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/785/GCA_002047785.1_ASM204778v1	-	05-0212
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.27636	50.7	-	LVRR01	420	5736	5123	4/18/16	2/25/17	Contig	JCVI	SAMN04393260	GCA_001621205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/205/GCA_001621205.1_ASM162120v1	-	GN04757
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.46163	65.6	-	COVU01	103	4414	4171	3/23/15	3/12/17	Scaffold	SC	SAMEA1403985	GCA_001385055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/055/GCA_001385055.1_7769_7_9	-	1188S
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.95224	39.7	-	CQQG01	45	2158	1951	3/23/15	3/11/17	Scaffold	SC	SAMEA970225	GCA_001138205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/205/GCA_001138205.1_5159_5_3	-	BHN604
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.19168	39.6	-	CPTY01	173	2393	2178	3/23/15	3/11/17	Scaffold	SC	SAMEA682252	GCA_001138285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/285/GCA_001138285.1_5390_1_4	-	spnIC28
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34746	65.6	-	COTS01	100	4272	4087	3/22/15	3/12/17	Scaffold	SC	SAMEA1403987	GCA_001385095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/095/GCA_001385095.1_7755_5_84	-	0963Y
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.0488	50.5	-	LVRS01	149	5250	4875	4/18/16	2/25/17	Contig	JCVI	SAMN04393261	GCA_001621225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/225/GCA_001621225.1_ASM162122v1	-	GN04772
Salmonella enterica subsp. enterica serovar Minnesota	70803	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.71225	52.1	-	MZEK01	65	4800	4545	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264931	GCA_002047795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/795/GCA_002047795.1_ASM204779v1	-	07-0808
Staphylococcus aureus WAMC6108	1409693	PRJNA224015	224015	Terrabacteria group	Firmicutes	2.89861	32.7	-	JBGQ01	9	3057	2888	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381754	GCA_000536795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/795/GCA_000536795.1_Stap_aure_WAMC6108_V1	-	WAMC6108
Staphylococcus aureus UCIM6126	1409689	PRJNA224011	224011	Terrabacteria group	Firmicutes	2.93599	32.8	-	JBGU01	10	3122	2961	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381750	GCA_000536815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/815/GCA_000536815.1_Stap_aure_UCIM6126_V1	-	UCIM6126
Salmonella enterica subsp. enterica serovar Kiambu	682797	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.48056	52.2	-	MZEN01	34	4504	4290	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265033	GCA_002047805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/805/GCA_002047805.1_ASM204780v1	-	04-0678
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.15015	50.8	-	LVRT01	195	5508	5058	4/18/16	2/25/17	Contig	JCVI	SAMN04393262	GCA_001621245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/245/GCA_001621245.1_ASM162124v1	-	GN04805
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35976	65.6	-	COXA01	120	4294	4063	3/23/15	3/12/17	Scaffold	SC	SAMEA1403988	GCA_001385115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/115/GCA_001385115.1_7769_8_87	-	type strain: 1741
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.01604	39.8	-	CPTT01	62	2191	1992	3/23/15	3/10/17	Scaffold	SC	SAMEA770012	GCA_001138385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/385/GCA_001138385.1_5192_8_6	-	10F/2
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12014	39.5	-	CKYN01	26	2337	2099	3/21/15	3/11/17	Scaffold	SC	SAMEA1025323	GCA_001138425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/425/GCA_001138425.1_6830_3_16	-	SMRU1648
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36297	65.6	-	CORZ01	85	4273	4084	3/23/15	3/12/17	Scaffold	SC	SAMEA1403989	GCA_001385135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/135/GCA_001385135.1_7755_4_27	-	0749Q
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.1449	50.6	-	LVRU01	109	5436	5092	4/18/16	2/25/17	Contig	JCVI	SAMN04393264	GCA_001621265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/265/GCA_001621265.1_ASM162126v1	-	GN04997
Salmonella enterica subsp. enterica serovar Inverness	913074	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80799	52.1	-	MZEO01	52	4923	4653	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264910	GCA_002047815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/815/GCA_002047815.1_ASM204781v1	-	04-0623
Staphylococcus aureus OCMM6110	1409686	PRJNA224008	224008	Terrabacteria group	Firmicutes	2.88608	32.8	-	JBGW01	18	3049	2873	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381747	GCA_000536835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/835/GCA_000536835.1_Stap_aure_OCMM6110_V1	-	OCMM6110
Staphylococcus aureus WMCA6084	1409682	PRJNA224004	224004	Terrabacteria group	Firmicutes	2.9421	32.8	-	JBGZ01	15	3121	2956	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381743	GCA_000536855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/855/GCA_000536855.1_Stap_aure_WMCA6084_V1	-	WMCA6084
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.86707	52.1	-	MZER01	43	5028	4700	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03359828	GCA_002047865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/865/GCA_002047865.1_ASM204786v1	-	BCW_6007
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.14567	50.8	-	LVRV01	195	5484	5036	4/18/16	2/25/17	Contig	JCVI	SAMN04393265	GCA_001621275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/275/GCA_001621275.1_ASM162127v1	-	GN05002
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36279	65.6	-	COTR01	116	4284	4082	3/22/15	3/12/17	Scaffold	SC	SAMEA1403990	GCA_001385155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/155/GCA_001385155.1_7755_5_82	-	0942A
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.12348	39.7	-	CPNZ01	100	2343	2146	3/22/15	3/10/17	Scaffold	SC	SAMEA770006	GCA_001138505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/505/GCA_001138505.1_5192_8_12	-	35C/3
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.037	39.7	-	CMCS01	48	2253	2033	3/21/15	3/10/17	Scaffold	SC	SAMEA1029303	GCA_001138525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/525/GCA_001138525.1_7004_8_88	-	SMRU2920
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37516	65.6	-	COLM01	95	4295	4094	3/22/15	3/12/17	Scaffold	SC	SAMEA1403991	GCA_001385175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/175/GCA_001385175.1_7156_6_23	-	type strain: 0890
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.2431	50.7	-	LVRW01	162	5598	5227	4/18/16	2/25/17	Contig	JCVI	SAMN04393266	GCA_001621305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/305/GCA_001621305.1_ASM162130v1	-	GN05044
Salmonella enterica subsp. enterica serovar Hvittingfoss	486994	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66659	52.2	-	MZES01	38	4733	4515	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265004	GCA_002047875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/875/GCA_002047875.1_ASM204787v1	-	99-0236
Staphylococcus aureus COAS6095	1409675	PRJNA223997	223997	Terrabacteria group	Firmicutes	2.89519	32.7	-	JBHF01	10	3050	2887	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381736	GCA_000536875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/875/GCA_000536875.1_Stap_aure_COAS6095_V1	-	COAS6095
Staphylococcus aureus WMCA6180	1409674	PRJNA223996	223996	Terrabacteria group	Firmicutes	2.87075	32.7	-	JBHG01	9	3026	2862	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381735	GCA_000536895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/895/GCA_000536895.1_Stap_aure_WMCA6180_V1	-	WMCA6180
Salmonella enterica subsp. enterica serovar Minnesota	70803	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.59554	52.2	-	MZEQ01	57	4630	4393	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264930	GCA_002047885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/885/GCA_002047885.1_ASM204788v1	-	03-0521
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.15326	50.8	-	LVRX01	271	5568	5068	4/18/16	2/25/17	Contig	JCVI	SAMN04393267	GCA_001621325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/325/GCA_001621325.1_ASM162132v1	-	GN05107
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3766	65.6	-	COWG01	116	4294	4103	3/23/15	3/12/17	Scaffold	SC	SAMEA1403992	GCA_001385195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/195/GCA_001385195.1_7769_8_66	-	1680C
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.0885	39.5	-	CKFL01	95	2321	2074	3/21/15	3/10/17	Scaffold	SC	SAMEA1024078	GCA_001138545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/545/GCA_001138545.1_6630_3_21	-	19B
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.16642	39.5	-	CPSZ01	82	2379	2148	3/23/15	3/10/17	Scaffold	SC	SAMEA1020322	GCA_001138565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/565/GCA_001138565.1_6289_7_22	-	SN4691
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36822	65.6	-	COPD01	92	4284	4097	3/23/15	3/12/17	Scaffold	SC	SAMEA1403993	GCA_001385215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/215/GCA_001385215.1_7755_2_25	-	0235G
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.00125	50.6	-	LVRY01	67	5172	4873	4/18/16	2/25/17	Contig	JCVI	SAMN04393268	GCA_001621345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/345/GCA_001621345.1_ASM162134v1	-	GN05109
Salmonella enterica subsp. enterica serovar Urbana	260677	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.99367	52.1	-	MZET01	158	5137	4835	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264961	GCA_002047895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/895/GCA_002047895.1_ASM204789v1	-	98-0248
Staphylococcus aureus FVRH6076	1409667	PRJNA223989	223989	Terrabacteria group	Firmicutes	2.97907	32.7	-	JBHL01	22	3150	2983	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381728	GCA_000536915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/915/GCA_000536915.1_Stap_aure_FVRH6076_V1	-	FVRH6076
Staphylococcus aureus LAMC6094	1409650	PRJNA223972	223972	Terrabacteria group	Firmicutes	2.93801	32.8	-	JBIB01	14	3110	2948	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381711	GCA_000536935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/935/GCA_000536935.1_Stap_aure_LAMC6094_V1	-	LAMC6094
Salmonella enterica subsp. enterica serovar Baildon	913068	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83833	52.1	-	MZAL01	70	4946	4710	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264865	GCA_002047945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/945/GCA_002047945.1_ASM204794v1	-	96-0126
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.02775	50.7	-	LVRZ01	213	5351	4879	4/18/16	2/25/17	Contig	JCVI	SAMN04393269	GCA_001621355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/355/GCA_001621355.1_ASM162135v1	-	GN05121
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36523	65.6	-	COTW01	110	4283	4082	3/23/15	3/12/17	Scaffold	SC	SAMEA1403995	GCA_001385235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/235/GCA_001385235.1_7755_5_83	-	0947F
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.05644	39.6	-	CKFA01	97	2243	1979	3/21/15	3/10/17	Scaffold	SC	SAMEA1024195	GCA_001138605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/605/GCA_001138605.1_6630_3_12	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.20243	39.6	-	CPLR01	111	2442	2186	3/23/15	3/11/17	Scaffold	SC	SAMEA1408205	GCA_001138625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/625/GCA_001138625.1_7444_8_40	-	0001+05003
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36247	65.6	-	COLN01	116	4292	4091	3/23/15	3/12/17	Scaffold	SC	SAMEA1403996	GCA_001385255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/255/GCA_001385255.1_7156_6_22	-	0878F
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.05381	50.6	-	LVSA01	180	5371	4926	4/18/16	2/25/17	Contig	JCVI	SAMN04393270	GCA_001621385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/385/GCA_001621385.1_ASM162138v1	-	GN05128
Salmonella enterica subsp. enterica serovar Alachua	913240	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.84438	52.1	-	MZAT01	56	4914	4651	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264977	GCA_002047955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/955/GCA_002047955.1_ASM204795v1	-	2010K-0732
Staphylococcus aureus UCIM6085	1409626	PRJNA223948	223948	Terrabacteria group	Firmicutes	2.89926	32.7	-	JBIW01	16	3062	2895	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381687	GCA_000536955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/955/GCA_000536955.1_Stap_aure_UCIM6085_V1	-	UCIM6085
Staphylococcus aureus SJOS6139	1409614	PRJNA223934	223934	Terrabacteria group	Firmicutes	2.90196	32.7	-	JBJF01	9	3059	2897	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381675	GCA_000536975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/975/GCA_000536975.1_Stap_aure_SJOS6139_V1	-	SJOS6139
Salmonella enterica subsp. enterica serovar Edinburgh	940231	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72232	52.1	-	MZAP01	80	4788	4471	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264889	GCA_002047965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/965/GCA_002047965.1_ASM204796v1	-	2012K-0034
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.01804	50.6	-	LVSB01	184	5255	4873	4/18/16	2/25/17	Contig	JCVI	SAMN04393272	GCA_001621405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/405/GCA_001621405.1_ASM162140v1	-	GN05225
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36473	65.6	-	CORH01	110	4289	4087	3/22/15	3/12/17	Scaffold	SC	SAMEA1403997	GCA_001385275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/275/GCA_001385275.1_7755_4_1	-	0608M
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12276	40	-	CKYV01	308	2426	2001	3/21/15	3/11/17	Scaffold	SC	SAMEA1025287	GCA_001138765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/765/GCA_001138765.1_6830_3_6	-	SMRU1638
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.08051	39.6	-	CKNC01	69	2275	2018	3/21/15	3/11/17	Scaffold	SC	SAMEA1024126	GCA_001138825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/825/GCA_001138825.1_6649_8_7	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3628	65.6	-	COME01	111	4286	4086	3/23/15	3/12/17	Scaffold	SC	SAMEA1403998	GCA_001385295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/295/GCA_001385295.1_7156_6_4	-	1060D
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.42548	50.8	-	LVSC01	267	5898	5386	4/18/16	2/25/17	Contig	JCVI	SAMN04393273	GCA_001621415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/415/GCA_001621415.1_ASM162141v1	-	GN05243
Salmonella enterica subsp. enterica serovar Eastbourne	486993	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66677	52.1	-	MZAD01	55	4765	4511	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264884	GCA_002047975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/047/975/GCA_002047975.1_ASM204797v1	-	03-0306
Staphylococcus aureus KINB6009	1409608	PRJNA223928	223928	Terrabacteria group	Firmicutes	2.93275	32.7	-	JBJK01	21	3093	2933	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381669	GCA_000536995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/536/995/GCA_000536995.1_Stap_aure_KINB6009_V1	-	KINB6009
Staphylococcus aureus LAMC6066	1409602	PRJNA223922	223922	Terrabacteria group	Firmicutes	2.89997	32.7	-	JBJQ01	12	3059	2903	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381663	GCA_000537015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/015/GCA_000537015.1_Stap_aure_LAMC6066_V1	-	LAMC6066
Salmonella enterica subsp. enterica serovar Eastbourne	486993	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66242	52.1	-	MZAY01	47	4748	4480	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265069	GCA_002048025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/025/GCA_002048025.1_ASM204802v1	-	08-0196
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.04204	50.5	-	LVSD01	206	5418	4911	4/18/16	2/25/17	Contig	JCVI	SAMN04393274	GCA_001621435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/435/GCA_001621435.1_ASM162143v1	-	GN05274
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36721	65.6	-	CORW01	115	4301	4075	3/23/15	3/12/17	Scaffold	SC	SAMEA1403999	GCA_001385315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/315/GCA_001385315.1_7755_4_26	-	0748P
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.05216	39.5	-	CRLA01	68	2246	2036	3/22/15	3/10/17	Scaffold	SC	SAMEA1025611	GCA_001138845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/845/GCA_001138845.1_6753_4_3	-	SMRU1539
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.18659	39.6	-	CLVC01	67	2405	2179	3/21/15	3/11/17	Scaffold	SC	SAMEA1025995	GCA_001138865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/865/GCA_001138865.1_6983_3_49	-	SMRU2257
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36601	65.6	-	COWY01	121	4308	4081	3/23/15	3/12/17	Scaffold	SC	SAMEA1404001	GCA_001385335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/335/GCA_001385335.1_7769_8_85	-	1739R
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.01745	50.7	-	LVSE01	209	5379	4879	4/18/16	2/25/17	Contig	JCVI	SAMN04393275	GCA_001621465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/465/GCA_001621465.1_ASM162146v1	-	GN05367
Salmonella enterica subsp. enterica serovar Ealing	1962638	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7981	52	-	MZBC01	75	4907	4641	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264881	GCA_002048035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/035/GCA_002048035.1_ASM204803v1	-	06-0782
Staphylococcus aureus SJUD6118	1409597	PRJNA223917	223917	Terrabacteria group	Firmicutes	2.92506	32.9	-	JBJV01	30	3076	2906	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381658	GCA_000537035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/035/GCA_000537035.1_Stap_aure_SJUD6118_V1	-	SJUD6118
Staphylococcus aureus SJUD6114	1409595	PRJNA223915	223915	Terrabacteria group	Firmicutes	2.86161	32.7	-	JBJX01	15	2995	2834	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381656	GCA_000537055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/055/GCA_000537055.1_Stap_aure_SJUD6114_V1	-	SJUD6114
Salmonella enterica subsp. enterica serovar Cubana	189201	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.97152	52.1	-	MZBA01	105	5111	4801	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264999	GCA_002048065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/065/GCA_002048065.1_ASM204806v1	-	07-0717
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.14775	50.7	-	LVSG01	216	5535	5032	4/18/16	2/25/17	Contig	JCVI	SAMN04393277	GCA_001621485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/485/GCA_001621485.1_ASM162148v1	-	GN05426
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.40034	65.6	-	COWW01	114	4310	4107	3/23/15	3/12/17	Scaffold	SC	SAMEA1404003	GCA_001385375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/375/GCA_001385375.1_7769_8_84	-	1738Q
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.17535	39.5	-	CLKZ01	51	2404	2193	3/21/15	3/4/17	Scaffold	SC	SAMEA1028934	GCA_001138925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/925/GCA_001138925.1_6938_5_22	-	SMRU2662
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.04	39.7	-	CRDO01	70	2249	2030	3/22/15	3/4/17	Scaffold	SC	SAMEA1024801	GCA_001138945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/945/GCA_001138945.1_6731_4_18	-	SMRU1074
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36959	65.6	-	COOE01	98	4292	4082	3/23/15	3/12/17	Scaffold	SC	SAMEA1404005	GCA_001385415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/415/GCA_001385415.1_7314_8_75	-	0860L
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	4.84082	50.8	-	LVSF01	244	5165	4664	4/18/16	2/25/17	Contig	JCVI	SAMN04393276	GCA_001621505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/505/GCA_001621505.1_ASM162150v1	-	GN05377
Salmonella enterica subsp. enterica serovar Lomalinda	1967650	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.58452	52.2	-	MZBD01	87	4678	4357	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265044	GCA_002048075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/075/GCA_002048075.1_ASM204807v1	-	06-0457
Staphylococcus aureus OCMM6065	1409587	PRJNA223907	223907	Terrabacteria group	Firmicutes	2.94436	32.8	-	JBKF01	11	3128	2963	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381648	GCA_000537075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/075/GCA_000537075.1_Stap_aure_OCMM6065_V1	-	OCMM6065
Staphylococcus aureus HSOU6002	1409586	PRJNA223906	223906	Terrabacteria group	Firmicutes	2.88835	32.7	-	JBKG01	13	3036	2874	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381647	GCA_000537095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/095/GCA_000537095.1_Stap_aure_HSOU6002_V1	-	HSOU6002
Salmonella enterica subsp. enterica serovar Albany	211968	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72761	52.1	-	MZBG01	41	4761	4535	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264983	GCA_002048105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/105/GCA_002048105.1_ASM204810v1	-	70-0076
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.22584	50.7	-	LVSH01	220	5585	5127	4/18/16	2/25/17	Contig	JCVI	SAMN04393278	GCA_001621515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/515/GCA_001621515.1_ASM162151v1	-	GN05443
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35994	65.6	-	COSB01	111	4287	4081	3/22/15	3/12/17	Scaffold	SC	SAMEA1404010	GCA_001385455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/455/GCA_001385455.1_7755_4_3	-	0616W
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.07556	39.5	-	CMMO01	40	2287	2057	3/22/15	3/15/17	Scaffold	SC	SAMEA1029412	GCA_001138965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/965/GCA_001138965.1_7068_4_21	-	SMRU3141
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08136	39.5	-	CIMT01	89	2282	2063	3/21/15	3/4/17	Scaffold	SC	SAMEA1024895	GCA_001138985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/985/GCA_001138985.1_6731_5_6	-	SMRU1086
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3645	65.6	-	COWX01	125	4294	4084	3/22/15	3/12/17	Scaffold	SC	SAMEA1404011	GCA_001385475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/475/GCA_001385475.1_7769_8_83	-	1737P
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.27994	50.7	-	LVSI01	245	5698	5281	4/18/16	2/25/17	Contig	JCVI	SAMN04393279	GCA_001621545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/545/GCA_001621545.1_ASM162154v1	-	GN05505
Salmonella enterica subsp. enterica serovar Chester	149386	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.64112	52.2	-	MZBP01	124	4781	4464	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264878	GCA_002048115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/115/GCA_002048115.1_ASM204811v1	-	05-0274
Staphylococcus aureus SJUD6104	1409570	PRJNA223890	223890	Terrabacteria group	Firmicutes	2.92338	32.9	-	JBKV01	18	3080	2905	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381631	GCA_000537115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/115/GCA_000537115.1_Stap_aure_SJUD6104_V1	-	SJUD6104
Staphylococcus aureus SMMC6087	1409564	PRJNA223884	223884	Terrabacteria group	Firmicutes	2.86513	32.8	-	JBLA01	9	3023	2862	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381625	GCA_000537135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/135/GCA_000537135.1_Stap_aure_SMMC6087_V1	-	SMMC6087
Salmonella enterica subsp. enterica serovar Chester	149386	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.62869	52.2	-	MZBK01	343	4885	4428	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264880	GCA_002048125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/125/GCA_002048125.1_ASM204812v1	-	58-1506
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.12796	50.7	-	LVSJ01	243	5521	5009	4/18/16	2/25/17	Contig	JCVI	SAMN04393280	GCA_001621565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/565/GCA_001621565.1_ASM162156v1	-	GN05509
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37375	65.6	-	COOG01	101	4288	4081	3/23/15	3/12/17	Scaffold	SC	SAMEA1404012	GCA_001385495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/495/GCA_001385495.1_7314_8_72	-	0710Y
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08963	39.7	-	CLIX01	42	2268	2026	3/21/15	3/15/17	Scaffold	SC	SAMEA1029001	GCA_001139125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/125/GCA_001139125.1_6925_7_19	-	SMRU2515
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1096	39.4	-	CLED01	69	2361	2117	3/21/15	3/4/17	Scaffold	SC	SAMEA1025905	GCA_001139165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/165/GCA_001139165.1_6899_5_6	-	SMRU2046
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37299	65.6	-	COPX01	138	4322	4092	3/23/15	3/12/17	Scaffold	SC	SAMEA1404013	GCA_001385515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/515/GCA_001385515.1_7755_2_45	-	0307K
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.26232	50.8	-	LVSK01	283	5691	5199	4/18/16	2/25/17	Contig	JCVI	SAMN04393281	GCA_001621575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/575/GCA_001621575.1_ASM162157v1	-	GN05516
Salmonella enterica subsp. enterica serovar Indiana	286783	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.73939	52.1	-	MZBL01	74	4805	4559	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265017	GCA_002048175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/175/GCA_002048175.1_ASM204817v1	-	56-2070
Staphylococcus aureus SJOS6106	1409562	PRJNA223882	223882	Terrabacteria group	Firmicutes	2.94463	32.8	-	JBLC01	17	3106	2938	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381623	GCA_000537155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/155/GCA_000537155.1_Stap_aure_SJOS6106_V1	-	SJOS6106
Staphylococcus aureus UCIM6057	1409556	PRJNA223876	223876	Terrabacteria group	Firmicutes	2.90058	32.7	-	JBPA01	10	3061	2893	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381617	GCA_000537175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/175/GCA_000537175.1_Stap_aure_UCIM6057_V1	-	UCIM6057
Salmonella enterica subsp. enterica serovar Oslo	1005394	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.9245	52.2	-	MZBU01	60	5024	4753	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264944	GCA_002048195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/195/GCA_002048195.1_ASM204819v1	-	00-0276
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.33984	50.6	-	LVSL01	328	5779	5193	4/18/16	2/25/17	Contig	JCVI	SAMN04393282	GCA_001621585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/585/GCA_001621585.1_ASM162158v1	-	GN05554
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36502	65.6	-	COSQ01	113	4308	4082	3/22/15	3/12/17	Scaffold	SC	SAMEA1404014	GCA_001385535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/535/GCA_001385535.1_7755_4_7	-	0667B
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12665	39.7	-	CMRR01	44	2380	2153	3/23/15	3/4/17	Scaffold	SC	SAMEA2062174	GCA_001139185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/185/GCA_001139185.1_9803_8_48	-	6A
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.14267	39.7	-	CMUT01	79	2329	2016	3/23/15	3/15/17	Scaffold	SC	SAMEA1022864	GCA_001139205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/205/GCA_001139205.1_5737_7_7	-	167
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36452	65.6	-	COZJ01	125	4305	4082	3/23/15	3/12/17	Scaffold	SC	SAMEA1404015	GCA_001385555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/555/GCA_001385555.1_7841_7_84	-	2049D
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	4.93346	50.8	-	LVSM01	152	5128	4752	4/18/16	2/25/17	Contig	JCVI	SAMN04393283	GCA_001621625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/625/GCA_001621625.1_ASM162162v1	-	GN05556
Salmonella enterica subsp. enterica serovar Indiana	286783	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.85463	52	-	MZBX01	909	5317	4587	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265014	GCA_002048205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/205/GCA_002048205.1_ASM204820v1	-	96-0276
Staphylococcus aureus PLAC6024	1409553	PRJNA223873	223873	Terrabacteria group	Firmicutes	2.89732	32.8	-	JBPD01	22	3045	2885	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381614	GCA_000537195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/195/GCA_000537195.1_Stap_aure_PLAC6024_V1	-	PLAC6024
Staphylococcus aureus HOAG6042	1409549	PRJNA223869	223869	Terrabacteria group	Firmicutes	2.91597	32.8	-	JBPF01	37	3071	2890	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381610	GCA_000537215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/215/GCA_000537215.1_Stap_aure_HOAG6042_V1	-	HOAG6042
Salmonella enterica subsp. enterica serovar Havana	179997	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83996	52.2	-	MZCN01	431	5134	4611	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264906	GCA_002048245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/245/GCA_002048245.1_ASM204824v1	-	82-0493
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	4.77811	50.7	-	LVSN01	222	5061	4596	4/18/16	2/25/17	Contig	JCVI	SAMN04393284	GCA_001621645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/645/GCA_001621645.1_ASM162164v1	-	GN05625
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36597	65.6	-	COVC01	109	4290	4087	3/23/15	3/12/17	Scaffold	SC	SAMEA1404016	GCA_001385575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/575/GCA_001385575.1_7769_7_31	-	1371R
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12025	39.6	-	CLWS01	89	2342	2126	3/21/15	3/4/17	Scaffold	SC	SAMEA1028871	GCA_001139225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/225/GCA_001139225.1_6983_5_10	-	SMRU2314
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.2356	39.4	-	CKXM01	67	2476	2205	3/21/15	3/4/17	Scaffold	SC	SAMEA1026227	GCA_001139265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/265/GCA_001139265.1_6823_6_5	-	SMRU1973
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36758	65.6	-	COWV01	103	4291	4078	3/23/15	3/12/17	Scaffold	SC	SAMEA1404017	GCA_001385595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/595/GCA_001385595.1_7769_8_82	-	1736N
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	4.96612	50.7	-	LVSP01	204	5242	4821	4/18/16	2/25/17	Contig	JCVI	SAMN04393286	GCA_001621665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/665/GCA_001621665.1_ASM162166v1	-	GN05696
Salmonella enterica subsp. enterica serovar Worthington	1160769	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.08883	51.9	-	MZCJ01	75	5207	4907	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265076	GCA_002048255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/255/GCA_002048255.1_ASM204825v1	-	07-0264
Staphylococcus aureus SJUD6022	1409533	PRJNA223853	223853	Terrabacteria group	Firmicutes	2.90055	32.7	-	JBPS01	13	3057	2892	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381594	GCA_000537235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/235/GCA_000537235.1_Stap_aure_SJUD6022_V1	-	SJUD6022
Staphylococcus aureus HOAG6034	1409528	PRJNA223848	223848	Terrabacteria group	Firmicutes	2.89518	32.8	-	JBPX01	20	3047	2884	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381589	GCA_000537255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/255/GCA_000537255.1_Stap_aure_HOAG6034_V1	-	HOAG6034
Salmonella enterica subsp. enterica serovar Grumpensis	260681	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.53327	52.2	-	MZCL01	60	4559	4309	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264897	GCA_002048265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/265/GCA_002048265.1_ASM204826v1	-	06-0487
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.15659	50.4	-	LVSO01	117	5376	5020	4/18/16	2/25/17	Contig	JCVI	SAMN04393285	GCA_001621675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/675/GCA_001621675.1_ASM162167v1	-	GN05681
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36852	65.6	-	COOH01	87	4279	4079	3/22/15	3/12/17	Scaffold	SC	SAMEA1404018	GCA_001385615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/615/GCA_001385615.1_7314_8_73	-	0734Z
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12945	39.6	-	CMHX01	72	2316	2099	3/22/15	3/4/17	Scaffold	SC	SAMEA1029422	GCA_001139285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/285/GCA_001139285.1_7038_6_17	-	SMRU2993
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21752	39.6	-	CPSV01	101	2457	2209	3/23/15	3/4/17	Scaffold	SC	SAMEA1408328	GCA_001139305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/305/GCA_001139305.1_7444_8_16	-	9705+05087
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3682	65.6	-	COSP01	115	4303	4083	3/23/15	3/12/17	Scaffold	SC	SAMEA1404021	GCA_001385655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/655/GCA_001385655.1_7755_4_6	-	0653L
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.27845	50.7	-	LVSQ01	359	5800	5196	4/18/16	2/25/17	Contig	JCVI	SAMN04393287	GCA_001621705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/705/GCA_001621705.1_ASM162170v1	-	GN02597
Salmonella enterica subsp. enterica serovar London	149390	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.74928	52.2	-	MZCP01	95	4830	4583	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264922	GCA_002048305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/305/GCA_002048305.1_ASM204830v1	-	90-0264
Staphylococcus aureus AGEN6010	1409515	PRJNA223835	223835	Terrabacteria group	Firmicutes	2.90686	32.7	-	JBQD01	15	3070	2897	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381576	GCA_000537275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/275/GCA_000537275.1_Stap_aure_AGEN6010_V1	-	AGEN6010
Staphylococcus aureus SCLE6005	1409513	PRJNA223833	223833	Terrabacteria group	Firmicutes	2.93592	32.8	-	JBQF01	20	3106	2942	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381574	GCA_000537295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/295/GCA_000537295.1_Stap_aure_SCLE6005_V1	-	SCLE6005
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.06369	51.9	-	MZCY01	221	5183	4892	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265061	GCA_002048325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/325/GCA_002048325.1_ASM204832v1	-	05-0484
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.17984	50.8	-	LVSR01	360	5645	5066	4/18/16	2/25/17	Contig	JCVI	SAMN04393288	GCA_001621725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/725/GCA_001621725.1_ASM162172v1	-	GN05826
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.49387	65.5	-	COWU01	164	4449	4190	3/22/15	3/12/17	Scaffold	SC	SAMEA1404022	GCA_001385675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/675/GCA_001385675.1_7769_8_81	-	1735M
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.16527	39.5	-	CMAW01	47	2407	2156	3/21/15	3/4/17	Scaffold	SC	SAMEA1028706	GCA_001139425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/425/GCA_001139425.1_7004_6_31	-	SMRU2839
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.18763	39.7	-	CMQC01	100	2429	2184	3/23/15	3/4/17	Scaffold	SC	SAMEA2061732	GCA_001139445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/445/GCA_001139445.1_9803_7_81	-	6B
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36501	65.6	-	COZF01	99	4290	4085	3/23/15	3/12/17	Scaffold	SC	SAMEA1404023	GCA_001385695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/695/GCA_001385695.1_7841_7_85	-	2050E
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.06268	50.7	-	LVSS01	215	5378	4907	4/18/16	2/25/17	Contig	JCVI	SAMN04393289	GCA_001621745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/745/GCA_001621745.1_ASM162174v1	-	GN05829
Salmonella enterica subsp. enterica serovar Havana	179997	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.94375	52.1	-	MZCZ01	70	5044	4779	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264904	GCA_002048335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/335/GCA_002048335.1_ASM204833v1	-	05-0425
Staphylococcus aureus AGEN6009	1409492	PRJNA223812	223812	Terrabacteria group	Firmicutes	2.9062	32.9	-	JBQV01	20	3064	2899	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381553	GCA_000537315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/315/GCA_000537315.1_Stap_aure_AGEN6009_V1	-	AGEN6009
Staphylococcus aureus WAMC6003	1409491	PRJNA223811	223811	Terrabacteria group	Firmicutes	2.92247	32.8	-	JBQW01	39	3070	2909	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381552	GCA_000537335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/335/GCA_000537335.1_Stap_aure_WAMC6003_V1	-	WAMC6003
Salmonella enterica subsp. enterica serovar Bredeney	134047	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.82183	52	-	MZDA01	53	4943	4661	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264872	GCA_002048365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/365/GCA_002048365.1_ASM204836v1	-	04-0041
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.28276	50.9	-	LVST01	309	5717	5176	4/18/16	2/25/17	Contig	JCVI	SAMN04393290	GCA_001621755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/755/GCA_001621755.1_ASM162175v1	-	GN05833
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36739	65.6	-	COSN01	118	4307	4089	3/22/15	3/12/17	Scaffold	SC	SAMEA1404024	GCA_001385715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/715/GCA_001385715.1_7755_4_5	-	0639W
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.22477	39.6	-	CPOI01	96	2464	2213	3/23/15	3/11/17	Scaffold	SC	SAMEA1408212	GCA_001139465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/465/GCA_001139465.1_7444_8_86	-	0505+04001
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99426	39.7	-	CQQK01	42	2216	1996	3/23/15	3/10/17	Scaffold	SC	SAMEA970231	GCA_001139525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/525/GCA_001139525.1_5159_5_8	-	BHN609
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36723	65.6	-	COVB01	100	4291	4084	3/22/15	3/12/17	Scaffold	SC	SAMEA1404025	GCA_001385735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/735/GCA_001385735.1_7769_7_32	-	1391N
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.24873	50.5	-	LVSU01	155	5521	5153	4/18/16	2/25/17	Contig	JCVI	SAMN04393291	GCA_001621765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/765/GCA_001621765.1_ASM162176v1	-	GN05843
Salmonella enterica subsp. enterica serovar Johannesburg	913076	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.82695	52.2	-	MZDB01	98	4938	4643	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264914	GCA_002048385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/385/GCA_002048385.1_ASM204838v1	-	03-0645
Staphylococcus aureus COAS6004	1409489	PRJNA223809	223809	Terrabacteria group	Firmicutes	2.89386	32.9	-	JBQY01	17	3038	2872	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381550	GCA_000537355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/355/GCA_000537355.1_Stap_aure_COAS6004_V1	-	COAS6004
Staphylococcus aureus COAS6001	1409487	PRJNA223807	223807	Terrabacteria group	Firmicutes	2.89501	32.7	-	JBRA01	9	3051	2891	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381548	GCA_000537375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/375/GCA_000537375.1_Stap_aure_COAS6001_V1	-	COAS6001
Salmonella enterica subsp. enterica serovar Johannesburg	913076	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.67764	52.3	-	MZDD01	82	4818	4549	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264913	GCA_002048395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/395/GCA_002048395.1_ASM204839v1	-	01-0146
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.18013	50.7	-	LVSV01	211	5521	5089	4/18/16	2/25/17	Contig	JCVI	SAMN04393292	GCA_001621805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/805/GCA_001621805.1_ASM162180v1	-	GN05855
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36797	65.6	-	COPQ01	123	4299	4078	3/23/15	3/12/17	Scaffold	SC	SAMEA1404026	GCA_001385755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/755/GCA_001385755.1_7755_2_47	-	0311P
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.07956	39.8	-	CPSY01	258	2246	2075	3/23/15	3/11/17	Scaffold	SC	SAMEA682329	GCA_001139565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/565/GCA_001139565.1_5381_1_12	-	09B03357
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.1077	39.4	-	CKBG01	62	2357	2107	3/21/15	3/11/17	Scaffold	SC	SAMEA974655	GCA_001139605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/605/GCA_001139605.1_6259_8_11	-	10B
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.40353	65.6	-	COWT01	105	4323	4118	3/23/15	3/12/17	Scaffold	SC	SAMEA1404028	GCA_001385795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/795/GCA_001385795.1_7769_8_80	-	1732J
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.12192	50.7	-	LVSW01	160	5493	5100	4/18/16	2/25/17	Contig	JCVI	SAMN04393293	GCA_001621825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/825/GCA_001621825.1_ASM162182v1	-	GN05865
Salmonella enterica subsp. enterica serovar Bredeney	134047	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.64946	52.1	-	MZDJ01	53	4723	4487	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264870	GCA_002048415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/415/GCA_002048415.1_ASM204841v1	-	2012K-1362
Staphylococcus aureus SMMC6030	1409483	PRJNA223803	223803	Terrabacteria group	Firmicutes	2.91266	32.8	-	JBRE01	48	3069	2883	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381544	GCA_000537395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/395/GCA_000537395.1_Stap_aure_SMMC6030_V1	-	SMMC6030
Staphylococcus aureus LAMC0016	1409482	PRJNA223802	223802	Terrabacteria group	Firmicutes	2.92329	32.8	-	JBRF01	14	3071	2899	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381543	GCA_000537415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/415/GCA_000537415.1_Stap_aure_LAMC0016_V1	-	LAMC0016
Salmonella enterica subsp. enterica serovar Telelkebir	1967657	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.61374	52.2	-	MZCV01	68	4633	4359	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265066	GCA_002048425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/425/GCA_002048425.1_ASM204842v1	-	72-0480
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.20885	50.8	-	LVSX01	216	5558	5119	4/18/16	2/25/17	Contig	JCVI	SAMN04393294	GCA_001621835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/835/GCA_001621835.1_ASM162183v1	-	GN05885
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36694	65.6	-	COSY01	108	4295	4087	3/23/15	3/12/17	Scaffold	SC	SAMEA1404029	GCA_001385815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/815/GCA_001385815.1_7755_5_54	-	0820S
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.07573	39.5	-	CMKF01	73	2269	2044	3/22/15	3/11/17	Scaffold	SC	SAMEA1029227	GCA_001139665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/665/GCA_001139665.1_7054_4_12	-	SMRU3036
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.23942	39.4	-	CLMK01	70	2474	2213	3/21/15	3/11/17	Scaffold	SC	SAMEA1028815	GCA_001139685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/685/GCA_001139685.1_6938_7_17	-	SMRU2705
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.41331	65.6	-	COYZ01	94	4346	4151	3/23/15	3/12/17	Scaffold	SC	SAMEA1404030	GCA_001385835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/835/GCA_001385835.1_7841_7_72	-	2013P
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.16698	50.8	-	LVSY01	271	5588	5056	4/18/16	2/25/17	Contig	JCVI	SAMN04393295	GCA_001621855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/855/GCA_001621855.1_ASM162185v1	-	GN05918
Salmonella enterica subsp. enterica serovar Telelkebir	1967657	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.768	52.1	-	MZDK01	75	4854	4573	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265063	GCA_002048465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/465/GCA_002048465.1_ASM204846v1	-	2011K-0078
Staphylococcus aureus FVRH6001	1409449	PRJNA223769	223769	Terrabacteria group	Firmicutes	2.92786	32.9	-	JBSM01	25	3091	2925	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381510	GCA_000537435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/435/GCA_000537435.1_Stap_aure_FVRH6001_V1	-	FVRH6001
Staphylococcus aureus AMMC6073	1409441	PRJNA223761	223761	Terrabacteria group	Firmicutes	2.82797	32.8	-	JBLJ01	23	2937	2783	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381502	GCA_000537455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/455/GCA_000537455.1_Stap_aure_AMMC6073_V1	-	AMMC6073
Salmonella enterica subsp. enterica serovar Minnesota	70803	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.59173	52.2	-	MZDR01	83	4649	4393	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264933	GCA_002048475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/475/GCA_002048475.1_ASM204847v1	-	90-0129
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.07189	50.5	-	LVSZ01	228	5406	4947	4/18/16	2/25/17	Contig	JCVI	SAMN04393296	GCA_001621885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/885/GCA_001621885.1_ASM162188v1	-	GN05963
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36531	65.6	-	COPW01	130	4297	4072	3/22/15	3/12/17	Scaffold	SC	SAMEA1404031	GCA_001385855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/855/GCA_001385855.1_7755_2_48	-	0312Q
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.0468	39.5	-	CMHE01	63	2253	2034	3/23/15	3/11/17	Scaffold	SC	SAMEA1029239	GCA_001139725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/725/GCA_001139725.1_7038_5_19	-	SMRU2971
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.06168	39.7	-	CRDP01	44	2286	2063	3/23/15	3/11/17	Scaffold	SC	SAMEA1024875	GCA_001139765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/765/GCA_001139765.1_6731_4_17	-	SMRU1073
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.40339	65.6	-	COMS01	95	4295	4108	3/23/15	3/12/17	Scaffold	SC	SAMEA1404032	GCA_001385875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/875/GCA_001385875.1_7156_7_53	-	1292F
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.25017	50.6	-	LVTB01	213	5576	5243	4/18/16	2/25/17	Contig	JCVI	SAMN04393298	GCA_001621905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/905/GCA_001621905.1_ASM162190v1	-	GN06007
Salmonella enterica subsp. enterica serovar Bredeney	134047	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.73795	52	-	MZDM01	57	4822	4552	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264869	GCA_002048505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/505/GCA_002048505.1_ASM204850v1	-	08-1537
Staphylococcus aureus OCMM6047	1409435	PRJNA223755	223755	Terrabacteria group	Firmicutes	2.90698	32.9	-	JBLP01	19	3056	2887	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381496	GCA_000537475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/475/GCA_000537475.1_Stap_aure_OCMM6047_V1	-	OCMM6047
Staphylococcus aureus SJOS6098	1409429	PRJNA223749	223749	Terrabacteria group	Firmicutes	2.9805	32.8	-	JBLV01	17	3192	3021	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381490	GCA_000537495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/495/GCA_000537495.1_Stap_aure_SJOS6098_V1	-	SJOS6098
Salmonella enterica subsp. enterica serovar Havana	179997	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.85929	52.2	-	MZDQ01	70	4954	4676	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264902	GCA_002048515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/515/GCA_002048515.1_ASM204851v1	-	06-0477
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	4.96124	50.5	-	LVTA01	57	5097	4800	4/18/16	2/25/17	Contig	JCVI	SAMN04393297	GCA_001621915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/915/GCA_001621915.1_ASM162191v1	-	GN05992
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36633	65.6	-	COSU01	120	4282	4082	3/23/15	3/12/17	Scaffold	SC	SAMEA1404033	GCA_001385895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/895/GCA_001385895.1_7755_5_53	-	0805B
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12918	39.6	-	CMRT01	76	2307	2039	3/23/15	3/11/17	Scaffold	SC	SAMEA2061749	GCA_001139805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/805/GCA_001139805.1_9803_8_52	-	19C
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07009	39.6	-	CKNE01	58	2276	2065	3/21/15	3/10/17	Scaffold	SC	SAMEA1024104	GCA_001139845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/845/GCA_001139845.1_6649_8_5	-	11A
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36708	65.6	-	COVA01	111	4291	4076	3/22/15	3/12/17	Scaffold	SC	SAMEA1404035	GCA_001385915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/915/GCA_001385915.1_7769_7_30	-	1366L
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.18448	50.7	-	LVTC01	196	5448	5080	4/18/16	2/25/17	Contig	JCVI	SAMN04393299	GCA_001621945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/945/GCA_001621945.1_ASM162194v1	-	GN06028
Salmonella enterica subsp. enterica serovar Urbana	260677	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72684	52.2	-	MZDS01	39	4788	4523	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264964	GCA_002048525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/525/GCA_002048525.1_ASM204852v1	-	91-0320
Staphylococcus aureus COAS6039	1409428	PRJNA223748	223748	Terrabacteria group	Firmicutes	2.89925	32.7	-	JBLW01	11	3057	2897	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381489	GCA_000537515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/515/GCA_000537515.1_Stap_aure_COAS6039_V1	-	COAS6039
Staphylococcus aureus CHOC6045	1409416	PRJNA223736	223736	Terrabacteria group	Firmicutes	2.93254	32.7	-	JBMG01	14	3117	2957	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381477	GCA_000537535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/535/GCA_000537535.1_Stap_aure_CHOC6045_V1	-	CHOC6045
Salmonella enterica subsp. enterica serovar Urbana	260677	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.82302	52.2	-	MZDU01	479	4843	4562	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264963	GCA_002048565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/565/GCA_002048565.1_ASM204856v1	-	81-2806
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.22114	50.7	-	LVTD01	206	5599	5165	4/18/16	2/25/17	Contig	JCVI	SAMN04393300	GCA_001621965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/965/GCA_001621965.1_ASM162196v1	-	GN06039
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35554	65.6	-	COPS01	105	4281	4080	3/23/15	3/12/17	Scaffold	SC	SAMEA1404038	GCA_001385935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/935/GCA_001385935.1_7755_3_49	-	0319Y
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.03543	39.6	-	CKHZ01	69	2234	2024	3/21/15	3/11/17	Scaffold	SC	SAMEA1023934	GCA_001139865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/865/GCA_001139865.1_6631_3_19	-	7F
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.05673	39.6	-	CLFT01	78	2244	1994	3/21/15	3/11/17	Scaffold	SC	SAMEA1026036	GCA_001139885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/885/GCA_001139885.1_6899_7_8	-	SMRU2096
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36671	65.6	-	COMR01	108	4294	4076	3/23/15	3/12/17	Scaffold	SC	SAMEA1404041	GCA_001385975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/975/GCA_001385975.1_7156_7_51	-	0779Y
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.00502	50.7	-	LVTE01	173	5316	4870	4/18/16	2/25/17	Contig	JCVI	SAMN04393301	GCA_001621975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/975/GCA_001621975.1_ASM162197v1	-	GN06047
Salmonella enterica subsp. enterica serovar Minnesota	70803	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.63316	52.2	-	MZDV01	179	4669	4414	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264932	GCA_002048585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/585/GCA_002048585.1_ASM204858v1	-	58-5769
Staphylococcus aureus PLAC6019	1409415	PRJNA223735	223735	Terrabacteria group	Firmicutes	2.88342	32.8	-	JBMH01	21	3013	2832	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381476	GCA_000537555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/555/GCA_000537555.1_Stap_aure_PLAC6019_V1	-	PLAC6019
Staphylococcus aureus TUSH6001	1409412	PRJNA223732	223732	Terrabacteria group	Firmicutes	2.90089	32.7	-	JBMK01	10	3060	2894	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381473	GCA_000537575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/575/GCA_000537575.1_Stap_aure_TUSH6001_V1	-	TUSH6001
Salmonella enterica subsp. enterica serovar Kiambu	682797	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.58648	52.1	-	MZEL01	333	4595	4364	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265034	GCA_002048595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/595/GCA_002048595.1_ASM204859v1	-	07-0618
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.14723	50.5	-	LVTF01	251	5483	4976	4/18/16	2/25/17	Contig	JCVI	SAMN04393302	GCA_001621995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/621/995/GCA_001621995.1_ASM162199v1	-	GN06113
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37149	65.6	-	COSX01	99	4295	4079	3/23/15	3/12/17	Scaffold	SC	SAMEA1404042	GCA_001385995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/385/995/GCA_001385995.1_7755_5_57	-	0823W
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04282	39.7	-	CKAK01	60	2250	2019	3/21/15	3/11/17	Scaffold	SC	SAMEA974622	GCA_001139905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/905/GCA_001139905.1_6259_6_2	-	17F
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.20664	39.6	-	CPRD01	97	2449	2205	3/23/15	3/11/17	Scaffold	SC	SAMEA1408202	GCA_001139925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/925/GCA_001139925.1_7444_8_38	-	9911+18139
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36586	65.6	-	COYX01	119	4292	4077	3/23/15	3/12/17	Scaffold	SC	SAMEA1404043	GCA_001386015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/015/GCA_001386015.1_7841_7_69	-	2010L
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.34116	50.7	-	LVTG01	230	5736	5337	4/18/16	2/25/17	Contig	JCVI	SAMN04393303	GCA_001622025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/025/GCA_001622025.1_ASM162202v1	-	GN06124
"Salmonella enterica subsp. enterica serovar 4,5,12:b:-"	1151171	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.79712	52.1	-	MZEP01	157	4904	4650	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265008	GCA_002048605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/605/GCA_002048605.1_ASM204860v1	-	04-0297
Staphylococcus aureus UCIM6019	1409409	PRJNA223729	223729	Terrabacteria group	Firmicutes	2.9317	32.8	-	JBMM01	8	3101	2942	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381470	GCA_000537595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/595/GCA_000537595.1_Stap_aure_UCIM6019_V1	-	UCIM6019
Staphylococcus aureus UCIM6015	1409407	PRJNA223727	223727	Terrabacteria group	Firmicutes	2.99284	32.7	-	JBMO01	40	3161	2980	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381468	GCA_000537615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/615/GCA_000537615.1_Stap_aure_UCIM6015_V1	-	UCIM6015
Salmonella enterica subsp. enterica serovar Kiambu	682797	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.48323	52.2	-	MZEV01	48	4519	4281	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265032	GCA_002048645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/645/GCA_002048645.1_ASM204864v1	-	96-0338
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.23042	50.8	-	LVTH01	374	5756	5138	4/18/16	2/25/17	Contig	JCVI	SAMN04393304	GCA_001622045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/045/GCA_001622045.1_ASM162204v1	-	GN06130
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36919	65.6	-	COOI01	104	4289	4081	3/22/15	3/12/17	Scaffold	SC	SAMEA1404044	GCA_001386035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/035/GCA_001386035.1_7314_8_78	-	0928K
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.12057	39.6	-	CPNT01	86	2343	2070	3/23/15	3/11/17	Scaffold	SC	SAMEA1020704	GCA_001140005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/005/GCA_001140005.1_6187_5_8	-	LMG375
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.03596	39.7	-	CMJW01	71	2228	2028	3/22/15	3/11/17	Scaffold	SC	SAMEA1026156	GCA_001140085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/085/GCA_001140085.1_7038_8_39	-	SMRU2247
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36615	65.6	-	COSW01	114	4287	4075	3/23/15	3/12/17	Scaffold	SC	SAMEA1404045	GCA_001386055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/055/GCA_001386055.1_7755_5_55	-	type strain: 0821
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.59595	50.5	-	LVTI01	420	6102	5438	4/18/16	2/25/17	Contig	JCVI	SAMN04393305	GCA_001622055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/055/GCA_001622055.1_ASM162205v1	-	GN06136
Salmonella enterica subsp. enterica serovar Minnesota	70803	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.58589	52.2	-	MZEX01	38	4614	4379	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264929	GCA_002048655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/655/GCA_002048655.1_ASM204865v1	-	94-0661
Staphylococcus aureus MISS6007	1409405	PRJNA223725	223725	Terrabacteria group	Firmicutes	2.89882	32.7	-	JBMQ01	14	3058	2892	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381466	GCA_000537635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/635/GCA_000537635.1_Stap_aure_MISS6007_V1	-	MISS6007
Staphylococcus aureus HOAG6059	1409404	PRJNA223724	223724	Terrabacteria group	Firmicutes	2.89766	32.7	-	JBMR01	14	3053	2896	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381465	GCA_000537655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/655/GCA_000537655.1_Stap_aure_HOAG6059_V1	-	HOAG6059
Salmonella enterica subsp. enterica serovar Uganda	487004	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.6946	52.2	-	MZEU01	49	4757	4523	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264957	GCA_002048685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/685/GCA_002048685.1_ASM204868v1	-	97-0352
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.00381	50.8	-	LVTJ01	191	5231	4840	4/18/16	2/25/17	Contig	JCVI	SAMN04393306	GCA_001622075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/075/GCA_001622075.1_ASM162207v1	-	GN06156
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3606	65.6	-	COPY01	123	4288	4059	3/23/15	3/12/17	Scaffold	SC	SAMEA1404046	GCA_001386075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/075/GCA_001386075.1_7755_3_51	-	0330K
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09029	39.5	-	CMSR01	48	2284	2055	3/23/15	3/11/17	Scaffold	SC	SAMEA2062394	GCA_001140125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/125/GCA_001140125.1_9803_8_74	-	19A
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.21963	39.6	-	CMCT01	50	2441	2212	3/21/15	3/10/17	Scaffold	SC	SAMEA1029453	GCA_001140145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/145/GCA_001140145.1_7004_8_96	-	SMRU2928
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36677	65.6	-	COYU01	107	4283	4079	3/23/15	3/12/17	Scaffold	SC	SAMEA1404047	GCA_001386095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/095/GCA_001386095.1_7841_7_68	-	2008J
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.19275	50.6	-	LVTK01	242	5609	5085	4/18/16	2/25/17	Contig	JCVI	SAMN04393307	GCA_001622105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/105/GCA_001622105.1_ASM162210v1	-	GN06168
Salmonella enterica subsp. enterica serovar Blockley	57741	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.86961	52	-	MZFC01	45	4978	4734	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264985	GCA_002048695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/695/GCA_002048695.1_ASM204869v1	-	05-0359
Staphylococcus aureus SMMC6051	1409399	PRJNA223719	223719	Terrabacteria group	Firmicutes	2.89284	32.9	-	JBMW01	12	3030	2867	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381460	GCA_000537675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/675/GCA_000537675.1_Stap_aure_SMMC6051_V1	-	SMMC6051
Staphylococcus aureus SCOA6012	1409398	PRJNA223718	223718	Terrabacteria group	Firmicutes	2.92732	32.7	-	JBMX01	27	3114	2952	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381459	GCA_000537695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/695/GCA_000537695.1_Stap_aure_SCOA6012_V1	-	SCOA6012
Salmonella enterica subsp. enterica serovar Pomona	570935	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.41278	52.3	-	MZFF01	37	4451	4211	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264949	GCA_002048725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/725/GCA_002048725.1_ASM204872v1	-	05-0020
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.27844	50.7	-	LVTL01	425	5765	5119	4/18/16	2/25/17	Contig	JCVI	SAMN04393308	GCA_001622115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/115/GCA_001622115.1_ASM162211v1	-	GN06180
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36756	65.6	-	COSZ01	104	4291	4093	3/23/15	3/12/17	Scaffold	SC	SAMEA1404048	GCA_001386115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/115/GCA_001386115.1_7755_5_56	-	0822V
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.15428	39.6	-	CKXW01	80	2417	2153	3/21/15	3/11/17	Scaffold	SC	SAMEA1026186	GCA_001140185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/185/GCA_001140185.1_6823_7_13	-	SMRU2005
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.27243	40.1	-	CLNG01	160	2376	2083	3/21/15	3/14/17	Scaffold	SC	SAMEA1028711	GCA_001140205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/205/GCA_001140205.1_6938_8_19	-	SMRU2731
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36341	65.6	-	CPAA01	102	4287	4082	3/23/15	3/12/17	Scaffold	SC	SAMEA1469485	GCA_001386135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/135/GCA_001386135.1_7935_3_57	-	2090Y
Escherichia coli	562	PRJNA290784	290784	Proteobacteria	Gammaproteobacteria	5.13362	50.5	-	LVTM01	493	5591	4863	4/18/16	2/25/17	Contig	JCVI	SAMN04393309	GCA_001622135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/622/135/GCA_001622135.1_ASM162213v1	-	GN06186
Salmonella enterica subsp. enterica serovar Ohio	117541	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69665	52.2	-	MZFE01	63	4738	4490	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264941	GCA_002048745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/745/GCA_002048745.1_ASM204874v1	-	05-0106
Staphylococcus aureus LAMC0037	1409394	PRJNA223714	223714	Terrabacteria group	Firmicutes	2.90451	32.7	-	JBNB01	12	3059	2897	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381455	GCA_000537715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/715/GCA_000537715.1_Stap_aure_LAMC0037_V1	-	LAMC0037
Staphylococcus aureus MISS6020	1409387	PRJNA223707	223707	Terrabacteria group	Firmicutes	2.84234	32.8	-	JBNI01	27	2970	2800	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381448	GCA_000537735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/735/GCA_000537735.1_Stap_aure_MISS6020_V1	-	MISS6020
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.4481	52.3	-	MZFH01	40	4502	4256	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03359812	GCA_002048755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/755/GCA_002048755.1_ASM204875v1	-	BCW_5989
Escherichia coli	562	PRJNA274344	274344	Proteobacteria	Gammaproteobacteria	4.9499	50.8	-	LCVG01	93	5141	4867	5/5/16	2/25/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02949646	GCA_001637625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/625/GCA_001637625.1_ASM163762v1	-	2772a
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37687	65.6	-	COZS01	79	4291	4094	3/23/15	3/12/17	Scaffold	SC	SAMEA1469486	GCA_001386155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/155/GCA_001386155.1_7935_3_51	-	2083Q
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.14968	39.7	-	CMWX01	95	2313	1993	3/22/15	3/11/17	Scaffold	SC	SAMEA1022912	GCA_001140265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/265/GCA_001140265.1_6406_5_1	-	404
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.02683	39.7	-	CPRA01	54	2197	2007	3/23/15	3/11/17	Scaffold	SC	SAMEA770016	GCA_001140285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/285/GCA_001140285.1_5242_2_5	-	9N/2
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.367	65.6	-	COZX01	102	4302	4085	3/22/15	3/12/17	Scaffold	SC	SAMEA1469488	GCA_001386175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/175/GCA_001386175.1_7935_3_55	-	2088W
Escherichia coli	562	PRJNA274727	274727	Proteobacteria	Gammaproteobacteria	5.48298	50.5	-	LCVH01	290	5830	5393	5/5/16	2/25/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02949647	GCA_001637635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/635/GCA_001637635.1_ASM163763v1	-	3234/A
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.75533	52.1	-	MZFI01	60	4811	4581	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03359811	GCA_002048795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/795/GCA_002048795.1_ASM204879v1	-	BCW_5988
Staphylococcus aureus SJUD6056	1409386	PRJNA223706	223706	Terrabacteria group	Firmicutes	2.94302	32.7	-	JBNJ01	10	3120	2962	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381447	GCA_000537755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/755/GCA_000537755.1_Stap_aure_SJUD6056_V1	-	SJUD6056
Staphylococcus aureus SJUD6064	1409384	PRJNA223704	223704	Terrabacteria group	Firmicutes	2.8877	32.7	-	JBNL01	7	3042	2875	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381445	GCA_000537775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/775/GCA_000537775.1_Stap_aure_SJUD6064_V1	-	SJUD6064
Salmonella enterica subsp. enterica serovar Ohio	117541	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.68996	52.2	-	MZFJ01	69	4734	4484	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264940	GCA_002048805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/805/GCA_002048805.1_ASM204880v1	-	01-0557
Escherichia coli	562	PRJNA274024	274024	Proteobacteria	Gammaproteobacteria	5.45939	50.4	-	JXUH01	270	5783	5354	5/5/16	2/25/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02949645	GCA_001637645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/645/GCA_001637645.1_ASM163764v1	-	131/07
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36771	65.6	-	COZU01	97	4292	4087	3/23/15	3/12/17	Scaffold	SC	SAMEA1469489	GCA_001386195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/195/GCA_001386195.1_7935_3_54	-	2087V
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.09084	39.6	-	CLSY01	71	2307	2090	3/21/15	3/4/17	Scaffold	SC	SAMEA1029033	GCA_001140425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/425/GCA_001140425.1_6972_4_6	-	SMRU2598
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.13802	39.4	-	CLOB01	62	2352	2119	3/21/15	3/4/17	Scaffold	SC	SAMEA1029075	GCA_001140545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/545/GCA_001140545.1_6949_1_22	-	SMRU2422
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36452	65.6	-	COZR01	101	4285	4072	3/22/15	3/12/17	Scaffold	SC	SAMEA1469490	GCA_001386215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/215/GCA_001386215.1_7935_3_50	-	2082P
Escherichia coli	562	PRJNA276627	276627	Proteobacteria	Gammaproteobacteria	4.80693	50.6	-	JYPB01	123	5048	4709	5/5/16	2/25/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02949652	GCA_001637655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/655/GCA_001637655.1_ASM163765v1	-	RiKo 2305/09
Salmonella enterica subsp. enterica serovar Reading	165302	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.54219	52.1	-	MZFK01	90	4592	4342	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264952	GCA_002048825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/825/GCA_002048825.1_ASM204882v1	-	01-0409
Staphylococcus aureus SMMC6007	1409377	PRJNA223697	223697	Terrabacteria group	Firmicutes	2.89799	32.7	-	JBNS01	10	3056	2896	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381438	GCA_000537795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/795/GCA_000537795.1_Stap_aure_SMMC6007_V1	-	SMMC6007
Staphylococcus aureus COAS6025	1409375	PRJNA223695	223695	Terrabacteria group	Firmicutes	2.89856	32.7	-	JBNU01	9	3056	2898	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381436	GCA_000537815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/815/GCA_000537815.1_Stap_aure_COAS6025_V1	-	COAS6025
Salmonella enterica subsp. enterica serovar Reading	165302	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83247	52.2	-	MZFM01	79	4958	4716	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264951	GCA_002048855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/855/GCA_002048855.1_ASM204885v1	-	97-0463
Escherichia coli	562	PRJNA275821	275821	Proteobacteria	Gammaproteobacteria	4.95475	50.8	-	JYKB01	129	5175	4855	5/5/16	2/25/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02949651	GCA_001637705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/705/GCA_001637705.1_ASM163770v1	-	RiKo 2299/09
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38973	65.6	-	COZV01	95	4297	4095	3/22/15	3/12/17	Scaffold	SC	SAMEA1469491	GCA_001386235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/235/GCA_001386235.1_7935_3_53	-	2085S
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.98687	39.8	-	CQRB01	44	2201	1977	3/22/15	3/4/17	Scaffold	SC	SAMEA970267	GCA_001140645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/645/GCA_001140645.1_5159_7_2	-	BHN628
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.17193	39.8	-	CMWM01	288	2248	1981	3/23/15	3/4/17	Scaffold	SC	SAMEA1022877	GCA_001140665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/665/GCA_001140665.1_5919_1_3	-	106
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36504	65.6	-	COZT01	106	4295	4086	3/23/15	3/12/17	Scaffold	SC	SAMEA1469492	GCA_001386255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/255/GCA_001386255.1_7935_3_52	-	2084R
Escherichia coli	562	PRJNA277619	277619	Proteobacteria	Gammaproteobacteria	5.11287	50.7	-	LCVI01	186	5330	4933	5/5/16	2/25/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02949653	GCA_001637715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/715/GCA_001637715.1_ASM163771v1	-	RiKo 2308/09
Salmonella enterica subsp. enterica serovar Adelaide	29473	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69091	52.2	-	MZFL01	37	4724	4497	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264861	GCA_002048865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/865/GCA_002048865.1_ASM204886v1	-	01-0361
Staphylococcus aureus AMMC6050	1409369	PRJNA223689	223689	Terrabacteria group	Firmicutes	2.84427	32.8	-	JBOA01	22	2931	2780	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381430	GCA_000537835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/835/GCA_000537835.1_Stap_aure_AMMC6050_V1	-	AMMC6050
Staphylococcus aureus SJOS6061	1409366	PRJNA223686	223686	Terrabacteria group	Firmicutes	2.9405	32.7	-	JBOD01	11	3119	2955	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381427	GCA_000537855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/855/GCA_000537855.1_Stap_aure_SJOS6061_V1	-	SJOS6061
Salmonella enterica subsp. enterica serovar Ohio	117541	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.82711	52.2	-	MZFP01	73	4905	4638	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264939	GCA_002048905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/905/GCA_002048905.1_ASM204890v1	-	2011K-0797
Escherichia coli	562	PRJNA279119	279119	Proteobacteria	Gammaproteobacteria	5.02485	50.6	-	LAGW01	204	5209	4824	5/5/16	2/25/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02949655	GCA_001637735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/735/GCA_001637735.1_ASM163773v1	-	RiKo 2340/09
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36485	65.6	-	CPAC01	116	4299	4084	3/23/15	3/12/17	Scaffold	SC	SAMEA1469494	GCA_001386295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/295/GCA_001386295.1_7935_3_61	-	2097F
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.2338	39.5	-	CMKY01	55	2430	2194	3/22/15	3/4/17	Scaffold	SC	SAMEA1029198	GCA_001140745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/745/GCA_001140745.1_7054_5_22	-	SMRU3070
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.06541	39.6	-	CKYK01	64	2248	2004	3/21/15	3/4/17	Scaffold	SC	SAMEA1025304	GCA_001140785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/785/GCA_001140785.1_6830_3_2	-	SMRU1634
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35583	65.4	-	CPAE01	169	4336	3943	3/22/15	3/12/17	Scaffold	SC	SAMEA1469495	GCA_001386315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/315/GCA_001386315.1_7935_3_62	-	2111W
Escherichia coli	562	PRJNA277923	277923	Proteobacteria	Gammaproteobacteria	4.76549	50.8	-	LCVJ01	59	4830	4595	5/5/16	2/25/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02949654	GCA_001637745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/745/GCA_001637745.1_ASM163774v1	-	RiKo 2331/09
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.6757	52.1	-	MZFQ01	32	4748	4516	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03359803	GCA_002048925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/925/GCA_002048925.1_ASM204892v1	-	BCW_5980
Staphylococcus aureus GGMC6008	1409364	PRJNA223684	223684	Terrabacteria group	Firmicutes	2.94008	32.8	-	JBOF01	13	3121	2951	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381425	GCA_000537875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/875/GCA_000537875.1_Stap_aure_GGMC6008_V1	-	GGMC6008
Staphylococcus aureus SJOS6051	1409361	PRJNA223681	223681	Terrabacteria group	Firmicutes	2.90251	32.7	-	JBOI01	13	3057	2895	2/4/14	3/2/17	Contig	Broad Institute	SAMN02381422	GCA_000537895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/537/895/GCA_000537895.1_Stap_aure_SJOS6051_V1	-	SJOS6051
Salmonella enterica subsp. enterica serovar Ohio	117541	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.85058	52.1	-	MZFT01	26	4909	4674	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264938	GCA_002048935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/935/GCA_002048935.1_ASM204893v1	-	07-0148
Escherichia coli	562	PRJNA280153	280153	Proteobacteria	Gammaproteobacteria	5.29719	50.6	-	LAUC01	252	5705	5231	5/5/16	2/25/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02949656	GCA_001637785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/785/GCA_001637785.1_ASM163778v1	-	RiKo 2351/09
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35487	65.6	-	CPAR01	119	4305	4080	3/23/15	3/12/17	Scaffold	SC	SAMEA1469497	GCA_001386335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/335/GCA_001386335.1_7935_3_96	-	0358Q
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.0928	39.5	-	CKYQ01	47	2284	2047	3/21/15	3/4/17	Scaffold	SC	SAMEA1025636	GCA_001140865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/865/GCA_001140865.1_6830_3_20	-	SMRU1652
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.15449	39.5	-	CMKC01	74	2390	2152	3/23/15	3/4/17	Scaffold	SC	SAMEA1029205	GCA_001140885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/885/GCA_001140885.1_7054_4_14	-	SMRU3038
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36172	65.6	-	COZY01	106	4294	4092	3/23/15	3/12/17	Scaffold	SC	SAMEA1469499	GCA_001386375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/375/GCA_001386375.1_7935_3_58	-	2091Z
Escherichia coli	562	PRJNA280154	280154	Proteobacteria	Gammaproteobacteria	4.92617	50.7	-	LAUD01	149	5187	4853	5/5/16	2/25/17	Contig	"Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory"	SAMN02949650	GCA_001637795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/795/GCA_001637795.1_ASM163779v1	-	UVM2
Salmonella enterica subsp. enterica serovar Adelaide	29473	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.49306	52.4	-	MZFR01	51	4547	4320	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264860	GCA_002048945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/945/GCA_002048945.1_ASM204894v1	-	2009K1429
Staphylococcus aureus HST-105	1324330	PRJNA219432	219432	Terrabacteria group	Firmicutes	2.80058	32.7	-	AZTH01	35	2951	2786	2/6/14	3/3/17	Contig	Lebanese American University	SAMN02952966	GCA_000564895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/895/GCA_000564895.1_WGS_Staphylococcus_aureus_HST-105	-	HST-105
Staphylococcus aureus HST-107	1324329	PRJNA219433	219433	Terrabacteria group	Firmicutes	2.80355	32.7	-	AZTI01	31	2917	2752	2/6/14	3/3/17	Contig	Lebanese American University	SAMN02952967	GCA_000564915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/915/GCA_000564915.1_WGS_Staphylococcus_aureus_HST-107	-	HST-107
Salmonella enterica subsp. enterica serovar Gaminara	913070	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.56185	52.3	-	MZFZ01	49	4655	4403	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264896	GCA_002049005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/005/GCA_002049005.1_ASM204900v1	-	80-2469
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.23833	50.7	-	LSFO01	175	5517	5173	5/5/16	2/25/17	Contig	Swansea University	SAMN04273132	GCA_001637825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/825/GCA_001637825.1_ASM163782v1	-	WCE266
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35648	65.6	-	COZW01	101	4285	4089	3/23/15	3/12/17	Scaffold	SC	SAMEA1469500	GCA_001386395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/395/GCA_001386395.1_7935_3_59	-	2092A
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.09433	39.6	-	CLPB01	76	2277	2038	3/21/15	3/4/17	Scaffold	SC	SAMEA1029022	GCA_001140905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/905/GCA_001140905.1_6949_2_3	-	SMRU2427
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.17953	39.5	-	CPLE01	71	2401	2183	3/23/15	3/4/17	Scaffold	SC	SAMEA682591	GCA_001140925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/925/GCA_001140925.1_5392_6_5	-	spnIC174
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34151	65.6	-	CPAM01	97	4251	4062	3/23/15	3/12/17	Scaffold	SC	SAMEA1469501	GCA_001386415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/415/GCA_001386415.1_7935_3_92	-	0109V
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.34758	50.6	-	LSEL01	206	5655	5267	5/5/16	2/25/17	Contig	Swansea University	SAMN04273118	GCA_001637845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/845/GCA_001637845.1_ASM163784v1	-	MB1074
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.77605	52.1	-	MZGA01	58	4843	4580	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264919	GCA_002049015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/015/GCA_002049015.1_ASM204901v1	-	58-5818
Staphylococcus aureus JS046	1324331	PRJNA219436	219436	Terrabacteria group	Firmicutes	2.82581	32.7	-	AZTG01	30	2940	2772	2/6/14	3/3/17	Contig	Lebanese American University	SAMN02952965	GCA_000564935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/935/GCA_000564935.1_WGS_Staphylococcus_aureus_JS046	-	JS046
Staphylococcus aureus HST-084	1324326	PRJNA215676	215676	Terrabacteria group	Firmicutes	2.71529	32.7	-	AZTF01	36	2822	2644	2/6/14	3/3/17	Contig	Lebanese American University	SAMN02952964	GCA_000564955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/955/GCA_000564955.1_WGS_Staphylococcus_aureus_HST-084	-	HST-084
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.68824	52.2	-	MZFY01	37	4771	4512	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264993	GCA_002049045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/045/GCA_002049045.1_ASM204904v1	-	91-0332
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.06035	50.8	-	LSEI01	131	5280	4944	5/5/16	2/25/17	Contig	Swansea University	SAMN04273115	GCA_001637865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/865/GCA_001637865.1_ASM163786v1	-	KO178B
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.365	65.6	-	CPAN01	106	4296	4083	3/23/15	3/12/17	Scaffold	SC	SAMEA1469502	GCA_001386435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/435/GCA_001386435.1_7935_3_91	-	0031K
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.07711	40.2	-	CPLH01	263	2304	2029	3/23/15	3/4/17	Scaffold	SC	SAMEA682453	GCA_001140945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/945/GCA_001140945.1_5366_5_6	-	08B05958
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.13001	39.7	-	CMVG01	96	2283	2040	3/22/15	3/10/17	Scaffold	SC	SAMEA1991273	GCA_001141025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/025/GCA_001141025.1_5756_5_2	-	264
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3564	65.6	-	CPAF01	107	4281	4065	3/23/15	3/12/17	Scaffold	SC	SAMEA1469506	GCA_001386515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/515/GCA_001386515.1_7935_3_65	-	2127N
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.22341	50.8	-	LSEK01	136	5495	5148	5/5/16	2/25/17	Contig	Swansea University	SAMN04273117	GCA_001637885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/885/GCA_001637885.1_ASM163788v1	-	M8
Salmonella enterica subsp. enterica serovar Virchow	48409	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.49123	52.2	-	MZGB01	54	4553	4334	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264965	GCA_002049055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/055/GCA_002049055.1_ASM204905v1	-	66-4890
Staphylococcus aureus subsp. aureus S2396	1288909	PRJEB1381	237503	Terrabacteria group	Firmicutes	2.94726	32.7	-	CAWA01	96	3089	2949	2/5/14	3/3/17	Contig	UMCU	SAMEA3138928	GCA_000577355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/355/GCA_000577355.1_S2396D1	-	S2396
Staphylococcus aureus subsp. aureus S2397	1288966	PRJEB1382	237507	Terrabacteria group	Firmicutes	2.77226	32.7	-	CAVV01	75	2876	2726	2/5/14	3/3/17	Contig	UMCU	SAMEA3138932	GCA_000577595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/595/GCA_000577595.1_S2397D1	-	S2397
Salmonella enterica subsp. enterica serovar Miami	286780	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.58143	52	-	MZGC01	71	4681	4407	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265055	GCA_002049065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/065/GCA_002049065.1_ASM204906v1	-	86-0269
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	4.85216	50.6	-	LSEG01	118	4941	4612	5/5/16	2/25/17	Contig	Swansea University	SAMN04273113	GCA_001637895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/895/GCA_001637895.1_ASM163789v1	-	J09
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36345	65.6	-	CPAG01	96	4303	4084	3/23/15	3/12/17	Scaffold	SC	SAMEA1469510	GCA_001386555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/555/GCA_001386555.1_7935_3_67	-	2129Q
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.06529	39.7	-	CKAE01	55	2233	2021	3/21/15	3/10/17	Scaffold	SC	SAMEA974672	GCA_001141145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/145/GCA_001141145.1_6259_6_13	-	33C
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.14653	39.7	-	CLFG01	61	2345	2109	3/21/15	3/10/17	Scaffold	SC	SAMEA1025737	GCA_001141245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/245/GCA_001141245.1_6899_7_23	-	SMRU2111
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36251	65.6	-	CPAH01	103	4301	4088	3/23/15	3/12/17	Scaffold	SC	SAMEA1469514	GCA_001386575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/575/GCA_001386575.1_7935_3_70	-	2135X
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.18403	50.8	-	LSEN01	152	5436	5107	5/5/16	2/25/17	Contig	Swansea University	SAMN04273120	GCA_001637905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/905/GCA_001637905.1_ASM163790v1	-	MB17684
Salmonella enterica subsp. enterica serovar Inverness	913074	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.99835	52.1	-	MZEW01	43	5160	4857	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264909	GCA_002049115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/115/GCA_002049115.1_ASM204911v1	-	96-0327
Staphylococcus aureus subsp. aureus S0462	1288969	PRJEB1385	237504	Terrabacteria group	Firmicutes	2.7604	32.8	-	CAVX01	134	2892	2651	2/5/14	3/3/17	Contig	UMCU	SAMEA3138935	GCA_000577675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/675/GCA_000577675.1_S0462D1	-	S0462
Staphylococcus aureus subsp. aureus S2398	1288967	PRJEB1383	237505	Terrabacteria group	Firmicutes	2.74925	32.6	-	CAVW01	78	2878	2737	2/5/14	3/3/17	Contig	UMCU	SAMEA3138943	GCA_000577925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/577/925/GCA_000577925.1_S2398D1	-	S2398
Salmonella enterica subsp. enterica serovar Gaminara	913070	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.54146	52.3	-	MZGF01	48	4603	4362	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264894	GCA_002049145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/145/GCA_002049145.1_ASM204914v1	-	05-0781
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.10953	50.7	-	LSEM01	181	5353	5021	5/5/16	2/25/17	Contig	Swansea University	SAMN04273119	GCA_001637945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/945/GCA_001637945.1_ASM163794v1	-	MB14972
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36212	65.6	-	CRXY01	94	4293	4081	3/23/15	3/12/17	Scaffold	SC	SAMEA1469515	GCA_001386595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/595/GCA_001386595.1_7935_3_69	-	2134W
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10114	39.5	-	CKQH01	51	2311	2091	3/21/15	3/10/17	Scaffold	SC	SAMEA1025020	GCA_001141265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/265/GCA_001141265.1_6680_6_3	-	SMRU939
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.13469	39.6	-	CMLA01	63	2364	2139	3/23/15	3/10/17	Scaffold	SC	SAMEA1029249	GCA_001141325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/325/GCA_001141325.1_7054_5_5	-	SMRU3053
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35476	65.6	-	CPAJ01	87	4266	4080	3/23/15	3/12/17	Scaffold	SC	SAMEA1469524	GCA_001386615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/615/GCA_001386615.1_7935_3_75	-	2146J
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.10119	50.7	-	LSEQ01	73	5293	4993	5/5/16	2/25/17	Contig	Swansea University	SAMN04273123	GCA_001637965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/965/GCA_001637965.1_ASM163796v1	-	U12
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.37	51.8	-	MZEY01	1671	5656	4932	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03359821	GCA_002049155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/155/GCA_002049155.1_ASM204915v1	-	BCW_6000
Staphylococcus aureus S0924	1407497	PRJEB4745	235289	Terrabacteria group	Firmicutes	2.78099	32.7	-	CBWV01	491	2877	2747	1/15/14	3/3/17	Contig	UMCU	SAMEA3138946	GCA_000582725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/725/GCA_000582725.1_S0924	-	S0924
Staphylococcus aureus subsp. aureus S2395	1288908	PRJEB1380	237502	Terrabacteria group	Firmicutes	2.89759	32.7	-	CAVU01	120	3054	2917	2/5/14	3/3/17	Contig	UMCU	SAMEA3138947	GCA_000582745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/745/GCA_000582745.1_S2395D1	-	S2395
Salmonella enterica subsp. enterica serovar Manhattan	340189	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.64302	52.2	-	MZFA01	60	4702	4463	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265075	GCA_002049165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/165/GCA_002049165.1_ASM204916v1	-	81-0058
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.16392	50.8	-	LSEH01	165	5395	5080	5/5/16	2/25/17	Contig	Swansea University	SAMN04273114	GCA_001637985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/985/GCA_001637985.1_ASM163798v1	-	J21
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36085	65.6	-	CPAK01	110	4297	4079	3/22/15	3/12/17	Scaffold	SC	SAMEA1469526	GCA_001386635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/635/GCA_001386635.1_7935_3_76	-	2150N
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.16323	39.6	-	CLRM01	59	2422	2190	3/21/15	3/10/17	Scaffold	SC	SAMEA1028808	GCA_001141345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/345/GCA_001141345.1_6972_2_8	-	SMRU2552
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.04352	39.8	-	CPQE01	239	2207	2001	3/22/15	3/10/17	Scaffold	SC	SAMEA1020025	GCA_001141385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/385/GCA_001141385.1_5901_6_9	-	7535-06
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36836	65.6	-	CPAI01	102	4298	4090	3/23/15	3/12/17	Scaffold	SC	SAMEA1469529	GCA_001386655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/655/GCA_001386655.1_7935_3_73	-	2142E
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.0568	50.8	-	LSEJ01	107	5255	4946	5/5/16	2/25/17	Contig	Swansea University	SAMN04273116	GCA_001638005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/005/GCA_001638005.1_ASM163800v1	-	KO198B
Salmonella enterica subsp. enterica serovar Blockley	57741	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72945	52.1	-	MZEZ01	45	4777	4563	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264986	GCA_002049195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/195/GCA_002049195.1_ASM204919v1	-	79-1229
Staphylococcus aureus subsp. aureus S1805	1288907	PRJEB1379	202417	Terrabacteria group	Firmicutes	2.75587	32.7	-	CAVY01	125	2810	2702	2/5/14	3/3/17	Contig	UMCU	SAMEA3138950	GCA_000582805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/805/GCA_000582805.1_S1805D1	-	S1805
Staphylococcus aureus	1280	PRJNA239406	239406	Terrabacteria group	Firmicutes	2.80798	32.7	-	JFFV01	41	2960	2751	3/12/14	3/3/17	Contig	The Chinese University of Hong Kong	SAMN02665331	GCA_000590395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/590/395/GCA_000590395.1_1st_version_of_the_MRSA_CUHK_HK188	24744328	CUHK_HK188
Salmonella enterica subsp. enterica serovar Pomona	570935	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72842	52.2	-	MZFB01	50	4879	4602	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264950	GCA_002049225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/225/GCA_002049225.1_ASM204922v1	-	81-2645
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.14214	50.7	-	LSEO01	140	5314	5017	5/5/16	2/25/17	Contig	Swansea University	SAMN04273121	GCA_001638025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/025/GCA_001638025.1_ASM163802v1	-	MB3298
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36242	65.6	-	CPAL01	105	4292	4087	3/23/15	3/12/17	Scaffold	SC	SAMEA1469532	GCA_001386675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/675/GCA_001386675.1_7935_3_78	-	2154S
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.05946	39.6	-	CKGB01	131	2242	1981	3/21/15	3/10/17	Scaffold	SC	SAMEA1024112	GCA_001141405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/405/GCA_001141405.1_6630_4_23	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11098	39.5	-	CLHR01	71	2353	2110	3/21/15	3/10/17	Scaffold	SC	SAMEA1026184	GCA_001141545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/545/GCA_001141545.1_6925_5_21	-	SMRU2181
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35464	65.6	-	CPIC01	90	4280	4057	3/23/15	3/12/17	Scaffold	SC	SAMEA1707113	GCA_001386695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/695/GCA_001386695.1_8987_4_89	-	0056M
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.18534	50.7	-	LSES01	137	5461	5104	5/5/16	2/25/17	Contig	Swansea University	SAMN04273125	GCA_001638045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/045/GCA_001638045.1_ASM163804v1	-	U44
Salmonella enterica subsp. enterica serovar Pomona	570935	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.45134	52.3	-	MZFO01	42	4508	4265	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264948	GCA_002049235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/235/GCA_002049235.1_ASM204923v1	-	2012K-0680
Staphylococcus aureus M1316	1402798	PRJNA220148	220148	Terrabacteria group	Firmicutes	2.85873	32.9	-	JEFC01	15	3001	2832	2/19/14	3/3/17	Contig	Broad Institute	SAMN02360955	GCA_000592785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/785/GCA_000592785.1_Stap_aure_M1316_V1	-	M1316
Staphylococcus aureus M1306	1402791	PRJNA220141	220141	Terrabacteria group	Firmicutes	2.86036	32.8	-	JEFD01	14	3004	2841	2/19/14	3/3/17	Contig	Broad Institute	SAMN02360948	GCA_000592805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/805/GCA_000592805.1_Stap_aure_M1306_V1	-	M1306
Salmonella enterica subsp. enterica serovar Manhattan	340189	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.13837	52	-	MZFN01	537	5172	4872	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03265050	GCA_002049245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/245/GCA_002049245.1_ASM204924v1	-	95-0251
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.279	50.7	-	LSET01	193	5506	5153	5/5/16	2/25/17	Contig	Swansea University	SAMN04273126	GCA_001638055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/055/GCA_001638055.1_ASM163805v1	-	U5
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35418	65.6	-	CPDJ01	84	4272	4056	3/23/15	3/12/17	Scaffold	SC	SAMEA1707114	GCA_001386715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/715/GCA_001386715.1_8898_8_91	-	2215J
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10497	39.4	-	CLHF01	54	2326	2088	3/21/15	3/10/17	Scaffold	SC	SAMEA1025867	GCA_001141565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/565/GCA_001141565.1_6925_5_12	-	SMRU2172
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.112	39.7	-	CKSE01	67	2328	2082	3/21/15	3/10/17	Scaffold	SC	SAMEA1025136	GCA_001141585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/585/GCA_001141585.1_6710_6_12	-	SMRU1356
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35723	65.6	-	CPAU01	75	4280	4061	3/23/15	3/12/17	Scaffold	SC	SAMEA1707116	GCA_001386735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/735/GCA_001386735.1_8898_8_22	-	2281F
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.20972	50.7	-	LSER01	141	5482	5135	5/5/16	2/25/17	Contig	Swansea University	SAMN04273124	GCA_001638065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/065/GCA_001638065.1_ASM163806v1	-	U2
Salmonella enterica subsp. enterica serovar Adelaide	29473	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.49547	52.4	-	MZFD01	50	4541	4308	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264862	GCA_002049305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/305/GCA_002049305.1_ASM204930v1	-	05-0215
Staphylococcus aureus M1281	1402769	PRJNA220119	220119	Terrabacteria group	Firmicutes	2.90504	32.9	-	JEFE01	35	3063	2896	2/19/14	3/3/17	Contig	Broad Institute	SAMN02360926	GCA_000592825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/825/GCA_000592825.1_Stap_aure_M1281_V1	-	M1281
Staphylococcus aureus M1265	1402756	PRJNA220106	220106	Terrabacteria group	Firmicutes	2.85171	32.8	-	JEFF01	33	2999	2842	2/19/14	3/3/17	Contig	Broad Institute	SAMN02360913	GCA_000592845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/845/GCA_000592845.1_Stap_aure_M1265_V1	-	M1265
Salmonella enterica subsp. enterica serovar Pomona	570935	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.45106	52.3	-	MZFS01	62	4504	4262	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264947	GCA_002049325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/325/GCA_002049325.1_ASM204932v1	-	07-1099
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	4.94312	50.7	-	LSEU01	179	5128	4793	5/5/16	2/25/17	Contig	Swansea University	SAMN04273127	GCA_001638075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/075/GCA_001638075.1_ASM163807v1	-	U80
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35813	65.6	-	CPHS01	92	4286	4059	3/23/15	3/12/17	Scaffold	SC	SAMEA1707118	GCA_001386755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/755/GCA_001386755.1_8987_4_77	-	0562M
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09275	39.5	-	CKMH01	85	2335	2102	3/21/15	3/10/17	Scaffold	SC	SAMEA1023991	GCA_001141685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/685/GCA_001141685.1_6649_8_13	-	10B
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.19618	39.5	-	CKKY01	43	2433	2196	3/21/15	3/14/17	Scaffold	SC	SAMEA1024146	GCA_001141725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/725/GCA_001141725.1_6631_7_4	-	23F
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.33968	65.6	-	CPDF01	59	4260	4075	3/23/15	3/12/17	Scaffold	SC	SAMEA1707121	GCA_001386775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/775/GCA_001386775.1_8898_8_90	-	2187D
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.04185	50.8	-	LSEP01	135	5230	4920	5/5/16	2/25/17	Contig	Swansea University	SAMN04273122	GCA_001638125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/125/GCA_001638125.1_ASM163812v1	-	MB3323
Salmonella enterica subsp. enterica serovar Adelaide	29473	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.56027	52.4	-	MZFU01	29	4637	4393	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264859	GCA_002049335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/335/GCA_002049335.1_ASM204933v1	-	06-0804
Staphylococcus aureus M1259	1402750	PRJNA220100	220100	Terrabacteria group	Firmicutes	2.87477	32.8	-	JEFG01	42	3022	2843	2/19/14	3/3/17	Contig	Broad Institute	SAMN02360907	GCA_000592865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/865/GCA_000592865.1_Stap_aure_M1259_V1	-	M1259
Staphylococcus aureus M1251	1402746	PRJNA220096	220096	Terrabacteria group	Firmicutes	2.87014	32.8	-	JEFH01	60	3023	2861	2/19/14	3/3/17	Contig	Broad Institute	SAMN02360903	GCA_000592885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/885/GCA_000592885.1_Stap_aure_M1251_V1	-	M1251
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.01667	52.1	-	MZFX01	111	5142	4839	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264970	GCA_002049345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/345/GCA_002049345.1_ASM204934v1	-	89-0307
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.38721	50.6	-	LSEW01	254	5526	5160	5/5/16	2/25/17	Contig	Swansea University	SAMN04273129	GCA_001638135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/135/GCA_001638135.1_ASM163813v1	-	WCE035
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36256	65.6	-	CPCG01	72	4270	4064	3/22/15	3/12/17	Scaffold	SC	SAMEA1707124	GCA_001386795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/795/GCA_001386795.1_8898_8_65	-	1614F
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.04675	39.9	-	CPNP01	73	2236	1988	3/23/15	3/10/17	Scaffold	SC	SAMEA682601	GCA_001141745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/745/GCA_001141745.1_5381_3_7	-	09B07478
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.0774	39.4	-	CRHN01	69	2289	2066	3/23/15	3/11/17	Scaffold	SC	SAMEA1025519	GCA_001141785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/785/GCA_001141785.1_6736_7_23	-	SMRU1295
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34894	65.6	-	CPDG01	63	4265	4064	3/22/15	3/12/17	Scaffold	SC	SAMEA1707125	GCA_001386815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/815/GCA_001386815.1_8898_8_89	-	2162B
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.23802	50.7	-	LSEZ01	188	5507	5163	5/5/16	2/25/17	Contig	Swansea University	SAMN04273133	GCA_001638155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/155/GCA_001638155.1_ASM163815v1	-	WCE296
Salmonella enterica subsp. enterica serovar Virchow	48409	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.68061	52.2	-	MZFW01	52	4715	4484	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264966	GCA_002049385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/385/GCA_002049385.1_ASM204938v1	-	82-1040
Staphylococcus aureus M1226	1402725	PRJNA220075	220075	Terrabacteria group	Firmicutes	2.84897	32.8	-	JEFI01	37	3002	2845	2/19/14	3/3/17	Contig	Broad Institute	SAMN02360882	GCA_000592905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/905/GCA_000592905.1_Stap_aure_M1226_V1	-	M1226
Staphylococcus aureus M1212	1402715	PRJNA220065	220065	Terrabacteria group	Firmicutes	2.84999	32.8	-	JEFJ01	29	3002	2849	2/19/14	3/3/17	Contig	Broad Institute	SAMN02360872	GCA_000592925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/925/GCA_000592925.1_Stap_aure_M1212_V1	-	M1212
Salmonella enterica subsp. enterica serovar Gaminara	913070	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.09395	52.1	-	MZGD01	92	5297	4987	3/20/17	3/22/17	Contig	University of California at Davis	SAMN03264895	GCA_002049445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/445/GCA_002049445.1_ASM204944v1	-	66-5257
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.28721	50.7	-	LSEV01	191	5560	5186	5/5/16	2/25/17	Contig	Swansea University	SAMN04273128	GCA_001638165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/165/GCA_001638165.1_ASM163816v1	-	U92
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34656	65.6	-	CPCI01	94	4266	4053	3/23/15	3/12/17	Scaffold	SC	SAMEA1707128	GCA_001386835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/835/GCA_001386835.1_8898_8_69	-	2273X
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.1417	39.7	-	CKEM01	176	2282	2026	3/21/15	3/14/17	Scaffold	SC	SAMEA1023745	GCA_001141845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/845/GCA_001141845.1_6630_2_20	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08435	39.6	-	CLXN01	75	2309	2079	3/21/15	3/11/17	Scaffold	SC	SAMEA1028791	GCA_001141865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/865/GCA_001141865.1_6983_6_25	-	SMRU2329
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35551	65.6	-	CPIN01	81	4275	4045	3/23/15	3/12/17	Scaffold	SC	SAMEA1707130	GCA_001386855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/855/GCA_001386855.1_8987_5_12	-	2538K
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.19611	50.7	-	LSEX01	262	5470	5123	5/5/16	2/25/17	Contig	Swansea University	SAMN04273130	GCA_001638205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/205/GCA_001638205.1_ASM163820v1	-	WCE208
Salmonella enterica subsp. enterica serovar Muenster	82689	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.71804	52.1	-	MYFX01	47	4819	4580	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03264936	GCA_002050495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/495/GCA_002050495.1_ASM205049v1	-	98-0001
Staphylococcus aureus M1205	1402710	PRJNA220060	220060	Terrabacteria group	Firmicutes	2.86062	32.8	-	JEFK01	51	3023	2847	2/19/14	3/3/17	Contig	Broad Institute	SAMN02360867	GCA_000592945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/945/GCA_000592945.1_Stap_aure_M1205_V1	-	M1205
Staphylococcus aureus M1202	1402707	PRJNA220057	220057	Terrabacteria group	Firmicutes	2.85957	32.9	-	JEFL01	12	2996	2836	2/19/14	3/3/17	Contig	Broad Institute	SAMN02360864	GCA_000592965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/965/GCA_000592965.1_Stap_aure_M1202_V1	-	M1202
Salmonella enterica subsp. enterica serovar Gaminara	913070	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.53891	52.2	-	MYFZ01	52	4578	4355	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03264893	GCA_002050505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/505/GCA_002050505.1_ASM205050v1	-	96-0357
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.13851	50.8	-	LSEY01	129	5368	5046	5/5/16	2/25/17	Contig	Swansea University	SAMN04273131	GCA_001638225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/638/225/GCA_001638225.1_ASM163822v1	-	WCE233
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37543	65.6	-	CPGH01	82	4308	4064	3/23/15	3/12/17	Scaffold	SC	SAMEA1707132	GCA_001386875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/875/GCA_001386875.1_8987_4_28	-	0428R
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.06049	39.7	-	CKAZ01	56	2251	2032	3/21/15	3/4/17	Scaffold	SC	SAMEA974634	GCA_001141985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/985/GCA_001141985.1_6259_7_14	-	17F
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.01569	40	-	CKAO01	590	2252	2017	3/21/15	3/4/17	Scaffold	SC	SAMEA974700	GCA_001142065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/065/GCA_001142065.1_6259_6_21	-	6A
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35929	65.6	-	CPIM01	87	4278	4041	3/23/15	3/12/17	Scaffold	SC	SAMEA1707134	GCA_001386895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/895/GCA_001386895.1_8987_5_13	-	2539L
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.31606	50.6	-	LSGT01	202	5580	5206	5/8/16	2/25/17	Contig	Swansea University	SAMN04457315	GCA_001640205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/205/GCA_001640205.1_ASM164020v1	-	U79
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72216	52.1	-	MYFS01	71	4757	4507	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03264918	GCA_002050525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/525/GCA_002050525.1_ASM205052v1	-	04-0597
Staphylococcus aureus M1191	1402699	PRJNA220049	220049	Terrabacteria group	Firmicutes	2.86761	32.8	-	JEFM01	47	3014	2853	2/19/14	3/3/17	Contig	Broad Institute	SAMN02360856	GCA_000592985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/592/985/GCA_000592985.1_Stap_aure_M1191_V1	-	M1191
Staphylococcus aureus M1190	1402698	PRJNA220048	220048	Terrabacteria group	Firmicutes	2.93141	32.9	-	JEFN01	37	3101	2928	2/19/14	3/3/17	Contig	Broad Institute	SAMN02360855	GCA_000593005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/005/GCA_000593005.1_Stap_aure_M1190_V1	-	M1190
Salmonella enterica subsp. enterica serovar Muenster	82689	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.85479	52	-	MYGE01	81	5012	4756	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03264935	GCA_002050585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/585/GCA_002050585.1_ASM205058v1	-	2009K0797
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.36082	50.6	-	LSGU01	273	5692	5296	5/8/16	2/25/17	Contig	Swansea University	SAMN04457316	GCA_001640245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/245/GCA_001640245.1_ASM164024v1	-	WCE307
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36272	65.6	-	CPDH01	65	4282	4073	3/23/15	3/12/17	Scaffold	SC	SAMEA1707135	GCA_001386915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/915/GCA_001386915.1_8898_8_92	-	2248V
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.09	39.8	-	CMVA01	101	2242	1980	3/22/15	3/15/17	Scaffold	SC	SAMEA1022845	GCA_001142105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/105/GCA_001142105.1_5750_2_3	-	238
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.22582	39.5	-	CPLQ01	88	2469	2217	3/23/15	3/4/17	Scaffold	SC	SAMEA1408290	GCA_001142205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/205/GCA_001142205.1_7444_8_80	-	0407+30157
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35909	65.6	-	CPIL01	82	4285	4040	3/23/15	3/12/17	Scaffold	SC	SAMEA1707137	GCA_001386935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/935/GCA_001386935.1_8987_5_11	-	2537J
Escherichia coli	562	PRJNA319130	319130	Proteobacteria	Gammaproteobacteria	4.6769	50.8	-	LXPV01	91	4887	4528	5/10/16	2/25/17	Contig	University of Florida	SAMN04943271	GCA_001641435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/435/GCA_001641435.1_ASM164143v1	-	KCJK1733
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.20835	52	-	MYGA01	161	5359	5038	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03264968	GCA_002050595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/595/GCA_002050595.1_ASM205059v1	-	95-0466
Staphylococcus aureus M1179	1402688	PRJNA220038	220038	Terrabacteria group	Firmicutes	2.82745	32.8	-	JEFO01	29	2960	2801	2/19/14	3/3/17	Contig	Broad Institute	SAMN02360845	GCA_000593025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/025/GCA_000593025.1_Stap_aure_M1179_V1	-	M1179
Staphylococcus aureus M1178	1402687	PRJNA220037	220037	Terrabacteria group	Firmicutes	2.88266	32.8	-	JEFP01	41	3040	2871	2/19/14	3/3/17	Contig	Broad Institute	SAMN02360844	GCA_000593045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/045/GCA_000593045.1_Stap_aure_M1178_V1	-	M1178
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.71742	52.1	-	MYGB01	82	4753	4504	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03264917	GCA_002050605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/605/GCA_002050605.1_ASM205060v1	-	94-0611
Escherichia coli	562	PRJNA319130	319130	Proteobacteria	Gammaproteobacteria	5.01115	50.4	-	LXPY01	101	5221	4850	5/10/16	2/25/17	Contig	University of Florida	SAMN04943300	GCA_001641555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/555/GCA_001641555.1_ASM164155v1	-	KCJK1734
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35348	65.6	-	CPHC01	89	4273	4052	3/22/15	3/12/17	Scaffold	SC	SAMEA1707139	GCA_001386955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/955/GCA_001386955.1_8987_4_51	-	0323C
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.14727	39.5	-	CLHW01	68	2372	2145	3/21/15	3/4/17	Scaffold	SC	SAMEA1026176	GCA_001142245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/245/GCA_001142245.1_6925_5_24	-	SMRU2184
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09225	39.7	-	CKSV01	52	2307	2085	3/21/15	3/4/17	Scaffold	SC	SAMEA1026197	GCA_001142265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/265/GCA_001142265.1_6823_1_17	-	SMRU1865
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34493	65.6	-	CPCH01	82	4273	4055	3/22/15	3/12/17	Scaffold	SC	SAMEA1707141	GCA_001386975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/975/GCA_001386975.1_8898_8_67	-	2209C
Escherichia coli	562	PRJNA309210	309210	Proteobacteria	Gammaproteobacteria	5.14475	50.5	-	LSBV01	309	5223	4753	5/10/16	3/5/17	Contig	University of the Ryukyus	SAMN04423149	GCA_001641845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/845/GCA_001641845.1_ASM164184v1	-	32122
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.15054	51.7	-	MYGG01	158	5269	4905	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03264916	GCA_002050645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/645/GCA_002050645.1_ASM205064v1	-	07-0703
Staphylococcus aureus M1161	1402673	PRJNA220023	220023	Terrabacteria group	Firmicutes	2.86239	32.9	-	JEFQ01	12	2998	2835	2/19/14	3/3/17	Contig	Broad Institute	SAMN02360830	GCA_000593065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/065/GCA_000593065.1_Stap_aure_M1161_V1	-	M1161
Staphylococcus aureus M1157	1402669	PRJNA220019	220019	Terrabacteria group	Firmicutes	2.91601	32.9	-	JEFR01	16	3068	2906	2/19/14	3/3/17	Contig	Broad Institute	SAMN02360826	GCA_000593085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/085/GCA_000593085.1_Stap_aure_M1157_V1	-	M1157
Salmonella enterica subsp. enterica serovar Gaminara	913070	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80749	52	-	MYGH01	671	4802	4518	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03264892	GCA_002050675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/675/GCA_002050675.1_ASM205067v1	-	07-0467
Escherichia coli	562	PRJNA309212	309212	Proteobacteria	Gammaproteobacteria	5.07535	50.5	-	LSBT01	162	5193	4744	5/10/16	2/25/17	Contig	University of the Ryukyus	SAMN04423151	GCA_001641865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/865/GCA_001641865.1_ASM164186v1	-	31111
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34944	65.6	-	CPGK01	83	4283	4074	3/22/15	3/12/17	Scaffold	SC	SAMEA1707144	GCA_001386995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/386/995/GCA_001386995.1_8987_4_27	-	0284K
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.14432	39.5	-	CPTQ01	72	2360	2119	3/22/15	3/4/17	Scaffold	SC	SAMEA1408213	GCA_001142365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/365/GCA_001142365.1_7444_8_65	-	0211+13275
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08357	39.5	-	CLNX01	74	2275	2050	3/21/15	3/4/17	Scaffold	SC	SAMEA1028969	GCA_001142385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/385/GCA_001142385.1_6949_1_13	-	SMRU2413
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3416	65.6	-	CPDB01	89	4255	4059	3/22/15	3/12/17	Scaffold	SC	SAMEA1707146	GCA_001387015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/015/GCA_001387015.1_8898_8_86	-	2297Y
Escherichia coli	562	PRJNA309207	309207	Proteobacteria	Gammaproteobacteria	5.13341	50.5	-	LSBX01	323	5202	4777	5/10/16	3/5/17	Contig	University of the Ryukyus	SAMN04423145	GCA_001641875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/875/GCA_001641875.1_ASM164187v1	-	31122
Salmonella enterica subsp. enterica serovar Muenster	82689	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.62921	52.2	-	MYGI01	55	4689	4452	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03264934	GCA_002050685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/685/GCA_002050685.1_ASM205068v1	-	07-0237
Staphylococcus aureus M1154	1402666	PRJNA220016	220016	Terrabacteria group	Firmicutes	2.866	32.8	-	JEFS01	51	3014	2854	2/19/14	3/3/17	Contig	Broad Institute	SAMN02360823	GCA_000593105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/105/GCA_000593105.1_Stap_aure_M1154_V1	-	M1154
Staphylococcus aureus M1150	1402662	PRJNA220012	220012	Terrabacteria group	Firmicutes	2.86837	32.8	-	JEFT01	47	3021	2853	2/19/14	3/3/17	Contig	Broad Institute	SAMN02360819	GCA_000593125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/125/GCA_000593125.1_Stap_aure_M1150_V1	-	M1150
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.04099	52.1	-	MYGJ01	174	5159	4846	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03264967	GCA_002050715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/715/GCA_002050715.1_ASM205071v1	-	07-0123
Escherichia coli	562	PRJNA309209	309209	Proteobacteria	Gammaproteobacteria	5.01275	50.5	-	LSBW01	218	5125	4636	5/10/16	3/5/17	Contig	University of the Ryukyus	SAMN04423147	GCA_001641925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/925/GCA_001641925.1_ASM164192v1	-	TN1
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38452	65.6	-	CPCZ01	83	4294	4086	3/23/15	3/12/17	Scaffold	SC	SAMEA1707147	GCA_001387035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/035/GCA_001387035.1_8898_8_85	-	2276A
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.02594	39.8	-	CPNJ01	113	2158	2001	3/23/15	3/4/17	Scaffold	SC	SAMEA682415	GCA_001142405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/405/GCA_001142405.1_5366_7_8	-	09B00083
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.04342	39.6	-	CIMS01	54	2241	2023	3/21/15	3/4/17	Scaffold	SC	SAMEA1024867	GCA_001142485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/485/GCA_001142485.1_6731_4_3	-	SMRU1059
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34766	65.6	-	CPCF01	92	4263	4055	3/23/15	3/12/17	Scaffold	SC	SAMEA1707148	GCA_001387055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/055/GCA_001387055.1_8898_8_64	-	2328G
Escherichia coli	562	PRJNA309211	309211	Proteobacteria	Gammaproteobacteria	5.06063	50.5	-	LSBU01	203	5197	4651	5/10/16	3/5/17	Contig	University of the Ryukyus	SAMN04423150	GCA_001641935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/935/GCA_001641935.1_ASM164193v1	-	32111
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7329	52.2	-	MYGL01	70	4823	4570	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03264990	GCA_002050735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/735/GCA_002050735.1_ASM205073v1	-	06-0615
Staphylococcus aureus M1145	1402657	PRJNA220007	220007	Terrabacteria group	Firmicutes	2.8853	32.8	-	JEFU01	64	3071	2892	2/19/14	3/3/17	Contig	Broad Institute	SAMN02360814	GCA_000593145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/145/GCA_000593145.1_Stap_aure_M1145_V1	-	M1145
Staphylococcus aureus M1143	1402655	PRJNA220005	220005	Terrabacteria group	Firmicutes	2.87404	32.9	-	JEFV01	27	3017	2844	2/19/14	3/3/17	Contig	Broad Institute	SAMN02360812	GCA_000593165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/165/GCA_000593165.1_Stap_aure_M1143_V1	-	M1143
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70627	52.2	-	MYGM01	99	4776	4531	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359754	GCA_002050755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/755/GCA_002050755.1_ASM205075v1	-	BCW_5911
Escherichia coli	562	PRJNA309214	309214	Proteobacteria	Gammaproteobacteria	4.81695	50.7	-	LSBS01	371	4989	4522	5/10/16	3/9/17	Contig	University of the Ryukyus	SAMN04423153	GCA_001641955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/955/GCA_001641955.1_ASM164195v1	-	3c112
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35297	65.6	-	CPDD01	79	4275	4071	3/23/15	3/12/17	Scaffold	SC	SAMEA1707149	GCA_001387075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/075/GCA_001387075.1_8898_8_88	-	2335P
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.01973	39.8	-	CRJX01	49	2241	2028	3/22/15	3/4/17	Scaffold	SC	SAMEA1025661	GCA_001142505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/505/GCA_001142505.1_6753_3_2	-	SMRU1514
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.17374	39.4	-	CMEB01	57	2397	2171	3/21/15	3/10/17	Scaffold	SC	SAMEA1029053	GCA_001142585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/585/GCA_001142585.1_7011_4_16	-	SMRU2776
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.33973	65.6	-	CPCE01	74	4253	4065	3/22/15	3/12/17	Scaffold	SC	SAMEA1707150	GCA_001387095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/095/GCA_001387095.1_8898_8_63	-	2314R
Escherichia coli PCN009	1001988	PRJNA64997	64997	Proteobacteria	Gammaproteobacteria	4.8478	50.7	-	AFAS01	248	5131	4706	5/11/16	2/25/17	Contig	Huazhong Agricultural University	SAMN04964662	GCA_001642285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/285/GCA_001642285.1_ASM164228v1	-	PCN009
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70555	52.2	-	MYGN01	45	4780	4511	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359753	GCA_002050775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/775/GCA_002050775.1_ASM205077v1	-	BCW_5910
Staphylococcus aureus M1123	1402638	PRJNA219988	219988	Terrabacteria group	Firmicutes	2.90638	32.8	-	JEFW01	62	3075	2894	2/19/14	3/3/17	Contig	Broad Institute	SAMN02360795	GCA_000593185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/185/GCA_000593185.1_Stap_aure_M1123_V1	-	M1123
Staphylococcus aureus M1115	1402632	PRJNA219982	219982	Terrabacteria group	Firmicutes	2.88571	32.9	-	JEFX01	62	3052	2891	2/19/14	3/3/17	Contig	Broad Institute	SAMN02360789	GCA_000593205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/205/GCA_000593205.1_Stap_aure_M1115_V1	-	M1115
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7031	52.1	-	MYGQ01	50	4809	4555	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359749	GCA_002050795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/795/GCA_002050795.1_ASM205079v1	-	BCW_5906
Escherichia coli PCN079	1001991	PRJNA65003	65003	Proteobacteria	Gammaproteobacteria	5.4282	50.2	-	AFAV01	214	5652	5272	5/11/16	2/25/17	Contig	Huazhong Agricultural University	SAMN04964663	GCA_001642295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/295/GCA_001642295.1_ASM164229v1	-	PCN079
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35133	65.6	-	CPDC01	90	4271	4063	3/22/15	3/12/17	Scaffold	SC	SAMEA1707151	GCA_001387115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/115/GCA_001387115.1_8898_8_87	-	2317V
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.07674	39.7	-	CMOE01	39	2325	2086	3/22/15	3/10/17	Scaffold	SC	SAMEA2061493	GCA_001142605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/605/GCA_001142605.1_9803_7_21	-	32F
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11057	39.7	-	CRNO01	48	2348	2097	3/23/15	3/11/17	Scaffold	SC	SAMEA1024619	GCA_001142725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/725/GCA_001142725.1_6755_4_22	-	SMRU1150
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38096	65.6	-	CPHH01	78	4287	4082	3/23/15	3/12/17	Scaffold	SC	SAMEA1707152	GCA_001387135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/135/GCA_001387135.1_8987_4_6	-	0601E
Escherichia coli	562	PRJNA319331	319331	Proteobacteria	Gammaproteobacteria	5.17116	50.6	-	LWQZ01	157	5447	5042	5/16/16	2/25/17	Contig	New Jersey Medical School-Rutgers University	SAMN04884976	GCA_001644175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/644/175/GCA_001644175.1_ASM164417v1	-	BJ10
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69515	52	-	MYGT01	81	4772	4531	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359746	GCA_002050805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/805/GCA_002050805.1_ASM205080v1	-	BCW_5903
Staphylococcus aureus M1111	1402628	PRJNA219978	219978	Terrabacteria group	Firmicutes	2.92185	32.9	-	JEFY01	74	3092	2910	2/19/14	3/3/17	Contig	Broad Institute	SAMN02360785	GCA_000593225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/225/GCA_000593225.1_Stap_aure_M1111_V1	-	M1111
Staphylococcus aureus M1106	1402624	PRJNA219974	219974	Terrabacteria group	Firmicutes	2.879	32.8	-	JEFZ01	55	3050	2871	2/19/14	3/3/17	Contig	Broad Institute	SAMN02360781	GCA_000593245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/245/GCA_000593245.1_Stap_aure_M1106_V1	-	M1106
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.96842	52.1	-	MYFR01	111	5075	4764	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03264969	GCA_002050835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/835/GCA_002050835.1_ASM205083v1	-	04-0604
Escherichia coli	562	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.29226	50.8601	plasmid unnamed1:NZ_CM004378.1/CM004378.1	LXPF01	4	5564	5172	5/16/16	2/25/17	Contig	CDC	SAMN04851093	GCA_001645225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/225/GCA_001645225.1_ASM164522v1	-	2011C-3198
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36306	65.6	-	CPIQ01	87	4287	4059	3/22/15	3/12/17	Scaffold	SC	SAMEA1707153	GCA_001387155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/155/GCA_001387155.1_8987_5_20	-	2567R
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21129	39.6	-	CPMJ01	93	2452	2210	3/22/15	3/10/17	Scaffold	SC	SAMEA1408353	GCA_001142765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/765/GCA_001142765.1_7444_8_43	-	0005+24045
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.04916	39.7	-	CLRY01	58	2250	2032	3/21/15	3/11/17	Scaffold	SC	SAMEA1028682	GCA_001142825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/825/GCA_001142825.1_6972_3_13	-	SMRU2581
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37027	65.6	-	CPIY01	61	4274	4038	3/23/15	3/12/17	Scaffold	SC	SAMEA1707154	GCA_001387175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/175/GCA_001387175.1_8987_5_38	-	2593V
Escherichia coli	562	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.54327	50.7407	plasmid unnamed1:NZ_CM004379.1/CM004379.1; plasmid unnamed2:NZ_CM004380.1/CM004380.1	LXPG01	4	5930	5503	5/16/16	2/25/17	Contig	CDC	SAMN04851094	GCA_001645235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/235/GCA_001645235.1_ASM164523v1	-	2011C-4315
Salmonella enterica subsp. enterica serovar Miami	286780	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.58061	52.1	-	MYFT01	54	4665	4384	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03265054	GCA_002050855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/855/GCA_002050855.1_ASM205085v1	-	03-0480
Staphylococcus aureus M1105	1402623	PRJNA219973	219973	Terrabacteria group	Firmicutes	2.91584	32.9	-	JEGA01	21	3070	2905	2/19/14	3/3/17	Contig	Broad Institute	SAMN02360780	GCA_000593265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/265/GCA_000593265.1_Stap_aure_M1105_V1	-	M1105
Staphylococcus aureus M1332	1402810	PRJNA220160	220160	Terrabacteria group	Firmicutes	2.86722	32.9	-	JEFB01	59	3028	2858	2/19/14	3/3/17	Contig	Broad Institute	SAMN02360967	GCA_000593385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/385/GCA_000593385.1_Stap_aure_M1332_V1	-	M1332
Salmonella enterica subsp. enterica serovar Muenster	82689	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.5932	52.2	-	MYFU01	37	4630	4395	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03264937	GCA_002050875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/875/GCA_002050875.1_ASM205087v1	-	03-0374
Escherichia coli	562	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.3518	50.5746	plasmid unnamed1:NZ_CM004381.1/CM004381.1	LXPH01	3	5689	5225	5/16/16	2/25/17	Contig	CDC	SAMN04851095	GCA_001645245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/645/245/GCA_001645245.1_ASM164524v1	-	2014C-3250
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36209	65.6	-	CPDQ01	59	4272	4077	3/22/15	3/12/17	Scaffold	SC	SAMEA1707156	GCA_001387195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/195/GCA_001387195.1_8939_3_14	-	2478V
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.01294	39.7	-	CLSE01	44	2223	2017	3/21/15	3/10/17	Scaffold	SC	SAMEA1028601	GCA_001142865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/865/GCA_001142865.1_6972_3_2	-	SMRU2570
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.0408	39.8	-	CPQZ01	107	2234	1943	3/22/15	3/10/17	Scaffold	SC	SAMEA1020433	GCA_001142905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/905/GCA_001142905.1_6259_1_14	-	SN26573
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35066	65.6	-	CPHD01	82	4268	4060	3/23/15	3/12/17	Scaffold	SC	SAMEA1707157	GCA_001387215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/215/GCA_001387215.1_8987_4_5	-	0469L
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.10556	50.8	-	LRHQ01	140	5354	5014	5/1/16	2/25/17	Contig	Swansea University	SAMN04273062	GCA_001647315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/315/GCA_001647315.1_ASM164731v1	-	1019
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.92191	52	-	MYFV01	344	5000	4722	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03264992	GCA_002050885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/885/GCA_002050885.1_ASM205088v1	-	02-0459
Staphylococcus aureus W31947	1410698	PRJNA224328	224328	Terrabacteria group	Firmicutes	2.91183	32.7	-	JDFZ01	21	3073	2947	2/5/14	3/3/17	Contig	Broad Institute	SAMN02383618	GCA_000593405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/405/GCA_000593405.1_Stap_aure_W31947_V1	-	W31947
Staphylococcus aureus H90284	1410702	PRJNA224332	224332	Terrabacteria group	Firmicutes	2.83302	32.8	-	JDGA01	67	3005	2822	2/5/14	3/3/17	Contig	Broad Institute	SAMN02383622	GCA_000593425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/425/GCA_000593425.1_Stap_aure_H90284_V1	-	H90284
Salmonella enterica subsp. enterica serovar Miami	286780	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.61672	52	-	MYFW01	75	4730	4446	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03265053	GCA_002050915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/915/GCA_002050915.1_ASM205091v1	-	00-0507
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.10778	50.8	-	LRHR01	114	5325	5025	5/1/16	2/25/17	Contig	Swansea University	SAMN04273063	GCA_001647325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/325/GCA_001647325.1_ASM164732v1	-	1039
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.4031	65.6	-	CPIP01	76	4314	4076	3/23/15	3/12/17	Scaffold	SC	SAMEA1707160	GCA_001387235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/235/GCA_001387235.1_8987_5_18	-	2565P
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.19468	39.6	-	CKLA01	81	2418	2174	3/21/15	3/11/17	Scaffold	SC	SAMEA1024210	GCA_001142925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/925/GCA_001142925.1_6631_7_6	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.14371	39.6	-	CLIE01	74	2376	2141	3/21/15	3/10/17	Scaffold	SC	SAMEA1025775	GCA_001142945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/945/GCA_001142945.1_6925_6_19	-	SMRU2203
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35648	65.6	-	CPCY01	72	4281	4051	3/23/15	3/12/17	Scaffold	SC	SAMEA1707163	GCA_001387255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/255/GCA_001387255.1_8898_8_83	-	2214H
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.09968	50.6	-	LRHP01	106	5248	4971	5/1/16	2/25/17	Contig	Swansea University	SAMN04273061	GCA_001647335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/335/GCA_001647335.1_ASM164733v1	-	1011
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.60513	52.3	-	MYFY01	58	4669	4434	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03264991	GCA_002050935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/935/GCA_002050935.1_ASM205093v1	-	96-0578
Staphylococcus aureus H12822	1410707	PRJNA224337	224337	Terrabacteria group	Firmicutes	2.91468	32.7	-	JDGB01	28	3078	2943	2/5/14	3/3/17	Contig	Broad Institute	SAMN02383627	GCA_000593445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/445/GCA_000593445.1_Stap_aure_H12822_V1	-	H12822
Staphylococcus aureus T59609	1410718	PRJNA224348	224348	Terrabacteria group	Firmicutes	2.84067	32.7	-	JDGC01	20	2971	2847	2/5/14	3/3/17	Contig	Broad Institute	SAMN02383638	GCA_000593465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/465/GCA_000593465.1_Stap_aure_T59609_V1	-	T59609
Salmonella enterica subsp. enterica serovar Miami	286780	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.58082	52.1	-	MYGD01	195	4634	4363	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03265052	GCA_002050945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/945/GCA_002050945.1_ASM205094v1	-	2011K-1114
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.07831	50.8	-	LRHS01	136	5307	4965	5/1/16	2/25/17	Contig	Swansea University	SAMN04273064	GCA_001647345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/345/GCA_001647345.1_ASM164734v1	-	1087
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35067	65.6	-	CPGQ01	82	4274	4067	3/23/15	3/12/17	Scaffold	SC	SAMEA1707165	GCA_001387275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/275/GCA_001387275.1_8987_4_4	-	0392C
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.12512	39.5	-	CKIK01	76	2348	2138	3/21/15	3/10/17	Scaffold	SC	SAMEA1023946	GCA_001142985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/985/GCA_001142985.1_6631_3_4	-	19B
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.14762	39.6	-	CLKS01	70	2394	2169	3/21/15	3/11/17	Scaffold	SC	SAMEA1028782	GCA_001143125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/125/GCA_001143125.1_6938_5_14	-	SMRU2654
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34733	65.6	-	CPHO01	80	4267	4058	3/23/15	3/12/17	Scaffold	SC	SAMEA1707166	GCA_001387295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/295/GCA_001387295.1_8987_4_69	-	0552B
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.07851	50.8	-	LRHT01	135	5327	4992	5/1/16	2/25/17	Contig	Swansea University	SAMN04273065	GCA_001647395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/395/GCA_001647395.1_ASM164739v1	-	1223
Salmonella enterica subsp. enterica serovar Miami	286780	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83472	52	-	MYGF01	90	5027	4711	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03265051	GCA_002050975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/975/GCA_002050975.1_ASM205097v1	-	08-0143
Staphylococcus aureus M16486	1410730	PRJNA224360	224360	Terrabacteria group	Firmicutes	2.8419	32.8	-	JDGD01	37	3011	2837	2/5/14	3/3/17	Contig	Broad Institute	SAMN02383650	GCA_000593485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/485/GCA_000593485.1_Stap_aure_M16486_V1	-	M16486
Staphylococcus aureus T66243	1410739	PRJNA224369	224369	Terrabacteria group	Firmicutes	2.90949	32.7	-	JDGE01	43	3081	2913	2/5/14	3/3/17	Contig	Broad Institute	SAMN02383659	GCA_000593505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/505/GCA_000593505.1_Stap_aure_T66243_V1	-	T66243
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.73532	52.1	-	MYGO01	135	4813	4541	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359751	GCA_002051005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/005/GCA_002051005.1_ASM205100v1	-	BCW_5908
Escherichia coli	562	PRJNA295914	295914	Proteobacteria	Gammaproteobacteria	5.02397	50.7	-	LRHU01	72	5171	4889	5/1/16	2/25/17	Contig	Swansea University	SAMN04273066	GCA_001647405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/647/405/GCA_001647405.1_ASM164740v1	-	1351
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36143	65.6	-	CPGO01	58	4270	4051	3/23/15	3/12/17	Scaffold	SC	SAMEA1707167	GCA_001387315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/315/GCA_001387315.1_8987_4_3	-	0195N
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12757	39.7	-	CLQL01	57	2387	2141	3/21/15	3/10/17	Scaffold	SC	SAMEA1028675	GCA_001143145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/145/GCA_001143145.1_6949_4_18	-	SMRU2490
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.01592	39.7	-	CKDA01	43	2224	1989	3/21/15	3/11/17	Scaffold	SC	SAMEA1023890	GCA_001143225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/225/GCA_001143225.1_6593_5_3	-	28F
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35662	65.6	-	CPDA01	83	4263	4063	3/22/15	3/12/17	Scaffold	SC	SAMEA1707169	GCA_001387335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/335/GCA_001387335.1_8898_8_84	-	type strain: 2247
Escherichia coli	562	PRJNA320043	320043	Proteobacteria	Gammaproteobacteria	4.97819	50.6	-	LXQL01	50	5091	4835	5/19/16	2/25/17	Contig	Hopital Beaujon	SAMN04914651	GCA_001648715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/715/GCA_001648715.1_ASM164871v1	-	S250
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.00019	51.7	-	MYGP01	214	5138	4862	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359750	GCA_002051025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/025/GCA_002051025.1_ASM205102v1	-	BCW_5907
Staphylococcus aureus T66292	1410742	PRJNA224373	224373	Terrabacteria group	Firmicutes	2.90437	32.7	-	JDGF01	31	3051	2923	2/5/14	3/3/17	Contig	Broad Institute	SAMN02383662	GCA_000593525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/525/GCA_000593525.1_Stap_aure_T66292_V1	-	T66292
Staphylococcus aureus W12461	1410749	PRJNA224380	224380	Terrabacteria group	Firmicutes	2.85603	32.7	-	JDGG01	31	2997	2828	2/5/14	3/3/17	Contig	Broad Institute	SAMN02383669	GCA_000593545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/545/GCA_000593545.1_Stap_aure_W12461_V1	-	W12461
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69307	52	-	MYGS01	79	4775	4533	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359747	GCA_002051045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/045/GCA_002051045.1_ASM205104v1	-	BCW_5904
Escherichia coli	562	PRJNA276153	276153	Proteobacteria	Gammaproteobacteria	4.90863	50.7	-	JZDM01	123	5108	4792	5/24/16	2/25/17	Contig	U.S. Food and Drug Administration	SAMN03366858	GCA_001650505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/505/GCA_001650505.1_ASM165050v1	27208138	EC2608
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35803	65.6	-	CPIE01	84	4286	4053	3/22/15	3/12/17	Scaffold	SC	SAMEA1707171	GCA_001387355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/355/GCA_001387355.1_8987_4_96	-	1461P
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.17605	39.6	-	CLDI01	103	2447	2208	3/21/15	3/10/17	Scaffold	SC	SAMEA1026263	GCA_001143265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/265/GCA_001143265.1_6899_5_1	-	SMRU2041
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10077	39.5	-	CROY01	44	2317	2093	3/23/15	3/10/17	Scaffold	SC	SAMEA1025629	GCA_001143285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/285/GCA_001143285.1_6755_6_2	-	SMRU1178
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34419	65.6	-	CPAZ01	89	4272	4067	3/22/15	3/12/17	Scaffold	SC	SAMEA1707175	GCA_001387375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/375/GCA_001387375.1_8898_8_2	-	2163C
Escherichia coli	562	PRJNA276153	276153	Proteobacteria	Gammaproteobacteria	4.90724	50.8	-	JZDJ01	128	5113	4800	5/24/16	2/25/17	Contig	U.S. Food and Drug Administration	SAMN03366847	GCA_001650515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/515/GCA_001650515.1_ASM165051v1	27208138	MDP04-01392
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.65155	52.2	-	MYGR01	89	4768	4512	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359748	GCA_002051055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/055/GCA_002051055.1_ASM205105v1	-	BCW_5905
Staphylococcus aureus M80329	1410771	PRJNA224402	224402	Terrabacteria group	Firmicutes	2.90882	32.7	-	JDGH01	18	3063	2931	2/5/14	3/3/17	Contig	Broad Institute	SAMN02383691	GCA_000593565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/565/GCA_000593565.1_Stap_aure_M80329_V1	-	M80329
Staphylococcus aureus F46600	1410776	PRJNA224407	224407	Terrabacteria group	Firmicutes	2.91527	32.7	-	JDGI01	31	3085	2956	2/5/14	3/3/17	Contig	Broad Institute	SAMN02383696	GCA_000593585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/585/GCA_000593585.1_Stap_aure_F46600_V1	-	F46600
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89067	52.2	-	MYGU01	92	5026	4775	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359745	GCA_002051095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/095/GCA_002051095.1_ASM205109v1	-	BCW_5902
Escherichia coli	562	PRJNA276153	276153	Proteobacteria	Gammaproteobacteria	5.41571	50.2	-	JZDN01	210	5671	5218	5/24/16	2/25/17	Contig	U.S. Food and Drug Administration	SAMN03366859	GCA_001650555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/555/GCA_001650555.1_ASM165055v1	27208138	ED1914
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35259	65.6	-	CPGB01	90	4273	4058	3/22/15	3/12/17	Scaffold	SC	SAMEA1707176	GCA_001387395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/395/GCA_001387395.1_8987_4_2	-	0060R
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.08369	39.7	-	CKFE01	81	2311	2079	3/21/15	3/10/17	Scaffold	SC	SAMEA1023755	GCA_001143305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/305/GCA_001143305.1_6630_3_22	-	19F
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.13118	39.5	-	CLWZ01	61	2329	2106	3/21/15	3/11/17	Scaffold	SC	SAMEA1028992	GCA_001143325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/325/GCA_001143325.1_6983_5_19	-	SMRU2323
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35851	65.6	-	CPDN01	85	4291	4063	3/23/15	3/12/17	Scaffold	SC	SAMEA1707179	GCA_001387415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/415/GCA_001387415.1_8939_3_15	-	2492K
Escherichia coli	562	PRJNA276153	276153	Proteobacteria	Gammaproteobacteria	4.94696	50.7	-	JZDK01	105	5164	4854	5/24/16	2/25/17	Contig	U.S. Food and Drug Administration	SAMN03366856	GCA_001650565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/565/GCA_001650565.1_ASM165056v1	27208138	MDP04-02111
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.91606	52.1	-	MYGY01	129	5117	4827	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359741	GCA_002051115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/115/GCA_002051115.1_ASM205111v1	-	BCW_5898
Staphylococcus aureus F62013	1410804	PRJNA224435	224435	Terrabacteria group	Firmicutes	2.82773	32.8	-	JDGJ01	55	2984	2822	2/5/14	3/3/17	Contig	Broad Institute	SAMN02383724	GCA_000593605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/605/GCA_000593605.1_Stap_aure_F62013_V1	-	F62013
Staphylococcus aureus F55987	1410812	PRJNA224443	224443	Terrabacteria group	Firmicutes	2.86183	32.7	-	JDGK01	21	2994	2870	2/5/14	3/3/17	Contig	Broad Institute	SAMN02383732	GCA_000593625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/625/GCA_000593625.1_Stap_aure_F55987_V1	-	F55987
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.94601	52.2	-	MYGW01	109	5111	4865	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359743	GCA_002051125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/125/GCA_002051125.1_ASM205112v1	-	BCW_5900
Escherichia coli	562	PRJNA276153	276153	Proteobacteria	Gammaproteobacteria	4.99819	50.7	-	JZDL01	116	5247	4930	5/24/16	2/25/17	Contig	U.S. Food and Drug Administration	SAMN03366857	GCA_001650585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/585/GCA_001650585.1_ASM165058v1	27208138	TW10123
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3611	65.6	-	CPIG01	85	4286	4060	3/22/15	3/12/17	Scaffold	SC	SAMEA1707180	GCA_001387435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/435/GCA_001387435.1_8987_4_94	-	0650H
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.08118	39.7	-	CPMC01	389	2334	2056	3/22/15	3/11/17	Scaffold	SC	SAMEA1020578	GCA_001143345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/345/GCA_001143345.1_6237_8_14	-	S-105
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.18009	39.5	-	CKWE01	67	2450	2226	3/21/15	3/10/17	Scaffold	SC	SAMEA1025795	GCA_001143365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/365/GCA_001143365.1_6823_5_13	-	SMRU1957
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37576	65.6	-	CPCL01	69	4293	4083	3/23/15	3/12/17	Scaffold	SC	SAMEA1707182	GCA_001387455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/455/GCA_001387455.1_8898_8_71	-	2315S
Escherichia coli	562	PRJNA276153	276153	Proteobacteria	Gammaproteobacteria	5.68511	50.5	-	JZXA01	292	6098	5630	5/24/16	2/25/17	Contig	U.S. Food and Drug Administration	SAMN03400799	GCA_001650605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/650/605/GCA_001650605.1_ASM165060v1	27208138	EC1636
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.75763	52.1	-	MYGZ01	202	4864	4597	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359740	GCA_002051135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/135/GCA_002051135.1_ASM205113v1	-	BCW_5897
Staphylococcus aureus T74602	1410824	PRJNA224455	224455	Terrabacteria group	Firmicutes	2.88575	32.7	-	JDGL01	31	3032	2896	2/5/14	3/3/17	Contig	Broad Institute	SAMN02383744	GCA_000593645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/645/GCA_000593645.1_Stap_aure_T74602_V1	-	T74602
Staphylococcus aureus F86379	1410859	PRJNA224490	224490	Terrabacteria group	Firmicutes	2.89584	32.7	-	JDGM01	38	3041	2901	2/5/14	3/3/17	Contig	Broad Institute	SAMN02383779	GCA_000593665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/665/GCA_000593665.1_Stap_aure_F86379_V1	-	F86379
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.15188	52	-	MYHA01	492	5358	5030	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359739	GCA_002051165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/165/GCA_002051165.1_ASM205116v1	-	BCW_5896
Escherichia coli	562	PRJNA266030	266030	Proteobacteria	Gammaproteobacteria	5.24758	50.6	-	JSVP01	293	5576	5152	5/25/16	2/25/17	Contig	"Shanghai Majorbio Bio-pharm Technology Co.,Ltd"	SAMN03154701	GCA_001651605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/605/GCA_001651605.1_ASM165160v1	27199951	UPEC_003
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35852	65.6	-	CPIJ01	77	4285	4046	3/23/15	3/12/17	Scaffold	SC	SAMEA1707183	GCA_001387475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/475/GCA_001387475.1_8987_5_15	-	2549X
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.06701	39.7	-	CPND01	73	2258	2058	3/22/15	3/10/17	Scaffold	SC	SAMEA682510	GCA_001143385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/385/GCA_001143385.1_5366_5_10	-	08B07106
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21749	39.5	-	CPUU01	102	2457	2217	3/22/15	3/10/17	Scaffold	SC	SAMEA1408322	GCA_001143465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/465/GCA_001143465.1_7444_8_21	-	9712+30001
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36835	65.6	-	CPHQ01	67	4268	4067	3/23/15	3/12/17	Scaffold	SC	SAMEA1707184	GCA_001387495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/495/GCA_001387495.1_8987_4_72	-	type strain: 1373
Escherichia coli	562	PRJNA321591	321591	Proteobacteria	Gammaproteobacteria	5.12513	50.5	-	LXWV01	195	5381	4968	5/25/16	2/25/17	Contig	"Technical University of Denmark, National Veterinary Institute"	SAMN05000824	GCA_001652345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/345/GCA_001652345.1_ASM165234v1	27491996	E44
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.97135	52.1	-	MYHD01	211	5137	4864	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359736	GCA_002051195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/195/GCA_002051195.1_ASM205119v1	-	BCW_5893
Staphylococcus aureus F27253	1410877	PRJNA224508	224508	Terrabacteria group	Firmicutes	2.91092	32.7	-	JDGN01	28	3062	2933	2/5/14	3/3/17	Contig	Broad Institute	SAMN02383797	GCA_000593685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/685/GCA_000593685.1_Stap_aure_F27253_V1	-	F27253
Staphylococcus aureus F27254	1410878	PRJNA224509	224509	Terrabacteria group	Firmicutes	2.96922	32.7	-	JDGO01	44	3168	2988	2/5/14	3/3/17	Contig	Broad Institute	SAMN02383798	GCA_000593705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/705/GCA_000593705.1_Stap_aure_F27254_V1	-	F27254
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.93274	52.1	-	MYHF01	123	5071	4816	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359734	GCA_002051215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/215/GCA_002051215.1_ASM205121v1	-	BCW_5891
Escherichia coli	562	PRJNA319144	319144	Proteobacteria	Gammaproteobacteria	5.27137	50.5	-	LWSE01	160	5579	5222	6/2/16	2/25/17	Contig	University of Lodz	SAMN04880556	GCA_001654735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/654/735/GCA_001654735.1_ASM165473v1	-	007PP2015
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35569	65.6	-	CPHR01	83	4284	4062	3/22/15	3/12/17	Scaffold	SC	SAMEA1707186	GCA_001387535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/535/GCA_001387535.1_8987_4_73	-	0052H
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.15479	39.5	-	CLSG01	67	2382	2153	3/21/15	3/4/17	Scaffold	SC	SAMEA1028988	GCA_001143525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/525/GCA_001143525.1_6972_3_24	-	SMRU2592
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.09515	39.6	-	CLOY01	53	2300	2031	3/21/15	3/15/17	Scaffold	SC	SAMEA1028612	GCA_001143645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/645/GCA_001143645.1_6949_2_23	-	SMRU2447
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35837	65.6	-	CPCK01	77	4286	4053	3/22/15	3/12/17	Scaffold	SC	SAMEA1707187	GCA_001387555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/555/GCA_001387555.1_8898_8_70	-	2294V
Escherichia coli	562	PRJNA322744	322744	Proteobacteria	Gammaproteobacteria	5.17886	50.5	-	LYPJ01	217	5495	5087	6/2/16	2/25/17	Contig	"Technical University of Denmark, National Veterinary Institute"	SAMN05173007	GCA_001654955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/654/955/GCA_001654955.1_ASM165495v1	27491996	E51
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.87093	52.1	-	MYHE01	90	4996	4764	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359735	GCA_002051225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/225/GCA_002051225.1_ASM205122v1	-	BCW_5892
Staphylococcus aureus T72814	1410890	PRJNA224521	224521	Terrabacteria group	Firmicutes	2.85928	32.7	-	JDGP01	23	2993	2863	2/5/14	3/3/17	Contig	Broad Institute	SAMN02383810	GCA_000593725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/725/GCA_000593725.1_Stap_aure_T72814_V1	-	T72814
Staphylococcus aureus M44988	1410897	PRJNA224528	224528	Terrabacteria group	Firmicutes	2.85517	32.7	-	JDGQ01	22	3022	2856	2/5/14	3/3/17	Contig	Broad Institute	SAMN02383817	GCA_000593745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/745/GCA_000593745.1_Stap_aure_M44988_V1	-	M44988
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.90781	52.1	-	MYHH01	116	5096	4810	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359732	GCA_002051235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/235/GCA_002051235.1_ASM205123v1	-	BCW_5889
Escherichia coli	562	PRJNA319144	319144	Proteobacteria	Gammaproteobacteria	5.12087	50.6	-	LWUK01	95	5418	5034	6/3/16	2/25/17	Contig	University of Lodz	SAMN04880557	GCA_001657505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/505/GCA_001657505.1_ASM165750v1	-	009PP2015
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34835	65.6	-	CPID01	95	4271	4058	3/23/15	3/12/17	Scaffold	SC	SAMEA1707189	GCA_001387575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/575/GCA_001387575.1_8987_4_92	-	0468K
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1552	39.6	-	CLVL01	61	2412	2178	3/21/15	3/4/17	Scaffold	SC	SAMEA1026061	GCA_001143665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/665/GCA_001143665.1_6983_3_61	-	SMRU2269
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.98626	39.8	-	CQRP01	54	2210	1995	3/23/15	3/4/17	Scaffold	SC	SAMEA970209	GCA_001143685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/685/GCA_001143685.1_5159_8_5	-	BHN646
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35111	65.6	-	CPHV01	83	4272	4070	3/23/15	3/12/17	Scaffold	SC	SAMEA1707196	GCA_001387595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/595/GCA_001387595.1_8987_4_8	-	0896A
Escherichia coli	562	PRJNA319144	319144	Proteobacteria	Gammaproteobacteria	5.08157	50.5	-	LXYD01	68	5348	5036	6/8/16	2/25/17	Contig	University of Lodz	SAMN04880562	GCA_001659805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/805/GCA_001659805.1_ASM165980v1	-	015PP2015
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.93694	52.2	-	MYHK01	394	5264	4827	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359729	GCA_002051275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/275/GCA_002051275.1_ASM205127v1	-	BCW_5886
Staphylococcus aureus F12856	1411509	PRJNA224589	224589	Terrabacteria group	Firmicutes	2.88438	32.7	-	JDGR01	21	3017	2886	2/5/14	3/3/17	Contig	Broad Institute	SAMN02384055	GCA_000593765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/765/GCA_000593765.1_Stap_aure_F12856_V1	-	F12856
Staphylococcus aureus H37235	1411530	PRJNA224611	224611	Terrabacteria group	Firmicutes	2.88435	32.8	-	JDGS01	25	3040	2916	2/5/14	3/3/17	Contig	Broad Institute	SAMN02384076	GCA_000593785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/785/GCA_000593785.1_Stap_aure_H37235_V1	-	H37235
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.9552	52	-	MYHL01	309	5103	4847	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359728	GCA_002051285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/285/GCA_002051285.1_ASM205128v1	-	BCW_5885
Escherichia coli	562	PRJNA319144	319144	Proteobacteria	Gammaproteobacteria	5.16894	50.6	-	LXYC01	106	5485	5076	6/8/16	2/25/17	Contig	University of Lodz	SAMN04880564	GCA_001659815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/659/815/GCA_001659815.1_ASM165981v1	-	016PP2015
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38243	65.6	-	CPIF01	91	4279	4080	3/22/15	3/12/17	Scaffold	SC	SAMEA1707197	GCA_001387615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/615/GCA_001387615.1_8987_4_93	-	0575B
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12679	39.7	-	CMFA01	107	2313	2029	3/21/15	3/6/17	Scaffold	SC	SAMEA1028916	GCA_001143725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/725/GCA_001143725.1_7011_5_7	-	SMRU2791
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11421	39.5	-	CKAS01	135	2345	2117	3/21/15	3/4/17	Scaffold	SC	SAMEA974624	GCA_001143825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/825/GCA_001143825.1_6259_6_7	-	6C
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37449	65.6	-	CPCN01	70	4305	4086	3/23/15	3/12/17	Scaffold	SC	SAMEA1707199	GCA_001387635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/635/GCA_001387635.1_8898_8_72	-	2333M
Escherichia coli	562	PRJNA286916	286916	Proteobacteria	Gammaproteobacteria	5.17234	50.8	-	LFHT01	209	5420	5085	6/8/16	2/25/17	Contig	U.S. Food and Drug Administration	SAMN03775250	GCA_001660085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/085/GCA_001660085.1_ASM166008v1	-	87-1714
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.95032	52.2	-	MYHM01	119	5110	4852	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359727	GCA_002051305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/305/GCA_002051305.1_ASM205130v1	-	BCW_5884
Staphylococcus aureus M24487	1411549	PRJNA224630	224630	Terrabacteria group	Firmicutes	2.92799	32.8	-	JDGT01	28	3116	2947	2/5/14	3/3/17	Contig	Broad Institute	SAMN02384095	GCA_000593805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/805/GCA_000593805.1_Stap_aure_M24487_V1	-	M24487
Staphylococcus aureus T23068	1411559	PRJNA224640	224640	Terrabacteria group	Firmicutes	2.82735	32.7	-	JDGU01	27	2944	2811	2/5/14	3/3/17	Contig	Broad Institute	SAMN02384105	GCA_000593825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/825/GCA_000593825.1_Stap_aure_T23068_V1	-	T23068
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.94876	52.2	-	MYHN01	85	5110	4860	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359726	GCA_002051315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/315/GCA_002051315.1_ASM205131v1	-	BCW_5883
Escherichia coli	562	PRJNA286916	286916	Proteobacteria	Gammaproteobacteria	5.01285	50.6	-	LFHU01	201	5299	4933	6/8/16	2/25/17	Contig	U.S. Food and Drug Administration	SAMN03775325	GCA_001660095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/095/GCA_001660095.1_ASM166009v1	-	ED-53
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36381	65.6	-	CPIO01	49	4266	4052	3/22/15	3/12/17	Scaffold	SC	SAMEA1707200	GCA_001387655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/655/GCA_001387655.1_8987_5_16	-	2559H
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.23889	39.6	-	CLNU01	125	2478	2129	3/21/15	3/4/17	Scaffold	SC	SAMEA1028913	GCA_001143845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/845/GCA_001143845.1_6949_1_1	-	SMRU2401
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.18225	39.8	-	CMUP01	186	2301	2026	3/23/15	3/4/17	Scaffold	SC	SAMEA1022822	GCA_001143865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/865/GCA_001143865.1_5737_7_10	-	175
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35611	65.6	-	CPBM01	72	4265	4072	3/23/15	3/12/17	Scaffold	SC	SAMEA1707201	GCA_001387675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/675/GCA_001387675.1_8898_8_43	-	2204X
Escherichia coli	562	PRJNA286916	286916	Proteobacteria	Gammaproteobacteria	5.36305	50.4	-	LFHV01	190	5822	5377	6/8/16	2/25/17	Contig	U.S. Food and Drug Administration	SAMN03775330	GCA_001660105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/105/GCA_001660105.1_ASM166010v1	-	E-D 371
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7895	52.1	-	MYHO01	94	4892	4648	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359725	GCA_002051355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/355/GCA_002051355.1_ASM205135v1	-	BCW_5882
Staphylococcus aureus W39826	1412807	PRJNA225225	225225	Terrabacteria group	Firmicutes	2.89555	32.7	-	JDYL01	8	3050	2895	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385547	GCA_000593845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/845/GCA_000593845.1_Stap_aure_W39826_V1	-	W39826
Staphylococcus aureus W29641	1412799	PRJNA225217	225217	Terrabacteria group	Firmicutes	2.87894	32.7	-	JDYM01	30	3016	2891	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385539	GCA_000593865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/865/GCA_000593865.1_Stap_aure_W29641_V1	-	W29641
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.02925	52.1	-	MYHQ01	119	5244	4958	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359723	GCA_002051365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/365/GCA_002051365.1_ASM205136v1	-	BCW_5880
Escherichia coli	562	PRJNA286916	286916	Proteobacteria	Gammaproteobacteria	5.37824	50.6	-	LFHW01	382	5915	5347	6/8/16	2/25/17	Contig	U.S. Food and Drug Administration	SAMN03775332	GCA_001660165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/165/GCA_001660165.1_ASM166016v1	-	81-4420
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35656	65.6	-	CPHP01	82	4286	4064	3/23/15	3/12/17	Scaffold	SC	SAMEA1707202	GCA_001387695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/695/GCA_001387695.1_8987_4_7	-	0651J
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10031	39.7	-	CRHM01	58	2326	2105	3/23/15	3/4/17	Scaffold	SC	SAMEA1025325	GCA_001143905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/905/GCA_001143905.1_6736_7_21	-	SMRU1293
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.15275	39.9	-	CPKJ01	258	2319	2068	3/23/15	3/4/17	Scaffold	SC	SAMEA1019995	GCA_001143925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/925/GCA_001143925.1_5901_2_7	-	1422-00
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35	65.6	-	CPEW01	82	4280	4058	3/23/15	3/12/17	Scaffold	SC	SAMEA1707203	GCA_001387715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/715/GCA_001387715.1_8939_3_56	-	2513H
Escherichia coli	562	PRJNA286916	286916	Proteobacteria	Gammaproteobacteria	5.31094	50.3	-	LFIA01	192	5741	5292	6/8/16	2/25/17	Contig	U.S. Food and Drug Administration	SAMN03775350	GCA_001660185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/185/GCA_001660185.1_ASM166018v1	-	ESC206
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.98502	52.1	-	MYGV01	70	5154	4896	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359744	GCA_002051385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/385/GCA_002051385.1_ASM205138v1	-	BCW_5901
Staphylococcus aureus T60795	1412790	PRJNA225208	225208	Terrabacteria group	Firmicutes	2.90205	32.7	-	JDYN01	15	3066	2899	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385530	GCA_000593885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/885/GCA_000593885.1_Stap_aure_T60795_V1	-	T60795
Staphylococcus aureus T54283	1412785	PRJNA225203	225203	Terrabacteria group	Firmicutes	2.90113	32.7	-	JDYO01	14	3066	2896	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385525	GCA_000593905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/905/GCA_000593905.1_Stap_aure_T54283_V1	-	T54283
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.97293	52.1	-	MYHT01	115	5159	4884	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359720	GCA_002051405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/405/GCA_002051405.1_ASM205140v1	-	BCW_5877
Escherichia coli	562	PRJNA286916	286916	Proteobacteria	Gammaproteobacteria	5.85678	50.5	-	LFHX01	285	6399	5868	6/8/16	2/25/17	Contig	U.S. Food and Drug Administration	SAMN03775333	GCA_001660195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/195/GCA_001660195.1_ASM166019v1	-	1125/3
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35095	65.6	-	CPHT01	81	4272	4058	3/23/15	3/12/17	Scaffold	SC	SAMEA1707205	GCA_001387735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/735/GCA_001387735.1_8987_4_75	-	0365Y
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.27045	39.4	-	CMJX01	85	2500	2227	3/23/15	3/4/17	Scaffold	SC	SAMEA1025950	GCA_001143945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/945/GCA_001143945.1_7038_8_44	-	SMRU2252
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.17968	39.6	-	CKWG01	79	2406	2143	3/21/15	3/10/17	Scaffold	SC	SAMEA1025730	GCA_001144085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/085/GCA_001144085.1_6823_5_14	-	SMRU1958
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36009	65.6	-	CPBN01	74	4279	4054	3/23/15	3/12/17	Scaffold	SC	SAMEA1707206	GCA_001387755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/755/GCA_001387755.1_8898_8_45	-	2266P
Escherichia coli	562	PRJNA286916	286916	Proteobacteria	Gammaproteobacteria	5.08787	50.7	-	LFIE01	130	5349	4999	6/8/16	2/25/17	Contig	U.S. Food and Drug Administration	SAMN03775370	GCA_001660245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/245/GCA_001660245.1_ASM166024v1	-	ESC146
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.9914	52.1	-	MYGX01	111	5195	4915	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359742	GCA_002051435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/435/GCA_002051435.1_ASM205143v1	-	BCW_5899
Staphylococcus aureus M80992	1412769	PRJNA225187	225187	Terrabacteria group	Firmicutes	2.8862	32.7	-	JDYP01	38	3031	2860	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385509	GCA_000593925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/925/GCA_000593925.1_Stap_aure_M80992_V1	-	M80992
Staphylococcus aureus M16597	1412761	PRJNA225179	225179	Terrabacteria group	Firmicutes	2.92501	32.8	-	JDYQ01	27	3116	2949	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385501	GCA_000593945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/945/GCA_000593945.1_Stap_aure_M16597_V1	-	M16597
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.93396	52.1	-	MYHB01	135	5092	4821	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359738	GCA_002051445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/445/GCA_002051445.1_ASM205144v1	-	BCW_5895
Escherichia coli	562	PRJNA286916	286916	Proteobacteria	Gammaproteobacteria	5.05786	50.6	-	LFIF01	137	5293	4962	6/8/16	2/25/17	Contig	U.S. Food and Drug Administration	SAMN03775371	GCA_001660255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/255/GCA_001660255.1_ASM166025v1	-	ESC173
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36106	65.6	-	CPEG01	65	4263	4071	3/22/15	3/12/17	Scaffold	SC	SAMEA1707208	GCA_001387775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/775/GCA_001387775.1_8939_3_34	-	2357N
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10644	39.5	-	CLPW01	48	2332	2107	3/21/15	3/10/17	Scaffold	SC	SAMEA1028963	GCA_001144165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/165/GCA_001144165.1_6949_3_22	-	SMRU2470
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.15029	39.5	-	CLVQ01	76	2375	2155	3/21/15	3/10/17	Scaffold	SC	SAMEA1025784	GCA_001144285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/285/GCA_001144285.1_6983_4_76	-	SMRU2284
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35517	65.6	-	CPBP01	90	4279	4065	3/22/15	3/12/17	Scaffold	SC	SAMEA1707210	GCA_001387795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/795/GCA_001387795.1_8898_8_46	-	2287M
Escherichia coli	562	PRJNA286916	286916	Proteobacteria	Gammaproteobacteria	5.16995	50.6	-	LFIG01	104	5444	5091	6/8/16	2/25/17	Contig	U.S. Food and Drug Administration	SAMN03775377	GCA_001660275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/275/GCA_001660275.1_ASM166027v1	-	ESC256
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.93985	52.2	-	MYHG01	112	5080	4837	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359733	GCA_002051475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/475/GCA_002051475.1_ASM205147v1	-	BCW_5890
Staphylococcus aureus M13048	1412756	PRJNA225174	225174	Terrabacteria group	Firmicutes	2.92915	32.8	-	JDYR01	12	3110	2953	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385496	GCA_000593965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/965/GCA_000593965.1_Stap_aure_M13048_V1	-	M13048
Staphylococcus aureus H85008	1412752	PRJNA225170	225170	Terrabacteria group	Firmicutes	2.87184	32.7	-	JDYS01	11	3025	2869	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385492	GCA_000593985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/593/985/GCA_000593985.1_Stap_aure_H85008_V1	-	H85008
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.96981	52.1	-	MYHI01	111	5138	4866	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359731	GCA_002051485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/485/GCA_002051485.1_ASM205148v1	-	BCW_5888
Escherichia coli	562	PRJNA286916	286916	Proteobacteria	Gammaproteobacteria	5.34434	50.3	-	LFHZ01	192	5727	5328	6/8/16	2/25/17	Contig	U.S. Food and Drug Administration	SAMN03775349	GCA_001660305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/305/GCA_001660305.1_ASM166030v1	-	ESC226
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3499	65.6	-	CPEF01	75	4270	4060	3/22/15	3/12/17	Scaffold	SC	SAMEA1707213	GCA_001387815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/815/GCA_001387815.1_8939_3_33	-	2341W
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.0708	39.6	-	CRNW01	48	2260	2007	3/23/15	3/10/17	Scaffold	SC	SAMEA1025242	GCA_001144325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/325/GCA_001144325.1_6755_5_14	-	SMRU1166
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.16133	39.6	-	CLHI01	54	2367	2131	3/21/15	3/10/17	Scaffold	SC	SAMEA1025909	GCA_001144365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/365/GCA_001144365.1_6925_5_18	-	SMRU2178
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34819	65.6	-	CPBQ01	85	4268	4060	3/22/15	3/12/17	Scaffold	SC	SAMEA1707215	GCA_001387835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/835/GCA_001387835.1_8898_8_47	-	2311N
Escherichia coli	562	PRJNA286916	286916	Proteobacteria	Gammaproteobacteria	5.56961	50.5	-	LFIB01	289	6076	5602	6/8/16	2/25/17	Contig	U.S. Food and Drug Administration	SAMN03775367	GCA_001660325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/325/GCA_001660325.1_ASM166032v1	-	ESC172
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.00575	52.1	-	MYHR01	183	5203	4926	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359722	GCA_002051515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/515/GCA_002051515.1_ASM205151v1	-	BCW_5879
Staphylococcus aureus H81885	1412748	PRJNA225166	225166	Terrabacteria group	Firmicutes	2.91155	32.8	-	JDYT01	9	3090	2929	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385488	GCA_000594005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/005/GCA_000594005.1_Stap_aure_H81885_V1	-	H81885
Staphylococcus aureus H81809	1412747	PRJNA225165	225165	Terrabacteria group	Firmicutes	2.91412	32.7	-	JDYU01	13	3082	2915	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385487	GCA_000594025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/025/GCA_000594025.1_Stap_aure_H81809_V1	-	H81809
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.9734	52.1	-	MYHP01	109	5152	4870	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359724	GCA_002051525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/525/GCA_002051525.1_ASM205152v1	-	BCW_5881
Escherichia coli	562	PRJNA286916	286916	Proteobacteria	Gammaproteobacteria	5.56455	50.4	-	LFIC01	299	6090	5608	6/8/16	2/25/17	Contig	U.S. Food and Drug Administration	SAMN03775368	GCA_001660335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/335/GCA_001660335.1_ASM166033v1	-	ESC480
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36546	65.6	-	CPEH01	68	4269	4060	3/23/15	3/12/17	Scaffold	SC	SAMEA1707217	GCA_001387855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/855/GCA_001387855.1_8939_3_36	-	2391A
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1854	39.6	-	CKXN01	64	2425	2168	3/21/15	3/10/17	Scaffold	SC	SAMEA1026137	GCA_001144405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/405/GCA_001144405.1_6823_6_3	-	SMRU1971
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.07886	39.7	-	CMCI01	58	2305	2085	3/21/15	3/11/17	Scaffold	SC	SAMEA1029328	GCA_001144445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/445/GCA_001144445.1_7004_8_79	-	SMRU2911
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36512	65.6	-	CPBO01	75	4273	4074	3/22/15	3/12/17	Scaffold	SC	SAMEA1707221	GCA_001387875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/875/GCA_001387875.1_8898_8_48	-	2326E
Escherichia coli	562	PRJNA286916	286916	Proteobacteria	Gammaproteobacteria	4.94241	50.8	-	LFID01	96	5132	4825	6/8/16	2/25/17	Contig	U.S. Food and Drug Administration	SAMN03775369	GCA_001660345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/345/GCA_001660345.1_ASM166034v1	-	ESC369
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.99813	52.1	-	MYHW01	117	5173	4897	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359717	GCA_002051625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/625/GCA_002051625.1_ASM205162v1	-	BCW_5874
Staphylococcus aureus H81800	1412746	PRJNA225164	225164	Terrabacteria group	Firmicutes	2.84107	32.7	-	JDYV01	9	2974	2817	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385486	GCA_000594045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/045/GCA_000594045.1_Stap_aure_H81800_V1	-	H81800
Staphylococcus aureus F50126	1412731	PRJNA225149	225149	Terrabacteria group	Firmicutes	2.90063	32.7	-	JDYW01	9	3061	2894	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385471	GCA_000594065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/065/GCA_000594065.1_Stap_aure_F50126_V1	-	F50126
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.96098	52.2	-	MYHU01	195	5119	4842	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359719	GCA_002051645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/645/GCA_002051645.1_ASM205164v1	-	BCW_5876
Escherichia coli	562	PRJNA322664	322664	Proteobacteria	Gammaproteobacteria	4.86717	50.6145	plasmid pICBEC72Hctx:NZ_KX443694.1/KX443694.1; plasmid pICBEC72Hmcr:NZ_CP015977.1/CP015977.1	MVDJ01	16	5038	4727	2/16/17	4/10/17	Contig	Universidade de Sao Paulo	SAMN05172242	GCA_001660545.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/660/545/GCA_001660545.3_ASM166054v3	27503650	ICBEC72H
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35934	65.6	-	CPFE01	90	4284	4060	3/23/15	3/12/17	Scaffold	SC	SAMEA1707223	GCA_001387895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/895/GCA_001387895.1_8939_3_7	-	2491J
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.07363	39.7	-	CPRP01	62	2259	2070	3/23/15	3/10/17	Scaffold	SC	SAMEA682527	GCA_001144485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/485/GCA_001144485.1_5392_7_11	-	08B02452
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.08158	39.6	-	CPTM01	78	2267	2049	3/22/15	3/10/17	Scaffold	SC	SAMEA769999	GCA_001144505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/505/GCA_001144505.1_5310_1_11	-	19F/5
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35165	65.6	-	CPBR01	88	4278	4063	3/23/15	3/12/17	Scaffold	SC	SAMEA1707226	GCA_001387915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/915/GCA_001387915.1_8898_8_49	-	1537X
Escherichia coli	562	PRJNA324653	324653	Proteobacteria	Gammaproteobacteria	5.26633	50.8	-	LZET01	119	5604	5213	6/10/16	2/25/17	Contig	Chalmers University of Technology	SAMN05212795	GCA_001661055.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/661/055/GCA_001661055.2_ASM166105v2	-	CCUG 62462
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.84357	52.1	-	MYHV01	211	4959	4684	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359718	GCA_002051655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/655/GCA_002051655.1_ASM205165v1	-	BCW_5875
Staphylococcus aureus F50076	1412728	PRJNA225146	225146	Terrabacteria group	Firmicutes	2.94384	32.8	-	JDYX01	13	3125	2956	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385468	GCA_000594085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/085/GCA_000594085.1_Stap_aure_F50076_V1	-	F50076
Staphylococcus aureus F36670	1412717	PRJNA225135	225135	Terrabacteria group	Firmicutes	2.94156	32.7	-	JDYY01	12	3124	2961	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385457	GCA_000594105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/105/GCA_000594105.1_Stap_aure_F36670_V1	-	F36670
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.88168	52.1	-	MYHY01	102	5013	4761	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359714	GCA_002051705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/705/GCA_002051705.1_ASM205170v1	-	BCW_5871
Escherichia coli	562	PRJNA299801	299801	Proteobacteria	Gammaproteobacteria	5.47368	50.2	-	LXJA02	170	6021	5425	7/1/16	2/25/17	Contig	Public Health Ontario	SAMN04229515	GCA_001677545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/545/GCA_001677545.2_ASM167754v2	-	GN1218
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35173	65.6	-	CPEA01	65	4264	4053	3/22/15	3/12/17	Scaffold	SC	SAMEA1707229	GCA_001387935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/935/GCA_001387935.1_8939_3_29	-	2433W
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12579	39.5	-	CLMJ01	59	2379	2144	3/21/15	3/11/17	Scaffold	SC	SAMEA1029130	GCA_001144545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/545/GCA_001144545.1_6938_7_22	-	SMRU2710
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.03529	39.7	-	CRHL01	70	2229	2025	3/23/15	3/11/17	Scaffold	SC	SAMEA1025501	GCA_001144565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/565/GCA_001144565.1_6736_7_24	-	SMRU1296
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37093	65.6	-	CPBW01	63	4281	4076	3/23/15	3/12/17	Scaffold	SC	SAMEA1707231	GCA_001387955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/955/GCA_001387955.1_8898_8_50	-	2177S
Escherichia coli	562	PRJNA299801	299801	Proteobacteria	Gammaproteobacteria	5.30098	50.3	-	LXIV02	105	5714	5217	7/1/16	2/25/17	Contig	Public Health Ontario	SAMN04229520	GCA_001677625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/625/GCA_001677625.2_ASM167762v2	-	GN1223
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.93205	52.1	-	MYHZ01	132	5138	4835	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359713	GCA_002051725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/725/GCA_002051725.1_ASM205172v1	-	BCW_5870
Staphylococcus aureus W92100	1412715	PRJNA225133	225133	Terrabacteria group	Firmicutes	2.90815	32.8	-	JDYZ01	15	3079	2927	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385455	GCA_000594125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/125/GCA_000594125.1_Stap_aure_W92100_V1	-	W92100
Staphylococcus aureus W92052	1412714	PRJNA225132	225132	Terrabacteria group	Firmicutes	2.88391	32.7	-	JDZA01	15	3038	2874	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385454	GCA_000594145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/145/GCA_000594145.1_Stap_aure_W92052_V1	-	W92052
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.98767	52.2	-	MYIA01	78	5146	4893	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359712	GCA_002051735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/735/GCA_002051735.1_ASM205173v1	-	BCW_5868
Escherichia coli	562	PRJNA299801	299801	Proteobacteria	Gammaproteobacteria	5.37859	50.2	-	LXJC02	137	5858	5289	7/1/16	2/25/17	Contig	Public Health Ontario	SAMN04229513	GCA_001677715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/715/GCA_001677715.2_ASM167771v2	-	GN1216
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.32118	65.6	-	CPIV01	66	4252	4045	3/23/15	3/12/17	Scaffold	SC	SAMEA1707233	GCA_001387975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/975/GCA_001387975.1_8987_5_34	-	2586M
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14737	39.5	-	CKDG01	59	2380	2147	3/21/15	3/10/17	Scaffold	SC	SAMEA1023874	GCA_001144585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/585/GCA_001144585.1_6593_5_9	-	20
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.1165	39.6	-	CMKI01	72	2340	2111	3/22/15	3/10/17	Scaffold	SC	SAMEA1029368	GCA_001144625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/625/GCA_001144625.1_7054_4_3	-	SMRU3027
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36775	65.6	-	CPFH01	82	4290	4051	3/23/15	3/12/17	Scaffold	SC	SAMEA1707234	GCA_001387995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/387/995/GCA_001387995.1_8939_3_8	-	2505Z
Escherichia coli	562	PRJNA299801	299801	Proteobacteria	Gammaproteobacteria	5.33454	50.3	-	LXIW02	140	5763	5206	7/1/16	2/25/17	Contig	Public Health Ontario	SAMN04229519	GCA_001677775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/775/GCA_001677775.2_ASM167777v2	-	GN1222
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.15597	51.9	-	MYIH01	111	5340	5064	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359703	GCA_002051785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/785/GCA_002051785.1_ASM205178v1	-	BCW_5859
Staphylococcus aureus W85326	1412713	PRJNA225131	225131	Terrabacteria group	Firmicutes	2.8837	32.7	-	JDZB01	13	3030	2872	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385453	GCA_000594165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/165/GCA_000594165.1_Stap_aure_W85326_V1	-	W85326
Staphylococcus aureus W75132	1412709	PRJNA225127	225127	Terrabacteria group	Firmicutes	2.92963	32.7	-	JDZC01	14	3090	2925	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385449	GCA_000594185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/185/GCA_000594185.1_Stap_aure_W75132_V1	-	W75132
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.22722	51.9	-	MYII01	901	5351	4960	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359702	GCA_002051825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/825/GCA_002051825.1_ASM205182v1	-	BCW_5858
Escherichia coli	562	PRJNA299801	299801	Proteobacteria	Gammaproteobacteria	5.31295	50.2	-	LXIR02	132	5763	5240	7/1/16	2/26/17	Contig	Public Health Ontario	SAMN04229524	GCA_001677785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/785/GCA_001677785.2_ASM167778v2	-	GN1227
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36266	65.6	-	CPJJ01	87	4287	4047	3/23/15	3/12/17	Scaffold	SC	SAMEA1707235	GCA_001388015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/015/GCA_001388015.1_8987_5_6	-	2531C
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.20491	39.5	-	CLUT01	89	2468	2219	3/21/15	3/10/17	Scaffold	SC	SAMEA1025697	GCA_001144685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/685/GCA_001144685.1_6983_2_4	-	SMRU2212
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.21878	39.4	-	CMFD01	80	2452	2192	3/21/15	3/10/17	Scaffold	SC	SAMEA1028688	GCA_001144705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/705/GCA_001144705.1_7011_6_15	-	SMRU2823
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35088	65.6	-	CPBC01	84	4275	4069	3/23/15	3/12/17	Scaffold	SC	SAMEA1707237	GCA_001388035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/035/GCA_001388035.1_8898_8_26	-	2171L
Escherichia coli	562	PRJNA299801	299801	Proteobacteria	Gammaproteobacteria	5.32218	50.3	-	LXJJ02	112	5748	5207	7/1/16	2/25/17	Contig	Public Health Ontario	SAMN04229506	GCA_001677795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/795/GCA_001677795.2_ASM167779v2	-	GN1209
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.86948	52.1	-	MYIL01	153	4998	4751	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359699	GCA_002051865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/865/GCA_002051865.1_ASM205186v1	-	BCW_5855
Staphylococcus aureus W64921	1412704	PRJNA225122	225122	Terrabacteria group	Firmicutes	2.91883	32.8	-	JDZD01	12	3094	2936	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385444	GCA_000594205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/205/GCA_000594205.1_Stap_aure_W64921_V1	-	W64921
Staphylococcus aureus T37849	1412697	PRJNA225115	225115	Terrabacteria group	Firmicutes	2.9354	32.8	-	JDZE01	10	3116	2953	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385437	GCA_000594225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/225/GCA_000594225.1_Stap_aure_T37849_V1	-	T37849
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70785	52.1	-	MYIM01	60	4822	4572	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359698	GCA_002051895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/895/GCA_002051895.1_ASM205189v1	-	BCW_5854
Escherichia coli	562	PRJNA299801	299801	Proteobacteria	Gammaproteobacteria	5.36188	50.2	-	LXJE02	162	5809	5254	7/1/16	2/25/17	Contig	Public Health Ontario	SAMN04229511	GCA_001677805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/805/GCA_001677805.2_ASM167780v2	-	GN1214
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3542	65.6	-	CPFV01	82	4283	4058	3/23/15	3/12/17	Scaffold	SC	SAMEA1707244	GCA_001388055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/055/GCA_001388055.1_8939_3_9	-	2338S
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.06089	39.6	-	CMSI01	51	2291	2066	3/23/15	3/11/17	Scaffold	SC	SAMEA2062392	GCA_001144745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/745/GCA_001144745.1_9803_8_69	-	23F
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.10851	39.5	-	CMGT01	61	2318	2065	3/22/15	3/10/17	Scaffold	SC	SAMEA1029387	GCA_001144885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/885/GCA_001144885.1_7038_5_11	-	SMRU2963
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37448	65.6	-	CPIU01	70	4299	4069	3/23/15	3/12/17	Scaffold	SC	SAMEA1707246	GCA_001388075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/075/GCA_001388075.1_8987_5_33	-	2585L
Escherichia coli	562	PRJNA324008	324008	Proteobacteria	Gammaproteobacteria	5.04115	50.6186	plasmid pNGF3_pCROD2_like:NZ_CM004488.1/CM004488.1; plasmid pNGF3_pCol_let_like:NZ_CM004489.1/CM004489.1	LYXW01	57	5141	4827	7/11/16	2/25/17	Contig	Harvard University	SAMN05194386	GCA_001683585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/585/GCA_001683585.1_NGF3	-	NGF3
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.73605	52.1	-	MYIN01	55	4864	4615	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359697	GCA_002051905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/905/GCA_002051905.1_ASM205190v1	-	BCW_5853
Staphylococcus aureus T30569	1412693	PRJNA225111	225111	Terrabacteria group	Firmicutes	2.90052	32.7	-	JDZF01	12	3057	2897	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385433	GCA_000594245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/245/GCA_000594245.1_Stap_aure_T30569_V1	-	T30569
Staphylococcus aureus M77202	1412682	PRJNA225099	225099	Terrabacteria group	Firmicutes	2.85195	32.8	-	JDZG01	38	2988	2831	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385422	GCA_000594265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/265/GCA_000594265.1_Stap_aure_M77202_V1	-	M77202
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.88883	52.1	-	MYIQ01	1166	5463	4574	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359694	GCA_002051945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/945/GCA_002051945.1_ASM205194v1	-	BCW_5850
Escherichia coli	562	PRJNA324008	324008	Proteobacteria	Gammaproteobacteria	5.03887	50.6181	plasmid pNGF2_pCROD2_like:NZ_CM004486.1/CM004486.1; plasmid pNGF2_pCol_let_like:NZ_CM004487.1/CM004487.1	LYXV01	48	5141	4829	7/11/16	2/25/17	Contig	Harvard University	SAMN05194385	GCA_001683595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/595/GCA_001683595.1_NGF2	-	NGF2
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36746	65.6	-	CPDY01	77	4283	4077	3/23/15	3/12/17	Scaffold	SC	SAMEA1707250	GCA_001388095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/095/GCA_001388095.1_8939_3_28	-	2390Z
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.11437	39.7	-	CRTC01	46	2257	2022	3/23/15	3/10/17	Scaffold	SC	SAMEA1025137	GCA_001144905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/905/GCA_001144905.1_6805_4_1	-	SMRU1657
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07314	39.5	-	CKHW01	39	2264	2013	3/21/15	3/15/17	Scaffold	SC	SAMEA1023807	GCA_001145165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/165/GCA_001145165.1_6631_2_9	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34556	65.6	-	CPBT01	89	4280	4068	3/22/15	3/12/17	Scaffold	SC	SAMEA1707252	GCA_001388115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/115/GCA_001388115.1_8898_8_51	-	2207A
Escherichia coli	562	PRJNA328795	328795	Proteobacteria	Gammaproteobacteria	5.29296	50.5	-	MBNU01	3	5419	5044	7/22/16	2/25/17	Contig	MIT	SAMN05381430	GCA_001692775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/775/GCA_001692775.1_ASM169277v1	-	1409150006
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.9078	52.2	-	MYIS01	124	5036	4786	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359692	GCA_002051965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/965/GCA_002051965.1_ASM205196v1	-	BCW_5848
Staphylococcus aureus M53356	1412673	PRJNA225089	225089	Terrabacteria group	Firmicutes	2.84891	32.8	-	JDZH01	13	2998	2834	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385413	GCA_000594285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/285/GCA_000594285.1_Stap_aure_M53356_V1	-	M53356
Staphylococcus aureus M49691	1412671	PRJNA225087	225087	Terrabacteria group	Firmicutes	2.92708	32.7	-	JDZI01	17	3092	2925	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385411	GCA_000594305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/305/GCA_000594305.1_Stap_aure_M49691_V1	-	M49691
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89643	52.2	-	MYIV01	88	5026	4771	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359689	GCA_002052005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/005/GCA_002052005.1_ASM205200v1	-	BCW_5845
Escherichia coli	562	PRJNA328795	328795	Proteobacteria	Gammaproteobacteria	5.00544	50.6	-	MBNY01	2	5085	4762	7/22/16	2/25/17	Contig	MIT	SAMN05381565	GCA_001692785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/785/GCA_001692785.1_ASM169278v1	-	1512290026
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3559	65.6	-	CPAY01	82	4268	4068	3/23/15	3/12/17	Scaffold	SC	SAMEA1707257	GCA_001388135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/135/GCA_001388135.1_8898_8_25	-	type strain: 1511
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.15383	39.6	-	CLGZ01	81	2390	2147	3/21/15	3/4/17	Scaffold	SC	SAMEA1025769	GCA_001145185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/185/GCA_001145185.1_6925_5_10	-	SMRU2170
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.173	39.6	-	CLMS01	59	2367	2118	3/21/15	3/4/17	Scaffold	SC	SAMEA1028842	GCA_001145245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/245/GCA_001145245.1_6938_7_5	-	SMRU2693
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34018	65.6	-	CPBV01	70	4254	4068	3/23/15	3/12/17	Scaffold	SC	SAMEA1707258	GCA_001388155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/155/GCA_001388155.1_8898_8_52	-	2236G
Escherichia coli	562	PRJNA328795	328795	Proteobacteria	Gammaproteobacteria	5.06641	50.5	-	MBNV01	4	5257	4908	7/22/16	2/25/17	Contig	MIT	SAMN05381562	GCA_001692795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/795/GCA_001692795.1_ASM169279v1	-	1409160003
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.82792	52.2	-	MYIW01	79	4938	4696	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359688	GCA_002052035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/035/GCA_002052035.1_ASM205203v1	-	BCW_5844
Staphylococcus aureus M46058	1412667	PRJNA225083	225083	Terrabacteria group	Firmicutes	2.85664	32.8	-	JDZJ01	37	2984	2840	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385407	GCA_000594325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/325/GCA_000594325.1_Stap_aure_M46058_V1	-	M46058
Staphylococcus aureus H58198	1412657	PRJNA225073	225073	Terrabacteria group	Firmicutes	2.89584	32.7	-	JDZK01	11	3051	2888	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385397	GCA_000594345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/345/GCA_000594345.1_Stap_aure_H58198_V1	-	H58198
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.91794	52.1	-	MYIX01	96	5068	4802	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359687	GCA_002052065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/065/GCA_002052065.1_ASM205206v1	-	BCW_5843
Escherichia coli	562	PRJNA328795	328795	Proteobacteria	Gammaproteobacteria	5.28966	50.5	-	MBNX01	3	5407	5032	7/22/16	2/25/17	Contig	MIT	SAMN05381564	GCA_001692805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/805/GCA_001692805.1_ASM169280v1	-	1512290008
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35405	65.6	-	CPDO01	81	4278	4058	3/23/15	3/12/17	Scaffold	SC	SAMEA1707261	GCA_001388175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/175/GCA_001388175.1_8939_3_10	-	2352H
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10981	39.7	-	CKEG01	83	2256	1969	3/21/15	3/15/17	Scaffold	SC	SAMEA1024169	GCA_001145285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/285/GCA_001145285.1_6630_2_13	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.20355	39.6	-	CPQB01	80	2447	2205	3/23/15	3/4/17	Scaffold	SC	SAMEA682583	GCA_001145325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/325/GCA_001145325.1_5390_1_9	-	spnIC100
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3509	65.6	-	CPEC01	72	4273	4063	3/23/15	3/12/17	Scaffold	SC	SAMEA1707264	GCA_001388195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/195/GCA_001388195.1_8939_3_31	-	2494M
Escherichia coli	562	PRJNA328795	328795	Proteobacteria	Gammaproteobacteria	5.31802	50.5	-	MBNW01	5	5447	5037	7/22/16	2/25/17	Contig	MIT	SAMN05381563	GCA_001692865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/692/865/GCA_001692865.1_ASM169286v1	-	1408270010
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.58836	52.3	-	MYIY01	1381	5209	4178	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359686	GCA_002052075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/075/GCA_002052075.1_ASM205207v1	-	BCW_5842
Staphylococcus aureus H58177	1412654	PRJNA225070	225070	Terrabacteria group	Firmicutes	2.89357	32.7	-	JDZL01	10	3051	2892	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385394	GCA_000594365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/365/GCA_000594365.1_Stap_aure_H58177_V1	-	H58177
Staphylococcus aureus H51158	1412652	PRJNA225068	225068	Terrabacteria group	Firmicutes	2.88801	32.7	-	JDZM01	8	3046	2884	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385392	GCA_000594385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/385/GCA_000594385.1_Stap_aure_H51158_V1	-	H51158
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.20146	51.8	-	MYIZ01	132	5432	5141	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359685	GCA_002052105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/105/GCA_002052105.1_ASM205210v1	-	BCW_5841
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.46682	50.5	-	LHAS01	291	6019	5507	7/28/16	2/25/17	Contig	FDA/CFSAN	SAMN03743659	GCA_001696245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/245/GCA_001696245.1_ASM169624v1	-	CFSAN033951
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36598	65.6	-	CPGV01	75	4290	4045	3/22/15	3/12/17	Scaffold	SC	SAMEA1707266	GCA_001388215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/215/GCA_001388215.1_8987_4_48	-	1361F
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08785	39.6	-	CLPD01	73	2279	2054	3/21/15	3/4/17	Scaffold	SC	SAMEA1029135	GCA_001145345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/345/GCA_001145345.1_6949_2_8	-	SMRU2432
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15036	39.6	-	CKIM01	68	2372	2162	3/21/15	3/4/17	Scaffold	SC	SAMEA1023748	GCA_001145365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/365/GCA_001145365.1_6631_4_16	-	13
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3689	65.6	-	CPDP01	70	4281	4066	3/23/15	3/12/17	Scaffold	SC	SAMEA1707267	GCA_001388235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/235/GCA_001388235.1_8939_3_11	-	2367Z
Escherichia coli	562	PRJNA319144	319144	Proteobacteria	Gammaproteobacteria	5.09978	50.7	-	LXWP01	112	5378	4990	7/28/16	2/25/17	Contig	University of Lodz	SAMN04880561	GCA_001696335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/335/GCA_001696335.1_ASM169633v1	-	012PP2015
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.92067	52.1	-	MYJA01	130	5058	4792	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359684	GCA_002052135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/135/GCA_002052135.1_ASM205213v1	-	BCW_5840
Staphylococcus aureus F77942	1412639	PRJNA225055	225055	Terrabacteria group	Firmicutes	2.8491	32.8	-	JDZN01	18	3004	2841	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385379	GCA_000594405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/405/GCA_000594405.1_Stap_aure_F77942_V1	-	F77942
Staphylococcus aureus F26873	1412632	PRJNA225048	225048	Terrabacteria group	Firmicutes	2.93836	32.8	-	JDZO01	14	3124	2960	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385372	GCA_000594425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/425/GCA_000594425.1_Stap_aure_F26873_V1	-	F26873
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.95003	52.1	-	MYJB01	126	5106	4844	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359683	GCA_002052145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/145/GCA_002052145.1_ASM205214v1	-	BCW_5839
Escherichia coli	562	PRJNA319144	319144	Proteobacteria	Gammaproteobacteria	4.87846	50.6	-	LXWO01	99	5118	4804	7/28/16	2/25/17	Contig	University of Lodz	SAMN04880558	GCA_001696345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/345/GCA_001696345.1_ASM169634v1	-	011PP2015
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36342	65.6	-	CPIX01	84	4274	4037	3/23/15	3/12/17	Scaffold	SC	SAMEA1707269	GCA_001388255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/255/GCA_001388255.1_8987_5_37	-	type strain: 2592
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21765	39.5	-	CPMG01	92	2464	2217	3/23/15	3/4/17	Scaffold	SC	SAMEA1408263	GCA_001145405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/405/GCA_001145405.1_7444_8_33	-	9905+21046
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10333	39.7	-	CKEF01	133	2338	2071	3/21/15	3/6/17	Scaffold	SC	SAMEA1024199	GCA_001145425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/425/GCA_001145425.1_6630_2_10	-	33B
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35649	65.6	-	CPJK01	87	4285	4058	3/23/15	3/12/17	Scaffold	SC	SAMEA1707270	GCA_001388275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/275/GCA_001388275.1_8987_5_9	-	2535G
Escherichia coli	562	PRJNA326922	326922	Proteobacteria	Gammaproteobacteria	5.24716	50.6	-	MAJK01	181	5507	5096	7/29/16	2/25/17	Contig	New Jersey Medical School-Rutgers University	SAMN05294116	GCA_001696775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/775/GCA_001696775.1_ASM169677v1	-	MCR1_NJ
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.02836	52	-	MYJC01	115	5222	4947	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359682	GCA_002052175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/175/GCA_002052175.1_ASM205217v1	-	BCW_5838
Staphylococcus aureus F23347	1412628	PRJNA225044	225044	Terrabacteria group	Firmicutes	2.93195	32.7	-	JDZP01	19	3092	2932	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385368	GCA_000594445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/445/GCA_000594445.1_Stap_aure_F23347_V1	-	F23347
Staphylococcus aureus F23336	1412627	PRJNA225043	225043	Terrabacteria group	Firmicutes	2.8291	32.7	-	JDZQ01	6	2950	2804	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385367	GCA_000594465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/465/GCA_000594465.1_Stap_aure_F23336_V1	-	F23336
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.15357	51.8	-	MYJD01	161	5347	5047	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359681	GCA_002052185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/185/GCA_002052185.1_ASM205218v1	-	BCW_5837
Escherichia coli	562	PRJNA319144	319144	Proteobacteria	Gammaproteobacteria	5.16251	50.4	-	MBPV01	99	5447	5046	8/5/16	2/25/17	Contig	University of Lodz	SAMN05377242	GCA_001700015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/015/GCA_001700015.1_ASM170001v1	-	003PP2015
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35318	65.6	-	CPEE01	82	4273	4061	3/23/15	3/12/17	Scaffold	SC	SAMEA1707271	GCA_001388295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/295/GCA_001388295.1_8939_3_32	-	2508C
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.07126	39.7	-	CPNS01	68	2267	2078	3/23/15	3/4/17	Scaffold	SC	SAMEA682331	GCA_001145445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/445/GCA_001145445.1_5381_1_4	-	09B01841
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.02414	39.7	-	CRFD01	52	2224	2007	3/23/15	3/4/17	Scaffold	SC	SAMEA1024858	GCA_001145525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/525/GCA_001145525.1_6731_6_22	-	SMRU1126
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35795	65.6	-	CPFC01	82	4287	4068	3/23/15	3/12/17	Scaffold	SC	SAMEA1707272	GCA_001388315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/315/GCA_001388315.1_8939_3_63	-	2499S
Escherichia coli	562	PRJNA319144	319144	Proteobacteria	Gammaproteobacteria	5.39202	50.4	-	MBPW01	128	5718	5324	8/5/16	2/25/17	Contig	University of Lodz	SAMN05377243	GCA_001700025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/025/GCA_001700025.1_ASM170002v1	-	004PP2015
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.85925	52.1	-	MYJF01	153	5054	4765	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359679	GCA_002052225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/225/GCA_002052225.1_ASM205222v1	-	BCW_5835
Staphylococcus aureus F20105	1412625	PRJNA225041	225041	Terrabacteria group	Firmicutes	2.94074	32.8	-	JDZR01	11	3121	2957	2/14/14	3/3/17	Contig	Broad Institute	SAMN02385365	GCA_000594485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/485/GCA_000594485.1_Stap_aure_F20105_V1	-	F20105
Staphylococcus aureus W45757	1421911	PRJNA227891	227891	Terrabacteria group	Firmicutes	2.88393	32.8	-	JFRU01	47	3038	2872	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403201	GCA_000594505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/505/GCA_000594505.1_Stap_aure_W45757_V1	-	W45757
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.93966	52.1	-	MYJH01	161	5139	4856	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359677	GCA_002052245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/245/GCA_002052245.1_ASM205224v1	-	BCW_5833
Escherichia coli	562	PRJNA319144	319144	Proteobacteria	Gammaproteobacteria	4.84212	50.7	-	MBPT01	56	5017	4755	8/5/16	2/25/17	Contig	University of Lodz	SAMN05377240	GCA_001700035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/035/GCA_001700035.1_ASM170003v1	-	001PP2015
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3665	65.6	-	CPFM01	68	4289	4075	3/23/15	3/12/17	Scaffold	SC	SAMEA1707274	GCA_001388335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/335/GCA_001388335.1_8939_3_77	-	2466G
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.04005	39.7	-	CPUF01	60	2230	2021	3/23/15	3/4/17	Scaffold	SC	SAMEA682533	GCA_001145605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/605/GCA_001145605.1_5392_7_10	-	08B01507
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.1025	39.7	-	CMUH01	141	2226	1993	3/22/15	3/10/17	Scaffold	SC	SAMEA1022926	GCA_001145625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/625/GCA_001145625.1_5737_6_11	-	154
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35933	65.6	-	CPBB01	78	4274	4061	3/23/15	3/12/17	Scaffold	SC	SAMEA1707275	GCA_001388355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/355/GCA_001388355.1_8898_8_23	-	2308K
Escherichia coli	562	PRJNA319144	319144	Proteobacteria	Gammaproteobacteria	5.15727	50.4	-	MBPU01	95	5434	5034	8/5/16	2/25/17	Contig	University of Lodz	SAMN05377241	GCA_001700045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/045/GCA_001700045.1_ASM170004v1	-	002PP2015
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.86201	52.1	-	MYJI01	72	4949	4670	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359676	GCA_002052255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/255/GCA_002052255.1_ASM205225v1	-	BCW_5832
Staphylococcus aureus W19276	1421906	PRJNA227886	227886	Terrabacteria group	Firmicutes	2.85686	32.8	-	JFRV01	44	2999	2837	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403196	GCA_000594525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/525/GCA_000594525.1_Stap_aure_W19276_V1	-	W19276
Staphylococcus aureus W12586	1421899	PRJNA227879	227879	Terrabacteria group	Firmicutes	2.9656	32.7	-	JFRW01	30	3120	2979	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403189	GCA_000594545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/545/GCA_000594545.1_Stap_aure_W12586_V1	-	W12586
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69845	52.1	-	MYJP01	1281	5345	4419	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359669	GCA_002052305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/305/GCA_002052305.1_ASM205230v1	-	BCW_5825
Escherichia coli	562	PRJNA319144	319144	Proteobacteria	Gammaproteobacteria	5.14338	50.5	-	MBPX01	110	5451	5070	8/5/16	2/25/17	Contig	University of Lodz	SAMN05379479	GCA_001700095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/095/GCA_001700095.1_ASM170009v1	-	018PP2015
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35461	65.6	-	CPED01	58	4268	4080	3/23/15	3/12/17	Scaffold	SC	SAMEA1707277	GCA_001388375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/375/GCA_001388375.1_8939_3_30	-	2482Z
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.16077	39.5	-	CLZV01	76	2421	2168	3/21/15	3/11/17	Scaffold	SC	SAMEA1028715	GCA_001145665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/665/GCA_001145665.1_6983_8_94	-	SMRU2398
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.04369	39.7	-	CIMU01	61	2236	2018	3/21/15	3/10/17	Scaffold	SC	SAMEA1024831	GCA_001145705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/705/GCA_001145705.1_6731_6_9	-	SMRU1113
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35797	65.6	-	CPIW01	75	4266	4054	3/23/15	3/12/17	Scaffold	SC	SAMEA1707280	GCA_001388395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/395/GCA_001388395.1_8987_5_36	-	2591S
Escherichia coli	562	PRJNA319144	319144	Proteobacteria	Gammaproteobacteria	5.06127	50.6	-	MBPY01	111	5368	4964	8/5/16	2/25/17	Contig	University of Lodz	SAMN05379532	GCA_001700105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/105/GCA_001700105.1_ASM170010v1	-	020PP2016
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80628	52.1	-	MYJM01	77	4923	4690	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359672	GCA_002052315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/315/GCA_002052315.1_ASM205231v1	-	BCW_5828
Staphylococcus aureus T86792	1421896	PRJNA227876	227876	Terrabacteria group	Firmicutes	2.90144	32.7	-	JFRX01	23	3060	2888	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403186	GCA_000594565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/565/GCA_000594565.1_Stap_aure_T86792_V1	-	T86792
Staphylococcus aureus T39102	1421890	PRJNA227870	227870	Terrabacteria group	Firmicutes	2.92875	32.7	-	JFRY01	18	3115	2950	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403180	GCA_000594585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/585/GCA_000594585.1_Stap_aure_T39102_V1	-	T39102
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.34047	52	-	MYJT01	1705	5680	5038	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358609	GCA_002052355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/355/GCA_002052355.1_ASM205235v1	-	BCW_5264
Escherichia coli	562	PRJNA313927	313927	Proteobacteria	Gammaproteobacteria	5.08251	50.9	-	MAUI01	37	5168	4850	8/5/16	2/25/17	Contig	Federal University of Uberlandia	SAMN05005170	GCA_001700405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/700/405/GCA_001700405.1_ASM170040v1	-	ECO37
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36324	65.6	-	CPII01	84	4288	4043	3/23/15	3/12/17	Scaffold	SC	SAMEA1707282	GCA_001388415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/415/GCA_001388415.1_8987_5_10	-	2536H
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.23292	39.4	-	CMBF01	90	2480	2209	3/21/15	3/11/17	Scaffold	SC	SAMEA1028965	GCA_001145785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/785/GCA_001145785.1_7004_6_42	-	SMRU2850
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.04513	39.7	-	CLSD01	59	2253	2040	3/21/15	3/10/17	Scaffold	SC	SAMEA1028755	GCA_001145825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/825/GCA_001145825.1_6972_3_19	-	SMRU2587
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35006	65.6	-	CHYG01	96	4275	4063	4/21/15	3/12/17	Scaffold	SC	SAMEA1707286	GCA_001388435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/435/GCA_001388435.1_8987_4_20	-	0427Q
Escherichia coli	562	PRJNA322349	322349	Proteobacteria	Gammaproteobacteria	4.46323	50.7	-	LYML01	113	4638	4323	8/11/16	2/25/17	Contig	Georgia Institute of Technology	SAMN05159063	GCA_001704035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/035/GCA_001704035.1_ASM170403v1	27487207	LCB4023
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.88764	52.2	-	MYJU01	109	5035	4776	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358607	GCA_002052375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/375/GCA_002052375.1_ASM205237v1	-	BCW_5262
Staphylococcus aureus T32092	1421888	PRJNA227868	227868	Terrabacteria group	Firmicutes	2.8611	32.7	-	JFRZ01	17	3022	2869	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403178	GCA_000594605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/605/GCA_000594605.1_Stap_aure_T32092_V1	-	T32092
Staphylococcus aureus T24515	1421886	PRJNA227866	227866	Terrabacteria group	Firmicutes	2.87908	32.7	-	JFSA01	14	3041	2878	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403176	GCA_000594625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/625/GCA_000594625.1_Stap_aure_T24515_V1	-	T24515
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.32286	51.9	-	MYJV01	1330	5619	5057	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358606	GCA_002052395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/395/GCA_002052395.1_ASM205239v1	-	BCW_5261
Escherichia coli	562	PRJNA330627	330627	Proteobacteria	Gammaproteobacteria	5.19553	50.7	-	MBSX01	160	5531	5072	8/14/16	2/25/17	Contig	QMUL	SAMN05420188	GCA_001704835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/835/GCA_001704835.1_ASM170483v1	-	EC1
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35565	65.6	-	CPGX01	76	4280	4059	3/22/15	3/12/17	Scaffold	SC	SAMEA1707287	GCA_001388455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/455/GCA_001388455.1_8987_4_41	-	0040V
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.13291	39.6	-	CLPE01	71	2374	2159	3/21/15	3/10/17	Scaffold	SC	SAMEA1029111	GCA_001145845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/845/GCA_001145845.1_6949_2_7	-	SMRU2431
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.06437	39.6	-	CKDU01	73	2250	1987	3/21/15	3/10/17	Scaffold	SC	SAMEA1023765	GCA_001145905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/905/GCA_001145905.1_6630_1_19	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35303	65.6	-	CPCX01	62	4265	4060	3/23/15	3/12/17	Scaffold	SC	SAMEA1707288	GCA_001388475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/475/GCA_001388475.1_8898_8_82	-	2185B
Escherichia coli	562	PRJNA319144	319144	Proteobacteria	Gammaproteobacteria	4.84565	50.5	-	LYWL01	72	5085	4740	8/23/16	2/25/17	Contig	University of Lodz	SAMN05187188	GCA_001709145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/145/GCA_001709145.1_ASM170914v1	-	019PP2015
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.2399	51.9	-	MYJW01	815	5510	5053	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358605	GCA_002052415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/415/GCA_002052415.1_ASM205241v1	-	BCW_5233
Staphylococcus aureus T13127	1421885	PRJNA227865	227865	Terrabacteria group	Firmicutes	2.93896	32.7	-	JFSB01	19	3119	2959	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403175	GCA_000594645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/645/GCA_000594645.1_Stap_aure_T13127_V1	-	T13127
Staphylococcus aureus T13126	1421884	PRJNA227864	227864	Terrabacteria group	Firmicutes	2.93631	32.8	-	JFSC01	36	3127	2952	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403174	GCA_000594665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/665/GCA_000594665.1_Stap_aure_T13126_V1	-	T13126
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.59827	52.1	-	MYKD01	774	5059	4356	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358598	GCA_002052505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/505/GCA_002052505.1_ASM205250v1	-	BCW_5226
Escherichia coli	562	PRJNA319144	319144	Proteobacteria	Gammaproteobacteria	5.08041	50.5	-	LYWM01	140	5343	4933	8/23/16	2/25/17	Contig	University of Lodz	SAMN05187185	GCA_001709165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/709/165/GCA_001709165.1_ASM170916v1	-	017PP2015
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34809	65.6	-	CPCP01	100	4268	4057	3/22/15	3/12/17	Scaffold	SC	SAMEA1707290	GCA_001388495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/495/GCA_001388495.1_8898_8_73	-	2053H
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.04256	39.7	-	CRDB01	61	2242	2024	3/22/15	3/14/17	Scaffold	SC	SAMEA1025083	GCA_001145925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/925/GCA_001145925.1_6731_3_3	-	SMRU1035
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.20598	39.7	-	CKHV01	157	2434	2159	3/21/15	3/10/17	Scaffold	SC	SAMEA1024046	GCA_001146005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/005/GCA_001146005.1_6631_3_12	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35291	65.6	-	CPBE01	78	4274	4060	3/23/15	3/12/17	Scaffold	SC	SAMEA1707291	GCA_001388515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/515/GCA_001388515.1_8898_8_31	-	2309L
Escherichia coli	562	PRJNA319894	319894	Proteobacteria	Gammaproteobacteria	5.26338	50.7	-	LXFJ01	211	5594	5141	8/25/16	2/25/17	Contig	University of Hyderabad	SAMN04917426	GCA_001713545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/545/GCA_001713545.1_ASM171354v1	-	NA703
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.91874	52.2	-	MYKI01	41	5055	4793	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358564	GCA_002052565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/565/GCA_002052565.1_ASM205256v1	-	BCW_5110
Staphylococcus aureus T13125	1421883	PRJNA227863	227863	Terrabacteria group	Firmicutes	2.93861	32.7	-	JFSD01	25	3128	2955	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403173	GCA_000594685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/685/GCA_000594685.1_Stap_aure_T13125_V1	-	T13125
Staphylococcus aureus M79684	1421878	PRJNA227858	227858	Terrabacteria group	Firmicutes	2.91078	32.7	-	JFSE01	22	3067	2902	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403168	GCA_000594705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/705/GCA_000594705.1_Stap_aure_M79684_V1	-	M79684
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.07243	52.1	-	MYKM01	73	5221	4963	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358560	GCA_002052615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/615/GCA_002052615.1_ASM205261v1	-	BCW_5106
Escherichia coli	562	PRJNA319883	319883	Proteobacteria	Gammaproteobacteria	5.19749	50.6	-	LXFA01	155	5526	5079	8/25/16	2/25/17	Contig	University of Hyderabad	SAMN04910092	GCA_001713555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/555/GCA_001713555.1_ASM171355v1	-	NA099
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35206	65.6	-	CPFL01	83	4280	4063	3/23/15	3/12/17	Scaffold	SC	SAMEA1707292	GCA_001388535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/535/GCA_001388535.1_8939_3_78	-	2488F
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.146	39.5	-	CPNU01	279	2323	2121	3/23/15	3/10/17	Scaffold	SC	SAMEA682521	GCA_001146105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/105/GCA_001146105.1_5392_7_8	-	spnIC434
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.0062	39.7	-	CRDW01	65	2197	1982	3/22/15	3/10/17	Scaffold	SC	SAMEA1024725	GCA_001146245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/245/GCA_001146245.1_6731_4_8	-	SMRU1064
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35249	65.6	-	CPEX01	88	4277	4063	3/23/15	3/12/17	Scaffold	SC	SAMEA1707293	GCA_001388555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/555/GCA_001388555.1_8939_3_61	-	2441E
Escherichia coli	562	PRJNA319879	319879	Proteobacteria	Gammaproteobacteria	5.14728	50.6	-	LXEZ01	115	5379	4985	8/25/16	2/25/17	Contig	University of Hyderabad	SAMN04910063	GCA_001713575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/575/GCA_001713575.1_ASM171357v1	-	NA086
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.50658	52.1	-	MYKK01	33	4586	4245	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358562	GCA_002052625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/625/GCA_002052625.1_ASM205262v1	-	BCW_5108
Staphylococcus aureus H84958	1421865	PRJNA227845	227845	Terrabacteria group	Firmicutes	2.86663	32.7	-	JFSF01	20	3026	2870	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403155	GCA_000594725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/725/GCA_000594725.1_Stap_aure_H84958_V1	-	H84958
Staphylococcus aureus H84956	1421864	PRJNA227844	227844	Terrabacteria group	Firmicutes	2.86961	32.7	-	JFSG01	17	3030	2874	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403154	GCA_000594745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/745/GCA_000594745.1_Stap_aure_H84956_V1	-	H84956
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.48628	52.2	-	MYKL01	37	4499	4274	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358561	GCA_002052635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/635/GCA_002052635.1_ASM205263v1	-	BCW_5107
Escherichia coli	562	PRJNA319615	319615	Proteobacteria	Gammaproteobacteria	5.147	50.6	-	LWTZ01	109	5369	4983	8/25/16	2/25/17	Contig	University of Hyderabad	SAMN04901707	GCA_001713585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/585/GCA_001713585.1_ASM171358v1	-	NA084
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35295	65.6	-	CPGF01	97	4290	4067	3/22/15	3/12/17	Scaffold	SC	SAMEA1707298	GCA_001388575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/575/GCA_001388575.1_8987_4_21	-	0495P
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.01909	39.7	-	CKCU01	38	2224	1987	3/21/15	3/10/17	Scaffold	SC	SAMEA1023933	GCA_001146265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/265/GCA_001146265.1_6593_5_20	-	28F
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07924	39.6	-	CROV01	59	2266	2026	3/23/15	3/11/17	Scaffold	SC	SAMEA1025252	GCA_001146285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/285/GCA_001146285.1_6755_6_16	-	SMRU1193
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36681	65.6	-	CPFB01	83	4287	4056	3/23/15	3/12/17	Scaffold	SC	SAMEA1707299	GCA_001388595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/595/GCA_001388595.1_8939_3_62	-	2486D
Escherichia coli	562	PRJNA320147	320147	Proteobacteria	Gammaproteobacteria	5.42444	50.6	-	LXFK01	166	5696	5237	8/25/16	2/25/17	Contig	University of Hyderabad	SAMN04917438	GCA_001713625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/713/625/GCA_001713625.1_ASM171362v1	-	NA724
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.03604	52.1	-	MYIE01	147	5268	4955	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359707	GCA_002052675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/675/GCA_002052675.1_ASM205267v1	-	BCW_5863
Staphylococcus aureus H75430	1421863	PRJNA227843	227843	Terrabacteria group	Firmicutes	2.89644	32.7	-	JFSH01	19	3059	2897	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403153	GCA_000594765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/765/GCA_000594765.1_Stap_aure_H75430_V1	-	H75430
Staphylococcus aureus H72152	1421861	PRJNA227841	227841	Terrabacteria group	Firmicutes	2.93113	32.7	-	JFSI01	14	3104	2952	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403151	GCA_000594785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/785/GCA_000594785.1_Stap_aure_H72152_V1	-	H72152
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.9252	52.1	-	MYIC01	985	5552	4767	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359710	GCA_002052685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/685/GCA_002052685.1_ASM205268v1	-	BCW_5866
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.54225	50.3	-	LYVB01	388	6131	5611	9/15/16	2/25/17	Contig	US Food and Drug Administration	SAMN04191551	GCA_001728785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/785/GCA_001728785.1_ASM172878v1	-	FRIK2069
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36111	65.6	-	CPCM01	69	4263	4064	3/23/15	3/12/17	Scaffold	SC	SAMEA1707302	GCA_001388615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/615/GCA_001388615.1_8898_8_74	-	2182Y
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.1052	39.6	-	CMCO01	59	2300	2084	3/21/15	3/11/17	Scaffold	SC	SAMEA1029298	GCA_001146385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/385/GCA_001146385.1_7004_8_82	-	SMRU2914
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.0419	39.8	-	CPMP01	98	2225	1977	3/23/15	3/10/17	Scaffold	SC	SAMEA1020459	GCA_001146405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/405/GCA_001146405.1_6259_1_4	-	SN26569
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37646	65.6	-	CPBD01	85	4283	4091	3/23/15	3/12/17	Scaffold	SC	SAMEA1707305	GCA_001388635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/635/GCA_001388635.1_8898_8_28	-	2225V
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.38661	50.3	-	LYVC01	289	5837	5374	9/19/16	2/25/17	Contig	US Food and Drug Administration	SAMN04942844	GCA_001730745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/730/745/GCA_001730745.1_ASM173074v1	-	KCJ101
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.96039	52.1	-	MYIJ01	144	5158	4880	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359701	GCA_002052745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/745/GCA_002052745.1_ASM205274v1	-	BCW_5857
Staphylococcus aureus H71778	1421859	PRJNA227839	227839	Terrabacteria group	Firmicutes	2.86259	32.7	-	JFSJ01	15	3018	2865	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403149	GCA_000594805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/805/GCA_000594805.1_Stap_aure_H71778_V1	-	H71778
Staphylococcus aureus H65853	1421851	PRJNA227831	227831	Terrabacteria group	Firmicutes	2.93343	32.7	-	JFSK01	22	3119	2951	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403141	GCA_000594825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/825/GCA_000594825.1_Stap_aure_H65853_V1	-	H65853
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.90069	52.2	-	MYIP01	99	5041	4786	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359695	GCA_002052775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/775/GCA_002052775.1_ASM205277v1	-	BCW_5851
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	4.89369	50.3	-	LZDX01	125	5216	4862	9/23/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN05200888	GCA_001742475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/475/GCA_001742475.1_ASM174247v1	-	EPEC 720
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36035	65.6	-	CHCN01	89	4291	4070	4/21/15	3/12/17	Scaffold	SC	SAMEA1707307	GCA_001388655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/655/GCA_001388655.1_8939_3_80	-	2516L
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11438	39.7	-	CMIB01	71	2322	2126	3/23/15	3/10/17	Scaffold	SC	SAMEA1029333	GCA_001146425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/425/GCA_001146425.1_7038_6_2	-	SMRU2978
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.11557	39.6	-	CLTN01	64	2347	2111	3/21/15	3/10/17	Scaffold	SC	SAMEA1028600	GCA_001146505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/505/GCA_001146505.1_6972_5_10	-	SMRU2626
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36596	65.6	-	CPGW01	68	4280	4079	3/22/15	3/12/17	Scaffold	SC	SAMEA1707308	GCA_001388675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/675/GCA_001388675.1_8987_4_44	-	0439D
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	4.88012	50.4	-	LZDU01	141	5187	4836	9/23/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN05200885	GCA_001742495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/495/GCA_001742495.1_ASM174249v1	-	EPEC 400
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.85809	52.2	-	MYIT01	128	4998	4746	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359691	GCA_002052805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/805/GCA_002052805.1_ASM205280v1	-	BCW_5847
Staphylococcus aureus H31085	1421848	PRJNA227828	227828	Terrabacteria group	Firmicutes	2.86489	32.7	-	JFSL01	23	3001	2874	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403138	GCA_000594845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/845/GCA_000594845.1_Stap_aure_H31085_V1	-	H31085
Staphylococcus aureus F64897	1421843	PRJNA227823	227823	Terrabacteria group	Firmicutes	2.86626	32.7	-	JFSM01	22	3033	2874	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403133	GCA_000594865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/865/GCA_000594865.1_Stap_aure_F64897_V1	-	F64897
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.86507	52.2	-	MYJG01	86	4992	4724	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359678	GCA_002052825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/825/GCA_002052825.1_ASM205282v1	-	BCW_5834
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	4.92967	50.4	-	LZEA01	167	5282	4907	9/23/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN05200891	GCA_001742565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/565/GCA_001742565.1_ASM174256v1	-	EPEC 2669
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34902	65.6	-	CPCQ01	87	4268	4068	3/22/15	3/12/17	Scaffold	SC	SAMEA1707310	GCA_001388695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/695/GCA_001388695.1_8898_8_75	-	2211E
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.09547	39.7	-	CLJD01	58	2328	2097	3/21/15	3/10/17	Scaffold	SC	SAMEA1028617	GCA_001146565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/565/GCA_001146565.1_6925_7_9	-	SMRU2505
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.07298	39.6	-	CLHS01	55	2278	2059	3/21/15	3/4/17	Scaffold	SC	SAMEA1025976	GCA_001146685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/685/GCA_001146685.1_6925_5_7	-	19F
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35189	65.6	-	CPEZ01	69	4259	4060	3/23/15	3/12/17	Scaffold	SC	SAMEA1707312	GCA_001388715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/715/GCA_001388715.1_8939_3_59	-	2376J
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	4.90331	50.6	-	LZED01	145	5220	4826	9/23/16	2/25/17	Contig	"University of Groningen, University Medical Center Groningen"	SAMN05200894	GCA_001742645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/645/GCA_001742645.1_ASM174264v1	-	EPEC 1554
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.76399	52.2	-	MYJK01	82	4847	4591	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359674	GCA_002052855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/855/GCA_002052855.1_ASM205285v1	-	BCW_5830
Staphylococcus aureus F45779	1421839	PRJNA227819	227819	Terrabacteria group	Firmicutes	2.88884	32.7	-	JFSN01	20	3052	2886	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403129	GCA_000594885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/885/GCA_000594885.1_Stap_aure_F45779_V1	-	F45779
Staphylococcus aureus F36091	1421836	PRJNA227816	227816	Terrabacteria group	Firmicutes	2.93748	32.8	-	JFSO01	24	3124	2945	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403126	GCA_000594905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/905/GCA_000594905.1_Stap_aure_F36091_V1	-	F36091
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.547	52.2	-	MYJN01	54	4562	4314	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359671	GCA_002052895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/895/GCA_002052895.1_ASM205289v1	-	BCW_5827
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	5.15688	50.6	-	MIVM01	179	5399	5067	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729276	GCA_001748525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/525/GCA_001748525.1_ASM174852v1	-	VL2832
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36098	65.6	-	CPAX01	63	4263	4071	3/23/15	3/12/17	Scaffold	SC	SAMEA1707313	GCA_001388735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/735/GCA_001388735.1_8898_8_27	-	type strain: 2201
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09184	39.7	-	CKTD01	42	2310	2065	3/21/15	3/4/17	Scaffold	SC	SAMEA1025740	GCA_001146705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/705/GCA_001146705.1_6823_1_12	-	SMRU1860
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.17783	39.5	-	CKZU01	68	2434	2192	3/21/15	3/4/17	Scaffold	SC	SAMEA1026126	GCA_001146805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/805/GCA_001146805.1_6840_3_12	-	SMRU1812
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36639	65.6	-	CPGD01	82	4287	4045	3/22/15	3/12/17	Scaffold	SC	SAMEA1707315	GCA_001388755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/755/GCA_001388755.1_8987_4_19	-	0283J
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.89418	50.6	-	MIVN01	118	5023	4721	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729277	GCA_001748535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/535/GCA_001748535.1_ASM174853v1	-	VL2871
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.91842	52.1	-	MYJO01	1277	5611	4672	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359670	GCA_002052905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/905/GCA_002052905.1_ASM205290v1	-	BCW_5826
Staphylococcus aureus DAR133	1422389	PRJNA228479	228479	Terrabacteria group	Firmicutes	2.84805	32.8	-	JFOO01	78	2979	2811	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403939	GCA_000594925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/925/GCA_000594925.1_Stap_aure_DAR133_V1	-	DAR133
Staphylococcus aureus DAR126	1422388	PRJNA228478	228478	Terrabacteria group	Firmicutes	2.87101	32.8	-	JFOP01	35	3021	2859	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403938	GCA_000594945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/945/GCA_000594945.1_Stap_aure_DAR126_V1	-	DAR126
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.68544	52.2	-	MYJR01	959	5232	4430	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03359667	GCA_002052925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/925/GCA_002052925.1_ASM205292v1	-	BCW_5823
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.80599	50.5	-	MIVK01	110	4960	4649	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729274	GCA_001748545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/545/GCA_001748545.1_ASM174854v1	-	VL2790
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34917	65.6	-	CPCO01	88	4265	4056	3/23/15	3/12/17	Scaffold	SC	SAMEA1707316	GCA_001388775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/775/GCA_001388775.1_8898_8_76	-	2243P
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07594	39.6	-	CQZU01	50	2260	2027	3/23/15	3/4/17	Scaffold	SC	SAMEA1024903	GCA_001146965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/965/GCA_001146965.1_6730_5_6	-	SMRU654
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21741	39.6	-	CPTD01	86	2459	2205	3/23/15	3/4/17	Scaffold	SC	SAMEA1408209	GCA_001147005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/005/GCA_001147005.1_7444_8_84	-	0502+25231
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35262	65.6	-	CPFN01	81	4283	4053	3/23/15	3/12/17	Scaffold	SC	SAMEA1707317	GCA_001388795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/795/GCA_001388795.1_8939_3_81	-	2348D
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.99944	50.7	-	MIVJ01	255	5250	4852	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729273	GCA_001748555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/555/GCA_001748555.1_ASM174855v1	-	VL2783
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.82118	52.1	-	MYKA01	307	5021	4628	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358601	GCA_002052965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/965/GCA_002052965.1_ASM205296v1	-	BCW_5229
Staphylococcus aureus DAR116	1422387	PRJNA228477	228477	Terrabacteria group	Firmicutes	2.90155	32.8	-	JFOQ01	78	3077	2878	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403937	GCA_000594965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/965/GCA_000594965.1_Stap_aure_DAR116_V1	-	DAR116
Staphylococcus aureus DAR104	1422386	PRJNA228476	228476	Terrabacteria group	Firmicutes	2.77786	32.7	-	JFOR01	49	2919	2744	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403936	GCA_000594985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/594/985/GCA_000594985.1_Stap_aure_DAR104_V1	-	DAR104
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.54362	52.1	-	MYKC01	230	4687	4324	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358599	GCA_002052995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/995/GCA_002052995.1_ASM205299v1	-	BCW_5227
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.7943	50.8	-	MIVL01	142	4949	4642	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729275	GCA_001748605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/605/GCA_001748605.1_ASM174860v1	-	VL2810
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35281	65.6	-	CPGZ01	80	4274	4056	3/23/15	3/12/17	Scaffold	SC	SAMEA1707318	GCA_001388815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/815/GCA_001388815.1_8987_4_42	-	0087W
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.13517	39.7	-	CMWQ01	84	2304	1987	3/23/15	3/9/17	Scaffold	SC	SAMEA1022940	GCA_001147065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/065/GCA_001147065.1_6406_5_3	-	406
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.1149	39.6	-	CMBT01	53	2357	2132	3/21/15	3/4/17	Scaffold	SC	SAMEA1029411	GCA_001147105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/105/GCA_001147105.1_7004_7_54	-	SMRU2886
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35743	65.6	-	CPCS01	85	4291	4056	3/23/15	3/12/17	Scaffold	SC	SAMEA1707323	GCA_001388835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/835/GCA_001388835.1_8898_8_77	-	2275Z
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.99106	50.6	-	MIVO01	130	5226	4909	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729278	GCA_001748615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/615/GCA_001748615.1_ASM174861v1	-	VL2984
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83883	52.1	-	MYKN01	75	4936	4685	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358559	GCA_002053045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/045/GCA_002053045.1_ASM205304v1	-	BCW_5105
Staphylococcus aureus DAR26	1422385	PRJNA228475	228475	Terrabacteria group	Firmicutes	2.74863	32.8	-	JFOS01	37	2817	2686	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403935	GCA_000595005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/005/GCA_000595005.1_Stap_aure_DAR26_V1	-	DAR26
Staphylococcus aureus DAR5789	1422384	PRJNA228474	228474	Terrabacteria group	Firmicutes	2.84674	32.7	-	JFOT01	91	2988	2824	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403934	GCA_000595025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/025/GCA_000595025.1_Stap_aure_DAR5789_V1	-	DAR5789
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.79181	52.1	-	MYKJ01	77	4914	4668	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358563	GCA_002053075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/075/GCA_002053075.1_ASM205307v1	-	BCW_5109
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.80128	50.5	-	MIVQ01	102	4961	4641	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729280	GCA_001748625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/625/GCA_001748625.1_ASM174862v1	-	VL3009
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35489	65.6	-	CPFO01	89	4284	4051	3/23/15	3/12/17	Scaffold	SC	SAMEA1707327	GCA_001388855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/855/GCA_001388855.1_8939_3_83	-	2381P
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.21828	39.7	-	CKQM01	76	2433	2206	3/21/15	3/4/17	Scaffold	SC	SAMEA1024797	GCA_001147125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/125/GCA_001147125.1_6680_6_18	-	SMRU954
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.07209	39.8	-	CMOU01	39	2305	2072	3/23/15	3/10/17	Scaffold	SC	SAMEA2061714	GCA_001147185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/185/GCA_001147185.1_9803_7_44	-	34
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34733	65.6	-	CPEY01	82	4271	4056	3/23/15	3/12/17	Scaffold	SC	SAMEA1707329	GCA_001388875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/875/GCA_001388875.1_8939_3_57	-	2344Z
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.90053	50.6	-	MIVR01	114	5091	4794	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729281	GCA_001748635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/635/GCA_001748635.1_ASM174863v1	-	VL3013-1
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.10274	51.8	-	MYKO01	861	5161	4798	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358558	GCA_002053085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/085/GCA_002053085.1_ASM205308v1	-	BCW_5104
Staphylococcus aureus DAR5790	1422383	PRJNA228473	228473	Terrabacteria group	Firmicutes	2.89342	32.8	-	JFOU01	64	3035	2876	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403933	GCA_000595045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/045/GCA_000595045.1_Stap_aure_DAR5790_V1	-	DAR5790
Staphylococcus aureus DAR5791	1422382	PRJNA228472	228472	Terrabacteria group	Firmicutes	2.89057	32.8	-	JFOV01	64	3055	2877	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403932	GCA_000595065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/065/GCA_000595065.1_Stap_aure_DAR5791_V1	-	DAR5791
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83524	52	-	MYKP01	721	4826	4522	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358557	GCA_002053095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/095/GCA_002053095.1_ASM205309v1	-	BCW_5103
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.80227	50.7	-	MIVT01	110	4922	4654	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729283	GCA_001748685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/685/GCA_001748685.1_ASM174868v1	-	AF83
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35889	65.6	-	CPCT01	71	4285	4048	3/23/15	3/12/17	Scaffold	SC	SAMEA1707330	GCA_001388895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/895/GCA_001388895.1_8898_8_78	-	2296X
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.22528	39.6	-	CMEX01	59	2455	2230	3/21/15	3/10/17	Scaffold	SC	SAMEA1028704	GCA_001147265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/265/GCA_001147265.1_7011_5_3	-	SMRU2787
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21668	39.5	-	CPQS01	98	2453	2209	3/23/15	3/10/17	Scaffold	SC	SAMEA1408296	GCA_001147285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/285/GCA_001147285.1_7444_8_29	-	9811+05053
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36153	65.6	-	CPGJ01	68	4269	4071	3/22/15	3/12/17	Scaffold	SC	SAMEA1707332	GCA_001388915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/915/GCA_001388915.1_8987_4_25	-	0023B
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.8898	50.5	-	MIVU01	102	5042	4750	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729284	GCA_001748695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/695/GCA_001748695.1_ASM174869v1	-	AF84
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.97497	51.9	-	MYKU01	319	5125	4814	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358552	GCA_002053175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/175/GCA_002053175.1_ASM205317v1	-	BCW_5098
Staphylococcus aureus DAR5792	1422381	PRJNA228471	228471	Terrabacteria group	Firmicutes	2.84406	32.8	-	JFOW01	64	2971	2810	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403931	GCA_000595085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/085/GCA_000595085.1_Stap_aure_DAR5792_V1	-	DAR5792
Staphylococcus aureus DAR5793	1422380	PRJNA228470	228470	Terrabacteria group	Firmicutes	2.88992	32.8	-	JFOX01	63	3033	2874	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403930	GCA_000595105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/105/GCA_000595105.1_Stap_aure_DAR5793_V1	-	DAR5793
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.11447	51.8	-	MYKV01	963	5370	4871	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358551	GCA_002053215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/215/GCA_002053215.1_ASM205321v1	-	BCW_5097
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	5.40709	50.5	-	MIVS01	111	5571	5229	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729282	GCA_001748715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/715/GCA_001748715.1_ASM174871v1	-	VL3013-4
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35075	65.6	-	CPFR01	92	4275	4056	3/23/15	3/12/17	Scaffold	SC	SAMEA1707334	GCA_001388935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/935/GCA_001388935.1_8939_3_84	-	2403N
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.01712	39.7	-	CPRK01	86	2160	1958	3/22/15	3/10/17	Scaffold	SC	SAMEA770007	GCA_001147325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/325/GCA_001147325.1_5192_8_11	-	22A/2
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.06348	39.5	-	CMCD01	63	2296	2064	3/21/15	3/10/17	Scaffold	SC	SAMEA1029441	GCA_001147345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/345/GCA_001147345.1_7004_8_75	-	SMRU2907
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37179	65.6	-	CPCR01	90	4295	4059	3/23/15	3/12/17	Scaffold	SC	SAMEA1707335	GCA_001388955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/955/GCA_001388955.1_8898_8_79	-	type strain: 2316
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	5.13858	50.5	-	MIVP01	124	5281	4951	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729279	GCA_001748735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/735/GCA_001748735.1_ASM174873v1	-	VL3001
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.26748	51.7	-	MYKW01	1500	5518	4953	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358550	GCA_002053225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/225/GCA_002053225.1_ASM205322v1	-	BCW_5096
Staphylococcus aureus DAR5794	1422379	PRJNA228469	228469	Terrabacteria group	Firmicutes	2.8892	32.8	-	JFOY01	68	3055	2871	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403929	GCA_000595125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/125/GCA_000595125.1_Stap_aure_DAR5794_V1	-	DAR5794
Staphylococcus aureus DAR5795	1422378	PRJNA228468	228468	Terrabacteria group	Firmicutes	2.88722	32.8	-	JFOZ01	64	3027	2865	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403928	GCA_000595145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/145/GCA_000595145.1_Stap_aure_DAR5795_V1	-	DAR5795
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.38955	51.9	-	MYLB01	1979	5644	4969	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358545	GCA_002053295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/295/GCA_002053295.1_ASM205329v1	-	BCW_5091
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	5.3057	50.6	-	MIVV01	109	5457	5167	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729285	GCA_001748765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/765/GCA_001748765.1_ASM174876v1	-	AF85
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35739	65.6	-	CPFP01	84	4283	4063	3/23/15	3/12/17	Scaffold	SC	SAMEA1707337	GCA_001388975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/975/GCA_001388975.1_8939_3_85	-	2467H
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.06805	39.7	-	CMPC01	61	2298	2082	3/23/15	3/10/17	Scaffold	SC	SAMEA2061502	GCA_001147445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/445/GCA_001147445.1_9803_7_51	-	32F
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14212	39.7	-	CJZV01	95	2279	2044	3/21/15	3/10/17	Scaffold	SC	SAMEA974645	GCA_001147465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/465/GCA_001147465.1_6259_5_24	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39011	65.6	-	CPCV01	94	4297	4095	3/23/15	3/12/17	Scaffold	SC	SAMEA1707338	GCA_001388995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/388/995/GCA_001388995.1_8898_8_80	-	2334N
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.95822	50.6	-	MIWB01	138	5117	4837	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729291	GCA_001748805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/805/GCA_001748805.1_ASM174880v1	-	AF7504-1
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.2094	51.5	-	MYKZ01	375	5427	4912	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358547	GCA_002053305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/305/GCA_002053305.1_ASM205330v1	-	BCW_5093
Staphylococcus aureus DAR5796	1422377	PRJNA228467	228467	Terrabacteria group	Firmicutes	2.89237	32.8	-	JFPA01	61	3032	2873	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403927	GCA_000595165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/165/GCA_000595165.1_Stap_aure_DAR5796_V1	-	DAR5796
Staphylococcus aureus DAR5797	1422376	PRJNA228466	228466	Terrabacteria group	Firmicutes	2.89045	32.8	-	JFPB01	60	3031	2871	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403926	GCA_000595185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/185/GCA_000595185.1_Stap_aure_DAR5797_V1	-	DAR5797
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.94387	51.9	-	MYLD01	549	5009	4691	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358543	GCA_002053325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/325/GCA_002053325.1_ASM205332v1	-	BCW_5089
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.9221	50.6	-	MIVY01	123	5057	4761	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729288	GCA_001748815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/815/GCA_001748815.1_ASM174881v1	-	AF97
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36949	65.6	-	CPGT01	71	4278	4083	3/22/15	3/12/17	Scaffold	SC	SAMEA1707339	GCA_001389015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/015/GCA_001389015.1_8987_4_39	-	0663X
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08083	39.6	-	CRFC01	58	2275	2054	3/23/15	3/10/17	Scaffold	SC	SAMEA1024708	GCA_001147565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/565/GCA_001147565.1_6731_6_4	-	SMRU1108
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.14209	39.7	-	CMUS01	141	2258	1991	3/23/15	3/11/17	Scaffold	SC	SAMEA1022878	GCA_001147605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/605/GCA_001147605.1_5737_7_6	-	165
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38345	65.6	-	CPGG01	90	4300	4096	3/23/15	3/12/17	Scaffold	SC	SAMEA1707340	GCA_001389035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/035/GCA_001389035.1_8987_4_22	-	0604H
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.93637	50.5	-	MIVX01	181	5097	4818	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729287	GCA_001748825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/825/GCA_001748825.1_ASM174882v1	-	AF94
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.54497	52.1	-	MYLE01	370	4549	4199	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358542	GCA_002053335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/335/GCA_002053335.1_ASM205333v1	-	BCW_5088
Staphylococcus aureus DAR5798	1422375	PRJNA228465	228465	Terrabacteria group	Firmicutes	2.81406	32.7	-	JFPC01	85	2936	2791	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403925	GCA_000595205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/205/GCA_000595205.1_Stap_aure_DAR5798_V1	-	DAR5798
Staphylococcus aureus DAR5799	1422374	PRJNA228464	228464	Terrabacteria group	Firmicutes	2.89154	32.8	-	JFPD01	64	3054	2871	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403924	GCA_000595225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/225/GCA_000595225.1_Stap_aure_DAR5799_V1	-	DAR5799
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89566	52	-	MYLF01	357	4920	4643	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358541	GCA_002053375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/375/GCA_002053375.1_ASM205337v1	-	BCW_5087
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.91003	50.6	-	MIWA01	131	5111	4797	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729290	GCA_001748835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/835/GCA_001748835.1_ASM174883v1	-	AF7407
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3407	65.6	-	CPBF01	79	4245	4061	3/22/15	3/12/17	Scaffold	SC	SAMEA1707342	GCA_001389055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/055/GCA_001389055.1_8898_8_32	-	2324C
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.18261	39.6	-	CQXF01	45	2429	2186	3/23/15	3/10/17	Scaffold	SC	SAMEA1025043	GCA_001147625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/625/GCA_001147625.1_6730_1_14	-	SMRU590
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.04997	39.6	-	CMAZ01	44	2274	2059	3/21/15	3/10/17	Scaffold	SC	SAMEA1029052	GCA_001147645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/645/GCA_001147645.1_7004_6_35	-	SMRU2843
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3487	65.6	-	CPCW01	90	4281	4062	3/23/15	3/12/17	Scaffold	SC	SAMEA1707346	GCA_001389075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/075/GCA_001389075.1_8898_8_81	-	2068Z
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	5.05507	50.7	-	MIWC01	143	5269	4939	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729293	GCA_001748885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/885/GCA_001748885.1_ASM174888v1	-	AF7658-2
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.88528	51.9	-	MYLJ01	801	4936	4642	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358534	GCA_002053395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/395/GCA_002053395.1_ASM205339v1	-	BCW_5067
Staphylococcus aureus DAR5800	1422373	PRJNA228463	228463	Terrabacteria group	Firmicutes	2.892	32.8	-	JFPE01	62	3029	2871	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403923	GCA_000595245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/245/GCA_000595245.1_Stap_aure_DAR5800_V1	-	DAR5800
Staphylococcus aureus DAR5801	1422372	PRJNA228462	228462	Terrabacteria group	Firmicutes	2.89251	32.8	-	JFPF01	53	3035	2875	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403922	GCA_000595265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/265/GCA_000595265.1_Stap_aure_DAR5801_V1	-	DAR5801
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.99626	52	-	MYLI01	934	5007	4741	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358538	GCA_002053405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/405/GCA_002053405.1_ASM205340v1	-	BCW_5071
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	5.3531	50.6	-	MIWD01	279	5750	5279	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729294	GCA_001748895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/895/GCA_001748895.1_ASM174889v1	-	AF7658-3
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37268	65.6	-	CPHM01	88	4295	4046	3/22/15	3/12/17	Scaffold	SC	SAMEA1707348	GCA_001389095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/095/GCA_001389095.1_8987_4_67	-	type strain: 0338
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15915	39.5	-	CKBC01	64	2405	2161	3/21/15	3/10/17	Scaffold	SC	SAMEA974697	GCA_001147665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/665/GCA_001147665.1_6259_7_2	-	6C
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.1045	39.6	-	CRID01	70	2327	2103	3/22/15	3/10/17	Scaffold	SC	SAMEA1025387	GCA_001147725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/725/GCA_001147725.1_6736_8_6	-	SMRU1302
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34936	65.6	-	CPCU01	83	4278	4061	3/23/15	3/12/17	Scaffold	SC	SAMEA1707351	GCA_001389115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/115/GCA_001389115.1_8898_8_8	-	2319X
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.98349	50.6	-	MIWE01	114	5193	4887	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729295	GCA_001748905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/905/GCA_001748905.1_ASM174890v1	-	AF7709
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.3789	52	-	MYLG01	477	5559	5163	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358540	GCA_002053415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/415/GCA_002053415.1_ASM205341v1	-	BCW_5086
Staphylococcus aureus DAR5802	1422371	PRJNA228461	228461	Terrabacteria group	Firmicutes	2.88834	32.7	-	JFPG01	57	3037	2865	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403921	GCA_000595285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/285/GCA_000595285.1_Stap_aure_DAR5802_V1	-	DAR5802
Staphylococcus aureus DAR5803	1422370	PRJNA228460	228460	Terrabacteria group	Firmicutes	2.89601	32.8	-	JFPH01	69	3057	2879	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403920	GCA_000595305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/305/GCA_000595305.1_Stap_aure_DAR5803_V1	-	DAR5803
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.17781	51.9	-	MYLL01	438	5415	5001	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358530	GCA_002053475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/475/GCA_002053475.1_ASM205347v1	-	BCW_5053
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	5.23763	50.5	-	MIWF01	185	5542	5132	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729296	GCA_001748915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/915/GCA_001748915.1_ASM174891v1	-	AF7759-1
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38293	65.6	-	CPFG01	73	4291	4084	3/23/15	3/12/17	Scaffold	SC	SAMEA1707352	GCA_001389135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/135/GCA_001389135.1_8939_3_74	-	2363V
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08929	39.6	-	CQWL01	130	2286	2068	3/22/15	3/10/17	Scaffold	SC	SAMEA1024702	GCA_001147845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/845/GCA_001147845.1_6714_7_14	-	SMRU758
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.09303	39.7	-	CLYU01	63	2303	2090	3/21/15	3/11/17	Scaffold	SC	SAMEA1029160	GCA_001147905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/905/GCA_001147905.1_6983_7_66	-	SMRU2370
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35851	65.6	-	CPDE01	77	4285	4061	3/23/15	3/12/17	Scaffold	SC	SAMEA1707355	GCA_001389155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/155/GCA_001389155.1_8898_8_9	-	1492Y
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	5.18605	50.1	-	MIVZ01	419	5479	5089	9/29/16	5/22/17	Contig	Heriot-Watt University	SAMN05729289	GCA_001748965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/965/GCA_001748965.1_ASM174896v1	-	AF103
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.94757	51.9	-	MYLM01	674	4944	4689	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358529	GCA_002053485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/485/GCA_002053485.1_ASM205348v1	-	BCW_5052
Staphylococcus aureus DAR5804	1422369	PRJNA228459	228459	Terrabacteria group	Firmicutes	2.88669	32.8	-	JFPI01	69	3036	2865	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403919	GCA_000595325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/325/GCA_000595325.1_Stap_aure_DAR5804_V1	-	DAR5804
Staphylococcus aureus DAR5805	1422368	PRJNA228458	228458	Terrabacteria group	Firmicutes	2.92007	32.7	-	JFPJ01	76	3071	2907	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403918	GCA_000595345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/345/GCA_000595345.1_Stap_aure_DAR5805_V1	-	DAR5805
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.87172	52.1	-	MYLR01	254	4968	4673	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358524	GCA_002053495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/495/GCA_002053495.1_ASM205349v1	-	BCW_5047
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.96963	50.6	-	MIVW01	154	5140	4847	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729286	GCA_001748975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/975/GCA_001748975.1_ASM174897v1	-	AF90
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35839	65.6	-	CHYI01	90	4281	4054	4/21/15	3/12/17	Scaffold	SC	SAMEA1707358	GCA_001389175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/175/GCA_001389175.1_8987_4_68	-	0462D
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10659	39.6	-	CQWI01	122	2296	2081	3/23/15	3/10/17	Scaffold	SC	SAMEA1024609	GCA_001147925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/925/GCA_001147925.1_6714_7_17	-	SMRU761
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.14893	39.5	-	CLLB01	100	2384	2139	3/21/15	3/10/17	Scaffold	SC	SAMEA1028995	GCA_001147945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/945/GCA_001147945.1_6938_5_12	-	SMRU2652
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35808	65.6	-	CPFZ01	90	4280	4055	3/22/15	3/12/17	Scaffold	SC	SAMEA1707359	GCA_001389195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/195/GCA_001389195.1_8987_4_13	-	0481Z
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.82675	50.8	-	MIWG01	119	4938	4676	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729297	GCA_001748985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/985/GCA_001748985.1_ASM174898v1	-	AF7761
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.28578	51.7	-	MYLS01	771	5419	5005	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358521	GCA_002053505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/505/GCA_002053505.1_ASM205350v1	-	BCW_5043
Staphylococcus aureus DAR5806	1422367	PRJNA228457	228457	Terrabacteria group	Firmicutes	2.85591	32.7	-	JFPK01	45	3010	2831	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403917	GCA_000595365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/365/GCA_000595365.1_Stap_aure_DAR5806_V1	-	DAR5806
Staphylococcus aureus DAR5807	1422366	PRJNA228456	228456	Terrabacteria group	Firmicutes	2.89564	32.8	-	JFPL01	69	3048	2874	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403916	GCA_000595385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/385/GCA_000595385.1_Stap_aure_DAR5807_V1	-	DAR5807
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.77251	52.2	-	MYLX01	81	4897	4638	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358515	GCA_002053565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/565/GCA_002053565.1_ASM205356v1	-	BCW_5037
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	5.35016	50.5	-	MIWL01	125	5591	5258	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729302	GCA_001749045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/045/GCA_001749045.1_ASM174904v1	-	K506
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38715	65.6	-	CPFI01	70	4292	4083	3/23/15	3/12/17	Scaffold	SC	SAMEA1707360	GCA_001389215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/215/GCA_001389215.1_8939_3_72	-	2515K
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10223	39.5	-	CRDE01	74	2311	2087	3/23/15	3/4/17	Scaffold	SC	SAMEA1024622	GCA_001148365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/365/GCA_001148365.1_6731_4_11	-	SMRU1067
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.20047	39.5	-	CKJM01	77	2422	2160	3/21/15	3/4/17	Scaffold	SC	SAMEA1023888	GCA_001148385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/385/GCA_001148385.1_6631_5_23	-	6B
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35161	65.6	-	CPAT01	87	4270	4060	3/22/15	3/12/17	Scaffold	SC	SAMEA1707361	GCA_001389235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/235/GCA_001389235.1_8898_8_10	-	2169J
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.90589	50.7	-	MIWM01	140	5091	4784	9/29/16	5/22/17	Contig	Heriot-Watt University	SAMN05729303	GCA_001749055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/055/GCA_001749055.1_ASM174905v1	-	K2026
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83526	52	-	MYLV01	193	4967	4672	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358517	GCA_002053575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/575/GCA_002053575.1_ASM205357v1	-	BCW_5039
Staphylococcus aureus DAR5808	1422365	PRJNA228455	228455	Terrabacteria group	Firmicutes	2.88509	32.8	-	JFPM01	68	3029	2870	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403915	GCA_000595405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/405/GCA_000595405.1_Stap_aure_DAR5808_V1	-	DAR5808
Staphylococcus aureus DAR5809	1422364	PRJNA228454	228454	Terrabacteria group	Firmicutes	2.89046	32.8	-	JFPN01	69	3057	2872	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403914	GCA_000595425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/425/GCA_000595425.1_Stap_aure_DAR5809_V1	-	DAR5809
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.94622	52	-	MYLZ01	102	5080	4801	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358511	GCA_002053585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/585/GCA_002053585.1_ASM205358v1	-	BCW_5011
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	5.13311	50.6	-	MIWN01	178	5471	5144	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729304	GCA_001749065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/065/GCA_001749065.1_ASM174906v1	-	K2328
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3567	65.6	-	CPHN01	83	4284	4064	3/23/15	3/12/17	Scaffold	SC	SAMEA1707362	GCA_001389255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/255/GCA_001389255.1_8987_4_65	-	0051G
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.297	39.6	-	CLFP01	273	2508	2195	3/21/15	3/4/17	Scaffold	SC	SAMEA1025899	GCA_001148425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/425/GCA_001148425.1_6925_3_10	-	SMRU2122
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.17719	39.6	-	CLEM01	100	2418	2172	3/21/15	3/4/17	Scaffold	SC	SAMEA1025941	GCA_001148465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/465/GCA_001148465.1_6899_6_16	-	SMRU2080
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3559	65.6	-	CPHL01	87	4285	4064	3/23/15	3/12/17	Scaffold	SC	SAMEA1707364	GCA_001389275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/275/GCA_001389275.1_8987_4_64	-	1370Q
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.6881	50.8	-	MIWH01	192	4823	4486	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729298	GCA_001749075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/075/GCA_001749075.1_ASM174907v1	-	AF7945
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.56289	52.2	-	MYMB01	106	4605	4341	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358509	GCA_002053625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/625/GCA_002053625.1_ASM205362v1	-	BCW_5009
Staphylococcus aureus DAR5811	1422363	PRJNA228453	228453	Terrabacteria group	Firmicutes	2.8528	32.8	-	JFPO01	68	2995	2808	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403913	GCA_000595445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/445/GCA_000595445.1_Stap_aure_DAR5811_V1	-	DAR5811
Staphylococcus aureus DAR5812	1422362	PRJNA228452	228452	Terrabacteria group	Firmicutes	2.88838	32.8	-	JFPP01	57	3045	2874	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403912	GCA_000595465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/465/GCA_000595465.1_Stap_aure_DAR5812_V1	-	DAR5812
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.20301	51.8	-	MYMI01	759	5438	4955	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358499	GCA_002053655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/655/GCA_002053655.1_ASM205365v1	-	BCW_4985
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	5.11041	50.6	-	MIWJ01	165	5415	5073	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729300	GCA_001749125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/125/GCA_001749125.1_ASM174912v1	-	K34
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36174	65.6	-	CPGM01	75	4293	4047	3/23/15	3/12/17	Scaffold	SC	SAMEA1707368	GCA_001389295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/295/GCA_001389295.1_8987_4_38	-	0622C
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07891	39.7	-	CRNG01	85	2292	2081	3/22/15	3/4/17	Scaffold	SC	SAMEA1025045	GCA_001148485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/485/GCA_001148485.1_6755_3_9	-	SMRU873
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15793	39.5	-	CJZX01	69	2379	2139	3/21/15	3/4/17	Scaffold	SC	SAMEA974687	GCA_001148545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/545/GCA_001148545.1_6259_5_7	-	7B
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38656	65.6	-	CPFF01	76	4298	4078	3/22/15	3/12/17	Scaffold	SC	SAMEA1707370	GCA_001389315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/315/GCA_001389315.1_8939_3_71	-	type strain: 2500
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.72696	50.8	-	MIWK01	100	4836	4591	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729301	GCA_001749135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/135/GCA_001749135.1_ASM174913v1	-	K51
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.34893	51.8	-	MYMJ01	1358	5573	5020	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358498	GCA_002053695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/695/GCA_002053695.1_ASM205369v1	-	BCW_4984
Staphylococcus aureus DAR5813	1422361	PRJNA228451	228451	Terrabacteria group	Firmicutes	2.8892	32.8	-	JFPQ01	65	3030	2880	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403911	GCA_000595485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/485/GCA_000595485.1_Stap_aure_DAR5813_V1	-	DAR5813
Staphylococcus aureus DAR5815	1422359	PRJNA228449	228449	Terrabacteria group	Firmicutes	2.88995	32.8	-	JFPR01	68	3062	2877	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403909	GCA_000595505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/505/GCA_000595505.1_Stap_aure_DAR5815_V1	-	DAR5815
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.27585	51.9	-	MYMT01	696	5420	5007	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358488	GCA_002053825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/825/GCA_002053825.1_ASM205382v1	-	BCW_4953
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.8024	50.9	-	MIWR01	108	4900	4641	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729308	GCA_001749145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/145/GCA_001749145.1_ASM174914v1	-	VL21
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36374	65.6	-	CPGU01	72	4264	4070	3/23/15	3/12/17	Scaffold	SC	SAMEA1707375	GCA_001389335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/335/GCA_001389335.1_8987_4_37	-	0524W
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09711	39.7	-	CKWP01	49	2312	2094	3/21/15	3/4/17	Scaffold	SC	SAMEA1025919	GCA_001148605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/605/GCA_001148605.1_6823_5_4	-	SMRU1948
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.0641	39.7	-	CRFX01	62	2239	1993	3/23/15	3/9/17	Scaffold	SC	SAMEA1025430	GCA_001148645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/645/GCA_001148645.1_6736_5_15	-	SMRU1239
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35518	65.6	-	CPHI01	79	4281	4052	3/23/15	3/12/17	Scaffold	SC	SAMEA1707379	GCA_001389355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/355/GCA_001389355.1_8987_4_62	-	0645C
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.78477	50.7	-	MIWS01	145	4929	4649	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729309	GCA_001749155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/155/GCA_001749155.1_ASM174915v1	-	VL23
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.249	52	-	MYMW01	756	5437	5014	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358485	GCA_002053865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/865/GCA_002053865.1_ASM205386v1	-	BCW_4950
Staphylococcus aureus DAR5816	1422358	PRJNA228448	228448	Terrabacteria group	Firmicutes	2.8237	32.7	-	JFPS01	47	2953	2792	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403908	GCA_000595525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/525/GCA_000595525.1_Stap_aure_DAR5816_V1	-	DAR5816
Staphylococcus aureus DAR5817	1422357	PRJNA228447	228447	Terrabacteria group	Firmicutes	2.88983	32.8	-	JFPT01	67	3055	2871	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403907	GCA_000595545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/545/GCA_000595545.1_Stap_aure_DAR5817_V1	-	DAR5817
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.96194	52	-	MYMY01	553	5081	4733	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358483	GCA_002053895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/895/GCA_002053895.1_ASM205389v1	-	BCW_4948
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	5.2065	50.6	-	MIWU01	196	5522	5166	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729311	GCA_001749205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/205/GCA_001749205.1_ASM174920v1	-	VL66a
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36965	65.6	-	CPDZ01	70	4277	4073	3/23/15	3/12/17	Scaffold	SC	SAMEA1707380	GCA_001389375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/375/GCA_001389375.1_8939_3_27	-	2370C
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.15745	39.5	-	CLVF01	74	2382	2145	3/21/15	3/11/17	Scaffold	SC	SAMEA1025954	GCA_001148725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/725/GCA_001148725.1_6983_3_54	-	SMRU2262
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.1186	39.5	-	CRRB01	63	2331	2112	3/23/15	3/10/17	Scaffold	SC	SAMEA1025063	GCA_001148745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/745/GCA_001148745.1_6791_6_8	-	SMRU632
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35126	65.6	-	CPBK01	89	4265	4054	3/23/15	3/12/17	Scaffold	SC	SAMEA1707383	GCA_001389395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/395/GCA_001389395.1_8898_8_4	-	2216K
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	5.19839	50.6	-	MIWV01	164	5509	5158	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729312	GCA_001749215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/215/GCA_001749215.1_ASM174921v1	-	VL68
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.17032	51.8	-	MYND01	896	5328	4859	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358478	GCA_002053955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/955/GCA_002053955.1_ASM205395v1	-	BCW_4943
Staphylococcus aureus DAR5819	1422355	PRJNA228445	228445	Terrabacteria group	Firmicutes	2.86921	32.8	-	JFPU01	62	3028	2842	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403905	GCA_000595565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/565/GCA_000595565.1_Stap_aure_DAR5819_V1	-	DAR5819
Staphylococcus aureus DAR5820	1422354	PRJNA228444	228444	Terrabacteria group	Firmicutes	2.8356	32.8	-	JFPV01	67	2949	2789	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403904	GCA_000595585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/585/GCA_000595585.1_Stap_aure_DAR5820_V1	-	DAR5820
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.75267	52.2	-	MYNF01	71	4862	4536	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358476	GCA_002053965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/965/GCA_002053965.1_ASM205396v1	-	BCW_4941
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	5.23456	50.2	-	MIWO01	140	5520	5153	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729305	GCA_001749225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/225/GCA_001749225.1_ASM174922v1	-	K6112
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35701	65.6	-	CPGA01	81	4281	4059	3/23/15	3/12/17	Scaffold	SC	SAMEA1707385	GCA_001389415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/415/GCA_001389415.1_8987_4_15	-	0658R
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12811	39.5	-	CMBI01	56	2334	2097	3/21/15	3/10/17	Scaffold	SC	SAMEA1029005	GCA_001148765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/765/GCA_001148765.1_7004_6_43	-	SMRU2851
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.17269	39.4	-	CMCZ01	63	2392	2176	3/21/15	3/10/17	Scaffold	SC	SAMEA1028751	GCA_001148965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/965/GCA_001148965.1_7011_3_12	-	SMRU2748
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35228	65.6	-	CPHK01	82	4269	4059	3/23/15	3/12/17	Scaffold	SC	SAMEA1707387	GCA_001389435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/435/GCA_001389435.1_8987_4_63	-	0666A
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	5.08477	50.7	-	MIWP01	172	5389	5062	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729306	GCA_001749235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/235/GCA_001749235.1_ASM174923v1	-	K6412
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.60675	52.2	-	MYNG01	67	4624	4400	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358475	GCA_002054005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/005/GCA_002054005.1_ASM205400v1	-	BCW_4940
Staphylococcus aureus DAR5821	1422353	PRJNA228443	228443	Terrabacteria group	Firmicutes	2.87919	32.8	-	JFPW01	77	3017	2857	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403903	GCA_000595605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/605/GCA_000595605.1_Stap_aure_DAR5821_V1	-	DAR5821
Staphylococcus aureus DAR5822	1422352	PRJNA228442	228442	Terrabacteria group	Firmicutes	2.88185	32.8	-	JFPX01	72	3022	2862	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403902	GCA_000595625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/625/GCA_000595625.1_Stap_aure_DAR5822_V1	-	DAR5822
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.71514	52.2	-	MYNH01	65	4780	4537	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358474	GCA_002054025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/025/GCA_002054025.1_ASM205402v1	-	BCW_4939
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.92508	50.5	-	MIWQ01	180	5092	4754	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729307	GCA_001749285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/285/GCA_001749285.1_ASM174928v1	-	K6636
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35026	65.6	-	CPGE01	86	4285	4072	3/23/15	3/12/17	Scaffold	SC	SAMEA1707388	GCA_001389455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/455/GCA_001389455.1_8987_4_18	-	0080N
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.07551	39.9	-	CPSK01	197	2246	2055	3/23/15	3/10/17	Scaffold	SC	SAMEA682363	GCA_001149045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/045/GCA_001149045.1_5366_6_12	-	08B09843
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.06603	39.6	-	CMBO01	51	2256	1999	3/21/15	3/10/17	Scaffold	SC	SAMEA1029434	GCA_001149085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/085/GCA_001149085.1_7004_7_53	-	SMRU2885
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35122	65.6	-	CPHJ01	92	4284	4056	3/22/15	3/12/17	Scaffold	SC	SAMEA1707390	GCA_001389475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/475/GCA_001389475.1_8987_4_60	-	0442G
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.84502	50.8	-	MIWT01	138	4983	4662	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729310	GCA_001749295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/295/GCA_001749295.1_ASM174929v1	-	VL49
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70521	52.2	-	MYNI01	31	4790	4572	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358473	GCA_002054055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/055/GCA_002054055.1_ASM205405v1	-	BCW_4938
Staphylococcus aureus DAR5823	1422351	PRJNA228441	228441	Terrabacteria group	Firmicutes	2.89604	32.8	-	JFPY01	69	3033	2871	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403901	GCA_000595645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/645/GCA_000595645.1_Stap_aure_DAR5823_V1	-	DAR5823
Staphylococcus aureus DAR5824	1422350	PRJNA228440	228440	Terrabacteria group	Firmicutes	2.84212	32.8	-	JFPZ01	79	2965	2800	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403900	GCA_000595665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/665/GCA_000595665.1_Stap_aure_DAR5824_V1	-	DAR5824
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.8734	52.3	-	MYNK01	88	5019	4768	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358471	GCA_002054075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/075/GCA_002054075.1_ASM205407v1	-	BCW_4936
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	5.31635	50.4	-	MIWW01	372	5730	5244	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729313	GCA_001749315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/315/GCA_001749315.1_ASM174931v1	-	VL115
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35991	65.6	-	CPBS01	80	4269	4055	3/23/15	3/12/17	Scaffold	SC	SAMEA1707391	GCA_001389495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/495/GCA_001389495.1_8898_8_5	-	2249W
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.16894	39.6	-	CPNK01	254	2350	2148	3/22/15	3/10/17	Scaffold	SC	SAMEA682561	GCA_001149185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/185/GCA_001149185.1_5392_6_12	-	spnIC197
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.06378	39.6	-	CMAE01	71	2275	2032	3/21/15	3/10/17	Scaffold	SC	SAMEA1028761	GCA_001149205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/205/GCA_001149205.1_7004_5_17	-	SMRU2873
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36578	65.6	-	CPFK01	73	4275	4074	3/22/15	3/12/17	Scaffold	SC	SAMEA1707393	GCA_001389515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/515/GCA_001389515.1_8939_3_76	-	2396F
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.74485	50.8	-	MIWX01	133	4864	4581	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729314	GCA_001749325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/325/GCA_001749325.1_ASM174932v1	-	VL118
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66792	52.2	-	MYNL01	33	4735	4512	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358470	GCA_002054085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/085/GCA_002054085.1_ASM205408v1	-	BCW_4935
Staphylococcus aureus DAR5825	1422349	PRJNA228439	228439	Terrabacteria group	Firmicutes	2.83306	32.8	-	JFQA01	59	2977	2795	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403899	GCA_000595685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/685/GCA_000595685.1_Stap_aure_DAR5825_V1	-	DAR5825
Staphylococcus aureus DAR5826	1422348	PRJNA228438	228438	Terrabacteria group	Firmicutes	2.89499	32.8	-	JFQB01	84	3069	2871	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403898	GCA_000595705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/705/GCA_000595705.1_Stap_aure_DAR5826_V1	-	DAR5826
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.67043	52.2	-	MYNM01	57	4732	4509	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358469	GCA_002054115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/115/GCA_002054115.1_ASM205411v1	-	BCW_4934
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	5.40572	50.5	-	MIWY01	153	5588	5236	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729315	GCA_001749365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/365/GCA_001749365.1_ASM174936v1	-	VL119
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34368	65.6	-	CPCB01	85	4263	4047	3/23/15	3/12/17	Scaffold	SC	SAMEA1707396	GCA_001389535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/535/GCA_001389535.1_8898_8_6	-	2279D
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.24874	39.6	-	CMFM01	65	2485	2247	3/21/15	3/11/17	Scaffold	SC	SAMEA1028818	GCA_001149225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/225/GCA_001149225.1_7011_6_4	-	SMRU2812
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09737	39.7	-	CKZD01	53	2324	2096	3/21/15	3/10/17	Scaffold	SC	SAMEA1025960	GCA_001149245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/245/GCA_001149245.1_6840_1_13	-	SMRU1765
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34673	65.6	-	CPFA01	76	4273	4049	3/22/15	3/12/17	Scaffold	SC	SAMEA1707397	GCA_001389555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/555/GCA_001389555.1_8939_3_6	-	2473P
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.96327	50.6	-	MIWZ01	134	5137	4861	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729316	GCA_001749375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/375/GCA_001749375.1_ASM174937v1	-	VL122
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.62992	52.3	-	MYNN01	74	4669	4441	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358468	GCA_002054125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/125/GCA_002054125.1_ASM205412v1	-	BCW_4933
Staphylococcus aureus DAR5827	1422347	PRJNA228437	228437	Terrabacteria group	Firmicutes	2.84687	32.8	-	JFQC01	67	2989	2800	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403897	GCA_000595725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/725/GCA_000595725.1_Stap_aure_DAR5827_V1	-	DAR5827
Staphylococcus aureus DAR5828	1422346	PRJNA228436	228436	Terrabacteria group	Firmicutes	2.8906	32.8	-	JFQD01	62	3030	2875	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403896	GCA_000595745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/745/GCA_000595745.1_Stap_aure_DAR5828_V1	-	DAR5828
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80711	52	-	MYNO01	79	4889	4642	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358466	GCA_002054145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/145/GCA_002054145.1_ASM205414v1	-	BCW_4931
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.85941	50.5	-	MIXA01	142	5031	4719	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729317	GCA_001749385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/385/GCA_001749385.1_ASM174938v1	-	VL123
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34638	65.6	-	CPFJ01	74	4245	4052	3/23/15	3/18/17	Scaffold	SC	SAMEA1707398	GCA_001389575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/575/GCA_001389575.1_8939_3_75	-	2379M
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.01209	39.8	-	CLRV01	49	2223	2020	3/21/15	3/10/17	Scaffold	SC	SAMEA1028897	GCA_001149265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/265/GCA_001149265.1_6972_2_7	-	SMRU2551
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09479	39.7	-	CMCN01	59	2308	2088	3/21/15	3/11/17	Scaffold	SC	SAMEA1029302	GCA_001149325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/325/GCA_001149325.1_7004_8_81	-	SMRU2913
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3502	65.6	-	CPCJ01	80	4262	4060	3/23/15	3/12/17	Scaffold	SC	SAMEA1707399	GCA_001389595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/595/GCA_001389595.1_8898_8_7	-	2302D
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	5.08136	50.5	-	MIXB01	146	5303	4986	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729318	GCA_001749415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/415/GCA_001749415.1_ASM174941v1	-	VL127
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.75729	52.1	-	MYNP01	65	4817	4577	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358465	GCA_002054165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/165/GCA_002054165.1_ASM205416v1	-	BCW_4930
Staphylococcus aureus DAR5829	1422345	PRJNA228435	228435	Terrabacteria group	Firmicutes	2.88999	32.8	-	JFQE01	73	3039	2872	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403895	GCA_000595765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/765/GCA_000595765.1_Stap_aure_DAR5829_V1	-	DAR5829
Staphylococcus aureus DAR5830	1422344	PRJNA228434	228434	Terrabacteria group	Firmicutes	2.84796	32.8	-	JFQF01	65	2961	2806	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403894	GCA_000595785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/785/GCA_000595785.1_Stap_aure_DAR5830_V1	-	DAR5830
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.84389	52.1	-	MYNR01	98	4993	4653	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358463	GCA_002054195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/195/GCA_002054195.1_ASM205419v1	-	BCW_4928
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.9721	50.6	-	MIXC01	160	5168	4868	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729319	GCA_001749435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/435/GCA_001749435.1_ASM174943v1	-	VL128
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38786	65.6	-	CPGC01	77	4285	4081	3/23/15	3/12/17	Scaffold	SC	SAMEA1707400	GCA_001389615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/615/GCA_001389615.1_8987_4_17	-	0019X
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.14011	39.5	-	CLIP01	51	2347	2115	3/21/15	3/11/17	Scaffold	SC	SAMEA1028949	GCA_001149345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/345/GCA_001149345.1_6925_7_16	-	SMRU2512
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.15041	39.4	-	CMGY01	60	2418	2161	3/22/15	3/10/17	Scaffold	SC	SAMEA1029276	GCA_001149405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/405/GCA_001149405.1_7038_4_9	-	SMRU2937
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3581	65.6	-	CPEI01	75	4287	4067	3/23/15	3/12/17	Scaffold	SC	SAMEA1707402	GCA_001389635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/635/GCA_001389635.1_8939_3_4	-	type strain: 2385
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	5.45105	50.6	-	MIXE01	176	5870	5485	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729321	GCA_001749455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/455/GCA_001749455.1_ASM174945v1	-	VL2507-1
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66901	52.3	-	MYNT01	64	4698	4469	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358461	GCA_002054205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/205/GCA_002054205.1_ASM205420v1	-	BCW_4926
Staphylococcus aureus DAR5831	1422343	PRJNA228433	228433	Terrabacteria group	Firmicutes	2.84637	32.8	-	JFQG01	70	2983	2808	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403893	GCA_000595805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/805/GCA_000595805.1_Stap_aure_DAR5831_V1	-	DAR5831
Staphylococcus aureus DAR5832	1422342	PRJNA228432	228432	Terrabacteria group	Firmicutes	2.7991	32.8	-	JFQH01	64	2926	2743	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403892	GCA_000595825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/825/GCA_000595825.1_Stap_aure_DAR5832_V1	-	DAR5832
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.90415	52.2	-	MYNV01	69	5063	4811	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358459	GCA_002054225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/225/GCA_002054225.1_ASM205422v1	-	BCW_4924
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	5.14603	50.5	-	MIXF01	300	5512	5044	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729322	GCA_001749465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/465/GCA_001749465.1_ASM174946v1	-	VL2604
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36196	65.6	-	CPJI01	86	4300	4065	3/23/15	3/12/17	Scaffold	SC	SAMEA1707405	GCA_001389655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/655/GCA_001389655.1_8987_5_5	-	2528Z
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05423	39.7	-	CMEA01	72	2256	2036	3/21/15	3/10/17	Scaffold	SC	SAMEA1029091	GCA_001149485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/485/GCA_001149485.1_7011_4_17	-	SMRU2777
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.04163	39.6	-	CRPK01	52	2224	2021	3/23/15	3/10/17	Scaffold	SC	SAMEA1024793	GCA_001149505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/505/GCA_001149505.1_6775_1_19	-	SMRU835
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35502	65.6	-	CPEM01	73	4263	4067	3/22/15	3/12/17	Scaffold	SC	SAMEA1707406	GCA_001389675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/675/GCA_001389675.1_8939_3_45	-	2438B
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.96155	50.7	-	MIXG01	115	5126	4807	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729323	GCA_001749505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/505/GCA_001749505.1_ASM174950v1	-	VL2619-1
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.90461	52.2	-	MYNW01	71	5063	4815	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358458	GCA_002054255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/255/GCA_002054255.1_ASM205425v1	-	BCW_4923
Staphylococcus aureus DAR5833	1422341	PRJNA228431	228431	Terrabacteria group	Firmicutes	2.8789	32.8	-	JFQI01	68	3018	2864	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403891	GCA_000595845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/845/GCA_000595845.1_Stap_aure_DAR5833_V1	-	DAR5833
Staphylococcus aureus DAR5834	1422340	PRJNA228430	228430	Terrabacteria group	Firmicutes	2.88787	32.8	-	JFQJ01	65	3028	2869	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403890	GCA_000595865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/865/GCA_000595865.1_Stap_aure_DAR5834_V1	-	DAR5834
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.92761	52.3	-	MYNX01	67	5025	4777	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358457	GCA_002054265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/265/GCA_002054265.1_ASM205426v1	-	BCW_4922
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.87137	50.6	-	MIXI01	85	5014	4757	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729325	GCA_001749525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/525/GCA_001749525.1_ASM174952v1	-	VL2632
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37751	65.6	-	CPEP01	65	4284	4080	3/23/15	3/12/17	Scaffold	SC	SAMEA1707407	GCA_001389695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/695/GCA_001389695.1_8939_3_5	-	type strain: 2408
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07313	39.6	-	CRQK01	75	2263	2012	3/23/15	3/10/17	Scaffold	SC	SAMEA1024827	GCA_001149585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/585/GCA_001149585.1_6775_2_5	-	SMRU845
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.31457	39.4	-	CLNY01	77	2575	2294	3/21/15	3/4/17	Scaffold	SC	SAMEA1028935	GCA_001149665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/665/GCA_001149665.1_6949_1_16	-	SMRU2416
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38261	65.6	-	CPIS01	80	4288	4066	3/22/15	3/18/17	Scaffold	SC	SAMEA1707408	GCA_001389715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/715/GCA_001389715.1_8987_5_23	-	2570V
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	5.00788	50.7	-	MIXJ01	267	5285	4856	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729326	GCA_001749535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/535/GCA_001749535.1_ASM174953v1	-	VL2638
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.78781	52.1	-	MYNS01	51	4903	4654	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358462	GCA_002054295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/295/GCA_002054295.1_ASM205429v1	-	BCW_4927
Staphylococcus aureus DAR5835	1422339	PRJNA228429	228429	Terrabacteria group	Firmicutes	2.87697	32.8	-	JFQK01	65	3015	2860	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403889	GCA_000595885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/885/GCA_000595885.1_Stap_aure_DAR5835_V1	-	DAR5835
Staphylococcus aureus DAR5836	1422338	PRJNA228428	228428	Terrabacteria group	Firmicutes	2.84576	32.7	-	JFQL01	67	2970	2813	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403888	GCA_000595905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/905/GCA_000595905.1_Stap_aure_DAR5836_V1	-	DAR5836
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69084	52.2	-	MYNY01	61	4734	4507	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358456	GCA_002054305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/305/GCA_002054305.1_ASM205430v1	-	BCW_4921
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	5.11766	50.7	-	MIXM01	76	5280	5004	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729329	GCA_001749565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/565/GCA_001749565.1_ASM174956v1	-	VL2762-1
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35515	65.6	-	CPIA01	86	4286	4064	3/23/15	3/12/17	Scaffold	SC	SAMEA1707410	GCA_001389735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/735/GCA_001389735.1_8987_4_86	-	0649G
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1236	39.7	-	CLVO01	71	2297	2031	3/21/15	3/6/17	Scaffold	SC	SAMEA1026017	GCA_001149785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/785/GCA_001149785.1_6983_3_70	-	SMRU2278
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08874	39.5	-	CLQQ01	59	2287	2051	3/21/15	3/4/17	Scaffold	SC	SAMEA1029031	GCA_001149805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/805/GCA_001149805.1_6949_4_3	-	SMRU2475
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34974	65.6	-	CPIB01	90	4282	4060	3/22/15	3/12/17	Scaffold	SC	SAMEA1707412	GCA_001389755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/755/GCA_001389755.1_8987_4_88	-	1377Y
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	5.04058	50.7	-	MIXN01	108	5291	4978	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729330	GCA_001749585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/585/GCA_001749585.1_ASM174958v1	-	VL2762-4
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.90475	52.2	-	MYNZ01	78	5062	4817	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358455	GCA_002054325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/325/GCA_002054325.1_ASM205432v1	-	BCW_4920
Staphylococcus aureus DAR5837	1422337	PRJNA228427	228427	Terrabacteria group	Firmicutes	2.81608	32.8	-	JFQM01	65	2958	2781	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403887	GCA_000595925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/925/GCA_000595925.1_Stap_aure_DAR5837_V1	-	DAR5837
Staphylococcus aureus DAR5838	1422336	PRJNA228426	228426	Terrabacteria group	Firmicutes	2.84254	32.8	-	JFQN01	71	2992	2807	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403886	GCA_000595945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/945/GCA_000595945.1_Stap_aure_DAR5838_V1	-	DAR5838
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69688	52.2	-	MYOA01	28	4757	4544	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358454	GCA_002054355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/355/GCA_002054355.1_ASM205435v1	-	BCW_4919
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	5.14036	50.5	-	MIXO01	136	5282	4947	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729331	GCA_001749595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/595/GCA_001749595.1_ASM174959v1	-	VL2764
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35207	65.6	-	CPEJ01	76	4274	4056	3/22/15	3/12/17	Scaffold	SC	SAMEA1707413	GCA_001389775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/775/GCA_001389775.1_8939_3_43	-	2372E
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.01999	39.8	-	CPNN01	92	2201	1996	3/22/15	3/4/17	Scaffold	SC	SAMEA682555	GCA_001149925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/925/GCA_001149925.1_5366_7_12	-	09B00294
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10214	39.5	-	CRES01	58	2299	2056	3/23/15	3/4/17	Scaffold	SC	SAMEA1024884	GCA_001149965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/965/GCA_001149965.1_6731_6_12	-	SMRU1116
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35981	65.6	-	CPIZ01	83	4289	4058	3/22/15	3/12/17	Scaffold	SC	SAMEA1707414	GCA_001389795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/795/GCA_001389795.1_8987_5_4	-	2527Y
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	5.08752	50.6	-	MIXD01	194	5302	4973	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729320	GCA_001749625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/625/GCA_001749625.1_ASM174962v1	-	VL2395
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80201	52.1	-	MYOB01	72	4924	4661	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358453	GCA_002054375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/375/GCA_002054375.1_ASM205437v1	-	BCW_4918
Staphylococcus aureus DAR5839	1422335	PRJNA228425	228425	Terrabacteria group	Firmicutes	2.85061	32.8	-	JFQO01	76	3005	2808	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403885	GCA_000595965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/965/GCA_000595965.1_Stap_aure_DAR5839_V1	-	DAR5839
Staphylococcus aureus DAR5840	1422334	PRJNA228424	228424	Terrabacteria group	Firmicutes	2.84998	32.8	-	JFQP01	72	2965	2802	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403884	GCA_000595985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/595/985/GCA_000595985.1_Stap_aure_DAR5840_V1	-	DAR5840
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7523	52	-	MYOC01	37	4822	4587	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358452	GCA_002054385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/385/GCA_002054385.1_ASM205438v1	-	BCW_4917
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.79773	50.6	-	MIXH01	151	5005	4653	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729324	GCA_001749635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/635/GCA_001749635.1_ASM174963v1	-	VL2622
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3581	65.6	-	CPEB01	58	4266	4069	3/23/15	3/12/17	Scaffold	SC	SAMEA1707415	GCA_001389815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/815/GCA_001389815.1_8939_3_3	-	2366Y
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.14346	39.5	-	CPQA01	81	2362	2108	3/23/15	3/6/17	Scaffold	SC	SAMEA1020059	GCA_001149985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/985/GCA_001149985.1_6187_5_12	-	LMG690
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14279	39.6	-	CKNT01	51	2374	2143	3/21/15	3/4/17	Scaffold	SC	SAMEA1023734	GCA_001150025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/025/GCA_001150025.1_6664_1_9	-	6C
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3734	65.6	-	CPEK01	81	4283	4059	3/22/15	3/12/17	Scaffold	SC	SAMEA1707418	GCA_001389855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/855/GCA_001389855.1_8939_3_44	-	2392B
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	5.12582	50.5	-	MIXK01	144	5391	5057	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729327	GCA_001749665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/665/GCA_001749665.1_ASM174966v1	-	VL2729-1
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.76027	52.1	-	MYOD01	183	4809	4573	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358451	GCA_002054395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/395/GCA_002054395.1_ASM205439v1	-	BCW_4916
Staphylococcus aureus DAR5841	1422333	PRJNA228423	228423	Terrabacteria group	Firmicutes	2.8971	32.8	-	JFQQ01	66	3025	2874	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403883	GCA_000596005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/005/GCA_000596005.1_Stap_aure_DAR5841_V1	-	DAR5841
Staphylococcus aureus DAR5843	1422332	PRJNA228422	228422	Terrabacteria group	Firmicutes	2.86489	32.8	-	JFQR01	95	3030	2822	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403882	GCA_000596025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/025/GCA_000596025.1_Stap_aure_DAR5843_V1	-	DAR5843
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83041	51.9	-	MYOF01	64	4926	4679	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358449	GCA_002054435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/435/GCA_002054435.1_ASM205443v1	-	BCW_4914
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.92485	50.7	-	MIXL01	126	5138	4834	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729328	GCA_001749675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/675/GCA_001749675.1_ASM174967v1	-	VL2738
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36277	65.6	-	CPHG01	69	4270	4065	3/22/15	3/12/17	Scaffold	SC	SAMEA1707419	GCA_001389875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/875/GCA_001389875.1_8987_4_59	-	0327G
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11533	39.5	-	CKMY01	51	2333	2106	3/21/15	3/4/17	Scaffold	SC	SAMEA1024071	GCA_001150045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/045/GCA_001150045.1_6649_8_2	-	23F
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.07666	39.6	-	CMAQ01	49	2279	2046	3/21/15	3/4/17	Scaffold	SC	SAMEA1028630	GCA_001150105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/105/GCA_001150105.1_7004_6_27	-	SMRU2835
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35631	65.6	-	CPDT01	79	4283	4064	3/23/15	3/12/17	Scaffold	SC	SAMEA1707421	GCA_001389895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/895/GCA_001389895.1_8939_3_2	-	2351G
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	4.95819	50.6	-	MIXP01	119	5134	4824	9/29/16	2/25/17	Contig	Heriot-Watt University	SAMN05729292	GCA_001749705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/749/705/GCA_001749705.1_ASM174970v1	-	AF7607
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69964	52.2	-	MYOJ01	65	4780	4543	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358445	GCA_002054455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/455/GCA_002054455.1_ASM205445v1	-	BCW_4910
Staphylococcus aureus DAR5845	1422331	PRJNA228421	228421	Terrabacteria group	Firmicutes	2.91831	32.8	-	JFQS01	100	3107	2907	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403881	GCA_000596045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/045/GCA_000596045.1_Stap_aure_DAR5845_V1	-	DAR5845
Staphylococcus aureus DAR5846	1422330	PRJNA228420	228420	Terrabacteria group	Firmicutes	2.81396	32.8	-	JFQT01	40	2924	2779	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403880	GCA_000596065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/065/GCA_000596065.1_Stap_aure_DAR5846_V1	-	DAR5846
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83099	52.2	-	MYOG01	83	4975	4719	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358448	GCA_002054465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/465/GCA_002054465.1_ASM205446v1	-	BCW_4913
Escherichia coli	562	PRJNA319144	319144	Proteobacteria	Gammaproteobacteria	4.73499	50.6	-	MAYE01	81	4959	4623	10/12/16	2/25/17	Contig	University of Lodz	SAMN05363641	GCA_001758245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/245/GCA_001758245.1_ASM175824v1	-	022PP2016
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39246	65.6	-	CPIT01	67	4290	4091	3/23/15	3/12/17	Scaffold	SC	SAMEA1707422	GCA_001389915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/915/GCA_001389915.1_8987_5_3	-	2526X
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.03815	39.6	-	CKOA01	49	2231	2012	3/21/15	3/4/17	Scaffold	SC	SAMEA1024054	GCA_001150185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/185/GCA_001150185.1_6673_8_23	-	SMRU263
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.23288	39.4	-	CLOZ01	78	2473	2203	3/21/15	3/4/17	Scaffold	SC	SAMEA1028650	GCA_001150205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/205/GCA_001150205.1_6949_2_6	-	SMRU2430
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36156	65.6	-	CPHY01	93	4295	4054	3/23/15	3/12/17	Scaffold	SC	SAMEA1707424	GCA_001389935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/935/GCA_001389935.1_8987_4_84	-	0466H
Escherichia coli	562	PRJNA348710	348710	Proteobacteria	Gammaproteobacteria	5.25108	50.5	-	MLZI01	113	5515	5105	10/26/16	2/25/17	Contig	University of Glasgow	SAMN05914511	GCA_001854565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/565/GCA_001854565.1_ASM185456v1	-	F-18
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.61771	52.3	-	MYOK01	53	4672	4430	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358443	GCA_002054495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/495/GCA_002054495.1_ASM205449v1	-	BCW_4908
Staphylococcus aureus DAR5847	1422329	PRJNA228419	228419	Terrabacteria group	Firmicutes	2.80259	32.8	-	JFQU01	59	2927	2739	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403879	GCA_000596085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/085/GCA_000596085.1_Stap_aure_DAR5847_V1	-	DAR5847
Staphylococcus aureus DAR5848	1422328	PRJNA228418	228418	Terrabacteria group	Firmicutes	2.95156	32.9	-	JFQV01	119	3147	2931	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403878	GCA_000596105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/105/GCA_000596105.1_Stap_aure_DAR5848_V1	-	DAR5848
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.74827	52.2	-	MYOL01	81	4855	4609	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358442	GCA_002054515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/515/GCA_002054515.1_ASM205451v1	-	BCW_4907
Escherichia coli	562	PRJNA350675	350675	Proteobacteria	Gammaproteobacteria	4.72032	50.5	-	MOED01	580	4878	4554	11/3/16	2/25/17	Contig	"Korea National Institute of Health, Korea Centers for Disease Control & Prevention"	SAMN05943627	GCA_001865725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/725/GCA_001865725.1_ASM186572v1	-	NCCP 15740
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35294	65.6	-	CPCA01	82	4274	4066	3/23/15	3/12/17	Scaffold	SC	SAMEA1707425	GCA_001389955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/955/GCA_001389955.1_8898_8_59	-	2208B
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09509	39.7	-	CLUF01	74	2332	2117	3/21/15	3/10/17	Scaffold	SC	SAMEA1025714	GCA_001150265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/265/GCA_001150265.1_6983_2_20	-	SMRU2228
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11577	39.4	-	CRVJ01	69	2352	2128	3/22/15	3/10/17	Scaffold	SC	SAMEA1025752	GCA_001150285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/285/GCA_001150285.1_6805_7_12	-	SMRU1741
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35368	65.6	-	CPIR01	86	4294	4059	3/22/15	3/18/17	Scaffold	SC	SAMEA1707426	GCA_001389975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/975/GCA_001389975.1_8987_5_21	-	2568S
Escherichia coli	562	PRJNA275512	275512	Proteobacteria	Gammaproteobacteria	4.94413	50.6	-	LSMG01	781	5380	4785	11/7/16	2/25/17	Contig	"West China Hospital, Sichuan University"	SAMN04482604	GCA_001867205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/867/205/GCA_001867205.1_ASM186720v1	-	WCHEC1613
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70951	52.2	-	MYOM01	61	4778	4542	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358441	GCA_002054535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/535/GCA_002054535.1_ASM205453v1	-	BCW_4906
Staphylococcus aureus DAR5849	1422327	PRJNA228417	228417	Terrabacteria group	Firmicutes	2.87078	32.8	-	JFQW01	88	3031	2833	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403877	GCA_000596125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/125/GCA_000596125.1_Stap_aure_DAR5849_V1	-	DAR5849
Staphylococcus aureus DAR5850	1422326	PRJNA228416	228416	Terrabacteria group	Firmicutes	2.93798	32.8	-	JFQX01	107	3116	2923	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403876	GCA_000596145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/145/GCA_000596145.1_Stap_aure_DAR5850_V1	-	DAR5850
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.82639	52.2	-	MYON01	57	4953	4705	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358440	GCA_002054545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/545/GCA_002054545.1_ASM205454v1	-	BCW_4905
Escherichia coli	562	PRJNA292901	292901	Proteobacteria	Gammaproteobacteria	5.46874	50.6	-	MPCP01	4	5723	5357	11/10/16	2/25/17	Contig	Centers for Disease Control and Prevention	SAMN04014842	GCA_001874785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/785/GCA_001874785.1_ASM187478v1	-	AR_0001
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35226	65.6	-	CPHZ01	86	4275	4063	3/22/15	3/12/17	Scaffold	SC	SAMEA1707431	GCA_001389995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/389/995/GCA_001389995.1_8987_4_85	-	0574A
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.18647	39.7	-	CIMV01	77	2373	2125	3/21/15	3/10/17	Scaffold	SC	SAMEA1025373	GCA_001150305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/305/GCA_001150305.1_6753_2_6	-	SMRU1494
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.13721	39.5	-	CKEA01	140	2410	2141	3/21/15	3/10/17	Scaffold	SC	SAMEA1024043	GCA_001150485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/485/GCA_001150485.1_6630_1_3	-	23F
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35422	65.6	-	CPDM01	69	4286	4053	3/23/15	3/12/17	Scaffold	SC	SAMEA1707435	GCA_001390035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/035/GCA_001390035.1_8939_3_1	-	2337R
Escherichia coli	562	PRJNA292904	292904	Proteobacteria	Gammaproteobacteria	5.35378	50.5	-	MPCO01	10	5646	5226	11/10/16	2/25/17	Contig	Centers for Disease Control and Prevention	SAMN04014889	GCA_001874845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/874/845/GCA_001874845.1_ASM187484v1	-	AR_0048
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66518	52.2	-	MYOP01	39	4707	4481	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358438	GCA_002054555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/555/GCA_002054555.1_ASM205455v1	-	BCW_4903
Staphylococcus aureus DAR5851	1422325	PRJNA228415	228415	Terrabacteria group	Firmicutes	2.88718	32.8	-	JFQY01	65	3024	2876	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403875	GCA_000596165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/165/GCA_000596165.1_Stap_aure_DAR5851_V1	-	DAR5851
Staphylococcus aureus DAR5853	1422323	PRJNA228413	228413	Terrabacteria group	Firmicutes	2.89522	32.8	-	JFQZ01	68	3064	2875	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403873	GCA_000596185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/185/GCA_000596185.1_Stap_aure_DAR5853_V1	-	DAR5853
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.09235	51.8	-	MYLA01	525	5146	4759	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358546	GCA_002054595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/595/GCA_002054595.1_ASM205459v1	-	BCW_5092
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.20332	50.6	-	MDXC01	49	5497	5131	11/14/16	3/13/17	Contig	Santa Clara University	SAMN05561035	GCA_001877805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/805/GCA_001877805.1_ASM187780v1	-	SF-452
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35743	65.6	-	CPEL01	84	4278	4061	3/22/15	3/12/17	Scaffold	SC	SAMEA1707437	GCA_001390055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/055/GCA_001390055.1_8939_3_46	-	2484B
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.17314	39.5	-	CPPU01	81	2396	2181	3/23/15	3/11/17	Scaffold	SC	SAMEA682268	GCA_001150545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/545/GCA_001150545.1_5390_1_7	-	spnIC6
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.16712	39.6	-	CKBK01	58	2331	2020	3/21/15	3/10/17	Scaffold	SC	SAMEA974620	GCA_001150605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/605/GCA_001150605.1_6259_7_8	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35987	65.6	-	CPBY01	86	4291	4060	3/22/15	3/12/17	Scaffold	SC	SAMEA1707438	GCA_001390075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/075/GCA_001390075.1_8898_8_56	-	2327F
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.17007	50.6	-	MDXB01	30	5430	5082	11/14/16	4/6/17	Contig	Santa Clara University	SAMN05560415	GCA_001877815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/877/815/GCA_001877815.1_ASM187781v1	-	SF-384
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.84544	52.1	-	MYOQ01	98	4997	4658	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358437	GCA_002054615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/615/GCA_002054615.1_ASM205461v1	-	BCW_4902
Staphylococcus aureus DAR5854	1422322	PRJNA228412	228412	Terrabacteria group	Firmicutes	2.89689	32.8	-	JFRA01	81	3069	2878	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403872	GCA_000596205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/205/GCA_000596205.1_Stap_aure_DAR5854_V1	-	DAR5854
Staphylococcus aureus DAR5856	1422320	PRJNA228410	228410	Terrabacteria group	Firmicutes	2.87847	32.8	-	JFRB01	81	3028	2858	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403870	GCA_000596225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/225/GCA_000596225.1_Stap_aure_DAR5856_V1	-	DAR5856
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.15968	51.8	-	MYKS01	738	5240	4879	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358554	GCA_002054635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/635/GCA_002054635.1_ASM205463v1	-	BCW_5100
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.12328	50.7	-	MKIZ01	54	5439	4995	11/17/16	4/6/17	Contig	Santa Clara University	SAMN05607985	GCA_001881045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/045/GCA_001881045.1_ASM188104v1	-	SF-501
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35583	65.6	-	CPDK01	72	4267	4076	3/23/15	3/12/17	Scaffold	SC	SAMEA1707440	GCA_001390095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/095/GCA_001390095.1_8898_8_96	-	2336Q
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.01463	39.8	-	CMLX01	42	2247	2004	3/23/15	3/11/17	Scaffold	SC	SAMEA1029267	GCA_001150645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/645/GCA_001150645.1_7054_6_3	-	SMRU3075
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15914	39.6	-	CJZH01	63	2346	2104	3/21/15	3/10/17	Scaffold	SC	SAMEA974662	GCA_001150685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/685/GCA_001150685.1_6259_5_1	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34932	65.6	-	CPBZ01	71	4246	4076	3/23/15	3/12/17	Scaffold	SC	SAMEA1707443	GCA_001390115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/115/GCA_001390115.1_8898_8_57	-	1538Y
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.14703	50.7	-	MKJB01	36	5404	5034	11/17/16	4/6/17	Contig	Santa Clara University	SAMN05607987	GCA_001881055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/055/GCA_001881055.1_ASM188105v1	-	SF-522
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.09429	51.8	-	MYLC01	857	5051	4728	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358544	GCA_002054645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/645/GCA_002054645.1_ASM205464v1	-	BCW_5090
Staphylococcus aureus DAR5857	1422319	PRJNA228409	228409	Terrabacteria group	Firmicutes	2.88775	32.8	-	JFRC01	67	3032	2875	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403869	GCA_000596245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/245/GCA_000596245.1_Stap_aure_DAR5857_V1	-	DAR5857
Staphylococcus aureus DAR5858	1422318	PRJNA228408	228408	Terrabacteria group	Firmicutes	2.88612	32.8	-	JFRD01	68	3026	2867	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403868	GCA_000596265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/265/GCA_000596265.1_Stap_aure_DAR5858_V1	-	DAR5858
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.03082	51.8	-	MYLN01	432	5136	4822	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358528	GCA_002054655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/655/GCA_002054655.1_ASM205465v1	-	BCW_5051
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.30856	50.6	-	MKJH01	61	5647	5214	11/17/16	4/6/17	Contig	Santa Clara University	SAMN05607993	GCA_001881075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/075/GCA_001881075.1_ASM188107v1	-	SF-626
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38374	65.6	-	CPAS01	82	4290	4091	3/22/15	3/12/17	Scaffold	SC	SAMEA1707446	GCA_001390135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/135/GCA_001390135.1_8898_8_12	-	2219N
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07072	39.7	-	CREH01	89	2276	2072	3/22/15	3/10/17	Scaffold	SC	SAMEA1024811	GCA_001150725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/725/GCA_001150725.1_6731_5_21	-	SMRU1101
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10347	39.6	-	CRIK01	50	2306	2035	3/22/15	3/11/17	Scaffold	SC	SAMEA1025580	GCA_001150745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/745/GCA_001150745.1_6753_1_1	-	SMRU1465
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35012	65.6	-	CPBX01	87	4282	4063	3/23/15	3/12/17	Scaffold	SC	SAMEA1707450	GCA_001390155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/155/GCA_001390155.1_8898_8_55	-	2312P
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.08913	50.7	-	MKJJ01	19	5303	4960	11/17/16	4/6/17	Contig	Santa Clara University	SAMN05608005	GCA_001881105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/105/GCA_001881105.1_ASM188110v1	-	SF-126
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.50587	52.2	-	MYLO01	42	4511	4289	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358527	GCA_002054705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/705/GCA_002054705.1_ASM205470v1	-	BCW_5050
Staphylococcus aureus DAR5859	1422317	PRJNA228407	228407	Terrabacteria group	Firmicutes	2.88665	32.8	-	JFRE01	70	3029	2865	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403867	GCA_000596285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/285/GCA_000596285.1_Stap_aure_DAR5859_V1	-	DAR5859
Staphylococcus aureus DAR5861	1422316	PRJNA228406	228406	Terrabacteria group	Firmicutes	2.89188	32.8	-	JFRF01	77	3037	2870	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403866	GCA_000596305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/305/GCA_000596305.1_Stap_aure_DAR5861_V1	-	DAR5861
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.04939	51.7	-	MYLP01	727	5009	4700	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358526	GCA_002054725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/725/GCA_002054725.1_ASM205472v1	-	BCW_5049
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.1637	50.6	-	MKJK01	31	5439	5088	11/17/16	4/6/17	Contig	Santa Clara University	SAMN05608023	GCA_001881125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/125/GCA_001881125.1_ASM188112v1	-	MVAST0098
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35447	65.6	-	CPDI01	82	4271	4060	3/22/15	3/12/17	Scaffold	SC	SAMEA1707451	GCA_001390175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/175/GCA_001390175.1_8898_8_95	-	2318W
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.03781	39.7	-	CLON01	55	2245	2038	3/21/15	3/10/17	Scaffold	SC	SAMEA1028998	GCA_001150785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/785/GCA_001150785.1_6949_2_1	-	SMRU2425
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05632	39.8	-	CMFU01	98	2233	2042	3/21/15	3/10/17	Scaffold	SC	SAMEA1029089	GCA_001150825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/825/GCA_001150825.1_7011_6_23	-	SMRU2831
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3537	65.6	-	CPDL01	88	4267	4054	3/22/15	3/12/17	Scaffold	SC	SAMEA1707457	GCA_001390195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/195/GCA_001390195.1_8898_8_93	-	2277B
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.18304	50.4	-	MKJN01	34	5473	5089	11/17/16	4/6/17	Contig	Santa Clara University	SAMN05608028	GCA_001881145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/145/GCA_001881145.1_ASM188114v1	-	MVAST0326
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.67912	52.2	-	MYLQ01	128	4737	4517	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358525	GCA_002054745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/745/GCA_002054745.1_ASM205474v1	-	BCW_5048
Staphylococcus aureus DAR5862	1422315	PRJNA228405	228405	Terrabacteria group	Firmicutes	2.84452	32.8	-	JFRG01	66	2965	2808	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403865	GCA_000596325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/325/GCA_000596325.1_Stap_aure_DAR5862_V1	-	DAR5862
Staphylococcus aureus DAR5863	1422314	PRJNA228404	228404	Terrabacteria group	Firmicutes	2.84522	32.8	-	JFRH01	67	2978	2800	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403864	GCA_000596345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/345/GCA_000596345.1_Stap_aure_DAR5863_V1	-	DAR5863
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.88692	52	-	MYLT01	177	5054	4747	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358519	GCA_002054775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/775/GCA_002054775.1_ASM205477v1	-	BCW_5041
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.2282	50.6	-	MKJO01	34	5521	5141	11/17/16	4/6/17	Contig	Santa Clara University	SAMN05608029	GCA_001881155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/155/GCA_001881155.1_ASM188115v1	-	USVAST184
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36133	65.6	-	CHJC01	82	4288	4058	4/21/15	3/12/17	Scaffold	SC	SAMEA1707460	GCA_001390215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/215/GCA_001390215.1_8939_3_41	-	2342X
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05727	39.6	-	CLKF01	46	2283	2037	3/21/15	3/11/17	Scaffold	SC	SAMEA1028978	GCA_001150865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/865/GCA_001150865.1_6925_8_9	-	SMRU2529
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.11017	39.6	-	CLMD01	61	2333	2116	3/21/15	3/10/17	Scaffold	SC	SAMEA1029150	GCA_001150925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/925/GCA_001150925.1_6938_6_6	-	SMRU2670
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35039	65.6	-	CPBU01	85	4258	4066	3/23/15	3/12/17	Scaffold	SC	SAMEA1707464	GCA_001390235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/235/GCA_001390235.1_8898_8_53	-	2267Q
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.28116	50.5	-	MKJQ01	76	5628	5175	11/17/16	4/6/17	Contig	Santa Clara University	SAMN05608032	GCA_001881165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/165/GCA_001881165.1_ASM188116v1	-	USVAST267
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83258	52.1	-	MYMA01	362	4885	4582	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358510	GCA_002054805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/805/GCA_002054805.1_ASM205480v1	-	BCW_5010
Staphylococcus aureus DAR5864	1422313	PRJNA228403	228403	Terrabacteria group	Firmicutes	2.85108	32.8	-	JFRI01	79	2991	2808	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403863	GCA_000596365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/365/GCA_000596365.1_Stap_aure_DAR5864_V1	-	DAR5864
Staphylococcus aureus DAR5865	1422312	PRJNA228402	228402	Terrabacteria group	Firmicutes	2.84366	32.8	-	JFRJ01	98	2984	2804	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403862	GCA_000596385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/385/GCA_000596385.1_Stap_aure_DAR5865_V1	-	DAR5865
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.67002	52.2	-	MYLW01	53	4755	4500	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358516	GCA_002054815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/815/GCA_002054815.1_ASM205481v1	-	BCW_5038
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.21097	50.6	-	MKJS01	34	5455	5051	11/17/16	4/6/17	Contig	Santa Clara University	SAMN05608037	GCA_001881205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/205/GCA_001881205.1_ASM188120v1	-	USVAST406
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36137	65.6	-	CPJA01	73	4282	4039	3/23/15	3/12/17	Scaffold	SC	SAMEA1707466	GCA_001390255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/255/GCA_001390255.1_8987_5_41	-	2601D
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.06464	39.7	-	CKZC01	54	2269	2051	3/21/15	3/10/17	Scaffold	SC	SAMEA1025925	GCA_001151085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/085/GCA_001151085.1_6840_1_22	-	SMRU1774
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.14545	39.6	-	CMUV01	143	2283	2001	3/23/15	3/10/17	Scaffold	SC	SAMEA1022838	GCA_001151105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/105/GCA_001151105.1_5737_7_9	-	173
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34735	65.6	-	CPES01	86	4268	4062	3/23/15	3/12/17	Scaffold	SC	SAMEA1707467	GCA_001390275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/275/GCA_001390275.1_8939_3_51	-	2373F
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.12866	50.6	-	MKIX01	37	5383	5023	11/17/16	4/6/17	Contig	Santa Clara University	SAMN05607952	GCA_001881225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/225/GCA_001881225.1_ASM188122v1	-	SF-491
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.18465	51.8	-	MYMD01	457	5338	4981	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358506	GCA_002054865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/865/GCA_002054865.1_ASM205486v1	-	BCW_4992
Staphylococcus aureus DAR5867	1422311	PRJNA228401	228401	Terrabacteria group	Firmicutes	2.83823	32.8	-	JFRK01	82	3010	2798	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403861	GCA_000596405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/405/GCA_000596405.1_Stap_aure_DAR5867_V1	-	DAR5867
Staphylococcus aureus DAR3515	1422119	PRJNA228200	228200	Terrabacteria group	Firmicutes	2.88811	32.8	-	JFRL01	32	3049	2887	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403669	GCA_000596425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/425/GCA_000596425.1_Stap_aure_DAR3515_V1	-	DAR3515
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.14252	51.8	-	MYME01	298	5280	4920	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358503	GCA_002054875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/875/GCA_002054875.1_ASM205487v1	-	BCW_4989
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.12984	50.7	-	MKIY01	57	5400	4981	11/17/16	4/6/17	Contig	Santa Clara University	SAMN05607984	GCA_001881235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/235/GCA_001881235.1_ASM188123v1	-	SF-495
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38887	65.6	-	CPDW01	71	4296	4090	3/23/15	3/12/17	Scaffold	SC	SAMEA1707470	GCA_001390295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/295/GCA_001390295.1_8939_3_23	-	2493L
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.04705	39.5	-	CLBA01	61	2239	2028	3/21/15	3/4/17	Scaffold	SC	SAMEA1025522	GCA_001151245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/245/GCA_001151245.1_6841_7_3	-	SMRU1323
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08938	39.6	-	CKOT01	66	2284	2035	3/21/15	3/15/17	Scaffold	SC	SAMEA1024714	GCA_001151385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/385/GCA_001151385.1_6680_4_16	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35091	65.6	-	CPFY01	76	4275	4063	3/23/15	3/12/17	Scaffold	SC	SAMEA1707471	GCA_001390315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/315/GCA_001390315.1_8939_3_93	-	2472N
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.02754	50.6	-	MKJA01	32	5241	4908	11/17/16	4/6/17	Contig	Santa Clara University	SAMN05607986	GCA_001881245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/245/GCA_001881245.1_ASM188124v1	-	SF-518
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.31216	52	-	MYMF01	1204	5634	5061	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358502	GCA_002054905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/905/GCA_002054905.1_ASM205490v1	-	BCW_4988
Staphylococcus aureus DAR3512	1422118	PRJNA228199	228199	Terrabacteria group	Firmicutes	2.91896	32.8	-	JFRM01	55	3090	2919	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403668	GCA_000596445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/445/GCA_000596445.1_Stap_aure_DAR3512_V1	-	DAR3512
Staphylococcus aureus DAR3508	1422117	PRJNA228198	228198	Terrabacteria group	Firmicutes	2.87524	32.8	-	JFRN01	44	3029	2856	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403667	GCA_000596465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/465/GCA_000596465.1_Stap_aure_DAR3508_V1	-	DAR3508
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.76931	52.1	-	MYMH01	243	4801	4521	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358500	GCA_002054925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/925/GCA_002054925.1_ASM205492v1	-	BCW_4986
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.15462	50.7	-	MKJC01	47	5392	5019	11/17/16	4/6/17	Contig	Santa Clara University	SAMN05607988	GCA_001881275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/275/GCA_001881275.1_ASM188127v1	-	SF-523
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37347	65.6	-	CPDV01	77	4294	4081	3/23/15	3/12/17	Scaffold	SC	SAMEA1707473	GCA_001390335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/335/GCA_001390335.1_8939_3_24	-	2507B
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11203	39.7	-	CRPF01	76	2339	2125	3/22/15	3/4/17	Scaffold	SC	SAMEA1024676	GCA_001151445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/445/GCA_001151445.1_6775_1_10	-	SMRU826
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09463	39.6	-	CQUR01	59	2284	2034	3/22/15	3/4/17	Scaffold	SC	SAMEA1025621	GCA_001151465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/465/GCA_001151465.1_6710_6_23	-	SMRU1367
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35763	65.6	-	CPET01	90	4286	4065	3/23/15	3/12/17	Scaffold	SC	SAMEA1707477	GCA_001390355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/355/GCA_001390355.1_8939_3_52	-	2393C
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.09232	50.6	-	MKJD01	24	5317	4976	11/17/16	4/6/17	Contig	Santa Clara University	SAMN05607989	GCA_001881305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/305/GCA_001881305.1_ASM188130v1	-	SF-560
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.35514	51.9	-	MYML01	1860	5580	4898	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358496	GCA_002054935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/935/GCA_002054935.1_ASM205493v1	-	BCW_4961
Staphylococcus aureus DAR3507	1422116	PRJNA228197	228197	Terrabacteria group	Firmicutes	2.88216	32.8	-	JFRO01	66	3038	2860	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403666	GCA_000596485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/485/GCA_000596485.1_Stap_aure_DAR3507_V1	-	DAR3507
Staphylococcus aureus DAR3505	1422115	PRJNA228196	228196	Terrabacteria group	Firmicutes	2.82819	32.8	-	JFRP01	33	2967	2800	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403665	GCA_000596505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/505/GCA_000596505.1_Stap_aure_DAR3505_V1	-	DAR3505
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.95358	52.1	-	MYMO01	54	5156	4843	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358493	GCA_002054965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/965/GCA_002054965.1_ASM205496v1	-	BCW_4958
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.09638	50.6	-	MKJE01	26	5315	4973	11/17/16	4/6/17	Contig	Santa Clara University	SAMN05607990	GCA_001881315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/315/GCA_001881315.1_ASM188131v1	-	SF-567
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35166	65.6	-	CPDU01	57	4260	4062	3/23/15	3/12/17	Scaffold	SC	SAMEA1707478	GCA_001390375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/375/GCA_001390375.1_8939_3_20	-	2388X
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12716	39.5	-	CQVY01	52	2373	2122	3/23/15	3/4/17	Scaffold	SC	SAMEA1025587	GCA_001151525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/525/GCA_001151525.1_6710_8_19	-	SMRU1411
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.16648	39.5	-	CKVV01	62	2425	2160	3/21/15	3/4/17	Scaffold	SC	SAMEA1026079	GCA_001151585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/585/GCA_001151585.1_6823_4_6	-	SMRU1926
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35372	65.6	-	CPFW01	80	4274	4058	3/22/15	3/12/17	Scaffold	SC	SAMEA1707479	GCA_001390395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/395/GCA_001390395.1_8939_3_90	-	2365X
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.29782	50.6	-	MKJG01	51	5639	5232	11/17/16	4/6/17	Contig	Santa Clara University	SAMN05607992	GCA_001881345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/345/GCA_001881345.1_ASM188134v1	-	SF-596
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.77976	52	-	MYMP01	491	4783	4502	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358492	GCA_002054985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/985/GCA_002054985.1_ASM205498v1	-	BCW_4957
Staphylococcus aureus DAR3504	1422114	PRJNA228195	228195	Terrabacteria group	Firmicutes	2.86923	32.7	-	JFRQ01	50	3028	2856	3/11/14	3/3/17	Contig	Broad Institute	SAMN02403664	GCA_000596525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/525/GCA_000596525.1_Stap_aure_DAR3504_V1	-	DAR3504
Staphylococcus aureus T70944	1417036	PRJNA226787	226787	Terrabacteria group	Firmicutes	2.89995	32.7	-	JETY01	11	3079	2923	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398728	GCA_000596545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/545/GCA_000596545.1_Stap_aure_T70944_V1	-	T70944
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.06321	51.9	-	MYNA01	607	5194	4807	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358481	GCA_002055025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/025/GCA_002055025.1_ASM205502v1	-	BCW_4946
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.14115	50.6	-	MKJF01	26	5387	5046	11/17/16	4/6/17	Contig	Santa Clara University	SAMN05607991	GCA_001881355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/355/GCA_001881355.1_ASM188135v1	-	SF-572
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37592	65.6	-	CPJC01	59	4289	4061	3/23/15	3/12/17	Scaffold	SC	SAMEA1707480	GCA_001390415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/415/GCA_001390415.1_8987_5_43	-	2626F
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.1245	39.6	-	CRLX01	86	2357	2105	3/23/15	3/6/17	Scaffold	SC	SAMEA1025076	GCA_001151625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/625/GCA_001151625.1_6755_2_14	-	SMRU806
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.06258	39.7	-	CPRL01	180	2229	2049	3/23/15	3/4/17	Scaffold	SC	SAMEA682430	GCA_001151705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/705/GCA_001151705.1_5366_3_5	-	08B03587
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36402	65.6	-	CPEU01	74	4271	4078	3/22/15	3/12/17	Scaffold	SC	SAMEA1707482	GCA_001390435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/435/GCA_001390435.1_8939_3_53	-	2440D
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.07307	50.6	-	MKJI01	22	5287	4963	11/17/16	4/6/17	Contig	Santa Clara University	SAMN05607995	GCA_001881385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/385/GCA_001881385.1_ASM188138v1	-	SF-095
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.28469	51.9	-	MYNB01	1349	5547	4964	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358480	GCA_002055035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/035/GCA_002055035.1_ASM205503v1	-	BCW_4945
Staphylococcus aureus F63704	1417040	PRJNA226791	226791	Terrabacteria group	Firmicutes	2.85514	32.8	-	JETZ01	33	2979	2853	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398732	GCA_000596565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/565/GCA_000596565.1_Stap_aure_F63704_V1	-	F63704
Staphylococcus aureus T74005	1417046	PRJNA226797	226797	Terrabacteria group	Firmicutes	2.81009	32.7	-	JEUA01	40	2915	2772	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398738	GCA_000596585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/585/GCA_000596585.1_Stap_aure_T74005_V1	-	T74005
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.65623	52.2	-	MYNC01	76	4732	4486	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358479	GCA_002055055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/055/GCA_002055055.1_ASM205505v1	-	BCW_4944
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.16986	50.6	-	MKJL01	43	5430	5066	11/17/16	4/6/17	Contig	Santa Clara University	SAMN05608024	GCA_001881395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/395/GCA_001881395.1_ASM188139v1	-	MVAST0176
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.42161	65.6	-	CPJB01	71	4319	4103	3/23/15	3/12/17	Scaffold	SC	SAMEA1707487	GCA_001390455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/455/GCA_001390455.1_8987_5_42	-	2625E
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.08469	39.5	-	CMGG01	53	2278	2048	3/23/15	3/4/17	Scaffold	SC	SAMEA1029245	GCA_001151745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/745/GCA_001151745.1_7038_4_2	-	SMRU2930
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.02641	39.7	-	CPTL01	76	2202	2024	3/23/15	3/4/17	Scaffold	SC	SAMEA682505	GCA_001151765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/765/GCA_001151765.1_5366_5_9	-	08B06461
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35535	65.6	-	CPFU01	81	4274	4061	3/22/15	3/12/17	Scaffold	SC	SAMEA1707488	GCA_001390475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/475/GCA_001390475.1_8939_3_91	-	2382Q
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.29663	50.6	-	MKJM01	63	5613	5147	11/17/16	4/6/17	Contig	Santa Clara University	SAMN05608025	GCA_001881425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/425/GCA_001881425.1_ASM188142v1	-	MVAST0234
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70886	52.2	-	MYNJ01	35	4797	4570	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358472	GCA_002055075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/075/GCA_002055075.1_ASM205507v1	-	BCW_4937
Staphylococcus aureus T74154	1417047	PRJNA226798	226798	Terrabacteria group	Firmicutes	2.94112	32.8	-	JEUB01	18	3124	2957	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398739	GCA_000596605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/605/GCA_000596605.1_Stap_aure_T74154_V1	-	T74154
Staphylococcus aureus T74060	1417048	PRJNA226799	226799	Terrabacteria group	Firmicutes	2.89381	32.7	-	JEUC01	13	3042	2887	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398740	GCA_000596625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/625/GCA_000596625.1_Stap_aure_T74060_V1	-	T74060
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.62042	52.2	-	MYNQ01	52	4668	4435	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358464	GCA_002055115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/115/GCA_002055115.1_ASM205511v1	-	BCW_4929
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.15041	50.7	-	MKJP01	54	5389	4987	11/17/16	4/6/17	Contig	Santa Clara University	SAMN05608030	GCA_001881435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/435/GCA_001881435.1_ASM188143v1	-	USVAST245
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35662	65.6	-	CPHX01	94	4282	4067	3/23/15	3/12/17	Scaffold	SC	SAMEA1707494	GCA_001390515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/515/GCA_001390515.1_8987_4_83	-	0366Z
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	1.98358	39.8	-	CKYH01	403	2354	1880	3/21/15	3/11/17	Scaffold	SC	SAMEA1025194	GCA_001151885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/885/GCA_001151885.1_6830_3_10	-	SMRU1642
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.05236	39.7	-	CRDV01	101	2239	2044	3/23/15	3/11/17	Scaffold	SC	SAMEA1024812	GCA_001151965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/965/GCA_001151965.1_6731_4_5	-	SMRU1061
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38229	65.6	-	CPFQ01	70	4290	4080	3/23/15	3/12/17	Scaffold	SC	SAMEA1707496	GCA_001390535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/535/GCA_001390535.1_8939_3_88	-	2517M
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.17653	50.6	-	MKJR01	59	5448	5010	11/17/16	4/6/17	Contig	Santa Clara University	SAMN05608033	GCA_001881465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/465/GCA_001881465.1_ASM188146v1	-	USVAST356
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.68874	52.2	-	MYNU01	78	4735	4494	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358460	GCA_002055135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/135/GCA_002055135.1_ASM205513v1	-	BCW_4925
Staphylococcus aureus T74141	1417051	PRJNA226802	226802	Terrabacteria group	Firmicutes	2.89192	32.7	-	JEUD01	12	3047	2890	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398743	GCA_000596645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/645/GCA_000596645.1_Stap_aure_T74141_V1	-	T74141
Staphylococcus aureus F63730	1417053	PRJNA226804	226804	Terrabacteria group	Firmicutes	2.82616	32.7	-	JEUE01	13	2975	2821	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398745	GCA_000596665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/665/GCA_000596665.1_Stap_aure_F63730_V1	-	F63730
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.65383	52.3	-	MYOE01	42	4699	4484	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358450	GCA_002055155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/155/GCA_002055155.1_ASM205515v1	-	BCW_4915
Escherichia coli	562	PRJNA352562	352562	Proteobacteria	Gammaproteobacteria	4.88767	50.7	-	MPAY01	122	5127	4828	11/17/16	2/25/17	Contig	University of Florida	SAMN05982262	GCA_001881505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/505/GCA_001881505.1_ASM188150v1	-	KG-8
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37237	65.6	-	CPJE01	63	4283	4072	3/23/15	3/12/17	Scaffold	SC	SAMEA1707498	GCA_001390555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/555/GCA_001390555.1_8987_5_45	-	2634P
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.1266	39.5	-	CMRZ01	37	2330	2098	3/23/15	3/10/17	Scaffold	SC	SAMEA2062386	GCA_001152005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/005/GCA_001152005.1_9803_8_59	-	23F
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.05195	39.6	-	CKAC01	60	2245	1999	3/21/15	3/10/17	Scaffold	SC	SAMEA974671	GCA_001152025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/025/GCA_001152025.1_6259_6_10	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34987	65.6	-	CPFS01	72	4261	4056	3/23/15	3/12/17	Scaffold	SC	SAMEA1707504	GCA_001390575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/575/GCA_001390575.1_8939_3_89	-	2349E
Escherichia coli	562	PRJNA352562	352562	Proteobacteria	Gammaproteobacteria	4.85398	50.9	-	MPDS02	174	5067	4749	11/17/16	2/26/17	Contig	University of Florida	SAMN05994979	GCA_001881595.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/595/GCA_001881595.3_ASM188159v3	-	KG-10
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.67795	52.2	-	MYOH01	77	4759	4441	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358447	GCA_002055175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/175/GCA_002055175.1_ASM205517v1	-	BCW_4912
Staphylococcus aureus H32126	1417056	PRJNA226807	226807	Terrabacteria group	Firmicutes	2.93513	32.7	-	JEUF01	25	3119	2959	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398748	GCA_000596685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/685/GCA_000596685.1_Stap_aure_H32126_V1	-	H32126
Staphylococcus aureus M32688	1417064	PRJNA226815	226815	Terrabacteria group	Firmicutes	2.9228	32.7	-	JEUG01	13	3091	2940	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398756	GCA_000596705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/705/GCA_000596705.1_Stap_aure_M32688_V1	-	M32688
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.88875	51.9	-	MYOI01	95	5000	4735	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358446	GCA_002055195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/195/GCA_002055195.1_ASM205519v1	-	BCW_4911
Escherichia coli	562	PRJNA352562	352562	Proteobacteria	Gammaproteobacteria	4.87932	50.8	-	MPBF01	155	5113	4813	11/17/16	2/25/17	Contig	University of Florida	SAMN05991790	GCA_001881605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/605/GCA_001881605.1_ASM188160v1	-	KG-24
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35567	65.6	-	CPEN01	87	4281	4060	3/23/15	3/12/17	Scaffold	SC	SAMEA1707505	GCA_001390595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/595/GCA_001390595.1_8939_3_47	-	2497Q
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.18521	39.4	-	CKFN01	91	2391	2141	3/21/15	3/10/17	Scaffold	SC	SAMEA1023799	GCA_001152065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/065/GCA_001152065.1_6630_3_24	-	6A
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.12583	39.7	-	CMTF01	62	2289	1987	3/22/15	3/10/17	Scaffold	SC	SAMEA1022813	GCA_001152125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/125/GCA_001152125.1_5737_2_1	-	375
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35221	65.6	-	CPBH01	85	4276	4068	3/23/15	3/12/17	Scaffold	SC	SAMEA1707507	GCA_001390615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/615/GCA_001390615.1_8898_8_37	-	2257E
Escherichia coli	562	PRJNA352562	352562	Proteobacteria	Gammaproteobacteria	5.14572	50.6	-	MPDR01	135	5418	5074	11/17/16	2/25/17	Contig	University of Florida	SAMN06004908	GCA_001881645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/645/GCA_001881645.1_ASM188164v1	-	KG-16
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.8611	52.2	-	MYOO01	72	5004	4766	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358439	GCA_002055205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/205/GCA_002055205.1_ASM205520v1	-	BCW_4904
Staphylococcus aureus W60060	1417067	PRJNA226818	226818	Terrabacteria group	Firmicutes	2.90932	32.7	-	JEUH01	17	3069	2908	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398759	GCA_000596725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/725/GCA_000596725.1_Stap_aure_W60060_V1	-	W60060
Staphylococcus aureus H35283	1417068	PRJNA226819	226819	Terrabacteria group	Firmicutes	2.93899	32.7	-	JEUI01	16	3106	2949	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398760	GCA_000596745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/745/GCA_000596745.1_Stap_aure_H35283_V1	-	H35283
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.63881	52.3	-	MYOR01	48	4675	4455	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358436	GCA_002055235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/235/GCA_002055235.1_ASM205523v1	-	BCW_4901
Escherichia coli	562	PRJNA352562	352562	Proteobacteria	Gammaproteobacteria	4.84794	50.6	-	MPDQ01	125	5067	4754	11/17/16	2/25/17	Contig	University of Florida	SAMN06005637	GCA_001881665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/665/GCA_001881665.1_ASM188166v1	-	KG-5
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.39757	65.6	-	CPJD01	81	4310	4050	3/23/15	3/12/17	Scaffold	SC	SAMEA1707508	GCA_001390635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/635/GCA_001390635.1_8987_5_44	-	2631L
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.16326	39.5	-	CLFR01	81	2413	2162	3/21/15	3/10/17	Scaffold	SC	SAMEA1026169	GCA_001152165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/165/GCA_001152165.1_6925_3_18	-	SMRU2130
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.19154	39.5	-	CLMN01	72	2430	2213	3/21/15	3/11/17	Scaffold	SC	SAMEA1028745	GCA_001152285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/285/GCA_001152285.1_6938_7_12	-	SMRU2700
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.4088	65.6	-	CPHU01	72	4314	4075	3/22/15	3/12/17	Scaffold	SC	SAMEA1707509	GCA_001390655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/655/GCA_001390655.1_8987_4_80	-	1376X
Escherichia coli	562	PRJNA342393	342393	Proteobacteria	Gammaproteobacteria	5.36413	50.5	-	MINC01	15	5589	5207	11/20/16	2/25/17	Contig	Public Health England	SAMN05756206	GCA_001884785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/785/GCA_001884785.1_ASM188478v1	-	122262
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.78811	51.9	-	MYOS01	52	4851	4603	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358435	GCA_002055255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/255/GCA_002055255.1_ASM205525v1	-	BCW_4900
Staphylococcus aureus F70051	1417070	PRJNA226821	226821	Terrabacteria group	Firmicutes	2.87693	32.7	-	JEUJ01	52	3029	2873	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398762	GCA_000596765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/765/GCA_000596765.1_Stap_aure_F70051_V1	-	F70051
Staphylococcus aureus W57390	1417073	PRJNA226824	226824	Terrabacteria group	Firmicutes	2.87571	32.7	-	JEUK01	26	3016	2884	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398765	GCA_000596785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/785/GCA_000596785.1_Stap_aure_W57390_V1	-	W57390
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69725	52.2	-	MYOZ01	80	4810	4551	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358428	GCA_002055275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/275/GCA_002055275.1_ASM205527v1	-	BCW_4893
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.40625	50.4	-	MPGV01	411	5888	5396	11/21/16	2/26/17	Contig	US Food and Drug Administration	SAMN04096900	GCA_001884865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/865/GCA_001884865.1_ASM188486v1	-	JEONG-1234
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36444	65.6	-	CPEQ01	70	4275	4080	3/23/15	3/12/17	Scaffold	SC	SAMEA1707512	GCA_001390675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/675/GCA_001390675.1_8939_3_49	-	2343Y
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.0517	39.6	-	CKBU01	74	2259	2053	3/21/15	3/10/17	Scaffold	SC	SAMEA974638	GCA_001152305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/305/GCA_001152305.1_6259_8_3	-	11A
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.1412	39.6	-	CKRY01	40	2383	2141	3/21/15	3/10/17	Scaffold	SC	SAMEA1023882	GCA_001152325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/325/GCA_001152325.1_6680_8_22	-	SMRU214
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35424	65.6	-	CPDX01	76	4272	4059	3/23/15	3/12/17	Scaffold	SC	SAMEA1707513	GCA_001390695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/695/GCA_001390695.1_8939_3_25	-	2340V
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.41448	50.4	-	MPHB01	375	5896	5389	11/21/16	2/26/17	Contig	US Food and Drug Administration	SAMN04191557	GCA_001884875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/875/GCA_001884875.1_ASM188487v1	-	KCJ1268
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7666	52	-	MYOX01	80	4825	4582	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358430	GCA_002055285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/285/GCA_002055285.1_ASM205528v1	-	BCW_4895
Staphylococcus aureus W62934	1417077	PRJNA226828	226828	Terrabacteria group	Firmicutes	2.89001	32.7	-	JEUL01	15	3050	2891	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398769	GCA_000596805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/805/GCA_000596805.1_Stap_aure_W62934_V1	-	W62934
Staphylococcus aureus M39260	1417083	PRJNA226834	226834	Terrabacteria group	Firmicutes	2.88713	32.8	-	JEUM01	57	3049	2881	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398775	GCA_000596825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/825/GCA_000596825.1_Stap_aure_M39260_V1	-	M39260
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.65678	52.3	-	MYPA01	40	4687	4457	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358427	GCA_002055315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/315/GCA_002055315.1_ASM205531v1	-	BCW_4892
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.38456	50.5	-	MPGY01	486	5872	5370	11/21/16	2/25/17	Contig	US Food and Drug Administration	SAMN04191555	GCA_001884885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/885/GCA_001884885.1_ASM188488v1	-	KCJ1244
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37503	65.6	-	CPJH01	67	4287	4062	3/23/15	3/12/17	Scaffold	SC	SAMEA1707514	GCA_001390715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/715/GCA_001390715.1_8987_5_48	-	2642Y
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21104	39.6	-	CPKV01	89	2462	2204	3/22/15	3/10/17	Scaffold	SC	SAMEA1408297	GCA_001152365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/365/GCA_001152365.1_7444_8_28	-	9809+25147
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11371	39.5	-	CRAL01	56	2338	2107	3/23/15	3/11/17	Scaffold	SC	SAMEA1024669	GCA_001152585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/585/GCA_001152585.1_6730_6_8	-	SMRU680
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36192	65.6	-	CPEO01	80	4294	4061	3/22/15	3/12/17	Scaffold	SC	SAMEA1707516	GCA_001390735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/735/GCA_001390735.1_8939_3_48	-	2512G
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.33783	50.6	-	MPGX01	572	5820	5316	11/21/16	2/25/17	Contig	US Food and Drug Administration	SAMN04191554	GCA_001884895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/895/GCA_001884895.1_ASM188489v1	-	KCJ1242
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.68526	52.2	-	MYPB01	82	4818	4488	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358426	GCA_002055335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/335/GCA_002055335.1_ASM205533v1	-	BCW_4891
Staphylococcus aureus M39274	1417084	PRJNA226835	226835	Terrabacteria group	Firmicutes	2.88649	32.7	-	JEUN01	63	3000	2853	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398776	GCA_000596845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/845/GCA_000596845.1_Stap_aure_M39274_V1	-	M39274
Staphylococcus aureus T83715	1417088	PRJNA226839	226839	Terrabacteria group	Firmicutes	2.80413	32.8	-	JEUO01	33	2939	2759	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398780	GCA_000596865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/865/GCA_000596865.1_Stap_aure_T83715_V1	-	T83715
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.64494	52.3	-	MYPE01	66	4709	4468	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358423	GCA_002055345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/345/GCA_002055345.1_ASM205534v1	-	BCW_4888
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.40628	50.3	-	MPGW01	296	5896	5403	11/21/16	2/26/17	Contig	US Food and Drug Administration	SAMN04335043	GCA_001884945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/945/GCA_001884945.1_ASM188494v1	-	KCJ1237
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36019	65.6	-	CPHW01	82	4276	4065	3/23/15	3/12/17	Scaffold	SC	SAMEA1707518	GCA_001390755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/755/GCA_001390755.1_8987_4_81	-	0054K
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.00564	39.7	-	CKKZ01	41	2206	1987	3/21/15	3/10/17	Scaffold	SC	SAMEA1023891	GCA_001152645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/645/GCA_001152645.1_6631_7_24	-	28F
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09452	39.6	-	CJZY01	53	2293	2050	3/21/15	3/10/17	Scaffold	SC	SAMEA974693	GCA_001152725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/725/GCA_001152725.1_6259_5_5	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35652	65.6	-	CPCD01	59	4267	4073	3/22/15	3/12/17	Scaffold	SC	SAMEA1707519	GCA_001390775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/775/GCA_001390775.1_8898_8_62	-	2291R
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.39096	50.4	-	MPHD01	352	5887	5393	11/21/16	2/26/17	Contig	US Food and Drug Administration	SAMN04335042	GCA_001884955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/955/GCA_001884955.1_ASM188495v1	-	KCJ1231
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.61401	52.3	-	MYPD01	53	4673	4432	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358424	GCA_002055375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/375/GCA_002055375.1_ASM205537v1	-	BCW_4889
Staphylococcus aureus W65865	1417090	PRJNA226841	226841	Terrabacteria group	Firmicutes	2.89531	32.7	-	JEUP01	18	3060	2897	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398782	GCA_000596885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/885/GCA_000596885.1_Stap_aure_W65865_V1	-	W65865
Staphylococcus aureus H41070	1417092	PRJNA226843	226843	Terrabacteria group	Firmicutes	2.93686	32.7	-	JEUQ01	17	3120	2962	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398784	GCA_000596905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/905/GCA_000596905.1_Stap_aure_H41070_V1	-	H41070
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70438	52.2	-	MYPF01	38	4785	4545	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358422	GCA_002055395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/395/GCA_002055395.1_ASM205539v1	-	BCW_4887
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.40648	50.3	-	MPHC01	258	5884	5407	11/21/16	2/26/17	Contig	US Food and Drug Administration	SAMN04335044	GCA_001884965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/965/GCA_001884965.1_ASM188496v1	-	KCJ1238
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36504	65.6	-	CPJG01	73	4292	4055	3/23/15	3/12/17	Scaffold	SC	SAMEA1707524	GCA_001390795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/795/GCA_001390795.1_8987_5_47	-	2639V
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.03635	39.6	-	CREG01	56	2234	2008	3/23/15	3/4/17	Scaffold	SC	SAMEA1024862	GCA_001152765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/765/GCA_001152765.1_6731_5_19	-	SMRU1099
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21616	39.5	-	CPMK01	95	2457	2221	3/22/15	3/4/17	Scaffold	SC	SAMEA1408246	GCA_001152785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/785/GCA_001152785.1_7444_8_3	-	9601+30166
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35445	65.6	-	CPER01	82	4278	4057	3/23/15	3/12/17	Scaffold	SC	SAMEA1707526	GCA_001390815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/815/GCA_001390815.1_8939_3_50	-	2360R
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.41681	50.3	-	MPGZ01	286	5869	5398	11/21/16	2/26/17	Contig	US Food and Drug Administration	SAMN04335045	GCA_001884975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/884/975/GCA_001884975.1_ASM188497v1	-	KCJ1252
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.5335	52.2	-	MYPG01	45	4566	4338	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358404	GCA_002055405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/405/GCA_002055405.1_ASM205540v1	-	BCW_4866
Staphylococcus aureus H41109	1417094	PRJNA226845	226845	Terrabacteria group	Firmicutes	2.94316	32.7	-	JEUR01	17	3126	2957	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398786	GCA_000596925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/925/GCA_000596925.1_Stap_aure_H41109_V1	-	H41109
Staphylococcus aureus F76239	1417096	PRJNA226847	226847	Terrabacteria group	Firmicutes	2.93915	32.8	-	JEUS01	19	3099	2964	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398788	GCA_000596945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/945/GCA_000596945.1_Stap_aure_F76239_V1	-	F76239
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.64674	52.2	-	MYPH01	46	4737	4482	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358403	GCA_002055415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/415/GCA_002055415.1_ASM205541v1	-	BCW_4865
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.43393	50.4	-	MPHA01	380	5910	5416	11/21/16	2/25/17	Contig	US Food and Drug Administration	SAMN04191556	GCA_001885025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/025/GCA_001885025.1_ASM188502v1	-	KCJ1265
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37792	65.6	-	CPJF01	68	4280	4062	3/23/15	3/12/17	Scaffold	SC	SAMEA1707527	GCA_001390835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/835/GCA_001390835.1_8987_5_46	-	2636R
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.15476	39.5	-	CMMM01	46	2367	2128	3/22/15	3/4/17	Scaffold	SC	SAMEA1029395	GCA_001152805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/805/GCA_001152805.1_7068_4_22	-	SMRU3142
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04765	39.5	-	CKAL01	42	2226	2006	3/21/15	3/4/17	Scaffold	SC	SAMEA974650	GCA_001152905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/905/GCA_001152905.1_6259_6_5	-	48
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35774	65.6	-	CPBG01	80	4267	4067	3/22/15	3/12/17	Scaffold	SC	SAMEA1707529	GCA_001390855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/855/GCA_001390855.1_8898_8_35	-	2202V
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.27536	50.6	-	MOHE01	137	5557	5210	12/8/16	2/25/17	Contig	"College of Veterinary Medicine,China Agricultural University"	SAMN05928912	GCA_001892045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/045/GCA_001892045.1_ASM189204v1	-	468
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.63492	52.2	-	MYPI01	49	4718	4458	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358402	GCA_002055425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/425/GCA_002055425.1_ASM205542v1	-	BCW_4864
Staphylococcus aureus H43996	1417102	PRJNA226853	226853	Terrabacteria group	Firmicutes	2.89539	32.7	-	JEUT01	14	3054	2891	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398794	GCA_000596965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/965/GCA_000596965.1_Stap_aure_H43996_V1	-	H43996
Staphylococcus aureus W70659	1417112	PRJNA226863	226863	Terrabacteria group	Firmicutes	2.91386	32.7	-	JEUU01	18	3090	2935	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398804	GCA_000596985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/596/985/GCA_000596985.1_Stap_aure_W70659_V1	-	W70659
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.79935	52.1	-	MYPO01	60	4912	4651	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358396	GCA_002055475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/475/GCA_002055475.1_ASM205547v1	-	BCW_4858
Escherichia coli	562	PRJNA352696	352696	Proteobacteria	Gammaproteobacteria	5.63225	50.8	-	MPGQ01	3	5838	5439	12/14/16	2/26/17	Contig	"University of Zurich, Vetsuisse Faculty"	SAMN05954725	GCA_001902655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/655/GCA_001902655.1_ASM190265v1	-	N11-1317
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36501	65.6	-	CPFT01	80	4279	4070	3/23/15	3/12/17	Scaffold	SC	SAMEA1707530	GCA_001390875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/875/GCA_001390875.1_8939_3_87	-	2502W
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.18041	39.5	-	CKJP01	76	2422	2174	3/21/15	3/4/17	Scaffold	SC	SAMEA1023858	GCA_001152965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/965/GCA_001152965.1_6631_5_4	-	19B
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.02633	39.7	-	CPPL01	72	2202	2031	3/22/15	3/4/17	Scaffold	SC	SAMEA682475	GCA_001152985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/985/GCA_001152985.1_5366_5_2	-	08B05607
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35097	65.6	-	CPBL01	85	4275	4072	3/23/15	3/12/17	Scaffold	SC	SAMEA1707532	GCA_001390895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/895/GCA_001390895.1_8898_8_41	-	1535V
Escherichia coli	562	PRJNA352702	352702	Proteobacteria	Gammaproteobacteria	5.78507	50.8021	plasmid unnamed:NZ_CM007609.1/CM007609.1	MPGR01	3	6180	5728	12/14/16	2/26/17	Contig	"University of Zurich, Vetsuisse Faculty"	SAMN05954726	GCA_001902675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/675/GCA_001902675.1_ASM190267v1	-	453
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80492	52.1	-	MYPW01	88	4921	4654	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358388	GCA_002055495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/495/GCA_002055495.1_ASM205549v1	-	BCW_4850
Staphylococcus aureus H47169	1417117	PRJNA226868	226868	Terrabacteria group	Firmicutes	2.91943	32.7	-	JEUV01	18	3072	2909	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398809	GCA_000597005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/005/GCA_000597005.1_Stap_aure_H47169_V1	-	H47169
Staphylococcus aureus H47224	1417118	PRJNA226869	226869	Terrabacteria group	Firmicutes	2.83038	32.7	-	JEUW01	46	2927	2784	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398810	GCA_000597025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/025/GCA_000597025.1_Stap_aure_H47224_V1	-	H47224
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.78503	52.2	-	MYPY01	149	4857	4636	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358386	GCA_002055555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/555/GCA_002055555.1_ASM205555v1	-	BCW_4848
Escherichia coli	562	PRJNA352705	352705	Proteobacteria	Gammaproteobacteria	5.38234	50.7	-	MPGS01	4	5637	5228	12/14/16	2/26/17	Contig	"University of Zurich, Vetsuisse Faculty"	SAMN05954728	GCA_001902685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/685/GCA_001902685.1_ASM190268v1	-	117
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36583	65.6	-	CPGL01	73	4291	4051	3/22/15	3/12/17	Scaffold	SC	SAMEA1707533	GCA_001390915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/915/GCA_001390915.1_8987_4_30	-	0613S
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.98887	39.8	-	CQRD01	44	2206	1996	3/22/15	3/4/17	Scaffold	SC	SAMEA970274	GCA_001153045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/045/GCA_001153045.1_5159_7_5	-	BHN631
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.31747	39.5	-	CKDO01	112	2540	2251	3/21/15	3/4/17	Scaffold	SC	SAMEA1023974	GCA_001153145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/145/GCA_001153145.1_6630_1_14	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34879	65.6	-	CPBJ01	89	4272	4061	3/22/15	3/12/17	Scaffold	SC	SAMEA1707535	GCA_001390935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/935/GCA_001390935.1_8898_8_40	-	2325D
Escherichia coli	562	PRJNA352706	352706	Proteobacteria	Gammaproteobacteria	5.54302	50.6535	plasmid unnamed1:NZ_CM007610.1/CM007610.1; plasmid unnamed2:NZ_CM007611.1/CM007611.1	MPGT01	3	5820	5391	12/14/16	2/26/17	Contig	"University of Zurich, Vetsuisse Faculty"	SAMN05954729	GCA_001902735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/735/GCA_001902735.1_ASM190273v1	-	256
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.75687	52.2	-	MYPZ01	64	4836	4618	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358385	GCA_002055595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/595/GCA_002055595.1_ASM205559v1	-	BCW_4847
Staphylococcus aureus T12849	1417125	PRJNA226876	226876	Terrabacteria group	Firmicutes	2.82	32.8	-	JEUX01	34	2946	2790	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398817	GCA_000597045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/045/GCA_000597045.1_Stap_aure_T12849_V1	-	T12849
Staphylococcus aureus F85184	1417141	PRJNA226893	226893	Terrabacteria group	Firmicutes	2.89521	32.6	-	JEUY01	21	3056	2905	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398833	GCA_000597065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/065/GCA_000597065.1_Stap_aure_F85184_V1	-	F85184
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89477	52.1	-	MYQA01	94	5050	4767	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358384	GCA_002055645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/645/GCA_002055645.1_ASM205564v1	-	BCW_4846
Escherichia coli	562	PRJNA310955	310955	Proteobacteria	Gammaproteobacteria	4.99528	50.6	-	LSGB01	451	5463	4781	12/16/16	2/26/17	Contig	U.S. Food and Drug Administration	SAMN04457268	GCA_001907315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/315/GCA_001907315.1_ASM190731v1	27271741	EC10016
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3799	65.6	-	CPGP01	80	4287	4074	3/23/15	3/12/17	Scaffold	SC	SAMEA1707537	GCA_001390955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/955/GCA_001390955.1_8987_4_31	-	type strain: 0660
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10713	39.5	-	CRDA01	77	2330	2097	3/22/15	3/4/17	Scaffold	SC	SAMEA1024691	GCA_001153165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/165/GCA_001153165.1_6731_3_21	-	SMRU1053
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.18949	39.6	-	CIMG01	94	2465	2218	3/21/15	3/4/17	Scaffold	SC	SAMEA1023719	GCA_001153185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/185/GCA_001153185.1_6631_7_20	-	19B
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35701	65.6	-	CPGN01	64	4269	4068	3/22/15	3/12/17	Scaffold	SC	SAMEA1707538	GCA_001390975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/975/GCA_001390975.1_8987_4_32	-	1343L
Escherichia coli	562	PRJNA310955	310955	Proteobacteria	Gammaproteobacteria	5.09871	50.6	-	LSGC01	326	5433	4864	12/16/16	2/26/17	Contig	U.S. Food and Drug Administration	SAMN04457269	GCA_001907325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/325/GCA_001907325.1_ASM190732v1	27271741	ATM457
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80302	52.1	-	MYQB01	75	4918	4653	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358383	GCA_002055675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/675/GCA_002055675.1_ASM205567v1	-	BCW_4845
Staphylococcus aureus F85609	1417143	PRJNA226895	226895	Terrabacteria group	Firmicutes	2.97811	32.7	-	JEUZ01	18	3189	3037	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398835	GCA_000597085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/085/GCA_000597085.1_Stap_aure_F85609_V1	-	F85609
Staphylococcus aureus F89046	1417147	PRJNA226899	226899	Terrabacteria group	Firmicutes	2.89311	32.7	-	JEVA01	13	3042	2893	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398839	GCA_000597105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/105/GCA_000597105.1_Stap_aure_F89046_V1	-	F89046
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80373	52.1	-	MYQC01	82	4920	4653	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358382	GCA_002055715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/715/GCA_002055715.1_ASM205571v1	-	BCW_4844
Escherichia coli	562	PRJNA310955	310955	Proteobacteria	Gammaproteobacteria	5.01793	50.7	-	LSGF01	557	5488	4740	12/16/16	2/26/17	Contig	U.S. Food and Drug Administration	SAMN04457273	GCA_001907335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/335/GCA_001907335.1_ASM190733v1	27271741	ATM465
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34433	65.6	-	CPAV01	60	4261	4069	3/23/15	3/12/17	Scaffold	SC	SAMEA1707539	GCA_001390995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/390/995/GCA_001390995.1_8898_8_15	-	2303E
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12399	39.6	-	CMDL01	60	2344	2129	3/21/15	3/4/17	Scaffold	SC	SAMEA1028645	GCA_001153225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/225/GCA_001153225.1_7011_3_9	-	SMRU2745
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.98922	39.8	-	CKFF01	64	2178	1939	3/21/15	3/4/17	Scaffold	SC	SAMEA1024022	GCA_001153285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/285/GCA_001153285.1_6630_3_16	-	3
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35293	65.6	-	CPGI01	84	4271	4044	3/23/15	3/12/17	Scaffold	SC	SAMEA1707543	GCA_001391015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/015/GCA_001391015.1_8987_4_29	-	type strain: 0522
Escherichia coli	562	PRJNA310955	310955	Proteobacteria	Gammaproteobacteria	5.01196	50.6	-	LSGH01	491	5500	4737	12/16/16	2/26/17	Contig	U.S. Food and Drug Administration	SAMN04457275	GCA_001907375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/375/GCA_001907375.1_ASM190737v1	27271741	ATM459
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80502	52.1	-	MYQD01	77	4924	4657	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358381	GCA_002055755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/755/GCA_002055755.1_ASM205575v1	-	BCW_4843
Staphylococcus aureus F89062	1417149	PRJNA226901	226901	Terrabacteria group	Firmicutes	2.82668	32.7	-	JEVB01	8	2972	2821	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398841	GCA_000597125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/125/GCA_000597125.1_Stap_aure_F89062_V1	-	F89062
Staphylococcus aureus F89073	1417150	PRJNA226902	226902	Terrabacteria group	Firmicutes	2.88757	32.7	-	JEVC01	26	3037	2911	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398842	GCA_000597145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/145/GCA_000597145.1_Stap_aure_F89073_V1	-	F89073
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80457	52.1	-	MYPP01	76	4919	4653	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358395	GCA_002055775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/775/GCA_002055775.1_ASM205577v1	-	BCW_4857
Escherichia coli	562	PRJNA310955	310955	Proteobacteria	Gammaproteobacteria	5.08904	50.5	-	LSGI01	340	5420	4883	12/16/16	2/26/17	Contig	U.S. Food and Drug Administration	SAMN04457276	GCA_001907385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/385/GCA_001907385.1_ASM190738v1	27271741	EC10010
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.38289	65.6	-	CPAW01	73	4277	4073	3/23/15	3/12/17	Scaffold	SC	SAMEA1707544	GCA_001391035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/035/GCA_001391035.1_8898_8_18	-	2170K
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.13675	39.7	-	CLBK01	61	2360	2143	3/21/15	3/10/17	Scaffold	SC	SAMEA1025786	GCA_001153325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/325/GCA_001153325.1_6871_1_15	-	SMRU1791
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1077	39.6	-	CLCZ01	58	2311	2092	3/21/15	3/10/17	Scaffold	SC	SAMEA1025947	GCA_001153345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/345/GCA_001153345.1_6899_4_6	-	SMRU2022
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34619	65.6	-	CPHF01	89	4265	4066	3/23/15	3/12/17	Scaffold	SC	SAMEA1707545	GCA_001391055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/055/GCA_001391055.1_8987_4_57	-	0049E
Escherichia coli	562	PRJNA310955	310955	Proteobacteria	Gammaproteobacteria	5.11092	50.5	-	LSGJ01	381	5456	4902	12/16/16	2/26/17	Contig	U.S. Food and Drug Administration	SAMN04457277	GCA_001907395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/395/GCA_001907395.1_ASM190739v1	27271741	EC10032
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.5311	52.2	-	MYPT01	25	4567	4338	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358391	GCA_002055805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/805/GCA_002055805.1_ASM205580v1	-	BCW_4853
Staphylococcus aureus F92073	1417154	PRJNA226906	226906	Terrabacteria group	Firmicutes	2.89187	32.7	-	JEVD01	16	3052	2899	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398846	GCA_000597165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/165/GCA_000597165.1_Stap_aure_F92073_V1	-	F92073
Staphylococcus aureus F92105_080312	1417156	PRJNA226908	226908	Terrabacteria group	Firmicutes	2.88096	32.7	-	JEVE01	20	3045	2877	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398848	GCA_000597185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/185/GCA_000597185.1_Stap_aure_F92105_080312_V1	-	F92105_080312
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89546	52.1	-	MYPV01	91	5049	4763	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358389	GCA_002055815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/815/GCA_002055815.1_ASM205581v1	-	BCW_4851
Escherichia coli	562	PRJNA310955	310955	Proteobacteria	Gammaproteobacteria	5.07693	50.8	-	LSFZ01	426	5508	4844	12/16/16	2/26/17	Contig	U.S. Food and Drug Administration	SAMN04457259	GCA_001907435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/435/GCA_001907435.1_ASM190743v1	27271741	ATM456
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36238	65.6	-	CPBA01	72	4255	4059	3/23/15	3/12/17	Scaffold	SC	SAMEA1707547	GCA_001391075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/075/GCA_001391075.1_8898_8_17	-	1507P
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.05565	39.6	-	CKLE01	84	2248	2012	3/21/15	3/14/17	Scaffold	SC	SAMEA1023768	GCA_001153425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/425/GCA_001153425.1_6641_6_12	-	35F
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12174	39.5	-	CKUO01	79	2346	2087	3/21/15	3/10/17	Scaffold	SC	SAMEA1025694	GCA_001153445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/445/GCA_001153445.1_6823_2_4	-	SMRU1876
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35766	65.6	-	CPBI01	79	4285	4047	3/22/15	3/12/17	Scaffold	SC	SAMEA1707548	GCA_001391095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/095/GCA_001391095.1_8898_8_39	-	2310M
Escherichia coli	562	PRJNA310955	310955	Proteobacteria	Gammaproteobacteria	4.90285	50.8	-	LSGA01	233	5188	4723	12/16/16	2/26/17	Contig	U.S. Food and Drug Administration	SAMN04457260	GCA_001907455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/455/GCA_001907455.1_ASM190745v1	27271741	EC10018
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80166	52.2	-	MYQF01	75	4914	4680	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358379	GCA_002055865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/865/GCA_002055865.1_ASM205586v1	-	BCW_4840
Staphylococcus aureus F92125	1417158	PRJNA226912	226912	Terrabacteria group	Firmicutes	2.93341	32.7	-	JEVF01	21	3120	2963	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398850	GCA_000597205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/205/GCA_000597205.1_Stap_aure_F92125_V1	-	F92125
Staphylococcus aureus F92127	1417159	PRJNA226913	226913	Terrabacteria group	Firmicutes	2.9403	32.8	-	JEVG01	16	3128	2961	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398851	GCA_000597225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/225/GCA_000597225.1_Stap_aure_F92127_V1	-	F92127
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.77047	52.1	-	MYQG01	85	4868	4637	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358378	GCA_002055885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/885/GCA_002055885.1_ASM205588v1	-	BCW_4839
Escherichia coli	562	PRJNA310955	310955	Proteobacteria	Gammaproteobacteria	4.91698	50.8	-	LSGD01	506	5392	4708	12/16/16	2/26/17	Contig	U.S. Food and Drug Administration	SAMN04457270	GCA_001907465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/465/GCA_001907465.1_ASM190746v1	27271741	ATM462
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35524	65.6	-	CPGS01	91	4291	4060	3/23/15	3/12/17	Scaffold	SC	SAMEA1707551	GCA_001391115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/115/GCA_001391115.1_8987_4_35	-	type strain: 0292
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.05332	39.6	-	CKCN01	34	2229	1979	3/21/15	3/10/17	Scaffold	SC	SAMEA1024017	GCA_001153625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/625/GCA_001153625.1_6593_5_1	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.0668	39.6	-	CKGF01	90	2268	1992	3/21/15	3/10/17	Scaffold	SC	SAMEA1023715	GCA_001153645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/645/GCA_001153645.1_6630_4_5	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.37255	65.6	-	CPDS01	73	4289	4065	3/23/15	3/12/17	Scaffold	SC	SAMEA1707552	GCA_001391135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/135/GCA_001391135.1_8939_3_18	-	2353J
Escherichia coli	562	PRJNA310955	310955	Proteobacteria	Gammaproteobacteria	5.12707	50.6	-	LSGE01	562	5661	4904	12/16/16	2/26/17	Contig	U.S. Food and Drug Administration	SAMN04457272	GCA_001907495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/495/GCA_001907495.1_ASM190749v1	27271741	ATM463
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.62296	52.2	-	MYQH01	83	4690	4454	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358377	GCA_002055905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/905/GCA_002055905.1_ASM205590v1	-	BCW_4838
Staphylococcus aureus F92128	1417160	PRJNA226914	226914	Terrabacteria group	Firmicutes	2.93868	32.7	-	JEVH01	16	3120	2955	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398852	GCA_000597245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/245/GCA_000597245.1_Stap_aure_F92128_V1	-	F92128
Staphylococcus aureus H65830	1417171	PRJNA226925	226925	Terrabacteria group	Firmicutes	2.8953	32.7	-	JEVI01	12	3055	2889	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398863	GCA_000597265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/265/GCA_000597265.1_Stap_aure_H65830_V1	-	H65830
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.44636	52.3	-	MYQI01	61	4485	4245	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358376	GCA_002055935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/935/GCA_002055935.1_ASM205593v1	-	BCW_4837
Escherichia coli	562	PRJNA310955	310955	Proteobacteria	Gammaproteobacteria	5.01957	50.7	-	LSGG01	502	5520	4751	12/16/16	2/26/17	Contig	U.S. Food and Drug Administration	SAMN04457274	GCA_001907505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/505/GCA_001907505.1_ASM190750v1	27271741	ATM266
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34305	65.6	-	CPHE01	89	4274	4061	3/22/15	3/12/17	Scaffold	SC	SAMEA1707558	GCA_001391175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/175/GCA_001391175.1_8987_4_55	-	0665Z
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.09018	39.7	-	CRQR01	47	2305	2090	3/23/15	3/10/17	Scaffold	SC	SAMEA1025000	GCA_001153685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/685/GCA_001153685.1_6791_6_13	-	SMRU637
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.03274	39.3	-	CKZG01	274	2367	2007	3/21/15	3/11/17	Scaffold	SC	SAMEA1026174	GCA_001153705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/705/GCA_001153705.1_6840_1_6	-	SMRU1758
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35625	65.6	-	CHYD01	81	4272	4060	4/21/15	3/12/17	Scaffold	SC	SAMEA1707560	GCA_001391195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/195/GCA_001391195.1_8939_3_19	-	2369B
Escherichia coli	562	PRJNA310955	310955	Proteobacteria	Gammaproteobacteria	5.1935	50.4	-	LSGL01	351	5527	4956	12/16/16	2/26/17	Contig	U.S. Food and Drug Administration	SAMN04457279	GCA_001907535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/535/GCA_001907535.1_ASM190753v1	27271741	ATM460
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.76947	52.2	-	MYQJ01	76	4876	4637	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358375	GCA_002055955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/955/GCA_002055955.1_ASM205595v1	-	BCW_4836
Staphylococcus aureus H72115	1417172	PRJNA226926	226926	Terrabacteria group	Firmicutes	2.90078	32.7	-	JEVJ01	14	3061	2896	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398864	GCA_000597285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/285/GCA_000597285.1_Stap_aure_H72115_V1	-	H72115
Staphylococcus aureus H72129_090612	1417174	PRJNA226928	226928	Terrabacteria group	Firmicutes	2.83489	32.8	-	JEVK01	40	2973	2842	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398866	GCA_000597305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/305/GCA_000597305.1_Stap_aure_H72129_090612_V1	-	H72129_090612
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.16396	51.3	-	MYQL01	98	5214	4802	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358373	GCA_002055995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/995/GCA_002055995.1_ASM205599v1	-	BCW_4834
Escherichia coli	562	PRJNA310955	310955	Proteobacteria	Gammaproteobacteria	5.10983	50.5	-	LSGK01	357	5457	4904	12/16/16	2/26/17	Contig	U.S. Food and Drug Administration	SAMN04457278	GCA_001907545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/545/GCA_001907545.1_ASM190754v1	27271741	EC10033
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35079	65.6	-	CPHB01	91	4272	4063	3/23/15	3/12/17	Scaffold	SC	SAMEA1707562	GCA_001391215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/215/GCA_001391215.1_8987_4_53	-	0541P
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.99604	39.8	-	CKFO01	62	2189	1943	3/21/15	3/10/17	Scaffold	SC	SAMEA1024053	GCA_001153745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/745/GCA_001153745.1_6630_3_4	-	3
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.06116	39.7	-	CKON01	59	2242	2032	3/21/15	3/10/17	Scaffold	SC	SAMEA1024052	GCA_001153785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/785/GCA_001153785.1_6673_8_5	-	SMRU245
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3537	65.6	-	CHCI01	86	4284	4060	4/21/15	3/12/17	Scaffold	SC	SAMEA1707564	GCA_001391235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/235/GCA_001391235.1_8898_8_14	-	2280E
Escherichia coli	562	PRJNA310955	310955	Proteobacteria	Gammaproteobacteria	5.39553	50.5	-	LSGM01	416	5812	5208	12/16/16	2/26/17	Contig	U.S. Food and Drug Administration	SAMN04457280	GCA_001907565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/907/565/GCA_001907565.1_ASM190756v1	27271741	ATM461
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.52985	52.1	-	MYQM01	47	4667	4399	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358282	GCA_002056005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/005/GCA_002056005.1_ASM205600v1	-	BCW_4684
Staphylococcus aureus M52622	1417178	PRJNA226932	226932	Terrabacteria group	Firmicutes	2.89467	32.7	-	JEVL01	17	3056	2887	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398870	GCA_000597325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/325/GCA_000597325.1_Stap_aure_M52622_V1	-	M52622
Staphylococcus aureus T18851	1417192	PRJNA226946	226946	Terrabacteria group	Firmicutes	2.91167	32.7	-	JEVM01	20	3077	2911	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398884	GCA_000597345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/345/GCA_000597345.1_Stap_aure_T18851_V1	-	T18851
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70481	52.1	-	MYQO01	35	4833	4557	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358280	GCA_002056015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/015/GCA_002056015.1_ASM205601v1	-	BCW_4682
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.27638	50.7	-	LRLK01	119	5549	5097	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420759	GCA_001910825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/825/GCA_001910825.1_ASM191082v1	-	302042
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.34883	65.6	-	CPHA01	84	4275	4061	3/23/15	3/12/17	Scaffold	SC	SAMEA1707565	GCA_001391255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/255/GCA_001391255.1_8987_4_54	-	0638V
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.03061	39.6	-	CLEV01	65	2236	1992	3/21/15	3/11/17	Scaffold	SC	SAMEA1025756	GCA_001153805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/805/GCA_001153805.1_6899_6_8	-	SMRU2072
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.2053	39.6	-	CMEI01	69	2420	2142	3/21/15	3/10/17	Scaffold	SC	SAMEA1028671	GCA_001153845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/845/GCA_001153845.1_7011_5_1	-	SMRU2785
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35352	65.6	-	CPGY01	87	4272	4050	3/23/15	3/12/17	Scaffold	SC	SAMEA1707573	GCA_001391275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/275/GCA_001391275.1_8987_4_52	-	0441F
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.23154	50.6	-	LRLQ01	138	5566	5088	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420897	GCA_001910835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/835/GCA_001910835.1_ASM191083v1	-	203739
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69829	52.1	-	MYQP01	41	4826	4549	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358279	GCA_002056055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/055/GCA_002056055.1_ASM205605v1	-	BCW_4681
Staphylococcus aureus T18865	1417193	PRJNA226947	226947	Terrabacteria group	Firmicutes	2.93819	32.7	-	JEVN01	21	3135	2968	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398885	GCA_000597365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/365/GCA_000597365.1_Stap_aure_T18865_V1	-	T18865
Staphylococcus aureus T28649	1417198	PRJNA226952	226952	Terrabacteria group	Firmicutes	2.86456	32.8	-	JEVO01	48	2992	2848	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398890	GCA_000597385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/385/GCA_000597385.1_Stap_aure_T28649_V1	-	T28649
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69855	52.1	-	MYQQ01	40	4806	4555	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358278	GCA_002056095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/095/GCA_002056095.1_ASM205609v1	-	BCW_4680
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.19319	50.8	-	LRLP01	279	5736	5009	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420783	GCA_001910845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/845/GCA_001910845.1_ASM191084v1	-	203272
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.35521	65.6	-	CPGR01	88	4287	4069	3/22/15	3/12/17	Scaffold	SC	SAMEA1707574	GCA_001391295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/295/GCA_001391295.1_8987_4_34	-	type strain: 0085
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.0621	39.6	-	CKMX01	44	2250	1998	3/21/15	3/10/17	Scaffold	SC	SAMEA1023729	GCA_001153865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/865/GCA_001153865.1_6649_8_16	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.02253	39.7	-	CKFP01	88	2219	2002	3/21/15	3/10/17	Scaffold	SC	SAMEA1024059	GCA_001153885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/885/GCA_001153885.1_6630_3_6	-	19F
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.3547	65.6	-	CPDR01	96	4274	4046	3/23/15	3/12/17	Scaffold	SC	SAMEA1707575	GCA_001391315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/315/GCA_001391315.1_8939_3_17	-	type strain: 2339
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.10942	50.6	-	LRLM01	172	5436	4931	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420771	GCA_001910855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/855/GCA_001910855.1_ASM191085v1	-	201530
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69637	52.1	-	MYQS01	41	4801	4553	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358276	GCA_002056105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/105/GCA_002056105.1_ASM205610v1	-	BCW_4678
Staphylococcus aureus T36127	1417206	PRJNA226960	226960	Terrabacteria group	Firmicutes	2.84205	32.7	-	JEVP01	19	2989	2836	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398898	GCA_000597405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/405/GCA_000597405.1_Stap_aure_T36127_V1	-	T36127
Staphylococcus aureus T39082	1417207	PRJNA226961	226961	Terrabacteria group	Firmicutes	2.89122	32.7	-	JEVQ01	11	3045	2886	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398899	GCA_000597425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/425/GCA_000597425.1_Stap_aure_T39082_V1	-	T39082
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.6952	52.1	-	MYQU01	28	4817	4547	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358274	GCA_002056135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/135/GCA_002056135.1_ASM205613v1	-	BCW_4676
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.11903	50.5	-	LRLR01	194	5539	4967	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04421016	GCA_001910905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/905/GCA_001910905.1_ASM191090v1	-	204021
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	4.36033	65.6	-	CPFX01	88	4278	4064	3/22/15	3/12/17	Scaffold	SC	SAMEA1707577	GCA_001391335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/335/GCA_001391335.1_8939_3_96	-	2518N
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.15319	39.6	-	CLCY01	56	2387	2133	3/21/15	3/10/17	Scaffold	SC	SAMEA1025806	GCA_001154145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/145/GCA_001154145.1_6899_4_17	-	SMRU2033
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.18635	39.8	-	CPMY01	150	2397	2135	3/23/15	3/10/17	Scaffold	SC	SAMEA1020659	GCA_001154165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/165/GCA_001154165.1_6569_4_12	-	DCC2623
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.26175	65.4	-	CNGM01	161	4280	4013	3/23/15	3/12/17	Scaffold	SC	SAMEA1018838	GCA_001391355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/355/GCA_001391355.1_6540_5_10	-	Bir 220
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.11115	50.7	-	LRKF01	129	5398	4988	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420238	GCA_001910915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/915/GCA_001910915.1_ASM191091v1	-	300237
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69229	52.1	-	MYQV01	34	4805	4536	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358273	GCA_002056155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/155/GCA_002056155.1_ASM205615v1	-	BCW_4675
Staphylococcus aureus W73649	1417212	PRJNA226966	226966	Terrabacteria group	Firmicutes	2.88895	32.7	-	JEVR01	25	3033	2894	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398904	GCA_000597445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/445/GCA_000597445.1_Stap_aure_W73649_V1	-	W73649
Staphylococcus aureus W79990_080112	1417217	PRJNA226971	226971	Terrabacteria group	Firmicutes	2.88842	32.8	-	JEVS01	46	3051	2878	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398909	GCA_000597465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/465/GCA_000597465.1_Stap_aure_W79990_080112_V1	-	W79990_080112
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69602	52.1	-	MYQX01	40	4795	4552	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358271	GCA_002056195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/195/GCA_002056195.1_ASM205619v1	-	BCW_4673
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.24274	50.7	-	LRLY01	234	5705	5105	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04421281	GCA_001910925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/925/GCA_001910925.1_ASM191092v1	-	703348
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28609	65.4	-	CNIJ01	157	4294	4003	3/23/15	3/12/17	Scaffold	SC	SAMEA1018839	GCA_001391375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/375/GCA_001391375.1_6540_7_3	-	Bir 264
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15217	39.4	-	CKNH01	50	2388	2156	3/21/15	3/10/17	Scaffold	SC	SAMEA1023911	GCA_001154245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/245/GCA_001154245.1_6664_1_1	-	20
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08986	39.8	-	CKPL01	65	2243	1996	3/21/15	3/4/17	Scaffold	SC	SAMEA1024892	GCA_001154325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/325/GCA_001154325.1_6680_4_7	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32888	65.5	-	CNMQ01	158	4310	4071	3/23/15	3/12/17	Scaffold	SC	SAMEA1018840	GCA_001391395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/395/GCA_001391395.1_7054_1_30	-	Bir 429
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.18204	50.7	-	LRLX01	228	5622	4992	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04421280	GCA_001910935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/935/GCA_001910935.1_ASM191093v1	-	703491
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69528	52.1	-	MYQW01	40	4801	4553	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358272	GCA_002056205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/205/GCA_002056205.1_ASM205620v1	-	BCW_4674
Staphylococcus aureus W83133	1417218	PRJNA226972	226972	Terrabacteria group	Firmicutes	2.8924	32.7	-	JEVT01	23	3053	2892	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398910	GCA_000597485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/485/GCA_000597485.1_Stap_aure_W83133_V1	-	W83133
Staphylococcus aureus W89268	1417223	PRJNA226977	226977	Terrabacteria group	Firmicutes	2.94906	32.7	-	JEVU01	24	3125	2963	2/24/14	3/3/17	Contig	Broad Institute	SAMN02398915	GCA_000597505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/505/GCA_000597505.1_Stap_aure_W89268_V1	-	W89268
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72992	52	-	MYQY01	46	4860	4584	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358270	GCA_002056235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/235/GCA_002056235.1_ASM205623v1	-	BCW_4672
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	4.69395	50.8	-	LRKH01	267	5169	4434	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420240	GCA_001910985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/985/GCA_001910985.1_ASM191098v1	-	300769
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28367	65.4	-	CNEY01	206	4314	4035	3/23/15	3/12/17	Scaffold	SC	SAMEA1018843	GCA_001391415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/415/GCA_001391415.1_6540_2_15	-	Bir 157
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99662	39.7	-	CQQT01	43	2215	2000	3/23/15	3/4/17	Scaffold	SC	SAMEA970293	GCA_001154345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/345/GCA_001154345.1_5159_6_3	-	BHN167
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.10573	39.5	-	CMLU01	49	2350	2112	3/23/15	3/4/17	Scaffold	SC	SAMEA1029264	GCA_001154365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/365/GCA_001154365.1_7054_6_24	-	SMRU3096
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28624	65.4	-	CNIQ01	174	4280	4024	3/23/15	3/12/17	Scaffold	SC	SAMEA1018844	GCA_001391435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/435/GCA_001391435.1_6540_8_16	-	Bir 301
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.38695	50.3	-	LRKJ01	167	5644	5097	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420250	GCA_001910995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/910/995/GCA_001910995.1_ASM191099v1	-	600035
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69441	52.1	-	MYQZ01	27	4807	4558	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358269	GCA_002056245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/245/GCA_002056245.1_ASM205624v1	-	BCW_4671
Staphylococcus aureus AMMC6114	1409628	PRJNA223950	223950	Terrabacteria group	Firmicutes	2.89735	32.7	-	JDXI01	5	3058	2899	2/14/14	3/3/17	Contig	Broad Institute	SAMN02381689	GCA_000597525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/525/GCA_000597525.1_Stap_aure_AMMC6114_V1	-	AMMC6114
Staphylococcus aureus UCIM6049	1409520	PRJNA223840	223840	Terrabacteria group	Firmicutes	2.89549	32.7	-	JDXY01	5	3052	2887	2/14/14	3/3/17	Contig	Broad Institute	SAMN02381581	GCA_000597545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/597/545/GCA_000597545.1_Stap_aure_UCIM6049_V1	-	UCIM6049
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.63944	52.1	-	MYRA01	42	4738	4469	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358268	GCA_002056265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/265/GCA_002056265.1_ASM205626v1	-	BCW_4670
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	4.88984	50.7	-	LRKP01	135	5244	4717	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420266	GCA_001911005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/005/GCA_001911005.1_ASM191100v1	-	100714
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32909	65.4	-	CNHB01	192	4338	4030	3/23/15	3/12/17	Scaffold	SC	SAMEA1018845	GCA_001391455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/455/GCA_001391455.1_6540_6_10	-	Bir 244
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.16515	39.5	-	CLTP01	66	2402	2172	3/21/15	3/4/17	Scaffold	SC	SAMEA1028631	GCA_001154385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/385/GCA_001154385.1_6972_5_11	-	SMRU2627
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.18989	39.5	-	CJZT01	66	2389	2170	3/21/15	3/4/17	Scaffold	SC	SAMEA974648	GCA_001154405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/405/GCA_001154405.1_6259_5_23	-	35F
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31757	65.4	-	CNKQ01	156	4313	4049	3/23/15	3/12/17	Scaffold	SC	SAMEA1018846	GCA_001391475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/475/GCA_001391475.1_6570_6_9	-	Bir 341
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.00197	50.8	-	LRKK01	152	5336	4873	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420252	GCA_001911015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/015/GCA_001911015.1_ASM191101v1	-	200244
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7949	52.1	-	MYRC01	29	4918	4647	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358266	GCA_002056285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/285/GCA_002056285.1_ASM205628v1	-	BCW_4668
Staphylococcus aureus F12926_081012	1417130	PRJNA226881	226881	Terrabacteria group	Firmicutes	2.76322	32.7	-	JGEX01	80	2843	2681	3/27/14	3/3/17	Contig	Broad Institute	SAMN02398822	GCA_000601505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/505/GCA_000601505.1_Stap_aure_F12926_081012_V1	-	F12926_081012
Staphylococcus aureus F16104	1417131	PRJNA226882	226882	Terrabacteria group	Firmicutes	2.81034	32.8	-	JGEY01	73	2910	2755	3/27/14	3/3/17	Contig	Broad Institute	SAMN02398823	GCA_000601525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/525/GCA_000601525.1_Stap_aure_F16104_V1	-	F16104
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.63771	52.1	-	MYRD01	32	4717	4477	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358265	GCA_002056335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/335/GCA_002056335.1_ASM205633v1	-	BCW_4667
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.37253	50.4	-	LRKR01	152	5618	5118	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420272	GCA_001911065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/065/GCA_001911065.1_ASM191106v1	-	100885
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30887	65.4	-	CNGU01	159	4322	4017	3/22/15	3/12/17	Scaffold	SC	SAMEA1018849	GCA_001391495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/495/GCA_001391495.1_6540_5_23	-	Bir 233
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.07116	39.5	-	CLEZ01	54	2257	2031	3/21/15	3/4/17	Scaffold	SC	SAMEA1026132	GCA_001154445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/445/GCA_001154445.1_6899_7_12	-	SMRU2100
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.05464	39.5	-	CRAK01	69	2218	2002	3/23/15	3/4/17	Scaffold	SC	SAMEA1024654	GCA_001154465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/465/GCA_001154465.1_6730_6_4	-	SMRU676
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32117	65.5	-	CNMG01	159	4286	4055	3/23/15	3/12/17	Scaffold	SC	SAMEA1018850	GCA_001391515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/515/GCA_001391515.1_7054_1_22	-	Bir 421
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.05788	50.7	-	LRKV01	149	5382	4833	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420280	GCA_001911075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/075/GCA_001911075.1_ASM191107v1	-	302057
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69776	52.1	-	MYRF01	44	4809	4555	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358263	GCA_002056345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/345/GCA_002056345.1_ASM205634v1	-	BCW_4665
Staphylococcus aureus F16108	1417134	PRJNA226885	226885	Terrabacteria group	Firmicutes	2.92599	32.8	-	JGEZ01	31	3112	2947	3/27/14	3/3/17	Contig	Broad Institute	SAMN02398826	GCA_000601545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/545/GCA_000601545.1_Stap_aure_F16108_V1	-	F16108
Staphylococcus aureus F19470	1417136	PRJNA226888	226888	Terrabacteria group	Firmicutes	2.88221	32.8	-	JGFA01	77	3025	2871	3/27/14	3/3/17	Contig	Broad Institute	SAMN02398828	GCA_000601565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/565/GCA_000601565.1_Stap_aure_F19470_V1	-	F19470
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69685	52.1	-	MYRH01	37	4803	4554	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358261	GCA_002056375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/375/GCA_002056375.1_ASM205637v1	-	BCW_4663
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	4.89295	50.8	-	LRKU01	266	5395	4619	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420279	GCA_001911085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/085/GCA_001911085.1_ASM191108v1	-	300783
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28788	65.4	-	CNHA01	145	4302	4032	3/22/15	3/12/17	Scaffold	SC	SAMEA1018853	GCA_001391535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/535/GCA_001391535.1_6540_5_9	-	Bir 219
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.0561	39.7	-	CKYE01	73	2269	2028	3/21/15	3/4/17	Scaffold	SC	SAMEA1025832	GCA_001154505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/505/GCA_001154505.1_6823_7_4	-	SMRU1996
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.05583	39.6	-	CQXS01	53	2258	2012	3/22/15	3/15/17	Scaffold	SC	SAMEA1024728	GCA_001154525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/525/GCA_001154525.1_6730_1_5	-	SMRU581
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33208	65.4	-	CNII01	148	4333	4061	3/23/15	3/12/17	Scaffold	SC	SAMEA1018855	GCA_001391555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/555/GCA_001391555.1_6540_7_4	-	Bir 265
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.19447	50.6	-	LRKW01	168	5563	5037	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420281	GCA_001911095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/095/GCA_001911095.1_ASM191109v1	-	302555
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69519	52.1	-	MYRG01	28	4802	4547	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358262	GCA_002056395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/395/GCA_002056395.1_ASM205639v1	-	BCW_4664
Staphylococcus aureus F19490	1417137	PRJNA226889	226889	Terrabacteria group	Firmicutes	2.74115	32.8	-	JGFB01	71	2845	2648	3/27/14	3/3/17	Contig	Broad Institute	SAMN02398829	GCA_000601585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/585/GCA_000601585.1_Stap_aure_F19490_V1	-	F19490
Staphylococcus aureus F29447	1417139	PRJNA226891	226891	Terrabacteria group	Firmicutes	2.85058	32.8	-	JGFC01	90	2997	2830	3/27/14	3/3/17	Contig	Broad Institute	SAMN02398831	GCA_000601605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/605/GCA_000601605.1_Stap_aure_F29447_V1	-	F29447
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72977	52.1	-	MYRI01	34	4842	4591	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358260	GCA_002056435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/435/GCA_002056435.1_ASM205643v1	-	BCW_4662
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.24514	50.4	-	LRKY01	107	5442	4990	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420289	GCA_001911145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/145/GCA_001911145.1_ASM191114v1	-	602720
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31074	65.4	-	CNGZ01	192	4308	4003	3/22/15	3/12/17	Scaffold	SC	SAMEA1018858	GCA_001391575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/575/GCA_001391575.1_6540_5_24	-	Bir 234
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.05584	39.7	-	CPUO01	99	2210	2008	3/23/15	3/4/17	Scaffold	SC	SAMEA770022	GCA_001154545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/545/GCA_001154545.1_5242_2_11	-	19F/10
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09381	39.6	-	CMKT01	49	2303	2026	3/22/15	3/6/17	Scaffold	SC	SAMEA1029375	GCA_001154685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/685/GCA_001154685.1_7054_5_16	-	SMRU3064
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30563	65.4	-	CNIT01	185	4311	4045	3/23/15	3/12/17	Scaffold	SC	SAMEA1018859	GCA_001391595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/595/GCA_001391595.1_6540_8_17	-	Bir 302
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.00375	50.8	-	LRLD01	144	5404	4910	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420294	GCA_001911155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/155/GCA_001911155.1_ASM191115v1	-	102878
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69499	52.1	-	MYRJ01	43	4804	4555	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358259	GCA_002056445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/445/GCA_002056445.1_ASM205644v1	-	BCW_4661
Staphylococcus aureus H59303_080912	1417167	PRJNA226921	226921	Terrabacteria group	Firmicutes	2.83834	32.8	-	JGFD01	67	2954	2804	3/27/14	3/3/17	Contig	Broad Institute	SAMN02398859	GCA_000601625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/625/GCA_000601625.1_Stap_aure_H59303_080912_V1	-	H59303_080912
Staphylococcus aureus H59312_080912	1417168	PRJNA226922	226922	Terrabacteria group	Firmicutes	2.82247	32.8	-	JGFE01	62	2967	2805	3/27/14	3/3/17	Contig	Broad Institute	SAMN02398860	GCA_000601645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/645/GCA_000601645.1_Stap_aure_H59312_080912_V1	-	H59312_080912
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.81937	51.6	-	MYRL01	90	4871	4505	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358257	GCA_002056485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/485/GCA_002056485.1_ASM205648v1	-	BCW_4659
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.11585	50.8	-	LRLG01	225	5495	4915	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420710	GCA_001911165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/165/GCA_001911165.1_ASM191116v1	-	402577
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.25251	65.4	-	CNJX01	155	4243	3932	3/23/15	3/12/17	Scaffold	SC	SAMEA1018862	GCA_001391615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/615/GCA_001391615.1_6570_6_10	-	Bir 342
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05709	39.8	-	CMEP01	141	2224	1969	3/21/15	3/4/17	Scaffold	SC	SAMEA1028777	GCA_001154725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/725/GCA_001154725.1_7011_5_18	-	SMRU2802
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.0918	39.6	-	CPTF01	39	2298	2057	3/23/15	3/4/17	Scaffold	SC	SAMEA1020842	GCA_001154785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/785/GCA_001154785.1_6570_3_14	-	SPN4901
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30327	65.4	-	CNGX01	174	4330	4031	3/23/15	3/12/17	Scaffold	SC	SAMEA1018863	GCA_001391635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/635/GCA_001391635.1_6540_5_21	-	Bir 231
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	4.96875	50.5	-	LRLH01	178	5337	4750	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420751	GCA_001911175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/175/GCA_001911175.1_ASM191117v1	-	402878
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7313	52.1	-	MYRK01	37	4850	4596	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358258	GCA_002056505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/505/GCA_002056505.1_ASM205650v1	-	BCW_4660
Staphylococcus aureus H59329	1417169	PRJNA226923	226923	Terrabacteria group	Firmicutes	2.87927	32.8	-	JGFF01	11	3030	2866	3/27/14	3/3/17	Contig	Broad Institute	SAMN02398861	GCA_000601665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/665/GCA_000601665.1_Stap_aure_H59329_V1	-	H59329
Staphylococcus aureus M62794	1417185	PRJNA226939	226939	Terrabacteria group	Firmicutes	2.87053	32.8	-	JGFG01	23	3028	2858	3/27/14	3/3/17	Contig	Broad Institute	SAMN02398877	GCA_000601685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/685/GCA_000601685.1_Stap_aure_M62794_V1	-	M62794
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69603	52.1	-	MYRN01	27	4806	4557	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358255	GCA_002056535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/535/GCA_002056535.1_ASM205653v1	-	BCW_4657
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	4.92246	50.7	-	LRLL01	192	5188	4675	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420770	GCA_001911225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/225/GCA_001911225.1_ASM191122v1	-	504662
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33807	65.4	-	CNHP01	162	4311	4029	3/22/15	3/12/17	Scaffold	SC	SAMEA1018864	GCA_001391655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/655/GCA_001391655.1_6540_6_7	-	Bir 241
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07772	39.7	-	CKCJ01	53	2295	2070	3/21/15	3/4/17	Scaffold	SC	SAMEA1024041	GCA_001154825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/825/GCA_001154825.1_6593_4_7	-	19F
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10054	39.7	-	CLKA01	56	2311	2065	3/21/15	3/10/17	Scaffold	SC	SAMEA1028709	GCA_001154885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/885/GCA_001154885.1_6925_8_24	-	SMRU2544
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32314	65.4	-	CNKO01	164	4323	4047	3/22/15	3/12/17	Scaffold	SC	SAMEA1018866	GCA_001391675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/675/GCA_001391675.1_6570_6_7	-	Bir 339
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.33232	50.8	-	LRLN01	209	5777	5226	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420780	GCA_001911235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/235/GCA_001911235.1_ASM191123v1	-	203145
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.86456	52.1	-	MYRP01	50	5012	4753	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358252	GCA_002056555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/555/GCA_002056555.1_ASM205655v1	-	BCW_4653
Staphylococcus aureus M66468	1417186	PRJNA226940	226940	Terrabacteria group	Firmicutes	2.92338	32.8	-	JGFH01	39	3121	2945	3/27/14	3/3/17	Contig	Broad Institute	SAMN02398878	GCA_000601705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/705/GCA_000601705.1_Stap_aure_M66468_V1	-	M66468
Staphylococcus aureus T25283	1417196	PRJNA226950	226950	Terrabacteria group	Firmicutes	2.8867	32.7	-	JGFI01	24	3052	2881	3/27/14	3/3/17	Contig	Broad Institute	SAMN02398888	GCA_000601725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/725/GCA_000601725.1_Stap_aure_T25283_V1	-	T25283
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.00986	52	-	MYRV01	688	5442	4770	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358072	GCA_002056575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/575/GCA_002056575.1_ASM205657v1	-	BCW_4389
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.30046	50.8	-	LRLO01	156	5590	5141	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420781	GCA_001911245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/245/GCA_001911245.1_ASM191124v1	-	203153
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.25908	65.4	-	CNKY01	152	4241	3946	3/23/15	3/12/17	Scaffold	SC	SAMEA1018867	GCA_001391695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/695/GCA_001391695.1_6570_7_21	-	Bir 378
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.07961	39.7	-	CLUJ01	54	2281	2066	3/21/15	3/11/17	Scaffold	SC	SAMEA1025729	GCA_001154925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/925/GCA_001154925.1_6983_2_21	-	SMRU2229
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.04453	39.5	-	CQXU01	63	2211	1992	3/22/15	3/10/17	Scaffold	SC	SAMEA1024806	GCA_001154945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/945/GCA_001154945.1_6730_1_8	-	SMRU584
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.3175	65.4	-	CNIK01	150	4308	4056	3/23/15	3/12/17	Scaffold	SC	SAMEA1018869	GCA_001391715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/715/GCA_001391715.1_6540_7_5	-	Bir 266
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.12794	50.3	-	LRLS01	375	5540	4934	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04421074	GCA_001911255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/255/GCA_001911255.1_ASM191125v1	-	403398
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.82825	52.2	-	MYRW01	375	5122	4660	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358071	GCA_002056585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/585/GCA_002056585.1_ASM205658v1	-	BCW_4388
Staphylococcus aureus T35594	1417201	PRJNA226955	226955	Terrabacteria group	Firmicutes	2.86871	32.8	-	JGFJ01	86	3000	2837	3/27/14	3/3/17	Contig	Broad Institute	SAMN02398893	GCA_000601745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/745/GCA_000601745.1_Stap_aure_T35594_V1	-	T35594
Staphylococcus aureus T35596	1417202	PRJNA226956	226956	Terrabacteria group	Firmicutes	2.92364	32.8	-	JGFK01	30	3115	2944	3/27/14	3/3/17	Contig	Broad Institute	SAMN02398894	GCA_000601765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/765/GCA_000601765.1_Stap_aure_T35596_V1	-	T35596
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.79882	52.1	-	MYRR01	44	4957	4684	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358250	GCA_002056615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/615/GCA_002056615.1_ASM205661v1	-	BCW_4651
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	4.99851	50.6	-	LRLT01	151	5352	4819	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04421178	GCA_001911305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/305/GCA_001911305.1_ASM191130v1	-	403314
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29889	65.4	-	CNFE01	237	4327	3979	3/23/15	3/12/17	Scaffold	SC	SAMEA1018871	GCA_001391735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/735/GCA_001391735.1_6540_2_17	-	Bir 159
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14602	39.6	-	CKBF01	71	2375	2151	3/21/15	3/10/17	Scaffold	SC	SAMEA974626	GCA_001154965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/965/GCA_001154965.1_6259_7_22	-	6C
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.16755	39.4	-	CRVO01	69	2446	2187	3/23/15	3/10/17	Scaffold	SC	SAMEA1025804	GCA_001155145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/145/GCA_001155145.1_6805_7_17	-	SMRU1746
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.34458	65.5	-	CNMN01	156	4320	4091	3/22/15	3/12/17	Scaffold	SC	SAMEA1018872	GCA_001391755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/755/GCA_001391755.1_7054_1_33	-	Bir 432
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.20677	50.6	-	LRLU01	259	5758	5022	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04421180	GCA_001911315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/315/GCA_001911315.1_ASM191131v1	-	403456
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.12669	52.2	-	MYRS01	142	5340	5073	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358075	GCA_002056625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/625/GCA_002056625.1_ASM205662v1	-	BCW_4392
Staphylococcus aureus T35604	1417203	PRJNA226957	226957	Terrabacteria group	Firmicutes	2.91072	32.7	-	JGFL01	72	3056	2899	3/27/14	3/3/17	Contig	Broad Institute	SAMN02398895	GCA_000601785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/785/GCA_000601785.1_Stap_aure_T35604_V1	-	T35604
Staphylococcus aureus W12538	1417209	PRJNA226963	226963	Terrabacteria group	Firmicutes	2.93131	32.8	-	JGFM01	18	3113	2946	3/27/14	3/3/17	Contig	Broad Institute	SAMN02398901	GCA_000601805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/805/GCA_000601805.1_Stap_aure_W12538_V1	-	W12538
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.1062	51.8	-	MYSA01	89	5250	4985	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358067	GCA_002056695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/695/GCA_002056695.1_ASM205669v1	-	BCW_4384
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.2949	50.8	-	LRLW01	248	5784	5097	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04421278	GCA_001911325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/325/GCA_001911325.1_ASM191132v1	-	703427
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33188	65.4	-	CNHT01	145	4310	4000	3/22/15	3/12/17	Scaffold	SC	SAMEA1018873	GCA_001391775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/775/GCA_001391775.1_6540_6_8	-	Bir 242
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.04893	39.9	-	CRKN01	80	2246	1972	3/22/15	3/10/17	Scaffold	SC	SAMEA1025602	GCA_001155165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/165/GCA_001155165.1_6753_4_1	-	SMRU1537
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.98094	39.8	-	CQRF01	42	2195	1988	3/23/15	3/10/17	Scaffold	SC	SAMEA970275	GCA_001155185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/185/GCA_001155185.1_5159_7_6	-	BHN632
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.23916	65.4	-	CNGL01	171	4262	4009	3/23/15	3/12/17	Scaffold	SC	SAMEA1018876	GCA_001391795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/795/GCA_001391795.1_6540_5_12	-	Bir 222
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.11968	50.7	-	LRLV01	176	5577	5047	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04421185	GCA_001911335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/335/GCA_001911335.1_ASM191133v1	-	703420
Salmonella enterica subsp. enterica serovar Agona	58095	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.94653	51.9	-	MYSB01	512	5367	4827	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368979	GCA_002056705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/705/GCA_002056705.1_ASM205670v1	-	BCW_4383
Staphylococcus aureus F45749	1418261	PRJNA227507	227507	Terrabacteria group	Firmicutes	2.8048	32.9	-	JGFN01	148	2944	2768	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402384	GCA_000601825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/825/GCA_000601825.1_Stap_aure_F45749_V1	-	F45749
Staphylococcus aureus W31983	1418262	PRJNA227508	227508	Terrabacteria group	Firmicutes	2.72149	32.8	-	JGFO01	109	2845	2655	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402385	GCA_000601845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/845/GCA_000601845.1_Stap_aure_W31983_V1	-	W31983
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.8383	52.2	-	MYSE01	73	5006	4751	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368977	GCA_002056745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/745/GCA_002056745.1_ASM205674v1	-	BCW_4380
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	4.84161	50.7	-	LRLZ01	136	5145	4706	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04421282	GCA_001911385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/385/GCA_001911385.1_ASM191138v1	-	100082
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31922	65.4	-	CNKW01	165	4301	4020	3/23/15	3/12/17	Scaffold	SC	SAMEA1018878	GCA_001391815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/815/GCA_001391815.1_6570_7_20	-	Bir 377
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99287	39.8	-	CQQZ01	44	2211	1990	3/23/15	3/10/17	Scaffold	SC	SAMEA970265	GCA_001155205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/205/GCA_001155205.1_5159_7_1	-	BHN626
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.25908	39.5	-	CLEI01	94	2477	2238	3/21/15	3/11/17	Scaffold	SC	SAMEA1025855	GCA_001155225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/225/GCA_001155225.1_6899_5_9	-	SMRU2049
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33924	65.5	-	CNMV01	228	4303	3949	3/23/15	3/12/17	Scaffold	SC	SAMEA1018881	GCA_001391835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/835/GCA_001391835.1_7054_1_8	-	Bir 407
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.50532	50.5	-	LRMC01	179	5817	5283	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04421285	GCA_001911405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/405/GCA_001911405.1_ASM191140v1	-	103199
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.95861	52.1	-	MYSG01	88	5158	4896	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368975	GCA_002056755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/755/GCA_002056755.1_ASM205675v1	-	BCW_4378
Staphylococcus aureus W45755_111412	1418263	PRJNA227509	227509	Terrabacteria group	Firmicutes	2.78948	32.8	-	JGFP01	200	2936	2743	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402386	GCA_000601865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/865/GCA_000601865.1_Stap_aure_W45755_111412_V1	-	W45755_111412
Staphylococcus aureus F12749	1418264	PRJNA227510	227510	Terrabacteria group	Firmicutes	2.84545	32.8	-	JGFQ01	77	2976	2832	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402387	GCA_000601885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/885/GCA_000601885.1_Stap_aure_F12749_V1	-	F12749
Salmonella enterica subsp. enterica serovar Agona	58095	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.97724	51.9	-	MYSH01	71	5120	4863	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368974	GCA_002056815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/815/GCA_002056815.1_ASM205681v1	-	BCW_4377
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.00193	50.6	-	LGLX01	251	5283	4885	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03784982	GCA_001911465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/465/GCA_001911465.1_ASM191146v1	-	3693
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32737	65.4	-	CNKP01	164	4320	4052	3/23/15	3/12/17	Scaffold	SC	SAMEA1018883	GCA_001391855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/855/GCA_001391855.1_6570_6_8	-	Bir 340
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07698	39.7	-	CRPZ01	77	2291	2081	3/23/15	3/10/17	Scaffold	SC	SAMEA1024680	GCA_001155305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/305/GCA_001155305.1_6775_2_17	-	SMRU857
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.12524	39.5	-	CKAJ01	73	2329	2094	3/21/15	3/10/17	Scaffold	SC	SAMEA974699	GCA_001155385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/385/GCA_001155385.1_6259_6_18	-	19A
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28679	65.3	-	CNIR01	180	4295	4039	3/22/15	3/12/17	Scaffold	SC	SAMEA1018884	GCA_001391875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/875/GCA_001391875.1_6540_8_15	-	Bir 300
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	4.9794	50.8	-	LGLZ01	149	5287	4830	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03784984	GCA_001911485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/485/GCA_001911485.1_ASM191148v1	-	15617a
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.97584	52.1	-	MYSI01	92	5171	4907	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368973	GCA_002056835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/835/GCA_002056835.1_ASM205683v1	-	BCW_4376
Staphylococcus aureus F12753	1418265	PRJNA227511	227511	Terrabacteria group	Firmicutes	2.89176	32.8	-	JGFR01	101	3019	2864	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402388	GCA_000601905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/905/GCA_000601905.1_Stap_aure_F12753_V1	-	F12753
Staphylococcus aureus F19955	1418266	PRJNA227512	227512	Terrabacteria group	Firmicutes	2.79773	32.8	-	JGFS01	134	2933	2757	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402389	GCA_000601925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/925/GCA_000601925.1_Stap_aure_F19955_V1	-	F19955
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.97722	52.1	-	MYSK01	76	5184	4919	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368971	GCA_002056845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/845/GCA_002056845.1_ASM205684v1	-	BCW_4374
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.00098	50.5	-	LGMA01	193	5452	4845	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03784985	GCA_001911495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/495/GCA_001911495.1_ASM191149v1	-	963a-1
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.35537	65.5	-	CNME01	150	4317	4068	3/23/15	3/12/17	Scaffold	SC	SAMEA1018885	GCA_001391895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/895/GCA_001391895.1_7054_1_19	-	Bir 418
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.1573	39.6	-	CLOT01	63	2397	2159	3/21/15	3/10/17	Scaffold	SC	SAMEA1028714	GCA_001155505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/505/GCA_001155505.1_6949_2_17	-	SMRU2441
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.03139	39.8	-	CPSD01	239	2175	2004	3/22/15	3/10/17	Scaffold	SC	SAMEA682286	GCA_001155585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/585/GCA_001155585.1_5381_2_2	-	09B03635
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28834	65.4	-	CNEZ01	318	4359	3995	3/23/15	3/12/17	Scaffold	SC	SAMEA1018889	GCA_001391915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/915/GCA_001391915.1_6540_2_18	-	Bir 160
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.02998	50.6	-	LGME01	289	5422	4896	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03784989	GCA_001911505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/505/GCA_001911505.1_ASM191150v1	-	8255a
Salmonella enterica subsp. enterica serovar Agona	58095	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.01223	52	-	MYSJ01	88	5178	4913	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368972	GCA_002056865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/865/GCA_002056865.1_ASM205686v1	-	BCW_4375
Staphylococcus aureus F87602	1418267	PRJNA227513	227513	Terrabacteria group	Firmicutes	2.75164	32.9	-	JGFT01	154	2879	2705	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402390	GCA_000601945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/945/GCA_000601945.1_Stap_aure_F87602_V1	-	F87602
Staphylococcus aureus F91072	1418268	PRJNA227514	227514	Terrabacteria group	Firmicutes	2.82772	32.8	-	JGFU01	72	3001	2806	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402391	GCA_000601965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/965/GCA_000601965.1_Stap_aure_F91072_V1	-	F91072
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.01521	52.1	-	MYSQ01	72	5234	4969	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368965	GCA_002056915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/915/GCA_002056915.1_ASM205691v1	-	BCW_4368
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.11901	50.7	-	LGMI01	233	5481	4977	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03784993	GCA_001911545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/545/GCA_001911545.1_ASM191154v1	-	9571a
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32576	65.4	-	CNGV01	181	4314	4025	3/23/15	3/12/17	Scaffold	SC	SAMEA1018890	GCA_001391935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/935/GCA_001391935.1_6540_5_22	-	Bir 232
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.13676	39.6	-	CKBW01	78	2373	2143	3/21/15	3/11/17	Scaffold	SC	SAMEA974641	GCA_001155625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/625/GCA_001155625.1_6259_8_6	-	19B
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04302	39.6	-	CJZS01	57	2253	2053	3/21/15	3/10/17	Scaffold	SC	SAMEA974684	GCA_001155765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/765/GCA_001155765.1_6259_5_21	-	35F
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32251	65.5	-	CNMP01	159	4302	4061	3/23/15	3/12/17	Scaffold	SC	SAMEA1018891	GCA_001391955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/955/GCA_001391955.1_7054_1_34	-	Bir 433
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.50975	50.4	-	LGML01	282	6150	5575	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03784996	GCA_001911555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/555/GCA_001911555.1_ASM191155v1	-	700377
Salmonella enterica subsp. enterica serovar Agona	58095	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.03737	51.9	-	MYSR01	321	5347	4934	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368964	GCA_002056925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/925/GCA_002056925.1_ASM205692v1	-	BCW_4367
Staphylococcus aureus F91077	1418269	PRJNA227515	227515	Terrabacteria group	Firmicutes	2.83751	32.7	-	JGFV01	30	2983	2813	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402392	GCA_000601985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/985/GCA_000601985.1_Stap_aure_F91077_V1	-	F91077
Staphylococcus aureus M72054	1418270	PRJNA227516	227516	Terrabacteria group	Firmicutes	2.88642	32.7	-	JGFW01	35	3050	2870	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402393	GCA_000602005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/005/GCA_000602005.1_Stap_aure_M72054_V1	-	M72054
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.12222	52	-	MYST01	86	5323	5047	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368963	GCA_002056945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/945/GCA_002056945.1_ASM205694v1	-	BCW_4365
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.1708	50.6	-	LGMP01	119	5497	5030	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03785000	GCA_001911585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/585/GCA_001911585.1_ASM191158v1	-	503210
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32731	65.4	-	CNHV01	178	4306	4014	3/23/15	3/12/17	Scaffold	SC	SAMEA1018892	GCA_001391975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/975/GCA_001391975.1_6540_6_9	-	Bir 243
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10938	39.7	-	CKFU01	97	2262	1966	3/21/15	3/10/17	Scaffold	SC	SAMEA1024107	GCA_001155805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/805/GCA_001155805.1_6630_4_13	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12821	39.5	-	CRKU01	59	2325	2106	3/23/15	3/4/17	Scaffold	SC	SAMEA1025401	GCA_001155825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/825/GCA_001155825.1_6753_4_18	-	SMRU1554
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30392	65.4	-	CNGR01	170	4298	4028	3/23/15	3/12/17	Scaffold	SC	SAMEA1018896	GCA_001391995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/391/995/GCA_001391995.1_6540_5_15	-	Bir 225
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.09681	50.8	-	LGMN01	211	5467	4895	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03784998	GCA_001911595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/595/GCA_001911595.1_ASM191159v1	-	200144
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.96885	52.1	-	MYSS01	113	5176	4828	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358065	GCA_002056955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/955/GCA_002056955.1_ASM205695v1	-	BCW_4366
Staphylococcus aureus M72087	1418271	PRJNA227517	227517	Terrabacteria group	Firmicutes	2.82174	32.8	-	JGFX01	93	2985	2803	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402394	GCA_000602025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/025/GCA_000602025.1_Stap_aure_M72087_V1	-	M72087
Staphylococcus aureus T16600	1418272	PRJNA227518	227518	Terrabacteria group	Firmicutes	2.71516	32.8	-	JGFY01	158	2832	2627	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402395	GCA_000602045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/045/GCA_000602045.1_Stap_aure_T16600_V1	-	T16600
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.34494	51.8	-	MYSY01	372	5660	5236	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358064	GCA_002057005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/005/GCA_002057005.1_ASM205700v1	-	BCW_4360
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.32329	50.4	-	LGMV01	334	5915	5138	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03785007	GCA_001911615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/615/GCA_001911615.1_ASM191161v1	-	702251
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33289	65.4	-	CNGP01	174	4320	4053	3/23/15	3/12/17	Scaffold	SC	SAMEA1018897	GCA_001392015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/015/GCA_001392015.1_6540_5_19	-	Bir 229
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.036	39.7	-	CLZE01	70	2232	2025	3/21/15	3/4/17	Scaffold	SC	SAMEA1028750	GCA_001155925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/925/GCA_001155925.1_6983_8_77	-	SMRU2381
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.22232	39.4	-	CLFC01	85	2443	2199	3/21/15	3/4/17	Scaffold	SC	SAMEA1026208	GCA_001155945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/945/GCA_001155945.1_6899_7_16	-	SMRU2104
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29764	65.3	-	CNHS01	153	4297	4041	3/23/15	3/12/17	Scaffold	SC	SAMEA1018898	GCA_001392035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/035/GCA_001392035.1_6540_6_5	-	Bir 239
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.2801	50.5	-	LGMW01	173	5618	5150	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03785006	GCA_001911635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/635/GCA_001911635.1_ASM191163v1	-	402594
Salmonella enterica subsp. enterica serovar Agona	58095	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.03295	52	-	MYTA01	89	5205	4950	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368957	GCA_002057015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/015/GCA_002057015.1_ASM205701v1	-	BCW_4358
Staphylococcus aureus T16615	1418273	PRJNA227519	227519	Terrabacteria group	Firmicutes	2.82188	32.8	-	JGFZ01	151	2975	2794	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402396	GCA_000602065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/065/GCA_000602065.1_Stap_aure_T16615_V1	-	T16615
Staphylococcus aureus T16619	1418274	PRJNA227520	227520	Terrabacteria group	Firmicutes	2.81615	32.8	-	JGGA01	144	2944	2763	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402397	GCA_000602085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/085/GCA_000602085.1_Stap_aure_T16619_V1	-	T16619
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.97487	52.1	-	MYSZ01	51	5158	4834	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368958	GCA_002057025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/025/GCA_002057025.1_ASM205702v1	-	BCW_4359
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.01377	50.8	-	LGMX01	167	5274	4801	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03785008	GCA_001911665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/665/GCA_001911665.1_ASM191166v1	-	702332
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.2692	65.4	-	CNLS01	171	4278	4015	3/23/15	3/12/17	Scaffold	SC	SAMEA1018899	GCA_001392055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/055/GCA_001392055.1_6570_8_22	-	Bir 403
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.0985	39.5	-	CMLP01	50	2315	2070	3/23/15	3/4/17	Scaffold	SC	SAMEA1029304	GCA_001156025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/025/GCA_001156025.1_7054_6_21	-	SMRU3093
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.09771	39.5	-	CLXA01	48	2307	2068	3/21/15	3/4/17	Scaffold	SC	SAMEA1028766	GCA_001156125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/125/GCA_001156125.1_6983_5_2	-	SMRU2306
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.3553	65.4	-	CNFF01	180	4336	4046	3/23/15	3/12/17	Scaffold	SC	SAMEA1018900	GCA_001392075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/075/GCA_001392075.1_6540_2_20	-	Bir 162
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.1666	50.6	-	LGMZ01	160	5506	5040	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03785010	GCA_001911675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/675/GCA_001911675.1_ASM191167v1	-	603388
Salmonella enterica subsp. enterica serovar Agona	58095	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.00196	52	-	MYTB01	437	5366	4868	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368956	GCA_002057065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/065/GCA_002057065.1_ASM205706v1	-	BCW_4357
Staphylococcus aureus W75229	1418275	PRJNA227521	227521	Terrabacteria group	Firmicutes	2.92186	32.8	-	JGGB01	42	3122	2945	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402398	GCA_000602105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/105/GCA_000602105.1_Stap_aure_W75229_V1	-	W75229
Staphylococcus aureus W75234	1418276	PRJNA227522	227522	Terrabacteria group	Firmicutes	2.81232	32.8	-	JGGC01	93	2961	2769	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402399	GCA_000602125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/125/GCA_000602125.1_Stap_aure_W75234_V1	-	W75234
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.94539	52.1	-	MYTC01	209	5232	4799	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368955	GCA_002057075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/075/GCA_002057075.1_ASM205707v1	-	BCW_4356
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.03622	50.8	-	LGNA01	137	5375	4913	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03785011	GCA_001911695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/695/GCA_001911695.1_ASM191169v1	-	203518
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32808	65.4	-	CNIL01	159	4275	4020	3/23/15	3/12/17	Scaffold	SC	SAMEA1018904	GCA_001392095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/095/GCA_001392095.1_6540_7_8	-	Bir 269
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.15559	39.6	-	CMBX01	66	2395	2162	3/21/15	3/4/17	Scaffold	SC	SAMEA1029321	GCA_001156145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/145/GCA_001156145.1_7004_7_62	-	SMRU2894
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.17161	39.5	-	CRBL01	66	2424	2181	3/22/15	3/4/17	Scaffold	SC	SAMEA1024738	GCA_001156165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/165/GCA_001156165.1_6730_8_21	-	SMRU741
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32714	65.5	-	CNMZ01	179	4304	4046	3/23/15	3/12/17	Scaffold	SC	SAMEA1018905	GCA_001392115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/115/GCA_001392115.1_7054_2_75	-	Bir 474
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.3141	50.6	-	LGNE01	194	5698	5145	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03785015	GCA_001911725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/725/GCA_001911725.1_ASM191172v1	-	505077
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.95233	52.1	-	MYTE01	164	5191	4890	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368953	GCA_002057085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/085/GCA_002057085.1_ASM205708v1	-	BCW_4353
Staphylococcus aureus W82215	1418277	PRJNA227523	227523	Terrabacteria group	Firmicutes	2.87829	32.8	-	JGGD01	22	3036	2866	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402400	GCA_000602145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/145/GCA_000602145.1_Stap_aure_W82215_V1	-	W82215
Staphylococcus aureus W85806_020613	1418278	PRJNA227524	227524	Terrabacteria group	Firmicutes	2.7441	32.8	-	JGGE01	128	2858	2650	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402401	GCA_000602165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/165/GCA_000602165.1_Stap_aure_W85806_020613_V1	-	W85806_020613
Salmonella enterica subsp. enterica serovar Cubana	189201	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.19615	51.9	-	MYTG01	240	5406	5015	3/21/17	4/10/17	Contig	University of California at Davis	SAMN02368951	GCA_002057115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/115/GCA_002057115.1_ASM205711v1	-	BCW_4351
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.04952	50.7	-	LGMH01	146	5316	4878	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03784992	GCA_001911745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/745/GCA_001911745.1_ASM191174v1	-	9343a
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32788	65.4	-	CNKL01	160	4310	4044	3/23/15	3/12/17	Scaffold	SC	SAMEA1018906	GCA_001392135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/135/GCA_001392135.1_6570_6_4	-	Bir 336
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07718	39.6	-	CQUW01	48	2288	2062	3/23/15	3/4/17	Scaffold	SC	SAMEA1025203	GCA_001156225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/225/GCA_001156225.1_6710_6_7	-	SMRU1351
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11518	39.7	-	CQZM01	71	2326	2095	3/23/15	3/4/17	Scaffold	SC	SAMEA1024785	GCA_001156245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/245/GCA_001156245.1_6730_5_21	-	SMRU669
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28273	65.3	-	CNFC01	330	4356	3977	3/23/15	3/12/17	Scaffold	SC	SAMEA1018907	GCA_001392155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/155/GCA_001392155.1_6540_2_19	-	Bir 161
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	4.98888	50.9	-	LGNF01	134	5268	4836	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03785016	GCA_001911755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/755/GCA_001911755.1_ASM191175v1	-	403885
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.05036	52.2	-	MYTJ01	490	5470	4944	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368949	GCA_002057125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/125/GCA_002057125.1_ASM205712v1	-	BCW_4348
Staphylococcus aureus W85837	1418279	PRJNA227525	227525	Terrabacteria group	Firmicutes	2.91717	32.8	-	JGGF01	28	3100	2937	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402402	GCA_000602185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/185/GCA_000602185.1_Stap_aure_W85837_V1	-	W85837
Staphylococcus aureus W89581	1418280	PRJNA227526	227526	Terrabacteria group	Firmicutes	2.92231	32.7	-	JGGG01	91	3087	2902	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402403	GCA_000602205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/205/GCA_000602205.1_Stap_aure_W89581_V1	-	W89581
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.92903	52.2	-	MYOT01	75	5015	4767	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358434	GCA_002057155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/155/GCA_002057155.1_ASM205715v1	-	BCW_4899
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	4.82504	50.5	-	LGMK01	147	5164	4725	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03784995	GCA_001911775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/775/GCA_001911775.1_ASM191177v1	-	10380a
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30594	65.3	-	CNGQ01	196	4308	4013	3/23/15	3/12/17	Scaffold	SC	SAMEA1018908	GCA_001392175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/175/GCA_001392175.1_6540_5_14	-	Bir 224
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.09558	39.8	-	CQWK01	137	2214	1992	3/23/15	3/4/17	Scaffold	SC	SAMEA1024554	GCA_001156305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/305/GCA_001156305.1_6714_7_21	-	SMRU765
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.08307	39.7	-	CPLM01	96	2293	2102	3/22/15	3/4/17	Scaffold	SC	SAMEA682434	GCA_001156345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/345/GCA_001156345.1_5366_3_8	-	08B04036
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31369	65.4	-	CNHK01	164	4299	4035	3/22/15	3/12/17	Scaffold	SC	SAMEA1018909	GCA_001392195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/195/GCA_001392195.1_6540_6_20	-	Bir 255
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.33227	50.4	-	LGMS01	201	5777	5145	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03785003	GCA_001911805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/805/GCA_001911805.1_ASM191180v1	-	100664
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.85404	52.2	-	MYOU01	39	4968	4729	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358433	GCA_002057185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/185/GCA_002057185.1_ASM205718v1	-	BCW_4898
Staphylococcus aureus F32629	1418281	PRJNA227570	227570	Terrabacteria group	Firmicutes	2.8426	32.8	-	JGGH01	62	2968	2825	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402494	GCA_000602225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/225/GCA_000602225.1_Stap_aure_F32629_V1	-	F32629
Staphylococcus aureus F42559	1418283	PRJNA227572	227572	Terrabacteria group	Firmicutes	2.88297	32.8	-	JGGI01	46	3027	2883	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402496	GCA_000602245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/245/GCA_000602245.1_Stap_aure_F42559_V1	-	F42559
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.51009	52.2	-	MYOV01	64	4537	4282	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358432	GCA_002057195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/195/GCA_002057195.1_ASM205719v1	-	BCW_4897
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.24364	50.7	-	LGMU01	153	5648	5191	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03785005	GCA_001911825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/825/GCA_001911825.1_ASM191182v1	-	602687
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.27551	65.4	-	CNGT01	213	4316	4013	3/23/15	3/12/17	Scaffold	SC	SAMEA1018912	GCA_001392215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/215/GCA_001392215.1_6540_5_18	-	Bir 228
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07631	39.6	-	CKGC01	116	2285	2043	3/21/15	3/10/17	Scaffold	SC	SAMEA1024123	GCA_001156425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/425/GCA_001156425.1_6630_4_24	-	14
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.1178	39.5	-	CKBS01	61	2349	2121	3/21/15	3/10/17	Scaffold	SC	SAMEA974639	GCA_001156525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/525/GCA_001156525.1_6259_8_4	-	23F
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.27243	65.4	-	CNLL01	189	4311	4012	3/23/15	3/12/17	Scaffold	SC	SAMEA1018913	GCA_001392235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/235/GCA_001392235.1_6570_8_12	-	Bir 393
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.06993	50.8	-	LGNB01	135	5333	4866	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03785012	GCA_001911845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/845/GCA_001911845.1_ASM191184v1	-	403418
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70209	52.2	-	MYOW01	61	4773	4540	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358431	GCA_002057205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/205/GCA_002057205.1_ASM205720v1	-	BCW_4896
Staphylococcus aureus F48959	1418290	PRJNA227579	227579	Terrabacteria group	Firmicutes	2.81905	32.7	-	JGGJ01	15	2970	2820	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402503	GCA_000602265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/265/GCA_000602265.1_Stap_aure_F48959_V1	-	F48959
Staphylococcus aureus F52326	1418291	PRJNA227580	227580	Terrabacteria group	Firmicutes	2.87042	32.8	-	JGGK01	47	3031	2872	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402504	GCA_000602285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/285/GCA_000602285.1_Stap_aure_F52326_V1	-	F52326
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.6638	52.2	-	MYOY01	35	4709	4493	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358429	GCA_002057275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/275/GCA_002057275.1_ASM205727v1	-	BCW_4894
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.35621	50.6	-	LGMY01	300	5722	5295	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03785009	GCA_001911855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/855/GCA_001911855.1_ASM191185v1	-	703098
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30727	65.4	-	CNFG01	238	4309	4011	3/23/15	3/12/17	Scaffold	SC	SAMEA1018914	GCA_001392255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/255/GCA_001392255.1_6540_2_21	-	Bir 164
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.13085	39.6	-	CLMO01	54	2345	2092	3/21/15	3/10/17	Scaffold	SC	SAMEA1028898	GCA_001156585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/585/GCA_001156585.1_6938_7_2	-	SMRU2690
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.01827	39.7	-	CMDH01	52	2232	1993	3/21/15	3/10/17	Scaffold	SC	SAMEA1029145	GCA_001156605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/605/GCA_001156605.1_7011_3_17	-	SMRU2753
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.3246	65.4	-	CNKN01	166	4318	4045	3/22/15	3/12/17	Scaffold	SC	SAMEA1018918	GCA_001392275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/275/GCA_001392275.1_6570_6_6	-	Bir 338
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.22419	50.7	-	LGND01	138	5573	5122	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03785014	GCA_001911865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/865/GCA_001911865.1_ASM191186v1	-	603936
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.76896	52.1	-	MYPC01	70	4839	4585	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358425	GCA_002057285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/285/GCA_002057285.1_ASM205728v1	-	BCW_4890
Staphylococcus aureus F71576	1418294	PRJNA227583	227583	Terrabacteria group	Firmicutes	2.91165	32.8	-	JGGL01	18	3086	2936	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402507	GCA_000602305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/305/GCA_000602305.1_Stap_aure_F71576_V1	-	F71576
Staphylococcus aureus F74820	1418295	PRJNA227584	227584	Terrabacteria group	Firmicutes	2.88353	32.7	-	JGGM01	16	3038	2871	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402508	GCA_000602325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/325/GCA_000602325.1_Stap_aure_F74820_V1	-	F74820
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80266	52.1	-	MYPJ01	84	4919	4647	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358401	GCA_002057295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/295/GCA_002057295.1_ASM205729v1	-	BCW_4863
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	4.88765	50.9	-	LGLY01	259	5332	4756	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03784983	GCA_001911905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/905/GCA_001911905.1_ASM191190v1	-	12684a
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32304	65.5	-	CNMS01	179	4305	4072	3/23/15	3/12/17	Scaffold	SC	SAMEA1018920	GCA_001392295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/295/GCA_001392295.1_7054_1_36	-	Bir 435
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.05426	39.5	-	CKKP01	49	2239	2018	3/21/15	3/11/17	Scaffold	SC	SAMEA1023693	GCA_001156665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/665/GCA_001156665.1_6631_7_18	-	48
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.11093	39.5	-	CLOA01	79	2349	2103	3/21/15	3/10/17	Scaffold	SC	SAMEA1028948	GCA_001156725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/725/GCA_001156725.1_6949_1_15	-	SMRU2415
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.3271	65.4	-	CNHU01	174	4320	4027	3/22/15	3/12/17	Scaffold	SC	SAMEA1018921	GCA_001392315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/315/GCA_001392315.1_6540_6_6	-	Bir 240
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.31813	50.5	-	LGMB01	203	5757	5139	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03784986	GCA_001911925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/925/GCA_001911925.1_ASM191192v1	-	1030c-1
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.76815	52.1	-	MYPM01	62	4856	4641	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358398	GCA_002057335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/335/GCA_002057335.1_ASM205733v1	-	BCW_4860
Staphylococcus aureus H15899	1418298	PRJNA227587	227587	Terrabacteria group	Firmicutes	2.81309	32.8	-	JGGN01	32	2950	2793	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402511	GCA_000602345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/345/GCA_000602345.1_Stap_aure_H15899_V1	-	H15899
Staphylococcus aureus H19398	1418301	PRJNA227590	227590	Terrabacteria group	Firmicutes	2.87315	32.7	-	JGGO01	19	3030	2872	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402514	GCA_000602365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/365/GCA_000602365.1_Stap_aure_H19398_V1	-	H19398
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.53531	52.2	-	MYPK01	35	4566	4336	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358400	GCA_002057345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/345/GCA_002057345.1_ASM205734v1	-	BCW_4862
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.05216	50.6	-	LGMD01	171	5447	4899	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03784988	GCA_001911935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/935/GCA_001911935.1_ASM191193v1	-	4155a
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.2938	65.4	-	CNKM01	165	4280	4011	3/22/15	3/12/17	Scaffold	SC	SAMEA1018923	GCA_001392335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/335/GCA_001392335.1_6570_6_5	-	Bir 337
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.14331	39.7	-	CRUP01	57	2336	2106	3/22/15	3/11/17	Scaffold	SC	SAMEA1025376	GCA_001156765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/765/GCA_001156765.1_6805_6_12	-	SMRU1716
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.06841	39.8	-	CPLN01	87	2279	2009	3/23/15	3/10/17	Scaffold	SC	SAMEA682357	GCA_001156825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/825/GCA_001156825.1_5366_8_10	-	09B01302
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32367	65.4	-	CNKH01	162	4291	4041	3/22/15	3/12/17	Scaffold	SC	SAMEA1018924	GCA_001392355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/355/GCA_001392355.1_6570_6_20	-	Bir 352
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.4981	50.8	-	LGMC01	250	5914	5368	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03784987	GCA_001911955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/955/GCA_001911955.1_ASM191195v1	-	1241a
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.87487	52.1	-	MYPN01	67	5020	4746	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358397	GCA_002057365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/365/GCA_002057365.1_ASM205736v1	-	BCW_4859
Staphylococcus aureus H19404	1418302	PRJNA227591	227591	Terrabacteria group	Firmicutes	2.90382	32.7	-	JGGP01	58	3084	2913	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402515	GCA_000602385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/385/GCA_000602385.1_Stap_aure_H19404_V1	-	H19404
Staphylococcus aureus H19420	1418303	PRJNA227592	227592	Terrabacteria group	Firmicutes	2.89482	32.7	-	JGGQ01	18	3060	2893	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402516	GCA_000602405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/405/GCA_000602405.1_Stap_aure_H19420_V1	-	H19420
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.84526	52.1	-	MYPQ01	95	4987	4657	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358394	GCA_002057395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/395/GCA_002057395.1_ASM205739v1	-	BCW_4856
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.02488	50.7	-	LGMF01	136	5334	4911	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03784990	GCA_001911985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/911/985/GCA_001911985.1_ASM191198v1	-	8350a
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33911	65.4	-	CNHL01	138	4314	4067	3/22/15	3/12/17	Scaffold	SC	SAMEA1018925	GCA_001392375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/375/GCA_001392375.1_6540_6_21	-	Bir 256
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14362	39.5	-	CILY01	143	2350	2068	3/21/15	3/11/17	Scaffold	SC	SAMEA1024147	GCA_001156865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/865/GCA_001156865.1_6630_2_11	-	5
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07979	39.7	-	CRLN01	60	2294	2082	3/22/15	3/10/17	Scaffold	SC	SAMEA1024889	GCA_001156905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/905/GCA_001156905.1_6755_1_22	-	SMRU790
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30374	65.4	-	CNLQ01	173	4300	4023	3/23/15	3/12/17	Scaffold	SC	SAMEA1018927	GCA_001392395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/395/GCA_001392395.1_6570_8_21	-	Bir 402
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	4.94038	50.6	-	LGMG01	158	5147	4806	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03784991	GCA_001912005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/005/GCA_001912005.1_ASM191200v1	-	9312a
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.77099	52.2	-	MYPR01	68	4864	4633	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358393	GCA_002057435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/435/GCA_002057435.1_ASM205743v1	-	BCW_4855
Staphylococcus aureus H43694	1418308	PRJNA227597	227597	Terrabacteria group	Firmicutes	2.888	32.7	-	JGGR01	15	3049	2893	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402521	GCA_000602425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/425/GCA_000602425.1_Stap_aure_H43694_V1	-	H43694
Staphylococcus aureus H47117	1418310	PRJNA227599	227599	Terrabacteria group	Firmicutes	2.86424	32.7	-	JGGS01	15	3004	2865	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402523	GCA_000602445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/445/GCA_000602445.1_Stap_aure_H47117_V1	-	H47117
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89499	52.1	-	MYPS01	93	5053	4769	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358392	GCA_002057445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/445/GCA_002057445.1_ASM205744v1	-	BCW_4854
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	4.95453	50.6	-	LGMJ01	130	5238	4763	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03784994	GCA_001912015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/015/GCA_001912015.1_ASM191201v1	-	9788a
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.34457	65.5	-	CNLE01	170	4294	4059	3/22/15	3/12/17	Scaffold	SC	SAMEA1018928	GCA_001392415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/415/GCA_001392415.1_6570_7_7	-	Bir 363
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.97114	39.8	-	CJZW01	64	2165	1932	3/21/15	3/10/17	Scaffold	SC	SAMEA974692	GCA_001156925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/925/GCA_001156925.1_6259_5_4	-	10A
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09785	39.4	-	CKLI01	68	2329	2091	3/21/15	3/10/17	Scaffold	SC	SAMEA1023790	GCA_001156945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/945/GCA_001156945.1_6641_6_16	-	10B
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31857	65.4	-	CNKZ01	163	4312	4043	3/23/15	3/12/17	Scaffold	SC	SAMEA1018929	GCA_001392435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/435/GCA_001392435.1_6570_7_22	-	Bir 379
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.19358	50.6	-	LGMM01	176	5594	5141	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03784997	GCA_001912035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/035/GCA_001912035.1_ASM191203v1	-	300659
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89602	52.1	-	MYPU01	85	5051	4768	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358390	GCA_002057495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/495/GCA_002057495.1_ASM205749v1	-	BCW_4852
Staphylococcus aureus H81898	1418311	PRJNA227600	227600	Terrabacteria group	Firmicutes	2.80759	32.7	-	JGGT01	33	2935	2783	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402524	GCA_000602465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/465/GCA_000602465.1_Stap_aure_H81898_V1	-	H81898
Staphylococcus aureus M20726	1418320	PRJNA227609	227609	Terrabacteria group	Firmicutes	2.88991	32.7	-	JGGU01	19	3066	2898	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402533	GCA_000602485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/485/GCA_000602485.1_Stap_aure_M20726_V1	-	M20726
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.84675	52.1	-	MYPX01	78	4960	4732	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358387	GCA_002057505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/505/GCA_002057505.1_ASM205750v1	-	BCW_4849
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.4741	50.3	-	LGMO01	183	5790	5315	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03784999	GCA_001912055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/055/GCA_001912055.1_ASM191205v1	-	200617
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33328	65.4	-	CNLZ01	184	4325	4059	3/22/15	3/12/17	Scaffold	SC	SAMEA1018931	GCA_001392455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/455/GCA_001392455.1_7054_1_14	-	Bir 413
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.07909	39.7	-	CLAF01	69	2298	2091	3/21/15	3/10/17	Scaffold	SC	SAMEA1026242	GCA_001157005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/005/GCA_001157005.1_6840_3_24	-	SMRU1824
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.17182	39.5	-	CPUK01	101	2383	2146	3/23/15	3/11/17	Scaffold	SC	SAMEA1020237	GCA_001157045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/045/GCA_001157045.1_6246_3_15	-	LMG1250
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33937	65.5	-	CNNB01	162	4306	4064	3/23/15	3/12/17	Scaffold	SC	SAMEA1018932	GCA_001392475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/475/GCA_001392475.1_7054_2_76	-	Bir 475
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.01823	50.5	-	LGMQ01	110	5321	4812	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03785001	GCA_001912085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/085/GCA_001912085.1_ASM191208v1	-	401909
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69539	52.1	-	MYQN01	36	4818	4541	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358281	GCA_002057555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/555/GCA_002057555.1_ASM205755v1	-	BCW_4683
Staphylococcus aureus M42212	1418325	PRJNA227614	227614	Terrabacteria group	Firmicutes	2.94209	32.7	-	JGGV01	16	3125	2964	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402538	GCA_000602505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/505/GCA_000602505.1_Stap_aure_M42212_V1	-	M42212
Staphylococcus aureus M57729	1418328	PRJNA227617	227617	Terrabacteria group	Firmicutes	2.89891	32.7	-	JGGW01	20	3065	2906	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402541	GCA_000602525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/525/GCA_000602525.1_Stap_aure_M57729_V1	-	M57729
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.62929	52.3	-	MYQE01	52	4698	4446	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358380	GCA_002057565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/565/GCA_002057565.1_ASM205756v1	-	BCW_4842
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	4.73729	50.6	-	LGMR01	139	4983	4607	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03785002	GCA_001912105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/105/GCA_001912105.1_ASM191210v1	-	401900
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.24056	65.3	-	CNGN01	190	4279	4003	3/23/15	3/12/17	Scaffold	SC	SAMEA1018934	GCA_001392495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/495/GCA_001392495.1_6540_5_13	-	Bir 223
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.3106	39.4	-	CMJU01	79	2563	2279	3/23/15	3/11/17	Scaffold	SC	SAMEA1026044	GCA_001157125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/125/GCA_001157125.1_7038_8_35	-	SMRU2243
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.03431	39.6	-	CKMZ01	79	2245	2009	3/21/15	3/10/17	Scaffold	SC	SAMEA1024065	GCA_001157145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/145/GCA_001157145.1_6649_8_3	-	34
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29068	65.4	-	CNLI01	211	4314	4024	3/22/15	3/12/17	Scaffold	SC	SAMEA1018935	GCA_001392515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/515/GCA_001392515.1_6570_8_11	-	Bir 392
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.2492	50.4	-	LGNC01	128	5695	5182	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03785013	GCA_001912115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/115/GCA_001912115.1_ASM191211v1	-	703200
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89524	52.1	-	MYQK01	83	5042	4767	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358374	GCA_002057575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/575/GCA_002057575.1_ASM205757v1	-	BCW_4835
Staphylococcus aureus M79667	1418331	PRJNA227620	227620	Terrabacteria group	Firmicutes	2.90819	32.7	-	JGGX01	22	3090	2937	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402544	GCA_000602545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/545/GCA_000602545.1_Stap_aure_M79667_V1	-	M79667
Staphylococcus aureus M90383	1418334	PRJNA227623	227623	Terrabacteria group	Firmicutes	2.81928	32.8	-	JGGY01	37	2953	2792	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402547	GCA_000602565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/565/GCA_000602565.1_Stap_aure_M90383_V1	-	M90383
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69653	52.1	-	MYQR01	33	4800	4550	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358277	GCA_002057585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/585/GCA_002057585.1_ASM205758v1	-	BCW_4679
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.15257	50.6	-	LGMT01	172	5572	5107	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN03785004	GCA_001912145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/145/GCA_001912145.1_ASM191214v1	-	302025
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.34186	65.5	-	CNMF01	169	4324	4059	3/23/15	3/12/17	Scaffold	SC	SAMEA1018936	GCA_001392535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/535/GCA_001392535.1_7054_1_20	-	Bir 419
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14804	39.5	-	CKJD01	83	2385	2124	3/21/15	3/10/17	Scaffold	SC	SAMEA1023770	GCA_001157285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/285/GCA_001157285.1_6631_5_11	-	21
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.06106	39.6	-	CREB01	59	2295	2038	3/23/15	3/11/17	Scaffold	SC	SAMEA1024972	GCA_001157325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/325/GCA_001157325.1_6731_5_11	-	SMRU1091
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30506	65.4	-	CNLN01	176	4329	4043	3/23/15	3/12/17	Scaffold	SC	SAMEA1018941	GCA_001392555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/555/GCA_001392555.1_6570_8_2	-	Bir 383
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	4.86768	50.5	-	LRKB01	163	5078	4701	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420123	GCA_001912185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/185/GCA_001912185.1_ASM191218v1	-	202733
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69575	52.1	-	MYQT01	37	4811	4540	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358275	GCA_002057645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/645/GCA_002057645.1_ASM205764v1	-	BCW_4677
Staphylococcus aureus T42550	1418339	PRJNA227628	227628	Terrabacteria group	Firmicutes	2.89311	32.7	-	JGGZ01	25	3064	2893	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402552	GCA_000602585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/585/GCA_000602585.1_Stap_aure_T42550_V1	-	T42550
Staphylococcus aureus T47161	1418342	PRJNA227631	227631	Terrabacteria group	Firmicutes	2.89427	32.7	-	JGHA01	20	3058	2895	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402555	GCA_000602605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/605/GCA_000602605.1_Stap_aure_T47161_V1	-	T47161
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70383	52.1	-	MYRB01	46	4836	4560	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358267	GCA_002057665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/665/GCA_002057665.1_ASM205766v1	-	BCW_4669
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.02999	50.8	-	LRAK01	242	5518	4801	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04415413	GCA_001912195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/195/GCA_001912195.1_ASM191219v1	-	602748
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.27401	65.5	-	CNHM01	144	4270	4000	3/22/15	3/12/17	Scaffold	SC	SAMEA1018944	GCA_001392575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/575/GCA_001392575.1_6540_6_22	-	Bir 259
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.16458	39.5	-	CRHX01	47	2387	2164	3/23/15	3/4/17	Scaffold	SC	SAMEA1025382	GCA_001157405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/405/GCA_001157405.1_6736_8_19	-	SMRU1315
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.15093	39.5	-	CMPV01	88	2423	2179	3/23/15	3/4/17	Scaffold	SC	SAMEA2061471	GCA_001157445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/445/GCA_001157445.1_9803_7_7	-	23A
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30992	65.4	-	CNKF01	175	4298	4024	3/23/15	3/12/17	Scaffold	SC	SAMEA1018948	GCA_001392595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/595/GCA_001392595.1_6570_6_2	-	Bir 334
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.13114	50.7	-	LRKG01	286	5686	4979	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420239	GCA_001912225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/225/GCA_001912225.1_ASM191222v1	-	300735
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69793	52.1	-	MYRE01	36	4810	4557	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358264	GCA_002057675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/675/GCA_002057675.1_ASM205767v1	-	BCW_4666
Staphylococcus aureus W19225	1418357	PRJNA227646	227646	Terrabacteria group	Firmicutes	2.87062	32.8	-	JGHB01	25	3007	2872	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402570	GCA_000602625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/625/GCA_000602625.1_Stap_aure_W19225_V1	-	W19225
Staphylococcus aureus W35455	1418361	PRJNA227650	227650	Terrabacteria group	Firmicutes	2.91775	32.7	-	JGHC01	23	3048	2910	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402574	GCA_000602645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/645/GCA_000602645.1_Stap_aure_W35455_V1	-	W35455
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.73114	52.1	-	MYRO01	47	4856	4597	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358254	GCA_002057725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/725/GCA_002057725.1_ASM205772v1	-	BCW_4656
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.43495	50.3	-	LRKI01	154	5709	5223	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420241	GCA_001912235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/235/GCA_001912235.1_ASM191223v1	-	600555
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29817	65.4	-	CNHR01	171	4294	4039	3/23/15	3/12/17	Scaffold	SC	SAMEA1018949	GCA_001392615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/615/GCA_001392615.1_6540_6_3	-	Bir 237
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.06544	39.7	-	CMAA01	50	2256	2003	3/21/15	3/6/17	Scaffold	SC	SAMEA1028710	GCA_001157505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/505/GCA_001157505.1_7004_5_15	-	SMRU2871
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.10977	39.8	-	CPRG01	260	2306	2126	3/23/15	3/4/17	Scaffold	SC	SAMEA682334	GCA_001157525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/525/GCA_001157525.1_5381_1_5	-	09B02346
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.34473	65.5	-	CNMD01	161	4329	4060	3/23/15	3/12/17	Scaffold	SC	SAMEA1018950	GCA_001392635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/635/GCA_001392635.1_7054_1_17	-	Bir 416
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.29935	50.7	-	LRKO01	198	5704	5116	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420265	GCA_001912265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/265/GCA_001912265.1_ASM191226v1	-	401624
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.695	52.1	-	MYRM01	23	4802	4552	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358256	GCA_002057755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/755/GCA_002057755.1_ASM205775v1	-	BCW_4658
Staphylococcus aureus W42196	1418363	PRJNA227652	227652	Terrabacteria group	Firmicutes	2.85177	32.8	-	JGHD01	34	2981	2820	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402576	GCA_000602665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/665/GCA_000602665.1_Stap_aure_W42196_V1	-	W42196
Staphylococcus aureus W42270	1418365	PRJNA227654	227654	Terrabacteria group	Firmicutes	2.89106	32.7	-	JGHE01	20	3032	2891	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402578	GCA_000602685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/685/GCA_000602685.1_Stap_aure_W42270_V1	-	W42270
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69867	52.1	-	MYRQ01	42	4802	4550	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358251	GCA_002057775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/775/GCA_002057775.1_ASM205777v1	-	BCW_4652
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.26563	50.5	-	LRKL01	164	5673	5135	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420262	GCA_001912275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/275/GCA_001912275.1_ASM191227v1	-	200907
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30865	65.4	-	CNJJ01	168	4288	4025	3/23/15	3/12/17	Scaffold	SC	SAMEA1018954	GCA_001392655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/655/GCA_001392655.1_6570_5_17	-	Bir 325
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.17192	39.5	-	CPSS01	89	2392	2185	3/23/15	3/4/17	Scaffold	SC	SAMEA682292	GCA_001157545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/545/GCA_001157545.1_5392_5_7	-	spnIC54
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.24175	39.8	-	CKQU01	190	2462	2184	3/21/15	3/4/17	Scaffold	SC	SAMEA1024789	GCA_001157605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/605/GCA_001157605.1_6680_6_8	-	SMRU944
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.26781	65.3	-	CNGW01	212	4306	4010	3/23/15	3/12/17	Scaffold	SC	SAMEA1018957	GCA_001392675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/675/GCA_001392675.1_6540_5_16	-	Bir 226
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.10289	50.6	-	LRKQ01	191	5532	4926	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420271	GCA_001912305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/305/GCA_001912305.1_ASM191230v1	-	102265
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.10762	52	-	MYRU01	117	5330	5069	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358073	GCA_002057815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/815/GCA_002057815.1_ASM205781v1	-	BCW_4390
Staphylococcus aureus W52298	1418370	PRJNA227659	227659	Terrabacteria group	Firmicutes	2.86397	32.7	-	JGHF01	23	3027	2866	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402583	GCA_000602705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/705/GCA_000602705.1_Stap_aure_W52298_V1	-	W52298
Staphylococcus aureus F31078	1418378	PRJNA227667	227667	Terrabacteria group	Firmicutes	2.86997	32.8	-	JGHG01	12	3018	2854	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402591	GCA_000602725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/725/GCA_000602725.1_Stap_aure_F31078_V1	-	F31078
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.97343	52.1	-	MYRZ01	210	5265	4813	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358068	GCA_002057855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/855/GCA_002057855.1_ASM205785v1	-	BCW_4385
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.22314	50.9	-	LRKT01	261	5795	5119	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420278	GCA_001912315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/315/GCA_001912315.1_ASM191231v1	-	302031
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32087	65.3	-	CNLD01	155	4307	4023	3/22/15	3/12/17	Scaffold	SC	SAMEA1018958	GCA_001392695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/695/GCA_001392695.1_6570_8_10	-	Bir 391
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.0824	39.5	-	CMAK01	61	2275	2059	3/21/15	3/4/17	Scaffold	SC	SAMEA1028679	GCA_001157625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/625/GCA_001157625.1_7004_6_25	-	SMRU2833
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21524	39.5	-	CPMX01	100	2455	2218	3/22/15	3/4/17	Scaffold	SC	SAMEA1408327	GCA_001157645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/645/GCA_001157645.1_7444_8_18	-	9707+14101
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.26961	65.3	-	CNGO01	195	4299	4005	3/23/15	3/12/17	Scaffold	SC	SAMEA1018959	GCA_001392715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/715/GCA_001392715.1_6540_5_17	-	Bir 227
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.13637	50.7	-	LRLA01	165	5484	4957	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420291	GCA_001912345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/345/GCA_001912345.1_ASM191234v1	-	503698
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.97221	52.1	-	MYSC01	96	5163	4908	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368978	GCA_002057865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/865/GCA_002057865.1_ASM205786v1	-	BCW_4382
Staphylococcus aureus F34824	1418379	PRJNA227668	227668	Terrabacteria group	Firmicutes	2.89353	32.8	-	JGHH01	64	3040	2885	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402592	GCA_000602745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/745/GCA_000602745.1_Stap_aure_F34824_V1	-	F34824
Staphylococcus aureus F48607	1418384	PRJNA227673	227673	Terrabacteria group	Firmicutes	2.94054	32.7	-	JGHI01	33	3134	2974	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402597	GCA_000602765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/765/GCA_000602765.1_Stap_aure_F48607_V1	-	F48607
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.16092	52.1	-	MYSD01	204	5419	5102	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358066	GCA_002057915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/915/GCA_002057915.1_ASM205791v1	-	BCW_4381
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.18579	50.8	-	LRKZ01	162	5548	5110	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420290	GCA_001912365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/365/GCA_001912365.1_ASM191236v1	-	603030
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30535	65.4	-	CNLA01	173	4322	4044	3/23/15	3/12/17	Scaffold	SC	SAMEA1018960	GCA_001392735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/735/GCA_001392735.1_6570_7_24	-	Bir 381
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12445	39.6	-	CLQV01	46	2340	2074	3/21/15	3/15/17	Scaffold	SC	SAMEA1029027	GCA_001157665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/665/GCA_001157665.1_6949_4_9	-	SMRU2481
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11451	39.5	-	CRED01	58	2324	2092	3/23/15	3/4/17	Scaffold	SC	SAMEA1024910	GCA_001157705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/705/GCA_001157705.1_6731_5_16	-	SMRU1096
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30552	65.4	-	CNKK01	169	4286	4021	3/22/15	3/12/17	Scaffold	SC	SAMEA1018962	GCA_001392755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/755/GCA_001392755.1_6570_6_3	-	Bir 335
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	4.96995	51	-	LRLC01	402	5597	4642	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420293	GCA_001912375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/375/GCA_001912375.1_ASM191237v1	-	503647
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.90684	52.1	-	MYSL01	107	5073	4810	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368970	GCA_002057935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/935/GCA_002057935.1_ASM205793v1	-	BCW_4373
Staphylococcus aureus F48611	1418385	PRJNA227674	227674	Terrabacteria group	Firmicutes	2.90516	32.7	-	JGHJ01	27	3063	2908	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402598	GCA_000602785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/785/GCA_000602785.1_Stap_aure_F48611_V1	-	F48611
Staphylococcus aureus H12890	1418390	PRJNA227679	227679	Terrabacteria group	Firmicutes	2.85594	32.7	-	JGHL01	20	2992	2824	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402603	GCA_000602825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/825/GCA_000602825.1_Stap_aure_H12890_V1	-	H12890
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.15007	52.2	-	MYSM01	121	5364	5087	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368969	GCA_002057985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/985/GCA_002057985.1_ASM205798v1	-	BCW_4372
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.27376	50.4	-	LRLE01	84	5432	5005	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420708	GCA_001912385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/385/GCA_001912385.1_ASM191238v1	-	102928
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32429	65.4	-	CNHQ01	159	4302	4037	3/23/15	3/12/17	Scaffold	SC	SAMEA1018963	GCA_001392775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/775/GCA_001392775.1_6540_6_4	-	Bir 238
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21734	39.5	-	CPQD01	110	2463	2212	3/23/15	3/4/17	Scaffold	SC	SAMEA1408226	GCA_001157825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/825/GCA_001157825.1_7444_8_88	-	0507+08068
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09492	39.7	-	CLHX01	51	2314	2094	3/21/15	3/4/17	Scaffold	SC	SAMEA1026254	GCA_001157845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/845/GCA_001157845.1_6925_6_12	-	SMRU2196
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31881	65.4	-	CNFI01	187	4330	4037	3/23/15	3/12/17	Scaffold	SC	SAMEA1018967	GCA_001392795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/795/GCA_001392795.1_6540_2_6	-	Bir 148
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	4.95038	50.8	-	LRLF01	210	5311	4723	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420709	GCA_001912425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/425/GCA_001912425.1_ASM191242v1	-	402286
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.12655	52.2	-	MYSF01	107	5326	5076	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368976	GCA_002058005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/058/005/GCA_002058005.1_ASM205800v1	-	BCW_4379
Staphylococcus aureus H20315	1418391	PRJNA227680	227680	Terrabacteria group	Firmicutes	2.87416	32.7	-	JGHM01	22	3049	2894	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402604	GCA_000602845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/845/GCA_000602845.1_Stap_aure_H20315_V1	-	H20315
Staphylococcus aureus H50411	1418397	PRJNA227686	227686	Terrabacteria group	Firmicutes	2.93551	32.7	-	JGHN01	23	3126	2954	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402610	GCA_000602865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/865/GCA_000602865.1_Stap_aure_H50411_V1	-	H50411
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.99074	52.2	-	MYSN01	77	5180	4929	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368968	GCA_002058035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/058/035/GCA_002058035.1_ASM205803v1	-	BCW_4371
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.32145	50.7	-	LRLI01	198	5750	5144	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420752	GCA_001912445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/445/GCA_001912445.1_ASM191244v1	-	702331
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33588	65.4	-	CNJO01	185	4337	4036	3/22/15	3/12/17	Scaffold	SC	SAMEA1018968	GCA_001392815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/815/GCA_001392815.1_6570_5_19	-	Bir 327
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07581	39.6	-	CKFM01	71	2259	2000	3/21/15	3/15/17	Scaffold	SC	SAMEA1023740	GCA_001157885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/885/GCA_001157885.1_6630_3_23	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.03623	39.7	-	CMFB01	143	2246	2034	3/21/15	3/11/17	Scaffold	SC	SAMEA1029034	GCA_001157965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/965/GCA_001157965.1_7011_6_10	-	SMRU2818
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.25071	65.4	-	CNID01	183	4275	4015	3/22/15	3/12/17	Scaffold	SC	SAMEA1018969	GCA_001392835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/835/GCA_001392835.1_6540_7_13	-	Bir 274
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	4.87269	50.8	-	LRLJ01	311	5413	4635	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420757	GCA_001912455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/455/GCA_001912455.1_ASM191245v1	-	702947
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.04924	52.1	-	MYSU01	1811	5883	4793	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368962	GCA_002058075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/058/075/GCA_002058075.1_ASM205807v1	-	BCW_4364
Staphylococcus aureus M66407	1418409	PRJNA227698	227698	Terrabacteria group	Firmicutes	2.89546	32.8	-	JGHO01	58	3027	2880	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402622	GCA_000602885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/885/GCA_000602885.1_Stap_aure_M66407_V1	-	M66407
Staphylococcus aureus M67929_020413	1418411	PRJNA227700	227700	Terrabacteria group	Firmicutes	2.88165	32.7	-	JGHP01	11	3040	2880	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402624	GCA_000602905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/905/GCA_000602905.1_Stap_aure_M67929_020413_V1	-	M67929_020413
Salmonella enterica subsp. enterica serovar Agona	58095	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.02175	52	-	MYSW01	126	5215	4928	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368960	GCA_002058085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/058/085/GCA_002058085.1_ASM205808v1	-	BCW_4362
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.09808	50.9	-	LRMA01	194	5521	5051	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04421283	GCA_001912475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/475/GCA_001912475.1_ASM191247v1	-	100197
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33694	65.5	-	CNMH01	175	4337	4084	3/23/15	3/12/17	Scaffold	SC	SAMEA1018972	GCA_001392855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/855/GCA_001392855.1_7054_1_23	-	Bir 422
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12014	39.7	-	CMPD01	59	2372	2145	3/23/15	3/11/17	Scaffold	SC	SAMEA2061715	GCA_001158105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/105/GCA_001158105.1_9803_7_46	-	6C
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.02163	40	-	CPSL01	80	2199	1947	3/22/15	3/11/17	Scaffold	SC	SAMEA1020560	GCA_001158145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/145/GCA_001158145.1_6289_7_3	-	SN28652
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32357	65.5	-	CNMI01	174	4304	4069	3/23/15	3/12/17	Scaffold	SC	SAMEA1018973	GCA_001392875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/875/GCA_001392875.1_7054_1_26	-	Bir 425
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.09756	50.7	-	LRMB01	170	5497	4999	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04421284	GCA_001912485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/485/GCA_001912485.1_ASM191248v1	-	100451
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.97287	52	-	MYSX01	856	5571	4811	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368959	GCA_002058105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/058/105/GCA_002058105.1_ASM205810v1	-	BCW_4361
Staphylococcus aureus M67957	1418413	PRJNA227702	227702	Terrabacteria group	Firmicutes	2.97858	32.7	-	JGHQ01	15	3164	2999	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402626	GCA_000602925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/925/GCA_000602925.1_Stap_aure_M67957_V1	-	M67957
Staphylococcus aureus M79654	1418415	PRJNA227704	227704	Terrabacteria group	Firmicutes	2.85117	32.8	-	JGHR01	45	2982	2855	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402628	GCA_000602945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/945/GCA_000602945.1_Stap_aure_M79654_V1	-	M79654
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.97192	52.1	-	MYTD01	599	5486	4787	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358063	GCA_002058155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/058/155/GCA_002058155.1_ASM205815v1	-	BCW_4354
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.40806	50.4	-	LRMD01	140	5712	5208	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04421843	GCA_001912525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/525/GCA_001912525.1_ASM191252v1	-	601028
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31401	65.4	-	CNLK01	173	4331	4059	3/23/15	3/12/17	Scaffold	SC	SAMEA1018975	GCA_001392895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/895/GCA_001392895.1_6570_8_17	-	Bir 398
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.18107	39.5	-	CPLY01	84	2413	2164	3/23/15	3/11/17	Scaffold	SC	SAMEA1408233	GCA_001158185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/185/GCA_001158185.1_7444_8_56	-	0111+21110
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.09306	39.7	-	CLMX01	59	2256	2013	3/21/15	3/11/17	Scaffold	SC	SAMEA1029158	GCA_001158205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/205/GCA_001158205.1_6938_8_13	-	SMRU2725
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.2854	65.4	-	CNFL01	169	4303	4021	3/22/15	3/12/17	Scaffold	SC	SAMEA1018976	GCA_001392915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/915/GCA_001392915.1_6540_3_1	-	Bir 169
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.2614	50.6	-	LRKD01	231	5750	5075	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420206	GCA_001912545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/545/GCA_001912545.1_ASM191254v1	-	700328
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.41848	51.7	-	MYTF01	525	5929	5320	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368952	GCA_002058205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/058/205/GCA_002058205.1_ASM205820v1	-	BCW_4352
Staphylococcus aureus T22073	1418419	PRJNA227708	227708	Terrabacteria group	Firmicutes	2.78103	32.7	-	JGHS01	41	2904	2755	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402632	GCA_000602965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/965/GCA_000602965.1_Stap_aure_T22073_V1	-	T22073
Staphylococcus aureus W24177	1418426	PRJNA227715	227715	Terrabacteria group	Firmicutes	2.87835	32.7	-	JGHT01	25	3034	2872	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402639	GCA_000602985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/602/985/GCA_000602985.1_Stap_aure_W24177_V1	-	W24177
Salmonella enterica subsp. enterica	59201	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.94173	52.1	-	MYSP01	75	5136	4874	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368966	GCA_002058255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/058/255/GCA_002058255.1_ASM205825v1	-	BCW_4369
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.05261	50.7	-	LRKA01	252	5342	4917	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420122	GCA_001912555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/555/GCA_001912555.1_ASM191255v1	-	202545
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28787	65.4	-	CNJM01	164	4285	4000	3/22/15	3/12/17	Scaffold	SC	SAMEA1018977	GCA_001392935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/935/GCA_001392935.1_6570_5_18	-	Bir 326
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11589	39.5	-	CRBG01	58	2352	2112	3/22/15	3/11/17	Scaffold	SC	SAMEA1025066	GCA_001158225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/225/GCA_001158225.1_6730_8_5	-	SMRU725
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.14395	39.4	-	CLRQ01	81	2401	2156	3/21/15	3/11/17	Scaffold	SC	SAMEA1029120	GCA_001158265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/265/GCA_001158265.1_6972_2_5	-	SMRU2549
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31527	65.4	-	CNJL01	174	4319	4017	3/23/15	3/12/17	Scaffold	SC	SAMEA1018980	GCA_001392955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/955/GCA_001392955.1_6570_5_20	-	Bir 328
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.55785	50.3	-	LRKC01	174	5864	5337	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420125	GCA_001912565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/565/GCA_001912565.1_ASM191256v1	-	700324
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.11272	52	-	MYTI01	205	5348	5007	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368950	GCA_002058285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/058/285/GCA_002058285.1_ASM205828v1	-	BCW_4349
Staphylococcus aureus W41765	1418433	PRJNA227722	227722	Terrabacteria group	Firmicutes	2.92279	32.7	-	JGHU01	21	3098	2940	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402646	GCA_000603005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/005/GCA_000603005.1_Stap_aure_W41765_V1	-	W41765
Staphylococcus aureus W80011	1418438	PRJNA227727	227727	Terrabacteria group	Firmicutes	2.83023	32.8	-	JGHV01	51	2969	2823	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402651	GCA_000603025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/025/GCA_000603025.1_Stap_aure_W80011_V1	-	W80011
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.13379	51.9	-	MYTM01	71	5348	5088	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03358061	GCA_002058315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/058/315/GCA_002058315.1_ASM205831v1	-	BCW_4345
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.10131	50.6	-	LRKE01	234	5609	5015	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420207	GCA_001912605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/605/GCA_001912605.1_ASM191260v1	-	700239
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30691	65.4	-	CNLW01	169	4294	4036	3/23/15	3/12/17	Scaffold	SC	SAMEA1018981	GCA_001392975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/975/GCA_001392975.1_6570_8_8	-	Bir 389
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.06169	39.7	-	CPUT01	112	2275	2075	3/23/15	3/11/17	Scaffold	SC	SAMEA682362	GCA_001158285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/285/GCA_001158285.1_5366_6_11	-	08B09703
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.07041	39.7	-	CPOM01	71	2281	2083	3/23/15	3/10/17	Scaffold	SC	SAMEA682369	GCA_001158325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/325/GCA_001158325.1_5366_5_11	-	08B07107
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30018	65.4	-	CNLM01	162	4288	4027	3/22/15	3/12/17	Scaffold	SC	SAMEA1018987	GCA_001393015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/015/GCA_001393015.1_6570_8_16	-	Bir 397
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.11684	50.9	-	LRKM01	279	5659	4916	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420263	GCA_001912615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/615/GCA_001912615.1_ASM191261v1	-	500487
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.176	51.9	-	MYTO01	144	5412	5088	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368945	GCA_002058335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/058/335/GCA_002058335.1_ASM205833v1	-	BCW_4343
Staphylococcus aureus W80041	1418440	PRJNA227729	227729	Terrabacteria group	Firmicutes	2.89024	32.7	-	JGHW01	22	3052	2890	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402653	GCA_000603045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/045/GCA_000603045.1_Stap_aure_W80041_V1	-	W80041
Staphylococcus aureus W80042	1418441	PRJNA227730	227730	Terrabacteria group	Firmicutes	2.89344	32.7	-	JGHX01	21	3058	2892	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402654	GCA_000603065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/065/GCA_000603065.1_Stap_aure_W80042_V1	-	W80042
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.88762	52.2	-	MYTP01	97	5035	4776	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03357979	GCA_002058405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/058/405/GCA_002058405.1_ASM205840v1	-	BCW_4234
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.13718	50.9	-	LRKN01	202	5530	4992	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420264	GCA_001912625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/625/GCA_001912625.1_ASM191262v1	-	500883
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32079	65.4	-	CNLV01	162	4318	4043	3/23/15	3/12/17	Scaffold	SC	SAMEA1018989	GCA_001393035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/035/GCA_001393035.1_6570_8_7	-	Bir 388
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10954	39.8	-	CRDR01	80	2290	2050	3/23/15	3/11/17	Scaffold	SC	SAMEA1024721	GCA_001158385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/385/GCA_001158385.1_6731_4_23	-	SMRU1079
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11532	39.5	-	CMRP01	68	2335	2108	3/23/15	3/11/17	Scaffold	SC	SAMEA2061747	GCA_001158405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/405/GCA_001158405.1_9803_8_46	-	23F
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33362	65.4	-	CNHZ01	183	4323	4040	3/22/15	3/12/17	Scaffold	SC	SAMEA1018990	GCA_001393055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/055/GCA_001393055.1_6540_7_11	-	Bir 272
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.11404	50.7	-	LRKS01	168	5488	4947	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420273	GCA_001912665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/665/GCA_001912665.1_ASM191266v1	-	102148
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72564	52.3	-	MYTR01	43	4813	4576	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03357977	GCA_002058415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/058/415/GCA_002058415.1_ASM205841v1	-	BCW_4232
Staphylococcus aureus F64891	1421840	PRJNA227820	227820	Terrabacteria group	Firmicutes	2.91701	32.8	-	JGHY01	70	3088	2915	3/27/14	3/3/17	Contig	Broad Institute	SAMN02403130	GCA_000603085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/085/GCA_000603085.1_Stap_aure_F64891_V1	-	F64891
Staphylococcus aureus F71592	1421844	PRJNA227824	227824	Terrabacteria group	Firmicutes	2.88997	32.7	-	JGHZ01	20	3051	2890	3/27/14	3/3/17	Contig	Broad Institute	SAMN02403134	GCA_000603105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/105/GCA_000603105.1_Stap_aure_F71592_V1	-	F71592
Salmonella enterica subsp. enterica serovar Mbandaka	192954	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.76262	52	-	MYTS01	811	5244	4476	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368828	GCA_002058425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/058/425/GCA_002058425.1_ASM205842v1	-	BCW_4018
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.20744	50.9	-	LRKX01	247	5658	4951	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420288	GCA_001912675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/675/GCA_001912675.1_ASM191267v1	-	602646
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32105	65.4	-	CNJP01	182	4321	4019	3/23/15	3/12/17	Scaffold	SC	SAMEA1018991	GCA_001393075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/075/GCA_001393075.1_6570_5_21	-	Bir 329
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.03998	39.7	-	CRHE01	60	2252	2032	3/23/15	3/10/17	Scaffold	SC	SAMEA1025326	GCA_001158425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/425/GCA_001158425.1_6736_7_10	-	SMRU1282
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.04476	39.6	-	CRMI01	78	2261	2024	3/23/15	3/10/17	Scaffold	SC	SAMEA1024981	GCA_001158465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/465/GCA_001158465.1_6755_2_6	-	SMRU798
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29053	65.4	-	CNLO01	176	4301	4013	3/22/15	3/12/17	Scaffold	SC	SAMEA1018993	GCA_001393095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/095/GCA_001393095.1_6570_8_20	-	Bir 401
Escherichia coli	562	PRJNA287625	287625	Proteobacteria	Gammaproteobacteria	5.11667	50.7	-	LRLB01	157	5437	4977	12/21/16	2/26/17	Contig	Universidad de Chile	SAMN04420292	GCA_001912705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/912/705/GCA_001912705.1_ASM191270v1	-	503688
Salmonella enterica subsp. enterica serovar Paratyphi B	57045	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66693	52.2	-	MYTT01	69	4745	4491	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368827	GCA_002058475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/058/475/GCA_002058475.1_ASM205847v1	-	BCW_4017
Staphylococcus aureus F91084	1421845	PRJNA227825	227825	Terrabacteria group	Firmicutes	2.93036	32.7	-	JGIA01	26	3118	2951	3/27/14	3/3/17	Contig	Broad Institute	SAMN02403135	GCA_000603125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/125/GCA_000603125.1_Stap_aure_F91084_V1	-	F91084
Staphylococcus aureus H47139	1421850	PRJNA227830	227830	Terrabacteria group	Firmicutes	2.82278	32.8	-	JGIB01	69	2980	2815	3/27/14	3/3/17	Contig	Broad Institute	SAMN02403140	GCA_000603145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/145/GCA_000603145.1_Stap_aure_H47139_V1	-	H47139
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.52876	52.2	-	MYTW01	77	4542	4293	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03357946	GCA_002058485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/058/485/GCA_002058485.1_ASM205848v1	-	BCW_4014
Escherichia coli	562	PRJNA354234	354234	Proteobacteria	Gammaproteobacteria	5.08714	50.6	-	MPSK01	130	5248	4945	1/4/17	2/26/17	Contig	New Jersey Medical School-Rutgers University	SAMN06043600	GCA_001931785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/931/785/GCA_001931785.1_ASM193178v1	-	4626_wz
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.34184	65.4	-	CNHW01	164	4326	4049	3/22/15	3/12/17	Scaffold	SC	SAMEA1018994	GCA_001393115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/115/GCA_001393115.1_6540_7_10	-	Bir 271
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14927	39.6	-	CRQQ01	80	2390	2150	3/22/15	3/14/17	Scaffold	SC	SAMEA1024983	GCA_001158485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/485/GCA_001158485.1_6791_6_14	-	SMRU638
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11978	39.5	-	CIMH01	68	2322	2069	3/21/15	3/11/17	Scaffold	SC	SAMEA1023902	GCA_001158565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/565/GCA_001158565.1_6631_7_10	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31127	65.4	-	CNFJ01	173	4314	4055	3/22/15	3/12/17	Scaffold	SC	SAMEA1018995	GCA_001393135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/135/GCA_001393135.1_6540_2_4	-	Bir 146
Escherichia coli	562	PRJNA348397	348397	Proteobacteria	Gammaproteobacteria	5.89682	50.3	-	MLFF01	1050	6169	5607	1/6/17	3/2/17	Contig	LAU	SAMN05908142	GCA_001937985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/937/985/GCA_001937985.1_ASM193798v1	-	OXA-LEB
Salmonella enterica subsp. enterica serovar Hartford	568095	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.84791	52.1	-	MYTY01	153	4988	4684	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368823	GCA_002058515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/058/515/GCA_002058515.1_ASM205851v1	-	BCW_4012
Staphylococcus aureus H65856	1421852	PRJNA227832	227832	Terrabacteria group	Firmicutes	2.74088	32.8	-	JGIC01	96	2855	2728	3/27/14	3/3/17	Contig	Broad Institute	SAMN02403142	GCA_000603165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/165/GCA_000603165.1_Stap_aure_H65856_V1	-	H65856
Staphylococcus aureus H88188	1421868	PRJNA227848	227848	Terrabacteria group	Firmicutes	2.82769	32.8	-	JGID01	69	2957	2805	3/27/14	3/3/17	Contig	Broad Institute	SAMN02403158	GCA_000603185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/185/GCA_000603185.1_Stap_aure_H88188_V1	-	H88188
Salmonella enterica subsp. enterica serovar Anatum	58712	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.6289	52.2	-	MYUA01	117	4726	4462	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368821	GCA_002058525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/058/525/GCA_002058525.1_ASM205852v1	-	BCW_4010
Escherichia coli O157:H7	83334	PRJNA291880	291880	Proteobacteria	Gammaproteobacteria	5.64852	50.4558	plasmid pO157:NZ_CM007618.1/CM007618.1	MKIV01	6	6040	5499	1/6/17	2/26/17	Contig	United State Department of Agriculture	SAMN04447628	GCA_001939185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/939/185/GCA_001939185.1_ASM193918v1	-	1175
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33164	65.5	-	CNMO01	148	4309	4064	3/23/15	3/12/17	Scaffold	SC	SAMEA1018998	GCA_001393155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/155/GCA_001393155.1_7054_1_32	-	Bir 431
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.14566	39.6	-	CRGP01	72	2405	2153	3/23/15	3/11/17	Scaffold	SC	SAMEA1025631	GCA_001158605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/605/GCA_001158605.1_6736_6_13	-	SMRU1261
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.2326	39.5	-	CLNW01	95	2514	2276	3/21/15	3/11/17	Scaffold	SC	SAMEA1028997	GCA_001158645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/645/GCA_001158645.1_6949_1_11	-	SMRU2411
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33146	65.5	-	CNMT01	148	4306	4066	3/23/15	3/12/17	Scaffold	SC	SAMEA1018999	GCA_001393175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/175/GCA_001393175.1_7054_1_35	-	Bir 434
Escherichia coli	562	PRJNA344554	344554	Proteobacteria	Gammaproteobacteria	4.88951	50.7	-	MKGW01	137	5075	4748	1/11/17	2/26/17	Contig	"Faculte de Medecine, Universite Paris-Sud"	SAMN05829082	GCA_001942065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/065/GCA_001942065.1_ASM194206v1	-	85H4
Salmonella enterica subsp. enterica serovar Anatum	58712	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.61297	52.1	-	MYUB01	1126	5142	4251	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368820	GCA_002058585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/058/585/GCA_002058585.1_ASM205858v1	-	BCW_4009
Staphylococcus aureus T39105	1421891	PRJNA227871	227871	Terrabacteria group	Firmicutes	2.89062	32.7	-	JGIE01	84	3041	2850	3/27/14	3/3/17	Contig	Broad Institute	SAMN02403181	GCA_000603205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/205/GCA_000603205.1_Stap_aure_T39105_V1	-	T39105
Staphylococcus aureus W25799	1421908	PRJNA227888	227888	Terrabacteria group	Firmicutes	2.75584	32.8	-	JGIF01	70	2841	2667	3/27/14	3/3/17	Contig	Broad Institute	SAMN02403198	GCA_000603225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/225/GCA_000603225.1_Stap_aure_W25799_V1	-	W25799
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.98353	52	-	MYTL01	122	5147	4877	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368947	GCA_002058595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/058/595/GCA_002058595.1_ASM205859v1	-	BCW_4346
Escherichia coli	562	PRJNA344554	344554	Proteobacteria	Gammaproteobacteria	5.0923	50.5	-	MKGT01	262	5234	4916	1/11/17	2/26/17	Contig	"Faculte de Medecine, Universite Paris-Sud"	SAMN05828368	GCA_001942085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/085/GCA_001942085.1_ASM194208v1	-	78B5
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31811	65.4	-	CNLU01	169	4315	4023	3/23/15	3/12/17	Scaffold	SC	SAMEA1019001	GCA_001393195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/195/GCA_001393195.1_6570_8_6	-	Bir 387
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.131	39.6	-	CLUC01	77	2347	2091	3/21/15	3/10/17	Scaffold	SC	SAMEA1025873	GCA_001158725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/725/GCA_001158725.1_6983_2_11	-	SMRU2219
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.09007	39.7	-	CPSB01	78	2304	2091	3/22/15	3/11/17	Scaffold	SC	SAMEA682272	GCA_001158765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/765/GCA_001158765.1_5381_2_9	-	09B05642
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28782	65.3	-	CNFH01	200	4325	4004	3/22/15	3/12/17	Scaffold	SC	SAMEA1019002	GCA_001393215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/215/GCA_001393215.1_6540_2_23	-	Bir 167
Escherichia coli	562	PRJNA344554	344554	Proteobacteria	Gammaproteobacteria	4.87737	50.6	-	MKGV01	191	5013	4746	1/11/17	2/26/17	Contig	"Faculte de Medecine, Universite Paris-Sud"	SAMN05829086	GCA_001942095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/095/GCA_001942095.1_ASM194209v1	-	73G4
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.18562	51.9	-	MYTK01	591	5644	5062	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368948	GCA_002058605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/058/605/GCA_002058605.1_ASM205860v1	-	BCW_4347
Staphylococcus aureus W45758	1421912	PRJNA227892	227892	Terrabacteria group	Firmicutes	2.85406	32.8	-	JGIG01	70	3027	2860	3/27/14	3/3/17	Contig	Broad Institute	SAMN02403202	GCA_000603245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/245/GCA_000603245.1_Stap_aure_W45758_V1	-	W45758
Staphylococcus aureus W82238	1421913	PRJNA227893	227893	Terrabacteria group	Firmicutes	2.87491	32.8	-	JGIH01	77	3008	2870	3/27/14	3/3/17	Contig	Broad Institute	SAMN02403203	GCA_000603265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/265/GCA_000603265.1_Stap_aure_W82238_V1	-	W82238
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.97174	52.1	-	MYTN01	127	5189	4916	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368946	GCA_002058635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/058/635/GCA_002058635.1_ASM205863v1	-	BCW_4344
Escherichia coli	562	PRJNA344554	344554	Proteobacteria	Gammaproteobacteria	5.09965	50.6	-	MKGU01	192	5358	4980	1/11/17	2/26/17	Contig	"Faculte de Medecine, Universite Paris-Sud"	SAMN05828804	GCA_001942105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/105/GCA_001942105.1_86J1	-	86J1
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.27039	65.4	-	CNIA01	182	4277	4025	3/23/15	3/12/17	Scaffold	SC	SAMEA1019003	GCA_001393235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/235/GCA_001393235.1_6540_7_12	-	Bir 273
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12986	39.6	-	CLRB01	61	2354	2096	3/21/15	3/10/17	Scaffold	SC	SAMEA1028757	GCA_001158825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/825/GCA_001158825.1_6972_2_15	-	SMRU2559
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.95796	39.8	-	CQQM01	37	2157	1945	3/22/15	3/10/17	Scaffold	SC	SAMEA970229	GCA_001158845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/845/GCA_001158845.1_5159_5_7	-	BHN608
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.3214	65.5	-	CNMU01	183	4311	4074	3/23/15	3/12/17	Scaffold	SC	SAMEA1019004	GCA_001393255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/255/GCA_001393255.1_7054_1_39	-	Bir 438
Escherichia coli	562	PRJNA344554	344554	Proteobacteria	Gammaproteobacteria	5.47793	50.4	-	MKGX01	310	5787	5368	1/11/17	2/26/17	Contig	"Faculte de Medecine, Universite Paris-Sud"	SAMN05829077	GCA_001942145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/145/GCA_001942145.1_ASM194214v1	-	35j9
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.76207	52.2	-	MYTQ01	56	4921	4560	3/21/17	3/23/17	Contig	University of California at Davis	SAMN03357978	GCA_002058675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/058/675/GCA_002058675.1_ASM205867v1	-	BCW_4233
Staphylococcus aureus W13012_022013	1418425	PRJNA227714	227714	Terrabacteria group	Firmicutes	2.92903	32.7	-	JGMY01	27	3109	2944	3/27/14	3/3/17	Contig	Broad Institute	SAMN02402638	GCA_000604465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/465/GCA_000604465.1_Stap_aure_W13012_022013_V1	-	W13012_022013
Staphylococcus aureus DAR3769	1422163	PRJNA228246	228246	Terrabacteria group	Firmicutes	2.81034	32.8	-	JGNN01	16	2918	2754	3/20/14	3/3/17	Contig	Broad Institute	SAMN02403713	GCA_000622915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/915/GCA_000622915.1_Stap_aure_DAR3769_V1	-	DAR3769
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70323	52.2	-	MYTU01	150	4803	4525	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368826	GCA_002058685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/058/685/GCA_002058685.1_ASM205868v1	-	BCW_4016
Escherichia coli	562	PRJNA344554	344554	Proteobacteria	Gammaproteobacteria	4.9786	50.5	-	MKGY01	140	5016	4789	1/11/17	2/26/17	Contig	"Faculte de Medecine, Universite Paris-Sud"	SAMN05829114	GCA_001942165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/165/GCA_001942165.1_ASM194216v1	-	62D3
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30168	65.4	-	CNLG01	151	4317	4047	3/23/15	3/12/17	Scaffold	SC	SAMEA1019006	GCA_001393275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/275/GCA_001393275.1_6570_8_19	-	Bir 400
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.05707	39.6	-	CRBK01	79	2275	2026	3/23/15	3/11/17	Scaffold	SC	SAMEA1025105	GCA_001158865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/865/GCA_001158865.1_6730_8_7	-	SMRU727
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.00008	39.8	-	CKRT01	38	2189	1953	3/21/15	3/4/17	Scaffold	SC	SAMEA1023788	GCA_001158925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/925/GCA_001158925.1_6680_8_4	-	SMRU196
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31681	65.4	-	CNJN01	196	4328	4020	3/22/15	3/12/17	Scaffold	SC	SAMEA1019008	GCA_001393295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/295/GCA_001393295.1_6570_5_22	-	Bir 330
Escherichia coli	562	PRJNA344554	344554	Proteobacteria	Gammaproteobacteria	5.17019	50.5	-	MKGZ01	268	5302	4983	1/11/17	2/26/17	Contig	"Faculte de Medecine, Universite Paris-Sud"	SAMN05829116	GCA_001942175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/175/GCA_001942175.1_ASM194217v1	-	6.90E+07
Salmonella enterica subsp. enterica serovar Hartford	568095	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.81442	52.1	-	MYTX01	69	4866	4630	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368824	GCA_002058735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/058/735/GCA_002058735.1_ASM205873v1	-	BCW_4013
Staphylococcus aureus DAR3907	1422194	PRJNA228277	228277	Terrabacteria group	Firmicutes	2.91031	32.8	-	JGNO01	12	3051	2882	3/20/14	3/3/17	Contig	Broad Institute	SAMN02403744	GCA_000622935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/935/GCA_000622935.1_Stap_aure_DAR3907_V1	-	DAR3907
Staphylococcus aureus DAR2070	1422275	PRJNA228363	228363	Terrabacteria group	Firmicutes	2.79844	32.8	-	JGNP01	9	2893	2734	3/20/14	3/3/17	Contig	Broad Institute	SAMN02403825	GCA_000622955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/955/GCA_000622955.1_Stap_aure_DAR2070_V1	-	DAR2070
Salmonella enterica subsp. enterica serovar Litchfield	486998	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.77735	52.2	-	MYTV01	172	4895	4595	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368825	GCA_002058745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/058/745/GCA_002058745.1_ASM205874v1	-	BCW_4015
Escherichia coli	562	PRJDB5234	352958	Proteobacteria	Gammaproteobacteria	5.27149	50.4	-	BDLI01	250	5588	5085	12/17/16	2/26/17	Contig	"Division of Biomedical Food Research, NIHS"	SAMD00065523	GCA_001950695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/695/GCA_001950695.1_ASM195069v1	-	11226
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29132	65.4	-	CNLP01	167	4280	4001	3/23/15	3/12/17	Scaffold	SC	SAMEA1019010	GCA_001393315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/315/GCA_001393315.1_6570_8_18	-	Bir 399
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08041	39.6	-	CRRZ01	67	2305	2070	3/22/15	3/4/17	Scaffold	SC	SAMEA1025383	GCA_001158965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/965/GCA_001158965.1_6805_2_14	-	SMRU1430
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.19457	39.6	-	CLAY01	63	2376	2136	3/21/15	3/4/17	Scaffold	SC	SAMEA1025537	GCA_001159045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/045/GCA_001159045.1_6841_7_5	-	SMRU1325
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28361	65.4	-	CNFD01	163	4297	4035	3/23/15	3/12/17	Scaffold	SC	SAMEA1019012	GCA_001393335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/335/GCA_001393335.1_6540_2_24	-	Bir 168
Escherichia coli	562	PRJDB5234	352958	Proteobacteria	Gammaproteobacteria	5.34705	50.6	-	BDLJ01	246	5631	5198	12/17/16	2/26/17	Contig	"Division of Biomedical Food Research, NIHS"	SAMD00065524	GCA_001950715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/715/GCA_001950715.1_ASM195071v1	-	11229
Salmonella enterica subsp. enterica serovar Berta	28142	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.73998	52.2	-	MYTZ01	101	4843	4540	3/21/17	3/23/17	Contig	University of California at Davis	SAMN02368822	GCA_002058795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/058/795/GCA_002058795.1_ASM205879v1	-	BCW_4011
Staphylococcus aureus subsp. aureus 21267	904748	PRJNA53649	53649	Terrabacteria group	Firmicutes	2.75027	32.7	-	JHPU01	47	2883	2720	4/11/14	3/3/17	Contig	J. Craig Venter Institute	SAMN00117449	GCA_000626775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/775/GCA_000626775.1_gsa21267v01	-	21267
Staphylococcus aureus subsp. aureus 21239	904740	PRJNA53633	53633	Terrabacteria group	Firmicutes	2.75323	32.7	-	JHPT01	60	2891	2780	4/11/14	3/3/17	Contig	J. Craig Venter Institute	SAMN00116850	GCA_000626795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/795/GCA_000626795.1_gsa21239v01	-	21239
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.04942	52.1	-	MYSO01	109	5270	5011	3/21/17	3/24/17	Contig	University of California at Davis	SAMN02368967	GCA_002059255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/255/GCA_002059255.1_ASM205925v1	-	BCW_4370
Escherichia coli	562	PRJDB5234	352958	Proteobacteria	Gammaproteobacteria	5.3323	50.3	-	BDLK01	282	5788	5281	12/17/16	2/26/17	Contig	"Division of Biomedical Food Research, NIHS"	SAMD00065525	GCA_001950735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/735/GCA_001950735.1_ASM195073v1	-	11247
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.3353	65.4	-	CHIL01	175	4314	4053	4/21/15	3/12/17	Scaffold	SC	SAMEA1019013	GCA_001393355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/355/GCA_001393355.1_6570_8_5	-	Bir 386
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.18575	39.5	-	CPKS01	221	2380	2168	3/23/15	3/4/17	Scaffold	SC	SAMEA682253	GCA_001159065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/065/GCA_001159065.1_5390_1_3	-	spnIC38
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.081	39.7	-	CLLQ01	73	2327	2097	3/21/15	3/4/17	Scaffold	SC	SAMEA1029029	GCA_001159085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/085/GCA_001159085.1_6938_6_15	-	SMRU2679
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31331	65.4	-	CNGK01	200	4308	4037	3/23/15	3/12/17	Scaffold	SC	SAMEA1019014	GCA_001393375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/375/GCA_001393375.1_6540_4_23	-	Bir 215
Escherichia coli	562	PRJDB5234	352958	Proteobacteria	Gammaproteobacteria	5.24416	50.4	-	BDLL01	238	5518	5029	12/17/16	2/26/17	Contig	"Division of Biomedical Food Research, NIHS"	SAMD00065526	GCA_001950755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/755/GCA_001950755.1_ASM195075v1	-	15821
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89316	52.1	-	MYPL01	80	5038	4762	3/21/17	3/24/17	Contig	University of California at Davis	SAMN03358399	GCA_002059265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/265/GCA_002059265.1_ASM205926v1	-	BCW_4861
Staphylococcus aureus subsp. aureus CO-30	904796	PRJNA53827	53827	Terrabacteria group	Firmicutes	2.82222	32.7	-	JHQD01	55	2957	2754	4/11/14	3/3/17	Contig	J. Craig Venter Institute	SAMN00138226	GCA_000626835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/835/GCA_000626835.1_gsaco30v01	-	CO-30
Staphylococcus aureus subsp. aureus CO-41	904798	PRJNA53831	53831	Terrabacteria group	Firmicutes	2.82123	32.7	-	JHQE01	43	2959	2746	4/11/14	3/3/17	Contig	J. Craig Venter Institute	SAMN00138219	GCA_000626855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/855/GCA_000626855.1_gsaco41v01	-	CO-41
Salmonella enterica subsp. enterica serovar Javiana	363569	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.71906	52.1	-	MXQH01	1297	5358	4344	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368819	GCA_002059295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/295/GCA_002059295.1_ASM205929v1	-	BCW_4008
Escherichia coli	562	PRJDB5234	352958	Proteobacteria	Gammaproteobacteria	5.40491	50.5	-	BDLM01	135	5704	5311	12/17/16	2/26/17	Contig	"Division of Biomedical Food Research, NIHS"	SAMD00065527	GCA_001950775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/950/775/GCA_001950775.1_ASM195077v1	-	16309
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29814	65.4	-	CNLH01	184	4315	4036	3/23/15	3/12/17	Scaffold	SC	SAMEA1019016	GCA_001393395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/395/GCA_001393395.1_6570_8_13	-	Bir 394
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.2192	39.6	-	CPPW01	105	2468	2208	3/23/15	3/4/17	Scaffold	SC	SAMEA1020152	GCA_001159105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/105/GCA_001159105.1_6570_2_7	-	SPN13151
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.07923	39.7	-	CMFS01	75	2305	2096	3/21/15	3/4/17	Scaffold	SC	SAMEA1028926	GCA_001159125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/125/GCA_001159125.1_7011_6_20	-	SMRU2828
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31346	65.4	-	CNIC01	166	4308	4053	3/23/15	3/12/17	Scaffold	SC	SAMEA1019017	GCA_001393415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/415/GCA_001393415.1_6540_7_18	-	Bir 279
Escherichia coli	562	PRJNA362194	362194	Proteobacteria	Gammaproteobacteria	4.51608	50.9	-	MTKG01	670	4918	4397	1/19/17	2/26/17	Contig	University of Sao Paulo	SAMN05971811	GCA_001957205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/957/205/GCA_001957205.1_ASM195720v1	-	ICBEC3AM
Salmonella enterica subsp. enterica serovar Anatum	58712	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72055	52.2	-	MXQJ01	111	4831	4563	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368817	GCA_002059305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/305/GCA_002059305.1_ASM205930v1	-	BCW_4006
Staphylococcus aureus subsp. aureus CO-49	904799	PRJNA53833	53833	Terrabacteria group	Firmicutes	2.92992	32.7	-	JHQF01	50	3123	2916	4/11/14	3/3/17	Contig	J. Craig Venter Institute	SAMN00138221	GCA_000626875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/875/GCA_000626875.1_gsaco49v01	-	CO-49
Staphylococcus aureus subsp. aureus 21230	904736	PRJNA53625	53625	Terrabacteria group	Firmicutes	2.79083	32.7	-	JHPS01	75	2932	2719	4/11/14	3/3/17	Contig	J. Craig Venter Institute	SAMN00116849	GCA_000626915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/915/GCA_000626915.1_gsa21230v01	-	21230
Salmonella enterica subsp. enterica serovar Montevideo	115981	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72645	52.1	-	MXQL01	211	4867	4530	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368815	GCA_002059315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/315/GCA_002059315.1_ASM205931v1	-	BCW_4004
Escherichia coli	562	PRJNA322084	322084	Proteobacteria	Gammaproteobacteria	4.77694	50.7851	plasmid pEC1333:NZ_CM007643.1/CM007643.1	LYBS01	76	5018	4653	1/19/17	3/25/17	Contig	University of Sao Paulo	SAMN05013687	GCA_001957215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/957/215/GCA_001957215.1_ASM195721v1	-	Ec1333
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30617	65.4	-	CNJZ01	177	4331	4058	3/22/15	3/12/17	Scaffold	SC	SAMEA1019021	GCA_001393435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/435/GCA_001393435.1_6570_5_9	-	Bir 317
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05054	39.8	-	CLWY01	58	2265	2048	3/21/15	3/4/17	Scaffold	SC	SAMEA1029030	GCA_001159145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/145/GCA_001159145.1_6983_5_21	-	SMRU2325
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.16468	39.6	-	CRSZ01	53	2338	2033	3/23/15	3/6/17	Scaffold	SC	SAMEA1025263	GCA_001159245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/245/GCA_001159245.1_6805_3_8	-	SMRU1448
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30353	65.4	-	CNGA01	159	4298	4019	3/22/15	3/12/17	Scaffold	SC	SAMEA1019022	GCA_001393455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/455/GCA_001393455.1_6540_3_5	-	Bir 173
Escherichia coli	562	PRJNA362194	362194	Proteobacteria	Gammaproteobacteria	4.87661	50.8	-	MTKE01	534	5215	4809	1/19/17	2/26/17	Contig	University of Sao Paulo	SAMN05971374	GCA_001957225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/957/225/GCA_001957225.1_ASM195722v1	-	ICBEC2AM
Salmonella enterica subsp. enterica serovar Mississippi	913079	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.49999	52.2	-	MXQI01	400	4710	4259	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368818	GCA_002059325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/325/GCA_002059325.1_ASM205932v1	-	BCW_4007
Staphylococcus aureus subsp. aureus 21275	904751	PRJNA53655	53655	Terrabacteria group	Firmicutes	2.80357	32.7	-	JHPV01	48	2947	2727	4/11/14	3/3/17	Contig	J. Craig Venter Institute	SAMN00116842	GCA_000626935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/935/GCA_000626935.1_gsa21275v01	-	21275
Staphylococcus aureus subsp. aureus 21304	904758	PRJNA53669	53669	Terrabacteria group	Firmicutes	2.82486	32.7	-	JHPW01	38	2966	2799	4/11/14	3/3/17	Contig	J. Craig Venter Institute	SAMN00117451	GCA_000626955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/955/GCA_000626955.1_gsa21304v01	-	21304
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7484	52.1	-	MXQO01	537	5151	4540	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03357944	GCA_002059375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/375/GCA_002059375.1_ASM205937v1	-	BCW_4001
Escherichia coli	562	PRJNA361484	361484	Proteobacteria	Gammaproteobacteria	4.92848	50.6	-	MUAE01	304	5019	4690	2/1/17	2/26/17	Contig	University of Sao Paulo	SAMN06246910	GCA_001981465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/465/GCA_001981465.1_ASM198146v1	-	ICBEc10
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29604	65.4	-	CNJQ01	156	4311	4041	3/23/15	3/12/17	Scaffold	SC	SAMEA1019024	GCA_001393475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/475/GCA_001393475.1_6570_5_23	-	Bir 331
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.11088	39.7	-	CMUI01	181	2224	1959	3/23/15	3/6/17	Scaffold	SC	SAMEA1022928	GCA_001159265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/265/GCA_001159265.1_5737_6_12	-	155
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.19472	39.7	-	CLZF01	57	2400	2132	3/21/15	3/4/17	Scaffold	SC	SAMEA1028865	GCA_001159325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/325/GCA_001159325.1_6983_8_84	-	SMRU2388
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31856	65.4	-	CNIZ01	148	4284	4009	3/22/15	3/12/17	Scaffold	SC	SAMEA1019026	GCA_001393495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/495/GCA_001393495.1_6540_8_4	-	Bir 289
Escherichia coli	562	PRJNA362211	362211	Proteobacteria	Gammaproteobacteria	5.04759	50.8	-	MTKF01	341	5299	4913	2/1/17	2/26/17	Contig	University of Sao Paulo	SAMN06236403	GCA_001982505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/505/GCA_001982505.1_ASM198250v1	-	CF1-2
Salmonella enterica subsp. enterica serovar Javiana	363569	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.63642	52.1	-	MXQN01	35	4733	4480	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368814	GCA_002059385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/385/GCA_002059385.1_ASM205938v1	-	BCW_4002
Staphylococcus aureus subsp. aureus 21311	904761	PRJNA53675	53675	Terrabacteria group	Firmicutes	2.75217	32.7	-	JHPX01	59	2888	2683	4/11/14	3/3/17	Contig	J. Craig Venter Institute	SAMN00117462	GCA_000626975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/975/GCA_000626975.1_gsa21311v01	-	21311
Staphylococcus aureus subsp. aureus 21338	904770	PRJNA53693	53693	Terrabacteria group	Firmicutes	2.79294	32.7	-	JHQA01	32	2946	2753	4/11/14	3/3/17	Contig	J. Craig Venter Institute	SAMN00116876	GCA_000626995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/995/GCA_000626995.1_gsa21338v01	-	21338
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70201	52.2	-	MXQM01	90	4783	4544	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03357945	GCA_002059395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/395/GCA_002059395.1_ASM205939v1	-	BCW_4003
Escherichia coli	562	PRJNA362194	362194	Proteobacteria	Gammaproteobacteria	5.22356	50.3	-	MTKH01	391	5466	5103	2/1/17	2/26/17	Contig	University of Sao Paulo	SAMN06236581	GCA_001982555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/555/GCA_001982555.1_ASM198255v1	-	ICBEC13AM
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29695	65.3	-	CNFN01	200	4301	4038	3/23/15	3/12/17	Scaffold	SC	SAMEA1019028	GCA_001393515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/515/GCA_001393515.1_6540_3_15	-	Bir 183
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.06063	39.5	-	CLGM01	64	2281	2048	3/21/15	3/4/17	Scaffold	SC	SAMEA1026018	GCA_001159345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/345/GCA_001159345.1_6925_4_14	-	SMRU2150
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10373	39.6	-	CLTA01	69	2344	2100	3/21/15	3/4/17	Scaffold	SC	SAMEA1029011	GCA_001159445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/445/GCA_001159445.1_6972_4_2	-	19F
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28668	65.4	-	CNFA01	210	4308	4017	3/22/15	3/12/17	Scaffold	SC	SAMEA1019031	GCA_001393535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/535/GCA_001393535.1_6540_2_2	-	Bir 144
Escherichia coli	562	PRJNA361484	361484	Proteobacteria	Gammaproteobacteria	4.97234	50.5	-	MTPS01	666	5362	4822	2/1/17	2/26/17	Contig	University of Sao Paulo	SAMN06244220	GCA_001982585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/585/GCA_001982585.1_ASM198258v1	-	ICBEcBL-II-13
Salmonella enterica subsp. enterica serovar Berta	28142	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89566	52.1	-	MXQT01	675	5316	4666	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368811	GCA_002059435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/435/GCA_002059435.1_ASM205943v1	-	BCW_3996
Staphylococcus aureus subsp. aureus 21314	904762	PRJNA53677	53677	Terrabacteria group	Firmicutes	2.69138	32.8	-	JHPY01	25	2765	2598	4/11/14	3/3/17	Contig	J. Craig Venter Institute	SAMN00116867	GCA_000627015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/015/GCA_000627015.1_gsa21314v01	-	21314
Staphylococcus aureus subsp. aureus 21337	904769	PRJNA53691	53691	Terrabacteria group	Firmicutes	2.76674	32.7	-	JHPZ01	73	2867	2641	4/11/14	3/3/17	Contig	J. Craig Venter Institute	SAMN00116891	GCA_000627035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/627/035/GCA_000627035.1_gsa21337v01	-	21337
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.62617	52.2	-	MXQQ01	53	4659	4450	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03357943	GCA_002059445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/445/GCA_002059445.1_ASM205944v1	-	BCW_3999
Escherichia coli	562	PRJNA369398	369398	Proteobacteria	Gammaproteobacteria	5.02208	50.6	-	MUIQ01	96	5251	4837	2/5/17	2/26/17	Contig	University of Sao Paulo	SAMN06285143	GCA_001984845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/845/GCA_001984845.1_ASM198484v1	-	CF341
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.3089	65.4	-	CHBB01	178	4317	4063	4/21/15	3/12/17	Scaffold	SC	SAMEA1019032	GCA_001393555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/555/GCA_001393555.1_6570_5_10	-	Bir 318
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08504	39.7	-	CRQC01	77	2307	2090	3/23/15	3/11/17	Scaffold	SC	SAMEA1024958	GCA_001159485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/485/GCA_001159485.1_6775_2_2	-	SMRU842
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10029	39.6	-	CRTG01	57	2322	2078	3/23/15	3/10/17	Scaffold	SC	SAMEA1025367	GCA_001159645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/645/GCA_001159645.1_6805_4_14	-	SMRU1670
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31853	65.4	-	CNGB01	157	4296	4028	3/23/15	3/12/17	Scaffold	SC	SAMEA1019033	GCA_001393575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/575/GCA_001393575.1_6540_3_6	-	Bir 174
Escherichia coli	562	PRJNA369389	369389	Proteobacteria	Gammaproteobacteria	4.95068	50.7	-	MUIP01	137	5130	4783	2/5/17	2/26/17	Contig	University of Sao Paulo	SAMN06285083	GCA_001984855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/855/GCA_001984855.1_ASM198485v1	-	CF111
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.85806	52	-	MXQR01	65	4965	4701	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03357942	GCA_002059455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/455/GCA_002059455.1_ASM205945v1	-	BCW_3998
Staphylococcus aureus subsp. aureus	46170	PRJNA238401	238401	Terrabacteria group	Firmicutes	2.94896	32.7	-	JFAY01	301	3222	2937	4/23/14	3/3/17	Contig	Research Institute of childrens infections	SAMN02644450	GCA_000647695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/695/GCA_000647695.1_SAU05181.0	-	SA0518
Staphylococcus aureus subsp. aureus	46170	PRJNA238407	238407	Terrabacteria group	Firmicutes	2.90338	32.8	-	JFAU01	144	3122	2947	4/23/14	3/3/17	Contig	Research Institute of childrens infections	SAMN02644477	GCA_000647715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/715/GCA_000647715.1_Sau052117641	-	SA0521
Salmonella enterica subsp. enterica serovar Braenderup	149391	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.62753	52.3	-	MXQS01	147	4729	4444	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368812	GCA_002059465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/465/GCA_002059465.1_ASM205946v1	-	BCW_3997
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.1375	50.6	-	MOYT01	89	5368	5045	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567349	GCA_002001525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/525/GCA_002001525.1_ASM200152v1	-	11.1-R1
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29626	65.3	-	CNHO01	193	4324	4006	3/23/15	3/12/17	Scaffold	SC	SAMEA1019034	GCA_001393595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/595/GCA_001393595.1_6540_6_24	-	Bir 261
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.21403	39.5	-	CLYL01	75	2476	2231	3/21/15	3/11/17	Scaffold	SC	SAMEA1029080	GCA_001159725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/725/GCA_001159725.1_6983_7_51	-	SMRU2355
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.19013	39.5	-	CLRX01	61	2437	2185	3/21/15	3/11/17	Scaffold	SC	SAMEA1028950	GCA_001159765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/765/GCA_001159765.1_6972_3_22	-	SMRU2590
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32351	65.5	-	CNGD01	147	4279	4027	3/23/15	3/12/17	Scaffold	SC	SAMEA1019036	GCA_001393615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/615/GCA_001393615.1_6540_3_7	-	Bir 175
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.24688	50.6	-	MDZI01	243	5596	5232	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567362	GCA_002001535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/535/GCA_002001535.1_ASM200153v1	-	18.1-R1
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.57553	52.3	-	MXQU01	55	4597	4382	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368810	GCA_002059515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/515/GCA_002059515.1_ASM205951v1	-	BCW_3995
Staphylococcus aureus subsp. aureus	46170	PRJNA238409	238409	Terrabacteria group	Firmicutes	2.83958	32.8	-	JFAR01	317	3083	2787	4/23/14	3/3/17	Contig	Research Institute of childrens infections	SAMN02644479	GCA_000647735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/735/GCA_000647735.1_Sau05191.0	-	SA0519
Staphylococcus aureus subsp. aureus 21205	904734	PRJNA53621	53621	Terrabacteria group	Firmicutes	2.76539	32.6	-	JHUH01	59	2901	2759	4/29/14	3/3/17	Contig	J. Craig Venter Institute	SAMN00117457	GCA_000649105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/105/GCA_000649105.1_gsa21205v01	-	21205
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.73306	52.1	-	MXQX01	49	4819	4573	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368809	GCA_002059525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/525/GCA_002059525.1_ASM205952v1	-	BCW_3992
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.08718	50.6	-	MOYP01	152	5357	4969	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567352	GCA_002001545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/545/GCA_002001545.1_ASM200154v1	-	1.9-R6
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.24427	65.4	-	CNHN01	173	4266	3998	3/22/15	3/12/17	Scaffold	SC	SAMEA1019037	GCA_001393635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/635/GCA_001393635.1_6540_6_23	-	Bir 260
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.18989	39.7	-	CPUA01	199	2400	2161	3/23/15	3/11/17	Scaffold	SC	SAMEA1020587	GCA_001159805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/805/GCA_001159805.1_6569_4_6	-	PT1430
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.13494	39.5	-	CMSL01	53	2392	2148	3/23/15	3/10/17	Scaffold	SC	SAMEA2061960	GCA_001159825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/825/GCA_001159825.1_9803_8_70	-	13
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30775	65.4	-	CNLR01	170	4314	4043	3/23/15	3/12/17	Scaffold	SC	SAMEA1019043	GCA_001393655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/655/GCA_001393655.1_6570_8_3	-	Bir 384
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.21373	50.6	-	MOZD01	176	5464	5070	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567351	GCA_002001585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/585/GCA_002001585.1_ASM200158v1	-	19.1-R3
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.8283	52.1	-	MXQY01	78	4948	4724	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368807	GCA_002059555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/555/GCA_002059555.1_ASM205955v1	-	BCW_3990
Staphylococcus aureus HST-066	1323659	PRJNA215354	215354	Terrabacteria group	Firmicutes	2.77932	32.7	-	AVPA01	29	2924	2739	5/5/14	3/3/17	Contig	Lebanese American University	SAMN02744535	GCA_000681475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/681/475/GCA_000681475.1_Draft_HST-066_Genome	-	HST-066
Staphylococcus aureus ZTA11/03130-3ST	1413578	PRJNA226533	226533	Terrabacteria group	Firmicutes	2.91789	32.9	-	JIFC01	53	3088	2888	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391405	GCA_000682795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/795/GCA_000682795.1_Stap_aure_ZTA11_03130-3ST_V1	-	ZTA11/03130-3ST
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89729	52.2	-	MXQZ01	70	5027	4795	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368806	GCA_002059565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/565/GCA_002059565.1_ASM205956v1	-	BCW_3989
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.05088	50.5	-	MOZC01	81	5256	4947	2/16/17	2/26/17	Contig	The University of Sydney	SAMN05567343	GCA_002001595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/595/GCA_002001595.1_ASM200159v1	-	3.3-R2
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30394	65.4	-	CNHX01	193	4315	4044	3/23/15	3/12/17	Scaffold	SC	SAMEA1019047	GCA_001393675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/675/GCA_001393675.1_6540_7_1	-	Bir 262
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.05725	39.8	-	CPUL01	314	2232	2033	3/23/15	3/10/17	Scaffold	SC	SAMEA682599	GCA_001159885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/885/GCA_001159885.1_5381_3_1	-	09B06093
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.2154	39.6	-	CPSH01	94	2462	2202	3/23/15	3/11/17	Scaffold	SC	SAMEA1408268	GCA_001159925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/925/GCA_001159925.1_7444_8_34	-	9906+15160
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30792	65.4	-	CNFZ01	182	4318	4031	3/23/15	3/12/17	Scaffold	SC	SAMEA1019048	GCA_001393695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/695/GCA_001393695.1_6540_3_3	-	Bir 171
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.18483	50.6	-	MOZQ01	216	5510	5124	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567338	GCA_002001625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/625/GCA_002001625.1_ASM200162v1	-	19.1-R1a
Salmonella enterica subsp. enterica serovar Anatum	58712	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69533	52.1	-	MXQK01	97	4780	4522	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368816	GCA_002059595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/595/GCA_002059595.1_ASM205959v1	-	BCW_4005
Staphylococcus aureus ZTA09/03739-9HSA	1413583	PRJNA226538	226538	Terrabacteria group	Firmicutes	2.72844	32.8	-	JIFJ01	57	2838	2649	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391410	GCA_000682815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/815/GCA_000682815.1_Stap_aure_ZTA09_03739-9HSA_V1	-	ZTA09/03739-9HSA
Staphylococcus aureus ZTA09/03576-9HST	1413575	PRJNA226530	226530	Terrabacteria group	Firmicutes	2.84518	32.9	-	JIFL01	51	3002	2808	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391402	GCA_000682835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/835/GCA_000682835.1_Stap_aure_ZTA09_03576-9HST_V1	-	ZTA09/03576-9HST
Salmonella enterica subsp. enterica serovar Litchfield	486998	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70192	52.2	-	MXQP01	100	4799	4541	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368813	GCA_002059605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/605/GCA_002059605.1_ASM205960v1	-	BCW_4000
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.1375	50.7	-	MOZS01	257	5412	5015	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567330	GCA_002001635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/635/GCA_002001635.1_ASM200163v1	-	1.4-R4
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29871	65.4	-	CNEX01	156	4320	4041	3/23/15	3/12/17	Scaffold	SC	SAMEA1019049	GCA_001393715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/715/GCA_001393715.1_6540_2_12	-	Bir 154
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1406	39.6	-	CKVQ01	68	2379	2127	3/21/15	3/14/17	Scaffold	SC	SAMEA1025704	GCA_001159965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/965/GCA_001159965.1_6823_4_21	-	SMRU1941
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08679	39.5	-	CLSZ01	54	2291	2058	3/21/15	3/11/17	Scaffold	SC	SAMEA1028775	GCA_001160025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/025/GCA_001160025.1_6972_4_24	-	SMRU2616
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32002	65.4	-	CNHD01	181	4315	4044	3/23/15	3/12/17	Scaffold	SC	SAMEA1019050	GCA_001393735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/735/GCA_001393735.1_6540_6_1	-	Bir 235
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.20548	50.6	-	MOZT01	132	5519	5167	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567347	GCA_002001665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/665/GCA_002001665.1_ASM200166v1	-	22.1-R1
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69612	52.2	-	MXQW01	69	4748	4531	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03357940	GCA_002059635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/635/GCA_002059635.1_ASM205963v1	-	BCW_3993
Staphylococcus aureus VET1918S	1422806	PRJNA228899	228899	Terrabacteria group	Firmicutes	2.80312	32.9	-	JIFS01	43	2939	2742	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404389	GCA_000682855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/855/GCA_000682855.1_Stap_aure_VET1918S_V1	-	VET1918S
Staphylococcus aureus VET1915R	1422751	PRJNA228844	228844	Terrabacteria group	Firmicutes	2.7724	32.8	-	JIFU01	29	2891	2698	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404334	GCA_000682875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/875/GCA_000682875.1_Stap_aure_VET1915R_V1	-	VET1915R
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72692	52.2	-	MXQV01	53	4823	4593	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03357941	GCA_002059645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/645/GCA_002059645.1_ASM205964v1	-	BCW_3994
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.31248	50.5	-	MOZZ01	196	5647	5242	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567340	GCA_002001685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/685/GCA_002001685.1_ASM200168v1	-	1.10-R8
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30036	65.4	-	CNGY01	186	4312	4050	3/22/15	3/12/17	Scaffold	SC	SAMEA1019052	GCA_001393755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/755/GCA_001393755.1_6540_5_7	-	Bir 217
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09431	39.6	-	CRSO01	50	2274	2025	3/22/15	3/11/17	Scaffold	SC	SAMEA1025633	GCA_001160085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/085/GCA_001160085.1_6805_3_12	-	SMRU1452
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10414	39.5	-	CKDQ01	127	2312	2059	3/21/15	3/11/17	Scaffold	SC	SAMEA1024038	GCA_001160105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/105/GCA_001160105.1_6630_1_17	-	19A
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.26834	65.4	-	CNLJ01	167	4288	4021	3/23/15	3/12/17	Scaffold	SC	SAMEA1019053	GCA_001393775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/775/GCA_001393775.1_6570_8_15	-	Bir 396
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.4656	50.6	-	MPAA01	338	5849	5409	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567357	GCA_002001705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/705/GCA_002001705.1_ASM200170v1	-	3-R1
Salmonella enterica subsp. enterica serovar Javiana	363569	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.6008	52.2	-	MXRA01	110	4711	4436	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368805	GCA_002059665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/665/GCA_002059665.1_ASM205966v1	-	BCW_3988
Staphylococcus aureus VET1910R	1422746	PRJNA228839	228839	Terrabacteria group	Firmicutes	2.8308	32.8	-	JIFZ01	45	2966	2777	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404329	GCA_000682895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/895/GCA_000682895.1_Stap_aure_VET1910R_V1	-	VET1910R
Staphylococcus aureus VET1907R	1422743	PRJNA228836	228836	Terrabacteria group	Firmicutes	2.75782	32.8	-	JIGC01	34	2873	2684	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404326	GCA_000682915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/915/GCA_000682915.1_Stap_aure_VET1907R_V1	-	VET1907R
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.81306	52.1	-	MXRH01	86	4952	4683	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368798	GCA_002059695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/695/GCA_002059695.1_ASM205969v1	-	BCW_3981
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	4.98649	50.6	-	MPAD01	128	5231	4883	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567328	GCA_002001715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/715/GCA_002001715.1_ASM200171v1	-	3.6-R5
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32539	65.4	-	CNHJ01	169	4316	4032	3/23/15	3/12/17	Scaffold	SC	SAMEA1019054	GCA_001393795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/795/GCA_001393795.1_6540_6_2	-	Bir 236
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11108	39.6	-	CREV01	76	2338	2091	3/22/15	3/11/17	Scaffold	SC	SAMEA1025082	GCA_001160245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/245/GCA_001160245.1_6731_6_17	-	SMRU1121
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.96416	39.7	-	CQQL01	51	2167	1953	3/22/15	3/11/17	Scaffold	SC	SAMEA970211	GCA_001160305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/305/GCA_001160305.1_5159_5_6	-	BHN607
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.3152	65.3	-	CNHC01	166	4308	4028	3/23/15	3/12/17	Scaffold	SC	SAMEA1019055	GCA_001393815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/815/GCA_001393815.1_6540_5_8	-	Bir 218
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.24404	50.5	-	MPAE01	188	5549	5191	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567346	GCA_002001745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/745/GCA_002001745.1_ASM200174v1	-	14.2-R2
Salmonella enterica subsp. enterica serovar Montevideo	115981	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.64708	52.3	-	MXRJ01	370	4869	4430	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368796	GCA_002059705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/705/GCA_002059705.1_ASM205970v1	-	BCW_3979
Staphylococcus aureus VET1898R	1422737	PRJNA228830	228830	Terrabacteria group	Firmicutes	2.79351	32.9	-	JIGI01	49	2921	2727	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404320	GCA_000682935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/935/GCA_000682935.1_Stap_aure_VET1898R_V1	-	VET1898R
Staphylococcus aureus VET1896R	1422735	PRJNA228828	228828	Terrabacteria group	Firmicutes	2.75656	32.8	-	JIGK01	37	2846	2659	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404318	GCA_000682955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/955/GCA_000682955.1_Stap_aure_VET1896R_V1	-	VET1896R
Salmonella enterica subsp. enterica serovar Javiana	363569	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.6793	52.1	-	MXRK01	44	4782	4530	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368795	GCA_002059715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/715/GCA_002059715.1_ASM205971v1	-	BCW_3978
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.11196	50.7	-	MPAG01	257	5458	4987	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567326	GCA_002001765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/765/GCA_002001765.1_ASM200176v1	-	2.2-R2
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30596	65.4	-	CNJU01	169	4316	4024	3/23/15	3/12/17	Scaffold	SC	SAMEA1019058	GCA_001393855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/855/GCA_001393855.1_6570_5_6	-	Bir 314
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1173	39.7	-	CLHK01	73	2354	2135	3/21/15	3/11/17	Scaffold	SC	SAMEA1025865	GCA_001160325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/325/GCA_001160325.1_6925_5_13	-	SMRU2173
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.22275	39.5	-	CPUV01	93	2467	2221	3/23/15	3/11/17	Scaffold	SC	SAMEA1408210	GCA_001160425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/425/GCA_001160425.1_7444_8_64	-	0209+24059
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29849	65.4	-	CNHY01	168	4303	4054	3/22/15	3/12/17	Scaffold	SC	SAMEA1019062	GCA_001393875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/875/GCA_001393875.1_6540_7_15	-	Bir 276
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.25679	50.7	-	MPAH01	167	5561	5205	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567363	GCA_002001785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/785/GCA_002001785.1_ASM200178v1	-	4-R2
Salmonella enterica subsp. enterica serovar Oranienburg	28147	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.77311	52	-	MXRL01	64	4861	4590	3/22/17	4/10/17	Contig	University of California at Davis	SAMN02368794	GCA_002059755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/755/GCA_002059755.1_ASM205975v1	-	BCW_3977
Staphylococcus aureus VET1876R	1422726	PRJNA228819	228819	Terrabacteria group	Firmicutes	2.80687	32.8	-	JIGT01	63	2933	2734	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404309	GCA_000682975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/975/GCA_000682975.1_Stap_aure_VET1876R_V1	-	VET1876R
Staphylococcus aureus VET1869R	1422721	PRJNA228814	228814	Terrabacteria group	Firmicutes	2.80865	32.9	-	JIGY01	70	2951	2740	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404304	GCA_000682995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/682/995/GCA_000682995.1_Stap_aure_VET1869R_V1	-	VET1869R
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.65419	52.3	-	MXRN01	151	4767	4482	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03357939	GCA_002059765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/765/GCA_002059765.1_ASM205976v1	-	BCW_3975
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.19369	50.6	-	MOYR01	218	5514	5124	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567339	GCA_002001805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/805/GCA_002001805.1_ASM200180v1	-	19.1-R1
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.294	65.4	-	CNEW01	175	4310	4023	3/22/15	3/12/17	Scaffold	SC	SAMEA1019064	GCA_001393895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/895/GCA_001393895.1_6540_2_13	-	Bir 155
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.05701	39.7	-	CLGC01	61	2258	2040	3/21/15	3/4/17	Scaffold	SC	SAMEA1026161	GCA_001160465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/465/GCA_001160465.1_6925_3_4	-	SMRU2116
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12251	39.7	-	CMEW01	66	2365	2160	3/21/15	3/4/17	Scaffold	SC	SAMEA1028861	GCA_001160545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/545/GCA_001160545.1_7011_5_23	-	SMRU2807
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.2767	65.4	-	CNIB01	187	4285	4031	3/22/15	3/12/17	Scaffold	SC	SAMEA1019066	GCA_001393935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/935/GCA_001393935.1_6540_7_2	-	Bir 263
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.077	50.4	-	MOYU01	89	5110	4831	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567371	GCA_002001825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/825/GCA_002001825.1_ASM200182v1	-	24.1-R1
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.60306	52.3	-	MXRO01	96	4648	4403	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368792	GCA_002059795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/795/GCA_002059795.1_ASM205979v1	-	BCW_3974
Staphylococcus aureus VET1858R	1422713	PRJNA228806	228806	Terrabacteria group	Firmicutes	2.82061	32.9	-	JIHG01	84	2901	2730	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404296	GCA_000683015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/015/GCA_000683015.1_Stap_aure_VET1858R_V1	-	VET1858R
Staphylococcus aureus VET1842R	1422699	PRJNA228792	228792	Terrabacteria group	Firmicutes	2.75807	32.8	-	JIHU01	46	2866	2676	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404282	GCA_000683035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/035/GCA_000683035.1_Stap_aure_VET1842R_V1	-	VET1842R
Salmonella enterica subsp. enterica serovar Braenderup	149391	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66163	52.3	-	MXRQ01	67	4718	4500	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368790	GCA_002059815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/815/GCA_002059815.1_ASM205981v1	-	BCW_3972
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	4.81655	50.6	-	MOYV01	132	4971	4634	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567372	GCA_002001845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/845/GCA_002001845.1_ASM200184v1	-	24.1-R2
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.3227	65.4	-	CNIE01	180	4314	4020	3/22/15	3/12/17	Scaffold	SC	SAMEA1019067	GCA_001393955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/955/GCA_001393955.1_6540_7_17	-	Bir 278
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.17148	39.5	-	CMCA01	91	2411	2181	3/21/15	3/4/17	Scaffold	SC	SAMEA1029228	GCA_001160565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/565/GCA_001160565.1_7004_7_72	-	SMRU2904
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.06622	39.6	-	CLXC01	81	2260	2049	3/21/15	3/4/17	Scaffold	SC	SAMEA1028752	GCA_001160605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/605/GCA_001160605.1_6983_5_3	-	SMRU2307
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29914	65.4	-	CNJW01	180	4320	4029	3/23/15	3/12/17	Scaffold	SC	SAMEA1019068	GCA_001393975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/975/GCA_001393975.1_6570_5_8	-	Bir 316
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.24015	50.7	-	MOYY01	162	5520	5173	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567365	GCA_002001855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/855/GCA_002001855.1_ASM200185v1	-	4.4-R2b
Salmonella enterica subsp. enterica serovar Javiana	363569	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.54531	52.2	-	MXRP01	41	4614	4372	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368791	GCA_002059825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/825/GCA_002059825.1_ASM205982v1	-	BCW_3973
Staphylococcus aureus VET1833R	1422694	PRJNA228787	228787	Terrabacteria group	Firmicutes	2.85576	32.8	-	JIHZ01	53	3028	2823	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404277	GCA_000683055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/055/GCA_000683055.1_Stap_aure_VET1833R_V1	-	VET1833R
Staphylococcus aureus VET1515S	1422793	PRJNA228886	228886	Terrabacteria group	Firmicutes	2.78368	32.9	-	JIIN01	43	2874	2693	4/17/14	3/4/17	Contig	Broad Institute	SAMN02404376	GCA_000683075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/075/GCA_000683075.1_Stap_aure_VET1515S_V1	-	VET1515S
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.97039	52.1	-	MXRT01	96	5139	4869	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368787	GCA_002059855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/855/GCA_002059855.1_ASM205985v1	-	BCW_3969
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.00016	50.7	-	MOYW01	214	5277	4858	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567336	GCA_002001885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/885/GCA_002001885.1_ASM200188v1	-	24-R3
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29037	65.4	-	CNLF01	173	4311	4037	3/23/15	3/12/17	Scaffold	SC	SAMEA1019071	GCA_001393995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/995/GCA_001393995.1_6570_8_14	-	Bir 395
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.205	39.4	-	CMFQ01	107	2416	2183	3/21/15	3/4/17	Scaffold	SC	SAMEA1028779	GCA_001160725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/725/GCA_001160725.1_7011_6_21	-	SMRU2829
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.04203	39.7	-	CLUA01	66	2246	2034	3/21/15	3/4/17	Scaffold	SC	SAMEA1025915	GCA_001160765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/765/GCA_001160765.1_6983_2_10	-	SMRU2218
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.2792	65.4	-	CNFB01	169	4297	4034	3/23/15	3/12/17	Scaffold	SC	SAMEA1019075	GCA_001394015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/015/GCA_001394015.1_6540_2_14	-	Bir 156
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.16969	50.7	-	MOYZ01	260	5463	5061	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567325	GCA_002001905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/905/GCA_002001905.1_ASM200190v1	-	1-R1
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.09534	51.9	-	MXRU01	242	5272	4904	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368786	GCA_002059875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/875/GCA_002059875.1_ASM205987v1	-	BCW_3967
Staphylococcus aureus VET1422S	1422788	PRJNA228881	228881	Terrabacteria group	Firmicutes	2.80017	32.9	-	JIIS01	43	2917	2735	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404371	GCA_000683095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/095/GCA_000683095.1_Stap_aure_VET1422S_V1	-	VET1422S
Staphylococcus aureus VET1419S	1422787	PRJNA228880	228880	Terrabacteria group	Firmicutes	2.74782	32.9	-	JIIT01	30	2846	2668	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404370	GCA_000683115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/115/GCA_000683115.1_Stap_aure_VET1419S_V1	-	VET1419S
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.08036	51.9	-	MXRV01	131	5194	4902	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368785	GCA_002059885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/885/GCA_002059885.1_ASM205988v1	-	BCW_3966
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.23554	50.7	-	MOZA01	165	5517	5185	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567367	GCA_002001915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/915/GCA_002001915.1_ASM200191v1	-	14.1-R1
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30302	65.4	-	CNJV01	166	4310	4040	3/22/15	3/12/17	Scaffold	SC	SAMEA1019078	GCA_001394055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/055/GCA_001394055.1_6570_5_7	-	Bir 315
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.17582	39.5	-	CKGP01	81	2459	2200	3/21/15	3/4/17	Scaffold	SC	SAMEA1023895	GCA_001160805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/805/GCA_001160805.1_6631_1_1	-	46
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.9906	39.8	-	CQRG01	47	2202	1989	3/22/15	3/4/17	Scaffold	SC	SAMEA970203	GCA_001160925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/925/GCA_001160925.1_5159_8_2	-	BHN643
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31453	65.4	-	CNNF01	182	4294	4069	3/23/15	3/12/17	Scaffold	SC	SAMEA1019082	GCA_001394075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/075/GCA_001394075.1_7054_2_84	-	Bir 483
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.21853	50.6	-	MOZN01	139	5433	5104	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567350	GCA_002001945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/945/GCA_002001945.1_ASM200194v1	-	11.3-R3
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.63793	52.3	-	MXRX01	70	4682	4479	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368783	GCA_002059915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/915/GCA_002059915.1_ASM205991v1	-	BCW_3964
Staphylococcus aureus VET1373S	1422785	PRJNA228878	228878	Terrabacteria group	Firmicutes	2.75911	32.7	-	JIIV01	56	2914	2724	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404368	GCA_000683135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/135/GCA_000683135.1_Stap_aure_VET1373S_V1	-	VET1373S
Staphylococcus aureus VET1368S	1422784	PRJNA228877	228877	Terrabacteria group	Firmicutes	2.75855	32.7	-	JIIW01	52	2900	2722	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404367	GCA_000683155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/155/GCA_000683155.1_Stap_aure_VET1368S_V1	-	VET1368S
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.04527	52.1	-	MXRY01	131	5177	4883	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368782	GCA_002059935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/935/GCA_002059935.1_ASM205993v1	-	BCW_3963
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.15095	50.5	-	MOZB01	139	5285	4949	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567370	GCA_002001965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/965/GCA_002001965.1_ASM200196v1	-	13.1-R1
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30241	65.4	-	CNJG01	178	4337	4057	3/22/15	3/12/17	Scaffold	SC	SAMEA1019085	GCA_001394095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/095/GCA_001394095.1_6570_5_12	-	Bir 320
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.17489	39.6	-	CMFT01	157	2407	2169	3/21/15	3/5/17	Scaffold	SC	SAMEA1028662	GCA_001160965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/965/GCA_001160965.1_7011_6_24	-	SMRU2832
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.12253	39.6	-	CKIF01	82	2300	2028	3/21/15	3/11/17	Scaffold	SC	SAMEA1024168	GCA_001161045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/045/GCA_001161045.1_6631_3_22	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32236	65.4	-	CNMX01	182	4322	4061	3/22/15	3/12/17	Scaffold	SC	SAMEA1019092	GCA_001394135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/135/GCA_001394135.1_7054_2_60	-	Bir 459
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.46607	50.6	-	MOZG01	337	5852	5416	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567358	GCA_002001975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/975/GCA_002001975.1_ASM200197v1	-	4-R1
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.32528	52.1	-	MXRZ01	185	5569	5214	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368781	GCA_002059945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/945/GCA_002059945.1_ASM205994v1	-	BCW_3962
Staphylococcus aureus VET1103S	1422779	PRJNA228872	228872	Terrabacteria group	Firmicutes	2.75091	32.8	-	JIJB01	29	2861	2683	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404362	GCA_000683175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/175/GCA_000683175.1_Stap_aure_VET1103S_V1	-	VET1103S
Staphylococcus aureus VET0798S	1422762	PRJNA228855	228855	Terrabacteria group	Firmicutes	2.71232	32.8	-	JIJR01	26	2794	2617	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404345	GCA_000683195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/195/GCA_000683195.1_Stap_aure_VET0798S_V1	-	VET0798S
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.67419	52.3	-	MXRF01	150	4791	4492	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368800	GCA_002059955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/955/GCA_002059955.1_ASM205995v1	-	BCW_3983
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.18431	50.6	-	MOZF01	214	5507	5122	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567337	GCA_002001995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/001/995/GCA_002001995.1_ASM200199v1	-	3.5-R3
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30852	65.4	-	CIKK01	169	4289	4010	4/21/15	3/12/17	Scaffold	SC	SAMEA1019093	GCA_001394155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/155/GCA_001394155.1_6540_7_22	-	Bir 283
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.11909	39.6	-	CMBG01	55	2349	2130	3/21/15	3/11/17	Scaffold	SC	SAMEA1029016	GCA_001161085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/085/GCA_001161085.1_7004_6_44	-	SMRU2852
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12352	39.5	-	CRFP01	71	2329	2111	3/23/15	3/11/17	Scaffold	SC	SAMEA1025666	GCA_001161105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/105/GCA_001161105.1_6736_4_21	-	SMRU1221
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.24944	65.4	-	CNEL01	156	4251	3944	3/22/15	3/12/17	Scaffold	SC	SAMEA1019094	GCA_001394175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/175/GCA_001394175.1_6540_1_21	-	Bir 139
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	4.63951	50.8	-	MOZI01	192	4847	4420	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567333	GCA_002002005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/005/GCA_002002005.1_ASM200200v1	-	1.2-R3
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.59906	52.2	-	MXSB01	50	4615	4407	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368779	GCA_002060015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/015/GCA_002060015.1_ASM206001v1	-	BCW_3960
Staphylococcus aureus VET0765S	1422759	PRJNA228852	228852	Terrabacteria group	Firmicutes	2.77001	32.9	-	JIJU01	39	2882	2706	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404342	GCA_000683215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/215/GCA_000683215.1_Stap_aure_VET0765S_V1	-	VET0765S
Staphylococcus aureus VET0612S	1422753	PRJNA228846	228846	Terrabacteria group	Firmicutes	2.72312	32.9	-	JIKA01	26	2828	2644	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404336	GCA_000683235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/235/GCA_000683235.1_Stap_aure_VET0612S_V1	-	VET0612S
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.54378	52.2	-	MXSD01	63	4610	4377	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03357938	GCA_002060025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/025/GCA_002060025.1_ASM206002v1	-	BCW_3958
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.27485	50.6	-	MOZL01	264	5644	5170	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567354	GCA_002002045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/045/GCA_002002045.1_ASM200204v1	-	2.3-R3
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32528	65.4	-	CNIH01	161	4301	4064	3/23/15	3/12/17	Scaffold	SC	SAMEA1019097	GCA_001394215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/215/GCA_001394215.1_6540_7_20	-	Bir 281
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.12819	39.5	-	CKLH01	102	2369	2096	3/21/15	3/11/17	Scaffold	SC	SAMEA1024134	GCA_001161165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/165/GCA_001161165.1_6641_6_11	-	46
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.15114	39.5	-	CQZL01	83	2421	2169	3/22/15	3/10/17	Scaffold	SC	SAMEA1024626	GCA_001161185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/185/GCA_001161185.1_6730_5_12	-	SMRU660
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31187	65.4	-	CNGH01	131	4295	4039	3/22/15	3/12/17	Scaffold	SC	SAMEA1019099	GCA_001394235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/235/GCA_001394235.1_6540_4_21	-	Bir 213
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.56092	50.4	-	MOZJ01	280	5800	5319	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567361	GCA_002002055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/055/GCA_002002055.1_ASM200205v1	-	11.4-R4
Salmonella enterica subsp. enterica serovar Anatum	58712	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66601	52.2	-	MXSG01	49	4733	4504	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368776	GCA_002060035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/035/GCA_002060035.1_ASM206003v1	-	BCW_3955
Staphylococcus aureus VET0489R	1422690	PRJNA228783	228783	Terrabacteria group	Firmicutes	2.8149	32.8	-	JIKD01	52	2954	2768	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404273	GCA_000683255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/255/GCA_000683255.1_Stap_aure_VET0489R_V1	-	VET0489R
Staphylococcus aureus VET0473R	1422684	PRJNA228777	228777	Terrabacteria group	Firmicutes	2.7924	32.8	-	JIKJ01	60	2904	2705	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404267	GCA_000683275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/275/GCA_000683275.1_Stap_aure_VET0473R_V1	-	VET0473R
Salmonella enterica subsp. enterica serovar Oranienburg	28147	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70985	52	-	MXSI01	479	5026	4503	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368771	GCA_002060075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/075/GCA_002060075.1_ASM206007v1	-	BCW_3947
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	4.99819	50.7	-	MOZP01	215	5274	4858	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567331	GCA_002002075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/075/GCA_002002075.1_ASM200207v1	-	15.1-R1
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33586	65.4	-	CNLB01	166	4331	4038	3/22/15	3/12/17	Scaffold	SC	SAMEA1019100	GCA_001394255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/255/GCA_001394255.1_6570_7_6	-	Bir 362
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21113	39.5	-	CPQI01	104	2450	2207	3/23/15	3/10/17	Scaffold	SC	SAMEA1408325	GCA_001161205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/205/GCA_001161205.1_7444_8_19	-	9708+26128
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.13994	39.5	-	CRVN01	72	2373	2120	3/23/15	3/11/17	Scaffold	SC	SAMEA1025765	GCA_001161285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/285/GCA_001161285.1_6805_7_15	-	SMRU1744
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29935	65.4	-	CNEN01	190	4308	4027	3/22/15	3/12/17	Scaffold	SC	SAMEA1019101	GCA_001394275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/275/GCA_001394275.1_6540_1_23	-	Bir 141
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.11898	50.6	-	MOZM01	209	5340	4974	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567360	GCA_002002105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/105/GCA_002002105.1_ASM200210v1	-	5.2-R2
Salmonella enterica subsp. enterica	59201	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.63921	52.2	-	MXSK01	73	4721	4474	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368770	GCA_002060085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/085/GCA_002060085.1_ASM206008v1	-	DUP-103
Staphylococcus aureus VET0472R	1422683	PRJNA228776	228776	Terrabacteria group	Firmicutes	2.78264	32.8	-	JIKK01	37	2899	2709	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404266	GCA_000683295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/295/GCA_000683295.1_Stap_aure_VET0472R_V1	-	VET0472R
Staphylococcus aureus VET0471R	1422682	PRJNA228775	228775	Terrabacteria group	Firmicutes	2.80265	32.8	-	JIKL01	55	2924	2729	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404265	GCA_000683315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/315/GCA_000683315.1_Stap_aure_VET0471R_V1	-	VET0471R
Salmonella enterica subsp. enterica serovar Anatum	58712	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.98051	52.1	-	MXSH01	177	5207	4873	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368775	GCA_002060115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/115/GCA_002060115.1_ASM206011v1	-	BCW_3954
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.1135	50.4	-	MOZV01	128	5342	4985	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567345	GCA_002002125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/125/GCA_002002125.1_ASM200212v1	-	13.1-R2a
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.35109	65.5	-	CNNC01	173	4327	4055	3/23/15	3/12/17	Scaffold	SC	SAMEA1019102	GCA_001394295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/295/GCA_001394295.1_7054_2_82	-	Bir 481
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.20928	39.5	-	CKEH01	146	2448	2166	3/21/15	3/10/17	Scaffold	SC	SAMEA1024151	GCA_001161345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/345/GCA_001161345.1_6630_2_12	-	6B
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.17513	39.6	-	CLAU01	41	2369	2138	3/21/15	3/10/17	Scaffold	SC	SAMEA1025482	GCA_001161405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/405/GCA_001161405.1_6841_7_16	-	SMRU1336
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33374	65.5	-	CNMW01	168	4307	4074	3/23/15	3/12/17	Scaffold	SC	SAMEA1019108	GCA_001394335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/335/GCA_001394335.1_7054_1_7	-	Bir 406
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.17219	50.4	-	MOZX01	173	5293	4908	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567368	GCA_002002145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/145/GCA_002002145.1_ASM200214v1	-	6.2-R1
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89499	52.2	-	MXSJ01	89	5021	4790	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03357936	GCA_002060125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/125/GCA_002060125.1_ASM206012v1	-	BCW_3946
Staphylococcus aureus VET0469R	1422680	PRJNA228773	228773	Terrabacteria group	Firmicutes	2.71308	32.8	-	JIKN01	32	2783	2605	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404263	GCA_000683335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/335/GCA_000683335.1_Stap_aure_VET0469R_V1	-	VET0469R
Staphylococcus aureus VET0467R	1422678	PRJNA228771	228771	Terrabacteria group	Firmicutes	2.78226	32.8	-	JIKP01	40	2901	2709	4/17/14	3/4/17	Contig	Broad Institute	SAMN02404261	GCA_000683355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/355/GCA_000683355.1_Stap_aure_VET0467R_V1	-	VET0467R
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70179	52.1	-	MXSP01	38	4808	4558	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368393	GCA_002060155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/155/GCA_002060155.1_ASM206015v1	-	BCW_3418
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.09949	50.4	-	MOYS01	130	5330	4970	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567344	GCA_002002165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/165/GCA_002002165.1_ASM200216v1	-	13.1-R2
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33615	65.4	-	CNIF01	162	4328	4032	3/23/15	3/12/17	Scaffold	SC	SAMEA1019113	GCA_001394375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/375/GCA_001394375.1_6540_7_19	-	Bir 280
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.1309	39.7	-	CMRK01	82	2380	2142	3/23/15	3/11/17	Scaffold	SC	SAMEA2061746	GCA_001161425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/425/GCA_001161425.1_9803_8_43	-	19F
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.15759	39.4	-	CLAG01	53	2385	2150	3/21/15	3/11/17	Scaffold	SC	SAMEA1025803	GCA_001161465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/465/GCA_001161465.1_6840_3_3	-	SMRU1803
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.25544	65.4	-	CNEJ01	157	4243	3936	3/23/15	3/12/17	Scaffold	SC	SAMEA1019118	GCA_001394395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/395/GCA_001394395.1_6540_1_19	-	Bir 136
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	4.93009	50.7	-	MOZU01	170	5173	4798	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567327	GCA_002002175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/175/GCA_002002175.1_ASM200217v1	-	3.6-R4
Salmonella enterica subsp. enterica serovar Javiana	363569	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.75331	52	-	MXSM01	60	4871	4612	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368399	GCA_002060175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/175/GCA_002060175.1_ASM206017v1	-	BCW_3424
Staphylococcus aureus VET0437R	1422659	PRJNA228752	228752	Terrabacteria group	Firmicutes	2.75459	32.8	-	JILI01	32	2844	2659	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404242	GCA_000683375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/375/GCA_000683375.1_Stap_aure_VET0437R_V1	-	VET0437R
Staphylococcus aureus VET0436R	1422658	PRJNA228751	228751	Terrabacteria group	Firmicutes	3.00382	32.9	-	JILJ01	153	3182	2924	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404241	GCA_000683395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/395/GCA_000683395.1_Stap_aure_VET0436R_V1	-	VET0436R
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.23719	52	-	MXSO01	117	5465	5160	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368394	GCA_002060195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/195/GCA_002060195.1_ASM206019v1	-	BCW_3419
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	4.52078	50.9	-	MOZW01	140	4739	4363	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567335	GCA_002002195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/195/GCA_002002195.1_ASM200219v1	-	14.2-R3
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.27918	65.3	-	CNLT01	252	4371	4036	3/22/15	3/12/17	Scaffold	SC	SAMEA1019119	GCA_001394415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/415/GCA_001394415.1_6570_8_24	-	Bir 405
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.03477	39.7	-	CRQB01	74	2231	2028	3/23/15	3/11/17	Scaffold	SC	SAMEA1024722	GCA_001161585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/585/GCA_001161585.1_6775_2_19	-	SMRU859
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.1188	39.6	-	CRKC01	64	2339	2115	3/23/15	3/10/17	Scaffold	SC	SAMEA1025123	GCA_001161605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/605/GCA_001161605.1_6753_3_20	-	SMRU1532
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31003	65.4	-	CNKX01	186	4327	4014	3/23/15	3/12/17	Scaffold	SC	SAMEA1019120	GCA_001394435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/435/GCA_001394435.1_6570_7_2	-	Bir 358
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	4.70291	50.7	-	MOYX01	45	4777	4521	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567353	GCA_002002225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/225/GCA_002002225.1_ASM200222v1	-	5.1-R1
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.91868	52	-	MXSU01	101	5062	4794	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368385	GCA_002060215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/215/GCA_002060215.1_ASM206021v1	-	BCW_3410
Staphylococcus aureus VET0426R	1422650	PRJNA228743	228743	Terrabacteria group	Firmicutes	2.74674	32.8	-	JILR01	38	2827	2640	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404233	GCA_000683415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/415/GCA_000683415.1_Stap_aure_VET0426R_V1	-	VET0426R
Staphylococcus aureus VET0424R	1422648	PRJNA228741	228741	Terrabacteria group	Firmicutes	2.83217	32.9	-	JILT01	49	2958	2766	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404231	GCA_000683435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/435/GCA_000683435.1_Stap_aure_VET0424R_V1	-	VET0424R
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.05259	52	-	MXSX01	1477	5758	4823	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368380	GCA_002060235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/235/GCA_002060235.1_ASM206023v1	-	NCTR-SF696
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	4.72366	50.6	-	MOZH01	214	4914	4538	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567334	GCA_002002235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/235/GCA_002002235.1_ASM200223v1	-	1.9-R7
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31709	65.4	-	CNGF01	166	4310	4055	3/23/15	3/12/17	Scaffold	SC	SAMEA1019121	GCA_001394455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/455/GCA_001394455.1_6540_4_19	-	Bir 211
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08549	39.6	-	CLYJ01	40	2290	2057	3/21/15	3/10/17	Scaffold	SC	SAMEA1029055	GCA_001161705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/705/GCA_001161705.1_6983_7_53	-	SMRU2357
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12329	39.5	-	CRFU01	70	2341	2116	3/23/15	3/11/17	Scaffold	SC	SAMEA1025366	GCA_001161725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/725/GCA_001161725.1_6736_5_10	-	SMRU1234
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29999	65.4	-	CNES01	186	4308	4032	3/23/15	3/12/17	Scaffold	SC	SAMEA1019123	GCA_001394475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/475/GCA_001394475.1_6540_1_6	-	Bir 123
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.20265	50.7	-	MOZK01	160	5465	5136	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567364	GCA_002002255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/255/GCA_002002255.1_ASM200225v1	-	4.3-R2a
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.11623	52	-	MXSZ01	804	5324	4895	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368378	GCA_002060275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/275/GCA_002060275.1_ASM206027v1	-	NCTR-SF606
Staphylococcus aureus VET0422R	1422646	PRJNA228739	228739	Terrabacteria group	Firmicutes	2.8293	32.9	-	JILV01	51	2946	2755	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404229	GCA_000683455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/455/GCA_000683455.1_Stap_aure_VET0422R_V1	-	VET0422R
Staphylococcus aureus VET0414R	1422641	PRJNA228734	228734	Terrabacteria group	Firmicutes	2.71985	32.9	-	JIMA01	37	2807	2617	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404224	GCA_000683475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/475/GCA_000683475.1_Stap_aure_VET0414R_V1	-	VET0414R
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.97661	52.1	-	MXTB01	115	5167	4884	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358937	GCA_002060285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/285/GCA_002060285.1_ASM206028v1	-	BCW_3400
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.24027	50.7	-	MOZR01	227	5572	5161	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567329	GCA_002002285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/285/GCA_002002285.1_ASM200228v1	-	21.1-R1
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.34085	65.5	-	CNLC01	150	4308	4047	3/22/15	3/12/17	Scaffold	SC	SAMEA1019126	GCA_001394495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/495/GCA_001394495.1_6570_7_4	-	Bir 360
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09349	39.5	-	CKWK01	53	2306	2080	3/21/15	3/11/17	Scaffold	SC	SAMEA1025961	GCA_001161745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/745/GCA_001161745.1_6823_5_17	-	SMRU1961
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.15731	39.4	-	CLKD01	67	2368	2126	3/21/15	3/11/17	Scaffold	SC	SAMEA1028954	GCA_001161845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/845/GCA_001161845.1_6925_8_6	-	SMRU2526
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.34083	65.4	-	CNJI01	193	4342	4017	3/23/15	3/12/17	Scaffold	SC	SAMEA1019128	GCA_001394515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/515/GCA_001394515.1_6570_5_13	-	Bir 321
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	4.96617	50.5	-	MOZY01	92	5075	4764	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567369	GCA_002002305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/305/GCA_002002305.1_ASM200230v1	-	9.1-R1
Salmonella enterica subsp. enterica serovar Copenhagen	486990	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.00602	52.2	-	MXTA01	100	5171	4917	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368377	GCA_002060305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/305/GCA_002060305.1_ASM206030v1	-	BCW_3401
Staphylococcus aureus VET0400R	1422631	PRJNA228724	228724	Terrabacteria group	Firmicutes	2.80504	32.9	-	JIMK01	61	2934	2731	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404214	GCA_000683495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/495/GCA_000683495.1_Stap_aure_VET0400R_V1	-	VET0400R
Staphylococcus aureus VET0368R	1422615	PRJNA228707	228707	Terrabacteria group	Firmicutes	2.80342	32.8	-	JINA01	61	2929	2732	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404198	GCA_000683515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/515/GCA_000683515.1_Stap_aure_VET0368R_V1	-	VET0368R
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.12917	52	-	MXTF01	156	5331	5008	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358935	GCA_002060335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/335/GCA_002060335.1_ASM206033v1	-	BCW_3391
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.24679	50.5	-	MPAB01	192	5553	5198	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567342	GCA_002002315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/315/GCA_002002315.1_ASM200231v1	-	3-S1R
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31644	65.4	-	CNJH01	182	4300	4020	3/22/15	3/12/17	Scaffold	SC	SAMEA1019131	GCA_001394535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/535/GCA_001394535.1_6570_5_14	-	Bir 322
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.07349	39.5	-	CLBO01	77	2291	2066	3/21/15	3/10/17	Scaffold	SC	SAMEA1025916	GCA_001161885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/885/GCA_001161885.1_6871_1_22	-	SMRU1798
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.17191	39.5	-	CLUB01	69	2417	2177	3/21/15	3/10/17	Scaffold	SC	SAMEA1028758	GCA_001161905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/905/GCA_001161905.1_6972_5_9	-	SMRU2625
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.58035	63.7	-	CNFP01	1193	4496	4153	3/23/15	3/12/17	Scaffold	SC	SAMEA1019134	GCA_001394555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/555/GCA_001394555.1_6540_3_13	-	Bir 181
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.2835	50.6	-	MPAC01	268	5647	5174	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567356	GCA_002002325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/325/GCA_002002325.1_ASM200232v1	-	2.3-R5
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.88619	52	-	MXTH01	622	5136	4589	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368366	GCA_002060365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/365/GCA_002060365.1_ASM206036v1	-	NCTR-SF152
Staphylococcus aureus VET0361R	1422610	PRJNA228701	228701	Terrabacteria group	Firmicutes	2.73246	32.8	-	JINE01	35	2794	2616	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404193	GCA_000683535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/535/GCA_000683535.1_Stap_aure_VET0361R_V1	-	VET0361R
Staphylococcus aureus VET0358R	1422607	PRJNA228698	228698	Terrabacteria group	Firmicutes	2.79855	32.8	-	JINH01	33	2905	2716	4/17/14	3/4/17	Contig	Broad Institute	SAMN02404190	GCA_000683555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/555/GCA_000683555.1_Stap_aure_VET0358R_V1	-	VET0358R
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69273	52.2	-	MXTI01	50	4770	4552	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358933	GCA_002060385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/385/GCA_002060385.1_ASM206038v1	-	BCW_3381
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.20952	50.5	-	MOZO01	127	5435	5073	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567341	GCA_002002465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/465/GCA_002002465.1_ASM200246v1	-	2.1-R1
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.25255	65.4	-	CNEM01	165	4246	3946	3/22/15	3/12/17	Scaffold	SC	SAMEA1019136	GCA_001394575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/575/GCA_001394575.1_6540_1_20	-	Bir 138
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.06793	39.6	-	CRAC01	124	2233	1996	3/23/15	3/11/17	Scaffold	SC	SAMEA1024546	GCA_001161945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/945/GCA_001161945.1_6730_6_19	-	SMRU691
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.23704	39.5	-	CKIR01	115	2475	2228	3/21/15	3/10/17	Scaffold	SC	SAMEA1023814	GCA_001161965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/965/GCA_001161965.1_6631_4_1	-	6A
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33783	65.4	-	CNNE01	167	4328	4082	3/23/15	3/12/17	Scaffold	SC	SAMEA1019137	GCA_001394595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/595/GCA_001394595.1_7054_2_83	-	Bir 482
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	4.81356	50.7	-	MQAE01	101	5016	4676	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567323	GCA_002002545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/545/GCA_002002545.1_ASM200254v1	-	24.16-R4
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.73263	52.2	-	MXTL01	173	4946	4530	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358931	GCA_002060415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/415/GCA_002060415.1_ASM206041v1	-	BCW_3373
Staphylococcus aureus VET0353R	1422604	PRJNA228695	228695	Terrabacteria group	Firmicutes	2.77592	32.8	-	JINK01	33	2879	2699	4/17/14	3/4/17	Contig	Broad Institute	SAMN02404187	GCA_000683575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/575/GCA_000683575.1_Stap_aure_VET0353R_V1	-	VET0353R
Staphylococcus aureus VET0343R	1422602	PRJNA228693	228693	Terrabacteria group	Firmicutes	2.75348	32.8	-	JINM01	36	2846	2656	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404185	GCA_000683595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/595/GCA_000683595.1_Stap_aure_VET0343R_V1	-	VET0343R
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89639	52.2	-	MXTK01	96	5053	4807	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358932	GCA_002060435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/435/GCA_002060435.1_ASM206043v1	-	BCW_3376
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.21107	50.7	-	MQAF01	198	5526	5161	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567366	GCA_002002585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/585/GCA_002002585.1_ASM200258v1	-	11.2-R2
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29726	65.4	-	CNEH01	205	4308	4024	3/22/15	3/12/17	Scaffold	SC	SAMEA1019139	GCA_001394615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/615/GCA_001394615.1_6540_1_17	-	Bir 134
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.19452	39.6	-	CRVC01	72	2390	2083	3/23/15	3/11/17	Scaffold	SC	SAMEA1025249	GCA_001161985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/985/GCA_001161985.1_6805_6_4	-	SMRU1708
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11048	39.7	-	CLGO01	70	2260	2011	3/21/15	3/4/17	Scaffold	SC	SAMEA1026059	GCA_001162005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/005/GCA_001162005.1_6925_4_17	-	SMRU2153
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29681	65.3	-	CNIV01	200	4323	4018	3/23/15	3/12/17	Scaffold	SC	SAMEA1019142	GCA_001394635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/635/GCA_001394635.1_6540_8_2	-	Bir 287
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	4.77174	50.6	-	MQAH01	449	5216	4596	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567322	GCA_002002595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/595/GCA_002002595.1_ASM200259v1	-	14.3-R4
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.78363	52.2	-	MXTO01	69	4891	4646	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358874	GCA_002060455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/455/GCA_002060455.1_ASM206045v1	-	BCW_3312
Staphylococcus aureus VET0342R	1422601	PRJNA228692	228692	Terrabacteria group	Firmicutes	2.76039	32.8	-	JINN01	39	2855	2664	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404184	GCA_000683615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/615/GCA_000683615.1_Stap_aure_VET0342R_V1	-	VET0342R
Staphylococcus aureus VET0332R	1422592	PRJNA228683	228683	Terrabacteria group	Firmicutes	2.76455	32.9	-	JINW01	32	2855	2675	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404175	GCA_000683635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/635/GCA_000683635.1_Stap_aure_VET0332R_V1	-	VET0332R
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.96834	52.1	-	MXTN01	57	5150	4821	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358930	GCA_002060465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/465/GCA_002060465.1_ASM206046v1	-	BCW_3370
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	4.51315	50.9	-	MQAG01	142	4657	4324	2/16/17	2/26/17	Contig	The University of Sydney	SAMN05567324	GCA_002002685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/685/GCA_002002685.1_ASM200268v1	-	24.20-R5
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32778	65.3	-	CNJK01	188	4358	4048	3/22/15	3/13/17	Scaffold	SC	SAMEA1019143	GCA_001394655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/655/GCA_001394655.1_6570_5_2	-	Bir 310
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12241	39.5	-	CRCU01	81	2317	2081	3/22/15	3/4/17	Scaffold	SC	SAMEA1024914	GCA_001162025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/025/GCA_001162025.1_6731_3_15	-	SMRU1047
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11044	39.6	-	CRQT01	56	2323	2076	3/23/15	3/4/17	Scaffold	SC	SAMEA1024726	GCA_001162045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/045/GCA_001162045.1_6791_6_2	-	SMRU626
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.2932	65.4	-	CIDP01	165	4293	4024	4/21/15	3/12/17	Scaffold	SC	SAMEA1019145	GCA_001394675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/675/GCA_001394675.1_6540_8_12	-	Bir 297
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.35893	50.6	-	MPAF01	349	5739	5203	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567355	GCA_002002775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/775/GCA_002002775.1_ASM200277v1	-	2.3-R4
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.84625	52.2	-	MXTR01	29	4950	4712	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368352	GCA_002060495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/495/GCA_002060495.1_ASM206049v1	-	BCW_3309
Staphylococcus aureus VET0319R	1422584	PRJNA228675	228675	Terrabacteria group	Firmicutes	2.76227	32.9	-	JIOE01	32	2863	2681	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404167	GCA_000683655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/655/GCA_000683655.1_Stap_aure_VET0319R_V1	-	VET0319R
Staphylococcus aureus VET0306R	1422573	PRJNA228664	228664	Terrabacteria group	Firmicutes	2.8667	32.8	-	JIOP01	45	3013	2819	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404156	GCA_000683675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/675/GCA_000683675.1_Stap_aure_VET0306R_V1	-	VET0306R
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.56618	52.2	-	MXTU01	47	4583	4331	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368348	GCA_002060515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/515/GCA_002060515.1_ASM206051v1	-	BCW_3305
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.19663	50.5	-	MOYQ01	152	5475	5108	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567348	GCA_002002805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/805/GCA_002002805.1_ASM200280v1	-	10.1-R1
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30556	65.4	-	CNJS01	172	4304	4046	3/22/15	3/12/17	Scaffold	SC	SAMEA1019146	GCA_001394695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/695/GCA_001394695.1_6570_5_3	-	Bir 311
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.06219	39.7	-	CRSE01	64	2259	2056	3/23/15	3/4/17	Scaffold	SC	SAMEA1025222	GCA_001162105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/105/GCA_001162105.1_6805_2_2	-	SMRU1418
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.13441	39.7	-	CLIF01	59	2377	2157	3/21/15	3/4/17	Scaffold	SC	SAMEA1026133	GCA_001162125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/125/GCA_001162125.1_6925_6_2	-	SMRU2186
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29178	65.5	-	CNMC01	163	4268	4039	3/23/15	3/12/17	Scaffold	SC	SAMEA1019150	GCA_001394715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/715/GCA_001394715.1_7054_1_18	-	Bir 417
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	4.64793	50.8	-	MOZE01	142	4837	4475	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567332	GCA_002002815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/815/GCA_002002815.1_ASM200281v1	-	1.2-R2
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7462	52.2	-	MXTP01	73	4867	4607	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358873	GCA_002060525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/525/GCA_002060525.1_ASM206052v1	-	BCW_3311
Staphylococcus aureus VET0301R	1422568	PRJNA228659	228659	Terrabacteria group	Firmicutes	2.78706	32.8	-	JIOU01	40	2875	2716	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404151	GCA_000683695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/695/GCA_000683695.1_Stap_aure_VET0301R_V1	-	VET0301R
Staphylococcus aureus VET0298R	1422565	PRJNA228656	228656	Terrabacteria group	Firmicutes	2.80781	32.8	-	JIOX01	33	2954	2761	4/17/14	3/4/17	Contig	Broad Institute	SAMN02404148	GCA_000683715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/715/GCA_000683715.1_Stap_aure_VET0298R_V1	-	VET0298R
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.57192	52.2	-	MXTQ01	50	4597	4334	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358872	GCA_002060535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/535/GCA_002060535.1_ASM206053v1	-	BCW_3310
Escherichia coli	562	PRJNA335932	335932	Proteobacteria	Gammaproteobacteria	5.46451	50.6	-	MPAI01	337	5864	5427	2/16/17	3/2/17	Contig	The University of Sydney	SAMN05567359	GCA_002002845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/002/845/GCA_002002845.1_ASM200284v1	-	4.2-R3
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28693	65.4	-	CNIO01	179	4296	4041	3/23/15	3/12/17	Scaffold	SC	SAMEA1019151	GCA_001394735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/735/GCA_001394735.1_6540_8_1	-	Bir 286
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10318	39.5	-	CRCR01	59	2317	2089	3/23/15	3/4/17	Scaffold	SC	SAMEA1024860	GCA_001162165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/165/GCA_001162165.1_6731_3_12	-	SMRU1044
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10848	39.6	-	CLBI01	44	2310	2049	3/21/15	3/6/17	Scaffold	SC	SAMEA1025863	GCA_001162185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/185/GCA_001162185.1_6871_1_20	-	SMRU1796
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32189	65.4	-	CNJF01	189	4330	4033	3/23/15	3/12/17	Scaffold	SC	SAMEA1019154	GCA_001394755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/755/GCA_001394755.1_6570_5_1	-	Bir 166
Escherichia coli	562	PRJNA361442	361442	Proteobacteria	Gammaproteobacteria	4.89572	50.7398	plasmid pMCRpoa:NZ_CM007714.1/CM007714.1	MTJV01	117	5206	4770	2/23/17	2/25/17	Contig	Hospital de Clinicas de Porto Alegre	SAMN06233851	GCA_002006525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/525/GCA_002006525.1_ASM200652v1	-	3431F
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.62953	52.1	-	MXTV01	56	4666	4396	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368347	GCA_002060575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/575/GCA_002060575.1_ASM206057v1	-	BCW_3304
Staphylococcus aureus VET0293R	1422560	PRJNA228651	228651	Terrabacteria group	Firmicutes	2.81435	32.8	-	JIPC01	38	2956	2759	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404143	GCA_000683735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/735/GCA_000683735.1_Stap_aure_VET0293R_V1	-	VET0293R
Staphylococcus aureus VET0251R	1422532	PRJNA228623	228623	Terrabacteria group	Firmicutes	2.7357	32.8	-	JIQE01	36	2808	2620	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404115	GCA_000683755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/755/GCA_000683755.1_Stap_aure_VET0251R_V1	-	VET0251R
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83819	52.1	-	MXUA01	38	4940	4714	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368343	GCA_002060595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/595/GCA_002060595.1_ASM206059v1	-	BCW_3295
Escherichia coli	562	PRJNA351833	351833	Proteobacteria	Gammaproteobacteria	4.77591	50.7	-	MOAH01	84	4964	4673	2/24/17	2/27/17	Contig	INRA	SAMN05954874	GCA_002006865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/865/GCA_002006865.1_ASM200686v1	-	BG1
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31928	65.3	-	CNIM01	154	4301	4018	3/23/15	3/12/17	Scaffold	SC	SAMEA1019155	GCA_001394775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/775/GCA_001394775.1_6540_8_11	-	Bir 296
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.1503	39.5	-	CKII01	78	2398	2154	3/21/15	3/4/17	Scaffold	SC	SAMEA1023859	GCA_001162225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/225/GCA_001162225.1_6631_4_14	-	14
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.08174	39.7	-	CMHZ01	60	2311	2088	3/23/15	3/4/17	Scaffold	SC	SAMEA1029351	GCA_001162245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/245/GCA_001162245.1_7038_6_3	-	SMRU2979
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28442	65.4	-	CNEI01	193	4289	4017	3/23/15	3/12/17	Scaffold	SC	SAMEA1019157	GCA_001394795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/795/GCA_001394795.1_6540_1_18	-	Bir 135
Escherichia coli	562	PRJNA360328	360328	Proteobacteria	Gammaproteobacteria	5.29668	50.4	-	MTPL01	343	5692	5019	2/27/17	3/5/17	Contig	"Fujian Center for Disease Control and Prevention, Fujian province, China"	SAMN06209159	GCA_002006965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/006/965/GCA_002006965.1_ASM200696v1	-	2010137Y
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.8406	52.2	-	MXUD01	29	4942	4716	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368341	GCA_002060605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/605/GCA_002060605.1_ASM206060v1	-	BCW_3292
Staphylococcus aureus VET0244R	1422529	PRJNA228620	228620	Terrabacteria group	Firmicutes	2.74927	32.8	-	JIQH01	29	2839	2659	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404112	GCA_000683775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/775/GCA_000683775.1_Stap_aure_VET0244R_V1	-	VET0244R
Staphylococcus aureus VET0235R	1422524	PRJNA228615	228615	Terrabacteria group	Firmicutes	2.76769	32.8	-	JIQM01	28	2887	2698	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404107	GCA_000683795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/795/GCA_000683795.1_Stap_aure_VET0235R_V1	-	VET0235R
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83885	52.1	-	MXUB01	27	4947	4714	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368342	GCA_002060635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/635/GCA_002060635.1_ASM206063v1	-	BCW_3294
Escherichia coli	562	PRJNA374891	374891	Proteobacteria	Gammaproteobacteria	4.6992	50.7144	plasmid pfertility_factor:NZ_CM007715.1/CM007715.1	MVJG01	121	4907	4595	2/27/17	3/2/17	Contig	University of Wisconsin Madison	SAMN06339461	GCA_002007165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/007/165/GCA_002007165.1_ASM200716v1	-	LS5218
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.346	65.3	-	CIEA01	176	4301	4051	4/21/15	3/12/17	Scaffold	SC	SAMEA1019163	GCA_001394815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/815/GCA_001394815.1_6540_3_9	-	Bir 177
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.15187	39.6	-	CMGI01	45	2378	2114	3/22/15	3/4/17	Scaffold	SC	SAMEA1029383	GCA_001162265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/265/GCA_001162265.1_7038_4_19	-	SMRU2947
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.04134	39.7	-	CPOE01	54	2222	2013	3/23/15	3/4/17	Scaffold	SC	SAMEA1020478	GCA_001162305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/305/GCA_001162305.1_6259_1_2	-	SN28306
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.34401	65.5	-	CNIN01	130	4270	3992	3/23/15	3/13/17	Scaffold	SC	SAMEA1019164	GCA_001394835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/835/GCA_001394835.1_6540_7_9	-	Bir 270
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.33193	50.5	-	MVLB01	258	5880	5328	3/3/17	3/6/17	Contig	FDA	SAMN06220105	GCA_002015195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/195/GCA_002015195.1_ASM201519v1	-	UMDKSU-2013-3-109D
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83881	52.1	-	MXTW01	203	5030	4717	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358869	GCA_002060645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/645/GCA_002060645.1_ASM206064v1	-	BCW_3300
Staphylococcus aureus VET0232R	1422523	PRJNA228614	228614	Terrabacteria group	Firmicutes	2.77259	32.9	-	JIQN01	36	2870	2685	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404106	GCA_000683815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/815/GCA_000683815.1_Stap_aure_VET0232R_V1	-	VET0232R
Staphylococcus aureus VET0229R	1422521	PRJNA228612	228612	Terrabacteria group	Firmicutes	2.76538	32.8	-	JIQP01	25	2878	2697	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404104	GCA_000683835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/835/GCA_000683835.1_Stap_aure_VET0229R_V1	-	VET0229R
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.58541	52.2	-	MXUG01	33	4660	4407	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358791	GCA_002060675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/675/GCA_002060675.1_ASM206067v1	-	BCW_3073
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.28191	50.5	-	MVLA01	254	5806	5258	3/3/17	3/6/17	Contig	FDA	SAMN06220106	GCA_002015205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/205/GCA_002015205.1_ASM201520v1	-	UMDKSU-2013-3-98B
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28318	65.3	-	CNIP01	220	4319	4027	3/23/15	3/12/17	Scaffold	SC	SAMEA1019169	GCA_001394875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/875/GCA_001394875.1_6540_8_14	-	Bir 299
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10611	39.6	-	CMFC01	88	2338	2092	3/21/15	3/4/17	Scaffold	SC	SAMEA1028894	GCA_001162365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/365/GCA_001162365.1_7011_5_6	-	SMRU2790
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.18605	39.6	-	CRPP01	78	2429	2204	3/22/15	3/4/17	Scaffold	SC	SAMEA1024936	GCA_001162425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/425/GCA_001162425.1_6775_1_24	-	SMRU840
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33998	65.4	-	CNGC01	170	4312	4031	3/23/15	3/12/17	Scaffold	SC	SAMEA1019171	GCA_001394895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/895/GCA_001394895.1_6540_3_8	-	Bir 176
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.16515	50.5	-	MVKZ01	150	5565	5140	3/3/17	3/6/17	Contig	FDA	SAMN06220107	GCA_002015235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/235/GCA_002015235.1_ASM201523v1	-	UMDKSU-2013-3-73A
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69337	52.1	-	MXUJ01	24	4793	4550	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358788	GCA_002060695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/695/GCA_002060695.1_ASM206069v1	-	BCW_3070
Staphylococcus aureus VET0219R	1422515	PRJNA228606	228606	Terrabacteria group	Firmicutes	2.83199	32.8	-	JIQV01	54	2965	2768	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404098	GCA_000683855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/855/GCA_000683855.1_Stap_aure_VET0219R_V1	-	VET0219R
Staphylococcus aureus VET0203R	1422503	PRJNA228594	228594	Terrabacteria group	Firmicutes	2.73896	32.9	-	JIRD01	27	2836	2657	4/17/14	3/4/17	Contig	Broad Institute	SAMN02404086	GCA_000683875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/875/GCA_000683875.1_Stap_aure_VET0203R_V1	-	VET0203R
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.68794	52.1	-	MXUK01	38	4757	4516	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358787	GCA_002060705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/705/GCA_002060705.1_ASM206070v1	-	BCW_3069
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.25377	50.5	-	MVLC01	217	5684	5253	3/3/17	3/6/17	Contig	FDA	SAMN06220104	GCA_002015255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/255/GCA_002015255.1_ASM201525v1	-	UMDKSU-2013-3-141E
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30913	65.4	-	CNMB01	173	4310	4059	3/23/15	3/12/17	Scaffold	SC	SAMEA1019178	GCA_001394915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/915/GCA_001394915.1_7054_1_15	-	Bir 414
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.17411	39.6	-	CPON01	93	2404	2153	3/23/15	3/4/17	Scaffold	SC	SAMEA1408341	GCA_001162465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/465/GCA_001162465.1_7444_8_69	-	0303+13263
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09971	39.7	-	CKAD01	143	2255	1996	3/21/15	3/15/17	Scaffold	SC	SAMEA974673	GCA_001162485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/485/GCA_001162485.1_6259_6_12	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30339	65.4	-	CNFY01	149	4296	4033	3/23/15	3/12/17	Scaffold	SC	SAMEA1019179	GCA_001394935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/935/GCA_001394935.1_6540_3_23	-	Bir 191
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.21108	50.6	-	MVLE01	216	5689	5217	3/3/17	3/6/17	Contig	FDA	SAMN06220102	GCA_002015265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/265/GCA_002015265.1_ASM201526v1	-	UMDKSU-2013-3-435B
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.8111	52.2	-	MXUF01	45	4907	4638	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358792	GCA_002060735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/735/GCA_002060735.1_ASM206073v1	-	BCW_3074
Staphylococcus aureus VET0197R	1422497	PRJNA228588	228588	Terrabacteria group	Firmicutes	2.76913	32.8	-	JIRG01	28	2883	2698	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404080	GCA_000683895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/895/GCA_000683895.1_Stap_aure_VET0197R_V1	-	VET0197R
Staphylococcus aureus VET0191R	1422491	PRJNA228582	228582	Terrabacteria group	Firmicutes	2.81643	32.9	-	JIRL01	53	2941	2753	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404074	GCA_000683915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/915/GCA_000683915.1_Stap_aure_VET0191R_V1	-	VET0191R
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.54603	52.2	-	MXUI01	36	4593	4353	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358789	GCA_002060755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/755/GCA_002060755.1_ASM206075v1	-	BCW_3071
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.18684	50.6	-	MVLD01	193	5583	5165	3/3/17	3/6/17	Contig	FDA	SAMN06220103	GCA_002015275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/275/GCA_002015275.1_ASM201527v1	-	UMDKSU-2013-3-134A
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31837	65.4	-	CNIG01	166	4324	4017	3/23/15	3/12/17	Scaffold	SC	SAMEA1019181	GCA_001394955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/955/GCA_001394955.1_6540_7_23	-	Bir 284
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.07562	39.6	-	CPPA01	103	2264	2074	3/22/15	3/4/17	Scaffold	SC	SAMEA770017	GCA_001162525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/525/GCA_001162525.1_5242_2_6	-	9N/6
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.05541	39.6	-	CKJF01	76	2266	2019	3/21/15	3/15/17	Scaffold	SC	SAMEA1023713	GCA_001162545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/545/GCA_001162545.1_6631_5_13	-	18C
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32781	65.4	-	CNFX01	161	4298	4042	3/23/15	3/12/17	Scaffold	SC	SAMEA1019183	GCA_001394975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/975/GCA_001394975.1_6540_3_22	-	Bir 190
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.67162	50.5	-	MVLF01	388	6322	5751	3/3/17	3/6/17	Contig	FDA	SAMN06220101	GCA_002015315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/315/GCA_002015315.1_ASM201531v1	-	UMDKSU-2013-3-492A
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66592	52.2	-	MXUM01	51	4733	4500	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358785	GCA_002060775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/775/GCA_002060775.1_ASM206077v1	-	BCW_3067
Staphylococcus aureus VET0184R	1422485	PRJNA228576	228576	Terrabacteria group	Firmicutes	2.83237	32.9	-	JIRP01	39	2936	2740	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404068	GCA_000683935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/935/GCA_000683935.1_Stap_aure_VET0184R_V1	-	VET0184R
Staphylococcus aureus VET0183R	1422484	PRJNA228575	228575	Terrabacteria group	Firmicutes	2.82877	32.9	-	JIRQ01	37	2913	2741	4/17/14	3/4/17	Contig	Broad Institute	SAMN02404067	GCA_000683955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/955/GCA_000683955.1_Stap_aure_VET0183R_V1	-	VET0183R
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.55168	52.2	-	MXUL01	48	4635	4384	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358786	GCA_002060785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/785/GCA_002060785.1_ASM206078v1	-	BCW_3068
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.23914	50.5	-	MVLH01	188	5703	5277	3/3/17	3/6/17	Contig	FDA	SAMN06220099	GCA_002015325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/325/GCA_002015325.1_ASM201532v1	-	UMDKSU-2013-3-331C
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29865	65.4	-	CNJC01	168	4298	4039	3/22/15	3/12/17	Scaffold	SC	SAMEA1019184	GCA_001394995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/995/GCA_001394995.1_6540_8_7	-	Bir 292
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99114	39.8	-	CQRE01	42	2208	1987	3/23/15	3/11/17	Scaffold	SC	SAMEA970200	GCA_001162585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/585/GCA_001162585.1_5159_8_1	-	BHN642
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.15926	39.8	-	CNAF01	103	2358	2039	3/23/15	3/10/17	Scaffold	SC	SAMEA1022930	GCA_001162685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/685/GCA_001162685.1_6930_7_15	-	212
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32719	65.4	-	CNKA01	175	4321	4046	3/22/15	3/12/17	Scaffold	SC	SAMEA1019185	GCA_001395015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/015/GCA_001395015.1_6570_6_15	-	Bir 347
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.155	50.6	-	MVLG01	131	5528	5139	3/3/17	3/6/17	Contig	FDA	SAMN06220100	GCA_002015355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/355/GCA_002015355.1_ASM201535v1	-	UMDKSU-2013-3-296D
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.81776	52	-	MXUN01	340	4832	4583	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358784	GCA_002060795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/795/GCA_002060795.1_ASM206079v1	-	BCW_3066
Staphylococcus aureus VET0159R	1422471	PRJNA228562	228562	Terrabacteria group	Firmicutes	2.85798	32.9	-	JISD01	65	2994	2788	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404054	GCA_000683975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/975/GCA_000683975.1_Stap_aure_VET0159R_V1	-	VET0159R
Staphylococcus aureus VET0158R	1422470	PRJNA228561	228561	Terrabacteria group	Firmicutes	2.73289	32.8	-	JISE01	32	2800	2622	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404053	GCA_000683995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/683/995/GCA_000683995.1_Stap_aure_VET0158R_V1	-	VET0158R
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.73871	52.1	-	MXUO01	73	4886	4513	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358783	GCA_002060805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/805/GCA_002060805.1_ASM206080v1	-	BCW_3065
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.18753	50.6	-	MVLI01	172	5628	5169	3/3/17	3/6/17	Contig	FDA	SAMN06220098	GCA_002015365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/365/GCA_002015365.1_ASM201536v1	-	UMDKSU-2013-3-416C
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28527	65.3	-	CNGI01	172	4319	4044	3/22/15	3/12/17	Scaffold	SC	SAMEA1019192	GCA_001395035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/035/GCA_001395035.1_6540_5_1	-	Bir 21
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.16536	39.7	-	CMTU01	101	2333	2038	3/23/15	3/10/17	Scaffold	SC	SAMEA1022817	GCA_001162705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/705/GCA_001162705.1_5737_3_12	-	203_15
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09584	39.7	-	CKVF01	58	2316	2096	3/21/15	3/11/17	Scaffold	SC	SAMEA1025887	GCA_001162725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/725/GCA_001162725.1_6823_3_3	-	SMRU1899
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32801	65.5	-	CNFM01	152	4318	4030	3/23/15	3/12/17	Scaffold	SC	SAMEA1019194	GCA_001395055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/055/GCA_001395055.1_6540_2_9	-	Bir 151
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.20903	50.5	-	MVLJ01	201	5650	5198	3/3/17	3/6/17	Contig	FDA	SAMN06220097	GCA_002015375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/375/GCA_002015375.1_ASM201537v1	-	UMDKSU-2013-3-533B
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.77231	52.2	-	MXUP01	90	4888	4652	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358782	GCA_002060855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/855/GCA_002060855.1_ASM206085v1	-	BCW_3064
Staphylococcus aureus VET0157R	1422469	PRJNA228560	228560	Terrabacteria group	Firmicutes	2.83075	32.8	-	JISF01	36	2949	2769	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404052	GCA_000684015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/015/GCA_000684015.1_Stap_aure_VET0157R_V1	-	VET0157R
Staphylococcus aureus VET0154R	1422466	PRJNA228557	228557	Terrabacteria group	Firmicutes	2.76496	32.8	-	JISI01	28	2878	2699	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404049	GCA_000684035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/035/GCA_000684035.1_Stap_aure_VET0154R_V1	-	VET0154R
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.74711	52.1	-	MXUV01	62	4826	4593	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358775	GCA_002060865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/865/GCA_002060865.1_ASM206086v1	-	BCW_3057
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.20379	50.5	-	MVLK01	191	5637	5195	3/3/17	3/6/17	Contig	FDA	SAMN06220096	GCA_002015385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/385/GCA_002015385.1_ASM201538v1	-	UMDKSU-2013-3-536F
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32559	65.4	-	CNHE01	160	4300	4031	3/23/15	3/12/17	Scaffold	SC	SAMEA1019196	GCA_001395075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/075/GCA_001395075.1_6540_6_16	-	Bir 251
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12386	39.6	-	CQUP01	55	2331	2112	3/22/15	3/11/17	Scaffold	SC	SAMEA1025568	GCA_001162765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/765/GCA_001162765.1_6710_6_3	-	SMRU1347
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10648	39.7	-	CRIC01	76	2354	2105	3/23/15	3/11/17	Scaffold	SC	SAMEA1025148	GCA_001162865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/865/GCA_001162865.1_6736_8_23	-	SMRU1319
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31842	65.5	-	CNMJ01	153	4291	4048	3/23/15	3/12/17	Scaffold	SC	SAMEA1019197	GCA_001395095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/095/GCA_001395095.1_7054_1_24	-	Bir 423
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.46957	50.6	-	MVLS01	315	6079	5543	3/3/17	3/6/17	Contig	FDA	SAMN06220091	GCA_002015435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/435/GCA_002015435.1_ASM201543v1	-	UMDKSU-2013-3-174C
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.35558	51.3	-	MXUX01	156	5402	4967	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358773	GCA_002060875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/875/GCA_002060875.1_ASM206087v1	-	BCW_3055
Staphylococcus aureus VET0150R	1422463	PRJNA228554	228554	Terrabacteria group	Firmicutes	2.75853	32.8	-	JISL01	33	2859	2681	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404046	GCA_000684055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/055/GCA_000684055.1_Stap_aure_VET0150R_V1	-	VET0150R
Staphylococcus aureus VET0141R	1422461	PRJNA228552	228552	Terrabacteria group	Firmicutes	2.78425	32.9	-	JISN01	50	2907	2716	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404044	GCA_000684075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/075/GCA_000684075.1_Stap_aure_VET0141R_V1	-	VET0141R
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89753	52.2	-	MXUR01	83	5024	4785	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358780	GCA_002060885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/885/GCA_002060885.1_ASM206088v1	-	BCW_3062
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.23499	50.6	-	MVLL01	213	5669	5208	3/3/17	3/6/17	Contig	FDA	SAMN06220095	GCA_002015455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/455/GCA_002015455.1_ASM201545v1	-	UMDKSU-2013-3-526E
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32375	65.4	-	CNJT01	162	4311	4040	3/22/15	3/12/17	Scaffold	SC	SAMEA1019198	GCA_001395115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/115/GCA_001395115.1_6570_6_1	-	Bir 333
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.12362	39.8	-	CPNA01	242	2307	2119	3/23/15	3/11/17	Scaffold	SC	SAMEA682598	GCA_001162905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/905/GCA_001162905.1_5381_3_2	-	09B06515
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.0559	39.7	-	CRDX01	72	2270	2046	3/22/15	3/11/17	Scaffold	SC	SAMEA1024713	GCA_001163045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/045/GCA_001163045.1_6731_4_7	-	SMRU1063
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.3189	65.4	-	CNEB01	223	4335	4024	3/23/15	3/12/17	Scaffold	SC	SAMEA1019200	GCA_001395135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/135/GCA_001395135.1_6540_1_1	-	Bir 17
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.31675	50.6	-	MVLR01	180	5775	5342	3/3/17	3/6/17	Contig	FDA	SAMN06220092	GCA_002015465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/465/GCA_002015465.1_ASM201546v1	-	UMDKSU-2013-3-144B
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.58319	52.3	-	MXUY01	61	4650	4422	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358772	GCA_002060935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/935/GCA_002060935.1_ASM206093v1	-	BCW_3054
Staphylococcus aureus VET0136R	1422459	PRJNA228550	228550	Terrabacteria group	Firmicutes	2.80562	32.9	-	JISP01	57	2929	2739	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404042	GCA_000684095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/095/GCA_000684095.1_Stap_aure_VET0136R_V1	-	VET0136R
Staphylococcus aureus VET0125R	1422450	PRJNA228541	228541	Terrabacteria group	Firmicutes	2.85673	32.9	-	JISY01	65	3010	2805	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404033	GCA_000684115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/115/GCA_000684115.1_Stap_aure_VET0125R_V1	-	VET0125R
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.60031	52.1	-	MXVB01	66	4737	4332	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358769	GCA_002060945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/945/GCA_002060945.1_ASM206094v1	-	BCW_3051
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.51887	50.6	-	MVLN01	318	6141	5589	3/3/17	3/6/17	Contig	FDA	SAMN06220079	GCA_002015475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/475/GCA_002015475.1_ASM201547v1	-	UMDKSU-2013-3-104A
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33281	65.5	-	CHWL01	160	4309	4032	4/21/15	3/12/17	Scaffold	SC	SAMEA1019202	GCA_001395155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/155/GCA_001395155.1_6540_3_21	-	Bir 189
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.12057	39.6	-	CKMW01	66	2327	2060	3/21/15	3/11/17	Scaffold	SC	SAMEA1024196	GCA_001163065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/065/GCA_001163065.1_6649_8_21	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.20604	39.4	-	CMDR01	110	2422	2176	3/21/15	3/11/17	Scaffold	SC	SAMEA1028817	GCA_001163085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/085/GCA_001163085.1_7011_4_11	-	SMRU2771
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.3402	65.5	-	CNMA01	175	4325	4054	3/23/15	3/12/17	Scaffold	SC	SAMEA1019204	GCA_001395175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/175/GCA_001395175.1_7054_1_13	-	Bir 412
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.44577	50.6	-	MVLV01	326	6026	5487	3/3/17	3/6/17	Contig	FDA	SAMN06220088	GCA_002015515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/515/GCA_002015515.1_ASM201551v1	-	UMDKSU-2013-3-409B
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.68815	52.2	-	MXVI01	57	4786	4534	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358715	GCA_002060975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/975/GCA_002060975.1_ASM206097v1	-	BCW_2909
Staphylococcus aureus VET0120R	1422447	PRJNA228538	228538	Terrabacteria group	Firmicutes	2.79749	32.8	-	JITB01	51	2932	2722	4/17/14	3/4/17	Contig	Broad Institute	SAMN02404030	GCA_000684135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/135/GCA_000684135.1_Stap_aure_VET0120R_V1	-	VET0120R
Staphylococcus aureus VET0113R	1422441	PRJNA228532	228532	Terrabacteria group	Firmicutes	2.79314	32.8	-	JITH01	46	2902	2707	4/17/14	3/4/17	Contig	Broad Institute	SAMN02404024	GCA_000684155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/155/GCA_000684155.1_Stap_aure_VET0113R_V1	-	VET0113R
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.82114	52.1	-	MXVH01	84	4932	4667	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358716	GCA_002060995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/995/GCA_002060995.1_ASM206099v1	-	BCW_2910
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.37558	50.6	-	MVMI01	252	5884	5409	3/3/17	3/6/17	Contig	FDA	SAMN06220128	GCA_002015535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/535/GCA_002015535.1_ASM201553v1	-	UMDKSU-2014-5-288B
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31743	65.4	-	CNKB01	167	4320	4044	3/23/15	3/12/17	Scaffold	SC	SAMEA1019210	GCA_001395195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/195/GCA_001395195.1_6570_6_14	-	Bir 346
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99319	39.8	-	CQQR01	43	2202	1991	3/22/15	3/10/17	Scaffold	SC	SAMEA970259	GCA_001163185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/185/GCA_001163185.1_5159_6_1	-	BHN616
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12738	39.6	-	CRUD01	62	2354	2117	3/23/15	3/10/17	Scaffold	SC	SAMEA1025442	GCA_001163205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/205/GCA_001163205.1_6805_5_2	-	SMRU1682
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30778	65.4	-	CNHF01	163	4318	4029	3/22/15	3/13/17	Scaffold	SC	SAMEA1019211	GCA_001395215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/215/GCA_001395215.1_6540_6_15	-	Bir 250
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.45453	50.6	-	MVMQ01	280	5998	5515	3/3/17	3/6/17	Contig	FDA	SAMN06220120	GCA_002015545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/545/GCA_002015545.1_ASM201554v1	-	UMDKSU-2014-5-650B
Salmonella enterica subsp. enterica serovar Colindale	1967991	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72572	52.1	-	MXVJ01	74	4796	4561	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368769	GCA_002061015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/015/GCA_002061015.1_ASM206101v1	-	BCW_2908
Staphylococcus aureus VET0111R	1422439	PRJNA228530	228530	Terrabacteria group	Firmicutes	2.76778	32.9	-	JITJ01	36	2858	2681	4/17/14	3/4/17	Contig	Broad Institute	SAMN02404022	GCA_000684175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/175/GCA_000684175.1_Stap_aure_VET0111R_V1	-	VET0111R
Staphylococcus aureus VET0102R	1422433	PRJNA228523	228523	Terrabacteria group	Firmicutes	2.75373	32.8	-	JITP01	35	2847	2658	4/17/14	3/3/17	Contig	Broad Institute	SAMN02404016	GCA_000684195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/195/GCA_000684195.1_Stap_aure_VET0102R_V1	-	VET0102R
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.84121	52	-	MXVK01	64	4952	4676	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358714	GCA_002061035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/035/GCA_002061035.1_ASM206103v1	-	BCW_2907
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.65112	50.5	-	MVMW01	381	6262	5690	3/3/17	3/6/17	Contig	FDA	SAMN06220114	GCA_002015555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/555/GCA_002015555.1_ASM201555v1	-	UMDKSU-2014-5-933A
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33204	65.4	-	CNFK01	152	4328	4058	3/23/15	3/12/17	Scaffold	SC	SAMEA1019212	GCA_001395235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/235/GCA_001395235.1_6540_2_7	-	Bir 149
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.03546	39.7	-	CPOV01	89	2248	2021	3/23/15	3/10/17	Scaffold	SC	SAMEA1886106	GCA_001163285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/285/GCA_001163285.1_6246_4_17	-	3900-06
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14827	39.5	-	CKEO01	151	2378	2131	3/21/15	3/14/17	Scaffold	SC	SAMEA1024121	GCA_001163305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/305/GCA_001163305.1_6630_2_4	-	40
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31762	65.4	-	CNLY01	159	4304	4063	3/22/15	3/12/17	Scaffold	SC	SAMEA1019214	GCA_001395255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/255/GCA_001395255.1_7054_1_11	-	Bir 410
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.32203	50.6	-	MVLP01	187	5786	5346	3/3/17	3/6/17	Contig	FDA	SAMN06220077	GCA_002015595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/595/GCA_002015595.1_ASM201559v1	-	UMDKSU-2013-3-135A
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.58517	52.2	-	MXVM01	71	4656	4381	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358712	GCA_002061055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/055/GCA_002061055.1_ASM206105v1	-	BCW_2905
Staphylococcus aureus VET0081R	1422415	PRJNA228505	228505	Terrabacteria group	Firmicutes	2.82488	32.9	-	JIUH01	54	2963	2769	4/17/14	3/3/17	Contig	Broad Institute	SAMN02403998	GCA_000684215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/215/GCA_000684215.1_Stap_aure_VET0081R_V1	-	VET0081R
Staphylococcus aureus VET0078R	1422413	PRJNA228503	228503	Terrabacteria group	Firmicutes	2.85238	32.9	-	JIUJ01	57	2979	2780	4/17/14	3/4/17	Contig	Broad Institute	SAMN02403996	GCA_000684235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/235/GCA_000684235.1_Stap_aure_VET0078R_V1	-	VET0078R
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.68837	52.1	-	MXVE01	73	4800	4548	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358766	GCA_002061075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/075/GCA_002061075.1_ASM206107v1	-	BCW_3048
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.59058	50.5	-	MVMU01	344	6160	5613	3/3/17	3/6/17	Contig	FDA	SAMN06220116	GCA_002015615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/615/GCA_002015615.1_ASM201561v1	-	UMDKSU-2014-5-888D
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.27857	65.4	-	CNEF01	206	4303	4020	3/23/15	3/12/17	Scaffold	SC	SAMEA1019215	GCA_001395275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/275/GCA_001395275.1_6540_1_13	-	Bir 130
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.07415	39.7	-	CLKH01	71	2305	2088	3/21/15	3/10/17	Scaffold	SC	SAMEA1029313	GCA_001163345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/345/GCA_001163345.1_6938_3_22	-	SMRU3147
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.02759	39.6	-	CPOG01	65	2201	1976	3/23/15	3/10/17	Scaffold	SC	SAMEA1020730	GCA_001163425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/425/GCA_001163425.1_6569_5_20	-	WL_845
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.3332	65.5	-	CNFO01	132	4296	4020	3/23/15	3/12/17	Scaffold	SC	SAMEA1019217	GCA_001395295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/295/GCA_001395295.1_6540_3_20	-	Bir 188
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.40501	50.6	-	MVLM01	309	5977	5442	3/3/17	3/6/17	Contig	FDA	SAMN06220080	GCA_002015625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/625/GCA_002015625.1_ASM201562v1	-	UMDKSU-2013-3-80A
Salmonella enterica subsp. enterica serovar Liverpool	216804	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.76605	52.2	-	MXVN01	107	4812	4533	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368768	GCA_002061095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/095/GCA_002061095.1_ASM206109v1	-	BCW_2904
Staphylococcus aureus VET0058R	1422397	PRJNA228487	228487	Terrabacteria group	Firmicutes	2.73566	32.9	-	JIUZ01	31	2832	2657	4/17/14	3/4/17	Contig	Broad Institute	SAMN02403980	GCA_000684255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/255/GCA_000684255.1_Stap_aure_VET0058R_V1	-	VET0058R
Staphylococcus aureus VET0050R	1422390	PRJNA228480	228480	Terrabacteria group	Firmicutes	2.78802	32.8	-	JIVG01	45	2926	2744	4/17/14	3/4/17	Contig	Broad Institute	SAMN02403973	GCA_000684275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/275/GCA_000684275.1_Stap_aure_VET0050R_V1	-	VET0050R
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.73619	52.1	-	MXVD01	70	4880	4506	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358767	GCA_002061105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/105/GCA_002061105.1_ASM206110v1	-	BCW_3049
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.51889	50.6	-	MVLO01	320	6122	5578	3/3/17	3/6/17	Contig	FDA	SAMN06220078	GCA_002015635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/635/GCA_002015635.1_ASM201563v1	-	UMDKSU-2013-3-118A
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.334	65.4	-	CNKG01	167	4316	4029	3/22/15	3/12/17	Scaffold	SC	SAMEA1019219	GCA_001395315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/315/GCA_001395315.1_6570_6_21	-	Bir 353
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.23077	39.4	-	CMCF01	79	2468	2219	3/21/15	3/11/17	Scaffold	SC	SAMEA1029287	GCA_001163465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/465/GCA_001163465.1_7004_7_68	-	SMRU2900
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07996	39.8	-	CQXV01	54	2307	2089	3/23/15	3/11/17	Scaffold	SC	SAMEA1024818	GCA_001163505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/505/GCA_001163505.1_6730_3_10	-	SMRU610
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30224	65.3	-	CNEK01	195	4331	3995	3/22/15	3/12/17	Scaffold	SC	SAMEA1019222	GCA_001395335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/335/GCA_001395335.1_6540_1_2	-	Bir 19
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.31634	50.6	-	MVLQ01	177	5782	5344	3/3/17	3/6/17	Contig	FDA	SAMN06220076	GCA_002015675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/675/GCA_002015675.1_ASM201567v1	-	UMDKSU-2013-3-141B
Salmonella enterica subsp. enterica serovar Derby	28144	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.85036	52	-	MXVR01	82	4950	4688	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368764	GCA_002061135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/135/GCA_002061135.1_ASM206113v1	-	BCW_2899
Staphylococcus aureus VE08/02242ST1	1413450	PRJNA226403	226403	Terrabacteria group	Firmicutes	2.76559	32.9	-	JIVI01	42	2879	2693	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391277	GCA_000684295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/295/GCA_000684295.1_Stap_aure_VE08_02242ST1_V1	-	VE08/02242ST1
Staphylococcus aureus USA_6	1413603	PRJNA226559	226559	Terrabacteria group	Firmicutes	2.80414	32.9	-	JIVO01	38	2910	2734	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391430	GCA_000684315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/315/GCA_000684315.1_Stap_aure_USA_6_V1	-	USA_6
Salmonella enterica subsp. enterica serovar Poona	436295	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.6079	52.1	-	MXRC01	57	4650	4406	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368803	GCA_002061145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/145/GCA_002061145.1_ASM206114v1	-	BCW_3986
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.44451	50.6	-	MVLT01	321	6028	5484	3/3/17	3/6/17	Contig	FDA	SAMN06220090	GCA_002015695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/695/GCA_002015695.1_ASM201569v1	-	UMDKSU-2013-3-304D
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.2891	65.4	-	CNKS01	173	4308	4017	3/23/15	3/12/17	Scaffold	SC	SAMEA1019228	GCA_001395355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/355/GCA_001395355.1_6570_7_12	-	Bir 368
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.26154	39.6	-	CLHG01	34	2491	2223	3/21/15	3/11/17	Scaffold	SC	SAMEA1026151	GCA_001163525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/525/GCA_001163525.1_6925_4_8	-	SMRU2144
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.0783	39.7	-	CLDW01	157	2313	2096	3/21/15	3/4/17	Scaffold	SC	SAMEA1025871	GCA_001163545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/545/GCA_001163545.1_6899_5_7	-	SMRU2047
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28139	65.4	-	CNJB01	179	4306	4034	3/23/15	3/12/17	Scaffold	SC	SAMEA1019229	GCA_001395375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/375/GCA_001395375.1_6540_8_24	-	Bir 309
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.42074	50.6	-	MVLU01	327	6002	5487	3/3/17	3/6/17	Contig	FDA	SAMN06220089	GCA_002015705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/705/GCA_002015705.1_ASM201570v1	-	UMDKSU-2013-3-314B
Salmonella enterica subsp. enterica serovar Haifa	192956	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.78525	52.2	-	MXVS01	84	4880	4651	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368763	GCA_002061155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/155/GCA_002061155.1_ASM206115v1	-	BCW_2898
Staphylococcus aureus Tur-5	1413566	PRJNA226521	226521	Terrabacteria group	Firmicutes	2.86105	32.8	-	JIVW01	67	2972	2774	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391393	GCA_000684335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/335/GCA_000684335.1_Stap_aure_Tur-5_V1	-	Tur-5
Staphylococcus aureus Tur-4	1413553	PRJNA226508	226508	Terrabacteria group	Firmicutes	2.84207	32.8	-	JIVX01	60	2976	2773	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391380	GCA_000684355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/355/GCA_000684355.1_Stap_aure_Tur-4_V1	-	Tur-4
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7343	52.2	-	MXRD01	457	4989	4511	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368802	GCA_002061195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/195/GCA_002061195.1_ASM206119v1	-	BCW_3985
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.45661	50.5	-	MVLX01	344	6083	5549	3/3/17	3/6/17	Contig	FDA	SAMN06220086	GCA_002015735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/735/GCA_002015735.1_ASM201573v1	-	UMDKSU-2013-3-552F
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.24914	65.4	-	CNEP01	315	4301	3990	3/23/15	3/12/17	Scaffold	SC	SAMEA1019233	GCA_001395395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/395/GCA_001395395.1_6540_1_4	-	Bir 32
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.13333	39.5	-	CRDQ01	103	2350	2093	3/22/15	3/4/17	Scaffold	SC	SAMEA1024759	GCA_001163645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/645/GCA_001163645.1_6731_4_21	-	SMRU1077
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.22581	39.5	-	CPNR01	94	2474	2217	3/23/15	3/4/17	Scaffold	SC	SAMEA1408206	GCA_001163685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/685/GCA_001163685.1_7444_8_1	-	9511+06158
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31907	65.4	-	CNKD01	159	4291	4011	3/22/15	3/13/17	Scaffold	SC	SAMEA1019237	GCA_001395415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/415/GCA_001395415.1_6570_6_18	-	Bir 350
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.45869	50.5	-	MVLW01	329	6070	5528	3/3/17	3/6/17	Contig	FDA	SAMN06220087	GCA_002015755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/755/GCA_002015755.1_ASM201575v1	-	UMDKSU-2013-3-539F
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.74826	52.2	-	MXRE01	88	4849	4611	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368801	GCA_002061205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/205/GCA_002061205.1_ASM206120v1	-	BCW_3984
Staphylococcus aureus S64_POEL	1413487	PRJNA226441	226441	Terrabacteria group	Firmicutes	2.81636	32.8	-	JIWP01	51	2948	2755	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391314	GCA_000684375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/375/GCA_000684375.1_Stap_aure_S64_POEL_V1	-	S64_POEL
Staphylococcus aureus S63_POEL	1413486	PRJNA226440	226440	Terrabacteria group	Firmicutes	2.87187	32.9	-	JIWQ01	64	3023	2816	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391313	GCA_000684395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/395/GCA_000684395.1_Stap_aure_S63_POEL_V1	-	S63_POEL
Salmonella enterica subsp. enterica serovar Montevideo	115981	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.73726	52.3	-	MXRG01	137	4880	4575	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368799	GCA_002061225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/225/GCA_002061225.1_ASM206122v1	-	BCW_3982
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.47011	50.6	-	MVLZ01	294	6033	5546	3/3/17	3/6/17	Contig	FDA	SAMN06220084	GCA_002015765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/765/GCA_002015765.1_ASM201576v1	-	UMDKSU-2014-5-7C
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.34187	65.5	-	CNMY01	166	4297	4051	3/22/15	3/12/17	Scaffold	SC	SAMEA1019245	GCA_001395455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/455/GCA_001395455.1_7054_2_52	-	Bir 451
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	1.99654	39.8	-	CRFN01	38	2194	1954	3/22/15	3/4/17	Scaffold	SC	SAMEA1025505	GCA_001163745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/745/GCA_001163745.1_6736_4_4	-	SMRU1204
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.05783	39.6	-	CLAM01	48	2260	2016	3/21/15	3/4/17	Scaffold	SC	SAMEA1025657	GCA_001163765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/765/GCA_001163765.1_6841_7_10	-	SMRU1330
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.3206	65.4	-	CNHI01	181	4319	4027	3/23/15	3/12/17	Scaffold	SC	SAMEA1019246	GCA_001395475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/475/GCA_001395475.1_6540_6_18	-	Bir 253
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.4245	50.6	-	MVLY01	339	6002	5473	3/3/17	3/6/17	Contig	FDA	SAMN06220085	GCA_002015775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/775/GCA_002015775.1_ASM201577v1	-	UMDKSU-2013-3-557A
Salmonella enterica subsp. enterica serovar Berta	28142	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.75156	52.2	-	MXRI01	55	4851	4607	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368797	GCA_002061255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/255/GCA_002061255.1_ASM206125v1	-	BCW_3980
Staphylococcus aureus Rd.290	1413565	PRJNA226520	226520	Terrabacteria group	Firmicutes	2.77427	32.8	-	JIXA01	25	2870	2697	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391392	GCA_000684415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/415/GCA_000684415.1_Stap_aure_Rd_290_V1	-	Rd.290
Staphylococcus aureus MSSA-47	1413494	PRJNA226448	226448	Terrabacteria group	Firmicutes	2.83442	32.8	-	JIXO01	60	2992	2770	4/17/14	3/4/17	Contig	Broad Institute	SAMN02391321	GCA_000684435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/435/GCA_000684435.1_Stap_aure_MSSA-47_V1	-	MSSA-47
Salmonella enterica subsp. enterica serovar Poona	436295	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.58973	52.2	-	MXRM01	72	4625	4381	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368793	GCA_002061265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/265/GCA_002061265.1_ASM206126v1	-	BCW_3976
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.47584	50.6	-	MVMA01	293	6040	5553	3/3/17	3/6/17	Contig	FDA	SAMN06220083	GCA_002015815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/815/GCA_002015815.1_ASM201581v1	-	UMDKSU-2014-5-10D
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29828	65.4	-	CNER01	187	4321	4042	3/22/15	3/12/17	Scaffold	SC	SAMEA1019248	GCA_001395495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/495/GCA_001395495.1_6540_2_11	-	Bir 153
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.23143	39.4	-	CMQL01	62	2462	2196	3/23/15	3/4/17	Scaffold	SC	SAMEA2061738	GCA_001163785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/785/GCA_001163785.1_9803_8_16	-	6B
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07136	39.5	-	CRQV01	53	2304	2069	3/23/15	3/4/17	Scaffold	SC	SAMEA1024904	GCA_001163805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/805/GCA_001163805.1_6791_6_20	-	SMRU644
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.2864	65.4	-	CNJA01	161	4291	4030	3/22/15	3/12/17	Scaffold	SC	SAMEA1019249	GCA_001395515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/515/GCA_001395515.1_6540_8_23	-	Bir 308
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.3814	50.6	-	MVMB01	258	5874	5414	3/3/17	3/6/17	Contig	FDA	SAMN06220082	GCA_002015825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/825/GCA_002015825.1_ASM201582v1	-	UMDKSU-2014-5-58F
Salmonella enterica subsp. enterica serovar Oranienburg	28147	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.58798	52.1	-	MXRR01	41	4632	4402	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368789	GCA_002061275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/275/GCA_002061275.1_ASM206127v1	-	BCW_3971
Staphylococcus aureus MSSA-37	1413493	PRJNA226447	226447	Terrabacteria group	Firmicutes	2.83193	32.8	-	JIXP01	60	2989	2782	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391320	GCA_000684455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/455/GCA_000684455.1_Stap_aure_MSSA-37_V1	-	MSSA-37
Staphylococcus aureus MSSA-123	1413496	PRJNA226451	226451	Terrabacteria group	Firmicutes	2.89711	32.9	-	JIXQ01	63	3058	2849	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391323	GCA_000684475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/475/GCA_000684475.1_Stap_aure_MSSA-123_V1	-	MSSA-123
Salmonella enterica subsp. enterica serovar Anatum	58712	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.65972	52.2	-	MXRS01	77	4722	4502	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368788	GCA_002061315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/315/GCA_002061315.1_ASM206131v1	-	BCW_3970
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.38149	50.6	-	MVMC01	260	5880	5414	3/3/17	3/6/17	Contig	FDA	SAMN06220081	GCA_002015855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/855/GCA_002015855.1_ASM201585v1	-	UMDKSU-2014-5-82A
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29984	65.4	-	CNJD01	163	4301	4029	3/22/15	3/12/17	Scaffold	SC	SAMEA1019250	GCA_001395535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/535/GCA_001395535.1_6540_8_8	-	Bir 293
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.14595	39.5	-	CRIH01	81	2357	2117	3/23/15	3/6/17	Scaffold	SC	SAMEA1025531	GCA_001163825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/825/GCA_001163825.1_6736_8_3	-	SMRU1299
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.00494	39.7	-	CMMN01	53	2169	1956	3/22/15	3/4/17	Scaffold	SC	SAMEA1029275	GCA_001163865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/865/GCA_001163865.1_7068_4_15	-	SMRU3135
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.2786	65.4	-	CNEG01	211	4294	4019	3/23/15	3/12/17	Scaffold	SC	SAMEA1019251	GCA_001395555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/555/GCA_001395555.1_6540_1_15	-	Bir 132
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.40572	50.6	-	MVMD01	217	5917	5452	3/3/17	3/6/17	Contig	FDA	SAMN06220135	GCA_002015875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/875/GCA_002015875.1_ASM201587v1	-	UMDKSU-2014-5-89A
Salmonella enterica subsp. enterica serovar Javiana	363569	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.54811	52.2	-	MXSC01	489	4845	4308	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368778	GCA_002061335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/335/GCA_002061335.1_ASM206133v1	-	BCW_3959
Staphylococcus aureus GD2010-169	1413536	PRJNA226491	226491	Terrabacteria group	Firmicutes	2.77907	32.9	-	JIXZ01	53	2875	2684	4/17/14	3/4/17	Contig	Broad Institute	SAMN02391363	GCA_000684495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/495/GCA_000684495.1_Stap_aure_GD2010-169_V1	-	GD2010-169
Staphylococcus aureus GD2010-159	1413535	PRJNA226490	226490	Terrabacteria group	Firmicutes	2.77558	32.9	-	JIYB01	36	2885	2697	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391362	GCA_000684515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/515/GCA_000684515.1_Stap_aure_GD2010-159_V1	-	GD2010-159
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.74702	52.1	-	MXRW01	169	4889	4594	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368784	GCA_002061345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/345/GCA_002061345.1_ASM206134v1	-	BCW_3965
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.41059	50.6	-	MVME01	201	5923	5466	3/3/17	3/6/17	Contig	FDA	SAMN06220134	GCA_002015885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/885/GCA_002015885.1_ASM201588v1	-	UMDKSU-2014-5-94C
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31766	65.4	-	CNKC01	161	4307	4028	3/23/15	3/12/17	Scaffold	SC	SAMEA1019253	GCA_001395575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/575/GCA_001395575.1_6570_6_16	-	Bir 348
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.0845	39.6	-	CLWK01	79	2296	2069	3/21/15	3/4/17	Scaffold	SC	SAMEA1026243	GCA_001163905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/905/GCA_001163905.1_6983_4_92	-	SMRU2300
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.13941	39.7	-	CMWK01	96	2272	1986	3/23/15	3/6/17	Scaffold	SC	SAMEA1022862	GCA_001163945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/945/GCA_001163945.1_5919_1_2	-	104
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29141	65.4	-	CNEQ01	209	4290	4019	3/22/15	3/12/17	Scaffold	SC	SAMEA1019256	GCA_001395595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/595/GCA_001395595.1_6540_1_5	-	Bir 122
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.45763	50.6	-	MVMF01	284	5979	5511	3/3/17	3/6/17	Contig	FDA	SAMN06220133	GCA_002015895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/895/GCA_002015895.1_ASM201589v1	-	UMDKSU-2014-5-138A
Salmonella enterica subsp. enterica serovar Onireke	1967653	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.81535	52.1	-	MXVP01	81	4824	4567	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368766	GCA_002061365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/365/GCA_002061365.1_ASM206136v1	-	BCW_2901
Staphylococcus aureus C3452	1413473	PRJNA226426	226426	Terrabacteria group	Firmicutes	2.83328	32.8	-	JIZF01	48	2961	2760	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391300	GCA_000684535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/535/GCA_000684535.1_Stap_aure_C3452_V1	-	C3452
Staphylococcus aureus C0676	1413511	PRJNA226466	226466	Terrabacteria group	Firmicutes	2.83366	32.9	-	JIZR01	45	2949	2771	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391338	GCA_000684555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/555/GCA_000684555.1_Stap_aure_C0676_V1	-	C0676
Salmonella enterica subsp. enterica serovar Javiana	363569	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.5506	52.2	-	MXSE01	54	4621	4371	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368777	GCA_002061385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/385/GCA_002061385.1_ASM206138v1	-	BCW_3957
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.46487	50.6	-	MVMH01	265	6007	5512	3/3/17	3/6/17	Contig	FDA	SAMN06220131	GCA_002015935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/935/GCA_002015935.1_ASM201593v1	-	UMDKSU-2014-5-140E
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30856	65.4	-	CNJR01	149	4313	4056	3/22/15	3/12/17	Scaffold	SC	SAMEA1019258	GCA_001395615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/615/GCA_001395615.1_6570_5_4	-	Bir 312
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.98946	39.8	-	CQRS01	42	2207	1985	3/22/15	3/4/17	Scaffold	SC	SAMEA970210	GCA_001163965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/965/GCA_001163965.1_5159_8_4	-	BHN645
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.10652	39.6	-	CMCB01	73	2365	2115	3/21/15	3/4/17	Scaffold	SC	SAMEA1029331	GCA_001164025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/025/GCA_001164025.1_7004_7_63	-	SMRU2895
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31312	65.4	-	CIIG01	157	4285	4020	4/21/15	3/12/17	Scaffold	SC	SAMEA1019259	GCA_001395635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/635/GCA_001395635.1_6540_3_18	-	Bir 186
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.59855	50.5	-	MVMJ01	335	6220	5705	3/3/17	3/6/17	Contig	FDA	SAMN06220127	GCA_002015945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/945/GCA_002015945.1_ASM201594v1	-	UMDKSU-2014-5-330A
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.62968	52.1	-	MXSF01	48	4750	4490	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03357937	GCA_002061415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/415/GCA_002061415.1_ASM206141v1	-	BCW_3956
Staphylococcus aureus C0626	1413507	PRJNA226462	226462	Terrabacteria group	Firmicutes	2.80467	32.8	-	JIZV01	27	2901	2738	4/17/14	3/4/17	Contig	Broad Institute	SAMN02391334	GCA_000684575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/575/GCA_000684575.1_Stap_aure_C0626_V1	-	C0626
Staphylococcus aureus 81629	1413325	PRJNA226278	226278	Terrabacteria group	Firmicutes	2.80706	32.9	-	JJAH01	49	2936	2747	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391152	GCA_000684595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/595/GCA_000684595.1_Stap_aure_81629_V1	-	81629
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.5971	52.1	-	MXSL01	78	4698	4441	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358939	GCA_002061425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/425/GCA_002061425.1_ASM206142v1	-	BCW_3425
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.65902	50.6	-	MVMK01	361	6300	5770	3/3/17	3/6/17	Contig	FDA	SAMN06220126	GCA_002015965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/965/GCA_002015965.1_ASM201596v1	-	UMDKSU-2014-5-332A
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30957	65.4	-	CNJE01	145	4288	4004	3/22/15	3/12/17	Scaffold	SC	SAMEA1019265	GCA_001395655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/655/GCA_001395655.1_6540_8_9	-	Bir 294
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.1721	39.5	-	CQXO01	105	2420	2166	3/23/15	3/4/17	Scaffold	SC	SAMEA1025025	GCA_001164045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/045/GCA_001164045.1_6730_1_23	-	SMRU599
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10685	39.5	-	CQVD01	65	2318	2106	3/23/15	3/4/17	Scaffold	SC	SAMEA1025372	GCA_001164065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/065/GCA_001164065.1_6710_7_18	-	SMRU1386
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32799	65.4	-	CNHH01	152	4313	4037	3/22/15	3/12/17	Scaffold	SC	SAMEA1019266	GCA_001395675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/675/GCA_001395675.1_6540_6_17	-	Bir 252
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.45409	50.6	-	MVMG01	275	5982	5510	3/3/17	3/6/17	Contig	FDA	SAMN06220132	GCA_002015975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/015/975/GCA_002015975.1_ASM201597v1	-	UMDKSU-2014-5-139D
Salmonella enterica subsp. enterica serovar Javiana	363569	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.67916	52	-	MXSN01	30	4743	4502	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368398	GCA_002061445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/445/GCA_002061445.1_ASM206144v1	-	BCW_3423
Staphylococcus aureus 63-D10	1413343	PRJNA226296	226296	Terrabacteria group	Firmicutes	2.80457	32.9	-	JJAN01	45	2932	2737	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391170	GCA_000684615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/615/GCA_000684615.1_Stap_aure_63-D10_V1	-	63-D10
Staphylococcus aureus 53180-1	1413388	PRJNA226341	226341	Terrabacteria group	Firmicutes	2.80639	32.9	-	JJAW01	42	2939	2754	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391215	GCA_000684635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/635/GCA_000684635.1_Stap_aure_53180-1_V1	-	53180-1
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69783	52.1	-	MXSQ01	40	4793	4556	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368392	GCA_002061465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/465/GCA_002061465.1_ASM206146v1	-	BCW_3417
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.38786	50.6	-	MVMM01	287	5874	5411	3/3/17	3/6/17	Contig	FDA	SAMN06220124	GCA_002016015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/015/GCA_002016015.1_ASM201601v1	-	UMDKSU-2014-5-548J
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.27486	65.5	-	CNKE01	151	4250	3947	3/23/15	3/12/17	Scaffold	SC	SAMEA1019270	GCA_001395695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/695/GCA_001395695.1_6570_6_17	-	Bir 349
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07541	39.5	-	CRUF01	56	2292	2048	3/23/15	3/4/17	Scaffold	SC	SAMEA1025173	GCA_001164085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/085/GCA_001164085.1_6805_5_23	-	SMRU1703
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.22082	39.5	-	CPOY01	89	2464	2212	3/23/15	3/10/17	Scaffold	SC	SAMEA1408323	GCA_001164105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/105/GCA_001164105.1_7444_8_12	-	9612+28032
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31058	65.4	-	CNKT01	181	4309	4013	3/22/15	3/12/17	Scaffold	SC	SAMEA1019271	GCA_001395715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/715/GCA_001395715.1_6570_7_14	-	Bir 370
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.48725	50.6	-	MVML01	307	6033	5539	3/3/17	3/6/17	Contig	FDA	SAMN06220125	GCA_002016025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/025/GCA_002016025.1_ASM201602v1	-	UMDKSU-2014-5-370H
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.94132	52.1	-	MXSS01	91	5151	4807	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368388	GCA_002061495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/495/GCA_002061495.1_ASM206149v1	-	BCW_3413
Staphylococcus aureus 45(2607)	1413547	PRJNA226502	226502	Terrabacteria group	Firmicutes	2.84116	32.9	-	JJAZ01	49	2960	2767	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391374	GCA_000684655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/655/GCA_000684655.1_Stap_aure_452607_V1	-	45(2607)
Staphylococcus aureus 28(3K2-5)	1413544	PRJNA226499	226499	Terrabacteria group	Firmicutes	2.76153	32.8	-	JJBI01	46	2866	2673	4/17/14	3/4/17	Contig	Broad Institute	SAMN02391371	GCA_000684675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/675/GCA_000684675.1_Stap_aure_283K2-5_V1	-	28(3K2-5)
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.11027	51.5	-	MXST01	1265	5860	4921	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368387	GCA_002061505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/505/GCA_002061505.1_ASM206150v1	-	NCTR-SF853
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.45174	50.6	-	MVMN01	283	5999	5504	3/3/17	3/6/17	Contig	FDA	SAMN06220123	GCA_002016055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/055/GCA_002016055.1_ASM201605v1	-	UMDKSU-2014-5-610A
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30845	65.4	-	CNIY01	186	4306	3997	3/23/15	3/12/17	Scaffold	SC	SAMEA1019276	GCA_001395735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/735/GCA_001395735.1_6540_8_22	-	Bir 307
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09285	39.6	-	CKDZ01	92	2305	2020	3/21/15	3/14/17	Scaffold	SC	SAMEA1023985	GCA_001164145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/145/GCA_001164145.1_6630_1_4	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.17115	39.7	-	CMGE01	40	2400	2133	3/22/15	3/10/17	Scaffold	SC	SAMEA1029286	GCA_001164265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/265/GCA_001164265.1_7038_4_12	-	SMRU2940
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32209	65.4	-	CNKU01	173	4320	4033	3/22/15	3/12/17	Scaffold	SC	SAMEA1019281	GCA_001395755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/755/GCA_001395755.1_6570_7_15	-	Bir 371
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.45241	50.6	-	MVMO01	281	6000	5502	3/3/17	3/6/17	Contig	FDA	SAMN06220122	GCA_002016065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/065/GCA_002016065.1_ASM201606v1	-	UMDKSU-2014-5-611A
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.77423	52	-	MXSW01	54	4884	4633	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368382	GCA_002061515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/515/GCA_002061515.1_ASM206151v1	-	BCW_3407
Staphylococcus aureus 22(2K81-5)	1413543	PRJNA226498	226498	Terrabacteria group	Firmicutes	2.87919	32.8	-	JJBX01	56	3016	2813	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391370	GCA_000684695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/695/GCA_000684695.1_Stap_aure_222K81-5_V1	-	22(2K81-5)
Staphylococcus aureus 2011-60-2275-7	1413522	PRJNA226477	226477	Terrabacteria group	Firmicutes	2.88467	32.9	-	JJBY01	57	3039	2836	4/17/14	3/4/17	Contig	Broad Institute	SAMN02391349	GCA_000684715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/715/GCA_000684715.1_Stap_aure_2011-60-2275-7_V1	-	2011-60-2275-7
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.22445	51.2	-	MXSV01	1033	5737	5017	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368384	GCA_002061535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/535/GCA_002061535.1_ASM206153v1	-	NCTR-SF826
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.45428	50.6	-	MVMR01	286	5985	5509	3/3/17	3/6/17	Contig	FDA	SAMN06220119	GCA_002016075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/075/GCA_002016075.1_ASM201607v1	-	UMDKSU-2014-5-655A
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.34587	65.4	-	CNLX01	177	4333	4065	3/22/15	3/12/17	Scaffold	SC	SAMEA1019282	GCA_001395775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/775/GCA_001395775.1_7054_1_10	-	Bir 409
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.08144	39.7	-	CMVS01	102	2205	1975	3/23/15	3/10/17	Scaffold	SC	SAMEA1989538	GCA_001164305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/305/GCA_001164305.1_5756_5_6	-	269
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.13429	39.5	-	CRSA01	27	2366	2124	3/23/15	3/10/17	Scaffold	SC	SAMEA1025489	GCA_001164365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/365/GCA_001164365.1_6805_2_17	-	SMRU1433
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28831	65.4	-	CNEV01	225	4296	4016	3/23/15	3/12/17	Scaffold	SC	SAMEA1019285	GCA_001395795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/795/GCA_001395795.1_6540_1_8	-	Bir 125
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.45273	50.6	-	MVMP01	291	5996	5511	3/3/17	3/6/17	Contig	FDA	SAMN06220121	GCA_002016085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/085/GCA_002016085.1_ASM201608v1	-	UMDKSU-2014-5-614A
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.87811	52.1	-	MXSY01	74	5002	4745	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358938	GCA_002061575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/575/GCA_002061575.1_ASM206157v1	-	BCW_3403
Staphylococcus aureus 1484-9	1413394	PRJNA226347	226347	Terrabacteria group	Firmicutes	2.7543	32.9	-	JJCS01	39	2828	2643	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391221	GCA_000684735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/735/GCA_000684735.1_Stap_aure_1484-9_V1	-	1484-9
Staphylococcus aureus 12S00972	1413367	PRJNA226320	226320	Terrabacteria group	Firmicutes	2.74242	32.7	-	JJCZ01	67	2833	2665	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391194	GCA_000684755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/755/GCA_000684755.1_Stap_aure_12S00972_V1	-	12S00972
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.58971	51.8	-	MXTC01	111	4608	4214	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358936	GCA_002061585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/585/GCA_002061585.1_ASM206158v1	-	BCW_3399
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.50227	50.6	-	MVMS01	291	6048	5558	3/3/17	3/6/17	Contig	FDA	SAMN06220118	GCA_002016135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/135/GCA_002016135.1_ASM201613v1	-	UMDKSU-2014-5-841G
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31632	65.4	-	CNKR01	162	4323	4031	3/23/15	3/12/17	Scaffold	SC	SAMEA1019286	GCA_001395815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/815/GCA_001395815.1_6570_7_1	-	Bir 357
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09013	39.7	-	CQVE01	53	2304	2088	3/23/15	3/11/17	Scaffold	SC	SAMEA1025359	GCA_001164385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/385/GCA_001164385.1_6710_7_4	-	SMRU1372
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09411	39.7	-	CLDK01	60	2318	2089	3/21/15	3/10/17	Scaffold	SC	SAMEA1026049	GCA_001164425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/425/GCA_001164425.1_6899_5_12	-	SMRU2052
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.34784	65.5	-	CNML01	170	4319	4048	3/23/15	3/12/17	Scaffold	SC	SAMEA1019288	GCA_001395835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/835/GCA_001395835.1_7054_1_28	-	Bir 427
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.50681	50.6	-	MVMT01	295	6083	5573	3/3/17	3/6/17	Contig	FDA	SAMN06220117	GCA_002016155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/155/GCA_002016155.1_ASM201615v1	-	UMDKSU-2014-5-863D
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.74281	51.9	-	MXTD01	452	5164	4592	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368376	GCA_002061615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/615/GCA_002061615.1_ASM206161v1	-	NCTR-SF488
Staphylococcus aureus 11S01420	1413362	PRJNA226315	226315	Terrabacteria group	Firmicutes	2.77786	32.6	-	JJDH01	68	2895	2715	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391189	GCA_000684775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/775/GCA_000684775.1_Stap_aure_11S01420_V1	-	11S01420
Staphylococcus aureus 1111001578	1413430	PRJNA226383	226383	Terrabacteria group	Firmicutes	2.81591	32.9	-	JJDU01	47	2924	2726	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391257	GCA_000684795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/795/GCA_000684795.1_Stap_aure_1111001578_V1	-	1111001578
Salmonella enterica subsp. enterica serovar Copenhagen	486990	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.00718	52.1	-	MXTE01	147	5178	4930	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368375	GCA_002061625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/625/GCA_002061625.1_ASM206162v1	-	BCW_3397
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.5877	50.5	-	MVMV01	353	6155	5603	3/3/17	3/6/17	Contig	FDA	SAMN06220115	GCA_002016165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/165/GCA_002016165.1_ASM201616v1	-	UMDKSU-2014-5-925A
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.35512	65.5	-	CNMK01	165	4317	4096	3/23/15	3/12/17	Scaffold	SC	SAMEA1019291	GCA_001395855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/855/GCA_001395855.1_7054_1_27	-	Bir 426
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09876	39.7	-	CKTZ01	51	2322	2092	3/21/15	3/11/17	Scaffold	SC	SAMEA1025822	GCA_001164485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/485/GCA_001164485.1_6823_2_2	-	SMRU1874
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09633	39.6	-	CKTM01	70	2292	2066	3/21/15	3/10/17	Scaffold	SC	SAMEA1026233	GCA_001164565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/565/GCA_001164565.1_6823_1_19	-	SMRU1867
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30255	65.4	-	CNIW01	163	4315	4031	3/22/15	3/12/17	Scaffold	SC	SAMEA1019293	GCA_001395875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/875/GCA_001395875.1_6540_8_21	-	Bir 306
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.42072	50.6	-	MVMX01	336	5936	5454	3/3/17	3/6/17	Contig	FDA	SAMN06220111	GCA_002016195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/195/GCA_002016195.1_ASM201619v1	-	UMDKSU-2014-5-1253A
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.9254	52.2	-	MXTJ01	98	5097	4839	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368360	GCA_002061655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/655/GCA_002061655.1_ASM206165v1	-	NCTR-SF88
Staphylococcus aureus 10S00488	1413357	PRJNA226310	226310	Terrabacteria group	Firmicutes	2.73389	32.9	-	JJEI01	32	2832	2652	4/17/14	3/4/17	Contig	Broad Institute	SAMN02391184	GCA_000684815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/815/GCA_000684815.1_Stap_aure_10S00488_V1	-	10S00488
Staphylococcus aureus 1(04GN_04-02-52-07)	1413560	PRJNA226515	226515	Terrabacteria group	Firmicutes	2.79647	32.8	-	JJEJ01	34	2904	2712	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391387	GCA_000684835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/835/GCA_000684835.1_Stap_aure_104GN_04-02-52-07_V1	-	1(04GN_04-02-52-07)
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.08221	52	-	MXTM01	362	5315	4992	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368354	GCA_002061665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/665/GCA_002061665.1_ASM206166v1	-	NCTR-SF35
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.78607	50.6	-	MVMY01	373	6484	5919	3/3/17	3/6/17	Contig	FDA	SAMN06220109	GCA_002016205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/205/GCA_002016205.1_ASM201620v1	-	UMDKSU-2014-5-1565C
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32631	65.4	-	CNKV01	166	4313	4046	3/23/15	3/12/17	Scaffold	SC	SAMEA1019295	GCA_001395895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/895/GCA_001395895.1_6570_7_16	-	Bir 372
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12141	39.6	-	CMHB01	60	2352	2120	3/22/15	3/11/17	Scaffold	SC	SAMEA1029306	GCA_001164585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/585/GCA_001164585.1_7038_5_24	-	SMRU2976
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.15871	39.6	-	CPSA01	140	2359	2141	3/23/15	3/10/17	Scaffold	SC	SAMEA682585	GCA_001164645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/645/GCA_001164645.1_5390_1_11	-	spnIC116
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.34179	65.4	-	CNNA01	165	4311	4063	3/23/15	3/13/17	Scaffold	SC	SAMEA1019297	GCA_001395915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/915/GCA_001395915.1_7054_2_68	-	Bir 467
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.42909	50.5	-	MVMZ01	345	6016	5491	3/3/17	3/6/17	Contig	FDA	SAMN06220108	GCA_002016215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/215/GCA_002016215.1_ASM201621v1	-	UMDKSU-2014-5-1838G
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.5727	52.2	-	MXTS01	50	4591	4336	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368351	GCA_002061695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/695/GCA_002061695.1_ASM206169v1	-	BCW_3308
Staphylococcus aureus 09S01694	1413356	PRJNA226309	226309	Terrabacteria group	Firmicutes	2.73969	32.9	-	JJEK01	40	2844	2654	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391183	GCA_000684855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/855/GCA_000684855.1_Stap_aure_09S01694_V1	-	09S01694
Staphylococcus aureus 09-00736	1413349	PRJNA226302	226302	Terrabacteria group	Firmicutes	2.78064	32.9	-	JJEM01	38	2869	2695	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391176	GCA_000684875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/875/GCA_000684875.1_Stap_aure_09-00736_V1	-	09-00736
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.56954	52.2	-	MXTT01	44	4594	4333	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368350	GCA_002061715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/715/GCA_002061715.1_ASM206171v1	-	BCW_3307
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.59376	50.5	-	MVNA01	385	6150	5600	3/3/17	3/6/17	Contig	FDA	SAMN06220113	GCA_002016225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/225/GCA_002016225.1_ASM201622v1	-	UMDKSU-2014-5-941B
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32222	65.4	-	CNJY01	177	4307	4042	3/23/15	3/12/17	Scaffold	SC	SAMEA1019299	GCA_001395935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/935/GCA_001395935.1_6570_6_13	-	Bir 345
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.24041	39.4	-	CJZK01	92	2488	2236	3/21/15	3/10/17	Scaffold	SC	SAMEA974678	GCA_001164705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/705/GCA_001164705.1_6259_5_13	-	6B
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.20247	39.5	-	CLZM01	111	2426	2182	3/21/15	3/10/17	Scaffold	SC	SAMEA1028928	GCA_001164725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/725/GCA_001164725.1_6983_8_87	-	SMRU2391
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33661	65.5	-	CNMM01	135	4298	4069	3/22/15	3/12/17	Scaffold	SC	SAMEA1019301	GCA_001395955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/955/GCA_001395955.1_7054_1_29	-	Bir 428
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.45029	50.5	-	MVNB01	375	6051	5513	3/3/17	3/6/17	Contig	FDA	SAMN06220112	GCA_002016275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/275/GCA_002016275.1_ASM201627v1	-	UMDKSU-2014-5-965B
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83938	52.2	-	MXTX01	53	4954	4718	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358868	GCA_002061725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/725/GCA_002061725.1_ASM206172v1	-	BCW_3299
Staphylococcus aureus 08-01229	1413346	PRJNA226299	226299	Terrabacteria group	Firmicutes	2.78168	32.9	-	JJET01	37	2883	2701	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391173	GCA_000684895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/895/GCA_000684895.1_Stap_aure_08-01229_V1	-	08-01229
Staphylococcus aureus 08-01062	1413345	PRJNA226298	226298	Terrabacteria group	Firmicutes	2.78215	32.9	-	JJEW01	35	2879	2695	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391172	GCA_000684915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/915/GCA_000684915.1_Stap_aure_08-01062_V1	-	08-01062
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.84412	52.2	-	MXTY01	45	4954	4722	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368345	GCA_002061735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/735/GCA_002061735.1_ASM206173v1	-	BCW_3297
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.54413	50.5	-	MVNC01	376	6156	5638	3/3/17	3/6/17	Contig	FDA	SAMN06220110	GCA_002016285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/285/GCA_002016285.1_ASM201628v1	-	UMDKSU-2014-5-1451D
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29554	65.4	-	CNIX01	162	4295	4027	3/22/15	3/12/17	Scaffold	SC	SAMEA1019303	GCA_001395975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/975/GCA_001395975.1_6540_8_5	-	Bir 290
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.0801	39.6	-	CQWY01	201	2250	2056	3/22/15	3/10/17	Scaffold	SC	SAMEA1023924	GCA_001164745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/745/GCA_001164745.1_6714_8_15	-	SMRU567
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12045	39.3	-	CROJ01	46	2295	2080	3/23/15	3/10/17	Scaffold	SC	SAMEA1025664	GCA_001164805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/805/GCA_001164805.1_6755_5_23	-	SMRU1175
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29185	65.4	-	CNET01	198	4296	4012	3/22/15	3/12/17	Scaffold	SC	SAMEA1019305	GCA_001395995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/995/GCA_001395995.1_6540_1_9	-	Bir 126
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	4.75824	50.8	-	MVNE01	124	4921	4637	3/3/17	3/6/17	Contig	FDA	SAMN06220093	GCA_002016295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/295/GCA_002016295.1_ASM201629v1	-	UMDKSU-2013-3-111C
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.84067	52.2	-	MXTZ01	54	4937	4709	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368344	GCA_002061775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/775/GCA_002061775.1_ASM206177v1	-	BCW_3296
Staphylococcus aureus 08-01059	1413344	PRJNA226297	226297	Terrabacteria group	Firmicutes	2.78117	32.9	-	JJEX01	38	2865	2691	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391171	GCA_000684955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/955/GCA_000684955.1_Stap_aure_08-01059_V1	-	08-01059
Staphylococcus aureus 07-03451	1413351	PRJNA226304	226304	Terrabacteria group	Firmicutes	2.69803	32.7	-	JJEY01	60	2797	2630	4/17/14	3/3/17	Contig	Broad Institute	SAMN02391178	GCA_000684985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/684/985/GCA_000684985.1_Stap_aure_07-03451_V1	-	07-03451
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.64206	52.3	-	MXUE01	76	4718	4474	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358793	GCA_002061785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/785/GCA_002061785.1_ASM206178v1	-	BCW_3075
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.3237	50.5	-	MVNF01	147	5633	5216	3/3/17	3/6/17	Contig	FDA	SAMN06220139	GCA_002016305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/305/GCA_002016305.1_ASM201630v1	-	UMDKSU-2013-3-99D
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31	65.3	-	CNGJ01	193	4317	4039	3/22/15	3/12/17	Scaffold	SC	SAMEA1019306	GCA_001396015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/015/GCA_001396015.1_6540_4_24	-	Bir 216
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.06385	39.6	-	CKFZ01	114	2281	2025	3/21/15	3/10/17	Scaffold	SC	SAMEA1023690	GCA_001164845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/845/GCA_001164845.1_6630_4_2	-	6A
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.2279	39.5	-	CLQP01	103	2469	2243	3/21/15	3/10/17	Scaffold	SC	SAMEA1028859	GCA_001164905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/905/GCA_001164905.1_6949_4_23	-	SMRU2495
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.3032	65.4	-	CNKI01	180	4287	4037	3/22/15	3/12/17	Scaffold	SC	SAMEA1019308	GCA_001396035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/035/GCA_001396035.1_6570_6_22	-	Bir 354
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.27146	50.5	-	MVNG01	157	5560	5142	3/3/17	3/6/17	Contig	FDA	SAMN06159500	GCA_002016355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/355/GCA_002016355.1_ASM201635v1	-	UMDKSU-2013-3-131E
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.81252	52	-	MXUH01	71	4853	4589	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358790	GCA_002061815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/815/GCA_002061815.1_ASM206181v1	-	BCW_3072
Staphylococcus aureus HST-077	1323660	PRJNA215675	215675	Terrabacteria group	Firmicutes	3.04566	32.7	-	AVPR01	170	3307	3057	5/5/14	3/4/17	Contig	Lebanese American University	SAMN02744534	GCA_000685335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/335/GCA_000685335.1_Draft_HST-077_Genome	-	HST-077
Staphylococcus aureus MM66	1457394	PRJNA237022	237022	Terrabacteria group	Firmicutes	2.83432	32.9	-	JMBT01	114	2994	2831	5/7/14	3/4/17	Contig	Oklahoma State University	SAMN02628796	GCA_000685445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/445/GCA_000685445.1_Final-MM66-454-contigs	-	MM66
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83805	52.2	-	MXUC01	57	4948	4717	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358866	GCA_002061825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/825/GCA_002061825.1_ASM206182v1	-	BCW_3293
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.32567	50.5	-	MVNH01	159	5621	5216	3/3/17	3/6/17	Contig	FDA	SAMN06159499	GCA_002016375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/375/GCA_002016375.1_ASM201637v1	-	UMDKSU-2013-3-132F
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.27973	65.4	-	CNEO01	198	4289	4030	3/22/15	3/12/17	Scaffold	SC	SAMEA1019309	GCA_001396055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/055/GCA_001396055.1_6540_1_24	-	Bir 142
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.02857	39.7	-	CPNX01	91	2217	1999	3/23/15	3/10/17	Scaffold	SC	SAMEA1020162	GCA_001164945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/945/GCA_001164945.1_6246_2_16	-	LMG779
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15422	39.7	-	CKCP01	53	2326	2072	3/21/15	3/10/17	Scaffold	SC	SAMEA1023670	GCA_001164965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/965/GCA_001164965.1_6593_4_4	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30828	65.3	-	CNIU01	201	4329	4031	3/23/15	3/12/17	Scaffold	SC	SAMEA1019315	GCA_001396075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/075/GCA_001396075.1_6540_8_18	-	Bir 303
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.31315	50.5	-	MVNI01	163	5611	5201	3/3/17	3/6/17	Contig	FDA	SAMN06159498	GCA_002016385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/385/GCA_002016385.1_ASM201638v1	-	UMDKSU-2013-3-164B
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.53822	52.1	-	MXUQ01	45	4632	4293	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358781	GCA_002061855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/855/GCA_002061855.1_ASM206185v1	-	BCW_3063
Staphylococcus aureus	1280	PRJNA237022	237022	Terrabacteria group	Firmicutes	2.733	33	-	JMBU01	197	2900	2705	5/7/14	3/3/17	Contig	Oklahoma State University	SAMN02693833	GCA_000685465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/685/465/GCA_000685465.1_FINAL-RVI-4-454-contigs	-	MM66RVI-4
Staphylococcus aureus subsp. aureus CO-99	904803	PRJNA53841	53841	Terrabacteria group	Firmicutes	2.78446	32.7	-	JHTV01	50	2925	2734	6/3/14	3/4/17	Contig	J. Craig Venter Institute	SAMN00138229	GCA_000697785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/697/785/GCA_000697785.1_gsaco99v01	-	CO-99
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72035	52.1	-	MXUS01	44	4832	4517	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358779	GCA_002061865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/865/GCA_002061865.1_ASM206186v1	-	BCW_3061
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.21372	50.4	-	MVNK01	131	5504	5126	3/3/17	3/6/17	Contig	FDA	SAMN06159506	GCA_002016405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/405/GCA_002016405.1_ASM201640v1	-	UMDKSU-2013-3-308C
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32182	65.4	-	CNMR01	176	4308	4072	3/22/15	3/12/17	Scaffold	SC	SAMEA1019317	GCA_001396095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/095/GCA_001396095.1_7054_1_38	-	Bir 437
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.067	39.6	-	CLTM01	70	2277	2044	3/21/15	3/11/17	Scaffold	SC	SAMEA1028806	GCA_001164985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/985/GCA_001164985.1_6972_5_2	-	SMRU2618
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.2277	39.6	-	CLCL01	70	2416	2192	3/21/15	3/4/17	Scaffold	SC	SAMEA1025983	GCA_001165125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/125/GCA_001165125.1_6899_4_11	-	SMRU2027
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30403	65.4	-	CNHG01	198	4320	4026	3/23/15	3/12/17	Scaffold	SC	SAMEA1019318	GCA_001396115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/115/GCA_001396115.1_6540_6_13	-	Bir 248
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.22126	50.4	-	MVNM01	134	5479	5100	3/3/17	3/6/17	Contig	FDA	SAMN06159504	GCA_002016435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/435/GCA_002016435.1_ASM201643v1	-	UMDKSU-2013-3-416C
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83669	52.2	-	MXUW01	81	4966	4723	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358774	GCA_002061895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/895/GCA_002061895.1_ASM206189v1	-	BCW_3056
Staphylococcus aureus subsp. aureus 21251	904742	PRJNA53637	53637	Terrabacteria group	Firmicutes	2.76354	32.7	-	JHTW01	62	2856	2708	6/3/14	3/4/17	Contig	J. Craig Venter Institute	SAMN00117458	GCA_000697845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/697/845/GCA_000697845.1_gsa21251v01	-	21251
Staphylococcus aureus subsp. aureus 21321	904765	PRJNA53683	53683	Terrabacteria group	Firmicutes	2.66673	32.7	-	JHTY01	90	2723	2579	6/3/14	3/4/17	Contig	J. Craig Venter Institute	SAMN00116857	GCA_000697865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/697/865/GCA_000697865.1_gsa21321v01	-	21321
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.71647	52.1	-	MXUU01	63	4789	4564	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358776	GCA_002061905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/905/GCA_002061905.1_ASM206190v1	-	BCW_3058
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.22359	50.4	-	MVNN01	112	5470	5106	3/3/17	3/6/17	Contig	FDA	SAMN06159503	GCA_002016455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/455/GCA_002016455.1_ASM201645v1	-	UMDKSU-2013-3-544F
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28814	65.4	-	CNED01	190	4292	4015	3/23/15	3/12/17	Scaffold	SC	SAMEA1019321	GCA_001396135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/135/GCA_001396135.1_6540_1_10	-	Bir 127
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12494	39.5	-	CRSB01	57	2366	2143	3/22/15	3/4/17	Scaffold	SC	SAMEA1025466	GCA_001165185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/185/GCA_001165185.1_6805_2_19	-	SMRU1435
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.05265	39.5	-	CKGL01	114	2233	1990	3/21/15	3/4/17	Scaffold	SC	SAMEA1023695	GCA_001165205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/205/GCA_001165205.1_6630_4_6	-	37
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.2876	65.4	-	CNEU01	200	4301	4021	3/23/15	3/12/17	Scaffold	SC	SAMEA1019322	GCA_001396155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/155/GCA_001396155.1_6540_2_1	-	Bir 143
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.22438	50.4	-	MVNO01	102	5466	5110	3/3/17	3/6/17	Contig	FDA	SAMN06159533	GCA_002016465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/465/GCA_002016465.1_ASM201646v1	-	UMDKSU-2013-3-540A
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.13273	51.4	-	MXUT01	85	5138	4743	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358777	GCA_002061935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/935/GCA_002061935.1_ASM206193v1	-	BCW_3059
Staphylococcus aureus subsp. aureus 21320	904764	PRJNA53681	53681	Terrabacteria group	Firmicutes	2.80735	32.7	-	JHTX01	58	2950	2786	6/3/14	3/4/17	Contig	J. Craig Venter Institute	SAMN00116843	GCA_000697885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/697/885/GCA_000697885.1_gsa21320v01	-	21320
Staphylococcus aureus	1280	PRJNA244506	244506	Terrabacteria group	Firmicutes	2.82102	32.7	-	JJOP01	121	2939	2748	6/4/14	3/3/17	Contig	Academy of Military Medical Sciences	SAMN02726876	GCA_000698045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/045/GCA_000698045.1_A69	-	A69
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.79727	52.2	-	MXUZ01	111	4909	4674	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358771	GCA_002061945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/945/GCA_002061945.1_ASM206194v1	-	BCW_3053
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.21892	50.4	-	MVNP01	94	5487	5128	3/3/17	3/6/17	Contig	FDA	SAMN06159532	GCA_002016475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/475/GCA_002016475.1_ASM201647v1	-	UMDKSU-2013-3-575A
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.35568	65.5	-	CNND01	134	4308	4077	3/23/15	3/12/17	Scaffold	SC	SAMEA1019323	GCA_001396175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/175/GCA_001396175.1_7054_2_77	-	Bir 476
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.0917	39.6	-	CRCQ01	46	2294	2049	3/23/15	3/4/17	Scaffold	SC	SAMEA1024887	GCA_001165285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/285/GCA_001165285.1_6731_3_13	-	SMRU1045
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.06836	39.6	-	CREI01	47	2297	2036	3/23/15	3/6/17	Scaffold	SC	SAMEA1024968	GCA_001165365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/365/GCA_001165365.1_6731_5_2	-	SMRU1082
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.27772	65.4	-	CNEE01	199	4283	4010	3/23/15	3/13/17	Scaffold	SC	SAMEA1019324	GCA_001396195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/195/GCA_001396195.1_6540_1_11	-	Bir 128
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.22386	50.4	-	MVND01	118	5472	5108	3/3/17	3/6/17	Contig	FDA	SAMN06220094	GCA_002016495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/495/GCA_002016495.1_ASM201649v1	-	UMDKSU-2013-3-75E
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.77469	52.1	-	MXVC01	87	4874	4642	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358768	GCA_002061975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/975/GCA_002061975.1_ASM206197v1	-	BCW_3050
Staphylococcus aureus	1280	PRJNA244513	244513	Terrabacteria group	Firmicutes	2.76094	32.7	-	JJON01	172	2841	2675	6/4/14	3/4/17	Contig	Academy of Military Medical Sciences	SAMN02727158	GCA_000698065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/065/GCA_000698065.1_A187	-	A187
Staphylococcus aureus	1280	PRJNA244512	244512	Terrabacteria group	Firmicutes	2.82476	32.7	-	JJOO01	139	2949	2767	6/4/14	3/3/17	Contig	Academy of Military Medical Sciences	SAMN02727157	GCA_000698085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/085/GCA_000698085.1_A71	-	A71
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.88525	52.2	-	MXVF01	99	5027	4778	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358765	GCA_002061995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/061/995/GCA_002061995.1_ASM206199v1	-	BCW_3047
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.28122	50.5	-	MVNL01	160	5583	5175	3/3/17	3/6/17	Contig	FDA	SAMN06159505	GCA_002016535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/535/GCA_002016535.1_ASM201653v1	-	UMDKSU-2013-3-314E
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28728	65.4	-	CNKJ01	159	4292	4020	3/23/15	3/12/17	Scaffold	SC	SAMEA1019330	GCA_001396215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/215/GCA_001396215.1_6570_6_23	-	Bir 355
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11287	39.7	-	CKTW01	65	2329	2111	3/21/15	3/4/17	Scaffold	SC	SAMEA1025690	GCA_001165445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/445/GCA_001165445.1_6823_2_10	-	SMRU1882
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.07828	39.6	-	CMSM01	61	2249	1998	3/22/15	3/4/17	Scaffold	SC	SAMEA2061735	GCA_001165465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/465/GCA_001165465.1_9803_8_7	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29645	65.4	-	CNBT01	185	4321	3963	3/22/15	3/12/17	Scaffold	SC	SAMEA961570	GCA_001396235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/235/GCA_001396235.1_6174_2_9	-	Bir 70
Escherichia coli	562	PRJNA342435	342435	Proteobacteria	Gammaproteobacteria	5.22097	50.4	-	MVNJ01	135	5469	5107	3/3/17	3/6/17	Contig	FDA	SAMN06159507	GCA_002016545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/545/GCA_002016545.1_ASM201654v1	-	UMDKSU-2013-3-178C
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7232	52.2	-	MXVG01	44	4817	4571	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358717	GCA_002062005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/005/GCA_002062005.1_ASM206200v1	-	BCW_2911
Staphylococcus aureus SA3-LAU	1429874	PRJNA229926	229926	Terrabacteria group	Firmicutes	2.80199	33	-	JHDV01	76	2953	2741	6/12/14	3/3/17	Contig	Lebanese American University	SAMN02851468	GCA_000705395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/395/GCA_000705395.1_Staphylococcus_aureus_SA3-LAU_WGS	-	SA3-LAU
Staphylococcus aureus SA5-LAU	1429875	PRJNA229927	229927	Terrabacteria group	Firmicutes	2.87104	32.8	-	JHDW01	48	3003	2830	6/12/14	3/3/17	Contig	Lebanese American University	SAMN02851470	GCA_000705415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/415/GCA_000705415.1_Staphylococcus_aureus_SA5-LAU_WGS	-	SA5-LAU
Salmonella enterica subsp. enterica serovar Havana	179997	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.05302	51.7	-	MXVQ01	346	5267	4829	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368765	GCA_002062035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/035/GCA_002062035.1_ASM206203v1	-	BCW_2900
Escherichia coli	562	PRJNA376025	376025	Proteobacteria	Gammaproteobacteria	5.08081	50.6	-	MWLH01	515	5245	4861	3/3/17	3/15/17	Contig	University of Sao Paulo	SAMN06349432	GCA_002018425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/425/GCA_002018425.1_ASM201842v1	-	ICBECAM7
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32201	65.4	-	CNBO01	185	4313	3982	3/23/15	3/13/17	Scaffold	SC	SAMEA961571	GCA_001396255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/255/GCA_001396255.1_6174_2_6	-	Bir 67
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07384	39.7	-	CKAM01	324	2312	2059	3/21/15	3/4/17	Scaffold	SC	SAMEA974702	GCA_001165485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/485/GCA_001165485.1_6259_6_23	-	23A
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.05083	39.5	-	CLFB01	77	2267	2042	3/21/15	3/4/17	Scaffold	SC	SAMEA1026116	GCA_001165525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/525/GCA_001165525.1_6899_7_13	-	SMRU2101
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29675	65.3	-	CNBN01	175	4323	3942	3/23/15	3/12/17	Scaffold	SC	SAMEA961572	GCA_001396275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/275/GCA_001396275.1_6174_2_7	-	Bir 68
Escherichia coli	562	PRJNA375984	375984	Proteobacteria	Gammaproteobacteria	4.94331	50.6	-	MWIR01	142	5169	4802	3/6/17	3/8/17	Contig	University of Sao Paulo	SAMN06349191	GCA_002018795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/795/GCA_002018795.1_ASM201879v1	-	ICBECAM8
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80928	52.1	-	MXVL01	47	4957	4700	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358713	GCA_002062045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/045/GCA_002062045.1_ASM206204v1	-	BCW_2906
Staphylococcus aureus SA6-LAU	1429876	PRJNA229928	229928	Terrabacteria group	Firmicutes	2.81754	32.8	-	JHDX01	58	2933	2759	6/12/14	3/3/17	Contig	Lebanese American University	SAMN02851467	GCA_000705435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/435/GCA_000705435.1_Staphylococcus_aureus_SA6-LAU_WGS	-	SA6-LAU
Staphylococcus aureus SA8-LAU	1429878	PRJNA229930	229930	Terrabacteria group	Firmicutes	2.82005	32.9	-	JHDZ01	85	2950	2754	6/12/14	3/3/17	Contig	Lebanese American University	SAMN02851472	GCA_000705455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/455/GCA_000705455.1_Staphylococcus_aureus_SA8-LAU_WGS	-	SA8-LAU
Salmonella enterica subsp. enterica serovar Muenster	82689	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.86899	51.9	-	MXVU01	91	5007	4756	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368761	GCA_002062055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/055/GCA_002062055.1_ASM206205v1	-	BCW_2896
Escherichia coli	562	PRJNA375983	375983	Proteobacteria	Gammaproteobacteria	5.06995	50.5	-	MWIQ01	152	5265	4834	3/6/17	3/8/17	Contig	University of Sao Paulo	SAMN06349182	GCA_002018815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/815/GCA_002018815.1_ASM201881v1	-	ICBECAM5
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30098	65.4	-	CNBS01	184	4330	3984	3/23/15	3/12/17	Scaffold	SC	SAMEA961574	GCA_001396295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/295/GCA_001396295.1_6174_2_5	-	Bir 66
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11764	39.4	-	CKUL01	58	2376	2132	3/21/15	3/4/17	Scaffold	SC	SAMEA1025845	GCA_001165565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/565/GCA_001165565.1_6823_2_22	-	SMRU1894
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11155	39.6	-	CKPS01	99	2370	2137	3/21/15	3/10/17	Scaffold	SC	SAMEA1024634	GCA_001165685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/685/GCA_001165685.1_6680_5_16	-	SMRU928
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.25167	65.2	-	CNBM01	422	4421	3944	3/23/15	3/12/17	Scaffold	SC	SAMEA961575	GCA_001396315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/315/GCA_001396315.1_6174_2_2	-	Bir 63
Escherichia coli	562	PRJNA375986	375986	Proteobacteria	Gammaproteobacteria	4.93006	50.6	-	MWIS01	154	5144	4763	3/6/17	3/8/17	Contig	University of Sao Paulo	SAMN06349193	GCA_002018825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/018/825/GCA_002018825.1_ASM201882v1	-	ICBECAM12
Salmonella enterica subsp. enterica serovar Potsdam	597	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.88528	52	-	MXVT01	216	5036	4704	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368762	GCA_002062095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/095/GCA_002062095.1_ASM206209v1	-	BCW_2897
Staphylococcus aureus SA7-LAU	1429877	PRJNA229929	229929	Terrabacteria group	Firmicutes	2.81859	32.8	-	JHDY01	49	2946	2785	6/12/14	3/3/17	Contig	Lebanese American University	SAMN02851469	GCA_000705475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/475/GCA_000705475.1_Staphylococcus_aureus_SA7-LAU_WGS	-	SA7-LAU
Staphylococcus aureus SA10	1452730	PRJNA236072	236072	Terrabacteria group	Firmicutes	2.93568	32.6	-	JDRT01	172	3104	2859	6/12/14	3/3/17	Contig	Istituto Giannina Gaslini - Teaching Hospital	SAMN02851644	GCA_000705515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/705/515/GCA_000705515.1_SA10	-	SA10
Salmonella enterica subsp. enterica serovar Amsterdam	593904	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89099	52.2	-	MXVZ01	85	4973	4716	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368756	GCA_002062115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/115/GCA_002062115.1_ASM206211v1	-	BCW_2891
Escherichia coli EPEC 32/73	766165	PRJNA49111	49111	Proteobacteria	Gammaproteobacteria	5.12454	50.7	-	LAFA01	71	5515	4882	3/8/17	3/15/17	Contig	Institute for Genome Sciences	SAMN00017230	GCA_002024105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/024/105/GCA_002024105.1_ASM202410v1	26238712	EPEC 32/73
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28985	65.3	-	CNBR01	178	4307	3984	3/23/15	3/12/17	Scaffold	SC	SAMEA961578	GCA_001396335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/335/GCA_001396335.1_6174_2_11	-	Bir 72
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.05459	39.6	-	CMMP01	59	2231	1988	3/23/15	3/11/17	Scaffold	SC	SAMEA1029178	GCA_001165805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/805/GCA_001165805.1_7068_4_18	-	SMRU3138
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.06904	39.9	-	CPLT01	113	2203	2040	3/23/15	3/10/17	Scaffold	SC	SAMEA682594	GCA_001165885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/885/GCA_001165885.1_5392_7_12	-	08B02857
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.35247	65.4	-	CNAT01	183	4298	3999	3/22/15	3/12/17	Scaffold	SC	SAMEA961579	GCA_001396355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/355/GCA_001396355.1_5237_3_5	-	BIR-13
Escherichia coli O157:H7	83334	PRJNA273513	273513	Proteobacteria	Gammaproteobacteria	5.32561	50.2874	plasmid p_IncFIA:NZ_CM007785.1/CM007785.1; plasmid p_IncFIB:NZ_CM007786.1/CM007786.1; plasmid p_IncFII:NZ_CM007787.1/CM007787.1	MWVK01	169	5757	5304	3/15/17	3/17/17	Contig	McGill University and Genome Quebec Innovation Centre	SAMN06349171	GCA_002027605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/605/GCA_002027605.1_ASM202760v1	-	LEN02-0647-1
Salmonella enterica subsp. enterica serovar Senftenberg	28150	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.96233	52	-	MXVX01	270	5180	4801	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368758	GCA_002062125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/125/GCA_002062125.1_ASM206212v1	-	BCW_2893
Staphylococcus aureus SA9-LAU	1429879	PRJNA229931	229931	Terrabacteria group	Firmicutes	2.86031	32.8	-	JHEA01	27	2998	2831	6/12/14	3/4/17	Contig	Lebanese American University	SAMN02851474	GCA_000708385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/385/GCA_000708385.1_Staphylococcus_aureus_SA9-LAU_WGS	-	SA9-LAU
Staphylococcus aureus SA10-LAU	1429880	PRJNA229932	229932	Terrabacteria group	Firmicutes	2.81486	32.8	-	JHEB01	68	2912	2718	6/12/14	3/3/17	Contig	Lebanese American University	SAMN02851473	GCA_000708405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/405/GCA_000708405.1_Staphylococcus_aureus_SA10-LAU_WGS	-	SA10-LAU
Salmonella enterica subsp. enterica serovar Kedougou	358771	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.67045	52	-	MXVW01	1527	5265	4270	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368759	GCA_002062135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/135/GCA_002062135.1_ASM206213v1	-	BCW_2894
Escherichia coli O157:H7	83334	PRJNA273513	273513	Proteobacteria	Gammaproteobacteria	5.32688	50.2602	plasmid p_IncFIA:NZ_CM007788.1/CM007788.1; plasmid p_IncFIB:NZ_CM007789.1/CM007789.1; plasmid p_IncFII:NZ_CM007790.1/CM007790.1	MWVL01	174	5761	5312	3/15/17	3/17/17	Contig	McGill University and Genome Quebec Innovation Centre	SAMN06349172	GCA_002027645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/645/GCA_002027645.1_ASM202764v1	-	LEN02-9121-1
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.3061	65.4	-	CNAP01	230	4310	4051	3/23/15	3/12/17	Scaffold	SC	SAMEA961581	GCA_001396375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/375/GCA_001396375.1_5237_2_7	-	BIR-07
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.0818	39.5	-	CLJW01	41	2295	2070	3/21/15	3/10/17	Scaffold	SC	SAMEA1028768	GCA_001165925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/925/GCA_001165925.1_6925_8_20	-	SMRU2540
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.06253	39.6	-	CMCE01	63	2238	2000	3/21/15	3/10/17	Scaffold	SC	SAMEA1029381	GCA_001165945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/945/GCA_001165945.1_7004_8_76	-	SMRU2908
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.34379	65.5	-	CNAS01	175	4319	4070	3/23/15	3/12/17	Scaffold	SC	SAMEA961582	GCA_001396395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/395/GCA_001396395.1_5237_2_6	-	BIR-06
Escherichia coli O157:H7	83334	PRJNA273513	273513	Proteobacteria	Gammaproteobacteria	5.32533	50.2589	plasmid p_IncFIA:NZ_CM007791.1/CM007791.1; plasmid p_IncFIB:NZ_CM007792.1/CM007792.1; plasmid p_IncFII:NZ_CM007793.1/CM007793.1	MWVM01	176	5757	5302	3/15/17	3/17/17	Contig	McGill University and Genome Quebec Innovation Centre	SAMN06349173	GCA_002027685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/027/685/GCA_002027685.1_ASM202768v1	-	LEN03-5497-2
Salmonella enterica subsp. enterica serovar Muenster	82689	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69385	52.1	-	MXWB01	43	4749	4499	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368754	GCA_002062165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/165/GCA_002062165.1_ASM206216v1	-	BCW_2889
Staphylococcus aureus SA11-LAU	1429881	PRJNA229933	229933	Terrabacteria group	Firmicutes	2.82623	32.8	-	JHEC01	51	2977	2777	6/12/14	3/3/17	Contig	Lebanese American University	SAMN02851471	GCA_000708425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/425/GCA_000708425.1_Staphylococcus_aureus_SA11-LAU_WGS	-	SA11-LAU
Staphylococcus aureus SA12-LAU	1429882	PRJNA229934	229934	Terrabacteria group	Firmicutes	2.811	32.7	-	JHED01	28	2939	2763	6/12/14	3/3/17	Contig	Lebanese American University	SAMN02851475	GCA_000708445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/708/445/GCA_000708445.1_Staphylococcus_aureus_SA12-LAU_WGS	-	SA12-LAU
Salmonella enterica subsp. enterica serovar Albany	211968	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80004	52.1	-	MXWC01	67	4842	4614	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368753	GCA_002062195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/195/GCA_002062195.1_ASM206219v1	-	BCW_2888
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.30295	50.7	-	MDFO01	41	5597	5196	3/15/17	3/17/17	Contig	Santa Clara University	SAMN05525568	GCA_002028665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/665/GCA_002028665.1_ASM202866v1	-	SF-001
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.34964	65.5	-	CNAM01	179	4339	4088	3/23/15	3/12/17	Scaffold	SC	SAMEA961583	GCA_001396415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/415/GCA_001396415.1_5237_2_5	-	BIR-05
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.17435	39.6	-	CPRO01	213	2344	2140	3/23/15	3/10/17	Scaffold	SC	SAMEA682557	GCA_001165985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/985/GCA_001165985.1_5392_7_4	-	spnIC419
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.18018	39.5	-	CKBH01	69	2433	2184	3/21/15	3/10/17	Scaffold	SC	SAMEA974614	GCA_001166065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/065/GCA_001166065.1_6259_7_6	-	33D
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32622	65.4	-	CNAR01	228	4322	4040	3/22/15	3/12/17	Scaffold	SC	SAMEA961584	GCA_001396435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/435/GCA_001396435.1_5237_2_4	-	BIR-04
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.15493	50.6	-	MDFP01	45	5436	5071	3/15/17	3/17/17	Contig	Santa Clara University	SAMN05525593	GCA_002028705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/705/GCA_002028705.1_ASM202870v1	-	SF-083
Salmonella enterica subsp. enterica serovar Muenster	82689	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69658	52.1	-	MXWF01	119	4814	4506	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368749	GCA_002062205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/205/GCA_002062205.1_ASM206220v1	-	BCW_2884
Staphylococcus aureus LysK 1 2011	1448851	PRJNA235869	235869	Terrabacteria group	Firmicutes	2.86312	32.8	-	JOPW01	75	3050	2889	6/27/14	3/3/17	Contig	IGS	SAMN02666771	GCA_000712655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/655/GCA_000712655.1_psaLysK111	-	LysK 1 2011
Staphylococcus aureus LysK 2 2011	1448852	PRJNA235870	235870	Terrabacteria group	Firmicutes	2.86363	32.8	-	JOPX01	73	3049	2876	6/27/14	3/4/17	Contig	IGS	SAMN02666773	GCA_000712665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/665/GCA_000712665.1_psaLysK211	-	LysK 2 2011
Salmonella enterica subsp. enterica serovar Indiana	286783	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.95492	51.8	-	MXWI01	93	5043	4773	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368746	GCA_002062235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/235/GCA_002062235.1_ASM206223v1	-	BCW_2881
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.22855	50.6	-	MDFQ01	42	5527	5157	3/15/17	3/17/17	Contig	Santa Clara University	SAMN05525636	GCA_002028715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/715/GCA_002028715.1_ASM202871v1	-	SF-075
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30933	65.4	-	CNAW01	297	4307	3966	3/22/15	3/13/17	Scaffold	SC	SAMEA961585	GCA_001396455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/455/GCA_001396455.1_5237_3_3	-	BIR-11
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12841	39.6	-	CQZJ01	74	2345	2115	3/23/15	3/11/17	Scaffold	SC	SAMEA1024961	GCA_001166105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/105/GCA_001166105.1_6730_5_11	-	SMRU659
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12895	39.4	-	CKXU01	55	2323	2089	3/21/15	3/10/17	Scaffold	SC	SAMEA1026251	GCA_001166145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/145/GCA_001166145.1_6823_7_12	-	SMRU2004
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29915	65.3	-	CNAU01	333	4343	3990	3/23/15	3/12/17	Scaffold	SC	SAMEA961586	GCA_001396475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/475/GCA_001396475.1_5237_3_2	-	BIR-10
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.25265	50.7	-	MDFR01	50	5558	5126	3/15/17	3/17/17	Contig	Santa Clara University	SAMN05525794	GCA_002028745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/745/GCA_002028745.1_ASM202874v1	-	SF-149
Salmonella enterica subsp. enterica serovar Blockley	57741	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.00023	51.6	-	MXWJ01	591	4951	4715	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368745	GCA_002062245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/245/GCA_002062245.1_ASM206224v1	-	BCW_2880
Staphylococcus aureus 1101-1 2011	1448853	PRJNA235871	235871	Terrabacteria group	Firmicutes	2.86179	32.8	-	JOPY01	71	3045	2873	6/27/14	3/3/17	Contig	IGS	SAMN02666747	GCA_000712675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/675/GCA_000712675.1_psa1101111	-	1101-1 2011
Staphylococcus aureus 1101-2 2011	1448854	PRJNA235872	235872	Terrabacteria group	Firmicutes	2.87116	32.9	-	JOPZ01	56	3031	2870	6/27/14	3/4/17	Contig	IGS	SAMN02666750	GCA_000712685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/685/GCA_000712685.1_psa1101211	-	1101-2 2011
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.79954	52.1	-	MXWM01	368	5095	4624	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368742	GCA_002062265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/265/GCA_002062265.1_ASM206226v1	-	BCW_2877
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.09343	50.7	-	MDFS01	48	5357	4949	3/15/17	3/17/17	Contig	Santa Clara University	SAMN05545166	GCA_002028755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/755/GCA_002028755.1_ASM202875v1	-	SF-151
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.2999	65.4	-	CNAX01	301	4311	3972	3/23/15	3/12/17	Scaffold	SC	SAMEA961587	GCA_001396495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/495/GCA_001396495.1_5237_3_1	-	BIR-09
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05053	39.7	-	CLZU01	62	2241	2032	3/21/15	3/10/17	Scaffold	SC	SAMEA1029062	GCA_001166185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/185/GCA_001166185.1_7004_5_1	-	SMRU2857
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.13658	39.5	-	CMIA01	75	2363	2113	3/23/15	3/10/17	Scaffold	SC	SAMEA1029182	GCA_001166225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/225/GCA_001166225.1_7038_6_20	-	SMRU2996
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30258	65.4	-	CNAL01	217	4311	4051	3/23/15	3/12/17	Scaffold	SC	SAMEA961588	GCA_001396515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/515/GCA_001396515.1_5237_2_8	-	BIR-08
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.02698	50.5	-	MDFU01	42	5264	4872	3/15/17	3/17/17	Contig	Santa Clara University	SAMN05545186	GCA_002028785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/785/GCA_002028785.1_ASM202878v1	-	SF-239
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.77267	52.2	-	MXWN01	83	4899	4645	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368741	GCA_002062295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/295/GCA_002062295.1_ASM206229v1	-	BCW_2876
Staphylococcus aureus Lyso 2 2010	1448842	PRJNA235860	235860	Terrabacteria group	Firmicutes	2.89743	32.9	-	JOPN01	75	3094	2913	6/27/14	3/3/17	Contig	IGS	SAMN02666776	GCA_000712735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/735/GCA_000712735.1_psaLyso210	-	Lyso 2 2010
Staphylococcus aureus 1801-1 2011	1448855	PRJNA235873	235873	Terrabacteria group	Firmicutes	2.85956	32.8	-	JOQA01	74	3039	2890	6/27/14	3/3/17	Contig	IGS	SAMN02666752	GCA_000712745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/745/GCA_000712745.1_psa1801111	-	1801-1 2011
Salmonella enterica subsp. enterica serovar Oranienburg	28147	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.51087	52.3	-	MXWO01	55	4561	4320	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368740	GCA_002062305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/305/GCA_002062305.1_ASM206230v1	-	BCW_2875
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.16487	50.7	-	MDFV01	29	5442	5084	3/15/17	3/24/17	Contig	Santa Clara University	SAMN05545191	GCA_002028795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/795/GCA_002028795.1_ASM202879v1	-	SF-264
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32141	65.4	-	CNCA01	169	4301	4009	3/23/15	3/12/17	Scaffold	SC	SAMEA961589	GCA_001396535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/535/GCA_001396535.1_6174_6_9	-	Bir 82
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.0319	39.7	-	CPQX01	64	2213	2017	3/23/15	3/11/17	Scaffold	SC	SAMEA682288	GCA_001166265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/265/GCA_001166265.1_5381_2_3	-	09B03716
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12393	39.5	-	CMDO01	46	2326	2072	3/21/15	3/11/17	Scaffold	SC	SAMEA1028657	GCA_001166305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/305/GCA_001166305.1_7011_3_8	-	SMRU2744
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29239	65.4	-	CNBY01	155	4290	3991	3/23/15	3/12/17	Scaffold	SC	SAMEA961591	GCA_001396555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/555/GCA_001396555.1_6174_6_3	-	Bir 76
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.27998	50.6	-	MDFX01	50	5592	5181	3/15/17	3/17/17	Contig	Santa Clara University	SAMN05545219	GCA_002028825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/825/GCA_002028825.1_ASM202882v1	-	SF-305
Salmonella enterica subsp. enterica serovar Poona	436295	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.64635	52.2	-	MXWP01	68	4689	4438	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368738	GCA_002062335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/335/GCA_002062335.1_ASM206233v1	-	BCW_2873
Staphylococcus aureus LysK 1 2010	1448843	PRJNA235861	235861	Terrabacteria group	Firmicutes	2.84117	32.8	-	JOPO01	47	3030	2874	6/27/14	3/3/17	Contig	IGS	SAMN02666755	GCA_000712755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/755/GCA_000712755.1_psalysK110	-	LysK 1 2010
Staphylococcus aureus LysK 2 2010	1448844	PRJNA235862	235862	Terrabacteria group	Firmicutes	2.84152	32.8	-	JOPP01	74	3022	2854	6/27/14	3/3/17	Contig	IGS	SAMN02666772	GCA_000712765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/765/GCA_000712765.1_psalysK210	-	LysK 2 2010
Salmonella enterica subsp. enterica serovar Mbadaka	1967652	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.75285	52.2	-	MXWR01	37	4864	4610	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368736	GCA_002062345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/345/GCA_002062345.1_ASM206234v1	-	BCW_2871
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.36103	50.6	-	MDFW01	60	5693	5259	3/15/17	3/17/17	Contig	Santa Clara University	SAMN05545218	GCA_002028835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/835/GCA_002028835.1_ASM202883v1	-	SF-269
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28829	65.3	-	CNBV01	226	4335	3988	3/22/15	3/12/17	Scaffold	SC	SAMEA961592	GCA_001396575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/575/GCA_001396575.1_6174_6_2	-	Bir 75
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.01554	39.6	-	CIMM01	44	2217	2000	3/21/15	3/11/17	Scaffold	SC	SAMEA1025271	GCA_001166385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/385/GCA_001166385.1_6710_7_14	-	SMRU1382
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.08294	39.8	-	CKOE01	51	2321	2101	3/21/15	3/11/17	Scaffold	SC	SAMEA1024042	GCA_001166425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/425/GCA_001166425.1_6673_8_12	-	SMRU252
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.2956	65.3	-	CNBP01	148	4299	3989	3/23/15	3/13/17	Scaffold	SC	SAMEA961593	GCA_001396595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/595/GCA_001396595.1_6174_6_1	-	Bir 74
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.159	50.6	-	MDFY01	24	5422	5072	3/15/17	3/17/17	Contig	Santa Clara University	SAMN05552908	GCA_002028865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/865/GCA_002028865.1_ASM202886v1	-	SF-313
Salmonella enterica subsp. enterica serovar Livingstone	260680	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.87559	51.9	-	MXWT01	147	4999	4676	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368734	GCA_002062375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/375/GCA_002062375.1_ASM206237v1	-	BCW_2869
Staphylococcus aureus 1101-1 2010	1448845	PRJNA235863	235863	Terrabacteria group	Firmicutes	2.84298	32.8	-	JOPQ01	63	3025	2861	6/27/14	3/3/17	Contig	IGS	SAMN02666748	GCA_000712815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/815/GCA_000712815.1_psa110110	-	1101-1 2010
Staphylococcus aureus Lyso 1 2010	1448841	PRJNA235859	235859	Terrabacteria group	Firmicutes	2.86281	32.9	-	JOPM01	88	3009	2871	6/27/14	3/4/17	Contig	IGS	SAMN02666774	GCA_000712825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/825/GCA_000712825.1_psalyso110	-	Lyso 1 2010
Salmonella enterica subsp. enterica serovar Montevideo	115981	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.74464	52.1	-	MXWS01	1507	5433	4405	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368735	GCA_002062385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/385/GCA_002062385.1_ASM206238v1	-	BCW_2870
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.30449	50.6	-	MDFZ01	42	5629	5255	3/15/17	3/17/17	Contig	Santa Clara University	SAMN05552972	GCA_002028875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/875/GCA_002028875.1_ASM202887v1	-	SF-335
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29043	65.4	-	CNBQ01	148	4291	3975	3/23/15	3/12/17	Scaffold	SC	SAMEA961594	GCA_001396615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/615/GCA_001396615.1_6174_2_12	-	Bir 73
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.19347	39.5	-	CMJK01	46	2429	2192	3/22/15	3/14/17	Scaffold	SC	SAMEA1025722	GCA_001166465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/465/GCA_001166465.1_7038_8_30	-	SMRU2238
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.01227	39.8	-	CLSA01	59	2211	2015	3/21/15	3/4/17	Scaffold	SC	SAMEA1028767	GCA_001166645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/645/GCA_001166645.1_6972_3_18	-	SMRU2586
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.34317	65.5	-	CNCC01	128	4307	3998	3/23/15	3/12/17	Scaffold	SC	SAMEA961596	GCA_001396635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/635/GCA_001396635.1_6174_6_6	-	Bir 79
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.14793	50.6	-	MDGA01	25	5393	5047	3/15/17	4/10/17	Contig	Santa Clara University	SAMN05552973	GCA_002028905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/905/GCA_002028905.1_ASM202890v1	-	SF-356
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.79113	52.2	-	MXWX01	71	4893	4656	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358710	GCA_002062405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/405/GCA_002062405.1_ASM206240v1	-	BCW_2865
Staphylococcus aureus 1101-2 2010	1448846	PRJNA235864	235864	Terrabacteria group	Firmicutes	2.84624	32.8	-	JOPR01	54	3034	2867	6/27/14	3/3/17	Contig	IGS	SAMN02666749	GCA_000712835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/835/GCA_000712835.1_psa1101210	-	1101-2 2010
Staphylococcus aureus 1801-2 2011	1448856	PRJNA235874	235874	Terrabacteria group	Firmicutes	2.86354	32.8	-	JOQB01	77	3063	2890	6/27/14	3/4/17	Contig	IGS	SAMN02666754	GCA_000712845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/845/GCA_000712845.1_psa1801211	-	1801-2 2011
Salmonella enterica subsp. enterica serovar Concord	483687	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.95085	51.8	-	MXWU01	200	5103	4750	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368733	GCA_002062415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/415/GCA_002062415.1_ASM206241v1	-	BCW_2868
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.23294	50.7	-	MDGB01	57	5506	5081	3/15/17	3/17/17	Contig	Santa Clara University	SAMN05552975	GCA_002028915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/915/GCA_002028915.1_ASM202891v1	-	SF-362
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.34809	65.5	-	CNBX01	225	4324	3993	3/22/15	3/13/17	Scaffold	SC	SAMEA961597	GCA_001396655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/655/GCA_001396655.1_6174_6_5	-	Bir 78
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.17736	39.5	-	CPKF01	72	2401	2181	3/23/15	3/4/17	Scaffold	SC	SAMEA682566	GCA_001166685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/685/GCA_001166685.1_5392_6_7	-	spnIC178
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.27903	39.4	-	CRTF01	92	2527	2250	3/22/15	3/4/17	Scaffold	SC	SAMEA1025172	GCA_001166705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/705/GCA_001166705.1_6805_4_11	-	SMRU1667
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.3151	65.4	-	CNCB01	175	4326	3963	3/23/15	3/12/17	Scaffold	SC	SAMEA961598	GCA_001396675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/675/GCA_001396675.1_6174_6_4	-	Bir 77
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.30823	50.6	-	MDSF01	38	5584	5178	3/15/17	3/17/17	Contig	Santa Clara University	SAMN05545167	GCA_002028945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/945/GCA_002028945.1_ASM202894v1	-	SF-194
Salmonella enterica subsp. enterica serovar Rissen	399587	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.99523	52	-	MXWY01	115	5137	4824	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368730	GCA_002062455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/455/GCA_002062455.1_ASM206245v1	-	BCW_2864
Staphylococcus aureus 1801-1 2010	1448847	PRJNA235865	235865	Terrabacteria group	Firmicutes	2.91123	33.1	-	JOPS01	157	2932	2769	6/27/14	3/4/17	Contig	IGS	SAMN02666751	GCA_000712895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/895/GCA_000712895.1_psa1801110	-	1801-1 2010
Staphylococcus aureus 1801-2 2010	1448848	PRJNA235866	235866	Terrabacteria group	Firmicutes	2.86337	32.8	-	JOPT01	60	3060	2890	6/27/14	3/3/17	Contig	IGS	SAMN02666753	GCA_000712905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/712/905/GCA_000712905.1_psa1801210	-	1801-2 2010
Salmonella enterica subsp. enterica serovar Chester	149386	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.62378	52.2	-	MXXE01	580	5000	4395	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368723	GCA_002062475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/475/GCA_002062475.1_ASM206247v1	-	BCW_2857
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.22776	50.6	-	MDGC01	49	5503	5084	3/15/17	3/17/17	Contig	Santa Clara University	SAMN05559631	GCA_002028955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/955/GCA_002028955.1_ASM202895v1	-	SF-094
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32138	65.5	-	CNDY01	157	4309	3972	3/23/15	3/12/17	Scaffold	SC	SAMEA961600	GCA_001396695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/695/GCA_001396695.1_6280_4_5	-	Bir 114
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.15123	39.6	-	CMBM01	64	2378	2106	3/21/15	3/4/17	Scaffold	SC	SAMEA1029336	GCA_001166785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/785/GCA_001166785.1_7004_7_49	-	SMRU2881
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07659	39.6	-	CKDL01	106	2265	2006	3/21/15	3/5/17	Scaffold	SC	SAMEA1023978	GCA_001166805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/805/GCA_001166805.1_6630_1_13	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.3309	65.5	-	CNDZ01	127	4298	4010	3/23/15	3/13/17	Scaffold	SC	SAMEA961601	GCA_001396715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/715/GCA_001396715.1_6280_4_6	-	Bir 115
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.19712	50.6	-	MDFT01	26	5473	5114	3/15/17	3/17/17	Contig	Santa Clara University	SAMN05545168	GCA_002028965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/965/GCA_002028965.1_ASM202896v1	-	SF-231
Salmonella enterica subsp. enterica serovar Virchow	48409	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.94911	51.8	-	MXWZ01	284	5132	4741	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368729	GCA_002062485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/485/GCA_002062485.1_ASM206248v1	-	BCW_2863
Staphylococcus aureus subsp. aureus	46170	PRJEB4980	255151	Terrabacteria group	Firmicutes	2.84074	32.8	-	CBYC01	180	2965	2802	7/14/14	3/4/17	Contig	IFH_MS	SAMEA3139067	GCA_000731195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/195/GCA_000731195.1_MRSA_E1_CLCBio_denovo	24759713	MRSA_E1
Staphylococcus aureus subsp. aureus	46170	PRJEB5449	255162	Terrabacteria group	Firmicutes	2.83282	32.7	-	CBZE01	118	2948	2797	7/11/14	3/4/17	Contig	IFH_MS	SAMEA3139068	GCA_000731215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/215/GCA_000731215.1_MRSA_P11_CLCBio_denovo	24759713	MRSA_P11
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.05833	52.1	-	MXXF01	94	5229	4956	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368722	GCA_002062495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/495/GCA_002062495.1_ASM206249v1	-	BCW_2856
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.06589	50.7	-	MDGD01	57	5312	4911	3/15/17	3/17/17	Contig	Santa Clara University	SAMN05560411	GCA_002029005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/005/GCA_002029005.1_ASM202900v1	-	SF-371
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30319	65.4	-	CNEC01	172	4306	4009	3/23/15	3/12/17	Scaffold	SC	SAMEA961602	GCA_001396735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/735/GCA_001396735.1_6280_4_7	-	Bir 116
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.11829	39.6	-	CLNJ01	57	2358	2118	3/21/15	3/4/17	Scaffold	SC	SAMEA1028930	GCA_001166825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/825/GCA_001166825.1_6938_8_16	-	SMRU2728
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08454	39.6	-	CMAF01	53	2302	2069	3/21/15	3/4/17	Scaffold	SC	SAMEA1028648	GCA_001166885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/885/GCA_001166885.1_7004_5_4	-	SMRU2860
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29454	65.3	-	CNDW01	171	4305	3981	3/22/15	3/12/17	Scaffold	SC	SAMEA961605	GCA_001396755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/755/GCA_001396755.1_6280_4_10	-	Bir 119
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.21424	50.6	-	MDGE01	32	5500	5144	3/15/17	3/17/17	Contig	Santa Clara University	SAMN05560412	GCA_002029015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/015/GCA_002029015.1_ASM202901v1	-	SF-380
Salmonella enterica subsp. enterica serovar Corvallis	593905	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.71983	52.1	-	MXXG01	183	4834	4495	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368721	GCA_002062535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/535/GCA_002062535.1_ASM206253v1	-	BCW_2855
Staphylococcus aureus subsp. aureus	46170	PRJEB5445	255158	Terrabacteria group	Firmicutes	2.80834	32.8	-	CBZA01	101	2905	2778	7/11/14	3/4/17	Contig	IFH_MS	SAMEA3139069	GCA_000731235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/235/GCA_000731235.1_MRSA_P7_CLCBio_denovo	24759713	MRSA_P7
Staphylococcus aureus subsp. aureus	46170	PRJEB5441	255154	Terrabacteria group	Firmicutes	2.8175	32.8	-	CBYU01	203	2983	2773	7/14/14	3/4/17	Contig	IFH_MS	SAMEA3139070	GCA_000731255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/255/GCA_000731255.1_MRSA_P3_CLCBio_denovo	24759713	MRSA_P3
Salmonella enterica subsp. enterica serovar Give	46626	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66273	52.2	-	MXXI01	383	4892	4458	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368719	GCA_002062555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/555/GCA_002062555.1_ASM206255v1	-	BCW_2853
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.14307	50.6	-	MDGG01	29	5397	5054	3/15/17	3/17/17	Contig	Santa Clara University	SAMN05560416	GCA_002029025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/025/GCA_002029025.1_ASM202902v1	-	SF-403
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30356	65.4	-	CNDX01	193	4313	4010	3/23/15	3/12/17	Scaffold	SC	SAMEA961606	GCA_001396775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/775/GCA_001396775.1_6280_4_11	-	Bir 120
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08536	39.7	-	CQYC01	352	2378	1931	3/23/15	3/15/17	Scaffold	SC	SAMEA1024547	GCA_001167025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/025/GCA_001167025.1_6730_3_18	-	SMRU618
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.20874	39.4	-	CLCJ01	94	2434	2192	3/21/15	3/10/17	Scaffold	SC	SAMEA1025900	GCA_001167205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/205/GCA_001167205.1_6899_4_10	-	SMRU2026
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33149	65.5	-	CNDU01	147	4316	4001	3/23/15	3/12/17	Scaffold	SC	SAMEA961607	GCA_001396795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/795/GCA_001396795.1_6280_4_12	-	Bir 121
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.16009	50.5	-	MDGF01	29	5419	5079	3/15/17	3/17/17	Contig	Santa Clara University	SAMN05560413	GCA_002029035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/035/GCA_002029035.1_ASM202903v1	-	SF-383
Salmonella enterica subsp. enterica serovar Braenddrup	1967644	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80753	52.2	-	MXXH01	362	5065	4626	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368720	GCA_002062565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/565/GCA_002062565.1_ASM206256v1	-	BCW_2854
Staphylococcus aureus subsp. aureus	46170	PRJEB5457	255168	Terrabacteria group	Firmicutes	2.84074	32.8	-	CBYW01	180	2965	2802	7/13/14	3/4/17	Contig	IFH_MS	SAMEA3139071	GCA_000731275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/275/GCA_000731275.1_MRSA_P1_CLCBio_denovo	24759713	MRSA_P1
Staphylococcus aureus subsp. aureus	46170	PRJEB5451	255164	Terrabacteria group	Firmicutes	2.84486	32.7	-	CBZF01	119	2960	2827	7/11/14	3/4/17	Contig	IFH_MS	SAMEA3139074	GCA_000731335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/335/GCA_000731335.1_MRSA_P13_CLCBio_denovo	24759713	MRSA_P13
Salmonella enterica subsp. enterica serovar Singapore	487002	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80339	52.2	-	MXXJ01	92	4901	4650	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368718	GCA_002062575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/575/GCA_002062575.1_ASM206257v1	-	BCW_2852
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.21019	50.5	-	MDGH01	35	5499	5142	3/15/17	3/17/17	Contig	Santa Clara University	SAMN05560418	GCA_002029085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/085/GCA_002029085.1_ASM202908v1	-	SF-421
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33025	65.4	-	CNAQ01	241	4341	4022	3/23/15	3/13/17	Scaffold	SC	SAMEA961609	GCA_001396815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/815/GCA_001396815.1_5237_2_3	-	BIR-03
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.0594	39.5	-	CLXO01	52	2242	2003	3/21/15	3/14/17	Scaffold	SC	SAMEA1029142	GCA_001167325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/325/GCA_001167325.1_6983_6_30	-	SMRU2334
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.06222	39.6	-	CLEY01	58	2281	2041	3/21/15	3/10/17	Scaffold	SC	SAMEA1025814	GCA_001167385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/385/GCA_001167385.1_6899_7_1	-	SMRU2089
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33702	65.5	-	CNCI01	138	4290	4003	3/22/15	3/12/17	Scaffold	SC	SAMEA961611	GCA_001396835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/835/GCA_001396835.1_6174_8_6	-	Bir 91
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.09176	50.6	-	MDGJ01	29	5296	4964	3/15/17	3/17/17	Contig	Santa Clara University	SAMN05560421	GCA_002029095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/095/GCA_002029095.1_ASM202909v1	-	SF-423
Salmonella enterica subsp. enterica serovar Vinobrady	1967659	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.91838	52.2	-	MXXK01	63	5024	4742	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368717	GCA_002062615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/615/GCA_002062615.1_ASM206261v1	-	BCW_2851
Staphylococcus aureus subsp. aureus	46170	PRJEB5443	255156	Terrabacteria group	Firmicutes	2.80968	32.7	-	CBYZ01	99	2934	2782	7/11/14	3/4/17	Contig	IFH_MS	SAMEA3139076	GCA_000731375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/375/GCA_000731375.1_MRSA_P5_CLCBio_denovo	24759713	MRSA_P5
Staphylococcus aureus subsp. aureus	46170	PRJEB5456	255167	Terrabacteria group	Firmicutes	2.8134	32.7	-	CBZJ01	113	2916	2785	7/11/14	3/4/17	Contig	IFH_MS	SAMEA3139077	GCA_000731395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/395/GCA_000731395.1_MRSA_S3_CLCBio_denovo	24759713	MRSA_S3
Salmonella enterica subsp. enterica serovar Panama	29472	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.87882	51.9	-	MXXN01	178	5018	4687	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368714	GCA_002062625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/625/GCA_002062625.1_ASM206262v1	-	BCW_2848
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.20843	50.6	-	MDGI01	46	5514	5146	3/15/17	3/17/17	Contig	Santa Clara University	SAMN05560448	GCA_002029115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/115/GCA_002029115.1_ASM202911v1	-	SF-425
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29056	65.4	-	CNCL01	151	4291	4003	3/22/15	3/13/17	Scaffold	SC	SAMEA961612	GCA_001396855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/855/GCA_001396855.1_6174_8_7	-	Bir 92
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.20965	39.6	-	CLPX01	66	2463	2231	3/21/15	3/11/17	Scaffold	SC	SAMEA1028613	GCA_001167425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/425/GCA_001167425.1_6949_4_19	-	SMRU2491
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.07268	39.7	-	CLVG01	38	2287	2077	3/21/15	3/10/17	Scaffold	SC	SAMEA1025975	GCA_001167445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/445/GCA_001167445.1_6983_3_53	-	SMRU2261
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.27557	65.3	-	CNCG01	206	4337	4014	3/23/15	3/13/17	Scaffold	SC	SAMEA961613	GCA_001396875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/875/GCA_001396875.1_6174_8_2	-	Bir 87
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.20839	50.6	-	MDSE01	57	5496	5076	3/15/17	3/17/17	Contig	Santa Clara University	SAMN05561036	GCA_002029145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/145/GCA_002029145.1_ASM202914v1	-	-
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.95487	52.2	-	MXXQ01	98	5107	4832	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368711	GCA_002062655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/655/GCA_002062655.1_ASM206265v1	-	BCW_2845
Staphylococcus aureus subsp. aureus	46170	PRJEB5442	255155	Terrabacteria group	Firmicutes	2.81217	32.8	-	CBYV01	176	2935	2760	7/11/14	3/4/17	Contig	IFH_MS	SAMEA3139078	GCA_000731415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/415/GCA_000731415.1_MRSA_P4_CLCBio_denovo	24759713	MRSA_P4
Staphylococcus aureus subsp. aureus	46170	PRJEB5452	255165	Terrabacteria group	Firmicutes	2.81362	32.8	-	CBZG01	108	2933	2780	7/11/14	3/4/17	Contig	IFH_MS	SAMEA3139079	GCA_000731435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/435/GCA_000731435.1_MRSA_P14_CLCBio_denovo	24759713	MRSA_P14
Salmonella enterica subsp. enterica serovar Montevideo	115981	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7021	52.2	-	MXXP01	313	4920	4522	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368712	GCA_002062665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/665/GCA_002062665.1_ASM206266v1	-	BCW_2846
Escherichia coli	562	PRJNA294467	294467	Proteobacteria	Gammaproteobacteria	5.14412	50.6	-	MDSG01	32	5401	5049	3/15/17	3/17/17	Contig	Santa Clara University	SAMN05561034	GCA_002029165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/165/GCA_002029165.1_ASM202916v1	-	-
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29102	65.3	-	CNCE01	167	4301	3991	3/23/15	3/12/17	Scaffold	SC	SAMEA961614	GCA_001396895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/895/GCA_001396895.1_6174_8_3	-	Bir 88
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.18165	39.6	-	CKLV01	143	2410	2127	3/21/15	3/14/17	Scaffold	SC	SAMEA1024105	GCA_001167485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/485/GCA_001167485.1_6641_6_8	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10584	39.7	-	CKMU01	75	2270	1968	3/21/15	3/10/17	Scaffold	SC	SAMEA1023720	GCA_001167505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/505/GCA_001167505.1_6649_8_14	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28063	65.4	-	CNCJ01	180	4292	4001	3/23/15	3/12/17	Scaffold	SC	SAMEA961616	GCA_001396935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/935/GCA_001396935.1_6174_8_5	-	Bir 90
Escherichia coli	562	PRJNA276118	276118	Proteobacteria	Gammaproteobacteria	5.10461	50.9	-	JZXF01	325	5508	5004	3/30/17	4/3/17	Contig	"University of Maryland, School of Medicine"	SAMN03366548	GCA_002075125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/125/GCA_002075125.1_103334	-	103334
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.82807	52.1	-	MXXR01	68	4983	4713	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368710	GCA_002062685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/685/GCA_002062685.1_ASM206268v1	-	BCW_2844
Staphylococcus aureus subsp. aureus	46170	PRJEB5450	255163	Terrabacteria group	Firmicutes	2.84371	32.8	-	CBZD01	170	2966	2811	7/14/14	3/4/17	Contig	IFH_MS	SAMEA3139081	GCA_000731475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/475/GCA_000731475.1_MRSA_P12_CLCBio_denovo	24759713	MRSA_P12
Staphylococcus aureus subsp. aureus	46170	PRJEB5447	255160	Terrabacteria group	Firmicutes	2.83719	32.7	-	CBZC01	95	2940	2808	7/11/14	3/4/17	Contig	IFH_MS	SAMEA3139082	GCA_000731495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/495/GCA_000731495.1_MRSA_P9_CLCBio_denovo	24759713	MRSA_P9
Salmonella enterica subsp. enterica serovar Manhatten	1967651	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.61939	52.2	-	MXXS01	155	4702	4425	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368709	GCA_002062715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/715/GCA_002062715.1_ASM206271v1	-	BCW_2843
Escherichia coli	562	PRJNA276126	276126	Proteobacteria	Gammaproteobacteria	5.0585	50.5	-	JZXM01	105	5392	5015	3/30/17	4/3/17	Contig	"University of Maryland, School of Medicine"	SAMN03366555	GCA_002075135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/135/GCA_002075135.1_300757	-	300757
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30283	65.4	-	CNBU01	176	4291	3987	3/23/15	3/13/17	Scaffold	SC	SAMEA961617	GCA_001396955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/955/GCA_001396955.1_6174_6_10	-	Bir 83
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.37203	39.9	-	CKXJ01	73	2578	2333	3/21/15	3/11/17	Scaffold	SC	SAMEA1026218	GCA_001167525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/525/GCA_001167525.1_6823_6_8	-	SMRU1976
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12638	39.7	-	CMHD01	54	2366	2157	3/23/15	3/10/17	Scaffold	SC	SAMEA1029371	GCA_001167565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/565/GCA_001167565.1_7038_5_14	-	SMRU2966
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30759	65.3	-	CNBZ01	182	4321	3994	3/23/15	3/13/17	Scaffold	SC	SAMEA961618	GCA_001396975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/975/GCA_001396975.1_6174_6_11	-	Bir 84
Escherichia coli	562	PRJNA276123	276123	Proteobacteria	Gammaproteobacteria	5.00847	50.8	-	JZXJ01	227	5457	5010	3/30/17	4/3/17	Contig	"University of Maryland, School of Medicine"	SAMN03366552	GCA_002075165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/165/GCA_002075165.1_102667	-	102667
Salmonella enterica subsp. enterica serovar Weltenvreden	1967660	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.06296	52.1	-	MXXU01	158	5193	4881	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368706	GCA_002062735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/735/GCA_002062735.1_ASM206273v1	-	BCW_2840
Staphylococcus aureus subsp. aureus	46170	PRJEB5448	255161	Terrabacteria group	Firmicutes	2.81303	32.7	-	CBZB01	131	2917	2779	7/11/14	3/4/17	Contig	IFH_MS	SAMEA3139083	GCA_000731515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/515/GCA_000731515.1_MRSA_P10_CLCBio_denovo	24759713	MRSA_P10
Staphylococcus aureus subsp. aureus	46170	PRJEB5446	255159	Terrabacteria group	Firmicutes	2.81318	32.7	-	CBYY01	119	2907	2783	7/11/14	3/4/17	Contig	IFH_MS	SAMEA3139084	GCA_000731535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/535/GCA_000731535.1_MRSA_P8_CLCBio_denovo	24759713	MRSA_P8
Salmonella enterica subsp. enterica serovar Senftenberg	28150	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.37615	51.8	-	MXXT01	1109	5468	4995	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368707	GCA_002062745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/745/GCA_002062745.1_ASM206274v1	-	BCW_2841
Escherichia coli	562	PRJNA276120	276120	Proteobacteria	Gammaproteobacteria	5.18276	50.5	-	JZXH01	259	5635	5157	3/30/17	4/3/17	Contig	"University of Maryland, School of Medicine"	SAMN03366550	GCA_002075175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/175/GCA_002075175.1_102556	-	102556
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.36839	65.5	-	CNBW01	132	4316	4005	3/22/15	3/13/17	Scaffold	SC	SAMEA961619	GCA_001396995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/995/GCA_001396995.1_6174_6_12	-	Bir 85
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07101	39.5	-	CRFH01	58	2306	2061	3/22/15	3/10/17	Scaffold	SC	SAMEA1025609	GCA_001167705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/705/GCA_001167705.1_6736_4_12	-	SMRU1212
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.13822	39.3	-	CMPX01	145	2393	2154	3/23/15	3/11/17	Scaffold	SC	SAMEA2061730	GCA_001167745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/745/GCA_001167745.1_9803_7_75	-	10F
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28616	65.4	-	CNEA01	162	4302	3981	3/23/15	3/13/17	Scaffold	SC	SAMEA961621	GCA_001397015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/015/GCA_001397015.1_6280_4_3	-	Bir 112
Escherichia coli	562	PRJNA276117	276117	Proteobacteria	Gammaproteobacteria	4.77397	50.5	-	JZXE01	93	5077	4680	3/30/17	4/3/17	Contig	"University of Maryland, School of Medicine"	SAMN03366547	GCA_002075205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/205/GCA_002075205.1_102549	-	102549
Salmonella enterica subsp. enterica serovar Virchow	48409	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.78352	52.1	-	MXXW01	614	5200	4585	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368704	GCA_002062755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/755/GCA_002062755.1_ASM206275v1	-	BCW_2838
Staphylococcus aureus subsp. aureus	46170	PRJEB5455	255166	Terrabacteria group	Firmicutes	2.92642	33.3	-	CBZI01	262	3060	2885	7/14/14	3/4/17	Contig	IFH_MS	SAMEA3139085	GCA_000731555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/555/GCA_000731555.1_MRSA_S2_CLCBio_denovo	24759713	MRSA_S2
Staphylococcus aureus subsp. aureus	46170	PRJEB5440	255153	Terrabacteria group	Firmicutes	2.81576	32.8	-	CBYT01	139	2924	2768	7/11/14	3/4/17	Contig	IFH_MS	SAMEA3139086	GCA_000731575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/575/GCA_000731575.1_MRSA_P2_CLCBio_denovo	24759713	MRSA_P2
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.99009	52	-	MXXY01	222	5245	4903	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368702	GCA_002062795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/795/GCA_002062795.1_ASM206279v1	-	BCW_2836
Escherichia coli	562	PRJNA276119	276119	Proteobacteria	Gammaproteobacteria	5.04406	50.6	-	JZXG01	186	5355	4981	3/30/17	4/3/17	Contig	"University of Maryland, School of Medicine"	SAMN03366549	GCA_002075225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/225/GCA_002075225.1_102687	-	102687
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29693	65.4	-	CNCK01	150	4297	4026	3/23/15	3/12/17	Scaffold	SC	SAMEA961623	GCA_001397035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/035/GCA_001397035.1_6174_8_8	-	Bir 93
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.1174	39.5	-	CMHK01	59	2309	2058	3/23/15	3/11/17	Scaffold	SC	SAMEA1029451	GCA_001167845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/845/GCA_001167845.1_7038_5_9	-	SMRU2961
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.12357	39.7	-	CMTC01	70	2288	1988	3/22/15	3/10/17	Scaffold	SC	SAMEA1022853	GCA_001167905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/905/GCA_001167905.1_5737_1_4	-	356
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.3064	65.4	-	CNCF01	175	4324	4009	3/23/15	3/13/17	Scaffold	SC	SAMEA961624	GCA_001397055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/055/GCA_001397055.1_6174_8_11	-	Bir 96
Escherichia coli	562	PRJNA276122	276122	Proteobacteria	Gammaproteobacteria	5.23458	50.4	-	JZXI01	128	5646	5210	3/30/17	4/3/17	Contig	"University of Maryland, School of Medicine"	SAMN03366551	GCA_002075235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/235/GCA_002075235.1_103414	-	103414
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.68149	52.2	-	MXXX01	226	4809	4486	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368703	GCA_002062815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/815/GCA_002062815.1_ASM206281v1	-	BCW_2837
Staphylococcus aureus subsp. aureus	46170	PRJEB5444	255157	Terrabacteria group	Firmicutes	2.8154	32.8	-	CBYX01	111	2926	2795	7/13/14	3/4/17	Contig	IFH_MS	SAMEA3139087	GCA_000731595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/595/GCA_000731595.1_MRSA_P6_CLCBio_denovo	24759713	MRSA_P6
Staphylococcus aureus CUHK_BJ2002	1435360	PRJNA231228	231228	Terrabacteria group	Firmicutes	2.8894	32.7	-	AZMY01	89	3038	2901	7/23/14	3/4/17	Contig	The Chinese University of Hong Kong	SAMN02442047	GCA_000732805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/805/GCA_000732805.1_ASM73280v1	24969089	CUHK_BJ2002
Salmonella enterica subsp. enterica serovar Kohbu	1967649	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.71551	52.1	-	MXXZ01	292	4885	4514	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368701	GCA_002062825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/825/GCA_002062825.1_ASM206282v1	-	BCW_2835
Escherichia coli	562	PRJNA276124	276124	Proteobacteria	Gammaproteobacteria	5.25784	50.4	-	JZXK01	201	5725	5254	3/30/17	4/3/17	Contig	"University of Maryland, School of Medicine"	SAMN03366553	GCA_002075265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/265/GCA_002075265.1_102713	-	102713
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30558	65.4	-	CNCD01	184	4325	3991	3/23/15	3/13/17	Scaffold	SC	SAMEA961625	GCA_001397075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/075/GCA_001397075.1_6174_8_10	-	Bir 95
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.98702	39.8	-	CQRQ01	44	2195	1988	3/23/15	3/10/17	Scaffold	SC	SAMEA970215	GCA_001167925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/925/GCA_001167925.1_5159_8_6	-	BHN647
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.22812	39.4	-	CMFN01	87	2468	2212	3/21/15	3/11/17	Scaffold	SC	SAMEA1029037	GCA_001167945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/945/GCA_001167945.1_7011_6_9	-	SMRU2817
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31788	65.4	-	CNDJ01	183	4319	3978	3/23/15	3/13/17	Scaffold	SC	SAMEA961626	GCA_001397095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/095/GCA_001397095.1_6280_3_1	-	Bir 98
Escherichia coli	562	PRJNA276125	276125	Proteobacteria	Gammaproteobacteria	4.84308	50.5	-	JZXL01	173	5309	4874	3/30/17	4/3/17	Contig	"University of Maryland, School of Medicine"	SAMN03366554	GCA_002075295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/075/295/GCA_002075295.1_103604	-	103604
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7035	52.3	-	MXYA01	758	5111	4472	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368700	GCA_002062835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/835/GCA_002062835.1_ASM206283v1	-	BCW_2834
Staphylococcus aureus CUHK_BJ2007	1435361	PRJNA231229	231229	Terrabacteria group	Firmicutes	2.84231	32.7	-	AZMX01	81	2963	2826	7/23/14	3/4/17	Contig	The Chinese University of Hong Kong	SAMN02442048	GCA_000732815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/815/GCA_000732815.1_ASM73281v1	24969089	CUHK_BJ2007
Staphylococcus aureus CUHK_HK1997	1434321	PRJNA230895	230895	Terrabacteria group	Firmicutes	3.00848	32.7	-	AZJQ01	125	3196	3050	7/23/14	3/4/17	Contig	The Chinese University of Hong Kong	SAMN02438465	GCA_000732825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/825/GCA_000732825.1_ASM73282v1	24969089	CUHK_HK1997
Salmonella enterica subsp. enterica serovar Agona	58095	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89325	52	-	MXYC01	100	5001	4742	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368698	GCA_002062875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/875/GCA_002062875.1_ASM206287v1	-	BCW_2832
Escherichia coli	562	PRJNA352659	352659	Proteobacteria	Gammaproteobacteria	4.90739	50.5	-	NACX01	90	5147	4866	4/6/17	4/8/17	Contig	DTU	SAMN06562590	GCA_002080595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/595/GCA_002080595.1_ASM208059v1	-	5
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.37035	65.5	-	CNCH01	137	4340	4019	3/23/15	3/13/17	Scaffold	SC	SAMEA961627	GCA_001397115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/115/GCA_001397115.1_6174_8_12	-	Bir 97
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.03721	39.6	-	CRJZ01	70	2202	1971	3/23/15	3/10/17	Scaffold	SC	SAMEA1025618	GCA_001168025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/025/GCA_001168025.1_6753_3_15	-	SMRU1527
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.16725	39.5	-	CRIZ01	70	2369	2141	3/22/15	3/11/17	Scaffold	SC	SAMEA1025233	GCA_001168045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/045/GCA_001168045.1_6753_1_9	-	SMRU1473
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31037	65.4	-	CNDO01	182	4326	4017	3/23/15	3/12/17	Scaffold	SC	SAMEA961628	GCA_001397135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/135/GCA_001397135.1_6280_3_3	-	Bir 100
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.69749	50.1	-	NAHY01	823	5972	5459	4/17/17	4/21/17	Contig	US Food and Drug Administration	SAMN05757714	GCA_002093035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/035/GCA_002093035.1_ASM209303v1	-	KCJK1866
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.10684	51.8	-	MXYD01	105	5296	5006	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368697	GCA_002062895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/895/GCA_002062895.1_ASM206289v1	-	BCW_2830
Staphylococcus aureus CUHK_HK2007	1435359	PRJNA231222	231222	Terrabacteria group	Firmicutes	2.99787	32.6	-	AZMZ01	81	3156	3008	7/23/14	3/4/17	Contig	The Chinese University of Hong Kong	SAMN02442046	GCA_000732835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/835/GCA_000732835.1_ASM73283v1	24969089	CUHK_HK2007
Staphylococcus aureus subsp. aureus CO-06	904793	PRJNA53821	53821	Terrabacteria group	Firmicutes	2.89206	32.6	-	AJKC01	62	3072	2880	7/28/14	3/4/17	Contig	J. Craig Venter Institute	SAMN00138224	GCA_000734845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/734/845/GCA_000734845.1_Saureusco06v1.0	-	CO-06
Salmonella enterica subsp. enterica serovar Schwardzengrund	1967655	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.64217	52.1	-	MXYE01	66	4701	4469	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368696	GCA_002062905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/905/GCA_002062905.1_ASM206290v1	-	BCW_2829
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.0118	50.4	-	NAFM01	94	5216	4851	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05757747	GCA_002099405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/405/GCA_002099405.1_ASM209940v1	-	KCJK1906
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29327	65.3	-	CNDM01	197	4333	3971	3/23/15	3/13/17	Scaffold	SC	SAMEA961629	GCA_001397155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/155/GCA_001397155.1_6280_3_2	-	Bir 99
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.16325	39.6	-	CKCX01	72	2310	2061	3/21/15	3/4/17	Scaffold	SC	SAMEA1023955	GCA_001168185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/185/GCA_001168185.1_6593_5_4	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.06582	39.6	-	CIMF01	30	2250	2008	3/21/15	3/6/17	Scaffold	SC	SAMEA1023794	GCA_001168325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/325/GCA_001168325.1_6631_4_9	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.32175	65.4	-	CNDQ01	165	4316	3978	3/23/15	3/13/17	Scaffold	SC	SAMEA961630	GCA_001397175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/175/GCA_001397175.1_6280_3_5	-	Bir 102
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.02027	50.8	-	NAFN01	96	5236	4911	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05757745	GCA_002099435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/435/GCA_002099435.1_ASM209943v1	-	KCJK1916
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.95916	52.1	-	MXYH01	130	5145	4858	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368692	GCA_002062935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/935/GCA_002062935.1_ASM206293v1	-	BCW_2825
Staphylococcus aureus subsp. aureus	46170	PRJNA255947	255947	Terrabacteria group	Firmicutes	2.80842	32.7	-	JPWO01	11	2915	2732	8/13/14	3/4/17	Contig	Cork Institute of Technology	SAMN02947221	GCA_000739205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/739/205/GCA_000739205.1_ASM73920v1	25212625	NGS-ED-1006
Staphylococcus aureus	1280	PRJNA258046	258046	Terrabacteria group	Firmicutes	2.85436	32.7	-	JQGQ01	107	3019	2857	9/2/14	3/4/17	Contig	University of Malaya	SAMN02983094	GCA_000747275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/275/GCA_000747275.1_ASM74727v1	-	327
Salmonella enterica subsp. enterica serovar Bredeny	1967645	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.82777	52	-	MXYG01	57	4919	4678	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368693	GCA_002062945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/945/GCA_002062945.1_ASM206294v1	-	BCW_2826
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.02188	50.8	-	NAFO01	104	5233	4909	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05757743	GCA_002099455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/455/GCA_002099455.1_ASM209945v1	-	KCJK1925
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30364	65.4	-	CNDN01	155	4294	3978	3/23/15	3/13/17	Scaffold	SC	SAMEA961631	GCA_001397195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/195/GCA_001397195.1_6280_3_4	-	Bir 101
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05867	39.6	-	CLRO01	50	2239	1985	3/21/15	3/4/17	Scaffold	SC	SAMEA1028602	GCA_001168345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/345/GCA_001168345.1_6972_2_4	-	SMRU2548
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.11771	39.9	-	CNAK01	100	2274	1934	3/23/15	3/6/17	Scaffold	SC	SAMEA1022950	GCA_001168425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/425/GCA_001168425.1_6930_7_12	-	0149A
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30649	65.4	-	CNDR01	169	4299	3965	3/23/15	3/12/17	Scaffold	SC	SAMEA961632	GCA_001397215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/215/GCA_001397215.1_6280_3_8	-	Bir 105
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.01262	50.4	-	NAGC01	113	5230	4850	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05757741	GCA_002099465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/465/GCA_002099465.1_ASM209946v1	-	KCJK1963
Salmonella enterica subsp. enterica serovar Wilhemsburg	1967662	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.78313	52	-	MXYK01	80	4808	4529	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368689	GCA_002062955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/955/GCA_002062955.1_ASM206295v1	-	BCW_2822
Staphylococcus aureus	1280	PRJEB6391	256289	Terrabacteria group	Firmicutes	2.7484	32.2	-	CCEL01	35	2748	2601	9/6/14	3/4/17	Contig	WTSI	SAMEA2008002	GCA_000751255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/255/GCA_000751255.1_Sa_FSA084	-	-
Staphylococcus aureus	1280	PRJEB6389	256287	Terrabacteria group	Firmicutes	2.78371	32.2	-	CCEH01	58	2784	2593	9/5/14	3/4/17	Contig	WTSI	SAMEA2007889	GCA_000751515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/515/GCA_000751515.1_Sa_FSA037	-	-
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.81513	52.2	-	MXVV01	75	4904	4641	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368760	GCA_002062995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/062/995/GCA_002062995.1_ASM206299v1	-	BCW_2895
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.01396	50.4	-	NAFP01	100	5222	4846	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05757740	GCA_002099495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/495/GCA_002099495.1_ASM209949v1	-	KCJK2028
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31014	65.4	-	CNDS01	150	4307	3993	3/23/15	3/12/17	Scaffold	SC	SAMEA961633	GCA_001397235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/235/GCA_001397235.1_6280_3_9	-	Bir 106
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.03367	39.7	-	CRBA01	73	2233	2028	3/23/15	3/4/17	Scaffold	SC	SAMEA1024645	GCA_001168445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/445/GCA_001168445.1_6730_7_8	-	SMRU704
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12534	39.6	-	CLUN01	52	2342	2075	3/21/15	3/9/17	Scaffold	SC	SAMEA1025716	GCA_001168505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/505/GCA_001168505.1_6983_2_19	-	SMRU2227
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.35781	65.5	-	CNDP01	147	4324	4002	3/23/15	3/13/17	Scaffold	SC	SAMEA961634	GCA_001397255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/255/GCA_001397255.1_6280_3_6	-	Bir 103
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.01388	50.4	-	NAFQ01	103	5227	4853	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05757738	GCA_002099525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/525/GCA_002099525.1_ASM209952v1	-	KCJK2068
Salmonella enterica subsp. enterica serovar Bareilly	58096	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66519	52.1	-	MXWA01	61	4707	4496	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368755	GCA_002063005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/005/GCA_002063005.1_ASM206300v1	-	BCW_2890
Staphylococcus aureus	1280	PRJEB6390	256288	Terrabacteria group	Firmicutes	2.80552	32.2	-	CCEK01	47	2801	2628	9/5/14	3/4/17	Contig	WTSI	SAMEA2007892	GCA_000751875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/751/875/GCA_000751875.1_Sa_FSA096	-	-
Staphylococcus aureus	1280	PRJNA257536	257536	Terrabacteria group	Firmicutes	2.76339	32.7	-	JQIZ01	95	2884	2725	10/3/14	3/4/17	Contig	University of Malaya	SAMN02953024	GCA_000763455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/763/455/GCA_000763455.1_ASM76345v1	-	337
Salmonella enterica subsp. enterica serovar Litchfield	486998	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.65761	52.2	-	MXVY01	55	4724	4493	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368757	GCA_002063035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/035/GCA_002063035.1_ASM206303v1	-	BCW_2892
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.15658	50.7	-	NAFR01	141	5476	5019	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05757736	GCA_002099535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/535/GCA_002099535.1_ASM209953v1	-	KCJK2104
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33623	65.5	-	CNDL01	141	4294	3992	3/23/15	3/13/17	Scaffold	SC	SAMEA961636	GCA_001397275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/275/GCA_001397275.1_6280_3_12	-	Bir 109
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.14662	39.7	-	CMVZ01	83	2303	2008	3/23/15	3/15/17	Scaffold	SC	SAMEA1022917	GCA_001168585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/585/GCA_001168585.1_5756_6_9	-	305
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.03639	39.6	-	CRLH01	79	2231	2012	3/23/15	3/4/17	Scaffold	SC	SAMEA1024893	GCA_001168605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/605/GCA_001168605.1_6755_1_13	-	SMRU781
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.2808	65.3	-	CNDV01	156	4284	3992	3/23/15	3/12/17	Scaffold	SC	SAMEA961637	GCA_001397295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/295/GCA_001397295.1_6280_4_1	-	Bir 110
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.02129	50.4	-	NAFS01	117	5243	4851	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05757735	GCA_002099555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/555/GCA_002099555.1_ASM209955v1	-	KCJK2115
Salmonella enterica subsp. enterica serovar Worthington	1160769	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.9003	52.2	-	MXWD01	424	5139	4657	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368752	GCA_002063055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/055/GCA_002063055.1_ASM206305v1	-	BCW_2887
Staphylococcus aureus subsp. aureus MRSA_PR1	1004953	PRJNA65467	65467	Terrabacteria group	Firmicutes	2.76255	32.7	-	ANPO01	25	2866	2737	11/17/14	3/4/17	Contig	"Pharmacogenomics Centre, Universiti Teknologi MARA"	SAMN03196741	GCA_000784385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/784/385/GCA_000784385.1_MRSA_PR1v1.0	25197474	MRSA_PR1
Staphylococcus aureus	1280	PRJNA257767	257767	Terrabacteria group	Firmicutes	3.01458	32.7	-	JQNU01	168	3173	3022	11/25/14	3/4/17	Contig	University of Malaya	SAMN02978821	GCA_000787025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/787/025/GCA_000787025.1_ASM78702v1	-	346
Salmonella enterica subsp. enterica serovar Meleagridis	486999	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.78149	52.2	-	MXWK01	63	4840	4579	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368744	GCA_002063075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/075/GCA_002063075.1_ASM206307v1	-	BCW_2879
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.27644	50.2	-	NAFT01	306	5508	5066	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05757733	GCA_002099585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/585/GCA_002099585.1_ASM209958v1	-	KCJK2140
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30013	65.4	-	CNDI01	168	4306	3984	3/22/15	3/13/17	Scaffold	SC	SAMEA961638	GCA_001397315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/315/GCA_001397315.1_6280_3_10	-	Bir 107
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.16189	39.6	-	CLHP01	37	2362	2099	3/21/15	3/9/17	Scaffold	SC	SAMEA1025932	GCA_001168625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/625/GCA_001168625.1_6925_5_2	-	SMRU2162
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.15833	39.7	-	CPKU01	363	2337	2113	3/22/15	3/4/17	Scaffold	SC	SAMEA682525	GCA_001168645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/645/GCA_001168645.1_5392_7_6	-	spnIC426
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29563	65.4	-	CNDK01	151	4301	3994	3/23/15	3/12/17	Scaffold	SC	SAMEA961639	GCA_001397335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/335/GCA_001397335.1_6280_3_11	-	Bir 108
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.1514	50.7	-	NAFW01	157	5469	5014	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05655993	GCA_002099605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/605/GCA_002099605.1_ASM209960v1	-	KCJK5576
Salmonella enterica subsp. enterica serovar Javiana	363569	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.60446	52.2	-	MXWL01	42	4697	4427	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368743	GCA_002063095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/095/GCA_002063095.1_ASM206309v1	-	BCW_2878
Staphylococcus aureus subsp. aureus	46170	PRJEB5454	268868	Terrabacteria group	Firmicutes	2.8001	32.8	-	CBZH01	131	2903	2758	11/29/14	3/4/17	Contig	IFH_MS	SAMEA3158466	GCA_000801255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/255/GCA_000801255.1_MRSA_S1_CLCBio_denovo	-	MRSA_S1
Staphylococcus aureus	1280	PRJEB6981	260902	Terrabacteria group	Firmicutes	2.67531	32.8	-	CCXN01	17	2745	2595	9/23/14	3/4/17	Contig	Section of biotechnology	SAMEA2771242	GCA_000824985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/824/985/GCA_000824985.1_SAU060112_PRJEB6981_wgs	-	-
Salmonella enterica subsp. enterica serovar Elizabethville	1967992	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.96701	52.2	-	MXWQ01	444	5335	4803	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368737	GCA_002063115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/115/GCA_002063115.1_ASM206311v1	-	BCW_2872
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.01579	50.4	-	NAFU01	108	5226	4844	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05757727	GCA_002099615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/615/GCA_002099615.1_ASM209961v1	-	KCJK2158
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33797	65.5	-	CNBD01	228	4289	4011	3/23/15	3/12/17	Scaffold	SC	SAMEA961640	GCA_001397355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/355/GCA_001397355.1_5237_3_6	-	BIR-14
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.18114	39.5	-	CLGH01	49	2425	2180	3/21/15	3/11/17	Scaffold	SC	SAMEA1025817	GCA_001168745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/745/GCA_001168745.1_6925_4_13	-	23F
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.21812	39.4	-	CRCY01	82	2456	2195	3/22/15	3/10/17	Scaffold	SC	SAMEA1024816	GCA_001168765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/765/GCA_001168765.1_6731_3_22	-	SMRU1054
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31846	65.5	-	CNBG01	330	4324	4019	3/23/15	3/13/17	Scaffold	SC	SAMEA961641	GCA_001397375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/375/GCA_001397375.1_5237_3_7	-	BIR-15
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.25753	50.3	-	NAFV01	136	5496	5101	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05757725	GCA_002099625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/625/GCA_002099625.1_ASM209962v1	-	KCJK2198
Salmonella enterica subsp. enterica serovar Give	46626	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.64528	52.2	-	MXWV01	644	4971	4390	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368732	GCA_002063135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/135/GCA_002063135.1_ASM206313v1	-	BCW_2867
Staphylococcus aureus	1280	PRJNA263555	263555	Terrabacteria group	Firmicutes	2.88011	32.9	-	JSYA01	44	3003	2791	1/21/15	3/4/17	Contig	Animal and Plant Quarantine Agency	SAMN03103724	GCA_000827155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/827/155/GCA_000827155.1_ASM82715v1	-	K12PJN53
Staphylococcus aureus MRSA_CVM43477	1448137	PRJNA234426	234426	Terrabacteria group	Firmicutes	2.7568	32.7	-	JANQ01	197	2935	2670	1/30/15	3/4/17	Contig	FDA/CVM	SAMN02583623	GCA_000830555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/830/555/GCA_000830555.1_ASM83055v1	-	MRSA_CVM43477
Salmonella enterica subsp. enterica serovar Virchow	48409	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.77083	52.1	-	MXYP01	64	4883	4641	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368684	GCA_002063155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/155/GCA_002063155.1_ASM206315v1	-	BCW_2817
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.15238	50.7	-	NAFX01	155	5470	5017	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05655980	GCA_002099665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/665/GCA_002099665.1_ASM209966v1	-	KCJK5581
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30546	65.4	-	CNCX01	181	4315	3985	3/23/15	3/13/17	Scaffold	SC	SAMEA961643	GCA_001397395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/395/GCA_001397395.1_6221_2_7	-	Bir 30
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.20224	39.5	-	CMIM01	90	2421	2178	3/23/15	3/11/17	Scaffold	SC	SAMEA1029293	GCA_001168865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/865/GCA_001168865.1_7038_7_12	-	25A
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21578	39.6	-	CPLC01	95	2466	2207	3/22/15	3/10/17	Scaffold	SC	SAMEA1408265	GCA_001168885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/885/GCA_001168885.1_7444_8_32	-	9903+09147
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30533	65.4	-	CNCU01	174	4312	4027	3/23/15	3/13/17	Scaffold	SC	SAMEA961646	GCA_001397435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/435/GCA_001397435.1_6221_2_5	-	Bir 27
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.04425	50.4	-	NAFY01	119	5277	4905	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05789715	GCA_002099685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/685/GCA_002099685.1_ASM209968v1	-	KCJK1933
Salmonella enterica subsp. enterica serovar London	149390	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.67576	52.2	-	MXWW01	49	4734	4520	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368731	GCA_002063165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/165/GCA_002063165.1_ASM206316v1	-	BCW_2866
Staphylococcus aureus	1280	PRJNA272749	272749	Terrabacteria group	Firmicutes	2.81024	32.7	-	JXOA01	273	2968	2727	2/3/15	3/4/17	Contig	Swansea University	SAMN03287930	GCA_000831635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/635/GCA_000831635.1_ASM83163v1	-	PB1-1
Staphylococcus aureus	1280	PRJNA272749	272749	Terrabacteria group	Firmicutes	2.81102	32.7	-	JXRX01	427	3103	2716	2/3/15	3/4/17	Contig	Swansea University	SAMN03287931	GCA_000831765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/765/GCA_000831765.1_ASM83176v1	-	PB1-15-1
Salmonella enterica subsp. enterica serovar Brandenburg	149387	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.61886	52.2	-	MXWG01	177	4761	4416	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368748	GCA_002063195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/195/GCA_002063195.1_ASM206319v1	-	BCW_2883
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.36232	50.4	-	NAGB01	806	5464	5046	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05789717	GCA_002099695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/695/GCA_002099695.1_ASM209969v1	-	KCJK2329
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30473	65.3	-	CNCQ01	288	4380	3981	3/22/15	3/13/17	Scaffold	SC	SAMEA961647	GCA_001397455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/455/GCA_001397455.1_6221_2_2	-	Bir 18
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.08173	39.7	-	CKBQ01	67	2303	2082	3/21/15	3/11/17	Scaffold	SC	SAMEA974665	GCA_001168905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/905/GCA_001168905.1_6259_8_23	-	19F
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.03999	39.7	-	CMGR01	70	2228	2026	3/23/15	3/11/17	Scaffold	SC	SAMEA1029197	GCA_001168945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/945/GCA_001168945.1_7038_4_4	-	SMRU2932
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.2766	65.3	-	CNCR01	208	4312	3993	3/23/15	3/13/17	Scaffold	SC	SAMEA961648	GCA_001397475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/475/GCA_001397475.1_6221_2_3	-	Bir 22
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.72804	50.8	-	NADX01	268	4848	4508	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05789714	GCA_002099715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/715/GCA_002099715.1_ASM209971v1	-	KCJK2549
Salmonella enterica subsp. enterica serovar Hiduddify	1729588	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.67122	52.1	-	MXWH01	769	5021	4379	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368747	GCA_002063205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/205/GCA_002063205.1_ASM206320v1	-	BCW_2882
Staphylococcus aureus	1280	PRJNA272749	272749	Terrabacteria group	Firmicutes	2.80402	32.7	-	JXRY01	288	2990	2726	2/3/15	3/4/17	Contig	Swansea University	SAMN03287932	GCA_000831775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/775/GCA_000831775.1_ASM83177v1	-	PB1-15-2
Staphylococcus aureus	1280	PRJNA272749	272749	Terrabacteria group	Firmicutes	2.84217	32.7	-	JXRZ01	454	3055	2726	2/3/15	3/4/17	Contig	Swansea University	SAMN03287933	GCA_000831785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/785/GCA_000831785.1_ASM83178v1	-	PB3-1
"Salmonella enterica subsp. enterica serovar 4,[5],12:i:-"	440524	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.00035	52.1	-	MXXB01	585	5437	4847	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368727	GCA_002063225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/225/GCA_002063225.1_ASM206322v1	-	BCW_2861
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.02623	50.5	-	NADY01	85	5124	4840	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05655970	GCA_002099735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/735/GCA_002099735.1_ASM209973v1	-	KCJK5633
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.27117	65.3	-	CNDT01	213	4328	3989	3/23/15	3/12/17	Scaffold	SC	SAMEA961649	GCA_001397495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/495/GCA_001397495.1_6280_4_2	-	Bir 111
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.0428	39.6	-	CQWR01	140	2190	1968	3/22/15	3/10/17	Scaffold	SC	SAMEA1024864	GCA_001169085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/085/GCA_001169085.1_6714_7_5	-	SMRU749
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.17263	39.4	-	CMHJ01	75	2438	2178	3/23/15	3/11/17	Scaffold	SC	SAMEA1029240	GCA_001169105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/105/GCA_001169105.1_7038_5_6	-	SMRU2958
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29631	65.4	-	CNCZ01	162	4291	3995	3/23/15	3/13/17	Scaffold	SC	SAMEA961650	GCA_001397515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/515/GCA_001397515.1_6221_3_5	-	Bir 41
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.02328	50.5	-	NADZ01	82	5117	4834	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05655961	GCA_002099765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/765/GCA_002099765.1_ASM209976v1	-	KCJK5635
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.79501	52.2	-	MXXA01	81	4913	4675	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368728	GCA_002063255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/255/GCA_002063255.1_ASM206325v1	-	BCW_2862
Staphylococcus aureus	1280	PRJNA272749	272749	Terrabacteria group	Firmicutes	2.84333	32.7	-	JXSE01	358	3001	2740	2/3/15	3/4/17	Contig	Swansea University	SAMN03287938	GCA_000831845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/845/GCA_000831845.1_ASM83184v1	-	PB3-74
Staphylococcus aureus	1280	PRJNA272749	272749	Terrabacteria group	Firmicutes	2.84245	32.7	-	JXSC01	306	2977	2747	2/3/15	3/4/17	Contig	Swansea University	SAMN03287936	GCA_000831855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/855/GCA_000831855.1_ASM83185v1	-	PB3-32-2
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80591	52.1	-	MXXC01	70	4960	4693	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368726	GCA_002063265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/265/GCA_002063265.1_ASM206326v1	-	BCW_2860
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.64899	50.9	-	NAEF01	111	4804	4462	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05655892	GCA_002099785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/785/GCA_002099785.1_ASM209978v1	-	KCJK5681
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28468	65.4	-	CNDD01	161	4294	3980	3/22/15	3/13/17	Scaffold	SC	SAMEA961651	GCA_001397535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/535/GCA_001397535.1_6221_3_4	-	Bir 40
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.14849	39.8	-	CLQY01	64	2357	2127	3/21/15	3/11/17	Scaffold	SC	SAMEA1028685	GCA_001169125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/125/GCA_001169125.1_6972_2_1	-	SMRU2545
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.1084	39.9	-	CMTV01	150	2252	1975	3/23/15	3/11/17	Scaffold	SC	SAMEA1022851	GCA_001169165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/165/GCA_001169165.1_5737_3_10	-	111_81
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.27493	65.4	-	CNDC01	181	4292	3987	3/23/15	3/12/17	Scaffold	SC	SAMEA961652	GCA_001397555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/555/GCA_001397555.1_6221_3_3	-	Bir 39
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.65113	50.9	-	NAEC01	102	4797	4459	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05655916	GCA_002099795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/795/GCA_002099795.1_ASM209979v1	-	KCJK5678
Salmonella enterica subsp. enterica serovar Corvallis	593905	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.02007	51.9	-	MXXD01	76	5174	4877	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368724	GCA_002063295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/295/GCA_002063295.1_ASM206329v1	-	BCW_2858
Staphylococcus aureus	1280	PRJNA272749	272749	Terrabacteria group	Firmicutes	2.83972	32.7	-	JXSD01	452	3045	2719	2/3/15	3/4/17	Contig	Swansea University	SAMN03287937	GCA_000831865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/865/GCA_000831865.1_ASM83186v1	-	PB3-72
Staphylococcus aureus	1280	PRJNA272749	272749	Terrabacteria group	Firmicutes	2.8396	32.7	-	JXSB01	495	3077	2721	2/3/15	3/4/17	Contig	Swansea University	SAMN03287935	GCA_000831885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/885/GCA_000831885.1_ASM83188v1	-	PB3-32-1
Salmonella enterica subsp. enterica serovar Cerro	340188	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.55586	52.3	-	MXXM01	43	4603	4362	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368715	GCA_002063315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/315/GCA_002063315.1_ASM206331v1	-	BCW_2849
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.02688	50.5	-	NAEA01	82	5121	4845	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05655941	GCA_002099805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/805/GCA_002099805.1_ASM209980v1	-	KCJK5636
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.24857	65.3	-	CNCW01	303	4335	3945	3/22/15	3/13/17	Scaffold	SC	SAMEA961653	GCA_001397575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/575/GCA_001397575.1_6221_3_2	-	Bir 38
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.22508	39.8	-	CPTU01	86	2440	2238	3/23/15	3/10/17	Scaffold	SC	SAMEA682571	GCA_001169185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/185/GCA_001169185.1_5429_8_3	-	09B09043
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.13436	39.6	-	CQXR01	52	2369	2125	3/23/15	3/11/17	Scaffold	SC	SAMEA1024677	GCA_001169205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/205/GCA_001169205.1_6730_1_3	-	SMRU579
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.38184	65.5	-	CNCO01	247	4349	4001	3/23/15	3/13/17	Scaffold	SC	SAMEA961655	GCA_001397595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/595/GCA_001397595.1_6221_2_12	-	Bir 36
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.64689	50.9	-	NAED01	115	4793	4446	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05655907	GCA_002099815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/815/GCA_002099815.1_ASM209981v1	-	KCJK5679
Salmonella enterica subsp. enterica serovar Java	224729	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.75978	52.2	-	MXXO01	187	4886	4578	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368713	GCA_002063335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/335/GCA_002063335.1_ASM206333v1	-	BCW_2847
Staphylococcus aureus	1280	PRJNA272749	272749	Terrabacteria group	Firmicutes	2.82358	32.7	-	JXSG01	880	3248	2648	2/3/15	3/4/17	Contig	Swansea University	SAMN03287940	GCA_000831925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/925/GCA_000831925.1_ASM83192v1	-	RB4
Staphylococcus aureus	1280	PRJNA272749	272749	Terrabacteria group	Firmicutes	2.855	32.7	-	JXSF01	306	3080	2771	2/3/15	3/4/17	Contig	Swansea University	SAMN03287939	GCA_000831965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/965/GCA_000831965.1_ASM83196v1	-	RB1
Salmonella enterica subsp. enterica serovar Havana	179997	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.71357	52.2	-	MXXL01	43	4746	4496	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368716	GCA_002063345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/345/GCA_002063345.1_ASM206334v1	-	BCW_2850
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.64931	50.9	-	NAEG01	100	4796	4459	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05655883	GCA_002099865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/865/GCA_002099865.1_ASM209986v1	-	KCJK5682
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33177	65.4	-	CNCM01	192	4349	4033	3/23/15	3/13/17	Scaffold	SC	SAMEA961656	GCA_001397615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/615/GCA_001397615.1_6221_2_11	-	Bir 35
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12322	39.7	-	CLGF01	42	2360	2136	3/21/15	3/11/17	Scaffold	SC	SAMEA1026119	GCA_001169245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/245/GCA_001169245.1_6925_4_11	-	SMRU2147
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.1176	39.6	-	CMDD01	63	2381	2110	3/21/15	3/11/17	Scaffold	SC	SAMEA1029136	GCA_001169265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/265/GCA_001169265.1_7011_3_15	-	SMRU2751
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31517	65.4	-	CNCP01	211	4320	3985	3/23/15	3/13/17	Scaffold	SC	SAMEA961657	GCA_001397635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/635/GCA_001397635.1_6221_2_10	-	Bir 34
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.64609	50.9	-	NAEJ01	119	4790	4455	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05655868	GCA_002099875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/875/GCA_002099875.1_ASM209987v1	-	KCJK5715
Salmonella enterica subsp. enterica serovar Derby	28144	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.00977	51.9	-	MXXV01	226	5193	4827	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368705	GCA_002063355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/355/GCA_002063355.1_ASM206335v1	-	BCW_2839
Staphylococcus aureus subsp. aureus	46170	PRJNA268065	268065	Terrabacteria group	Firmicutes	2.81102	32.8	-	JXHX01	74	2935	2733	2/19/15	3/4/17	Contig	University of Applied Sciences of Western Switzerland hepia	SAMN03202657	GCA_000877835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/835/GCA_000877835.1_FRI137_1.0	26112789	FRI137
Staphylococcus aureus subsp. aureus	46170	PRJNA267633	267633	Terrabacteria group	Firmicutes	2.91499	32.9812	plasmid pCCM5757-1:NZ_CM003165.1/CM003165.1; plasmid pCCM5757-2:NZ_CM003166.1/CM003166.1	JXHU01	163	3071	2937	2/19/15	3/4/17	Contig	University of Applied Sciences of Western Switzerland hepia	SAMN03198884	GCA_000877845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/845/GCA_000877845.1_CCM5757_1.0	26112789	CCM5757
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.96563	52	-	MXYB01	57	5128	4791	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368699	GCA_002063385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/385/GCA_002063385.1_ASM206338v1	-	BCW_2833
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.6455	50.9	-	NAEI01	101	4795	4458	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05655875	GCA_002099885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/885/GCA_002099885.1_ASM209988v1	-	KCJK5713
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.34124	65.4	-	CNCS01	177	4327	4022	3/22/15	3/12/17	Scaffold	SC	SAMEA961658	GCA_001397655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/655/GCA_001397655.1_6221_2_9	-	Bir 33
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.05735	39.6	-	CRPM01	67	2287	2063	3/23/15	3/10/17	Scaffold	SC	SAMEA1024781	GCA_001169285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/285/GCA_001169285.1_6775_1_17	-	SMRU833
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.13227	39.5	-	CKDT01	105	2330	2060	3/21/15	3/14/17	Scaffold	SC	SAMEA1023766	GCA_001169325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/325/GCA_001169325.1_6630_1_18	-	5
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.25639	65.4	-	CNCV01	152	4264	3959	3/23/15	3/13/17	Scaffold	SC	SAMEA961659	GCA_001397675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/675/GCA_001397675.1_6221_2_8	-	Bir 31
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.65523	50.9	-	NAEH01	113	4800	4462	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05655878	GCA_002099895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/895/GCA_002099895.1_ASM209989v1	-	KCJK5683
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80882	52.2	-	MXYF01	52	4912	4661	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368695	GCA_002063415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/415/GCA_002063415.1_ASM206341v1	-	BCW_2828
Staphylococcus aureus subsp. aureus	46170	PRJNA268068	268068	Terrabacteria group	Firmicutes	2.7702	32.8661	plasmid pA900624:NZ_CM003164.1/CM003164.1	JXHT01	82	2852	2682	2/19/15	3/4/17	Contig	University of Applied Sciences of Western Switzerland hepia	SAMN03202272	GCA_000877855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/855/GCA_000877855.1_A900624_1.0	26112789	A900624
Staphylococcus aureus subsp. aureus	46170	PRJNA268545	268545	Terrabacteria group	Firmicutes	2.74537	32.8	-	JXIF01	196	2906	2702	2/19/15	3/4/17	Contig	University of Applied Sciences of Western Switzerland hepia	SAMN03219991	GCA_000877865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/865/GCA_000877865.1_SA-085_1.0	26112789	SA-085
Salmonella enterica subsp. enterica serovar Weltenvreden	1967660	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.93072	52.2	-	MXYM01	246	5077	4722	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368687	GCA_002063435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/435/GCA_002063435.1_ASM206343v1	-	BCW_2820
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.64586	50.9	-	NAEK01	105	4794	4456	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05655861	GCA_002099945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/945/GCA_002099945.1_ASM209994v1	-	KCJK5716
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.3328	65.5	-	CNCY01	137	4305	4030	3/22/15	3/13/17	Scaffold	SC	SAMEA961660	GCA_001397695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/695/GCA_001397695.1_6221_3_6	-	Bir 42
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.02099	39.7	-	CPPP01	96	2187	1992	3/23/15	3/11/17	Scaffold	SC	SAMEA682397	GCA_001169405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/405/GCA_001169405.1_5366_8_2	-	09B00621
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10945	39.5	-	CILX01	79	2344	2105	3/21/15	3/11/17	Scaffold	SC	SAMEA974675	GCA_001169445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/445/GCA_001169445.1_6259_7_9	-	7B
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31617	65.5	-	CNDF01	155	4287	3988	3/23/15	3/13/17	Scaffold	SC	SAMEA961661	GCA_001397715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/715/GCA_001397715.1_6221_3_7	-	Bir 43
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.00444	50.4	-	NAGA01	104	5219	4847	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05789712	GCA_002099955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/955/GCA_002099955.1_ASM209995v1	-	KCJK2154
Salmonella enterica subsp. enterica serovar Worthington	1160769	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.91251	52.3	-	MXYJ01	98	4978	4707	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368690	GCA_002063445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/445/GCA_002063445.1_ASM206344v1	-	BCW_2823
Staphylococcus aureus subsp. aureus	46170	PRJNA268548	268548	Terrabacteria group	Firmicutes	2.92411	32.892	plasmid pSA-260:NZ_CM003171.1/CM003171.1	JXIB01	142	3081	2869	2/19/15	3/4/17	Contig	University of Applied Sciences of Western Switzerland hepia	SAMN03219994	GCA_000877915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/915/GCA_000877915.1_SA-260_1.0	26112789	SA-260
Staphylococcus aureus subsp. aureus	46170	PRJNA268488	268488	Terrabacteria group	Firmicutes	2.79232	33.2	-	JXIE01	98	2923	2763	2/19/15	3/4/17	Contig	University of Applied Sciences of Western Switzerland hepia	SAMN03219989	GCA_000877925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/925/GCA_000877925.1_SA-083_1.0	26112789	SA-083
Salmonella enterica subsp. enterica serovar Virchow	48409	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.6911	52.2	-	MXYO01	42	4734	4503	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368685	GCA_002063525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/525/GCA_002063525.1_ASM206352v1	-	BCW_2818
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.87455	50.6	-	NAFZ01	82	4932	4648	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05789713	GCA_002099965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/965/GCA_002099965.1_ASM209996v1	-	KCJK1990
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.37164	65.5	-	CNDG01	260	4314	3997	3/23/15	3/13/17	Scaffold	SC	SAMEA961662	GCA_001397735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/735/GCA_001397735.1_6221_3_8	-	Bir 44
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10793	39.6	-	CRAY01	56	2310	2060	3/23/15	3/11/17	Scaffold	SC	SAMEA1025008	GCA_001169465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/465/GCA_001169465.1_6730_8_1	-	SMRU721
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.17213	39.4	-	CLNI01	62	2423	2179	3/21/15	3/11/17	Scaffold	SC	SAMEA1028945	GCA_001169485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/485/GCA_001169485.1_6938_8_17	-	SMRU2729
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.33221	65.5	-	CNDH01	157	4317	4011	3/22/15	3/12/17	Scaffold	SC	SAMEA961663	GCA_001397755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/755/GCA_001397755.1_6221_3_9	-	Bir 45
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.65012	50.9	-	NAEB01	95	4794	4458	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05655929	GCA_002099975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/975/GCA_002099975.1_ASM209997v1	-	KCJK5674
Salmonella enterica subsp. enterica serovar Virchow	48409	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.75459	52.1	-	MXYS01	65	4852	4611	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368681	GCA_002063545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/545/GCA_002063545.1_ASM206354v1	-	BCW_2814
Staphylococcus aureus subsp. aureus	46170	PRJNA268547	268547	Terrabacteria group	Firmicutes	2.77776	33.1	-	JXIH01	114	2871	2753	2/19/15	3/4/17	Contig	University of Applied Sciences of Western Switzerland hepia	SAMN03219993	GCA_000877955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/955/GCA_000877955.1_SA-210_1.0	26112789	SA-210
Staphylococcus aureus subsp. aureus	46170	PRJNA267636	267636	Terrabacteria group	Firmicutes	2.79866	32.9788	plasmid pDSM799:NZ_CM003167.1/CM003167.1	JXHV01	95	2903	2739	2/19/15	3/4/17	Contig	University of Applied Sciences of Western Switzerland hepia	SAMN03198887	GCA_000877975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/975/GCA_000877975.1_DSM799_1.0	26112789	DSM 799
Salmonella enterica subsp. enterica serovar Virchow	48409	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66236	52.2	-	MXYT01	60	4730	4490	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368680	GCA_002063555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/555/GCA_002063555.1_ASM206355v1	-	BCW_2813
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.65061	50.9	-	NAEE01	104	4793	4458	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05655901	GCA_002100025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/025/GCA_002100025.1_ASM210002v1	-	KCJK5680
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.27545	65.4	-	CNDA01	252	4335	3982	3/22/15	3/13/17	Scaffold	SC	SAMEA961664	GCA_001397775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/775/GCA_001397775.1_6221_3_10	-	Bir 47
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10014	39.7	-	CKVD01	67	2255	2017	3/21/15	3/10/17	Scaffold	SC	SAMEA1026213	GCA_001169505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/505/GCA_001169505.1_6823_3_23	-	SMRU1919
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11356	39.6	-	CLUY01	40	2358	2117	3/21/15	3/10/17	Scaffold	SC	SAMEA1026078	GCA_001169525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/525/GCA_001169525.1_6983_3_52	-	SMRU2260
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29221	65.3	-	CNDB01	232	4344	3976	3/22/15	3/13/17	Scaffold	SC	SAMEA961665	GCA_001397795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/795/GCA_001397795.1_6221_3_11	-	Bir 48
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.88713	50.6	-	NAEN01	98	5045	4742	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05789724	GCA_002100035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/035/GCA_002100035.1_ASM210003v1	-	KCJK1551
Salmonella enterica subsp. enterica serovar Vinnorrhady	1967658	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.71183	52.1	-	MXYU01	402	4919	4444	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368679	GCA_002063595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/595/GCA_002063595.1_ASM206359v1	-	BCW_2812
Staphylococcus aureus subsp. aureus	46170	PRJNA268061	268061	Terrabacteria group	Firmicutes	2.7401	32.7531	plasmid pFRI1151m:NZ_CM003168.1/CM003168.1	JXHW01	81	2825	2691	2/19/15	3/4/17	Contig	University of Applied Sciences of Western Switzerland hepia	SAMN03202224	GCA_000877985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/877/985/GCA_000877985.1_FRI1151m_1.0	26112789	FRI1151m
Staphylococcus aureus subsp. aureus	46170	PRJNA268074	268074	Terrabacteria group	Firmicutes	2.78533	32.8	-	JXHY01	80	2867	2680	2/19/15	3/4/17	Contig	University of Applied Sciences of Western Switzerland hepia	SAMN03202661	GCA_000878015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/015/GCA_000878015.1_SA-006_1.0	26112789	SA-006
Salmonella enterica subsp. enterica serovar Uganda	487004	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.67693	52.2	-	MXYV01	39	4733	4507	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368678	GCA_002063615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/615/GCA_002063615.1_ASM206361v1	-	BCW_2810
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.10079	50.6	-	NAEM01	223	5407	5019	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05789726	GCA_002100045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/045/GCA_002100045.1_ASM210004v1	-	KCJK1477
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.34285	65.4	-	CNCT01	151	4318	4022	3/23/15	3/13/17	Scaffold	SC	SAMEA961666	GCA_001397815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/815/GCA_001397815.1_6221_3_12	-	Bir 49
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.30662	39.5	-	CQWG01	169	2531	2284	3/22/15	3/11/17	Scaffold	SC	SAMEA1024939	GCA_001169585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/585/GCA_001169585.1_6714_7_1	-	SMRU745
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.05413	39.5	-	CJZO01	44	2236	2015	3/21/15	3/11/17	Scaffold	SC	SAMEA974682	GCA_001169685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/685/GCA_001169685.1_6259_5_17	-	48
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28587	65.3	-	CNAV01	214	4319	4014	3/23/15	3/13/17	Scaffold	SC	SAMEA961667	GCA_001397835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/835/GCA_001397835.1_6174_1_1	-	Bir 50
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.11106	50.6	-	NAEL01	146	5384	5027	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05789725	GCA_002100055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/055/GCA_002100055.1_ASM210005v1	-	KCJK1478
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.93428	52.2	-	MXYW01	789	5374	4711	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368676	GCA_002063625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/625/GCA_002063625.1_ASM206362v1	-	BCW_2804
Staphylococcus aureus subsp. aureus	46170	PRJNA268479	268479	Terrabacteria group	Firmicutes	2.82883	32.785	plasmid pSA-022:NZ_CM003169.1/CM003169.1	JXHZ01	75	2949	2766	2/19/15	3/4/17	Contig	University of Applied Sciences of Western Switzerland hepia	SAMN03219984	GCA_000878025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/025/GCA_000878025.1_SA-022_1.0	26112789	SA-022
Staphylococcus aureus subsp. aureus	46170	PRJNA268482	268482	Terrabacteria group	Firmicutes	2.81776	32.7463	plasmid pSA-038:NZ_CM003170.1/CM003170.1	JXIA01	91	2910	2777	2/19/15	3/4/17	Contig	University of Applied Sciences of Western Switzerland hepia	SAMN03219986	GCA_000878035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/035/GCA_000878035.1_SA-038	26112789	SA-038
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.96243	52.1	-	MXYY01	185	5176	4862	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368672	GCA_002063655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/655/GCA_002063655.1_ASM206365v1	-	BCW_2800
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.89531	50.6	-	NAEO01	111	5060	4758	4/18/17	4/21/17	Contig	US Food and Drug Administration	SAMN05789722	GCA_002100105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/100/105/GCA_002100105.1_ASM210010v1	-	KCJK1705
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.27708	65.3	-	CNBC01	339	4409	4005	3/23/15	3/12/17	Scaffold	SC	SAMEA961668	GCA_001397855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/855/GCA_001397855.1_6174_1_2	-	Bir 51
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.19825	39.6	-	CKWD01	77	2390	2162	3/21/15	3/4/17	Scaffold	SC	SAMEA1025790	GCA_001169705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/705/GCA_001169705.1_6823_5_12	-	SMRU1956
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09221	39.5	-	CKXZ01	73	2310	2068	3/21/15	3/4/17	Scaffold	SC	SAMEA1025781	GCA_001169745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/745/GCA_001169745.1_6823_7_6	-	SMRU1998
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28285	65.3	-	CNBA01	243	4335	3984	3/22/15	3/13/17	Scaffold	SC	SAMEA961669	GCA_001397875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/875/GCA_001397875.1_6174_1_3	-	Bir 52
Escherichia coli SHECO001	1327978	PRJNA198718	198718	Proteobacteria	Gammaproteobacteria	5.36229	50.3	-	ARWT01	323	5900	5303	4/25/17	4/27/17	Contig	"University of Maryland, College Park"	SAMN06677853	GCA_002109305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/305/GCA_002109305.1_E_coli_SHECO001_v1	-	SHECO001
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.95305	52.1	-	MXZA01	217	5210	4883	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368670	GCA_002063665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/665/GCA_002063665.1_ASM206366v1	-	BCW_2798
Staphylococcus aureus subsp. aureus	46170	PRJNA268483	268483	Terrabacteria group	Firmicutes	2.74156	32.8659	plasmid pSA-047:NZ_CM003172.1/CM003172.1	JXIC01	89	2850	2673	2/19/15	3/4/17	Contig	University of Applied Sciences of Western Switzerland hepia	SAMN03219987	GCA_000878055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/055/GCA_000878055.1_SA-047	26112789	SA-047
Staphylococcus aureus subsp. aureus	46170	PRJNA268484	268484	Terrabacteria group	Firmicutes	2.85211	33.1677	plasmid pSA-067:NZ_CM003173.1/CM003173.1	JXID01	203	2982	2808	2/19/15	3/4/17	Contig	University of Applied Sciences of Western Switzerland hepia	SAMN03219988	GCA_000878095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/095/GCA_000878095.1_SA-067_1.0	26112789	SA-067
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.93268	52.1	-	MXYZ01	98	5115	4846	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368671	GCA_002063685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/685/GCA_002063685.1_ASM206368v1	-	BCW_2799
Escherichia coli SHECO002	1330526	PRJNA201374	201374	Proteobacteria	Gammaproteobacteria	5.32689	50.2	-	ASHH01	231	5776	5183	4/26/17	5/1/17	Contig	"University of Maryland, College Park"	SAMN06677852	GCA_002111485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/485/GCA_002111485.1_E_coli_SHECO002_v1	-	SHECO002
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.3187	65.4	-	CNBH01	223	4332	4011	3/22/15	3/13/17	Scaffold	SC	SAMEA961670	GCA_001397895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/895/GCA_001397895.1_6174_1_9	-	Bir 58
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.36172	39.6	-	CROR01	166	2739	2310	3/23/15	3/4/17	Scaffold	SC	SAMEA1025559	GCA_001169765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/765/GCA_001169765.1_6755_6_11	-	SMRU1187
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.15707	39.5	-	CRBJ01	94	2405	2155	3/23/15	3/4/17	Scaffold	SC	SAMEA1024681	GCA_001169785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/785/GCA_001169785.1_6730_8_20	-	SMRU740
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.30443	65.4	-	CNBJ01	215	4318	3957	3/23/15	3/13/17	Scaffold	SC	SAMEA961671	GCA_001397915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/915/GCA_001397915.1_6174_1_8	-	Bir 57
Escherichia coli SHECO003	1330527	PRJNA201375	201375	Proteobacteria	Gammaproteobacteria	5.24769	50.2	-	ASHI01	162	5629	5202	4/26/17	5/1/17	Contig	"University of Maryland, College Park"	SAMN06677851	GCA_002111495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/111/495/GCA_002111495.1_E_coli_SHECO003_v1	-	SHECO003
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.93006	52.1	-	MXZF01	119	5083	4825	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368665	GCA_002063725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/725/GCA_002063725.1_ASM206372v1	-	BCW_2793
Staphylococcus aureus subsp. aureus	46170	PRJNA268546	268546	Terrabacteria group	Firmicutes	3.01221	35.9	-	JXIG01	630	2919	2729	2/19/15	3/4/17	Contig	University of Applied Sciences of Western Switzerland hepia	SAMN03219992	GCA_000878105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/878/105/GCA_000878105.1_SA-120_1.0	26112789	SA-120
Staphylococcus aureus	1280	PRJNA269212	269212	Terrabacteria group	Firmicutes	2.8838	32.8	-	JYFO01	66	3000	2864	2/24/15	3/4/17	Contig	University of Malaya	SAMN03253057	GCA_000932275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/932/275/GCA_000932275.1_ASM93227v1	-	P151
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.03638	51.9	-	MXZD01	98	5188	4902	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368667	GCA_002063745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/745/GCA_002063745.1_ASM206374v1	-	BCW_2795
Escherichia coli	562	PRJNA361484	361484	Proteobacteria	Gammaproteobacteria	5.17411	50.7	-	NEDN01	278	5551	5134	4/28/17	5/3/17	Contig	University of Sao Paulo	SAMN06819254	GCA_002114355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/114/355/GCA_002114355.1_ASM211435v1	-	ICBEcBL-I-09(2)
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28988	65.3	-	CNBF01	250	4356	3963	3/22/15	3/13/17	Scaffold	SC	SAMEA961672	GCA_001397935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/935/GCA_001397935.1_6174_1_11	-	Bir 60
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.13384	39.7	-	CRRK01	85	2362	2135	3/23/15	3/4/17	Scaffold	SC	SAMEA1024667	GCA_001169805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/805/GCA_001169805.1_6805_1_20	-	SMRU1028
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07598	39.7	-	CKIL01	42	2317	2096	3/21/15	3/4/17	Scaffold	SC	SAMEA1023980	GCA_001169945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/945/GCA_001169945.1_6631_3_8	-	32F
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.28839	65.3	-	CNAZ01	253	4354	3970	3/22/15	3/13/17	Scaffold	SC	SAMEA961673	GCA_001397955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/955/GCA_001397955.1_6174_1_10	-	Bir 59
Escherichia coli	562	PRJNA371715	371715	Proteobacteria	Gammaproteobacteria	5.10754	50.6	-	NEFU01	219	5432	5016	5/1/17	5/3/17	Contig	LAU	SAMN06311287	GCA_002116465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/116/465/GCA_002116465.1_ASM211646v1	-	AUH_IMP174
Salmonella enterica subsp. enterica serovar Bredeney	134047	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.65686	52.1	-	MXZE01	66	4743	4508	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368666	GCA_002063755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/755/GCA_002063755.1_ASM206375v1	-	BCW_2794
Staphylococcus aureus	1280	PRJNA263554	263554	Terrabacteria group	Firmicutes	2.8891	32.7	-	JYGF01	31	3018	2816	2/25/15	3/4/17	Contig	Animal and Plant Quarantine Agency	SAMN03103726	GCA_000934285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/285/GCA_000934285.1_ASM93428v1	26950323	K12S0375
Staphylococcus aureus	1280	PRJNA276501	276501	Terrabacteria group	Firmicutes	2.65063	32.6	-	JZIO01	26	2758	2514	3/10/15	3/4/17	Contig	Helsinki University	SAMN03376162	GCA_000949555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/555/GCA_000949555.1_ASM94955v1	25908141	75
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70153	52.2	-	MXZG01	93	4786	4542	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368664	GCA_002063795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/795/GCA_002063795.1_ASM206379v1	-	BCW_2791
Escherichia coli	562	PRJNA371712	371712	Proteobacteria	Gammaproteobacteria	5.19372	50.6	-	NEFS01	224	5472	5107	5/1/17	5/3/17	Contig	LAU	SAMN06311280	GCA_002116475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/116/475/GCA_002116475.1_ASM211647v1	-	AUH_IMP167
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.29321	65.3	-	CNAY01	178	4302	3986	3/23/15	3/13/17	Scaffold	SC	SAMEA961674	GCA_001397975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/975/GCA_001397975.1_6174_1_5	-	Bir 54
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.1251	39.4	-	CKJC01	61	2319	2090	3/21/15	3/4/17	Scaffold	SC	SAMEA1023749	GCA_001169985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/985/GCA_001169985.1_6631_4_6	-	19F
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.15282	39.6	-	CLRA01	51	2405	2162	3/21/15	3/4/17	Scaffold	SC	SAMEA1028730	GCA_001170005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/005/GCA_001170005.1_6972_2_13	-	SMRU2557
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.3274	65.4	-	CNBE01	185	4335	3986	3/23/15	3/13/17	Scaffold	SC	SAMEA961675	GCA_001397995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/995/GCA_001397995.1_6174_1_4	-	Bir 53
Escherichia coli	562	PRJNA371705	371705	Proteobacteria	Gammaproteobacteria	5.31637	50.6	-	NEFP01	298	5600	5137	5/1/17	5/3/17	Contig	LAU	SAMN06311269	GCA_002116485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/116/485/GCA_002116485.1_ASM211648v1	-	AUH_IMP153
Salmonella enterica subsp. enterica serovar Stanley	192953	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7995	52.1	-	MXZK01	266	4992	4623	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368660	GCA_002063805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/805/GCA_002063805.1_ASM206380v1	-	BCW_2786
Staphylococcus aureus	1280	PRJNA276501	276501	Terrabacteria group	Firmicutes	2.6995	32.7	-	JZIN01	31	2766	2598	3/10/15	3/4/17	Contig	Helsinki University	SAMN03376161	GCA_000949565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/565/GCA_000949565.1_ASM94956v1	25908141	9
Staphylococcus aureus	1280	PRJNA276501	276501	Terrabacteria group	Firmicutes	2.66031	32.6	-	JZIP01	25	2765	2525	3/10/15	3/4/17	Contig	Helsinki University	SAMN03376163	GCA_000949575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/575/GCA_000949575.1_ASM94957v1	25908141	110
Salmonella enterica subsp. enterica serovar Tarshyne	1967656	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.71193	52.2	-	MXZH01	67	4712	4475	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368663	GCA_002063835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/835/GCA_002063835.1_ASM206383v1	-	BCW_2789
Escherichia coli	562	PRJNA371709	371709	Proteobacteria	Gammaproteobacteria	5.31613	50.6	-	NEFQ01	328	5630	5137	5/1/17	5/3/17	Contig	LAU	SAMN06311274	GCA_002116495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/116/495/GCA_002116495.1_ASM211649v1	-	AUH_IMP157
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.34812	65.4	-	CNBB01	198	4335	4005	3/23/15	3/13/17	Scaffold	SC	SAMEA961676	GCA_001398015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/015/GCA_001398015.1_6174_1_7	-	Bir 56
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.02474	39.8	-	CLUM01	73	2253	2015	3/21/15	3/4/17	Scaffold	SC	SAMEA1025713	GCA_001170025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/025/GCA_001170025.1_6983_2_5	-	SMRU2213
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.11224	39.7	-	CPOQ01	106	2338	2135	3/23/15	3/4/17	Scaffold	SC	SAMEA682458	GCA_001170045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/045/GCA_001170045.1_5366_5_7	-	08B05979
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.35389	65.5	-	CNBL01	142	4302	4006	3/23/15	3/13/17	Scaffold	SC	SAMEA961677	GCA_001398035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/035/GCA_001398035.1_6174_1_6	-	Bir 55
Escherichia coli	562	PRJNA371704	371704	Proteobacteria	Gammaproteobacteria	5.33366	50.5	-	NEFO01	267	5602	5173	5/1/17	5/3/17	Contig	LAU	SAMN06311264	GCA_002116545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/116/545/GCA_002116545.1_ASM211654v1	-	AUH_IMP149
Salmonella enterica subsp. enterica serovar Stanley	192953	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.76142	52.2	-	MXZM01	63	4869	4615	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368656	GCA_002063845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/845/GCA_002063845.1_ASM206384v1	-	BCW_2782
Staphylococcus aureus	1280	PRJNA276501	276501	Terrabacteria group	Firmicutes	2.64656	32.6	-	JZIQ01	29	2751	2508	3/10/15	3/4/17	Contig	Helsinki University	SAMN03376164	GCA_000949585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/949/585/GCA_000949585.1_ASM94958v1	25908141	112
Staphylococcus aureus	1280	PRJDB3046	274458	Terrabacteria group	Firmicutes	2.92956	32.8	-	BBKC01	144	3091	2936	2/3/15	3/4/17	Contig	International Medical Education and Research Centerh Center	SAMD00019145	GCA_000974385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/385/GCA_000974385.1_ASM97438v1	26047024	OC3
Salmonella enterica subsp. enterica serovar Singapore	487002	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66281	52.2	-	MXZN01	55	4708	4494	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368654	GCA_002063875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/875/GCA_002063875.1_ASM206387v1	-	BCW_2780
Escherichia coli	562	PRJNA371711	371711	Proteobacteria	Gammaproteobacteria	5.19372	50.6	-	NEFR01	224	5472	5107	5/1/17	5/3/17	Contig	LAU	SAMN06311279	GCA_002116555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/116/555/GCA_002116555.1_ASM211655v1	-	AUH_IMP161
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.27418	65.3	-	CNBK01	265	4360	3968	3/23/15	3/13/17	Scaffold	SC	SAMEA961678	GCA_001398055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/055/GCA_001398055.1_6174_2_1	-	Bir 62
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.06721	39.6	-	CMUQ01	182	2219	1994	3/23/15	3/4/17	Scaffold	SC	SAMEA1022898	GCA_001170065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/065/GCA_001170065.1_5737_7_3	-	160
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12325	39.6	-	CRMJ01	72	2387	2151	3/23/15	3/4/17	Scaffold	SC	SAMEA1025002	GCA_001170185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/185/GCA_001170185.1_6755_2_7	-	SMRU799
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.34723	65.4	-	CNBI01	164	4338	3988	3/22/15	3/13/17	Scaffold	SC	SAMEA961679	GCA_001398075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/398/075/GCA_001398075.1_6174_1_12	-	Bir 61
Escherichia coli	562	PRJNA371713	371713	Proteobacteria	Gammaproteobacteria	5.391	50.6	-	NEFT01	296	5684	5247	5/1/17	5/3/17	Contig	LAU	SAMN06311283	GCA_002116565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/116/565/GCA_002116565.1_ASM211656v1	-	AUH_IMP173
"Salmonella enterica subsp. diarizonae serovar 61:-:1,5,7"	1192850	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.74738	51.4	-	MXZP01	660	4969	4267	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368652	GCA_002063885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/885/GCA_002063885.1_ASM206388v1	-	BCW_2777
Staphylococcus aureus	1280	PRJNA280939	280939	Terrabacteria group	Firmicutes	2.68471	32.7	-	LBCS01	10	2750	2570	4/24/15	3/4/17	Contig	NARIC ABC	SAMN03481073	GCA_000981055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/055/GCA_000981055.1_ASM98105v1	26159520	sp17
Staphylococcus aureus subsp. anaerobius	72759	PRJNA275681	275681	Terrabacteria group	Firmicutes	2.91236	32.8	-	LAKI01	200	3036	2835	4/27/15	3/4/17	Contig	Institute of Microbial Technology	SAMN03352185	GCA_000981205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/981/205/GCA_000981205.1_ASM98120v1	-	Mq2T
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.87927	52.1	-	MXZQ01	286	5113	4746	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368651	GCA_002063915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/915/GCA_002063915.1_ASM206391v1	-	BCW_2776
Escherichia coli	562	PRJNA383392	383392	Proteobacteria	Gammaproteobacteria	5.21171	50.3	-	NELU01	158	5388	5011	5/11/17	5/23/17	Contig	University of Sao Paulo	SAMN06763639	GCA_002133385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/385/GCA_002133385.1_ASM213338v1	-	EC-LS
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.4359	65.5	-	LKDR01	304	4402	4163	11/17/15	3/13/17	Scaffold	Columbia University Mailman School of Public Health	SAMN03813783	GCA_001445115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/115/GCA_001445115.1_ASM144511v1	-	BE_14248
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10081	39.5	-	CKXQ01	73	2295	2074	3/21/15	3/4/17	Scaffold	SC	SAMEA1026180	GCA_001170205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/205/GCA_001170205.1_6823_7_17	-	SMRU2009
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.25497	39.4	-	CKFR01	103	2487	2236	3/21/15	3/11/17	Scaffold	SC	SAMEA1023878	GCA_001170325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/325/GCA_001170325.1_6630_3_9	-	6B
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.41411	65.5	-	LKDT01	297	4383	4138	11/17/15	3/13/17	Scaffold	Columbia University Mailman School of Public Health	SAMN03813791	GCA_001445135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/135/GCA_001445135.1_ASM144513v1	-	C30_19588
Escherichia coli	562	PRJNA383394	383394	Proteobacteria	Gammaproteobacteria	5.26841	50.4	-	NELV01	185	5475	5092	5/11/17	5/23/17	Contig	University of Sao Paulo	SAMN06763662	GCA_002133405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/405/GCA_002133405.1_ASM213340v1	-	EC-H
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.86076	52.1	-	MXZR01	217	5036	4713	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368650	GCA_002063925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/925/GCA_002063925.1_ASM206392v1	-	BCW_2775
Staphylococcus aureus MRSN 8611	1410003	PRJNA223627	223627	Terrabacteria group	Firmicutes	2.84107	32.7	-	LBIJ01	52	2983	2830	4/29/15	3/4/17	Contig	J. Craig Venter Institute	SAMN03486514	GCA_000982105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/105/GCA_000982105.1_ASM98210v1	-	MRSN 8611
Staphylococcus aureus MRSN 8613	1410004	PRJNA223628	223628	Terrabacteria group	Firmicutes	2.85098	32.6	-	LBII01	42	3004	2856	4/29/15	3/4/17	Contig	J. Craig Venter Institute	SAMN03486515	GCA_000982135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/135/GCA_000982135.1_ASM98213v1	-	MRSN 8613
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83494	52	-	MXZS01	64	4970	4712	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368649	GCA_002063955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/955/GCA_002063955.1_ASM206395v1	-	BCW_2774
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.0736	50.4	-	NEMK01	84	5266	4912	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420134	GCA_002133425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/425/GCA_002133425.1_ASM213342v1	-	OLC999
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.40569	65.5	-	LKDO01	266	4396	4126	11/17/15	3/13/17	Scaffold	Columbia University Mailman School of Public Health	SAMN03813776	GCA_001445175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/175/GCA_001445175.1_ASM144517v1	-	001_13432
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.9992	39.7	-	CKJN01	86	2199	1947	3/21/15	3/11/17	Scaffold	SC	SAMEA1023894	GCA_001170385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/385/GCA_001170385.1_6631_5_2	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.22935	39.5	-	CREX01	69	2473	2228	3/23/15	3/11/17	Scaffold	SC	SAMEA1024830	GCA_001170405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/405/GCA_001170405.1_6731_6_24	-	SMRU1128
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.42681	65.5	-	LKIG01	268	4427	4146	11/17/15	3/13/17	Scaffold	Columbia University Mailman School of Public Health	SAMN03813794	GCA_001445275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/275/GCA_001445275.1_ASM144527v1	-	C49_20090
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.30672	50.3	-	NEMC01	128	5698	5269	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420126	GCA_002133435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/435/GCA_002133435.1_ASM213343v1	-	OLC996
Salmonella enterica subsp. enterica serovar Sandiego	1151002	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.83193	52.1	-	MXZT01	119	4930	4628	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368648	GCA_002063965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/965/GCA_002063965.1_ASM206396v1	-	BCW_2772
Staphylococcus aureus MRSN 2761	1410002	PRJNA223633	223633	Terrabacteria group	Firmicutes	2.85253	32.6	-	LBIF01	27	2981	2839	4/29/15	3/4/17	Contig	J. Craig Venter Institute	SAMN03486518	GCA_000982185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/185/GCA_000982185.1_ASM98218v1	-	MRSN 2761
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.78642	32.8	-	CHEJ01	31	2845	2711	4/21/15	3/4/17	Contig	SC	SAMEA1033375	GCA_000982735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/735/GCA_000982735.1_7092_7_82	-	BSAR58
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.71518	52.1	-	MXZV01	1258	5303	4392	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368646	GCA_002063995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/995/GCA_002063995.1_ASM206399v1	-	BCW_2770
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.04148	50.7	-	NEMG01	139	5353	4921	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420130	GCA_002133445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/445/GCA_002133445.1_ASM213344v1	-	OLC997
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.40382	65.6	-	LKIM01	273	4340	4107	11/17/15	3/13/17	Scaffold	Columbia University Mailman School of Public Health	SAMN03813801	GCA_001445375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/375/GCA_001445375.1_ASM144537v1	-	H6_12226
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.22978	39.6	-	CLZR01	75	2404	2150	3/21/15	3/11/17	Scaffold	SC	SAMEA1028661	GCA_001170425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/425/GCA_001170425.1_6983_8_91	-	SMRU2395
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.04298	39.7	-	CLWT01	58	2256	2034	3/21/15	3/10/17	Scaffold	SC	SAMEA1028787	GCA_001170445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/445/GCA_001170445.1_6983_5_15	-	SMRU2319
Mycobacterium tuberculosis	1773	PRJNA288586	288586	Terrabacteria group	Actinobacteria	4.36934	65.4	-	LKMI01	198	4350	4128	11/17/15	3/13/17	Scaffold	Columbia University Mailman School of Public Health	SAMN04129542	GCA_001445525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/525/GCA_001445525.1_ASM144552v1	-	C_913
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.14645	50.5	-	NEMH01	63	5358	5025	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420131	GCA_002133455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/455/GCA_002133455.1_ASM213345v1	-	OLC998
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.90509	52.1	-	MXZX01	62	4957	4654	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03357166	GCA_002064005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/005/GCA_002064005.1_ASM206400v1	-	BCW_2768
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87654	32.6	-	CHKO01	53	3025	2896	4/21/15	3/4/17	Contig	SC	SAMEA1324566	GCA_000982775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/775/GCA_000982775.1_7748_4_96	-	USFL094
Staphylococcus aureus	1280	PRJNA273780	273780	Terrabacteria group	Firmicutes	2.90647	32.7	-	JXUD01	83	3068	2874	4/30/15	3/4/17	Contig	Monash University	SAMN03295753	GCA_000982855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/855/GCA_000982855.1_ASM98285v1	26067951	APS210
Salmonella enterica subsp. enterica serovar Rissen	399587	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.00331	52	-	MXZY01	175	5178	4823	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368643	GCA_002064035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/035/GCA_002064035.1_ASM206403v1	-	BCW_2766
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	4.96087	50.7	-	NEMP01	99	5211	4873	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420139	GCA_002133505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/505/GCA_002133505.1_ASM213350v1	-	OLC988
Mycobacterium tuberculosis	1773	PRJNA298441	298441	Terrabacteria group	Actinobacteria	4.28257	65.4	-	LLXF01	234	4293	3987	12/15/15	8/28/17	Scaffold	University of Malaya	SAMN04159245	GCA_001468445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/445/GCA_001468445.1_ASM146844v1	-	UM-CSF01
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.04084	39.7	-	CLZK01	57	2249	2033	3/21/15	3/10/17	Scaffold	SC	SAMEA1028857	GCA_001170465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/465/GCA_001170465.1_6983_8_80	-	SMRU2384
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.09058	39.7	-	CMFX01	71	2333	2117	3/21/15	3/11/17	Scaffold	SC	SAMEA1028809	GCA_001170505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/505/GCA_001170505.1_7011_6_8	-	SMRU2816
Mycobacterium tuberculosis	1773	PRJNA298451	298451	Terrabacteria group	Actinobacteria	4.33892	65.6	-	LLXG01	138	4249	4023	12/15/15	8/28/17	Scaffold	University of Malaya	SAMN04159257	GCA_001468545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/545/GCA_001468545.1_ASM146854v1	-	UM-CSF05
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.332	50.3	-	NEMT01	108	5487	5150	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420143	GCA_002133515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/515/GCA_002133515.1_ASM213351v1	-	OLC992
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70796	52.2	-	MXZU01	136	4800	4541	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368647	GCA_002064045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/045/GCA_002064045.1_ASM206404v1	-	BCW_2771
Staphylococcus aureus	1280	PRJNA273780	273780	Terrabacteria group	Firmicutes	2.90531	32.7	-	JXUV01	72	3053	2874	4/30/15	3/4/17	Contig	Monash University	SAMN03295754	GCA_000982925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/925/GCA_000982925.1_ASM98292v1	26067951	APS211
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.92942	32.9	-	JXZH01	8	3078	2891	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255443	GCA_001018635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/635/GCA_001018635.1_ASM101863v1	-	1063
Salmonella enterica subsp. enterica serovar 6.8:eh:-	1967636	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.60031	52.1	-	MXZW01	1472	5279	4256	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368645	GCA_002064055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/055/GCA_002064055.1_ASM206405v1	-	BCW_2769
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.08661	50.8	-	NEMV01	235	5506	4908	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420145	GCA_002133525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/525/GCA_002133525.1_ASM213352v1	-	OLC1066
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.31003	65.4	-	CNGS01	165	4310	4032	3/22/15	3/13/17	Scaffold	SC	SAMEA1018916	GCA_001566015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/015/GCA_001566015.1_6540_5_20	-	Bir 230
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.13483	39.6	-	CKQZ01	56	2357	2136	3/21/15	3/10/17	Scaffold	SC	SAMEA1024876	GCA_001170545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/545/GCA_001170545.1_6680_7_5	-	SMRU965
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.15232	39.5	-	CRCB01	83	2392	2149	3/22/15	3/11/17	Scaffold	SC	SAMEA1024942	GCA_001170585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/585/GCA_001170585.1_6731_1_7	-	SMRU991
Mycobacterium tuberculosis	1773	PRJNA319891	319891	Terrabacteria group	Actinobacteria	4.35678	65.6	-	LXGF01	111	4255	4073	5/9/16	3/13/17	Scaffold	University of Malaya	SAMN04910113	GCA_001640645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/645/GCA_001640645.1_ASM164064v1	-	UM-CSF17
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.51605	50.4	-	NEMU01	186	5971	5481	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420144	GCA_002133535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/535/GCA_002133535.1_ASM213353v1	-	OLC993
Salmonella enterica subsp. enterica serovar Rissen	399587	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.87066	52	-	MXZZ01	330	5103	4645	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368642	GCA_002064085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/085/GCA_002064085.1_ASM206408v1	-	BCW_2765
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.8215	32.9	-	JXZG01	8	2941	2750	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255442	GCA_001018645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/645/GCA_001018645.1_ASM101864v1	-	MSSA476
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.7675	32.8	-	JXZJ01	3	2871	2718	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255445	GCA_001018655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/655/GCA_001018655.1_ASM101865v1	-	NRS106
Salmonella enterica subsp. enterica serovar Reading	165302	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.75892	52.3	-	MYAB01	128	4866	4619	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368640	GCA_002064115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/115/GCA_002064115.1_ASM206411v1	-	BCW_2763
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.16457	50.7	-	NEMX01	164	5480	5069	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420147	GCA_002133585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/585/GCA_002133585.1_ASM213358v1	-	OLC1073
Mycobacterium tuberculosis	1773	PRJNA319889	319889	Terrabacteria group	Actinobacteria	4.35586	65.6	-	LXGD01	103	4259	4071	5/9/16	3/13/17	Scaffold	University of Malaya	SAMN04910097	GCA_001640695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/695/GCA_001640695.1_ASM164069v1	-	UM-CSF09
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.18379	39.5	-	CRAN01	46	2378	2112	3/23/15	3/11/17	Scaffold	SC	SAMEA1024571	GCA_001170645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/645/GCA_001170645.1_6730_7_13	-	SMRU709
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12051	39.7	-	CLIB01	62	2368	2146	3/21/15	3/11/17	Scaffold	SC	SAMEA1026198	GCA_001170665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/665/GCA_001170665.1_6925_6_13	-	SMRU2197
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3974	65.6	-	MMEI01	39	4285	4101	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918960	GCA_001839715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/715/GCA_001839715.1_ASM183971v1	-	C0003187-3
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.15916	50.5	-	NEMZ01	134	5488	5055	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420149	GCA_002133595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/595/GCA_002133595.1_ASM213359v1	-	OLC1075
Salmonella enterica subsp. enterica serovar Java	224729	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.09697	52.1	-	MYAF01	99	5214	4916	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368636	GCA_002064125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/125/GCA_002064125.1_ASM206412v1	-	BCW_2759
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.81163	32.8	-	JXZI01	1	2957	2780	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255444	GCA_001018685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/685/GCA_001018685.1_ASM101868v1	-	TCH 959
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.77702	32.9	-	JXZO01	14	2910	2734	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255450	GCA_001018715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/715/GCA_001018715.1_ASM101871v1	-	NRS128
Salmonella enterica subsp. enterica serovar Java	224729	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70286	52.2	-	MYAG01	59	4768	4534	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368635	GCA_002064135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/135/GCA_002064135.1_ASM206413v1	-	BCW_2758
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.27139	50.4	-	NEND01	200	5776	5265	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420153	GCA_002133605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/605/GCA_002133605.1_ASM213360v1	-	OLC1067
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39947	65.6	-	MMEN01	65	4316	4099	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918955	GCA_001839805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/805/GCA_001839805.1_ASM183980v1	-	C0003200-4
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04054	39.6	-	CKEK01	68	2227	2001	3/21/15	3/11/17	Scaffold	SC	SAMEA1023762	GCA_001170745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/745/GCA_001170745.1_6630_2_19	-	7F
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.13088	39.5	-	CLZG01	74	2340	2102	3/21/15	3/11/17	Scaffold	SC	SAMEA1028919	GCA_001170765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/765/GCA_001170765.1_6983_8_85	-	SMRU2389
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40235	65.6	-	MMER01	23	4281	4095	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918951	GCA_001839885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/885/GCA_001839885.1_ASM183988v1	-	I0001119-2
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.46823	50.4	-	NENC01	249	6006	5444	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420152	GCA_002133615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/615/GCA_002133615.1_ASM213361v1	-	OLC1064
Salmonella enterica subsp. enterica serovar Panama	29472	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.76134	52.2	-	MYAJ01	403	5014	4509	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368632	GCA_002064145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/145/GCA_002064145.1_ASM206414v1	-	BCW_2755
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.90201	32.9	-	JXZN01	3	3122	2980	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255449	GCA_001018725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/725/GCA_001018725.1_ASM101872v1	-	NRS129
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.72574	32.8	-	JXZP01	2	2825	2689	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255451	GCA_001018735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/735/GCA_001018735.1_ASM101873v1	-	NRS137
Salmonella enterica subsp. enterica serovar Oritamerin	1967654	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.62129	52.3	-	MYAL01	81	4665	4428	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368630	GCA_002064195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/195/GCA_002064195.1_ASM206419v1	-	BCW_2753
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.30541	50.4	-	NENL01	228	5795	5299	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420161	GCA_002133665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/665/GCA_002133665.1_ASM213366v1	-	OLC2139
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39025	65.6	-	MMEW01	64	4290	4102	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918946	GCA_001839975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/975/GCA_001839975.1_ASM183997v1	-	I0000755-4
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08936	39.5	-	CKPX01	42	2293	2060	3/21/15	3/11/17	Scaffold	SC	SAMEA1025058	GCA_001170785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/785/GCA_001170785.1_6680_5_8	-	SMRU920
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11797	39.8	-	CMOA01	42	2338	2113	3/22/15	3/10/17	Scaffold	SC	SAMEA1964890	GCA_001170805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/805/GCA_001170805.1_9803_7_17	-	34
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.44278	65.6	-	MMEY01	19	4326	4142	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918944	GCA_001839985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/839/985/GCA_001839985.1_ASM183998v1	-	I0000558-2
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.12675	50.8	-	NENN01	211	5398	5001	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420163	GCA_002133675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/675/GCA_002133675.1_ASM213367v1	-	OLC2141
Salmonella enterica subsp. enterica serovar Oranienburg	28147	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.8497	52.1	-	MYAM01	158	5059	4747	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368629	GCA_002064215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/215/GCA_002064215.1_ASM206421v1	-	BCW_2752
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.76471	32.9	-	JXZR01	1	2878	2725	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255453	GCA_001018775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/775/GCA_001018775.1_ASM101877v1	-	NRS149
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.9025	32.8	-	JXZV01	4	3029	2855	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255457	GCA_001018795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/795/GCA_001018795.1_ASM101879v1	-	NRS281
Salmonella enterica subsp. enterica serovar Onireke	1967653	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69478	52.2	-	MYAO01	659	5060	4430	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368627	GCA_002064225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/225/GCA_002064225.1_ASM206422v1	-	BCW_2750
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.20121	50.5	-	NENK01	195	5594	5093	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420160	GCA_002133685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/685/GCA_002133685.1_ASM213368v1	-	OLC2138
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40725	65.6	-	MMFA01	27	4297	4103	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918942	GCA_001840045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/045/GCA_001840045.1_ASM184004v1	-	I0000406-4
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.24845	39.5	-	CLWB01	65	2450	2156	3/21/15	3/11/17	Scaffold	SC	SAMEA1025946	GCA_001170845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/845/GCA_001170845.1_6983_4_84	-	SMRU2292
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.20844	39.4	-	CLPT01	96	2450	2213	3/21/15	3/11/17	Scaffold	SC	SAMEA1028605	GCA_001170865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/865/GCA_001170865.1_6949_3_8	-	SMRU2456
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35349	65.6	-	MMFB01	14	4253	4081	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918941	GCA_001840065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/065/GCA_001840065.1_ASM184006v1	-	I0000537-6
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.35383	50.3	-	NENS01	209	5851	5337	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420168	GCA_002133695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/695/GCA_002133695.1_ASM213369v1	-	OLC1250
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.68271	52.1	-	MYAP01	1093	5239	4350	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368626	GCA_002064235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/235/GCA_002064235.1_ASM206423v1	-	BCW_2749
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.87902	32.8	-	JXZW01	2	2996	2797	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255458	GCA_001018835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/835/GCA_001018835.1_ASM101883v1	-	NRS271
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.88124	32.9	-	JXZY01	1	2991	2791	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255460	GCA_001018845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/845/GCA_001018845.1_ASM101884v1	-	NRS153
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.86072	52.1	-	MYAS01	88	5001	4736	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368623	GCA_002064275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/275/GCA_002064275.1_ASM206427v1	-	BCW_2746
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.56209	50.4	-	NENZ01	254	6168	5670	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420175	GCA_002133745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/745/GCA_002133745.1_ASM213374v1	-	OLC1257
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41915	65.6	-	MMFC01	24	4305	4122	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918940	GCA_001840075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/075/GCA_001840075.1_ASM184007v1	-	I0000698-6
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10314	39.6	-	CKWH01	61	2355	2107	3/21/15	3/10/17	Scaffold	SC	SAMEA1026064	GCA_001170965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/965/GCA_001170965.1_6823_5_23	-	SMRU1967
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11722	39.5	-	CLEH01	68	2336	2108	3/21/15	3/10/17	Scaffold	SC	SAMEA1025692	GCA_001171005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/005/GCA_001171005.1_6899_6_18	-	SMRU2082
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40841	65.6	-	MMFH01	12	4277	4108	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918935	GCA_001840205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/205/GCA_001840205.1_ASM184020v1	-	I0000555-8
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.33155	50.6	-	NENX01	186	5838	5369	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420173	GCA_002133755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/755/GCA_002133755.1_ASM213375v1	-	OLC1255
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.67933	52.1	-	MYAQ01	872	5155	4355	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368625	GCA_002064285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/285/GCA_002064285.1_ASM206428v1	-	BCW_2748
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.98477	32.9	-	JXZZ01	4	3164	3003	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255461	GCA_001018875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/875/GCA_001018875.1_ASM101887v1	-	NRS127
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.82799	32.9	-	JYAA01	2	3001	2842	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255462	GCA_001018885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/885/GCA_001018885.1_ASM101888v1	-	NRS131
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80369	52.1	-	MYAT01	522	5135	4572	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368622	GCA_002064305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/305/GCA_002064305.1_ASM206430v1	-	BCW_2745
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	4.75821	50.6	-	NEOB01	71	4965	4575	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420177	GCA_002133765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/765/GCA_002133765.1_ASM213376v1	-	OLC1259
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41186	65.6	-	MMFQ01	35	4302	4123	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918926	GCA_001840385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/385/GCA_001840385.1_ASM184038v1	-	I0000049-2
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.12257	39.7	-	CMWL01	126	2218	1992	3/22/15	3/10/17	Scaffold	SC	SAMEA1022791	GCA_001171045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/045/GCA_001171045.1_5919_1_10	-	128
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.1644	39.6	-	CREC01	89	2416	2174	3/23/15	3/10/17	Scaffold	SC	SAMEA1024948	GCA_001171145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/145/GCA_001171145.1_6731_5_13	-	SMRU1093
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38866	65.6	-	MMFT01	48	4292	4119	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918923	GCA_001840435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/840/435/GCA_001840435.1_ASM184043v1	-	I0000023-7
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.35673	50.2	-	NEOG01	146	5779	5317	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420182	GCA_002133775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/775/GCA_002133775.1_ASM213377v1	-	OLC1264
Salmonella enterica subsp. enterica serovar Muenster	82689	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.74098	52.1	-	MYAX01	66	4843	4600	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368616	GCA_002064315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/315/GCA_002064315.1_ASM206431v1	-	BCW_2739
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.82595	32.8	-	JYAD01	3	2930	2764	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255465	GCA_001018905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/905/GCA_001018905.1_ASM101890v1	-	NRS387
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.74033	32.8	-	JYAE01	1	2869	2725	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255466	GCA_001018915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/915/GCA_001018915.1_ASM101891v1	-	NRS133
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.86376	51.9	-	MYBA01	292	5131	4713	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368613	GCA_002064355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/355/GCA_002064355.1_ASM206435v1	-	BCW_2736
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.46368	50.6	-	NEOI01	209	5945	5453	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420184	GCA_002133825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/825/GCA_002133825.1_ASM213382v1	-	OLC1266
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40383	65.6	-	MMHM01	6	4277	4108	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05915255	GCA_001841345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/841/345/GCA_001841345.1_ASM184134v1	-	00-R1208
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09878	39.7	-	CRKQ01	64	2295	2037	3/22/15	3/11/17	Scaffold	SC	SAMEA1025151	GCA_001171205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/205/GCA_001171205.1_6753_4_12	-	SMRU1548
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.07764	39.7	-	CKWS01	70	2273	2080	3/21/15	3/4/17	Scaffold	SC	SAMEA1026148	GCA_001171285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/285/GCA_001171285.1_6823_5_6	-	SMRU1950
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.4031	65.6	-	MMLN01	10	4275	4108	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918545	GCA_001842415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/415/GCA_001842415.1_ASM184241v1	-	00-R0178
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.24885	50.6	-	NEMD01	129	5555	5161	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420127	GCA_002133835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/835/GCA_002133835.1_ASM213383v1	-	OLC1002
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.67345	52.2	-	MYAZ01	41	4761	4531	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368614	GCA_002064365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/365/GCA_002064365.1_ASM206436v1	-	BCW_2737
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.82762	32.9	-	JYAF01	2	2997	2859	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255467	GCA_001018955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/955/GCA_001018955.1_ASM101895v1	-	NRS134
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.92208	32.9	-	JYAG01	2	3064	2863	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255468	GCA_001018965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/965/GCA_001018965.1_ASM101896v1	-	NRS22
Salmonella enterica subsp. enterica serovar Minnesota	70803	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.50385	52.3	-	MYBD01	58	4506	4279	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368610	GCA_002064375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/375/GCA_002064375.1_ASM206437v1	-	BCW_2733
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.26434	50.4	-	NEOK01	158	5733	5288	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420186	GCA_002133845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/845/GCA_002133845.1_ASM213384v1	-	OLC1268
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40224	65.6	-	MMLK01	17	4281	4112	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918548	GCA_001842505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/505/GCA_001842505.1_ASM184250v1	-	00-R1399
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.16377	39.5	-	CKJJ01	44	2407	2179	3/21/15	3/4/17	Scaffold	SC	SAMEA1023914	GCA_001171325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/325/GCA_001171325.1_6631_5_16	-	23F
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.09231	39.6	-	CREM01	74	2254	2036	3/23/15	3/4/17	Scaffold	SC	SAMEA1024716	GCA_001171365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/365/GCA_001171365.1_6731_6_1	-	SMRU1105
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40906	65.6	-	MMLV01	22	4296	4123	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918537	GCA_001842585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/585/GCA_001842585.1_ASM184258v1	-	I0001547-4
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.29095	50.4	-	NEME01	89	5427	5080	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420128	GCA_002133855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/855/GCA_002133855.1_ASM213385v1	-	OLC1000
Salmonella enterica subsp. enterica serovar Mgulani	1151181	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.67175	52.2	-	MYBE01	78	4757	4506	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368609	GCA_002064405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/405/GCA_002064405.1_ASM206440v1	-	BCW_2732
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.86166	32.8	-	JYAH01	1	2978	2781	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255469	GCA_001018975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/975/GCA_001018975.1_ASM101897v1	-	NRS143
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.80262	32.9	-	JYAI01	5	2922	2756	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255470	GCA_001019015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/015/GCA_001019015.1_ASM101901v1	-	NRS136
Salmonella enterica subsp. enterica serovar Mbandaka	192954	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70717	52.2	-	MYBF01	47	4780	4543	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368608	GCA_002064435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/435/GCA_002064435.1_ASM206443v1	-	BCW_2731
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.19684	50.4	-	NEMI01	134	5538	4987	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420132	GCA_002133905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/905/GCA_002133905.1_ASM213390v1	-	OLC1003
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40553	65.6	-	MMLR01	10	4287	4115	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918541	GCA_001842595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/595/GCA_001842595.1_ASM184259v1	-	I0002124-1
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.27666	39.6	-	CLOF01	48	2529	2278	3/21/15	3/4/17	Scaffold	SC	SAMEA1029164	GCA_001171385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/385/GCA_001171385.1_6949_2_10	-	SMRU2434
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.0783	39.9	-	CPOF01	144	2283	2054	3/23/15	3/4/17	Scaffold	SC	SAMEA682285	GCA_001171445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/445/GCA_001171445.1_5381_2_1	-	09B03385
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38302	65.6	-	MMLX01	27	4262	4085	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918535	GCA_001842615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/615/GCA_001842615.1_ASM184261v1	-	C0003444-8
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.07369	50.6	-	NEMF01	96	5373	4976	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420129	GCA_002133915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/915/GCA_002133915.1_ASM213391v1	-	OLC994
Salmonella enterica subsp. enterica serovar Mbandaka	192954	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.71056	52.1	-	MYBG01	39	4793	4550	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368607	GCA_002064445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/445/GCA_002064445.1_ASM206444v1	-	BCW_2730
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.83279	32.8	-	JYAL01	1	2955	2776	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255473	GCA_001019035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/035/GCA_001019035.1_ASM101903v1	-	NRS105
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.83388	32.9	-	JYAN01	4	2967	2772	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255475	GCA_001019045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/045/GCA_001019045.1_ASM101904v1	-	NRS158
Salmonella enterica subsp. enterica serovar Mbandaka	192954	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.78876	52	-	MYBI01	73	4895	4643	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368605	GCA_002064455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/455/GCA_002064455.1_ASM206445v1	-	BCW_2728
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.44958	50.5	-	NEML01	238	5924	5427	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420135	GCA_002133925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/925/GCA_002133925.1_ASM213392v1	-	OLC984
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40108	65.6	-	MMMG01	13	4274	4112	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918526	GCA_001842825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/825/GCA_001842825.1_ASM184282v1	-	I0000015-3
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.1151	39.6	-	CRBN01	48	2302	2093	3/23/15	3/4/17	Scaffold	SC	SAMEA1025056	GCA_001171465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/465/GCA_001171465.1_6730_8_4	-	SMRU724
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.24008	39.6	-	CKLF01	82	2447	2187	3/21/15	3/4/17	Scaffold	SC	SAMEA1023739	GCA_001171505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/505/GCA_001171505.1_6641_6_14	-	type strain: N
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38367	65.6	-	MMLE01	16	4271	4093	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918554	GCA_001842865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/865/GCA_001842865.1_ASM184286v1	-	02-R1324
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	4.93875	50.5	-	NEMM01	98	5275	4854	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420136	GCA_002133935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/935/GCA_002133935.1_ASM213393v1	-	OLC985
Salmonella enterica subsp. enterica serovar Mbandaka	192954	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.82924	52.2	-	MYBH01	79	4972	4700	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368606	GCA_002064495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/495/GCA_002064495.1_ASM206449v1	-	BCW_2729
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.84444	32.8	-	JYAP01	5	2960	2789	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255477	GCA_001019055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/055/GCA_001019055.1_ASM101905v1	-	VRSA 3a
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	3.01243	32.9	-	JYAO01	7	3143	2965	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255476	GCA_001019065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/065/GCA_001019065.1_ASM101906v1	-	NRS2
Salmonella enterica subsp. enterica serovar London	149390	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.48488	52.2	-	MYBL01	66	4517	4311	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368602	GCA_002064515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/515/GCA_002064515.1_ASM206451v1	-	BCW_2725
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.3186	50.6	-	NEMO01	202	5822	5355	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420138	GCA_002133985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/985/GCA_002133985.1_ASM213398v1	-	OLC987
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41885	65.6	-	MMLB01	17	4293	4134	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918557	GCA_001842915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/915/GCA_001842915.1_ASM184291v1	-	99-R576
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.09244	39.5	-	CRLL01	62	2301	2067	3/22/15	3/4/17	Scaffold	SC	SAMEA1024979	GCA_001171525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/525/GCA_001171525.1_6755_1_19	-	SMRU787
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.22749	39.4	-	CLHV01	92	2458	2205	3/21/15	3/4/17	Scaffold	SC	SAMEA1026073	GCA_001171545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/545/GCA_001171545.1_6925_5_8	-	SMRU2168
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39328	65.6	-	MMLA01	26	4287	4113	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918558	GCA_001842945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/842/945/GCA_001842945.1_ASM184294v1	-	99-R756
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.40264	50.3	-	NEMS01	137	5687	5214	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420142	GCA_002133995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/133/995/GCA_002133995.1_ASM213399v1	-	OLC991
Salmonella enterica subsp. enterica serovar Litchfield	486998	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.68088	52.2	-	MYBM01	57	4742	4513	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368601	GCA_002064525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/525/GCA_002064525.1_ASM206452v1	-	BCW_2724
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.59817	32.7	-	JYAQ01	6	2557	2373	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255478	GCA_001019115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/115/GCA_001019115.1_ASM101911v1	-	NRS178
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.83911	32.9	-	JYAU01	2	2954	2786	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255482	GCA_001019125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/125/GCA_001019125.1_ASM101912v1	-	Mw2
Salmonella enterica subsp. enterica serovar Manhattan	340189	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.59853	52.2	-	MYBK01	41	4627	4407	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368603	GCA_002064535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/535/GCA_002064535.1_ASM206453v1	-	BCW_2726
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.08781	50.4	-	NEMY01	133	5504	5035	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420148	GCA_002134005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/005/GCA_002134005.1_ASM213400v1	-	OLC1074
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39348	65.6	-	MMKW01	44	4286	4092	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918562	GCA_001843025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/025/GCA_001843025.1_ASM184302v1	-	99-R892
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.18173	39.7	-	CLQM01	61	2381	2134	3/21/15	3/4/17	Scaffold	SC	SAMEA1029171	GCA_001171565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/565/GCA_001171565.1_6949_4_17	-	SMRU2489
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.37878	40	-	CLCB01	108	2659	2302	3/21/15	3/4/17	Scaffold	SC	SAMEA1025894	GCA_001171605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/605/GCA_001171605.1_6871_2_15	-	SMRU1839
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39812	65.6	-	MMKU01	11	4273	4101	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918564	GCA_001843055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/055/GCA_001843055.1_ASM184305v1	-	99-R993
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.40265	50.5	-	NENA01	151	5800	5367	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420150	GCA_002134035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/035/GCA_002134035.1_ASM213403v1	-	OLC1061
Salmonella enterica subsp. enterica serovar Litchfield	486998	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.73721	52.2	-	MYBN01	56	4811	4578	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368600	GCA_002064575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/575/GCA_002064575.1_ASM206457v1	-	BCW_2723
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	3.02713	32.9	-	JYAS01	6	3223	3040	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255480	GCA_001019135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/135/GCA_001019135.1_ASM101913v1	-	NRS408
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.93891	32.8	-	JYAW01	15	3062	2813	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255484	GCA_001019175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/175/GCA_001019175.1_ASM101917v1	-	HAR21
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.81881	52.2	-	MYBO01	65	4887	4630	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368599	GCA_002064595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/595/GCA_002064595.1_ASM206459v1	-	BCW_2722
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.37054	50.3	-	NENH01	184	5797	5358	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420157	GCA_002134065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/065/GCA_002134065.1_ASM213406v1	-	OLC2135
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41415	65.6	-	MMEF01	26	4307	4122	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05919547	GCA_001843085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/085/GCA_001843085.1_ASM184308v1	-	I0001384-2
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11528	39.7	-	CMNO01	68	2359	2131	3/23/15	3/4/17	Scaffold	SC	SAMEA1029452	GCA_001171705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/705/GCA_001171705.1_7092_6_7	-	SMRU3103
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10935	39.5	-	CRRA01	89	2319	2083	3/22/15	3/4/17	Scaffold	SC	SAMEA1025087	GCA_001171745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/745/GCA_001171745.1_6791_6_7	-	SMRU631
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3987	65.6	-	MLZM01	28	4280	4109	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05919671	GCA_001843095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/095/GCA_001843095.1_ASM184309v1	-	I0003342-8
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.11714	50.6	-	NENI01	159	5511	5050	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420158	GCA_002134075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/075/GCA_002134075.1_ASM213407v1	-	OLC2136
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.81852	52.2	-	MYBP01	71	4893	4628	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368598	GCA_002064615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/615/GCA_002064615.1_ASM206461v1	-	BCW_2721
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	3.03875	32.8	-	JYBA01	13	3225	3023	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255488	GCA_001019195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/195/GCA_001019195.1_ASM101919v1	-	BK2529
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.85804	32.9	-	JYAZ01	5	3003	2822	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255487	GCA_001019205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/205/GCA_001019205.1_ASM101920v1	-	HDE288
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80145	52.2	-	MYBT01	48	4876	4619	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368593	GCA_002064625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/625/GCA_002064625.1_ASM206462v1	-	BCW_2716
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.16058	50.6	-	NENF01	115	5473	5068	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420155	GCA_002134085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/085/GCA_002134085.1_ASM213408v1	-	OLC2133
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40622	65.6	-	MMDV01	22	4291	4112	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05919557	GCA_001843475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/475/GCA_001843475.1_ASM184347v1	-	I0001703-3
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.16743	39.9	-	CMKS01	135	2328	2090	3/23/15	3/4/17	Scaffold	SC	SAMEA1029436	GCA_001171765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/765/GCA_001171765.1_7054_4_6	-	SMRU3030
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.13316	39.6	-	CMRC01	71	2300	2036	3/22/15	3/4/17	Scaffold	SC	SAMEA2062160	GCA_001171805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/805/GCA_001171805.1_9803_8_27	-	type strain: N
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40075	65.6	-	MMDR01	32	4297	4120	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05919561	GCA_001843565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/843/565/GCA_001843565.1_ASM184356v1	-	I0001800-7
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.34506	50.3	-	NENG01	193	5784	5310	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420156	GCA_002134105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/105/GCA_002134105.1_ASM213410v1	-	OLC2134
Salmonella enterica subsp. enterica serovar Kedougou	358771	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.76633	52	-	MYBV01	264	4888	4543	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368591	GCA_002064635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/635/GCA_002064635.1_ASM206463v1	-	L00102-08
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.92876	32.9	-	JYBB01	4	3103	2911	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255489	GCA_001019215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/215/GCA_001019215.1_ASM101921v1	-	NRS402
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.8588	32.9	-	JXZF01	7	3001	2810	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255441	GCA_001019255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/255/GCA_001019255.1_ASM101925v1	-	HDE288
Salmonella enterica subsp. enterica serovar Kedougou	358771	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.76682	52.1	-	MYBW01	85	4826	4570	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368590	GCA_002064645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/645/GCA_002064645.1_ASM206464v1	-	BCW_2713
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.39805	50.4	-	NENJ01	213	5959	5389	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420159	GCA_002134145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/145/GCA_002134145.1_ASM213414v1	-	OLC2137
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40394	65.6	-	MLZY01	15	4286	4112	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05919659	GCA_001844005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/005/GCA_001844005.1_ASM184400v1	-	I0005416-8
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.26227	39.9	-	CRTV01	43	2480	2251	3/23/15	3/10/17	Scaffold	SC	SAMEA1025456	GCA_001171825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/825/GCA_001171825.1_6805_5_1	-	SMRU1681
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08797	39.7	-	CKPK01	55	2305	2099	3/21/15	3/10/17	Scaffold	SC	SAMEA1024631	GCA_001171865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/865/GCA_001171865.1_6680_5_17	-	SMRU929
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40581	65.6	-	MMCQ01	8	4291	4116	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05919588	GCA_001844195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/195/GCA_001844195.1_ASM184419v1	-	I0003552-2
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	4.80748	50.7	-	NENM01	114	5093	4746	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420162	GCA_002134155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/155/GCA_002134155.1_ASM213415v1	-	OLC2140
Salmonella enterica subsp. enterica serovar Kedougou	358771	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.77086	52.1	-	MYBX01	99	4839	4570	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368589	GCA_002064695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/695/GCA_002064695.1_ASM206469v1	-	BCW_2712
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.72907	32.8	-	JXZK01	2	2825	2683	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255446	GCA_001019275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/275/GCA_001019275.1_ASM101927v1	-	NRS107
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	3.00401	32.9	-	JXZL01	11	3172	2972	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255447	GCA_001019295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/295/GCA_001019295.1_ASM101929v1	-	NRS108
Salmonella enterica subsp. enterica serovar Javiana	363569	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.53352	52.1	-	MYCC01	39	4606	4355	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368584	GCA_002064715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/715/GCA_002064715.1_ASM206471v1	-	BCW_2707
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.1478	50.4	-	NENU01	179	5510	5033	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420170	GCA_002134175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/175/GCA_002134175.1_ASM213417v1	-	OLC1252
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.4325	65.6	-	MMCD01	22	4326	4142	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05919601	GCA_001844465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/465/GCA_001844465.1_ASM184446v1	-	I0003504-3
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.16056	39.6	-	CKDN01	106	2381	2144	3/21/15	3/14/17	Scaffold	SC	SAMEA1023954	GCA_001171945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/945/GCA_001171945.1_6630_1_11	-	23A
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.13799	39.5	-	CRVL01	49	2333	2109	3/22/15	3/10/17	Scaffold	SC	SAMEA1025717	GCA_001171985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/985/GCA_001171985.1_6805_7_19	-	SMRU1748
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3942	65.6	-	MMCB01	28	4287	4091	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05919603	GCA_001844505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/505/GCA_001844505.1_ASM184450v1	-	C0002887-9
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	4.92956	50.6	-	NEOJ01	114	5280	4893	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420185	GCA_002134205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/205/GCA_002134205.1_ASM213420v1	-	OLC1267
Salmonella enterica subsp. enterica serovar Kedougou	358771	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.82173	52	-	MYBY01	200	4980	4648	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368588	GCA_002064725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/725/GCA_002064725.1_ASM206472v1	-	BCW_2711
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.81466	32.8	-	JXZM01	1	2910	2737	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255448	GCA_001019305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/305/GCA_001019305.1_ASM101930v1	-	NRS70
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.83662	32.9	-	JXZQ01	3	3004	2869	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255452	GCA_001019335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/335/GCA_001019335.1_ASM101933v1	-	NRS142
Salmonella enterica subsp. enterica serovar Jukestown	1967647	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.79	52.1	-	MYCB01	51	4817	4557	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368585	GCA_002064755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/755/GCA_002064755.1_ASM206475v1	-	BCW_2708
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.40282	50.3	-	NEOL01	156	5675	5221	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420187	GCA_002134215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/215/GCA_002134215.1_ASM213421v1	-	OLC1269
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39797	65.6	-	MMBI01	15	4276	4109	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05919623	GCA_001844925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/925/GCA_001844925.1_ASM184492v1	-	I0003707-2
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.15778	39.6	-	CRPA01	71	2365	2125	3/23/15	3/14/17	Scaffold	SC	SAMEA1025644	GCA_001172065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/065/GCA_001172065.1_6755_6_3	-	SMRU1179
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.11488	39.4	-	CRNX01	132	2294	2066	3/22/15	3/11/17	Scaffold	SC	SAMEA1025145	GCA_001172205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/205/GCA_001172205.1_6755_5_1	-	SMRU1153
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39226	65.6	-	MMBF01	11	4262	4097	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05919626	GCA_001844955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/955/GCA_001844955.1_ASM184495v1	-	I0003213-1
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.26875	50.7	-	NEON01	145	5657	5253	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420189	GCA_002134235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/235/GCA_002134235.1_ASM213423v1	-	OLC1065
Salmonella enterica subsp. enterica serovar Javiana	363569	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.61899	52.2	-	MYCD01	38	4732	4478	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368583	GCA_002064765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/765/GCA_002064765.1_ASM206476v1	-	BCW_2706
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.74361	33	-	JXZT01	3	2835	2582	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255455	GCA_001019355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/355/GCA_001019355.1_ASM101935v1	-	NRS155
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.79051	33	-	JXZU01	10	2898	2642	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255456	GCA_001019375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/375/GCA_001019375.1_ASM101937v1	-	NRS156
Salmonella enterica subsp. enterica serovar Istanbul	1160750	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.82876	52.2	-	MYCF01	76	4958	4701	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368581	GCA_002064795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/795/GCA_002064795.1_ASM206479v1	-	BCW_2704
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.06504	50.6	-	NEOQ01	156	5455	4958	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420192	GCA_002134265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/265/GCA_002134265.1_ASM213426v1	-	OLC1071
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41037	65.6	-	MMBG01	14	4295	4120	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05919625	GCA_001844995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/844/995/GCA_001844995.1_ASM184499v1	-	I0003270-1
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05105	39.8	-	CMEM01	74	2257	2050	3/21/15	3/10/17	Scaffold	SC	SAMEA1028652	GCA_001172245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/245/GCA_001172245.1_7011_5_11	-	SMRU2795
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.22901	39.4	-	CMAY01	104	2464	2224	3/21/15	3/10/17	Scaffold	SC	SAMEA1029079	GCA_001172265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/265/GCA_001172265.1_7004_6_33	-	SMRU2841
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3957	65.6	-	MMBC01	10	4283	4100	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05919629	GCA_001845085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/085/GCA_001845085.1_ASM184508v1	-	I0003630-6
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.42673	50.4	-	NEMJ01	173	5961	5481	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420133	GCA_002134275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/275/GCA_002134275.1_ASM213427v1	-	OLC1001
Salmonella enterica subsp. enterica serovar Itami	1160751	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66509	52.2	-	MYCE01	61	4788	4473	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368582	GCA_002064815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/815/GCA_002064815.1_ASM206481v1	-	BCW_2705
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.81826	32.9	-	JXZX01	1	2898	2698	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255459	GCA_001019395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/395/GCA_001019395.1_ASM101939v1	-	NRS484
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.69749	32.8	-	JYAB01	1	2787	2653	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255463	GCA_001019415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/415/GCA_001019415.1_ASM101941v1	-	NRS146
Salmonella enterica subsp. enterica serovar Isangi	1386015	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.64712	52.3	-	MYCG01	51	4694	4457	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368580	GCA_002064825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/825/GCA_002064825.1_ASM206482v1	-	BCW_2703
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.31818	50.2	-	NEMN01	146	5709	5272	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420137	GCA_002134285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/285/GCA_002134285.1_ASM213428v1	-	OLC986
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38866	65.6	-	MMAX01	24	4273	4114	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05919634	GCA_001845105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/105/GCA_001845105.1_ASM184510v1	-	I0004078-7
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.058	39.7	-	CMEU01	73	2272	2056	3/21/15	3/11/17	Scaffold	SC	SAMEA1028877	GCA_001172405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/405/GCA_001172405.1_7011_5_24	-	SMRU2808
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.26269	39.4	-	CKXP01	77	2525	2242	3/21/15	3/11/17	Scaffold	SC	SAMEA1026244	GCA_001172425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/425/GCA_001172425.1_6823_6_6	-	SMRU1974
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40472	65.6	-	MMAZ01	13	4286	4111	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05919632	GCA_001845145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/145/GCA_001845145.1_ASM184514v1	-	I0003819-5
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.1925	50.4	-	NEMR01	129	5517	4978	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420141	GCA_002134325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/325/GCA_002134325.1_ASM213432v1	-	OLC990
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.94492	52.1	-	MYCH01	78	5037	4743	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368579	GCA_002064835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/835/GCA_002064835.1_ASM206483v1	-	BCW_2702
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.87849	32.9	-	JYAC01	1	3009	2838	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255464	GCA_001019435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/435/GCA_001019435.1_ASM101943v1	-	NRS1
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.8835	33	-	JYAJ01	9	3009	2795	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255471	GCA_001019455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/455/GCA_001019455.1_ASM101945v1	-	NRS104
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.65977	52.3	-	MYCI01	45	4716	4500	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368578	GCA_002064875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/875/GCA_002064875.1_ASM206487v1	-	BCW_2701
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.17032	50.6	-	NEMQ01	163	5466	5044	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420140	GCA_002134335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/335/GCA_002134335.1_ASM213433v1	-	OLC989
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39296	65.6	-	MMAN01	18	4263	4097	10/25/16	3/13/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05919644	GCA_001845325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/325/GCA_001845325.1_ASM184532v1	-	I0004765-9
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.02819	39.6	-	CRSN01	52	2219	2006	3/23/15	3/10/17	Scaffold	SC	SAMEA1025322	GCA_001172445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/445/GCA_001172445.1_6805_3_1	-	SMRU1441
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.1457	39.5	-	CLOL01	63	2361	2137	3/21/15	3/10/17	Scaffold	SC	SAMEA1029043	GCA_001172665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/665/GCA_001172665.1_6949_2_2	-	SMRU2426
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40144	65.6	-	MMAO01	47	4304	4095	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05919643	GCA_001845335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/335/GCA_001845335.1_ASM184533v1	-	I0003120-8
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.25925	50.6	-	NEMW01	134	5614	5189	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420146	GCA_002134345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/345/GCA_002134345.1_ASM213434v1	-	OLC1072
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66408	52.3	-	MYCJ01	51	4726	4504	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368577	GCA_002064895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/895/GCA_002064895.1_ASM206489v1	-	BCW_2700
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.7385	32.8	-	JYAK01	3	2839	2684	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255472	GCA_001019475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/475/GCA_001019475.1_ASM101947v1	-	NRS140
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.95588	32.8	-	JYAM01	1	3147	2980	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255474	GCA_001019485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/485/GCA_001019485.1_ASM101948v1	-	NRS120
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.68564	52.2	-	MYCK01	86	4776	4530	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368576	GCA_002064905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/905/GCA_002064905.1_ASM206490v1	-	BCW_2699
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.50341	50.3	-	NENE01	143	5991	5517	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420154	GCA_002134385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/385/GCA_002134385.1_ASM213438v1	-	OLC1068
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40804	65.6	-	MMAP01	19	4298	4122	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05919642	GCA_001845345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/345/GCA_001845345.1_ASM184534v1	-	I0004556-2
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.0784	39.5	-	CLYW01	54	2283	2032	3/21/15	3/10/17	Scaffold	SC	SAMEA1029127	GCA_001172685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/685/GCA_001172685.1_6983_7_64	-	SMRU2368
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.17554	39.4	-	CMAL01	62	2413	2178	3/21/15	3/4/17	Scaffold	SC	SAMEA1028609	GCA_001172805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/805/GCA_001172805.1_7004_5_6	-	SMRU2862
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39178	65.6	-	MMAI01	26	4270	4099	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05919649	GCA_001845435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/435/GCA_001845435.1_ASM184543v1	-	I0004766-7
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.5078	50.4	-	NENO01	178	5813	5400	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420164	GCA_002134395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/395/GCA_002134395.1_ASM213439v1	-	OLC2142
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.85577	52.1	-	MYCM01	55	4969	4738	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368574	GCA_002064935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/935/GCA_002064935.1_ASM206493v1	-	BCW_2697
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.90328	32.9	-	JYAR01	3	3040	2877	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255479	GCA_001019495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/495/GCA_001019495.1_ASM101949v1	-	NRS1
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.81933	32.8	-	JYAT01	1	2935	2780	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255481	GCA_001019535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/535/GCA_001019535.1_ASM101953v1	-	Mw2
Salmonella enterica subsp. enterica serovar Havana	179997	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70899	52.2	-	MYCO01	51	4773	4522	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368572	GCA_002064955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/955/GCA_002064955.1_ASM206495v1	-	BCW_2695
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.14786	50.6	-	NENB01	167	5569	5121	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420151	GCA_002134405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/405/GCA_002134405.1_ASM213440v1	-	OLC1062
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41714	65.6	-	MMAJ01	13	4291	4131	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05919648	GCA_001845455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/455/GCA_001845455.1_ASM184545v1	-	I0004816-0
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.28051	39.5	-	CPSE01	600	2435	2167	3/22/15	3/4/17	Scaffold	SC	SAMEA1020784	GCA_001172925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/925/GCA_001172925.1_6259_4_8	-	SN11907
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08322	39.7	-	CLYK01	62	2309	2086	3/21/15	3/4/17	Scaffold	SC	SAMEA1029133	GCA_001172965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/965/GCA_001172965.1_6983_7_50	-	SMRU2354
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.4075	65.6	-	MLZS01	13	4273	4104	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05919665	GCA_001845585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/585/GCA_001845585.1_ASM184558v1	-	I0004746-9
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.24205	50.4	-	NENP01	177	5634	5186	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420165	GCA_002134445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/445/GCA_002134445.1_ASM213444v1	-	OLC1059
Salmonella enterica subsp. enterica serovar Havana	179997	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70241	52.2	-	MYCN01	56	4735	4485	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368573	GCA_002064965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/965/GCA_002064965.1_ASM206496v1	-	BCW_2696
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.97643	32.9	-	JYAX01	2	3153	2999	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255485	GCA_001019565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/565/GCA_001019565.1_ASM101956v1	-	E2125
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.9014	32.9	-	JYAY01	2	3064	2884	6/2/15	3/4/17	Contig	US Food and Drug Administration 	SAMN03255486	GCA_001019575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/575/GCA_001019575.1_ASM101957v1	-	HPV107
Salmonella enterica subsp. enterica serovar Havana	179997	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.71148	52.2	-	MYCP01	68	4748	4493	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368571	GCA_002064975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/064/975/GCA_002064975.1_ASM206497v1	-	BCW_2694
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.11528	50.7	-	NENT01	135	5389	4999	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420169	GCA_002134455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/455/GCA_002134455.1_ASM213445v1	-	OLC1251
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41076	65.6	-	MLZN01	22	4299	4131	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05919670	GCA_001845595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/595/GCA_001845595.1_ASM184559v1	-	I0005975-3
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12259	39.5	-	CRNN01	44	2365	2121	3/22/15	3/4/17	Scaffold	SC	SAMEA1024945	GCA_001172985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/985/GCA_001172985.1_6755_4_21	-	SMRU1149
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.17432	39.6	-	CPMZ01	75	2400	2155	3/23/15	3/4/17	Scaffold	SC	SAMEA1408250	GCA_001173005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/005/GCA_001173005.1_7444_8_54	-	0108+03050
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39521	65.6	-	MMQO01	13	4285	4102	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918719	GCA_001845635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/635/GCA_001845635.1_ASM184563v1	-	06-R0222
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.00709	50.7	-	NENQ01	71	5216	4906	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420166	GCA_002134465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/465/GCA_002134465.1_ASM213446v1	-	OLC1060
Salmonella enterica subsp. enterica serovar Haifa	192956	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.93464	51.9	-	MYCR01	88	5037	4817	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368569	GCA_002065015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/015/GCA_002065015.1_ASM206501v1	-	BCW_2691
Staphylococcus aureus subsp. aureus	46170	PRJNA284620	284620	Terrabacteria group	Firmicutes	2.83042	32.7691	plasmid pSA-B6-1:NZ_CM003311.1/CM003311.1	LDIT01	71	2991	2739	6/10/15	3/4/17	Contig	Santa Clara University	SAMN03704076	GCA_001026765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/765/GCA_001026765.1_ASM102676v1	26294626	B6
Staphylococcus aureus subsp. aureus	46170	PRJNA266306	266306	Terrabacteria group	Firmicutes	2.76647	32.7	-	JTFJ01	86	2882	2718	7/2/15	3/4/17	Contig	FDA	SAMN03160855	GCA_001045595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/595/GCA_001045595.1_ASM104559v1	26868381	#42S
Salmonella enterica subsp. enterica serovar Virchow	48409	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72653	52.1	-	MXYR01	86	4839	4577	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368682	GCA_002065025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/025/GCA_002065025.1_ASM206502v1	-	BCW_2815
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.31902	50.2	-	NENV01	159	5749	5294	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420171	GCA_002134505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/505/GCA_002134505.1_ASM213450v1	-	OLC1253
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41983	65.6	-	MMQJ01	59	4335	4143	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918724	GCA_001845705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/705/GCA_001845705.1_ASM184570v1	-	02-R0902
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.18026	39.5	-	CKRQ01	35	2410	2172	3/21/15	3/4/17	Scaffold	SC	SAMEA1023826	GCA_001173045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/045/GCA_001173045.1_6680_8_1	-	SMRU193
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	1.97474	39.7	-	CRKE01	45	2165	1959	3/23/15	3/4/17	Scaffold	SC	SAMEA1025669	GCA_001173065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/065/GCA_001173065.1_6753_3_22	-	SMRU1534
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39353	65.6	-	MMUK01	44	4290	4104	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918619	GCA_001845715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/715/GCA_001845715.1_ASM184571v1	-	01-R0238
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.16292	50.6	-	NENW01	108	5473	5079	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420172	GCA_002134515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/515/GCA_002134515.1_ASM213451v1	-	OLC1254
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.87745	52.1	-	MXYX01	168	5034	4748	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368673	GCA_002065035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/035/GCA_002065035.1_ASM206503v1	-	BCW_2801
Staphylococcus aureus subsp. aureus	46170	PRJNA264076	264076	Terrabacteria group	Firmicutes	2.70863	32.8	-	JSAJ01	62	2787	2646	7/2/15	3/4/17	Contig	FDA	SAMN03112991	GCA_001045625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/625/GCA_001045625.1_ASM104562v1	26404598	51S
Staphylococcus aureus	1280	PRJNA247391	247391	Terrabacteria group	Firmicutes	2.85598	32.7	-	LALF01	297	3040	2856	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02777053	GCA_001045715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/715/GCA_001045715.1_ASM104571v1	26048971	C679
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.85872	52.2	-	MXZC01	89	5003	4723	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368668	GCA_002065055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/055/GCA_002065055.1_ASM206505v1	-	BCW_2796
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.2763	50.4	-	NENY01	114	5567	5158	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420174	GCA_002134525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/525/GCA_002134525.1_ASM213452v1	-	OLC1256
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40625	65.6	-	MMQN01	32	4297	4121	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918720	GCA_001845755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/755/GCA_001845755.1_ASM184575v1	-	06-18635
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.0723	39.6	-	CLVZ01	69	2292	2052	3/21/15	3/4/17	Scaffold	SC	SAMEA1026246	GCA_001173085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/085/GCA_001173085.1_6983_4_79	-	SMRU2287
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10591	39.5	-	CRDJ01	63	2314	2085	3/23/15	3/4/17	Scaffold	SC	SAMEA1024901	GCA_001173145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/145/GCA_001173145.1_6731_4_16	-	SMRU1072
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40781	65.6	-	MMUL01	45	4308	4124	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918618	GCA_001845785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/785/GCA_001845785.1_ASM184578v1	-	98-R459
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.39235	50.5	-	NEOC01	229	5960	5400	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420178	GCA_002134565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/565/GCA_002134565.1_ASM213456v1	-	OLC1260
Salmonella enterica subsp. salamae serovar 55:k:z39	1243601	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.98645	51.6	-	MXZI01	282	5081	4609	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368662	GCA_002065095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/095/GCA_002065095.1_ASM206509v1	-	BCW_2788
Staphylococcus aureus	1280	PRJNA247382	247382	Terrabacteria group	Firmicutes	2.81596	32.7	-	LALC01	675	3049	2781	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02777049	GCA_001045725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/725/GCA_001045725.1_ASM104572v1	26048971	E1470
Staphylococcus aureus	1280	PRJNA247691	247691	Terrabacteria group	Firmicutes	2.96158	32.7	-	LALO01	341	3073	2948	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02777946	GCA_001045745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/745/GCA_001045745.1_ASM104574v1	26048971	M120
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.60533	52.1	-	MXZO01	816	4991	4320	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368653	GCA_002065105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/105/GCA_002065105.1_ASM206510v1	-	BCW_2778
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.36555	50.4	-	NEOD01	206	5773	5353	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420179	GCA_002134575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/575/GCA_002134575.1_ASM213457v1	-	OLC1261
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37693	65.5	-	MMUJ01	68	4290	4092	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918620	GCA_001845825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/825/GCA_001845825.1_ASM184582v1	-	97-06880
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.05293	39.6	-	CKFD01	82	2279	2057	3/21/15	3/4/17	Scaffold	SC	SAMEA1024047	GCA_001173165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/165/GCA_001173165.1_6630_3_19	-	11A
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11677	39.6	-	CLUR01	48	2322	2084	3/21/15	3/4/17	Scaffold	SC	SAMEA1026224	GCA_001173225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/225/GCA_001173225.1_6983_2_24	-	SMRU2232
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38283	65.6	-	MMQD01	45	4289	4102	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918731	GCA_001845895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/895/GCA_001845895.1_ASM184589v1	-	03-R0021
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.36001	50.3	-	NEOE01	154	5793	5333	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420180	GCA_002134585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/585/GCA_002134585.1_ASM213458v1	-	OLC1262
Salmonella enterica subsp. enterica serovar Stanley	192953	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.73668	52.1	-	MXZL01	244	4913	4511	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368658	GCA_002065125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/125/GCA_002065125.1_ASM206512v1	-	BCW_2784
Staphylococcus aureus	1280	PRJNA247773	247773	Terrabacteria group	Firmicutes	2.87037	32.8	-	LALS01	415	3017	2844	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02780904	GCA_001045775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/775/GCA_001045775.1_ASM104577v1	26048971	HUV03
Staphylococcus aureus	1280	PRJNA247361	247361	Terrabacteria group	Firmicutes	2.87301	32.7	-	LALV01	206	3007	2862	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02777001	GCA_001045805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/805/GCA_001045805.1_ASM104580v1	26048971	C123
"Salmonella enterica subsp. arizonae serovar 56:z4,z23,(z32):-"	1967630	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.56505	51.4	-	MXZJ01	311	4684	4102	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368661	GCA_002065135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/135/GCA_002065135.1_ASM206513v1	-	BCW_2787
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.29235	50.5	-	NEOF01	249	5783	5276	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420181	GCA_002134625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/625/GCA_002134625.1_ASM213462v1	-	OLC1263
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38477	65.5	-	MMQC01	61	4299	4097	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918732	GCA_001845925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/925/GCA_001845925.1_ASM184592v1	-	03-R0231
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.09722	39.7	-	CPNC01	110	2293	2095	3/23/15	3/4/17	Scaffold	SC	SAMEA770013	GCA_001173285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/285/GCA_001173285.1_5192_8_5	-	9V/4
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.0091	39.7	-	CRUE01	53	2217	2017	3/23/15	3/4/17	Scaffold	SC	SAMEA1025368	GCA_001173305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/305/GCA_001173305.1_6805_5_21	-	SMRU1701
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39674	65.6	-	MMQQ01	26	4287	4106	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918717	GCA_001845965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/845/965/GCA_001845965.1_ASM184596v1	-	05-14298
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.14855	50.7	-	NEOH01	115	5420	5025	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420183	GCA_002134635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/635/GCA_002134635.1_ASM213463v1	-	OLC1265
Salmonella enterica subsp. enterica serovar Rissen	399587	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.85777	52	-	MYAA01	498	5163	4607	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368641	GCA_002065155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/155/GCA_002065155.1_ASM206515v1	-	BCW_2764
Staphylococcus aureus	1280	PRJNA247376	247376	Terrabacteria group	Firmicutes	2.85769	32.6	-	LALA01	460	3029	2837	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02777033	GCA_001045835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/835/GCA_001045835.1_ASM104583v1	26048971	C1667
Staphylococcus aureus	1280	PRJNA247386	247386	Terrabacteria group	Firmicutes	2.87796	32.7	-	LALD01	604	3089	2899	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02777051	GCA_001045855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/855/GCA_001045855.1_ASM104585v1	26048971	C1675
Salmonella enterica subsp. enterica serovar Potsdam	597	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66371	52.3	-	MYAC01	377	4932	4490	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368639	GCA_002065195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/195/GCA_002065195.1_ASM206519v1	-	BCW_2762
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.50481	50.4	-	NEOM01	112	5796	5396	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420188	GCA_002134645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/645/GCA_002134645.1_ASM213464v1	-	OLC1063
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38473	65.6	-	MMQR01	47	4290	4105	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918716	GCA_001846005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/005/GCA_001846005.1_ASM184600v1	-	05-13169
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.02036	40.2	-	CPSP01	188	2218	1918	3/22/15	3/4/17	Scaffold	SC	SAMEA682445	GCA_001173345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/345/GCA_001173345.1_5366_5_5	-	08B05769
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.13001	39.5	-	CRHK01	61	2342	2116	3/23/15	3/10/17	Scaffold	SC	SAMEA1025436	GCA_001173385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/385/GCA_001173385.1_6736_7_4	-	SMRU1276
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40102	65.6	-	MMQS01	54	4301	4109	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918715	GCA_001846015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/015/GCA_001846015.1_ASM184601v1	-	05-13057
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.47073	50.5	-	NEOO01	166	6015	5507	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420190	GCA_002134685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/685/GCA_002134685.1_ASM213468v1	-	OLC1069
Salmonella enterica subsp. enterica serovar Poona	436295	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.64833	52.2	-	MYAD01	249	4772	4410	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368638	GCA_002065205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/205/GCA_002065205.1_ASM206520v1	-	BCW_2761
Staphylococcus aureus	1280	PRJNA247380	247380	Terrabacteria group	Firmicutes	2.87116	32.7	-	LALB01	152	3010	2879	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02777035	GCA_001045865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/865/GCA_001045865.1_ASM104586v1	26048971	E396
Staphylococcus aureus	1280	PRJNA247396	247396	Terrabacteria group	Firmicutes	2.83102	32.7	-	LALE01	532	3028	2820	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02777062	GCA_001045895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/895/GCA_001045895.1_ASM104589v1	26048971	C1058
Salmonella enterica subsp. enterica serovar Pomona	570935	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.05595	52.2	-	MYAE01	227	5328	4935	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368637	GCA_002065215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/215/GCA_002065215.1_ASM206521v1	-	BCW_2760
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.30922	50.3	-	NEOP01	174	5739	5284	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420191	GCA_002134695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/695/GCA_002134695.1_ASM213469v1	-	OLC1070
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39718	65.6	-	MMQU01	39	4300	4114	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918713	GCA_001846035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/035/GCA_001846035.1_ASM184603v1	-	05-13058
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.07349	39.5	-	CMME01	64	2270	2047	3/22/15	3/10/17	Scaffold	SC	SAMEA1029252	GCA_001173405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/405/GCA_001173405.1_7068_4_13	-	SMRU3133
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.1043	39.6	-	CRFY01	71	2317	2075	3/22/15	3/11/17	Scaffold	SC	SAMEA1025414	GCA_001173425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/425/GCA_001173425.1_6736_5_12	-	SMRU1236
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38487	65.6	-	MMUI01	17	4261	4098	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918621	GCA_001846065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/065/GCA_001846065.1_ASM184606v1	-	97-16464
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	4.77612	50.6	-	NEOA01	63	5036	4704	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420176	GCA_002134725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/725/GCA_002134725.1_ASM213472v1	-	OLC1258
Salmonella enterica subsp. enterica serovar Paratyphi B	57045	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70612	52.1	-	MYAH01	141	4826	4517	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368634	GCA_002065255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/255/GCA_002065255.1_ASM206525v1	-	BCW_2757
Staphylococcus aureus	1280	PRJNA247398	247398	Terrabacteria group	Firmicutes	2.86768	32.7	-	LALG01	401	3012	2848	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02777075	GCA_001045905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/905/GCA_001045905.1_ASM104590v1	26048971	C186
Staphylococcus aureus	1280	PRJNA247399	247399	Terrabacteria group	Firmicutes	2.87449	32.7	-	LALH01	239	3003	2877	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02777076	GCA_001045935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/935/GCA_001045935.1_ASM104593v1	26048971	C329
Salmonella enterica subsp. enterica serovar Oranienburg	28147	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.09796	52.1	-	MYAN01	219	5279	4894	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368628	GCA_002065285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/285/GCA_002065285.1_ASM206528v1	-	BCW_2751
Escherichia coli	562	PRJNA309770	309770	Proteobacteria	Gammaproteobacteria	5.13646	50.7	-	NENR01	132	5415	5060	5/12/17	5/23/17	Contig	Canadian Food Inspection Agency	SAMN04420167	GCA_002134745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/745/GCA_002134745.1_ASM213474v1	-	OLC995
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40922	65.6	-	MMQH01	51	4305	4103	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918726	GCA_001846075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/075/GCA_001846075.1_ASM184607v1	-	02-R1150
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.15708	39.7	-	CMHM01	44	2393	2181	3/23/15	3/10/17	Scaffold	SC	SAMEA1029248	GCA_001173465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/465/GCA_001173465.1_7038_5_4	-	SMRU2956
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.14403	39.5	-	CPOS01	85	2353	2120	3/23/15	3/10/17	Scaffold	SC	SAMEA1020473	GCA_001173485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/485/GCA_001173485.1_6246_2_23	-	LMG869
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35587	65.6	-	MMQM01	56	4272	4077	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918721	GCA_001846115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/115/GCA_001846115.1_ASM184611v1	-	07-05749
Escherichia coli	562	PRJNA374675	374675	Proteobacteria	Gammaproteobacteria	5.22713	50.7	-	NBCL01	192	5526	5149	5/12/17	5/23/17	Contig	University of Sao Paulo	SAMN06330148	GCA_002134765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/765/GCA_002134765.1_ASM213476v1	-	13B
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.0214	52.1	-	MYAR01	367	5277	4810	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368624	GCA_002065335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/335/GCA_002065335.1_ASM206533v1	-	BCW_2747
Staphylococcus aureus	1280	PRJNA247401	247401	Terrabacteria group	Firmicutes	2.86373	32.7	-	LALI01	169	3000	2868	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02777079	GCA_001045955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/955/GCA_001045955.1_ASM104595v1	26048971	E404
Staphylococcus aureus	1280	PRJNA247403	247403	Terrabacteria group	Firmicutes	2.95521	32.7	-	LALM01	318	3058	2946	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02777080	GCA_001045975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/975/GCA_001045975.1_ASM104597v1	26048971	M109
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.14247	52	-	MYAU01	65	5323	5049	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368621	GCA_002065345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/345/GCA_002065345.1_ASM206534v1	-	BCW_2744
Escherichia coli	562	PRJNA381151	381151	Proteobacteria	Gammaproteobacteria	5.11009	50.8	-	NBVU01	617	5441	4978	5/16/17	5/30/17	Contig	USDA ARS	SAMN06670998	GCA_002142335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/335/GCA_002142335.1_ASM214233v1	-	ARS-CC9635
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39686	65.6	-	MMQL01	65	4310	4105	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918722	GCA_001846145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/145/GCA_001846145.1_ASM184614v1	-	02-R0269
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.06781	39.5	-	CLGG01	53	2290	2043	3/21/15	3/10/17	Scaffold	SC	SAMEA1025698	GCA_001173545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/545/GCA_001173545.1_6925_4_1	-	SMRU2137
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.16549	39.6	-	CKCV01	85	2422	2172	3/21/15	3/10/17	Scaffold	SC	SAMEA1023760	GCA_001173565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/565/GCA_001173565.1_6593_5_22	-	19B
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36957	65.6	-	MMUF01	25	4278	4100	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918624	GCA_001846225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/225/GCA_001846225.1_ASM184622v1	-	97-05202
Escherichia coli	562	PRJNA381151	381151	Proteobacteria	Gammaproteobacteria	5.03017	50.6	-	NBVV01	175	5266	4914	5/16/17	5/30/17	Contig	USDA ARS	SAMN06670997	GCA_002142355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/355/GCA_002142355.1_ASM214235v1	-	ARS-CC9622
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69559	52.2	-	MYAV01	61	4752	4522	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368619	GCA_002065355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/355/GCA_002065355.1_ASM206535v1	-	BCW_2742
Staphylococcus aureus	1280	PRJNA247692	247692	Terrabacteria group	Firmicutes	2.91749	32.6	-	LALP01	158	3076	2958	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02777947	GCA_001046015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/015/GCA_001046015.1_ASM104601v1	26048971	CA17
Staphylococcus aureus	1280	PRJNA247693	247693	Terrabacteria group	Firmicutes	2.83405	32.7	-	LALR01	323	2923	2792	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02777948	GCA_001046055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/055/GCA_001046055.1_ASM104605v1	26048971	CA14
Salmonella enterica subsp. enterica serovar Montevideo	115981	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.75063	52.2	-	MYBB01	53	4867	4590	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368612	GCA_002065395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/395/GCA_002065395.1_ASM206539v1	-	BCW_2735
Escherichia coli	562	PRJNA381151	381151	Proteobacteria	Gammaproteobacteria	5.15037	50.8	-	NBVT01	305	5451	5042	5/16/17	5/30/17	Contig	USDA ARS	SAMN06670999	GCA_002142365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/365/GCA_002142365.1_ASM214236v1	-	ARS-CC9591
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39394	65.6	-	MMUC01	24	4283	4092	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918627	GCA_001846265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/265/GCA_001846265.1_ASM184626v1	-	97-20987
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.00047	39.8	-	CQWN01	140	2182	1989	3/23/15	3/10/17	Scaffold	SC	SAMEA1024576	GCA_001173585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/585/GCA_001173585.1_6714_7_20	-	SMRU764
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.05504	39.6	-	CMJJ01	62	2235	2019	3/22/15	3/11/17	Scaffold	SC	SAMEA1026230	GCA_001173625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/625/GCA_001173625.1_7038_8_25	-	SMRU2233
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39599	65.6	-	MMUA01	53	4304	4117	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918629	GCA_001846305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/305/GCA_001846305.1_ASM184630v1	-	97-14062
Escherichia coli	562	PRJNA381151	381151	Proteobacteria	Gammaproteobacteria	5.33059	50.6	-	NBVW01	340	5662	5182	5/16/17	5/30/17	Contig	USDA ARS	SAMN06670996	GCA_002142415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/415/GCA_002142415.1_ASM214241v1	-	ARS-CC9604
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.65063	52.1	-	MYAY01	989	5190	4400	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368615	GCA_002065415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/415/GCA_002065415.1_ASM206541v1	-	BCW_2738
Staphylococcus aureus	1280	PRJNA248081	248081	Terrabacteria group	Firmicutes	2.8593	32.7	-	LALW01	192	3005	2864	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02786764	GCA_001046075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/075/GCA_001046075.1_ASM104607v1	26048971	C2403
Staphylococcus aureus	1280	PRJNA248085	248085	Terrabacteria group	Firmicutes	2.88144	32.6	-	LALY01	282	3073	2895	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02786765	GCA_001046105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/105/GCA_001046105.1_ASM104610v1	26048971	C1407
Salmonella enterica subsp. enterica serovar Muenster	82689	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70071	52.1	-	MYAW01	122	4817	4519	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368617	GCA_002065425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/425/GCA_002065425.1_ASM206542v1	-	BCW_2740
Escherichia coli	562	PRJNA381151	381151	Proteobacteria	Gammaproteobacteria	5.26558	50.6	-	NBVX01	284	5567	5157	5/16/17	5/30/17	Contig	USDA ARS	SAMN06670995	GCA_002142435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/435/GCA_002142435.1_ASM214243v1	-	ARS-CC9640
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35886	65.6	-	MMQF01	67	4287	4100	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918729	GCA_001846315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/315/GCA_001846315.1_ASM184631v1	-	02-R1551
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14637	39.6	-	CRAX01	74	2318	2044	3/23/15	3/11/17	Scaffold	SC	SAMEA1024744	GCA_001173645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/645/GCA_001173645.1_6730_7_4	-	SMRU700
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21407	39.6	-	CPOP01	92	2451	2215	3/22/15	3/10/17	Scaffold	SC	SAMEA1408300	GCA_001173665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/665/GCA_001173665.1_7444_8_30	-	9812+11187
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40059	65.6	-	MMTZ01	21	4278	4115	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918630	GCA_001846345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/345/GCA_001846345.1_ASM184634v1	-	99-R727
Escherichia coli	562	PRJNA381151	381151	Proteobacteria	Gammaproteobacteria	5.25341	50.7	-	NBVY01	307	5603	5138	5/16/17	5/30/17	Contig	USDA ARS	SAMN06670993	GCA_002142445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/142/445/GCA_002142445.1_ASM214244v1	-	ARS-CC9624
Salmonella enterica subsp. enterica serovar Monschaui	29480	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.65576	52.3	-	MYBC01	100	4699	4431	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368611	GCA_002065435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/435/GCA_002065435.1_ASM206543v1	-	BCW_2734
Staphylococcus aureus	1280	PRJNA248096	248096	Terrabacteria group	Firmicutes	2.92761	32.7	-	LALZ01	414	3125	2950	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02786786	GCA_001046135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/135/GCA_001046135.1_ASM104613v1	26048971	C1440
Staphylococcus aureus	1280	PRJNA248183	248183	Terrabacteria group	Firmicutes	2.93057	32.7	-	LAMD01	216	3106	2960	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02795854	GCA_001046145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/145/GCA_001046145.1_ASM104614v1	26048971	15-Jul
Salmonella enterica subsp. enterica serovar Mbadaka	1967652	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69179	52.2	-	MYBJ01	52	4750	4514	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368604	GCA_002065465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/465/GCA_002065465.1_ASM206546v1	-	BCW_2727
Escherichia coli M4	1392850	PRJNA358855	358855	Proteobacteria	Gammaproteobacteria	4.72623	50.7	-	MTRZ01	112	4895	4529	5/19/17	5/24/17	Contig	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN06186587	GCA_002149955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/149/955/GCA_002149955.1_ASM214995v1	-	M4
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38343	65.6	-	MMTX01	25	4276	4103	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918632	GCA_001846385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/385/GCA_001846385.1_ASM184638v1	-	98-R405
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09932	39.6	-	CKGT01	70	2341	2103	3/21/15	3/10/17	Scaffold	SC	SAMEA1023845	GCA_001173805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/805/GCA_001173805.1_6631_1_19	-	9V
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.2321	39.4	-	CLLL01	100	2481	2223	3/21/15	3/11/17	Scaffold	SC	SAMEA1028669	GCA_001173825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/825/GCA_001173825.1_6938_5_7	-	SMRU2647
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37807	65.6	-	MMTV01	38	4271	4090	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918634	GCA_001846425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/425/GCA_001846425.1_ASM184642v1	-	99-R347
Escherichia coli	562	PRJNA369189	369189	Proteobacteria	Gammaproteobacteria	4.95238	50.8	-	MUBI01	165	5204	4739	5/19/17	5/24/17	Contig	LAU	SAMN06279413	GCA_002151245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/151/245/GCA_002151245.1_ASM215124v1	-	AUH_IMP147
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.82748	52.1	-	MYBQ01	376	5072	4612	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368597	GCA_002065495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/495/GCA_002065495.1_ASM206549v1	-	KS 6
Staphylococcus aureus	1280	PRJNA248190	248190	Terrabacteria group	Firmicutes	2.86932	32.6	-	LAMG01	152	2998	2871	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02795921	GCA_001046175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/175/GCA_001046175.1_ASM104617v1	26048971	C2701
Staphylococcus aureus	1280	PRJNA248192	248192	Terrabacteria group	Firmicutes	2.88531	32.7	-	LAMH01	215	3019	2866	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02795922	GCA_001046195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/195/GCA_001046195.1_ASM104619v1	26048971	C1396
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66313	52.1	-	MYBR01	45	4701	4468	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368596	GCA_002065505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/505/GCA_002065505.1_ASM206550v1	-	BCW_2719
Escherichia coli	562	PRJNA275512	275512	Proteobacteria	Gammaproteobacteria	4.7137	50.8	-	MSQZ01	134	4923	4601	5/22/17	5/24/17	Contig	"West China Hospital, Sichuan University"	SAMN06197016	GCA_002153985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/985/GCA_002153985.1_ASM215398v1	-	WCHEC1618
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39722	65.6	-	MMTU01	45	4287	4100	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918635	GCA_001846435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/435/GCA_001846435.1_ASM184643v1	-	98-R787
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.05167	39.5	-	CKXC01	78	2259	2038	3/21/15	3/11/17	Scaffold	SC	SAMEA1026249	GCA_001174005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/005/GCA_001174005.1_6823_6_20	-	SMRU1988
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09317	39.6	-	CKED01	127	2278	2035	3/21/15	3/14/17	Scaffold	SC	SAMEA1023923	GCA_001174085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/085/GCA_001174085.1_6630_1_9	-	6B
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39804	65.6	-	MMTR01	13	4284	4110	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918638	GCA_001846505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/505/GCA_001846505.1_ASM184650v1	-	98-R696
Escherichia coli	562	PRJNA362688	362688	Proteobacteria	Gammaproteobacteria	4.85201	50.7	-	MTPN01	135	5122	4751	5/22/17	5/24/17	Contig	Chinese Academy of Inspection and Quarantine	SAMN06245891	GCA_002154185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/185/GCA_002154185.1_ASM215418v1	-	WQMCR
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80888	52.1	-	MYBS01	56	4880	4621	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368595	GCA_002065535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/535/GCA_002065535.1_ASM206553v1	-	BCW_2718
Staphylococcus aureus	1280	PRJNA248198	248198	Terrabacteria group	Firmicutes	2.95522	32.7	-	LAMJ01	220	3107	2964	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02795938	GCA_001046215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/215/GCA_001046215.1_ASM104621v1	26048971	C2304
Staphylococcus aureus	1280	PRJNA248199	248199	Terrabacteria group	Firmicutes	2.88343	32.6	-	LAMK01	120	3039	2900	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02795939	GCA_001046235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/235/GCA_001046235.1_ASM104623v1	26048971	C1543
Salmonella enterica subsp. enterica serovar Kedougou	358771	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.9853	51.8	-	MYBU01	315	5248	4814	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368592	GCA_002065555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/555/GCA_002065555.1_ASM206555v1	-	BCW_2715
Escherichia coli	562	PRJNA368995	368995	Proteobacteria	Gammaproteobacteria	5.10312	50.8	-	MUGA01	191	5304	4839	5/22/17	5/24/17	Contig	FAMERP	SAMN06275513	GCA_002154285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/285/GCA_002154285.1_ASM215428v1	-	SJRP/Ec42685
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38477	65.6	-	MMTO01	44	4278	4093	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918641	GCA_001846575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/575/GCA_001846575.1_ASM184657v1	-	03-R0826
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09617	39.6	-	CRVA01	78	2345	2109	3/23/15	3/11/17	Scaffold	SC	SAMEA1025281	GCA_001174145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/145/GCA_001174145.1_6805_6_7	-	10B
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09062	39.6	-	CLGS01	64	2339	2102	3/21/15	3/10/17	Scaffold	SC	SAMEA1026092	GCA_001174165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/165/GCA_001174165.1_6925_4_19	-	SMRU2155
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38542	65.6	-	MMTM01	54	4291	4105	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918643	GCA_001846625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/625/GCA_001846625.1_ASM184662v1	-	02-R1335
Escherichia coli	562	PRJNA368988	368988	Proteobacteria	Gammaproteobacteria	5.00533	50.4	-	MUFZ01	136	5266	4894	5/22/17	5/24/17	Contig	FAMERP	SAMN06275485	GCA_002154295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/295/GCA_002154295.1_ASM215429v1	-	39764
Salmonella enterica subsp. enterica serovar Kedougou	358771	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.76843	52.1	-	MYBZ01	54	4840	4601	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368587	GCA_002065575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/575/GCA_002065575.1_ASM206557v1	-	BCW_2710
Staphylococcus aureus	1280	PRJNA247764	247764	Terrabacteria group	Firmicutes	2.85494	32.7	-	LALK01	150	2972	2862	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02780897	GCA_001046255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/255/GCA_001046255.1_ASM104625v1	26048971	HUV01
Staphylococcus aureus	1280	PRJNA247772	247772	Terrabacteria group	Firmicutes	2.86615	32.8	-	LALL01	161	2970	2865	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02780902	GCA_001046265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/265/GCA_001046265.1_ASM104626v1	26048971	HUV07
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.03166	52	-	MYCL01	157	5155	4823	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368575	GCA_002065585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/585/GCA_002065585.1_ASM206558v1	-	BCW_2698
Escherichia coli	562	PRJNA369040	369040	Proteobacteria	Gammaproteobacteria	4.85849	50.7	-	MUAC01	164	5193	4800	5/22/17	5/24/17	Contig	FAMERP	SAMN06276119	GCA_002154755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/755/GCA_002154755.1_ASM215475v1	-	SJRP/Ec42687
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40446	65.6	-	MMTL01	50	4311	4115	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918644	GCA_001846635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/635/GCA_001846635.1_ASM184663v1	-	03-R0099
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.0604	39.8	-	CKXK01	58	2259	2036	3/21/15	3/11/17	Scaffold	SC	SAMEA1025805	GCA_001174185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/185/GCA_001174185.1_6823_6_24	-	SMRU1992
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.05596	39.6	-	CKTN01	65	2267	2035	3/21/15	3/11/17	Scaffold	SC	SAMEA1026123	GCA_001174225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/225/GCA_001174225.1_6823_1_21	-	SMRU1869
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37623	65.6	-	MMTJ01	13	4269	4103	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918646	GCA_001846645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/645/GCA_001846645.1_ASM184664v1	-	02-R0755
Escherichia coli	562	PRJNA369042	369042	Proteobacteria	Gammaproteobacteria	5.01944	50.5	-	MUAD01	220	5374	4923	5/22/17	5/24/17	Contig	FAMERP	SAMN06276168	GCA_002154765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/765/GCA_002154765.1_ASM215476v1	-	SJRP/Ec42690
Salmonella enterica subsp. enterica serovar Kambole	1967648	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.87662	52.2	-	MYCA01	60	4982	4706	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368586	GCA_002065595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/595/GCA_002065595.1_ASM206559v1	-	BCW_2709
Staphylococcus aureus	1280	PRJNA248203	248203	Terrabacteria group	Firmicutes	2.91025	32.7	-	LAML01	111	3076	2951	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02795940	GCA_001046295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/295/GCA_001046295.1_ASM104629v1	26048971	C2485
Staphylococcus aureus	1280	PRJNA248207	248207	Terrabacteria group	Firmicutes	2.81419	32.7	-	LAMN01	119	2957	2820	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02795943	GCA_001046315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/315/GCA_001046315.1_ASM104631v1	26048971	PE001
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.64958	52.2	-	MYCS01	53	4676	4451	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368568	GCA_002065635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/635/GCA_002065635.1_ASM206563v1	-	BCW_2690
Escherichia coli	562	PRJNA369108	369108	Proteobacteria	Gammaproteobacteria	5.75902	50.5	-	MUBQ01	169	6145	5559	5/22/17	5/24/17	Contig	FAMERP	SAMN06277330	GCA_002154805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/805/GCA_002154805.1_ASM215480v1	-	SJRP/Ec42695
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39852	65.6	-	MMTF01	31	4293	4108	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918650	GCA_001846735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/735/GCA_001846735.1_ASM184673v1	-	02-R1850
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.03668	39.7	-	CKNR01	40	2229	1986	3/21/15	3/10/17	Scaffold	SC	SAMEA1024172	GCA_001174305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/305/GCA_001174305.1_6673_8_14	-	SMRU254
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.1883	39.9	-	CPKE01	272	2364	2199	3/23/15	3/4/17	Scaffold	SC	SAMEA682604	GCA_001174325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/325/GCA_001174325.1_5381_3_4	-	09B06974
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40964	65.6	-	MMTB01	14	4298	4117	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918654	GCA_001846825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/825/GCA_001846825.1_ASM184682v1	-	04-R0569
Escherichia coli	562	PRJNA369109	369109	Proteobacteria	Gammaproteobacteria	5.56095	50.4	-	MUBR01	170	5903	5379	5/22/17	5/24/17	Contig	FAMERP	SAMN06277331	GCA_002154925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/925/GCA_002154925.1_ASM215492v1	-	SJRP/Ec42698
Salmonella enterica subsp. enterica serovar Give	46626	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66764	52.2	-	MYCU01	58	4751	4508	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368566	GCA_002065645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/645/GCA_002065645.1_ASM206564v1	-	BCW_2688
Staphylococcus aureus	1280	PRJNA248210	248210	Terrabacteria group	Firmicutes	2.94733	32.8	-	LAMO01	683	2892	2760	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02795946	GCA_001046335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/335/GCA_001046335.1_ASM104633v1	26048971	PE009
Staphylococcus aureus	1280	PRJNA248228	248228	Terrabacteria group	Firmicutes	2.84363	32.6	-	LAMS01	87	2971	2846	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02795976	GCA_001046345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/345/GCA_001046345.1_ASM104634v1	26048971	99-48
Salmonella enterica subsp. enterica serovar Haifa	192956	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.8171	52.2	-	MYCQ01	82	4934	4698	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368570	GCA_002065675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/675/GCA_002065675.1_ASM206567v1	-	BCW_2692
Escherichia coli	562	PRJNA371820	371820	Proteobacteria	Gammaproteobacteria	4.95639	50.6	-	MUZO01	315	5137	4844	5/22/17	5/24/17	Contig	University of Sao Paulo	SAMN06312619	GCA_002155125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/125/GCA_002155125.1_ASM215512v1	-	Ec56AC1
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41349	65.6	-	MMSY01	44	4301	4113	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918657	GCA_001846885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/885/GCA_001846885.1_ASM184688v1	-	02-R1881
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.19741	39.5	-	CMRX01	64	2453	2198	3/22/15	3/4/17	Scaffold	SC	SAMEA2062382	GCA_001174405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/405/GCA_001174405.1_9803_8_53	-	6B
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.15821	39.6	-	CMAX01	94	2422	2164	3/21/15	3/4/17	Scaffold	SC	SAMEA1029137	GCA_001174445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/445/GCA_001174445.1_7004_6_38	-	SMRU2846
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38594	65.6	-	MMSU01	77	4296	4102	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918661	GCA_001846975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/975/GCA_001846975.1_ASM184697v1	-	02-R1847
Escherichia coli	562	PRJNA369035	369035	Proteobacteria	Gammaproteobacteria	5.42302	50.7	-	MUAB01	191	5762	5206	5/22/17	5/24/17	Contig	FAMERP	SAMN06275983	GCA_002155195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/195/GCA_002155195.1_ASM215519v1	-	SJRP/Ec42664
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69927	52.1	-	MYCV01	53	4818	4558	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368565	GCA_002065685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/685/GCA_002065685.1_ASM206568v1	-	BCW_2687
Staphylococcus aureus	1280	PRJNA248229	248229	Terrabacteria group	Firmicutes	2.79521	32.6	-	LAMT01	93	2899	2778	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02795977	GCA_001046375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/375/GCA_001046375.1_ASM104637v1	26048971	C1768
Staphylococcus aureus	1280	PRJNA248230	248230	Terrabacteria group	Firmicutes	2.85121	32.6	-	LAMU01	248	2996	2848	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02796021	GCA_001046395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/395/GCA_001046395.1_ASM104639v1	26048971	19-Jan
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.84085	52	-	MYCT01	39	4936	4674	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368567	GCA_002065715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/715/GCA_002065715.1_ASM206571v1	-	BCW_2689
Escherichia coli	562	PRJNA369107	369107	Proteobacteria	Gammaproteobacteria	5.37195	50.5	-	MUBP01	165	5613	5161	5/22/17	5/24/17	Contig	FAMERP	SAMN06277328	GCA_002155205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/205/GCA_002155205.1_ASM215520v1	-	SJRP/Ec42694
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39699	65.6	-	MMST01	10	4271	4110	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918662	GCA_001846995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/846/995/GCA_001846995.1_ASM184699v1	-	02-R1842
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10084	39.7	-	CRHF01	61	2346	2124	3/22/15	3/4/17	Scaffold	SC	SAMEA1025494	GCA_001174465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/465/GCA_001174465.1_6736_7_13	-	SMRU1285
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10654	39.6	-	CKLL01	87	2340	2081	3/21/15	3/9/17	Scaffold	SC	SAMEA1023947	GCA_001174485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/485/GCA_001174485.1_6641_6_5	-	33B
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39552	65.6	-	MMSR01	30	4293	4113	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918664	GCA_001847045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/045/GCA_001847045.1_ASM184704v1	-	03-R0259
Escherichia coli	562	PRJNA369318	369318	Proteobacteria	Gammaproteobacteria	5.12829	50.7	-	MUJC01	149	5420	4971	5/22/17	5/24/17	Contig	LAU	SAMN06284153	GCA_002155315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/315/GCA_002155315.1_ASM215531v1	-	AUH_IMP186
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80553	52.1	-	MYCZ01	36	4947	4698	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368561	GCA_002065725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/725/GCA_002065725.1_ASM206572v1	-	BCW_2682
Staphylococcus aureus	1280	PRJNA248097	248097	Terrabacteria group	Firmicutes	2.89723	32.7	-	LAMA01	232	3043	2885	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02786789	GCA_001046405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/405/GCA_001046405.1_ASM104640v1	26048971	C1378
Staphylococcus aureus	1280	PRJNA248138	248138	Terrabacteria group	Firmicutes	2.89209	32.7	-	LAMB01	165	3033	2906	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02786792	GCA_001046435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/435/GCA_001046435.1_ASM104643v1	26048971	C1979
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.8666	52.2	-	MYCW01	67	5013	4719	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368564	GCA_002065735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/735/GCA_002065735.1_ASM206573v1	-	BCW_2686
Escherichia coli	562	PRJNA369317	369317	Proteobacteria	Gammaproteobacteria	5.05202	50.6	-	MUJB01	104	5347	4953	5/22/17	5/24/17	Contig	LAU	SAMN06284151	GCA_002155325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/325/GCA_002155325.1_ASM215532v1	-	AUH_IMP168
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38444	65.5	-	MMSP01	103	4321	4108	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918666	GCA_001847075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/075/GCA_001847075.1_ASM184707v1	-	03-R0088
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.05568	39.8	-	CRLJ01	68	2248	2046	3/23/15	3/4/17	Scaffold	SC	SAMEA1025093	GCA_001174505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/505/GCA_001174505.1_6755_1_18	-	SMRU786
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.08465	39.5	-	CPPB01	205	2252	2037	3/23/15	3/4/17	Scaffold	SC	SAMEA1020328	GCA_001174545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/545/GCA_001174545.1_6187_4_2	-	DG_23
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39863	65.6	-	MMSO01	41	4308	4118	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918667	GCA_001847085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/085/GCA_001847085.1_ASM184708v1	-	03-R0091
Escherichia coli	562	PRJNA369323	369323	Proteobacteria	Gammaproteobacteria	5.0021	50.8	-	MUJD01	135	5233	4861	5/22/17	5/24/17	Contig	LAU	SAMN06284178	GCA_002155365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/365/GCA_002155365.1_ASM215536v1	-	AUH_IMP190
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.75056	52.1	-	MYDB01	44	4881	4631	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368559	GCA_002065775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/775/GCA_002065775.1_ASM206577v1	-	BCW_2680
Staphylococcus aureus	1280	PRJNA248140	248140	Terrabacteria group	Firmicutes	2.88436	32.6	-	LAMC01	182	3040	2885	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02787040	GCA_001046445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/445/GCA_001046445.1_ASM104644v1	26048971	C1762
Staphylococcus aureus	1280	PRJNA248186	248186	Terrabacteria group	Firmicutes	2.96368	32.7	-	LAME01	237	3105	2971	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02795917	GCA_001046475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/475/GCA_001046475.1_ASM104647v1	26048971	Jan-41
Salmonella enterica subsp. enterica serovar Elizabethville	1967992	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69326	52.2	-	MYDD01	59	4753	4516	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368557	GCA_002065785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/785/GCA_002065785.1_ASM206578v1	-	BCW_2678
Escherichia coli	562	PRJNA369319	369319	Proteobacteria	Gammaproteobacteria	4.97563	50.8	-	MUKD01	188	5363	4783	5/22/17	5/24/17	Contig	LAU	SAMN06284154	GCA_002155375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/375/GCA_002155375.1_ASM215537v1	-	AUH_IMP187
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34476	65.6	-	MMSN01	33	4250	4072	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918668	GCA_001847125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/125/GCA_001847125.1_ASM184712v1	-	03-R0108
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.10265	39.5	-	CLKG01	54	2320	2071	3/21/15	3/4/17	Scaffold	SC	SAMEA1029346	GCA_001174585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/585/GCA_001174585.1_6938_3_20	-	SMRU3145
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21826	39.6	-	CPLW01	88	2455	2199	3/23/15	3/4/17	Scaffold	SC	SAMEA1408312	GCA_001174685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/685/GCA_001174685.1_7444_8_10	-	9609+24019
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34853	65.6	-	MMSM01	17	4246	4077	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918669	GCA_001847135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/135/GCA_001847135.1_ASM184713v1	-	03-R0106
Escherichia coli	562	PRJNA369335	369335	Proteobacteria	Gammaproteobacteria	5.20094	50.6	-	MUKE01	113	5424	5054	5/22/17	5/24/17	Contig	LAU	SAMN06284338	GCA_002155385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/385/GCA_002155385.1_ASM215538v1	-	AUH_IMP199
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.74679	52	-	MYDC01	28	4879	4630	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368558	GCA_002065805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/805/GCA_002065805.1_ASM206580v1	-	BCW_2679
Staphylococcus aureus	1280	PRJNA248187	248187	Terrabacteria group	Firmicutes	2.85616	32.7	-	LAMF01	431	3021	2839	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02795918	GCA_001046485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/485/GCA_001046485.1_ASM104648v1	26048971	C2191
Staphylococcus aureus	1280	PRJNA248193	248193	Terrabacteria group	Firmicutes	2.87106	32.6	-	LAMI01	309	3042	2869	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02795923	GCA_001046505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/505/GCA_001046505.1_ASM104650v1	26048971	C1427
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.87329	52.1	-	MYDE01	61	5016	4714	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368556	GCA_002065815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/815/GCA_002065815.1_ASM206581v1	-	BCW_2677
Escherichia coli	562	PRJNA369339	369339	Proteobacteria	Gammaproteobacteria	4.8628	50.8	-	MUKG01	139	5036	4631	5/22/17	5/24/17	Contig	LAU	SAMN06284382	GCA_002155445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/445/GCA_002155445.1_ASM215544v1	-	AUH_IMP203
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38483	65.6	-	MMSI01	31	4272	4089	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918673	GCA_001847205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/205/GCA_001847205.1_ASM184720v1	-	03-R0884
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10633	39.5	-	CLTI01	60	2312	2104	3/21/15	3/4/17	Scaffold	SC	SAMEA1028804	GCA_001174765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/765/GCA_001174765.1_6972_5_24	-	SMRU2640
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10428	39.6	-	CLEL01	77	2330	2092	3/21/15	3/4/17	Scaffold	SC	SAMEA1025702	GCA_001174805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/805/GCA_001174805.1_6899_6_17	-	SMRU2081
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38417	65.6	-	MMSD01	25	4275	4096	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918678	GCA_001847305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/305/GCA_001847305.1_ASM184730v1	-	03-R0580
Escherichia coli	562	PRJNA369338	369338	Proteobacteria	Gammaproteobacteria	5.01224	50.5	-	MUKF01	119	5314	4900	5/22/17	5/24/17	Contig	LAU	SAMN06284365	GCA_002155455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/455/GCA_002155455.1_ASM215545v1	-	AUH_IMP200
Salmonella enterica subsp. enterica serovar Derby	28144	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.88258	52	-	MYDH01	138	5025	4733	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368553	GCA_002065855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/855/GCA_002065855.1_ASM206585v1	-	BCW_2673
Staphylococcus aureus	1280	PRJNA248206	248206	Terrabacteria group	Firmicutes	2.92914	32.7	-	LAMM01	221	3093	2948	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02795941	GCA_001046535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/535/GCA_001046535.1_ASM104653v1	26048971	C1504
Staphylococcus aureus	1280	PRJNA248216	248216	Terrabacteria group	Firmicutes	2.84981	32.7	-	LAMP01	111	2990	2853	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02795953	GCA_001046555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/555/GCA_001046555.1_ASM104655v1	26048971	99-06
Salmonella enterica subsp. enterica serovar Derby	28144	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.75858	52.1	-	MYDI01	78	4841	4578	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368551	GCA_002065865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/865/GCA_002065865.1_ASM206586v1	-	BCW_2671
Escherichia coli	562	PRJNA369342	369342	Proteobacteria	Gammaproteobacteria	4.80678	50.7	-	MUJE01	72	4992	4713	5/22/17	5/24/17	Contig	LAU	SAMN06284414	GCA_002155465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/465/GCA_002155465.1_ASM215546v1	-	AUH_IMP205
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38711	65.6	-	MMSB01	48	4296	4123	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918680	GCA_001847365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/365/GCA_001847365.1_ASM184736v1	-	02-12682
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.19016	39.7	-	CLQI01	66	2392	2118	3/21/15	3/6/17	Scaffold	SC	SAMEA1028932	GCA_001174825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/825/GCA_001174825.1_6949_4_11	-	SMRU2483
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07483	39.7	-	CKFV01	136	2310	2079	3/21/15	3/5/17	Scaffold	SC	SAMEA1023803	GCA_001174845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/845/GCA_001174845.1_6630_4_14	-	19F
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37636	65.6	-	MMSA01	101	4301	4100	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918681	GCA_001847385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/385/GCA_001847385.1_ASM184738v1	-	03-R0467
Escherichia coli	562	PRJNA369344	369344	Proteobacteria	Gammaproteobacteria	5.12702	50.6	-	MUJF01	113	5275	4932	5/22/17	5/24/17	Contig	LAU	SAMN06284415	GCA_002155505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/505/GCA_002155505.1_ASM215550v1	-	AUH_IMP312
Salmonella enterica subsp. enterica serovar Concord	483687	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.2333	51.9	-	MYDK01	64	5442	5159	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368547	GCA_002065885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/885/GCA_002065885.1_ASM206588v1	-	BCW_2666
Staphylococcus aureus	1280	PRJNA248217	248217	Terrabacteria group	Firmicutes	2.84625	32.7	-	LAMQ01	193	2968	2833	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02795954	GCA_001046575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/575/GCA_001046575.1_ASM104657v1	26048971	C1782
Staphylococcus aureus	1280	PRJNA248227	248227	Terrabacteria group	Firmicutes	2.85864	32.7	-	LAMR01	214	2984	2854	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02795975	GCA_001046585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/585/GCA_001046585.1_ASM104658v1	26048971	C1410
Salmonella enterica subsp. enterica serovar Concord	483687	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.08658	52.1	-	MYDL01	102	5321	5028	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368545	GCA_002065915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/915/GCA_002065915.1_ASM206591v1	-	BCW_2664
Escherichia coli	562	PRJNA369345	369345	Proteobacteria	Gammaproteobacteria	5.31238	50.6	-	MUKH01	158	5622	5210	5/22/17	5/24/17	Contig	LAU	SAMN06284417	GCA_002155515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/515/GCA_002155515.1_ASM215551v1	-	AUH_IMP314
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39691	65.6	-	MMRY01	55	4313	4122	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918683	GCA_001847415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/415/GCA_001847415.1_ASM184741v1	-	03-R0482
Streptococcus pneumoniae	1313	PRJNA289436	289436	Terrabacteria group	Firmicutes	2.11505	39.6	-	LGHY01	78	2331	2041	7/24/15	3/15/17	Scaffold	National Institute for Communicable Diseases	SAMN03853744	GCA_001187425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/425/GCA_001187425.1_ASM118742v1	27342074	Case B serotypeable
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14915	39.5	-	CRAU01	70	2382	2145	3/23/15	3/10/17	Scaffold	SC	SAMEA1025103	GCA_001191675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/675/GCA_001191675.1_6730_7_3	-	SMRU699
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37481	65.6	-	MMRW01	50	4279	4090	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918685	GCA_001847445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/445/GCA_001847445.1_ASM184744v1	-	03-R0555
Escherichia coli	562	PRJNA369347	369347	Proteobacteria	Gammaproteobacteria	4.97561	50.5	-	MUKI01	96	5288	4871	5/22/17	5/24/17	Contig	LAU	SAMN06284418	GCA_002155535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/535/GCA_002155535.1_ASM215553v1	-	AUH_IMP319
Salmonella enterica subsp. enterica serovar Concord	483687	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.07558	52.1	-	MYDM01	86	5298	5015	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368544	GCA_002065935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/935/GCA_002065935.1_ASM206593v1	-	BCW_2663
Staphylococcus aureus	1280	PRJNA248233	248233	Terrabacteria group	Firmicutes	2.83964	32.6	-	LAMV01	323	3010	2844	7/2/15	3/4/17	Contig	South American MRSA Consortium	SAMN02796022	GCA_001046615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/615/GCA_001046615.1_ASM104661v1	26048971	C1555
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.96467	32.6	-	CVRW01	134	3115	2954	6/4/15	3/4/17	Contig	SC	SAMEA862547	GCA_001047755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/755/GCA_001047755.1_5139_7_5	-	M170
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.91059	52	-	MYDO01	80	5091	4692	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03357165	GCA_002065945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/945/GCA_002065945.1_ASM206594v1	-	BCW_2658
Escherichia coli	562	PRJNA369348	369348	Proteobacteria	Gammaproteobacteria	5.2658	50.6	-	MUJG01	140	5469	5103	5/22/17	5/24/17	Contig	LAU	SAMN06284419	GCA_002155565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/565/GCA_002155565.1_ASM215556v1	-	AUH_IMP322
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38953	65.6	-	MMRL01	23	4263	4086	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918696	GCA_001847675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/675/GCA_001847675.1_ASM184767v1	-	03-R0613
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.13166	39.5	-	CRTX01	75	2354	2124	3/22/15	3/10/17	Scaffold	SC	SAMEA1025293	GCA_001191755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/755/GCA_001191755.1_6805_5_13	-	SMRU1693
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.00868	39.8	-	CRAB01	69	2222	1992	3/23/15	3/10/17	Scaffold	SC	SAMEA1024617	GCA_001191775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/775/GCA_001191775.1_6730_6_2	-	SMRU674
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.402	65.6	-	MMRK01	25	4277	4099	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918697	GCA_001847705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/705/GCA_001847705.1_ASM184770v1	-	03-R1348
Escherichia coli	562	PRJNA369351	369351	Proteobacteria	Gammaproteobacteria	5.15394	50.7	-	MUKJ01	109	5313	4973	5/22/17	5/24/17	Contig	LAU	SAMN06284443	GCA_002155575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/575/GCA_002155575.1_ASM215557v1	-	AUH_IMP394
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.81498	52.2	-	MYDP01	97	4998	4593	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03357164	GCA_002065955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/955/GCA_002065955.1_ASM206595v1	-	BCW_2657
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.9207	32.6	-	CVRA01	54	3090	2960	5/23/15	3/4/17	Contig	SC	SAMEA1324588	GCA_001047795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/795/GCA_001047795.1_7748_4_4	-	USFL004
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.85086	32.6	-	CVQU01	43	2971	2838	5/21/15	3/4/17	Contig	SC	SAMEA1324595	GCA_001047815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/815/GCA_001047815.1_7748_4_3	-	USFL003
Salmonella enterica subsp. enterica serovar Chandans	1967990	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.59273	52.1	-	MYDQ01	29	4646	4395	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368541	GCA_002065995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/995/GCA_002065995.1_ASM206599v1	-	BCW_2656
Escherichia coli	562	PRJNA369353	369353	Proteobacteria	Gammaproteobacteria	4.97251	50.7	-	MUKK01	164	5165	4765	5/22/17	5/24/17	Contig	LAU	SAMN06284481	GCA_002155585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/585/GCA_002155585.1_ASM215558v1	-	AUH_IMP396
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39567	65.6	-	MMRI01	49	4284	4091	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918699	GCA_001847745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/745/GCA_001847745.1_ASM184774v1	-	03-R0835
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08145	39.6	-	CQUT01	47	2296	2073	3/23/15	3/4/17	Scaffold	SC	SAMEA1025600	GCA_001191875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/875/GCA_001191875.1_6710_6_22	-	SMRU1366
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.11584	39.7	-	CQUY01	67	2273	2035	3/22/15	3/4/17	Scaffold	SC	SAMEA1025495	GCA_001191915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/915/GCA_001191915.1_6710_7_10	-	SMRU1378
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39763	65.6	-	MMRC01	42	4284	4100	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918705	GCA_001847805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/805/GCA_001847805.1_ASM184780v1	-	04-R0261
Escherichia coli	562	PRJNA369354	369354	Proteobacteria	Gammaproteobacteria	5.05795	50.6	-	MUJH01	105	5352	4943	5/22/17	5/24/17	Contig	LAU	SAMN06284512	GCA_002155595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/595/GCA_002155595.1_ASM215559v1	-	AUH_IMP443
Salmonella enterica subsp. enterica serovar Cerro	340188	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.53199	52.3	-	MYDR01	60	4587	4345	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368540	GCA_002066015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/015/GCA_002066015.1_ASM206601v1	-	BCW_2655
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.9257	32.7	-	CVQT01	43	3100	2968	5/21/15	3/4/17	Contig	SC	SAMEA1324644	GCA_001047835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/835/GCA_001047835.1_7748_4_5	-	USFL005
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.89831	32.6	-	CVQS01	39	3044	2918	5/21/15	3/4/17	Contig	SC	SAMEA1324675	GCA_001047855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/855/GCA_001047855.1_7748_4_1	-	USFL001
Salmonella enterica subsp. enterica serovar Brandenburg	149387	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.62082	52.2	-	MYDU01	41	4680	4434	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368538	GCA_002066025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/025/GCA_002066025.1_ASM206602v1	-	BCW_2652
Escherichia coli	562	PRJNA369355	369355	Proteobacteria	Gammaproteobacteria	5.13459	50.7	-	MUJI01	176	5445	4963	5/22/17	5/24/17	Contig	LAU	SAMN06284568	GCA_002155645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/645/GCA_002155645.1_ASM215564v1	-	AUH_IMP605
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38402	65.6	-	MMRD01	17	4267	4097	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918704	GCA_001847825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/825/GCA_001847825.1_ASM184782v1	-	04-R0102
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11445	39.5	-	CQXG01	53	2342	2106	3/23/15	3/4/17	Scaffold	SC	SAMEA1025077	GCA_001191935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/935/GCA_001191935.1_6730_1_17	-	SMRU593
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.1478	39.7	-	CRME01	76	2348	2125	3/22/15	3/4/17	Scaffold	SC	SAMEA1024621	GCA_001191975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/975/GCA_001191975.1_6755_2_20	-	SMRU812
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40023	65.6	-	MMRE01	30	4287	4116	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918703	GCA_001847835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/835/GCA_001847835.1_ASM184783v1	-	03-R0824
Escherichia coli	562	PRJNA381858	381858	Proteobacteria	Gammaproteobacteria	5.38212	50.6	-	NEDK01	267	5645	5162	5/22/17	5/24/17	Contig	LAU	SAMN06689989	GCA_002155755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/755/GCA_002155755.1_ASM215575v1	-	AUH_IMP188
Salmonella enterica subsp. enterica serovar Cerro	340188	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.56399	52.3	-	MYDS01	64	4635	4382	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368539	GCA_002066035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/035/GCA_002066035.1_ASM206603v1	-	BCW_2654
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.86725	32.6	-	CVQR01	33	3006	2883	5/21/15	3/4/17	Contig	SC	SAMEA1324689	GCA_001047875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/875/GCA_001047875.1_7748_4_2	-	USFL002
Staphylococcus aureus	1280	PRJEB8895	282932	Terrabacteria group	Firmicutes	2.9212	32.6	-	CVOQ01	68	3007	2857	5/6/15	3/4/17	Contig	UNIVERSITY OF SCIENCE AND TECHNOLOGY OF CHINA	SAMEA3360369	GCA_001049575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/575/GCA_001049575.1_AH1	-	AH1
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.84131	52.2	-	MYDV01	68	4963	4703	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03357162	GCA_002066045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/045/GCA_002066045.1_ASM206604v1	-	BCW_2650
Escherichia coli	562	PRJNA381859	381859	Proteobacteria	Gammaproteobacteria	4.89653	50.5	-	NEDL01	209	5154	4732	5/22/17	5/24/17	Contig	LAU	SAMN06690112	GCA_002155775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/775/GCA_002155775.1_ASM215577v1	-	AUH_IMP194
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39447	65.6	-	MMRB01	38	4289	4086	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918706	GCA_001847885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/885/GCA_001847885.1_ASM184788v1	-	04-R0594
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.20066	39.7	-	CRBX01	83	2393	2170	3/23/15	3/4/17	Scaffold	SC	SAMEA1024849	GCA_001191995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/995/GCA_001191995.1_6731_1_6	-	SMRU990
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08152	39.7	-	CRIG01	49	2296	2067	3/22/15	3/4/17	Scaffold	SC	SAMEA1025425	GCA_001192015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/015/GCA_001192015.1_6736_8_8	-	SMRU1304
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38547	65.6	-	MMRA01	21	4269	4095	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918707	GCA_001847925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/925/GCA_001847925.1_ASM184792v1	-	04-R0277
Escherichia coli	562	PRJNA381861	381861	Proteobacteria	Gammaproteobacteria	4.93128	50.8	-	NEDM01	269	5193	4757	5/22/17	5/24/17	Contig	LAU	SAMN06690122	GCA_002155825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/825/GCA_002155825.1_ASM215582v1	-	AUH_IMP202
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.67661	52.2	-	MYDW01	65	4742	4521	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03357161	GCA_002066095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/095/GCA_002066095.1_ASM206609v1	-	BCW_2649
Staphylococcus aureus	1280	PRJEB8896	283371	Terrabacteria group	Firmicutes	2.85427	32.6	-	CVOS01	71	2992	2836	5/9/15	3/4/17	Contig	UNIVERSITY OF SCIENCE AND TECHNOLOGY OF CHINA	SAMEA3360370	GCA_001049595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/595/GCA_001049595.1_Staphylococcus_aureus_AH2	-	AH2
Staphylococcus aureus	1280	PRJEB8897	283372	Terrabacteria group	Firmicutes	2.78182	32.6	-	CVOR01	70	2886	2741	5/9/15	3/4/17	Contig	UNIVERSITY OF SCIENCE AND TECHNOLOGY OF CHINA	SAMEA3360371	GCA_001049615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/615/GCA_001049615.1_Staphylococcus_aureus_AH3	-	AH3
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.80922	52.1	-	MYDY01	65	4902	4659	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03357160	GCA_002066105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/105/GCA_002066105.1_ASM206610v1	-	BCW_2646
Escherichia coli	562	PRJNA382619	382619	Proteobacteria	Gammaproteobacteria	5.35535	50.5	-	NCTF01	147	5591	5208	5/22/17	5/24/17	Contig	LAU	SAMN06711132	GCA_002155835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/835/GCA_002155835.1_ASM215583v1	-	MEH_VIC
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37378	65.6	-	MMQY01	16	4237	4078	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918709	GCA_001847965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/847/965/GCA_001847965.1_ASM184796v1	-	06-14433
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.196	39.5	-	CQVW01	67	2439	2219	3/23/15	3/4/17	Scaffold	SC	SAMEA1025567	GCA_001192195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/195/GCA_001192195.1_6710_8_21	-	SMRU1413
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.17455	39.5	-	CRQX01	54	2420	2173	3/23/15	3/4/17	Scaffold	SC	SAMEA1024780	GCA_001192215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/215/GCA_001192215.1_6791_6_3	-	SMRU627
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.32496	65.5	-	MMQX01	36	4248	4065	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918710	GCA_001848005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/005/GCA_001848005.1_ASM184800v1	-	04-R0794
Escherichia coli	562	PRJNA382620	382620	Proteobacteria	Gammaproteobacteria	5.37241	50.5	-	NCTG01	158	5654	5215	5/22/17	5/24/17	Contig	LAU	SAMN06711152	GCA_002155845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/845/GCA_002155845.1_ASM215584v1	-	MEH_META
Salmonella enterica subsp. enterica serovar Bareilly	58096	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.73537	52.2	-	MYDZ01	52	4818	4591	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368534	GCA_002066135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/135/GCA_002066135.1_ASM206613v1	-	BCW_2645
Staphylococcus aureus	1280	PRJEB8898	283373	Terrabacteria group	Firmicutes	2.84591	32.6	-	CVOW01	73	2993	2840	5/9/15	3/4/17	Contig	UNIVERSITY OF SCIENCE AND TECHNOLOGY OF CHINA	SAMEA3360372	GCA_001049635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/635/GCA_001049635.1_Staphylococcus_aureus_SH1	-	SH1
Staphylococcus aureus	1280	PRJEB8899	283374	Terrabacteria group	Firmicutes	2.85658	32.6	-	CVOX01	75	3028	2852	5/9/15	3/4/17	Contig	UNIVERSITY OF SCIENCE AND TECHNOLOGY OF CHINA	SAMEA3360373	GCA_001049655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/655/GCA_001049655.1_Staphylococcus_aureus_SH2	-	SH2
Salmonella enterica subsp. enterica serovar Bonariensis	1173564	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.71172	52.1	-	MYDX01	71	4776	4532	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368535	GCA_002066145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/145/GCA_002066145.1_ASM206614v1	-	BCW_2647
Escherichia coli O112ac:H19	1789664	PRJNA309900	309900	Proteobacteria	Gammaproteobacteria	5.05169	50.7	-	MWPU01	307	5326	4874	5/22/17	5/24/17	Contig	Longgang Center for Disease Control and Prevention in Shenzhen	SAMN04441790	GCA_002156555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/555/GCA_002156555.1_ASM215655v1	24451108	E40
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39244	65.6	-	MMPX01	53	4293	4104	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918737	GCA_001848045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/045/GCA_001848045.1_ASM184804v1	-	98-R394
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11233	39.7	-	CRLR01	55	2350	2126	3/23/15	3/4/17	Scaffold	SC	SAMEA1024978	GCA_001192255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/255/GCA_001192255.1_6755_1_5	-	SMRU773
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.22275	39.4	-	CRLD01	82	2452	2203	3/23/15	3/4/17	Scaffold	SC	SAMEA1024643	GCA_001192275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/275/GCA_001192275.1_6755_1_10	-	SMRU778
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38661	65.6	-	MMPW01	73	4306	4088	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918738	GCA_001848065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/065/GCA_001848065.1_ASM184806v1	-	98-R380
Escherichia coli	562	PRJNA377666	377666	Proteobacteria	Gammaproteobacteria	5.29755	50.5	-	NFKC01	287	5751	5230	5/30/17	6/1/17	Contig	Veterinary Research Institute	SAMN06473654	GCA_002160185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/160/185/GCA_002160185.1_ASM216018v1	-	An190
Salmonella enterica subsp. enterica serovar Bardo	932733	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.02734	52	-	MYEA01	84	5187	4936	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368532	GCA_002066175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/175/GCA_002066175.1_ASM206617v1	-	BCW_2643
Staphylococcus aureus	1280	PRJEB8900	283375	Terrabacteria group	Firmicutes	2.84591	32.6	-	CVOT01	73	2993	2840	5/9/15	3/4/17	Contig	UNIVERSITY OF SCIENCE AND TECHNOLOGY OF CHINA	SAMEA3360372	GCA_001049675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/675/GCA_001049675.1_Staphylococcus_aureus_SH1	-	SH1
Staphylococcus aureus	1280	PRJEB8900	283375	Terrabacteria group	Firmicutes	2.85658	32.6	-	CVOV01	75	3028	2852	5/9/15	3/4/17	Contig	UNIVERSITY OF SCIENCE AND TECHNOLOGY OF CHINA	SAMEA3360373	GCA_001049695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/695/GCA_001049695.1_Staphylococcus_aureus_SH2	-	SH2
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.68672	52.2	-	MYEC01	45	4741	4481	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03357159	GCA_002066185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/185/GCA_002066185.1_ASM206618v1	-	BCW_2641
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.32414	50.3	-	NFQY01	308	5752	5302	6/2/17	6/5/17	Contig	USDA	SAMN06855912	GCA_002164015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/015/GCA_002164015.1_ASM216401v1	-	ARS-CC6335
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39596	65.6	-	MMPV01	50	4302	4112	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918739	GCA_001848085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/085/GCA_001848085.1_ASM184808v1	-	98-R836
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.03223	39.4	-	CRMU01	54	2239	2018	3/22/15	3/4/17	Scaffold	SC	SAMEA1024920	GCA_001192315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/315/GCA_001192315.1_6755_3_18	-	SMRU882
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.0343	39.6	-	CRTU01	82	2227	1992	3/22/15	3/4/17	Scaffold	SC	SAMEA1025210	GCA_001192355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/355/GCA_001192355.1_6805_4_9	-	SMRU1665
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41995	65.6	-	MMPU01	55	4324	4120	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918740	GCA_001848095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/095/GCA_001848095.1_ASM184809v1	-	98-R504
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.28712	50.3	-	NFRA01	293	5671	5242	6/2/17	6/5/17	Contig	USDA	SAMN06855910	GCA_002164025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/025/GCA_002164025.1_ASM216402v1	-	ARS-CC5560
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.95247	52.2	-	MYED01	75	5138	4877	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03357158	GCA_002066195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/195/GCA_002066195.1_ASM206619v1	-	BCW_2639
Staphylococcus aureus	1280	PRJEB8900	283375	Terrabacteria group	Firmicutes	2.83587	32.3	-	CVOP01	21	2848	2682	5/9/15	3/4/17	Contig	UNIVERSITY OF SCIENCE AND TECHNOLOGY OF CHINA	SAMEA3360374	GCA_001049715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/049/715/GCA_001049715.1_Staphylococcus_aureus_SH3	-	SH3
Staphylococcus aureus	1280	PRJNA288632	288632	Terrabacteria group	Firmicutes	2.83858	32.5	-	LFXB01	87	2834	2729	7/9/15	3/4/17	Contig	National Institute of Animal Biotechnology (NIAB)	SAMN03835273	GCA_001051265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/051/265/GCA_001051265.1_ASM105126v1	26294628	BMSA 1
Salmonella enterica subsp. enterica serovar Anatum	58712	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.86701	52.2	-	MYEE01	59	5004	4733	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368529	GCA_002066235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/235/GCA_002066235.1_ASM206623v1	-	BCW_2638
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.3211	50.3	-	NFQZ01	308	5739	5297	6/2/17	6/5/17	Contig	USDA	SAMN06855911	GCA_002164035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/035/GCA_002164035.1_ASM216403v1	-	ARS-CC6195
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39379	65.6	-	MMPT01	15	4288	4128	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918741	GCA_001848115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/115/GCA_001848115.1_ASM184811v1	-	00-R1211
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.19109	39.5	-	CQVL01	63	2449	2211	3/23/15	3/11/17	Scaffold	SC	SAMEA1025472	GCA_001192375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/375/GCA_001192375.1_6710_7_8	-	SMRU1376
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.02391	39.7	-	CRDH01	51	2236	2015	3/23/15	3/11/17	Scaffold	SC	SAMEA1024636	GCA_001192395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/395/GCA_001192395.1_6731_4_12	-	SMRU1068
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40442	65.6	-	MMPP01	35	4293	4110	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918745	GCA_001848165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/165/GCA_001848165.1_ASM184816v1	-	98-20043
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.32295	50.3	-	NFQW01	345	5747	5309	6/2/17	6/5/17	Contig	USDA	SAMN06855914	GCA_002164045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/045/GCA_002164045.1_ASM216404v1	-	ARS-CC7094
Salmonella enterica subsp. enterica serovar Anatum	58712	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.75892	52.1	-	MYEF01	58	4878	4644	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368528	GCA_002066255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/255/GCA_002066255.1_ASM206625v1	-	BCW_2637
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.71083	32.6	-	JWFK01	208	2805	2702	7/10/15	3/4/17	Contig	University of Washington	SAMN03196998	GCA_001060095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/095/GCA_001060095.1_ASM106009v1	26230489	1033_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.81542	32.7	-	JWFO01	149	2964	2799	7/10/15	3/4/17	Contig	University of Washington	SAMN03196994	GCA_001060125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/125/GCA_001060125.1_ASM106012v1	26230489	103_SAUR
Salmonella enterica subsp. enterica serovar Amager	1967989	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.86188	52.1	-	MYEH01	50	4992	4756	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368526	GCA_002066265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/265/GCA_002066265.1_ASM206626v1	-	BCW_2635
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.29401	50.3	-	NFRD01	297	5680	5240	6/2/17	6/5/17	Contig	USDA	SAMN06855907	GCA_002164095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/095/GCA_002164095.1_ASM216409v1	-	ARS-CC5552
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35506	65.6	-	MMPQ01	21	4250	4083	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918744	GCA_001848185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/185/GCA_001848185.1_ASM184818v1	-	99-R396
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.17116	39.7	-	CRXH01	69	2353	2090	3/23/15	3/11/17	Scaffold	SC	SAMEA1025541	GCA_001192475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/475/GCA_001192475.1_6807_2_18	-	SMRU1602
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12068	39.6	-	CRJV01	63	2354	2115	3/23/15	3/11/17	Scaffold	SC	SAMEA1025534	GCA_001192595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/595/GCA_001192595.1_6753_3_12	-	SMRU1524
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38442	65.6	-	MMPO01	36	4290	4100	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918746	GCA_001848215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/215/GCA_001848215.1_ASM184821v1	-	99-10380
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.29054	50.3	-	NFRG01	275	5666	5244	6/2/17	6/5/17	Contig	USDA	SAMN06855904	GCA_002164105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/105/GCA_002164105.1_ASM216410v1	-	ARS-CC5548
Salmonella enterica subsp. enterica serovar Arizonae	1967987	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.65753	51.4	-	MYEQ01	88	4700	4231	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368520	GCA_002066295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/295/GCA_002066295.1_ASM206629v1	-	BCW_2622
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.73292	32.7	-	JWEA01	127	2842	2733	7/10/15	3/4/17	Contig	University of Washington	SAMN03197034	GCA_001060225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/225/GCA_001060225.1_ASM106022v1	26230489	1071_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.82366	32.8	-	JWDD01	161	2967	2838	7/10/15	3/4/17	Contig	University of Washington	SAMN03197057	GCA_001060265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/265/GCA_001060265.1_ASM106026v1	26230489	1095_SAUR
Salmonella enterica subsp. enterica serovar Montevideo	115981	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72696	52.1	-	MYET01	57	4812	4559	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368516	GCA_002066305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/305/GCA_002066305.1_ASM206630v1	-	BCW_2615
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.28907	50.3	-	NFRE01	284	5669	5228	6/2/17	6/5/17	Contig	USDA	SAMN06855906	GCA_002164115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/115/GCA_002164115.1_ASM216411v1	-	ARS-CC5550
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38233	65.6	-	MMPN01	54	4292	4097	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918747	GCA_001848245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/245/GCA_001848245.1_ASM184824v1	-	99-R127
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.11218	39.7	-	CRJA01	58	2271	1986	3/23/15	3/11/17	Scaffold	SC	SAMEA1025665	GCA_001192635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/635/GCA_001192635.1_6753_1_5	-	SMRU1469
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07621	39.6	-	CRGL01	74	2313	2083	3/23/15	3/10/17	Scaffold	SC	SAMEA1025650	GCA_001192975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/975/GCA_001192975.1_6736_6_12	-	SMRU1260
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39671	65.6	-	MMPL01	50	4297	4115	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918749	GCA_001848255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/255/GCA_001848255.1_ASM184825v1	-	99-R545
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.28842	50.3	-	NFRH01	272	5658	5233	6/2/17	6/5/17	Contig	USDA	SAMN06855903	GCA_002164125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/125/GCA_002164125.1_ASM216412v1	-	ARS-CC5546
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.74592	52.1	-	MYEZ01	34	4858	4608	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03357152	GCA_002066335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/335/GCA_002066335.1_ASM206633v1	-	BCW_2570
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.7109	32.7	-	JWAY01	108	2792	2678	7/10/15	3/4/17	Contig	University of Washington	SAMN03197114	GCA_001060415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/415/GCA_001060415.1_ASM106041v1	26230489	1158_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.86747	32.6	-	JVYN01	157	3011	2887	7/10/15	3/4/17	Contig	University of Washington	SAMN03197177	GCA_001060575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/575/GCA_001060575.1_ASM106057v1	26230489	1214_SAUR
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.65376	52.1	-	MYEX01	1172	5198	4337	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368142	GCA_002066345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/345/GCA_002066345.1_ASM206634v1	-	SAL3385
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.2871	50.3	-	NFRJ01	294	5676	5241	6/2/17	6/5/17	Contig	USDA	SAMN06855901	GCA_002164175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/175/GCA_002164175.1_ASM216417v1	-	ARS-CC5539
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39031	65.6	-	MMPM01	43	4297	4110	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918748	GCA_001848265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/265/GCA_001848265.1_ASM184826v1	-	01-R0266
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14121	39.5	-	CRDC01	69	2370	2148	3/23/15	3/11/17	Scaffold	SC	SAMEA1025037	GCA_001192995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/995/GCA_001192995.1_6731_3_5	-	SMRU1037
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08235	39.6	-	CRCP01	56	2312	2094	3/23/15	3/11/17	Scaffold	SC	SAMEA1024828	GCA_001193095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/095/GCA_001193095.1_6731_3_10	-	SMRU1042
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36179	65.6	-	MMPF01	28	4261	4076	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918755	GCA_001848405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/405/GCA_001848405.1_ASM184840v1	-	03-R0324
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.28989	50.3	-	NFRI01	302	5673	5243	6/2/17	6/5/17	Contig	USDA	SAMN06855902	GCA_002164185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/185/GCA_002164185.1_ASM216418v1	-	ARS-CC5545
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.696	52.1	-	MYFA01	48	4812	4553	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03357151	GCA_002066375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/375/GCA_002066375.1_ASM206637v1	-	BCW_2569
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.70915	32.7	-	JVXF01	117	2797	2678	7/10/15	3/4/17	Contig	University of Washington	SAMN03197211	GCA_001060665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/665/GCA_001060665.1_ASM106066v1	26230489	1245_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.77493	32.7	-	JWDW01	162	2906	2788	7/10/15	3/4/17	Contig	University of Washington	SAMN03197038	GCA_001060905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/905/GCA_001060905.1_ASM106090v1	26230489	1075_SAUR
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72973	52.1	-	MYFB01	40	4852	4595	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03357150	GCA_002066395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/395/GCA_002066395.1_ASM206639v1	-	BCW_2568
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.28974	50.3	-	NFRM01	280	5665	5241	6/2/17	6/5/17	Contig	USDA	SAMN06855898	GCA_002164195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/195/GCA_002164195.1_ASM216419v1	-	ARS-CC5530
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38419	65.6	-	MMPC01	27	4276	4095	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918758	GCA_001848445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/445/GCA_001848445.1_ASM184844v1	-	02-R0948
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.21083	39.5	-	CRQH01	52	2466	2232	3/23/15	3/10/17	Scaffold	SC	SAMEA1024947	GCA_001193175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/175/GCA_001193175.1_6775_2_3	-	SMRU843
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.22728	39.6	-	CRWR01	49	2439	2226	3/22/15	3/10/17	Scaffold	SC	SAMEA1025302	GCA_001193315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/315/GCA_001193315.1_6807_1_8	-	SMRU1568
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39899	65.6	-	MMOX01	2	4268	4105	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918763	GCA_001848555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/555/GCA_001848555.1_ASM184855v1	-	01-R0954
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.29315	50.3	-	NFRN01	293	5681	5247	6/2/17	6/5/17	Contig	USDA	SAMN06855897	GCA_002164205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/205/GCA_002164205.1_ASM216420v1	-	ARS-CC5526
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.68507	52.1	-	MYFC01	992	5242	4430	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368131	GCA_002066415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/415/GCA_002066415.1_ASM206641v1	-	SAL3369
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.73198	32.7	-	JWDX01	148	2841	2732	7/10/15	3/4/17	Contig	University of Washington	SAMN03197037	GCA_001060915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/915/GCA_001060915.1_ASM106091v1	26230489	1074_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.77492	32.7	-	JWDV01	174	2914	2787	7/10/15	3/4/17	Contig	University of Washington	SAMN03197039	GCA_001060955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/955/GCA_001060955.1_ASM106095v1	26230489	1076_SAUR
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70202	52.1	-	MYCX01	42	4809	4553	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368563	GCA_002066435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/435/GCA_002066435.1_ASM206643v1	-	BCW_2685
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.28864	50.3	-	NFRO01	282	5678	5247	6/2/17	6/5/17	Contig	USDA	SAMN06855896	GCA_002164255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/255/GCA_002164255.1_ASM216425v1	-	ARS-CC5525
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39427	65.6	-	MMOS01	3	4267	4093	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918768	GCA_001848655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/655/GCA_001848655.1_ASM184865v1	-	02-R1951
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.22634	39.5	-	CRHG01	39	2476	2224	3/22/15	3/4/17	Scaffold	SC	SAMEA1025543	GCA_001193335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/335/GCA_001193335.1_6736_7_16	-	SMRU1288
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07327	39.6	-	CQXN01	70	2250	2000	3/22/15	3/4/17	Scaffold	SC	SAMEA1024662	GCA_001193395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/395/GCA_001193395.1_6730_1_24	-	SMRU600
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39169	65.6	-	MMOO01	42	4274	4097	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918772	GCA_001848725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/848/725/GCA_001848725.1_ASM184872v1	-	01-R0711
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.4193	50.3	-	NFRT01	358	5888	5419	6/2/17	6/5/17	Contig	USDA	SAMN06855891	GCA_002164275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/275/GCA_002164275.1_ASM216427v1	-	ARS-CC2248
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7475	52.1	-	MYFD01	47	4865	4611	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03357149	GCA_002066455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/455/GCA_002066455.1_ASM206645v1	-	BCW_2566
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.77497	32.7	-	JWDU01	164	2914	2791	7/10/15	3/4/17	Contig	University of Washington	SAMN03197040	GCA_001060975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/975/GCA_001060975.1_ASM106097v1	26230489	1077_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.75062	32.7	-	JWCZ01	129	2857	2740	7/10/15	3/4/17	Contig	University of Washington	SAMN03197061	GCA_001060985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/985/GCA_001060985.1_ASM106098v1	26230489	1099_SAUR
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.79518	51.4	-	MYEL01	70	4771	4374	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03357156	GCA_002066465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/465/GCA_002066465.1_ASM206646v1	-	BCW_2629
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.2721	50.3	-	NFRR01	292	5634	5218	6/2/17	6/5/17	Contig	USDA	SAMN06855893	GCA_002164285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/285/GCA_002164285.1_ASM216428v1	-	ARS-CC5541
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41109	65.6	-	MMKO01	24	4298	4114	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916387	GCA_001849005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/005/GCA_001849005.1_ASM184900v1	-	02-R1491
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08475	39.7	-	CQVH01	53	2305	2090	3/23/15	3/4/17	Scaffold	SC	SAMEA1025353	GCA_001193415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/415/GCA_001193415.1_6710_7_19	-	SMRU1387
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.15668	39.5	-	CRCS01	59	2398	2160	3/23/15	3/4/17	Scaffold	SC	SAMEA1024852	GCA_001193435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/435/GCA_001193435.1_6731_3_11	-	SMRU1043
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39474	65.6	-	MMKS01	30	4302	4118	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916383	GCA_001849055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/055/GCA_001849055.1_ASM184905v1	-	01-R1017
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.29044	50.3	-	NFRS01	284	5675	5239	6/2/17	6/5/17	Contig	USDA	SAMN06855892	GCA_002164295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/295/GCA_002164295.1_ASM216429v1	-	ARS-CC5318
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69271	52.1	-	MYCY01	35	4801	4546	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368562	GCA_002066495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/495/GCA_002066495.1_ASM206649v1	-	BCW_2684
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.76779	32.8	-	JWDJ01	125	2890	2773	7/10/15	3/4/17	Contig	University of Washington	SAMN03197051	GCA_001060995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/995/GCA_001060995.1_ASM106099v1	26230489	1089_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.82379	32.8	-	JWCL01	164	2969	2840	7/10/15	3/4/17	Contig	University of Washington	SAMN03197075	GCA_001061035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/035/GCA_001061035.1_ASM106103v1	26230489	1120_SAUR
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.95957	52.1	-	MYEO01	57	5119	4870	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368522	GCA_002066505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/505/GCA_002066505.1_ASM206650v1	-	BCW_2626
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.32562	50.3	-	NFRU01	309	5744	5299	6/2/17	6/5/17	Contig	USDA	SAMN06855890	GCA_002164335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/335/GCA_002164335.1_ASM216433v1	-	ARS-CC2207
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.394	65.6	-	MMKR01	32	4284	4120	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916384	GCA_001849085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/085/GCA_001849085.1_ASM184908v1	-	01-R0267
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09511	39.7	-	CRJW01	48	2321	2096	3/22/15	3/4/17	Scaffold	SC	SAMEA1025674	GCA_001193495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/495/GCA_001193495.1_6753_3_1	-	SMRU1513
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.1279	39.6	-	CRTT01	64	2338	2092	3/23/15	3/4/17	Scaffold	SC	SAMEA1025193	GCA_001193535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/535/GCA_001193535.1_6805_4_8	-	SMRU1664
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39589	65.6	-	MMJA01	18	4272	4104	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916427	GCA_001849205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/205/GCA_001849205.1_ASM184920v1	-	01-R0262
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.44711	50.3	-	NFRV01	362	5940	5464	6/2/17	6/5/17	Contig	USDA	SAMN06855889	GCA_002164355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/355/GCA_002164355.1_ASM216435v1	-	ARS-CC2205
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.791	52.2	-	MYDA01	69	4962	4648	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368560	GCA_002066535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/535/GCA_002066535.1_ASM206653v1	-	BCW_2681
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.73589	32.6	-	JWBS01	144	2842	2727	7/10/15	3/4/17	Contig	University of Washington	SAMN03197094	GCA_001061075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/075/GCA_001061075.1_ASM106107v1	26230489	1139.rep2_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.71141	32.7	-	JVZZ01	85	2793	2684	7/10/15	3/4/17	Contig	University of Washington	SAMN03197139	GCA_001061135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/135/GCA_001061135.1_ASM106113v1	26230489	1181_SAUR
Salmonella enterica subsp. enterica serovar Derby	28144	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.85041	52	-	MYDG01	76	4949	4682	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368554	GCA_002066555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/555/GCA_002066555.1_ASM206655v1	-	BCW_2674
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.37744	50.3	-	NFRX01	360	5852	5386	6/2/17	6/5/17	Contig	USDA	SAMN06855887	GCA_002164365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/365/GCA_002164365.1_ASM216436v1	-	ARS-CC2203
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.4041	65.6	-	MMIV01	16	4290	4127	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916432	GCA_001849295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/295/GCA_001849295.1_ASM184929v1	-	01-R0153
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.16391	39.5	-	CRMW01	53	2404	2182	3/23/15	3/4/17	Scaffold	SC	SAMEA1024894	GCA_001193555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/555/GCA_001193555.1_6755_3_20	-	SMRU884
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.04503	39.6	-	CRRQ01	45	2244	2016	3/23/15	3/4/17	Scaffold	SC	SAMEA1024906	GCA_001193575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/575/GCA_001193575.1_6805_1_23	-	SMRU1031
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39558	65.6	-	MMIQ01	11	4267	4109	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916437	GCA_001849365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/365/GCA_001849365.1_ASM184936v1	-	02-R1458
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.40376	50.2	-	NFRW01	313	5833	5411	6/2/17	6/5/17	Contig	USDA	SAMN06855888	GCA_002164375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/375/GCA_002164375.1_ASM216437v1	-	ARS-CC2204
Salmonella enterica subsp. enterica serovar Corvallis	593905	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.73504	52.1	-	MYDJ01	33	4787	4516	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368550	GCA_002066565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/565/GCA_002066565.1_ASM206656v1	-	BCW_2669
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.86543	32.6	-	JVYM01	152	3015	2891	7/10/15	3/4/17	Contig	University of Washington	SAMN03197178	GCA_001061235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/235/GCA_001061235.1_ASM106123v1	26230489	1215_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.79538	32.7	-	JVWS01	127	2896	2736	7/10/15	3/4/17	Contig	University of Washington	SAMN03197224	GCA_001061355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/355/GCA_001061355.1_ASM106135v1	26230489	1257_SAUR
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.86708	52.1	-	MYDF01	223	5100	4684	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368555	GCA_002066575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/575/GCA_002066575.1_ASM206657v1	-	BCW_2676
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.37529	50.3	-	NFRY01	355	5829	5361	6/2/17	6/5/17	Contig	USDA	SAMN06855886	GCA_002164415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/415/GCA_002164415.1_ASM216441v1	-	ARS-CC2601
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37156	65.6	-	MMJJ01	9	4243	4080	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916418	GCA_001849425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/425/GCA_001849425.1_ASM184942v1	-	98-R452
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11551	39.6	-	CRMZ01	83	2353	2106	3/22/15	3/4/17	Scaffold	SC	SAMEA1025062	GCA_001193595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/595/GCA_001193595.1_6755_3_7	-	SMRU871
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07251	39.8	-	CRAW01	59	2313	2077	3/23/15	3/4/17	Scaffold	SC	SAMEA1024698	GCA_001193635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/635/GCA_001193635.1_6730_7_6	-	SMRU702
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39839	65.6	-	MMJG01	9	4274	4102	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916421	GCA_001849485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/485/GCA_001849485.1_ASM184948v1	-	99-R217
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.32376	50.3	-	NFQV01	349	5747	5302	6/2/17	6/5/17	Contig	USDA	SAMN06855915	GCA_002164435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/435/GCA_002164435.1_ASM216443v1	-	ARS-CC7983
Salmonella enterica subsp. enterica serovar Colindale	1967991	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70084	52.1	-	MYDN01	55	4766	4528	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368542	GCA_002066615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/615/GCA_002066615.1_ASM206661v1	-	BCW_2661
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.7845	33.4	-	JVUC01	280	2864	2715	7/10/15	3/4/17	Contig	University of Washington	SAMN03197292	GCA_001061525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/525/GCA_001061525.1_ASM106152v1	26230489	1315_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.82803	32.7	-	JWGE01	203	2936	2802	7/10/15	3/4/17	Contig	University of Washington	SAMN03196978	GCA_001061735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/735/GCA_001061735.1_ASM106173v1	26230489	1016_SAUR
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7732	52	-	MYDT01	65	4877	4620	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03357163	GCA_002066635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/635/GCA_002066635.1_ASM206663v1	-	BCW_2653
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.32073	50.3	-	NFQX01	301	5738	5303	6/2/17	6/5/17	Contig	USDA	SAMN06855913	GCA_002164445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/445/GCA_002164445.1_ASM216444v1	-	ARS-CC6338
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39624	65.6	-	MMKJ01	26	4289	4089	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916392	GCA_001849605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/605/GCA_001849605.1_ASM184960v1	-	02-R0109
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.0907	39.7	-	CRNE01	73	2257	2016	3/23/15	3/4/17	Scaffold	SC	SAMEA1025065	GCA_001193695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/695/GCA_001193695.1_6755_3_8	-	SMRU872
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99193	39.7	-	CQRM01	41	2215	1994	3/22/15	3/4/17	Scaffold	SC	SAMEA970201	GCA_001193815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/815/GCA_001193815.1_5159_8_11	-	BHN657
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38553	65.6	-	MMKB01	22	4279	4100	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916400	GCA_001849785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/785/GCA_001849785.1_ASM184978v1	-	02-R1742
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.29351	50.3	-	NFRB01	297	5675	5246	6/2/17	6/5/17	Contig	USDA	SAMN06855909	GCA_002164455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/455/GCA_002164455.1_ASM216445v1	-	ARS-CC5555
Salmonella enterica subsp. enterica serovar Augustenborg	1151174	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72007	52.2	-	MYEB01	112	4843	4561	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368531	GCA_002066645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/645/GCA_002066645.1_ASM206664v1	-	BCW_2642
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.77506	32.7	-	JWDT01	167	2910	2785	7/10/15	3/4/17	Contig	University of Washington	SAMN03197041	GCA_001061855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/855/GCA_001061855.1_ASM106185v1	26230489	1078_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.78572	32.7	-	JWDG01	162	2884	2753	7/10/15	3/4/17	Contig	University of Washington	SAMN03197054	GCA_001061935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/935/GCA_001061935.1_ASM106193v1	26230489	1091_SAUR
Salmonella enterica subsp. enterica serovar Amager	1967989	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.31416	51.9	-	MYEG01	135	5603	5255	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368527	GCA_002066665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/665/GCA_002066665.1_ASM206666v1	-	BCW_2636
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.2893	50.3	-	NFRC01	288	5669	5238	6/2/17	6/5/17	Contig	USDA	SAMN06855908	GCA_002164465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/465/GCA_002164465.1_ASM216446v1	-	ARS-CC5587
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37653	65.6	-	MMJR01	76	4280	4103	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916410	GCA_001849965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/849/965/GCA_001849965.1_ASM184996v1	-	01-R1455
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08501	39.5	-	CRTA01	51	2293	2063	3/23/15	3/4/17	Scaffold	SC	SAMEA1025405	GCA_001193875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/875/GCA_001193875.1_6805_3_6	-	SMRU1446
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.98809	39.7	-	CRYP01	48	2207	1996	3/22/15	3/4/17	Scaffold	SC	SAMEA970297	GCA_001193895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/895/GCA_001193895.1_5242_8_9	-	BHN598
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40153	65.6	-	MMIG01	16	4293	4108	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916447	GCA_001850155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/155/GCA_001850155.1_ASM185015v1	-	02-R0947
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.28869	50.3	-	NFRK01	277	5672	5237	6/2/17	6/5/17	Contig	USDA	SAMN06855900	GCA_002164515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/515/GCA_002164515.1_ASM216451v1	-	ARS-CC5536
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72348	52.1	-	MYEJ01	70	4766	4528	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03357157	GCA_002066685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/685/GCA_002066685.1_ASM206668v1	-	BCW_2632
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.7675	32.8	-	JWDC01	120	2885	2769	7/10/15	3/4/17	Contig	University of Washington	SAMN03197058	GCA_001061955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/955/GCA_001061955.1_ASM106195v1	26230489	1096_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.83257	32.8	-	JWCK01	127	2962	2847	7/10/15	3/4/17	Contig	University of Washington	SAMN03197076	GCA_001061965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/965/GCA_001061965.1_ASM106196v1	26230489	1121_SAUR
Salmonella enterica subsp. enterica serovar Abaeeteuba	1967988	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.14963	52.1	-	MYEK01	213	5401	4993	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368524	GCA_002066715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/715/GCA_002066715.1_ASM206671v1	-	1350/12
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.29186	50.3	-	NFRL01	299	5679	5238	6/2/17	6/5/17	Contig	USDA	SAMN06855899	GCA_002164525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/525/GCA_002164525.1_ASM216452v1	-	ARS-CC5534
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38667	65.6	-	MMIE01	15	4273	4093	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916449	GCA_001850245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/245/GCA_001850245.1_ASM185024v1	-	02-R0951
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14246	39.5	-	CRPH01	77	2384	2137	3/22/15	3/11/17	Scaffold	SC	SAMEA1024633	GCA_001193915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/915/GCA_001193915.1_6775_1_12	-	SMRU828
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10604	39.7	-	CQXW01	62	2260	2007	3/22/15	3/10/17	Scaffold	SC	SAMEA1024771	GCA_001194035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/035/GCA_001194035.1_6730_3_12	-	SMRU612
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40652	65.6	-	MMHZ01	6	4287	4117	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916454	GCA_001850345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/345/GCA_001850345.1_ASM185034v1	-	02-R1944
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.28514	50.3	-	NFRQ01	294	5668	5241	6/2/17	6/5/17	Contig	USDA	SAMN06855894	GCA_002164535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/535/GCA_002164535.1_ASM216453v1	-	ARS-CC5513
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.95701	52.2	-	MYEM01	85	5127	4869	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03357155	GCA_002066725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/725/GCA_002066725.1_ASM206672v1	-	BCW_2628
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.75035	32.7	-	JWCA01	116	2860	2743	7/10/15	3/4/17	Contig	University of Washington	SAMN03197086	GCA_001062005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/005/GCA_001062005.1_ASM106200v1	26230489	1132_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.75123	32.7	-	JWBB01	134	2861	2735	7/10/15	3/4/17	Contig	University of Washington	SAMN03197111	GCA_001062075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/075/GCA_001062075.1_ASM106207v1	26230489	1155_SAUR
Salmonella enterica subsp. enterica	59201	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.77165	52.1	-	MYEN01	70	4942	4567	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368523	GCA_002066745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/745/GCA_002066745.1_ASM206674v1	-	BCW_2627
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.29084	50.3	-	NFRP01	290	5675	5242	6/2/17	6/5/17	Contig	USDA	SAMN06855895	GCA_002164545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/545/GCA_002164545.1_ASM216454v1	-	ARS-CC5517
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37917	65.6	-	MMZP01	14	4253	4084	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916228	GCA_001850625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/625/GCA_001850625.1_ASM185062v1	-	01-R1278
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14583	39.6	-	CREU01	78	2405	2144	3/22/15	3/10/17	Scaffold	SC	SAMEA1025069	GCA_001194075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/075/GCA_001194075.1_6731_6_18	-	SMRU1122
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10506	39.7	-	CRMH01	69	2299	2067	3/23/15	3/11/17	Scaffold	SC	SAMEA1025073	GCA_001194115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/115/GCA_001194115.1_6755_2_3	-	SMRU795
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38968	65.6	-	MMZI01	20	4275	4088	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916235	GCA_001850765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/765/GCA_001850765.1_ASM185076v1	-	01-R1505
Escherichia coli	562	PRJNA385001	385001	Proteobacteria	Gammaproteobacteria	5.28765	50.3	-	NFRF01	296	5679	5253	6/2/17	6/5/17	Contig	USDA	SAMN06855905	GCA_002165415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/415/GCA_002165415.1_ASM216541v1	-	ARS-CC5549
Salmonella enterica subsp. enterica serovar Reading	165302	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.56721	52.2	-	MYEP01	26	4627	4386	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368521	GCA_002066775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/775/GCA_002066775.1_ASM206677v1	-	BCW_2623
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.96936	32.6	-	JVZJ01	186	3112	2970	7/10/15	3/4/17	Contig	University of Washington	SAMN03197155	GCA_001062275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/275/GCA_001062275.1_ASM106227v1	26230489	1195_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.8653	32.6	-	JVXZ01	162	3010	2885	7/10/15	3/4/17	Contig	University of Washington	SAMN03197191	GCA_001062355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/355/GCA_001062355.1_ASM106235v1	26230489	1227_SAUR
"Salmonella enterica subsp. enterica serovar 4,[5],12:i:-"	440524	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.90489	52.2	-	MYER01	58	5051	4810	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368518	GCA_002066795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/795/GCA_002066795.1_ASM206679v1	-	BCW_2618
Escherichia coli	562	PRJNA382501	382501	Proteobacteria	Gammaproteobacteria	5.26337	50.7	-	NEKF02	266	5623	5215	6/6/17	7/28/17	Contig	USFDA	SAMN06706971	GCA_002173115.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/115/GCA_002173115.2_ASM217311v2	-	2013-6-48C
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40081	65.6	-	MMZE01	14	4279	4114	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916239	GCA_001850845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/845/GCA_001850845.1_ASM185084v1	-	02-R0142
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.15452	39.5	-	CRTI01	61	2384	2131	3/22/15	3/10/17	Scaffold	SC	SAMEA1025305	GCA_001194145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/145/GCA_001194145.1_6805_4_20	-	SMRU1676
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08769	39.7	-	CRXN01	71	2301	2080	3/23/15	3/10/17	Scaffold	SC	SAMEA1025257	GCA_001194205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/205/GCA_001194205.1_6807_2_7	-	SMRU1591
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39468	65.6	-	MMZD01	12	4264	4100	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916240	GCA_001850855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/855/GCA_001850855.1_ASM185085v1	-	02-R0099
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.21903	50.6	-	NEKE01	302	5567	5169	6/6/17	6/23/17	Contig	FDA/CFSAN	SAMN06759964	GCA_002173125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/125/GCA_002173125.1_ASM217312v1	-	2013-6-685A
Salmonella enterica subsp. enterica serovar Mbandaka	192954	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.76715	52	-	MYES01	47	4868	4617	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368517	GCA_002066805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/805/GCA_002066805.1_ASM206680v1	-	BCW_2617
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.79594	32.7	-	JVWR01	135	2899	2739	7/10/15	3/4/17	Contig	University of Washington	SAMN03197225	GCA_001062475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/475/GCA_001062475.1_ASM106247v1	26230489	1258_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.80352	32.7	-	JVWK01	120	2902	2739	7/10/15	3/4/17	Contig	University of Washington	SAMN03197232	GCA_001062555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/555/GCA_001062555.1_ASM106255v1	26230489	1264_SAUR
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.93992	52.1	-	MYEU01	148	5065	4829	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368164	GCA_002066815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/815/GCA_002066815.1_ASM206681v1	-	6623
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.95224	50.5	-	NEKG01	83	5111	4842	6/6/17	6/23/17	Contig	FDA/CFSAN	SAMN06759967	GCA_002173145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/145/GCA_002173145.1_ASM217314v1	-	2013-6-380B
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.42021	65.6	-	MMYY01	2	4299	4134	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916245	GCA_001850975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/850/975/GCA_001850975.1_ASM185097v1	-	02-R0115
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14975	39.5	-	CRAF01	72	2357	2105	3/22/15	3/11/17	Scaffold	SC	SAMEA1025054	GCA_001194325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/325/GCA_001194325.1_6730_6_24	-	SMRU696
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.0391	39.6	-	CRDF01	71	2229	2014	3/23/15	3/10/17	Scaffold	SC	SAMEA1024775	GCA_001194345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/345/GCA_001194345.1_6731_4_1	-	SMRU1057
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3791	65.6	-	MMYK01	10	4262	4068	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916259	GCA_001851245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/245/GCA_001851245.1_ASM185124v1	-	01-R0774
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.02918	50.5	-	NEKH01	122	5186	4917	6/6/17	6/23/17	Contig	FDA/CFSAN	SAMN06759966	GCA_002173155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/155/GCA_002173155.1_ASM217315v1	-	2013-6-289D
"Salmonella enterica subsp. indica serovar 1,6,14:a:e,n,x"	1967993	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66376	51.8	-	MYEV01	60	4687	4372	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368159	GCA_002066855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/855/GCA_002066855.1_ASM206685v1	-	396-83
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.71606	32.8	-	JVCO01	58	2779	2678	7/10/15	3/4/17	Contig	University of Washington	SAMN03197748	GCA_001063675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/675/GCA_001063675.1_ASM106367v1	26230489	55_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.77139	32.7	-	JVIV01	87	2867	2733	7/10/15	3/4/17	Contig	University of Washington	SAMN03197585	GCA_001064795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/795/GCA_001064795.1_ASM106479v1	26230489	394_SAUR
"Salmonella enterica subsp. indica serovar 11:b:e,n,x"	1307499	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7146	51.6	-	MYEW01	99	4746	4391	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368158	GCA_002066875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/875/GCA_002066875.1_ASM206687v1	-	347-78
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.30239	50.7	-	NEKL01	353	5686	5253	6/6/17	6/23/17	Contig	FDA/CFSAN	SAMN06759963	GCA_002173195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/195/GCA_002173195.1_ASM217319v1	-	2013-6-148B
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39559	65.6	-	MMXS01	11	4274	4100	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916277	GCA_001851595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/595/GCA_001851595.1_ASM185159v1	-	01-R1504
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.11075	39.7	-	CRIV01	71	2350	2128	3/23/15	3/11/17	Scaffold	SC	SAMEA1025217	GCA_001194385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/385/GCA_001194385.1_6753_1_23	-	SMRU1487
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.04762	39.5	-	CRJT01	67	2258	2031	3/22/15	3/11/17	Scaffold	SC	SAMEA1025403	GCA_001194625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/625/GCA_001194625.1_6753_2_7	-	SMRU1496
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38133	65.6	-	MMXQ01	10	4254	4090	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916279	GCA_001851655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/655/GCA_001851655.1_ASM185165v1	-	02-R0364
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.84571	50.5	-	NEKI01	152	5032	4719	6/6/17	6/23/17	Contig	FDA/CFSAN	SAMN06759968	GCA_002173205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/205/GCA_002173205.1_ASM217320v1	-	2013-6-210A
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.72982	52.1	-	MYEY01	30	4846	4591	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03357153	GCA_002066885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/885/GCA_002066885.1_ASM206688v1	-	BCW_2577
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.75347	32.7	-	JVGF01	69	2851	2744	7/10/15	3/4/17	Contig	University of Washington	SAMN03197653	GCA_001065015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/015/GCA_001065015.1_ASM106501v1	26230489	46_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.88156	32.6	-	JVDX01	118	3038	2930	7/10/15	3/4/17	Contig	University of Washington	SAMN03197713	GCA_001065315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/315/GCA_001065315.1_ASM106531v1	26230489	519_SAUR
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.63254	52.2	-	MXRB01	524	4928	4378	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368804	GCA_002066895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/895/GCA_002066895.1_ASM206689v1	-	BCW_3987
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.7131	50.7	-	NEKJ01	115	4825	4565	6/6/17	6/23/17	Contig	FDA/CFSAN	SAMN06759965	GCA_002173215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/215/GCA_002173215.1_ASM217321v1	-	2013-6-193B
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40005	65.6	-	MMXD01	66	4314	4111	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916292	GCA_001851885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/885/GCA_001851885.1_ASM185188v1	-	01-R1453
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.13215	39.3	-	CRBM01	76	2330	2089	3/23/15	3/10/17	Scaffold	SC	SAMEA1024591	GCA_001194665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/665/GCA_001194665.1_6730_8_8	-	SMRU728
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11691	39.6	-	CRNL01	61	2328	2062	3/22/15	3/14/17	Scaffold	SC	SAMEA1024658	GCA_001194785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/785/GCA_001194785.1_6755_4_18	-	SMRU1146
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38047	65.5	-	MMXC01	92	4304	4118	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916293	GCA_001851925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/925/GCA_001851925.1_ASM185192v1	-	02-R1589
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.19845	50.6	-	NEKM01	932	5183	4937	6/6/17	6/23/17	Contig	FDA/CFSAN	SAMN06759970	GCA_002173255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/255/GCA_002173255.1_ASM217325v1	-	2013-6-140D
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.47652	51.5	-	MXVA01	43	4492	4042	3/22/17	3/24/17	Contig	University of California at Davis	SAMN03358770	GCA_002066925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/925/GCA_002066925.1_ASM206692v1	-	BCW_3052
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.82509	32.8	-	JVCB01	60	2953	2822	7/10/15	3/4/17	Contig	University of Washington	SAMN03197761	GCA_001065435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/435/GCA_001065435.1_ASM106543v1	26230489	561_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.88821	32.8	-	JVBP01	98	3020	2854	7/10/15	3/4/17	Contig	University of Washington	SAMN03197773	GCA_001065445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/445/GCA_001065445.1_ASM106544v1	26230489	571_SAUR
Salmonella enterica subsp. enterica serovar Wippra	1969920	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.62612	52.1	-	MXVO01	111	4644	4369	3/22/17	3/24/17	Contig	University of California at Davis	SAMN02368767	GCA_002066965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/066/965/GCA_002066965.1_ASM206696v1	-	BCW_2903
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.26904	50.7	-	NEKN01	329	5614	5180	6/6/17	6/23/17	Contig	FDA/CFSAN	SAMN06759962	GCA_002173265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/265/GCA_002173265.1_ASM217326v1	-	2013-6-122E
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38507	65.5	-	MMWZ01	67	4298	4101	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916296	GCA_001851935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/935/GCA_001851935.1_ASM185193v1	-	03-R0879
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14401	39.5	-	CQZV01	88	2411	2170	3/23/15	3/10/17	Scaffold	SC	SAMEA1024551	GCA_001194805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/805/GCA_001194805.1_6730_6_10	-	SMRU682
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.24758	39.6	-	CRHI01	76	2473	2217	3/23/15	3/4/17	Scaffold	SC	SAMEA1025445	GCA_001194945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/945/GCA_001194945.1_6736_7_2	-	SMRU1274
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34778	65.6	-	MMXA01	24	4249	4074	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916295	GCA_001851955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/851/955/GCA_001851955.1_ASM185195v1	-	03-R0319
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.9897	50.7	-	NEKO01	150	5254	4923	6/6/17	6/23/17	Contig	FDA/CFSAN	SAMN06759975	GCA_002173275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/275/GCA_002173275.1_ASM217327v1	-	2012C-3400
Salmonella enterica subsp. enterica serovar Albany	211968	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89726	52	-	MYEI01	67	4978	4733	3/22/17	3/25/17	Contig	University of California at Davis	SAMN02368525	GCA_002071615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/071/615/GCA_002071615.1_ASM207161v1	-	BCW_2634
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.77043	32.7	-	JUXQ01	162	2899	2774	7/10/15	3/4/17	Contig	University of Washington	SAMN03197876	GCA_001065895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/895/GCA_001065895.1_ASM106589v1	26230489	674_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.76294	32.6	-	JUVW01	303	2901	2766	7/10/15	3/4/17	Contig	University of Washington	SAMN03197922	GCA_001066025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/025/GCA_001066025.1_ASM106602v1	26230489	717_SAUR
Salmonella enterica subsp. enterica serovar Westthampton	1967661	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89539	52	-	MXYL01	83	4988	4726	3/22/17	3/25/17	Contig	University of California at Davis	SAMN02368688	GCA_002071635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/071/635/GCA_002071635.1_ASM207163v1	-	BCW_2821
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.37496	50.7	-	NEKP01	340	5799	5340	6/6/17	6/23/17	Contig	FDA/CFSAN	SAMN06759974	GCA_002173285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/285/GCA_002173285.1_ASM217328v1	-	2011C-3665
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37959	65.6	-	MMWY01	21	4267	4089	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916297	GCA_001852005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/005/GCA_001852005.1_ASM185200v1	-	02-R1092
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.31432	39.5	-	CQZK01	85	2545	2272	3/23/15	3/4/17	Scaffold	SC	SAMEA1024732	GCA_001195045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/045/GCA_001195045.1_6730_5_13	-	SMRU661
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.20492	39.5	-	CRMP01	84	2405	2153	3/23/15	3/4/17	Scaffold	SC	SAMEA1025075	GCA_001195125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/125/GCA_001195125.1_6755_3_11	-	SMRU875
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39449	65.6	-	MMWW01	38	4277	4101	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916299	GCA_001852045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/045/GCA_001852045.1_ASM185204v1	-	02-R1593
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.04443	50.6	-	NEKS01	135	5305	4987	6/6/17	6/23/17	Contig	FDA/CFSAN	SAMN06759971	GCA_002173335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/335/GCA_002173335.1_ASM217333v1	-	Jun-37
Salmonella enterica subsp. enterica serovar Bredeny	1967645	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.60834	52.2	-	MXWE01	52	4677	4455	3/22/17	3/25/17	Contig	University of California at Davis	SAMN02368750	GCA_002071655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/071/655/GCA_002071655.1_ASM207165v1	-	BCW_2885
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.84495	32.7	-	JUXU01	322	2947	2818	7/10/15	3/4/17	Contig	University of Washington	SAMN03197872	GCA_001066815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/815/GCA_001066815.1_ASM106681v1	26230489	669_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.81547	32.7	-	JUXO01	158	2941	2812	7/10/15	3/4/17	Contig	University of Washington	SAMN03197878	GCA_001066875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/875/GCA_001066875.1_ASM106687v1	26230489	676_SAUR
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.9909	52.1	-	NACC01	82	5177	4857	4/13/17	4/17/17	Contig	Cornell University	SAMN04394895	GCA_002090375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/375/GCA_002090375.1_ASM209037v1	-	R8_4810_R1
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.01122	50.6	-	NEKK01	71	5145	4897	6/6/17	6/23/17	Contig	FDA/CFSAN	SAMN06759969	GCA_002173345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/345/GCA_002173345.1_ASM217334v1	-	2013-6-173D
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36859	65.6	-	MMWX01	35	4281	4088	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916298	GCA_001852065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/065/GCA_001852065.1_ASM185206v1	-	02-R0861
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.13469	39.6	-	CRHC01	64	2387	2162	3/22/15	3/4/17	Scaffold	SC	SAMEA1025450	GCA_001195145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/145/GCA_001195145.1_6736_7_17	-	SMRU1289
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09409	39.7	-	CRGU01	79	2235	2002	3/23/15	3/4/17	Scaffold	SC	SAMEA1025527	GCA_001195165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/165/GCA_001195165.1_6736_6_22	-	SMRU1270
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3909	65.6	-	MMWT01	33	4290	4103	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916302	GCA_001852085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/085/GCA_001852085.1_ASM185208v1	-	02-R1953
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.88514	50.6	-	NEKQ01	85	5076	4774	6/6/17	6/23/17	Contig	FDA/CFSAN	SAMN06759972	GCA_002173355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/355/GCA_002173355.1_ASM217335v1	-	Jul-98
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.96706	52.1	-	NACE01	63	5148	4835	4/13/17	4/17/17	Contig	Cornell University	SAMN04394868	GCA_002090385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/385/GCA_002090385.1_ASM209038v1	-	R8_3349_R1
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.8117	32.7	-	JUWV01	178	2935	2806	7/10/15	3/4/17	Contig	University of Washington	SAMN03197897	GCA_001066905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/905/GCA_001066905.1_ASM106690v1	26230489	693_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.78617	32.6	-	JUVZ01	171	2927	2803	7/10/15	3/4/17	Contig	University of Washington	SAMN03197919	GCA_001067055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/055/GCA_001067055.1_ASM106705v1	26230489	714_SAUR
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.97569	52.1	-	NACD01	81	5160	4834	4/13/17	4/17/17	Contig	Cornell University	SAMN04394885	GCA_002090395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/395/GCA_002090395.1_ASM209039v1	-	R8_3358_R1
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.04536	50.6	-	NEKR01	120	5285	4978	6/6/17	6/23/17	Contig	FDA/CFSAN	SAMN06759973	GCA_002173365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/173/365/GCA_002173365.1_ASM217336v1	-	Aug-61
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3902	65.6	-	MMWU01	73	4296	4107	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916301	GCA_001852125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/125/GCA_001852125.1_ASM185212v1	-	02-R1636
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.04485	39.5	-	CREZ01	84	2241	2025	3/22/15	3/4/17	Scaffold	SC	SAMEA1024848	GCA_001195225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/225/GCA_001195225.1_6731_6_23	-	SMRU1127
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.16035	39.5	-	CRAE01	79	2379	2155	3/22/15	3/4/17	Scaffold	SC	SAMEA1024535	GCA_001195285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/285/GCA_001195285.1_6730_6_20	-	SMRU692
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39567	65.6	-	MMWR01	23	4288	4107	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916304	GCA_001852145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/145/GCA_001852145.1_ASM185214v1	-	02-R0138
Escherichia coli	562	PRJNA276337	276337	Proteobacteria	Gammaproteobacteria	5.36246	50.2	-	JZAY01	260	5807	5366	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372408	GCA_002175295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/295/GCA_002175295.1_ASM217529v1	-	UMDUCS23
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.96113	52.1	-	NACA01	74	5138	4820	4/13/17	4/17/17	Contig	Cornell University	SAMN04394825	GCA_002090455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/455/GCA_002090455.1_ASM209045v1	-	R8_7956_R1
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.89796	32.6	-	JUMI01	175	3062	2933	7/10/15	3/4/17	Contig	University of Washington	SAMN03198170	GCA_001067705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/705/GCA_001067705.1_ASM106770v1	26230489	950_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.75975	32.8	-	JULK01	134	2846	2692	7/10/15	3/4/17	Contig	University of Washington	SAMN03198194	GCA_001067735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/735/GCA_001067735.1_ASM106773v1	26230489	975_SAUR
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.9802	52.1	-	NACB01	76	5163	4840	4/13/17	4/17/17	Contig	Cornell University	SAMN04394829	GCA_002090465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/465/GCA_002090465.1_ASM209046v1	-	R8_5384_R1
Escherichia coli	562	PRJNA276341	276341	Proteobacteria	Gammaproteobacteria	5.34238	50.3	-	JZAZ01	290	5787	5346	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372412	GCA_002175305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/305/GCA_002175305.1_ASM217530v1	-	UMDUCS27
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3841	65.6	-	MMWQ01	52	4288	4099	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916305	GCA_001852165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/165/GCA_001852165.1_ASM185216v1	-	02-R1454
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10578	39.7	-	CQYH01	59	2254	2014	3/22/15	3/4/17	Scaffold	SC	SAMEA1024746	GCA_001195365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/365/GCA_001195365.1_6730_3_24	-	SMRU624
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11782	39.5	-	CQYD01	54	2346	2116	3/22/15	3/4/17	Scaffold	SC	SAMEA1024536	GCA_001195385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/385/GCA_001195385.1_6730_3_3	-	SMRU603
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39532	65.6	-	MMWK01	46	4306	4118	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916311	GCA_001852275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/275/GCA_001852275.1_ASM185227v1	-	02-R0766
Escherichia coli	562	PRJNA276320	276320	Proteobacteria	Gammaproteobacteria	5.32925	50.3	-	JZAT01	363	5798	5328	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372391	GCA_002175315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/315/GCA_002175315.1_ASM217531v1	-	UMDUCS6
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.97561	52.1	-	NABZ01	76	5147	4835	4/13/17	4/17/17	Contig	Cornell University	SAMN04394835	GCA_002090475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/475/GCA_002090475.1_ASM209047v1	-	R9_3253_R1
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.79727	32.6	-	JUNM01	168	2920	2786	7/10/15	3/4/17	Contig	University of Washington	SAMN03198140	GCA_001068125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/125/GCA_001068125.1_ASM106812v1	26230489	922_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.85328	32.6	-	JUMW01	176	2992	2860	7/10/15	3/4/17	Contig	University of Washington	SAMN03198156	GCA_001068155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/155/GCA_001068155.1_ASM106815v1	26230489	937_SAUR
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.91769	52.1	-	NABW01	91	5079	4759	4/13/17	4/17/17	Contig	Cornell University	SAMN04394871	GCA_002090485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/485/GCA_002090485.1_ASM209048v1	-	R9_3257_R1
Escherichia coli	562	PRJNA276322	276322	Proteobacteria	Gammaproteobacteria	5.39864	50.3	-	JZAU01	291	5877	5418	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372393	GCA_002175325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/325/GCA_002175325.1_ASM217532v1	-	UMDUCS8
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34888	65.6	-	MMWI01	22	4251	4080	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916313	GCA_001852375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/375/GCA_001852375.1_ASM185237v1	-	03-R1625
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08629	39.5	-	CRJJ01	76	2319	2062	3/23/15	3/4/17	Scaffold	SC	SAMEA1025132	GCA_001195405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/405/GCA_001195405.1_6753_2_2	-	SMRU1490
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.98943	39.7	-	CRYC01	44	2202	1988	3/23/15	3/4/17	Scaffold	SC	SAMEA970248	GCA_001195425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/425/GCA_001195425.1_5242_7_10	-	BHN587
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37882	65.6	-	MMVW01	10	4257	4087	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916325	GCA_001852525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/525/GCA_001852525.1_ASM185252v1	-	02-R0244
Escherichia coli	562	PRJNA276343	276343	Proteobacteria	Gammaproteobacteria	5.38746	50.3	-	JZBA01	270	5848	5403	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372414	GCA_002175375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/375/GCA_002175375.1_ASM217537v1	-	UMDUCS29
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.89904	52.2	-	NABT01	87	5029	4803	4/13/17	4/17/17	Contig	Cornell University	SAMN04394901	GCA_002090535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/535/GCA_002090535.1_ASM209053v1	-	R8_1598_R1
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.87789	32.7	-	JUME01	141	2998	2861	7/10/15	3/4/17	Contig	University of Washington	SAMN03198174	GCA_001068235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/235/GCA_001068235.1_ASM106823v1	26230489	954_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.89646	32.6	-	JUMD01	168	3058	2932	7/10/15	3/4/17	Contig	University of Washington	SAMN03198175	GCA_001068255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/255/GCA_001068255.1_ASM106825v1	26230489	955_SAUR
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.96856	52.1	-	NABU01	90	5144	4907	4/13/17	4/17/17	Contig	Cornell University	SAMN04394888	GCA_002090545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/545/GCA_002090545.1_ASM209054v1	-	R8_0802_R1
Escherichia coli	562	PRJNA276344	276344	Proteobacteria	Gammaproteobacteria	5.3619	50.3	-	JZBB01	289	5834	5388	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372415	GCA_002175385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/385/GCA_002175385.1_ASM217538v1	-	UMDUCS30
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.4072	65.6	-	MMVV01	2	4284	4131	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916326	GCA_001852555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/555/GCA_001852555.1_ASM185255v1	-	02-R1698
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12132	39.7	-	CRWI01	78	2341	2126	3/23/15	3/11/17	Scaffold	SC	SAMEA1025544	GCA_001195505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/505/GCA_001195505.1_6807_1_19	-	SMRU1579
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12792	39.7	-	CRQY01	115	2360	2147	3/23/15	3/10/17	Scaffold	SC	SAMEA1024763	GCA_001195525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/525/GCA_001195525.1_6791_6_4	-	SMRU628
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39349	65.6	-	MMVR01	24	4268	4097	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916330	GCA_001852635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/635/GCA_001852635.1_ASM185263v1	-	02-R1676
Escherichia coli	562	PRJNA276349	276349	Proteobacteria	Gammaproteobacteria	5.37209	50.4	-	JZBF01	379	5840	5401	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372420	GCA_002175395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/395/GCA_002175395.1_ASM217539v1	-	UMDUCS35
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.9507	52.2	-	NABS01	109	5101	4874	4/13/17	4/17/17	Contig	Cornell University	SAMN04394762	GCA_002090555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/555/GCA_002090555.1_ASM209055v1	-	R8_2926_R1
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.74218	32.7	-	JULJ01	135	2844	2700	7/10/15	3/4/17	Contig	University of Washington	SAMN03198195	GCA_001068315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/315/GCA_001068315.1_ASM106831v1	26230489	976_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.78822	32.7	-	JVTU01	68	2851	2712	7/10/15	3/4/17	Contig	University of Washington	SAMN03197299	GCA_001076165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/165/GCA_001076165.1_ASM107616v1	26230489	1321_SAUR
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.97517	52.1	-	NABV01	65	5148	4835	4/13/17	4/17/17	Contig	Cornell University	SAMN04394887	GCA_002090565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/565/GCA_002090565.1_ASM209056v1	-	R9_3258_R1
Escherichia coli	562	PRJNA276355	276355	Proteobacteria	Gammaproteobacteria	5.44268	50.2	-	JZBI01	336	5931	5468	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372426	GCA_002175405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/405/GCA_002175405.1_ASM217540v1	-	UMDUCS41
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38521	65.6	-	MMVJ01	74	4291	4094	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916338	GCA_001852795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/795/GCA_001852795.1_ASM185279v1	-	02-R1933
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.16693	39.6	-	CRNB01	88	2410	2169	3/22/15	3/11/17	Scaffold	SC	SAMEA1024550	GCA_001195545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/545/GCA_001195545.1_6755_3_3	-	SMRU867
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14557	39.6	-	CRCM01	91	2371	2134	3/23/15	3/11/17	Scaffold	SC	SAMEA1024823	GCA_001195565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/565/GCA_001195565.1_6731_3_1	-	SMRU1033
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37995	65.6	-	MMVK01	68	4291	4095	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916337	GCA_001852815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/815/GCA_001852815.1_ASM185281v1	-	02-R1943
Escherichia coli	562	PRJNA276363	276363	Proteobacteria	Gammaproteobacteria	5.35696	50.3	-	JZBK01	258	5809	5350	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372434	GCA_002175455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/455/GCA_002175455.1_ASM217545v1	-	UMDUCS49
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.89058	52.2	-	NABR01	87	5033	4805	4/13/17	4/17/17	Contig	Cornell University	SAMN04394816	GCA_002090615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/615/GCA_002090615.1_ASM209061v1	-	R8_2947_R1
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.90978	32.7	-	CPJW01	17	3091	2929	3/23/15	3/4/17	Contig	SC	SAMEA1569610	GCA_001086885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/885/GCA_001086885.1_8489_7_61	-	E4278
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.90412	32.7	-	CPJQ01	20	3060	2926	3/23/15	3/4/17	Contig	SC	SAMEA1569574	GCA_001091885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/885/GCA_001091885.1_8489_7_50	-	E4278
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	5.00066	52.1	-	NABP01	86	5178	4937	4/13/17	4/17/17	Contig	Cornell University	SAMN04394905	GCA_002090625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/625/GCA_002090625.1_ASM209062v1	-	R8_4995_R1
Escherichia coli	562	PRJNA276372	276372	Proteobacteria	Gammaproteobacteria	5.34314	50.3	-	JZBM01	336	5817	5342	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372441	GCA_002175465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/465/GCA_002175465.1_ASM217546v1	-	UMDUCS56
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.4033	65.6	-	MMVF01	50	4316	4118	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916342	GCA_001852865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/865/GCA_001852865.1_ASM185286v1	-	97-14075
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.94785	39.8	-	CRXZ01	38	2147	1935	3/22/15	3/11/17	Scaffold	SC	SAMEA970294	GCA_001195705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/705/GCA_001195705.1_5242_8_8	-	BHN597
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.09075	39.7	-	CRDU01	71	2320	2089	3/23/15	3/11/17	Scaffold	SC	SAMEA1024791	GCA_001195785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/785/GCA_001195785.1_6731_4_4	-	SMRU1060
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40489	65.6	-	MMVG01	52	4306	4116	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916341	GCA_001852885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/885/GCA_001852885.1_ASM185288v1	-	97-20962
Escherichia coli	562	PRJNA276383	276383	Proteobacteria	Gammaproteobacteria	5.35241	50.3	-	JZBN01	280	5799	5340	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372452	GCA_002175475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/475/GCA_002175475.1_ASM217547v1	-	UMDUCS67
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.83937	52.2	-	NABQ01	79	4964	4733	4/13/17	4/17/17	Contig	Cornell University	SAMN04394873	GCA_002090655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/655/GCA_002090655.1_ASM209065v1	-	R8_4908_R1
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.95228	32.7	-	CPJV01	25	3151	2994	3/23/15	3/4/17	Contig	SC	SAMEA1569627	GCA_001113025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/025/GCA_001113025.1_8489_7_41	-	E2125
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.90627	32.7	-	CPJO01	21	3091	2928	3/22/15	3/4/17	Contig	SC	SAMEA1569604	GCA_001113685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/685/GCA_001113685.1_8489_7_58	-	E4278
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.95102	52.2	-	NABO01	111	5109	4863	4/13/17	4/17/17	Contig	Cornell University	SAMN04394924	GCA_002090665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/665/GCA_002090665.1_ASM209066v1	-	R8_4997_R1
Escherichia coli	562	PRJNA276387	276387	Proteobacteria	Gammaproteobacteria	5.32999	50.3	-	JZBO01	281	5791	5343	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372456	GCA_002175485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/485/GCA_002175485.1_ASM217548v1	-	UMDUCS71
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40033	65.6	-	MMVC01	32	4301	4115	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916345	GCA_001852955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/955/GCA_001852955.1_ASM185295v1	-	98-R454
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09644	39.5	-	CRWV01	59	2302	2058	3/23/15	3/10/17	Scaffold	SC	SAMEA1025457	GCA_001195825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/825/GCA_001195825.1_6807_2_17	-	SMRU1601
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.11685	39.5	-	CRUI01	41	2346	2100	3/23/15	3/11/17	Scaffold	SC	SAMEA1025476	GCA_001195865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/865/GCA_001195865.1_6805_5_3	-	SMRU1683
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39431	65.6	-	MMVB01	43	4291	4092	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916346	GCA_001852985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/852/985/GCA_001852985.1_ASM185298v1	-	99-R896
Escherichia coli	562	PRJNA276319	276319	Proteobacteria	Gammaproteobacteria	5.34865	50.3	-	JZAS01	326	5791	5349	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372390	GCA_002175535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/535/GCA_002175535.1_ASM217553v1	-	UMDUCS5
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.86001	52.2	-	NABM01	91	4989	4764	4/13/17	4/17/17	Contig	Cornell University	SAMN04394828	GCA_002090695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/695/GCA_002090695.1_ASM209069v1	-	R9_3259_R1
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.90619	32.7	-	CPJY01	16	3088	2930	3/23/15	3/4/17	Contig	SC	SAMEA1569592	GCA_001120725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/725/GCA_001120725.1_8489_7_59	-	E4278
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.905	32.7	-	CPJS01	22	3092	2924	3/22/15	3/4/17	Contig	SC	SAMEA1569599	GCA_001120905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/905/GCA_001120905.1_8489_7_49	-	E4278
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.93811	52.2	-	NABL01	95	5092	4853	4/13/17	4/17/17	Contig	Cornell University	SAMN04394823	GCA_002090705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/705/GCA_002090705.1_ASM209070v1	-	R9_3260_R1
Escherichia coli	562	PRJNA276329	276329	Proteobacteria	Gammaproteobacteria	5.29044	50.3	-	JZAW01	322	5765	5303	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372400	GCA_002175545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/545/GCA_002175545.1_ASM217554v1	-	UMDUCS15
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40054	65.6	-	MMUW01	30	4282	4115	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916351	GCA_001853085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/085/GCA_001853085.1_ASM185308v1	-	98-R782
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14495	39.7	-	CQXK01	63	2335	2074	3/23/15	3/11/17	Scaffold	SC	SAMEA1024766	GCA_001196065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/065/GCA_001196065.1_6730_1_12	-	SMRU588
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.95353	39.7	-	CRXU01	46	2164	1952	3/23/15	3/11/17	Scaffold	SC	SAMEA970219	GCA_001196205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/205/GCA_001196205.1_5242_6_4	-	BHN571
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39111	65.6	-	MMUV01	32	4281	4111	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916352	GCA_001853105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/105/GCA_001853105.1_ASM185310v1	-	98-R570
Escherichia coli	562	PRJNA276326	276326	Proteobacteria	Gammaproteobacteria	5.34092	50.3	-	JZAV01	304	5788	5348	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372397	GCA_002175555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/555/GCA_002175555.1_ASM217555v1	-	UMDUCS12
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.97282	52.1	-	NABY01	72	5149	4821	4/13/17	4/17/17	Contig	Cornell University	SAMN04394921	GCA_002090735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/735/GCA_002090735.1_ASM209073v1	-	R9_3255_R1
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.9533	32.7	-	CPJM01	27	3155	2990	3/23/15	3/4/17	Contig	SC	SAMEA1569591	GCA_001126325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/325/GCA_001126325.1_8489_7_38	-	E2125
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.9046	32.7	-	CPJL01	18	3084	2924	3/23/15	3/4/17	Contig	SC	SAMEA1569589	GCA_001130185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/185/GCA_001130185.1_8489_7_57	-	E4278
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.97751	52.1	-	NACF01	65	5157	4838	4/13/17	4/17/17	Contig	Cornell University	SAMN04394918	GCA_002090755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/755/GCA_002090755.1_ASM209075v1	-	R8_1599_R1
Escherichia coli	562	PRJNA276335	276335	Proteobacteria	Gammaproteobacteria	5.36683	50.3	-	JZAX01	304	5815	5362	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372406	GCA_002175575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/575/GCA_002175575.1_ASM217557v1	-	UMDUCS21
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40123	65.6	-	MMUT01	42	4306	4097	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916354	GCA_001853125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/125/GCA_001853125.1_ASM185312v1	-	98-19063
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11883	39.5	-	CQYF01	79	2265	2020	3/22/15	3/11/17	Scaffold	SC	SAMEA1024549	GCA_001196255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/255/GCA_001196255.1_6730_3_2	-	SMRU602
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.14844	39.6	-	CRUJ01	78	2373	2152	3/23/15	3/10/17	Scaffold	SC	SAMEA1025310	GCA_001196355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/355/GCA_001196355.1_6805_6_10	-	SMRU1714
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40302	65.6	-	MMUU01	35	4304	4119	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916353	GCA_001853135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/135/GCA_001853135.1_ASM185313v1	-	98-R841
Escherichia coli	562	PRJNA276347	276347	Proteobacteria	Gammaproteobacteria	5.39922	50.3	-	JZBD01	276	5867	5414	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372418	GCA_002175615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/615/GCA_002175615.1_ASM217561v1	-	UMDUCS33
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.94883	52.2	-	NABN01	108	5108	4871	4/13/17	4/17/17	Contig	Cornell University	SAMN04394756	GCA_002090765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/765/GCA_002090765.1_ASM209076v1	-	R8_8684_R1
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.90506	32.7	-	CPJZ01	20	3090	2929	3/22/15	3/4/17	Contig	SC	SAMEA1569586	GCA_001133445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/445/GCA_001133445.1_8489_7_48	-	E4278
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.95146	32.7	-	CPKD01	27	3148	2990	3/23/15	3/4/17	Contig	SC	SAMEA1569613	GCA_001138445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/445/GCA_001138445.1_8489_7_40	-	E2125
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.95718	52.1	-	NABX01	83	5131	4811	4/13/17	4/17/17	Contig	Cornell University	SAMN04394892	GCA_002090775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/775/GCA_002090775.1_ASM209077v1	-	R9_3256_R1
Escherichia coli	562	PRJNA276345	276345	Proteobacteria	Gammaproteobacteria	5.40975	50.2	-	JZBC01	273	5877	5419	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372416	GCA_002175625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/625/GCA_002175625.1_ASM217562v1	-	UMDUCS31
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37771	65.6	-	MMUS01	43	4272	4080	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916355	GCA_001853165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/165/GCA_001853165.1_ASM185316v1	-	99-R076
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.06742	39.6	-	CRCV01	102	2240	2001	3/23/15	3/9/17	Scaffold	SC	SAMEA1024938	GCA_001196495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/495/GCA_001196495.1_6731_3_17	-	SMRU1049
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.24767	39.7	-	CRPC01	47	2454	2228	3/22/15	3/4/17	Scaffold	SC	SAMEA1025471	GCA_001196535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/535/GCA_001196535.1_6755_6_5	-	SMRU1181
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39282	65.6	-	MMUR01	34	4279	4106	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916356	GCA_001853185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/185/GCA_001853185.1_ASM185318v1	-	98-R751
Escherichia coli	562	PRJNA276348	276348	Proteobacteria	Gammaproteobacteria	5.3408	50.3	-	JZBE01	346	5801	5342	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372419	GCA_002175645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/645/GCA_002175645.1_ASM217564v1	-	UMDUCS34
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.92954	52.2	-	NABK01	80	5072	4841	4/13/17	4/17/17	Contig	Cornell University	SAMN04394906	GCA_002090815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/815/GCA_002090815.1_ASM209081v1	-	R9_3254_R1
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.9509	32.7	-	CPJT01	26	3145	2988	3/23/15	3/4/17	Contig	SC	SAMEA1569594	GCA_001141805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/805/GCA_001141805.1_8489_7_36	-	E2125
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.95044	32.7	-	CPJX01	23	3145	2988	3/23/15	3/4/17	Contig	SC	SAMEA1569600	GCA_001143805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/805/GCA_001143805.1_8489_7_39	-	E2125
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.96226	52.1	-	NABF01	86	5135	4908	4/13/17	4/17/17	Contig	Cornell University	SAMN04394864	GCA_002090835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/835/GCA_002090835.1_ASM209083v1	-	R9_3266_R1
Escherichia coli	562	PRJNA276350	276350	Proteobacteria	Gammaproteobacteria	5.38734	50.3	-	JZBG01	276	5824	5389	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372421	GCA_002175655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/655/GCA_002175655.1_ASM217565v1	-	UMDUCS36
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38134	65.6	-	MMUQ01	50	4283	4104	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916357	GCA_001853195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/195/GCA_001853195.1_ASM185319v1	-	98-R790
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99031	39.7	-	CRYG01	45	2207	1996	3/22/15	3/4/17	Scaffold	SC	SAMEA970235	GCA_001196695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/695/GCA_001196695.1_5242_7_8	-	BHN585
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.11157	39.6	-	CRJL01	53	2326	2071	3/22/15	3/4/17	Scaffold	SC	SAMEA1025198	GCA_001196735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/735/GCA_001196735.1_6753_2_19	-	SMRU1508
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38185	65.6	-	MMUP01	19	4248	4091	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05916358	GCA_001853205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/853/205/GCA_001853205.1_ASM185320v1	-	99-R537
Escherichia coli	562	PRJNA276354	276354	Proteobacteria	Gammaproteobacteria	5.35931	50.2	-	JZBH01	355	5848	5379	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372425	GCA_002175695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/695/GCA_002175695.1_ASM217569v1	-	UMDUCS40
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.9789	52.1	-	NABI01	94	5164	4911	4/13/17	4/17/17	Contig	Cornell University	SAMN04394810	GCA_002090845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/845/GCA_002090845.1_ASM209084v1	-	R9_3263_R1
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.90496	32.7	-	CPJU01	20	3090	2927	3/23/15	3/4/17	Contig	SC	SAMEA1569620	GCA_001148525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/525/GCA_001148525.1_8489_7_56	-	E4278
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.90418	32.7	-	CPJN01	15	3089	2929	3/23/15	3/4/17	Contig	SC	SAMEA1569611	GCA_001150145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/145/GCA_001150145.1_8489_7_55	-	E4278
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.97204	52.1	-	NABH01	95	5148	4913	4/13/17	4/17/17	Contig	Cornell University	SAMN04394792	GCA_002090865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/865/GCA_002090865.1_ASM209086v1	-	R9_3264_R1
Escherichia coli	562	PRJNA276371	276371	Proteobacteria	Gammaproteobacteria	5.34595	50.3	-	JZBL01	343	5823	5355	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372440	GCA_002175705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/705/GCA_002175705.1_ASM217570v1	-	UMDUCS55
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40515	65.6	-	MMLI01	25	4291	4109	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918550	GCA_001855795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/795/GCA_001855795.1_ASM185579v1	-	01-R0244
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.1086	39.5	-	CRMK01	66	2343	2103	3/23/15	3/4/17	Scaffold	SC	SAMEA1025094	GCA_001196755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/755/GCA_001196755.1_6755_2_4	-	SMRU796
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08358	39.4	-	CROA01	57	2335	2086	3/23/15	3/10/17	Scaffold	SC	SAMEA1025199	GCA_001197055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/055/GCA_001197055.1_6755_5_12	-	SMRU1164
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40626	65.6	-	MMLQ01	10	4283	4126	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918542	GCA_001855805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/805/GCA_001855805.1_ASM185580v1	-	00-R0023
Escherichia coli	562	PRJNA276359	276359	Proteobacteria	Gammaproteobacteria	5.36188	50.3	-	JZBJ01	261	5817	5351	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372430	GCA_002175715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/715/GCA_002175715.1_ASM217571v1	-	UMDUCS45
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.89419	52.2	-	NABE01	101	5031	4807	4/13/17	4/17/17	Contig	Cornell University	SAMN04394775	GCA_002090875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/875/GCA_002090875.1_ASM209087v1	-	R9_3267_R1
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.90876	32.7	-	CPJP01	19	3060	2929	3/22/15	3/4/17	Contig	SC	SAMEA1569637	GCA_001150365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/365/GCA_001150365.1_8489_7_52	-	E4278
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.90816	32.7	-	CPJR01	19	3065	2930	3/23/15	3/4/17	Contig	SC	SAMEA1569580	GCA_001151145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/145/GCA_001151145.1_8489_7_51	-	E4278
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.89636	52.2	-	NABD01	83	5041	4807	4/13/17	4/17/17	Contig	Cornell University	SAMN04394878	GCA_002090915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/915/GCA_002090915.1_ASM209091v1	-	R9_3268_R1
Escherichia coli	562	PRJNA276388	276388	Proteobacteria	Gammaproteobacteria	5.35263	50.3	-	JZBP01	299	5820	5363	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372457	GCA_002175725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/725/GCA_002175725.1_ASM217572v1	-	UMDUCS72
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40871	65.6	-	MMME01	6	4286	4116	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918528	GCA_001855865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/865/GCA_001855865.1_ASM185586v1	-	I0000968-3
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.22376	39.6	-	CROG01	63	2451	2218	3/22/15	3/11/17	Scaffold	SC	SAMEA1025578	GCA_001197075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/075/GCA_001197075.1_6755_5_21	-	SMRU1173
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.09249	39.5	-	CQWS01	130	2284	2078	3/23/15	3/11/17	Scaffold	SC	SAMEA1024790	GCA_001197135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/135/GCA_001197135.1_6714_7_8	-	SMRU752
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3448	65.6	-	MMMD01	32	4259	4074	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918529	GCA_001855905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/905/GCA_001855905.1_ASM185590v1	-	I0000888-3
Escherichia coli	562	PRJNA276323	276323	Proteobacteria	Gammaproteobacteria	5.39758	50.3	-	JZFH01	339	5868	5393	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372394	GCA_002175775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/775/GCA_002175775.1_ASM217577v1	-	UMDUCS9
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	5.1049	52	-	NABC01	103	5303	5030	4/13/17	4/17/17	Contig	Cornell University	SAMN04394922	GCA_002090935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/935/GCA_002090935.1_ASM209093v1	-	R8_0763_R1
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.91162	32.7	-	CPKA01	21	3094	2931	3/22/15	3/4/17	Contig	SC	SAMEA1569622	GCA_001164545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/545/GCA_001164545.1_8489_7_60	-	E4278
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.95316	32.7	-	CPKB01	23	3151	2992	3/23/15	3/4/17	Contig	SC	SAMEA1569628	GCA_001167985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/985/GCA_001167985.1_8489_7_43	-	E2125
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	5.04684	52.1	-	NAAZ01	112	5209	4950	4/13/17	4/17/17	Contig	Cornell University	SAMN04394911	GCA_002090945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/945/GCA_002090945.1_ASM209094v1	-	R8_5213_R1
Escherichia coli	562	PRJNA276317	276317	Proteobacteria	Gammaproteobacteria	5.41817	50.3	-	JZFD01	292	5909	5424	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372387	GCA_002175785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/785/GCA_002175785.1_ASM217578v1	-	UMDUCS2
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40407	65.6	-	MMML01	35	4297	4108	10/25/16	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN05918521	GCA_001855975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/975/GCA_001855975.1_ASM185597v1	-	I0005431-7
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.18614	39.5	-	CQVA01	55	2417	2147	3/22/15	3/11/17	Scaffold	SC	SAMEA1025345	GCA_001197155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/155/GCA_001197155.1_6710_7_15	-	SMRU1383
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.15103	39.5	-	CRAI01	76	2392	2163	3/23/15	3/11/17	Scaffold	SC	SAMEA1024712	GCA_001197195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/195/GCA_001197195.1_6730_6_7	-	SMRU679
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39924	65.6	-	MQAI01	23	4294	4092	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010119	GCA_001942635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/635/GCA_001942635.1_ASM194263v1	-	I0005643-7
Escherichia coli	562	PRJNA276328	276328	Proteobacteria	Gammaproteobacteria	5.30295	50.3	-	JZFL01	381	5738	5280	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372399	GCA_002175795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/795/GCA_002175795.1_ASM217579v1	-	UMDUCS14
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.95153	52.1	-	NABB01	102	5103	4881	4/13/17	4/17/17	Contig	Cornell University	SAMN04394747	GCA_002090955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/955/GCA_002090955.1_ASM209095v1	-	R8_0764_R1
Staphylococcus aureus	1280	PRJNA273903	273903	Terrabacteria group	Firmicutes	2.76938	32.7	-	LFED02	79	2903	2772	7/21/15	3/6/17	Contig	KNIH	SAMN03301670	GCA_001184285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/285/GCA_001184285.2_ASM118428v2	27313284	V808
Staphylococcus aureus	1280	PRJNA273900	273900	Terrabacteria group	Firmicutes	2.60283	32.7	-	LFEB02	90	2746	2580	7/21/15	3/6/17	Contig	KNIH	SAMN03301666	GCA_001184325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/325/GCA_001184325.2_ASM118432v2	27313284	V1142
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	5.08481	52	-	NAAY01	124	5268	5004	4/13/17	4/17/17	Contig	Cornell University	SAMN04394838	GCA_002090995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/090/995/GCA_002090995.1_ASM209099v1	-	R8_6089_R1
Escherichia coli	562	PRJNA276324	276324	Proteobacteria	Gammaproteobacteria	5.38472	50.3	-	JZFI01	270	5838	5362	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372395	GCA_002175805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/805/GCA_002175805.1_ASM217580v1	-	UMDUCS10
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39813	65.6	-	MQAK01	20	4269	4113	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010121	GCA_001942655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/655/GCA_001942655.1_ASM194265v1	-	I0002978-0
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.95287	39.7	-	CRXV01	47	2149	1951	3/23/15	3/4/17	Scaffold	SC	SAMEA970281	GCA_001197215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/215/GCA_001197215.1_5242_6_9	-	BHN575
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.05594	39.7	-	CRMM01	63	2263	2056	3/23/15	3/4/17	Scaffold	SC	SAMEA1025010	GCA_001197255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/255/GCA_001197255.1_6755_2_9	-	SMRU801
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38913	65.6	-	MQAN01	9	4283	4089	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010125	GCA_001942705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/705/GCA_001942705.1_ASM194270v1	-	I0003813-8
Escherichia coli	562	PRJNA276338	276338	Proteobacteria	Gammaproteobacteria	5.37286	50.3	-	JZFS01	272	5836	5371	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372409	GCA_002175855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/855/GCA_002175855.1_ASM217585v1	-	UMDUCS24
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	5.0781	51.9	-	NAAV01	119	5208	4948	4/13/17	4/17/17	Contig	Cornell University	SAMN04394787	GCA_002091015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/015/GCA_002091015.1_ASM209101v1	-	R8_8132_R1
Staphylococcus aureus	1280	PRJNA273904	273904	Terrabacteria group	Firmicutes	2.7271	32.7	-	LFEC02	33	2843	2684	7/21/15	3/6/17	Contig	KNIH	SAMN03301671	GCA_001184335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/335/GCA_001184335.2_ASM118433v2	27313284	V040
Staphylococcus aureus	1280	PRJNA273902	273902	Terrabacteria group	Firmicutes	2.86338	32.8	-	LFEA02	49	2983	2834	7/21/15	3/6/17	Contig	KNIH	SAMN03301669	GCA_001184345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/184/345/GCA_001184345.2_ASM118434v2	27313284	V1127
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.99603	52.2	-	NAAX01	118	5148	4902	4/13/17	4/17/17	Contig	Cornell University	SAMN04394822	GCA_002091025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/025/GCA_002091025.1_ASM209102v1	-	R8_8073_R1
Escherichia coli	562	PRJNA276332	276332	Proteobacteria	Gammaproteobacteria	5.45955	50.3	-	JZFO01	286	5955	5484	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372403	GCA_002175865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/865/GCA_002175865.1_ASM217586v1	-	UMDUCS18
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37902	65.6	-	MQAQ01	18	4263	4093	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010128	GCA_001942725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/725/GCA_001942725.1_ASM194272v1	-	I0004037-3
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12939	39.6	-	CRNR01	60	2303	2088	3/23/15	3/4/17	Scaffold	SC	SAMEA1025032	GCA_001197275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/275/GCA_001197275.1_6755_4_6	-	SMRU1134
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.15885	39.5	-	CRXG01	42	2394	2158	3/22/15	3/4/17	Scaffold	SC	SAMEA1025562	GCA_001197395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/395/GCA_001197395.1_6807_2_19	-	SMRU1603
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37642	65.6	-	MQBF01	12	4259	4097	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010144	GCA_001942905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/942/905/GCA_001942905.1_ASM194290v1	-	I0004445-8
Escherichia coli	562	PRJNA276331	276331	Proteobacteria	Gammaproteobacteria	5.39158	50.3	-	JZFN01	277	5852	5384	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372402	GCA_002175875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/875/GCA_002175875.1_ASM217587v1	-	UMDUCS17
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	5.02494	52.1	-	NAAP01	132	5213	4947	4/13/17	4/17/17	Contig	Cornell University	SAMN04394870	GCA_002091045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/045/GCA_002091045.1_ASM209104v1	-	R9_3272_R1
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.80124	32.7	-	CSDP01	58	2933	2775	3/23/15	3/5/17	Contig	SC	SAMEA1324745	GCA_001191695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/695/GCA_001191695.1_7748_4_47	-	USFL046
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.81678	32.7	-	CSMI01	49	2902	2769	3/22/15	3/4/17	Contig	SC	SAMEA1463466	GCA_001191855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/855/GCA_001191855.1_7907_7_56	-	BSAR159_2
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	5.18275	51.8	-	NAAR01	136	5353	5097	4/13/17	4/17/17	Contig	Cornell University	SAMN04394898	GCA_002091075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/075/GCA_002091075.1_ASM209107v1	-	R9_3270_R1
Escherichia coli	562	PRJNA276336	276336	Proteobacteria	Gammaproteobacteria	5.36972	50.3	-	JZFR01	261	5832	5367	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372407	GCA_002175885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/885/GCA_002175885.1_ASM217588v1	-	UMDUCS22
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38381	65.6	-	MQBN01	28	4282	4113	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010152	GCA_001943035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/035/GCA_001943035.1_ASM194303v1	-	I0003447-5
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.1184	39.4	-	CRJY01	60	2306	2072	3/23/15	3/4/17	Scaffold	SC	SAMEA1025608	GCA_001197415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/415/GCA_001197415.1_6753_3_16	-	SMRU1528
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.16717	39.5	-	CQWA01	86	2417	2178	3/23/15	3/4/17	Scaffold	SC	SAMEA1025164	GCA_001197535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/535/GCA_001197535.1_6710_8_2	-	SMRU1394
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3819	65.6	-	MQBM01	15	4251	4092	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010151	GCA_001943045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/045/GCA_001943045.1_ASM194304v1	-	I0003398-0
Escherichia coli	562	PRJNA276342	276342	Proteobacteria	Gammaproteobacteria	5.51521	50.3	-	JZFV01	276	6043	5558	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372413	GCA_002175935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/935/GCA_002175935.1_ASM217593v1	-	UMDUCS28
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	5.01381	52.1	-	NAAM01	96	5156	4911	4/13/17	4/17/17	Contig	Cornell University	SAMN04394917	GCA_002091115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/115/GCA_002091115.1_ASM209111v1	-	R9_3275_R1
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.80287	32.7	-	CSJT01	29	2930	2815	3/22/15	3/4/17	Contig	SC	SAMEA1324606	GCA_001192035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/035/GCA_001192035.1_7738_3_66	-	USFL253
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.77608	32.7	-	CSMM01	36	2842	2693	3/22/15	3/4/17	Contig	SC	SAMEA1463413	GCA_001192175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/175/GCA_001192175.1_7907_7_85	-	BSAR191_2
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.93682	52.1	-	NAAL01	93	5062	4830	4/13/17	4/17/17	Contig	Cornell University	SAMN04394774	GCA_002091125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/125/GCA_002091125.1_ASM209112v1	-	R9_3276_R1
Escherichia coli	562	PRJNA276356	276356	Proteobacteria	Gammaproteobacteria	5.63962	50.2	-	JZGA01	422	6233	5709	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372427	GCA_002175945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/945/GCA_002175945.1_ASM217594v1	-	UMDUCS42
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36658	65.6	-	MQBT01	15	4265	4091	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010158	GCA_001943115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/115/GCA_001943115.1_ASM194311v1	-	I0000443-7
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12257	39.5	-	CQZT01	55	2368	2140	3/23/15	3/4/17	Scaffold	SC	SAMEA1024851	GCA_001197575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/575/GCA_001197575.1_6730_5_8	-	SMRU656
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.11356	39.5	-	CRGY01	48	2332	2122	3/22/15	3/4/17	Scaffold	SC	SAMEA1025237	GCA_001197635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/635/GCA_001197635.1_6736_6_8	-	SMRU1256
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38758	65.6	-	MQBZ01	9	4261	4092	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010164	GCA_001943205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/205/GCA_001943205.1_ASM194320v1	-	I0004125-6
Escherichia coli	562	PRJNA276357	276357	Proteobacteria	Gammaproteobacteria	5.36703	50.3	-	JZGB01	303	5836	5339	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372428	GCA_002175955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/955/GCA_002175955.1_ASM217595v1	-	UMDUCS43
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.85441	52.2	-	NABJ01	89	4985	4755	4/13/17	4/17/17	Contig	Cornell University	SAMN04394754	GCA_002091155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/155/GCA_002091155.1_ASM209115v1	-	R9_3261_R1
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88039	32.6	-	CSGX01	42	3024	2893	3/22/15	3/4/17	Contig	SC	SAMEA1324593	GCA_001192235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/235/GCA_001192235.1_7748_4_34	-	USFL033
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.89568	32.7	-	CSGJ01	35	3068	2940	3/23/15	3/4/17	Contig	SC	SAMEA1466467	GCA_001192495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/495/GCA_001192495.1_7907_4_58	-	USFL151
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.97411	52.2	-	NABG01	105	5145	4905	4/13/17	4/17/17	Contig	Cornell University	SAMN04394886	GCA_002091175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/175/GCA_002091175.1_ASM209117v1	-	R9_3265_R1
Escherichia coli	562	PRJNA276351	276351	Proteobacteria	Gammaproteobacteria	5.35654	50.3	-	JZFX01	264	5812	5346	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372422	GCA_002175965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/175/965/GCA_002175965.1_ASM217596v1	-	UMDUCS37
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39868	65.6	-	MQCC01	5	4263	4109	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010167	GCA_001943225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/225/GCA_001943225.1_ASM194322v1	-	I0003232-1
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07893	39.6	-	CRWE01	60	2281	2072	3/23/15	3/4/17	Scaffold	SC	SAMEA1025497	GCA_001197755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/755/GCA_001197755.1_6807_1_17	-	SMRU1577
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.15651	39.5	-	CQYE01	61	2386	2157	3/23/15	3/10/17	Scaffold	SC	SAMEA1024944	GCA_001197835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/835/GCA_001197835.1_6730_3_20	-	SMRU620
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39159	65.6	-	MQCJ01	10	4266	4098	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010175	GCA_001943345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/345/GCA_001943345.1_ASM194334v1	-	I0001195-2
Escherichia coli	562	PRJNA276358	276358	Proteobacteria	Gammaproteobacteria	5.39738	50.3	-	JZGC01	265	5863	5390	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372429	GCA_002176015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/015/GCA_002176015.1_ASM217601v1	-	UMDUCS44
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.87074	52.1	-	NAAK01	119	4986	4774	4/13/17	4/17/17	Contig	Cornell University	SAMN04394819	GCA_002091185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/185/GCA_002091185.1_ASM209118v1	-	R9_3277_R1
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87819	32.6	-	CSGW01	33	3029	2900	3/23/15	3/4/17	Contig	SC	SAMEA1324536	GCA_001192715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/715/GCA_001192715.1_7738_4_34	-	USFL315
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.93075	32.6	-	CSFR01	58	3101	2964	3/23/15	3/4/17	Contig	SC	SAMEA1324610	GCA_001192755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/755/GCA_001192755.1_7748_4_15	-	USFL015
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.97949	52.1	-	NABA01	89	5080	4856	4/13/17	4/17/17	Contig	Cornell University	SAMN04394773	GCA_002091215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/215/GCA_002091215.1_ASM209121v1	-	R8_0784_R1
Escherichia coli	562	PRJNA276374	276374	Proteobacteria	Gammaproteobacteria	5.38463	50.3	-	JZGM01	322	5840	5371	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372443	GCA_002176025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/025/GCA_002176025.1_ASM217602v1	-	UMDUCS58
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40135	65.6	-	MQCP01	15	4285	4095	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010181	GCA_001943425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/425/GCA_001943425.1_ASM194342v1	-	I0001112-7
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.15596	39.5	-	CREY01	61	2372	2134	3/23/15	3/11/17	Scaffold	SC	SAMEA1024687	GCA_001197855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/855/GCA_001197855.1_6731_6_3	-	SMRU1107
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.13095	39.5	-	CRGC01	39	2361	2129	3/23/15	3/11/17	Scaffold	SC	SAMEA1025606	GCA_001197915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/915/GCA_001197915.1_6736_5_2	-	SMRU1226
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39308	65.6	-	MQAO01	3	4263	4113	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010126	GCA_001943825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/825/GCA_001943825.1_ASM194382v1	-	I0005229-5
Escherichia coli	562	PRJNA276360	276360	Proteobacteria	Gammaproteobacteria	5.36451	50.3	-	JZGD01	392	5799	5296	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372431	GCA_002176035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/035/GCA_002176035.1_ASM217603v1	-	UMDUCS46
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.92275	52.1	-	NAAT01	104	5046	4805	4/13/17	4/17/17	Contig	Cornell University	SAMN04394834	GCA_002091235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/235/GCA_002091235.1_ASM209123v1	-	R9_0437_R1
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87964	32.6	-	CSGD01	26	3047	2893	3/23/15	3/4/17	Contig	SC	SAMEA1466532	GCA_001192775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/775/GCA_001192775.1_7907_4_49	-	USFL142
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88086	32.6	-	CSIT01	66	3044	2898	3/23/15	3/4/17	Contig	SC	SAMEA1324554	GCA_001192855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/855/GCA_001192855.1_7748_4_88	-	USFL086
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.97606	52.1	-	NAAW01	122	5148	4887	4/13/17	4/17/17	Contig	Cornell University	SAMN04394842	GCA_002091255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/255/GCA_002091255.1_ASM209125v1	-	R8_8081_R1
Escherichia coli	562	PRJNA276367	276367	Proteobacteria	Gammaproteobacteria	5.36779	50.3	-	JZGH01	282	5828	5347	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372436	GCA_002176045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/045/GCA_002176045.1_ASM217604v1	-	UMDUCS51
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38974	65.6	-	MQAZ01	4	4266	4100	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010138	GCA_001943905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/905/GCA_001943905.1_ASM194390v1	-	I0005726-0
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.94297	39.7	-	CRYF01	56	2145	1950	3/22/15	3/11/17	Scaffold	SC	SAMEA970246	GCA_001197995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/995/GCA_001197995.1_5242_7_9	-	BHN586
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.19559	39.7	-	CQUK01	66	2436	2202	3/22/15	3/11/17	Scaffold	SC	SAMEA1025656	GCA_001198015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/015/GCA_001198015.1_6710_6_15	-	SMRU1359
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39383	65.6	-	MQBI01	13	4264	4097	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010147	GCA_001943975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/975/GCA_001943975.1_ASM194397v1	-	I0002074-8
Escherichia coli	562	PRJNA276375	276375	Proteobacteria	Gammaproteobacteria	5.36766	50.3	-	JZGN01	304	5861	5331	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372444	GCA_002176095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/095/GCA_002176095.1_ASM217609v1	-	UMDUCS59
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.9892	52.2	-	NAAU01	115	5143	4893	4/13/17	4/17/17	Contig	Cornell University	SAMN04394830	GCA_002091275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/275/GCA_002091275.1_ASM209127v1	-	R9_0042_R1
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.93735	32.6	-	CSJF01	32	3100	2974	3/23/15	3/4/17	Contig	SC	SAMEA1324531	GCA_001192915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/915/GCA_001192915.1_7738_3_71	-	USFL257
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.83552	32.6	-	CSHX01	34	2978	2855	3/23/15	3/4/17	Contig	SC	SAMEA1324520	GCA_001192955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/955/GCA_001192955.1_7738_3_2	-	USFL190
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	5.10821	52.1	-	NAAS01	164	5297	5019	4/13/17	4/17/17	Contig	Cornell University	SAMN04394784	GCA_002091285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/285/GCA_002091285.1_ASM209128v1	-	R9_3269_R1
Escherichia coli	562	PRJNA276318	276318	Proteobacteria	Gammaproteobacteria	5.40586	50.3	-	JZFE01	279	5860	5391	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372388	GCA_002176105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/105/GCA_002176105.1_ASM217610v1	-	UMDUCS3
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38427	65.6	-	MQBO01	31	4265	4102	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010153	GCA_001943995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/943/995/GCA_001943995.1_ASM194399v1	-	I0003150-5
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07691	39.7	-	CRAT01	60	2302	2081	3/23/15	3/10/17	Scaffold	SC	SAMEA1025050	GCA_001198035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/035/GCA_001198035.1_6730_7_2	-	SMRU698
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07901	39.7	-	CRHZ01	68	2297	2080	3/23/15	3/11/17	Scaffold	SC	SAMEA1025296	GCA_001198075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/075/GCA_001198075.1_6736_8_14	-	SMRU1310
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37535	65.6	-	MQBY01	10	4248	4078	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010163	GCA_001944055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/055/GCA_001944055.1_ASM194405v1	-	I0000829-7
Escherichia coli	562	PRJNA276315	276315	Proteobacteria	Gammaproteobacteria	5.36879	50.3	-	JZFC01	299	5828	5353	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372386	GCA_002176115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/115/GCA_002176115.1_ASM217611v1	-	UMDUCS1
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	4.99342	52.1	-	NAAJ01	146	5166	4902	4/13/17	4/17/17	Contig	Cornell University	SAMN04394854	GCA_002091315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/315/GCA_002091315.1_ASM209131v1	-	R9_3278_R1
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.77827	32.6	-	CSEJ01	27	2905	2789	3/22/15	3/4/17	Contig	SC	SAMEA1466482	GCA_001193115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/115/GCA_001193115.1_7907_4_30	-	USFL123
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.90115	32.6	-	CSFN01	66	3050	2911	3/23/15	3/4/17	Contig	SC	SAMEA1324677	GCA_001193135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/135/GCA_001193135.1_7748_4_22	-	USFL021
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	5.02026	52.1	-	NAAQ01	103	5190	4941	4/13/17	4/17/17	Contig	Cornell University	SAMN04394799	GCA_002091335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/335/GCA_002091335.1_ASM209133v1	-	R9_3271_R1
Escherichia coli	562	PRJNA276316	276316	Proteobacteria	Gammaproteobacteria	5.43435	50.3	-	JZFF01	272	5895	5428	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372389	GCA_002176135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/135/GCA_002176135.1_ASM217613v1	-	UMDUCS4
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38369	65.6	-	MQCB01	6	4259	4098	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010166	GCA_001944065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/065/GCA_001944065.1_ASM194406v1	-	I0002960-8
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.17339	39.4	-	CRND01	69	2393	2125	3/22/15	3/11/17	Scaffold	SC	SAMEA1024885	GCA_001198175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/175/GCA_001198175.1_6755_3_6	-	6A
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10334	39.5	-	CRQO01	55	2312	2097	3/23/15	3/11/17	Scaffold	SC	SAMEA1024720	GCA_001198215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/215/GCA_001198215.1_6791_6_1	-	SMRU625
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37743	65.6	-	MQBV01	11	4251	4073	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010160	GCA_001944075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/075/GCA_001944075.1_ASM194407v1	-	I0000590-5
Escherichia coli	562	PRJNA276321	276321	Proteobacteria	Gammaproteobacteria	5.3684	50.3	-	JZFG01	265	5824	5362	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372392	GCA_002176175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/175/GCA_002176175.1_ASM217617v1	-	UMDUCS7
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	5.07777	51.9	-	NAAO01	119	5255	5006	4/13/17	4/17/17	Contig	Cornell University	SAMN04394891	GCA_002091345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/345/GCA_002091345.1_ASM209134v1	-	R9_3273_R1
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87744	32.6	-	CSBM01	32	3023	2891	3/23/15	3/4/17	Contig	SC	SAMEA1324713	GCA_001193255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/255/GCA_001193255.1_7738_3_8	-	USFL196
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.75855	32.7	-	CSOM01	31	2823	2685	3/23/15	3/4/17	Contig	SC	SAMEA1463318	GCA_001193355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/355/GCA_001193355.1_7907_7_22	-	BSAR205
Salmonella enterica subsp. enterica serovar Cerro	340188	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.65956	52.2	-	NBPB01	73	4784	4482	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902443	GCA_002105795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/795/GCA_002105795.1_ASM210579v1	-	NY_FSL P3-1140
Escherichia coli	562	PRJNA276325	276325	Proteobacteria	Gammaproteobacteria	5.45039	50.3	-	JZFJ01	322	5905	5421	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372396	GCA_002176185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/185/GCA_002176185.1_ASM217618v1	-	UMDUCS11
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38405	65.6	-	MQDU01	24	4265	4095	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010212	GCA_001944445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/445/GCA_001944445.1_ASM194444v1	-	I0001085-5
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.04691	39.5	-	CRFB01	98	2243	2025	3/22/15	3/10/17	Scaffold	SC	SAMEA1024650	GCA_001198235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/235/GCA_001198235.1_6731_6_5	-	SMRU1109
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10797	39.7	-	CQXT01	71	2271	2027	3/22/15	3/11/17	Scaffold	SC	SAMEA1024792	GCA_001198255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/255/GCA_001198255.1_6730_1_9	-	SMRU585
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38482	65.6	-	MQEB01	4	4257	4100	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010219	GCA_001944555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/555/GCA_001944555.1_ASM194455v1	-	I0000296-9
Escherichia coli	562	PRJNA276330	276330	Proteobacteria	Gammaproteobacteria	5.38482	50.3	-	JZFM01	289	5842	5371	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372401	GCA_002176195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/195/GCA_002176195.1_ASM217619v1	-	UMDUCS16
Salmonella enterica subsp. enterica	59201	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.65268	52.2	-	NBOY01	107	4788	4476	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902447	GCA_002105805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/805/GCA_002105805.1_ASM210580v1	-	NY_FSL P3-1548
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88144	32.6	-	CSIQ01	46	3027	2895	3/23/15	3/4/17	Contig	SC	SAMEA1324636	GCA_001193715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/715/GCA_001193715.1_7748_4_18	-	USFL018
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88038	32.6	-	CSEW01	28	3029	2906	3/23/15	3/4/17	Contig	SC	SAMEA1324544	GCA_001193795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/795/GCA_001193795.1_7738_3_90	-	USFL276
Salmonella enterica subsp. enterica serovar Copenhagen	486990	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.98745	52.1	-	NBOZ01	78	5182	4886	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902446	GCA_002105815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/815/GCA_002105815.1_ASM210581v1	-	NY_FSL C7-1193
Escherichia coli	562	PRJNA276327	276327	Proteobacteria	Gammaproteobacteria	5.36164	50.3	-	JZFK01	289	5789	5336	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372398	GCA_002176215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/215/GCA_002176215.1_ASM217621v1	-	UMDUCS13
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34271	65.6	-	MQEM01	18	4240	4070	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010230	GCA_001944775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/775/GCA_001944775.1_ASM194477v1	-	I0002848-5
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10308	39.6	-	CRVZ01	68	2306	2072	3/22/15	3/11/17	Scaffold	SC	SAMEA1026051	GCA_001198315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/315/GCA_001198315.1_6805_7_8	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.22775	39.4	-	CRDM01	143	2465	2218	3/22/15	3/11/17	Scaffold	SC	SAMEA1024762	GCA_001198475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/475/GCA_001198475.1_6731_4_2	-	SMRU1058
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37634	65.6	-	MQET01	15	4267	4100	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010237	GCA_001944925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/944/925/GCA_001944925.1_ASM194492v1	-	I0001631-6
Escherichia coli	562	PRJNA276333	276333	Proteobacteria	Gammaproteobacteria	5.31419	50.3	-	JZFP01	330	5763	5303	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372404	GCA_002176255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/255/GCA_002176255.1_ASM217625v1	-	UMDUCS19
Salmonella enterica subsp. enterica serovar Cerro	340188	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.67161	52.3	-	NBPG01	40	4719	4497	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902450	GCA_002105825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/825/GCA_002105825.1_ASM210582v1	-	NY_FSL S10-939
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.79443	32.8	-	CSBJ01	17	2883	2718	3/22/15	3/4/17	Contig	SC	SAMEA1463311	GCA_001193975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/975/GCA_001193975.1_7907_7_40	-	BSAR136_2
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.89831	32.6	-	CSHY01	37	3040	2910	3/22/15	3/4/17	Contig	SC	SAMEA1324562	GCA_001194165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/165/GCA_001194165.1_7738_4_20	-	USFL301
Salmonella enterica subsp. enterica serovar Cerro	340188	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.63793	52.2	-	NBPM01	82	4766	4470	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902435	GCA_002105875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/875/GCA_002105875.1_ASM210587v1	-	NY_FSL S10-732
Escherichia coli	562	PRJNA276334	276334	Proteobacteria	Gammaproteobacteria	5.3458	50.3	-	JZFQ01	309	5783	5312	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372405	GCA_002176265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/265/GCA_002176265.1_ASM217626v1	-	UMDUCS20
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3824	65.6	-	MQEY01	13	4261	4094	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010242	GCA_001945065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/065/GCA_001945065.1_ASM194506v1	-	I0004304-7
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.18368	39.7	-	CRDL01	99	2335	2077	3/23/15	3/11/17	Scaffold	SC	SAMEA1024842	GCA_001198495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/495/GCA_001198495.1_6731_4_15	-	SMRU1071
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09041	39.8	-	CRFF01	52	2288	2070	3/22/15	3/10/17	Scaffold	SC	SAMEA1025503	GCA_001198535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/535/GCA_001198535.1_6736_4_13	-	SMRU1213
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39272	65.6	-	MQEZ01	8	4265	4106	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010243	GCA_001945075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/075/GCA_001945075.1_ASM194507v1	-	I0001162-2
Escherichia coli	562	PRJNA276339	276339	Proteobacteria	Gammaproteobacteria	5.44407	50.3	-	JZFT01	257	5935	5466	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372410	GCA_002176275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/275/GCA_002176275.1_ASM217627v1	-	UMDUCS25
"Salmonella enterica subsp. enterica serovar 6,7:-:1,5"	1192783	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.68135	52.2	-	NBPK01	58	4734	4499	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902438	GCA_002105885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/885/GCA_002105885.1_ASM210588v1	-	NY_FSL P3-1109
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.86961	32.6	-	CSBO01	36	3044	2888	3/23/15	3/4/17	Contig	SC	SAMEA1466539	GCA_001194245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/245/GCA_001194245.1_7907_4_37	-	USFL130
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87709	32.6	-	CSCN01	34	3023	2891	3/23/15	3/4/17	Contig	SC	SAMEA1324727	GCA_001194265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/265/GCA_001194265.1_7738_4_36	-	USFL317
Salmonella enterica subsp. enterica serovar Baildon	913068	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.72545	52.2	-	NBPH01	56	4803	4576	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902449	GCA_002105895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/895/GCA_002105895.1_ASM210589v1	-	NY_FSL S10-975
Escherichia coli	562	PRJNA276340	276340	Proteobacteria	Gammaproteobacteria	5.43302	50.3	-	JZFU01	268	5923	5456	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372411	GCA_002176295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/295/GCA_002176295.1_ASM217629v1	-	UMDUCS26
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39812	65.6	-	MQFD01	9	4275	4116	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010247	GCA_001945145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/145/GCA_001945145.1_ASM194514v1	-	I0005268-3
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.19244	39.5	-	CRUO01	61	2470	2214	3/22/15	3/11/17	Scaffold	SC	SAMEA1025153	GCA_001198555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/555/GCA_001198555.1_6805_6_1	-	SMRU1705
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10663	39.7	-	CQWP01	123	2235	1973	3/23/15	3/11/17	Scaffold	SC	SAMEA1024612	GCA_001198615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/615/GCA_001198615.1_6714_7_18	-	SMRU762
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38981	65.6	-	MQFK01	13	4266	4100	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010254	GCA_001945285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/285/GCA_001945285.1_ASM194528v1	-	I0002107-6
Escherichia coli	562	PRJNA276346	276346	Proteobacteria	Gammaproteobacteria	5.37813	50.3	-	JZFW01	290	5836	5365	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372417	GCA_002176335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/335/GCA_002176335.1_ASM217633v1	-	UMDUCS32
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.68444	52.2	-	NBPJ01	48	4729	4501	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902439	GCA_002105905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/905/GCA_002105905.1_ASM210590v1	-	NY_FSL P3-1113
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.93202	32.6	-	CSET01	53	3102	2969	3/23/15	3/4/17	Contig	SC	SAMEA1466460	GCA_001194285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/285/GCA_001194285.1_7907_4_14	-	USFL108
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87824	32.6	-	CSDE01	33	3020	2900	3/23/15	3/4/17	Contig	SC	SAMEA1324620	GCA_001194445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/445/GCA_001194445.1_7738_4_58	-	USFL339
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.68324	52.2	-	NBPQ01	48	4729	4499	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902431	GCA_002105955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/955/GCA_002105955.1_ASM210595v1	-	NY_FSL S10-717
Escherichia coli	562	PRJNA276352	276352	Proteobacteria	Gammaproteobacteria	5.39929	50.2	-	JZFY01	386	5879	5388	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372423	GCA_002176345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/345/GCA_002176345.1_ASM217634v1	-	UMDUCS38
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40065	65.6	-	MQKW01	15	4273	4103	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010326	GCA_001945775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/775/GCA_001945775.1_ASM194577v1	-	I0000470-0
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.05752	39.6	-	CRMS01	85	2274	2033	3/23/15	3/10/17	Scaffold	SC	SAMEA1025030	GCA_001198635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/635/GCA_001198635.1_6755_3_15	-	SMRU879
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.15751	39.7	-	CQXJ01	70	2309	2056	3/23/15	3/11/17	Scaffold	SC	SAMEA1024974	GCA_001198655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/655/GCA_001198655.1_6730_1_19	-	SMRU595
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39188	65.6	-	MQKT01	19	4273	4097	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010323	GCA_001945785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/785/GCA_001945785.1_ASM194578v1	-	I0000122-7
Escherichia coli	562	PRJNA276353	276353	Proteobacteria	Gammaproteobacteria	5.4925	50.2	-	JZFZ01	344	6017	5503	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372424	GCA_002176355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/355/GCA_002176355.1_ASM217635v1	-	UMDUCS39
Salmonella enterica subsp. enterica serovar Give	46626	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.8159	52.2	-	NBPS01	52	4935	4671	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902429	GCA_002105965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/965/GCA_002105965.1_ASM210596v1	-	NY_FSL S10-560
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92296	32.6	-	CSEL01	38	3088	2962	3/23/15	3/4/17	Contig	SC	SAMEA1324681	GCA_001194465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/465/GCA_001194465.1_7748_4_77	-	USFL075
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88	32.6	-	CSGA01	28	3026	2895	3/23/15	3/4/17	Contig	SC	SAMEA1324640	GCA_001194505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/505/GCA_001194505.1_7738_4_48	-	USFL329
Salmonella enterica subsp. enterica serovar Give	46626	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.81145	52.2	-	NBPN01	57	4926	4667	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902434	GCA_002105985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/985/GCA_002105985.1_ASM210598v1	-	NY_FSL P3-930
Escherichia coli	562	PRJNA276361	276361	Proteobacteria	Gammaproteobacteria	5.3863	50.3	-	JZGE01	322	5834	5347	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372432	GCA_002176385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/385/GCA_002176385.1_ASM217638v1	-	UMDUCS47
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37961	65.6	-	MQKX01	10	4253	4084	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010327	GCA_001945845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/945/845/GCA_001945845.1_ASM194584v1	-	C0000604-0
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09664	39.7	-	CRGV01	48	2324	2091	3/23/15	3/11/17	Scaffold	SC	SAMEA1025478	GCA_001198675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/675/GCA_001198675.1_6736_6_24	-	SMRU1272
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10674	39.6	-	CRMC01	69	2303	2055	3/22/15	3/10/17	Scaffold	SC	SAMEA1025049	GCA_001198735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/735/GCA_001198735.1_6755_2_17	-	SMRU809
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41463	65.6	-	MQLF01	29	4309	4119	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010335	GCA_001946025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/025/GCA_001946025.1_ASM194602v1	-	I0001247-1
Escherichia coli	562	PRJNA276362	276362	Proteobacteria	Gammaproteobacteria	5.40651	50.3	-	JZGF01	268	5888	5401	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372433	GCA_002176415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/415/GCA_002176415.1_ASM217641v1	-	UMDUCS48
"Salmonella enterica subsp. houtenae serovar 40:z4,z32:-"	1974322	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.67437	51.6	-	NBPO01	55	4707	4325	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902433	GCA_002105995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/995/GCA_002105995.1_ASM210599v1	-	NY_FSL S10-730
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87744	32.6	-	CSCI01	32	3025	2896	3/23/15	3/4/17	Contig	SC	SAMEA1466475	GCA_001194545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/545/GCA_001194545.1_7907_4_56	-	USFL149
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.83371	32.7	-	CSIW01	45	2989	2849	3/23/15	3/4/17	Contig	SC	SAMEA1324721	GCA_001194585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/585/GCA_001194585.1_7748_4_48	-	USFL047
Salmonella enterica subsp. enterica serovar Cerro	340188	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.68079	52.2	-	NBPT01	63	4811	4522	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902428	GCA_002106035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/035/GCA_002106035.1_ASM210603v1	-	NY_FSL S10-545
Escherichia coli	562	PRJNA276364	276364	Proteobacteria	Gammaproteobacteria	5.3771	50.3	-	JZGG01	262	5820	5358	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372435	GCA_002176425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/425/GCA_002176425.1_ASM217642v1	-	UMDUCS50
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39174	65.6	-	MQLL01	17	4270	4099	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010341	GCA_001946085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/085/GCA_001946085.1_ASM194608v1	-	I0000841-2
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07063	39.7	-	CRPJ01	70	2279	2079	3/23/15	3/4/17	Scaffold	SC	SAMEA1024829	GCA_001198835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/835/GCA_001198835.1_6775_1_15	-	SMRU831
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12172	39.6	-	CRXI01	66	2285	2021	3/23/15	3/6/17	Scaffold	SC	SAMEA1025419	GCA_001198875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/875/GCA_001198875.1_6807_2_2	-	SMRU1586
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36266	65.6	-	MQLK01	58	4285	4095	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010340	GCA_001946095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/095/GCA_001946095.1_ASM194609v1	-	I0000466-8
Escherichia coli	562	PRJNA276368	276368	Proteobacteria	Gammaproteobacteria	5.39546	50.3	-	JZGI01	275	5837	5368	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372437	GCA_002176435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/435/GCA_002176435.1_ASM217643v1	-	UMDUCS52
Salmonella enterica subsp. enterica serovar Cerro	340188	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.65979	52.2	-	NBPU01	63	4776	4491	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902427	GCA_002106055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/055/GCA_002106055.1_ASM210605v1	-	NY_FSL P3-592
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87476	32.6	-	CSEA01	34	3022	2899	3/22/15	3/4/17	Contig	SC	SAMEA1324581	GCA_001194705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/705/GCA_001194705.1_7738_4_30	-	USFL311
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.82718	32.7	-	CSPF01	41	2921	2771	3/22/15	3/4/17	Contig	SC	SAMEA1463485	GCA_001194725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/725/GCA_001194725.1_7907_7_74	-	BSAR178_2
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.68346	52.2	-	NBPV01	45	4733	4503	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902426	GCA_002106065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/065/GCA_002106065.1_ASM210606v1	-	NY_FSL S10-354
Escherichia coli	562	PRJNA276369	276369	Proteobacteria	Gammaproteobacteria	5.37573	50.3	-	JZGJ01	351	5848	5364	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372438	GCA_002176475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/475/GCA_002176475.1_ASM217647v1	-	UMDUCS53
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38853	65.6	-	MQLJ01	17	4284	4112	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010339	GCA_001946105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/105/GCA_001946105.1_ASM194610v1	-	I0000946-9
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.13166	39.8	-	CQWF01	122	2288	2056	3/22/15	3/4/17	Scaffold	SC	SAMEA1024765	GCA_001198895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/895/GCA_001198895.1_6714_7_10	-	SMRU754
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11031	39.7	-	CREF01	66	2324	2101	3/23/15	3/4/17	Scaffold	SC	SAMEA1024929	GCA_001198935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/935/GCA_001198935.1_6731_5_15	-	SMRU1095
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40057	65.6	-	MQLO01	11	4271	4108	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010345	GCA_001946175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/175/GCA_001946175.1_ASM194617v1	-	M0003226-9
Escherichia coli	562	PRJNA276370	276370	Proteobacteria	Gammaproteobacteria	5.28343	50.3	-	JZGK01	325	5742	5270	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372439	GCA_002176495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/495/GCA_002176495.1_ASM217649v1	-	UMDUCS54
Salmonella enterica subsp. enterica serovar Cerro	340188	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.67402	52.2	-	NBPW01	71	4803	4508	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902425	GCA_002106095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/095/GCA_002106095.1_ASM210609v1	-	NY_FSL S10-228
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87704	32.7	-	CSCW01	37	3049	2920	3/22/15	3/5/17	Contig	SC	SAMEA1324671	GCA_001194885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/885/GCA_001194885.1_7748_4_52	-	USFL051
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87806	32.6	-	CSBY01	38	3020	2893	3/23/15	3/4/17	Contig	SC	SAMEA1466511	GCA_001194965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/965/GCA_001194965.1_7907_4_66	-	USFL159
"Salmonella enterica subsp. houtenae serovar 40:z4,z32:-"	1974322	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.6748	51.6	-	NBPX01	70	4701	4324	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902424	GCA_002106115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/115/GCA_002106115.1_ASM210611v1	-	NY_FSL C7-523
Escherichia coli	562	PRJNA276376	276376	Proteobacteria	Gammaproteobacteria	5.40778	50.3	-	JZGO01	310	5856	5404	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372445	GCA_002176505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/505/GCA_002176505.1_ASM217650v1	-	UMDUCS60
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39444	65.6	-	MQFP01	60	4312	4109	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010348	GCA_001946245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/245/GCA_001946245.1_ASM194624v1	-	I0001330-5
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.13397	39.5	-	CQVF01	46	2354	2132	3/23/15	3/4/17	Scaffold	SC	SAMEA1025407	GCA_001198995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/995/GCA_001198995.1_6710_7_21	-	SMRU1389
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08516	39.6	-	CRVM01	55	2289	2054	3/23/15	3/4/17	Scaffold	SC	SAMEA1025796	GCA_001199075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/075/GCA_001199075.1_6805_7_14	-	SMRU1743
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38985	65.6	-	MQFQ01	44	4283	4101	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010349	GCA_001946255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/255/GCA_001946255.1_ASM194625v1	-	I0001331-3
Escherichia coli	562	PRJNA276373	276373	Proteobacteria	Gammaproteobacteria	5.30218	50.3	-	JZGL01	367	5728	5261	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372442	GCA_002176515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/515/GCA_002176515.1_ASM217651v1	-	UMDUCS57
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.71962	52.1	-	NBPY01	44	4774	4527	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902423	GCA_002106135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/135/GCA_002106135.1_ASM210613v1	-	NY_FSL C7-325
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92424	32.6	-	CSJR01	43	3098	2968	3/22/15	3/4/17	Contig	SC	SAMEA1324772	GCA_001195025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/025/GCA_001195025.1_7738_4_2	-	USFL284
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92616	32.6	-	CSDH01	30	3094	2968	3/23/15	3/4/17	Contig	SC	SAMEA1466484	GCA_001195085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/085/GCA_001195085.1_7907_4_5	-	USFL099
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.68269	52.2	-	NBPZ01	60	4731	4504	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902421	GCA_002106145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/145/GCA_002106145.1_ASM210614v1	-	NY_FSL C7-150
Escherichia coli	562	PRJNA276377	276377	Proteobacteria	Gammaproteobacteria	5.40365	50.3	-	JZGP01	316	5860	5389	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372446	GCA_002176635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/635/GCA_002176635.1_ASM217663v1	-	UMDUCS61
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40582	65.6	-	MQGB01	26	4294	4119	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010360	GCA_001946425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/425/GCA_001946425.1_ASM194642v1	-	I0001929-4
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09237	39.7	-	CRWX01	78	2300	2092	3/23/15	3/4/17	Scaffold	SC	SAMEA1025317	GCA_001199095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/095/GCA_001199095.1_6807_2_10	-	SMRU1594
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.15749	39.5	-	CRSG01	59	2394	2150	3/23/15	3/4/17	Scaffold	SC	SAMEA1025560	GCA_001199215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/215/GCA_001199215.1_6805_2_22	-	SMRU1438
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36926	65.6	-	MQGU01	37	4272	4080	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010379	GCA_001946565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/565/GCA_001946565.1_ASM194656v1	-	I0002288-4
Escherichia coli	562	PRJNA276379	276379	Proteobacteria	Gammaproteobacteria	5.40944	50.2	-	JZGR01	309	5892	5408	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372448	GCA_002176645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/645/GCA_002176645.1_ASM217664v1	-	UMDUCS63
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.95111	52.1	-	NBQE01	70	5120	4869	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902460	GCA_002106175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/175/GCA_002106175.1_ASM210617v1	-	NY_FSL S10-1269
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.86574	32.6	-	CSDB01	31	3010	2879	3/22/15	3/4/17	Contig	SC	SAMEA1324743	GCA_001195305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/305/GCA_001195305.1_7738_3_10	-	USFL198
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.9227	32.6	-	CSHQ01	37	3095	2956	3/22/15	3/4/17	Contig	SC	SAMEA1324537	GCA_001195345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/345/GCA_001195345.1_7738_3_17	-	USFL205
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.80556	52.2	-	NBQG01	129	4918	4654	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902502	GCA_002106215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/215/GCA_002106215.1_ASM210621v1	-	NY_FSL S10-1226
Escherichia coli	562	PRJNA276380	276380	Proteobacteria	Gammaproteobacteria	5.36052	50.3	-	JZGS01	346	5855	5355	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372449	GCA_002176665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/665/GCA_002176665.1_ASM217666v1	-	UMDUCS64
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.36592	65.6	-	MQGY01	24	4266	4086	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010383	GCA_001946585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/585/GCA_001946585.1_ASM194658v1	-	I0002943-4
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.1419	39.7	-	CRGE01	48	2330	2103	3/22/15	3/4/17	Scaffold	SC	SAMEA1025299	GCA_001199315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/315/GCA_001199315.1_6736_5_21	-	SMRU1245
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10524	39.6	-	CRBQ01	80	2301	2056	3/22/15	3/11/17	Scaffold	SC	SAMEA1024928	GCA_001199335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/335/GCA_001199335.1_6731_1_11	-	SMRU995
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41244	65.6	-	MQGR01	20	4290	4106	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010376	GCA_001946605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/605/GCA_001946605.1_ASM194660v1	-	I0002631-5
Escherichia coli	562	PRJNA276389	276389	Proteobacteria	Gammaproteobacteria	5.38238	50.3	-	JZGY01	307	5828	5348	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372458	GCA_002176735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/735/GCA_002176735.1_ASM217673v1	-	UMDUCS73
Salmonella enterica subsp. enterica	59201	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.64728	52.3	-	NBQH01	110	4778	4481	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902501	GCA_002106225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/225/GCA_002106225.1_ASM210622v1	-	NY_FSL S10-1823
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.80687	32.7	-	CSHC01	23	2954	2810	3/23/15	3/4/17	Contig	SC	SAMEA1324617	GCA_001195485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/485/GCA_001195485.1_7738_4_9	-	USFL291
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.83145	32.7	-	CSBZ01	37	2977	2851	3/23/15	3/4/17	Contig	SC	SAMEA1324615	GCA_001195585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/585/GCA_001195585.1_7738_4_28	-	USFL309
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.68463	52.2	-	NBQK01	79	4727	4498	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902498	GCA_002106235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/235/GCA_002106235.1_ASM210623v1	-	NY_FSL S10-1818
Escherichia coli	562	PRJNA276381	276381	Proteobacteria	Gammaproteobacteria	5.39015	50.3	-	JZGT01	315	5854	5361	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372450	GCA_002176745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/745/GCA_002176745.1_ASM217674v1	-	UMDUCS65
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34803	65.6	-	MQHB01	23	4258	4080	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010386	GCA_001946645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/645/GCA_001946645.1_ASM194664v1	-	I0003305-5
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10781	39.8	-	CRUU01	57	2284	2067	3/23/15	3/14/17	Scaffold	SC	SAMEA1025131	GCA_001199395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/395/GCA_001199395.1_6805_6_2	-	SMRU1706
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.19331	39.6	-	CRUW01	70	2437	2188	3/23/15	3/11/17	Scaffold	SC	SAMEA1025458	GCA_001199435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/435/GCA_001199435.1_6805_6_23	-	SMRU1727
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40108	65.6	-	MQHM01	23	4288	4094	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010397	GCA_001946675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/675/GCA_001946675.1_ASM194667v1	-	I0002973-1
Escherichia coli	562	PRJNA276384	276384	Proteobacteria	Gammaproteobacteria	5.37041	50.3	-	JZGV01	265	5830	5367	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372453	GCA_002176795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/795/GCA_002176795.1_ASM217679v1	-	UMDUCS68
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.9291	52.2	-	NBQL01	95	5073	4833	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902497	GCA_002106275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/275/GCA_002106275.1_ASM210627v1	-	NY_FSL S10-1813
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.93795	32.7	-	CSDZ01	56	3116	2980	3/23/15	3/4/17	Contig	SC	SAMEA1324596	GCA_001195605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/605/GCA_001195605.1_7738_4_8	-	USFL290
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87859	32.6	-	CSGL01	47	3023	2890	3/23/15	3/4/17	Contig	SC	SAMEA1710082	GCA_001195805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/805/GCA_001195805.1_9266_1_15	-	FL369
Salmonella enterica subsp. enterica serovar Cerro	340188	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.65813	52.2	-	NBQN01	72	4774	4478	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902495	GCA_002106295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/295/GCA_002106295.1_ASM210629v1	-	NY_FSL S10-1809
Escherichia coli	562	PRJNA276378	276378	Proteobacteria	Gammaproteobacteria	5.38344	50.3	-	JZGQ01	289	5838	5345	6/7/17	6/10/17	Contig	"University of Maryland, College Park"	SAMN03372447	GCA_002179755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/755/GCA_002179755.1_ASM217975v1	-	UMDUCS62
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39637	65.6	-	MQLT01	20	4275	4096	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010406	GCA_001946755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/755/GCA_001946755.1_ASM194675v1	-	I0004144-7
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.11108	39.6	-	CRWJ01	64	2335	2095	3/23/15	3/11/17	Scaffold	SC	SAMEA1025254	GCA_001199475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/475/GCA_001199475.1_6807_1_21	-	SMRU1581
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11555	39.6	-	CRCT01	77	2329	2110	3/22/15	3/11/17	Scaffold	SC	SAMEA1024740	GCA_001199515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/515/GCA_001199515.1_6731_3_18	-	SMRU1050
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37884	65.6	-	MQMD01	29	4276	4097	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010416	GCA_001946815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/815/GCA_001946815.1_ASM194681v1	-	I0002932-7
Escherichia coli	562	PRJNA276390	276390	Proteobacteria	Gammaproteobacteria	5.39164	50.3	-	JZGZ01	305	5841	5369	6/7/17	6/10/17	Contig	"University of Maryland, College Park"	SAMN03372459	GCA_002179775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/179/775/GCA_002179775.1_ASM217977v1	-	UMDUCS74
Salmonella enterica subsp. enterica	59201	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.6511	52.2	-	NBOX01	68	4770	4475	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902448	GCA_002106315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/315/GCA_002106315.1_ASM210631v1	-	NY_FSL P3-1550
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87119	32.7	-	CSHV01	31	3021	2898	3/23/15	3/4/17	Contig	SC	SAMEA1324654	GCA_001195925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/925/GCA_001195925.1_7738_4_54	-	USFL335
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88016	32.6	-	CSFW01	33	3035	2898	3/23/15	3/4/17	Contig	SC	SAMEA1324650	GCA_001195945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/945/GCA_001195945.1_7738_4_53	-	USFL334
Salmonella enterica subsp. enterica serovar Cerro	340188	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.69141	52.2	-	NBPA01	82	4826	4528	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902445	GCA_002106325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/325/GCA_002106325.1_ASM210632v1	-	NY_FSL S10-861
Escherichia coli	562	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	4.9005	50.7	-	NDCE01	112	5105	4778	6/8/17	6/10/17	Contig	JCVI	SAMN06218076	GCA_002180815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/180/815/GCA_002180815.1_ASM218081v1	-	39913
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40824	65.6	-	MQHY01	7	4273	4106	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010423	GCA_001946865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/865/GCA_001946865.1_ASM194686v1	-	I0004311-2
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.22217	39.5	-	CRTH01	93	2458	2204	3/23/15	3/11/17	Scaffold	SC	SAMEA1025224	GCA_001199575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/575/GCA_001199575.1_6805_4_2	-	SMRU1658
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.13336	39.6	-	CRMD01	100	2379	2124	3/22/15	3/11/17	Scaffold	SC	SAMEA1025059	GCA_001199715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/715/GCA_001199715.1_6755_2_2	-	SMRU794
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38806	65.6	-	MQIB01	19	4268	4096	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010426	GCA_001946875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/875/GCA_001946875.1_ASM194687v1	-	I0003964-9
Escherichia coli	562	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	5.19477	50.8	-	NDBU01	104	5439	5099	6/8/17	6/10/17	Contig	JCVI	SAMN06218042	GCA_002181625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/181/625/GCA_002181625.1_ASM218162v1	-	39888
Salmonella enterica subsp. enterica serovar Holcomb	1974319	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.92468	52.1	-	NBPC01	69	5115	4796	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902442	GCA_002106355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/355/GCA_002106355.1_ASM210635v1	-	NY_FSL C7-1028
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.84108	32.6	-	CSGI01	26	2977	2848	3/22/15	3/4/17	Contig	SC	SAMEA1466494	GCA_001196025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/025/GCA_001196025.1_7907_4_42	-	USFL135
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92202	32.6	-	CSIL01	32	3092	2962	3/22/15	3/4/17	Contig	SC	SAMEA1466518	GCA_001196145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/145/GCA_001196145.1_7907_4_65	-	USFL158
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.68801	52.2	-	NBPD01	50	4731	4505	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902441	GCA_002106375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/375/GCA_002106375.1_ASM210637v1	-	NY_FSL S10-880
Escherichia coli	562	PRJNA339843	339843	Proteobacteria	Gammaproteobacteria	4.94546	50.7	-	NDEG01	136	5170	4812	6/8/17	6/10/17	Contig	JCVI	SAMN06218054	GCA_002182025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/182/025/GCA_002182025.1_ASM218202v1	-	42189
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38659	65.6	-	MQIT01	17	4275	4110	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010444	GCA_001946995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/946/995/GCA_001946995.1_ASM194699v1	-	I0003889-8
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.19664	39.5	-	CQYG01	54	2441	2205	3/22/15	3/11/17	Scaffold	SC	SAMEA1024685	GCA_001199795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/795/GCA_001199795.1_6730_3_23	-	SMRU623
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.13073	39.6	-	CQWQ01	147	2340	2094	3/23/15	3/11/17	Scaffold	SC	SAMEA1024602	GCA_001199835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/835/GCA_001199835.1_6714_7_19	-	SMRU763
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38931	65.6	-	MQJA01	36	4276	4097	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010451	GCA_001947035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/035/GCA_001947035.1_ASM194703v1	-	M0020190-6
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.04208	50.4	-	LYCV01	242	5192	4878	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05017704	GCA_002189715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/715/GCA_002189715.1_ASM218971v1	-	ECOR54
Salmonella enterica subsp. enterica serovar Gaminara	913070	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	5.08862	52.2	-	NBPF01	69	5266	4969	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902451	GCA_002106395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/395/GCA_002106395.1_ASM210639v1	-	NY_FSL S10-1055
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88514	32.6	-	CSCP01	30	3046	2919	3/23/15	3/4/17	Contig	SC	SAMEA1324738	GCA_001196165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/165/GCA_001196165.1_7748_4_63	-	USFL062
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87973	32.6	-	CSHU01	35	3025	2894	3/23/15	3/4/17	Contig	SC	SAMEA1324665	GCA_001196275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/275/GCA_001196275.1_7748_4_40	-	USFL039
"Salmonella enterica subsp. houtenae serovar 40:z4,z32:-"	1974322	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.67631	51.6	-	NBPE01	54	4701	4325	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902440	GCA_002106415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/415/GCA_002106415.1_ASM210641v1	-	NY_FSL S10-876
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.03226	50.6	-	LYCW01	234	5238	4904	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05017705	GCA_002189735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/735/GCA_002189735.1_ASM218973v1	-	ECOR55
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3907	65.6	-	MQJR01	35	4282	4096	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010468	GCA_001947135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/135/GCA_001947135.1_ASM194713v1	-	I0004549-7
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.16327	39.5	-	CQUL01	63	2399	2155	3/23/15	3/11/17	Scaffold	SC	SAMEA1025557	GCA_001199895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/895/GCA_001199895.1_6710_6_19	-	SMRU1363
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10622	39.6	-	CQYA01	57	2351	2093	3/22/15	3/11/17	Scaffold	SC	SAMEA1024590	GCA_001199915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/915/GCA_001199915.1_6730_3_15	-	SMRU615
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39352	65.6	-	MQFZ01	10	4265	4100	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010358	GCA_001947285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/285/GCA_001947285.1_ASM194728v1	-	M0005365-3
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.12967	50.4	-	LYCU01	276	5269	4935	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05017703	GCA_002189745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/745/GCA_002189745.1_ASM218974v1	-	ECOR53
"Salmonella enterica subsp. houtenae serovar 40:z4,z32:-"	1974322	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.67984	51.6	-	NBPL01	75	4715	4327	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902436	GCA_002106445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/445/GCA_002106445.1_ASM210644v1	-	NY_FSL S10-725
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88047	32.6	-	CSJJ01	29	3025	2900	3/22/15	3/4/17	Contig	SC	SAMEA1324680	GCA_001196415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/415/GCA_001196415.1_7738_3_55	-	USFL242
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87679	32.6	-	CSCH01	26	3011	2887	3/23/15	3/4/17	Contig	SC	SAMEA1324676	GCA_001196515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/515/GCA_001196515.1_7738_3_95	-	USFL281
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.71996	52.1	-	NBPP01	39	4771	4521	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902432	GCA_002106475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/475/GCA_002106475.1_ASM210647v1	-	NY_FSL S10-721
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.09222	50.4	-	LYCT01	504	5294	4893	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05017701	GCA_002189755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/755/GCA_002189755.1_ASM218975v1	-	ECOR52
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39069	65.6	-	MQGF01	33	4289	4105	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010364	GCA_001947345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/345/GCA_001947345.1_ASM194734v1	-	I0002138-1
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.98652	39.8	-	CRYB01	44	2177	1983	3/22/15	3/11/17	Scaffold	SC	SAMEA970278	GCA_001199995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/995/GCA_001199995.1_5242_8_11	-	BHN600
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.0735	39.7	-	CRBT01	85	2291	2077	3/23/15	3/11/17	Scaffold	SC	SAMEA1024873	GCA_001200035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/035/GCA_001200035.1_6731_1_2	-	SMRU986
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34667	65.5	-	MQGS01	76	4283	4080	1/11/17	3/14/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010377	GCA_001947425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/425/GCA_001947425.1_ASM194742v1	-	I0002794-1
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.02825	50.4	-	LYDK01	454	5162	4834	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05017706	GCA_002189765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/765/GCA_002189765.1_ASM218976v1	-	ECOR56
Salmonella enterica subsp. arizonae serovar 50:r:z	1974320	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.84157	51.7	-	NBQB01	117	4863	4486	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902437	GCA_002106495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/495/GCA_002106495.1_ASM210649v1	-	NY_FSL S10-1447
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.7537	32.7	-	CSSX01	50	2823	2669	3/22/15	3/4/17	Contig	SC	SAMEA1708703	GCA_001196555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/555/GCA_001196555.1_9061_8_76	-	BSAR858
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.7523	32.7	-	CSBD01	24	2811	2659	3/23/15	3/4/17	Contig	SC	SAMEA1463332	GCA_001196615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/615/GCA_001196615.1_7907_7_44	-	BSAR141_2
Salmonella enterica subsp. enterica serovar Holcomb	1974319	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.93115	52.1	-	NBPR01	68	5123	4809	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902430	GCA_002106505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/505/GCA_002106505.1_ASM210650v1	-	NY_FSL C7-650
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.70106	50	-	LYCX01	1440	5852	5409	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05017708	GCA_002189815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/815/GCA_002189815.1_ASM218981v1	-	ECOR57
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37316	65.6	-	MQGV01	15	4259	4093	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010380	GCA_001947435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/435/GCA_001947435.1_ASM194743v1	-	M0009405-3
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.18997	39.6	-	CROX01	64	2413	2184	3/23/15	3/10/17	Scaffold	SC	SAMEA1025363	GCA_001200075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/075/GCA_001200075.1_6755_6_20	-	SMRU1197
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.19092	39.7	-	CRTW01	51	2424	2183	3/23/15	3/11/17	Scaffold	SC	SAMEA1025276	GCA_001200135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/135/GCA_001200135.1_6805_5_12	-	SMRU1692
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34743	65.6	-	MQGZ01	6	4251	4082	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010384	GCA_001947445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/445/GCA_001947445.1_ASM194744v1	-	I0002711-5
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.4213	50.1	-	LYCY01	1613	5472	5092	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05017738	GCA_002189825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/825/GCA_002189825.1_ASM218982v1	-	ECOR58
Salmonella enterica subsp. enterica serovar Hartford	568095	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.78969	52.1	-	NBQA01	55	4850	4598	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902420	GCA_002106515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/515/GCA_002106515.1_ASM210651v1	-	NY_FSL C7-142
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.79842	32.7	-	CSPO01	35	2882	2749	3/23/15	3/4/17	Contig	SC	SAMEA1463309	GCA_001196655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/655/GCA_001196655.1_7907_7_72	-	BSAR176_2
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.8738	32.6	-	CSIO01	50	3013	2878	3/22/15	3/4/17	Contig	SC	SAMEA1324759	GCA_001196675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/675/GCA_001196675.1_7738_3_29	-	USFL216
"Salmonella enterica subsp. arizonae serovar 41:z4,z23:-"	1151166	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.70556	51.4	-	NBQC01	93	4797	4313	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902422	GCA_002106555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/555/GCA_002106555.1_ASM210655v1	-	NY_FSL S10-1446
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.04427	50.3	-	LYDA01	325	5202	4839	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05017740	GCA_002189835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/835/GCA_002189835.1_ASM218983v1	-	ECOR60
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34129	65.6	-	MQHD01	43	4264	4079	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010388	GCA_001947455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/455/GCA_001947455.1_ASM194745v1	-	I0001443-6
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12202	39.5	-	CRVQ01	45	2344	2118	3/23/15	3/4/17	Scaffold	SC	SAMEA1026250	GCA_001200335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/335/GCA_001200335.1_6805_7_2	-	SMRU1730
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.20758	39.7	-	CQWO01	129	2354	2164	3/23/15	3/4/17	Scaffold	SC	SAMEA1024957	GCA_001200455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/455/GCA_001200455.1_6714_7_2	-	SMRU746
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37977	65.6	-	MQHQ01	24	4270	4103	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010401	GCA_001947525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/525/GCA_001947525.1_ASM194752v1	-	I0002891-5
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.91519	50.6	-	LYDB01	379	5151	4799	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05017749	GCA_002189875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/875/GCA_002189875.1_ASM218987v1	-	ECOR61
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.71561	52.3	-	NBQD01	42	4789	4575	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902454	GCA_002106575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/575/GCA_002106575.1_ASM210657v1	-	NY_FSL S10-1020
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.80099	32.7	-	CSQR01	51	2913	2710	3/22/15	3/4/17	Contig	SC	SAMEA1463440	GCA_001196795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/795/GCA_001196795.1_7907_7_59	-	BSAR162_2
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87242	32.6	-	CSJL01	33	3015	2891	3/23/15	3/4/17	Contig	SC	SAMEA1324661	GCA_001196815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/815/GCA_001196815.1_7738_3_81	-	USFL267
"Salmonella enterica subsp. houtenae serovar 40:z4,z32:-"	1974322	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.67887	51.6	-	NBQI01	73	4710	4327	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902500	GCA_002106585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/585/GCA_002106585.1_ASM210658v1	-	NY_FSL S10-1821
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.45023	50.2	-	LYDL01	1093	5677	5258	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05017750	GCA_002189895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/895/GCA_002189895.1_ASM218989v1	-	ECOR62
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40034	65.6	-	MQLY01	32	4286	4097	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010411	GCA_001947615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/615/GCA_001947615.1_ASM194761v1	-	I0003933-4
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14552	39.5	-	CREK01	83	2374	2130	3/22/15	3/4/17	Scaffold	SC	SAMEA1024882	GCA_001200575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/575/GCA_001200575.1_6731_5_8	-	SMRU1088
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.21956	39.6	-	CRFT01	69	2469	2232	3/23/15	3/4/17	Scaffold	SC	SAMEA1025415	GCA_001200655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/655/GCA_001200655.1_6736_4_8	-	SMRU1208
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39882	65.6	-	MQIF01	53	4318	4103	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010430	GCA_001947765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/765/GCA_001947765.1_ASM194776v1	-	I0004083-7
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.10824	50.3	-	LYDM01	308	5278	4946	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05017752	GCA_002189905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/905/GCA_002189905.1_ASM218990v1	-	ECOR63
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.72092	52.1	-	NBQJ01	69	4775	4524	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902499	GCA_002106595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/595/GCA_002106595.1_ASM210659v1	-	NY_FSL S10-1820
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92448	32.7	-	CSIG01	29	3088	2961	3/23/15	3/4/17	Contig	SC	SAMEA1324618	GCA_001196895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/895/GCA_001196895.1_7738_3_37	-	USFL224
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.8844	32.6	-	CSIJ01	58	3027	2903	3/23/15	3/4/17	Contig	SC	SAMEA1324513	GCA_001197175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/175/GCA_001197175.1_7748_4_86	-	USFL084
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.68444	52.2	-	NBQM01	60	4739	4500	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902496	GCA_002106635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/635/GCA_002106635.1_ASM210663v1	-	NY_FSL S10-1811
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.94421	50.8	-	LYDD01	183	5051	4728	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05017773	GCA_002189935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/935/GCA_002189935.1_ASM218993v1	-	ECOR65
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39321	65.6	-	MQIY01	22	4271	4095	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010449	GCA_001947885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/885/GCA_001947885.1_ASM194788v1	-	I0004553-9
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.05936	39.5	-	CRXA01	65	2253	2005	3/23/15	3/6/17	Scaffold	SC	SAMEA1025508	GCA_001200695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/695/GCA_001200695.1_6807_2_20	-	SMRU1604
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.09373	39.4	-	CRMA01	90	2337	2104	3/22/15	3/4/17	Scaffold	SC	SAMEA1024595	GCA_001200755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/755/GCA_001200755.1_6755_2_19	-	SMRU811
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38026	65.6	-	MQJM01	15	4259	4092	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010463	GCA_001947965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/947/965/GCA_001947965.1_ASM194796v1	-	I0004903-6
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.16669	50.4	-	LYDC01	519	5382	5000	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05017771	GCA_002189945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/945/GCA_002189945.1_ASM218994v1	-	ECOR64
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.72478	52.1	-	NBQO01	56	4777	4535	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902494	GCA_002106655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/655/GCA_002106655.1_ASM210665v1	-	NY_FSL S10-1819
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87912	32.6	-	CSFG01	55	3027	2896	3/23/15	3/4/17	Contig	SC	SAMEA1324703	GCA_001197375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/375/GCA_001197375.1_7748_4_79	-	USFL077
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.80953	32.7	-	CSOQ01	63	2913	2772	3/23/15	6/19/17	Contig	SC	SAMEA1708834	GCA_001197515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/515/GCA_001197515.1_9061_8_83	-	BSAR865
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.69179	52.2	-	NBQP01	60	4735	4509	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902493	GCA_002106665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/665/GCA_002106665.1_ASM210666v1	-	NY_FSL S10-1816
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.93687	50.4	-	LYCZ01	750	5048	4709	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05017739	GCA_002189955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/955/GCA_002189955.1_ASM218995v1	-	ECOR59
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39129	65.6	-	MQJZ01	28	4280	4098	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010476	GCA_001948045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/045/GCA_001948045.1_ASM194804v1	-	I0005730-2
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11343	39.5	-	CRNT01	64	2304	2065	3/23/15	3/11/17	Scaffold	SC	SAMEA1025006	GCA_001200815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/815/GCA_001200815.1_6755_4_7	-	SMRU1135
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07831	39.6	-	CRKS01	62	2291	2021	3/23/15	3/11/17	Scaffold	SC	SAMEA1025377	GCA_001200855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/855/GCA_001200855.1_6753_4_19	-	SMRU1555
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41835	65.6	-	MQKC01	24	4307	4129	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010479	GCA_001948065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/065/GCA_001948065.1_ASM194806v1	-	M0025135-6
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.5491	49.9	-	LYDE01	1936	5528	5130	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05017774	GCA_002189985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/189/985/GCA_002189985.1_ASM218998v1	-	ECOR66
Salmonella enterica subsp. enterica serovar Seftenburg	1974324	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.84591	52	-	NBQQ01	64	4917	4672	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902492	GCA_002106675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/675/GCA_002106675.1_ASM210667v1	-	NY_FSL S10-1815
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92166	32.6	-	CSCJ01	38	3084	2955	3/22/15	3/4/17	Contig	SC	SAMEA1324522	GCA_001197595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/595/GCA_001197595.1_7748_4_60	-	USFL059
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.80063	32.7	-	CSSP01	39	2885	2751	3/22/15	3/4/17	Contig	SC	SAMEA1463428	GCA_001197715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/715/GCA_001197715.1_7907_7_69	-	BSAR172_2
Salmonella enterica subsp. enterica serovar Give	46626	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.81073	52.2	-	NBQR01	50	4929	4674	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902491	GCA_002106715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/715/GCA_002106715.1_ASM210671v1	-	NY_FSL S10-1814
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.75771	50.9	-	LYDN01	240	4889	4638	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05017776	GCA_002190005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/005/GCA_002190005.1_ASM219000v1	-	ECOR67
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38829	65.6	-	MQKG01	36	4279	4091	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010483	GCA_001948075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/075/GCA_001948075.1_ASM194807v1	-	I0005434-1
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.06625	39.5	-	CRKG01	82	2265	2046	3/23/15	3/10/17	Scaffold	SC	SAMEA1025637	GCA_001200895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/895/GCA_001200895.1_6753_3_23	-	SMRU1535
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.13221	39.5	-	CRJE01	48	2343	2127	3/23/15	3/11/17	Scaffold	SC	SAMEA1025157	GCA_001200915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/915/GCA_001200915.1_6753_2_12	-	SMRU1501
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38405	65.5	-	MQGA01	48	4289	4088	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010359	GCA_001948165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/165/GCA_001948165.1_ASM194816v1	-	I0000596-2
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.98691	50.7	-	LYDF01	238	5129	4819	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05017777	GCA_002190025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/025/GCA_002190025.1_ASM219002v1	-	ECOR68
Salmonella enterica subsp. enterica serovar Agona	58095	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.8144	51.9	-	NBQS01	110	4853	4612	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902490	GCA_002106735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/735/GCA_002106735.1_ASM210673v1	-	NY_FSL S10-1759
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88073	32.6	-	CSEY01	27	3024	2901	3/23/15	3/4/17	Contig	SC	SAMEA1324577	GCA_001197735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/735/GCA_001197735.1_7738_3_68	-	USFL255
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.77119	32.8	-	CSBF01	22	2857	2696	3/23/15	3/4/17	Contig	SC	SAMEA1463480	GCA_001197935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/935/GCA_001197935.1_7907_7_24	-	BSAR113_2
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.91162	52.2	-	NBQT01	59	5057	4819	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902488	GCA_002106745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/745/GCA_002106745.1_ASM210674v1	-	NY_FSL S10-1755
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.63063	50.7	-	LYDG01	138	4776	4501	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05017796	GCA_002190035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/035/GCA_002190035.1_ASM219003v1	-	ECOR69
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.34882	65.6	-	MQGN01	5	4238	4082	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010372	GCA_001948225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/225/GCA_001948225.1_ASM194822v1	-	I0002176-1
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.12992	39.6	-	CQWU01	163	2344	2109	3/23/15	3/11/17	Scaffold	SC	SAMEA1023959	GCA_001200955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/955/GCA_001200955.1_6714_8_13	-	SMRU565
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09483	39.7	-	CQVV01	60	2316	2088	3/22/15	3/10/17	Scaffold	SC	SAMEA1025215	GCA_001200975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/975/GCA_001200975.1_6710_8_11	-	SMRU1403
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39658	65.6	-	MQGW01	17	4290	4099	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010381	GCA_001948295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/295/GCA_001948295.1_ASM194829v1	-	I0002687-7
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.36665	50.2	-	LYDH01	870	5498	5117	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05017797	GCA_002190075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/075/GCA_002190075.1_ASM219007v1	-	ECOR70
Salmonella enterica subsp. enterica serovar Cerro	340188	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.65716	52.2	-	NBQU01	68	4775	4479	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902487	GCA_002106765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/765/GCA_002106765.1_ASM210676v1	-	NY_FSL S10-1742
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.91947	32.6	-	CSEG01	50	3089	2955	3/23/15	3/4/17	Contig	SC	SAMEA1466524	GCA_001198055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/055/GCA_001198055.1_7907_4_10	-	USFL104
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88151	32.6	-	CSDG01	31	3025	2901	3/23/15	3/4/17	Contig	SC	SAMEA1324693	GCA_001198135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/135/GCA_001198135.1_7738_4_62	-	USFL343
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.6837	52.2	-	NBQW01	48	4732	4505	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902485	GCA_002106795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/795/GCA_002106795.1_ASM210679v1	-	NY_FSL S10-1763
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.36193	50.3	-	LYDI01	1162	5430	5063	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05017798	GCA_002190085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/085/GCA_002190085.1_ASM219008v1	-	ECOR71
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37888	65.5	-	MQHL01	59	4305	4105	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010396	GCA_001948405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/405/GCA_001948405.1_ASM194840v1	-	I0000522-8
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.09102	39.5	-	CREE01	59	2286	2044	3/23/15	3/11/17	Scaffold	SC	SAMEA1024902	GCA_001200995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/995/GCA_001200995.1_6731_5_17	-	SMRU1097
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.20966	39.4	-	CREQ01	95	2422	2179	3/22/15	3/14/17	Scaffold	SC	SAMEA1025080	GCA_001201075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/075/GCA_001201075.1_6731_6_16	-	SMRU1120
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39271	65.6	-	MQHO01	18	4277	4104	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010399	GCA_001948445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/445/GCA_001948445.1_ASM194844v1	-	M0013712-6
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.94172	50.5	-	LYBJ01	848	5094	4755	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05003827	GCA_002190105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/105/GCA_002190105.1_ASM219010v1	-	ECOR01
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.97954	52.2	-	NBQX01	81	5159	4904	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902484	GCA_002106815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/815/GCA_002106815.1_ASM210681v1	-	NY_FSL S10-1752
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87751	32.6	-	CSEI01	30	3014	2887	3/22/15	3/4/17	Contig	SC	SAMEA1324749	GCA_001198155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/155/GCA_001198155.1_7738_3_79	-	USFL265
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.77617	32.6	-	CSCR01	30	2894	2773	3/22/15	3/4/17	Contig	SC	SAMEA1324674	GCA_001198335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/335/GCA_001198335.1_7738_4_64	-	USFL345
Salmonella enterica subsp. enterica serovar Give	46626	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.80895	52.2	-	NBQV01	43	4929	4670	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902486	GCA_002106825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/825/GCA_002106825.1_ASM210682v1	-	NY_FSL S10-1765
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.28509	50.6	-	LYBI01	573	5616	5192	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05003828	GCA_002190145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/145/GCA_002190145.1_ASM219014v1	-	ECOR02
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41518	65.6	-	MQLS01	23	4309	4118	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010405	GCA_001948465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/465/GCA_001948465.1_ASM194846v1	-	I0002881-6
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08312	39.8	-	CREP01	64	2273	2018	3/23/15	3/10/17	Scaffold	SC	SAMEA1024891	GCA_001201175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/175/GCA_001201175.1_6731_6_10	-	SMRU1114
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.1235	39.5	-	CQVC01	38	2351	2116	3/23/15	3/10/17	Scaffold	SC	SAMEA1025308	GCA_001201195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/195/GCA_001201195.1_6710_7_17	-	SMRU1385
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37983	65.6	-	MQHT01	8	4252	4076	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010418	GCA_001948545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/545/GCA_001948545.1_ASM194854v1	-	M0016824-6
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.84905	50.7	-	LYBH01	211	5076	4721	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05003829	GCA_002190155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/155/GCA_002190155.1_ASM219015v1	-	ECOR03
Salmonella enterica subsp. enterica serovar Agona	58095	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.79634	52	-	NBQY01	64	4838	4604	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902483	GCA_002106835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/835/GCA_002106835.1_ASM210683v1	-	NY_FSL S10-1750
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92609	32.6	-	CSCG01	50	3095	2963	3/23/15	3/4/17	Contig	SC	SAMEA1466502	GCA_001198415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/415/GCA_001198415.1_7907_4_92	-	USFL184
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.7949	32.7	-	CSII01	19	2953	2811	3/22/15	3/4/17	Contig	SC	SAMEA1324631	GCA_001198435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/435/GCA_001198435.1_7738_4_10	-	USFL292
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.92752	52.2	-	NBQZ01	91	5081	4830	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902482	GCA_002107155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/155/GCA_002107155.1_ASM210715v1	-	NY_FSL S10-1748
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.85332	50.1	-	LYBG01	1364	6128	5526	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05003830	GCA_002190165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/165/GCA_002190165.1_ASM219016v1	-	ECOR04
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38641	65.6	-	MQJQ01	62	4287	4095	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010467	GCA_001948925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/925/GCA_001948925.1_ASM194892v1	-	I0004727-9
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.21401	39.4	-	CQYL01	82	2445	2191	3/23/15	3/11/17	Scaffold	SC	SAMEA1025013	GCA_001201215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/215/GCA_001201215.1_6730_3_7	-	SMRU607
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.04676	39.6	-	CQWT01	125	2240	2059	3/23/15	3/11/17	Scaffold	SC	SAMEA1024802	GCA_001201235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/235/GCA_001201235.1_6714_7_24	-	SMRU768
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35076	65.6	-	MQJX01	14	4241	4075	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010474	GCA_001948945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/948/945/GCA_001948945.1_ASM194894v1	-	I0004748-5
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.16434	50.6	-	LYBF01	687	5431	5039	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05003833	GCA_002190205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/205/GCA_002190205.1_ASM219020v1	-	ECOR05
Salmonella enterica subsp. enterica serovar Cerro	340188	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.65846	52.2	-	NBRB01	75	4775	4478	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902480	GCA_002107175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/175/GCA_002107175.1_ASM210717v1	-	NY_FSL S10-1741
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.91303	32.6	-	CSFH01	53	3058	2932	3/23/15	3/4/17	Contig	SC	SAMEA1324758	GCA_001198695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/695/GCA_001198695.1_7748_4_64	-	USFL063
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.8806	32.6	-	CSGQ01	29	3025	2902	3/22/15	3/4/17	Contig	SC	SAMEA1324668	GCA_001198775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/775/GCA_001198775.1_7738_4_14	-	USFL296
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.84637	52	-	NBRA01	64	4926	4671	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902481	GCA_002107185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/185/GCA_002107185.1_ASM210718v1	-	NY_FSL S10-1745
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.6935	50.6	-	LYBE01	607	4806	4455	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05003834	GCA_002190225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/225/GCA_002190225.1_ASM219022v1	-	ECOR06
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.4096	65.6	-	MQKD01	30	4300	4133	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010480	GCA_001949005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/005/GCA_001949005.1_ASM194900v1	-	M0025221-4
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.0564	39.6	-	CRAG01	92	2240	1971	3/23/15	3/10/17	Scaffold	SC	SAMEA1024638	GCA_001201275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/275/GCA_001201275.1_6730_6_3	-	SMRU675
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07009	39.7	-	CRCX01	72	2293	2081	3/23/15	3/10/17	Scaffold	SC	SAMEA1024730	GCA_001201295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/295/GCA_001201295.1_6731_3_19	-	SMRU1051
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39254	65.6	-	MQKE01	14	4271	4100	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010481	GCA_001949015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/015/GCA_001949015.1_ASM194901v1	-	I0005796-3
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.55018	50.8	-	LYBD01	252	4650	4367	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05003835	GCA_002190245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/245/GCA_002190245.1_ASM219024v1	-	ECOR07
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.62508	52.3	-	NBRE01	96	4664	4410	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902477	GCA_002107195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/195/GCA_002107195.1_ASM210719v1	-	NY_FSL S10-1647
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87616	32.6	-	CSGU01	43	3020	2895	3/22/15	3/4/17	Contig	SC	SAMEA1466473	GCA_001199015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/015/GCA_001199015.1_7907_4_31	-	USFL124
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87973	32.6	-	CSBS01	51	3025	2893	3/23/15	3/4/17	Contig	SC	SAMEA1324528	GCA_001199135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/135/GCA_001199135.1_7748_4_30	-	USFL029
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.87565	52.1	-	NBRF01	42	5038	4723	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902476	GCA_002107235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/235/GCA_002107235.1_ASM210723v1	-	NY_FSL S10-1644
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.06989	50.4	-	LYBC01	618	5302	4900	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05003836	GCA_002190275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/275/GCA_002190275.1_ASM219027v1	-	ECOR08
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39448	65.6	-	MQKO01	11	4265	4098	1/11/17	3/15/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06010492	GCA_001949095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/949/095/GCA_001949095.1_ASM194909v1	-	M0018035-7
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.0772	39.6	-	CRDY01	87	2275	2062	3/23/15	3/11/17	Scaffold	SC	SAMEA1025005	GCA_001201355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/355/GCA_001201355.1_6731_5_10	-	SMRU1090
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.06257	39.6	-	CRMG01	80	2255	2038	3/22/15	3/11/17	Scaffold	SC	SAMEA1024628	GCA_001201415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/415/GCA_001201415.1_6755_2_22	-	SMRU814
Mycobacterium tuberculosis	1773	PRJNA341407	341407	Terrabacteria group	Actinobacteria	4.26002	65.4	-	MTGT01	165	4271	4042	2/13/17	3/15/17	Scaffold	California Department of Public Health	SAMN05721795	GCA_001997685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/685/GCA_001997685.1_ASM199768v1	-	CDPH_C58
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.2062	50.8	-	LYBB01	473	5601	5150	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05003837	GCA_002190285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/285/GCA_002190285.1_ASM219028v1	-	ECOR09
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.72152	52.1	-	NBRG01	46	4772	4524	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902475	GCA_002107255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/255/GCA_002107255.1_ASM210725v1	-	NY_FSL S10-1638
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87681	32.6	-	CSHT01	43	3023	2891	3/23/15	3/4/17	Contig	SC	SAMEA1324548	GCA_001199175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/175/GCA_001199175.1_7748_4_95	-	USFL093
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.82266	32.6	-	CSHD01	40	2963	2820	3/23/15	3/4/17	Contig	SC	SAMEA1324635	GCA_001199235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/235/GCA_001199235.1_7748_4_73	-	USFL071
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	5.03152	52.1	-	NBRI01	94	5222	4976	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902473	GCA_002107265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/265/GCA_002107265.1_ASM210726v1	-	NY_FSL S10-1632
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.01607	50.4	-	LYBA01	900	5095	4741	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05003850	GCA_002190295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/295/GCA_002190295.1_ASM219029v1	-	ECOR10
Mycobacterium tuberculosis	1773	PRJNA341407	341407	Terrabacteria group	Actinobacteria	4.2621	65.4	-	MTGU01	178	4254	4037	2/13/17	3/15/17	Scaffold	California Department of Public Health	SAMN05721796	GCA_001997745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/745/GCA_001997745.1_ASM199774v1	-	CDPH_C59
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.15303	39.5	-	CRDN01	86	2367	2144	3/23/15	3/11/17	Scaffold	SC	SAMEA1024814	GCA_001201435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/435/GCA_001201435.1_6731_4_19	-	SMRU1075
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12867	39.6	-	CRAH01	68	2336	2076	3/22/15	3/11/17	Scaffold	SC	SAMEA1024594	GCA_001201475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/475/GCA_001201475.1_6730_6_23	-	SMRU695
Mycobacterium tuberculosis	1773	PRJNA341407	341407	Terrabacteria group	Actinobacteria	4.23806	65.4	-	MTGV01	203	4270	4018	2/13/17	3/15/17	Scaffold	California Department of Public Health	SAMN05721797	GCA_001997765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/765/GCA_001997765.1_ASM199776v1	-	CDPH_C61
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.1486	50.6	-	LYAZ01	359	5433	5051	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05003853	GCA_002190305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/305/GCA_002190305.1_ASM219030v1	-	ECOR11
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.97741	52.2	-	NBRJ01	81	5152	4905	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902472	GCA_002107295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/295/GCA_002107295.1_ASM210729v1	-	NY_FSL S10-1630
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92062	32.6	-	CSIV01	34	3091	2961	3/23/15	3/4/17	Contig	SC	SAMEA1324695	GCA_001199375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/375/GCA_001199375.1_7738_4_43	-	USFL324
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88003	32.6	-	CSGE01	29	3021	2893	3/22/15	3/4/17	Contig	SC	SAMEA1324761	GCA_001199615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/615/GCA_001199615.1_7738_4_66	-	USFL347
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.7325	52.2	-	NBRH01	55	4790	4563	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902474	GCA_002107305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/305/GCA_002107305.1_ASM210730v1	-	NY_FSL S10-1636
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.438	50.4	-	LYAY01	1260	5686	5266	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05003856	GCA_002190355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/355/GCA_002190355.1_ASM219035v1	-	ECOR12
Mycobacterium tuberculosis	1773	PRJNA341407	341407	Terrabacteria group	Actinobacteria	4.08086	65.5	-	MTGW01	719	4261	3705	2/13/17	3/15/17	Scaffold	California Department of Public Health	SAMN05721798	GCA_001997825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/825/GCA_001997825.1_ASM199782v1	-	CDPH_C65
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12012	39.4	-	CRDS01	70	2312	2081	3/23/15	3/11/17	Scaffold	SC	SAMEA1024772	GCA_001201515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/515/GCA_001201515.1_6731_4_22	-	SMRU1078
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.06875	39.6	-	CRAQ01	70	2294	2065	3/23/15	3/11/17	Scaffold	SC	SAMEA1024575	GCA_001201575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/575/GCA_001201575.1_6730_7_12	-	SMRU708
Mycobacterium tuberculosis	1773	PRJNA341407	341407	Terrabacteria group	Actinobacteria	4.24085	65.4	-	MTGR01	181	4260	4021	2/13/17	3/15/17	Scaffold	California Department of Public Health	SAMN05721793	GCA_001997855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/855/GCA_001997855.1_ASM199785v1	-	CDPH_C56
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.55984	50.7	-	LYAX01	389	4697	4384	6/12/17	6/15/17	Contig	Max von Pettenkofer-Institute	SAMN05003858	GCA_002190365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/365/GCA_002190365.1_ASM219036v1	-	ECOR13
"Salmonella enterica subsp. enterica serovar 6,8:i:-"	1974318	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.83378	52.1	-	NBRM01	54	4880	4630	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902469	GCA_002107335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/335/GCA_002107335.1_ASM210733v1	-	NY_FSL S10-1556
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87872	32.7	-	CSIB01	45	3058	2919	3/22/15	3/4/17	Contig	SC	SAMEA1324627	GCA_001199655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/655/GCA_001199655.1_7748_4_53	-	USFL052
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.83949	32.6	-	CSEV01	36	2984	2856	3/22/15	3/4/17	Contig	SC	SAMEA1324512	GCA_001199675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/675/GCA_001199675.1_7738_3_1	-	USFL189
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.87749	52.1	-	NBRL01	49	5034	4722	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902470	GCA_002107355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/355/GCA_002107355.1_ASM210735v1	-	NY_FSL S10-1623
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.39195	50.3	-	LYAW01	1094	5595	5166	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05003863	GCA_002190375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/375/GCA_002190375.1_ASM219037v1	-	ECOR14
Mycobacterium tuberculosis	1773	PRJNA341407	341407	Terrabacteria group	Actinobacteria	4.27508	65.5	-	MTGY01	206	4274	4003	2/13/17	3/15/17	Scaffold	California Department of Public Health	SAMN05721800	GCA_001997905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/905/GCA_001997905.1_ASM199790v1	-	CDPH_C68
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.128	39.3	-	CRKA01	54	2321	2092	3/23/15	3/11/17	Scaffold	SC	SAMEA1025599	GCA_001201675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/675/GCA_001201675.1_6753_3_17	-	SMRU1529
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.15359	39.5	-	CRLT01	60	2392	2121	3/23/15	3/4/17	Scaffold	SC	SAMEA1024980	GCA_001201735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/735/GCA_001201735.1_6755_1_4	-	SMRU772
Mycobacterium tuberculosis	1773	PRJNA341407	341407	Terrabacteria group	Actinobacteria	4.30104	65.5	-	MTGZ01	201	4273	4045	2/13/17	3/15/17	Scaffold	California Department of Public Health	SAMN05721801	GCA_001997915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/915/GCA_001997915.1_ASM199791v1	-	CDPH_C69
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.93335	50.7	-	LYAV01	336	5105	4794	6/12/17	6/15/17	Contig	Max von Pettenkofer-Institute	SAMN05003867	GCA_002190395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/395/GCA_002190395.1_ASM219039v1	-	ECOR15
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.98756	52.1	-	NBRO01	97	5168	4915	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902467	GCA_002107375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/375/GCA_002107375.1_ASM210737v1	-	NY_FSL S10-1544
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92642	32.6	-	CSDY01	48	3093	2961	3/23/15	3/4/17	Contig	SC	SAMEA1324724	GCA_001199755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/755/GCA_001199755.1_7738_3_27	-	USFL214
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.96719	32.6	-	CSBG01	34	3133	3002	3/23/15	3/4/17	Contig	SC	SAMEA1324706	GCA_001199775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/775/GCA_001199775.1_7738_3_93	-	USFL279
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.71987	52.2	-	NBRN01	45	4777	4548	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902468	GCA_002107385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/385/GCA_002107385.1_ASM210738v1	-	NY_FSL S10-1548
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.60969	50.8	-	LYAU01	148	4732	4409	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05004025	GCA_002190435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/435/GCA_002190435.1_ASM219043v1	-	ECOR16
Mycobacterium tuberculosis	1773	PRJNA341407	341407	Terrabacteria group	Actinobacteria	4.23648	65.4	-	MTGS01	239	4275	3997	2/13/17	3/15/17	Scaffold	California Department of Public Health	SAMN05721794	GCA_001998065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/065/GCA_001998065.1_ASM199806v1	-	CDPH_C57
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14182	39.5	-	CRBF01	82	2377	2115	3/22/15	3/6/17	Scaffold	SC	SAMEA1025041	GCA_001201775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/775/GCA_001201775.1_6730_8_3	-	SMRU723
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.16656	39.5	-	CRFE01	58	2403	2173	3/23/15	3/4/17	Scaffold	SC	SAMEA1025517	GCA_001201815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/815/GCA_001201815.1_6736_4_15	-	SMRU1215
Mycobacterium tuberculosis	1773	PRJNA341407	341407	Terrabacteria group	Actinobacteria	4.28015	65.5	-	MTGX01	160	4259	4040	2/13/17	3/15/17	Scaffold	California Department of Public Health	SAMN05721799	GCA_001999445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/445/GCA_001999445.1_ASM199944v1	-	CDPH_C67
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.56797	50.7	-	LYAT01	379	4681	4358	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05004027	GCA_002190455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/455/GCA_002190455.1_ASM219045v1	-	ECOR17
Salmonella enterica subsp. enterica serovar Give	46626	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.7751	52.2	-	NBRR01	57	4864	4610	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902464	GCA_002107415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/415/GCA_002107415.1_ASM210741v1	-	NY_FSL S10-1421
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.77555	32.7	-	CSNI01	40	2861	2728	3/23/15	3/4/17	Contig	SC	SAMEA1033422	GCA_001199875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/875/GCA_001199875.1_7068_5_17	-	BSAR77
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88143	32.6	-	CSHP01	51	3027	2899	3/23/15	3/4/17	Contig	SC	SAMEA1324637	GCA_001200155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/155/GCA_001200155.1_7748_4_54	-	USFL053
Salmonella enterica subsp. enterica serovar Cerro	340188	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.67669	52.2	-	NBRT01	68	4807	4508	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902463	GCA_002107455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/455/GCA_002107455.1_ASM210745v1	-	NY_FSL S10-1411
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.60724	50.7	-	LYAS01	308	4715	4382	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05004036	GCA_002190465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/465/GCA_002190465.1_ASM219046v1	-	ECOR18
Mycobacterium tuberculosis	1773	PRJNA358292	358292	Terrabacteria group	Actinobacteria	4.31093	65.4	-	MSLV01	100	4277	4039	2/15/17	7/3/17	Scaffold	Instituto de Biotecnologia	SAMN06169722	GCA_002000185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/185/GCA_002000185.1_ASM200018v1	28223967	ISOLATE48
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.14435	39.7	-	CRHP01	48	2312	2045	3/22/15	3/15/17	Scaffold	SC	SAMEA1025648	GCA_001201835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/835/GCA_001201835.1_6736_7_7	-	SMRU1279
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12992	39.6	-	CRIA01	48	2362	2130	3/22/15	3/4/17	Scaffold	SC	SAMEA1025313	GCA_001201855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/855/GCA_001201855.1_6736_8_17	-	SMRU1313
Mycobacterium tuberculosis	1773	PRJNA358287	358287	Terrabacteria group	Actinobacteria	4.29765	65.3	-	MSLU01	117	4310	4043	2/15/17	7/3/17	Scaffold	Instituto de Biotecnologia	SAMN06169721	GCA_002000215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/000/215/GCA_002000215.1_ASM200021v1	28223967	ISOLATE46
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.55321	50.8	-	LYAR01	365	4656	4343	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05004066	GCA_002190475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/475/GCA_002190475.1_ASM219047v1	-	ECOR19
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.83669	52.2	-	NBRX01	65	4966	4714	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902455	GCA_002107465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/465/GCA_002107465.1_ASM210746v1	-	NY_FSL S10-1060
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.82195	32.6	-	CSHA01	27	2964	2848	3/23/15	3/4/17	Contig	SC	SAMEA1324770	GCA_001200275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/275/GCA_001200275.1_7738_3_59	-	USFL246
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.83697	32.6	-	CSFS01	28	2948	2824	3/22/15	3/4/17	Contig	SC	SAMEA1324561	GCA_001200375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/375/GCA_001200375.1_7738_3_5	-	USFL193
Salmonella enterica subsp. enterica serovar Litchfield	486998	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.75032	52.2	-	NBRY01	54	4847	4623	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902453	GCA_002107495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/495/GCA_002107495.1_ASM210749v1	-	NY_FSL S10-955
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.50455	50.8	-	LYAQ01	426	4675	4300	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05004248	GCA_002190515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/515/GCA_002190515.1_ASM219051v1	-	ECOR20
Mycobacterium tuberculosis	1773	PRJNA379996	379996	Terrabacteria group	Actinobacteria	4.35649	65.4	-	NARI01	223	4401	4107	4/12/17	4/17/17	Scaffold	"MedBiotech laboratory, faculty of medicine and pharmacy, rabat/ Mohamed V university rabat"	SAMN06624815	GCA_002087305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/305/GCA_002087305.1_ASM208730v1	-	MTB9
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10401	39.7	-	CRPR01	71	2335	2124	3/23/15	3/4/17	Scaffold	SC	SAMEA1024705	GCA_001201955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/955/GCA_001201955.1_6775_1_22	-	SMRU838
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.1313	39.6	-	CRXD01	88	2313	2043	3/23/15	3/11/17	Scaffold	SC	SAMEA1025493	GCA_001202115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/115/GCA_001202115.1_6807_2_21	-	SMRU1605
Mycobacterium tuberculosis	1773	PRJNA379996	379996	Terrabacteria group	Actinobacteria	4.3517	65.5	-	NARJ01	202	4392	4103	4/12/17	4/17/17	Scaffold	"MedBiotech laboratory, faculty of medicine and pharmacy, rabat/ Mohamed V university rabat"	SAMN06624814	GCA_002087345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/345/GCA_002087345.1_ASM208734v1	-	MTB8
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.5318	50.7	-	LYAO01	229	4646	4355	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05004273	GCA_002190535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/535/GCA_002190535.1_ASM219053v1	-	ECOR22
Salmonella enterica subsp. diarizonae serovar Rough:r:z	1974321	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	5.41154	51.3	-	NBRZ01	131	5393	4945	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902452	GCA_002107505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/505/GCA_002107505.1_ASM210750v1	-	NY_FSL S10-1123
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87126	32.6	-	CSFM01	36	3016	2889	3/23/15	3/4/17	Contig	SC	SAMEA1324602	GCA_001200515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/515/GCA_001200515.1_7738_4_44	-	USFL325
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92099	32.6	-	CSFT01	35	3087	2951	3/23/15	3/4/17	Contig	SC	SAMEA1324757	GCA_001200595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/595/GCA_001200595.1_7738_4_38	-	USFL319
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.62808	52.3	-	NBRC01	57	4667	4424	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902479	GCA_002107535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/535/GCA_002107535.1_ASM210753v1	-	NY_FSL S10-1666
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.53884	50.8	-	LYAP01	343	4744	4351	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05004259	GCA_002190545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/545/GCA_002190545.1_ASM219054v1	-	ECOR21
Mycobacterium tuberculosis	1773	PRJNA379996	379996	Terrabacteria group	Actinobacteria	4.2914	65.3	-	NARL01	238	4397	4051	4/12/17	4/17/17	Scaffold	"MedBiotech laboratory, faculty of medicine and pharmacy, rabat/ Mohamed V university rabat"	SAMN06624812	GCA_002087385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/385/GCA_002087385.1_ASM208738v1	-	MTB2
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08583	39.6	-	CRIQ01	67	2324	2091	3/23/15	3/10/17	Scaffold	SC	SAMEA1025156	GCA_001202195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/195/GCA_001202195.1_6753_1_13	-	SMRU1477
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14954	39.6	-	CRLI01	53	2341	2050	3/22/15	3/11/17	Scaffold	SC	SAMEA1025046	GCA_001202235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/235/GCA_001202235.1_6755_1_14	-	SMRU782
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39363	65.6	-	MRDT01	7	4265	4095	5/11/17	5/22/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06094073	GCA_002128825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/825/GCA_002128825.1_ASM212882v1	-	02-R0123
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.89375	50.7	-	LYAN01	351	5078	4709	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05004288	GCA_002190555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/555/GCA_002190555.1_ASM219055v1	-	ECOR23
Salmonella enterica subsp. enterica serovar Give	46626	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.84429	52.1	-	NBRD01	49	4972	4715	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902478	GCA_002107545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/545/GCA_002107545.1_ASM210754v1	-	NY_FSL S10-1649
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.85776	32.6	-	CSCQ01	23	3026	2875	3/22/15	3/4/17	Contig	SC	SAMEA1324599	GCA_001200715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/715/GCA_001200715.1_7748_4_90	-	USFL088
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.85849	32.6	-	CSHW01	23	2999	2874	3/22/15	3/5/17	Contig	SC	SAMEA1710079	GCA_001200875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/875/GCA_001200875.1_9266_1_13	-	FL367
Salmonella enterica subsp. diarizonae serovar Rough:r:z	1974321	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.84388	51.7	-	NBRK01	114	4852	4483	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902471	GCA_002107575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/575/GCA_002107575.1_ASM210757v1	-	NY_FSL S10-1628
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.28174	50.7	-	LYAM01	404	5551	5126	6/12/17	6/15/17	Contig	Max von Pettenkofer-Institute	SAMN05004300	GCA_002190595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/595/GCA_002190595.1_ASM219059v1	-	ECOR24
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3747	65.6	-	MRDX01	17	4259	4090	5/11/17	5/23/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06094077	GCA_002128855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/855/GCA_002128855.1_ASM212885v1	-	00-R1169
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12144	39.6	-	CRGT01	48	2388	2099	3/22/15	3/14/17	Scaffold	SC	SAMEA1025197	GCA_001202255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/255/GCA_001202255.1_6736_6_5	-	SMRU1253
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.09002	39.6	-	CREW01	67	2294	2065	3/22/15	3/11/17	Scaffold	SC	SAMEA1024742	GCA_001202275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/275/GCA_001202275.1_6731_6_2	-	SMRU1106
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38118	65.6	-	MREG01	42	4284	4101	5/11/17	5/23/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06094086	GCA_002128925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/925/GCA_002128925.1_ASM212892v1	-	02-R0236
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.77252	50.5	-	LYAL01	309	4966	4664	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05004301	GCA_002190605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/605/GCA_002190605.1_ASM219060v1	-	ECOR25
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.72419	52.1	-	NBRP01	51	4776	4530	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902466	GCA_002107585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/585/GCA_002107585.1_ASM210758v1	-	NY_FSL S10-1570
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87976	32.6	-	CSHO01	34	3018	2898	3/22/15	3/4/17	Contig	SC	SAMEA1324766	GCA_001201135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/135/GCA_001201135.1_7748_4_37	-	USFL036
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.86591	32.6	-	CSBL01	34	3010	2881	3/23/15	3/4/17	Contig	SC	SAMEA1324733	GCA_001201255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/255/GCA_001201255.1_7738_3_13	-	USFL201
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.71814	52.2	-	NBRU01	54	4763	4539	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902458	GCA_002107615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/615/GCA_002107615.1_ASM210761v1	-	NY_FSL S10-1031
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.69699	50.6	-	LYAK01	319	4797	4554	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05004314	GCA_002190625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/625/GCA_002190625.1_ASM219062v1	-	ECOR26
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38642	65.6	-	MREN01	18	4269	4080	5/11/17	5/23/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06094093	GCA_002128985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/128/985/GCA_002128985.1_ASM212898v1	-	00-R1562
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07609	39.6	-	CRVF01	92	2269	2028	3/23/15	3/10/17	Scaffold	SC	SAMEA1025333	GCA_001202315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/315/GCA_001202315.1_6805_6_9	-	SMRU1713
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.1267	39.8	-	CRTJ01	60	2364	2122	3/23/15	3/11/17	Scaffold	SC	SAMEA1025278	GCA_001202335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/335/GCA_001202335.1_6805_4_19	-	SMRU1675
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39283	65.6	-	MREO01	21	4279	4117	5/11/17	5/23/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06094094	GCA_002129015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/015/GCA_002129015.1_ASM212901v1	-	01-R0270
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.8796	50.4	-	LYAJ01	291	5057	4791	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05004331	GCA_002190645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/645/GCA_002190645.1_ASM219064v1	-	ECOR27
Salmonella enterica subsp. enterica serovar Rubislaw	598	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.94599	52	-	NBRW01	42	5066	4783	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902456	GCA_002107635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/635/GCA_002107635.1_ASM210763v1	-	NY_FSL S10-1000
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88376	32.6	-	CSBT01	35	3025	2902	3/22/15	3/4/17	Contig	SC	SAMEA1324634	GCA_001201455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/455/GCA_001201455.1_7738_4_57	-	USFL338
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.94329	32.6	-	CSJP01	55	3118	2978	3/23/15	3/4/17	Contig	SC	SAMEA1466505	GCA_001201555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/555/GCA_001201555.1_7907_4_78	-	USFL170
Salmonella enterica subsp. enterica serovar Saphra	1967600	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	5.00219	52	-	NBRV01	92	5232	4909	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902457	GCA_002108105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/105/GCA_002108105.1_ASM210810v1	-	NY_FSL S10-1092
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.94087	50.7	-	LYAI01	322	5090	4801	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05004357	GCA_002190675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/675/GCA_002190675.1_ASM219067v1	-	ECOR28
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38463	65.6	-	MRFJ01	9	4269	4098	5/11/17	5/23/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06094115	GCA_002129175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/175/GCA_002129175.1_ASM212917v1	-	02-R0358
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.11512	39.4	-	CRPB01	56	2350	2135	3/23/15	3/14/17	Scaffold	SC	SAMEA1025454	GCA_001202355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/355/GCA_001202355.1_6755_6_4	-	SMRU1180
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.98797	39.8	-	CRYM01	46	2201	1996	3/23/15	3/4/17	Scaffold	SC	SAMEA970300	GCA_001202475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/475/GCA_001202475.1_5242_8_5	-	BHN594
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3857	65.6	-	MRFR01	38	4278	4077	5/11/17	5/23/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06094128	GCA_002129215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/215/GCA_002129215.1_ASM212921v1	-	M0000670-1
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.95237	50.6	-	LYAH01	301	5136	4834	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05004371	GCA_002190685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/685/GCA_002190685.1_ASM219068v1	-	ECOR29
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.73416	52.2	-	NBRQ01	52	4794	4560	4/24/17	4/26/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902465	GCA_002108215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/215/GCA_002108215.1_ASM210821v1	-	NY_FSL S10-1568
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92349	32.7	-	CSJE01	49	3095	2964	3/23/15	3/4/17	Contig	SC	SAMEA1324755	GCA_001201695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/695/GCA_001201695.1_7748_4_82	-	USFL080
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.94097	32.6	-	CSHI01	57	3123	2986	3/23/15	3/4/17	Contig	SC	SAMEA1324669	GCA_001201715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/715/GCA_001201715.1_7738_4_40	-	USFL321
Salmonella enterica subsp. enterica serovar Newport str. SHSN014	1324323	PRJNA197523	197523	Proteobacteria	Gammaproteobacteria	4.72289	52.1	-	ASXB01	190	4763	4551	4/24/17	4/26/17	Contig	"University of Maryland, College Park"	SAMN06677846	GCA_002108925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/108/925/GCA_002108925.1_S_Newport_SHSN014_v01	-	SHSN014
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.32712	50.1	-	LYAG01	1416	5396	5032	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05004391	GCA_002190705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/705/GCA_002190705.1_ASM219070v1	-	ECOR30
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40876	65.6	-	MRGU01	4	4284	4107	5/11/17	5/23/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06094157	GCA_002129485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/485/GCA_002129485.1_ASM212948v1	-	M0004794-5
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.98511	39.7	-	CRXT01	49	2196	1989	3/23/15	3/4/17	Scaffold	SC	SAMEA970218	GCA_001202615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/615/GCA_001202615.1_5242_6_3	-	BHN570
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10488	39.6	-	CRVU01	51	2299	2041	3/22/15	3/4/17	Scaffold	SC	SAMEA1026210	GCA_001202735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/735/GCA_001202735.1_6805_7_23	-	SMRU1752
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.3964	65.6	-	MRHT01	10	4280	4105	5/11/17	5/23/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06094182	GCA_002129695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/695/GCA_002129695.1_ASM212969v1	-	M0021852-0
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.30163	50.6	-	LYAF01	165	5433	5096	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05004435	GCA_002190715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/715/GCA_002190715.1_ASM219071v1	-	ECOR31
Salmonella enterica subsp. enterica serovar Newport str. SHSN004	1324338	PRJNA197512	197512	Proteobacteria	Gammaproteobacteria	4.693	52	-	AROM01	252	4755	4516	4/25/17	4/27/17	Contig	"University of Maryland, College Park"	SAMN06677847	GCA_002109045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/045/GCA_002109045.1_S_Newport_SHSN004_v01	-	SHSN004
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.77253	32.7	-	CSRY01	52	2866	2718	3/23/15	3/4/17	Contig	SC	SAMEA1708843	GCA_001201795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/795/GCA_001201795.1_8987_2_14	-	BSAR748
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87909	32.6	-	CSFQ01	53	3033	2891	3/22/15	3/4/17	Contig	SC	SAMEA1466513	GCA_001202095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/095/GCA_001202095.1_7907_4_27	-	USFL120
Salmonella enterica subsp. enterica serovar Newport str. SHSN010	1324319	PRJNA197518	197518	Proteobacteria	Gammaproteobacteria	5.07641	51.8	-	AROS01	242	5193	4970	4/25/17	4/27/17	Contig	"University of Maryland, College Park"	SAMN06677857	GCA_002109055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/055/GCA_002109055.1_S_Newport_SHSN010_v01	-	SHSN010
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.83743	50.7	-	LYAE01	362	4972	4677	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05004556	GCA_002190745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/745/GCA_002190745.1_ASM219074v1	-	ECOR32
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39787	65.6	-	MRFG01	10	4272	4104	5/11/17	5/23/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06094112	GCA_002129815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/815/GCA_002129815.1_ASM212981v1	-	02-R0258
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.18218	39.6	-	CRIO01	64	2420	2165	3/23/15	3/4/17	Scaffold	SC	SAMEA1025245	GCA_001202755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/755/GCA_001202755.1_6753_1_10	-	SMRU1474
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.11886	39.5	-	CRIN01	73	2357	2133	3/22/15	3/4/17	Scaffold	SC	SAMEA1025124	GCA_001202775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/775/GCA_001202775.1_6753_1_11	-	SMRU1475
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39259	65.6	-	MRDY01	26	4272	4092	5/11/17	5/22/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06094078	GCA_002129945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/945/GCA_002129945.1_ASM212994v1	-	01-R1387
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.82148	50.7	-	LYAD01	353	4942	4663	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05004557	GCA_002190775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/775/GCA_002190775.1_ASM219077v1	-	ECOR33
Salmonella enterica subsp. enterica serovar Newport str. SHSN003	1324337	PRJNA197511	197511	Proteobacteria	Gammaproteobacteria	4.79269	52.1	-	AROL01	149	4852	4665	4/25/17	4/27/17	Contig	"University of Maryland, College Park"	SAMN06677848	GCA_002109075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/075/GCA_002109075.1_S_Newport_SHSN003_v01	-	SHSN003
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88033	32.6	-	CSED01	30	3026	2902	3/22/15	3/4/17	Contig	SC	SAMEA1324686	GCA_001202175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/175/GCA_001202175.1_7738_4_13	-	USFL295
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.84434	32.6	-	CSJY01	40	2967	2829	3/23/15	3/4/17	Contig	SC	SAMEA1324653	GCA_001202395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/395/GCA_001202395.1_7738_3_21	-	USFL208
Salmonella enterica subsp. enterica serovar Newport str. SHSN008	1324341	PRJNA197515	197515	Proteobacteria	Gammaproteobacteria	4.79633	52	-	AROP01	193	4790	4590	4/25/17	4/27/17	Contig	"University of Maryland, College Park"	SAMN06677860	GCA_002109105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/105/GCA_002109105.1_S_Newport_SHSN008_v01	-	SHSN008
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.91556	50.7	-	LYAC01	432	5078	4774	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05004606	GCA_002190785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/785/GCA_002190785.1_ASM219078v1	-	ECOR34
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40298	65.6	-	MRDZ01	30	4294	4106	5/11/17	5/23/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06094079	GCA_002129955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/955/GCA_002129955.1_ASM212995v1	-	00-R1152
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.2162	39.6	-	CRXR01	95	2466	2211	3/22/15	3/4/17	Scaffold	SC	SAMEA1408285	GCA_001202795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/795/GCA_001202795.1_7444_8_81	-	0409+02133
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12358	39.6	-	CREA01	63	2322	2100	3/23/15	3/4/17	Scaffold	SC	SAMEA1024964	GCA_001202815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/815/GCA_001202815.1_6731_5_12	-	SMRU1092
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37329	65.6	-	MREA01	15	4254	4085	5/11/17	5/23/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06094080	GCA_002129985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/129/985/GCA_002129985.1_ASM212998v1	-	02-R0195
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.16868	50.5	-	LYAB01	618	5447	5034	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05004608	GCA_002190815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/815/GCA_002190815.1_ASM219081v1	-	ECOR35
Salmonella enterica subsp. enterica serovar Newport str. SHSN012	1324321	PRJNA197521	197521	Proteobacteria	Gammaproteobacteria	4.67061	52	-	AROU01	747	4816	4482	4/25/17	4/27/17	Contig	"University of Maryland, College Park"	SAMN06677855	GCA_002109125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/125/GCA_002109125.1_S_Newport_SHSN012_v01	-	SHSN012
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.8843	32.6	-	CSEP01	49	3025	2892	3/23/15	3/4/17	Contig	SC	SAMEA1466534	GCA_001202535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/535/GCA_001202535.1_7907_4_83	-	USFL175
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.90829	32.7	-	CSEQ01	52	3073	2943	3/23/15	3/4/17	Contig	SC	SAMEA1324547	GCA_001203135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/135/GCA_001203135.1_7748_4_29	-	USFL028
Salmonella enterica subsp. enterica serovar Newport str. SHSN013	1324322	PRJNA197522	197522	Proteobacteria	Gammaproteobacteria	4.68933	52.1	-	AROV01	202	4730	4527	4/25/17	4/27/17	Contig	"University of Maryland, College Park"	SAMN06677854	GCA_002109135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/135/GCA_002109135.1_S_Newport_SHSN013_v01	-	SHSN013
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.28108	50.4	-	LYBO01	644	5631	5208	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05004646	GCA_002190825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/825/GCA_002190825.1_ASM219082v1	-	ECOR36
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39293	65.6	-	MRED01	13	4275	4092	5/11/17	5/22/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06094083	GCA_002130025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/025/GCA_002130025.1_ASM213002v1	-	01-R0186
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11098	39.6	-	CRLS01	70	2367	2118	3/23/15	3/4/17	Scaffold	SC	SAMEA1024992	GCA_001202855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/855/GCA_001202855.1_6755_1_6	-	SMRU774
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.15447	39.6	-	CQXH01	49	2352	2113	3/23/15	3/6/17	Scaffold	SC	SAMEA1025090	GCA_001202915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/915/GCA_001202915.1_6730_1_16	-	SMRU592
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.35268	65.6	-	MREH01	12	4241	4069	5/11/17	5/23/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06094087	GCA_002130075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/075/GCA_002130075.1_ASM213007v1	-	99-R887
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.87263	49.9	-	LXZZ01	1552	6118	5594	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05004757	GCA_002190865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/865/GCA_002190865.1_ASM219086v1	-	ECOR38
Salmonella enterica subsp. enterica serovar Newport str. SHSN001	1324335	PRJNA197509	197509	Proteobacteria	Gammaproteobacteria	4.73361	52.2	-	AROJ01	196	4810	4611	4/25/17	4/27/17	Contig	"University of Maryland, College Park"	SAMN06677850	GCA_002109145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/145/GCA_002109145.1_S_Newport_SHSN001_v01	-	SHSN001
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.73951	32.6	-	CSGM01	33	2828	2713	3/23/15	3/4/17	Contig	SC	SAMEA1466540	GCA_001203175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/175/GCA_001203175.1_7907_4_25	-	USFL118
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87444	32.6	-	CSDT01	30	3018	2894	3/22/15	3/4/17	Contig	SC	SAMEA1466466	GCA_001203255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/255/GCA_001203255.1_7907_4_60	-	USFL153
Salmonella enterica subsp. enterica serovar Newport str. SHSN002	1324336	PRJNA197510	197510	Proteobacteria	Gammaproteobacteria	4.8961	51.9	-	AROK01	184	4990	4784	4/25/17	4/27/17	Contig	"University of Maryland, College Park"	SAMN06677849	GCA_002109185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/185/GCA_002109185.1_S_Newport_SHSN002_v01	-	SHSN002
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.55877	50.1	-	LYCJ01	1130	5755	5312	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05007378	GCA_002190875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/875/GCA_002190875.1_ASM219087v1	-	ECOR39
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39578	65.6	-	MREI01	14	4269	4094	5/11/17	5/23/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06094088	GCA_002130115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/115/GCA_002130115.1_ASM213011v1	-	01-R0224
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.13105	39.5	-	CQZI01	35	2372	2124	3/23/15	3/4/17	Scaffold	SC	SAMEA1024743	GCA_001202935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/935/GCA_001202935.1_6730_5_15	-	SMRU663
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.1784	39.5	-	CRBE01	109	2445	2194	3/23/15	3/4/17	Scaffold	SC	SAMEA1025014	GCA_001202955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/955/GCA_001202955.1_6730_8_16	-	SMRU736
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39529	65.6	-	MRER01	9	4286	4103	5/11/17	5/23/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06094097	GCA_002130185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/185/GCA_002130185.1_ASM213018v1	-	01-R0446
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.26285	50.4	-	LYCH01	436	5451	5065	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05007541	GCA_002190885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/885/GCA_002190885.1_ASM219088v1	-	ECOR41
Salmonella enterica subsp. enterica serovar Newport str. SHSN005	1324339	PRJNA197513	197513	Proteobacteria	Gammaproteobacteria	4.8608	52.1	-	ARON01	138	4896	4694	4/25/17	4/27/17	Contig	"University of Maryland, College Park"	SAMN06677862	GCA_002109205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/205/GCA_002109205.1_S_Newport_SHSN005_v01	-	SHSN005
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88006	32.6	-	CSEK01	48	3027	2891	3/23/15	3/4/17	Contig	SC	SAMEA1324514	GCA_001203315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/315/GCA_001203315.1_7748_4_9	-	USFL009
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.86074	32.6	-	CSHF01	31	3000	2878	3/22/15	3/4/17	Contig	SC	SAMEA1324708	GCA_001203535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/535/GCA_001203535.1_7738_3_11	-	USFL199
Salmonella enterica subsp. enterica serovar Newport str. SHSN006	1324340	PRJNA197514	197514	Proteobacteria	Gammaproteobacteria	4.85407	52	-	AROO01	544	4960	4661	4/25/17	4/27/17	Contig	"University of Maryland, College Park"	SAMN06677861	GCA_002109215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/215/GCA_002109215.1_S_Newport_SHSN006_v01	-	SHSN006
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.2742	50.5	-	LYCG01	372	5406	5082	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05007547	GCA_002190935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/935/GCA_002190935.1_ASM219093v1	-	ECOR42
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37908	65.6	-	MRFC01	17	4260	4089	5/11/17	5/23/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06094108	GCA_002130305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/305/GCA_002130305.1_ASM213030v1	-	02-R0113
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09095	39.5	-	CRSM01	68	2319	2069	3/22/15	3/4/17	Scaffold	SC	SAMEA1025605	GCA_001202975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/975/GCA_001202975.1_6805_2_9	-	SMRU1425
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.05228	39.6	-	CRWK01	42	2260	2003	3/23/15	3/4/17	Scaffold	SC	SAMEA1025268	GCA_001203015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/015/GCA_001203015.1_6807_1_20	-	SMRU1580
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39189	65.6	-	MRFF01	17	4280	4104	5/11/17	5/24/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06094111	GCA_002130345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/345/GCA_002130345.1_ASM213034v1	-	02-R0432
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.34958	50.3	-	LYCB01	1163	5415	5084	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05007900	GCA_002190945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/945/GCA_002190945.1_ASM219094v1	-	ECOR47
Salmonella enterica subsp. enterica serovar Newport str. SHSN007	1324342	PRJNA197516	197516	Proteobacteria	Gammaproteobacteria	4.66654	52.2	-	AROQ01	139	4686	4501	4/25/17	4/27/17	Contig	"University of Maryland, College Park"	SAMN06677859	GCA_002109245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/245/GCA_002109245.1_S_Newport_SHSN007_v01	-	SHSN007
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.90402	32.6	-	CSDD01	55	3077	2944	3/23/15	3/4/17	Contig	SC	SAMEA1324571	GCA_001203675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/675/GCA_001203675.1_7748_4_10	-	USFL010
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.86632	32.6	-	CSCM01	32	2999	2870	3/23/15	3/4/17	Contig	SC	SAMEA1324526	GCA_001203695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/695/GCA_001203695.1_7748_4_8	-	USFL008
Salmonella enterica subsp. enterica serovar Newport str. SHSN009	1324318	PRJNA197517	197517	Proteobacteria	Gammaproteobacteria	4.80679	52	-	AROR01	202	4886	4679	4/25/17	4/27/17	Contig	"University of Maryland, College Park"	SAMN06677858	GCA_002109255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/255/GCA_002109255.1_S_Newport_SHSN009_v01	-	SHSN009
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.75258	50.6	-	LYCF01	237	4882	4558	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05007549	GCA_002190955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/955/GCA_002190955.1_ASM219095v1	-	ECOR43
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.38802	65.6	-	MRFU01	9	4275	4084	5/11/17	5/23/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06094131	GCA_002130505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/505/GCA_002130505.1_ASM213050v1	-	M0007932-8
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.24009	39.5	-	CRBB01	82	2460	2214	3/22/15	3/11/17	Scaffold	SC	SAMEA1024966	GCA_001203075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/075/GCA_001203075.1_6730_8_12	-	SMRU732
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07376	39.7	-	CRCZ01	85	2274	2035	3/23/15	3/11/17	Scaffold	SC	SAMEA1024715	GCA_001203195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/195/GCA_001203195.1_6731_3_20	-	SMRU1052
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.40487	65.6	-	MRHH01	4	4285	4114	5/11/17	5/23/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06094170	GCA_002130935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/130/935/GCA_002130935.1_ASM213093v1	-	M0018356-7
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.21282	50.6	-	LYBZ01	425	5449	5060	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05010820	GCA_002190975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/975/GCA_002190975.1_ASM219097v1	-	ECOR49
Salmonella enterica subsp. enterica serovar Newport str. SHSN011	1324320	PRJNA197519	197519	Proteobacteria	Gammaproteobacteria	4.88891	52	-	AROT01	160	4900	4696	4/25/17	4/27/17	Contig	"University of Maryland, College Park"	SAMN06677856	GCA_002109285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/285/GCA_002109285.1_S_Newport_SHSN011_v01	-	SHSN011
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92152	32.7	-	CSFZ01	23	3088	2957	3/23/15	3/4/17	Contig	SC	SAMEA1710110	GCA_001203755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/755/GCA_001203755.1_9266_1_21	-	FL375
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87889	32.6	-	CSFD01	59	3031	2895	3/22/15	3/4/17	Contig	SC	SAMEA1324712	GCA_001203795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/795/GCA_001203795.1_7748_4_36	-	USFL035
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA348571	348571	Proteobacteria	Gammaproteobacteria	4.95896	52	-	MLFV01	90	5088	4796	4/25/17	4/27/17	Contig	Federal Insitute for Risk Assessment	SAMN05912852	GCA_002110505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/505/GCA_002110505.1_ASM211050v1	28369508	15-SA01028
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.42625	50.4	-	LYCA01	461	5586	5244	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05010819	GCA_002191025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/025/GCA_002191025.1_ASM219102v1	-	ECOR48
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.37104	65.6	-	MRHM01	12	4252	4092	5/11/17	5/23/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06094175	GCA_002131055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/055/GCA_002131055.1_ASM213105v1	-	M0013935-3
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08157	39.7	-	CQZY01	78	2304	2092	3/23/15	3/11/17	Scaffold	SC	SAMEA1024566	GCA_001203275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/275/GCA_001203275.1_6730_6_11	-	SMRU683
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.20099	39.4	-	CRFL01	91	2431	2180	3/23/15	3/11/17	Scaffold	SC	SAMEA1025440	GCA_001203295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/295/GCA_001203295.1_6736_4_18	-	SMRU1218
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.41177	65.6	-	MRIG01	40	4297	4107	5/11/17	5/23/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06094195	GCA_002131215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/215/GCA_002131215.1_ASM213121v1	-	M0001774-0
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.54339	50.5	-	LYBY01	496	5855	5404	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05010821	GCA_002191035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/035/GCA_002191035.1_ASM219103v1	-	ECOR50
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA348570	348570	Proteobacteria	Gammaproteobacteria	4.93833	52	-	MLFW01	93	5050	4775	4/25/17	4/27/17	Contig	Federal Insitute for Risk Assessment	SAMN05912850	GCA_002110515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/515/GCA_002110515.1_ASM211051v1	28369508	16-SA00749
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87998	32.6	-	CSIE01	34	3026	2896	3/23/15	3/4/17	Contig	SC	SAMEA1324678	GCA_001203835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/835/GCA_001203835.1_7738_4_51	-	USFL332
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.83143	32.7	-	CSGZ01	44	2967	2847	3/23/15	3/4/17	Contig	SC	SAMEA1466525	GCA_001203915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/915/GCA_001203915.1_7907_4_50	-	USFL143
Salmonella enterica subsp. enterica serovar Mississippi	913079	PRJNA354076	354076	Proteobacteria	Gammaproteobacteria	4.99987	52.1	-	MRAH01	249	5320	4940	5/11/17	5/22/17	Contig	Massey University	SAMN06041142	GCA_002127765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/765/GCA_002127765.1_ASM212776v1	28361266	GSB1072
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.62618	50.1	-	LYCI01	1407	5723	5298	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05007539	GCA_002191055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/055/GCA_002191055.1_ASM219105v1	-	ECOR40
Mycobacterium tuberculosis	1773	PRJNA343736	343736	Terrabacteria group	Actinobacteria	4.39017	65.6	-	MRIP01	5	4257	4093	5/11/17	5/23/17	Scaffold	"CETR, HSPH, Megan Murray, director"	SAMN06094204	GCA_002131405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/405/GCA_002131405.1_ASM213140v1	-	M0014540-0
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.16138	39.5	-	CRIP01	59	2376	2127	3/23/15	3/11/17	Scaffold	SC	SAMEA1025134	GCA_001203355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/355/GCA_001203355.1_6753_1_12	-	SMRU1476
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07466	39.6	-	CRRP01	63	2311	2062	3/22/15	3/11/17	Scaffold	SC	SAMEA1024837	GCA_001203395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/395/GCA_001203395.1_6805_1_24	-	SMRU1032
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36855	65.6	-	FPMW01	65	4269	4090	11/23/16	3/14/17	Scaffold	SC	SAMEA2682739	GCA_900120425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/425/GCA_900120425.1_14722_6_24	-	2926STDY5723489
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.28627	50.5	-	LYCE01	447	5463	5118	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05007550	GCA_002191075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/075/GCA_002191075.1_ASM219107v1	-	ECOR44
Salmonella enterica subsp. enterica serovar Mississippi	913079	PRJNA354076	354076	Proteobacteria	Gammaproteobacteria	4.99709	52.1	-	MRAI01	231	5323	4951	5/11/17	5/22/17	Contig	Massey University	SAMN06041143	GCA_002127775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/775/GCA_002127775.1_ASM212777v1	28361266	GSB1074
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.77998	32.7	-	CSJZ01	38	2905	2782	3/23/15	3/4/17	Contig	SC	SAMEA1324690	GCA_001204095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/095/GCA_001204095.1_7748_4_51	-	USFL050
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.91164	32.6	-	CSJV01	35	3061	2930	3/23/15	3/4/17	Contig	SC	SAMEA1324608	GCA_001204115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/115/GCA_001204115.1_7738_4_50	-	USFL331
Salmonella enterica subsp. enterica serovar Mississippi	913079	PRJNA354076	354076	Proteobacteria	Gammaproteobacteria	4.99732	52.1	-	MRAJ01	240	5322	4930	5/11/17	5/22/17	Contig	Massey University	SAMN06041144	GCA_002127805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/805/GCA_002127805.1_ASM212780v1	28361266	GSB1244
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	4.71003	50.7	-	LYCD01	200	4796	4562	6/12/17	6/14/17	Contig	Max von Pettenkofer-Institute	SAMN05007654	GCA_002191105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/105/GCA_002191105.1_ASM219110v1	-	ECOR45
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36696	65.6	-	FPNJ01	62	4263	4080	11/23/16	3/14/17	Scaffold	SC	SAMEA2682735	GCA_900120435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/435/GCA_900120435.1_14722_6_23	-	2926STDY5723485
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.18186	39.5	-	CRDZ01	75	2421	2178	3/23/15	3/10/17	Scaffold	SC	SAMEA1024946	GCA_001203415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/415/GCA_001203415.1_6731_5_14	-	SMRU1094
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.06726	39.6	-	CRBH01	56	2296	2053	3/22/15	3/11/17	Scaffold	SC	SAMEA1024926	GCA_001203435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/435/GCA_001203435.1_6730_8_24	-	SMRU744
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32505	65.6	-	FPNB01	71	4245	4066	11/23/16	3/14/17	Scaffold	SC	SAMEA2682779	GCA_900120445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/445/GCA_900120445.1_14722_6_40	-	2926STDY5723530
Escherichia coli	562	PRJNA387025	387025	Proteobacteria	Gammaproteobacteria	5.04476	50.9	-	NHPT01	145	5344	4960	6/14/17	6/19/17	Contig	Agriculture and Agri-Food Canada	SAMN07137398	GCA_002193155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/155/GCA_002193155.1_ASM219315v1	-	6294
Salmonella enterica subsp. houtenae serovar 40gt:-	1925258	PRJNA354076	354076	Proteobacteria	Gammaproteobacteria	4.69492	51.7	-	MRAG01	130	4794	4346	5/11/17	5/22/17	Contig	Massey University	SAMN06041141	GCA_002127815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/815/GCA_002127815.1_ASM212781v1	28361266	SR64
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92036	32.7	-	CSBX01	37	3085	2958	3/23/15	3/4/17	Contig	SC	SAMEA1324673	GCA_001204195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/195/GCA_001204195.1_7738_3_52	-	USFL239
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.86377	32.6	-	CSFE01	38	2996	2868	3/23/15	3/4/17	Contig	SC	SAMEA1466457	GCA_001204255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/255/GCA_001204255.1_7907_4_72	-	USFL164
Salmonella enterica subsp. enterica serovar Mississippi	913079	PRJNA354076	354076	Proteobacteria	Gammaproteobacteria	4.99833	52.1	-	MRAK01	236	5326	4935	5/11/17	5/22/17	Contig	Massey University	SAMN06041145	GCA_002127845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/845/GCA_002127845.1_ASM212784v1	28361266	GSB1253
Escherichia coli	562	PRJNA387025	387025	Proteobacteria	Gammaproteobacteria	4.659	50.8	-	NHPV01	81	4897	4482	6/14/17	6/19/17	Contig	Agriculture and Agri-Food Canada	SAMN07137396	GCA_002193165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/165/GCA_002193165.1_ASM219316v1	-	5956
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32303	65.6	-	FPOD01	65	4250	4073	11/23/16	3/14/17	Scaffold	SC	SAMEA2682744	GCA_900120455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/455/GCA_900120455.1_14722_6_25	-	2926STDY5723494
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.16533	39.5	-	CRAS01	89	2396	2166	3/22/15	3/11/17	Scaffold	SC	SAMEA1024656	GCA_001203455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/455/GCA_001203455.1_6730_7_23	-	SMRU719
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.13524	39.3	-	CQWD01	53	2340	2107	3/23/15	3/11/17	Scaffold	SC	SAMEA1025196	GCA_001203475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/475/GCA_001203475.1_6710_8_6	-	SMRU1398
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35998	65.6	-	FPOK01	89	4285	4082	11/23/16	3/14/17	Scaffold	SC	SAMEA2682704	GCA_900120465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/465/GCA_900120465.1_14722_6_12	-	2926STDY5723454
Escherichia coli	562	PRJNA387025	387025	Proteobacteria	Gammaproteobacteria	5.16701	50.7	-	NHPS01	37	5285	5012	6/14/17	6/19/17	Contig	Agriculture and Agri-Food Canada	SAMN07137399	GCA_002193195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/195/GCA_002193195.1_ASM219319v1	-	6297
Salmonella enterica subsp. enterica serovar Mississippi	913079	PRJNA354076	354076	Proteobacteria	Gammaproteobacteria	4.99738	52.1	-	MRAL01	254	5320	4936	5/11/17	5/22/17	Contig	Massey University	SAMN06041146	GCA_002127855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/855/GCA_002127855.1_ASM212785v1	28361266	GSB13
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87964	32.6	-	CSBP01	31	3020	2890	3/22/15	3/4/17	Contig	SC	SAMEA1324663	GCA_001204295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/295/GCA_001204295.1_7738_3_22	-	USFL209
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.85653	32.6	-	CSID01	26	2999	2875	3/23/15	3/4/17	Contig	SC	SAMEA1324518	GCA_001204415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/415/GCA_001204415.1_7738_4_71	-	USFL351
Salmonella enterica subsp. enterica serovar Mississippi	913079	PRJNA354076	354076	Proteobacteria	Gammaproteobacteria	4.99751	52.1	-	MRAM01	244	5331	4930	5/11/17	5/22/17	Contig	Massey University	SAMN06041147	GCA_002127865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/865/GCA_002127865.1_ASM212786v1	28361266	SR52
Escherichia coli	562	PRJNA387025	387025	Proteobacteria	Gammaproteobacteria	5.17146	50.7	-	NHPU01	85	5474	5113	6/14/17	6/19/17	Contig	Agriculture and Agri-Food Canada	SAMN07137397	GCA_002193205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/205/GCA_002193205.1_ASM219320v1	-	5959
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36455	65.6	-	FPNL01	65	4273	4088	11/23/16	3/14/17	Scaffold	SC	SAMEA2682706	GCA_900120475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/475/GCA_900120475.1_14722_6_14	-	2926STDY5723456
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14031	39.6	-	CRMR01	77	2340	2078	3/23/15	3/11/17	Scaffold	SC	SAMEA1025021	GCA_001203495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/495/GCA_001203495.1_6755_3_14	-	SMRU878
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11087	39.6	-	CRBI01	49	2309	2104	3/23/15	3/10/17	Scaffold	SC	SAMEA1025027	GCA_001203515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/515/GCA_001203515.1_6730_8_2	-	SMRU722
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32506	65.6	-	FPMX01	62	4247	4061	11/23/16	3/14/17	Scaffold	SC	SAMEA2682725	GCA_900120485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/485/GCA_900120485.1_14722_6_19	-	2926STDY5723475
Escherichia coli	562	PRJNA387025	387025	Proteobacteria	Gammaproteobacteria	4.68926	50.7	-	NHPW01	78	4848	4499	6/14/17	6/19/17	Contig	Agriculture and Agri-Food Canada	SAMN07137395	GCA_002193235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/235/GCA_002193235.1_ASM219323v1	-	5953
Salmonella enterica subsp. enterica serovar Mississippi	913079	PRJNA354076	354076	Proteobacteria	Gammaproteobacteria	4.97379	52.1	-	MRAP01	215	5297	4904	5/11/17	5/22/17	Contig	Massey University	SAMN06041150	GCA_002127875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/875/GCA_002127875.1_ASM212787v1	28361266	SR57
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87519	32.6	-	CSEZ01	26	3020	2890	3/23/15	3/4/17	Contig	SC	SAMEA1324623	GCA_001204475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/475/GCA_001204475.1_7738_3_51	-	USFL238
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88003	32.6	-	CSDS01	39	3023	2895	3/23/15	3/4/17	Contig	SC	SAMEA1324756	GCA_001204755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/755/GCA_001204755.1_7748_4_24	-	USFL023
Salmonella enterica subsp. enterica serovar Mississippi	913079	PRJNA354076	354076	Proteobacteria	Gammaproteobacteria	5.00435	52.1	-	MRAN01	261	5368	4943	5/11/17	5/22/17	Contig	Massey University	SAMN06041148	GCA_002127925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/925/GCA_002127925.1_ASM212792v1	28361266	SR54
Escherichia coli	562	PRJNA387025	387025	Proteobacteria	Gammaproteobacteria	5.30973	50.6	-	NHPY01	114	5491	5133	6/14/17	6/19/17	Contig	Agriculture and Agri-Food Canada	SAMN07137393	GCA_002193245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/245/GCA_002193245.1_ASM219324v1	-	5950
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36949	65.6	-	FPND01	67	4281	4090	11/23/16	3/14/17	Scaffold	SC	SAMEA2682784	GCA_900120495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/495/GCA_900120495.1_14722_6_42	-	2926STDY5723535
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.1419	39.6	-	CRBP01	95	2283	2041	3/23/15	3/11/17	Scaffold	SC	SAMEA1024933	GCA_001203555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/555/GCA_001203555.1_6731_1_10	-	SMRU994
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09125	39.6	-	CRWL01	59	2307	2078	3/23/15	3/11/17	Scaffold	SC	SAMEA1025329	GCA_001203595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/595/GCA_001203595.1_6807_1_22	-	SMRU1582
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36982	65.6	-	FPMZ01	64	4268	4084	11/23/16	3/14/17	Scaffold	SC	SAMEA2682771	GCA_900120505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/505/GCA_900120505.1_14722_6_34	-	2926STDY5723522
Escherichia coli	562	PRJNA387025	387025	Proteobacteria	Gammaproteobacteria	4.98587	50.8	-	NHPZ01	103	5321	4958	6/14/17	6/19/17	Contig	Agriculture and Agri-Food Canada	SAMN07137392	GCA_002193275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/275/GCA_002193275.1_ASM219327v1	-	5949
Salmonella enterica subsp. enterica serovar Mississippi	913079	PRJNA354076	354076	Proteobacteria	Gammaproteobacteria	5.00037	52.1	-	MRAO01	228	5323	4947	5/11/17	5/22/17	Contig	Massey University	SAMN06041149	GCA_002127935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/935/GCA_002127935.1_ASM212793v1	28361266	SR56
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.76016	32.6	-	CSBN01	25	2880	2758	3/23/15	3/4/17	Contig	SC	SAMEA1324747	GCA_001204875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/875/GCA_001204875.1_7738_3_78	-	USFL264
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88009	32.6	-	CSGH01	50	3027	2892	3/22/15	3/4/17	Contig	SC	SAMEA1324569	GCA_001204975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/975/GCA_001204975.1_7748_4_87	-	USFL085
Salmonella enterica	28901	PRJNA327110	327110	Proteobacteria	Gammaproteobacteria	4.80451	52.1	-	MBOQ01	44	4945	4700	5/16/17	5/30/17	Contig	Health Canada	SAMN05301513	GCA_002144395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/395/GCA_002144395.1_ASM214439v1	-	STy2299_1
Escherichia coli	562	PRJNA387025	387025	Proteobacteria	Gammaproteobacteria	4.75577	50.7	-	NHQB01	66	4926	4552	6/14/17	6/19/17	Contig	Agriculture and Agri-Food Canada	SAMN07137390	GCA_002193295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/295/GCA_002193295.1_ASM219329v1	-	5945
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36744	65.6	-	FPOL01	71	4273	4091	11/23/16	3/14/17	Scaffold	SC	SAMEA2682723	GCA_900120515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/515/GCA_900120515.1_14722_6_18	-	2926STDY5723473
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.16759	39.4	-	CRLM01	64	2376	2140	3/23/15	3/10/17	Scaffold	SC	SAMEA1025017	GCA_001203615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/615/GCA_001203615.1_6755_1_2	-	SMRU770
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.0828	39.7	-	CQWE01	70	2257	2007	3/23/15	3/11/17	Scaffold	SC	SAMEA1025214	GCA_001203655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/655/GCA_001203655.1_6710_8_5	-	SMRU1397
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37994	65.6	-	FPNC01	67	4287	4100	11/23/16	3/14/17	Scaffold	SC	SAMEA2682776	GCA_900120525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/525/GCA_900120525.1_14722_6_37	-	2926STDY5723527
Escherichia coli	562	PRJNA387025	387025	Proteobacteria	Gammaproteobacteria	5.09706	50.5	-	NHQC01	53	5175	4883	6/14/17	6/19/17	Contig	Agriculture and Agri-Food Canada	SAMN07137389	GCA_002193315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/315/GCA_002193315.1_ASM219331v1	-	5944
Salmonella enterica	28901	PRJNA327110	327110	Proteobacteria	Gammaproteobacteria	4.80526	52.1	-	MBOR01	46	4954	4699	5/16/17	5/30/17	Contig	Health Canada	SAMN05301514	GCA_002144415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/144/415/GCA_002144415.1_ASM214441v1	-	STy2299_100
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.9322	32.6	-	CSFF01	27	3097	2973	3/23/15	3/4/17	Contig	SC	SAMEA1324540	GCA_001204995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/995/GCA_001204995.1_7738_3_61	-	USFL248
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.8281	32.7	-	CSRC01	59	2920	2769	3/23/15	3/4/17	Contig	SC	SAMEA1463394	GCA_001205035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/035/GCA_001205035.1_7893_8_2	-	BSAR208
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA376284	376284	Proteobacteria	Gammaproteobacteria	5.016	52.2	-	MWQB01	538	5176	4791	5/22/17	5/24/17	Contig	Campden BRI	SAMN06368782	GCA_002156155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/155/GCA_002156155.1_ASM215615v1	-	NCIMB 1024
Escherichia coli	562	PRJNA387025	387025	Proteobacteria	Gammaproteobacteria	4.80918	50.8	-	NHQE01	112	5013	4638	6/14/17	6/19/17	Contig	Agriculture and Agri-Food Canada	SAMN07137387	GCA_002193325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/325/GCA_002193325.1_ASM219332v1	-	5936
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.364	65.6	-	FPOE01	64	4260	4065	11/23/16	3/14/17	Scaffold	SC	SAMEA2682777	GCA_900120535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/535/GCA_900120535.1_14722_6_38	-	2926STDY5723528
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.0966	39.8	-	CRGZ01	67	2309	2090	3/22/15	3/10/17	Scaffold	SC	SAMEA1025518	GCA_001203715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/715/GCA_001203715.1_6736_7_12	-	SMRU1284
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09986	39.6	-	CRIE01	65	2308	2049	3/22/15	3/11/17	Scaffold	SC	SAMEA1025122	GCA_001203815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/815/GCA_001203815.1_6736_8_4	-	SMRU1300
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37522	65.6	-	FPNV01	62	4277	4094	11/23/16	3/14/17	Scaffold	SC	SAMEA2682672	GCA_900120545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/545/GCA_900120545.1_14722_6_1	-	2926STDY5723422
Escherichia coli	562	PRJNA387025	387025	Proteobacteria	Gammaproteobacteria	4.76966	50.8	-	NHQF01	89	4991	4620	6/14/17	6/19/17	Contig	Agriculture and Agri-Food Canada	SAMN07137386	GCA_002193355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/355/GCA_002193355.1_ASM219335v1	-	5902
Salmonella enterica subsp. enterica serovar Ealing	1962638	PRJNA376487	376487	Proteobacteria	Gammaproteobacteria	4.84693	52.2	-	MWLW01	135	4936	4648	5/22/17	5/24/17	Contig	Campden BRI	SAMN06434194	GCA_002156225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/225/GCA_002156225.1_ASM215622v1	-	NCTC 11948
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.8836	32.6	-	CSDU01	49	3027	2900	3/23/15	3/4/17	Contig	SC	SAMEA1466495	GCA_001205075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/075/GCA_001205075.1_7907_4_80	-	USFL172
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92035	32.7	-	CSDL01	32	3085	2955	3/22/15	3/4/17	Contig	SC	SAMEA1324517	GCA_001205135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/135/GCA_001205135.1_7738_4_22	-	USFL303
Salmonella enterica subsp. enterica serovar Bristol	1962640	PRJNA376487	376487	Proteobacteria	Gammaproteobacteria	5.2976	51.6	-	MWLY01	508	5471	5063	5/22/17	5/24/17	Contig	Campden BRI	SAMN06434190	GCA_002156235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/235/GCA_002156235.1_ASM215623v1	-	NCTC 9853
Escherichia coli	562	PRJNA387025	387025	Proteobacteria	Gammaproteobacteria	4.96733	50.8	-	NHPX01	73	5300	4937	6/14/17	6/19/17	Contig	Agriculture and Agri-Food Canada	SAMN07137394	GCA_002193375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/375/GCA_002193375.1_ASM219337v1	-	5951
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3587	65.6	-	FPNT01	60	4258	4083	11/23/16	3/14/17	Scaffold	SC	SAMEA2682710	GCA_900120555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/555/GCA_900120555.1_14722_6_16	-	2926STDY5723460
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12307	39.6	-	CRDT01	63	2342	2120	3/23/15	3/11/17	Scaffold	SC	SAMEA1024696	GCA_001203855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/855/GCA_001203855.1_6731_4_6	-	SMRU1062
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.11559	39.8	-	CRGH01	66	2347	2123	3/23/15	3/11/17	Scaffold	SC	SAMEA1025324	GCA_001203875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/875/GCA_001203875.1_6736_5_7	-	SMRU1231
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36828	65.6	-	FPOI01	71	4268	4086	11/23/16	3/14/17	Scaffold	SC	SAMEA2682761	GCA_900120565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/565/GCA_900120565.1_14722_6_28	-	2926STDY5723511
Escherichia coli	562	PRJNA387025	387025	Proteobacteria	Gammaproteobacteria	5.08797	50.5	-	NHQA01	44	5171	4880	6/14/17	6/19/17	Contig	Agriculture and Agri-Food Canada	SAMN07137391	GCA_002193385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/385/GCA_002193385.1_ASM219338v1	-	5947
Salmonella enterica subsp. enterica serovar Gallinarum	594	PRJNA376487	376487	Proteobacteria	Gammaproteobacteria	4.94604	52	-	MWLV01	360	5068	4554	5/22/17	5/24/17	Contig	Campden BRI	SAMN06434195	GCA_002156255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/255/GCA_002156255.1_ASM215625v1	-	NCTC 10532
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87935	32.6	-	CSJK01	54	3027	2895	3/23/15	3/4/17	Contig	SC	SAMEA1324613	GCA_001205195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/195/GCA_001205195.1_7748_4_72	-	USFL070
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92267	32.6	-	CSIX01	36	3087	2953	3/22/15	3/4/17	Contig	SC	SAMEA1466491	GCA_001205395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/395/GCA_001205395.1_7907_4_94	-	USFL186
Salmonella enterica subsp. enterica serovar Banana	34039	PRJNA376487	376487	Proteobacteria	Gammaproteobacteria	4.66465	52.1	-	MWLZ01	154	4728	4476	5/22/17	5/24/17	Contig	Campden BRI	SAMN06434189	GCA_002156265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/265/GCA_002156265.1_ASM215626v1	-	NCTC 8718
Escherichia coli	562	PRJNA387025	387025	Proteobacteria	Gammaproteobacteria	4.77407	50.8	-	NHQG01	98	4993	4624	6/14/17	6/19/17	Contig	Agriculture and Agri-Food Canada	SAMN07137385	GCA_002193415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/415/GCA_002193415.1_ASM219341v1	-	5901
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3974	65.6	-	FPOF01	67	4304	4118	11/23/16	3/14/17	Scaffold	SC	SAMEA2682790	GCA_900120575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/575/GCA_900120575.1_14722_6_44	-	2926STDY5723541
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.20626	39.5	-	CRHS01	72	2427	2172	3/23/15	3/11/17	Scaffold	SC	SAMEA1025371	GCA_001203955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/955/GCA_001203955.1_6736_8_10	-	SMRU1306
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.19903	39.5	-	CRSW01	44	2461	2223	3/23/15	3/4/17	Scaffold	SC	SAMEA1025616	GCA_001204015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/015/GCA_001204015.1_6805_3_23	-	SMRU1463
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36948	65.6	-	FPNR01	67	4269	4078	11/23/16	3/14/17	Scaffold	SC	SAMEA2682686	GCA_900120585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/585/GCA_900120585.1_14722_6_5	-	2926STDY5723436
Escherichia coli	562	PRJNA387025	387025	Proteobacteria	Gammaproteobacteria	5.02972	50.6	-	NHQH01	48	5140	4909	6/14/17	6/19/17	Contig	Agriculture and Agri-Food Canada	SAMN07137384	GCA_002193435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/435/GCA_002193435.1_ASM219343v1	-	5891
Salmonella enterica subsp. enterica serovar Birkenhead	1962641	PRJNA376487	376487	Proteobacteria	Gammaproteobacteria	4.77424	52.2	-	MWMA01	152	4918	4609	5/22/17	5/24/17	Contig	Campden BRI	SAMN06434188	GCA_002156305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/305/GCA_002156305.1_ASM215630v1	-	NCTC 7744
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.77898	32.7	-	CSQJ01	130	2869	2722	3/22/15	3/4/17	Contig	SC	SAMEA1709024	GCA_001205435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/435/GCA_001205435.1_8987_2_92	-	BSAR734
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88961	32.6	-	CSGV01	78	3034	2894	3/23/15	3/4/17	Contig	SC	SAMEA1324584	GCA_001205495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/495/GCA_001205495.1_7748_4_76	-	USFL074
Salmonella enterica subsp. enterica serovar Virchow	48409	PRJNA376487	376487	Proteobacteria	Gammaproteobacteria	4.73485	52.2	-	MWLT01	113	4827	4575	5/22/17	5/24/17	Contig	Campden BRI	SAMN06434197	GCA_002156325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/325/GCA_002156325.1_ASM215632v1	-	NCTC 5742
Escherichia coli	562	PRJNA387025	387025	Proteobacteria	Gammaproteobacteria	5.1938	50.7	-	NHQD01	81	5320	5044	6/14/17	6/19/17	Contig	Agriculture and Agri-Food Canada	SAMN07137388	GCA_002193445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/445/GCA_002193445.1_ASM219344v1	-	5937
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36664	65.6	-	FPNN01	60	4270	4093	11/23/16	3/14/17	Scaffold	SC	SAMEA2682708	GCA_900120595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/595/GCA_900120595.1_14722_6_15	-	2926STDY5723458
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.17623	39.5	-	CRRU01	79	2436	2175	3/23/15	3/4/17	Scaffold	SC	SAMEA1025586	GCA_001204035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/035/GCA_001204035.1_6805_2_10	-	SMRU1426
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.18895	39.6	-	CRJH01	49	2404	2174	3/23/15	3/4/17	Scaffold	SC	SAMEA1025117	GCA_001204055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/055/GCA_001204055.1_6753_2_14	-	SMRU1503
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35911	65.6	-	FPNS01	83	4282	4073	11/23/16	3/14/17	Scaffold	SC	SAMEA2682775	GCA_900120605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/605/GCA_900120605.1_14722_6_36	-	2926STDY5723526
Escherichia coli	562	PRJNA387025	387025	Proteobacteria	Gammaproteobacteria	5.17213	50.7	-	NHQI01	36	5295	5022	6/14/17	6/19/17	Contig	Agriculture and Agri-Food Canada	SAMN07137383	GCA_002193475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/475/GCA_002193475.1_ASM219347v1	-	5889
Salmonella enterica subsp. enterica serovar Oranienburg	28147	PRJNA376487	376487	Proteobacteria	Gammaproteobacteria	4.65754	52.1	-	MWLU01	160	4738	4455	5/22/17	5/24/17	Contig	Campden BRI	SAMN06434196	GCA_002156335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/335/GCA_002156335.1_ASM215633v1	-	NCTC 1710
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.93329	32.6	-	CSHZ01	29	3099	2976	3/23/15	3/4/17	Contig	SC	SAMEA1324527	GCA_001205535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/535/GCA_001205535.1_7738_3_62	-	USFL249
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.93446	32.7	-	CSDK01	48	3115	2973	3/22/15	3/4/17	Contig	SC	SAMEA1324583	GCA_001205895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/895/GCA_001205895.1_7738_4_7	-	USFL289
Salmonella enterica subsp. enterica serovar Daytona	1962639	PRJNA376487	376487	Proteobacteria	Gammaproteobacteria	5.24939	51.8	-	MWLX01	494	5460	5015	5/22/17	5/24/17	Contig	Campden BRI	SAMN06434193	GCA_002156345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/345/GCA_002156345.1_ASM215634v1	-	NCTC 7102
Escherichia coli	562	PRJNA387025	387025	Proteobacteria	Gammaproteobacteria	5.16525	50.7	-	NHQJ01	44	5285	5010	6/14/17	6/19/17	Contig	Agriculture and Agri-Food Canada	SAMN07137382	GCA_002193495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/495/GCA_002193495.1_ASM219349v1	-	5883
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36317	65.6	-	FPNP01	79	4278	4075	11/23/16	3/14/17	Scaffold	SC	SAMEA2682762	GCA_900120615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/615/GCA_900120615.1_14722_6_29	-	2926STDY5723512
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.14911	39.5	-	CRXJ01	74	2371	2147	3/23/15	3/4/17	Scaffold	SC	SAMEA1025398	GCA_001204075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/075/GCA_001204075.1_6807_2_4	-	SMRU1588
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.21995	39.6	-	CRWT01	55	2448	2217	3/23/15	3/4/17	Scaffold	SC	SAMEA1025362	GCA_001204215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/215/GCA_001204215.1_6807_2_1	-	SMRU1585
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35966	65.6	-	FPNG01	79	4269	4076	11/23/16	3/14/17	Scaffold	SC	SAMEA2682758	GCA_900120625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/625/GCA_900120625.1_14722_6_27	-	2926STDY5723508
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.50889	50.4	-	NHVQ01	270	6014	5517	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005831	GCA_002194555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/555/GCA_002194555.1_ASM219455v1	28550057	UMDUCD-O157-2016-S83
Salmonella enterica subsp. enterica	59201	PRJNA276385	276385	Proteobacteria	Gammaproteobacteria	4.7734	52	-	JZGW01	56	4922	4634	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372454	GCA_002176695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/695/GCA_002176695.1_ASM217669v1	-	UMDUCS69
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88133	32.6	-	CSCY01	38	3028	2895	3/22/15	3/4/17	Contig	SC	SAMEA1324688	GCA_001206095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/095/GCA_001206095.1_7738_3_24	-	USFL211
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.82784	32.6	-	CSDA01	26	2956	2840	3/23/15	3/4/17	Contig	SC	SAMEA1466506	GCA_001206115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/115/GCA_001206115.1_7907_4_7	-	USFL101
Salmonella enterica subsp. enterica	59201	PRJNA276386	276386	Proteobacteria	Gammaproteobacteria	4.76934	52	-	JZGX01	44	4916	4631	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372455	GCA_002176715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/715/GCA_002176715.1_ASM217671v1	-	UMDUCS70
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.37916	50.3	-	NHVU01	238	5819	5353	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005835	GCA_002194595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/595/GCA_002194595.1_ASM219459v1	28550057	UMDUCD-O157-2016-S79
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35901	65.6	-	FPNH01	74	4280	4085	11/23/16	3/14/17	Scaffold	SC	SAMEA2682703	GCA_900120635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/635/GCA_900120635.1_14722_6_11	-	2926STDY5723453
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.98405	39.8	-	CRXW01	52	2174	1983	3/22/15	3/4/17	Scaffold	SC	SAMEA970228	GCA_001204315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/315/GCA_001204315.1_5242_6_6	-	BHN573
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.14331	39.6	-	CQUJ01	70	2372	2122	3/23/15	3/4/17	Scaffold	SC	SAMEA1025444	GCA_001204335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/335/GCA_001204335.1_6710_6_16	-	SMRU1360
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32576	65.6	-	FPOM01	67	4246	4069	11/23/16	3/14/17	Scaffold	SC	SAMEA2682794	GCA_900120645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/645/GCA_900120645.1_14722_6_45	-	2926STDY5723545
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.37929	50.3	-	NHVT01	231	5809	5353	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005834	GCA_002194605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/605/GCA_002194605.1_ASM219460v1	28550057	UMDUCD-O157-2016-S80
Salmonella enterica subsp. enterica	59201	PRJNA276382	276382	Proteobacteria	Gammaproteobacteria	4.76854	52	-	JZGU01	56	4932	4634	6/7/17	6/9/17	Contig	"University of Maryland, College Park"	SAMN03372451	GCA_002176765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/176/765/GCA_002176765.1_ASM217676v1	-	UMDUCS66
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87947	32.6	-	CSEO01	60	3028	2893	3/23/15	3/4/17	Contig	SC	SAMEA1466519	GCA_001206195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/195/GCA_001206195.1_7907_4_51	-	USFL144
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92049	32.7	-	CSBW01	35	3089	2956	3/23/15	3/4/17	Contig	SC	SAMEA1324532	GCA_001206215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/215/GCA_001206215.1_7738_3_3	-	USFL191
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA382402	382402	Proteobacteria	Gammaproteobacteria	4.91931	52.1	-	NDGQ01	47	5111	4852	6/14/17	6/19/17	Contig	Cancer Research Center	SAMN06706231	GCA_002193525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/525/GCA_002193525.1_ASM219352v1	-	LT18
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.56035	50.3	-	NHVV01	372	6121	5577	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005836	GCA_002194625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/625/GCA_002194625.1_ASM219462v1	28550057	UMDUCD-O157-2016-S78
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36772	65.6	-	FPNK01	60	4265	4083	11/23/16	3/14/17	Scaffold	SC	SAMEA2682705	GCA_900120655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/655/GCA_900120655.1_14722_6_13	-	2926STDY5723455
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.16418	39.7	-	CRLV01	70	2347	2128	3/23/15	3/4/17	Scaffold	SC	SAMEA1025015	GCA_001204355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/355/GCA_001204355.1_6755_2_10	-	SMRU802
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12172	39.6	-	CRBO01	98	2324	2114	3/23/15	3/4/17	Scaffold	SC	SAMEA1025085	GCA_001204495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/495/GCA_001204495.1_6730_8_6	-	SMRU726
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36884	65.6	-	FPNX01	67	4280	4098	11/23/16	3/14/17	Scaffold	SC	SAMEA2682683	GCA_900120665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/665/GCA_900120665.1_14722_6_4	-	2926STDY5723433
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.55246	50.2	-	NHVW01	372	6126	5578	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005837	GCA_002194645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/645/GCA_002194645.1_ASM219464v1	28550057	UMDUCD-O157-2016-S77
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA382402	382402	Proteobacteria	Gammaproteobacteria	5.03045	52.1	-	NDGS01	52	5230	4979	6/14/17	6/19/17	Contig	Cancer Research Center	SAMN06706254	GCA_002193535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/535/GCA_002193535.1_ASM219353v1	-	LT20
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.77483	32.6	-	CSIK01	28	2893	2772	3/22/15	3/4/17	Contig	SC	SAMEA1324648	GCA_001206275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/275/GCA_001206275.1_7738_4_27	-	USFL308
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.80713	32.7	-	CSQH01	45	2923	2762	3/23/15	3/4/17	Contig	SC	SAMEA1708768	GCA_001206695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/695/GCA_001206695.1_8987_2_37	-	BSAR739
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA382402	382402	Proteobacteria	Gammaproteobacteria	4.72388	52.2	-	NDGP01	45	4821	4597	6/14/17	6/19/17	Contig	Cancer Research Center	SAMN06706048	GCA_002193545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/545/GCA_002193545.1_ASM219354v1	-	LT1
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.5457	50.3	-	NHVY01	348	6083	5568	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005839	GCA_002194675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/675/GCA_002194675.1_ASM219467v1	28550057	UMDUCD-O157-2016-S75
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36783	65.6	-	FPNI01	69	4273	4084	11/23/16	3/14/17	Scaffold	SC	SAMEA2682772	GCA_900120675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/675/GCA_900120675.1_14722_6_35	-	2926STDY5723523
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09085	39.7	-	CRUS01	50	2316	2081	3/22/15	3/4/17	Scaffold	SC	SAMEA1025502	GCA_001204555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/555/GCA_001204555.1_6805_6_17	-	SMRU1721
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10002	39.7	-	CRSV01	47	2312	2090	3/22/15	3/10/17	Scaffold	SC	SAMEA1025208	GCA_001204635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/635/GCA_001204635.1_6805_3_22	-	SMRU1462
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.31306	65.6	-	FPMY01	60	4239	3984	11/23/16	3/14/17	Scaffold	SC	SAMEA2682730	GCA_900120685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/685/GCA_900120685.1_14722_6_22	-	2926STDY5723480
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.54045	50.2	-	NHVX01	330	6067	5562	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005838	GCA_002194695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/695/GCA_002194695.1_ASM219469v1	28550057	UMDUCD-O157-2016-S76
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA382402	382402	Proteobacteria	Gammaproteobacteria	4.9893	52.1	-	NDGU01	50	5191	4940	6/14/17	6/19/17	Contig	Cancer Research Center	SAMN06706256	GCA_002193595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/595/GCA_002193595.1_ASM219359v1	-	LT22
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87267	32.6	-	CSHS01	30	3017	2891	3/23/15	3/4/17	Contig	SC	SAMEA1324651	GCA_001206735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/735/GCA_001206735.1_7738_3_82	-	USFL268
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92268	32.7	-	CSBC01	66	3102	2956	3/23/15	3/4/17	Contig	SC	SAMEA1324660	GCA_001206755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/755/GCA_001206755.1_7748_4_20	-	USFL019
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA382402	382402	Proteobacteria	Gammaproteobacteria	4.97431	52.1	-	NDGT01	50	5162	4912	6/14/17	6/19/17	Contig	Cancer Research Center	SAMN06706255	GCA_002193605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/605/GCA_002193605.1_ASM219360v1	-	LT21
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.40727	50.3	-	NHVZ01	297	5887	5403	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005840	GCA_002194705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/705/GCA_002194705.1_ASM219470v1	28550057	UMDUCD-O157-2016-S74
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3727	65.6	-	FPOA01	72	4294	4119	11/23/16	3/14/17	Scaffold	SC	SAMEA2682769	GCA_900120695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/695/GCA_900120695.1_14722_6_32	-	2926STDY5723520
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08662	39.5	-	CRMV01	66	2286	2046	3/23/15	3/10/17	Scaffold	SC	SAMEA1024534	GCA_001204735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/735/GCA_001204735.1_6755_3_2	-	SMRU866
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.20818	39.5	-	CRNM01	36	2467	2212	3/22/15	3/11/17	Scaffold	SC	SAMEA1024672	GCA_001204815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/815/GCA_001204815.1_6755_4_19	-	SMRU1147
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3824	65.6	-	FPNU01	62	4281	4103	11/23/16	3/14/17	Scaffold	SC	SAMEA2682768	GCA_900120705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/705/GCA_900120705.1_14722_6_31	-	2926STDY5723519
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.4186	50.4	-	NHWA01	316	5875	5397	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005841	GCA_002194715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/715/GCA_002194715.1_ASM219471v1	28550057	UMDUCD-O157-2016-S73
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA382402	382402	Proteobacteria	Gammaproteobacteria	5.0266	52.1	-	NDGR01	50	5228	4969	6/14/17	6/19/17	Contig	Cancer Research Center	SAMN06706253	GCA_002193615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/615/GCA_002193615.1_ASM219361v1	-	LT19
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.83394	32.6	-	CSFL01	36	2964	2846	3/22/15	3/4/17	Contig	SC	SAMEA1324657	GCA_001206795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/795/GCA_001206795.1_7748_4_80	-	USFL078
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.9502	32.6	-	CSDC01	50	3122	2997	3/22/15	3/4/17	Contig	SC	SAMEA1466454	GCA_001206875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/875/GCA_001206875.1_7907_4_57	-	USFL150
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.9159	52.2	-	NAOR01	53	5026	4723	6/19/17	6/22/17	Contig	CFSAN	SAMN06552084	GCA_002200285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/285/GCA_002200285.1_ASM220028v1	-	UZH-SAL-193-10
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.42213	50.3	-	NHWB01	301	5913	5407	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005845	GCA_002194755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/755/GCA_002194755.1_ASM219475v1	28550057	UMDUCD-O157-2016-S67
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.38027	65.6	-	FPNY01	78	4287	4100	11/23/16	3/14/17	Scaffold	SC	SAMEA2682728	GCA_900120715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/715/GCA_900120715.1_14722_6_21	-	2926STDY5723478
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.16154	39.6	-	CQZP01	64	2371	2102	3/23/15	3/10/17	Scaffold	SC	SAMEA1024569	GCA_001204855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/855/GCA_001204855.1_6730_5_23	-	SMRU671
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.15278	39.5	-	CRQZ01	54	2376	2144	3/23/15	3/10/17	Scaffold	SC	SAMEA1025108	GCA_001204935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/935/GCA_001204935.1_6791_6_6	-	SMRU630
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.38251	65.6	-	FPNQ01	88	4289	4107	11/23/16	3/14/17	Scaffold	SC	SAMEA2682785	GCA_900120725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/725/GCA_900120725.1_14722_6_43	-	2926STDY5723536
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.44055	50.4	-	NHWC01	352	5922	5412	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005846	GCA_002194765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/765/GCA_002194765.1_ASM219476v1	28550057	UMDUCD-O157-2016-S65
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.9126	52.2	-	NAOW01	58	5016	4715	6/19/17	6/22/17	Contig	CFSAN	SAMN06552090	GCA_002200335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/335/GCA_002200335.1_ASM220033v1	-	UZH-SAL-149-15
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.91272	32.6	-	CSJC01	41	3057	2931	3/23/15	3/4/17	Contig	SC	SAMEA1324705	GCA_001206995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/995/GCA_001206995.1_7738_3_25	-	USFL212
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88094	32.6	-	CSES01	31	3024	2896	3/22/15	3/4/17	Contig	SC	SAMEA1324699	GCA_001207235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/235/GCA_001207235.1_7738_4_52	-	USFL333
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.91327	52.2	-	NAPE01	65	5029	4722	6/19/17	6/22/17	Contig	CFSAN	SAMN06552100	GCA_002200435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/435/GCA_002200435.1_ASM220043v1	-	UZH-SAL-112-13
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.45065	50.4	-	NHWE01	337	5967	5444	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005849	GCA_002194775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/775/GCA_002194775.1_ASM219477v1	28550057	UMDUCD-O157-2016-S62
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.38346	65.6	-	FPOC01	58	4281	4102	11/23/16	3/14/17	Scaffold	SC	SAMEA2682681	GCA_900120735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/735/GCA_900120735.1_14722_6_3	-	2926STDY5723431
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.24342	39.4	-	CRGO01	89	2467	2213	3/23/15	3/11/17	Scaffold	SC	SAMEA1025140	GCA_001205015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/015/GCA_001205015.1_6736_6_11	-	SMRU1259
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08498	39.6	-	CQWH01	153	2263	2069	3/23/15	3/10/17	Scaffold	SC	SAMEA1024684	GCA_001205055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/055/GCA_001205055.1_6714_7_15	-	SMRU759
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3687	65.6	-	FPOO01	66	4287	4100	11/23/16	3/14/17	Scaffold	SC	SAMEA2682798	GCA_900120745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/745/GCA_900120745.1_14722_6_49	-	2926STDY5723549
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.4498	50.4	-	NHWD01	373	5966	5447	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005847	GCA_002194815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/815/GCA_002194815.1_ASM219481v1	28550057	UMDUCD-O157-2016-S64
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.91164	52.2	-	NAPN01	55	5028	4714	6/19/17	6/22/17	Contig	CFSAN	SAMN06552082	GCA_002200515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/515/GCA_002200515.1_ASM220051v1	-	UZH-SAL-31-13
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87463	32.6	-	CSJD01	32	3024	2895	3/23/15	3/4/17	Contig	SC	SAMEA1710097	GCA_001207315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/315/GCA_001207315.1_9235_1_20	-	FL395
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.90765	32.6	-	CSHK01	31	3047	2921	3/22/15	3/4/17	Contig	SC	SAMEA1324642	GCA_001207395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/395/GCA_001207395.1_7738_4_11	-	USFL293
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.92423	52.2	-	NAPO01	53	5030	4724	6/19/17	6/22/17	Contig	CFSAN	SAMN06552083	GCA_002200525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/525/GCA_002200525.1_ASM220052v1	-	UZH-SAL-25-13
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.44346	50.4	-	NHWM01	305	5947	5441	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005859	GCA_002194835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/835/GCA_002194835.1_ASM219483v1	28550057	UMDUCD-O157-2016-S52
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.34771	65.6	-	FPOG01	70	4275	4080	11/23/16	3/14/17	Scaffold	SC	SAMEA2682770	GCA_900120755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/755/GCA_900120755.1_14722_6_33	-	2926STDY5723521
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.06817	39.7	-	CRDI01	83	2278	2064	3/23/15	3/11/17	Scaffold	SC	SAMEA1024863	GCA_001205175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/175/GCA_001205175.1_6731_4_14	-	SMRU1070
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11337	39.6	-	CRAO01	79	2354	2100	3/23/15	3/10/17	Scaffold	SC	SAMEA1024616	GCA_001205355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/355/GCA_001205355.1_6730_7_10	-	SMRU706
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.31459	65.6	-	FPNF01	66	4231	3976	11/23/16	3/14/17	Scaffold	SC	SAMEA2682797	GCA_900120765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/765/GCA_900120765.1_14722_6_48	-	2926STDY5723548
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.42856	50.4	-	NHWG01	327	5907	5438	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005851	GCA_002194855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/855/GCA_002194855.1_ASM219485v1	28550057	UMDUCD-O157-2016-S60
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.9116	52.2	-	NAOS01	50	5017	4721	6/19/17	6/22/17	Contig	CFSAN	SAMN06552085	GCA_002200565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/565/GCA_002200565.1_ASM220056v1	-	UZH-SAL-186-10
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92285	32.7	-	CSBA01	61	3100	2959	3/22/15	3/4/17	Contig	SC	SAMEA1324625	GCA_001207415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/415/GCA_001207415.1_7748_4_6	-	USFL006
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.81873	32.7	-	CSRN01	51	2909	2766	3/22/15	3/4/17	Contig	SC	SAMEA1463468	GCA_001207435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/435/GCA_001207435.1_7907_7_66	-	BSAR169_2
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.86402	52.2	-	NAPI01	61	4947	4641	6/19/17	6/22/17	Contig	CFSAN	SAMN06552108	GCA_002200715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/715/GCA_002200715.1_ASM220071v1	-	UZH-SAL-79-10
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.42732	50.4	-	NHWI01	314	5913	5443	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005853	GCA_002194865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/865/GCA_002194865.1_ASM219486v1	28550057	UMDUCD-O157-2016-S58
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36336	65.6	-	FPNE01	86	4290	4084	11/23/16	3/14/17	Scaffold	SC	SAMEA2682795	GCA_900120775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/775/GCA_900120775.1_14722_6_46	-	2926STDY5723546
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.15078	39.6	-	CRMY01	91	2385	2142	3/23/15	3/11/17	Scaffold	SC	SAMEA1025092	GCA_001205415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/415/GCA_001205415.1_6755_3_24	-	SMRU888
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.14844	39.6	-	CRUK01	62	2352	2119	3/23/15	3/10/17	Scaffold	SC	SAMEA1025319	GCA_001205455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/455/GCA_001205455.1_6805_6_11	-	SMRU1715
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36481	65.6	-	FPNO01	78	4280	4084	11/23/16	3/14/17	Scaffold	SC	SAMEA2682796	GCA_900120785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/785/GCA_900120785.1_14722_6_47	-	2926STDY5723547
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.41645	50.4	-	NHWJ01	390	5885	5415	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005854	GCA_002194875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/875/GCA_002194875.1_ASM219487v1	28550057	UMDUCD-O157-2016-S57
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.56836	52.3	-	NAPJ01	38	4616	4385	6/19/17	6/22/17	Contig	CFSAN	SAMN06552115	GCA_002200735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/735/GCA_002200735.1_ASM220073v1	-	UZH-SAL-61-13
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87791	32.6	-	CSGK01	29	3016	2885	3/22/15	3/4/17	Contig	SC	SAMEA1324529	GCA_001207455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/455/GCA_001207455.1_7738_4_4	-	USFL286
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87604	32.6	-	CSGR01	34	3021	2901	3/23/15	3/4/17	Contig	SC	SAMEA1466527	GCA_001207595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/595/GCA_001207595.1_7907_4_48	-	USFL141
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.91344	52.2	-	NAPV01	54	5021	4713	6/19/17	6/22/17	Contig	CFSAN	SAMN06552080	GCA_002200755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/755/GCA_002200755.1_ASM220075v1	-	UZH-SAL-53-13
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.44941	50.4	-	NHWO01	298	5959	5445	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005863	GCA_002194915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/915/GCA_002194915.1_ASM219491v1	28550057	UMDUCD-O157-2016-S48
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.38137	65.6	-	FPNM01	56	4275	4096	11/23/16	3/14/17	Scaffold	SC	SAMEA2682767	GCA_900120795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/795/GCA_900120795.1_14722_6_30	-	2926STDY5723518
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12596	39.4	-	CQZE01	63	2348	2119	3/23/15	3/11/17	Scaffold	SC	SAMEA1024750	GCA_001205515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/515/GCA_001205515.1_6730_5_14	-	SMRU662
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.17948	39.6	-	CRRJ01	84	2433	2196	3/22/15	3/4/17	Scaffold	SC	SAMEA1025023	GCA_001205555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/555/GCA_001205555.1_6805_1_18	-	SMRU1026
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35647	65.6	-	FPNW01	68	4262	4077	11/23/16	3/14/17	Scaffold	SC	SAMEA2682676	GCA_900120805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/805/GCA_900120805.1_14722_6_2	-	2926STDY5723426
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.39482	50.3	-	NHWU01	315	5878	5391	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005875	GCA_002194935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/935/GCA_002194935.1_ASM219493v1	28550057	UMDUCD-O157-2016-S37
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA389548	389548	Proteobacteria	Gammaproteobacteria	4.62144	52	-	NIWS01	23	4691	4482	6/22/17	6/24/17	Contig	School of Veterinary Medicine and Animal Science / University of Sao Paulo	SAMN07202701	GCA_002205805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/805/GCA_002205805.1_ASM220580v1	-	SA323
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.8702	32.6	-	CSIP01	40	3014	2881	3/23/15	3/4/17	Contig	SC	SAMEA1466523	GCA_001207845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/845/GCA_001207845.1_7907_4_38	-	USFL131
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.78832	32.7	-	CSOG01	60	2873	2746	3/22/15	3/4/17	Contig	SC	SAMEA1708901	GCA_001208245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/245/GCA_001208245.1_9061_8_90	-	BSAR872
Salmonella enterica	28901	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.99176	52.1	-	NJGL01	64	5115	4790	7/5/17	7/7/17	Contig	CFSAN	SAMN07246860	GCA_002214875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/214/875/GCA_002214875.1_ASM221487v1	-	MOD1_Per136
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.43944	50.4	-	NHWR01	371	5950	5418	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005869	GCA_002194955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/955/GCA_002194955.1_ASM219495v1	28550057	UMDUCD-O157-2016-S43
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35896	65.6	-	FPNA01	76	4278	4084	11/23/16	3/14/17	Scaffold	SC	SAMEA2682700	GCA_900120815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/815/GCA_900120815.1_14722_6_10	-	2926STDY5723450
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.15401	39.5	-	CQXY01	81	2406	2175	3/23/15	3/4/17	Scaffold	SC	SAMEA1024548	GCA_001205615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/615/GCA_001205615.1_6730_3_17	-	SMRU617
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14443	39.7	-	CRQJ01	85	2290	2051	3/22/15	3/4/17	Scaffold	SC	SAMEA1024854	GCA_001205675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/675/GCA_001205675.1_6775_2_4	-	SMRU844
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37112	65.6	-	FPNZ01	60	4274	4088	11/23/16	3/14/17	Scaffold	SC	SAMEA2682711	GCA_900120825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/825/GCA_900120825.1_14722_6_17	-	2926STDY5723461
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.56952	50.3	-	NHWT01	446	6132	5577	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005873	GCA_002194965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/965/GCA_002194965.1_ASM219496v1	28550057	UMDUCD-O157-2016-S39
Salmonella enterica subsp. enterica	59201	PRJNA219491	219491	Proteobacteria	Gammaproteobacteria	4.68424	52.1	-	NMOO01	63	4814	4484	7/27/17	8/1/17	Contig	FDA/CFSAN	SAMN03112859	GCA_002234315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/234/315/GCA_002234315.1_ASM223431v1	-	VA-WGS-00333
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.81164	32.7	-	CSEX01	29	2942	2828	3/23/15	3/4/17	Contig	SC	SAMEA1324649	GCA_001208345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/345/GCA_001208345.1_7748_4_41	-	USFL040
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.90688	32.7	-	CSCO01	48	3073	2939	3/22/15	3/4/17	Contig	SC	SAMEA1466479	GCA_001208385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/385/GCA_001208385.1_7907_4_55	-	USFL148
Salmonella enterica subsp. enterica	59201	PRJNA219491	219491	Proteobacteria	Gammaproteobacteria	4.76338	52.2	-	NMON01	59	4872	4622	7/27/17	8/1/17	Contig	FDA/CFSAN	SAMN03112879	GCA_002234335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/234/335/GCA_002234335.1_ASM223433v1	-	VA-WGS-00353
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.41363	50.3	-	NHWV01	327	5919	5416	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005878	GCA_002194975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/194/975/GCA_002194975.1_ASM219497v1	28550057	UMDUCD-O157-2016-S34
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.31295	65.6	-	FPOJ01	61	4219	4009	11/23/16	3/14/17	Scaffold	SC	SAMEA2682726	GCA_900120835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/835/GCA_900120835.1_14722_6_20	-	2926STDY5723476
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08897	39.6	-	CRAJ01	58	2304	2061	3/22/15	3/11/17	Scaffold	SC	SAMEA1024665	GCA_001205725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/725/GCA_001205725.1_6730_6_5	-	SMRU677
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.21683	39.7	-	CREJ01	52	2421	2182	3/23/15	3/4/17	Scaffold	SC	SAMEA1024877	GCA_001205755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/755/GCA_001205755.1_6731_5_7	-	SMRU1087
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35833	65.6	-	FPOH01	82	4276	4069	11/23/16	3/14/17	Scaffold	SC	SAMEA2682781	GCA_900120845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/845/GCA_900120845.1_14722_6_41	-	2926STDY5723532
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.47497	50.3	-	NHWW01	324	5998	5476	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005879	GCA_002195015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/015/GCA_002195015.1_ASM219501v1	28550057	UMDUCD-O157-2016-S33
Salmonella enterica	28901	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.97442	52.2	-	NKQM01	50	5103	4791	7/31/17	8/3/17	Contig	CFSAN	SAMN06552112	GCA_002237345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/345/GCA_002237345.1_ASM223734v1	28751886	UZH-SAL-70-15
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.96325	32.6	-	CSEH01	60	3144	2997	3/23/15	3/4/17	Contig	SC	SAMEA1466452	GCA_001208405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/405/GCA_001208405.1_7907_4_73	-	USFL165
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.91584	32.6	-	CSGB01	34	3073	2944	3/23/15	3/4/17	Contig	SC	SAMEA1324720	GCA_001208445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/445/GCA_001208445.1_7738_3_96	-	USFL282
"Salmonella enterica subsp. diarizonae serovar 60:r:e,n,x,z15"	1173779	PRJNA308180	308180	Proteobacteria	Gammaproteobacteria	5.01373	51.4	-	NLBM01	72	5004	4616	8/4/17	8/6/17	Contig	FDA	SAMN05195912	GCA_002241435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/435/GCA_002241435.1_ASM224143v1	-	CFSAN051017
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.435	50.3	-	NHWX01	353	5949	5442	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005880	GCA_002195035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/035/GCA_002195035.1_ASM219503v1	28550057	UMDUCD-O157-2016-S32
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.38262	65.6	-	FPON01	73	4287	4104	11/23/16	3/14/17	Scaffold	SC	SAMEA2682778	GCA_900120855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/855/GCA_900120855.1_14722_6_39	-	2926STDY5723529
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10146	39.5	-	CRBS01	69	2315	2083	3/23/15	3/4/17	Scaffold	SC	SAMEA1024826	GCA_001205795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/795/GCA_001205795.1_6731_1_4	-	SMRU988
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07875	39.7	-	CRCW01	69	2306	2087	3/22/15	3/4/17	Scaffold	SC	SAMEA1024794	GCA_001205815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/815/GCA_001205815.1_6731_3_24	-	SMRU1056
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36246	65.6	-	FPOB01	69	4273	4082	11/23/16	3/14/17	Scaffold	SC	SAMEA2682799	GCA_900120865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/865/GCA_900120865.1_14722_6_50	-	2926STDY5723550
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.41975	50.3	-	NHXC01	312	5920	5407	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005885	GCA_002195045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/045/GCA_002195045.1_ASM219504v1	28550057	UMDUCD-O157-2016-S27
Salmonella enterica subsp. enterica serovar Rubislaw	598	PRJNA308180	308180	Proteobacteria	Gammaproteobacteria	5.0212	52.2	-	NLBN01	85	5173	4839	8/4/17	8/6/17	Contig	FDA	SAMN05195913	GCA_002241455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/455/GCA_002241455.1_ASM224145v1	-	CFSAN051018
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.76261	32.7	-	CSBE01	13	2827	2668	3/23/15	3/4/17	Contig	SC	SAMEA1463479	GCA_001208645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/645/GCA_001208645.1_7907_7_1	-	BSAR112
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.80747	32.7	-	CSPH01	52	2892	2744	3/22/15	3/4/17	Contig	SC	SAMEA1463390	GCA_001208665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/665/GCA_001208665.1_7907_7_87	-	BSAR193_2
Salmonella enterica	28901	PRJNA308180	308180	Proteobacteria	Gammaproteobacteria	4.81863	52.2	-	NLBR01	43	4948	4691	8/4/17	8/6/17	Contig	FDA	SAMN05195918	GCA_002241465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/465/GCA_002241465.1_ASM224146v1	-	CFSAN051023
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.48151	50.2	-	NHWY01	352	6027	5506	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005881	GCA_002195055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/055/GCA_002195055.1_ASM219505v1	28550057	UMDUCD-O157-2016-S31
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36674	65.6	-	FPOP01	70	4279	4087	11/23/16	3/14/17	Scaffold	SC	SAMEA2682803	GCA_900120875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/875/GCA_900120875.1_14722_6_52	-	2926STDY5723554
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.24134	39.5	-	CQYB01	93	2477	2222	3/22/15	3/4/17	Scaffold	SC	SAMEA1024956	GCA_001205835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/835/GCA_001205835.1_6730_3_21	-	SMRU621
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12309	39.5	-	CRUV01	57	2340	2090	3/23/15	3/4/17	Scaffold	SC	SAMEA1025480	GCA_001205855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/855/GCA_001205855.1_6805_6_20	-	SMRU1724
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36753	65.6	-	FPOQ01	71	4280	4089	11/23/16	3/14/17	Scaffold	SC	SAMEA2682812	GCA_900120885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/885/GCA_900120885.1_14722_6_54	-	2926STDY5723563
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.48024	50.3	-	NHXD01	291	6000	5496	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005886	GCA_002195075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/075/GCA_002195075.1_ASM219507v1	28550057	UMDUCD-O157-2016-S26
Salmonella enterica	28901	PRJNA308180	308180	Proteobacteria	Gammaproteobacteria	4.81528	52.2	-	NLBS01	44	4957	4686	8/4/17	8/6/17	Contig	FDA	SAMN05195919	GCA_002241495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/495/GCA_002241495.1_ASM224149v1	-	CFSAN051024
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88056	32.6	-	CSCS01	27	3028	2904	3/23/15	3/4/17	Contig	SC	SAMEA1324643	GCA_001208745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/745/GCA_001208745.1_7738_3_83	-	USFL269
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88698	32.6	-	CSFO01	28	3034	2901	3/23/15	3/4/17	Contig	SC	SAMEA1710075	GCA_001208825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/825/GCA_001208825.1_9266_1_7	-	FL361
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308180	308180	Proteobacteria	Gammaproteobacteria	4.81551	52.2	-	NLBU01	39	4949	4689	8/4/17	8/6/17	Contig	FDA	SAMN05195922	GCA_002241515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/515/GCA_002241515.1_ASM224151v1	-	CFSAN051027
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.47555	50.3	-	NHXE01	286	5987	5488	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005887	GCA_002195115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/115/GCA_002195115.1_ASM219511v1	28550057	UMDUCD-O157-2016-S25
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36641	65.6	-	FPOT01	76	4276	4083	11/23/16	3/14/17	Scaffold	SC	SAMEA2682806	GCA_900120895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/895/GCA_900120895.1_14722_6_53	-	2926STDY5723557
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.13523	39.6	-	CRUZ01	70	2355	2148	3/22/15	3/4/17	Scaffold	SC	SAMEA1025409	GCA_001205995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/995/GCA_001205995.1_6805_6_24	-	SMRU1728
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.13721	39.6	-	CRIJ01	70	2390	2147	3/23/15	3/4/17	Scaffold	SC	SAMEA1025147	GCA_001206015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/015/GCA_001206015.1_6736_8_5	-	SMRU1301
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37638	65.6	-	FPOR01	69	4282	4109	11/23/16	3/14/17	Scaffold	SC	SAMEA2682813	GCA_900120905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/905/GCA_900120905.1_14722_6_55	-	2926STDY5723564
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.4629	50.3	-	NHXF01	338	5974	5465	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005888	GCA_002195125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/125/GCA_002195125.1_ASM219512v1	28550057	UMDUCD-O157-2016-S24
Salmonella enterica subsp. enterica serovar Bardo	932733	PRJNA308180	308180	Proteobacteria	Gammaproteobacteria	4.81686	52.2	-	NLBX01	41	4951	4687	8/4/17	8/6/17	Contig	FDA	SAMN05195925	GCA_002241535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/535/GCA_002241535.1_ASM224153v1	-	CFSAN051030
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92161	32.7	-	CSDR01	28	3090	2957	3/23/15	3/4/17	Contig	SC	SAMEA1710111	GCA_001208925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/925/GCA_001208925.1_9266_1_20	-	FL374
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87948	32.6	-	CSFP01	32	3024	2897	3/23/15	3/4/17	Contig	SC	SAMEA1324586	GCA_001208945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/945/GCA_001208945.1_7738_4_61	-	USFL342
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308180	308180	Proteobacteria	Gammaproteobacteria	4.90513	52.1	-	NLBW01	53	5039	4774	8/4/17	8/6/17	Contig	FDA	SAMN05195924	GCA_002241545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/545/GCA_002241545.1_ASM224154v1	-	CFSAN051029
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.44387	50.3	-	NHXI01	342	5957	5452	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005891	GCA_002195135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/135/GCA_002195135.1_ASM219513v1	28550057	UMDUCD-O157-2016-S21
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.38024	65.6	-	FPOS01	66	4279	4105	11/23/16	3/14/17	Scaffold	SC	SAMEA2682819	GCA_900120915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/915/GCA_900120915.1_14722_6_58	-	2926STDY5723570
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10127	39.7	-	CRVH01	101	2360	2139	3/22/15	3/11/17	Scaffold	SC	SAMEA1026090	GCA_001206255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/255/GCA_001206255.1_6805_7_10	-	SMRU1739
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.13468	39.5	-	CROQ01	57	2360	2136	3/23/15	3/11/17	Scaffold	SC	SAMEA1025350	GCA_001206295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/295/GCA_001206295.1_6755_5_7	-	SMRU1159
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36973	65.6	-	FPOW01	71	4284	4096	11/23/16	3/14/17	Scaffold	SC	SAMEA2682820	GCA_900120925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/925/GCA_900120925.1_14722_6_59	-	2926STDY5723571
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.42921	50.3	-	NHXH01	318	5928	5425	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005890	GCA_002195175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/175/GCA_002195175.1_ASM219517v1	28550057	UMDUCD-O157-2016-S22
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA308180	308180	Proteobacteria	Gammaproteobacteria	5.05582	52.1	-	NLCA01	59	5194	4900	8/4/17	8/6/17	Contig	FDA	SAMN05195928	GCA_002241555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/555/GCA_002241555.1_ASM224155v1	-	CFSAN051033
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.918	32.7	-	CSGO01	38	3080	2957	3/23/15	3/4/17	Contig	SC	SAMEA1324523	GCA_001208965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/965/GCA_001208965.1_7738_3_43	-	USFL230
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.9694	32.6	-	CSCF01	39	3141	3007	3/22/15	3/4/17	Contig	SC	SAMEA1324592	GCA_001208985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/985/GCA_001208985.1_7738_3_86	-	USFL272
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA308180	308180	Proteobacteria	Gammaproteobacteria	5.05493	52.1	-	NLCB01	55	5199	4903	8/4/17	8/6/17	Contig	FDA	SAMN05195929	GCA_002241595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/595/GCA_002241595.1_ASM224159v1	-	CFSAN051034
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.40944	50.3	-	NHXJ01	357	5906	5407	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005892	GCA_002195185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/185/GCA_002195185.1_ASM219518v1	28550057	UMDUCD-O157-2016-S20
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3642	65.6	-	FPOU01	66	4268	4084	11/23/16	3/14/17	Scaffold	SC	SAMEA2682817	GCA_900120935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/935/GCA_900120935.1_14722_6_57	-	2926STDY5723568
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.05957	39.7	-	CRXO01	40	2267	2046	3/23/15	3/11/17	Scaffold	SC	SAMEA1026164	GCA_001206315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/315/GCA_001206315.1_7038_8_38	-	SMRU2246
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.13382	39.6	-	CRPN01	58	2325	2101	3/23/15	3/11/17	Scaffold	SC	SAMEA1024795	GCA_001206355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/355/GCA_001206355.1_6775_1_18	-	SMRU834
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36709	65.6	-	FPOV01	70	4276	4091	11/23/16	3/14/17	Scaffold	SC	SAMEA2682688	GCA_900120945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/945/GCA_900120945.1_14722_6_6	-	2926STDY5723438
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.47738	50.3	-	NHXL01	286	5997	5498	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005808	GCA_002195195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/195/GCA_002195195.1_ASM219519v1	28550057	UMDUCD-O157-2016-S18
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308180	308180	Proteobacteria	Gammaproteobacteria	4.8116	52.2	-	NLBP01	50	4956	4663	8/4/17	8/6/17	Contig	FDA	SAMN05195915	GCA_002241615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/615/GCA_002241615.1_ASM224161v1	-	CFSAN051020
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92418	32.6	-	CSFJ01	39	3094	2964	3/23/15	3/4/17	Contig	SC	SAMEA1324645	GCA_001209005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/005/GCA_001209005.1_7738_3_38	-	USFL225
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.75011	32.7	-	CSBB01	12	2822	2660	3/23/15	3/4/17	Contig	SC	SAMEA1463410	GCA_001209085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/085/GCA_001209085.1_7907_7_23	-	BSAR111_2
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308180	308180	Proteobacteria	Gammaproteobacteria	4.81535	52.2	-	NLBQ01	43	4955	4689	8/4/17	8/6/17	Contig	FDA	SAMN05195917	GCA_002241635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/635/GCA_002241635.1_ASM224163v1	-	CFSAN051022
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.42051	50.3	-	NHXN01	338	5939	5415	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005810	GCA_002195235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/235/GCA_002195235.1_ASM219523v1	28550057	UMDUCD-O157-2016-S16
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36745	65.6	-	FPOY01	82	4279	4087	11/23/16	3/14/17	Scaffold	SC	SAMEA2682823	GCA_900120955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/955/GCA_900120955.1_14722_6_60	-	2926STDY5723574
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.97923	39.8	-	CRYR01	45	2201	1986	3/22/15	3/11/17	Scaffold	SC	SAMEA970290	GCA_001206415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/415/GCA_001206415.1_5242_8_4	-	BHN593
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11298	39.5	-	CRET01	56	2324	2094	3/23/15	3/10/17	Scaffold	SC	SAMEA1024883	GCA_001206475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/475/GCA_001206475.1_6731_6_21	-	SMRU1125
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.38024	65.6	-	FPOX01	62	4281	4098	11/23/16	3/14/17	Scaffold	SC	SAMEA2682824	GCA_900120965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/965/GCA_900120965.1_14722_6_61	-	2926STDY5723575
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.41275	50.3	-	NHXQ01	330	5915	5414	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005813	GCA_002195245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/245/GCA_002195245.1_ASM219524v1	28550057	UMDUCD-O157-2016-S13
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA308180	308180	Proteobacteria	Gammaproteobacteria	5.20744	52	-	NLCE01	57	5447	5155	8/4/17	8/6/17	Contig	FDA	SAMN05195932	GCA_002241655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/655/GCA_002241655.1_ASM224165v1	-	CFSAN051037
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87963	32.6	-	CSDM01	55	3033	2893	3/23/15	3/4/17	Contig	SC	SAMEA1466470	GCA_001209125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/125/GCA_001209125.1_7907_4_28	-	USFL121
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88024	32.6	-	CSIN01	28	3019	2895	3/23/15	3/4/17	Contig	SC	SAMEA1466492	GCA_001209165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/165/GCA_001209165.1_7907_4_43	-	USFL136
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308180	308180	Proteobacteria	Gammaproteobacteria	4.81719	52.2	-	NLBO01	48	4953	4692	8/4/17	8/6/17	Contig	FDA	SAMN05195914	GCA_002241665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/665/GCA_002241665.1_ASM224166v1	-	CFSAN051019
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.41306	50.3	-	NHXT01	287	5909	5412	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005816	GCA_002195255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/255/GCA_002195255.1_ASM219525v1	28550057	UMDUCD-O157-2016-S10
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36759	65.6	-	FPPB01	70	4270	4097	11/23/16	3/14/17	Scaffold	SC	SAMEA2682827	GCA_900120975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/975/GCA_900120975.1_14722_6_62	-	2926STDY5723578
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09921	39.6	-	CRTM01	60	2292	2039	3/22/15	3/11/17	Scaffold	SC	SAMEA1025188	GCA_001206535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/535/GCA_001206535.1_6805_4_22	-	SMRU1678
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.1057	39.5	-	CRBD01	60	2329	2093	3/22/15	3/14/17	Scaffold	SC	SAMEA1024923	GCA_001206555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/555/GCA_001206555.1_6730_8_13	-	SMRU733
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3712	65.6	-	FPPA01	72	4275	4091	11/23/16	3/14/17	Scaffold	SC	SAMEA2682833	GCA_900120985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/985/GCA_900120985.1_14722_6_63	-	2926STDY5723584
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.41125	50.3	-	NHXO01	341	5903	5405	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005811	GCA_002195265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/265/GCA_002195265.1_ASM219526v1	28550057	UMDUCD-O157-2016-S15
Salmonella enterica subsp. enterica serovar Hartford	568095	PRJNA308180	308180	Proteobacteria	Gammaproteobacteria	4.81515	52.1	-	NLBY01	49	4914	4648	8/4/17	8/6/17	Contig	FDA	SAMN05195926	GCA_002241695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/695/GCA_002241695.1_ASM224169v1	-	CFSAN051031
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92329	32.6	-	CSGP01	53	3103	2964	3/23/15	3/4/17	Contig	SC	SAMEA1324741	GCA_001209185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/185/GCA_001209185.1_7748_4_83	-	USFL081
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87844	32.6	-	CSGT01	52	3028	2896	3/22/15	3/4/17	Contig	SC	SAMEA1324510	GCA_001209205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/205/GCA_001209205.1_7748_4_31	-	USFL030
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308180	308180	Proteobacteria	Gammaproteobacteria	4.81546	52.2	-	NLBT01	44	4955	4691	8/4/17	8/6/17	Contig	FDA	SAMN05195921	GCA_002241705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/705/GCA_002241705.1_ASM224170v1	-	CFSAN051026
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.46823	50.3	-	NHXU01	318	5998	5487	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005817	GCA_002195315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/315/GCA_002195315.1_ASM219531v1	28550057	UMDUCD-O157-2016-S9
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.38101	65.6	-	FPOZ01	60	4279	4107	11/23/16	3/14/17	Scaffold	SC	SAMEA2682834	GCA_900120995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/120/995/GCA_900120995.1_14722_6_64	-	2926STDY5723585
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.16082	39.5	-	CRVS01	60	2399	2171	3/23/15	3/10/17	Scaffold	SC	SAMEA1025705	GCA_001206575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/575/GCA_001206575.1_6805_7_20	-	SMRU1749
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07435	39.7	-	CRWZ01	80	2281	2073	3/23/15	3/11/17	Scaffold	SC	SAMEA1025306	GCA_001206595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/595/GCA_001206595.1_6807_2_24	-	SMRU1608
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36661	65.6	-	FPPC01	70	4269	4090	11/23/16	3/14/17	Scaffold	SC	SAMEA2682841	GCA_900121005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/005/GCA_900121005.1_14722_6_68	-	2926STDY5723592
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.41764	50.3	-	NHXW01	301	5890	5408	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005819	GCA_002195325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/325/GCA_002195325.1_ASM219532v1	28550057	UMDUCD-O157-2016-S7
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308180	308180	Proteobacteria	Gammaproteobacteria	4.81639	52.2	-	NLBV01	40	4948	4681	8/4/17	8/6/17	Contig	FDA	SAMN05195923	GCA_002241725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/725/GCA_002241725.1_ASM224172v1	-	CFSAN051028
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88105	32.6	-	CSIF01	35	3027	2901	3/23/15	3/4/17	Contig	SC	SAMEA1466481	GCA_001209265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/265/GCA_001209265.1_7907_4_96	-	USFL188
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87635	32.6	-	CSGN01	33	3018	2893	3/22/15	3/4/17	Contig	SC	SAMEA1324697	GCA_001209345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/345/GCA_001209345.1_7748_4_42	-	USFL041
Salmonella enterica subsp. enterica serovar Hartford	568095	PRJNA308180	308180	Proteobacteria	Gammaproteobacteria	4.81608	52.1	-	NLBZ01	46	4918	4651	8/4/17	8/6/17	Contig	FDA	SAMN05195927	GCA_002241735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/735/GCA_002241735.1_ASM224173v1	-	CFSAN051032
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.47813	50.3	-	NHXV01	351	6008	5500	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005818	GCA_002195335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/335/GCA_002195335.1_ASM219533v1	28550057	UMDUCD-O157-2016-S8
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36591	65.6	-	FPPI01	70	4260	4083	11/23/16	3/14/17	Scaffold	SC	SAMEA2682836	GCA_900121025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/025/GCA_900121025.1_14722_6_66	-	2926STDY5723587
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11712	39.6	-	CRMB01	66	2343	2122	3/23/15	3/11/17	Scaffold	SC	SAMEA1024577	GCA_001206635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/635/GCA_001206635.1_6755_2_18	-	SMRU810
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.15267	39.6	-	CQXM01	59	2371	2108	3/23/15	3/11/17	Scaffold	SC	SAMEA1024620	GCA_001206655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/655/GCA_001206655.1_6730_1_2	-	SMRU578
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35556	65.6	-	FPPF01	77	4251	4075	11/23/16	3/14/17	Scaffold	SC	SAMEA2682838	GCA_900121035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/035/GCA_900121035.1_14722_6_67	-	2926STDY5723589
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.40579	50.3	-	NHXX01	347	5892	5400	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005820	GCA_002195355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/355/GCA_002195355.1_ASM219535v1	28550057	UMDUCD-O157-2016-S6
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA308180	308180	Proteobacteria	Gammaproteobacteria	5.21323	52	-	NLCC01	57	5446	5157	8/4/17	8/6/17	Contig	FDA	SAMN05195930	GCA_002241775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/775/GCA_002241775.1_ASM224177v1	-	CFSAN051035
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.77731	32.7	-	CSSQ01	36	2868	2726	3/22/15	3/4/17	Contig	SC	SAMEA1463326	GCA_001209365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/365/GCA_001209365.1_7907_7_21	-	BSAR203
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.80468	32.7	-	CSQK01	38	2893	2746	3/22/15	3/4/17	Contig	SC	SAMEA1529878	GCA_001209425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/425/GCA_001209425.1_8205_1_88	-	BSAR486
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA308180	308180	Proteobacteria	Gammaproteobacteria	5.21016	52	-	NLCD01	56	5450	5152	8/4/17	8/6/17	Contig	FDA	SAMN05195931	GCA_002241795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/795/GCA_002241795.1_ASM224179v1	-	CFSAN051036
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.41396	50.3	-	NHXY01	296	5917	5415	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005821	GCA_002195395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/395/GCA_002195395.1_ASM219539v1	28550057	UMDUCD-O157-2016-S5
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36581	65.6	-	FPPH01	73	4270	4086	11/23/16	3/14/17	Scaffold	SC	SAMEA2682689	GCA_900121045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/045/GCA_900121045.1_14722_6_7	-	2926STDY5723439
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.17241	39.7	-	CRVY01	97	2407	2113	3/23/15	3/10/17	Scaffold	SC	SAMEA1026158	GCA_001206675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/675/GCA_001206675.1_6805_7_5	-	SMRU1733
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.22906	39.4	-	CQZR01	106	2481	2225	3/23/15	3/10/17	Scaffold	SC	SAMEA1024824	GCA_001206775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/775/GCA_001206775.1_6730_5_9	-	SMRU657
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37258	65.6	-	FPPO01	72	4271	4081	11/23/16	3/14/17	Scaffold	SC	SAMEA2682844	GCA_900121055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/055/GCA_900121055.1_14722_6_71	-	2926STDY5723595
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.43639	50.3	-	NHYB01	304	5937	5439	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005824	GCA_002195405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/405/GCA_002195405.1_ASM219540v1	28550057	UMDUCD-O157-2016-S2
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA308180	308180	Proteobacteria	Gammaproteobacteria	5.20398	52	-	NLCF01	75	5444	5141	8/4/17	8/6/17	Contig	FDA	SAMN05195933	GCA_002241805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/805/GCA_002241805.1_ASM224180v1	-	CFSAN051038
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88115	32.6	-	CSER01	30	3027	2902	3/22/15	3/4/17	Contig	SC	SAMEA1324655	GCA_001209545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/545/GCA_001209545.1_7738_4_39	-	USFL320
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.93351	32.6	-	CSCT01	31	3102	2973	3/22/15	3/4/17	Contig	SC	SAMEA1324619	GCA_001209565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/565/GCA_001209565.1_7738_4_47	-	USFL328
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA308180	308180	Proteobacteria	Gammaproteobacteria	5.23738	52	-	NLCG01	73	5497	5179	8/4/17	8/6/17	Contig	FDA	SAMN05195935	GCA_002241835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/835/GCA_002241835.1_ASM224183v1	-	CFSAN051040
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.445	50.3	-	NHYC01	348	5949	5432	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005825	GCA_002195435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/435/GCA_002195435.1_ASM219543v1	28550057	UMDUCD-O157-2016-S1
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3649	65.6	-	FPPD01	69	4277	4082	11/23/16	3/14/17	Scaffold	SC	SAMEA2682846	GCA_900121065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/065/GCA_900121065.1_14722_6_73	-	2926STDY5723597
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.27334	39.5	-	CROO01	98	2520	2260	3/23/15	3/11/17	Scaffold	SC	SAMEA1025596	GCA_001206815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/815/GCA_001206815.1_6755_5_9	-	SMRU1161
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11873	39.5	-	CRLU01	75	2337	2095	3/22/15	3/11/17	Scaffold	SC	SAMEA1025044	GCA_001206855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/855/GCA_001206855.1_6755_2_1	-	SMRU793
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36473	65.6	-	FPPM01	68	4270	4081	11/23/16	3/14/17	Scaffold	SC	SAMEA2682849	GCA_900121075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/075/GCA_900121075.1_14722_6_74	-	2926STDY5723600
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.4639	50.3	-	NHYA01	322	5972	5472	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005823	GCA_002195445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/445/GCA_002195445.1_ASM219544v1	28550057	UMDUCD-O157-2016-S3
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA308180	308180	Proteobacteria	Gammaproteobacteria	5.05142	52.1	-	NLCH01	56	5197	4899	8/4/17	8/6/17	Contig	FDA	SAMN05195937	GCA_002241855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/855/GCA_002241855.1_ASM224185v1	-	CFSAN051042
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88038	32.6	-	CSEB01	32	3020	2892	3/23/15	3/4/17	Contig	SC	SAMEA1324691	GCA_001209605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/605/GCA_001209605.1_7738_4_63	-	USFL344
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88042	32.6	-	CSFI01	34	3028	2901	3/22/15	3/4/17	Contig	SC	SAMEA1324539	GCA_001209625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/625/GCA_001209625.1_7738_4_23	-	USFL304
Salmonella enterica subsp. enterica serovar Newport str. CVM79_1594	1399778	PRJNA218815	218815	Proteobacteria	Gammaproteobacteria	4.79742	52.2	-	JAMH01	72	4914	4652	8/7/17	8/9/17	Contig	"University of Maryland, College Park"	SAMN02737304	GCA_002242195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/195/GCA_002242195.1_ASM224219v1	-	CVM79_1594
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.53302	50.3	-	NHVM01	272	6042	5559	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005827	GCA_002195475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/475/GCA_002195475.1_ASM219547v1	28550057	UMDUCD-O157-2016-S87
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35569	65.6	-	FPPS01	76	4279	4071	11/23/16	3/14/17	Scaffold	SC	SAMEA2682843	GCA_900121085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/085/GCA_900121085.1_14722_6_70	-	2926STDY5723594
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11409	39.7	-	CREO01	78	2365	2130	3/23/15	3/4/17	Scaffold	SC	SAMEA1024866	GCA_001207115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/115/GCA_001207115.1_6731_5_9	-	SMRU1089
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.15132	39.6	-	CQVG01	50	2274	2042	3/23/15	3/15/17	Scaffold	SC	SAMEA1025402	GCA_001207135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/135/GCA_001207135.1_6710_7_22	-	SMRU1390
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35427	65.6	-	FPPQ01	66	4275	4066	11/23/16	3/14/17	Scaffold	SC	SAMEA2682845	GCA_900121095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/095/GCA_900121095.1_14722_6_72	-	2926STDY5723596
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.43554	50.3	-	NHVN01	275	5929	5443	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005828	GCA_002195485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/485/GCA_002195485.1_ASM219548v1	28550057	UMDUCD-O157-2016-S86
Salmonella enterica subsp. enterica serovar Newport str. CVM79_1357	1399779	PRJNA218816	218816	Proteobacteria	Gammaproteobacteria	4.75715	52.2	-	JAMI01	47	4848	4620	8/7/17	8/9/17	Contig	"University of Maryland, College Park"	SAMN02737303	GCA_002242215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/215/GCA_002242215.1_ASM224221v1	-	CVM79_1357
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.78844	32.7	-	CSMU01	54	2900	2732	3/23/15	3/4/17	Contig	SC	SAMEA1708844	GCA_001209685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/685/GCA_001209685.1_8987_2_52	-	BSAR729
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92228	32.6	-	CSHN01	37	3088	2957	3/23/15	3/4/17	Contig	SC	SAMEA1324659	GCA_001209725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/725/GCA_001209725.1_7738_3_53	-	USFL240
Salmonella enterica subsp. enterica serovar Newport str. CVM30171	1399784	PRJNA218822	218822	Proteobacteria	Gammaproteobacteria	5.04243	52.2	-	JAMN01	57	5235	4991	8/7/17	8/9/17	Contig	"University of Maryland, College Park"	SAMN02737311	GCA_002242355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/355/GCA_002242355.1_ASM224235v1	-	CVM30171
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.51015	50.3	-	NHVP01	282	6019	5528	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005830	GCA_002195515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/515/GCA_002195515.1_ASM219551v1	28550057	UMDUCD-O157-2016-S84
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.34612	65.6	-	FPPG01	72	4266	4072	11/23/16	3/14/17	Scaffold	SC	SAMEA2682842	GCA_900121105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/105/GCA_900121105.1_14722_6_69	-	2926STDY5723593
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07628	39.6	-	CRLW01	63	2271	2060	3/23/15	3/4/17	Scaffold	SC	SAMEA1024664	GCA_001207155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/155/GCA_001207155.1_6755_1_9	-	SMRU777
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.20285	39.5	-	CRWQ01	68	2457	2225	3/23/15	3/4/17	Scaffold	SC	SAMEA1025265	GCA_001207175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/175/GCA_001207175.1_6807_1_6	-	SMRU1566
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36929	65.6	-	FPPK01	75	4275	4083	11/23/16	3/14/17	Scaffold	SC	SAMEA2682851	GCA_900121115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/115/GCA_900121115.1_14722_6_75	-	2926STDY5723602
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.42454	50.3	-	NHVO01	267	5924	5430	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005829	GCA_002195525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/525/GCA_002195525.1_ASM219552v1	28550057	UMDUCD-O157-2016-S85
Salmonella enterica subsp. enterica serovar Newport str. CVM20776	1399782	PRJNA218819	218819	Proteobacteria	Gammaproteobacteria	4.98215	52.1	-	JAML01	50	5165	4923	8/7/17	8/9/17	Contig	"University of Maryland, College Park"	SAMN02737306	GCA_002242395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/395/GCA_002242395.1_ASM224239v1	-	CVM20776
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88054	32.6	-	CSIH01	35	3029	2898	3/23/15	3/4/17	Contig	SC	SAMEA1324716	GCA_001209745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/745/GCA_001209745.1_7738_3_7	-	USFL195
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.81631	32.7	-	CSBQ01	25	2957	2845	3/23/15	3/4/17	Contig	SC	SAMEA1324717	GCA_001209765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/765/GCA_001209765.1_7738_3_48	-	USFL235
Salmonella enterica subsp. enterica serovar Enteritidis str. SHSE001	1400811	PRJNA218927	218927	Proteobacteria	Gammaproteobacteria	4.88837	51.7	-	JAMW01	70	4991	4720	8/7/17	8/9/17	Contig	"University of Maryland, College Park"	SAMN02737319	GCA_002242515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/515/GCA_002242515.1_ASM224251v1	-	SHSE001
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.60102	50.3	-	NHVS01	364	6158	5641	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005833	GCA_002195535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/535/GCA_002195535.1_ASM219553v1	28550057	UMDUCD-O157-2016-S81
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.31388	65.6	-	FPPN01	66	4235	4061	11/23/16	3/14/17	Scaffold	SC	SAMEA2682852	GCA_900121125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/125/GCA_900121125.1_14722_6_76	-	2926STDY5723603
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.13559	39.5	-	CRSF01	69	2363	2122	3/23/15	3/4/17	Scaffold	SC	SAMEA1025515	GCA_001207195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/195/GCA_001207195.1_6805_2_20	-	SMRU1436
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08086	39.6	-	CQWC01	63	2315	2074	3/22/15	3/4/17	Scaffold	SC	SAMEA1025152	GCA_001207255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/255/GCA_001207255.1_6710_8_3	-	SMRU1395
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32181	65.6	-	FPPE01	75	4248	4069	11/23/16	3/14/17	Scaffold	SC	SAMEA2682854	GCA_900121135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/135/GCA_900121135.1_14722_6_78	-	2926STDY5723605
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.50952	50.4	-	NHVR01	277	6013	5521	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005832	GCA_002195565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/565/GCA_002195565.1_ASM219556v1	28550057	UMDUCD-O157-2016-S82
Salmonella enterica subsp. enterica serovar Enteritidis str. SHSE002	1400812	PRJNA218928	218928	Proteobacteria	Gammaproteobacteria	4.85443	52.2	-	JAMX01	38	5018	4757	8/7/17	8/9/17	Contig	"University of Maryland, College Park"	SAMN02737314	GCA_002242555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/555/GCA_002242555.1_ASM224255v1	-	SHSE002
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87909	32.6	-	CSFC01	31	3022	2893	3/23/15	3/4/17	Contig	SC	SAMEA1324515	GCA_001209885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/885/GCA_001209885.1_7738_3_73	-	USFL259
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92637	32.7	-	CSDV01	34	3094	2966	3/23/15	3/4/17	Contig	SC	SAMEA1324509	GCA_001209925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/925/GCA_001209925.1_7738_3_63	-	USFL250
Salmonella enterica subsp. enterica serovar Enteritidis str. SHSE003	1400813	PRJNA218929	218929	Proteobacteria	Gammaproteobacteria	4.91479	52.1	-	JAMY01	53	5102	4812	8/7/17	8/9/17	Contig	"University of Maryland, College Park"	SAMN02737317	GCA_002242565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/565/GCA_002242565.1_ASM224256v1	-	SHSE003
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.44128	50.4	-	NHWH01	361	5957	5427	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005852	GCA_002195595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/595/GCA_002195595.1_ASM219559v1	28550057	UMDUCD-O157-2016-S59
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3211	65.6	-	FPPP01	73	4248	4064	11/23/16	3/14/17	Scaffold	SC	SAMEA2682853	GCA_900121145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/145/GCA_900121145.1_14722_6_77	-	2926STDY5723604
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10473	39.8	-	CRLY01	109	2282	1970	3/23/15	3/15/17	Scaffold	SC	SAMEA1025099	GCA_001207335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/335/GCA_001207335.1_6755_2_13	-	SMRU805
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.98764	39.8	-	CRYE01	47	2193	1998	3/23/15	3/4/17	Scaffold	SC	SAMEA970252	GCA_001207375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/375/GCA_001207375.1_5242_8_1	-	BHN590
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37115	65.6	-	FPPL01	74	4275	4086	11/23/16	3/14/17	Scaffold	SC	SAMEA2682856	GCA_900121155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/155/GCA_900121155.1_14722_6_79	-	2926STDY5723607
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.44909	50.4	-	NHWK01	344	5973	5456	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005855	GCA_002195605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/605/GCA_002195605.1_ASM219560v1	28550057	UMDUCD-O157-2016-S56
Salmonella enterica subsp. enterica serovar Enteritidis str. SHSE004	1400814	PRJNA218930	218930	Proteobacteria	Gammaproteobacteria	4.7494	52	-	JAMZ01	55	4847	4562	8/7/17	8/9/17	Contig	"University of Maryland, College Park"	SAMN02737320	GCA_002242595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/595/GCA_002242595.1_ASM224259v1	-	SHSE004
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88272	32.6	-	CSDW01	44	3037	2897	3/22/15	3/4/17	Contig	SC	SAMEA1710095	GCA_001210205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/205/GCA_001210205.1_9235_1_19	-	FL394
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.8527	32.6	-	CSDJ01	36	2994	2870	3/22/15	3/4/17	Contig	SC	SAMEA1324662	GCA_001210225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/225/GCA_001210225.1_7748_4_21	-	USFL020
Salmonella enterica subsp. enterica	59201	PRJNA396432	396432	Proteobacteria	Gammaproteobacteria	4.96741	52.1	-	NPIY01	117	5115	4792	8/14/17	8/16/17	Contig	Guangxi veterinary research institute	SAMN07426395	GCA_002250765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/765/GCA_002250765.1_ASM225076v1	-	GX20150603
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.42977	50.4	-	NHWF01	315	5915	5438	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005850	GCA_002195615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/615/GCA_002195615.1_ASM219561v1	28550057	UMDUCD-O157-2016-S61
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36781	65.6	-	FPPJ01	80	4283	4084	11/23/16	3/14/17	Scaffold	SC	SAMEA2682690	GCA_900121165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/165/GCA_900121165.1_14722_6_8	-	2926STDY5723440
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08615	39.6	-	CRDG01	70	2266	2025	3/23/15	3/6/17	Scaffold	SC	SAMEA1024817	GCA_001207495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/495/GCA_001207495.1_6731_3_8	-	SMRU1040
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.165	39.7	-	CRGW01	47	2354	2137	3/23/15	3/4/17	Scaffold	SC	SAMEA1025624	GCA_001207515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/515/GCA_001207515.1_6736_6_3	-	SMRU1251
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36266	65.6	-	FPPR01	66	4267	4080	11/23/16	3/14/17	Scaffold	SC	SAMEA2682857	GCA_900121175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/175/GCA_900121175.1_14722_6_80	-	2926STDY5723608
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.44774	50.4	-	NHWL01	380	5959	5441	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005856	GCA_002195625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/625/GCA_002195625.1_ASM219562v1	28550057	UMDUCD-O157-2016-S55
Salmonella enterica	28901	PRJNA381817	381817	Proteobacteria	Gammaproteobacteria	4.90785	52.2	-	NBXN01	62	5050	4739	8/14/17	8/16/17	Contig	"Center for Genomic Sciences, UNAM"	SAMN06689681	GCA_002251595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/595/GCA_002251595.1_ASM225159v1	-	2199
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.84556	32.6	-	CSGS01	35	2983	2864	3/23/15	3/4/17	Contig	SC	SAMEA1466528	GCA_001210265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/265/GCA_001210265.1_7907_4_67	-	USFL160
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92271	32.6	-	CSBH01	32	3090	2957	3/23/15	3/4/17	Contig	SC	SAMEA1324629	GCA_001210285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/285/GCA_001210285.1_7738_3_18	-	USFL206
Salmonella enterica	28901	PRJNA381816	381816	Proteobacteria	Gammaproteobacteria	4.81166	52.3	-	NBXM01	53	4911	4681	8/14/17	8/16/17	Contig	"Center for Genomic Sciences, UNAM"	SAMN06689678	GCA_002251675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/251/675/GCA_002251675.1_ASM225167v1	-	103
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.45269	50.4	-	NHWQ01	320	5964	5444	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005866	GCA_002195675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/675/GCA_002195675.1_ASM219567v1	28550057	UMDUCD-O157-2016-S45
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3589	65.6	-	FPPT01	83	4281	4076	11/23/16	3/14/17	Scaffold	SC	SAMEA2682858	GCA_900121185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/185/GCA_900121185.1_14722_6_81	-	2926STDY5723609
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11705	39.7	-	CRAD01	71	2295	2035	3/23/15	3/15/17	Scaffold	SC	SAMEA1024694	GCA_001207575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/575/GCA_001207575.1_6730_6_6	-	SMRU678
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.14292	39.5	-	CRGG01	63	2367	2140	3/23/15	3/4/17	Scaffold	SC	SAMEA1025617	GCA_001207615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/615/GCA_001207615.1_6736_5_3	-	SMRU1227
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36273	65.6	-	FPPV01	72	4265	4084	11/23/16	3/14/17	Scaffold	SC	SAMEA2682859	GCA_900121195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/195/GCA_900121195.1_14722_6_82	-	2926STDY5723610
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.44456	50.4	-	NHWN01	362	5948	5429	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005860	GCA_002195695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/695/GCA_002195695.1_ASM219569v1	28550057	UMDUCD-O157-2016-S51
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA396575	396575	Proteobacteria	Gammaproteobacteria	4.78214	52.2	-	NPJR01	213	4987	4646	8/15/17	8/17/17	Contig	Fluminense Federal University	SAMN07431981	GCA_002252345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/345/GCA_002252345.1_ASM225234v1	-	ST_PP_BR027
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.9493	32.6	-	CSHH01	37	3118	2996	3/23/15	3/4/17	Contig	SC	SAMEA1466496	GCA_001210325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/325/GCA_001210325.1_7907_4_6	-	USFL100
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92577	32.6	-	CSHR01	43	3095	2961	3/23/15	3/4/17	Contig	SC	SAMEA1466451	GCA_001210425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/425/GCA_001210425.1_7907_4_15	-	USFL109
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA396575	396575	Proteobacteria	Gammaproteobacteria	4.84101	52.3	-	NPJP01	213	5059	4735	8/15/17	8/17/17	Contig	Fluminense Federal University	SAMN07428911	GCA_002252355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/355/GCA_002252355.1_ASM225235v1	-	ST_PP_BR007
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.44276	50.4	-	NHWP01	378	5946	5429	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005864	GCA_002195705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/705/GCA_002195705.1_ASM219570v1	28550057	UMDUCD-O157-2016-S47
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37047	65.6	-	FPPX01	65	4286	4106	11/23/16	3/14/17	Scaffold	SC	SAMEA2682860	GCA_900121205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/205/GCA_900121205.1_14722_6_83	-	2926STDY5723611
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.05412	39.5	-	CRWN01	66	2278	2044	3/22/15	3/4/17	Scaffold	SC	SAMEA1025291	GCA_001207635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/635/GCA_001207635.1_6807_1_5	-	SMRU1565
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.19714	39.6	-	CRTY01	61	2401	2163	3/23/15	3/11/17	Scaffold	SC	SAMEA1025343	GCA_001207755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/755/GCA_001207755.1_6805_5_15	-	SMRU1695
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36773	65.6	-	FPPW01	67	4263	4089	11/23/16	3/14/17	Scaffold	SC	SAMEA2682861	GCA_900121215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/215/GCA_900121215.1_14722_6_84	-	2926STDY5723612
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.46377	50.3	-	NHWZ01	335	5966	5481	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005882	GCA_002195725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/725/GCA_002195725.1_ASM219572v1	28550057	UMDUCD-O157-2016-S30
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA396575	396575	Proteobacteria	Gammaproteobacteria	4.82148	52.4	-	NPJQ01	217	5036	4715	8/15/17	8/17/17	Contig	Fluminense Federal University	SAMN07429440	GCA_002252365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/365/GCA_002252365.1_ASM225236v1	-	ST_PP_BR026
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.77638	32.7	-	CSIZ01	26	2917	2772	3/23/15	3/4/17	Contig	SC	SAMEA1324701	GCA_001210565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/565/GCA_001210565.1_7748_4_50	-	USFL049
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.77498	32.6	-	CSBV01	25	2884	2766	3/23/15	3/4/17	Contig	SC	SAMEA1324564	GCA_001210625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/625/GCA_001210625.1_7738_3_74	-	USFL260
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA396575	396575	Proteobacteria	Gammaproteobacteria	4.86845	52.3	-	NPJT01	172	5082	4754	8/15/17	8/17/17	Contig	Fluminense Federal University	SAMN07432234	GCA_002252405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/405/GCA_002252405.1_ASM225240v1	-	ST_PP_BR032
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.54293	50.3	-	NHWS01	415	6095	5555	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005871	GCA_002195745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/745/GCA_002195745.1_ASM219574v1	28550057	UMDUCD-O157-2016-S41
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32485	65.6	-	FPPY01	68	4246	4069	11/23/16	3/14/17	Scaffold	SC	SAMEA2682862	GCA_900121225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/225/GCA_900121225.1_14722_6_85	-	2926STDY5723614
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08502	39.7	-	CQWJ01	140	2275	2081	3/23/15	3/10/17	Scaffold	SC	SAMEA1024707	GCA_001207805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/805/GCA_001207805.1_6714_7_13	-	SMRU757
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.16331	39.5	-	CRNZ01	51	2426	2180	3/23/15	3/11/17	Scaffold	SC	SAMEA1025212	GCA_001207885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/885/GCA_001207885.1_6755_5_11	-	SMRU1163
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37027	65.6	-	FPPZ01	72	4272	4087	11/23/16	3/14/17	Scaffold	SC	SAMEA2682863	GCA_900121235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/235/GCA_900121235.1_14722_6_86	-	2926STDY5723615
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.48265	50.3	-	NHXA01	333	6011	5486	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005883	GCA_002195775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/775/GCA_002195775.1_ASM219577v1	28550057	UMDUCD-O157-2016-S29
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA396575	396575	Proteobacteria	Gammaproteobacteria	4.87152	52.1	-	NPJU01	167	5089	4735	8/15/17	8/17/17	Contig	Fluminense Federal University	SAMN07432681	GCA_002252465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/465/GCA_002252465.1_ASM225246v1	-	ST_PP_BR045
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92315	32.7	-	CSIR01	33	3089	2961	3/23/15	3/4/17	Contig	SC	SAMEA1324722	GCA_001210785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/785/GCA_001210785.1_7738_3_56	-	USFL243
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.78795	32.7	-	CSNT01	40	2860	2720	3/22/15	3/4/17	Contig	SC	SAMEA1463458	GCA_001210805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/805/GCA_001210805.1_7907_7_77	-	BSAR183_2
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA396575	396575	Proteobacteria	Gammaproteobacteria	4.80637	52.3	-	NPJS01	176	4989	4666	8/15/17	8/17/17	Contig	Fluminense Federal University	SAMN07431992	GCA_002252605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/252/605/GCA_002252605.1_ASM225260v1	-	ST_PP_BR031
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.40748	50.4	-	NHXK01	398	5876	5381	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005893	GCA_002195795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/795/GCA_002195795.1_ASM219579v1	28550057	UMDUCD-O157-2016-S19
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35534	65.6	-	FPQA01	59	4256	4080	11/23/16	3/14/17	Scaffold	SC	SAMEA2682865	GCA_900121245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/245/GCA_900121245.1_14722_6_87	-	2926STDY5723617
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.15709	39.6	-	CQXZ01	82	2391	2164	3/23/15	3/11/17	Scaffold	SC	SAMEA1024597	GCA_001207965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/965/GCA_001207965.1_6730_3_14	-	SMRU614
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08351	39.7	-	CRBC01	68	2320	2091	3/23/15	3/11/17	Scaffold	SC	SAMEA1024990	GCA_001208025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/025/GCA_001208025.1_6730_8_19	-	SMRU739
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35729	65.6	-	FPQC01	75	4265	4081	11/23/16	3/14/17	Scaffold	SC	SAMEA2682866	GCA_900121255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/255/GCA_900121255.1_14722_6_88	-	2926STDY5723618
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.56841	50.3	-	NHXB01	293	6137	5625	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005884	GCA_002195805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/805/GCA_002195805.1_ASM219580v1	28550057	UMDUCD-O157-2016-S28
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJNA388842	388842	Proteobacteria	Gammaproteobacteria	4.82368	52	-	NIFP01	105	5011	4592	8/18/17	8/21/17	Contig	"Atta-ur-Rehman School of Applied Biosciences, National University of Science and Technology"	SAMN07187729	GCA_002259945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/945/GCA_002259945.1_ASM225994v1	-	Rwp1-PK1
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.86495	32.6	-	CSIC01	37	3005	2877	3/23/15	3/4/17	Contig	SC	SAMEA1466462	GCA_001210845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/845/GCA_001210845.1_7907_4_59	-	USFL152
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92309	32.6	-	CSEN01	36	3088	2958	3/22/15	3/4/17	Contig	SC	SAMEA1324687	GCA_001210885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/885/GCA_001210885.1_7738_3_94	-	USFL280
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA392118	392118	Proteobacteria	Gammaproteobacteria	5.06341	51.9	-	NNAR01	192	5321	4880	8/21/17	8/23/17	Contig	University of Sao Paulo	SAMN07283712	GCA_002260565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/565/GCA_002260565.1_ASM226056v1	-	STy013
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.45263	50.3	-	NHXG01	323	5968	5453	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005889	GCA_002195815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/815/GCA_002195815.1_ASM219581v1	28550057	UMDUCD-O157-2016-S23
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36862	65.6	-	FPQB01	66	4270	4093	11/23/16	3/14/17	Scaffold	SC	SAMEA2682867	GCA_900121265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/265/GCA_900121265.1_14722_6_89	-	2926STDY5723619
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.13687	39.6	-	CROP01	59	2313	2049	3/23/15	3/11/17	Scaffold	SC	SAMEA1025673	GCA_001208045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/045/GCA_001208045.1_6755_6_1	-	SMRU1177
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.0661	39.6	-	CRDK01	98	2289	2073	3/23/15	3/11/17	Scaffold	SC	SAMEA1024641	GCA_001208085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/085/GCA_001208085.1_6731_4_13	-	SMRU1069
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37907	65.6	-	FPQD01	68	4285	4113	11/23/16	3/14/17	Scaffold	SC	SAMEA2682699	GCA_900121275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/275/GCA_900121275.1_14722_6_9	-	2926STDY5723449
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.41162	50.3	-	NHXM01	271	5899	5407	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005809	GCA_002195825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/825/GCA_002195825.1_ASM219582v1	28550057	UMDUCD-O157-2016-S17
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA391956	391956	Proteobacteria	Gammaproteobacteria	4.91941	52	-	NNAU01	94	5110	4747	8/21/17	8/23/17	Contig	University of Sao Paulo	SAMN07279158	GCA_002260805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/805/GCA_002260805.1_ASM226080v1	-	STy019
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.77116	32.7	-	CSLT01	52	2874	2707	3/23/15	3/4/17	Contig	SC	SAMEA1708818	GCA_001210925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/925/GCA_001210925.1_9061_8_88	-	BSAR870
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.90428	32.7	-	CSIS01	67	3108	2957	3/23/15	3/4/17	Contig	SC	SAMEA1324598	GCA_001210945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/945/GCA_001210945.1_7748_4_75	-	USFL073
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA391979	391979	Proteobacteria	Gammaproteobacteria	4.98092	51.9	-	NNAX01	161	5202	4773	8/21/17	8/23/17	Contig	University of Sao Paulo	SAMN07279711	GCA_002260985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/985/GCA_002260985.1_ASM226098v1	-	STy06
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.41205	50.3	-	NHXR01	303	5899	5397	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005814	GCA_002195875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/875/GCA_002195875.1_ASM219587v1	28550057	UMDUCD-O157-2016-S12
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36041	65.6	-	FPQF01	69	4261	4072	11/23/16	3/14/17	Scaffold	SC	SAMEA2682870	GCA_900121285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/285/GCA_900121285.1_14722_6_91	-	2926STDY5723622
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.13316	39.7	-	CQVP01	73	2306	2030	3/23/15	3/10/17	Scaffold	SC	SAMEA1025481	GCA_001208105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/105/GCA_001208105.1_6710_7_9	-	SMRU1377
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10725	39.7	-	CRML01	69	2266	2030	3/22/15	3/11/17	Scaffold	SC	SAMEA1025101	GCA_001208225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/225/GCA_001208225.1_6755_2_5	-	SMRU797
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32193	65.6	-	FPQE01	65	4245	4067	11/23/16	3/14/17	Scaffold	SC	SAMEA2682868	GCA_900121295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/295/GCA_900121295.1_14722_6_90	-	2926STDY5723620
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.42594	50.4	-	NHXP01	396	5925	5418	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005812	GCA_002195885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/885/GCA_002195885.1_ASM219588v1	28550057	UMDUCD-O157-2016-S14
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA391969	391969	Proteobacteria	Gammaproteobacteria	4.94536	52	-	NNAW01	152	5095	4788	8/21/17	8/23/17	Contig	University of Sao Paulo	SAMN07279560	GCA_002260995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/995/GCA_002260995.1_ASM226099v1	-	STy015
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.90318	32.7	-	CSAZ01	65	3100	2956	3/22/15	3/4/17	Contig	SC	SAMEA1324612	GCA_001210985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/985/GCA_001210985.1_7748_4_74	-	USFL072
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.83928	32.6	-	CSGG01	28	2980	2868	3/23/15	3/4/17	Contig	SC	SAMEA1466471	GCA_001211045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/045/GCA_001211045.1_7907_4_18	-	USFL112
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA391965	391965	Proteobacteria	Gammaproteobacteria	4.93375	52.1	-	NNAV01	178	5078	4813	8/21/17	8/23/17	Contig	University of Sao Paulo	SAMN07279397	GCA_002261025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/025/GCA_002261025.1_ASM226102v1	-	STy014
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.4772	50.3	-	NHXS01	326	6014	5499	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005815	GCA_002195895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/895/GCA_002195895.1_ASM219589v1	28550057	UMDUCD-O157-2016-S11
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35821	65.6	-	FPQG01	74	4263	4089	11/23/16	3/14/17	Scaffold	SC	SAMEA2682871	GCA_900121305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/305/GCA_900121305.1_14722_6_92	-	2926STDY5723623
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.1466	39.5	-	CROU01	49	2386	2145	3/23/15	3/10/17	Scaffold	SC	SAMEA1025270	GCA_001208305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/305/GCA_001208305.1_6755_6_15	-	SMRU1192
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09839	39.6	-	CRFK01	67	2317	2090	3/23/15	3/11/17	Scaffold	SC	SAMEA1025549	GCA_001208325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/325/GCA_001208325.1_6736_4_17	-	SMRU1217
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36659	65.6	-	FPQH01	81	4273	4086	11/23/16	3/14/17	Scaffold	SC	SAMEA2682872	GCA_900121315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/315/GCA_900121315.1_14722_6_93	-	2926STDY5723624
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.44743	50.3	-	NHXZ01	404	5948	5439	6/15/17	6/19/17	Contig	FDA/CFSAN	SAMN06005822	GCA_002195905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/195/905/GCA_002195905.1_ASM219590v1	28550057	UMDUCD-O157-2016-S4
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA392083	392083	Proteobacteria	Gammaproteobacteria	4.98825	52	-	NNAS01	252	5192	4801	8/21/17	8/23/17	Contig	University of Sao Paulo	SAMN07281162	GCA_002261035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/035/GCA_002261035.1_ASM226103v1	-	SF10
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.85537	32.6	-	CSJS01	37	2996	2874	3/23/15	3/4/17	Contig	SC	SAMEA1324580	GCA_001211085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/085/GCA_001211085.1_7748_4_91	-	USFL089
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.86345	32.6	-	CSDF01	26	2997	2878	3/23/15	3/4/17	Contig	SC	SAMEA1324579	GCA_001211185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/185/GCA_001211185.1_7738_4_49	-	USFL330
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA392098	392098	Proteobacteria	Gammaproteobacteria	4.99432	52	-	NNAT01	143	5171	4833	8/21/17	8/23/17	Contig	University of Sao Paulo	SAMN07281419	GCA_002261085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/261/085/GCA_002261085.1_ASM226108v1	-	SF12
Escherichia coli	562	PRJNA375849	375849	Proteobacteria	Gammaproteobacteria	5.07266	50.5	-	MVOT01	124	5260	4931	6/16/17	6/21/17	Contig	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN06346573	GCA_002196615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/615/GCA_002196615.1_ASM219661v1	-	E24
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36634	65.6	-	FPQI01	67	4268	4077	11/23/16	3/14/17	Scaffold	SC	SAMEA2682873	GCA_900121325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/325/GCA_900121325.1_14722_6_94	-	2926STDY5723625
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12858	39.6	-	CRAZ01	104	2295	2052	3/22/15	3/11/17	Scaffold	SC	SAMEA1024711	GCA_001208365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/365/GCA_001208365.1_6730_7_7	-	SMRU703
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.21722	39.5	-	CRWA01	56	2476	2239	3/23/15	3/10/17	Scaffold	SC	SAMEA1025451	GCA_001208425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/425/GCA_001208425.1_6807_1_13	-	SMRU1573
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36855	65.6	-	FPQJ01	78	4284	4088	11/23/16	3/14/17	Scaffold	SC	SAMEA2682874	GCA_900121335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/335/GCA_900121335.1_14722_6_95	-	2926STDY5723626
Escherichia coli	562	PRJNA375848	375848	Proteobacteria	Gammaproteobacteria	4.90875	50.7	-	MVOS01	179	5232	4763	6/16/17	6/21/17	Contig	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN06346572	GCA_002196625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/625/GCA_002196625.1_ASM219662v1	-	E11
Salmonella enterica subsp. enterica serovar Newport	108619	PRJNA308180	308180	Proteobacteria	Gammaproteobacteria	4.75203	52.2	-	NOVL01	51	4893	4622	8/22/17	8/24/17	Contig	FDA	SAMN05195920	GCA_002263135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/135/GCA_002263135.1_ASM226313v1	-	CFSAN051025
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.9238	32.6	-	CSIY01	29	3088	2958	3/23/15	3/4/17	Contig	SC	SAMEA1324614	GCA_001211265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/265/GCA_001211265.1_7738_3_85	-	USFL271
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88007	32.6	-	CSEC01	53	3025	2893	3/23/15	3/4/17	Contig	SC	SAMEA1324647	GCA_001211325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/325/GCA_001211325.1_7748_4_32	-	USFL031
"Salmonella enterica subsp. diarizonae serovar 16:z10:e,n,x,z15"	1911135	PRJNA308180	308180	Proteobacteria	Gammaproteobacteria	5.20792	52	-	NOVO01	56	5452	5152	8/22/17	8/24/17	Contig	FDA	SAMN05195938	GCA_002263275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/275/GCA_002263275.1_ASM226327v1	-	CFSAN051043
Escherichia coli	562	PRJNA375852	375852	Proteobacteria	Gammaproteobacteria	4.88506	50.8	-	MVOW01	112	5109	4729	6/16/17	6/21/17	Contig	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN06346576	GCA_002196635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/635/GCA_002196635.1_ASM219663v1	-	E47
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36469	65.6	-	FPQK01	77	4265	4072	11/23/16	3/14/17	Scaffold	SC	SAMEA2683073	GCA_900121345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/345/GCA_900121345.1_14722_7_1	-	2926STDY5723827
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.2209	39.5	-	CRUH01	83	2443	2180	3/22/15	3/10/17	Scaffold	SC	SAMEA1025309	GCA_001208605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/605/GCA_001208605.1_6805_5_5	-	SMRU1685
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11285	39.7	-	CQXX01	80	2333	2126	3/23/15	3/4/17	Scaffold	SC	SAMEA1024760	GCA_001208725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/725/GCA_001208725.1_6730_3_13	-	SMRU613
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36109	65.6	-	FPQL01	78	4276	4067	11/23/16	3/14/17	Scaffold	SC	SAMEA2683116	GCA_900121355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/355/GCA_900121355.1_14722_7_10	-	2926STDY5723870
Escherichia coli	562	PRJNA375850	375850	Proteobacteria	Gammaproteobacteria	5.04964	50.3	-	MVOU01	115	5361	4971	6/16/17	6/21/17	Contig	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN06346574	GCA_002196645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/645/GCA_002196645.1_ASM219664v1	-	E38
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA308180	308180	Proteobacteria	Gammaproteobacteria	5.16029	52	-	NOVM01	73	5402	5102	8/22/17	8/24/17	Contig	FDA	SAMN05195934	GCA_002263315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/315/GCA_002263315.1_ASM226331v1	-	CFSAN051039
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87875	32.6	-	CSHM01	53	3032	2896	3/23/15	3/4/17	Contig	SC	SAMEA1466478	GCA_001211485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/485/GCA_001211485.1_7907_4_3	-	USFL097
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92931	32.6	-	CSFK01	44	3099	2963	3/23/15	3/4/17	Contig	SC	SAMEA1324718	GCA_001211525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/525/GCA_001211525.1_7738_3_26	-	USFL213
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA308180	308180	Proteobacteria	Gammaproteobacteria	5.09553	52.1	-	NOVN01	65	5270	4961	8/22/17	8/24/17	Contig	FDA	SAMN05195936	GCA_002263325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/325/GCA_002263325.1_ASM226332v1	-	CFSAN051041
Escherichia coli	562	PRJNA375847	375847	Proteobacteria	Gammaproteobacteria	4.72498	50.7	-	MVOR01	109	4875	4527	6/16/17	6/21/17	Contig	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN06346571	GCA_002196735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/735/GCA_002196735.1_ASM219673v1	-	E4
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36721	65.6	-	FPQM01	76	4265	4080	11/23/16	3/14/17	Scaffold	SC	SAMEA2683117	GCA_900121365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/365/GCA_900121365.1_14722_7_11	-	2926STDY5723871
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99013	39.8	-	CRYH01	47	2188	1980	3/23/15	3/4/17	Scaffold	SC	SAMEA970237	GCA_001208845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/845/GCA_001208845.1_5242_7_5	-	BHN583
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.13455	39.7	-	CRGF01	52	2323	2106	3/23/15	3/4/17	Scaffold	SC	SAMEA1025258	GCA_001208865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/865/GCA_001208865.1_6736_5_23	-	SMRU1247
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35573	65.6	-	FPQN01	69	4264	4078	11/23/16	3/14/17	Scaffold	SC	SAMEA2683121	GCA_900121375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/375/GCA_900121375.1_14722_7_13	-	2926STDY5723875
Escherichia coli	562	PRJNA375851	375851	Proteobacteria	Gammaproteobacteria	4.82728	50.8	-	MVOV01	118	5019	4669	6/16/17	6/21/17	Contig	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN06346575	GCA_002196745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/745/GCA_002196745.1_ASM219674v1	-	E43
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA395602	395602	Proteobacteria	Gammaproteobacteria	5.00759	52.2	-	NOXI01	120	5269	4924	8/22/17	8/24/17	Contig	University of Saskatchewan	SAMN07411536	GCA_002264585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/585/GCA_002264585.1_A5-Miseq	-	D15-052810
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.85164	32.6	-	CSJA01	45	2999	2873	3/23/15	3/4/17	Contig	SC	SAMEA1324685	GCA_001211665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/665/GCA_001211665.1_7748_4_67	-	USFL066
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.84108	32.6	-	CSJO01	21	2975	2851	3/23/15	3/4/17	Contig	SC	SAMEA1466480	GCA_001211685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/685/GCA_001211685.1_7907_4_32	-	USFL125
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA395602	395602	Proteobacteria	Gammaproteobacteria	4.76705	52.3	-	NOXJ01	66	4943	4649	8/22/17	8/24/17	Contig	University of Saskatchewan	SAMN07411535	GCA_002264615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/615/GCA_002264615.1_A5-Miseq	-	D15-009047
Escherichia coli	562	PRJNA359210	359210	Proteobacteria	Gammaproteobacteria	4.60745	50.8	-	MSQA01	196	4819	4451	6/19/17	6/22/17	Contig	UMass Medical School	SAMN06189291	GCA_002197975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/975/GCA_002197975.1_ASM219797v1	28614372	ECOR13
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.34873	65.6	-	FPQP01	78	4282	4081	11/23/16	3/14/17	Scaffold	SC	SAMEA2683118	GCA_900121385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/385/GCA_900121385.1_14722_7_12	-	2926STDY5723872
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12544	39.5	-	CRVW01	143	2349	2100	3/23/15	3/11/17	Scaffold	SC	SAMEA1026104	GCA_001209285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/285/GCA_001209285.1_6805_7_3	-	SMRU1731
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.14425	39.5	-	CQUV01	68	2402	2140	3/22/15	3/11/17	Scaffold	SC	SAMEA1025592	GCA_001209305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/305/GCA_001209305.1_6710_6_5	-	46
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36303	65.6	-	FPQO01	73	4267	4079	11/23/16	3/14/17	Scaffold	SC	SAMEA2683124	GCA_900121395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/395/GCA_900121395.1_14722_7_15	-	2926STDY5723878
Escherichia coli	562	PRJNA359210	359210	Proteobacteria	Gammaproteobacteria	5.39378	50.3	-	MSPZ01	335	5768	5316	6/19/17	6/22/17	Contig	UMass Medical School	SAMN06189274	GCA_002198005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/005/GCA_002198005.1_ASM219800v1	28614372	PT29
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA395602	395602	Proteobacteria	Gammaproteobacteria	4.93492	52.1	-	NOXH01	66	5133	4844	8/22/17	8/24/17	Contig	University of Saskatchewan	SAMN07411537	GCA_002264665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/665/GCA_002264665.1_A5-Miseq	-	D15-043619
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87868	32.6	-	CSBU01	33	3017	2893	3/23/15	3/4/17	Contig	SC	SAMEA1466501	GCA_001211745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/745/GCA_001211745.1_7907_4_93	-	USFL185
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87583	32.6	-	CSEU01	37	3017	2893	3/23/15	3/4/17	Contig	SC	SAMEA1466508	GCA_001211825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/825/GCA_001211825.1_7907_4_40	-	USFL133
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA395602	395602	Proteobacteria	Gammaproteobacteria	4.77123	52.1	-	NOXL01	51	4897	4632	8/22/17	8/24/17	Contig	University of Saskatchewan	SAMN07411533	GCA_002264885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/885/GCA_002264885.1_A5-Miseq	-	618
Escherichia coli	562	PRJNA382335	382335	Proteobacteria	Gammaproteobacteria	4.75713	50.7	-	NIZE01	166	4949	4618	6/22/17	6/24/17	Contig	"Austrian Agency for Health and Food Safety, Vienna, Austria"	SAMN06703826	GCA_002205095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/095/GCA_002205095.1_ASM220509v1	-	4349
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36903	65.6	-	FPQQ01	81	4279	4081	11/23/16	3/14/17	Scaffold	SC	SAMEA2683123	GCA_900121405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/405/GCA_900121405.1_14722_7_14	-	2926STDY5723877
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08175	39.7	-	CRWD01	63	2295	2072	3/23/15	3/11/17	Scaffold	SC	SAMEA1025676	GCA_001209465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/465/GCA_001209465.1_6807_1_11	-	SMRU1571
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.1682	39.6	-	CRMT01	81	2334	2066	3/23/15	3/11/17	Scaffold	SC	SAMEA1024952	GCA_001209485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/485/GCA_001209485.1_6755_3_16	-	SMRU880
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36336	65.6	-	FPQR01	86	4276	4072	11/23/16	3/14/17	Scaffold	SC	SAMEA2683126	GCA_900121415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/415/GCA_900121415.1_14722_7_16	-	2926STDY5723880
Escherichia coli	562	PRJNA354882	354882	Proteobacteria	Gammaproteobacteria	4.93136	50.5	-	NBMR01	424	5182	4712	6/23/17	6/26/17	Contig	Universidad Nacional de Colombia	SAMN06052008	GCA_002205945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/205/945/GCA_002205945.1_ASM220594v1	-	IBUN901YEC
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA395602	395602	Proteobacteria	Gammaproteobacteria	4.99261	52.1	-	NOXK01	54	5198	4830	8/22/17	8/24/17	Contig	University of Saskatchewan	SAMN07411534	GCA_002264965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/965/GCA_002264965.1_A5-Miseq	-	D15-051537
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92084	32.7	-	CSGY01	28	3088	2957	3/22/15	3/4/17	Contig	SC	SAMEA1710093	GCA_001211885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/885/GCA_001211885.1_9266_1_19	-	FL373
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.8802	32.6	-	CSJW01	31	3028	2903	3/23/15	3/4/17	Contig	SC	SAMEA1324616	GCA_001211925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/925/GCA_001211925.1_7738_4_24	-	USFL305
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA395602	395602	Proteobacteria	Gammaproteobacteria	4.8796	52	-	NOXM01	61	5022	4750	8/22/17	8/24/17	Contig	University of Saskatchewan	SAMN07411532	GCA_002264985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/985/GCA_002264985.1_A5-Miseq	-	714
Escherichia coli O157	1045010	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.5655	50.5	-	NJEX01	2	5952	5414	6/23/17	6/26/17	Contig	US Food and Drug Administration 	SAMN06173305	GCA_002206405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/405/GCA_002206405.1_ASM220640v1	-	FDAARGOS_292
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36147	65.6	-	FPQS01	85	4286	4082	11/23/16	3/14/17	Scaffold	SC	SAMEA2683127	GCA_900121425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/425/GCA_900121425.1_14722_7_17	-	2926STDY5723881
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.22382	39.4	-	CRGR01	71	2467	2236	3/22/15	3/10/17	Scaffold	SC	SAMEA1025615	GCA_001209645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/645/GCA_001209645.1_6736_6_19	-	SMRU1267
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.06068	39.6	-	CRWY01	81	2291	2059	3/23/15	3/11/17	Scaffold	SC	SAMEA1025360	GCA_001209705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/705/GCA_001209705.1_6807_2_12	-	SMRU1596
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32342	65.6	-	FPQT01	86	4250	4051	11/23/16	3/14/17	Scaffold	SC	SAMEA2683132	GCA_900121435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/435/GCA_900121435.1_14722_7_19	-	2926STDY5723886
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.75266	50.6	-	BDRS01	69	4894	4520	6/7/17	6/28/17	Contig	SC	SAMEA1530979	GCA_002206665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/665/GCA_002206665.1_ASM220666v1	-	E811sc
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA395305	395305	Proteobacteria	Gammaproteobacteria	4.79349	52.2	-	NNSK01	149	4894	4614	8/22/17	8/24/17	Contig	"Institute for Microbiology and Epizootics, Freie University Berlin"	SAMN07375175	GCA_002265285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/285/GCA_002265285.1_ASM226528v1	-	Q1
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88619	32.6	-	CSJH01	30	3047	2922	3/22/15	3/4/17	Contig	SC	SAMEA1324574	GCA_001211965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/965/GCA_001211965.1_7748_4_59	-	USFL058
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.85024	32.6	-	CSDN01	30	2993	2869	3/23/15	3/4/17	Contig	SC	SAMEA1324719	GCA_001212005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/005/GCA_001212005.1_7738_3_58	-	USFL245
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	4.7973	51.7	-	NPES01	120	4903	4571	8/22/17	8/24/17	Contig	U.S. Food and Drug Administration	SAMN07421251	GCA_002265705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/705/GCA_002265705.1_ASM226570v1	-	SE89N
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.79088	50.7	-	BDRU01	36	4890	4633	6/7/17	6/28/17	Contig	SC	SAMEA1530989	GCA_002206705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/705/GCA_002206705.1_ASM220670v1	-	E710sc
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36154	65.6	-	FPQU01	68	4264	4076	11/23/16	3/14/17	Scaffold	SC	SAMEA2683074	GCA_900121445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/445/GCA_900121445.1_14722_7_2	-	2926STDY5723828
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.13628	39.5	-	CQWW01	149	2300	2081	3/22/15	3/11/17	Scaffold	SC	SAMEA1024805	GCA_001209905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/905/GCA_001209905.1_6714_7_7	-	SMRU751
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.20167	39.6	-	CRAR01	110	2421	2164	3/22/15	3/11/17	Scaffold	SC	SAMEA1024542	GCA_001210005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/005/GCA_001210005.1_6730_7_16	-	SMRU712
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37358	65.6	-	FPQX01	82	4281	4093	11/23/16	3/14/17	Scaffold	SC	SAMEA2683133	GCA_900121455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/455/GCA_900121455.1_14722_7_20	-	2926STDY5723887
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.83877	50.7	-	BDRV01	79	5062	4781	6/7/17	6/28/17	Contig	SC	SAMEA1531067	GCA_002206725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/725/GCA_002206725.1_ASM220672v1	-	E509sc
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	5.08122	51.8	-	NPEP01	98	5220	4935	8/22/17	8/24/17	Contig	U.S. Food and Drug Administration	SAMN07421183	GCA_002265745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/745/GCA_002265745.1_ASM226574v1	-	SE991
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.86656	32.6	-	CSDO01	37	3010	2877	3/23/15	3/4/17	Contig	SC	SAMEA1324725	GCA_001212085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/085/GCA_001212085.1_7738_3_12	-	USFL200
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87531	32.6	-	CSIA01	35	3015	2888	3/23/15	3/4/17	Contig	SC	SAMEA1324550	GCA_001212145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/145/GCA_001212145.1_7748_4_94	-	USFL092
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	5.18487	51.9	-	NPER01	158	5457	5044	8/22/17	8/24/17	Contig	U.S. Food and Drug Administration	SAMN07421232	GCA_002265805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/805/GCA_002265805.1_ASM226580v1	-	SE36N
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	5.15144	50.8	-	BDPC01	194	5487	5067	6/7/17	6/28/17	Contig	SC	SAMEA1317728	GCA_002206905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/905/GCA_002206905.1_ASM220690v1	-	E1604
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37777	65.6	-	FPQV01	70	4276	4094	11/23/16	3/14/17	Scaffold	SC	SAMEA2683135	GCA_900121465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/465/GCA_900121465.1_14722_7_22	-	2926STDY5723889
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.19569	39.7	-	CRFQ01	76	2455	2210	3/22/15	3/11/17	Scaffold	SC	SAMEA1025492	GCA_001210065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/065/GCA_001210065.1_6736_4_3	-	SMRU1203
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.1924	39.5	-	CQVI01	90	2413	2166	3/22/15	3/11/17	Scaffold	SC	SAMEA1025381	GCA_001210085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/085/GCA_001210085.1_6710_7_3	-	38
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3679	65.6	-	FPQW01	74	4270	4091	11/23/16	3/14/17	Scaffold	SC	SAMEA2683136	GCA_900121475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/475/GCA_900121475.1_14722_7_23	-	2926STDY5723890
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	4.7069	50.8	-	BDPH01	69	4841	4552	6/7/17	6/28/17	Contig	SC	SAMEA1317740	GCA_002207005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/005/GCA_002207005.1_ASM220700v1	-	E513
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	5.30606	51.8	-	NPEQ01	111	5507	5202	8/22/17	8/24/17	Contig	U.S. Food and Drug Administration	SAMN07421215	GCA_002265815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/815/GCA_002265815.1_ASM226581v1	-	SE144
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.874	32.6	-	CSJQ01	27	3023	2893	3/22/15	3/4/17	Contig	SC	SAMEA1710091	GCA_001212225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/225/GCA_001212225.1_9266_1_18	-	FL372
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92583	32.7	-	CSJB01	31	3087	2961	3/23/15	3/4/17	Contig	SC	SAMEA1324538	GCA_001212245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/245/GCA_001212245.1_7738_3_44	-	USFL231
Salmonella enterica subsp. enterica serovar Carno	2024268	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.76239	52	-	NPLO01	26	4824	4547	8/22/17	8/24/17	Contig	Center for Food Safety and Applied Nutrition	SAMN07163935	GCA_002265865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/865/GCA_002265865.1_ASM226586v1	-	CFSAN059903
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	4.88812	50.6	-	BDPI01	106	5094	4776	6/7/17	6/28/17	Contig	SC	SAMEA1317743	GCA_002207025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/025/GCA_002207025.1_ASM220702v1	-	E1647
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36658	65.6	-	FPQY01	79	4277	4088	11/23/16	3/14/17	Scaffold	SC	SAMEA2683137	GCA_900121485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/485/GCA_900121485.1_14722_7_24	-	2926STDY5723891
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14418	39.6	-	CQYN01	64	2362	2107	3/23/15	3/4/17	Scaffold	SC	SAMEA1024976	GCA_001210245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/245/GCA_001210245.1_6730_3_9	-	SMRU609
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99277	39.7	-	CRYN01	41	2208	1993	3/22/15	3/11/17	Scaffold	SC	SAMEA970244	GCA_001210345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/345/GCA_001210345.1_5242_7_12	-	BHN589
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36515	65.6	-	FPRE01	80	4277	4075	11/23/16	3/14/17	Scaffold	SC	SAMEA2683138	GCA_900121495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/495/GCA_900121495.1_14722_7_25	-	2926STDY5723892
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	5.02551	50.5	-	BDPP01	169	5392	4957	6/7/17	6/28/17	Contig	SC	SAMEA1317770	GCA_002207165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/165/GCA_002207165.1_ASM220716v1	-	E1574
Salmonella enterica subsp. enterica serovar Ealing	1962638	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.67739	52.2	-	NPLR01	39	4733	4466	8/22/17	8/24/17	Contig	Center for Food Safety and Applied Nutrition	SAMN07163938	GCA_002265925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/925/GCA_002265925.1_ASM226592v1	-	CFSAN059900
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.84744	32.6	-	CSFY01	34	2985	2866	3/22/15	3/4/17	Contig	SC	SAMEA1466538	GCA_001212305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/305/GCA_001212305.1_7907_4_68	-	USFL161
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87771	32.6	-	CSCZ01	32	3019	2899	3/22/15	3/4/17	Contig	SC	SAMEA1466526	GCA_001212365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/365/GCA_001212365.1_7907_4_88	-	USFL180
Salmonella enterica subsp. enterica serovar Altendorf	2024270	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.26649	51.8	-	NPLT01	102	5450	5028	8/22/17	8/24/17	Contig	Center for Food Safety and Applied Nutrition	SAMN07163941	GCA_002265935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/935/GCA_002265935.1_ASM226593v1	-	CFSAN059897
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	5.01811	50.6	-	BDPR01	115	5204	4849	6/7/17	6/28/17	Contig	SC	SAMEA1317784	GCA_002207205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/205/GCA_002207205.1_ASM220720v1	-	E1282
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37894	65.6	-	FPQZ01	73	4286	4097	11/23/16	3/14/17	Scaffold	SC	SAMEA2683143	GCA_900121505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/505/GCA_900121505.1_14722_7_26	-	2926STDY5723897
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.24442	39.4	-	CQXA01	197	2479	2227	3/22/15	3/4/17	Scaffold	SC	SAMEA1023702	GCA_001210365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/365/GCA_001210365.1_6714_8_18	-	SMRU570
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.16569	39.5	-	CQXB01	141	2408	2171	3/23/15	3/4/17	Scaffold	SC	SAMEA1023900	GCA_001210405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/405/GCA_001210405.1_6714_8_16	-	SMRU568
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32428	65.6	-	FPRB01	78	4244	4073	11/23/16	3/14/17	Scaffold	SC	SAMEA2682674	GCA_900121515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/515/GCA_900121515.1_14722_7_30	-	2926STDY5723424
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	4.80032	50.7	-	BDPS01	176	4972	4609	6/7/17	6/28/17	Contig	SC	SAMEA1317785	GCA_002207225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/225/GCA_002207225.1_ASM220722v1	-	E705
Salmonella enterica subsp. enterica serovar Ekotedo	2024269	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73951	52.1	-	NPLQ01	33	4821	4565	8/22/17	8/24/17	Contig	Center for Food Safety and Applied Nutrition	SAMN07163937	GCA_002265965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/965/GCA_002265965.1_ASM226596v1	-	CFSAN059901
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.7685	32.7	-	CSCL01	31	2892	2778	3/23/15	3/4/17	Contig	SC	SAMEA1324711	GCA_001212425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/425/GCA_001212425.1_7748_4_49	-	USFL048
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.84931	32.6	-	CSCE01	31	2995	2870	3/23/15	3/4/17	Contig	SC	SAMEA1324590	GCA_001212445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/445/GCA_001212445.1_7738_3_67	-	USFL254
Salmonella enterica subsp. enterica serovar Glostrup	1151180	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.63767	52.2	-	NPLP01	30	4690	4429	8/22/17	8/24/17	Contig	Center for Food Safety and Applied Nutrition	SAMN07163936	GCA_002265975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/975/GCA_002265975.1_ASM226597v1	-	CFSAN059902
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	4.7221	50.8	-	BDPT01	66	4840	4586	6/7/17	6/28/17	Contig	SC	SAMEA1317793	GCA_002207245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/245/GCA_002207245.1_ASM220724v1	-	E1638
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36527	65.6	-	FPRD01	77	4276	4080	11/23/16	3/14/17	Scaffold	SC	SAMEA2682673	GCA_900121525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/525/GCA_900121525.1_14722_7_29	-	2926STDY5723423
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.986	39.8	-	CRYD01	44	2198	1986	3/23/15	3/4/17	Scaffold	SC	SAMEA970242	GCA_001210465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/465/GCA_001210465.1_5242_7_11	-	BHN588
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.1563	39.6	-	CRBW01	88	2334	2114	3/23/15	3/4/17	Scaffold	SC	SAMEA1024874	GCA_001210585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/585/GCA_001210585.1_6731_1_22	-	SMRU1006
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36073	65.5	-	FPRC01	91	4299	4063	11/23/16	3/14/17	Scaffold	SC	SAMEA2683145	GCA_900121535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/535/GCA_900121535.1_14722_7_27	-	2926STDY5723899
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	4.98314	50.5	-	BDPV01	72	5207	4790	6/7/17	6/28/17	Contig	SC	SAMEA1317810	GCA_002207285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/285/GCA_002207285.1_ASM220728v1	-	E1637
Salmonella enterica subsp. enterica serovar Plymouth	2024272	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.93724	52	-	NPLW01	53	5097	4774	8/22/17	8/24/17	Contig	Center for Food Safety and Applied Nutrition	SAMN07163944	GCA_002265985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/985/GCA_002265985.1_ASM226598v1	-	CFSAN059894
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.78674	32.7	-	CSSF01	53	2850	2712	3/23/15	3/4/17	Contig	SC	SAMEA1463304	GCA_001212545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/545/GCA_001212545.1_7907_7_73	-	BSAR177_2
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.91744	32.7	-	CSEE01	32	3082	2955	3/23/15	3/4/17	Contig	SC	SAMEA1466541	GCA_001212565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/565/GCA_001212565.1_7907_4_84	-	USFL176
Salmonella enterica subsp. enterica serovar Tees	2024266	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.68963	52.1	-	NPLY01	42	4769	4471	8/22/17	8/24/17	Contig	Center for Food Safety and Applied Nutrition	SAMN07162989	GCA_002265995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/995/GCA_002265995.1_ASM226599v1	-	CFSAN059891
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	5.01933	50.8	-	BDPW01	224	5311	4967	6/7/17	6/28/17	Contig	SC	SAMEA1317814	GCA_002207305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/305/GCA_002207305.1_ASM220730v1	-	E819
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36714	65.6	-	FPRA01	71	4272	4086	11/23/16	3/14/17	Scaffold	SC	SAMEA2683080	GCA_900121545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/545/GCA_900121545.1_14722_7_3	-	2926STDY5723834
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.97439	39.8	-	CRYQ01	64	2166	1973	3/23/15	3/4/17	Scaffold	SC	SAMEA970254	GCA_001210605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/605/GCA_001210605.1_5242_8_2	-	BHN591
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.15058	39.5	-	CRXL01	65	2384	2150	3/23/15	3/11/17	Scaffold	SC	SAMEA1025307	GCA_001210745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/745/GCA_001210745.1_6807_2_9	-	SMRU1593
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3711	65.6	-	FPRF01	75	4272	4081	11/23/16	3/14/17	Scaffold	SC	SAMEA2682675	GCA_900121555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/555/GCA_900121555.1_14722_7_31	-	2926STDY5723425
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	4.72493	50.7	-	BDPX01	67	4848	4537	6/7/17	6/28/17	Contig	SC	SAMEA1317815	GCA_002207325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/325/GCA_002207325.1_ASM220732v1	-	E620
Salmonella enterica subsp. enterica serovar Takoradi	2024267	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.66794	52.1	-	NPMA01	26	4712	4448	8/22/17	8/24/17	Contig	Center for Food Safety and Applied Nutrition	SAMN07162990	GCA_002266045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/045/GCA_002266045.1_ASM226604v1	-	CFSAN059889
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92198	32.7	-	CSHE01	34	3092	2960	3/23/15	3/4/17	Contig	SC	SAMEA1324521	GCA_001212585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/585/GCA_001212585.1_7738_3_72	-	USFL258
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87891	32.6	-	CSHG01	25	3019	2895	3/22/15	3/4/17	Contig	SC	SAMEA1324710	GCA_001212605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/605/GCA_001212605.1_7738_3_76	-	USFL262
Salmonella enterica subsp. enterica serovar Bere	2024271	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.72981	52.2	-	NPLU01	36	4762	4499	8/22/17	8/24/17	Contig	Center for Food Safety and Applied Nutrition	SAMN07163942	GCA_002266055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/055/GCA_002266055.1_ASM226605v1	-	CFSAN059896
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	5.11898	50.6	-	BDPY01	313	5485	5010	6/7/17	6/28/17	Contig	SC	SAMEA1317817	GCA_002207345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/345/GCA_002207345.1_ASM220734v1	-	E1581
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3258	65.6	-	FPRI01	83	4248	4066	11/23/16	3/14/17	Scaffold	SC	SAMEA2682677	GCA_900121565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/565/GCA_900121565.1_14722_7_32	-	2926STDY5723427
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.98679	39.8	-	CRYI01	46	2198	1983	3/23/15	3/11/17	Scaffold	SC	SAMEA970233	GCA_001211545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/545/GCA_001211545.1_5242_7_7	-	BHN584
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09169	39.7	-	CRXC01	59	2311	2092	3/23/15	3/4/17	Scaffold	SC	SAMEA1025391	GCA_001212105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/105/GCA_001212105.1_6807_2_14	-	SMRU1598
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36604	65.6	-	FPRL01	81	4271	4084	11/23/16	3/14/17	Scaffold	SC	SAMEA2682679	GCA_900121575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/575/GCA_900121575.1_14722_7_34	-	2926STDY5723429
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	4.63629	50.7	-	BDRC01	80	4828	4497	6/7/17	6/28/17	Contig	SC	SAMEA1317839	GCA_002207425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/425/GCA_002207425.1_ASM220742v1	-	E828
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.87658	52.1	-	NPLS01	33	5044	4717	8/22/17	8/24/17	Contig	Center for Food Safety and Applied Nutrition	SAMN07163940	GCA_002266085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/085/GCA_002266085.1_ASM226608v1	-	CFSAN059898
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.85544	32.6	-	CSHL01	27	2999	2872	3/23/15	3/4/17	Contig	SC	SAMEA1324530	GCA_001212685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/685/GCA_001212685.1_7738_4_69	-	USFL350
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88976	32.6	-	CSJX01	63	3037	2897	3/22/15	3/4/17	Contig	SC	SAMEA1324552	GCA_001212745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/745/GCA_001212745.1_7748_4_58	-	USFL057
Salmonella enterica subsp. enterica serovar Ekotedo	2024269	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.63725	52.2	-	NPLZ01	42	4697	4426	8/22/17	8/24/17	Contig	Center for Food Safety and Applied Nutrition	SAMN07163946	GCA_002266095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/095/GCA_002266095.1_ASM226609v1	-	CFSAN059890
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	5.00053	50.5	-	BDRF01	122	5235	4810	6/7/17	6/28/17	Contig	SC	SAMEA1317854	GCA_002207485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/485/GCA_002207485.1_ASM220748v1	-	E1623
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.31719	65.6	-	FPRM01	65	4247	4059	11/23/16	3/14/17	Scaffold	SC	SAMEA2682678	GCA_900121585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/585/GCA_900121585.1_14722_7_33	-	2926STDY5723428
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.98947	39.8	-	CRXS01	42	2212	2004	3/23/15	3/4/17	Scaffold	SC	SAMEA970272	GCA_001212125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/125/GCA_001212125.1_5242_6_2	-	BHN413
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07063	39.7	-	CRXQ01	55	2271	2059	3/23/15	3/4/17	Scaffold	SC	SAMEA1025280	GCA_001212205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/205/GCA_001212205.1_6807_3_1	-	SMRU1609
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36738	65.6	-	FPRH01	76	4276	4086	11/23/16	3/14/17	Scaffold	SC	SAMEA2682680	GCA_900121595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/595/GCA_900121595.1_14722_7_35	-	2926STDY5723430
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	4.77641	50.5	-	BDRH01	101	4964	4625	6/7/17	6/28/17	Contig	SC	SAMEA1317863	GCA_002207525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/525/GCA_002207525.1_ASM220752v1	-	E1650
Salmonella enterica subsp. enterica serovar Hato	2017678	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69433	52.2	-	NPLV01	31	4736	4478	8/22/17	8/24/17	Contig	Center for Food Safety and Applied Nutrition	SAMN07163943	GCA_002266125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/125/GCA_002266125.1_ASM226612v1	-	CFSAN059895
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92708	32.6	-	CSJI01	44	3099	2968	3/22/15	3/4/17	Contig	SC	SAMEA1466510	GCA_001212765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/765/GCA_001212765.1_7907_4_91	-	USFL183
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.78012	32.6	-	CSIM01	32	2904	2790	3/23/15	3/4/17	Contig	SC	SAMEA1466477	GCA_001212785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/785/GCA_001212785.1_7907_4_62	-	USFL155
Salmonella enterica subsp. enterica serovar Bergen	260368	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.65807	52.2	-	NPLX01	46	4774	4491	8/22/17	8/24/17	Contig	Center for Food Safety and Applied Nutrition	SAMN07163945	GCA_002266135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/135/GCA_002266135.1_ASM226613v1	-	CFSAN059892
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	5.17541	50.5	-	BDRI01	153	5524	5054	6/7/17	6/28/17	Contig	SC	SAMEA1317881	GCA_002207545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/545/GCA_002207545.1_ASM220754v1	-	E1102
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36669	65.5	-	FPRG01	86	4276	4072	11/23/16	3/14/17	Scaffold	SC	SAMEA2682682	GCA_900121605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/605/GCA_900121605.1_14722_7_36	-	2926STDY5723432
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.06179	39.5	-	CRXE01	73	2263	2045	3/23/15	3/11/17	Scaffold	SC	SAMEA1025512	GCA_001212725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/725/GCA_001212725.1_6807_2_22	-	SMRU1606
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.98662	39.8	-	CSTL01	38	2216	1997	3/24/15	3/11/17	Scaffold	SC	SAMEA970288	GCA_001212925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/925/GCA_001212925.1_5242_7_4	-	BHN582
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36857	65.6	-	FPRJ01	71	4283	4087	11/23/16	3/14/17	Scaffold	SC	SAMEA2682684	GCA_900121615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/615/GCA_900121615.1_14722_7_37	-	2926STDY5723434
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	5.20138	50.5	-	BDRJ01	154	5485	5064	6/7/17	6/28/17	Contig	SC	SAMEA1317887	GCA_002207565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/565/GCA_002207565.1_ASM220756v1	-	E390
Salmonella enterica subsp. indica serovar Marseille	1964831	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69658	52.2	-	NPMC01	46	4785	4507	8/22/17	8/24/17	Contig	Center for Food Safety and Applied Nutrition	SAMN07163948	GCA_002266165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/165/GCA_002266165.1_ASM226616v1	-	CFSAN059887
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.80104	32.7	-	CUAS01	29	2895	2753	3/31/15	3/4/17	Contig	SC	SAMEA1030338	GCA_001223785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/785/GCA_001223785.1_6401_7_12	-	91/10795
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.8527	32.7	-	CTZP01	91	2979	2841	3/31/15	3/4/17	Contig	SC	SAMEA862622	GCA_001223825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/825/GCA_001223825.1_5364_6_8	-	HU8
Salmonella enterica subsp. enterica serovar Sundsvall	2024273	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.56244	52.2	-	NPMB01	31	4636	4378	8/22/17	8/24/17	Contig	Center for Food Safety and Applied Nutrition	SAMN07163947	GCA_002266175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/175/GCA_002266175.1_ASM226617v1	-	CFSAN059888
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	4.70905	50.8	-	BDRN01	75	4857	4526	6/7/17	6/28/17	Contig	SC	SAMEA1317900	GCA_002207645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/645/GCA_002207645.1_ASM220764v1	-	E626
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32486	65.6	-	FPRK01	83	4244	4062	11/23/16	3/14/17	Scaffold	SC	SAMEA2682685	GCA_900121625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/625/GCA_900121625.1_14722_7_38	-	2926STDY5723435
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.29119	39.6	-	CWJH01	170	2543	2267	7/8/15	3/14/17	Scaffold	SC	SAMEA2061936	GCA_001244585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/244/585/GCA_001244585.1_9803_7_71	-	6B
Streptococcus pneumoniae	1313	PRJNA289436	289436	Terrabacteria group	Firmicutes	2.11068	39.7	-	LHAF01	91	2320	2043	8/7/15	3/11/17	Scaffold	National Institute for Communicable Diseases	SAMN03890248	GCA_001263055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/055/GCA_001263055.1_ASM126305v1	27342074	Case B non-serotyeable
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36326	65.6	-	FPRO01	107	4289	4081	11/23/16	3/14/17	Scaffold	SC	SAMEA2682687	GCA_900121635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/635/GCA_900121635.1_14722_7_39	-	2926STDY5723437
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	4.95919	50.4	-	BDRO01	107	5225	4792	6/7/17	6/28/17	Contig	SC	SAMEA1317908	GCA_002207665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/665/GCA_002207665.1_ASM220766v1	-	E855
Salmonella enterica subsp. enterica serovar Eastbourne	486993	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.53564	52.2	-	NPMG01	25	4608	4350	8/22/17	8/24/17	Contig	Center for Food Safety and Applied Nutrition	SAMN07163931	GCA_002266205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/205/GCA_002266205.1_ASM226620v1	-	CFSAN059883
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.87069	32.6	-	CTXB01	131	3023	2865	3/31/15	3/4/17	Contig	SC	SAMEA862629	GCA_001224305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/305/GCA_001224305.1_5139_6_4	-	IU17
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.73319	32.7	-	CUBD01	31	2802	2663	3/31/15	3/4/17	Contig	SC	SAMEA1030240	GCA_001224365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/365/GCA_001224365.1_6401_7_20	-	HO 7286 0467 05
Salmonella enterica subsp. enterica serovar Give	46626	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.61639	52.2	-	NPME01	25	4696	4447	8/22/17	8/24/17	Contig	Center for Food Safety and Applied Nutrition	SAMN07163929	GCA_002266215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/215/GCA_002266215.1_ASM226621v1	-	CFSAN059885
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	5.07327	50.4	-	BDRP01	188	5437	4933	6/7/17	6/28/17	Contig	SC	SAMEA1317911	GCA_002207685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/685/GCA_002207685.1_ASM220768v1	-	E628
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36654	65.6	-	FPRN01	78	4270	4079	11/23/16	3/14/17	Scaffold	SC	SAMEA2683085	GCA_900121645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/645/GCA_900121645.1_14722_7_4	-	2926STDY5723839
Streptococcus pneumoniae	1313	PRJNA289436	289436	Terrabacteria group	Firmicutes	2.02346	39.8	-	LHAG01	33	2234	2006	8/7/15	3/15/17	Scaffold	National Institute for Communicable Diseases	SAMN03890254	GCA_001263085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/085/GCA_001263085.1_ASM126308v1	27342074	Case A non-serotyeable
Streptococcus pneumoniae	1313	PRJEB2632	204208	Terrabacteria group	Firmicutes	2.05168	39.5	-	CFIV02	259	2176	1982	3/15/15	3/11/17	Scaffold	SC	SAMEA1463090	GCA_001301375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/301/375/GCA_001301375.2_7553_5_84	-	PT8065
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37124	65.6	-	FPRP01	76	4281	4096	11/23/16	3/14/17	Scaffold	SC	SAMEA2682691	GCA_900121655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/655/GCA_900121655.1_14722_7_40	-	2926STDY5723441
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	5.16016	50.5	-	BDRQ01	150	5413	5065	6/7/17	6/28/17	Contig	SC	SAMEA1317912	GCA_002207705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/705/GCA_002207705.1_ASM220770v1	-	E1534
Salmonella enterica subsp. enterica serovar Stanleyville	286782	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69778	52.2	-	NPMH01	34	4767	4535	8/22/17	8/24/17	Contig	Center for Food Safety and Applied Nutrition	SAMN07163932	GCA_002266245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/245/GCA_002266245.1_ASM226624v1	-	CFSAN059882
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.80584	32.7	-	CTZW01	24	2905	2750	3/31/15	3/4/17	Contig	SC	SAMEA1030276	GCA_001224445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/445/GCA_001224445.1_6401_6_12	-	F827 28
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.86903	32.7	-	CTYT01	78	3012	2874	3/31/15	3/4/17	Contig	SC	SAMEA862558	GCA_001224505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/505/GCA_001224505.1_5364_2_3	-	DEU15
Salmonella enterica subsp. enterica serovar Johannesburg	913076	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.61648	52.2	-	NPMJ01	48	4748	4465	8/22/17	8/24/17	Contig	Center for Food Safety and Applied Nutrition	SAMN07163934	GCA_002266255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/255/GCA_002266255.1_ASM226625v1	-	CFSAN059880
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	4.95854	51	-	BDRR01	181	5349	4892	6/7/17	6/28/17	Contig	SC	SAMEA1317914	GCA_002207725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/725/GCA_002207725.1_ASM220772v1	-	E949
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37846	65.6	-	FPRQ01	85	4285	4093	11/23/16	3/14/17	Scaffold	SC	SAMEA2682692	GCA_900121665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/665/GCA_900121665.1_14722_7_41	-	2926STDY5723442
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.07444	39.7	-	CFKY01	90	2277	2097	3/15/15	3/11/17	Scaffold	SC	SAMEA769994	GCA_001326295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/295/GCA_001326295.1_5242_3_10	-	18C/2
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.05544	39.7	-	CHJU01	56	2241	2054	4/21/15	3/11/17	Scaffold	SC	SAMEA769998	GCA_001326315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/315/GCA_001326315.1_5310_1_10	-	18C/3
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37105	65.6	-	FPRR01	73	4277	4089	11/23/16	3/14/17	Scaffold	SC	SAMEA2682693	GCA_900121675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/675/GCA_900121675.1_14722_7_42	-	2926STDY5723443
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	4.96131	50.6	-	BDPB01	109	5266	4845	6/7/17	6/28/17	Contig	SC	SAMEA1317724	GCA_002207745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/745/GCA_002207745.1_ASM220774v1	-	E1525
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.91574	52.2	-	NPMD01	43	5027	4743	8/22/17	8/24/17	Contig	Center for Food Safety and Applied Nutrition	SAMN07163928	GCA_002266305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/305/GCA_002266305.1_ASM226630v1	-	CFSAN059886
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.90981	32.7	-	CTYE01	160	3091	2906	3/31/15	3/4/17	Contig	SC	SAMEA862564	GCA_001224565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/565/GCA_001224565.1_5295_1_2	-	MU4
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.9074	32.7	-	CTWO01	88	3068	2917	3/31/15	3/4/17	Contig	SC	SAMEA862659	GCA_001224705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/705/GCA_001224705.1_5083_7_12	-	IU13
Salmonella enterica subsp. enterica serovar Agoueve	1505961	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74398	52.2	-	NPMF01	54	4813	4508	8/22/17	8/24/17	Contig	Center for Food Safety and Applied Nutrition	SAMN07163930	GCA_002266315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/315/GCA_002266315.1_ASM226631v1	-	CFSAN059884
Escherichia coli	562	PRJNA381224	381224	Proteobacteria	Gammaproteobacteria	5.36211	50.4	-	NBSF01	366	5477	5094	6/26/17	6/28/17	Contig	University of Sao Paulo	SAMN06672339	GCA_002207985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/985/GCA_002207985.1_ASM220798v1	-	Ec39590
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32339	65.6	-	FPRS01	88	4245	4061	11/23/16	3/14/17	Scaffold	SC	SAMEA2682694	GCA_900121685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/685/GCA_900121685.1_14722_7_43	-	2926STDY5723444
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	1.95173	39.8	-	CGGD01	93	2119	1909	3/15/15	3/11/17	Scaffold	SC	SAMEA770004	GCA_001326355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/355/GCA_001326355.1_5242_2_2	-	7F/3
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	1.97311	39.7	-	CGBO01	55	2149	1964	3/15/15	3/11/17	Scaffold	SC	SAMEA770005	GCA_001326375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/375/GCA_001326375.1_5242_2_1	-	7F/2
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36552	65.6	-	FPRT01	67	4266	4086	11/23/16	3/14/17	Scaffold	SC	SAMEA2682695	GCA_900121695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/695/GCA_900121695.1_14722_7_44	-	2926STDY5723445
Escherichia coli	562	PRJNA381221	381221	Proteobacteria	Gammaproteobacteria	4.81818	50.6	-	NBSE01	118	5015	4663	6/26/17	6/28/17	Contig	University of Sao Paulo	SAMN06672338	GCA_002208025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/025/GCA_002208025.1_ASM220802v1	-	ECC8
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.703	52.2	-	NPMI01	41	4773	4546	8/22/17	8/24/17	Contig	Center for Food Safety and Applied Nutrition	SAMN07163933	GCA_002266325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/325/GCA_002266325.1_ASM226632v1	-	CFSAN059881
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.88816	32.7	-	CTWR01	80	3044	2909	3/31/15	3/4/17	Contig	SC	SAMEA862615	GCA_001224725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/725/GCA_001224725.1_5119_1_8	-	NA32
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.80981	32.7	-	CUBW01	26	2940	2757	3/31/15	3/4/17	Contig	SC	SAMEA1030332	GCA_001224765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/765/GCA_001224765.1_6437_8_2	-	RH 0600 0064 09
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA388813	388813	Proteobacteria	Gammaproteobacteria	4.78374	52.2	-	NIDH01	362	4959	4621	8/25/17	8/28/17	Contig	University of Sao Paulo	SAMN07187210	GCA_002270065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/270/065/GCA_002270065.1_ASM227006v1	-	SI05
Escherichia coli	562	PRJNA326931	326931	Proteobacteria	Gammaproteobacteria	5.34741	50.7	-	NHTF01	83	5689	5215	6/30/17	7/3/17	Contig	National Animal Disease Center / ARS / USDA	SAMN07125105	GCA_002212055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/055/GCA_002212055.1_ASM221205v1	-	ECA-B
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36332	65.6	-	FPRU01	69	4270	4077	11/23/16	3/14/17	Scaffold	SC	SAMEA2682696	GCA_900121705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/705/GCA_900121705.1_14722_7_45	-	2926STDY5723446
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.01404	39.7	-	CIFD01	96	2176	1984	4/21/15	3/11/17	Scaffold	SC	SAMEA770008	GCA_001326395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/395/GCA_001326395.1_5192_8_10	-	23A/2
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.01749	39.7	-	CFNU01	95	2188	1991	3/15/15	3/11/17	Scaffold	SC	SAMEA770010	GCA_001326415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/415/GCA_001326415.1_5192_8_8	-	14/2
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37151	65.6	-	FPRV01	74	4278	4082	11/23/16	3/14/17	Scaffold	SC	SAMEA2682698	GCA_900121715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/715/GCA_900121715.1_14722_7_47	-	2926STDY5723448
Escherichia coli	562	PRJNA326931	326931	Proteobacteria	Gammaproteobacteria	4.86055	50.7	-	NHZH01	78	5001	4672	6/30/17	7/3/17	Contig	National Animal Disease Center / ARS / USDA	SAMN07125106	GCA_002212065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/065/GCA_002212065.1_ASM221206v1	-	ECC-M
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA388805	388805	Proteobacteria	Gammaproteobacteria	4.98928	52	-	NIDG01	338	5133	4817	8/25/17	8/28/17	Contig	University of Sao Paulo	SAMN07185697	GCA_002270095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/270/095/GCA_002270095.1_ASM227009v1	-	STy13
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.92702	32.6	-	CTWK01	157	3094	2922	3/31/15	3/4/17	Contig	SC	SAMEA862630	GCA_001224785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/785/GCA_001224785.1_5083_6_3	-	HU15
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	3.00635	32.6	-	CTXS01	139	3197	3055	3/31/15	3/4/17	Contig	SC	SAMEA862549	GCA_001224885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/885/GCA_001224885.1_5139_7_7	-	M418
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA389454	389454	Proteobacteria	Gammaproteobacteria	4.9341	52	-	NIJH01	179	5139	4795	8/25/17	8/28/17	Contig	University of Sao Paulo	SAMN07199592	GCA_002270265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/270/265/GCA_002270265.1_ASM227026v1	-	STy018
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.15072	50.7	-	NACH01	154	5459	5010	6/30/17	7/3/17	Contig	US Food and Drug Administration	SAMN05789719	GCA_002212785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/785/GCA_002212785.1_ASM221278v1	-	KCJK1791
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36836	65.6	-	FPRW01	81	4267	4075	11/23/16	3/14/17	Scaffold	SC	SAMEA2682701	GCA_900121725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/725/GCA_900121725.1_14722_7_48	-	2926STDY5723451
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.01274	39.6	-	CGAL01	116	2170	1996	3/15/15	3/11/17	Scaffold	SC	SAMEA770025	GCA_001326435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/435/GCA_001326435.1_5242_2_12	-	19F/11
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.00608	39.6	-	CHCV01	57	2175	2001	4/21/15	3/11/17	Scaffold	SC	SAMEA770050	GCA_001326455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/455/GCA_001326455.1_5310_1_2	-	14/3
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37939	65.6	-	FPRX01	63	4283	4110	11/23/16	3/14/17	Scaffold	SC	SAMEA2682702	GCA_900121735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/735/GCA_900121735.1_14722_7_49	-	2926STDY5723452
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.01636	50.4	-	NACI01	99	5253	4857	6/30/17	7/3/17	Contig	US Food and Drug Administration	SAMN05757713	GCA_002212805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/805/GCA_002212805.1_ASM221280v1	-	KCJK1886
Salmonella enterica subsp. enterica serovar Senftenberg	28150	PRJNA390262	390262	Proteobacteria	Gammaproteobacteria	4.8003	52.1	-	NITT01	107	4927	4574	8/25/17	8/28/17	Contig	Technion	SAMN07227119	GCA_002270335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/270/335/GCA_002270335.1_ASM227033v1	-	LASS
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.89949	32.7	-	CTZC01	78	3073	2906	3/31/15	3/4/17	Contig	SC	SAMEA862569	GCA_001225125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/125/GCA_001225125.1_5364_5_11	-	MU1
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.85444	32.7	-	CTWT01	144	2994	2832	3/31/15	3/4/17	Contig	SC	SAMEA862534	GCA_001225305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/305/GCA_001225305.1_5139_6_5	-	IU18
Salmonella enterica subsp. enterica serovar Senftenberg	28150	PRJNA391794	391794	Proteobacteria	Gammaproteobacteria	4.82202	52.1	-	NJPX01	197	5002	4569	8/25/17	8/28/17	Contig	Technion	SAMN07276280	GCA_002270405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/270/405/GCA_002270405.1_ASM227040v1	-	70885
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.1497	50.7	-	NACG01	151	5466	5013	6/30/17	7/3/17	Contig	US Food and Drug Administration	SAMN05789720	GCA_002212815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/212/815/GCA_002212815.1_ASM221281v1	-	KCJK1770
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32539	65.6	-	FPRY01	73	4250	4069	11/23/16	3/14/17	Scaffold	SC	SAMEA2682707	GCA_900121745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/745/GCA_900121745.1_14722_7_50	-	2926STDY5723457
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.05329	39.6	-	CFVJ01	65	2250	2054	3/15/15	3/11/17	Scaffold	SC	SAMEA770053	GCA_001326475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/475/GCA_001326475.1_5310_1_7	-	17F/2
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.08532	39.5	-	CHYT01	59	2267	2057	4/21/15	3/11/17	Scaffold	SC	SAMEA770062	GCA_001326495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/495/GCA_001326495.1_5310_1_8	-	17F/3
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36693	65.6	-	FPRZ01	90	4283	4092	11/23/16	3/14/17	Scaffold	SC	SAMEA2683088	GCA_900121755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/755/GCA_900121755.1_14722_7_5	-	2926STDY5723842
Escherichia coli	562	PRJNA344524	344524	Proteobacteria	Gammaproteobacteria	5.21549	50.5	-	MKFK01	261	5513	5082	7/12/17	7/14/17	Contig	Zhejiang University	SAMN05828144	GCA_002216895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/895/GCA_002216895.1_ASM221689v1	-	CoR-1
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA343664	343664	Proteobacteria	Gammaproteobacteria	5.15475	51.9	-	MVPP01	160	5374	5080	8/31/17	9/2/17	Contig	Universidad El Bosque	SAMN05792027	GCA_002283535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/535/GCA_002283535.1_ASM228353v1	-	GMR-S-356.16
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.79289	32.7	-	CUAO01	24	2864	2718	3/31/15	3/4/17	Contig	SC	SAMEA1030309	GCA_001225765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/765/GCA_001225765.1_6401_7_1	-	93/3696
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.94355	32.6	-	CTXV01	82	3091	2959	3/31/15	3/4/17	Contig	SC	SAMEA862589	GCA_001226265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/265/GCA_001226265.1_5197_1_1	-	P32
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA343664	343664	Proteobacteria	Gammaproteobacteria	5.15702	51.9	-	MVPQ01	213	5383	5071	8/31/17	9/2/17	Contig	Universidad El Bosque	SAMN05792026	GCA_002283545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/545/GCA_002283545.1_ASM228354v1	-	GMR-S-1454
Escherichia coli	562	PRJNA344524	344524	Proteobacteria	Gammaproteobacteria	5.38155	50.4	-	MKFN01	228	5593	5220	7/12/17	7/14/17	Contig	Zhejiang University	SAMN05828190	GCA_002216905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/905/GCA_002216905.1_ASM221690v1	-	CoR-17
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37044	65.6	-	FPSA01	73	4261	4074	11/23/16	3/14/17	Scaffold	SC	SAMEA2682709	GCA_900121765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/765/GCA_900121765.1_14722_7_51	-	2926STDY5723459
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.13422	39.6	-	CIEZ01	97	2345	2133	4/21/15	3/11/17	Scaffold	SC	SAMEA770066	GCA_001326515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/515/GCA_001326515.1_5192_8_4	-	9A/1
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.01424	39.8	-	CIJN01	101	2185	1985	4/21/15	3/11/17	Scaffold	SC	SAMEA770068	GCA_001326535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/535/GCA_001326535.1_5192_8_1	-	2-Feb
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32185	65.6	-	FPSB01	67	4238	4056	11/23/16	3/14/17	Scaffold	SC	SAMEA2682712	GCA_900121775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/775/GCA_900121775.1_14722_7_52	-	2926STDY5723462
Escherichia coli	562	PRJNA344524	344524	Proteobacteria	Gammaproteobacteria	4.96784	50.7	-	MKFL01	328	5278	4880	7/12/17	7/14/17	Contig	Zhejiang University	SAMN05828183	GCA_002216915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/915/GCA_002216915.1_ASM221691v1	-	CoR-2
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA343664	343664	Proteobacteria	Gammaproteobacteria	5.04294	52.1	-	MVPR01	125	5255	4971	8/31/17	9/2/17	Contig	Universidad El Bosque	SAMN05792025	GCA_002283795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/795/GCA_002283795.1_ASM228379v1	-	GMR-S-1257
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	3.00378	32.6	-	CTXM01	153	3193	3023	3/31/15	3/4/17	Contig	SC	SAMEA862543	GCA_001226525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/525/GCA_001226525.1_5139_7_11	-	MAL11
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.86354	32.7	-	CTYL01	81	3001	2866	3/31/15	3/4/17	Contig	SC	SAMEA862574	GCA_001226625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/625/GCA_001226625.1_5364_1_3	-	DEU3
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA397891	397891	Proteobacteria	Gammaproteobacteria	4.69919	52.1	-	NQNX01	14	4829	4532	8/31/17	9/2/17	Contig	university of minnesota	SAMN07490818	GCA_002284635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/635/GCA_002284635.1_ASM228463v1	-	15-00488
Escherichia coli	562	PRJNA344524	344524	Proteobacteria	Gammaproteobacteria	5.13119	50.5	-	MKFM01	188	5422	4925	7/12/17	7/14/17	Contig	Zhejiang University	SAMN05828188	GCA_002216955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/955/GCA_002216955.1_ASM221695v1	-	CoR-3
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37551	65.6	-	FPSC01	74	4269	4075	11/23/16	3/14/17	Scaffold	SC	SAMEA2682713	GCA_900121785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/785/GCA_900121785.1_14722_7_53	-	2926STDY5723463
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	1.95503	39.9	-	CHJT01	86	2128	1897	4/21/15	3/11/17	Scaffold	SC	SAMEA770070	GCA_001326555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/555/GCA_001326555.1_5192_8_2	-	7A/2
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.1266	39.5	-	CGGJ01	93	2318	2110	3/15/15	3/11/17	Scaffold	SC	SAMEA770082	GCA_001326575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/575/GCA_001326575.1_5242_3_8	-	12F/3
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35892	65.6	-	FPSD01	68	4266	4080	11/23/16	3/14/17	Scaffold	SC	SAMEA2682714	GCA_900121795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/795/GCA_900121795.1_14722_7_54	-	2926STDY5723464
Escherichia coli	562	PRJNA344524	344524	Proteobacteria	Gammaproteobacteria	5.03503	50.6	-	MKFO01	189	5313	4892	7/12/17	7/14/17	Contig	Zhejiang University	SAMN05828195	GCA_002216975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/975/GCA_002216975.1_ASM221697v1	-	CoR-20
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA396575	396575	Proteobacteria	Gammaproteobacteria	4.86985	52.2	-	NPMT01	142	5074	4714	9/13/17	9/15/17	Contig	Fluminense Federal University	SAMN07444097	GCA_002300265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/265/GCA_002300265.1_ASM230026v1	-	ST_PP_BR060
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.85297	32.7	-	CTWH01	90	2984	2828	3/31/15	3/4/17	Contig	SC	SAMEA862643	GCA_001226645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/645/GCA_001226645.1_5083_6_9	-	HU23
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.74391	32.7	-	CUAM01	26	2812	2669	3/31/15	3/4/17	Contig	SC	SAMEA1030250	GCA_001226685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/685/GCA_001226685.1_6401_6_9	-	F869 96
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA396575	396575	Proteobacteria	Gammaproteobacteria	5.45259	51.8	-	NSDQ01	226	-	-	9/13/17	9/13/17	Contig	Fluminense Federal University	SAMN07444515	GCA_002300295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/295/GCA_002300295.1_ASM230029v1	-	ST_PP_BR076
Escherichia coli	562	PRJNA344524	344524	Proteobacteria	Gammaproteobacteria	5.19497	50.5	-	MKFP01	180	5451	5087	7/12/17	7/14/17	Contig	Zhejiang University	SAMN05828200	GCA_002216985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/985/GCA_002216985.1_ASM221698v1	-	CoR-23
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.34915	65.6	-	FPSE01	84	4284	4081	11/23/16	3/14/17	Scaffold	SC	SAMEA2682715	GCA_900121805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/805/GCA_900121805.1_14722_7_55	-	2926STDY5723465
Streptococcus pneumoniae	1313	PRJEB2190	203851	Terrabacteria group	Firmicutes	2.07638	39.7	-	CHDA01	72	2296	2088	4/21/15	3/11/17	Scaffold	SC	SAMEA770083	GCA_001326595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/595/GCA_001326595.1_5242_3_5	-	35C/2
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99106	39.8	-	CGDB01	49	2207	1991	3/15/15	3/11/17	Scaffold	SC	SAMEA970202	GCA_001326615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/615/GCA_001326615.1_5159_8_3	-	BHN644
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3679	65.6	-	FPSH01	80	4279	4075	11/23/16	3/14/17	Scaffold	SC	SAMEA2682716	GCA_900121815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/815/GCA_900121815.1_14722_7_56	-	2926STDY5723466
Escherichia coli	562	PRJNA344524	344524	Proteobacteria	Gammaproteobacteria	5.00421	50.8	-	MKFQ01	191	5254	4888	7/12/17	7/14/17	Contig	Zhejiang University	SAMN05828206	GCA_002216995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/216/995/GCA_002216995.1_ASM221699v1	-	CoR-27
Salmonella enterica	28901	PRJNA388917	388917	Proteobacteria	Gammaproteobacteria	4.70713	52	-	NIDI01	78	4868	4586	9/20/17	9/22/17	Contig	University of Sao Paulo	SAMN07189726	GCA_002317515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/515/GCA_002317515.1_ASM231751v1	-	SE2
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.80176	32.7	-	CUBK01	26	2895	2755	3/31/15	3/4/17	Contig	SC	SAMEA1030207	GCA_001226725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/725/GCA_001226725.1_6401_7_4	-	91/10759
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.88228	32.7	-	CTYC01	84	3061	2931	3/31/15	3/4/17	Contig	SC	SAMEA862586	GCA_001226905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/905/GCA_001226905.1_5197_1_8	-	LIT68
Salmonella enterica	28901	PRJNA388973	388973	Proteobacteria	Gammaproteobacteria	4.92107	51.8	-	NIDJ01	469	5416	5027	9/20/17	9/22/17	Contig	University of Sao Paulo	SAMN07189795	GCA_002317525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/525/GCA_002317525.1_ASM231752v1	-	STy2
Escherichia coli	562	PRJNA344524	344524	Proteobacteria	Gammaproteobacteria	5.26814	50.5	-	MKFR01	369	5588	5097	7/12/17	7/14/17	Contig	Zhejiang University	SAMN05828216	GCA_002217035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/035/GCA_002217035.1_ASM221703v1	-	CoR-16
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36364	65.6	-	FPSF01	80	4282	4079	11/23/16	3/14/17	Scaffold	SC	SAMEA2682717	GCA_900121825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/825/GCA_900121825.1_14722_7_57	-	2926STDY5723467
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99174	39.8	-	CGCT01	48	2205	1996	3/15/15	3/11/17	Scaffold	SC	SAMEA970205	GCA_001326635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/635/GCA_001326635.1_5159_7_7	-	BHN633
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99013	39.8	-	CFOC01	45	2214	2004	3/15/15	3/11/17	Scaffold	SC	SAMEA970207	GCA_001326655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/655/GCA_001326655.1_5159_7_9	-	BHN637
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.38051	65.6	-	FPSG01	77	4288	4114	11/23/16	3/14/17	Scaffold	SC	SAMEA2682718	GCA_900121835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/835/GCA_900121835.1_14722_7_58	-	2926STDY5723468
Escherichia coli	562	PRJNA344524	344524	Proteobacteria	Gammaproteobacteria	4.92336	50.7	-	MKIH01	225	5256	4729	7/12/17	7/14/17	Contig	Zhejiang University	SAMN05831619	GCA_002217055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/055/GCA_002217055.1_ASM221705v1	-	CoR-33
Salmonella enterica subsp. enterica serovar Bareilly str. 06-0784	1212554	PRJNA170997	170997	Proteobacteria	Gammaproteobacteria	4.71254	52	-	ALPN01	102	4832	4464	8/27/12	5/19/17	Scaffold	Centers for Disease Control & Prevention	SAMN02415222	GCA_000293075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/293/075/GCA_000293075.1_ASM29307v1	-	06-0784
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.79674	32.7	-	CUCE01	37	2890	2756	3/31/15	3/4/17	Contig	SC	SAMEA1030186	GCA_001226965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/965/GCA_001226965.1_6437_8_6	-	98.4823.X
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.87133	32.7	-	CTYY01	72	3012	2866	3/31/15	3/4/17	Contig	SC	SAMEA862560	GCA_001227005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/005/GCA_001227005.1_5364_2_7	-	DEU20
Salmonella enterica subsp. enterica serovar Agona str. 01.O.05	1265673	PRJEB1064	198849	Proteobacteria	Gammaproteobacteria	4.79136	52.1	-	CATQ01	161	4849	4603	4/24/13	2/26/17	Scaffold	ERI	SAMEA2272509	GCA_000388195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/195/GCA_000388195.1_01.O.05	23637636	01.O.05
Escherichia coli	562	PRJNA344524	344524	Proteobacteria	Gammaproteobacteria	5.16595	50.3	-	MKFS01	161	5291	4958	7/12/17	7/14/17	Contig	Zhejiang University	SAMN05828245	GCA_002217065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/065/GCA_002217065.1_ASM221706v1	-	CoR-28
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36431	65.6	-	FPSI01	74	4266	4070	11/23/16	3/14/17	Scaffold	SC	SAMEA2682719	GCA_900121845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/845/GCA_900121845.1_14722_7_59	-	2926STDY5723469
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.98128	39.7	-	CGGU01	53	2182	1980	3/15/15	3/11/17	Scaffold	SC	SAMEA970227	GCA_001326675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/675/GCA_001326675.1_5242_6_5	-	BHN572
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.98903	39.8	-	CFOG01	47	2207	1984	3/15/15	3/11/17	Scaffold	SC	SAMEA970240	GCA_001326695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/695/GCA_001326695.1_5242_7_6	-	BHN035
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36755	65.6	-	FPSK01	75	4276	4081	11/23/16	3/14/17	Scaffold	SC	SAMEA2682720	GCA_900121855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/855/GCA_900121855.1_14722_7_60	-	2926STDY5723470
Escherichia coli	562	PRJNA344524	344524	Proteobacteria	Gammaproteobacteria	4.9948	50.6	-	MKIJ01	342	5407	4803	7/12/17	7/14/17	Contig	Zhejiang University	SAMN05831930	GCA_002217075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/075/GCA_002217075.1_ASM221707v1	-	CoR-11
Salmonella enterica subsp. enterica serovar Agona str. 02.O.05	1265665	PRJEB1065	198847	Proteobacteria	Gammaproteobacteria	4.9522	51.9	-	CATP01	174	5033	4717	4/24/13	2/26/17	Scaffold	ERI	SAMEA2271922	GCA_000388215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/215/GCA_000388215.1_02.O.05	23637636	02.O.05
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.93339	32.7	-	CTYF01	133	3094	2927	3/31/15	3/5/17	Contig	SC	SAMEA862604	GCA_001227505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/505/GCA_001227505.1_5295_1_3	-	MU5
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.81952	32.7	-	CTXY01	54	2932	2810	3/31/15	3/4/17	Contig	SC	SAMEA862585	GCA_001227545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/545/GCA_001227545.1_5197_1_5	-	D90
Salmonella enterica subsp. enterica serovar Agona str. 03.O.05	1265636	PRJEB1066	198840	Proteobacteria	Gammaproteobacteria	4.88373	52	-	CATO01	183	4969	4726	4/24/13	2/26/17	Scaffold	ERI	SAMEA2272331	GCA_000388235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/235/GCA_000388235.1_03.O.05	23637636	03.O.05
Escherichia coli	562	PRJNA344524	344524	Proteobacteria	Gammaproteobacteria	4.98203	50.7	-	MKIL01	236	5272	4896	7/12/17	7/14/17	Contig	Zhejiang University	SAMN05832012	GCA_002217115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/115/GCA_002217115.1_ASM221711v1	-	CoR-40
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37989	65.6	-	FPSJ01	70	4284	4100	11/23/16	3/14/17	Scaffold	SC	SAMEA2682721	GCA_900121865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/865/GCA_900121865.1_14722_7_61	-	2926STDY5723471
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99015	39.8	-	CHZR01	44	2205	1984	4/21/15	3/11/17	Scaffold	SC	SAMEA970271	GCA_001326715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/715/GCA_001326715.1_5159_6_9	-	BHN622
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99046	39.7	-	CGDI01	50	2199	1987	3/15/15	3/11/17	Scaffold	SC	SAMEA970273	GCA_001326735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/735/GCA_001326735.1_5159_5_11	-	BHN612
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36136	65.6	-	FPSL01	91	4284	4071	11/23/16	3/14/17	Scaffold	SC	SAMEA2682722	GCA_900121875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/875/GCA_900121875.1_14722_7_62	-	2926STDY5723472
Escherichia coli	562	PRJNA344524	344524	Proteobacteria	Gammaproteobacteria	4.96663	50.5	-	MKII01	189	5216	4826	7/12/17	7/14/17	Contig	Zhejiang University	SAMN05831925	GCA_002217135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/135/GCA_002217135.1_ASM221713v1	-	CoR-37
Salmonella enterica subsp. enterica serovar Agona str. 04.O.05	1265657	PRJEB1067	198845	Proteobacteria	Gammaproteobacteria	4.78716	52.1	-	CATN01	178	4857	4604	4/24/13	2/26/17	Scaffold	ERI	SAMEA2272255	GCA_000388255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/255/GCA_000388255.1_04.O.05	23637636	04.O.05
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.89943	32.7	-	CTWJ01	100	3064	2901	3/31/15	3/4/17	Contig	SC	SAMEA862631	GCA_001227565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/565/GCA_001227565.1_5083_6_4	-	HU16
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.90511	32.7	-	CTXG01	217	3076	2887	3/31/15	3/5/17	Contig	SC	SAMEA862529	GCA_001227825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/825/GCA_001227825.1_5139_6_10	-	FRICAR
Salmonella enterica subsp. enterica serovar Agona str. 05.O.06	1265678	PRJEB1068	198850	Proteobacteria	Gammaproteobacteria	4.78818	52.1	-	CATM01	198	4873	4601	4/24/13	2/26/17	Scaffold	ERI	SAMEA2272786	GCA_000388275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/275/GCA_000388275.1_05.O.06	23637636	05.O.06
Escherichia coli	562	PRJNA344524	344524	Proteobacteria	Gammaproteobacteria	5.11029	50.7	-	MKIK01	563	5592	5026	7/12/17	7/14/17	Contig	Zhejiang University	SAMN05831961	GCA_002217145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/217/145/GCA_002217145.1_ASM221714v1	-	CoR-38
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.33536	65.6	-	FPSN01	81	4261	4076	11/23/16	3/14/17	Scaffold	SC	SAMEA2682727	GCA_900121885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/885/GCA_900121885.1_14722_7_64	-	2926STDY5723477
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99077	39.8	-	CHZQ01	43	2209	1987	4/21/15	3/11/17	Scaffold	SC	SAMEA970277	GCA_001326755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/755/GCA_001326755.1_5159_7_11	-	BHN640
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99149	39.7	-	CIFQ01	52	2208	1994	4/21/15	3/11/17	Scaffold	SC	SAMEA970284	GCA_001326775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/775/GCA_001326775.1_5242_7_2	-	BHN580
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3567	65.6	-	FPSM01	80	4270	4084	11/23/16	3/14/17	Scaffold	SC	SAMEA2682729	GCA_900121895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/895/GCA_900121895.1_14722_7_65	-	2926STDY5723479
Escherichia coli	562	PRJNA386428	386428	Proteobacteria	Gammaproteobacteria	5.53287	50.6	-	NGBP02	283	6040	5476	7/14/17	8/12/17	Contig	National Institute for Communicable Diseases	SAMN06947111	GCA_002218525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/218/525/GCA_002218525.2_ASM221852v2	-	YA00028237
Salmonella enterica subsp. enterica serovar Agona str. 06.O.05	1265642	PRJEB1069	198842	Proteobacteria	Gammaproteobacteria	4.8883	52	-	CATL01	176	4970	4721	4/24/13	2/26/17	Scaffold	ERI	SAMEA2272471	GCA_000388295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/295/GCA_000388295.1_06.O.05	23637636	06.O.05
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.80972	32.7	-	CTZL01	31	2907	2749	3/31/15	3/4/17	Contig	SC	SAMEA1030144	GCA_001227905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/905/GCA_001227905.1_6401_6_1	-	ARI31
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.79341	32.7	-	CTZY01	28	2878	2716	3/31/15	3/4/17	Contig	SC	SAMEA1030160	GCA_001227945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/945/GCA_001227945.1_6401_6_2	-	ARI7
Salmonella enterica subsp. enterica serovar Agona str. 07.O.05	1265611	PRJEB1070	198838	Proteobacteria	Gammaproteobacteria	4.88798	52	-	CATK01	173	4965	4723	4/24/13	2/26/17	Scaffold	ERI	SAMEA2272241	GCA_000388315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/315/GCA_000388315.1_07.O.05	23637636	07.O.05
Escherichia coli	562	PRJNA358785	358785	Proteobacteria	Gammaproteobacteria	4.93279	50.6	-	NIHY01	114	5231	4805	7/20/17	7/22/17	Contig	National institutes of Food and Drug Control	SAMN06973359	GCA_002222925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/222/925/GCA_002222925.1_ASM222292v1	28686503	FC11895
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.38041	65.6	-	FPSO01	80	4278	4103	11/23/16	3/14/17	Scaffold	SC	SAMEA2682731	GCA_900121905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/905/GCA_900121905.1_14722_7_66	-	2926STDY5723481
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.98665	39.7	-	CHZV01	46	2207	1993	4/21/15	3/11/17	Scaffold	SC	SAMEA970285	GCA_001326795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/795/GCA_001326795.1_5242_7_1	-	BHN579
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.98859	39.8	-	CIFY01	47	2198	1992	4/21/15	3/11/17	Scaffold	SC	SAMEA970287	GCA_001326815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/815/GCA_001326815.1_5242_6_11	-	BHN577
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.34927	65.6	-	FPSP01	86	4272	4082	11/23/16	3/14/17	Scaffold	SC	SAMEA2682732	GCA_900121915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/915/GCA_900121915.1_14722_7_67	-	2926STDY5723482
Escherichia coli	562	PRJNA358785	358785	Proteobacteria	Gammaproteobacteria	4.92729	50.6	-	NIIA01	107	5233	4811	7/20/17	7/22/17	Contig	National institutes of Food and Drug Control	SAMN06973357	GCA_002222955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/222/955/GCA_002222955.1_ASM222295v1	28686503	FC11892
Salmonella enterica subsp. enterica serovar Agona str. 08.A.05	1265637	PRJEB1071	198841	Proteobacteria	Gammaproteobacteria	4.80852	52	-	CATJ01	158	4878	4631	4/24/13	2/26/17	Scaffold	ERI	SAMEA2272326	GCA_000388335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/335/GCA_000388335.1_08.A.05	23637636	08.A.05
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	3.03315	32.6	-	CTXL01	204	3241	3058	3/31/15	3/4/17	Contig	SC	SAMEA862552	GCA_001228045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/045/GCA_001228045.1_5139_7_10	-	MAL1
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.80089	32.7	-	CUBX01	32	2923	2741	3/31/15	3/4/17	Contig	SC	SAMEA1030228	GCA_001228065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/065/GCA_001228065.1_6437_8_20	-	ARI12
Salmonella enterica subsp. enterica serovar Agona str. 09.F.08	1265658	PRJEB1072	189735	Proteobacteria	Gammaproteobacteria	4.71847	52.1	-	CATF01	144	4764	4513	4/29/13	2/26/17	Scaffold	ERI	SAMEA2272612	GCA_000388355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/355/GCA_000388355.1_09.F.08	23637636	09.F.08
Escherichia coli	562	PRJNA358785	358785	Proteobacteria	Gammaproteobacteria	5.06405	50.8	-	NIIC01	138	5305	4899	7/20/17	7/22/17	Contig	National institutes of Food and Drug Control	SAMN06973355	GCA_002223015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/015/GCA_002223015.1_ASM222301v1	28686503	FC10276
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3678	65.6	-	FPSQ01	75	4277	4081	11/23/16	3/14/17	Scaffold	SC	SAMEA2682733	GCA_900121925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/925/GCA_900121925.1_14722_7_68	-	2926STDY5723483
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.98121	39.8	-	CFOD01	56	2180	1989	3/15/15	3/11/17	Scaffold	SC	SAMEA970291	GCA_001326835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/835/GCA_001326835.1_5242_8_3	-	BHN592
Streptococcus pneumoniae	1313	PRJEB2191	203852	Terrabacteria group	Firmicutes	1.99091	39.7	-	CIGE01	45	2207	1991	4/21/15	3/11/17	Scaffold	SC	SAMEA970298	GCA_001326875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/875/GCA_001326875.1_5242_8_12	-	BHN601
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3833	65.6	-	FPSR01	79	4287	4093	11/23/16	3/14/17	Scaffold	SC	SAMEA2683107	GCA_900121935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/935/GCA_900121935.1_14722_7_7	-	2926STDY5723861
Escherichia coli	562	PRJNA358785	358785	Proteobacteria	Gammaproteobacteria	5.13951	50.6	-	NIIE01	128	5405	5057	7/20/17	7/22/17	Contig	National institutes of Food and Drug Control	SAMN06973353	GCA_002223405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/405/GCA_002223405.1_ASM222340v1	28686503	FC10274
Salmonella enterica subsp. enterica serovar Agona str. 10.A.05	1265679	PRJEB1073	198851	Proteobacteria	Gammaproteobacteria	4.71134	52.1	-	CATR01	158	4748	4516	4/24/13	2/26/17	Scaffold	ERI	SAMEA2272223	GCA_000388375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/375/GCA_000388375.1_10.A.05	23637636	10.A.05
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.87418	32.7	-	CTWG01	76	3032	2887	3/31/15	3/4/17	Contig	SC	SAMEA862646	GCA_001228265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/265/GCA_001228265.1_5083_7_2	-	IU2
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.8971	32.7	-	CTYV01	77	3042	2889	3/31/15	3/4/17	Contig	SC	SAMEA862557	GCA_001228365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/365/GCA_001228365.1_5364_2_4	-	DEU16
Salmonella enterica subsp. enterica serovar Agona str. 11.A.05	1265643	PRJEB1074	189731	Proteobacteria	Gammaproteobacteria	4.73441	52.1	-	CATE01	144	4779	4527	4/29/13	2/26/17	Scaffold	ERI	SAMEA2272500	GCA_000388395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/395/GCA_000388395.1_11.A.05	23637636	11.A.05
Escherichia coli	562	PRJNA358785	358785	Proteobacteria	Gammaproteobacteria	5.1702	50.7	-	NIIQ01	165	5429	5035	7/20/17	7/22/17	Contig	National institutes of Food and Drug Control	SAMN06973341	GCA_002223485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/485/GCA_002223485.1_ASM222348v1	28686503	FC10244
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37284	65.6	-	FPST01	67	4276	4075	11/23/16	3/14/17	Scaffold	SC	SAMEA2682736	GCA_900121945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/945/GCA_900121945.1_14722_7_70	-	2926STDY5723486
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.06842	39.6	-	CHYP01	68	2249	2008	4/21/15	3/11/17	Scaffold	SC	SAMEA1019955	GCA_001328895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/895/GCA_001328895.1_6187_4_16	-	S-167
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.19081	39.6	-	CHDG01	87	2412	2147	4/21/15	3/11/17	Scaffold	SC	SAMEA1020008	GCA_001328915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/915/GCA_001328915.1_6732_1_7	-	SN11917
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36542	65.6	-	FPSS01	80	4265	4070	11/23/16	3/14/17	Scaffold	SC	SAMEA2682737	GCA_900121955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/955/GCA_900121955.1_14722_7_71	-	2926STDY5723487
Escherichia coli	562	PRJNA358785	358785	Proteobacteria	Gammaproteobacteria	4.75555	50.6	-	NIIG01	99	4976	4561	7/20/17	7/22/17	Contig	National institutes of Food and Drug Control	SAMN06973351	GCA_002223575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/575/GCA_002223575.1_ASM222357v1	28686503	FC10269
Salmonella enterica subsp. enterica serovar Agona str. 12.A.06	1265612	PRJEB1075	189723	Proteobacteria	Gammaproteobacteria	4.71504	52.1	-	CATD01	145	4766	4516	4/29/13	2/26/17	Scaffold	ERI	SAMEA2272488	GCA_000388415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/415/GCA_000388415.1_12.A.06	23637636	12.A.06
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.85858	32.7	-	CTWP01	113	2983	2850	3/31/15	3/4/17	Contig	SC	SAMEA862636	GCA_001228645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/645/GCA_001228645.1_5083_6_1	-	HU13
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.86552	32.7	-	CTYI01	69	3009	2875	3/31/15	3/4/17	Contig	SC	SAMEA862554	GCA_001228785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/785/GCA_001228785.1_5364_1_11	-	DEU11
Salmonella enterica subsp. enterica serovar Agona str. 13.E.05	1265638	PRJEB1076	189730	Proteobacteria	Gammaproteobacteria	4.75341	52	-	CATC01	153	4816	4584	4/29/13	2/26/17	Scaffold	ERI	SAMEA2272111	GCA_000388435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/435/GCA_000388435.1_13.E.05	23637636	13.E.05
Escherichia coli	562	PRJNA358785	358785	Proteobacteria	Gammaproteobacteria	4.93989	50.7	-	NIIO01	88	5194	4821	7/20/17	7/22/17	Contig	National institutes of Food and Drug Control	SAMN06973343	GCA_002223625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/625/GCA_002223625.1_ASM222362v1	28686503	FC10247
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36133	65.6	-	FPSU01	78	4283	4092	11/23/16	3/14/17	Scaffold	SC	SAMEA2682738	GCA_900121965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/965/GCA_900121965.1_14722_7_72	-	2926STDY5723488
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.04227	39.7	-	CIEX01	56	2230	2018	4/21/15	3/11/17	Scaffold	SC	SAMEA1020020	GCA_001328935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/935/GCA_001328935.1_6289_8_13	-	SN36109
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.14142	39.6	-	CFNV01	78	2358	2136	3/15/15	3/11/17	Scaffold	SC	SAMEA1020036	GCA_001328955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/955/GCA_001328955.1_6569_4_2	-	DCC1738
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36957	65.6	-	FPSW01	68	4282	4089	11/23/16	3/14/17	Scaffold	SC	SAMEA2682740	GCA_900121975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/975/GCA_900121975.1_14722_7_73	-	2926STDY5723490
Escherichia coli	562	PRJNA358785	358785	Proteobacteria	Gammaproteobacteria	5.5119	50.6	-	NIIT01	167	5763	5338	7/20/17	7/22/17	Contig	National institutes of Food and Drug Control	SAMN06973338	GCA_002223635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/635/GCA_002223635.1_ASM222363v1	28686503	FC10223
Salmonella enterica subsp. enterica serovar Agona str. 14.E.05	1265659	PRJEB1077	189736	Proteobacteria	Gammaproteobacteria	4.75355	52	-	CATB01	146	4823	4584	4/29/13	2/26/17	Scaffold	ERI	SAMEA2272608	GCA_000388455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/455/GCA_000388455.1_14.E.05	23637636	14.E.05
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.85954	32.7	-	CTZI01	62	3018	2848	3/31/15	3/4/17	Contig	SC	SAMEA862618	GCA_001228965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/965/GCA_001228965.1_5364_6_4	-	HU4
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.8819	32.7	-	CTXW01	126	3036	2870	3/31/15	3/4/17	Contig	SC	SAMEA862588	GCA_001229045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/045/GCA_001229045.1_5197_1_2	-	RA3
Salmonella enterica subsp. enterica serovar Agona str. 15.H.03	1265680	PRJEB1078	189738	Proteobacteria	Gammaproteobacteria	4.75245	52	-	CATA01	158	4797	4567	4/29/13	2/26/17	Scaffold	ERI	SAMEA2272219	GCA_000388475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/475/GCA_000388475.1_15.H.03	23637636	15.H.03
Escherichia coli	562	PRJNA358785	358785	Proteobacteria	Gammaproteobacteria	4.72341	50.6	-	NIID01	91	4937	4532	7/20/17	7/22/17	Contig	National institutes of Food and Drug Control	SAMN06973354	GCA_002223655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/655/GCA_002223655.1_ASM222365v1	28686503	FC10275
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3791	65.6	-	FPSV01	67	4292	4097	11/23/16	3/14/17	Scaffold	SC	SAMEA2682741	GCA_900121985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/985/GCA_900121985.1_14722_7_74	-	2926STDY5723491
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.05147	39.7	-	CFNT01	61	2271	2038	3/15/15	3/11/17	Scaffold	SC	SAMEA1020110	GCA_001329015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/015/GCA_001329015.1_5901_6_5	-	7039-04
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.05272	39.7	-	CGAP01	58	2269	2015	3/15/15	3/11/17	Scaffold	SC	SAMEA1020126	GCA_001329035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/035/GCA_001329035.1_6246_3_23	-	LMG1583
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37264	65.6	-	FPSX01	68	4266	4089	11/23/16	3/14/17	Scaffold	SC	SAMEA2682742	GCA_900121995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/121/995/GCA_900121995.1_14722_7_75	-	2926STDY5723492
Escherichia coli	562	PRJNA358785	358785	Proteobacteria	Gammaproteobacteria	5.38956	50.5	-	NIIJ01	123	5659	5215	7/20/17	7/22/17	Contig	National institutes of Food and Drug Control	SAMN06973348	GCA_002223665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/665/GCA_002223665.1_ASM222366v1	28686503	FC10256
Salmonella enterica subsp. enterica serovar Agona str. 17.H.06	1265613	PRJEB1080	189724	Proteobacteria	Gammaproteobacteria	4.78785	52	-	CASY01	151	4850	4619	4/29/13	2/26/17	Scaffold	ERI	SAMEA2272289	GCA_000388495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/495/GCA_000388495.1_17.H.06	23637636	17.H.06
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.86886	32.7	-	CTYO01	71	3028	2875	3/31/15	3/5/17	Contig	SC	SAMEA862580	GCA_001229425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/425/GCA_001229425.1_5364_1_5	-	DEU5
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.92673	32.7	-	CTWS01	123	3101	2961	3/31/15	3/5/17	Contig	SC	SAMEA862527	GCA_001229625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/625/GCA_001229625.1_5139_6_12	-	H24
Salmonella enterica subsp. enterica serovar Agona str. 18.H.07	1265644	PRJEB1081	189732	Proteobacteria	Gammaproteobacteria	4.77891	52	-	CASX01	149	4844	4603	4/29/13	2/26/17	Scaffold	ERI	SAMEA2272390	GCA_000388515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/515/GCA_000388515.1_18.H.07	23637636	18.H.07
Escherichia coli	562	PRJNA358785	358785	Proteobacteria	Gammaproteobacteria	5.43867	50.5	-	NIIK01	165	5763	5286	7/20/17	7/22/17	Contig	National institutes of Food and Drug Control	SAMN06973347	GCA_002223705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/705/GCA_002223705.1_ASM222370v1	28686503	FC10255
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3829	65.6	-	FPSY01	73	4289	4106	11/23/16	3/14/17	Scaffold	SC	SAMEA2682743	GCA_900122005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/005/GCA_900122005.1_14722_7_76	-	2926STDY5723493
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.05983	39.6	-	CGAU01	73	2263	2031	3/15/15	3/11/17	Scaffold	SC	SAMEA1020145	GCA_001329055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/055/GCA_001329055.1_6187_4_17	-	S-184
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.0332	39.7	-	CHYK01	67	2222	2003	4/21/15	3/10/17	Scaffold	SC	SAMEA1020146	GCA_001329075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/075/GCA_001329075.1_6187_6_13	-	LMG1562
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36866	65.6	-	FPSZ01	75	4281	4098	11/23/16	3/14/17	Scaffold	SC	SAMEA2682745	GCA_900122015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/015/GCA_900122015.1_14722_7_77	-	2926STDY5723495
Escherichia coli	562	PRJNA358785	358785	Proteobacteria	Gammaproteobacteria	5.49337	50.6	-	NIIS01	129	5744	5359	7/20/17	7/22/17	Contig	National institutes of Food and Drug Control	SAMN06973339	GCA_002223755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/755/GCA_002223755.1_ASM222375v1	28686503	FC10225
Salmonella enterica subsp. enterica serovar Agona str. 19.F.03	1265668	PRJEB1082	189737	Proteobacteria	Gammaproteobacteria	4.71962	52.1	-	CASW01	156	4743	4524	4/29/13	2/26/17	Scaffold	ERI	SAMEA2272782	GCA_000388535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/535/GCA_000388535.1_19.F.03	23637636	19.F.03
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.78274	32.7	-	CUAF01	34	2871	2733	3/31/15	3/4/17	Contig	SC	SAMEA1030181	GCA_001229725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/725/GCA_001229725.1_6401_6_5	-	W449 36
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.8743	32.7	-	CTWM01	73	3021	2870	3/31/15	3/4/17	Contig	SC	SAMEA862653	GCA_001229745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/745/GCA_001229745.1_5083_7_10	-	IU11
Salmonella enterica subsp. enterica serovar Agona str. 20.H.06	1265614	PRJEB1083	189725	Proteobacteria	Gammaproteobacteria	4.84895	52	-	CASV01	212	4922	4639	4/29/13	2/26/17	Scaffold	ERI	SAMEA2272286	GCA_000388555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/555/GCA_000388555.1_20.H.06	23637636	20.H.06
Escherichia coli	562	PRJNA344524	344524	Proteobacteria	Gammaproteobacteria	5.18375	50.5	-	NIRY01	122	5419	5027	7/21/17	7/24/17	Contig	Zhejiang University	SAMN07211287	GCA_002223865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/865/GCA_002223865.1_ASM222386v1	-	CoR-29
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3585	65.6	-	FPTA01	89	4287	4073	11/23/16	3/14/17	Scaffold	SC	SAMEA2682746	GCA_900122025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/025/GCA_900122025.1_14722_7_78	-	2926STDY5723496
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.27022	39.5	-	CGBI01	60	2535	2288	3/15/15	3/10/17	Scaffold	SC	SAMEA1020167	GCA_001329095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/095/GCA_001329095.1_6570_2_6	-	SPN11926
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.03441	39.9	-	CVMS01	128	2246	1990	4/16/15	3/10/17	Scaffold	SC	SAMEA1020187	GCA_001329115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/115/GCA_001329115.1_6289_8_8	-	SN27474
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36735	65.6	-	FPTB01	91	4275	4074	11/23/16	3/14/17	Scaffold	SC	SAMEA2682748	GCA_900122035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/035/GCA_900122035.1_14722_7_79	-	2926STDY5723498
Escherichia coli	562	PRJNA344524	344524	Proteobacteria	Gammaproteobacteria	4.95013	50.6	-	NISA01	91	5236	4853	7/21/17	7/24/17	Contig	Zhejiang University	SAMN07211290	GCA_002223985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/985/GCA_002223985.1_ASM222398v1	-	CoR-35
Salmonella enterica subsp. enterica serovar Agona str. 21.H.10	1265650	PRJEB1084	189734	Proteobacteria	Gammaproteobacteria	4.87327	52.1	-	CASU01	165	4911	4701	4/29/13	2/26/17	Scaffold	ERI	SAMEA2272677	GCA_000388575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/575/GCA_000388575.1_21.H.10	23637636	21.H.10
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.83364	32.7	-	CUBL01	32	2945	2786	3/31/15	3/5/17	Contig	SC	SAMEA1030218	GCA_001229805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/805/GCA_001229805.1_6437_8_10	-	C720 MRSA
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.77831	32.7	-	CUAC01	32	2867	2730	3/31/15	3/5/17	Contig	SC	SAMEA1030177	GCA_001230185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/185/GCA_001230185.1_6401_6_3	-	T277 06
Salmonella enterica subsp. enterica serovar Agona str. 22.H.04	1265618	PRJEB1085	189726	Proteobacteria	Gammaproteobacteria	4.77865	52	-	CAST01	173	4843	4597	4/29/13	2/26/17	Scaffold	ERI	SAMEA2272603	GCA_000388595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/595/GCA_000388595.1_22.H.04	23637636	22.H.04
Escherichia coli	562	PRJNA390247	390247	Proteobacteria	Gammaproteobacteria	5.40038	50.3	-	NJDB01	265	5826	5349	7/24/17	7/28/17	Contig	INRA	SAMN07224767	GCA_002224665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/665/GCA_002224665.1_ASM222466v1	-	MC2
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36739	65.6	-	FPTC01	77	4278	4084	11/23/16	3/14/17	Scaffold	SC	SAMEA2683109	GCA_900122045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/045/GCA_900122045.1_14722_7_8	-	2926STDY5723863
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.27026	39.7	-	CIKR01	92	2447	2243	4/21/15	3/10/17	Scaffold	SC	SAMEA1020242	GCA_001329155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/155/GCA_001329155.1_6187_4_10	-	S-019
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.11803	39.5	-	CVMN01	65	2330	2087	4/16/15	3/10/17	Scaffold	SC	SAMEA1020256	GCA_001329175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/175/GCA_001329175.1_6289_8_19	-	SN23212
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36944	65.6	-	FPTD01	77	4275	4085	11/23/16	3/14/17	Scaffold	SC	SAMEA2682749	GCA_900122055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/055/GCA_900122055.1_14722_7_80	-	2926STDY5723499
Escherichia coli	562	PRJNA265018	265018	Proteobacteria	Gammaproteobacteria	5.28377	50.5	-	JSXL01	214	5536	5142	7/24/17	7/28/17	Contig	University of Hyderabad	SAMN03145049	GCA_002224705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/705/GCA_002224705.1_ASM222470v1	-	NA057
Salmonella enterica subsp. enterica serovar Agona str. 23.F.01	1265639	PRJEB1086	189608	Proteobacteria	Gammaproteobacteria	4.81745	52	-	CASS01	171	4860	4627	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272180	GCA_000388615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/615/GCA_000388615.1_23.F.01	23637636	23.F.01
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.88473	32.7	-	CUAK01	33	3018	2827	3/31/15	3/5/17	Contig	SC	SAMEA1030259	GCA_001230225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/225/GCA_001230225.1_6401_6_8	-	H914 91
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.81054	32.6	-	CTWB01	92	2927	2788	3/31/15	3/4/17	Contig	SC	SAMEA862644	GCA_001230265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/265/GCA_001230265.1_5083_6_12	-	HU26
Salmonella enterica subsp. enterica serovar Agona str. 24.H.04	1265660	PRJEB1087	189618	Proteobacteria	Gammaproteobacteria	4.82263	52	-	CASR01	149	4888	4649	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272554	GCA_000388635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/635/GCA_000388635.1_24.H.04	23637636	24.H.04
Escherichia coli	562	PRJNA265020	265020	Proteobacteria	Gammaproteobacteria	5.23819	50.5	-	JSXM01	223	5435	5066	7/24/17	7/28/17	Contig	University of Hyderabad	SAMN03145051	GCA_002224715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/715/GCA_002224715.1_ASM222471v1	-	NA081
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36236	65.6	-	FPTE01	74	4271	4072	11/23/16	3/14/17	Scaffold	SC	SAMEA2682750	GCA_900122065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/065/GCA_900122065.1_14722_7_81	-	2926STDY5723500
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.1644	39.5	-	CVMO01	76	2367	2131	4/16/15	3/11/17	Scaffold	SC	SAMEA1020294	GCA_001329215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/215/GCA_001329215.1_6551_7_11	-	SPN2906
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.12258	39.5	-	CGAX01	102	2314	2074	3/15/15	3/11/17	Scaffold	SC	SAMEA1020310	GCA_001329235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/235/GCA_001329235.1_6187_4_14	-	S-112
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3676	65.6	-	FPTH01	71	4267	4085	11/23/16	3/14/17	Scaffold	SC	SAMEA2682751	GCA_900122075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/075/GCA_900122075.1_14722_7_82	-	2926STDY5723501
Escherichia coli	562	PRJNA265022	265022	Proteobacteria	Gammaproteobacteria	5.14859	50.8	-	JSXO01	168	5455	5093	7/24/17	7/28/17	Contig	University of Hyderabad	SAMN03145053	GCA_002224745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/745/GCA_002224745.1_ASM222474v1	-	NA112
Salmonella enterica subsp. enterica serovar Agona str. 26.F.98	1265681	PRJEB1088	198852	Proteobacteria	Gammaproteobacteria	4.77156	52	-	CATX01	154	4805	4524	4/24/13	2/26/17	Scaffold	ERI	SAMEA2272268	GCA_000388655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/655/GCA_000388655.1_26.F.98	23637636	26.F.98
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.90682	32.7	-	CTXC01	185	3079	2920	3/31/15	3/5/17	Contig	SC	SAMEA862616	GCA_001230325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/325/GCA_001230325.1_5119_1_9	-	RA7
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.8777	32.7	-	CUBZ01	34	2998	2841	3/31/15	3/5/17	Contig	SC	SAMEA1030234	GCA_001230385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/385/GCA_001230385.1_6437_8_22	-	ARI29
Salmonella enterica subsp. enterica serovar Agona str. 27.O.98	1265645	PRJEB1089	189611	Proteobacteria	Gammaproteobacteria	4.73857	52	-	CASQ01	183	4803	4552	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272674	GCA_000388675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/675/GCA_000388675.1_27.O.98	23637636	27.O.98
Escherichia coli	562	PRJNA265016	265016	Proteobacteria	Gammaproteobacteria	5.19206	50.6	-	JSXK01	176	5416	5052	7/24/17	7/28/17	Contig	University of Hyderabad	SAMN03145047	GCA_002224755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/755/GCA_002224755.1_ASM222475v1	-	NA023
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37095	65.6	-	FPTF01	67	4261	4088	11/23/16	3/14/17	Scaffold	SC	SAMEA2682754	GCA_900122085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/085/GCA_900122085.1_14722_7_85	-	2926STDY5723504
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.15895	39.7	-	CGAT01	126	2328	2094	3/15/15	3/5/17	Scaffold	SC	SAMEA1020311	GCA_001329255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/255/GCA_001329255.1_6187_4_3	-	DG_25
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.17983	39.5	-	CIEP01	87	2411	2159	4/21/15	3/5/17	Scaffold	SC	SAMEA1020329	GCA_001329275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/275/GCA_001329275.1_6246_3_20	-	LMG1435
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32277	65.6	-	FPTG01	63	4245	4064	11/23/16	3/14/17	Scaffold	SC	SAMEA2682755	GCA_900122095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/095/GCA_900122095.1_14722_7_86	-	2926STDY5723505
Escherichia coli	562	PRJNA270164	270164	Proteobacteria	Gammaproteobacteria	5.08424	50.7	-	JWHS01	286	5375	4915	7/24/17	7/28/17	Contig	University of Hyderabad	SAMN03263615	GCA_002224785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/785/GCA_002224785.1_ASM222478v1	-	NA447
Salmonella enterica subsp. enterica serovar Agona str. 28.O.08	1265615	PRJEB1090	189589	Proteobacteria	Gammaproteobacteria	4.73751	52	-	CASP01	180	4808	4552	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272387	GCA_000388695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/695/GCA_000388695.1_28.O.08	23637636	28.O.08
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.87056	32.7	-	CTYN01	88	3023	2869	3/31/15	3/5/17	Contig	SC	SAMEA862553	GCA_001230505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/505/GCA_001230505.1_5364_1_12	-	DEU12
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.82286	32.7	-	CUAG01	36	2928	2775	3/31/15	3/5/17	Contig	SC	SAMEA1030330	GCA_001230765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/765/GCA_001230765.1_6401_6_6	-	M810 08
Salmonella enterica subsp. enterica serovar Agona str. 29.O.08	1265640	PRJEB1091	189609	Proteobacteria	Gammaproteobacteria	4.73514	52	-	CASO01	224	4832	4500	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272057	GCA_000388715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/715/GCA_000388715.1_29.O.08	23637636	29.O.08
Escherichia coli	562	PRJNA265021	265021	Proteobacteria	Gammaproteobacteria	5.28601	50.7	-	JSXN01	175	5603	5206	7/24/17	7/28/17	Contig	University of Hyderabad	SAMN03145052	GCA_002224795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/795/GCA_002224795.1_ASM222479v1	-	NA101
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36572	65.6	-	FPTI01	71	4271	4090	11/23/16	3/14/17	Scaffold	SC	SAMEA2682756	GCA_900122105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/105/GCA_900122105.1_14722_7_87	-	2926STDY5723506
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.07018	39.6	-	CVML01	38	2268	2026	4/16/15	3/5/17	Scaffold	SC	SAMEA1020395	GCA_001329295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/295/GCA_001329295.1_6570_3_3	-	SPN22809
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.01534	39.8	-	CFNW01	70	2232	2001	3/15/15	3/5/17	Scaffold	SC	SAMEA1020482	GCA_001329335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/335/GCA_001329335.1_5901_5_8	-	6378-99
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36784	65.6	-	FPTJ01	72	4275	4088	11/23/16	3/14/17	Scaffold	SC	SAMEA2682757	GCA_900122115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/115/GCA_900122115.1_14722_7_88	-	2926STDY5723507
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.79975	50.7	-	NLFQ01	179	5015	4667	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05439340	GCA_002225465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/465/GCA_002225465.1_ASM222546v1	-	MOD1-EC5752
Salmonella enterica subsp. enterica serovar Agona str. 30.H.04	1265661	PRJEB1092	198846	Proteobacteria	Gammaproteobacteria	4.87224	52	-	CATW01	160	4963	4698	4/24/13	2/26/17	Scaffold	ERI	SAMEA2272549	GCA_000388735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/735/GCA_000388735.1_30.H.04	23637636	30.H.04
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.8645	32.7	-	CTXD01	152	3010	2842	3/31/15	3/5/17	Contig	SC	SAMEA862657	GCA_001230925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/925/GCA_001230925.1_5139_6_2	-	IU15
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.87048	32.7	-	CTWQ01	88	3032	2866	3/31/15	3/5/17	Contig	SC	SAMEA862617	GCA_001230965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/965/GCA_001230965.1_5083_7_8	-	IU9
Salmonella enterica subsp. enterica serovar Agona str. 31.H.09	1265682	PRJEB1093	189631	Proteobacteria	Gammaproteobacteria	4.71098	52.1	-	CASN01	141	4743	4514	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272173	GCA_000388755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/755/GCA_000388755.1_31.H.09	23637636	31.H.09
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.10744	50.6	-	NLFP01	194	5373	4973	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05439339	GCA_002225505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/505/GCA_002225505.1_ASM222550v1	-	MOD1-EC5753
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32437	65.6	-	FPTL01	70	4252	4065	11/23/16	3/14/17	Scaffold	SC	SAMEA2682759	GCA_900122125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/125/GCA_900122125.1_14722_7_89	-	2926STDY5723509
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.13822	39.5	-	CFIL01	77	2365	2137	3/15/15	3/5/17	Scaffold	SC	SAMEA1020490	GCA_001329355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/355/GCA_001329355.1_6187_6_16	-	LMG1978
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.04583	39.6	-	CHDC01	62	2226	1994	4/21/15	3/5/17	Scaffold	SC	SAMEA1020516	GCA_001329395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/395/GCA_001329395.1_6259_1_8	-	SN31817
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.34961	65.6	-	FPTK01	88	4274	4067	11/23/16	3/14/17	Scaffold	SC	SAMEA2683115	GCA_900122135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/135/GCA_900122135.1_14722_7_9	-	2926STDY5723869
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.96339	50.7	-	NLFR01	190	5222	4825	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05464500	GCA_002225535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/535/GCA_002225535.1_ASM222553v1	-	MOD1-EC5750
Salmonella enterica subsp. enterica serovar Agona str. 32.A.00	1265646	PRJEB1094	189612	Proteobacteria	Gammaproteobacteria	4.8278	52	-	CASM01	248	4934	4658	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272669	GCA_000388775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/775/GCA_000388775.1_32.A.00	23637636	32.A.00
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.83578	32.7	-	CUBY01	32	2968	2783	3/31/15	3/5/17	Contig	SC	SAMEA1030222	GCA_001231065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/065/GCA_001231065.1_6437_8_21	-	ARI26
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.94767	32.6	-	CTXU01	137	3108	2944	3/31/15	3/5/17	Contig	SC	SAMEA862551	GCA_001231325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/325/GCA_001231325.1_5139_7_9	-	M996
Salmonella enterica subsp. enterica serovar Agona str. 33.A.05	1265616	PRJEB1095	189590	Proteobacteria	Gammaproteobacteria	4.72198	52	-	CASL01	154	4735	4516	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272279	GCA_000388795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/795/GCA_000388795.1_33.A.05	23637636	33.A.05
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.16708	50.6	-	NLFS01	285	5510	5052	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05439341	GCA_002225555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/555/GCA_002225555.1_ASM222555v1	-	MOD1-EC5749
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.38111	65.6	-	FPTM01	70	4277	4099	11/23/16	3/14/17	Scaffold	SC	SAMEA2682760	GCA_900122145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/145/GCA_900122145.1_14722_7_90	-	2926STDY5723510
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.05654	39.7	-	CIEQ01	80	2249	2014	4/21/15	3/5/17	Scaffold	SC	SAMEA1020550	GCA_001329415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/415/GCA_001329415.1_6259_1_9	-	SN32926
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.15117	39.5	-	CHJH01	77	2373	2136	4/21/15	3/5/17	Scaffold	SC	SAMEA1020612	GCA_001329435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/435/GCA_001329435.1_6569_4_9	-	PT2236
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36989	65.6	-	FPTN01	86	4280	4086	11/23/16	3/14/17	Scaffold	SC	SAMEA2682763	GCA_900122155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/155/GCA_900122155.1_14722_7_91	-	2926STDY5723513
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.20014	50.6	-	NLFT01	140	5463	5099	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05439342	GCA_002225565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/565/GCA_002225565.1_ASM222556v1	-	MOD1-EC5748
Salmonella enterica subsp. enterica serovar Agona str. 34.H.09	1265641	PRJEB1096	189610	Proteobacteria	Gammaproteobacteria	4.78251	52	-	CASK01	153	4842	4602	2/15/13	2/26/17	Scaffold	ERI	SAMEA2271973	GCA_000388815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/815/GCA_000388815.1_34.H.09	23637636	34.H.09
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.86053	32.7	-	CTZF01	63	2993	2850	3/31/15	3/5/17	Contig	SC	SAMEA862634	GCA_001231925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/925/GCA_001231925.1_5364_6_11	-	HU11
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.82782	32.6	-	CTXF01	78	2954	2807	3/31/15	3/5/17	Contig	SC	SAMEA862652	GCA_001232005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/005/GCA_001232005.1_5083_7_9	-	IU10
Salmonella enterica subsp. enterica serovar Agona str. 35.H.08	1265669	PRJEB1097	189623	Proteobacteria	Gammaproteobacteria	4.7501	52	-	CASJ01	132	4799	4554	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272462	GCA_000388835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/835/GCA_000388835.1_35.H.08	23637636	35.H.08
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.97767	50.7	-	NLGE01	168	5162	4853	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05439294	GCA_002225585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/585/GCA_002225585.1_ASM222558v1	-	MOD1-EC5737
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32496	65.6	-	FPTP01	84	4242	4059	11/23/16	3/14/17	Scaffold	SC	SAMEA2682764	GCA_900122165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/165/GCA_900122165.1_14722_7_92	-	2926STDY5723514
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.05676	39.7	-	CIEU01	66	2262	2044	4/21/15	3/5/17	Scaffold	SC	SAMEA1020625	GCA_001329455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/455/GCA_001329455.1_6237_8_16	-	S-108
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.15804	39.6	-	CHCY01	38	2385	2145	4/21/15	3/5/17	Scaffold	SC	SAMEA1020698	GCA_001329475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/475/GCA_001329475.1_6570_3_11	-	SPN4000
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36716	65.6	-	FPTQ01	75	4276	4085	11/23/16	3/14/17	Scaffold	SC	SAMEA2682765	GCA_900122175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/175/GCA_900122175.1_14722_7_93	-	2926STDY5723515
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.19668	50.8	-	NLHR01	351	5500	5086	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452881	GCA_002225595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/595/GCA_002225595.1_ASM222559v1	-	MOD1-EC5694
Salmonella enterica subsp. enterica serovar Agona str. 36.H.00	1265617	PRJEB1098	189591	Proteobacteria	Gammaproteobacteria	4.79331	52	-	CASI01	150	4854	4617	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272707	GCA_000388855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/855/GCA_000388855.1_36.H.00	23637636	36.H.00
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.86938	32.7	-	CTYX01	77	3016	2868	3/31/15	3/5/17	Contig	SC	SAMEA862559	GCA_001232045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/045/GCA_001232045.1_5364_2_5	-	DEU17
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.80327	32.7	-	CUAT01	36	2899	2747	3/31/15	3/5/17	Contig	SC	SAMEA1030292	GCA_001232105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/105/GCA_001232105.1_6401_7_13	-	91/11785
Salmonella enterica subsp. enterica serovar Agona str. 37.F.02	1265651	PRJEB1099	189614	Proteobacteria	Gammaproteobacteria	4.73302	52.1	-	CASH01	151	4761	4547	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272321	GCA_000388875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/875/GCA_000388875.1_37.F.02	23637636	37.F.02
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.04416	50.7	-	NLFU01	232	5346	4957	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05439343	GCA_002225635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/635/GCA_002225635.1_ASM222563v1	-	MOD1-EC5747
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36761	65.6	-	FPTO01	90	4275	4081	11/23/16	3/14/17	Scaffold	SC	SAMEA2682766	GCA_900122185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/185/GCA_900122185.1_14722_7_94	-	2926STDY5723516
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.14785	39.6	-	CHJM01	77	2362	2116	4/21/15	3/5/17	Scaffold	SC	SAMEA1020772	GCA_001329515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/515/GCA_001329515.1_6569_5_19	-	PT814
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.23405	39.6	-	CIFI01	94	2462	2223	4/21/15	3/5/17	Scaffold	SC	SAMEA1020785	GCA_001329535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/535/GCA_001329535.1_6187_7_5	-	LMG2290
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37761	65.6	-	FPTR01	74	4279	4106	11/23/16	3/14/17	Scaffold	SC	SAMEA2682773	GCA_900122195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/195/GCA_900122195.1_14722_7_95	-	2926STDY5723524
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.9539	50.5	-	NLGC01	151	5180	4821	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05439292	GCA_002225655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/655/GCA_002225655.1_ASM222565v1	-	MOD1-EC5739
Salmonella enterica subsp. enterica serovar Agona str. 38.O.03	1265621	PRJEB1100	189594	Proteobacteria	Gammaproteobacteria	4.74497	52.1	-	CASG01	171	4790	4517	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272601	GCA_000388895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/895/GCA_000388895.1_38.O.03	23637636	38.O.03
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	3.0416	32.6	-	CTXT01	126	3245	3064	3/31/15	3/5/17	Contig	SC	SAMEA862550	GCA_001232505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/505/GCA_001232505.1_5139_7_8	-	M592
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.90933	32.7	-	CTXK01	151	3098	2934	3/31/15	3/5/17	Contig	SC	SAMEA862595	GCA_001232765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/765/GCA_001232765.1_5139_7_1	-	H482
Salmonella enterica subsp. enterica serovar Agona str. 39.O.03	1265647	PRJEB1101	198843	Proteobacteria	Gammaproteobacteria	4.76677	52	-	CATV01	141	5029	4352	4/24/13	2/26/17	Scaffold	ERI	SAMEA2272755	GCA_000388915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/915/GCA_000388915.1_39.O.03	23637636	39.O.03
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.07684	50.6	-	NLFV01	272	5384	4956	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05464501	GCA_002225665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/665/GCA_002225665.1_ASM222566v1	-	MOD1-EC5746
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36881	65.6	-	FPTS01	71	4270	4084	11/23/16	3/14/17	Scaffold	SC	SAMEA2683013	GCA_900122205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/205/GCA_900122205.1_14722_8_1	-	2926STDY5723766
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.20074	39.5	-	CHCU01	438	2455	2163	4/21/15	3/5/17	Scaffold	SC	SAMEA1020841	GCA_001329555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/555/GCA_001329555.1_6246_2_17	-	LMG804
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.11245	39.5	-	CHYL01	49	2322	2069	4/21/15	3/5/17	Scaffold	SC	SAMEA1020851	GCA_001329575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/575/GCA_001329575.1_6570_3_12	-	SPN4488
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32162	65.6	-	FPTT01	67	4238	4059	11/23/16	3/14/17	Scaffold	SC	SAMEA2683028	GCA_900122215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/215/GCA_900122215.1_14722_8_10	-	2926STDY5723781
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.88785	50.8	-	NLGD01	151	5090	4763	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05439293	GCA_002225685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/685/GCA_002225685.1_ASM222568v1	-	MOD1-EC5738
Salmonella enterica subsp. enterica serovar Agona str. 41.E.09	1265652	PRJEB1102	189615	Proteobacteria	Gammaproteobacteria	4.74339	52	-	CASF01	303	4876	4544	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272714	GCA_000388935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/935/GCA_000388935.1_41.E.09	23637636	41.E.09
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.82783	32.7	-	CUBN01	28	2942	2781	3/31/15	3/5/17	Contig	SC	SAMEA1030269	GCA_001233825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/825/GCA_001233825.1_6437_8_11	-	H182 MRSA
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.91525	32.7	-	CTXI01	151	3077	2933	3/31/15	3/5/17	Contig	SC	SAMEA862530	GCA_001233925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/925/GCA_001233925.1_5139_6_9	-	ES26
Salmonella enterica subsp. enterica serovar Agona str. 40.E.08	1265622	PRJEB1103	189595	Proteobacteria	Gammaproteobacteria	4.81553	52.1	-	CASE01	123	4899	4652	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272245	GCA_000388955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/955/GCA_000388955.1_40.E.08	23637636	40.E.08
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.8961	50.8	-	NLFW01	110	5107	4791	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05439344	GCA_002225715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/715/GCA_002225715.1_ASM222571v1	-	MOD1-EC5745
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36671	65.6	-	FPTV01	82	4267	4081	11/23/16	3/14/17	Scaffold	SC	SAMEA2683029	GCA_900122225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/225/GCA_900122225.1_14722_8_11	-	2926STDY5723782
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.1824	39.5	-	CHDO01	77	2415	2174	4/21/15	3/5/17	Scaffold	SC	SAMEA1408199	GCA_001329615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/615/GCA_001329615.1_7444_8_36	-	9908+13028
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.22311	39.5	-	CHDD01	100	2472	2214	4/21/15	3/5/17	Scaffold	SC	SAMEA1408200	GCA_001329635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/635/GCA_001329635.1_7444_8_37	-	9909+21117
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36697	65.6	-	FPTU01	80	4274	4068	11/23/16	3/14/17	Scaffold	SC	SAMEA2683031	GCA_900122235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/235/GCA_900122235.1_14722_8_12	-	2926STDY5723784
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.64445	50.7	-	NLFX01	160	4840	4507	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05439345	GCA_002225725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/725/GCA_002225725.1_ASM222572v1	-	MOD1-EC5744
Salmonella enterica subsp. enterica serovar Agona str. 42.E.09	1265648	PRJEB1104	189613	Proteobacteria	Gammaproteobacteria	4.73967	52	-	CASD01	298	4884	4550	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272368	GCA_000388975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/975/GCA_000388975.1_42.E.09	23637636	42.E.09
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.79499	32.7	-	CUAR01	28	2886	2754	3/31/15	3/5/17	Contig	SC	SAMEA1030323	GCA_001234025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/025/GCA_001234025.1_6401_7_11	-	91/10977
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.8687	32.7	-	CTYR01	77	3004	2858	3/31/15	3/5/17	Contig	SC	SAMEA862579	GCA_001234245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/245/GCA_001234245.1_5364_1_8	-	DEU8
Salmonella enterica subsp. enterica serovar Agona str. 43.E.09	1265670	PRJEB1105	189624	Proteobacteria	Gammaproteobacteria	4.7451	52.1	-	CASC01	145	4793	4554	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272363	GCA_000388995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/388/995/GCA_000388995.1_43.E.09	23637636	43.E.09
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.00298	50.5	-	NLFY01	198	5235	4834	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05439346	GCA_002225755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/755/GCA_002225755.1_ASM222575v1	-	MOD1-EC5743
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36038	65.6	-	FPTW01	85	4274	4067	11/23/16	3/14/17	Scaffold	SC	SAMEA2683032	GCA_900122245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/245/GCA_900122245.1_14722_8_13	-	2926STDY5723785
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21498	39.6	-	CGGC01	113	2456	2206	3/15/15	3/5/17	Scaffold	SC	SAMEA1408216	GCA_001329655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/655/GCA_001329655.1_7444_8_85	-	0503+03063
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.20748	39.6	-	CHJG01	102	2448	2202	4/21/15	3/5/17	Scaffold	SC	SAMEA1408218	GCA_001329675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/675/GCA_001329675.1_7444_8_67	-	0301+23540
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36693	65.6	-	FPTX01	83	4273	4072	11/23/16	3/14/17	Scaffold	SC	SAMEA2683033	GCA_900122255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/255/GCA_900122255.1_14722_8_14	-	2926STDY5723786
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.41522	50.6	-	NLFZ01	311	5779	5344	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05439347	GCA_002225765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/765/GCA_002225765.1_ASM222576v1	-	MOD1-EC5742
Salmonella enterica subsp. enterica serovar Agona str. 44.E.09	1265624	PRJEB1106	189597	Proteobacteria	Gammaproteobacteria	4.73906	52	-	CASB01	326	4894	4545	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272251	GCA_000389015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/015/GCA_000389015.1_44.E.09	23637636	44.E.09
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.86473	32.6	-	CTXE01	158	3018	2848	3/31/15	3/5/17	Contig	SC	SAMEA862563	GCA_001234525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/525/GCA_001234525.1_5139_6_7	-	IU20
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.88058	32.7	-	CTZO01	176	3044	2893	3/31/15	3/5/17	Contig	SC	SAMEA862624	GCA_001234625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/625/GCA_001234625.1_5364_6_6	-	HU6
Salmonella enterica subsp. enterica serovar Agona str. 45.E.09	1265653	PRJEB1107	189616	Proteobacteria	Gammaproteobacteria	4.73624	52	-	CASA01	229	4817	4550	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272740	GCA_000389035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/035/GCA_000389035.1_45.E.09	23637636	45.E.09
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.71974	50.6	-	NLGU01	112	4849	4568	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440440	GCA_002225785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/785/GCA_002225785.1_ASM222578v1	-	MOD1-EC5720
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3462	65.6	-	FPTY01	75	4279	4086	11/23/16	3/14/17	Scaffold	SC	SAMEA2683034	GCA_900122265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/265/GCA_900122265.1_14722_8_15	-	2926STDY5723787
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.22283	39.5	-	CHDI01	96	2468	2213	4/21/15	3/5/17	Scaffold	SC	SAMEA1408222	GCA_001329715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/715/GCA_001329715.1_7444_8_87	-	0506+29167
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.19477	39.6	-	CIFA01	117	2402	2161	4/21/15	3/5/17	Scaffold	SC	SAMEA1408253	GCA_001329735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/735/GCA_001329735.1_7444_8_82	-	0412+17021
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.6556	63.8	-	FPTZ01	449	4371	4161	11/23/16	3/14/17	Scaffold	SC	SAMEA2683035	GCA_900122275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/275/GCA_900122275.1_14722_8_16	-	2926STDY5723788
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.28955	50.6	-	NLGQ01	277	5772	5261	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452907	GCA_002225815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/815/GCA_002225815.1_ASM222581v1	-	MOD1-EC5725
Salmonella enterica subsp. enterica serovar Agona str. 46.E.09	1265623	PRJEB1108	189596	Proteobacteria	Gammaproteobacteria	4.73699	52	-	CARZ01	221	4816	4548	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272137	GCA_000389055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/055/GCA_000389055.1_46.E.09	23637636	46.E.09
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.73098	32.7	-	CUBR01	26	2824	2652	3/31/15	3/5/17	Contig	SC	SAMEA1030251	GCA_001234725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/725/GCA_001234725.1_6437_8_13	-	NL 0113 99-5
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	3.01261	32.6	-	CTXQ01	141	3203	3044	3/31/15	3/5/17	Contig	SC	SAMEA862545	GCA_001234765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/765/GCA_001234765.1_5139_7_3	-	M116
Salmonella enterica subsp. enterica serovar Agona str. 48.E.08	1265675	PRJEB1110	189628	Proteobacteria	Gammaproteobacteria	4.7469	52.1	-	CARY01	148	4791	4547	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272635	GCA_000389075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/075/GCA_000389075.1_48.E.08	23637636	48.E.08
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.03804	50.8	-	NLGA01	118	5229	4904	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05439348	GCA_002225835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/835/GCA_002225835.1_ASM222583v1	-	MOD1-EC5741
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36555	65.6	-	FPUA01	83	4271	4073	11/23/16	3/14/17	Scaffold	SC	SAMEA2683036	GCA_900122285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/285/GCA_900122285.1_14722_8_17	-	2926STDY5723789
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21743	39.6	-	CHCX01	87	2454	2198	4/21/15	3/5/17	Scaffold	SC	SAMEA1408267	GCA_001329755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/755/GCA_001329755.1_7444_8_35	-	9907+14172
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.22484	39.5	-	CHYY01	89	2457	2217	4/21/15	3/5/17	Scaffold	SC	SAMEA1408281	GCA_001329775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/775/GCA_001329775.1_7444_8_26	-	9807+09096
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.34913	65.6	-	FPUB01	84	4278	4083	11/23/16	3/14/17	Scaffold	SC	SAMEA2683014	GCA_900122295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/295/GCA_900122295.1_14722_8_2	-	2926STDY5723767
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.15181	50.6	-	NLHE01	246	5439	4957	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452913	GCA_002225845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/845/GCA_002225845.1_ASM222584v1	-	MOD1-EC5708
Salmonella enterica subsp. enterica serovar Agona str. 49.E.09	1265625	PRJEB1111	198839	Proteobacteria	Gammaproteobacteria	4.74835	52.1	-	CATU01	152	4811	4538	4/24/13	2/26/17	Scaffold	ERI	SAMEA2272022	GCA_000389095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/095/GCA_000389095.1_49.E.09	23637636	49.E.09
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.71986	32.7	-	CTSA01	48	2779	2649	3/31/15	3/5/17	Contig	SC	SAMEA734738	GCA_001234925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/925/GCA_001234925.1_4351_6_4	-	07-03354-2
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	3.00376	32.7	-	CTXN01	147	3180	3029	3/31/15	3/5/17	Contig	SC	SAMEA862544	GCA_001235205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/205/GCA_001235205.1_5139_7_12	-	Na21
Salmonella enterica subsp. enterica serovar Agona str. 50.E.08	1265662	PRJEB1112	189619	Proteobacteria	Gammaproteobacteria	4.78394	52	-	CARX01	155	4805	4474	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272351	GCA_000389115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/115/GCA_000389115.1_50.E.08	23637636	50.E.08
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.05928	50.5	-	NLGB01	160	5316	4953	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05439349	GCA_002225865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/865/GCA_002225865.1_ASM222586v1	-	MOD1-EC5740
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3219	65.6	-	FPUC01	73	4246	4058	11/23/16	3/14/17	Scaffold	SC	SAMEA2683039	GCA_900122305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/305/GCA_900122305.1_14722_8_20	-	2926STDY5723792
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.22389	39.5	-	CGAY01	99	2472	2217	3/15/15	3/5/17	Scaffold	SC	SAMEA1408287	GCA_001329795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/795/GCA_001329795.1_7444_8_24	-	9803+09178
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21906	39.5	-	CGAO01	85	2456	2210	3/15/15	3/5/17	Scaffold	SC	SAMEA1408289	GCA_001329815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/815/GCA_001329815.1_7444_8_25	-	9806+08086
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32446	65.6	-	FPUD01	86	4249	4066	11/23/16	3/14/17	Scaffold	SC	SAMEA2683040	GCA_900122315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/315/GCA_900122315.1_14722_8_21	-	2926STDY5723793
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.07992	50.6	-	NLHD01	183	5342	4900	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452912	GCA_002225885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/885/GCA_002225885.1_ASM222588v1	-	MOD1-EC5709
Salmonella enterica subsp. enterica serovar Agona str. 51.E.09	1265628	PRJEB1113	189600	Proteobacteria	Gammaproteobacteria	4.7382	52	-	CARW01	222	4809	4556	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272743	GCA_000389135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/135/GCA_000389135.1_51.E.09	23637636	51.E.09
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.93791	32.6	-	CTXA01	73	3087	2969	3/31/15	3/5/17	Contig	SC	SAMEA862608	GCA_001236065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/065/GCA_001236065.1_5119_1_4	-	MAL215
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.87525	32.7	-	CTYJ01	74	3010	2858	3/31/15	3/5/17	Contig	SC	SAMEA862583	GCA_001236505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/505/GCA_001236505.1_5364_1_10	-	DEU10
Salmonella enterica subsp. enterica serovar Agona str. 52.F.08	1265655	PRJEB1114	189617	Proteobacteria	Gammaproteobacteria	4.7135	52.1	-	CARV01	142	4738	4522	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272256	GCA_000389155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/155/GCA_000389155.1_52.F.08	23637636	52.F.08
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.80175	50.7	-	NLGF01	115	4961	4646	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05439295	GCA_002225915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/915/GCA_002225915.1_ASM222591v1	-	MOD1-EC5736
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37512	65.6	-	FPUE01	79	4277	4091	11/23/16	3/14/17	Scaffold	SC	SAMEA2683041	GCA_900122325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/325/GCA_900122325.1_14722_8_22	-	2926STDY5723794
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21403	39.6	-	CGFX01	102	2465	2208	3/15/15	3/11/17	Scaffold	SC	SAMEA1408340	GCA_001329835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/835/GCA_001329835.1_7444_8_48	-	0011+09030
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.20813	39.6	-	CHDJ01	92	2441	2198	4/21/15	3/11/17	Scaffold	SC	SAMEA1408357	GCA_001329855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/855/GCA_001329855.1_7444_8_44	-	0006+20010
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36617	65.6	-	FPUF01	77	4277	4074	11/23/16	3/14/17	Scaffold	SC	SAMEA2683042	GCA_900122335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/335/GCA_900122335.1_14722_8_23	-	2926STDY5723795
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.68139	50.5	-	NLGG01	90	4813	4502	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05439296	GCA_002225935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/935/GCA_002225935.1_ASM222593v1	-	MOD1-EC5735
Salmonella enterica subsp. enterica serovar Agona str. 53.F.08	1265676	PRJEB1115	189629	Proteobacteria	Gammaproteobacteria	4.71278	52.1	-	CARU01	141	4758	4518	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272640	GCA_000389175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/175/GCA_000389175.1_53.F.08	23637636	53.F.08
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.79652	32.7	-	CUAI01	30	2911	2746	3/31/15	3/5/17	Contig	SC	SAMEA1030324	GCA_001236745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/745/GCA_001236745.1_6401_6_22	-	930.02
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.85546	32.7	-	CTZJ01	71	2980	2852	3/31/15	3/5/17	Contig	SC	SAMEA862625	GCA_001236885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/885/GCA_001236885.1_5364_6_5	-	HU5
Salmonella enterica subsp. enterica serovar Agona str. 54.O.08	1265626	PRJEB1116	189598	Proteobacteria	Gammaproteobacteria	4.71167	52.1	-	CART01	146	4748	4516	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272141	GCA_000389195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/195/GCA_000389195.1_54.O.08	23637636	54.O.08
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.12393	50.4	-	NLHG01	255	5533	5013	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452915	GCA_002225945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/945/GCA_002225945.1_ASM222594v1	-	MOD1-EC5706
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3225	65.6	-	FPUG01	80	4247	4058	11/23/16	3/14/17	Scaffold	SC	SAMEA2683043	GCA_900122345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/345/GCA_900122345.1_14722_8_24	-	2926STDY5723796
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.17821	39.6	-	CGBB01	146	2403	2181	3/15/15	3/11/17	Scaffold	SC	SAMEA682255	GCA_001329915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/915/GCA_001329915.1_5390_1_6	-	spnIC10
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.1926	39.6	-	CFKZ01	169	2402	2180	3/15/15	3/11/17	Scaffold	SC	SAMEA682257	GCA_001329935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/935/GCA_001329935.1_5390_1_5	-	spnIC19
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3639	65.6	-	FPUH01	75	4274	4075	11/23/16	3/14/17	Scaffold	SC	SAMEA2683044	GCA_900122355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/355/GCA_900122355.1_14722_8_25	-	2926STDY5723797
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.29084	50.6	-	NLGR01	431	5673	5164	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440437	GCA_002225965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/965/GCA_002225965.1_ASM222596v1	-	MOD1-EC5723
Salmonella enterica subsp. enterica serovar Agona str. 55.U.08	1265663	PRJEB1117	189620	Proteobacteria	Gammaproteobacteria	4.71047	52.1	-	CARS01	138	4749	4515	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272720	GCA_000389215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/215/GCA_000389215.1_55.U.08	23637636	55.U.08
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.79863	32.7	-	CUAZ01	28	2882	2753	3/31/15	3/5/17	Contig	SC	SAMEA1030291	GCA_001237045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/045/GCA_001237045.1_6401_7_2	-	93/3697
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.85709	32.7	-	CTZG01	88	2984	2838	3/31/15	3/5/17	Contig	SC	SAMEA862620	GCA_001237305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/305/GCA_001237305.1_5364_6_2	-	MU20
Salmonella enterica subsp. enterica serovar Agona str. 56.O.08	1265629	PRJEB1118	189601	Proteobacteria	Gammaproteobacteria	4.70919	52.1	-	CARR01	139	4745	4514	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272231	GCA_000389235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/235/GCA_000389235.1_56.O.08	23637636	56.O.08
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.17367	50.6	-	NLGH01	169	5404	5060	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05439297	GCA_002225985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/985/GCA_002225985.1_ASM222598v1	-	MOD1-EC5734
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3234	65.6	-	FPUI01	77	4245	4055	11/23/16	3/14/17	Scaffold	SC	SAMEA2683045	GCA_900122365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/365/GCA_900122365.1_14722_8_26	-	2926STDY5723798
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.16784	39.5	-	CGAR01	115	2392	2177	3/15/15	3/11/17	Scaffold	SC	SAMEA682259	GCA_001329955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/955/GCA_001329955.1_5392_5_12	-	spnIC43
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.19267	39.7	-	CHJL01	215	2409	2155	4/21/15	3/11/17	Scaffold	SC	SAMEA682262	GCA_001329975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/975/GCA_001329975.1_5390_1_2	-	spnIC41
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3661	65.6	-	FPUJ01	84	4278	4083	11/23/16	3/14/17	Scaffold	SC	SAMEA2683046	GCA_900122375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/375/GCA_900122375.1_14722_8_27	-	2926STDY5723799
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.89539	50.7	-	NLGS01	98	5111	4849	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440438	GCA_002226015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/015/GCA_002226015.1_ASM222601v1	-	MOD1-EC5722
Salmonella enterica subsp. enterica serovar Agona str. 57.A.08	1265656	PRJEB1119	198844	Proteobacteria	Gammaproteobacteria	4.70368	52.1	-	CATT01	166	4816	4429	4/24/13	2/26/17	Scaffold	ERI	SAMEA2271932	GCA_000389255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/255/GCA_000389255.1_57.A.08	23637636	57.A.08
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.92476	32.6	-	CTWN01	127	3091	2927	3/31/15	3/5/17	Contig	SC	SAMEA862637	GCA_001237365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/365/GCA_001237365.1_5083_6_2	-	HU14
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.79869	32.7	-	CUBF01	28	2891	2752	3/31/15	3/5/17	Contig	SC	SAMEA1030278	GCA_001237505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/505/GCA_001237505.1_6401_7_3	-	91/10982
Salmonella enterica subsp. enterica serovar Agona str. 58.E.08	1265677	PRJEB1120	189630	Proteobacteria	Gammaproteobacteria	4.71256	52.1	-	CARQ01	137	4759	4515	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272337	GCA_000389275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/275/GCA_000389275.1_58.E.08	23637636	58.E.08
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.9517	50.8	-	NLHH01	134	5198	4846	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452916	GCA_002226025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/025/GCA_002226025.1_ASM222602v1	-	MOD1-EC5705
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36601	65.6	-	FPUK01	90	4277	4078	11/23/16	3/14/17	Scaffold	SC	SAMEA2683047	GCA_900122385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/385/GCA_900122385.1_14722_8_28	-	2926STDY5723800
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.0214	39.7	-	CHJI01	97	2205	2009	4/21/15	3/11/17	Scaffold	SC	SAMEA682281	GCA_001329995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/329/995/GCA_001329995.1_5381_2_7	-	09B05212
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.15609	40.1	-	CHYS01	254	2341	2080	4/21/15	3/11/17	Scaffold	SC	SAMEA682297	GCA_001330015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/015/GCA_001330015.1_5392_5_6	-	spnIC55
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.6071	64.2	-	FPUL01	406	4353	4136	11/23/16	3/14/17	Scaffold	SC	SAMEA2683049	GCA_900122395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/395/GCA_900122395.1_14722_8_30	-	2926STDY5723802
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.95578	50.7	-	NLHF01	279	5403	4816	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452914	GCA_002226055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/055/GCA_002226055.1_ASM222605v1	-	MOD1-EC5707
Salmonella enterica subsp. enterica serovar Agona str. 59.F.08	1265631	PRJEB1121	189603	Proteobacteria	Gammaproteobacteria	4.71001	52.1	-	CARP01	134	4759	4522	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272035	GCA_000389295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/295/GCA_000389295.1_59.F.08	23637636	59.F.08
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.79769	32.7	-	CUBE01	27	2884	2753	3/31/15	3/5/17	Contig	SC	SAMEA1030267	GCA_001238225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/225/GCA_001238225.1_6401_7_6	-	91/11046
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.80276	32.7	-	CUAP01	27	2890	2754	3/31/15	3/5/17	Contig	SC	SAMEA1030265	GCA_001238685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/685/GCA_001238685.1_6401_7_10	-	91/10312
Salmonella enterica subsp. enterica serovar Agona str. 60.O.08	1265664	PRJEB1122	189621	Proteobacteria	Gammaproteobacteria	4.71416	52.1	-	CARO01	152	4767	4486	2/15/13	2/26/17	Scaffold	ERI	SAMEA2271935	GCA_000389315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/315/GCA_000389315.1_60.O.08	23637636	60.O.08
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.87127	50.5	-	NLGJ01	101	5048	4737	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05439299	GCA_002226065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/065/GCA_002226065.1_ASM222606v1	-	MOD1-EC5732
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32222	65.6	-	FPUN01	78	4242	4062	11/23/16	3/14/17	Scaffold	SC	SAMEA2683050	GCA_900122405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/405/GCA_900122405.1_14722_8_31	-	2926STDY5723803
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.18529	39.5	-	CGAM01	72	2403	2190	3/15/15	3/11/17	Scaffold	SC	SAMEA682299	GCA_001330035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/035/GCA_001330035.1_5392_5_3	-	spnIC59
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.03752	39.9	-	CIEY01	111	2219	1985	4/21/15	3/11/17	Scaffold	SC	SAMEA682312	GCA_001330075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/075/GCA_001330075.1_5468_2_9	-	Tw01_0059
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36042	65.6	-	FPUM01	83	4260	4071	11/23/16	3/14/17	Scaffold	SC	SAMEA2683051	GCA_900122415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/415/GCA_900122415.1_14722_8_32	-	2926STDY5723804
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.79703	50.7	-	NLGK01	129	4984	4628	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05439300	GCA_002226095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/095/GCA_002226095.1_ASM222609v1	-	MOD1-EC5731
Salmonella enterica subsp. enterica serovar Agona str. 61.O.08	1265630	PRJEB1123	189602	Proteobacteria	Gammaproteobacteria	4.71751	52.1	-	CARN01	160	4758	4454	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272422	GCA_000389335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/335/GCA_000389335.1_61.O.08	23637636	61.O.08
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.75447	32.7	-	CUCD01	37	2855	2687	3/31/15	3/5/17	Contig	SC	SAMEA1030150	GCA_001238725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/725/GCA_001238725.1_6437_8_5	-	RH 0600 0125 09
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.79253	32.7	-	CUAV01	36	2885	2751	3/31/15	3/5/17	Contig	SC	SAMEA1030157	GCA_001238845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/845/GCA_001238845.1_6401_7_14	-	90/9576
Salmonella enterica subsp. enterica serovar Agona str. 64.H.00	1265632	PRJEB1126	189604	Proteobacteria	Gammaproteobacteria	4.77249	52	-	CARK01	169	4834	4586	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272159	GCA_000389395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/395/GCA_000389395.1_64.H.00	23637636	64.H.00
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.06988	50.6	-	NLGM01	207	5349	4915	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05439302	GCA_002226115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/115/GCA_002226115.1_ASM222611v1	-	MOD1-EC5729
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.322	65.6	-	FPUP01	73	4247	4061	11/23/16	3/14/17	Scaffold	SC	SAMEA2683052	GCA_900122425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/425/GCA_900122425.1_14722_8_33	-	2926STDY5723806
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.05657	39.9	-	CFNS01	131	2256	2044	3/15/15	3/11/17	Scaffold	SC	SAMEA682333	GCA_001330095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/095/GCA_001330095.1_5381_1_6	-	09B02518
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.2686	39.9	-	CHDF01	90	2529	2289	4/21/15	3/11/17	Scaffold	SC	SAMEA682335	GCA_001330115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/115/GCA_001330115.1_5381_1_8	-	09B02733
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36565	65.5	-	FPUO01	88	4281	4059	11/23/16	3/14/17	Scaffold	SC	SAMEA2683053	GCA_900122435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/435/GCA_900122435.1_14722_8_34	-	2926STDY5723807
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.64884	50.8	-	NLGO01	172	4810	4498	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05439304	GCA_002226135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/135/GCA_002226135.1_ASM222613v1	-	MOD1-EC5727
Salmonella enterica subsp. enterica serovar Agona str. 65.H.72	1265671	PRJEB1127	189625	Proteobacteria	Gammaproteobacteria	4.8292	52.1	-	CARJ01	206	4865	4645	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272579	GCA_000389415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/415/GCA_000389415.1_65.H.72	23637636	65.H.72
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.85168	32.7	-	CTWC01	115	2999	2832	3/31/15	3/5/17	Contig	SC	SAMEA862639	GCA_001238925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/925/GCA_001238925.1_5083_6_8	-	HU21
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	3.0004	32.6	-	CTXZ01	110	3173	3019	3/31/15	3/5/17	Contig	SC	SAMEA862587	GCA_001239085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/085/GCA_001239085.1_5197_1_7	-	H216
Salmonella enterica subsp. enterica serovar Agona str. 66.F.99	1265634	PRJEB1128	189606	Proteobacteria	Gammaproteobacteria	4.7867	52	-	CARI01	169	4835	4590	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272083	GCA_000389435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/435/GCA_000389435.1_66.F.99	23637636	66.F.99
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.07821	50.6	-	NLGV01	197	5316	4924	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440441	GCA_002226155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/155/GCA_002226155.1_ASM222615v1	-	MOD1-EC5718
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32281	65.6	-	FPUQ01	76	4238	4056	11/23/16	3/14/17	Scaffold	SC	SAMEA2683054	GCA_900122445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/445/GCA_900122445.1_14722_8_35	-	2926STDY5723808
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.03651	39.7	-	CHJN01	80	2241	2044	4/21/15	3/11/17	Scaffold	SC	SAMEA682336	GCA_001330135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/135/GCA_001330135.1_5381_1_7	-	09B02732
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.10535	39.8	-	CIFC01	276	2257	2089	4/21/15	3/11/17	Scaffold	SC	SAMEA682338	GCA_001330155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/155/GCA_001330155.1_5381_1_9	-	09B02735
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36961	65.6	-	FPUS01	76	4275	4084	11/23/16	3/14/17	Scaffold	SC	SAMEA2683055	GCA_900122455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/455/GCA_900122455.1_14722_8_36	-	2926STDY5723809
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.27565	50.7	-	NLHS01	427	5502	5099	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452882	GCA_002226175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/175/GCA_002226175.1_ASM222617v1	-	MOD1-EC5693
Salmonella enterica subsp. enterica serovar Agona str. 67.H.09	1265667	PRJEB1129	198848	Proteobacteria	Gammaproteobacteria	4.80333	52	-	CATS01	167	4858	4617	4/24/13	2/26/17	Scaffold	ERI	SAMEA2272350	GCA_000389455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/455/GCA_000389455.1_67.H.09	23637636	67.H.09
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.80203	32.7	-	CTZR01	32	2904	2760	3/31/15	3/5/17	Contig	SC	SAMEA1030162	GCA_001239385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/385/GCA_001239385.1_6401_6_18	-	723.07
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.93164	32.6	-	CTWU01	113	3083	2910	3/31/15	3/5/17	Contig	SC	SAMEA862613	GCA_001239585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/585/GCA_001239585.1_5119_1_1	-	M705
Salmonella enterica subsp. enterica serovar Agona str. 68.U.05	1265620	PRJEB1130	189593	Proteobacteria	Gammaproteobacteria	4.75879	52	-	CARG01	136	4794	4555	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272198	GCA_000389475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/475/GCA_000389475.1_68.U.05	23637636	68.U.05
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.94701	50.6	-	NLGW01	212	5186	4846	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440442	GCA_002226195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/195/GCA_002226195.1_ASM222619v1	-	MOD1-EC5717
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36704	65.6	-	FPUR01	69	4269	4078	11/23/16	3/14/17	Scaffold	SC	SAMEA2683057	GCA_900122465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/465/GCA_900122465.1_14722_8_37	-	2926STDY5723811
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.03579	39.8	-	CVIF01	124	2189	2000	4/2/15	3/11/17	Scaffold	SC	SAMEA682341	GCA_001330175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/175/GCA_001330175.1_5468_1_3	-	K01_99124
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.05425	39.9	-	CHCZ01	127	2204	2018	4/21/15	3/5/17	Scaffold	SC	SAMEA682346	GCA_001330255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/255/GCA_001330255.1_5381_1_1	-	09B01708
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36545	65.6	-	FPUT01	87	4275	4073	11/23/16	3/14/17	Scaffold	SC	SAMEA2683060	GCA_900122475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/475/GCA_900122475.1_14722_8_39	-	2926STDY5723814
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.12434	50.6	-	NLGX01	250	5308	4928	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440443	GCA_002226215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/215/GCA_002226215.1_ASM222621v1	-	MOD1-EC5716
Salmonella enterica subsp. enterica serovar Agona str. 69.H.06	1265633	PRJEB1131	189605	Proteobacteria	Gammaproteobacteria	4.82278	52	-	CARF01	181	4895	4608	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272722	GCA_000389495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/495/GCA_000389495.1_69.H.06	23637636	69.H.06
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92465	32.6	-	CSJG01	32	3096	2963	3/23/15	3/5/17	Contig	SC	SAMEA1324735	GCA_001262255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/255/GCA_001262255.1_7738_3_6	-	USFL194
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.91751	32.7	-	CSGF01	34	3086	2963	3/23/15	3/5/17	Contig	SC	SAMEA1324573	GCA_001262375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/375/GCA_001262375.1_7738_4_21	-	USFL302
Salmonella enterica subsp. enterica serovar Agona str. 70.E.05	1265672	PRJEB1132	189626	Proteobacteria	Gammaproteobacteria	4.81918	52	-	CARE01	155	4879	4634	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272591	GCA_000389515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/515/GCA_000389515.1_70.E.05	23637636	70.E.05
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.81128	50.8	-	NLGY01	154	4968	4686	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440444	GCA_002226235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/235/GCA_002226235.1_ASM222623v1	-	MOD1-EC5715
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35733	65.6	-	FPUU01	65	4262	4072	11/23/16	3/14/17	Scaffold	SC	SAMEA2683017	GCA_900122485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/485/GCA_900122485.1_14722_8_4	-	2926STDY5723770
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.15834	39.5	-	CHDE01	84	2380	2171	4/21/15	3/5/17	Scaffold	SC	SAMEA682348	GCA_001330275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/275/GCA_001330275.1_5392_6_3	-	spnIC145
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.06867	39.7	-	CHJJ01	78	2277	2074	4/21/15	3/5/17	Scaffold	SC	SAMEA682352	GCA_001330315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/315/GCA_001330315.1_5366_8_5	-	09B01073
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32121	65.6	-	FPUX01	71	4248	4062	11/23/16	3/14/17	Scaffold	SC	SAMEA2683063	GCA_900122495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/495/GCA_900122495.1_14722_8_41	-	2926STDY5723817
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.1909	50.7	-	NLHQ01	330	5324	4975	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452880	GCA_002226255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/255/GCA_002226255.1_ASM222625v1	-	MOD1-EC5695
Salmonella enterica subsp. enterica serovar Agona str. 71.E.05	1265635	PRJEB1133	189607	Proteobacteria	Gammaproteobacteria	4.72855	52.1	-	CARD01	154	4773	4522	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272009	GCA_000389535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/535/GCA_000389535.1_71.E.05	23637636	71.E.05
Staphylococcus aureus	1280	PRJNA293432	293432	Terrabacteria group	Firmicutes	2.7756	32.8	-	LIPH01	51	2895	2723	9/15/15	3/5/17	Contig	University of Copenhagen	SAMN04002937	GCA_001281605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/605/GCA_001281605.1_ASM128160v1	26494663	S54F9
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.92093	32.6	-	CYJN01	22	3117	2968	9/4/15	3/5/17	Contig	WTSI	SAMEA2063840	GCA_001288945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/945/GCA_001288945.1_10050_6_94	-	2588STDY5514607
Salmonella enterica subsp. enterica serovar Agona str. 72.A.52	1265674	PRJEB1134	189627	Proteobacteria	Gammaproteobacteria	4.70388	52.1	-	CARC01	203	4754	4521	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272091	GCA_000389555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/555/GCA_000389555.1_72.A.52	23637636	72.A.52
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.87928	50.8	-	NLGZ01	161	5103	4757	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440445	GCA_002226275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/275/GCA_002226275.1_ASM222627v1	-	MOD1-EC5714
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37205	65.5	-	FPUV01	84	4273	4084	11/23/16	3/14/17	Scaffold	SC	SAMEA2683061	GCA_900122505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/505/GCA_900122505.1_14722_8_40	-	2926STDY5723815
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.07496	39.7	-	CHDH01	119	2279	2062	4/21/15	3/5/17	Scaffold	SC	SAMEA682354	GCA_001330335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/335/GCA_001330335.1_5366_8_11	-	09B01303
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	1.97979	39.9	-	CGAV01	191	2105	1935	3/15/15	3/5/17	Scaffold	SC	SAMEA682356	GCA_001330355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/355/GCA_001330355.1_5366_8_9	-	09B01296
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32141	65.6	-	FPVB01	75	4244	4055	11/23/16	3/14/17	Scaffold	SC	SAMEA2683065	GCA_900122515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/515/GCA_900122515.1_14722_8_43	-	2926STDY5723819
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.90895	50.6	-	NLGT01	177	5217	4810	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440439	GCA_002226295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/295/GCA_002226295.1_ASM222629v1	-	MOD1-EC5721
Salmonella enterica subsp. enterica serovar Agona str. 73.H.09	1265627	PRJEB1135	189599	Proteobacteria	Gammaproteobacteria	4.76014	52.1	-	CARB01	138	4803	4590	2/15/13	2/26/17	Scaffold	ERI	SAMEA2272203	GCA_000389575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/389/575/GCA_000389575.1_73.H.09	23637636	73.H.09
Staphylococcus aureus	1280	PRJNA283747	283747	Terrabacteria group	Firmicutes	2.78445	32.7	-	LFNL01	33	2895	2778	9/23/15	3/5/17	Contig	"Noguchi Memorial Institute for Medical Research, University of Ghana"	SAMN03658594	GCA_001297285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/285/GCA_001297285.1_ASM129728v1	26360794	BU_W7A_t11
Staphylococcus aureus	1280	PRJNA283747	283747	Terrabacteria group	Firmicutes	2.85469	32.8	-	LFMG01	34	3029	2868	9/23/15	3/5/17	Contig	"Noguchi Memorial Institute for Medical Research, University of Ghana"	SAMN03658588	GCA_001297295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/295/GCA_001297295.1_ASM129729v1	26360794	BU_G0201_t8
Salmonella enterica subsp. salamae str. DMA-1	1346789	PRJNA208536	208536	Proteobacteria	Gammaproteobacteria	4.82529	52.1	-	ATFA01	32	4933	4694	7/1/13	2/26/17	Scaffold	CSIR-IMTECH	SAMN02415230	GCA_000416565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/416/565/GCA_000416565.1_Salmonella_enterica_subsp._salamae_strain_DMA-1	-	DMA-1
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.66448	50.5	-	NLGI01	115	4814	4478	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05439298	GCA_002226315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/315/GCA_002226315.1_ASM222631v1	-	MOD1-EC5733
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36303	65.6	-	FPUW01	88	4275	4071	11/23/16	3/14/17	Scaffold	SC	SAMEA2683064	GCA_900122525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/525/GCA_900122525.1_14722_8_42	-	2926STDY5723818
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.04013	39.8	-	CVIO01	96	2198	2014	4/2/15	3/5/17	Scaffold	SC	SAMEA682359	GCA_001330375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/375/GCA_001330375.1_5468_1_5	-	K01_99219
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.06713	39.9	-	CFIM01	230	2218	2043	3/15/15	3/5/17	Scaffold	SC	SAMEA682361	GCA_001330395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/395/GCA_001330395.1_5366_6_10	-	08B09150
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37172	65.6	-	FPUY01	73	4274	4079	11/23/16	3/14/17	Scaffold	SC	SAMEA2683066	GCA_900122535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/535/GCA_900122535.1_14722_8_44	-	2926STDY5723820
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.98948	50.5	-	NLHA01	128	5211	4844	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452909	GCA_002226325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/325/GCA_002226325.1_ASM222632v1	-	MOD1-EC5712
Salmonella enterica subsp. enterica serovar Cubana str. 76814	1192560	PRJNA226626	226626	Proteobacteria	Gammaproteobacteria	4.92731	52.2	-	AYUE01	169	4978	4739	12/10/13	3/1/17	Scaffold	University of California	SAMN02471687	GCA_000505845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/845/GCA_000505845.2_S_enterica_enterica_Cubana_Ver1	-	76814
Staphylococcus aureus	1280	PRJNA283747	283747	Terrabacteria group	Firmicutes	2.85538	32.8	-	LFMH01	43	3025	2866	9/23/15	3/5/17	Contig	"Noguchi Memorial Institute for Medical Research, University of Ghana"	SAMN03658590	GCA_001297305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/305/GCA_001297305.1_ASM129730v1	26360794	BU_G0202_t2
Staphylococcus aureus	1280	PRJNA283747	283747	Terrabacteria group	Firmicutes	2.81755	32.6	-	LFNO01	32	2961	2808	9/23/15	3/5/17	Contig	"Noguchi Memorial Institute for Medical Research, University of Ghana"	SAMN03658597	GCA_001297365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/365/GCA_001297365.1_ASM129736v1	26360794	BU_W6_t1
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. FCAV198	1331043	PRJNA201418	201418	Proteobacteria	Gammaproteobacteria	4.78434	52.2	-	AZRG01	128	4892	4373	1/23/14	2/26/17	Scaffold	none	SAMN02169239	GCA_000521885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/521/885/GCA_000521885.1_SP-v1	24558231	FCAV198
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.05462	50.7	-	NLHB01	142	5304	4951	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452910	GCA_002226355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/355/GCA_002226355.1_ASM222635v1	-	MOD1-EC5711
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37849	65.6	-	FPUZ01	74	4273	4092	11/23/16	3/14/17	Scaffold	SC	SAMEA2683067	GCA_900122545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/545/GCA_900122545.1_14722_8_45	-	2926STDY5723821
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.02959	39.7	-	CGAW01	66	2189	2012	3/15/15	3/5/17	Scaffold	SC	SAMEA682366	GCA_001330415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/415/GCA_001330415.1_5366_6_2	-	08B07219
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.03778	39.8	-	CGGE01	206	2167	1994	3/15/15	3/5/17	Scaffold	SC	SAMEA682367	GCA_001330435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/435/GCA_001330435.1_5366_6_1	-	08B07218
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36696	65.6	-	FPVA01	79	4262	4077	11/23/16	3/14/17	Scaffold	SC	SAMEA2683068	GCA_900122555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/555/GCA_900122555.1_14722_8_46	-	2926STDY5723822
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.039	50.7	-	NLHC01	140	5272	4894	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452911	GCA_002226375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/375/GCA_002226375.1_ASM222637v1	-	MOD1-EC5710
Salmonella enterica subsp. enterica serovar Agona str. 47.E.09	1265654	PRJEB1109	201226	Proteobacteria	Gammaproteobacteria	4.76945	52	-	CAAD01	278	4890	4581	5/10/13	2/26/17	Scaffold	ERI	SAMEA3138965	GCA_000604425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/604/425/GCA_000604425.1_47.E.09	-	47.E.09
Staphylococcus aureus	1280	PRJNA283747	283747	Terrabacteria group	Firmicutes	2.83975	32.8	-	LFNH01	38	3000	2851	9/23/15	3/5/17	Contig	"Noguchi Memorial Institute for Medical Research, University of Ghana"	SAMN03658592	GCA_001297395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/395/GCA_001297395.1_ASM129739v1	26360794	BU_W13_t1
Staphylococcus aureus	1280	PRJNA283747	283747	Terrabacteria group	Firmicutes	2.85508	32.8	-	LFNI01	33	3030	2869	9/23/15	3/5/17	Contig	"Noguchi Memorial Institute for Medical Research, University of Ghana"	SAMN03658589	GCA_001297415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/415/GCA_001297415.1_ASM129741v1	26360794	BU_G0701_t5
"Salmonella enterica subsp. enterica serovar 9,12:l,v:- str. 94293"	1387330	PRJNA215425	215425	Proteobacteria	Gammaproteobacteria	4.60359	52.1	-	JGYE01	192	4741	4402	4/25/14	3/1/17	Scaffold	University of California Irvine	SAMN02691620	GCA_000648375.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/375/GCA_000648375.2_94293_Ver1	24719441	94293
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.92571	50.7	-	NLHI01	232	5325	4748	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452917	GCA_002226395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/395/GCA_002226395.1_ASM222639v1	-	MOD1-EC5704
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36691	65.6	-	FPVC01	85	4268	4079	11/23/16	3/14/17	Scaffold	SC	SAMEA2683069	GCA_900122565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/565/GCA_900122565.1_14722_8_47	-	2926STDY5723823
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.10117	39.5	-	CVII01	73	2316	2075	4/2/15	3/5/17	Scaffold	SC	SAMEA682412	GCA_001330475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/475/GCA_001330475.1_5504_3_10	-	K01_071280
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.06432	39.8	-	CIJA01	170	2219	2062	4/21/15	3/5/17	Scaffold	SC	SAMEA682420	GCA_001330495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/495/GCA_001330495.1_5366_7_9	-	09B00197
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35661	65.5	-	FPVD01	88	4260	4059	11/23/16	3/14/17	Scaffold	SC	SAMEA2683070	GCA_900122575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/575/GCA_900122575.1_14722_8_48	-	2926STDY5723824
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.4539	50.5	-	NLHJ01	359	6026	5452	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452918	GCA_002226415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/415/GCA_002226415.1_ASM222641v1	-	MOD1-EC5703
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000956	1182185	PRJNA162827	162827	Proteobacteria	Gammaproteobacteria	4.78536	52.2	-	JRLQ01	193	4866	4598	9/25/14	2/27/17	Scaffold	FDA	SAMN00991055	GCA_000757925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/925/GCA_000757925.1_CFSAN000956_01.0	-	CFSAN000956
Staphylococcus aureus	1280	PRJNA283747	283747	Terrabacteria group	Firmicutes	2.75985	32.7	-	LFNQ01	40	2843	2697	9/23/15	3/5/17	Contig	"Noguchi Memorial Institute for Medical Research, University of Ghana"	SAMN03658599	GCA_001297445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/445/GCA_001297445.1_ASM129744v1	26360794	BU_G1201_t8
Staphylococcus aureus	1280	PRJNA283747	283747	Terrabacteria group	Firmicutes	2.68839	32.7	-	LFNN01	21	2779	2632	9/23/15	3/5/17	Contig	"Noguchi Memorial Institute for Medical Research, University of Ghana"	SAMN03658596	GCA_001297455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/455/GCA_001297455.1_ASM129745v1	26360794	BU_N3_t2
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000220	1173443	PRJNA159311	159311	Proteobacteria	Gammaproteobacteria	5.14105	52.2	-	JRLS01	343	5343	5014	9/25/14	2/27/17	Scaffold	FDA	SAMN00989079	GCA_000757945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/945/GCA_000757945.1_CFSAN000220.0	-	CFSAN000220
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.96816	50.5	-	NLHP01	63	5058	4742	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452879	GCA_002226425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/425/GCA_002226425.1_ASM222642v1	-	MOD1-EC5696
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37025	65.6	-	FPVF01	89	4289	4087	11/23/16	3/14/17	Scaffold	SC	SAMEA2683071	GCA_900122585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/585/GCA_900122585.1_14722_8_49	-	2926STDY5723825
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.09192	39.8	-	CGAZ01	128	2245	2073	3/15/15	3/5/17	Scaffold	SC	SAMEA682423	GCA_001330515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/515/GCA_001330515.1_5366_3_11	-	08B04886
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.03046	39.8	-	CIEW01	123	2166	2013	4/21/15	3/5/17	Scaffold	SC	SAMEA682441	GCA_001330535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/535/GCA_001330535.1_5366_3_10	-	08B04698
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32691	65.6	-	FPVE01	76	4247	4057	11/23/16	3/14/17	Scaffold	SC	SAMEA2683019	GCA_900122595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/595/GCA_900122595.1_14722_8_5	-	2926STDY5723772
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.82266	50.9	-	NLHK01	142	5121	4690	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452919	GCA_002226455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/455/GCA_002226455.1_ASM222645v1	-	MOD1-EC5702
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000962	1182192	PRJNA162841	162841	Proteobacteria	Gammaproteobacteria	4.75689	52.2	-	JRLP01	389	4827	4565	9/25/14	2/27/17	Scaffold	FDA	SAMN01942271	GCA_000757955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/955/GCA_000757955.1_CFSAN000962_01.0	-	CFSAN000962
Staphylococcus aureus	1280	PRJNA283747	283747	Terrabacteria group	Firmicutes	2.76806	32.7	-	LFOG01	37	2862	2691	9/23/15	3/5/17	Contig	"Noguchi Memorial Institute for Medical Research, University of Ghana"	SAMN03658603	GCA_001297465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/465/GCA_001297465.1_ASM129746v1	26360794	BU_G0301_t8
Staphylococcus aureus	1280	PRJNA283747	283747	Terrabacteria group	Firmicutes	2.75073	32.7	-	LFNR01	39	2857	2684	9/23/15	3/5/17	Contig	"Noguchi Memorial Institute for Medical Research, University of Ghana"	SAMN03658600	GCA_001297475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/475/GCA_001297475.1_ASM129747v1	26360794	BU_G2601A_t9
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN001090	1196349	PRJNA167849	167849	Proteobacteria	Gammaproteobacteria	4.7792	52.2	-	JRLO01	122	4836	4602	9/25/14	2/27/17	Scaffold	US Food and Drug Administration	SAMN01057786	GCA_000758005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/758/005/GCA_000758005.1_CFSAN001090_01.0	-	CFSAN001090
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.74411	50.6	-	NLGN01	206	5064	4615	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05439303	GCA_002226465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/465/GCA_002226465.1_ASM222646v1	-	MOD1-EC5728
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36193	65.6	-	FPVG01	92	4267	4072	11/23/16	3/14/17	Scaffold	SC	SAMEA2683075	GCA_900122605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/605/GCA_900122605.1_14722_8_50	-	2926STDY5723829
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.03517	39.8	-	CVIJ01	88	2175	1994	4/2/15	3/5/17	Scaffold	SC	SAMEA682535	GCA_001330555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/555/GCA_001330555.1_5504_3_12	-	K01_01237
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.07635	39.6	-	CVIP01	99	2228	2027	4/2/15	3/5/17	Scaffold	SC	SAMEA682549	GCA_001330575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/575/GCA_001330575.1_5504_3_5	-	K01_071205
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37027	65.6	-	FPVH01	76	4284	4083	11/23/16	3/14/17	Scaffold	SC	SAMEA2683077	GCA_900122615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/615/GCA_900122615.1_14722_8_52	-	2926STDY5723831
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.41533	50.2	-	NLIP01	263	5716	5211	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440454	GCA_002226495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/495/GCA_002226495.1_ASM222649v1	-	MOD1-EC5670
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA273513	273513	Proteobacteria	Gammaproteobacteria	4.77555	52.2	-	LAPA01	58	4836	4588	4/20/15	2/27/17	Scaffold	McGill University and Genome Quebec Innovation Centre	SAMN03293347	GCA_000973745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/745/GCA_000973745.1_ABBSB1020-2.id16_v1.0	26083489	ABBSB1020-2
Staphylococcus aureus	1280	PRJNA283747	283747	Terrabacteria group	Firmicutes	2.74556	32.7	-	LFNK01	32	2838	2714	9/23/15	3/5/17	Contig	"Noguchi Memorial Institute for Medical Research, University of Ghana"	SAMN03658593	GCA_001297525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/525/GCA_001297525.1_ASM129752v1	26360794	BU_W22_t4
Staphylococcus aureus	1280	PRJNA283747	283747	Terrabacteria group	Firmicutes	2.76699	32.7	-	LFNM01	31	2908	2761	9/23/15	3/5/17	Contig	"Noguchi Memorial Institute for Medical Research, University of Ghana"	SAMN03658595	GCA_001297545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/545/GCA_001297545.1_ASM129754v1	26360794	BU_N17Y_t2
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA273513	273513	Proteobacteria	Gammaproteobacteria	4.84309	52	-	LAOZ01	76	4925	4640	4/20/15	2/27/17	Scaffold	McGill University and Genome Quebec Innovation Centre	SAMN03293356	GCA_000973755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/755/GCA_000973755.1_ABBSB1008-2.id24_v1.0	26083489	ABBSB1008-2
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.78304	50.7	-	NLHL01	104	4982	4625	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452920	GCA_002226505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/505/GCA_002226505.1_ASM222650v1	-	MOD1-EC5700
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32305	65.6	-	FPVI01	75	4243	4068	11/23/16	3/14/17	Scaffold	SC	SAMEA2683078	GCA_900122625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/625/GCA_900122625.1_14722_8_53	-	2926STDY5723832
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.10622	39.8	-	CIEV01	176	2266	2090	4/21/15	3/11/17	Scaffold	SC	SAMEA682551	GCA_001330595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/595/GCA_001330595.1_5429_8_5	-	09B09095
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.09083	39.5	-	CVIG01	72	2281	2066	4/2/15	3/11/17	Scaffold	SC	SAMEA682553	GCA_001330615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/615/GCA_001330615.1_5504_3_6	-	K01_071218
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32273	65.6	-	FPVK01	81	4249	4060	11/23/16	3/14/17	Scaffold	SC	SAMEA2683079	GCA_900122635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/635/GCA_900122635.1_14722_8_54	-	2926STDY5723833
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.12476	50.8	-	NLID01	151	5383	4978	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452893	GCA_002226535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/535/GCA_002226535.1_ASM222653v1	-	MOD1-EC5682
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA273513	273513	Proteobacteria	Gammaproteobacteria	4.6855	52.2	-	LAOV01	62	4756	4511	4/20/15	2/27/17	Scaffold	McGill University and Genome Quebec Innovation Centre	SAMN03293346	GCA_000973775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/775/GCA_000973775.1_ABB1048-1.id15_v1.0	26083489	ABB1048-1
Staphylococcus aureus	1280	PRJNA283747	283747	Terrabacteria group	Firmicutes	2.82069	32.7	-	LFTT01	24	2943	2781	9/23/15	3/5/17	Contig	"Noguchi Memorial Institute for Medical Research, University of Ghana"	SAMN03658602	GCA_001297605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/605/GCA_001297605.1_ASM129760v1	26360794	BU_W12_t13
Staphylococcus aureus	1280	PRJNA283747	283747	Terrabacteria group	Firmicutes	2.76012	32.7	-	LFTU01	33	2854	2686	9/23/15	3/5/17	Contig	"Noguchi Memorial Institute for Medical Research, University of Ghana"	SAMN03658605	GCA_001297625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/625/GCA_001297625.1_ASM129762v1	26360794	BU_G1101_t2
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA273513	273513	Proteobacteria	Gammaproteobacteria	4.75532	51.9	-	LAOS01	272	5092	4673	4/20/15	2/27/17	Scaffold	McGill University and Genome Quebec Innovation Centre	SAMN03293351	GCA_000973785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/785/GCA_000973785.1_ABB07-SB3031.id20_v1.0	26083489	ABB07-SB3031
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.71552	50.5	-	NLIG01	74	4867	4533	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452896	GCA_002226545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/545/GCA_002226545.1_ASM222654v1	-	MOD1-EC5679
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36272	65.6	-	FPVJ01	86	4288	4074	11/23/16	3/14/17	Scaffold	SC	SAMEA2683081	GCA_900122645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/645/GCA_900122645.1_14722_8_55	-	2926STDY5723835
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.16422	39.9	-	CIJG01	76	2345	2151	4/21/15	3/11/17	Scaffold	SC	SAMEA682556	GCA_001330635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/635/GCA_001330635.1_5366_6_7	-	08B08624
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.15472	39.5	-	CGBJ01	310	2338	2135	3/15/15	3/11/17	Scaffold	SC	SAMEA682559	GCA_001330655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/655/GCA_001330655.1_5392_7_2	-	spnIC210
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35626	65.6	-	FPVL01	82	4264	4077	11/23/16	3/14/17	Scaffold	SC	SAMEA2683082	GCA_900122655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/655/GCA_900122655.1_14722_8_56	-	2926STDY5723836
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.8037	50.8	-	NLIE01	68	4974	4679	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452894	GCA_002226575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/575/GCA_002226575.1_ASM222657v1	-	MOD1-EC5681
"Salmonella enterica subsp. enterica serovar 4,[5],12:i:-"	440524	PRJNA273513	273513	Proteobacteria	Gammaproteobacteria	4.94305	52.2	-	LAPG01	91	5113	4849	4/20/15	2/27/17	Scaffold	McGill University and Genome Quebec Innovation Centre	SAMN03293335	GCA_000973815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/815/GCA_000973815.1_ABBSB1205-1.id4_v1.0	26083489	ABBSB1205-1
Staphylococcus aureus	1280	PRJNA283747	283747	Terrabacteria group	Firmicutes	2.71138	32.7	-	LFTV01	34	2776	2611	9/23/15	3/5/17	Contig	"Noguchi Memorial Institute for Medical Research, University of Ghana"	SAMN03658607	GCA_001297635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/635/GCA_001297635.1_ASM129763v1	26360794	BU_N17W_t2
Staphylococcus aureus	1280	PRJNA283747	283747	Terrabacteria group	Firmicutes	2.75844	32.7	-	LFTW01	39	2841	2678	9/23/15	3/5/17	Contig	"Noguchi Memorial Institute for Medical Research, University of Ghana"	SAMN03658608	GCA_001297665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/665/GCA_001297665.1_ASM129766v1	26360794	BU_G0706B_t8
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA273513	273513	Proteobacteria	Gammaproteobacteria	4.7712	51.8	-	LAPL01	260	5031	4583	4/20/15	2/27/17	Scaffold	McGill University and Genome Quebec Innovation Centre	SAMN03293354	GCA_000973835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/835/GCA_000973835.1_SALC-205-3.id22_v1.0	26083489	SALC-205-3
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.00448	50.7	-	NLHM01	95	5205	4853	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452921	GCA_002226585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/585/GCA_002226585.1_ASM222658v1	-	MOD1-EC5699
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37556	65.6	-	FPVN01	95	4284	4088	11/23/16	3/14/17	Scaffold	SC	SAMEA2683083	GCA_900122665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/665/GCA_900122665.1_14722_8_57	-	2926STDY5723837
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.15579	39.6	-	CHJK01	240	2325	2132	4/21/15	3/11/17	Scaffold	SC	SAMEA682560	GCA_001330675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/675/GCA_001330675.1_5392_7_1	-	spnIC203
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.1682	39.6	-	CHYN01	267	2341	2143	4/21/15	3/11/17	Scaffold	SC	SAMEA682563	GCA_001330695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/695/GCA_001330695.1_5392_6_10	-	spnIC192
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32348	65.6	-	FPVM01	72	4244	4054	11/23/16	3/14/17	Scaffold	SC	SAMEA2683084	GCA_900122675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/675/GCA_900122675.1_14722_8_58	-	2926STDY5723838
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.74868	50.7	-	NLJD01	68	4901	4639	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993219	GCA_002226615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/615/GCA_002226615.1_ASM222661v1	-	MOD1-EC5656
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA273513	273513	Proteobacteria	Gammaproteobacteria	4.96147	52.2	-	LAPM01	81	5115	4863	4/20/15	2/27/17	Scaffold	McGill University and Genome Quebec Innovation Centre	SAMN03293339	GCA_000973845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/845/GCA_000973845.1_SALF-276-1.id8_v1.0	26083489	SALF-276-1
Staphylococcus aureus	1280	PRJNA283747	283747	Terrabacteria group	Firmicutes	2.76714	32.7	-	LGAE01	45	2863	2692	9/23/15	3/5/17	Contig	"Noguchi Memorial Institute for Medical Research, University of Ghana"	SAMN03658606	GCA_001297685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/685/GCA_001297685.1_ASM129768v1	26360794	BU_G1001_t8
Staphylococcus aureus	1280	PRJNA262928	262928	Terrabacteria group	Firmicutes	2.80114	32.7	-	LJOC01	134	2911	2773	10/5/15	3/5/17	Contig	University El Bosque	SAMN03092872	GCA_001306505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/505/GCA_001306505.1_ASM130650v1	26402569	HOU1445-VS
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA273513	273513	Proteobacteria	Gammaproteobacteria	5.03066	52.2	-	LAPP01	87	5248	4969	4/20/15	2/27/17	Scaffold	McGill University and Genome Quebec Innovation Centre	SAMN03293334	GCA_000973885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/885/GCA_000973885.1_SALH-394-2.id3_v1.0	26083489	SALH-394-2
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.45354	50.4	-	NLHN01	58	5638	5317	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452922	GCA_002226635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/635/GCA_002226635.1_ASM222663v1	-	MOD1-EC5698
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36199	65.6	-	FPVO01	87	4274	4077	11/23/16	3/14/17	Scaffold	SC	SAMEA2683086	GCA_900122685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/685/GCA_900122685.1_14722_8_59	-	2926STDY5723840
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.10673	39.7	-	CVIQ01	124	2264	2064	4/2/15	3/11/17	Scaffold	SC	SAMEA682567	GCA_001330715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/715/GCA_001330715.1_5504_3_7	-	K13_0820
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.10025	39.9	-	CGAS01	116	2242	2076	3/15/15	3/11/17	Scaffold	SC	SAMEA682576	GCA_001330755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/755/GCA_001330755.1_5381_3_11	-	09B08788
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32219	65.6	-	FPVP01	72	4255	4074	11/23/16	3/14/17	Scaffold	SC	SAMEA2683020	GCA_900122695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/695/GCA_900122695.1_14722_8_6	-	2926STDY5723773
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.94276	50.6	-	NLIF01	83	5148	4761	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452895	GCA_002226645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/645/GCA_002226645.1_ASM222664v1	-	MOD1-EC5680
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA273513	273513	Proteobacteria	Gammaproteobacteria	5.02359	51.9	-	LAOT01	204	5154	4844	4/20/15	2/27/17	Scaffold	McGill University and Genome Quebec Innovation Centre	SAMN03293355	GCA_000973905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/905/GCA_000973905.1_ABB07-SB3057-2.id23_v1.0	26083489	ABB07-SB3057-2
Staphylococcus aureus	1280	PRJNA294307	294307	Terrabacteria group	Firmicutes	2.8606	32.7	-	LJOB01	152	2974	2835	10/5/15	3/5/17	Contig	Universidad El Bosque	SAMN03093451	GCA_001306525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/306/525/GCA_001306525.1_ASM130652v1	26402569	HOU1444-VR
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.83232	32.7	-	CVKB01	45	2922	2781	4/2/15	3/5/17	Contig	SC	SAMEA1463305	GCA_001349375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/375/GCA_001349375.1_7907_7_17	-	BSAR180
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA273513	273513	Proteobacteria	Gammaproteobacteria	4.80586	52.1	-	LAOX01	68	4923	4686	4/20/15	2/27/17	Scaffold	McGill University and Genome Quebec Innovation Centre	SAMN03293340	GCA_000973915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/915/GCA_000973915.1_ABB1162-2.id9_v1.0	26083489	ABB1162-2
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.19614	50.4	-	NLHO01	61	5318	4956	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452878	GCA_002226655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/655/GCA_002226655.1_ASM222665v1	-	MOD1-EC5697
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36341	65.6	-	FPVQ01	71	4265	4080	11/23/16	3/14/17	Scaffold	SC	SAMEA2683087	GCA_900122705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/705/GCA_900122705.1_14722_8_60	-	2926STDY5723841
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.15745	39.6	-	CVIN01	94	2325	2135	4/2/15	3/11/17	Scaffold	SC	SAMEA682577	GCA_001330775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/775/GCA_001330775.1_5504_3_3	-	K13_0913
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.14989	39.9	-	CHJQ01	164	2294	2106	4/21/15	3/11/17	Scaffold	SC	SAMEA682582	GCA_001330815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/815/GCA_001330815.1_5429_8_8	-	09B09593
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36845	65.6	-	FPVR01	76	4271	4077	11/23/16	3/14/17	Scaffold	SC	SAMEA2683089	GCA_900122715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/715/GCA_900122715.1_14722_8_61	-	2926STDY5723843
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.62286	50.9	-	NLHU01	181	4761	4440	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452884	GCA_002226695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/695/GCA_002226695.1_ASM222669v1	-	MOD1-EC5691
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA273513	273513	Proteobacteria	Gammaproteobacteria	4.69164	52.1	-	LAOY01	41	4800	4552	4/20/15	2/27/17	Scaffold	McGill University and Genome Quebec Innovation Centre	SAMN03293342	GCA_000973935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/935/GCA_000973935.1_ABBSB1004-1.id11_v1.0	26083489	ABBSB1004-1
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.79898	32.7	-	CGHI01	39	2886	2744	3/15/15	3/5/17	Contig	SC	SAMEA1463335	GCA_001349395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/395/GCA_001349395.1_7907_7_20	-	BSAR202
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.83046	32.7	-	CGFO01	52	2921	2781	3/15/15	3/5/17	Contig	SC	SAMEA1463379	GCA_001349415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/415/GCA_001349415.1_7907_7_18	-	BSAR182
Salmonella enterica subsp. enterica serovar Thompson	600	PRJNA273513	273513	Proteobacteria	Gammaproteobacteria	4.87974	52.1	-	LAPB01	48	5001	4762	4/20/15	2/27/17	Scaffold	McGill University and Genome Quebec Innovation Centre	SAMN03293344	GCA_000973955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/955/GCA_000973955.1_ABBSB1050-2.id13_v1.0	26083489	ABBSB1050-2
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.05736	50.5	-	NLHT01	206	5258	4899	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452883	GCA_002226715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/715/GCA_002226715.1_ASM222671v1	-	MOD1-EC5692
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36463	65.5	-	FPVS01	81	4286	4092	11/23/16	3/14/17	Scaffold	SC	SAMEA2683090	GCA_900122725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/725/GCA_900122725.1_14722_8_62	-	2926STDY5723844
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.19361	39.5	-	CHJO01	78	2422	2199	4/21/15	3/11/17	Scaffold	SC	SAMEA682587	GCA_001330835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/835/GCA_001330835.1_5392_6_1	-	spnIC139
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.03658	39.8	-	CVIR01	145	2195	2005	4/2/15	3/11/17	Scaffold	SC	SAMEA682588	GCA_001330855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/855/GCA_001330855.1_5468_1_1	-	K01_01244
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36954	65.5	-	FPVT01	78	4275	4098	11/23/16	3/14/17	Scaffold	SC	SAMEA2683091	GCA_900122735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/735/GCA_900122735.1_14722_8_63	-	2926STDY5723845
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.2337	50.7	-	NLHV01	287	5498	5109	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452885	GCA_002226725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/725/GCA_002226725.1_ASM222672v1	-	MOD1-EC5690
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA273513	273513	Proteobacteria	Gammaproteobacteria	5.01846	52.2	-	LAPF01	7	5115	4860	4/20/15	2/27/17	Scaffold	McGill University and Genome Quebec Innovation Centre	SAMN03293345	GCA_000973985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/973/985/GCA_000973985.1_Senterica.svTyphimurium.strABBSB1189-1.id14_v1.0	26083489	ABBSB1189-1
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.78859	32.7	-	CFZU01	51	2852	2711	3/15/15	3/5/17	Contig	SC	SAMEA1463406	GCA_001349435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/435/GCA_001349435.1_7907_7_84	-	BSAR190_2
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.7881	32.7	-	CFXN01	44	2881	2729	3/15/15	3/5/17	Contig	SC	SAMEA1463418	GCA_001349455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/455/GCA_001349455.1_7893_8_7	-	BSAR213
"Salmonella enterica subsp. enterica serovar 4,[5],12:i:-"	440524	PRJNA273513	273513	Proteobacteria	Gammaproteobacteria	4.95212	52.2	-	LAPH01	88	5128	4857	4/20/15	2/27/17	Scaffold	McGill University and Genome Quebec Innovation Centre	SAMN03293338	GCA_000974005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/005/GCA_000974005.1_ABBSB1218-1.id7_v1.0	26083489	ABBSB1218-1
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.18708	50.7	-	NLIH01	97	5496	5139	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452860	GCA_002226735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/735/GCA_002226735.1_ASM222673v1	-	MOD1-EC5678
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35371	65.6	-	FPVV01	91	4279	4053	11/23/16	3/14/17	Scaffold	SC	SAMEA2683092	GCA_900122745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/745/GCA_900122745.1_14722_8_64	-	2926STDY5723846
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.14443	39.5	-	CIFF01	76	2357	2153	4/21/15	3/11/17	Scaffold	SC	SAMEA682589	GCA_001330875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/875/GCA_001330875.1_5392_6_4	-	spnIC161
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.03286	40.1	-	CGBE01	316	2222	1990	3/15/15	3/11/17	Scaffold	SC	SAMEA682600	GCA_001330895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/895/GCA_001330895.1_5381_2_11	-	09B06006
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3652	65.6	-	FPVU01	78	4270	4074	11/23/16	3/14/17	Scaffold	SC	SAMEA2683093	GCA_900122755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/755/GCA_900122755.1_14722_8_65	-	2926STDY5723847
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.35545	50.5	-	NLHW01	154	5623	5195	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452886	GCA_002226775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/775/GCA_002226775.1_ASM222677v1	-	MOD1-EC5689
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA273513	273513	Proteobacteria	Gammaproteobacteria	4.83248	52.2	-	LAPN01	101	4989	4725	4/20/15	2/27/17	Scaffold	McGill University and Genome Quebec Innovation Centre	SAMN03293336	GCA_000974015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/015/GCA_000974015.1_SALF-297-2.id5_v1.0	26083489	SALF-297-2
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.78233	32.7	-	CFYH01	38	2870	2721	3/15/15	3/5/17	Contig	SC	SAMEA1463419	GCA_001349475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/475/GCA_001349475.1_7907_7_82	-	BSAR188_2
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.75055	32.7	-	CGGA01	39	2822	2682	3/15/15	3/5/17	Contig	SC	SAMEA1463420	GCA_001349495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/495/GCA_001349495.1_7907_7_68	-	BSAR171_2
"Salmonella enterica subsp. enterica serovar 4,[5],12:i:-"	440524	PRJNA273513	273513	Proteobacteria	Gammaproteobacteria	4.85904	52.2	-	LAPQ01	70	4990	4749	4/20/15	2/27/17	Scaffold	McGill University and Genome Quebec Innovation Centre	SAMN03293337	GCA_000974035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/035/GCA_000974035.1_SALI-436-3.id6_v1.0	26083489	SALI-436-3
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.12608	50.8	-	NLIC01	155	5408	4988	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452892	GCA_002226785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/785/GCA_002226785.1_ASM222678v1	-	MOD1-EC5683
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36742	65.6	-	FPVW01	86	4278	4075	11/23/16	3/14/17	Scaffold	SC	SAMEA2683094	GCA_900122765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/765/GCA_900122765.1_14722_8_66	-	2926STDY5723848
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.06411	39.9	-	CHDB01	127	2227	2048	4/21/15	3/11/17	Scaffold	SC	SAMEA682607	GCA_001330915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/915/GCA_001330915.1_5381_3_10	-	09B08647
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.02213	39.7	-	CVIE01	69	2199	1996	4/2/15	3/11/17	Scaffold	SC	SAMEA682609	GCA_001330955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/330/955/GCA_001330955.1_5477_6_10	-	V01_01107
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3617	65.6	-	FPVX01	86	4270	4073	11/23/16	3/14/17	Scaffold	SC	SAMEA2683095	GCA_900122775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/775/GCA_900122775.1_14722_8_67	-	2926STDY5723849
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.01782	50.7	-	NLHX01	146	5307	4907	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452887	GCA_002226815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/815/GCA_002226815.1_ASM222681v1	-	MOD1-EC5688
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA273513	273513	Proteobacteria	Gammaproteobacteria	4.70134	52.1	-	LAOU01	34	4808	4556	4/20/15	2/27/17	Scaffold	McGill University and Genome Quebec Innovation Centre	SAMN03293343	GCA_000974045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/045/GCA_000974045.1_ABB07-SB3071.id12_v1.0	26083489	ABB07-SB3071
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.80227	32.7	-	CFWP01	34	2896	2744	3/15/15	3/5/17	Contig	SC	SAMEA1463424	GCA_001349515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/515/GCA_001349515.1_7907_7_95	-	BSAR204_2
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.79811	32.7	-	CFWX01	39	2886	2750	3/15/15	3/5/17	Contig	SC	SAMEA1463433	GCA_001349535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/535/GCA_001349535.1_7907_7_70	-	BSAR173_2
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA273513	273513	Proteobacteria	Gammaproteobacteria	4.82926	51.8	-	LAOW01	252	5065	4641	4/20/15	2/27/17	Scaffold	McGill University and Genome Quebec Innovation Centre	SAMN03293353	GCA_000974085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/085/GCA_000974085.1_ABB1087-1.id21_v1.0	26083489	ABB1087-1
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.69388	50.7	-	NLHY01	104	4985	4575	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452888	GCA_002226825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/825/GCA_002226825.1_ASM222682v1	-	MOD1-EC5687
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36692	65.6	-	FPVY01	88	4276	4092	11/23/16	3/14/17	Scaffold	SC	SAMEA2683096	GCA_900122785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/785/GCA_900122785.1_14722_8_68	-	2926STDY5723850
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.04314	39.6	-	CHAS01	126	2172	1960	4/21/15	3/11/17	Scaffold	SC	SAMEA1022768	GCA_001333975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/975/GCA_001333975.1_5919_1_12	-	140
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.14651	39.7	-	CHAU01	76	2324	2001	4/21/15	3/11/17	Scaffold	SC	SAMEA1022778	GCA_001333995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/333/995/GCA_001333995.1_6406_5_5	-	408
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35569	65.6	-	FPVZ01	92	4280	4065	11/23/16	3/14/17	Scaffold	SC	SAMEA2683021	GCA_900122795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/795/GCA_900122795.1_14722_8_7	-	2926STDY5723774
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.65215	50.6	-	NLHZ01	78	4822	4501	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452889	GCA_002226855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/855/GCA_002226855.1_ASM222685v1	-	MOD1-EC5686
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA273513	273513	Proteobacteria	Gammaproteobacteria	4.80655	52.1	-	LAPC01	67	4901	4677	4/20/15	2/27/17	Scaffold	McGill University and Genome Quebec Innovation Centre	SAMN03293332	GCA_000974095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/095/GCA_000974095.1_ABBSB1113-1.id1_v1.0	26083489	ABBSB1113-1
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.83784	32.7	-	CFZM01	46	2933	2790	3/15/15	3/5/17	Contig	SC	SAMEA1463437	GCA_001349555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/555/GCA_001349555.1_7907_7_80	-	BSAR186_2
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.79998	32.7	-	CFZJ01	40	2893	2749	3/15/15	3/5/17	Contig	SC	SAMEA1463445	GCA_001349575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/575/GCA_001349575.1_7907_7_81	-	BSAR187_2
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA273513	273513	Proteobacteria	Gammaproteobacteria	4.80384	52.1	-	LAPD01	65	4913	4683	4/20/15	2/27/17	Scaffold	McGill University and Genome Quebec Innovation Centre	SAMN03293341	GCA_000974125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/125/GCA_000974125.1_ABBSB1116-2.id10_v1.0	26083489	ABBSB1116-2
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.8288	50.6	-	NLIA01	70	5003	4666	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452890	GCA_002226865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/865/GCA_002226865.1_ASM222686v1	-	MOD1-EC5685
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35702	65.6	-	FPWB01	82	4275	4086	11/23/16	3/14/17	Scaffold	SC	SAMEA2683099	GCA_900122805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/805/GCA_900122805.1_14722_8_70	-	2926STDY5723853
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.15952	39.7	-	CHAR01	126	2349	2020	4/21/15	3/11/17	Scaffold	SC	SAMEA1022787	GCA_001334055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/055/GCA_001334055.1_6406_5_4	-	407
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.01601	39.8	-	CVHP01	176	2150	1927	4/2/15	3/11/17	Scaffold	SC	SAMEA1022802	GCA_001334075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/075/GCA_001334075.1_5756_7_10	-	338
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36947	65.6	-	FPWA01	89	4274	4079	11/23/16	3/14/17	Scaffold	SC	SAMEA2683100	GCA_900122815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/815/GCA_900122815.1_14722_8_71	-	2926STDY5723854
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.12913	50.8	-	NLIB01	160	5406	4995	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452891	GCA_002226895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/895/GCA_002226895.1_ASM222689v1	-	MOD1-EC5684
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA273513	273513	Proteobacteria	Gammaproteobacteria	4.66927	52.2	-	LAPE01	42	4709	4475	4/20/15	2/27/17	Scaffold	McGill University and Genome Quebec Innovation Centre	SAMN03293348	GCA_000974135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/135/GCA_000974135.1_ABBSB1121-1.id17_v1.0	26083489	ABBSB1121-1
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.79085	32.7	-	CIBD01	41	2859	2714	4/21/15	3/5/17	Contig	SC	SAMEA1463448	GCA_001349595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/595/GCA_001349595.1_7907_7_71	-	BSAR174_2
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.8355	32.7	-	CHFM01	58	2935	2784	4/21/15	3/5/17	Contig	SC	SAMEA1463451	GCA_001349615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/615/GCA_001349615.1_7907_7_63	-	BSAR166_2
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA273513	273513	Proteobacteria	Gammaproteobacteria	4.80293	52.1	-	LAPI01	49	4906	4657	4/20/15	2/27/17	Scaffold	McGill University and Genome Quebec Innovation Centre	SAMN03293350	GCA_000974165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/165/GCA_000974165.1_SALB-159-4.id19_v1.0	26083489	SALB-159-4
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.87924	50.3	-	NLII01	187	5170	4794	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440447	GCA_002226905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/905/GCA_002226905.1_ASM222690v1	-	MOD1-EC5677
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3641	65.6	-	FPWC01	70	4255	4072	11/23/16	3/14/17	Scaffold	SC	SAMEA2683101	GCA_900122825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/825/GCA_900122825.1_14722_8_72	-	2926STDY5723855
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.10766	39.8	-	CFSD01	111	2233	1955	3/15/15	3/11/17	Scaffold	SC	SAMEA1022804	GCA_001334095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/095/GCA_001334095.1_5737_7_12	-	178
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.09515	39.9	-	CHAQ01	110	2208	1961	4/21/15	3/11/17	Scaffold	SC	SAMEA1022875	GCA_001334115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/115/GCA_001334115.1_5737_6_7	-	148
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36778	65.6	-	FPWD01	76	4284	4082	11/23/16	3/14/17	Scaffold	SC	SAMEA2683102	GCA_900122835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/835/GCA_900122835.1_14722_8_73	-	2926STDY5723856
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.85581	50.7	-	NLIJ01	191	5028	4658	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440448	GCA_002226935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/935/GCA_002226935.1_ASM222693v1	-	MOD1-EC5676
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA273513	273513	Proteobacteria	Gammaproteobacteria	4.80213	52.1	-	LAPJ01	54	4905	4662	4/20/15	2/27/17	Scaffold	McGill University and Genome Quebec Innovation Centre	SAMN03293349	GCA_000974175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/175/GCA_000974175.1_SALB-46.id18_v1.0	26083489	SALB-46
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.78953	32.7	-	CGHX01	40	2880	2732	3/15/15	3/5/17	Contig	SC	SAMEA1463454	GCA_001349635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/635/GCA_001349635.1_7907_7_92	-	BSAR199_2
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.78285	32.7	-	CFZN01	52	2868	2726	3/15/15	3/5/17	Contig	SC	SAMEA1463455	GCA_001349655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/655/GCA_001349655.1_7907_7_79	-	BSAR185_2
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA273513	273513	Proteobacteria	Gammaproteobacteria	4.78719	52.1	-	LAPK01	61	4882	4634	4/20/15	2/27/17	Scaffold	McGill University and Genome Quebec Innovation Centre	SAMN03293352	GCA_000974205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/205/GCA_000974205.1_SALB-47-2.id25_v1.0	26083489	SALB-47-2
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.89602	50.7	-	NLIS01	170	5140	4772	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440457	GCA_002226945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/945/GCA_002226945.1_ASM222694v1	-	MOD1-EC5667
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36578	65.6	-	FPWE01	71	4274	4086	11/23/16	3/14/17	Scaffold	SC	SAMEA2683103	GCA_900122845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/845/GCA_900122845.1_14722_8_74	-	2926STDY5723857
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.10142	39.8	-	CFIG01	188	2214	1970	3/15/15	3/11/17	Scaffold	SC	SAMEA1022885	GCA_001334135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/135/GCA_001334135.1_5737_7_4	-	161
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.12821	39.7	-	CHWI01	92	2280	2028	4/21/15	3/11/17	Scaffold	SC	SAMEA1022900	GCA_001334175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/175/GCA_001334175.1_5750_2_8	-	252
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36291	65.6	-	FPWF01	75	4267	4078	11/23/16	3/14/17	Scaffold	SC	SAMEA2683104	GCA_900122855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/855/GCA_900122855.1_14722_8_75	-	2926STDY5723858
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.81565	50.5	-	NLIU01	113	4978	4689	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440459	GCA_002226975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/975/GCA_002226975.1_ASM222697v1	-	MOD1-EC5665
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA273513	273513	Proteobacteria	Gammaproteobacteria	4.84969	52.2	-	LAPO01	90	4996	4736	4/20/15	2/27/17	Scaffold	McGill University and Genome Quebec Innovation Centre	SAMN03293333	GCA_000974215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/215/GCA_000974215.1_SALF-297-3.id2_v1.0	26083489	SALF-297-3
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.82937	32.7	-	CFNQ01	44	2925	2786	3/15/15	3/5/17	Contig	SC	SAMEA1463456	GCA_001349675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/675/GCA_001349675.1_7907_7_64	-	BSAR167_2
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.80291	32.7	-	CFXF01	33	2914	2745	3/15/15	3/5/17	Contig	SC	SAMEA1463459	GCA_001349695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/695/GCA_001349695.1_7907_7_93	-	BSAR200_2
Salmonella enterica subsp. enterica	59201	PRJNA243331	243331	Proteobacteria	Gammaproteobacteria	4.73659	52.1	-	LARZ01	170	4812	4575	4/21/15	2/27/17	Scaffold	FDA/CFSAN	SAMN02848473	GCA_000974975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/974/975/GCA_000974975.1_CFSAN003382_01.0	-	CFSAN003382
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.11503	50.6	-	NLIR01	123	5165	4837	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440456	GCA_002226985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/226/985/GCA_002226985.1_ASM222698v1	-	MOD1-EC5668
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37015	65.6	-	FPWG01	67	4274	4084	11/23/16	3/14/17	Scaffold	SC	SAMEA2683105	GCA_900122865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/865/GCA_900122865.1_14722_8_76	-	2926STDY5723859
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.10137	39.6	-	CFJF01	58	2296	2030	3/15/15	3/11/17	Scaffold	SC	SAMEA1022915	GCA_001334195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/195/GCA_001334195.1_6930_7_14	-	170
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.14233	39.7	-	CFJA01	85	2313	2022	3/15/15	3/11/17	Scaffold	SC	SAMEA1022942	GCA_001334255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/255/GCA_001334255.1_5756_6_7	-	303
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35617	65.6	-	FPWH01	88	4262	4076	11/23/16	3/14/17	Scaffold	SC	SAMEA2683106	GCA_900122875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/875/GCA_900122875.1_14722_8_77	-	2926STDY5723860
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.06881	50.6	-	NLIQ01	179	5248	4847	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440455	GCA_002227015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/015/GCA_002227015.1_ASM222701v1	-	MOD1-EC5669
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.78224	52.1	-	CHFY01	70	4996	4609	4/21/15	2/27/17	Scaffold	SC	SAMEA2153366	GCA_000982755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/982/755/GCA_000982755.1_10492_1_10	-	MDUST139
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.74413	32.7	-	CHLD01	43	2806	2678	4/21/15	3/5/17	Contig	SC	SAMEA1463465	GCA_001349715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/715/GCA_001349715.1_7907_7_67	-	BSAR170_2
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.82683	32.7	-	CVKE01	52	2924	2779	4/2/15	3/5/17	Contig	SC	SAMEA1463483	GCA_001349735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/735/GCA_001349735.1_7907_7_89	-	BSAR195_2
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5549	282192	Proteobacteria	Gammaproteobacteria	4.49356	52.2	-	CCTC01	2	4553	4200	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2646094	GCA_000983135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/135/GCA_000983135.1_PA005	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.03404	50.7	-	NLIK01	111	5171	4872	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440449	GCA_002227025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/025/GCA_002227025.1_ASM222702v1	-	MOD1-EC5675
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35744	65.5	-	FPWJ01	88	4275	4066	11/23/16	3/14/17	Scaffold	SC	SAMEA2683108	GCA_900122885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/885/GCA_900122885.1_14722_8_78	-	2926STDY5723862
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.16079	39.6	-	CIHL01	83	2351	2089	4/21/15	3/14/17	Scaffold	SC	SAMEA1023660	GCA_001334315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/315/GCA_001334315.1_6641_6_4	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.13313	39.6	-	CHNO01	70	2299	2040	4/21/15	3/11/17	Scaffold	SC	SAMEA1023661	GCA_001334335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/335/GCA_001334335.1_6631_2_12	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36951	65.6	-	FPWI01	73	4258	4076	11/23/16	3/14/17	Scaffold	SC	SAMEA2683110	GCA_900122895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/895/GCA_900122895.1_14722_8_79	-	2926STDY5723864
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.03318	50.7	-	NLIL01	98	5171	4878	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440450	GCA_002227035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/035/GCA_002227035.1_ASM222703v1	-	MOD1-EC5674
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5637	282279	Proteobacteria	Gammaproteobacteria	4.48885	52.2	-	CCTP01	3	4528	4160	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639030	GCA_000983155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/155/GCA_000983155.1_PA094	-	-
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.8329	32.7	-	CFWY01	43	2928	2788	3/15/15	3/5/17	Contig	SC	SAMEA1463484	GCA_001349755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/755/GCA_001349755.1_7907_7_90	-	BSAR196_2
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.86108	32.7	-	CFYZ01	57	2997	2837	3/15/15	3/5/17	Contig	SC	SAMEA1708659	GCA_001349775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/775/GCA_001349775.1_8987_2_66	-	BSAR707
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5659	282300	Proteobacteria	Gammaproteobacteria	4.45194	52.2	-	CCLD01	3	4488	4135	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2637236	GCA_000983175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/175/GCA_000983175.1_PA115	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.12291	50.4	-	NLIT01	200	5469	5086	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440458	GCA_002227065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/065/GCA_002227065.1_ASM222706v1	-	MOD1-EC5666
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32448	65.6	-	FPWK01	77	4248	4065	11/23/16	3/14/17	Scaffold	SC	SAMEA2683023	GCA_900122905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/905/GCA_900122905.1_14722_8_8	-	2926STDY5723776
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.02978	39.7	-	CHPD01	31	2237	2026	4/21/15	3/11/17	Scaffold	SC	SAMEA1023662	GCA_001334355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/355/GCA_001334355.1_6664_1_24	-	32A
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10018	39.6	-	CGVX01	85	2338	2080	4/21/15	3/11/17	Scaffold	SC	SAMEA1023671	GCA_001334375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/375/GCA_001334375.1_6630_4_3	-	33B
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36242	65.6	-	FPWL01	73	4273	4076	11/23/16	3/14/17	Scaffold	SC	SAMEA2683111	GCA_900122915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/915/GCA_900122915.1_14722_8_80	-	2926STDY5723865
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.32715	50.3	-	NLIO01	231	5571	5109	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440453	GCA_002227095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/095/GCA_002227095.1_ASM222709v1	-	MOD1-EC5671
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5621	282264	Proteobacteria	Gammaproteobacteria	4.58078	52.2	-	CCTT01	2	4654	4293	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639573	GCA_000983195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/195/GCA_000983195.1_PA079	-	-
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.80532	32.7	-	CFYB01	62	2909	2747	3/15/15	3/5/17	Contig	SC	SAMEA1708665	GCA_001349795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/795/GCA_001349795.1_8987_2_67	-	BSAR719
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.787	32.7	-	CGHQ01	44	2881	2747	3/15/15	3/5/17	Contig	SC	SAMEA1708667	GCA_001349815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/815/GCA_001349815.1_9061_8_78	-	BSAR860
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5569	282212	Proteobacteria	Gammaproteobacteria	4.56883	52.2	-	CCVA01	2	4642	4277	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2646062	GCA_000983215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/215/GCA_000983215.1_04_9176	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.26217	50.3	-	NLIN01	253	5536	5103	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440452	GCA_002227105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/105/GCA_002227105.1_ASM222710v1	-	MOD1-EC5672
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3658	65.6	-	FPWN01	84	4286	4084	11/23/16	3/14/17	Scaffold	SC	SAMEA2683112	GCA_900122925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/925/GCA_900122925.1_14722_8_81	-	2926STDY5723866
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09171	39.6	-	CFHD01	46	2309	2082	3/15/15	3/11/17	Scaffold	SC	SAMEA1023676	GCA_001334395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/395/GCA_001334395.1_6673_8_1	-	SMRU241
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11299	39.7	-	CIHF01	67	2265	1986	4/21/15	3/11/17	Scaffold	SC	SAMEA1023685	GCA_001334435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/435/GCA_001334435.1_6641_6_17	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3672	65.6	-	FPWM01	83	4284	4074	11/23/16	3/14/17	Scaffold	SC	SAMEA2683114	GCA_900122935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/935/GCA_900122935.1_14722_8_83	-	2926STDY5723868
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.90101	50.4	-	NLIM01	156	5208	4834	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440451	GCA_002227115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/115/GCA_002227115.1_ASM222711v1	-	MOD1-EC5673
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5579	282222	Proteobacteria	Gammaproteobacteria	4.57821	52.2	-	CCUS01	1	4648	4286	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639712	GCA_000983235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/235/GCA_000983235.1_PA035	-	-
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.84119	32.7	-	CFWU01	68	2958	2816	3/15/15	3/5/17	Contig	SC	SAMEA1708727	GCA_001349835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/835/GCA_001349835.1_8987_2_85	-	BSAR745
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.81613	32.7	-	CGFG01	60	2924	2771	3/15/15	3/5/17	Contig	SC	SAMEA1708835	GCA_001349855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/855/GCA_001349855.1_9061_8_82	-	BSAR864
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5568	282211	Proteobacteria	Gammaproteobacteria	4.58005	52.2	-	CCNZ01	1	4638	4277	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2646063	GCA_000983255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/255/GCA_000983255.1_PA024	25092320	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.04773	50.5	-	NLIV01	132	5216	4873	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440460	GCA_002227125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/125/GCA_002227125.1_ASM222712v1	-	MOD1-EC5664
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3613	65.6	-	FPWP01	82	4276	4085	11/23/16	3/14/17	Scaffold	SC	SAMEA2683119	GCA_900122945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/945/GCA_900122945.1_14722_8_84	-	2926STDY5723873
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.1274	39.6	-	CFER01	92	2356	2086	3/15/15	3/11/17	Scaffold	SC	SAMEA1023688	GCA_001334455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/455/GCA_001334455.1_6593_4_3	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10774	39.7	-	CVKQ01	161	2316	2105	4/2/15	3/11/17	Scaffold	SC	SAMEA1023691	GCA_001334475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/475/GCA_001334475.1_6714_8_1	-	11A
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36909	65.6	-	FPWO01	81	4279	4073	11/23/16	3/14/17	Scaffold	SC	SAMEA2683120	GCA_900122955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/955/GCA_900122955.1_14722_8_85	-	2926STDY5723874
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.93337	50.5	-	NLJE01	87	5134	4801	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993218	GCA_002227175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/175/GCA_002227175.1_ASM222717v1	-	MOD1-EC5655
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5554	282197	Proteobacteria	Gammaproteobacteria	4.59198	52.2	-	CCVV01	2	4689	4323	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2646077	GCA_000983275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/275/GCA_000983275.1_PA010	-	-
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.77208	32.7	-	CFYK01	45	2861	2724	3/15/15	3/5/17	Contig	SC	SAMEA1708867	GCA_001349895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/895/GCA_001349895.1_8987_2_50	-	BSAR705
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.79942	32.7	-	CGHN01	59	2901	2748	3/15/15	3/5/17	Contig	SC	SAMEA1708917	GCA_001349915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/915/GCA_001349915.1_9061_8_92	-	BSAR874
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5582	282225	Proteobacteria	Gammaproteobacteria	4.57892	52.2	-	CCLR01	2	4653	4278	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639690	GCA_000983295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/295/GCA_000983295.1_PA038	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.7777	50.5	-	NLIX01	364	6369	5648	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452861	GCA_002227195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/195/GCA_002227195.1_ASM222719v1	-	MOD1-EC5662
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3803	65.6	-	FPWQ01	74	4284	4102	11/23/16	3/14/17	Scaffold	SC	SAMEA2683122	GCA_900122965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/965/GCA_900122965.1_14722_8_86	-	2926STDY5723876
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.16927	39.5	-	CHNQ01	125	2406	2159	4/21/15	3/11/17	Scaffold	SC	SAMEA1023692	GCA_001334495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/495/GCA_001334495.1_6630_2_14	-	33D
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.03708	39.6	-	CHPI01	41	2246	2027	4/21/15	3/11/17	Scaffold	SC	SAMEA1023698	GCA_001334515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/515/GCA_001334515.1_6680_8_8	-	SMRU200
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.34583	65.5	-	FPWR01	84	4281	4080	11/23/16	3/14/17	Scaffold	SC	SAMEA2683125	GCA_900122975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/975/GCA_900122975.1_14722_8_87	-	2926STDY5723879
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.05493	50.5	-	NLIW01	167	5328	4958	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440461	GCA_002227215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/215/GCA_002227215.1_ASM222721v1	-	MOD1-EC5663
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5643	282285	Proteobacteria	Gammaproteobacteria	4.55452	52.2	-	CGIE01	6	4638	4286	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2638534	GCA_000983315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/315/GCA_000983315.1_PA100	-	-
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.7945	32.7	-	CIJV01	61	2879	2744	4/21/15	3/5/17	Contig	SC	SAMEA1708948	GCA_001349935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/935/GCA_001349935.1_8987_2_74	-	BSAR708
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.84364	32.7	-	CFZE01	53	2964	2818	3/15/15	3/5/17	Contig	SC	SAMEA1708968	GCA_001349955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/955/GCA_001349955.1_8987_2_90	-	BSAR710
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5593	282236	Proteobacteria	Gammaproteobacteria	4.55873	52.2	-	CCNY01	4	4624	4262	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639640	GCA_000983335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/335/GCA_000983335.1_PA049	25092320	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.75266	50.7	-	NLJC01	69	4906	4620	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05451387	GCA_002227225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/225/GCA_002227225.1_ASM222722v1	-	MOD1-EC5657
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3666	65.6	-	FPWU01	87	4272	4086	11/23/16	3/14/17	Scaffold	SC	SAMEA2683129	GCA_900122985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/985/GCA_900122985.1_14722_8_88	-	2926STDY5723883
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.13509	39.6	-	CHOR01	64	2378	2135	4/21/15	3/11/17	Scaffold	SC	SAMEA1023699	GCA_001334535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/535/GCA_001334535.1_6631_7_22	-	23A
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.0181	39.7	-	CHOL01	86	2230	1980	4/21/15	3/14/17	Scaffold	SC	SAMEA1023707	GCA_001334575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/575/GCA_001334575.1_6641_6_1	-	32A
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36773	65.6	-	FPWS01	78	4285	4082	11/23/16	3/14/17	Scaffold	SC	SAMEA2683130	GCA_900122995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/122/995/GCA_900122995.1_14722_8_89	-	2926STDY5723884
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.87155	50.6	-	NLJS01	99	5156	4765	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993230	GCA_002227255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/255/GCA_002227255.1_ASM222725v1	-	MOD1-EC5639
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5571	282214	Proteobacteria	Gammaproteobacteria	4.58308	52.2	-	CCUY01	6	4677	4334	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2646059	GCA_000983355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/355/GCA_000983355.1_PA027	-	-
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.76879	32.7	-	CHKW01	58	2855	2713	4/21/15	3/5/17	Contig	SC	SAMEA1708973	GCA_001349975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/975/GCA_001349975.1_8987_2_45	-	BSAR740
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.85148	32.7	-	CFZA01	58	2980	2823	3/15/15	3/5/17	Contig	SC	SAMEA1709014	GCA_001349995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/995/GCA_001349995.1_8987_2_28	-	BSAR726
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5603	282246	Proteobacteria	Gammaproteobacteria	4.58602	52.2	-	CCLN01	2	4661	4289	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639630	GCA_000983375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/375/GCA_000983375.1_PA060	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.77569	50.7	-	NLIY01	119	4940	4654	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452862	GCA_002227275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/275/GCA_002227275.1_ASM222727v1	-	MOD1-EC5661
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35342	65.6	-	FPWT01	78	4261	4070	11/23/16	3/14/17	Scaffold	SC	SAMEA2683027	GCA_900123005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/005/GCA_900123005.1_14722_8_9	-	2926STDY5723780
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.16867	39.6	-	CHQD01	138	2336	2104	4/21/15	3/11/17	Scaffold	SC	SAMEA1023709	GCA_001334595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/595/GCA_001334595.1_6714_8_19	-	SMRU571
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04357	39.7	-	CHPQ01	26	2262	2025	4/21/15	3/11/17	Scaffold	SC	SAMEA1023711	GCA_001334615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/615/GCA_001334615.1_6680_8_9	-	SMRU201
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37065	65.6	-	FPWV01	69	4264	4088	11/23/16	3/14/17	Scaffold	SC	SAMEA2683141	GCA_900123015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/015/GCA_900123015.1_14722_8_93	-	2926STDY5723895
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.08918	50.7	-	NLJA01	193	5386	4955	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452863	GCA_002227295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/295/GCA_002227295.1_ASM222729v1	-	MOD1-EC5659
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5636	282278	Proteobacteria	Gammaproteobacteria	4.6087	52.2	-	CCTO01	3	4691	4327	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639069	GCA_000983395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/395/GCA_000983395.1_PA093	-	-
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.78333	32.7	-	CIBA01	32	2874	2705	4/21/15	3/5/17	Contig	SC	SAMEA1904138	GCA_001350015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/015/GCA_001350015.1_9472_2_34	-	BSAR1006
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.86117	32.7	-	CVHZ01	17	3042	2888	4/2/15	3/5/17	Contig	SC	SAMEA1569566	GCA_001350915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/915/GCA_001350915.1_8489_7_10	-	UK13136
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5606	282249	Proteobacteria	Gammaproteobacteria	4.53326	52.2	-	CCUE01	2	4597	4234	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639627	GCA_000983415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/415/GCA_000983415.1_PA064	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.14852	50.6	-	NLJR01	150	5481	5067	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993200	GCA_002227305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/305/GCA_002227305.1_ASM222730v1	-	MOD1-EC5641
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37158	65.6	-	FPWW01	84	4279	4081	11/23/16	3/14/17	Scaffold	SC	SAMEA2683139	GCA_900123025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/025/GCA_900123025.1_14722_8_91	-	2926STDY5723893
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07925	39.6	-	CHPW01	167	2232	2015	4/21/15	3/11/17	Scaffold	SC	SAMEA1023714	GCA_001334635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/635/GCA_001334635.1_6714_8_17	-	SMRU569
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.00861	39.6	-	CGVW01	50	2210	2016	4/21/15	3/5/17	Scaffold	SC	SAMEA1023717	GCA_001334655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/655/GCA_001334655.1_6631_2_13	-	35F
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37077	65.6	-	FPWX01	79	4284	4086	11/23/16	3/14/17	Scaffold	SC	SAMEA2682774	GCA_900123035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/035/GCA_900123035.1_14892_2_1	-	2926STDY5723525
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.00891	50.6	-	NLJU01	165	5355	4886	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993194	GCA_002227315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/315/GCA_002227315.1_ASM222731v1	-	MOD1-EC5637
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5688	282329	Proteobacteria	Gammaproteobacteria	4.58142	52.2	-	CCSP01	2	4655	4289	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633618	GCA_000983435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/435/GCA_000983435.1_PA146	-	-
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.86136	32.7	-	CVHJ01	23	3005	2884	4/2/15	3/5/17	Contig	SC	SAMEA1569568	GCA_001350935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/935/GCA_001350935.1_8489_7_18	-	UK13136
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.8763	32.7	-	CVHI01	22	3040	2912	4/2/15	3/5/17	Contig	SC	SAMEA1569570	GCA_001350955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/955/GCA_001350955.1_8489_7_19	-	UKST63/485
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5567	282210	Proteobacteria	Gammaproteobacteria	4.58	52.2	-	CCLS01	1	4661	4296	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2646064	GCA_000983485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/485/GCA_000983485.1_PA023	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.34663	50.6	-	NLKC01	245	5798	5195	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993197	GCA_002227355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/355/GCA_002227355.1_ASM222735v1	-	MOD1-EC5629
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35535	65.5	-	FPXC01	92	4288	4090	11/23/16	3/14/17	Scaffold	SC	SAMEA2683142	GCA_900123045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/045/GCA_900123045.1_14722_8_94	-	2926STDY5723896
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11196	39.6	-	CIHA01	48	2289	2070	4/21/15	3/5/17	Scaffold	SC	SAMEA1023733	GCA_001334675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/675/GCA_001334675.1_6631_2_7	-	6B
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07607	39.6	-	CIGW01	68	2258	2005	4/21/15	3/6/17	Scaffold	SC	SAMEA1023736	GCA_001334695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/695/GCA_001334695.1_6593_5_12	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36307	65.6	-	FPWY01	63	4281	4092	11/23/16	3/14/17	Scaffold	SC	SAMEA2682792	GCA_900123055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/055/GCA_900123055.1_14892_2_10	-	2926STDY5723543
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.8756	50.4	-	NLIZ01	142	5174	4696	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05451386	GCA_002227365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/365/GCA_002227365.1_ASM222736v1	-	MOD1-EC5660
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5689	282330	Proteobacteria	Gammaproteobacteria	4.51158	52.2	-	CCSN01	2	4581	4214	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633617	GCA_000983505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/505/GCA_000983505.1_PA147	-	-
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.87289	32.7	-	CVGZ01	26	3046	2913	4/2/15	3/5/17	Contig	SC	SAMEA1569572	GCA_001350975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/975/GCA_001350975.1_8489_7_28	-	UKST63/485
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.86021	32.7	-	CVHA01	15	3040	2886	4/2/15	3/5/17	Contig	SC	SAMEA1569577	GCA_001350995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/995/GCA_001350995.1_8489_7_11	-	UK13136
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5601	282244	Proteobacteria	Gammaproteobacteria	4.57432	52.2	-	CCVL01	1	4645	4282	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639632	GCA_000983535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/535/GCA_000983535.1_PA057	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.00839	50.5	-	NLJT01	143	5295	4882	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993195	GCA_002227375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/375/GCA_002227375.1_ASM222737v1	-	MOD1-EC5638
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36019	65.5	-	FPXB01	84	4296	4068	11/23/16	3/14/17	Scaffold	SC	SAMEA2682800	GCA_900123065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/065/GCA_900123065.1_14892_2_12	-	2926STDY5723551
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.02017	39.7	-	CHGO01	57	2215	1940	4/21/15	3/15/17	Scaffold	SC	SAMEA1023744	GCA_001334735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/735/GCA_001334735.1_6593_5_23	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.12014	39.8	-	CIHM01	88	2338	2104	4/21/15	3/5/17	Scaffold	SC	SAMEA1023752	GCA_001334755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/755/GCA_001334755.1_6630_4_17	-	34
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37701	65.6	-	FPXA01	84	4292	4093	11/23/16	3/14/17	Scaffold	SC	SAMEA2682793	GCA_900123075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/075/GCA_900123075.1_14892_2_11	-	2926STDY5723544
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.09897	50.7	-	NLJY01	249	5431	4989	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993206	GCA_002227405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/405/GCA_002227405.1_ASM222740v1	-	MOD1-EC5633
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5605	282248	Proteobacteria	Gammaproteobacteria	4.4666	52.2	-	CCUC01	6	4515	4156	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639628	GCA_000983565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/565/GCA_000983565.1_PA063	-	-
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.952	32.7	-	CFNL01	22	3121	2989	3/15/15	3/5/17	Contig	SC	SAMEA1569579	GCA_001351015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/015/GCA_001351015.1_8489_7_37	-	E2125
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.95245	32.7	-	CIEO01	25	3153	2990	4/21/15	3/5/17	Contig	SC	SAMEA1569581	GCA_001351035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/035/GCA_001351035.1_8489_7_46	-	E2125
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5626	282268	Proteobacteria	Gammaproteobacteria	4.55029	52.2	-	CCNT01	9	4640	4281	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639571	GCA_000983595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/595/GCA_000983595.1_PA083	25092320	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.72918	50.8	-	NLJF01	76	4826	4579	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993217	GCA_002227425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/425/GCA_002227425.1_ASM222742v1	-	MOD1-EC5654
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37575	65.6	-	FPWZ01	57	4277	4084	11/23/16	3/14/17	Scaffold	SC	SAMEA2682805	GCA_900123085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/085/GCA_900123085.1_14892_2_15	-	2926STDY5723556
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.06665	39.6	-	CFFD01	57	2262	2009	3/15/15	3/15/17	Scaffold	SC	SAMEA1023758	GCA_001334775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/775/GCA_001334775.1_6649_8_17	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.05578	39.8	-	CHOB01	52	2270	2043	4/21/15	3/5/17	Scaffold	SC	SAMEA1023773	GCA_001334815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/815/GCA_001334815.1_6631_4_17	-	34
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.31878	65.6	-	FPXF01	70	4242	4067	11/23/16	3/14/17	Scaffold	SC	SAMEA2682807	GCA_900123095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/095/GCA_900123095.1_14892_2_16	-	2926STDY5723558
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.98935	50.8	-	NLJH01	141	5286	4892	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993215	GCA_002227455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/455/GCA_002227455.1_ASM222745v1	-	MOD1-EC5652
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5583	282226	Proteobacteria	Gammaproteobacteria	4.53971	52.1	-	CCUP01	1	4624	4260	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639689	GCA_000983625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/625/GCA_000983625.1_PA039	-	-
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.95946	32.7	-	CFVG01	30	3154	3001	3/15/15	3/5/17	Contig	SC	SAMEA1569584	GCA_001351055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/055/GCA_001351055.1_8489_7_35	-	E2125
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.87896	32.7	-	CVHN01	28	3047	2913	4/2/15	3/5/17	Contig	SC	SAMEA1569585	GCA_001351075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/075/GCA_001351075.1_8489_7_27	-	UKST63/485
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5665	282306	Proteobacteria	Gammaproteobacteria	4.55441	52.2	-	CCLA01	5	4637	4291	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633642	GCA_000983645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/645/GCA_000983645.1_PA122	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.86193	50.7	-	NLJG01	45	4862	4595	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993216	GCA_002227465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/465/GCA_002227465.1_ASM222746v1	-	MOD1-EC5653
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37278	65.6	-	FPXE01	69	4284	4084	11/23/16	3/14/17	Scaffold	SC	SAMEA2682808	GCA_900123105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/105/GCA_900123105.1_14892_2_17	-	2926STDY5723559
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07987	39.6	-	CFBN01	92	2278	2032	3/15/15	3/5/17	Scaffold	SC	SAMEA1023780	GCA_001334835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/835/GCA_001334835.1_6630_4_16	-	15B
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.25943	39.8	-	CHNS01	107	2455	2183	4/21/15	3/5/17	Scaffold	SC	SAMEA1023782	GCA_001334875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/875/GCA_001334875.1_6631_5_7	-	5
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37824	65.6	-	FPXG01	70	4294	4095	11/23/16	3/14/17	Scaffold	SC	SAMEA2682809	GCA_900123115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/115/GCA_900123115.1_14892_2_18	-	2926STDY5723560
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.04951	50.7	-	NLJQ01	154	5339	4942	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993202	GCA_002227495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/495/GCA_002227495.1_ASM222749v1	-	MOD1-EC5642
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5660	282301	Proteobacteria	Gammaproteobacteria	4.49926	52.2	-	CCLI01	2	4539	4185	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2637235	GCA_000983685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/685/GCA_000983685.1_PA116	-	-
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.91187	32.7	-	CVJR01	26	3082	2928	4/2/15	3/5/17	Contig	SC	SAMEA1569590	GCA_001351095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/095/GCA_001351095.1_8489_7_47	-	E4278
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.85523	32.7	-	CVHU01	31	3010	2886	4/2/15	3/5/17	Contig	SC	SAMEA1569593	GCA_001351115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/115/GCA_001351115.1_8489_7_12	-	UK13136
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5685	282326	Proteobacteria	Gammaproteobacteria	4.53273	52.2	-	CCKR01	7	4611	4263	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633621	GCA_000983705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/705/GCA_000983705.1_PA142	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.25071	50.6	-	NLKE01	357	5680	5119	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993229	GCA_002227505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/505/GCA_002227505.1_ASM222750v1	-	MOD1-EC5627
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36101	65.6	-	FPXD01	72	4293	4080	11/23/16	3/14/17	Scaffold	SC	SAMEA2682780	GCA_900123125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/125/GCA_900123125.1_14892_2_2	-	2926STDY5723531
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10834	39.7	-	CHOS01	59	2271	2015	4/21/15	3/15/17	Scaffold	SC	SAMEA1023787	GCA_001334895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/895/GCA_001334895.1_6664_1_21	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.16367	39.6	-	CHGT01	60	2408	2157	4/21/15	3/5/17	Scaffold	SC	SAMEA1023789	GCA_001334915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/915/GCA_001334915.1_6664_1_7	-	14
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36936	65.6	-	FPXJ01	75	4273	4081	11/23/16	3/14/17	Scaffold	SC	SAMEA2682811	GCA_900123135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/135/GCA_900123135.1_14892_2_20	-	2926STDY5723562
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.61691	50.8	-	NLJP01	146	4814	4425	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993203	GCA_002227535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/535/GCA_002227535.1_ASM222753v1	-	MOD1-EC5643
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5669	282310	Proteobacteria	Gammaproteobacteria	4.57004	52.2	-	CCTA01	2	4650	4282	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633638	GCA_000983735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/735/GCA_000983735.1_PA126	-	-
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.87604	32.7	-	CVHE01	26	3046	2916	4/2/15	3/5/17	Contig	SC	SAMEA1569595	GCA_001351135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/135/GCA_001351135.1_8489_7_21	-	UKST63/485
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.86472	32.7	-	CVGY01	23	3007	2885	4/2/15	3/5/17	Contig	SC	SAMEA1569597	GCA_001351155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/155/GCA_001351155.1_8489_7_14	-	UK13136
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5581	282224	Proteobacteria	Gammaproteobacteria	4.57541	52.2	-	CCLQ01	1	4637	4273	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639691	GCA_000983755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/755/GCA_000983755.1_PA037	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.04851	50.5	-	NLJB01	73	5226	4898	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452864	GCA_002227555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/555/GCA_002227555.1_ASM222755v1	-	MOD1-EC5658
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37146	65.6	-	FPXH01	82	4288	4086	11/23/16	3/14/17	Scaffold	SC	SAMEA2682814	GCA_900123145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/145/GCA_900123145.1_14892_2_21	-	2926STDY5723565
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.20196	39.6	-	CGWJ01	66	2438	2182	4/21/15	3/5/17	Scaffold	SC	SAMEA1023800	GCA_001334955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/955/GCA_001334955.1_6673_8_8	-	SMRU248
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10715	39.7	-	CHNX01	131	2276	1972	4/21/15	3/15/17	Scaffold	SC	SAMEA1023819	GCA_001334995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/334/995/GCA_001334995.1_6631_5_20	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.38579	65.6	-	FPXI01	57	4282	4102	11/23/16	3/14/17	Scaffold	SC	SAMEA2682815	GCA_900123155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/155/GCA_900123155.1_14892_2_22	-	2926STDY5723566
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.66854	50.9	-	NLJI01	139	4910	4479	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993214	GCA_002227565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/565/GCA_002227565.1_ASM222756v1	-	MOD1-EC5651
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5682	282323	Proteobacteria	Gammaproteobacteria	4.54611	52.2	-	CCSR01	6	4635	4283	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633624	GCA_000983775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/775/GCA_000983775.1_PA139	-	-
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.8664	32.7	-	CVHO01	14	3048	2892	4/2/15	3/5/17	Contig	SC	SAMEA1569598	GCA_001351175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/175/GCA_001351175.1_8489_7_7	-	UK13136
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.95655	32.7	-	CFVH01	26	3150	2995	3/15/15	3/5/17	Contig	SC	SAMEA1569601	GCA_001351195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/195/GCA_001351195.1_8489_7_34	-	E2125
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5671	282312	Proteobacteria	Gammaproteobacteria	4.60866	52.2	-	CCKX01	3	4693	4333	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633636	GCA_000983795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/795/GCA_000983795.1_PA128	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.92167	50.8	-	NLJJ01	178	5219	4802	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993213	GCA_002227585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/585/GCA_002227585.1_ASM222758v1	-	MOD1-EC5650
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36256	65.6	-	FPXL01	86	4272	4073	11/23/16	3/14/17	Scaffold	SC	SAMEA2682822	GCA_900123165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/165/GCA_900123165.1_14892_2_25	-	2926STDY5723573
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10749	39.6	-	CHOF01	67	2293	2053	4/21/15	3/5/17	Scaffold	SC	SAMEA1023825	GCA_001335035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/035/GCA_001335035.1_6631_3_16	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07032	39.5	-	CHNL01	77	2286	2032	4/21/15	3/5/17	Scaffold	SC	SAMEA1023829	GCA_001335055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/055/GCA_001335055.1_6630_2_1	-	16F
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37886	65.6	-	FPXK01	66	4289	4092	11/23/16	3/14/17	Scaffold	SC	SAMEA2682825	GCA_900123175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/175/GCA_900123175.1_14892_2_26	-	2926STDY5723576
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.84345	50.8	-	NLOB01	148	5001	4740	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440332	GCA_002227615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/615/GCA_002227615.1_ASM222761v1	-	MOD1-EC5487
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5558	282201	Proteobacteria	Gammaproteobacteria	4.60264	52.1	-	CCLZ01	2	4685	4315	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2646073	GCA_000983835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/835/GCA_000983835.1_PA014	-	-
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.87324	32.7	-	CVHV01	23	3046	2913	4/2/15	3/5/17	Contig	SC	SAMEA1569605	GCA_001351215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/215/GCA_001351215.1_8489_7_20	-	UKST63/485
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.87261	32.7	-	CVHG01	19	3069	2913	4/2/15	3/5/17	Contig	SC	SAMEA1569607	GCA_001351235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/235/GCA_001351235.1_8489_7_25	-	UKST63/485
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5595	282238	Proteobacteria	Gammaproteobacteria	4.56705	52.2	-	CCUI01	1	4622	4273	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639638	GCA_000983855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/855/GCA_000983855.1_PA051	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.0373	50.7	-	NLJK01	172	5329	4905	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993212	GCA_002227625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/625/GCA_002227625.1_ASM222762v1	-	MOD1-EC5649
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37721	65.6	-	FPXM01	69	4283	4085	11/23/16	3/14/17	Scaffold	SC	SAMEA2682826	GCA_900123185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/185/GCA_900123185.1_14892_2_27	-	2926STDY5723577
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15481	39.7	-	CHGN01	49	2380	2111	4/21/15	3/15/17	Scaffold	SC	SAMEA1023855	GCA_001335095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/095/GCA_001335095.1_6593_5_10	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07842	39.6	-	CFFB01	61	2285	2043	3/15/15	3/5/17	Scaffold	SC	SAMEA1023856	GCA_001335115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/115/GCA_001335115.1_6631_5_22	-	14
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37259	65.6	-	FPXN01	73	4291	4098	11/23/16	3/14/17	Scaffold	SC	SAMEA2682830	GCA_900123195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/195/GCA_900123195.1_14892_2_30	-	2926STDY5723581
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.8587	50.8	-	NLJL01	118	5057	4695	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993210	GCA_002227655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/655/GCA_002227655.1_ASM222765v1	-	MOD1-EC5647
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5648	282290	Proteobacteria	Gammaproteobacteria	4.56889	52.2	-	CCTL01	1	4648	4278	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2637246	GCA_000983875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/875/GCA_000983875.1_PA105	-	-
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.86078	32.7	-	CVHF01	22	3008	2887	4/2/15	3/5/17	Contig	SC	SAMEA1569608	GCA_001351255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/255/GCA_001351255.1_8489_7_5	-	UK13136
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.87393	32.7	-	CVHL01	25	3045	2911	4/2/15	3/5/17	Contig	SC	SAMEA1569609	GCA_001351275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/275/GCA_001351275.1_8489_7_33	-	UKST63/485
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5604	282247	Proteobacteria	Gammaproteobacteria	4.53141	52.2	-	CCUH01	1	4587	4225	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639629	GCA_000983895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/895/GCA_000983895.1_PA062	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.98009	50.8	-	NLJM01	186	5243	4811	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993208	GCA_002227665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/665/GCA_002227665.1_ASM222766v1	-	MOD1-EC5646
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37385	65.6	-	FPXO01	71	4296	4088	11/23/16	3/14/17	Scaffold	SC	SAMEA2682828	GCA_900123205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/205/GCA_900123205.1_14892_2_28	-	2926STDY5723579
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15977	39.6	-	CIBV01	103	2400	2149	4/21/15	3/5/17	Scaffold	SC	SAMEA1023857	GCA_001335135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/135/GCA_001335135.1_6630_3_10	-	19B
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11182	39.5	-	CFDX01	54	2323	2091	3/15/15	3/5/17	Scaffold	SC	SAMEA1023861	GCA_001335155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/155/GCA_001335155.1_6664_1_12	-	14
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.38252	65.6	-	FPXP01	72	4303	4090	11/23/16	3/14/17	Scaffold	SC	SAMEA2682831	GCA_900123215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/215/GCA_900123215.1_14892_2_31	-	2926STDY5723582
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.22715	50.5	-	NLKR01	212	5502	5170	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440358	GCA_002227695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/695/GCA_002227695.1_ASM222769v1	-	MOD1-EC5582
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5592	282235	Proteobacteria	Gammaproteobacteria	4.52125	52.2	-	CCUJ01	1	4587	4213	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639641	GCA_000983915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/915/GCA_000983915.1_PA048	-	-
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.87333	32.7	-	CVHH01	23	3039	2911	4/2/15	3/5/17	Contig	SC	SAMEA1569617	GCA_001351295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/295/GCA_001351295.1_8489_7_24	-	UKST63/485
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.87302	32.7	-	CVHT01	22	3038	2913	4/2/15	3/5/17	Contig	SC	SAMEA1569618	GCA_001351315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/315/GCA_001351315.1_8489_7_26	-	UKST63/485
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5575	282218	Proteobacteria	Gammaproteobacteria	4.57614	52.2	-	CCUV01	1	4642	4290	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2646049	GCA_000983935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/935/GCA_000983935.1_PA031	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.69279	50.5	-	NLKF01	308	6035	5466	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993228	GCA_002227705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/705/GCA_002227705.1_ASM222770v1	-	MOD1-EC5626
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37304	65.6	-	FPXQ01	68	4273	4084	11/23/16	3/14/17	Scaffold	SC	SAMEA2682832	GCA_900123225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/225/GCA_900123225.1_14892_2_32	-	2926STDY5723583
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09808	39.6	-	CHOM01	54	2309	2069	4/21/15	3/5/17	Scaffold	SC	SAMEA1023867	GCA_001335175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/175/GCA_001335175.1_6631_5_5	-	14
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09881	39.6	-	CFES01	102	2292	2041	3/15/15	3/14/17	Scaffold	SC	SAMEA1023903	GCA_001335255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/255/GCA_001335255.1_6630_1_10	-	6B
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32608	65.6	-	FPXR01	61	4256	4064	11/23/16	3/14/17	Scaffold	SC	SAMEA2682837	GCA_900123235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/235/GCA_900123235.1_14892_2_33	-	2926STDY5723588
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.64445	50.8	-	NLJN01	129	4883	4476	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993205	GCA_002227725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/725/GCA_002227725.1_ASM222772v1	-	MOD1-EC5645
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5589	282232	Proteobacteria	Gammaproteobacteria	4.53328	52.2	-	CCUM01	1	4596	4222	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639663	GCA_000983955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/955/GCA_000983955.1_PA045	-	-
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.85763	32.7	-	CVHK01	22	3035	2886	4/2/15	3/5/17	Contig	SC	SAMEA1569625	GCA_001351335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/335/GCA_001351335.1_8489_7_6	-	UK13136
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.88019	32.7	-	CVGX01	22	3051	2922	4/2/15	3/5/17	Contig	SC	SAMEA1569626	GCA_001351355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/355/GCA_001351355.1_8489_7_32	-	UKST63/485
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5602	282245	Proteobacteria	Gammaproteobacteria	4.57927	52.2	-	CCLM01	3	4653	4289	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639631	GCA_000983975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/975/GCA_000983975.1_PA059	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.24029	50.2	-	NLKD01	200	5580	4974	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993196	GCA_002227735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/735/GCA_002227735.1_ASM222773v1	-	MOD1-EC5628
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32807	65.6	-	FPXS01	55	4247	4069	11/23/16	3/14/17	Scaffold	SC	SAMEA2682839	GCA_900123245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/245/GCA_900123245.1_14892_2_34	-	2926STDY5723590
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.12337	39.4	-	CHNR01	68	2320	2089	4/21/15	3/11/17	Scaffold	SC	SAMEA1023906	GCA_001335275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/275/GCA_001335275.1_6593_5_2	-	19F
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.03842	40	-	CHNU01	178	2310	2010	4/21/15	3/11/17	Scaffold	SC	SAMEA1023909	GCA_001335315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/315/GCA_001335315.1_6593_5_21	-	32A
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35471	65.6	-	FPXT01	74	4283	4097	11/23/16	3/14/17	Scaffold	SC	SAMEA2682840	GCA_900123255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/255/GCA_900123255.1_14892_2_35	-	2926STDY5723591
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.78887	50.7	-	NLKG01	129	5084	4622	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993227	GCA_002227775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/775/GCA_002227775.1_ASM222777v1	-	MOD1-EC5625
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5638	282280	Proteobacteria	Gammaproteobacteria	4.56914	52.2	-	CCMD01	2	4650	4276	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2638832	GCA_000983995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/995/GCA_000983995.1_PA095	-	-
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.86006	32.7	-	CVGV01	17	3011	2886	4/2/15	3/5/17	Contig	SC	SAMEA1569630	GCA_001351375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/375/GCA_001351375.1_8489_7_17	-	UK13136
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.86263	32.7	-	CVIA01	19	3039	2888	4/2/15	3/5/17	Contig	SC	SAMEA1569631	GCA_001351395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/395/GCA_001351395.1_8489_7_8	-	UK13136
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5656	282297	Proteobacteria	Gammaproteobacteria	4.6096	52.2	-	CCTI01	1	4695	4323	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2637239	GCA_000984025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/025/GCA_000984025.1_PA112	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.99488	50.5	-	NLJV01	151	5136	4740	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993193	GCA_002227785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/785/GCA_002227785.1_ASM222778v1	-	MOD1-EC5636
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.38146	65.6	-	FPXV01	65	4301	4097	11/23/16	3/14/17	Scaffold	SC	SAMEA2682847	GCA_900123265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/265/GCA_900123265.1_14892_2_36	-	2926STDY5723598
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10427	39.5	-	CHNY01	80	2312	2061	4/21/15	3/14/17	Scaffold	SC	SAMEA1023913	GCA_001335335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/335/GCA_001335335.1_6641_6_7	-	23F
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.08008	39.6	-	CHNH01	120	2289	2049	4/21/15	3/11/17	Scaffold	SC	SAMEA1023921	GCA_001335355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/355/GCA_001335355.1_6630_2_24	-	4
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37333	65.6	-	FPXU01	67	4272	4077	11/23/16	3/14/17	Scaffold	SC	SAMEA2682848	GCA_900123275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/275/GCA_900123275.1_14892_2_37	-	2926STDY5723599
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.97848	50.6	-	NLJO01	96	5264	4885	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993207	GCA_002227795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/795/GCA_002227795.1_ASM222779v1	-	MOD1-EC5644
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5556	282199	Proteobacteria	Gammaproteobacteria	4.62008	52.2	-	CCVG01	3	4699	4335	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2646075	GCA_000984045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/045/GCA_000984045.1_PA012	-	-
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.85893	32.7	-	CVHC01	16	3035	2881	4/2/15	3/5/17	Contig	SC	SAMEA1569632	GCA_001351415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/415/GCA_001351415.1_8489_7_3	-	UK13136
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.88433	32.7	-	CVHX01	29	3050	2924	4/2/15	3/5/17	Contig	SC	SAMEA1569634	GCA_001351435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/435/GCA_001351435.1_8489_7_22	-	UKST63/485
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5675	282316	Proteobacteria	Gammaproteobacteria	4.56703	52.2	-	CCSV01	2	4639	4274	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633632	GCA_000984075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/075/GCA_000984075.1_PA132	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.2081	50.4	-	NLKS01	194	5411	5108	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440359	GCA_002227815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/815/GCA_002227815.1_ASM222781v1	-	MOD1-EC5581
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37231	65.6	-	FPXW01	73	4283	4087	11/23/16	3/14/17	Scaffold	SC	SAMEA2682783	GCA_900123285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/285/GCA_900123285.1_14892_2_4	-	2926STDY5723534
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04178	39.5	-	CHOA01	61	2208	1997	4/21/15	3/11/17	Scaffold	SC	SAMEA1023941	GCA_001335395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/395/GCA_001335395.1_6631_5_17	-	37
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.06153	39.6	-	CHPA01	32	2265	1990	4/21/15	3/11/17	Scaffold	SC	SAMEA1023951	GCA_001335415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/415/GCA_001335415.1_6664_1_3	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36977	65.6	-	FPXX01	79	4289	4089	11/23/16	3/14/17	Scaffold	SC	SAMEA2682864	GCA_900123295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/295/GCA_900123295.1_14892_2_40	-	2926STDY5723616
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.03758	50.7	-	NLKH01	118	5270	4960	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993226	GCA_002227855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/855/GCA_002227855.1_ASM222785v1	-	MOD1-EC5624
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5553	282196	Proteobacteria	Gammaproteobacteria	4.56606	52.2	-	CCLX01	1	4638	4270	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2646078	GCA_000984095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/095/GCA_000984095.1_PA009	-	-
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.88015	32.7	-	CVHY01	24	3046	2916	4/2/15	3/5/17	Contig	SC	SAMEA1569636	GCA_001351455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/455/GCA_001351455.1_8489_7_31	-	UKST63/485
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.95167	32.7	-	CHCT01	26	3149	2988	4/21/15	3/5/17	Contig	SC	SAMEA1569639	GCA_001351475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/475/GCA_001351475.1_8489_7_42	-	E2125
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5609	282252	Proteobacteria	Gammaproteobacteria	4.61566	52.2	-	CCUD01	1	4703	4333	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639584	GCA_000984115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/115/GCA_000984115.1_PA067	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.74186	50.7	-	NLKO01	143	4878	4581	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440465	GCA_002227865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/865/GCA_002227865.1_ASM222786v1	-	MOD1-EC5585
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3652	65.6	-	FPXY01	68	4274	4089	11/23/16	3/14/17	Scaffold	SC	SAMEA2682876	GCA_900123305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/305/GCA_900123305.1_14892_2_42	-	2926STDY5723628
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10255	39.6	-	CHGR01	63	2272	2055	4/21/15	3/11/17	Scaffold	SC	SAMEA1023956	GCA_001335435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/435/GCA_001335435.1_6631_5_1	-	6B
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.05907	39.5	-	CHGS01	60	2280	2049	4/21/15	3/11/17	Scaffold	SC	SAMEA1023964	GCA_001335475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/475/GCA_001335475.1_6631_3_17	-	15B
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35354	65.6	-	FPXZ01	69	4278	4073	11/23/16	3/14/17	Scaffold	SC	SAMEA2682879	GCA_900123315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/315/GCA_900123315.1_14892_2_43	-	2926STDY5723631
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.03012	50.5	-	NLJX01	98	5185	4771	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993209	GCA_002227875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/875/GCA_002227875.1_ASM222787v1	-	MOD1-EC5634
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5572	282215	Proteobacteria	Gammaproteobacteria	4.60356	52.2	-	CCUX01	2	4687	4329	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2646058	GCA_000984135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/135/GCA_000984135.1_PA028	-	-
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.9079	32.7	-	CFIK01	17	3093	2930	3/15/15	3/5/17	Contig	SC	SAMEA1569640	GCA_001351495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/495/GCA_001351495.1_8489_7_54	-	E4278
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.85933	32.7	-	CVGW01	14	3035	2885	4/2/15	3/5/17	Contig	SC	SAMEA1569641	GCA_001351515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/515/GCA_001351515.1_8489_7_9	-	UK13136
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5574	282217	Proteobacteria	Gammaproteobacteria	4.60536	52.2	-	CCLV01	2	4698	4253	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2646050	GCA_000984155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/155/GCA_000984155.1_PA030	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.64045	50.6	-	NLJW01	79	4834	4381	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993192	GCA_002227885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/885/GCA_002227885.1_ASM222788v1	-	MOD1-EC5635
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.39233	65.6	-	FPYA01	67	4295	4110	11/23/16	3/14/17	Scaffold	SC	SAMEA2682886	GCA_900123325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/325/GCA_900123325.1_14892_2_44	-	2926STDY5723638
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.01425	39.7	-	CFHE01	42	2205	1987	3/15/15	3/11/17	Scaffold	SC	SAMEA1023975	GCA_001335495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/495/GCA_001335495.1_6631_6_19	-	18A
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10052	39.8	-	CHQQ01	124	2294	2102	4/21/15	3/11/17	Scaffold	SC	SAMEA1023979	GCA_001335515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/515/GCA_001335515.1_6714_8_20	-	SMRU572
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.33058	65.6	-	FPYB01	79	4254	4066	11/23/16	3/14/17	Scaffold	SC	SAMEA2682892	GCA_900123335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/335/GCA_900123335.1_14892_2_45	-	2926STDY5723644
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.37107	50.5	-	NLJZ01	369	5958	5233	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993204	GCA_002227935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/935/GCA_002227935.1_ASM222793v1	-	MOD1-EC5632
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5611	282254	Proteobacteria	Gammaproteobacteria	4.60679	51.8	-	CCTZ01	53	4675	4294	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639582	GCA_000984175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/175/GCA_000984175.1_PA069	-	-
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.85974	32.7	-	CVGU01	16	3033	2883	4/2/15	3/5/17	Contig	SC	SAMEA1569644	GCA_001351535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/535/GCA_001351535.1_8489_7_4	-	UK13136
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.95057	32.7	-	CHJE01	20	3147	2994	4/21/15	3/5/17	Contig	SC	SAMEA1569645	GCA_001351555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/555/GCA_001351555.1_8489_7_44	-	E2125
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5645	282287	Proteobacteria	Gammaproteobacteria	4.5784	52.2	-	CCML01	2	4647	4286	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2638394	GCA_000984195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/195/GCA_000984195.1_PA102	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.88943	50.5	-	NLKP01	171	5124	4775	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440356	GCA_002227945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/945/GCA_002227945.1_ASM222794v1	-	MOD1-EC5584
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37633	65.6	-	FPYC01	69	4286	4089	11/23/16	3/14/17	Scaffold	SC	SAMEA2682906	GCA_900123345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/345/GCA_900123345.1_14892_2_48	-	2926STDY5723658
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.98628	39.6	-	CFBO01	52	2184	1967	3/15/15	3/11/17	Scaffold	SC	SAMEA1024004	GCA_001335555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/555/GCA_001335555.1_6631_4_21	-	11A
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.0946	39.6	-	CGVZ01	82	2293	2026	4/21/15	3/11/17	Scaffold	SC	SAMEA1024016	GCA_001335575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/575/GCA_001335575.1_6630_3_17	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37153	65.6	-	FPYD01	64	4277	4087	11/23/16	3/14/17	Scaffold	SC	SAMEA2682911	GCA_900123355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/355/GCA_900123355.1_14892_2_49	-	2926STDY5723663
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.55382	50.3	-	NLKB01	364	6142	5459	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993198	GCA_002227955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/955/GCA_002227955.1_ASM222795v1	-	MOD1-EC5630
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5644	282286	Proteobacteria	Gammaproteobacteria	4.58931	52.1	-	CCTN01	8	4672	4308	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2638430	GCA_000984215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/215/GCA_000984215.1_PA101	-	-
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.87286	32.7	-	CVHM01	24	3039	2907	4/2/15	3/5/17	Contig	SC	SAMEA1569646	GCA_001351575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/575/GCA_001351575.1_8489_7_29	-	UKST63/485
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.87482	32.7	-	CVHW01	20	3044	2913	4/2/15	3/5/17	Contig	SC	SAMEA1569648	GCA_001351595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/595/GCA_001351595.1_8489_7_23	-	UKST63/485
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5610	282253	Proteobacteria	Gammaproteobacteria	4.49389	52.2	-	CCUB01	1	4520	4159	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639583	GCA_000984235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/235/GCA_000984235.1_PA068	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.22525	50.5	-	NLKA01	270	5644	5054	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993201	GCA_002227985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/227/985/GCA_002227985.1_ASM222798v1	-	MOD1-EC5631
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36576	65.6	-	FPYE01	74	4293	4076	11/23/16	3/14/17	Scaffold	SC	SAMEA2682786	GCA_900123365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/365/GCA_900123365.1_14892_2_5	-	2926STDY5723537
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11965	39.5	-	CHPZ01	122	2323	2100	4/21/15	3/11/17	Scaffold	SC	SAMEA1024026	GCA_001335595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/595/GCA_001335595.1_6714_8_22	-	SMRU574
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.0624	39.6	-	CFCJ01	70	2240	1975	3/15/15	3/11/17	Scaffold	SC	SAMEA1024029	GCA_001335615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/615/GCA_001335615.1_6630_1_2	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.373	65.6	-	FPYF01	70	4283	4089	11/23/16	3/14/17	Scaffold	SC	SAMEA2682917	GCA_900123375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/375/GCA_900123375.1_14892_2_50	-	2926STDY5723669
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.00351	50.5	-	NLLP01	188	5277	4899	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440380	GCA_002228015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/015/GCA_002228015.1_ASM222801v1	-	MOD1-EC5558
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5580	282223	Proteobacteria	Gammaproteobacteria	4.53727	52.2	-	CCUR01	3	4624	4252	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639711	GCA_000984255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/255/GCA_000984255.1_PA036	-	-
Staphylococcus aureus	1280	PRJEB2812	204380	Terrabacteria group	Firmicutes	2.90648	32.7	-	CHCQ01	15	3086	2926	4/21/15	3/5/17	Contig	SC	SAMEA1569649	GCA_001351615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/615/GCA_001351615.1_8489_7_53	-	E4278
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.91934	32.6	-	CGED01	43	3086	2953	3/15/15	3/5/17	Contig	SC	SAMEA1324519	GCA_001351635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/635/GCA_001351635.1_7738_4_56	-	USFL337
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5561	282204	Proteobacteria	Gammaproteobacteria	4.65401	52	-	CCVD01	8	4763	4393	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2646070	GCA_000984275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/275/GCA_000984275.1_PA017	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.03058	50.6	-	NLKQ01	259	5316	4981	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440357	GCA_002228025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/025/GCA_002228025.1_ASM222802v1	-	MOD1-EC5583
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.33487	65.6	-	FPYH01	67	4261	4070	11/23/16	3/14/17	Scaffold	SC	SAMEA2682919	GCA_900123385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/385/GCA_900123385.1_14892_2_51	-	2926STDY5723671
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11239	39.6	-	CHOT01	87	2345	2089	4/21/15	3/14/17	Scaffold	SC	SAMEA1024032	GCA_001335635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/635/GCA_001335635.1_6641_6_20	-	4
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15149	39.4	-	CHNT01	69	2419	2169	4/21/15	3/11/17	Scaffold	SC	SAMEA1024039	GCA_001335675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/675/GCA_001335675.1_6631_3_7	-	10B
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36446	65.6	-	FPYI01	69	4268	4082	11/23/16	3/14/17	Scaffold	SC	SAMEA2682920	GCA_900123395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/395/GCA_900123395.1_14892_2_52	-	2926STDY5723672
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.24428	50.5	-	NLLE01	392	5635	5062	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440370	GCA_002228035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/035/GCA_002228035.1_ASM222803v1	-	MOD1-EC5569
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5678	282319	Proteobacteria	Gammaproteobacteria	4.56913	52.2	-	CCKT01	2	4643	4274	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633628	GCA_000984295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/295/GCA_000984295.1_PA135	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.8673	32.6	-	CHFF01	38	3028	2883	4/21/15	3/5/17	Contig	SC	SAMEA1324524	GCA_001351655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/655/GCA_001351655.1_7748_4_61	-	USFL060
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.77789	32.6	-	CHEO01	39	2885	2759	4/21/15	3/5/17	Contig	SC	SAMEA1324533	GCA_001351675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/675/GCA_001351675.1_7748_4_93	-	USFL091
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5587	282230	Proteobacteria	Gammaproteobacteria	4.48953	52.2	-	CCUO01	2	4527	4161	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639685	GCA_000984315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/315/GCA_000984315.1_PA043	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.16508	50.7	-	NLKI01	259	5421	4993	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04993225	GCA_002228055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/055/GCA_002228055.1_ASM222805v1	-	MOD1-EC5623
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37314	65.6	-	FPYG01	71	4278	4086	11/23/16	3/14/17	Scaffold	SC	SAMEA2682926	GCA_900123405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/405/GCA_900123405.1_14892_2_53	-	2926STDY5723678
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.1454	39.5	-	CFGR01	64	2404	2129	3/15/15	3/11/17	Scaffold	SC	SAMEA1024061	GCA_001335695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/695/GCA_001335695.1_6673_8_3	-	SMRU243
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.05145	39.5	-	CHNW01	91	2254	2015	4/21/15	3/11/17	Scaffold	SC	SAMEA1024064	GCA_001335715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/715/GCA_001335715.1_6630_3_5	-	15B
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37631	65.6	-	FPYJ01	59	4274	4088	11/23/16	3/14/17	Scaffold	SC	SAMEA2682932	GCA_900123415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/415/GCA_900123415.1_14892_2_54	-	2926STDY5723684
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.93786	50.3	-	NLKJ01	504	6290	5710	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440462	GCA_002228095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/095/GCA_002228095.1_ASM222809v1	-	MOD1-EC5590
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5600	282243	Proteobacteria	Gammaproteobacteria	4.59878	52.2	-	CCME01	2	4683	4316	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639633	GCA_000984335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/335/GCA_000984335.1_PA056	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.91831	32.6	-	CFPB01	33	3087	2963	3/15/15	3/5/17	Contig	SC	SAMEA1324534	GCA_001351695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/695/GCA_001351695.1_7738_4_55	-	USFL336
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.86532	32.6	-	CGEE01	34	3009	2879	3/15/15	3/5/17	Contig	SC	SAMEA1324541	GCA_001351715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/715/GCA_001351715.1_7738_3_14	-	USFL202
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5639	282281	Proteobacteria	Gammaproteobacteria	4.56091	52.2	-	CCVJ01	14	4639	4279	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2638785	GCA_000984355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/355/GCA_000984355.1_PA096	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.94148	50.7	-	NLKK01	172	5205	4899	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440463	GCA_002228105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/105/GCA_002228105.1_ASM222810v1	-	MOD1-EC5589
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3783	65.6	-	FPYL01	57	4282	4093	11/23/16	3/14/17	Scaffold	SC	SAMEA2682945	GCA_900123425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/425/GCA_900123425.1_14892_2_57	-	2926STDY5723697
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07767	39.6	-	CFHJ01	51	2287	2090	3/15/15	3/11/17	Scaffold	SC	SAMEA1024069	GCA_001335735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/735/GCA_001335735.1_6631_3_10	-	6B
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.96002	39.8	-	CFCS01	81	2123	1863	3/15/15	3/11/17	Scaffold	SC	SAMEA1024075	GCA_001335775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/775/GCA_001335775.1_6631_7_16	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36203	65.6	-	FPYK01	76	4265	4080	11/23/16	3/14/17	Scaffold	SC	SAMEA2682946	GCA_900123435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/435/GCA_900123435.1_14892_2_58	-	2926STDY5723698
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.7275	50.5	-	NLLN01	159	4958	4518	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440379	GCA_002228115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/115/GCA_002228115.1_ASM222811v1	-	MOD1-EC5560
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5670	282311	Proteobacteria	Gammaproteobacteria	4.54547	52.2	-	CCSY01	6	4627	4276	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633637	GCA_000984375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/375/GCA_000984375.1_PA127	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87704	32.6	-	CIGH01	38	3016	2895	4/21/15	3/5/17	Contig	SC	SAMEA1324542	GCA_001351735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/735/GCA_001351735.1_7738_3_41	-	USFL228
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.82216	32.7	-	CHEH01	26	2968	2847	4/21/15	3/5/17	Contig	SC	SAMEA1324543	GCA_001351755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/755/GCA_001351755.1_7738_3_75	-	USFL261
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5577	282220	Proteobacteria	Gammaproteobacteria	4.57067	52.2	-	CCUU01	4	4653	4273	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2645826	GCA_000984395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/395/GCA_000984395.1_PA033	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.13942	50.4	-	NLKL01	137	5365	5046	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440464	GCA_002228125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/125/GCA_002228125.1_ASM222812v1	-	MOD1-EC5588
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37598	65.5	-	FPYM01	85	4306	4103	11/23/16	3/14/17	Scaffold	SC	SAMEA2682948	GCA_900123445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/445/GCA_900123445.1_14892_2_59	-	2926STDY5723700
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.08864	39.6	-	CIBT01	53	2306	2069	4/21/15	3/11/17	Scaffold	SC	SAMEA1024080	GCA_001335795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/795/GCA_001335795.1_6631_6_2	-	14
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.05077	39.7	-	CHOJ01	49	2245	2025	4/21/15	3/11/17	Scaffold	SC	SAMEA1024096	GCA_001335855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/855/GCA_001335855.1_6649_8_4	-	17F
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36199	65.6	-	FPYN01	73	4282	4074	11/23/16	3/14/17	Scaffold	SC	SAMEA2682949	GCA_900123455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/455/GCA_900123455.1_14892_2_60	-	2926STDY5723701
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.03986	50.6	-	NLLD01	300	5353	4929	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440369	GCA_002228175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/175/GCA_002228175.1_ASM222817v1	-	MOD1-EC5570
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5555	282198	Proteobacteria	Gammaproteobacteria	4.58329	52.2	-	CCMA01	2	4658	4282	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2646076	GCA_000984415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/415/GCA_000984415.1_PA011	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87668	32.6	-	CFJM01	46	3023	2892	3/15/15	3/5/17	Contig	SC	SAMEA1324546	GCA_001351775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/775/GCA_001351775.1_7748_4_14	-	USFL014
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.85051	32.6	-	CFPG01	39	2991	2874	3/15/15	3/5/17	Contig	SC	SAMEA1324549	GCA_001351795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/795/GCA_001351795.1_7748_4_28	-	USFL027
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5677	282318	Proteobacteria	Gammaproteobacteria	4.5628	52.2	-	CCSU01	2	4637	4272	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633629	GCA_000984435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/435/GCA_000984435.1_PA134	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.80902	50.7	-	NLKN01	286	5052	4663	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05464522	GCA_002228185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/185/GCA_002228185.1_ASM222818v1	-	MOD1-EC5586
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36789	65.6	-	FPYO01	85	4303	4084	11/23/16	3/14/17	Scaffold	SC	SAMEA2682963	GCA_900123465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/465/GCA_900123465.1_14892_2_63	-	2926STDY5723716
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10301	39.6	-	CHGP01	140	2352	2101	4/21/15	3/11/17	Scaffold	SC	SAMEA1024098	GCA_001335875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/875/GCA_001335875.1_6630_4_12	-	23F
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04451	39.5	-	CFCK01	117	2252	2013	3/15/15	3/11/17	Scaffold	SC	SAMEA1024100	GCA_001335895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/895/GCA_001335895.1_6630_4_22	-	15B
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36822	65.6	-	FPYP01	65	4275	4084	11/23/16	3/14/17	Scaffold	SC	SAMEA2682964	GCA_900123475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/475/GCA_900123475.1_14892_2_64	-	2926STDY5723717
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.052	50.6	-	NLKM01	241	5289	4936	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05464521	GCA_002228215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/215/GCA_002228215.1_ASM222821v1	-	MOD1-EC5587
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5679	282320	Proteobacteria	Gammaproteobacteria	4.77862	52	-	CCKS01	21	4890	4501	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633627	GCA_000984455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/455/GCA_000984455.1_PA136	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.84973	32.6	-	CFPF01	51	2977	2844	3/15/15	3/5/17	Contig	SC	SAMEA1324551	GCA_001351815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/815/GCA_001351815.1_7748_4_11	-	USFL011
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.75237	32.7	-	CFJP01	28	2866	2755	3/15/15	3/5/17	Contig	SC	SAMEA1324555	GCA_001351835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/835/GCA_001351835.1_7738_4_5	-	USFL287
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5557	282200	Proteobacteria	Gammaproteobacteria	4.76217	52	-	CCVF01	19	4870	4489	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2646074	GCA_000984475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/475/GCA_000984475.1_PA013	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.91487	50.6	-	NLMC01	250	5193	4760	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452871	GCA_002228225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/225/GCA_002228225.1_ASM222822v1	-	MOD1-EC5542
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.38612	65.6	-	FPYQ01	63	4286	4102	11/23/16	3/14/17	Scaffold	SC	SAMEA2682966	GCA_900123485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/485/GCA_900123485.1_14892_2_65	-	2926STDY5723719
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.99241	39.8	-	CFBM01	73	2182	1951	3/15/15	3/11/17	Scaffold	SC	SAMEA1024130	GCA_001335935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/935/GCA_001335935.1_6630_2_5	-	3
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.08916	39.6	-	CFCQ01	116	2323	2076	3/15/15	3/14/17	Scaffold	SC	SAMEA1024142	GCA_001335975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/975/GCA_001335975.1_6630_4_11	-	4
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36812	65.5	-	FPYR01	76	4282	4081	11/23/16	3/14/17	Scaffold	SC	SAMEA2682968	GCA_900123495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/495/GCA_900123495.1_14892_2_66	-	2926STDY5723721
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.9806	50.7	-	NLKT01	147	5194	4872	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440360	GCA_002228235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/235/GCA_002228235.1_ASM222823v1	-	MOD1-EC5580
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5680	282321	Proteobacteria	Gammaproteobacteria	4.5658	52.2	-	CCST01	1	4647	4281	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633626	GCA_000984495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/495/GCA_000984495.1_PA137	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87831	32.6	-	CFOY01	36	3024	2900	3/15/15	3/5/17	Contig	SC	SAMEA1324556	GCA_001351855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/855/GCA_001351855.1_7738_3_4	-	USFL192
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87144	32.6	-	CFPP01	34	3015	2885	3/15/15	3/5/17	Contig	SC	SAMEA1324557	GCA_001351875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/875/GCA_001351875.1_7738_3_89	-	USFL275
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5672	282313	Proteobacteria	Gammaproteobacteria	4.56808	52.2	-	CCKU01	2	4644	4275	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633635	GCA_000984515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/515/GCA_000984515.1_PA129	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.33896	50.4	-	NLKU01	495	5724	5215	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440361	GCA_002228265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/265/GCA_002228265.1_ASM222826v1	-	MOD1-EC5579
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3277	65.6	-	FPYS01	68	4261	4072	11/23/16	3/14/17	Scaffold	SC	SAMEA2682969	GCA_900123505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/505/GCA_900123505.1_14892_2_67	-	2926STDY5723722
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.1291	39.6	-	CHOQ01	75	2348	2087	4/21/15	3/11/17	Scaffold	SC	SAMEA1024143	GCA_001335995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/335/995/GCA_001335995.1_6649_8_9	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10594	39.6	-	CHOU01	62	2322	2084	4/21/15	3/11/17	Scaffold	SC	SAMEA1024148	GCA_001336015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/015/GCA_001336015.1_6664_1_18	-	9V
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.38965	65.6	-	FPYT01	60	4278	4101	11/23/16	3/14/17	Scaffold	SC	SAMEA2682970	GCA_900123515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/515/GCA_900123515.1_14892_2_68	-	2926STDY5723723
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.22958	50.5	-	NLLG01	371	5557	5119	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440372	GCA_002228295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/295/GCA_002228295.1_ASM222829v1	-	MOD1-EC5567
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5588	282231	Proteobacteria	Gammaproteobacteria	4.51947	52.2	-	CCUL01	20	4592	4197	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639684	GCA_000984535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/535/GCA_000984535.1_PA044	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88071	32.6	-	CHEF01	29	3026	2893	4/21/15	3/5/17	Contig	SC	SAMEA1324558	GCA_001351895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/895/GCA_001351895.1_7738_3_32	-	USFL219
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.85414	32.6	-	CFPT01	34	2997	2879	3/15/15	3/5/17	Contig	SC	SAMEA1324559	GCA_001351915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/915/GCA_001351915.1_7738_4_31	-	USFL312
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5687	282328	Proteobacteria	Gammaproteobacteria	4.54825	52.2	-	CCKY01	2	4641	4281	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633619	GCA_000984555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/555/GCA_000984555.1_PA145	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.16881	50.6	-	NLLC01	323	5531	5146	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440368	GCA_002228305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/305/GCA_002228305.1_ASM222830v1	-	MOD1-EC5571
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37944	65.6	-	FPYU01	73	4297	4096	11/23/16	3/14/17	Scaffold	SC	SAMEA2682971	GCA_900123525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/525/GCA_900123525.1_14892_2_69	-	2926STDY5723724
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.0754	39.7	-	CFFG01	78	2294	2064	3/15/15	3/11/17	Scaffold	SC	SAMEA1024154	GCA_001336035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/035/GCA_001336035.1_6641_6_19	-	19F
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09742	39.5	-	CHON01	54	2289	2056	4/21/15	3/11/17	Scaffold	SC	SAMEA1024161	GCA_001336075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/075/GCA_001336075.1_6664_1_17	-	19A
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37477	65.6	-	FPYV01	73	4281	4093	11/23/16	3/14/17	Scaffold	SC	SAMEA2682788	GCA_900123535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/535/GCA_900123535.1_14892_2_7	-	2926STDY5723539
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.73325	50.8	-	NLLO01	79	4914	4629	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05464524	GCA_002228335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/335/GCA_002228335.1_ASM222833v1	-	MOD1-EC5559
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5596	282239	Proteobacteria	Gammaproteobacteria	4.56563	52.2	-	CCUG01	2	4633	4277	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639637	GCA_000984575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/575/GCA_000984575.1_PA052	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.93304	32.6	-	CFQA01	47	3112	2976	3/15/15	3/5/17	Contig	SC	SAMEA1324560	GCA_001351935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/935/GCA_001351935.1_7738_4_6	-	USFL288
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.85024	32.6	-	CFOX01	31	2958	2831	3/15/15	3/5/17	Contig	SC	SAMEA1324563	GCA_001351955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/955/GCA_001351955.1_7738_3_31	-	USFL218
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5657	282298	Proteobacteria	Gammaproteobacteria	4.5668	52.2	-	CCLG01	1	4647	4276	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2637238	GCA_000984595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/595/GCA_000984595.1_PA113	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.99797	50.6	-	NLKW01	336	5283	4773	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05464523	GCA_002228355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/355/GCA_002228355.1_ASM222835v1	-	MOD1-EC5577
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32952	65.6	-	FPYX01	78	4253	4065	11/23/16	3/14/17	Scaffold	SC	SAMEA2682972	GCA_900123545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/545/GCA_900123545.1_14892_2_70	-	2926STDY5723725
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.16761	39.7	-	CGVY01	96	2419	2163	4/21/15	3/14/17	Scaffold	SC	SAMEA1024162	GCA_001336095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/095/GCA_001336095.1_6630_4_8	-	35F
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07413	39.8	-	CIBU01	64	2291	2079	4/21/15	3/11/17	Scaffold	SC	SAMEA1024167	GCA_001336115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/115/GCA_001336115.1_6631_7_3	-	34
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36505	65.6	-	FPYZ01	73	4275	4066	11/23/16	3/14/17	Scaffold	SC	SAMEA2682973	GCA_900123555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/555/GCA_900123555.1_14892_2_71	-	2926STDY5723726
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.17929	50.6	-	NLLB01	326	5549	5157	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440367	GCA_002228375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/375/GCA_002228375.1_ASM222837v1	-	MOD1-EC5572
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5646	282288	Proteobacteria	Gammaproteobacteria	4.56072	52.2	-	CCLO01	17	4645	4283	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2638371	GCA_000984615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/615/GCA_000984615.1_PA103A	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88168	32.6	-	CGGS01	27	3025	2900	3/15/15	3/5/17	Contig	SC	SAMEA1324565	GCA_001351975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/975/GCA_001351975.1_7738_3_42	-	USFL229
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.86824	32.6	-	CFOJ01	54	3008	2886	3/15/15	3/5/17	Contig	SC	SAMEA1324567	GCA_001351995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/351/995/GCA_001351995.1_7738_3_15	-	USFL203
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5684	282325	Proteobacteria	Gammaproteobacteria	4.57789	52.2	-	CCTM01	2	4654	4283	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633622	GCA_000984635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/635/GCA_000984635.1_PA141	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.50151	50.4	-	NLKV01	226	5711	5300	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440362	GCA_002228385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/385/GCA_002228385.1_ASM222838v1	-	MOD1-EC5578
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.39711	65.6	-	FPYW01	72	4310	4106	11/23/16	3/14/17	Scaffold	SC	SAMEA2682975	GCA_900123565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/565/GCA_900123565.1_14892_2_73	-	2926STDY5723728
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.03787	39.8	-	CHGL01	45	2292	2040	4/21/15	3/11/17	Scaffold	SC	SAMEA1024191	GCA_001336175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/175/GCA_001336175.1_6593_4_10	-	35F
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.05868	39.6	-	CHNG01	77	2266	2059	4/21/15	3/5/17	Scaffold	SC	SAMEA1024205	GCA_001336195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/195/GCA_001336195.1_6630_1_7	-	11A
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.39257	65.6	-	FPZA01	73	4297	4103	11/23/16	3/14/17	Scaffold	SC	SAMEA2682974	GCA_900123575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/575/GCA_900123575.1_14892_2_72	-	2926STDY5723727
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.11899	50.6	-	NLLF01	212	5432	5027	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440371	GCA_002228395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/395/GCA_002228395.1_ASM222839v1	-	MOD1-EC5568
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5676	282317	Proteobacteria	Gammaproteobacteria	4.77894	52	-	CCKZ01	10	4894	4505	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633630	GCA_000984655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/655/GCA_000984655.1_PA133	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.85664	32.6	-	CFPA01	71	3017	2866	3/15/15	3/5/17	Contig	SC	SAMEA1324568	GCA_001352015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/015/GCA_001352015.1_7748_4_13	-	USFL013
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.89835	32.7	-	CIFW01	25	3058	2935	4/21/15	3/5/17	Contig	SC	SAMEA1324570	GCA_001352035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/035/GCA_001352035.1_7738_4_72	-	USFL352
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5653	282295	Proteobacteria	Gammaproteobacteria	4.5787	52.2	-	CCTJ01	1	4651	4283	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2637241	GCA_000984675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/675/GCA_000984675.1_PA110	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.37163	50.6	-	NLKX01	313	5585	5163	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440363	GCA_002228435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/435/GCA_002228435.1_ASM222843v1	-	MOD1-EC5576
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37115	65.6	-	FPYY01	71	4278	4078	11/23/16	3/14/17	Scaffold	SC	SAMEA2682976	GCA_900123585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/585/GCA_900123585.1_14892_2_74	-	2926STDY5723729
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07602	39.6	-	CFCR01	65	2253	2012	3/15/15	3/15/17	Scaffold	SC	SAMEA1024207	GCA_001336215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/215/GCA_001336215.1_6649_8_20	-	22A
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10029	39.6	-	CHOH01	606	2417	2012	4/21/15	3/5/17	Scaffold	SC	SAMEA1888678	GCA_001336255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/255/GCA_001336255.1_6649_7_12	-	SMRU540
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36635	65.5	-	FPZC01	74	4281	4084	11/23/16	3/14/17	Scaffold	SC	SAMEA2682978	GCA_900123595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/595/GCA_900123595.1_14892_2_75	-	2926STDY5723731
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.1719	50.6	-	NLKY01	343	5535	5123	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440364	GCA_002228445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/445/GCA_002228445.1_ASM222844v1	-	MOD1-EC5575
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5674	282315	Proteobacteria	Gammaproteobacteria	4.56844	52.2	-	CCSW01	2	4643	4275	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633633	GCA_000984695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/695/GCA_000984695.1_PA131	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88122	32.6	-	CFOR01	50	3052	2896	3/15/15	3/5/17	Contig	SC	SAMEA1324572	GCA_001352055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/055/GCA_001352055.1_7748_4_27	-	USFL026
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.8719	32.6	-	CGGZ01	30	3016	2891	3/15/15	3/5/17	Contig	SC	SAMEA1324575	GCA_001352075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/075/GCA_001352075.1_7738_3_88	-	USFL274
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5662	282303	Proteobacteria	Gammaproteobacteria	4.62744	52.1	-	CCVH01	2	4723	4353	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2637233	GCA_000984715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/715/GCA_000984715.1_PA118	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.3381	50.6	-	NLKZ01	353	5583	5114	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440365	GCA_002228465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/465/GCA_002228465.1_ASM222846v1	-	MOD1-EC5574
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32959	65.6	-	FPZB01	79	4255	4061	11/23/16	3/14/17	Scaffold	SC	SAMEA2682986	GCA_900123605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/605/GCA_900123605.1_14892_2_77	-	2926STDY5723739
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.12415	39.6	-	CHMU01	112	2355	2087	4/21/15	3/6/17	Scaffold	SC	SAMEA974611	GCA_001336335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/335/GCA_001336335.1_6259_6_16	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.03304	39.6	-	CHMY01	46	2254	2028	4/21/15	3/5/17	Scaffold	SC	SAMEA974612	GCA_001336355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/355/GCA_001336355.1_6259_7_12	-	11A
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37161	65.6	-	FPZD01	88	4284	4082	11/23/16	3/14/17	Scaffold	SC	SAMEA2682989	GCA_900123615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/615/GCA_900123615.1_14892_2_78	-	2926STDY5723742
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.36789	50.6	-	NLLA01	336	5586	5155	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440366	GCA_002228485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/485/GCA_002228485.1_ASM222848v1	-	MOD1-EC5573
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5683	282324	Proteobacteria	Gammaproteobacteria	4.55257	52.2	-	CCKW01	2	4630	4261	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633623	GCA_000984735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/735/GCA_000984735.1_PA140	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88223	32.7	-	CIGB01	22	3042	2919	4/21/15	3/5/17	Contig	SC	SAMEA1324578	GCA_001352095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/095/GCA_001352095.1_7738_3_35	-	USFL222
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88141	32.6	-	CHEY01	59	3032	2901	4/21/15	3/5/17	Contig	SC	SAMEA1324582	GCA_001352115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/115/GCA_001352115.1_7748_4_55	-	USFL054
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5552	282195	Proteobacteria	Gammaproteobacteria	4.56829	52.1	-	CCTE01	7	4647	4268	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2646079	GCA_000984755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/755/GCA_000984755.1_PA008	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.78084	50.7	-	NLLH01	79	4919	4667	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440373	GCA_002228515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/515/GCA_002228515.1_ASM222851v1	-	MOD1-EC5566
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35668	65.5	-	FPZG01	95	4305	4071	11/23/16	3/14/17	Scaffold	SC	SAMEA2682990	GCA_900123625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/625/GCA_900123625.1_14892_2_79	-	2926STDY5723743
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.02613	39.6	-	CHNN01	60	2236	2023	4/21/15	3/5/17	Scaffold	SC	SAMEA974613	GCA_001336375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/375/GCA_001336375.1_6259_7_13	-	11A
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.16274	39.7	-	CHND01	68	2311	2056	4/21/15	3/5/17	Scaffold	SC	SAMEA974619	GCA_001336395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/395/GCA_001336395.1_6259_7_11	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36778	65.6	-	FPZF01	74	4275	4071	11/23/16	3/14/17	Scaffold	SC	SAMEA2682789	GCA_900123635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/635/GCA_900123635.1_14892_2_8	-	2926STDY5723540
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.85932	50.7	-	NLLI01	261	5120	4733	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440374	GCA_002228535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/535/GCA_002228535.1_ASM222853v1	-	MOD1-EC5565
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5632	282274	Proteobacteria	Gammaproteobacteria	4.60315	52.2	-	CCTS01	4	4733	4322	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639167	GCA_000984775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/775/GCA_000984775.1_PA089	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87969	32.6	-	CHEP01	30	3021	2892	4/21/15	3/5/17	Contig	SC	SAMEA1324589	GCA_001352135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/135/GCA_001352135.1_7738_3_87	-	USFL273
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87589	32.7	-	CFPH01	38	3048	2917	3/15/15	3/5/17	Contig	SC	SAMEA1324591	GCA_001352155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/155/GCA_001352155.1_7738_3_34	-	USFL221
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5630	282272	Proteobacteria	Gammaproteobacteria	4.62575	52.1	-	CCLJ01	3	4722	4364	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639262	GCA_000984795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/795/GCA_000984795.1_PA087	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.91293	50.6	-	NLLJ01	275	5188	4806	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440375	GCA_002228545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/545/GCA_002228545.1_ASM222854v1	-	MOD1-EC5564
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.60503	64.9	-	FPZK01	501	4415	4180	11/23/16	3/14/17	Scaffold	SC	SAMEA2682994	GCA_900123645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/645/GCA_900123645.1_14892_2_82	-	2926STDY5723747
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04261	39.6	-	CFET01	36	2243	2034	3/15/15	3/5/17	Scaffold	SC	SAMEA974627	GCA_001336415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/415/GCA_001336415.1_6259_7_21	-	23B
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07726	39.6	-	CIHD01	33	2279	2000	4/21/15	3/6/17	Scaffold	SC	SAMEA974628	GCA_001336435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/435/GCA_001336435.1_6259_6_1	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36237	65.5	-	FPZE01	89	4303	4081	11/23/16	3/14/17	Scaffold	SC	SAMEA2682995	GCA_900123655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/655/GCA_900123655.1_14892_2_83	-	2926STDY5723748
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.72809	50.8	-	NLLK01	133	4873	4558	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440376	GCA_002228565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/565/GCA_002228565.1_ASM222856v1	-	MOD1-EC5563
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5673	282314	Proteobacteria	Gammaproteobacteria	4.57593	52.2	-	CCSX01	9	4662	4319	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633634	GCA_000984815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/815/GCA_000984815.1_PA130	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.91184	32.6	-	CIAB01	54	3064	2931	4/21/15	3/5/17	Contig	SC	SAMEA1324594	GCA_001352175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/175/GCA_001352175.1_7748_4_56	-	USFL055
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.83745	32.6	-	CGDT01	29	2956	2836	3/15/15	3/5/17	Contig	SC	SAMEA1324600	GCA_001352195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/195/GCA_001352195.1_7738_4_59	-	USFL340
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5618	282261	Proteobacteria	Gammaproteobacteria	4.54001	52.2	-	CCTW01	1	4605	4243	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639575	GCA_000984835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/835/GCA_000984835.1_PA076	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.92518	50.7	-	NLLL01	159	5133	4814	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440377	GCA_002228585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/585/GCA_002228585.1_ASM222858v1	-	MOD1-EC5562
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37104	65.6	-	FPZH01	80	4273	4077	11/23/16	3/14/17	Scaffold	SC	SAMEA2682992	GCA_900123665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/665/GCA_900123665.1_14892_2_81	-	2926STDY5723745
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.99423	39.8	-	CHNI01	83	2138	1860	4/21/15	3/15/17	Scaffold	SC	SAMEA974629	GCA_001336455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/455/GCA_001336455.1_6259_7_19	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.1749	39.5	-	CFEZ01	75	2423	2173	3/15/15	3/5/17	Scaffold	SC	SAMEA974633	GCA_001336475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/475/GCA_001336475.1_6259_7_15	-	34
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37577	65.6	-	FPZJ01	67	4289	4092	11/23/16	3/14/17	Scaffold	SC	SAMEA2682997	GCA_900123675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/675/GCA_900123675.1_14892_2_85	-	2926STDY5723750
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.83535	50.3	-	NLMQ01	99	4872	4573	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440395	GCA_002228615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/615/GCA_002228615.1_ASM222861v1	-	MOD1-EC5527
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5564	282207	Proteobacteria	Gammaproteobacteria	4.57899	52.2	-	CCLU01	1	4653	4291	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2646067	GCA_000984855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/855/GCA_000984855.1_PA020	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.922	32.6	-	CGDV01	49	3087	2958	3/15/15	3/5/17	Contig	SC	SAMEA1324603	GCA_001352235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/235/GCA_001352235.1_7748_4_89	-	USFL087
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87427	32.6	-	CHEI01	33	3016	2893	4/21/15	3/5/17	Contig	SC	SAMEA1324604	GCA_001352255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/255/GCA_001352255.1_7738_3_40	-	USFL227
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5650	282292	Proteobacteria	Gammaproteobacteria	4.58587	52.2	-	CCTK01	13	4665	4288	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2637244	GCA_000984875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/875/GCA_000984875.1_PA107	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.74758	50.8	-	NLME01	108	4903	4598	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452872	GCA_002228625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/625/GCA_002228625.1_ASM222862v1	-	MOD1-EC5540
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.34441	65.5	-	FPZI01	80	4260	4068	11/23/16	3/14/17	Scaffold	SC	SAMEA2682998	GCA_900123685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/685/GCA_900123685.1_14892_2_86	-	2926STDY5723751
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.147	39.6	-	CHNJ01	66	2361	2106	4/21/15	3/5/17	Scaffold	SC	SAMEA974635	GCA_001336495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/495/GCA_001336495.1_6259_7_24	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.08695	39.7	-	CGVU01	63	2293	2092	4/21/15	3/5/17	Scaffold	SC	SAMEA974637	GCA_001336515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/515/GCA_001336515.1_6259_8_2	-	19F
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37144	65.6	-	FPZN01	63	4282	4099	11/23/16	3/14/17	Scaffold	SC	SAMEA2683001	GCA_900123695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/695/GCA_900123695.1_14892_2_88	-	2926STDY5723754
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.7646	50.6	-	NLMD01	102	4895	4594	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05451388	GCA_002228655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/655/GCA_002228655.1_ASM222865v1	-	MOD1-EC5541
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5612	282255	Proteobacteria	Gammaproteobacteria	4.52512	52.2	-	CCNU01	1	4587	4232	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639581	GCA_000984895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/895/GCA_000984895.1_PA070	25092320	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.91226	32.6	-	CIAP01	40	3057	2927	4/21/15	3/5/17	Contig	SC	SAMEA1324605	GCA_001352275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/275/GCA_001352275.1_7738_3_33	-	USFL220
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87674	32.6	-	CGGN01	38	3021	2895	3/15/15	3/5/17	Contig	SC	SAMEA1324607	GCA_001352295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/295/GCA_001352295.1_7748_4_33	-	USFL032
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5598	282241	Proteobacteria	Gammaproteobacteria	4.55987	52.2	-	CCNV01	1	4642	4273	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639635	GCA_000984915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/915/GCA_000984915.1_PA054	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.61955	50.9	-	NLLM01	142	4820	4469	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440378	GCA_002228675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/675/GCA_002228675.1_ASM222867v1	-	MOD1-EC5561
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.38976	65.6	-	FPZO01	74	4295	4105	11/23/16	3/14/17	Scaffold	SC	SAMEA2683002	GCA_900123705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/705/GCA_900123705.1_14892_2_89	-	2926STDY5723755
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15054	39.6	-	CIBS01	78	2402	2136	4/21/15	3/5/17	Scaffold	SC	SAMEA974640	GCA_001336535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/535/GCA_001336535.1_6259_8_5	-	14
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.12893	39.7	-	CVJZ01	48	2290	2014	4/2/15	3/15/17	Scaffold	SC	SAMEA974644	GCA_001336555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/555/GCA_001336555.1_6259_8_9	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35981	65.6	-	FPZL01	87	4294	4089	11/23/16	3/14/17	Scaffold	SC	SAMEA2682791	GCA_900123715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/715/GCA_900123715.1_14892_2_9	-	2926STDY5723542
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.60598	50.5	-	NLLQ01	124	4762	4402	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440381	GCA_002228695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/695/GCA_002228695.1_ASM222869v1	-	MOD1-EC5557
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5559	282202	Proteobacteria	Gammaproteobacteria	4.56456	52.2	-	CCLW01	3	4663	4281	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2646072	GCA_000984935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/935/GCA_000984935.1_PA015	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.82852	32.6	-	CFOK01	50	2982	2849	3/15/15	3/5/17	Contig	SC	SAMEA1324609	GCA_001352315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/315/GCA_001352315.1_7748_4_71	-	USFL069
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.91272	32.6	-	CHKK01	47	3056	2929	4/21/15	3/5/17	Contig	SC	SAMEA1324611	GCA_001352335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/335/GCA_001352335.1_7748_4_57	-	USFL056
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5563	282206	Proteobacteria	Gammaproteobacteria	4.56386	52.2	-	CCLY01	11	4653	4273	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2646068	GCA_000984955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/955/GCA_000984955.1_PA019	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.12562	50.6	-	NLMG01	188	5341	4977	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452875	GCA_002228705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/705/GCA_002228705.1_ASM222870v1	-	MOD1-EC5538
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37498	65.6	-	FPZP01	70	4282	4085	11/23/16	3/14/17	Scaffold	SC	SAMEA2683003	GCA_900123725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/725/GCA_900123725.1_14892_2_90	-	2926STDY5723756
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.03777	39.7	-	CHNM01	42	2244	2034	4/21/15	3/5/17	Scaffold	SC	SAMEA974646	GCA_001336575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/575/GCA_001336575.1_6259_7_20	-	23B
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09154	39.9	-	CGVP01	74	2254	1962	4/21/15	3/15/17	Scaffold	SC	SAMEA974647	GCA_001336595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/595/GCA_001336595.1_6259_5_22	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32967	65.6	-	FPZM01	83	4270	4071	11/23/16	3/14/17	Scaffold	SC	SAMEA2683004	GCA_900123735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/735/GCA_900123735.1_14892_2_91	-	2926STDY5723757
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.93002	50.7	-	NLLR01	211	5068	4749	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440382	GCA_002228725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/725/GCA_002228725.1_ASM222872v1	-	MOD1-EC5556
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5629	282271	Proteobacteria	Gammaproteobacteria	4.68358	52.1	-	CCLL01	23	4825	4429	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639432	GCA_000984975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/975/GCA_000984975.1_PA086	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88081	32.6	-	CGEG01	35	3029	2897	3/15/15	3/5/17	Contig	SC	SAMEA1324624	GCA_001352355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/355/GCA_001352355.1_7748_4_7	-	USFL007
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92598	32.6	-	CIFV01	41	3111	2966	4/21/15	3/5/17	Contig	SC	SAMEA1324626	GCA_001352375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/375/GCA_001352375.1_7738_3_39	-	USFL226
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5691	282332	Proteobacteria	Gammaproteobacteria	4.53899	52.2	-	CCSM01	1	4599	4232	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633141	GCA_000984995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/984/995/GCA_000984995.1_PA047	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.65442	50.8	-	NLMF01	70	4768	4499	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452874	GCA_002228755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/755/GCA_002228755.1_ASM222875v1	-	MOD1-EC5539
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37191	65.6	-	FPZQ01	84	4282	4080	11/23/16	3/14/17	Scaffold	SC	SAMEA2683005	GCA_900123745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/745/GCA_900123745.1_14892_2_92	-	2926STDY5723758
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.11688	39.6	-	CGVV01	70	2332	2110	4/21/15	3/5/17	Scaffold	SC	SAMEA974649	GCA_001336615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/615/GCA_001336615.1_6259_6_4	-	6C
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.10544	39.4	-	CGVT01	69	2347	2111	4/21/15	3/5/17	Scaffold	SC	SAMEA974656	GCA_001336635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/635/GCA_001336635.1_6259_8_10	-	10B
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36935	65.6	-	FPZR01	60	4267	4092	11/23/16	3/14/17	Scaffold	SC	SAMEA2683008	GCA_900123755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/755/GCA_900123755.1_14892_2_93	-	2926STDY5723761
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.34124	50.4	-	NLNP01	200	5485	5104	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440353	GCA_002228775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/775/GCA_002228775.1_ASM222877v1	-	MOD1-EC5501
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5597	282240	Proteobacteria	Gammaproteobacteria	4.55924	52.1	-	CCUF01	2	4612	4268	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639636	GCA_000985015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/015/GCA_000985015.1_PA053	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92434	32.6	-	CGDR01	30	3092	2963	3/15/15	3/5/17	Contig	SC	SAMEA1324628	GCA_001352395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/395/GCA_001352395.1_7738_3_65	-	USFL252
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92376	32.7	-	CHES01	24	3089	2961	4/21/15	3/5/17	Contig	SC	SAMEA1324633	GCA_001352415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/415/GCA_001352415.1_7738_3_36	-	USFL223
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5560	282203	Proteobacteria	Gammaproteobacteria	4.5796	52.2	-	CCLT01	1	4658	4286	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2646060	GCA_000985035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/035/GCA_000985035.1_PA026	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.00857	50.7	-	NLLS01	166	5270	4957	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440383	GCA_002228785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/785/GCA_002228785.1_ASM222878v1	-	MOD1-EC5555
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37736	65.6	-	FPZS01	59	4278	4083	11/23/16	3/14/17	Scaffold	SC	SAMEA2683009	GCA_900123765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/765/GCA_900123765.1_14892_2_94	-	2926STDY5723762
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.14137	39.6	-	CIHI01	50	2311	2047	4/21/15	3/15/17	Scaffold	SC	SAMEA974657	GCA_001336655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/655/GCA_001336655.1_6259_8_13	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.02801	39.7	-	CHGM01	56	2237	2019	4/21/15	3/5/17	Scaffold	SC	SAMEA974658	GCA_001336675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/675/GCA_001336675.1_6259_8_12	-	11A
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36965	65.6	-	FPZT01	74	4292	4090	11/23/16	3/14/17	Scaffold	SC	SAMEA2683011	GCA_900123775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/775/GCA_900123775.1_14892_2_95	-	2926STDY5723764
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.48586	50.3	-	NLMB01	335	6103	5487	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452867	GCA_002228815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/815/GCA_002228815.1_ASM222881v1	-	MOD1-EC5543
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5616	282259	Proteobacteria	Gammaproteobacteria	4.6175	52.1	-	CCMC01	2	4728	4344	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639577	GCA_000985055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/055/GCA_000985055.1_PA074	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92615	32.7	-	CGDQ01	36	3093	2966	3/15/15	3/5/17	Contig	SC	SAMEA1324638	GCA_001352435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/435/GCA_001352435.1_7738_3_64	-	USFL251
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.78699	32.7	-	CIAF01	43	2933	2815	4/21/15	3/5/17	Contig	SC	SAMEA1324639	GCA_001352455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/455/GCA_001352455.1_7738_3_20	-	USFL207
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5566	282209	Proteobacteria	Gammaproteobacteria	4.53721	52.2	-	CCUZ01	2	4591	4231	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2646065	GCA_000985075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/075/GCA_000985075.1_PA022	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.02114	50.6	-	NLMA01	257	5378	4969	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452866	GCA_002228835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/835/GCA_002228835.1_ASM222883v1	-	MOD1-EC5544
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36047	65.6	-	FPZU01	68	4271	4081	11/23/16	3/14/17	Scaffold	SC	SAMEA2682875	GCA_900123785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/785/GCA_900123785.1_14893_2_1	-	2926STDY5723627
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.07143	40	-	CGVR01	645	2241	1950	4/21/15	3/5/17	Scaffold	SC	SAMEA974666	GCA_001336695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/695/GCA_001336695.1_6259_8_20	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04852	39.7	-	CFCP01	129	2251	2024	3/15/15	3/5/17	Scaffold	SC	SAMEA974667	GCA_001336715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/715/GCA_001336715.1_6259_8_21	-	17F
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37105	65.6	-	FPZW01	64	4264	4090	11/23/16	3/14/17	Scaffold	SC	SAMEA2682888	GCA_900123795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/795/GCA_900123795.1_14893_2_11	-	2926STDY5723640
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.71188	50.7	-	NLLU01	116	4855	4612	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440386	GCA_002228855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/855/GCA_002228855.1_ASM222885v1	-	MOD1-EC5551
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5658	282299	Proteobacteria	Gammaproteobacteria	4.62441	52.2	-	CCLF01	2	4715	4347	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2637237	GCA_000985095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/095/GCA_000985095.1_PA114	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88154	32.6	-	CFOM01	31	3026	2899	3/15/15	3/5/17	Contig	SC	SAMEA1324641	GCA_001352475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/475/GCA_001352475.1_7738_3_84	-	USFL270
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.86664	32.6	-	CHEW01	35	3005	2885	4/21/15	3/5/17	Contig	SC	SAMEA1324646	GCA_001352495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/495/GCA_001352495.1_7748_4_17	-	USFL017
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5627	282269	Proteobacteria	Gammaproteobacteria	4.5739	52.1	-	CCTU01	23	4659	4284	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639532	GCA_000985115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/115/GCA_000985115.1_PA084	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.14337	50.6	-	NLLT01	198	5401	5041	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440385	GCA_002228865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/865/GCA_002228865.1_ASM222886v1	-	MOD1-EC5552
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36703	65.6	-	FPZV01	67	4275	4085	11/23/16	3/14/17	Scaffold	SC	SAMEA2682890	GCA_900123805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/805/GCA_900123805.1_14893_2_13	-	2926STDY5723642
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.1185	39.8	-	CGVQ01	433	2285	1980	4/21/15	3/6/17	Scaffold	SC	SAMEA974668	GCA_001336735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/735/GCA_001336735.1_6259_6_9	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.17246	39.5	-	CFBC01	57	2406	2162	3/15/15	3/15/17	Scaffold	SC	SAMEA974676	GCA_001336755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/755/GCA_001336755.1_6259_5_15	-	6B
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37163	65.6	-	FPZX01	72	4273	4083	11/23/16	3/14/17	Scaffold	SC	SAMEA2682891	GCA_900123815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/815/GCA_900123815.1_14893_2_14	-	2926STDY5723643
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.88334	50.8	-	NLNC01	103	5117	4803	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05464528	GCA_002228875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/875/GCA_002228875.1_ASM222887v1	-	MOD1-EC5514
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5585	282228	Proteobacteria	Gammaproteobacteria	4.55709	52.2	-	CCUN01	2	4630	4276	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639687	GCA_000985135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/135/GCA_000985135.1_PA041	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88107	32.6	-	CHEG01	31	3027	2895	4/21/15	3/5/17	Contig	SC	SAMEA1324652	GCA_001352515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/515/GCA_001352515.1_7738_4_25	-	USFL306
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92281	32.6	-	CFQH01	30	3093	2962	3/15/15	3/5/17	Contig	SC	SAMEA1324656	GCA_001352535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/535/GCA_001352535.1_7738_3_92	-	USFL278
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5654	282296	Proteobacteria	Gammaproteobacteria	4.5684	52.2	-	CCLE01	1	4651	4286	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2637240	GCA_000985155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/155/GCA_000985155.1_PA111	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.15521	50.6	-	NLLV01	198	5432	5051	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440387	GCA_002228915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/915/GCA_002228915.1_ASM222891v1	-	MOD1-EC5550
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.38946	65.6	-	FPZY01	67	4282	4100	11/23/16	3/14/17	Scaffold	SC	SAMEA2682894	GCA_900123825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/825/GCA_900123825.1_14893_2_16	-	2926STDY5723646
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.04359	39.5	-	CFDV01	73	2246	2026	3/15/15	3/11/17	Scaffold	SC	SAMEA974680	GCA_001336775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/775/GCA_001336775.1_6259_5_19	-	19B
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.09746	39.7	-	CHMM01	207	2257	1994	4/21/15	3/11/17	Scaffold	SC	SAMEA974689	GCA_001336795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/795/GCA_001336795.1_6259_5_9	-	type strain: N
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36267	65.6	-	FPZZ01	68	4266	4081	11/23/16	3/14/17	Scaffold	SC	SAMEA2682895	GCA_900123835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/835/GCA_900123835.1_14893_2_17	-	2926STDY5723647
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.89587	50.7	-	NLMR01	153	5069	4748	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440396	GCA_002228935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/935/GCA_002228935.1_ASM222893v1	-	MOD1-EC5526
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5628	282270	Proteobacteria	Gammaproteobacteria	4.60417	52.2	-	CCTR01	1	4686	4327	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639480	GCA_000985175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/175/GCA_000985175.1_PA085	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88576	32.6	-	CHKP01	35	3044	2922	4/21/15	3/5/17	Contig	SC	SAMEA1324658	GCA_001352555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/555/GCA_001352555.1_7748_4_65	-	USFL064
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87898	32.6	-	CIAJ01	34	3022	2894	4/21/15	3/5/17	Contig	SC	SAMEA1324664	GCA_001352575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/575/GCA_001352575.1_7738_4_26	-	USFL307
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5573	282216	Proteobacteria	Gammaproteobacteria	4.55615	52.2	-	CCUW01	2	4633	4260	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2646057	GCA_000985195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/195/GCA_000985195.1_PA029	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.03313	50.5	-	NLLW01	195	5068	4743	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440388	GCA_002228945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/945/GCA_002228945.1_ASM222894v1	-	MOD1-EC5549
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36482	65.6	-	FQAA01	70	4266	4075	11/23/16	3/14/17	Scaffold	SC	SAMEA2682897	GCA_900123845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/845/GCA_900123845.1_14893_2_18	-	2926STDY5723649
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.19316	39.7	-	CFFA01	82	2402	2141	3/15/15	3/11/17	Scaffold	SC	SAMEA974696	GCA_001336815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/815/GCA_001336815.1_6259_7_3	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.13731	39.6	-	CHUL01	79	2386	2130	4/21/15	3/11/17	Scaffold	SC	SAMEA1024539	GCA_001336895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/895/GCA_001336895.1_6805_1_9	-	SMRU1017
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35982	65.6	-	FQAC01	76	4270	4077	11/23/16	3/14/17	Scaffold	SC	SAMEA2682898	GCA_900123855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/855/GCA_900123855.1_14893_2_19	-	2926STDY5723650
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.24997	50.4	-	NLLX01	212	5452	5063	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05464525	GCA_002228955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/955/GCA_002228955.1_ASM222895v1	-	MOD1-EC5548
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5586	282229	Proteobacteria	Gammaproteobacteria	4.57901	52.2	-	CCLP01	1	4642	4288	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639686	GCA_000985215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/215/GCA_000985215.1_PA042	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88005	32.6	-	CFOU01	49	3028	2895	3/15/15	3/5/17	Contig	SC	SAMEA1324666	GCA_001352595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/595/GCA_001352595.1_7748_4_39	-	USFL038
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92346	32.6	-	CHEQ01	32	3088	2957	4/21/15	3/5/17	Contig	SC	SAMEA1324667	GCA_001352615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/615/GCA_001352615.1_7738_3_91	-	USFL277
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5633	282275	Proteobacteria	Gammaproteobacteria	4.63075	52.1	-	CCLK01	3	4717	4341	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639119	GCA_000985235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/235/GCA_000985235.1_PA090	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.31315	50.2	-	NLMT01	407	5711	5248	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440398	GCA_002228995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/228/995/GCA_002228995.1_ASM222899v1	-	MOD1-EC5524
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36914	65.6	-	FQAB01	57	4260	4080	11/23/16	3/14/17	Scaffold	SC	SAMEA2682877	GCA_900123865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/865/GCA_900123865.1_14893_2_2	-	2926STDY5723629
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.03503	39.6	-	CHQA01	97	2237	2043	4/21/15	3/11/17	Scaffold	SC	SAMEA1024540	GCA_001336915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/915/GCA_001336915.1_6714_7_22	-	9V
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.2641	39.7	-	CHRB01	63	2469	2225	4/21/15	3/11/17	Scaffold	SC	SAMEA1024545	GCA_001336955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/955/GCA_001336955.1_6730_3_4	-	SMRU604
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37003	65.6	-	FQAD01	71	4264	4096	11/23/16	3/14/17	Scaffold	SC	SAMEA2682901	GCA_900123875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/875/GCA_900123875.1_14893_2_22	-	2926STDY5723653
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.05914	50.7	-	NLLY01	195	5238	4900	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440389	GCA_002229015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/015/GCA_002229015.1_ASM222901v1	-	MOD1-EC5547
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5681	282322	Proteobacteria	Gammaproteobacteria	4.60939	52.2	-	CCSS01	2	4699	4331	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633625	GCA_000985255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/255/GCA_000985255.1_PA138	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.83114	32.6	-	CFPN01	34	2965	2845	3/15/15	3/5/17	Contig	SC	SAMEA1324670	GCA_001352635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/635/GCA_001352635.1_7748_4_81	-	USFL079
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87454	32.6	-	CFOF01	49	3028	2902	3/15/15	3/5/17	Contig	SC	SAMEA1324672	GCA_001352655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/655/GCA_001352655.1_7748_4_66	-	USFL065
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5690	282331	Proteobacteria	Gammaproteobacteria	4.51837	52.2	-	CCSO01	1	4589	4227	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633604	GCA_000985275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/275/GCA_000985275.1_PA148	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.11459	50.5	-	NLMS01	172	5322	4981	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440397	GCA_002229025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/025/GCA_002229025.1_ASM222902v1	-	MOD1-EC5525
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37859	65.6	-	FQAE01	65	4276	4105	11/23/16	3/14/17	Scaffold	SC	SAMEA2682899	GCA_900123885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/885/GCA_900123885.1_14893_2_20	-	2926STDY5723651
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.02999	39.6	-	CFCX01	91	2217	1987	3/15/15	3/11/17	Scaffold	SC	SAMEA1024555	GCA_001336975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/975/GCA_001336975.1_6730_6_21	-	SMRU693
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.15662	39.5	-	CFFE01	51	2404	2147	3/15/15	3/11/17	Scaffold	SC	SAMEA1024559	GCA_001337015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/015/GCA_001337015.1_6680_5_19	-	SMRU931
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36123	65.6	-	FQAF01	79	4265	4074	11/23/16	3/14/17	Scaffold	SC	SAMEA2682905	GCA_900123895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/895/GCA_900123895.1_14893_2_25	-	2926STDY5723657
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.85905	50.5	-	NLMO01	232	5097	4599	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440393	GCA_002229045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/045/GCA_002229045.1_ASM222904v1	-	MOD1-EC5529
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5578	282221	Proteobacteria	Gammaproteobacteria	4.61349	52.2	-	CCUT01	2	4727	4346	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639713	GCA_000985295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/295/GCA_000985295.1_PA034	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.91186	32.6	-	CGEA01	37	3054	2922	3/15/15	3/5/17	Contig	SC	SAMEA1324679	GCA_001352675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/675/GCA_001352675.1_7738_3_23	-	USFL210
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.8917	32.7	-	CFPD01	33	3060	2934	3/15/15	3/5/17	Contig	SC	SAMEA1324682	GCA_001352695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/695/GCA_001352695.1_7738_3_50	-	USFL237
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5631	282273	Proteobacteria	Gammaproteobacteria	4.61662	52.2	-	CCTQ01	2	4714	4352	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639214	GCA_000985315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/315/GCA_000985315.1_PA088	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.07955	50.6	-	NLLZ01	166	5419	5018	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452865	GCA_002229075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/075/GCA_002229075.1_ASM222907v1	-	MOD1-EC5545
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36055	65.6	-	FQAH01	65	4256	4069	11/23/16	3/14/17	Scaffold	SC	SAMEA2682907	GCA_900123905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/905/GCA_900123905.1_14893_2_26	-	2926STDY5723659
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10901	39.5	-	CHRH01	69	2310	2079	4/21/15	3/11/17	Scaffold	SC	SAMEA1024561	GCA_001337035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/035/GCA_001337035.1_6730_7_15	-	SMRU711
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.03536	39.7	-	CHQI01	88	2187	1962	4/21/15	3/11/17	Scaffold	SC	SAMEA1024562	GCA_001337055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/055/GCA_001337055.1_6730_5_22	-	SMRU670
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36793	65.6	-	FQAG01	77	4277	4087	11/23/16	3/14/17	Scaffold	SC	SAMEA2682908	GCA_900123915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/915/GCA_900123915.1_14893_2_27	-	2926STDY5723660
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.07955	50.2	-	NLMP01	173	5277	4884	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440394	GCA_002229085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/085/GCA_002229085.1_ASM222908v1	-	MOD1-EC5528
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5562	282205	Proteobacteria	Gammaproteobacteria	4.5821	52.2	-	CCVC01	1	4655	4286	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2646069	GCA_000985335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/335/GCA_000985335.1_PA018	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.85244	32.6	-	CIGI01	40	3000	2875	4/21/15	3/5/17	Contig	SC	SAMEA1324683	GCA_001352715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/715/GCA_001352715.1_7748_4_68	-	USFL067
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.9069	32.6	-	CFJO01	27	3049	2919	3/15/15	3/5/17	Contig	SC	SAMEA1324692	GCA_001352735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/735/GCA_001352735.1_7738_4_41	-	USFL322
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5560	282203	Proteobacteria	Gammaproteobacteria	4.51235	52.2	-	CCVE01	2	4560	4202	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2646071	GCA_000985355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/355/GCA_000985355.1_PA016	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.92105	50.5	-	NLMH01	120	5172	4799	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452876	GCA_002229115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/115/GCA_002229115.1_ASM222911v1	-	MOD1-EC5537
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.38326	65.6	-	FQSU01	84	4306	4116	11/30/16	3/14/17	Scaffold	SC	SAMEA2682909	GCA_900123925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/925/GCA_900123925.1_14893_2_28	-	2926STDY5723661
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10249	39.6	-	CHRI01	60	2354	2100	4/21/15	3/11/17	Scaffold	SC	SAMEA1024563	GCA_001337075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/075/GCA_001337075.1_6730_3_16	-	SMRU616
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.0949	39.7	-	CFBW01	70	2315	2106	3/15/15	3/11/17	Scaffold	SC	SAMEA1024564	GCA_001337095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/095/GCA_001337095.1_6775_1_13	-	SMRU829
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.38202	65.6	-	FQAI01	66	4271	4098	11/23/16	3/14/17	Scaffold	SC	SAMEA2682912	GCA_900123935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/935/GCA_900123935.1_14893_2_30	-	2926STDY5723664
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.00512	50.8	-	NLMI01	155	5206	4867	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452877	GCA_002229125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/125/GCA_002229125.1_ASM222912v1	-	MOD1-EC5536
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5664	282305	Proteobacteria	Gammaproteobacteria	4.57757	52.2	-	CCTG01	2	4657	4289	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633643	GCA_000985375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/375/GCA_000985375.1_PA121	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.96041	32.7	-	CFPL01	50	3162	3023	3/15/15	3/5/17	Contig	SC	SAMEA1324694	GCA_001352755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/755/GCA_001352755.1_7738_3_54	-	USFL241
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.91947	32.6	-	CGEB01	48	3088	2954	3/15/15	3/5/17	Contig	SC	SAMEA1324696	GCA_001352775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/775/GCA_001352775.1_7748_4_78	-	USFL076
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5692	282333	Proteobacteria	Gammaproteobacteria	4.53564	52.2	-	CCSL01	2	4605	4230	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633137	GCA_000985395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/395/GCA_000985395.1_PA058	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.69824	50.6	-	NLNA01	197	4938	4625	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440405	GCA_002229155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/155/GCA_002229155.1_ASM222915v1	-	MOD1-EC5516
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.31175	64.8	-	FQAK01	277	4632	3706	11/23/16	3/14/17	Scaffold	SC	SAMEA2682913	GCA_900123945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/945/GCA_900123945.1_14893_2_31	-	2926STDY5723665
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.13559	39.6	-	CHRQ01	99	2316	2033	4/21/15	3/11/17	Scaffold	SC	SAMEA1024565	GCA_001337115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/115/GCA_001337115.1_6730_7_19	-	SMRU715
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10449	39.7	-	CHRO01	49	2286	2022	4/21/15	3/11/17	Scaffold	SC	SAMEA1024570	GCA_001337135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/135/GCA_001337135.1_6730_6_22	-	SMRU694
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36871	65.5	-	FQAJ01	80	4280	4082	11/23/16	3/14/17	Scaffold	SC	SAMEA2682914	GCA_900123955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/955/GCA_900123955.1_14893_2_32	-	2926STDY5723666
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.91451	50.6	-	NLMJ01	222	5239	4808	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452829	GCA_002229165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/165/GCA_002229165.1_ASM222916v1	-	MOD1-EC5535
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5565	282208	Proteobacteria	Gammaproteobacteria	4.56505	52.1	-	CCVB01	13	4652	4278	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2646066	GCA_000985415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/415/GCA_000985415.1_PA021	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.90691	32.6	-	CFPY01	24	3056	2926	3/15/15	3/5/17	Contig	SC	SAMEA1324698	GCA_001352795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/795/GCA_001352795.1_7738_4_12	-	USFL294
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.9219	32.6	-	CFJN01	51	3091	2955	3/15/15	3/5/17	Contig	SC	SAMEA1324700	GCA_001352815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/815/GCA_001352815.1_7748_4_69	-	USFL068
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5614	282257	Proteobacteria	Gammaproteobacteria	4.57864	52.2	-	CCUA01	1	4647	4281	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639579	GCA_000985435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/435/GCA_000985435.1_PA072	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.02886	50.5	-	NLND01	138	5125	4839	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440406	GCA_002229195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/195/GCA_002229195.1_ASM222919v1	-	MOD1-EC5513
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3674	65.6	-	FQAL01	83	4267	4077	11/23/16	3/14/17	Scaffold	SC	SAMEA2682915	GCA_900123965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/965/GCA_900123965.1_14893_2_33	-	2926STDY5723667
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.0936	39.6	-	CHTW01	114	2293	2047	4/21/15	3/11/17	Scaffold	SC	SAMEA1024573	GCA_001337155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/155/GCA_001337155.1_6775_2_10	-	SMRU850
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.05144	39.6	-	CHQW01	89	2232	1980	4/21/15	3/11/17	Scaffold	SC	SAMEA1024574	GCA_001337175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/175/GCA_001337175.1_6730_3_6	-	SMRU606
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36722	65.6	-	FQAM01	75	4274	4087	11/23/16	3/14/17	Scaffold	SC	SAMEA2682916	GCA_900123975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/975/GCA_900123975.1_14893_2_34	-	2926STDY5723668
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.90408	50.7	-	NLOQ01	144	5102	4800	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440344	GCA_002229215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/215/GCA_002229215.1_ASM222921v1	-	MOD1-EC5471
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5594	282237	Proteobacteria	Gammaproteobacteria	4.58586	52.1	-	CCNX01	2	4668	4302	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639639	GCA_000985455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/455/GCA_000985455.1_PA050	25092320	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.89783	32.7	-	CIGD01	27	3059	2941	4/21/15	3/5/17	Contig	SC	SAMEA1324702	GCA_001352835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/835/GCA_001352835.1_7738_3_69	-	USFL256
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92137	32.6	-	CIFT01	35	3090	2963	4/21/15	3/5/17	Contig	SC	SAMEA1324704	GCA_001352855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/855/GCA_001352855.1_7738_4_42	-	USFL323
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5668	282309	Proteobacteria	Gammaproteobacteria	4.54392	52.2	-	CCSZ01	6	4627	4275	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633639	GCA_000985475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/475/GCA_000985475.1_PA125	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.9951	50.5	-	NLMK01	237	5282	4823	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452830	GCA_002229235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/235/GCA_002229235.1_ASM222923v1	-	MOD1-EC5534
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36857	65.6	-	FQAN01	134	4295	4069	11/23/16	3/14/17	Scaffold	SC	SAMEA2682918	GCA_900123985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/985/GCA_900123985.1_14893_2_35	-	2926STDY5723670
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14479	39.5	-	CHQR01	94	2387	2127	4/21/15	3/11/17	Scaffold	SC	SAMEA1024578	GCA_001337195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/195/GCA_001337195.1_6730_8_9	-	SMRU729
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.23397	39.6	-	CGXG01	73	2488	2228	4/21/15	3/11/17	Scaffold	SC	SAMEA1024579	GCA_001337215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/215/GCA_001337215.1_6755_4_24	-	SMRU1152
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35726	65.6	-	FQAO01	66	4246	4075	11/23/16	3/14/17	Scaffold	SC	SAMEA2682921	GCA_900123995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/123/995/GCA_900123995.1_14893_2_36	-	2926STDY5723673
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.35015	50.3	-	NLNR01	246	5632	5229	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440355	GCA_002229245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/245/GCA_002229245.1_ASM222924v1	-	MOD1-EC5499
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5550	282193	Proteobacteria	Gammaproteobacteria	4.52647	52.2	-	CCTD01	8	4595	4243	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2646093	GCA_000985495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/495/GCA_000985495.1_PA006	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87961	32.6	-	CFQB01	32	3022	2894	3/15/15	3/5/17	Contig	SC	SAMEA1324707	GCA_001352875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/875/GCA_001352875.1_7748_4_26	-	USFL025
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92423	32.6	-	CFPQ01	37	3091	2965	3/15/15	3/5/17	Contig	SC	SAMEA1324709	GCA_001352895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/895/GCA_001352895.1_7738_4_1	-	USFL283
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5640	282282	Proteobacteria	Gammaproteobacteria	4.60207	52.2	-	CCVI01	3	4686	4325	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2638708	GCA_000985515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/515/GCA_000985515.1_PA097	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.69779	50.8	-	NLML01	69	4800	4528	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05464526	GCA_002229265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/265/GCA_002229265.1_ASM222926v1	-	MOD1-EC5533
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.34719	65.6	-	FQAP01	75	4272	4077	11/23/16	3/14/17	Scaffold	SC	SAMEA2682922	GCA_900124005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/005/GCA_900124005.1_14893_2_37	-	2926STDY5723674
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12247	39.6	-	CHQE01	63	2357	2124	4/21/15	3/11/17	Scaffold	SC	SAMEA1024584	GCA_001337235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/235/GCA_001337235.1_6730_5_24	-	SMRU672
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07127	39.5	-	CHTL01	61	2276	2049	4/21/15	3/11/17	Scaffold	SC	SAMEA1024585	GCA_001337255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/255/GCA_001337255.1_6755_4_15	-	SMRU1143
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32599	65.6	-	FQAQ01	88	4253	4066	11/23/16	3/14/17	Scaffold	SC	SAMEA2682923	GCA_900124015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/015/GCA_900124015.1_14893_2_38	-	2926STDY5723675
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.06858	50.6	-	NLMM01	193	5256	4937	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440391	GCA_002229295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/295/GCA_002229295.1_ASM222929v1	-	MOD1-EC5532
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5590	282233	Proteobacteria	Gammaproteobacteria	4.56984	52.1	-	CCUK01	2	4640	4266	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639643	GCA_000985535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/535/GCA_000985535.1_PA046	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88137	32.6	-	CFPZ01	32	3027	2901	3/15/15	3/5/17	Contig	SC	SAMEA1324714	GCA_001352915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/915/GCA_001352915.1_7738_4_67	-	USFL348
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.8803	32.6	-	CIAG01	29	3023	2900	4/21/15	3/5/17	Contig	SC	SAMEA1324715	GCA_001352935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/935/GCA_001352935.1_7738_4_17	-	USFL299
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5617	282260	Proteobacteria	Gammaproteobacteria	4.56671	52.1	-	CCTX01	3	4654	4290	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639576	GCA_000985555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/555/GCA_000985555.1_PA075	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.88194	50.8	-	NLNB01	99	5112	4793	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05464527	GCA_002229315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/315/GCA_002229315.1_ASM222931v1	-	MOD1-EC5515
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36291	65.6	-	FQAR01	80	4262	4076	11/23/16	3/14/17	Scaffold	SC	SAMEA2682924	GCA_900124025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/025/GCA_900124025.1_14893_2_39	-	2926STDY5723676
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.03876	39.7	-	CHQF01	105	2236	2028	4/21/15	3/11/17	Scaffold	SC	SAMEA1024586	GCA_001337275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/275/GCA_001337275.1_6730_7_18	-	SMRU714
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07933	39.7	-	CVLP01	116	2265	2070	4/9/15	3/14/17	Scaffold	SC	SAMEA1024588	GCA_001337295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/295/GCA_001337295.1_6731_2_10	-	SMRU1018
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35944	65.6	-	FQAS01	65	4262	4081	11/23/16	3/14/17	Scaffold	SC	SAMEA2682880	GCA_900124035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/035/GCA_900124035.1_14893_2_4	-	2926STDY5723632
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.98553	50.7	-	NLMU01	244	5237	4901	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440399	GCA_002229325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/325/GCA_002229325.1_ASM222932v1	-	MOD1-EC5522
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5551	282194	Proteobacteria	Gammaproteobacteria	4.56941	52.2	-	CCTF01	1	4640	4272	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2646092	GCA_000985575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/575/GCA_000985575.1_PA007	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.89939	32.6	-	CIAT01	59	3039	2907	4/21/15	3/5/17	Contig	SC	SAMEA1324723	GCA_001352955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/955/GCA_001352955.1_7748_4_12	-	USFL012
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92597	32.6	-	CGDM01	32	3097	2968	3/15/15	3/5/17	Contig	SC	SAMEA1324726	GCA_001352975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/975/GCA_001352975.1_7738_3_49	-	USFL236
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5584	282227	Proteobacteria	Gammaproteobacteria	4.59941	52.1	-	CCUQ01	3	4690	4316	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639688	GCA_000985595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/595/GCA_000985595.1_PA040	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.29398	50.4	-	NLMN01	219	5408	5041	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440392	GCA_002229335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/335/GCA_002229335.1_ASM222933v1	-	MOD1-EC5530
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36328	65.6	-	FQAT01	67	4262	4080	11/23/16	3/14/17	Scaffold	SC	SAMEA2682925	GCA_900124045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/045/GCA_900124045.1_14893_2_40	-	2926STDY5723677
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08795	39.6	-	CHRF01	52	2296	2054	4/21/15	3/11/17	Scaffold	SC	SAMEA1024589	GCA_001337315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/315/GCA_001337315.1_6730_6_12	-	SMRU684
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.18297	39.6	-	CHQL01	104	2381	2117	4/21/15	3/11/17	Scaffold	SC	SAMEA1024592	GCA_001337335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/335/GCA_001337335.1_6730_7_17	-	SMRU713
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36793	65.6	-	FQAV01	59	4281	4087	11/23/16	3/14/17	Scaffold	SC	SAMEA2682927	GCA_900124055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/055/GCA_900124055.1_14893_2_41	-	2926STDY5723679
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.20693	50.5	-	NLNQ01	262	5531	5092	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440354	GCA_002229375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/375/GCA_002229375.1_ASM222937v1	-	MOD1-EC5500
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5641	282283	Proteobacteria	Gammaproteobacteria	4.55977	52.2	-	CCMF01	1	4644	4272	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2638658	GCA_000985615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/615/GCA_000985615.1_PA098	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.9061	32.7	-	CIGN01	48	3066	2937	4/21/15	3/5/17	Contig	SC	SAMEA1324728	GCA_001352995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/995/GCA_001352995.1_7748_4_35	-	USFL034
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88458	32.6	-	CFPW01	54	3027	2892	3/15/15	3/5/17	Contig	SC	SAMEA1324729	GCA_001353015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/015/GCA_001353015.1_7738_3_77	-	USFL263
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5615	282258	Proteobacteria	Gammaproteobacteria	4.56486	52.2	-	CCTY01	1	4649	4289	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639578	GCA_000985655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/655/GCA_000985655.1_PA073	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.18727	50.5	-	NLNE01	231	5288	4945	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440407	GCA_002229385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/385/GCA_002229385.1_ASM222938v1	-	MOD1-EC5512
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37019	65.6	-	FQAU01	63	4276	4098	11/23/16	3/14/17	Scaffold	SC	SAMEA2682929	GCA_900124065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/065/GCA_900124065.1_14893_2_43	-	2926STDY5723681
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.03974	39.7	-	CIHJ01	44	2240	2006	4/21/15	3/11/17	Scaffold	SC	SAMEA1024604	GCA_001337355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/355/GCA_001337355.1_6730_1_13	-	SMRU589
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.15167	39.5	-	CICC01	59	2397	2161	4/21/15	3/11/17	Scaffold	SC	SAMEA1024613	GCA_001337395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/395/GCA_001337395.1_6730_7_21	-	SMRU717
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36863	65.6	-	FQAW01	66	4266	4078	11/23/16	3/14/17	Scaffold	SC	SAMEA2682930	GCA_900124075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/075/GCA_900124075.1_14893_2_44	-	2926STDY5723682
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.09633	50.5	-	NLMV01	352	5399	4935	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440400	GCA_002229415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/415/GCA_002229415.1_ASM222941v1	-	MOD1-EC5521
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5666	282307	Proteobacteria	Gammaproteobacteria	4.56643	52.2	-	CCKV01	4	4648	4294	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633641	GCA_000985675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/675/GCA_000985675.1_PA123	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87995	32.6	-	CHEN01	30	3022	2895	4/21/15	3/5/17	Contig	SC	SAMEA1324730	GCA_001353035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/035/GCA_001353035.1_7738_4_68	-	USFL349
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92196	32.6	-	CFPV01	34	3092	2957	3/15/15	3/5/17	Contig	SC	SAMEA1324731	GCA_001353055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/055/GCA_001353055.1_7738_4_35	-	USFL316
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5624	282267	Proteobacteria	Gammaproteobacteria	4.57396	52.2	-	CCTV01	1	4649	4271	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639572	GCA_000985695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/695/GCA_000985695.1_PA082	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.13031	50.6	-	NLMW01	295	5473	5018	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440401	GCA_002229425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/425/GCA_002229425.1_ASM222942v1	-	MOD1-EC5520
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36707	65.6	-	FQAX01	70	4276	4074	11/23/16	3/14/17	Scaffold	SC	SAMEA2682931	GCA_900124085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/085/GCA_900124085.1_14893_2_45	-	2926STDY5723683
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12112	39.6	-	CHTI01	44	2311	2073	4/21/15	3/11/17	Scaffold	SC	SAMEA1024624	GCA_001337455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/455/GCA_001337455.1_6755_4_17	-	SMRU1145
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.33458	39.5	-	CHPO01	70	2573	2295	4/21/15	3/11/17	Scaffold	SC	SAMEA1024627	GCA_001337475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/475/GCA_001337475.1_6730_1_1	-	SMRU577
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35678	65.6	-	FQAY01	63	4254	4071	11/23/16	3/14/17	Scaffold	SC	SAMEA2682933	GCA_900124095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/095/GCA_900124095.1_14893_2_46	-	2926STDY5723685
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.52944	50.4	-	NLNN01	457	6017	5550	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05464532	GCA_002229455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/455/GCA_002229455.1_ASM222945v1	-	MOD1-EC5503
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5576	282219	Proteobacteria	Gammaproteobacteria	4.57763	52.2	-	CCVK01	3	4653	4292	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2645827	GCA_000985715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/715/GCA_000985715.1_PA032	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.89822	32.6	-	CIAM01	35	3046	2912	4/21/15	3/5/17	Contig	SC	SAMEA1324732	GCA_001353075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/075/GCA_001353075.1_7738_4_18	-	USFL300
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92419	32.6	-	CGGT01	34	3093	2963	3/15/15	3/5/17	Contig	SC	SAMEA1324734	GCA_001353095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/095/GCA_001353095.1_7738_3_57	-	USFL244
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5647	282289	Proteobacteria	Gammaproteobacteria	4.54547	52.2	-	CCMB01	2	4613	4239	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2638334	GCA_000985735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/735/GCA_000985735.1_PA104	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.93578	50.6	-	NLMX01	211	5165	4797	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440402	GCA_002229465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/465/GCA_002229465.1_ASM222946v1	-	MOD1-EC5519
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32493	65.6	-	FQAZ01	61	4249	4069	11/23/16	3/14/17	Scaffold	SC	SAMEA2682935	GCA_900124105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/105/GCA_900124105.1_14893_2_48	-	2926STDY5723687
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10424	39.6	-	CHRV01	69	2347	2112	4/21/15	3/11/17	Scaffold	SC	SAMEA1024630	GCA_001337495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/495/GCA_001337495.1_6730_7_20	-	SMRU716
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08317	39.7	-	CFBQ01	62	2304	2084	3/15/15	3/11/17	Scaffold	SC	SAMEA1024642	GCA_001337575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/575/GCA_001337575.1_6730_3_1	-	SMRU601
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3708	65.6	-	FQBA01	65	4272	4091	11/23/16	3/14/17	Scaffold	SC	SAMEA2682934	GCA_900124115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/115/GCA_900124115.1_14893_2_47	-	2926STDY5723686
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.06426	50.6	-	NLMY01	251	5341	4941	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440403	GCA_002229505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/505/GCA_002229505.1_ASM222950v1	-	MOD1-EC5518
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5663	282304	Proteobacteria	Gammaproteobacteria	4.43221	52.2	-	CCLH01	2	4506	4154	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2637232	GCA_000985755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/755/GCA_000985755.1_PA120	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.91974	32.6	-	CHEL01	59	3097	2957	4/21/15	3/5/17	Contig	SC	SAMEA1324736	GCA_001353115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/115/GCA_001353115.1_7748_4_62	-	USFL061
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92283	32.6	-	CFQI01	40	3088	2957	3/15/15	3/5/17	Contig	SC	SAMEA1324740	GCA_001353135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/135/GCA_001353135.1_7738_3_28	-	USFL215
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5686	282327	Proteobacteria	Gammaproteobacteria	4.59374	52.2	-	CCSQ01	2	4681	4309	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633620	GCA_000985775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/775/GCA_000985775.1_PA144	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.14341	50.6	-	NLMZ01	341	5504	4993	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440404	GCA_002229535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/535/GCA_002229535.1_ASM222953v1	-	MOD1-EC5517
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36866	65.6	-	FQBC01	73	4276	4087	11/23/16	3/14/17	Scaffold	SC	SAMEA2682936	GCA_900124125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/125/GCA_900124125.1_14893_2_49	-	2926STDY5723688
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.17279	39.5	-	CVLQ01	79	2413	2161	4/9/15	3/11/17	Scaffold	SC	SAMEA1024646	GCA_001337615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/615/GCA_001337615.1_6731_2_21	-	SMRU1029
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.02608	39.6	-	CHTF01	80	2233	2016	4/21/15	3/11/17	Scaffold	SC	SAMEA1024648	GCA_001337635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/635/GCA_001337635.1_6755_2_23	-	SMRU815
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.39698	65.6	-	FQBB01	87	4308	4090	11/23/16	3/14/17	Scaffold	SC	SAMEA2682881	GCA_900124135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/135/GCA_900124135.1_14893_2_5	-	2926STDY5723633
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.6901	50.5	-	NLNF01	102	4832	4528	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440408	GCA_002229575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/575/GCA_002229575.1_ASM222957v1	-	MOD1-EC5511
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5661	282302	Proteobacteria	Gammaproteobacteria	4.62609	52.1	-	CCTH01	5	4719	4349	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2637234	GCA_000985795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/795/GCA_000985795.1_PA117	-	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.74023	32.7	-	CHKQ01	34	2842	2731	4/21/15	3/5/17	Contig	SC	SAMEA1324742	GCA_001353155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/155/GCA_001353155.1_7738_4_65	-	USFL346
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.82167	32.6	-	CFQN01	29	2962	2847	3/15/15	3/5/17	Contig	SC	SAMEA1324744	GCA_001353175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/175/GCA_001353175.1_7738_3_60	-	USFL247
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5693	282334	Proteobacteria	Gammaproteobacteria	4.57148	52.2	-	CCSK01	1	4644	4277	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633136	GCA_000985815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/815/GCA_000985815.1_PA061	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.75815	50.4	-	NLNG01	116	4953	4598	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440409	GCA_002229595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/595/GCA_002229595.1_ASM222959v1	-	MOD1-EC5510
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32181	65.6	-	FQBE01	65	4244	4064	11/23/16	3/14/17	Scaffold	SC	SAMEA2682937	GCA_900124145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/145/GCA_900124145.1_14893_2_50	-	2926STDY5723689
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11721	39.4	-	CGXQ01	62	2309	2087	4/21/15	3/11/17	Scaffold	SC	SAMEA1024660	GCA_001337675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/675/GCA_001337675.1_6775_2_15	-	SMRU855
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12468	39.8	-	CHRK01	75	2320	2101	4/21/15	3/11/17	Scaffold	SC	SAMEA1024663	GCA_001337695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/695/GCA_001337695.1_6730_7_9	-	SMRU705
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.38316	65.6	-	FQBD01	64	4275	4109	11/23/16	3/14/17	Scaffold	SC	SAMEA2682938	GCA_900124155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/155/GCA_900124155.1_14893_2_51	-	2926STDY5723690
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.1202	50.6	-	NLOO01	328	5425	5030	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440343	GCA_002229605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/605/GCA_002229605.1_ASM222960v1	-	MOD1-EC5473
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5599	282242	Proteobacteria	Gammaproteobacteria	4.77708	52	-	CCNW01	13	4878	4496	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2639634	GCA_000985835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/835/GCA_000985835.1_PA055	25092320	-
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.83737	32.6	-	CFOZ01	35	2959	2831	3/15/15	3/5/17	Contig	SC	SAMEA1324746	GCA_001353195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/195/GCA_001353195.1_7738_4_37	-	USFL318
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87855	32.6	-	CFON01	28	3015	2888	3/15/15	3/5/17	Contig	SC	SAMEA1324751	GCA_001353215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/215/GCA_001353215.1_7738_4_3	-	USFL285
Salmonella enterica subsp. enterica serovar Paratyphi A	54388	PRJEB5667	282308	Proteobacteria	Gammaproteobacteria	4.54032	52.2	-	CCTB01	2	4599	4244	4/25/15	2/27/17	Scaffold	UNIVERSITY OF WARWICK	SAMEA2633640	GCA_000985855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/985/855/GCA_000985855.1_PA124	-	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.91869	50.7	-	NLOZ01	89	5045	4764	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440286	GCA_002229615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/615/GCA_002229615.1_ASM222961v1	-	MOD1-EC5459
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36812	65.5	-	FQBF01	66	4267	4091	11/23/16	3/14/17	Scaffold	SC	SAMEA2682940	GCA_900124165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/165/GCA_900124165.1_14893_2_52	-	2926STDY5723692
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.13749	39.5	-	CHRN01	116	2354	2105	4/21/15	3/5/17	Scaffold	SC	SAMEA1024671	GCA_001337735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/735/GCA_001337735.1_6730_6_18	-	SMRU690
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.16222	39.6	-	CFHI01	78	2425	2190	3/15/15	3/5/17	Scaffold	SC	SAMEA1024675	GCA_001337755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/755/GCA_001337755.1_6730_3_19	-	SMRU619
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36828	65.6	-	FQBG01	71	4272	4075	11/23/16	3/14/17	Scaffold	SC	SAMEA2682941	GCA_900124175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/175/GCA_900124175.1_14893_2_53	-	2926STDY5723693
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.06982	50.5	-	NLNH01	195	5387	4991	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440410	GCA_002229625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/625/GCA_002229625.1_ASM222962v1	-	MOD1-EC5509
Salmonella enterica subsp. enterica serovar Derby	28144	PRJNA270707	270707	Proteobacteria	Gammaproteobacteria	4.82079	52.1	-	LAZB01	29	4916	4647	6/26/15	2/27/17	Scaffold	ANSES	SAMN03268412	GCA_001040825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/040/825/GCA_001040825.1_ASM104082v1	26227607	07CR553
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.90443	32.6	-	CFOI01	59	3064	2932	3/15/15	3/5/17	Contig	SC	SAMEA1324752	GCA_001353235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/235/GCA_001353235.1_7748_4_44	-	USFL043
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.8772	32.6	-	CFPX01	45	3023	2894	3/15/15	3/5/17	Contig	SC	SAMEA1324753	GCA_001353255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/255/GCA_001353255.1_7748_4_38	-	USFL037
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.65489	52.2	-	CVQG01	42	4825	4465	5/14/15	2/27/17	Scaffold	SC	SAMEA1930250	GCA_001047895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/895/GCA_001047895.1_10592_2_52	-	Sep-84
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.82005	50.7	-	NLNI01	146	4976	4633	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05464529	GCA_002229675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/675/GCA_002229675.1_ASM222967v1	-	MOD1-EC5508
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35735	65.6	-	FQBI01	95	4284	4066	11/23/16	3/14/17	Scaffold	SC	SAMEA2682942	GCA_900124185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/185/GCA_900124185.1_14893_2_54	-	2926STDY5723694
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.06557	39.7	-	CHQV01	71	2278	2066	4/21/15	3/5/17	Scaffold	SC	SAMEA1024678	GCA_001337775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/775/GCA_001337775.1_6730_7_22	-	SMRU718
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07602	39.8	-	CFLJ01	102	2224	2018	3/15/15	3/5/17	Scaffold	SC	SAMEA1024682	GCA_001337795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/795/GCA_001337795.1_6731_1_15	-	SMRU999
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35333	65.6	-	FQBK01	96	4292	4071	11/23/16	3/14/17	Scaffold	SC	SAMEA2682943	GCA_900124195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/195/GCA_900124195.1_14893_2_55	-	2926STDY5723695
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.30072	50.3	-	NLNJ01	261	5528	5069	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05464530	GCA_002229695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/695/GCA_002229695.1_ASM222969v1	-	MOD1-EC5507
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73342	52.1	-	CVQN01	43	4928	4562	5/14/15	2/27/17	Scaffold	SC	SAMEA1930257	GCA_001047915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/915/GCA_001047915.1_10593_2_12	-	Sep-92
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87819	32.6	-	CHEV01	55	3019	2886	4/21/15	3/5/17	Contig	SC	SAMEA1324754	GCA_001353275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/275/GCA_001353275.1_7748_4_84	-	USFL082
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87941	32.6	-	CFOS01	31	3021	2894	3/15/15	3/5/17	Contig	SC	SAMEA1324760	GCA_001353295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/295/GCA_001353295.1_7738_3_9	-	USFL197
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81564	52	-	CVPO01	55	5008	4595	5/14/15	2/27/17	Scaffold	SC	SAMEA1967383	GCA_001047935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/935/GCA_001047935.1_10492_1_52	-	MDUST265
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.82602	50.7	-	NLOC01	160	4959	4710	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440333	GCA_002229705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/705/GCA_002229705.1_ASM222970v1	-	MOD1-EC5486
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32506	65.6	-	FQBH01	77	4253	4059	11/23/16	3/14/17	Scaffold	SC	SAMEA2682947	GCA_900124205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/205/GCA_900124205.1_14893_2_56	-	2926STDY5723699
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.05064	39.6	-	CHUG01	68	2285	2049	4/21/15	3/5/17	Scaffold	SC	SAMEA1024693	GCA_001337835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/835/GCA_001337835.1_6775_1_6	-	SMRU822
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.17064	39.6	-	CHPR01	73	2399	2153	4/21/15	3/5/17	Scaffold	SC	SAMEA1024697	GCA_001337875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/875/GCA_001337875.1_6730_3_22	-	SMRU622
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36347	65.6	-	FQBJ01	70	4271	4078	11/23/16	3/14/17	Scaffold	SC	SAMEA2682950	GCA_900124215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/215/GCA_900124215.1_14893_2_57	-	2926STDY5723702
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.51208	50.9	-	NLNK01	179	4620	4339	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440411	GCA_002229715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/715/GCA_002229715.1_ASM222971v1	-	MOD1-EC5506
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7207	52	-	CVQC01	38	4879	4521	5/14/15	2/27/17	Scaffold	SC	SAMEA2072500	GCA_001047955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/955/GCA_001047955.1_10349_1_22	-	ERL061748
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88723	32.6	-	CGEC01	39	3027	2896	3/15/15	3/5/17	Contig	SC	SAMEA1324764	GCA_001353315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/315/GCA_001353315.1_7738_3_30	-	USFL217
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.91785	32.7	-	CIAQ01	40	3101	2965	4/21/15	3/5/17	Contig	SC	SAMEA1324765	GCA_001353335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/335/GCA_001353335.1_7748_4_23	-	USFL022
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.78436	52.1	-	CVPX01	54	4987	4607	5/14/15	2/27/17	Scaffold	SC	SAMEA2072664	GCA_001047975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/975/GCA_001047975.1_10349_1_70	-	ERL114070
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.85971	50.5	-	NLNL01	120	4986	4728	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05464531	GCA_002229755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/755/GCA_002229755.1_ASM222975v1	-	MOD1-EC5505
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32045	65.6	-	FQBL01	70	4238	4051	11/23/16	3/14/17	Scaffold	SC	SAMEA2682953	GCA_900124225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/225/GCA_900124225.1_14893_2_59	-	2926STDY5723705
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.23618	39.4	-	CFDY01	118	2487	2235	3/15/15	3/5/17	Scaffold	SC	SAMEA1024699	GCA_001337895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/895/GCA_001337895.1_6731_1_14	-	SMRU998
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.09127	39.7	-	CHQB01	63	2306	2091	4/21/15	3/5/17	Scaffold	SC	SAMEA1024700	GCA_001337915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/915/GCA_001337915.1_6730_5_17	-	SMRU665
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.31967	65.6	-	FQBM01	56	4235	4061	11/23/16	3/14/17	Scaffold	SC	SAMEA2682952	GCA_900124235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/235/GCA_900124235.1_14893_2_58	-	2926STDY5723704
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.77058	50.8	-	NLNU01	53	4923	4688	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440347	GCA_002229775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/775/GCA_002229775.1_ASM222977v1	-	MOD1-EC5496
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72797	52	-	CVQD01	50	4875	4527	5/14/15	2/27/17	Scaffold	SC	SAMEA2072673	GCA_001047995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/995/GCA_001047995.1_10349_1_3	-	ERL022464
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.8787	32.6	-	CGGV01	36	3019	2894	3/15/15	3/5/17	Contig	SC	SAMEA1324768	GCA_001353355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/355/GCA_001353355.1_7738_3_80	-	USFL266
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.81929	32.7	-	CIAK01	22	2953	2811	4/21/15	3/5/17	Contig	SC	SAMEA1324769	GCA_001353375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/375/GCA_001353375.1_7738_3_47	-	USFL234
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81183	52	-	CVPK01	69	5021	4648	5/14/15	2/27/17	Scaffold	SC	SAMEA2072810	GCA_001048015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/015/GCA_001048015.1_10349_1_45	-	ERL091788
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.87428	50.6	-	NLNM01	267	5110	4755	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440412	GCA_002229785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/785/GCA_002229785.1_ASM222978v1	-	MOD1-EC5504
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36841	65.6	-	FQBN01	62	4277	4085	11/23/16	3/14/17	Scaffold	SC	SAMEA2682882	GCA_900124245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/245/GCA_900124245.1_14893_2_6	-	2926STDY5723634
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08403	39.7	-	CHQX01	65	2310	2088	4/21/15	3/5/17	Scaffold	SC	SAMEA1024710	GCA_001337935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/935/GCA_001337935.1_6730_1_6	-	SMRU582
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.15134	39.7	-	CFCY01	82	2386	2156	3/15/15	3/5/17	Scaffold	SC	SAMEA1024723	GCA_001337955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/955/GCA_001337955.1_6730_8_22	-	SMRU742
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37782	65.6	-	FQBO01	71	4289	4103	11/23/16	3/14/17	Scaffold	SC	SAMEA2682954	GCA_900124255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/255/GCA_900124255.1_14893_2_60	-	2926STDY5723706
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.1002	50.6	-	NLNT01	223	5383	5008	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440346	GCA_002229795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/795/GCA_002229795.1_ASM222979v1	-	MOD1-EC5497
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73356	52	-	CVPP01	53	4887	4530	5/14/15	2/27/17	Scaffold	SC	SAMEA2142391	GCA_001048055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/055/GCA_001048055.1_10492_1_84	-	MDUST411
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87998	32.6	-	CGDY01	38	3022	2900	3/15/15	3/5/17	Contig	SC	SAMEA1324771	GCA_001353395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/395/GCA_001353395.1_7748_4_43	-	USFL042
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.89837	32.7	-	CFLK01	19	3042	2902	3/15/15	3/5/17	Contig	SC	SAMEA1466448	GCA_001353415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/415/GCA_001353415.1_9669_1_2	-	USFL110
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.78228	52.1	-	CVQA01	69	4982	4618	5/14/15	2/27/17	Scaffold	SC	SAMEA2142508	GCA_001048075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/075/GCA_001048075.1_10493_1_11	-	MDUST131
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.21781	50.6	-	NLNV01	284	5422	5057	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05464533	GCA_002229815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/815/GCA_002229815.1_ASM222981v1	-	MOD1-EC5494
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32346	65.6	-	FQBQ01	69	4248	4063	11/23/16	3/14/17	Scaffold	SC	SAMEA2682955	GCA_900124265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/265/GCA_900124265.1_14893_2_61	-	2926STDY5723707
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.06795	39.6	-	CHPV01	58	2263	2012	4/21/15	3/15/17	Scaffold	SC	SAMEA1024734	GCA_001337995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/995/GCA_001337995.1_6730_5_4	-	SMRU652
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.0458	39.6	-	CHGU01	68	2251	2023	4/21/15	3/5/17	Scaffold	SC	SAMEA1024737	GCA_001338035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/035/GCA_001338035.1_6680_6_4	-	SMRU940
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3565	65.6	-	FQBP01	68	4255	4075	11/23/16	3/14/17	Scaffold	SC	SAMEA2682956	GCA_900124275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/275/GCA_900124275.1_14893_2_62	-	2926STDY5723708
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.8258	50.5	-	NLOA01	187	5028	4668	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440331	GCA_002229855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/855/GCA_002229855.1_ASM222985v1	-	MOD1-EC5488
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74648	52.1	-	CVPQ01	60	4924	4540	5/14/15	2/27/17	Scaffold	SC	SAMEA2144465	GCA_001048095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/095/GCA_001048095.1_10493_1_17	-	MDUST152
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87555	32.6	-	CFOO01	48	3026	2892	3/15/15	3/5/17	Contig	SC	SAMEA1466449	GCA_001353435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/435/GCA_001353435.1_7907_4_74	-	USFL166
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87905	32.6	-	CFOV01	48	3033	2898	3/15/15	3/5/17	Contig	SC	SAMEA1466450	GCA_001353455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/455/GCA_001353455.1_7907_4_34	-	USFL127
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72184	52	-	CVPT01	52	4893	4508	5/14/15	2/27/17	Scaffold	SC	SAMEA2144725	GCA_001048115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/115/GCA_001048115.1_10493_1_49	-	MDUST261
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.9687	50.4	-	NLNW01	270	5204	4840	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440349	GCA_002229875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/875/GCA_002229875.1_ASM222987v1	-	MOD1-EC5492
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36538	65.6	-	FQBR01	64	4265	4083	11/23/16	3/14/17	Scaffold	SC	SAMEA2682957	GCA_900124285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/285/GCA_900124285.1_14893_2_63	-	2926STDY5723710
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10522	39.7	-	CHSR01	75	2304	2099	4/21/15	3/5/17	Scaffold	SC	SAMEA1024747	GCA_001338075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/075/GCA_001338075.1_6731_4_10	-	SMRU1066
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14686	39.4	-	CHSI01	84	2343	2120	4/21/15	3/5/17	Scaffold	SC	SAMEA1024748	GCA_001338095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/095/GCA_001338095.1_6731_4_9	-	SMRU1065
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36762	65.6	-	FQBS01	78	4269	4081	11/23/16	3/14/17	Scaffold	SC	SAMEA2682959	GCA_900124295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/295/GCA_900124295.1_14893_2_65	-	2926STDY5723712
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.7084	50.8	-	NLOM01	106	4807	4582	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440341	GCA_002229885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/885/GCA_002229885.1_ASM222988v1	-	MOD1-EC5475
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81285	51.9	-	CVPV01	55	5027	4636	5/14/15	2/27/17	Scaffold	SC	SAMEA2145798	GCA_001048135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/135/GCA_001048135.1_10493_1_63	-	MDUST297
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.78023	32.6	-	CIGG01	28	2906	2794	4/21/15	3/5/17	Contig	SC	SAMEA1466455	GCA_001353475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/475/GCA_001353475.1_7907_4_36	-	USFL129
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92419	32.6	-	CIGF01	42	3093	2959	4/21/15	3/5/17	Contig	SC	SAMEA1466456	GCA_001353495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/495/GCA_001353495.1_7907_4_13	-	USFL107
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.814	51.9	-	CVQF01	59	5008	4629	5/14/15	2/27/17	Scaffold	SC	SAMEA2145926	GCA_001048155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/155/GCA_001048155.1_10561_2_40	-	ERL022368
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.78564	50.7	-	NLNX01	204	5050	4679	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440350	GCA_002229935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/935/GCA_002229935.1_ASM222993v1	-	MOD1-EC5491
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35797	65.6	-	FQBT01	68	4268	4079	11/23/16	3/14/17	Scaffold	SC	SAMEA2682961	GCA_900124305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/305/GCA_900124305.1_14893_2_66	-	2926STDY5723714
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08166	39.5	-	CHQJ01	63	2298	2055	4/21/15	3/15/17	Scaffold	SC	SAMEA1024749	GCA_001338115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/115/GCA_001338115.1_6731_1_12	-	SMRU996
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.06924	39.6	-	CHTV01	44	2276	2015	4/21/15	3/15/17	Scaffold	SC	SAMEA1024752	GCA_001338135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/135/GCA_001338135.1_6775_1_5	-	SMRU821
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36697	65.6	-	FQBU01	62	4261	4089	11/23/16	3/14/17	Scaffold	SC	SAMEA2682962	GCA_900124315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/315/GCA_900124315.1_14893_2_67	-	2926STDY5723715
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.1627	50.7	-	NLOR01	250	5377	5001	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440345	GCA_002229955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/955/GCA_002229955.1_ASM222995v1	-	MOD1-EC5469
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.68276	52.1	-	CVPU01	53	4836	4476	5/14/15	2/27/17	Scaffold	SC	SAMEA2146860	GCA_001048175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/175/GCA_001048175.1_10493_1_50	-	MDUST268
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.89016	32.6	-	CFSL01	50	3036	2916	3/15/15	3/5/17	Contig	SC	SAMEA1466458	GCA_001353515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/515/GCA_001353515.1_7907_4_35	-	USFL128
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87524	32.6	-	CFPO01	33	3016	2889	3/15/15	3/5/17	Contig	SC	SAMEA1466461	GCA_001353535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/535/GCA_001353535.1_7907_4_71	-	USFL163
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.83243	52	-	CVQM01	64	5034	4600	5/14/15	2/27/17	Scaffold	SC	SAMEA2148391	GCA_001048195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/195/GCA_001048195.1_10562_2_18	-	MDUST190
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.73346	50.5	-	NLNY01	91	4878	4565	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440351	GCA_002229965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/965/GCA_002229965.1_ASM222996v1	-	MOD1-EC5490
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36715	65.6	-	FQBV01	76	4262	4069	11/23/16	3/14/17	Scaffold	SC	SAMEA2682965	GCA_900124325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/325/GCA_900124325.1_14893_2_68	-	2926STDY5723718
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10616	39.5	-	CHQZ01	77	2321	2102	4/21/15	3/5/17	Scaffold	SC	SAMEA1024757	GCA_001338195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/195/GCA_001338195.1_6731_6_13	-	SMRU1117
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.05887	39.6	-	CGWH01	65	2237	1996	4/21/15	3/15/17	Scaffold	SC	SAMEA1024758	GCA_001338215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/215/GCA_001338215.1_6680_6_21	-	SMRU957
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36815	65.6	-	FQBW01	78	4279	4085	11/23/16	3/14/17	Scaffold	SC	SAMEA2682967	GCA_900124335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/335/GCA_900124335.1_14893_2_69	-	2926STDY5723720
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.12363	50.6	-	NLNZ01	333	5455	5012	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440330	GCA_002229985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/985/GCA_002229985.1_ASM222998v1	-	MOD1-EC5489
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72444	52	-	CVPL01	60	4897	4508	5/14/15	2/27/17	Scaffold	SC	SAMEA2148657	GCA_001048215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/215/GCA_001048215.1_10492_1_23	-	MDUST187
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87737	32.6	-	CHKN01	58	3039	2900	4/21/15	3/5/17	Contig	SC	SAMEA1466463	GCA_001353555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/555/GCA_001353555.1_7907_4_1	-	USFL095
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.74166	32.7	-	CIAI01	23	2853	2743	4/21/15	3/5/17	Contig	SC	SAMEA1466464	GCA_001353575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/575/GCA_001353575.1_7907_4_29	-	USFL122
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72242	52	-	CVPN01	50	4906	4515	5/14/15	2/27/17	Scaffold	SC	SAMEA2149773	GCA_001048235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/235/GCA_001048235.1_10492_1_33	-	MDUST223
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.93349	50.5	-	NLPD01	155	5130	4809	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440289	GCA_002230015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/015/GCA_002230015.1_ASM223001v1	-	MOD1-EC5453
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36378	65.6	-	FQBX01	61	4270	4088	11/23/16	3/14/17	Scaffold	SC	SAMEA2682883	GCA_900124345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/345/GCA_900124345.1_14893_2_7	-	2926STDY5723635
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.1158	39.5	-	CFBR01	91	2309	2095	3/15/15	3/5/17	Scaffold	SC	SAMEA1024764	GCA_001338235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/235/GCA_001338235.1_6731_4_20	-	SMRU1076
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.16515	39.5	-	CFGQ01	84	2404	2161	3/15/15	3/5/17	Scaffold	SC	SAMEA1024769	GCA_001338255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/255/GCA_001338255.1_6731_5_22	-	SMRU1102
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37345	65.6	-	FQBY01	79	4283	4099	11/23/16	3/14/17	Scaffold	SC	SAMEA2682977	GCA_900124355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/355/GCA_900124355.1_14893_2_70	-	2926STDY5723730
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.20484	50.6	-	NLOS01	191	5433	5080	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05464536	GCA_002230055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/055/GCA_002230055.1_ASM223005v1	-	MOD1-EC5468
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70821	52.1	-	CVQB01	57	4873	4510	5/14/15	2/27/17	Scaffold	SC	SAMEA2150023	GCA_001048255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/255/GCA_001048255.1_10493_1_86	-	MDUST415
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.97061	32.6	-	CGGQ01	38	3141	3003	3/15/15	3/5/17	Contig	SC	SAMEA1466468	GCA_001353595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/595/GCA_001353595.1_7907_4_77	-	USFL169
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87703	32.6	-	CFOW01	38	3019	2894	3/15/15	3/5/17	Contig	SC	SAMEA1466469	GCA_001353615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/615/GCA_001353615.1_7907_4_2	-	USFL096
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81806	52	-	CVPR01	98	4966	4542	5/14/15	2/27/17	Scaffold	SC	SAMEA2150780	GCA_001048275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/275/GCA_001048275.1_10493_1_22	-	MDUST162
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.83427	50.6	-	NLOD01	115	4943	4674	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440334	GCA_002230065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/065/GCA_002230065.1_ASM223006v1	-	MOD1-EC5485
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36778	65.6	-	FQBZ01	59	4271	4090	11/23/16	3/14/17	Scaffold	SC	SAMEA2682981	GCA_900124365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/365/GCA_900124365.1_14893_2_72	-	2926STDY5723734
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	1.99441	39.6	-	CHSP01	50	2191	1968	4/21/15	3/5/17	Scaffold	SC	SAMEA1024776	GCA_001338295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/295/GCA_001338295.1_6731_6_14	-	SMRU1118
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.06273	39.7	-	CHRS01	88	2288	2045	4/21/15	3/11/17	Scaffold	SC	SAMEA1024782	GCA_001338315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/315/GCA_001338315.1_6731_5_23	-	SMRU1103
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36588	65.6	-	FQCB01	65	4262	4073	11/23/16	3/14/17	Scaffold	SC	SAMEA2682982	GCA_900124375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/375/GCA_900124375.1_14893_2_73	-	2926STDY5723735
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.96872	50.7	-	NLPA01	158	5082	4780	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440287	GCA_002230095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/095/GCA_002230095.1_ASM223009v1	-	MOD1-EC5458
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.691	52.1	-	CVPS01	54	4845	4476	5/14/15	2/27/17	Scaffold	SC	SAMEA2151192	GCA_001048295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/295/GCA_001048295.1_10493_1_28	-	MDUST177
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.84773	32.6	-	CFQJ01	50	2964	2827	3/15/15	3/5/17	Contig	SC	SAMEA1466472	GCA_001353635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/635/GCA_001353635.1_7907_4_17	-	USFL111
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87431	32.6	-	CIGJ01	37	3021	2896	4/21/15	3/5/17	Contig	SC	SAMEA1466476	GCA_001353655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/655/GCA_001353655.1_7907_4_76	-	USFL168
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.79793	52.1	-	CVQL01	104	5017	4635	5/14/15	2/27/17	Scaffold	SC	SAMEA2152842	GCA_001048315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/315/GCA_001048315.1_10562_2_17	-	MDUST176
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.80806	50.7	-	NLOE01	87	4919	4664	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440335	GCA_002230105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/105/GCA_002230105.1_ASM223010v1	-	MOD1-EC5484
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36824	65.6	-	FQCA01	64	4277	4074	11/23/16	3/14/17	Scaffold	SC	SAMEA2682983	GCA_900124385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/385/GCA_900124385.1_14893_2_74	-	2926STDY5723736
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10048	39.6	-	CHPT01	67	2270	2019	4/21/15	3/11/17	Scaffold	SC	SAMEA1024783	GCA_001338335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/335/GCA_001338335.1_6730_1_11	-	SMRU587
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14494	39.5	-	CFGW01	62	2397	2130	3/15/15	3/11/17	Scaffold	SC	SAMEA1024786	GCA_001338375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/375/GCA_001338375.1_6731_5_20	-	SMRU1100
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36258	65.6	-	FQCC01	72	4262	4077	11/23/16	3/14/17	Scaffold	SC	SAMEA2682984	GCA_900124395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/395/GCA_900124395.1_14893_2_75	-	2926STDY5723737
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.96835	50.6	-	NLPB01	208	5076	4757	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05464538	GCA_002230145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/145/GCA_002230145.1_ASM223014v1	-	MOD1-EC5456
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93255	51.8	-	CVQE01	68	5120	4733	5/14/15	2/27/17	Scaffold	SC	SAMEA2155919	GCA_001048335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/335/GCA_001048335.1_10492_1_15	-	MDUST151
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87306	32.6	-	CIJS01	41	3017	2887	4/21/15	3/5/17	Contig	SC	SAMEA1466483	GCA_001353675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/675/GCA_001353675.1_7907_4_75	-	USFL167
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.7446	32.7	-	CIKH01	19	2854	2735	4/21/15	3/5/17	Contig	SC	SAMEA1466486	GCA_001353695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/695/GCA_001353695.1_7907_4_95	-	USFL187
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.8156	52.1	-	CVQO01	54	5014	4655	5/14/15	2/27/17	Scaffold	SC	SAMEA2155987	GCA_001048355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/355/GCA_001048355.1_10562_2_35	-	MDUST260
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.91777	50.6	-	NLOF01	101	4877	4635	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440336	GCA_002230175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/175/GCA_002230175.1_ASM223017v1	-	MOD1-EC5483
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36994	65.6	-	FQCD01	56	4261	4081	11/23/16	3/14/17	Scaffold	SC	SAMEA2682985	GCA_900124405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/405/GCA_900124405.1_14893_2_76	-	2926STDY5723738
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14342	39.5	-	CHQO01	114	2363	2131	4/21/15	3/11/17	Scaffold	SC	SAMEA1024788	GCA_001338395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/395/GCA_001338395.1_6730_3_11	-	SMRU611
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07361	39.7	-	CHQS01	59	2283	2066	4/21/15	3/11/17	Scaffold	SC	SAMEA1024796	GCA_001338415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/415/GCA_001338415.1_6730_5_18	-	SMRU666
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36376	65.6	-	FQCE01	60	4263	4080	11/23/16	3/14/17	Scaffold	SC	SAMEA2682987	GCA_900124415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/415/GCA_900124415.1_14893_2_77	-	2926STDY5723740
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.95115	50.5	-	NLOG01	252	5198	4834	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440337	GCA_002230185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/185/GCA_002230185.1_ASM223018v1	-	MOD1-EC5482
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72131	52	-	CVPZ01	53	4877	4510	5/14/15	2/27/17	Scaffold	SC	SAMEA2157600	GCA_001048395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/395/GCA_001048395.1_10541_2_10	-	MDUST181
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92268	32.6	-	CHEK01	36	3089	2963	4/21/15	3/5/17	Contig	SC	SAMEA1466487	GCA_001353715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/715/GCA_001353715.1_7907_4_4	-	USFL098
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87704	32.6	-	CGDW01	34	3020	2894	3/15/15	3/5/17	Contig	SC	SAMEA1466488	GCA_001353735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/735/GCA_001353735.1_7907_4_61	-	USFL154
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82283	52	-	CVPM01	55	5009	4649	5/14/15	2/27/17	Scaffold	SC	SAMEA2158779	GCA_001048415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/415/GCA_001048415.1_10492_1_39	-	MDUST239
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.95976	50.7	-	NLON01	231	5210	4813	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440342	GCA_002230215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/215/GCA_002230215.1_ASM223021v1	-	MOD1-EC5474
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32484	65.6	-	FQCF01	71	4238	4070	11/23/16	3/14/17	Scaffold	SC	SAMEA2682993	GCA_900124425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/425/GCA_900124425.1_14893_2_79	-	2926STDY5723746
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08242	39.6	-	CGWO01	42	2272	2015	4/21/15	3/11/17	Scaffold	SC	SAMEA1024798	GCA_001338435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/435/GCA_001338435.1_6730_1_10	-	SMRU586
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.09291	39.6	-	CHSZ01	65	2290	2038	4/21/15	3/11/17	Scaffold	SC	SAMEA1024800	GCA_001338455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/455/GCA_001338455.1_6731_6_15	-	SMRU1119
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36472	65.6	-	FQCG01	86	4282	4075	11/23/16	3/14/17	Scaffold	SC	SAMEA2682884	GCA_900124435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/435/GCA_900124435.1_14893_2_8	-	2926STDY5723636
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.86657	50.6	-	NLPO01	117	5035	4780	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440297	GCA_002230225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/225/GCA_002230225.1_ASM223022v1	-	MOD1-EC5437
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.75304	52	-	CVQJ01	55	4919	4555	5/14/15	2/27/17	Scaffold	SC	SAMEA2162371	GCA_001048435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/435/GCA_001048435.1_10562_2_10	-	MDUST146
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87675	32.6	-	CFQM01	44	3025	2895	3/15/15	3/5/17	Contig	SC	SAMEA1466489	GCA_001353755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/755/GCA_001353755.1_7907_4_24	-	USFL117
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87931	32.6	-	CIGQ01	31	3024	2896	4/21/15	3/5/17	Contig	SC	SAMEA1466490	GCA_001353775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/775/GCA_001353775.1_7907_4_54	-	USFL147
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7626	51.9	-	CVQK01	60	4924	4551	5/14/15	2/27/17	Scaffold	SC	SAMEA2163130	GCA_001048455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/048/455/GCA_001048455.1_10562_2_14	-	MDUST170
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.81025	50.7	-	NLRC01	135	4979	4679	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279530	GCA_002230255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/255/GCA_002230255.1_ASM223025v1	-	MOD1-EC5191
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.363	65.6	-	FQCH01	75	4269	4085	11/23/16	3/14/17	Scaffold	SC	SAMEA2683000	GCA_900124445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/445/GCA_900124445.1_14893_2_80	-	2926STDY5723753
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08495	39.6	-	CHHD01	67	2296	2085	4/21/15	3/14/17	Scaffold	SC	SAMEA1024807	GCA_001338475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/475/GCA_001338475.1_6731_3_23	-	SMRU1055
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.21406	39.4	-	CHHB01	92	2448	2202	4/21/15	3/11/17	Scaffold	SC	SAMEA1024815	GCA_001338535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/535/GCA_001338535.1_6730_5_19	-	SMRU667
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35578	65.6	-	FQCI01	94	4283	4066	11/23/16	3/14/17	Scaffold	SC	SAMEA2683006	GCA_900124455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/455/GCA_900124455.1_14893_2_81	-	2926STDY5723759
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.25649	50.3	-	NLOH01	217	5516	5151	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440338	GCA_002230265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/265/GCA_002230265.1_ASM223026v1	-	MOD1-EC5481
Salmonella enterica subsp. enterica serovar Agona str. 16.H.08	1265649	PRJEB1079	189733	Proteobacteria	Gammaproteobacteria	4.74374	52	-	CATY01	146	4797	4551	4/26/13	2/27/17	Scaffold	ERI	SAMEA3146252	GCA_001050855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/050/855/GCA_001050855.1_ASM105085v1	23637636	16.H.08
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.84465	32.6	-	CIAR01	35	2984	2865	4/21/15	3/5/17	Contig	SC	SAMEA1466493	GCA_001353795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/795/GCA_001353795.1_7907_4_64	-	USFL157
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.82343	32.7	-	CGDS01	28	2973	2851	3/15/15	3/5/17	Contig	SC	SAMEA1466498	GCA_001353835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/835/GCA_001353835.1_7907_4_63	-	USFL156
Salmonella enterica	28901	PRJNA286978	286978	Proteobacteria	Gammaproteobacteria	5.1316	51.8	-	LFCC01	193	5313	4947	7/15/15	2/21/17	Scaffold	University of Coimbra	SAMN03774870	GCA_001078155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/155/GCA_001078155.1_ASM107815v1	-	Sal25
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.42193	50.3	-	NLQD01	332	5839	5400	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440317	GCA_002230295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/295/GCA_002230295.1_ASM223029v1	-	MOD1-EC5234
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36695	65.6	-	FQCJ01	77	4275	4077	11/23/16	3/14/17	Scaffold	SC	SAMEA2683007	GCA_900124465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/465/GCA_900124465.1_14893_2_82	-	2926STDY5723760
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.09714	39.6	-	CHPX01	119	2282	2036	4/21/15	3/11/17	Scaffold	SC	SAMEA1024819	GCA_001338555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/555/GCA_001338555.1_6714_7_6	-	SMRU750
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.24013	39.5	-	CHOW01	73	2482	2212	4/21/15	3/11/17	Scaffold	SC	SAMEA1024821	GCA_001338575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/575/GCA_001338575.1_6680_7_21	-	SMRU981
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35648	65.6	-	FQCK01	84	4276	4069	11/23/16	3/14/17	Scaffold	SC	SAMEA2683010	GCA_900124475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/475/GCA_900124475.1_14893_2_83	-	2926STDY5723763
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.74529	50.7	-	NLOI01	157	4858	4588	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440339	GCA_002230305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/305/GCA_002230305.1_ASM223030v1	-	MOD1-EC5480
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73681	52	-	CEYU01	60	4891	4531	3/10/15	2/27/17	Scaffold	SC	SAMEA2152265	GCA_001078745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/745/GCA_001078745.1_10492_1_67	-	MDUST362
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87915	32.6	-	CFQG01	52	3023	2893	3/15/15	3/5/17	Contig	SC	SAMEA1466499	GCA_001353855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/855/GCA_001353855.1_7907_4_44	-	USFL137
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.97177	32.6	-	CFPK01	41	3147	3000	3/15/15	3/5/17	Contig	SC	SAMEA1466500	GCA_001353875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/875/GCA_001353875.1_7907_4_82	-	USFL174
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71969	52	-	CEXK01	57	4882	4522	3/11/15	2/27/17	Scaffold	SC	SAMEA2151767	GCA_001078765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/765/GCA_001078765.1_10562_2_46	-	MDUST307
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.81619	50.7	-	NLOJ01	97	4901	4636	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440340	GCA_002230325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/325/GCA_002230325.1_ASM223032v1	-	MOD1-EC5479
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36793	65.6	-	FQCL01	71	4273	4089	11/23/16	3/14/17	Scaffold	SC	SAMEA2683012	GCA_900124485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/485/GCA_900124485.1_14893_2_84	-	2926STDY5723765
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11893	39.5	-	CHRD01	84	2331	2109	4/21/15	3/11/17	Scaffold	SC	SAMEA1024838	GCA_001338655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/655/GCA_001338655.1_6730_7_14	-	SMRU710
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.03408	39.6	-	CHHC01	60	2227	2021	4/21/15	3/11/17	Scaffold	SC	SAMEA1024840	GCA_001338675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/675/GCA_001338675.1_6731_1_19	-	SMRU1003
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.38135	65.6	-	FQCM01	70	4277	4103	11/23/16	3/14/17	Scaffold	SC	SAMEA2683015	GCA_900124495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/495/GCA_900124495.1_14893_2_85	-	2926STDY5723768
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.26768	50.5	-	NLPF01	281	5523	5130	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440291	GCA_002230355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/355/GCA_002230355.1_ASM223035v1	-	MOD1-EC5450
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82822	52	-	CEZM01	53	5020	4642	3/10/15	2/27/17	Scaffold	SC	SAMEA1964925	GCA_001078785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/785/GCA_001078785.1_10493_1_39	-	MDUST214
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87396	32.6	-	CIAN01	34	3022	2892	4/21/15	3/5/17	Contig	SC	SAMEA1466503	GCA_001353895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/895/GCA_001353895.1_7907_4_81	-	USFL173
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87886	32.6	-	CHEM01	38	3021	2896	4/21/15	3/5/17	Contig	SC	SAMEA1466504	GCA_001353915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/915/GCA_001353915.1_7907_4_23	-	USFL116
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73365	52	-	CEYE01	58	4895	4538	3/10/15	2/27/17	Scaffold	SC	SAMEA2150932	GCA_001078825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/825/GCA_001078825.1_10541_2_25	-	MDUST284
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.46978	50.5	-	NLQB01	340	5727	5281	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440306	GCA_002230365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/365/GCA_002230365.1_ASM223036v1	-	MOD1-EC5268
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36315	65.6	-	FQCN01	79	4271	4070	11/23/16	3/14/17	Scaffold	SC	SAMEA2683018	GCA_900124505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/505/GCA_900124505.1_14893_2_86	-	2926STDY5723771
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07985	39.5	-	CFFN01	104	2260	2049	3/15/15	3/11/17	Scaffold	SC	SAMEA1024846	GCA_001338715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/715/GCA_001338715.1_6730_8_10	-	SMRU730
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.13455	39.5	-	CHSC01	89	2347	2094	4/21/15	3/11/17	Scaffold	SC	SAMEA1024853	GCA_001338755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/755/GCA_001338755.1_6731_3_2	-	SMRU1034
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.38052	65.6	-	FQCO01	66	4275	4104	11/23/16	3/14/17	Scaffold	SC	SAMEA2683022	GCA_900124515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/515/GCA_900124515.1_14893_2_87	-	2926STDY5723775
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.6524	50.7	-	NLOK01	49	4698	4468	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05464534	GCA_002230395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/395/GCA_002230395.1_ASM223039v1	-	MOD1-EC5478
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72285	52	-	CEXI01	52	4891	4513	3/10/15	2/27/17	Scaffold	SC	SAMEA2143969	GCA_001078845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/845/GCA_001078845.1_10493_1_21	-	MDUST159
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88033	32.6	-	CFOT01	42	3028	2896	3/15/15	3/5/17	Contig	SC	SAMEA1466507	GCA_001353935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/935/GCA_001353935.1_7907_4_22	-	USFL115
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.82255	32.7	-	CGGX01	26	2955	2840	3/15/15	3/5/17	Contig	SC	SAMEA1466509	GCA_001353955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/955/GCA_001353955.1_7907_4_52	-	USFL145
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72098	52	-	CEXJ01	52	4875	4513	3/13/15	2/27/17	Scaffold	SC	SAMEA2150595	GCA_001078865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/865/GCA_001078865.1_10561_2_64	-	np93
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.09264	50.5	-	NLOL01	118	5203	4916	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05464535	GCA_002230405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/405/GCA_002230405.1_ASM223040v1	-	MOD1-EC5477
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37272	65.6	-	FQCP01	76	4280	4097	11/23/16	3/14/17	Scaffold	SC	SAMEA2683024	GCA_900124525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/525/GCA_900124525.1_14893_2_88	-	2926STDY5723777
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.0796	39.7	-	CHTO01	70	2300	2081	4/21/15	3/11/17	Scaffold	SC	SAMEA1024872	GCA_001338795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/795/GCA_001338795.1_6755_3_21	-	23B
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.16981	39.6	-	CFFL01	60	2404	2187	3/15/15	3/11/17	Scaffold	SC	SAMEA1024878	GCA_001338815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/815/GCA_001338815.1_6730_5_7	-	SMRU655
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36152	65.6	-	FQCQ01	89	4289	4083	11/23/16	3/14/17	Scaffold	SC	SAMEA2683025	GCA_900124535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/535/GCA_900124535.1_14893_2_89	-	2926STDY5723778
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.88863	50.7	-	NLPE01	70	5012	4796	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440290	GCA_002230455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/455/GCA_002230455.1_ASM223045v1	-	MOD1-EC5452
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7214	52	-	CEYH01	55	4881	4517	3/9/15	2/27/17	Scaffold	SC	SAMEA2158489	GCA_001078885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/885/GCA_001078885.1_10562_2_13	-	MDUST167
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87186	32.6	-	CHFA01	48	3020	2890	4/21/15	3/5/17	Contig	SC	SAMEA1466512	GCA_001353975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/975/GCA_001353975.1_7907_4_20	-	USFL113
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87555	32.6	-	CFPU01	29	3022	2894	3/15/15	3/5/17	Contig	SC	SAMEA1466514	GCA_001353995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/995/GCA_001353995.1_7907_4_41	-	USFL134
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70195	52.1	-	CEZU01	50	4857	4506	3/10/15	2/27/17	Scaffold	SC	SAMEA2147409	GCA_001078905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/905/GCA_001078905.1_10493_1_70	-	MDUST322
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.85052	50.7	-	NLOT01	103	4992	4698	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440328	GCA_002230465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/465/GCA_002230465.1_ASM223046v1	-	MOD1-EC5467
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35374	65.6	-	FQCR01	72	4275	4096	11/23/16	3/14/17	Scaffold	SC	SAMEA2682885	GCA_900124545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/545/GCA_900124545.1_14893_2_9	-	2926STDY5723637
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11735	39.5	-	CHHF01	51	2336	2101	4/21/15	3/11/17	Scaffold	SC	SAMEA1024879	GCA_001338835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/835/GCA_001338835.1_6731_5_18	-	SMRU1098
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.02622	39.6	-	CIHK01	45	2236	2024	4/21/15	3/11/17	Scaffold	SC	SAMEA1024886	GCA_001338855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/855/GCA_001338855.1_6755_1_12	-	SMRU780
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36446	65.6	-	FQCS01	84	4280	4073	11/23/16	3/14/17	Scaffold	SC	SAMEA2683026	GCA_900124555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/555/GCA_900124555.1_14893_2_90	-	2926STDY5723779
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.67072	50.6	-	NLOU01	130	4765	4507	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440329	GCA_002230485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/485/GCA_002230485.1_ASM223048v1	-	MOD1-EC5466
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72623	52	-	CEXO01	53	4892	4507	3/11/15	2/27/17	Scaffold	SC	SAMEA2143165	GCA_001078925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/925/GCA_001078925.1_10493_1_24	-	MDUST168
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.84674	32.7	-	CFOL01	36	2982	2865	3/15/15	3/5/17	Contig	SC	SAMEA1466515	GCA_001354015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/015/GCA_001354015.1_7907_4_21	-	USFL114
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88533	32.6	-	CFOQ01	41	3029	2900	3/15/15	3/5/17	Contig	SC	SAMEA1466516	GCA_001354035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/035/GCA_001354035.1_7907_4_79	-	USFL171
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69902	52.1	-	CIPV01	38	4848	4500	3/21/15	2/27/17	Scaffold	SC	SAMEA2056055	GCA_001078965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/078/965/GCA_001078965.1_10071_3_27	-	1025041
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.83355	50.7	-	NLOV01	121	4862	4625	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440282	GCA_002230535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/535/GCA_002230535.1_ASM223053v1	-	MOD1-EC5465
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36025	65.6	-	FQCU01	73	4265	4081	11/23/16	3/14/17	Scaffold	SC	SAMEA2683030	GCA_900124565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/565/GCA_900124565.1_14893_2_91	-	2926STDY5723783
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.30242	39.6	-	CIHU01	137	2541	2255	4/21/15	3/11/17	Scaffold	SC	SAMEA1024888	GCA_001338875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/875/GCA_001338875.1_6775_2_8	-	SMRU848
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.20794	39.5	-	CIHN01	50	2435	2193	4/21/15	3/11/17	Scaffold	SC	SAMEA1024896	GCA_001338915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/915/GCA_001338915.1_6755_1_24	-	SMRU792
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36816	65.6	-	FQCT01	68	4275	4079	11/23/16	3/14/17	Scaffold	SC	SAMEA2683062	GCA_900124575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/575/GCA_900124575.1_14893_2_94	-	2926STDY5723816
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.99868	50.7	-	NLOX01	134	5198	4847	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05464537	GCA_002230545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/545/GCA_002230545.1_ASM223054v1	-	MOD1-EC5463
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.6845	52.1	-	CIQV01	45	4829	4475	3/21/15	2/27/17	Scaffold	SC	SAMEA2059031	GCA_001079005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/005/GCA_001079005.1_10071_3_52	-	412921
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92682	32.6	-	CFQC01	33	3098	2971	3/15/15	3/5/17	Contig	SC	SAMEA1466517	GCA_001354055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/055/GCA_001354055.1_7907_4_90	-	USFL182
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.91543	32.6	-	CIJM01	35	3080	2950	4/21/15	3/5/17	Contig	SC	SAMEA1466521	GCA_001354095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/095/GCA_001354095.1_7907_4_9	-	USFL103
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93138	51.8	-	CITF01	61	5128	4749	3/21/15	2/27/17	Scaffold	SC	SAMEA2067722	GCA_001079025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/025/GCA_001079025.1_10071_8_65	-	2010K-0507
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.89787	50.6	-	NLOY01	80	4989	4629	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440285	GCA_002230575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/575/GCA_002230575.1_ASM223057v1	-	MOD1-EC5461
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32341	65.6	-	FQCV01	71	4243	4062	11/23/16	3/14/17	Scaffold	SC	SAMEA2683072	GCA_900124585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/585/GCA_900124585.1_14893_2_95	-	2926STDY5723826
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10241	39.6	-	CHOY01	59	2304	2051	4/21/15	3/11/17	Scaffold	SC	SAMEA1024897	GCA_001338935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/935/GCA_001338935.1_6680_7_6	-	SMRU966
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.0706	39.7	-	CIIC01	85	2293	2079	4/21/15	3/11/17	Scaffold	SC	SAMEA1024899	GCA_001338975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/975/GCA_001338975.1_6731_1_1	-	SMRU985
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37284	65.6	-	FQCW01	64	4282	4102	11/23/16	3/14/17	Scaffold	SC	SAMEA2682804	GCA_900124595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/595/GCA_900124595.1_15277_3_50	-	2926STDY5723555
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.94329	50.5	-	NLOW01	170	5091	4798	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440283	GCA_002230595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/595/GCA_002230595.1_ASM223059v1	-	MOD1-EC5464
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.85175	52	-	CIPW01	48	5058	4688	3/21/15	2/27/17	Scaffold	SC	SAMEA2059695	GCA_001079085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/085/GCA_001079085.1_10060_6_91	-	H084140247
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87708	32.6	-	CFPI01	33	3022	2895	3/15/15	3/5/17	Contig	SC	SAMEA1466522	GCA_001354115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/115/GCA_001354115.1_7907_4_89	-	USFL181
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87495	32.6	-	CFPR01	39	3018	2896	3/15/15	3/5/17	Contig	SC	SAMEA1466529	GCA_001354135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/135/GCA_001354135.1_7907_4_39	-	USFL132
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.85202	52	-	CIPT01	44	5048	4680	3/21/15	2/27/17	Scaffold	SC	SAMEA2056847	GCA_001079105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/105/GCA_001079105.1_10060_6_87	-	H083520583
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.99327	50.6	-	NLQN01	130	5191	4879	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279551	GCA_002230615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/615/GCA_002230615.1_ASM223061v1	-	MOD1-EC5217
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35092	65.6	-	FQSW01	69	4279	4090	11/30/16	3/14/17	Scaffold	SC	SAMEA2682810	GCA_900124605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/605/GCA_900124605.1_15277_3_51	-	2926STDY5723561
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11645	39.7	-	CHRT01	57	2363	2124	4/21/15	3/11/17	Scaffold	SC	SAMEA1024905	GCA_001338995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/995/GCA_001338995.1_6731_3_14	-	SMRU1046
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.06081	39.7	-	CFGU01	59	2261	2043	3/15/15	3/11/17	Scaffold	SC	SAMEA1024909	GCA_001339015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/015/GCA_001339015.1_6731_6_20	-	SMRU1124
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37335	65.6	-	FQCX01	66	4290	4105	11/23/16	3/14/17	Scaffold	SC	SAMEA2682821	GCA_900124615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/615/GCA_900124615.1_15277_3_52	-	2926STDY5723572
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.165	50.6	-	NLPS01	366	5525	5062	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05452844	GCA_002230635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/635/GCA_002230635.1_ASM223063v1	-	MOD1-EC5408
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69956	52.1	-	CIRA01	40	4865	4506	3/21/15	2/27/17	Scaffold	SC	SAMEA2057114	GCA_001079125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/125/GCA_001079125.1_10071_3_59	-	627334
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87554	32.6	-	CIAL01	27	3011	2891	4/21/15	3/5/17	Contig	SC	SAMEA1466530	GCA_001354155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/155/GCA_001354155.1_7907_4_8	-	USFL102
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92335	32.7	-	CHKM01	30	3088	2959	4/21/15	3/5/17	Contig	SC	SAMEA1466531	GCA_001354175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/175/GCA_001354175.1_7907_4_86	-	USFL178
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73274	52	-	CINQ01	47	4896	4540	3/21/15	2/27/17	Scaffold	SC	SAMEA2058628	GCA_001079185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/185/GCA_001079185.1_10060_5_36	-	A246
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.93668	50.6	-	NLPG01	150	5161	4854	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440293	GCA_002230665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/665/GCA_002230665.1_ASM223066v1	-	MOD1-EC5448
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32575	65.6	-	FQCY01	64	4252	4077	11/23/16	3/14/17	Scaffold	SC	SAMEA2682850	GCA_900124625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/625/GCA_900124625.1_15277_3_53	-	2926STDY5723601
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.06848	39.5	-	CHSO01	86	2280	2045	4/21/15	3/11/17	Scaffold	SC	SAMEA1024911	GCA_001339035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/035/GCA_001339035.1_6731_5_5	-	SMRU1085
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.10842	39.7	-	CIHE01	60	2353	2121	4/21/15	3/11/17	Scaffold	SC	SAMEA1024916	GCA_001339095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/095/GCA_001339095.1_6730_8_23	-	SMRU743
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32763	65.6	-	FQSV01	72	4247	4073	11/30/16	3/14/17	Scaffold	SC	SAMEA2682939	GCA_900124635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/635/GCA_900124635.1_15277_3_55	-	2926STDY5723691
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.74401	50.5	-	NLQE01	126	4915	4608	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04448477	GCA_002230755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/755/GCA_002230755.1_ASM223075v1	-	MOD1-EC5228
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82576	52	-	CISD01	42	5002	4647	3/21/15	2/27/17	Scaffold	SC	SAMEA2064150	GCA_001079205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/205/GCA_001079205.1_10071_8_15	-	Gen-0015
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92014	32.7	-	CFPE01	48	3087	2954	3/15/15	3/5/17	Contig	SC	SAMEA1466533	GCA_001354195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/195/GCA_001354195.1_7907_4_87	-	USFL179
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.8738	32.6	-	CHEU01	50	3024	2892	4/21/15	3/5/17	Contig	SC	SAMEA1466535	GCA_001354215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/215/GCA_001354215.1_7907_4_26	-	USFL119
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93165	51.8	-	CIUF01	61	5121	4743	3/21/15	2/27/17	Scaffold	SC	SAMEA2066348	GCA_001079265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/265/GCA_001079265.1_10071_8_88	-	2010K-0524
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.08197	50.5	-	NLQZ01	215	5265	4882	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279533	GCA_002230765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/765/GCA_002230765.1_ASM223076v1	-	MOD1-EC5194
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36591	65.6	-	FQCZ01	63	4273	4088	11/23/16	3/14/17	Scaffold	SC	SAMEA2682960	GCA_900124645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/645/GCA_900124645.1_15277_3_57	-	2926STDY5723713
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.04642	39.6	-	CFHK01	56	2270	2051	3/15/15	3/11/17	Scaffold	SC	SAMEA1024917	GCA_001339115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/115/GCA_001339115.1_6755_3_19	-	SMRU883
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08251	39.6	-	CGWU01	82	2256	2047	4/21/15	3/14/17	Scaffold	SC	SAMEA1024919	GCA_001339135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/135/GCA_001339135.1_6731_1_9	-	SMRU993
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36072	65.6	-	FQNP01	74	4259	4076	11/25/16	3/14/17	Scaffold	SC	SAMEA2683128	GCA_900127125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/125/GCA_900127125.1_14722_7_18	-	2926STDY5723882
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.44516	50.7	-	NLQC01	271	5820	5406	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440307	GCA_002230775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/775/GCA_002230775.1_ASM223077v1	-	MOD1-EC5267
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72097	52	-	CINZ01	52	4877	4518	3/21/15	2/27/17	Scaffold	SC	SAMEA2056044	GCA_001079285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/285/GCA_001079285.1_10060_5_77	-	B1596
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87769	32.6	-	CHEZ01	40	3020	2891	4/21/15	3/5/17	Contig	SC	SAMEA1466536	GCA_001354235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/235/GCA_001354235.1_7907_4_47	-	USFL140
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87836	32.6	-	CFPM01	40	3026	2896	3/15/15	3/5/17	Contig	SC	SAMEA1466537	GCA_001354255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/255/GCA_001354255.1_7907_4_12	-	USFL106
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70057	52.1	-	CIQE01	41	4870	4512	3/21/15	2/27/17	Scaffold	SC	SAMEA2059021	GCA_001079385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/385/GCA_001079385.1_10071_3_22	-	231697
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.70457	50.4	-	NLPK01	752	5807	5343	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440295	GCA_002230835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/835/GCA_002230835.1_ASM223083v1	-	MOD1-EC5442
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.38675	65.6	-	FQNM01	75	4310	4110	11/25/16	3/14/17	Scaffold	SC	SAMEA2682896	GCA_900127135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/135/GCA_900127135.1_14892_2_46	-	2926STDY5723648
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07196	39.7	-	CHRJ01	72	2286	2077	4/21/15	3/11/17	Scaffold	SC	SAMEA1024925	GCA_001339155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/155/GCA_001339155.1_6731_3_16	-	SMRU1048
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.05773	39.6	-	CHQP01	74	2267	2027	4/21/15	3/11/17	Scaffold	SC	SAMEA1024932	GCA_001339175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/175/GCA_001339175.1_6730_8_14	-	SMRU734
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36745	65.6	-	FQNH01	73	4279	4078	11/25/16	3/14/17	Scaffold	SC	SAMEA2683097	GCA_900127145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/145/GCA_900127145.1_14722_7_6	-	2926STDY5723851
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.0324	50.5	-	NLRA01	168	5189	4831	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279532	GCA_002230855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/855/GCA_002230855.1_ASM223085v1	-	MOD1-EC5193
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7205	52	-	CISE01	41	4878	4528	3/21/15	2/27/17	Scaffold	SC	SAMEA2064154	GCA_001079405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/405/GCA_001079405.1_10071_8_27	-	Gen-0027
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.8573	32.6	-	CIAH01	54	3007	2880	4/21/15	3/5/17	Contig	SC	SAMEA1466542	GCA_001354275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/275/GCA_001354275.1_7907_4_11	-	USFL105
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.91442	32.6	-	CIAO01	35	3062	2934	4/21/15	3/5/17	Contig	SC	SAMEA1466543	GCA_001354295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/295/GCA_001354295.1_7907_4_69	-	USFL162
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.79381	52.1	-	CIUE01	53	4981	4618	3/21/15	2/27/17	Scaffold	SC	SAMEA2064350	GCA_001079625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/625/GCA_001079625.1_10071_8_84	-	2010K-0626
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.77105	50.6	-	NLRM01	82	4866	4609	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279516	GCA_002230875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/875/GCA_002230875.1_ASM223087v1	-	MOD1-EC5177
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3895	65.6	-	FQNG01	61	4282	4099	11/25/16	3/14/17	Scaffold	SC	SAMEA2682951	GCA_900127155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/155/GCA_900127155.1_14892_2_61	-	2926STDY5723703
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.22981	39.6	-	CICE01	52	2471	2232	4/21/15	3/11/17	Scaffold	SC	SAMEA1024934	GCA_001339195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/195/GCA_001339195.1_6805_1_1	-	SMRU1009
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.0734	39.7	-	CHQG01	91	2283	2082	4/21/15	3/11/17	Scaffold	SC	SAMEA1024943	GCA_001339235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/235/GCA_001339235.1_6730_8_11	-	SMRU731
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36441	65.6	-	FQNO01	72	4268	4080	11/25/16	3/14/17	Scaffold	SC	SAMEA2682887	GCA_900127165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/165/GCA_900127165.1_14893_2_10	-	2926STDY5723639
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.09611	50.7	-	NLQF01	186	5361	4961	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04448476	GCA_002230915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/915/GCA_002230915.1_ASM223091v1	-	MOD1-EC5227
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.88954	51.9	-	CIQG01	50	5097	4724	3/21/15	2/27/17	Scaffold	SC	SAMEA2057111	GCA_001079645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/645/GCA_001079645.1_10071_3_44	-	1026656
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.91871	32.6	-	CFOP01	77	3102	2972	3/15/15	3/5/17	Contig	SC	SAMEA1710103	GCA_001354435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/435/GCA_001354435.1_9235_1_15	-	FL390
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.85759	32.6	-	CGDX01	22	2999	2877	3/15/15	3/5/17	Contig	SC	SAMEA1710114	GCA_001354535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/535/GCA_001354535.1_9266_1_11	-	FL365
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70012	52.1	-	CIQK01	39	4856	4504	3/21/15	2/27/17	Scaffold	SC	SAMEA2059024	GCA_001079685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/685/GCA_001079685.1_10071_3_31	-	226195
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.8576	50.4	-	NLQA01	125	5081	4745	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440305	GCA_002230925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/925/GCA_002230925.1_ASM223092v1	-	MOD1-EC5269
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35881	65.5	-	FQNW01	82	4289	4064	11/25/16	3/14/17	Scaffold	SC	SAMEA2682893	GCA_900127175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/175/GCA_900127175.1_14893_2_15	-	2926STDY5723645
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.03213	39.7	-	CHRL01	68	2232	2020	4/21/15	3/5/17	Scaffold	SC	SAMEA1024951	GCA_001339295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/295/GCA_001339295.1_6731_5_3	-	SMRU1083
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.13285	39.7	-	CFDZ01	86	2313	2064	3/15/15	3/5/17	Scaffold	SC	SAMEA1024954	GCA_001339315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/315/GCA_001339315.1_6731_6_7	-	SMRU1111
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35063	65.6	-	FQOO01	78	4274	4070	11/25/16	3/14/17	Scaffold	SC	SAMEA2682855	GCA_900127185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/185/GCA_900127185.1_14892_2_39	-	2926STDY5723606
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.04095	50.7	-	NLPT01	159	5260	4918	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440298	GCA_002230935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/935/GCA_002230935.1_ASM223093v1	-	MOD1-EC5276
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93229	51.8	-	CIPC01	53	5131	4754	3/21/15	2/27/17	Scaffold	SC	SAMEA2055259	GCA_001079705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/705/GCA_001079705.1_10060_6_47	-	UI3915
Staphylococcus aureus	1280	PRJEB7753	272868	Terrabacteria group	Firmicutes	2.86258	32.8	-	CDLR01	3	2971	2779	3/21/15	3/5/17	Contig	WTSI	SAMEA1464023	GCA_001369415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/369/415/GCA_001369415.1_SASCBU26	-	SASCBU26
Staphylococcus aureus	1280	PRJNA284620	284620	Terrabacteria group	Firmicutes	2.83016	32.662	plasmid pSA-CC022-1:NZ_CM003520.1/CM003520.1; plasmid pSA-CC022-2:NZ_CM003521.1/CM003521.1	LIGS01	36	3011	2749	10/23/15	3/5/17	Contig	Santa Clara University	SAMN03988633	GCA_001411605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/605/GCA_001411605.1_ASM141160v1	-	CC022
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.78695	52.1	-	CIPP01	45	4953	4581	3/21/15	2/27/17	Scaffold	SC	SAMEA2059692	GCA_001079725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/725/GCA_001079725.1_10060_6_79	-	129-0303-M
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.10761	50.3	-	NLPU01	222	5238	4890	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440299	GCA_002230975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/975/GCA_002230975.1_ASM223097v1	-	MOD1-EC5275
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36633	65.6	-	FQNL01	69	4266	4080	11/25/16	3/14/17	Scaffold	SC	SAMEA2683134	GCA_900127195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/195/GCA_900127195.1_14722_7_21	-	2926STDY5723888
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14846	39.5	-	CGXN01	73	2392	2155	4/21/15	3/5/17	Scaffold	SC	SAMEA1024955	GCA_001339335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/335/GCA_001339335.1_6791_6_16	-	SMRU640
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12175	39.7	-	CIHG01	61	2344	2108	4/21/15	3/5/17	Scaffold	SC	SAMEA1024960	GCA_001339355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/355/GCA_001339355.1_6730_5_10	-	SMRU658
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32388	65.6	-	FQNY01	80	4251	4059	11/25/16	3/14/17	Scaffold	SC	SAMEA2683098	GCA_900127205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/205/GCA_900127205.1_14722_8_69	-	2926STDY5723852
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.52641	50.6	-	NLPZ01	391	5948	5459	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440304	GCA_002230995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/995/GCA_002230995.1_ASM223099v1	-	MOD1-EC5270
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.92579	51.8	-	CIOU01	58	5122	4743	3/21/15	2/27/17	Scaffold	SC	SAMEA2055256	GCA_001079745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/745/GCA_001079745.1_10060_6_38	-	UI3452
Staphylococcus aureus	1280	PRJNA284620	284620	Terrabacteria group	Firmicutes	2.84825	32.7651	plasmid pSA-CC072-1:NZ_CM003524.1/CM003524.1	LIGT01	24	2994	2816	10/23/15	3/5/17	Contig	Santa Clara University	SAMN03988826	GCA_001411615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/615/GCA_001411615.1_ASM141161v1	-	CC072
Staphylococcus aureus	1280	PRJNA284620	284620	Terrabacteria group	Firmicutes	2.77292	32.7522	plasmid pSA-CC017-1:NZ_CM003519.1/CM003519.1	LIAF01	23	2882	2713	10/23/15	3/5/17	Contig	Santa Clara University	SAMN03968919	GCA_001411635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/635/GCA_001411635.1_ASM141163v1	-	CC017
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7395	52.1	-	CIPU01	46	4925	4561	3/21/15	2/27/17	Scaffold	SC	SAMEA2056544	GCA_001079765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/765/GCA_001079765.1_10060_6_9	-	SV179
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.19057	50.4	-	NLPV01	357	5520	5078	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440300	GCA_002231005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/005/GCA_002231005.1_ASM223100v1	-	MOD1-EC5274
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36411	65.6	-	FQNJ01	75	4272	4072	11/25/16	3/14/17	Scaffold	SC	SAMEA2682902	GCA_900127215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/215/GCA_900127215.1_14893_2_23	-	2926STDY5723654
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.06218	39.8	-	CHPF01	69	2217	1998	4/21/15	3/5/17	Scaffold	SC	SAMEA1024962	GCA_001339375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/375/GCA_001339375.1_6680_7_2	-	SMRU962
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.05441	39.6	-	CHRG01	99	2255	2033	4/21/15	3/5/17	Scaffold	SC	SAMEA1024963	GCA_001339395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/395/GCA_001339395.1_6731_6_6	-	SMRU1110
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37233	65.6	-	FQNI01	71	4272	4093	11/25/16	3/14/17	Scaffold	SC	SAMEA2682816	GCA_900127225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/225/GCA_900127225.1_14722_6_56	-	2926STDY5723567
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.12893	50.6	-	NLRY01	253	5401	5018	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279449	GCA_002231015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/015/GCA_002231015.1_ASM223101v1	-	MOD1-EC5116
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.85145	52	-	CIPY01	47	5054	4672	3/21/15	2/27/17	Scaffold	SC	SAMEA2056849	GCA_001079825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/825/GCA_001079825.1_10060_6_93	-	H084260341
Staphylococcus aureus	1280	PRJNA284620	284620	Terrabacteria group	Firmicutes	2.81207	32.7607	plasmid pSA-CC169-1:NZ_CM003522.1/CM003522.1; plasmid pSA-CC169-2:NZ_CM003523.1/CM003523.1	LIGU01	29	2929	2728	10/23/15	3/5/17	Contig	Santa Clara University	SAMN03988862	GCA_001411685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/685/GCA_001411685.1_ASM141168v1	-	CC169
Staphylococcus aureus subsp. aureus	46170	PRJNA288099	288099	Terrabacteria group	Firmicutes	2.88502	32.6	-	LFUZ01	34	3029	2901	11/25/15	3/5/17	Contig	"Genomic Research Laboratory, GRL; Geneva University Hospital, HUG  "	SAMN03793205	GCA_001448005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/005/GCA_001448005.1_ASM144800v1	26464204	MRSA_S8
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.59411	52.1	-	CIRH01	48	4721	4367	3/21/15	2/27/17	Scaffold	SC	SAMEA2056352	GCA_001079845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/845/GCA_001079845.1_10071_3_93	-	A137
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.42523	50.4	-	NLPW01	240	5783	5387	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440301	GCA_002231025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/025/GCA_002231025.1_ASM223102v1	-	MOD1-EC5273
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37247	65.6	-	FQOC01	76	4278	4084	11/25/16	3/14/17	Scaffold	SC	SAMEA2683058	GCA_900127235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/235/GCA_900127235.1_14722_8_38	-	2926STDY5723812
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.06163	39.7	-	CHRC01	75	2266	2055	4/21/15	3/5/17	Scaffold	SC	SAMEA1024969	GCA_001339435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/435/GCA_001339435.1_6731_1_8	-	SMRU992
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08583	39.5	-	CHTP01	60	2272	2046	4/21/15	3/5/17	Scaffold	SC	SAMEA1024971	GCA_001339455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/455/GCA_001339455.1_6775_1_2	-	SMRU818
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36331	65.6	-	FQNN01	76	4277	4083	11/25/16	3/14/17	Scaffold	SC	SAMEA2682747	GCA_900127245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/245/GCA_900127245.1_14722_6_26	-	2926STDY5723497
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.7068	50.3	-	NLPX01	516	6277	5715	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440302	GCA_002231075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/075/GCA_002231075.1_ASM223107v1	-	MOD1-EC5272
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71975	52	-	CIOG01	43	4877	4521	3/21/15	2/27/17	Scaffold	SC	SAMEA2056545	GCA_001079885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/885/GCA_001079885.1_10060_6_12	-	SV357
Staphylococcus aureus subsp. aureus MRSA_S4	1337995	PRJNA288095	288095	Terrabacteria group	Firmicutes	2.88137	32.6	-	LFUW01	40	3021	2891	11/25/15	3/5/17	Contig	"Genomic Research Laboratory, GRL; Geneva University Hospital, HUG  "	SAMN03793202	GCA_001448035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/035/GCA_001448035.1_ASM144803v1	26464204	MRSA_S4
Staphylococcus aureus subsp. aureus	46170	PRJNA288102	288102	Terrabacteria group	Firmicutes	2.91338	32.7	-	LFVB01	33	3088	2947	11/25/15	3/5/17	Contig	"Genomic Research Laboratory, GRL; Geneva University Hospital, HUG  "	SAMN03793207	GCA_001448075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/075/GCA_001448075.1_ASM144807v1	26464204	MRSA_S10
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71389	52	-	CIOJ01	54	4869	4513	3/21/15	2/27/17	Scaffold	SC	SAMEA2056547	GCA_001079925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/925/GCA_001079925.1_10060_6_18	-	SV610
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.99385	50.6	-	NLQG01	146	5204	4877	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279562	GCA_002231085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/085/GCA_002231085.1_ASM223108v1	-	MOD1-EC5226
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36834	65.6	-	FQOQ01	75	4275	4088	11/25/16	3/14/17	Scaffold	SC	SAMEA2683016	GCA_900127255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/255/GCA_900127255.1_14722_8_3	-	2926STDY5723769
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11366	39.6	-	CHRR01	42	2294	2066	4/21/15	3/5/17	Scaffold	SC	SAMEA1024977	GCA_001339495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/495/GCA_001339495.1_6731_5_1	-	SMRU1081
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.03632	39.7	-	CHSF01	64	2242	2030	4/21/15	3/5/17	Scaffold	SC	SAMEA1024984	GCA_001339515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/515/GCA_001339515.1_6731_4_24	-	SMRU1080
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36777	65.6	-	FQNK01	77	4272	4072	11/25/16	3/14/17	Scaffold	SC	SAMEA2682724	GCA_900127265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/265/GCA_900127265.1_14722_7_63	-	2926STDY5723474
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.20779	50.5	-	NLPY01	304	5512	5140	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440303	GCA_002231095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/095/GCA_002231095.1_ASM223109v1	-	MOD1-EC5271
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73289	52	-	CIRB01	44	4887	4538	3/21/15	2/27/17	Scaffold	SC	SAMEA2056205	GCA_001079945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/945/GCA_001079945.1_10071_3_66	-	325681
Staphylococcus aureus subsp. aureus	46170	PRJNA288106	288106	Terrabacteria group	Firmicutes	2.83703	32.7	-	LFVF01	25	2970	2852	11/25/15	3/5/17	Contig	"Genomic Research Laboratory, GRL; Geneva University Hospital, HUG  "	SAMN03793211	GCA_001448095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/095/GCA_001448095.1_ASM144809v1	26464204	MRSA_S14
Staphylococcus aureus subsp. aureus	46170	PRJNA288103	288103	Terrabacteria group	Firmicutes	2.89406	32.7	-	LFVC01	26	3052	2928	11/25/15	3/5/17	Contig	"Genomic Research Laboratory, GRL; Geneva University Hospital, HUG  "	SAMN03793208	GCA_001448105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/105/GCA_001448105.1_ASM144810v1	26464204	MRSA_S11
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82554	52	-	CISJ01	43	5008	4650	3/21/15	2/27/17	Scaffold	SC	SAMEA2064022	GCA_001079965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/079/965/GCA_001079965.1_10071_8_3	-	Gen-0003
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.10251	50.6	-	NLQM01	199	5238	4891	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279554	GCA_002231115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/115/GCA_002231115.1_ASM223111v1	-	MOD1-EC5218
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3734	65.6	-	FQOR01	82	4282	4089	11/25/16	3/14/17	Scaffold	SC	SAMEA2682904	GCA_900127275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/275/GCA_900127275.1_14893_2_24	-	2926STDY5723656
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.13298	39.6	-	CHTS01	44	2380	2139	4/21/15	3/5/17	Scaffold	SC	SAMEA1024985	GCA_001339535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/535/GCA_001339535.1_6755_4_5	-	SMRU1133
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08429	39.6	-	CHRP01	59	2290	2048	4/21/15	3/15/17	Scaffold	SC	SAMEA1024986	GCA_001339555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/555/GCA_001339555.1_6730_8_18	-	SMRU738
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37435	65.6	-	FQOE01	70	4271	4099	11/25/16	3/14/17	Scaffold	SC	SAMEA2683144	GCA_900127285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/285/GCA_900127285.1_14722_8_95	-	2926STDY5723898
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.83855	50.6	-	NLQO01	158	5034	4747	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279550	GCA_002231155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/155/GCA_002231155.1_ASM223115v1	-	MOD1-EC5216
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71978	52	-	CIST01	43	4876	4523	3/21/15	2/27/17	Scaffold	SC	SAMEA2064158	GCA_001080045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/045/GCA_001080045.1_10071_8_39	-	Gen-0039
Staphylococcus aureus subsp. aureus	46170	PRJNA288108	288108	Terrabacteria group	Firmicutes	2.90778	32.7	-	LFVH01	27	3076	2944	11/25/15	3/5/17	Contig	"Genomic Research Laboratory, GRL; Geneva University Hospital, HUG  "	SAMN03793213	GCA_001448135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/135/GCA_001448135.1_ASM144813v1	26464204	MRSA_S17
Staphylococcus aureus subsp. aureus	46170	PRJNA288109	288109	Terrabacteria group	Firmicutes	2.88249	32.6	-	LFVI01	24	3024	2902	11/25/15	3/5/17	Contig	"Genomic Research Laboratory, GRL; Geneva University Hospital, HUG  "	SAMN03793214	GCA_001448155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/155/GCA_001448155.1_ASM144815v1	26464204	MRSA_S18
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74548	52.1	-	CEYC01	59	4937	4554	3/10/15	2/27/17	Scaffold	SC	SAMEA2142785	GCA_001080065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/065/GCA_001080065.1_10493_1_19	-	MDUST156
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.92752	50.7	-	NLQH01	160	5086	4759	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279560	GCA_002231165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/165/GCA_002231165.1_ASM223116v1	-	MOD1-EC5224
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32346	65.6	-	FQNU01	68	4244	4056	11/25/16	3/14/17	Scaffold	SC	SAMEA2682734	GCA_900127305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/305/GCA_900127305.1_14722_7_69	-	2926STDY5723484
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07545	39.7	-	CFFV01	70	2297	2082	3/15/15	3/5/17	Scaffold	SC	SAMEA1024987	GCA_001339575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/575/GCA_001339575.1_6775_1_3	-	SMRU819
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12508	39.5	-	CHTC01	63	2351	2112	4/21/15	3/5/17	Scaffold	SC	SAMEA1024988	GCA_001339595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/595/GCA_001339595.1_6755_2_12	-	SMRU804
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36428	65.6	-	FQNQ01	90	4278	4080	11/25/16	3/14/17	Scaffold	SC	SAMEA2683148	GCA_900127315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/315/GCA_900127315.1_14722_7_28	-	2926STDY5723903
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.01799	50.8	-	NLRP01	192	5326	5006	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279513	GCA_002231185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/185/GCA_002231185.1_ASM223118v1	-	MOD1-EC5174
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.68689	52.1	-	CIQM01	44	4839	4492	3/21/15	2/27/17	Scaffold	SC	SAMEA2059025	GCA_001080185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/185/GCA_001080185.1_10071_3_34	-	241451
Staphylococcus aureus subsp. aureus	46170	PRJNA288113	288113	Terrabacteria group	Firmicutes	2.92919	32.6	-	LFVM01	31	3094	2963	11/25/15	3/5/17	Contig	"Genomic Research Laboratory, GRL; Geneva University Hospital, HUG  "	SAMN03793218	GCA_001448175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/175/GCA_001448175.1_ASM144817v1	26464204	MRSA_S22
Staphylococcus aureus subsp. aureus	46170	PRJNA288114	288114	Terrabacteria group	Firmicutes	2.853	32.7	-	LFVN01	21	2989	2872	11/25/15	3/5/17	Contig	"Genomic Research Laboratory, GRL; Geneva University Hospital, HUG  "	SAMN03793219	GCA_001448185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/185/GCA_001448185.1_ASM144818v1	26464204	MRSA_S23
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9333	51.8	-	CINF01	60	5125	4734	3/21/15	2/27/17	Scaffold	SC	SAMEA2058618	GCA_001080265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/265/GCA_001080265.1_10060_5_3	-	01-2011-002432
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.26157	50.3	-	NLRB01	305	5526	5075	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279531	GCA_002231195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/195/GCA_002231195.1_ASM223119v1	-	MOD1-EC5192
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.367	65.6	-	FQNX01	86	4273	4083	11/25/16	3/14/17	Scaffold	SC	SAMEA2682753	GCA_900127325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/325/GCA_900127325.1_14722_7_84	-	2926STDY5723503
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14378	39.5	-	CFFJ01	51	2356	2126	3/15/15	3/5/17	Scaffold	SC	SAMEA1024994	GCA_001339635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/635/GCA_001339635.1_6730_4_12	-	SMRU636
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.05014	39.6	-	CGWR01	67	2224	1987	4/21/15	3/15/17	Scaffold	SC	SAMEA1024997	GCA_001339655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/655/GCA_001339655.1_6730_7_24	-	SMRU720
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36404	65.6	-	FQOS01	68	4273	4081	11/25/16	3/14/17	Scaffold	SC	SAMEA2682928	GCA_900127335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/335/GCA_900127335.1_14893_2_42	-	2926STDY5723680
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.2539	50.5	-	NLQI01	351	5671	5251	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279559	GCA_002231235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/235/GCA_002231235.1_ASM223123v1	-	MOD1-EC5223
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69679	52.1	-	CIPL01	42	4861	4500	3/21/15	2/27/17	Scaffold	SC	SAMEA2059690	GCA_001080305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/305/GCA_001080305.1_10060_6_73	-	61025
Staphylococcus aureus subsp. aureus	46170	PRJNA288097	288097	Terrabacteria group	Firmicutes	2.8939	32.7	-	LFUY01	28	3052	2925	11/25/15	3/5/17	Contig	"Genomic Research Laboratory, GRL; Geneva University Hospital, HUG  "	SAMN03793204	GCA_001448215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/215/GCA_001448215.1_ASM144821v1	26464204	MRSA_S7
Staphylococcus aureus subsp. aureus	46170	PRJNA288101	288101	Terrabacteria group	Firmicutes	2.86098	32.6	-	LFVA01	30	3009	2878	11/25/15	3/5/17	Contig	"Genomic Research Laboratory, GRL; Geneva University Hospital, HUG  "	SAMN03793206	GCA_001448235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/235/GCA_001448235.1_ASM144823v1	26464204	MRSA_S9
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82855	52	-	CITE01	46	5031	4667	3/21/15	2/27/17	Scaffold	SC	SAMEA2067639	GCA_001080345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/345/GCA_001080345.1_10071_8_50	-	Gen-0050
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.07822	50.5	-	NLRQ01	238	5317	4914	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279512	GCA_002231245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/245/GCA_002231245.1_ASM223124v1	-	MOD1-EC5173
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35969	65.6	-	FQOI01	71	4260	4058	11/25/16	3/14/17	Scaffold	SC	SAMEA2682889	GCA_900127345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/345/GCA_900127345.1_14893_2_12	-	2926STDY5723641
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.08772	39.6	-	CGWQ01	69	2291	2063	4/21/15	3/5/17	Scaffold	SC	SAMEA1025003	GCA_001339715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/715/GCA_001339715.1_6730_1_20	-	SMRU596
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12035	39.4	-	CHRA01	51	2313	2088	4/21/15	3/5/17	Scaffold	SC	SAMEA1025009	GCA_001339735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/735/GCA_001339735.1_6730_8_15	-	SMRU735
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37295	65.6	-	FQOD01	64	4278	4098	11/25/16	3/14/17	Scaffold	SC	SAMEA2682900	GCA_900127355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/355/GCA_900127355.1_14893_2_21	-	2926STDY5723652
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.46632	50.4	-	NLQJ01	528	5888	5381	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279558	GCA_002231255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/255/GCA_002231255.1_ASM223125v1	-	MOD1-EC5222
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.78064	52.1	-	CIRD01	52	4965	4613	3/21/15	2/27/17	Scaffold	SC	SAMEA2059033	GCA_001080365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/365/GCA_001080365.1_10071_3_61	-	639624
Staphylococcus aureus subsp. aureus	46170	PRJNA288104	288104	Terrabacteria group	Firmicutes	2.91272	32.7	-	LFVD01	29	3079	2959	11/25/15	3/5/17	Contig	"Genomic Research Laboratory, GRL; Geneva University Hospital, HUG  "	SAMN03793209	GCA_001448255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/255/GCA_001448255.1_ASM144825v1	26464204	MRSA_S12
Staphylococcus aureus subsp. aureus	46170	PRJNA288117	288117	Terrabacteria group	Firmicutes	2.92331	32.7	-	LFVQ01	29	3080	2956	11/25/15	3/5/17	Contig	"Genomic Research Laboratory, GRL; Geneva University Hospital, HUG  "	SAMN03793222	GCA_001448285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/285/GCA_001448285.1_ASM144828v1	26464204	MRSA_S28
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70003	52.1	-	CIQJ01	41	4859	4513	3/21/15	2/27/17	Scaffold	SC	SAMEA2056195	GCA_001080425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/425/GCA_001080425.1_10071_3_36	-	241454
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.15034	50.5	-	NLQK01	315	5532	5124	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279557	GCA_002231265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/265/GCA_002231265.1_ASM223126v1	-	MOD1-EC5221
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3676	65.6	-	FQOP01	87	4272	4080	11/25/16	3/14/17	Scaffold	SC	SAMEA2683048	GCA_900127365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/365/GCA_900127365.1_14722_8_29	-	2926STDY5723801
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.22942	39.8	-	CFGT01	78	2394	2081	3/15/15	3/15/17	Scaffold	SC	SAMEA1025033	GCA_001339755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/755/GCA_001339755.1_6730_8_17	-	SMRU737
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07154	39.5	-	CHQT01	61	2319	2062	4/21/15	3/5/17	Scaffold	SC	SAMEA1025035	GCA_001339775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/775/GCA_001339775.1_6730_7_1	-	SMRU697
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3691	65.6	-	FQOH01	86	4272	4069	11/25/16	3/14/17	Scaffold	SC	SAMEA2683113	GCA_900127375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/375/GCA_900127375.1_14722_8_82	-	2926STDY5723867
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.98698	50.6	-	NLQL01	176	5081	4756	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279555	GCA_002231315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/315/GCA_002231315.1_ASM223131v1	-	MOD1-EC5219
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93262	51.8	-	CITH01	53	5117	4746	3/21/15	2/27/17	Scaffold	SC	SAMEA2064166	GCA_001080445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/445/GCA_001080445.1_10071_8_63	-	2010K-0552
Staphylococcus aureus subsp. aureus	46170	PRJNA288115	288115	Terrabacteria group	Firmicutes	2.85239	32.7	-	LFVO01	26	2984	2870	11/25/15	3/5/17	Contig	"Genomic Research Laboratory, GRL; Geneva University Hospital, HUG  "	SAMN03793220	GCA_001448305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/305/GCA_001448305.1_ASM144830v1	26464204	MRSA_S24
Staphylococcus aureus subsp. aureus	46170	PRJNA288105	288105	Terrabacteria group	Firmicutes	2.85184	32.7	-	LFVE01	30	2995	2866	11/25/15	3/5/17	Contig	"Genomic Research Laboratory, GRL; Geneva University Hospital, HUG  "	SAMN03793210	GCA_001448325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/325/GCA_001448325.1_ASM144832v1	26464204	MRSA_S13
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72322	52	-	CIOB01	46	4883	4514	3/21/15	2/27/17	Scaffold	SC	SAMEA2058818	GCA_001080505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/505/GCA_001080505.1_10060_5_87	-	1102
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.83788	50.6	-	NLSB01	85	4838	4610	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04448447	GCA_002231325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/325/GCA_002231325.1_ASM223132v1	-	MOD1-EC5113
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36441	65.6	-	FQNT01	64	4278	4087	11/25/16	3/14/17	Scaffold	SC	SAMEA2682878	GCA_900127385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/385/GCA_900127385.1_14893_2_3	-	2926STDY5723630
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.1531	39.7	-	CHQN01	70	2330	2064	4/21/15	3/6/17	Scaffold	SC	SAMEA1025036	GCA_001339795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/795/GCA_001339795.1_6730_6_15	-	SMRU687
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12696	39.6	-	CFCU01	44	2358	2123	3/15/15	3/5/17	Scaffold	SC	SAMEA1025039	GCA_001339815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/815/GCA_001339815.1_6730_4_23	-	SMRU647
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37748	65.6	-	FQOF01	70	4277	4097	11/25/16	3/14/17	Scaffold	SC	SAMEA2682958	GCA_900127395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/395/GCA_900127395.1_14893_2_64	-	2926STDY5723711
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.12256	50.7	-	NLQP01	241	5445	4965	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279547	GCA_002231355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/355/GCA_002231355.1_ASM223135v1	-	MOD1-EC5213
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72317	52	-	CIUK01	39	4887	4525	3/21/15	2/27/17	Scaffold	SC	SAMEA2067732	GCA_001080625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/625/GCA_001080625.1_10071_8_95	-	2010K-0514
Staphylococcus aureus subsp. aureus	46170	PRJNA288112	288112	Terrabacteria group	Firmicutes	2.90772	32.6	-	LFVL01	36	3048	2916	11/25/15	3/5/17	Contig	"Genomic Research Laboratory, GRL; Geneva University Hospital, HUG  "	SAMN03793217	GCA_001448345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/345/GCA_001448345.1_ASM144834v1	26464204	MRSA_S21
Staphylococcus aureus MRSA_CVMN27231PS	1387328	PRJNA215417	215417	Terrabacteria group	Firmicutes	2.87192	32.6	-	AYXX01	69	3032	2890	11/30/15	3/5/17	Contig	"US Food and Drug Administration, Center for Veterinary Medicine"	SAMN02404771	GCA_001453965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/965/GCA_001453965.1_ASM145396v1	-	MRSA_CVMN27231PS
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7207	52	-	CISW01	45	4869	4514	3/21/15	2/27/17	Scaffold	SC	SAMEA2067637	GCA_001080645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/645/GCA_001080645.1_10071_8_44	-	Gen-0044
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.83079	50.5	-	NLSA01	501	6230	5720	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04448469	GCA_002231365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/365/GCA_002231365.1_ASM223136v1	-	MOD1-EC5114
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.38468	65.6	-	FQOK01	74	4284	4101	11/25/16	3/14/17	Scaffold	SC	SAMEA2683076	GCA_900127405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/405/GCA_900127405.1_14722_8_51	-	2926STDY5723830
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.03475	39.7	-	CHSV01	87	2188	1994	4/21/15	3/5/17	Scaffold	SC	SAMEA1025047	GCA_001339835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/835/GCA_001339835.1_6731_6_19	-	SMRU1123
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.2226	39.4	-	CICD01	75	2450	2204	4/21/15	3/11/17	Scaffold	SC	SAMEA1025048	GCA_001339855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/855/GCA_001339855.1_6755_4_10	-	SMRU1138
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36577	65.6	-	FQOX01	89	4271	4072	11/25/16	3/14/17	Scaffold	SC	SAMEA2683038	GCA_900127415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/415/GCA_900127415.1_14722_8_19	-	2926STDY5723791
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.08174	50.7	-	NLQQ01	338	5211	4894	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279546	GCA_002231395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/395/GCA_002231395.1_ASM223139v1	-	MOD1-EC5212
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73289	52	-	CINS01	50	4889	4539	3/21/15	2/27/17	Scaffold	SC	SAMEA2055786	GCA_001080685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/685/GCA_001080685.1_10060_5_11	-	A149
Staphylococcus aureus MRSA_CVMN25720PS	1387326	PRJNA215415	215415	Terrabacteria group	Firmicutes	2.73647	32.7	-	AYXV01	32	2825	2704	11/30/15	3/5/17	Contig	"US Food and Drug Administration, Center for Veterinary Medicine"	SAMN02404769	GCA_001453975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/975/GCA_001453975.1_ASM145397v1	-	MRSA_CVMN25720PS
Staphylococcus aureus MRSA_CVMN26035PS	1387327	PRJNA215416	215416	Terrabacteria group	Firmicutes	2.89379	32.7	-	AYXW01	28	3052	2932	11/30/15	3/5/17	Contig	"US Food and Drug Administration, Center for Veterinary Medicine"	SAMN02404770	GCA_001453995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/453/995/GCA_001453995.1_ASM145399v1	-	MRSA_CVMN26035PS
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73305	52.1	-	CIPZ01	97	4920	4550	3/21/15	2/27/17	Scaffold	SC	SAMEA2058824	GCA_001080705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/705/GCA_001080705.1_10071_3_10	-	TY068
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.25548	50.8	-	NLRZ01	229	5507	5125	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279448	GCA_002231405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/405/GCA_002231405.1_ASM223140v1	-	MOD1-EC5115
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3669	65.6	-	FQOY01	89	4273	4079	11/25/16	3/14/17	Scaffold	SC	SAMEA2683140	GCA_900127425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/425/GCA_900127425.1_14722_8_92	-	2926STDY5723894
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.13476	39.6	-	CFCV01	73	2391	2154	3/15/15	3/11/17	Scaffold	SC	SAMEA1025061	GCA_001339935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/935/GCA_001339935.1_6730_6_14	-	SMRU686
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11407	39.5	-	CFFM01	48	2334	2106	3/15/15	3/11/17	Scaffold	SC	SAMEA1025070	GCA_001339995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/995/GCA_001339995.1_6730_1_15	-	SMRU591
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.32611	65.6	-	FQOG01	60	4244	4059	11/25/16	3/14/17	Scaffold	SC	SAMEA2682829	GCA_900127435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/435/GCA_900127435.1_14892_2_29	-	2926STDY5723580
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.82675	50.7	-	NLQR01	179	5044	4671	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279545	GCA_002231415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/415/GCA_002231415.1_ASM223141v1	-	MOD1-EC5211
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72089	52	-	CIMZ01	47	4885	4525	3/21/15	2/27/17	Scaffold	SC	SAMEA2056945	GCA_001080725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/725/GCA_001080725.1_10060_5_70	-	B1357
Staphylococcus aureus	1280	PRJNA301776	301776	Terrabacteria group	Firmicutes	2.88838	32.8	-	LNDF01	87	3037	2811	12/3/15	3/5/17	Contig	Korea Food Research Institute	SAMN04259794	GCA_001455935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/935/GCA_001455935.1_ASM145593v1	-	KS101Sa
Staphylococcus aureus	1280	PRJNA303158	303158	Terrabacteria group	Firmicutes	2.80533	32.9	-	LNTF01	20	2886	2707	12/3/15	3/5/17	Contig	School of Veterinary Medicine and Animal Science / University of Sao Paulo	SAMN04287217	GCA_001455955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/955/GCA_001455955.1_ASM145595v1	-	SA7112
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.6999	52.1	-	CIQZ01	41	4863	4508	3/21/15	2/27/17	Scaffold	SC	SAMEA2057116	GCA_001080805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/805/GCA_001080805.1_10071_3_65	-	671445
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.77148	50.8	-	NLQS01	174	4996	4626	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279544	GCA_002231445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/445/GCA_002231445.1_ASM223144v1	-	MOD1-EC5210
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36057	65.6	-	FQOV01	78	4266	4074	11/25/16	3/14/17	Scaffold	SC	SAMEA2683037	GCA_900127445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/445/GCA_900127445.1_14722_8_18	-	2926STDY5723790
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.03481	39.7	-	CHRE01	78	2236	2023	4/21/15	3/11/17	Scaffold	SC	SAMEA1025071	GCA_001340015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/015/GCA_001340015.1_6731_3_7	-	SMRU1039
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.19471	39.5	-	CHQH01	89	2455	2212	4/21/15	3/11/17	Scaffold	SC	SAMEA1025088	GCA_001340055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/055/GCA_001340055.1_6731_1_17	-	SMRU1001
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37123	65.6	-	FQOJ01	67	4281	4082	11/25/16	3/14/17	Scaffold	SC	SAMEA2682996	GCA_900127455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/455/GCA_900127455.1_14892_2_84	-	2926STDY5723749
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.75596	50.8	-	NLQT01	185	4990	4619	7/25/17	8/1/17	Contig	FDA/CFSAN	SAMN04279543	GCA_002231475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/475/GCA_002231475.1_ASM223147v1	-	MOD1-EC5209
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72127	52	-	CISO01	43	4879	4523	3/21/15	2/27/17	Scaffold	SC	SAMEA2066183	GCA_001080825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/825/GCA_001080825.1_10071_8_34	-	Gen-0034
Staphylococcus aureus subsp. aureus	46170	PRJNA288096	288096	Terrabacteria group	Firmicutes	2.89002	32.5915	plasmid pSAHUG_S5a:NZ_CM003617.1/CM003617.1; plasmid pSAHUG_S5b:NZ_CM003618.1/CM003618.1	LFUX01	28	3031	2904	11/25/15	3/5/17	Contig	"Genomic Research Laboratory, GRL; Geneva University Hospital, HUG  "	SAMN03793203	GCA_001457095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/095/GCA_001457095.1_ASM145709v1	26464204	MRSA_S5
Staphylococcus aureus subsp. aureus	46170	PRJNA288094	288094	Terrabacteria group	Firmicutes	2.86255	32.667	plasmid pHUGS2:NZ_CM003619.1/CM003619.1	LFUV01	25	2912	2849	11/25/15	12/9/15	Contig	"Genomic Research Laboratory, GRL; Geneva University Hospital, HUG  "	SAMN03793201	GCA_001457105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/105/GCA_001457105.1_ASM145710v1	26464204	MRSA_S2
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72386	52	-	CIOV01	51	4879	4516	3/21/15	2/27/17	Scaffold	SC	SAMEA2056702	GCA_001080865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/865/GCA_001080865.1_10060_6_33	-	UI16704
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.83148	50.7	-	NLRD01	152	5013	4689	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279527	GCA_002231485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/485/GCA_002231485.1_ASM223148v1	-	MOD1-EC5188
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35644	65.6	-	FQOA01	90	4271	4070	11/25/16	3/14/17	Scaffold	SC	SAMEA2683131	GCA_900127465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/465/GCA_900127465.1_14722_8_90	-	2926STDY5723885
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11258	39.7	-	CFFH01	56	2266	1980	3/15/15	3/11/17	Scaffold	SC	SAMEA1025096	GCA_001340095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/095/GCA_001340095.1_6730_1_18	-	SMRU594
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.11375	39.5	-	CGWT01	67	2319	2102	4/21/15	3/11/17	Scaffold	SC	SAMEA1025098	GCA_001340115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/115/GCA_001340115.1_6731_3_4	-	SMRU1036
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3919	65.6	-	FQNZ01	78	4302	4111	11/25/16	3/14/17	Scaffold	SC	SAMEA2682980	GCA_900127475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/475/GCA_900127475.1_14893_2_71	-	2926STDY5723733
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.68868	50.9	-	NLRE01	111	4815	4555	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279526	GCA_002231495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/495/GCA_002231495.1_ASM223149v1	-	MOD1-EC5187
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74171	52.1	-	CIOI01	41	4918	4565	3/21/15	2/27/17	Scaffold	SC	SAMEA2056698	GCA_001080885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/885/GCA_001080885.1_10060_6_21	-	UI11483
Staphylococcus aureus subsp. aureus	46170	PRJNA288092	288092	Terrabacteria group	Firmicutes	2.86149	32.6677	plasmid pHUGS1:NZ_CM003616.1/CM003616.1	LFUU01	25	3003	2884	11/25/15	3/5/17	Contig	"Genomic Research Laboratory, GRL; Geneva University Hospital, HUG  "	SAMN03793200	GCA_001457115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/115/GCA_001457115.1_ASM145711v1	26464204	MRSA_S1
Staphylococcus aureus subsp. aureus	46170	PRJNA288107	288107	Terrabacteria group	Firmicutes	2.83148	32.6625	plasmid pSAHUG_S15a:NZ_CM003620.1/CM003620.1; plasmid pSAHUG_S15b:NZ_CM003621.1/CM003621.1	LFVG01	27	2963	2846	11/25/15	3/5/17	Contig	"Genomic Research Laboratory, GRL; Geneva University Hospital, HUG  "	SAMN03793212	GCA_001457125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/125/GCA_001457125.1_ASM145712v1	26464204	MRSA_S15
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.68438	52.1	-	CIQX01	41	4836	4482	3/21/15	2/27/17	Scaffold	SC	SAMEA2057113	GCA_001080925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/925/GCA_001080925.1_10071_3_56	-	540614
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.09328	50.5	-	NLRR01	166	5186	4834	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279511	GCA_002231535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/535/GCA_002231535.1_ASM223153v1	-	MOD1-EC5172
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3707	65.6	-	FQON01	67	4260	4083	11/25/16	3/14/17	Scaffold	SC	SAMEA2682697	GCA_900127485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/485/GCA_900127485.1_14722_7_46	-	2926STDY5723447
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.16199	39.5	-	CGWN01	65	2384	2150	4/21/15	3/11/17	Scaffold	SC	SAMEA1025110	GCA_001340195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/195/GCA_001340195.1_6710_8_14	-	SMRU1406
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.19922	39.7	-	CFBG01	98	2378	2088	3/15/15	3/11/17	Scaffold	SC	SAMEA1025116	GCA_001340255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/255/GCA_001340255.1_6805_4_12	-	SMRU1668
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36638	65.6	-	FQOM01	69	4263	4088	11/25/16	3/14/17	Scaffold	SC	SAMEA2682910	GCA_900127495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/495/GCA_900127495.1_14893_2_29	-	2926STDY5723662
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.1259	50.7	-	NLQV01	218	5456	5076	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279540	GCA_002231555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/555/GCA_002231555.1_ASM223155v1	-	MOD1-EC5204
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71833	52	-	CITB01	38	4870	4523	3/21/15	2/27/17	Scaffold	SC	SAMEA2067573	GCA_001080945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/945/GCA_001080945.1_10071_8_5	-	Gen-0005
Staphylococcus aureus subsp. aureus	46170	PRJNA288110	288110	Terrabacteria group	Firmicutes	2.83063	32.6634	plasmid pSAHUG_S19a:NZ_CM003623.1/CM003623.1; plasmid pSAHUG_S19b:NZ_CM003624.1/CM003624.1	LFVJ01	25	2965	2848	11/25/15	3/5/17	Contig	"Genomic Research Laboratory, GRL; Geneva University Hospital, HUG  "	SAMN03793215	GCA_001457175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/175/GCA_001457175.1_ASM145717v1	26464204	MRSA_S19
Staphylococcus aureus subsp. aureus	46170	PRJNA288111	288111	Terrabacteria group	Firmicutes	2.94733	32.6825	plasmid pSAHUG_S20a:NZ_CM003622.1/CM003622.1	LFVK01	31	3117	2982	11/25/15	3/5/17	Contig	"Genomic Research Laboratory, GRL; Geneva University Hospital, HUG  "	SAMN03793216	GCA_001457185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/185/GCA_001457185.1_ASM145718v1	26464204	MRSA_S20
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69981	52.1	-	CIRE01	41	4848	4499	3/21/15	2/27/17	Scaffold	SC	SAMEA2059035	GCA_001080965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/080/965/GCA_001080965.1_10071_3_67	-	338900
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.15573	50.6	-	NLQU01	227	5457	5047	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04448475	GCA_002231565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/565/GCA_002231565.1_ASM223156v1	-	MOD1-EC5206
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36991	65.6	-	FQNR01	81	4280	4089	11/25/16	3/14/17	Scaffold	SC	SAMEA2682818	GCA_900127515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/515/GCA_900127515.1_14892_2_23	-	2926STDY5723569
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.18565	39.4	-	CGXE01	113	2413	2174	4/21/15	3/11/17	Scaffold	SC	SAMEA1025119	GCA_001340295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/295/GCA_001340295.1_6753_4_10	-	SMRU1546
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.28172	39.5	-	CGXH01	93	2499	2248	4/21/15	3/11/17	Scaffold	SC	SAMEA1025120	GCA_001340315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/315/GCA_001340315.1_6755_5_17	-	SMRU1169
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37272	65.6	-	FQOB01	70	4289	4098	11/25/16	3/14/17	Scaffold	SC	SAMEA2682991	GCA_900127525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/525/GCA_900127525.1_14892_2_80	-	2926STDY5723744
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.26572	50.6	-	NLQW01	247	5599	5180	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279539	GCA_002231575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/575/GCA_002231575.1_ASM223157v1	-	MOD1-EC5203
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74227	52.1	-	CIPB01	43	4925	4563	3/21/15	2/27/17	Scaffold	SC	SAMEA2056706	GCA_001081025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/025/GCA_001081025.1_10060_6_45	-	UI3816
Staphylococcus aureus subsp. aureus	46170	PRJNA288116	288116	Terrabacteria group	Firmicutes	2.84841	32.6676	plasmid pSAHUG_S26a:NZ_CM003625.1/CM003625.1	LFVP01	26	2989	2868	11/25/15	3/5/17	Contig	"Genomic Research Laboratory, GRL; Geneva University Hospital, HUG  "	SAMN03793221	GCA_001457195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/457/195/GCA_001457195.1_ASM145719v1	26464204	MRSA_S26
Staphylococcus aureus	1280	PRJNA248197	248197	Terrabacteria group	Firmicutes	2.93777	32.7	-	JWHZ01	309	3052	2900	12/17/15	3/5/17	Contig	South American MRSA Consortium	SAMN02795937	GCA_001468765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/468/765/GCA_001468765.1_ASM146876v1	-	25-May
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93186	51.8	-	CITU01	54	5126	4752	3/21/15	2/27/17	Scaffold	SC	SAMEA2067723	GCA_001081065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/065/GCA_001081065.1_10071_8_68	-	2010K-0512
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.11654	50.5	-	NLRO01	204	5432	5088	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279514	GCA_002231615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/615/GCA_002231615.1_ASM223161v1	-	MOD1-EC5175
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35783	65.6	-	FQOU01	92	4284	4076	11/25/16	3/14/17	Scaffold	SC	SAMEA2682988	GCA_900127535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/535/GCA_900127535.1_14893_2_78	-	2926STDY5723741
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.18297	39.5	-	CHOV01	71	2436	2186	4/21/15	3/14/17	Scaffold	SC	SAMEA1025121	GCA_001340335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/335/GCA_001340335.1_6710_6_14	-	SMRU1358
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10213	39.6	-	CFBU01	49	2320	2104	3/15/15	3/11/17	Scaffold	SC	SAMEA1025130	GCA_001340375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/375/GCA_001340375.1_6753_2_15	-	SMRU1504
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36814	65.6	-	FQOT01	69	4276	4093	11/25/16	3/14/17	Scaffold	SC	SAMEA2682752	GCA_900127545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/545/GCA_900127545.1_14722_7_83	-	2926STDY5723502
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.6171	50.9	-	NLRL01	85	4742	4501	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279517	GCA_002231635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/635/GCA_002231635.1_ASM223163v1	-	MOD1-EC5178
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.68346	52.1	-	CIRX01	55	4826	4476	3/21/15	2/27/17	Scaffold	SC	SAMEA2059205	GCA_001081165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/165/GCA_001081165.1_10071_3_91	-	A135
Staphylococcus aureus	1280	PRJNA298488	298488	Terrabacteria group	Firmicutes	2.68232	32.7	-	LNOO01	92	2799	2580	12/17/15	3/5/17	Contig	Universidade Federal de Vicosa	SAMN04191397	GCA_001469015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/015/GCA_001469015.1_ASM146901v1	26893417	1269
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.87693	32.6	-	LMZC01	285	3098	2898	12/18/15	3/5/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940721	GCA_001469995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/995/GCA_001469995.1_ASM146999v1	-	UC50
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69985	52.1	-	CIQF01	44	4857	4504	3/21/15	3/2/17	Scaffold	SC	SAMEA2057107	GCA_001081205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/205/GCA_001081205.1_10071_3_32	-	206926
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.11058	50.4	-	NLRN01	124	5319	4901	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279515	GCA_002231645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/645/GCA_002231645.1_ASM223164v1	-	MOD1-EC5176
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36676	65.6	-	FQOW01	68	4264	4077	11/25/16	3/14/17	Scaffold	SC	SAMEA2682979	GCA_900127555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/555/GCA_900127555.1_14892_2_76	-	2926STDY5723732
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12581	39.6	-	CIBY01	64	2344	2120	4/21/15	3/11/17	Scaffold	SC	SAMEA1025143	GCA_001340415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/415/GCA_001340415.1_6753_4_9	-	SMRU1545
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.24948	39.1	-	CGYA01	113	2462	2237	4/21/15	3/11/17	Scaffold	SC	SAMEA1025149	GCA_001340435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/435/GCA_001340435.1_6807_2_5	-	SMRU1589
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.36642	65.6	-	FQNV01	57	4261	4072	11/25/16	3/14/17	Scaffold	SC	SAMEA2682869	GCA_900127565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/565/GCA_900127565.1_14892_2_41	-	2926STDY5723621
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.9913	50.6	-	NLQX01	203	5232	4829	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279537	GCA_002231655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/655/GCA_002231655.1_ASM223165v1	-	MOD1-EC5199
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7204	52	-	CIRO01	40	4875	4520	3/21/15	3/2/17	Scaffold	SC	SAMEA2067630	GCA_001081265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/265/GCA_001081265.1_10071_8_23	-	Gen-0023
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.90118	32.8	-	LORT01	3	3055	2861	12/21/15	3/5/17	Contig	US Food and Drug Administration 	SAMN03996293	GCA_001471675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/675/GCA_001471675.1_ASM147167v1	-	FDAARGOS_169
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	3.08515	32.7	-	LOSC01	6	3314	3082	12/21/15	3/5/17	Contig	US Food and Drug Administration 	SAMN03996279	GCA_001471695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/695/GCA_001471695.1_ASM147169v1	-	FDAARGOS_135
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73928	52	-	CIOD01	46	4903	4543	3/21/15	3/2/17	Scaffold	SC	SAMEA1972328	GCA_001081285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/285/GCA_001081285.1_10060_5_94	-	1707
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.06675	50.5	-	NLQY01	213	5255	4870	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04448470	GCA_002231695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/695/GCA_002231695.1_ASM223169v1	-	MOD1-EC5196
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.3245	65.6	-	FQOL01	67	4246	4075	11/25/16	3/14/17	Scaffold	SC	SAMEA2682802	GCA_900127585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/585/GCA_900127585.1_14722_6_51	-	2926STDY5723553
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.04094	39.7	-	CHHK01	58	2244	2033	4/21/15	3/11/17	Scaffold	SC	SAMEA1025158	GCA_001340455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/455/GCA_001340455.1_6805_4_10	-	SMRU1666
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.00607	39.7	-	CFEL01	59	2181	1959	3/15/15	3/11/17	Scaffold	SC	SAMEA1025165	GCA_001340475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/475/GCA_001340475.1_6830_3_8	-	SMRU1640
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37396	65.6	-	FQOZ01	76	4273	4083	11/25/16	3/14/17	Scaffold	SC	SAMEA2683056	GCA_900127595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/595/GCA_900127595.1_14893_2_92	-	2926STDY5723810
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.01584	50.7	-	NLRF01	182	5238	4901	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279525	GCA_002231715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/715/GCA_002231715.1_ASM223171v1	-	MOD1-EC5186
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9339	51.8	-	CITN01	57	5139	4747	3/21/15	2/27/17	Scaffold	SC	SAMEA2067727	GCA_001081305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/305/GCA_001081305.1_10071_8_80	-	2010K-0500
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.91328	32.8	-	LOSB01	4	3076	2913	12/21/15	3/5/17	Contig	US Food and Drug Administration 	SAMN03996284	GCA_001471715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/715/GCA_001471715.1_ASM147171v1	-	FDAARGOS_140
Staphylococcus aureus subsp. aureus NBRC 100910	1223492	PRJDB418	173137	Terrabacteria group	Firmicutes	2.72323	32.7	-	BCPX01	23	2815	2725	1/26/16	3/5/17	Contig	National Institute of Technology and Evaluation	SAMD00045736	GCA_001544175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/544/175/GCA_001544175.1_ASM154417v1	-	NBRC 100910
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73338	52	-	CINN01	54	4887	4536	3/21/15	2/27/17	Scaffold	SC	SAMEA2058808	GCA_001081325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/325/GCA_001081325.1_10060_5_54	-	A266
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.75446	50.7	-	NLRG01	167	5026	4618	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279524	GCA_002231725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/725/GCA_002231725.1_ASM223172v1	-	MOD1-EC5185
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37583	65.6	-	FQPA01	70	4270	4098	11/25/16	3/14/17	Scaffold	SC	SAMEA2683059	GCA_900127605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/605/GCA_900127605.1_14893_2_93	-	2926STDY5723813
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07173	39.5	-	CGXY01	54	2277	2033	4/21/15	3/11/17	Scaffold	SC	SAMEA1025168	GCA_001340495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/495/GCA_001340495.1_6805_5_24	-	35C
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.17437	39.5	-	CIBZ01	52	2416	2191	4/21/15	3/11/17	Scaffold	SC	SAMEA1025171	GCA_001340535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/535/GCA_001340535.1_6753_2_13	-	SMRU1502
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.35644	65.6	-	FQPB01	69	4257	4078	11/25/16	3/14/17	Scaffold	SC	SAMEA2683146	GCA_900127615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/615/GCA_900127615.1_14893_3_65	-	2926STDY5723900
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.9205	50.7	-	NLRH01	146	5058	4714	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279521	GCA_002231735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/735/GCA_002231735.1_ASM223173v1	-	MOD1-EC5182
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70051	52.1	-	CIQO01	40	4849	4502	3/21/15	2/27/17	Scaffold	SC	SAMEA2059026	GCA_001081405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/405/GCA_001081405.1_10071_3_37	-	257401
Staphylococcus aureus	1280	PRJNA311497	311497	Terrabacteria group	Firmicutes	2.71531	32.8	-	LSMV01	74	2797	2639	2/23/16	3/5/17	Contig	Universite d'Auvergne	SAMN04482515	GCA_001566905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/905/GCA_001566905.1_ASM156690v1	27081139	HUK16
Staphylococcus aureus	1280	PRJNA310666	310666	Terrabacteria group	Firmicutes	2.76249	32.7	-	LSBC01	83	2853	2735	4/5/16	3/6/17	Contig	"Nanshan Hospital of Guangdong Medical College, Shenzhen, China"	SAMN04453254	GCA_001611455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/455/GCA_001611455.1_ASM161145v1	-	N315-T40-1
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72031	52	-	CINC01	41	4873	4528	3/21/15	2/27/17	Scaffold	SC	SAMEA2056944	GCA_001081425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/425/GCA_001081425.1_10060_5_67	-	B1271
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.77273	50.7	-	NLRI01	140	4888	4603	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279520	GCA_002231775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/775/GCA_002231775.1_ASM223177v1	-	MOD1-EC5181
Mycobacterium tuberculosis	1773	PRJEB5280	247745	Terrabacteria group	Actinobacteria	4.37455	65.6	-	FQPF01	85	4290	4088	11/25/16	3/14/17	Scaffold	SC	SAMEA2683147	GCA_900127625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/625/GCA_900127625.1_14893_3_66	-	2926STDY5723902
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10662	39.5	-	CFBP01	44	2325	2100	3/15/15	3/11/17	Scaffold	SC	SAMEA1025177	GCA_001340575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/575/GCA_001340575.1_6710_6_10	-	SMRU1354
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.03475	39.7	-	CIHT01	56	2238	2023	4/21/15	3/11/17	Scaffold	SC	SAMEA1025179	GCA_001340595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/595/GCA_001340595.1_6753_2_4	-	SMRU1492
Mycoplasma capricolum subsp. capripneumoniae 87001	1124992	PRJNA78705	78705	Terrabacteria group	Tenericutes	1.01733	23.7	chromosome:NZ_CP006959.1/CP006959.1	-	1	914	687	2/10/15	4/3/17	Complete Genome	"NShanghai-MOST Key Laboratory of Health and  Disease Genomics, Chinese National Human Genome Center at Shanghai,  Shanghai, China, No. 250, Bibo Road, Pudong District"	SAMN03275448	GCA_000835085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/835/085/GCA_000835085.1_ASM83508v1	-	87001
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.72922	50.8	-	NLRJ01	139	4895	4612	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279519	GCA_002231785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/785/GCA_002231785.1_ASM223178v1	-	MOD1-EC5180
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7233	52	-	CIOW01	43	4892	4523	3/21/15	3/2/17	Scaffold	SC	SAMEA2056703	GCA_001081525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/525/GCA_001081525.1_10060_6_36	-	UI3398
Staphylococcus aureus	1280	PRJNA310662	310662	Terrabacteria group	Firmicutes	2.76609	32.7	-	LSAO01	70	2841	2736	4/5/16	3/6/17	Contig	"Nanshan Hospital of Guangdong Medical College, Shenzhen, China"	SAMN04453249	GCA_001611465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/465/GCA_001611465.1_ASM161146v1	-	N315-T100-1
Staphylococcus aureus	1280	PRJNA309344	309344	Terrabacteria group	Firmicutes	2.76291	32.7	-	LSAN01	74	2856	2737	4/5/16	3/6/17	Contig	"Nanshan Hospital of Guangdong Medical College, Shenzhen, China"	SAMN04431886	GCA_001611475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/475/GCA_001611475.1_ASM161147v1	-	N315-L100-2
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7437	52.1	-	CIPH01	39	4927	4573	3/21/15	3/2/17	Scaffold	SC	SAMEA2055263	GCA_001081705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/705/GCA_001081705.1_10060_6_59	-	UI5557
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.99181	50.7	-	NLRK01	168	5211	4910	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279518	GCA_002231805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/805/GCA_002231805.1_ASM223180v1	-	MOD1-EC5179
Mycoplasma capricolum subsp. capripneumoniae	40480	PRJEB7065	268808	Terrabacteria group	Tenericutes	1.01718	23.7	chromosome 1:NZ_LN515399.1/LN515399.1	-	1	913	692	9/4/14	4/3/17	Complete Genome	SIB	SAMEA2710682	GCA_000953235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/235/GCA_000953235.1_ILRI181.1	-	ILRI181
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.05519	39.7	-	CHTM01	62	2256	2050	4/21/15	3/11/17	Scaffold	SC	SAMEA1025180	GCA_001340615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/615/GCA_001340615.1_6753_4_5	-	SMRU1541
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.18984	39.7	-	CHSX01	99	2384	2139	4/21/15	3/11/17	Scaffold	SC	SAMEA1025182	GCA_001340635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/635/GCA_001340635.1_6736_5_19	-	SMRU1243
Mycoplasma capricolum subsp. capripneumoniae	40480	PRJEB7064	259281	Terrabacteria group	Tenericutes	1.01676	23.7	chromosome 1:NZ_LN515398.1/LN515398.1	-	1	915	703	8/27/14	4/3/17	Complete Genome	SIB	SAMEA2710297	GCA_000953375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/375/GCA_000953375.1_F38.1	-	type strain: F38 = NCTC 10192
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.83396	50.8	-	NLRS01	109	4964	4639	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279510	GCA_002231825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/825/GCA_002231825.1_ASM223182v1	-	MOD1-EC5171
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73864	52	-	CIMW01	48	4893	4543	3/21/15	2/27/17	Scaffold	SC	SAMEA2056802	GCA_001081745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/745/GCA_001081745.1_10060_5_13	-	A153
Staphylococcus aureus	1280	PRJNA310667	310667	Terrabacteria group	Firmicutes	2.74438	32.7	-	LSBD01	90	2815	2673	4/5/16	3/6/17	Contig	"Nanshan Hospital of Guangdong Medical College, Shenzhen, China"	SAMN04453255	GCA_001611485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/485/GCA_001611485.1_ASM161148v1	-	MS4-T10
Staphylococcus aureus	1280	PRJNA310668	310668	Terrabacteria group	Firmicutes	2.75119	32.7	-	LSBE01	74	2863	2679	4/5/16	3/6/17	Contig	"Nanshan Hospital of Guangdong Medical College, Shenzhen, China"	SAMN04453256	GCA_001611535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/535/GCA_001611535.1_ASM161153v1	-	MS4-T60
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71916	52	-	CISY01	46	4877	4514	3/21/15	2/27/17	Scaffold	SC	SAMEA2064161	GCA_001081765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/765/GCA_001081765.1_10071_8_48	-	Gen-0048
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.92103	50.7	-	NLRT01	131	5073	4796	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279460	GCA_002231855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/855/GCA_002231855.1_ASM223185v1	-	MOD1-EC5122
Mycoplasma capricolum subsp. capripneumoniae	40480	PRJEB6140	251370	Terrabacteria group	Tenericutes	1.01729	23.7	chromosome I:NZ_LM995445.1/LM995445.1	-	1	915	705	8/15/14	4/3/17	Complete Genome	CIRAD	SAMEA2547818	GCA_000952915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/915/GCA_000952915.1_9231-Abomsa_assembly_V8	-	9231-Abomsa
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.15415	39.7	-	CHTK01	62	2333	2068	4/21/15	3/11/17	Scaffold	SC	SAMEA1025184	GCA_001340675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/675/GCA_001340675.1_6736_6_4	-	SMRU1252
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.04366	39.7	-	CHQK01	56	2240	2038	4/21/15	3/11/17	Scaffold	SC	SAMEA1025185	GCA_001340695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/695/GCA_001340695.1_6710_8_9	-	SMRU1401
Candidatus Sulcia muelleri	336810	PRJNA385868	385868	FCB group	Bacteroidetes/Chlorobi group	0.218034	23	chromosome:NZ_CP021172.1/CP021172.1	-	1	239	198	8/8/17	8/10/17	Complete Genome	University of Hawaii	SAMN06919536	GCA_002243425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/425/GCA_002243425.1_ASM224342v1	28854637	ENCA
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.10942	50.5	-	NLRU01	301	5409	5049	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279454	GCA_002231865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/865/GCA_002231865.1_ASM223186v1	-	MOD1-EC5121
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93344	51.8	-	CIUC01	51	5134	4746	3/21/15	3/2/17	Scaffold	SC	SAMEA2066346	GCA_001081865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/865/GCA_001081865.1_10071_8_82	-	2010K-0554
Staphylococcus aureus	1280	PRJNA310398	310398	Terrabacteria group	Firmicutes	2.76329	32.7	-	LSBF01	71	2840	2728	4/5/16	3/6/17	Contig	"Nanshan Hospital of Guangdong Medical College, Shenzhen, China"	SAMN04451930	GCA_001611545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/545/GCA_001611545.1_ASM161154v1	-	N315-L100-3
Staphylococcus aureus	1280	PRJNA269675	269675	Terrabacteria group	Firmicutes	2.80208	32.7	-	LWRA01	75	2935	2719	4/29/16	3/6/17	Contig	SRCAMB	SAMN04599376	GCA_001639185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/185/GCA_001639185.1_ASM163918v1	-	SCPM-O-B-7738
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71786	52.1	-	CIOE01	42	4870	4510	3/21/15	3/2/17	Scaffold	SC	SAMEA2059524	GCA_001081925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/081/925/GCA_001081925.1_10060_6_1	-	LNT757
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.07245	50.7	-	NLRW01	317	5385	4975	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279451	GCA_002231885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/885/GCA_002231885.1_ASM223188v1	-	MOD1-EC5118
Candidatus Sulcia muelleri	336810	PRJNA237783	237783	FCB group	Bacteroidetes/Chlorobi group	0.270029	23	chromosome:CP007234.1	-	1	283	247	3/7/14	3/7/14	Complete Genome	University of Montana	SAMN02571066	GCA_000831465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/465/GCA_000831465.1_ASM83146v1	-	TETUND
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10329	39.6	-	CHGZ01	31	2298	2068	4/21/15	3/11/17	Scaffold	SC	SAMEA1025191	GCA_001340735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/735/GCA_001340735.1_6710_6_9	-	SMRU1353
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.13086	39.6	-	CHUE01	58	2340	2092	4/21/15	3/11/17	Scaffold	SC	SAMEA1025192	GCA_001340755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/755/GCA_001340755.1_6805_3_20	-	SMRU1460
Buchnera aphidicola (Cinara tujafilina)	261317	PRJNA41379	41379	Proteobacteria	Gammaproteobacteria	0.444925	23	chromosome:NC_015662.1/CP001817.1	-	1	427	355	6/9/11	3/14/17	Complete Genome	Instituto Cavanilles Biodiversidad y Biologia evolutiva.Universidad Valencia	SAMN02603413	GCA_000217635.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/217/635/GCA_000217635.1_ASM21763v1	21571878	-
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.90971	50.6	-	NLSE01	119	5086	4830	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279445	GCA_002231915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/915/GCA_002231915.1_ASM223191v1	-	MOD1-EC5109
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82679	52	-	CITC01	44	5018	4658	3/21/15	3/2/17	Scaffold	SC	SAMEA2066336	GCA_001082145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/145/GCA_001082145.1_10071_8_49	-	Gen-0049
Staphylococcus aureus	1280	PRJNA269675	269675	Terrabacteria group	Firmicutes	2.75664	32.7	-	LWRD01	72	2874	2641	4/29/16	3/6/17	Contig	SRCAMB	SAMN04599374	GCA_001639195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/195/GCA_001639195.1_ASM163919v1	-	SCPM-O-B-7779
Staphylococcus aureus	1280	PRJNA269675	269675	Terrabacteria group	Firmicutes	2.79946	32.7	-	LWRB01	94	2935	2696	4/29/16	3/6/17	Contig	SRCAMB	SAMN04599398	GCA_001639205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/205/GCA_001639205.1_ASM163920v1	-	SCPM-O-B-7739
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73261	52.1	-	CIQN01	43	4909	4558	3/21/15	3/2/17	Scaffold	SC	SAMEA2057108	GCA_001082165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/165/GCA_001082165.1_10071_3_35	-	238675
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.18343	50.7	-	NLSF01	304	5498	5043	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279444	GCA_002231925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/925/GCA_002231925.1_ASM223192v1	-	MOD1-EC5108
Candidatus Sulcia muelleri	336810	PRJNA271702	271702	FCB group	Bacteroidetes/Chlorobi group	0.268541	22.7	chromosome:CP010828.1	-	1	258	224	8/21/15	8/21/15	Complete Genome	University of Montana	SAMN03327423	GCA_001272615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/272/615/GCA_001272615.1_ASM127261v1	-	-
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.04184	39.7	-	CHPN01	31	2228	1984	4/21/15	3/11/17	Scaffold	SC	SAMEA1025195	GCA_001340775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/775/GCA_001340775.1_6710_8_10	-	SMRU1402
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08165	39.6	-	CHSH01	50	2298	2075	4/21/15	3/5/17	Scaffold	SC	SAMEA1025209	GCA_001340815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/815/GCA_001340815.1_6736_6_6	-	SMRU1254
Candidatus Sulcia muelleri SMDSEM	595499	PRJNA33829	33829	FCB group	Bacteroidetes/Chlorobi group	0.276984	22.6	chromosome:CP001605.1	-	1	279	242	8/18/09	1/31/14	Complete Genome	University of Arizona	SAMN02604138	GCA_000022945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/022/945/GCA_000022945.1_ASM2294v1	-	SMDSEM
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.95501	50.4	-	NLSJ01	153	5208	4884	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279441	GCA_002231955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/955/GCA_002231955.1_ASM223195v1	-	MOD1-EC5104
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.68208	52.1	-	CIRM01	50	4828	4479	3/21/15	2/27/17	Scaffold	SC	SAMEA2056209	GCA_001082205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/205/GCA_001082205.1_10071_3_84	-	A125
Staphylococcus aureus	1280	PRJNA316797	316797	Terrabacteria group	Firmicutes	2.9632	32.7	-	LWBY01	80	3144	2988	5/25/16	3/6/17	Contig	"Laboratory of Medical Microbiology, University of Antwerpen"	SAMN04621063	GCA_001652205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/205/GCA_001652205.1_ASM165220v1	-	NMR09
Staphylococcus aureus	1280	PRJNA316797	316797	Terrabacteria group	Firmicutes	3.01386	32.7	-	LWAM01	77	3217	3048	5/25/16	3/6/17	Contig	"Laboratory of Medical Microbiology, University of Antwerpen"	SAMN04621061	GCA_001652225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/225/GCA_001652225.1_ASM165222v1	-	NMR07
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7219	52	-	CISU01	44	4875	4523	3/21/15	2/27/17	Scaffold	SC	SAMEA2067636	GCA_001082225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/225/GCA_001082225.1_10071_8_41	-	Gen-0041
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.78675	50.8	-	NLSH01	247	5074	4707	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279442	GCA_002231965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/965/GCA_002231965.1_ASM223196v1	-	MOD1-EC5106
Candidatus Sulcia muelleri	336810	PRJNA255335	255335	FCB group	Bacteroidetes/Chlorobi group	0.244618	22.5	chromosome:CP008986.1	-	1	262	227	9/12/14	1/22/15	Complete Genome	University of Texas at Austin	SAMN03290992	GCA_000754305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/305/GCA_000754305.1_ASM75430v1	-	BGSS
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.05965	39.7	-	CHPC01	48	2269	2056	4/21/15	3/5/17	Scaffold	SC	SAMEA1025219	GCA_001340875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/875/GCA_001340875.1_6710_6_6	-	SMRU1350
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09708	39.6	-	CHHG01	50	2302	2051	4/21/15	3/5/17	Scaffold	SC	SAMEA1025225	GCA_001340895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/895/GCA_001340895.1_6736_6_21	-	SMRU1269
Candidatus Hepatoplasma crinochetorum Av	1427984	PRJNA229465	229465	Terrabacteria group	Tenericutes	0.657101	22.5	chromosome:CP006932.1	-	1	619	582	2/26/14	10/1/14	Complete Genome	"Ecology and Biology of Interactions - UMR 7267, CNRS - Universite Poitiers"	SAMN03081503	GCA_000582535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/582/535/GCA_000582535.1_ASM58253v1	-	Av
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.12808	50.6	-	NLFO01	191	5415	4987	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05439338	GCA_002231995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/231/995/GCA_002231995.1_ASM223199v1	-	MOD1-EC5754
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70008	52.1	-	CIRF01	44	4869	4495	3/21/15	2/27/17	Scaffold	SC	SAMEA2059200	GCA_001082245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/245/GCA_001082245.1_10071_3_70	-	379905
Staphylococcus aureus	1280	PRJNA316797	316797	Terrabacteria group	Firmicutes	3.03484	32.7	-	LWAL01	79	3229	3067	5/25/16	3/6/17	Contig	"Laboratory of Medical Microbiology, University of Antwerpen"	SAMN04621060	GCA_001652285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/285/GCA_001652285.1_ASM165228v1	-	NMR05
Staphylococcus aureus	1280	PRJNA318841	318841	Terrabacteria group	Firmicutes	2.82145	32.7	-	LWMF01	95	2959	2746	5/26/16	3/6/17	Contig	Christian Medical College	SAMN04868782	GCA_001652745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/745/GCA_001652745.1_ASM165274v1	-	VB26276
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73346	52	-	CITR01	44	4894	4533	3/21/15	2/27/17	Scaffold	SC	SAMEA2064165	GCA_001082305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/305/GCA_001082305.1_10071_8_60	-	Gen-0060
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.22985	50.4	-	NLGP01	142	5504	5121	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05440436	GCA_002232055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/055/GCA_002232055.1_ASM223205v1	-	MOD1-EC5726
Mycobacterium tuberculosis	1773	PRJNA222494	222494	Terrabacteria group	Actinobacteria	4.53944	64.7	chromosome:CP008959.1	-	1	3979	3816	7/29/14	7/29/14	Chromosome	Los Alamos National Lab	SAMN02911584	GCA_000735795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/795/GCA_000735795.1_ASM73579v1	-	6A024XDR
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10025	39.6	-	CHSD01	56	2334	2102	4/21/15	3/5/17	Scaffold	SC	SAMEA1025227	GCA_001340915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/915/GCA_001340915.1_6736_6_7	-	SMRU1255
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.02328	39.8	-	CICM01	84	2250	2024	4/21/15	3/5/17	Scaffold	SC	SAMEA1025238	GCA_001340975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/975/GCA_001340975.1_6753_4_6	-	SMRU1542
Mycobacterium tuberculosis	1773	PRJNA222494	222494	Terrabacteria group	Actinobacteria	4.53944	64.5	chromosome:CP008960.1	-	1	3944	3782	7/29/14	7/29/14	Chromosome	Los Alamos National Lab	SAMN02911577	GCA_000735815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/815/GCA_000735815.1_ASM73581v1	-	0B329XDR
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.03934	50.6	-	NLGL01	87	5195	4911	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN05439301	GCA_002232075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/075/GCA_002232075.1_ASM223207v1	-	MOD1-EC5730
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72597	52.1	-	CIPO01	40	4898	4555	3/21/15	2/27/17	Scaffold	SC	SAMEA2059691	GCA_001082345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/345/GCA_001082345.1_10060_6_76	-	129-0177-M
Staphylococcus aureus	1280	PRJNA318844	318844	Terrabacteria group	Firmicutes	2.85608	32.8	-	LWMG01	86	3022	2830	5/26/16	3/6/17	Contig	Christian Medical College	SAMN04868783	GCA_001652785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/785/GCA_001652785.1_ASM165278v1	-	VBV169
Staphylococcus aureus	1280	PRJNA280939	280939	Terrabacteria group	Firmicutes	2.74207	32.7	-	LYXH01	15	2889	2724	6/13/16	3/6/17	Contig	NARIC ABC	SAMN05192646	GCA_001661885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/661/885/GCA_001661885.1_ASM166188v1	-	380/11
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.85126	52	-	CIPX01	59	5059	4678	3/21/15	2/27/17	Scaffold	SC	SAMEA1970590	GCA_001082365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/365/GCA_001082365.1_10071_3_11	-	TY107
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.76472	50.5	-	NLSL01	92	4915	4622	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279439	GCA_002232095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/095/GCA_002232095.1_ASM223209v1	-	MOD1-EC5102
Mycobacterium tuberculosis	1773	PRJNA222494	222494	Terrabacteria group	Actinobacteria	4.53944	64.5	chromosome:CP008961.1	-	1	3946	3803	7/29/14	7/29/14	Chromosome	Los Alamos National Lab	SAMN02911580	GCA_000735835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/835/GCA_000735835.1_ASM73583v1	-	0B259XDR
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.16941	39.4	-	CGYM01	60	2409	2185	4/21/15	3/5/17	Scaffold	SC	SAMEA1025243	GCA_001340995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/995/GCA_001340995.1_6830_3_13	-	SMRU1645
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	1.99989	39.8	-	CHTA01	41	2200	1960	4/21/15	3/5/17	Scaffold	SC	SAMEA1025250	GCA_001341035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/035/GCA_001341035.1_6753_1_21	-	SMRU1485
Mycobacterium tuberculosis	1773	PRJNA222494	222494	Terrabacteria group	Actinobacteria	4.53944	64.2	chromosome:CP008962.1	-	1	3793	3562	7/29/14	7/29/14	Chromosome	Los Alamos National Lab	SAMN02911559	GCA_000735855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/855/GCA_000735855.1_ASM73585v1	-	0B235DS
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.26496	50.4	-	NLUX01	239	5543	5122	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279329	GCA_002232105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/105/GCA_002232105.1_ASM223210v1	-	MOD1-EC5001
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73628	52	-	CIRS01	45	4884	4538	3/21/15	2/27/17	Scaffold	SC	SAMEA2059203	GCA_001082405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/405/GCA_001082405.1_10071_3_85	-	A127
Staphylococcus aureus	1280	PRJNA315778	315778	Terrabacteria group	Firmicutes	2.64799	32.7	-	LVID01	26	2709	2590	6/27/16	3/6/17	Contig	Universidade Federal do Rio de Janeiro	SAMN04570172	GCA_001676955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/955/GCA_001676955.1_ASM167695v1	-	A53
Staphylococcus aureus subsp. aureus	46170	PRJNA285091	285091	Terrabacteria group	Firmicutes	2.95986	32.8	-	LDPC01	60	3138	2957	6/28/16	3/6/17	Contig	LNCC	SAMN03737803	GCA_001677355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/355/GCA_001677355.1_ASM167735v1	-	HC556
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71911	52	-	CING01	44	4857	4512	3/21/15	2/27/17	Scaffold	SC	SAMEA2055906	GCA_001082445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/445/GCA_001082445.1_10060_5_65	-	109520
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.28947	50.7	-	NLUK01	237	5563	5204	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279356	GCA_002232115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/115/GCA_002232115.1_ASM223211v1	-	MOD1-EC5028
Mycobacterium tuberculosis	1773	PRJNA222494	222494	Terrabacteria group	Actinobacteria	4.53944	64.3	chromosome:CP008963.1	-	1	3734	3455	7/29/14	7/29/14	Chromosome	Los Alamos National Lab	SAMN02911560	GCA_000735875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/875/GCA_000735875.1_ASM73587v1	-	0B229DS
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10941	39.5	-	CHUP01	48	2317	2081	4/21/15	3/5/17	Scaffold	SC	SAMEA1025255	GCA_001341055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/055/GCA_001341055.1_6805_5_11	-	SMRU1691
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.25553	39.5	-	CHUK01	83	2478	2217	4/21/15	3/5/17	Scaffold	SC	SAMEA1025264	GCA_001341075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/075/GCA_001341075.1_6805_4_17	-	SMRU1673
Mycobacterium tuberculosis	1773	PRJNA222494	222494	Terrabacteria group	Actinobacteria	4.53944	64.2	chromosome:CP008964.1	-	1	3731	3480	7/29/14	7/29/14	Chromosome	Los Alamos National Lab	SAMN02911561	GCA_000735895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/895/GCA_000735895.1_ASM73589v1	-	0B228DS
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.14295	50.5	-	NLSD01	215	5335	5014	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279447	GCA_002232155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/155/GCA_002232155.1_ASM223215v1	-	MOD1-EC5111
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.67848	52.1	-	CINP01	47	4828	4476	3/21/15	2/27/17	Scaffold	SC	SAMEA1966830	GCA_001082465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/465/GCA_001082465.1_10060_5_23	-	A178
Staphylococcus aureus subsp. aureus	46170	PRJNA269094	269094	Terrabacteria group	Firmicutes	2.98701	32.7946	plasmid pSA93A:NZ_CM004484.1/CM004484.1	JWMH01	36	3196	2966	7/5/16	9/22/17	Contig	"Institute of Medicinal Microbiology, Immunology and Parasitology"	SAMN03249216	GCA_001679575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/575/GCA_001679575.1_ASM167957v1	-	137/93A
Staphylococcus aureus subsp. aureus	46170	PRJNA269094	269094	Terrabacteria group	Firmicutes	2.93884	32.8	-	JWMI01	29	3127	2886	7/5/16	9/22/17	Contig	"Institute of Medicinal Microbiology, Immunology and Parasitology"	SAMN03249215	GCA_001679585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/585/GCA_001679585.1_ASM167958v1	-	1450/94
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.84619	52.1	-	CIQH01	50	5041	4687	3/21/15	2/27/17	Scaffold	SC	SAMEA2056048	GCA_001082565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/565/GCA_001082565.1_10071_3_3	-	2181
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.78982	50.9	-	NLRV01	153	4900	4573	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279452	GCA_002232175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/175/GCA_002232175.1_ASM223217v1	-	MOD1-EC5119
Mycobacterium tuberculosis	1773	PRJNA222494	222494	Terrabacteria group	Actinobacteria	4.53944	64.1	chromosome:CP008965.1	-	1	3545	3269	7/29/14	7/29/14	Chromosome	Los Alamos National Lab	SAMN02911562	GCA_000735915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/915/GCA_000735915.1_ASM73591v1	-	0B222DS
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.0281	39.7	-	CHSL01	23	2230	1995	4/21/15	3/5/17	Scaffold	SC	SAMEA1025266	GCA_001341095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/095/GCA_001341095.1_6736_5_24	-	SMRU1248
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10205	39.6	-	CFGB01	233	2313	2081	3/15/15	3/5/17	Scaffold	SC	SAMEA1025274	GCA_001341115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/115/GCA_001341115.1_6805_5_9	-	SMRU1689
Mycobacterium tuberculosis	1773	PRJNA222494	222494	Terrabacteria group	Actinobacteria	4.53944	64.1	chromosome:CP008966.1	-	1	3713	3408	7/29/14	7/29/14	Chromosome	Los Alamos National Lab	SAMN02911563	GCA_000735935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/935/GCA_000735935.1_ASM73593v1	-	0B218DS
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.74232	50.8	-	NLSM01	153	4882	4649	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279438	GCA_002232195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/195/GCA_002232195.1_ASM223219v1	-	MOD1-EC5101
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7243	52.1	-	CIRJ01	52	4907	4543	3/21/15	2/27/17	Scaffold	SC	SAMEA2057238	GCA_001082585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/585/GCA_001082585.1_10071_3_92	-	A136
Staphylococcus aureus subsp. aureus	46170	PRJNA269094	269094	Terrabacteria group	Firmicutes	2.84241	32.8	-	JWMG01	41	3049	2825	7/5/16	9/22/17	Contig	"Institute of Medicinal Microbiology, Immunology and Parasitology"	SAMN03249217	GCA_001679625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/625/GCA_001679625.1_ASM167962v1	-	137/93G
Staphylococcus aureus	1280	PRJNA323745	323745	Terrabacteria group	Firmicutes	2.77789	32.8	-	MAQM01	65	2888	2720	7/7/16	3/6/17	Contig	CSIRO	SAMN05188396	GCA_001680915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/915/GCA_001680915.1_ASM168091v1	-	Sa13-005
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69453	52.1	-	CIQI01	44	4856	4500	3/21/15	2/27/17	Scaffold	SC	SAMEA2057106	GCA_001082605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/605/GCA_001082605.1_10071_3_29	-	1647624
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.03915	50.5	-	NLSC01	139	5114	4792	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04444412	GCA_002232215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/215/GCA_002232215.1_ASM223221v1	-	MOD1-EC5112
Mycobacterium tuberculosis	1773	PRJNA222494	222494	Terrabacteria group	Actinobacteria	4.53944	64	chromosome:CP008967.1	-	1	3456	2946	7/29/14	7/29/14	Chromosome	Los Alamos National Lab	SAMN02911575	GCA_000735955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/955/GCA_000735955.1_ASM73595v1	-	0B169XDR
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.06619	39.4	-	CHTN01	63	2286	2051	4/21/15	3/5/17	Scaffold	SC	SAMEA1025282	GCA_001341155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/155/GCA_001341155.1_6753_2_10	-	SMRU1499
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.11676	39.5	-	CICO01	53	2322	2103	4/21/15	3/5/17	Scaffold	SC	SAMEA1025286	GCA_001341175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/175/GCA_001341175.1_6841_7_9	-	SMRU1329
Mycobacterium tuberculosis	1773	PRJNA222494	222494	Terrabacteria group	Actinobacteria	4.53944	64.4	chromosome:CP008968.1	-	1	3937	3784	7/29/14	7/29/14	Chromosome	Los Alamos National Lab	SAMN02911576	GCA_000735975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/975/GCA_000735975.1_ASM73597v1	-	0B123ND
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.77682	50.5	-	NLSO01	55	4852	4615	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279436	GCA_002232235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/235/GCA_002232235.1_ASM223223v1	-	MOD1-EC5099
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72332	52	-	CIQC01	53	4885	4524	3/21/15	2/27/17	Scaffold	SC	SAMEA2056953	GCA_001082625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/625/GCA_001082625.1_10071_3_2	-	1877
Staphylococcus aureus	1280	PRJNA323745	323745	Terrabacteria group	Firmicutes	2.6993	32.7	-	MAQI01	84	2816	2638	7/7/16	3/6/17	Contig	CSIRO	SAMN05188392	GCA_001680925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/925/GCA_001680925.1_ASM168092v1	-	Sa13-001
Staphylococcus aureus	1280	PRJNA323745	323745	Terrabacteria group	Firmicutes	2.6774	32.7	-	MAQH01	23	2751	2612	7/7/16	3/6/17	Contig	CSIRO	SAMN05188391	GCA_001680935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/935/GCA_001680935.1_ASM168093v1	-	Sa12-002
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.78398	52	-	CIPM01	42	4949	4575	3/21/15	2/27/17	Scaffold	SC	SAMEA1966552	GCA_001082645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/645/GCA_001082645.1_10060_6_75	-	129-0327-M
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.75993	50.7	-	NLSP01	119	4899	4670	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279435	GCA_002232255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/255/GCA_002232255.1_ASM223225v1	-	MOD1-EC5098
Mycobacterium tuberculosis	1773	PRJNA222494	222494	Terrabacteria group	Actinobacteria	4.53944	63.4	chromosome:CP008969.1	-	1	3040	2473	7/29/14	7/29/14	Chromosome	Los Alamos National Lab	SAMN02911578	GCA_000735995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/735/995/GCA_000735995.1_ASM73599v1	-	0B076XDR
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.19245	39.5	-	CGXK01	76	2448	2199	4/21/15	3/5/17	Scaffold	SC	SAMEA1025297	GCA_001341235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/235/GCA_001341235.1_6755_6_14	-	SMRU1191
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.0979	39.7	-	CGXC01	89	2328	2118	4/21/15	3/5/17	Scaffold	SC	SAMEA1025300	GCA_001341255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/255/GCA_001341255.1_6736_5_6	-	SMRU1230
Mycobacterium tuberculosis	1773	PRJNA222494	222494	Terrabacteria group	Actinobacteria	4.53944	64.4	chromosome:CP008970.1	-	1	3926	3775	7/29/14	7/29/14	Chromosome	Los Alamos National Lab	SAMN02911579	GCA_000736015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/015/GCA_000736015.1_ASM73601v1	-	0B070XDR
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.08591	50.7	-	NLTO01	210	5385	4975	7/25/17	8/1/17	Contig	FDA/CFSAN	SAMN04279406	GCA_002232275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/275/GCA_002232275.1_ASM223227v1	-	MOD1-EC5069
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93333	51.8	-	CITJ01	51	5133	4753	3/21/15	2/27/17	Scaffold	SC	SAMEA2066341	GCA_001082665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/665/GCA_001082665.1_10071_8_67	-	2010K-0533
Staphylococcus aureus	1280	PRJNA323745	323745	Terrabacteria group	Firmicutes	2.76375	32.8	-	MAQN01	66	2885	2714	7/7/16	3/6/17	Contig	CSIRO	SAMN05188397	GCA_001680945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/945/GCA_001680945.1_ASM168094v1	-	Sa13-006
Staphylococcus aureus	1280	PRJNA323745	323745	Terrabacteria group	Firmicutes	2.71067	32.7	-	MAQP01	35	2813	2694	7/7/16	3/6/17	Contig	CSIRO	SAMN05188399	GCA_001680995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/680/995/GCA_001680995.1_ASM168099v1	-	Sa14-002
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69756	52.1	-	CIOQ01	42	4858	4506	3/21/15	2/27/17	Scaffold	SC	SAMEA2055252	GCA_001082685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/685/GCA_001082685.1_10060_6_26	-	UI13599
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.03629	50.7	-	NLRX01	213	5284	4877	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279450	GCA_002232295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/295/GCA_002232295.1_ASM223229v1	-	MOD1-EC5117
Mycobacterium tuberculosis	1773	PRJNA222494	222494	Terrabacteria group	Actinobacteria	4.53943	62.8	chromosome:CP008971.1	-	1	2640	2030	7/29/14	7/29/14	Chromosome	Los Alamos National Lab	SAMN02911581	GCA_000736035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/035/GCA_000736035.1_ASM73603v1	-	0B049XDR
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.26331	39.6	-	CGXA01	79	2541	2276	4/21/15	3/5/17	Scaffold	SC	SAMEA1025301	GCA_001341275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/275/GCA_001341275.1_6736_8_11	-	SMRU1307
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.15309	39.7	-	CHSE01	46	2329	2080	4/21/15	3/5/17	Scaffold	SC	SAMEA1025315	GCA_001341315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/315/GCA_001341315.1_6736_8_18	-	SMRU1314
Mycobacterium tuberculosis	1773	PRJNA222494	222494	Terrabacteria group	Actinobacteria	4.53943	64.2	chromosome:CP008972.1	-	1	3678	3251	7/29/14	7/29/14	Chromosome	Los Alamos National Lab	SAMN02911582	GCA_000736055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/055/GCA_000736055.1_ASM73605v1	-	0B026XDR
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.07404	50.5	-	NLSX01	190	5282	4959	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279427	GCA_002232305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/305/GCA_002232305.1_ASM223230v1	-	MOD1-EC5090
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.6996	52.1	-	CIPE01	47	4846	4486	3/21/15	2/27/17	Scaffold	SC	SAMEA2055261	GCA_001082705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/705/GCA_001082705.1_10060_6_53	-	UI5026
Staphylococcus aureus	1280	PRJNA323745	323745	Terrabacteria group	Firmicutes	2.73804	32.7	-	MAQQ01	35	2814	2712	7/7/16	3/6/17	Contig	CSIRO	SAMN05188400	GCA_001681005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/005/GCA_001681005.1_ASM168100v1	-	Sa14-003
Staphylococcus aureus	1280	PRJNA323745	323745	Terrabacteria group	Firmicutes	2.78601	32.8	-	MAQT01	45	2895	2718	7/7/16	3/6/17	Contig	CSIRO	SAMN05188403	GCA_001681015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/015/GCA_001681015.1_ASM168101v1	-	Sa14-006
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82996	51.9	-	CINE01	60	5003	4641	3/21/15	2/27/17	Scaffold	SC	SAMEA2056815	GCA_001082805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/805/GCA_001082805.1_10060_5_55	-	A267
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.14227	50.5	-	NLSK01	169	5219	4858	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279440	GCA_002232335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/335/GCA_002232335.1_ASM223233v1	-	MOD1-EC5103
Mycobacterium tuberculosis	1773	PRJNA222494	222494	Terrabacteria group	Actinobacteria	4.53944	64.1	chromosome:CP008973.1	-	1	3699	3363	7/29/14	7/29/14	Chromosome	Los Alamos National Lab	SAMN02911564	GCA_000736075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/075/GCA_000736075.1_ASM73607v1	-	0A117DS
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.14279	39.4	-	CFEE01	54	2327	2094	3/15/15	3/5/17	Scaffold	SC	SAMEA1025316	GCA_001341335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/335/GCA_001341335.1_6755_6_13	-	SMRU1190
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12202	39.4	-	CHSY01	67	2375	2132	4/21/15	3/5/17	Scaffold	SC	SAMEA1025331	GCA_001341375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/375/GCA_001341375.1_6736_5_22	-	SMRU1246
Mycobacterium tuberculosis	1773	PRJNA222494	222494	Terrabacteria group	Actinobacteria	4.53944	64.2	chromosome:CP008974.1	-	1	3640	3282	7/29/14	7/29/14	Chromosome	Los Alamos National Lab	SAMN02911565	GCA_000736095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/095/GCA_000736095.1_ASM73609v1	-	0A115DS
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.07149	50.5	-	NLSI01	163	5318	5004	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04444411	GCA_002232355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/355/GCA_002232355.1_ASM223235v1	-	MOD1-EC5105
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69915	52.1	-	CIPJ01	43	4856	4506	3/21/15	2/27/17	Scaffold	SC	SAMEA2056712	GCA_001082825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/825/GCA_001082825.1_10060_6_66	-	XK1682
Staphylococcus aureus	1280	PRJNA323745	323745	Terrabacteria group	Firmicutes	2.7866	32.8	-	MAQU01	45	2899	2714	7/7/16	3/6/17	Contig	CSIRO	SAMN05188404	GCA_001681025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/025/GCA_001681025.1_ASM168102v1	-	Sa14-007
Staphylococcus aureus	1280	PRJNA323745	323745	Terrabacteria group	Firmicutes	2.69622	32.7	-	MAQG01	28	2824	2584	7/7/16	3/6/17	Contig	CSIRO	SAMN05188390	GCA_001681075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/075/GCA_001681075.1_ASM168107v1	-	Sa12-001
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71934	52	-	CIRL01	41	4877	4525	3/21/15	2/27/17	Scaffold	SC	SAMEA2067626	GCA_001082865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/865/GCA_001082865.1_10071_8_11	-	Gen-0011
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.9847	50.6	-	NLSG01	770	6306	5713	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279443	GCA_002232375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/375/GCA_002232375.1_ASM223237v1	-	MOD1-EC5107
Mycobacterium tuberculosis	1773	PRJNA222494	222494	Terrabacteria group	Actinobacteria	4.53944	64.5	chromosome:CP008975.1	-	1	3916	3727	7/29/14	7/29/14	Chromosome	Los Alamos National Lab	SAMN02911566	GCA_000736115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/115/GCA_000736115.1_ASM73611v1	-	0A094DS
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09336	39.6	-	CICP01	46	2316	2074	4/21/15	3/11/17	Scaffold	SC	SAMEA1025337	GCA_001341415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/415/GCA_001341415.1_6841_7_7	-	SMRU1327
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.03222	39.7	-	CGWZ01	71	2232	2031	4/21/15	3/11/17	Scaffold	SC	SAMEA1025341	GCA_001341455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/455/GCA_001341455.1_6736_7_22	-	SMRU1294
Mycobacterium tuberculosis	1773	PRJNA222494	222494	Terrabacteria group	Actinobacteria	4.53944	64.5	chromosome:CP008976.1	-	1	3915	3725	7/29/14	7/29/14	Chromosome	Los Alamos National Lab	SAMN02911567	GCA_000736135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/135/GCA_000736135.1_ASM73613v1	-	0A093DS
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.95971	50.6	-	NLTL01	137	5159	4855	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279410	GCA_002232385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/385/GCA_002232385.1_ASM223238v1	-	MOD1-EC5073
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.78937	52.1	-	CIPN01	46	4963	4586	3/21/15	2/27/17	Scaffold	SC	SAMEA2055442	GCA_001082885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/885/GCA_001082885.1_10060_6_77	-	129-0268-M
Staphylococcus aureus	1280	PRJNA323745	323745	Terrabacteria group	Firmicutes	2.69324	32.7	-	MAQJ01	161	2820	2623	7/7/16	3/6/17	Contig	CSIRO	SAMN05188393	GCA_001681085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/085/GCA_001681085.1_ASM168108v1	-	Sa13-002
Staphylococcus aureus	1280	PRJNA323745	323745	Terrabacteria group	Firmicutes	2.77885	32.8	-	MAQL01	63	2894	2723	7/7/16	3/6/17	Contig	CSIRO	SAMN05188395	GCA_001681105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/105/GCA_001681105.1_ASM168110v1	-	Sa13-004
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.85027	52	-	CIRK01	49	5060	4682	3/21/15	2/27/17	Scaffold	SC	SAMEA2056955	GCA_001082905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/082/905/GCA_001082905.1_10071_3_8	-	TY053
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.80701	50.7	-	NLSN01	129	4931	4681	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279437	GCA_002232395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/395/GCA_002232395.1_ASM223239v1	-	MOD1-EC5100
Mycobacterium tuberculosis	1773	PRJNA222494	222494	Terrabacteria group	Actinobacteria	4.53944	64.5	chromosome:CP008977.1	-	1	3917	3737	7/29/14	7/29/14	Chromosome	Los Alamos National Lab	SAMN02911568	GCA_000736155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/155/GCA_000736155.1_ASM73615v1	-	0A092DS
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10805	39.5	-	CHSS01	57	2314	2081	4/21/15	3/11/17	Scaffold	SC	SAMEA1025352	GCA_001341495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/495/GCA_001341495.1_6736_4_7	-	SMRU1207
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.16736	39.5	-	CICB01	49	2380	2165	4/21/15	3/11/17	Scaffold	SC	SAMEA1025355	GCA_001341515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/515/GCA_001341515.1_6753_2_5	-	SMRU1493
Mycobacterium tuberculosis	1773	PRJNA222494	222494	Terrabacteria group	Actinobacteria	4.53944	64.6	chromosome:CP008978.1	-	1	3954	3750	7/29/14	7/29/14	Chromosome	Los Alamos National Lab	SAMN02911571	GCA_000736175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/175/GCA_000736175.1_ASM73617v1	-	0A087DS
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.6869	50.6	-	NLSQ01	84	4812	4524	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279434	GCA_002232435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/435/GCA_002232435.1_ASM223243v1	-	MOD1-EC5097
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.91062	51.9	-	CJJV01	52	5127	4757	3/21/15	2/27/17	Scaffold	SC	SAMEA1930252	GCA_001083005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/005/GCA_001083005.1_10592_2_65	-	Sep-24
Staphylococcus aureus	1280	PRJNA323745	323745	Terrabacteria group	Firmicutes	2.78513	32.8	-	MAQK01	57	2903	2735	7/7/16	3/6/17	Contig	CSIRO	SAMN05188394	GCA_001681115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/115/GCA_001681115.1_ASM168111v1	-	Sa13-003
Staphylococcus aureus	1280	PRJNA323745	323745	Terrabacteria group	Firmicutes	2.76501	32.8	-	MAQO01	32	2873	2737	7/7/16	3/6/17	Contig	CSIRO	SAMN05188398	GCA_001681155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/155/GCA_001681155.1_ASM168115v1	-	Sa14-001
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72238	52	-	CIZU01	52	4887	4517	3/21/15	2/27/17	Scaffold	SC	SAMEA2153306	GCA_001083065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/065/GCA_001083065.1_10492_1_38	-	MDUST237
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.11829	50.3	-	NLSS01	180	5231	4890	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279432	GCA_002232455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/455/GCA_002232455.1_ASM223245v1	-	MOD1-EC5095
Mycobacterium tuberculosis	1773	PRJNA222494	222494	Terrabacteria group	Actinobacteria	4.53944	63.6	chromosome:CP008979.1	-	1	3205	2663	7/29/14	7/29/14	Chromosome	Los Alamos National Lab	SAMN02911569	GCA_000736195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/195/GCA_000736195.1_ASM73619v1	-	0A036DS
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.16872	39.5	-	CGYD01	76	2391	2184	4/21/15	3/11/17	Scaffold	SC	SAMEA1025356	GCA_001341535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/535/GCA_001341535.1_6805_6_13	-	SMRU1717
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.0681	39.6	-	CHSN01	50	2316	2098	4/21/15	3/11/17	Scaffold	SC	SAMEA1025358	GCA_001341555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/555/GCA_001341555.1_6736_8_20	-	SMRU1316
Mycobacterium tuberculosis	1773	PRJNA222494	222494	Terrabacteria group	Actinobacteria	4.53944	64.5	chromosome:CP008980.1	-	1	3928	3682	7/29/14	7/29/14	Chromosome	Los Alamos National Lab	SAMN02911570	GCA_000736215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/215/GCA_000736215.1_ASM73621v1	-	0A033DS
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.86916	50.5	-	NLTM01	186	5057	4752	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279408	GCA_002232475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/475/GCA_002232475.1_ASM223247v1	-	MOD1-EC5071
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.86254	52.1	-	CJNV01	401	5084	4632	3/21/15	2/27/17	Scaffold	SC	SAMEA2161397	GCA_001083165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/165/GCA_001083165.1_10608_2_68	-	2012-022646
Staphylococcus aureus	1280	PRJNA323745	323745	Terrabacteria group	Firmicutes	2.69978	32.7	-	MAQR01	171	2851	2577	7/7/16	3/6/17	Contig	CSIRO	SAMN05188401	GCA_001681175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/175/GCA_001681175.1_ASM168117v1	-	Sa14-004
Staphylococcus aureus	1280	PRJNA323745	323745	Terrabacteria group	Firmicutes	2.7661	32.8	-	MAQS01	49	2892	2713	7/7/16	3/6/17	Contig	CSIRO	SAMN05188402	GCA_001681185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/681/185/GCA_001681185.1_ASM168118v1	-	Sa14-005
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93276	51.8	-	CJNC01	54	5138	4741	3/21/15	2/27/17	Scaffold	SC	SAMEA2155387	GCA_001083185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/185/GCA_001083185.1_10608_2_17	-	2006-024861
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.10425	50.8	-	NLSY01	152	5292	4935	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279426	GCA_002232495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/495/GCA_002232495.1_ASM223249v1	-	MOD1-EC5089
Mycobacterium tuberculosis	1773	PRJNA222494	222494	Terrabacteria group	Actinobacteria	4.53944	64.6	chromosome:CP008981.1	-	1	3935	3759	7/29/14	7/29/14	Chromosome	Los Alamos National Lab	SAMN02911572	GCA_000736235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/235/GCA_000736235.1_ASM73623v1	-	0A029DS
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10505	39.6	-	CFEJ01	64	2342	2114	3/15/15	3/11/17	Scaffold	SC	SAMEA1025379	GCA_001341595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/595/GCA_001341595.1_6830_3_1	-	SMRU1633
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.1531	39.7	-	CICJ01	60	2384	2161	4/21/15	3/11/17	Scaffold	SC	SAMEA1025385	GCA_001341635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/635/GCA_001341635.1_6807_1_24	-	SMRU1584
Mycobacterium tuberculosis	1773	PRJNA222494	222494	Terrabacteria group	Actinobacteria	4.53944	64.6	chromosome:CP008982.1	-	1	3935	3759	7/29/14	7/29/14	Chromosome	Los Alamos National Lab	SAMN02911573	GCA_000736255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/255/GCA_000736255.1_ASM73625v1	-	0A012DS
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.26232	50.4	-	NLSR01	156	5476	5183	7/25/17	8/1/17	Contig	FDA/CFSAN	SAMN04279433	GCA_002232505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/505/GCA_002232505.1_ASM223250v1	-	MOD1-EC5096
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72262	52	-	CEXT01	54	4886	4519	3/10/15	2/27/17	Scaffold	SC	SAMEA2153121	GCA_001083605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/605/GCA_001083605.1_10562_2_65	-	MDUST375
Staphylococcus aureus subsp. aureus	46170	PRJNA320040	320040	Terrabacteria group	Firmicutes	2.68463	32.8	-	LXGP01	24	2784	2612	7/28/16	3/2/17	Contig	Genomic Research Laboratory (GRL)	SAMN04914827	GCA_001696355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/355/GCA_001696355.1_ASM169635v1	-	SA12-148
Staphylococcus aureus subsp. aureus	46170	PRJNA320039	320039	Terrabacteria group	Firmicutes	2.70053	32.8	-	LXGR01	26	2798	2620	7/28/16	3/6/17	Contig	Genomic Research Laboratory (GRL)	SAMN04914826	GCA_001696365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/365/GCA_001696365.1_ASM169636v1	-	SA10-234
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.79497	52.1	-	CJFD01	63	4990	4618	3/21/15	2/27/17	Scaffold	SC	SAMEA2154270	GCA_001083745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/745/GCA_001083745.1_10561_2_2	-	np41
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.95704	50.6	-	NLSW01	295	5165	4713	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279428	GCA_002232535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/535/GCA_002232535.1_ASM223253v1	-	MOD1-EC5091
Mycobacterium tuberculosis	1773	PRJNA222494	222494	Terrabacteria group	Actinobacteria	4.53943	63.6	chromosome:CP008983.1	-	1	3048	2477	7/29/14	7/29/14	Chromosome	Los Alamos National Lab	SAMN02911574	GCA_000736275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/275/GCA_000736275.1_ASM73627v1	-	0A005DS
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09795	39.7	-	CGXT01	67	2318	2092	4/21/15	3/11/17	Scaffold	SC	SAMEA1025393	GCA_001341695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/695/GCA_001341695.1_6805_4_15	-	SMRU1671
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.17546	39.7	-	CGWP01	63	2377	2156	4/21/15	3/11/17	Scaffold	SC	SAMEA1025397	GCA_001341715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/715/GCA_001341715.1_6710_7_23	-	SMRU1391
Mycobacterium tuberculosis C	348776	PRJNA16172	16172	Terrabacteria group	Actinobacteria	4.37912	64.6	-	AAKR01	4	3894	3508	11/9/05	2/7/14	Scaffold	Broad Institute	SAMN02595209	GCA_000152505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/152/505/GCA_000152505.1_ASM15250v1	-	C
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.2386	50.7	-	NLUM01	148	5531	5175	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279353	GCA_002232555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/555/GCA_002232555.1_ASM223255v1	-	MOD1-EC5025
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71002	52.1	-	CJYW01	48	4862	4507	3/21/15	2/27/17	Scaffold	SC	SAMEA2057241	GCA_001084005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/005/GCA_001084005.1_9953_5_8	-	A274
Staphylococcus aureus subsp. aureus	46170	PRJNA320041	320041	Terrabacteria group	Firmicutes	2.677	32.9	-	LXGS01	19	2771	2594	7/28/16	3/6/17	Contig	Genomic Research Laboratory (GRL)	SAMN04914828	GCA_001696415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/415/GCA_001696415.1_ASM169641v1	-	SA14-296
Staphylococcus aureus subsp. aureus	46170	PRJNA320038	320038	Terrabacteria group	Firmicutes	2.74537	32.8	-	LXGQ01	29	2852	2682	7/28/16	3/6/17	Contig	Genomic Research Laboratory (GRL)	SAMN04914825	GCA_001696445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/696/445/GCA_001696445.1_ASM169644v1	-	SA15-166
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72127	52	-	CEWW01	54	4881	4509	3/11/15	2/27/17	Scaffold	SC	SAMEA2142560	GCA_001084165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/165/GCA_001084165.1_10492_1_36	-	MDUST231
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.98741	50.4	-	NLUA01	204	5193	4868	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279378	GCA_002232565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/565/GCA_002232565.1_ASM223256v1	-	MOD1-EC5050
Mycobacterium tuberculosis 94_M4241A	515615	PRJNA29165	29165	Terrabacteria group	Actinobacteria	4.49332	64.3	-	ABLL01	10	3977	3931	5/30/08	2/7/14	Scaffold	Broad Institute	SAMN02595224	GCA_000155145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/145/GCA_000155145.1_ASM15514v1	-	94_M4241A
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12222	39.7	-	CFDE01	62	2351	2127	3/15/15	3/11/17	Scaffold	SC	SAMEA1025429	GCA_001341855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/855/GCA_001341855.1_6807_2_16	-	SMRU1600
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.06445	39.6	-	CFEH01	69	2270	2045	3/15/15	3/11/17	Scaffold	SC	SAMEA1025435	GCA_001341875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/875/GCA_001341875.1_6807_1_12	-	SMRU1572
Mycobacterium tuberculosis 02_1987	515616	PRJNA29167	29167	Terrabacteria group	Actinobacteria	4.56907	63.5	-	ABLM01	22	4126	4081	5/30/08	2/7/14	Scaffold	Broad Institute	SAMN02595225	GCA_000155165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/165/GCA_000155165.1_ASM15516v1	-	02_1987
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.20339	50.4	-	NLST01	183	5347	5032	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279431	GCA_002232595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/595/GCA_002232595.1_ASM223259v1	-	MOD1-EC5094
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.92511	51.8	-	CJLQ01	57	5127	4733	3/21/15	2/27/17	Scaffold	SC	SAMEA2152418	GCA_001084205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/205/GCA_001084205.1_10607_1_49	-	2009-020666
Staphylococcus aureus	1280	PRJNA323932	323932	Terrabacteria group	Firmicutes	2.83188	32.7	-	MCFM01	61	2995	2785	8/24/16	3/6/17	Contig	Universidad Autonoma de Sinaloa	SAMN05191965	GCA_001712495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/712/495/GCA_001712495.1_ASM171249v1	-	5R-157-2
Staphylococcus aureus	1280	PRJNA336115	336115	Terrabacteria group	Firmicutes	2.82408	32.9	-	MDWC01	94	2902	2754	9/5/16	3/6/17	Contig	LAU	SAMN05504286	GCA_001720535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/535/GCA_001720535.1_ASM172053v1	-	SAB_M_16
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7214	52	-	CJGB01	55	4884	4515	3/21/15	2/27/17	Scaffold	SC	SAMEA2143651	GCA_001084245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/245/GCA_001084245.1_10561_2_58	-	np65
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.93403	50.6	-	NLSU01	76	5079	4797	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279430	GCA_002232615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/615/GCA_002232615.1_ASM223261v1	-	MOD1-EC5093
Mycobacterium tuberculosis T92	515617	PRJNA29169	29169	Terrabacteria group	Actinobacteria	4.37749	63.4	-	ABLN01	31	4240	4198	5/30/08	2/7/14	Scaffold	Broad Institute	SAMN02595226	GCA_000155185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/185/GCA_000155185.1_ASM15518v1	-	T92
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	1.99795	39.8	-	CGXU01	29	2193	1956	4/21/15	3/11/17	Scaffold	SC	SAMEA1025438	GCA_001341895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/895/GCA_001341895.1_6805_2_16	-	SMRU1432
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08783	39.7	-	CHQM01	63	2296	2092	4/21/15	3/11/17	Scaffold	SC	SAMEA1025441	GCA_001341935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/935/GCA_001341935.1_6710_7_6	-	SMRU1374
Mycobacterium tuberculosis EAS054	520140	PRJNA29329	29329	Terrabacteria group	Actinobacteria	4.43417	64.7	-	ABOV01	6	4079	4034	5/30/08	2/7/14	Scaffold	Broad Institute	SAMN02595227	GCA_000155225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/225/GCA_000155225.1_ASM15522v1	-	EAS054
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.66828	50.8	-	NLTJ01	216	4970	4531	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279415	GCA_002232635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/635/GCA_002232635.1_ASM223263v1	-	MOD1-EC5078
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72124	52	-	CJFY01	55	4873	4513	3/21/15	2/27/17	Scaffold	SC	SAMEA2157074	GCA_001084325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/325/GCA_001084325.1_10561_2_59	-	np92
Staphylococcus aureus	1280	PRJNA335948	335948	Terrabacteria group	Firmicutes	2.83092	33	-	MDWD01	103	2904	2758	9/5/16	3/6/17	Contig	LAU	SAMN05467355	GCA_001720565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/565/GCA_001720565.1_ASM172056v1	-	SAM_W_16
Staphylococcus aureus	1280	PRJNA339741	339741	Terrabacteria group	Firmicutes	2.7827	32.7	-	MEGZ01	8	2935	2779	9/9/16	3/6/17	Contig	Public Health Agency of Canada	SAMN05605119	GCA_001722595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/722/595/GCA_001722595.1_ASM172259v1	-	NML151290
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71815	52	-	CJKK01	42	4895	4522	3/21/15	2/27/17	Scaffold	SC	SAMEA1930198	GCA_001084525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/525/GCA_001084525.1_10593_2_26	-	E00-9345
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.12886	50.6	-	NLSV01	223	5355	5036	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279429	GCA_002232655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/655/GCA_002232655.1_ASM223265v1	-	MOD1-EC5092
Mycobacterium tuberculosis T85	520141	PRJNA29327	29327	Terrabacteria group	Actinobacteria	4.42467	63.5	-	ABOW01	17	4088	4045	5/30/08	2/7/14	Scaffold	Broad Institute	SAMN02595228	GCA_000155245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/245/GCA_000155245.1_ASM15524v1	-	T85
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.22668	39.4	-	CFEG01	78	2450	2206	3/15/15	3/11/17	Scaffold	SC	SAMEA1025448	GCA_001341955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/955/GCA_001341955.1_6805_2_15	-	SMRU1431
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07368	39.8	-	CGXJ01	61	2326	2089	4/21/15	3/11/17	Scaffold	SC	SAMEA1025461	GCA_001341995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/341/995/GCA_001341995.1_6755_6_23	-	SMRU1200
Mycobacterium tuberculosis GM 1503	537209	PRJNA30015	30015	Terrabacteria group	Actinobacteria	4.35665	64	-	ABQG01	17	4053	4009	6/23/08	2/7/14	Scaffold	Broad Institute	SAMN02595229	GCA_000155285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/285/GCA_000155285.1_ASM15528v1	-	GM 1503
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.36724	50.4	-	NLSZ01	194	5688	5257	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279425	GCA_002232675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/675/GCA_002232675.1_ASM223267v1	-	MOD1-EC5088
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72404	52	-	CIZF01	57	4877	4514	3/21/15	2/27/17	Scaffold	SC	SAMEA2159482	GCA_001084945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/945/GCA_001084945.1_10492_1_26	-	MDUST198
Staphylococcus aureus	1280	PRJNA319366	319366	Terrabacteria group	Firmicutes	2.83352	32.8	-	MIZI01	197	2906	2718	9/24/16	3/6/17	Contig	"Jet Propulsion Laboratory, California Institute of Technology"	SAMN04902347	GCA_001743105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/743/105/GCA_001743105.1_ASM174310v1	-	IF6SW-P2
Staphylococcus aureus	1280	PRJNA319366	319366	Terrabacteria group	Firmicutes	2.84118	32.8	-	MIZK01	227	2898	2712	9/24/16	3/6/17	Contig	"Jet Propulsion Laboratory, California Institute of Technology"	SAMN04902349	GCA_001743125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/743/125/GCA_001743125.1_ASM174312v1	-	IF6SW-P2-RA
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.85227	52	-	CJCT01	59	5050	4681	3/21/15	2/27/17	Scaffold	SC	SAMEA2161914	GCA_001084965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/965/GCA_001084965.1_10493_1_80	-	MDUST383
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.14974	50.4	-	NLTZ01	78	5196	4900	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279379	GCA_002232695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/695/GCA_002232695.1_ASM223269v1	-	MOD1-EC5051
Mycobacterium tuberculosis T17	537210	PRJNA30017	30017	Terrabacteria group	Actinobacteria	4.43053	63.4	-	ABQH01	22	4347	4303	6/23/08	2/7/14	Scaffold	Broad Institute	SAMN02595230	GCA_000155305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/305/GCA_000155305.1_ASM15530v1	-	T17
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.13114	39.4	-	CFBD01	60	2319	2092	3/15/15	3/11/17	Scaffold	SC	SAMEA1025464	GCA_001342015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/015/GCA_001342015.1_6736_7_1	-	SMRU1273
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10391	39.5	-	CHUD01	43	2326	2109	4/21/15	3/11/17	Scaffold	SC	SAMEA1025479	GCA_001342075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/075/GCA_001342075.1_6805_3_18	-	SMRU1458
Mycobacterium tuberculosis T46	611302	PRJNA34551	34551	Terrabacteria group	Actinobacteria	4.41253	64.5	-	ACHO01	8	4207	4162	3/31/09	2/7/14	Scaffold	Broad Institute	SAMN02595305	GCA_000159735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/159/735/GCA_000159735.1_ASM15973v1	-	T46
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.22526	50.5	-	NLTA01	386	5667	5146	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279424	GCA_002232715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/715/GCA_002232715.1_ASM223271v1	-	MOD1-EC5087
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72534	52.1	-	CJKF01	43	4891	4539	3/21/15	2/27/17	Scaffold	SC	SAMEA1930270	GCA_001084985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/985/GCA_001084985.1_10593_2_18	-	E02-5919
Staphylococcus aureus	1280	PRJNA319366	319366	Terrabacteria group	Firmicutes	2.85531	32.8	-	MIZL01	255	2919	2725	9/24/16	3/6/17	Contig	"Jet Propulsion Laboratory, California Institute of Technology"	SAMN04902350	GCA_001743135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/743/135/GCA_001743135.1_ASM174313v1	-	IF6SW-P3A-RA
Staphylococcus aureus	1280	PRJNA319366	319366	Terrabacteria group	Firmicutes	2.9497	32.8	-	MIZM01	448	2991	2782	9/24/16	3/6/17	Contig	"Jet Propulsion Laboratory, California Institute of Technology"	SAMN04902351	GCA_001743195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/743/195/GCA_001743195.1_ASM174319v1	-	IF7SW-P3
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.85147	52	-	CJHE01	59	5042	4664	3/21/15	2/27/17	Scaffold	SC	SAMEA2151171	GCA_001085025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/025/GCA_001085025.1_10562_2_40	-	MDUST271
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.86076	50.7	-	NLTP01	132	5051	4774	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279403	GCA_002232735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/735/GCA_002232735.1_ASM223273v1	-	MOD1-EC5066
Mycobacterium tuberculosis SUMu012	675523	PRJNA43625	43625	Terrabacteria group	Actinobacteria	4.39958	64.2	-	ADIB01	93	4232	3933	3/3/10	2/7/14	Scaffold	Broad Institute	SAMN02595391	GCA_000177975.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/177/975/GCA_000177975.2_ASM17797v2	-	SUMu012
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09384	39.5	-	CFFR01	59	2343	2125	3/15/15	3/11/17	Scaffold	SC	SAMEA1025498	GCA_001342095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/095/GCA_001342095.1_6807_3_17	-	SMRU1625
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	1.99681	39.8	-	CHHS01	58	2157	1891	4/21/15	3/11/17	Scaffold	SC	SAMEA1025506	GCA_001342135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/135/GCA_001342135.1_6841_7_2	-	SMRU1322
Mycobacterium tuberculosis TKK-01-0051	1324261	PRJNA198146	198146	Terrabacteria group	Actinobacteria	6.04423	67.7	-	JLXW01	2	5690	5617	4/29/14	4/30/14	Scaffold	Broad Institute	SAMN02053784	GCA_000661085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/661/085/GCA_000661085.1_Myco_sp_TKK-01-0051_V1	-	TKK-01-0051
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.92629	50.7	-	NLTN01	121	5083	4775	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279407	GCA_002232755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/755/GCA_002232755.1_ASM223275v1	-	MOD1-EC5070
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.98716	52.1	-	CQHJ01	61	5182	4898	3/23/15	2/27/17	Scaffold	SC	SAMEA1568485	GCA_001085145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/145/GCA_001085145.1_8490_2_76	-	CH33
Staphylococcus aureus	1280	PRJNA319366	319366	Terrabacteria group	Firmicutes	2.81099	32.8	-	MIZP01	141	2879	2709	9/24/16	3/6/17	Contig	"Jet Propulsion Laboratory, California Institute of Technology"	SAMN04902354	GCA_001743215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/743/215/GCA_001743215.1_ASM174321v1	-	IIF8SW-P1
Staphylococcus aureus	1280	PRJNA319366	319366	Terrabacteria group	Firmicutes	2.83183	32.8	-	MIZO01	191	2900	2711	9/24/16	3/6/17	Contig	"Jet Propulsion Laboratory, California Institute of Technology"	SAMN04902353	GCA_001743235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/743/235/GCA_001743235.1_ASM174323v1	-	IIF6SW-P3
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7251	52.1	-	CIYJ01	40	4898	4552	3/21/15	2/27/17	Scaffold	SC	SAMEA2072892	GCA_001085185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/185/GCA_001085185.1_10349_1_8	-	ERL02732
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.28377	50.6	-	NLUL01	263	5592	5227	7/25/17	8/1/17	Contig	FDA/CFSAN	SAMN04279355	GCA_002232775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/775/GCA_002232775.1_ASM223277v1	-	MOD1-EC5027
Mycobacterium tuberculosis H37Ra	419947	PRJNA18649	18649	Terrabacteria group	Actinobacteria	4.32644	65.3	-	AAYK01	272	-	-	3/19/07	1/8/14	Contig	Beijing Genomics Institute	SAMN02469331	GCA_000169515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/169/515/GCA_000169515.1_ASM16951v1	-	H37Ra
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.1368	39.5	-	CHRX01	55	2398	2154	4/21/15	3/11/17	Scaffold	SC	SAMEA1025529	GCA_001342255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/255/GCA_001342255.1_6736_4_5	-	SMRU1205
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.03974	39.7	-	CHPK01	40	2240	2036	4/21/15	3/11/17	Scaffold	SC	SAMEA1025532	GCA_001342295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/295/GCA_001342295.1_6710_6_17	-	SMRU1361
Mycobacterium tuberculosis 210	164513	PRJNA273	273	Terrabacteria group	Actinobacteria	4.39533	65.4	-	ADAB01	130	-	-	10/20/09	11/19/13	Contig	TIGR	SAMN00010968	GCA_000176315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/315/GCA_000176315.1_ASM17631v1	-	210
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.19622	50.5	-	NLTB01	231	5488	5169	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279423	GCA_002232785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/785/GCA_002232785.1_ASM223278v1	-	MOD1-EC5086
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72208	52	-	CJBB01	52	4899	4514	3/21/15	2/27/17	Scaffold	SC	SAMEA1969872	GCA_001085205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/205/GCA_001085205.1_10492_1_83	-	MDUST410
Staphylococcus aureus	1280	PRJNA319366	319366	Terrabacteria group	Firmicutes	2.82976	32.8	-	MIZR01	191	2906	2714	9/24/16	3/6/17	Contig	"Jet Propulsion Laboratory, California Institute of Technology"	SAMN04902356	GCA_001743265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/743/265/GCA_001743265.1_ASM174326v1	-	IIF6SW-P2-RA
Staphylococcus aureus	1280	PRJNA319366	319366	Terrabacteria group	Firmicutes	2.83895	32.8	-	MIZS01	213	2917	2719	9/24/16	3/6/17	Contig	"Jet Propulsion Laboratory, California Institute of Technology"	SAMN04902357	GCA_001743275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/743/275/GCA_001743275.1_ASM174327v1	-	IIF6SW-P3-RA
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93273	51.8	-	CJVU01	54	5132	4760	3/21/15	2/27/17	Scaffold	SC	SAMEA1966660	GCA_001085245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/245/GCA_001085245.1_9870_8_65	-	BC20111457
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.0545	50.5	-	NLTC01	133	5156	4857	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279422	GCA_002232795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/795/GCA_002232795.1_ASM223279v1	-	MOD1-EC5085
Mycobacterium tuberculosis NA-A0009	1200348	PRJNA168605	168605	Terrabacteria group	Actinobacteria	4.38994	65.4	-	ALYH01	310	-	-	9/11/12	3/24/14	Contig	University of Hyderabad	SAMN02471797	GCA_000296155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/155/GCA_000296155.1_MycTubNAA0009_1.0	24652981	NA-A0009
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.1061	39.6	-	CHUM01	52	2328	2117	4/21/15	3/11/17	Scaffold	SC	SAMEA1025538	GCA_001342335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/335/GCA_001342335.1_6805_2_4	-	SMRU1420
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12876	39.4	-	CFBX01	57	2306	2081	3/15/15	3/5/17	Scaffold	SC	SAMEA1025542	GCA_001342355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/355/GCA_001342355.1_6805_2_23	-	SMRU1439
Mycobacterium tuberculosis NA-A0008	1200347	PRJNA168604	168604	Terrabacteria group	Actinobacteria	4.38336	65.4	-	ALYG01	280	-	-	9/11/12	3/24/14	Contig	University of Hyderabad	SAMN02471802	GCA_000296175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/296/175/GCA_000296175.1_MycTubNAA0008_1.0	24652981	NA-A0008
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.97239	50.5	-	NLTD01	70	5160	4867	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279421	GCA_002232835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/835/GCA_002232835.1_ASM223283v1	-	MOD1-EC5084
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93361	51.8	-	CIUQ01	58	5135	4747	3/21/15	2/27/17	Scaffold	SC	SAMEA1969385	GCA_001085485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/485/GCA_001085485.1_10209_5_10	-	2007-007506
Staphylococcus aureus	1280	PRJNA319366	319366	Terrabacteria group	Firmicutes	2.82892	32.8	-	MIZQ01	189	2902	2714	9/24/16	3/6/17	Contig	"Jet Propulsion Laboratory, California Institute of Technology"	SAMN04902355	GCA_001743285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/743/285/GCA_001743285.1_ASM174328v1	-	IIF8SW-P2
Staphylococcus aureus	1280	PRJNA319366	319366	Terrabacteria group	Firmicutes	2.83992	32.8	-	MIZT01	199	2901	2719	9/24/16	3/6/17	Contig	"Jet Propulsion Laboratory, California Institute of Technology"	SAMN04902358	GCA_001743305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/743/305/GCA_001743305.1_ASM174330v1	-	IIF8SW-P1-RA
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72897	52	-	CJJX01	49	4891	4530	3/21/15	2/27/17	Scaffold	SC	SAMEA1930147	GCA_001085525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/525/GCA_001085525.1_10592_2_70	-	E98-6926
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.35603	50.6	-	NLUW01	259	5662	5244	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279330	GCA_002232855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/855/GCA_002232855.1_ASM223285v1	-	MOD1-EC5002
Mycobacterium tuberculosis EAI/OSDD271	1322343	PRJNA196573	196573	Terrabacteria group	Actinobacteria	4.16941	65.4	-	AQQC01	182	-	-	6/17/13	11/19/13	Contig	Open Source Drug Discovery	SAMN02045564	GCA_000411895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/411/895/GCA_000411895.1_ASM41189v1	23908284	EAI/OSDD271
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.11393	39.6	-	CHUR01	64	2337	2110	4/21/15	3/5/17	Scaffold	SC	SAMEA1025545	GCA_001342375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/375/GCA_001342375.1_6805_4_24	-	SMRU1680
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.1505	39.6	-	CGXB01	84	2393	2156	4/21/15	3/5/17	Scaffold	SC	SAMEA1025548	GCA_001342395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/395/GCA_001342395.1_6736_8_2	-	SMRU1298
Mycobacterium tuberculosis OSDD105	1370123	PRJNA213252	213252	Terrabacteria group	Actinobacteria	4.26702	65.4	-	AUXD02	181	-	-	9/12/13	12/4/13	Contig	OSDD Open Access Repository	SAMN02264028	GCA_000466125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/125/GCA_000466125.2_ASM46612v2	24265496	OSDD105
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.43552	50.4	-	NLTE01	312	5807	5363	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279420	GCA_002232865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/865/GCA_002232865.1_ASM223286v1	-	MOD1-EC5083
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73455	52.1	-	CJIN01	45	4894	4538	3/21/15	2/27/17	Scaffold	SC	SAMEA1929433	GCA_001085605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/605/GCA_001085605.1_10592_2_14	-	200
Staphylococcus aureus	1280	PRJNA319366	319366	Terrabacteria group	Firmicutes	2.87694	32.8	-	MIZN01	307	2950	2738	9/24/16	3/6/17	Contig	"Jet Propulsion Laboratory, California Institute of Technology"	SAMN04902352	GCA_001743495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/743/495/GCA_001743495.1_ASM174349v1	-	IIF6SW-P2
Staphylococcus aureus	1280	PRJNA326798	326798	Terrabacteria group	Firmicutes	2.76211	32.7	-	MANS01	72	2870	2682	10/11/16	3/6/17	Contig	Christian Medical College	SAMN05292871	GCA_001756645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/645/GCA_001756645.1_ASM175664v1	-	VB23686
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72093	52	-	CIWN01	41	4882	4525	3/21/15	2/27/17	Scaffold	SC	SAMEA2072501	GCA_001085625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/625/GCA_001085625.1_10349_1_25	-	ERL063424
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.31425	50.3	-	NLTK01	168	5543	5137	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279411	GCA_002232895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/895/GCA_002232895.1_ASM223289v1	-	MOD1-EC5074
Mycobacterium tuberculosis OSDD493	1379257	PRJNA213484	213484	Terrabacteria group	Actinobacteria	4.22775	65.4	-	AVQJ01	193	-	-	9/12/13	11/20/13	Contig	OSDD Open Access Repository	SAMN02296616	GCA_000466145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/466/145/GCA_000466145.1_MtbOSDD493V1.0	24201204	OSDD493
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.15165	39.5	-	CIHH01	63	2337	2122	4/21/15	3/5/17	Scaffold	SC	SAMEA1025553	GCA_001342415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/415/GCA_001342415.1_6755_6_10	-	SMRU1186
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	1.99028	39.8	-	CICG01	66	2162	1975	4/21/15	3/5/17	Scaffold	SC	SAMEA1025555	GCA_001342435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/435/GCA_001342435.1_6807_1_1	-	SMRU1561
Mycobacterium tuberculosis str. OSDD515	1370124	PRJNA213253	213253	Terrabacteria group	Actinobacteria	4.20672	65.4	-	AUXC01	127	-	-	10/17/13	12/4/13	Contig	OSDD Open Access Repository	SAMN02264029	GCA_000474595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/474/595/GCA_000474595.1_MtbOSDD515V1.0	24265488	OSDD515
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.48693	50.7	-	NLTF01	338	5871	5397	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279419	GCA_002232915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/915/GCA_002232915.1_ASM223291v1	-	MOD1-EC5082
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.93121	52.1	-	CQGH01	54	5107	4833	3/23/15	2/27/17	Scaffold	SC	SAMEA1568473	GCA_001085685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/685/GCA_001085685.1_8490_2_75	-	CH32
Staphylococcus aureus	1280	PRJNA326801	326801	Terrabacteria group	Firmicutes	2.7724	32.7	-	MANT01	124	2865	2673	10/11/16	3/6/17	Contig	Christian Medical College	SAMN05292880	GCA_001756665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/756/665/GCA_001756665.1_ASM175666v1	-	VB31683
Staphylococcus aureus	1280	PRJNA348458	348458	Terrabacteria group	Firmicutes	2.78507	32.7	-	MLQD01	97	2890	2694	10/26/16	3/6/17	Contig	Christian Medical College	SAMN05908488	GCA_001854955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/955/GCA_001854955.1_ASM185495v1	-	VB16578
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.77688	52.2	-	CJDY01	60	4963	4586	3/21/15	2/27/17	Scaffold	SC	SAMEA2149220	GCA_001085905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/085/905/GCA_001085905.1_10541_2_34	-	MDUST309
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.10508	50.6	-	NLTY01	258	5396	4982	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279380	GCA_002232935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/935/GCA_002232935.1_ASM223293v1	-	MOD1-EC5052
Mycobacterium tuberculosis CWCFVRF MDRTB 670	1458472	PRJNA237272	237272	Terrabacteria group	Actinobacteria	4.34211	65.3	-	JDVY01	261	4271	4028	4/25/14	5/30/14	Contig	"VISION RESEARCH FOUNDATION, SANKARA NETHRALAYA"	SAMN02630624	GCA_000648395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/648/395/GCA_000648395.1_VRF_CWCF_MDR_670	24855307	CWCFVRF MDRTB 670
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.05563	39.6	-	CFAY01	44	2246	1998	3/15/15	3/15/17	Scaffold	SC	SAMEA1025558	GCA_001342455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/455/GCA_001342455.1_6736_7_15	-	SMRU1287
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.0871	39.5	-	CHTB01	78	2314	2082	4/21/15	3/5/17	Scaffold	SC	SAMEA1025566	GCA_001342495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/495/GCA_001342495.1_6753_2_23	-	SMRU1512
Mycobacterium tuberculosis	1773	PRJNA245379	245379	Terrabacteria group	Actinobacteria	4.33204	65.3	-	JMIM01	115	4055	3772	6/18/14	7/31/14	Contig	"VISION RESEARCH FOUNDATION, SANKARA NETHRALAYA"	SAMN02737054	GCA_000709975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/709/975/GCA_000709975.1_VRFCWCF_PRTB19	25035331	VRFCWCF PRTB19
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.66314	50.8	-	NLTG01	219	4991	4527	7/25/17	8/1/17	Contig	FDA/CFSAN	SAMN04279418	GCA_002232955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/955/GCA_002232955.1_ASM223295v1	-	MOD1-EC5081
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72166	52	-	CJFT01	58	4887	4505	3/21/15	2/27/17	Scaffold	SC	SAMEA2163175	GCA_001086265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/265/GCA_001086265.1_10561_2_54	-	np90
Staphylococcus aureus	1280	PRJNA348421	348421	Terrabacteria group	Firmicutes	2.77127	32.8	-	MLQI01	104	2870	2694	10/26/16	3/6/17	Contig	Christian Medical College	SAMN05908354	GCA_001854965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/965/GCA_001854965.1_ASM185496v1	-	VB9882
Staphylococcus aureus	1280	PRJNA348456	348456	Terrabacteria group	Firmicutes	2.76723	32.7	-	MLQC01	64	2876	2711	10/26/16	3/6/17	Contig	Christian Medical College	SAMN05908486	GCA_001854975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/975/GCA_001854975.1_ASM185497v1	-	VB35316
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.80605	52	-	CIYP01	60	5008	4543	3/21/15	2/27/17	Scaffold	SC	SAMEA2072800	GCA_001086325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/325/GCA_001086325.1_10349_1_91	-	SGB108
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.13191	50.5	-	NLTH01	103	5289	4972	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279417	GCA_002232975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/975/GCA_002232975.1_ASM223297v1	-	MOD1-EC5080
Mycobacterium tuberculosis	1773	PRJNA245387	245387	Terrabacteria group	Actinobacteria	4.32746	65.3	-	JMJH01	119	4053	3825	6/18/14	9/25/14	Contig	"VISION RESEARCH FOUNDATION, SANKARA NETHRALAYA"	SAMN02741280	GCA_000710055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/055/GCA_000710055.1_VRFCWCF_MRTB180	25212629	VRFCWCF MRTB180
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.19332	39.5	-	CHRZ01	50	2445	2199	4/21/15	3/5/17	Scaffold	SC	SAMEA1025569	GCA_001342515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/515/GCA_001342515.1_6736_6_18	-	SMRU1266
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09342	39.8	-	CFBE01	44	2276	2018	3/15/15	3/5/17	Scaffold	SC	SAMEA1025573	GCA_001342555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/555/GCA_001342555.1_6736_5_4	-	SMRU1228
Mycobacterium tuberculosis	1773	PRJNA252034	252034	Terrabacteria group	Actinobacteria	4.29333	65.4	-	JNVJ01	198	4003	3775	6/27/14	6/27/14	Contig	"VISION RESEARCH FOUNDATION, SANKARA NETHRALAYA"	SAMN02848646	GCA_000715255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/715/255/GCA_000715255.1_ASM71525v1	-	VRFCWCF MDRTB 17
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.6723	50.8	-	NLTI01	218	4986	4540	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279416	GCA_002232995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/232/995/GCA_002232995.1_ASM223299v1	-	MOD1-EC5079
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3164	204701	Proteobacteria	Gammaproteobacteria	4.93401	51.8	-	CJRJ01	50	5134	4742	3/21/15	2/27/17	Scaffold	SC	SAMEA1571902	GCA_001086425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/425/GCA_001086425.1_8525_3_55	-	Ke476
Staphylococcus aureus	1280	PRJNA348467	348467	Terrabacteria group	Firmicutes	2.76835	32.7	-	MLQH01	95	2867	2701	10/26/16	3/6/17	Contig	Christian Medical College	SAMN05908561	GCA_001855035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/035/GCA_001855035.1_ASM185503v1	-	VB44094
Staphylococcus aureus	1280	PRJNA348418	348418	Terrabacteria group	Firmicutes	2.76972	32.7	-	MLQJ01	48	2880	2716	10/26/16	3/6/17	Contig	Christian Medical College	SAMN05908352	GCA_001855045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/045/GCA_001855045.1_ASM185504v1	-	VB43011
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7215	52	-	CJGF01	55	4878	4522	3/21/15	2/27/17	Scaffold	SC	SAMEA2148235	GCA_001086485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/485/GCA_001086485.1_10561_2_62	-	np40
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.02292	50.6	-	NLTX01	243	5258	4873	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279381	GCA_002233015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/015/GCA_002233015.1_ASM223301v1	-	MOD1-EC5053
Mycobacterium tuberculosis	1773	PRJNA268716	268716	Terrabacteria group	Actinobacteria	4.31333	65.5	-	JTLP01	421	4326	3654	12/4/14	12/4/14	Contig	Vavilov Institute of General Genetics	SAMN03224141	GCA_000797435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/797/435/GCA_000797435.1_ASM79743v1	-	13-3935
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.19096	39.5	-	CHGV01	40	2429	2192	4/21/15	3/5/17	Scaffold	SC	SAMEA1025584	GCA_001342575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/575/GCA_001342575.1_6710_6_4	-	SMRU1348
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.12997	39.6	-	CGWV01	40	2403	2174	4/21/15	3/5/17	Scaffold	SC	SAMEA1025601	GCA_001342675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/675/GCA_001342675.1_6736_6_20	-	SMRU1268
Mycobacterium tuberculosis	1773	PRJNA311122	311122	Terrabacteria group	Actinobacteria	4.3551	65.5	-	LSFJ01	83	-	-	3/20/17	3/20/17	Contig	University of Hawaii at Manoa	SAMN04478384	GCA_002040725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/725/GCA_002040725.1_ASM204072v1	-	11L4601
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.65752	50.8	-	NLTQ01	136	4787	4528	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279401	GCA_002233035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/035/GCA_002233035.1_ASM223303v1	-	MOD1-EC5064
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72598	52	-	CJPI01	44	4879	4522	3/21/15	2/27/17	Scaffold	SC	SAMEA1572766	GCA_001087065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/065/GCA_001087065.1_8490_5_12	-	MDUST12
Staphylococcus aureus	1280	PRJNA348424	348424	Terrabacteria group	Firmicutes	2.72209	32.8	-	MLQA01	74	2818	2629	10/26/16	3/6/17	Contig	Christian Medical College	SAMN05908415	GCA_001855075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/075/GCA_001855075.1_ASM185507v1	-	2016
Staphylococcus aureus	1280	PRJNA348427	348427	Terrabacteria group	Firmicutes	2.97218	32.7	-	MLQB01	120	3169	2879	10/26/16	3/6/17	Contig	Christian Medical College	SAMN05908416	GCA_001855085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/085/GCA_001855085.1_ASM185508v1	-	VB1490
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72105	52	-	CILD01	55	4891	4504	3/21/15	2/27/17	Scaffold	SC	SAMEA2072661	GCA_001087105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/105/GCA_001087105.1_10349_1_65	-	ERL111998
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.74787	50.7	-	NLUB01	102	4901	4612	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279376	GCA_002233055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/055/GCA_002233055.1_ASM223305v1	-	MOD1-EC5048
Mycobacterium tuberculosis	1773	PRJNA360122	360122	Terrabacteria group	Actinobacteria	4.20168	65	-	NCTW01	595	4651	3841	4/21/17	4/21/17	Contig	All India Institute Of Medical Science	SAMN06203364	GCA_002104695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/695/GCA_002104695.1_ASM210469v1	-	AIIMS/LM/SS/PTB/EAI/L-823
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.16943	39.6	-	CGWX01	44	2412	2187	4/21/15	3/5/17	Scaffold	SC	SAMEA1025607	GCA_001342715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/715/GCA_001342715.1_6736_4_11	-	SMRU1211
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09839	39.6	-	CFFT01	60	2307	2070	3/15/15	3/5/17	Scaffold	SC	SAMEA1025610	GCA_001342735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/735/GCA_001342735.1_6805_5_17	-	SMRU1697
Mycobacterium tuberculosis	1773	PRJNA383158	383158	Terrabacteria group	Actinobacteria	4.31178	65.3	-	NDYU01	263	4400	3511	6/14/17	6/14/17	Contig	All India Institute Of Medical Science	SAMN06760364	GCA_002193045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/045/GCA_002193045.1_ASM219304v1	-	AIIMS/LM/SS/PTB/CAS/L-31
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.90431	50.7	-	NLTR01	211	5061	4767	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279400	GCA_002233075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/075/GCA_002233075.1_ASM223307v1	-	MOD1-EC5063
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.72073	52	-	CILM01	60	4866	4500	3/21/15	2/27/17	Scaffold	SC	SAMEA1406354	GCA_001087345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/345/GCA_001087345.1_7468_7_68	-	IB5355
Staphylococcus aureus	1280	PRJNA348462	348462	Terrabacteria group	Firmicutes	2.83329	32.7	-	MLQF01	176	2950	2752	10/26/16	3/6/17	Contig	Christian Medical College	SAMN05908533	GCA_001855115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/115/GCA_001855115.1_ASM185511v1	-	VB44746
Staphylococcus aureus	1280	PRJNA348465	348465	Terrabacteria group	Firmicutes	2.78837	32.6	-	MLQG01	167	2852	2676	10/26/16	3/6/17	Contig	Christian Medical College	SAMN05908536	GCA_001855145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/145/GCA_001855145.1_ASM185514v1	-	VB46389
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9324	51.8	-	CJNQ01	69	5125	4743	3/21/15	2/27/17	Scaffold	SC	SAMEA2155753	GCA_001087545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/545/GCA_001087545.1_10608_2_57	-	2004-006350
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.86252	50.8	-	NLTS01	250	5091	4779	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279399	GCA_002233095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/095/GCA_002233095.1_ASM223309v1	-	MOD1-EC5062
Mycobacterium tuberculosis	1773	PRJNA383287	383287	Terrabacteria group	Actinobacteria	4.28839	65.4	-	NDYV01	220	4371	3580	6/14/17	6/14/17	Contig	All India Institute Of Medical Science	SAMN06761088	GCA_002193075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/193/075/GCA_002193075.1_ASM219307v1	-	AIIMS/LM/SS/PTB/Beijing/L-182
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.13241	39.5	-	CHRU01	70	2357	2113	4/21/15	3/15/17	Scaffold	SC	SAMEA1025626	GCA_001342775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/775/GCA_001342775.1_6736_4_23	-	SMRU1223
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07436	39.5	-	CFBZ01	66	2274	2052	3/15/15	3/5/17	Scaffold	SC	SAMEA1025628	GCA_001342815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/815/GCA_001342815.1_6807_3_7	-	SMRU1615
Mycobacterium tuberculosis	1773	PRJNA247375	247375	Terrabacteria group	Actinobacteria	4.32387	65.4	-	JNGE01	169	-	-	6/19/14	7/31/14	Scaffold	Institut Pasteur Montevideo	SAMN02777055	GCA_000710415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/710/415/GCA_000710415.1_MtURU-002	25035326	MtURU-002
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.22699	50.5	-	NLTW01	211	5438	5050	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279382	GCA_002233105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/105/GCA_002233105.1_ASM223310v1	-	MOD1-EC5054
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73653	52	-	CJDV01	64	4886	4537	3/21/15	2/27/17	Scaffold	SC	SAMEA2158362	GCA_001087625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/625/GCA_001087625.1_10541_2_24	-	MDUST281
Staphylococcus aureus subsp. aureus	46170	PRJNA344949	344949	Terrabacteria group	Firmicutes	2.84759	32.8	-	MOPB01	86	3011	2792	11/16/16	3/6/17	Contig	University of Turin	SAMN05853567	GCA_001879295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/879/295/GCA_001879295.1_StAu00v1	-	ATCC 29213
Staphylococcus aureus	1280	PRJNA345163	345163	Terrabacteria group	Firmicutes	2.78913	32.7	-	MKYX01	48	2918	2786	12/9/16	3/6/17	Contig	Hospital Universitario 12 de Octubre	SAMN05858801	GCA_001899895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/895/GCA_001899895.1_ASM189989v1	-	SA_103
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.76909	52.1	-	CJYL01	41	4941	4576	3/21/15	2/27/17	Scaffold	SC	SAMEA2059366	GCA_001087725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/725/GCA_001087725.1_9953_5_67	-	LNT1339
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.4814	50.4	-	NLUN01	429	5826	5321	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279352	GCA_002233135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/135/GCA_002233135.1_ASM223313v1	-	MOD1-EC5024
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.09594	65	-	CQPS01	1668	4395	4347	3/22/15	6/13/15	Scaffold	SC	SAMEA1706707	GCA_001086845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/845/GCA_001086845.1_4925_1_2	-	C09400866
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.07375	39.7	-	CFGF01	65	2298	2084	3/15/15	3/5/17	Scaffold	SC	SAMEA1025642	GCA_001342875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/875/GCA_001342875.1_6805_3_10	-	SMRU1450
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.11341	39.6	-	CFHS01	60	2300	2049	3/15/15	3/5/17	Scaffold	SC	SAMEA1025646	GCA_001342915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/915/GCA_001342915.1_6805_3_11	-	SMRU1451
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.01748	64.8	-	CQPZ01	1739	4419	4367	3/23/15	6/13/15	Scaffold	SC	SAMEA1706701	GCA_001088145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/145/GCA_001088145.1_4925_1_9	-	E09700455
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.29772	50.4	-	NLUI01	281	5581	5190	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279358	GCA_002233155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/155/GCA_002233155.1_ASM223315v1	-	MOD1-EC5030
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.83051	52	-	CJBP01	55	5026	4630	3/21/15	2/27/17	Scaffold	SC	SAMEA2160273	GCA_001088065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/065/GCA_001088065.1_10493_1_31	-	MDUST184
Staphylococcus aureus	1280	PRJNA345163	345163	Terrabacteria group	Firmicutes	2.8325	32.9	-	MKYY01	106	2925	2769	12/9/16	3/6/17	Contig	Hospital Universitario 12 de Octubre	SAMN05858806	GCA_001899925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/925/GCA_001899925.1_ASM189992v1	-	SA_107
Staphylococcus aureus	1280	PRJNA345163	345163	Terrabacteria group	Firmicutes	2.71511	32.8	-	MKYZ01	21	2779	2637	12/9/16	3/6/17	Contig	Hospital Universitario 12 de Octubre	SAMN05858808	GCA_001899935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/935/GCA_001899935.1_ASM189993v1	-	SA_123
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73258	52.1	-	CJCZ01	55	4909	4547	3/21/15	2/27/17	Scaffold	SC	SAMEA2155750	GCA_001088085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/085/GCA_001088085.1_10493_1_83	-	MDUST401
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.0208	50.5	-	NLTT01	153	5166	4817	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279398	GCA_002233175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/175/GCA_002233175.1_ASM223317v1	-	MOD1-EC5061
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	3.87962	64.6	-	CQPL01	2081	4430	4386	3/22/15	6/13/15	Scaffold	SC	SAMEA1706687	GCA_001093985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/985/GCA_001093985.1_4925_1_11	-	E09701106
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.10415	39.7	-	CHRY01	60	2334	2107	4/21/15	3/11/17	Scaffold	SC	SAMEA1025654	GCA_001342935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/935/GCA_001342935.1_6736_6_16	-	SMRU1264
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.08993	39.6	-	CHSU01	62	2309	2060	4/21/15	3/11/17	Scaffold	SC	SAMEA1025659	GCA_001342955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/955/GCA_001342955.1_6736_6_15	-	SMRU1263
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	3.93564	64.8	-	CQPT01	2271	4392	4347	3/23/15	6/13/15	Scaffold	SC	SAMEA1706661	GCA_001108845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/845/GCA_001108845.1_4925_1_4	-	C00401055
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.73508	50.6	-	NLUJ01	90	4829	4511	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279357	GCA_002233195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/195/GCA_002233195.1_ASM223319v1	-	MOD1-EC5029
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73771	52	-	CJSP01	45	4897	4539	3/21/15	2/27/17	Scaffold	SC	SAMEA1903854	GCA_001088305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/305/GCA_001088305.1_9475_6_29	-	1022981
Staphylococcus aureus	1280	PRJNA345163	345163	Terrabacteria group	Firmicutes	2.69764	32.8	-	MKZA01	34	2748	2613	12/9/16	3/6/17	Contig	Hospital Universitario 12 de Octubre	SAMN05858809	GCA_001899965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/965/GCA_001899965.1_ASM189996v1	-	SA_520
Staphylococcus aureus	1280	PRJNA345163	345163	Terrabacteria group	Firmicutes	2.74997	32.7	-	MKZB01	41	2861	2717	12/9/16	3/6/17	Contig	Hospital Universitario 12 de Octubre	SAMN05858826	GCA_001899975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/975/GCA_001899975.1_ASM189997v1	-	SA_10009
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71415	52.1	-	CJBT01	44	4891	4523	3/21/15	2/27/17	Scaffold	SC	SAMEA1964708	GCA_001088965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/088/965/GCA_001088965.1_10493_1_37	-	MDUST205
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.32472	50.5	-	NLTV01	228	5568	5165	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279383	GCA_002233215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/215/GCA_002233215.1_ASM223321v1	-	MOD1-EC5055
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.03256	64.7	-	CQPV01	1635	4497	4452	3/23/15	6/14/15	Scaffold	SC	SAMEA1706678	GCA_001112945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/945/GCA_001112945.1_4925_1_6	-	D00000071
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	1.96937	39.7	-	CFGG01	47	2163	1960	3/15/15	3/11/17	Scaffold	SC	SAMEA1025663	GCA_001342975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/975/GCA_001342975.1_6830_3_18	-	SMRU1650
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.06633	39.5	-	CGWY01	63	2264	2029	4/21/15	3/11/17	Scaffold	SC	SAMEA1025670	GCA_001343015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/015/GCA_001343015.1_6753_1_3	-	SMRU1467
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.09515	65	-	CQPR01	1830	4373	4322	3/23/15	6/14/15	Scaffold	SC	SAMEA1706703	GCA_001144065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/065/GCA_001144065.1_4925_1_10	-	E09701191
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.22112	50.5	-	NLTU01	187	5427	5048	7/25/17	8/1/17	Contig	FDA/CFSAN	SAMN04279384	GCA_002233235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/235/GCA_002233235.1_ASM223323v1	-	MOD1-EC5056
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93015	51.8	-	CJLT01	55	5136	4749	3/21/15	2/27/17	Scaffold	SC	SAMEA2158627	GCA_001089065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/065/GCA_001089065.1_10607_1_63	-	2002-214318
Staphylococcus aureus	1280	PRJNA345163	345163	Terrabacteria group	Firmicutes	2.67955	32.7	-	MKZD01	31	2747	2619	12/9/16	3/6/17	Contig	Hospital Universitario 12 de Octubre	SAMN05858838	GCA_001900005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/005/GCA_001900005.1_ASM190000v1	-	SA_70002
Staphylococcus aureus	1280	PRJNA345163	345163	Terrabacteria group	Firmicutes	2.71297	32.7	-	MKZC01	47	2804	2677	12/9/16	3/6/17	Contig	Hospital Universitario 12 de Octubre	SAMN05858837	GCA_001900015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/015/GCA_001900015.1_ASM190001v1	-	SA_10014
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72411	52.1	-	CIWY01	54	4920	4512	3/21/15	2/27/17	Scaffold	SC	SAMEA2072808	GCA_001089225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/225/GCA_001089225.1_10349_1_39	-	ERL084170
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.9217	50.5	-	NLUC01	181	5109	4805	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279375	GCA_002233245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/245/GCA_002233245.1_ASM223324v1	-	MOD1-EC5047
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	3.9388	64.7	-	CQPW01	2132	4440	4393	3/22/15	6/13/15	Scaffold	SC	SAMEA1706668	GCA_001145965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/965/GCA_001145965.1_4925_1_8	-	D00700688
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.14426	39.5	-	CHSJ01	52	2330	2105	4/21/15	3/11/17	Scaffold	SC	SAMEA1025672	GCA_001343035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/035/GCA_001343035.1_6736_7_5	-	SMRU1277
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.03439	39.7	-	CHST01	52	2232	1998	4/21/15	3/11/17	Scaffold	SC	SAMEA1025675	GCA_001343055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/055/GCA_001343055.1_6736_6_14	-	SMRU1262
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	12.7054	70.1	-	CPWZ01	11971	11038	10937	3/22/15	6/13/15	Scaffold	SC	SAMEA1317640	GCA_001160225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/225/GCA_001160225.1_7414_6_1	-	401416
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.05526	50.6	-	NLUV01	186	5306	4924	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279331	GCA_002233275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/275/GCA_002233275.1_ASM223327v1	-	MOD1-EC5003
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.68935	52.1	-	CIXL01	55	4841	4466	3/21/15	2/27/17	Scaffold	SC	SAMEA2072906	GCA_001089345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/345/GCA_001089345.1_10349_1_50	-	ERL0983
Staphylococcus aureus	1280	PRJNA345163	345163	Terrabacteria group	Firmicutes	2.7651	32.7	-	MKZE01	73	2863	2688	12/9/16	3/6/17	Contig	Hospital Universitario 12 de Octubre	SAMN05859285	GCA_001900045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/045/GCA_001900045.1_ASM190004v1	-	SA_80001
Staphylococcus aureus	1280	PRJNA345163	345163	Terrabacteria group	Firmicutes	2.77143	32.7	-	MKZF01	30	2870	2749	12/9/16	3/6/17	Contig	Hospital Universitario 12 de Octubre	SAMN05860625	GCA_001900065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/065/GCA_001900065.1_ASM190006v1	-	SA_80004
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72023	52	-	CJCF01	54	4879	4516	3/21/15	2/27/17	Scaffold	SC	SAMEA2154349	GCA_001089365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/365/GCA_001089365.1_10493_1_55	-	MDUST283
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.45296	49.7	-	NLUU01	323	5806	5319	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279332	GCA_002233295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/295/GCA_002233295.1_ASM223329v1	-	MOD1-EC5004
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	3.83602	64.7	-	CQQC01	3316	4637	4599	3/23/15	6/14/15	Scaffold	SC	SAMEA1706655	GCA_001168405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/405/GCA_001168405.1_4925_1_5	-	D00501624
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.1365	39.5	-	CFEA01	52	2328	2112	3/15/15	3/11/17	Scaffold	SC	SAMEA1025677	GCA_001343075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/075/GCA_001343075.1_6736_4_22	-	SMRU1222
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.09529	39.5	-	CHUY01	77	2326	2079	4/21/15	3/11/17	Scaffold	SC	SAMEA1025681	GCA_001343115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/115/GCA_001343115.1_6841_7_11	-	SMRU1331
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.32657	65.4	-	CQRL01	229	4261	4207	3/23/15	6/13/15	Scaffold	SC	SAMEA1706669	GCA_001173265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/265/GCA_001173265.1_5227_5_1	-	J09400698
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.92412	50.5	-	NLUD01	113	5151	4802	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279374	GCA_002233315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/315/GCA_002233315.1_ASM223331v1	-	MOD1-EC5046
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73862	52	-	CJYC01	49	4902	4544	3/21/15	2/27/17	Scaffold	SC	SAMEA2056529	GCA_001089465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/465/GCA_001089465.1_9953_5_57	-	A394
Staphylococcus aureus	1280	PRJNA345163	345163	Terrabacteria group	Firmicutes	2.93915	33	-	MKZG01	197	3049	2905	12/9/16	3/6/17	Contig	Hospital Universitario 12 de Octubre	SAMN05860627	GCA_001900085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/085/GCA_001900085.1_ASM190008v1	-	SA_170006
Staphylococcus aureus	1280	PRJNA345163	345163	Terrabacteria group	Firmicutes	2.74959	32.8	-	MKZH01	27	2824	2696	12/9/16	3/6/17	Contig	Hospital Universitario 12 de Octubre	SAMN05860635	GCA_001900095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/095/GCA_001900095.1_ASM190009v1	-	SA_170015
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82567	52	-	CEXH01	57	5028	4644	3/10/15	2/27/17	Scaffold	SC	SAMEA2072814	GCA_001089545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/545/GCA_001089545.1_10349_1_57	-	ERL10320
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.13823	50.6	-	NLUE01	224	5418	5078	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279372	GCA_002233325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/325/GCA_002233325.1_ASM223332v1	-	MOD1-EC5044
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.17141	64.5	-	CRZK01	1114	4568	4515	3/23/15	6/14/15	Scaffold	SC	SAMEA968186	GCA_001194365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/365/GCA_001194365.1_6505_1_8	-	G00000978
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.24939	39.4	-	CHVG01	84	2521	2233	4/21/15	3/11/17	Scaffold	SC	SAMEA1025708	GCA_001343135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/135/GCA_001343135.1_6899_6_19	-	SMRU2083
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.13453	39.7	-	CICH01	57	2314	2043	4/21/15	3/11/17	Scaffold	SC	SAMEA1025712	GCA_001343155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/155/GCA_001343155.1_6823_2_20	-	SMRU1892
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.15564	64.3	-	CSAM01	954	4630	4577	3/23/15	6/14/15	Scaffold	SC	SAMEA968137	GCA_001196295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/295/GCA_001196295.1_6505_4_11	-	M09502139
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.98933	50.7	-	NLUF01	172	5225	4846	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279368	GCA_002233355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/355/GCA_002233355.1_ASM223335v1	-	MOD1-EC5040
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72849	52.1	-	CJJG01	50	4918	4560	3/21/15	2/27/17	Scaffold	SC	SAMEA1930221	GCA_001089625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/625/GCA_001089625.1_10592_2_40	-	Jul-65
Staphylococcus aureus	1280	PRJNA345163	345163	Terrabacteria group	Firmicutes	2.79825	32.7	-	MKZI01	36	2897	2782	12/9/16	3/6/17	Contig	Hospital Universitario 12 de Octubre	SAMN05860689	GCA_001900115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/115/GCA_001900115.1_ASM190011v1	-	SA_180009
Staphylococcus aureus	1280	PRJNA345163	345163	Terrabacteria group	Firmicutes	2.75672	32.7	-	MKZJ01	49	2869	2762	12/9/16	3/6/17	Contig	Hospital Universitario 12 de Octubre	SAMN05860690	GCA_001900145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/145/GCA_001900145.1_ASM190014v1	-	SA_180015
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70289	52.1	-	CJSD01	42	4858	4506	3/21/15	2/27/17	Scaffold	SC	SAMEA1903825	GCA_001089805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/805/GCA_001089805.1_9475_6_1	-	1010996
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.99056	50.7	-	NLUH01	239	5274	4921	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279360	GCA_002233375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/375/GCA_002233375.1_ASM223337v1	-	MOD1-EC5032
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.21725	64.7	-	CSAP01	613	4435	4381	3/22/15	6/12/15	Scaffold	SC	SAMEA968193	GCA_001196715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/715/GCA_001196715.1_6505_4_1	-	K09901972
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12363	39.7	-	CHAJ01	61	2291	2032	4/21/15	3/11/17	Scaffold	SC	SAMEA1025734	GCA_001343215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/215/GCA_001343215.1_7038_8_31	-	SMRU2239
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.23865	39.4	-	CFCC01	106	2477	2234	3/15/15	3/11/17	Scaffold	SC	SAMEA1025763	GCA_001343315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/315/GCA_001343315.1_6899_4_15	-	SMRU2031
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.06641	64.2	-	CSAD01	1558	4703	4654	3/23/15	6/13/15	Scaffold	SC	SAMEA968091	GCA_001196935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/935/GCA_001196935.1_6505_1_6	-	G09801536
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.7477	50.4	-	NLUO01	404	6217	5716	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279350	GCA_002233385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/385/GCA_002233385.1_ASM223338v1	-	MOD1-EC5022
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.77632	52	-	CJFM01	67	4969	4584	3/21/15	2/27/17	Scaffold	SC	SAMEA2147606	GCA_001089985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/089/985/GCA_001089985.1_10561_2_34	-	np103
Staphylococcus aureus	1280	PRJNA345163	345163	Terrabacteria group	Firmicutes	2.76544	32.9	-	MKZK01	78	2865	2736	12/9/16	3/6/17	Contig	Hospital Universitario 12 de Octubre	SAMN05860691	GCA_001900165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/900/165/GCA_001900165.1_ASM190016v1	-	SA_190006
Staphylococcus aureus	1280	PRJNA355562	355562	Terrabacteria group	Firmicutes	2.63002	33.6	-	MSFF01	123	2574	2443	12/24/16	3/6/17	Contig	Universidade Federal da Bahia	SAMN06077116	GCA_001921685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/921/685/GCA_001921685.1_C18	-	C18
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2770	204451	Proteobacteria	Gammaproteobacteria	4.75565	52	-	CJRV01	42	4921	4563	3/21/15	2/27/17	Scaffold	SC	SAMEA1687861	GCA_001090265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/265/GCA_001090265.1_8616_4_51	-	BCR211
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.92104	50.5	-	NLUG01	110	5143	4802	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279364	GCA_002233395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/395/GCA_002233395.1_ASM223339v1	-	MOD1-EC5036
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	1.35801	61.5	-	CSAY01	4017	987	984	3/22/15	6/13/15	Scaffold	SC	SAMEA968089	GCA_001197475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/197/475/GCA_001197475.1_6505_5_8	-	N09901774
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09415	39.6	-	CHHR01	74	2300	2052	4/21/15	3/11/17	Scaffold	SC	SAMEA1025768	GCA_001343335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/335/GCA_001343335.1_6840_3_19	-	SMRU1819
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.24198	39.7	-	CHHM01	166	2575	2164	4/21/15	3/14/17	Scaffold	SC	SAMEA1025778	GCA_001343375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/375/GCA_001343375.1_6823_1_24	-	SMRU1872
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	1.94869	62.7	-	CSAV01	5685	1535	1530	3/22/15	6/13/15	Scaffold	SC	SAMEA968097	GCA_001199055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/055/GCA_001199055.1_6505_5_3	-	N00000221
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.2536	50.5	-	NLUP01	246	5615	5185	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279349	GCA_002233435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/435/GCA_002233435.1_ASM223343v1	-	MOD1-EC5021
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73318	52	-	CJCA01	48	4893	4540	3/21/15	2/27/17	Scaffold	SC	SAMEA2161865	GCA_001090325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/325/GCA_001090325.1_10493_1_51	-	MDUST276
Staphylococcus aureus	1280	PRJNA355562	355562	Terrabacteria group	Firmicutes	2.69228	32.7	-	MSFE01	36	2751	2655	12/24/16	3/6/17	Contig	Universidade Federal da Bahia	SAMN06077115	GCA_001921695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/921/695/GCA_001921695.1_C80	-	C80
Staphylococcus aureus subsp. aureus ST398	523796	PRJNA279228	279228	Terrabacteria group	Firmicutes	2.75228	32.8	-	LAWV01	45	2830	2683	1/9/17	3/6/17	Contig	University of Copenhagen	SAMN03450776	GCA_001940425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/425/GCA_001940425.1_ASM194042v1	-	55488
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71825	52	-	CJMQ01	42	4879	4524	3/21/15	2/27/17	Scaffold	SC	SAMEA2162032	GCA_001090505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/505/GCA_001090505.1_10607_2_32	-	A59217
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.74654	50.8	-	NLUR01	112	4875	4611	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279338	GCA_002233455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/455/GCA_002233455.1_ASM223345v1	-	MOD1-EC5010
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	3.20926	62.7	-	CSAU01	5759	5214	5193	3/23/15	6/14/15	Scaffold	SC	SAMEA968139	GCA_001200395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/395/GCA_001200395.1_6505_5_2	-	M00201208
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10865	39.6	-	CFCD01	33	2323	2058	3/15/15	3/11/17	Scaffold	SC	SAMEA1025798	GCA_001343415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/415/GCA_001343415.1_6925_3_19	-	SMRU2131
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08423	39.5	-	CHUZ01	98	2287	2060	4/21/15	3/11/17	Scaffold	SC	SAMEA1025802	GCA_001343455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/455/GCA_001343455.1_6823_7_1	-	SMRU1993
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.15418	64.8	-	CRZQ01	998	4407	4352	3/23/15	6/13/15	Scaffold	SC	SAMEA968093	GCA_001202635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/635/GCA_001202635.1_6505_1_4	-	F00001728
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.78335	50.6	-	NLUT01	93	4926	4639	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279333	GCA_002233475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/475/GCA_002233475.1_ASM223347v1	-	MOD1-EC5005
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7228	52	-	CIXF01	53	4878	4509	3/21/15	2/27/17	Scaffold	SC	SAMEA2072651	GCA_001090585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/585/GCA_001090585.1_10349_1_46	-	ERL091797
Staphylococcus aureus	1280	PRJNA360116	360116	Terrabacteria group	Firmicutes	2.82095	32.7	-	MTFQ01	44	2986	2777	1/18/17	3/6/17	Contig	University of Tennessee	SAMN06217789	GCA_001953735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/735/GCA_001953735.1_ASM195373v1	-	Wood 46
Staphylococcus aureus	1280	PRJNA343109	343109	Terrabacteria group	Firmicutes	2.76785	32.8	-	MOMP01	48	2866	2708	2/1/17	3/6/17	Contig	Universidad del Desarrollo	SAMN05773537	GCA_001982965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/965/GCA_001982965.1_ASM198296v1	-	AL-699
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82308	52	-	CJBH01	76	5020	4581	3/21/15	2/27/17	Scaffold	SC	SAMEA2163551	GCA_001090905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/905/GCA_001090905.1_10493_1_12	-	MDUST132
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.25292	50.4	-	NLUQ01	174	5526	5126	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279348	GCA_002233495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/495/GCA_002233495.1_ASM223349v1	-	MOD1-EC5020
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.26485	64.9	-	CSAC01	454	4332	4277	3/23/15	6/14/15	Scaffold	SC	SAMEA968182	GCA_001203995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/995/GCA_001203995.1_6505_2_1	-	H00200930
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.05879	39.5	-	CGYV01	63	2275	2042	4/21/15	3/11/17	Scaffold	SC	SAMEA1025807	GCA_001343475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/475/GCA_001343475.1_6925_3_17	-	SMRU2129
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.06501	39.6	-	CFEI01	60	2272	2046	3/15/15	3/11/17	Scaffold	SC	SAMEA1025836	GCA_001343515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/515/GCA_001343515.1_6823_7_3	-	SMRU1995
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	3.59007	63.3	-	CSBK01	5651	5733	5703	3/23/15	6/14/15	Scaffold	SC	SAMEA968217	GCA_001204615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/615/GCA_001204615.1_6505_5_9	-	N09902308
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.16945	50.4	-	NLUS01	127	5326	5026	7/25/17	7/28/17	Contig	FDA/CFSAN	SAMN04279337	GCA_002233505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/233/505/GCA_002233505.1_ASM223350v1	-	MOD1-EC5009
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93285	51.8	-	CJVJ01	73	5127	4746	3/21/15	2/27/17	Scaffold	SC	SAMEA1968265	GCA_001090965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/090/965/GCA_001090965.1_9870_8_51	-	2010-021566
Staphylococcus aureus	1280	PRJNA343109	343109	Terrabacteria group	Firmicutes	2.77959	32.8	-	MOMQ01	67	2863	2702	2/1/17	3/6/17	Contig	Universidad del Desarrollo	SAMN05773538	GCA_001982975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/975/GCA_001982975.1_ASM198297v1	-	AL-492
Staphylococcus aureus	1280	PRJNA343109	343109	Terrabacteria group	Firmicutes	2.67858	32.8	-	MOMR01	97	2757	2589	2/1/17	3/6/17	Contig	Universidad del Desarrollo	SAMN05773539	GCA_001983025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/025/GCA_001983025.1_ASM198302v1	-	MT-0541
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7341	52	-	CJLC01	47	4903	4540	3/21/15	2/27/17	Scaffold	SC	SAMEA1930189	GCA_001091105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/105/GCA_001091105.1_10593_2_60	-	E01-0407
Escherichia coli	562	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.34178	50.6	-	NIUI01	120	5661	5284	8/2/17	8/4/17	Contig	JCVI	SAMN07203014	GCA_002239785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/785/GCA_002239785.1_ASM223978v1	-	ESBL-SIUE-16
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.96006	63.3	-	CQTO01	2471	4373	4316	3/22/15	6/12/15	Scaffold	SC	SAMEA968168	GCA_001205115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/115/GCA_001205115.1_5237_6_5	-	R09601315
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10645	39.5	-	CHHN01	55	2309	2077	4/21/15	3/11/17	Scaffold	SC	SAMEA1025839	GCA_001343535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/535/GCA_001343535.1_6823_2_3	-	SMRU1875
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08121	39.7	-	CGZQ01	146	2227	1989	4/21/15	3/11/17	Scaffold	SC	SAMEA1025844	GCA_001343555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/555/GCA_001343555.1_6983_4_74	-	SMRU2282
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	1.94376	62.5	-	CSBI01	5453	1621	1617	3/23/15	6/14/15	Scaffold	SC	SAMEA968165	GCA_001207015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/015/GCA_001207015.1_6505_5_6	-	N09901618
Escherichia coli	562	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.34104	50.6	-	NIUH01	131	5671	5287	8/2/17	8/4/17	Contig	JCVI	SAMN07203015	GCA_002239795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/239/795/GCA_002239795.1_ASM223979v1	-	ESBL-SIPE-13
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2770	204451	Proteobacteria	Gammaproteobacteria	4.85525	52	-	CILS01	45	5056	4675	3/21/15	2/27/17	Scaffold	SC	SAMEA1687860	GCA_001091245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/245/GCA_001091245.1_8616_4_49	-	BCR177
Staphylococcus aureus	1280	PRJNA343109	343109	Terrabacteria group	Firmicutes	2.70379	32.8	-	MOMS01	152	2802	2626	2/1/17	3/6/17	Contig	Universidad del Desarrollo	SAMN05773540	GCA_001983065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/065/GCA_001983065.1_ASM198306v1	-	AL-704
Staphylococcus aureus	1280	PRJNA343109	343109	Terrabacteria group	Firmicutes	2.69404	32.8	-	MOMU01	154	2782	2610	2/1/17	3/6/17	Contig	Universidad del Desarrollo	SAMN05773542	GCA_001983085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/085/GCA_001983085.1_ASM198308v1	-	MT-0509
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72797	52	-	CJPE01	41	4887	4527	3/21/15	2/27/17	Scaffold	SC	SAMEA1572862	GCA_001091385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/385/GCA_001091385.1_8447_8_7	-	MDUST79
Escherichia coli	562	PRJNA361484	361484	Proteobacteria	Gammaproteobacteria	4.86888	50.6	-	NIHJ01	131	5134	4710	8/4/17	8/6/17	Contig	University of Sao Paulo	SAMN07194419	GCA_002240935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/935/GCA_002240935.1_ASM224093v1	-	ICBEc07
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.23585	64.7	-	CSAN01	505	4399	4345	3/23/15	6/13/15	Scaffold	SC	SAMEA968205	GCA_001207715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/715/GCA_001207715.1_6505_4_3	-	K00500133
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1588	39.5	-	CICS01	86	2391	2174	4/21/15	3/11/17	Scaffold	SC	SAMEA1025851	GCA_001343595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/595/GCA_001343595.1_6899_4_5	-	SMRU2021
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10468	39.7	-	CFDC01	66	2334	2108	3/15/15	3/11/17	Scaffold	SC	SAMEA1025858	GCA_001343675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/675/GCA_001343675.1_6823_4_12	-	SMRU1932
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.13684	64.6	-	CSAB01	1144	4557	4505	3/23/15	6/14/15	Scaffold	SC	SAMEA968092	GCA_001208125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/125/GCA_001208125.1_6505_1_5	-	F00201178
Escherichia coli	562	PRJNA361484	361484	Proteobacteria	Gammaproteobacteria	5.28623	50.6	-	NIHF01	215	5498	5107	8/4/17	8/6/17	Contig	University of Sao Paulo	SAMN07193451	GCA_002240945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/945/GCA_002240945.1_ASM224094v1	-	ICBEcBL-III-02(2)
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.97825	52.1	-	CQGS01	47	5153	4876	3/23/15	2/27/17	Scaffold	SC	SAMEA1568548	GCA_001091445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/445/GCA_001091445.1_8490_2_44	-	CH1
Staphylococcus aureus	1280	PRJNA343109	343109	Terrabacteria group	Firmicutes	2.73468	32.8	-	MOMT01	202	2866	2677	2/1/17	3/9/17	Contig	Universidad del Desarrollo	SAMN05773541	GCA_001983095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/095/GCA_001983095.1_ASM198309v1	-	MT-0557
Staphylococcus aureus	1280	PRJNA343109	343109	Terrabacteria group	Firmicutes	2.75442	32.7	-	MOMV01	37	2852	2697	2/1/17	3/6/17	Contig	Universidad del Desarrollo	SAMN05773543	GCA_001983125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/983/125/GCA_001983125.1_ASM198312v1	-	MT-0363
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7248	52	-	CJPQ01	42	4889	4537	3/21/15	2/27/17	Scaffold	SC	SAMEA1572795	GCA_001091525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/525/GCA_001091525.1_8490_5_25	-	MDUST25
Escherichia coli	562	PRJNA361484	361484	Proteobacteria	Gammaproteobacteria	5.05939	50.6	-	NIHG01	118	5153	4811	8/4/17	8/6/17	Contig	University of Sao Paulo	SAMN07193647	GCA_002240955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/955/GCA_002240955.1_ASM224095v1	-	ICBEc09
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.00582	63.5	-	CSAJ01	1608	5092	5046	3/23/15	6/14/15	Scaffold	SC	SAMEA968136	GCA_001208505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/505/GCA_001208505.1_6505_4_10	-	M09401471
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10304	39.6	-	CFDW01	79	2322	2081	3/15/15	3/11/17	Scaffold	SC	SAMEA1025877	GCA_001343835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/835/GCA_001343835.1_6983_4_93	-	SMRU2301
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.22331	39.5	-	CFDJ01	73	2490	2241	3/15/15	3/11/17	Scaffold	SC	SAMEA1025878	GCA_001343855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/855/GCA_001343855.1_6871_1_18	-	SMRU1794
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.22049	65	-	CSAO01	550	4279	4224	3/23/15	6/14/15	Scaffold	SC	SAMEA968206	GCA_001208685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/685/GCA_001208685.1_6505_4_4	-	L00201493
Escherichia coli	562	PRJNA361484	361484	Proteobacteria	Gammaproteobacteria	5.19787	50.5	-	NIHI01	127	5361	4927	8/4/17	8/6/17	Contig	University of Sao Paulo	SAMN07194198	GCA_002240965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/240/965/GCA_002240965.1_ASM224096v1	-	ICBEc03
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7378	52	-	CJWY01	58	4890	4540	3/21/15	2/27/17	Scaffold	SC	SAMEA2057239	GCA_001091665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/665/GCA_001091665.1_9953_5_2	-	A140
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.63335	32.7	-	MTJB01	65	2726	2625	2/13/17	2/22/17	Contig	Univ Mississippi Medical Center	SAMN06209068	GCA_001996415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/415/GCA_001996415.1_ASM199641v1	-	Transconjugant 23A
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.64986	32.7	-	MTJA01	63	2772	2646	2/13/17	2/22/17	Contig	Univ Mississippi Medical Center	SAMN06209066	GCA_001996465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/465/GCA_001996465.1_ASM199646v1	-	Transconjugant 21A
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93345	51.8	-	CJNA01	55	5138	4751	3/21/15	2/27/17	Scaffold	SC	SAMEA2160899	GCA_001091785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/785/GCA_001091785.1_10608_2_13	-	2010-018908
Escherichia coli	562	PRJNA361484	361484	Proteobacteria	Gammaproteobacteria	5.42785	50.3	-	NIHH01	178	5682	5295	8/4/17	8/6/17	Contig	University of Sao Paulo	SAMN07193666	GCA_002241025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/241/025/GCA_002241025.1_ASM224102v1	-	ICBEcBL-II-11(1)
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	3.99225	63	-	CSAE01	1581	5420	5376	3/22/15	6/13/15	Scaffold	SC	SAMEA968201	GCA_001211145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/145/GCA_001211145.1_6505_2_10	-	K00500041
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.0657	39.7	-	CFBH01	53	2274	2069	3/15/15	3/5/17	Scaffold	SC	SAMEA1025883	GCA_001343895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/895/GCA_001343895.1_6823_1_22	-	SMRU1870
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.22483	39.6	-	CHUV01	78	2450	2210	4/21/15	3/5/17	Scaffold	SC	SAMEA1025892	GCA_001343935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/935/GCA_001343935.1_6823_5_2	-	SMRU1946
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.24087	64.9	-	CSAA01	658	4342	4291	3/22/15	6/12/15	Scaffold	SC	SAMEA968185	GCA_001211585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/585/GCA_001211585.1_6505_1_9	-	G00001233
Escherichia coli	562	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.15321	50.4	-	NQBA01	104	5371	5011	8/11/17	8/15/17	Contig	JCVI	SAMN07450674	GCA_002247425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/425/GCA_002247425.1_ASM224742v1	-	ECH+09
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74595	52.1	-	CJST01	53	4909	4545	3/21/15	2/27/17	Scaffold	SC	SAMEA1903829	GCA_001091845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/091/845/GCA_001091845.1_9475_6_4	-	1019515
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.66954	32.7	-	MUDT01	67	2753	2655	2/13/17	2/22/17	Contig	Univ Mississippi Medical Center	SAMN06203848	GCA_001996485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/485/GCA_001996485.1_ASM199648v1	-	Transconjugant 1A
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.59654	32.8	-	MUDS01	626	2753	2525	2/13/17	2/22/17	Contig	Univ Mississippi Medical Center	SAMN06209078	GCA_001996505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/505/GCA_001996505.1_ASM199650v1	-	RN4220RS
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72744	52.1	-	CIYW01	43	4896	4543	3/21/15	2/27/17	Scaffold	SC	SAMEA2143229	GCA_001092205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/205/GCA_001092205.1_10492_1_1	-	MDUST106
Escherichia coli	562	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.06256	50.5	-	NQCP01	138	5404	4871	8/11/17	8/15/17	Contig	JCVI	SAMN07450613	GCA_002247965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/965/GCA_002247965.1_ASM224796v1	-	ECCTRSRTH06
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	3.7404	64.4	-	CGCX01	4470	4703	4668	3/15/15	6/13/15	Scaffold	SC	SAMEA1706700	GCA_001318065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/065/GCA_001318065.1_4925_1_3	-	C09601061
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.04902	39.6	-	CIKN01	77	2237	2013	4/21/15	3/5/17	Scaffold	SC	SAMEA1025928	GCA_001343995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/995/GCA_001343995.1_6899_5_2	-	SMRU2042
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10533	39.6	-	CGYP01	90	2312	2059	4/21/15	3/5/17	Scaffold	SC	SAMEA1025935	GCA_001344015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/015/GCA_001344015.1_6899_4_7	-	SMRU2023
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	1.92212	62.6	-	CGDO01	5360	2473	2457	3/15/15	6/13/15	Scaffold	SC	SAMEA968090	GCA_001318165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/165/GCA_001318165.1_6505_5_7	-	N09901297
Escherichia coli	562	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.20179	50.8	-	NQDK01	133	5467	5098	8/11/17	8/15/17	Contig	JCVI	SAMN07450661	GCA_002248225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/225/GCA_002248225.1_ASM224822v1	-	ECH+22
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.72172	52	-	CJOC01	55	4875	4509	3/21/15	2/27/17	Scaffold	SC	SAMEA1406361	GCA_001092385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/385/GCA_001092385.1_7468_7_64	-	IB5351
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.70044	32.7	-	MUDU01	109	2825	2719	2/13/17	2/22/17	Contig	Univ Mississippi Medical Center	SAMN06209077	GCA_001996525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/525/GCA_001996525.1_ASM199652v1	-	Transconjugant 8B
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.70007	32.7	-	MUDV01	52	2849	2720	2/13/17	2/22/17	Contig	Univ Mississippi Medical Center	SAMN06209070	GCA_001996545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/545/GCA_001996545.1_ASM199654v1	-	Transconjugant 1B
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72196	52	-	CJIF01	55	4881	4512	3/21/15	2/27/17	Scaffold	SC	SAMEA2158279	GCA_001092485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/485/GCA_001092485.1_10562_2_77	-	MDUST398
Escherichia coli	562	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.34222	50.6	-	NQDM01	127	5653	5284	8/11/17	8/15/17	Contig	JCVI	SAMN07450659	GCA_002248255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/255/GCA_002248255.1_ASM224825v1	-	ECPUTH02
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.21139	64.9	-	CIAE01	743	4438	4384	4/21/15	6/13/15	Scaffold	SC	SAMEA968095	GCA_001318285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/285/GCA_001318285.1_6505_1_2	-	E09801032
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09043	39.7	-	CGYZ01	61	2313	2094	4/21/15	3/5/17	Scaffold	SC	SAMEA1025940	GCA_001344055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/055/GCA_001344055.1_6925_3_8	-	SMRU2120
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12117	39.6	-	CIII01	66	2349	2115	4/21/15	3/5/17	Scaffold	SC	SAMEA1025959	GCA_001344075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/075/GCA_001344075.1_7038_8_47	-	SMRU2255
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	6.19496	57.1	-	CHEE01	7600	6808	6757	4/21/15	6/13/15	Scaffold	SC	SAMEA968096	GCA_001318425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/425/GCA_001318425.1_6505_1_1	-	E09701891
Escherichia coli	562	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.13004	50.6	-	NQDO01	131	5358	4980	8/11/17	8/15/17	Contig	JCVI	SAMN07450657	GCA_002248265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/265/GCA_002248265.1_ASM224826v1	-	ECPUTH04
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72124	52	-	CJXA01	214	4892	4487	3/21/15	2/27/17	Scaffold	SC	SAMEA2059213	GCA_001092625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/625/GCA_001092625.1_9953_5_22	-	A340
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.64641	32.8	-	MUDW01	623	2831	2590	2/13/17	2/22/17	Contig	Univ Mississippi Medical Center	SAMN06209071	GCA_001996565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/565/GCA_001996565.1_ASM199656v1	-	Transconjugant 2B
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.70205	32.7	-	MUDY01	60	2819	2716	2/13/17	2/22/17	Contig	Univ Mississippi Medical Center	SAMN06209073	GCA_001996585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/585/GCA_001996585.1_ASM199658v1	-	Transconjugant 4B
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72537	52	-	CIYF01	56	4897	4502	3/21/15	2/27/17	Scaffold	SC	SAMEA2072819	GCA_001092745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/745/GCA_001092745.1_10349_1_75	-	ERL12375
Escherichia coli	562	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.12567	50.6	-	NQEA01	118	5242	4896	8/11/17	8/15/17	Contig	JCVI	SAMN07450705	GCA_002248405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/405/GCA_002248405.1_ASM224840v1	-	ECPSTH08
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.19939	64.7	-	CHKL01	1404	4802	4752	4/21/15	6/13/15	Scaffold	SC	SAMEA968102	GCA_001318445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/445/GCA_001318445.1_6505_5_10	-	P00601463
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.06659	39.6	-	CGYN01	48	2301	2095	4/21/15	3/5/17	Scaffold	SC	SAMEA1025965	GCA_001344095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/095/GCA_001344095.1_6823_7_23	-	SMRU2015
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.05994	39.5	-	CFEM01	55	2283	2066	3/15/15	3/5/17	Scaffold	SC	SAMEA1025966	GCA_001344115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/115/GCA_001344115.1_6925_5_6	-	SMRU2166
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.0851	64.9	-	CIAA01	1472	4295	4248	4/21/15	6/13/15	Scaffold	SC	SAMEA968160	GCA_001318785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/785/GCA_001318785.1_4948_5_2	-	A00301419
Escherichia coli	562	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.34874	50.7	-	NQCM01	128	5686	5295	8/11/17	8/15/17	Contig	JCVI	SAMN07450676	GCA_002248905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/905/GCA_002248905.1_ASM224890v1	-	ECH+07
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93049	51.8	-	CJMB01	62	5137	4755	3/21/15	2/27/17	Scaffold	SC	SAMEA2160728	GCA_001092785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/785/GCA_001092785.1_10607_1_87	-	2012-010551
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.66603	32.7	-	MUDX01	70	2817	2686	2/13/17	2/22/17	Contig	Univ Mississippi Medical Center	SAMN06209072	GCA_001996605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/605/GCA_001996605.1_ASM199660v1	-	Transconjugant 3B
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.75178	32.8	-	MUEA01	680	2948	2688	2/13/17	2/23/17	Contig	Univ Mississippi Medical Center	SAMN06208980	GCA_001996625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/625/GCA_001996625.1_ASM199662v1	-	DAR6247
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74686	52	-	CJCX01	60	4926	4533	3/21/15	2/27/17	Scaffold	SC	SAMEA2150544	GCA_001092865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/865/GCA_001092865.1_10493_1_84	-	MDUST402
Escherichia coli	562	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.17602	50.4	-	NQDN01	114	5460	5068	8/11/17	8/15/17	Contig	JCVI	SAMN07450658	GCA_002248995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/248/995/GCA_002248995.1_ASM224899v1	-	ECPUTH03
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	3.41631	62.8	-	CHED01	5415	5775	5749	4/21/15	6/12/15	Scaffold	SC	SAMEA968167	GCA_001318805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/805/GCA_001318805.1_6505_5_5	-	N00001761
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.21093	39.7	-	CFDD01	51	2472	2225	3/15/15	3/5/17	Scaffold	SC	SAMEA1025968	GCA_001344135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/135/GCA_001344135.1_6823_4_4	-	SMRU1924
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08363	39.7	-	CFGE01	70	2316	2095	3/15/15	3/5/17	Scaffold	SC	SAMEA1025982	GCA_001344155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/155/GCA_001344155.1_6899_5_17	-	SMRU2057
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	3.99924	64.2	-	CFOH01	1846	4742	4691	3/15/15	6/14/15	Scaffold	SC	SAMEA968183	GCA_001318905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/905/GCA_001318905.1_6505_1_11	-	H09601792
Escherichia coli	562	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.02926	50.7	-	NQDT01	122	5296	4940	8/11/17	8/15/17	Contig	JCVI	SAMN07450712	GCA_002249065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/065/GCA_002249065.1_ASM224906v1	-	ECPUTH09
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73812	52	-	CJDL01	103	4897	4466	3/21/15	2/27/17	Scaffold	SC	SAMEA2159361	GCA_001093245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/245/GCA_001093245.1_10541_2_11	-	MDUST186
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.69616	32.7	-	MUDZ01	59	2811	2713	2/13/17	2/22/17	Contig	Univ Mississippi Medical Center	SAMN06209075	GCA_001996635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/635/GCA_001996635.1_ASM199663v1	-	Transconjugant 6B
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.67274	32.7	-	MTJC01	60	2765	2662	2/13/17	2/22/17	Contig	Univ Mississippi Medical Center	SAMN06209067	GCA_001996665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/665/GCA_001996665.1_ASM199666v1	-	Transconjugant 22A
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72366	52	-	CJGA01	65	4890	4525	3/21/15	2/27/17	Scaffold	SC	SAMEA2150340	GCA_001093265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/265/GCA_001093265.1_10561_2_57	-	np39
Escherichia coli	562	PRJNA381314	381314	Proteobacteria	Gammaproteobacteria	5.0283	50.6	-	NCAC01	200	5293	4866	8/14/17	8/16/17	Contig	Universidad Nacional de Colombia	SAMN06052009	GCA_002250175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/175/GCA_002250175.1_ASM225017v1	-	IBUN9016YEC
Mycobacterium tuberculosis	1773	PRJEB2057	203786	Terrabacteria group	Actinobacteria	4.06409	64.2	-	CFOE01	1588	4812	4761	3/15/15	6/14/15	Scaffold	SC	SAMEA968187	GCA_001318925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/318/925/GCA_001318925.1_6505_1_7	-	G09901357
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.17683	39.6	-	CGYI01	45	2374	2159	4/21/15	3/5/17	Scaffold	SC	SAMEA1025987	GCA_001344175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/175/GCA_001344175.1_6823_6_9	-	SMRU1977
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08833	39.7	-	CGYQ01	66	2327	2113	4/21/15	3/5/17	Scaffold	SC	SAMEA1025989	GCA_001344195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/195/GCA_001344195.1_6899_5_15	-	SMRU2055
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	5.12975	63.1	-	CFUF01	1312	4745	4675	3/15/15	6/13/15	Scaffold	SC	SAMEA1403639	GCA_001322985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/322/985/GCA_001322985.1_7841_6_16	-	1816A
Escherichia coli	562	PRJNA356952	356952	Proteobacteria	Gammaproteobacteria	5.02554	50.4	-	NCAB01	280	5285	4928	8/14/17	8/16/17	Contig	Universidad Nacional de Colombia	SAMN06052010	GCA_002250185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/185/GCA_002250185.1_ASM225018v1	-	IBUN9096YEC
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73581	52	-	CIWS01	57	4909	4526	3/21/15	2/27/17	Scaffold	SC	SAMEA2072903	GCA_001093525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/525/GCA_001093525.1_10349_1_41	-	ERL08758
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.67166	32.7	-	MUEC01	55	2758	2655	2/13/17	2/22/17	Contig	Univ Mississippi Medical Center	SAMN06209048	GCA_001996685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/685/GCA_001996685.1_ASM199668v1	-	Transconjugant 3A
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.70003	32.7	-	MUED01	69	2817	2714	2/13/17	2/22/17	Contig	Univ Mississippi Medical Center	SAMN06209076	GCA_001996715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/715/GCA_001996715.1_ASM199671v1	-	Transconjugant 7B
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.98131	52.1	-	CQGI01	56	5159	4883	3/23/15	2/27/17	Scaffold	SC	SAMEA1568489	GCA_001093545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/545/GCA_001093545.1_8490_2_60	-	CH17
Escherichia coli	562	PRJNA312458	312458	Proteobacteria	Gammaproteobacteria	5.06607	50.654	plasmid pEC-592121_01:NZ_CM008164.1/CM008164.1; plasmid pEC-592121_02:NZ_CM008165.1/CM008165.1; plasmid pEC-592121_03:NZ_CM008166.1/CM008166.1; plasmid pEC-592121_04:NZ_CM008167.1/CM008167.1	LSTM01	109	5358	4852	8/17/17	8/21/17	Contig	Genomic Research Laboratory (GRL)	SAMN04500792	GCA_002257685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/257/685/GCA_002257685.1_ASM225768v1	-	592121
Mycobacterium tuberculosis	1773	PRJEB2777	204473	Terrabacteria group	Actinobacteria	9.04338	62.1	-	CHDS01	6249	7911	7806	4/21/15	6/13/15	Scaffold	SC	SAMEA1523370	GCA_001350795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/795/GCA_001350795.1_8080_8_15	-	200127
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1704	39.6	-	CFDI01	76	2417	2191	3/15/15	3/5/17	Scaffold	SC	SAMEA1025990	GCA_001344215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/215/GCA_001344215.1_6899_4_2	-	SMRU2018
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.05243	39.7	-	CFDF01	63	2264	2033	3/15/15	3/5/17	Scaffold	SC	SAMEA1025996	GCA_001344235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/235/GCA_001344235.1_6823_4_2	-	SMRU1922
Mycobacterium tuberculosis	1773	PRJEB2138	203970	Terrabacteria group	Actinobacteria	5.06397	64.9	-	COIL01	2457	4529	4468	3/23/15	6/14/15	Scaffold	SC	SAMEA1016056	GCA_001376955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/376/955/GCA_001376955.1_6954_7_41	-	0845V
Escherichia coli	562	PRJNA393102	393102	Proteobacteria	Gammaproteobacteria	4.75641	50.6652	plasmid pLH1-mcr1:NZ_CM008267.1/CM008267.1	NKYJ01	136	5141	4520	8/22/17	9/15/17	Contig	IHU Mediteranee Infection	SAMN07316130	GCA_002262865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/262/865/GCA_002262865.1_ASM226286v1	-	LH1
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73094	52.1	-	CIXX01	58	4908	4542	3/21/15	2/27/17	Scaffold	SC	SAMEA2072816	GCA_001093825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/825/GCA_001093825.1_10349_1_66	-	ERL11299
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.66832	32.7	-	MUEB01	72	2749	2647	2/13/17	2/22/17	Contig	Univ Mississippi Medical Center	SAMN06209047	GCA_001996725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/725/GCA_001996725.1_ASM199672v1	-	Transconjugant 2A
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.66707	32.7	-	MUDG01	87	2758	2661	2/13/17	2/22/17	Contig	Univ Mississippi Medical Center	SAMN06209049	GCA_001996765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/765/GCA_001996765.1_ASM199676v1	-	Transconjugant 4A
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.67711	52	-	CIXD01	53	4834	4450	3/21/15	2/27/17	Scaffold	SC	SAMEA2072806	GCA_001093885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/093/885/GCA_001093885.1_10349_1_33	-	ERL082325
Escherichia coli	562	PRJNA393134	393134	Proteobacteria	Gammaproteobacteria	5.19607	50.4905	plasmid pLH57-mcr1:NZ_CM008264.1/CM008264.1	NKYM01	303	5535	5042	8/22/17	9/15/17	Contig	IHU Mediteranee Infection	SAMN07318474	GCA_002263035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/035/GCA_002263035.1_ASM226303v1	-	LH57
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	5.04477	61.9	-	CNFW01	4462	5331	5279	3/23/15	6/13/15	Scaffold	SC	SAMEA1018983	GCA_001392995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/392/995/GCA_001392995.1_6540_3_2	-	Bir 170
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.13305	39.7	-	CHUX01	60	2367	2140	4/21/15	3/5/17	Scaffold	SC	SAMEA1026000	GCA_001344255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/255/GCA_001344255.1_6871_1_1	-	SMRU1777
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.13027	39.6	-	CFDK01	47	2366	2127	3/15/15	3/5/17	Scaffold	SC	SAMEA1026003	GCA_001344275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/275/GCA_001344275.1_6925_5_4	-	SMRU2164
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.74781	64.6	-	CNFT01	3922	5315	5265	3/23/15	6/13/15	Scaffold	SC	SAMEA1019057	GCA_001393835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/835/GCA_001393835.1_6540_3_17	-	Bir 185
Escherichia coli	562	PRJNA393132	393132	Proteobacteria	Gammaproteobacteria	5.0622	50.3921	plasmid pLH30-mcr1:NZ_CM008265.1/CM008265.1	NKYL01	255	5489	4867	8/22/17	9/15/17	Contig	IHU Mediteranee Infection	SAMN07317946	GCA_002263045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/045/GCA_002263045.1_ASM226304v1	-	LH30
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.75277	52	-	CEXS01	55	4915	4554	3/9/15	2/27/17	Scaffold	SC	SAMEA2153135	GCA_001094025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/025/GCA_001094025.1_10562_2_42	-	MDUST273
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.67006	32.7	-	MUDI01	53	2791	2662	2/13/17	2/22/17	Contig	Univ Mississippi Medical Center	SAMN06209054	GCA_001996785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/785/GCA_001996785.1_ASM199678v1	-	Transconjugant 9A
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.66975	32.7	-	MUDJ01	72	2782	2659	2/13/17	2/22/17	Contig	Univ Mississippi Medical Center	SAMN06209055	GCA_001996795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/795/GCA_001996795.1_ASM199679v1	-	Transconjugant 10A
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73263	52	-	CJEU01	59	4883	4545	3/21/15	2/27/17	Scaffold	SC	SAMEA2157583	GCA_001094105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/105/GCA_001094105.1_10541_2_53	-	MDUST345
Escherichia coli	562	PRJNA393060	393060	Proteobacteria	Gammaproteobacteria	4.95529	50.6	-	NKYO01	172	5134	4774	8/22/17	8/24/17	Contig	BUAP-UNAM	SAMN07326068	GCA_002263055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/055/GCA_002263055.1_ASM226305v1	-	SN137
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.60124	65	-	CNGE01	2915	4983	4936	3/23/15	6/14/15	Scaffold	SC	SAMEA1019065	GCA_001393915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/393/915/GCA_001393915.1_6540_3_4	-	Bir 172
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1269	39.3	-	CGYX01	71	2315	2092	4/21/15	3/5/17	Scaffold	SC	SAMEA1026006	GCA_001344295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/295/GCA_001344295.1_6899_5_14	-	SMRU2054
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.10356	39.6	-	CFCB01	57	2306	2052	3/15/15	3/5/17	Scaffold	SC	SAMEA1026008	GCA_001344335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/335/GCA_001344335.1_6840_3_20	-	SMRU1820
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	5.61496	64	-	CNIS01	6169	5878	5825	3/23/15	6/13/15	Scaffold	SC	SAMEA1019077	GCA_001394035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/035/GCA_001394035.1_6540_7_16	-	Bir 277
Escherichia coli	562	PRJNA393123	393123	Proteobacteria	Gammaproteobacteria	5.20978	50.4935	plasmid p1rc4-mcr1:NZ_CM008266.1/CM008266.1	NKYK01	96	5466	5048	8/22/17	9/15/17	Contig	IHU Mediteranee Infection	SAMN07316730	GCA_002263065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/263/065/GCA_002263065.1_ASM226306v1	-	1rc4
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74697	52.1	-	CJAF01	60	4931	4546	3/21/15	2/27/17	Scaffold	SC	SAMEA2147190	GCA_001094245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/245/GCA_001094245.1_10492_1_60	-	MDUST326
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.65569	32.7	-	MUDH01	144	2764	2650	2/13/17	2/22/17	Contig	Univ Mississippi Medical Center	SAMN06209050	GCA_001996805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/805/GCA_001996805.1_ASM199680v1	-	Transconjugant 5A
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.66859	32.7	-	MUDK01	79	2759	2653	2/13/17	2/22/17	Contig	Univ Mississippi Medical Center	SAMN06209056	GCA_001996845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/845/GCA_001996845.1_ASM199684v1	-	Transconjugant 11A
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93212	51.8	-	CJLS01	59	5121	4743	3/21/15	2/27/17	Scaffold	SC	SAMEA2145247	GCA_001094425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/425/GCA_001094425.1_10607_1_60	-	01-2010-000934
Escherichia coli	562	PRJNA395005	395005	Proteobacteria	Gammaproteobacteria	5.10503	50.4	-	NOJW01	407	5412	4863	8/22/17	8/24/17	Contig	"The First Affiliated Hospital, School of Medicine, Zhejiang University"	SAMN07368479	GCA_002264075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/264/075/GCA_002264075.1_ASM226407v1	-	E159
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	5.06075	62.2	-	CNFR01	4671	5429	5385	3/23/15	6/13/15	Scaffold	SC	SAMEA1019088	GCA_001394115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/115/GCA_001394115.1_6540_3_12	-	Bir 180
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09402	39.7	-	CICL01	52	2335	2097	4/21/15	3/5/17	Scaffold	SC	SAMEA1026024	GCA_001344395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/395/GCA_001344395.1_6823_5_21	-	SMRU1965
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.09851	39.7	-	CFFW01	69	2327	2119	3/15/15	3/5/17	Scaffold	SC	SAMEA1026029	GCA_001344415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/415/GCA_001344415.1_6823_3_14	-	SMRU1910
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	5.15626	62	-	CNFQ01	5112	5573	5532	3/23/15	6/14/15	Scaffold	SC	SAMEA1019095	GCA_001394195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/195/GCA_001394195.1_6540_3_10	-	Bir 178
Escherichia coli	562	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	4.9821	50.7	-	NPHQ01	107	5224	4794	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07344983	GCA_002265005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/005/GCA_002265005.1_ASM226500v1	-	E4903
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7246	52	-	CIZS01	56	4899	4521	3/21/15	2/27/17	Scaffold	SC	SAMEA2157301	GCA_001094465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/465/GCA_001094465.1_10492_1_44	-	MDUST249
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.66976	32.7	-	MUDN01	50	2764	2661	2/13/17	2/22/17	Contig	Univ Mississippi Medical Center	SAMN06209059	GCA_001996865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/865/GCA_001996865.1_ASM199686v1	-	Transconjugant 14A
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.66864	32.7	-	MUDM01	63	2759	2658	2/13/17	2/22/17	Contig	Univ Mississippi Medical Center	SAMN06209058	GCA_001996875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/875/GCA_001996875.1_ASM199687v1	-	Transconjugant 13A
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70141	52.1	-	CJTA01	42	4865	4504	3/21/15	2/27/17	Scaffold	SC	SAMEA1903869	GCA_001094525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/525/GCA_001094525.1_9475_6_44	-	1023267
Escherichia coli	562	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.02446	50.7	-	NPHO01	146	5300	4849	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07344985	GCA_002265025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/025/GCA_002265025.1_ASM226502v1	-	E2239
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.85629	63	-	CNFS01	4189	5243	5196	3/23/15	6/13/15	Scaffold	SC	SAMEA1019105	GCA_001394315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/315/GCA_001394315.1_6540_3_11	-	Bir 179
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.13149	39.7	-	CGYL01	74	2357	2146	4/21/15	3/5/17	Scaffold	SC	SAMEA1026037	GCA_001344455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/455/GCA_001344455.1_6840_1_9	-	SMRU1761
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12094	39.8	-	CHHP01	55	2335	2099	4/21/15	3/11/17	Scaffold	SC	SAMEA1026039	GCA_001344475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/475/GCA_001344475.1_6823_7_20	-	SMRU2012
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	5.10772	61.5	-	CNFV01	4437	5263	5209	3/22/15	6/13/15	Scaffold	SC	SAMEA1019112	GCA_001394355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/355/GCA_001394355.1_6540_3_14	-	Bir 182
Escherichia coli	562	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.15832	50.7	-	NPHR01	182	5491	5024	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07344982	GCA_002265035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/035/GCA_002265035.1_ASM226503v1	-	E834
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72113	52	-	CJBC01	58	4872	4511	3/21/15	2/27/17	Scaffold	SC	SAMEA2156688	GCA_001094625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/625/GCA_001094625.1_10492_1_80	-	MDUST404
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.66986	32.7	-	MUDL01	69	2765	2661	2/13/17	2/22/17	Contig	Univ Mississippi Medical Center	SAMN06209057	GCA_001996885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/885/GCA_001996885.1_ASM199688v1	-	Transconjugant 12A
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.67078	32.7	-	MUDO01	53	2755	2658	2/13/17	2/22/17	Contig	Univ Mississippi Medical Center	SAMN06209060	GCA_001996925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/925/GCA_001996925.1_ASM199692v1	-	Transconjugant 15A
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82813	52	-	CJCB01	42	5012	4646	3/21/15	2/27/17	Scaffold	SC	SAMEA2143611	GCA_001094925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/925/GCA_001094925.1_10493_1_5	-	MDUST117
Escherichia coli	562	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.13909	50.5	-	NPHP01	158	5501	4967	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07344984	GCA_002265145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/145/GCA_002265145.1_ASM226514v1	-	E4219
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	5.42574	60.6	-	CNGG01	5652	5777	5723	3/22/15	6/13/15	Scaffold	SC	SAMEA1019167	GCA_001394855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/394/855/GCA_001394855.1_6540_3_24	-	Bir 192
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.05234	39.6	-	CIDC01	51	2252	2013	4/21/15	3/11/17	Scaffold	SC	SAMEA1026046	GCA_001344495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/495/GCA_001344495.1_6983_3_57	-	SMRU2265
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.13218	39.6	-	CGZP01	88	2321	2100	4/21/15	3/11/17	Scaffold	SC	SAMEA1026052	GCA_001344515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/515/GCA_001344515.1_6983_3_58	-	SMRU2266
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	4.6455	64.8	-	CNFU01	3247	5018	4967	3/22/15	6/13/15	Scaffold	SC	SAMEA1019241	GCA_001395435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/395/435/GCA_001395435.1_6540_3_19	-	Bir 187
Escherichia coli	562	PRJNA393804	393804	Proteobacteria	Gammaproteobacteria	5.09512	50.7	-	NPHS01	138	5412	4943	8/22/17	8/24/17	Contig	Zhejiang University	SAMN07344981	GCA_002265155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/155/GCA_002265155.1_ASM226515v1	-	E834
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	5.21746	52.1	-	CQHS01	66	5462	5171	3/23/15	2/27/17	Scaffold	SC	SAMEA1568511	GCA_001095425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/425/GCA_001095425.1_8490_2_87	-	CH44
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.67095	32.7	-	MUDQ01	60	2757	2660	2/13/17	2/22/17	Contig	Univ Mississippi Medical Center	SAMN06209062	GCA_001996945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/945/GCA_001996945.1_ASM199694v1	-	Transconjugant 17A
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.67199	32.7	-	MUDR01	60	2763	2662	2/13/17	2/22/17	Contig	Univ Mississippi Medical Center	SAMN06209063	GCA_001996955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/955/GCA_001996955.1_ASM199695v1	-	Transconjugant 18A
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.85135	52	-	CJGN01	83	5075	4634	3/21/15	2/27/17	Scaffold	SC	SAMEA2152209	GCA_001096105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/105/GCA_001096105.1_10562_2_21	-	MDUST193
Escherichia coli	562	PRJNA395489	395489	Proteobacteria	Gammaproteobacteria	5.23906	51.1	-	NOLW01	207	5484	5143	8/22/17	8/22/17	Contig	National Environmental Engineering Research Institute-CSIR	SAMN07407606	GCA_002265505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/505/GCA_002265505.1_ASM226550v1	-	HPC-781
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	3.70422	65.2	-	CNCN01	2363	4115	4075	3/22/15	6/12/15	Scaffold	SC	SAMEA961615	GCA_001396915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/396/915/GCA_001396915.1_6174_8_4	-	Bir 89
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11851	39.8	-	CVKP01	122	2164	2040	4/2/15	9/2/16	Scaffold	SC	SAMEA1026065	GCA_001344555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/555/GCA_001344555.1_6925_6_3	-	SMRU2187
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.01578	39.8	-	CGYB01	209	2215	1981	4/21/15	3/11/17	Scaffold	SC	SAMEA1026076	GCA_001344595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/595/GCA_001344595.1_6805_7_9	-	SMRU1738
Mycobacterium tuberculosis	1773	PRJEB2221	203976	Terrabacteria group	Actinobacteria	6.03609	65	-	CNDE01	7937	7305	7256	3/23/15	6/14/15	Scaffold	SC	SAMEA961644	GCA_001397415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/397/415/GCA_001397415.1_6221_2_1	-	Bir 16
Escherichia coli	562	PRJNA396689	396689	Proteobacteria	Gammaproteobacteria	5.21413	50.7	-	NQIR01	257	5550	5146	8/23/17	8/25/17	Contig	DTU	SAMN07431096	GCA_002268235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/235/GCA_002268235.1_ASM226823v1	-	EC-117-6-3
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.75335	52	-	CJGW01	53	4935	4555	3/21/15	2/27/17	Scaffold	SC	SAMEA2157676	GCA_001096285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/285/GCA_001096285.1_10562_2_29	-	MDUST238
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.67235	32.7	-	MUDP01	69	2763	2659	2/13/17	2/22/17	Contig	Univ Mississippi Medical Center	SAMN06209061	GCA_001996965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/965/GCA_001996965.1_ASM199696v1	-	Transconjugant 16A
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.67095	32.7	-	MUEE01	63	2757	2657	2/13/17	2/22/17	Contig	Univ Mississippi Medical Center	SAMN06209064	GCA_001997005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/005/GCA_001997005.1_ASM199700v1	-	Transconugant 19A
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72067	52	-	CJEN01	57	4901	4533	3/21/15	2/27/17	Scaffold	SC	SAMEA2161099	GCA_001096345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/345/GCA_001096345.1_10541_2_40	-	MDUST318
Escherichia coli	562	PRJNA396689	396689	Proteobacteria	Gammaproteobacteria	5.05746	50.4	-	NQIQ01	151	5208	4835	8/23/17	8/25/17	Contig	DTU	SAMN07431097	GCA_002268245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/245/GCA_002268245.1_ASM226824v1	-	EC-117-6-4
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.07533	39.7	-	CFCE01	68	2313	2088	3/15/15	3/11/17	Scaffold	SC	SAMEA1026080	GCA_001344615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/615/GCA_001344615.1_6925_4_18	-	SMRU2154
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.04234	39.6	-	CIID01	31	2263	2028	4/21/15	3/11/17	Scaffold	SC	SAMEA1026081	GCA_001344635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/635/GCA_001344635.1_6925_5_9	-	SMRU2169
Escherichia coli	562	PRJNA396689	396689	Proteobacteria	Gammaproteobacteria	4.95957	50.6	-	NQIU01	136	5129	4761	8/23/17	8/25/17	Contig	DTU	SAMN07431093	GCA_002268255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/255/GCA_002268255.1_ASM226825v1	-	EC-117-2-3
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7174	52.1	-	CJKX01	41	4879	4521	3/21/15	2/27/17	Scaffold	SC	SAMEA1930168	GCA_001096385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/385/GCA_001096385.1_10593_2_49	-	E00-5869
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.67048	32.7	-	MUEF01	58	2762	2661	2/13/17	2/22/17	Contig	Univ Mississippi Medical Center	SAMN06209065	GCA_001997025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/025/GCA_001997025.1_ASM199702v1	-	Transconjugant 20A
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.66832	32.7	-	MUEG01	63	2782	2662	2/13/17	2/22/17	Contig	Univ Mississippi Medical Center	SAMN06209051	GCA_001998335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/998/335/GCA_001998335.1_ASM199833v1	-	Transconjugant 6A
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.98454	52.1	-	CQHU01	62	5155	4871	3/23/15	2/27/17	Scaffold	SC	SAMEA1568512	GCA_001096565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/565/GCA_001096565.1_8490_2_48	-	CH5
Escherichia coli	562	PRJNA396689	396689	Proteobacteria	Gammaproteobacteria	4.97311	50.6	-	NQIS01	135	5172	4795	8/23/17	8/25/17	Contig	DTU	SAMN07431095	GCA_002268325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/325/GCA_002268325.1_ASM226832v1	-	EC-117-5-4
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.12292	39.6	-	CGYK01	105	2350	2095	4/21/15	3/11/17	Scaffold	SC	SAMEA1026098	GCA_001344655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/655/GCA_001344655.1_6823_6_21	-	SMRU1989
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.07817	39.7	-	CIHP01	94	2304	2085	4/21/15	3/11/17	Scaffold	SC	SAMEA1026103	GCA_001344675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/675/GCA_001344675.1_6899_7_3	-	SMRU2091
Escherichia coli	562	PRJNA343613	343613	Proteobacteria	Gammaproteobacteria	5.21483	50.5	-	MJIP01	144	5588	5164	8/25/17	8/28/17	Contig	"University of Maryland, School of Medicine"	SAMN05791285	GCA_002269725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/725/GCA_002269725.1_ASM226972v1	28615618	102771
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.85516	52	-	CJAW01	59	5069	4662	3/21/15	2/27/17	Scaffold	SC	SAMEA2159546	GCA_001096665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/665/GCA_001096665.1_10492_1_73	-	MDUST386
Staphylococcus aureus	1280	PRJNA314534	314534	Terrabacteria group	Firmicutes	2.6906	32.8	-	LUFG01	327	2761	2538	4/3/17	4/5/17	Contig	University of Sydney	SAMN04537353	GCA_002077235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/235/GCA_002077235.1_ASM207723v1	27118772	ST425
Staphylococcus aureus	1280	PRJNA369424	369424	Terrabacteria group	Firmicutes	2.9117	32.7	-	MUIS01	75	3070	2950	4/11/17	4/13/17	Contig	National Center for Toxicological Research	SAMN06285790	GCA_002085545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/545/GCA_002085545.1_ASM208554v1	-	MEH7
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.75056	52.1	-	CJSJ01	49	4917	4555	3/21/15	2/27/17	Scaffold	SC	SAMEA1903828	GCA_001096905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/096/905/GCA_001096905.1_9475_6_2	-	1014063
Escherichia coli 102712	1450429	PRJNA343612	343612	Proteobacteria	Gammaproteobacteria	5.19836	50.4	-	MJIO01	139	5603	5172	8/25/17	8/28/17	Contig	"University of Maryland, School of Medicine"	SAMN05791283	GCA_002269735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/735/GCA_002269735.1_ASM226973v1	28615618	102712
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	1.99494	39.8	-	CFGH01	38	2187	1954	3/15/15	3/11/17	Scaffold	SC	SAMEA1026115	GCA_001344695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/695/GCA_001344695.1_6840_3_14	-	SMRU1814
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.13115	39.6	-	CICR01	92	2361	2131	4/21/15	3/11/17	Scaffold	SC	SAMEA1026128	GCA_001344715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/715/GCA_001344715.1_6899_7_2	-	SMRU2090
Escherichia coli 102651	1450428	PRJNA343611	343611	Proteobacteria	Gammaproteobacteria	5.37776	50.6	-	MJIN01	127	5734	5316	8/25/17	8/28/17	Contig	"University of Maryland, School of Medicine"	SAMN05791265	GCA_002269745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/269/745/GCA_002269745.1_ASM226974v1	28615618	102651
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.97837	52.1	-	CQHQ01	42	5150	4880	3/23/15	2/27/17	Scaffold	SC	SAMEA1568477	GCA_001097045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/045/GCA_001097045.1_8490_2_94	-	CH51
Staphylococcus aureus	1280	PRJNA369421	369421	Terrabacteria group	Firmicutes	2.91497	32.7	-	MUIR01	66	3072	2953	4/11/17	4/13/17	Contig	National Center for Toxicological Research	SAMN06285665	GCA_002085555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/085/555/GCA_002085555.1_ASM208555v1	-	MEH1
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.79409	32.6	-	NAIB01	175	2915	2745	4/18/17	4/21/17	Contig	University of Sydney	SAMN06546698	GCA_002096985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/096/985/GCA_002096985.1_ASM209698v1	-	698
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.614	52.1	-	CJHO01	60	4770	4411	3/21/15	2/27/17	Scaffold	SC	SAMEA2142478	GCA_001097065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/065/GCA_001097065.1_10562_2_52	-	MDUST347
Escherichia coli	562	PRJNA389247	389247	Proteobacteria	Gammaproteobacteria	4.84251	50.9	-	NIFW01	2	5015	4649	8/25/17	8/28/17	Contig	The Hong Kong Polytechnic University	SAMN07193009	GCA_002270225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/270/225/GCA_002270225.1_ASM227022v1	-	SZH3951
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.07898	39.7	-	CGYY01	61	2300	2087	4/21/15	3/11/17	Scaffold	SC	SAMEA1026144	GCA_001344755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/755/GCA_001344755.1_6925_5_23	-	SMRU2183
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.05093	39.7	-	CHUW01	55	2264	2038	4/21/15	3/11/17	Scaffold	SC	SAMEA1026155	GCA_001344775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/775/GCA_001344775.1_6840_3_16	-	SMRU1816
Escherichia coli	562	PRJNA389489	389489	Proteobacteria	Gammaproteobacteria	5.05051	50.6	-	NJIR01	2	5184	4865	8/29/17	8/30/17	Contig	Polyu	SAMN07251586	GCA_002277105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/105/GCA_002277105.1_ASM227710v1	-	E3
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.0301	51.8	-	CILF01	71	5276	4807	3/21/15	2/27/17	Scaffold	SC	SAMEA2158735	GCA_001097285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/285/GCA_001097285.1_10492_1_79	-	MDUST403
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.76	32.9	-	NAIC01	422	2864	2636	4/18/17	4/21/17	Contig	University of Sydney	SAMN06546697	GCA_002097015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/015/GCA_002097015.1_ASM209701v1	-	516
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.78689	32.7	-	NAID01	240	2932	2757	4/18/17	4/21/17	Contig	University of Sydney	SAMN06546696	GCA_002097025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/025/GCA_002097025.1_ASM209702v1	-	103
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.75472	52	-	CIYD01	58	4936	4557	3/21/15	2/27/17	Scaffold	SC	SAMEA2072932	GCA_001097585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/585/GCA_001097585.1_10349_1_78	-	ERL12959
Escherichia coli	562	PRJNA343664	343664	Proteobacteria	Gammaproteobacteria	4.64532	50.7	-	MVOZ01	194	4854	4520	8/31/17	9/2/17	Contig	Universidad El Bosque	SAMN06020347	GCA_002283335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/335/GCA_002283335.1_ASM228333v1	-	Tc-S1257
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.24447	39.6	-	CFEX01	49	2485	2234	3/15/15	3/11/17	Scaffold	SC	SAMEA1026170	GCA_001344815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/815/GCA_001344815.1_7038_8_28	-	SMRU2236
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.08445	39.5	-	CGZB01	55	2283	2047	4/21/15	3/11/17	Scaffold	SC	SAMEA1026172	GCA_001344835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/835/GCA_001344835.1_6925_6_6	-	SMRU2190
Escherichia coli	562	PRJNA343664	343664	Proteobacteria	Gammaproteobacteria	4.63271	50.8	-	MVPC01	258	4832	4510	8/31/17	9/2/17	Contig	Universidad El Bosque	SAMN06020344	GCA_002283345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/345/GCA_002283345.1_ASM228334v1	-	Tc-RA372.16
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74266	52.1	-	CJMV01	48	4917	4552	3/21/15	2/27/17	Scaffold	SC	SAMEA2161463	GCA_001097625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/625/GCA_001097625.1_10607_2_38	-	BKQ4D9
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.78404	32.9	-	NAIF01	864	2967	2714	4/18/17	4/21/17	Contig	University of Sydney	SAMN06546694	GCA_002097045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/045/GCA_002097045.1_ASM209704v1	-	822
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.86652	32.7	-	NAIG01	160	3023	2891	4/18/17	4/21/17	Contig	University of Sydney	SAMN06546693	GCA_002097075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/075/GCA_002097075.1_ASM209707v1	-	734
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72584	52	-	CJOR01	42	4882	4526	3/21/15	2/27/17	Scaffold	SC	SAMEA1572827	GCA_001098225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/225/GCA_001098225.1_8447_8_15	-	MDUST87
Escherichia coli	562	PRJNA343664	343664	Proteobacteria	Gammaproteobacteria	4.97414	50.6	-	MVPI01	196	5282	4882	8/31/17	9/2/17	Contig	Universidad El Bosque	SAMN05792034	GCA_002283355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/355/GCA_002283355.1_ASM228335v1	-	GMR-RA-432.16
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.13253	39.9	-	CFEO01	164	2386	2045	3/15/15	3/14/17	Scaffold	SC	SAMEA1026179	GCA_001344875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/875/GCA_001344875.1_6925_3_5	-	SMRU2117
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.11857	39.5	-	CFGC01	47	2334	2103	3/15/15	3/11/17	Scaffold	SC	SAMEA1026195	GCA_001344935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/935/GCA_001344935.1_6925_5_20	-	SMRU2180
Escherichia coli	562	PRJNA343664	343664	Proteobacteria	Gammaproteobacteria	4.65155	50.7	-	MVPE01	100	4852	4539	8/31/17	9/2/17	Contig	Universidad El Bosque	SAMN06011410	GCA_002283415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/415/GCA_002283415.1_ASM228341v1	-	Tc-RA229.16
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72377	52	-	CJEV01	56	4877	4518	3/21/15	2/27/17	Scaffold	SC	SAMEA2151550	GCA_001098485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/485/GCA_001098485.1_10541_2_7	-	MDUST164
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.85295	32.7	-	NAIH01	308	3014	2854	4/18/17	4/21/17	Contig	University of Sydney	SAMN06546692	GCA_002097115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/115/GCA_002097115.1_ASM209711v1	-	723
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.91976	32.7	-	NAIJ01	267	3109	2950	4/18/17	4/21/17	Contig	University of Sydney	SAMN06546690	GCA_002097125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/125/GCA_002097125.1_ASM209712v1	-	58
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.76751	52	-	CJBN01	51	4925	4568	3/21/15	2/27/17	Scaffold	SC	SAMEA2160172	GCA_001098645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/645/GCA_001098645.1_10493_1_3	-	MDUST113
Escherichia coli	562	PRJNA343664	343664	Proteobacteria	Gammaproteobacteria	4.77018	50.5	-	MVPA01	106	4973	4663	8/31/17	9/2/17	Contig	Universidad El Bosque	SAMN06020346	GCA_002283425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/425/GCA_002283425.1_ASM228342v1	-	Tc-S1454
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.14258	39.6	-	CHHO01	73	2379	2146	4/21/15	3/11/17	Scaffold	SC	SAMEA1026201	GCA_001344955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/955/GCA_001344955.1_6823_6_7	-	SMRU1975
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.0642	39.8	-	CGZE01	49	2282	2052	4/21/15	3/11/17	Scaffold	SC	SAMEA1026231	GCA_001345015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/015/GCA_001345015.1_6925_6_11	-	SMRU2195
Escherichia coli	562	PRJNA343664	343664	Proteobacteria	Gammaproteobacteria	4.56642	50.8	-	MVOY01	478	4748	4404	8/31/17	9/2/17	Contig	Universidad El Bosque	SAMN06020348	GCA_002283445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/445/GCA_002283445.1_ASM228344v1	-	Tc-RB634
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81498	52.1	-	CJKQ01	47	4993	4628	3/21/15	2/27/17	Scaffold	SC	SAMEA1930212	GCA_001098665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/665/GCA_001098665.1_10593_2_38	-	06-467
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.88213	32.8	-	NAIK01	407	3054	2893	4/18/17	4/21/17	Contig	University of Sydney	SAMN06546689	GCA_002097135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/135/GCA_002097135.1_ASM209713v1	-	673
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.84884	32.7	-	NAIL01	443	3034	2836	4/18/17	4/21/17	Contig	University of Sydney	SAMN06546688	GCA_002097165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/165/GCA_002097165.1_ASM209716v1	-	580
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74723	52.1	-	CJTY01	49	4917	4542	3/21/15	2/27/17	Scaffold	SC	SAMEA1903903	GCA_001098945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/945/GCA_001098945.1_9475_6_77	-	1028963
Escherichia coli	562	PRJNA343664	343664	Proteobacteria	Gammaproteobacteria	5.16038	50.1	-	MVPG01	224	5398	4958	8/31/17	9/2/17	Contig	Universidad El Bosque	SAMN05806786	GCA_002283465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/465/GCA_002283465.1_ASM228346v1	-	6770
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.02313	39.7	-	CFCA01	53	2218	2005	3/15/15	3/11/17	Scaffold	SC	SAMEA1026245	GCA_001345035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/035/GCA_001345035.1_6823_3_9	-	SMRU1905
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.17676	39.9	-	CHVI01	69	2386	2162	4/21/15	3/11/17	Scaffold	SC	SAMEA1026262	GCA_001345055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/055/GCA_001345055.1_6899_7_19	-	SMRU2107
Escherichia coli	562	PRJNA343664	343664	Proteobacteria	Gammaproteobacteria	4.8277	50.7	-	MVPN01	241	5064	4680	8/31/17	9/2/17	Contig	Universidad El Bosque	SAMN05792029	GCA_002283505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/505/GCA_002283505.1_ASM228350v1	-	GMR-RA-229.16
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74913	52.1	-	CJTP01	46	4925	4554	3/21/15	2/27/17	Scaffold	SC	SAMEA1903888	GCA_001099045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/045/GCA_001099045.1_9475_6_65	-	1012727
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.74842	32.8	-	NAIM01	535	2854	2639	4/18/17	4/21/17	Contig	University of Sydney	SAMN06546687	GCA_002097195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/195/GCA_002097195.1_ASM209719v1	-	616
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.7827	32.7	-	NAIO01	270	2887	2688	4/18/17	4/21/17	Contig	University of Sydney	SAMN06546685	GCA_002097205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/205/GCA_002097205.1_ASM209720v1	-	622
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70892	52.1	-	CJXG01	44	4867	4516	3/21/15	2/27/17	Scaffold	SC	SAMEA2056362	GCA_001099125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/125/GCA_001099125.1_9953_5_30	-	A352
Escherichia coli	562	PRJNA343664	343664	Proteobacteria	Gammaproteobacteria	4.90338	50.5	-	MVOX01	235	5127	4774	8/31/17	9/2/17	Contig	Universidad El Bosque	SAMN06020349	GCA_002283595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/595/GCA_002283595.1_ASM228359v1	-	Tc-RA453.16
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.11339	39.5	-	CIIM01	68	2332	2113	4/21/15	3/11/17	Scaffold	SC	SAMEA1028626	GCA_001345375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/375/GCA_001345375.1_6972_3_3	-	SMRU2571
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05984	39.6	-	CFHC01	50	2245	1995	3/15/15	3/11/17	Scaffold	SC	SAMEA1028632	GCA_001345415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/415/GCA_001345415.1_7011_5_10	-	SMRU2794
Escherichia coli	562	PRJNA343664	343664	Proteobacteria	Gammaproteobacteria	4.77948	50.5	-	MVPB01	110	4991	4675	8/31/17	9/2/17	Contig	Universidad El Bosque	SAMN06020345	GCA_002283615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/615/GCA_002283615.1_ASM228361v1	-	Tc-S356
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.85201	52.1	-	CJKE01	54	5071	4665	3/21/15	2/27/17	Scaffold	SC	SAMEA1930209	GCA_001099145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/145/GCA_001099145.1_10593_2_14	-	May-83
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.68699	32.9	-	NAIP01	820	2787	2492	4/18/17	4/21/17	Contig	University of Sydney	SAMN06546684	GCA_002097225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/225/GCA_002097225.1_ASM209722v1	-	619
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.73323	32.9	-	NAIS01	1213	2883	2516	4/18/17	4/21/17	Contig	University of Sydney	SAMN06546681	GCA_002097245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/245/GCA_002097245.1_ASM209724v1	-	34
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72908	52	-	CJPT01	48	4894	4533	3/21/15	2/27/17	Scaffold	SC	SAMEA1572801	GCA_001099205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/205/GCA_001099205.1_8490_5_30	-	MDUST30
Escherichia coli	562	PRJNA343664	343664	Proteobacteria	Gammaproteobacteria	4.65647	50.7	-	MVPD01	144	4853	4539	8/31/17	9/2/17	Contig	Universidad El Bosque	SAMN06020343	GCA_002283625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/625/GCA_002283625.1_ASM228362v1	-	Tc-RA402.16
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.09835	39.7	-	CHVQ01	52	2339	2094	4/21/15	3/5/17	Scaffold	SC	SAMEA1028678	GCA_001345495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/495/GCA_001345495.1_7004_5_22	-	SMRU2878
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.19769	39.5	-	CHVS01	99	2429	2185	4/21/15	3/5/17	Scaffold	SC	SAMEA1028702	GCA_001345555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/555/GCA_001345555.1_6983_6_42	-	SMRU2346
Escherichia coli	562	PRJNA343664	343664	Proteobacteria	Gammaproteobacteria	4.67928	50.7	-	MVPF01	118	4877	4573	8/31/17	9/2/17	Contig	Universidad El Bosque	SAMN06011409	GCA_002283645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/645/GCA_002283645.1_ASM228364v1	-	Tc-RA346.16
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.66536	52.1	-	CJJR01	46	4825	4467	3/21/15	2/27/17	Scaffold	SC	SAMEA1930176	GCA_001099305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/305/GCA_001099305.1_10592_2_57	-	E01-1747
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.73355	32.7	-	NAIW01	223	2782	2631	4/18/17	4/21/17	Contig	University of Sydney	SAMN06546676	GCA_002097265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/265/GCA_002097265.1_ASM209726v1	-	Q13/1/305
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.76205	32.8	-	NAIR01	677	2865	2630	4/18/17	4/21/17	Contig	University of Sydney	SAMN06546682	GCA_002097285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/285/GCA_002097285.1_ASM209728v1	-	38
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73573	52	-	CJCM01	58	4886	4533	3/21/15	2/27/17	Scaffold	SC	SAMEA2153717	GCA_001099365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/365/GCA_001099365.1_10493_1_72	-	MDUST331
Escherichia coli	562	PRJNA343664	343664	Proteobacteria	Gammaproteobacteria	4.68712	50.6	-	MVPJ01	168	4909	4535	8/31/17	9/2/17	Contig	Universidad El Bosque	SAMN05792033	GCA_002283675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/675/GCA_002283675.1_ASM228367v1	-	GMR-RA-402.16
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.17011	39.5	-	CIDF01	78	2411	2172	4/21/15	3/5/17	Scaffold	SC	SAMEA1028713	GCA_001345595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/595/GCA_001345595.1_7011_5_15	-	SMRU2799
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.16502	39.5	-	CFHM01	79	2416	2177	3/15/15	3/5/17	Scaffold	SC	SAMEA1028722	GCA_001345615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/615/GCA_001345615.1_6938_8_3	-	SMRU2715
Escherichia coli	562	PRJNA343664	343664	Proteobacteria	Gammaproteobacteria	5.01227	50.6	-	MVPK01	207	5338	4938	8/31/17	9/2/17	Contig	Universidad El Bosque	SAMN05792032	GCA_002283695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/695/GCA_002283695.1_ASM228369v1	-	GMR-RA-381.16
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3164	204701	Proteobacteria	Gammaproteobacteria	4.93243	51.8	-	CJRL01	51	5124	4751	3/21/15	2/27/17	Scaffold	SC	SAMEA1572045	GCA_001099405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/405/GCA_001099405.1_8525_3_56	-	Ke477
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.73359	32.7	-	NAIE01	435	2899	2668	4/18/17	4/21/17	Contig	University of Sydney	SAMN06546695	GCA_002097435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/435/GCA_002097435.1_ASM209743v1	-	728
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.91301	32.7	-	NAII01	162	3104	2967	4/18/17	4/26/17	Contig	University of Sydney	SAMN06546691	GCA_002097445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/445/GCA_002097445.1_ASM209744v1	-	612
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.63832	52.1	-	CJGY01	62	4796	4427	3/21/15	2/27/17	Scaffold	SC	SAMEA2146471	GCA_001099465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/465/GCA_001099465.1_10562_2_31	-	MDUST245
Escherichia coli	562	PRJNA343664	343664	Proteobacteria	Gammaproteobacteria	5.02663	50.7	-	MVPL01	311	5265	4822	8/31/17	9/2/17	Contig	Universidad El Bosque	SAMN05792031	GCA_002283715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/715/GCA_002283715.1_ASM228371v1	-	GMR-RA-372.16
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.0137	39.7	-	CHVY01	138	2193	1920	4/21/15	3/6/17	Scaffold	SC	SAMEA1028742	GCA_001345675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/675/GCA_001345675.1_7011_3_13	-	SMRU2749
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05674	39.6	-	CHIB01	63	2235	1989	4/21/15	3/5/17	Scaffold	SC	SAMEA1028763	GCA_001345695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/695/GCA_001345695.1_6983_5_16	-	SMRU2320
Escherichia coli	562	PRJNA343664	343664	Proteobacteria	Gammaproteobacteria	4.95982	50.7	-	MVPM01	328	5212	4745	8/31/17	9/2/17	Contig	Universidad El Bosque	SAMN05792030	GCA_002283725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/725/GCA_002283725.1_ASM228372v1	-	GMR-RA-346.16
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73162	52.1	-	CIXP01	59	4906	4534	3/21/15	2/27/17	Scaffold	SC	SAMEA2072654	GCA_001099585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/585/GCA_001099585.1_10349_1_53	-	ERL101621
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.69515	32.9	-	NAIN01	1059	2849	2517	4/18/17	4/21/17	Contig	University of Sydney	SAMN06546686	GCA_002097495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/495/GCA_002097495.1_ASM209749v1	-	809
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.73174	32.8	-	NAIQ01	641	2794	2565	4/18/17	4/21/17	Contig	University of Sydney	SAMN06546683	GCA_002097505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/505/GCA_002097505.1_ASM209750v1	-	428
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.95172	51.9	-	CJNZ01	128	5136	4737	3/21/15	2/27/17	Scaffold	SC	SAMEA1406357	GCA_001099645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/645/GCA_001099645.1_7468_7_59	-	IB5345
Escherichia coli	562	PRJNA343664	343664	Proteobacteria	Gammaproteobacteria	5.42943	50.3	-	MVPO01	168	5664	5294	8/31/17	9/2/17	Contig	Universidad El Bosque	SAMN05792028	GCA_002283775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/775/GCA_002283775.1_ASM228377v1	-	GMR-RB-634
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10725	39.6	-	CICZ01	85	2334	2108	4/21/15	3/5/17	Scaffold	SC	SAMEA1028790	GCA_001345775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/775/GCA_001345775.1_6983_8_79	-	SMRU2383
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.09234	39.5	-	CHVP01	63	2291	2051	4/21/15	3/5/17	Scaffold	SC	SAMEA1028796	GCA_001345795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/795/GCA_001345795.1_6983_8_78	-	SMRU2382
Escherichia coli	562	PRJNA389301	389301	Proteobacteria	Gammaproteobacteria	5.10822	50.6	-	NJAA01	164	5471	4783	9/1/17	9/4/17	Contig	USDA-ARS	SAMN07198921	GCA_002284655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/655/GCA_002284655.1_ASM228465v1	-	382.h
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74635	52.1	-	CJTS01	46	4912	4538	3/21/15	2/27/17	Scaffold	SC	SAMEA1903907	GCA_001099705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/705/GCA_001099705.1_9475_6_78	-	1026460
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.78283	32.7	-	NAIT01	220	2872	2675	4/18/17	4/21/17	Contig	University of Sydney	SAMN06546680	GCA_002097515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/515/GCA_002097515.1_ASM209751v1	-	773
Staphylococcus aureus	1280	PRJNA380878	380878	Terrabacteria group	Firmicutes	2.76242	32.8	-	NBNF01	145	2848	2690	4/18/17	4/21/17	Contig	"Technical University of Denmark, National Veterinary Institute"	SAMN06650965	GCA_002099175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/099/175/GCA_002099175.1_ASM209917v1	-	Sa52
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.77044	52.3	-	CJNN01	408	4982	4509	3/21/15	2/27/17	Scaffold	SC	SAMEA2146843	GCA_001099785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/785/GCA_001099785.1_10608_2_49	-	01-2010-005164
Escherichia coli	562	PRJNA389301	389301	Proteobacteria	Gammaproteobacteria	4.96583	50.8	-	NIZY01	91	5204	4813	9/1/17	9/4/17	Contig	USDA-ARS	SAMN07198923	GCA_002284665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/665/GCA_002284665.1_ASM228466v1	-	131i
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12629	39.3	-	CGZU01	51	2326	2102	4/21/15	3/5/17	Scaffold	SC	SAMEA1028812	GCA_001345815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/815/GCA_001345815.1_7004_5_14	-	SMRU2870
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.1463	39.6	-	CFHP01	75	2384	2147	3/15/15	3/5/17	Scaffold	SC	SAMEA1028816	GCA_001345855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/855/GCA_001345855.1_7011_5_16	-	SMRU2800
Escherichia coli	562	PRJNA389301	389301	Proteobacteria	Gammaproteobacteria	4.92129	50.8	-	NIZZ01	78	5133	4761	9/1/17	9/4/17	Contig	USDA-ARS	SAMN07198922	GCA_002284675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/675/GCA_002284675.1_ASM228467v1	-	104
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.86794	51.9	-	CEXQ01	69	5066	4689	3/11/15	2/27/17	Scaffold	SC	SAMEA1972149	GCA_001100005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/005/GCA_001100005.1_10561_2_60	-	3143/3
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.77967	32.8	-	NAQM01	216	2857	2672	4/21/17	4/24/17	Contig	University of Sydney	SAMN06546678	GCA_002104815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/815/GCA_002104815.1_ASM210481v1	-	V13/2/439
Staphylococcus aureus	1280	PRJNA272365	272365	Terrabacteria group	Firmicutes	2.74321	32.7	-	JXMJ01	105	2807	2669	4/21/17	4/24/17	Contig	"Nanshan Hospital of Guangdong Medical College, Shenzhen, China;"	SAMN03280993	GCA_002105325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/325/GCA_002105325.1_ASM210532v1	-	MS4_LZD100
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72155	52	-	CIWT01	57	4886	4506	3/21/15	2/27/17	Scaffold	SC	SAMEA2072648	GCA_001100105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/105/GCA_001100105.1_10349_1_37	-	ERL082759
Escherichia coli	562	PRJNA389301	389301	Proteobacteria	Gammaproteobacteria	5.30554	50.8	-	NIZX01	130	5643	5174	9/1/17	9/4/17	Contig	USDA-ARS	SAMN07198924	GCA_002284685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/685/GCA_002284685.1_ASM228468v1	-	141
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.09705	39.5	-	CGZN01	51	2314	2071	4/21/15	3/5/17	Scaffold	SC	SAMEA1028820	GCA_001345875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/875/GCA_001345875.1_6972_4_22	-	SMRU2614
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.09901	39.5	-	CFDN01	41	2303	2064	3/15/15	3/5/17	Scaffold	SC	SAMEA1028821	GCA_001345895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/895/GCA_001345895.1_6972_3_10	-	SMRU2578
Escherichia coli	562	PRJNA389301	389301	Proteobacteria	Gammaproteobacteria	5.10767	50.5	-	NJAC01	161	5478	4787	9/1/17	9/4/17	Contig	USDA-ARS	SAMN07198919	GCA_002284735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/735/GCA_002284735.1_ASM228473v1	-	299.h
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.736	52	-	CIZP01	60	4892	4536	3/21/15	2/27/17	Scaffold	SC	SAMEA2147665	GCA_001100425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/425/GCA_001100425.1_10492_1_35	-	MDUST229
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.86046	32.7	-	NDSB01	117	2964	2840	5/10/17	5/22/17	Contig	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698085	GCA_002124025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/025/GCA_002124025.1_ASM212402v1	28446577	CFSA114
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.79421	32.8	-	NDSS01	132	2877	2752	5/10/17	5/22/17	Contig	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698068	GCA_002125155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/155/GCA_002125155.1_ASM212515v1	28446577	CFSA095
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7468	52.1	-	CJHJ01	61	4909	4539	3/21/15	2/27/17	Scaffold	SC	SAMEA2154938	GCA_001101305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/305/GCA_001101305.1_10562_2_48	-	MDUST324
Escherichia coli	562	PRJNA389301	389301	Proteobacteria	Gammaproteobacteria	4.9201	50.8	-	NJAB01	79	5131	4756	9/1/17	9/4/17	Contig	USDA-ARS	SAMN07198920	GCA_002284745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/745/GCA_002284745.1_ASM228474v1	-	322i.h
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.2163	39.5	-	CFEN01	76	2449	2225	3/15/15	3/5/17	Scaffold	SC	SAMEA1028824	GCA_001345915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/915/GCA_001345915.1_6925_7_23	-	SMRU2519
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12011	39.7	-	CHVH01	45	2278	2021	4/21/15	3/15/17	Scaffold	SC	SAMEA1028831	GCA_001345935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/935/GCA_001345935.1_6925_7_2	-	SMRU2498
Escherichia coli	562	PRJNA389301	389301	Proteobacteria	Gammaproteobacteria	4.74864	50.9	-	NJAD01	127	5041	4527	9/1/17	9/4/17	Contig	USDA-ARS	SAMN07198918	GCA_002284775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/775/GCA_002284775.1_ASM228477v1	-	204ii.h
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.75325	52	-	CIZY01	57	4933	4578	3/21/15	2/27/17	Scaffold	SC	SAMEA2153406	GCA_001101445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/445/GCA_001101445.1_10492_1_46	-	MDUST253
Staphylococcus aureus	1280	PRJNA357982	357982	Terrabacteria group	Firmicutes	2.89325	32.8	-	MSRD01	161	3030	2869	5/11/17	5/23/17	Contig	Hiroshima University	SAMN06163085	GCA_002131825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/825/GCA_002131825.1_ASM213182v1	-	HU09-1102016
Staphylococcus aureus	1280	PRJNA357982	357982	Terrabacteria group	Firmicutes	2.93425	32.8	-	MSRE01	119	3072	2925	5/11/17	5/23/17	Contig	Hiroshima University	SAMN06163086	GCA_002131855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/131/855/GCA_002131855.1_ASM213185v1	-	HU09-1102013
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73308	52	-	CJHP01	60	4886	4521	3/21/15	2/27/17	Scaffold	SC	SAMEA2157645	GCA_001101505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/505/GCA_001101505.1_10562_2_54	-	MDUST353
Escherichia coli	562	PRJNA389301	389301	Proteobacteria	Gammaproteobacteria	4.86488	50.6	-	NJAE01	179	5154	4615	9/1/17	9/4/17	Contig	USDA-ARS	SAMN07198917	GCA_002284785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/785/GCA_002284785.1_ASM228478v1	-	129.h
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.04936	39.7	-	CIIU01	57	2252	2037	4/21/15	3/5/17	Scaffold	SC	SAMEA1028835	GCA_001345955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/955/GCA_001345955.1_6972_4_23	-	SMRU2615
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.16029	39.6	-	CGZJ01	42	2412	2161	4/21/15	3/11/17	Scaffold	SC	SAMEA1028853	GCA_001346055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/055/GCA_001346055.1_6949_3_14	-	SMRU2462
Escherichia coli	562	PRJNA389301	389301	Proteobacteria	Gammaproteobacteria	5.30051	50.8	-	NJAF01	134	5646	5182	9/1/17	9/4/17	Contig	USDA-ARS	SAMN07198916	GCA_002284815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/284/815/GCA_002284815.1_ASM228481v1	-	38.ii.h
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.8287	52	-	CJHW01	54	5013	4643	3/21/15	2/27/17	Scaffold	SC	SAMEA2144526	GCA_001101625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/625/GCA_001101625.1_10562_2_66	-	MDUST376
Staphylococcus aureus subsp. aureus	46170	PRJNA381376	381376	Terrabacteria group	Firmicutes	2.81161	33	-	NBSJ01	167	2867	2677	5/12/17	5/23/17	Contig	Christian Medical College	SAMN06675390	GCA_002135085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/085/GCA_002135085.1_ASM213508v1	-	VB3985
Staphylococcus aureus subsp. aureus	46170	PRJNA381375	381375	Terrabacteria group	Firmicutes	2.79642	32.7	-	NBSI01	78	2879	2646	5/12/17	5/23/17	Contig	Christian Medical College	SAMN06675389	GCA_002135105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/135/105/GCA_002135105.1_ASM213510v1	-	VB4283
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72213	52	-	CIXZ01	56	4881	4501	3/21/15	2/27/17	Scaffold	SC	SAMEA2072662	GCA_001101805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/805/GCA_001101805.1_10349_1_67	-	ERL113095
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.94108	50.6	-	NTDK01	40	4997	4732	9/11/17	9/13/17	Contig	US Food and Drug Administration	SAMN04942842	GCA_002289465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/465/GCA_002289465.1_ASM228946v1	-	KCJK507
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.11304	39.6	-	CGZF01	58	2354	2126	4/21/15	3/11/17	Scaffold	SC	SAMEA1028866	GCA_001346095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/095/GCA_001346095.1_6938_5_4	-	SMRU2644
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.11445	39.5	-	CIIB01	50	2339	2119	4/21/15	3/11/17	Scaffold	SC	SAMEA1028868	GCA_001346115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/115/GCA_001346115.1_6972_3_7	-	SMRU2575
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.93906	50.6	-	NTDL01	46	4995	4727	9/11/17	9/13/17	Contig	US Food and Drug Administration	SAMN05163867	GCA_002289475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/475/GCA_002289475.1_ASM228947v1	-	KCJK511
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72479	52	-	CJQE01	36	4882	4523	3/21/15	2/27/17	Scaffold	SC	SAMEA1572791	GCA_001101825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/101/825/GCA_001101825.1_8490_6_39	-	MDUST39
Staphylococcus aureus	1280	PRJNA386030	386030	Terrabacteria group	Firmicutes	2.84811	32.8	-	NGFK01	3	2950	2792	5/16/17	5/24/17	Contig	Broad Institute	SAMN05504819	GCA_002140165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/140/165/GCA_002140165.1_ASM214016v1	-	RB219
Staphylococcus aureus	1280	PRJNA386030	386030	Terrabacteria group	Firmicutes	2.78387	32.8	-	NGFJ01	9	2857	2667	5/16/17	5/24/17	Contig	Broad Institute	SAMN05504818	GCA_002141045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/141/045/GCA_002141045.1_ASM214104v1	-	RB210
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72195	52	-	CJFV01	55	4897	4515	3/21/15	2/27/17	Scaffold	SC	SAMEA2144099	GCA_001102385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/385/GCA_001102385.1_10561_2_51	-	np89
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.0835	51	-	NSEF01	681	5426	4806	9/12/17	9/14/17	Contig	US Food and Drug Administration	SAMN04158431	GCA_002290835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/835/GCA_002290835.1_ASM229083v1	-	JEONG-5120
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10789	39.5	-	CFCG01	71	2327	2091	3/15/15	3/11/17	Scaffold	SC	SAMEA1028878	GCA_001346135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/135/GCA_001346135.1_6949_1_3	-	SMRU2403
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12171	39.6	-	CFEU01	67	2282	1996	3/15/15	3/11/17	Scaffold	SC	SAMEA1028880	GCA_001346155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/155/GCA_001346155.1_7011_6_17	-	SMRU2825
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.11994	51	-	NSEG01	591	5452	4865	9/12/17	9/14/17	Contig	US Food and Drug Administration	SAMN04158432	GCA_002290865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/865/GCA_002290865.1_ASM229086v1	-	JEONG-5232
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82419	52	-	CJIG01	55	5012	4645	3/21/15	2/27/17	Scaffold	SC	SAMEA1973506	GCA_001102465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/465/GCA_001102465.1_10562_2_84	-	MDUST416
Staphylococcus aureus	1280	PRJNA269675	269675	Terrabacteria group	Firmicutes	2.70079	32.6671	plasmid pMW2:NZ_CM007997.1/CM007997.1	NIDD01	48	2780	2553	6/9/17	6/19/17	Contig	SRCAMB	SAMN07167827	GCA_002188425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/425/GCA_002188425.1_ASM218842v1	-	SCPM-O-B-7906
Staphylococcus aureus	1280	PRJNA269675	269675	Terrabacteria group	Firmicutes	2.70443	32.6672	plasmid pMW2:NZ_CM007996.1/CM007996.1	NIDB01	40	2788	2609	6/9/17	6/19/17	Contig	SRCAMB	SAMN07167825	GCA_002188455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/188/455/GCA_002188455.1_ASM218845v1	-	SCPM-O-B-7905
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70512	52.1	-	CJQT01	44	4858	4503	3/21/15	2/27/17	Scaffold	SC	SAMEA1572834	GCA_001102485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/485/GCA_001102485.1_8490_6_66	-	MDUST66
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.13443	50.9	-	NSEH01	576	5456	4872	9/12/17	9/14/17	Contig	US Food and Drug Administration	SAMN04158433	GCA_002290875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/875/GCA_002290875.1_ASM229087v1	-	JEONG-5250
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.18477	39.5	-	CICV01	115	2401	2165	4/21/15	3/11/17	Scaffold	SC	SAMEA1028888	GCA_001346175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/175/GCA_001346175.1_6938_5_19	-	SMRU2659
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.1949	39.6	-	CFDU01	61	2380	2132	3/15/15	3/11/17	Scaffold	SC	SAMEA1028892	GCA_001346195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/195/GCA_001346195.1_7011_4_20	-	SMRU2780
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.20667	50.9	-	NSEI01	440	5566	4921	9/12/17	9/14/17	Contig	US Food and Drug Administration	SAMN04158434	GCA_002290905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/905/GCA_002290905.1_ASM229090v1	-	JEONG-5298
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72256	52	-	CJMG01	49	4891	4522	3/21/15	2/27/17	Scaffold	SC	SAMEA2145676	GCA_001102745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/745/GCA_001102745.1_10607_1_95	-	2012-015100
Staphylococcus aureus	1280	PRJNA389380	389380	Terrabacteria group	Firmicutes	2.81734	32.9	-	NISC01	30	2923	2754	6/21/17	6/24/17	Contig	University of Zurich	SAMN07201052	GCA_002204735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/735/GCA_002204735.1_ASM220473v1	-	S681
Staphylococcus aureus subsp. aureus	46170	PRJNA302365	302365	Terrabacteria group	Firmicutes	2.71468	32.9	-	LNJF01	61	2818	2659	6/26/17	6/28/17	Contig	Genomic Research Laboratory (GRL)	SAMN04272700	GCA_002208335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/335/GCA_002208335.1_ASM220833v1	28166723	SA13-192
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJEB2770	204451	Proteobacteria	Gammaproteobacteria	4.75305	52	-	CJRW01	41	4918	4555	3/21/15	2/27/17	Scaffold	SC	SAMEA1687833	GCA_001102865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/865/GCA_001102865.1_8616_4_55	-	SP11
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.2145	50.8	-	NSEL01	364	5576	4934	9/12/17	9/14/17	Contig	US Food and Drug Administration	SAMN04160753	GCA_002290925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/925/GCA_002290925.1_ASM229092v1	-	JEONG-5453
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.09989	39.6	-	CHVM01	64	2342	2097	4/21/15	3/11/17	Scaffold	SC	SAMEA1028896	GCA_001346215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/215/GCA_001346215.1_6949_1_18	-	SMRU2418
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05191	39.7	-	CHVL01	47	2285	2052	4/21/15	3/11/17	Scaffold	SC	SAMEA1028900	GCA_001346235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/235/GCA_001346235.1_6949_4_21	-	SMRU2493
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.18976	50.9	-	NSEM01	458	5546	4909	9/12/17	9/14/17	Contig	US Food and Drug Administration	SAMN04160754	GCA_002290945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/945/GCA_002290945.1_ASM229094v1	-	JEONG-5507
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72651	52	-	CJQV01	43	4887	4535	3/21/15	2/27/17	Scaffold	SC	SAMEA1572857	GCA_001102885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/102/885/GCA_001102885.1_8490_6_69	-	MDUST69
Staphylococcus aureus subsp. aureus	46170	PRJNA302366	302366	Terrabacteria group	Firmicutes	2.86823	32.9	-	LNKW01	98	3038	2847	6/26/17	6/28/17	Contig	Genomic Research Laboratory (GRL)	SAMN04272701	GCA_002208345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/345/GCA_002208345.1_ASM220834v1	28166723	SA33924
Staphylococcus aureus subsp. aureus	46170	PRJNA302371	302371	Terrabacteria group	Firmicutes	2.6851	32.8	-	LNJK01	26	2757	2592	6/26/17	6/28/17	Contig	Genomic Research Laboratory (GRL)	SAMN04272706	GCA_002208375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/375/GCA_002208375.1_ASM220837v1	28166723	SA13-246
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72007	52	-	CIXV01	56	4896	4512	3/21/15	2/27/17	Scaffold	SC	SAMEA1972509	GCA_001103005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/005/GCA_001103005.1_10349_1_63	-	ERL10504
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.13284	51	-	NSEN01	555	5448	4873	9/12/17	9/14/17	Contig	US Food and Drug Administration	SAMN04160755	GCA_002290955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/955/GCA_002290955.1_ASM229095v1	-	JEONG-5511
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.086	39.8	-	CFCI01	62	2306	2083	3/15/15	3/14/17	Scaffold	SC	SAMEA1028902	GCA_001346255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/255/GCA_001346255.1_6949_3_6	-	SMRU2454
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.15127	39.5	-	CHVU01	81	2393	2134	4/21/15	3/11/17	Scaffold	SC	SAMEA1028953	GCA_001346315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/315/GCA_001346315.1_7011_4_6	-	SMRU2766
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.79764	50.8	-	NSEO01	172	4843	4557	9/12/17	9/14/17	Contig	US Food and Drug Administration	SAMN04160756	GCA_002290985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/985/GCA_002290985.1_ASM229098v1	-	JEONG-5617
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73634	52	-	CJCJ01	58	4898	4534	3/21/15	2/27/17	Scaffold	SC	SAMEA2143731	GCA_001103145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/145/GCA_001103145.1_10493_1_67	-	MDUST301
Staphylococcus aureus subsp. aureus	46170	PRJNA302368	302368	Terrabacteria group	Firmicutes	2.67948	32.8	-	LNJH01	25	2760	2600	6/26/17	6/28/17	Contig	Genomic Research Laboratory (GRL)	SAMN04272703	GCA_002208395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/395/GCA_002208395.1_ASM220839v1	28166723	SA10-285
Staphylococcus aureus subsp. aureus	46170	PRJNA302367	302367	Terrabacteria group	Firmicutes	2.75887	32.9	-	LNJG01	44	2853	2696	6/26/17	6/28/17	Contig	Genomic Research Laboratory (GRL)	SAMN04272702	GCA_002208415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/415/GCA_002208415.1_ASM220841v1	28166723	SA10-17
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3164	204701	Proteobacteria	Gammaproteobacteria	4.94001	51.8	-	CJRA01	50	5134	4752	3/21/15	2/27/17	Scaffold	SC	SAMEA1572012	GCA_001103165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/165/GCA_001103165.1_8525_3_30	-	Ke451
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.80631	50.7	-	NSEQ01	103	4847	4571	9/12/17	9/14/17	Contig	US Food and Drug Administration	SAMN04160759	GCA_002290995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/995/GCA_002290995.1_ASM229099v1	-	JEONG-5766
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.1347	39.6	-	CFDR01	68	2355	2120	3/15/15	3/11/17	Scaffold	SC	SAMEA1028959	GCA_001346335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/335/GCA_001346335.1_6983_7_59	-	SMRU2363
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08048	39.5	-	CIIE01	53	2279	2042	4/21/15	3/14/17	Scaffold	SC	SAMEA1028991	GCA_001346455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/455/GCA_001346455.1_6949_1_12	-	SMRU2412
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.30073	50.5	-	NSER01	133	5545	5129	9/12/17	9/14/17	Contig	US Food and Drug Administration	SAMN04160760	GCA_002291025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/025/GCA_002291025.1_ASM229102v1	-	JEONG-5776
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.87334	51.9	-	CJFB01	66	5087	4703	3/21/15	2/27/17	Scaffold	SC	SAMEA2151064	GCA_001103305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/305/GCA_001103305.1_10561_2_16	-	3632/3
Staphylococcus aureus subsp. aureus	46170	PRJNA302372	302372	Terrabacteria group	Firmicutes	2.69304	32.8	-	LNJL01	27	2770	2608	6/26/17	6/28/17	Contig	Genomic Research Laboratory (GRL)	SAMN04272707	GCA_002208435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/435/GCA_002208435.1_ASM220843v1	28166723	SA14-118
Staphylococcus aureus subsp. aureus	46170	PRJNA302370	302370	Terrabacteria group	Firmicutes	2.7672	32.9	-	LNJJ01	31	2906	2735	6/26/17	6/28/17	Contig	Genomic Research Laboratory (GRL)	SAMN04272705	GCA_002208455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/455/GCA_002208455.1_ASM220845v1	28166723	SA12-154
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72956	52	-	CJPZ01	40	4894	4536	3/21/15	2/27/17	Scaffold	SC	SAMEA1572767	GCA_001103385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/385/GCA_001103385.1_8490_5_4	-	MDUST4
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.1698	50.9	-	NSED01	404	5537	4898	9/12/17	9/14/17	Contig	US Food and Drug Administration	SAMN04158429	GCA_002291035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/035/GCA_002291035.1_ASM229103v1	-	JEONG-5084
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12166	39.6	-	CHVK01	49	2339	2122	4/21/15	3/11/17	Scaffold	SC	SAMEA1029017	GCA_001346575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/575/GCA_001346575.1_6938_7_9	-	SMRU2697
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.2102	39.4	-	CGZH01	89	2437	2194	4/21/15	3/11/17	Scaffold	SC	SAMEA1029039	GCA_001346615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/615/GCA_001346615.1_6938_6_4	-	SMRU2668
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.1568	50.8	-	NSEE01	468	5551	4890	9/12/17	9/14/17	Contig	US Food and Drug Administration	SAMN04158430	GCA_002291055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/055/GCA_002291055.1_ASM229105v1	-	JEONG-5114
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7314	52.1	-	CJIS01	44	4908	4561	3/21/15	2/27/17	Scaffold	SC	SAMEA1929438	GCA_001103485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/485/GCA_001103485.1_10592_2_19	-	2064
Staphylococcus aureus subsp. aureus	46170	PRJNA302373	302373	Terrabacteria group	Firmicutes	2.74422	33	-	LNJM01	49	2835	2680	6/26/17	6/28/17	Contig	Genomic Research Laboratory (GRL)	SAMN04272708	GCA_002208475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/475/GCA_002208475.1_ASM220847v1	28166723	SA14-265
Staphylococcus aureus subsp. aureus	46170	PRJNA302377	302377	Terrabacteria group	Firmicutes	2.73027	32.9	-	LNJN01	34	2819	2654	6/26/17	6/28/17	Contig	Genomic Research Laboratory (GRL)	SAMN04272709	GCA_002208485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/485/GCA_002208485.1_ASM220848v1	28166723	SA14-613
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72891	52	-	CJOV01	43	4890	4533	3/21/15	2/27/17	Scaffold	SC	SAMEA1572769	GCA_001103505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/505/GCA_001103505.1_8447_8_20	-	MDUST92
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.82135	50.7	-	NSEJ01	247	4858	4573	9/12/17	9/14/17	Contig	US Food and Drug Administration	SAMN04160751	GCA_002291085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/085/GCA_002291085.1_ASM229108v1	-	JEONG-5413
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05782	39.7	-	CFDM01	55	2265	2038	3/15/15	3/11/17	Scaffold	SC	SAMEA1029040	GCA_001346635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/635/GCA_001346635.1_6938_6_14	-	SMRU2678
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05807	39.5	-	CGZK01	83	2257	2039	4/21/15	3/11/17	Scaffold	SC	SAMEA1029049	GCA_001346675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/675/GCA_001346675.1_6949_4_4	-	SMRU2476
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.60726	50.4	-	NSEK01	417	6212	5599	9/12/17	9/14/17	Contig	US Food and Drug Administration	SAMN04160752	GCA_002291105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/105/GCA_002291105.1_ASM229110v1	-	JEONG-5446
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74831	52.1	-	CJMX01	50	4923	4567	3/21/15	2/27/17	Scaffold	SC	SAMEA1967478	GCA_001103885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/885/GCA_001103885.1_10607_2_8	-	1004971
Staphylococcus aureus subsp. aureus	46170	PRJNA302379	302379	Terrabacteria group	Firmicutes	2.84156	32.8	-	LNKX01	35	2953	2769	6/26/17	6/28/17	Contig	Genomic Research Laboratory (GRL)	SAMN04272711	GCA_002208515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/515/GCA_002208515.1_ASM220851v1	28166723	SA33972
Staphylococcus aureus subsp. aureus	46170	PRJNA302369	302369	Terrabacteria group	Firmicutes	2.69896	32.8	-	LNJI01	25	2778	2610	6/26/17	6/28/17	Contig	Genomic Research Laboratory (GRL)	SAMN04272704	GCA_002208535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/535/GCA_002208535.1_ASM220853v1	28166723	SA11-192
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73658	52	-	CEYX01	58	4893	4530	3/9/15	2/27/17	Scaffold	SC	SAMEA2149175	GCA_001103905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/905/GCA_001103905.1_10541_2_55	-	MDUST356
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.08121	50.9	-	NSEP01	437	5354	4761	9/12/17	9/14/17	Contig	US Food and Drug Administration	SAMN04160758	GCA_002291115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/291/115/GCA_002291115.1_ASM229111v1	-	JEONG-5650
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.08469	39.6	-	CICY01	81	2331	2095	4/21/15	3/11/17	Scaffold	SC	SAMEA1029051	GCA_001346695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/695/GCA_001346695.1_6983_7_57	-	SMRU2361
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.05599	39.5	-	CHVR01	72	2271	2056	4/21/15	3/11/17	Scaffold	SC	SAMEA1029067	GCA_001346735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/735/GCA_001346735.1_7004_6_34	-	SMRU2842
Escherichia coli	562	PRJNA221632	221632	Proteobacteria	Gammaproteobacteria	5.2116	50.7	-	NTMT01	130	5419	5051	9/17/17	9/19/17	Contig	FDA	SAMN07624462	GCA_002307515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/515/GCA_002307515.1_ASM230751v1	-	N60592
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7245	52	-	CJPS01	44	4896	4532	3/21/15	2/27/17	Scaffold	SC	SAMEA1572853	GCA_001103945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/945/GCA_001103945.1_8490_5_28	-	MDUST28
Staphylococcus aureus subsp. aureus	46170	PRJNA302378	302378	Terrabacteria group	Firmicutes	2.7079	32.8	-	LNJO01	28	2774	2611	6/26/17	6/28/17	Contig	Genomic Research Laboratory (GRL)	SAMN04272710	GCA_002208555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/208/555/GCA_002208555.1_ASM220855v1	28166723	SA14-639
Staphylococcus aureus	1280	PRJNA390897	390897	Terrabacteria group	Firmicutes	2.88308	32.7	-	NKCS01	75	3007	2885	6/27/17	6/29/17	Contig	"Austrian Agency for Health and Food Safety, Vienna, Austria"	SAMN07252143	GCA_002209825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/825/GCA_002209825.1_ASM220982v1	-	H5
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7189	52	-	CILQ01	48	4871	4513	3/21/15	2/27/17	Scaffold	SC	SAMEA1572848	GCA_001104205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/205/GCA_001104205.1_8490_6_60	-	MDUST60
Escherichia coli	562	PRJNA221632	221632	Proteobacteria	Gammaproteobacteria	4.98117	50.7	-	NTMS01	189	5230	4795	9/17/17	9/19/17	Contig	FDA	SAMN07624463	GCA_002307525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/525/GCA_002307525.1_ASM230752v1	-	N63148
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.1169	39.5	-	CGZO01	44	2331	2113	4/21/15	3/11/17	Scaffold	SC	SAMEA1029085	GCA_001346815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/815/GCA_001346815.1_6972_5_4	-	SMRU2620
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.23704	39.4	-	CHHX01	93	2477	2218	4/21/15	3/11/17	Scaffold	SC	SAMEA1029087	GCA_001346835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/835/GCA_001346835.1_6949_2_14	-	SMRU2438
Escherichia coli	562	PRJNA221632	221632	Proteobacteria	Gammaproteobacteria	5.02468	50.7	-	NTMV01	166	5269	4906	9/17/17	9/19/17	Contig	FDA	SAMN07624460	GCA_002307555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/555/GCA_002307555.1_ASM230755v1	-	N58201
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70759	52.1	-	CJJZ01	47	4872	4516	3/21/15	2/27/17	Scaffold	SC	SAMEA1930190	GCA_001104345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/345/GCA_001104345.1_10592_2_73	-	E01-8716
Staphylococcus aureus	1280	PRJNA390897	390897	Terrabacteria group	Firmicutes	2.88863	32.7	-	NKCT01	121	3022	2875	6/27/17	6/29/17	Contig	"Austrian Agency for Health and Food Safety, Vienna, Austria"	SAMN07252142	GCA_002209835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/835/GCA_002209835.1_ASM220983v1	-	H4
Staphylococcus aureus	1280	PRJNA390897	390897	Terrabacteria group	Firmicutes	2.71998	32.6	-	NKCR01	188	2779	2681	6/27/17	6/29/17	Contig	"Austrian Agency for Health and Food Safety, Vienna, Austria"	SAMN07252144	GCA_002209845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/845/GCA_002209845.1_ASM220984v1	-	H6
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93234	51.8	-	CJMD01	58	5125	4741	3/21/15	2/27/17	Scaffold	SC	SAMEA2155664	GCA_001104465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/465/GCA_001104465.1_10607_1_85	-	2012-011344
Escherichia coli	562	PRJNA221632	221632	Proteobacteria	Gammaproteobacteria	4.89879	50.6	-	NTMU01	116	5126	4755	9/17/17	9/19/17	Contig	FDA	SAMN07624461	GCA_002307565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/565/GCA_002307565.1_ASM230756v1	-	N60559
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.22801	39.6	-	CFEY01	76	2469	2228	3/15/15	3/11/17	Scaffold	SC	SAMEA1029090	GCA_001346875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/875/GCA_001346875.1_7004_5_12	-	SMRU2868
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.2503	39.4	-	CHIC01	78	2473	2221	4/21/15	3/11/17	Scaffold	SC	SAMEA1029099	GCA_001346895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/895/GCA_001346895.1_7004_5_13	-	SMRU2869
Escherichia coli	562	PRJNA221632	221632	Proteobacteria	Gammaproteobacteria	5.38065	50.6	-	NTMX01	257	5762	5269	9/17/17	9/19/17	Contig	FDA	SAMN07624458	GCA_002307595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/595/GCA_002307595.1_ASM230759v1	-	N56041
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82753	52	-	CJCE01	56	5022	4632	3/21/15	2/27/17	Scaffold	SC	SAMEA2160229	GCA_001104545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/545/GCA_001104545.1_10493_1_54	-	MDUST282
Staphylococcus aureus	1280	PRJNA390897	390897	Terrabacteria group	Firmicutes	3.00122	33.8	-	NKCX01	380	3065	2907	6/27/17	6/29/17	Contig	"Austrian Agency for Health and Food Safety, Vienna, Austria"	SAMN07252137	GCA_002209885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/885/GCA_002209885.1_ASM220988v1	-	W1
Staphylococcus aureus	1280	PRJNA390897	390897	Terrabacteria group	Firmicutes	2.89002	32.8	-	NKCV01	228	3011	2879	6/27/17	6/29/17	Contig	"Austrian Agency for Health and Food Safety, Vienna, Austria"	SAMN07252139	GCA_002209895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/895/GCA_002209895.1_ASM220989v1	-	H2
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73368	52	-	CJBK01	48	4889	4546	3/21/15	2/27/17	Scaffold	SC	SAMEA2155481	GCA_001104565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/565/GCA_001104565.1_10493_1_2	-	MDUST109
Escherichia coli	562	PRJNA221632	221632	Proteobacteria	Gammaproteobacteria	5.26711	50.5	-	NTMY01	223	5571	5163	9/17/17	9/19/17	Contig	FDA	SAMN07624457	GCA_002307615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/615/GCA_002307615.1_ASM230761v1	-	N53976
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.10599	39.7	-	CIDB01	69	2351	2124	4/21/15	3/11/17	Scaffold	SC	SAMEA1029100	GCA_001346915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/915/GCA_001346915.1_7011_6_22	-	SMRU2830
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.11626	39.6	-	CFGP01	66	2349	2106	3/15/15	3/11/17	Scaffold	SC	SAMEA1029105	GCA_001346935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/935/GCA_001346935.1_7004_6_40	-	SMRU2848
Escherichia coli	562	PRJNA221632	221632	Proteobacteria	Gammaproteobacteria	5.39309	50.6	-	NTMW01	205	5808	5336	9/17/17	9/19/17	Contig	FDA	SAMN07624459	GCA_002307635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/635/GCA_002307635.1_ASM230763v1	-	N56738
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72557	52	-	CJCK01	62	4894	4530	3/21/15	2/27/17	Scaffold	SC	SAMEA2156021	GCA_001104685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/685/GCA_001104685.1_10493_1_68	-	MDUST313
Staphylococcus aureus	1280	PRJNA390897	390897	Terrabacteria group	Firmicutes	2.8755	32.6	-	NKCP01	173	3021	2874	6/27/17	6/29/17	Contig	"Austrian Agency for Health and Food Safety, Vienna, Austria"	SAMN07252146	GCA_002209905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/905/GCA_002209905.1_ASM220990v1	-	H8
Staphylococcus aureus	1280	PRJNA390897	390897	Terrabacteria group	Firmicutes	2.85939	32.7	-	NKCU01	142	2993	2863	6/27/17	6/29/17	Contig	"Austrian Agency for Health and Food Safety, Vienna, Austria"	SAMN07252141	GCA_002209945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/945/GCA_002209945.1_ASM220994v1	-	H3
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69467	52.1	-	CJGM01	40	4843	4500	3/21/15	2/27/17	Scaffold	SC	SAMEA2157711	GCA_001104705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/705/GCA_001104705.1_10562_2_20	-	MDUST192
Escherichia coli	562	PRJNA389557	389557	Proteobacteria	Gammaproteobacteria	5.11828	50.7	-	NQBL01	258	5540	5201	9/20/17	9/22/17	Contig	JCVI	SAMN07450643	GCA_002317955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/955/GCA_002317955.1_ASM231795v1	-	ECLC+05
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.12974	39.4	-	CIDJ01	68	2336	2074	4/21/15	3/11/17	Scaffold	SC	SAMEA1029121	GCA_001346955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/955/GCA_001346955.1_7011_3_14	-	SMRU2750
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.16576	39.5	-	CFHF01	79	2408	2174	3/15/15	3/5/17	Scaffold	SC	SAMEA1029125	GCA_001346975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/975/GCA_001346975.1_7011_3_5	-	SMRU2741
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	4.90856	50.7	-	NWAA01	268	5435	4927	9/20/17	9/22/17	Contig	USDA	SAMN07488871	GCA_002319115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/115/GCA_002319115.1_ASM231911v1	-	T186
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9318	51.8	-	CJUQ01	51	5125	4752	3/21/15	2/27/17	Scaffold	SC	SAMEA2056502	GCA_001104905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/905/GCA_001104905.1_9870_8_26	-	2007-013365
Staphylococcus aureus	1280	PRJNA390897	390897	Terrabacteria group	Firmicutes	2.87007	32.7	-	NKCW01	48	2990	2873	6/27/17	6/29/17	Contig	"Austrian Agency for Health and Food Safety, Vienna, Austria"	SAMN07252138	GCA_002209955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/209/955/GCA_002209955.1_ASM220995v1	-	H1
Staphylococcus aureus	1280	PRJNA390897	390897	Terrabacteria group	Firmicutes	2.88935	32.6	-	NKCQ01	284	3016	2878	6/27/17	6/29/17	Contig	"Austrian Agency for Health and Food Safety, Vienna, Austria"	SAMN07252145	GCA_002210005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/210/005/GCA_002210005.1_ASM221000v1	-	H7
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.75328	52	-	CIZO01	52	4918	4551	3/21/15	2/27/17	Scaffold	SC	SAMEA2159791	GCA_001104925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/104/925/GCA_001104925.1_10492_1_31	-	MDUST216
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	5.00411	50.6	-	NWAJ01	139	5337	4915	9/20/17	9/22/17	Contig	USDA	SAMN07488860	GCA_002319135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/135/GCA_002319135.1_ASM231913v1	-	F469
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.22045	39.4	-	CGZY01	92	2464	2211	4/21/15	3/5/17	Scaffold	SC	SAMEA1029132	GCA_001346995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/995/GCA_001346995.1_7011_4_19	-	SMRU2779
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.15604	40	-	CFGI01	32	2186	1981	3/15/15	3/5/17	Scaffold	SC	SAMEA1029140	GCA_001347015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/015/GCA_001347015.1_6938_6_7	-	19F
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	4.95458	50.7	-	NWAE01	75	5161	4815	9/20/17	9/22/17	Contig	USDA	SAMN07488865	GCA_002319155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/155/GCA_002319155.1_ASM231915v1	-	JAN 020
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72992	52	-	CJQD01	42	4886	4530	3/21/15	2/27/17	Scaffold	SC	SAMEA1572803	GCA_001105025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/025/GCA_001105025.1_8490_6_38	-	MDUST38
Staphylococcus aureus	1280	PRJNA302945	302945	Terrabacteria group	Firmicutes	2.87434	32.9	-	LYLV01	106	2967	2776	7/20/17	7/22/17	Contig	NHGRI	SAMN04286980	GCA_002221815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/815/GCA_002221815.1_ASM222181v1	-	ABFQT
Staphylococcus aureus	1280	PRJNA279625	279625	Terrabacteria group	Firmicutes	2.76551	32.8	-	LYLW01	39	2836	2690	7/20/17	7/22/17	Contig	NHGRI	SAMN03455945	GCA_002221845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/845/GCA_002221845.1_ASM222184v1	-	AATYQ
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.98051	52.1	-	CQGG01	56	5154	4886	3/23/15	2/27/17	Scaffold	SC	SAMEA1568463	GCA_001105145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/145/GCA_001105145.1_8490_2_50	-	CH7
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	5.07331	50.7	-	NWAI01	203	5548	5090	9/20/17	9/22/17	Contig	USDA	SAMN07488861	GCA_002319165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/165/GCA_002319165.1_ASM231916v1	-	F498
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.16859	39.5	-	CHVJ01	77	2432	2166	4/21/15	3/5/17	Scaffold	SC	SAMEA1029175	GCA_001347115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/115/GCA_001347115.1_6938_8_14	-	SMRU2726
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.03413	39.7	-	CHVT01	68	2221	2024	4/21/15	3/5/17	Scaffold	SC	SAMEA1029180	GCA_001347135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/135/GCA_001347135.1_7004_7_71	-	SMRU2903
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	5.13051	50.7	-	NWAF01	120	5428	5104	9/20/17	9/22/17	Contig	USDA	SAMN07488864	GCA_002319185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/185/GCA_002319185.1_ASM231918v1	-	IMP 886
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74291	52.1	-	CJML01	49	4919	4552	3/21/15	2/27/17	Scaffold	SC	SAMEA2151649	GCA_001105225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/225/GCA_001105225.1_10607_2_15	-	BKQ4SJ
Staphylococcus aureus	1280	PRJNA303008	303008	Terrabacteria group	Firmicutes	2.74201	32.7	-	LYLS01	77	2864	2687	7/20/17	7/22/17	Contig	NHGRI	SAMN04287041	GCA_002221895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/895/GCA_002221895.1_ASM222189v1	-	ABKWS
Staphylococcus aureus	1280	PRJNA303009	303009	Terrabacteria group	Firmicutes	2.80508	32.7	-	LYLR01	90	2902	2699	7/20/17	7/22/17	Contig	NHGRI	SAMN04287042	GCA_002221905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/221/905/GCA_002221905.1_ASM222190v1	-	ABKWT
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.68243	52.1	-	CIXI01	41	4837	4486	3/21/15	2/27/17	Scaffold	SC	SAMEA2072891	GCA_001105525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/525/GCA_001105525.1_10349_1_5	-	ERL024182
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	5.31546	50.6	-	NWAK01	137	5839	5403	9/20/17	9/22/17	Contig	USDA	SAMN07488859	GCA_002319195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/195/GCA_002319195.1_ASM231919v1	-	F426
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.0859	39.6	-	CFGN01	53	2307	2065	3/15/15	3/5/17	Scaffold	SC	SAMEA1029181	GCA_001347155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/155/GCA_001347155.1_7054_6_6	-	SMRU3078
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.06379	39.7	-	CFCL01	58	2260	1995	3/15/15	3/5/17	Scaffold	SC	SAMEA1029187	GCA_001347175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/175/GCA_001347175.1_7038_4_3	-	SMRU2931
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	4.99213	50.7	-	NWAM01	146	5417	5012	9/20/17	9/22/17	Contig	USDA	SAMN07488857	GCA_002319235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/235/GCA_002319235.1_ASM231923v1	-	F344
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70942	52.1	-	CJHY01	60	4878	4515	3/21/15	2/27/17	Scaffold	SC	SAMEA2145414	GCA_001105625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/625/GCA_001105625.1_10562_2_68	-	MDUST378
Staphylococcus aureus	1280	PRJNA385553	385553	Terrabacteria group	Firmicutes	2.82764	32.8	-	NFZY01	151	2935	2736	7/25/17	8/3/17	Contig	National University Research Institute	SAMN06894057	GCA_002224825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/825/GCA_002224825.1_ASM222482v1	-	SO-1977
Staphylococcus aureus	1280	PRJNA362498	362498	Terrabacteria group	Firmicutes	2.76265	32.7	-	NADC01	71	2858	2665	8/11/17	8/15/17	Contig	Chang Gung Memorial Hospital	SAMN06241395	GCA_002247005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/005/GCA_002247005.1_ASM224700v1	-	TSAR03
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72097	52	-	CJBJ01	51	4879	4520	3/21/15	2/27/17	Scaffold	SC	SAMEA2148302	GCA_001105805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/805/GCA_001105805.1_10493_1_18	-	MDUST153
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	5.01247	50.7	-	NWAR01	141	5394	5007	9/20/17	9/22/17	Contig	USDA	SAMN07488852	GCA_002319255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/255/GCA_002319255.1_ASM231925v1	-	ED-53
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.08014	39.7	-	CFHO01	58	2309	2082	3/15/15	3/5/17	Scaffold	SC	SAMEA1029188	GCA_001347195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/195/GCA_001347195.1_7054_5_10	-	SMRU3058
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.075	39.6	-	CIJY01	56	2277	2041	4/21/15	3/5/17	Scaffold	SC	SAMEA1029189	GCA_001347215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/215/GCA_001347215.1_7038_6_24	-	SMRU3000
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	5.07816	50.7	-	NWBA01	116	5474	5064	9/20/17	9/22/17	Contig	USDA	SAMN07488843	GCA_002319275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/275/GCA_002319275.1_ASM231927v1	-	C092
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93234	51.8	-	CJMC01	58	5130	4743	3/21/15	2/27/17	Scaffold	SC	SAMEA2158094	GCA_001105825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/825/GCA_001105825.1_10607_1_89	-	2012-010616
Staphylococcus aureus	1280	PRJNA362498	362498	Terrabacteria group	Firmicutes	2.83643	32.8	-	NADA01	68	2962	2796	8/11/17	8/15/17	Contig	Chang Gung Memorial Hospital	SAMN06241393	GCA_002247015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/015/GCA_002247015.1_ASM224701v1	-	TSAR01
Staphylococcus aureus	1280	PRJNA362498	362498	Terrabacteria group	Firmicutes	2.81283	32.7	-	NADD01	75	2938	2741	8/11/17	8/15/17	Contig	Chang Gung Memorial Hospital	SAMN06241396	GCA_002247045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/045/GCA_002247045.1_ASM224704v1	-	TSAR04
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72381	52	-	CJQK01	45	4885	4525	3/21/15	2/27/17	Scaffold	SC	SAMEA1572833	GCA_001105845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/105/845/GCA_001105845.1_8490_6_51	-	MDUST51
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	5.11486	50.7	-	NWAX01	151	5564	5153	9/20/17	9/22/17	Contig	USDA	SAMN07488846	GCA_002319295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/295/GCA_002319295.1_ASM231929v1	-	C165
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.21002	39.5	-	CIDH01	81	2443	2185	4/21/15	3/5/17	Scaffold	SC	SAMEA1029199	GCA_001347235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/235/GCA_001347235.1_7054_5_9	-	SMRU3057
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.0825	39.5	-	CICW01	72	2274	2068	4/21/15	3/5/17	Scaffold	SC	SAMEA1029213	GCA_001347255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/255/GCA_001347255.1_6938_3_29	-	SMRU3154
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	4.95364	50.6	-	NWBC01	110	5218	4891	9/20/17	9/22/17	Contig	USDA	SAMN07488841	GCA_002319315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/315/GCA_002319315.1_ASM231931v1	-	C040
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72117	52	-	CJFO01	56	4873	4513	3/21/15	2/27/17	Scaffold	SC	SAMEA2159733	GCA_001106065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/065/GCA_001106065.1_10561_2_33	-	np83
Staphylococcus aureus	1280	PRJNA362498	362498	Terrabacteria group	Firmicutes	2.79288	32.7	-	NADI01	63	2914	2721	8/11/17	8/15/17	Contig	Chang Gung Memorial Hospital	SAMN06241401	GCA_002247065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/065/GCA_002247065.1_ASM224706v1	-	QR502
Staphylococcus aureus	1280	PRJNA362498	362498	Terrabacteria group	Firmicutes	2.76193	32.7	-	NADF01	66	2862	2669	8/11/17	8/15/17	Contig	Chang Gung Memorial Hospital	SAMN06241398	GCA_002247085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/085/GCA_002247085.1_ASM224708v1	-	TSAR06
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93239	51.8	-	CIUL01	61	5137	4751	3/21/15	2/27/17	Scaffold	SC	SAMEA2067731	GCA_001106625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/625/GCA_001106625.1_10071_8_92	-	2010K-0538
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	5.72135	50.4	-	NWBE01	278	6428	5963	9/20/17	9/22/17	Contig	USDA	SAMN07488839	GCA_002319335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/335/GCA_002319335.1_ASM231933v1	-	94-0426
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.10449	39.5	-	CHWC01	63	2314	2062	4/21/15	3/5/17	Scaffold	SC	SAMEA1029219	GCA_001347295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/295/GCA_001347295.1_7054_4_10	-	SMRU3034
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09825	39.5	-	CFGL01	41	2307	2070	3/15/15	3/5/17	Scaffold	SC	SAMEA1029220	GCA_001347315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/315/GCA_001347315.1_7068_4_16	-	SMRU3136
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	5.01945	50.4	-	NWBF01	105	5289	4853	9/20/17	9/22/17	Contig	USDA	SAMN07488838	GCA_002319355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/355/GCA_002319355.1_ASM231935v1	-	65-57
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73631	52	-	CJAN01	61	4898	4549	3/21/15	2/27/17	Scaffold	SC	SAMEA2154858	GCA_001106665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/665/GCA_001106665.1_10492_1_65	-	MDUST355
Staphylococcus aureus	1280	PRJNA362498	362498	Terrabacteria group	Firmicutes	2.82039	32.7	-	NADG01	86	2953	2750	8/11/17	8/15/17	Contig	Chang Gung Memorial Hospital	SAMN06241400	GCA_002247105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/105/GCA_002247105.1_ASM224710v1	-	TSAR08
Staphylococcus aureus	1280	PRJNA362498	362498	Terrabacteria group	Firmicutes	2.81033	32.7	-	NADH01	66	2944	2743	8/11/17	8/15/17	Contig	Chang Gung Memorial Hospital	SAMN06241399	GCA_002247125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/125/GCA_002247125.1_ASM224712v1	-	TSAR07
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72676	52	-	CJPH01	46	4891	4538	3/21/15	2/27/17	Scaffold	SC	SAMEA1572813	GCA_001106785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/785/GCA_001106785.1_8490_5_11	-	MDUST11
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	5.32404	50.6	-	NWAC01	183	5888	5483	9/20/17	9/22/17	Contig	USDA	SAMN07488867	GCA_002319375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/375/GCA_002319375.1_ASM231937v1	-	T097
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11899	39.4	-	CIKW01	66	2312	2075	4/21/15	3/5/17	Scaffold	SC	SAMEA1029225	GCA_001347335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/335/GCA_001347335.1_7004_7_57	-	SMRU2889
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.13271	39.6	-	CHWA01	49	2366	2116	4/21/15	3/5/17	Scaffold	SC	SAMEA1029232	GCA_001347355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/355/GCA_001347355.1_7038_6_10	-	SMRU2986
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	5.14471	50.5	-	NWBG01	143	5539	5103	9/20/17	9/22/17	Contig	USDA	SAMN07488837	GCA_002319385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/385/GCA_002319385.1_ASM231938v1	-	2185
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7372	52	-	CJXC01	52	4892	4543	3/21/15	2/27/17	Scaffold	SC	SAMEA2056361	GCA_001106825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/825/GCA_001106825.1_9953_5_27	-	A347
Staphylococcus aureus	1280	PRJNA362498	362498	Terrabacteria group	Firmicutes	2.81352	32.8	-	NADB01	69	2935	2740	8/11/17	8/15/17	Contig	Chang Gung Memorial Hospital	SAMN06241394	GCA_002247245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/245/GCA_002247245.1_ASM224724v1	-	TSAR02
Staphylococcus aureus	1280	PRJNA362498	362498	Terrabacteria group	Firmicutes	2.90087	32.7	-	NADE01	53	3063	2890	8/11/17	8/15/17	Contig	Chang Gung Memorial Hospital	SAMN06241397	GCA_002247315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/247/315/GCA_002247315.1_ASM224731v1	-	TSAR05
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7228	52	-	CJQY01	44	4878	4522	3/21/15	2/27/17	Scaffold	SC	SAMEA1572830	GCA_001107045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/045/GCA_001107045.1_8490_6_72	-	MDUST72
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	5.26945	50.6	-	NWAG01	144	5647	5284	9/20/17	9/22/17	Contig	USDA	SAMN07488863	GCA_002319415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/415/GCA_002319415.1_ASM231941v1	-	IMP 871
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.04817	39.8	-	CFCM01	54	2268	2049	3/15/15	3/5/17	Scaffold	SC	SAMEA1029246	GCA_001347375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/375/GCA_001347375.1_7092_6_13	-	SMRU3109
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.1262	39.5	-	CHIF01	63	2347	2083	4/21/15	3/5/17	Scaffold	SC	SAMEA1029295	GCA_001347515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/515/GCA_001347515.1_7054_6_5	-	SMRU3077
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	5.13733	50.6	-	NWAT01	129	5568	5187	9/20/17	9/22/17	Contig	USDA	SAMN07488850	GCA_002319435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/435/GCA_002319435.1_ASM231943v1	-	C323
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.86664	51.9	-	CJFC01	63	5064	4689	3/21/15	2/27/17	Scaffold	SC	SAMEA2152293	GCA_001107225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/225/GCA_001107225.1_10561_2_17	-	3139/3
Staphylococcus aureus	1280	PRJNA381316	381316	Terrabacteria group	Firmicutes	2.70373	32.7	-	NCAE01	115	2783	2620	8/14/17	8/16/17	Contig	Universidad Nacional de Colombia	SAMN06052012	GCA_002250135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/135/GCA_002250135.1_ASM225013v1	-	IBUN9014YSA
Staphylococcus aureus	1280	PRJNA354034	354034	Terrabacteria group	Firmicutes	2.70172	32.8	-	NMZD01	60	2784	2600	8/14/17	8/16/17	Contig	NHGRI	SAMN06040412	GCA_002250725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/725/GCA_002250725.1_ASM225072v1	-	ABOJF
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71948	52	-	CJHM01	57	4884	4519	3/21/15	2/27/17	Scaffold	SC	SAMEA2148337	GCA_001107265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/265/GCA_001107265.1_10562_2_51	-	MDUST346
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	5.32518	50.6	-	NWAD01	192	5886	5483	9/20/17	9/22/17	Contig	USDA	SAMN07488866	GCA_002319455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/455/GCA_002319455.1_ASM231945v1	-	T025
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09613	39.5	-	CIHW01	64	2345	2105	4/21/15	3/5/17	Scaffold	SC	SAMEA1029309	GCA_001347535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/535/GCA_001347535.1_7054_5_2	-	SMRU3050
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.10906	39.7	-	CIKJ01	68	2356	2131	4/21/15	3/11/17	Scaffold	SC	SAMEA1029311	GCA_001347555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/555/GCA_001347555.1_7054_4_18	-	SMRU3042
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	5.40736	50.5	-	NWAO01	182	6032	5557	9/20/17	9/22/17	Contig	USDA	SAMN07488855	GCA_002319475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/475/GCA_002319475.1_ASM231947v1	-	F328
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81394	52	-	CIZV01	56	4985	4595	3/21/15	2/27/17	Scaffold	SC	SAMEA2162870	GCA_001107405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/405/GCA_001107405.1_10492_1_40	-	MDUST241
Staphylococcus aureus	1280	PRJNA354033	354033	Terrabacteria group	Firmicutes	2.92454	32.7	-	NMZE01	75	3099	2951	8/14/17	8/16/17	Contig	NHGRI	SAMN06040411	GCA_002250785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/785/GCA_002250785.1_ASM225078v1	-	ABOJE
Staphylococcus aureus	1280	PRJNA303010	303010	Terrabacteria group	Firmicutes	2.78305	32.8	-	NMZG01	142	2887	2705	8/14/17	8/16/17	Contig	NHGRI	SAMN04287043	GCA_002250795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/795/GCA_002250795.1_ASM225079v1	-	ABKWU
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72309	52	-	CJBI01	67	4869	4517	3/21/15	2/27/17	Scaffold	SC	SAMEA2152862	GCA_001107665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/665/GCA_001107665.1_10493_1_15	-	MDUST143
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	5.43201	50.6	-	NWAH01	240	6182	5607	9/20/17	9/22/17	Contig	USDA	SAMN07488862	GCA_002319485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/485/GCA_002319485.1_ASM231948v1	-	F500
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09722	39.5	-	CHAL01	43	2309	2062	4/21/15	3/11/17	Scaffold	SC	SAMEA1029319	GCA_001347575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/575/GCA_001347575.1_7068_4_4	-	SMRU3124
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.06719	39.6	-	CGZC01	52	2259	2025	4/21/15	3/11/17	Scaffold	SC	SAMEA1029326	GCA_001347595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/595/GCA_001347595.1_6938_3_21	-	SMRU3146
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	5.12059	50.7	-	NWAU01	143	5555	5181	9/20/17	9/22/17	Contig	USDA	SAMN07488849	GCA_002319515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/515/GCA_002319515.1_ASM231951v1	-	C322
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93306	51.8	-	CIUJ01	52	5129	4748	3/21/15	2/27/17	Scaffold	SC	SAMEA2066349	GCA_001107745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/745/GCA_001107745.1_10071_8_91	-	2010K-0545
Staphylococcus aureus	1280	PRJNA302949	302949	Terrabacteria group	Firmicutes	2.83326	32.8	-	NMZF01	54	2964	2770	8/14/17	8/16/17	Contig	NHGRI	SAMN04286984	GCA_002250865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/865/GCA_002250865.1_ASM225086v1	-	ABFQX
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.83912	32.9	-	MIID01	467	3028	2775	8/18/17	8/21/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN05721736	GCA_002259985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/985/GCA_002259985.1_ASM225998v1	28760895	UA872
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.93573	51.8	-	CJOK01	55	5135	4756	3/21/15	2/27/17	Scaffold	SC	SAMEA1406363	GCA_001107845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/845/GCA_001107845.1_7468_7_87	-	IB5376
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	5.08674	50.5	-	NWAP01	96	5318	4951	9/20/17	9/22/17	Contig	USDA	SAMN07488854	GCA_002319525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/525/GCA_002319525.1_ASM231952v1	-	F322
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.08721	39.4	-	CFBL01	51	2324	2079	3/15/15	3/14/17	Scaffold	SC	SAMEA1029330	GCA_001347615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/615/GCA_001347615.1_7038_5_17	-	SMRU2969
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.1041	39.5	-	CFGM01	40	2328	2086	3/15/15	3/11/17	Scaffold	SC	SAMEA1029334	GCA_001347635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/635/GCA_001347635.1_7092_6_14	-	SMRU3110
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	4.94705	50.6	-	NWAV01	158	5249	4858	9/20/17	9/22/17	Contig	USDA	SAMN07488848	GCA_002319555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/555/GCA_002319555.1_ASM231955v1	-	C316
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82532	52	-	CJIK01	58	5010	4649	3/21/15	2/27/17	Scaffold	SC	SAMEA2157487	GCA_001107885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/885/GCA_001107885.1_10562_2_85	-	MDUST417
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.89204	32.8	-	MIIE01	314	3054	2854	8/18/17	8/21/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN05721735	GCA_002259995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/259/995/GCA_002259995.1_ASM225999v1	28760895	UA796
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.89074	32.8	-	MIIB01	230	3040	2893	8/18/17	8/21/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN05721738	GCA_002260005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/005/GCA_002260005.1_ASM226000v1	28760895	UB526
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74581	52.1	-	CJSO01	46	4909	4545	3/21/15	2/27/17	Scaffold	SC	SAMEA1903855	GCA_001108025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/025/GCA_001108025.1_9475_6_31	-	1022553
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	5.16791	50.7	-	NWAW01	224	5661	5227	9/20/17	9/22/17	Contig	USDA	SAMN07488847	GCA_002319565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/565/GCA_002319565.1_ASM231956v1	-	C309
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.20528	39.4	-	CHVW01	100	2440	2195	4/21/15	3/11/17	Scaffold	SC	SAMEA1029361	GCA_001347715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/715/GCA_001347715.1_7004_8_92	-	SMRU2924
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.1651	39.5	-	CHIG01	48	2407	2172	4/21/15	3/11/17	Scaffold	SC	SAMEA1029365	GCA_001347735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/735/GCA_001347735.1_7068_4_7	-	SMRU3127
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	5.12233	50.7	-	NWAL01	205	5542	5147	9/20/17	9/22/17	Contig	USDA	SAMN07488858	GCA_002319595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/595/GCA_002319595.1_ASM231959v1	-	F352
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.68438	52.1	-	CIYU01	46	4860	4491	3/21/15	2/27/17	Scaffold	SC	SAMEA2143722	GCA_001108325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/325/GCA_001108325.1_10426_1_5	-	3069/3
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.83379	32.8	-	MIIC01	292	2969	2780	8/18/17	8/21/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN05721737	GCA_002260015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/015/GCA_002260015.1_ASM226001v1	28760895	UB345
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.88696	32.8	-	MIIA01	209	3007	2859	8/18/17	8/21/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN05721739	GCA_002260065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/065/GCA_002260065.1_ASM226006v1	28760895	UB583
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72652	52	-	CJPY01	42	4874	4518	3/21/15	2/27/17	Scaffold	SC	SAMEA1572855	GCA_001108525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/525/GCA_001108525.1_8490_5_35	-	MDUST35
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	5.01814	50.5	-	NWAQ01	136	5312	4942	9/20/17	9/22/17	Contig	USDA	SAMN07488853	GCA_002319615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/615/GCA_002319615.1_ASM231961v1	-	F313
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09969	39.7	-	CHAI01	58	2339	2104	4/21/15	3/11/17	Scaffold	SC	SAMEA1029366	GCA_001347755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/755/GCA_001347755.1_7054_4_21	-	SMRU3045
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09931	39.6	-	CIDN01	56	2270	2056	4/21/15	3/11/17	Scaffold	SC	SAMEA1029373	GCA_001347775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/775/GCA_001347775.1_7068_4_23	-	SMRU3143
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	5.10294	50.7	-	NWAY01	118	5514	5138	9/20/17	9/22/17	Contig	USDA	SAMN07488845	GCA_002319625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/625/GCA_002319625.1_ASM231962v1	-	C114
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73737	52	-	CJXJ01	45	4894	4545	3/21/15	2/27/17	Scaffold	SC	SAMEA2056363	GCA_001108725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/725/GCA_001108725.1_9953_5_33	-	A356
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.8731	32.7	-	MIHY01	428	3073	2854	8/18/17	8/21/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN05721741	GCA_002260075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/075/GCA_002260075.1_ASM226007v1	28760895	UC309
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.78776	32.7	-	MIHZ01	483	2878	2691	8/18/17	8/21/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN05721740	GCA_002260085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/085/GCA_002260085.1_ASM226008v1	28760895	UB657
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72278	52.1	-	CJWZ01	51	4890	4547	3/21/15	2/27/17	Scaffold	SC	SAMEA2057245	GCA_001108885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/108/885/GCA_001108885.1_9953_5_20	-	A287
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	5.42435	50.6	-	NVZZ01	183	6014	5601	9/20/17	9/22/17	Contig	USDA	SAMN07488872	GCA_002319635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/635/GCA_002319635.1_ASM231963v1	-	T297
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.07831	39.7	-	CHIE01	61	2307	2082	4/21/15	3/11/17	Scaffold	SC	SAMEA1029374	GCA_001347795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/795/GCA_001347795.1_7054_4_1	-	SMRU3025
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.10471	39.6	-	CFDP01	64	2319	2061	3/15/15	3/11/17	Scaffold	SC	SAMEA1029379	GCA_001347815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/815/GCA_001347815.1_7054_4_8	-	SMRU3032
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	5.35424	50.6	-	NWAB01	190	5914	5513	9/20/17	9/22/17	Contig	USDA	SAMN07488870	GCA_002319645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/645/GCA_002319645.1_ASM231964v1	-	T168
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70818	52.1	-	CJAY01	57	4860	4511	3/21/15	2/27/17	Scaffold	SC	SAMEA1963906	GCA_001109285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/285/GCA_001109285.1_10492_1_78	-	MDUST397
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.82297	32.6	-	MIHX01	108	2920	2803	8/18/17	8/21/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN05721742	GCA_002260105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/105/GCA_002260105.1_ASM226010v1	28760895	UC312
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.83339	32.7	-	MIHW01	132	2948	2815	8/18/17	8/21/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN05721743	GCA_002260145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/145/GCA_002260145.1_ASM226014v1	28760895	UC622
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.80506	52	-	CJXP01	59	4982	4627	3/21/15	2/27/17	Scaffold	SC	SAMEA2059358	GCA_001109325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/325/GCA_001109325.1_9953_5_40	-	A366
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	5.35143	50.6	-	NWAN01	289	5826	5344	9/20/17	9/22/17	Contig	USDA	SAMN07488856	GCA_002319695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/695/GCA_002319695.1_ASM231969v1	-	F339
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.19106	39.5	-	CHVV01	63	2385	2164	4/21/15	3/11/17	Scaffold	SC	SAMEA1029380	GCA_001347835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/835/GCA_001347835.1_7004_8_95	-	SMRU2927
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.13036	39.5	-	CIHQ01	82	2332	2108	4/21/15	3/11/17	Scaffold	SC	SAMEA1029382	GCA_001347855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/855/GCA_001347855.1_6938_3_32	-	SMRU3157
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	5.14649	50.5	-	NWAZ01	74	5443	5134	9/20/17	9/22/17	Contig	USDA	SAMN07488844	GCA_002319705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/705/GCA_002319705.1_ASM231970v1	-	C104
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB4240	222606	Proteobacteria	Gammaproteobacteria	4.5889	52.1	-	CJDG01	42	4732	4380	3/21/15	2/27/17	Scaffold	SC	SAMEA1966512	GCA_001109525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/525/GCA_001109525.1_10541_1_62	-	ST1625/88
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.8645	32.7	-	MIHV01	161	3010	2840	8/18/17	8/21/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN05721744	GCA_002260165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/165/GCA_002260165.1_ASM226016v1	28760895	UCL409
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.90017	32.7	-	MIHU01	177	3061	2883	8/18/17	8/21/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN05721745	GCA_002260175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/175/GCA_002260175.1_ASM226017v1	28760895	UCL720
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.75406	52	-	CJBD01	56	4918	4556	3/21/15	2/27/17	Scaffold	SC	SAMEA2151226	GCA_001109605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/605/GCA_001109605.1_10492_1_82	-	MDUST408
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	4.776	50.8	-	NWBB01	45	4953	4685	9/20/17	9/22/17	Contig	USDA	SAMN07488842	GCA_002319735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/735/GCA_002319735.1_ASM231973v1	-	C056
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.03691	39.6	-	CHAH01	142	2217	1995	4/21/15	3/11/17	Scaffold	SC	SAMEA1029386	GCA_001347875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/875/GCA_001347875.1_7038_6_7	-	SMRU2983
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.10274	39.5	-	CFHT01	50	2308	2063	3/15/15	3/11/17	Scaffold	SC	SAMEA1029393	GCA_001347915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/915/GCA_001347915.1_7068_4_9	-	SMRU3129
Escherichia coli	562	PRJNA383591	383591	Proteobacteria	Gammaproteobacteria	5.2035	50.6	-	NWBD01	126	5653	5280	9/20/17	9/22/17	Contig	USDA	SAMN07488840	GCA_002319745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/319/745/GCA_002319745.1_ASM231974v1	-	C019
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72113	52	-	CIZR01	53	4874	4515	3/21/15	2/27/17	Scaffold	SC	SAMEA2158376	GCA_001109625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/625/GCA_001109625.1_10492_1_42	-	MDUST243
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.87574	32.8	-	MJHY01	175	3018	2858	8/18/17	8/21/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN05721749	GCA_002260185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/185/GCA_002260185.1_ASM226018v1	28760895	UG875
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.82221	32.8	-	MIHQ01	215	2889	2758	8/18/17	8/21/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN05721750	GCA_002260225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/225/GCA_002260225.1_ASM226022v1	28760895	UG982
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82765	52	-	CIWO01	38	5014	4650	3/21/15	2/27/17	Scaffold	SC	SAMEA2072897	GCA_001109745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/745/GCA_001109745.1_10349_1_23	-	ERL062282
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.10505	50.4	-	NTDI01	99	5235	4933	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN04942832	GCA_002324045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/045/GCA_002324045.1_ASM232404v1	-	KCJK9
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09711	39.6	-	CHAA01	67	2338	2098	4/21/15	3/11/17	Scaffold	SC	SAMEA1029398	GCA_001347935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/935/GCA_001347935.1_7004_8_77	-	SMRU2909
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11017	39.5	-	CHVX01	62	2341	2089	4/21/15	3/11/17	Scaffold	SC	SAMEA1029406	GCA_001347975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/975/GCA_001347975.1_7004_7_58	-	SMRU2890
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.02735	50.8	-	NTDJ01	108	5234	4935	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN04942834	GCA_002324075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/075/GCA_002324075.1_ASM232407v1	-	KCJK326
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73041	52	-	CIWH01	42	4895	4546	3/21/15	2/27/17	Scaffold	SC	SAMEA2072895	GCA_001109985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/985/GCA_001109985.1_10349_1_17	-	ERL041932
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.89291	32.8	-	MJIA01	386	3056	2835	8/18/17	8/21/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN05721752	GCA_002260245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/245/GCA_002260245.1_ASM226024v1	28760895	UP106
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.87783	32.8	-	MIHO01	291	3026	2851	8/18/17	8/21/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN05721754	GCA_002260265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/265/GCA_002260265.1_ASM226026v1	28760895	UP1073
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72809	52	-	CJOY01	44	4896	4540	3/21/15	2/27/17	Scaffold	SC	SAMEA1572796	GCA_001110185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/185/GCA_001110185.1_8447_8_3	-	MDUST75
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.03055	50.8	-	NTDA01	101	5229	4931	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN04942836	GCA_002324095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/095/GCA_002324095.1_ASM232409v1	-	KCJK328
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.06257	39.5	-	CHVZ01	60	2289	2047	4/21/15	3/11/17	Scaffold	SC	SAMEA1029421	GCA_001347995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/347/995/GCA_001347995.1_7054_5_13	-	SMRU3061
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.13048	39.3	-	CVKG01	58	2336	2103	4/2/15	3/11/17	Scaffold	SC	SAMEA1029424	GCA_001348015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/015/GCA_001348015.1_7054_5_11	-	SMRU3059
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.02717	50.8	-	NTDB01	95	5228	4932	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN04942837	GCA_002324105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/105/GCA_002324105.1_ASM232410v1	-	KCJK329
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70067	52.1	-	CJEQ01	57	4882	4512	3/21/15	2/27/17	Scaffold	SC	SAMEA2154393	GCA_001110445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/445/GCA_001110445.1_10541_2_48	-	MDUST334
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.87865	32.7	-	MIHN01	247	2979	2828	8/18/17	8/21/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN05721755	GCA_002260275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/275/GCA_002260275.1_ASM226027v1	28760895	UP109
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.84124	32.7	-	MIHM01	139	2983	2827	8/18/17	8/21/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN05721756	GCA_002260285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/285/GCA_002260285.1_ASM226028v1	28760895	UP703
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81233	52.1	-	CJKZ01	49	4981	4621	3/21/15	2/27/17	Scaffold	SC	SAMEA1930240	GCA_001110645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/645/GCA_001110645.1_10593_2_52	-	IPCQ
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.02516	50.8	-	NTCZ01	120	5237	4941	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN04942835	GCA_002324135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/135/GCA_002324135.1_ASM232413v1	-	KCJK327
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.14545	39.6	-	CIDA01	71	2371	2119	4/21/15	3/11/17	Scaffold	SC	SAMEA1029433	GCA_001348055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/055/GCA_001348055.1_7004_7_60	-	SMRU2892
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.11009	39.6	-	CFGK01	61	2310	2071	3/15/15	3/11/17	Scaffold	SC	SAMEA1029438	GCA_001348075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/075/GCA_001348075.1_6938_3_34	-	SMRU3159
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.02882	50.8	-	NTDC01	104	5239	4940	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN04942838	GCA_002324145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/145/GCA_002324145.1_ASM232414v1	-	KCJK330
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72328	52	-	CJAL01	65	4886	4517	3/21/15	2/27/17	Scaffold	SC	SAMEA2161308	GCA_001110685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/685/GCA_001110685.1_10492_1_62	-	MDUST335
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.88715	32.7	-	MIHL01	236	3064	2879	8/18/17	8/21/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN05721757	GCA_002260315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/315/GCA_002260315.1_ASM226031v1	28760895	UP954
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.89018	32.8	-	MIHT01	179	3048	2909	8/18/17	8/21/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN05721746	GCA_002260345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/345/GCA_002260345.1_ASM226034v1	28760895	UE220
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.78024	52.1	-	CJIJ01	81	4977	4617	3/21/15	2/27/17	Scaffold	SC	SAMEA2159588	GCA_001110925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/110/925/GCA_001110925.1_10562_2_86	-	MDUST419
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.9426	50.7	-	NTDE01	72	5017	4754	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN04942839	GCA_002324155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/155/GCA_002324155.1_ASM232415v1	-	KCJK500
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.09216	39.6	-	CHAP01	56	2312	2070	4/21/15	3/11/17	Scaffold	SC	SAMEA2061472	GCA_001348115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/115/GCA_001348115.1_9803_7_8	-	14
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.17205	39.5	-	CFHU01	63	2439	2191	3/15/15	3/11/17	Scaffold	SC	SAMEA2061473	GCA_001348135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/135/GCA_001348135.1_9803_7_10	-	23A
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.94157	50.7	-	NTDF01	69	5018	4758	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN04942840	GCA_002324175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/175/GCA_002324175.1_ASM232417v1	-	KCJK501
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73479	52	-	CJWT01	45	4902	4543	3/21/15	2/27/17	Scaffold	SC	SAMEA2057242	GCA_001111005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/005/GCA_001111005.1_9953_5_11	-	A277
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.85824	32.7	-	MIHS01	249	2970	2823	8/18/17	8/21/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN05721747	GCA_002260355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/355/GCA_002260355.1_ASM226035v1	28760895	UG1092
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.89158	32.7	-	MIHJ01	468	3047	2856	8/18/17	8/21/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN05721760	GCA_002260365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/365/GCA_002260365.1_ASM226036v1	28760895	UV695
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72042	52	-	CJFW01	58	4884	4513	3/21/15	2/27/17	Scaffold	SC	SAMEA2147207	GCA_001111085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/085/GCA_001111085.1_10561_2_52	-	H12ESR04835-001A
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.04294	50.5	-	NTDQ01	96	5259	4922	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05163875	GCA_002324215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/215/GCA_002324215.1_ASM232421v1	-	KCJK2722
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.12723	39.5	-	CHWE01	45	2357	2118	4/21/15	3/11/17	Scaffold	SC	SAMEA2061726	GCA_001348255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/255/GCA_001348255.1_9803_7_62	-	23F
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.14376	39.5	-	CFHG01	179	2353	2115	3/15/15	3/11/17	Scaffold	SC	SAMEA2061956	GCA_001348355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/355/GCA_001348355.1_9803_8_58	-	23F
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.93762	50.7	-	NTDO01	64	5006	4750	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05163870	GCA_002324225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/225/GCA_002324225.1_ASM232422v1	-	KCJK514
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73165	52	-	CJOS01	48	4900	4538	3/21/15	2/27/17	Scaffold	SC	SAMEA1572864	GCA_001111225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/225/GCA_001111225.1_8447_8_19	-	MDUST91
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.82621	32.8	-	MIHR01	350	2955	2789	8/18/17	8/21/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN05721748	GCA_002260385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/385/GCA_002260385.1_ASM226038v1	28760895	UG258
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.91144	32.8	-	MIHP01	253	3067	2884	8/18/17	8/21/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN05721753	GCA_002260425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/425/GCA_002260425.1_ASM226042v1	28760895	UP1072
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.80518	52	-	CJXH01	59	4986	4618	3/21/15	2/27/17	Scaffold	SC	SAMEA2057248	GCA_001111405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/405/GCA_001111405.1_9953_5_29	-	A350
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.93332	50.7	-	NTDU01	184	5251	4840	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05232922	GCA_002324235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/235/GCA_002324235.1_ASM232423v1	-	KCJK3893
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.06765	39.7	-	CHWF01	45	2321	2082	4/21/15	3/11/17	Scaffold	SC	SAMEA2062161	GCA_001348415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/415/GCA_001348415.1_9803_8_29	-	32F
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.1108	39.5	-	CFGS01	78	2333	2100	3/15/15	3/5/17	Scaffold	SC	SAMEA2062384	GCA_001348515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/515/GCA_001348515.1_9803_8_56	-	23F
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.91738	50.7	-	NTDW01	149	5225	4827	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05232925	GCA_002324245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/245/GCA_002324245.1_ASM232424v1	-	KCJK3910
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72269	52	-	CJQC01	46	4880	4530	3/21/15	2/27/17	Scaffold	SC	SAMEA1572840	GCA_001111425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/425/GCA_001111425.1_8490_5_9	-	MDUST9
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.87136	32.8	-	MIHK01	399	3031	2826	8/18/17	8/21/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN05721758	GCA_002260435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/435/GCA_002260435.1_ASM226043v1	28760895	UV1026
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.83414	32.8	-	MJHZ01	166	2954	2748	8/18/17	8/21/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN05721759	GCA_002260445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/445/GCA_002260445.1_ASM226044v1	28760895	UV1167
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72494	52	-	CJPK01	42	4879	4520	3/21/15	2/27/17	Scaffold	SC	SAMEA1572780	GCA_001111545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/545/GCA_001111545.1_8490_5_13	-	MDUST13
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.94245	50.6	-	NTDH01	56	5009	4747	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN04942841	GCA_002324295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/295/GCA_002324295.1_ASM232429v1	-	KCJK506
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.15475	39.4	-	CRCA01	108	2375	2142	3/22/15	3/13/17	Scaffold	SC	SAMEA1024934	GCA_001403815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/403/815/GCA_001403815.1_6731_2_1	-	SMRU1009
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.04346	39.7	-	CGWS01	53	2236	2024	4/21/15	3/12/17	Scaffold	SC	SAMEA1024880	GCA_001403835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/403/835/GCA_001403835.1_6731_2_22	-	SMRU1030
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.9394	50.7	-	NTDN01	70	5011	4751	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05163869	GCA_002324305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/305/GCA_002324305.1_ASM232430v1	-	KCJK513
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93429	51.8	-	CILU01	54	5138	4756	3/21/15	2/27/17	Scaffold	SC	SAMEA2055638	GCA_001111725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/725/GCA_001111725.1_9870_8_18	-	2003-008924
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.86078	32.6	-	MJHX01	179	3013	2854	8/18/17	8/21/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN05721751	GCA_002260455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/455/GCA_002260455.1_ASM226045v1	28760895	UMX773
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.81544	32.8	-	MIHI01	269	2903	2773	8/18/17	8/21/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN05721761	GCA_002260505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/260/505/GCA_002260505.1_ASM226050v1	28760895	UV699
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.76369	51.9	-	CEZQ01	53	4926	4566	3/10/15	2/27/17	Scaffold	SC	SAMEA2145153	GCA_001111865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/865/GCA_001111865.1_10493_1_27	-	MDUST175
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.93555	50.7	-	NTDR01	197	5241	4840	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05232919	GCA_002324335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/335/GCA_002324335.1_ASM232433v1	-	KCJK3864
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.21942	39.4	-	CQYO01	90	2454	2200	3/23/15	3/13/17	Scaffold	SC	SAMEA1025022	GCA_001403895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/403/895/GCA_001403895.1_6730_4_10	-	SMRU634
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.05978	39.7	-	CQYZ01	53	2252	2040	3/22/15	3/13/17	Scaffold	SC	SAMEA1025060	GCA_001403935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/403/935/GCA_001403935.1_6730_4_22	-	SMRU646
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.93159	50.7	-	NTDS01	188	5221	4834	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05232928	GCA_002324345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/345/GCA_002324345.1_ASM232434v1	-	KCJK3886
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.97904	52.1	-	CQHW01	62	5153	4881	3/22/15	2/27/17	Scaffold	SC	SAMEA1568505	GCA_001111905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/905/GCA_001111905.1_8490_2_68	-	CH25
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.90263	32.6	-	LGWV01	70	3049	2916	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940722	GCA_002267065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/065/GCA_002267065.1_ASM226706v1	28760895	UC51
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.81665	32.7	-	LGTV01	84	2933	2790	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940720	GCA_002267075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/075/GCA_002267075.1_ASM226707v1	28760895	UC16
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70094	52.1	-	CJYS01	42	4866	4512	3/21/15	2/27/17	Scaffold	SC	SAMEA2059369	GCA_001111965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/965/GCA_001111965.1_9953_5_76	-	LNT1480
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.93454	50.7	-	NTDT01	189	5237	4837	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05232927	GCA_002324355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/355/GCA_002324355.1_ASM232435v1	-	KCJK3889
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.14021	39.6	-	CQZA01	66	2355	2095	3/23/15	3/13/17	Scaffold	SC	SAMEA1024813	GCA_001403975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/403/975/GCA_001403975.1_6730_4_5	-	SMRU629
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.18214	39.5	-	CQYX01	84	2444	2204	3/23/15	3/13/17	Scaffold	SC	SAMEA1024825	GCA_001403995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/403/995/GCA_001403995.1_6730_4_19	-	SMRU643
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.93151	50.7	-	NTDV01	167	5231	4838	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05232923	GCA_002324365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/365/GCA_002324365.1_ASM232436v1	-	KCJK3909
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93147	51.8	-	CJLZ01	56	5125	4751	3/21/15	2/27/17	Scaffold	SC	SAMEA2153776	GCA_001112085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/085/GCA_001112085.1_10607_1_74	-	2011-017747
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.84278	32.6	-	LGXA01	49	2973	2854	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940727	GCA_002267105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/105/GCA_002267105.1_ASM226710v1	28760895	UC151
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.89756	32.8	-	LGWY01	108	3039	2888	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940725	GCA_002267125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/125/GCA_002267125.1_ASM226712v1	28760895	UP72
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72657	52.1	-	CJBE01	43	4890	4542	3/21/15	2/27/17	Scaffold	SC	SAMEA2159311	GCA_001112185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/185/GCA_001112185.1_10493_1_1	-	MDUST108
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.93487	50.7	-	NTDD01	105	5020	4754	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN04942847	GCA_002324415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/415/GCA_002324415.1_ASM232441v1	-	KCJK467
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.13863	39.7	-	CHRM01	76	2304	2015	4/21/15	3/13/17	Scaffold	SC	SAMEA1025081	GCA_001404015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/015/GCA_001404015.1_6731_2_12	-	SMRU1020
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.0472	39.6	-	CRCJ01	92	2262	2031	3/23/15	3/13/17	Scaffold	SC	SAMEA1024837	GCA_001404075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/075/GCA_001404075.1_6731_2_24	-	SMRU1032
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.93938	50.7	-	NTDG01	53	5007	4745	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05163865	GCA_002324425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/425/GCA_002324425.1_ASM232442v1	-	KCJK502
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72153	52	-	CJBZ01	50	4874	4515	3/21/15	2/27/17	Scaffold	SC	SAMEA2142777	GCA_001112465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/465/GCA_001112465.1_10493_1_46	-	MDUST244
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.79554	32.7	-	LGWW01	45	2911	2754	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940723	GCA_002267135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/135/GCA_002267135.1_ASM226713v1	28760895	UC54
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.90145	32.8	-	LGWZ01	98	3036	2889	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940726	GCA_002267145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/145/GCA_002267145.1_ASM226714v1	28760895	UP81
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.96104	51.8	-	CJGU01	82	5182	4718	3/21/15	2/27/17	Scaffold	SC	SAMEA2151041	GCA_001112705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/705/GCA_001112705.1_10562_2_28	-	MDUST233
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.94106	50.6	-	NTDM01	55	5007	4743	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05163868	GCA_002324435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/435/GCA_002324435.1_ASM232443v1	-	KCJK512
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.0793	39.7	-	CRCF01	101	2247	2013	3/22/15	3/13/17	Scaffold	SC	SAMEA1024982	GCA_001404115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/115/GCA_001404115.1_6731_2_15	-	SMRU1023
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.16825	39.6	-	CRCE01	134	2413	2178	3/23/15	3/13/17	Scaffold	SC	SAMEA1025023	GCA_001404135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/135/GCA_001404135.1_6731_2_18	-	SMRU1026
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.03079	50.5	-	NTDP01	126	5254	4925	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05163873	GCA_002324465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/465/GCA_002324465.1_ASM232446v1	-	KCJK2721
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74713	52.1	-	CJSR01	49	4916	4547	3/21/15	2/27/17	Scaffold	SC	SAMEA1903864	GCA_001112965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/965/GCA_001112965.1_9475_6_35	-	1016605
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.844	32.7	-	LGXC01	44	2984	2856	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940729	GCA_002267155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/155/GCA_002267155.1_ASM226715v1	28760895	UV170
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.81744	32.7	-	LGXD01	53	2925	2815	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940730	GCA_002267205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/205/GCA_002267205.1_ASM226720v1	28760895	UE181
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70407	52.1	-	CJTT01	45	4863	4510	3/21/15	2/27/17	Scaffold	SC	SAMEA1903889	GCA_001113065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/065/GCA_001113065.1_9475_6_64	-	D50739
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.75376	50.8	-	NTEF01	104	4964	4630	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05363775	GCA_002324495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/495/GCA_002324495.1_ASM232449v1	-	KCJK4148
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.13782	39.5	-	CHPY01	72	2366	2130	4/21/15	3/13/17	Scaffold	SC	SAMEA1024955	GCA_001404175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/175/GCA_001404175.1_6730_4_16	-	SMRU640
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.0476	39.7	-	CQYT01	62	2217	1989	3/23/15	3/12/17	Scaffold	SC	SAMEA1024644	GCA_001404215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/215/GCA_001404215.1_6730_4_15	-	SMRU639
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.93547	50.7	-	NTDY01	163	5234	4833	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05232921	GCA_002324505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/505/GCA_002324505.1_ASM232450v1	-	KCJK3920
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70448	52.1	-	CJQO01	38	4852	4498	3/21/15	2/27/17	Scaffold	SC	SAMEA1572763	GCA_001113105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/105/GCA_001113105.1_8490_6_56	-	MDUST56
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.72058	32.7	-	LGXF01	61	2811	2664	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940732	GCA_002267215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/215/GCA_002267215.1_ASM226721v1	28760895	UE200
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.76776	32.7	-	LGXI01	105	2895	2717	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940735	GCA_002267225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/225/GCA_002267225.1_ASM226722v1	28760895	UE215
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72145	52	-	CJFA01	57	4871	4512	3/21/15	2/27/17	Scaffold	SC	SAMEA2155080	GCA_001113485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/485/GCA_001113485.1_10561_2_14	-	np75
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.91677	50.7	-	NTDX01	102	5133	4802	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05232920	GCA_002324525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/525/GCA_002324525.1_ASM232452v1	-	KCJK3915
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.07128	39.4	-	CQYU01	66	2307	2074	3/23/15	3/12/17	Scaffold	SC	SAMEA1024904	GCA_001404255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/255/GCA_001404255.1_6730_4_20	-	SMRU644
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.12459	39.8	-	CHQY01	129	2314	2082	4/21/15	3/12/17	Scaffold	SC	SAMEA1024667	GCA_001404275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/275/GCA_001404275.1_6731_2_20	-	SMRU1028
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.42717	50.2	-	NTDZ01	187	5715	5293	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05232930	GCA_002324535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/535/GCA_002324535.1_ASM232453v1	-	KCJK3945
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72432	52	-	CJQB01	42	4886	4531	3/21/15	2/27/17	Scaffold	SC	SAMEA1572832	GCA_001113525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/525/GCA_001113525.1_8490_5_8	-	MDUST8
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.86161	32.7	-	LGXJ01	55	3001	2888	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940736	GCA_002267265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/265/GCA_002267265.1_ASM226726v1	28760895	UE232
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.81978	32.6	-	LGXM01	54	2933	2811	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940739	GCA_002267285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/285/GCA_002267285.1_ASM226728v1	28760895	UC311
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73557	52	-	CIYH01	58	4915	4528	3/21/15	2/27/17	Scaffold	SC	SAMEA2072790	GCA_001113605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/605/GCA_001113605.1_10349_1_76	-	ERL12590
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.75721	50.8	-	NTEA01	116	4966	4636	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05363770	GCA_002324575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/575/GCA_002324575.1_ASM232457v1	-	KCJK4127
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	1.99181	39.8	-	CHVF01	60	2181	1954	4/21/15	3/5/17	Scaffold	SC	SAMEA1025872	GCA_001566135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/135/GCA_001566135.1_6899_4_22	-	SMRU2038
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.14312	39.7	-	LJVL01	128	2293	2007	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964620	GCA_001581135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/135/GCA_001581135.1_ASM158113v1	-	NTPn 2
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.75657	50.8	-	NTEB01	107	4963	4634	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05363771	GCA_002324595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/595/GCA_002324595.1_ASM232459v1	-	KCJK4137
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73095	52.1	-	CIZM01	58	4923	4548	3/21/15	2/27/17	Scaffold	SC	SAMEA2156285	GCA_001113925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/925/GCA_001113925.1_10492_1_37	-	MDUST234
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.75041	32.6	-	LGXO01	38	2848	2694	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940741	GCA_002267295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/295/GCA_002267295.1_ASM226729v1	28760895	UC330
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.85973	32.8	-	LGWM01	78	2971	2837	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940744	GCA_002267325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/325/GCA_002267325.1_ASM226732v1	28760895	UCL378
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72135	52	-	CJGK01	52	4876	4511	3/21/15	2/27/17	Scaffold	SC	SAMEA2146098	GCA_001114365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/365/GCA_001114365.1_10562_2_16	-	MDUST172
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.74578	50.9	-	NTEC01	168	4960	4634	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05363772	GCA_002324605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/605/GCA_002324605.1_ASM232460v1	-	KCJK4139
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	1.98064	39.7	-	LJVJ01	103	2160	1953	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964619	GCA_001581145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/145/GCA_001581145.1_ASM158114v1	-	NTPn 1
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.11457	39.9	-	LJVM01	333	2309	1977	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964635	GCA_001581165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/165/GCA_001581165.1_ASM158116v1	-	NTPn 27
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.64386	50.9	-	NTED01	126	4892	4573	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05363773	GCA_002324625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/625/GCA_002324625.1_ASM232462v1	-	KCJK4140
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.6002	52.1	-	CJEP01	51	4731	4388	3/21/15	2/27/17	Scaffold	SC	SAMEA2151628	GCA_001114565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/565/GCA_001114565.1_10541_2_46	-	MDUST332
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.83794	32.6	-	LGWO01	51	2961	2841	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940746	GCA_002267345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/345/GCA_002267345.1_ASM226734v1	28760895	UE201
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.78161	32.6	-	LGWX01	50	2888	2771	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940724	GCA_002267365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/365/GCA_002267365.1_ASM226736v1	28760895	UC60
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73689	52	-	CJAB01	58	4895	4547	3/21/15	2/27/17	Scaffold	SC	SAMEA2151812	GCA_001114665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/665/GCA_001114665.1_10492_1_49	-	MDUST257
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.75621	50.8	-	NTEE01	112	4965	4634	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05363774	GCA_002324645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/645/GCA_002324645.1_ASM232464v1	-	KCJK4144
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	1.99453	39.8	-	LJVN01	109	2178	1954	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964621	GCA_001581215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/215/GCA_001581215.1_ASM158121v1	-	NTPn 3
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.08249	39.8	-	LJVO01	239	2318	2034	3/7/16	3/15/17	Scaffold	National Institute for Communicable Diseases	SAMN03964622	GCA_001581235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/235/GCA_001581235.1_ASM158123v1	-	NTPn 4
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.75079	50.8	-	NTEG01	130	4962	4626	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05363776	GCA_002324675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/675/GCA_002324675.1_ASM232467v1	-	KCJK4158
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.8057	52.1	-	CJYY01	43	4990	4619	3/21/15	2/27/17	Scaffold	SC	SAMEA2056538	GCA_001114745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/745/GCA_001114745.1_9953_5_84	-	LNT375
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.81246	32.7	-	LGXB01	60	2902	2771	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940728	GCA_002267385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/385/GCA_002267385.1_ASM226738v1	28760895	UV165
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.88944	32.7	-	LGXQ01	103	3039	2872	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940743	GCA_002267405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/405/GCA_002267405.1_ASM226740v1	28760895	UCL371
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72037	52	-	CJIO01	46	4867	4509	3/21/15	2/27/17	Scaffold	SC	SAMEA1929437	GCA_001114845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/845/GCA_001114845.1_10592_2_13	-	1382
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.75727	50.8	-	NTEJ01	107	4965	4635	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05363779	GCA_002324685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/685/GCA_002324685.1_ASM232468v1	-	KCJK4176
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.04012	39.6	-	LJVP01	118	2223	1976	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964623	GCA_001581245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/245/GCA_001581245.1_ASM158124v1	-	NTPn 5
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.20319	39.6	-	LJVR01	192	2507	2228	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964625	GCA_001581275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/275/GCA_001581275.1_ASM158127v1	-	NTPn 10
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.74443	50.9	-	NTEK01	160	4952	4623	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05363780	GCA_002324695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/695/GCA_002324695.1_ASM232469v1	-	KCJK4181
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73039	52.1	-	CJIL01	44	4900	4547	3/21/15	2/27/17	Scaffold	SC	SAMEA1929454	GCA_001114945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/945/GCA_001114945.1_10592_2_1	-	820
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.87341	32.7	-	LGWP02	213	3009	2850	8/23/17	8/27/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940747	GCA_002267415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/415/GCA_002267415.2_ASM226741v2	28760895	UCL401
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.90491	32.7	-	LGXE01	92	3069	2932	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940731	GCA_002267425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/425/GCA_002267425.1_ASM226742v1	28760895	UV185
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74854	52.1	-	CJTL01	47	4923	4560	3/21/15	2/27/17	Scaffold	SC	SAMEA1903891	GCA_001115025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/025/GCA_001115025.1_9475_6_63	-	1032249
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.74259	50.7	-	NTEN01	131	4933	4601	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05363782	GCA_002324725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/725/GCA_002324725.1_ASM232472v1	-	KCJK4726
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.01774	39.8	-	LJVT01	145	2225	2005	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964627	GCA_001581295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/295/GCA_001581295.1_ASM158129v1	-	NTPn 12
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.01965	40.2	-	LJVU01	488	2268	1981	3/7/16	3/5/17	Scaffold	National Institute for Communicable Diseases	SAMN03964628	GCA_001581305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/305/GCA_001581305.1_ASM158130v1	-	NTPn 13
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.75767	50.8	-	NTEH01	107	4956	4629	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05363777	GCA_002324755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/755/GCA_002324755.1_ASM232475v1	-	KCJK4162
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.722	52	-	CEXR01	56	4890	4515	3/13/15	2/27/17	Scaffold	SC	SAMEA2142511	GCA_001115685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/685/GCA_001115685.1_10561_2_15	-	np97
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.83005	32.7	-	LGXG01	54	2945	2834	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940733	GCA_002267445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/445/GCA_002267445.1_ASM226744v1	28760895	UE203
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.81808	32.7	-	LGXH01	42	2942	2824	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940734	GCA_002267485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/485/GCA_002267485.1_ASM226748v1	28760895	UE206
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71009	52.1	-	CJXF01	53	4870	4520	3/21/15	2/27/17	Scaffold	SC	SAMEA2059216	GCA_001115785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/785/GCA_001115785.1_9953_5_31	-	A354
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.75674	50.8	-	NTEI01	119	4964	4633	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05363778	GCA_002324765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/765/GCA_002324765.1_ASM232476v1	-	KCJK4166
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.11839	39.5	-	LJVV01	260	2336	2038	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964629	GCA_001581325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/325/GCA_001581325.1_ASM158132v1	-	NTPn 14
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.09691	39.7	-	LJVW01	216	2310	2056	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964630	GCA_001581355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/355/GCA_001581355.1_ASM158135v1	-	NTPn 15
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.74787	50.8	-	NTEL01	141	4949	4623	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05408390	GCA_002324775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/775/GCA_002324775.1_ASM232477v1	-	KCJK4201
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82409	52	-	CIWQ01	42	5012	4657	3/21/15	2/27/17	Scaffold	SC	SAMEA2072898	GCA_001116145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/145/GCA_001116145.1_10349_1_26	-	ERL064553
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.81119	32.7	-	LGXK01	51	2911	2783	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940737	GCA_002267495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/495/GCA_002267495.1_ASM226749v1	28760895	UG268
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.82907	32.7	-	LGXN01	60	2955	2829	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940740	GCA_002267525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/525/GCA_002267525.1_ASM226752v1	28760895	UC313
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72046	52	-	CJAH01	54	4875	4517	3/21/15	2/27/17	Scaffold	SC	SAMEA2147345	GCA_001116225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/225/GCA_001116225.1_10492_1_59	-	MDUST319
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.78182	50.6	-	NTEM01	138	4977	4631	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05363781	GCA_002324805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/805/GCA_002324805.1_ASM232480v1	-	KCJK4405
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.16748	39.7	-	LJVX01	154	2329	2028	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964631	GCA_001581375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/375/GCA_001581375.1_ASM158137v1	-	NTPn 16
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.02549	39.8	-	LJVY01	116	2254	1994	3/7/16	3/6/17	Scaffold	National Institute for Communicable Diseases	SAMN03964632	GCA_001581395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/395/GCA_001581395.1_ASM158139v1	-	NTPn 17
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.73489	50.7	-	NTEP01	132	4928	4596	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05363784	GCA_002324835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/835/GCA_002324835.1_ASM232483v1	-	KCJK4729
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71945	52	-	CJBU01	40	4890	4523	3/21/15	2/27/17	Scaffold	SC	SAMEA2158229	GCA_001116565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/565/GCA_001116565.1_10493_1_4	-	MDUST116
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.84925	32.7	-	LGXL01	54	2957	2827	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940738	GCA_002267535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/535/GCA_002267535.1_ASM226753v1	28760895	UC279
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.8423	32.6	-	LGXP01	53	2967	2849	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940742	GCA_002267565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/565/GCA_002267565.1_ASM226756v1	28760895	UC334
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72527	52	-	CJQF01	45	4880	4526	3/21/15	2/27/17	Scaffold	SC	SAMEA1572773	GCA_001116685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/685/GCA_001116685.1_8490_6_40	-	MDUST40
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.00982	50.6	-	NTEO01	197	5341	4998	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05363783	GCA_002324845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/324/845/GCA_002324845.1_ASM232484v1	-	KCJK4727
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.0017	39.9	-	LJVZ01	190	2221	1964	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964633	GCA_001581405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/405/GCA_001581405.1_ASM158140v1	-	NTPn 18
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.03113	39.7	-	LJWA01	199	2263	2009	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964634	GCA_001581425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/425/GCA_001581425.1_ASM158142v1	-	NTPn 20
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.88364	50.5	-	NTER01	110	4986	4750	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05408391	GCA_002326755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/755/GCA_002326755.1_ASM232675v1	-	KCJK4934
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	5.00283	52.1	-	CQGW01	59	5208	4911	3/22/15	2/27/17	Scaffold	SC	SAMEA1568486	GCA_001116925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/116/925/GCA_001116925.1_8490_2_62	-	CH19
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.88122	32.7	-	LGWN01	71	3031	2904	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940745	GCA_002267575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/575/GCA_002267575.1_ASM226757v1	28760895	UC325
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.84113	32.7	-	LGWQ02	99	2968	2814	8/23/17	8/27/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940748	GCA_002267605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/605/GCA_002267605.2_ASM226760v2	28760895	UCL437
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7237	52	-	CJPB01	43	4883	4536	3/21/15	2/27/17	Scaffold	SC	SAMEA1572797	GCA_001117225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/225/GCA_001117225.1_8447_8_32	-	MDUST104
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.4059	50.6	-	NTEU01	219	5776	5422	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05410085	GCA_002326765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/765/GCA_002326765.1_ASM232676v1	-	KCJK5106
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	1.92634	39.9	-	LJWB01	261	2139	1886	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964636	GCA_001581455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/455/GCA_001581455.1_ASM158145v1	-	NTPn 28
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.1169	39.6	-	LJVQ01	151	2351	2094	3/7/16	3/5/17	Scaffold	National Institute for Communicable Diseases	SAMN03964624	GCA_001581475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/475/GCA_001581475.1_ASM158147v1	-	NTPn 6
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.70477	50.7	-	NTEW01	126	4919	4583	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05409592	GCA_002326795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/795/GCA_002326795.1_ASM232679v1	-	KCJK5139
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.88877	52	-	CJGO01	73	5119	4733	3/21/15	2/27/17	Scaffold	SC	SAMEA2152611	GCA_001117285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/285/GCA_001117285.1_10562_2_22	-	MDUST195
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.90449	32.8	-	LGWS01	102	3037	2883	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940750	GCA_002267625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/625/GCA_002267625.1_ASM226762v1	28760895	UB563
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.85431	32.7	-	LGWU01	101	2990	2839	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940752	GCA_002267645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/645/GCA_002267645.1_ASM226764v1	28760895	UB590
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72119	52	-	CJFP01	59	4876	4506	3/21/15	2/27/17	Scaffold	SC	SAMEA2149211	GCA_001117365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/365/GCA_001117365.1_10561_2_38	-	np51
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.7084	50.7	-	NTEX01	123	4927	4553	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05409600	GCA_002326825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/825/GCA_002326825.1_ASM232682v1	-	KCJK5142
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.01381	39.8	-	LJVS01	177	2232	1970	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964626	GCA_001581485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/485/GCA_001581485.1_ASM158148v1	-	NTPn 11
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.08747	39.7	-	LJWC01	213	2315	2050	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964637	GCA_001581515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/515/GCA_001581515.1_ASM158151v1	-	NTPn 29
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.41793	50.4	-	NTFA01	198	5871	5491	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05409583	GCA_002326835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/835/GCA_002326835.1_ASM232683v1	-	KCJK5146
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.75408	52	-	CIZW01	51	4927	4551	3/21/15	2/27/17	Scaffold	SC	SAMEA2150856	GCA_001117465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/465/GCA_001117465.1_10492_1_43	-	MDUST248
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.84255	32.7	-	LGWD01	55	2954	2830	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940754	GCA_002267665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/665/GCA_002267665.1_ASM226766v1	28760895	UB605
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.85235	32.7	-	LGWR01	64	2957	2833	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940749	GCA_002267685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/685/GCA_002267685.1_ASM226768v1	28760895	UB512
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93251	51.8	-	CJVX01	70	5130	4739	3/21/15	2/27/17	Scaffold	SC	SAMEA2056659	GCA_001117485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/485/GCA_001117485.1_9870_8_68	-	BC2011-1612
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.01241	50.6	-	NTEQ01	224	5350	5003	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05363785	GCA_002326865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/865/GCA_002326865.1_ASM232686v1	-	KCJK4744
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.14007	39.7	-	LJWD01	175	2377	2081	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964638	GCA_001581535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/535/GCA_001581535.1_ASM158153v1	-	NTPn 30
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.09722	39.7	-	LJWE01	234	2310	2039	3/7/16	3/15/17	Scaffold	National Institute for Communicable Diseases	SAMN03964639	GCA_001581545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/545/GCA_001581545.1_ASM158154v1	-	NTPn 31
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.74452	50.8	-	NTET01	119	4984	4634	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05410045	GCA_002326875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/875/GCA_002326875.1_ASM232687v1	-	KCJK4937
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71835	52	-	CIYS01	38	4872	4518	3/21/15	2/27/17	Scaffold	SC	SAMEA2072675	GCA_001117925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/925/GCA_001117925.1_10349_1_9	-	ERL032200
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.84977	32.7	-	LGWT01	52	2954	2835	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940751	GCA_002267695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/695/GCA_002267695.1_ASM226769v1	28760895	UB572
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.76887	32.7	-	LGWC01	56	2858	2725	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940753	GCA_002267705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/705/GCA_002267705.1_ASM226770v1	28760895	UB594
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.68601	52.1	-	CJHU01	56	4847	4491	3/21/15	2/27/17	Scaffold	SC	SAMEA2162794	GCA_001117985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/985/GCA_001117985.1_10562_2_63	-	MDUST373
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.38521	50.7	-	NTFB01	317	5798	5450	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05410130	GCA_002326895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/895/GCA_002326895.1_ASM232689v1	-	KCJK5148
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.08741	39.6	-	LJWF01	195	2313	2043	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964640	GCA_001581555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/555/GCA_001581555.1_ASM158155v1	-	NTPn 32
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	1.97633	39.8	-	LJWH01	159	2156	1910	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964641	GCA_001581585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/585/GCA_001581585.1_ASM158158v1	-	NTPn 33
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.704	50.7	-	NTFF01	107	4908	4560	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05410110	GCA_002326915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/915/GCA_002326915.1_ASM232691v1	-	KCJK5395
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73535	52	-	CIZE01	48	4898	4541	3/21/15	2/27/17	Scaffold	SC	SAMEA2148118	GCA_001118125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/125/GCA_001118125.1_10492_1_2	-	MDUST115
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.85914	32.8	-	LGWE01	145	2945	2824	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940755	GCA_002267745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/745/GCA_002267745.1_ASM226774v1	28760895	UC623
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.84011	32.7	-	LGWI01	56	2942	2811	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940759	GCA_002267765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/765/GCA_002267765.1_ASM226776v1	28760895	UMX777
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2770	204451	Proteobacteria	Gammaproteobacteria	4.75214	52	-	CJRU01	42	4914	4553	3/21/15	2/27/17	Scaffold	SC	SAMEA1687846	GCA_001118165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/165/GCA_001118165.1_8616_4_45	-	BCR110
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.39939	50.5	-	NTEZ01	307	5867	5490	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05410142	GCA_002326945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/945/GCA_002326945.1_ASM232694v1	-	KCJK5144
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.03409	39.8	-	LJWJ01	216	2215	1963	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964644	GCA_001581615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/615/GCA_001581615.1_ASM158161v1	-	NTPn 38
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.12722	39.8	-	LJWK01	288	2306	1991	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964645	GCA_001581635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/635/GCA_001581635.1_ASM158163v1	-	NTPn 39
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.01169	50.8	-	NTES01	101	5183	4894	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05410075	GCA_002326955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/955/GCA_002326955.1_ASM232695v1	-	KCJK4935
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74275	52.1	-	CJMN01	49	4909	4541	3/21/15	2/27/17	Scaffold	SC	SAMEA2148358	GCA_001118425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/425/GCA_001118425.1_10607_2_2	-	BKQ4CF
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.84209	32.6	-	LGWF01	94	2986	2841	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940756	GCA_002267775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/775/GCA_002267775.1_ASM226777v1	28760895	UMX750
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.71947	32.7	-	LGWK01	50	2802	2657	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940761	GCA_002267785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/785/GCA_002267785.1_ASM226778v1	28760895	UA813
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72304	52	-	CIZT01	53	4890	4514	3/21/15	2/27/17	Scaffold	SC	SAMEA2162496	GCA_001118665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/665/GCA_001118665.1_10492_1_41	-	MDUST242
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	4.73004	50.8	-	NTEY01	143	4953	4592	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05409604	GCA_002326965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/965/GCA_002326965.1_ASM232696v1	-	KCJK5143
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.09931	39.5	-	LJWL01	185	2308	2057	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964646	GCA_001581645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/645/GCA_001581645.1_ASM158164v1	-	NTPn 40
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.11381	39.6	-	LJWM01	146	2348	2058	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964647	GCA_001581665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/665/GCA_001581665.1_ASM158166v1	-	NTPn 42
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.40295	50.6	-	NTEV01	207	5775	5419	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05410056	GCA_002326995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/326/995/GCA_002326995.1_ASM232699v1	-	KCJK5108
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72341	52	-	CJFZ01	54	4888	4516	3/21/15	2/27/17	Scaffold	SC	SAMEA2159383	GCA_001118745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/745/GCA_001118745.1_10561_2_55	-	ERL09896
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.81551	32.7	-	LGXS01	185	2943	2799	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940764	GCA_002267825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/825/GCA_002267825.1_ASM226782v1	28760895	UC916
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.77758	32.7	-	LGXX01	56	2857	2685	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940769	GCA_002267845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/845/GCA_002267845.1_ASM226784v1	28760895	UA939
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73782	52	-	CJWW01	49	4894	4541	3/21/15	2/27/17	Scaffold	SC	SAMEA2059211	GCA_001118805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/805/GCA_001118805.1_9953_5_16	-	A283
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.3862	50.6	-	NTFC01	277	5808	5461	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05410099	GCA_002327025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/025/GCA_002327025.1_ASM232702v1	-	KCJK5158
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.12485	39.8	-	LJWO01	245	2302	1992	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964649	GCA_001581695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/695/GCA_001581695.1_ASM158169v1	-	NTPn 44
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.13592	39.7	-	LJWP01	101	2285	1979	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964651	GCA_001581715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/715/GCA_001581715.1_ASM158171v1	-	NTPn 46
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.38521	50.7	-	NTFD01	317	5798	5450	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05410121	GCA_002327035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/035/GCA_002327035.1_ASM232703v1	-	KCJK5161
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73644	52	-	CJEB01	58	4909	4549	3/21/15	2/27/17	Scaffold	SC	SAMEA2162641	GCA_001118905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/905/GCA_001118905.1_10541_2_30	-	MDUST304
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.79811	32.7	-	LGXY01	87	2893	2771	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940770	GCA_002267855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/855/GCA_002267855.1_ASM226785v1	28760895	UG944
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.85266	32.7	-	LGVX01	60	2962	2831	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940771	GCA_002267865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/865/GCA_002267865.1_ASM226786v1	28760895	UG993
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71977	52	-	CIXB01	55	4888	4516	3/21/15	2/27/17	Scaffold	SC	SAMEA2072900	GCA_001118965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/965/GCA_001118965.1_10349_1_32	-	ERL07434
Escherichia coli	562	PRJNA298331	298331	Proteobacteria	Gammaproteobacteria	5.39662	50.6	-	NTFE01	224	5775	5422	9/21/17	9/23/17	Contig	US Food and Drug Administration	SAMN05410092	GCA_002327045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/327/045/GCA_002327045.1_ASM232704v1	-	KCJK5162
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.1406	39.8	-	LJWQ01	246	2293	1992	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964652	GCA_001581735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/735/GCA_001581735.1_ASM158173v1	-	NTPn 47
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.0811	39.6	-	LJWR01	146	2284	2038	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964653	GCA_001581745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/745/GCA_001581745.1_ASM158174v1	-	NTPn 48
Escherichia coli	562	PRJNA319494	319494	Proteobacteria	Gammaproteobacteria	5.19133	50.6	-	NWQU01	145	5569	5184	9/25/17	9/25/17	Contig	Canadian Food Inspection Agency	SAMN04900931	GCA_002353035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/035/GCA_002353035.1_ASM235303v1	28221970	OLC1478
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72566	52	-	CJSH01	45	4890	4528	3/21/15	2/27/17	Scaffold	SC	SAMEA1903843	GCA_001119125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/125/GCA_001119125.1_9475_6_18	-	1013305
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.83744	32.6	-	LGVY01	56	2961	2840	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940772	GCA_002267905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/905/GCA_002267905.1_ASM226790v1	28760895	UC1001
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.75999	32.6	-	LGWA01	38	2842	2724	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940774	GCA_002267925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/925/GCA_002267925.1_ASM226792v1	28760895	UV1151
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.85271	52	-	CJCW01	58	5054	4659	3/21/15	2/27/17	Scaffold	SC	SAMEA2162320	GCA_001119225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/225/GCA_001119225.1_10493_1_81	-	MDUST388
Escherichia coli	562	PRJNA319494	319494	Proteobacteria	Gammaproteobacteria	4.95909	50.4	-	NWRB01	246	5237	4901	9/25/17	9/25/17	Contig	Canadian Food Inspection Agency	SAMN04900924	GCA_002353075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/353/075/GCA_002353075.1_ASM235307v1	28221970	OLC0682
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.14887	39.7	-	LJWT01	164	2303	1980	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964655	GCA_001581775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/775/GCA_001581775.1_ASM158177v1	-	NTPn 50
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.00902	39.9	-	LJWG01	217	2198	1957	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964642	GCA_001581795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/795/GCA_001581795.1_ASM158179v1	-	NTPn 34
Escherichia coli	562	PRJNA406824	406824	Proteobacteria	Gammaproteobacteria	5.42171	50.4	-	NTMD01	777	5836	5496	9/25/17	9/25/17	Contig	UR12SP37 Laboratoire de Microbiologie Sahloul	SAMN07630250	GCA_002358075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/358/075/GCA_002358075.1_ASM235807v1	28472479	KPC-Tunisia
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.86076	51.9	-	CIWL01	44	5071	4699	3/21/15	2/27/17	Scaffold	SC	SAMEA2072678	GCA_001119485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/485/GCA_001119485.1_10349_1_18	-	ERL042857
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.87673	32.7	-	LGWB01	93	3012	2857	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940775	GCA_002267935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/935/GCA_002267935.1_ASM226793v1	28760895	UV1155
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.83208	32.7	-	LGYL01	84	2946	2808	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03944932	GCA_002267965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/965/GCA_002267965.1_ASM226796v1	28760895	UB670
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.78048	52.1	-	CJFE01	73	4982	4604	3/21/15	2/27/17	Scaffold	SC	SAMEA2143482	GCA_001119685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/685/GCA_001119685.1_10561_2_20	-	np99
Escherichia coli	562	PRJNA401000	401000	Proteobacteria	Gammaproteobacteria	4.96023	50.6	-	NWVM01	130	5219	4885	9/27/17	9/27/17	Contig	USDA/ARS/WRRC/PSM	SAMN07679725	GCA_002379205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/205/GCA_002379205.1_ASM237920v1	-	RM10940
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.06797	39.8	-	LJWN01	296	2294	2018	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964648	GCA_001581805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/805/GCA_001581805.1_ASM158180v1	-	NTPn 43
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	1.97732	39.7	-	LJWI01	125	2168	1944	3/7/16	3/12/17	Scaffold	National Institute for Communicable Diseases	SAMN03964643	GCA_001581825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/825/GCA_001581825.1_ASM158182v1	-	NTPn 36
Escherichia coli	562	PRJNA401000	401000	Proteobacteria	Gammaproteobacteria	5.28072	50.5	-	NWVP01	278	5778	5414	9/27/17	9/27/17	Contig	USDA/ARS/WRRC/PSM	SAMN07679722	GCA_002379215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/215/GCA_002379215.1_ASM237921v1	-	RM9244
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7359	52	-	CJAP01	60	4890	4533	3/21/15	2/27/17	Scaffold	SC	SAMEA2154661	GCA_001119705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/705/GCA_001119705.1_10492_1_68	-	MDUST363
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.85534	32.6	-	LGWH01	54	2981	2859	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940758	GCA_002267985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/985/GCA_002267985.1_ASM226798v1	28760895	UMX772
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.82353	32.7	-	LGYK01	333	2933	2778	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03944931	GCA_002267995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/267/995/GCA_002267995.1_ASM226799v1	28760895	UB662
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74727	52.1	-	CJSM01	51	4908	4541	3/21/15	2/27/17	Scaffold	SC	SAMEA1903852	GCA_001119745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/745/GCA_001119745.1_9475_6_26	-	1012911
Escherichia coli	562	PRJNA401000	401000	Proteobacteria	Gammaproteobacteria	5.03632	50.7	-	NWVQ01	201	5377	5025	9/27/17	9/27/17	Contig	USDA/ARS/WRRC/PSM	SAMN07679721	GCA_002379235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/235/GCA_002379235.1_ASM237923v1	-	RM7807
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.00805	39.7	-	LJLS01	69	2210	1992	3/10/16	3/12/17	Scaffold	University of Toronto	SAMN03946391	GCA_001585325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/325/GCA_001585325.1_ASM158532v1	-	MT39
Streptococcus pneumoniae	1313	PRJNA291603	291603	Terrabacteria group	Firmicutes	2.01905	39.7	-	LJLY01	75	2217	2017	3/10/16	3/12/17	Scaffold	University of Toronto	SAMN03946401	GCA_001585485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/585/485/GCA_001585485.1_ASM158548v1	-	CLG10
Escherichia coli	562	PRJNA401000	401000	Proteobacteria	Gammaproteobacteria	5.02701	50.7	-	NWVS01	178	5347	5008	9/27/17	9/27/17	Contig	USDA/ARS/WRRC/PSM	SAMN07679719	GCA_002379285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/285/GCA_002379285.1_ASM237928v1	-	RM7788
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.96739	52.1	-	CQHV01	50	5144	4870	3/23/15	2/27/17	Scaffold	SC	SAMEA1568480	GCA_001119985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/119/985/GCA_001119985.1_8490_2_89	-	CH46
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.80409	32.7	-	LGWG01	59	2899	2762	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940757	GCA_002268005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/005/GCA_002268005.1_ASM226800v1	28760895	UMX753
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.92015	32.8	-	LGWJ01	150	3075	2903	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940760	GCA_002268035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/035/GCA_002268035.1_ASM226803v1	28760895	UP788
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.98271	52.1	-	CQGU01	48	5159	4888	3/23/15	2/27/17	Scaffold	SC	SAMEA1568504	GCA_001120065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/065/GCA_001120065.1_8490_2_59	-	CH16
Escherichia coli	562	PRJNA401000	401000	Proteobacteria	Gammaproteobacteria	5.28389	50.5	-	NWVN01	293	5802	5437	9/27/17	9/27/17	Contig	USDA/ARS/WRRC/PSM	SAMN07679724	GCA_002379295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/295/GCA_002379295.1_ASM237929v1	-	RM9246
Streptococcus pneumoniae	1313	PRJNA302716	302716	Terrabacteria group	Firmicutes	2.17069	39.5	-	LQQH01	86	2393	2175	5/5/16	3/13/17	Scaffold	TAILORED-Treatment project	SAMN04387660	GCA_001637385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/385/GCA_001637385.1_ASM163738v1	-	CCUG 11780
Streptococcus pneumoniae	1313	PRJNA302716	302716	Terrabacteria group	Firmicutes	2.14903	39.7	-	LQQG01	88	2321	2093	5/5/16	3/13/17	Scaffold	TAILORED-Treatment project	SAMN04387653	GCA_001637405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/405/GCA_001637405.1_ASM163740v1	-	CCUG 1350
Escherichia coli	562	PRJNA401000	401000	Proteobacteria	Gammaproteobacteria	5.2847	50.5	-	NWVO01	309	5815	5451	9/27/17	9/27/17	Contig	USDA/ARS/WRRC/PSM	SAMN07679723	GCA_002379315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/315/GCA_002379315.1_ASM237931v1	-	RM9245
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73599	52	-	CJAJ01	56	4890	4544	3/21/15	2/27/17	Scaffold	SC	SAMEA2143056	GCA_001120405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/405/GCA_001120405.1_10492_1_61	-	MDUST328
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.79686	32.8	-	LGWL01	44	2905	2785	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940762	GCA_002268065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/065/GCA_002268065.1_ASM226806v1	28760895	UG834
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.80115	32.7	-	LGXR01	60	2901	2775	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940763	GCA_002268085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/085/GCA_002268085.1_ASM226808v1	28760895	UA913
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7091	52.1	-	CJDP01	55	4869	4518	3/21/15	2/27/17	Scaffold	SC	SAMEA2149555	GCA_001120625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/625/GCA_001120625.1_10541_2_19	-	MDUST219
Escherichia coli	562	PRJNA343363	343363	Proteobacteria	Gammaproteobacteria	5.39331	50.5	-	MJDI01	164	5396	5117	10/2/17	10/2/17	Contig	University of Hyderabad	SAMN05786429	GCA_002407285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/407/285/GCA_002407285.1_ASM240728v1	-	NA267
Streptococcus pneumoniae	1313	PRJNA302716	302716	Terrabacteria group	Firmicutes	2.1401	39.4	-	LQQI01	75	2297	2080	5/5/16	3/6/17	Scaffold	TAILORED-Treatment project	SAMN04387809	GCA_001637415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/415/GCA_001637415.1_ASM163741v1	-	CCUG 35272
Streptococcus pneumoniae	1313	PRJNA302716	302716	Terrabacteria group	Firmicutes	2.02085	39.6	-	LQQJ01	60	2205	1978	5/5/16	3/13/17	Scaffold	TAILORED-Treatment project	SAMN04387817	GCA_001637465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/465/GCA_001637465.1_ASM163746v1	-	CCUG 33774
Escherichia coli	562	PRJNA343358	343358	Proteobacteria	Gammaproteobacteria	5.32247	50.5	-	MKHD01	98	5250	5015	10/2/17	10/2/17	Contig	University of Hyderabad	SAMN05786386	GCA_002407295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/407/295/GCA_002407295.1_ASM240729v1	-	NA056
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.94016	51.8	-	CJVF01	58	5125	4747	3/21/15	2/27/17	Scaffold	SC	SAMEA2058423	GCA_001120645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/645/GCA_001120645.1_9870_8_43	-	2005-009945
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.77567	32.7	-	LGXT01	60	2853	2681	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940765	GCA_002268105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/105/GCA_002268105.1_ASM226810v1	28760895	UA923
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.80222	32.7	-	LGXU01	55	2907	2776	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940766	GCA_002268125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/125/GCA_002268125.1_ASM226812v1	28760895	UA925
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.97426	52.1	-	CQGP01	52	5145	4878	3/23/15	2/27/17	Scaffold	SC	SAMEA1568540	GCA_001120665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/665/GCA_001120665.1_8490_2_91	-	CH48
Escherichia coli	562	PRJNA343367	343367	Proteobacteria	Gammaproteobacteria	4.94886	50.8	-	MJDK01	122	4936	4696	10/2/17	10/2/17	Contig	University of Hyderabad	SAMN05786721	GCA_002407305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/407/305/GCA_002407305.1_ASM240730v1	-	NA635
Streptococcus pneumoniae	1313	PRJNA302716	302716	Terrabacteria group	Firmicutes	2.08573	39.7	-	LQQK01	95	2251	2031	5/5/16	3/13/17	Scaffold	TAILORED-Treatment project	SAMN04387839	GCA_001637485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/485/GCA_001637485.1_ASM163748v1	-	CCUG 35180
Streptococcus pneumoniae	1313	PRJNA302716	302716	Terrabacteria group	Firmicutes	2.08262	39.7	-	LWCD01	169	2269	2048	4/29/16	3/13/17	Scaffold	TAILORED-Treatment project	SAMN04623576	GCA_001639345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/345/GCA_001639345.1_ASM163934v1	-	CCUG 7206
Escherichia coli	562	PRJNA343365	343365	Proteobacteria	Gammaproteobacteria	5.27543	50.7	-	MJDJ01	81	5342	5112	10/2/17	10/2/17	Contig	University of Hyderabad	SAMN05786432	GCA_002407315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/407/315/GCA_002407315.1_ASM240731v1	-	NA633
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72327	52.1	-	CJJD01	43	4889	4541	3/21/15	2/27/17	Scaffold	SC	SAMEA1930156	GCA_001120845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/845/GCA_001120845.1_10592_2_35	-	E99-6646
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.763	32.7	-	LGXV01	53	2829	2659	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940767	GCA_002268135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/135/GCA_002268135.1_ASM226813v1	28760895	UA935
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.80506	32.7	-	LGXW01	66	2917	2790	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940768	GCA_002268145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/145/GCA_002268145.1_ASM226814v1	28760895	UA938
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.72965	52.1	-	CJNY01	118	4912	4536	3/21/15	2/27/17	Scaffold	SC	SAMEA1406328	GCA_001121005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/005/GCA_001121005.1_7468_7_56	-	IB5342
Escherichia coli	562	PRJNA343360	343360	Proteobacteria	Gammaproteobacteria	5.40032	50.5	-	MJGD01	162	5413	5128	10/2/17	10/2/17	Contig	University of Hyderabad	SAMN05791018	GCA_002407365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/407/365/GCA_002407365.1_ASM240736v1	-	NA259
Streptococcus pneumoniae	1313	PRJNA302716	302716	Terrabacteria group	Firmicutes	2.12738	39.5	-	LWKY01	59	2337	2112	5/12/16	3/13/17	Scaffold	TAILORED-Treatment project	SAMN04859023	GCA_001642845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/642/845/GCA_001642845.1_ASM164284v1	-	CCUG 63665
Streptococcus pneumoniae	1313	PRJNA302716	302716	Terrabacteria group	Firmicutes	2.00257	39.7	-	LSLM01	51	2196	1959	7/5/16	3/6/17	Scaffold	TAILORED-Treatment project	SAMN04481652	GCA_001678985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/678/985/GCA_001678985.1_ASM167898v1	-	CCUG 6798
Escherichia coli	562	PRJNA343378	343378	Proteobacteria	Gammaproteobacteria	5.32206	50.7	-	MJDL01	112	5415	5163	10/2/17	10/2/17	Contig	University of Hyderabad	SAMN05786722	GCA_002407375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/407/375/GCA_002407375.1_ASM240737v1	-	NA643
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74761	52	-	CJDF01	61	4937	4558	3/21/15	2/27/17	Scaffold	SC	SAMEA2158161	GCA_001121045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/045/GCA_001121045.1_10540_1_4	-	SGB114
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.87102	32.8	-	LGVZ01	134	3033	2856	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03940773	GCA_002268185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/185/GCA_002268185.1_ASM226818v1	28760895	UP1027
Staphylococcus aureus	1280	PRJNA291213	291213	Terrabacteria group	Firmicutes	2.74023	32.7	-	LGYJ01	76	2800	2677	8/23/17	8/25/17	Contig	Latin America Working Group on Bacterial Resistance	SAMN03944930	GCA_002268195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/195/GCA_002268195.1_ASM226819v1	28760895	UB599
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71937	52	-	CJEO01	51	4887	4509	3/21/15	2/27/17	Scaffold	SC	SAMEA2143806	GCA_001121125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/125/GCA_001121125.1_10541_2_5	-	MDUST155
Escherichia coli	562	PRJNA375730	375730	Proteobacteria	Gammaproteobacteria	5.37244	50.4	-	MVIO01	192	5814	5429	10/2/17	10/2/17	Contig	University of Hyderabad	SAMN06344514	GCA_002407385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/407/385/GCA_002407385.1_ASM240738v1	-	NA090
Streptococcus pneumoniae	1313	PRJNA302716	302716	Terrabacteria group	Firmicutes	2.0432	39.7	-	LQXF01	98	2199	1997	7/5/16	3/6/17	Scaffold	TAILORED-Treatment project	SAMN04407280	GCA_001679535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/535/GCA_001679535.1_ASM167953v1	-	CCUG 28588
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.15051	39.7	-	LWGT01	255	2408	2095	8/2/16	3/13/17	Scaffold	National Institute for Communicable Diseases	SAMN04337322	GCA_001697005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/005/GCA_001697005.1_ASM169700v1	-	22522
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72071	52	-	CJCH01	54	4877	4523	3/21/15	2/27/17	Scaffold	SC	SAMEA2157381	GCA_001121805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/805/GCA_001121805.1_10493_1_60	-	MDUST291
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78791	32.7	-	FFXV01	48	2857	2713	2/10/16	3/5/17	Contig	SC	SAMEA1464263	GCA_900017485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/485/GCA_900017485.1_7554_6_75	-	st303
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.90912	32.7	-	FFZS01	56	3070	2878	2/10/16	3/5/17	Contig	SC	SAMEA1464696	GCA_900017495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/495/GCA_900017495.1_7564_8_1	-	st500
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72221	52	-	CIZG01	51	4879	4515	3/21/15	2/27/17	Scaffold	SC	SAMEA2155077	GCA_001121925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/925/GCA_001121925.1_10492_1_22	-	MDUST185
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	1.94931	39.8	-	LWGU01	34	2120	1911	8/2/16	3/13/17	Scaffold	National Institute for Communicable Diseases	SAMN04337330	GCA_001697045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/045/GCA_001697045.1_ASM169704v1	-	30023
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.0864	39.9	-	MCIX01	241	2371	2055	8/29/16	3/13/17	Scaffold	National Institute for Communicable Diseases	SAMN04337327	GCA_001715895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/895/GCA_001715895.1_ASM171589v1	-	29170-12F
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72424	52	-	CJCY01	60	4877	4512	3/21/15	2/27/17	Scaffold	SC	SAMEA2154988	GCA_001122025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/025/GCA_001122025.1_10493_1_82	-	MDUST389
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	3.04038	32.7	-	FGBR01	71	3225	3071	2/10/16	3/6/17	Contig	SC	SAMEA1464583	GCA_900017505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/505/GCA_900017505.1_7712_8_27	-	st697
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87067	32.7	-	FGFI01	55	2986	2832	2/10/16	3/5/17	Contig	SC	SAMEA1464440	GCA_900017515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/515/GCA_900017515.1_7712_8_22	-	st687
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.64715	52	-	CJXD01	165	4790	4427	3/21/15	2/27/17	Scaffold	SC	SAMEA2059215	GCA_001122085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/085/GCA_001122085.1_9953_5_28	-	A348
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	1.97469	40.4	-	MCIZ01	300	2230	1952	8/29/16	3/13/17	Scaffold	National Institute for Communicable Diseases	SAMN04337332	GCA_001715925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/925/GCA_001715925.1_ASM171592v1	-	34399
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.08295	40.2	-	MCJA01	239	2363	2060	8/29/16	3/13/17	Scaffold	National Institute for Communicable Diseases	SAMN04337333	GCA_001715955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/955/GCA_001715955.1_ASM171595v1	-	34400
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3164	204701	Proteobacteria	Gammaproteobacteria	4.93302	51.8	-	CJRH01	50	5125	4743	3/21/15	2/27/17	Scaffold	SC	SAMEA1572008	GCA_001122105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/105/GCA_001122105.1_8525_3_49	-	Ke470
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85354	32.7	-	FGFJ01	72	2958	2804	2/10/16	3/5/17	Contig	SC	SAMEA1464450	GCA_900017525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/525/GCA_900017525.1_7712_8_25	-	st694
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8048	32.7	-	FGFX01	40	2927	2745	2/10/16	3/5/17	Contig	SC	SAMEA1464476	GCA_900017535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/535/GCA_900017535.1_7712_8_88	-	st854
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7262	52	-	CJPO01	45	4892	4534	3/21/15	2/27/17	Scaffold	SC	SAMEA1572784	GCA_001122165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/165/GCA_001122165.1_8490_5_23	-	MDUST23
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.13158	40	-	MDXN01	233	2398	2103	9/6/16	3/13/17	Scaffold	National Institute for Communicable Diseases	SAMN04337317	GCA_001719705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/705/GCA_001719705.1_ASM171970v1	-	20731-6B
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.11947	39.9	-	MDXV01	223	2366	2076	9/6/16	3/13/17	Scaffold	National Institute for Communicable Diseases	SAMN04337308	GCA_001719775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/775/GCA_001719775.1_ASM171977v1	-	12985-14
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72125	52	-	CJHT01	53	4881	4519	3/21/15	2/27/17	Scaffold	SC	SAMEA2155847	GCA_001122265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/265/GCA_001122265.1_10562_2_62	-	MDUST372
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83646	32.7	-	FGHL01	42	2934	2785	2/10/16	3/5/17	Contig	SC	SAMEA1464256	GCA_900017545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/545/GCA_900017545.1_7521_5_7	-	st991
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.73948	32.7	-	FGHT01	18	2884	2715	2/10/16	3/5/17	Contig	SC	SAMEA1464469	GCA_900017565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/565/GCA_900017565.1_7748_6_12	-	st1012
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.85099	52	-	CJHG01	61	5054	4686	3/21/15	2/27/17	Scaffold	SC	SAMEA2160785	GCA_001122365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/365/GCA_001122365.1_10562_2_37	-	MDUST263
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.14184	39.8	-	MDXT01	64	2342	2097	9/6/16	3/13/17	Scaffold	National Institute for Communicable Diseases	SAMN04337311	GCA_001719815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/815/GCA_001719815.1_ASM171981v1	-	16599-15A
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.09584	39.9	-	MDXX01	102	2351	2100	9/6/16	3/6/17	Scaffold	National Institute for Communicable Diseases	SAMN04337307	GCA_001719825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/825/GCA_001719825.1_ASM171982v1	-	10598-6A
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72072	52	-	CIYX01	42	4876	4520	3/21/15	2/27/17	Scaffold	SC	SAMEA2152908	GCA_001122465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/465/GCA_001122465.1_10426_1_6	-	np61
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.9463	32.7	-	FGHU01	72	3095	2914	2/10/16	3/6/17	Contig	SC	SAMEA1464457	GCA_900017575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/575/GCA_900017575.1_7521_5_18	-	st1013
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81985	32.7	-	FGLU01	54	2914	2760	2/10/16	3/5/17	Contig	SC	SAMEA1464174	GCA_900017585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/585/GCA_900017585.1_7521_5_78	-	st1443
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73574	52	-	CIZX01	61	4896	4533	3/21/15	2/27/17	Scaffold	SC	SAMEA2145578	GCA_001122625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/625/GCA_001122625.1_10492_1_47	-	MDUST255
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.36079	41.2	-	MDXY01	905	2482	2208	9/6/16	3/13/17	Scaffold	National Institute for Communicable Diseases	SAMN04337303	GCA_001719865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/865/GCA_001719865.1_ASM171986v1	-	8227-19F
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.1997	39.9	-	MDXS01	104	2449	2220	9/6/16	3/6/17	Scaffold	National Institute for Communicable Diseases	SAMN04337312	GCA_001719945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/945/GCA_001719945.1_ASM171994v1	-	18839-19A
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.76339	52	-	CJGC01	66	4927	4564	3/21/15	2/27/17	Scaffold	SC	SAMEA2147909	GCA_001122765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/765/GCA_001122765.1_10561_2_56	-	H12ESR04928-001A
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8688	32.7	-	FGLV01	51	3008	2820	2/10/16	3/5/17	Contig	SC	SAMEA1464312	GCA_900017595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/595/GCA_900017595.1_7521_5_80	-	st1445
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.88114	32.7	-	FGXE01	95	3016	2855	2/10/16	3/6/17	Contig	SC	SAMEA1469572	GCA_900017605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/605/GCA_900017605.1_7480_8_80	-	st2493
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.85082	52	-	CJGZ01	63	5061	4669	3/21/15	2/27/17	Scaffold	SC	SAMEA2153533	GCA_001122805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/805/GCA_001122805.1_10562_2_36	-	MDUST262
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.15446	39.9	-	MDYB01	243	2422	2135	9/6/16	3/13/17	Scaffold	National Institute for Communicable Diseases	SAMN04337300	GCA_001719965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/965/GCA_001719965.1_ASM171996v1	-	7200
Escherichia coli O26:H11	244319	PRJEB7864	271211	Proteobacteria	Gammaproteobacteria	5.67611	50.4	-	CDLB01	102	6201	5703	12/25/14	2/25/17	Contig	VETAGROSUP	SAMEA3145163	GCA_900000205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/000/205/GCA_900000205.1_Escherichia_coli_O26_H11_21765	-	Escherichia coli O26:H11 21765
Escherichia coli	562	PRJEB9817	401119	Proteobacteria	Gammaproteobacteria	4.98221	50.8	-	CXOX01	204	4879	4807	9/2/17	9/23/17	Contig	PASTEUR	SAMEA3479527	GCA_900005335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/005/335/GCA_900005335.1_clc_1094_204Ctgs	-	1094
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.17492	39.9	-	MDXU01	68	2426	2188	9/6/16	3/6/17	Scaffold	National Institute for Communicable Diseases	SAMN04337310	GCA_001719975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/719/975/GCA_001719975.1_ASM171997v1	-	16599-9V
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74947	52.1	-	CJSW01	51	4916	4550	3/21/15	2/27/17	Scaffold	SC	SAMEA1903870	GCA_001122965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/122/965/GCA_001122965.1_9475_6_41	-	1014383
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82788	32.7	-	FGXH01	102	2942	2773	2/10/16	3/5/17	Contig	SC	SAMEA1469684	GCA_900017615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/615/GCA_900017615.1_7480_8_83	-	st2515
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80669	32.7	-	FGXI01	56	2904	2752	2/10/16	3/6/17	Contig	SC	SAMEA1469678	GCA_900017635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/635/GCA_900017635.1_7480_8_84	-	st2523
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72431	52	-	CJQN01	42	4885	4524	3/21/15	2/27/17	Scaffold	SC	SAMEA1572802	GCA_001123065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/065/GCA_001123065.1_8490_6_54	-	MDUST54
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.0214	39.7	-	MDYF01	94	2244	1986	9/6/16	3/13/17	Scaffold	National Institute for Communicable Diseases	SAMN04337296	GCA_001720055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/055/GCA_001720055.1_ASM172005v1	-	699-6A
Escherichia coli	562	PRJEB12203	338936	Proteobacteria	Gammaproteobacteria	4.8349	50.6	-	FBUV01	74	5103	4748	8/15/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3715968	GCA_900007725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/725/GCA_900007725.1_M885_contigs	-	M885
Escherichia coli	562	PRJEB12203	338936	Proteobacteria	Gammaproteobacteria	4.79902	50.6	-	FBUL01	55	5066	4718	8/15/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3715969	GCA_900007735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/735/GCA_900007735.1_M900_contigs	-	M900
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.17117	40.6	-	MDYG01	853	2398	2087	9/6/16	3/13/17	Scaffold	National Institute for Communicable Diseases	SAMN04337294	GCA_001720075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/075/GCA_001720075.1_ASM172007v1	-	515-6A
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.8046	52	-	CJIE01	58	4961	4613	3/21/15	2/27/17	Scaffold	SC	SAMEA2163422	GCA_001123445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/445/GCA_001123445.1_10562_2_76	-	MDUST395
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78628	32.7	-	FGXJ01	49	2876	2727	2/10/16	3/5/17	Contig	SC	SAMEA1469682	GCA_900017645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/645/GCA_900017645.1_7480_8_86	-	st2530
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.90417	32.6	-	FGXM01	70	3044	2869	2/10/16	3/5/17	Contig	SC	SAMEA1469673	GCA_900017655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/655/GCA_900017655.1_7480_8_90	-	st2543
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74749	52	-	CJIH01	50	4925	4553	3/21/15	2/27/17	Scaffold	SC	SAMEA2156057	GCA_001123465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/465/GCA_001123465.1_10562_2_9	-	MDUST144
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.07384	40.1	-	LYQG01	232	2314	2048	9/15/16	3/13/17	Scaffold	National Institute for Communicable Diseases	SAMN04337328	GCA_001728845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/728/845/GCA_001728845.1_ASM172884v1	-	29546-19A
Escherichia coli	562	PRJEB12203	338936	Proteobacteria	Gammaproteobacteria	5.27889	50.5	-	FBUW01	129	-	-	8/15/16	8/15/16	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3715979	GCA_900007745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/007/745/GCA_900007745.1_ED369_contigs	-	ED369
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.36386	50.3	-	FAWK01	321	5930	5416	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677940	GCA_900008835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/835/GCA_900008835.1_ED195_contigs	-	ED195
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.04934	40.1	-	LZNV01	166	2321	2050	9/20/16	3/13/17	Scaffold	National Institute for Communicable Diseases	SAMN04337325	GCA_001735975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/735/975/GCA_001735975.1_ASM173597v1	-	22874-14
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72388	52	-	CJPR01	41	4888	4534	3/21/15	2/27/17	Scaffold	SC	SAMEA1572863	GCA_001123485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/485/GCA_001123485.1_8490_5_27	-	MDUST27
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78439	32.7	-	FGXO01	48	2872	2728	2/10/16	3/6/17	Contig	SC	SAMEA1469595	GCA_900017665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/665/GCA_900017665.1_7480_8_93	-	st2566
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82804	32.7	-	FGXP01	63	2928	2774	2/10/16	3/5/17	Contig	SC	SAMEA1464339	GCA_900017675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/675/GCA_900017675.1_7748_6_34	-	st2572
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93206	51.8	-	CJNU01	63	5127	4741	3/21/15	2/27/17	Scaffold	SC	SAMEA2150470	GCA_001123645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/645/GCA_001123645.1_10608_2_66	-	2012-020127
Streptococcus pneumoniae	1313	PRJNA302716	302716	Terrabacteria group	Firmicutes	2.07122	39.6	-	MAVR01	57	2275	2047	10/28/16	3/14/17	Scaffold	TAILORED-Treatment project	SAMN05366909	GCA_001856065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/065/GCA_001856065.1_ASM185606v1	-	CCUG 36618
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.31133	50.2	-	FAWV01	448	5895	5334	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677950	GCA_900008845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/008/845/GCA_900008845.1_ED423_contigs	-	ED423
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.1997	50.4	-	FAVM01	260	5686	5214	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677954	GCA_900009485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/485/GCA_900009485.1_ED608_contigs	-	ED608
Streptococcus pneumoniae	1313	PRJNA302716	302716	Terrabacteria group	Firmicutes	2.0907	39.6	-	MECM01	51	2266	2042	11/7/16	3/14/17	Scaffold	TAILORED-Treatment project	SAMN05715961	GCA_001870645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/870/645/GCA_001870645.1_ASM187064v1	-	CCUG 45673
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.95297	51.8	-	CJOJ01	56	5164	4773	3/21/15	2/27/17	Scaffold	SC	SAMEA1406330	GCA_001123685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/685/GCA_001123685.1_7468_7_86	-	IB5375
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.7528	32.7	-	FGXQ01	33	2833	2686	2/10/16	3/5/17	Contig	SC	SAMEA1464345	GCA_900017685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/685/GCA_900017685.1_7748_6_37	-	st2578
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.831	32.7	-	FGXS01	41	2934	2777	2/10/16	3/5/17	Contig	SC	SAMEA1464367	GCA_900017695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/695/GCA_900017695.1_7748_6_38	-	st2579
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.78278	52.1	-	CJAR01	74	4967	4608	3/21/15	2/27/17	Scaffold	SC	SAMEA2162023	GCA_001124105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/105/GCA_001124105.1_10492_1_70	-	MDUST366
Streptococcus pneumoniae	1313	PRJNA296846	296846	Terrabacteria group	Firmicutes	1.98459	39.5	-	LOEA01	100	2135	1958	12/30/16	3/6/17	Scaffold	Yonsei University College of Medicine	SAMN04306532	GCA_001925145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/925/145/GCA_001925145.1_ASM192514v1	-	HK02-14
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.08163	50.5	-	FAVV01	331	5550	5073	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677936	GCA_900010045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/045/GCA_900010045.1_ED082_contigs	-	ED082
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.27048	50.2	-	FAWO01	307	5700	5211	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677931	GCA_900010055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/055/GCA_900010055.1_ED010_contigs	-	ED010
Streptococcus pneumoniae	1313	PRJNA296846	296846	Terrabacteria group	Firmicutes	2.00833	39.5	-	LODZ01	100	2116	1940	12/30/16	3/14/17	Scaffold	Yonsei University College of Medicine	SAMN04306531	GCA_001925155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/925/155/GCA_001925155.1_ASM192515v1	-	V03-9
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.73787	52.1	-	CJOH01	53	4910	4563	3/21/15	2/27/17	Scaffold	SC	SAMEA1406366	GCA_001124285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/285/GCA_001124285.1_7468_7_82	-	IB5371
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.7591	32.7	-	FGXV01	42	2850	2698	2/10/16	3/5/17	Contig	SC	SAMEA1464238	GCA_900017705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/705/GCA_900017705.1_7748_6_40	-	st2584
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78721	32.7	-	FGXT01	33	2879	2729	2/10/16	3/5/17	Contig	SC	SAMEA1464241	GCA_900017715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/715/GCA_900017715.1_7748_6_41	-	st2585
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93113	51.8	-	CJLP01	108	5141	4724	3/21/15	2/27/17	Scaffold	SC	SAMEA2154017	GCA_001124385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/385/GCA_001124385.1_10607_1_46	-	2008-011433
Streptococcus pneumoniae	1313	PRJNA296846	296846	Terrabacteria group	Firmicutes	2.01622	39.6	-	LODX01	100	2157	1953	12/30/16	3/15/17	Scaffold	Yonsei University College of Medicine	SAMN04108951	GCA_001925165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/925/165/GCA_001925165.1_ASM192516v1	-	M12-6
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.31461	50.2	-	FAVZ01	350	5867	5371	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677945	GCA_900010065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/010/065/GCA_900010065.1_ED392_contigs	-	ED392
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.00961	50.6	-	FAVQ01	496	5555	5024	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677970	GCA_900011005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/005/GCA_900011005.1_ED728_contigs	-	ED728
Streptococcus pneumoniae	1313	PRJNA296846	296846	Terrabacteria group	Firmicutes	2.06658	39.6	-	LODY01	100	2234	2029	12/30/16	3/6/17	Scaffold	Yonsei University College of Medicine	SAMN04108952	GCA_001925185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/925/185/GCA_001925185.1_ASM192518v1	-	K13-21
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73361	52	-	CJDR01	57	4903	4537	3/21/15	2/27/17	Scaffold	SC	SAMEA2148364	GCA_001124405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/405/GCA_001124405.1_10541_2_26	-	MDUST285
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.74253	32.7	-	FGHD01	34	2803	2659	2/10/16	3/5/17	Contig	SC	SAMEA1317557	GCA_900017965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/965/GCA_900017965.1_7414_8_89	-	st964
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80057	32.7	-	FGHQ01	64	2886	2744	2/10/16	3/5/17	Contig	SC	SAMEA1464479	GCA_900017975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/975/GCA_900017975.1_7521_5_12	-	st1000
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71021	52.1	-	CJWV01	48	4870	4518	3/21/15	2/27/17	Scaffold	SC	SAMEA2057244	GCA_001124685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/685/GCA_001124685.1_9953_5_17	-	A284
Streptococcus pneumoniae	1313	PRJNA296846	296846	Terrabacteria group	Firmicutes	1.97711	39.5	-	LOEB01	100	2141	1940	12/30/16	3/15/17	Scaffold	Yonsei University College of Medicine	SAMN04306533	GCA_001925225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/925/225/GCA_001925225.1_ASM192522v1	-	J01-5
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.36496	50.2	-	FAWH01	254	5853	5358	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677968	GCA_900011015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/011/015/GCA_900011015.1_ED680_contigs	-	ED680
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.21321	50.5	-	FAWS01	280	5723	5220	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677961	GCA_900013265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/265/GCA_900013265.1_ED664_contigs	-	ED664
Streptococcus pneumoniae	1313	PRJNA302716	302716	Terrabacteria group	Firmicutes	2.06404	39.7	-	MLFX01	48	2259	2049	2/1/17	3/15/17	Scaffold	TAILORED-Treatment project	SAMN05912866	GCA_001982685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/685/GCA_001982685.1_ASM198268v1	-	CCUG 35561
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.85108	52	-	CJGR01	63	5079	4626	3/21/15	2/27/17	Scaffold	SC	SAMEA2154117	GCA_001124805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/805/GCA_001124805.1_10562_2_27	-	MDUST230
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77844	32.7	-	FGHP01	46	2873	2723	2/10/16	3/6/17	Contig	SC	SAMEA1464509	GCA_900017985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/985/GCA_900017985.1_7521_5_13	-	st1002
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78896	32.7	-	FGHS01	39	2872	2731	2/10/16	3/5/17	Contig	SC	SAMEA1464434	GCA_900017995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/995/GCA_900017995.1_7521_5_16	-	st1009
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71709	52.1	-	CJYP01	45	4869	4512	3/21/15	2/27/17	Scaffold	SC	SAMEA2056534	GCA_001124885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/885/GCA_001124885.1_9953_5_72	-	LNT1377
Streptococcus pneumoniae	1313	PRJNA302716	302716	Terrabacteria group	Firmicutes	1.97661	39.8	-	MLGA01	60	2125	1911	2/1/17	3/15/17	Scaffold	TAILORED-Treatment project	SAMN05912981	GCA_001982705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/705/GCA_001982705.1_ASM198270v1	-	CCUG 36800
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.86196	50.3	-	FAWF01	566	6686	5965	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677932	GCA_900013275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/013/275/GCA_900013275.1_ED017_contigs	-	ED017
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.45195	50.2	-	FAWZ01	311	6023	5505	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677964	GCA_900014215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/215/GCA_900014215.1_ED669_contigs	-	ED669
Streptococcus pneumoniae	1313	PRJNA302716	302716	Terrabacteria group	Firmicutes	2.05516	39.7	-	MLFY01	70	2243	2007	2/1/17	3/15/17	Scaffold	TAILORED-Treatment project	SAMN05912978	GCA_001982715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/715/GCA_001982715.1_ASM198271v1	-	CCUG 32672
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82432	52	-	CJHH01	45	5013	4653	3/21/15	2/27/17	Scaffold	SC	SAMEA2157375	GCA_001124945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/945/GCA_001124945.1_10562_2_4	-	MDUST122
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80377	32.7	-	FGHW01	46	2896	2744	2/10/16	3/5/17	Contig	SC	SAMEA1464398	GCA_900018005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/005/GCA_900018005.1_7521_5_23	-	st1023
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80438	32.7	-	FGHY01	37	2925	2746	2/10/16	3/5/17	Contig	SC	SAMEA1464416	GCA_900018015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/015/GCA_900018015.1_7521_5_21	-	st1016
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74197	52.1	-	CJYT01	41	4922	4571	3/21/15	2/27/17	Scaffold	SC	SAMEA2056535	GCA_001124985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/985/GCA_001124985.1_9953_5_75	-	LNT1497
Streptococcus pneumoniae	1313	PRJNA302716	302716	Terrabacteria group	Firmicutes	1.97624	39.7	-	MLFZ01	30	2162	1949	2/1/17	3/6/17	Scaffold	TAILORED-Treatment project	SAMN05912979	GCA_001982725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/725/GCA_001982725.1_ASM198272v1	-	CCUG 35229
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.25117	50.4	-	FAVT01	319	5669	5158	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677960	GCA_900014325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/014/325/GCA_900014325.1_ED657_contigs	-	ED657
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.25121	50.2	-	FAWQ01	353	5740	5240	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677962	GCA_900015195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/195/GCA_900015195.1_ED666_contigs	-	ED666
Streptococcus pneumoniae	1313	PRJNA331210	331210	Terrabacteria group	Firmicutes	2.02916	39.7	-	MCGY01	64	2197	2025	2/7/17	3/15/17	Scaffold	Shanghai Children's Hospital	SAMN05439884	GCA_001990165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/165/GCA_001990165.1_ASM199016v1	-	SPN_01
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73521	52.1	-	CJBO01	56	4929	4552	3/21/15	2/27/17	Scaffold	SC	SAMEA2161059	GCA_001125005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/005/GCA_001125005.1_10493_1_32	-	MDUST194
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83145	32.7	-	FGHX01	51	2928	2776	2/10/16	3/5/17	Contig	SC	SAMEA1464371	GCA_900018025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/025/GCA_900018025.1_7521_5_24	-	st1024
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.95108	32.7	-	FGIA01	72	3118	2927	2/10/16	3/5/17	Contig	SC	SAMEA1464226	GCA_900018035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/035/GCA_900018035.1_7521_5_26	-	st1027
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71959	52	-	CJEI01	53	4882	4519	3/21/15	2/27/17	Scaffold	SC	SAMEA2159082	GCA_001125205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/205/GCA_001125205.1_10541_2_43	-	MDUST325
Streptococcus pneumoniae	1313	PRJNA341407	341407	Terrabacteria group	Firmicutes	2.02431	39.6	-	MTGB01	55	2198	1969	2/13/17	3/15/17	Scaffold	California Department of Public Health	SAMN05721777	GCA_001999365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/365/GCA_001999365.1_ASM199936v1	-	ATCC 6305
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.30577	50.2	-	FAWG01	252	5745	5293	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677963	GCA_900015375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/375/GCA_900015375.1_ED668_contigs	-	ED668
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.35271	50.4	-	FAVW01	367	5932	5414	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677966	GCA_900015385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/385/GCA_900015385.1_ED676_contigs	-	ED676
Streptococcus pneumoniae	1313	PRJNA302716	302716	Terrabacteria group	Firmicutes	2.11035	39.6	-	MNBH01	53	2336	2092	3/3/17	3/6/17	Scaffold	TAILORED-Treatment project	SAMN05916360	GCA_002014075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/075/GCA_002014075.1_ASM201407v1	-	CCUG 69381
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72952	52	-	CJEZ01	61	4882	4520	3/21/15	2/27/17	Scaffold	SC	SAMEA2144076	GCA_001125245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/245/GCA_001125245.1_10561_2_12	-	np8
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85194	32.7	-	FGHZ01	63	2947	2799	2/10/16	3/5/17	Contig	SC	SAMEA1464212	GCA_900018045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/045/GCA_900018045.1_7521_5_29	-	st1044
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83617	32.7	-	FGIE01	47	2956	2784	2/10/16	3/5/17	Contig	SC	SAMEA1464610	GCA_900018055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/055/GCA_900018055.1_7521_5_33	-	st1061
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72115	52	-	CJDZ01	54	4883	4533	3/21/15	2/27/17	Scaffold	SC	SAMEA2145106	GCA_001125345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/345/GCA_001125345.1_10541_2_29	-	MDUST303
Streptococcus pneumoniae	1313	PRJNA302716	302716	Terrabacteria group	Firmicutes	2.18231	39.5	-	MVBL01	48	2373	2154	3/3/17	3/6/17	Scaffold	TAILORED-Treatment project	SAMN05916359	GCA_002014095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/095/GCA_002014095.1_ASM201409v1	-	CCUG 69380
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.08378	50.3	-	FAWX01	786	5803	5077	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677965	GCA_900015395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/395/GCA_900015395.1_ED672_contigs	-	ED672
Escherichia coli	562	PRJEB11777	313756	Proteobacteria	Gammaproteobacteria	4.83489	50.6	-	FAVL01	129	5007	4658	3/1/16	2/25/17	Contig	INSTITUTO NACIONAL DE SALUD	SAMEA3678975	GCA_900015405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/405/GCA_900015405.1_E._coli_102701	-	10270
Streptococcus pneumoniae	1313	PRJNA302716	302716	Terrabacteria group	Firmicutes	2.0625	39.6	-	MNBI01	44	2252	2042	3/3/17	3/6/17	Scaffold	TAILORED-Treatment project	SAMN05916380	GCA_002014115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/115/GCA_002014115.1_ASM201411v1	-	CCUG 69382
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.87151	51.9	-	CIYQ01	55	5073	4700	3/21/15	2/27/17	Scaffold	SC	SAMEA2153035	GCA_001125465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/465/GCA_001125465.1_10426_1_4	-	3080/3
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.90636	32.7	-	FGID01	49	3068	2869	2/10/16	3/6/17	Contig	SC	SAMEA1464628	GCA_900018065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/065/GCA_900018065.1_7748_6_13	-	st1066
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84149	32.7	-	FGIK01	66	2938	2779	2/10/16	3/5/17	Contig	SC	SAMEA1464621	GCA_900018075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/075/GCA_900018075.1_7521_5_35	-	st1069
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	5.00087	52.1	-	CQHA01	56	5219	4914	3/23/15	2/27/17	Scaffold	SC	SAMEA1568475	GCA_001125725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/725/GCA_001125725.1_8490_2_57	-	CH14
Streptococcus pneumoniae	1313	PRJNA301788	301788	Terrabacteria group	Firmicutes	2.00846	39.6	-	LNCA01	110	2176	1977	3/3/17	3/6/17	Scaffold	TAILORED-Treatment project	SAMN04259810	GCA_002016615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/016/615/GCA_002016615.1_ASM201661v1	-	CCUG 63093
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.2869	50.3	-	FAVS01	269	5716	5275	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677957	GCA_900015695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/695/GCA_900015695.1_ED647_contigs	-	ED647
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.22621	50.2	-	FAWN01	269	5676	5209	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677956	GCA_900015705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/705/GCA_900015705.1_ED644_contigs	-	ED644
Streptococcus pneumoniae	1313	PRJNA378807	378807	Terrabacteria group	Firmicutes	2.119	39.7	-	NANR01	68	2375	2149	4/6/17	4/8/17	Scaffold	Shanghai Children's Hospital	SAMN06562570	GCA_002081035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/035/GCA_002081035.1_ASM208103v1	-	SPN_23
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72569	52	-	CJQG01	40	4895	4537	3/21/15	2/27/17	Scaffold	SC	SAMEA1572847	GCA_001125885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/885/GCA_001125885.1_8490_6_43	-	MDUST43
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79225	32.7	-	FGIL01	59	2888	2732	2/10/16	3/5/17	Contig	SC	SAMEA1464262	GCA_900018085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/085/GCA_900018085.1_7521_5_44	-	st1105
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79873	32.7	-	FGIN01	52	2889	2745	2/10/16	3/6/17	Contig	SC	SAMEA1469657	GCA_900018095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/095/GCA_900018095.1_7480_7_2	-	st1114
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72446	52	-	CJDO01	56	4884	4510	3/21/15	2/27/17	Scaffold	SC	SAMEA2162721	GCA_001125965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/965/GCA_001125965.1_10541_2_13	-	MDUST189
Streptococcus pneumoniae	1313	PRJNA378807	378807	Terrabacteria group	Firmicutes	2.03059	39.6	-	NANP01	48	2241	2025	4/6/17	4/8/17	Scaffold	Shanghai Children's Hospital	SAMN06562572	GCA_002081045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/045/GCA_002081045.1_ASM208104v1	-	SPN_25
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.239	50.2	-	FAWI01	258	5665	5193	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677951	GCA_900015715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/715/GCA_900015715.1_ED449_contigs	-	ED449
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.35333	50.2	-	FAWC01	264	5797	5324	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677953	GCA_900015725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/725/GCA_900015725.1_ED604_contigs	-	ED604
Streptococcus pneumoniae	1313	PRJNA378807	378807	Terrabacteria group	Firmicutes	2.04794	39.7	-	NANT01	52	2233	2021	4/6/17	4/8/17	Scaffold	Shanghai Children's Hospital	SAMN06562568	GCA_002081065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/065/GCA_002081065.1_ASM208106v1	-	SPN_21
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71929	52	-	CJED01	55	4869	4514	3/21/15	2/27/17	Scaffold	SC	SAMEA2150077	GCA_001126125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/125/GCA_001126125.1_10541_2_32	-	MDUST306
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82985	32.7	-	FGIX01	62	2928	2780	2/10/16	3/6/17	Contig	SC	SAMEA1469709	GCA_900018105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/105/GCA_900018105.1_7480_7_15	-	st1142
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81475	32.7	-	FGJA01	53	2906	2762	2/10/16	3/5/17	Contig	SC	SAMEA1469619	GCA_900018115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/115/GCA_900018115.1_7480_7_18	-	st1149
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74388	52.1	-	CJSQ01	48	4913	4550	3/21/15	2/27/17	Scaffold	SC	SAMEA1903858	GCA_001126165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/165/GCA_001126165.1_9475_6_34	-	1018211
Streptococcus pneumoniae	1313	PRJNA378807	378807	Terrabacteria group	Firmicutes	2.16061	39.4	-	NANU01	86	2365	2132	4/6/17	4/8/17	Scaffold	Shanghai Children's Hospital	SAMN06562567	GCA_002081095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/095/GCA_002081095.1_ASM208109v1	-	SPN_20
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.1532	50.4	-	FAWB01	338	5673	5156	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677938	GCA_900015735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/735/GCA_900015735.1_ED178_contigs	-	ED178
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.44009	50.3	-	FAWP01	318	5955	5488	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677959	GCA_900015745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/745/GCA_900015745.1_ED654_contigs	-	ED654
Streptococcus pneumoniae	1313	PRJNA378807	378807	Terrabacteria group	Firmicutes	2.06223	39.6	-	NANW01	46	2268	2050	4/6/17	4/8/17	Scaffold	Shanghai Children's Hospital	SAMN06562565	GCA_002081115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/115/GCA_002081115.1_ASM208111v1	-	SPN_18
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.68245	52.1	-	CIXS01	41	4847	4491	3/21/15	2/27/17	Scaffold	SC	SAMEA2072674	GCA_001126385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/385/GCA_001126385.1_10349_1_6	-	ERL02425
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.93128	32.7	-	FGJL01	59	3053	2891	2/10/16	3/5/17	Contig	SC	SAMEA1469680	GCA_900018125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/125/GCA_900018125.1_7480_7_36	-	st1203
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.90605	32.7	-	FGJQ01	51	3061	2887	2/10/16	3/6/17	Contig	SC	SAMEA1469599	GCA_900018135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/135/GCA_900018135.1_7480_7_44	-	st1227
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74232	52.1	-	CJMJ01	45	4907	4545	3/21/15	2/27/17	Scaffold	SC	SAMEA2155727	GCA_001126405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/405/GCA_001126405.1_10607_2_17	-	BKQ4NZ
Streptococcus pneumoniae	1313	PRJNA378807	378807	Terrabacteria group	Firmicutes	2.16285	39.6	-	NANX01	65	2393	2160	4/6/17	4/8/17	Scaffold	Shanghai Children's Hospital	SAMN06562564	GCA_002081125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/125/GCA_002081125.1_ASM208112v1	-	SPN_17
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.2725	50.3	-	FAVR01	256	5675	5210	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677933	GCA_900015755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/755/GCA_900015755.1_ED040_contigs	-	ED040
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.3334	50.1	-	FAWJ01	253	5792	5318	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677948	GCA_900015765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/765/GCA_900015765.1_ED414_contigs	-	ED414
Streptococcus pneumoniae	1313	PRJNA378807	378807	Terrabacteria group	Firmicutes	2.08404	39.7	-	NANY01	65	2275	2066	4/6/17	4/8/17	Scaffold	Shanghai Children's Hospital	SAMN06562563	GCA_002081155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/155/GCA_002081155.1_ASM208115v1	-	SPN_16
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72743	52	-	CJPL01	44	4892	4529	3/21/15	2/27/17	Scaffold	SC	SAMEA1572849	GCA_001126865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/865/GCA_001126865.1_8490_5_16	-	MDUST16
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.83817	32.7	-	FGJR01	28	2969	2791	2/10/16	3/6/17	Contig	SC	SAMEA1469594	GCA_900018145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/145/GCA_900018145.1_8728_5_28	-	st1229
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79582	32.7	-	FGJT01	56	2892	2750	2/10/16	3/5/17	Contig	SC	SAMEA1469575	GCA_900018155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/155/GCA_900018155.1_7480_7_48	-	st1243
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70521	52.1	-	CIXH01	55	4863	4500	3/21/15	2/27/17	Scaffold	SC	SAMEA2072902	GCA_001126885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/885/GCA_001126885.1_10349_1_38	-	ERL084047
Streptococcus pneumoniae	1313	PRJNA378807	378807	Terrabacteria group	Firmicutes	2.06846	39.5	-	NANZ01	59	2260	2039	4/6/17	4/8/17	Scaffold	Shanghai Children's Hospital	SAMN06562562	GCA_002081175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/175/GCA_002081175.1_ASM208117v1	-	SPN_15
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.22194	50.2	-	FAVP01	309	5682	5206	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677947	GCA_900015775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/775/GCA_900015775.1_ED413_contigs	-	ED413
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	4.95148	50.5	-	FAWE01	628	5585	4926	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677934	GCA_900015785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/785/GCA_900015785.1_ED073_contigs	-	ED073
Streptococcus pneumoniae	1313	PRJNA378807	378807	Terrabacteria group	Firmicutes	2.10419	39.6	-	NAOA01	61	2304	2087	4/6/17	4/8/17	Scaffold	Shanghai Children's Hospital	SAMN06562561	GCA_002081195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/195/GCA_002081195.1_ASM208119v1	-	SPN_14
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.76691	52.1	-	CJAX01	55	4948	4571	3/21/15	2/27/17	Scaffold	SC	SAMEA2152909	GCA_001127185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/185/GCA_001127185.1_10492_1_77	-	MDUST396
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87016	32.7	-	FGJV01	91	3020	2845	2/10/16	3/5/17	Contig	SC	SAMEA1469584	GCA_900018165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/165/GCA_900018165.1_7480_7_50	-	st1247
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86926	32.7	-	FGJU01	89	3004	2840	2/10/16	3/5/17	Contig	SC	SAMEA1469587	GCA_900018175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/175/GCA_900018175.1_7480_7_51	-	st1249
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72305	52	-	CJHX01	57	4890	4525	3/21/15	2/27/17	Scaffold	SC	SAMEA2161521	GCA_001127385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/385/GCA_001127385.1_10562_2_69	-	MDUST379
Streptococcus pneumoniae	1313	PRJNA378807	378807	Terrabacteria group	Firmicutes	2.11835	39.7	-	NAOB01	68	2314	2119	4/6/17	4/8/17	Scaffold	Shanghai Children's Hospital	SAMN06562560	GCA_002081205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/205/GCA_002081205.1_ASM208120v1	-	SPN_13
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.30679	50.4	-	FAWM01	355	5858	5370	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677935	GCA_900015795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/795/GCA_900015795.1_ED075_contigs	-	ED075
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.09043	50.4	-	FAWU01	340	5550	5071	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677944	GCA_900015805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/805/GCA_900015805.1_ED287_contigs	-	ED287
Streptococcus pneumoniae	1313	PRJNA378807	378807	Terrabacteria group	Firmicutes	2.08463	39.8	-	NAOC01	57	2292	2097	4/6/17	4/8/17	Scaffold	Shanghai Children's Hospital	SAMN06562559	GCA_002081225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/225/GCA_002081225.1_ASM208122v1	-	SPN_12
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69604	52	-	CJEA01	53	4847	4489	3/21/15	2/27/17	Scaffold	SC	SAMEA2161991	GCA_001127505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/505/GCA_001127505.1_10541_2_28	-	MDUST294
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82951	32.7	-	FGKA01	76	2933	2784	2/10/16	3/5/17	Contig	SC	SAMEA1469701	GCA_900018185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/185/GCA_900018185.1_7480_7_56	-	st1268
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80949	32.7	-	FGKD01	93	2921	2771	2/10/16	3/6/17	Contig	SC	SAMEA1469598	GCA_900018195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/195/GCA_900018195.1_7480_7_63	-	st1283
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.79198	52.1	-	CILG01	71	4999	4626	3/21/15	2/27/17	Scaffold	SC	SAMEA2145422	GCA_001127645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/645/GCA_001127645.1_10562_2_19	-	MDUST191
Streptococcus pneumoniae	1313	PRJNA378807	378807	Terrabacteria group	Firmicutes	2.14511	39.6	-	NANQ01	64	2362	2141	4/6/17	4/8/17	Scaffold	Shanghai Children's Hospital	SAMN06562571	GCA_002081255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/255/GCA_002081255.1_ASM208125v1	-	SPN_24
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.21307	50.4	-	FAVY01	277	5643	5151	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677952	GCA_900015815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/815/GCA_900015815.1_ED603_contigs	-	ED603
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.39856	50.1	-	FAWT01	370	5916	5395	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677949	GCA_900015825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/825/GCA_900015825.1_ED415_contigs	-	ED415
Streptococcus pneumoniae	1313	PRJNA378807	378807	Terrabacteria group	Firmicutes	2.04845	39.6	-	NANV01	63	2213	2005	4/6/17	4/8/17	Scaffold	Shanghai Children's Hospital	SAMN06562566	GCA_002081275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/275/GCA_002081275.1_ASM208127v1	-	SPN_19
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73323	52	-	CJZD01	81	4893	4532	3/21/15	2/27/17	Scaffold	SC	SAMEA2056355	GCA_001127685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/685/GCA_001127685.1_9953_5_9	-	A275
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78444	32.7	-	FGKE01	68	2884	2732	2/10/16	3/5/17	Contig	SC	SAMEA1469600	GCA_900018205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/205/GCA_900018205.1_7480_7_65	-	st1285
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81607	32.7	-	FGKJ01	66	2910	2760	2/10/16	3/5/17	Contig	SC	SAMEA1469563	GCA_900018215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/215/GCA_900018215.1_7480_7_72	-	st1296
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.97516	52.1	-	CQGL01	53	5158	4871	3/23/15	2/27/17	Scaffold	SC	SAMEA1568541	GCA_001127885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/885/GCA_001127885.1_8490_2_71	-	CH28
Streptococcus pneumoniae	1313	PRJNA378807	378807	Terrabacteria group	Firmicutes	2.10135	39.6	-	NAOD01	67	2309	2098	4/6/17	4/8/17	Scaffold	Shanghai Children's Hospital	SAMN06562558	GCA_002081295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/295/GCA_002081295.1_ASM208129v1	-	SPN_11
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.19028	50.4	-	FAWR01	336	5717	5198	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677937	GCA_900015835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/835/GCA_900015835.1_ED142_contigs	-	ED142
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.24552	50.2	-	FAWL01	241	5662	5202	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677958	GCA_900015845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/845/GCA_900015845.1_ED653_contigs	-	ED653
Streptococcus pneumoniae	1313	PRJNA378807	378807	Terrabacteria group	Firmicutes	2.0806	39.8	-	NAOE01	66	2284	2075	4/6/17	4/8/17	Scaffold	Shanghai Children's Hospital	SAMN06562557	GCA_002081315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/315/GCA_002081315.1_ASM208131v1	-	SPN_10
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72689	52.1	-	CIXA01	58	4911	4532	3/21/15	2/27/17	Scaffold	SC	SAMEA2072905	GCA_001128025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/025/GCA_001128025.1_10349_1_47	-	ERL09383
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83905	32.7	-	FGKK01	36	2967	2835	2/10/16	3/6/17	Contig	SC	SAMEA1469581	GCA_900018225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/225/GCA_900018225.1_7480_7_75	-	st1307
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.96027	32.7	-	FGKM01	72	3117	2930	2/10/16	3/5/17	Contig	SC	SAMEA1469579	GCA_900018235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/235/GCA_900018235.1_7480_7_77	-	st1309
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7339	52	-	CJOO01	44	4893	4533	3/21/15	2/27/17	Scaffold	SC	SAMEA1572807	GCA_001128065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/065/GCA_001128065.1_8447_8_11	-	MDUST83
Streptococcus pneumoniae	1313	PRJNA378807	378807	Terrabacteria group	Firmicutes	2.06641	39.5	-	NAOF01	61	2256	2040	4/6/17	4/8/17	Scaffold	Shanghai Children's Hospital	SAMN06562556	GCA_002081325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/325/GCA_002081325.1_ASM208132v1	-	SPN_09
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.24492	50.4	-	FAVO01	266	5713	5238	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677939	GCA_900015855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/855/GCA_900015855.1_ED180_contigs	-	ED180
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.33354	50.3	-	FAVU01	740	6163	5424	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677946	GCA_900015865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/865/GCA_900015865.1_ED411_contigs	-	ED411
Streptococcus pneumoniae	1313	PRJNA378807	378807	Terrabacteria group	Firmicutes	2.11429	39.6	-	NAOG01	50	2333	2103	4/6/17	4/8/17	Scaffold	Shanghai Children's Hospital	SAMN06562555	GCA_002081355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/355/GCA_002081355.1_ASM208135v1	-	SPN_08
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.6975	52.1	-	CJFI01	54	4853	4500	3/21/15	2/27/17	Scaffold	SC	SAMEA2162761	GCA_001128305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/305/GCA_001128305.1_10561_2_32	-	np50
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.7862	32.7	-	FGKY01	47	2873	2738	2/10/16	3/5/17	Contig	SC	SAMEA1469583	GCA_900018255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/255/GCA_900018255.1_7480_7_94	-	st1357
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80904	32.7	-	FGLD01	76	2917	2754	2/10/16	3/5/17	Contig	SC	SAMEA1464277	GCA_900018265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/265/GCA_900018265.1_7521_5_55	-	st1377
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72806	52	-	CJQL01	42	4896	4541	3/21/15	2/27/17	Scaffold	SC	SAMEA1572826	GCA_001128425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/425/GCA_001128425.1_8490_6_58	-	MDUST58
Streptococcus pneumoniae	1313	PRJNA378807	378807	Terrabacteria group	Firmicutes	2.05949	39.5	-	NAOH01	59	2242	2032	4/6/17	4/8/17	Scaffold	Shanghai Children's Hospital	SAMN06562554	GCA_002081365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/365/GCA_002081365.1_ASM208136v1	-	SPN_07
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.64401	50.3	-	FAWA01	495	6350	5743	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677972	GCA_900015875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/875/GCA_900015875.1_ED766_contigs	-	ED766
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.33026	50.3	-	FAVN01	410	5905	5361	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677971	GCA_900015885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/885/GCA_900015885.1_ED729_contigs	-	ED729
Streptococcus pneumoniae	1313	PRJNA378807	378807	Terrabacteria group	Firmicutes	2.07018	39.6	-	NAOJ01	67	2277	2057	4/6/17	4/8/17	Scaffold	Shanghai Children's Hospital	SAMN06562552	GCA_002081385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/385/GCA_002081385.1_ASM208138v1	-	SPN_05
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73402	52	-	CJYA01	44	4903	4554	3/21/15	2/27/17	Scaffold	SC	SAMEA2057363	GCA_001128545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/545/GCA_001128545.1_9953_5_56	-	A392
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83135	32.7	-	FGLI01	49	2941	2793	2/10/16	3/5/17	Contig	SC	SAMEA1464358	GCA_900018275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/275/GCA_900018275.1_7521_5_62	-	st1388
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84805	32.7	-	FGLM01	92	2987	2804	2/10/16	3/5/17	Contig	SC	SAMEA1464540	GCA_900018285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/285/GCA_900018285.1_7521_5_67	-	st1401
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72469	52	-	CIXU01	55	4882	4501	3/21/15	2/27/17	Scaffold	SC	SAMEA2072659	GCA_001128625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/625/GCA_001128625.1_10349_1_61	-	ERL1048
Streptococcus pneumoniae	1313	PRJNA378807	378807	Terrabacteria group	Firmicutes	2.0356	39.7	-	NAOI01	68	2214	2031	4/6/17	4/8/17	Scaffold	Shanghai Children's Hospital	SAMN06562553	GCA_002081405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/405/GCA_002081405.1_ASM208140v1	-	SPN_06
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.14681	50.2	-	FAWD01	469	5668	5116	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677969	GCA_900015895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/895/GCA_900015895.1_ED699_contigs	-	ED699
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.11505	50.3	-	FAWW01	731	5791	5129	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677967	GCA_900015905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/905/GCA_900015905.1_ED679_contigs	-	ED679
Streptococcus pneumoniae	1313	PRJNA378807	378807	Terrabacteria group	Firmicutes	2.02798	39.7	-	NAOK01	64	2190	2006	4/6/17	4/8/17	Scaffold	Shanghai Children's Hospital	SAMN06562551	GCA_002081435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/435/GCA_002081435.1_ASM208143v1	-	SPN_04
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.75864	52.1	-	CJWU01	42	4930	4573	3/21/15	2/27/17	Scaffold	SC	SAMEA2057243	GCA_001129105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/105/GCA_001129105.1_9953_5_14	-	A281
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.94475	32.7	-	FGLS01	62	3095	2903	2/10/16	3/5/17	Contig	SC	SAMEA1464185	GCA_900018295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/295/GCA_900018295.1_7521_5_75	-	st1434
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82717	32.7	-	FGMB01	56	2933	2778	2/10/16	3/5/17	Contig	SC	SAMEA1464482	GCA_900018305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/305/GCA_900018305.1_7521_5_86	-	st1452
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72222	52	-	CIXR01	57	4865	4502	3/21/15	2/27/17	Scaffold	SC	SAMEA2072657	GCA_001129145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/145/GCA_001129145.1_10349_1_58	-	ERL10338
Streptococcus pneumoniae	1313	PRJNA378807	378807	Terrabacteria group	Firmicutes	2.07122	39.8	-	NAOM01	67	2266	2072	4/6/17	4/8/17	Scaffold	Shanghai Children's Hospital	SAMN06562549	GCA_002081455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/455/GCA_002081455.1_ASM208145v1	-	SPN_02
Escherichia coli	562	PRJEB11886	340095	Proteobacteria	Gammaproteobacteria	5.17729	50.2	-	FAVX01	304	5643	5163	8/25/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3677955	GCA_900015945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/945/GCA_900015945.1_ED636_contigs	-	ED636
Escherichia coli	562	PRJEB12146	312072	Proteobacteria	Gammaproteobacteria	4.51792	50.8	-	FBSE01	58	4648	4389	2/13/16	2/25/17	Contig	CEBITEC	SAMEA3713633	GCA_900015955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/955/GCA_900015955.1_JF733	-	-
Streptococcus pneumoniae	1313	PRJNA378807	378807	Terrabacteria group	Firmicutes	2.20098	39.4	-	NAOL01	80	2377	2097	4/6/17	4/8/17	Scaffold	Shanghai Children's Hospital	SAMN06562550	GCA_002081465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/465/GCA_002081465.1_ASM208146v1	-	SPN_03
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.83028	52	-	CJHS01	151	5009	4582	3/21/15	2/27/17	Scaffold	SC	SAMEA2162017	GCA_001129325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/325/GCA_001129325.1_10562_2_60	-	MDUST370
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.92754	32.8	-	FGLZ01	62	3083	2895	2/10/16	3/6/17	Contig	SC	SAMEA1464508	GCA_900018315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/315/GCA_900018315.1_7521_5_89	-	st1460
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.89653	32.7	-	FGME01	95	3016	2847	2/10/16	3/6/17	Contig	SC	SAMEA1464618	GCA_900018325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/325/GCA_900018325.1_7521_5_92	-	st1465
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.55634	52.1	-	CJEM01	52	4693	4352	3/21/15	2/27/17	Scaffold	SC	SAMEA1972676	GCA_001129345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/345/GCA_001129345.1_10541_2_45	-	MDUST329
Streptococcus pneumoniae	1313	PRJNA378807	378807	Terrabacteria group	Firmicutes	2.06664	39.7	-	NANS01	61	2245	2045	4/6/17	4/8/17	Scaffold	Shanghai Children's Hospital	SAMN06562569	GCA_002081535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/081/535/GCA_002081535.1_ASM208153v1	-	SPN_22
Escherichia coli	562	PRJEB12203	338936	Proteobacteria	Gammaproteobacteria	5.18442	50.6	-	FBUQ01	135	5631	5160	8/15/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3715964	GCA_900015985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/985/GCA_900015985.1_M856_contigs	-	M856
Escherichia coli	562	PRJEB12203	338936	Proteobacteria	Gammaproteobacteria	5.12558	50.7	-	FBVD01	90	5526	5104	8/15/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3715965	GCA_900015995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/015/995/GCA_900015995.1_M858_contigs	-	M858
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.0214	39.7	-	NNBX01	94	2237	1989	8/11/17	8/15/17	Scaffold	National Institute for Communicable Diseases	SAMN04337297	GCA_002246915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/915/GCA_002246915.1_ASM224691v1	-	699-14
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.93728	52.1	-	CQHI01	46	5105	4843	3/22/15	2/27/17	Scaffold	SC	SAMEA1568498	GCA_001129385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/385/GCA_001129385.1_8490_2_56	-	CH13
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82938	32.7	-	FFXO01	61	2910	2772	2/10/16	3/5/17	Contig	SC	SAMEA1464616	GCA_900018685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/685/GCA_900018685.1_7554_6_68	-	st282
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.70277	32.7	-	FFYB01	37	2769	2646	2/10/16	3/5/17	Contig	SC	SAMEA1464437	GCA_900018695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/695/GCA_900018695.1_7748_6_3	-	st326
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70263	52.1	-	CJSG01	39	4859	4493	3/21/15	2/27/17	Scaffold	SC	SAMEA1903840	GCA_001129985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/985/GCA_001129985.1_9475_6_13	-	1021701
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.32591	41.1	-	NNBW01	932	2419	2153	8/11/17	8/15/17	Scaffold	National Institute for Communicable Diseases	SAMN04337302	GCA_002246925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/246/925/GCA_002246925.1_ASM224692v1	-	8227-15B
Escherichia coli	562	PRJEB12203	338936	Proteobacteria	Gammaproteobacteria	4.90416	50.7	-	FBUM01	42	5083	4777	8/15/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3715966	GCA_900016005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/005/GCA_900016005.1_M859_contigs	-	M859
Escherichia coli	562	PRJEB12203	338936	Proteobacteria	Gammaproteobacteria	5.06958	50.4	-	FBUY01	495	5355	4965	8/15/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3715970	GCA_900016035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/035/GCA_900016035.1_BCW5711_contigs	-	BCW5711
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.16431	40	-	NPJX01	202	2413	2137	8/22/17	8/24/17	Scaffold	National Institute for Communicable Diseases	SAMN04337305	GCA_002265095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/095/GCA_002265095.1_ASM226509v1	-	8788-22
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.97123	51.7	-	CJKC01	56	5164	4797	3/21/15	2/27/17	Scaffold	SC	SAMEA1929447	GCA_001130645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/645/GCA_001130645.1_10592_2_9	-	3723
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86213	32.7	-	FFYA01	47	2998	2822	2/10/16	3/5/17	Contig	SC	SAMEA1464699	GCA_900018705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/705/GCA_900018705.1_7554_6_89	-	st331
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.90199	32.7	-	FFYE01	54	3059	2880	2/10/16	3/5/17	Contig	SC	SAMEA1464300	GCA_900018715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/715/GCA_900018715.1_7554_6_92	-	st338
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.97049	52.1	-	CQGY01	54	5153	4874	3/22/15	2/27/17	Scaffold	SC	SAMEA1568496	GCA_001130925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/925/GCA_001130925.1_8490_2_77	-	CH34
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.21798	39.6	-	CPTW01	89	2459	2203	3/23/15	3/13/17	Scaffold	SC	SAMEA1408255	GCA_900005375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/005/375/GCA_900005375.1_7444_8_2	-	9512+07034
Escherichia coli	562	PRJEB12203	338936	Proteobacteria	Gammaproteobacteria	5.52355	50.5	-	FBUO01	188	6065	5512	8/15/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3715977	GCA_900016065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/065/GCA_900016065.1_ED363_contigs	-	ED363
Escherichia coli	562	PRJEB12203	338936	Proteobacteria	Gammaproteobacteria	5.57005	50.4	-	FBVF01	253	6221	5569	8/15/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3715976	GCA_900016075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/075/GCA_900016075.1_ED361_contigs	-	ED361
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08298	39.5	-	FDRW01	46	2280	2016	2/9/16	3/13/17	Scaffold	SC	SAMEA2239157	GCA_900016885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/885/GCA_900016885.1_11860_8_23	-	2842STDY5644539
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.91784	51.9	-	CJIV01	59	5133	4744	3/21/15	2/27/17	Scaffold	SC	SAMEA1929465	GCA_001131425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/425/GCA_001131425.1_10592_2_22	-	21801
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78883	32.7	-	FFYK01	51	2885	2739	2/10/16	3/5/17	Contig	SC	SAMEA1317449	GCA_900018725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/725/GCA_900018725.1_7414_7_51	-	st363
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83157	32.7	-	FFZT01	60	2925	2780	2/10/16	3/5/17	Contig	SC	SAMEA1317523	GCA_900018735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/735/GCA_900018735.1_7414_8_10	-	st522
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82638	52	-	CJFL01	58	5021	4653	3/21/15	2/27/17	Scaffold	SC	SAMEA2148078	GCA_001131505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/505/GCA_001131505.1_10561_2_36	-	H12ESR04893-001A
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0148	39.7	-	FDQY01	21	2253	2006	2/9/16	3/15/17	Scaffold	SC	SAMEA2239136	GCA_900016895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/895/GCA_900016895.1_11860_8_1	-	2842STDY5644518
Escherichia coli	562	PRJEB12203	338936	Proteobacteria	Gammaproteobacteria	5.54342	50.4	-	FBUX01	224	6086	5458	8/15/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3715978	GCA_900016085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/085/GCA_900016085.1_ED366_contigs	-	ED366
Escherichia coli	562	PRJEB12203	338936	Proteobacteria	Gammaproteobacteria	5.4181	50.5	-	FBUZ01	180	5953	5403	8/15/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3715980	GCA_900016095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/095/GCA_900016095.1_ED377_contigs	-	ED377
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10774	39.7	-	FDSP01	38	2348	2120	2/9/16	3/13/17	Scaffold	SC	SAMEA2239190	GCA_900016905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/905/GCA_900016905.1_11860_8_58	-	2842STDY5644572
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	5.06735	52.1	-	CQGK01	56	5283	5003	3/23/15	2/27/17	Scaffold	SC	SAMEA1568543	GCA_001131525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/525/GCA_001131525.1_8490_2_83	-	CH40
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.91528	32.7	-	FGCV01	69	3076	2894	2/10/16	3/5/17	Contig	SC	SAMEA1464666	GCA_900018745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/745/GCA_900018745.1_7712_8_70	-	st820
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83221	32.7	-	FGDA01	62	2930	2781	2/10/16	3/6/17	Contig	SC	SAMEA1317481	GCA_900018755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/755/GCA_900018755.1_7414_7_2	-	st11
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.85167	52	-	CIZH01	63	5068	4663	3/21/15	2/27/17	Scaffold	SC	SAMEA2150506	GCA_001131845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/131/845/GCA_001131845.1_10492_1_27	-	MDUST199
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08005	39.6	-	FDUF01	34	2297	2047	2/9/16	3/13/17	Scaffold	SC	SAMEA2239247	GCA_900016915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/915/GCA_900016915.1_11861_5_20	-	2842STDY5644630
Escherichia coli	562	PRJEB12203	338936	Proteobacteria	Gammaproteobacteria	5.37371	50.4	-	FBUU01	155	5887	5373	8/15/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3715981	GCA_900016115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/115/GCA_900016115.1_ED430_contigs	-	ED430
Escherichia coli	562	PRJEB12203	338936	Proteobacteria	Gammaproteobacteria	5.47917	50.4	-	FBUT01	160	6038	5526	8/15/16	3/2/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3715982	GCA_900016135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/135/GCA_900016135.1_ED444_contigs	-	ED444
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.97977	39.7	-	FDUL01	23	2197	1966	2/9/16	3/13/17	Scaffold	SC	SAMEA2239261	GCA_900016925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/925/GCA_900016925.1_11861_5_35	-	2842STDY5644644
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93253	51.8	-	CJUV01	58	5125	4751	3/21/15	2/27/17	Scaffold	SC	SAMEA2055643	GCA_001132005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/005/GCA_001132005.1_9870_8_33	-	2010-007462
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85466	32.7	-	FGDB01	89	3031	2862	2/10/16	3/6/17	Contig	SC	SAMEA1317478	GCA_900018765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/765/GCA_900018765.1_7414_7_5	-	st23
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.82384	32.7	-	FGDV01	37	2917	2761	2/10/16	3/6/17	Contig	SC	SAMEA1464240	GCA_900018775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/775/GCA_900018775.1_8728_5_19	-	st216
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74653	52.1	-	CJTX01	51	4911	4545	3/21/15	2/27/17	Scaffold	SC	SAMEA1903906	GCA_001132265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/265/GCA_001132265.1_9475_6_79	-	1031581
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06148	39.7	-	FDUO01	48	2280	2017	2/9/16	3/13/17	Scaffold	SC	SAMEA2239269	GCA_900016935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/935/GCA_900016935.1_11861_5_44	-	2842STDY5644652
Escherichia coli	562	PRJEB12203	338936	Proteobacteria	Gammaproteobacteria	5.07222	50.6	-	FBUS01	68	5313	4944	8/15/16	2/25/17	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3715967	GCA_900016365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/365/GCA_900016365.1_M884_contigs	-	M884
Escherichia coli	562	PRJEB12203	338936	Proteobacteria	Gammaproteobacteria	5.37939	50.4	-	FBUN01	176	-	-	8/15/16	8/15/16	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3715975	GCA_900016375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/375/GCA_900016375.1_ED360_contigs	-	ED360
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0549	39.7	-	FDWM01	29	2261	2027	2/9/16	3/8/17	Scaffold	SC	SAMEA2238325	GCA_900016945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/945/GCA_900016945.1_11860_4_52	-	2842STDY5643694
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.7221	52	-	CJOA01	51	4872	4513	3/21/15	2/27/17	Scaffold	SC	SAMEA1406352	GCA_001132285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/285/GCA_001132285.1_7468_7_67	-	IB5354
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8013	32.7	-	FFUV01	49	2893	2748	2/10/16	3/5/17	Contig	SC	SAMEA1464576	GCA_900019035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/035/GCA_900019035.1_7554_6_1	-	st105
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87255	32.7	-	FFUT01	96	3052	2889	2/10/16	3/5/17	Contig	SC	SAMEA1317577	GCA_900019045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/045/GCA_900019045.1_7414_7_4	-	st16
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69846	52.1	-	CJYQ01	45	4856	4501	3/21/15	2/27/17	Scaffold	SC	SAMEA2057368	GCA_001132605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/605/GCA_001132605.1_9953_5_71	-	LNT1374
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10442	39.6	-	FDWP01	33	2308	2051	2/9/16	3/13/17	Scaffold	SC	SAMEA2238332	GCA_900016955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/955/GCA_900016955.1_11860_4_59	-	2842STDY5643701
Escherichia coli	562	PRJEB12281	314066	Proteobacteria	Gammaproteobacteria	5.397	50.8	-	FBYD01	6	5695	5284	3/4/16	2/25/17	Contig	CHU BICHAT	SAMEA3724850	GCA_900041715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/715/GCA_900041715.1_NG-7574_Bell_ERRESI	-	-
Escherichia coli	562	PRJEB14085	324196	Proteobacteria	Gammaproteobacteria	4.50792	50.8	-	FLKR02	102	4693	4404	6/2/16	5/31/17	Contig	Centre for Food Safety	SAMEA3993564	GCA_900087565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/565/GCA_900087565.2_ASM90008756v2	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07224	39.7	-	FDXJ01	63	2301	2038	2/9/16	3/8/17	Scaffold	SC	SAMEA2238363	GCA_900016965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/965/GCA_900016965.1_11860_4_89	-	2842STDY5643732
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7195	52	-	CJHF01	56	4881	4518	3/21/15	2/27/17	Scaffold	SC	SAMEA2152574	GCA_001132705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/705/GCA_001132705.1_10562_2_44	-	MDUST290
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82876	32.7	-	FFVJ01	59	2926	2772	2/10/16	3/5/17	Contig	SC	SAMEA1317412	GCA_900019055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/055/GCA_900019055.1_7414_7_35	-	st85
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80129	32.7	-	FFUX01	44	2903	2747	2/10/16	3/5/17	Contig	SC	SAMEA1464654	GCA_900019065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/065/GCA_900019065.1_7554_6_20	-	st148
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73645	52	-	CJEW01	64	4895	4535	3/21/15	2/27/17	Scaffold	SC	SAMEA2154074	GCA_001132785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/785/GCA_001132785.1_10541_2_56	-	MDUST360
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.17434	39.6	-	FDXY01	51	2382	2117	2/9/16	3/13/17	Scaffold	SC	SAMEA2238386	GCA_900016975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/975/GCA_900016975.1_11860_5_17	-	2842STDY5643756
Escherichia coli	562	PRJEB13470	327540	Proteobacteria	Gammaproteobacteria	5.14794	50.4	-	FLKS01	95	5417	5087	7/1/16	2/25/17	Contig	JUSTUS LIEBIG UNIVERSITAT	SAMEA3980469	GCA_900087675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/675/GCA_900087675.1_RL158	-	-
Escherichia coli	562	PRJEB13470	327540	Proteobacteria	Gammaproteobacteria	5.16869	50.5	-	FLKU01	135	5487	5048	7/1/16	2/25/17	Contig	JUSTUS LIEBIG UNIVERSITAT	SAMEA3930541	GCA_900087705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/705/GCA_900087705.1_RL465	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10128	39.6	-	FDYM01	43	2332	2070	2/9/16	3/12/17	Scaffold	SC	SAMEA2238414	GCA_900016985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/985/GCA_900016985.1_11860_5_45	-	2842STDY5643784
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74669	52.1	-	CJEK01	58	4916	4546	3/21/15	2/27/17	Scaffold	SC	SAMEA2160220	GCA_001132925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/925/GCA_001132925.1_10541_2_49	-	MDUST340
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80196	32.7	-	FFVZ01	45	2892	2747	2/10/16	3/5/17	Contig	SC	SAMEA1317456	GCA_900019075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/075/GCA_900019075.1_7414_7_23	-	st65
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80145	32.7	-	FFVQ01	49	2894	2748	2/10/16	3/5/17	Contig	SC	SAMEA1464393	GCA_900019085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/085/GCA_900019085.1_7554_6_22	-	st164
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.66406	52	-	CJJQ01	45	4835	4467	3/21/15	2/27/17	Scaffold	SC	SAMEA1930197	GCA_001133025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/025/GCA_001133025.1_10592_2_56	-	E02-1963
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.97959	39.7	-	FDZG01	23	2186	1957	2/9/16	3/13/17	Scaffold	SC	SAMEA2238439	GCA_900016995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/995/GCA_900016995.1_11860_5_70	-	2842STDY5643809
Escherichia coli	562	PRJEB13470	327540	Proteobacteria	Gammaproteobacteria	5.45374	50.5	-	FLKV01	239	5860	5428	7/1/16	2/25/17	Contig	JUSTUS LIEBIG UNIVERSITAT	SAMEA3980467	GCA_900087745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/745/GCA_900087745.1_RL138	-	-
Escherichia coli	562	PRJEB13470	327540	Proteobacteria	Gammaproteobacteria	5.38413	50.4	-	FLKT01	181	5774	5335	7/1/16	2/25/17	Contig	JUSTUS LIEBIG UNIVERSITAT	SAMEA3980468	GCA_900087775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/087/775/GCA_900087775.1_RL145	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99141	39.8	-	1-Feb	51	2214	1932	2/9/16	3/13/17	Scaffold	SC	SAMEA2238553	GCA_900017005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/005/GCA_900017005.1_11860_6_87	-	2842STDY5643924
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72179	52	-	CJEE01	58	4888	4508	3/21/15	2/27/17	Scaffold	SC	SAMEA2162580	GCA_001133065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/065/GCA_001133065.1_10541_2_35	-	MDUST311
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.97123	32.6	-	FFWC01	60	3129	2945	2/10/16	3/5/17	Contig	SC	SAMEA1464205	GCA_900019095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/095/GCA_900019095.1_7554_6_4	-	st112
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80176	32.7	-	FFWE01	53	2906	2752	2/10/16	3/5/17	Contig	SC	SAMEA1317358	GCA_900019105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/105/GCA_900019105.1_7414_7_14	-	st41
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72155	52	-	CIZD01	53	4872	4511	3/21/15	2/27/17	Scaffold	SC	SAMEA2149594	GCA_001133105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/105/GCA_001133105.1_10492_1_20	-	MDUST169
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.03629	39.6	-	FEEP01	23	2240	2013	2/9/16	3/13/17	Scaffold	SC	SAMEA2238694	GCA_900017015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/015/GCA_900017015.1_11861_2_34	-	2842STDY5644067
Escherichia coli	562	PRJEB14244	336286	Proteobacteria	Gammaproteobacteria	5.22003	50.6	-	FLMT01	75	5498	5095	8/3/16	5/31/17	Contig	IFR	SAMEA4022053	GCA_900088905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/905/GCA_900088905.1_ASM90008890v1	-	-
Escherichia coli	562	PRJEB14244	336286	Proteobacteria	Gammaproteobacteria	5.43556	50.5	-	FLMS01	76	5713	5281	8/3/16	5/31/17	Contig	IFR	SAMEA4022054	GCA_900088915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/915/GCA_900088915.1_ASM90008891v1	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.97046	39.8	-	FJAA01	28	2173	1937	2/20/16	3/13/17	Scaffold	SC	SAMEA2383274	GCA_900017025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/025/GCA_900017025.1_12754_4_64	-	2842STDY5753821
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71996	52	-	CIXK01	55	4879	4503	3/21/15	2/27/17	Scaffold	SC	SAMEA2072652	GCA_001133225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/225/GCA_001133225.1_10349_1_49	-	ERL0982
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78812	32.7	-	FFWI01	52	2880	2732	2/10/16	3/5/17	Contig	SC	SAMEA1317330	GCA_900019115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/115/GCA_900019115.1_7414_7_42	-	st95
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83262	32.7	-	FFWT01	65	2929	2784	2/10/16	3/5/17	Contig	SC	SAMEA1464718	GCA_900019125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/125/GCA_900019125.1_7554_6_38	-	st194
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7364	52	-	CJAQ01	61	4890	4536	3/21/15	2/27/17	Scaffold	SC	SAMEA2145285	GCA_001133305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/305/GCA_001133305.1_10492_1_66	-	MDUST361
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07963	39.7	-	FDHK01	17	2296	2078	2/6/16	3/5/17	Scaffold	SC	SAMEA2382804	GCA_900017165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/165/GCA_900017165.1_12718_4_69	-	2842STDY5753346
Escherichia coli	562	PRJEB14244	336286	Proteobacteria	Gammaproteobacteria	5.23344	50.5	-	FLMX01	235	5550	5096	8/3/16	5/31/17	Contig	IFR	SAMEA4022051	GCA_900088965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/965/GCA_900088965.1_ASM90008896v1	-	-
Escherichia coli	562	PRJEB14244	336286	Proteobacteria	Gammaproteobacteria	5.18765	50.6	-	FLMV01	65	5471	4905	8/3/16	5/31/17	Contig	IFR	SAMEA4022052	GCA_900089055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/055/GCA_900089055.1_ASM90008905v1	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05648	39.5	-	FEBG01	26	2272	2036	2/9/16	3/5/17	Scaffold	SC	SAMEA2238539	GCA_900017175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/175/GCA_900017175.1_11860_6_73	-	2842STDY5643910
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.93093	51.8	-	CEZA01	69	5111	4734	3/10/15	2/27/17	Scaffold	SC	SAMEA1406339	GCA_001133585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/585/GCA_001133585.1_7468_7_55	-	IB5341
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83293	32.8	-	FGCS01	55	2939	2784	2/10/16	3/6/17	Contig	SC	SAMEA1464607	GCA_900019135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/135/GCA_900019135.1_7712_8_67	-	st810
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84481	32.7	-	FGFG01	23	2976	2860	2/10/16	3/5/17	Contig	SC	SAMEA1464480	GCA_900019145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/145/GCA_900019145.1_7712_8_7	-	st659
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.84577	52	-	CJAI01	56	5042	4670	3/21/15	2/27/17	Scaffold	SC	SAMEA2149341	GCA_001133645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/645/GCA_001133645.1_10492_1_55	-	MDUST270
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98081	39.7	-	FEHN01	27	2183	1954	2/9/16	3/13/17	Scaffold	SC	SAMEA2383095	GCA_900017185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/185/GCA_900017185.1_12754_2_75	-	2842STDY5753640
Escherichia coli	562	PRJEB14379	325749	Proteobacteria	Gammaproteobacteria	5.66837	50.2	-	FLOA01	455	5946	5580	6/15/16	2/25/17	Contig	Centre for Food Safety	SAMEA4031745	GCA_900089795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/795/GCA_900089795.1_CQ09	-	-
Escherichia coli	562	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.3854	57.4	-	FLWH01	35	5405	5150	9/24/16	2/25/17	Contig	SC	SAMEA3531745	GCA_900093145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/145/GCA_900093145.1_18090_7_42	-	PB486
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.9926	39.8	-	FEHU01	53	2193	1933	2/9/16	3/13/17	Scaffold	SC	SAMEA2383102	GCA_900017195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/195/GCA_900017195.1_12754_2_82	-	2842STDY5753647
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72478	52	-	CJEX01	58	4874	4516	3/21/15	2/27/17	Scaffold	SC	SAMEA2157713	GCA_001133765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/765/GCA_001133765.1_10541_2_9	-	MDUST180
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83122	32.7	-	FGFK01	43	2935	2778	2/10/16	3/5/17	Contig	SC	SAMEA1464268	GCA_900019155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/155/GCA_900019155.1_7712_8_31	-	st703
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87133	32.7	-	FGFM01	77	3034	2834	2/10/16	3/5/17	Contig	SC	SAMEA1464273	GCA_900019165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/165/GCA_900019165.1_7712_8_34	-	st711
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82688	52	-	CJAZ01	55	5023	4652	3/21/15	2/27/17	Scaffold	SC	SAMEA2162780	GCA_001133925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/925/GCA_001133925.1_10492_1_81	-	MDUST406
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99283	39.8	-	FELJ01	44	2197	1927	2/9/16	3/13/17	Scaffold	SC	SAMEA2383195	GCA_900017205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/205/GCA_900017205.1_12754_3_80	-	2842STDY5753741
Escherichia coli	562	PRJEB15332	352815	Proteobacteria	Gammaproteobacteria	4.45955	50.8	-	FMKC01	88	4597	4330	11/7/16	2/26/17	Contig	CEBITEC	SAMEA4462042	GCA_900097005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/005/GCA_900097005.1_K802	-	-
Escherichia coli	562	PRJEB11503	368825	Proteobacteria	Gammaproteobacteria	4.91047	50.7	-	FUVF01	310	5256	4829	2/17/17	2/23/17	Contig	IFH_MS	SAMEA4470456	GCA_900108745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/108/745/GCA_900108745.1_PEI-B-P-19	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.19591	39.6	-	FDRU01	70	2445	2183	2/9/16	3/15/17	Scaffold	SC	SAMEA2239175	GCA_900017275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/275/GCA_900017275.1_11860_8_42	-	2842STDY5644557
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72215	52	-	CJEL01	55	4889	4525	3/21/15	2/27/17	Scaffold	SC	SAMEA2144461	GCA_001134065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/065/GCA_001134065.1_10541_2_42	-	MDUST323
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80601	32.7	-	FGFL01	39	2900	2752	2/10/16	3/5/17	Contig	SC	SAMEA1464303	GCA_900019175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/175/GCA_900019175.1_7712_8_43	-	st754
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.91251	32.6	-	FGHG01	67	3056	2861	2/10/16	3/5/17	Contig	SC	SAMEA1317320	GCA_900019185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/185/GCA_900019185.1_7414_8_93	-	st973
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72004	52	-	CIXT01	56	4871	4518	3/21/15	2/27/17	Scaffold	SC	SAMEA2072660	GCA_001134125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/125/GCA_001134125.1_10349_1_62	-	ERL10492
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15155	39.6	-	FDSS01	67	2391	2121	2/9/16	3/15/17	Scaffold	SC	SAMEA2239194	GCA_900017285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/285/GCA_900017285.1_11860_8_62	-	2842STDY5644576
Escherichia coli	562	PRJEB15032	337923	Proteobacteria	Gammaproteobacteria	5.15114	50.4	-	FQSQ01	70	5356	5003	11/26/16	5/31/17	Contig	Department of Biosecurity PCL3	SAMEA4389173	GCA_900128765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/765/GCA_900128765.1_ASM90012876v1	-	DBS1
Escherichia coli	562	PRJEB11777	313756	Proteobacteria	Gammaproteobacteria	4.93454	50.5	-	FUEI01	167	5133	4766	2/1/17	2/26/17	Contig	INSTITUTO NACIONAL DE SALUD	SAMEA45274168	GCA_900156555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/156/555/GCA_900156555.1_RCEC007_PRJEB11777_wgs.embl.gz	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07573	39.6	-	FDUC01	44	2275	2042	2/9/16	3/13/17	Scaffold	SC	SAMEA2239241	GCA_900017295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/295/GCA_900017295.1_11861_5_14	-	2842STDY5644624
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.76247	52	-	CJCV01	48	4918	4550	3/21/15	2/27/17	Scaffold	SC	SAMEA2159038	GCA_001134165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/165/GCA_001134165.1_10493_1_8	-	MDUST126
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8358	32.7	-	FGHI01	59	2935	2783	2/10/16	3/5/17	Contig	SC	SAMEA1464269	GCA_900019195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/195/GCA_900019195.1_7521_5_4	-	st987
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81116	32.7	-	FGLW01	46	2903	2753	2/10/16	3/6/17	Contig	SC	SAMEA1464403	GCA_900019205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/205/GCA_900019205.1_7521_5_83	-	st1449
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82715	52	-	CIXN01	55	5024	4630	3/21/15	2/27/17	Scaffold	SC	SAMEA2072656	GCA_001134205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/205/GCA_001134205.1_10349_1_56	-	ERL102461
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04009	39.6	-	FDUT01	28	2238	2004	2/9/16	3/5/17	Scaffold	SC	SAMEA2239276	GCA_900017305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/305/GCA_900017305.1_11861_5_51	-	2842STDY5644660
Escherichia coli	562	PRJEB15588	357209	Proteobacteria	Gammaproteobacteria	5.26355	50.9	-	FUVQ01	472	5443	5108	2/17/17	2/23/17	Contig	Kalmar county hospital	SAMEA4483556	GCA_900166715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/715/GCA_900166715.1_Isolate_16	-	-
Escherichia coli	562	PRJEB15588	357209	Proteobacteria	Gammaproteobacteria	5.30574	50.9	-	FUVR01	616	5440	5109	2/17/17	2/23/17	Contig	Kalmar county hospital	SAMEA4483554	GCA_900166745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/745/GCA_900166745.1_Isolate_14	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06618	39.6	-	FDVA01	20	2261	2028	2/9/16	3/6/17	Scaffold	SC	SAMEA2239292	GCA_900017315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/315/GCA_900017315.1_11861_5_67	-	2842STDY5644676
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.68639	52.1	-	CJAC01	56	4830	4483	3/21/15	2/27/17	Scaffold	SC	SAMEA2159527	GCA_001134225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/225/GCA_001134225.1_10492_1_53	-	MDUST267
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86463	32.7	-	FFPJ01	58	2997	2820	2/9/16	3/5/17	Contig	SC	SAMEA1317519	GCA_900020215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/215/GCA_900020215.1_7414_8_40	-	st612
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.789	32.7	-	FFPK01	48	2870	2747	2/9/16	3/5/17	Contig	SC	SAMEA1469571	GCA_900020225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/225/GCA_900020225.1_7480_7_22	-	st1162
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74146	52	-	CJEY01	71	4885	4525	3/21/15	2/27/17	Scaffold	SC	SAMEA2162164	GCA_001134345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/345/GCA_001134345.1_10561_2_1	-	np4
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11569	39.6	-	FDUV01	53	2347	2082	2/9/16	3/5/17	Scaffold	SC	SAMEA2239279	GCA_900017325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/325/GCA_900017325.1_11861_5_54	-	2842STDY5644663
Escherichia coli	562	PRJEB20024	386786	Proteobacteria	Gammaproteobacteria	5.20819	50.6	-	FWEN01	214	5407	5050	5/16/17	8/7/17	Contig	Kalmar county hospital	SAMEA103915298	GCA_900169595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/595/GCA_900169595.1_15.TR.026_26OXA_OXA-48	-	-
Escherichia coli	562	PRJEB20427	382909	Proteobacteria	Gammaproteobacteria	4.71465	50.8	-	FXBK01	2	4866	4532	4/21/17	5/1/17	Contig	DOE - JOINT GENOME INSTITUTE	SAMN04487933	GCA_900177355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/177/355/GCA_900177355.1_IMG-taxon_2608642167_annotated_assembly	-	ATCC 15597
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02318	39.7	-	FDVG01	50	2215	1970	2/9/16	3/6/17	Scaffold	SC	SAMEA2239298	GCA_900017335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/335/GCA_900017335.1_11861_5_73	-	2842STDY5644682
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71776	52.1	-	CJYN01	41	4876	4515	3/21/15	2/27/17	Scaffold	SC	SAMEA2056533	GCA_001134365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/365/GCA_001134365.1_9953_5_69	-	LNT1365
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86698	32.7	-	FFPL01	51	3005	2825	2/9/16	3/5/17	Contig	SC	SAMEA1464249	GCA_900020235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/235/GCA_900020235.1_7521_5_54	-	st1376
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82747	32.7	-	FFZV01	91	2997	2843	2/10/16	3/5/17	Contig	SC	SAMEA1317385	GCA_900020265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/265/GCA_900020265.1_7414_8_5	-	st509
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93643	51.8	-	CJWM01	69	5156	4748	3/21/15	2/27/17	Scaffold	SC	SAMEA2058615	GCA_001134405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/405/GCA_001134405.1_9870_8_88	-	2010-006045
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06533	39.6	-	FDWG01	26	2270	2038	2/9/16	3/13/17	Scaffold	SC	SAMEA2238315	GCA_900017345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/345/GCA_900017345.1_11860_4_41	-	2842STDY5643684
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.09417	50.6	-	FZFY01	786	-	-	9/7/17	9/23/17	Contig	Ausgem	SAMEA104140448	GCA_900195305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/305/GCA_900195305.1_F1_4A	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.54608	50.2	-	FZFZ01	573	-	-	9/7/17	9/23/17	Contig	Ausgem	SAMEA104140460	GCA_900195325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/325/GCA_900195325.1_F1_25A	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.101	39.7	-	FDWK01	27	2306	2053	2/9/16	3/13/17	Scaffold	SC	SAMEA2238321	GCA_900017355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/355/GCA_900017355.1_11860_4_48	-	2842STDY5643690
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73628	52	-	CJEC01	58	4885	4542	3/21/15	2/27/17	Scaffold	SC	SAMEA1964467	GCA_001134605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/605/GCA_001134605.1_10541_2_31	-	MDUST305
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78948	32.7	-	FGCX01	45	2880	2730	2/10/16	3/5/17	Contig	SC	SAMEA1464202	GCA_900020275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/275/GCA_900020275.1_7712_8_73	-	st825
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79711	32.7	-	FGCW01	34	2894	2746	2/10/16	3/6/17	Contig	SC	SAMEA1464221	GCA_900020285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/285/GCA_900020285.1_7712_8_76	-	st831
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72189	52	-	CJBL01	52	4879	4518	3/21/15	2/27/17	Scaffold	SC	SAMEA1965464	GCA_001135005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/005/GCA_001135005.1_10493_1_23	-	MDUST163
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07345	39.6	-	FDWN01	39	2265	2014	2/9/16	3/6/17	Scaffold	SC	SAMEA2238329	GCA_900017365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/365/GCA_900017365.1_11860_4_56	-	2842STDY5643698
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.3864	50.4	-	FZFR01	496	-	-	9/6/17	9/23/17	Contig	Ausgem	SAMEA104140472	GCA_900195335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/335/GCA_900195335.1_F1_400D	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.28249	50.4	-	FZEX01	193	-	-	9/6/17	9/23/17	Contig	Ausgem	SAMEA104140457	GCA_900195345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/345/GCA_900195345.1_F1_22A	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02067	39.7	-	FDWO01	27	2243	2008	2/9/16	3/5/17	Scaffold	SC	SAMEA2238331	GCA_900017375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/375/GCA_900017375.1_11860_4_58	-	2842STDY5643700
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74847	52.1	-	CJCN01	68	4912	4538	3/21/15	2/27/17	Scaffold	SC	SAMEA2154829	GCA_001135425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/425/GCA_001135425.1_10493_1_73	-	MDUST336
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.82035	32.7	-	FGDL01	29	2915	2767	2/10/16	3/5/17	Contig	SC	SAMEA1317556	GCA_900020295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/295/GCA_900020295.1_8728_5_18	-	st103
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83649	32.7	-	FGEX01	55	2933	2783	2/10/16	3/5/17	Contig	SC	SAMEA1317359	GCA_900020305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/305/GCA_900020305.1_7414_8_22	-	st555
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	5.02797	52.1	-	CQGN01	69	5227	4939	3/22/15	2/27/17	Scaffold	SC	SAMEA1568550	GCA_001135785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/785/GCA_001135785.1_8490_2_63	-	CH20
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01753	39.7	-	FDZO01	28	2219	2004	2/9/16	3/13/17	Scaffold	SC	SAMEA2238459	GCA_900017385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/385/GCA_900017385.1_11860_5_89	-	2842STDY5643829
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.33236	50.4	-	FZFN01	601	-	-	9/7/17	9/23/17	Contig	Ausgem	SAMEA104140463	GCA_900195365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/365/GCA_900195365.1_F1_27D	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.89675	50.8	-	FZFJ01	329	-	-	9/7/17	9/23/17	Contig	Ausgem	SAMEA104140467	GCA_900195375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/375/GCA_900195375.1_F1_365A	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08653	39.6	-	FEBN01	38	2274	2044	2/9/16	3/13/17	Scaffold	SC	SAMEA2238549	GCA_900017395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/395/GCA_900017395.1_11860_6_83	-	2842STDY5643920
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72874	52	-	CJOU01	48	4894	4535	3/21/15	2/27/17	Scaffold	SC	SAMEA1572844	GCA_001135825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/135/825/GCA_001135825.1_8447_8_26	-	MDUST98
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80885	32.7	-	FGEZ01	75	2897	2755	2/10/16	3/5/17	Contig	SC	SAMEA1317308	GCA_900020315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/315/GCA_900020315.1_7414_8_27	-	st567
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.834	32.7	-	FGFF01	51	2934	2782	2/10/16	3/5/17	Contig	SC	SAMEA1464495	GCA_900020325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/325/GCA_900020325.1_7712_8_13	-	st673
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73541	52	-	CJCG01	57	4887	4538	3/21/15	2/27/17	Scaffold	SC	SAMEA2162742	GCA_001136005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/005/GCA_001136005.1_10493_1_58	-	MDUST288
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08811	39.7	-	FECB01	36	2313	2092	2/9/16	3/13/17	Scaffold	SC	SAMEA2238569	GCA_900017405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/405/GCA_900017405.1_11861_1_6	-	2842STDY5643941
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.9618	50.7	-	FZFH01	300	-	-	9/6/17	9/23/17	Contig	Ausgem	SAMEA104140464	GCA_900195385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/385/GCA_900195385.1_F1_28D	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.34804	50.4	-	FZFD01	297	-	-	9/6/17	9/23/17	Contig	Ausgem	SAMEA104140458	GCA_900195415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/415/GCA_900195415.1_F1_23E	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05366	39.6	-	FECG01	32	2254	2030	2/9/16	3/13/17	Scaffold	SC	SAMEA2238578	GCA_900017415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/415/GCA_900017415.1_11861_1_16	-	2842STDY5643950
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB1252	205706	Proteobacteria	Gammaproteobacteria	4.71351	52	-	CJRZ01	49	4873	4512	3/21/15	2/27/17	Scaffold	SC	SAMEA1903755	GCA_001136385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/385/GCA_001136385.1_9475_4_51	-	C3891
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77748	32.7	-	FGGQ01	67	2868	2732	2/10/16	3/5/17	Contig	SC	SAMEA1317426	GCA_900020335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/335/GCA_900020335.1_7414_8_68	-	st911
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.88645	32.7	-	FGHK01	46	3042	2924	2/10/16	3/5/17	Contig	SC	SAMEA1464259	GCA_900020355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/355/GCA_900020355.1_7521_5_5	-	st988
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.72319	52	-	CJOL01	44	4884	4526	3/21/15	2/27/17	Scaffold	SC	SAMEA1406345	GCA_001136805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/805/GCA_001136805.1_7468_7_90	-	IB5380
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11203	39.6	-	FEDV01	39	2331	2082	2/9/16	3/13/17	Scaffold	SC	SAMEA2383272	GCA_900017425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/425/GCA_900017425.1_12754_4_62	-	2842STDY5753819
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.89865	50.8	-	FZFS01	324	-	-	9/6/17	9/23/17	Contig	Ausgem	SAMEA104140468	GCA_900195425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/425/GCA_900195425.1_F1_365C	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.21736	50.2	-	FZGH01	220	-	-	9/6/17	9/23/17	Contig	Ausgem	SAMEA104140459	GCA_900195435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/435/GCA_900195435.1_F1_24D	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.16724	39.6	-	FCPY01	50	2383	2122	2/6/16	3/8/17	Scaffold	SC	SAMEA2238759	GCA_900017435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/435/GCA_900017435.1_11893_1_2	-	2842STDY5644133
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72284	52	-	CIZJ01	53	4880	4510	3/21/15	2/27/17	Scaffold	SC	SAMEA2159894	GCA_001137205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/205/GCA_001137205.1_10492_1_28	-	MDUST200
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87368	32.7	-	FGHN01	63	2991	2831	2/10/16	3/5/17	Contig	SC	SAMEA1464302	GCA_900020365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/365/GCA_900020365.1_7521_5_9	-	st997
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79145	32.7	-	FGIC01	47	2911	2733	2/10/16	3/5/17	Contig	SC	SAMEA1464597	GCA_900020375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/375/GCA_900020375.1_7521_5_32	-	st1059
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.59481	52.2	-	CJXO01	52	4735	4397	3/21/15	2/27/17	Scaffold	SC	SAMEA2057251	GCA_001137305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/305/GCA_001137305.1_9953_5_38	-	A363
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.97969	39.8	-	FCPM01	22	2187	1962	2/6/16	3/13/17	Scaffold	SC	SAMEA2238761	GCA_900017445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/445/GCA_900017445.1_11893_1_4	-	2842STDY5644135
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.39995	50.5	-	FZFQ01	617	-	-	9/7/17	9/23/17	Contig	Ausgem	SAMEA104140470	GCA_900195455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/455/GCA_900195455.1_F1_367D	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.99772	50.7	-	FZGB01	404	-	-	9/6/17	9/23/17	Contig	Ausgem	SAMEA104140482	GCA_900195465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/465/GCA_900195465.1_F1_403E	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07321	39.7	-	FEHL01	48	2286	2024	2/9/16	3/13/17	Scaffold	SC	SAMEA2383093	GCA_900017455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/455/GCA_900017455.1_12754_2_73	-	2842STDY5753638
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71943	52	-	CIWV01	54	4865	4508	3/21/15	2/27/17	Scaffold	SC	SAMEA2072901	GCA_001137405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/405/GCA_001137405.1_10349_1_35	-	ERL082408
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83136	32.7	-	FGIS01	86	2931	2770	2/10/16	3/6/17	Contig	SC	SAMEA1469677	GCA_900020385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/385/GCA_900020385.1_7480_7_9	-	st1134
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82225	32.7	-	FGKC01	90	2912	2759	2/10/16	3/5/17	Contig	SC	SAMEA1469692	GCA_900020405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/405/GCA_900020405.1_7480_7_60	-	st1277
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70224	52.1	-	CJCO01	54	4854	4493	3/21/15	2/27/17	Scaffold	SC	SAMEA2155025	GCA_001137605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/605/GCA_001137605.1_10493_1_74	-	MDUST339
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.18016	39.7	-	FEEI01	42	2410	2157	2/9/16	3/13/17	Scaffold	SC	SAMEA2238679	GCA_900017725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/725/GCA_900017725.1_11861_2_18	-	2842STDY5644052
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.92223	50.7	-	FZGD01	500	-	-	9/7/17	9/23/17	Contig	Ausgem	SAMEA104140478	GCA_900195495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/495/GCA_900195495.1_F1_402D	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.79905	50.7	-	FZFV01	307	-	-	9/6/17	9/23/17	Contig	Ausgem	SAMEA104140451	GCA_900195505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/505/GCA_900195505.1_F1_5A	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07151	39.6	-	FDRM01	40	2269	2022	2/9/16	3/13/17	Scaffold	SC	SAMEA2239130	GCA_900017785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/785/GCA_900017785.1_11860_7_91	-	2842STDY5644512
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93254	51.8	-	CJVV01	76	5129	4742	3/21/15	2/27/17	Scaffold	SC	SAMEA2055773	GCA_001137705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/705/GCA_001137705.1_9870_8_66	-	BC2011-1461
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84025	32.7	-	FGKB01	56	2952	2810	2/10/16	3/6/17	Contig	SC	SAMEA1469646	GCA_900020415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/415/GCA_900020415.1_7480_7_62	-	st1281
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78714	32.7	-	FGKG01	48	2876	2731	2/10/16	3/5/17	Contig	SC	SAMEA1469604	GCA_900020425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/425/GCA_900020425.1_7480_7_66	-	st1286
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.9787	52.1	-	CQGJ01	56	5156	4884	3/23/15	2/27/17	Scaffold	SC	SAMEA1568515	GCA_001137885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/137/885/GCA_001137885.1_8490_2_64	-	CH21
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01485	39.8	-	FDSK01	25	2245	2010	2/9/16	3/15/17	Scaffold	SC	SAMEA2239183	GCA_900017795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/795/GCA_900017795.1_11860_8_51	-	2842STDY5644565
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.59728	50.9	-	FZEV01	111	-	-	9/7/17	9/23/17	Contig	Ausgem	SAMEA104140443	GCA_900195515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/515/GCA_900195515.1_F1_1A	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.9081	50.4	-	FZFW01	506	-	-	9/7/17	9/23/17	Contig	Ausgem	SAMEA104140474	GCA_900195525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/525/GCA_900195525.1_F1_401B	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04371	39.6	-	FDSZ01	46	2211	1974	2/9/16	3/12/17	Scaffold	SC	SAMEA2239206	GCA_900017805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/805/GCA_900017805.1_11860_8_74	-	2842STDY5644588
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72167	52	-	CJFS01	55	4888	4508	3/21/15	2/27/17	Scaffold	SC	SAMEA2163486	GCA_001138085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/085/GCA_001138085.1_10561_2_46	-	np88
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.90253	32.7	-	FGMW01	54	3018	2859	2/10/16	3/5/17	Contig	SC	SAMEA1464270	GCA_900020435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/435/GCA_900020435.1_7521_6_22	-	st1527
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87788	32.7	-	FGNQ01	58	3020	2832	2/10/16	3/5/17	Contig	SC	SAMEA1464275	GCA_900020445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/445/GCA_900020445.1_7521_6_48	-	st1607
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72346	52	-	CIYC01	53	4911	4503	3/21/15	2/27/17	Scaffold	SC	SAMEA2072818	GCA_001138145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/145/GCA_001138145.1_10349_1_72	-	ERL11877
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12338	39.6	-	FDSY01	40	2338	2092	2/9/16	3/13/17	Scaffold	SC	SAMEA2239205	GCA_900017815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/815/GCA_900017815.1_11860_8_73	-	2842STDY5644587
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.1286	50.6	-	FZFB01	316	-	-	9/6/17	9/23/17	Contig	Ausgem	SAMEA104140462	GCA_900195545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/545/GCA_900195545.1_F1_26B	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.41019	50.7	-	FZEY01	396	-	-	9/7/17	9/23/17	Contig	Ausgem	SAMEA104140447	GCA_900195565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/565/GCA_900195565.1_F1_3D	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10624	39.6	-	FDVK01	53	2306	2048	2/9/16	3/13/17	Scaffold	SC	SAMEA2238278	GCA_900017825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/825/GCA_900017825.1_11860_4_2	-	2842STDY5643647
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74499	52.1	-	CJTF01	46	4916	4548	3/21/15	2/27/17	Scaffold	SC	SAMEA1903877	GCA_001138245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/245/GCA_001138245.1_9475_6_52	-	1022401
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85682	32.7	-	FGOB01	19	2983	2864	2/10/16	3/5/17	Contig	SC	SAMEA1464719	GCA_900020455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/455/GCA_900020455.1_7521_6_65	-	st1664
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82184	32.7	-	FGPU01	54	2913	2761	2/10/16	3/6/17	Contig	SC	SAMEA1464233	GCA_900020465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/465/GCA_900020465.1_7521_5_11	-	st999
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72262	52	-	CJDM01	50	4896	4526	3/21/15	2/27/17	Scaffold	SC	SAMEA2154281	GCA_001138305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/305/GCA_001138305.1_10541_2_16	-	MDUST210
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12829	39.6	-	FDWJ01	42	2376	2131	2/9/16	3/13/17	Scaffold	SC	SAMEA2238320	GCA_900017835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/835/GCA_900017835.1_11860_4_47	-	2842STDY5643689
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.89785	50.8	-	FZEU01	551	-	-	9/6/17	9/23/17	Contig	Ausgem	SAMEA104140444	GCA_900195585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/585/GCA_900195585.1_F1_1C	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.79197	50.7	-	FZFC01	346	-	-	9/7/17	9/23/17	Contig	Ausgem	SAMEA104140465	GCA_900195595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/595/GCA_900195595.1_F1_29C	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01477	39.8	-	FDXB01	24	2246	1983	2/9/16	3/13/17	Scaffold	SC	SAMEA2238354	GCA_900017845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/845/GCA_900017845.1_11860_4_81	-	2842STDY5643723
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3164	204701	Proteobacteria	Gammaproteobacteria	4.9308	51.8	-	CJRK01	51	5114	4749	3/21/15	2/27/17	Scaffold	SC	SAMEA1572047	GCA_001138325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/325/GCA_001138325.1_8525_3_54	-	Ke475
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83472	32.7	-	FGPV01	50	2928	2778	2/10/16	3/5/17	Contig	SC	SAMEA1464677	GCA_900020475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/475/GCA_900020475.1_7521_5_28	-	st1039
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77082	32.7	-	FGQA01	13	2873	2724	2/10/16	3/5/17	Contig	SC	SAMEA1464707	GCA_900020485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/485/GCA_900020485.1_7521_5_36	-	st1070
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73875	52.1	-	CILE01	63	4936	4567	3/21/15	2/27/17	Scaffold	SC	SAMEA2156315	GCA_001138365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/365/GCA_001138365.1_10492_1_32	-	MDUST217
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99222	39.7	-	FDXX01	23	2185	1970	2/9/16	3/13/17	Scaffold	SC	SAMEA2238383	GCA_900017855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/855/GCA_900017855.1_11860_5_14	-	2842STDY5643753
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.0496	50.7	-	FZGE01	354	-	-	9/6/17	9/23/17	Contig	Ausgem	SAMEA104140473	GCA_900195605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/605/GCA_900195605.1_F1_401A	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.99661	50.7	-	FZFF01	228	-	-	9/7/17	9/23/17	Contig	Ausgem	SAMEA104140481	GCA_900195625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/625/GCA_900195625.1_F1_403D	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98351	39.7	-	FDXV01	25	2186	1970	2/9/16	3/13/17	Scaffold	SC	SAMEA2238380	GCA_900017865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/865/GCA_900017865.1_11860_5_11	-	2842STDY5643750
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74379	52.1	-	CIVP01	46	4915	4568	3/21/15	2/27/17	Scaffold	SC	SAMEA2066531	GCA_001138465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/465/GCA_001138465.1_10209_5_47	-	UI2591
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86528	32.7	-	FFZA01	45	3002	2830	2/10/16	3/5/17	Contig	SC	SAMEA1317458	GCA_900022575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/575/GCA_900022575.1_7414_7_73	-	st428
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80161	32.7	-	FGBC01	50	2884	2751	2/10/16	3/5/17	Contig	SC	SAMEA1464399	GCA_900022595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/595/GCA_900022595.1_7712_8_5	-	st651
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93389	51.8	-	CJMZ01	53	5130	4751	3/21/15	2/27/17	Scaffold	SC	SAMEA2143996	GCA_001138705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/705/GCA_001138705.1_10608_1_3	-	2008-007203
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12115	39.6	-	FEBC01	39	2324	2093	2/9/16	3/13/17	Scaffold	SC	SAMEA2238530	GCA_900017875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/875/GCA_900017875.1_11860_6_64	-	2842STDY5643901
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.01708	50.7	-	FZGC01	364	-	-	9/6/17	9/23/17	Contig	Ausgem	SAMEA104140475	GCA_900195645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/645/GCA_900195645.1_F1_401E	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.98951	50.6	-	FZGG01	555	-	-	9/7/17	9/23/17	Contig	Ausgem	SAMEA104140477	GCA_900195655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/655/GCA_900195655.1_F1_402C	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08392	39.6	-	FECY01	37	2243	2019	2/9/16	3/13/17	Scaffold	SC	SAMEA2238608	GCA_900017885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/885/GCA_900017885.1_11861_1_46	-	2842STDY5643980
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70376	52.1	-	CJQS01	41	4853	4497	3/21/15	2/27/17	Scaffold	SC	SAMEA1572815	GCA_001138725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/725/GCA_001138725.1_8490_6_65	-	MDUST65
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82115	32.7	-	FGDN01	58	2915	2764	2/10/16	3/5/17	Contig	SC	SAMEA1464283	GCA_900022605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/605/GCA_900022605.1_7554_6_9	-	st121
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80232	32.7	-	FGEJ01	46	2891	2744	2/10/16	3/6/17	Contig	SC	SAMEA1317416	GCA_900022615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/615/GCA_900022615.1_7414_7_59	-	st401
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72817	52	-	CJCR01	57	4880	4524	3/21/15	2/27/17	Scaffold	SC	SAMEA2143104	GCA_001138885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/885/GCA_001138885.1_10493_1_78	-	MDUST358
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01408	39.8	-	FEDI01	24	2237	2008	2/9/16	3/6/17	Scaffold	SC	SAMEA2238627	GCA_900017895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/895/GCA_900017895.1_11861_1_65	-	2842STDY5643999
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.6119	50.3	-	FZFK01	537	-	-	9/7/17	9/23/17	Contig	Ausgem	SAMEA104140483	GCA_900195665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/665/GCA_900195665.1_F1_404A	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.88601	50.8	-	FZFL01	576	-	-	9/6/17	9/23/17	Contig	Ausgem	SAMEA104140449	GCA_900195675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/675/GCA_900195675.1_F1_4D	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0361	39.6	-	FEDJ01	38	2233	1990	2/9/16	3/13/17	Scaffold	SC	SAMEA2238631	GCA_900017905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/905/GCA_900017905.1_11861_1_69	-	2842STDY5644003
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70146	52.1	-	CJAG01	59	4843	4505	3/21/15	2/27/17	Scaffold	SC	SAMEA2157567	GCA_001138905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/138/905/GCA_001138905.1_10492_1_56	-	MDUST274
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78858	32.7	-	FGQE01	65	2889	2741	2/10/16	3/5/17	Contig	SC	SAMEA1469603	GCA_900022625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/625/GCA_900022625.1_7480_7_7	-	st1123
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78613	32.7	-	FGRB01	56	2896	2731	2/10/16	3/6/17	Contig	SC	SAMEA1464244	GCA_900022635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/635/GCA_900022635.1_7521_5_60	-	st1386
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93359	51.8	-	CJVS01	60	5141	4754	3/21/15	2/27/17	Scaffold	SC	SAMEA2058429	GCA_001139705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/705/GCA_001139705.1_9870_8_64	-	BC2011-1305
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99108	39.8	-	FEFJ01	44	2183	1938	2/9/16	3/6/17	Scaffold	SC	SAMEA2238726	GCA_900017915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/915/GCA_900017915.1_11861_2_66	-	2842STDY5644099
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.89977	50.5	-	FZFP01	294	-	-	9/6/17	9/23/17	Contig	Ausgem	SAMEA104140485	GCA_900195695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/695/GCA_900195695.1_F1_405C	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.38536	50.3	-	FZFG01	334	-	-	9/7/17	9/23/17	Contig	Ausgem	SAMEA104140476	GCA_900195705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/705/GCA_900195705.1_F1_402A	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15522	39.5	-	FCPP01	39	2391	2138	2/6/16	3/13/17	Scaffold	SC	SAMEA2238728	GCA_900017925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/925/GCA_900017925.1_11861_2_68	-	2842STDY5644101
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73602	52	-	CJCD01	57	4891	4542	3/21/15	2/27/17	Scaffold	SC	SAMEA2147906	GCA_001139745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/745/GCA_001139745.1_10493_1_53	-	MDUST279
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78674	32.7	-	FGRN01	17	2930	2779	2/10/16	3/6/17	Contig	SC	SAMEA1464324	GCA_900022645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/645/GCA_900022645.1_7748_6_20	-	st1509
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.93865	32.7	-	FGSG01	59	3097	2899	2/10/16	3/5/17	Contig	SC	SAMEA1464429	GCA_900022655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/655/GCA_900022655.1_7521_6_82	-	st1709
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7019	52.1	-	CJES01	64	4855	4488	3/21/15	2/27/17	Scaffold	SC	SAMEA2151357	GCA_001140305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/305/GCA_001140305.1_10541_2_54	-	MDUST349
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.29175	39.5	-	FFQS01	376	2510	2156	2/9/16	3/13/17	Scaffold	SC	SAMEA2203767	GCA_900017955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/955/GCA_900017955.1_11657_8_6	-	2245STDY5608906
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.64856	50.5	-	FZFO01	580	-	-	9/6/17	9/23/17	Contig	Ausgem	SAMEA104140471	GCA_900195715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/715/GCA_900195715.1_F1_368E	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.36237	50.4	-	FZEZ01	258	-	-	9/7/17	9/23/17	Contig	Ausgem	SAMEA104140461	GCA_900195725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/725/GCA_900195725.1_F1_25C	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09686	39.6	-	FDRS01	29	2303	2058	2/9/16	3/13/17	Scaffold	SC	SAMEA2239125	GCA_900018375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/375/GCA_900018375.1_11860_7_86	-	2842STDY5644506
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.78028	52.1	-	CJIA01	74	4977	4608	3/21/15	2/27/17	Scaffold	SC	SAMEA2151806	GCA_001140345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/345/GCA_001140345.1_10562_2_71	-	MDUST381
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.93883	32.7	-	FGSJ01	50	3097	2910	2/10/16	3/5/17	Contig	SC	SAMEA1464511	GCA_900022665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/665/GCA_900022665.1_7521_6_88	-	st1728
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84525	32.7	-	FGTA01	50	2958	2808	2/10/16	3/5/17	Contig	SC	SAMEA1317368	GCA_900022675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/675/GCA_900022675.1_7469_7_18	-	st1816
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74669	52.1	-	CJEH01	62	4906	4536	3/21/15	2/27/17	Scaffold	SC	SAMEA2157394	GCA_001140485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/485/GCA_001140485.1_10541_2_44	-	MDUST327
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.16098	39.5	-	FDRX01	36	2362	2121	2/9/16	3/13/17	Scaffold	SC	SAMEA2239161	GCA_900018385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/385/GCA_900018385.1_11860_8_27	-	2842STDY5644543
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.81021	50.1	-	FZFX01	781	-	-	9/6/17	9/23/17	Contig	Ausgem	SAMEA104140484	GCA_900195735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/735/GCA_900195735.1_F1_404D	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.70489	50.1	-	FZGW01	342	-	-	9/7/17	9/23/17	Contig	Ausgem	SAMEA104140456	GCA_900195765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/765/GCA_900195765.1_F1_8E	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.17233	39.6	-	FDSQ01	64	2447	2179	2/9/16	3/13/17	Scaffold	SC	SAMEA2239191	GCA_900018395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/395/GCA_900018395.1_11860_8_59	-	2842STDY5644573
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73491	52	-	CJXN01	45	4897	4546	3/21/15	2/27/17	Scaffold	SC	SAMEA2059357	GCA_001140605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/605/GCA_001140605.1_9953_5_37	-	A360
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82241	32.8	-	FFPH01	57	2933	2778	2/9/16	3/6/17	Contig	SC	SAMEA1464635	GCA_900024965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/965/GCA_900024965.1_7564_8_75	-	st3179
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80007	32.7	-	FFXM01	51	2892	2752	2/10/16	3/5/17	Contig	SC	SAMEA1464547	GCA_900024995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/995/GCA_900024995.1_7554_6_62	-	st263
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71903	52	-	CIXM01	55	4885	4499	3/21/15	2/27/17	Scaffold	SC	SAMEA2072812	GCA_001140985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/985/GCA_001140985.1_10349_1_51	-	ERL09892
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04867	39.6	-	FDUA01	29	2227	1992	2/9/16	3/13/17	Scaffold	SC	SAMEA2239239	GCA_900018405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/405/GCA_900018405.1_11861_5_12	-	2842STDY5644622
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.71805	50.8	-	FZHN01	118	-	-	9/6/17	9/23/17	Contig	Ausgem	SAMEA104140506	GCA_900195945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/945/GCA_900195945.1_F2_24	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.96761	50.7	-	FZHF01	444	-	-	9/6/17	9/23/17	Contig	Ausgem	SAMEA104140508	GCA_900195975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/975/GCA_900195975.1_F2_27	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98112	39.8	-	FDUJ01	19	2191	1966	2/9/16	3/13/17	Scaffold	SC	SAMEA2239257	GCA_900018415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/415/GCA_900018415.1_11861_5_30	-	2842STDY5644640
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73344	52	-	CJCL01	58	4904	4548	3/21/15	2/27/17	Scaffold	SC	SAMEA2148499	GCA_001141045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/045/GCA_001141045.1_10493_1_71	-	MDUST330
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86966	32.7	-	FGAL01	66	2993	2840	2/10/16	3/5/17	Contig	SC	SAMEA1317440	GCA_900025015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/015/GCA_900025015.1_7414_8_29	-	st571
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81389	32.7	-	FGBJ01	42	2928	2791	2/10/16	3/5/17	Contig	SC	SAMEA1464629	GCA_900025025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/025/GCA_900025025.1_7712_8_15	-	st676
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71505	52.1	-	CJBS01	56	4890	4526	3/21/15	2/27/17	Scaffold	SC	SAMEA2152750	GCA_001141085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/085/GCA_001141085.1_10493_1_34	-	MDUST202
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00085	39.7	-	FDVU01	32	2168	1966	2/9/16	3/6/17	Scaffold	SC	SAMEA2238292	GCA_900018425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/425/GCA_900018425.1_11860_4_17	-	2842STDY5643661
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.32327	50.3	-	FZHJ01	459	-	-	9/7/17	9/23/17	Contig	Ausgem	SAMEA104140455	GCA_900196025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/025/GCA_900196025.1_F1_7F	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.83775	50.6	-	FZHP01	92	-	-	9/6/17	9/23/17	Contig	Ausgem	SAMEA104140523	GCA_900196075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/075/GCA_900196075.1_F2_43	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06002	39.5	-	FDVY01	36	2275	2032	2/9/16	3/13/17	Scaffold	SC	SAMEA2238297	GCA_900018435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/435/GCA_900018435.1_11860_4_22	-	2842STDY5643666
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82819	52	-	CIWK01	41	5017	4650	3/21/15	2/27/17	Scaffold	SC	SAMEA2072803	GCA_001141105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/105/GCA_001141105.1_10349_1_24	-	ERL063423
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77565	32.7	-	FFOO01	79	2841	2691	2/9/16	3/6/17	Contig	SC	SAMEA1317340	GCA_900031645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/645/GCA_900031645.1_7469_7_29	-	st1846
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87667	32.7	-	FFOM01	77	3005	2854	2/9/16	3/5/17	Contig	SC	SAMEA1317314	GCA_900031655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/655/GCA_900031655.1_7469_7_37	-	st1906
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81655	51.9	-	CJJH01	46	5008	4641	3/21/15	2/27/17	Scaffold	SC	SAMEA1929435	GCA_001141125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/125/GCA_001141125.1_10592_2_4	-	1093
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10131	39.6	-	FDWA01	54	2294	2052	2/9/16	3/13/17	Scaffold	SC	SAMEA2238301	GCA_900018445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/445/GCA_900018445.1_11860_4_26	-	2842STDY5643670
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.77872	50.8	-	FZIH01	74	-	-	9/6/17	9/23/17	Contig	Ausgem	SAMEA104140535	GCA_900196225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/225/GCA_900196225.1_F2_55	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.00403	50.7	-	FZJJ01	505	-	-	9/6/17	9/6/17	Contig	Ausgem	SAMEA104140552	GCA_900196375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/375/GCA_900196375.1_F2_73	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04693	39.7	-	FDWE01	29	2253	2007	2/9/16	3/15/17	Scaffold	SC	SAMEA2238310	GCA_900018455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/455/GCA_900018455.1_11860_4_36	-	2842STDY5643679
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72082	52	-	CJDK01	67	4868	4514	3/21/15	2/27/17	Scaffold	SC	SAMEA2154469	GCA_001141205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/205/GCA_001141205.1_10541_2_14	-	MDUST208
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86681	32.7	-	FFOR01	48	3007	2821	2/9/16	3/5/17	Contig	SC	SAMEA1317564	GCA_900031665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/665/GCA_900031665.1_7469_7_87	-	st2149
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8064	32.7	-	FFOS01	45	2906	2739	2/9/16	3/5/17	Contig	SC	SAMEA1469704	GCA_900031675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/675/GCA_900031675.1_7480_8_10	-	st2201
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71951	52	-	CIYO01	44	4875	4511	3/21/15	2/27/17	Scaffold	SC	SAMEA2161319	GCA_001141225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/225/GCA_001141225.1_10425_1_6	-	np80
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06787	39.6	-	FDZA01	42	2292	2035	2/9/16	3/13/17	Scaffold	SC	SAMEA2238433	GCA_900018465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/465/GCA_900018465.1_11860_5_64	-	2842STDY5643803
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.34539	50.2	-	FZJE01	145	-	-	9/6/17	9/23/17	Contig	Ausgem	SAMEA104140573	GCA_900196475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/475/GCA_900196475.1_ETECM_10	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.8679	50.7	-	FZJP01	169	-	-	9/7/17	9/23/17	Contig	Ausgem	SAMEA104140576	GCA_900196565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/565/GCA_900196565.1_F2_14	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15153	39.6	-	FEAB01	38	2377	2135	2/9/16	3/13/17	Scaffold	SC	SAMEA2238483	GCA_900018475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/475/GCA_900018475.1_11860_6_16	-	2842STDY5643854
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72137	52	-	CJIB01	51	4881	4528	3/21/15	2/27/17	Scaffold	SC	SAMEA2148584	GCA_001141445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/445/GCA_001141445.1_10562_2_73	-	MDUST390
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.80127	32.7	-	FFPX01	26	2891	2744	2/9/16	3/6/17	Contig	SC	SAMEA1464537	GCA_900033745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/745/GCA_900033745.1_8728_5_36	-	st2593
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8777	32.7	-	FFQB01	33	3002	2818	2/9/16	3/5/17	Contig	SC	SAMEA1568637	GCA_900033755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/755/GCA_900033755.1_8490_3_1	-	st830
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74739	52.1	-	CJTB01	45	4914	4541	3/21/15	2/27/17	Scaffold	SC	SAMEA1903871	GCA_001141825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/825/GCA_001141825.1_9475_6_45	-	1021624
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0706	39.7	-	FEAD01	32	2318	2064	2/9/16	3/13/17	Scaffold	SC	SAMEA2238488	GCA_900018485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/485/GCA_900018485.1_11860_6_21	-	2842STDY5643859
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.86497	50.7	-	FZJF01	177	-	-	9/7/17	9/23/17	Contig	Ausgem	SAMEA104140575	GCA_900196575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/575/GCA_900196575.1_F2_12	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.93988	50.8	-	FZJG01	179	-	-	9/6/17	9/6/17	Contig	Ausgem	SAMEA104140574	GCA_900196585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/585/GCA_900196585.1_F2_11	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13343	39.6	-	FEDB01	45	2383	2117	2/9/16	3/13/17	Scaffold	SC	SAMEA2238615	GCA_900018495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/495/GCA_900018495.1_11861_1_53	-	2842STDY5643987
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72833	52.1	-	CIZL01	44	4914	4551	3/21/15	2/27/17	Scaffold	SC	SAMEA2163024	GCA_001141905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/905/GCA_001141905.1_10492_1_3	-	MDUST120
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.90901	32.7	-	FFQG01	42	3070	2876	2/9/16	3/5/17	Contig	SC	SAMEA1568615	GCA_900033765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/765/GCA_900033765.1_8490_3_6	-	st847
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79189	32.7	-	FFQH01	27	2881	2737	2/9/16	3/5/17	Contig	SC	SAMEA1568614	GCA_900033775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/775/GCA_900033775.1_8490_3_7	-	st848
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.75403	52	-	CIXC01	58	4926	4564	3/21/15	2/27/17	Scaffold	SC	SAMEA2072650	GCA_001141945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/945/GCA_001141945.1_10349_1_43	-	ERL091092
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06047	39.5	-	FEEE01	24	2273	2040	2/9/16	3/5/17	Scaffold	SC	SAMEA2238673	GCA_900018505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/505/GCA_900018505.1_11861_2_12	-	2842STDY5644046
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.69196	50.8	-	FZJS01	38	-	-	9/6/17	9/23/17	Contig	Ausgem	SAMEA104140569	GCA_900196595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/595/GCA_900196595.1_F2_92	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.25149	50.5	-	FZJQ01	200	-	-	9/7/17	9/23/17	Contig	Ausgem	SAMEA104140580	GCA_900196615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/615/GCA_900196615.1_F2_90	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05025	39.6	-	FEFS01	31	2218	2006	2/9/16	3/5/17	Scaffold	SC	SAMEA2238755	GCA_900018515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/515/GCA_900018515.1_12273_1_90	-	2842STDY5644129
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7312	52	-	CJHD01	58	4911	4540	3/21/15	2/27/17	Scaffold	SC	SAMEA1970910	GCA_001142085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/085/GCA_001142085.1_10562_2_45	-	MDUST302
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83517	32.7	-	FFOZ01	41	2947	2781	2/9/16	3/5/17	Contig	SC	SAMEA1464513	GCA_900035585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/585/GCA_900035585.1_7748_6_54	-	st2672
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8104	32.7	-	FFPC01	49	2919	2741	2/9/16	3/5/17	Contig	SC	SAMEA1464580	GCA_900035595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/595/GCA_900035595.1_7748_6_80	-	st2803
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.97223	51.7	-	CJIX01	53	5182	4802	3/21/15	2/27/17	Scaffold	SC	SAMEA1929444	GCA_001142285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/285/GCA_001142285.1_10592_2_23	-	3283
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11347	39.6	-	FCRE01	51	2314	2077	2/6/16	3/13/17	Scaffold	SC	SAMEA2239001	GCA_900018525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/525/GCA_900018525.1_11861_4_55	-	2842STDY5644377
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.07273	50.5	-	FZJR01	250	-	-	9/6/17	9/6/17	Contig	Ausgem	SAMEA104140578	GCA_900196625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/625/GCA_900196625.1_F2_59	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.86929	50.7	-	FZJY01	180	-	-	9/7/17	9/23/17	Contig	Ausgem	SAMEA104140577	GCA_900196635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/635/GCA_900196635.1_F2_15	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01499	39.8	-	FCRB01	21	2251	2004	2/6/16	3/13/17	Scaffold	SC	SAMEA2383266	GCA_900018535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/535/GCA_900018535.1_12754_4_56	-	2842STDY5753813
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74586	52.1	-	CJID01	62	4909	4546	3/21/15	2/27/17	Scaffold	SC	SAMEA2155842	GCA_001142345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/345/GCA_001142345.1_10562_2_75	-	MDUST394
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80152	32.7	-	FFVB01	49	2894	2748	2/10/16	3/5/17	Contig	SC	SAMEA1317444	GCA_900035645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/645/GCA_900035645.1_7414_7_32	-	st78
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83163	32.7	-	FFVN01	54	2955	2780	2/10/16	3/5/17	Contig	SC	SAMEA1317399	GCA_900035655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/655/GCA_900035655.1_7414_7_12	-	st39
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73277	52	-	CJXI01	54	4881	4526	3/21/15	2/27/17	Scaffold	SC	SAMEA2056353	GCA_001142525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/525/GCA_001142525.1_9953_5_3	-	A268
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04174	39.6	-	FCRQ01	24	2247	2016	2/6/16	3/13/17	Scaffold	SC	SAMEA2239063	GCA_900018545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/545/GCA_900018545.1_11860_7_22	-	2842STDY5644443
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.88192	50.5	-	FZJZ01	156	-	-	9/7/17	9/23/17	Contig	Ausgem	SAMEA104140579	GCA_900196655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/655/GCA_900196655.1_F2_89	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.76792	50.7	-	FZKC01	98	-	-	9/6/17	9/23/17	Contig	Ausgem	SAMEA104140582	GCA_900196665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/665/GCA_900196665.1_F2_95	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0586	39.5	-	FEKN01	34	2279	2043	2/9/16	3/13/17	Scaffold	SC	SAMEA2383173	GCA_900018555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/555/GCA_900018555.1_12754_3_58	-	2842STDY5753719
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72232	52	-	CJAU01	54	4886	4526	3/21/15	2/27/17	Scaffold	SC	SAMEA2155233	GCA_001142565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/565/GCA_001142565.1_10492_1_72	-	MDUST385
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80021	32.7	-	FFWF01	50	2889	2741	2/10/16	3/5/17	Contig	SC	SAMEA1317538	GCA_900035665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/665/GCA_900035665.1_7414_7_27	-	st70
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79755	32.7	-	FFWA01	52	2893	2748	2/10/16	3/5/17	Contig	SC	SAMEA1317498	GCA_900035675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/675/GCA_900035675.1_7414_7_20	-	st57
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82972	52	-	CIZB01	53	5039	4630	3/21/15	2/27/17	Scaffold	SC	SAMEA2147412	GCA_001142625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/625/GCA_001142625.1_10492_1_12	-	MDUST145
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08696	39.6	-	FELY01	36	2269	2049	2/9/16	3/13/17	Scaffold	SC	SAMEA2383210	GCA_900018565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/565/GCA_900018565.1_12754_3_95	-	2842STDY5753756
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.54119	50.5	-	FZJW01	529	-	-	9/7/17	9/23/17	Contig	Ausgem	SAMEA104140572	GCA_900196685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/685/GCA_900196685.1_ETEC_286_3	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.90002	50.7	-	FZKB01	163	-	-	9/7/17	9/23/17	Contig	Ausgem	SAMEA104140581	GCA_900196695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/695/GCA_900196695.1_F2_93	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08317	39.6	-	FEOK01	32	2300	2064	2/9/16	3/5/17	Scaffold	SC	SAMEA2674618	GCA_900018575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/575/GCA_900018575.1_14355_8_91	-	2842STDY5881878
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70861	52.1	-	CJGP01	54	4872	4519	3/21/15	2/27/17	Scaffold	SC	SAMEA2152212	GCA_001142665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/665/GCA_001142665.1_10562_2_23	-	MDUST218
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83901	32.7	-	FFVW01	62	2941	2790	2/10/16	3/5/17	Contig	SC	SAMEA1317388	GCA_900035685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/685/GCA_900035685.1_7414_7_11	-	st38
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83612	32.7	-	FFWR01	74	2935	2780	2/10/16	3/5/17	Contig	SC	SAMEA1464223	GCA_900035695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/695/GCA_900035695.1_7554_6_35	-	st189
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73771	52.1	-	CJFN01	60	4905	4533	3/21/15	2/27/17	Scaffold	SC	SAMEA2151974	GCA_001142785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/785/GCA_001142785.1_10561_2_37	-	np16
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99402	39.7	-	FEOW01	25	2199	1951	2/9/16	3/13/17	Scaffold	SC	SAMEA2674664	GCA_900018585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/585/GCA_900018585.1_14412_3_42	-	2842STDY5881925
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.24994	50.5	-	FZKE01	194	-	-	9/6/17	9/23/17	Contig	Ausgem	SAMEA104140584	GCA_900196705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/705/GCA_900196705.1_F2_98	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.94048	50.4	-	FZKD01	92	-	-	9/7/17	9/23/17	Contig	Ausgem	SAMEA104140585	GCA_900196715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/715/GCA_900196715.1_F2_99	-	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.05052	39.8	-	FFRI01	37	2256	2024	2/9/16	6/9/17	Scaffold	SC	SAMEA2203787	GCA_900018675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/675/GCA_900018675.1_11511_8_9	-	2245STDY5608926
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71926	52	-	CJDA01	42	4893	4519	3/21/15	2/27/17	Scaffold	SC	SAMEA2159440	GCA_001142805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/805/GCA_001142805.1_10493_1_9	-	MDUST128
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81837	32.7	-	FFWV01	69	2923	2768	2/10/16	3/5/17	Contig	SC	SAMEA1464698	GCA_900035715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/715/GCA_900035715.1_7554_6_40	-	st207
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.81841	32.7	-	FFWY01	33	2938	2760	2/10/16	3/5/17	Contig	SC	SAMEA1464484	GCA_900035725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/725/GCA_900035725.1_8728_5_20	-	st217
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.76991	52.1	-	CJZB01	45	4943	4586	3/21/15	2/27/17	Scaffold	SC	SAMEA2056539	GCA_001142965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/142/965/GCA_001142965.1_9953_5_87	-	LNT659
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99238	39.8	-	FDRF01	44	2192	1928	2/9/16	3/15/17	Scaffold	SC	SAMEA2239108	GCA_900018795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/795/GCA_900018795.1_11860_7_69	-	2842STDY5644489
Escherichia coli W	566546	PRJNA42709	42709	Proteobacteria	Gammaproteobacteria	4.94108	50.8	-	AEDF01	88	5165	4897	9/13/10	5/18/17	Scaffold	US DOE Joint Genome Institute (JGI-PGF)	SAMN00017225	GCA_000147755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/755/GCA_000147755.2_ASM14775v1	-	W
Escherichia coli O104:H4 str. 01-09591	1042803	PRJNA67931	67931	Proteobacteria	Gammaproteobacteria	5.49159	50.6	-	AFPS01	287	5913	5074	7/20/11	8/8/17	Scaffold	Life Technologies	SAMN02470246	GCA_000221065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/065/GCA_000221065.2_Ecoli.O104_H4.01-09591_1.0	21799941	01-09591
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01219	39.7	-	FDRA01	22	2244	2008	2/9/16	3/13/17	Scaffold	SC	SAMEA2239109	GCA_900018805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/805/GCA_900018805.1_11860_7_70	-	2842STDY5644490
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70947	52.1	-	CJDN01	55	4869	4511	3/21/15	2/27/17	Scaffold	SC	SAMEA2145678	GCA_001143025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/025/GCA_001143025.1_10541_2_17	-	MDUST212
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.96701	32.6	-	FFXU01	65	3119	2932	2/10/16	3/5/17	Contig	SC	SAMEA1464413	GCA_900035735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/735/GCA_900035735.1_7554_6_80	-	st309
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.96694	32.6	-	FFXX01	66	3122	2931	2/10/16	3/5/17	Contig	SC	SAMEA1464316	GCA_900035745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/745/GCA_900035745.1_7554_6_78	-	st306
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72498	52	-	CJCU01	61	4880	4515	3/21/15	2/27/17	Scaffold	SC	SAMEA2163461	GCA_001143045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/045/GCA_001143045.1_10493_1_79	-	MDUST368
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07444	39.5	-	FDRV01	42	2267	2029	2/9/16	3/13/17	Scaffold	SC	SAMEA2239112	GCA_900018815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/815/GCA_900018815.1_11860_7_73	-	2842STDY5644493
Escherichia coli ECA-0157	758829	PRJNA48061	48061	Proteobacteria	Gammaproteobacteria	4.65414	50.7	-	AHHK01	1173	5159	4271	11/21/13	8/8/17	Scaffold	Cornell University	SAMN02429087	GCA_000498175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/175/GCA_000498175.1_ASM49817v1	25807497	ECA-0157
Escherichia coli ECA-727	758830	PRJNA48063	48063	Proteobacteria	Gammaproteobacteria	4.85986	50.7	-	AHHL01	539	5200	4484	11/21/13	8/8/17	Scaffold	Cornell University	SAMN02429088	GCA_000498195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/498/195/GCA_000498195.1_ASM49819v1	25807497	ECA-727
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07611	39.6	-	FDSU01	29	2303	2050	2/9/16	3/8/17	Scaffold	SC	SAMEA2239196	GCA_900018825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/825/GCA_900018825.1_11860_8_64	-	2842STDY5644578
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69766	52.1	-	CJCC01	56	4872	4507	3/21/15	2/27/17	Scaffold	SC	SAMEA2154531	GCA_001143405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/405/GCA_001143405.1_10493_1_48	-	MDUST250
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.74423	32.7	-	FFYM01	57	2805	2662	2/10/16	3/6/17	Contig	SC	SAMEA1317441	GCA_900035755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/755/GCA_900035755.1_7414_7_52	-	st364
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80367	32.7	-	FFYR01	47	2897	2751	2/10/16	3/5/17	Contig	SC	SAMEA1317525	GCA_900035765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/765/GCA_900035765.1_7414_7_60	-	st402
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81073	52	-	CJGS01	79	5025	4660	3/21/15	2/27/17	Scaffold	SC	SAMEA2146502	GCA_001143625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/625/GCA_001143625.1_10562_2_25	-	MDUST227
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0017	39.7	-	FDTE01	41	2208	2000	2/9/16	3/13/17	Scaffold	SC	SAMEA2239213	GCA_900018835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/835/GCA_900018835.1_11860_8_81	-	2842STDY5644595
Escherichia coli O6:H16:CFA/II str. B2C	1370107	PRJNA213351	213351	Proteobacteria	Gammaproteobacteria	5.01813	50.5	-	AUZS01	313	5290	4859	1/8/14	2/23/17	Scaffold	Griffith University	SAMN02264027	GCA_000517245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/517/245/GCA_000517245.1_ETEC_B2C	24723709	B2C
Escherichia coli O111:NM str. 2011C-3170	1446528	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.22011	50.3	-	JHMA01	195	5647	5175	4/7/14	2/25/17	Scaffold	CDC	SAMN02353017	GCA_000614035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/035/GCA_000614035.2_Ec2011C-3170	25103754	2011C-3170
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05929	39.6	-	FDTG01	30	2274	2042	2/9/16	3/12/17	Scaffold	SC	SAMEA2239215	GCA_900018845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/845/GCA_900018845.1_11860_8_83	-	2842STDY5644597
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70137	52.1	-	CJUD01	46	4867	4512	3/21/15	2/27/17	Scaffold	SC	SAMEA1903917	GCA_001143985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/143/985/GCA_001143985.1_9475_6_90	-	D28995
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82848	32.7	-	FFYU01	60	2927	2776	2/10/16	3/5/17	Contig	SC	SAMEA1317491	GCA_900035775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/775/GCA_900035775.1_7414_7_64	-	st410
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78877	32.7	-	FFYY01	58	2868	2718	2/10/16	3/5/17	Contig	SC	SAMEA1317450	GCA_900035785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/785/GCA_900035785.1_7414_7_66	-	st413
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74885	52.1	-	CJTQ01	46	4924	4555	3/21/15	2/27/17	Scaffold	SC	SAMEA1903893	GCA_001144045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/045/GCA_001144045.1_9475_6_67	-	1019806
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06067	39.6	-	FDUM01	39	2228	2000	2/9/16	3/6/17	Scaffold	SC	SAMEA2239262	GCA_900018855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/855/GCA_900018855.1_11861_5_36	-	2842STDY5644645
Escherichia coli O157:H7 str. 2011EL-2288	1446647	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.32767	50.2	-	JHKE01	193	5737	5283	4/7/14	2/25/17	Scaffold	CDC	SAMN02353061	GCA_000614085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/085/GCA_000614085.2_Ec2011EL-2288	25103754	2011EL-2288
Escherichia coli O121:H19 str. 2011C-3108	1446570	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.14292	50.4	-	JHMB01	198	5465	5024	4/7/14	2/25/17	Scaffold	CDC	SAMN02353016	GCA_000614215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/215/GCA_000614215.2_Ec2011C-3108	25103754	2011C-3108
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11045	39.7	-	FDUI01	37	2344	2097	2/9/16	3/13/17	Scaffold	SC	SAMEA2239255	GCA_900018865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/865/GCA_900018865.1_11861_5_28	-	2842STDY5644638
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71801	52.1	-	CJLD01	43	4882	4520	3/21/15	2/27/17	Scaffold	SC	SAMEA1930178	GCA_001144245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/245/GCA_001144245.1_10593_2_6	-	E00-3370
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82738	32.7	-	FFYW01	71	2927	2766	2/10/16	3/5/17	Contig	SC	SAMEA1317428	GCA_900035795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/795/GCA_900035795.1_7414_7_67	-	st418
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80205	32.7	-	FFYV01	52	2895	2748	2/10/16	3/5/17	Contig	SC	SAMEA1317415	GCA_900035805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/805/GCA_900035805.1_7414_7_69	-	st423
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74199	52.1	-	CJMU01	48	4909	4549	3/21/15	2/27/17	Scaffold	SC	SAMEA2148900	GCA_001144345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/345/GCA_001144345.1_10607_2_37	-	1036143
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15059	39.6	-	FDVN01	44	2365	2122	2/9/16	3/13/17	Scaffold	SC	SAMEA2238283	GCA_900018875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/875/GCA_900018875.1_11860_4_7	-	2842STDY5643652
Escherichia coli O157:H7 str. 2011EL-2286	1446645	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.29416	50.2	-	JHKG01	194	5701	5251	4/7/14	2/25/17	Scaffold	CDC	SAMN02353059	GCA_000614305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/305/GCA_000614305.2_Ec2011EL-2286	25103754	2011EL-2286
Escherichia coli O157:H7 str. 2011EL-2312	1446650	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.34494	50.2	-	JHKB01	216	5746	5279	4/7/14	2/25/17	Scaffold	CDC	SAMN02353064	GCA_000614345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/345/GCA_000614345.2_Ec2011EL-2312	25103754	2011EL-2312
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02174	39.7	-	FDWT01	46	2228	1965	2/9/16	3/13/17	Scaffold	SC	SAMEA2238340	GCA_900018885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/885/GCA_900018885.1_11860_4_67	-	2842STDY5643709
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7542	52	-	CJHB01	51	4931	4560	3/21/15	2/27/17	Scaffold	SC	SAMEA2149790	GCA_001144465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/465/GCA_001144465.1_10562_2_32	-	MDUST247
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79673	32.7	-	FFYZ01	55	2893	2743	2/10/16	3/5/17	Contig	SC	SAMEA1317484	GCA_900035815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/815/GCA_900035815.1_7414_7_71	-	st426
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78319	32.7	-	FFZH01	51	2863	2724	2/10/16	3/5/17	Contig	SC	SAMEA1317451	GCA_900035825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/825/GCA_900035825.1_7414_7_84	-	st469
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74831	52.1	-	CJTU01	45	4913	4548	3/21/15	2/27/17	Scaffold	SC	SAMEA1903892	GCA_001144645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/645/GCA_001144645.1_9475_6_66	-	1020059
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0426	39.8	-	FDYC01	43	2286	2053	2/9/16	3/5/17	Scaffold	SC	SAMEA2238396	GCA_900018895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/895/GCA_900018895.1_11860_5_27	-	2842STDY5643766
Escherichia coli O157:H7 str. 2011EL-2287	1446646	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.42215	50.1	-	JHKF01	182	5878	5421	4/7/14	2/25/17	Scaffold	CDC	SAMN02353060	GCA_000614405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/405/GCA_000614405.2_Ec2011EL-2287	25103754	2011EL-2287
Escherichia coli O6:H16 str. 99-3165	1446747	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	4.74786	50.6	-	JHJW01	204	5018	4603	4/7/14	2/25/17	Scaffold	CDC	SAMN02353069	GCA_000614435.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/435/GCA_000614435.2_Ec99-3165	25103754	99-3165
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11683	39.6	-	FDYJ01	68	2345	2080	2/9/16	3/13/17	Scaffold	SC	SAMEA2238409	GCA_900018905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/905/GCA_900018905.1_11860_5_39	-	2842STDY5643779
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73554	52	-	CJDW01	61	4888	4537	3/21/15	2/27/17	Scaffold	SC	SAMEA2158491	GCA_001144665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/665/GCA_001144665.1_10541_2_22	-	MDUST277
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86767	32.7	-	FFZU01	50	3004	2823	2/10/16	3/5/17	Contig	SC	SAMEA1464392	GCA_900035835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/835/GCA_900035835.1_7564_8_3	-	st523
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85407	32.7	-	FGAK01	65	2984	2803	2/10/16	3/5/17	Contig	SC	SAMEA1317477	GCA_900035845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/845/GCA_900035845.1_7414_8_28	-	st569
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.77954	52.1	-	CJEJ01	49	4965	4605	3/21/15	2/27/17	Scaffold	SC	SAMEA2153087	GCA_001145105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/105/GCA_001145105.1_10541_2_4	-	MDUST138
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01559	39.8	-	FEBD01	22	2257	2014	2/9/16	3/13/17	Scaffold	SC	SAMEA2238531	GCA_900018915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/915/GCA_900018915.1_11860_6_65	-	2842STDY5643902
Escherichia coli O86:H34 str. 99-3124	1446762	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	4.89085	50.5	-	JHJX01	181	5175	4767	4/7/14	2/25/17	Scaffold	CDC	SAMN02353068	GCA_000614465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/465/GCA_000614465.2_Ec99-3124	25103754	99-3124
Escherichia coli O153:H2 str. 2010C-5034	1446603	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.24959	50.6	-	JHMH01	250	5690	5250	4/7/14	2/25/17	Scaffold	CDC	SAMN02353010	GCA_000614565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/565/GCA_000614565.2_Ec2010C-5034	25103754	2010C-5034
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0435	39.6	-	FEBM01	47	2258	1993	2/9/16	3/13/17	Scaffold	SC	SAMEA2238548	GCA_900018925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/925/GCA_900018925.1_11860_6_82	-	2842STDY5643919
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71894	52	-	CEYF01	55	4879	4522	3/13/15	2/27/17	Scaffold	SC	SAMEA2142960	GCA_001145205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/205/GCA_001145205.1_10493_1_59	-	MDUST289
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83747	32.7	-	FGAU01	67	2947	2792	2/10/16	3/5/17	Contig	SC	SAMEA1317505	GCA_900035855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/855/GCA_900035855.1_7414_8_44	-	st624
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.80575	32.7	-	FGAW01	26	2900	2753	2/10/16	3/5/17	Contig	SC	SAMEA1317410	GCA_900035865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/865/GCA_900035865.1_8728_5_22	-	st626
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71995	52	-	CJFF01	54	4878	4518	3/21/15	2/27/17	Scaffold	SC	SAMEA2147910	GCA_001145385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/385/GCA_001145385.1_10561_2_23	-	H12ESR01946-001A
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08731	39.5	-	FEBP01	65	2319	2027	2/9/16	3/15/17	Scaffold	SC	SAMEA2238551	GCA_900018935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/935/GCA_900018935.1_11860_6_85	-	2842STDY5643922
Escherichia coli O121:H19 str. 2010EL1058	1446568	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.13574	50.4	-	JHMG01	199	5446	5020	4/7/14	2/23/17	Scaffold	CDC	SAMN02353011	GCA_000614595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/595/GCA_000614595.1_Ec2010EL1058	25103754	2010EL1058
Escherichia coli O157:H7 str. 2011EL-2113	1446643	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.31402	50.3	-	JHKI01	193	5695	5248	4/7/14	2/25/17	Scaffold	CDC	SAMN02353057	GCA_000614645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/645/GCA_000614645.2_Ec2011EL-2113	25103754	2011EL-2113
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07491	39.7	-	FEBY01	42	2254	2002	2/9/16	3/13/17	Scaffold	SC	SAMEA2238563	GCA_900018945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/945/GCA_900018945.1_11861_1_1	-	2842STDY5643935
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7546	52	-	CIZK01	55	4937	4559	3/21/15	2/27/17	Scaffold	SC	SAMEA2157629	GCA_001145545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/545/GCA_001145545.1_10492_1_25	-	MDUST197
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85794	32.7	-	FGBD01	42	2998	2804	2/10/16	3/5/17	Contig	SC	SAMEA1464401	GCA_900035875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/875/GCA_900035875.1_7712_8_6	-	st653
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78721	32.7	-	FGBG01	43	2873	2728	2/10/16	3/5/17	Contig	SC	SAMEA1464287	GCA_900035885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/885/GCA_900035885.1_7712_8_11	-	st666
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.707	52	-	CEZO01	56	4864	4507	3/10/15	2/27/17	Scaffold	SC	SAMEA2142573	GCA_001145565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/565/GCA_001145565.1_10541_2_36	-	MDUST312
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10141	39.6	-	FCPJ01	38	2309	2049	2/6/16	3/13/17	Scaffold	SC	SAMEA2238737	GCA_900018955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/955/GCA_900018955.1_11861_2_76	-	2842STDY5644110
Escherichia coli O157:H7 str. 2011EL-2289	1446648	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.3476	50.2	-	JHKD01	229	5752	5298	4/7/14	2/25/17	Scaffold	CDC	SAMN02353062	GCA_000614685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/685/GCA_000614685.2_Ec2011EL-2289	25103754	2011EL-2289
Escherichia coli O121:H19 str. 2010C-4254	1446563	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.14166	50.4	-	JHFC01	198	5465	5027	4/7/14	2/25/17	Scaffold	CDC	SAMN02352986	GCA_000614725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/725/GCA_000614725.2_Ec2010C-4254	25103754	2010C-4254
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.03008	39.7	-	FCRY01	32	2221	1991	2/6/16	3/13/17	Scaffold	SC	SAMEA2239064	GCA_900018965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/965/GCA_900018965.1_11860_7_23	-	2842STDY5644444
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.722	52	-	CJDU01	52	4886	4514	3/21/15	2/27/17	Scaffold	SC	SAMEA1972237	GCA_001145945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/145/945/GCA_001145945.1_10541_2_21	-	MDUST225
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78757	32.7	-	FGBK01	40	2857	2705	2/10/16	3/5/17	Contig	SC	SAMEA1464518	GCA_900035895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/895/GCA_900035895.1_7712_8_20	-	st685
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81986	32.7	-	FGBP01	47	2913	2759	2/10/16	3/5/17	Contig	SC	SAMEA1464548	GCA_900035905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/905/GCA_900035905.1_7712_8_23	-	st688
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71751	52	-	CIWI01	42	4878	4526	3/21/15	2/27/17	Scaffold	SC	SAMEA2072499	GCA_001146025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/025/GCA_001146025.1_10349_1_19	-	ERL043008
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0617	39.6	-	FCRW01	21	2265	2042	2/6/16	3/5/17	Scaffold	SC	SAMEA2239055	GCA_900018975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/975/GCA_900018975.1_11860_7_14	-	2842STDY5644435
Escherichia coli O121:H19 str. 2009C-4659	1446556	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.13829	50.4	-	JHGN01	205	5457	5016	4/7/14	2/25/17	Scaffold	CDC	SAMN02352947	GCA_000614765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/765/GCA_000614765.2_Ec2009C-4659	25103754	2009C-4659
Escherichia coli O157:H7 str. F7350	1446656	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.3249	50.2	-	JHJN01	204	5685	5278	4/7/14	2/25/17	Scaffold	CDC	SAMN02353078	GCA_000614805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/805/GCA_000614805.2_EcF7350	25103754	F7350
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08257	39.6	-	FCQK01	45	2320	2051	2/6/16	3/13/17	Scaffold	SC	SAMEA2239029	GCA_900018985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/985/GCA_900018985.1_11861_4_83	-	2842STDY5644407
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73123	52.1	-	CJIP01	44	4909	4549	3/21/15	2/27/17	Scaffold	SC	SAMEA1929440	GCA_001146045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/045/GCA_001146045.1_10592_2_12	-	2439
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87349	32.6	-	FGBS01	33	3015	2888	2/10/16	3/5/17	Contig	SC	SAMEA1464426	GCA_900035915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/915/GCA_900035915.1_7712_8_29	-	st699
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79965	32.7	-	FGBT01	43	2897	2742	2/10/16	3/6/17	Contig	SC	SAMEA1464428	GCA_900035925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/925/GCA_900035925.1_7712_8_30	-	st701
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7386	52	-	CJAE01	57	4903	4554	3/21/15	2/27/17	Scaffold	SC	SAMEA2143771	GCA_001146125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/125/GCA_001146125.1_10492_1_57	-	MDUST295
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00036	39.6	-	FCRU01	22	2199	1974	2/6/16	3/13/17	Scaffold	SC	SAMEA2239014	GCA_900018995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/995/GCA_900018995.1_11861_4_68	-	2842STDY5644391
Escherichia coli O26:NM str. 2010C-4347	1446734	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.31189	50.4	-	JHFB01	279	5812	5296	4/7/14	2/25/17	Scaffold	CDC	SAMN02352987	GCA_000614845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/845/GCA_000614845.2_Ec2010C-4347	25103754	2010C-4347
Escherichia coli O157:H7 str. 2010C-4979C1	1446622	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.18666	50.2	-	JHMK01	182	5501	5057	4/7/14	2/25/17	Scaffold	CDC	SAMN02353007	GCA_000614885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/885/GCA_000614885.2_Ec2010C-4979C1	25103754	2010C-4979C1
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08877	39.6	-	FDSD01	29	2281	2057	2/9/16	3/13/17	Scaffold	SC	SAMEA2239118	GCA_900019425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/425/GCA_900019425.1_11860_7_79	-	2842STDY5644499
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74391	52.1	-	CIYV01	57	4910	4543	3/21/15	2/27/17	Scaffold	SC	SAMEA2162526	GCA_001146205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/205/GCA_001146205.1_10492_1_11	-	MDUST141
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85054	32.7	-	FGCC01	49	2946	2799	2/10/16	3/5/17	Contig	SC	SAMEA1464712	GCA_900035935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/935/GCA_900035935.1_7712_8_44	-	st755
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81935	32.7	-	FFOL01	55	2909	2760	2/9/16	3/5/17	Contig	SC	SAMEA1317382	GCA_900036395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/395/GCA_900036395.1_7469_7_12	-	st1797
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93349	51.8	-	CJUL01	69	5118	4738	3/21/15	2/27/17	Scaffold	SC	SAMEA2058231	GCA_001146305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/305/GCA_001146305.1_9870_8_16	-	2009-007146
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13027	39.6	-	FDSX01	47	2405	2132	2/9/16	3/13/17	Scaffold	SC	SAMEA2239203	GCA_900019435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/435/GCA_900019435.1_11860_8_71	-	2842STDY5644585
Escherichia coli O121:H19 str. 2009EL1412	1446559	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.13788	50.4	-	JHGG01	199	5466	5028	4/7/14	2/25/17	Scaffold	CDC	SAMN02352954	GCA_000614925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/925/GCA_000614925.2_Ec2009EL1412	25103754	2009EL1412
Escherichia coli O145:NM str. 2010C-3511	1446591	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.37032	50.5	-	JHFS01	221	5696	5205	4/7/14	2/25/17	Scaffold	CDC	SAMN02352969	GCA_000615225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/225/GCA_000615225.2_Ec2010C-3511	25103754	2010C-3511
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09867	39.7	-	FDUG01	55	2325	2075	2/9/16	3/6/17	Scaffold	SC	SAMEA2239251	GCA_900019445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/445/GCA_900019445.1_11861_5_24	-	2842STDY5644634
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7431	52	-	CJKT01	44	4926	4567	3/21/15	2/27/17	Scaffold	SC	SAMEA1930144	GCA_001146745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/745/GCA_001146745.1_10593_2_40	-	E97-9141
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81887	32.7	-	FFOP01	93	2941	2791	2/9/16	3/5/17	Contig	SC	SAMEA1317343	GCA_900036405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/405/GCA_900036405.1_7469_7_55	-	st1965
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79224	32.7	-	FFOT01	61	2886	2733	2/9/16	3/6/17	Contig	SC	SAMEA1469565	GCA_900036415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/415/GCA_900036415.1_7480_8_19	-	st2227
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7308	52	-	CJMR01	50	4891	4537	3/21/15	2/27/17	Scaffold	SC	SAMEA2158686	GCA_001146985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/985/GCA_001146985.1_10607_2_33	-	A58450
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07245	39.6	-	FDUK01	30	2272	2038	2/9/16	3/15/17	Scaffold	SC	SAMEA2239259	GCA_900019455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/455/GCA_900019455.1_11861_5_33	-	2842STDY5644642
Escherichia coli O145:NM str. 2010C-3526	1446596	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.43345	50.4	-	JHFN01	220	5781	5314	4/7/14	2/25/17	Scaffold	CDC	SAMN02352974	GCA_000615415.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/415/GCA_000615415.2_Ec2010C-3526	25103754	2010C-3526
Escherichia coli O121:H19 str. 2010C-3609	1446560	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.24911	50.3	-	JHFM01	206	5613	5173	4/7/14	2/25/17	Scaffold	CDC	SAMN02352975	GCA_000615455.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/455/GCA_000615455.2_Ec2010C-3609	25103754	2010C-3609
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04793	39.6	-	FDUQ01	24	2234	2011	2/9/16	3/13/17	Scaffold	SC	SAMEA2239271	GCA_900019465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/465/GCA_900019465.1_11861_5_46	-	2842STDY5644654
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72469	52	-	CJBR01	56	4895	4514	3/21/15	2/27/17	Scaffold	SC	SAMEA2156911	GCA_001147085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/085/GCA_001147085.1_10493_1_33	-	MDUST201
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.89745	32.7	-	FFOY01	61	3052	2869	2/9/16	3/6/17	Contig	SC	SAMEA1469541	GCA_900036425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/425/GCA_900036425.1_7480_8_88	-	st2534
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81189	32.7	-	FFOQ01	69	2939	2760	2/9/16	3/6/17	Contig	SC	SAMEA1317545	GCA_900036885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/885/GCA_900036885.1_7469_7_78	-	st2107
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.74108	52.1	-	CILK01	55	4916	4568	3/21/15	2/27/17	Scaffold	SC	SAMEA1406359	GCA_001147545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/545/GCA_001147545.1_7468_7_73	-	IB5360
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0133	39.7	-	FDWU01	29	2252	2016	2/9/16	3/13/17	Scaffold	SC	SAMEA2238341	GCA_900019475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/475/GCA_900019475.1_11860_4_68	-	2842STDY5643710
Escherichia coli O111:NM str. 2010C-3977	1446518	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.0821	50.4	-	JHFG01	221	5503	5020	4/7/14	2/25/17	Scaffold	CDC	SAMN02352981	GCA_000615575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/575/GCA_000615575.2_Ec2010C-3977	25103754	2010C-3977
Escherichia coli O111:NM str. 2010C-4086	1446519	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.27982	50.3	-	JHFF01	212	5737	5238	4/7/14	2/25/17	Scaffold	CDC	SAMN02352982	GCA_000615605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/605/GCA_000615605.2_Ec2010C-4086	25103754	2010C-4086
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11756	39.6	-	FDYE01	36	2320	2081	2/9/16	3/13/17	Scaffold	SC	SAMEA2238399	GCA_900019485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/485/GCA_900019485.1_11860_5_29	-	2842STDY5643769
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71938	52	-	CJAO01	54	4883	4525	3/21/15	2/27/17	Scaffold	SC	SAMEA2155697	GCA_001147765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/147/765/GCA_001147765.1_10492_1_63	-	MDUST337
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.79827	32.7	-	FFPV01	34	2889	2736	2/9/16	3/5/17	Contig	SC	SAMEA1317542	GCA_900036895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/895/GCA_900036895.1_8728_5_33	-	st1931
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80102	32.7	-	FFPW01	58	2889	2744	2/9/16	3/6/17	Contig	SC	SAMEA1469630	GCA_900036905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/905/GCA_900036905.1_7480_8_28	-	st2261
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74712	52.1	-	CJSU01	49	4915	4542	3/21/15	2/27/17	Scaffold	SC	SAMEA1903866	GCA_001148005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/005/GCA_001148005.1_9475_6_39	-	1032927
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.97942	39.7	-	FEBV01	25	2170	1948	2/9/16	3/13/17	Scaffold	SC	SAMEA2238559	GCA_900019495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/495/GCA_900019495.1_11860_6_93	-	2842STDY5643930
Escherichia coli O111:NM str. 2010C-4221	1446520	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.0553	50.4	-	JHFE01	202	5441	4991	4/7/14	2/25/17	Scaffold	CDC	SAMN02352984	GCA_000615655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/655/GCA_000615655.2_Ec2010C-4221	25103754	2010C-4221
Escherichia coli O157:H7 str. 2011EL-2101	1446633	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.30175	50.3	-	JHKS01	183	5657	5248	4/7/14	2/23/17	Scaffold	CDC	SAMN02353047	GCA_000615695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/695/GCA_000615695.1_Ec2011EL-2101	25103754	2011EL-2101
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10463	39.6	-	FEBZ01	39	2305	2071	2/9/16	3/13/17	Scaffold	SC	SAMEA2238565	GCA_900019505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/505/GCA_900019505.1_11861_1_3	-	2842STDY5643937
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.77897	52.1	-	CILH01	60	4970	4610	3/21/15	2/27/17	Scaffold	SC	SAMEA2162674	GCA_001148085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/085/GCA_001148085.1_10562_2_7	-	MDUST137
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84177	32.7	-	FFQA01	42	2982	2796	2/9/16	3/6/17	Contig	SC	SAMEA1464486	GCA_900036915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/915/GCA_900036915.1_7748_6_85	-	st1014S
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83393	32.7	-	FFQC01	34	2934	2780	2/9/16	3/5/17	Contig	SC	SAMEA1568642	GCA_900036925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/925/GCA_900036925.1_8490_3_2	-	st833
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73998	52	-	CJER01	58	4904	4521	3/21/15	2/27/17	Scaffold	SC	SAMEA2158192	GCA_001148105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/105/GCA_001148105.1_10541_2_51	-	MDUST342
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11813	39.5	-	FEEJ01	51	2337	2079	2/9/16	3/12/17	Scaffold	SC	SAMEA2238677	GCA_900019515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/515/GCA_900019515.1_11861_2_16	-	2842STDY5644050
Escherichia coli O157:H7 str. 2011EL-2103	1446634	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.30709	50.2	-	JHKR01	197	5671	5243	4/7/14	2/25/17	Scaffold	CDC	SAMN02353048	GCA_000615745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/745/GCA_000615745.2_Ec2011EL-2103	25103754	2011EL-2103
Escherichia coli O157:H7 str. 2011EL-2104	1446635	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.30801	50.2	-	JHKQ01	189	5681	5251	4/7/14	2/25/17	Scaffold	CDC	SAMN02353049	GCA_000615785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/785/GCA_000615785.2_Ec2011EL-2104	25103754	2011EL-2104
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08668	39.5	-	FEEG01	59	2318	2033	2/9/16	3/15/17	Scaffold	SC	SAMEA2238676	GCA_900019525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/525/GCA_900019525.1_11861_2_15	-	2842STDY5644049
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72042	52	-	CJPN01	47	4879	4517	3/21/15	2/27/17	Scaffold	SC	SAMEA1572835	GCA_001148225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/225/GCA_001148225.1_8490_5_18	-	MDUST18
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87373	32.7	-	FFQI01	38	3019	2838	2/9/16	3/5/17	Contig	SC	SAMEA1568613	GCA_900036935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/935/GCA_900036935.1_8490_3_8	-	st855
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8179	32.7	-	FFQL01	37	2904	2751	2/9/16	3/5/17	Contig	SC	SAMEA1568610	GCA_900036945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/945/GCA_900036945.1_8490_3_11	-	st865
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73553	52	-	CIZN01	61	4894	4536	3/21/15	2/27/17	Scaffold	SC	SAMEA2161003	GCA_001148325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/325/GCA_001148325.1_10492_1_34	-	MDUST226
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04772	39.6	-	FEEU01	27	2256	2020	2/9/16	3/13/17	Scaffold	SC	SAMEA2238701	GCA_900019535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/535/GCA_900019535.1_11861_2_40	-	2842STDY5644074
Escherichia coli O157:H7 str. 2011EL-2105	1446636	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.30201	50.2	-	JHKP01	197	5675	5246	4/7/14	2/25/17	Scaffold	CDC	SAMN02353050	GCA_000615815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/815/GCA_000615815.2_Ec2011EL-2105	25103754	2011EL-2105
Escherichia coli O157:H7 str. 2011EL-2106	1446637	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.30767	50.2	-	JHKO01	191	5670	5235	4/7/14	2/25/17	Scaffold	CDC	SAMN02353051	GCA_000615865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/865/GCA_000615865.2_Ec2011EL-2106	25103754	2011EL-2106
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05949	39.5	-	FCPV01	37	2269	2042	2/6/16	3/13/17	Scaffold	SC	SAMEA2238747	GCA_900019545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/545/GCA_900019545.1_11861_2_86	-	2842STDY5644120
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72155	52	-	CJGG01	52	4878	4519	3/21/15	2/27/17	Scaffold	SC	SAMEA2146059	GCA_001148625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/625/GCA_001148625.1_10561_2_63	-	np67
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87529	32.7	-	FFOK01	78	3003	2848	2/9/16	3/5/17	Contig	SC	SAMEA1317357	GCA_900037595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/595/GCA_900037595.1_7469_7_3	-	st1748
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82285	32.7	-	FFON01	61	2918	2768	2/9/16	3/6/17	Contig	SC	SAMEA1317539	GCA_900037605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/605/GCA_900037605.1_7469_7_64	-	st2003
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.68925	52.1	-	CJCS01	52	4844	4478	3/21/15	2/27/17	Scaffold	SC	SAMEA2152534	GCA_001148665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/665/GCA_001148665.1_10493_1_77	-	MDUST352
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07811	39.7	-	FCSE01	36	2307	2065	2/6/16	3/15/17	Scaffold	SC	SAMEA2239069	GCA_900019555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/555/GCA_900019555.1_11860_7_28	-	2842STDY5644449
Escherichia coli O157:H7 str. 2011EL-2107	1446638	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.30846	50.2	-	JHKN01	181	5682	5241	4/7/14	2/25/17	Scaffold	CDC	SAMN02353052	GCA_000615925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/925/GCA_000615925.2_Ec2011EL-2107	25103754	2011EL-2107
Escherichia coli O157:H7 str. 2011EL-2108	1446639	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.31341	50.2	-	JHKM01	208	5679	5254	4/7/14	2/25/17	Scaffold	CDC	SAMN02353053	GCA_000615965.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/615/965/GCA_000615965.2_Ec2011EL-2108	25103754	2011EL-2108
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1153	39.5	-	FCSQ01	58	2350	2082	2/6/16	3/13/17	Scaffold	SC	SAMEA2239090	GCA_900019565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/565/GCA_900019565.1_11860_7_51	-	2842STDY5644471
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74088	52.1	-	CJUM01	51	4931	4578	3/21/15	2/27/17	Scaffold	SC	SAMEA2056499	GCA_001148825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/825/GCA_001148825.1_9870_8_17	-	2005-010587
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.7882	32.7	-	FGCD01	26	2901	2732	2/10/16	3/5/17	Contig	SC	SAMEA1464722	GCA_900037635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/635/GCA_900037635.1_8728_5_24	-	st757
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.89979	32.7	-	FGCE01	61	3056	2861	2/10/16	3/5/17	Contig	SC	SAMEA1464700	GCA_900037645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/645/GCA_900037645.1_7712_8_47	-	st762
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72419	52	-	CEZC01	59	4879	4511	3/11/15	2/27/17	Scaffold	SC	SAMEA2148844	GCA_001148885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/885/GCA_001148885.1_10562_2_59	-	MDUST369
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.14359	39.7	-	FCVJ01	38	2366	2118	2/6/16	3/5/17	Scaffold	SC	SAMEA2238877	GCA_900019575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/575/GCA_900019575.1_11861_3_23	-	2842STDY5644252
Escherichia coli O157:H7 str. 2011EL-2109	1446640	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.31266	50.2	-	JHKL01	195	5684	5252	4/7/14	2/25/17	Scaffold	CDC	SAMN02353054	GCA_000616005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/005/GCA_000616005.2_Ec2011EL-2109	25103754	2011EL-2109
Escherichia coli O157:H7 str. 2011EL-2111	1446641	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.3112	50.2	-	JHKK01	202	5691	5242	4/7/14	2/25/17	Scaffold	CDC	SAMN02353055	GCA_000616035.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/035/GCA_000616035.2_Ec2011EL-2111	25103754	2011EL-2111
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05456	39.6	-	FCVL01	36	2272	2021	2/6/16	3/13/17	Scaffold	SC	SAMEA2238880	GCA_900019585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/585/GCA_900019585.1_11861_3_26	-	2842STDY5644255
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.83235	52	-	CIXQ01	55	5028	4622	3/21/15	2/27/17	Scaffold	SC	SAMEA2072655	GCA_001148945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/148/945/GCA_001148945.1_10349_1_55	-	ERL102275
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8456	32.7	-	FGCH01	48	2935	2784	2/10/16	3/5/17	Contig	SC	SAMEA1464183	GCA_900037655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/655/GCA_900037655.1_7712_8_51	-	st766
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78894	32.7	-	FGCM01	37	2874	2733	2/10/16	3/5/17	Contig	SC	SAMEA1464535	GCA_900037665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/665/GCA_900037665.1_7712_8_58	-	st787
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71989	52	-	CIZQ01	56	4885	4514	3/21/15	2/27/17	Scaffold	SC	SAMEA2146457	GCA_001149165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/165/GCA_001149165.1_10492_1_4	-	MDUST121
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13517	39.5	-	FCVM01	31	2362	2137	2/6/16	3/13/17	Scaffold	SC	SAMEA2238882	GCA_900019595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/595/GCA_900019595.1_11861_3_28	-	2842STDY5644257
Escherichia coli O157:H7 str. 2011EL-2112	1446642	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.29411	50.2	-	JHKJ01	190	5635	5214	4/7/14	2/25/17	Scaffold	CDC	SAMN02353056	GCA_000616075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/075/GCA_000616075.2_Ec2011EL-2112	25103754	2011EL-2112
Escherichia coli O121:H19 str. 2011C-3216	1446571	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.21349	50.5	-	JHLZ01	193	5571	5112	4/7/14	2/25/17	Scaffold	CDC	SAMN02353018	GCA_000616135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/135/GCA_000616135.2_Ec2011C-3216	25103754	2011C-3216
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0591	39.5	-	FCWA01	37	2282	2043	2/6/16	3/12/17	Scaffold	SC	SAMEA2238906	GCA_900019605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/605/GCA_900019605.1_11861_3_54	-	2842STDY5644281
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74251	52.1	-	CJMK01	53	4898	4531	3/21/15	2/27/17	Scaffold	SC	SAMEA2148889	GCA_001149685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/685/GCA_001149685.1_10607_2_14	-	BKQ2KZ
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82595	32.7	-	FGDP01	66	2923	2781	2/10/16	3/5/17	Contig	SC	SAMEA1464301	GCA_900037675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/675/GCA_900037675.1_7554_6_27	-	st172
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82526	32.7	-	FGDT01	57	2925	2776	2/10/16	3/5/17	Contig	SC	SAMEA1464250	GCA_900037685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/685/GCA_900037685.1_7554_6_39	-	st203
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72168	52	-	CJGJ01	53	4888	4509	3/21/15	2/27/17	Scaffold	SC	SAMEA2156754	GCA_001149745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/745/GCA_001149745.1_10562_2_11	-	MDUST148
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0808	39.6	-	FCWX01	52	2298	2062	2/6/16	3/13/17	Scaffold	SC	SAMEA2382569	GCA_900019615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/615/GCA_900019615.1_12673_6_24	-	2842STDY5753109
Escherichia coli O111:NM str. 2011C-3362	1446529	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.23343	50.3	-	JHLW01	214	5682	5187	4/7/14	2/25/17	Scaffold	CDC	SAMN02353023	GCA_000616195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/195/GCA_000616195.2_Ec2011C-3362	25103754	2011C-3362
Escherichia coli O121:H19 str. 2011C-3500	1446572	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.26434	50.3	-	JHLT01	202	5631	5180	4/7/14	2/25/17	Scaffold	CDC	SAMN02353026	GCA_000616225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/225/GCA_000616225.2_Ec2011C-3500	25103754	2011C-3500
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.97507	39.9	-	FCYT01	51	2187	1907	2/6/16	3/13/17	Scaffold	SC	SAMEA2674583	GCA_900019625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/625/GCA_900019625.1_14355_8_56	-	2842STDY5881843
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74664	52.1	-	CJTK01	48	4916	4548	3/21/15	2/27/17	Scaffold	SC	SAMEA1903887	GCA_001149885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/885/GCA_001149885.1_9475_6_61	-	1029975
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86364	32.7	-	FGEM01	70	2942	2804	2/10/16	3/6/17	Contig	SC	SAMEA1317479	GCA_900037695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/695/GCA_900037695.1_7414_7_72	-	st427
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.94894	32.7	-	FGFH01	62	3108	2907	2/10/16	3/5/17	Contig	SC	SAMEA1464504	GCA_900037715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/715/GCA_900037715.1_7712_8_16	-	st677
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.83162	52	-	CJBW01	55	5047	4636	3/21/15	2/27/17	Scaffold	SC	SAMEA2145822	GCA_001149905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/905/GCA_001149905.1_10493_1_43	-	MDUST232
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.03689	39.7	-	FCZE01	54	2232	1971	2/6/16	3/13/17	Scaffold	SC	SAMEA2674628	GCA_900019635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/635/GCA_900019635.1_14412_3_6	-	2842STDY5881888
Escherichia coli O121:H19 str. 2011C-3537	1446573	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.12115	50.5	-	JHLR01	189	5437	5000	4/7/14	2/23/17	Scaffold	CDC	SAMN02353028	GCA_000616245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/245/GCA_000616245.1_Ec2011C-3537	25103754	2011C-3537
Escherichia coli O111:NM str. 2011C-3573	1446530	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.16685	50.3	-	JHLQ01	186	5593	5122	4/7/14	2/23/17	Scaffold	CDC	SAMN02353029	GCA_000616265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/265/GCA_000616265.1_Ec2011C-3573	25103754	2011C-3573
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09884	39.5	-	FCZQ01	39	2303	2037	2/6/16	3/13/17	Scaffold	SC	SAMEA2674682	GCA_900019645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/645/GCA_900019645.1_14412_3_53	-	2842STDY5881936
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72713	52	-	CJPM01	43	4882	4529	3/21/15	2/27/17	Scaffold	SC	SAMEA1572851	GCA_001150065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/065/GCA_001150065.1_8490_5_20	-	MDUST20
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83631	32.7	-	FGFY01	42	2925	2783	2/10/16	3/5/17	Contig	SC	SAMEA1464499	GCA_900037725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/725/GCA_900037725.1_7712_8_91	-	st857
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80171	32.7	-	FGGA01	41	2895	2749	2/10/16	3/6/17	Contig	SC	SAMEA1464394	GCA_900037735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/735/GCA_900037735.1_7712_8_93	-	st864
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72004	52	-	CJCP01	52	4880	4518	3/21/15	2/27/17	Scaffold	SC	SAMEA2149660	GCA_001150805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/150/805/GCA_001150805.1_10493_1_76	-	MDUST351
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99272	39.8	-	FDAY01	43	2188	1929	2/6/16	3/8/17	Scaffold	SC	SAMEA2382635	GCA_900019655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/655/GCA_900019655.1_12673_6_90	-	2842STDY5753175
Escherichia coli O111:NM str. 2011C-3632	1446531	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.21496	50.4	-	JHLO01	197	5637	5155	4/7/14	2/25/17	Scaffold	CDC	SAMN02353032	GCA_000616305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/305/GCA_000616305.2_Ec2011C-3632	25103754	2011C-3632
Escherichia coli O111:NM str. 2011C-3679	1446532	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.06328	50.4	-	JHLM01	193	5441	4995	4/7/14	2/25/17	Scaffold	CDC	SAMN02353034	GCA_000616325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/325/GCA_000616325.2_Ec2011C-3679	25103754	2011C-3679
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05337	39.6	-	FDBM01	30	2271	2026	2/6/16	3/13/17	Scaffold	SC	SAMEA2382649	GCA_900019665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/665/GCA_900019665.1_12673_7_9	-	2842STDY5753190
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73349	52	-	CJCI01	58	4896	4542	3/21/15	2/27/17	Scaffold	SC	SAMEA2144857	GCA_001151045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/045/GCA_001151045.1_10493_1_64	-	MDUST298
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78837	32.7	-	FGGB01	58	2875	2723	2/10/16	3/6/17	Contig	SC	SAMEA1317559	GCA_900037745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/745/GCA_900037745.1_7414_8_48	-	st866
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81573	32.7	-	FGGG01	57	2901	2756	2/10/16	3/5/17	Contig	SC	SAMEA1464175	GCA_900037755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/755/GCA_900037755.1_7564_8_8	-	st885
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72337	52	-	CIZA01	58	4884	4521	3/21/15	2/27/17	Scaffold	SC	SAMEA2154862	GCA_001151125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/125/GCA_001151125.1_10492_1_18	-	MDUST161
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12418	39.6	-	FDCD01	34	2322	2089	2/6/16	3/13/17	Scaffold	SC	SAMEA2382666	GCA_900019675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/675/GCA_900019675.1_12673_7_26	-	2842STDY5753207
Escherichia coli O103:H2 str. 2011C-3750	1446505	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.55535	50.3	-	JHLL01	464	6064	5540	4/7/14	2/25/17	Scaffold	CDC	SAMN02353035	GCA_000616345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/345/GCA_000616345.2_Ec2011C-3750	25103754	2011C-3750
Escherichia coli O104:H4 str. 2011EL-1675A	1446507	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.29093	50.5	-	JHLJ01	185	5633	5236	4/7/14	2/25/17	Scaffold	CDC	SAMN02353037	GCA_000616385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/385/GCA_000616385.2_Ec2011EL-1675A	25103754	2011EL-1675A
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12109	39.6	-	FDCK01	57	2332	2062	2/6/16	3/13/17	Scaffold	SC	SAMEA2382673	GCA_900019685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/685/GCA_900019685.1_12673_7_33	-	2842STDY5753214
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72194	52	-	CJFQ01	57	4876	4497	3/21/15	2/27/17	Scaffold	SC	SAMEA2151963	GCA_001151225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/225/GCA_001151225.1_10561_2_44	-	np22
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.93839	32.7	-	FGGK01	85	3063	2910	2/10/16	3/5/17	Contig	SC	SAMEA1317541	GCA_900037765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/765/GCA_900037765.1_7414_8_60	-	st899
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83451	32.7	-	FGGN01	99	2954	2792	2/10/16	3/5/17	Contig	SC	SAMEA1317448	GCA_900037775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/775/GCA_900037775.1_7414_8_66	-	st909
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93475	51.8	-	CJNF01	63	5144	4750	3/21/15	2/27/17	Scaffold	SC	SAMEA2154750	GCA_001151265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/265/GCA_001151265.1_10608_2_34	-	01-2012-003910
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01512	39.7	-	FDDB01	23	2230	2009	2/6/16	3/13/17	Scaffold	SC	SAMEA2382690	GCA_900019695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/695/GCA_900019695.1_12673_7_50	-	2842STDY5753231
Escherichia coli O157:H7 str. 2011EL-2090	1446624	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.36719	50.3	-	JHLI01	196	5766	5347	4/7/14	2/25/17	Scaffold	CDC	SAMN02353038	GCA_000616405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/405/GCA_000616405.2_Ec2011EL-2090	25103754	2011EL-2090
Escherichia coli O157:H7 str. 2011EL-2091	1446625	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.35154	50.3	-	JHLH01	178	5757	5326	4/7/14	2/25/17	Scaffold	CDC	SAMN02353039	GCA_000616425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/425/GCA_000616425.2_Ec2011EL-2091	25103754	2011EL-2091
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.14981	39.6	-	FDDC01	52	2386	2129	2/6/16	3/13/17	Scaffold	SC	SAMEA2382691	GCA_900019705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/705/GCA_900019705.1_12673_7_51	-	2842STDY5753232
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70952	52.1	-	CJXY01	47	4868	4516	3/21/15	2/27/17	Scaffold	SC	SAMEA2056368	GCA_001151325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/325/GCA_001151325.1_9953_5_51	-	A380
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82082	32.7	-	FGGU01	61	2919	2759	2/10/16	3/5/17	Contig	SC	SAMEA1317404	GCA_900037785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/785/GCA_900037785.1_7414_8_80	-	st940
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83577	32.7	-	FGGZ01	62	2930	2777	2/10/16	3/5/17	Contig	SC	SAMEA1317422	GCA_900037795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/795/GCA_900037795.1_7414_8_81	-	st942
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72911	52	-	CIYK01	55	4891	4524	3/21/15	2/27/17	Scaffold	SC	SAMEA2157069	GCA_001151505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/505/GCA_001151505.1_10425_1_13	-	BRD948
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04989	39.5	-	FDFU01	23	2256	2036	2/6/16	3/13/17	Scaffold	SC	SAMEA2382762	GCA_900019715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/715/GCA_900019715.1_12718_4_27	-	2842STDY5753304
Escherichia coli O157:H7 str. 2011EL-2092	1446626	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.34176	50.3	-	JHLG01	173	5725	5321	4/7/14	2/25/17	Scaffold	CDC	SAMN02353040	GCA_000616445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/445/GCA_000616445.2_Ec2011EL-2092	25103754	2011EL-2092
Escherichia coli O157:H7 str. 2011EL-2093	1446627	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.34578	50.3	-	JHLF01	179	5738	5336	4/7/14	2/25/17	Scaffold	CDC	SAMN02353041	GCA_000616465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/465/GCA_000616465.2_Ec2011EL-2093	25103754	2011EL-2093
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00351	39.7	-	FDFX01	35	2205	1990	2/6/16	3/13/17	Scaffold	SC	SAMEA2382765	GCA_900019725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/725/GCA_900019725.1_12718_4_30	-	2842STDY5753307
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.74416	52.1	-	CJOE01	52	4923	4571	3/21/15	2/27/17	Scaffold	SC	SAMEA1406325	GCA_001151725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/725/GCA_001151725.1_7468_7_72	-	IB5359
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83988	32.7	-	FGHV01	59	2951	2795	2/10/16	3/6/17	Contig	SC	SAMEA1464419	GCA_900037815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/815/GCA_900037815.1_7521_5_20	-	st1015
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78586	32.7	-	FGIF01	51	2865	2712	2/10/16	3/5/17	Contig	SC	SAMEA1464317	GCA_900037825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/825/GCA_900037825.1_7521_5_40	-	st1075
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3164	204701	Proteobacteria	Gammaproteobacteria	4.92833	51.8	-	CJRG01	47	5123	4741	3/21/15	2/27/17	Scaffold	SC	SAMEA1572063	GCA_001151825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/825/GCA_001151825.1_8525_3_46	-	Ke467
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07084	39.6	-	FDIA01	40	2251	2003	2/6/16	3/13/17	Scaffold	SC	SAMEA2382820	GCA_900019735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/735/GCA_900019735.1_12718_4_85	-	2842STDY5753362
Escherichia coli O157:H7 str. 2011EL-2094	1446628	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.35403	50.3	-	JHLE01	189	5752	5338	4/7/14	2/25/17	Scaffold	CDC	SAMN02353042	GCA_000616485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/485/GCA_000616485.2_Ec2011EL-2094	25103754	2011EL-2094
Escherichia coli O157:H7 str. 2011EL-2096	1446629	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.34557	50.3	-	JHLD01	178	5740	5335	4/7/14	2/25/17	Scaffold	CDC	SAMN02353043	GCA_000616505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/505/GCA_000616505.2_Ec2011EL-2096	25103754	2011EL-2096
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07187	39.6	-	FDIG01	34	2297	2055	2/6/16	3/13/17	Scaffold	SC	SAMEA2382826	GCA_900019745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/745/GCA_900019745.1_12718_4_91	-	2842STDY5753368
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72729	52	-	CJOQ01	42	4884	4532	3/21/15	2/27/17	Scaffold	SC	SAMEA1572837	GCA_001152105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/105/GCA_001152105.1_8447_8_14	-	MDUST86
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83568	32.7	-	FGII01	53	2928	2778	2/10/16	3/5/17	Contig	SC	SAMEA1464649	GCA_900037835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/835/GCA_900037835.1_7521_5_37	-	st1071
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80127	32.7	-	FGIG01	61	2900	2753	2/10/16	3/6/17	Contig	SC	SAMEA1464284	GCA_900037845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/845/GCA_900037845.1_7521_5_41	-	st1079
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71967	52	-	CJUW01	69	4871	4509	3/21/15	2/27/17	Scaffold	SC	SAMEA2058421	GCA_001152145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/145/GCA_001152145.1_9870_8_37	-	2010-002948
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13251	39.6	-	FDIP01	35	2392	2126	2/6/16	3/6/17	Scaffold	SC	SAMEA2382837	GCA_900019755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/755/GCA_900019755.1_12718_5_7	-	2842STDY5753380
Escherichia coli O157:H7 str. 2011EL-2097	1446630	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.36689	50.3	-	JHLC01	177	5751	5341	4/7/14	2/25/17	Scaffold	CDC	SAMN02353044	GCA_000616525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/525/GCA_000616525.2_Ec2011EL-2097	25103754	2011EL-2097
Escherichia coli O157:H7 str. 2011EL-2098	1446631	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.34634	50.3	-	JHLB01	170	5738	5334	4/7/14	2/25/17	Scaffold	CDC	SAMN02353045	GCA_000616545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/545/GCA_000616545.2_Ec2011EL-2098	25103754	2011EL-2098
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98206	39.7	-	FDJB01	19	2173	1960	2/6/16	3/13/17	Scaffold	SC	SAMEA2382851	GCA_900019765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/765/GCA_900019765.1_12718_5_21	-	2842STDY5753394
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74131	52.1	-	CIWE01	43	4918	4563	3/21/15	2/27/17	Scaffold	SC	SAMEA2067735	GCA_001152345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/345/GCA_001152345.1_10209_5_9	-	2007-007073
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.79121	32.7	-	FGIM01	23	2911	2732	2/10/16	3/5/17	Contig	SC	SAMEA1464242	GCA_900037855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/855/GCA_900037855.1_8728_5_27	-	st1110
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.91224	32.7	-	FGIP01	103	3058	2889	2/10/16	3/5/17	Contig	SC	SAMEA1469661	GCA_900037865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/865/GCA_900037865.1_7480_7_3	-	st1116
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73626	52	-	CJHR01	61	4887	4540	3/21/15	2/27/17	Scaffold	SC	SAMEA2144097	GCA_001152445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/445/GCA_001152445.1_10562_2_56	-	MDUST359
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99105	39.8	-	FDJD01	46	2189	1935	2/6/16	3/13/17	Scaffold	SC	SAMEA2382853	GCA_900019775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/775/GCA_900019775.1_12718_5_23	-	2842STDY5753396
Escherichia coli O157:H7 str. 08-3037	1446613	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.23364	50.3	-	JHKZ01	160	5561	5156	4/7/14	2/25/17	Scaffold	CDC	SAMN02352919	GCA_000616585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/585/GCA_000616585.2_Ec08-3037	25103754	Aug-37
Escherichia coli O157:H7 str. 08-3527	1446614	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.31346	50.3	-	JHKY01	185	5689	5261	4/7/14	2/25/17	Scaffold	CDC	SAMN02352920	GCA_000616605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/605/GCA_000616605.2_Ec08-3527	25103754	Aug-27
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15715	39.6	-	FDJM01	39	2383	2140	2/6/16	3/13/17	Scaffold	SC	SAMEA2382864	GCA_900019785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/785/GCA_900019785.1_12718_5_34	-	2842STDY5753407
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69984	52.1	-	CJHL01	52	4846	4494	3/21/15	2/27/17	Scaffold	SC	SAMEA2159122	GCA_001152705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/705/GCA_001152705.1_10562_2_50	-	MDUST343
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79731	32.7	-	FGIQ01	55	2892	2746	2/10/16	3/6/17	Contig	SC	SAMEA1469641	GCA_900037875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/875/GCA_900037875.1_7480_7_5	-	st1120
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79547	32.7	-	FGIW01	58	2896	2751	2/10/16	3/5/17	Contig	SC	SAMEA1469713	GCA_900037885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/885/GCA_900037885.1_7480_7_14	-	st1141
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69525	52.1	-	CEYB01	53	4854	4495	3/10/15	2/27/17	Scaffold	SC	SAMEA2154128	GCA_001152845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/845/GCA_001152845.1_10492_1_14	-	MDUST149
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09101	39.7	-	FDOH01	34	2311	2083	2/6/16	3/13/17	Scaffold	SC	SAMEA2382996	GCA_900019795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/795/GCA_900019795.1_12754_1_71	-	2842STDY5753540
Escherichia coli O157:H7 str. 08-4169	1446615	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.27091	50.3	-	JHKW01	189	5618	5199	4/7/14	2/25/17	Scaffold	CDC	SAMN02352922	GCA_000616645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/645/GCA_000616645.2_Ec08-4169	25103754	Aug-69
Escherichia coli O145:NM str. 08-4270	1446586	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.50643	50.3	-	JHKV01	259	5891	5392	4/7/14	2/25/17	Scaffold	CDC	SAMN02352923	GCA_000616665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/665/GCA_000616665.2_Ec08-4270	25103754	Aug-70
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11687	39.5	-	FDPY01	37	2340	2097	2/9/16	3/6/17	Scaffold	SC	SAMEA2383040	GCA_900019805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/805/GCA_900019805.1_12754_2_20	-	2842STDY5753585
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.97135	52.1	-	CQHN01	53	5155	4874	3/23/15	2/27/17	Scaffold	SC	SAMEA1568523	GCA_001153005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/005/GCA_001153005.1_8490_2_84	-	CH41
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.76989	32.7	-	FGIY01	70	2840	2690	2/10/16	3/5/17	Contig	SC	SAMEA1469623	GCA_900037895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/895/GCA_900037895.1_7480_7_17	-	st1148
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80835	32.7	-	FGJB01	69	2886	2741	2/10/16	3/5/17	Contig	SC	SAMEA1469627	GCA_900037905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/905/GCA_900037905.1_7480_7_20	-	st1155
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.61411	52.1	-	CJXQ01	44	4753	4403	3/21/15	2/27/17	Scaffold	SC	SAMEA2056365	GCA_001153125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/125/GCA_001153125.1_9953_5_39	-	A365
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10135	39.6	-	FDQC01	52	2322	2063	2/9/16	3/13/17	Scaffold	SC	SAMEA2383044	GCA_900019815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/815/GCA_900019815.1_12754_2_24	-	2842STDY5753589
Escherichia coli O111:NM str. 08-4487	1446515	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.27961	50.2	-	JHKU01	204	5719	5259	4/7/14	2/25/17	Scaffold	CDC	SAMN02352924	GCA_000616685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/685/GCA_000616685.2_Ec08-4487	25103754	Aug-87
Escherichia coli O157:H7 str. 2011EL-2099	1446632	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.34926	50.3	-	JHKT01	175	5755	5335	4/7/14	2/25/17	Scaffold	CDC	SAMN02353046	GCA_000616705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/705/GCA_000616705.2_Ec2011EL-2099	25103754	2011EL-2099
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99918	39.6	-	FEKH01	41	2187	1979	2/9/16	3/5/17	Scaffold	SC	SAMEA2383167	GCA_900019825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/825/GCA_900019825.1_12754_3_52	-	2842STDY5753713
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74322	52.1	-	CJYK01	42	4925	4573	3/21/15	2/27/17	Scaffold	SC	SAMEA2056532	GCA_001153245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/245/GCA_001153245.1_9953_5_66	-	LNT13
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79684	32.7	-	FGJC01	64	2886	2744	2/10/16	3/5/17	Contig	SC	SAMEA1469590	GCA_900037915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/915/GCA_900037915.1_7480_7_23	-	st1163
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84601	32.7	-	FGJE01	90	2957	2802	2/10/16	3/6/17	Contig	SC	SAMEA1469539	GCA_900037935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/935/GCA_900037935.1_7480_7_26	-	st1173
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.77589	52	-	CJFH01	80	4959	4556	3/21/15	2/27/17	Scaffold	SC	SAMEA2149622	GCA_001153265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/265/GCA_001153265.1_10561_2_28	-	np101
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98022	39.7	-	FEKM01	19	2180	1958	2/9/16	3/13/17	Scaffold	SC	SAMEA2383172	GCA_900019835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/835/GCA_900019835.1_12754_3_57	-	2842STDY5753718
Escherichia coli O121:H19 str. 2011C-3072	1446569	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.13756	50.4	-	JHMC01	191	5456	5027	4/7/14	2/25/17	Scaffold	CDC	SAMN02353015	GCA_000616725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/616/725/GCA_000616725.2_Ec2011C-3072	25103754	2011C-3072
Escherichia coli O121:H19 str. 2010C-4732	1446564	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.17044	50.4	-	JHMV01	193	5492	5067	4/7/14	2/25/17	Scaffold	CDC	SAMN02352996	GCA_000617005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/005/GCA_000617005.2_Ec2010C-4732	25103754	2010C-4732
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07714	39.7	-	FELS01	29	2294	2056	2/9/16	3/13/17	Scaffold	SC	SAMEA2383204	GCA_900019845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/845/GCA_900019845.1_12754_3_89	-	2842STDY5753750
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7375	52	-	CJDX01	61	4905	4545	3/21/15	2/27/17	Scaffold	SC	SAMEA2152847	GCA_001153405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/405/GCA_001153405.1_10541_2_27	-	MDUST293
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79807	32.7	-	FGJJ01	46	2891	2745	2/10/16	3/5/17	Contig	SC	SAMEA1469672	GCA_900037945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/945/GCA_900037945.1_7480_7_33	-	st1194
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.89841	32.7	-	FGJK01	74	3018	2859	2/10/16	3/5/17	Contig	SC	SAMEA1469668	GCA_900037955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/955/GCA_900037955.1_7480_7_35	-	st1202
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72209	52	-	CJQH01	42	4878	4522	3/21/15	2/27/17	Scaffold	SC	SAMEA1572856	GCA_001153465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/465/GCA_001153465.1_8490_6_42	-	MDUST42
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11396	39.4	-	FELV01	26	2326	2089	2/9/16	3/13/17	Scaffold	SC	SAMEA2383207	GCA_900019855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/855/GCA_900019855.1_12754_3_92	-	2842STDY5753753
Escherichia coli O111:NM str. 2010C-4715	1446523	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.28182	50.3	-	JHMW01	218	5740	5252	4/7/14	2/25/17	Scaffold	CDC	SAMN02352995	GCA_000617025.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/025/GCA_000617025.2_Ec2010C-4715	25103754	2010C-4715
Escherichia coli O103:H11 str. 04-3023	1446501	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	4.5225	50.7	-	JHOD01	144	4644	4338	4/7/14	2/25/17	Scaffold	CDC	SAMN02352887	GCA_000617045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/045/GCA_000617045.2_Ec04-3023	25103754	Apr-23
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00061	39.6	-	FEMG01	19	2198	1978	2/9/16	3/13/17	Scaffold	SC	SAMEA2383220	GCA_900019865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/865/GCA_900019865.1_12754_4_10	-	2842STDY5753767
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.57723	52.1	-	CJBX01	52	4721	4364	3/21/15	2/27/17	Scaffold	SC	SAMEA2150728	GCA_001153665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/665/GCA_001153665.1_10493_1_40	-	MDUST215
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8098	32.7	-	FGJM01	67	2897	2762	2/10/16	3/5/17	Contig	SC	SAMEA1469675	GCA_900037965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/965/GCA_900037965.1_7480_7_39	-	st1211
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82927	32.7	-	FGJO01	81	2940	2784	2/10/16	3/5/17	Contig	SC	SAMEA1469648	GCA_900037975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/975/GCA_900037975.1_7480_7_41	-	st1216
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3164	204701	Proteobacteria	Gammaproteobacteria	4.93518	51.8	-	CJRN01	52	5135	4756	3/21/15	2/27/17	Scaffold	SC	SAMEA1692268	GCA_001153825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/825/GCA_001153825.1_8615_4_29	-	Ke062
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12765	39.6	-	FEMN01	52	2349	2136	2/9/16	3/5/17	Scaffold	SC	SAMEA2383227	GCA_900019875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/875/GCA_900019875.1_12754_4_17	-	2842STDY5753774
Escherichia coli O45:H2 str. 01-3147	1446740	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.23017	50.5	-	JHOA01	250	5706	5236	4/7/14	2/25/17	Scaffold	CDC	SAMN02352892	GCA_000617125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/125/GCA_000617125.2_Ec01-3147	25103754	Jan-47
Escherichia coli O81:NM str. 02-3012	1446761	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.17596	50.6	-	JHNZ01	196	5565	5086	4/7/14	2/25/17	Scaffold	CDC	SAMN02352893	GCA_000617145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/145/GCA_000617145.2_Ec02-3012	25103754	Feb-12
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04259	39.6	-	FEPC01	19	2239	2015	2/9/16	3/5/17	Scaffold	SC	SAMEA2674696	GCA_900019885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/885/GCA_900019885.1_14412_3_60	-	2842STDY5881943
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9311	51.8	-	CJNX01	54	5134	4754	3/21/15	2/27/17	Scaffold	SC	SAMEA1968600	GCA_001154045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/045/GCA_001154045.1_10608_2_9	-	2010-012486
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.89638	32.7	-	FFQE01	37	3056	2864	2/9/16	3/6/17	Contig	SC	SAMEA1568640	GCA_900038095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/095/GCA_900038095.1_8490_3_4	-	st842
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80055	32.7	-	FFWP01	48	2897	2748	2/10/16	3/6/17	Contig	SC	SAMEA1464323	GCA_900038195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/195/GCA_900038195.1_7554_6_29	-	st176
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7238	52	-	CJFK01	62	4896	4515	3/21/15	2/27/17	Scaffold	SC	SAMEA2162257	GCA_001154225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/225/GCA_001154225.1_10561_2_31	-	np13
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05303	39.7	-	FDRT01	42	2275	2046	2/9/16	3/6/17	Scaffold	SC	SAMEA2239179	GCA_900019995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/019/995/GCA_900019995.1_11860_8_47	-	2842STDY5644561
Escherichia coli O28ac:NM str. 02-3404	1446737	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	4.72534	50.6	-	JHNY01	397	5041	4495	4/7/14	2/25/17	Scaffold	CDC	SAMN02352894	GCA_000617165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/165/GCA_000617165.2_Ec02-3404	25103754	Feb-04
Escherichia coli O121:H19 str. 03-3227	1446552	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.12562	50.4	-	JHNX01	202	5435	5006	4/7/14	2/25/17	Scaffold	CDC	SAMN02352895	GCA_000617185.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/185/GCA_000617185.2_Ec03-3227	25103754	Mar-27
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08774	39.5	-	FDVZ01	40	2305	2072	2/9/16	3/13/17	Scaffold	SC	SAMEA2238300	GCA_900020005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/005/GCA_900020005.1_11860_4_25	-	2842STDY5643669
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.97905	52.1	-	CQGT01	52	5158	4881	3/23/15	2/27/17	Scaffold	SC	SAMEA1568487	GCA_001154285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/285/GCA_001154285.1_8490_2_70	-	CH27
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83101	32.7	-	FFWO01	49	2918	2779	2/10/16	3/5/17	Contig	SC	SAMEA1464337	GCA_900038205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/205/GCA_900038205.1_7554_6_31	-	st180
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.831	32.7	-	FFWS01	45	2920	2780	2/10/16	3/5/17	Contig	SC	SAMEA1464209	GCA_900038215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/215/GCA_900038215.1_7554_6_32	-	st185
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.97475	52.1	-	CQHH01	60	5155	4874	3/23/15	2/27/17	Scaffold	SC	SAMEA1568493	GCA_001154585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/585/GCA_001154585.1_8490_2_47	-	CH4
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01432	39.8	-	FDWC01	27	2250	2012	2/9/16	3/12/17	Scaffold	SC	SAMEA2238306	GCA_900020015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/015/GCA_900020015.1_11860_4_32	-	2842STDY5643675
Escherichia coli O111:NM str. 03-3484	1446513	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.05367	50.4	-	JHNU01	190	5443	4986	4/7/14	2/25/17	Scaffold	CDC	SAMN02352898	GCA_000617245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/245/GCA_000617245.2_Ec03-3484	25103754	Mar-84
Escherichia coli O111:NM str. 04-3211	1446514	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.08139	50.4	-	JHNS01	191	5453	4991	4/7/14	2/23/17	Scaffold	CDC	SAMN02352900	GCA_000617265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/265/GCA_000617265.1_Ec04-3211	25103754	Apr-11
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08875	39.6	-	FDWI01	28	2281	2040	2/9/16	3/13/17	Scaffold	SC	SAMEA2238317	GCA_900020025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/025/GCA_900020025.1_11860_4_44	-	2842STDY5643686
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73554	52	-	CJSF01	46	4901	4535	3/21/15	2/27/17	Scaffold	SC	SAMEA1903837	GCA_001154765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/765/GCA_001154765.1_9475_6_10	-	1013486
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.7976	32.7	-	FFWQ01	51	2882	2748	2/10/16	3/6/17	Contig	SC	SAMEA1464225	GCA_900038225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/225/GCA_900038225.1_7554_6_34	-	st187
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81693	32.7	-	FFWX01	48	2907	2756	2/10/16	3/5/17	Contig	SC	SAMEA1464516	GCA_900038235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/235/GCA_900038235.1_7554_6_43	-	st213
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73263	52	-	CJEG01	54	4889	4527	3/21/15	2/27/17	Scaffold	SC	SAMEA2156780	GCA_001154865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/154/865/GCA_001154865.1_10541_2_37	-	MDUST315
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10579	39.6	-	FDXK01	42	2313	2050	2/9/16	3/6/17	Scaffold	SC	SAMEA2238364	GCA_900020035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/035/GCA_900020035.1_11860_4_90	-	2842STDY5643733
Escherichia coli O121:H19 str. 06-3003	1446553	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.16577	50.3	-	JHNR01	208	5482	5046	4/7/14	2/25/17	Scaffold	CDC	SAMN02352901	GCA_000617285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/285/GCA_000617285.2_Ec06-3003	25103754	Jun-03
Escherichia coli O118:H16 str. 06-3256	1446545	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.6124	50.4	-	JHNQ01	362	6224	5693	4/7/14	2/25/17	Scaffold	CDC	SAMN02352902	GCA_000617305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/305/GCA_000617305.2_Ec06-3256	25103754	Jun-56
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06022	39.7	-	FDYH01	17	2287	2053	2/9/16	3/13/17	Scaffold	SC	SAMEA2238402	GCA_900020045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/045/GCA_900020045.1_11860_5_33	-	2842STDY5643772
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7251	52	-	CJXR01	52	4884	4524	3/21/15	2/27/17	Scaffold	SC	SAMEA1969848	GCA_001155025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/025/GCA_001155025.1_9953_5_42	-	A369
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87466	32.8	-	FFXA01	65	3014	2869	2/10/16	3/6/17	Contig	SC	SAMEA1464466	GCA_900038245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/245/GCA_900038245.1_7554_6_49	-	st228
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.95027	32.7	-	FFXC01	77	3108	2918	2/10/16	3/6/17	Contig	SC	SAMEA1464458	GCA_900038255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/255/GCA_900038255.1_7554_6_50	-	st232
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3164	204701	Proteobacteria	Gammaproteobacteria	4.93251	51.8	-	CJRC01	51	5125	4743	3/21/15	2/27/17	Scaffold	SC	SAMEA1571916	GCA_001155045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/045/GCA_001155045.1_8525_3_37	-	Ke458
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.9916	39.8	-	FDZJ01	49	2180	1925	2/9/16	3/13/17	Scaffold	SC	SAMEA2238447	GCA_900020055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/055/GCA_900020055.1_11860_5_77	-	2842STDY5643817
Escherichia coli O145:NM str. 06-3484	1446585	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.21755	50.4	-	JHNN01	192	5505	5049	4/7/14	2/23/17	Scaffold	CDC	SAMN02352905	GCA_000617345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/345/GCA_000617345.1_Ec06-3484	25103754	Jun-84
Escherichia coli O79:H7 str. 06-3501	1446760	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.08983	50.8	-	JHNM01	106	5348	5009	4/7/14	2/25/17	Scaffold	CDC	SAMN02352906	GCA_000617365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/365/GCA_000617365.2_Ec06-3501	25103754	Jun-01
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.21642	39.5	-	FEAN01	83	2431	2159	2/9/16	3/13/17	Scaffold	SC	SAMEA2238502	GCA_900020065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/065/GCA_900020065.1_11860_6_36	-	2842STDY5643873
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72254	52	-	CJPW01	39	4878	4520	3/21/15	2/27/17	Scaffold	SC	SAMEA1572866	GCA_001155365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/365/GCA_001155365.1_8490_5_36	-	MDUST36
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80058	32.7	-	FFXD01	56	2884	2749	2/10/16	3/5/17	Contig	SC	SAMEA1464286	GCA_900038265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/265/GCA_900038265.1_7554_6_52	-	st234
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80055	32.7	-	FFXF01	49	2892	2742	2/10/16	3/5/17	Contig	SC	SAMEA1464319	GCA_900038275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/275/GCA_900038275.1_7554_6_53	-	st235
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72123	52	-	CJGD01	55	4884	4505	3/21/15	2/27/17	Scaffold	SC	SAMEA2150321	GCA_001155405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/405/GCA_001155405.1_10561_2_61	-	ERL102292
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06851	39.6	-	FECX01	28	2282	2049	2/9/16	3/13/17	Scaffold	SC	SAMEA2238607	GCA_900020075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/075/GCA_900020075.1_11861_1_45	-	2842STDY5643979
Escherichia coli O118:H16 str. 06-3612	1446546	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.47503	50.3	-	JHNK01	279	5982	5502	4/7/14	2/25/17	Scaffold	CDC	SAMN02352908	GCA_000617405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/405/GCA_000617405.2_Ec06-3612	25103754	Jun-12
Escherichia coli O157:H7 str. 06-3745	1446609	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.32573	50.3	-	JHNI01	181	5722	5281	4/7/14	2/25/17	Scaffold	CDC	SAMN02352910	GCA_000617445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/445/GCA_000617445.2_Ec06-3745	25103754	Jun-45
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15636	39.5	-	FEDA01	63	2374	2106	2/9/16	3/13/17	Scaffold	SC	SAMEA2238613	GCA_900020085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/085/GCA_900020085.1_11861_1_51	-	2842STDY5643985
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71886	52	-	CJBA01	44	4875	4518	3/21/15	2/27/17	Scaffold	SC	SAMEA2155724	GCA_001155445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/445/GCA_001155445.1_10492_1_8	-	MDUST133
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86704	32.7	-	FFXE01	43	3007	2829	2/10/16	3/6/17	Contig	SC	SAMEA1464310	GCA_900038285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/285/GCA_900038285.1_7554_6_55	-	st241
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83259	32.7	-	FFXG01	47	2926	2780	2/10/16	3/5/17	Contig	SC	SAMEA1464247	GCA_900038295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/295/GCA_900038295.1_7554_6_56	-	st246
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.94384	52.1	-	CQHG01	53	5123	4844	3/22/15	2/27/17	Scaffold	SC	SAMEA1568537	GCA_001155485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/485/GCA_001155485.1_8490_2_73	-	CH30
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04851	39.6	-	FEDF01	29	2257	2014	2/9/16	3/5/17	Scaffold	SC	SAMEA2239313	GCA_900020095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/095/GCA_900020095.1_11861_5_88	-	2842STDY5644697
Escherichia coli O111:NM str. 2010C-4735	1446524	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.40907	50.4	-	JHMU01	250	5887	5383	4/7/14	2/25/17	Scaffold	CDC	SAMN02352997	GCA_000617465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/465/GCA_000617465.2_Ec2010C-4735	25103754	2010C-4735
Escherichia coli O111:NM str. 2010C-4746	1446525	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.12345	50.4	-	JHMT01	190	5499	5048	4/7/14	2/25/17	Scaffold	CDC	SAMN02352998	GCA_000617485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/485/GCA_000617485.2_Ec2010C-4746	25103754	2010C-4746
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99266	39.8	-	FEDG01	48	2197	1928	2/9/16	3/15/17	Scaffold	SC	SAMEA2238624	GCA_900020105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/105/GCA_900020105.1_11861_1_62	-	2842STDY5643996
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74751	52.1	-	CJTR01	46	4924	4558	3/21/15	2/27/17	Scaffold	SC	SAMEA1903895	GCA_001155705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/705/GCA_001155705.1_9475_6_71	-	1032168
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79732	32.7	-	FFXY01	53	2885	2741	2/10/16	3/5/17	Contig	SC	SAMEA1464491	GCA_900038305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/305/GCA_900038305.1_7554_6_81	-	st311
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81136	32.6	-	FFXZ01	26	2927	2772	2/10/16	3/5/17	Contig	SC	SAMEA1464506	GCA_900038315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/315/GCA_900038315.1_7554_6_83	-	st314
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93316	51.8	-	CJVE01	78	5119	4745	3/21/15	2/27/17	Scaffold	SC	SAMEA2058424	GCA_001155745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/745/GCA_001155745.1_9870_8_46	-	2002-216622
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11862	39.5	-	FEDT01	39	2343	2095	2/9/16	3/13/17	Scaffold	SC	SAMEA2238649	GCA_900020115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/115/GCA_900020115.1_11861_1_84	-	2842STDY5644021
Escherichia coli O26:NM str. 2010C-4788	1446735	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.52173	50.4	-	JHMS01	318	6118	5578	4/7/14	2/25/17	Scaffold	CDC	SAMN02352999	GCA_000617505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/505/GCA_000617505.2_Ec2010C-4788	25103754	2010C-4788
Escherichia coli O111:NM str. 2010C-4799	1446526	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.08379	50.3	-	JHMR01	174	5444	5005	4/7/14	2/25/17	Scaffold	CDC	SAMN02353000	GCA_000617525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/525/GCA_000617525.2_Ec2010C-4799	25103754	2010C-4799
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99345	39.8	-	FEDZ01	46	2182	1933	2/9/16	3/13/17	Scaffold	SC	SAMEA2238664	GCA_900020125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/125/GCA_900020125.1_11861_2_2	-	2842STDY5644037
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73668	52.1	-	CJJI01	43	4918	4566	3/21/15	2/27/17	Scaffold	SC	SAMEA1930171	GCA_001156265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/265/GCA_001156265.1_10592_2_42	-	E98-2601
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77838	32.7	-	FFYP01	57	2859	2711	2/10/16	3/5/17	Contig	SC	SAMEA1317319	GCA_900038325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/325/GCA_900038325.1_7414_7_55	-	st378
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80192	32.7	-	FFYO01	43	2891	2750	2/10/16	3/5/17	Contig	SC	SAMEA1317355	GCA_900038335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/335/GCA_900038335.1_7414_7_57	-	st397
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB4240	222606	Proteobacteria	Gammaproteobacteria	4.71567	52.1	-	CJDH01	49	4868	4514	3/21/15	2/27/17	Scaffold	SC	SAMEA2150668	GCA_001156285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/285/GCA_001156285.1_10541_1_68	-	ST3090/99
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99229	39.8	-	FCQB01	45	2194	1943	2/6/16	3/13/17	Scaffold	SC	SAMEA2238760	GCA_900020135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/135/GCA_900020135.1_11893_1_3	-	2842STDY5644134
Escherichia coli O111:NM str. 2010C-4818	1446527	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.14908	50.4	-	JHMQ01	216	5560	5103	4/7/14	2/25/17	Scaffold	CDC	SAMN02353001	GCA_000617545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/545/GCA_000617545.2_Ec2010C-4818	25103754	2010C-4818
Escherichia coli O121:H19 str. 2010C-4824	1446565	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.15287	50.4	-	JHMO01	190	5469	5038	4/7/14	2/23/17	Scaffold	CDC	SAMN02353003	GCA_000617565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/565/GCA_000617565.1_Ec2010C-4824	25103754	2010C-4824
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01564	39.6	-	FCQZ01	32	2208	1987	2/6/16	3/13/17	Scaffold	SC	SAMEA2238998	GCA_900020145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/145/GCA_900020145.1_11861_4_52	-	2842STDY5644374
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70907	52.1	-	CIYG01	54	4869	4512	3/21/15	2/27/17	Scaffold	SC	SAMEA2072933	GCA_001156325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/325/GCA_001156325.1_10349_1_81	-	H12ESR02737-001A
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8662	32.7	-	FFZD01	62	3002	2828	2/10/16	3/6/17	Contig	SC	SAMEA1464410	GCA_900038345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/345/GCA_900038345.1_7748_6_7	-	st438
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84158	32.7	-	FGAC01	54	2946	2791	2/10/16	3/5/17	Contig	SC	SAMEA1317569	GCA_900038355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/355/GCA_900038355.1_7414_8_20	-	st551
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82591	52	-	CJGT01	58	5025	4646	3/21/15	2/27/17	Scaffold	SC	SAMEA2148140	GCA_001156385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/385/GCA_001156385.1_10562_2_26	-	MDUST228
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04075	39.7	-	FCQY01	23	2274	2026	2/6/16	3/13/17	Scaffold	SC	SAMEA2239049	GCA_900020155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/155/GCA_900020155.1_11860_7_7	-	2842STDY5644428
Escherichia coli O121:H19 str. 2010C-4966	1446566	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.12947	50.4	-	JHML01	186	5448	5019	4/7/14	2/25/17	Scaffold	CDC	SAMN02353006	GCA_000617605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/605/GCA_000617605.2_Ec2010C-4966	25103754	2010C-4966
Escherichia coli O111:NM str. 2010C-4622	1446522	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.0584	50.4	-	JHMX01	197	5446	4997	4/7/14	2/25/17	Scaffold	CDC	SAMN02352994	GCA_000617625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/625/GCA_000617625.2_Ec2010C-4622	25103754	2010C-4622
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07647	39.6	-	FCQN01	36	2269	2029	2/6/16	3/13/17	Scaffold	SC	SAMEA2239012	GCA_900020165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/165/GCA_900020165.1_11861_4_66	-	2842STDY5644389
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72393	52	-	CJQJ01	44	4877	4527	3/21/15	2/27/17	Scaffold	SC	SAMEA1572850	GCA_001156465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/465/GCA_001156465.1_8490_6_49	-	MDUST49
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.89417	32.7	-	FGAD01	47	3028	2854	2/10/16	3/5/17	Contig	SC	SAMEA1317589	GCA_900038365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/365/GCA_900038365.1_7414_8_21	-	st554
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85623	32.7	-	FGAJ01	68	2989	2808	2/10/16	3/5/17	Contig	SC	SAMEA1317463	GCA_900038375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/375/GCA_900038375.1_7414_8_26	-	st565
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.78853	52.1	-	CJNW01	49	4961	4579	3/21/15	2/27/17	Scaffold	SC	SAMEA1406342	GCA_001156625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/625/GCA_001156625.1_7468_7_49	-	IB5335
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98953	39.8	-	FELX01	25	2194	1938	2/9/16	3/13/17	Scaffold	SC	SAMEA2383209	GCA_900020175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/175/GCA_900020175.1_12754_3_94	-	2842STDY5753755
Escherichia coli O121:H19 str. 06-3822	1446554	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.09591	50.5	-	JHNH01	194	5412	4997	4/7/14	2/25/17	Scaffold	CDC	SAMN02352911	GCA_000617645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/645/GCA_000617645.2_Ec06-3822	25103754	Jun-22
Escherichia coli O157:H7 str. 07-3091	1446611	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.28915	50.2	-	JHNF01	181	5649	5219	4/7/14	2/25/17	Scaffold	CDC	SAMN02352913	GCA_000617665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/665/GCA_000617665.2_Ec07-3091	25103754	Jul-91
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99308	39.8	-	FFRM01	49	2199	1940	2/9/16	6/9/17	Scaffold	SC	SAMEA2203792	GCA_900020245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/245/GCA_900020245.1_11679_1_11	-	2245STDY5608931
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73226	52.1	-	CJKA01	46	4924	4575	3/21/15	2/27/17	Scaffold	SC	SAMEA1930214	GCA_001156885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/156/885/GCA_001156885.1_10592_2_79	-	Jun-55
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.7845	32.7	-	FGAT01	58	2864	2719	2/10/16	8/21/17	Contig	SC	SAMEA1317573	GCA_900038385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/385/GCA_900038385.1_7414_8_39	-	st598
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81762	32.7	-	FGBO01	46	2915	2762	2/10/16	3/5/17	Contig	SC	SAMEA1464553	GCA_900038395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/395/GCA_900038395.1_7712_8_21	-	st686
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.80977	52	-	CJHK01	130	5005	4604	3/21/15	2/27/17	Scaffold	SC	SAMEA2147441	GCA_001157165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/165/GCA_001157165.1_10562_2_5	-	MDUST124
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.13189	39.6	-	FFTH01	58	2364	2106	2/10/16	3/13/17	Scaffold	SC	SAMEA2203848	GCA_900020255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/255/GCA_900020255.1_11657_4_24	-	2245STDY5608987
Escherichia coli O157:H7 str. 06-4039	1446610	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.27299	50.3	-	JHNG01	176	5646	5229	4/7/14	2/25/17	Scaffold	CDC	SAMN02352912	GCA_000617705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/705/GCA_000617705.2_Ec06-4039	25103754	Jun-39
Escherichia coli O157:H7 str. 07-3391	1446612	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.27586	50.3	-	JHNE01	178	5659	5204	4/7/14	2/25/17	Scaffold	CDC	SAMN02352914	GCA_000617725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/725/GCA_000617725.2_Ec07-3391	25103754	Jul-91
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12918	39.6	-	FDQZ01	67	2326	2074	2/9/16	3/13/17	Scaffold	SC	SAMEA2239169	GCA_900020555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/555/GCA_900020555.1_11860_8_36	-	2842STDY5644551
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82918	52	-	CJDQ01	55	5022	4642	3/21/15	2/27/17	Scaffold	SC	SAMEA2160519	GCA_001157305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/305/GCA_001157305.1_10541_2_18	-	MDUST213
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86709	32.7	-	FGBN01	67	3000	2830	2/10/16	3/5/17	Contig	SC	SAMEA1464577	GCA_900038405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/405/GCA_900038405.1_7712_8_24	-	st693
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84362	32.7	-	FGCY01	55	2950	2796	2/10/16	3/5/17	Contig	SC	SAMEA1464333	GCA_900038425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/425/GCA_900038425.1_7712_8_79	-	st837
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71972	52	-	CIYT01	46	4869	4512	3/21/15	2/27/17	Scaffold	SC	SAMEA2146630	GCA_001157565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/565/GCA_001157565.1_10425_1_9	-	np27
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98021	39.7	-	FDWV01	23	2181	1957	2/9/16	3/13/17	Scaffold	SC	SAMEA2238343	GCA_900020565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/565/GCA_900020565.1_12045_8_79	-	2842STDY5643712
Escherichia coli O145:NM str. 2010C-4557C2	1446597	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.30665	50.4	-	JHNA01	222	5629	5151	4/7/14	2/25/17	Scaffold	CDC	SAMN02352991	GCA_000617765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/765/GCA_000617765.2_Ec2010C-4557C2	25103754	2010C-4557C2
Escherichia coli O111:NM str. 2010C-4592	1446521	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.18555	50.4	-	JHMY01	203	5621	5149	4/7/14	2/25/17	Scaffold	CDC	SAMN02352993	GCA_000617805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/805/GCA_000617805.2_Ec2010C-4592	25103754	2010C-4592
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12764	39.5	-	FDXZ01	56	2369	2132	2/9/16	3/13/17	Scaffold	SC	SAMEA2238390	GCA_900020575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/575/GCA_900020575.1_11860_5_21	-	2842STDY5643760
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.91394	51.9	-	CJFU01	102	5109	4733	3/21/15	2/27/17	Scaffold	SC	SAMEA2163160	GCA_001157725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/725/GCA_001157725.1_10561_2_5	-	3332/3
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83057	32.7	-	FGDF01	56	2930	2780	2/10/16	3/5/17	Contig	SC	SAMEA1317402	GCA_900038435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/435/GCA_900038435.1_7414_7_22	-	st63
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80964	32.7	-	FGDI01	61	2902	2758	2/10/16	3/5/17	Contig	SC	SAMEA1317419	GCA_900038445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/445/GCA_900038445.1_7414_7_31	-	st77
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73092	52	-	CJJO01	44	4900	4537	3/21/15	2/27/17	Scaffold	SC	SAMEA1930188	GCA_001157865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/865/GCA_001157865.1_10592_2_54	-	E00-6657
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98589	39.8	-	FEBE01	51	2186	1917	2/9/16	3/13/17	Scaffold	SC	SAMEA2238533	GCA_900020585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/585/GCA_900020585.1_11860_6_67	-	2842STDY5643904
Escherichia coli O15:H18 str. K1516	1446601	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.35276	50.7	-	JHJE01	159	5628	5221	4/8/14	2/25/17	Scaffold	CDC	SAMN02353087	GCA_000617985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/985/GCA_000617985.2_EcK1516	25103754	K1516
Escherichia coli O157:H16 str. 98-3133	1446608	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	4.88846	50.4	-	JHJY01	114	5187	4830	4/8/14	2/25/17	Scaffold	CDC	SAMN02353067	GCA_000618005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/005/GCA_000618005.2_Ec98-3133	25103754	98-3133
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98727	39.7	-	FECZ01	32	2192	1933	2/9/16	3/15/17	Scaffold	SC	SAMEA2238610	GCA_900020595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/595/GCA_900020595.1_11861_1_48	-	2842STDY5643982
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.83134	51.9	-	CJXW01	68	5012	4652	3/21/15	2/27/17	Scaffold	SC	SAMEA1973123	GCA_001158005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/005/GCA_001158005.1_9953_5_49	-	A378
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.819	32.7	-	FGDK01	63	2915	2763	2/10/16	3/5/17	Contig	SC	SAMEA1317333	GCA_900038455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/455/GCA_900038455.1_7414_7_40	-	st93
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80033	32.7	-	FGEB01	57	2894	2750	2/10/16	3/5/17	Contig	SC	SAMEA1464561	GCA_900038465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/465/GCA_900038465.1_7554_6_70	-	st289
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.90927	51.9	-	CJLB01	51	5116	4749	3/21/15	2/27/17	Scaffold	SC	SAMEA1930227	GCA_001158025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/025/GCA_001158025.1_10593_2_57	-	08-10571
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1332	39.6	-	FEDL01	43	2361	2106	2/9/16	3/5/17	Scaffold	SC	SAMEA2238634	GCA_900020605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/605/GCA_900020605.1_11861_1_72	-	2842STDY5644006
Escherichia coli O157:H7 str. F6749	1446653	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.34306	50.3	-	JHJQ01	194	5741	5320	4/8/14	2/23/17	Scaffold	CDC	SAMN02353075	GCA_000618045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/045/GCA_000618045.1_EcF6749	25103754	F6749
Escherichia coli O157:H7 str. F7384	1446658	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.27459	50.3	-	JHJL01	182	5648	5213	4/8/14	2/25/17	Scaffold	CDC	SAMN02353080	GCA_000618065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/065/GCA_000618065.2_EcF7384	25103754	F7384
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98973	39.8	-	FEED01	47	2184	1925	2/9/16	3/13/17	Scaffold	SC	SAMEA2238672	GCA_900020615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/615/GCA_900020615.1_11861_2_11	-	2842STDY5644045
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9317	51.8	-	CJNB01	64	5110	4732	3/21/15	2/27/17	Scaffold	SC	SAMEA2154208	GCA_001158085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/085/GCA_001158085.1_10608_2_15	-	01-2010-005821
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83205	32.7	-	FGEA01	53	2930	2779	2/10/16	3/6/17	Contig	SC	SAMEA1464563	GCA_900038475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/475/GCA_900038475.1_7554_6_73	-	st301
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82233	32.7	-	FGEL01	60	2936	2783	2/10/16	3/5/17	Contig	SC	SAMEA1317465	GCA_900038485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/485/GCA_900038485.1_7414_7_68	-	st420
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73337	52	-	CJPV01	41	4897	4534	3/21/15	2/27/17	Scaffold	SC	SAMEA1572778	GCA_001158125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/125/GCA_001158125.1_8490_5_33	-	MDUST33
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.039	39.7	-	FEFL01	38	2236	2004	2/9/16	3/13/17	Scaffold	SC	SAMEA2238732	GCA_900020625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/625/GCA_900020625.1_11861_2_72	-	2842STDY5644105
Escherichia coli O6:H16 str. F5656C1	1446748	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	4.81527	50.4	-	JHJU01	180	5073	4666	4/8/14	2/23/17	Scaffold	CDC	SAMN02353071	GCA_000618085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/085/GCA_000618085.1_EcF5656C1	25103754	F5656C1
Escherichia coli O157:H7 str. F6142	1446652	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.35679	50.2	-	JHJT01	177	5747	5307	4/8/14	2/25/17	Scaffold	CDC	SAMN02353072	GCA_000618105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/105/GCA_000618105.2_EcF6142	25103754	F6142
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0142	39.8	-	FCPN01	34	2259	2001	2/6/16	3/13/17	Scaffold	SC	SAMEA2238752	GCA_900020635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/635/GCA_900020635.1_12273_1_87	-	2842STDY5644126
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.75501	52	-	CIXJ01	53	4919	4550	3/21/15	2/27/17	Scaffold	SC	SAMEA2072653	GCA_001158165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/165/GCA_001158165.1_10349_1_52	-	ERL101104
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81779	32.7	-	FGEN01	62	2910	2764	2/10/16	3/5/17	Contig	SC	SAMEA1317563	GCA_900038495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/495/GCA_900038495.1_7414_7_75	-	st432
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82691	32.7	-	FGEP01	61	2929	2774	2/10/16	3/5/17	Contig	SC	SAMEA1317552	GCA_900038505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/505/GCA_900038505.1_7414_7_83	-	st463
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.60148	52.2	-	CJIZ01	43	4758	4416	3/21/15	2/27/17	Scaffold	SC	SAMEA1929446	GCA_001158585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/585/GCA_001158585.1_10592_2_3	-	3657
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.97239	39.7	-	FEFU01	23	2175	1939	2/9/16	3/13/17	Scaffold	SC	SAMEA2238758	GCA_900020645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/645/GCA_900020645.1_11893_1_1	-	2842STDY5644132
Escherichia coli O157:H7 str. F7410	1446659	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.38727	50.2	-	JHJK01	216	5826	5367	4/8/14	2/25/17	Scaffold	CDC	SAMN02353081	GCA_000618145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/145/GCA_000618145.2_EcF7410	25103754	F7410
Escherichia coli O121:H19 str. F6714	1446499	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.13045	50.4	-	JHJR01	187	5467	5008	4/8/14	2/25/17	Scaffold	CDC	SAMN02353074	GCA_000618165.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/165/GCA_000618165.2_EcF6714	25103754	F6714
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99004	39.8	-	FCQR01	43	2190	1925	2/6/16	3/8/17	Scaffold	SC	SAMEA2239037	GCA_900020655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/655/GCA_900020655.1_11861_4_91	-	2842STDY5644416
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73845	52.1	-	CJHZ01	64	4938	4569	3/21/15	2/27/17	Scaffold	SC	SAMEA2148776	GCA_001158745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/745/GCA_001158745.1_10562_2_70	-	MDUST380
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83218	32.7	-	FGEU01	49	2923	2776	2/10/16	3/5/17	Contig	SC	SAMEA1317452	GCA_900038515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/515/GCA_900038515.1_7414_8_11	-	st525
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80369	32.7	-	FGHH01	38	2891	2749	2/10/16	3/5/17	Contig	SC	SAMEA1464363	GCA_900038525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/525/GCA_900038525.1_7521_5_1	-	st977
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73288	52	-	CJHQ01	61	4888	4547	3/21/15	2/27/17	Scaffold	SC	SAMEA2163069	GCA_001158805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/805/GCA_001158805.1_10562_2_55	-	MDUST357
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10352	39.6	-	FCQJ01	51	2299	2047	2/6/16	3/6/17	Scaffold	SC	SAMEA2239003	GCA_900020665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/665/GCA_900020665.1_11861_4_57	-	2842STDY5644379
Escherichia coli O157:H7 str. G5303	1446660	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.32878	50.3	-	JHJI01	173	5712	5276	4/8/14	2/23/17	Scaffold	CDC	SAMN02353083	GCA_000618185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/185/GCA_000618185.1_EcG5303	25103754	G5303
Escherichia coli O169:H41 str. F9792	1446702	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	4.92381	50.4	-	JHJJ01	112	5062	4736	4/8/14	2/25/17	Scaffold	CDC	SAMN02353082	GCA_000618205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/205/GCA_000618205.2_EcF9792	25103754	F9792
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00571	39.7	-	FCQP01	40	2241	1987	2/6/16	3/5/17	Scaffold	SC	SAMEA2239042	GCA_900020675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/675/GCA_900020675.1_11861_4_96	-	2842STDY5644421
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73222	52	-	CIWG01	42	4891	4538	3/21/15	2/27/17	Scaffold	SC	SAMEA2072677	GCA_001158905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/905/GCA_001158905.1_10349_1_15	-	ERL041419
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83362	32.7	-	FGHR01	45	2928	2782	2/10/16	3/5/17	Contig	SC	SAMEA1464443	GCA_900038535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/535/GCA_900038535.1_7521_5_15	-	st1004
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83921	32.7	-	FGIB01	60	2934	2785	2/10/16	3/5/17	Contig	SC	SAMEA1464582	GCA_900038545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/545/GCA_900038545.1_7521_5_30	-	st1045
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72403	52	-	CJFX01	63	4885	4514	3/21/15	2/27/17	Scaffold	SC	SAMEA2152102	GCA_001158985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/158/985/GCA_001158985.1_10561_2_53	-	np31
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99854	39.6	-	FCSB01	18	2192	1974	2/6/16	3/13/17	Scaffold	SC	SAMEA2239021	GCA_900020685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/685/GCA_900020685.1_11861_4_75	-	2842STDY5644399
Escherichia coli O157:H7 str. F7377	1446657	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.32811	50.2	-	JHJM01	212	5681	5252	4/8/14	2/25/17	Scaffold	CDC	SAMN02353079	GCA_000618225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/225/GCA_000618225.2_EcF7377	25103754	F7377
Escherichia coli O157:H7 str. H2495	1446661	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.33296	50.3	-	JHJH01	193	5715	5279	4/8/14	2/23/17	Scaffold	CDC	SAMN02353084	GCA_000618245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/245/GCA_000618245.1_EcH2495	25103754	H2495
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10123	39.6	-	FCSD01	46	2343	2079	2/6/16	3/13/17	Scaffold	SC	SAMEA2239070	GCA_900020695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/695/GCA_900020695.1_11860_7_29	-	2842STDY5644450
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73179	52	-	CJIC01	59	4891	4533	3/21/15	2/27/17	Scaffold	SC	SAMEA2153277	GCA_001159385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/385/GCA_001159385.1_10562_2_72	-	MDUST384
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86193	32.7	-	FGIO01	71	3002	2836	2/10/16	3/5/17	Contig	SC	SAMEA1464255	GCA_900038555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/555/GCA_900038555.1_7521_5_47	-	st1111
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81101	32.7	-	FGJG01	65	2908	2759	2/10/16	3/5/17	Contig	SC	SAMEA1469548	GCA_900038565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/565/GCA_900038565.1_7480_7_29	-	st1182
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.99927	52.1	-	CQGQ01	48	5192	4914	3/23/15	2/27/17	Scaffold	SC	SAMEA1568497	GCA_001159405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/405/GCA_001159405.1_8490_2_88	-	CH45
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15199	39.6	-	FCSH01	36	2379	2118	2/6/16	3/8/17	Scaffold	SC	SAMEA2239076	GCA_900020705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/705/GCA_900020705.1_11860_7_36	-	2842STDY5644457
Escherichia coli O157:H7 str. F6751	1446655	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.33553	50.3	-	JHJO01	191	5725	5300	4/8/14	2/25/17	Scaffold	CDC	SAMN02353077	GCA_000618265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/265/GCA_000618265.2_EcF6751	25103754	F6751
Escherichia coli O157:H7 str. H2498	1446662	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.28897	50.3	-	JHJG01	190	5651	5246	4/8/14	2/25/17	Scaffold	CDC	SAMN02353085	GCA_000618285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/285/GCA_000618285.2_EcH2498	25103754	H2498
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99022	39.8	-	FCTD01	49	2188	1931	2/6/16	3/13/17	Scaffold	SC	SAMEA2239107	GCA_900020715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/715/GCA_900020715.1_11860_7_68	-	2842STDY5644488
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.68188	52.1	-	CIWP01	44	4832	4477	3/21/15	2/27/17	Scaffold	SC	SAMEA2072804	GCA_001159525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/525/GCA_001159525.1_10349_1_27	-	ERL0661
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78505	32.7	-	FGJH01	71	2867	2723	2/10/16	3/5/17	Contig	SC	SAMEA1469551	GCA_900038575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/575/GCA_900038575.1_7480_7_30	-	st1185
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81204	32.7	-	FGJI01	25	2917	2786	2/10/16	3/6/17	Contig	SC	SAMEA1469669	GCA_900038585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/585/GCA_900038585.1_7480_7_32	-	st1193
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93227	51.8	-	CJUJ01	54	5131	4746	3/21/15	2/27/17	Scaffold	SC	SAMEA2056498	GCA_001159545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/545/GCA_001159545.1_9870_8_14	-	2009-004002
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0055	39.8	-	FCTC01	17	2238	1995	2/6/16	3/13/17	Scaffold	SC	SAMEA2239105	GCA_900020725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/725/GCA_900020725.1_11860_7_66	-	2842STDY5644486
Escherichia coli O157:H7 str. F6750	1446654	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.4109	50.3	-	JHJP01	189	5845	5412	4/8/14	2/25/17	Scaffold	CDC	SAMN02353076	GCA_000618305.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/305/GCA_000618305.2_EcF6750	25103754	F6750
Escherichia coli O25:NM str. E2539C1	1446708	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.01302	50.6	-	JHJV01	175	5327	4924	4/8/14	2/25/17	Scaffold	CDC	SAMN02353070	GCA_000618405.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/405/GCA_000618405.2_EcE2539C1	25103754	E2539C1
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05399	39.6	-	FCTE01	24	2265	2040	2/6/16	3/13/17	Scaffold	SC	SAMEA2238784	GCA_900020735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/735/GCA_900020735.1_11893_1_27	-	2842STDY5644158
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB1252	205706	Proteobacteria	Gammaproteobacteria	4.85358	52	-	CJSC01	48	5054	4679	3/21/15	2/27/17	Scaffold	SC	SAMEA1903756	GCA_001159605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/605/GCA_001159605.1_9475_4_53	-	C3634
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79973	32.7	-	FFWM01	50	2889	2748	2/10/16	3/5/17	Contig	SC	SAMEA1464422	GCA_900038715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/715/GCA_900038715.1_7554_6_26	-	st170
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8175	32.7	-	FFYQ01	55	2911	2763	2/10/16	3/5/17	Contig	SC	SAMEA1317344	GCA_900038725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/725/GCA_900038725.1_7414_7_58	-	st399
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2770	204451	Proteobacteria	Gammaproteobacteria	4.72444	52	-	CJRT01	39	4883	4526	3/21/15	2/27/17	Scaffold	SC	SAMEA1687854	GCA_001159985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/985/GCA_001159985.1_8616_4_46	-	BCR162
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05992	39.5	-	FCTH01	34	2281	2043	2/6/16	3/13/17	Scaffold	SC	SAMEA2238787	GCA_900020745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/745/GCA_900020745.1_11893_1_30	-	2842STDY5644161
Escherichia coli O121:H19 str. K5198	1446575	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.12865	50.4	-	JHIK01	198	5433	5005	4/8/14	2/25/17	Scaffold	CDC	SAMN02353107	GCA_000618705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/705/GCA_000618705.2_EcK5198	25103754	K5198
Escherichia coli O121:H19 str. K5269	1446576	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.13063	50.4	-	JHIJ01	187	5440	5012	4/8/14	2/25/17	Scaffold	CDC	SAMN02353108	GCA_000618725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/725/GCA_000618725.2_EcK5269	25103754	K5269
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09237	39.5	-	FCTJ01	38	2309	2074	2/6/16	3/13/17	Scaffold	SC	SAMEA2382552	GCA_900020755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/755/GCA_900020755.1_12673_6_7	-	2842STDY5753092
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73807	52	-	CJBY01	59	4898	4557	3/21/15	2/27/17	Scaffold	SC	SAMEA2145038	GCA_001160065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/065/GCA_001160065.1_10493_1_42	-	MDUST222
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83977	32.7	-	FFYS01	46	2975	2803	2/10/16	3/6/17	Contig	SC	SAMEA1317504	GCA_900038735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/735/GCA_900038735.1_7414_7_63	-	st408
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82366	32.7	-	FFYX01	57	2923	2778	2/10/16	3/5/17	Contig	SC	SAMEA1317445	GCA_900038745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/745/GCA_900038745.1_7414_7_70	-	st425
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.83158	52	-	CJBQ01	54	5019	4620	3/21/15	2/27/17	Scaffold	SC	SAMEA2150673	GCA_001160125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/125/GCA_001160125.1_10493_1_30	-	MDUST183
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0508	39.6	-	FCTZ01	23	2261	2015	2/6/16	3/12/17	Scaffold	SC	SAMEA2238820	GCA_900020765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/765/GCA_900020765.1_11893_1_62	-	2842STDY5644194
Escherichia coli O39:NM str. F8704-2	1446739	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.28644	50.4	-	JHHJ01	235	5726	5255	4/8/14	2/25/17	Scaffold	CDC	SAMN02353134	GCA_000618905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/905/GCA_000618905.2_EcF8704-2	25103754	F8704-2
Escherichia coli O157:H7 str. K7140	1446697	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.27421	50.2	-	JHHK01	182	5626	5204	4/8/14	2/25/17	Scaffold	CDC	SAMN02353133	GCA_000618925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/925/GCA_000618925.2_EcK7140	25103754	K7140
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04793	39.5	-	FCUB01	44	2272	2017	2/6/16	3/8/17	Scaffold	SC	SAMEA2238825	GCA_900020775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/775/GCA_900020775.1_11822_8_52	-	2842STDY5644199
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7174	52	-	CJOT01	78	4893	4522	3/21/15	2/27/17	Scaffold	SC	SAMEA1572809	GCA_001160145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/145/GCA_001160145.1_8447_8_23	-	MDUST95
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.7996	32.7	-	FFZF01	65	2893	2742	2/10/16	3/5/17	Contig	SC	SAMEA1317363	GCA_900038755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/755/GCA_900038755.1_7414_7_78	-	st443
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83673	32.7	-	FFZX01	44	2971	2839	2/10/16	3/5/17	Contig	SC	SAMEA1317575	GCA_900038765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/765/GCA_900038765.1_7414_8_12	-	st527
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72387	52	-	CJPD01	40	4886	4531	3/21/15	2/27/17	Scaffold	SC	SAMEA1572828	GCA_001160285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/285/GCA_001160285.1_8447_8_6	-	MDUST78
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99176	39.8	-	FCVF01	50	2193	1935	2/6/16	3/8/17	Scaffold	SC	SAMEA2382559	GCA_900020785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/785/GCA_900020785.1_12673_6_14	-	2842STDY5753099
Escherichia coli O157:H7 str. 2011EL-2290	1446649	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.34289	50.1	-	JHKC01	197	5745	5312	4/8/14	2/25/17	Scaffold	CDC	SAMN02353063	GCA_000618945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/945/GCA_000618945.2_Ec2011EL-2290	25103754	2011EL-2290
Escherichia coli O157:H7 str. 2011EL-2313	1446651	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.34928	50.2	-	JHKA01	210	5752	5294	4/8/14	2/25/17	Scaffold	CDC	SAMN02353065	GCA_000618985.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/618/985/GCA_000618985.2_Ec2011EL-2313	25103754	2011EL-2313
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00068	39.6	-	FCVQ01	23	2191	1987	2/6/16	3/13/17	Scaffold	SC	SAMEA2382560	GCA_900020795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/795/GCA_900020795.1_12673_6_15	-	2842STDY5753100
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.75337	52	-	CIWX01	54	4910	4551	3/21/15	2/27/17	Scaffold	SC	SAMEA2072649	GCA_001160385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/385/GCA_001160385.1_10349_1_40	-	ERL08619
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81831	32.7	-	FGAI01	48	2940	2757	2/10/16	3/6/17	Contig	SC	SAMEA1317520	GCA_900038785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/785/GCA_900038785.1_7414_8_25	-	st564
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.94624	32.7	-	FGAM01	80	3101	2912	2/10/16	3/5/17	Contig	SC	SAMEA1317332	GCA_900038795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/795/GCA_900038795.1_7414_8_31	-	st574
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72152	52	-	CJBM01	55	4873	4511	3/21/15	2/27/17	Scaffold	SC	SAMEA2154519	GCA_001160585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/585/GCA_001160585.1_10493_1_20	-	MDUST157
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00402	39.7	-	FCVS01	42	2219	1996	2/6/16	3/13/17	Scaffold	SC	SAMEA2238888	GCA_900020805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/805/GCA_900020805.1_11861_3_35	-	2842STDY5644263
Escherichia coli O111:NM str. 2009C-4052	1446517	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.29546	50.2	-	JHGS01	205	5742	5265	4/8/14	2/25/17	Scaffold	CDC	SAMN02352942	GCA_000619005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/005/GCA_000619005.2_Ec2009C-4052	25103754	2009C-4052
Escherichia coli O157:H7 str. 2009C-4258	1446617	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.36463	50.2	-	JHGQ01	221	5803	5327	4/8/14	2/25/17	Scaffold	CDC	SAMN02352944	GCA_000619045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/045/GCA_000619045.2_Ec2009C-4258	25103754	2009C-4258
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05811	39.7	-	FCVZ01	29	2265	2038	2/6/16	3/12/17	Scaffold	SC	SAMEA2238904	GCA_900020815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/815/GCA_900020815.1_11861_3_52	-	2842STDY5644279
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72854	52	-	CJQI01	44	4888	4533	3/21/15	2/27/17	Scaffold	SC	SAMEA1572867	GCA_001160665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/665/GCA_001160665.1_8490_6_50	-	MDUST50
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.91207	32.7	-	FGCZ01	53	3072	2878	2/10/16	3/5/17	Contig	SC	SAMEA1464645	GCA_900038805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/805/GCA_900038805.1_7712_8_72	-	st823
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80059	32.7	-	FGDC01	45	2903	2733	2/10/16	3/5/17	Contig	SC	SAMEA1317468	GCA_900038815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/815/GCA_900038815.1_7414_7_10	-	st36
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72093	52	-	CJEF01	57	4884	4519	3/21/15	2/27/17	Scaffold	SC	SAMEA2148021	GCA_001160945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/160/945/GCA_001160945.1_10541_2_39	-	MDUST317
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07602	39.6	-	FCZD01	32	2265	2016	2/6/16	3/8/17	Scaffold	SC	SAMEA2674625	GCA_900020825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/825/GCA_900020825.1_14412_3_3	-	2842STDY5881885
Escherichia coli O91:H21 str. 2009C-4646	1446766	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.02777	50.8	-	JHGO01	156	5289	4925	4/8/14	2/25/17	Scaffold	CDC	SAMN02352946	GCA_000619065.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/065/GCA_000619065.2_Ec2009C-4646	25103754	2009C-4646
Escherichia coli O121:H19 str. 2009C-4750	1446557	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.12842	50.5	-	JHGL01	193	5440	5004	4/8/14	2/25/17	Scaffold	CDC	SAMN02352949	GCA_000619085.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/085/GCA_000619085.2_Ec2009C-4750	25103754	2009C-4750
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.9919	39.7	-	FCZN01	31	2203	1946	2/6/16	3/13/17	Scaffold	SC	SAMEA2674663	GCA_900020835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/835/GCA_900020835.1_14412_3_41	-	2842STDY5881924
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72442	52	-	CJQM01	39	4886	4530	3/21/15	2/27/17	Scaffold	SC	SAMEA1572836	GCA_001161385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/385/GCA_001161385.1_8490_6_53	-	MDUST53
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80047	32.7	-	FGDO01	59	2898	2745	2/10/16	3/5/17	Contig	SC	SAMEA1464252	GCA_900038825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/825/GCA_900038825.1_7554_6_18	-	st145
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82807	32.7	-	FGDW01	56	2928	2779	2/10/16	3/5/17	Contig	SC	SAMEA1464449	GCA_900038835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/835/GCA_900038835.1_7554_6_54	-	st236
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.78034	52.1	-	CJBG01	63	4964	4596	3/21/15	2/27/17	Scaffold	SC	SAMEA2158564	GCA_001161505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/505/GCA_001161505.1_10493_1_13	-	MDUST136
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07558	39.6	-	FDAJ01	48	2268	2022	2/6/16	3/13/17	Scaffold	SC	SAMEA2382620	GCA_900020845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/845/GCA_900020845.1_12673_6_75	-	2842STDY5753160
Escherichia coli O121:H19 str. 2009EL1302	1446558	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.16689	50.4	-	JHGH01	202	5490	5060	4/8/14	2/25/17	Scaffold	CDC	SAMN02352953	GCA_000619125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/125/GCA_000619125.2_Ec2009EL1302	25103754	2009EL1302
Escherichia coli O121:H19 str. 2010C-3794	1446561	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.11155	50.4	-	JHFL01	195	5423	4993	4/8/14	2/25/17	Scaffold	CDC	SAMN02352976	GCA_000619205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/205/GCA_000619205.2_Ec2010C-3794	25103754	2010C-3794
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1259	39.5	-	FDDF01	40	2355	2120	2/6/16	3/12/17	Scaffold	SC	SAMEA2382694	GCA_900020855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/855/GCA_900020855.1_12673_7_54	-	2842STDY5753235
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.83053	52	-	CIYZ01	52	5023	4645	3/21/15	2/27/17	Scaffold	SC	SAMEA2144597	GCA_001161525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/525/GCA_001161525.1_10492_1_17	-	MDUST158
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86532	32.7	-	FGDX01	41	3002	2827	2/10/16	3/5/17	Contig	SC	SAMEA1464445	GCA_900038845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/845/GCA_900038845.1_7554_6_57	-	st247
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.94516	32.7	-	FGDY01	58	3101	2916	2/10/16	3/5/17	Contig	SC	SAMEA1464462	GCA_900038855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/855/GCA_900038855.1_7554_6_63	-	st264
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2770	204451	Proteobacteria	Gammaproteobacteria	4.76264	52	-	CJRQ01	48	4917	4559	3/21/15	2/27/17	Scaffold	SC	SAMEA1687844	GCA_001161545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/545/GCA_001161545.1_8616_4_42	-	BCR89
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07357	39.6	-	FDDI01	27	2287	2033	2/6/16	3/13/17	Scaffold	SC	SAMEA2382697	GCA_900020865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/865/GCA_900020865.1_12673_7_57	-	2842STDY5753238
Escherichia coli O111:NM str. 2009C-4006	1446516	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.16476	50.4	-	JHGU01	198	5576	5098	4/8/14	2/25/17	Scaffold	CDC	SAMN02352940	GCA_000619225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/225/GCA_000619225.2_Ec2009C-4006	25103754	2009C-4006
Escherichia coli O45:H2 str. 2009C-3686	1446741	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.29474	50.5	-	JHGY01	203	5738	5291	4/8/14	2/25/17	Scaffold	CDC	SAMN02352935	GCA_000619265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/265/GCA_000619265.2_Ec2009C-3686	25103754	2009C-3686
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01521	39.7	-	FDEN01	20	2243	2008	2/6/16	3/15/17	Scaffold	SC	SAMEA2382729	GCA_900020875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/875/GCA_900020875.1_12673_7_89	-	2842STDY5753270
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.85154	52	-	CIZC01	62	5043	4675	3/21/15	2/27/17	Scaffold	SC	SAMEA2152772	GCA_001161765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/765/GCA_001161765.1_10492_1_21	-	MDUST182
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86536	32.7	-	FGEK01	48	2996	2818	2/10/16	3/5/17	Contig	SC	SAMEA1317516	GCA_900038865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/865/GCA_900038865.1_7414_7_65	-	st411
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81301	32.7	-	FGEO01	58	2907	2757	2/10/16	3/6/17	Contig	SC	SAMEA1317535	GCA_900038875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/875/GCA_900038875.1_7414_7_80	-	st454
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.93407	52.1	-	CQGZ01	46	5101	4834	3/23/15	2/27/17	Scaffold	SC	SAMEA1568522	GCA_001161925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/925/GCA_001161925.1_8490_2_65	-	CH22
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11336	39.6	-	FDFO01	42	2362	2098	2/6/16	3/6/17	Scaffold	SC	SAMEA2382756	GCA_900020885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/885/GCA_900020885.1_12718_4_21	-	2842STDY5753298
Escherichia coli O69:H11 str. 2009C-3601	1446754	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.42933	50.3	-	JHHA01	269	5939	5445	4/8/14	2/25/17	Scaffold	CDC	SAMN02352933	GCA_000619285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/285/GCA_000619285.2_Ec2009C-3601	25103754	2009C-3601
Escherichia coli O123:H11 str. 2009C-3307	1446580	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.70724	50.3	-	JHHB01	331	6309	5782	4/8/14	2/25/17	Scaffold	CDC	SAMN02352932	GCA_000619325.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/325/GCA_000619325.2_Ec2009C-3307	25103754	2009C-3307
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13394	39.6	-	FDGS01	46	2378	2124	2/6/16	3/6/17	Scaffold	SC	SAMEA2382786	GCA_900020895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/895/GCA_900020895.1_12718_4_51	-	2842STDY5753328
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB1252	205706	Proteobacteria	Gammaproteobacteria	4.72855	52	-	CJRY01	43	4888	4523	3/21/15	2/27/17	Scaffold	SC	SAMEA1903750	GCA_001162325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/325/GCA_001162325.1_9475_4_48	-	D7558
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81915	32.7	-	FGES01	55	2912	2760	2/10/16	3/5/17	Contig	SC	SAMEA1317401	GCA_900038885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/885/GCA_900038885.1_7414_8_4	-	st506
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85385	32.7	-	FGFZ01	29	2977	2855	2/10/16	3/5/17	Contig	SC	SAMEA1464464	GCA_900038895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/895/GCA_900038895.1_7712_8_87	-	st852
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71968	52	-	CIWZ01	54	4878	4515	3/21/15	2/27/17	Scaffold	SC	SAMEA2072805	GCA_001162345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/345/GCA_001162345.1_10349_1_30	-	ERL072830
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98429	39.8	-	FDHE01	46	2182	1936	2/6/16	3/13/17	Scaffold	SC	SAMEA2382798	GCA_900020905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/905/GCA_900020905.1_12718_4_63	-	2842STDY5753340
Escherichia coli O111:NM str. K6722	1446533	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.34524	50.2	-	JHHU01	215	5836	5356	4/8/14	2/25/17	Scaffold	CDC	SAMN02353123	GCA_000619465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/465/GCA_000619465.2_EcK6722	25103754	K6722
Escherichia coli O111:NM str. K6895	1446537	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.15203	50.4	-	JHHQ01	216	5571	5109	4/8/14	2/25/17	Scaffold	CDC	SAMN02353127	GCA_000619545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/545/GCA_000619545.2_EcK6895	25103754	K6895
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0787	39.7	-	FDIC01	31	2313	2065	2/6/16	3/12/17	Scaffold	SC	SAMEA2382822	GCA_900020915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/915/GCA_900020915.1_12718_4_87	-	2842STDY5753364
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69552	52.1	-	CJET01	55	4852	4504	3/21/15	2/27/17	Scaffold	SC	SAMEA2159341	GCA_001162745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/745/GCA_001162745.1_10541_2_6	-	MDUST160
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79376	32.7	-	FGGE01	66	2895	2745	2/10/16	3/5/17	Contig	SC	SAMEA1317383	GCA_900038915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/915/GCA_900038915.1_7414_8_54	-	st882
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87139	32.7	-	FGGI01	136	2978	2811	2/10/16	3/5/17	Contig	SC	SAMEA1317375	GCA_900038925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/925/GCA_900038925.1_7414_8_56	-	st888
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72352	52	-	CJGH01	55	4893	4512	3/21/15	2/27/17	Scaffold	SC	SAMEA2148985	GCA_001162845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/162/845/GCA_001162845.1_10561_2_66	-	ERL101102
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06101	39.5	-	FDID01	37	2269	2040	2/6/16	3/13/17	Scaffold	SC	SAMEA2382823	GCA_900020925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/925/GCA_900020925.1_12718_4_88	-	2842STDY5753365
Escherichia coli O111:NM str. K6897	1446538	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.29216	50.2	-	JHHP01	203	5745	5275	4/8/14	2/25/17	Scaffold	CDC	SAMN02353128	GCA_000619565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/565/GCA_000619565.2_EcK6897	25103754	K6897
Escherichia coli O111:NM str. K6898	1446539	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.28843	50.2	-	JHHO01	200	5743	5287	4/8/14	2/25/17	Scaffold	CDC	SAMN02353129	GCA_000619585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/585/GCA_000619585.2_EcK6898	25103754	K6898
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09068	39.5	-	FDIE01	43	2315	2079	2/6/16	3/13/17	Scaffold	SC	SAMEA2382824	GCA_900020935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/935/GCA_900020935.1_12718_4_89	-	2842STDY5753366
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71913	52	-	CJQA01	44	4874	4526	3/21/15	2/27/17	Scaffold	SC	SAMEA1572804	GCA_001163005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/005/GCA_001163005.1_8490_5_6	-	MDUST6
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78114	32.7	-	FGHC01	74	2870	2720	2/10/16	3/5/17	Contig	SC	SAMEA1317528	GCA_900038935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/935/GCA_900038935.1_7414_8_87	-	st961
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80283	32.7	-	FGHM01	49	2891	2742	2/10/16	3/5/17	Contig	SC	SAMEA1464294	GCA_900038945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/945/GCA_900038945.1_7521_5_10	-	st998
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71927	52	-	CIXG01	53	4883	4517	3/21/15	2/27/17	Scaffold	SC	SAMEA2072807	GCA_001163665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/665/GCA_001163665.1_10349_1_36	-	ERL082444
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.14332	39.6	-	FDMF01	78	2379	2134	2/6/16	3/13/17	Scaffold	SC	SAMEA2382938	GCA_900020945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/945/GCA_900020945.1_12754_1_13	-	2842STDY5753482
Escherichia coli O111:NM str. K6904	1446540	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.24282	50.3	-	JHHN01	207	5688	5224	4/8/14	2/23/17	Scaffold	CDC	SAMN02353130	GCA_000619625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/625/GCA_000619625.1_EcK6904	25103754	K6904
Escherichia coli O111:NM str. K6915	1446542	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.28058	50.2	-	JHHL01	192	5730	5261	4/8/14	2/25/17	Scaffold	CDC	SAMN02353132	GCA_000619645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/645/GCA_000619645.2_EcK6915	25103754	K6915
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15357	39.6	-	FDMH01	33	2387	2133	2/6/16	3/13/17	Scaffold	SC	SAMEA2382940	GCA_900020955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/955/GCA_900020955.1_12754_1_15	-	2842STDY5753484
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74678	52.1	-	CJTO01	48	4913	4542	3/21/15	2/27/17	Scaffold	SC	SAMEA1903886	GCA_001163925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/925/GCA_001163925.1_9475_6_59	-	1019833
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.90426	32.6	-	FGIH01	51	3041	2863	2/10/16	3/6/17	Contig	SC	SAMEA1464640	GCA_900038955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/955/GCA_900038955.1_7521_5_38	-	st1072
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.74958	32.7	-	FGIJ01	34	2808	2665	2/10/16	3/5/17	Contig	SC	SAMEA1464293	GCA_900038965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/965/GCA_900038965.1_7521_5_43	-	st1097
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72206	52	-	CJHI01	53	4891	4516	3/21/15	2/27/17	Scaffold	SC	SAMEA2157064	GCA_001163985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/985/GCA_001163985.1_10562_2_38	-	MDUST264
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07991	39.6	-	FDPI01	32	2240	2020	2/9/16	3/13/17	Scaffold	SC	SAMEA2383024	GCA_900020965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/965/GCA_900020965.1_12754_2_4	-	2842STDY5753569
Escherichia coli O157:H7 str. 08-4529	1446616	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.33552	50.2	-	JHHI01	208	5754	5301	4/8/14	2/23/17	Scaffold	CDC	SAMN02352925	GCA_000619665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/665/GCA_000619665.1_Ec08-4529	25103754	Aug-29
Escherichia coli O157:NM str. 08-4540	1446698	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.36836	50.2	-	JHHH01	209	5781	5313	4/8/14	2/25/17	Scaffold	CDC	SAMN02352926	GCA_000619685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/685/GCA_000619685.2_Ec08-4540	25103754	Aug-40
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0506	39.6	-	FDQB01	30	2250	2013	2/9/16	3/12/17	Scaffold	SC	SAMEA2383043	GCA_900020975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/975/GCA_900020975.1_12754_2_23	-	2842STDY5753588
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	5.15649	52	-	CQHB01	66	5395	5108	3/23/15	2/27/17	Scaffold	SC	SAMEA1568539	GCA_001164125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/125/GCA_001164125.1_8490_2_52	-	CH9
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.76837	32.7	-	FGIZ01	50	2859	2717	2/10/16	3/5/17	Contig	SC	SAMEA1469633	GCA_900038975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/975/GCA_900038975.1_7480_7_21	-	st1156
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78563	32.7	-	FGJF01	59	2876	2728	2/10/16	3/5/17	Contig	SC	SAMEA1469543	GCA_900038985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/985/GCA_900038985.1_7480_7_27	-	st1177
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72091	52	-	CEXP01	54	4895	4525	3/11/15	2/27/17	Scaffold	SC	SAMEA2145338	GCA_001164165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/165/GCA_001164165.1_10541_2_41	-	MDUST320
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10386	39.5	-	FDQM01	65	2339	2082	2/9/16	3/5/17	Scaffold	SC	SAMEA2383054	GCA_900020985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/985/GCA_900020985.1_12754_2_34	-	2842STDY5753599
Escherichia coli O69:H11 str. 08-4661	1446753	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.52116	50.3	-	JHHG01	299	6060	5547	4/8/14	2/25/17	Scaffold	CDC	SAMN02352927	GCA_000619705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/705/GCA_000619705.2_Ec08-4661	25103754	Aug-61
Escherichia coli O121:H19 str. 2009C-4050	1446555	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.20099	50.4	-	JHGT01	196	5546	5116	4/8/14	2/25/17	Scaffold	CDC	SAMN02352941	GCA_000619745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/745/GCA_000619745.2_Ec2009C-4050	25103754	2009C-4050
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04381	39.6	-	FEGF01	33	2221	1990	2/9/16	3/13/17	Scaffold	SC	SAMEA2383061	GCA_900020995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/995/GCA_900020995.1_12754_2_41	-	2842STDY5753606
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.80936	52	-	CIZI01	58	4968	4587	3/21/15	2/27/17	Scaffold	SC	SAMEA2145564	GCA_001164345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/345/GCA_001164345.1_10492_1_24	-	MDUST196
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79675	32.7	-	FGJZ01	59	2893	2746	2/10/16	3/5/17	Contig	SC	SAMEA1469696	GCA_900038995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/995/GCA_900038995.1_7480_7_59	-	st1272
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79555	32.7	-	FGKI01	64	2891	2748	2/10/16	3/5/17	Contig	SC	SAMEA1469569	GCA_900039005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/005/GCA_900039005.1_7480_7_74	-	st1300
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72093	52.1	-	CJQW01	39	4883	4525	3/21/15	2/27/17	Scaffold	SC	SAMEA1572770	GCA_001164605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/605/GCA_001164605.1_8490_6_68	-	MDUST68
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04919	39.6	-	FEGQ01	15	2259	2031	2/9/16	3/15/17	Scaffold	SC	SAMEA2383072	GCA_900021005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/005/GCA_900021005.1_12754_2_52	-	2842STDY5753617
Escherichia coli O103:H2 str. 2009C-3279	1446503	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.2329	50.5	-	JHHE01	190	5635	5222	4/8/14	2/25/17	Scaffold	CDC	SAMN02352929	GCA_000619765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/619/765/GCA_000619765.2_Ec2009C-3279	25103754	2009C-3279
Escherichia coli O26:H11 str. 03-3500	1446710	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.36118	50.3	-	JHNT01	273	5845	5352	4/9/14	2/25/17	Scaffold	CDC	SAMN02352899	GCA_000622445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/445/GCA_000622445.2_Ec03-3500	25103754	Mar-00
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99191	39.8	-	FEHC01	51	2183	1927	2/9/16	3/13/17	Scaffold	SC	SAMEA2383084	GCA_900021015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/015/GCA_900021015.1_12754_2_64	-	2842STDY5753629
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.9746	52.1	-	CQHR01	54	5154	4874	3/22/15	2/28/17	Scaffold	SC	SAMEA1568553	GCA_001164765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/164/765/GCA_001164765.1_8490_2_92	-	CH49
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80346	32.7	-	FGKN01	74	2897	2753	2/10/16	8/21/17	Contig	SC	SAMEA1469693	GCA_900039025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/025/GCA_900039025.1_7480_7_81	-	st1317
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86702	32.7	-	FGKQ01	76	2991	2838	2/10/16	3/5/17	Contig	SC	SAMEA1469656	GCA_900039035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/035/GCA_900039035.1_7480_7_85	-	st1323
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.88837	52	-	CJGQ01	78	5115	4714	3/21/15	2/27/17	Scaffold	SC	SAMEA2162368	GCA_001165145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/145/GCA_001165145.1_10562_2_24	-	MDUST221
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15415	39.6	-	FEHE01	50	2385	2142	2/9/16	3/13/17	Scaffold	SC	SAMEA2383086	GCA_900021025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/025/GCA_900021025.1_12754_2_66	-	2842STDY5753631
Escherichia coli O26:H11 str. 06-3464	1446711	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.34798	50.3	-	JHNO01	265	5843	5349	4/9/14	2/25/17	Scaffold	CDC	SAMN02352904	GCA_000622465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/465/GCA_000622465.2_Ec06-3464	25103754	Jun-64
Escherichia coli O26:H11 str. 2010C-4819	1446724	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.41623	50.3	-	JHMP01	274	5909	5426	4/9/14	2/25/17	Scaffold	CDC	SAMN02353002	GCA_000622485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/485/GCA_000622485.2_Ec2010C-4819	25103754	2010C-4819
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0424	39.5	-	FEHF01	33	2259	2007	2/9/16	3/13/17	Scaffold	SC	SAMEA2383087	GCA_900021035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/035/GCA_900021035.1_12754_2_67	-	2842STDY5753632
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72392	52	-	CJOP01	42	4883	4524	3/21/15	2/27/17	Scaffold	SC	SAMEA1572768	GCA_001165625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/625/GCA_001165625.1_8447_8_10	-	MDUST82
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81736	32.7	-	FGKV01	57	2925	2775	2/10/16	3/5/17	Contig	SC	SAMEA1469560	GCA_900039045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/045/GCA_900039045.1_7480_7_90	-	st1336
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.75965	32.7	-	FGLE01	33	2819	2681	2/10/16	3/5/17	Contig	SC	SAMEA1464291	GCA_900039055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/055/GCA_900039055.1_7521_5_56	-	st1378
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69853	52.1	-	CJYR01	47	4852	4502	3/21/15	2/27/17	Scaffold	SC	SAMEA2059368	GCA_001165665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/665/GCA_001165665.1_9953_5_73	-	LNT1378
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98259	39.7	-	FEKQ01	17	2205	1963	2/9/16	3/13/17	Scaffold	SC	SAMEA2383176	GCA_900021045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/045/GCA_900021045.1_12754_3_61	-	2842STDY5753722
Escherichia coli O26:H11 str. 2010C-4430	1446723	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.34556	50.4	-	JHND01	239	5831	5354	4/9/14	2/25/17	Scaffold	CDC	SAMN02352988	GCA_000622505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/505/GCA_000622505.2_Ec2010C-4430	25103754	2010C-4430
Escherichia coli O26:H11 str. 2010C-5028	1446726	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.57213	50.3	-	JHMI01	270	6161	5636	4/9/14	2/25/17	Scaffold	CDC	SAMN02353009	GCA_000622535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/535/GCA_000622535.2_Ec2010C-5028	25103754	2010C-5028
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98974	39.8	-	FELO01	46	2190	1930	2/9/16	3/6/17	Scaffold	SC	SAMEA2383200	GCA_900021055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/055/GCA_900021055.1_12754_3_85	-	2842STDY5753746
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74282	52.1	-	CJZC01	50	4921	4567	3/21/15	2/27/17	Scaffold	SC	SAMEA2057374	GCA_001166125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/125/GCA_001166125.1_9953_5_89	-	LNT666
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82637	32.7	-	FGLX01	58	2929	2778	2/10/16	3/5/17	Contig	SC	SAMEA1464376	GCA_900039065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/065/GCA_900039065.1_7521_5_84	-	st1450
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.91173	32.6	-	FGMA01	63	3051	2853	2/10/16	3/5/17	Contig	SC	SAMEA1464489	GCA_900039075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/075/GCA_900039075.1_7521_5_87	-	st1455
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72208	52	-	CJDT01	54	4879	4513	3/21/15	2/27/17	Scaffold	SC	SAMEA2159126	GCA_001166545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/545/GCA_001166545.1_10541_2_20	-	MDUST224
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11812	39.6	-	FELZ01	57	2338	2084	2/9/16	3/15/17	Scaffold	SC	SAMEA2383211	GCA_900021065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/065/GCA_900021065.1_12754_4_1	-	2842STDY5753758
Escherichia coli O26:H11 str. 2010EL-1699	1446727	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.38966	50.3	-	JHMF01	262	5884	5398	4/9/14	2/23/17	Scaffold	CDC	SAMN02353012	GCA_000622555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/555/GCA_000622555.1_Ec2010EL-1699	25103754	2010EL-1699
Escherichia coli O26:H11 str. 2010C-4244	1446722	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.39885	50.3	-	JHFD01	256	5927	5429	4/9/14	2/25/17	Scaffold	CDC	SAMN02352985	GCA_000622575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/575/GCA_000622575.2_Ec2010C-4244	25103754	2010C-4244
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00343	39.7	-	FEMO01	40	2212	1994	2/9/16	3/5/17	Scaffold	SC	SAMEA2383228	GCA_900021075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/075/GCA_900021075.1_12754_4_18	-	2842STDY5753775
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72026	52	-	CIWR01	58	4880	4504	3/21/15	2/27/17	Scaffold	SC	SAMEA2072502	GCA_001166565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/565/GCA_001166565.1_10349_1_28	-	ERL07263
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80112	32.7	-	FGMC01	47	2898	2742	2/10/16	3/5/17	Contig	SC	SAMEA1464494	GCA_900039085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/085/GCA_900039085.1_7521_5_90	-	st1461
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80687	32.7	-	FGMI01	51	2922	2747	2/10/16	3/5/17	Contig	SC	SAMEA1464670	GCA_900039095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/095/GCA_900039095.1_7521_6_4	-	st1477
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74568	52.1	-	CJSS01	45	4913	4550	3/21/15	2/27/17	Scaffold	SC	SAMEA1903862	GCA_001166585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/585/GCA_001166585.1_9475_6_36	-	1021854
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07031	39.7	-	FENZ01	56	2272	2024	2/9/16	3/8/17	Scaffold	SC	SAMEA2674567	GCA_900021085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/085/GCA_900021085.1_14355_8_40	-	2842STDY5881827
Escherichia coli O26:H11 str. 2009C-3996	1446714	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.49312	50.3	-	JHGV01	269	6034	5536	4/9/14	2/25/17	Scaffold	CDC	SAMN02352939	GCA_000622595.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/595/GCA_000622595.2_Ec2009C-3996	25103754	2009C-3996
Escherichia coli O26:H11 str. 2009C-4760	1446716	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.37857	50.3	-	JHGK01	298	5899	5400	4/9/14	2/25/17	Scaffold	CDC	SAMN02352950	GCA_000622615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/615/GCA_000622615.2_Ec2009C-4760	25103754	2009C-4760
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09949	39.6	-	FEOG01	44	2286	2058	2/9/16	3/13/17	Scaffold	SC	SAMEA2674602	GCA_900021095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/095/GCA_900021095.1_14355_8_75	-	2842STDY5881862
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73784	52	-	CJXZ01	48	4891	4538	3/21/15	2/27/17	Scaffold	SC	SAMEA2056369	GCA_001166905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/166/905/GCA_001166905.1_9953_5_54	-	A389
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86725	32.7	-	FGMJ01	52	3008	2818	2/10/16	3/5/17	Contig	SC	SAMEA1464405	GCA_900039105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/105/GCA_900039105.1_7521_6_6	-	st1483
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87674	32.7	-	FGMN01	56	2989	2828	2/10/16	3/5/17	Contig	SC	SAMEA1464425	GCA_900039115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/115/GCA_900039115.1_7521_6_12	-	st1496
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72028	52	-	CJFR01	56	4888	4515	3/21/15	2/27/17	Scaffold	SC	SAMEA1971601	GCA_001167045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/045/GCA_001167045.1_10561_2_39	-	np87
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07365	39.6	-	FDQP01	23	2282	2023	2/9/16	3/13/17	Scaffold	SC	SAMEA2239129	GCA_900021185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/185/GCA_900021185.1_11860_7_90	-	2842STDY5644511
Escherichia coli O26:H11 str. 2009C-4826	1446717	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.37258	50.4	-	JHGI01	293	5871	5393	4/9/14	2/25/17	Scaffold	CDC	SAMN02352952	GCA_000622635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/635/GCA_000622635.2_Ec2009C-4826	25103754	2009C-4826
Escherichia coli O26:H11 str. 2010C-4834	1446725	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.4487	50.4	-	JHMN01	284	5998	5481	4/9/14	2/25/17	Scaffold	CDC	SAMN02353004	GCA_000622655.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/655/GCA_000622655.2_Ec2010C-4834	25103754	2010C-4834
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.25419	39.5	-	FDRR01	64	2536	2262	2/9/16	3/13/17	Scaffold	SC	SAMEA2239145	GCA_900021195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/195/GCA_900021195.1_11860_8_11	-	2842STDY5644527
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72667	52	-	CJOW01	44	4895	4539	3/21/15	2/27/17	Scaffold	SC	SAMEA1572787	GCA_001167105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/105/GCA_001167105.1_8447_8_21	-	MDUST93
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.76046	32.7	-	FGMO01	18	2901	2748	2/10/16	3/5/17	Contig	SC	SAMEA1464418	GCA_900039125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/125/GCA_900039125.1_7748_6_19	-	st1498
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78468	32.7	-	FGMP01	34	2898	2728	2/10/16	3/5/17	Contig	SC	SAMEA1464455	GCA_900039135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/135/GCA_900039135.1_7521_6_15	-	st1506
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93103	51.8	-	CJME01	65	5135	4749	3/21/15	2/27/17	Scaffold	SC	SAMEA2148840	GCA_001167165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/165/GCA_001167165.1_10607_1_91	-	2012-011809
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99224	39.8	-	FDRB01	46	2193	1934	2/9/16	3/13/17	Scaffold	SC	SAMEA2239162	GCA_900021205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/205/GCA_900021205.1_11860_8_28	-	2842STDY5644544
Escherichia coli O26:H11 str. 2010C-3051	1446718	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.36758	50.3	-	JHGA01	269	5873	5373	4/9/14	2/25/17	Scaffold	CDC	SAMN02352960	GCA_000622675.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/675/GCA_000622675.2_Ec2010C-3051	25103754	2010C-3051
Escherichia coli O26:H11 str. 2010C-3472	1446719	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.35759	50.4	-	JHFX01	299	5860	5364	4/9/14	2/25/17	Scaffold	CDC	SAMN02352964	GCA_000622695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/695/GCA_000622695.2_Ec2010C-3472	25103754	2010C-3472
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.9914	39.8	-	FDQR01	48	2195	1937	2/9/16	3/15/17	Scaffold	SC	SAMEA2239137	GCA_900021215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/215/GCA_900021215.1_11860_8_2	-	2842STDY5644519
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72242	52	-	CJPX01	46	4894	4544	3/21/15	2/27/17	Scaffold	SC	SAMEA1572811	GCA_001167305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/305/GCA_001167305.1_8490_5_5	-	MDUST5
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83727	32.7	-	FGMV01	51	2934	2780	2/10/16	3/6/17	Contig	SC	SAMEA1464673	GCA_900039145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/145/GCA_900039145.1_7521_6_19	-	st1523
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83445	32.7	-	FGMY01	49	2934	2783	2/10/16	3/5/17	Contig	SC	SAMEA1464235	GCA_900039155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/155/GCA_900039155.1_7521_6_23	-	st1530
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73424	52.1	-	CJAD01	56	4916	4561	3/21/15	2/27/17	Scaffold	SC	SAMEA2143343	GCA_001167345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/345/GCA_001167345.1_10492_1_50	-	MDUST258
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12339	39.6	-	FDRO01	50	2371	2122	2/9/16	3/13/17	Scaffold	SC	SAMEA2239160	GCA_900021225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/225/GCA_900021225.1_11860_8_26	-	2842STDY5644542
Escherichia coli O26:H11 str. 2010C-3871	1446720	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.46127	50.2	-	JHFJ01	303	5973	5470	4/9/14	2/25/17	Scaffold	CDC	SAMN02352978	GCA_000622715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/715/GCA_000622715.2_Ec2010C-3871	25103754	2010C-3871
Escherichia coli O26:H11 str. 2010C-3902	1446721	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.38495	50.4	-	JHFH01	304	5887	5387	4/9/14	2/25/17	Scaffold	CDC	SAMN02352980	GCA_000622735.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/735/GCA_000622735.2_Ec2010C-3902	25103754	2010C-3902
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05714	39.6	-	FDSG01	31	2228	2017	2/9/16	3/5/17	Scaffold	SC	SAMEA2239167	GCA_900021235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/235/GCA_900021235.1_11860_8_34	-	2842STDY5644549
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.834	52	-	CJHC01	158	5010	4588	3/21/15	2/27/17	Scaffold	SC	SAMEA2150175	GCA_001167405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/405/GCA_001167405.1_10562_2_41	-	MDUST272
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78859	32.7	-	FGNA01	43	2873	2731	2/10/16	3/5/17	Contig	SC	SAMEA1464220	GCA_900039165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/165/GCA_900039165.1_7521_6_26	-	st1540
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83414	32.7	-	FGMZ01	47	2930	2775	2/10/16	3/6/17	Contig	SC	SAMEA1464257	GCA_900039175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/175/GCA_900039175.1_7521_6_25	-	st1536
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7213	52	-	CJAV01	52	4880	4519	3/21/15	2/27/17	Scaffold	SC	SAMEA2155766	GCA_001167605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/605/GCA_001167605.1_10492_1_74	-	MDUST387
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0146	39.7	-	FDRD01	34	2235	2014	2/9/16	3/6/17	Scaffold	SC	SAMEA2239120	GCA_900021245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/245/GCA_900021245.1_11860_7_81	-	2842STDY5644501
Escherichia coli O26:H11 str. 2009C-3689	1446713	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.26742	50.3	-	JHGX01	212	5680	5227	4/9/14	2/25/17	Scaffold	CDC	SAMN02352936	GCA_000622755.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/755/GCA_000622755.2_Ec2009C-3689	25103754	2009C-3689
Escherichia coli O26:H11 str. 2011C-3270	1446728	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.46829	50.3	-	JHLY01	288	6041	5521	4/9/14	2/25/17	Scaffold	CDC	SAMN02353019	GCA_000622775.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/775/GCA_000622775.2_Ec2011C-3270	25103754	2011C-3270
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99397	39.7	-	FDRZ01	33	2207	1988	2/9/16	3/13/17	Scaffold	SC	SAMEA2239147	GCA_900021255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/255/GCA_900021255.1_11860_8_13	-	2842STDY5644529
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93183	51.8	-	CJVQ01	64	5130	4751	3/21/15	2/27/17	Scaffold	SC	SAMEA2056657	GCA_001167765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/765/GCA_001167765.1_9870_8_59	-	2006-008616
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.842	32.7	-	FGNB01	51	2940	2785	2/10/16	3/5/17	Contig	SC	SAMEA1464203	GCA_900039185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/185/GCA_900039185.1_7521_6_27	-	st1547
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83806	32.7	-	FGNC01	60	2940	2782	2/10/16	3/5/17	Contig	SC	SAMEA1464215	GCA_900039195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/195/GCA_900039195.1_7521_6_28	-	st1549
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74626	52.1	-	CJSN01	47	4918	4546	3/21/15	2/27/17	Scaffold	SC	SAMEA1903856	GCA_001168005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/005/GCA_001168005.1_9475_6_27	-	1016653
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01341	39.7	-	FDRP01	31	2258	2003	2/9/16	3/13/17	Scaffold	SC	SAMEA2239135	GCA_900021265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/265/GCA_900021265.1_11860_7_96	-	2842STDY5644517
Escherichia coli O26:H11 str. 2011C-3282	1446730	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.47621	50.3	-	JHLX01	290	6026	5506	4/9/14	2/25/17	Scaffold	CDC	SAMN02353021	GCA_000622795.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/795/GCA_000622795.2_Ec2011C-3282	25103754	2011C-3282
Escherichia coli O26:H11 str. 2011C-3655	1446733	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.31188	50.4	-	JHLN01	271	5795	5303	4/9/14	2/25/17	Scaffold	CDC	SAMN02353033	GCA_000622855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/855/GCA_000622855.2_Ec2011C-3655	25103754	2011C-3655
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08942	39.6	-	FDSL01	31	2282	2032	2/9/16	3/13/17	Scaffold	SC	SAMEA2239184	GCA_900021275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/275/GCA_900021275.1_11860_8_52	-	2842STDY5644566
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7638	52.1	-	CJJN01	46	4926	4574	3/21/15	2/27/17	Scaffold	SC	SAMEA1930146	GCA_001168125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/125/GCA_001168125.1_10592_2_50	-	E98-4364
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77261	32.7	-	FGNE01	14	2877	2726	2/10/16	3/6/17	Contig	SC	SAMEA1464531	GCA_900039205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/205/GCA_900039205.1_7521_6_31	-	st1565
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82639	32.7	-	FGNG01	54	2920	2768	2/10/16	3/5/17	Contig	SC	SAMEA1464552	GCA_900039215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/215/GCA_900039215.1_7521_6_33	-	st1571
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74184	52.1	-	CJMO01	49	4908	4540	3/21/15	2/27/17	Scaffold	SC	SAMEA2150723	GCA_001168285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/285/GCA_001168285.1_10607_2_26	-	1037921
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06528	39.6	-	FDSO01	39	2270	2029	2/9/16	3/13/17	Scaffold	SC	SAMEA2239189	GCA_900021285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/285/GCA_900021285.1_11860_8_57	-	2842STDY5644571
Escherichia coli O26:H11 str. 2009C-3612	1446712	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.23364	50.3	-	JHGZ01	231	5637	5175	4/9/14	2/25/17	Scaffold	CDC	SAMN02352934	GCA_000622875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/622/875/GCA_000622875.2_Ec2009C-3612	25103754	2009C-3612
Escherichia coli O78:H12 str. 00-3279	1446756	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.16125	50.4	-	JFBE01	237	5551	5120	6/11/14	2/25/17	Scaffold	CDC	SAMN02352890	GCA_000701105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/105/GCA_000701105.2_ASM70110v2	25103754	00-3279
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10832	39.6	-	FDSV01	38	2279	2077	2/9/16	3/5/17	Scaffold	SC	SAMEA2239199	GCA_900021295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/295/GCA_900021295.1_11860_8_67	-	2842STDY5644581
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82391	52	-	CJHV01	73	5022	4593	3/21/15	2/27/17	Scaffold	SC	SAMEA2143003	GCA_001168525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/525/GCA_001168525.1_10562_2_61	-	MDUST371
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.90317	32.7	-	FFYG01	58	3064	2881	2/10/16	3/5/17	Contig	SC	SAMEA1464289	GCA_900039665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/665/GCA_900039665.1_7554_6_91	-	st336
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8058	32.7	-	FGAP01	74	2897	2762	2/10/16	3/6/17	Contig	SC	SAMEA1317364	GCA_900039675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/675/GCA_900039675.1_7414_8_34	-	st584
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74608	52.1	-	CJSZ01	46	4918	4548	3/21/15	2/27/17	Scaffold	SC	SAMEA1903874	GCA_001168685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/685/GCA_001168685.1_9475_6_47	-	1032463
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0777	39.6	-	FDST01	38	2272	2039	2/9/16	3/13/17	Scaffold	SC	SAMEA2239195	GCA_900021305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/305/GCA_900021305.1_11860_8_63	-	2842STDY5644577
Escherichia coli O111:NM str. 01-3076	1446512	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.05664	50.4	-	JFGU01	210	5441	4977	6/11/14	2/25/17	Scaffold	CDC	SAMN02352891	GCA_000701125.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/701/125/GCA_000701125.2_ASM70112v2	25103754	Jan-76
Escherichia coli K1	1392869	PRJNA257953	257953	Proteobacteria	Gammaproteobacteria	5.17986	50.9	-	JQFC01	844	5460	4973	8/21/14	2/23/17	Scaffold	"Nottingham Trent University, UK"	SAMN02980947	GCA_000742505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/505/GCA_000742505.1_E_coli_k1_910	26497222	910
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02333	39.7	-	FDSW01	41	2208	1982	2/9/16	3/13/17	Scaffold	SC	SAMEA2239201	GCA_900021315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/315/GCA_900021315.1_11860_8_69	-	2842STDY5644583
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72963	52	-	CJHA01	58	4902	4531	3/21/15	2/27/17	Scaffold	SC	SAMEA2163299	GCA_001168985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/985/GCA_001168985.1_10562_2_34	-	MDUST254
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.73429	32.7	-	FGAR01	20	2812	2696	2/10/16	3/5/17	Contig	SC	SAMEA1464299	GCA_900039685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/685/GCA_900039685.1_7748_6_9	-	st586
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85755	32.7	-	FGBZ01	60	2955	2799	2/10/16	3/5/17	Contig	SC	SAMEA1464361	GCA_900039695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/695/GCA_900039695.1_7712_8_38	-	st725
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7245	52	-	CIXO01	63	4883	4508	3/21/15	2/27/17	Scaffold	SC	SAMEA2072813	GCA_001169045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/045/GCA_001169045.1_10349_1_54	-	ERL102156
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08204	39.7	-	FDTA01	50	2312	2061	2/9/16	3/13/17	Scaffold	SC	SAMEA2239208	GCA_900021325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/325/GCA_900021325.1_11860_8_76	-	2842STDY5644590
Escherichia coli K1	1392869	PRJNA257957	257957	Proteobacteria	Gammaproteobacteria	5.06774	51	-	JQFE01	856	5398	4844	8/21/14	2/23/17	Scaffold	"Nottingham Trent University, UK"	SAMN02980963	GCA_000742555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/555/GCA_000742555.1_E_coli_k1_929	26497222	929
Escherichia coli K1	1392869	PRJNA257973	257973	Proteobacteria	Gammaproteobacteria	5.19427	50.6	-	JQFH01	604	5627	4920	8/21/14	2/23/17	Scaffold	"Nottingham Trent University, UK"	SAMN02981007	GCA_000742575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/575/GCA_000742575.1_E_coli_k1_943	26497222	943
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04832	39.6	-	FDTP01	27	2250	2022	2/9/16	3/13/17	Scaffold	SC	SAMEA2239227	GCA_900021335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/335/GCA_900021335.1_11860_8_95	-	2842STDY5644610
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.74057	52.1	-	CJOM01	80	4919	4546	3/21/15	2/27/17	Scaffold	SC	SAMEA1406344	GCA_001169625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/625/GCA_001169625.1_7468_7_93	-	IB5383
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79977	32.7	-	FGDZ01	60	2894	2749	2/10/16	3/5/17	Contig	SC	SAMEA1464461	GCA_900039705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/705/GCA_900039705.1_7554_6_66	-	st273
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8064	32.7	-	FGHJ01	49	2895	2751	2/10/16	3/5/17	Contig	SC	SAMEA1464210	GCA_900039715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/715/GCA_900039715.1_7521_5_2	-	st978
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72072	52	-	CJFG01	57	4886	4511	3/21/15	2/27/17	Scaffold	SC	SAMEA2162538	GCA_001169845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/845/GCA_001169845.1_10561_2_27	-	np81
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99892	39.7	-	FDUB01	34	2203	1993	2/9/16	3/5/17	Scaffold	SC	SAMEA2239240	GCA_900021345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/345/GCA_900021345.1_11861_5_13	-	2842STDY5644623
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.44365	50.2	-	CCPZ01	273	6140	5438	9/6/14	2/23/17	Scaffold	NTNU	SAMEA2593928	GCA_000752115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/115/GCA_000752115.1_FHI46	-	E. coli
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.54312	50.4	-	CCQW01	237	6140	5461	9/5/14	2/23/17	Scaffold	NTNU	SAMEA2593933	GCA_000752135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/135/GCA_000752135.1_FHI51	-	E. coli
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06937	39.6	-	FDUD01	19	2279	2037	2/9/16	3/13/17	Scaffold	SC	SAMEA2239243	GCA_900021355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/355/GCA_900021355.1_11861_5_16	-	2842STDY5644626
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71984	52	-	CIXW01	55	4884	4524	3/21/15	2/27/17	Scaffold	SC	SAMEA1969916	GCA_001170165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/165/GCA_001170165.1_10349_1_64	-	ERL111572
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81801	32.7	-	FGJW01	66	2913	2760	2/10/16	3/5/17	Contig	SC	SAMEA1469708	GCA_900039725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/725/GCA_900039725.1_7480_7_54	-	st1259
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79825	32.7	-	FGJY01	57	2892	2749	2/10/16	3/6/17	Contig	SC	SAMEA1469700	GCA_900039745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/745/GCA_900039745.1_7480_7_57	-	st1270
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71994	52	-	CIYA01	56	4886	4509	3/21/15	2/27/17	Scaffold	SC	SAMEA2072663	GCA_001170285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/285/GCA_001170285.1_10349_1_68	-	ERL113434
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01914	39.7	-	FDUX01	22	2219	1988	2/9/16	3/13/17	Scaffold	SC	SAMEA2239286	GCA_900021365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/365/GCA_900021365.1_11861_5_61	-	2842STDY5644670
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.10401	50.6	-	CCQH01	196	5434	4975	9/6/14	2/23/17	Scaffold	NTNU	SAMEA2593934	GCA_000752155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/155/GCA_000752155.1_FHI52	-	E. coli
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	4.93445	50.5	-	CCPY01	132	5203	4742	9/6/14	2/23/17	Scaffold	NTNU	SAMEA2593924	GCA_000752175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/175/GCA_000752175.1_FHI41	-	E. coli
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08037	39.7	-	FDVF01	19	2300	2066	2/9/16	3/5/17	Scaffold	SC	SAMEA2239297	GCA_900021375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/375/GCA_900021375.1_11861_5_72	-	2842STDY5644681
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72812	52	-	CJPP01	45	4889	4539	3/21/15	2/27/17	Scaffold	SC	SAMEA1572865	GCA_001170905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/905/GCA_001170905.1_8490_5_21	-	MDUST21
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83693	32.7	-	FGKS01	107	2971	2812	2/10/16	3/5/17	Contig	SC	SAMEA1469649	GCA_900039755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/755/GCA_900039755.1_7480_7_83	-	st1321
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81666	32.7	-	FGKR01	73	2921	2768	2/10/16	3/6/17	Contig	SC	SAMEA1469654	GCA_900039765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/765/GCA_900039765.1_7480_7_86	-	st1326
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73768	52.1	-	CJDS01	42	4908	4560	3/21/15	2/27/17	Scaffold	SC	SAMEA2163270	GCA_001170985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/985/GCA_001170985.1_10541_2_2	-	MDUST111
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06806	39.6	-	FDVV01	34	2252	2003	2/9/16	3/18/17	Scaffold	SC	SAMEA2238293	GCA_900021385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/385/GCA_900021385.1_11860_4_18	-	2842STDY5643662
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.39579	50.4	-	CCPT01	162	5910	5289	9/6/14	2/23/17	Scaffold	NTNU	SAMEA2593890	GCA_000752195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/195/GCA_000752195.1_FHI3	-	E. coli
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.27342	50.4	-	CCQP01	111	5543	5132	9/6/14	2/23/17	Scaffold	NTNU	SAMEA2593949	GCA_000752235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/235/GCA_000752235.1_FHI69	-	E. coli
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08948	39.6	-	FDWD01	22	2319	2079	2/9/16	3/13/17	Scaffold	SC	SAMEA2238309	GCA_900021395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/395/GCA_900021395.1_11860_4_35	-	2842STDY5643678
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93295	51.8	-	CJVO01	60	5129	4749	3/21/15	2/27/17	Scaffold	SC	SAMEA2055771	GCA_001171105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/105/GCA_001171105.1_9870_8_60	-	2007-015726
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82692	32.7	-	FGKX01	63	2924	2779	2/10/16	3/5/17	Contig	SC	SAMEA1469588	GCA_900039775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/775/GCA_900039775.1_7480_7_93	-	st1354
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83415	32.7	-	FGLH01	59	2942	2780	2/10/16	3/6/17	Contig	SC	SAMEA1464326	GCA_900039785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/785/GCA_900039785.1_7521_5_59	-	st1383
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73216	52.1	-	CILI01	47	4914	4557	3/21/15	2/27/17	Scaffold	SC	SAMEA1930251	GCA_001171125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/125/GCA_001171125.1_10592_2_47	-	Sep-21
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01534	39.7	-	FDWS01	25	2237	2012	2/9/16	3/13/17	Scaffold	SC	SAMEA2238338	GCA_900021405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/405/GCA_900021405.1_11860_4_65	-	2842STDY5643707
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.28456	50.3	-	CCRB01	285	5735	5256	9/5/14	2/23/17	Scaffold	NTNU	SAMEA2593940	GCA_000752255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/255/GCA_000752255.1_FHI60	-	E. coli
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.47362	50.2	-	CCQU01	284	6004	5399	9/5/14	2/23/17	Scaffold	NTNU	SAMEA2593958	GCA_000752295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/295/GCA_000752295.1_FHI78	-	E. coli
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15676	39.6	-	FDXF01	37	2382	2136	2/9/16	3/15/17	Scaffold	SC	SAMEA2238360	GCA_900021415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/415/GCA_900021415.1_12045_8_81	-	2842STDY5643729
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB1252	205706	Proteobacteria	Gammaproteobacteria	4.72294	52	-	CJSA01	39	4874	4516	3/21/15	2/27/17	Scaffold	SC	SAMEA1903751	GCA_001171245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/245/GCA_001171245.1_9475_4_49	-	D7649
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77534	32.7	-	FGLP01	45	2840	2695	2/10/16	3/5/17	Contig	SC	SAMEA1464224	GCA_900039795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/795/GCA_900039795.1_7521_5_71	-	st1426
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83208	32.7	-	FGLQ01	63	2934	2778	2/10/16	3/6/17	Contig	SC	SAMEA1464206	GCA_900039805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/805/GCA_900039805.1_7521_5_72	-	st1429
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71555	52	-	CJGV01	54	4870	4506	3/21/15	2/27/17	Scaffold	SC	SAMEA2146180	GCA_001171345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/345/GCA_001171345.1_10562_2_30	-	MDUST240
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99161	39.8	-	FDXM01	50	2189	1939	2/9/16	3/13/17	Scaffold	SC	SAMEA2238367	GCA_900021425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/425/GCA_900021425.1_11860_4_93	-	2842STDY5643736
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.15448	50.5	-	CCVP01	99	5396	4996	9/3/14	2/23/17	Scaffold	NTNU	SAMEA2593916	GCA_000752315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/315/GCA_000752315.1_FHI32	-	E. coli
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.38499	50.4	-	CCQD01	224	5974	5304	9/6/14	2/23/17	Scaffold	NTNU	SAMEA2593932	GCA_000752355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/355/GCA_000752355.1_FHI50	-	E. coli
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08069	39.5	-	FDXP01	70	2311	2024	2/9/16	3/13/17	Scaffold	SC	SAMEA2238370	GCA_900021435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/435/GCA_900021435.1_11860_4_96	-	2842STDY5643739
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.78074	52.1	-	CJAT01	61	4967	4609	3/21/15	2/27/17	Scaffold	SC	SAMEA2161520	GCA_001172105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/105/GCA_001172105.1_10492_1_71	-	MDUST382
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83523	32.7	-	FGLR01	59	2937	2773	2/10/16	3/6/17	Contig	SC	SAMEA1464194	GCA_900039815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/815/GCA_900039815.1_7521_5_74	-	st1433
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.7155	32.7	-	FGMD01	14	2824	2666	2/10/16	3/5/17	Contig	SC	SAMEA1464705	GCA_900039825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/825/GCA_900039825.1_7748_6_18	-	st1470
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71748	52.1	-	CJLN01	43	4883	4510	3/21/15	2/27/17	Scaffold	SC	SAMEA1930157	GCA_001172125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/125/GCA_001172125.1_10593_2_9	-	E99-6785
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98838	39.8	-	FDYI01	55	2192	1930	2/9/16	3/15/17	Scaffold	SC	SAMEA2238407	GCA_900021445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/445/GCA_900021445.1_11860_5_37	-	2842STDY5643777
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.20477	50.7	-	CCQQ01	212	5717	5089	9/6/14	2/23/17	Scaffold	NTNU	SAMEA2593948	GCA_000752415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/415/GCA_000752415.1_FHI68	-	E. coli
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.35562	50.4	-	CCPO01	188	5882	5248	9/5/14	2/23/17	Scaffold	NTNU	SAMEA2593888	GCA_000752435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/435/GCA_000752435.1_FHI1	-	E. coli
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08695	39.6	-	FDYG01	30	2313	2075	2/9/16	3/13/17	Scaffold	SC	SAMEA2238401	GCA_900021455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/455/GCA_900021455.1_11860_5_32	-	2842STDY5643771
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.97669	52.1	-	CQGV01	57	5148	4873	3/23/15	2/27/17	Scaffold	SC	SAMEA1568494	GCA_001172145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/145/GCA_001172145.1_8490_2_61	-	CH18
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.88301	32.7	-	FGMM01	59	3006	2853	2/10/16	3/5/17	Contig	SC	SAMEA1464373	GCA_900039835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/835/GCA_900039835.1_7521_6_10	-	st1493
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80454	32.7	-	FGMQ01	50	2896	2745	2/10/16	3/5/17	Contig	SC	SAMEA1464406	GCA_900039845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/845/GCA_900039845.1_7521_6_14	-	st1503
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93352	51.8	-	CJVW01	53	5131	4753	3/21/15	2/27/17	Scaffold	SC	SAMEA2058431	GCA_001172465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/465/GCA_001172465.1_9870_8_70	-	BC2011-1739
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99257	39.8	-	FDRC01	45	2193	1933	2/9/16	3/13/17	Scaffold	SC	SAMEA2239155	GCA_900021545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/545/GCA_900021545.1_11860_8_21	-	2842STDY5644537
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.36509	50.6	-	CCVO01	121	5743	5291	9/3/14	2/23/17	Scaffold	NTNU	SAMEA2593915	GCA_000752455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/455/GCA_000752455.1_FHI31	-	E. coli
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.43329	50.5	-	CCQF01	186	5984	5385	9/6/14	2/23/17	Scaffold	NTNU	SAMEA2593889	GCA_000752495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/495/GCA_000752495.1_FHI2	-	E. coli
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05851	39.7	-	FDTC01	52	2252	2016	2/9/16	3/13/17	Scaffold	SC	SAMEA2239211	GCA_900021555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/555/GCA_900021555.1_11860_8_79	-	2842STDY5644593
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71978	52	-	CJAM01	54	4877	4521	3/21/15	2/27/17	Scaffold	SC	SAMEA2146238	GCA_001172485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/485/GCA_001172485.1_10492_1_64	-	MDUST354
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77989	32.7	-	FGMT01	21	2946	2772	2/10/16	3/5/17	Contig	SC	SAMEA1464470	GCA_900039855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/855/GCA_900039855.1_7748_6_21	-	st1510
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80469	32.7	-	FGMU01	57	2897	2743	2/10/16	3/5/17	Contig	SC	SAMEA1464502	GCA_900039865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/865/GCA_900039865.1_7521_6_17	-	st1521
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	5.02127	52.2	-	CQGR01	55	5233	4948	3/23/15	2/27/17	Scaffold	SC	SAMEA1568509	GCA_001172545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/545/GCA_001172545.1_8490_2_78	-	CH35
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05817	39.5	-	FDTI01	28	2269	2035	2/9/16	3/5/17	Scaffold	SC	SAMEA2239219	GCA_900021565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/565/GCA_900021565.1_11860_8_87	-	2842STDY5644601
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.11525	50.3	-	CCQL01	453	5409	5048	9/6/14	2/23/17	Scaffold	NTNU	SAMEA2593941	GCA_000752515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/515/GCA_000752515.1_FHI61	-	E. coli
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.26902	50.3	-	CCQO01	169	5779	5166	9/5/14	2/23/17	Scaffold	NTNU	SAMEA2593947	GCA_000752535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/535/GCA_000752535.1_FHI67	-	E. coli
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.9924	39.8	-	FDUP01	44	2194	1926	2/9/16	3/13/17	Scaffold	SC	SAMEA2239270	GCA_900021575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/575/GCA_900021575.1_11861_5_45	-	2842STDY5644653
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72574	52	-	CJPJ01	43	4883	4528	3/21/15	2/27/17	Scaffold	SC	SAMEA1572860	GCA_001173245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/245/GCA_001173245.1_8490_5_15	-	MDUST15
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.88195	32.7	-	FGNF01	57	3028	2849	2/10/16	3/5/17	Contig	SC	SAMEA1464538	GCA_900039875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/875/GCA_900039875.1_7521_6_34	-	st1578
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8342	32.7	-	FGNI01	55	2938	2780	2/10/16	3/5/17	Contig	SC	SAMEA1464474	GCA_900039885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/885/GCA_900039885.1_7521_6_37	-	st1584
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73327	52	-	CJCQ01	48	4893	4542	3/21/15	2/27/17	Scaffold	SC	SAMEA2158835	GCA_001173525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/525/GCA_001173525.1_10493_1_75	-	MDUST348
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06786	39.6	-	FDUU01	33	2245	2008	2/9/16	3/13/17	Scaffold	SC	SAMEA2239278	GCA_900021585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/585/GCA_900021585.1_11861_5_53	-	2842STDY5644662
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.03543	50.6	-	CCQT01	222	5529	4916	9/6/14	2/23/17	Scaffold	NTNU	SAMEA2593956	GCA_000752555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/555/GCA_000752555.1_FHI76	-	E. coli
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.36375	50.7	-	CCQV01	227	5841	5300	9/5/14	2/23/17	Scaffold	NTNU	SAMEA2593960	GCA_000752575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/575/GCA_000752575.1_FHI81	-	E. coli
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.18324	39.5	-	FDWL01	89	2406	2142	2/9/16	3/18/17	Scaffold	SC	SAMEA2238326	GCA_900021595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/595/GCA_900021595.1_11860_4_53	-	2842STDY5643695
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70023	52.1	-	CJHN01	58	4865	4499	3/21/15	2/27/17	Scaffold	SC	SAMEA2147761	GCA_001174065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/065/GCA_001174065.1_10562_2_53	-	MDUST350
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80715	32.7	-	FGNJ01	52	2899	2751	2/10/16	3/5/17	Contig	SC	SAMEA1464500	GCA_900039895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/895/GCA_900039895.1_7521_6_39	-	st1592
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85474	32.7	-	FGNK01	70	2969	2810	2/10/16	3/5/17	Contig	SC	SAMEA1464623	GCA_900039905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/905/GCA_900039905.1_7521_6_40	-	st1594
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.90068	52	-	CJAA01	72	5130	4746	3/21/15	2/27/17	Scaffold	SC	SAMEA2159213	GCA_001174245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/245/GCA_001174245.1_10492_1_45	-	MDUST252
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11274	39.6	-	FDYD01	56	2363	2108	2/9/16	3/5/17	Scaffold	SC	SAMEA2238398	GCA_900021605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/605/GCA_900021605.1_11860_5_28	-	2842STDY5643768
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.16125	50.4	-	CCQE01	151	5551	5037	9/5/14	2/23/17	Scaffold	NTNU	SAMEA2593902	GCA_000752595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/595/GCA_000752595.1_FHI16	-	E. coli
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.20775	50.6	-	CCVR01	447	5875	5169	9/3/14	2/23/17	Scaffold	NTNU	SAMEA2593981	GCA_000752615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/615/GCA_000752615.1_StOlav143	-	E. coli
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98829	39.8	-	FDZK01	44	2192	1933	2/9/16	3/13/17	Scaffold	SC	SAMEA2238452	GCA_900021615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/615/GCA_900021615.1_11860_5_82	-	2842STDY5643822
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.85192	52	-	CJBV01	62	5063	4668	3/21/15	2/27/17	Scaffold	SC	SAMEA2145611	GCA_001174425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/425/GCA_001174425.1_10493_1_41	-	MDUST220
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78478	32.7	-	FGNL01	40	2875	2726	2/10/16	3/6/17	Contig	SC	SAMEA1464625	GCA_900039915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/915/GCA_900039915.1_7521_6_42	-	st1596
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78591	32.7	-	FGNM01	48	2873	2720	2/10/16	3/5/17	Contig	SC	SAMEA1464320	GCA_900039925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/925/GCA_900039925.1_7521_6_43	-	st1597
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.95872	51.8	-	CJVD01	120	5142	4750	3/21/15	2/27/17	Scaffold	SC	SAMEA2055645	GCA_001174645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/645/GCA_001174645.1_9870_8_39	-	2010-011187
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13461	39.6	-	FDZZ01	75	2389	2128	2/9/16	3/13/17	Scaffold	SC	SAMEA2238481	GCA_900021625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/625/GCA_900021625.1_11860_6_14	-	2842STDY5643852
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.35946	50.4	-	CCVQ01	176	5746	5169	9/3/14	2/23/17	Scaffold	NTNU	SAMEA2593963	GCA_000752635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/635/GCA_000752635.1_FHI84	-	E. coli
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.38941	50.3	-	CCQA01	243	5898	5357	9/6/14	2/23/17	Scaffold	NTNU	SAMEA2593929	GCA_000752655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/655/GCA_000752655.1_FHI47	-	E. coli
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12108	39.6	-	FEFC01	31	2313	2088	2/9/16	3/13/17	Scaffold	SC	SAMEA2382546	GCA_900021635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/635/GCA_900021635.1_12673_6_1	-	2842STDY5753086
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70427	52.1	-	CJQR01	39	4853	4494	3/21/15	2/27/17	Scaffold	SC	SAMEA1572777	GCA_001174705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/705/GCA_001174705.1_8490_6_63	-	MDUST63
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82902	32.7	-	FGNS01	61	2937	2780	2/10/16	3/5/17	Contig	SC	SAMEA1464364	GCA_900039935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/935/GCA_900039935.1_7521_6_52	-	st1614
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.74	32.7	-	FGNT01	14	2854	2703	2/10/16	3/6/17	Contig	SC	SAMEA1464352	GCA_900039945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/945/GCA_900039945.1_7748_6_24	-	st1624
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA287096	287096	Proteobacteria	Gammaproteobacteria	4.94524	52.1	-	LFGW01	219	5084	4558	7/24/15	2/27/17	Scaffold	University of Coimbra	SAMN03776153	GCA_001187365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/365/GCA_001187365.1_ASM118736v1	-	Sal280
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.19118	39.5	-	FEFD01	45	2431	2190	2/9/16	3/5/17	Scaffold	SC	SAMEA2238716	GCA_900021645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/645/GCA_900021645.1_11861_2_56	-	2842STDY5644089
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.32893	50.7	-	CCRE01	161	5752	5241	9/6/14	2/23/17	Scaffold	NTNU	SAMEA2593974	GCA_000752695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/695/GCA_000752695.1_FHI96	-	E. coli
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.06196	50.5	-	CCQK01	217	5433	5023	9/6/14	2/23/17	Scaffold	NTNU	SAMEA2593937	GCA_000752735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/735/GCA_000752735.1_FHI56	-	E. coli
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99082	39.8	-	FEFW01	44	2197	1923	2/9/16	3/6/17	Scaffold	SC	SAMEA2238770	GCA_900021655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/655/GCA_900021655.1_11893_1_14	-	2842STDY5644144
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA287098	287098	Proteobacteria	Gammaproteobacteria	5.04986	52.1	-	LFGX01	873	5540	4396	7/24/15	8/8/17	Scaffold	University of Coimbra	SAMN03776158	GCA_001187375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/375/GCA_001187375.1_ASM118737v1	-	Sal368
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8542	32.7	-	FGNU01	83	2974	2817	2/10/16	3/6/17	Contig	SC	SAMEA1464340	GCA_900039955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/955/GCA_900039955.1_7521_6_54	-	st1625
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86765	32.7	-	FGNW01	96	2963	2789	2/10/16	3/5/17	Contig	SC	SAMEA1464327	GCA_900039965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/965/GCA_900039965.1_7521_6_56	-	st1634
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.99045	52.1	-	CTAN01	105	5167	4896	3/24/15	2/27/17	Scaffold	SC	SAMEA773518	GCA_001214325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/325/GCA_001214325.1_5388_1_7	-	V40
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11242	39.5	-	FCRJ01	60	2292	2029	2/6/16	3/6/17	Scaffold	SC	SAMEA2239059	GCA_900021665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/665/GCA_900021665.1_11860_7_18	-	2842STDY5644439
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.56029	50.5	-	CCPS01	192	5976	5433	9/5/14	2/23/17	Scaffold	NTNU	SAMEA2593907	GCA_000752755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/755/GCA_000752755.1_FHI22	-	E. coli
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.29341	50.3	-	CCQC01	159	5679	5162	9/5/14	2/23/17	Scaffold	NTNU	SAMEA2593892	GCA_000752775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/775/GCA_000752775.1_FHI5	-	E. coli
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1835	39.6	-	FCQQ01	53	2430	2178	2/6/16	3/13/17	Scaffold	SC	SAMEA2239058	GCA_900021675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/675/GCA_900021675.1_11860_7_17	-	2842STDY5644438
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97877	52.1	-	CTBT01	89	5168	4878	3/24/15	2/27/17	Scaffold	SC	SAMEA1522029	GCA_001214365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/365/GCA_001214365.1_8080_3_11	-	H106
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82757	32.7	-	FFOX01	73	2921	2766	2/9/16	3/6/17	Contig	SC	SAMEA1469547	GCA_900040055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/055/GCA_900040055.1_7480_8_70	-	st2467
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.97127	32.7	-	FGAH01	71	3140	2944	2/10/16	3/5/17	Contig	SC	SAMEA1317547	GCA_900040075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/075/GCA_900040075.1_7414_8_24	-	st557
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.97376	52.1	-	CTBN01	97	5162	4882	3/24/15	2/27/17	Scaffold	SC	SAMEA1484076	GCA_001214425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/425/GCA_001214425.1_8036_3_65	-	SPAINg
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00332	39.7	-	FCSK01	38	2208	1995	2/6/16	3/13/17	Scaffold	SC	SAMEA2239083	GCA_900021685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/685/GCA_900021685.1_11860_7_44	-	2842STDY5644464
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.54374	50.3	-	CCPU01	141	5981	5468	9/6/14	2/23/17	Scaffold	NTNU	SAMEA2593920	GCA_000752815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/815/GCA_000752815.1_FHI37	-	E. coli
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	4.97858	50.5	-	CCRA01	66	5211	4847	9/5/14	2/23/17	Scaffold	NTNU	SAMEA2593935	GCA_000752835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/835/GCA_000752835.1_FHI53	-	E. coli
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98975	39.8	-	FCVC01	47	2188	1946	2/6/16	3/6/17	Scaffold	SC	SAMEA2238868	GCA_900021695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/695/GCA_900021695.1_11861_3_14	-	2842STDY5644243
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.96638	52.1	-	CTCD01	94	5163	4879	3/24/15	2/27/17	Scaffold	SC	SAMEA1484085	GCA_001214485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/485/GCA_001214485.1_8036_3_68	-	SPAINc
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84196	32.7	-	FGAV01	95	2962	2805	2/10/16	3/5/17	Contig	SC	SAMEA1317503	GCA_900040085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/085/GCA_900040085.1_7414_8_42	-	st617
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86544	32.7	-	FGDQ01	45	3003	2821	2/10/16	3/5/17	Contig	SC	SAMEA1464307	GCA_900040095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/095/GCA_900040095.1_7554_6_21	-	st162
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.96561	52.1	-	CTCC01	116	5145	4873	3/24/15	2/27/17	Scaffold	SC	SAMEA773584	GCA_001214545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/545/GCA_001214545.1_5299_6_9	-	H92
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98216	39.7	-	FCVI01	24	2192	1965	2/6/16	3/6/17	Scaffold	SC	SAMEA2238873	GCA_900021705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/705/GCA_900021705.1_11861_3_19	-	2842STDY5644248
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.64338	50.5	-	CCPX01	187	6269	5591	9/6/14	2/23/17	Scaffold	NTNU	SAMEA2593922	GCA_000752875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/875/GCA_000752875.1_FHI39	-	E. coli
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.32337	50.5	-	CCPP01	200	5822	5216	9/5/14	2/23/17	Scaffold	NTNU	SAMEA2593979	GCA_000752895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/895/GCA_000752895.1_FHI101	-	E. coli
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98233	39.8	-	FCVH01	17	2185	1973	2/6/16	3/12/17	Scaffold	SC	SAMEA2238874	GCA_900021715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/715/GCA_900021715.1_11861_3_20	-	2842STDY5644249
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.9696	52.1	-	CTCF01	77	5149	4878	3/24/15	2/27/17	Scaffold	SC	SAMEA1521990	GCA_001214705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/705/GCA_001214705.1_8080_3_36	-	H131
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.94847	32.7	-	FGDR01	57	3102	2918	2/10/16	3/5/17	Contig	SC	SAMEA1464282	GCA_900040105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/105/GCA_900040105.1_7554_6_30	-	st177
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78205	32.7	-	FGDS01	48	2865	2720	2/10/16	3/6/17	Contig	SC	SAMEA1464261	GCA_900040115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/115/GCA_900040115.1_7554_6_36	-	st191
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95892	52.1	-	CTBU01	90	5129	4870	3/24/15	2/27/17	Scaffold	SC	SAMEA773574	GCA_001214745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/745/GCA_001214745.1_5275_2_6	-	V33
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06441	39.7	-	FCZC01	44	2272	2015	2/6/16	3/13/17	Scaffold	SC	SAMEA2674620	GCA_900021725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/725/GCA_900021725.1_14355_8_93	-	2842STDY5881880
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.32169	50.3	-	CCQS01	277	5787	5270	9/6/14	2/23/17	Scaffold	NTNU	SAMEA2593957	GCA_000752915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/915/GCA_000752915.1_FHI77	-	E. coli
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.48067	50.5	-	CCQB01	140	5901	5453	9/6/14	2/23/17	Scaffold	NTNU	SAMEA2593931	GCA_000752935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/935/GCA_000752935.1_FHI49	-	E. coli
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1051	39.7	-	FCZG01	53	2322	2078	2/6/16	3/13/17	Scaffold	SC	SAMEA2674634	GCA_900021735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/735/GCA_900021735.1_14412_3_12	-	2842STDY5881894
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97402	52.1	-	CTBY01	77	5152	4878	3/24/15	2/27/17	Scaffold	SC	SAMEA1522023	GCA_001214765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/765/GCA_001214765.1_8080_3_54	-	V74
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.75744	32.7	-	FGHF01	41	2842	2679	2/10/16	3/5/17	Contig	SC	SAMEA1317365	GCA_900040125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/125/GCA_900040125.1_7414_8_92	-	st972
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.89869	32.7	-	FGJN01	82	3016	2862	2/10/16	3/5/17	Contig	SC	SAMEA1469676	GCA_900040135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/135/GCA_900040135.1_7480_7_38	-	st1209
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.9939	52.1	-	CTBF01	71	5183	4891	3/24/15	2/27/17	Scaffold	SC	SAMEA1707597	GCA_001214865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/865/GCA_001214865.1_9065_1_3	-	EWV9
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98952	39.8	-	FCZW01	47	2195	1931	2/6/16	3/13/17	Scaffold	SC	SAMEA2382607	GCA_900021745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/745/GCA_900021745.1_12673_6_62	-	2842STDY5753147
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	4.75774	50.7	-	CCVS01	129	5049	4635	9/3/14	2/23/17	Scaffold	NTNU	SAMEA2593970	GCA_000752955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/955/GCA_000752955.1_FHI91	-	E. coli
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.15753	50.7	-	CCQZ01	155	5612	5056	9/6/14	2/23/17	Scaffold	NTNU	SAMEA2593982	GCA_000752975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/975/GCA_000752975.1_StOlav172	-	E. coli
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11143	39.5	-	FDAG01	50	2322	2070	2/6/16	3/13/17	Scaffold	SC	SAMEA2382618	GCA_900021755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/755/GCA_900021755.1_12673_6_73	-	2842STDY5753158
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97204	52.1	-	CTBQ01	98	5156	4877	3/24/15	2/27/17	Scaffold	SC	SAMEA1522010	GCA_001214965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/965/GCA_001214965.1_8080_3_86	-	V106
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86605	32.7	-	FGJS01	82	2991	2837	2/10/16	3/5/17	Contig	SC	SAMEA1469605	GCA_900040145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/145/GCA_900040145.1_7480_7_47	-	st1233
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.89638	32.7	-	FGKT01	53	3033	2852	2/10/16	3/5/17	Contig	SC	SAMEA1469663	GCA_900040165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/165/GCA_900040165.1_7480_7_87	-	st1333
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.85624	52.2	-	CTAH01	71	4965	4753	3/24/15	2/27/17	Scaffold	SC	SAMEA773529	GCA_001215105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/105/GCA_001215105.1_5275_8_9	-	H67
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09239	39.6	-	FDBH01	29	2319	2061	2/6/16	3/13/17	Scaffold	SC	SAMEA2382644	GCA_900021765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/765/GCA_900021765.1_12673_7_4	-	2842STDY5753185
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.07043	50.3	-	CCPW01	61	5250	4873	9/5/14	2/25/17	Scaffold	NTNU	SAMEA2593921	GCA_000753035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/035/GCA_000753035.1_FHI38	-	E. coli
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.07562	50.4	-	CCQR01	89	5281	4951	9/5/14	2/23/17	Scaffold	NTNU	SAMEA2593953	GCA_000753075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/075/GCA_000753075.1_FHI73	-	E. coli
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1872	39.6	-	FDBI01	48	2429	2186	2/6/16	3/13/17	Scaffold	SC	SAMEA2382645	GCA_900021775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/775/GCA_900021775.1_12673_7_5	-	2842STDY5753186
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97817	52.1	-	CTBS01	73	5159	4885	3/24/15	2/27/17	Scaffold	SC	SAMEA1522016	GCA_001215145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/145/GCA_001215145.1_8080_3_51	-	V71
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82999	32.7	-	FGKU01	75	2943	2792	2/10/16	3/6/17	Contig	SC	SAMEA1469659	GCA_900040175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/175/GCA_900040175.1_7480_7_88	-	st1334
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.74181	32.7	-	FGKW01	56	2813	2663	2/10/16	3/5/17	Contig	SC	SAMEA1469589	GCA_900040185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/185/GCA_900040185.1_7480_7_91	-	st1346
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97857	52.1	-	CTAO01	74	5155	4879	3/24/15	2/27/17	Scaffold	SC	SAMEA1522018	GCA_001215365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/365/GCA_001215365.1_8080_3_46	-	H141
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08035	39.6	-	FDEZ01	37	2309	2058	2/6/16	3/6/17	Scaffold	SC	SAMEA2382741	GCA_900021785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/785/GCA_900021785.1_12718_4_6	-	2842STDY5753283
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.16381	50.7	-	CCQM01	111	5436	5059	9/6/14	2/23/17	Scaffold	NTNU	SAMEA2593927	GCA_000753115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/115/GCA_000753115.1_FHI45	-	E. coli
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.18701	50.4	-	CCQN01	155	5653	5078	9/5/14	2/23/17	Scaffold	NTNU	SAMEA2593944	GCA_000753135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/135/GCA_000753135.1_FHI64	-	E. coli
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06316	39.7	-	FDGT01	56	2274	2019	2/6/16	3/12/17	Scaffold	SC	SAMEA2382787	GCA_900021795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/795/GCA_900021795.1_12718_4_52	-	2842STDY5753329
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.94974	52.1	-	CTBM01	102	5117	4862	3/24/15	2/27/17	Scaffold	SC	SAMEA773510	GCA_001215405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/405/GCA_001215405.1_5275_7_10	-	H21
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84327	32.7	-	FGKZ01	89	2953	2795	2/10/16	3/5/17	Contig	SC	SAMEA1464196	GCA_900040195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/195/GCA_900040195.1_7521_5_49	-	st1360
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.91785	32.7	-	FGLB01	115	3085	2888	2/10/16	3/5/17	Contig	SC	SAMEA1464189	GCA_900040205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/205/GCA_900040205.1_7521_5_50	-	st1362
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95546	52.1	-	CTBI01	82	5119	4866	3/24/15	2/27/17	Scaffold	SC	SAMEA773549	GCA_001215525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/525/GCA_001215525.1_5275_1_9	-	V20
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99306	39.8	-	FDGU01	42	2177	1928	2/6/16	3/13/17	Scaffold	SC	SAMEA2382788	GCA_900021805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/805/GCA_900021805.1_12718_4_53	-	2842STDY5753330
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.24154	50.8	-	CCQX01	189	5717	5205	9/5/14	2/23/17	Scaffold	NTNU	SAMEA2593967	GCA_000753155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/155/GCA_000753155.1_FHI88	-	E. coli
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.12103	50.5	-	CCQG01	89	5337	4923	9/6/14	2/23/17	Scaffold	NTNU	SAMEA2593903	GCA_000753195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/195/GCA_000753195.1_FHI17	-	E. coli
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06789	39.6	-	FDHF01	18	2267	2037	2/6/16	3/15/17	Scaffold	SC	SAMEA2382799	GCA_900021815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/815/GCA_900021815.1_12718_4_64	-	2842STDY5753341
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.87466	52.1	-	CTCH01	66	5017	4777	3/24/15	2/27/17	Scaffold	SC	SAMEA773598	GCA_001215545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/545/GCA_001215545.1_5275_6_2	-	H04
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.89777	32.7	-	FGLC01	91	3018	2849	2/10/16	3/5/17	Contig	SC	SAMEA1464309	GCA_900040215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/215/GCA_900040215.1_7521_5_53	-	st1366
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86553	32.7	-	FGLA01	81	2987	2819	2/10/16	3/5/17	Contig	SC	SAMEA1464180	GCA_900040225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/225/GCA_900040225.1_7521_5_52	-	st1364
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	5.05904	51.9	-	CTBE01	113	5233	4943	3/24/15	2/27/17	Scaffold	SC	SAMEA773654	GCA_001215585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/585/GCA_001215585.1_5295_2_8	-	H77
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12176	39.6	-	FDKV01	45	2364	2107	2/6/16	3/13/17	Scaffold	SC	SAMEA2382900	GCA_900021825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/825/GCA_900021825.1_12718_5_70	-	2842STDY5753443
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.6574	50.5	-	CCPV01	184	6281	5614	9/6/14	2/23/17	Scaffold	NTNU	SAMEA2593919	GCA_000753215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/215/GCA_000753215.1_FHI36	-	E. coli
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	4.96003	50.5	-	CCRC01	132	5268	4834	9/6/14	2/23/17	Scaffold	NTNU	SAMEA2593965	GCA_000753255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/255/GCA_000753255.1_FHI86	-	E. coli
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99264	39.8	-	FDLQ01	44	2192	1934	2/6/16	3/13/17	Scaffold	SC	SAMEA2382921	GCA_900021835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/835/GCA_900021835.1_12718_5_91	-	2842STDY5753464
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97505	52.1	-	CTAR01	83	5156	4884	3/24/15	2/27/17	Scaffold	SC	SAMEA1522025	GCA_001215665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/665/GCA_001215665.1_8080_3_65	-	V85
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80455	32.7	-	FGLF01	82	2891	2733	2/10/16	3/5/17	Contig	SC	SAMEA1464342	GCA_900040235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/235/GCA_900040235.1_7521_5_58	-	st1380
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80255	32.7	-	FGLJ01	51	2901	2748	2/10/16	3/5/17	Contig	SC	SAMEA1464528	GCA_900040255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/255/GCA_900040255.1_7521_5_63	-	st1395
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.89307	52.2	-	CTBR01	65	5018	4779	3/24/15	2/27/17	Scaffold	SC	SAMEA773600	GCA_001215685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/685/GCA_001215685.1_5275_3_12	-	H02
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06102	39.6	-	FDLV01	46	2254	1994	2/6/16	3/15/17	Scaffold	SC	SAMEA2382926	GCA_900021845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/845/GCA_900021845.1_12754_1_1	-	2842STDY5753470
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.17784	50.5	-	CCRD01	134	5468	4944	9/6/14	2/23/17	Scaffold	NTNU	SAMEA2593973	GCA_000753275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/275/GCA_000753275.1_FHI95	-	E. coli
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.04434	50.7	-	CCQJ01	97	5352	4928	9/6/14	2/23/17	Scaffold	NTNU	SAMEA2593918	GCA_000753315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/315/GCA_000753315.1_FHI35	-	E. coli
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06885	39.7	-	FDMJ01	33	2311	2066	2/6/16	3/13/17	Scaffold	SC	SAMEA2382943	GCA_900021855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/855/GCA_900021855.1_12754_1_18	-	2842STDY5753487
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.94938	52.1	-	CTAK01	78	5113	4861	3/24/15	2/27/17	Scaffold	SC	SAMEA773604	GCA_001215725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/725/GCA_001215725.1_5275_3_8	-	V65
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83551	32.7	-	FGLL01	57	2932	2780	2/10/16	3/5/17	Contig	SC	SAMEA1464519	GCA_900040265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/265/GCA_900040265.1_7521_5_64	-	st1396
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87107	32.7	-	FGLK01	57	3009	2830	2/10/16	3/5/17	Contig	SC	SAMEA1464557	GCA_900040275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/275/GCA_900040275.1_7521_5_66	-	st1399
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97106	52.1	-	CTAI01	79	5157	4881	3/24/15	2/27/17	Scaffold	SC	SAMEA1521969	GCA_001215765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/765/GCA_001215765.1_8080_3_20	-	H115
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10091	39.6	-	FDNW01	42	2277	2054	2/6/16	3/12/17	Scaffold	SC	SAMEA2382984	GCA_900021865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/865/GCA_900021865.1_12754_1_59	-	2842STDY5753528
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.14183	50.6	-	CCQY01	334	5767	5026	9/6/14	2/23/17	Scaffold	NTNU	SAMEA2593972	GCA_000753415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/415/GCA_000753415.1_FHI93	-	E. coli
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.21883	50.4	-	CCPQ01	152	5641	5108	9/6/14	2/23/17	Scaffold	NTNU	SAMEA2593899	GCA_000753515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/515/GCA_000753515.1_FHI13	-	E. coli
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01406	39.8	-	FDPS01	19	2254	2016	2/9/16	3/13/17	Scaffold	SC	SAMEA2383034	GCA_900021875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/875/GCA_900021875.1_12754_2_14	-	2842STDY5753579
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95045	52.1	-	CTBJ01	100	5107	4861	3/24/15	2/27/17	Scaffold	SC	SAMEA773550	GCA_001215785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/785/GCA_001215785.1_5275_1_8	-	V19
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77777	32.7	-	FGLN01	57	2855	2706	2/10/16	3/6/17	Contig	SC	SAMEA1464560	GCA_900040285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/285/GCA_900040285.1_7521_5_69	-	st1405
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82195	32.7	-	FGLT01	56	2946	2762	2/10/16	3/6/17	Contig	SC	SAMEA1464182	GCA_900040295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/295/GCA_900040295.1_7521_5_77	-	st1442
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97713	52.1	-	CTAX01	80	5167	4882	3/24/15	2/27/17	Scaffold	SC	SAMEA1521988	GCA_001215865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/865/GCA_001215865.1_8080_3_26	-	H121
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06342	39.5	-	FDPR01	42	2281	2033	2/9/16	3/6/17	Scaffold	SC	SAMEA2383033	GCA_900021885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/885/GCA_900021885.1_12754_2_13	-	2842STDY5753578
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.52771	50.4	-	CCQI01	93	5669	5246	9/5/14	2/23/17	Scaffold	NTNU	SAMEA2593936	GCA_000753535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/753/535/GCA_000753535.1_FHI54	-	E. coli
Escherichia coli	562	PRJNA260344	260344	Proteobacteria	Gammaproteobacteria	5.19423	50.7	-	JRGD01	268	5634	5169	9/16/14	2/23/17	Scaffold	University of Copenhagen	SAMN03020303	GCA_000754845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/845/GCA_000754845.1_ASM75484v1	-	77302533
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07806	39.6	-	FEIE01	28	2284	2047	2/9/16	3/13/17	Scaffold	SC	SAMEA2383112	GCA_900021895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/895/GCA_900021895.1_12754_2_92	-	2842STDY5753657
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95082	52.1	-	CTBX01	103	5111	4816	3/24/15	2/27/17	Scaffold	SC	SAMEA773546	GCA_001215885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/885/GCA_001215885.1_5275_1_4	-	V15
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86916	32.7	-	FGLY01	50	3008	2817	2/10/16	3/5/17	Contig	SC	SAMEA1464411	GCA_900040305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/305/GCA_900040305.1_7521_5_81	-	st1446
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.9066	32.7	-	FGMF01	68	3070	2877	2/10/16	3/6/17	Contig	SC	SAMEA1464630	GCA_900040315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/315/GCA_900040315.1_7521_5_93	-	st1466
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.97159	52.1	-	CTAD01	96	5159	4876	3/24/15	2/27/17	Scaffold	SC	SAMEA1483988	GCA_001215925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/925/GCA_001215925.1_8036_3_66	-	SPAINa
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09488	39.6	-	FEJB01	29	2328	2098	2/9/16	3/5/17	Scaffold	SC	SAMEA2383135	GCA_900021905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/905/GCA_900021905.1_12754_3_20	-	2842STDY5753681
Escherichia coli	562	PRJNA260344	260344	Proteobacteria	Gammaproteobacteria	4.95174	50.5	-	JRGC01	397	5383	4777	9/16/14	2/23/17	Scaffold	University of Copenhagen	SAMN03020301	GCA_000754855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/855/GCA_000754855.1_ASM75485v1	-	77300132
Escherichia coli	562	PRJNA260344	260344	Proteobacteria	Gammaproteobacteria	5.279	50.4	-	JRGB01	387	5749	5212	9/16/14	2/23/17	Scaffold	University of Copenhagen	SAMN03020300	GCA_000754865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/865/GCA_000754865.1_ASM75486v1	-	77300095
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.14439	39.7	-	FEKS01	45	2373	2122	2/9/16	3/13/17	Scaffold	SC	SAMEA2383178	GCA_900021915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/915/GCA_900021915.1_12754_3_63	-	2842STDY5753724
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	5.01294	52	-	CTBK01	160	5213	4909	3/24/15	2/27/17	Scaffold	SC	SAMEA773503	GCA_001215985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/985/GCA_001215985.1_5275_5_6	-	V06
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86397	32.7	-	FGMK01	55	2982	2828	2/10/16	3/5/17	Contig	SC	SAMEA1464379	GCA_900040325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/325/GCA_900040325.1_7521_6_9	-	st1489
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81608	32.7	-	FGML01	61	2908	2762	2/10/16	3/5/17	Contig	SC	SAMEA1464396	GCA_900040335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/335/GCA_900040335.1_7521_6_7	-	st1484
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	5.03395	52	-	CTBB01	85	5248	4962	3/24/15	2/27/17	Scaffold	SC	SAMEA1521958	GCA_001216085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/085/GCA_001216085.1_8080_3_87	-	V107
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07305	39.7	-	FELH01	39	2262	2017	2/9/16	3/13/17	Scaffold	SC	SAMEA2383193	GCA_900021925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/925/GCA_900021925.1_12754_3_78	-	2842STDY5753739
Escherichia coli	562	PRJNA262132	262132	Proteobacteria	Gammaproteobacteria	5.31862	50.7	-	JRQF01	762	5630	5189	10/23/14	2/23/17	Scaffold	University of Copenhagen	SAMN03081275	GCA_000768125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/125/GCA_000768125.1_ASM76812v1	25540351	77.3025.33
Escherichia coli	562	PRJNA245870	245870	Proteobacteria	Gammaproteobacteria	5.23626	50.7	-	JPMZ01	185	5540	5099	10/24/14	2/23/17	Scaffold	"Technische Universitaet Dresden, Medical Faculty 'Carl Gustav Carus'"	SAMN02867352	GCA_000768465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/768/465/GCA_000768465.1_ASM76846v1	25745009	G6/7
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00432	39.8	-	FENV01	16	2235	1991	2/9/16	3/13/17	Scaffold	SC	SAMEA2383261	GCA_900021935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/021/935/GCA_900021935.1_12754_4_51	-	2842STDY5753808
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.92731	52.1	-	CTCG01	85	5111	4841	3/24/15	2/27/17	Scaffold	SC	SAMEA1484081	GCA_001216125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/125/GCA_001216125.1_8036_3_61	-	THAILAND
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77678	32.7	-	FGMX01	43	2839	2685	2/10/16	3/5/17	Contig	SC	SAMEA1464672	GCA_900040345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/345/GCA_900040345.1_7521_6_20	-	st1525
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.75061	32.7	-	FGND01	15	2861	2712	2/10/16	3/5/17	Contig	SC	SAMEA1464588	GCA_900040355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/355/GCA_900040355.1_7521_6_30	-	st1561
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.97045	52.1	-	CTAP01	105	5154	4881	3/24/15	2/27/17	Scaffold	SC	SAMEA1484011	GCA_001216205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/205/GCA_001216205.1_8036_3_76	-	MALTAa
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12055	39.6	-	FDQV01	36	2312	2075	2/9/16	3/12/17	Scaffold	SC	SAMEA2239146	GCA_900022135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/135/GCA_900022135.1_11860_8_12	-	2842STDY5644528
Escherichia coli	562	PRJNA252850	252850	Proteobacteria	Gammaproteobacteria	4.7126	50.7	-	JPIF01	189	4949	4605	11/7/14	2/23/17	Scaffold	Centers for Disease Control and Prevention	SAMN02863978	GCA_000773435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/435/GCA_000773435.1_ASM77343v1	25523765	2013EL-1319
Escherichia coli	562	PRJNA252850	252850	Proteobacteria	Gammaproteobacteria	5.16998	50.3	-	JPXL01	271	5594	5066	11/7/14	2/23/17	Scaffold	Centers for Disease Control and Prevention	SAMN02953901	GCA_000773475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/475/GCA_000773475.1_ASM77347v1	25523765	F5995
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99275	39.8	-	FDTD01	42	2194	1929	2/9/16	3/6/17	Scaffold	SC	SAMEA2239212	GCA_900022145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/145/GCA_900022145.1_11860_8_80	-	2842STDY5644594
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.98058	52.1	-	CTAQ01	82	5162	4882	3/24/15	2/27/17	Scaffold	SC	SAMEA1521964	GCA_001216345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/345/GCA_001216345.1_8080_3_30	-	H125
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.75262	32.7	-	FGNH01	49	2812	2669	2/10/16	3/5/17	Contig	SC	SAMEA1464483	GCA_900040365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/365/GCA_900040365.1_7521_6_36	-	st1583
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.78546	32.7	-	FGNO01	29	2866	2721	2/10/16	3/5/17	Contig	SC	SAMEA1464280	GCA_900040375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/375/GCA_900040375.1_8728_5_31	-	st1603
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97743	52.1	-	CTCJ01	85	5160	4880	3/24/15	2/27/17	Scaffold	SC	SAMEA1522021	GCA_001216385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/385/GCA_001216385.1_8080_3_44	-	H139
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08292	39.7	-	FDXA01	56	2304	2055	2/9/16	3/13/17	Scaffold	SC	SAMEA2238352	GCA_900022155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/155/GCA_900022155.1_11860_4_79	-	2842STDY5643721
Escherichia coli	562	PRJNA252850	252850	Proteobacteria	Gammaproteobacteria	4.87969	50.5	-	JPXK01	163	5180	4763	11/7/14	2/23/17	Scaffold	Centers for Disease Control and Prevention	SAMN02954154	GCA_000773535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/535/GCA_000773535.1_ASM77353v1	25523765	M9803
Escherichia coli	562	PRJNA252850	252850	Proteobacteria	Gammaproteobacteria	5.18506	50.3	-	JPXJ01	291	5609	5080	11/7/14	2/23/17	Scaffold	Centers for Disease Control and Prevention	SAMN02954280	GCA_000773555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/555/GCA_000773555.1_ASM77355v1	25523765	F6097
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98954	39.8	-	FDXC01	47	2188	1925	2/9/16	3/13/17	Scaffold	SC	SAMEA2238355	GCA_900022165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/165/GCA_900022165.1_11860_4_82	-	2842STDY5643724
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.99595	52.2	-	CTAM01	99	5160	4912	3/24/15	2/27/17	Scaffold	SC	SAMEA773509	GCA_001216425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/425/GCA_001216425.1_5275_7_7	-	V39
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82164	32.7	-	FGNY01	49	2916	2765	2/10/16	3/5/17	Contig	SC	SAMEA1464685	GCA_900040385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/385/GCA_900040385.1_7521_6_60	-	st1649
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84615	32.8	-	FGPC01	58	2996	2804	2/10/16	3/5/17	Contig	SC	SAMEA1464439	GCA_900040395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/395/GCA_900040395.1_7712_8_28	-	st698
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.96772	52.1	-	CTBC01	101	5153	4882	3/24/15	2/27/17	Scaffold	SC	SAMEA1483978	GCA_001216445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/445/GCA_001216445.1_8036_3_52	-	V120
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09901	39.6	-	FDXG01	37	2336	2073	2/9/16	3/13/17	Scaffold	SC	SAMEA2238359	GCA_900022175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/175/GCA_900022175.1_11822_8_30	-	2842STDY5643728
Escherichia coli	562	PRJNA252850	252850	Proteobacteria	Gammaproteobacteria	4.88177	50.6	-	JPXM01	239	5155	4721	11/7/14	2/23/17	Scaffold	Centers for Disease Control and Prevention	SAMN02954481	GCA_000773595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/773/595/GCA_000773595.1_ASM77359v1	25523765	2011EL-1251-4
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.21803	50.4	-	JSGJ01	96	5379	4998	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802175	GCA_000776035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/035/GCA_000776035.1_ASM77603v1	25373147	upec-80
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09151	39.6	-	FDXH01	31	2281	2052	2/9/16	3/8/17	Scaffold	SC	SAMEA2238361	GCA_900022185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/185/GCA_900022185.1_11860_4_87	-	2842STDY5643730
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.97229	52.1	-	CTAY01	84	5162	4887	3/24/15	2/27/17	Scaffold	SC	SAMEA1483992	GCA_001216465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/465/GCA_001216465.1_8036_3_69	-	SPAINh
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.91576	32.6	-	FGPD01	57	3069	2865	2/10/16	3/6/17	Contig	SC	SAMEA1464438	GCA_900040405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/405/GCA_900040405.1_7712_8_37	-	st718
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83053	32.7	-	FGQJ01	73	2933	2784	2/10/16	3/5/17	Contig	SC	SAMEA1469621	GCA_900040415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/415/GCA_900040415.1_7480_7_28	-	st1179
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.86447	52.1	-	CTAZ01	103	5009	4725	3/24/15	2/27/17	Scaffold	SC	SAMEA773560	GCA_001216485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/485/GCA_001216485.1_5275_2_12	-	V41
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11184	39.6	-	FDYA01	35	2317	2066	2/9/16	3/13/17	Scaffold	SC	SAMEA2238392	GCA_900022195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/195/GCA_900022195.1_11860_5_23	-	2842STDY5643762
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.68898	50.7	-	JSKJ01	64	4762	4433	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802053	GCA_000776045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/045/GCA_000776045.1_ASM77604v1	25373147	upec-23
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.07174	50.5	-	JSHB01	96	5247	4913	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802155	GCA_000776055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/055/GCA_000776055.1_ASM77605v1	25373147	upec-62
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12801	39.6	-	FDYB01	75	2378	2111	2/9/16	3/5/17	Scaffold	SC	SAMEA2238393	GCA_900022205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/205/GCA_900022205.1_11860_5_24	-	2842STDY5643763
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73152	52	-	CTAA01	46	4882	4532	3/24/15	2/27/17	Scaffold	SC	SAMEA2072890	GCA_001216505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/505/GCA_001216505.1_10349_1_2	-	ERL022463
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82973	32.7	-	FGQO01	62	2929	2782	2/10/16	3/6/17	Contig	SC	SAMEA1469714	GCA_900040425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/425/GCA_900040425.1_7480_7_52	-	st1251
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86069	32.7	-	FGQT01	71	2967	2817	2/10/16	3/5/17	Contig	SC	SAMEA1469658	GCA_900040435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/435/GCA_900040435.1_7480_7_73	-	st1299
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	5.07783	52.1	-	CTAV01	82	5291	5006	3/24/15	2/27/17	Scaffold	SC	SAMEA773636	GCA_001216545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/545/GCA_001216545.1_5285_6_8	-	H44
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05541	39.6	-	FDZV01	43	2237	1998	2/9/16	3/6/17	Scaffold	SC	SAMEA2238475	GCA_900022215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/215/GCA_900022215.1_11860_6_9	-	2842STDY5643846
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.90043	50.6	-	JSGM01	93	5071	4734	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802172	GCA_000776065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/065/GCA_000776065.1_ASM77606v1	25373147	upec-78
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.02396	50.7	-	JSHF01	43	5159	4858	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802150	GCA_000776115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/115/GCA_000776115.1_ASM77611v1	25373147	upec-58
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11618	39.6	-	FEAA01	54	2345	2073	2/9/16	3/6/17	Scaffold	SC	SAMEA2238482	GCA_900022225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/225/GCA_900022225.1_11860_6_15	-	2842STDY5643853
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.98506	52.1	-	CTCA01	81	5184	4897	3/24/15	2/27/17	Scaffold	SC	SAMEA1707604	GCA_001216565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/565/GCA_001216565.1_9066_1_6	-	EWH8
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80468	32.7	-	FGRW01	42	2892	2745	2/10/16	3/5/17	Contig	SC	SAMEA1464442	GCA_900040445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/445/GCA_900040445.1_7521_6_53	-	st1620
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81833	32.7	-	FGSN01	57	2913	2756	2/10/16	3/5/17	Contig	SC	SAMEA1464627	GCA_900040465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/465/GCA_900040465.1_7521_6_91	-	st1738
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.91801	52.1	-	CTBA01	101	5078	4807	3/24/15	2/27/17	Scaffold	SC	SAMEA773642	GCA_001216585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/585/GCA_001216585.1_5388_1_12	-	H36
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09445	39.6	-	FEAF01	40	2326	2071	2/9/16	3/12/17	Scaffold	SC	SAMEA2238491	GCA_900022235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/235/GCA_900022235.1_11860_6_24	-	2842STDY5643862
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.63832	50.7	-	JSGI01	108	4786	4413	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802176	GCA_000776135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/135/GCA_000776135.1_ASM77613v1	25373147	upec-81
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.37629	50.6	-	JSGN01	155	5698	5235	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802171	GCA_000776155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/155/GCA_000776155.1_ASM77615v1	25373147	upec-77
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99149	39.8	-	FEBF01	49	2184	1930	2/9/16	3/13/17	Scaffold	SC	SAMEA2238534	GCA_900022245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/245/GCA_900022245.1_11860_6_68	-	2842STDY5643905
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97092	52.1	-	CTBH01	104	5151	4884	3/24/15	2/27/17	Scaffold	SC	SAMEA773611	GCA_001216605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/605/GCA_001216605.1_5285_6_9	-	H45
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80214	32.7	-	FGSO01	67	2901	2752	2/10/16	3/5/17	Contig	SC	SAMEA1317587	GCA_900040475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/475/GCA_900040475.1_7469_7_4	-	st1750
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77463	32.7	-	FGSS01	53	2876	2725	2/10/16	3/6/17	Contig	SC	SAMEA1317403	GCA_900040485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/485/GCA_900040485.1_7469_7_7	-	st1778
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.88141	52.2	-	CTCB01	77	4997	4760	3/24/15	2/27/17	Scaffold	SC	SAMEA773601	GCA_001216645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/645/GCA_001216645.1_5275_3_11	-	H01
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98436	39.7	-	FEBU01	26	2177	1933	2/9/16	3/13/17	Scaffold	SC	SAMEA2238558	GCA_900022255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/255/GCA_900022255.1_11860_6_92	-	2842STDY5643929
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.14414	50.6	-	JSGV01	190	5371	4935	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802163	GCA_000776175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/175/GCA_000776175.1_ASM77617v1	25373147	upec-7
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.93683	50.6	-	JSGK01	70	5089	4810	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802174	GCA_000776195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/195/GCA_000776195.1_ASM77619v1	25373147	upec-8
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04785	39.6	-	FECT01	27	2260	2014	2/9/16	3/5/17	Scaffold	SC	SAMEA2238601	GCA_900022265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/265/GCA_900022265.1_11861_1_38	-	2842STDY5643973
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95143	52.1	-	CTAG01	111	5118	4869	3/24/15	2/27/17	Scaffold	SC	SAMEA773618	GCA_001216705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/705/GCA_001216705.1_5275_6_7	-	V26
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82919	32.7	-	FGSZ01	67	2932	2776	2/10/16	3/6/17	Contig	SC	SAMEA1317350	GCA_900040495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/495/GCA_900040495.1_7469_7_17	-	st1804
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81619	32.7	-	FGTI01	64	2917	2759	2/10/16	3/5/17	Contig	SC	SAMEA1317500	GCA_900040505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/505/GCA_900040505.1_7469_7_30	-	st1857
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.98052	52.1	-	CTAW01	87	5172	4893	3/24/15	2/27/17	Scaffold	SC	SAMEA1483996	GCA_001216765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/765/GCA_001216765.1_8036_3_82	-	SOUTH_AFRICA
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01391	39.8	-	FEDN01	17	2251	2008	2/9/16	3/13/17	Scaffold	SC	SAMEA2238637	GCA_900022275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/275/GCA_900022275.1_11861_1_75	-	2842STDY5644009
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.14063	50.4	-	JSGF01	152	5300	4912	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802179	GCA_000776215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/215/GCA_000776215.1_ASM77621v1	25373147	upec-84
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.03974	50.6	-	JSGO01	62	5202	4902	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802170	GCA_000776235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/235/GCA_000776235.1_ASM77623v1	25373147	upec-76
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98808	39.8	-	FEFG01	51	2188	1931	2/9/16	3/15/17	Scaffold	SC	SAMEA2238721	GCA_900022285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/285/GCA_900022285.1_11861_2_61	-	2842STDY5644094
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97922	52.1	-	CTBZ01	81	5158	4883	3/24/15	2/27/17	Scaffold	SC	SAMEA1521961	GCA_001216785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/785/GCA_001216785.1_8080_3_76	-	V96
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79538	32.7	-	FGTL01	68	2900	2744	2/10/16	3/5/17	Contig	SC	SAMEA1317396	GCA_900040515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/515/GCA_900040515.1_7469_7_33	-	st1891
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78536	32.7	-	FGTM01	53	2882	2727	2/10/16	3/5/17	Contig	SC	SAMEA1317338	GCA_900040525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/525/GCA_900040525.1_7469_7_35	-	st1899
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.93966	52.1	-	CTAB01	116	5109	4826	3/24/15	2/27/17	Scaffold	SC	SAMEA773602	GCA_001216845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/845/GCA_001216845.1_5299_3_8	-	V48
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05564	39.5	-	FCRG01	25	2265	2037	2/6/16	3/13/17	Scaffold	SC	SAMEA2239018	GCA_900022295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/295/GCA_900022295.1_11861_4_72	-	2842STDY5644396
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.04439	50.8	-	JSFQ01	139	5265	4830	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802195	GCA_000776255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/255/GCA_000776255.1_ASM77625v1	25373147	upec-99
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.99728	50.5	-	JSHG01	866	5785	4754	11/13/14	3/5/17	Scaffold	University of Washington	SAMN02802149	GCA_000776275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/275/GCA_000776275.1_ASM77627v1	25373147	upec-57
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13094	39.6	-	FCRN01	30	2381	2122	2/6/16	3/5/17	Scaffold	SC	SAMEA2239017	GCA_900022305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/305/GCA_900022305.1_11861_4_71	-	2842STDY5644395
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95455	52.1	-	CTBW01	92	5126	4867	3/24/15	2/27/17	Scaffold	SC	SAMEA773568	GCA_001216985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/216/985/GCA_001216985.1_5275_8_3	-	H62
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.7836	32.7	-	FGTQ01	57	2877	2732	2/10/16	3/6/17	Contig	SC	SAMEA1317534	GCA_900040535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/535/GCA_900040535.1_7469_7_42	-	st1924
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80111	32.7	-	FGTS01	41	2889	2741	2/10/16	3/5/17	Contig	SC	SAMEA1317546	GCA_900040545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/545/GCA_900040545.1_7469_7_44	-	st1927
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	5.04402	52.2	-	CTAT01	84	5212	4953	3/24/15	2/27/17	Scaffold	SC	SAMEA773531	GCA_001217025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/025/GCA_001217025.1_5275_8_11	-	H69
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07776	39.6	-	FCSR01	38	2309	2054	2/6/16	3/13/17	Scaffold	SC	SAMEA2239091	GCA_900022315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/315/GCA_900022315.1_11860_7_52	-	2842STDY5644472
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.89963	50.8	-	JSGH01	144	5078	4740	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802177	GCA_000776285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/285/GCA_000776285.1_ASM77628v1	25373147	upec-82
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.18886	50.6	-	JSFR01	65	5406	5086	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802194	GCA_000776315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/315/GCA_000776315.1_ASM77631v1	25373147	upec-98
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08521	39.6	-	FCTM01	30	2314	2054	2/6/16	3/15/17	Scaffold	SC	SAMEA2238797	GCA_900022325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/325/GCA_900022325.1_11893_1_40	-	2842STDY5644171
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.96606	52.1	-	CTCE01	79	5132	4872	3/24/15	2/27/17	Scaffold	SC	SAMEA773589	GCA_001217085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/085/GCA_001217085.1_5275_3_3	-	V59
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83425	32.7	-	FGTZ01	65	2931	2779	2/10/16	3/5/17	Contig	SC	SAMEA1317572	GCA_900040555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/555/GCA_900040555.1_7469_7_56	-	st1966
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.90892	32.7	-	FGUF01	51	3067	2892	2/10/16	3/5/17	Contig	SC	SAMEA1317427	GCA_900040565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/565/GCA_900040565.1_7469_7_65	-	st2007
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97427	52.1	-	CTAU01	74	5154	4878	3/24/15	2/27/17	Scaffold	SC	SAMEA1522036	GCA_001217205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/205/GCA_001217205.1_8080_3_61	-	V81
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98997	39.8	-	FDXI01	46	2198	1939	2/9/16	3/13/17	Scaffold	SC	SAMEA2238362	GCA_900022535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/535/GCA_900022535.1_11860_4_88	-	2842STDY5643731
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.41939	50.7	-	JSGW01	171	5718	5350	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802162	GCA_000776335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/335/GCA_000776335.1_ASM77633v1	25373147	upec-69
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.89264	50.6	-	JSGG01	123	5167	4808	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802178	GCA_000776355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/355/GCA_000776355.1_ASM77635v1	25373147	upec-83
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04946	39.6	-	FEEZ01	19	2259	2029	2/9/16	3/13/17	Scaffold	SC	SAMEA2238712	GCA_900022545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/545/GCA_900022545.1_11861_2_52	-	2842STDY5644085
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.96722	52.1	-	CTAF01	87	5150	4873	3/24/15	2/27/17	Scaffold	SC	SAMEA1521995	GCA_001217245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/245/GCA_001217245.1_8080_3_4	-	H99
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78919	32.7	-	FGUG01	48	2881	2728	2/10/16	3/5/17	Contig	SC	SAMEA1317335	GCA_900040575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/575/GCA_900040575.1_7469_7_67	-	st2040
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8308	32.7	-	FGUH01	41	2936	2785	2/10/16	3/5/17	Contig	SC	SAMEA1464512	GCA_900040585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/585/GCA_900040585.1_7564_8_11	-	st2014
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.94787	52.1	-	CTAL01	106	5125	4828	3/24/15	2/27/17	Scaffold	SC	SAMEA773565	GCA_001217265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/265/GCA_001217265.1_5299_3_3	-	V44
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12598	39.5	-	FDQQ01	39	2366	2127	2/9/16	3/13/17	Scaffold	SC	SAMEA2239126	GCA_900022735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/735/GCA_900022735.1_11860_7_87	-	2842STDY5644507
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.09312	50.5	-	JSGR01	72	5273	4955	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802167	GCA_000776375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/375/GCA_000776375.1_ASM77637v1	25373147	upec-73
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.31006	50.7	-	JSFS01	98	5568	5196	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802193	GCA_000776395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/395/GCA_000776395.1_ASM77639v1	25373147	upec-97
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08442	39.6	-	FDUW01	26	2275	2047	2/9/16	3/12/17	Scaffold	SC	SAMEA2239285	GCA_900022745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/745/GCA_900022745.1_11861_5_60	-	2842STDY5644669
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97216	52.1	-	CTAE01	80	5160	4875	3/24/15	2/27/17	Scaffold	SC	SAMEA1522046	GCA_001217305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/305/GCA_001217305.1_8080_3_24	-	H119
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78671	32.7	-	FGUM01	42	2871	2733	2/10/16	3/5/17	Contig	SC	SAMEA1317568	GCA_900040595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/595/GCA_900040595.1_7469_7_72	-	st2063
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83754	32.8	-	FGUP01	62	2952	2800	2/10/16	3/5/17	Contig	SC	SAMEA1317325	GCA_900040605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/605/GCA_900040605.1_7469_7_79	-	st2109
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95214	52.1	-	CTCI01	111	5113	4859	3/24/15	2/27/17	Scaffold	SC	SAMEA773619	GCA_001217345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/345/GCA_001217345.1_5275_6_8	-	H09
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1062	39.6	-	FDVB01	36	2314	2055	2/9/16	3/13/17	Scaffold	SC	SAMEA2239293	GCA_900022755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/755/GCA_900022755.1_11861_5_68	-	2842STDY5644677
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.25883	50.3	-	JSGL01	120	5473	5016	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802173	GCA_000776415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/415/GCA_000776415.1_ASM77641v1	25373147	upec-79
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.72453	50.6	-	JSFT01	63	4794	4499	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802191	GCA_000776435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/435/GCA_000776435.1_ASM77643v1	25373147	upec-95
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09984	39.6	-	FEDX01	47	2325	2064	2/9/16	3/13/17	Scaffold	SC	SAMEA2238660	GCA_900022765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/765/GCA_900022765.1_11861_1_94	-	2842STDY5644033
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95137	52.1	-	CTBV01	105	5131	4864	3/24/15	2/27/17	Scaffold	SC	SAMEA773554	GCA_001217385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/385/GCA_001217385.1_5285_7_11	-	H58
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83674	32.7	-	FFPA01	48	2933	2784	2/9/16	3/5/17	Contig	SC	SAMEA1464177	GCA_900040695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/695/GCA_900040695.1_7748_6_36	-	st2575
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.74487	32.7	-	FFYH01	12	2866	2711	2/10/16	3/6/17	Contig	SC	SAMEA1464236	GCA_900040725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/725/GCA_900040725.1_7748_6_4	-	st343
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.973	52.1	-	CTAS01	94	5156	4888	3/24/15	2/27/17	Scaffold	SC	SAMEA773635	GCA_001217425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/425/GCA_001217425.1_5285_6_7	-	H43
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07662	39.6	-	FCQA01	35	2289	2030	2/6/16	3/13/17	Scaffold	SC	SAMEA2238772	GCA_900022775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/775/GCA_900022775.1_11822_8_48	-	2842STDY5644146
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.16927	50.4	-	JSGE01	113	5320	4933	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802180	GCA_000776455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/455/GCA_000776455.1_ASM77645v1	25373147	upec-85
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.96203	50.5	-	JSGS01	872	5447	4855	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802166	GCA_000776475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/475/GCA_000776475.1_ASM77647v1	25373147	upec-72
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1199	39.6	-	FCQC01	24	2355	2120	2/6/16	3/5/17	Scaffold	SC	SAMEA2238776	GCA_900022785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/785/GCA_900022785.1_11893_1_19	-	2842STDY5644150
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.9644	52.1	-	CTBO01	58	5135	4876	3/24/15	2/27/17	Scaffold	SC	SAMEA773652	GCA_001217445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/445/GCA_001217445.1_5275_5_3	-	V03
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80075	32.7	-	FGBW01	39	2888	2741	2/10/16	3/5/17	Contig	SC	SAMEA1464402	GCA_900040735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/735/GCA_900040735.1_7712_8_35	-	st714
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82261	32.7	-	FGCB01	48	2919	2765	2/10/16	3/5/17	Contig	SC	SAMEA1464441	GCA_900040745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/745/GCA_900040745.1_7712_8_42	-	st752
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.96916	52.1	-	CTMH01	97	5154	4874	3/26/15	2/27/17	Scaffold	SC	SAMEA1483982	GCA_001217545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/545/GCA_001217545.1_8036_3_43	-	H151
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09032	39.6	-	FCRC01	37	2280	2041	2/6/16	3/6/17	Scaffold	SC	SAMEA2238994	GCA_900022795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/795/GCA_900022795.1_11861_4_48	-	2842STDY5644370
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.17043	50.5	-	JSHD01	102	5340	4960	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802153	GCA_000776505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/505/GCA_000776505.1_ASM77650v1	25373147	upec-60
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.20435	50.7	-	JSGB01	128	5442	5050	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802183	GCA_000776535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/535/GCA_000776535.1_ASM77653v1	25373147	upec-88
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05685	39.6	-	FCRL01	20	2267	2030	2/6/16	3/13/17	Scaffold	SC	SAMEA2239060	GCA_900022805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/805/GCA_900022805.1_11860_7_19	-	2842STDY5644440
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.93359	52.1	-	CTLI01	80	5110	4840	3/26/15	2/27/17	Scaffold	SC	SAMEA1483990	GCA_001217585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/585/GCA_001217585.1_8036_3_46	-	H154
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8282	32.7	-	FGGF01	62	2924	2779	2/10/16	3/6/17	Contig	SC	SAMEA1317372	GCA_900040755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/755/GCA_900040755.1_7414_8_57	-	st892
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78587	32.7	-	FGKH01	66	2872	2726	2/10/16	3/5/17	Contig	SC	SAMEA1469618	GCA_900040765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/765/GCA_900040765.1_7480_7_71	-	st1295
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	5.02747	52.2	-	CTNA01	110	5222	4954	3/26/15	2/27/17	Scaffold	SC	SAMEA773542	GCA_001217605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/605/GCA_001217605.1_5275_1_12	-	V25
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04597	39.7	-	FCTG01	36	2243	2001	2/6/16	3/15/17	Scaffold	SC	SAMEA2238789	GCA_900022815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/815/GCA_900022815.1_11893_1_32	-	2842STDY5644163
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.10149	50.7	-	JSHC01	97	5316	4981	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802154	GCA_000776565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/565/GCA_000776565.1_ASM77656v1	25373147	upec-61
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.84579	50.7	-	JSGQ01	114	5119	4693	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802168	GCA_000776595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/595/GCA_000776595.1_ASM77659v1	25373147	upec-74
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.9994	39.6	-	FCUY01	19	2196	1974	2/6/16	3/13/17	Scaffold	SC	SAMEA2238864	GCA_900022825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/825/GCA_900022825.1_11861_3_10	-	2842STDY5644239
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97795	52.1	-	CTLD01	79	5161	4870	3/26/15	2/27/17	Scaffold	SC	SAMEA1707606	GCA_001217625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/625/GCA_001217625.1_9065_1_11	-	EWV2
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.78835	32.7	-	FGNP01	22	2876	2729	2/10/16	3/6/17	Contig	SC	SAMEA1464297	GCA_900040775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/775/GCA_900040775.1_8728_5_30	-	st1600
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80421	32.7	-	FGNN01	38	2932	2750	2/10/16	3/5/17	Contig	SC	SAMEA1464265	GCA_900040785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/785/GCA_900040785.1_7521_6_49	-	st1608
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.98878	52.1	-	CTFZ01	70	5178	4868	3/26/15	2/27/17	Scaffold	SC	SAMEA1707611	GCA_001217665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/665/GCA_001217665.1_9065_1_8	-	EWV11
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05884	39.5	-	FCVE01	36	2279	2031	2/6/16	3/13/17	Scaffold	SC	SAMEA2238871	GCA_900022835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/835/GCA_900022835.1_11861_3_17	-	2842STDY5644246
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.2661	50.3	-	JSGZ01	98	5473	5134	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802158	GCA_000776615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/615/GCA_000776615.1_ASM77661v1	25373147	upec-65
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.90592	50.7	-	JSGA01	42	5046	4780	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802184	GCA_000776635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/635/GCA_000776635.1_ASM77663v1	25373147	upec-89
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11234	39.7	-	FCVG01	53	2304	2079	2/6/16	3/13/17	Scaffold	SC	SAMEA2238872	GCA_900022845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/845/GCA_900022845.1_11861_3_18	-	2842STDY5644247
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.96725	52.1	-	CTQH01	94	5156	4875	3/26/15	2/27/17	Scaffold	SC	SAMEA1484082	GCA_001217705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/705/GCA_001217705.1_8036_3_62	-	MOROCCO
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78823	32.7	-	FGNR01	36	2875	2727	2/10/16	3/6/17	Contig	SC	SAMEA1464365	GCA_900040795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/795/GCA_900040795.1_7521_6_51	-	st1613
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78155	32.7	-	FGOH01	46	2862	2715	2/10/16	3/5/17	Contig	SC	SAMEA1464389	GCA_900040805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/805/GCA_900040805.1_7521_6_74	-	st1691
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.94146	52.1	-	CTMW01	106	5095	4848	3/26/15	2/27/17	Scaffold	SC	SAMEA773507	GCA_001217765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/765/GCA_001217765.1_5295_2_2	-	H72
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00142	39.6	-	FCWW01	27	2191	1980	2/6/16	3/13/17	Scaffold	SC	SAMEA2382570	GCA_900022855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/855/GCA_900022855.1_12673_6_25	-	2842STDY5753110
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.14507	50.6	-	JSGP01	68	5362	5052	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802169	GCA_000776655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/655/GCA_000776655.1_ASM77665v1	25373147	upec-75
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.6303	50.7	-	JSHE01	30	4695	4478	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802151	GCA_000776675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/675/GCA_000776675.1_ASM77667v1	25373147	upec-59
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12814	39.6	-	FCXE01	51	2352	2141	2/6/16	3/13/17	Scaffold	SC	SAMEA2382579	GCA_900022865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/865/GCA_900022865.1_12673_6_34	-	2842STDY5753119
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97294	52.1	-	CTLK01	89	5159	4882	3/26/15	2/27/17	Scaffold	SC	SAMEA1522009	GCA_001217785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/785/GCA_001217785.1_8080_3_47	-	H142
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80393	32.7	-	FGOJ01	34	2900	2771	2/10/16	3/5/17	Contig	SC	SAMEA1317462	GCA_900040815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/815/GCA_900040815.1_7414_7_16	-	st45
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81584	32.7	-	FGOK01	59	2909	2765	2/10/16	3/5/17	Contig	SC	SAMEA1317566	GCA_900040825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/825/GCA_900040825.1_7414_7_34	-	st83
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95836	52.1	-	CTIG01	94	5126	4872	3/26/15	2/27/17	Scaffold	SC	SAMEA773580	GCA_001217825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/825/GCA_001217825.1_5275_2_4	-	V31
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.18178	39.6	-	FCXK01	49	2397	2150	2/6/16	3/13/17	Scaffold	SC	SAMEA2238952	GCA_900022875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/875/GCA_900022875.1_11861_4_3	-	2842STDY5644328
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.11767	50.4	-	JSFV01	203	5320	4910	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802189	GCA_000776695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/695/GCA_000776695.1_ASM77669v1	25373147	upec-93
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.17144	50.5	-	JSKK01	90	5286	4936	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802052	GCA_000776715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/715/GCA_000776715.1_ASM77671v1	25373147	upec-229
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00244	39.7	-	FCXM01	36	2229	1978	2/6/16	3/13/17	Scaffold	SC	SAMEA2238953	GCA_900022885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/885/GCA_900022885.1_11861_4_4	-	2842STDY5644329
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.96885	52.1	-	CTNR01	79	5152	4872	3/26/15	2/27/17	Scaffold	SC	SAMEA1521986	GCA_001217845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/845/GCA_001217845.1_8080_3_71	-	V91
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.9063	32.7	-	FGOQ01	48	3063	2885	2/10/16	3/5/17	Contig	SC	SAMEA1464591	GCA_900040835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/835/GCA_900040835.1_7554_6_51	-	st233
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83164	32.7	-	FGOW01	55	2926	2777	2/10/16	3/5/17	Contig	SC	SAMEA1317318	GCA_900040845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/845/GCA_900040845.1_7414_8_1	-	st501
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97713	52.1	-	CTGK01	91	5161	4880	3/26/15	2/27/17	Scaffold	SC	SAMEA1522037	GCA_001217865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/865/GCA_001217865.1_8080_3_17	-	H112
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13696	39.7	-	FCZF01	50	2382	2122	2/6/16	3/13/17	Scaffold	SC	SAMEA2674631	GCA_900022895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/895/GCA_900022895.1_14412_3_9	-	2842STDY5881891
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.26192	50.6	-	JSHH01	128	5529	5224	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802148	GCA_000776775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/775/GCA_000776775.1_ASM77677v1	25373147	upec-56
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.92383	50.6	-	JSGU01	54	5038	4771	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802164	GCA_000776815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/815/GCA_000776815.1_ASM77681v1	25373147	upec-70
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.14974	39.6	-	FDAK01	42	2391	2132	2/6/16	3/13/17	Scaffold	SC	SAMEA2382622	GCA_900022905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/905/GCA_900022905.1_12673_6_77	-	2842STDY5753162
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.96815	52.1	-	CTJO01	95	5153	4873	3/26/15	2/27/17	Scaffold	SC	SAMEA1707602	GCA_001217885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/885/GCA_001217885.1_9066_1_11	-	EWV4
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.97197	32.6	-	FGOY01	56	3126	2940	2/10/16	3/5/17	Contig	SC	SAMEA1464412	GCA_900040855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/855/GCA_900040855.1_7564_8_4	-	st558
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78504	32.7	-	FGOZ01	45	2859	2718	2/10/16	3/5/17	Contig	SC	SAMEA1464407	GCA_900040865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/865/GCA_900040865.1_7564_8_5	-	st577
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.96198	52.1	-	CTJK01	108	5134	4871	3/26/15	2/27/17	Scaffold	SC	SAMEA773513	GCA_001217905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/905/GCA_001217905.1_5275_7_3	-	H16
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99881	39.6	-	FDAP01	21	2198	1979	2/6/16	3/13/17	Scaffold	SC	SAMEA2382626	GCA_900022915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/915/GCA_900022915.1_12673_6_81	-	2842STDY5753166
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.69063	50.7	-	JSHI01	185	4936	4437	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802147	GCA_000776915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/915/GCA_000776915.1_ASM77691v1	25373147	upec-55
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.35509	50.2	-	JSHK01	531	5894	5200	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802145	GCA_000776935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/935/GCA_000776935.1_ASM77693v1	25373147	upec-53
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.03313	39.6	-	FDBB01	41	2237	2001	2/6/16	3/13/17	Scaffold	SC	SAMEA2382638	GCA_900022925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/925/GCA_900022925.1_12673_6_93	-	2842STDY5753178
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.99304	52.1	-	CTPO01	71	5179	4886	3/26/15	2/27/17	Scaffold	SC	SAMEA1707615	GCA_001217925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/925/GCA_001217925.1_9065_1_6	-	EWH7
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8367	32.7	-	FGPF01	43	2935	2787	2/10/16	3/5/17	Contig	SC	SAMEA1464643	GCA_900040875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/875/GCA_900040875.1_7712_8_62	-	st799
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.90207	32.7	-	FGPI01	92	3085	2911	2/10/16	3/5/17	Contig	SC	SAMEA1464671	GCA_900040885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/885/GCA_900040885.1_7564_8_7	-	st859
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.9873	52.1	-	CTLM01	77	5192	4886	3/26/15	2/27/17	Scaffold	SC	SAMEA1707613	GCA_001217965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/965/GCA_001217965.1_9066_1_4	-	EWH6
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04112	39.7	-	FDBC01	20	2278	2036	2/6/16	3/12/17	Scaffold	SC	SAMEA2382639	GCA_900022935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/935/GCA_900022935.1_12673_6_94	-	2842STDY5753179
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.33365	50.5	-	JSLC01	88	5585	5209	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802030	GCA_000778465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/465/GCA_000778465.1_ASM77846v1	25373147	upec-209
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.09291	50.7	-	JSLA01	90	5259	4939	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802034	GCA_000778475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/475/GCA_000778475.1_ASM77847v1	25373147	upec-212
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.19075	39.6	-	FDEC01	39	2425	2180	2/6/16	3/8/17	Scaffold	SC	SAMEA2382719	GCA_900022945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/945/GCA_900022945.1_12673_7_79	-	2842STDY5753260
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97784	52.1	-	CTHM01	81	5158	4888	3/26/15	2/27/17	Scaffold	SC	SAMEA1522041	GCA_001217985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/217/985/GCA_001217985.1_8080_3_89	-	V109
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78371	32.7	-	FGPM01	48	2874	2726	2/10/16	3/5/17	Contig	SC	SAMEA1317369	GCA_900040895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/895/GCA_900040895.1_7414_8_64	-	st907
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82594	32.7	-	FGPL01	57	2921	2777	2/10/16	3/5/17	Contig	SC	SAMEA1317331	GCA_900040905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/905/GCA_900040905.1_7414_8_70	-	st924
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.98044	52.1	-	CTLE01	82	5169	4889	3/26/15	2/27/17	Scaffold	SC	SAMEA1522044	GCA_001218025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/025/GCA_001218025.1_8080_3_49	-	V69
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10358	39.6	-	FDEO01	56	2332	2074	2/6/16	3/13/17	Scaffold	SC	SAMEA2382730	GCA_900022955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/955/GCA_900022955.1_12673_7_90	-	2842STDY5753271
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.10509	50.6	-	JSLE01	116	5336	5016	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802028	GCA_000778485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/485/GCA_000778485.1_ASM77848v1	25373147	upec-207
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.90528	50.7	-	JSLG01	54	5005	4725	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802026	GCA_000778545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/545/GCA_000778545.1_ASM77854v1	25373147	upec-205
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07737	39.6	-	FDEY01	41	2277	2046	2/6/16	3/6/17	Scaffold	SC	SAMEA2382740	GCA_900022965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/965/GCA_900022965.1_12718_4_5	-	2842STDY5753282
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97591	52.1	-	CTII01	82	5160	4886	3/26/15	2/27/17	Scaffold	SC	SAMEA1522004	GCA_001218065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/065/GCA_001218065.1_8080_3_2	-	H97
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.74708	32.7	-	FGPO01	52	2810	2665	2/10/16	3/5/17	Contig	SC	SAMEA1317317	GCA_900040915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/915/GCA_900040915.1_7414_8_73	-	st930
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.91041	32.6	-	FGPR01	80	3036	2877	2/10/16	3/5/17	Contig	SC	SAMEA1464207	GCA_900040925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/925/GCA_900040925.1_7521_5_3	-	st983
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95943	52.1	-	CTMC01	88	5130	4867	3/26/15	2/27/17	Scaffold	SC	SAMEA773508	GCA_001218085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/085/GCA_001218085.1_5275_7_8	-	H19
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06127	39.6	-	FDFL01	29	2279	2041	2/6/16	3/13/17	Scaffold	SC	SAMEA2382753	GCA_900022975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/975/GCA_900022975.1_12718_4_18	-	2842STDY5753295
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.79665	50.6	-	JSLD01	36	4936	4695	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802029	GCA_000778565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/565/GCA_000778565.1_ASM77856v1	25373147	upec-208
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.27696	50.6	-	JSLB01	117	5393	5069	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802033	GCA_000778585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/585/GCA_000778585.1_ASM77858v1	25373147	upec-211
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.17784	39.5	-	FDFR01	27	2422	2166	2/6/16	3/13/17	Scaffold	SC	SAMEA2382759	GCA_900022985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/985/GCA_900022985.1_12718_4_24	-	2842STDY5753301
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.9745	52.1	-	CTJS01	88	5158	4881	3/26/15	2/27/17	Scaffold	SC	SAMEA773637	GCA_001218105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/105/GCA_001218105.1_5285_6_3	-	H39
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78319	32.7	-	FGQG01	50	2865	2729	2/10/16	3/5/17	Contig	SC	SAMEA1469617	GCA_900040935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/935/GCA_900040935.1_7480_7_16	-	st1145
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8207	32.7	-	FGQK01	64	2927	2778	2/10/16	3/6/17	Contig	SC	SAMEA1469580	GCA_900040945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/945/GCA_900040945.1_7480_7_34	-	st1197
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.94791	52.1	-	CTLH01	114	5106	4841	3/26/15	2/27/17	Scaffold	SC	SAMEA773649	GCA_001218125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/125/GCA_001218125.1_5295_2_3	-	H73
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11122	39.7	-	FDGN01	35	2337	2098	2/6/16	3/13/17	Scaffold	SC	SAMEA2382781	GCA_900022995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/995/GCA_900022995.1_12718_4_46	-	2842STDY5753323
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.80969	50.9	-	JSPX01	99	4970	4676	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801886	GCA_000778745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/745/GCA_000778745.1_ASM77874v1	25373147	blood-10-1362
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.57272	50.3	-	JSPY01	91	5887	5467	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801885	GCA_000778765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/765/GCA_000778765.1_ASM77876v1	25373147	blood-10-1310
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10852	39.6	-	FDHG01	44	2317	2065	2/6/16	3/12/17	Scaffold	SC	SAMEA2382800	GCA_900023005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/005/GCA_900023005.1_12718_4_65	-	2842STDY5753342
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95655	52.1	-	CTMD01	87	5134	4874	3/26/15	2/27/17	Scaffold	SC	SAMEA773541	GCA_001218145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/145/GCA_001218145.1_5295_2_12	-	H81
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79588	32.7	-	FGQL01	73	2889	2747	2/10/16	3/5/17	Contig	SC	SAMEA1469586	GCA_900040955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/955/GCA_900040955.1_7480_7_37	-	st1207
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83436	32.7	-	FGQS01	75	2933	2782	2/10/16	3/5/17	Contig	SC	SAMEA1469660	GCA_900040965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/965/GCA_900040965.1_7480_7_70	-	st1293
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97459	52.1	-	CTKI01	83	5148	4879	3/26/15	2/27/17	Scaffold	SC	SAMEA1521963	GCA_001218225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/225/GCA_001218225.1_8080_3_95	-	H143
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06424	39.6	-	FDHR01	13	2284	2055	2/6/16	3/13/17	Scaffold	SC	SAMEA2382811	GCA_900023015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/015/GCA_900023015.1_12718_4_76	-	2842STDY5753353
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.95347	50.5	-	JSKZ01	63	4941	4686	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802035	GCA_000778785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/785/GCA_000778785.1_ASM77878v1	25373147	upec-213
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.46408	50.3	-	JSPZ01	152	5797	5406	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801884	GCA_000778915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/915/GCA_000778915.1_ASM77891v1	25373147	blood-10-1308
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13254	39.6	-	FDHU01	39	2338	2122	2/6/16	3/5/17	Scaffold	SC	SAMEA2382814	GCA_900023025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/025/GCA_900023025.1_12718_4_79	-	2842STDY5753356
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.96446	52.1	-	CTKB01	77	5136	4868	3/26/15	2/27/17	Scaffold	SC	SAMEA1707612	GCA_001218245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/245/GCA_001218245.1_9065_1_7	-	EWH12
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79505	32.7	-	FGQU01	70	2886	2740	2/10/16	3/5/17	Contig	SC	SAMEA1469652	GCA_900040975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/975/GCA_900040975.1_7480_7_79	-	st1312
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.89606	32.7	-	FGRA01	100	3083	2884	2/10/16	3/6/17	Contig	SC	SAMEA1464304	GCA_900040985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/985/GCA_900040985.1_7521_5_51	-	st1363
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.97655	52.1	-	CTOO01	97	5156	4881	3/26/15	2/27/17	Scaffold	SC	SAMEA1484006	GCA_001218265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/265/GCA_001218265.1_8036_3_79	-	MALTAd
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07417	39.7	-	FDJP01	63	2299	2042	2/6/16	3/13/17	Scaffold	SC	SAMEA2382867	GCA_900023035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/035/GCA_900023035.1_12718_5_37	-	2842STDY5753410
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.79195	50.9	-	JSQA01	96	4939	4664	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801883	GCA_000778965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/965/GCA_000778965.1_ASM77896v1	25373147	blood-10-1227
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.88617	50.7	-	JSQE01	90	5084	4737	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801879	GCA_000779005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/005/GCA_000779005.1_ASM77900v1	25373147	blood-10-1009
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08897	39.6	-	FDJX01	24	2300	2068	2/6/16	3/12/17	Scaffold	SC	SAMEA2382876	GCA_900023045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/045/GCA_900023045.1_12718_5_46	-	2842STDY5753419
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.96329	52.1	-	CTGW01	146	5131	4869	3/26/15	2/27/17	Scaffold	SC	SAMEA773608	GCA_001218285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/285/GCA_001218285.1_5285_6_12	-	H48
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80033	32.7	-	FGRK01	54	2894	2738	2/10/16	3/5/17	Contig	SC	SAMEA1464534	GCA_900041005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/005/GCA_900041005.1_7521_5_94	-	st1469
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78966	32.7	-	FGRV01	51	2883	2731	2/10/16	3/5/17	Contig	SC	SAMEA1464493	GCA_900041015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/015/GCA_900041015.1_7521_6_44	-	st1599
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.94951	52.1	-	CTGX01	107	5122	4848	3/26/15	2/27/17	Scaffold	SC	SAMEA773627	GCA_001218305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/305/GCA_001218305.1_5299_6_3	-	H86
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06558	39.5	-	FDJZ01	42	2269	2022	2/6/16	3/13/17	Scaffold	SC	SAMEA2382878	GCA_900023055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/055/GCA_900023055.1_12718_5_48	-	2842STDY5753421
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.35668	50.6	-	JSQD01	122	5625	5221	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801880	GCA_000779025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/025/GCA_000779025.1_ASM77902v1	25373147	blood-10-1105
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.7989	50.6	-	JSOZ01	26	4933	4678	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801911	GCA_000779055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/055/GCA_000779055.1_ASM77905v1	25373147	upec-101
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1022	39.7	-	FDKB01	33	2324	2085	2/6/16	3/8/17	Scaffold	SC	SAMEA2382880	GCA_900023065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/065/GCA_900023065.1_12718_5_50	-	2842STDY5753423
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.9565	52.1	-	CTHN01	97	5132	4857	3/26/15	2/27/17	Scaffold	SC	SAMEA773520	GCA_001218325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/325/GCA_001218325.1_5388_1_5	-	H30
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83166	32.7	-	FGRU01	49	2927	2779	2/10/16	3/5/17	Contig	SC	SAMEA1464444	GCA_900041025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/025/GCA_900041025.1_7521_6_47	-	st1604
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.74489	32.7	-	FGRZ01	42	2799	2650	2/10/16	3/5/17	Contig	SC	SAMEA1464713	GCA_900041035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/035/GCA_900041035.1_7521_6_61	-	st1654
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.87133	52.1	-	CTMP01	74	5017	4754	3/26/15	2/27/17	Scaffold	SC	SAMEA1521980	GCA_001218345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/345/GCA_001218345.1_8080_3_25	-	H120
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05117	39.8	-	FDKI01	30	2287	2050	2/6/16	3/5/17	Scaffold	SC	SAMEA2382887	GCA_900023075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/075/GCA_900023075.1_12718_5_57	-	2842STDY5753430
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.44973	50.6	-	JSPM01	118	5694	5309	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801897	GCA_000779075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/075/GCA_000779075.1_ASM77907v1	25373147	blood-2011-0141
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.64156	50.6	-	JSPE01	165	5973	5450	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801905	GCA_000779095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/095/GCA_000779095.1_ASM77909v1	25373147	blood-90544
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12487	39.6	-	FDKJ01	45	2375	2107	2/6/16	3/13/17	Scaffold	SC	SAMEA2382888	GCA_900023085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/085/GCA_900023085.1_12718_5_58	-	2842STDY5753431
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.98104	52.1	-	CTOE01	79	5159	4892	3/26/15	2/27/17	Scaffold	SC	SAMEA1522030	GCA_001218365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/365/GCA_001218365.1_8080_3_34	-	H129
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87012	32.7	-	FGST01	73	2983	2832	2/10/16	3/5/17	Contig	SC	SAMEA1317420	GCA_900041045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/045/GCA_900041045.1_7469_7_8	-	st1780
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79269	32.7	-	FGTB01	55	2920	2738	2/10/16	3/5/17	Contig	SC	SAMEA1317307	GCA_900041055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/055/GCA_900041055.1_7469_7_19	-	st1817
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.96368	52.1	-	CTHX01	126	5135	4847	3/26/15	2/27/17	Scaffold	SC	SAMEA773564	GCA_001218385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/385/GCA_001218385.1_5299_3_4	-	V45
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99307	39.8	-	FDMW01	50	2189	1927	2/6/16	3/13/17	Scaffold	SC	SAMEA2382956	GCA_900023095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/095/GCA_900023095.1_12754_1_31	-	2842STDY5753500
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.35861	50.6	-	JSQC01	131	5626	5220	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02801881	GCA_000779125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/125/GCA_000779125.1_ASM77912v1	25373147	blood-10-1126
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.04477	50.7	-	JSPG01	100	5303	4908	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801903	GCA_000779155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/155/GCA_000779155.1_ASM77915v1	25373147	blood-90187
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98963	39.8	-	FDNH01	48	2197	1936	2/6/16	3/8/17	Scaffold	SC	SAMEA2382967	GCA_900023105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/105/GCA_900023105.1_12754_1_42	-	2842STDY5753511
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.96557	52.1	-	CTPM01	127	5145	4861	3/26/15	2/27/17	Scaffold	SC	SAMEA773634	GCA_001218405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/405/GCA_001218405.1_5299_6_12	-	H95
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.73647	32.7	-	FGTF01	23	2809	2695	2/10/16	3/5/17	Contig	SC	SAMEA1317405	GCA_900041065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/065/GCA_900041065.1_7469_7_25	-	st1827
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83671	32.7	-	FGTK01	70	2943	2788	2/10/16	3/5/17	Contig	SC	SAMEA1317574	GCA_900041075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/075/GCA_900041075.1_7469_7_28	-	st1836
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97982	52.1	-	CTPZ01	80	5158	4882	3/26/15	2/27/17	Scaffold	SC	SAMEA1521962	GCA_001218425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/425/GCA_001218425.1_8080_3_41	-	H136
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10961	39.6	-	FDOF01	29	2324	2082	2/6/16	3/13/17	Scaffold	SC	SAMEA2382993	GCA_900023115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/115/GCA_900023115.1_12754_1_68	-	2842STDY5753537
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.88119	50.9	-	JSQB01	88	5040	4738	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801882	GCA_000779175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/175/GCA_000779175.1_ASM77917v1	25373147	blood-10-1215
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.69988	50.4	-	JSPA01	65	4831	4519	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801910	GCA_000779215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/215/GCA_000779215.1_ASM77921v1	25373147	upec-100
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98823	39.8	-	FDOG01	51	2196	1925	2/6/16	3/13/17	Scaffold	SC	SAMEA2382994	GCA_900023125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/125/GCA_900023125.1_12754_1_69	-	2842STDY5753538
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97918	52.1	-	CTLS01	72	5163	4873	3/26/15	2/27/17	Scaffold	SC	SAMEA1707605	GCA_001218445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/445/GCA_001218445.1_9066_1_5	-	EWH9
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8252	32.6	-	FGTH01	20	2967	2803	2/10/16	3/5/17	Contig	SC	SAMEA1464245	GCA_900041085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/085/GCA_900041085.1_7748_6_27	-	st1854
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84664	32.7	-	FGTN01	60	2964	2813	2/10/16	3/5/17	Contig	SC	SAMEA1317305	GCA_900041095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/095/GCA_900041095.1_7469_7_36	-	st1903
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97782	52.1	-	CTPF01	77	5167	4884	3/26/15	2/27/17	Scaffold	SC	SAMEA1521954	GCA_001218465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/465/GCA_001218465.1_8080_3_8	-	H103
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12264	39.6	-	FDPV01	30	2308	2080	2/9/16	3/13/17	Scaffold	SC	SAMEA2383037	GCA_900023135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/135/GCA_900023135.1_12754_2_17	-	2842STDY5753582
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.34403	50.7	-	JSPN01	118	5668	5260	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801896	GCA_000779265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/265/GCA_000779265.1_ASM77926v1	25373147	blood-11-0254
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.46648	50.6	-	JSPI01	125	5764	5284	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801901	GCA_000779275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/275/GCA_000779275.1_ASM77927v1	25373147	blood-9-0292
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01606	39.7	-	FEGI01	23	2243	2009	2/9/16	3/8/17	Scaffold	SC	SAMEA2383064	GCA_900023145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/145/GCA_900023145.1_12754_2_44	-	2842STDY5753609
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	5.04247	52.1	-	CTHJ01	85	5243	4970	3/26/15	2/27/17	Scaffold	SC	SAMEA773558	GCA_001218505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/505/GCA_001218505.1_5285_7_7	-	V54
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86382	32.7	-	FGTO01	72	3002	2828	2/10/16	3/5/17	Contig	SC	SAMEA1317354	GCA_900041105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/105/GCA_900041105.1_7469_7_39	-	st1912
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.83714	32.8	-	FGTR01	31	2944	2793	2/10/16	3/5/17	Contig	SC	SAMEA1317485	GCA_900041115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/115/GCA_900041115.1_8728_5_32	-	st1928
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95062	52.1	-	CTNV01	97	5125	4861	3/26/15	2/27/17	Scaffold	SC	SAMEA773522	GCA_001218545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/545/GCA_001218545.1_5388_1_3	-	H28
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99033	39.8	-	FEGN01	56	2191	1927	2/9/16	3/13/17	Scaffold	SC	SAMEA2383069	GCA_900023155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/155/GCA_900023155.1_12754_2_49	-	2842STDY5753614
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.55302	50.5	-	JSPF01	163	5890	5362	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801904	GCA_000779365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/365/GCA_000779365.1_ASM77936v1	25373147	blood-90543
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.02953	50.5	-	JSLP01	51	5178	4912	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802016	GCA_000779425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/425/GCA_000779425.1_ASM77942v1	25373147	upec-197
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05499	39.6	-	FEIN01	21	2273	2038	2/9/16	3/13/17	Scaffold	SC	SAMEA2383121	GCA_900023165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/165/GCA_900023165.1_12754_3_6	-	2842STDY5753667
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97699	52.1	-	CTLJ01	88	5154	4880	3/26/15	2/27/17	Scaffold	SC	SAMEA1522039	GCA_001218565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/565/GCA_001218565.1_8080_3_66	-	V86
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83489	32.7	-	FGTU01	49	2932	2779	2/10/16	3/5/17	Contig	SC	SAMEA1317421	GCA_900041125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/125/GCA_900041125.1_7469_7_48	-	st1934
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80155	32.7	-	FGUA01	42	2897	2746	2/10/16	3/5/17	Contig	SC	SAMEA1317554	GCA_900041135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/135/GCA_900041135.1_7469_7_57	-	st1971
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.96093	52.1	-	CTPB01	118	5137	4867	3/26/15	2/27/17	Scaffold	SC	SAMEA773641	GCA_001218585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/585/GCA_001218585.1_5388_1_11	-	H35
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09301	39.6	-	FEJA01	42	2262	2048	2/9/16	3/13/17	Scaffold	SC	SAMEA2383134	GCA_900023175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/175/GCA_900023175.1_12754_3_19	-	2842STDY5753680
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.1432	50.3	-	JSPW01	331	5477	4869	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801887	GCA_000779455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/455/GCA_000779455.1_ASM77945v1	25373147	blood-10-1365
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.03557	50.6	-	JSPQ01	233	5266	4847	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801893	GCA_000779495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/495/GCA_000779495.1_ASM77949v1	25373147	blood-11-0041
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15265	39.6	-	FEJV01	50	2404	2148	2/9/16	3/12/17	Scaffold	SC	SAMEA2383155	GCA_900023185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/185/GCA_900023185.1_12754_3_40	-	2842STDY5753701
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.87565	52.2	-	CTLX01	68	4984	4759	3/26/15	2/27/17	Scaffold	SC	SAMEA773543	GCA_001218605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/605/GCA_001218605.1_5275_1_11	-	V22
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.90947	32.7	-	FGUE01	53	3067	2894	2/10/16	3/5/17	Contig	SC	SAMEA1317460	GCA_900041145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/145/GCA_900041145.1_7469_7_63	-	st2002
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85023	32.6	-	FGUI01	65	2960	2801	2/10/16	3/6/17	Contig	SC	SAMEA1317347	GCA_900041155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/155/GCA_900041155.1_7469_7_68	-	st2044
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.87863	52.1	-	CTNJ01	67	5009	4728	3/26/15	2/27/17	Scaffold	SC	SAMEA773594	GCA_001218625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/625/GCA_001218625.1_5299_6_2	-	H83
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.14242	39.6	-	FEJW01	59	2355	2096	2/9/16	3/13/17	Scaffold	SC	SAMEA2383156	GCA_900023195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/195/GCA_900023195.1_12754_3_41	-	2842STDY5753702
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.78595	50.5	-	JSLR01	53	4866	4615	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802014	GCA_000779515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/515/GCA_000779515.1_ASM77951v1	25373147	upec-195
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.31526	50.4	-	JSLT01	141	5537	5097	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802012	GCA_000779545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/545/GCA_000779545.1_ASM77954v1	25373147	upec-193
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99364	39.8	-	FEKO01	51	2186	1920	2/9/16	3/13/17	Scaffold	SC	SAMEA2383174	GCA_900023205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/205/GCA_900023205.1_12754_3_59	-	2842STDY5753720
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.96303	52.1	-	CTGZ01	118	5140	4852	3/26/15	2/27/17	Scaffold	SC	SAMEA773566	GCA_001218685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/685/GCA_001218685.1_5299_3_6	-	V47
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.94219	32.7	-	FGUJ01	61	3098	2908	2/10/16	3/5/17	Contig	SC	SAMEA1317378	GCA_900041165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/165/GCA_900041165.1_7469_7_69	-	st2046
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86624	32.7	-	FGUL01	80	2981	2830	2/10/16	3/5/17	Contig	SC	SAMEA1317584	GCA_900041175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/175/GCA_900041175.1_7469_7_71	-	st2060
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95707	52.1	-	CTQK01	87	5121	4867	3/26/15	2/27/17	Scaffold	SC	SAMEA773590	GCA_001218725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/725/GCA_001218725.1_5275_3_4	-	V60
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.96657	39.8	-	FELG01	23	2188	1941	2/9/16	3/6/17	Scaffold	SC	SAMEA2383192	GCA_900023215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/215/GCA_900023215.1_12754_3_77	-	2842STDY5753738
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.83923	50.8	-	JSLU01	700	5487	4666	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802007	GCA_000779565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/565/GCA_000779565.1_ASM77956v1	25373147	upec-189
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.06501	50.4	-	JSLX01	90	5206	4883	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802004	GCA_000779585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/585/GCA_000779585.1_ASM77958v1	25373147	upec-186
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.9916	39.8	-	FEMJ01	50	2197	1936	2/9/16	3/15/17	Scaffold	SC	SAMEA2383223	GCA_900023225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/225/GCA_900023225.1_12754_4_13	-	2842STDY5753770
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95228	52.1	-	CTFW01	93	5118	4863	3/26/15	2/27/17	Scaffold	SC	SAMEA773621	GCA_001218745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/745/GCA_001218745.1_5275_6_10	-	H11
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77126	32.6	-	FGUQ01	18	2883	2732	2/10/16	3/5/17	Contig	SC	SAMEA1317313	GCA_900041185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/185/GCA_900041185.1_7469_7_77	-	st2099
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81172	32.7	-	FGVL01	59	2905	2761	2/10/16	3/5/17	Contig	SC	SAMEA1469637	GCA_900041195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/195/GCA_900041195.1_7480_8_14	-	st2208
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95275	52.1	-	CTHY01	127	5123	4851	3/26/15	2/27/17	Scaffold	SC	SAMEA773586	GCA_001218765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/765/GCA_001218765.1_5299_3_12	-	V52
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06449	39.6	-	FENJ01	45	2248	2025	2/9/16	3/12/17	Scaffold	SC	SAMEA2383249	GCA_900023235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/235/GCA_900023235.1_12754_4_39	-	2842STDY5753796
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.90648	50.7	-	JSLV01	58	4982	4708	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802006	GCA_000779635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/635/GCA_000779635.1_ASM77963v1	25373147	upec-188
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.1741	50.6	-	JSPJ01	110	5436	5069	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801900	GCA_000779655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/655/GCA_000779655.1_ASM77965v1	25373147	blood-2011-0240
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1193	39.5	-	FEOQ01	58	2327	2079	2/9/16	3/12/17	Scaffold	SC	SAMEA2674644	GCA_900023245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/245/GCA_900023245.1_14412_3_22	-	2842STDY5881904
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.98102	52.1	-	CTOY01	85	5180	4890	3/26/15	2/27/17	Scaffold	SC	SAMEA1521982	GCA_001218785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/785/GCA_001218785.1_8080_3_45	-	H140
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81691	32.6	-	FGVT01	59	2903	2751	2/10/16	3/6/17	Contig	SC	SAMEA1469562	GCA_900041205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/205/GCA_900041205.1_7480_8_26	-	st2258
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81338	32.7	-	FGVW01	30	2908	2787	2/10/16	3/5/17	Contig	SC	SAMEA1469613	GCA_900041215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/215/GCA_900041215.1_7480_8_32	-	st2293
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97332	52.1	-	CTNC01	92	5153	4879	3/26/15	2/27/17	Scaffold	SC	SAMEA773613	GCA_001218805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/805/GCA_001218805.1_5285_7_3	-	H51
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.14909	39.6	-	FDRQ01	56	2396	2135	2/9/16	3/13/17	Scaffold	SC	SAMEA2239121	GCA_900023265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/265/GCA_900023265.1_11860_7_82	-	2842STDY5644502
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.16555	50.5	-	JSLW01	74	5330	5066	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02802005	GCA_000779675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/675/GCA_000779675.1_ASM77967v1	25373147	upec-187
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.11556	50.5	-	JSLZ01	60	5247	4939	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802002	GCA_000779715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/715/GCA_000779715.1_ASM77971v1	25373147	upec-184
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.16001	39.6	-	FDQT01	70	2392	2115	2/9/16	3/13/17	Scaffold	SC	SAMEA2239154	GCA_900023275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/275/GCA_900023275.1_11860_8_20	-	2842STDY5644536
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97893	52.1	-	CTQO01	80	5171	4888	3/26/15	2/27/17	Scaffold	SC	SAMEA1522043	GCA_001218825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/825/GCA_001218825.1_8080_3_14	-	H109
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83613	32.7	-	FGVZ01	75	2931	2768	2/10/16	3/5/17	Contig	SC	SAMEA1469615	GCA_900041225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/225/GCA_900041225.1_7480_8_33	-	st2295
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85558	32.7	-	FGWG01	24	3025	2861	2/10/16	3/5/17	Contig	SC	SAMEA1464375	GCA_900041235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/235/GCA_900041235.1_7748_6_32	-	st2374
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	5.07688	52.1	-	CTPY01	80	5277	5003	3/26/15	2/27/17	Scaffold	SC	SAMEA773500	GCA_001218845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/845/GCA_001218845.1_5275_5_7	-	V23
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11367	39.7	-	FDTB01	37	2367	2099	2/9/16	3/13/17	Scaffold	SC	SAMEA2239207	GCA_900023285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/285/GCA_900023285.1_11860_8_75	-	2842STDY5644589
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	6.35865	50.1	-	JSMA01	572	7074	5848	11/13/14	2/25/17	Scaffold	University of Washington	SAMN02802000	GCA_000779735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/735/GCA_000779735.1_ASM77973v1	25373147	upec-182
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.18949	50.4	-	JSMB01	99	5320	4947	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801999	GCA_000779795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/795/GCA_000779795.1_ASM77979v1	25373147	upec-181
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08034	39.7	-	FDZF01	35	2286	2040	2/9/16	3/13/17	Scaffold	SC	SAMEA2239308	GCA_900023295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/295/GCA_900023295.1_11861_5_83	-	2842STDY5644692
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97591	52.1	-	CTMO01	106	5152	4871	3/26/15	2/27/17	Scaffold	SC	SAMEA773555	GCA_001218865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/865/GCA_001218865.1_5285_7_12	-	H59
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78124	32.7	-	FGED01	50	2873	2720	2/10/16	3/5/17	Contig	SC	SAMEA1464680	GCA_900041775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/775/GCA_900041775.1_7554_6_82	-	st313
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79232	32.7	-	FGKO01	18	2931	2775	2/10/16	3/5/17	Contig	SC	SAMEA1469688	GCA_900041785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/785/GCA_900041785.1_7480_7_80	-	st1315
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97827	52.1	-	CTHL01	78	5160	4882	3/26/15	2/27/17	Scaffold	SC	SAMEA1521978	GCA_001218885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/885/GCA_001218885.1_8080_3_82	-	V102
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08515	39.6	-	FDZT01	24	2315	2071	2/9/16	3/13/17	Scaffold	SC	SAMEA2238472	GCA_900023305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/305/GCA_900023305.1_11822_8_35	-	2842STDY5643843
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.31882	50.5	-	JSMC01	116	5585	5222	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801998	GCA_000779815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/815/GCA_000779815.1_ASM77981v1	25373147	upec-180
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.06814	50.7	-	JSMF01	62	5235	4962	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801994	GCA_000779875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/875/GCA_000779875.1_ASM77987v1	25373147	upec-177
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15906	39.6	-	FDZU01	28	2367	2134	2/9/16	3/13/17	Scaffold	SC	SAMEA2238473	GCA_900023315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/315/GCA_900023315.1_11860_6_6	-	2842STDY5643844
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.94842	52.1	-	CTMY01	84	5103	4860	3/26/15	2/27/17	Scaffold	SC	SAMEA773515	GCA_001218925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/925/GCA_001218925.1_5275_7_5	-	H18
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81553	32.7	-	FGNV01	52	2896	2748	2/10/16	3/6/17	Contig	SC	SAMEA1464322	GCA_900041795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/795/GCA_900041795.1_7521_6_57	-	st1638
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85025	32.7	-	FGNX01	41	3002	2811	2/10/16	3/5/17	Contig	SC	SAMEA1464682	GCA_900041805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/805/GCA_900041805.1_7521_6_59	-	st1643
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95847	52.1	-	CTPW01	81	5120	4869	3/26/15	2/27/17	Scaffold	SC	SAMEA773497	GCA_001218965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/965/GCA_001218965.1_5275_5_12	-	V11
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08922	39.5	-	FEAE01	64	2313	2025	2/9/16	3/13/17	Scaffold	SC	SAMEA2238489	GCA_900023325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/325/GCA_900023325.1_11860_6_22	-	2842STDY5643860
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.45095	50.9	-	JSMG01	88	5713	5332	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801993	GCA_000779895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/895/GCA_000779895.1_ASM77989v1	25373147	upec-176
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.10808	50.6	-	JSMH01	76	5245	4965	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801992	GCA_000779915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/915/GCA_000779915.1_ASM77991v1	25373147	upec-175
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01491	39.8	-	FEAG01	30	2243	2013	2/9/16	3/13/17	Scaffold	SC	SAMEA2238492	GCA_900023335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/335/GCA_900023335.1_11860_6_25	-	2842STDY5643863
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.96705	52.1	-	CTHW01	99	5153	4878	3/26/15	2/27/17	Scaffold	SC	SAMEA1484074	GCA_001218985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/218/985/GCA_001218985.1_8036_3_57	-	V125
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83761	32.7	-	FGNZ01	64	2937	2778	2/10/16	3/5/17	Contig	SC	SAMEA1464702	GCA_900041815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/815/GCA_900041815.1_7521_6_63	-	st1659
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82269	32.7	-	FGOC01	46	2917	2762	2/10/16	3/5/17	Contig	SC	SAMEA1464599	GCA_900041825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/825/GCA_900041825.1_7521_6_66	-	st1665
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.97267	52.1	-	CTMG01	92	5160	4875	3/26/15	2/27/17	Scaffold	SC	SAMEA1483991	GCA_001219005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/005/GCA_001219005.1_8036_3_47	-	V115
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1581	39.6	-	FEAI01	47	2422	2158	2/9/16	3/13/17	Scaffold	SC	SAMEA2238494	GCA_900023345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/345/GCA_900023345.1_11860_6_27	-	2842STDY5643865
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	5.01358	50.7	-	JSMK01	85	5188	4852	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801988	GCA_000780015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/015/GCA_000780015.1_ASM78001v1	25373147	upec-171
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.92939	50.8	-	JSML01	143	5173	4774	11/13/14	2/23/17	Scaffold	University of Washington	SAMN02801987	GCA_000780035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/035/GCA_000780035.1_ASM78003v1	25373147	upec-170
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99059	39.7	-	FEAR01	25	2189	1969	2/9/16	3/15/17	Scaffold	SC	SAMEA2238506	GCA_900023355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/355/GCA_900023355.1_11860_6_40	-	2842STDY5643877
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97719	52.1	-	CTQP01	88	5153	4880	3/26/15	2/27/17	Scaffold	SC	SAMEA1521996	GCA_001219025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/025/GCA_001219025.1_8080_3_29	-	H124
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83568	32.7	-	FGOD01	55	2933	2783	2/10/16	3/5/17	Contig	SC	SAMEA1464615	GCA_900041835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/835/GCA_900041835.1_7521_6_68	-	st1667
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.94749	32.7	-	FGOG01	58	3114	2908	2/10/16	3/5/17	Contig	SC	SAMEA1464208	GCA_900041845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/845/GCA_900041845.1_7521_6_71	-	st1684
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95929	52.1	-	CTPC01	83	5138	4856	3/26/15	2/27/17	Scaffold	SC	SAMEA773617	GCA_001219045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/045/GCA_001219045.1_5275_6_6	-	H08
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05766	39.6	-	FEAU01	30	2239	1997	2/9/16	3/12/17	Scaffold	SC	SAMEA2238512	GCA_900023365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/365/GCA_900023365.1_11860_6_47	-	2842STDY5643883
Escherichia coli	562	PRJNA266691	266691	Proteobacteria	Gammaproteobacteria	4.95416	50.4	-	JWHN01	188	5260	4740	12/19/14	2/23/17	Scaffold	Maulana Azad Medical College	SAMN03168300	GCA_000806175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/175/GCA_000806175.1_Assembly_535	25657280	MAMC18
Escherichia coli	562	PRJNA270579	270579	Proteobacteria	Gammaproteobacteria	5.1741	50.5	-	JWJM01	177	5488	5070	12/19/14	2/23/17	Scaffold	University of Copenhagen	SAMN03267484	GCA_000806195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/806/195/GCA_000806195.1_ASM80619v1	-	912
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1127	39.6	-	FEAP01	56	2325	2066	2/9/16	3/5/17	Scaffold	SC	SAMEA2238504	GCA_900023375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/375/GCA_900023375.1_11860_6_38	-	2842STDY5643875
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.96507	52.1	-	CTNM01	84	5147	4879	3/26/15	2/27/17	Scaffold	SC	SAMEA773556	GCA_001219065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/065/GCA_001219065.1_5285_7_9	-	H56
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83425	32.7	-	FGOF01	56	2935	2780	2/10/16	3/5/17	Contig	SC	SAMEA1464201	GCA_900041855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/855/GCA_900041855.1_7521_6_72	-	st1689
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83398	32.7	-	FGOI01	53	2929	2780	2/10/16	3/6/17	Contig	SC	SAMEA1317512	GCA_900041865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/865/GCA_900041865.1_7414_7_8	-	st28
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.97488	52.1	-	CTPH01	90	5162	4882	3/26/15	2/27/17	Scaffold	SC	SAMEA1484083	GCA_001219085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/085/GCA_001219085.1_8036_3_58	-	V126
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98634	39.8	-	FEBB01	46	2201	1940	2/9/16	3/13/17	Scaffold	SC	SAMEA2238526	GCA_900023385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/385/GCA_900023385.1_11860_6_60	-	2842STDY5643897
Escherichia coli	562	PRJNA268516	268516	Proteobacteria	Gammaproteobacteria	4.97992	50.8	-	JTKA01	125	5175	4834	12/31/14	2/23/17	Scaffold	Centers for Disease Control and prevention	SAMN03220397	GCA_000812645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/812/645/GCA_000812645.1_ASM81264v1	25744985	ST167
Escherichia coli	562	PRJNA261490	261490	Proteobacteria	Gammaproteobacteria	5.25649	50.6	-	JRLD01	221	5592	5200	3/5/15	2/23/17	Scaffold	unverisity medical center groningen	SAMN03075146	GCA_000947935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/947/935/GCA_000947935.1_ASM94793v1	25656624	381-4
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98157	39.8	-	FEBT01	49	2186	1928	2/9/16	3/13/17	Scaffold	SC	SAMEA2238555	GCA_900023395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/395/GCA_900023395.1_11860_6_89	-	2842STDY5643926
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95981	52.1	-	CTNY01	111	5131	4861	3/26/15	2/27/17	Scaffold	SC	SAMEA773557	GCA_001219105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/105/GCA_001219105.1_5285_7_10	-	H57
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.7899	32.7	-	FGOL01	52	2887	2736	2/10/16	3/6/17	Contig	SC	SAMEA1317361	GCA_900041875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/875/GCA_900041875.1_7414_7_43	-	st97
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86747	32.7	-	FGOO01	45	3009	2827	2/10/16	3/5/17	Contig	SC	SAMEA1464573	GCA_900041885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/885/GCA_900041885.1_7554_6_24	-	st168
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.94861	52.1	-	CTLY01	91	5113	4861	3/26/15	2/27/17	Scaffold	SC	SAMEA773569	GCA_001219125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/125/GCA_001219125.1_5275_8_4	-	H63
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98705	39.8	-	FECA01	49	2206	1925	2/9/16	3/13/17	Scaffold	SC	SAMEA2238566	GCA_900023405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/405/GCA_900023405.1_11861_1_4	-	2842STDY5643938
Escherichia coli	562	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	5.0935	50.8	-	JYLT01	197	5374	5019	3/13/15	2/23/17	Scaffold	University of Minnesota	SAMN03333144	GCA_000952225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/225/GCA_000952225.1_ASM95222v1	26438492	MNCRE47
Escherichia coli	562	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	5.18004	50.8	-	JYLS01	209	5493	5125	3/13/15	2/23/17	Scaffold	University of Minnesota	SAMN03333143	GCA_000952305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/305/GCA_000952305.1_ASM95230v1	26438492	MNCRE46
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07061	39.6	-	FECC01	26	2296	2059	2/9/16	3/15/17	Scaffold	SC	SAMEA2238573	GCA_900023415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/415/GCA_900023415.1_11861_1_11	-	2842STDY5643945
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.93662	52.1	-	CTQL01	374	5186	4757	3/26/15	2/27/17	Scaffold	SC	SAMEA773650	GCA_001219145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/145/GCA_001219145.1_5295_2_4	-	H74
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79863	32.7	-	FGOV01	62	2895	2741	2/10/16	3/6/17	Contig	SC	SAMEA1317370	GCA_900041905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/905/GCA_900041905.1_7414_7_77	-	st442
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80196	32.7	-	FGOX01	42	2894	2744	2/10/16	3/5/17	Contig	SC	SAMEA1317339	GCA_900041915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/915/GCA_900041915.1_7414_8_9	-	st519
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.96512	52.1	-	CTME01	86	5145	4878	3/26/15	2/27/17	Scaffold	SC	SAMEA773559	GCA_001219165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/165/GCA_001219165.1_5285_7_8	-	H55
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04643	39.6	-	FECM01	29	2236	2010	2/9/16	3/13/17	Scaffold	SC	SAMEA2238585	GCA_900023425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/425/GCA_900023425.1_11861_1_22	-	2842STDY5643957
Escherichia coli	562	PRJNA272863	272863	Proteobacteria	Gammaproteobacteria	5.17725	50.8	-	JYLV01	227	5467	5094	3/13/15	2/23/17	Scaffold	University of Minnesota	SAMN03333146	GCA_000952385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/952/385/GCA_000952385.1_ASM95238v1	26438492	MNCRE45
Escherichia coli	562	PRJNA275276	275276	Proteobacteria	Gammaproteobacteria	5.56698	50.5	-	JZDU01	210	6157	5643	3/27/15	2/23/17	Scaffold	Norwegian University of Science and Technology	SAMN03340668	GCA_000965545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/545/GCA_000965545.1_ASM96554v1	25977421	St. Olav39
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09633	39.5	-	FECL01	42	2288	2045	2/9/16	3/13/17	Scaffold	SC	SAMEA2238584	GCA_900023435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/435/GCA_900023435.1_11861_1_21	-	2842STDY5643956
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.9685	52.1	-	CTQM01	102	5153	4875	3/26/15	2/27/17	Scaffold	SC	SAMEA1484094	GCA_001219185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/185/GCA_001219185.1_8036_3_55	-	V123
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81841	32.7	-	FGPA01	51	2904	2748	2/10/16	8/21/17	Contig	SC	SAMEA1464395	GCA_900041925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/925/GCA_900041925.1_7712_8_2	-	st637
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79746	32.7	-	FGPB01	58	2861	2720	2/10/16	3/5/17	Contig	SC	SAMEA1464384	GCA_900041935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/935/GCA_900041935.1_7712_8_10	-	st664
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.96981	52.1	-	CTFY01	87	5157	4874	3/26/15	2/27/17	Scaffold	SC	SAMEA1484086	GCA_001219205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/205/GCA_001219205.1_8036_3_48	-	V116
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98002	39.7	-	FECW01	22	2181	1950	2/9/16	3/8/17	Scaffold	SC	SAMEA2238606	GCA_900023445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/445/GCA_900023445.1_11861_1_44	-	2842STDY5643978
Escherichia coli	562	PRJNA275276	275276	Proteobacteria	Gammaproteobacteria	5.31114	50.4	-	JZEC01	206	5834	5291	3/27/15	2/23/17	Scaffold	Norwegian University of Science and Technology	SAMN03340676	GCA_000965555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/555/GCA_000965555.1_ASM96555v1	25977421	St. Olav178
Escherichia coli	562	PRJNA275276	275276	Proteobacteria	Gammaproteobacteria	5.56211	50.6	-	JZDY01	239	5960	5416	3/27/15	2/23/17	Scaffold	Norwegian University of Science and Technology	SAMN03340672	GCA_000965565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/565/GCA_000965565.1_ASM96556v1	25977421	St. Olav172
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99195	39.8	-	FEDH01	43	2198	1935	2/9/16	3/15/17	Scaffold	SC	SAMEA2238625	GCA_900023455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/455/GCA_900023455.1_11861_1_63	-	2842STDY5643997
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95679	52.1	-	CTKG01	81	5122	4865	3/26/15	2/27/17	Scaffold	SC	SAMEA773591	GCA_001219225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/225/GCA_001219225.1_5275_3_1	-	V53
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84032	32.7	-	FGPG01	62	2972	2786	2/10/16	3/5/17	Contig	SC	SAMEA1464657	GCA_900041945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/945/GCA_900041945.1_7712_8_86	-	st850
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83101	32.7	-	FGPH01	54	2929	2781	2/10/16	3/5/17	Contig	SC	SAMEA1317501	GCA_900041955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/955/GCA_900041955.1_7414_8_53	-	st880
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.96621	52.1	-	CTQF01	102	5146	4874	3/26/15	2/27/17	Scaffold	SC	SAMEA773525	GCA_001219285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/285/GCA_001219285.1_5388_1_2	-	H27
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05942	39.5	-	FEDM01	36	2278	2039	2/9/16	3/15/17	Scaffold	SC	SAMEA2238635	GCA_900023465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/465/GCA_900023465.1_11861_1_73	-	2842STDY5644007
Escherichia coli	562	PRJNA275276	275276	Proteobacteria	Gammaproteobacteria	5.49871	50.5	-	JZDV01	216	6055	5536	3/27/15	2/23/17	Scaffold	Norwegian University of Science and Technology	SAMN03340669	GCA_000965575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/575/GCA_000965575.1_ASM96557v1	25977421	St. Olav40
Escherichia coli	562	PRJNA275276	275276	Proteobacteria	Gammaproteobacteria	5.32268	50.5	-	JZDW01	120	5737	5291	3/27/15	2/23/17	Scaffold	Norwegian University of Science and Technology	SAMN03340670	GCA_000965625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/625/GCA_000965625.1_ASM96562v1	25977421	St. Olav63
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08758	39.7	-	FEDO01	39	2318	2061	2/9/16	3/13/17	Scaffold	SC	SAMEA2238639	GCA_900023475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/475/GCA_900023475.1_11861_1_77	-	2842STDY5644011
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.92832	52.1	-	CTOL01	78	5080	4835	3/26/15	2/27/17	Scaffold	SC	SAMEA773512	GCA_001219305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/305/GCA_001219305.1_5275_7_4	-	H17
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85647	32.7	-	FGPJ01	71	2992	2817	2/10/16	3/5/17	Contig	SC	SAMEA1317555	GCA_900041965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/965/GCA_900041965.1_7414_8_55	-	st886
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78199	32.7	-	FGPP01	69	2870	2725	2/10/16	3/5/17	Contig	SC	SAMEA1317432	GCA_900041975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/975/GCA_900041975.1_7414_8_79	-	st939
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.92775	52.1	-	CTOJ01	80	5083	4813	3/26/15	2/27/17	Scaffold	SC	SAMEA1521994	GCA_001219365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/365/GCA_001219365.1_8080_3_56	-	V76
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08693	39.7	-	FEEC01	41	2291	2049	2/9/16	3/8/17	Scaffold	SC	SAMEA2238668	GCA_900023485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/485/GCA_900023485.1_11861_2_6	-	2842STDY5644041
Escherichia coli	562	PRJNA275276	275276	Proteobacteria	Gammaproteobacteria	5.38791	50.5	-	JZDX01	181	5872	5390	3/27/15	2/23/17	Scaffold	Norwegian University of Science and Technology	SAMN03340671	GCA_000965635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/635/GCA_000965635.1_ASM96563v1	25977421	St. Olav157
Escherichia coli	562	PRJNA275276	275276	Proteobacteria	Gammaproteobacteria	5.63079	50.4	-	JZDZ01	222	6116	5554	3/27/15	2/23/17	Scaffold	Norwegian University of Science and Technology	SAMN03340673	GCA_000965655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/655/GCA_000965655.1_ASM96565v1	25977421	St. Olav173
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02361	39.7	-	FEEH01	14	2213	1988	2/9/16	3/13/17	Scaffold	SC	SAMEA2238678	GCA_900023495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/495/GCA_900023495.1_11861_2_17	-	2842STDY5644051
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95026	52.1	-	CTPX01	98	5114	4861	3/26/15	2/27/17	Scaffold	SC	SAMEA773593	GCA_001219405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/405/GCA_001219405.1_5275_8_7	-	V55
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82364	32.7	-	FGPN01	60	2924	2777	2/10/16	3/5/17	Contig	SC	SAMEA1317411	GCA_900041985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/985/GCA_900041985.1_7414_8_82	-	st945
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.71405	32.7	-	FGPQ01	24	2763	2650	2/10/16	3/5/17	Contig	SC	SAMEA1317493	GCA_900041995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/995/GCA_900041995.1_7414_8_91	-	st970
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95474	52.1	-	CTJU01	93	5121	4868	3/26/15	2/27/17	Scaffold	SC	SAMEA773616	GCA_001219425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/425/GCA_001219425.1_5275_6_5	-	H07
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0479	39.6	-	FEEN01	26	2254	2027	2/9/16	3/13/17	Scaffold	SC	SAMEA2238692	GCA_900023505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/505/GCA_900023505.1_11861_2_32	-	2842STDY5644065
Escherichia coli	562	PRJNA275276	275276	Proteobacteria	Gammaproteobacteria	5.78578	50.6	-	JZEA01	306	6469	5909	3/27/15	2/23/17	Scaffold	Norwegian University of Science and Technology	SAMN03340674	GCA_000965665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/665/GCA_000965665.1_ASM96566v1	25977421	St. Olav174
Escherichia coli	562	PRJNA275276	275276	Proteobacteria	Gammaproteobacteria	5.56394	50.5	-	JZED01	237	6136	5638	3/27/15	2/23/17	Scaffold	Norwegian University of Science and Technology	SAMN03340677	GCA_000965705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/705/GCA_000965705.1_ASM96570v1	25977421	St. Olav179
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08291	39.6	-	FEEM01	40	2266	2044	2/9/16	3/12/17	Scaffold	SC	SAMEA2238691	GCA_900023515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/515/GCA_900023515.1_11861_2_30	-	2842STDY5644064
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.9744	52.1	-	CTQA01	87	5157	4878	3/26/15	2/27/17	Scaffold	SC	SAMEA1484014	GCA_001219445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/445/GCA_001219445.1_8036_3_74	-	UNITED_STATES
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86787	32.7	-	FGPT01	71	2988	2829	2/10/16	3/5/17	Contig	SC	SAMEA1464218	GCA_900042005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/005/GCA_900042005.1_7521_5_6	-	st990
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83992	32.7	-	FGPW01	59	2954	2794	2/10/16	3/5/17	Contig	SC	SAMEA1464186	GCA_900042015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/015/GCA_900042015.1_7521_5_19	-	st1014
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.9386	52.1	-	CTJW01	53	5102	4835	3/26/15	2/27/17	Scaffold	SC	SAMEA1522028	GCA_001219465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/465/GCA_001219465.1_8080_3_92	-	V112
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0597	39.5	-	FEEX01	32	2284	2036	2/9/16	3/13/17	Scaffold	SC	SAMEA2238709	GCA_900023525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/525/GCA_900023525.1_11861_2_49	-	2842STDY5644082
Escherichia coli	562	PRJNA275276	275276	Proteobacteria	Gammaproteobacteria	5.4638	50.5	-	JZEB01	210	6038	5464	3/27/15	2/23/17	Scaffold	Norwegian University of Science and Technology	SAMN03340675	GCA_000965715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/965/715/GCA_000965715.1_ASM96571v1	25977421	St. Olav176
Escherichia coli	562	PRJNA275276	275276	Proteobacteria	Gammaproteobacteria	5.45421	50.5	-	JYKT01	146	5944	5455	3/31/15	2/23/17	Scaffold	Norwegian University of Science and Technology	SAMN03340667	GCA_000966935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/966/935/GCA_000966935.1_ASM96693v1	25977421	St. Olav17
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08064	39.7	-	FEFA01	39	2314	2095	2/9/16	3/13/17	Scaffold	SC	SAMEA2238713	GCA_900023535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/535/GCA_900023535.1_11861_2_53	-	2842STDY5644086
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.9603	52.1	-	CTHS01	72	5129	4876	3/26/15	2/27/17	Scaffold	SC	SAMEA773596	GCA_001219485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/485/GCA_001219485.1_5275_6_4	-	H06
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83493	32.7	-	FGPX01	58	2927	2779	2/10/16	3/6/17	Contig	SC	SAMEA1464176	GCA_900042025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/025/GCA_900042025.1_7521_5_14	-	st1003
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82962	32.7	-	FGPZ01	62	2935	2779	2/10/16	3/5/17	Contig	SC	SAMEA1464687	GCA_900042035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/035/GCA_900042035.1_7521_5_22	-	st1021
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.87904	52.1	-	CTQJ01	137	5045	4760	3/26/15	2/27/17	Scaffold	SC	SAMEA773563	GCA_001219505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/505/GCA_001219505.1_5299_3_1	-	V42
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02929	39.7	-	FEFE01	34	2245	2024	2/9/16	3/13/17	Scaffold	SC	SAMEA2238717	GCA_900023545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/545/GCA_900023545.1_11861_2_57	-	2842STDY5644090
Escherichia coli	562	PRJNA278062	278062	Proteobacteria	Gammaproteobacteria	5.15679	50.6	-	LARS01	483	5524	4915	4/6/15	2/23/17	Scaffold	MSU	SAMN03402191	GCA_000969495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/495/GCA_000969495.1_ASM96949v1	25883908	TW18710
Escherichia coli	562	PRJNA278060	278060	Proteobacteria	Gammaproteobacteria	5.1035	50.5	-	LARR01	752	5519	4882	4/6/15	2/23/17	Scaffold	MSU	SAMN03402228	GCA_000969545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/969/545/GCA_000969545.1_ASM96954v1	25883908	TW18703
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05991	39.5	-	FEFF01	28	2272	2041	2/9/16	3/13/17	Scaffold	SC	SAMEA2238718	GCA_900023555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/555/GCA_900023555.1_11861_2_58	-	2842STDY5644091
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.93808	52.1	-	CTJN01	53	5097	4816	3/26/15	2/27/17	Scaffold	SC	SAMEA1707598	GCA_001219525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/525/GCA_001219525.1_9065_1_4	-	EWV8
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83418	32.7	-	FGPY01	50	2954	2781	2/10/16	3/5/17	Contig	SC	SAMEA1464668	GCA_900042045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/045/GCA_900042045.1_7521_5_31	-	st1051
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80019	32.7	-	FGQB01	48	2894	2750	2/10/16	3/6/17	Contig	SC	SAMEA1464711	GCA_900042055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/055/GCA_900042055.1_7521_5_39	-	st1074
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95851	52.1	-	CTMU01	87	5128	4873	3/26/15	2/27/17	Scaffold	SC	SAMEA773605	GCA_001219545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/545/GCA_001219545.1_5275_3_7	-	V63
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15816	39.6	-	FCPS01	45	2377	2141	2/6/16	3/13/17	Scaffold	SC	SAMEA2238729	GCA_900023565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/565/GCA_900023565.1_11861_2_69	-	2842STDY5644102
Escherichia coli O157:H7	83334	PRJNA280853	280853	Proteobacteria	Gammaproteobacteria	5.53516	50.2	-	LAZD01	335	6076	5564	4/23/15	2/23/17	Scaffold	Instituto Nacional de Tecnologia Agropecuaria	SAMN03470769	GCA_000978815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/978/815/GCA_000978815.1_ASM97881v1	26067964	7.1_Anguil
Escherichia coli O157:H7	83334	PRJNA283265	283265	Proteobacteria	Gammaproteobacteria	5.01819	50.3	-	LCWU01	246	5354	4897	5/13/15	2/23/17	Scaffold	Beijing Institute of Microbiology and Epidemiology	SAMN03610675	GCA_001006425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/006/425/GCA_001006425.1_ASM100642v1	-	HB74
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09775	39.6	-	FEFM01	34	2287	2051	2/9/16	3/13/17	Scaffold	SC	SAMEA2238733	GCA_900023575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/575/GCA_900023575.1_11861_2_73	-	2842STDY5644106
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.9772	52.1	-	CTOX01	82	5167	4887	3/26/15	2/27/17	Scaffold	SC	SAMEA1522048	GCA_001219565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/565/GCA_001219565.1_8080_3_74	-	V94
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77851	32.7	-	FGQF01	58	2860	2710	2/10/16	3/5/17	Contig	SC	SAMEA1469610	GCA_900042065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/065/GCA_900042065.1_7480_7_10	-	st1135
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83004	32.7	-	FGQI01	65	2932	2780	2/10/16	3/5/17	Contig	SC	SAMEA1469616	GCA_900042075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/075/GCA_900042075.1_7480_7_19	-	st1153
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97543	52.1	-	CTIC01	88	5148	4871	3/26/15	2/27/17	Scaffold	SC	SAMEA1521998	GCA_001219585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/585/GCA_001219585.1_8080_3_5	-	H100
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98049	39.8	-	FCPL01	22	2204	1965	2/6/16	3/15/17	Scaffold	SC	SAMEA2238735	GCA_900023585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/585/GCA_900023585.1_11861_2_75	-	2842STDY5644108
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.24025	50.3	-	LDDN01	226	5700	5211	5/22/15	2/23/17	Scaffold	FDA/CFSAN	SAMN03455853	GCA_001011995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/011/995/GCA_001011995.1_CFSAN026838_01.0	26430026	CFSAN026838
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.08927	50.7	-	LDDW01	163	5368	4994	5/22/15	2/23/17	Scaffold	FDA/CFSAN	SAMN03455788	GCA_001012005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/005/GCA_001012005.1_CFSAN026773_02.0	26430026	CFSAN026773
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01396	39.8	-	FEFT01	23	2242	2000	2/9/16	3/13/17	Scaffold	SC	SAMEA2238757	GCA_900023595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/595/GCA_900023595.1_12273_1_92	-	2842STDY5644131
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	5.02479	52.1	-	CTGB01	111	5211	4944	3/26/15	2/27/17	Scaffold	SC	SAMEA773653	GCA_001219645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/645/GCA_001219645.1_5295_2_7	-	V56
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.75634	32.7	-	FGQM01	55	2816	2682	2/10/16	3/5/17	Contig	SC	SAMEA1469592	GCA_900042085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/085/GCA_900042085.1_7480_7_43	-	st1226
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78516	32.7	-	FGQQ01	84	2890	2734	2/10/16	3/5/17	Contig	SC	SAMEA1469717	GCA_900042095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/095/GCA_900042095.1_7480_7_55	-	st1265
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.92157	52.1	-	CTGN01	133	5110	4819	3/26/15	2/27/17	Scaffold	SC	SAMEA773521	GCA_001219665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/665/GCA_001219665.1_5388_1_6	-	H31
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06664	39.6	-	FEFV01	35	2268	2026	2/9/16	3/13/17	Scaffold	SC	SAMEA2238773	GCA_900023605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/605/GCA_900023605.1_11893_1_16	-	2842STDY5644147
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.2374	50.4	-	LDDK01	216	5623	5169	5/22/15	2/23/17	Scaffold	FDA/CFSAN	SAMN03455814	GCA_001012015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/015/GCA_001012015.1_CFSAN026799_01.0	26430026	CFSAN026799
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.76931	50.8	-	LDCQ01	57	4881	4628	5/22/15	2/23/17	Scaffold	FDA/CFSAN	SAMN03455849	GCA_001012085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/085/GCA_001012085.1_CFSAN026834_01.0	-	CFSAN026834
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07855	39.7	-	FCQF01	23	2285	2060	2/6/16	3/13/17	Scaffold	SC	SAMEA2238778	GCA_900023615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/615/GCA_900023615.1_11893_1_21	-	2842STDY5644152
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.92861	52.1	-	CTLO01	78	5102	4846	3/26/15	2/27/17	Scaffold	SC	SAMEA773643	GCA_001219685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/685/GCA_001219685.1_5285_6_1	-	H37
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80339	32.7	-	FGQP01	71	2903	2750	2/10/16	3/5/17	Contig	SC	SAMEA1469710	GCA_900042105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/105/GCA_900042105.1_7480_7_61	-	st1278
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84318	32.7	-	FGQR01	90	2951	2793	2/10/16	3/6/17	Contig	SC	SAMEA1469666	GCA_900042115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/115/GCA_900042115.1_7480_7_64	-	st1284
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97876	52.1	-	CTJT01	88	5153	4871	3/26/15	2/27/17	Scaffold	SC	SAMEA1522000	GCA_001219705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/705/GCA_001219705.1_8080_3_83	-	V103
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.989	39.7	-	FCQT01	19	2209	1969	2/6/16	3/13/17	Scaffold	SC	SAMEA2239036	GCA_900023625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/625/GCA_900023625.1_11861_4_90	-	2842STDY5644415
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.0457	50.8	-	LDDU01	231	5355	4973	5/22/15	2/23/17	Scaffold	FDA/CFSAN	SAMN03455794	GCA_001012155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/155/GCA_001012155.1_CFSAN026779_02.0	26430026	CFSAN026779
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.44719	50.3	-	LDDD01	209	5891	5464	5/22/15	2/23/17	Scaffold	FDA/CFSAN	SAMN03455830	GCA_001012405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/405/GCA_001012405.1_CFSAN026815_01.0	26430026	CFSAN026815
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.118	39.6	-	FCQX01	35	2314	2071	2/6/16	3/12/17	Scaffold	SC	SAMEA2239028	GCA_900023635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/635/GCA_900023635.1_11861_4_82	-	2842STDY5644406
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97893	52.1	-	CTHU01	81	5159	4873	3/26/15	2/27/17	Scaffold	SC	SAMEA1522045	GCA_001219725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/725/GCA_001219725.1_8080_3_35	-	H130
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.90749	32.7	-	FGQV01	58	3066	2873	2/10/16	3/5/17	Contig	SC	SAMEA1464472	GCA_900042125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/125/GCA_900042125.1_7748_6_14	-	st1318
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.6806	32.7	-	FGQW01	16	2803	2654	2/10/16	3/5/17	Contig	SC	SAMEA1464451	GCA_900042135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/135/GCA_900042135.1_7748_6_15	-	st1332
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97227	52.1	-	CTQN01	80	5144	4877	3/26/15	2/27/17	Scaffold	SC	SAMEA1522031	GCA_001219765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/765/GCA_001219765.1_8080_3_57	-	V77
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98963	39.8	-	FCQO01	50	2205	1926	2/6/16	3/13/17	Scaffold	SC	SAMEA2239034	GCA_900023645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/645/GCA_900023645.1_11861_4_88	-	2842STDY5644412
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.40778	50.6	-	LDDC01	191	5908	5475	5/22/15	2/23/17	Scaffold	FDA/CFSAN	SAMN03455841	GCA_001012445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/445/GCA_001012445.1_CFSAN026826_02.0	26430026	CFSAN026826
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.34429	50.5	-	LDCY01	174	5720	5239	5/22/15	2/23/17	Scaffold	FDA/CFSAN	SAMN03455851	GCA_001012505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/505/GCA_001012505.1_CFSAN026836_01.0	26430026	CFSAN026836
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09062	39.6	-	FCRA01	34	2332	2071	2/6/16	3/13/17	Scaffold	SC	SAMEA2239045	GCA_900023655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/655/GCA_900023655.1_11860_7_3	-	2842STDY5644424
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.9725	52.1	-	CTPS01	97	5164	4882	3/26/15	2/28/17	Scaffold	SC	SAMEA1483999	GCA_001219805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/805/GCA_001219805.1_8036_3_75	-	SRI_LANKA
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80452	32.7	-	FGQX01	58	2903	2725	2/10/16	3/5/17	Contig	SC	SAMEA1469642	GCA_900042145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/145/GCA_900042145.1_7480_7_89	-	st1335
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85525	32.7	-	FGQY01	46	2990	2806	2/10/16	3/5/17	Contig	SC	SAMEA1464315	GCA_900042155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/155/GCA_900042155.1_7521_5_48	-	st1358
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.93135	52.1	-	CTND01	86	5111	4839	3/26/15	2/27/17	Scaffold	SC	SAMEA1483989	GCA_001219825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/825/GCA_001219825.1_8036_3_60	-	FAR_EAS
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15338	39.6	-	FCRI01	39	2384	2131	2/6/16	3/13/17	Scaffold	SC	SAMEA2383265	GCA_900023665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/665/GCA_900023665.1_12754_4_55	-	2842STDY5753812
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.41472	50.6	-	LDCW01	158	5821	5345	5/22/15	2/23/17	Scaffold	FDA/CFSAN	SAMN03455859	GCA_001012545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/012/545/GCA_001012545.1_CFSAN026844_01.0	26430026	CFSAN026844
Escherichia coli	562	PRJNA284656	284656	Proteobacteria	Gammaproteobacteria	5.84749	50.6	-	LDXI02	39	6333	5649	6/24/15	9/21/17	Scaffold	Anses	SAMN03704963	GCA_001039075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/075/GCA_001039075.2_ASM103907v2	26227606	36084
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11218	39.5	-	FCRO01	48	2326	2073	2/6/16	3/18/17	Scaffold	SC	SAMEA2239010	GCA_900023675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/675/GCA_900023675.1_11861_4_64	-	2842STDY5644387
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.9486	52.1	-	CTGS01	121	5121	4835	3/26/15	2/27/17	Scaffold	SC	SAMEA773585	GCA_001219845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/845/GCA_001219845.1_5299_3_11	-	V51
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77957	32.7	-	FGRJ01	49	2862	2713	2/10/16	3/5/17	Contig	SC	SAMEA1464214	GCA_900042165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/165/GCA_900042165.1_7521_5_68	-	st1403
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80371	32.7	-	FGRH01	65	2900	2747	2/10/16	3/5/17	Contig	SC	SAMEA1464658	GCA_900042175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/175/GCA_900042175.1_7521_5_76	-	st1439
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95983	52.1	-	CTHE01	121	5137	4863	3/26/15	2/27/17	Scaffold	SC	SAMEA773524	GCA_001219865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/865/GCA_001219865.1_5388_1_1	-	H26
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99954	39.7	-	FCRZ01	41	2209	1989	2/6/16	3/13/17	Scaffold	SC	SAMEA2238996	GCA_900023685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/685/GCA_900023685.1_11861_4_50	-	2842STDY5644372
Escherichia coli	562	PRJNA284656	284656	Proteobacteria	Gammaproteobacteria	5.89427	50.6	-	LDXG02	39	6468	5880	6/24/15	9/21/17	Scaffold	Anses	SAMN03704966	GCA_001039135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/135/GCA_001039135.2_ASM103913v2	26227606	36708
Escherichia coli	562	PRJNA284656	284656	Proteobacteria	Gammaproteobacteria	5.79704	50.6	-	LDXE02	27	6283	5731	6/24/15	9/21/17	Scaffold	Anses	SAMN03704968	GCA_001039145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/145/GCA_001039145.2_ASM103914v2	26227606	34870
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0744	39.6	-	FCSF01	43	2276	2043	2/6/16	3/13/17	Scaffold	SC	SAMEA2239073	GCA_900023695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/695/GCA_900023695.1_11860_7_33	-	2842STDY5644454
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.9775	52.1	-	CTHD01	87	5153	4879	3/26/15	2/27/17	Scaffold	SC	SAMEA1521975	GCA_001219885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/885/GCA_001219885.1_8080_3_38	-	H133
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78326	32.7	-	FGRE01	44	2872	2721	2/10/16	3/5/17	Contig	SC	SAMEA1464636	GCA_900042185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/185/GCA_900042185.1_7521_5_82	-	st1447
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80359	32.7	-	FGRG01	44	2899	2751	2/10/16	3/6/17	Contig	SC	SAMEA1464647	GCA_900042195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/195/GCA_900042195.1_7521_5_85	-	st1451
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.96918	52.1	-	CTNP01	86	5160	4875	3/26/15	2/27/17	Scaffold	SC	SAMEA1484077	GCA_001219905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/905/GCA_001219905.1_8036_3_54	-	V122
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15387	39.5	-	FCSC01	61	2357	2097	2/6/16	3/13/17	Scaffold	SC	SAMEA2239068	GCA_900023705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/705/GCA_900023705.1_11860_7_27	-	2842STDY5644448
Escherichia coli	562	PRJNA284656	284656	Proteobacteria	Gammaproteobacteria	5.93262	50.5	-	LDXF02	34	6465	5875	6/24/15	9/21/17	Scaffold	Anses	SAMN03704967	GCA_001039155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/155/GCA_001039155.2_ASM103915v2	26227606	34827
Escherichia coli	562	PRJNA284656	284656	Proteobacteria	Gammaproteobacteria	5.78832	50.7	-	LDXC02	33	6238	5704	6/24/15	9/21/17	Scaffold	Anses	SAMN03704970	GCA_001039205.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/205/GCA_001039205.2_ASM103920v2	26227606	36293
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15543	39.5	-	FCSO01	56	2353	2087	2/6/16	3/13/17	Scaffold	SC	SAMEA2239082	GCA_900023715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/715/GCA_900023715.1_11860_7_42	-	2842STDY5644463
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.92265	52.1	-	CTGO01	80	5095	4832	3/26/15	2/27/17	Scaffold	SC	SAMEA773644	GCA_001219945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/945/GCA_001219945.1_5285_6_2	-	H38
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87576	32.7	-	FGRO01	52	2995	2839	2/10/16	3/5/17	Contig	SC	SAMEA1464331	GCA_900042205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/205/GCA_900042205.1_7521_6_18	-	st1522
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.90456	32.7	-	FGRP01	56	3021	2864	2/10/16	3/5/17	Contig	SC	SAMEA1464338	GCA_900042215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/215/GCA_900042215.1_7521_6_21	-	st1526
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.92004	52.1	-	CTNX01	96	5062	4803	3/26/15	2/27/17	Scaffold	SC	SAMEA773567	GCA_001219965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/965/GCA_001219965.1_5299_3_5	-	V46
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.03903	39.7	-	FCSU01	28	2237	2017	2/6/16	3/15/17	Scaffold	SC	SAMEA2239095	GCA_900023725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/725/GCA_900023725.1_11860_7_56	-	2842STDY5644476
Escherichia coli	562	PRJNA284656	284656	Proteobacteria	Gammaproteobacteria	5.97145	50.6	-	LDXD02	38	6458	5937	6/24/15	9/21/17	Scaffold	Anses	SAMN03704969	GCA_001039215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/215/GCA_001039215.2_ASM103921v2	26227606	36348
Escherichia coli	562	PRJNA284656	284656	Proteobacteria	Gammaproteobacteria	5.75816	50.7	-	LDXB02	29	6209	5698	6/24/15	9/21/17	Scaffold	Anses	SAMN03704971	GCA_001039225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/039/225/GCA_001039225.2_ASM103922v2	26227606	36493
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01443	39.8	-	FCSN01	24	2253	2005	2/6/16	3/12/17	Scaffold	SC	SAMEA2239079	GCA_900023735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/735/GCA_900023735.1_11860_7_39	-	2842STDY5644460
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97673	52.1	-	CTMA01	82	5156	4880	3/26/15	2/27/17	Scaffold	SC	SAMEA1522017	GCA_001219985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/219/985/GCA_001219985.1_8080_3_6	-	H101
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79943	32.7	-	FGRQ01	36	2888	2746	2/10/16	3/5/17	Contig	SC	SAMEA1464349	GCA_900042225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/225/GCA_900042225.1_7564_8_10	-	st1542
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80908	32.7	-	FGRR01	50	2901	2749	2/10/16	3/5/17	Contig	SC	SAMEA1464350	GCA_900042235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/235/GCA_900042235.1_7521_6_29	-	st1553
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.86869	52.1	-	CTNZ01	91	5020	4766	3/26/15	2/27/17	Scaffold	SC	SAMEA773536	GCA_001220025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/025/GCA_001220025.1_5275_8_8	-	H66
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12565	39.6	-	FCSP01	40	2342	2084	2/6/16	3/13/17	Scaffold	SC	SAMEA2239089	GCA_900023745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/745/GCA_900023745.1_11860_7_50	-	2842STDY5644470
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.12053	50.4	-	JWCY01	154	5240	4915	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03197062	GCA_001052125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/125/GCA_001052125.1_ASM105212v1	26230489	11_ECOL
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.83452	50.7	-	JVZI01	272	4985	4688	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03197156	GCA_001052365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/365/GCA_001052365.1_ASM105236v1	26230489	1196_ECOL
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99371	39.8	-	FCTF01	45	2197	1937	2/6/16	3/13/17	Scaffold	SC	SAMEA2238785	GCA_900023755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/755/GCA_900023755.1_11893_1_28	-	2842STDY5644159
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95656	52.1	-	CTLP01	100	5126	4843	3/26/15	2/27/17	Scaffold	SC	SAMEA773588	GCA_001220065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/065/GCA_001220065.1_5299_3_10	-	V50
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80074	32.7	-	FGSA01	54	2905	2752	2/10/16	3/6/17	Contig	SC	SAMEA1464669	GCA_900042245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/245/GCA_900042245.1_7521_6_70	-	st1671
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.94887	32.7	-	FGSB01	65	3104	2915	2/10/16	3/5/17	Contig	SC	SAMEA1464678	GCA_900042255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/255/GCA_900042255.1_7521_6_73	-	st1690
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97505	52.1	-	CTGE01	95	5165	4881	3/26/15	2/27/17	Scaffold	SC	SAMEA1521966	GCA_001220105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/105/GCA_001220105.1_8080_3_7	-	H102
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05878	39.5	-	FCTL01	36	2276	2039	2/6/16	3/13/17	Scaffold	SC	SAMEA2238796	GCA_900023765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/765/GCA_900023765.1_11893_1_39	-	2842STDY5644170
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.87805	50.6	-	JWES01	126	4934	4648	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03197016	GCA_001052705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/705/GCA_001052705.1_ASM105270v1	26230489	105_ECOL
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.08938	50.5	-	JWAS01	366	5344	5021	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03197120	GCA_001052855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/855/GCA_001052855.1_ASM105285v1	26230489	1163_ECOL
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09447	39.5	-	FCTV01	39	2326	2078	2/6/16	3/13/17	Scaffold	SC	SAMEA2238816	GCA_900023775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/775/GCA_900023775.1_11893_1_58	-	2842STDY5644190
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.92583	52.1	-	CTMF01	77	5082	4819	3/26/15	2/27/17	Scaffold	SC	SAMEA1522033	GCA_001220125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/125/GCA_001220125.1_8080_3_91	-	V111
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84014	32.7	-	FGSC01	58	2923	2769	2/10/16	3/5/17	Contig	SC	SAMEA1464686	GCA_900042265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/265/GCA_900042265.1_7521_6_76	-	st1696
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83434	32.7	-	FGSD01	63	2934	2777	2/10/16	3/5/17	Contig	SC	SAMEA1464227	GCA_900042275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/275/GCA_900042275.1_7521_6_77	-	st1699
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95212	52.1	-	CTHH01	102	5125	4872	3/26/15	2/27/17	Scaffold	SC	SAMEA773575	GCA_001220165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/165/GCA_001220165.1_5275_2_7	-	V34
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05212	39.6	-	FCVB01	30	2257	2018	2/6/16	3/13/17	Scaffold	SC	SAMEA2382558	GCA_900023785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/785/GCA_900023785.1_12673_6_13	-	2842STDY5753098
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.7412	50.6	-	JVZD01	45	4783	4540	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03197161	GCA_001052935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/052/935/GCA_001052935.1_ASM105293v1	26230489	12_ECOL
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.96682	50.6	-	JVYG01	94	5137	4858	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03197184	GCA_001053065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/065/GCA_001053065.1_ASM105306v1	26230489	122_ECOL
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.97967	39.7	-	FCVD01	20	2176	1954	2/6/16	3/13/17	Scaffold	SC	SAMEA2238869	GCA_900023795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/795/GCA_900023795.1_11861_3_15	-	2842STDY5644244
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.93803	52.1	-	CTQX01	84	5122	4833	3/26/15	2/27/17	Scaffold	SC	SAMEA1707614	GCA_001220225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/225/GCA_001220225.1_9066_1_3	-	EWH1
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86378	32.7	-	FGSF01	60	2983	2829	2/10/16	3/6/17	Contig	SC	SAMEA1464222	GCA_900042285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/285/GCA_900042285.1_7521_6_79	-	st1703
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84506	32.7	-	FGSE01	55	2927	2769	2/10/16	3/5/17	Contig	SC	SAMEA1464421	GCA_900042295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/295/GCA_900042295.1_7521_6_80	-	st1707
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.88337	52.1	-	CTJQ01	83	5036	4774	3/26/15	2/27/17	Scaffold	SC	SAMEA1522047	GCA_001220245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/245/GCA_001220245.1_8080_3_96	-	H144
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99059	39.8	-	FCWG01	47	2190	1921	2/6/16	3/13/17	Scaffold	SC	SAMEA2238910	GCA_900023805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/805/GCA_900023805.1_11861_3_58	-	2842STDY5644285
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.08638	50.6	-	JVVR01	734	5409	5006	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03197251	GCA_001053245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/245/GCA_001053245.1_ASM105324v1	26230489	1280_ECOL
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.21509	50.7	-	JVUM01	301	5466	5152	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03197282	GCA_001053295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/295/GCA_001053295.1_ASM105329v1	26230489	1307.rep1_ECOL
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10264	39.7	-	FCWF01	51	2328	2070	2/6/16	3/13/17	Scaffold	SC	SAMEA2238914	GCA_900023815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/815/GCA_900023815.1_11861_3_62	-	2842STDY5644289
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.89564	52.1	-	CTOC01	88	5027	4787	3/26/15	2/27/17	Scaffold	SC	SAMEA773561	GCA_001220265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/265/GCA_001220265.1_5275_2_11	-	V38
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83768	32.7	-	FGSH01	49	2978	2798	2/10/16	3/5/17	Contig	SC	SAMEA1464369	GCA_900042305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/305/GCA_900042305.1_7521_6_83	-	st1711
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85622	32.7	-	FGSL01	78	2954	2797	2/10/16	3/5/17	Contig	SC	SAMEA1464383	GCA_900042315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/315/GCA_900042315.1_7521_6_85	-	st1717
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97632	52.1	-	CTNQ01	78	5159	4883	3/26/15	2/27/17	Scaffold	SC	SAMEA1522049	GCA_001220285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/285/GCA_001220285.1_8080_3_88	-	V108
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.03391	39.7	-	FCWS01	21	2254	2020	2/6/16	3/13/17	Scaffold	SC	SAMEA2238931	GCA_900023825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/825/GCA_900023825.1_11861_3_79	-	2842STDY5644306
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.20487	50.7	-	JVUL01	280	5449	5140	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03197283	GCA_001053305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/053/305/GCA_001053305.1_ASM105330v1	26230489	1307.rep2_ECOL
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.06714	50.6	-	JVYS01	151	5298	5020	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03197172	GCA_001054095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/095/GCA_001054095.1_ASM105409v1	26230489	121_ECOL
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09082	39.6	-	FCYI01	30	2276	2063	2/6/16	3/13/17	Scaffold	SC	SAMEA2382602	GCA_900023835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/835/GCA_900023835.1_12673_6_57	-	2842STDY5753142
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97502	52.1	-	CTNT01	89	5155	4877	3/26/15	2/27/17	Scaffold	SC	SAMEA1521955	GCA_001220305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/305/GCA_001220305.1_8080_3_40	-	H135
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85455	32.7	-	FFXI01	56	2944	2792	2/10/16	3/5/17	Contig	SC	SAMEA1464264	GCA_900042475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/475/GCA_900042475.1_7554_6_59	-	st255
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83	32.7	-	FGFA01	55	2927	2778	2/10/16	3/5/17	Contig	SC	SAMEA1317579	GCA_900042485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/485/GCA_900042485.1_7414_8_35	-	st585
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97694	52.1	-	CTHR01	88	5156	4879	3/26/15	2/27/17	Scaffold	SC	SAMEA1521985	GCA_001220325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/325/GCA_001220325.1_8080_3_78	-	V98
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10835	39.5	-	FDRI01	63	2282	2035	2/9/16	3/5/17	Scaffold	SC	SAMEA2239131	GCA_900023855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/855/GCA_900023855.1_11860_7_92	-	2842STDY5644513
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.96667	50.5	-	JVYB01	340	5117	4770	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03197189	GCA_001054145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/145/GCA_001054145.1_ASM105414v1	26230489	1225_ECOL
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.96989	50.6	-	JVXW01	115	5118	4865	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03197194	GCA_001054175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/175/GCA_001054175.1_ASM105417v1	26230489	123_ECOL
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04906	39.6	-	FDQX01	28	2245	2009	2/9/16	3/13/17	Scaffold	SC	SAMEA2239141	GCA_900023865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/865/GCA_900023865.1_11860_8_6	-	2842STDY5644523
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.9761	52.1	-	CTMK01	85	5155	4877	3/26/15	2/27/17	Scaffold	SC	SAMEA1522038	GCA_001220345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/345/GCA_001220345.1_8080_3_50	-	V70
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77753	32.8	-	FGPE01	24	2878	2753	2/10/16	3/5/17	Contig	SC	SAMEA1464454	GCA_900042495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/495/GCA_900042495.1_7712_8_53	-	st774
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82586	32.7	-	FGPK01	57	2929	2780	2/10/16	3/6/17	Contig	SC	SAMEA1317376	GCA_900042505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/505/GCA_900042505.1_7414_8_61	-	st902
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	5.00901	52	-	CTQT01	92	5241	4949	3/26/15	2/27/17	Scaffold	SC	SAMEA1707610	GCA_001220365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/365/GCA_001220365.1_9066_1_1	-	EWH2
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11237	39.6	-	FDUS01	37	2318	2077	2/9/16	3/13/17	Scaffold	SC	SAMEA2239274	GCA_900023875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/875/GCA_900023875.1_11861_5_49	-	2842STDY5644658
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.65028	50.8	-	JVXG01	201	4766	4560	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03197210	GCA_001054245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/245/GCA_001054245.1_ASM105424v1	26230489	1244_ECOL
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.06716	50.7	-	JVPU01	415	5367	4995	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03197404	GCA_001054615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/615/GCA_001054615.1_ASM105461v1	26230489	211_ECOL
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.984	39.8	-	FDUZ01	46	2182	1931	2/9/16	3/8/17	Scaffold	SC	SAMEA2239291	GCA_900023885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/885/GCA_900023885.1_11861_5_66	-	2842STDY5644675
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.94413	52.1	-	CTIA01	85	5109	4862	3/26/15	2/27/17	Scaffold	SC	SAMEA773514	GCA_001220385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/385/GCA_001220385.1_5275_7_6	-	H24
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85396	32.7	-	FGTD01	47	2967	2855	2/10/16	3/5/17	Contig	SC	SAMEA1317453	GCA_900042515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/515/GCA_900042515.1_7469_7_22	-	st1823
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79366	32.7	-	FGUV01	58	2882	2728	2/10/16	3/6/17	Contig	SC	SAMEA1317515	GCA_900042525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/525/GCA_900042525.1_7469_7_86	-	st2148
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.9814	52.1	-	CTGL01	76	5172	4878	3/26/15	2/27/17	Scaffold	SC	SAMEA1707601	GCA_001220405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/405/GCA_001220405.1_9065_1_12	-	EWV1
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98019	39.7	-	FDXN01	23	2205	1963	2/9/16	3/13/17	Scaffold	SC	SAMEA2238368	GCA_900023895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/895/GCA_900023895.1_12045_8_82	-	2842STDY5643737
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.04156	50.4	-	JVNT01	839	5368	4837	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03197457	GCA_001054815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/054/815/GCA_001054815.1_ASM105481v1	26230489	264_ECOL
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.12028	50.4	-	JVGA01	240	5384	4968	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03197658	GCA_001055155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/155/GCA_001055155.1_ASM105515v1	26230489	464_ECOL
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04511	39.7	-	FEBS01	24	2254	2027	2/9/16	3/5/17	Scaffold	SC	SAMEA2238554	GCA_900023905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/905/GCA_900023905.1_11860_6_88	-	2842STDY5643925
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.96678	52.1	-	CTOQ01	104	5162	4877	3/26/15	2/27/17	Scaffold	SC	SAMEA1483977	GCA_001220445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/445/GCA_001220445.1_8036_3_50	-	V118
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8704	32.7	-	FGUY01	41	2985	2837	2/10/16	3/6/17	Contig	SC	SAMEA1317455	GCA_900042535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/535/GCA_900042535.1_7469_7_89	-	st2154
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78289	32.7	-	FGUZ01	41	2867	2724	2/10/16	3/5/17	Contig	SC	SAMEA1317544	GCA_900042545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/545/GCA_900042545.1_7469_7_92	-	st2175
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.97311	52.1	-	CTLQ01	92	5165	4882	3/26/15	2/27/17	Scaffold	SC	SAMEA1484004	GCA_001220465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/465/GCA_001220465.1_8036_3_80	-	TURKEYa
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0864	39.6	-	FECF01	22	2285	2052	2/9/16	3/13/17	Scaffold	SC	SAMEA2238577	GCA_900023915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/915/GCA_900023915.1_11861_1_15	-	2842STDY5643949
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.31761	50.8	-	JVQX01	211	5629	5285	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03197375	GCA_001055685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/685/GCA_001055685.1_ASM105568v1	26230489	184_ECOL
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.13363	50.7	-	JVOT01	353	5397	5034	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03197431	GCA_001056015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/015/GCA_001056015.1_ASM105601v1	26230489	241_ECOL
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02462	39.8	-	FECI01	41	2245	2016	2/9/16	3/13/17	Scaffold	SC	SAMEA2238580	GCA_900023925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/925/GCA_900023925.1_11822_8_39	-	2842STDY5643952
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.97378	52.1	-	CTQZ01	100	5163	4886	3/26/15	2/27/17	Scaffold	SC	SAMEA1484079	GCA_001220505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/505/GCA_001220505.1_8036_3_64	-	SPAINf
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.89498	32.7	-	FGVB01	94	3015	2852	2/10/16	3/5/17	Contig	SC	SAMEA1317321	GCA_900042555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/555/GCA_900042555.1_7469_7_94	-	st2182
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80081	32.7	-	FGVF01	55	2899	2748	2/10/16	3/6/17	Contig	SC	SAMEA1469557	GCA_900042565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/565/GCA_900042565.1_7480_8_5	-	st2195
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.94247	52.1	-	CTON01	96	5106	4850	3/26/15	2/27/17	Scaffold	SC	SAMEA773526	GCA_001220525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/525/GCA_001220525.1_5295_2_1	-	H71
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13043	39.5	-	FECQ01	42	2376	2136	2/9/16	3/13/17	Scaffold	SC	SAMEA2238595	GCA_900023935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/935/GCA_900023935.1_11861_1_33	-	2842STDY5643967
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.21103	50.8	-	JVOS01	227	5516	5141	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03197432	GCA_001056025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/025/GCA_001056025.1_ASM105602v1	26230489	242_ECOL
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.09333	50.4	-	JVNS01	481	5267	4869	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03197458	GCA_001056195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/195/GCA_001056195.1_ASM105619v1	26230489	265_ECOL
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.97162	39.8	-	FEDC01	24	2155	1933	2/9/16	3/8/17	Scaffold	SC	SAMEA2238616	GCA_900023945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/945/GCA_900023945.1_11861_1_54	-	2842STDY5643988
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.94588	52.1	-	CTHT01	94	5110	4822	3/26/15	2/27/17	Scaffold	SC	SAMEA773577	GCA_001220545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/545/GCA_001220545.1_5275_2_1	-	V28
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82403	32.7	-	FGVH01	72	2926	2791	2/10/16	3/5/17	Contig	SC	SAMEA1469620	GCA_900042575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/575/GCA_900042575.1_7480_8_6	-	st2196
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82815	32.7	-	FGVI01	60	2932	2786	2/10/16	3/5/17	Contig	SC	SAMEA1469626	GCA_900042585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/585/GCA_900042585.1_7480_8_8	-	st2198
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	5.03281	52.1	-	CTNO01	108	5230	4940	3/26/15	2/27/17	Scaffold	SC	SAMEA773631	GCA_001220585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/585/GCA_001220585.1_5299_6_7	-	V57
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07194	39.7	-	FCPR01	43	2287	2059	2/6/16	3/13/17	Scaffold	SC	SAMEA2238739	GCA_900023955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/955/GCA_900023955.1_11861_2_78	-	2842STDY5644112
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.30185	50.7	-	JVNK01	282	5604	5273	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03197466	GCA_001056205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/205/GCA_001056205.1_ASM105620v1	26230489	273_ECOL
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.42025	50.7	-	JVMY01	335	5728	5387	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03197478	GCA_001056215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/215/GCA_001056215.1_ASM105621v1	26230489	284_ECOL
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10513	39.6	-	FCPX01	23	2318	2064	2/6/16	3/13/17	Scaffold	SC	SAMEA2238750	GCA_900023965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/965/GCA_900023965.1_11861_2_89	-	2842STDY5644123
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.94239	52.1	-	CTOM01	101	5100	4827	3/26/15	2/27/17	Scaffold	SC	SAMEA773632	GCA_001220625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/625/GCA_001220625.1_5295_2_10	-	H79
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87329	32.8	-	FGVG01	78	3059	2866	2/10/16	3/5/17	Contig	SC	SAMEA1469628	GCA_900042595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/595/GCA_900042595.1_7480_8_9	-	st2200
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85634	32.7	-	FGVK01	67	2974	2822	2/10/16	3/5/17	Contig	SC	SAMEA1469631	GCA_900042605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/605/GCA_900042605.1_7480_8_11	-	st2203
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.97035	52.1	-	CTOS01	88	5161	4882	3/26/15	2/27/17	Scaffold	SC	SAMEA1484089	GCA_001220645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/645/GCA_001220645.1_8036_3_67	-	SPAINb
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07482	39.6	-	FCRH01	44	2272	2018	2/6/16	3/13/17	Scaffold	SC	SAMEA2239013	GCA_900023975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/975/GCA_900023975.1_11861_4_67	-	2842STDY5644390
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.4312	50.6	-	JVHY01	193	5811	5455	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03197608	GCA_001056665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/665/GCA_001056665.1_ASM105666v1	26230489	417_ECOL
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.74489	50.7	-	JVGW01	94	4864	4618	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03197636	GCA_001056815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/815/GCA_001056815.1_ASM105681v1	26230489	444_ECOL
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06181	39.6	-	FCSI01	34	2277	2041	2/6/16	3/13/17	Scaffold	SC	SAMEA2239077	GCA_900023985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/985/GCA_900023985.1_11860_7_37	-	2842STDY5644458
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.94501	52.1	-	CTMI01	105	5114	4842	3/26/15	2/27/17	Scaffold	SC	SAMEA773562	GCA_001220665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/665/GCA_001220665.1_5299_3_2	-	V43
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81933	32.7	-	FGVJ01	67	2917	2780	2/10/16	3/5/17	Contig	SC	SAMEA1469634	GCA_900042615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/615/GCA_900042615.1_7480_8_12	-	st2205
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87015	32.7	-	FGVM01	62	3003	2824	2/10/16	3/5/17	Contig	SC	SAMEA1469664	GCA_900042625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/625/GCA_900042625.1_7480_8_15	-	st2209
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97249	52.1	-	CTMX01	82	5148	4873	3/26/15	2/27/17	Scaffold	SC	SAMEA1521972	GCA_001220685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/685/GCA_001220685.1_8080_3_33	-	H128
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00292	39.7	-	FCTI01	34	2211	1994	2/6/16	3/12/17	Scaffold	SC	SAMEA2238793	GCA_900023995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/023/995/GCA_900023995.1_11893_1_36	-	2842STDY5644167
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.7645	50.6	-	JVGL01	57	4900	4651	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03197647	GCA_001056845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/845/GCA_001056845.1_ASM105684v1	26230489	455_ECOL
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.13503	50.6	-	JVGK01	176	5356	5015	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03197648	GCA_001056875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/875/GCA_001056875.1_ASM105687v1	26230489	456_ECOL
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12498	39.6	-	FCTQ01	37	2345	2104	2/6/16	3/13/17	Scaffold	SC	SAMEA2238803	GCA_900024005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/005/GCA_900024005.1_11893_1_47	-	2842STDY5644177
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95854	52.1	-	CTKZ01	77	5128	4872	3/26/15	2/27/17	Scaffold	SC	SAMEA773499	GCA_001220705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/705/GCA_001220705.1_5275_5_10	-	V09
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81653	32.7	-	FGVU01	66	2909	2762	2/10/16	3/5/17	Contig	SC	SAMEA1469561	GCA_900042635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/635/GCA_900042635.1_7480_8_27	-	st2260
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79427	32.7	-	FGVV01	62	2893	2744	2/10/16	3/5/17	Contig	SC	SAMEA1469568	GCA_900042645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/645/GCA_900042645.1_7480_8_29	-	st2269
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.92981	52.1	-	CTOR01	76	5089	4816	3/26/15	2/27/17	Scaffold	SC	SAMEA1521960	GCA_001220725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/725/GCA_001220725.1_8080_3_94	-	V114
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09205	39.6	-	FCTR01	45	2277	2056	2/6/16	3/12/17	Scaffold	SC	SAMEA2238806	GCA_900024015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/015/GCA_900024015.1_11893_1_50	-	2842STDY5644180
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.1591	50.4	-	JVGJ01	182	5435	5005	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03197649	GCA_001056895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/056/895/GCA_001056895.1_ASM105689v1	26230489	457.rep1_ECOL
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.04712	50.5	-	JVEP01	164	5120	4796	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03197695	GCA_001057065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/065/GCA_001057065.1_ASM105706v1	26230489	502_ECOL
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10401	39.6	-	FCTY01	44	2311	2052	2/6/16	3/18/17	Scaffold	SC	SAMEA2238819	GCA_900024025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/025/GCA_900024025.1_11893_1_61	-	2842STDY5644193
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.97267	52.1	-	CTGF01	97	5168	4880	3/26/15	2/27/17	Scaffold	SC	SAMEA1484117	GCA_001220785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/785/GCA_001220785.1_8036_3_42	-	H150
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.94291	32.7	-	FGVX01	72	3096	2911	2/10/16	3/6/17	Contig	SC	SAMEA1469608	GCA_900042655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/655/GCA_900042655.1_7480_8_30	-	st2271
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84081	32.7	-	FGWA01	54	2955	2811	2/10/16	3/6/17	Contig	SC	SAMEA1469724	GCA_900042665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/665/GCA_900042665.1_7480_8_36	-	st2299
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.94928	52.1	-	CTIB01	118	5118	4823	3/26/15	2/27/17	Scaffold	SC	SAMEA773633	GCA_001220865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/865/GCA_001220865.1_5299_6_11	-	H94
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06627	39.7	-	FCTW01	32	2240	2010	2/6/16	3/13/17	Scaffold	SC	SAMEA2238817	GCA_900024035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/035/GCA_900024035.1_11893_1_59	-	2842STDY5644191
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.17525	50.7	-	JVDO01	250	5399	5091	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03197722	GCA_001057125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/125/GCA_001057125.1_ASM105712v1	26230489	527_ECOL
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.00696	50.6	-	JVCI01	226	5194	4890	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03197754	GCA_001057225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/225/GCA_001057225.1_ASM105722v1	26230489	555_ECOL
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07519	39.7	-	FCVY01	32	2256	2011	2/6/16	3/13/17	Scaffold	SC	SAMEA2238903	GCA_900024045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/045/GCA_900024045.1_11861_3_51	-	2842STDY5644278
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.97604	52.1	-	CTJY01	82	5154	4883	3/26/15	2/27/17	Scaffold	SC	SAMEA1484102	GCA_001220885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/885/GCA_001220885.1_8036_3_86	-	SPAINi
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78209	32.7	-	FGWB01	50	2864	2724	2/10/16	3/5/17	Contig	SC	SAMEA1469687	GCA_900042675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/675/GCA_900042675.1_7480_8_39	-	st2315
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83043	32.7	-	FGWD01	62	2930	2780	2/10/16	3/6/17	Contig	SC	SAMEA1469691	GCA_900042685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/685/GCA_900042685.1_7480_8_41	-	st2329
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.96645	52.1	-	CTIL01	76	5142	4867	3/26/15	2/27/17	Scaffold	SC	SAMEA1521984	GCA_001220905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/905/GCA_001220905.1_8080_3_43	-	H138
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05996	39.5	-	FCWD01	34	2269	2032	2/6/16	3/13/17	Scaffold	SC	SAMEA2238908	GCA_900024055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/055/GCA_900024055.1_11861_3_56	-	2842STDY5644283
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.91696	50.7	-	JVBH01	185	5036	4801	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03197781	GCA_001057385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/385/GCA_001057385.1_ASM105738v1	26230489	580_ECOL
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.05623	50.4	-	JVAV01	454	5235	4903	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03197793	GCA_001057445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/445/GCA_001057445.1_ASM105744v1	26230489	592_ECOL
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10737	39.6	-	FCXB01	35	2317	2074	2/6/16	3/13/17	Scaffold	SC	SAMEA2238946	GCA_900024065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/065/GCA_900024065.1_11861_3_93	-	2842STDY5644322
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.98303	52.1	-	CTID01	92	5167	4880	3/26/15	2/27/17	Scaffold	SC	SAMEA1522027	GCA_001220925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/925/GCA_001220925.1_8080_3_15	-	H110
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81274	32.7	-	FGWE01	54	2907	2763	2/10/16	3/6/17	Contig	SC	SAMEA1469694	GCA_900042695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/695/GCA_900042695.1_7480_8_42	-	st2334
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.75082	32.8	-	FGWF01	42	2855	2716	2/10/16	3/6/17	Contig	SC	SAMEA1469698	GCA_900042705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/705/GCA_900042705.1_7480_8_44	-	st2344
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.9574	52.1	-	CTPD01	78	5131	4872	3/26/15	2/27/17	Scaffold	SC	SAMEA773603	GCA_001220965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/965/GCA_001220965.1_5275_3_9	-	V66
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13506	39.5	-	FCXU01	32	2362	2130	2/6/16	3/13/17	Scaffold	SC	SAMEA2382589	GCA_900024075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/075/GCA_900024075.1_12673_6_44	-	2842STDY5753129
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.26787	50.7	-	JUYB01	354	5543	5200	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03197865	GCA_001057815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/815/GCA_001057815.1_ASM105781v1	26230489	662_ECOL
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.01588	50.5	-	JUXB01	385	5157	4826	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03197891	GCA_001057975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/057/975/GCA_001057975.1_ASM105797v1	26230489	688_ECOL
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10806	39.7	-	FDEU01	33	2350	2114	2/6/16	3/13/17	Scaffold	SC	SAMEA2382736	GCA_900024085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/085/GCA_900024085.1_12718_4_1	-	2842STDY5753278
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.88678	52.2	-	CTMV01	50	5019	4776	3/26/15	2/27/17	Scaffold	SC	SAMEA773645	GCA_001220985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/220/985/GCA_001220985.1_5275_5_2	-	V02
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87671	32.7	-	FGWH01	80	2997	2833	2/10/16	3/5/17	Contig	SC	SAMEA1464662	GCA_900042715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/715/GCA_900042715.1_7748_6_31	-	st2349
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.76307	32.7	-	FGWI01	18	2882	2723	2/10/16	3/5/17	Contig	SC	SAMEA1464382	GCA_900042725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/725/GCA_900042725.1_7748_6_33	-	st2375
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97508	52.1	-	CTNL01	80	5156	4882	3/26/15	2/27/17	Scaffold	SC	SAMEA1522005	GCA_001221005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/005/GCA_001221005.1_8080_3_48	-	V68
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98684	39.7	-	FDEW01	26	2188	1966	2/6/16	3/13/17	Scaffold	SC	SAMEA2382738	GCA_900024095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/095/GCA_900024095.1_12718_4_3	-	2842STDY5753280
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.08951	50.5	-	JUSA01	402	5419	4925	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03198022	GCA_001058555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/555/GCA_001058555.1_ASM105855v1	26230489	809_ECOL
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.8912	50.7	-	JUWP01	106	5063	4784	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03197903	GCA_001058935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/058/935/GCA_001058935.1_ASM105893v1	26230489	7_ECOL
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12475	39.6	-	FDFD01	38	2350	2108	2/6/16	3/13/17	Scaffold	SC	SAMEA2382745	GCA_900024105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/105/GCA_900024105.1_12718_4_10	-	2842STDY5753287
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.96126	52.1	-	CTHI01	123	5136	4877	3/26/15	2/27/17	Scaffold	SC	SAMEA773638	GCA_001221045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/045/GCA_001221045.1_5285_6_4	-	H40
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8562	32.7	-	FGVN01	70	2972	2824	2/10/16	3/5/17	Contig	SC	SAMEA1469699	GCA_900042735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/735/GCA_900042735.1_7480_8_17	-	st2218
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.7763	32.7	-	FFOW01	68	2862	2724	2/9/16	3/5/17	Contig	SC	SAMEA1469545	GCA_900043545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/545/GCA_900043545.1_7480_8_61	-	st2427
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.9794	52.1	-	CTQC01	105	5164	4876	3/26/15	2/27/17	Scaffold	SC	SAMEA773626	GCA_001221065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/065/GCA_001221065.1_5299_6_4	-	H88
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07575	39.6	-	FDGH01	37	2268	2040	2/6/16	3/5/17	Scaffold	SC	SAMEA2382775	GCA_900024115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/115/GCA_900024115.1_12718_4_40	-	2842STDY5753317
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.22158	50.7	-	JUTM01	362	5425	5118	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03197984	GCA_001059105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/105/GCA_001059105.1_ASM105910v1	26230489	774_ECOL
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.86516	50.6	-	JUSC01	146	4985	4731	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03198020	GCA_001059155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/155/GCA_001059155.1_ASM105915v1	26230489	806_ECOL
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10105	39.7	-	FDIQ01	28	2305	2058	2/6/16	3/15/17	Scaffold	SC	SAMEA2382838	GCA_900024125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/125/GCA_900024125.1_12718_5_8	-	2842STDY5753381
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.9601	52.1	-	CTGH01	92	5134	4875	3/26/15	2/27/17	Scaffold	SC	SAMEA773534	GCA_001221125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/125/GCA_001221125.1_5275_8_5	-	H64
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83972	32.7	-	FFPB01	37	2938	2787	2/9/16	3/5/17	Contig	SC	SAMEA1464554	GCA_900043555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/555/GCA_900043555.1_7748_6_63	-	st2729
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8638	32.7	-	FFPF01	113	3044	2882	2/9/16	3/6/17	Contig	SC	SAMEA1464593	GCA_900043575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/575/GCA_900043575.1_7564_8_39	-	st2921
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97412	52.1	-	CTML01	91	5158	4883	3/26/15	2/27/17	Scaffold	SC	SAMEA1522011	GCA_001221185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/185/GCA_001221185.1_8080_3_31	-	H126
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05519	39.7	-	FDIU01	21	2250	2024	2/6/16	3/13/17	Scaffold	SC	SAMEA2382839	GCA_900024135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/135/GCA_900024135.1_12718_5_9	-	2842STDY5753382
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.04939	50.7	-	JULS01	352	5242	4972	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03198186	GCA_001059455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/455/GCA_001059455.1_ASM105945v1	26230489	966_ECOL
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.1891	50.8	-	1-Jul	383	5422	5109	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03198180	GCA_001059655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/655/GCA_001059655.1_ASM105965v1	26230489	960_ECOL
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06305	39.7	-	FDIX01	54	2271	2015	2/6/16	3/13/17	Scaffold	SC	SAMEA2382846	GCA_900024145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/145/GCA_900024145.1_12718_5_16	-	2842STDY5753389
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97257	52.1	-	CTLB01	89	5149	4880	3/26/15	2/27/17	Scaffold	SC	SAMEA1522002	GCA_001221205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/205/GCA_001221205.1_8080_3_67	-	V87
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87511	32.6	-	FFPG01	78	2987	2825	2/9/16	3/6/17	Contig	SC	SAMEA1464626	GCA_900043585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/585/GCA_900043585.1_7564_8_66	-	st3102
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79761	32.7	-	FFPQ01	59	2884	2751	2/9/16	3/5/17	Contig	SC	SAMEA1469554	GCA_900043595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/595/GCA_900043595.1_7480_8_52	-	st2402
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.97617	52.1	-	CTMS01	90	5158	4875	3/26/15	2/27/17	Scaffold	SC	SAMEA1484055	GCA_001221225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/225/GCA_001221225.1_8036_3_71	-	FRANCEa
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10544	39.6	-	FDIV01	42	2321	2051	2/6/16	3/13/17	Scaffold	SC	SAMEA2382844	GCA_900024155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/155/GCA_900024155.1_12718_5_14	-	2842STDY5753387
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.99398	50.7	-	JULB01	340	5076	4764	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03198203	GCA_001059715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/715/GCA_001059715.1_ASM105971v1	26230489	982_ECOL
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.23191	50.5	-	JUKQ01	404	5437	5099	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03198214	GCA_001059795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/795/GCA_001059795.1_ASM105979v1	26230489	992_ECOL
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12352	39.6	-	FDKK01	34	2317	2086	2/6/16	3/13/17	Scaffold	SC	SAMEA2382889	GCA_900024165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/165/GCA_900024165.1_12718_5_59	-	2842STDY5753432
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.9168	52.1	-	CTPR01	79	5072	4828	3/26/15	2/27/17	Scaffold	SC	SAMEA773612	GCA_001221245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/245/GCA_001221245.1_5285_7_4	-	H52
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.74979	32.7	-	FFPS01	40	2828	2675	2/9/16	3/5/17	Contig	SC	SAMEA1464390	GCA_900043605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/605/GCA_900043605.1_7564_8_30	-	st2889
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80472	32.7	-	FFPT01	51	2896	2741	2/9/16	3/5/17	Contig	SC	SAMEA1464368	GCA_900043615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/615/GCA_900043615.1_7564_8_84	-	st3257
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97581	52.1	-	CTNH01	73	5161	4888	3/26/15	2/27/17	Scaffold	SC	SAMEA1522024	GCA_001221265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/265/GCA_001221265.1_8080_3_39	-	H134
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05798	39.5	-	FDME01	36	2269	2033	2/6/16	3/13/17	Scaffold	SC	SAMEA2382937	GCA_900024175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/175/GCA_900024175.1_12754_1_12	-	2842STDY5753481
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.14666	50.6	-	JVXQ01	200	5437	5117	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03197200	GCA_001062415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/415/GCA_001062415.1_ASM106241v1	26230489	1235_SBOY
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.14405	50.8	-	JVHN01	127	5406	5063	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03197619	GCA_001063395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/395/GCA_001063395.1_ASM106339v1	26230489	426_SBOY
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99171	39.8	-	FDNX01	50	2193	1931	2/6/16	3/13/17	Scaffold	SC	SAMEA2382985	GCA_900024185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/185/GCA_900024185.1_12754_1_60	-	2842STDY5753529
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97508	52.1	-	CTJZ01	85	5161	4884	3/26/15	2/27/17	Scaffold	SC	SAMEA1521976	GCA_001221285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/285/GCA_001221285.1_8080_3_19	-	H114
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	3.01689	32.6	-	FFPZ01	67	3171	3021	2/9/16	3/5/17	Contig	SC	SAMEA1464569	GCA_900043625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/625/GCA_900043625.1_7564_8_57	-	st3021
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78608	32.7	-	FFPY01	50	2894	2719	2/9/16	3/5/17	Contig	SC	SAMEA1464526	GCA_900043635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/635/GCA_900043635.1_7521_6_32	-	st1570
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95674	52.1	-	CTLG01	93	5125	4871	3/26/15	2/27/17	Scaffold	SC	SAMEA773538	GCA_001221305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/305/GCA_001221305.1_5275_8_2	-	H61
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.18065	39.6	-	FEGA01	54	2410	2180	2/9/16	3/13/17	Scaffold	SC	SAMEA2383056	GCA_900024195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/195/GCA_900024195.1_12754_2_36	-	2842STDY5753601
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.20638	50.7	-	JVDG01	202	5466	5131	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03197730	GCA_001063685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/685/GCA_001063685.1_ASM106368v1	26230489	534_SBOY
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.18834	50.7	-	JVAO01	218	5375	5001	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03197800	GCA_001063835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/835/GCA_001063835.1_ASM106383v1	26230489	60_SBOY
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.19829	39.5	-	FEGU01	41	2444	2197	2/9/16	3/13/17	Scaffold	SC	SAMEA2383076	GCA_900024205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/205/GCA_900024205.1_12754_2_56	-	2842STDY5753621
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.98222	52.1	-	CTHQ01	89	5165	4887	3/26/15	2/27/17	Scaffold	SC	SAMEA1522040	GCA_001221325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/325/GCA_001221325.1_8080_3_16	-	H111
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80153	32.7	-	FFQJ01	30	2888	2745	2/9/16	3/6/17	Contig	SC	SAMEA1568611	GCA_900043645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/645/GCA_900043645.1_8490_3_9	-	st856
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8888	32.7	-	FFQK01	66	3070	2893	2/9/16	3/5/17	Contig	SC	SAMEA1568607	GCA_900043655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/655/GCA_900043655.1_8490_3_10	-	st860
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97364	52.1	-	CTHG01	78	5153	4880	3/26/15	2/28/17	Scaffold	SC	SAMEA1521993	GCA_001221345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/345/GCA_001221345.1_8080_3_12	-	H107
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09375	39.5	-	FEIS01	38	2308	2077	2/9/16	3/13/17	Scaffold	SC	SAMEA2383126	GCA_900024215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/215/GCA_900024215.1_12754_3_11	-	2842STDY5753672
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.30205	50.8	-	JVHO01	119	5544	5194	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03197618	GCA_001064885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/885/GCA_001064885.1_ASM106488v1	26230489	425_SBOY
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.08311	50.7	-	JVFJ01	245	5284	4960	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03197675	GCA_001065165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/165/GCA_001065165.1_ASM106516v1	26230489	482_SBOY
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06528	39.7	-	FEJF01	32	2243	2007	2/9/16	3/13/17	Scaffold	SC	SAMEA2383139	GCA_900024225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/225/GCA_900024225.1_12754_3_24	-	2842STDY5753685
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	5.02687	52	-	CTOZ01	99	5230	4956	3/26/15	2/27/17	Scaffold	SC	SAMEA1484084	GCA_001221365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/365/GCA_001221365.1_8036_3_45	-	H153
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82652	32.7	-	FFUR01	52	2929	2773	2/10/16	3/6/17	Contig	SC	SAMEA1464631	GCA_900043885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/885/GCA_900043885.1_7554_6_13	-	st133
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83379	32.7	-	FFUU01	55	2930	2781	2/10/16	3/5/17	Contig	SC	SAMEA1317398	GCA_900043895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/895/GCA_900043895.1_7414_7_36	-	st86
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.91961	52.1	-	CTGP01	75	5101	4829	3/26/15	2/27/17	Scaffold	SC	SAMEA1707609	GCA_001221385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/385/GCA_001221385.1_9066_1_7	-	EWH5
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13433	39.6	-	FEKV01	37	2373	2136	2/9/16	3/13/17	Scaffold	SC	SAMEA2383181	GCA_900024235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/235/GCA_900024235.1_12754_3_66	-	2842STDY5753727
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.22153	50.7	-	JUTL01	336	5434	5120	7/10/15	2/23/17	Scaffold	University of Washington	SAMN03197985	GCA_001067225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/225/GCA_001067225.1_ASM106722v1	26230489	775_SBOY
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.08077	50.5	-	JURW01	726	5515	4945	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03198026	GCA_001067425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/425/GCA_001067425.1_ASM106742v1	26230489	812_SBOY
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98988	39.8	-	FELD01	44	2194	1939	2/9/16	3/13/17	Scaffold	SC	SAMEA2383189	GCA_900024245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/245/GCA_900024245.1_12754_3_74	-	2842STDY5753735
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.96851	52.1	-	CTQU01	103	5151	4877	3/26/15	2/27/17	Scaffold	SC	SAMEA1484046	GCA_001221405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/405/GCA_001221405.1_8036_3_41	-	H149
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8163	32.7	-	FFVC01	52	2899	2758	2/10/16	3/6/17	Contig	SC	SAMEA1317423	GCA_900043905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/905/GCA_900043905.1_7414_7_33	-	st81
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83387	32.7	-	FFVD01	51	2928	2780	2/10/16	3/5/17	Contig	SC	SAMEA1464397	GCA_900043925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/925/GCA_900043925.1_7554_6_2	-	st107
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95689	52.1	-	CTMT01	89	5123	4862	3/26/15	2/27/17	Scaffold	SC	SAMEA773498	GCA_001221425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/425/GCA_001221425.1_5275_5_9	-	V08
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0115	39.7	-	FENN01	24	2247	2013	2/9/16	3/15/17	Scaffold	SC	SAMEA2383253	GCA_900024255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/255/GCA_900024255.1_12754_4_43	-	2842STDY5753800
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	4.98301	50.5	-	JVZT01	203	5033	4767	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03197145	GCA_001076105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/105/GCA_001076105.1_ASM107610v1	26230489	1187_ECOL
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	5.15626	50.4	-	JVGI01	189	5446	5012	7/10/15	2/24/17	Scaffold	University of Washington	SAMN03197650	GCA_001076455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/455/GCA_001076455.1_ASM107645v1	26230489	457.rep2_ECOL
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0481	39.7	-	FENO01	40	2262	2028	2/9/16	3/13/17	Scaffold	SC	SAMEA2383254	GCA_900024265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/265/GCA_900024265.1_12754_4_44	-	2842STDY5753801
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.94665	52.1	-	CTJJ01	111	5116	4837	3/26/15	2/27/17	Scaffold	SC	SAMEA773628	GCA_001221445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/445/GCA_001221445.1_5299_6_6	-	H90
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8321	32.7	-	FFUY01	67	2919	2778	2/10/16	3/5/17	Contig	SC	SAMEA1317551	GCA_900043935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/935/GCA_900043935.1_7414_7_1	-	st10
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.88594	32.7	-	FFVG01	61	3028	2887	2/10/16	3/5/17	Contig	SC	SAMEA1317461	GCA_900043945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/945/GCA_900043945.1_7414_7_7	-	st27
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.94977	52.1	-	CTJM01	85	5119	4853	3/26/15	2/27/17	Scaffold	SC	SAMEA773599	GCA_001221485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/485/GCA_001221485.1_5275_6_1	-	H03
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15247	39.6	-	FEOB01	45	2357	2125	2/9/16	3/12/17	Scaffold	SC	SAMEA2674579	GCA_900024275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/275/GCA_900024275.1_14355_8_52	-	2842STDY5881839
Escherichia coli	562	PRJNA281568	281568	Proteobacteria	Gammaproteobacteria	5.18569	50.7	-	LFXT01	63	5407	5110	7/20/15	2/23/17	Scaffold	The University of Queensland	SAMN03798494	GCA_001182805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/805/GCA_001182805.1_ASM118280v1	26316639	CR48
Escherichia coli	562	PRJNA281568	281568	Proteobacteria	Gammaproteobacteria	5.21603	50.6	-	LFXU01	87	5398	5096	7/20/15	2/24/17	Scaffold	The University of Queensland	SAMN03491847	GCA_001182885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/182/885/GCA_001182885.1_ASM118288v1	26316639	SN5
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11905	39.6	-	FEOC01	32	2335	2080	2/9/16	3/6/17	Scaffold	SC	SAMEA2674593	GCA_900024285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/285/GCA_900024285.1_14355_8_66	-	2842STDY5881853
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.97055	52.1	-	CTMB01	98	5152	4872	3/26/15	2/27/17	Scaffold	SC	SAMEA1484093	GCA_001221505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/505/GCA_001221505.1_8036_3_56	-	V124
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80085	32.7	-	FFVL01	44	2892	2750	2/10/16	3/5/17	Contig	SC	SAMEA1464219	GCA_900043955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/955/GCA_900043955.1_7554_6_7	-	st118
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84654	32.7	-	FFPO01	108	2970	2812	2/9/16	3/6/17	Contig	SC	SAMEA1317352	GCA_900044095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/095/GCA_900044095.1_7469_7_20	-	st1818
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.9719	52.1	-	CTKA01	78	5153	4881	3/26/15	2/27/17	Scaffold	SC	SAMEA1521971	GCA_001221545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/545/GCA_001221545.1_8080_3_80	-	V100
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13339	39.7	-	FEOH01	35	2352	2110	2/9/16	3/13/17	Scaffold	SC	SAMEA2674605	GCA_900024295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/295/GCA_900024295.1_14355_8_78	-	2842STDY5881865
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.05672	50.7	-	LGZW01	131	5311	4964	8/3/15	2/23/17	Scaffold	FDA/CFSAN	SAMN03455796	GCA_001191315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/315/GCA_001191315.1_CFSAN026781_02-NGE.clc	26430026	CFSAN026781
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.09943	50.8	-	LGZZ01	154	5363	5024	8/3/15	2/24/17	Scaffold	FDA/CFSAN	SAMN03455792	GCA_001191375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/375/GCA_001191375.1_CFSAN026777_02-NGE.clc	26430026	CFSAN026777
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12899	39.7	-	FEOX01	46	2365	2123	2/9/16	3/13/17	Scaffold	SC	SAMEA2674667	GCA_900024305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/305/GCA_900024305.1_14412_3_45	-	2842STDY5881928
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.97579	52.1	-	CTHB01	84	5159	4886	3/26/15	2/27/17	Scaffold	SC	SAMEA1484139	GCA_001221565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/565/GCA_001221565.1_8036_3_85	-	ISRAEL
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83627	32.7	-	FFPI01	46	2968	2802	2/9/16	3/5/17	Contig	SC	SAMEA1464651	GCA_900044325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/325/GCA_900044325.1_7564_8_93	-	st3287
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77116	32.7	-	FFVE01	23	2865	2745	2/10/16	3/5/17	Contig	SC	SAMEA1464181	GCA_900044345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/345/GCA_900044345.1_7554_6_10	-	st124
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95255	52.1	-	CTFV01	86	5117	4862	3/26/15	2/28/17	Scaffold	SC	SAMEA773511	GCA_001221585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/585/GCA_001221585.1_5275_7_9	-	H20
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11828	39.6	-	FEPD01	49	2335	2079	2/9/16	3/5/17	Scaffold	SC	SAMEA2674711	GCA_900024315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/315/GCA_900024315.1_14412_3_68	-	2842STDY5881951
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.23406	50.8	-	LHCZ01	137	5551	5189	8/7/15	2/24/17	Scaffold	FDA/CFSAN	SAMN03455799	GCA_001262785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/785/GCA_001262785.1_1027-4	26430026	CFSAN026784
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.8699	50.6	-	LHCM01	108	5039	4766	8/7/15	2/24/17	Scaffold	FDA/CFSAN	SAMN03455795	GCA_001262795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/795/GCA_001262795.1_7712-3	26430026	CFSAN026780
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.19134	39.6	-	FDRL01	41	2422	2174	2/9/16	3/12/17	Scaffold	SC	SAMEA2239163	GCA_900024495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/495/GCA_900024495.1_11860_8_29	-	2842STDY5644545
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.96087	52.1	-	CTHF01	104	5138	4841	3/26/15	2/28/17	Scaffold	SC	SAMEA773581	GCA_001221605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/605/GCA_001221605.1_5299_6_10	-	H93
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82803	32.7	-	FFUS01	51	2928	2778	2/10/16	3/5/17	Contig	SC	SAMEA1464642	GCA_900044355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/355/GCA_900044355.1_7554_6_19	-	st146
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78818	32.7	-	FFVA01	46	2905	2731	2/10/16	3/5/17	Contig	SC	SAMEA1317306	GCA_900044365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/365/GCA_900044365.1_7414_7_41	-	st94
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95334	52.1	-	CTQB01	114	5120	4726	3/26/15	2/27/17	Scaffold	SC	SAMEA773622	GCA_001221625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/625/GCA_001221625.1_5275_6_11	-	H12
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1543	39.6	-	FDRE01	29	2417	2148	2/9/16	3/13/17	Scaffold	SC	SAMEA2239171	GCA_900024505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/505/GCA_900024505.1_11860_8_38	-	2842STDY5644553
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.1284	50.8	-	LHCP01	138	5446	5111	8/7/15	2/24/17	Scaffold	FDA/CFSAN	SAMN03455818	GCA_001262855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/855/GCA_001262855.1_ASM126285v1	26430026	CFSAN026803
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.1601	50.7	-	LHCQ01	109	5458	5099	8/7/15	2/24/17	Scaffold	FDA/CFSAN	SAMN03455821	GCA_001262905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/905/GCA_001262905.1_5710-2	26430026	CFSAN026806
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06253	39.6	-	FDTH01	27	2261	2036	2/9/16	3/13/17	Scaffold	SC	SAMEA2239218	GCA_900024515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/515/GCA_900024515.1_11860_8_86	-	2842STDY5644600
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97776	52.1	-	CTLR01	92	5165	4888	3/26/15	2/27/17	Scaffold	SC	SAMEA1521959	GCA_001221645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/645/GCA_001221645.1_8080_3_22	-	H117
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8143	32.7	-	FFVS01	62	2913	2762	2/10/16	3/5/17	Contig	SC	SAMEA1317384	GCA_900044375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/375/GCA_900044375.1_7414_7_39	-	st89
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82645	32.7	-	FFVH01	54	2916	2767	2/10/16	3/5/17	Contig	SC	SAMEA1317323	GCA_900044385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/385/GCA_900044385.1_7414_7_15	-	st44
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97231	52.1	-	CTOF01	80	5158	4884	3/26/15	2/27/17	Scaffold	SC	SAMEA1522019	GCA_001221685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/685/GCA_001221685.1_8080_3_64	-	V84
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1391	39.6	-	FDWZ01	42	2324	2063	2/9/16	3/13/17	Scaffold	SC	SAMEA2238351	GCA_900024525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/525/GCA_900024525.1_12045_8_80	-	2842STDY5643720
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.22092	50.5	-	LHCS01	126	5566	5189	8/7/15	2/24/17	Scaffold	FDA/CFSAN	SAMN03455823	GCA_001262935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/935/GCA_001262935.1_1932	26430026	CFSAN026808
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.08897	50.5	-	LHCW01	102	5405	5054	8/7/15	2/24/17	Scaffold	FDA/CFSAN	SAMN03455864	GCA_001263065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/263/065/GCA_001263065.1_16118-2	26430026	CFSAN026849
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00927	39.7	-	FDYP01	38	2208	1974	2/9/16	3/13/17	Scaffold	SC	SAMEA2238418	GCA_900024535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/535/GCA_900024535.1_11860_5_49	-	2842STDY5643788
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.93779	52.1	-	CTQQ01	50	5101	4839	3/26/15	2/28/17	Scaffold	SC	SAMEA1521983	GCA_001221705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/705/GCA_001221705.1_8080_3_93	-	V113
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83433	32.7	-	FFVV01	58	2931	2783	2/10/16	3/5/17	Contig	SC	SAMEA1317531	GCA_900044395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/395/GCA_900044395.1_7414_7_3	-	st12
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86323	32.7	-	FFUW01	59	2974	2824	2/10/16	3/5/17	Contig	SC	SAMEA1464179	GCA_900044405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/405/GCA_900044405.1_7554_6_11	-	st127
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95726	52.1	-	CTOI01	94	5127	4868	3/26/15	2/27/17	Scaffold	SC	SAMEA773544	GCA_001221725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/725/GCA_001221725.1_5275_1_6	-	V17
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09772	39.7	-	FEAJ01	22	2304	2080	2/9/16	3/13/17	Scaffold	SC	SAMEA2238496	GCA_900024545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/545/GCA_900024545.1_11860_6_29	-	2842STDY5643867
Escherichia coli	562	PRJEB10153	292226	Proteobacteria	Gammaproteobacteria	5.19143	50.6	-	CXXJ01	172	5464	5081	8/7/15	2/24/17	Scaffold	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498443	GCA_001268245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/245/GCA_001268245.1_1.EC2722.1	-	-
Escherichia coli	562	PRJEB10151	292224	Proteobacteria	Gammaproteobacteria	5.28219	50.4	-	CXXF01	122	5556	5177	8/7/15	2/24/17	Scaffold	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498441	GCA_001268385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/385/GCA_001268385.1_1.EC2719.1	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98966	39.8	-	FEAO01	45	2192	1922	2/9/16	3/13/17	Scaffold	SC	SAMEA2238503	GCA_900024555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/555/GCA_900024555.1_11860_6_37	-	2842STDY5643874
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.96743	52.1	-	CTOW01	79	5138	4863	3/26/15	2/27/17	Scaffold	SC	SAMEA1521987	GCA_001221745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/745/GCA_001221745.1_8080_3_75	-	V95
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8224	32.7	-	FFWL01	67	2915	2776	2/10/16	3/5/17	Contig	SC	SAMEA1317443	GCA_900044415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/415/GCA_900044415.1_7414_7_9	-	st30
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.82083	32.7	-	FFVR01	31	2914	2768	2/10/16	3/6/17	Contig	SC	SAMEA1317526	GCA_900044425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/425/GCA_900044425.1_8728_5_17	-	st102
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95222	52.1	-	CTPL01	96	5122	4852	3/26/15	2/28/17	Scaffold	SC	SAMEA773647	GCA_001221765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/765/GCA_001221765.1_5295_2_5	-	H75
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99445	39.8	-	FEAQ01	54	2198	1923	2/9/16	3/13/17	Scaffold	SC	SAMEA2238505	GCA_900024565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/565/GCA_900024565.1_11860_6_39	-	2842STDY5643876
Escherichia coli	562	PRJEB10157	292230	Proteobacteria	Gammaproteobacteria	5.5891	50.4	-	CXXY01	194	5876	5426	8/7/15	2/24/17	Scaffold	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498447	GCA_001268925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/925/GCA_001268925.1_1.EC2732.1	-	-
Escherichia coli	562	PRJEB10152	292225	Proteobacteria	Gammaproteobacteria	5.28219	50.4	-	CXWV01	122	5556	5177	8/7/15	2/24/17	Scaffold	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498442	GCA_001269045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/045/GCA_001269045.1_1.EC2721.1	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.97409	39.9	-	FEDK01	44	2171	1916	2/9/16	3/13/17	Scaffold	SC	SAMEA2238633	GCA_900024575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/575/GCA_900024575.1_11861_1_71	-	2842STDY5644005
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97278	52.1	-	CTNI01	79	5162	4881	3/26/15	2/27/17	Scaffold	SC	SAMEA1522003	GCA_001221785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/785/GCA_001221785.1_8080_3_60	-	V80
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81721	32.7	-	FFVM01	30	2936	2798	2/10/16	3/6/17	Contig	SC	SAMEA1317583	GCA_900044435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/435/GCA_900044435.1_7414_7_17	-	st48
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82447	32.7	-	FFVY01	66	2927	2771	2/10/16	3/5/17	Contig	SC	SAMEA1317521	GCA_900044445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/445/GCA_900044445.1_7414_7_21	-	st62
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.94992	52.1	-	CTPE01	108	5114	4853	3/26/15	2/28/17	Scaffold	SC	SAMEA773610	GCA_001221805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/805/GCA_001221805.1_5285_6_10	-	H46
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08888	39.5	-	FEDY01	62	2307	2033	2/9/16	3/13/17	Scaffold	SC	SAMEA2238662	GCA_900024585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/585/GCA_900024585.1_12273_1_85	-	2842STDY5644035
Escherichia coli	562	PRJEB10155	292228	Proteobacteria	Gammaproteobacteria	5.11409	50.8	-	CXXB01	86	5364	5050	8/7/15	2/24/17	Scaffold	"Laboratory of Evolutionary Bioinformatics, SNU"	SAMEA3498445	GCA_001269065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/269/065/GCA_001269065.1_1.EC2729.1	-	-
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.02142	50.6	-	CYCW01	168	5339	4960	8/22/15	2/24/17	Scaffold	SC	SAMEA1466124	GCA_001277475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/475/GCA_001277475.1_7790_1_89	-	401117_aEPEC
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11006	39.5	-	FEEA01	55	2321	2078	2/9/16	3/13/17	Scaffold	SC	SAMEA2238665	GCA_900024595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/595/GCA_900024595.1_11861_2_3	-	2842STDY5644038
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97896	52.1	-	CTLZ01	76	5155	4880	3/26/15	2/27/17	Scaffold	SC	SAMEA1521992	GCA_001221845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/845/GCA_001221845.1_8080_3_55	-	V75
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79162	32.7	-	FFYC01	63	2875	2739	2/10/16	3/5/17	Contig	SC	SAMEA1464498	GCA_900044455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/455/GCA_900044455.1_7554_6_84	-	st321
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83017	32.7	-	FFZI01	61	2930	2781	2/10/16	3/5/17	Contig	SC	SAMEA1317393	GCA_900044465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/465/GCA_900044465.1_7414_7_85	-	st470
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.98157	52.1	-	CTIF01	81	5155	4887	3/26/15	2/27/17	Scaffold	SC	SAMEA1707595	GCA_001221885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/885/GCA_001221885.1_9065_1_1	-	EWV6
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02864	39.6	-	FCRF01	48	2225	1991	2/6/16	3/13/17	Scaffold	SC	SAMEA2238992	GCA_900024605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/605/GCA_900024605.1_11861_4_46	-	2842STDY5644368
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.98861	50.6	-	CYBR01	152	5326	4950	8/22/15	2/24/17	Scaffold	SC	SAMEA1466126	GCA_001277515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/515/GCA_001277515.1_7790_1_59	-	401886_aEPEC
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.1646	50.5	-	CYAQ01	199	5556	5105	8/22/15	2/24/17	Scaffold	SC	SAMEA1466127	GCA_001277535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/535/GCA_001277535.1_7748_7_32	-	503028_aEPEC
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99131	39.8	-	FCQV01	43	2179	1930	2/6/16	3/13/17	Scaffold	SC	SAMEA2238993	GCA_900024615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/615/GCA_900024615.1_11861_4_47	-	2842STDY5644369
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.90651	52.1	-	CTOD01	103	5079	4823	3/26/15	2/27/17	Scaffold	SC	SAMEA773576	GCA_001221905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/905/GCA_001221905.1_5275_2_8	-	V35
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83794	32.7	-	FGAY01	56	2934	2777	2/10/16	3/5/17	Contig	SC	SAMEA1317431	GCA_900044475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/475/GCA_900044475.1_7414_8_47	-	st631
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.88615	32.7	-	FGAZ01	101	2995	2816	2/10/16	3/5/17	Contig	SC	SAMEA1464359	GCA_900044485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/485/GCA_900044485.1_7712_8_1	-	st633
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97417	52.1	-	CTKC01	86	5154	4884	3/26/15	2/27/17	Scaffold	SC	SAMEA1522015	GCA_001221925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/925/GCA_001221925.1_8080_3_9	-	H104
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.16652	39.6	-	FCQI01	39	2391	2146	2/6/16	3/13/17	Scaffold	SC	SAMEA2239026	GCA_900024625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/625/GCA_900024625.1_11861_4_80	-	2842STDY5644404
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.2083	50.5	-	CYBZ01	170	5627	5208	8/22/15	2/24/17	Scaffold	SC	SAMEA1466131	GCA_001277615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/615/GCA_001277615.1_7790_1_70	-	504005_aEPEC
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.16006	50.7	-	CYGS01	219	5618	5121	8/25/15	2/24/17	Scaffold	SC	SAMEA1466132	GCA_001277635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/635/GCA_001277635.1_7790_1_49	-	200708_aEPEC
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10857	39.6	-	FCSV01	49	2324	2072	2/6/16	3/13/17	Scaffold	SC	SAMEA2239097	GCA_900024635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/635/GCA_900024635.1_11860_7_58	-	2842STDY5644478
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97614	52.1	-	CTNU01	78	5165	4879	3/26/15	2/27/17	Scaffold	SC	SAMEA1522014	GCA_001221945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/945/GCA_001221945.1_8080_3_21	-	H116
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87088	32.7	-	FGCG01	45	3016	2825	2/10/16	3/5/17	Contig	SC	SAMEA1464305	GCA_900044495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/495/GCA_900044495.1_7712_8_50	-	st765
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80679	32.7	-	FGCL01	38	2898	2751	2/10/16	3/5/17	Contig	SC	SAMEA1464204	GCA_900044505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/505/GCA_900044505.1_7712_8_55	-	st778
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.97344	52.1	-	CTQS01	88	5158	4877	3/26/15	2/27/17	Scaffold	SC	SAMEA1484091	GCA_001221985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/221/985/GCA_001221985.1_8036_3_70	-	SPAINd
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10848	39.6	-	FCSJ01	47	2364	2097	2/6/16	3/13/17	Scaffold	SC	SAMEA2239087	GCA_900024645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/645/GCA_900024645.1_11860_7_48	-	2842STDY5644468
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.12111	50.7	-	CYAI01	188	5482	5030	8/22/15	2/24/17	Scaffold	SC	SAMEA1466133	GCA_001277655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/655/GCA_001277655.1_7553_7_71	-	503537_aEPEC
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.19682	50.4	-	CYBO01	159	5566	5115	8/22/15	2/24/17	Scaffold	SC	SAMEA1466136	GCA_001277715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/715/GCA_001277715.1_7790_1_58	-	401596_aEPEC
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99326	39.8	-	FCWB01	49	2193	1933	2/6/16	3/12/17	Scaffold	SC	SAMEA2238905	GCA_900024655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/655/GCA_900024655.1_11861_3_53	-	2842STDY5644280
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.97211	52.1	-	CTOB01	94	5167	4883	3/26/15	2/28/17	Scaffold	SC	SAMEA1484114	GCA_001222005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/005/GCA_001222005.1_8036_3_63	-	SPAINe
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.91097	32.7	-	FGFU01	58	3072	2877	2/10/16	3/6/17	Contig	SC	SAMEA1464697	GCA_900044515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/515/GCA_900044515.1_7712_8_74	-	st827
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.7943	32.7	-	FGQN01	24	2866	2711	2/10/16	3/5/17	Contig	SC	SAMEA1469721	GCA_900044525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/525/GCA_900044525.1_8728_5_29	-	st1230
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97588	52.1	-	CTIH01	86	5159	4879	3/26/15	2/27/17	Scaffold	SC	SAMEA1521999	GCA_001222025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/025/GCA_001222025.1_8080_3_42	-	H137
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99074	39.8	-	FCXA01	51	2191	1932	2/6/16	3/8/17	Scaffold	SC	SAMEA2382573	GCA_900024665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/665/GCA_900024665.1_12673_6_28	-	2842STDY5753113
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.01402	50.6	-	CYBT01	128	5376	4994	8/22/15	2/24/17	Scaffold	SC	SAMEA1466139	GCA_001277775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/277/775/GCA_001277775.1_7790_1_60	-	401938_aEPEC
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.28502	50.2	-	LGAZ01	186	5690	5257	9/15/15	2/24/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN03779025	GCA_001281685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/685/GCA_001281685.1_ASM128168v1	26311863	STEC 771
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13504	39.6	-	FCYH01	43	2396	2130	2/6/16	3/13/17	Scaffold	SC	SAMEA2382601	GCA_900024675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/675/GCA_900024675.1_12673_6_56	-	2842STDY5753141
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95833	52.1	-	CTNB01	137	5133	4853	3/26/15	2/27/17	Scaffold	SC	SAMEA773523	GCA_001222065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/065/GCA_001222065.1_5388_1_4	-	H29
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.94379	32.7	-	FGRC01	73	3111	2912	2/10/16	3/5/17	Contig	SC	SAMEA1464260	GCA_900044535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/535/GCA_900044535.1_7521_5_65	-	st1397
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81714	32.7	-	FGRF01	67	2902	2746	2/10/16	3/5/17	Contig	SC	SAMEA1464555	GCA_900044545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/545/GCA_900044545.1_7521_5_91	-	st1464
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95432	52.1	-	CTOT01	114	5139	4848	3/26/15	2/27/17	Scaffold	SC	SAMEA773587	GCA_001222145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/145/GCA_001222145.1_5299_3_9	-	V49
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09806	39.7	-	FCYX01	43	2285	2060	2/6/16	3/5/17	Scaffold	SC	SAMEA2674601	GCA_900024685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/685/GCA_900024685.1_14355_8_74	-	2842STDY5881861
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.30102	50.3	-	LGBJ01	181	5673	5265	9/15/15	2/24/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN03785603	GCA_001281725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/725/GCA_001281725.1_ASM128172v1	26311863	STEC 2868
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.28109	50.3	-	LGBP01	240	5647	5234	9/15/15	2/24/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN03785609	GCA_001281755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/755/GCA_001281755.1_ASM128175v1	26311863	E09/224
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10609	39.6	-	FCZI01	38	2278	2054	2/6/16	3/13/17	Scaffold	SC	SAMEA2674646	GCA_900024695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/695/GCA_900024695.1_14412_3_24	-	2842STDY5881906
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.97114	52.1	-	CTQY01	93	5150	4878	3/26/15	2/27/17	Scaffold	SC	SAMEA1484015	GCA_001222165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/165/GCA_001222165.1_8036_3_78	-	MALTAc
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83175	32.7	-	FGRI01	58	2934	2776	2/10/16	3/5/17	Contig	SC	SAMEA1464525	GCA_900044555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/555/GCA_900044555.1_7521_6_5	-	st1482
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.94707	32.7	-	FGRL01	65	3094	2900	2/10/16	3/5/17	Contig	SC	SAMEA1464414	GCA_900044565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/565/GCA_900044565.1_7521_6_8	-	st1487
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95826	52.1	-	CTJV01	77	5137	4867	3/26/15	2/27/17	Scaffold	SC	SAMEA773615	GCA_001222185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/185/GCA_001222185.1_5285_7_1	-	H49
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.16534	39.6	-	FCZK01	35	2361	2114	2/6/16	3/6/17	Scaffold	SC	SAMEA2674652	GCA_900024705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/705/GCA_900024705.1_14412_3_30	-	2842STDY5881912
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.32533	50.2	-	LGBA01	188	5715	5248	9/15/15	2/24/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN03785593	GCA_001281775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/775/GCA_001281775.1_ASM128177v1	26311863	STEC 989
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.30355	50.3	-	LGBB01	243	5703	5272	9/15/15	2/24/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN03785594	GCA_001281795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/795/GCA_001281795.1_ASM128179v1	26311863	STEC 994
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05943	39.6	-	FCZM01	40	2243	1994	2/6/16	3/12/17	Scaffold	SC	SAMEA2674658	GCA_900024715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/715/GCA_900024715.1_14412_3_36	-	2842STDY5881919
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.94437	52.1	-	CTMQ01	121	5111	4785	3/26/15	2/27/17	Scaffold	SC	SAMEA773504	GCA_001222205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/205/GCA_001222205.1_5275_1_1	-	V12
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8315	32.7	-	FGRM01	46	2931	2782	2/10/16	3/5/17	Contig	SC	SAMEA1464431	GCA_900044575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/575/GCA_900044575.1_7521_6_13	-	st1500
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82235	32.7	-	FGVO01	57	2927	2784	2/10/16	3/5/17	Contig	SC	SAMEA1469690	GCA_900044595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/595/GCA_900044595.1_7480_8_18	-	st2224
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.96034	52.1	-	CTPV01	82	5120	4863	3/26/15	2/27/17	Scaffold	SC	SAMEA773496	GCA_001222225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/225/GCA_001222225.1_5275_5_11	-	V10
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09286	39.6	-	FDBA01	36	2322	2067	2/6/16	3/15/17	Scaffold	SC	SAMEA2382637	GCA_900024725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/725/GCA_900024725.1_12673_6_92	-	2842STDY5753177
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.28207	50.2	-	LGBD01	183	5663	5243	9/15/15	2/24/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN03785596	GCA_001281845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/845/GCA_001281845.1_ASM128184v1	26311863	STEC 2075
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.31426	50.2	-	LGBE01	201	5685	5273	9/15/15	2/24/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN03785597	GCA_001281855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/855/GCA_001281855.1_ASM128185v1	26311863	STEC 2112
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04401	39.6	-	FDBL01	52	2267	2014	2/6/16	3/13/17	Scaffold	SC	SAMEA2382648	GCA_900024735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/735/GCA_900024735.1_12673_7_8	-	2842STDY5753189
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97527	52.1	-	CTGD01	90	5159	4881	3/26/15	2/27/17	Scaffold	SC	SAMEA1522035	GCA_001222245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/245/GCA_001222245.1_8080_3_52	-	V72
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80663	32.7	-	FGVP01	56	2900	2757	2/10/16	3/5/17	Contig	SC	SAMEA1469683	GCA_900044605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/605/GCA_900044605.1_7480_8_20	-	st2230
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.90608	32.7	-	FGVR01	58	3057	2881	2/10/16	3/5/17	Contig	SC	SAMEA1469686	GCA_900044615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/615/GCA_900044615.1_7480_8_21	-	st2245
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97309	52.1	-	CTIJ01	84	5150	4873	3/26/15	2/28/17	Scaffold	SC	SAMEA1522026	GCA_001222325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/325/GCA_001222325.1_8080_3_73	-	V93
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15719	39.5	-	FDBZ01	62	2354	2094	2/6/16	3/15/17	Scaffold	SC	SAMEA2382662	GCA_900024745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/745/GCA_900024745.1_12673_7_22	-	2842STDY5753203
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.33469	50.3	-	LGBF01	217	5722	5311	9/15/15	2/24/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN03785598	GCA_001281885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/885/GCA_001281885.1_ASM128188v1	26311863	STEC 2257
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.41029	50.2	-	LGBG01	230	5855	5405	9/15/15	2/24/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN03785599	GCA_001281905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/905/GCA_001281905.1_ASM128190v1	26311863	STEC 2410
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10706	39.6	-	FDCJ01	46	2326	2076	2/6/16	3/5/17	Scaffold	SC	SAMEA2382672	GCA_900024755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/755/GCA_900024755.1_12673_7_32	-	2842STDY5753213
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.99383	52.1	-	CTOP01	115	5176	4917	3/26/15	2/28/17	Scaffold	SC	SAMEA773639	GCA_001222345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/345/GCA_001222345.1_5285_6_5	-	H41
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81565	32.7	-	FGVQ01	57	2915	2761	2/10/16	3/5/17	Contig	SC	SAMEA1469723	GCA_900044625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/625/GCA_900044625.1_7480_8_24	-	st2252
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8211	32.7	-	FGVS01	85	2906	2760	2/10/16	3/5/17	Contig	SC	SAMEA1469719	GCA_900044635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/635/GCA_900044635.1_7480_8_23	-	st2251
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97493	52.1	-	CTMR01	88	5152	4878	3/26/15	2/27/17	Scaffold	SC	SAMEA1522020	GCA_001222365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/365/GCA_001222365.1_8080_3_85	-	V105
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09966	39.7	-	FDGL01	57	2335	2082	2/6/16	3/13/17	Scaffold	SC	SAMEA2382779	GCA_900024765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/765/GCA_900024765.1_12718_4_44	-	2842STDY5753321
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.34667	50.3	-	LGBI01	209	5746	5308	9/15/15	2/24/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN03785602	GCA_001281915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/915/GCA_001281915.1_ASM128191v1	26311863	STEC 2821
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.25178	50.3	-	LGBH01	204	5624	5216	9/15/15	2/24/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN03785600	GCA_001281925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/925/GCA_001281925.1_ASM128192v1	26311863	STEC 2667
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04889	39.6	-	FDKZ01	22	2232	2005	2/6/16	3/13/17	Scaffold	SC	SAMEA2382904	GCA_900024775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/775/GCA_900024775.1_12718_5_74	-	2842STDY5753447
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.93566	52.1	-	CTNG01	209	5115	4793	3/26/15	2/28/17	Scaffold	SC	SAMEA773648	GCA_001222385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/385/GCA_001222385.1_5295_2_6	-	H76
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78956	32.7	-	FFPP01	42	2869	2727	2/9/16	3/5/17	Contig	SC	SAMEA1317371	GCA_900044785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/785/GCA_900044785.1_7469_7_70	-	st2057
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80715	32.8	-	FFPN01	57	2922	2767	2/9/16	3/5/17	Contig	SC	SAMEA1469534	GCA_900044795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/795/GCA_900044795.1_7480_8_2	-	st2189
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.97194	52.1	-	CTJP01	81	5163	4878	3/26/15	2/28/17	Scaffold	SC	SAMEA1484009	GCA_001222405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/405/GCA_001222405.1_8036_3_84	-	CYPRUS
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11531	39.6	-	FDLC01	58	2299	2053	2/6/16	3/15/17	Scaffold	SC	SAMEA2382907	GCA_900024785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/785/GCA_900024785.1_12718_5_77	-	2842STDY5753450
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.40586	50.2	-	LGBK01	210	5815	5404	9/15/15	2/24/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN03785608	GCA_001281965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/965/GCA_001281965.1_ASM128196v1	26311863	E09/10
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.30335	50.3	-	LGBL01	202	5673	5242	9/15/15	2/24/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN03785604	GCA_001281985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/985/GCA_001281985.1_ASM128198v1	26311863	EPEC 287
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01965	39.7	-	FDLU01	23	2226	2004	2/6/16	3/8/17	Scaffold	SC	SAMEA2382925	GCA_900024795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/795/GCA_900024795.1_12718_5_95	-	2842STDY5753468
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.92071	52.1	-	CTMN01	79	5093	4832	3/26/15	2/27/17	Scaffold	SC	SAMEA773597	GCA_001222465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/465/GCA_001222465.1_5275_6_3	-	H05
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.90648	32.6	-	FFXN01	68	3045	2860	2/10/16	3/6/17	Contig	SC	SAMEA1464585	GCA_900044885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/885/GCA_900044885.1_7748_6_1	-	st274
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82957	32.7	-	FFXQ01	47	2925	2782	2/10/16	3/5/17	Contig	SC	SAMEA1464211	GCA_900044895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/895/GCA_900044895.1_7554_6_71	-	st292
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95361	52.1	-	CTNS01	103	5107	4801	3/26/15	2/27/17	Scaffold	SC	SAMEA773539	GCA_001222485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/485/GCA_001222485.1_5295_2_11	-	H80
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15153	39.6	-	FDLY01	33	2381	2124	2/6/16	3/13/17	Scaffold	SC	SAMEA2382930	GCA_900024805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/805/GCA_900024805.1_12754_1_5	-	2842STDY5753474
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.27877	50.3	-	LGBM01	193	5605	5214	9/15/15	2/24/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN03785605	GCA_001281995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/281/995/GCA_001281995.1_ASM128199v1	26311863	EPEC 393
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.38932	50.3	-	LGBN01	285	5762	5332	9/15/15	2/24/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN03785606	GCA_001282025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/025/GCA_001282025.1_ASM128202v1	26311863	EPEC 1572
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.03377	39.6	-	FEGG01	33	2239	2015	2/9/16	3/13/17	Scaffold	SC	SAMEA2383062	GCA_900024815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/815/GCA_900024815.1_12754_2_42	-	2842STDY5753607
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95114	52.1	-	CTPJ01	103	5133	4854	3/26/15	2/27/17	Scaffold	SC	SAMEA773519	GCA_001222505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/505/GCA_001222505.1_5388_1_8	-	H32
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78677	32.7	-	FFZG01	51	2873	2728	2/10/16	3/6/17	Contig	SC	SAMEA1317328	GCA_900044905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/905/GCA_900044905.1_7414_7_81	-	st456
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82745	32.7	-	FFZK01	69	2914	2773	2/10/16	3/5/17	Contig	SC	SAMEA1317341	GCA_900044915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/915/GCA_900044915.1_7414_7_82	-	st462
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97232	52.1	-	CTGM01	84	5149	4877	3/26/15	2/28/17	Scaffold	SC	SAMEA1522042	GCA_001222525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/525/GCA_001222525.1_8080_3_27	-	H122
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1473	39.6	-	FEGH01	49	2358	2094	2/9/16	3/6/17	Scaffold	SC	SAMEA2383063	GCA_900024825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/825/GCA_900024825.1_12754_2_43	-	2842STDY5753608
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.39584	50.3	-	LGBO01	203	5789	5347	9/15/15	2/24/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN03785607	GCA_001282035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/035/GCA_001282035.1_ASM128203v1	26311863	EPEC 1669
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.40064	50.3	-	LGBQ01	252	5813	5386	9/15/15	2/24/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN03785601	GCA_001282065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/065/GCA_001282065.1_ASM128206v1	26311863	STEC 2820
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09078	39.7	-	FEHA01	28	2319	2090	2/9/16	3/13/17	Scaffold	SC	SAMEA2383082	GCA_900024835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/835/GCA_900024835.1_12754_2_62	-	2842STDY5753627
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.96777	52.1	-	CTLW01	99	5153	4871	3/26/15	2/27/17	Scaffold	SC	SAMEA1484065	GCA_001222565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/565/GCA_001222565.1_8036_3_40	-	H148
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86428	32.7	-	FGBA01	66	2995	2826	2/10/16	3/5/17	Contig	SC	SAMEA1464344	GCA_900044925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/925/GCA_900044925.1_7564_8_6	-	st642
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78952	32.7	-	FGCK01	34	2876	2735	2/10/16	3/5/17	Contig	SC	SAMEA1464543	GCA_900044935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/935/GCA_900044935.1_7712_8_57	-	st781
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97319	52.1	-	CTJR01	85	5166	4884	3/26/15	2/27/17	Scaffold	SC	SAMEA1522034	GCA_001222585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/585/GCA_001222585.1_8080_3_18	-	H113
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.97237	39.7	-	FEHY01	29	2172	1933	2/9/16	3/13/17	Scaffold	SC	SAMEA2383106	GCA_900024845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/845/GCA_900024845.1_12754_2_86	-	2842STDY5753651
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.77363	50.5	-	CXZG01	89	5022	4676	8/22/15	2/24/17	Scaffold	SC	SAMEA1466172	GCA_001283165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/165/GCA_001283165.1_7553_7_66	-	200781_aEPEC
Escherichia coli	562	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	5.66691	50.2	-	CYGC01	249	6233	5700	8/24/15	2/24/17	Scaffold	SC	SAMEA1527970	GCA_001283185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/185/GCA_001283185.1_8205_8_77	-	G100788-1A
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98857	39.8	-	FEIA01	44	2184	1933	2/9/16	3/6/17	Scaffold	SC	SAMEA2383108	GCA_900024855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/855/GCA_900024855.1_12754_2_88	-	2842STDY5753653
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97474	52.1	-	CTQI01	80	5159	4879	3/26/15	2/27/17	Scaffold	SC	SAMEA1522006	GCA_001222605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/605/GCA_001222605.1_8080_3_63	-	V83
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78769	32.7	-	FGCQ01	42	2908	2725	2/10/16	3/5/17	Contig	SC	SAMEA1464572	GCA_900044945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/945/GCA_900044945.1_7712_8_64	-	st804
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8255	32.7	-	FGCU01	63	2928	2772	2/10/16	3/5/17	Contig	SC	SAMEA1464661	GCA_900044955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/955/GCA_900044955.1_7712_8_69	-	st816
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.96001	52.1	-	CTFX01	97	5140	4879	3/26/15	2/27/17	Scaffold	SC	SAMEA773614	GCA_001222625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/625/GCA_001222625.1_5285_7_2	-	H50
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.97797	39.7	-	FEIB01	21	2200	1961	2/9/16	3/6/17	Scaffold	SC	SAMEA2383109	GCA_900024865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/865/GCA_900024865.1_12754_2_89	-	2842STDY5753654
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.04748	50.6	-	CYBB01	176	5410	5049	8/22/15	2/24/17	Scaffold	SC	SAMEA1466114	GCA_001283265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/265/GCA_001283265.1_7748_7_47	-	703258_aEPEC
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.91656	50.8	-	CYEW01	272	5368	4906	8/24/15	2/24/17	Scaffold	SC	SAMEA1531025	GCA_001283305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/305/GCA_001283305.1_8205_3_48	-	501016
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0843	39.6	-	FEJY01	28	2290	2059	2/9/16	3/15/17	Scaffold	SC	SAMEA2383158	GCA_900024875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/875/GCA_900024875.1_12754_3_43	-	2842STDY5753704
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95982	52.1	-	CTQG01	128	5145	4853	3/26/15	2/27/17	Scaffold	SC	SAMEA773553	GCA_001222645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/645/GCA_001222645.1_5299_3_7	-	V27
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80369	32.7	-	FGDU01	40	2925	2749	2/10/16	3/5/17	Contig	SC	SAMEA1464357	GCA_900044965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/965/GCA_900044965.1_7554_6_48	-	st223
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81265	32.7	-	FGFB01	59	2912	2760	2/10/16	3/6/17	Contig	SC	SAMEA1317562	GCA_900044975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/975/GCA_900044975.1_7414_8_37	-	st593
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97335	52.1	-	CTHP01	83	5157	4880	3/26/15	2/27/17	Scaffold	SC	SAMEA1521981	GCA_001222665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/665/GCA_001222665.1_8080_3_72	-	V92
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.9924	39.8	-	FEKX01	52	2187	1931	2/9/16	3/15/17	Scaffold	SC	SAMEA2383183	GCA_900024885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/885/GCA_900024885.1_12754_3_68	-	2842STDY5753729
Escherichia coli	562	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	5.02471	50.6	-	CYFZ01	218	5429	4951	8/24/15	2/24/17	Scaffold	SC	SAMEA1528041	GCA_001283325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/325/GCA_001283325.1_8205_8_75	-	R503696
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.10003	50.6	-	CYAO01	225	5489	5086	8/22/15	2/24/17	Scaffold	SC	SAMEA1466150	GCA_001283385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/385/GCA_001283385.1_7748_7_30	-	500864_aEPEC
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11994	39.6	-	FECJ01	54	2351	2077	2/9/16	3/13/17	Scaffold	SC	SAMEA2238582	GCA_900024895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/895/GCA_900024895.1_11861_1_19	-	2842STDY5643954
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.94591	52.1	-	CTPU01	89	5116	4850	3/26/15	2/27/17	Scaffold	SC	SAMEA773527	GCA_001222705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/705/GCA_001222705.1_5295_2_9	-	H78
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80436	32.7	-	FGFC01	45	2895	2750	2/10/16	3/5/17	Contig	SC	SAMEA1317537	GCA_900044985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/985/GCA_900044985.1_7414_8_43	-	st621
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.83714	32.7	-	FGFE01	30	2935	2785	2/10/16	3/5/17	Contig	SC	SAMEA1317496	GCA_900044995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/995/GCA_900044995.1_8728_5_23	-	st630
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.93561	52.1	-	CTGY01	62	5103	4835	3/26/15	2/28/17	Scaffold	SC	SAMEA1521977	GCA_001222725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/725/GCA_001222725.1_8080_3_79	-	V99
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05884	39.5	-	FEJL01	40	2273	2038	2/9/16	3/13/17	Scaffold	SC	SAMEA2383145	GCA_900024905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/905/GCA_900024905.1_12754_3_30	-	2842STDY5753691
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.1483	50.7	-	CYCU01	213	5599	5097	8/22/15	2/24/17	Scaffold	SC	SAMEA1466176	GCA_001283545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/545/GCA_001283545.1_7790_1_82	-	201488_aEPEC
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.23292	50.5	-	CYDS01	242	5739	5200	8/22/15	2/24/17	Scaffold	SC	SAMEA1531032	GCA_001283565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/565/GCA_001283565.1_8205_3_26	-	700851
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07141	39.6	-	FEKC01	30	2294	2058	2/9/16	3/13/17	Scaffold	SC	SAMEA2383162	GCA_900024915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/915/GCA_900024915.1_12754_3_47	-	2842STDY5753708
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95639	52.1	-	CTOH01	82	5132	4871	3/26/15	2/27/17	Scaffold	SC	SAMEA773579	GCA_001222765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/765/GCA_001222765.1_5275_2_3	-	V30
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83107	32.7	-	FGFD01	64	2922	2767	2/10/16	3/5/17	Contig	SC	SAMEA1464551	GCA_900045005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/005/GCA_900045005.1_7712_8_4	-	st649
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82283	32.7	-	FGHA01	65	2908	2776	2/10/16	3/5/17	Contig	SC	SAMEA1317476	GCA_900045015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/015/GCA_900045015.1_7414_8_84	-	st953
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.9648	52.1	-	CTLA01	78	5146	4868	3/26/15	2/27/17	Scaffold	SC	SAMEA1521973	GCA_001222785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/785/GCA_001222785.1_8080_3_84	-	V104
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.1854	39.5	-	FFSU01	199	2395	2126	2/10/16	3/13/17	Scaffold	SC	SAMEA2203833	GCA_900024975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/975/GCA_900024975.1_11511_8_19	-	2245STDY5608972
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.06252	50.5	-	CYDQ01	104	5442	5062	8/22/15	2/24/17	Scaffold	SC	SAMEA1531035	GCA_001283605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/605/GCA_001283605.1_8205_3_25	-	602206
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.92762	50.7	-	CYBS01	104	5202	4869	8/22/15	2/24/17	Scaffold	SC	SAMEA1466101	GCA_001283685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/685/GCA_001283685.1_7790_1_61	-	402074_aEPEC
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.02757	39.8	-	FFTV01	38	2209	1989	2/10/16	3/12/17	Scaffold	SC	SAMEA2203864	GCA_900024985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/985/GCA_900024985.1_11657_4_27	-	2245STDY5609004
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.96891	52.1	-	CTOU01	96	5149	4875	3/26/15	2/27/17	Scaffold	SC	SAMEA1484090	GCA_001222825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/825/GCA_001222825.1_8036_3_39	-	H147
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81198	32.7	-	FGIR01	53	2900	2751	2/10/16	3/6/17	Contig	SC	SAMEA1469645	GCA_900045025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/025/GCA_900045025.1_7480_7_6	-	st1122
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81004	32.7	-	FGIT01	66	2905	2756	2/10/16	3/6/17	Contig	SC	SAMEA1469651	GCA_900045035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/035/GCA_900045035.1_7480_7_8	-	st1127
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95571	52.1	-	CTMJ01	70	5128	4871	3/26/15	2/27/17	Scaffold	SC	SAMEA773623	GCA_001222865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/865/GCA_001222865.1_5275_6_12	-	H13
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11834	39.6	-	FDSA01	38	2302	2060	2/9/16	3/12/17	Scaffold	SC	SAMEA2239174	GCA_900025065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/065/GCA_900025065.1_11860_8_41	-	2842STDY5644556
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.32341	50.5	-	CYCZ01	274	5774	5284	8/22/15	2/24/17	Scaffold	SC	SAMEA1466146	GCA_001283765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/765/GCA_001283765.1_7790_1_80	-	200959_aEPEC
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.85559	50.4	-	CYFI01	102	5154	4775	8/24/15	2/24/17	Scaffold	SC	SAMEA1531002	GCA_001283785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/785/GCA_001283785.1_8205_3_70	-	302700
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05579	39.6	-	FDSB01	37	2241	1976	2/9/16	3/6/17	Scaffold	SC	SAMEA2239152	GCA_900025075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/075/GCA_900025075.1_11860_8_18	-	2842STDY5644534
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95522	52.1	-	CTHO01	85	5124	4869	3/26/15	2/27/17	Scaffold	SC	SAMEA773578	GCA_001222885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/885/GCA_001222885.1_5275_2_2	-	V29
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.76577	32.7	-	FGIV01	77	2825	2686	2/10/16	3/5/17	Contig	SC	SAMEA1469681	GCA_900045045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/045/GCA_900045045.1_7480_7_11	-	st1136
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85667	32.7	-	FGIU01	86	2962	2811	2/10/16	3/5/17	Contig	SC	SAMEA1469705	GCA_900045055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/055/GCA_900045055.1_7480_7_12	-	st1139
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.96047	52.1	-	CTNF01	97	5135	4873	3/26/15	2/27/17	Scaffold	SC	SAMEA773552	GCA_001222905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/905/GCA_001222905.1_5275_8_1	-	H60
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11341	39.5	-	FDUR01	45	2333	2082	2/9/16	3/5/17	Scaffold	SC	SAMEA2239273	GCA_900025085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/085/GCA_900025085.1_11861_5_48	-	2842STDY5644656
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.08504	50.6	-	CYAR01	219	5456	5064	8/22/15	2/24/17	Scaffold	SC	SAMEA1466144	GCA_001283805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/805/GCA_001283805.1_7748_7_40	-	504821_aEPEC
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.78246	50.5	-	CYCN01	107	5059	4694	8/22/15	2/24/17	Scaffold	SC	SAMEA1466173	GCA_001283945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/945/GCA_001283945.1_7790_1_87	-	300814_aEPEC
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04758	39.7	-	FDXQ01	41	2270	2016	2/9/16	3/13/17	Scaffold	SC	SAMEA2238373	GCA_900025095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/095/GCA_900025095.1_11860_5_3	-	2842STDY5643743
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.94946	52.1	-	CTJX01	124	5117	4724	3/26/15	2/27/17	Scaffold	SC	SAMEA773551	GCA_001222945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/945/GCA_001222945.1_5275_1_7	-	V24
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.88626	32.7	-	FGMG01	68	3006	2848	2/10/16	3/6/17	Contig	SC	SAMEA1464716	GCA_900045065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/065/GCA_900045065.1_7521_6_3	-	st1476
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8329	32.7	-	FGOA01	53	2949	2772	2/10/16	3/6/17	Contig	SC	SAMEA1464690	GCA_900045075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/075/GCA_900045075.1_7521_6_62	-	st1655
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.97156	52.1	-	CTPI01	92	5158	4874	3/26/15	2/27/17	Scaffold	SC	SAMEA1483993	GCA_001222965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/965/GCA_001222965.1_8036_3_72	-	GREECE
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.16357	39.6	-	FDYL01	53	2382	2138	2/9/16	3/13/17	Scaffold	SC	SAMEA2238412	GCA_900025105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/105/GCA_900025105.1_11860_5_42	-	2842STDY5643782
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.86097	50.6	-	CXZF01	74	5179	4796	8/22/15	2/24/17	Scaffold	SC	SAMEA1466184	GCA_001283985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/985/GCA_001283985.1_7553_7_67	-	202521_aEPEC
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.32346	50.6	-	CXZU01	127	5681	5321	8/22/15	2/24/17	Scaffold	SC	SAMEA1466106	GCA_001284005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/005/GCA_001284005.1_7748_7_41	-	504888_aEPEC
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.03983	39.7	-	FEDD01	28	2188	1987	2/9/16	3/5/17	Scaffold	SC	SAMEA2238618	GCA_900025115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/115/GCA_900025115.1_11861_1_56	-	2842STDY5643990
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95331	52.1	-	CTNW01	84	5117	4862	3/26/15	2/27/17	Scaffold	SC	SAMEA773583	GCA_001223025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/025/GCA_001223025.1_5275_3_6	-	V62
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8338	32.7	-	FGOM01	59	2926	2782	2/10/16	3/5/17	Contig	SC	SAMEA1464570	GCA_900045095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/095/GCA_900045095.1_7554_6_15	-	st139
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83175	32.7	-	FGON01	58	2930	2785	2/10/16	3/5/17	Contig	SC	SAMEA1464584	GCA_900045105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/105/GCA_900045105.1_7554_6_42	-	st212
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.98568	52.1	-	CTNE01	94	5172	4885	3/26/15	2/27/17	Scaffold	SC	SAMEA1522022	GCA_001223045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/045/GCA_001223045.1_8080_3_1	-	H96
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08369	39.6	-	FEDE01	39	2319	2083	2/9/16	3/5/17	Scaffold	SC	SAMEA2238621	GCA_900025125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/125/GCA_900025125.1_11861_1_59	-	2842STDY5643993
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.03647	50.5	-	CYDH01	180	5393	4956	8/22/15	2/24/17	Scaffold	SC	SAMEA1530985	GCA_001284045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/045/GCA_001284045.1_8205_3_14	-	403728
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.06592	50.7	-	CYFE01	220	5472	5009	8/24/15	2/24/17	Scaffold	SC	SAMEA1530980	GCA_001284065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/065/GCA_001284065.1_8205_3_57	-	402794
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13086	39.5	-	FEDU01	39	2323	2096	2/9/16	3/13/17	Scaffold	SC	SAMEA2238653	GCA_900025135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/135/GCA_900025135.1_12273_1_84	-	2842STDY5644025
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97561	52.1	-	CTKD01	89	5158	4877	3/26/15	2/27/17	Scaffold	SC	SAMEA1521957	GCA_001223085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/085/GCA_001223085.1_8080_3_58	-	V78
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85628	32.7	-	FGOR01	44	3015	2826	2/10/16	3/5/17	Contig	SC	SAMEA1464530	GCA_900045115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/115/GCA_900045115.1_7748_6_2	-	st278
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.89947	32.7	-	FGQZ01	51	3047	2857	2/10/16	3/5/17	Contig	SC	SAMEA1464253	GCA_900045125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/125/GCA_900045125.1_7521_5_57	-	st1379
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.94537	52.1	-	CTLC01	118	5118	4852	3/26/15	2/27/17	Scaffold	SC	SAMEA773606	GCA_001223105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/105/GCA_001223105.1_5285_7_6	-	H54
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04408	39.7	-	FEEB01	43	2252	2033	2/9/16	3/13/17	Scaffold	SC	SAMEA2238667	GCA_900025145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/145/GCA_900025145.1_11861_2_5	-	2842STDY5644040
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.96526	50.7	-	CYEY01	134	5280	4875	8/24/15	2/24/17	Scaffold	SC	SAMEA1531043	GCA_001284105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/105/GCA_001284105.1_8205_3_63	-	302613
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.06929	50.5	-	CYDZ01	29	4180	3960	8/22/15	2/24/17	Scaffold	SC	SAMEA1530991	GCA_001284165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/165/GCA_001284165.1_8205_3_33	-	402078
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06093	39.7	-	FEFQ01	50	2285	2023	2/9/16	3/13/17	Scaffold	SC	SAMEA2382549	GCA_900025155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/155/GCA_900025155.1_12673_6_4	-	2842STDY5753089
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97286	52.1	-	CTPT01	89	5155	4877	3/26/15	2/28/17	Scaffold	SC	SAMEA1521997	GCA_001223125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/125/GCA_001223125.1_8080_3_28	-	H123
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8197	32.7	-	FGRT01	62	2914	2760	2/10/16	3/5/17	Contig	SC	SAMEA1464488	GCA_900045135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/135/GCA_900045135.1_7521_6_35	-	st1581
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.74417	32.7	-	FGTT01	43	2808	2672	2/10/16	3/5/17	Contig	SC	SAMEA1317438	GCA_900045155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/155/GCA_900045155.1_7469_7_47	-	st1932
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97719	52.1	-	CTPK01	83	5163	4886	3/26/15	2/27/17	Scaffold	SC	SAMEA1521967	GCA_001223165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/165/GCA_001223165.1_8080_3_23	-	H118
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99449	39.7	-	FCQS01	39	2213	1987	2/6/16	3/13/17	Scaffold	SC	SAMEA2239004	GCA_900025165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/165/GCA_900025165.1_11861_4_58	-	2842STDY5644380
Escherichia coli	562	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	5.19024	50.6	-	CYFV01	175	5625	5213	8/24/15	2/24/17	Scaffold	SC	SAMEA1527992	GCA_001284225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/225/GCA_001284225.1_8205_8_70	-	G400871
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.86209	50.6	-	CYCP01	89	5048	4762	8/22/15	2/24/17	Scaffold	SC	SAMEA1466180	GCA_001284245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/245/GCA_001284245.1_7790_1_93	-	402097_aEPEC
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08986	39.6	-	FCRV01	32	2295	2049	2/6/16	3/13/17	Scaffold	SC	SAMEA2239053	GCA_900025175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/175/GCA_900025175.1_11860_7_12	-	2842STDY5644433
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.94872	52.1	-	CTMM01	77	5109	4856	3/26/15	2/27/17	Scaffold	SC	SAMEA773571	GCA_001223185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/185/GCA_001223185.1_5275_2_9	-	V36
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84893	32.7	-	FGWK01	65	2952	2796	2/10/16	3/5/17	Contig	SC	SAMEA1469632	GCA_900045165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/165/GCA_900045165.1_7480_8_50	-	st2396
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82709	32.7	-	FGWV01	56	2939	2770	2/10/16	3/5/17	Contig	SC	SAMEA1469670	GCA_900045175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/175/GCA_900045175.1_7480_8_65	-	st2445
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.9664	52.1	-	CTPP01	73	5144	4868	3/26/15	2/28/17	Scaffold	SC	SAMEA1522008	GCA_001223205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/205/GCA_001223205.1_8080_3_68	-	V88
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07434	39.6	-	FCQD01	26	2303	2049	2/6/16	3/13/17	Scaffold	SC	SAMEA2238780	GCA_900025185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/185/GCA_900025185.1_11893_1_23	-	2842STDY5644154
Escherichia coli	562	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	5.20419	50.6	-	CYGG01	273	5727	5161	8/24/15	2/24/17	Scaffold	SC	SAMEA1527991	GCA_001284325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/325/GCA_001284325.1_8205_8_80	-	G702074-1
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.09399	50.6	-	CYFA01	177	5464	5059	8/24/15	2/24/17	Scaffold	SC	SAMEA1531068	GCA_001284345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/345/GCA_001284345.1_8205_3_61	-	500095
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05053	39.6	-	FCTP01	28	2258	2018	2/6/16	3/13/17	Scaffold	SC	SAMEA2238799	GCA_900025195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/195/GCA_900025195.1_11893_1_42	-	2842STDY5644173
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.91986	52.1	-	CTNN01	67	5071	4828	3/26/15	2/27/17	Scaffold	SC	SAMEA773502	GCA_001223225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/225/GCA_001223225.1_5275_5_5	-	V05
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85131	32.6	-	FGXL01	69	2962	2805	2/10/16	3/5/17	Contig	SC	SAMEA1469674	GCA_900045185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/185/GCA_900045185.1_7480_8_87	-	st2533
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86356	32.6	-	FGXK01	75	2967	2802	2/10/16	3/5/17	Contig	SC	SAMEA1469671	GCA_900045195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/195/GCA_900045195.1_7480_8_89	-	st2540
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97645	52.1	-	CTLU01	87	5167	4897	3/26/15	2/28/17	Scaffold	SC	SAMEA773609	GCA_001223245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/245/GCA_001223245.1_5285_6_11	-	H47
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05922	39.5	-	FCTK01	33	2273	2041	2/6/16	3/6/17	Scaffold	SC	SAMEA2238795	GCA_900025205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/205/GCA_900025205.1_11893_1_38	-	2842STDY5644169
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.81156	50.7	-	CYEN01	96	5083	4761	8/24/15	2/24/17	Scaffold	SC	SAMEA1531044	GCA_001284385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/385/GCA_001284385.1_8205_3_52	-	401352
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.10564	50.5	-	CYFD01	199	5441	4981	8/24/15	2/24/17	Scaffold	SC	SAMEA1530986	GCA_001284405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/405/GCA_001284405.1_8205_3_59	-	403523
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04332	39.8	-	FCWI01	24	2306	2059	2/6/16	3/6/17	Scaffold	SC	SAMEA2238917	GCA_900025215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/215/GCA_900025215.1_11861_3_65	-	2842STDY5644292
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.97401	52.1	-	CTHK01	99	5163	4885	3/26/15	2/27/17	Scaffold	SC	SAMEA1484012	GCA_001223265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/265/GCA_001223265.1_8036_3_77	-	MALTAb
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77222	32.6	-	FGXN01	60	2854	2704	2/10/16	3/6/17	Contig	SC	SAMEA1469665	GCA_900045205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/205/GCA_900045205.1_7480_8_92	-	st2550
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86239	32.7	-	FGXR01	63	2988	2835	2/10/16	3/5/17	Contig	SC	SAMEA1464332	GCA_900045215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/215/GCA_900045215.1_7748_6_35	-	st2574
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97405	52.1	-	CTNK01	78	5146	4874	3/26/15	2/28/17	Scaffold	SC	SAMEA1521965	GCA_001223285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/285/GCA_001223285.1_8080_3_90	-	V110
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05378	39.6	-	FCWV01	30	2265	2024	2/6/16	3/13/17	Scaffold	SC	SAMEA2238941	GCA_900025225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/225/GCA_900025225.1_11861_3_88	-	2842STDY5644316
Escherichia coli	562	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	5.1341	50.5	-	CYGD01	122	5496	5123	8/24/15	2/24/17	Scaffold	SC	SAMEA1527956	GCA_001284425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/425/GCA_001284425.1_8205_8_85	-	R302583-2B
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.21168	50.6	-	CYFQ01	167	5600	5195	8/24/15	2/24/17	Scaffold	SC	SAMEA1531031	GCA_001284485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/485/GCA_001284485.1_8205_3_8	-	401553
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0154	39.7	-	FCYW01	25	2251	2008	2/6/16	3/12/17	Scaffold	SC	SAMEA2674598	GCA_900025235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/235/GCA_900025235.1_14355_8_71	-	2842STDY5881858
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.94619	52.1	-	CTGT01	115	5098	4816	3/26/15	2/28/17	Scaffold	SC	SAMEA773624	GCA_001223305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/305/GCA_001223305.1_5275_7_1	-	H14
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80478	32.7	-	FGXU01	44	2901	2744	2/10/16	3/5/17	Contig	SC	SAMEA1464714	GCA_900045225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/225/GCA_900045225.1_7748_6_43	-	st2591
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.7947	32.7	-	FGXW01	26	2883	2729	2/10/16	3/5/17	Contig	SC	SAMEA1464704	GCA_900045245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/245/GCA_900045245.1_8728_5_37	-	st2604
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.96721	52.1	-	CTGJ01	153	5126	4846	3/26/15	2/28/17	Scaffold	SC	SAMEA773595	GCA_001223325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/325/GCA_001223325.1_5299_6_1	-	H82
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11526	39.6	-	FDAR01	26	2324	2081	2/6/16	3/12/17	Scaffold	SC	SAMEA2382628	GCA_900025245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/245/GCA_900025245.1_12673_6_83	-	2842STDY5753168
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.21483	50.6	-	CYDN01	271	5691	5158	8/22/15	2/24/17	Scaffold	SC	SAMEA1531048	GCA_001284585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/585/GCA_001284585.1_8205_3_2	-	202387
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.27763	50.4	-	CYEU01	114	5603	5176	8/24/15	2/24/17	Scaffold	SC	SAMEA1531066	GCA_001284625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/625/GCA_001284625.1_8205_3_62	-	703063
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15268	39.6	-	FDBV01	33	2381	2126	2/6/16	3/15/17	Scaffold	SC	SAMEA2382658	GCA_900025255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/255/GCA_900025255.1_12673_7_18	-	2842STDY5753199
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.87683	52.1	-	CTPQ01	87	5030	4767	3/26/15	2/28/17	Scaffold	SC	SAMEA1521991	GCA_001223365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/365/GCA_001223365.1_8080_3_70	-	V90
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83505	32.7	-	FGXX01	37	2931	2776	2/10/16	3/5/17	Contig	SC	SAMEA1464620	GCA_900045255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/255/GCA_900045255.1_7748_6_49	-	st2639
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8044	32.7	-	FGXY01	35	2900	2748	2/10/16	3/5/17	Contig	SC	SAMEA1464694	GCA_900045265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/265/GCA_900045265.1_7748_6_47	-	st2613
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	5.04232	52.1	-	CTGI01	88	5238	4969	3/26/15	2/27/17	Scaffold	SC	SAMEA773572	GCA_001223405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/405/GCA_001223405.1_5275_2_10	-	V37
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99236	39.7	-	FDCX01	33	2190	1935	2/6/16	3/13/17	Scaffold	SC	SAMEA2382686	GCA_900025265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/265/GCA_900025265.1_12673_7_46	-	2842STDY5753227
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.01745	50.5	-	CYDE01	138	5361	4897	8/22/15	2/24/17	Scaffold	SC	SAMEA1531004	GCA_001284705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/705/GCA_001284705.1_8205_3_17	-	500989
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.4253	50.4	-	CYBJ01	181	5807	5349	8/22/15	2/24/17	Scaffold	SC	SAMEA1466145	GCA_001284825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/825/GCA_001284825.1_7790_1_50	-	200758_aEPEC
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11954	39.6	-	FDDS01	42	2319	2067	2/6/16	3/8/17	Scaffold	SC	SAMEA2382707	GCA_900025275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/275/GCA_900025275.1_12673_7_67	-	2842STDY5753248
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95451	52.1	-	CTLT01	85	5128	4872	3/26/15	2/27/17	Scaffold	SC	SAMEA773620	GCA_001223445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/445/GCA_001223445.1_5275_6_9	-	H10
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86848	32.7	-	FFPE01	51	2984	2828	2/9/16	3/5/17	Contig	SC	SAMEA1464586	GCA_900045475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/475/GCA_900045475.1_7564_8_48	-	st2954
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84954	32.7	-	FFVF01	60	2962	2814	2/10/16	3/5/17	Contig	SC	SAMEA1464229	GCA_900045495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/495/GCA_900045495.1_7554_6_8	-	st120
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.96012	52.1	-	CTGR01	100	5132	4870	3/26/15	2/28/17	Scaffold	SC	SAMEA773530	GCA_001223465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/465/GCA_001223465.1_5275_8_12	-	H70
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15985	39.5	-	FDEB01	34	2389	2127	2/6/16	3/13/17	Scaffold	SC	SAMEA2382717	GCA_900025285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/285/GCA_900025285.1_12673_7_77	-	2842STDY5753258
Escherichia coli	562	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.92552	50.6	-	CYGE01	141	5273	4801	8/24/15	2/24/17	Scaffold	SC	SAMEA1528013	GCA_001284845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/845/GCA_001284845.1_8205_8_83	-	R203092-3B
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.27041	50.6	-	CYFJ01	115	5595	5239	8/24/15	2/24/17	Scaffold	SC	SAMEA1530990	GCA_001284865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/865/GCA_001284865.1_8205_3_72	-	503320
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.03775	39.7	-	FDJF01	21	2246	2023	2/6/16	3/13/17	Scaffold	SC	SAMEA2382854	GCA_900025295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/295/GCA_900025295.1_12718_5_24	-	2842STDY5753397
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.96776	52.1	-	CTIE01	98	5159	4880	3/26/15	2/27/17	Scaffold	SC	SAMEA1484002	GCA_001223505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/505/GCA_001223505.1_8036_3_81	-	TURKEYb
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86326	32.7	-	FFVK01	50	3006	2824	2/10/16	3/5/17	Contig	SC	SAMEA1317490	GCA_900045515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/515/GCA_900045515.1_7414_7_30	-	st76
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8315	32.7	-	FFVO01	61	2932	2782	2/10/16	3/5/17	Contig	SC	SAMEA1317356	GCA_900045525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/525/GCA_900045525.1_7414_7_38	-	st88
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2215	203958	Proteobacteria	Gammaproteobacteria	4.96426	52.1	-	CTQD01	81	5145	4867	3/26/15	2/27/17	Scaffold	SC	SAMEA1483976	GCA_001223545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/545/GCA_001223545.1_8036_3_49	-	V117
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10455	39.6	-	FDJQ01	35	2306	2049	2/6/16	3/13/17	Scaffold	SC	SAMEA2382868	GCA_900025305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/305/GCA_900025305.1_12718_5_38	-	2842STDY5753411
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.22033	50.7	-	CYDM01	259	5662	5179	8/22/15	2/24/17	Scaffold	SC	SAMEA1531005	GCA_001284885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/885/GCA_001284885.1_8205_3_19	-	504180
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.20127	50.5	-	CYDL01	134	5611	5188	8/22/15	2/24/17	Scaffold	SC	SAMEA1531021	GCA_001284945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/945/GCA_001284945.1_8205_3_21	-	504528
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06227	39.7	-	FDLA01	43	2270	2020	2/6/16	3/13/17	Scaffold	SC	SAMEA2382905	GCA_900025315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/315/GCA_900025315.1_12718_5_75	-	2842STDY5753448
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74026	51.9	-	CUYY01	61	4918	4542	4/2/15	2/28/17	Scaffold	SC	SAMEA2143650	GCA_001239745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/745/GCA_001239745.1_10425_1_21	-	dtc116
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.88538	32.7	-	FFVU01	81	3091	2902	2/10/16	3/5/17	Contig	SC	SAMEA1317527	GCA_900045535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/535/GCA_900045535.1_7414_7_18	-	st51
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8318	32.7	-	FFVP01	67	2934	2779	2/10/16	3/5/17	Contig	SC	SAMEA1317492	GCA_900045545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/545/GCA_900045545.1_7414_7_29	-	st75
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.02977	51.8	-	CUZT01	70	5258	4860	4/2/15	2/28/17	Scaffold	SC	SAMEA2163197	GCA_001239765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/765/GCA_001239765.1_10425_1_18	-	dn63
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09042	39.7	-	FDMP01	25	2326	2092	2/6/16	3/13/17	Scaffold	SC	SAMEA2382949	GCA_900025325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/325/GCA_900025325.1_12754_1_24	-	2842STDY5753493
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.09922	50.4	-	CYDJ01	108	5397	5053	8/22/15	2/24/17	Scaffold	SC	SAMEA1531015	GCA_001284985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/985/GCA_001284985.1_8205_3_20	-	504324
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.17343	50.6	-	CYDK01	130	5557	5156	8/22/15	2/24/17	Scaffold	SC	SAMEA1531030	GCA_001285005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/005/GCA_001285005.1_8205_3_22	-	504718
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08295	39.6	-	FEGC01	38	2262	2040	2/9/16	3/13/17	Scaffold	SC	SAMEA2383059	GCA_900025335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/335/GCA_900025335.1_12754_2_39	-	2842STDY5753604
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93107	51.8	-	CUZP01	65	5122	4740	4/2/15	2/28/17	Scaffold	SC	SAMEA2144570	GCA_001239785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/785/GCA_001239785.1_10425_1_57	-	ct1-34
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83479	32.7	-	FFWD01	56	2935	2786	2/10/16	3/6/17	Contig	SC	SAMEA1464656	GCA_900045555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/555/GCA_900045555.1_7554_6_17	-	st144
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.96816	32.6	-	FFVX01	58	3124	2942	2/10/16	3/5/17	Contig	SC	SAMEA1464200	GCA_900045565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/565/GCA_900045565.1_7554_6_5	-	st112B
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.84656	52	-	CUZD01	57	5056	4673	4/2/15	2/28/17	Scaffold	SC	SAMEA2156128	GCA_001239825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/825/GCA_001239825.1_10425_1_70	-	ty2-32
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06198	39.5	-	FEGO01	41	2293	2040	2/9/16	3/13/17	Scaffold	SC	SAMEA2383070	GCA_900025345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/345/GCA_900025345.1_12754_2_50	-	2842STDY5753615
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.87414	50.4	-	CYBF01	456	6600	5954	8/22/15	2/24/17	Scaffold	SC	SAMEA1466202	GCA_001285025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/025/GCA_001285025.1_7748_7_46	-	702161
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.21958	50.5	-	CYDA01	111	5605	5237	8/22/15	2/24/17	Scaffold	SC	SAMEA1531056	GCA_001285085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/085/GCA_001285085.1_8205_3_12	-	403066
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01512	39.8	-	FEHX01	22	2248	2008	2/9/16	3/12/17	Scaffold	SC	SAMEA2383105	GCA_900025355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/355/GCA_900025355.1_12754_2_85	-	2842STDY5753650
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72287	52	-	CUYM01	55	4897	4513	4/2/15	2/28/17	Scaffold	SC	SAMEA2142317	GCA_001239845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/845/GCA_001239845.1_10425_1_58	-	ipt41
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81969	32.7	-	FFVT01	63	2905	2765	2/10/16	3/5/17	Contig	SC	SAMEA1317581	GCA_900045575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/575/GCA_900045575.1_7414_7_44	-	st101
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82966	32.7	-	FFWJ01	40	2944	2773	2/10/16	3/5/17	Contig	SC	SAMEA1464611	GCA_900045585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/585/GCA_900045585.1_7554_6_16	-	st140
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93327	51.8	-	CUZX01	72	5135	4742	4/2/15	2/28/17	Scaffold	SC	SAMEA2158578	GCA_001239865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/865/GCA_001239865.1_10425_1_45	-	ct1-17
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04513	39.6	-	FEJO01	33	2214	1989	2/9/16	3/13/17	Scaffold	SC	SAMEA2383148	GCA_900025365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/365/GCA_900025365.1_12754_3_33	-	2842STDY5753694
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.31545	50.4	-	CYAN01	202	5826	5340	8/22/15	2/24/17	Scaffold	SC	SAMEA1466167	GCA_001285125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/125/GCA_001285125.1_7553_7_72	-	504925
Escherichia coli	562	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.92823	50.6	-	CYGB01	128	5250	4805	8/24/15	2/24/17	Scaffold	SC	SAMEA1527975	GCA_001285165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/165/GCA_001285165.1_8205_8_82	-	R203092-3A
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05288	39.8	-	FEJM01	21	2299	2067	2/9/16	3/13/17	Scaffold	SC	SAMEA2383146	GCA_900025375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/375/GCA_900025375.1_12754_3_31	-	2842STDY5753692
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93078	51.8	-	CUYL01	53	5131	4744	4/2/15	2/28/17	Scaffold	SC	SAMEA2143432	GCA_001239885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/885/GCA_001239885.1_10425_1_8	-	dtc153
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86524	32.7	-	FFWB01	57	3009	2829	2/10/16	3/5/17	Contig	SC	SAMEA1317487	GCA_900045595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/595/GCA_900045595.1_7414_7_6	-	st24
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78148	32.7	-	FFWG01	57	2873	2723	2/10/16	3/5/17	Contig	SC	SAMEA1464605	GCA_900045605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/605/GCA_900045605.1_7554_6_14	-	st134
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74004	52.1	-	CUZF01	58	4928	4560	4/2/15	2/28/17	Scaffold	SC	SAMEA2159128	GCA_001239905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/905/GCA_001239905.1_10425_1_93	-	ty2-86
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.97435	39.7	-	FEJP01	27	2169	1931	2/9/16	3/13/17	Scaffold	SC	SAMEA2383149	GCA_900025385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/385/GCA_900025385.1_12754_3_34	-	2842STDY5753695
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.83176	50.7	-	CYBC01	74	5043	4750	8/22/15	2/24/17	Scaffold	SC	SAMEA1466179	GCA_001285185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/185/GCA_001285185.1_7748_7_6	-	102485_aEPEC
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.93471	50.7	-	CYFP01	152	5238	4821	8/24/15	2/24/17	Scaffold	SC	SAMEA1531046	GCA_001285205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/205/GCA_001285205.1_8205_3_78	-	G302551
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02014	39.7	-	FEKT01	26	2236	2011	2/9/16	3/6/17	Scaffold	SC	SAMEA2383179	GCA_900025395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/395/GCA_900025395.1_12754_3_64	-	2842STDY5753725
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81696	51.9	-	CUZJ01	55	4998	4629	4/2/15	2/28/17	Scaffold	SC	SAMEA2160568	GCA_001239925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/925/GCA_001239925.1_10425_1_26	-	dn162
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86537	32.7	-	FFWK01	43	3006	2828	2/10/16	3/5/17	Contig	SC	SAMEA1464404	GCA_900045615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/615/GCA_900045615.1_7554_6_23	-	st166
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8653	32.7	-	FFWH01	42	2998	2825	2/10/16	3/5/17	Contig	SC	SAMEA1464415	GCA_900045625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/625/GCA_900045625.1_7554_6_25	-	st169
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9326	51.8	-	CUZG01	69	5128	4750	4/2/15	2/28/17	Scaffold	SC	SAMEA1965285	GCA_001239945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/945/GCA_001239945.1_10425_1_42	-	ct1-40
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05512	39.6	-	FEKU01	33	2270	2021	2/9/16	3/5/17	Scaffold	SC	SAMEA2383180	GCA_900025405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/405/GCA_900025405.1_12754_3_65	-	2842STDY5753726
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.09743	50.5	-	CYAJ01	179	5469	5060	8/22/15	2/24/17	Scaffold	SC	SAMEA1466203	GCA_001285225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/225/GCA_001285225.1_7748_7_11	-	202423_aEPEC
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.14975	50.6	-	CYDI01	224	5553	5086	8/22/15	2/24/17	Scaffold	SC	SAMEA1530999	GCA_001285245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/245/GCA_001285245.1_8205_3_18	-	503331
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11761	39.6	-	FENM01	45	2338	2081	2/9/16	3/13/17	Scaffold	SC	SAMEA2383252	GCA_900025415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/415/GCA_900025415.1_12754_4_42	-	2842STDY5753799
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81786	51.9	-	CUYW01	58	5029	4628	4/2/15	2/28/17	Scaffold	SC	SAMEA2153899	GCA_001239965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/965/GCA_001239965.1_10425_1_33	-	dn189
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86458	32.7	-	FFWN01	48	2999	2820	2/10/16	3/5/17	Contig	SC	SAMEA1464433	GCA_900045635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/635/GCA_900045635.1_7554_6_28	-	st175
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.90401	32.7	-	FFWW01	56	3063	2877	2/10/16	3/5/17	Contig	SC	SAMEA1464681	GCA_900045645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/645/GCA_900045645.1_7554_6_41	-	st211
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.80547	52.1	-	CUZA01	58	5006	4634	4/2/15	2/28/17	Scaffold	SC	SAMEA2147482	GCA_001240005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/005/GCA_001240005.1_10425_1_76	-	ty2-80
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10546	39.6	-	FEOR01	37	2283	2054	2/9/16	3/13/17	Scaffold	SC	SAMEA2674647	GCA_900025425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/425/GCA_900025425.1_14412_3_25	-	2842STDY5881907
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.2649	50.5	-	CYEO01	221	5722	5203	8/24/15	2/24/17	Scaffold	SC	SAMEA1531023	GCA_001285285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/285/GCA_001285285.1_8205_3_42	-	703753
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.19151	50.5	-	CYES01	140	5584	5172	8/24/15	2/24/17	Scaffold	SC	SAMEA1531039	GCA_001285305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/305/GCA_001285305.1_8205_3_50	-	503256
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11121	39.6	-	FDSF01	56	2320	2064	2/9/16	3/13/17	Scaffold	SC	SAMEA2239110	GCA_900025785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/785/GCA_900025785.1_11860_7_71	-	2842STDY5644491
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93162	51.8	-	CUZS01	67	5139	4752	4/2/15	2/28/17	Scaffold	SC	SAMEA2156967	GCA_001240025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/025/GCA_001240025.1_10425_1_17	-	dtc79
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.75364	32.7	-	FFWZ01	45	2811	2677	2/10/16	3/5/17	Contig	SC	SAMEA1464507	GCA_900045655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/655/GCA_900045655.1_7554_6_44	-	st214
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83254	32.7	-	FFXB01	59	2929	2782	2/10/16	3/5/17	Contig	SC	SAMEA1464473	GCA_900045665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/665/GCA_900045665.1_7554_6_47	-	st219
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93226	51.8	-	CUZY01	70	5134	4743	4/2/15	2/28/17	Scaffold	SC	SAMEA2142982	GCA_001240045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/045/GCA_001240045.1_10425_1_51	-	ct1-3
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00328	39.7	-	FDYR01	36	2207	1998	2/9/16	3/13/17	Scaffold	SC	SAMEA2238420	GCA_900025795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/795/GCA_900025795.1_11860_5_51	-	2842STDY5643790
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.08164	50.5	-	CYAP01	215	5468	5076	8/22/15	2/24/17	Scaffold	SC	SAMEA1466118	GCA_001285325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/325/GCA_001285325.1_7748_7_23	-	402654_aEPEC
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.95905	50.6	-	CYFF01	111	5247	4924	8/24/15	2/24/17	Scaffold	SC	SAMEA1531024	GCA_001285365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/365/GCA_001285365.1_8205_3_7	-	302302
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11704	39.6	-	FDYQ01	49	2372	2102	2/9/16	3/13/17	Scaffold	SC	SAMEA2238419	GCA_900025805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/805/GCA_900025805.1_11860_5_50	-	2842STDY5643789
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93138	51.8	-	CUZN01	67	5129	4746	4/2/15	2/28/17	Scaffold	SC	SAMEA2159253	GCA_001240065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/065/GCA_001240065.1_10425_1_55	-	ct1-102
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78798	32.7	-	FFXH01	53	2877	2725	2/10/16	3/5/17	Contig	SC	SAMEA1464272	GCA_900045675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/675/GCA_900045675.1_7554_6_58	-	st254
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.90648	32.7	-	FFXJ01	61	3051	2890	2/10/16	3/5/17	Contig	SC	SAMEA1464213	GCA_900045685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/685/GCA_900045685.1_7554_6_61	-	st262
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7391	52.1	-	CUYT01	57	4913	4554	4/2/15	2/28/17	Scaffold	SC	SAMEA2156426	GCA_001240085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/085/GCA_001240085.1_10425_1_85	-	ty2-99
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98854	39.8	-	FDYW01	50	2187	1932	2/9/16	3/13/17	Scaffold	SC	SAMEA2238426	GCA_900025815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/815/GCA_900025815.1_11860_5_57	-	2842STDY5643796
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.79331	50.6	-	CYFH01	74	5013	4719	8/24/15	2/24/17	Scaffold	SC	SAMEA1531012	GCA_001285565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/565/GCA_001285565.1_8205_3_74	-	G500407
Escherichia coli	562	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	5.20913	50.6	-	CYFX01	183	5626	5137	8/24/15	2/24/17	Scaffold	SC	SAMEA1528021	GCA_001285605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/605/GCA_001285605.1_8205_8_74	-	G500830
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06004	39.5	-	FEDP01	35	2277	2037	2/9/16	3/15/17	Scaffold	SC	SAMEA2238640	GCA_900025825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/825/GCA_900025825.1_11861_1_78	-	2842STDY5644012
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71637	52.1	-	CUYK01	52	4885	4509	4/2/15	2/28/17	Scaffold	SC	SAMEA2152267	GCA_001240105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/105/GCA_001240105.1_10425_1_94	-	ty1-34
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.94511	32.7	-	FFXL01	60	3086	2914	2/10/16	3/6/17	Contig	SC	SAMEA1464568	GCA_900045695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/695/GCA_900045695.1_7554_6_64	-	st266
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8059	32.7	-	FFXP01	31	2905	2778	2/10/16	3/5/17	Contig	SC	SAMEA1464600	GCA_900045705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/705/GCA_900045705.1_7554_6_67	-	st277
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73599	52	-	CUZO01	62	4894	4531	4/2/15	2/28/17	Scaffold	SC	SAMEA2144003	GCA_001240165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/165/GCA_001240165.1_10425_1_82	-	ty2-111
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00042	39.6	-	FEFI01	22	2185	1974	2/9/16	3/13/17	Scaffold	SC	SAMEA2238725	GCA_900025835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/835/GCA_900025835.1_11861_2_65	-	2842STDY5644098
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.80493	50.4	-	CYCJ01	110	5097	4724	8/22/15	2/24/17	Scaffold	SC	SAMEA1466177	GCA_001285625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/625/GCA_001285625.1_7790_1_84	-	202317_aEPEC
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.09828	50.4	-	CYDO01	84	5361	4989	8/22/15	2/24/17	Scaffold	SC	SAMEA1531047	GCA_001285645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/645/GCA_001285645.1_8205_3_23	-	505148
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07557	39.7	-	FCPU01	35	2289	2023	2/6/16	3/13/17	Scaffold	SC	SAMEA2238741	GCA_900025845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/845/GCA_900025845.1_11861_2_80	-	2842STDY5644114
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81784	52	-	CUYV01	59	5018	4619	4/2/15	2/28/17	Scaffold	SC	SAMEA2153522	GCA_001240245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/245/GCA_001240245.1_10425_1_20	-	dn136
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82933	32.7	-	FFXT01	58	2929	2778	2/10/16	3/5/17	Contig	SC	SAMEA1464266	GCA_900045715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/715/GCA_900045715.1_7554_6_74	-	st302
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.96814	32.6	-	FFXW01	60	3124	2936	2/10/16	3/5/17	Contig	SC	SAMEA1464239	GCA_900045725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/725/GCA_900045725.1_7554_6_77	-	st305
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9324	51.8	-	CUZR01	73	5125	4740	4/2/15	2/28/17	Scaffold	SC	SAMEA2160700	GCA_001240325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/325/GCA_001240325.1_10425_1_30	-	dn19
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01465	39.8	-	FCQW01	22	2254	2007	2/6/16	3/13/17	Scaffold	SC	SAMEA2239056	GCA_900025855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/855/GCA_900025855.1_11860_7_15	-	2842STDY5644436
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.072	50.6	-	CYFL01	150	5438	5035	8/24/15	2/24/17	Scaffold	SC	SAMEA1531029	GCA_001285685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/685/GCA_001285685.1_8205_3_75	-	G504540
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.22657	50.4	-	CYET01	138	5547	5125	8/24/15	2/24/17	Scaffold	SC	SAMEA1530984	GCA_001285705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/705/GCA_001285705.1_8205_3_56	-	402767
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07022	39.5	-	FCRM01	27	2257	2022	2/6/16	3/6/17	Scaffold	SC	SAMEA2239000	GCA_900025865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/865/GCA_900025865.1_11861_4_54	-	2842STDY5644376
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72138	52	-	CUYH01	46	4885	4515	4/2/15	2/28/17	Scaffold	SC	SAMEA2159075	GCA_001240435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/435/GCA_001240435.1_10425_1_4	-	dtc86
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83495	32.7	-	FFYD01	64	2942	2792	2/10/16	3/5/17	Contig	SC	SAMEA1464446	GCA_900045735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/735/GCA_900045735.1_7554_6_86	-	st325
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83737	32.7	-	FFYI01	66	2935	2788	2/10/16	3/6/17	Contig	SC	SAMEA1464459	GCA_900045745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/745/GCA_900045745.1_7554_6_88	-	st330
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9318	51.8	-	CUZU01	66	5138	4740	4/2/15	2/28/17	Scaffold	SC	SAMEA2145317	GCA_001240535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/535/GCA_001240535.1_10425_1_16	-	dn14
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06289	39.6	-	FCVN01	39	2238	2021	2/6/16	3/13/17	Scaffold	SC	SAMEA2238883	GCA_900025885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/885/GCA_900025885.1_11861_3_29	-	2842STDY5644258
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.46024	50.4	-	CYCH01	204	5885	5369	8/22/15	2/24/17	Scaffold	SC	SAMEA1466112	GCA_001285725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/725/GCA_001285725.1_7790_1_71	-	702745_aEPEC
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.8579	50.8	-	CYBP01	188	5215	4800	8/22/15	2/24/17	Scaffold	SC	SAMEA1466099	GCA_001285805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/805/GCA_001285805.1_7790_1_56	-	400998_aEPEC
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09525	39.5	-	FCXH01	43	2314	2074	2/6/16	3/12/17	Scaffold	SC	SAMEA2238950	GCA_900025895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/895/GCA_900025895.1_11861_4_1	-	2842STDY5644326
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81747	51.9	-	CUZE01	59	4998	4633	4/2/15	2/28/17	Scaffold	SC	SAMEA2155582	GCA_001240665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/665/GCA_001240665.1_10425_1_15	-	dn191
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80093	32.7	-	FFYJ01	49	2894	2748	2/10/16	3/5/17	Contig	SC	SAMEA1317502	GCA_900045755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/755/GCA_900045755.1_7414_7_49	-	st349
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.71154	32.7	-	FFYN01	47	2785	2608	2/10/16	3/5/17	Contig	SC	SAMEA1317327	GCA_900045765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/765/GCA_900045765.1_7414_7_54	-	st376
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.725	52.1	-	CUYO01	56	4895	4540	4/2/15	2/28/17	Scaffold	SC	SAMEA2152014	GCA_001240755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/755/GCA_001240755.1_10425_1_75	-	ty1-16
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00443	39.8	-	FCXG01	22	2238	1998	2/6/16	3/13/17	Scaffold	SC	SAMEA2238949	GCA_900025905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/905/GCA_900025905.1_11861_3_96	-	2842STDY5644325
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.08173	50.5	-	CYFR01	213	5416	4940	8/24/15	2/24/17	Scaffold	SC	SAMEA1531040	GCA_001285905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/905/GCA_001285905.1_8205_3_79	-	G302544
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.89326	50.8	-	CYFT01	208	5232	4824	8/24/15	2/24/17	Scaffold	SC	SAMEA1531061	GCA_001285945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/945/GCA_001285945.1_8205_3_9	-	402617
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01411	39.8	-	FCYG01	26	2234	1997	2/6/16	3/13/17	Scaffold	SC	SAMEA2238977	GCA_900025915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/915/GCA_900025915.1_11861_4_29	-	2842STDY5644353
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7768	52	-	CUYS01	56	4947	4588	4/2/15	2/28/17	Scaffold	SC	SAMEA2146033	GCA_001240985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/240/985/GCA_001240985.1_10425_1_54	-	ty3-214
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.89908	32.7	-	FFZC01	68	3002	2851	2/10/16	3/5/17	Contig	SC	SAMEA1317508	GCA_900045775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/775/GCA_900045775.1_7414_7_74	-	st430
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.94463	32.7	-	FFZE01	61	3097	2909	2/10/16	3/5/17	Contig	SC	SAMEA1317367	GCA_900045795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/795/GCA_900045795.1_7414_7_79	-	st453
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81686	51.9	-	CUYX01	55	5004	4631	4/2/15	2/28/17	Scaffold	SC	SAMEA2145505	GCA_001241045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/045/GCA_001241045.1_10425_1_19	-	dn121
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02644	39.7	-	FCYR01	51	2220	1971	2/6/16	3/13/17	Scaffold	SC	SAMEA2674573	GCA_900025925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/925/GCA_900025925.1_14355_8_46	-	2842STDY5881833
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.19219	50.5	-	CYDF01	194	5606	5126	8/22/15	2/24/17	Scaffold	SC	SAMEA1531064	GCA_001285965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/965/GCA_001285965.1_8205_3_10	-	402635
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.24043	50.6	-	CYBD01	205	5661	5245	8/22/15	2/24/17	Scaffold	SC	SAMEA1466185	GCA_001285985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/985/GCA_001285985.1_7748_7_5	-	102328_aEPEC
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.14637	39.5	-	FCZJ01	46	2354	2090	2/6/16	3/13/17	Scaffold	SC	SAMEA2674649	GCA_900025935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/935/GCA_900025935.1_14412_3_27	-	2842STDY5881909
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93266	51.8	-	CUZQ01	69	5128	4743	4/2/15	2/28/17	Scaffold	SC	SAMEA2152074	GCA_001241145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/145/GCA_001241145.1_10425_1_37	-	dn61
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83151	32.7	-	FFZN01	63	2948	2785	2/10/16	3/5/17	Contig	SC	SAMEA1317560	GCA_900045805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/805/GCA_900045805.1_7414_7_91	-	st490
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.94815	32.7	-	FFZY01	58	3123	2929	2/10/16	3/5/17	Contig	SC	SAMEA1317471	GCA_900045815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/815/GCA_900045815.1_7414_8_7	-	st515
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93086	51.8	-	CUZI01	69	5125	4747	4/2/15	2/28/17	Scaffold	SC	SAMEA1972818	GCA_001241235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/235/GCA_001241235.1_10425_1_27	-	dn18
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11607	39.5	-	FCZL01	48	2338	2084	2/6/16	3/13/17	Scaffold	SC	SAMEA2674655	GCA_900025945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/945/GCA_900025945.1_14412_3_33	-	2842STDY5881915
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.10157	50.6	-	CYCD01	225	5487	5082	8/22/15	2/24/17	Scaffold	SC	SAMEA1466165	GCA_001286045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/045/GCA_001286045.1_7790_1_68	-	503238_aEPEC
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.96519	49.7	-	CYCK01	164	5196	4743	8/22/15	2/24/17	Scaffold	SC	SAMEA1466109	GCA_001286085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/085/GCA_001286085.1_7790_1_78	-	102606_aEPEC
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05748	39.6	-	FCZR01	29	2284	2012	2/6/16	3/13/17	Scaffold	SC	SAMEA2674688	GCA_900025955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/955/GCA_900025955.1_14412_3_56	-	2842STDY5881939
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7761	52	-	CUYP01	55	4956	4595	4/2/15	2/28/17	Scaffold	SC	SAMEA2161985	GCA_001241345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/345/GCA_001241345.1_10425_1_72	-	ty2-93
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83132	32.7	-	FFQD01	24	2947	2774	2/9/16	3/5/17	Contig	SC	SAMEA1568643	GCA_900045935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/935/GCA_900045935.1_8490_3_3	-	st838
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81276	32.7	-	FFYF01	46	2906	2763	2/10/16	3/5/17	Contig	SC	SAMEA1464314	GCA_900045945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/945/GCA_900045945.1_7554_6_94	-	st341
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73925	52.1	-	CUYI01	44	4910	4556	4/2/15	2/28/17	Scaffold	SC	SAMEA2157962	GCA_001241445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/445/GCA_001241445.1_10425_1_40	-	ct1-7
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04171	39.6	-	FCZS01	20	2232	2007	2/6/16	3/13/17	Scaffold	SC	SAMEA2674694	GCA_900025965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/965/GCA_900025965.1_14412_3_59	-	2842STDY5881942
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.11605	50.6	-	CYFB01	163	5458	5095	8/24/15	2/24/17	Scaffold	SC	SAMEA1531020	GCA_001286105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/105/GCA_001286105.1_8205_3_6	-	202474
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.78366	50.7	-	CYFG01	82	4978	4693	8/24/15	2/24/17	Scaffold	SC	SAMEA1530996	GCA_001286125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/125/GCA_001286125.1_8205_3_71	-	302710
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99987	39.6	-	FDAL01	27	2199	1974	2/6/16	3/13/17	Scaffold	SC	SAMEA2382621	GCA_900025975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/975/GCA_900025975.1_12673_6_76	-	2842STDY5753161
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73056	52.1	-	CUZH01	59	4906	4530	4/2/15	2/28/17	Scaffold	SC	SAMEA2158643	GCA_001241545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/545/GCA_001241545.1_10425_1_68	-	ty2-107
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79925	32.7	-	FFZJ01	47	2888	2744	2/10/16	3/5/17	Contig	SC	SAMEA1317495	GCA_900045955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/955/GCA_900045955.1_7414_7_87	-	st475
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83116	32.7	-	FFZM01	62	2932	2778	2/10/16	3/6/17	Contig	SC	SAMEA1317489	GCA_900045965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/965/GCA_900045965.1_7414_7_88	-	st478
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.92573	51.8	-	CUZV01	65	5119	4735	4/2/15	2/28/17	Scaffold	SC	SAMEA2154457	GCA_001241615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/615/GCA_001241615.1_10425_1_29	-	dtc103
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13047	39.6	-	FDAM01	36	2380	2123	2/6/16	3/5/17	Scaffold	SC	SAMEA2382623	GCA_900025985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/985/GCA_900025985.1_12673_6_78	-	2842STDY5753163
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.26751	50.7	-	CYAW01	281	5753	5231	8/22/15	2/24/17	Scaffold	SC	SAMEA1466110	GCA_001286145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/145/GCA_001286145.1_7553_7_62	-	503947_aEPEC
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.17459	50.6	-	CYBE01	304	5625	5133	8/22/15	2/24/17	Scaffold	SC	SAMEA1466117	GCA_001286205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/205/GCA_001286205.1_7748_7_48	-	703975_aEPEC
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10637	39.7	-	FDAO01	63	2339	2075	2/6/16	3/13/17	Scaffold	SC	SAMEA2382625	GCA_900025995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/995/GCA_900025995.1_12673_6_80	-	2842STDY5753165
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73885	52.1	-	CUZL01	58	4911	4553	4/2/15	2/28/17	Scaffold	SC	SAMEA2149815	GCA_001241705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/705/GCA_001241705.1_10425_1_81	-	ty2-98
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86704	32.7	-	FGCJ01	41	3013	2819	2/10/16	3/5/17	Contig	SC	SAMEA1464195	GCA_900045975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/975/GCA_900045975.1_7748_6_10	-	st772
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86163	32.7	-	FGCN01	38	2989	2861	2/10/16	3/5/17	Contig	SC	SAMEA1464217	GCA_900045985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/985/GCA_900045985.1_7712_8_54	-	st776
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7161	52.1	-	CUYQ01	60	4877	4514	4/2/15	2/28/17	Scaffold	SC	SAMEA2162124	GCA_001241805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/241/805/GCA_001241805.1_10425_1_46	-	ipt57
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.16369	39.6	-	FDAQ01	41	2403	2142	2/6/16	3/13/17	Scaffold	SC	SAMEA2382627	GCA_900026005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/005/GCA_900026005.1_12673_6_82	-	2842STDY5753167
Escherichia coli	562	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	5.03095	50.6	-	CYFS01	83	5336	5003	8/24/15	2/24/17	Scaffold	SC	SAMEA1528005	GCA_001286245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/245/GCA_001286245.1_8205_8_71	-	G400792
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.92047	50.8	-	CYCT01	338	5374	4901	8/22/15	2/24/17	Scaffold	SC	SAMEA1466141	GCA_001286285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/285/GCA_001286285.1_7790_1_69	-	503891_aEPEC
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08224	39.6	-	FDAS01	38	2316	2055	2/6/16	3/13/17	Scaffold	SC	SAMEA2382629	GCA_900026015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/015/GCA_900026015.1_12673_6_84	-	2842STDY5753169
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73961	52.1	-	CUYR01	54	4916	4558	4/2/15	2/28/17	Scaffold	SC	SAMEA2143088	GCA_001242025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/025/GCA_001242025.1_10425_1_67	-	ty2-91
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.705	32.7	-	FGLO01	22	2806	2655	2/10/16	3/5/17	Contig	SC	SAMEA1464594	GCA_900045995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/995/GCA_900045995.1_7748_6_17	-	st1424
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87257	32.7	-	FGMH01	58	3015	2827	2/10/16	3/5/17	Contig	SC	SAMEA1464710	GCA_900046005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/005/GCA_900046005.1_7521_6_1	-	st1472
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93194	51.8	-	CUYZ01	68	5115	4734	4/2/15	2/28/17	Scaffold	SC	SAMEA2163035	GCA_001242105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/105/GCA_001242105.1_10425_1_62	-	ty2-120
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1293	39.6	-	FDAT01	52	2377	2118	2/6/16	3/13/17	Scaffold	SC	SAMEA2382630	GCA_900026025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/025/GCA_900026025.1_12673_6_85	-	2842STDY5753170
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.12018	50.5	-	CYFU01	205	5497	5060	8/24/15	2/24/17	Scaffold	SC	SAMEA1531050	GCA_001286305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/305/GCA_001286305.1_8205_3_81	-	G603423
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.08948	50.6	-	CYEX01	151	5461	5097	8/24/15	2/24/17	Scaffold	SC	SAMEA1530993	GCA_001286325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/325/GCA_001286325.1_8205_3_58	-	402842
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.03122	39.7	-	FDBO01	40	2224	1991	2/6/16	3/12/17	Scaffold	SC	SAMEA2382651	GCA_900026035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/035/GCA_900026035.1_12673_7_11	-	2842STDY5753192
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73994	52.1	-	CUZM01	55	4919	4557	4/2/15	2/28/17	Scaffold	SC	SAMEA2143949	GCA_001242225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/225/GCA_001242225.1_10425_1_96	-	ty2-75
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81954	32.7	-	FGMS01	48	2943	2763	2/10/16	3/5/17	Contig	SC	SAMEA1464477	GCA_900046015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/015/GCA_900046015.1_7521_6_16	-	st1511
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78443	32.7	-	FGMR01	24	2921	2744	2/10/16	3/5/17	Contig	SC	SAMEA1464492	GCA_900046025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/025/GCA_900046025.1_7748_6_23	-	st1520
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72035	52	-	CUZK01	60	4888	4518	4/2/15	2/28/17	Scaffold	SC	SAMEA1967461	GCA_001242295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/295/GCA_001242295.1_10425_1_34	-	dtc93
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15567	39.5	-	FDBR01	60	2356	2093	2/6/16	3/13/17	Scaffold	SC	SAMEA2382653	GCA_900026045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/045/GCA_900026045.1_12673_7_13	-	2842STDY5753194
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.21691	50.7	-	CYAY01	278	5653	5187	8/22/15	2/24/17	Scaffold	SC	SAMEA1466152	GCA_001286405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/405/GCA_001286405.1_7748_7_17	-	300086_aEPEC
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.95076	50.6	-	CXZL01	119	5274	4812	8/22/15	2/24/17	Scaffold	SC	SAMEA1466197	GCA_001286425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/425/GCA_001286425.1_7553_7_68	-	203470_aEPEC
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05521	39.5	-	FDCB01	32	2265	2035	2/6/16	3/13/17	Scaffold	SC	SAMEA2382664	GCA_900026055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/055/GCA_900026055.1_12673_7_24	-	2842STDY5753205
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71901	52	-	CUZC01	53	4878	4524	4/2/15	2/28/17	Scaffold	SC	SAMEA2148604	GCA_001242365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/365/GCA_001242365.1_10425_1_60	-	ty1-35
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77361	32.7	-	FGOP01	26	2887	2731	2/10/16	3/5/17	Contig	SC	SAMEA1464549	GCA_900046035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/035/GCA_900046035.1_7554_6_76	-	st304
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82051	32.7	-	FGOU01	98	2907	2759	2/10/16	3/6/17	Contig	SC	SAMEA1464231	GCA_900046045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/045/GCA_900046045.1_7554_6_93	-	st340
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.80895	51.9	-	CUYJ01	60	4990	4610	4/2/15	2/28/17	Scaffold	SC	SAMEA2160829	GCA_001242455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/455/GCA_001242455.1_10425_1_31	-	dn160
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10924	39.6	-	FDCC01	48	2354	2095	2/6/16	3/5/17	Scaffold	SC	SAMEA2382665	GCA_900026065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/065/GCA_900026065.1_12673_7_25	-	2842STDY5753206
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.2313	50.7	-	CYFK01	281	5675	5196	8/24/15	2/24/17	Scaffold	SC	SAMEA1531063	GCA_001286445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/445/GCA_001286445.1_8205_3_60	-	500094
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.78341	50.5	-	CYGI01	44	4911	4613	8/25/15	2/24/17	Scaffold	SC	SAMEA1531059	GCA_001286485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/485/GCA_001286485.1_8205_3_40	-	703108
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07851	39.6	-	FDCF01	34	2303	2051	2/6/16	3/13/17	Scaffold	SC	SAMEA2382668	GCA_900026075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/075/GCA_900026075.1_12673_7_28	-	2842STDY5753209
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81826	51.9	-	CUYU01	55	5005	4626	4/2/15	2/28/17	Scaffold	SC	SAMEA2163445	GCA_001242595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/595/GCA_001242595.1_10425_1_11	-	dtc174
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86481	32.7	-	FGOT01	49	2998	2821	2/10/16	3/5/17	Contig	SC	SAMEA1317389	GCA_900046055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/055/GCA_900046055.1_7414_7_53	-	st372
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79512	32.7	-	FGQH01	58	2895	2740	2/10/16	3/5/17	Contig	SC	SAMEA1469624	GCA_900046065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/065/GCA_900046065.1_7480_7_25	-	st1171
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.85088	52	-	CXZB01	48	5066	4676	8/20/15	2/28/17	Scaffold	SC	SAMEA1930226	GCA_001283125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/125/GCA_001283125.1_10593_2_80	-	Aug-02
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.03224	39.6	-	FDCL01	47	2233	1993	2/6/16	3/5/17	Scaffold	SC	SAMEA2382674	GCA_900026085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/085/GCA_900026085.1_12673_7_34	-	2842STDY5753215
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.16941	50.4	-	CYGN01	270	5538	5030	8/25/15	2/24/17	Scaffold	SC	SAMEA1531038	GCA_001286505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/505/GCA_001286505.1_8205_3_64	-	302619
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.20869	50.6	-	CYGM01	200	5639	5189	8/25/15	2/24/17	Scaffold	SC	SAMEA1531057	GCA_001286545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/545/GCA_001286545.1_8205_3_80	-	G401529
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11281	39.6	-	FDCN01	50	2325	2060	2/6/16	3/5/17	Scaffold	SC	SAMEA2382676	GCA_900026095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/095/GCA_900026095.1_12673_7_36	-	2842STDY5753217
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB1252	205706	Proteobacteria	Gammaproteobacteria	4.93506	51.8	-	CVKD01	56	5128	4749	4/2/15	2/28/17	Scaffold	SC	SAMEA1903752	GCA_001317585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/585/GCA_001317585.1_9475_4_50	-	C3551
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80496	32.7	-	FGSI01	36	2896	2746	2/10/16	3/5/17	Contig	SC	SAMEA1464391	GCA_900046075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/075/GCA_900046075.1_7521_6_86	-	st1723
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80181	32.7	-	FGSK01	30	2893	2742	2/10/16	3/5/17	Contig	SC	SAMEA1464497	GCA_900046085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/085/GCA_900046085.1_7748_6_25	-	st1729
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB1252	205706	Proteobacteria	Gammaproteobacteria	4.74667	52.1	-	CGSP01	48	4922	4547	4/21/15	2/28/17	Scaffold	SC	SAMEA1903758	GCA_001317625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/625/GCA_001317625.1_9475_4_52	-	C3495
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99134	39.8	-	FDCS01	45	2199	1941	2/6/16	3/12/17	Scaffold	SC	SAMEA2382681	GCA_900026105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/105/GCA_900026105.1_12673_7_41	-	2842STDY5753222
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.04361	50.6	-	CYGO01	122	5336	4986	8/25/15	2/24/17	Scaffold	SC	SAMEA1531017	GCA_001286585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/585/GCA_001286585.1_8205_3_68	-	700863
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.46729	50.3	-	CYGQ01	223	5878	5373	8/25/15	2/24/17	Scaffold	SC	SAMEA1531009	GCA_001286625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/625/GCA_001286625.1_8205_3_29	-	100446
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01402	39.7	-	FDCT01	19	2246	2009	2/6/16	3/13/17	Scaffold	SC	SAMEA2382682	GCA_900026115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/115/GCA_900026115.1_12673_7_42	-	2842STDY5753223
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB1252	205706	Proteobacteria	Gammaproteobacteria	4.74059	52.1	-	CGSJ01	40	4907	4553	4/21/15	2/28/17	Scaffold	SC	SAMEA1903764	GCA_001317665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/665/GCA_001317665.1_9475_4_57	-	E1303
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79613	32.7	-	FGSM01	63	2878	2726	2/10/16	3/5/17	Contig	SC	SAMEA1464617	GCA_900046095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/095/GCA_900046095.1_7521_6_90	-	st1735
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80308	32.7	-	FGSP01	40	2889	2747	2/10/16	3/5/17	Contig	SC	SAMEA1317324	GCA_900046105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/105/GCA_900046105.1_7469_7_2	-	st1745
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB1398	268727	Proteobacteria	Gammaproteobacteria	4.73365	52.1	-	CGSQ01	42	4912	4556	4/21/15	2/28/17	Scaffold	SC	SAMEA1904372	GCA_001317685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/317/685/GCA_001317685.1_9472_4_78	-	OVG_041
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09454	39.6	-	FDCW01	41	2291	2053	2/6/16	3/13/17	Scaffold	SC	SAMEA2382685	GCA_900026125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/125/GCA_900026125.1_12673_7_45	-	2842STDY5753226
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.21534	50.5	-	CYGP01	167	5626	5205	8/25/15	2/24/17	Scaffold	SC	SAMEA1531027	GCA_001286645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/645/GCA_001286645.1_8205_3_66	-	500193
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.88206	50.6	-	CYGR01	79	5213	4808	8/25/15	2/24/17	Scaffold	SC	SAMEA1466147	GCA_001286665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/665/GCA_001286665.1_7553_7_65	-	401480_aEPEC
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.24511	39.5	-	FDDR01	65	2522	2267	2/6/16	3/13/17	Scaffold	SC	SAMEA2382706	GCA_900026135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/135/GCA_900026135.1_12673_7_66	-	2842STDY5753247
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97296	52.1	-	CVMK01	84	5163	4879	4/15/15	2/28/17	Scaffold	SC	SAMEA1522032	GCA_001326135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/135/GCA_001326135.1_8080_3_62	-	V82
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81165	32.7	-	FGSR01	66	2909	2763	2/10/16	3/5/17	Contig	SC	SAMEA1317342	GCA_900046115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/115/GCA_900046115.1_7469_7_1	-	st1742
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81487	32.7	-	FGSQ01	74	2909	2766	2/10/16	3/5/17	Contig	SC	SAMEA1317532	GCA_900046125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/125/GCA_900046125.1_7469_7_5	-	st1775
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	5.04022	52.2	-	CVKM01	85	5244	4961	4/2/15	2/28/17	Scaffold	SC	SAMEA1707599	GCA_001326155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/155/GCA_001326155.1_9066_1_10	-	EWV10
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15514	39.6	-	FDDX01	69	2389	2120	2/6/16	3/13/17	Scaffold	SC	SAMEA2382712	GCA_900026145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/145/GCA_900026145.1_12673_7_72	-	2842STDY5753253
Escherichia coli	562	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	5.01326	50.4	-	CYGU01	131	5264	4925	8/25/15	2/25/17	Scaffold	SC	SAMEA1527972	GCA_001286685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/685/GCA_001286685.1_8205_8_79	-	G500297-1
Escherichia coli	562	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	5.18373	50.2	-	CYGT01	282	5433	5030	8/25/15	2/24/17	Scaffold	SC	SAMEA1527953	GCA_001286705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/705/GCA_001286705.1_8205_8_76	-	G303212
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08232	39.5	-	FDDZ01	43	2276	2010	2/6/16	3/13/17	Scaffold	SC	SAMEA2382714	GCA_900026155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/155/GCA_900026155.1_12673_7_74	-	2842STDY5753255
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.98038	52.1	-	CVKJ01	87	5160	4872	4/2/15	2/28/17	Scaffold	SC	SAMEA1707600	GCA_001326175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/175/GCA_001326175.1_9066_1_9	-	EWH10
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82932	32.7	-	FGSX01	45	2925	2782	2/10/16	3/5/17	Contig	SC	SAMEA1317459	GCA_900046135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/135/GCA_900046135.1_7469_7_11	-	st1793
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77588	32.7	-	FGSU01	31	2852	2733	2/10/16	3/6/17	Contig	SC	SAMEA1317469	GCA_900046145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/145/GCA_900046145.1_7469_7_10	-	st1792
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	5.00161	52.1	-	CVKH01	79	5197	4896	4/2/15	2/28/17	Scaffold	SC	SAMEA1707607	GCA_001326195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/195/GCA_001326195.1_9066_1_8	-	EWH3
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11582	39.5	-	FDEM01	54	2337	2090	2/6/16	3/12/17	Scaffold	SC	SAMEA2382728	GCA_900026165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/165/GCA_900026165.1_12673_7_88	-	2842STDY5753269
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.40331	50.3	-	LFUH01	497	5966	5421	9/23/15	2/24/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN03780448	GCA_001297965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/965/GCA_001297965.1_ASM129796v1	26311863	STEC 915
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.30593	50.3	-	LDOZ01	165	5724	5274	9/23/15	2/24/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN03736827	GCA_001297975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/975/GCA_001297975.1_ASM129797v1	26311863	STEC 343
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02788	39.7	-	FDFB01	30	2214	1984	2/6/16	3/12/17	Scaffold	SC	SAMEA2382743	GCA_900026175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/175/GCA_900026175.1_12718_4_8	-	2842STDY5753285
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	5.00775	52.1	-	CVKA01	63	5214	4910	4/2/15	2/28/17	Scaffold	SC	SAMEA1707616	GCA_001326215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/215/GCA_001326215.1_9065_1_5	-	EWH4
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78175	32.7	-	FGSV01	60	2860	2710	2/10/16	3/5/17	Contig	SC	SAMEA1317518	GCA_900046155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/155/GCA_900046155.1_7469_7_13	-	st1798
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83197	32.7	-	FGSW01	73	2933	2776	2/10/16	3/5/17	Contig	SC	SAMEA1317494	GCA_900046165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/165/GCA_900046165.1_7469_7_14	-	st1799
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.98629	52.1	-	CVKK01	80	5190	4883	4/2/15	2/28/17	Scaffold	SC	SAMEA1707617	GCA_001326235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/235/GCA_001326235.1_9066_1_2	-	EWH11
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11547	39.6	-	FDFF01	35	2372	2102	2/6/16	3/13/17	Scaffold	SC	SAMEA2382747	GCA_900026185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/185/GCA_900026185.1_12718_4_12	-	2842STDY5753289
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.36239	50.3	-	LFUB01	180	5756	5329	9/23/15	2/24/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN03779023	GCA_001297985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/985/GCA_001297985.1_ASM129798v1	26311863	STEC 623
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.30945	50.3	-	LFUA01	221	5736	5282	9/23/15	2/24/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN03779010	GCA_001297995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/995/GCA_001297995.1_ASM129799v1	26311863	STEC 605
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13137	39.6	-	FDFC01	49	2383	2125	2/6/16	3/13/17	Scaffold	SC	SAMEA2382744	GCA_900026195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/195/GCA_900026195.1_12718_4_9	-	2842STDY5753286
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95671	52.1	-	CVKN01	90	5128	4852	4/2/15	2/28/17	Scaffold	SC	SAMEA773517	GCA_001326255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/326/255/GCA_001326255.1_5388_1_10	-	H34
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78286	32.7	-	FGSY01	47	2868	2722	2/10/16	3/5/17	Contig	SC	SAMEA1317529	GCA_900046175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/175/GCA_900046175.1_7469_7_16	-	st1803
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79456	32.7	-	FGTC01	47	2899	2742	2/10/16	3/5/17	Contig	SC	SAMEA1317435	GCA_900046185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/185/GCA_900046185.1_7469_7_21	-	st1820
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.78896	52	-	CGRJ01	52	4952	4580	4/21/15	2/28/17	Scaffold	SC	SAMEA1406327	GCA_001328595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/595/GCA_001328595.1_7468_7_65	-	IB5352
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.9917	39.7	-	FDFT01	26	2177	1972	2/6/16	3/13/17	Scaffold	SC	SAMEA2382761	GCA_900026205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/205/GCA_900026205.1_12718_4_26	-	2842STDY5753303
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.73647	50.9	-	JRRU01	165	4911	4541	10/26/15	2/24/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872752	GCA_001413535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/535/GCA_001413535.1_ASM141353v1	25501822	RU1 MA12
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.72601	50.9	-	JRRX01	236	4877	4542	10/26/15	2/24/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872755	GCA_001413555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/555/GCA_001413555.1_ASM141355v1	25501822	RU1 LB3
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11651	39.5	-	FDFW01	52	2325	2083	2/6/16	3/13/17	Scaffold	SC	SAMEA2382764	GCA_900026215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/215/GCA_900026215.1_12718_4_29	-	2842STDY5753306
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.74661	52.1	-	CGQN01	55	4913	4555	4/21/15	2/28/17	Scaffold	SC	SAMEA1406331	GCA_001328635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/635/GCA_001328635.1_7468_7_57	-	IB5343
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77204	32.7	-	FGTJ01	10	2880	2729	2/10/16	3/6/17	Contig	SC	SAMEA1317392	GCA_900046215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/215/GCA_900046215.1_7469_7_32	-	st1881
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80119	32.7	-	FGTP01	46	2894	2746	2/10/16	3/5/17	Contig	SC	SAMEA1317592	GCA_900046225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/225/GCA_900046225.1_7469_7_41	-	st1921
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.74594	52.1	-	CGUX01	51	4916	4550	4/21/15	2/28/17	Scaffold	SC	SAMEA1406340	GCA_001328695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/695/GCA_001328695.1_7468_7_60	-	IB5347
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.03506	39.6	-	FDFY01	25	2239	2029	2/6/16	3/13/17	Scaffold	SC	SAMEA2382766	GCA_900026225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/225/GCA_900026225.1_12718_4_31	-	2842STDY5753308
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.70923	50.9	-	JRSF01	401	4876	4568	10/26/15	2/24/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872763	GCA_001413675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/675/GCA_001413675.1_ASM141367v1	25501822	RU1 LB11
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.72249	50.9	-	JRSK01	277	4858	4547	10/26/15	2/24/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872780	GCA_001413755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/755/GCA_001413755.1_ASM141375v1	25501822	RU1 BHI4
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99224	39.8	-	FDHN01	41	2199	1935	2/6/16	3/13/17	Scaffold	SC	SAMEA2382807	GCA_900026235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/235/GCA_900026235.1_12718_4_72	-	2842STDY5753349
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.85979	51.9	-	CGRF01	103	5043	4669	4/21/15	2/28/17	Scaffold	SC	SAMEA1406350	GCA_001328735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/735/GCA_001328735.1_7468_7_79	-	IB5368
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77965	32.7	-	FGTV01	52	2878	2730	2/10/16	3/5/17	Contig	SC	SAMEA1317409	GCA_900046235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/235/GCA_900046235.1_7469_7_50	-	st1941
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85234	32.7	-	FGTX01	76	2972	2814	2/10/16	3/5/17	Contig	SC	SAMEA1317394	GCA_900046245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/245/GCA_900046245.1_7469_7_51	-	st1942
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.72169	52	-	CGUW01	52	4868	4514	4/21/15	2/28/17	Scaffold	SC	SAMEA1406351	GCA_001328755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/755/GCA_001328755.1_7468_7_92	-	IB5382
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.006	39.7	-	FDHO01	32	2221	1982	2/6/16	3/13/17	Scaffold	SC	SAMEA2382808	GCA_900026245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/245/GCA_900026245.1_12718_4_73	-	2842STDY5753350
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	4.69005	50.9	-	JRSQ01	360	4826	4540	10/26/15	2/24/17	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872786	GCA_001413815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/815/GCA_001413815.1_ASM141381v1	25501822	RU1 BHI10
Escherichia coli	562	PRJNA296464	296464	Proteobacteria	Gammaproteobacteria	5.06568	50.7	-	LKJM01	166	5346	4884	11/19/15	2/25/17	Scaffold	Texas Tech University	SAMN04099627	GCA_001446455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/446/455/GCA_001446455.1_ASM144645v1	26824353	TTU2014-148AME
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99629	39.8	-	FDHY01	45	2193	1930	2/6/16	3/12/17	Scaffold	SC	SAMEA2382818	GCA_900026255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/255/GCA_900026255.1_12718_4_83	-	2842STDY5753360
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.67915	52.1	-	CGRN01	46	4825	4478	4/21/15	2/28/17	Scaffold	SC	SAMEA1406356	GCA_001328775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/775/GCA_001328775.1_7468_7_50	-	IB5336
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77739	32.7	-	FGTW01	64	2865	2724	2/10/16	3/5/17	Contig	SC	SAMEA1317349	GCA_900046255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/255/GCA_900046255.1_7469_7_53	-	st1956
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79942	32.7	-	FGTY01	54	2889	2747	2/10/16	3/5/17	Contig	SC	SAMEA1317329	GCA_900046265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/265/GCA_900046265.1_7469_7_54	-	st1961
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.739	52.1	-	CGQK01	77	4895	4493	4/21/15	2/28/17	Scaffold	SC	SAMEA1406358	GCA_001328795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/795/GCA_001328795.1_7468_7_54	-	IB5340
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.03378	39.7	-	FDHX01	40	2227	2016	2/6/16	3/6/17	Scaffold	SC	SAMEA2382817	GCA_900026265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/265/GCA_900026265.1_12718_4_82	-	2842STDY5753359
Escherichia coli	562	PRJNA298688	298688	Proteobacteria	Gammaproteobacteria	5.72318	50.4	-	LMBJ01	551	6315	5752	12/1/15	2/25/17	Scaffold	Anses	SAMN04161564	GCA_001455025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/455/025/GCA_001455025.1_EC222071v1.0	26868385	22207
Escherichia coli	562	PRJNA298278	298278	Proteobacteria	Gammaproteobacteria	4.98468	50.7	-	LLJU01	204	5207	4841	1/8/16	2/25/17	Scaffold	"Sir Run Run Shaw Hospital,"	SAMN04157978	GCA_001509655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/655/GCA_001509655.1_ASM150965v1	-	E2
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08854	39.6	-	FDII01	25	2316	2077	2/6/16	3/13/17	Scaffold	SC	SAMEA2382830	GCA_900026275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/275/GCA_900026275.1_12718_4_95	-	2842STDY5753372
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.78859	52.1	-	CGRE01	56	4962	4585	4/21/15	2/28/17	Scaffold	SC	SAMEA1406365	GCA_001328835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/835/GCA_001328835.1_7468_7_95	-	IB5385
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79091	32.7	-	FGUC01	57	2892	2743	2/10/16	3/6/17	Contig	SC	SAMEA1317522	GCA_900046275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/275/GCA_900046275.1_7469_7_59	-	st1989
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.91346	32.7	-	FGUB01	50	3082	2891	2/10/16	3/5/17	Contig	SC	SAMEA1317506	GCA_900046285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/285/GCA_900046285.1_7469_7_60	-	st1991
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2226	203992	Proteobacteria	Gammaproteobacteria	4.73721	52.1	-	CGQY01	57	4907	4544	4/21/15	2/28/17	Scaffold	SC	SAMEA1406368	GCA_001328875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/328/875/GCA_001328875.1_7468_7_53	-	IB5339
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01924	39.7	-	FDIY01	22	2226	2014	2/6/16	3/13/17	Scaffold	SC	SAMEA2382847	GCA_900026285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/285/GCA_900026285.1_12718_5_17	-	2842STDY5753390
Escherichia coli	562	PRJNA298278	298278	Proteobacteria	Gammaproteobacteria	4.98569	50.7	-	LLJX01	210	5200	4845	1/8/16	2/25/17	Scaffold	"Sir Run Run Shaw Hospital,"	SAMN04157980	GCA_001509665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/665/GCA_001509665.1_ASM150966v1	-	E4
Escherichia coli	562	PRJNA298278	298278	Proteobacteria	Gammaproteobacteria	4.9828	50.7	-	LLJV01	183	5214	4847	1/8/16	2/25/17	Scaffold	"Sir Run Run Shaw Hospital,"	SAMN04157977	GCA_001509675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/675/GCA_001509675.1_ASM150967v1	-	E1
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98098	39.7	-	FDJT01	15	2199	1966	2/6/16	3/13/17	Scaffold	SC	SAMEA2382871	GCA_900026295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/295/GCA_900026295.1_12718_5_41	-	2842STDY5753414
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.9465	52.1	-	CGGH01	56	5121	4851	3/15/15	2/28/17	Scaffold	SC	SAMEA1568461	GCA_001350035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/035/GCA_001350035.1_8490_2_58	-	CH15
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.9089	32.7	-	FGUD01	55	3065	2888	2/10/16	3/5/17	Contig	SC	SAMEA1317480	GCA_900046295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/295/GCA_900046295.1_7469_7_62	-	st1998
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81162	32.7	-	FGUK01	36	2956	2757	2/10/16	3/5/17	Contig	SC	SAMEA1464701	GCA_900046305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/305/GCA_900046305.1_7748_6_29	-	st2053
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.97492	52.1	-	CGCS01	47	5150	4881	3/15/15	2/28/17	Scaffold	SC	SAMEA1568506	GCA_001350075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/075/GCA_001350075.1_8490_2_55	-	CH12
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05856	39.6	-	FDJU01	33	2256	2018	2/6/16	3/13/17	Scaffold	SC	SAMEA2382873	GCA_900026305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/305/GCA_900026305.1_12718_5_43	-	2842STDY5753416
Escherichia coli	562	PRJNA298278	298278	Proteobacteria	Gammaproteobacteria	4.98215	50.7	-	LLJW01	216	5198	4840	1/8/16	2/25/17	Scaffold	"Sir Run Run Shaw Hospital,"	SAMN04157979	GCA_001509715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/715/GCA_001509715.1_ASM150971v1	-	E3
Escherichia coli	562	PRJNA298278	298278	Proteobacteria	Gammaproteobacteria	4.98945	50.7	-	LLJY01	197	5213	4848	1/8/16	2/25/17	Scaffold	"Sir Run Run Shaw Hospital,"	SAMN04157981	GCA_001509735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/735/GCA_001509735.1_ASM150973v1	-	E5
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02469	39.7	-	FDKA01	29	2216	2011	2/6/16	3/6/17	Scaffold	SC	SAMEA2382879	GCA_900026315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/315/GCA_900026315.1_12718_5_49	-	2842STDY5753422
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.9829	52.1	-	CVKC01	65	5182	4888	4/2/15	2/28/17	Scaffold	SC	SAMEA1568514	GCA_001350095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/095/GCA_001350095.1_8490_2_79	-	CH36
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80409	32.7	-	FGUN01	40	2895	2745	2/10/16	3/5/17	Contig	SC	SAMEA1464290	GCA_900046315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/315/GCA_900046315.1_7564_8_12	-	st2072
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83321	32.8	-	FGUO01	38	2956	2800	2/10/16	3/5/17	Contig	SC	SAMEA1317543	GCA_900046325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/325/GCA_900046325.1_7469_7_74	-	st2073
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.93458	52.1	-	CGCQ01	46	5106	4840	3/15/15	2/28/17	Scaffold	SC	SAMEA1568516	GCA_001350115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/115/GCA_001350115.1_8490_2_45	-	CH2
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.16956	39.6	-	FDKR01	40	2384	2150	2/6/16	3/5/17	Scaffold	SC	SAMEA2382896	GCA_900026325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/325/GCA_900026325.1_12718_5_66	-	2842STDY5753439
Escherichia coli	562	PRJNA298278	298278	Proteobacteria	Gammaproteobacteria	4.98484	50.7	-	LLJZ01	206	5218	4843	1/8/16	2/25/17	Scaffold	"Sir Run Run Shaw Hospital,"	SAMN04157982	GCA_001509745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/509/745/GCA_001509745.1_ASM150974v1	-	E6
Escherichia coli	562	PRJNA309614	309614	Proteobacteria	Gammaproteobacteria	5.37654	50.6	-	LRPA01	169	5713	5370	2/5/16	2/25/17	Scaffold	Lab of Forest Resource protection and Utilization	SAMN04437146	GCA_001550005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/550/005/GCA_001550005.1_ASM155000v1	-	O78
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13715	39.5	-	FDKX01	28	2373	2138	2/6/16	3/13/17	Scaffold	SC	SAMEA2382903	GCA_900026335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/335/GCA_900026335.1_12718_5_73	-	2842STDY5753446
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.97971	52.1	-	CFLD01	50	5153	4876	3/15/15	2/28/17	Scaffold	SC	SAMEA1568517	GCA_001350135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/135/GCA_001350135.1_8490_2_85	-	CH42
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80593	32.8	-	FGUR01	68	2921	2761	2/10/16	3/5/17	Contig	SC	SAMEA1317373	GCA_900046335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/335/GCA_900046335.1_7469_7_76	-	st2078
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78665	32.7	-	FGUS01	54	2859	2711	2/10/16	3/5/17	Contig	SC	SAMEA1317425	GCA_900046345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/345/GCA_900046345.1_7469_7_80	-	st2110
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.96677	52.1	-	CHJY01	52	5149	4871	4/21/15	2/28/17	Scaffold	SC	SAMEA1568524	GCA_001350175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/175/GCA_001350175.1_8490_2_80	-	CH37
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98029	39.7	-	FDLK01	25	2169	1951	2/6/16	3/15/17	Scaffold	SC	SAMEA2382915	GCA_900026345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/345/GCA_900026345.1_12718_5_85	-	2842STDY5753458
Escherichia coli	562	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	4.8207	50.7	-	LORF01	89	4973	4658	2/17/16	2/25/17	Scaffold	Miami University	SAMN03076177	GCA_001562335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/335/GCA_001562335.1_ASM156233v1	-	105433
Escherichia coli	562	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	5.22156	50.8	-	LORD01	99	5535	5190	2/17/16	2/25/17	Scaffold	Miami University	SAMN03076175	GCA_001562345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/345/GCA_001562345.1_ASM156234v1	-	109497
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0012	39.6	-	FDLI01	24	2195	1983	2/6/16	3/5/17	Scaffold	SC	SAMEA2382913	GCA_900026355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/355/GCA_900026355.1_12718_5_83	-	2842STDY5753456
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.92884	52.1	-	CGCH01	37	5098	4825	3/15/15	2/28/17	Scaffold	SC	SAMEA1568529	GCA_001350195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/195/GCA_001350195.1_8490_2_46	-	CH3
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.76226	32.7	-	FGUT01	47	2822	2683	2/10/16	3/5/17	Contig	SC	SAMEA1317436	GCA_900046355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/355/GCA_900046355.1_7469_7_82	-	st2121
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.90334	32.7	-	FGUU01	53	3051	2871	2/10/16	3/6/17	Contig	SC	SAMEA1317414	GCA_900046365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/365/GCA_900046365.1_7469_7_83	-	st2130
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.97672	52.1	-	CFNX01	54	5153	4872	3/15/15	2/28/17	Scaffold	SC	SAMEA1568530	GCA_001350215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/215/GCA_001350215.1_8490_2_66	-	CH23
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13244	39.6	-	FDLN01	35	2369	2129	2/6/16	3/13/17	Scaffold	SC	SAMEA2382918	GCA_900026365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/365/GCA_900026365.1_12718_5_88	-	2842STDY5753461
Escherichia coli	562	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	4.72702	50.8	-	LORE01	98	4938	4590	2/17/16	2/25/17	Scaffold	Miami University	SAMN03076176	GCA_001562375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/375/GCA_001562375.1_ASM156237v1	-	108191
Escherichia coli	562	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	5.22694	50.7	-	LORC01	81	5486	5149	2/17/16	2/25/17	Scaffold	Miami University	SAMN03076178	GCA_001562385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/385/GCA_001562385.1_ASM156238v1	-	105438
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08458	39.7	-	FDLT01	31	2319	2082	2/6/16	3/14/17	Scaffold	SC	SAMEA2382924	GCA_900026375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/375/GCA_900026375.1_12718_5_94	-	2842STDY5753467
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.98034	52.1	-	CIJW01	50	5150	4882	4/21/15	2/28/17	Scaffold	SC	SAMEA1568536	GCA_001350255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/255/GCA_001350255.1_8490_2_72	-	CH29
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.66923	32.7	-	FGUW01	45	2760	2601	2/10/16	3/5/17	Contig	SC	SAMEA1317390	GCA_900046375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/375/GCA_900046375.1_7469_7_85	-	st2137
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79358	32.7	-	FGUX01	48	2885	2743	2/10/16	3/5/17	Contig	SC	SAMEA1317474	GCA_900046385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/385/GCA_900046385.1_7469_7_88	-	st2151
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	4.83913	52.1	-	CVJW01	52	4990	4729	4/2/15	2/28/17	Scaffold	SC	SAMEA1568549	GCA_001350275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/275/GCA_001350275.1_8490_2_82	-	CH39
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12394	39.5	-	FDLW01	37	2347	2101	2/6/16	3/6/17	Scaffold	SC	SAMEA2382927	GCA_900026385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/385/GCA_900026385.1_12754_1_2	-	2842STDY5753471
Escherichia coli	562	PRJNA310650	310650	Proteobacteria	Gammaproteobacteria	5.05168	50.6	-	LRXR01	54	5257	4915	2/24/16	2/25/17	Scaffold	University of Toronto	SAMN04449837	GCA_001571565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/565/GCA_001571565.1_ASM157156v1	26444104	UM141
Escherichia coli	562	PRJNA310650	310650	Proteobacteria	Gammaproteobacteria	5.19742	50.4	-	LRXO01	89	5416	5013	2/24/16	2/25/17	Scaffold	University of Toronto	SAMN04449834	GCA_001571575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/575/GCA_001571575.1_ASM157157v1	-	UM131
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06069	39.6	-	FDMB01	39	2240	1991	2/6/16	3/13/17	Scaffold	SC	SAMEA2382934	GCA_900026395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/395/GCA_900026395.1_12754_1_9	-	2842STDY5753478
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2770	204451	Proteobacteria	Gammaproteobacteria	4.75434	52.1	-	CGSR01	47	4921	4560	4/21/15	2/28/17	Scaffold	SC	SAMEA1687819	GCA_001350295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/295/GCA_001350295.1_8616_4_56	-	SP47
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83336	32.7	-	FGVA01	65	2939	2777	2/10/16	3/6/17	Contig	SC	SAMEA1317536	GCA_900046395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/395/GCA_900046395.1_7469_7_91	-	st2174
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78237	32.7	-	FGVC01	57	2852	2712	2/10/16	3/5/17	Contig	SC	SAMEA1469533	GCA_900046405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/405/GCA_900046405.1_7480_8_1	-	st2187
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2770	204451	Proteobacteria	Gammaproteobacteria	4.76291	52	-	CGSD01	53	4919	4563	4/21/15	2/28/17	Scaffold	SC	SAMEA1687843	GCA_001350355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/355/GCA_001350355.1_8616_4_40	-	BCR52
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09482	39.6	-	FDQU01	37	2291	2055	2/9/16	3/13/17	Scaffold	SC	SAMEA2239113	GCA_900026415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/415/GCA_900026415.1_11860_7_74	-	2842STDY5644494
Escherichia coli	562	PRJNA310650	310650	Proteobacteria	Gammaproteobacteria	5.31955	50.4	-	LRXN01	94	5571	4851	2/24/16	8/8/17	Scaffold	University of Toronto	SAMN04449833	GCA_001571585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/585/GCA_001571585.1_ASM157158v1	26444104	UM149
Escherichia coli	562	PRJNA310650	310650	Proteobacteria	Gammaproteobacteria	4.97549	50.6	-	LRXQ01	108	5142	4818	2/24/16	2/25/17	Scaffold	University of Toronto	SAMN04449836	GCA_001571595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/595/GCA_001571595.1_ASM157159v1	26444104	CD121
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15752	39.6	-	FDVC01	39	2399	2162	2/9/16	3/13/17	Scaffold	SC	SAMEA2239294	GCA_900026425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/425/GCA_900026425.1_11861_5_69	-	2842STDY5644678
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB2770	204451	Proteobacteria	Gammaproteobacteria	4.75517	52	-	CGSL01	42	4920	4565	4/21/15	2/28/17	Scaffold	SC	SAMEA1687872	GCA_001350435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/350/435/GCA_001350435.1_8616_4_50	-	BCR191
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.7278	32.7	-	FGVE01	16	2842	2679	2/10/16	3/6/17	Contig	SC	SAMEA1464216	GCA_900046425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/425/GCA_900046425.1_7748_6_30	-	st2193
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.76251	32.7	-	FFOV01	46	2877	2697	2/9/16	3/5/17	Contig	SC	SAMEA1469553	GCA_900046795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/795/GCA_900046795.1_8728_5_34	-	st2372
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3164	204701	Proteobacteria	Gammaproteobacteria	4.68079	52.1	-	CGRV01	43	4830	4482	4/21/15	2/28/17	Scaffold	SC	SAMEA1571980	GCA_001355395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/395/GCA_001355395.1_8525_3_41	-	Ke462
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07333	39.7	-	FDWH01	18	2302	2068	2/9/16	3/13/17	Scaffold	SC	SAMEA2238316	GCA_900026435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/435/GCA_900026435.1_11860_4_42	-	2842STDY5643685
Escherichia coli	562	PRJNA310650	310650	Proteobacteria	Gammaproteobacteria	4.9311	50.5	-	LRXP01	90	5070	4716	2/24/16	2/25/17	Scaffold	University of Toronto	SAMN04449835	GCA_001571645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/645/GCA_001571645.1_ASM157164v1	26444104	CD44
Escherichia coli	562	PRJNA310650	310650	Proteobacteria	Gammaproteobacteria	4.8886	50.7	-	LRXS01	65	5089	4774	2/24/16	2/25/17	Scaffold	University of Toronto	SAMN04449838	GCA_001571665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/665/GCA_001571665.1_ASM157166v1	26444104	CD3
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11611	39.6	-	FDXL01	59	2332	2081	2/9/16	3/13/17	Scaffold	SC	SAMEA2238366	GCA_900026445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/445/GCA_900026445.1_11860_4_92	-	2842STDY5643735
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3164	204701	Proteobacteria	Gammaproteobacteria	4.94916	51.8	-	CEZI01	56	5152	4768	3/9/15	2/28/17	Scaffold	SC	SAMEA1571981	GCA_001355415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/415/GCA_001355415.1_8525_3_48	-	Ke469
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78498	32.7	-	FFYL01	43	2876	2732	2/10/16	3/5/17	Contig	SC	SAMEA1317486	GCA_900046835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/835/GCA_900046835.1_7414_7_48	-	st346
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.76327	32.7	-	FGBI01	38	2825	2683	2/10/16	3/5/17	Contig	SC	SAMEA1464624	GCA_900046845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/845/GCA_900046845.1_7712_8_14	-	st674
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3164	204701	Proteobacteria	Gammaproteobacteria	4.93135	51.8	-	CGSH01	55	5118	4748	4/21/15	2/28/17	Scaffold	SC	SAMEA1571987	GCA_001355435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/435/GCA_001355435.1_8525_3_60	-	Ke481
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07082	39.7	-	FDZN01	32	2328	2081	2/9/16	3/13/17	Scaffold	SC	SAMEA2238458	GCA_900026455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/455/GCA_900026455.1_11860_5_88	-	2842STDY5643828
Escherichia coli	562	PRJNA310650	310650	Proteobacteria	Gammaproteobacteria	4.84094	50.5	-	LRXT01	41	4921	4654	2/24/16	2/25/17	Scaffold	University of Toronto	SAMN04449839	GCA_001571675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/675/GCA_001571675.1_ASM157167v1	26444104	UC5
Escherichia coli	562	PRJNA310650	310650	Proteobacteria	Gammaproteobacteria	5.05568	50.5	-	LRXV01	164	5312	4680	2/24/16	2/25/17	Scaffold	University of Toronto	SAMN04449841	GCA_001571685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/685/GCA_001571685.1_ASM157168v1	26444104	CD26
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12513	39.6	-	FDZX01	28	2339	2114	2/9/16	3/13/17	Scaffold	SC	SAMEA2238478	GCA_900026465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/465/GCA_900026465.1_11860_6_12	-	2842STDY5643849
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3164	204701	Proteobacteria	Gammaproteobacteria	4.72332	52	-	CFAO01	43	4882	4518	3/11/15	2/28/17	Scaffold	SC	SAMEA1572000	GCA_001355475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/475/GCA_001355475.1_8525_3_40	-	Ke461
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8283	32.7	-	FGEV01	57	2928	2777	2/10/16	3/5/17	Contig	SC	SAMEA1317466	GCA_900046855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/855/GCA_900046855.1_7414_8_14	-	st530
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8645	32.7	-	FGPS01	52	2997	2828	2/10/16	3/5/17	Contig	SC	SAMEA1317513	GCA_900046865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/865/GCA_900046865.1_7414_8_88	-	st963
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3164	204701	Proteobacteria	Gammaproteobacteria	4.93627	51.8	-	CGSI01	54	5130	4747	4/21/15	2/28/17	Scaffold	SC	SAMEA1572009	GCA_001355495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/495/GCA_001355495.1_8525_3_58	-	Ke479
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02631	39.6	-	FEBH01	18	2224	2001	2/9/16	3/13/17	Scaffold	SC	SAMEA2238540	GCA_900026475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/475/GCA_900026475.1_11860_6_74	-	2842STDY5643911
Escherichia coli	562	PRJNA310650	310650	Proteobacteria	Gammaproteobacteria	4.80201	50.5	-	LRXU01	63	5014	4706	2/24/16	2/25/17	Scaffold	University of Toronto	SAMN04449840	GCA_001571725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/725/GCA_001571725.1_ASM157172v1	26444104	UM128
Escherichia coli	562	PRJNA310650	310650	Proteobacteria	Gammaproteobacteria	5.09665	50.6	-	LRXW01	61	5304	4924	2/24/16	2/25/17	Scaffold	University of Toronto	SAMN04449842	GCA_001571745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/745/GCA_001571745.1_ASM157174v1	26444104	UC37
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04356	39.6	-	FEEO01	35	2218	1998	2/9/16	3/13/17	Scaffold	SC	SAMEA2238693	GCA_900026485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/485/GCA_900026485.1_11861_2_33	-	2842STDY5644066
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3164	204701	Proteobacteria	Gammaproteobacteria	4.92383	51.8	-	CGSF01	51	5104	4730	4/21/15	2/28/17	Scaffold	SC	SAMEA1572016	GCA_001355515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/515/GCA_001355515.1_8525_3_51	-	Ke472
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84443	32.7	-	FGQD01	74	2967	2806	2/10/16	3/6/17	Contig	SC	SAMEA1469647	GCA_900046885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/885/GCA_900046885.1_7480_7_1	-	st1113
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78143	32.7	-	FFPU01	55	2857	2710	2/9/16	3/5/17	Contig	SC	SAMEA1317590	GCA_900047135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/135/GCA_900047135.1_7414_8_85	-	st955
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3164	204701	Proteobacteria	Gammaproteobacteria	4.9377	51.8	-	CGRZ01	50	5140	4752	4/21/15	2/28/17	Scaffold	SC	SAMEA1572046	GCA_001355535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/535/GCA_001355535.1_8525_3_71	-	Ke492
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05606	39.6	-	FEFX01	29	2267	2028	2/9/16	3/13/17	Scaffold	SC	SAMEA2238779	GCA_900026495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/495/GCA_900026495.1_11893_1_22	-	2842STDY5644153
Escherichia coli	562	PRJNA310650	310650	Proteobacteria	Gammaproteobacteria	5.24563	50.5	-	LRXX01	74	5584	5141	2/24/16	2/25/17	Scaffold	University of Toronto	SAMN04449843	GCA_001571755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/755/GCA_001571755.1_ASM157175v1	26444104	UM147
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.62077	50.6	-	LPXZ01	241	6116	5625	2/24/16	2/25/17	Scaffold	FDA/CFSAN	SAMN04338483	GCA_001571835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/835/GCA_001571835.1_ASM157183v1	-	CFSAN025094
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10082	39.5	-	FCRK01	77	2363	2081	2/6/16	3/13/17	Scaffold	SC	SAMEA2239035	GCA_900026505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/505/GCA_900026505.1_11861_4_89	-	2842STDY5644414
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3164	204701	Proteobacteria	Gammaproteobacteria	4.93721	51.8	-	CGSC01	57	5140	4754	4/21/15	2/28/17	Scaffold	SC	SAMEA1572048	GCA_001355555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/555/GCA_001355555.1_8525_3_47	-	Ke468
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79616	32.7	-	FFXR01	61	2888	2743	2/10/16	3/6/17	Contig	SC	SAMEA1464622	GCA_900047155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/155/GCA_900047155.1_7554_6_69	-	st284
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.88395	32.7	-	FFXS01	88	3104	2901	2/10/16	3/6/17	Contig	SC	SAMEA1464199	GCA_900047165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/165/GCA_900047165.1_7554_6_72	-	st297
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3164	204701	Proteobacteria	Gammaproteobacteria	4.93288	51.8	-	CFAH01	51	5136	4751	3/11/15	2/28/17	Scaffold	SC	SAMEA1572051	GCA_001355575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/575/GCA_001355575.1_8525_3_33	-	Ke454
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13863	39.6	-	FCRS01	44	2319	2091	2/6/16	3/5/17	Scaffold	SC	SAMEA2238997	GCA_900026515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/515/GCA_900026515.1_11861_4_51	-	2842STDY5644373
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.76705	50.5	-	LPYC01	223	6259	5746	2/24/16	2/25/17	Scaffold	FDA/CFSAN	SAMN04338471	GCA_001571845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/845/GCA_001571845.1_ASM157184v1	-	CFSAN025098
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.45572	50.6	-	LPYL01	282	5917	5426	2/24/16	2/25/17	Scaffold	FDA/CFSAN	SAMN04338482	GCA_001571995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/571/995/GCA_001571995.1_ASM157199v1	-	CFSAN025108
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08736	39.6	-	FCWP01	32	2273	2047	2/6/16	3/13/17	Scaffold	SC	SAMEA2382568	GCA_900026525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/525/GCA_900026525.1_12673_6_23	-	2842STDY5753108
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72631	52	-	CHMD01	41	4884	4526	4/21/15	2/28/17	Scaffold	SC	SAMEA1572764	GCA_001355595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/595/GCA_001355595.1_8490_6_41	-	MDUST41
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.91059	32.7	-	FFZL01	62	3071	2884	2/10/16	3/5/17	Contig	SC	SAMEA1317582	GCA_900047175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/175/GCA_900047175.1_7414_7_90	-	st489
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82757	32.7	-	FGAG01	65	2929	2775	2/10/16	3/5/17	Contig	SC	SAMEA1317326	GCA_900047185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/185/GCA_900047185.1_7414_8_15	-	st533
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72806	52	-	CGUU01	45	4892	4538	4/21/15	2/28/17	Scaffold	SC	SAMEA1572772	GCA_001355615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/615/GCA_001355615.1_8447_8_28	-	MDUST100
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01761	39.7	-	FCWZ01	29	2245	2002	2/6/16	3/13/17	Scaffold	SC	SAMEA2382572	GCA_900026535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/535/GCA_900026535.1_12673_6_27	-	2842STDY5753112
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.69277	50.5	-	LPYK01	228	6151	5643	2/24/16	2/25/17	Scaffold	FDA/CFSAN	SAMN04338477	GCA_001572005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/005/GCA_001572005.1_ASM157200v1	-	CFSAN025107
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.77474	50.5	-	LPXY01	261	6251	5744	2/24/16	2/25/17	Scaffold	FDA/CFSAN	SAMN04338469	GCA_001572045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/045/GCA_001572045.1_ASM157204v1	-	CFSAN025093
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98784	39.8	-	FCXL01	48	2187	1928	2/6/16	3/13/17	Scaffold	SC	SAMEA2382582	GCA_900026545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/545/GCA_900026545.1_12673_6_37	-	2842STDY5753122
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72584	52	-	CGVA01	43	4892	4533	4/21/15	2/28/17	Scaffold	SC	SAMEA1572774	GCA_001355635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/635/GCA_001355635.1_8490_6_61	-	MDUST61
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77271	32.7	-	FGAA01	31	2868	2702	2/10/16	3/6/17	Contig	SC	SAMEA1464192	GCA_900047195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/195/GCA_900047195.1_7748_6_8	-	st534
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82845	32.7	-	FGAB01	65	2919	2782	2/10/16	3/5/17	Contig	SC	SAMEA1317386	GCA_900047205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/205/GCA_900047205.1_7414_8_18	-	st544
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7224	52	-	CEZG01	46	4882	4523	3/10/15	2/28/17	Scaffold	SC	SAMEA1572775	GCA_001355655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/655/GCA_001355655.1_8490_5_22	-	MDUST22
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11993	39.6	-	FCZU01	55	2335	2083	2/6/16	3/13/17	Scaffold	SC	SAMEA2674710	GCA_900026555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/555/GCA_900026555.1_14412_3_67	-	2842STDY5881950
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.43595	50.6	-	LPYS01	225	5853	5414	2/24/16	2/25/17	Scaffold	FDA/CFSAN	SAMN04338490	GCA_001572135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/135/GCA_001572135.1_ASM157213v1	-	CFSAN025118
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.46384	50.6	-	LPYT01	219	5889	5446	2/24/16	2/25/17	Scaffold	FDA/CFSAN	SAMN04338491	GCA_001572145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/145/GCA_001572145.1_ASM157214v1	-	CFSAN025119
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11344	39.5	-	FDCE01	57	2346	2079	2/6/16	3/13/17	Scaffold	SC	SAMEA2382667	GCA_900026565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/565/GCA_900026565.1_12673_7_27	-	2842STDY5753208
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72081	52	-	CGVH01	42	4884	4527	4/21/15	2/28/17	Scaffold	SC	SAMEA1572779	GCA_001355675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/675/GCA_001355675.1_8490_5_3	-	MDUST3
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83353	32.7	-	FGAE01	53	2924	2784	2/10/16	3/6/17	Contig	SC	SAMEA1317400	GCA_900047215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/215/GCA_900047215.1_7414_8_17	-	st543
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87593	32.7	-	FGAN01	89	3004	2846	2/10/16	3/6/17	Contig	SC	SAMEA1317311	GCA_900047235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/235/GCA_900047235.1_7414_8_32	-	st575
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7234	52	-	CHMQ01	39	4881	4526	4/21/15	2/28/17	Scaffold	SC	SAMEA1572783	GCA_001355695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/695/GCA_001355695.1_8447_8_27	-	MDUST99
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11119	39.6	-	FDFA01	44	2286	2078	2/6/16	3/13/17	Scaffold	SC	SAMEA2382742	GCA_900026575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/575/GCA_900026575.1_12718_4_7	-	2842STDY5753284
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.7553	50.5	-	LPYO01	261	6224	5712	2/24/16	2/25/17	Scaffold	FDA/CFSAN	SAMN04338485	GCA_001572205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/205/GCA_001572205.1_ASM157220v1	-	CFSAN025114
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.46243	50.5	-	LPYP01	226	5901	5454	2/24/16	2/25/17	Scaffold	FDA/CFSAN	SAMN04338486	GCA_001572215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/215/GCA_001572215.1_ASM157221v1	-	CFSAN025115
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01774	39.8	-	FDJH01	19	2255	1991	2/6/16	3/13/17	Scaffold	SC	SAMEA2382859	GCA_900026585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/585/GCA_900026585.1_12718_5_29	-	2842STDY5753402
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.68859	52.1	-	CGRM01	41	4846	4495	4/21/15	2/28/17	Scaffold	SC	SAMEA1572786	GCA_001355715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/715/GCA_001355715.1_8490_6_48	-	MDUST48
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78216	32.7	-	FGAO01	50	2870	2725	2/10/16	3/5/17	Contig	SC	SAMEA1317379	GCA_900047245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/245/GCA_900047245.1_7414_8_33	-	st580
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.74398	32.7	-	FGAQ01	55	2803	2666	2/10/16	3/5/17	Contig	SC	SAMEA1317567	GCA_900047255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/255/GCA_900047255.1_7414_8_36	-	st592
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72183	52	-	CFAT01	45	4881	4526	3/12/15	2/28/17	Scaffold	SC	SAMEA1572789	GCA_001355735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/735/GCA_001355735.1_8490_5_14	-	MDUST14
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09404	39.6	-	FDJN01	38	2281	2056	2/6/16	3/13/17	Scaffold	SC	SAMEA2382865	GCA_900026595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/595/GCA_900026595.1_12718_5_35	-	2842STDY5753408
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.58082	50.6	-	LPYU01	214	6046	5551	2/24/16	2/25/17	Scaffold	FDA/CFSAN	SAMN04338488	GCA_001572245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/245/GCA_001572245.1_ASM157224v1	-	CFSAN025121
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.37523	50.5	-	LPYV01	188	5764	5358	2/24/16	2/26/17	Scaffold	FDA/CFSAN	SAMN04338493	GCA_001572265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/265/GCA_001572265.1_ASM157226v1	-	CFSAN025122
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11	39.7	-	FDKF01	50	2325	2077	2/6/16	3/12/17	Scaffold	SC	SAMEA2382884	GCA_900026605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/605/GCA_900026605.1_12718_5_54	-	2842STDY5753427
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72347	52	-	CGRS01	44	4890	4539	4/21/15	2/28/17	Scaffold	SC	SAMEA1572790	GCA_001355755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/755/GCA_001355755.1_8490_5_2	-	MDUST2
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.90815	32.7	-	FGAS01	63	3060	2884	2/10/16	3/5/17	Contig	SC	SAMEA1317561	GCA_900047265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/265/GCA_900047265.1_7414_8_38	-	st594
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.89043	32.7	-	FGAX01	101	3026	2860	2/10/16	3/6/17	Contig	SC	SAMEA1317488	GCA_900047275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/275/GCA_900047275.1_7414_8_41	-	st614
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72872	52	-	CGRR01	39	4895	4533	4/21/15	2/28/17	Scaffold	SC	SAMEA1572793	GCA_001355775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/775/GCA_001355775.1_8447_8_22	-	MDUST94
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.159	39.6	-	FDKY01	57	2396	2133	2/6/16	3/13/17	Scaffold	SC	SAMEA2382902	GCA_900026615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/615/GCA_900026615.1_12718_5_72	-	2842STDY5753445
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.79354	50.5	-	LPYN01	307	6309	5778	2/24/16	2/25/17	Scaffold	FDA/CFSAN	SAMN04338480	GCA_001572285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/285/GCA_001572285.1_ASM157228v1	-	CFSAN025110
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.38552	50.5	-	LPYM01	286	5774	5366	2/24/16	2/25/17	Scaffold	FDA/CFSAN	SAMN04338478	GCA_001572295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/295/GCA_001572295.1_ASM157229v1	-	CFSAN025109
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12488	39.5	-	FDLD01	30	2347	2107	2/6/16	3/13/17	Scaffold	SC	SAMEA2382908	GCA_900026625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/625/GCA_900026625.1_12718_5_78	-	2842STDY5753451
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7319	52	-	CGRL01	40	4895	4544	4/21/15	2/28/17	Scaffold	SC	SAMEA1572794	GCA_001355795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/795/GCA_001355795.1_8447_8_12	-	MDUST84
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.7892	32.7	-	FGBE01	39	2860	2716	2/10/16	8/21/17	Contig	SC	SAMEA1464386	GCA_900047285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/285/GCA_900047285.1_7712_8_8	-	st660
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79473	32.7	-	FGBF01	58	2894	2738	2/10/16	3/6/17	Contig	SC	SAMEA1464295	GCA_900047295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/295/GCA_900047295.1_7712_8_9	-	st661
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70494	52.1	-	CGRU01	37	4860	4505	4/21/15	2/28/17	Scaffold	SC	SAMEA1572798	GCA_001355815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/815/GCA_001355815.1_8490_6_64	-	MDUST64
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00814	39.7	-	FDLX01	32	2216	1981	2/6/16	3/13/17	Scaffold	SC	SAMEA2382928	GCA_900026635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/635/GCA_900026635.1_12754_1_3	-	2842STDY5753472
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.41697	50.4	-	LPYR01	283	5881	5345	2/24/16	2/25/17	Scaffold	FDA/CFSAN	SAMN04338489	GCA_001572325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/325/GCA_001572325.1_ASM157232v1	-	CFSAN025117
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.62307	50.5	-	LPYQ01	243	6064	5559	2/24/16	2/25/17	Scaffold	FDA/CFSAN	SAMN04338487	GCA_001572345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/345/GCA_001572345.1_ASM157234v1	-	CFSAN025116
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08556	39.6	-	FDLZ01	27	2308	2065	2/6/16	3/13/17	Scaffold	SC	SAMEA2382932	GCA_900026645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/645/GCA_900026645.1_12754_1_7	-	2842STDY5753476
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72196	52	-	CGRW01	44	4875	4514	4/21/15	2/28/17	Scaffold	SC	SAMEA1572799	GCA_001355835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/835/GCA_001355835.1_8490_5_29	-	MDUST29
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83703	32.7	-	FGBH01	44	2958	2783	2/10/16	3/5/17	Contig	SC	SAMEA1464603	GCA_900047305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/305/GCA_900047305.1_7712_8_12	-	st672
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.95243	32.7	-	FGBM01	61	3124	2918	2/10/16	3/5/17	Contig	SC	SAMEA1464632	GCA_900047315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/315/GCA_900047315.1_7712_8_17	-	st678
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72426	52	-	CGRX01	46	4881	4527	4/21/15	2/28/17	Scaffold	SC	SAMEA1572800	GCA_001355855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/855/GCA_001355855.1_8490_5_10	-	MDUST10
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04709	39.6	-	FDOS01	37	2239	2018	2/6/16	3/13/17	Scaffold	SC	SAMEA2383007	GCA_900026655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/655/GCA_900026655.1_12754_1_82	-	2842STDY5753551
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.48759	50.5	-	LPYX01	215	5902	5479	2/24/16	2/25/17	Scaffold	FDA/CFSAN	SAMN04338496	GCA_001572365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/365/GCA_001572365.1_ASM157236v1	-	CFSAN025124
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.38145	50.5	-	LPYY01	181	5750	5339	2/24/16	2/25/17	Scaffold	FDA/CFSAN	SAMN04338494	GCA_001572375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/375/GCA_001572375.1_ASM157237v1	-	CFSAN025126
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06828	39.7	-	FDOV01	20	2278	2046	2/9/16	3/13/17	Scaffold	SC	SAMEA2383010	GCA_900026665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/665/GCA_900026665.1_12754_1_85	-	2842STDY5753554
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72436	52	-	CVJU01	42	4881	4529	4/2/15	2/28/17	Scaffold	SC	SAMEA1572805	GCA_001355875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/875/GCA_001355875.1_8490_5_24	-	MDUST24
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.94806	32.7	-	FGBL01	68	3110	2914	2/10/16	3/5/17	Contig	SC	SAMEA1464648	GCA_900047325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/325/GCA_900047325.1_7712_8_18	-	st679
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80165	32.7	-	FGBQ01	38	2891	2749	2/10/16	3/5/17	Contig	SC	SAMEA1464590	GCA_900047335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/335/GCA_900047335.1_7712_8_26	-	st695
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72931	52	-	CEZS01	42	4893	4530	3/11/15	2/28/17	Scaffold	SC	SAMEA1572808	GCA_001355915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/915/GCA_001355915.1_8447_8_2	-	MDUST74
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99028	39.8	-	FDQE01	50	2181	1932	2/9/16	3/13/17	Scaffold	SC	SAMEA2383046	GCA_900026675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/675/GCA_900026675.1_12754_2_26	-	2842STDY5753591
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.60078	50.5	-	LPYW01	205	6055	5567	2/24/16	2/25/17	Scaffold	FDA/CFSAN	SAMN04338498	GCA_001572425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/425/GCA_001572425.1_ASM157242v1	-	CFSAN025123
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.69691	50.5	-	LPYZ01	251	6151	5646	2/24/16	2/25/17	Scaffold	FDA/CFSAN	SAMN04338495	GCA_001572445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/445/GCA_001572445.1_ASM157244v1	-	CFSAN025127
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07572	39.6	-	FEIF01	39	2282	2026	2/9/16	3/13/17	Scaffold	SC	SAMEA2383113	GCA_900026685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/685/GCA_900026685.1_12754_2_93	-	2842STDY5753658
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72993	52	-	CGRP01	39	4887	4529	4/21/15	2/28/17	Scaffold	SC	SAMEA1572816	GCA_001355975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/975/GCA_001355975.1_8490_6_37	-	MDUST37
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80315	32.7	-	FGBU01	44	2893	2746	2/10/16	3/5/17	Contig	SC	SAMEA1464378	GCA_900047345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/345/GCA_900047345.1_7712_8_32	-	st704
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8358	32.7	-	FGBV01	47	2937	2776	2/10/16	3/5/17	Contig	SC	SAMEA1464385	GCA_900047355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/355/GCA_900047355.1_7712_8_33	-	st706
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72346	52	-	CGUV01	44	4886	4531	4/21/15	2/28/17	Scaffold	SC	SAMEA1572817	GCA_001355995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/355/995/GCA_001355995.1_8447_8_33	-	MDUST105
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07731	39.6	-	FEIY01	34	2285	2042	2/9/16	3/13/17	Scaffold	SC	SAMEA2383132	GCA_900026695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/695/GCA_900026695.1_12754_3_17	-	2842STDY5753678
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.54873	50.5	-	LPZA01	251	6047	5564	2/24/16	2/25/17	Scaffold	FDA/CFSAN	SAMN04338503	GCA_001572485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/485/GCA_001572485.1_ASM157248v1	-	CFSAN025128
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.78607	50.5	-	LPZD01	244	6276	5770	2/24/16	2/25/17	Scaffold	FDA/CFSAN	SAMN04338475	GCA_001572525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/525/GCA_001572525.1_ASM157252v1	-	CFSAN025105
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08181	39.6	-	FEMC01	35	2277	2035	2/9/16	3/15/17	Scaffold	SC	SAMEA2383214	GCA_900026705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/705/GCA_900026705.1_12754_4_4	-	2842STDY5753761
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.75446	52	-	CGUY01	43	4935	4566	4/21/15	2/28/17	Scaffold	SC	SAMEA1572818	GCA_001356015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/015/GCA_001356015.1_8490_6_46	-	MDUST46
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82051	32.7	-	FGBX01	47	2934	2770	2/10/16	3/5/17	Contig	SC	SAMEA1464347	GCA_900047365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/365/GCA_900047365.1_7712_8_36	-	st716
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83126	32.7	-	FGBY01	56	2936	2780	2/10/16	3/5/17	Contig	SC	SAMEA1464465	GCA_900047375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/375/GCA_900047375.1_7712_8_39	-	st731
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72603	52	-	CGRI01	44	4888	4532	4/21/15	2/28/17	Scaffold	SC	SAMEA1572819	GCA_001356035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/035/GCA_001356035.1_8447_8_29	-	MDUST101
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10646	39.7	-	FEOP01	49	2333	2069	2/9/16	3/5/17	Scaffold	SC	SAMEA2674635	GCA_900026715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/026/715/GCA_900026715.1_14412_3_13	-	2842STDY5881895
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.743	50.5	-	LPZC01	265	6217	5710	2/24/16	2/25/17	Scaffold	FDA/CFSAN	SAMN04338502	GCA_001572535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/572/535/GCA_001572535.1_ASM157253v1	-	CFSAN025130
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.68174	50.7	-	LONX01	85	4798	4504	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334716	GCA_001575275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/275/GCA_001575275.1_ASM157527v1	-	G188
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0807	39.6	-	FEAM01	65	2287	2026	2/9/16	3/13/17	Scaffold	SC	SAMEA2238501	GCA_900027025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/025/GCA_900027025.1_11860_6_35	-	2842STDY5643872
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70095	52.1	-	CEZJ01	41	4855	4497	3/11/15	2/28/17	Scaffold	SC	SAMEA1572821	GCA_001356055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/055/GCA_001356055.1_8447_8_1	-	MDUST73
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.95479	32.7	-	FGCA01	56	3119	2923	2/10/16	3/5/17	Contig	SC	SAMEA1464452	GCA_900047385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/385/GCA_900047385.1_7712_8_41	-	st736
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84676	32.7	-	FGCF01	74	2960	2797	2/10/16	3/5/17	Contig	SC	SAMEA1464679	GCA_900047395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/395/GCA_900047395.1_7712_8_48	-	st763
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7303	52	-	CEZF01	44	4887	4525	3/13/15	2/28/17	Scaffold	SC	SAMEA1572822	GCA_001356075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/075/GCA_001356075.1_8490_6_52	-	MDUST52
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08598	39.6	-	FECU01	66	2321	2021	2/9/16	3/13/17	Scaffold	SC	SAMEA2238602	GCA_900027035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/035/GCA_900027035.1_11861_1_39	-	2842STDY5643974
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.69219	50.9	-	LOOB01	131	4854	4516	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334720	GCA_001575285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/285/GCA_001575285.1_ASM157528v1	-	G195
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.86029	50.7	-	LOOC01	97	5069	4751	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334721	GCA_001575295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/295/GCA_001575295.1_ASM157529v1	-	G196
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98948	39.8	-	FEJC01	40	2190	1939	2/9/16	3/13/17	Scaffold	SC	SAMEA2383136	GCA_900027045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/045/GCA_900027045.1_12754_3_21	-	2842STDY5753682
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73086	52	-	CVJY01	43	4899	4539	4/2/15	2/28/17	Scaffold	SC	SAMEA1572823	GCA_001356095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/095/GCA_001356095.1_8490_5_7	-	MDUST7
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82817	32.7	-	FGCO01	62	2923	2770	2/10/16	3/5/17	Contig	SC	SAMEA1464595	GCA_900047405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/405/GCA_900047405.1_7712_8_61	-	st798
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82232	32.7	-	FGCT01	47	2916	2768	2/10/16	3/5/17	Contig	SC	SAMEA1464579	GCA_900047415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/415/GCA_900047415.1_7712_8_63	-	st803
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72992	52	-	CGRK01	46	4897	4539	4/21/15	2/28/17	Scaffold	SC	SAMEA1572825	GCA_001356135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/135/GCA_001356135.1_8490_5_17	-	MDUST17
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12694	39.7	-	FDRY01	43	2366	2131	2/9/16	3/6/17	Scaffold	SC	SAMEA2239123	GCA_900027085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/085/GCA_900027085.1_11860_7_84	-	2842STDY5644504
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.79878	50.7	-	LONY01	87	4974	4681	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334717	GCA_001575305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/305/GCA_001575305.1_ASM157530v1	-	G19
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.78573	50.6	-	LONZ01	86	4928	4609	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334718	GCA_001575355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/355/GCA_001575355.1_ASM157535v1	-	G190
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09912	39.5	-	FDQS01	44	2289	2026	2/9/16	3/13/17	Scaffold	SC	SAMEA2239119	GCA_900027095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/095/GCA_900027095.1_11860_7_80	-	2842STDY5644500
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73625	52	-	CEXD01	50	4898	4535	3/10/15	2/28/17	Scaffold	SC	SAMEA1572839	GCA_001356175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/175/GCA_001356175.1_8490_5_19	-	MDUST19
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82242	32.7	-	FGCP01	43	2917	2762	2/10/16	3/5/17	Contig	SC	SAMEA1464515	GCA_900047425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/425/GCA_900047425.1_7712_8_60	-	st793
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.89276	32.7	-	FGCR01	53	3046	2851	2/10/16	3/6/17	Contig	SC	SAMEA1464467	GCA_900047435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/435/GCA_900047435.1_7712_8_66	-	st808
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72973	52	-	CGRQ01	45	4891	4532	4/21/15	2/28/17	Scaffold	SC	SAMEA1572841	GCA_001356195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/195/GCA_001356195.1_8490_6_71	-	MDUST71
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06241	39.6	-	FDTF01	18	2277	2044	2/9/16	3/13/17	Scaffold	SC	SAMEA2239214	GCA_900027105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/105/GCA_900027105.1_11860_8_82	-	2842STDY5644596
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	5.02909	50.6	-	LOOE01	108	5267	4946	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334723	GCA_001575375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/375/GCA_001575375.1_ASM157537v1	-	G201
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	5.01985	50.6	-	LOOD01	69	5243	4920	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334722	GCA_001575385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/385/GCA_001575385.1_ASM157538v1	-	G200
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98971	39.8	-	FDWX01	54	2197	1929	2/9/16	3/13/17	Scaffold	SC	SAMEA2238347	GCA_900027115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/115/GCA_900027115.1_11860_4_74	-	2842STDY5643716
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.68731	52.1	-	CEZX01	41	4838	4485	3/10/15	2/28/17	Scaffold	SC	SAMEA1572842	GCA_001356215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/215/GCA_001356215.1_8490_6_44	-	MDUST44
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82923	32.7	-	FGDE01	55	2908	2762	2/10/16	8/21/17	Contig	SC	SAMEA1317510	GCA_900047445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/445/GCA_900047445.1_7414_7_13	-	st40
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87555	32.7	-	FGDD01	44	3028	2907	2/10/16	3/5/17	Contig	SC	SAMEA1317407	GCA_900047455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/455/GCA_900047455.1_7414_7_19	-	st56
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.704	52.1	-	CGSE01	44	4866	4509	4/21/15	2/28/17	Scaffold	SC	SAMEA1572843	GCA_001356235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/235/GCA_001356235.1_8490_6_57	-	MDUST57
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.03623	39.7	-	FDWY01	18	2241	2028	2/9/16	3/13/17	Scaffold	SC	SAMEA2238348	GCA_900027125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/125/GCA_900027125.1_11860_4_75	-	2842STDY5643717
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.83841	50.8	-	LOOA01	94	5048	4729	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334719	GCA_001575395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/395/GCA_001575395.1_ASM157539v1	-	G194
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.9067	50.6	-	LOOK01	101	5121	4772	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334729	GCA_001575435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/435/GCA_001575435.1_ASM157543v1	-	G220
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12216	39.6	-	FEDQ01	32	2316	2084	2/9/16	3/6/17	Scaffold	SC	SAMEA2238644	GCA_900027135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/135/GCA_900027135.1_11822_8_42	-	2842STDY5644016
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71945	52	-	CGRT01	38	4873	4520	4/21/15	2/28/17	Scaffold	SC	SAMEA1572846	GCA_001356275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/275/GCA_001356275.1_8490_5_34	-	MDUST34
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78728	32.7	-	FGDG01	60	2865	2717	2/10/16	3/5/17	Contig	SC	SAMEA1317439	GCA_900047465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/465/GCA_900047465.1_7414_7_28	-	st72
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79666	32.7	-	FGDH01	60	2888	2742	2/10/16	3/5/17	Contig	SC	SAMEA1317312	GCA_900047475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/475/GCA_900047475.1_7414_7_37	-	st87
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7249	52	-	CHMC01	46	4897	4537	4/21/15	2/28/17	Scaffold	SC	SAMEA1572852	GCA_001356295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/295/GCA_001356295.1_8490_6_70	-	MDUST70
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10946	39.6	-	FEDR01	24	2314	2086	2/9/16	3/5/17	Scaffold	SC	SAMEA2238646	GCA_900027145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/145/GCA_900027145.1_11822_8_44	-	2842STDY5644018
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.88271	50.5	-	LOOG01	68	5062	4722	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334725	GCA_001575455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/455/GCA_001575455.1_ASM157545v1	-	G211
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.89342	50.7	-	LOOL01	70	5045	4738	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334730	GCA_001575465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/465/GCA_001575465.1_ASM157546v1	-	G222
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02934	39.6	-	FCSA01	51	2220	1990	2/6/16	3/13/17	Scaffold	SC	SAMEA2239047	GCA_900027155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/155/GCA_900027155.1_11860_7_5	-	2842STDY5644426
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72564	52	-	CGRY01	44	4880	4521	4/21/15	2/28/17	Scaffold	SC	SAMEA1572854	GCA_001356315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/315/GCA_001356315.1_8447_8_8	-	MDUST80
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87348	32.7	-	FGDJ01	72	3056	2891	2/10/16	3/5/17	Contig	SC	SAMEA1464292	GCA_900047485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/485/GCA_900047485.1_7554_6_3	-	st110
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83163	32.7	-	FGDM01	52	2936	2779	2/10/16	3/5/17	Contig	SC	SAMEA1464274	GCA_900047495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/495/GCA_900047495.1_7554_6_12	-	st128
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72872	52	-	CGVE01	46	4895	4538	4/21/15	2/28/17	Scaffold	SC	SAMEA1572858	GCA_001356335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/335/GCA_001356335.1_8447_8_18	-	MDUST90
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04169	39.6	-	FCRT01	47	2267	2006	2/6/16	3/13/17	Scaffold	SC	SAMEA2239061	GCA_900027165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/165/GCA_900027165.1_11860_7_20	-	2842STDY5644441
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.64127	50.9	-	LOOI01	117	4773	4448	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334727	GCA_001575475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/475/GCA_001575475.1_ASM157547v1	-	G214
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.90311	50.4	-	LOOJ01	117	5098	4747	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334728	GCA_001575515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/515/GCA_001575515.1_ASM157551v1	-	G215
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05734	39.6	-	FCTN01	40	2209	2009	2/6/16	3/12/17	Scaffold	SC	SAMEA2382553	GCA_900027175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/175/GCA_900027175.1_12673_6_8	-	2842STDY5753093
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.76342	52.1	-	CEWV01	48	4929	4549	3/10/15	3/1/17	Scaffold	SC	SAMEA1903845	GCA_001356435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/435/GCA_001356435.1_9475_6_17	-	1007914
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.96871	32.6	-	FGEC01	63	3121	2936	2/10/16	3/5/17	Contig	SC	SAMEA1464675	GCA_900047505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/505/GCA_900047505.1_7554_6_79	-	st308
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82891	32.7	-	FGEE01	60	2925	2776	2/10/16	3/5/17	Contig	SC	SAMEA1464689	GCA_900047515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/515/GCA_900047515.1_7554_6_87	-	st328
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74991	52.1	-	CGSN01	43	4913	4548	4/21/15	2/28/17	Scaffold	SC	SAMEA1903859	GCA_001356495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/495/GCA_001356495.1_9475_6_32	-	1030630
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13121	39.6	-	FCVR01	38	2338	2113	2/6/16	3/6/17	Scaffold	SC	SAMEA2382561	GCA_900027185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/185/GCA_900027185.1_12673_6_16	-	2842STDY5753101
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.84386	50.5	-	LOOM01	110	5019	4689	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334731	GCA_001575535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/535/GCA_001575535.1_ASM157553v1	-	G224
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.9979	50.8	-	LOOH01	129	5195	4827	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334726	GCA_001575545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/545/GCA_001575545.1_ASM157554v1	-	G213
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11736	39.5	-	FCWY01	52	2343	2076	2/6/16	3/13/17	Scaffold	SC	SAMEA2382571	GCA_900027195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/195/GCA_900027195.1_12673_6_26	-	2842STDY5753111
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72595	52	-	CGVO01	42	4880	4517	4/21/15	2/28/17	Scaffold	SC	SAMEA1903875	GCA_001356555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/555/GCA_001356555.1_9475_6_49	-	1013803
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86932	32.7	-	FFPR01	60	2995	2845	2/9/16	3/5/17	Contig	SC	SAMEA1469559	GCA_900048085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/085/GCA_900048085.1_7480_8_79	-	st2492
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82732	32.7	-	FFQF01	38	2930	2771	2/9/16	3/6/17	Contig	SC	SAMEA1568641	GCA_900048095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/095/GCA_900048095.1_8490_3_5	-	st845
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74638	52.1	-	CEZH01	48	4908	4545	3/10/15	2/28/17	Scaffold	SC	SAMEA1903880	GCA_001356615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/615/GCA_001356615.1_9475_6_54	-	1023999
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06899	39.7	-	FCYQ01	53	2258	2022	2/6/16	3/6/17	Scaffold	SC	SAMEA2674566	GCA_900027205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/205/GCA_900027205.1_14355_8_39	-	2842STDY5881826
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	5.0117	50.6	-	LOOO01	80	5257	4902	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334733	GCA_001575555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/555/GCA_001575555.1_ASM157555v1	-	G229
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.80911	50.6	-	LOOP01	76	4986	4677	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334734	GCA_001575595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/595/GCA_001575595.1_ASM157559v1	-	G233
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98853	39.8	-	FCYP01	48	2183	1925	2/6/16	3/13/17	Scaffold	SC	SAMEA2238991	GCA_900027215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/215/GCA_900027215.1_11861_4_45	-	2842STDY5644367
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.8945	51.9	-	CIBR01	41	5090	4716	4/21/15	2/28/17	Scaffold	SC	SAMEA1903898	GCA_001356635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/635/GCA_001356635.1_9475_6_72	-	A55865
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.94246	32.7	-	FFZO01	66	3095	2910	2/10/16	3/5/17	Contig	SC	SAMEA1317553	GCA_900048135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/135/GCA_900048135.1_7414_7_93	-	st495
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81118	32.7	-	FFZR01	51	2920	2788	2/10/16	3/5/17	Contig	SC	SAMEA1317353	GCA_900048145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/145/GCA_900048145.1_7414_8_2	-	st502
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.85024	51.9	-	CGNK01	166	5017	4625	4/21/15	2/28/17	Scaffold	SC	SAMEA1929434	GCA_001356715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/715/GCA_001356715.1_10592_2_20	-	1041
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.03204	39.7	-	FCYZ01	36	2252	2012	2/6/16	3/5/17	Scaffold	SC	SAMEA2674607	GCA_900027225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/225/GCA_900027225.1_14355_8_80	-	2842STDY5881867
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.5715	50.8	-	LOOQ01	74	4671	4381	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334735	GCA_001575615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/615/GCA_001575615.1_ASM157561v1	-	G235
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	5.0305	50.5	-	LOOR01	103	5219	4881	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334736	GCA_001575625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/625/GCA_001575625.1_ASM157562v1	-	G236
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01503	39.7	-	FDBG01	23	2246	2007	2/6/16	3/12/17	Scaffold	SC	SAMEA2382643	GCA_900027235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/235/GCA_900027235.1_12673_7_3	-	2842STDY5753184
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73372	52.1	-	CGNH01	42	4931	4560	4/21/15	2/28/17	Scaffold	SC	SAMEA1929436	GCA_001356735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/735/GCA_001356735.1_10592_2_29	-	11110
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82115	32.7	-	FFZQ01	60	2917	2765	2/10/16	3/6/17	Contig	SC	SAMEA1317433	GCA_900048155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/155/GCA_900048155.1_7414_8_3	-	st504
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79048	32.7	-	FFZP01	36	2875	2728	2/10/16	3/6/17	Contig	SC	SAMEA1464501	GCA_900048165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/165/GCA_900048165.1_7564_8_2	-	st508
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72101	52	-	CGNT01	43	4883	4516	4/21/15	2/28/17	Scaffold	SC	SAMEA1929439	GCA_001356755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/755/GCA_001356755.1_10592_2_28	-	2176
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07727	39.7	-	FDCG01	38	2288	2047	2/6/16	3/13/17	Scaffold	SC	SAMEA2382669	GCA_900027245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/245/GCA_900027245.1_12673_7_29	-	2842STDY5753210
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.5696	50.9	-	LOOU01	99	4629	4351	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334739	GCA_001575635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/635/GCA_001575635.1_ASM157563v1	-	G240
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.87699	50.7	-	LOOS01	133	5102	4755	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334737	GCA_001575675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/675/GCA_001575675.1_ASM157567v1	-	G237
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04028	39.7	-	FDCH01	25	2253	2014	2/6/16	3/15/17	Scaffold	SC	SAMEA2382671	GCA_900027255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/255/GCA_900027255.1_12673_7_31	-	2842STDY5753212
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.88348	51.8	-	CVLO01	266	5037	4647	4/9/15	2/28/17	Scaffold	SC	SAMEA1929448	GCA_001356795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/795/GCA_001356795.1_10592_2_33	-	3769
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83774	32.6	-	FGGD01	80	2922	2757	2/10/16	3/5/17	Contig	SC	SAMEA1317549	GCA_900048175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/175/GCA_900048175.1_7414_8_51	-	st876
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.94755	32.7	-	FGRX01	68	3104	2912	2/10/16	3/5/17	Contig	SC	SAMEA1464468	GCA_900048185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/185/GCA_900048185.1_7521_6_55	-	st1632
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.77994	51.9	-	CIGZ01	47	4962	4619	4/21/15	2/28/17	Scaffold	SC	SAMEA1929453	GCA_001356815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/815/GCA_001356815.1_10592_2_34	-	7415
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.18084	39.5	-	FDCM01	36	2426	2174	2/6/16	3/13/17	Scaffold	SC	SAMEA2382675	GCA_900027265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/265/GCA_900027265.1_12673_7_35	-	2842STDY5753216
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.5683	50.9	-	LOOT01	94	4640	4353	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334738	GCA_001575695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/695/GCA_001575695.1_ASM157569v1	-	G239
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.68443	50.8	-	LOON01	69	4754	4492	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334732	GCA_001575705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/705/GCA_001575705.1_ASM157570v1	-	G228
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05669	39.6	-	FDEG01	35	2218	2015	2/6/16	3/13/17	Scaffold	SC	SAMEA2382722	GCA_900027275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/275/GCA_900027275.1_12673_7_82	-	2842STDY5753263
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69641	52.1	-	CGUJ01	45	4854	4496	4/21/15	2/28/17	Scaffold	SC	SAMEA1929462	GCA_001356875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/875/GCA_001356875.1_10592_2_25	-	20911
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.94705	32.7	-	FGVY01	68	3102	2923	2/10/16	3/5/17	Contig	SC	SAMEA1469596	GCA_900048195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/195/GCA_900048195.1_7480_8_35	-	st2298
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80352	32.7	-	FGWC01	54	2901	2749	2/10/16	3/5/17	Contig	SC	SAMEA1469685	GCA_900048205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/205/GCA_900048205.1_7480_8_38	-	st2313
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72417	52	-	CGNR01	47	4891	4528	4/21/15	2/28/17	Scaffold	SC	SAMEA1930142	GCA_001356915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/915/GCA_001356915.1_10592_2_66	-	E96-12081
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98974	39.7	-	FDGD01	29	2182	1957	2/6/16	3/13/17	Scaffold	SC	SAMEA2382771	GCA_900027285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/285/GCA_900027285.1_12718_4_36	-	2842STDY5753313
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.70616	50.8	-	LONI01	97	4856	4557	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334701	GCA_001575715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/715/GCA_001575715.1_ASM157571v1	-	G109
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.68575	50.7	-	LONJ01	51	4782	4525	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334702	GCA_001575755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/755/GCA_001575755.1_ASM157575v1	-	G111
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02521	39.7	-	FDHW01	52	2206	1960	2/6/16	3/12/17	Scaffold	SC	SAMEA2382816	GCA_900027295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/295/GCA_900027295.1_12718_4_81	-	2842STDY5753358
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.68088	52.1	-	CGOA01	47	4830	4479	4/21/15	2/28/17	Scaffold	SC	SAMEA1930143	GCA_001356935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/356/935/GCA_001356935.1_10592_2_48	-	E97-3246
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84183	32.7	-	FGWJ01	68	2957	2804	2/10/16	3/5/17	Contig	SC	SAMEA1469635	GCA_900048215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/215/GCA_900048215.1_7480_8_47	-	st2380
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79361	32.7	-	FGWM01	52	2898	2743	2/10/16	3/5/17	Contig	SC	SAMEA1469636	GCA_900048225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/225/GCA_900048225.1_7480_8_48	-	st2388
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73578	52.1	-	CGNX01	45	4903	4536	4/21/15	2/28/17	Scaffold	SC	SAMEA1930151	GCA_001357015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/015/GCA_001357015.1_10592_2_51	-	E99-4879
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.97484	39.8	-	FDJJ01	25	2180	1933	2/6/16	3/6/17	Scaffold	SC	SAMEA2382861	GCA_900027305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/305/GCA_900027305.1_12718_5_31	-	2842STDY5753404
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.90027	50.7	-	LONK01	131	5069	4739	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334703	GCA_001575775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/775/GCA_001575775.1_ASM157577v1	-	G114
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	5.04159	50.7	-	LONM01	142	5304	4935	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334705	GCA_001575785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/785/GCA_001575785.1_ASM157578v1	-	G15
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99132	39.8	-	FDMU01	48	2189	1934	2/6/16	3/6/17	Scaffold	SC	SAMEA2382954	GCA_900027315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/315/GCA_900027315.1_12754_1_29	-	2842STDY5753498
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72584	52.1	-	CGNN01	48	4885	4526	4/21/15	2/28/17	Scaffold	SC	SAMEA1930152	GCA_001357035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/035/GCA_001357035.1_10593_2_43	-	E00-7878
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.92906	32.7	-	FGWL01	59	3080	2897	2/10/16	3/5/17	Contig	SC	SAMEA1469602	GCA_900048235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/235/GCA_900048235.1_7480_8_51	-	st2398
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79486	32.7	-	FGWN01	57	2868	2717	2/10/16	3/6/17	Contig	SC	SAMEA1469535	GCA_900048245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/245/GCA_900048245.1_7480_8_53	-	st2406
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.76188	52	-	CGNM01	55	4947	4581	4/21/15	2/28/17	Scaffold	SC	SAMEA1930163	GCA_001357115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/115/GCA_001357115.1_10592_2_44	-	E00-1382
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1039	39.6	-	FDOY01	39	2305	2049	2/9/16	3/13/17	Scaffold	SC	SAMEA2383013	GCA_900027325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/325/GCA_900027325.1_12754_1_88	-	2842STDY5753557
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.92143	50.6	-	LONO01	79	5112	4775	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334707	GCA_001575795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/795/GCA_001575795.1_ASM157579v1	-	G158
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.69308	51	-	LONL01	145	4813	4491	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334704	GCA_001575835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/835/GCA_001575835.1_ASM157583v1	-	G138
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00969	39.7	-	FDPX01	33	2216	1981	2/9/16	3/13/17	Scaffold	SC	SAMEA2383039	GCA_900027345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/345/GCA_900027345.1_12754_2_19	-	2842STDY5753584
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71584	52.1	-	CEZB01	46	4902	4530	3/10/15	2/28/17	Scaffold	SC	SAMEA1930164	GCA_001357135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/135/GCA_001357135.1_10593_2_5	-	E00-2756
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8662	32.7	-	FGWO01	81	2979	2829	2/10/16	3/6/17	Contig	SC	SAMEA1469555	GCA_900048255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/255/GCA_900048255.1_7480_8_54	-	st2408
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79021	32.7	-	FGWP01	58	2888	2742	2/10/16	3/6/17	Contig	SC	SAMEA1469549	GCA_900048265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/265/GCA_900048265.1_7480_8_56	-	st2412
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73713	52.1	-	CGOV01	52	4903	4555	4/21/15	2/28/17	Scaffold	SC	SAMEA1930165	GCA_001357155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/155/GCA_001357155.1_10593_2_59	-	E00-3201
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98828	39.8	-	FEKL01	49	2219	1945	2/9/16	3/13/17	Scaffold	SC	SAMEA2383171	GCA_900027355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/355/GCA_900027355.1_12754_3_56	-	2842STDY5753717
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.76204	50.9	-	LONP01	66	4863	4574	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334708	GCA_001575855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/855/GCA_001575855.1_ASM157585v1	-	G16
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.72624	50.9	-	LONN01	93	4903	4612	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334706	GCA_001575865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/865/GCA_001575865.1_ASM157586v1	-	G150
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.9924	39.8	-	FELC01	50	2192	1924	2/9/16	3/6/17	Scaffold	SC	SAMEA2383188	GCA_900027365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/365/GCA_900027365.1_12754_3_73	-	2842STDY5753734
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.80414	52.1	-	CFAE01	45	4976	4619	3/10/15	2/28/17	Scaffold	SC	SAMEA1930167	GCA_001357195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/195/GCA_001357195.1_10592_2_69	-	E02-0530
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78654	32.7	-	FGWQ01	59	2873	2727	2/10/16	3/5/17	Contig	SC	SAMEA1469550	GCA_900048275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/275/GCA_900048275.1_7480_8_57	-	st2414
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83085	32.7	-	FGWS01	70	2928	2770	2/10/16	3/5/17	Contig	SC	SAMEA1469715	GCA_900048285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/285/GCA_900048285.1_7480_8_59	-	st2420
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69745	52.1	-	CGOK01	42	4853	4507	4/21/15	2/28/17	Scaffold	SC	SAMEA1930169	GCA_001357215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/215/GCA_001357215.1_10593_2_41	-	E00-6599
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98664	39.7	-	FELL01	18	2193	1970	2/9/16	3/6/17	Scaffold	SC	SAMEA2383197	GCA_900027375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/375/GCA_900027375.1_12754_3_82	-	2842STDY5753743
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.87388	50.7	-	LONQ01	64	5070	4759	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334709	GCA_001575885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/885/GCA_001575885.1_ASM157588v1	-	G169
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.76256	50.9	-	LONR01	64	4876	4579	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334710	GCA_001575915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/915/GCA_001575915.1_ASM157591v1	-	G17
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0785	39.6	-	FENA01	24	2305	2070	2/9/16	3/13/17	Scaffold	SC	SAMEA2383240	GCA_900027385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/385/GCA_900027385.1_12754_4_30	-	2842STDY5753787
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73015	52.1	-	CGNA01	46	4910	4547	4/21/15	2/28/17	Scaffold	SC	SAMEA1930170	GCA_001357235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/235/GCA_001357235.1_10592_2_67	-	E97-2307
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8223	32.8	-	FGWR01	59	2930	2784	2/10/16	3/5/17	Contig	SC	SAMEA1469722	GCA_900048295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/295/GCA_900048295.1_7480_8_62	-	st2431
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.88687	32.7	-	FGWT01	100	3004	2857	2/10/16	3/5/17	Contig	SC	SAMEA1469718	GCA_900048305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/305/GCA_900048305.1_7480_8_60	-	st2424
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74325	52.1	-	CGOJ01	43	4910	4545	4/21/15	2/28/17	Scaffold	SC	SAMEA1930182	GCA_001357315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/315/GCA_001357315.1_10593_2_13	-	E99-9082
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09837	39.5	-	FEOZ01	42	2301	2038	2/9/16	3/8/17	Scaffold	SC	SAMEA2674684	GCA_900027395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/395/GCA_900027395.1_14412_3_54	-	2842STDY5881937
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.76054	50.8	-	LONT01	114	4939	4605	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334712	GCA_001575935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/935/GCA_001575935.1_ASM157593v1	-	G180
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.85486	50.8	-	LONU01	96	5041	4722	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334713	GCA_001575945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/945/GCA_001575945.1_ASM157594v1	-	G184
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13769	39.5	-	FDRJ01	36	2354	2094	2/9/16	3/5/17	Scaffold	SC	SAMEA2239116	GCA_900027515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/515/GCA_900027515.1_11860_7_77	-	2842STDY5644497
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.90836	51.9	-	CGPA01	53	5131	4743	4/21/15	2/28/17	Scaffold	SC	SAMEA1930205	GCA_001357415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/415/GCA_001357415.1_10593_2_58	-	Apr-45
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78872	32.8	-	FGWU01	42	2883	2719	2/10/16	3/5/17	Contig	SC	SAMEA1469667	GCA_900048315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/315/GCA_900048315.1_7480_8_63	-	st2436
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80205	32.7	-	FGWW01	45	2893	2750	2/10/16	3/6/17	Contig	SC	SAMEA1469655	GCA_900048325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/325/GCA_900048325.1_7480_8_66	-	st2451
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.89914	51.9	-	CGNZ01	50	5107	4744	4/21/15	2/28/17	Scaffold	SC	SAMEA1930206	GCA_001357435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/435/GCA_001357435.1_10593_2_17	-	Apr-67
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05754	39.5	-	FDZY01	37	2283	2040	2/9/16	3/13/17	Scaffold	SC	SAMEA2238480	GCA_900027525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/525/GCA_900027525.1_11860_6_13	-	2842STDY5643851
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	5.07761	50.5	-	LONS01	204	5337	4942	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334711	GCA_001575965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/965/GCA_001575965.1_ASM157596v1	-	G177
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.76939	50.5	-	LOOV01	94	4960	4604	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334740	GCA_001575995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/575/995/GCA_001575995.1_ASM157599v1	-	G246
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99177	39.8	-	FEAH01	45	2188	1937	2/9/16	3/13/17	Scaffold	SC	SAMEA2238493	GCA_900027535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/535/GCA_900027535.1_11860_6_26	-	2842STDY5643864
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.90899	51.9	-	CGOX01	69	5138	4737	4/21/15	2/28/17	Scaffold	SC	SAMEA1930211	GCA_001357475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/475/GCA_001357475.1_10593_2_62	-	06-1513
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8118	32.7	-	FGWX01	61	2906	2755	2/10/16	3/5/17	Contig	SC	SAMEA1469653	GCA_900048335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/335/GCA_900048335.1_7480_8_68	-	st2457
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.74684	32.7	-	FGWY01	55	2833	2678	2/10/16	3/5/17	Contig	SC	SAMEA1469662	GCA_900048345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/345/GCA_900048345.1_7480_8_69	-	st2465
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.94938	51.9	-	CGOP01	50	5153	4783	4/21/15	2/28/17	Scaffold	SC	SAMEA1930213	GCA_001357495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/495/GCA_001357495.1_10593_2_66	-	Jun-29
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06311	39.7	-	FECK01	22	2264	2049	2/9/16	3/5/17	Scaffold	SC	SAMEA2238583	GCA_900027545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/545/GCA_900027545.1_11861_1_20	-	2842STDY5643955
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	5.11879	50.6	-	LOPF01	123	5351	4995	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334750	GCA_001576015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/015/GCA_001576015.1_ASM157601v1	-	G310
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.76325	50.6	-	LOOW01	63	4910	4622	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334741	GCA_001576025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/025/GCA_001576025.1_ASM157602v1	-	G250
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.17267	39.6	-	FECS01	45	2378	2137	2/9/16	3/13/17	Scaffold	SC	SAMEA2238596	GCA_900027555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/555/GCA_900027555.1_11861_1_34	-	2842STDY5643968
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73165	52.1	-	CGMZ01	46	4913	4557	4/21/15	2/28/17	Scaffold	SC	SAMEA1930215	GCA_001357515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/515/GCA_001357515.1_10592_2_77	-	Jun-73
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85552	32.7	-	FGWZ01	95	2986	2830	2/10/16	3/5/17	Contig	SC	SAMEA1469644	GCA_900048355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/355/GCA_900048355.1_7480_8_71	-	st2468
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82936	32.7	-	FGXB01	61	2933	2786	2/10/16	3/5/17	Contig	SC	SAMEA1469591	GCA_900048375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/375/GCA_900048375.1_7480_8_74	-	st2476
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.94994	51.9	-	CGPB01	51	5162	4787	4/21/15	2/28/17	Scaffold	SC	SAMEA1930218	GCA_001357555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/555/GCA_001357555.1_10593_2_56	-	07-702
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11714	39.6	-	FEEF01	33	2322	2067	2/9/16	3/13/17	Scaffold	SC	SAMEA2238674	GCA_900027565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/565/GCA_900027565.1_11861_2_13	-	2842STDY5644047
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	5.09513	50.4	-	LOOY01	73	5245	4919	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334743	GCA_001576035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/035/GCA_001576035.1_ASM157603v1	-	G27
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	5.03524	50.7	-	LOPA01	139	5275	4896	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334745	GCA_001576075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/075/GCA_001576075.1_ASM157607v1	-	G299
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09062	39.6	-	FCRD01	33	2314	2058	2/6/16	3/13/17	Scaffold	SC	SAMEA2239057	GCA_900027575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/575/GCA_900027575.1_11860_7_16	-	2842STDY5644437
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.84981	52	-	CGOF01	53	5053	4673	4/21/15	2/28/17	Scaffold	SC	SAMEA1930222	GCA_001357595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/595/GCA_001357595.1_10592_2_78	-	Jul-20
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80848	32.8	-	FGXC01	75	2939	2755	2/10/16	3/5/17	Contig	SC	SAMEA1469585	GCA_900048385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/385/GCA_900048385.1_7480_8_75	-	st2477
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8855	32.7	-	FGXD01	132	3018	2853	2/10/16	3/6/17	Contig	SC	SAMEA1469577	GCA_900048395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/395/GCA_900048395.1_7480_8_77	-	st2484
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.90847	51.9	-	CGOU01	49	5117	4752	4/21/15	2/28/17	Scaffold	SC	SAMEA1930228	GCA_001357655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/655/GCA_001357655.1_10593_2_74	-	Sep-97
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09247	39.6	-	FCSM01	34	2293	2042	2/6/16	3/13/17	Scaffold	SC	SAMEA2239081	GCA_900027585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/585/GCA_900027585.1_11860_7_41	-	2842STDY5644462
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	5.10032	50.5	-	LOPE01	117	5268	4925	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334749	GCA_001576095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/095/GCA_001576095.1_ASM157609v1	-	G303
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.88929	50.6	-	LOPH01	63	5090	4805	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334752	GCA_001576105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/105/GCA_001576105.1_ASM157610v1	-	G314
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05762	39.6	-	FCUQ01	39	2222	2000	2/6/16	3/13/17	Scaffold	SC	SAMEA2238850	GCA_900027595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/595/GCA_900027595.1_12216_4_90	-	2842STDY5644225
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.76405	52.1	-	CEZE01	44	4923	4570	3/11/15	2/28/17	Scaffold	SC	SAMEA1930233	GCA_001357735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/735/GCA_001357735.1_10592_2_72	-	IPCG
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83886	32.7	-	FGXF01	58	2933	2783	2/10/16	3/5/17	Contig	SC	SAMEA1469573	GCA_900048405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/405/GCA_900048405.1_7480_8_78	-	st2491
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.803	32.7	-	FFYT01	67	2895	2748	2/10/16	3/5/17	Contig	SC	SAMEA1317509	GCA_900048445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/445/GCA_900048445.1_7414_7_61	-	st403
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9476	51.9	-	CGMW01	51	5150	4779	4/21/15	2/28/17	Scaffold	SC	SAMEA1930238	GCA_001357795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/795/GCA_001357795.1_10592_2_76	-	IPCO
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04002	39.7	-	FCWE01	38	2269	2043	2/6/16	3/13/17	Scaffold	SC	SAMEA2238909	GCA_900027605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/605/GCA_900027605.1_11861_3_57	-	2842STDY5644284
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.91425	50.6	-	LOPG01	64	5081	4778	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334751	GCA_001576135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/135/GCA_001576135.1_ASM157613v1	-	G313
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.84699	50.8	-	LOPM01	83	5076	4773	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334757	GCA_001576155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/155/GCA_001576155.1_ASM157615v1	-	G39
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05118	39.6	-	FCXW01	33	2257	2010	2/6/16	3/13/17	Scaffold	SC	SAMEA2382590	GCA_900027615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/615/GCA_900027615.1_12673_6_45	-	2842STDY5753130
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.95102	51.9	-	CIBM01	52	5175	4783	4/21/15	2/28/17	Scaffold	SC	SAMEA1930239	GCA_001357815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/815/GCA_001357815.1_10593_2_61	-	IPCP
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.90648	32.7	-	FGEG01	62	3060	2881	2/10/16	3/6/17	Contig	SC	SAMEA1317336	GCA_900048465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/465/GCA_900048465.1_7414_7_47	-	st345
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81339	32.7	-	FGEH01	66	2901	2763	2/10/16	3/6/17	Contig	SC	SAMEA1317310	GCA_900048475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/475/GCA_900048475.1_7414_7_50	-	st350
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81218	52.1	-	CGOG01	46	4990	4633	4/21/15	2/28/17	Scaffold	SC	SAMEA1930241	GCA_001357835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/835/GCA_001357835.1_10593_2_47	-	IPCR
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99329	39.7	-	FCXZ01	21	2199	1981	2/6/16	3/13/17	Scaffold	SC	SAMEA2382595	GCA_900027625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/625/GCA_900027625.1_12673_6_50	-	2842STDY5753135
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.81204	50.8	-	LOPJ01	95	5016	4687	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334754	GCA_001576175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/175/GCA_001576175.1_ASM157617v1	-	G323
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.58587	50.8	-	LOPB01	110	4704	4408	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334746	GCA_001576195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/195/GCA_001576195.1_ASM157619v1	-	G3
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01281	39.7	-	FCYE01	20	2247	2010	2/6/16	3/13/17	Scaffold	SC	SAMEA2238974	GCA_900027635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/635/GCA_900027635.1_11861_4_26	-	2842STDY5644350
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.78136	51.9	-	CHMA01	47	4968	4607	4/21/15	2/28/17	Scaffold	SC	SAMEA1930247	GCA_001357915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/915/GCA_001357915.1_10592_2_37	-	77-303
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80077	32.7	-	FGEI01	50	2893	2748	2/10/16	3/6/17	Contig	SC	SAMEA1317446	GCA_900048485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/485/GCA_900048485.1_7414_7_56	-	st390
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79852	32.7	-	FGER01	52	2894	2747	2/10/16	3/5/17	Contig	SC	SAMEA1317362	GCA_900048495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/495/GCA_900048495.1_7414_7_89	-	st479
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.90893	51.9	-	CGNF01	49	5125	4759	4/21/15	2/28/17	Scaffold	SC	SAMEA1930256	GCA_001357975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/975/GCA_001357975.1_10592_2_82	-	Sep-93
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01524	39.6	-	FDAB01	30	2208	1989	2/6/16	3/5/17	Scaffold	SC	SAMEA2382611	GCA_900027645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/645/GCA_900027645.1_12673_6_66	-	2842STDY5753151
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	5.51743	50.4	-	LOPD01	113	5778	5355	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334748	GCA_001576205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/205/GCA_001576205.1_ASM157620v1	-	G301
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.79807	50.7	-	LOPC01	70	4962	4678	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334747	GCA_001576235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/235/GCA_001576235.1_ASM157623v1	-	G300
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12266	39.7	-	FDEE01	46	2370	2121	2/6/16	3/12/17	Scaffold	SC	SAMEA2382720	GCA_900027655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/655/GCA_900027655.1_12673_7_80	-	2842STDY5753261
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71906	52.1	-	CGNP01	76	4895	4531	4/21/15	2/28/17	Scaffold	SC	SAMEA1930258	GCA_001357995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/357/995/GCA_001357995.1_10592_2_81	-	Sep-13
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.94506	32.7	-	FGEQ01	63	3099	2911	2/10/16	3/5/17	Contig	SC	SAMEA1317366	GCA_900048505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/505/GCA_900048505.1_7414_7_92	-	st494
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82693	32.7	-	FGEW01	54	2971	2847	2/10/16	3/5/17	Contig	SC	SAMEA1317413	GCA_900048515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/515/GCA_900048515.1_7414_8_19	-	st550
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7221	52.1	-	CGND01	43	4911	4543	4/21/15	2/28/17	Scaffold	SC	SAMEA1930259	GCA_001358015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/015/GCA_001358015.1_10592_2_53	-	Sep-14
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.17571	39.6	-	FDEV01	56	2437	2176	2/6/16	3/5/17	Scaffold	SC	SAMEA2382737	GCA_900027665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/665/GCA_900027665.1_12718_4_2	-	2842STDY5753279
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.69339	50.8	-	LONV01	152	4812	4474	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334714	GCA_001576295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/295/GCA_001576295.1_ASM157629v1	-	G186
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.85848	50.5	-	LOOF01	70	5039	4704	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334724	GCA_001576305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/305/GCA_001576305.1_ASM157630v1	-	G207
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05552	39.7	-	FDFV01	18	2266	2046	2/6/16	3/12/17	Scaffold	SC	SAMEA2382763	GCA_900027675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/675/GCA_900027675.1_12718_4_28	-	2842STDY5753305
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.90195	51.8	-	CVGR01	50	5104	4726	4/2/15	2/28/17	Scaffold	SC	SAMEA1930263	GCA_001358075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/075/GCA_001358075.1_10593_2_48	-	73-1102
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80515	32.7	-	FGEY01	40	2894	2755	2/10/16	3/5/17	Contig	SC	SAMEA1317334	GCA_900048525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/525/GCA_900048525.1_7414_8_30	-	st572
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8457	32.7	-	FGFN01	66	2950	2788	2/10/16	3/5/17	Contig	SC	SAMEA1464251	GCA_900048535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/535/GCA_900048535.1_7712_8_40	-	st732
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.76514	52.1	-	CGOC01	42	4932	4571	4/21/15	2/28/17	Scaffold	SC	SAMEA1930266	GCA_001358115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/115/GCA_001358115.1_10593_2_21	-	14-58
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07766	39.6	-	FDGA01	39	2276	2031	2/6/16	3/15/17	Scaffold	SC	SAMEA2382768	GCA_900027685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/685/GCA_900027685.1_12718_4_33	-	2842STDY5753310
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	5.07773	50.5	-	LONW01	98	5277	4950	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334715	GCA_001576315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/315/GCA_001576315.1_ASM157631v1	-	G187
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	5.63242	50.2	-	LOOZ01	353	5915	5435	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334744	GCA_001576325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/325/GCA_001576325.1_ASM157632v1	-	G28
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0873	39.6	-	FDHB01	35	2273	2046	2/6/16	3/13/17	Scaffold	SC	SAMEA2382795	GCA_900027695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/695/GCA_900027695.1_12718_4_60	-	2842STDY5753337
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71699	52.1	-	CGNY01	43	4908	4539	4/21/15	2/28/17	Scaffold	SC	SAMEA1930272	GCA_001358155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/155/GCA_001358155.1_10593_2_16	-	69-61
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84627	32.6	-	FGFO01	68	2946	2793	2/10/16	3/5/17	Contig	SC	SAMEA1464278	GCA_900048545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/545/GCA_900048545.1_7712_8_49	-	st764
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81109	32.7	-	FGFP01	74	2917	2757	2/10/16	3/6/17	Contig	SC	SAMEA1464285	GCA_900048555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/555/GCA_900048555.1_7712_8_52	-	st769
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93133	51.8	-	CVCF01	64	5132	4742	4/2/15	2/28/17	Scaffold	SC	SAMEA1963863	GCA_001358175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/175/GCA_001358175.1_10426_1_76	-	ty2-146
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05494	39.6	-	FDHV01	28	2260	2028	2/6/16	3/13/17	Scaffold	SC	SAMEA2382815	GCA_900027705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/705/GCA_900027705.1_12718_4_80	-	2842STDY5753357
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	5.30841	50.6	-	LOOX01	357	5561	5144	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334742	GCA_001576375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/375/GCA_001576375.1_ASM157637v1	-	G26
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.74588	50.7	-	LOPL01	53	4866	4594	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334756	GCA_001576385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/385/GCA_001576385.1_ASM157638v1	-	G35
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06595	39.6	-	FDMC01	33	2276	2032	2/6/16	3/13/17	Scaffold	SC	SAMEA2382935	GCA_900027715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/715/GCA_900027715.1_12754_1_10	-	2842STDY5753479
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73476	52	-	CEWU01	47	4897	4538	3/10/15	2/28/17	Scaffold	SC	SAMEA1964600	GCA_001358195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/195/GCA_001358195.1_10060_5_27	-	A236
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80504	32.7	-	FGFS01	41	2900	2744	2/10/16	3/5/17	Contig	SC	SAMEA1464388	GCA_900048565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/565/GCA_900048565.1_7712_8_56	-	st779
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83718	32.7	-	FGFR01	42	2938	2786	2/10/16	3/5/17	Contig	SC	SAMEA1464676	GCA_900048575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/575/GCA_900048575.1_7712_8_59	-	st792
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93063	51.8	-	CGPU01	52	5123	4736	4/21/15	2/28/17	Scaffold	SC	SAMEA1964641	GCA_001358215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/215/GCA_001358215.1_10607_1_59	-	2011-002088
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1273	39.5	-	FDPZ01	35	2338	2095	2/9/16	3/13/17	Scaffold	SC	SAMEA2383041	GCA_900027725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/725/GCA_900027725.1_12754_2_21	-	2842STDY5753586
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.81579	50.8	-	LOPP01	97	5013	4692	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334760	GCA_001576395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/395/GCA_001576395.1_ASM157639v1	-	G6
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.85508	50.8	-	LOPK01	118	5033	4699	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334755	GCA_001576435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/435/GCA_001576435.1_ASM157643v1	-	G324
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04414	39.6	-	FEGL01	27	2248	2019	2/9/16	3/13/17	Scaffold	SC	SAMEA2383067	GCA_900027735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/735/GCA_900027735.1_12754_2_47	-	2842STDY5753612
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.78377	52	-	CGKY01	46	4950	4573	4/21/15	2/28/17	Scaffold	SC	SAMEA1964768	GCA_001358255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/255/GCA_001358255.1_10060_6_82	-	129-0254-M
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86532	32.7	-	FGFQ01	74	2999	2840	2/10/16	3/5/17	Contig	SC	SAMEA1464688	GCA_900048585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/585/GCA_900048585.1_7712_8_65	-	st805
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83327	32.7	-	FGFT01	54	2931	2782	2/10/16	3/5/17	Contig	SC	SAMEA1464684	GCA_900048595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/595/GCA_900048595.1_7712_8_68	-	st812
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.02998	51.8	-	CVES01	77	5258	4868	4/2/15	2/28/17	Scaffold	SC	SAMEA1964917	GCA_001358275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/275/GCA_001358275.1_10540_1_63	-	ipt61
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12206	39.6	-	FEIZ01	54	2345	2103	2/9/16	3/13/17	Scaffold	SC	SAMEA2383133	GCA_900027745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/745/GCA_900027745.1_12754_3_18	-	2842STDY5753679
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	5.4673	50.4	-	LOPO01	182	5769	5352	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334759	GCA_001576455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/455/GCA_001576455.1_ASM157645v1	-	G51
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.98939	50.5	-	LOPI01	109	5173	4827	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334753	GCA_001576465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/465/GCA_001576465.1_ASM157646v1	-	G315
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05079	39.6	-	FEJI01	27	2268	2015	2/9/16	3/5/17	Scaffold	SC	SAMEA2383142	GCA_900027755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/755/GCA_900027755.1_12754_3_27	-	2842STDY5753688
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73717	52	-	CGMB01	42	4903	4548	4/21/15	2/28/17	Scaffold	SC	SAMEA1965743	GCA_001358295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/295/GCA_001358295.1_10541_2_1	-	MDUST107
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.74821	32.7	-	FGFV01	36	2814	2667	2/10/16	3/5/17	Contig	SC	SAMEA1464691	GCA_900048605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/605/GCA_900048605.1_7712_8_77	-	st832
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78559	32.7	-	FGFW01	51	2878	2727	2/10/16	3/5/17	Contig	SC	SAMEA1464448	GCA_900048615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/615/GCA_900048615.1_7712_8_85	-	st849
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.721	52	-	CHLR01	60	4877	4517	4/21/15	2/28/17	Scaffold	SC	SAMEA1965799	GCA_001358315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/315/GCA_001358315.1_10562_2_74	-	MDUST392
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05951	39.5	-	FEKB01	38	2282	2035	2/9/16	3/13/17	Scaffold	SC	SAMEA2383161	GCA_900027765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/765/GCA_900027765.1_12754_3_46	-	2842STDY5753707
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.8206	50.5	-	LOPN01	73	4986	4675	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334758	GCA_001576495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/495/GCA_001576495.1_ASM157649v1	-	G43
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	4.59953	50.8	-	LOPQ01	79	4704	4402	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334761	GCA_001576505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/505/GCA_001576505.1_ASM157650v1	-	G65
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08813	39.6	-	FEKJ01	27	2288	2056	2/9/16	3/13/17	Scaffold	SC	SAMEA2383169	GCA_900027775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/775/GCA_900027775.1_12754_3_54	-	2842STDY5753715
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72187	52	-	CGMK01	55	4883	4516	4/21/15	2/28/17	Scaffold	SC	SAMEA1966611	GCA_001358355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/355/GCA_001358355.1_10561_2_26	-	np49
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86525	32.6	-	FGGC01	68	2966	2796	2/10/16	3/5/17	Contig	SC	SAMEA1317576	GCA_900048625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/625/GCA_900048625.1_7414_8_49	-	st873
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81502	32.7	-	FGGJ01	65	2914	2761	2/10/16	3/6/17	Contig	SC	SAMEA1317540	GCA_900048635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/635/GCA_900048635.1_7414_8_59	-	st894
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.03101	51.8	-	CVAM01	68	5262	4861	4/2/15	2/28/17	Scaffold	SC	SAMEA1967506	GCA_001358395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/395/GCA_001358395.1_10426_1_16	-	dtc150
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06758	39.6	-	FEKI01	38	2264	2034	2/9/16	3/13/17	Scaffold	SC	SAMEA2383168	GCA_900027785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/785/GCA_900027785.1_12754_3_53	-	2842STDY5753714
Escherichia coli	562	PRJNA305846	305846	Proteobacteria	Gammaproteobacteria	5.13654	50.7	-	LOPR01	143	5342	4960	2/26/16	2/25/17	Scaffold	KOlimastIR	SAMN04334762	GCA_001576545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/576/545/GCA_001576545.1_ASM157654v1	-	G76
Escherichia coli O119:H6	397448	PRJDB3456	314388	Proteobacteria	Gammaproteobacteria	5.28495	50.5	-	BBUS01	1159	5498	5093	3/4/16	2/25/17	Scaffold	University of Miyazaki	SAMD00026254	GCA_001592505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/505/GCA_001592505.1_ASM159250v1	27083266	3481-1/85
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0534	39.6	-	FEMF01	28	2271	2025	2/9/16	3/13/17	Scaffold	SC	SAMEA2383217	GCA_900027795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/795/GCA_900027795.1_12754_4_7	-	2842STDY5753764
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.83387	52	-	CGKG01	45	5026	4651	4/21/15	2/28/17	Scaffold	SC	SAMEA1967753	GCA_001358415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/415/GCA_001358415.1_10060_6_78	-	129-0339-M
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84293	32.7	-	FGGL01	60	2955	2797	2/10/16	3/5/17	Contig	SC	SAMEA1317580	GCA_900048645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/645/GCA_900048645.1_7414_8_62	-	st903
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78015	32.7	-	FGGO01	48	2866	2717	2/10/16	3/5/17	Contig	SC	SAMEA1317482	GCA_900048665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/665/GCA_900048665.1_7414_8_65	-	st908
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74409	52.1	-	CGQL01	48	4904	4538	4/21/15	2/28/17	Scaffold	SC	SAMEA1967917	GCA_001358455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/455/GCA_001358455.1_10607_2_6	-	1003108
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06705	39.5	-	FENT01	23	2260	2027	2/9/16	3/13/17	Scaffold	SC	SAMEA2383259	GCA_900027805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/805/GCA_900027805.1_12754_4_49	-	2842STDY5753806
Escherichia coli O119:H6	397448	PRJDB3456	314388	Proteobacteria	Gammaproteobacteria	5.3774	50.5	-	BBUT01	1738	5512	5101	3/4/16	2/25/17	Scaffold	University of Miyazaki	SAMD00026255	GCA_001592525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/525/GCA_001592525.1_ASM159252v1	27083266	4522-1/89
Escherichia coli O119:H6	397448	PRJDB3456	314388	Proteobacteria	Gammaproteobacteria	5.31835	50.5	-	BBUU01	1229	5528	5085	3/4/16	2/25/17	Scaffold	University of Miyazaki	SAMD00026256	GCA_001592545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/545/GCA_001592545.1_ASM159254v1	27083266	EC175/02
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98779	39.7	-	FEOE01	30	2213	1978	2/9/16	3/15/17	Scaffold	SC	SAMEA2674596	GCA_900027815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/027/815/GCA_900027815.1_14355_8_69	-	2842STDY5881856
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82425	52	-	CEXZ01	42	5004	4648	3/13/15	2/28/17	Scaffold	SC	SAMEA1968014	GCA_001358475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/475/GCA_001358475.1_10349_1_1	-	ERL021174
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81181	32.7	-	FGGP01	86	2914	2770	2/10/16	3/6/17	Contig	SC	SAMEA1317406	GCA_900048675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/675/GCA_900048675.1_7414_8_69	-	st921
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82612	32.7	-	FGGV01	73	2927	2772	2/10/16	3/5/17	Contig	SC	SAMEA1317351	GCA_900048695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/695/GCA_900048695.1_7414_8_72	-	st927
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.68516	52.1	-	CEZK01	47	4825	4476	3/11/15	2/28/17	Scaffold	SC	SAMEA1968445	GCA_001358515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/515/GCA_001358515.1_10071_3_82	-	A122
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12953	39.6	-	FDVL01	29	2358	2122	2/9/16	3/13/17	Scaffold	SC	SAMEA2238280	GCA_900028155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/155/GCA_900028155.1_11860_4_4	-	2842STDY5643649
Escherichia coli	562	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	4.85821	50.7	-	LOJM01	93	5107	4750	3/29/16	2/25/17	Scaffold	Miami University	SAMN03076174	GCA_001601605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/605/GCA_001601605.1_ASM160160v1	-	105547
Escherichia coli	562	PRJNA261239	261239	Proteobacteria	Gammaproteobacteria	5.33525	50.7	-	LOJL01	101	5634	5283	3/29/16	2/25/17	Scaffold	Miami University	SAMN03076173	GCA_001601655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/601/655/GCA_001601655.1_ASM160165v1	-	105454
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.19278	39.6	-	FDWF01	42	2427	2186	2/9/16	3/13/17	Scaffold	SC	SAMEA2238313	GCA_900028165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/165/GCA_900028165.1_11860_4_39	-	2842STDY5643682
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.85196	52	-	CGKX01	46	5059	4686	4/21/15	2/28/17	Scaffold	SC	SAMEA1968833	GCA_001358535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/535/GCA_001358535.1_10060_6_86	-	H094620494
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86214	32.7	-	FGGS01	74	3004	2829	2/10/16	3/6/17	Contig	SC	SAMEA1317309	GCA_900048705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/705/GCA_900048705.1_7414_8_75	-	st932
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83559	32.7	-	FGGT01	58	2961	2778	2/10/16	3/5/17	Contig	SC	SAMEA1317322	GCA_900048715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/715/GCA_900048715.1_7414_8_74	-	st931
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7463	52.1	-	CGSZ01	51	4918	4545	4/21/15	2/28/17	Scaffold	SC	SAMEA1969183	GCA_001358555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/555/GCA_001358555.1_10071_3_58	-	583236
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06682	39.7	-	FECP01	17	2280	2047	2/9/16	3/13/17	Scaffold	SC	SAMEA2238594	GCA_900028175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/175/GCA_900028175.1_11861_1_32	-	2842STDY5643966
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.25114	50.5	-	LOFN01	170	5545	5064	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002627	GCA_001606355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/355/GCA_001606355.1_ASM160635v1	-	STEC 731
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.52693	50.4	-	LOFM01	235	6015	5509	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002626	GCA_001606365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/365/GCA_001606365.1_ASM160636v1	-	STEC 709
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98025	39.7	-	FEFO01	18	2173	1955	2/9/16	3/13/17	Scaffold	SC	SAMEA2238745	GCA_900028185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/185/GCA_900028185.1_11861_2_84	-	2842STDY5644118
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74228	52.1	-	CFAW01	53	4911	4549	3/12/15	2/28/17	Scaffold	SC	SAMEA1969886	GCA_001358575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/575/GCA_001358575.1_10607_2_1	-	1035759
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79072	32.7	-	FGGX01	104	2858	2717	2/10/16	3/5/17	Contig	SC	SAMEA1317395	GCA_900048725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/725/GCA_900048725.1_7414_8_78	-	st937
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.7984	32.7	-	FGHB01	66	2889	2744	2/10/16	3/5/17	Contig	SC	SAMEA1317550	GCA_900048745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/745/GCA_900048745.1_7414_8_86	-	st960
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74164	52.1	-	CGQG01	48	4905	4546	4/21/15	2/28/17	Scaffold	SC	SAMEA1970227	GCA_001358595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/595/GCA_001358595.1_10607_2_19	-	BHA2HH
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05771	39.5	-	FCRP01	25	2254	2031	2/6/16	3/5/17	Scaffold	SC	SAMEA2239066	GCA_900028195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/195/GCA_900028195.1_11860_7_25	-	2842STDY5644446
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.69174	50.2	-	LOFK01	261	6247	5744	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002624	GCA_001606375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/375/GCA_001606375.1_ASM160637v1	-	STEC 691
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.40097	50.6	-	LOGW01	188	5887	5466	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002667	GCA_001606385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/385/GCA_001606385.1_ASM160638v1	-	STEC 2193
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99631	39.8	-	FCTX01	53	2201	1944	2/6/16	3/13/17	Scaffold	SC	SAMEA2238818	GCA_900028205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/205/GCA_900028205.1_11893_1_60	-	2842STDY5644192
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81727	51.9	-	CVCO01	45	5011	4641	4/2/15	2/28/17	Scaffold	SC	SAMEA1970434	GCA_001358615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/615/GCA_001358615.1_10426_1_9	-	dtc139
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79779	32.7	-	FHFG01	60	2925	2749	2/10/16	3/6/17	Contig	SC	SAMEA1469703	GCA_900048755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/755/GCA_900048755.1_7480_7_49	-	st1246
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85174	32.8	-	FHFH01	100	3014	2829	2/10/16	3/5/17	Contig	SC	SAMEA1469702	GCA_900048765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/765/GCA_900048765.1_7480_7_76	-	st1308
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.94725	51.8	-	CGQD01	54	5158	4779	4/21/15	2/28/17	Scaffold	SC	SAMEA1970592	GCA_001358635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/635/GCA_001358635.1_10607_2_53	-	2010-013700
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12821	39.6	-	FCUA01	45	2374	2117	2/6/16	3/15/17	Scaffold	SC	SAMEA2238823	GCA_900028215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/215/GCA_900028215.1_11893_1_65	-	2842STDY5644197
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.36996	50.5	-	LOGK01	170	5715	5248	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002650	GCA_001606445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/445/GCA_001606445.1_ASM160644v1	-	STEC 1442
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.00091	50.7	-	LOGJ01	62	5217	4892	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002649	GCA_001606465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/465/GCA_001606465.1_ASM160646v1	-	STEC 1375
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99251	39.8	-	FCVU01	43	2195	1935	2/6/16	3/13/17	Scaffold	SC	SAMEA2238895	GCA_900028225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/225/GCA_900028225.1_11861_3_42	-	2842STDY5644270
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.87713	51.9	-	CEYD01	53	5086	4699	3/11/15	2/28/17	Scaffold	SC	SAMEA1970803	GCA_001358655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/655/GCA_001358655.1_10426_1_3	-	3525/3
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87027	32.7	-	FHFI01	47	2976	2825	2/10/16	3/9/17	Contig	SC	SAMEA1464380	GCA_900048775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/775/GCA_900048775.1_7521_5_79	-	st1444
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83473	32.7	-	FHFJ01	75	2942	2787	2/10/16	3/6/17	Contig	SC	SAMEA1464424	GCA_900048785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/785/GCA_900048785.1_7521_6_11	-	st1495
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72046	52	-	CIGU01	55	4886	4526	4/21/15	2/28/17	Scaffold	SC	SAMEA1971194	GCA_001358675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/675/GCA_001358675.1_10493_1_56	-	MDUST286
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.9681	39.8	-	FCVX01	20	2188	1938	2/6/16	3/12/17	Scaffold	SC	SAMEA2238902	GCA_900028235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/235/GCA_900028235.1_11861_3_50	-	2842STDY5644277
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.03841	50.7	-	LOGM01	84	5264	4957	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002652	GCA_001606475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/475/GCA_001606475.1_ASM160647v1	-	STEC 1473
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.44572	50.5	-	LOGL01	184	5762	5340	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002651	GCA_001606515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/515/GCA_001606515.1_ASM160651v1	-	STEC 1465
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0036	39.7	-	FCYL01	36	2212	1995	2/6/16	3/13/17	Scaffold	SC	SAMEA2238982	GCA_900028245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/245/GCA_900028245.1_11861_4_35	-	2842STDY5644358
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72007	52	-	CHLN01	41	4871	4515	4/21/15	2/28/17	Scaffold	SC	SAMEA1971821	GCA_001358695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/695/GCA_001358695.1_10071_8_4	-	Gen-0004
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.91843	32.6	-	FHDX01	72	3047	2889	2/10/16	3/6/17	Contig	SC	SAMEA1469538	GCA_900049315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/315/GCA_900049315.1_7480_8_91	-	st2548
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78445	32.7	-	FHDW01	51	2876	2728	2/10/16	3/5/17	Contig	SC	SAMEA1469552	GCA_900049325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/325/GCA_900049325.1_7480_8_94	-	st2570
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71813	52	-	CGQF01	41	4874	4521	4/21/15	2/28/17	Scaffold	SC	SAMEA1971985	GCA_001358715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/715/GCA_001358715.1_10607_2_40	-	A58390
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0763	39.7	-	FCZA01	36	2293	2055	2/6/16	3/13/17	Scaffold	SC	SAMEA2674610	GCA_900028265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/265/GCA_900028265.1_14355_8_83	-	2842STDY5881870
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.64343	50.6	-	LOGT01	201	6020	5569	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002660	GCA_001606525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/525/GCA_001606525.1_ASM160652v1	-	STEC 1686
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.33519	50.4	-	LOGC01	230	5877	5269	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002642	GCA_001606595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/595/GCA_001606595.1_ASM160659v1	-	STEC 1255
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11407	39.6	-	FDAD01	50	2320	2092	2/6/16	3/5/17	Scaffold	SC	SAMEA2382614	GCA_900028275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/275/GCA_900028275.1_12673_6_69	-	2842STDY5753154
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93222	51.8	-	CVBR01	66	5124	4745	4/2/15	2/28/17	Scaffold	SC	SAMEA1972816	GCA_001358775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/775/GCA_001358775.1_10426_1_57	-	ct1-65
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83254	32.7	-	FHBL01	75	2928	2782	2/10/16	3/5/17	Contig	SC	SAMEA1469564	GCA_900049385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/385/GCA_900049385.1_7480_7_31	-	st1188
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78752	32.8	-	FHBR01	62	2931	2741	2/10/16	3/5/17	Contig	SC	SAMEA1464325	GCA_900049395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/395/GCA_900049395.1_7748_6_16	-	st1390
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72485	52	-	CHLZ01	79	4894	4520	4/21/15	2/28/17	Scaffold	SC	SAMEA1972841	GCA_001358795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/795/GCA_001358795.1_10562_2_58	-	MDUST367
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11329	39.5	-	FDBJ01	56	2298	2030	2/6/16	3/12/17	Scaffold	SC	SAMEA2382646	GCA_900028285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/285/GCA_900028285.1_12673_7_6	-	2842STDY5753187
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.30836	50.5	-	LOGN01	120	5571	5208	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002653	GCA_001606615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/615/GCA_001606615.1_ASM160661v1	-	STEC 1500
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.32443	50.6	-	LPWV01	161	5679	5237	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002654	GCA_001606625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/625/GCA_001606625.1_ASM160662v1	-	STEC 1506
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05691	39.5	-	FDBK01	24	2271	2029	2/6/16	3/13/17	Scaffold	SC	SAMEA2382647	GCA_900028295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/295/GCA_900028295.1_12673_7_7	-	2842STDY5753188
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.02811	51.8	-	CVBY01	71	5251	4867	4/2/15	2/28/17	Scaffold	SC	SAMEA1973660	GCA_001358815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/815/GCA_001358815.1_10426_1_64	-	ty3-215
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80233	32.7	-	FHDG01	63	2891	2748	2/10/16	3/6/17	Contig	SC	SAMEA1469706	GCA_900049405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/405/GCA_900049405.1_7480_8_25	-	st2254
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79714	32.7	-	FHDH01	58	2888	2744	2/10/16	3/5/17	Contig	SC	SAMEA1469711	GCA_900049415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/415/GCA_900049415.1_7480_8_31	-	st2282
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69941	52.1	-	CGJS01	42	4856	4501	4/21/15	2/28/17	Scaffold	SC	SAMEA2055248	GCA_001358835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/835/GCA_001358835.1_10060_6_14	-	SV431
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0614	39.6	-	FDBW01	35	2281	2044	2/6/16	3/13/17	Scaffold	SC	SAMEA2382659	GCA_900028305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/305/GCA_900028305.1_12673_7_19	-	2842STDY5753200
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.17508	50.6	-	LOFL01	155	5566	5186	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002625	GCA_001606695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/695/GCA_001606695.1_ASM160669v1	-	STEC 707
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	4.97121	50.6	-	LOFQ01	105	5259	4893	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002630	GCA_001606705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/705/GCA_001606705.1_ASM160670v1	-	STEC 793
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00856	39.8	-	FDEP01	31	2240	2010	2/6/16	3/13/17	Scaffold	SC	SAMEA2382731	GCA_900028315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/315/GCA_900028315.1_12673_7_91	-	2842STDY5753272
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69867	52.1	-	CGJV01	41	4850	4504	4/21/15	2/28/17	Scaffold	SC	SAMEA2055255	GCA_001358915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/915/GCA_001358915.1_10060_6_35	-	UI17614
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78528	32.7	-	FHDV01	59	2878	2726	2/10/16	3/5/17	Contig	SC	SAMEA1469544	GCA_900049425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/425/GCA_900049425.1_7480_8_85	-	st2527
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77111	32.8	-	FHEU01	35	2860	2718	2/10/16	3/5/17	Contig	SC	SAMEA1464193	GCA_900049435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/435/GCA_900049435.1_7564_8_69	-	st3116
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72244	52	-	CGTB01	45	4875	4505	4/21/15	2/28/17	Scaffold	SC	SAMEA2055260	GCA_001358935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/935/GCA_001358935.1_10060_6_50	-	UI4639
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04355	39.6	-	FDFE01	56	2221	1971	2/6/16	3/13/17	Scaffold	SC	SAMEA2382746	GCA_900028325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/325/GCA_900028325.1_12718_4_11	-	2842STDY5753288
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.35224	50.6	-	LOCW01	203	5785	5381	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002612	GCA_001606725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/725/GCA_001606725.1_ASM160672v1	-	STEC 384
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.60691	50.4	-	LOCS01	197	6140	5648	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002608	GCA_001606755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/755/GCA_001606755.1_ASM160675v1	-	STEC 309
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99431	39.8	-	FDFS01	44	2186	1931	2/6/16	3/13/17	Scaffold	SC	SAMEA2382760	GCA_900028335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/335/GCA_900028335.1_12718_4_25	-	2842STDY5753302
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74448	52.1	-	CGKU01	48	4906	4536	4/21/15	2/28/17	Scaffold	SC	SAMEA2055440	GCA_001358975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/358/975/GCA_001358975.1_10060_6_71	-	129-0242-M
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85285	32.7	-	FHEX01	55	2979	2814	2/10/16	3/5/17	Contig	SC	SAMEA1464313	GCA_900049445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/445/GCA_900049445.1_7564_8_81	-	st3218
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87665	32.7	-	FHEY01	55	2995	2835	2/10/16	3/6/17	Contig	SC	SAMEA1464308	GCA_900049455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/455/GCA_900049455.1_7564_8_78	-	st3199
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.85152	52	-	CGLC01	51	5048	4679	4/21/15	2/28/17	Scaffold	SC	SAMEA2055445	GCA_001359035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/035/GCA_001359035.1_10060_6_89	-	H075080543
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11864	39.5	-	FDGW01	51	2327	2082	2/6/16	3/13/17	Scaffold	SC	SAMEA2382790	GCA_900028345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/345/GCA_900028345.1_12718_4_55	-	2842STDY5753332
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.52047	50.6	-	LOGG01	141	5849	5457	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002646	GCA_001606785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/785/GCA_001606785.1_ASM160678v1	-	STEC 1299
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.49799	50.4	-	LOGF01	252	6012	5494	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002645	GCA_001606815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/815/GCA_001606815.1_ASM160681v1	-	STEC 1293
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06938	39.6	-	FDGZ01	43	2246	2010	2/6/16	3/13/17	Scaffold	SC	SAMEA2382793	GCA_900028355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/355/GCA_900028355.1_12718_4_58	-	2842STDY5753335
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.94269	51.8	-	CIKE01	79	5135	4757	4/21/15	2/28/17	Scaffold	SC	SAMEA2055641	GCA_001359095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/095/GCA_001359095.1_9870_8_27	-	2010-006866
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.89371	32.7	-	FHFE01	54	3036	2846	2/10/16	3/5/17	Contig	SC	SAMEA1464634	GCA_900049465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/465/GCA_900049465.1_7521_5_17	-	st1011
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.91042	32.7	-	FGYI01	61	3029	2859	2/10/16	3/5/17	Contig	SC	SAMEA1464683	GCA_900049765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/765/GCA_900049765.1_7748_6_64	-	st2731
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93438	51.8	-	CFAK01	55	5131	4751	3/10/15	2/28/17	Scaffold	SC	SAMEA2055647	GCA_001359135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/135/GCA_001359135.1_9870_8_45	-	2006-007642
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06651	39.7	-	FDHD01	58	2275	2021	2/6/16	3/15/17	Scaffold	SC	SAMEA2382797	GCA_900028365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/365/GCA_900028365.1_12718_4_62	-	2842STDY5753339
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.08821	50.5	-	LOGH01	63	5336	5017	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002647	GCA_001606835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/835/GCA_001606835.1_ASM160683v1	-	STEC 1303
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.01006	50.7	-	LOFW01	75	5220	4922	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002636	GCA_001606855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/855/GCA_001606855.1_ASM160685v1	-	STEC 1178
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99427	39.7	-	FDKD01	19	2188	1972	2/6/16	3/13/17	Scaffold	SC	SAMEA2382882	GCA_900028375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/375/GCA_900028375.1_12718_5_52	-	2842STDY5753425
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93415	51.8	-	CFAI01	72	5131	4752	3/10/15	2/28/17	Scaffold	SC	SAMEA2055774	GCA_001359155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/155/GCA_001359155.1_9870_8_69	-	BC2011-1683
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85984	32.7	-	FGZK01	86	2987	2827	2/10/16	3/5/17	Contig	SC	SAMEA1464578	GCA_900049775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/775/GCA_900049775.1_7564_8_40	-	st2923
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.88021	32.7	-	FHBG01	62	3003	2848	2/10/16	3/5/17	Contig	SC	SAMEA1464514	GCA_900049785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/785/GCA_900049785.1_7521_5_8	-	st996
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93218	51.8	-	CGIV01	62	5129	4744	4/21/15	2/28/17	Scaffold	SC	SAMEA2055783	GCA_001359175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/175/GCA_001359175.1_10060_5_2	-	2008-003680
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07145	39.6	-	FDLF01	51	2285	2036	2/6/16	3/13/17	Scaffold	SC	SAMEA2382910	GCA_900028385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/385/GCA_900028385.1_12718_5_80	-	2842STDY5753453
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.22723	50.8	-	LOFR01	129	5589	5200	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002631	GCA_001606895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/895/GCA_001606895.1_ASM160689v1	-	STEC 886
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.1353	50.7	-	LOIE01	132	5448	5081	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002678	GCA_001606915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/915/GCA_001606915.1_ASM160691v1	-	STEC 2499
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12006	39.6	-	FDMD01	44	2352	2112	2/6/16	3/12/17	Scaffold	SC	SAMEA2382936	GCA_900028395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/395/GCA_900028395.1_12754_1_11	-	2842STDY5753480
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73266	52	-	CGJI01	59	4892	4530	4/21/15	2/28/17	Scaffold	SC	SAMEA2055899	GCA_001359235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/235/GCA_001359235.1_10060_5_44	-	A255
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83733	32.7	-	FHBP01	78	2944	2786	2/10/16	3/5/17	Contig	SC	SAMEA1469574	GCA_900049795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/795/GCA_900049795.1_7480_7_58	-	st1271
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8296	32.7	-	FHDJ01	68	2930	2786	2/10/16	3/5/17	Contig	SC	SAMEA1469712	GCA_900049805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/805/GCA_900049805.1_7480_8_34	-	st2296
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.80397	52	-	CGIY01	56	4976	4615	4/21/15	2/28/17	Scaffold	SC	SAMEA2055901	GCA_001359275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/275/GCA_001359275.1_10060_5_50	-	A262
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98139	39.7	-	FDMR01	20	2174	1955	2/6/16	3/6/17	Scaffold	SC	SAMEA2382951	GCA_900028405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/405/GCA_900028405.1_12754_1_26	-	2842STDY5753495
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.48592	50.6	-	LPWW01	280	5963	5441	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002663	GCA_001606935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/935/GCA_001606935.1_ASM160693v1	-	STEC 2110.1
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.40042	50.4	-	LOJE01	244	5937	5471	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002664	GCA_001606975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/975/GCA_001606975.1_ASM160697v1	-	STEC 2110.3
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01508	39.8	-	FDMQ01	24	2249	2005	2/6/16	3/15/17	Scaffold	SC	SAMEA2382950	GCA_900028415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/415/GCA_900028415.1_12754_1_25	-	2842STDY5753494
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71969	52	-	CHLI01	44	4876	4523	4/21/15	2/28/17	Scaffold	SC	SAMEA2055904	GCA_001359295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/295/GCA_001359295.1_10060_5_59	-	103643
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81108	32.7	-	FHEZ01	64	2930	2756	2/10/16	3/6/17	Contig	SC	SAMEA1464298	GCA_900049815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/815/GCA_900049815.1_7564_8_90	-	st3279
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82741	32.7	-	FHBN01	69	2938	2777	2/10/16	3/5/17	Contig	SC	SAMEA1469567	GCA_900050265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/265/GCA_900050265.1_7480_7_40	-	st1213
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70719	52.1	-	CGJG01	96	4882	4496	4/21/15	2/28/17	Scaffold	SC	SAMEA2055907	GCA_001359335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/335/GCA_001359335.1_10060_5_68	-	B1305
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01504	39.8	-	FDNJ01	18	2249	2007	2/6/16	3/13/17	Scaffold	SC	SAMEA2382969	GCA_900028425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/425/GCA_900028425.1_12754_1_44	-	2842STDY5753513
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.4668	50.3	-	LOGU01	244	6024	5541	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002665	GCA_001606985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/606/985/GCA_001606985.1_ASM160698v1	-	STEC 2144
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.62545	50.4	-	LOCY01	254	6188	5706	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002614	GCA_001607015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/015/GCA_001607015.1_ASM160701v1	-	STEC 477
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08736	39.5	-	FDNO01	63	2323	2026	2/6/16	3/12/17	Scaffold	SC	SAMEA2382974	GCA_900028435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/435/GCA_900028435.1_12754_1_49	-	2842STDY5753518
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71978	52	-	CGJD01	45	4865	4508	4/21/15	2/28/17	Scaffold	SC	SAMEA2056046	GCA_001359395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/395/GCA_001359395.1_10060_5_86	-	W794
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80223	32.7	-	FHCE01	51	2881	2735	2/10/16	3/5/17	Contig	SC	SAMEA1464612	GCA_900050275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/275/GCA_900050275.1_7521_6_84	-	st1712
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80459	32.7	-	FHCM01	38	2898	2753	2/10/16	3/5/17	Contig	SC	SAMEA1317424	GCA_900050285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/285/GCA_900050285.1_7469_7_34	-	st1898
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73925	52.1	-	CIBG01	47	4909	4555	4/21/15	2/28/17	Scaffold	SC	SAMEA2056049	GCA_001359435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/435/GCA_001359435.1_10071_3_6	-	TY029
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01528	39.7	-	FDNR01	24	2230	2005	2/6/16	3/13/17	Scaffold	SC	SAMEA2382978	GCA_900028445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/445/GCA_900028445.1_12754_1_53	-	2842STDY5753522
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.65605	50.3	-	LOCZ01	301	6263	5735	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002615	GCA_001607025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/025/GCA_001607025.1_ASM160702v1	-	STEC 479
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.68916	50.4	-	LOFS01	216	6244	5794	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002632	GCA_001607075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/075/GCA_001607075.1_ASM160707v1	-	STEC 931
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04311	39.6	-	FDNS01	46	2266	2003	2/6/16	3/13/17	Scaffold	SC	SAMEA2382979	GCA_900028455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/455/GCA_900028455.1_12754_1_54	-	2842STDY5753523
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73871	52.1	-	CGLA01	43	4903	4555	4/21/15	2/28/17	Scaffold	SC	SAMEA2056051	GCA_001359455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/455/GCA_001359455.1_10071_3_15	-	TY138
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85277	32.7	-	FGYP01	43	2975	2821	2/10/16	3/6/17	Contig	SC	SAMEA1464334	GCA_900050575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/575/GCA_900050575.1_7748_6_73	-	st2785
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.7917	32.7	-	FHAB01	41	2860	2701	2/10/16	3/5/17	Contig	SC	SAMEA1464485	GCA_900050595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/595/GCA_900050595.1_7564_8_65	-	st3095
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69785	52.1	-	CGTC01	43	4855	4504	4/21/15	2/28/17	Scaffold	SC	SAMEA2056056	GCA_001359475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/475/GCA_001359475.1_10071_3_30	-	237091
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08465	39.5	-	FDNV01	74	2317	2027	2/6/16	3/13/17	Scaffold	SC	SAMEA2382983	GCA_900028465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/465/GCA_900028465.1_12754_1_58	-	2842STDY5753527
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.55202	50.5	-	LOFU01	247	6134	5636	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002634	GCA_001607095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/095/GCA_001607095.1_ASM160709v1	-	STEC 1117
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.38542	50.2	-	LPWX01	215	5905	5417	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002670	GCA_001607105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/105/GCA_001607105.1_ASM160710v1	-	STEC 2270
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98189	39.8	-	FDNZ01	50	2191	1919	2/6/16	3/13/17	Scaffold	SC	SAMEA2382987	GCA_900028475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/475/GCA_900028475.1_12754_1_62	-	2842STDY5753531
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73889	52.1	-	CGLI01	40	4910	4557	4/21/15	2/28/17	Scaffold	SC	SAMEA2056204	GCA_001359515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/515/GCA_001359515.1_10071_3_63	-	363192
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86141	32.7	-	FHAG01	53	3005	2825	2/10/16	3/5/17	Contig	SC	SAMEA1464190	GCA_900050605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/605/GCA_900050605.1_7564_8_73	-	st3142
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79728	32.7	-	FHAJ01	55	2890	2742	2/10/16	3/5/17	Contig	SC	SAMEA1464420	GCA_900050615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/615/GCA_900050615.1_7564_8_76	-	st3180
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73276	52	-	CHMZ01	58	4893	4533	4/21/15	2/28/17	Scaffold	SC	SAMEA2056358	GCA_001359535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/535/GCA_001359535.1_9953_5_18	-	A285
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98965	39.8	-	FDOD01	47	2182	1936	2/6/16	3/13/17	Scaffold	SC	SAMEA2382991	GCA_900028485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/485/GCA_900028485.1_12754_1_66	-	2842STDY5753535
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.59791	50.5	-	LOGI01	173	5939	5519	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002648	GCA_001607155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/155/GCA_001607155.1_ASM160715v1	-	STEC 1363
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.1883	50.4	-	LOGA01	206	5590	5147	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002640	GCA_001607185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/185/GCA_001607185.1_ASM160718v1	-	STEC 1225
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08247	39.6	-	FDOL01	24	2282	2051	2/6/16	3/13/17	Scaffold	SC	SAMEA2383000	GCA_900028495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/495/GCA_900028495.1_12754_1_75	-	2842STDY5753544
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93666	51.8	-	CGVK01	78	5150	4752	4/21/15	2/28/17	Scaffold	SC	SAMEA2056501	GCA_001359575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/575/GCA_001359575.1_9870_8_23	-	2010-005872
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81219	32.7	-	FHAI01	32	2892	2749	2/10/16	3/5/17	Contig	SC	SAMEA1464409	GCA_900050625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/625/GCA_900050625.1_7564_8_77	-	st3193
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80111	32.7	-	FHDC01	57	2898	2746	2/10/16	3/5/17	Contig	SC	SAMEA1469607	GCA_900050635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/635/GCA_900050635.1_7480_8_4	-	st2194
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74276	52.1	-	CEYR01	47	4921	4560	3/12/15	2/28/17	Scaffold	SC	SAMEA2056541	GCA_001359635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/635/GCA_001359635.1_9953_5_93	-	LNT722
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09674	39.5	-	FDOR01	48	2300	2049	2/6/16	3/13/17	Scaffold	SC	SAMEA2383006	GCA_900028505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/505/GCA_900028505.1_12754_1_81	-	2842STDY5753550
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.47117	50.4	-	LOGB01	278	6039	5552	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002641	GCA_001607205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/205/GCA_001607205.1_ASM160720v1	-	STEC 1236
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	4.93042	50.6	-	LOGZ01	156	5254	4827	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002671	GCA_001607225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/225/GCA_001607225.1_ASM160722v1	-	STEC 2334
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06791	39.6	-	FDPC01	37	2291	2054	2/9/16	3/6/17	Scaffold	SC	SAMEA2383018	GCA_900028515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/515/GCA_900028515.1_12754_1_93	-	2842STDY5753562
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69663	52.1	-	CEYP01	44	4847	4491	3/10/15	2/28/17	Scaffold	SC	SAMEA2056542	GCA_001359655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/655/GCA_001359655.1_10060_6_3	-	LNT899
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.88395	32.6	-	FHDK01	80	2997	2843	2/10/16	3/5/17	Contig	SC	SAMEA1469697	GCA_900050645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/645/GCA_900050645.1_7480_8_40	-	st2316
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.94765	32.7	-	FHEV01	68	3107	2909	2/10/16	3/5/17	Contig	SC	SAMEA1464173	GCA_900050655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/655/GCA_900050655.1_7564_8_72	-	st3136
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93297	51.8	-	CHNB01	66	5125	4735	4/21/15	2/28/17	Scaffold	SC	SAMEA2056660	GCA_001359775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/775/GCA_001359775.1_9870_8_71	-	2011-018938
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.9802	39.7	-	FDPB01	22	2186	1956	2/9/16	3/12/17	Scaffold	SC	SAMEA2383017	GCA_900028525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/525/GCA_900028525.1_12754_1_92	-	2842STDY5753561
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.39525	50.4	-	LOHA01	231	5905	5449	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002672	GCA_001607255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/255/GCA_001607255.1_ASM160725v1	-	STEC 2346
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.09987	50.5	-	LOHC01	206	5512	4986	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002676	GCA_001607265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/265/GCA_001607265.1_ASM160726v1	-	STEC 2441
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13242	39.6	-	FDPG01	44	2373	2115	2/6/16	3/13/17	Scaffold	SC	SAMEA2383022	GCA_900028535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/535/GCA_900028535.1_12754_2_2	-	2842STDY5753567
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93357	51.8	-	CEWT01	62	5130	4742	3/10/15	2/28/17	Scaffold	SC	SAMEA2056662	GCA_001359795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/795/GCA_001359795.1_9870_8_77	-	2012-008606
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78684	32.7	-	FGYW01	49	2873	2730	2/10/16	3/5/17	Contig	SC	SAMEA1464517	GCA_900051035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/035/GCA_900051035.1_7564_8_16	-	st2812
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83066	32.7	-	FGYY01	67	2953	2797	2/10/16	3/5/17	Contig	SC	SAMEA1464527	GCA_900051045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/045/GCA_900051045.1_7564_8_17	-	st2815
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69942	52.1	-	CGJU01	41	4854	4505	4/21/15	2/28/17	Scaffold	SC	SAMEA2056699	GCA_001359835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/835/GCA_001359835.1_10060_6_24	-	UI12162
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08318	39.6	-	FDPK01	47	2315	2087	2/9/16	3/13/17	Scaffold	SC	SAMEA2383025	GCA_900028545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/545/GCA_900028545.1_12754_2_5	-	2842STDY5753570
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.07483	50.6	-	LOHB01	85	5326	5008	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002673	GCA_001607295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/295/GCA_001607295.1_ASM160729v1	-	STEC 2359
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.23141	50.7	-	LOIO01	96	5542	5185	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002692	GCA_001607355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/355/GCA_001607355.1_ASM160735v1	-	STEC 2788
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08569	39.7	-	FDQH01	39	2284	2045	2/9/16	3/13/17	Scaffold	SC	SAMEA2383049	GCA_900028555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/555/GCA_900028555.1_12754_2_29	-	2842STDY5753594
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74276	52.1	-	CGKO01	41	4928	4571	4/21/15	2/28/17	Scaffold	SC	SAMEA2056707	GCA_001359875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/875/GCA_001359875.1_10060_6_48	-	UI3930
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84267	32.7	-	FHDQ01	67	2975	2818	2/10/16	3/5/17	Contig	SC	SAMEA1469629	GCA_900051065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/065/GCA_900051065.1_7480_8_58	-	st2419
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78429	32.7	-	FHED01	46	2874	2715	2/10/16	3/5/17	Contig	SC	SAMEA1464562	GCA_900051075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/075/GCA_900051075.1_7748_6_57	-	st2679
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71096	52.1	-	CEWZ01	48	4867	4514	3/10/15	2/28/17	Scaffold	SC	SAMEA2056803	GCA_001359975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/975/GCA_001359975.1_10060_5_16	-	A156
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11425	39.6	-	FDQK01	41	2318	2065	2/9/16	3/13/17	Scaffold	SC	SAMEA2383052	GCA_900028565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/565/GCA_900028565.1_12754_2_32	-	2842STDY5753597
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.32017	50.6	-	LOJB01	94	5620	5284	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002695	GCA_001607365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/365/GCA_001607365.1_ASM160736v1	-	STEC 2839
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.06489	50.5	-	LNZJ01	187	5382	4926	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002604	GCA_001607385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/385/GCA_001607385.1_ASM160738v1	-	STEC 169
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.9887	39.8	-	FEGP01	53	2190	1929	2/9/16	3/13/17	Scaffold	SC	SAMEA2383071	GCA_900028575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/575/GCA_900028575.1_12754_2_51	-	2842STDY5753616
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73258	52	-	CEWX01	48	4889	4542	3/9/15	2/28/17	Scaffold	SC	SAMEA2056805	GCA_001359995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/359/995/GCA_001359995.1_10060_5_22	-	A174
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77799	32.7	-	FHEE01	46	2867	2724	2/10/16	3/6/17	Contig	SC	SAMEA1464575	GCA_900051085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/085/GCA_900051085.1_7748_6_60	-	st2691
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.90524	32.7	-	FHFF01	68	3061	2875	2/10/16	3/5/17	Contig	SC	SAMEA1464655	GCA_900051095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/095/GCA_900051095.1_7521_5_42	-	st1096
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.80423	52	-	CGJN01	49	4978	4629	4/21/15	2/28/17	Scaffold	SC	SAMEA2056813	GCA_001360055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/055/GCA_001360055.1_10060_5_49	-	A261
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15108	39.5	-	FEHD01	48	2380	2139	2/9/16	3/13/17	Scaffold	SC	SAMEA2383085	GCA_900028585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/585/GCA_900028585.1_12754_2_65	-	2842STDY5753630
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.36515	50.8	-	LNZK01	110	5712	5324	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002605	GCA_001607415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/415/GCA_001607415.1_ASM160741v1	-	STEC 196
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.05508	50.7	-	LNZL01	85	5256	4924	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002606	GCA_001607435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/435/GCA_001607435.1_ASM160743v1	-	STEC 200
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98067	39.8	-	FEHI01	22	2199	1959	2/9/16	3/13/17	Scaffold	SC	SAMEA2383090	GCA_900028595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/595/GCA_900028595.1_12754_2_70	-	2842STDY5753635
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72099	52	-	CGJC01	53	4876	4518	4/21/15	2/28/17	Scaffold	SC	SAMEA2056816	GCA_001360075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/075/GCA_001360075.1_10060_5_58	-	102196
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.91657	32.7	-	FHAC01	43	3080	2953	2/10/16	3/6/17	Contig	SC	SAMEA1464503	GCA_900051345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/345/GCA_900051345.1_7564_8_67	-	st3103
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80168	32.7	-	FHBI01	31	2917	2781	2/10/16	3/6/17	Contig	SC	SAMEA1464639	GCA_900051355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/355/GCA_900051355.1_7521_5_34	-	st1062
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70674	52	-	CGJB01	43	4870	4510	4/21/15	2/28/17	Scaffold	SC	SAMEA2056817	GCA_001360095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/095/GCA_001360095.1_10060_5_61	-	107123
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09763	39.6	-	FEHJ01	37	2309	2049	2/9/16	3/13/17	Scaffold	SC	SAMEA2383091	GCA_900028605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/605/GCA_900028605.1_12754_2_71	-	2842STDY5753636
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.16514	50.6	-	LOCX01	162	5540	5168	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002613	GCA_001607445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/445/GCA_001607445.1_ASM160744v1	-	STEC 464
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.60626	50.5	-	LPXA01	214	6049	5584	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002677	GCA_001607455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/455/GCA_001607455.1_ASM160745v1	-	STEC 2450
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06626	39.6	-	FEHK01	51	2284	2055	2/9/16	3/13/17	Scaffold	SC	SAMEA2383092	GCA_900028615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/615/GCA_900028615.1_12754_2_72	-	2842STDY5753637
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.85255	52	-	CGLD01	47	5055	4666	4/21/15	2/28/17	Scaffold	SC	SAMEA2056848	GCA_001360135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/135/GCA_001360135.1_10060_6_90	-	H094420550
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77962	32.7	-	FHBM01	59	2857	2709	2/10/16	3/5/17	Contig	SC	SAMEA1469558	GCA_900051365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/365/GCA_900051365.1_7480_7_13	-	st1140
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77922	32.7	-	FHEQ01	41	2867	2717	2/10/16	3/6/17	Contig	SC	SAMEA1464558	GCA_900051375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/375/GCA_900051375.1_7564_8_54	-	st3001
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72095	52	-	CGIU01	58	4876	4511	4/21/15	2/28/17	Scaffold	SC	SAMEA2056946	GCA_001360175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/175/GCA_001360175.1_10060_5_73	-	B1502
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05124	39.6	-	FEHW01	28	2232	2002	2/9/16	3/13/17	Scaffold	SC	SAMEA2383104	GCA_900028625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/625/GCA_900028625.1_12754_2_84	-	2842STDY5753649
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.52806	50.6	-	LPXB01	182	5904	5472	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002679	GCA_001607495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/495/GCA_001607495.1_ASM160749v1	-	STEC 2505
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	4.97968	50.7	-	LOIG01	236	5347	4875	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002681	GCA_001607515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/515/GCA_001607515.1_ASM160751v1	-	STEC 2564
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98971	39.8	-	FEID01	48	2182	1930	2/9/16	3/6/17	Scaffold	SC	SAMEA2383111	GCA_900028635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/635/GCA_900028635.1_12754_2_91	-	2842STDY5753656
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72039	52	-	CGJR01	57	4880	4521	4/21/15	2/28/17	Scaffold	SC	SAMEA2056948	GCA_001360195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/195/GCA_001360195.1_10060_5_82	-	B4387
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80693	32.8	-	FHET01	49	2930	2761	2/10/16	3/5/17	Contig	SC	SAMEA1464191	GCA_900051385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/385/GCA_900051385.1_7564_8_63	-	st3059
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79578	32.7	-	FGYV01	30	2897	2755	2/10/16	3/5/17	Contig	SC	SAMEA1464542	GCA_900051765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/765/GCA_900051765.1_7748_6_81	-	st2805
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70453	52	-	CGJT01	39	4873	4504	4/21/15	2/28/17	Scaffold	SC	SAMEA2056950	GCA_001360215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/215/GCA_001360215.1_10060_5_88	-	1154
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06063	39.6	-	FEIC01	15	2277	2047	2/9/16	3/13/17	Scaffold	SC	SAMEA2383110	GCA_900028645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/645/GCA_900028645.1_12754_2_90	-	2842STDY5753655
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.38202	50.6	-	LPXC01	234	5827	5320	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002685	GCA_001607635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/635/GCA_001607635.1_ASM160763v1	-	STEC 2620
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.44732	50.5	-	LOIM01	207	5985	5530	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002688	GCA_001607675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/675/GCA_001607675.1_ASM160767v1	-	STEC 2743
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1303	39.6	-	FEJJ01	45	2380	2109	2/9/16	3/6/17	Scaffold	SC	SAMEA2383143	GCA_900028655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/655/GCA_900028655.1_12754_3_28	-	2842STDY5753689
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.84582	52	-	CGJX01	43	5035	4668	4/21/15	2/28/17	Scaffold	SC	SAMEA2056952	GCA_001360235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/235/GCA_001360235.1_10060_5_93	-	1703
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79015	32.7	-	FGYU01	48	2880	2715	2/10/16	3/6/17	Contig	SC	SAMEA1464556	GCA_900051775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/775/GCA_900051775.1_7564_8_14	-	st2808
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.89649	32.7	-	FGZD01	69	3034	2885	2/10/16	3/5/17	Contig	SC	SAMEA1464279	GCA_900051785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/785/GCA_900051785.1_7564_8_26	-	st2880
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.75704	51.9	-	CGSX01	95	4902	4543	4/21/15	2/28/17	Scaffold	SC	SAMEA2056957	GCA_001360255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/255/GCA_001360255.1_10071_3_17	-	TY529
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07784	39.6	-	FEJN01	30	2241	2023	2/9/16	3/5/17	Scaffold	SC	SAMEA2383147	GCA_900028665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/665/GCA_900028665.1_12754_3_32	-	2842STDY5753693
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	4.79331	50.5	-	LOIL01	143	5060	4705	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002687	GCA_001607685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/685/GCA_001607685.1_ASM160768v1	-	STEC 2708
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.26497	50.6	-	LOIN01	166	5539	5156	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002690	GCA_001607715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/715/GCA_001607715.1_ASM160771v1	-	STEC 2764
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01607	39.7	-	FEJU01	26	2210	1964	2/9/16	3/13/17	Scaffold	SC	SAMEA2383154	GCA_900028675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/675/GCA_900028675.1_12754_3_39	-	2842STDY5753700
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.684	52.1	-	CGLG01	43	4836	4483	4/21/15	2/28/17	Scaffold	SC	SAMEA2056959	GCA_001360275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/275/GCA_001360275.1_10071_3_23	-	155749
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86234	32.7	-	FGZC01	52	2987	2827	2/10/16	3/6/17	Contig	SC	SAMEA1464306	GCA_900051795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/795/GCA_900051795.1_7564_8_28	-	st2885
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.75744	32.7	-	FHBJ01	40	2824	2668	2/10/16	3/5/17	Contig	SC	SAMEA1464665	GCA_900051805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/805/GCA_900051805.1_7521_5_25	-	st1025
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74422	52.1	-	CGLE01	45	4912	4538	4/21/15	2/28/17	Scaffold	SC	SAMEA2057105	GCA_001360295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/295/GCA_001360295.1_10071_3_26	-	1647901
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0555	39.6	-	FEJZ01	29	2211	1999	2/9/16	3/13/17	Scaffold	SC	SAMEA2383159	GCA_900028685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/685/GCA_900028685.1_12754_3_44	-	2842STDY5753705
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.04518	50.8	-	LOJA01	136	5299	4947	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002694	GCA_001607755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/755/GCA_001607755.1_ASM160775v1	-	STEC 2826
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.07965	50.5	-	LOIQ01	70	5162	4852	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002696	GCA_001607765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/765/GCA_001607765.1_ASM160776v1	-	STEC 2841
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05273	39.6	-	FEKK01	26	2263	2022	2/9/16	3/13/17	Scaffold	SC	SAMEA2383170	GCA_900028695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/695/GCA_900028695.1_12754_3_55	-	2842STDY5753716
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93252	51.8	-	CFAJ01	73	5120	4745	3/10/15	2/28/17	Scaffold	SC	SAMEA2058230	GCA_001360515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/515/GCA_001360515.1_9870_8_13	-	2008-002960
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83443	32.7	-	FHCA01	43	2931	2784	2/10/16	3/5/17	Contig	SC	SAMEA1464660	GCA_900051815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/815/GCA_900051815.1_7521_6_67	-	st1666
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86664	32.7	-	FHCV01	53	3005	2823	2/10/16	3/5/17	Contig	SC	SAMEA1317337	GCA_900052115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/115/GCA_900052115.1_7469_7_66	-	st2027
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93224	51.8	-	CEXX01	67	5122	4741	3/13/15	2/28/17	Scaffold	SC	SAMEA2058426	GCA_001360595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/595/GCA_001360595.1_9870_8_55	-	01-2011-001522
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04554	39.7	-	FELF01	39	2249	2032	2/9/16	3/13/17	Scaffold	SC	SAMEA2383191	GCA_900028705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/705/GCA_900028705.1_12754_3_76	-	2842STDY5753737
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.06699	50.4	-	LOIT01	263	5566	4985	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002699	GCA_001607835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/835/GCA_001607835.1_ASM160783v1	-	STEC 2894.2
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.16793	50.4	-	LOIV01	168	5527	5106	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002701	GCA_001607845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/845/GCA_001607845.1_ASM160784v1	-	STEC 2938
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.03812	39.7	-	FELN01	45	2260	2047	2/9/16	3/12/17	Scaffold	SC	SAMEA2383199	GCA_900028715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/715/GCA_900028715.1_12754_3_84	-	2842STDY5753745
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72326	52	-	CHGF01	46	4880	4521	4/21/15	2/28/17	Scaffold	SC	SAMEA2058427	GCA_001360615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/615/GCA_001360615.1_9870_8_58	-	2011-007930
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.7158	32.7	-	FHCU01	18	2832	2680	2/10/16	3/5/17	Contig	SC	SAMEA1464436	GCA_900052125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/125/GCA_900052125.1_7748_6_28	-	st2045
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8301	32.8	-	FGZT01	41	2939	2791	2/10/16	3/6/17	Contig	SC	SAMEA1464234	GCA_900052345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/345/GCA_900052345.1_7564_8_53	-	st2999
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93347	51.8	-	CHMX01	68	5138	4740	4/21/15	2/28/17	Scaffold	SC	SAMEA2058616	GCA_001360675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/675/GCA_001360675.1_9870_8_91	-	2012-009913
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98082	39.7	-	FELW01	22	2207	1961	2/9/16	3/13/17	Scaffold	SC	SAMEA2383208	GCA_900028725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/725/GCA_900028725.1_12754_3_93	-	2842STDY5753754
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.60953	50.3	-	LOIU01	280	6182	5674	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002700	GCA_001607875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/875/GCA_001607875.1_ASM160787v1	-	STEC 2920
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.40101	50.6	-	LOIX01	94	5775	5382	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002704	GCA_001607925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/925/GCA_001607925.1_ASM160792v1	-	STEC 2962
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10948	39.6	-	FEMA01	32	2304	2052	2/9/16	3/13/17	Scaffold	SC	SAMEA2383212	GCA_900028735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/735/GCA_900028735.1_12754_4_2	-	2842STDY5753759
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73026	52	-	CGJM01	51	4879	4535	4/21/15	2/28/17	Scaffold	SC	SAMEA2058620	GCA_001360695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/695/GCA_001360695.1_10060_5_9	-	A143
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84889	32.7	-	FHAK01	52	2951	2794	2/10/16	3/5/17	Contig	SC	SAMEA1464423	GCA_900052355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/355/GCA_900052355.1_7564_8_79	-	st3203
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84076	32.7	-	FHCB01	53	2945	2788	2/10/16	3/5/17	Contig	SC	SAMEA1464664	GCA_900052365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/365/GCA_900052365.1_7521_6_75	-	st1692
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.59382	52.1	-	CGIR01	53	4717	4367	4/21/15	2/28/17	Scaffold	SC	SAMEA2058625	GCA_001360775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/775/GCA_001360775.1_10060_5_24	-	A180
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08612	39.5	-	FDYT01	61	2307	2026	2/9/16	3/13/17	Scaffold	SC	SAMEA2238423	GCA_900028765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/765/GCA_900028765.1_11860_5_54	-	2842STDY5643793
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.22798	50.4	-	LOGX01	198	5655	5209	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002668	GCA_001607975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/975/GCA_001607975.1_ASM160797v1	-	STEC 2211
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.0874	50.5	-	LOCR01	211	5467	4952	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002607	GCA_001607995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/607/995/GCA_001607995.1_ASM160799v1	-	STEC 299
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99259	39.8	-	FEEY01	47	2185	1929	2/9/16	3/15/17	Scaffold	SC	SAMEA2238711	GCA_900028775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/775/GCA_900028775.1_11861_2_51	-	2842STDY5644084
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72252	52.1	-	CGIW01	61	4891	4543	4/21/15	2/28/17	Scaffold	SC	SAMEA2058626	GCA_001360795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/795/GCA_001360795.1_10060_5_30	-	A239
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83602	32.7	-	FHCW01	69	2941	2789	2/10/16	3/6/17	Contig	SC	SAMEA1317360	GCA_900052375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/375/GCA_900052375.1_7469_7_73	-	st2064
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.94929	32.7	-	FGYT01	57	3115	2920	2/10/16	3/5/17	Contig	SC	SAMEA1464356	GCA_900052635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/635/GCA_900052635.1_7748_6_78	-	st2797
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71959	52	-	CIBH01	47	4879	4520	4/21/15	2/28/17	Scaffold	SC	SAMEA2058810	GCA_001360875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/875/GCA_001360875.1_10060_5_60	-	106774
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0709	39.6	-	FCUU01	33	2294	2060	2/6/16	3/15/17	Scaffold	SC	SAMEA2238852	GCA_900028785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/785/GCA_900028785.1_12216_4_92	-	2842STDY5644227
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.70482	50.2	-	LOFJ01	262	6284	5758	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002623	GCA_001608005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/005/GCA_001608005.1_ASM160800v1	-	STEC 690
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.50155	50.4	-	LOCV01	287	6030	5543	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002611	GCA_001608015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/015/GCA_001608015.1_ASM160801v1	-	STEC 380
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00372	39.7	-	FCXF01	31	2214	1988	2/6/16	3/13/17	Scaffold	SC	SAMEA2238948	GCA_900028795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/795/GCA_900028795.1_11861_3_95	-	2842STDY5644324
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71931	52	-	CGIL01	68	4871	4517	4/21/15	3/2/17	Scaffold	SC	SAMEA2058811	GCA_001360895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/895/GCA_001360895.1_10060_5_63	-	108891
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85501	32.7	-	FGYS01	28	2964	2834	2/10/16	3/5/17	Contig	SC	SAMEA1464381	GCA_900052645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/645/GCA_900052645.1_7748_6_79	-	st2801
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79671	32.7	-	FHBT01	44	2893	2745	2/10/16	3/5/17	Contig	SC	SAMEA1464330	GCA_900052655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/655/GCA_900052655.1_7521_5_70	-	st1425
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72149	52	-	CGIT01	53	4882	4519	4/21/15	2/28/17	Scaffold	SC	SAMEA2058815	GCA_001360915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/915/GCA_001360915.1_10060_5_78	-	B1616
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00477	39.8	-	FCYN01	27	2216	1993	2/6/16	3/13/17	Scaffold	SC	SAMEA2238985	GCA_900028805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/805/GCA_900028805.1_11861_4_38	-	2842STDY5644361
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.56273	50.3	-	LOCU01	251	6135	5605	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002610	GCA_001608055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/055/GCA_001608055.1_ASM160805v1	-	STEC 370
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.40509	50.4	-	LOFP01	282	5951	5479	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002629	GCA_001608075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/075/GCA_001608075.1_ASM160807v1	-	STEC 764
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11103	39.6	-	FCYO01	36	2302	2059	2/6/16	3/13/17	Scaffold	SC	SAMEA2238990	GCA_900028815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/815/GCA_900028815.1_11861_4_44	-	2842STDY5644366
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81399	52	-	CGKN01	51	4988	4617	4/21/15	2/28/17	Scaffold	SC	SAMEA2058821	GCA_001360995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/360/995/GCA_001360995.1_10071_3_1	-	1738
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85276	32.7	-	FHCC01	54	2969	2816	2/10/16	3/5/17	Contig	SC	SAMEA1464604	GCA_900052665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/665/GCA_900052665.1_7521_6_81	-	st1708
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81509	32.7	-	FHFD01	65	2907	2770	2/10/16	3/5/17	Contig	SC	SAMEA1464567	GCA_900052675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/675/GCA_900052675.1_7554_6_33	-	st186
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73821	52.1	-	CIBO01	43	4905	4561	4/21/15	2/28/17	Scaffold	SC	SAMEA2058823	GCA_001361015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/015/GCA_001361015.1_10071_3_7	-	TY032
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11243	39.6	-	FDCU01	56	2323	2061	2/6/16	3/13/17	Scaffold	SC	SAMEA2382683	GCA_900028825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/825/GCA_900028825.1_12673_7_43	-	2842STDY5753224
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.71443	50.2	-	LOFO01	269	6304	5778	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002628	GCA_001608085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/085/GCA_001608085.1_ASM160808v1	-	STEC 757
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.28199	50.6	-	LOGQ01	171	5730	5312	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002657	GCA_001608105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/105/GCA_001608105.1_ASM160810v1	-	STEC 1532
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01727	39.8	-	FDIH01	22	2239	2010	2/6/16	3/5/17	Scaffold	SC	SAMEA2382827	GCA_900028835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/835/GCA_900028835.1_12718_4_92	-	2842STDY5753369
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.84646	52	-	CGSY01	49	5039	4673	4/21/15	2/28/17	Scaffold	SC	SAMEA2059018	GCA_001361035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/035/GCA_001361035.1_10071_3_13	-	TY121
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86586	32.7	-	FHAH01	58	2974	2816	2/10/16	3/5/17	Contig	SC	SAMEA1464198	GCA_900053455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/455/GCA_900053455.1_7564_8_74	-	st3171
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84421	32.7	-	FHBK01	63	2974	2818	2/10/16	3/5/17	Contig	SC	SAMEA1469546	GCA_900053465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/465/GCA_900053465.1_7480_7_4	-	st1118
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73837	52.1	-	CGTG01	46	4909	4558	4/21/15	2/28/17	Scaffold	SC	SAMEA2059019	GCA_001361055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/055/GCA_001361055.1_10071_3_16	-	TY524
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99375	39.8	-	FDJS01	45	2193	1938	2/6/16	3/12/17	Scaffold	SC	SAMEA2382870	GCA_900028845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/845/GCA_900028845.1_12718_5_40	-	2842STDY5753413
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.5311	50.6	-	LOGS01	158	5897	5524	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002659	GCA_001608155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/155/GCA_001608155.1_ASM160815v1	-	STEC 1634
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.33973	50.7	-	LOGR01	150	5751	5339	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002658	GCA_001608165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/165/GCA_001608165.1_ASM160816v1	-	STEC 1585
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05693	39.7	-	FDJW01	27	2253	2016	2/6/16	3/5/17	Scaffold	SC	SAMEA2382875	GCA_900028855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/855/GCA_900028855.1_12718_5_45	-	2842STDY5753418
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69701	52.1	-	CHLE01	42	4871	4512	4/21/15	2/28/17	Scaffold	SC	SAMEA2059022	GCA_001361095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/095/GCA_001361095.1_10071_3_25	-	175806
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.96286	32.7	-	FHCG01	61	3121	2936	2/10/16	3/5/17	Contig	SC	SAMEA1317565	GCA_900053475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/475/GCA_900053475.1_7469_7_6	-	st1777
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82781	32.7	-	FHCY01	44	2926	2781	2/10/16	3/5/17	Contig	SC	SAMEA1317464	GCA_900053485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/485/GCA_900053485.1_7469_7_81	-	st2117
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73281	52	-	CGLH01	43	4892	4532	4/21/15	2/28/17	Scaffold	SC	SAMEA2059023	GCA_001361115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/115/GCA_001361115.1_10071_3_28	-	1025617
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99091	39.8	-	FDJY01	47	2188	1927	2/6/16	3/13/17	Scaffold	SC	SAMEA2382877	GCA_900028865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/865/GCA_900028865.1_12718_5_47	-	2842STDY5753420
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.25622	50.6	-	LPWZ01	157	5668	5269	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002675	GCA_001608205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/205/GCA_001608205.1_ASM160820v1	-	STEC 2419
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	4.93256	50.6	-	LOFY01	75	5204	4834	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002638	GCA_001608235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/235/GCA_001608235.1_ASM160823v1	-	STEC 1198
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.97886	39.7	-	FDOB01	26	2167	1944	2/6/16	3/13/17	Scaffold	SC	SAMEA2382989	GCA_900028875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/875/GCA_900028875.1_12754_1_64	-	2842STDY5753533
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.78118	52.1	-	CHLG01	50	4973	4613	4/21/15	2/28/17	Scaffold	SC	SAMEA2059032	GCA_001361155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/155/GCA_001361155.1_10071_3_55	-	542825
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8714	32.7	-	FGYK01	60	3001	2842	2/10/16	3/5/17	Contig	SC	SAMEA1464715	GCA_900053925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/925/GCA_900053925.1_7748_6_67	-	st2759
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.74009	32.7	-	FHAN01	30	2810	2662	2/10/16	3/5/17	Contig	SC	SAMEA1464496	GCA_900053935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/935/GCA_900053935.1_7564_8_83	-	st3241
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.60852	52.1	-	CGVM01	52	4736	4395	4/21/15	2/28/17	Scaffold	SC	SAMEA2059360	GCA_001361175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/175/GCA_001361175.1_9953_5_46	-	A375
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1235	39.5	-	FDOK01	61	2349	2078	2/6/16	3/13/17	Scaffold	SC	SAMEA2382999	GCA_900028885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/885/GCA_900028885.1_12754_1_74	-	2842STDY5753543
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.05334	50.5	-	LNFT01	194	5486	4910	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002602	GCA_001608265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/265/GCA_001608265.1_ASM160826v1	-	STEC 66
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.16325	50.8	-	LNFV01	109	5464	5099	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002603	GCA_001608285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/608/285/GCA_001608285.1_ASM160828v1	-	STEC 168
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11984	39.5	-	FDOP01	52	2350	2080	2/6/16	3/13/17	Scaffold	SC	SAMEA2383004	GCA_900028895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/895/GCA_900028895.1_12754_1_79	-	2842STDY5753548
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.60822	52.1	-	CHMO01	52	4746	4403	4/21/15	2/28/17	Scaffold	SC	SAMEA2059361	GCA_001361195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/195/GCA_001361195.1_9953_5_52	-	A382
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78426	32.7	-	FHAL01	70	2879	2734	2/10/16	3/5/17	Contig	SC	SAMEA1464377	GCA_900054175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/175/GCA_900054175.1_7564_8_80	-	st3214
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80293	32.7	-	FGYC01	39	2893	2744	2/10/16	3/5/17	Contig	SC	SAMEA1464460	GCA_900054445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/445/GCA_900054445.1_7748_6_55	-	st2674
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73345	52	-	CHNE01	80	4897	4537	4/21/15	2/28/17	Scaffold	SC	SAMEA2059363	GCA_001361215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/215/GCA_001361215.1_9953_5_58	-	A395
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13131	39.5	-	FDOW01	41	2367	2144	2/9/16	3/13/17	Scaffold	SC	SAMEA2383011	GCA_900028905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/905/GCA_900028905.1_12754_1_86	-	2842STDY5753555
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.34647	50.8	-	LPUJ01	118	5681	5281	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002709	GCA_001609255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/255/GCA_001609255.1_ASM160925v1	-	STEC 3084
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.30908	50.8	-	LPUK01	94	5652	5272	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002710	GCA_001609265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/265/GCA_001609265.1_ASM160926v1	-	STEC 3087
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01581	39.7	-	FDPA01	17	2245	2004	2/9/16	3/6/17	Scaffold	SC	SAMEA2383016	GCA_900028915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/915/GCA_900028915.1_12754_1_91	-	2842STDY5753560
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72322	52	-	CGKF01	58	4881	4516	4/21/15	2/28/17	Scaffold	SC	SAMEA2059525	GCA_001361295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/295/GCA_001361295.1_10060_6_4	-	LPB866
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84649	32.7	-	FGYD01	51	2988	2802	2/10/16	3/5/17	Contig	SC	SAMEA1464435	GCA_900054455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/455/GCA_900054455.1_7748_6_58	-	st2682
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83738	32.7	-	FHCD01	49	2938	2779	2/10/16	3/5/17	Contig	SC	SAMEA1464565	GCA_900054465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/465/GCA_900054465.1_7521_6_89	-	st1730
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73739	52.1	-	CGKZ01	44	4916	4564	4/21/15	2/28/17	Scaffold	SC	SAMEA2059526	GCA_001361315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/315/GCA_001361315.1_10060_6_7	-	SV170
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04945	39.6	-	FDPJ01	30	2258	2012	2/9/16	3/13/17	Scaffold	SC	SAMEA2383026	GCA_900028925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/925/GCA_900028925.1_12754_2_6	-	2842STDY5753571
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.35799	50.7	-	LPUN01	135	5705	5309	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002713	GCA_001609315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/315/GCA_001609315.1_ASM160931v1	-	STEC 3106
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.12199	50.5	-	LPUL01	174	5490	5110	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002711	GCA_001609335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/335/GCA_001609335.1_ASM160933v1	-	STEC 3094
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99207	39.8	-	FDPL01	43	2184	1929	2/9/16	3/13/17	Scaffold	SC	SAMEA2383027	GCA_900028935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/935/GCA_900028935.1_12754_2_7	-	2842STDY5753572
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70897	52.1	-	CGJW01	43	4866	4517	4/21/15	2/28/17	Scaffold	SC	SAMEA2059528	GCA_001361355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/355/GCA_001361355.1_10060_6_13	-	SV430
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78681	32.7	-	FHDA01	44	2879	2730	2/10/16	3/5/17	Contig	SC	SAMEA1317418	GCA_900054475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/475/GCA_900054475.1_7469_7_90	-	st2168
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82871	32.7	-	FHFC01	55	2926	2775	2/10/16	3/5/17	Contig	SC	SAMEA1317316	GCA_900054485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/485/GCA_900054485.1_7414_7_62	-	st407
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74194	52.1	-	CGJJ01	43	4925	4575	4/21/15	2/28/17	Scaffold	SC	SAMEA2059532	GCA_001361395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/395/GCA_001361395.1_10060_6_25	-	UI13529-2
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01445	39.8	-	FEGX01	21	2253	2000	2/9/16	3/13/17	Scaffold	SC	SAMEA2383081	GCA_900028945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/945/GCA_900028945.1_12754_2_61	-	2842STDY5753626
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.27342	50.3	-	LODC01	191	5692	5246	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002618	GCA_001609735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/735/GCA_001609735.1_ASM160973v1	-	STEC 559
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.28718	50.5	-	LODB01	473	5603	5156	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002617	GCA_001609745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/745/GCA_001609745.1_ASM160974v1	-	STEC 545
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99415	39.8	-	FEIP01	49	2216	1933	2/9/16	3/13/17	Scaffold	SC	SAMEA2383122	GCA_900028955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/955/GCA_900028955.1_12754_3_7	-	2842STDY5753668
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72248	52	-	CGKA01	50	4883	4528	4/21/15	2/28/17	Scaffold	SC	SAMEA2059535	GCA_001361435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/435/GCA_001361435.1_10060_6_40	-	UI3564
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86761	32.6	-	FHFK01	50	2998	2814	2/10/16	3/5/17	Contig	SC	SAMEA1464430	GCA_900054495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/495/GCA_900054495.1_7521_6_58	-	st1642
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.74672	32.7	-	FGYL01	18	2812	2696	2/10/16	3/6/17	Contig	SC	SAMEA1464721	GCA_900054705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/705/GCA_900054705.1_7748_6_68	-	st2761
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93395	51.8	-	CEZL01	54	5132	4749	3/10/15	2/28/17	Scaffold	SC	SAMEA2059537	GCA_001361475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/475/GCA_001361475.1_10060_6_49	-	UI4389
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0437	39.7	-	FEIQ01	39	2222	2004	2/9/16	3/6/17	Scaffold	SC	SAMEA2383124	GCA_900028965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/965/GCA_900028965.1_12754_3_9	-	2842STDY5753670
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.65282	50.3	-	LODA01	317	6261	5739	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002616	GCA_001609765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/765/GCA_001609765.1_ASM160976v1	-	STEC 487
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.54913	50.4	-	LODD01	260	6103	5568	4/4/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN04002619	GCA_001609855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/609/855/GCA_001609855.1_ASM160985v1	-	STEC 563
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0605	39.5	-	FEIT01	34	2282	2039	2/9/16	3/13/17	Scaffold	SC	SAMEA2383127	GCA_900028975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/975/GCA_900028975.1_12754_3_12	-	2842STDY5753673
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73176	52	-	CGKB01	46	4886	4542	4/21/15	2/28/17	Scaffold	SC	SAMEA2059686	GCA_001361535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/535/GCA_001361535.1_10060_6_61	-	UI5685-2
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.7679	32.8	-	FHDY01	20	2874	2725	2/10/16	3/6/17	Contig	SC	SAMEA1464232	GCA_900054715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/715/GCA_900054715.1_7748_6_39	-	st2581
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79928	32.7	-	FHCK01	46	2892	2750	2/10/16	3/5/17	Contig	SC	SAMEA1317346	GCA_900054915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/915/GCA_900054915.1_7469_7_23	-	st1824
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74351	52.1	-	CGKI01	70	4928	4559	4/21/15	2/28/17	Scaffold	SC	SAMEA2059687	GCA_001361555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/555/GCA_001361555.1_10060_6_64	-	UX309
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98871	39.8	-	FELE01	45	2202	1929	2/9/16	3/13/17	Scaffold	SC	SAMEA2383190	GCA_900028985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/985/GCA_900028985.1_12754_3_75	-	2842STDY5753736
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.98702	50.6	-	LVLM01	161	5200	4768	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376722	GCA_001614325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/325/GCA_001614325.1_ASM161432v1	-	cattle3
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.77424	50.5	-	LVLK01	423	5352	4711	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376720	GCA_001614375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/375/GCA_001614375.1_ASM161437v1	-	cattle1
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.16509	39.5	-	FEOT01	42	2379	2122	2/9/16	3/13/17	Scaffold	SC	SAMEA2674653	GCA_900028995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/028/995/GCA_900028995.1_14412_3_31	-	2842STDY5881913
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82655	52	-	CHFU01	41	5017	4656	4/21/15	2/28/17	Scaffold	SC	SAMEA2064151	GCA_001361615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/615/GCA_001361615.1_10071_8_18	-	Gen-0018
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80227	32.7	-	FHEW01	53	2898	2741	2/10/16	3/5/17	Contig	SC	SAMEA1464288	GCA_900054925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/925/GCA_900054925.1_7564_8_87	-	st3262
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.90808	32.7	-	FHFA01	62	3076	2881	2/10/16	3/5/17	Contig	SC	SAMEA1464619	GCA_900054935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/935/GCA_900054935.1_7712_8_71	-	st821
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82645	52	-	CEZY01	41	5009	4649	3/11/15	2/28/17	Scaffold	SC	SAMEA2066173	GCA_001361755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/755/GCA_001361755.1_10071_8_1	-	Gen-0001
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0592	39.6	-	FEOV01	40	2236	1996	2/9/16	3/6/17	Scaffold	SC	SAMEA2674659	GCA_900029005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/005/GCA_900029005.1_14412_3_37	-	2842STDY5881920
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.99034	50.5	-	LVLN01	381	5413	4807	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376723	GCA_001614385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/385/GCA_001614385.1_ASM161438v1	-	cattle4
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.96631	50.6	-	LVLL01	272	5349	4855	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376721	GCA_001614395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/395/GCA_001614395.1_ASM161439v1	-	cattle2
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04811	39.6	-	FDIJ01	32	2249	2012	2/6/16	3/5/17	Scaffold	SC	SAMEA2382831	GCA_900029215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/215/GCA_900029215.1_12718_5_1	-	2842STDY5753374
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7257	52	-	CGTH01	42	4879	4518	4/21/15	2/28/17	Scaffold	SC	SAMEA2066345	GCA_001361775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/775/GCA_001361775.1_10071_8_79	-	2010K-0509
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87034	32.7	-	FHFL01	50	2977	2821	2/10/16	3/5/17	Contig	SC	SAMEA1464408	GCA_900054945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/945/GCA_900054945.1_7521_6_78	-	st1701
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79511	32.7	-	FGYJ01	38	2888	2738	2/10/16	3/5/17	Contig	SC	SAMEA1464674	GCA_900055265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/265/GCA_900055265.1_7748_6_65	-	st2733
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.76806	52.1	-	CHLQ01	39	4926	4563	4/21/15	2/28/17	Scaffold	SC	SAMEA2066524	GCA_001361815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/815/GCA_001361815.1_10209_5_26	-	LNT358
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07317	39.6	-	FEAT01	36	2258	2011	2/9/16	3/15/17	Scaffold	SC	SAMEA2238511	GCA_900029385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/385/GCA_900029385.1_11860_6_46	-	2842STDY5643882
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.91155	50.5	-	LVLP01	261	5261	4782	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376725	GCA_001614405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/405/GCA_001614405.1_ASM161440v1	-	cattle6
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.74469	50.8	-	LVLQ01	295	5131	4622	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376726	GCA_001614455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/455/GCA_001614455.1_ASM161445v1	-	cattle7
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06633	39.7	-	FEAX01	49	2257	2014	2/9/16	3/13/17	Scaffold	SC	SAMEA2238518	GCA_900029395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/395/GCA_900029395.1_11860_6_53	-	2842STDY5643889
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82479	52	-	CHFT01	42	5004	4650	4/21/15	2/28/17	Scaffold	SC	SAMEA2067635	GCA_001361875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/875/GCA_001361875.1_10071_8_38	-	Gen-0038
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82442	32.7	-	FGYQ01	50	2930	2765	2/10/16	3/5/17	Contig	SC	SAMEA1464346	GCA_900055275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/275/GCA_900055275.1_7748_6_75	-	st2787
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78413	32.7	-	FGZV01	43	2878	2728	2/10/16	3/6/17	Contig	SC	SAMEA1464276	GCA_900055285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/285/GCA_900055285.1_7564_8_58	-	st3023
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82714	52	-	CFAD01	44	5012	4652	3/10/15	2/28/17	Scaffold	SC	SAMEA2067640	GCA_001361895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/361/895/GCA_001361895.1_10071_8_53	-	Gen-0053
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0614	39.6	-	FEAZ01	22	2277	2043	2/9/16	3/6/17	Scaffold	SC	SAMEA2238524	GCA_900029405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/405/GCA_900029405.1_11860_6_58	-	2842STDY5643895
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.84669	50.6	-	LVLS01	252	5172	4709	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376728	GCA_001614475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/475/GCA_001614475.1_ASM161447v1	-	cattle9
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.11317	50.6	-	LVLO01	237	5419	4889	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376724	GCA_001614485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/485/GCA_001614485.1_ASM161448v1	-	cattle5
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.16433	39.5	-	FECN01	46	2402	2162	2/9/16	3/13/17	Scaffold	SC	SAMEA2238588	GCA_900029415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/415/GCA_900029415.1_11861_1_25	-	2842STDY5643960
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72429	52	-	CGLP01	53	4877	4508	4/21/15	2/28/17	Scaffold	SC	SAMEA2072658	GCA_001362075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/075/GCA_001362075.1_10349_1_59	-	ERL103534
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79152	32.7	-	FHDL01	65	2898	2725	2/10/16	3/5/17	Contig	SC	SAMEA1469695	GCA_900055305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/305/GCA_900055305.1_7480_8_43	-	st2343
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82858	32.7	-	FGZM01	49	2914	2769	2/10/16	3/5/17	Contig	SC	SAMEA1464606	GCA_900055645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/645/GCA_900055645.1_7564_8_43	-	st2932
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.88113	51.9	-	CGTJ01	127	4964	4531	4/21/15	2/28/17	Scaffold	SC	SAMEA2072787	GCA_001362115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/115/GCA_001362115.1_10349_1_71	-	ERL114224
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01105	39.7	-	FCPO01	21	2228	2002	2/6/16	3/13/17	Scaffold	SC	SAMEA2238312	GCA_900029425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/425/GCA_900029425.1_11860_4_38	-	2842STDY5643681
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.039	50.5	-	LVLR01	336	5455	4903	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376727	GCA_001614535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/535/GCA_001614535.1_ASM161453v1	-	cattle8
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.39205	49.8	-	LVLT01	478	5662	5066	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376729	GCA_001614565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/565/GCA_001614565.1_ASM161456v1	-	cattle10
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12129	39.5	-	FCUX01	29	2364	2136	2/6/16	3/13/17	Scaffold	SC	SAMEA2238860	GCA_900029435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/435/GCA_900029435.1_11861_3_5	-	2842STDY5644235
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73921	52.1	-	CFAV01	55	4899	4522	3/10/15	2/28/17	Scaffold	SC	SAMEA2072791	GCA_001362155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/155/GCA_001362155.1_10349_1_77	-	ERL12680
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8165	32.7	-	FGZR01	51	2914	2762	2/10/16	3/5/17	Contig	SC	SAMEA1464246	GCA_900055945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/945/GCA_900055945.1_7564_8_50	-	st2968
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84284	32.7	-	FHDI01	57	2958	2812	2/10/16	3/6/17	Contig	SC	SAMEA1469720	GCA_900055955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/955/GCA_900055955.1_7480_8_22	-	st2246
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.68437	52.1	-	CHLJ01	55	4845	4468	4/21/15	2/28/17	Scaffold	SC	SAMEA2072797	GCA_001362215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/215/GCA_001362215.1_10349_1_86	-	SGB87
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99233	39.8	-	FCVT01	46	2203	1931	2/6/16	3/13/17	Scaffold	SC	SAMEA2238890	GCA_900029445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/445/GCA_900029445.1_11861_3_37	-	2842STDY5644265
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.13772	50.5	-	LVPD01	68	5426	5106	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376817	GCA_001614645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/645/GCA_001614645.1_ASM161464v1	-	sheep8
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.10433	50.6	-	LVLY01	55	5341	5027	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376734	GCA_001614695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/695/GCA_001614695.1_ASM161469v1	-	cattle15
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11937	39.7	-	FCWQ01	55	2344	2091	2/6/16	3/12/17	Scaffold	SC	SAMEA2238928	GCA_900029455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/455/GCA_900029455.1_11861_3_76	-	2842STDY5644303
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71591	52	-	CGTI01	55	4862	4504	4/21/15	2/28/17	Scaffold	SC	SAMEA2072811	GCA_001362235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/235/GCA_001362235.1_10349_1_48	-	ERL094053
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79807	32.7	-	FGZA01	43	2893	2746	2/10/16	3/5/17	Contig	SC	SAMEA1464641	GCA_900056255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/255/GCA_900056255.1_7564_8_22	-	st2832
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83498	32.7	-	FHAO01	51	2933	2773	2/10/16	3/5/17	Contig	SC	SAMEA1464481	GCA_900056265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/265/GCA_900056265.1_7564_8_85	-	st3258
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82839	52	-	CGTM01	42	5012	4637	4/21/15	2/28/17	Scaffold	SC	SAMEA2072894	GCA_001362255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/255/GCA_001362255.1_10349_1_14	-	ERL04140
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11274	39.6	-	FCXY01	45	2340	2096	2/6/16	3/13/17	Scaffold	SC	SAMEA2238966	GCA_900029465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/465/GCA_900029465.1_11861_4_18	-	2842STDY5644342
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.94603	50.8	-	LVPF01	57	5121	4829	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376819	GCA_001614725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/725/GCA_001614725.1_ASM161472v1	-	sheep10
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.83121	50.7	-	LVMB01	77	5040	4692	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376737	GCA_001614775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/775/GCA_001614775.1_ASM161477v1	-	cattle18
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0475	39.7	-	FCYF01	41	2265	2036	2/6/16	3/13/17	Scaffold	SC	SAMEA2238976	GCA_900029475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/475/GCA_900029475.1_11861_4_28	-	2842STDY5644352
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82591	52	-	CFAM01	56	5022	4632	3/10/15	2/28/17	Scaffold	SC	SAMEA2072899	GCA_001362275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/275/GCA_001362275.1_10349_1_29	-	ERL07264
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78336	32.7	-	FHAT01	51	2872	2726	2/10/16	3/6/17	Contig	SC	SAMEA1464717	GCA_900056285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/285/GCA_900056285.1_7564_8_92	-	st3283
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82879	32.7	-	FHCI01	27	2974	2819	2/10/16	3/5/17	Contig	SC	SAMEA1464546	GCA_900056305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/305/GCA_900056305.1_7748_6_26	-	st1815
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72004	52	-	CIBI01	57	4890	4521	4/21/15	2/28/17	Scaffold	SC	SAMEA2072904	GCA_001362295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/295/GCA_001362295.1_10349_1_44	-	ERL091300
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98856	39.7	-	FCYV01	19	2207	1967	2/6/16	3/13/17	Scaffold	SC	SAMEA2674595	GCA_900029485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/485/GCA_900029485.1_14355_8_68	-	2842STDY5881855
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.94204	50.6	-	LVMD01	265	5327	4761	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376739	GCA_001614805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/805/GCA_001614805.1_ASM161480v1	-	swine1
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.5727	50.5	-	LVME01	369	6216	5470	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376740	GCA_001614855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/855/GCA_001614855.1_ASM161485v1	-	swine2
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0249	39.7	-	FDDU01	42	2216	1970	2/6/16	3/12/17	Scaffold	SC	SAMEA2382709	GCA_900029495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/495/GCA_900029495.1_12673_7_69	-	2842STDY5753250
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71859	52	-	CVLH01	55	4864	4488	4/9/15	2/28/17	Scaffold	SC	SAMEA2072907	GCA_001362315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/315/GCA_001362315.1_10349_1_95	-	SGB112
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85248	32.7	-	FHDB01	53	2967	2802	2/10/16	3/5/17	Contig	SC	SAMEA1317397	GCA_900056315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/315/GCA_900056315.1_7469_7_93	-	st2181
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83058	32.7	-	FGZG01	66	2941	2791	2/10/16	3/5/17	Contig	SC	SAMEA1464248	GCA_900056665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/665/GCA_900056665.1_7564_8_32	-	st2897
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74012	52.1	-	CGLO01	54	4917	4530	4/21/15	2/28/17	Scaffold	SC	SAMEA2072935	GCA_001362355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/355/GCA_001362355.1_10349_1_87	-	SGB88
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99244	39.8	-	FDDQ01	51	2197	1934	2/6/16	3/15/17	Scaffold	SC	SAMEA2382705	GCA_900029505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/505/GCA_900029505.1_12673_7_65	-	2842STDY5753246
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.33068	50.2	-	LVMH01	541	5957	5081	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376743	GCA_001614955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/955/GCA_001614955.1_ASM161495v1	-	swine5
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.99844	50.5	-	LVMI01	289	5353	4776	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376744	GCA_001614965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/965/GCA_001614965.1_ASM161496v1	-	swine6
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13477	39.6	-	FDDW01	38	2370	2131	2/6/16	3/6/17	Scaffold	SC	SAMEA2382711	GCA_900029515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/515/GCA_900029515.1_12673_7_71	-	2842STDY5753252
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72152	52	-	CVBN01	56	4868	4507	4/2/15	3/2/17	Scaffold	SC	SAMEA2142524	GCA_001362415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/415/GCA_001362415.1_10426_1_55	-	dty1-89
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79981	32.7	-	FHAS01	41	2891	2747	2/10/16	3/5/17	Contig	SC	SAMEA1464453	GCA_900056675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/675/GCA_900056675.1_7564_8_91	-	st3281
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82742	32.7	-	FGZU01	38	2924	2771	2/10/16	3/5/17	Contig	SC	SAMEA1464311	GCA_900056955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/955/GCA_900056955.1_7564_8_56	-	st3020
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71015	52.1	-	CVGN01	62	4877	4506	4/2/15	2/28/17	Scaffold	SC	SAMEA2142543	GCA_001362435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/435/GCA_001362435.1_10561_2_88	-	ty2-68
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15381	39.6	-	FDEJ01	28	2393	2142	2/6/16	3/13/17	Scaffold	SC	SAMEA2382724	GCA_900029525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/525/GCA_900029525.1_12673_7_84	-	2842STDY5753265
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.10172	50.6	-	LVMJ01	595	5777	5011	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376745	GCA_001615015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/015/GCA_001615015.1_ASM161501v1	-	swine7
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.11556	50.5	-	LVMK01	288	5574	5017	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376746	GCA_001615045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/045/GCA_001615045.1_ASM161504v1	-	swine8
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12745	39.6	-	FDEI01	66	2328	2090	2/6/16	3/8/17	Scaffold	SC	SAMEA2382723	GCA_900029535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/535/GCA_900029535.1_12673_7_83	-	2842STDY5753264
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74137	52.1	-	CVGB01	56	4925	4552	4/2/15	2/28/17	Scaffold	SC	SAMEA2142572	GCA_001362455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/455/GCA_001362455.1_10561_2_73	-	dtc5
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.90676	32.7	-	FHAZ01	55	3066	2885	2/10/16	3/5/17	Contig	SC	SAMEA1317434	GCA_900056965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/965/GCA_900056965.1_7414_7_86	-	st474
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.90763	32.7	-	FHCN01	56	3073	2898	2/10/16	3/5/17	Contig	SC	SAMEA1317430	GCA_900056975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/975/GCA_900056975.1_7469_7_31	-	st1878
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.02867	51.8	-	CVEQ01	71	5263	4861	4/2/15	2/28/17	Scaffold	SC	SAMEA2142687	GCA_001362495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/495/GCA_001362495.1_10540_1_64	-	ty3-191
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08912	39.6	-	FDEQ01	33	2282	2043	2/6/16	3/6/17	Scaffold	SC	SAMEA2382732	GCA_900029545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/545/GCA_900029545.1_12673_7_92	-	2842STDY5753273
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.15959	50.7	-	LVML01	252	5628	5104	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376747	GCA_001615065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/065/GCA_001615065.1_ASM161506v1	-	swine9
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.96908	50.5	-	LVMM01	486	5526	4829	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376748	GCA_001615095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/095/GCA_001615095.1_ASM161509v1	-	swine10
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08111	39.7	-	FDER01	42	2301	2049	2/6/16	3/6/17	Scaffold	SC	SAMEA2382733	GCA_900029555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/555/GCA_900029555.1_12673_7_93	-	2842STDY5753274
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81952	51.9	-	CVDO01	61	5001	4632	4/2/15	2/28/17	Scaffold	SC	SAMEA2142691	GCA_001362515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/515/GCA_001362515.1_10540_1_27	-	dn145
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82273	32.7	-	FGYA01	39	2913	2765	2/10/16	3/5/17	Contig	SC	SAMEA1464505	GCA_900057105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/105/GCA_900057105.1_7748_6_52	-	st2654
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.74334	32.7	-	FGZE01	29	2802	2656	2/10/16	3/5/17	Contig	SC	SAMEA1464254	GCA_900057285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/285/GCA_900057285.1_7564_8_31	-	st2890
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93089	51.8	-	CVCY01	68	5113	4744	4/2/15	2/28/17	Scaffold	SC	SAMEA2142723	GCA_001362535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/535/GCA_001362535.1_10540_1_10	-	dn40
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11842	39.5	-	FDHA01	46	2328	2084	2/6/16	3/13/17	Scaffold	SC	SAMEA2382794	GCA_900029565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/565/GCA_900029565.1_12718_4_59	-	2842STDY5753336
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.97091	50.6	-	LVMN01	231	5341	4869	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376749	GCA_001615115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/115/GCA_001615115.1_ASM161511v1	-	swine11
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.29392	50.5	-	LVMO01	300	5768	5144	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376750	GCA_001615125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/125/GCA_001615125.1_ASM161512v1	-	swine12
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15892	39.5	-	FDHH01	38	2406	2166	2/6/16	3/13/17	Scaffold	SC	SAMEA2382801	GCA_900029575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/575/GCA_900029575.1_12718_4_66	-	2842STDY5753343
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93038	51.8	-	CGPX01	60	5126	4751	4/21/15	2/28/17	Scaffold	SC	SAMEA2142856	GCA_001362595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/595/GCA_001362595.1_10607_1_62	-	2011-007188
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87161	32.7	-	FHAU01	63	3030	2887	2/10/16	3/5/17	Contig	SC	SAMEA1464267	GCA_900057295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/295/GCA_900057295.1_7564_8_94	-	st3304
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8301	32.7	-	FHAY01	61	2927	2775	2/10/16	3/5/17	Contig	SC	SAMEA1464351	GCA_900057305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/305/GCA_900057305.1_7554_6_85	-	st324
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72129	52	-	CGUI01	54	4885	4515	4/21/15	2/28/17	Scaffold	SC	SAMEA2143116	GCA_001362615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/615/GCA_001362615.1_10562_2_67	-	MDUST377
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11615	39.6	-	FDHM01	30	2299	2083	2/6/16	3/13/17	Scaffold	SC	SAMEA2382806	GCA_900029585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/585/GCA_900029585.1_12718_4_71	-	2842STDY5753348
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.91691	50.6	-	LVMP01	360	5336	4765	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376751	GCA_001615145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/145/GCA_001615145.1_ASM161514v1	-	swine13
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.69159	50.7	-	LVOZ01	100	5980	5549	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376813	GCA_001615175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/175/GCA_001615175.1_ASM161517v1	-	sheep4
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10175	39.6	-	FDIF01	50	2293	2041	2/6/16	3/13/17	Scaffold	SC	SAMEA2382825	GCA_900029595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/595/GCA_900029595.1_12718_4_90	-	2842STDY5753367
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93183	51.8	-	CFAF01	50	5132	4747	3/10/15	2/28/17	Scaffold	SC	SAMEA2143225	GCA_001362655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/655/GCA_001362655.1_10607_1_77	-	2011-019409
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85121	32.7	-	FHCQ01	66	2968	2812	2/10/16	3/5/17	Contig	SC	SAMEA1317483	GCA_900057315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/315/GCA_900057315.1_7469_7_52	-	st1951
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79738	32.7	-	FHCT01	58	2895	2734	2/10/16	3/6/17	Contig	SC	SAMEA1317578	GCA_900057325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/325/GCA_900057325.1_7469_7_61	-	st1993
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72278	52	-	CGNE01	54	4895	4523	4/21/15	2/28/17	Scaffold	SC	SAMEA2143235	GCA_001362675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/675/GCA_001362675.1_10562_2_83	-	MDUST414
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.18931	39.6	-	FDIL01	45	2429	2185	2/6/16	3/6/17	Scaffold	SC	SAMEA2382833	GCA_900029605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/605/GCA_900029605.1_12718_5_3	-	2842STDY5753376
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.90333	50.5	-	LVPH01	60	5115	4820	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376821	GCA_001615195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/195/GCA_001615195.1_ASM161519v1	-	sheep12
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.8075	50.5	-	LVMQ01	228	5143	4653	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376752	GCA_001615205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/205/GCA_001615205.1_ASM161520v1	-	swine14
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.19179	39.4	-	FDIR01	70	2418	2145	2/6/16	3/13/17	Scaffold	SC	SAMEA2382840	GCA_900029615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/615/GCA_900029615.1_12718_5_10	-	2842STDY5753383
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.79898	51.9	-	CVDM01	65	4964	4605	4/2/15	2/28/17	Scaffold	SC	SAMEA2143386	GCA_001362695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/695/GCA_001362695.1_10540_1_22	-	dn122
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.76669	32.6	-	FHEG01	27	2854	2714	2/10/16	3/5/17	Contig	SC	SAMEA1464343	GCA_900057335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/335/GCA_900057335.1_7748_6_74	-	st2786
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8365	32.8	-	FHER01	55	2975	2779	2/10/16	3/6/17	Contig	SC	SAMEA1464638	GCA_900057345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/345/GCA_900057345.1_7564_8_60	-	st3047
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93421	51.8	-	CVDU01	81	5153	4752	4/2/15	2/28/17	Scaffold	SC	SAMEA2143424	GCA_001362715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/715/GCA_001362715.1_10540_1_28	-	dn56
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08821	39.7	-	FDJG01	54	2305	2059	2/6/16	3/13/17	Scaffold	SC	SAMEA2382857	GCA_900029625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/625/GCA_900029625.1_12718_5_27	-	2842STDY5753400
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.14463	50.7	-	LVMR01	392	5712	5072	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376753	GCA_001615235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/235/GCA_001615235.1_ASM161523v1	-	swine15
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.99473	50.5	-	LVMS01	246	5328	4859	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376754	GCA_001615275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/275/GCA_001615275.1_ASM161527v1	-	swine16
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11424	39.5	-	FDKL01	50	2356	2080	2/6/16	3/13/17	Scaffold	SC	SAMEA2382890	GCA_900029635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/635/GCA_900029635.1_12718_5_60	-	2842STDY5753433
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7539	52	-	CGMS01	53	4927	4557	4/21/15	2/28/17	Scaffold	SC	SAMEA2143522	GCA_001362735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/735/GCA_001362735.1_10562_2_79	-	MDUST400
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78178	32.7	-	FHBE01	59	2866	2720	2/10/16	3/5/17	Contig	SC	SAMEA1317514	GCA_900057635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/635/GCA_900057635.1_7414_8_67	-	st910
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87542	32.7	-	FHEH01	42	2989	2842	2/10/16	3/5/17	Contig	SC	SAMEA1464335	GCA_900057645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/645/GCA_900057645.1_7748_6_77	-	st2793
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72202	52	-	CVAG01	58	4879	4523	4/2/15	3/3/17	Scaffold	SC	SAMEA2143527	GCA_001362755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/755/GCA_001362755.1_10426_1_10	-	dtc102
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99371	39.8	-	FDKN01	52	2193	1930	2/6/16	3/13/17	Scaffold	SC	SAMEA2382893	GCA_900029645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/645/GCA_900029645.1_12718_5_63	-	2842STDY5753436
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.90161	50.5	-	LVMT01	513	5571	4745	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376755	GCA_001615295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/295/GCA_001615295.1_ASM161529v1	-	swine17
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.98917	50.6	-	LVMU01	404	5630	4829	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376756	GCA_001615305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/305/GCA_001615305.1_ASM161530v1	-	swine18
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.18776	39.6	-	FDKU01	45	2395	2152	2/6/16	3/13/17	Scaffold	SC	SAMEA2382899	GCA_900029655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/655/GCA_900029655.1_12718_5_69	-	2842STDY5753442
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.0293	51.8	-	CVBL01	71	5256	4860	4/2/15	2/28/17	Scaffold	SC	SAMEA2143598	GCA_001362775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/775/GCA_001362775.1_10426_1_40	-	dty1-75
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86737	32.7	-	FGZZ01	45	3013	2816	2/10/16	3/5/17	Contig	SC	SAMEA1464601	GCA_900057795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/795/GCA_900057795.1_7564_8_62	-	st3056
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82693	32.7	-	FHDM01	58	2931	2782	2/10/16	3/5/17	Contig	SC	SAMEA1469650	GCA_900057805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/805/GCA_900057805.1_7480_8_55	-	st2411
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93171	51.8	-	CVAX01	66	5121	4741	4/2/15	2/28/17	Scaffold	SC	SAMEA2143653	GCA_001362795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/795/GCA_001362795.1_10426_1_28	-	dtc71
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08573	39.5	-	FDMK01	58	2313	2022	2/6/16	3/13/17	Scaffold	SC	SAMEA2382944	GCA_900029665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/665/GCA_900029665.1_12754_1_19	-	2842STDY5753488
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.17482	50.4	-	LVMV01	502	5851	5076	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376757	GCA_001615355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/355/GCA_001615355.1_ASM161535v1	-	swine19
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.13202	50.5	-	LVPC01	66	5414	5095	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376816	GCA_001615375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/375/GCA_001615375.1_ASM161537v1	-	sheep7
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07327	39.7	-	FDND01	41	2256	2017	2/6/16	3/13/17	Scaffold	SC	SAMEA2382963	GCA_900029675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/675/GCA_900029675.1_12754_1_38	-	2842STDY5753507
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.67018	52.1	-	CGLX01	57	4822	4480	4/21/15	2/28/17	Scaffold	SC	SAMEA2143657	GCA_001362815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/815/GCA_001362815.1_10492_1_69	-	MDUST364
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78899	32.7	-	FHEF01	38	2876	2727	2/10/16	3/5/17	Contig	SC	SAMEA1464589	GCA_900057815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/815/GCA_900057815.1_7748_6_69	-	st2767
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.75139	32.7	-	FGYB01	24	2849	2732	2/10/16	3/5/17	Contig	SC	SAMEA1464475	GCA_900058105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/105/GCA_900058105.1_7748_6_53	-	st2661
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93291	51.8	-	CVGK01	64	5143	4732	4/2/15	2/28/17	Scaffold	SC	SAMEA2143712	GCA_001362835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/835/GCA_001362835.1_10561_2_82	-	ty2-122
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99147	39.8	-	FDNL01	55	2194	1931	2/6/16	3/13/17	Scaffold	SC	SAMEA2382971	GCA_900029685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/685/GCA_900029685.1_12754_1_46	-	2842STDY5753515
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.72338	50.7	-	LVMW01	166	4970	4553	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376758	GCA_001615395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/395/GCA_001615395.1_ASM161539v1	-	swine20
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.61519	50.7	-	LVMX01	508	5123	4333	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376759	GCA_001615405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/405/GCA_001615405.1_ASM161540v1	-	swine21
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05192	39.5	-	FDOM01	28	2257	2026	2/6/16	3/13/17	Scaffold	SC	SAMEA2383001	GCA_900029695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/695/GCA_900029695.1_12754_1_76	-	2842STDY5753545
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93186	51.8	-	CVBP01	68	5125	4747	4/2/15	2/28/17	Scaffold	SC	SAMEA2143772	GCA_001362855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/855/GCA_001362855.1_10426_1_49	-	ct1-23
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79909	32.7	-	FHDZ01	39	2890	2747	2/10/16	3/5/17	Contig	SC	SAMEA1464524	GCA_900058115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/115/GCA_900058115.1_7748_6_42	-	st2586
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82809	32.7	-	FGZY01	33	2934	2790	2/10/16	3/6/17	Contig	SC	SAMEA1464609	GCA_900058365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/365/GCA_900058365.1_7564_8_61	-	st3049
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81837	51.9	-	CVCX01	56	5008	4634	4/2/15	2/28/17	Scaffold	SC	SAMEA2143834	GCA_001362875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/875/GCA_001362875.1_10540_1_12	-	dn126
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01433	39.8	-	FDOO01	20	2249	2007	2/6/16	3/6/17	Scaffold	SC	SAMEA2383003	GCA_900029705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/705/GCA_900029705.1_12754_1_78	-	2842STDY5753547
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.18712	50.3	-	LVMY01	592	5912	5083	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376760	GCA_001615415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/415/GCA_001615415.1_ASM161541v1	-	swine22
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.62298	50.1	-	LVMZ01	442	6192	5502	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376761	GCA_001615455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/455/GCA_001615455.1_ASM161545v1	-	swine23
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06095	39.7	-	FDOQ01	22	2276	2049	2/6/16	3/13/17	Scaffold	SC	SAMEA2383005	GCA_900029715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/715/GCA_900029715.1_12754_1_80	-	2842STDY5753549
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.02821	51.8	-	CVEZ01	67	5242	4855	4/2/15	2/28/17	Scaffold	SC	SAMEA2143873	GCA_001362895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/895/GCA_001362895.1_10540_1_70	-	ty3-194
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79355	32.7	-	FHEJ01	38	2870	2730	2/10/16	3/5/17	Contig	SC	SAMEA1464321	GCA_900058375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/375/GCA_900058375.1_7564_8_15	-	st2809
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	3.0394	32.6	-	FGZX01	92	3224	3066	2/10/16	3/5/17	Contig	SC	SAMEA1464296	GCA_900058615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/615/GCA_900058615.1_7564_8_59	-	st3046
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.78081	51.9	-	CVGD01	97	4953	4575	4/2/15	2/28/17	Scaffold	SC	SAMEA2143884	GCA_001362915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/915/GCA_001362915.1_10561_2_71	-	dtc131
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13254	39.6	-	FDPQ01	34	2356	2105	2/9/16	3/13/17	Scaffold	SC	SAMEA2383032	GCA_900029725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/725/GCA_900029725.1_12754_2_12	-	2842STDY5753577
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.57536	50.5	-	LVNA01	921	6686	5448	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376762	GCA_001615475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/475/GCA_001615475.1_ASM161547v1	-	swine24
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.83395	50.7	-	LVNB01	276	5248	4675	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376763	GCA_001615485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/485/GCA_001615485.1_ASM161548v1	-	swine25
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05887	39.5	-	FDPU01	40	2281	2040	2/9/16	3/13/17	Scaffold	SC	SAMEA2383036	GCA_900029735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/735/GCA_900029735.1_12754_2_16	-	2842STDY5753581
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72075	52	-	CGTZ01	54	4882	4515	4/21/15	2/28/17	Scaffold	SC	SAMEA2143963	GCA_001362935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/935/GCA_001362935.1_10493_1_69	-	MDUST321
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79824	32.7	-	FHBW01	41	2896	2743	2/10/16	3/6/17	Contig	SC	SAMEA1464417	GCA_900058625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/625/GCA_900058625.1_7748_6_22	-	st1515
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.91791	32.8	-	FHES01	61	3078	2897	2/10/16	3/5/17	Contig	SC	SAMEA1464545	GCA_900058635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/635/GCA_900058635.1_7564_8_51	-	st2975
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73605	52	-	CGUG01	63	4890	4534	4/21/15	2/28/17	Scaffold	SC	SAMEA2144036	GCA_001362955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/955/GCA_001362955.1_10541_2_47	-	MDUST333
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01189	39.7	-	FEGD01	26	2233	2008	2/9/16	3/13/17	Scaffold	SC	SAMEA2383058	GCA_900029745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/745/GCA_900029745.1_12754_2_38	-	2842STDY5753603
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.65817	50.4	-	LVNC01	892	6647	5523	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376764	GCA_001615535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/535/GCA_001615535.1_ASM161553v1	-	swine26
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.46492	49.9	-	LVND01	418	5872	5190	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376765	GCA_001615545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/545/GCA_001615545.1_ASM161554v1	-	swine27
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00136	39.7	-	FELB01	39	2208	1993	2/9/16	3/13/17	Scaffold	SC	SAMEA2383187	GCA_900029755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/755/GCA_900029755.1_12754_3_72	-	2842STDY5753733
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9311	51.8	-	CVFO01	70	5125	4732	4/2/15	2/28/17	Scaffold	SC	SAMEA2144700	GCA_001362995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/362/995/GCA_001362995.1_10540_1_85	-	ty2-105
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79039	32.7	-	FHBZ01	47	2882	2730	2/10/16	3/5/17	Contig	SC	SAMEA1464237	GCA_900058885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/885/GCA_900058885.1_7521_6_41	-	st1595
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86235	32.7	-	FHBY01	65	2995	2842	2/10/16	3/6/17	Contig	SC	SAMEA1464644	GCA_900058895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/895/GCA_900058895.1_7521_6_50	-	st1611
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7216	52	-	CGUE01	55	4876	4508	4/21/15	2/28/17	Scaffold	SC	SAMEA2144733	GCA_001363015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/015/GCA_001363015.1_10561_2_19	-	np11
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.97717	39.7	-	FENS01	22	2179	1942	2/9/16	3/13/17	Scaffold	SC	SAMEA2383258	GCA_900029765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/765/GCA_900029765.1_12754_4_48	-	2842STDY5753805
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.72701	50.6	-	LVNH01	182	6241	5677	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376769	GCA_001615625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/625/GCA_001615625.1_ASM161562v1	-	swine31
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.86924	50.5	-	LVNJ01	72	5109	4750	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376771	GCA_001615675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/675/GCA_001615675.1_ASM161567v1	-	swine33
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98819	39.8	-	FENY01	47	2190	1929	2/9/16	3/13/17	Scaffold	SC	SAMEA2383264	GCA_900029775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/775/GCA_900029775.1_12754_4_54	-	2842STDY5753811
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72156	52	-	CGUA01	60	4883	4519	4/21/15	2/28/17	Scaffold	SC	SAMEA2144807	GCA_001363035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/035/GCA_001363035.1_10541_2_52	-	MDUST344
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81728	32.7	-	FHEI01	50	2906	2757	2/10/16	3/5/17	Contig	SC	SAMEA1464328	GCA_900058905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/905/GCA_900058905.1_7564_8_18	-	st2819
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.78461	32.7	-	FHEN01	25	2869	2723	2/10/16	3/5/17	Contig	SC	SAMEA1464529	GCA_900058915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/915/GCA_900058915.1_8728_5_38	-	st2949
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93377	51.8	-	CVDS01	72	5140	4743	4/2/15	2/28/17	Scaffold	SC	SAMEA2144834	GCA_001363055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/055/GCA_001363055.1_10540_1_35	-	dn22
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02593	39.7	-	FEOA01	41	2219	1973	2/9/16	3/13/17	Scaffold	SC	SAMEA2674574	GCA_900029785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/785/GCA_900029785.1_14355_8_47	-	2842STDY5881834
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.83099	50.8	-	LVNK01	84	5031	4710	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376772	GCA_001615695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/695/GCA_001615695.1_ASM161569v1	-	swine34
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.84928	50.8	-	LVNL01	65	4962	4684	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376773	GCA_001615705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/705/GCA_001615705.1_ASM161570v1	-	swine35
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11758	39.5	-	FEOU01	48	2331	2076	2/9/16	3/13/17	Scaffold	SC	SAMEA2674656	GCA_900029795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/795/GCA_900029795.1_14412_3_34	-	2842STDY5881916
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81063	51.9	-	CVBJ01	43	4994	4625	4/2/15	2/28/17	Scaffold	SC	SAMEA2144943	GCA_001363075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/075/GCA_001363075.1_10426_1_60	-	dty1-58
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78913	32.7	-	FGYM01	45	2872	2727	2/10/16	3/5/17	Contig	SC	SAMEA1464703	GCA_900059245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/245/GCA_900059245.1_7748_6_70	-	st2768
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.7891	32.7	-	FHDN01	26	2877	2733	2/10/16	3/5/17	Contig	SC	SAMEA1469639	GCA_900059255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/255/GCA_900059255.1_8728_5_35	-	st2376
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81796	51.9	-	CVDI01	54	5008	4628	4/2/15	2/28/17	Scaffold	SC	SAMEA2144977	GCA_001363115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/115/GCA_001363115.1_10540_1_34	-	dn178
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11522	39.6	-	FDVH01	32	2294	2076	2/9/16	3/13/17	Scaffold	SC	SAMEA2239300	GCA_900029925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/925/GCA_900029925.1_11861_5_75	-	2842STDY5644684
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.53183	50.7	-	LVNM01	137	4715	4341	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376774	GCA_001615735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/735/GCA_001615735.1_ASM161573v1	-	swine36
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.63935	50.7	-	LVNN01	137	4866	4432	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376775	GCA_001615745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/745/GCA_001615745.1_ASM161574v1	-	swine37
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11439	39.6	-	FDVO01	50	2307	2058	2/9/16	3/5/17	Scaffold	SC	SAMEA2238284	GCA_900029935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/935/GCA_900029935.1_11860_4_9	-	2842STDY5643653
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7406	52.1	-	CGMV01	63	4918	4543	4/21/15	2/28/17	Scaffold	SC	SAMEA2145076	GCA_001363135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/135/GCA_001363135.1_10562_2_33	-	MDUST251
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77897	32.7	-	FHDP01	56	2880	2730	2/10/16	3/5/17	Contig	SC	SAMEA1469625	GCA_900059265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/265/GCA_900059265.1_7480_8_64	-	st2443
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81679	32.7	-	FIZB01	27	2920	2793	2/12/16	3/5/17	Contig	SC	SAMEA1464230	GCA_900059555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/555/GCA_900059555.1_7521_5_27	-	st1028
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.92664	51.8	-	CVDR01	71	5118	4731	4/2/15	2/28/17	Scaffold	SC	SAMEA2145144	GCA_001363155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/155/GCA_001363155.1_10540_1_29	-	dtc115
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98192	39.8	-	FEAV01	21	2201	1964	2/9/16	3/8/17	Scaffold	SC	SAMEA2238515	GCA_900029945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/945/GCA_900029945.1_11860_6_50	-	2842STDY5643886
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.38653	50.5	-	LVNP01	116	5711	5319	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376777	GCA_001615785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/785/GCA_001615785.1_ASM161578v1	-	swine39
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.19412	50.6	-	LVNQ01	109	5438	5065	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376778	GCA_001615805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/805/GCA_001615805.1_ASM161580v1	-	swine40
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.97986	39.7	-	FECO01	30	2185	1953	2/9/16	3/6/17	Scaffold	SC	SAMEA2238590	GCA_900029955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/955/GCA_900029955.1_11861_1_27	-	2842STDY5643962
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93053	51.8	-	CVCR01	66	5120	4739	4/2/15	2/28/17	Scaffold	SC	SAMEA2145196	GCA_001363175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/175/GCA_001363175.1_10426_1_95	-	ty2-104
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.90691	32.7	-	FHBU01	71	3021	2862	2/10/16	3/5/17	Contig	SC	SAMEA1464432	GCA_900059615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/615/GCA_900059615.1_7521_5_88	-	st1458
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.89749	32.7	-	FGYR01	47	3050	2857	2/10/16	3/6/17	Contig	SC	SAMEA1464366	GCA_900059805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/805/GCA_900059805.1_7748_6_76	-	st2788
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81954	51.9	-	CVBS01	60	5000	4623	4/2/15	2/28/17	Scaffold	SC	SAMEA2145217	GCA_001363195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/195/GCA_001363195.1_10426_1_59	-	dty1-91
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01449	39.8	-	FCPK01	21	2245	2003	2/6/16	3/13/17	Scaffold	SC	SAMEA2238722	GCA_900029965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/965/GCA_900029965.1_11861_2_62	-	2842STDY5644095
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.79336	50.6	-	LVNW01	96	5034	4658	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376784	GCA_001615915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/915/GCA_001615915.1_ASM161591v1	-	swine46
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.91135	50.4	-	LVNX01	196	6480	5900	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376785	GCA_001615925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/925/GCA_001615925.1_ASM161592v1	-	swine47
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0719	39.6	-	FEFR01	27	2314	2063	2/9/16	3/13/17	Scaffold	SC	SAMEA2238751	GCA_900029975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/975/GCA_900029975.1_12273_1_86	-	2842STDY5644124
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72058	52	-	CVBM01	54	4883	4520	4/2/15	2/28/17	Scaffold	SC	SAMEA2145226	GCA_001363215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/215/GCA_001363215.1_10426_1_52	-	ty3-212
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83076	32.7	-	FHAM01	49	2920	2772	2/10/16	3/6/17	Contig	SC	SAMEA1464372	GCA_900059815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/815/GCA_900059815.1_7564_8_82	-	st3222
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83806	32.7	-	FHAV01	70	2940	2791	2/10/16	3/5/17	Contig	SC	SAMEA1317437	GCA_900060035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/035/GCA_900060035.1_7414_7_25	-	st68
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73031	52	-	CEYG01	45	4878	4510	3/9/15	2/28/17	Scaffold	SC	SAMEA2145334	GCA_001363235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/235/GCA_001363235.1_10561_2_3	-	np94
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05338	39.6	-	FCQU01	35	2268	2022	2/6/16	3/13/17	Scaffold	SC	SAMEA2239062	GCA_900029985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/985/GCA_900029985.1_11860_7_21	-	2842STDY5644442
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.71029	50.9	-	LVNY01	142	4986	4574	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376786	GCA_001615975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/615/975/GCA_001615975.1_ASM161597v1	-	swine48
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.03745	50.6	-	LVOB01	120	5289	4918	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376789	GCA_001616015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/015/GCA_001616015.1_ASM161601v1	-	swine51
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06758	39.6	-	FCVA01	35	2266	2031	2/6/16	3/13/17	Scaffold	SC	SAMEA2382556	GCA_900029995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/995/GCA_900029995.1_12673_6_11	-	2842STDY5753096
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81825	51.9	-	CGPR01	46	5014	4643	4/21/15	2/28/17	Scaffold	SC	SAMEA2145566	GCA_001363255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/255/GCA_001363255.1_10607_1_45	-	2008-010439
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.88546	32.7	-	FHAE01	57	3008	2845	2/10/16	3/5/17	Contig	SC	SAMEA1464520	GCA_900060215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/215/GCA_900060215.1_7564_8_68	-	st3113
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82207	32.7	-	FHEB01	43	2941	2755	2/10/16	3/5/17	Contig	SC	SAMEA1464536	GCA_900060225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/225/GCA_900060225.1_7748_6_51	-	st2649
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72165	52	-	CVAW01	45	4884	4509	4/2/15	2/28/17	Scaffold	SC	SAMEA2145630	GCA_001363275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/275/GCA_001363275.1_10426_1_31	-	dn28
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08758	39.6	-	FCUZ01	28	2278	2048	2/6/16	3/13/17	Scaffold	SC	SAMEA2238865	GCA_900030005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/005/GCA_900030005.1_11861_3_11	-	2842STDY5644240
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.54731	50.8	-	LVOD01	125	4792	4373	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376791	GCA_001616035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/035/GCA_001616035.1_ASM161603v1	-	swine53
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.20652	50.4	-	LVOA01	116	5490	5031	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376788	GCA_001616045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/045/GCA_001616045.1_ASM161604v1	-	swine50
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02096	39.7	-	FCVK01	28	2231	2014	2/6/16	3/13/17	Scaffold	SC	SAMEA2238878	GCA_900030015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/015/GCA_900030015.1_11861_3_24	-	2842STDY5644253
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.02863	51.8	-	CVEJ01	73	5248	4854	4/2/15	2/28/17	Scaffold	SC	SAMEA2145664	GCA_001363295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/295/GCA_001363295.1_10540_1_54	-	ipt51
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82347	32.7	-	FGYZ01	68	2943	2762	2/10/16	3/5/17	Contig	SC	SAMEA1464650	GCA_900060465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/465/GCA_900060465.1_7564_8_20	-	st2825
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8333	32.7	-	FHAW01	52	2960	2783	2/10/16	3/5/17	Contig	SC	SAMEA1464667	GCA_900060475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/475/GCA_900060475.1_7554_6_6	-	st113
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72956	52.1	-	CVBE01	53	4910	4542	4/2/15	2/28/17	Scaffold	SC	SAMEA2145685	GCA_001363315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/315/GCA_001363315.1_10426_1_43	-	as16
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08804	39.6	-	FCVP01	31	2317	2083	2/6/16	3/13/17	Scaffold	SC	SAMEA2238885	GCA_900030025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/025/GCA_900030025.1_11861_3_32	-	2842STDY5644260
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.74455	50.6	-	LVOC01	94	4959	4621	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376790	GCA_001616055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/055/GCA_001616055.1_ASM161605v1	-	swine52
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.44789	50.4	-	LVOE01	250	5979	5405	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376792	GCA_001616095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/095/GCA_001616095.1_ASM161609v1	-	swine54
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05121	39.5	-	FCXC01	33	2267	2026	2/6/16	3/13/17	Scaffold	SC	SAMEA2382576	GCA_900030035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/035/GCA_900030035.1_12673_6_31	-	2842STDY5753116
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93259	51.8	-	CVDH01	69	5130	4747	4/2/15	2/28/17	Scaffold	SC	SAMEA2145770	GCA_001363335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/335/GCA_001363335.1_10540_1_19	-	dn182
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81715	32.7	-	FHAX01	56	2908	2760	2/10/16	3/5/17	Contig	SC	SAMEA1464652	GCA_900060485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/485/GCA_900060485.1_7554_6_60	-	st257
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.75199	32.7	-	FHCP01	52	2817	2668	2/10/16	3/5/17	Contig	SC	SAMEA1317511	GCA_900060495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/495/GCA_900060495.1_7469_7_43	-	st1925
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.8801	52	-	CVLM01	116	5082	4656	4/9/15	2/28/17	Scaffold	SC	SAMEA2145782	GCA_001363355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/355/GCA_001363355.1_10562_2_15	-	MDUST171
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0528	39.8	-	FCXJ01	28	2311	2069	2/6/16	3/13/17	Scaffold	SC	SAMEA2382581	GCA_900030045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/045/GCA_900030045.1_12673_6_36	-	2842STDY5753121
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.83777	50.7	-	LVOJ01	40	4950	4664	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376797	GCA_001616205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/205/GCA_001616205.1_ASM161620v1	-	swine59
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.14055	50.3	-	LVOP01	66	5232	4941	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376803	GCA_001616305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/305/GCA_001616305.1_ASM161630v1	-	swine65
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15451	39.6	-	FCYS01	47	2368	2129	2/6/16	3/13/17	Scaffold	SC	SAMEA2674578	GCA_900030055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/055/GCA_900030055.1_14355_8_51	-	2842STDY5881838
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93263	51.8	-	CGQT01	56	5123	4739	4/21/15	2/28/17	Scaffold	SC	SAMEA2145931	GCA_001363375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/375/GCA_001363375.1_10608_2_18	-	01-2011-000664
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86927	32.7	-	FHAF01	50	2980	2829	2/10/16	3/6/17	Contig	SC	SAMEA1464539	GCA_900060805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/805/GCA_900060805.1_7564_8_71	-	st3129
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77912	32.7	-	FGZH01	38	2865	2724	2/10/16	3/5/17	Contig	SC	SAMEA1464541	GCA_900061095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/095/GCA_900061095.1_7564_8_34	-	st2901
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72068	52	-	CEYY01	46	4879	4521	3/12/15	2/28/17	Scaffold	SC	SAMEA2145951	GCA_001363395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/395/GCA_001363395.1_10541_2_3	-	MDUST114
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.029	39.6	-	FCZX01	49	2221	1990	2/6/16	3/13/17	Scaffold	SC	SAMEA2382606	GCA_900030065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/065/GCA_900030065.1_12673_6_61	-	2842STDY5753146
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.47794	50.3	-	LVOR01	232	6025	5460	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376805	GCA_001616345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/345/GCA_001616345.1_ASM161634v1	-	swine67
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.94944	50.8	-	LVPO01	51	5123	4834	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376828	GCA_001616515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/515/GCA_001616515.1_ASM161651v1	-	sheep19
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.14225	39.6	-	FDAA01	48	2329	2102	2/6/16	3/13/17	Scaffold	SC	SAMEA2382610	GCA_900030075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/075/GCA_900030075.1_12673_6_65	-	2842STDY5753150
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93208	51.8	-	CVGG01	71	5136	4750	4/2/15	2/28/17	Scaffold	SC	SAMEA2146003	GCA_001363415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/415/GCA_001363415.1_10561_2_76	-	ct1-13
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.73776	32.7	-	FHDS01	48	2805	2668	2/10/16	3/5/17	Contig	SC	SAMEA1469578	GCA_900061115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/115/GCA_900061115.1_7480_8_73	-	st2474
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77948	32.7	-	FHDT01	54	2855	2710	2/10/16	3/5/17	Contig	SC	SAMEA1469582	GCA_900061125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/125/GCA_900061125.1_7480_8_76	-	st2481
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93278	51.8	-	CGPN01	52	5146	4746	4/21/15	2/28/17	Scaffold	SC	SAMEA2146042	GCA_001363435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/435/GCA_001363435.1_10607_1_73	-	2011-015914
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09043	39.6	-	FCZY01	37	2290	2048	2/6/16	3/6/17	Scaffold	SC	SAMEA2382608	GCA_900030085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/085/GCA_900030085.1_12673_6_63	-	2842STDY5753148
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.82133	50.7	-	LVPP01	68	4995	4698	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376829	GCA_001616535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/535/GCA_001616535.1_ASM161653v1	-	sheep20
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.0969	50.6	-	LVPT01	69	5306	4959	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376833	GCA_001616615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/615/GCA_001616615.1_ASM161661v1	-	sheep24
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06936	39.5	-	FDAE01	31	2247	2020	2/6/16	3/13/17	Scaffold	SC	SAMEA2382613	GCA_900030095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/095/GCA_900030095.1_12673_6_68	-	2842STDY5753153
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.03748	51.8	-	CVCA01	67	5270	4867	4/2/15	2/28/17	Scaffold	SC	SAMEA2146129	GCA_001363455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/455/GCA_001363455.1_10426_1_69	-	ty2-17
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86785	32.7	-	FGZP01	49	2980	2826	2/10/16	3/5/17	Contig	SC	SAMEA1464633	GCA_900061735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/735/GCA_900061735.1_7564_8_47	-	st2953
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82901	32.7	-	FHBA01	49	2924	2773	2/10/16	3/6/17	Contig	SC	SAMEA1464329	GCA_900061985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/985/GCA_900061985.1_7712_8_19	-	st684
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9309	51.8	-	CVFQ01	70	5127	4747	4/2/15	2/28/17	Scaffold	SC	SAMEA2146319	GCA_001363495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/495/GCA_001363495.1_10540_1_94	-	ty2-154
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99126	39.8	-	FDAV01	48	2206	1936	2/6/16	3/13/17	Scaffold	SC	SAMEA2382632	GCA_900030105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/105/GCA_900030105.1_12673_6_87	-	2842STDY5753172
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.28064	50.5	-	LVPV01	80	5453	5135	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376835	GCA_001616655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/655/GCA_001616655.1_ASM161665v1	-	sheep26
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.63012	50.9	-	LVPY01	66	4842	4513	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376838	GCA_001616715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/715/GCA_001616715.1_ASM161671v1	-	sheep29
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06336	39.6	-	FDBF01	22	2262	2045	2/6/16	3/5/17	Scaffold	SC	SAMEA2382642	GCA_900030115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/115/GCA_900030115.1_12673_7_2	-	2842STDY5753183
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69921	52.1	-	CGLR01	57	4869	4503	4/21/15	2/28/17	Scaffold	SC	SAMEA2146350	GCA_001363515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/515/GCA_001363515.1_10493_1_16	-	MDUST150
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.73766	32.7	-	FHAD01	44	2798	2653	2/10/16	3/5/17	Contig	SC	SAMEA1464533	GCA_900062125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/125/GCA_900062125.1_7564_8_70	-	st3125
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83507	32.7	-	FHCF01	60	2934	2779	2/10/16	3/5/17	Contig	SC	SAMEA1464596	GCA_900062135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/135/GCA_900062135.1_7521_6_92	-	st1740
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.59161	52.1	-	CVFW01	54	4720	4362	4/2/15	2/28/17	Scaffold	SC	SAMEA2146436	GCA_001363535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/535/GCA_001363535.1_10561_2_47	-	SGB113
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02217	39.8	-	FDBX01	27	2257	2019	2/6/16	3/13/17	Scaffold	SC	SAMEA2382660	GCA_900030125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/125/GCA_900030125.1_12673_7_20	-	2842STDY5753201
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.4341	50.5	-	LVQA01	85	5743	5365	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376840	GCA_001616755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/755/GCA_001616755.1_ASM161675v1	-	sheep31
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.89801	50.7	-	LVQC01	102	5183	4808	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376842	GCA_001616785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/785/GCA_001616785.1_ASM161678v1	-	sheep33
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12158	39.7	-	FDEA01	51	2374	2119	2/6/16	3/13/17	Scaffold	SC	SAMEA2382715	GCA_900030135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/135/GCA_900030135.1_12673_7_75	-	2842STDY5753256
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.06163	51.8	-	CVCP01	96	5280	4882	4/2/15	2/28/17	Scaffold	SC	SAMEA2146461	GCA_001363575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/575/GCA_001363575.1_10426_1_88	-	ty2-153
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85324	32.7	-	FHCR01	100	2990	2833	2/10/16	3/5/17	Contig	SC	SAMEA1317472	GCA_900062145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/145/GCA_900062145.1_7469_7_49	-	st1936
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.83014	32.7	-	FHBD01	30	2921	2777	2/10/16	3/5/17	Contig	SC	SAMEA1464336	GCA_900062765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/765/GCA_900062765.1_8728_5_25	-	st759
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.83334	52	-	CIJP01	73	5035	4643	4/21/15	2/28/17	Scaffold	SC	SAMEA2146473	GCA_001363595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/595/GCA_001363595.1_10492_1_30	-	MDUST211
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04068	39.7	-	FDEF01	32	2249	2027	2/6/16	3/13/17	Scaffold	SC	SAMEA2382721	GCA_900030145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/145/GCA_900030145.1_12673_7_81	-	2842STDY5753262
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.75166	50.6	-	LVQH01	106	4961	4550	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376847	GCA_001616895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/895/GCA_001616895.1_ASM161689v1	-	sheep38
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.60933	50.6	-	LVQI01	90	4790	4410	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376848	GCA_001616905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/905/GCA_001616905.1_ASM161690v1	-	sheep39
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05329	39.7	-	FDEL01	42	2281	2046	2/6/16	3/13/17	Scaffold	SC	SAMEA2382727	GCA_900030155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/155/GCA_900030155.1_12673_7_87	-	2842STDY5753268
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.02827	51.8	-	CVEO01	72	5246	4852	4/2/15	2/28/17	Scaffold	SC	SAMEA2146504	GCA_001363615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/615/GCA_001363615.1_10540_1_60	-	ty3-254
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83168	32.7	-	FHBO01	68	2930	2780	2/10/16	3/5/17	Contig	SC	SAMEA1469570	GCA_900062775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/775/GCA_900062775.1_7480_7_67	-	st1289
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85785	32.7	-	FHCH01	76	3002	2827	2/10/16	3/5/17	Contig	SC	SAMEA1317473	GCA_900062785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/785/GCA_900062785.1_7469_7_9	-	st1781
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73657	52	-	CGML01	59	4900	4544	4/21/15	2/28/17	Scaffold	SC	SAMEA2146644	GCA_001363635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/635/GCA_001363635.1_10562_2_43	-	MDUST275
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00324	39.7	-	FDFJ01	39	2206	1993	2/6/16	3/13/17	Scaffold	SC	SAMEA2382751	GCA_900030165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/165/GCA_900030165.1_12718_4_16	-	2842STDY5753293
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.80814	50.8	-	LVQL01	54	4931	4670	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376851	GCA_001616955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/616/955/GCA_001616955.1_ASM161695v1	-	sheep42
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.93272	50.6	-	LVQW01	60	5147	4844	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376862	GCA_001617195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/195/GCA_001617195.1_ASM161719v1	-	sheep53
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06621	39.6	-	FDFM01	30	2271	2040	2/6/16	3/12/17	Scaffold	SC	SAMEA2382754	GCA_900030175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/175/GCA_900030175.1_12718_4_19	-	2842STDY5753296
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9264	51.9	-	CVAO01	70	5137	4742	4/2/15	2/28/17	Scaffold	SC	SAMEA2146652	GCA_001363655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/655/GCA_001363655.1_10426_1_19	-	dn10
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83214	32.7	-	FHCO01	69	2964	2790	2/10/16	3/5/17	Contig	SC	SAMEA1317391	GCA_900062795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/795/GCA_900062795.1_7469_7_40	-	st1913
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84053	32.7	-	FHCX01	90	2960	2787	2/10/16	3/5/17	Contig	SC	SAMEA1317408	GCA_900062885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/885/GCA_900062885.1_7469_7_75	-	st2076
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72136	52	-	CGMI01	60	4883	4525	4/21/15	2/28/17	Scaffold	SC	SAMEA2146657	GCA_001363675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/675/GCA_001363675.1_10541_2_38	-	MDUST316
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06156	39.7	-	FDFK01	20	2272	2047	2/6/16	3/13/17	Scaffold	SC	SAMEA2382752	GCA_900030185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/185/GCA_900030185.1_12718_4_17	-	2842STDY5753294
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.89264	50.5	-	LVQY01	223	5240	4748	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376864	GCA_001617225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/225/GCA_001617225.1_ASM161722v1	-	sheep55
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	4.84876	50.5	-	LVQZ01	191	5134	4693	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376865	GCA_001617255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/255/GCA_001617255.1_ASM161725v1	-	sheep56
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98317	39.7	-	FDGO01	20	2182	1959	2/6/16	3/13/17	Scaffold	SC	SAMEA2382782	GCA_900030195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/195/GCA_900030195.1_12718_4_47	-	2842STDY5753324
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.68597	52.1	-	CHLS01	58	4856	4488	4/21/15	2/28/17	Scaffold	SC	SAMEA2146674	GCA_001363695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/695/GCA_001363695.1_10561_2_35	-	3653/3
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86498	32.7	-	FHEA01	64	2993	2835	2/10/16	3/6/17	Contig	SC	SAMEA1464544	GCA_900062895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/895/GCA_900062895.1_7748_6_48	-	st2632
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.93441	32.6	-	FHEK01	79	3061	2888	2/10/16	3/5/17	Contig	SC	SAMEA1464574	GCA_900062905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/905/GCA_900062905.1_7564_8_33	-	st2898
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.02926	51.8	-	CVEF01	72	5262	4861	4/2/15	2/28/17	Scaffold	SC	SAMEA2146797	GCA_001363715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/715/GCA_001363715.1_10540_1_49	-	ty3-202
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04278	39.6	-	FDGX01	29	2237	2003	2/6/16	3/13/17	Scaffold	SC	SAMEA2382792	GCA_900030205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/205/GCA_900030205.1_12718_4_57	-	2842STDY5753334
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	5.15484	50.6	-	LVRA01	311	5664	5084	4/8/16	2/25/17	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376866	GCA_001617265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/617/265/GCA_001617265.1_ASM161726v1	-	sheep57
Escherichia coli	562	PRJNA315494	315494	Proteobacteria	Gammaproteobacteria	4.92582	50.6	-	LWDC01	97	5142	4742	5/7/16	2/25/17	Scaffold	ICAR-National Institute of Veterinary Epidemiology and Disease Informatics	SAMN04563539	GCA_001640145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/640/145/GCA_001640145.1_ASM164014v1	-	SCM-21
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01976	39.7	-	FDIK01	23	2226	2002	2/6/16	3/6/17	Scaffold	SC	SAMEA2382832	GCA_900030215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/215/GCA_900030215.1_12718_5_2	-	2842STDY5753375
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81828	51.9	-	CVCN01	57	5010	4632	4/2/15	2/28/17	Scaffold	SC	SAMEA2146882	GCA_001363735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/735/GCA_001363735.1_10426_1_85	-	ty2-150
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8476	32.7	-	FGZI01	37	2956	2808	2/10/16	3/5/17	Contig	SC	SAMEA1464532	GCA_900063305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/305/GCA_900063305.1_7564_8_35	-	st2908
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.76809	32.7	-	FGZO01	29	2865	2693	2/10/16	3/5/17	Contig	SC	SAMEA1464663	GCA_900063315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/315/GCA_900063315.1_8728_5_39	-	st2952
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71596	52.1	-	CVGO01	64	4884	4519	4/2/15	2/28/17	Scaffold	SC	SAMEA2146935	GCA_001363755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/755/GCA_001363755.1_10561_2_90	-	ty2-69
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02258	39.7	-	FDIZ01	44	2214	1964	2/6/16	3/13/17	Scaffold	SC	SAMEA2382848	GCA_900030225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/225/GCA_900030225.1_12718_5_18	-	2842STDY5753391
Escherichia coli	562	PRJNA315486	315486	Proteobacteria	Gammaproteobacteria	4.766	50.7	-	LUYD01	59	4943	4585	5/20/16	2/25/17	Scaffold	ICAR-National Institute of Veterinary Epidemiology and Disease Informatics	SAMN04562599	GCA_001648915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/648/915/GCA_001648915.1_ASM164891v1	-	NIVEDI-P44
Escherichia coli	562	PRJNA266030	266030	Proteobacteria	Gammaproteobacteria	5.22192	50.4	-	JSVO01	169	5375	5038	5/25/16	2/25/17	Scaffold	"Shanghai Majorbio Bio-pharm Technology Co.,Ltd"	SAMN03154702	GCA_001651615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/615/GCA_001651615.1_ASM165161v1	27199951	UPEC_004
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99267	39.8	-	FDJI01	44	2193	1931	2/6/16	3/13/17	Scaffold	SC	SAMEA2382860	GCA_900030235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/235/GCA_900030235.1_12718_5_30	-	2842STDY5753403
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.02885	51.8	-	CVAS01	68	5250	4860	4/2/15	2/28/17	Scaffold	SC	SAMEA2147001	GCA_001363775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/775/GCA_001363775.1_10426_1_23	-	dtc138
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78551	32.7	-	FHAP01	58	2880	2723	2/10/16	3/5/17	Contig	SC	SAMEA1464456	GCA_900063325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/325/GCA_900063325.1_7564_8_88	-	st3263
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.96699	32.7	-	FHEM01	66	3137	2930	2/10/16	3/5/17	Contig	SC	SAMEA1464587	GCA_900063345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/345/GCA_900063345.1_7564_8_36	-	st2910
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93192	51.8	-	CVGM01	72	5126	4744	4/2/15	2/28/17	Scaffold	SC	SAMEA2147029	GCA_001363795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/795/GCA_001363795.1_10561_2_86	-	ty2-124
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99326	39.8	-	FDLB01	43	2184	1936	2/6/16	3/13/17	Scaffold	SC	SAMEA2382906	GCA_900030245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/245/GCA_900030245.1_12718_5_76	-	2842STDY5753449
Escherichia coli	562	PRJNA266030	266030	Proteobacteria	Gammaproteobacteria	5.15144	50.2	-	JSVN01	173	5319	4965	5/25/16	2/25/17	Scaffold	"Shanghai Majorbio Bio-pharm Technology Co.,Ltd"	SAMN03154705	GCA_001651625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/625/GCA_001651625.1_ASM165162v1	27199951	UPEC_008
Escherichia coli	562	PRJNA266030	266030	Proteobacteria	Gammaproteobacteria	4.84981	50.6	-	JSVM01	71	4943	4668	5/25/16	2/25/17	Scaffold	"Shanghai Majorbio Bio-pharm Technology Co.,Ltd"	SAMN03154703	GCA_001651635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/635/GCA_001651635.1_ASM165163v1	27199951	UPEC_005
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00483	39.7	-	FDLJ01	20	2183	1962	2/6/16	3/13/17	Scaffold	SC	SAMEA2382914	GCA_900030255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/255/GCA_900030255.1_12718_5_84	-	2842STDY5753457
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93138	51.8	-	CVAK01	70	5115	4739	4/2/15	2/28/17	Scaffold	SC	SAMEA2147143	GCA_001363855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/855/GCA_001363855.1_10426_1_14	-	dn15
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87472	32.7	-	FGZJ01	76	2996	2840	2/10/16	3/6/17	Contig	SC	SAMEA1464521	GCA_900063945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/945/GCA_900063945.1_7564_8_37	-	st2917
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85871	32.7	-	FGZN01	52	2970	2820	2/10/16	3/6/17	Contig	SC	SAMEA1464608	GCA_900063955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/955/GCA_900063955.1_7564_8_44	-	st2935
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72205	52	-	CVFC01	57	4868	4510	4/2/15	2/28/17	Scaffold	SC	SAMEA2147217	GCA_001363875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/875/GCA_001363875.1_10540_1_76	-	ty3-197
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99485	39.8	-	FDLP01	46	2199	1935	2/6/16	3/13/17	Scaffold	SC	SAMEA2382920	GCA_900030265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/265/GCA_900030265.1_12718_5_90	-	2842STDY5753463
Escherichia coli	562	PRJNA266030	266030	Proteobacteria	Gammaproteobacteria	5.02297	50.5	-	JSVL01	147	5207	4892	5/25/16	2/25/17	Scaffold	"Shanghai Majorbio Bio-pharm Technology Co.,Ltd"	SAMN03154704	GCA_001651685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/685/GCA_001651685.1_ASM165168v1	27199951	UPEC_007
Escherichia coli	562	PRJNA266030	266030	Proteobacteria	Gammaproteobacteria	4.68187	50.8	-	JSVQ01	135	4777	4507	5/25/16	2/25/17	Scaffold	"Shanghai Majorbio Bio-pharm Technology Co.,Ltd"	SAMN03154707	GCA_001651695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/695/GCA_001651695.1_ASM165169v1	27199951	UPEC_014
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02655	39.6	-	FDNN01	26	2228	2005	2/6/16	3/5/17	Scaffold	SC	SAMEA2382973	GCA_900030275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/275/GCA_900030275.1_12754_1_48	-	2842STDY5753517
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93252	51.8	-	CVFH01	69	5117	4749	4/2/15	2/28/17	Scaffold	SC	SAMEA2147256	GCA_001363895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/895/GCA_001363895.1_10540_1_78	-	ct1-69
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.75914	32.7	-	FHBV01	41	2823	2675	2/10/16	3/5/17	Contig	SC	SAMEA1464427	GCA_900064045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/045/GCA_900064045.1_7521_6_2	-	st1474
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.94998	32.7	-	FGYN01	64	3119	2970	2/10/16	3/5/17	Contig	SC	SAMEA1464692	GCA_900064215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/215/GCA_900064215.1_7748_6_71	-	st2773
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73487	52	-	CFAB01	57	4893	4538	3/10/15	2/28/17	Scaffold	SC	SAMEA2147267	GCA_001363915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/915/GCA_001363915.1_10562_2_49	-	MDUST338
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08903	39.6	-	FDNT01	51	2294	2043	2/6/16	3/13/17	Scaffold	SC	SAMEA2382981	GCA_900030285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/285/GCA_900030285.1_12754_1_56	-	2842STDY5753525
Escherichia coli	562	PRJNA266030	266030	Proteobacteria	Gammaproteobacteria	5.272	50.4	-	JSVR01	199	5486	5120	5/25/16	2/25/17	Scaffold	"Shanghai Majorbio Bio-pharm Technology Co.,Ltd"	SAMN03154700	GCA_001651715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/715/GCA_001651715.1_ASM165171v1	27199951	UPEC_001
Escherichia coli	562	PRJNA266030	266030	Proteobacteria	Gammaproteobacteria	5.07351	50.4	-	JSVK01	139	5197	4863	5/25/16	2/25/17	Scaffold	"Shanghai Majorbio Bio-pharm Technology Co.,Ltd"	SAMN03154706	GCA_001651725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/651/725/GCA_001651725.1_ASM165172v1	27199951	UPEC_011
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98596	39.8	-	FDNU01	57	2198	1932	2/6/16	3/15/17	Scaffold	SC	SAMEA2382982	GCA_900030295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/295/GCA_900030295.1_12754_1_57	-	2842STDY5753526
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73205	52	-	CVFK01	61	4899	4534	4/2/15	2/28/17	Scaffold	SC	SAMEA2147279	GCA_001363935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/935/GCA_001363935.1_10540_1_86	-	ty2-138
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81228	32.7	-	FGYO01	24	2910	2769	2/10/16	3/5/17	Contig	SC	SAMEA1464341	GCA_900064225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/225/GCA_900064225.1_7748_6_72	-	st2784
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83374	32.7	-	FGZB01	57	2920	2777	2/10/16	3/5/17	Contig	SC	SAMEA1464281	GCA_900064235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/235/GCA_900064235.1_7564_8_25	-	st2878
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72186	52	-	CVBB01	52	4875	4518	4/2/15	2/28/17	Scaffold	SC	SAMEA2147306	GCA_001363955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/955/GCA_001363955.1_10426_1_38	-	ct1-45
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07077	39.7	-	FDOE01	46	2261	2010	2/6/16	3/13/17	Scaffold	SC	SAMEA2382992	GCA_900030305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/305/GCA_900030305.1_12754_1_67	-	2842STDY5753536
Escherichia coli	562	PRJNA316969	316969	Proteobacteria	Gammaproteobacteria	5.0274	50.6974	plasmid pE78.1:NZ_CM004373.1/CM004373.1; plasmid pE78.2:NZ_CM004374.1/CM004374.1	LXQH01	62	5207	4837	5/17/16	2/25/17	Scaffold	Loyola University Chicago	SAMN04622947	GCA_001652805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/805/GCA_001652805.1_ASM165280v1	-	E-78
Escherichia coli	562	PRJNA311932	311932	Proteobacteria	Gammaproteobacteria	5.05762	50.4	-	LSUT01	107	5275	4942	5/31/16	2/25/17	Scaffold	National Institute of Health Dr Ricardo Jorge	SAMN04497991	GCA_001653535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/535/GCA_001653535.1_ASM165353v1	-	INSali38
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0501	39.6	-	FDOZ01	31	2243	2011	2/9/16	3/5/17	Scaffold	SC	SAMEA2383014	GCA_900030315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/315/GCA_900030315.1_12754_1_89	-	2842STDY5753558
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93274	51.8	-	CVDA01	69	5131	4734	4/2/15	2/28/17	Scaffold	SC	SAMEA2147396	GCA_001363975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/363/975/GCA_001363975.1_10540_1_16	-	dn152
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.89269	32.7	-	FHDF01	83	3027	2870	2/10/16	3/5/17	Contig	SC	SAMEA1469716	GCA_900064245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/245/GCA_900064245.1_7480_8_16	-	st2215
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85643	32.7	-	FHDD01	73	2975	2821	2/10/16	3/6/17	Contig	SC	SAMEA1469601	GCA_900064445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/445/GCA_900064445.1_7480_8_7	-	st2197
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93366	51.8	-	CVBD01	68	5140	4742	4/2/15	2/28/17	Scaffold	SC	SAMEA2147612	GCA_001364015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/015/GCA_001364015.1_10426_1_35	-	ty2-160
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10875	39.6	-	FDPW01	28	2307	2090	2/9/16	3/13/17	Scaffold	SC	SAMEA2383038	GCA_900030325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/325/GCA_900030325.1_12754_2_18	-	2842STDY5753583
Escherichia coli	562	PRJNA311932	311932	Proteobacteria	Gammaproteobacteria	4.74319	50.8	-	LSUY01	110	4889	4625	5/31/16	2/25/17	Scaffold	National Institute of Health Dr Ricardo Jorge	SAMN04497996	GCA_001653555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/555/GCA_001653555.1_ASM165355v1	-	INSali370
Escherichia coli	562	PRJNA311932	311932	Proteobacteria	Gammaproteobacteria	4.90545	50.7	-	LSUU01	87	5054	4794	5/31/16	2/25/17	Scaffold	National Institute of Health Dr Ricardo Jorge	SAMN04497992	GCA_001653635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/635/GCA_001653635.1_ASM165363v1	-	INSali92
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11402	39.6	-	FDQA01	37	2334	2090	2/9/16	3/12/17	Scaffold	SC	SAMEA2383042	GCA_900030335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/335/GCA_900030335.1_12754_2_22	-	2842STDY5753587
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69611	52.1	-	CGQH01	48	4857	4511	4/21/15	2/28/17	Scaffold	SC	SAMEA2147615	GCA_001364035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/035/GCA_001364035.1_10607_2_28	-	D55055
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82697	32.7	-	FHDU01	63	2924	2772	2/10/16	3/5/17	Contig	SC	SAMEA1469542	GCA_900064455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/455/GCA_900064455.1_7480_8_82	-	st2506
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84581	32.7	-	FGYF01	32	2955	2809	2/10/16	3/5/17	Contig	SC	SAMEA1464471	GCA_900064505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/505/GCA_900064505.1_7748_6_56	-	st2675
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73922	52.1	-	CVFI01	68	4935	4563	4/2/15	2/28/17	Scaffold	SC	SAMEA2147639	GCA_001364055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/055/GCA_001364055.1_10540_1_83	-	ty3-199
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0898	39.6	-	FDQD01	67	2307	2028	2/9/16	3/13/17	Scaffold	SC	SAMEA2383045	GCA_900030345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/345/GCA_900030345.1_12754_2_25	-	2842STDY5753590
Escherichia coli	562	PRJNA316969	316969	Proteobacteria	Gammaproteobacteria	5.03233	51	-	LXGO01	463	5146	4770	6/4/16	2/25/17	Scaffold	Loyola University Chicago	SAMN04622672	GCA_001657975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/657/975/GCA_001657975.1_ASM165797v1	-	E75
Escherichia coli	562	PRJNA322739	322739	Proteobacteria	Gammaproteobacteria	4.96145	51	-	LYRV01	844	5089	4693	6/23/16	2/25/17	Scaffold	Robert Koch Institute	SAMN05172964	GCA_001675705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/675/705/GCA_001675705.1_ASM167570v1	-	IMT26197
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13443	39.5	-	FEGJ01	62	2383	2094	2/9/16	3/13/17	Scaffold	SC	SAMEA2383065	GCA_900030355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/355/GCA_900030355.1_12754_2_45	-	2842STDY5753610
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.85406	52	-	CGTU01	59	5075	4664	4/21/15	2/28/17	Scaffold	SC	SAMEA2147683	GCA_001364075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/075/GCA_001364075.1_10493_1_38	-	MDUST207
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8292	32.8	-	FGYE01	50	2929	2772	2/10/16	3/6/17	Contig	SC	SAMEA1464447	GCA_900064515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/515/GCA_900064515.1_7748_6_59	-	st2686
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.7876	32.7	-	FGYG01	32	2873	2727	2/10/16	3/5/17	Contig	SC	SAMEA1464510	GCA_900064525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/525/GCA_900064525.1_7748_6_61	-	st2713
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93177	51.8	-	CVCE01	67	5135	4746	4/2/15	2/28/17	Scaffold	SC	SAMEA2147873	GCA_001364115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/115/GCA_001364115.1_10426_1_74	-	ty2-144
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98367	39.8	-	FEGK01	51	2191	1934	2/9/16	3/15/17	Scaffold	SC	SAMEA2383066	GCA_900030365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/365/GCA_900030365.1_12754_2_46	-	2842STDY5753611
Escherichia coli	562	PRJNA326053	326053	Proteobacteria	Gammaproteobacteria	5.28134	50.4	-	MACN01	312	5465	5056	6/27/16	2/25/17	Scaffold	Robert Koch Institute	SAMN05257103	GCA_001676975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/975/GCA_001676975.1_ASM167697v1	-	IHIT27728
Escherichia coli	562	PRJNA326053	326053	Proteobacteria	Gammaproteobacteria	5.45518	50.4	-	MADL01	168	5783	5331	6/27/16	2/25/17	Scaffold	Robert Koch Institute	SAMN05257101	GCA_001676985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/985/GCA_001676985.1_ASM167698v1	-	IHIT27704
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01519	39.8	-	FEIM01	24	2245	2014	2/9/16	3/13/17	Scaffold	SC	SAMEA2383120	GCA_900030375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/375/GCA_900030375.1_12754_3_5	-	2842STDY5753666
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93377	51.8	-	CVAU01	68	5137	4743	4/2/15	2/28/17	Scaffold	SC	SAMEA2147948	GCA_001364135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/135/GCA_001364135.1_10426_1_26	-	dn108
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86734	32.7	-	FGYH01	55	3012	2824	2/10/16	3/5/17	Contig	SC	SAMEA1464637	GCA_900064535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/535/GCA_900064535.1_7748_6_62	-	st2727
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78795	32.7	-	FHCL01	40	2872	2729	2/10/16	3/5/17	Contig	SC	SAMEA1317315	GCA_900064555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/555/GCA_900064555.1_7469_7_26	-	st1829
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93184	51.8	-	CVFS01	70	5124	4740	4/2/15	2/28/17	Scaffold	SC	SAMEA2147972	GCA_001364155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/155/GCA_001364155.1_10540_1_96	-	ty2-119
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05683	39.6	-	FELT01	35	2261	2019	2/9/16	3/13/17	Scaffold	SC	SAMEA2383205	GCA_900030385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/385/GCA_900030385.1_12754_3_90	-	2842STDY5753751
Escherichia coli	562	PRJNA326050	326050	Proteobacteria	Gammaproteobacteria	5.69089	50.4	-	MAIV01	140	6004	5577	6/27/16	2/25/17	Scaffold	Robert Koch Institute	SAMN05257099	GCA_001676995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/676/995/GCA_001676995.1_ASM167699v1	-	IHIT25637
Escherichia coli	562	PRJNA299801	299801	Proteobacteria	Gammaproteobacteria	5.32035	50.2	-	LXJG02	126	5759	5228	7/1/16	2/25/17	Scaffold	Public Health Ontario	SAMN04229509	GCA_001677535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/535/GCA_001677535.2_ASM167753v2	-	GN1212
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11571	39.4	-	FEMX01	74	2314	2055	2/9/16	3/12/17	Scaffold	SC	SAMEA2383237	GCA_900030395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/395/GCA_900030395.1_12754_4_27	-	2842STDY5753784
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73611	52	-	CGTW01	60	4895	4543	4/21/15	2/28/17	Scaffold	SC	SAMEA2148122	GCA_001364195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/195/GCA_001364195.1_10493_1_52	-	MDUST278
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.76244	32.7	-	FHDO01	50	2859	2723	2/10/16	3/6/17	Contig	SC	SAMEA1469643	GCA_900064565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/565/GCA_900064565.1_7480_8_49	-	st2393
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79904	32.7	-	FHEO01	44	2889	2747	2/10/16	3/5/17	Contig	SC	SAMEA1464522	GCA_900064575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/575/GCA_900064575.1_7564_8_42	-	st2930
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93253	51.8	-	CVAA01	71	5127	4739	4/2/15	2/28/17	Scaffold	SC	SAMEA2148202	GCA_001364215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/215/GCA_001364215.1_10425_1_24	-	dn93
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05681	39.6	-	FENC01	29	2226	2014	2/9/16	3/13/17	Scaffold	SC	SAMEA2383242	GCA_900030405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/405/GCA_900030405.1_12754_4_32	-	2842STDY5753789
Escherichia coli	562	PRJNA299801	299801	Proteobacteria	Gammaproteobacteria	5.42779	50.1	-	LXJD02	151	5906	5350	7/1/16	2/25/17	Scaffold	Public Health Ontario	SAMN04229512	GCA_001677555.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/555/GCA_001677555.2_ASM167755v2	-	GN1215
Escherichia coli	562	PRJNA299801	299801	Proteobacteria	Gammaproteobacteria	5.43151	50.2	-	LXJI02	117	5899	5351	7/1/16	2/25/17	Scaffold	Public Health Ontario	SAMN04229507	GCA_001677565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/565/GCA_001677565.2_ASM167756v2	-	GN1210
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05016	39.6	-	FENF01	29	2262	2014	2/9/16	3/5/17	Scaffold	SC	SAMEA2383245	GCA_900030415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/415/GCA_900030415.1_12754_4_35	-	2842STDY5753792
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7207	52	-	CGPS01	44	4878	4524	4/21/15	2/28/17	Scaffold	SC	SAMEA2148211	GCA_001364235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/235/GCA_001364235.1_10607_1_75	-	2011-017563
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82963	32.7	-	FHFB01	64	2919	2763	2/10/16	3/5/17	Contig	SC	SAMEA1317348	GCA_900064585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/585/GCA_900064585.1_7414_8_58	-	st893
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80471	32.7	-	FGZS01	49	2906	2761	2/10/16	3/5/17	Contig	SC	SAMEA1464271	GCA_900064785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/785/GCA_900064785.1_7564_8_52	-	st2994
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.028	51.8	-	CVFE01	60	5250	4868	4/2/15	2/28/17	Scaffold	SC	SAMEA2148278	GCA_001364295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/295/GCA_001364295.1_10540_1_8	-	dn51
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01328	39.7	-	FENP01	17	2243	2014	2/9/16	3/12/17	Scaffold	SC	SAMEA2383255	GCA_900030425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/425/GCA_900030425.1_12754_4_45	-	2842STDY5753802
Escherichia coli	562	PRJNA299801	299801	Proteobacteria	Gammaproteobacteria	5.3284	50.3	-	LXIX02	114	5738	5191	7/1/16	2/25/17	Scaffold	Public Health Ontario	SAMN04229518	GCA_001677615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/615/GCA_001677615.2_ASM167761v2	-	GN1221
Escherichia coli	562	PRJNA299801	299801	Proteobacteria	Gammaproteobacteria	5.23845	50.3	-	LXIU02	116	5644	5140	7/1/16	2/25/17	Scaffold	Public Health Ontario	SAMN04229521	GCA_001677635.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/635/GCA_001677635.2_ASM167763v2	-	GN1224
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13637	39.6	-	FENQ01	38	2386	2127	2/9/16	3/12/17	Scaffold	SC	SAMEA2383256	GCA_900030435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/435/GCA_900030435.1_12754_4_46	-	2842STDY5753803
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72199	52	-	CGNI01	53	4882	4514	4/21/15	2/28/17	Scaffold	SC	SAMEA2148294	GCA_001364315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/315/GCA_001364315.1_10562_2_64	-	MDUST374
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81379	32.7	-	FHBB01	61	2911	2763	2/10/16	3/5/17	Contig	SC	SAMEA1317447	GCA_900064795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/795/GCA_900064795.1_7414_8_16	-	st535
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85083	32.7	-	FGZL01	77	2964	2807	2/10/16	3/5/17	Contig	SC	SAMEA1464592	GCA_900065125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/125/GCA_900065125.1_7564_8_38	-	st2920
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73546	52	-	CGTP01	58	4883	4536	4/21/15	2/28/17	Scaffold	SC	SAMEA2148336	GCA_001364335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/335/GCA_001364335.1_10492_1_48	-	MDUST256
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09232	39.6	-	FENR01	31	2295	2065	2/9/16	3/13/17	Scaffold	SC	SAMEA2383257	GCA_900030445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/445/GCA_900030445.1_12754_4_47	-	2842STDY5753804
Escherichia coli	562	PRJNA299801	299801	Proteobacteria	Gammaproteobacteria	5.29855	50.3	-	LXIS02	116	5751	5202	7/1/16	2/25/17	Scaffold	Public Health Ontario	SAMN04229523	GCA_001677645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/645/GCA_001677645.2_ASM167764v2	-	GN1226
Escherichia coli	562	PRJNA299801	299801	Proteobacteria	Gammaproteobacteria	5.30309	50.3	-	LXJH02	117	5724	5195	7/1/16	2/25/17	Scaffold	Public Health Ontario	SAMN04229508	GCA_001677695.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/695/GCA_001677695.2_ASM167769v2	-	GN1211
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.97618	39.8	-	FDZL01	35	2183	1948	2/9/16	3/13/17	Scaffold	SC	SAMEA2238455	GCA_900030485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/485/GCA_900030485.1_11860_5_85	-	2842STDY5643825
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.02945	51.8	-	CVGC01	70	5248	4865	4/2/15	2/28/17	Scaffold	SC	SAMEA2148467	GCA_001364355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/355/GCA_001364355.1_10561_2_72	-	dtc180
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79597	32.7	-	FHBC01	43	2888	2746	2/10/16	3/5/17	Contig	SC	SAMEA1317530	GCA_900065325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/325/GCA_900065325.1_7414_8_50	-	st875
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84092	32.7	-	FHBQ01	100	2976	2817	2/10/16	3/5/17	Contig	SC	SAMEA1469576	GCA_900065335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/335/GCA_900065335.1_7480_7_84	-	st1322
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82522	52	-	CIBN01	59	5014	4651	4/21/15	2/28/17	Scaffold	SC	SAMEA2148678	GCA_001364395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/395/GCA_001364395.1_10561_2_49	-	H12ESR00753-001A
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08807	39.5	-	FEBI01	57	2318	2027	2/9/16	3/13/17	Scaffold	SC	SAMEA2238542	GCA_900030495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/495/GCA_900030495.1_11860_6_76	-	2842STDY5643913
Escherichia coli	562	PRJNA299801	299801	Proteobacteria	Gammaproteobacteria	5.34952	50.2	-	LXJF02	143	5779	5245	7/1/16	2/25/17	Scaffold	Public Health Ontario	SAMN04229510	GCA_001677705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/705/GCA_001677705.2_ASM167770v2	-	GN1213
Escherichia coli	562	PRJNA299801	299801	Proteobacteria	Gammaproteobacteria	5.44131	50.3	-	LXIY02	135	5927	5349	7/1/16	2/25/17	Scaffold	Public Health Ontario	SAMN04229517	GCA_001677725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/725/GCA_001677725.2_ASM167772v2	-	GN1220
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99158	39.8	-	FCPQ01	51	2189	1933	2/6/16	3/15/17	Scaffold	SC	SAMEA2238754	GCA_900030505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/505/GCA_900030505.1_12273_1_89	-	2842STDY5644128
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93249	51.8	-	CVAE01	71	5142	4737	4/2/15	2/28/17	Scaffold	SC	SAMEA2148767	GCA_001364415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/415/GCA_001364415.1_10425_1_73	-	ty2-108
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.76559	32.7	-	FHBS01	66	2846	2698	2/10/16	3/5/17	Contig	SC	SAMEA1469606	GCA_900065345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/345/GCA_900065345.1_7480_7_92	-	st1352
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.7892	32.7	-	FHAQ01	52	2879	2723	2/10/16	3/5/17	Contig	SC	SAMEA1464490	GCA_900065455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/455/GCA_900065455.1_7564_8_86	-	st3261
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71446	52.1	-	CGMG01	57	4888	4527	4/21/15	2/28/17	Scaffold	SC	SAMEA2148829	GCA_001364435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/435/GCA_001364435.1_10493_1_35	-	MDUST203
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07749	39.6	-	FCTO01	38	2271	2035	2/6/16	3/13/17	Scaffold	SC	SAMEA2238802	GCA_900030515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/515/GCA_900030515.1_11893_1_46	-	2842STDY5644176
Escherichia coli	562	PRJNA299801	299801	Proteobacteria	Gammaproteobacteria	5.47621	50.2	-	LXJB02	158	5997	5412	7/1/16	2/25/17	Scaffold	Public Health Ontario	SAMN04229514	GCA_001677855.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/855/GCA_001677855.2_ASM167785v2	-	GN1217
Escherichia coli	562	PRJNA299801	299801	Proteobacteria	Gammaproteobacteria	5.42869	50.2	-	LXIZ02	123	5910	5349	7/1/16	2/25/17	Scaffold	Public Health Ontario	SAMN04229516	GCA_001677865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/865/GCA_001677865.2_ASM167786v2	-	GN1219
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0585	39.5	-	FCUC01	38	2277	2036	2/6/16	3/13/17	Scaffold	SC	SAMEA2238827	GCA_900030525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/525/GCA_900030525.1_11893_1_68	-	2842STDY5644201
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93123	51.8	-	CVAP01	54	5135	4760	4/2/15	2/28/17	Scaffold	SC	SAMEA2148832	GCA_001364455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/455/GCA_001364455.1_10426_1_2	-	dtc110
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.80927	32.7	-	FJNW01	43	2945	2749	2/27/16	3/6/17	Contig	SC	SAMEA1929515	GCA_900070225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/070/225/GCA_900070225.1_10868_4_24	-	1943STDY5573615
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.72063	32.8	-	FJNT01	24	2821	2650	2/27/16	3/6/17	Contig	SC	SAMEA1929647	GCA_900070235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/070/235/GCA_900070235.1_10868_4_93	-	1943STDY5573748
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.8512	52	-	CGUC01	64	5047	4672	4/21/15	2/28/17	Scaffold	SC	SAMEA2148892	GCA_001364475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/475/GCA_001364475.1_10541_2_15	-	MDUST209
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.97382	39.8	-	FCUG01	21	2170	1933	2/6/16	3/8/17	Scaffold	SC	SAMEA2238831	GCA_900030535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/535/GCA_900030535.1_11893_1_72	-	2842STDY5644205
Escherichia coli	562	PRJNA299801	299801	Proteobacteria	Gammaproteobacteria	5.41711	50.3	-	LXIT02	145	5918	5373	7/1/16	2/25/17	Scaffold	Public Health Ontario	SAMN04229522	GCA_001677875.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/875/GCA_001677875.2_ASM167787v2	-	GN1225
Escherichia coli	562	PRJNA328825	328825	Proteobacteria	Gammaproteobacteria	5.08121	50.6	-	MBRL01	222	5295	4878	7/26/16	2/25/17	Scaffold	UNIVERSIDADE FEDERAL DE CIENCIAS DA SAUDE DE PORTO ALEGRE	SAMN05382650	GCA_001693555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/693/555/GCA_001693555.1_ASM169355v1	-	E2
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04521	39.6	-	FCUF01	28	2224	1997	2/6/16	3/13/17	Scaffold	SC	SAMEA2238830	GCA_900030545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/545/GCA_900030545.1_11893_1_71	-	2842STDY5644204
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93281	51.8	-	CVEM01	68	5122	4743	4/2/15	2/28/17	Scaffold	SC	SAMEA2149136	GCA_001364495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/495/GCA_001364495.1_10540_1_58	-	ty2-173
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.76212	32.7	-	FJNQ01	11	2894	2727	2/27/16	3/5/17	Contig	SC	SAMEA1929646	GCA_900070245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/070/245/GCA_900070245.1_10900_2_89	-	1943STDY5573747
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.80969	32.7	-	FJNS01	44	2942	2743	2/27/16	3/5/17	Contig	SC	SAMEA1929514	GCA_900070255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/070/255/GCA_900070255.1_10868_4_23	-	1943STDY5573614
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7437	52.1	-	CHME01	45	4926	4545	4/21/15	2/28/17	Scaffold	SC	SAMEA2149191	GCA_001364535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/535/GCA_001364535.1_10562_2_8	-	MDUST142
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99399	39.7	-	FCWL01	19	2186	1971	2/6/16	3/13/17	Scaffold	SC	SAMEA2238920	GCA_900030555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/555/GCA_900030555.1_11861_3_68	-	2842STDY5644295
Escherichia coli	562	PRJNA312020	312020	Proteobacteria	Gammaproteobacteria	4.93364	50.7	-	MCAV01	314	5171	4692	8/13/16	2/25/17	Scaffold	Swansea University	SAMN04492850	GCA_001704555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/704/555/GCA_001704555.1_NCTC86	27301915	NCTC86
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	4.86777	50.3	-	LZDV01	103	5133	4794	9/23/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN05200886	GCA_001742465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/465/GCA_001742465.1_ASM174246v1	-	EPEC 536
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99348	39.8	-	FCXI01	47	2201	1932	2/6/16	3/13/17	Scaffold	SC	SAMEA2238951	GCA_900030565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/565/GCA_900030565.1_11861_4_2	-	2842STDY5644327
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93445	51.8	-	CVEU01	72	5152	4749	4/2/15	2/28/17	Scaffold	SC	SAMEA2149333	GCA_001364555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/555/GCA_001364555.1_10540_1_66	-	as250
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.71881	32.7	-	FJNN01	24	2837	2680	2/27/16	3/5/17	Contig	SC	SAMEA1929648	GCA_900070285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/070/285/GCA_900070285.1_10900_2_90	-	1943STDY5573749
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.72341	32.8	-	FJNU01	24	2818	2636	2/27/16	3/5/17	Contig	SC	SAMEA1929516	GCA_900070295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/070/295/GCA_900070295.1_10900_2_27	-	1943STDY5573616
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.723	52	-	CGTX01	51	4873	4507	4/21/15	2/28/17	Scaffold	SC	SAMEA2149572	GCA_001364575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/575/GCA_001364575.1_10492_1_54	-	MDUST269
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05603	39.6	-	FCXT01	28	2226	2012	2/6/16	3/5/17	Scaffold	SC	SAMEA2238962	GCA_900030575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/575/GCA_900030575.1_11861_4_14	-	2842STDY5644338
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	4.98676	50.3	-	LZDW01	129	5316	4949	9/23/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN05200887	GCA_001742485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/485/GCA_001742485.1_ASM174248v1	-	EPEC 631
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.06987	50.4	-	LZDY01	162	5469	5082	9/23/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN05200889	GCA_001742545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/545/GCA_001742545.1_ASM174254v1	-	EPEC 1316
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99355	39.8	-	FCXV01	53	2207	1933	2/6/16	3/13/17	Scaffold	SC	SAMEA2238963	GCA_900030585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/585/GCA_900030585.1_11861_4_15	-	2842STDY5644339
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93295	51.8	-	CVFR01	75	5132	4752	4/2/15	2/28/17	Scaffold	SC	SAMEA2149577	GCA_001364595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/595/GCA_001364595.1_10540_1_92	-	ty2-116
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.67811	32.7	-	FJNP01	29	2705	2548	2/27/16	3/5/17	Contig	SC	SAMEA1929517	GCA_900070305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/070/305/GCA_900070305.1_10900_2_28	-	1943STDY5573617
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.91355	32.7	-	FKMC01	53	3066	2914	5/18/16	3/6/17	Contig	SC	SAMEA2063841	GCA_900080625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/625/GCA_900080625.1_10050_6_95	-	NA
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.02832	51.8	-	CVCS01	73	5249	4862	4/2/15	2/28/17	Scaffold	SC	SAMEA2149746	GCA_001364635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/635/GCA_001364635.1_10426_1_94	-	ty2-134
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06401	39.6	-	FCYA01	43	2248	2020	2/6/16	3/13/17	Scaffold	SC	SAMEA2382596	GCA_900030595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/595/GCA_900030595.1_12673_6_51	-	2842STDY5753136
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	4.97638	50.3	-	LZDZ01	117	5306	4956	9/23/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN05200890	GCA_001742555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/555/GCA_001742555.1_ASM174255v1	-	EPEC 2646
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	4.93893	50.4	-	LZEB01	119	5258	4915	9/23/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN05200892	GCA_001742575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/575/GCA_001742575.1_ASM174257v1	-	EPEC 3029
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08398	39.6	-	FCZB01	33	2301	2062	2/6/16	3/13/17	Scaffold	SC	SAMEA2674617	GCA_900030605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/605/GCA_900030605.1_14355_8_90	-	2842STDY5881877
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93248	51.8	-	CVDF01	70	5146	4747	4/2/15	2/28/17	Scaffold	SC	SAMEA2149928	GCA_001364675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/675/GCA_001364675.1_10540_1_18	-	dn95
Staphylococcus aureus	1280	PRJEB14187	357885	Terrabacteria group	Firmicutes	2.79508	32.8	-	FLLW01	26	2909	2727	12/17/16	3/6/17	Contig	Functional Genomics Genter Zurich	SAMEA4017532	GCA_900088495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/495/GCA_900088495.1_Fin47_H17	-	-
Staphylococcus aureus	1280	PRJEB14187	357885	Terrabacteria group	Firmicutes	2.79916	32.8	-	FLLX01	29	2907	2727	12/17/16	3/6/17	Contig	Functional Genomics Genter Zurich	SAMEA4017531	GCA_900088505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/505/GCA_900088505.1_Fin46_H17	-	-
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93409	51.8	-	CVFL01	71	5133	4751	4/2/15	2/28/17	Scaffold	SC	SAMEA2150199	GCA_001364715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/715/GCA_001364715.1_10540_1_88	-	ty2-106
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10159	39.6	-	FDAF01	53	2304	2047	2/6/16	3/13/17	Scaffold	SC	SAMEA2382615	GCA_900030615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/615/GCA_900030615.1_12673_6_70	-	2842STDY5753155
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	4.86472	50.5	-	LZEC01	97	5147	4768	9/23/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN05200893	GCA_001742625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/625/GCA_001742625.1_ASM174262v1	-	EPEC 1150
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	4.87189	50.5	-	LZEE01	105	5141	4758	9/23/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN05200895	GCA_001742655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/655/GCA_001742655.1_ASM174265v1	-	EPEC 2252
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06514	39.6	-	FDFQ01	43	2245	2000	2/6/16	3/13/17	Scaffold	SC	SAMEA2382758	GCA_900030625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/625/GCA_900030625.1_12718_4_23	-	2842STDY5753300
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72093	52	-	CHLY01	42	4887	4522	4/21/15	2/28/17	Scaffold	SC	SAMEA2150363	GCA_001364735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/735/GCA_001364735.1_10561_2_9	-	np43
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.67868	32.7	-	FMPH01	46	2766	2599	9/30/16	3/6/17	Contig	SC	SAMEA1708926	GCA_900097985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/985/GCA_900097985.1_9119_2_82	-	GKP138-68A
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.78981	32.7	-	FMPN01	44	2927	2757	9/30/16	3/6/17	Contig	SC	SAMEA1708813	GCA_900098005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/005/GCA_900098005.1_9119_2_28	-	GKP136-48
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.94196	51.8	-	CVFT01	89	5142	4752	4/2/15	2/28/17	Scaffold	SC	SAMEA2150434	GCA_001364755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/755/GCA_001364755.1_10540_1_93	-	ty2-133
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05142	39.6	-	FDGE01	26	2230	2005	2/6/16	3/15/17	Scaffold	SC	SAMEA2382773	GCA_900030635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/635/GCA_900030635.1_12718_4_38	-	2842STDY5753315
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	4.86341	50.5	-	LZEF01	109	5145	4759	9/23/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN05200896	GCA_001742665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/665/GCA_001742665.1_ASM174266v1	-	EPEC 2272
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.23312	50.4	-	LZEG01	225	5613	5177	9/23/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN05200897	GCA_001742705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/705/GCA_001742705.1_ASM174270v1	-	EPEC 2081
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99977	39.7	-	FDGG01	35	2210	1990	2/6/16	3/12/17	Scaffold	SC	SAMEA2382774	GCA_900030645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/645/GCA_900030645.1_12718_4_39	-	2842STDY5753316
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72082	52	-	CGTS01	52	4875	4517	4/21/15	2/28/17	Scaffold	SC	SAMEA2150435	GCA_001364775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/775/GCA_001364775.1_10492_1_85	-	MDUST412
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.80055	32.7	-	FMPJ01	49	2878	2734	9/30/16	3/6/17	Contig	SC	SAMEA1708720	GCA_900098015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/015/GCA_900098015.1_9119_2_12	-	GKP136-11
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.68066	32.7	-	FMPL01	40	2742	2601	9/30/16	3/6/17	Contig	SC	SAMEA1708914	GCA_900098025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/025/GCA_900098025.1_9119_2_75	-	GKP138-52
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93034	51.8	-	CEYK01	67	5124	4745	3/9/15	2/28/17	Scaffold	SC	SAMEA2150532	GCA_001364795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/795/GCA_001364795.1_10607_1_86	-	2008-011089
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05092	39.6	-	FDGV01	26	2238	2010	2/6/16	3/13/17	Scaffold	SC	SAMEA2382789	GCA_900030655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/655/GCA_900030655.1_12718_4_54	-	2842STDY5753331
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.49678	50.5	-	LZEH01	288	5940	5457	9/23/16	2/25/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN05200898	GCA_001742725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/725/GCA_001742725.1_ASM174272v1	-	EPEC 2827
Escherichia coli	562	PRJNA341825	341825	Proteobacteria	Gammaproteobacteria	5.3802	50.5	-	MIWI01	168	5757	5387	9/29/16	5/22/17	Scaffold	Heriot-Watt University	SAMN05729299	GCA_001748995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/995/GCA_001748995.1_ASM174899v1	-	ca285-S9
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1145	39.6	-	FDGY01	33	2319	2082	2/6/16	3/13/17	Scaffold	SC	SAMEA2382791	GCA_900030665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/665/GCA_900030665.1_12718_4_56	-	2842STDY5753333
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93259	51.8	-	CVEY01	67	5140	4749	4/2/15	2/28/17	Scaffold	SC	SAMEA2150542	GCA_001364815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/815/GCA_001364815.1_10540_1_72	-	ipt83
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.76821	32.7	-	FMPK01	57	2871	2714	9/30/16	3/6/17	Contig	SC	SAMEA1709031	GCA_900098035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/035/GCA_900098035.1_9119_2_16	-	GKP136-20
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.77901	32.7	-	FMPM01	48	2887	2727	9/30/16	3/6/17	Contig	SC	SAMEA1709015	GCA_900098045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/045/GCA_900098045.1_9119_2_19	-	GKP136-23
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70848	52.1	-	CGUD01	53	4863	4516	4/21/15	2/28/17	Scaffold	SC	SAMEA2150581	GCA_001364835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/835/GCA_001364835.1_10562_2_12	-	MDUST165
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01971	39.7	-	FDHC01	26	2221	1987	2/6/16	3/6/17	Scaffold	SC	SAMEA2382796	GCA_900030675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/675/GCA_900030675.1_12718_4_61	-	2842STDY5753338
Escherichia coli	562	PRJNA339510	339510	Proteobacteria	Gammaproteobacteria	5.18304	50.6	-	MDRZ01	51	5330	4987	11/2/16	4/17/17	Scaffold	Karolinska Institute	SAMN05592188	GCA_001865185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/185/GCA_001865185.1_ASM186518v1	28126929	Fec 67
Escherichia coli	562	PRJNA339383	339383	Proteobacteria	Gammaproteobacteria	4.95153	50.7	-	MDYZ01	42	5132	4851	11/2/16	4/17/17	Scaffold	Karolinska Institute	SAMN05590243	GCA_001865195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/195/GCA_001865195.1_ASM186519v1	28126929	Fec101
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07717	39.6	-	FDIN01	24	2297	2074	2/6/16	3/5/17	Scaffold	SC	SAMEA2382835	GCA_900030685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/685/GCA_900030685.1_12718_5_5	-	2842STDY5753378
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7283	52.1	-	CVGQ01	86	4916	4543	4/2/15	2/28/17	Scaffold	SC	SAMEA2150917	GCA_001364875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/875/GCA_001364875.1_10561_2_92	-	ty1-30
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.77842	32.7	-	FMPO01	75	2892	2723	9/30/16	3/6/17	Contig	SC	SAMEA1709025	GCA_900098055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/055/GCA_900098055.1_9119_2_20	-	GKP136-24
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.74633	32.6	-	FMPR01	72	2845	2691	9/30/16	3/6/17	Contig	SC	SAMEA1708869	GCA_900098065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/065/GCA_900098065.1_9119_2_21	-	GKP136-25
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93234	51.8	-	CVAZ01	73	5135	4753	4/2/15	2/28/17	Scaffold	SC	SAMEA2150931	GCA_001364895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/895/GCA_001364895.1_10426_1_27	-	dn57
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.994	39.8	-	FDJC01	50	2200	1932	2/6/16	3/13/17	Scaffold	SC	SAMEA2382852	GCA_900030695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/695/GCA_900030695.1_12718_5_22	-	2842STDY5753395
Escherichia coli	562	PRJNA341931	341931	Proteobacteria	Gammaproteobacteria	5.07846	50.5	-	MIIG01	58	5222	4873	11/3/16	4/17/17	Scaffold	Karolinska Institute	SAMN05730648	GCA_001865915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/915/GCA_001865915.1_ASM186591v1	28126929	No.12
Escherichia coli	562	PRJNA341932	341932	Proteobacteria	Gammaproteobacteria	4.96014	50.6	-	MIII01	53	5083	4779	11/3/16	4/17/17	Scaffold	Karolinska Institute	SAMN05730649	GCA_001865925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/925/GCA_001865925.1_ASM186592v1	28126929	80//6
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07467	39.7	-	FDLE01	18	2300	2080	2/6/16	3/13/17	Scaffold	SC	SAMEA2382909	GCA_900030705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/705/GCA_900030705.1_12718_5_79	-	2842STDY5753452
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72128	52	-	CGMP01	58	4871	4515	4/21/15	2/28/17	Scaffold	SC	SAMEA2151243	GCA_001364935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/935/GCA_001364935.1_10562_2_39	-	MDUST266
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.79522	32.7	-	FMPQ01	50	2901	2745	9/30/16	3/6/17	Contig	SC	SAMEA1708824	GCA_900098075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/075/GCA_900098075.1_9119_2_26	-	GKP136-44
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.76747	32.7	-	FMPS01	60	2895	2711	9/30/16	3/6/17	Contig	SC	SAMEA1708679	GCA_900098085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/085/GCA_900098085.1_9119_2_35	-	GKP136-62
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82781	52	-	CVAH01	54	5018	4651	4/2/15	2/28/17	Scaffold	SC	SAMEA2151286	GCA_001364955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/955/GCA_001364955.1_10426_1_13	-	dtc3
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12003	39.6	-	FDMG01	59	2344	2074	2/6/16	3/13/17	Scaffold	SC	SAMEA2382939	GCA_900030715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/715/GCA_900030715.1_12754_1_14	-	2842STDY5753483
Escherichia coli	562	PRJNA341934	341934	Proteobacteria	Gammaproteobacteria	5.19506	50.7	-	MIIK01	101	5356	5015	11/3/16	4/17/17	Scaffold	Karolinska Institute	SAMN05730651	GCA_001865975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/975/GCA_001865975.1_ASM186597v1	28126929	B-8638
Escherichia coli	562	PRJNA341935	341935	Proteobacteria	Gammaproteobacteria	5.63819	50.5	-	MIIJ01	82	5417	5062	11/3/16	4/17/17	Scaffold	Karolinska Institute	SAMN05730656	GCA_001865985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/865/985/GCA_001865985.1_ASM186598v1	28126929	B-11870
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.17237	39.6	-	FDOX01	45	2393	2139	2/6/16	3/13/17	Scaffold	SC	SAMEA2383012	GCA_900030725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/725/GCA_900030725.1_12754_1_87	-	2842STDY5753556
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82222	52	-	CGMF01	71	5020	4633	4/21/15	2/28/17	Scaffold	SC	SAMEA2151597	GCA_001364975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/364/975/GCA_001364975.1_10493_1_7	-	MDUST125
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.80004	32.7	-	FMPU01	52	2921	2762	9/30/16	3/6/17	Contig	SC	SAMEA1709037	GCA_900098095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/095/GCA_900098095.1_9119_2_36	-	GKP136-63
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.78167	32.6	-	FMPT01	49	2873	2714	9/30/16	3/6/17	Contig	SC	SAMEA1708992	GCA_900098105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/105/GCA_900098105.1_9119_2_44	-	GKP136-77
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.03069	51.8	-	CVBQ01	73	5263	4859	4/2/15	2/28/17	Scaffold	SC	SAMEA2151811	GCA_001365015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/015/GCA_001365015.1_10426_1_47	-	ipt79
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.03745	39.6	-	FEGB01	40	2242	2001	2/9/16	3/5/17	Scaffold	SC	SAMEA2383057	GCA_900030735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/735/GCA_900030735.1_12754_2_37	-	2842STDY5753602
Escherichia coli	562	PRJNA344942	344942	Proteobacteria	Gammaproteobacteria	5.62745	50.3	-	MKQI01	225	6092	5524	11/17/16	2/26/17	Scaffold	University of Delhi	SAMN05853518	GCA_001881515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/881/515/GCA_001881515.1_ASM188151v1	-	MN067
Escherichia coli	562	PRJNA299023	299023	Proteobacteria	Gammaproteobacteria	4.7572	50.7	-	LLXC01	111	4972	4622	11/23/16	2/25/17	Scaffold	Centers for Disease Control and Prevention. Division of Healthcare Quality Promotion	SAMN04192208	GCA_001885555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/555/GCA_001885555.1_ASM188555v1	-	AST_82
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02934	39.7	-	FEGV01	34	2235	2015	2/9/16	3/13/17	Scaffold	SC	SAMEA2383077	GCA_900030745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/745/GCA_900030745.1_12754_2_57	-	2842STDY5753622
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.03044	51.8	-	CVAB01	70	5263	4862	4/2/15	2/28/17	Scaffold	SC	SAMEA2151919	GCA_001365035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/035/GCA_001365035.1_10425_1_43	-	dty1-73
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.77775	32.7	-	FMPV01	67	2887	2683	9/30/16	3/6/17	Contig	SC	SAMEA1708704	GCA_900098115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/115/GCA_900098115.1_9119_2_91	-	GKP136-45
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.72091	32.6	-	FMPW01	77	2792	2635	9/30/16	3/6/17	Contig	SC	SAMEA1708945	GCA_900098125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/125/GCA_900098125.1_9119_2_80	-	GKP138-66
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69674	52.1	-	CGMA01	57	4842	4494	4/21/15	2/28/17	Scaffold	SC	SAMEA2152068	GCA_001365055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/055/GCA_001365055.1_10493_1_65	-	MDUST299
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06623	39.6	-	FEHM01	37	2265	2038	2/9/16	3/13/17	Scaffold	SC	SAMEA2383094	GCA_900030765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/765/GCA_900030765.1_12754_2_74	-	2842STDY5753639
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.31925	50.5	-	MOES01	139	5653	5281	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928847	GCA_001891215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/215/GCA_001891215.1_ASM189121v1	-	587
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.37108	50.5	-	MOER01	189	5751	5333	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928846	GCA_001891225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/225/GCA_001891225.1_ASM189122v1	-	616
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04065	39.7	-	FEKE01	38	2245	2022	2/9/16	3/5/17	Scaffold	SC	SAMEA2383164	GCA_900030775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/775/GCA_900030775.1_12754_3_49	-	2842STDY5753710
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.77221	52	-	CVGF01	57	4933	4571	4/2/15	2/28/17	Scaffold	SC	SAMEA2152078	GCA_001365075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/075/GCA_001365075.1_10561_2_77	-	ct1-19
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.79599	32.7	-	FMPX01	43	2968	2802	9/30/16	3/6/17	Contig	SC	SAMEA1708859	GCA_900098135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/135/GCA_900098135.1_9119_2_48	-	GKP138-4
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.7292	32.8	-	FMPY01	111	2788	2629	9/30/16	3/6/17	Contig	SC	SAMEA1708930	GCA_900098145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/145/GCA_900098145.1_9119_2_83	-	GKP138-69
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.02934	51.8	-	CVGH01	72	5253	4858	4/2/15	2/28/17	Scaffold	SC	SAMEA2152220	GCA_001365095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/095/GCA_001365095.1_10561_2_78	-	dty1-99
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05938	39.5	-	FEME01	40	2273	2046	2/9/16	3/12/17	Scaffold	SC	SAMEA2383215	GCA_900030785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/785/GCA_900030785.1_12754_4_5	-	2842STDY5753762
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.32231	50.5	-	MOET01	138	5680	5301	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928848	GCA_001891235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/235/GCA_001891235.1_ASM189123v1	-	674
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.28811	50.6	-	MOEU01	147	5652	5283	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928849	GCA_001891285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/285/GCA_001891285.1_ASM189128v1	-	446
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10651	39.6	-	FEMK01	35	2321	2077	2/9/16	3/13/17	Scaffold	SC	SAMEA2383224	GCA_900030795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/795/GCA_900030795.1_12754_4_14	-	2842STDY5753771
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93219	51.8	-	CVDV01	71	5122	4745	4/2/15	2/28/17	Scaffold	SC	SAMEA2152366	GCA_001365135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/135/GCA_001365135.1_10540_1_36	-	dn89
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.69493	32.6	-	FMPZ01	47	2752	2589	9/30/16	3/6/17	Contig	SC	SAMEA1709009	GCA_900098155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/155/GCA_900098155.1_9119_2_42	-	GKP136-74
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.70867	32.7	-	FMQC01	38	2811	2675	9/30/16	3/6/17	Contig	SC	SAMEA1708910	GCA_900098195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/195/GCA_900098195.1_9119_2_72	-	GKP138-41
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72398	52	-	CVFA01	60	4888	4521	4/2/15	2/28/17	Scaffold	SC	SAMEA2152424	GCA_001365155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/155/GCA_001365155.1_10540_1_74	-	ty3-222
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05337	39.6	-	FEML01	34	2265	2026	2/9/16	3/13/17	Scaffold	SC	SAMEA2383225	GCA_900030805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/805/GCA_900030805.1_12754_4_15	-	2842STDY5753772
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.21185	50.7	-	MOEX01	162	5580	5158	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928852	GCA_001891295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/295/GCA_001891295.1_ASM189129v1	-	448
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.38874	50.4	-	MOFA01	128	5737	5354	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928855	GCA_001891305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/305/GCA_001891305.1_ASM189130v1	-	576
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09517	39.5	-	FEMR01	40	2326	2078	2/9/16	3/8/17	Scaffold	SC	SAMEA2383230	GCA_900030815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/815/GCA_900030815.1_12754_4_20	-	2842STDY5753777
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93309	51.8	-	CVFX01	71	5126	4746	4/2/15	2/28/17	Scaffold	SC	SAMEA2152487	GCA_001365175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/175/GCA_001365175.1_10561_2_67	-	dtc99
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.65558	32.7	-	FMQD01	35	2731	2578	9/30/16	3/6/17	Contig	SC	SAMEA1708790	GCA_900098205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/205/GCA_900098205.1_9119_2_32	-	GKP136-54
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.68923	32.7	-	FMQE01	40	2779	2642	9/30/16	3/6/17	Contig	SC	SAMEA1708758	GCA_900098215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/215/GCA_900098215.1_9119_2_59	-	GKP138-21
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74106	52.1	-	CGPG01	52	4908	4540	4/21/15	2/28/17	Scaffold	SC	SAMEA2152511	GCA_001365195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/195/GCA_001365195.1_10607_2_23	-	BHA2QL
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99301	39.8	-	FEMQ01	43	2194	1941	2/9/16	3/13/17	Scaffold	SC	SAMEA2383231	GCA_900030825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/825/GCA_900030825.1_12754_4_21	-	2842STDY5753778
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.19029	50.6	-	MOEY01	205	5542	5125	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928853	GCA_001891315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/315/GCA_001891315.1_ASM189131v1	-	449
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.26225	50.5	-	MOFB01	175	5609	5258	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928856	GCA_001891365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/365/GCA_001891365.1_ASM189136v1	-	450
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06023	39.5	-	FENB01	42	2279	2037	2/9/16	3/12/17	Scaffold	SC	SAMEA2383241	GCA_900030835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/835/GCA_900030835.1_12754_4_31	-	2842STDY5753788
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93342	51.8	-	CVFU01	73	5136	4745	4/2/15	2/28/17	Scaffold	SC	SAMEA2152692	GCA_001365235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/235/GCA_001365235.1_10561_2_43	-	dtc122
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.79002	32.7	-	FMQF01	52	2917	2748	9/30/16	3/6/17	Contig	SC	SAMEA1709003	GCA_900098225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/225/GCA_900098225.1_9119_2_15	-	GKP136-19
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.80321	32.7	-	FMQH01	53	2929	2753	9/30/16	3/6/17	Contig	SC	SAMEA1708801	GCA_900098245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/245/GCA_900098245.1_9119_2_54	-	GKP138-13
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.01698	51.8	-	CVBV01	75	5279	4765	4/2/15	2/28/17	Scaffold	SC	SAMEA2152709	GCA_001365255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/255/GCA_001365255.1_10426_1_58	-	dty1-46
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.97369	39.9	-	FEOD01	47	2177	1903	2/9/16	3/13/17	Scaffold	SC	SAMEA2674584	GCA_900030845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/845/GCA_900030845.1_14355_8_57	-	2842STDY5881844
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.33128	50.7	-	MOFC01	289	5725	5263	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928857	GCA_001891375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/375/GCA_001891375.1_ASM189137v1	-	451
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.77275	50.2	-	MOFD01	264	6091	5635	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928858	GCA_001891385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/385/GCA_001891385.1_ASM189138v1	-	452
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01487	39.8	-	FEOF01	29	2247	2006	2/9/16	3/13/17	Scaffold	SC	SAMEA2674599	GCA_900030855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/855/GCA_900030855.1_14355_8_72	-	2842STDY5881859
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93023	51.8	-	CGQQ01	59	5123	4748	4/21/15	2/28/17	Scaffold	SC	SAMEA2152823	GCA_001365275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/275/GCA_001365275.1_10607_2_56	-	2009-017391
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.70716	32.7	-	FMQI01	31	2753	2611	9/30/16	3/6/17	Contig	SC	SAMEA1709029	GCA_900098255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/255/GCA_900098255.1_9119_2_17	-	GKP136-21
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.74196	32.7	-	FMQK01	48	2826	2670	9/30/16	3/6/17	Contig	SC	SAMEA1708855	GCA_900098275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/275/GCA_900098275.1_9119_2_24	-	GKP136-36
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.03026	51.8	-	CVET01	70	5254	4865	4/2/15	2/28/17	Scaffold	SC	SAMEA2152848	GCA_001365295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/295/GCA_001365295.1_10540_1_65	-	ty3-269
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06294	39.7	-	FEOL01	47	2263	2019	2/9/16	3/6/17	Scaffold	SC	SAMEA2674621	GCA_900030865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/030/865/GCA_900030865.1_14355_8_94	-	2842STDY5881881
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.26396	50.7	-	MOFF01	163	5582	5147	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928860	GCA_001891395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/395/GCA_001891395.1_ASM189139v1	-	454
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.42971	50.3	-	MOFJ01	204	5658	5235	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928864	GCA_001891445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/445/GCA_001891445.1_ASM189144v1	-	617
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10615	39.6	-	FDVD01	41	2318	2056	2/9/16	3/13/17	Scaffold	SC	SAMEA2239295	GCA_900031085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/085/GCA_900031085.1_11861_5_70	-	2842STDY5644679
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93072	51.8	-	CGPF01	57	5123	4737	4/21/15	2/28/17	Scaffold	SC	SAMEA2152861	GCA_001365315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/315/GCA_001365315.1_10607_1_47	-	2005-005326
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.71036	32.8	-	FMQM01	41	2771	2619	9/30/16	3/6/17	Contig	SC	SAMEA1709023	GCA_900098295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/295/GCA_900098295.1_9119_2_39	-	GKP136-67
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.76909	32.7	-	FMQO01	51	2866	2710	9/30/16	3/6/17	Contig	SC	SAMEA1708789	GCA_900098315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/315/GCA_900098315.1_9119_2_10	-	GKP136-4
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82814	52	-	CIBP01	56	5038	4638	4/21/15	2/28/17	Scaffold	SC	SAMEA2152899	GCA_001365335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/335/GCA_001365335.1_10493_1_61	-	MDUST292
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00248	39.7	-	FDVJ01	30	2227	1984	2/9/16	3/5/17	Scaffold	SC	SAMEA2238277	GCA_900031095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/095/GCA_900031095.1_11860_4_1	-	2842STDY5643646
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.29249	50.3	-	MOFK01	139	5496	5107	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928865	GCA_001891455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/455/GCA_001891455.1_ASM189145v1	-	615
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.70371	50.2	-	MOFO01	173	5894	5438	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928869	GCA_001891465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/465/GCA_001891465.1_ASM189146v1	-	625
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0854	39.6	-	FDXR01	30	2303	2059	2/9/16	3/13/17	Scaffold	SC	SAMEA2238374	GCA_900031105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/105/GCA_900031105.1_11860_5_4	-	2842STDY5643744
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.94291	51.8	-	CGQO01	65	5154	4761	4/21/15	2/28/17	Scaffold	SC	SAMEA2152977	GCA_001365375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/375/GCA_001365375.1_10608_2_16	-	2010-020905
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.78799	32.7	-	FMQP01	64	2891	2720	9/30/16	3/6/17	Contig	SC	SAMEA1708868	GCA_900098325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/325/GCA_900098325.1_9119_2_49	-	GKP138-6
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.66462	32.7	-	FMQR01	41	2719	2548	9/30/16	3/6/17	Contig	SC	SAMEA1708908	GCA_900098335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/335/GCA_900098335.1_9119_2_71	-	GKP138-39
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72118	52	-	CGMN01	54	4894	4514	4/21/15	2/28/17	Scaffold	SC	SAMEA2153127	GCA_001365395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/395/GCA_001365395.1_10561_2_50	-	np60
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05817	39.7	-	FDYV01	45	2277	2024	2/9/16	3/13/17	Scaffold	SC	SAMEA2238425	GCA_900031115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/115/GCA_900031115.1_11860_5_56	-	2842STDY5643795
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.65005	50.1	-	MOFQ01	289	5819	5345	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928871	GCA_001891475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/475/GCA_001891475.1_ASM189147v1	-	621
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.2695	50.5	-	MOFT01	124	5566	5167	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928874	GCA_001891525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/525/GCA_001891525.1_ASM189152v1	-	459
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.111	39.6	-	FEFB01	38	2316	2074	2/9/16	3/13/17	Scaffold	SC	SAMEA2238714	GCA_900031125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/125/GCA_900031125.1_11861_2_54	-	2842STDY5644087
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93335	51.8	-	CVAJ01	69	5132	4737	4/2/15	2/28/17	Scaffold	SC	SAMEA2153140	GCA_001365415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/415/GCA_001365415.1_10426_1_11	-	dn163
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.73057	32.7	-	FMQS01	36	2851	2618	9/30/16	3/6/17	Contig	SC	SAMEA1708724	GCA_900098345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/345/GCA_900098345.1_9119_2_11	-	GKP136-8
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.73194	32.7	-	FMQU01	42	2848	2639	9/30/16	3/6/17	Contig	SC	SAMEA1708715	GCA_900098355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/355/GCA_900098355.1_9119_2_13	-	GKP136-12
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.87452	51.9	-	CHLU01	70	5077	4696	4/21/15	2/28/17	Scaffold	SC	SAMEA2153165	GCA_001365435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/435/GCA_001365435.1_10561_2_29	-	3157/3
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99221	39.8	-	FCQE01	50	2189	1938	2/6/16	3/13/17	Scaffold	SC	SAMEA2238753	GCA_900031135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/135/GCA_900031135.1_12273_1_88	-	2842STDY5644127
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.13674	50.6	-	MOFU01	200	5480	5019	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928875	GCA_001891535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/535/GCA_001891535.1_ASM189153v1	-	458
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.39482	50.5	-	MOFW01	127	5757	5360	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928877	GCA_001891545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/545/GCA_001891545.1_ASM189154v1	-	457
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04467	39.7	-	FCVW01	35	2243	2031	2/6/16	3/5/17	Scaffold	SC	SAMEA2238899	GCA_900031145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/145/GCA_900031145.1_11861_3_47	-	2842STDY5644274
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73158	52	-	CGMR01	59	4897	4530	4/21/15	2/28/17	Scaffold	SC	SAMEA2153423	GCA_001365455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/455/GCA_001365455.1_10562_2_47	-	MDUST314
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.72996	32.7	-	FMQT01	31	2851	2617	9/30/16	3/6/17	Contig	SC	SAMEA1709034	GCA_900098365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/365/GCA_900098365.1_9119_2_18	-	GKP136-22
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.73488	32.7	-	FMQW01	33	2865	2630	9/30/16	3/6/17	Contig	SC	SAMEA1708819	GCA_900098375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/375/GCA_900098375.1_9119_2_27	-	GKP136-46
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72209	52	-	CHLW01	54	4896	4516	4/21/15	2/28/17	Scaffold	SC	SAMEA2153513	GCA_001365475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/475/GCA_001365475.1_10561_2_13	-	np44
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09603	39.5	-	FCXX01	34	2326	2092	2/6/16	3/13/17	Scaffold	SC	SAMEA2382592	GCA_900031155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/155/GCA_900031155.1_12673_6_47	-	2842STDY5753132
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.18135	50.6	-	MOFY01	119	5395	5013	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928879	GCA_001891555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/555/GCA_001891555.1_ASM189155v1	-	678
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.5393	50.5	-	MOFZ01	218	5940	5489	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928880	GCA_001891605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/605/GCA_001891605.1_ASM189160v1	-	623
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1286	39.7	-	FCZO01	38	2367	2119	2/6/16	3/5/17	Scaffold	SC	SAMEA2674666	GCA_900031165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/165/GCA_900031165.1_14412_3_44	-	2842STDY5881927
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69754	52.1	-	CGPW01	46	4856	4503	4/21/15	2/28/17	Scaffold	SC	SAMEA2153568	GCA_001365495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/495/GCA_001365495.1_10607_2_21	-	D56675
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.73015	32.7	-	FMQV01	36	2835	2621	9/30/16	3/6/17	Contig	SC	SAMEA1708797	GCA_900098385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/385/GCA_900098385.1_9119_2_31	-	GKP136-53
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.69339	32.7	-	FMQX01	28	2793	2580	9/30/16	3/6/17	Contig	SC	SAMEA1708896	GCA_900098395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/395/GCA_900098395.1_9119_2_45	-	GKP136-80
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.724	52	-	CGRD01	42	4903	4517	4/21/15	2/28/17	Scaffold	SC	SAMEA2153676	GCA_001365515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/515/GCA_001365515.1_10608_2_51	-	2012-011846
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09282	39.6	-	FCZT01	29	2280	2041	2/6/16	3/13/17	Scaffold	SC	SAMEA2674706	GCA_900031175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/175/GCA_900031175.1_14412_3_65	-	2842STDY5881948
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.34381	50.6	-	MOGA01	237	5620	5188	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928881	GCA_001891615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/615/GCA_001891615.1_ASM189161v1	-	704
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.27831	50.6	-	MOGC01	211	5499	5092	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928883	GCA_001891625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/625/GCA_001891625.1_ASM189162v1	-	622
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04006	39.7	-	FCZV01	23	2246	2019	2/6/16	3/13/17	Scaffold	SC	SAMEA2674713	GCA_900031185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/185/GCA_900031185.1_14412_3_69	-	2842STDY5881952
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93164	51.8	-	CVCZ01	72	5120	4739	4/2/15	2/28/17	Scaffold	SC	SAMEA2153752	GCA_001365535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/535/GCA_001365535.1_10540_1_15	-	dn192
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.69083	32.7	-	FMQZ01	30	2786	2569	9/30/16	3/6/17	Contig	SC	SAMEA1708730	GCA_900098405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/405/GCA_900098405.1_9119_2_55	-	GKP138-16
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.7292	32.7	-	FMQY01	30	2861	2622	9/30/16	3/6/17	Contig	SC	SAMEA1708738	GCA_900098415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/415/GCA_900098415.1_9119_2_57	-	GKP138-18
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.85255	52	-	CHLX01	61	5064	4677	4/21/15	2/28/17	Scaffold	SC	SAMEA2153764	GCA_001365555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/555/GCA_001365555.1_10492_1_51	-	MDUST259
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.002	39.7	-	FDCP01	44	2217	1987	2/6/16	3/12/17	Scaffold	SC	SAMEA2382677	GCA_900031195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/195/GCA_900031195.1_12673_7_37	-	2842STDY5753218
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.4528	50.3	-	MOGD01	131	5830	5453	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928884	GCA_001891655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/655/GCA_001891655.1_ASM189165v1	-	481
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.31505	50.4	-	MOGG01	114	5654	5283	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928887	GCA_001891685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/685/GCA_001891685.1_ASM189168v1	-	578
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09673	39.6	-	FDDE01	28	2297	2063	2/6/16	3/13/17	Scaffold	SC	SAMEA2382693	GCA_900031205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/205/GCA_900031205.1_12673_7_53	-	2842STDY5753234
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9315	51.8	-	CVCI01	68	5126	4740	4/2/15	2/28/17	Scaffold	SC	SAMEA2153915	GCA_001365575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/575/GCA_001365575.1_10426_1_79	-	ty2-114
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.75615	32.7	-	FMRA01	51	2877	2646	9/30/16	3/6/17	Contig	SC	SAMEA1708671	GCA_900098425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/425/GCA_900098425.1_9119_2_63	-	GKP138-26
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.73095	32.7	-	FMRB01	33	2840	2622	9/30/16	3/6/17	Contig	SC	SAMEA1708909	GCA_900098435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/435/GCA_900098435.1_9119_2_79	-	GKP138-63
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72622	52	-	CGLS01	53	4888	4511	4/21/15	2/28/17	Scaffold	SC	SAMEA2153945	GCA_001365615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/615/GCA_001365615.1_10493_1_45	-	MDUST236
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11634	39.5	-	FDEH01	51	2304	2054	2/6/16	3/8/17	Scaffold	SC	SAMEA2382725	GCA_900031215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/215/GCA_900031215.1_12673_7_85	-	2842STDY5753266
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.51315	50.6	-	MOGF01	109	5851	5425	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928886	GCA_001891695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/695/GCA_001891695.1_ASM189169v1	-	636
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	4.99775	50.7	-	MOGH01	202	5304	4836	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928888	GCA_001891705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/705/GCA_001891705.1_ASM189170v1	-	480
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09593	39.6	-	FDGM01	32	2271	2052	2/6/16	3/12/17	Scaffold	SC	SAMEA2382780	GCA_900031225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/225/GCA_900031225.1_12718_4_45	-	2842STDY5753322
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93078	51.8	-	CGPZ01	56	5116	4741	4/21/15	2/28/17	Scaffold	SC	SAMEA2154090	GCA_001365635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/635/GCA_001365635.1_10607_1_76	-	2011-019378
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.75565	32.7	-	FMRD01	37	2887	2650	9/30/16	3/6/17	Contig	SC	SAMEA1708953	GCA_900098445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/445/GCA_900098445.1_9119_2_81	-	GKP138-67
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.73462	32.7	-	FMRE01	25	2865	2638	9/30/16	3/6/17	Contig	SC	SAMEA1708683	GCA_900098455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/455/GCA_900098455.1_9119_2_86	-	GKP138-73A
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.87372	51.9	-	CGMJ01	71	5064	4688	4/21/15	2/28/17	Scaffold	SC	SAMEA2154093	GCA_001365655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/655/GCA_001365655.1_10561_2_21	-	3182/3
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06565	39.6	-	FDIM01	29	2269	2042	2/6/16	3/6/17	Scaffold	SC	SAMEA2382834	GCA_900031235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/235/GCA_900031235.1_12718_5_4	-	2842STDY5753377
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.45269	50.3	-	MOGJ01	125	5758	5336	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928890	GCA_001891725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/725/GCA_001891725.1_ASM189172v1	-	635
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.5298	50.6	-	MOGL01	147	5870	5454	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928892	GCA_001891765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/765/GCA_001891765.1_ASM189176v1	-	478
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07471	39.6	-	FDIT01	34	2256	2017	2/6/16	3/13/17	Scaffold	SC	SAMEA2382841	GCA_900031245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/245/GCA_900031245.1_12718_5_11	-	2842STDY5753384
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.02742	51.8	-	CVBU01	57	5252	4871	4/2/15	2/28/17	Scaffold	SC	SAMEA2154153	GCA_001365675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/675/GCA_001365675.1_10426_1_61	-	dty1-93
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.68818	32.7	-	FMRC01	27	2776	2564	9/30/16	3/6/17	Contig	SC	SAMEA1708680	GCA_900098465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/465/GCA_900098465.1_9119_2_87	-	GKP138-74
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.72188	32.7	-	FMRF01	37	2823	2613	9/30/16	3/6/17	Contig	SC	SAMEA1708658	GCA_900098475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/475/GCA_900098475.1_9119_2_61	-	GKP138-23
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.75513	52	-	CGMC01	55	4918	4559	4/21/15	2/28/17	Scaffold	SC	SAMEA2154159	GCA_001365695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/695/GCA_001365695.1_10493_1_14	-	MDUST140
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09125	39.7	-	FDLH01	26	2312	2091	2/6/16	3/5/17	Scaffold	SC	SAMEA2382912	GCA_900031255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/255/GCA_900031255.1_12718_5_82	-	2842STDY5753455
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.47911	50.6	-	MOGM01	221	5760	5250	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928893	GCA_001891785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/785/GCA_001891785.1_ASM189178v1	-	591
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.27041	50.7	-	MOGO01	185	5608	5200	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928895	GCA_001891795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/795/GCA_001891795.1_ASM189179v1	-	596
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1199	39.6	-	FDLO01	34	2323	2074	2/6/16	3/13/17	Scaffold	SC	SAMEA2382919	GCA_900031265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/265/GCA_900031265.1_12718_5_89	-	2842STDY5753462
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7393	52.1	-	CHMF01	66	4933	4562	4/21/15	2/28/17	Scaffold	SC	SAMEA2154173	GCA_001365715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/715/GCA_001365715.1_10561_2_25	-	np12
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.69077	32.7	-	FMRG01	24	2794	2570	9/30/16	3/6/17	Contig	SC	SAMEA1708904	GCA_900098485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/485/GCA_900098485.1_9119_2_78	-	GKP138-61
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.72782	32.7	-	FMRH01	41	2827	2607	9/30/16	3/6/17	Contig	SC	SAMEA1708709	GCA_900098505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/505/GCA_900098505.1_9119_2_14	-	GKP136-18
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72284	52	-	CVEP01	55	4881	4511	4/2/15	2/28/17	Scaffold	SC	SAMEA2154250	GCA_001365735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/735/GCA_001365735.1_10540_1_61	-	ct1-66
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.977	39.8	-	FDLS01	36	2186	1951	2/6/16	3/13/17	Scaffold	SC	SAMEA2382922	GCA_900031275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/275/GCA_900031275.1_12718_5_92	-	2842STDY5753465
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.2852	50.6	-	MOGP01	233	5547	5146	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928896	GCA_001891805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/805/GCA_001891805.1_ASM189180v1	-	477
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.04066	50.6	-	MOGQ01	166	5364	4915	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928897	GCA_001891835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/835/GCA_001891835.1_ASM189183v1	-	710
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1414	39.5	-	FDMI01	55	2385	2123	2/6/16	3/12/17	Scaffold	SC	SAMEA2382942	GCA_900031285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/285/GCA_900031285.1_12754_1_17	-	2842STDY5753486
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.82567	52	-	CHLV01	54	5014	4642	4/21/15	2/28/17	Scaffold	SC	SAMEA2154259	GCA_001365755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/755/GCA_001365755.1_10562_2_80	-	MDUST405
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.72984	32.7	-	FMRK01	32	2831	2613	9/30/16	3/6/17	Contig	SC	SAMEA1708947	GCA_900098515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/515/GCA_900098515.1_9119_2_73	-	GKP138-44
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.68081	32.7	-	FMRJ01	40	2732	2580	9/30/16	3/6/17	Contig	SC	SAMEA1708766	GCA_900098525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/525/GCA_900098525.1_9119_2_33	-	GKP136-57
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73613	52	-	CGME01	60	4889	4542	4/21/15	2/28/17	Scaffold	SC	SAMEA2154285	GCA_001365775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/775/GCA_001365775.1_10493_1_57	-	MDUST287
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05909	39.7	-	FDOJ01	23	2282	2044	2/6/16	3/13/17	Scaffold	SC	SAMEA2382998	GCA_900031295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/295/GCA_900031295.1_12754_1_73	-	2842STDY5753542
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.58612	50.5	-	MOGT01	134	5942	5497	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928901	GCA_001891865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/865/GCA_001891865.1_ASM189186v1	-	474
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.66662	50.6	-	MOGU01	128	6038	5611	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928902	GCA_001891875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/875/GCA_001891875.1_ASM189187v1	-	634
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08042	39.7	-	FEGR01	42	2318	2096	2/9/16	3/13/17	Scaffold	SC	SAMEA2383073	GCA_900031305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/305/GCA_900031305.1_12754_2_53	-	2842STDY5753618
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93214	51.8	-	CVGE01	53	5136	4750	4/2/15	2/28/17	Scaffold	SC	SAMEA2154308	GCA_001365795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/795/GCA_001365795.1_10561_2_74	-	dtc107
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.70387	32.8	-	FMRL01	25	2787	2617	9/30/16	3/6/17	Contig	SC	SAMEA1708807	GCA_900098535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/535/GCA_900098535.1_9119_2_53	-	GKP138-7
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.74028	32.8	-	FMRM01	69	2819	2669	9/30/16	3/6/17	Contig	SC	SAMEA1708877	GCA_900098545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/545/GCA_900098545.1_9119_2_46	-	GKP136-83
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.8746	51.9	-	CGMU01	71	5079	4694	4/21/15	2/28/17	Scaffold	SC	SAMEA2154335	GCA_001365815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/815/GCA_001365815.1_10561_2_48	-	3673/3
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1201	39.6	-	FEGT01	40	2322	2086	2/9/16	3/5/17	Scaffold	SC	SAMEA2383075	GCA_900031315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/315/GCA_900031315.1_12754_2_55	-	2842STDY5753620
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.08538	50.4	-	MOGV01	176	5428	4959	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928903	GCA_001891885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/885/GCA_001891885.1_ASM189188v1	-	473
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.19254	50.6	-	MOGR01	145	5468	5067	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928898	GCA_001891925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/925/GCA_001891925.1_ASM189192v1	-	475
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.067	39.6	-	FEIG01	36	2261	2024	2/9/16	3/13/17	Scaffold	SC	SAMEA2383114	GCA_900031325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/325/GCA_900031325.1_12754_2_94	-	2842STDY5753659
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72459	52	-	CHLM01	59	4875	4513	4/21/15	2/28/17	Scaffold	SC	SAMEA2154370	GCA_001365835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/835/GCA_001365835.1_10493_1_26	-	MDUST174
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.74814	32.8	-	FMRN01	70	2840	2680	9/30/16	3/6/17	Contig	SC	SAMEA1708981	GCA_900098555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/555/GCA_900098555.1_9119_2_65	-	GKP138-27
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.75155	32.8	-	FMRO01	51	2840	2688	9/30/16	3/6/17	Contig	SC	SAMEA1708977	GCA_900098565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/565/GCA_900098565.1_9119_2_66	-	GKP138-31
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9333	51.8	-	CVGA01	69	5132	4745	4/2/15	2/28/17	Scaffold	SC	SAMEA2154371	GCA_001365855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/855/GCA_001365855.1_10561_2_70	-	dtc20
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06018	39.5	-	FEIO01	38	2277	2046	2/9/16	3/13/17	Scaffold	SC	SAMEA2383123	GCA_900031335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/335/GCA_900031335.1_12754_3_8	-	2842STDY5753669
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.47427	50.6	-	MOGW01	242	5730	5239	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928904	GCA_001891945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/945/GCA_001891945.1_ASM189194v1	-	472
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.52264	50.6	-	MOGY01	126	5883	5438	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928906	GCA_001891965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/965/GCA_001891965.1_ASM189196v1	-	586
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05547	39.5	-	FEJK01	44	2274	2016	2/9/16	3/8/17	Scaffold	SC	SAMEA2383144	GCA_900031345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/345/GCA_900031345.1_12754_3_29	-	2842STDY5753690
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.79361	52	-	CFAP01	60	4974	4610	3/11/15	2/28/17	Scaffold	SC	SAMEA2154386	GCA_001365875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/875/GCA_001365875.1_10492_1_75	-	MDUST391
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.71536	32.8	-	FMRQ01	30	2778	2634	9/30/16	3/6/17	Contig	SC	SAMEA1708883	GCA_900098575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/575/GCA_900098575.1_9119_2_47	-	GKP138-2
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.75151	32.8	-	FMRP01	71	2838	2683	9/30/16	3/6/17	Contig	SC	SAMEA1708955	GCA_900098585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/585/GCA_900098585.1_9119_2_74	-	GKP138-50
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72148	52	-	CVBA01	54	4891	4524	4/2/15	2/28/17	Scaffold	SC	SAMEA2154608	GCA_001365915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/915/GCA_001365915.1_10426_1_36	-	ipt47
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04659	39.7	-	FEJQ01	19	2258	2030	2/9/16	3/13/17	Scaffold	SC	SAMEA2383150	GCA_900031355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/355/GCA_900031355.1_12754_3_35	-	2842STDY5753696
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.39959	50.7	-	MOHA01	191	5738	5300	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928907	GCA_001891975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/975/GCA_001891975.1_ASM189197v1	-	583
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.16308	50.5	-	MOHB01	112	5395	4998	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928909	GCA_001891995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/891/995/GCA_001891995.1_ASM189199v1	-	629
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0433	39.8	-	FELU01	22	2294	2054	2/9/16	3/6/17	Scaffold	SC	SAMEA2383206	GCA_900031365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/365/GCA_900031365.1_12754_3_91	-	2842STDY5753752
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72309	52	-	CVEW01	54	4876	4511	4/2/15	2/28/17	Scaffold	SC	SAMEA2154612	GCA_001365935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/935/GCA_001365935.1_10540_1_69	-	as252
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.70463	32.8	-	FMRR01	34	2772	2615	9/30/16	3/6/17	Contig	SC	SAMEA1708688	GCA_900098595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/595/GCA_900098595.1_9119_2_88	-	GKP138-75
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.71256	32.7	-	FMRT01	45	2775	2629	9/30/16	3/6/17	Contig	SC	SAMEA1709026	GCA_900098605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/605/GCA_900098605.1_9119_2_38	-	GKP136-64
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.02831	51.8	-	CVGI01	71	5245	4858	4/2/15	2/28/17	Scaffold	SC	SAMEA2154690	GCA_001365955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/955/GCA_001365955.1_10561_2_79	-	dty1-71
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01778	39.7	-	FEMI01	21	2235	2007	2/9/16	3/15/17	Scaffold	SC	SAMEA2383222	GCA_900031375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/375/GCA_900031375.1_12754_4_12	-	2842STDY5753769
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.45073	50.6	-	MOHC01	135	5806	5419	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928910	GCA_001892025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/025/GCA_001892025.1_ASM189202v1	-	574
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.09027	50.4	-	MOHF01	187	5406	4972	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928913	GCA_001892055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/055/GCA_001892055.1_ASM189205v1	-	630
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13816	39.5	-	FEES01	61	2384	2095	2/9/16	3/13/17	Scaffold	SC	SAMEA2238700	GCA_900031515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/515/GCA_900031515.1_11861_2_39	-	2842STDY5644073
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93233	51.8	-	CVBH01	69	5119	4744	4/2/15	2/28/17	Scaffold	SC	SAMEA2154793	GCA_001365975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/975/GCA_001365975.1_10426_1_30	-	dtc21
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.79451	32.8	-	FMRU01	41	2919	2740	9/30/16	3/6/17	Contig	SC	SAMEA1929510	GCA_900098635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/635/GCA_900098635.1_10868_4_21	-	GKP136-65
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.67863	32.7	-	FMRX01	38	2762	2610	9/30/16	3/6/17	Contig	SC	SAMEA1708918	GCA_900098665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/665/GCA_900098665.1_9119_2_76	-	GKP138-53
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.03925	51.8	-	CVGJ01	72	5266	4875	4/2/15	2/28/17	Scaffold	SC	SAMEA2155002	GCA_001365995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/365/995/GCA_001365995.1_10561_2_80	-	ty2-121
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00027	39.7	-	FEIR01	35	2214	1996	2/9/16	3/5/17	Scaffold	SC	SAMEA2383125	GCA_900031525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/525/GCA_900031525.1_12754_3_10	-	2842STDY5753671
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.28588	50.3	-	MOHG01	104	5491	5115	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928914	GCA_001892065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/065/GCA_001892065.1_ASM189206v1	-	467
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.37551	50.2	-	MOHH01	140	5582	5180	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928915	GCA_001892105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/105/GCA_001892105.1_ASM189210v1	-	466
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06412	39.6	-	FEKW01	34	2241	2021	2/9/16	3/13/17	Scaffold	SC	SAMEA2383182	GCA_900031535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/535/GCA_900031535.1_12754_3_67	-	2842STDY5753728
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72374	52	-	CHFX01	55	4887	4522	4/21/15	2/28/17	Scaffold	SC	SAMEA2155152	GCA_001366015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/015/GCA_001366015.1_10492_1_76	-	MDUST393
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.7044	32.7	-	FMRY01	44	2788	2629	9/30/16	3/6/17	Contig	SC	SAMEA1708902	GCA_900098685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/685/GCA_900098685.1_9119_2_70	-	GKP138-38
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.73346	32.7	-	FMSA01	28	2874	2630	9/30/16	3/6/17	Contig	SC	SAMEA1709016	GCA_900098705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/705/GCA_900098705.1_9119_2_40	-	GKP136-68
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93287	51.8	-	CGQP01	57	5131	4750	4/21/15	2/28/17	Scaffold	SC	SAMEA2155193	GCA_001366035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/035/GCA_001366035.1_10608_2_44	-	01-2012-002876
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10892	39.5	-	FDVW01	42	2318	2057	2/9/16	3/13/17	Scaffold	SC	SAMEA2238294	GCA_900031725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/725/GCA_900031725.1_11860_4_19	-	2842STDY5643663
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.36452	50.2	-	MOHI01	129	5579	5165	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928916	GCA_001892125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/125/GCA_001892125.1_ASM189212v1	-	465
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.40278	50.2	-	MOHJ01	158	5604	5199	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928917	GCA_001892135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/135/GCA_001892135.1_ASM189213v1	-	628
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0467	39.6	-	FDYU01	37	2235	1999	2/9/16	3/12/17	Scaffold	SC	SAMEA2238424	GCA_900031735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/735/GCA_900031735.1_11860_5_55	-	2842STDY5643794
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93214	51.8	-	CVFV01	72	5135	4740	4/2/15	2/28/17	Scaffold	SC	SAMEA2155272	GCA_001366055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/055/GCA_001366055.1_10561_2_24	-	dtc97
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.75523	32.7	-	FMSB01	45	2876	2658	9/30/16	3/6/17	Contig	SC	SAMEA1708737	GCA_900098715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/715/GCA_900098715.1_9119_2_56	-	GKP138-17
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.77253	32.7	-	FMSC01	106	2840	2663	9/30/16	3/6/17	Contig	SC	SAMEA1708769	GCA_900098725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/725/GCA_900098725.1_9119_2_34	-	GKP136-58
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93086	51.8	-	CGUP01	86	5134	4732	4/21/15	2/28/17	Scaffold	SC	SAMEA2155345	GCA_001366075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/075/GCA_001366075.1_10608_1_1	-	2008-003275
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11764	39.6	-	FEAY01	55	2381	2108	2/9/16	3/13/17	Scaffold	SC	SAMEA2238522	GCA_900031745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/745/GCA_900031745.1_11822_8_37	-	2842STDY5643893
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	6.0493	50.1	-	MOHK01	636	6430	5793	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928918	GCA_001892145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/145/GCA_001892145.1_ASM189214v1	-	627
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.36686	50.2	-	MOHN01	128	5574	5171	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928920	GCA_001892185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/185/GCA_001892185.1_ASM189218v1	-	464
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11456	39.6	-	FCSZ01	53	2311	2062	2/6/16	3/13/17	Scaffold	SC	SAMEA2239102	GCA_900031755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/755/GCA_900031755.1_11860_7_63	-	2842STDY5644483
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.92173	51.8	-	CVEX01	66	5103	4727	4/2/15	2/28/17	Scaffold	SC	SAMEA2155435	GCA_001366095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/095/GCA_001366095.1_10540_1_68	-	ct1-70
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.75471	32.7	-	FQDA01	17	2856	2707	11/23/16	3/6/17	Contig	SC	SAMEA3448980	GCA_900124665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/665/GCA_900124665.1_17138_2_11	-	3688STDY6124970
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.80708	32.7	-	FQDE01	31	2905	2749	11/23/16	3/6/17	Contig	SC	SAMEA3448985	GCA_900124695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/695/GCA_900124695.1_17138_2_16	-	3688STDY6124975
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93283	51.8	-	CVAD01	67	5136	4732	4/2/15	2/28/17	Scaffold	SC	SAMEA2155469	GCA_001366115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/115/GCA_001366115.1_10425_1_23	-	dn86
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98517	39.8	-	FCTS01	48	2187	1941	2/6/16	3/13/17	Scaffold	SC	SAMEA2238812	GCA_900031765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/765/GCA_900031765.1_11822_8_50	-	2842STDY5644186
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.58349	50.5	-	MOHO01	125	5945	5503	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928921	GCA_001892205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/205/GCA_001892205.1_ASM189220v1	-	650
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.38419	50.5	-	MOEV01	221	5728	5323	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928850	GCA_001892215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/215/GCA_001892215.1_ASM189221v1	-	694
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.97682	39.8	-	FCUI01	26	2171	1940	2/6/16	3/13/17	Scaffold	SC	SAMEA2238834	GCA_900031775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/775/GCA_900031775.1_11893_1_75	-	2842STDY5644208
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.02865	51.8	-	CVFD01	52	5253	4865	4/2/15	2/28/17	Scaffold	SC	SAMEA2155517	GCA_001366135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/135/GCA_001366135.1_10540_1_79	-	ipt16
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79718	32.7	-	FQDF01	37	2881	2727	11/23/16	3/6/17	Contig	SC	SAMEA3448986	GCA_900124705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/705/GCA_900124705.1_17138_2_17	-	3688STDY6124976
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79977	32.7	-	FQDG01	32	2880	2729	11/23/16	3/8/17	Contig	SC	SAMEA3448987	GCA_900124715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/715/GCA_900124715.1_17138_2_18	-	3688STDY6124977
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.70892	52.1	-	CGLV01	54	4872	4520	4/21/15	2/28/17	Scaffold	SC	SAMEA2155662	GCA_001366155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/155/GCA_001366155.1_10493_1_85	-	MDUST407
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08263	39.6	-	FCUP01	30	2288	2058	2/6/16	3/6/17	Scaffold	SC	SAMEA2238849	GCA_900031785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/785/GCA_900031785.1_12216_4_89	-	2842STDY5644224
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.44212	50.5	-	MOEW01	189	5841	5433	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928851	GCA_001892245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/245/GCA_001892245.1_ASM189224v1	-	447
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.63358	50.4	-	MOEZ01	318	6057	5600	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928854	GCA_001892255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/255/GCA_001892255.1_ASM189225v1	-	558
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99172	39.8	-	FCVO01	46	2186	1945	2/6/16	3/15/17	Scaffold	SC	SAMEA2238884	GCA_900031795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/795/GCA_900031795.1_11861_3_30	-	2842STDY5644259
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93188	51.8	-	CVDB01	72	5117	4744	4/2/15	2/28/17	Scaffold	SC	SAMEA2155700	GCA_001366175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/175/GCA_001366175.1_10540_1_11	-	dtc84
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79615	32.7	-	FQDH01	30	2880	2727	11/23/16	3/6/17	Contig	SC	SAMEA3448971	GCA_900124725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/725/GCA_900124725.1_17138_2_2	-	3688STDY6124961
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79806	32.8	-	FQDI01	32	2879	2723	11/23/16	3/6/17	Contig	SC	SAMEA3448989	GCA_900124735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/735/GCA_900124735.1_17138_2_20	-	3688STDY6124979
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81891	51.9	-	CVDJ01	58	5014	4642	4/2/15	2/28/17	Scaffold	SC	SAMEA2156043	GCA_001366215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/215/GCA_001366215.1_10540_1_32	-	dn137
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11935	39.6	-	FDCO01	41	2378	2114	2/6/16	3/13/17	Scaffold	SC	SAMEA2382678	GCA_900031805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/805/GCA_900031805.1_12673_7_38	-	2842STDY5753219
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.55459	50.3	-	MOFE01	190	5932	5534	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928859	GCA_001892275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/275/GCA_001892275.1_ASM189227v1	-	453
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.83298	50.4	-	MOFG01	331	6262	5734	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928861	GCA_001892295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/295/GCA_001892295.1_ASM189229v1	-	619
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07674	39.5	-	FDCV01	35	2279	2032	2/6/16	3/13/17	Scaffold	SC	SAMEA2382684	GCA_900031815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/815/GCA_900031815.1_12673_7_44	-	2842STDY5753225
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93174	51.8	-	CVBX01	70	5123	4746	4/2/15	2/28/17	Scaffold	SC	SAMEA2156082	GCA_001366235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/235/GCA_001366235.1_10426_1_63	-	dty1-67
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79985	32.7	-	FQDJ01	32	2879	2729	11/23/16	3/6/17	Contig	SC	SAMEA3448990	GCA_900124745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/745/GCA_900124745.1_17138_2_21	-	3688STDY6124980
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.71532	32.7	-	FQDK01	19	2816	2663	11/23/16	3/6/17	Contig	SC	SAMEA3448991	GCA_900124755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/755/GCA_900124755.1_17138_2_22	-	3688STDY6124981
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7186	52	-	CGTQ01	53	4878	4520	4/21/15	2/28/17	Scaffold	SC	SAMEA2156166	GCA_001366255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/255/GCA_001366255.1_10492_1_58	-	MDUST310
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12547	39.7	-	FDDD01	44	2370	2125	2/6/16	3/13/17	Scaffold	SC	SAMEA2382692	GCA_900031825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/825/GCA_900031825.1_12673_7_52	-	2842STDY5753233
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.34259	50.2	-	MOFH01	133	5571	5170	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928862	GCA_001892325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/325/GCA_001892325.1_ASM189232v1	-	455
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.47545	50.5	-	MOFL01	161	5864	5417	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928866	GCA_001892335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/335/GCA_001892335.1_ASM189233v1	-	463
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12958	39.6	-	FDDG01	36	2372	2118	2/6/16	3/13/17	Scaffold	SC	SAMEA2382695	GCA_900031835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/835/GCA_900031835.1_12673_7_55	-	2842STDY5753236
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93197	51.8	-	CVBI01	68	5121	4746	4/2/15	2/28/17	Scaffold	SC	SAMEA2156218	GCA_001366275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/275/GCA_001366275.1_10426_1_42	-	ty3-253
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.82913	32.7	-	FQDM01	22	2988	2837	11/23/16	3/8/17	Contig	SC	SAMEA3448993	GCA_900124775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/775/GCA_900124775.1_17138_2_24	-	3688STDY6124983
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79797	32.7	-	FQDR01	33	2877	2721	11/23/16	3/6/17	Contig	SC	SAMEA3448999	GCA_900124825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/825/GCA_900124825.1_17138_2_30	-	3688STDY6124989
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.80944	52	-	CGUO01	122	5013	4607	4/21/15	2/28/17	Scaffold	SC	SAMEA2156579	GCA_001366315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/315/GCA_001366315.1_10608_1_2	-	2007-025892
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01378	39.7	-	FDDH01	25	2240	2015	2/6/16	3/13/17	Scaffold	SC	SAMEA2382696	GCA_900031845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/845/GCA_900031845.1_12673_7_56	-	2842STDY5753237
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.36326	50.7	-	MOFI01	331	5683	5211	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928863	GCA_001892355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/355/GCA_001892355.1_ASM189235v1	-	620
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.1629	50.7	-	MOFM01	206	5575	5133	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928867	GCA_001892365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/365/GCA_001892365.1_ASM189236v1	-	462
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01488	39.7	-	FDDM01	24	2255	2012	2/6/16	3/13/17	Scaffold	SC	SAMEA2382701	GCA_900031855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/855/GCA_900031855.1_12673_7_61	-	2842STDY5753242
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72218	52	-	CVBG01	53	4873	4506	4/2/15	2/28/17	Scaffold	SC	SAMEA2156635	GCA_001366335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/335/GCA_001366335.1_10426_1_48	-	dty1-86
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.71677	32.7	-	FQDU01	17	2785	2662	11/23/16	3/8/17	Contig	SC	SAMEA3449005	GCA_900124855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/855/GCA_900124855.1_17138_2_36	-	3688STDY6124995
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.75774	32.8	-	FQDW01	16	2877	2714	11/23/16	3/6/17	Contig	SC	SAMEA3449008	GCA_900124885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/885/GCA_900124885.1_17138_2_39	-	3688STDY6124998
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93216	51.8	-	CVAN01	66	5132	4738	4/2/15	2/28/17	Scaffold	SC	SAMEA2156655	GCA_001366375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/375/GCA_001366375.1_10426_1_17	-	dtc92
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99194	39.8	-	FDDN01	48	2186	1930	2/6/16	3/13/17	Scaffold	SC	SAMEA2382702	GCA_900031865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/865/GCA_900031865.1_12673_7_62	-	2842STDY5753243
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.70788	50.1	-	MOFN01	145	5912	5453	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928868	GCA_001892405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/405/GCA_001892405.1_ASM189240v1	-	461
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.43154	50.4	-	MOFP01	133	5791	5396	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928870	GCA_001892425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/425/GCA_001892425.1_ASM189242v1	-	460
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02129	39.7	-	FDDO01	22	2233	2009	2/6/16	3/13/17	Scaffold	SC	SAMEA2382703	GCA_900031875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/875/GCA_900031875.1_12673_7_63	-	2842STDY5753244
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69241	52.1	-	CVCT01	54	4854	4498	4/2/15	2/28/17	Scaffold	SC	SAMEA2156869	GCA_001366435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/435/GCA_001366435.1_10493_1_44	-	MDUST235
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79394	32.7	-	FQDX01	34	2873	2719	11/23/16	3/6/17	Contig	SC	SAMEA3448973	GCA_900124895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/895/GCA_900124895.1_17138_2_4	-	3688STDY6124963
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.78446	32.7	-	FQDZ01	30	2867	2717	11/23/16	3/6/17	Contig	SC	SAMEA3449009	GCA_900124905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/905/GCA_900124905.1_17138_2_40	-	3688STDY6124999
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93276	51.8	-	CVFM01	69	5124	4752	4/2/15	2/28/17	Scaffold	SC	SAMEA2157029	GCA_001366455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/455/GCA_001366455.1_10540_1_90	-	ty2-143
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.19517	39.6	-	FDEK01	63	2442	2175	2/6/16	3/13/17	Scaffold	SC	SAMEA2382726	GCA_900031885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/885/GCA_900031885.1_12673_7_86	-	2842STDY5753267
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.30165	50.5	-	MOFR01	283	5672	5225	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928872	GCA_001892435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/435/GCA_001892435.1_ASM189243v1	-	624
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.1741	50.6	-	MOFS01	150	5516	5126	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928873	GCA_001892445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/445/GCA_001892445.1_ASM189244v1	-	585
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.9929	39.8	-	FDGB01	42	2197	1932	2/6/16	3/13/17	Scaffold	SC	SAMEA2382769	GCA_900031895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/895/GCA_900031895.1_12718_4_34	-	2842STDY5753311
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72125	52	-	CGUF01	55	4884	4509	4/21/15	2/28/17	Scaffold	SC	SAMEA2157060	GCA_001366475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/475/GCA_001366475.1_10561_2_45	-	np57
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.71495	32.7	-	FQEA01	18	2784	2658	11/23/16	3/6/17	Contig	SC	SAMEA3449010	GCA_900124915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/915/GCA_900124915.1_17138_2_41	-	3688STDY6125000
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.78188	32.7	-	FQEC01	17	2914	2745	11/23/16	3/6/17	Contig	SC	SAMEA3449014	GCA_900124945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/945/GCA_900124945.1_17138_2_45	-	3688STDY6125006
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93296	51.8	-	CVEH01	67	5139	4744	4/2/15	2/28/17	Scaffold	SC	SAMEA2157298	GCA_001366495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/495/GCA_001366495.1_10540_1_51	-	ct1-107
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13155	39.6	-	FDHQ01	36	2359	2127	2/6/16	3/13/17	Scaffold	SC	SAMEA2382810	GCA_900031905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/905/GCA_900031905.1_12718_4_75	-	2842STDY5753352
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.68311	50.4	-	MOFV01	528	6179	5629	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928876	GCA_001892485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/485/GCA_001892485.1_ASM189248v1	-	606
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.18787	50.5	-	MOFX01	253	5530	5083	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928878	GCA_001892505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/505/GCA_001892505.1_ASM189250v1	-	604
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99309	39.8	-	FDIW01	46	2188	1933	2/6/16	3/6/17	Scaffold	SC	SAMEA2382845	GCA_900031915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/915/GCA_900031915.1_12718_5_15	-	2842STDY5753388
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9312	51.8	-	CGUR01	53	5121	4740	4/21/15	2/28/17	Scaffold	SC	SAMEA2157321	GCA_001366515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/515/GCA_001366515.1_10608_2_60	-	01-2011-005568
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79383	32.7	-	FQEE01	39	2877	2720	11/23/16	3/6/17	Contig	SC	SAMEA3449015	GCA_900124955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/955/GCA_900124955.1_17138_2_46	-	3688STDY6125007
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.70157	32.8	-	FQEF01	37	2787	2611	11/23/16	3/6/17	Contig	SC	SAMEA3449016	GCA_900124965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/965/GCA_900124965.1_17138_2_47	-	3688STDY6125008
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93091	51.8	-	CVEB01	57	5130	4747	4/2/15	2/28/17	Scaffold	SC	SAMEA2157345	GCA_001366535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/535/GCA_001366535.1_10540_1_46	-	ty3-201
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11414	39.6	-	FDMS01	40	2319	2072	2/6/16	3/15/17	Scaffold	SC	SAMEA2382952	GCA_900031925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/925/GCA_900031925.1_12754_1_27	-	2842STDY5753496
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.50272	50.2	-	MOGB01	129	5643	5216	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928882	GCA_001892515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/515/GCA_001892515.1_ASM189251v1	-	600
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.70287	50.5	-	MOGE01	314	6056	5580	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928885	GCA_001892525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/525/GCA_001892525.1_ASM189252v1	-	545
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15799	39.5	-	FDOT01	51	2404	2154	2/9/16	3/13/17	Scaffold	SC	SAMEA2383008	GCA_900031935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/935/GCA_900031935.1_12754_1_83	-	2842STDY5753552
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81689	51.9	-	CVAQ01	55	5010	4636	4/2/15	2/28/17	Scaffold	SC	SAMEA2157577	GCA_001366575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/575/GCA_001366575.1_10426_1_21	-	dn109
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79137	32.7	-	FQEG01	19	2929	2760	11/23/16	3/6/17	Contig	SC	SAMEA3449017	GCA_900124975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/975/GCA_900124975.1_17138_2_48	-	3688STDY6125009
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.78687	32.7	-	FQEN01	23	2938	2776	11/23/16	3/6/17	Contig	SC	SAMEA3449023	GCA_900125045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/045/GCA_900125045.1_17138_2_54	-	3688STDY6125015
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81789	51.9	-	CVDQ01	55	5008	4628	4/2/15	2/28/17	Scaffold	SC	SAMEA2157615	GCA_001366615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/615/GCA_001366615.1_10540_1_41	-	dn148
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05911	39.7	-	FEHQ01	58	2293	2029	2/9/16	3/15/17	Scaffold	SC	SAMEA2383098	GCA_900031945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/945/GCA_900031945.1_12754_2_78	-	2842STDY5753643
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.21847	50.6	-	MOGI01	158	5489	5086	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928889	GCA_001892565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/565/GCA_001892565.1_ASM189256v1	-	479
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.17155	50.6	-	MOGK01	146	5457	5023	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928891	GCA_001892585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/585/GCA_001892585.1_ASM189258v1	-	676
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01403	39.8	-	FEHT01	26	2246	2003	2/9/16	3/13/17	Scaffold	SC	SAMEA2383101	GCA_900031955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/955/GCA_900031955.1_12754_2_81	-	2842STDY5753646
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.03918	51.8	-	CVEG01	56	5256	4870	4/2/15	2/28/17	Scaffold	SC	SAMEA2157674	GCA_001366655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/655/GCA_001366655.1_10540_1_52	-	ty3-205
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.81066	32.7	-	FQEQ01	33	2903	2748	11/23/16	3/6/17	Contig	SC	SAMEA3449026	GCA_900125065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/065/GCA_900125065.1_17138_2_57	-	3688STDY6125018
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.75689	32.8	-	FQER01	17	2882	2712	11/23/16	3/6/17	Contig	SC	SAMEA3449028	GCA_900125075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/075/GCA_900125075.1_17138_2_59	-	3688STDY6125020
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9322	51.8	-	CGQX01	58	5143	4744	4/21/15	2/28/17	Scaffold	SC	SAMEA2157882	GCA_001366695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/695/GCA_001366695.1_10608_2_7	-	2008-012004
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06044	39.5	-	FEIU01	35	2283	2038	2/9/16	3/13/17	Scaffold	SC	SAMEA2383128	GCA_900031965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/965/GCA_900031965.1_12754_3_13	-	2842STDY5753674
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.14597	50.4	-	MOGN01	233	5476	5006	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928894	GCA_001892595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/595/GCA_001892595.1_ASM189259v1	-	554
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.32328	50.5	-	MOGS01	197	5682	5268	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928899	GCA_001892605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/605/GCA_001892605.1_ASM189260v1	-	557
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00121	39.6	-	FELA01	24	2186	1976	2/9/16	3/12/17	Scaffold	SC	SAMEA2383185	GCA_900031975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/975/GCA_900031975.1_12754_3_70	-	2842STDY5753731
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9341	51.8	-	CVEK01	71	5150	4753	4/2/15	2/28/17	Scaffold	SC	SAMEA2157973	GCA_001366715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/715/GCA_001366715.1_10540_1_55	-	ty3-206
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.80139	32.7	-	FQEP01	32	2884	2731	11/23/16	3/8/17	Contig	SC	SAMEA3449027	GCA_900125085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/085/GCA_900125085.1_17138_2_58	-	3688STDY6125019
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79388	32.8	-	FQES01	29	2878	2727	11/23/16	3/6/17	Contig	SC	SAMEA3448975	GCA_900125095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/095/GCA_900125095.1_17138_2_6	-	3688STDY6124965
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.89673	52	-	CGPI01	311	5119	4648	4/21/15	2/28/17	Scaffold	SC	SAMEA2157976	GCA_001366735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/735/GCA_001366735.1_10607_1_93	-	2005-012355
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.03458	39.7	-	FEOY01	23	2261	2015	2/9/16	3/6/17	Scaffold	SC	SAMEA2674672	GCA_900031985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/985/GCA_900031985.1_14412_3_48	-	2842STDY5881931
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.40292	50.7	-	MOGX01	203	5772	5295	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928905	GCA_001892645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/645/GCA_001892645.1_ASM189264v1	-	471
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.63936	50.6	-	MOHD01	173	6000	5564	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928911	GCA_001892665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/665/GCA_001892665.1_ASM189266v1	-	607
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09132	39.6	-	FEPB01	31	2283	2045	2/9/16	3/13/17	Scaffold	SC	SAMEA2674708	GCA_900031995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/995/GCA_900031995.1_14412_3_66	-	2842STDY5881949
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72178	52	-	CVAR01	56	4890	4518	4/2/15	2/28/17	Scaffold	SC	SAMEA2157991	GCA_001366755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/755/GCA_001366755.1_10426_1_24	-	dtc69
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.78926	32.7	-	FQEX01	32	2872	2720	11/23/16	3/6/17	Contig	SC	SAMEA3449032	GCA_900125125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/125/GCA_900125125.1_17138_2_63	-	3688STDY6125024
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.7353	32.7	-	FQEV01	24	2849	2693	11/23/16	3/6/17	Contig	SC	SAMEA3449034	GCA_900125135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/135/GCA_900125135.1_17138_2_65	-	3688STDY6125026
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.88077	51.9	-	CGMO01	75	5079	4705	4/21/15	2/28/17	Scaffold	SC	SAMEA2158027	GCA_001366775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/775/GCA_001366775.1_10561_2_4	-	3671/3
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04014	39.7	-	FEPE01	18	2245	2021	2/9/16	3/13/17	Scaffold	SC	SAMEA2674715	GCA_900032005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/005/GCA_900032005.1_14412_3_70	-	2842STDY5881953
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.5055	50.3	-	MOGZ01	127	5811	5386	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928908	GCA_001892675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/675/GCA_001892675.1_ASM189267v1	-	599
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.39239	50.2	-	MOHL01	154	5598	5189	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928919	GCA_001892685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/685/GCA_001892685.1_ASM189268v1	-	626
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13089	39.6	-	FDVP01	40	2340	2123	2/9/16	3/13/17	Scaffold	SC	SAMEA2238286	GCA_900032145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/145/GCA_900032145.1_11860_4_11	-	2842STDY5643655
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93097	51.8	-	CVCB01	68	5129	4748	4/2/15	2/28/17	Scaffold	SC	SAMEA2158177	GCA_001366795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/795/GCA_001366795.1_10426_1_70	-	ty2-90
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.78453	32.7	-	FQEZ01	20	2920	2745	11/23/16	3/8/17	Contig	SC	SAMEA3449033	GCA_900125145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/145/GCA_900125145.1_17138_2_64	-	3688STDY6125025
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.7454	32.7	-	FQEW01	14	2862	2692	11/23/16	3/6/17	Contig	SC	SAMEA3449035	GCA_900125165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/165/GCA_900125165.1_17138_2_66	-	3688STDY6125027
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93183	51.8	-	CVFN01	72	5136	4750	4/2/15	2/28/17	Scaffold	SC	SAMEA2158228	GCA_001366815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/815/GCA_001366815.1_10540_1_89	-	ty2-141
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06181	39.7	-	FDWR01	44	2269	2020	2/9/16	3/13/17	Scaffold	SC	SAMEA2238336	GCA_900032155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/155/GCA_900032155.1_11860_4_63	-	2842STDY5643705
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.45983	50.3	-	MOHM01	123	5771	5354	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928900	GCA_001892725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/725/GCA_001892725.1_ASM189272v1	-	544
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.17759	50.5	-	MOHP01	132	5457	5054	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928922	GCA_001892745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/745/GCA_001892745.1_ASM189274v1	-	507
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99192	39.8	-	FDWW01	55	2196	1934	2/9/16	3/13/17	Scaffold	SC	SAMEA2238346	GCA_900032165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/165/GCA_900032165.1_11860_4_73	-	2842STDY5643715
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71834	52	-	CGLT01	44	4871	4521	4/21/15	2/28/17	Scaffold	SC	SAMEA2158256	GCA_001366835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/835/GCA_001366835.1_10492_1_5	-	MDUST123
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79934	32.7	-	FQFF01	32	2883	2731	11/23/16	3/6/17	Contig	SC	SAMEA3449043	GCA_900125225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/225/GCA_900125225.1_17138_2_74	-	3688STDY6125035
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.8381	32.8	-	FQFG01	36	2973	2795	11/23/16	3/6/17	Contig	SC	SAMEA3449044	GCA_900125235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/235/GCA_900125235.1_17138_2_75	-	3688STDY6125036
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72618	52	-	CHMH01	41	4888	4538	4/21/15	2/28/17	Scaffold	SC	SAMEA2158295	GCA_001366855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/855/GCA_001366855.1_10607_2_11	-	BKQ1GA
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.97325	39.8	-	FDXD01	32	2181	1932	2/9/16	3/15/17	Scaffold	SC	SAMEA2238356	GCA_900032175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/175/GCA_900032175.1_11860_4_83	-	2842STDY5643725
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.4177	50.2	-	MOHQ01	114	5716	5325	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928923	GCA_001892755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/755/GCA_001892755.1_ASM189275v1	-	503
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.28198	50.5	-	MOHR01	197	5578	5100	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928924	GCA_001892765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/765/GCA_001892765.1_ASM189276v1	-	508
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05909	39.7	-	FDZM01	39	2282	2056	2/9/16	3/13/17	Scaffold	SC	SAMEA2238456	GCA_900032185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/185/GCA_900032185.1_11860_5_86	-	2842STDY5643826
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.68682	52	-	CVLL01	57	4824	4469	4/9/15	2/28/17	Scaffold	SC	SAMEA2158302	GCA_001366875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/875/GCA_001366875.1_10541_2_8	-	MDUST178
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.8448	32.8	-	FQFO01	34	2945	2786	11/23/16	3/8/17	Contig	SC	SAMEA3449053	GCA_900125315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/315/GCA_900125315.1_17138_2_84	-	3688STDY6125045
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.80166	32.7	-	FQFT01	31	2888	2735	11/23/16	3/6/17	Contig	SC	SAMEA3448833	GCA_900125365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/365/GCA_900125365.1_17175_1_28	-	3688STDY6124812
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93269	51.8	-	CVDK01	71	5118	4741	4/2/15	2/28/17	Scaffold	SC	SAMEA2158305	GCA_001366895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/895/GCA_001366895.1_10540_1_20	-	dtc109
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07569	39.5	-	FCUE01	37	2248	2023	2/6/16	3/15/17	Scaffold	SC	SAMEA2238829	GCA_900032195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/195/GCA_900032195.1_11893_1_70	-	2842STDY5644203
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.35934	50.3	-	MOHS01	134	5668	5274	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928925	GCA_001892795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/795/GCA_001892795.1_ASM189279v1	-	654
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.3581	50.3	-	MOHT01	134	5687	5283	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928926	GCA_001892825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/825/GCA_001892825.1_ASM189282v1	-	510
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1284	39.7	-	FCUO01	47	2337	2114	2/6/16	3/5/17	Scaffold	SC	SAMEA2238845	GCA_900032205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/205/GCA_900032205.1_11893_1_86	-	2842STDY5644219
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93124	51.8	-	CVCU01	72	5111	4744	4/2/15	2/28/17	Scaffold	SC	SAMEA2158403	GCA_001366915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/915/GCA_001366915.1_10426_1_96	-	ty2-155
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.75767	32.8	-	FQFV01	19	2897	2745	11/23/16	3/8/17	Contig	SC	SAMEA3448836	GCA_900125385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/385/GCA_900125385.1_17175_1_31	-	3688STDY6124815
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.77747	32.8	-	FQFY01	20	2920	2761	11/23/16	3/8/17	Contig	SC	SAMEA3448840	GCA_900125415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/415/GCA_900125415.1_17175_1_35	-	3688STDY6124819
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71505	52.1	-	CGLZ01	57	4901	4521	4/21/15	2/28/17	Scaffold	SC	SAMEA2158475	GCA_001366935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/935/GCA_001366935.1_10493_1_36	-	MDUST204
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99354	39.8	-	FCVV01	52	2186	1926	2/6/16	3/13/17	Scaffold	SC	SAMEA2238896	GCA_900032215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/215/GCA_900032215.1_11861_3_44	-	2842STDY5644271
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.30025	50.4	-	MOHU01	127	5586	5199	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928927	GCA_001892835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/835/GCA_001892835.1_ASM189283v1	-	582
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.14188	50.7	-	MOHV01	140	5387	4982	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928928	GCA_001892845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/845/GCA_001892845.1_ASM189284v1	-	511
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98131	39.7	-	FCXP01	18	2169	1958	2/6/16	3/13/17	Scaffold	SC	SAMEA2238954	GCA_900032225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/225/GCA_900032225.1_11861_4_5	-	2842STDY5644330
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7398	52.1	-	CVBC01	55	4910	4551	4/2/15	2/28/17	Scaffold	SC	SAMEA2158543	GCA_001366955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/955/GCA_001366955.1_10426_1_37	-	ty2-166
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.80055	32.7	-	FQFZ01	35	2880	2726	11/23/16	3/6/17	Contig	SC	SAMEA3448841	GCA_900125425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/425/GCA_900125425.1_17175_1_36	-	3688STDY6124820
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.77924	32.8	-	FQGA01	14	2941	2795	11/23/16	3/8/17	Contig	SC	SAMEA3448844	GCA_900125445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/445/GCA_900125445.1_17175_1_39	-	3688STDY6124823
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.03062	51.8	-	CVBT01	72	5273	4852	4/2/15	2/28/17	Scaffold	SC	SAMEA2158679	GCA_001366995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/366/995/GCA_001366995.1_10426_1_50	-	ipt76
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06013	39.5	-	FCXS01	39	2273	2030	2/6/16	3/12/17	Scaffold	SC	SAMEA2238961	GCA_900032235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/235/GCA_900032235.1_11861_4_13	-	2842STDY5644337
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.05331	50.5	-	MOHW01	138	5296	4839	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928929	GCA_001892865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/865/GCA_001892865.1_ASM189286v1	-	655
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.05028	50.5	-	MOHZ01	144	5291	4841	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928932	GCA_001892905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/905/GCA_001892905.1_ASM189290v1	-	653
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07438	39.6	-	FDAU01	49	2279	2033	2/6/16	3/13/17	Scaffold	SC	SAMEA2382631	GCA_900032245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/245/GCA_900032245.1_12673_6_86	-	2842STDY5753171
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74185	52.1	-	CGPJ01	48	4919	4557	4/21/15	2/28/17	Scaffold	SC	SAMEA2158718	GCA_001367015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/015/GCA_001367015.1_10607_2_24	-	BKQ4H1
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79305	32.7	-	FQGC01	37	2876	2727	11/23/16	3/6/17	Contig	SC	SAMEA3448846	GCA_900125465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/465/GCA_900125465.1_17175_1_41	-	3688STDY6124825
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.81222	32.7	-	FQGD01	20	2968	2818	11/23/16	3/6/17	Contig	SC	SAMEA3448847	GCA_900125475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/475/GCA_900125475.1_17175_1_42	-	3688STDY6124826
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73759	52	-	CHLO01	58	4898	4538	4/21/15	2/28/17	Scaffold	SC	SAMEA2158747	GCA_001367035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/035/GCA_001367035.1_10493_1_66	-	MDUST300
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06484	39.6	-	FDET01	50	2276	2034	2/6/16	3/13/17	Scaffold	SC	SAMEA2382735	GCA_900032255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/255/GCA_900032255.1_12673_7_95	-	2842STDY5753276
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.18265	50.6	-	MOHY01	206	5479	4981	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928931	GCA_001892935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/935/GCA_001892935.1_ASM189293v1	-	652
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.1398	50.7	-	MOHX01	140	5380	4981	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928930	GCA_001892955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/892/955/GCA_001892955.1_ASM189295v1	-	504
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05996	39.5	-	FDFN01	27	2266	2042	2/6/16	3/5/17	Scaffold	SC	SAMEA2382755	GCA_900032265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/265/GCA_900032265.1_12718_4_20	-	2842STDY5753297
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93227	51.8	-	CVDX01	72	5120	4741	4/2/15	2/28/17	Scaffold	SC	SAMEA2158822	GCA_001367055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/055/GCA_001367055.1_10540_1_39	-	dn21
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.7956	32.7	-	FQGF01	29	2875	2723	11/23/16	3/8/17	Contig	SC	SAMEA3448850	GCA_900125495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/495/GCA_900125495.1_17175_1_45	-	3688STDY6124829
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.75333	32.7	-	FQGH01	15	2865	2699	11/23/16	3/6/17	Contig	SC	SAMEA3448852	GCA_900125505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/505/GCA_900125505.1_17175_1_47	-	3688STDY6124831
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.02981	51.8	-	CVEV01	73	5270	4864	4/2/15	2/28/17	Scaffold	SC	SAMEA2158967	GCA_001367115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/115/GCA_001367115.1_10540_1_67	-	ty3-211
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07336	39.6	-	FDGP01	30	2274	2046	2/6/16	3/13/17	Scaffold	SC	SAMEA2382783	GCA_900032275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/275/GCA_900032275.1_12718_4_48	-	2842STDY5753325
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.39357	50.7	-	MOID01	140	5726	5341	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928936	GCA_001893005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/005/GCA_001893005.1_ASM189300v1	-	590
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.10329	50.7	-	MOIF01	189	5522	4955	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928938	GCA_001893015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/015/GCA_001893015.1_ASM189301v1	-	483
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01704	39.8	-	FDJA01	23	2240	2006	2/6/16	3/6/17	Scaffold	SC	SAMEA2382850	GCA_900032285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/285/GCA_900032285.1_12718_5_20	-	2842STDY5753393
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81816	51.9	-	CVDE01	53	5010	4628	4/2/15	2/28/17	Scaffold	SC	SAMEA2158986	GCA_001367135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/135/GCA_001367135.1_10540_1_26	-	dn174
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.80443	32.7	-	FQGJ01	33	2899	2734	11/23/16	3/6/17	Contig	SC	SAMEA3448855	GCA_900125515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/515/GCA_900125515.1_17175_1_50	-	3688STDY6124834
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.73184	32.7	-	FQGK01	17	2846	2695	11/23/16	3/6/17	Contig	SC	SAMEA3448853	GCA_900125525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/525/GCA_900125525.1_17175_1_48	-	3688STDY6124832
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.02905	51.8	-	CVCM01	71	5243	4850	4/2/15	2/28/17	Scaffold	SC	SAMEA2159064	GCA_001367175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/175/GCA_001367175.1_10426_1_84	-	ty2-132
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00141	39.7	-	FDKW01	37	2201	1991	2/6/16	3/6/17	Scaffold	SC	SAMEA2382901	GCA_900032295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/295/GCA_900032295.1_12718_5_71	-	2842STDY5753444
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.28534	50.5	-	MOIA01	130	5492	5103	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928933	GCA_001893025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/025/GCA_001893025.1_ASM189302v1	-	707
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.06564	50.5	-	MOIK01	311	5312	4888	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928943	GCA_001893035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/035/GCA_001893035.1_ASM189303v1	-	487
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05716	39.6	-	FDLG01	31	2255	2024	2/6/16	3/6/17	Scaffold	SC	SAMEA2382911	GCA_900032305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/305/GCA_900032305.1_12718_5_81	-	2842STDY5753454
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.02814	51.8	-	CVEN01	74	5258	4866	4/2/15	2/28/17	Scaffold	SC	SAMEA2159084	GCA_001367195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/195/GCA_001367195.1_10540_1_59	-	ty3-207
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.73687	32.7	-	FQGM01	14	2859	2701	11/23/16	3/6/17	Contig	SC	SAMEA3448856	GCA_900125555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/555/GCA_900125555.1_17175_1_51	-	3688STDY6124835
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79535	32.7	-	FQGO01	42	2877	2722	11/23/16	3/6/17	Contig	SC	SAMEA3448858	GCA_900125565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/565/GCA_900125565.1_17175_1_53	-	3688STDY6124837
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.85633	52	-	CVAC01	74	5068	4680	4/2/15	2/28/17	Scaffold	SC	SAMEA2159136	GCA_001367215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/215/GCA_001367215.1_10425_1_32	-	dtc111
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98045	39.7	-	FDMX01	26	2173	1956	2/6/16	3/13/17	Scaffold	SC	SAMEA2382957	GCA_900032315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/315/GCA_900032315.1_12754_1_32	-	2842STDY5753501
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	4.73195	50.7	-	MOIC01	199	4956	4516	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928935	GCA_001893085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/085/GCA_001893085.1_ASM189308v1	-	638
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.12441	50.6	-	MOIG01	210	5490	5002	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928939	GCA_001893105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/105/GCA_001893105.1_ASM189310v1	-	484
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10866	39.6	-	FDMY01	28	2314	2087	2/6/16	3/13/17	Scaffold	SC	SAMEA2382958	GCA_900032325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/325/GCA_900032325.1_12754_1_33	-	2842STDY5753502
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93077	51.8	-	CVAT01	73	5129	4742	4/2/15	2/28/17	Scaffold	SC	SAMEA2159363	GCA_001367235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/235/GCA_001367235.1_10426_1_25	-	dn12
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79356	32.7	-	FQGP01	28	2874	2723	11/23/16	3/6/17	Contig	SC	SAMEA3448861	GCA_900125585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/585/GCA_900125585.1_17175_1_56	-	3688STDY6124840
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.82795	32.7	-	FQGQ01	32	2924	2758	11/23/16	3/6/17	Contig	SC	SAMEA3448862	GCA_900125595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/595/GCA_900125595.1_17175_1_57	-	3688STDY6124841
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72252	52	-	CVDN01	59	4884	4511	4/2/15	2/28/17	Scaffold	SC	SAMEA2159366	GCA_001367255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/255/GCA_001367255.1_10540_1_31	-	dn26
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0153	39.7	-	FDPN01	23	2255	2015	2/9/16	3/13/17	Scaffold	SC	SAMEA2383029	GCA_900032335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/335/GCA_900032335.1_12754_2_9	-	2842STDY5753574
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.29496	50.4	-	MOIJ01	347	5582	5171	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928942	GCA_001893125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/125/GCA_001893125.1_ASM189312v1	-	486
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.55535	50.5	-	MOIL01	218	5868	5466	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928944	GCA_001893135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/135/GCA_001893135.1_ASM189313v1	-	559
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0439	39.7	-	FDQG01	36	2256	2033	2/9/16	3/5/17	Scaffold	SC	SAMEA2383048	GCA_900032345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/345/GCA_900032345.1_12754_2_28	-	2842STDY5753593
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72383	52	-	CGTY01	53	4887	4516	4/21/15	2/28/17	Scaffold	SC	SAMEA2159461	GCA_001367275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/275/GCA_001367275.1_10492_1_19	-	MDUST166
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.81293	32.7	-	FQGR01	36	2890	2733	11/23/16	3/8/17	Contig	SC	SAMEA3448864	GCA_900125605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/605/GCA_900125605.1_17175_1_59	-	3688STDY6124843
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.69476	32.7	-	FQGS01	14	2793	2633	11/23/16	3/6/17	Contig	SC	SAMEA3448865	GCA_900125615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/615/GCA_900125615.1_17175_1_60	-	3688STDY6124844
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74307	52.1	-	CEZV01	58	4914	4551	3/10/15	2/28/17	Scaffold	SC	SAMEA2159622	GCA_001367295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/295/GCA_001367295.1_10607_2_25	-	1038377
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01451	39.8	-	FEJE01	21	2251	2010	2/9/16	3/13/17	Scaffold	SC	SAMEA2383138	GCA_900032355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/355/GCA_900032355.1_12754_3_23	-	2842STDY5753684
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.30165	50.5	-	MOIM01	283	5672	5225	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928945	GCA_001893155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/155/GCA_001893155.1_ASM189315v1	-	642
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.16784	50.8	-	MOIN01	152	5411	5030	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928946	GCA_001893165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/165/GCA_001893165.1_ASM189316v1	-	489
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12834	39.7	-	FEKZ01	40	2332	2111	2/9/16	3/13/17	Scaffold	SC	SAMEA2383186	GCA_900032365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/365/GCA_900032365.1_12754_3_71	-	2842STDY5753732
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93369	51.8	-	CVFJ01	68	5148	4750	4/2/15	2/28/17	Scaffold	SC	SAMEA2159648	GCA_001367335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/335/GCA_001367335.1_10540_1_82	-	ipt19
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.73976	32.7	-	FQGX01	17	2868	2708	11/23/16	3/6/17	Contig	SC	SAMEA3448871	GCA_900125665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/665/GCA_900125665.1_17175_1_66	-	3688STDY6124850
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.84442	32.8	-	FQGY01	31	2956	2800	11/23/16	3/6/17	Contig	SC	SAMEA3448873	GCA_900125675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/675/GCA_900125675.1_17175_1_68	-	3688STDY6124852
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71938	52	-	CHLK01	42	4877	4521	4/21/15	2/28/17	Scaffold	SC	SAMEA2159710	GCA_001367355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/355/GCA_001367355.1_10425_1_2	-	np69
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06055	39.5	-	FELK01	37	2276	2043	2/9/16	3/6/17	Scaffold	SC	SAMEA2383196	GCA_900032375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/375/GCA_900032375.1_12754_3_81	-	2842STDY5753742
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.29699	50.5	-	MOIO01	143	5507	5127	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928947	GCA_001893205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/205/GCA_001893205.1_ASM189320v1	-	490
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.14208	50.4	-	MOIP01	158	5430	5019	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928948	GCA_001893215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/215/GCA_001893215.1_ASM189321v1	-	643
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99443	39.7	-	FENI01	20	2196	1976	2/9/16	3/5/17	Scaffold	SC	SAMEA2383248	GCA_900032385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/385/GCA_900032385.1_12754_4_38	-	2842STDY5753795
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.78399	52.1	-	CVLJ01	59	4956	4595	4/9/15	2/28/17	Scaffold	SC	SAMEA2159771	GCA_001367395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/395/GCA_001367395.1_10493_1_10	-	MDUST129
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79618	32.7	-	FQGZ01	31	2879	2726	11/23/16	3/6/17	Contig	SC	SAMEA3448875	GCA_900125685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/685/GCA_900125685.1_17175_1_70	-	3688STDY6124854
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.78295	32.8	-	FQHA01	28	2865	2715	11/23/16	3/8/17	Contig	SC	SAMEA3448876	GCA_900125695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/695/GCA_900125695.1_17175_1_71	-	3688STDY6124855
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.03941	51.8	-	CVCH01	71	5259	4866	4/2/15	2/28/17	Scaffold	SC	SAMEA2159930	GCA_001367415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/415/GCA_001367415.1_10426_1_80	-	ty2-131
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00388	39.7	-	FENU01	39	2215	1986	2/9/16	3/5/17	Scaffold	SC	SAMEA2383260	GCA_900032395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/395/GCA_900032395.1_12754_4_50	-	2842STDY5753807
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.27861	50.4	-	MOIR01	304	5589	5143	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928950	GCA_001893225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/225/GCA_001893225.1_ASM189322v1	-	552
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.33584	50.4	-	MOIS01	329	5688	5156	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928951	GCA_001893245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/245/GCA_001893245.1_ASM189324v1	-	686
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.03106	39.7	-	FEOI01	31	2242	2013	2/9/16	3/15/17	Scaffold	SC	SAMEA2674608	GCA_900032405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/405/GCA_900032405.1_14355_8_81	-	2842STDY5881868
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73554	52.1	-	CGPH01	47	4902	4550	4/21/15	2/28/17	Scaffold	SC	SAMEA2160075	GCA_001367455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/455/GCA_001367455.1_10607_2_30	-	A58452
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.74132	32.7	-	FQHB01	24	2861	2704	11/23/16	3/6/17	Contig	SC	SAMEA3448878	GCA_900125705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/705/GCA_900125705.1_17175_1_73	-	3688STDY6124857
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.794	32.6	-	FQHE01	13	2925	2757	11/23/16	3/6/17	Contig	SC	SAMEA3448880	GCA_900125725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/725/GCA_900125725.1_17175_1_75	-	3688STDY6124859
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93211	51.8	-	CVAY01	67	5127	4748	4/2/15	2/28/17	Scaffold	SC	SAMEA2160278	GCA_001367535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/535/GCA_001367535.1_10426_1_29	-	dn20
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99152	39.7	-	FDRH01	28	2192	1931	2/9/16	3/13/17	Scaffold	SC	SAMEA2239115	GCA_900032765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/765/GCA_900032765.1_11860_7_76	-	2842STDY5644496
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	4.92552	50.8	-	MOIT01	131	5160	4779	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928952	GCA_001893285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/285/GCA_001893285.1_ASM189328v1	-	644
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.10126	50.5	-	MOIE01	168	5389	4974	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928937	GCA_001893305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/305/GCA_001893305.1_ASM189330v1	-	639
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99103	39.8	-	FDVI01	41	2176	1939	2/9/16	3/13/17	Scaffold	SC	SAMEA2239301	GCA_900032775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/775/GCA_900032775.1_11861_5_76	-	2842STDY5644685
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74185	52.1	-	CGQE01	50	4898	4544	4/21/15	2/28/17	Scaffold	SC	SAMEA2160515	GCA_001367555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/555/GCA_001367555.1_10607_2_36	-	1036491
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.7259	32.7	-	FQHD01	20	2848	2688	11/23/16	3/6/17	Contig	SC	SAMEA3448881	GCA_900125735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/735/GCA_900125735.1_17175_1_76	-	3688STDY6124860
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.77755	32.7	-	FQHG01	23	2913	2762	11/23/16	3/6/17	Contig	SC	SAMEA3449398	GCA_900125775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/775/GCA_900125775.1_17175_1_79	-	3688STDY6124863
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72228	52	-	CVDD01	59	4887	4515	4/2/15	2/28/17	Scaffold	SC	SAMEA2160550	GCA_001367575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/575/GCA_001367575.1_10540_1_21	-	dn38
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98658	39.8	-	FDXS01	44	2179	1921	2/9/16	3/13/17	Scaffold	SC	SAMEA2238375	GCA_900032785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/785/GCA_900032785.1_11860_5_5	-	2842STDY5643745
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.00086	50.7	-	MOIB01	203	5337	4812	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928934	GCA_001893315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/315/GCA_001893315.1_ASM189331v1	-	637
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.34726	50.3	-	MOIH01	129	5679	5269	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928940	GCA_001893345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/345/GCA_001893345.1_ASM189334v1	-	683
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1267	39.6	-	FDZB01	35	2343	2099	2/9/16	3/5/17	Scaffold	SC	SAMEA2238435	GCA_900032795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/795/GCA_900032795.1_11860_5_66	-	2842STDY5643805
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93279	51.8	-	CVFZ01	70	5125	4741	4/2/15	2/28/17	Scaffold	SC	SAMEA2160578	GCA_001367595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/595/GCA_001367595.1_10561_2_69	-	dn88
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.77826	32.8	-	FQHK01	22	2928	2772	11/23/16	3/6/17	Contig	SC	SAMEA3449401	GCA_900125795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/795/GCA_900125795.1_17175_1_82	-	3688STDY6124866
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.72112	32.7	-	FQHL01	19	2823	2657	11/23/16	3/6/17	Contig	SC	SAMEA3449403	GCA_900125805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/805/GCA_900125805.1_17175_1_84	-	3688STDY6124868
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73266	52	-	CGTV01	57	4892	4542	4/21/15	2/28/17	Scaffold	SC	SAMEA2160625	GCA_001367635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/635/GCA_001367635.1_10493_1_47	-	MDUST246
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06358	39.7	-	FECD01	23	2271	2046	2/9/16	3/13/17	Scaffold	SC	SAMEA2238575	GCA_900032805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/805/GCA_900032805.1_11861_1_13	-	2842STDY5643947
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.22469	50.6	-	MOIU01	204	5590	5073	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928953	GCA_001893365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/365/GCA_001893365.1_ASM189336v1	-	492
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	4.90543	50.7	-	MOIQ01	189	5156	4762	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928949	GCA_001893375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/375/GCA_001893375.1_ASM189337v1	-	491
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0152	39.8	-	FECV01	25	2254	2013	2/9/16	3/13/17	Scaffold	SC	SAMEA2238605	GCA_900032815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/815/GCA_900032815.1_11861_1_42	-	2842STDY5643977
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93394	51.8	-	CVDT01	77	5133	4736	4/2/15	2/28/17	Scaffold	SC	SAMEA2160707	GCA_001367655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/655/GCA_001367655.1_10540_1_24	-	dn67
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.68753	32.7	-	FQHN01	20	2782	2616	11/23/16	3/8/17	Contig	SC	SAMEA3449405	GCA_900125825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/825/GCA_900125825.1_17175_1_86	-	3688STDY6124870
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79717	32.7	-	FQHQ01	29	2876	2725	11/23/16	3/6/17	Contig	SC	SAMEA3448896	GCA_900125855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/855/GCA_900125855.1_17175_2_14	-	3688STDY6124885
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72978	52	-	CGUM01	40	4885	4536	4/21/15	2/28/17	Scaffold	SC	SAMEA2160711	GCA_001367675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/675/GCA_001367675.1_10607_2_3	-	A57501
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00184	39.7	-	FCTA01	41	2216	1988	2/6/16	3/5/17	Scaffold	SC	SAMEA2239103	GCA_900032825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/825/GCA_900032825.1_11860_7_64	-	2842STDY5644484
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.06648	50.4	-	MOII01	172	5403	4936	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928941	GCA_001893385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/385/GCA_001893385.1_ASM189338v1	-	640
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	4.74566	50.8	-	MOIY01	129	4943	4547	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928957	GCA_001893395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/395/GCA_001893395.1_ASM189339v1	-	681
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05266	39.8	-	FCUD01	23	2315	2073	2/6/16	3/6/17	Scaffold	SC	SAMEA2238828	GCA_900032835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/835/GCA_900032835.1_11893_1_69	-	2842STDY5644202
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9339	51.8	-	CVCQ01	71	5135	4741	4/2/15	2/28/17	Scaffold	SC	SAMEA2160840	GCA_001367715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/715/GCA_001367715.1_10426_1_92	-	ty2-103
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.84268	32.8	-	FQHR01	35	2947	2791	11/23/16	3/8/17	Contig	SC	SAMEA3448897	GCA_900125865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/865/GCA_900125865.1_17175_2_15	-	3688STDY6124886
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.7757	32.8	-	FQHS01	22	2904	2728	11/23/16	3/6/17	Contig	SC	SAMEA3448899	GCA_900125875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/875/GCA_900125875.1_17175_2_17	-	3688STDY6124888
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72288	52	-	CVCW01	43	4890	4513	4/2/15	2/28/17	Scaffold	SC	SAMEA2160900	GCA_001367735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/735/GCA_001367735.1_10540_1_17	-	dtc76
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.97289	39.7	-	FCUK01	23	2171	1934	2/6/16	3/6/17	Scaffold	SC	SAMEA2238836	GCA_900032845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/845/GCA_900032845.1_11893_1_77	-	2842STDY5644210
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.28717	50.5	-	MOIZ01	136	5480	5098	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928958	GCA_001893445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/445/GCA_001893445.1_ASM189344v1	-	494
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.54708	50.3	-	MOJC01	369	5893	5429	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928961	GCA_001893455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/455/GCA_001893455.1_ASM189345v1	-	496
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06595	39.5	-	FCYC01	29	2245	2020	2/6/16	3/13/17	Scaffold	SC	SAMEA2382598	GCA_900032855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/855/GCA_900032855.1_12673_6_53	-	2842STDY5753138
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7808	52.1	-	CGTO01	72	4967	4596	4/21/15	2/28/17	Scaffold	SC	SAMEA2161089	GCA_001367795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/795/GCA_001367795.1_10425_1_5	-	np45
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.83414	32.6	-	FQHT01	11	2987	2815	11/23/16	3/6/17	Contig	SC	SAMEA3448900	GCA_900125885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/885/GCA_900125885.1_17175_2_18	-	3688STDY6124889
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.73493	32.7	-	FQHU01	35	2799	2642	11/23/16	3/6/17	Contig	SC	SAMEA3448901	GCA_900125895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/895/GCA_900125895.1_17175_2_19	-	3688STDY6124890
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93135	51.8	-	CVFP01	72	5128	4749	4/2/15	2/28/17	Scaffold	SC	SAMEA2161134	GCA_001367815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/815/GCA_001367815.1_10540_1_91	-	ty2-113
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.97703	39.7	-	FCYJ01	20	2176	1937	2/6/16	3/15/17	Scaffold	SC	SAMEA2382605	GCA_900032865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/865/GCA_900032865.1_12673_6_60	-	2842STDY5753145
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	4.83486	50.7	-	MOJG01	98	5049	4705	12/8/16	2/25/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928965	GCA_001893465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/465/GCA_001893465.1_ASM189346v1	-	116
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	4.97851	50.8	-	MOJH01	182	5262	4807	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928966	GCA_001893475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/475/GCA_001893475.1_ASM189347v1	-	633
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0048	39.8	-	FDCQ01	25	2236	1995	2/6/16	3/13/17	Scaffold	SC	SAMEA2382679	GCA_900032875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/875/GCA_900032875.1_12673_7_39	-	2842STDY5753220
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.02994	51.8	-	CVER01	71	5254	4850	4/2/15	2/28/17	Scaffold	SC	SAMEA2161140	GCA_001367835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/835/GCA_001367835.1_10540_1_62	-	as118
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79937	32.7	-	FQHV01	31	2886	2732	11/23/16	3/6/17	Contig	SC	SAMEA3448884	GCA_900125905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/905/GCA_900125905.1_17175_2_2	-	3688STDY6124873
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.74833	32.7	-	FQHW01	16	2877	2723	11/23/16	3/6/17	Contig	SC	SAMEA3448906	GCA_900125915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/915/GCA_900125915.1_17175_2_24	-	3688STDY6124895
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93236	51.8	-	CVDY01	73	5127	4742	4/2/15	2/28/17	Scaffold	SC	SAMEA2161315	GCA_001367875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/875/GCA_001367875.1_10540_1_43	-	dn123
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09382	39.6	-	FDCY01	22	2296	2067	2/6/16	3/13/17	Scaffold	SC	SAMEA2382687	GCA_900032885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/885/GCA_900032885.1_12673_7_47	-	2842STDY5753228
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.32602	50.5	-	MOJP01	169	5539	5146	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928974	GCA_001893525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/525/GCA_001893525.1_ASM189352v1	-	601
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.36229	50.2	-	MOJT01	124	5560	5171	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928978	GCA_001893535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/535/GCA_001893535.1_ASM189353v1	-	648
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11963	39.6	-	FDES01	68	2379	2118	2/6/16	3/13/17	Scaffold	SC	SAMEA2382734	GCA_900032895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/895/GCA_900032895.1_12673_7_94	-	2842STDY5753275
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7645	51.9	-	CFAC01	54	4925	4564	3/13/15	2/28/17	Scaffold	SC	SAMEA2161490	GCA_001367895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/895/GCA_001367895.1_10492_1_86	-	MDUST418
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.6781	32.7	-	FQNE01	9	2772	2612	11/24/16	3/8/17	Contig	SC	SAMEA3448908	GCA_900125925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/925/GCA_900125925.1_17175_2_26	-	3688STDY6124897
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.70974	32.7	-	FQHY01	24	2801	2639	11/23/16	3/6/17	Contig	SC	SAMEA3448910	GCA_900125945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/945/GCA_900125945.1_17175_2_28	-	3688STDY6124899
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9313	51.8	-	CVGL01	55	5133	4746	4/2/15	2/28/17	Scaffold	SC	SAMEA2161555	GCA_001367935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/935/GCA_001367935.1_10561_2_84	-	ty1-48
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0639	39.6	-	FDGR01	49	2237	2010	2/6/16	3/5/17	Scaffold	SC	SAMEA2382785	GCA_900032905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/905/GCA_900032905.1_12718_4_50	-	2842STDY5753327
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.02432	50.5	-	MOJV01	175	5335	4838	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928980	GCA_001893545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/545/GCA_001893545.1_ASM189354v1	-	658
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	4.85176	50.5	-	MOJY01	134	5123	4721	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928982	GCA_001893555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/555/GCA_001893555.1_ASM189355v1	-	660
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08531	39.5	-	FDJV01	60	2316	2037	2/6/16	3/13/17	Scaffold	SC	SAMEA2382874	GCA_900032915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/915/GCA_900032915.1_12718_5_44	-	2842STDY5753417
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93282	51.8	-	CVBZ01	68	5135	4736	4/2/15	2/28/17	Scaffold	SC	SAMEA2161583	GCA_001367955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/955/GCA_001367955.1_10426_1_67	-	ty2-76
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.80888	32.7	-	FQHZ01	30	2893	2739	11/23/16	3/6/17	Contig	SC	SAMEA3448911	GCA_900125955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/955/GCA_900125955.1_17175_2_29	-	3688STDY6124900
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79465	32.8	-	FQIA01	31	2870	2716	11/23/16	3/6/17	Contig	SC	SAMEA3448885	GCA_900125965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/965/GCA_900125965.1_17175_2_3	-	3688STDY6124874
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.76474	52.1	-	CVAL01	71	4936	4574	4/2/15	2/28/17	Scaffold	SC	SAMEA2161670	GCA_001367975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/975/GCA_001367975.1_10426_1_15	-	dn110
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08268	39.7	-	FDLL01	32	2284	2035	2/6/16	3/13/17	Scaffold	SC	SAMEA2382916	GCA_900032925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/925/GCA_900032925.1_12718_5_86	-	2842STDY5753459
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.0753	50.6	-	MOJZ01	116	5397	5015	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928984	GCA_001893605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/605/GCA_001893605.1_ASM189360v1	-	680
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.54063	50.8	-	MOKB01	256	5940	5413	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928986	GCA_001893615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/615/GCA_001893615.1_ASM189361v1	-	709
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06997	39.6	-	FDOI01	28	2305	2067	2/6/16	3/13/17	Scaffold	SC	SAMEA2382997	GCA_900032935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/935/GCA_900032935.1_12754_1_72	-	2842STDY5753541
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9298	51.8	-	CGPK01	53	5122	4751	4/21/15	2/28/17	Scaffold	SC	SAMEA2161693	GCA_001367995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/367/995/GCA_001367995.1_10607_1_44	-	2008-007824
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.73918	32.7	-	FQID01	14	2844	2673	11/23/16	3/6/17	Contig	SC	SAMEA3448914	GCA_900125995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/995/GCA_900125995.1_17175_2_32	-	3688STDY6124903
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.7052	32.8	-	FQIH01	33	2773	2616	11/23/16	3/6/17	Contig	SC	SAMEA3448918	GCA_900126035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/035/GCA_900126035.1_17175_2_36	-	3688STDY6124908
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71992	52	-	CGUH01	54	4871	4518	4/21/15	2/28/17	Scaffold	SC	SAMEA2161743	GCA_001368015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/015/GCA_001368015.1_10561_2_18	-	H12ESR01052-001A
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08246	39.6	-	FDPD01	37	2250	2025	2/6/16	3/13/17	Scaffold	SC	SAMEA2383019	GCA_900032945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/945/GCA_900032945.1_12754_1_94	-	2842STDY5753563
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.70206	50.5	-	MOKA01	210	5941	5434	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928985	GCA_001893625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/625/GCA_001893625.1_ASM189362v1	-	675
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.58798	50.4	-	MOKD01	219	5872	5326	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928988	GCA_001893635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/635/GCA_001893635.1_ASM189363v1	-	679
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15565	39.5	-	FDPF01	72	2360	2096	2/9/16	3/13/17	Scaffold	SC	SAMEA2383021	GCA_900032955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/955/GCA_900032955.1_12754_2_1	-	2842STDY5753566
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71922	52	-	CGMT01	58	4889	4522	4/21/15	2/28/17	Scaffold	SC	SAMEA2161894	GCA_001368035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/035/GCA_001368035.1_10561_2_42	-	H12ESR04732-001A
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.81277	32.7	-	FQII01	13	2957	2797	11/23/16	3/8/17	Contig	SC	SAMEA3448920	GCA_900126045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/045/GCA_900126045.1_17175_2_38	-	3688STDY6124910
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.75045	32.7	-	FQIM01	20	2897	2720	11/23/16	3/6/17	Contig	SC	SAMEA3448922	GCA_900126075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/075/GCA_900126075.1_17175_2_40	-	3688STDY6124912
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9318	51.8	-	CVDW01	72	5130	4750	4/2/15	2/28/17	Scaffold	SC	SAMEA2161919	GCA_001368055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/055/GCA_001368055.1_10540_1_38	-	dtc80
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02194	39.7	-	FEFZ01	20	2206	1983	2/9/16	3/13/17	Scaffold	SC	SAMEA2383055	GCA_900032965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/965/GCA_900032965.1_12754_2_35	-	2842STDY5753600
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.54553	50.7	-	MOKG01	161	5814	5305	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928991	GCA_001893685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/685/GCA_001893685.1_ASM189368v1	-	716
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.54055	50.2	-	MOKK01	182	5809	5386	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928995	GCA_001893695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/695/GCA_001893695.1_ASM189369v1	-	613
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04435	39.5	-	FEGE01	28	2252	2029	2/9/16	3/13/17	Scaffold	SC	SAMEA2383060	GCA_900032975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/975/GCA_900032975.1_12754_2_40	-	2842STDY5753605
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73948	52.1	-	CVBF01	52	4911	4555	4/2/15	2/28/17	Scaffold	SC	SAMEA2162176	GCA_001368095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/095/GCA_001368095.1_10426_1_54	-	as257
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.7932	32.7	-	FQIL01	18	2914	2767	11/23/16	3/6/17	Contig	SC	SAMEA3448923	GCA_900126085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/085/GCA_900126085.1_17175_2_41	-	3688STDY6124913
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.75595	32.7	-	FQIN01	14	2860	2707	11/23/16	3/6/17	Contig	SC	SAMEA3448924	GCA_900126095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/095/GCA_900126095.1_17175_2_42	-	3688STDY6124914
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93271	51.8	-	CVCD01	69	5131	4743	4/2/15	2/28/17	Scaffold	SC	SAMEA2162224	GCA_001368135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/135/GCA_001368135.1_10426_1_72	-	ty2-123
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07123	39.6	-	FEHS01	32	2318	2072	2/9/16	3/13/17	Scaffold	SC	SAMEA2383100	GCA_900032985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/985/GCA_900032985.1_12754_2_80	-	2842STDY5753645
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.54188	50.6	-	MOKH01	157	5800	5319	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928992	GCA_001893705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/705/GCA_001893705.1_ASM189370v1	-	715
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.32864	50.3	-	MOKL01	143	5560	5215	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928996	GCA_001893715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/715/GCA_001893715.1_ASM189371v1	-	614
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0544	39.6	-	FEIJ01	28	2271	2030	2/9/16	3/5/17	Scaffold	SC	SAMEA2383117	GCA_900032995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/032/995/GCA_900032995.1_12754_3_2	-	2842STDY5753663
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.76252	52	-	CFAS01	63	4931	4559	3/9/15	2/28/17	Scaffold	SC	SAMEA2162345	GCA_001368155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/155/GCA_001368155.1_10562_2_82	-	MDUST413
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.71206	32.7	-	FQIO01	19	2811	2664	11/23/16	3/6/17	Contig	SC	SAMEA3448925	GCA_900126105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/105/GCA_900126105.1_17175_2_43	-	3688STDY6124915
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79237	32.7	-	FQIQ01	34	2879	2725	11/23/16	3/6/17	Contig	SC	SAMEA3448929	GCA_900126125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/125/GCA_900126125.1_17175_2_47	-	3688STDY6124919
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93296	51.8	-	CVBW01	70	5140	4736	4/2/15	2/28/17	Scaffold	SC	SAMEA2162433	GCA_001368175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/175/GCA_001368175.1_10426_1_62	-	ct1-33
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05121	39.6	-	FEIX01	27	2254	2015	2/9/16	3/5/17	Scaffold	SC	SAMEA2383131	GCA_900033005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/005/GCA_900033005.1_12754_3_16	-	2842STDY5753677
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.49006	50.3	-	MOKQ01	511	5809	5295	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05929001	GCA_001893765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/765/GCA_001893765.1_ASM189376v1	-	684
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	4.86441	50.6	-	MOKT01	116	5050	4672	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05929004	GCA_001893775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/775/GCA_001893775.1_ASM189377v1	-	711
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.97751	39.8	-	FEJR01	29	2176	1944	2/9/16	3/15/17	Scaffold	SC	SAMEA2383151	GCA_900033015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/015/GCA_900033015.1_12754_3_36	-	2842STDY5753697
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73638	52	-	CGUB01	67	4898	4524	4/21/15	2/28/17	Scaffold	SC	SAMEA2162457	GCA_001368195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/195/GCA_001368195.1_10561_2_10	-	np95
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.68007	32.7	-	FQND01	8	2775	2611	11/24/16	3/9/17	Contig	SC	SAMEA3448931	GCA_900126145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/145/GCA_900126145.1_17175_2_49	-	3688STDY6124921
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.75761	32.7	-	FQIS01	15	2856	2709	11/23/16	3/6/17	Contig	SC	SAMEA3448932	GCA_900126155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/155/GCA_900126155.1_17175_2_50	-	3688STDY6124922
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.71116	52.1	-	CGLU01	58	4882	4540	4/21/15	2/28/17	Scaffold	SC	SAMEA2162537	GCA_001368215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/215/GCA_001368215.1_10492_1_29	-	MDUST206
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02055	39.7	-	FEKF01	27	2216	1987	2/9/16	3/13/17	Scaffold	SC	SAMEA2383165	GCA_900033025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/025/GCA_900033025.1_12754_3_50	-	2842STDY5753711
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	4.92266	50.8	-	MOKR01	123	5143	4785	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05929002	GCA_001893785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/785/GCA_001893785.1_ASM189378v1	-	515
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.40207	50.5	-	MOLG01	109	5562	5203	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05929017	GCA_001893845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/845/GCA_001893845.1_ASM189384v1	-	720
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98055	39.7	-	FEMY01	19	2177	1962	2/9/16	3/13/17	Scaffold	SC	SAMEA2383238	GCA_900033035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/035/GCA_900033035.1_12754_4_28	-	2842STDY5753785
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.81902	51.9	-	CVDL01	61	5010	4619	4/2/15	2/28/17	Scaffold	SC	SAMEA2162690	GCA_001368235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/235/GCA_001368235.1_10540_1_30	-	dn113
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.77312	32.7	-	FQIT01	35	2885	2745	11/23/16	3/6/17	Contig	SC	SAMEA3448933	GCA_900126165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/165/GCA_900126165.1_17175_2_51	-	3688STDY6124923
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.66314	32.8	-	FQIU01	14	2728	2569	11/23/16	3/6/17	Contig	SC	SAMEA3448934	GCA_900126175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/175/GCA_900126175.1_17175_2_52	-	3688STDY6124924
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.69009	52.1	-	CVFB01	59	4832	4477	4/2/15	2/28/17	Scaffold	SC	SAMEA2162725	GCA_001368275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/275/GCA_001368275.1_10540_1_77	-	ty3-213
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.134	39.5	-	FEND01	33	2366	2129	2/9/16	3/13/17	Scaffold	SC	SAMEA2383243	GCA_900033045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/045/GCA_900033045.1_12754_4_33	-	2842STDY5753790
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	4.30525	50.4	-	MOLI01	94	4507	4216	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05929019	GCA_001893865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/865/GCA_001893865.1_ASM189386v1	-	Ec-03
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	4.96912	50.7	-	MOIV01	306	5319	4783	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928954	GCA_001893875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/875/GCA_001893875.1_ASM189387v1	-	645
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13527	39.7	-	FEOO01	54	2373	2124	2/9/16	3/13/17	Scaffold	SC	SAMEA2674632	GCA_900033055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/055/GCA_900033055.1_14412_3_10	-	2842STDY5881892
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93312	51.8	-	CVCG01	72	5125	4739	4/2/15	2/28/17	Scaffold	SC	SAMEA2162783	GCA_001368295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/295/GCA_001368295.1_10426_1_78	-	ty2-100
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.75387	32.7	-	FQIV01	15	2884	2722	11/23/16	3/6/17	Contig	SC	SAMEA3448936	GCA_900126195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/195/GCA_900126195.1_17175_2_54	-	3688STDY6124926
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.7959	32.7	-	FQJA01	29	2879	2725	11/23/16	3/6/17	Contig	SC	SAMEA3448941	GCA_900126235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/235/GCA_900126235.1_17175_2_59	-	3688STDY6124931
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93204	51.8	-	CVCC01	67	5128	4739	4/2/15	2/28/17	Scaffold	SC	SAMEA2162885	GCA_001368315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/315/GCA_001368315.1_10426_1_71	-	ty2-139
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99167	39.8	-	FDTK01	50	2193	1933	2/9/16	3/6/17	Scaffold	SC	SAMEA2239221	GCA_900033425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/425/GCA_900033425.1_11860_8_89	-	2842STDY5644603
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	4.96912	50.7	-	MOIW01	306	5319	4783	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928955	GCA_001893905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/905/GCA_001893905.1_ASM189390v1	-	555
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.49318	50.5	-	MOJA01	341	5909	5439	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928959	GCA_001893915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/915/GCA_001893915.1_ASM189391v1	-	549
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99106	39.7	-	FDTO01	22	2193	1969	2/9/16	3/13/17	Scaffold	SC	SAMEA2239226	GCA_900033435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/435/GCA_900033435.1_11860_8_94	-	2842STDY5644609
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	5.02717	51.8	-	CVFG01	78	5255	4868	4/2/15	2/28/17	Scaffold	SC	SAMEA2162900	GCA_001368335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/335/GCA_001368335.1_10540_1_73	-	ty3-196
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.78932	32.7	-	FQJE01	23	2964	2780	11/23/16	3/6/17	Contig	SC	SAMEA3448944	GCA_900126275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/275/GCA_900126275.1_17175_2_62	-	3688STDY6124934
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79655	32.7	-	FQJG01	32	2885	2730	11/23/16	3/6/17	Contig	SC	SAMEA3448946	GCA_900126295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/295/GCA_900126295.1_17175_2_64	-	3688STDY6124936
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.74704	52.1	-	CGMM01	62	4908	4548	4/21/15	2/28/17	Scaffold	SC	SAMEA2162938	GCA_001368355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/355/GCA_001368355.1_10541_2_50	-	MDUST341
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10764	39.7	-	FCRR01	54	2338	2080	2/6/16	3/13/17	Scaffold	SC	SAMEA2239020	GCA_900033445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/445/GCA_900033445.1_11861_4_74	-	2842STDY5644398
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	4.81825	51	-	MOJD01	145	5093	4672	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928962	GCA_001893935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/935/GCA_001893935.1_ASM189393v1	-	497
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.28731	50.5	-	MOJF01	127	5486	5116	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928964	GCA_001893955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/955/GCA_001893955.1_ASM189395v1	-	598
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11687	39.6	-	FCTB01	45	2376	2105	2/6/16	3/13/17	Scaffold	SC	SAMEA2239104	GCA_900033455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/455/GCA_900033455.1_11860_7_65	-	2842STDY5644485
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.92943	51.8	-	CGOH01	55	5124	4735	4/21/15	2/28/17	Scaffold	SC	SAMEA2163031	GCA_001368375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/375/GCA_001368375.1_10607_1_48	-	2009-019983
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	3.04541	32.6	-	FQJI01	52	3201	3044	11/23/16	3/6/17	Contig	SC	SAMEA3448948	GCA_900126315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/315/GCA_900126315.1_17175_2_66	-	3688STDY6124938
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79865	32.7	-	FQJL01	29	2877	2724	11/23/16	3/6/17	Contig	SC	SAMEA3448889	GCA_900126335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/335/GCA_900126335.1_17175_2_7	-	3688STDY6124878
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93193	51.8	-	CGPC01	58	5136	4752	4/21/15	2/28/17	Scaffold	SC	SAMEA2163049	GCA_001368395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/395/GCA_001368395.1_10607_1_83	-	2011-019645
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99201	39.7	-	FDAH01	38	2198	1981	2/6/16	3/13/17	Scaffold	SC	SAMEA2382616	GCA_900033465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/465/GCA_900033465.1_12673_6_71	-	2842STDY5753156
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.17922	50.6	-	MOJK01	126	5428	5052	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928969	GCA_001893985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/985/GCA_001893985.1_ASM189398v1	-	469
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.15776	50.4	-	MOJM01	179	5451	5026	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928971	GCA_001893995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/995/GCA_001893995.1_ASM189399v1	-	602
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98761	39.7	-	FDAX01	23	2200	1962	2/6/16	3/13/17	Scaffold	SC	SAMEA2382634	GCA_900033475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/475/GCA_900033475.1_12673_6_89	-	2842STDY5753174
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72127	52	-	CGMX01	57	4883	4522	4/21/15	2/28/17	Scaffold	SC	SAMEA2163050	GCA_001368415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/415/GCA_001368415.1_10562_2_81	-	MDUST409
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.786	32.7	-	FQJK01	20	2946	2772	11/23/16	3/6/17	Contig	SC	SAMEA3448952	GCA_900126345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/345/GCA_900126345.1_17175_2_70	-	3688STDY6124942
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79882	32.7	-	FQJM01	29	2879	2726	11/23/16	3/6/17	Contig	SC	SAMEA3448953	GCA_900126355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/355/GCA_900126355.1_17175_2_71	-	3688STDY6124943
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93241	51.8	-	CVCJ01	75	5120	4747	4/2/15	2/28/17	Scaffold	SC	SAMEA2163229	GCA_001368435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/435/GCA_001368435.1_10426_1_81	-	ty2-71
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07383	39.6	-	FDBT01	42	2264	2041	2/6/16	3/13/17	Scaffold	SC	SAMEA2382656	GCA_900033485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/485/GCA_900033485.1_12673_7_16	-	2842STDY5753197
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	4.89797	50.7	-	MOJO01	161	5166	4766	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928972	GCA_001894025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/025/GCA_001894025.1_ASM189402v1	-	500
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	4.87578	50.7	-	MOJQ01	149	5152	4739	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928975	GCA_001894035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/035/GCA_001894035.1_ASM189403v1	-	646
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07103	39.6	-	FDDJ01	45	2277	2022	2/6/16	3/13/17	Scaffold	SC	SAMEA2382698	GCA_900033495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/495/GCA_900033495.1_12673_7_58	-	2842STDY5753239
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93155	51.8	-	CVCK01	68	5119	4743	4/2/15	2/28/17	Scaffold	SC	SAMEA2163241	GCA_001368455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/455/GCA_001368455.1_10426_1_82	-	ty2-101
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.71943	32.7	-	FQJN01	19	2835	2680	11/23/16	3/6/17	Contig	SC	SAMEA3448954	GCA_900126365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/365/GCA_900126365.1_17175_2_72	-	3688STDY6124944
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79616	32.7	-	FQJO01	31	2875	2729	11/23/16	3/6/17	Contig	SC	SAMEA3448956	GCA_900126385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/385/GCA_900126385.1_17175_2_74	-	3688STDY6124946
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72404	52	-	CVFY01	57	4894	4525	4/2/15	2/28/17	Scaffold	SC	SAMEA2163300	GCA_001368475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/475/GCA_001368475.1_10561_2_68	-	dtc98
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99505	39.8	-	FDFI01	46	2188	1935	2/6/16	3/13/17	Scaffold	SC	SAMEA2382750	GCA_900033505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/505/GCA_900033505.1_12718_4_15	-	2842STDY5753292
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	4.87975	50.7	-	MOJS01	157	5168	4743	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928977	GCA_001894065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/065/GCA_001894065.1_ASM189406v1	-	502
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.12453	50.7	-	MOJU01	143	5362	4997	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928979	GCA_001894075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/075/GCA_001894075.1_ASM189407v1	-	571
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06631	39.6	-	FDGC01	42	2256	1996	2/6/16	3/13/17	Scaffold	SC	SAMEA2382770	GCA_900033515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/515/GCA_900033515.1_12718_4_35	-	2842STDY5753312
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93104	51.8	-	CVCV01	53	5125	4750	4/2/15	2/28/17	Scaffold	SC	SAMEA2163346	GCA_001368495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/495/GCA_001368495.1_10540_1_14	-	dtc81
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.69567	32.7	-	FQJQ01	20	2794	2645	11/23/16	3/6/17	Contig	SC	SAMEA3448957	GCA_900126395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/395/GCA_900126395.1_17175_2_75	-	3688STDY6124947
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79369	32.7	-	FQJR01	29	2880	2730	11/23/16	3/6/17	Contig	SC	SAMEA3448959	GCA_900126405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/405/GCA_900126405.1_17175_2_77	-	3688STDY6124949
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.72912	52	-	CEXU01	47	4892	4538	3/10/15	2/28/17	Scaffold	SC	SAMEA2163418	GCA_001368515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/515/GCA_001368515.1_10607_2_41	-	A59307
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15196	39.6	-	FDHS01	48	2376	2128	2/6/16	3/15/17	Scaffold	SC	SAMEA2382812	GCA_900033525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/525/GCA_900033525.1_12718_4_77	-	2842STDY5753354
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	4.87589	50.7	-	MOKC01	160	5152	4711	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928987	GCA_001894085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/085/GCA_001894085.1_ASM189408v1	-	682
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.29382	50.5	-	MOKE01	142	5652	5248	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928989	GCA_001894125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/125/GCA_001894125.1_ASM189412v1	-	713
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11258	39.5	-	FDIB01	38	2319	2066	2/6/16	3/13/17	Scaffold	SC	SAMEA2382821	GCA_900033535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/535/GCA_900033535.1_12718_4_86	-	2842STDY5753363
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93266	51.8	-	CVAI01	68	5138	4746	4/2/15	2/28/17	Scaffold	SC	SAMEA2163421	GCA_001368535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/535/GCA_001368535.1_10426_1_12	-	dn45
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.81478	32.6	-	FQJS01	12	2927	2767	11/23/16	3/6/17	Contig	SC	SAMEA3448890	GCA_900126415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/415/GCA_900126415.1_17175_2_8	-	3688STDY6124879
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79014	32.7	-	FQJT01	32	2873	2719	11/23/16	3/6/17	Contig	SC	SAMEA3448962	GCA_900126425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/425/GCA_900126425.1_17175_2_80	-	3688STDY6124952
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.73656	52	-	CGMH01	59	4897	4542	4/21/15	2/28/17	Scaffold	SC	SAMEA2163433	GCA_001368555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/555/GCA_001368555.1_10493_1_62	-	MDUST296
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11401	39.6	-	FDMV01	64	2331	2059	2/6/16	3/13/17	Scaffold	SC	SAMEA2382955	GCA_900033545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/545/GCA_900033545.1_12754_1_30	-	2842STDY5753499
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.82769	50.1	-	MOKJ01	440	6230	5674	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928994	GCA_001894145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/145/GCA_001894145.1_ASM189414v1	-	444
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.20563	50.6	-	MOKS01	117	5521	5165	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05929003	GCA_001894155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/155/GCA_001894155.1_ASM189415v1	-	513
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.20704	31.4	-	FDPE01	20	2179	2089	2/6/16	3/13/17	Scaffold	SC	SAMEA2383020	GCA_900033555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/555/GCA_900033555.1_12754_1_95	-	2842STDY5753564
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93326	51.8	-	CGRC01	111	5141	4734	4/21/15	2/28/17	Scaffold	SC	SAMEA2163496	GCA_001368575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/575/GCA_001368575.1_10608_2_59	-	2002-215815
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.73339	32.8	-	FQJV01	39	2833	2653	11/23/16	3/6/17	Contig	SC	SAMEA3448964	GCA_900126445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/445/GCA_900126445.1_17175_2_82	-	3688STDY6124954
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.8009	32.7	-	FQJX01	33	2885	2727	11/23/16	3/6/17	Contig	SC	SAMEA3448966	GCA_900126465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/465/GCA_900126465.1_17175_2_84	-	3688STDY6124956
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.93101	51.8	-	CVBK01	68	5128	4741	4/2/15	2/28/17	Scaffold	SC	SAMEA2163607	GCA_001368595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/595/GCA_001368595.1_10426_1_41	-	ty2-170
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07719	39.7	-	FEII01	24	2290	2055	2/9/16	3/13/17	Scaffold	SC	SAMEA2383116	GCA_900033565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/565/GCA_900033565.1_12754_3_1	-	2842STDY5753662
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	4.94457	50.8	-	MOKW01	309	5178	4811	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05929007	GCA_001894165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/165/GCA_001894165.1_ASM189416v1	-	728
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.55428	50.6	-	MOLC01	130	5868	5475	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05929013	GCA_001894195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/195/GCA_001894195.1_ASM189419v1	-	721
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05958	39.5	-	FELM01	31	2277	2041	2/9/16	3/13/17	Scaffold	SC	SAMEA2383198	GCA_900033575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/575/GCA_900033575.1_12754_3_83	-	2842STDY5753744
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.9329	51.8	-	CVGS01	68	5133	4743	4/2/15	2/28/17	Scaffold	SC	SAMEA2163608	GCA_001368615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/368/615/GCA_001368615.1_10562_2_78	-	MDUST399
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79754	32.7	-	FQJY01	31	2884	2733	11/23/16	3/6/17	Contig	SC	SAMEA3448967	GCA_900126475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/475/GCA_900126475.1_17175_2_85	-	3688STDY6124957
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.74605	32.7	-	FQJZ01	23	2863	2697	11/23/16	3/6/17	Contig	SC	SAMEA3448968	GCA_900126485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/485/GCA_900126485.1_17175_2_86	-	3688STDY6124958
Salmonella enterica subsp. enterica serovar Derby	28144	PRJNA296856	296856	Proteobacteria	Gammaproteobacteria	5.03689	51.8	-	LNCZ01	138	5226	4854	12/18/15	2/21/17	Scaffold	Texas Tech University	SAMN04110135	GCA_001475515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/475/515/GCA_001475515.1_ASM147551v1	-	2013LSAL02374
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11454	39.6	-	FELQ01	45	2314	2057	2/9/16	3/12/17	Scaffold	SC	SAMEA2383202	GCA_900033585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/585/GCA_900033585.1_12754_3_87	-	2842STDY5753748
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.59764	50.7	-	MOLF01	343	6008	5468	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05929016	GCA_001894225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/225/GCA_001894225.1_ASM189422v1	-	719
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.07129	50.7	-	MOIX01	152	5359	4981	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928956	GCA_001894235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/235/GCA_001894235.1_ASM189423v1	-	493
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.03298	39.7	-	FEMB01	22	2258	2014	2/9/16	3/13/17	Scaffold	SC	SAMEA2383213	GCA_900033595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/595/GCA_900033595.1_12754_4_3	-	2842STDY5753760
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA300526	300526	Proteobacteria	Gammaproteobacteria	5.24808	52.3	-	LMXO01	983	5146	4827	1/19/16	3/1/17	Scaffold	Sheba Medical Center	SAMN04217889	GCA_001518495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/518/495/GCA_001518495.1_ASM151849v1	-	120100
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.83579	32.8	-	FQKC01	19	2987	2810	11/23/16	3/6/17	Contig	SC	SAMEA3449067	GCA_900126515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/515/GCA_900126515.1_17175_3_11	-	3688STDY6125059
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.77262	32.8	-	FQMO01	27	2878	2736	11/24/16	3/6/17	Contig	SC	SAMEA3449058	GCA_900126575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/575/GCA_900126575.1_17175_3_2	-	3688STDY6125050
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97746	52.1	-	CTOA01	89	5173	4872	3/26/15	3/1/17	Scaffold	SC	SAMEA1707594	GCA_001565935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/935/GCA_001565935.1_9066_1_12	-	EWV5
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09319	39.7	-	FENW01	34	2297	2049	2/9/16	3/13/17	Scaffold	SC	SAMEA2383262	GCA_900033605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/605/GCA_900033605.1_12754_4_52	-	2842STDY5753809
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	4.9196	50.7	-	MOJB01	199	5141	4780	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928960	GCA_001894245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/245/GCA_001894245.1_ASM189424v1	-	495
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.2296	50.5	-	MOJE01	101	5446	5106	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928963	GCA_001894255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/255/GCA_001894255.1_ASM189425v1	-	498
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05979	39.5	-	FDQJ01	30	2273	2050	2/9/16	3/13/17	Scaffold	SC	SAMEA2383051	GCA_900033685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/685/GCA_900033685.1_12754_2_31	-	2842STDY5753596
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.9623	52.1	-	CTPN01	110	5141	4847	3/26/15	3/1/17	Scaffold	SC	SAMEA773629	GCA_001565955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/955/GCA_001565955.1_5299_6_5	-	H89
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79591	32.7	-	FQKU01	36	2879	2729	11/23/16	3/6/17	Contig	SC	SAMEA3449060	GCA_900126715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/715/GCA_900126715.1_17175_3_4	-	3688STDY6125052
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.80027	32.7	-	FQLD01	37	2877	2721	11/23/16	3/6/17	Contig	SC	SAMEA3449062	GCA_900126845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/845/GCA_900126845.1_17175_3_6	-	3688STDY6125054
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97713	52.1	-	CTGG01	83	5159	4877	3/26/15	3/1/17	Scaffold	SC	SAMEA1521968	GCA_001565975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/975/GCA_001565975.1_8080_3_10	-	H105
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04267	39.8	-	FFQN01	34	2259	2020	2/9/16	3/13/17	Scaffold	SC	SAMEA2203761	GCA_900033785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/785/GCA_900033785.1_11657_8_4	-	2245STDY5608900
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.16132	50.6	-	MOJI01	156	5439	5049	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928967	GCA_001894305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/305/GCA_001894305.1_ASM189430v1	-	632
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.12173	50.5	-	MOJJ01	178	5415	4977	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928968	GCA_001894315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/315/GCA_001894315.1_ASM189431v1	-	584
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99101	39.8	-	FFQQ01	40	2191	1942	2/9/16	3/13/17	Scaffold	SC	SAMEA2203765	GCA_900033795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/795/GCA_900033795.1_11658_2_96	-	2245STDY5608904
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.98146	52.1	-	CTLL01	64	5159	4865	3/26/15	3/1/17	Scaffold	SC	SAMEA1707608	GCA_001565995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/565/995/GCA_001565995.1_9065_1_9	-	EWV3
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79081	32.7	-	FQMB01	27	2874	2717	11/23/16	3/6/17	Contig	SC	SAMEA3449063	GCA_900126925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/925/GCA_900126925.1_17175_3_7	-	3688STDY6125055
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.71451	32.7	-	FQPC01	25	2805	2644	11/25/16	3/8/17	Contig	SC	SAMEA3448979	GCA_900127645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/645/GCA_900127645.1_17138_2_10	-	3688STDY6124969
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97894	52.1	-	CTHZ01	86	5164	4885	3/26/15	3/1/17	Scaffold	SC	SAMEA1521970	GCA_001566035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/035/GCA_001566035.1_8080_3_37	-	H132
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99361	39.8	-	FFRB01	22	2235	1964	2/9/16	3/6/17	Scaffold	SC	SAMEA2203778	GCA_900033805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/805/GCA_900033805.1_11679_1_6	-	2245STDY5608917
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.1917	50.6	-	MOJL01	124	5446	5069	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928970	GCA_001894325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/325/GCA_001894325.1_ASM189432v1	-	499
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.0815	50.4	-	MOJN01	152	5384	4960	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928973	GCA_001894335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/335/GCA_001894335.1_ASM189433v1	-	501
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.81897	39.6	-	FFRD01	13	2011	1813	2/9/16	3/5/17	Scaffold	SC	SAMEA2203781	GCA_900033815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/815/GCA_900033815.1_11658_2_95	-	2245STDY5608920
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.95089	52.1	-	CTOV01	96	5119	4854	3/26/15	3/1/17	Scaffold	SC	SAMEA773505	GCA_001566055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/055/GCA_001566055.1_5275_1_2	-	V13
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.75736	32.8	-	FQPE01	18	2899	2751	11/25/16	3/8/17	Contig	SC	SAMEA3448982	GCA_900127655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/655/GCA_900127655.1_17138_2_13	-	3688STDY6124972
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.82478	32.7	-	FQPI01	11	2965	2809	11/25/16	3/8/17	Contig	SC	SAMEA3448997	GCA_900127665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/665/GCA_900127665.1_17138_2_28	-	3688STDY6124987
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.9775	52.1	-	CTGA01	83	5158	4875	3/26/15	3/1/17	Scaffold	SC	SAMEA1521974	GCA_001566095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/095/GCA_001566095.1_8080_3_59	-	V79
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09832	39.5	-	FFRJ01	32	2329	2090	2/9/16	6/19/17	Scaffold	SC	SAMEA2203788	GCA_900033835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/835/GCA_900033835.1_11657_4_5	-	2245STDY5608927
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.21247	50.3	-	MOJW01	129	5439	5072	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928981	GCA_001894385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/385/GCA_001894385.1_ASM189438v1	-	659
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.61438	50.6	-	MOJX01	191	6010	5535	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928983	GCA_001894395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/395/GCA_001894395.1_ASM189439v1	-	708
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08786	39.6	-	FFRO01	38	2284	2062	2/9/16	6/9/17	Scaffold	SC	SAMEA2203795	GCA_900033845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/845/GCA_900033845.1_11893_8_13	-	2245STDY5608934
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.94668	52.1	-	CTGV01	73	5088	4855	3/26/15	3/1/17	Scaffold	SC	SAMEA773548	GCA_001566115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/115/GCA_001566115.1_5275_1_10	-	V21
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.78817	32.7	-	FQPJ01	19	2916	2767	11/25/16	3/8/17	Contig	SC	SAMEA3449003	GCA_900127695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/695/GCA_900127695.1_17138_2_34	-	3688STDY6124993
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.78807	32.7	-	FQPL01	30	2874	2720	11/25/16	3/8/17	Contig	SC	SAMEA3449004	GCA_900127715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/715/GCA_900127715.1_17138_2_35	-	3688STDY6124994
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.97343	52.1	-	CTIK01	76	5155	4878	3/26/15	3/1/17	Scaffold	SC	SAMEA1522012	GCA_001566155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/155/GCA_001566155.1_8080_3_32	-	H127
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.07529	39.6	-	FFSJ01	26	2277	2018	2/10/16	3/8/17	Scaffold	SC	SAMEA2203824	GCA_900033855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/855/GCA_900033855.1_11679_1_20	-	2245STDY5608963
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	4.75689	50.7	-	MOKF01	172	5030	4618	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928990	GCA_001894415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/415/GCA_001894415.1_ASM189441v1	-	714
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.12247	50.5	-	MOJR01	162	5411	4993	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928976	GCA_001894425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/425/GCA_001894425.1_ASM189442v1	-	647
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.29698	39.7	-	FFSM01	337	2544	2206	2/10/16	3/5/17	Scaffold	SC	SAMEA2203825	GCA_900033865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/865/GCA_900033865.1_11657_4_16	-	2245STDY5608964
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.87145	52.1	-	CTGC01	110	5013	4730	3/26/15	3/1/17	Scaffold	SC	SAMEA773625	GCA_001566175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/175/GCA_001566175.1_5275_7_2	-	H15
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.71293	32.7	-	FQPN01	17	2810	2660	11/25/16	3/8/17	Contig	SC	SAMEA3449012	GCA_900127725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/725/GCA_900127725.1_17138_2_43	-	3688STDY6125002
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79098	32.7	-	FQPO01	24	2873	2723	11/25/16	3/8/17	Contig	SC	SAMEA3449029	GCA_900127745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/745/GCA_900127745.1_17138_2_60	-	3688STDY6125021
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB3215	204838	Proteobacteria	Gammaproteobacteria	4.7329	52	-	CVCL01	56	4893	4527	4/2/15	3/1/17	Scaffold	SC	SAMEA2156840	GCA_001566195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/566/195/GCA_001566195.1_10426_1_83	-	ty2-115
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.13597	39.5	-	FFSO01	120	2345	2091	2/10/16	3/6/17	Scaffold	SC	SAMEA2203828	GCA_900033875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/875/GCA_900033875.1_11657_4_17	-	2245STDY5608967
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.77508	50.4	-	MOKI01	211	6094	5563	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928993	GCA_001894465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/465/GCA_001894465.1_ASM189446v1	-	570
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	6.13792	48.8	-	MOKM01	884	6242	5704	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928997	GCA_001894475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/475/GCA_001894475.1_ASM189447v1	-	687
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.16312	39.6	-	FFST01	118	2366	2126	2/10/16	3/13/17	Scaffold	SC	SAMEA2203832	GCA_900033885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/885/GCA_900033885.1_11511_8_18	-	2245STDY5608971
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJNA313360	313360	Proteobacteria	Gammaproteobacteria	4.82069	52	-	LUHL01	172	5008	4640	3/25/16	3/1/17	Scaffold	Institute for Medical Research	SAMN04520099	GCA_001597665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/665/GCA_001597665.1_ASM159766v1	-	IMR_TP298/15
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79283	32.7	-	FQPP01	31	2874	2724	11/25/16	3/8/17	Contig	SC	SAMEA3449036	GCA_900127755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/755/GCA_900127755.1_17138_2_67	-	3688STDY6125028
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.81112	32.7	-	FQTF01	9	2945	2786	12/2/16	3/8/17	Contig	SC	SAMEA3448837	GCA_900127805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/805/GCA_900127805.1_17175_1_32	-	3688STDY6124816
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.82088	52.3	-	LWII01	49	4870	4598	4/14/16	3/1/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN02344790	GCA_001620405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/405/GCA_001620405.1_ASM162040v1	-	FCC0087
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.11972	39.6	-	FFTD01	122	2347	2091	2/10/16	3/13/17	Scaffold	SC	SAMEA2203844	GCA_900033895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/895/GCA_900033895.1_11657_4_21	-	2245STDY5608983
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.18969	50.6	-	MOKN01	106	5483	5123	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928998	GCA_001894495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/495/GCA_001894495.1_ASM189449v1	-	443
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.3914	50.2	-	MOKO01	139	5732	5317	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05928999	GCA_001894505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/505/GCA_001894505.1_ASM189450v1	-	641
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.02228	39.8	-	FFTN01	105	2224	1961	2/10/16	3/12/17	Scaffold	SC	SAMEA2203856	GCA_900033905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/905/GCA_900033905.1_11658_2_86	-	2245STDY5608996
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.80116	52.1	-	LWIL01	105	4904	4589	4/14/16	3/1/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN01907437	GCA_001620415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/415/GCA_001620415.1_ASM162041v1	-	MOD1_SALC_72
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.86228	32.8	-	FQPU01	37	2992	2845	11/25/16	3/8/17	Contig	SC	SAMEA3448843	GCA_900127815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/815/GCA_900127815.1_17175_1_38	-	3688STDY6124822
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.82396	32.7	-	FQPW01	18	2988	2838	11/25/16	3/8/17	Contig	SC	SAMEA3448849	GCA_900127845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/845/GCA_900127845.1_17175_1_44	-	3688STDY6124828
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.83122	52.1	-	LWIK01	57	4911	4652	4/14/16	3/1/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN01907440	GCA_001620425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/425/GCA_001620425.1_ASM162042v1	-	MOD1_SALC_77
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.97302	39.8	-	FFTO01	28	2183	1957	2/10/16	3/13/17	Scaffold	SC	SAMEA2203857	GCA_900033915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/915/GCA_900033915.1_11511_8_23	-	2245STDY5608997
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	4.97756	50.7	-	MOKP01	367	5268	4758	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05929000	GCA_001894545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/545/GCA_001894545.1_ASM189454v1	-	566
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.13114	50.4	-	MOKU01	85	5338	5007	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05929005	GCA_001894555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/555/GCA_001894555.1_ASM189455v1	-	656
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09546	39.6	-	FFTY01	25	2325	2085	2/10/16	3/8/17	Scaffold	SC	SAMEA2203869	GCA_900033925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/925/GCA_900033925.1_11658_8_3	-	2245STDY5609009
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.81813	52.1	-	LWIJ01	62	4894	4632	4/14/16	3/1/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN02344882	GCA_001620435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/435/GCA_001620435.1_ASM162043v1	-	FCC0047
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.7907	32.7	-	FQPV01	32	2868	2712	11/25/16	3/8/17	Contig	SC	SAMEA3448863	GCA_900127855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/855/GCA_900127855.1_17175_1_58	-	3688STDY6124842
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.83155	32.8	-	FQPZ01	21	3000	2849	11/25/16	3/8/17	Contig	SC	SAMEA3448872	GCA_900127875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/875/GCA_900127875.1_17175_1_67	-	3688STDY6124851
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.8208	52.1	-	LWIM01	64	4906	4642	4/14/16	3/1/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN01907434	GCA_001620485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/485/GCA_001620485.1_ASM162048v1	-	MOD1_SALC_69
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.15423	39.5	-	FFUH01	60	2359	2086	2/10/16	3/12/17	Scaffold	SC	SAMEA2203879	GCA_900033935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/935/GCA_900033935.1_11511_8_30	-	2245STDY5609019
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.31504	50.7	-	MOKV01	334	5702	5155	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05929006	GCA_001894565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/565/GCA_001894565.1_ASM189456v1	-	727
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.46155	50.5	-	MOKX01	189	5780	5358	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05929008	GCA_001894585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/585/GCA_001894585.1_ASM189458v1	-	724
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.05102	39.6	-	FFUI01	43	2239	2008	2/10/16	3/13/17	Scaffold	SC	SAMEA2203881	GCA_900033945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/945/GCA_900033945.1_11657_8_17	-	2245STDY5609021
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.84812	52.1	-	LWIN01	134	4908	4649	4/14/16	3/1/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN01907433	GCA_001620495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/495/GCA_001620495.1_ASM162049v1	-	MOD1_SALC_68
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.81032	32.7	-	FQQA01	31	2893	2735	11/25/16	3/8/17	Contig	SC	SAMEA3448877	GCA_900127885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/885/GCA_900127885.1_17175_1_72	-	3688STDY6124856
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.73597	32.7	-	FQQB01	12	2849	2694	11/25/16	3/8/17	Contig	SC	SAMEA3448874	GCA_900127895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/895/GCA_900127895.1_17175_1_69	-	3688STDY6124853
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.818	52.1	-	LWIO01	57	4912	4638	4/14/16	3/1/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN01907431	GCA_001620505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/505/GCA_001620505.1_ASM162050v1	-	MOD1_SALC_63
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.07506	39.7	-	FFUL01	37	2288	2058	2/10/16	3/13/17	Scaffold	SC	SAMEA2203884	GCA_900033955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/955/GCA_900033955.1_11658_2_84	-	2245STDY5609024
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.40439	50.5	-	MOKY01	210	5813	5350	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05929009	GCA_001894625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/625/GCA_001894625.1_ASM189462v1	-	725
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.02892	50.5	-	MOLA01	85	5276	4898	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05929011	GCA_001894635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/635/GCA_001894635.1_ASM189463v1	-	717
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04843	39.8	-	FFUM01	35	2265	2025	2/10/16	3/13/17	Scaffold	SC	SAMEA2203885	GCA_900033965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/965/GCA_900033965.1_11511_8_33	-	2245STDY5609025
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.82127	52.1	-	LWIP01	63	4912	4647	4/14/16	3/1/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN01907430	GCA_001620515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/515/GCA_001620515.1_ASM162051v1	-	MOD1_SALC_62
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79913	32.7	-	FQQD01	29	2879	2727	11/25/16	3/8/17	Contig	SC	SAMEA3449402	GCA_900127905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/905/GCA_900127905.1_17175_1_83	-	3688STDY6124867
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.80203	32.7	-	FQQC01	30	2886	2732	11/25/16	3/8/17	Contig	SC	SAMEA3448892	GCA_900127925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/925/GCA_900127925.1_17175_2_10	-	3688STDY6124881
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.823	52.1	-	LWIQ01	58	4915	4646	4/14/16	3/1/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN01907429	GCA_001620565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/565/GCA_001620565.1_ASM162056v1	-	MOD1_SALC_61
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.98225	39.7	-	FHFM01	23	2195	1958	2/10/16	3/15/17	Scaffold	SC	SAMEA2203888	GCA_900033975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/975/GCA_900033975.1_11511_8_36	-	2245STDY5609028
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.07684	50.7	-	MOLB01	102	5349	4963	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05929012	GCA_001894645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/645/GCA_001894645.1_ASM189464v1	-	718
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.52821	50.7	-	MOLD01	265	5918	5397	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05929014	GCA_001894685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/685/GCA_001894685.1_ASM189468v1	-	722
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06217	39.6	-	FHFO01	29	2245	2030	2/10/16	3/13/17	Scaffold	SC	SAMEA2203890	GCA_900033985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/985/GCA_900033985.1_11679_1_33	-	2245STDY5609030
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.82297	52.1	-	LWIS01	72	4918	4635	4/14/16	3/1/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN01907417	GCA_001620585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/585/GCA_001620585.1_ASM162058v1	-	MOD1_SALC_30
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.78104	32.7	-	FQQI01	21	2934	2757	11/25/16	3/8/17	Contig	SC	SAMEA3448902	GCA_900127965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/965/GCA_900127965.1_17175_2_20	-	3688STDY6124891
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.70062	32.7	-	FQQJ01	19	2796	2645	11/25/16	3/8/17	Contig	SC	SAMEA3448903	GCA_900127975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/975/GCA_900127975.1_17175_2_21	-	3688STDY6124892
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.82697	52.1	-	LWIR01	63	4919	4646	4/14/16	3/1/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN01907427	GCA_001620595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/595/GCA_001620595.1_ASM162059v1	-	MOD1_SALC_59
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.17529	39.4	-	FDTM01	33	2414	2169	2/9/16	3/5/17	Scaffold	SC	SAMEA2239224	GCA_900033995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/995/GCA_900033995.1_11860_8_92	-	2842STDY5644607
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.48386	50.4	-	MOLH01	118	5743	5337	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05929018	GCA_001894705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/705/GCA_001894705.1_ASM189470v1	-	685
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	5.41646	50.5	-	MOLE01	152	5721	5335	12/8/16	2/26/17	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05929015	GCA_001894715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/894/715/GCA_001894715.1_ASM189471v1	-	723
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05939	39.5	-	FDVS01	31	2285	2045	2/9/16	3/13/17	Scaffold	SC	SAMEA2238290	GCA_900034005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/005/GCA_900034005.1_11860_4_15	-	2842STDY5643659
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.82989	52.1	-	LWIT01	63	4909	4639	4/14/16	3/1/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN01907416	GCA_001620605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/605/GCA_001620605.1_ASM162060v1	-	MOD1_SALC_29
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.78927	32.7	-	FQQL01	21	2934	2776	11/25/16	3/8/17	Contig	SC	SAMEA3448905	GCA_900127995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/995/GCA_900127995.1_17175_2_23	-	3688STDY6124894
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.75168	32.3	-	FQQO01	21	2724	2533	11/25/16	3/8/17	Contig	SC	SAMEA3448927	GCA_900128025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/025/GCA_900128025.1_17175_2_45	-	3688STDY6124917
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.82941	52.1	-	LWIU01	97	4907	4636	4/14/16	3/1/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN01907414	GCA_001620645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/645/GCA_001620645.1_ASM162064v1	-	MOD1_SALC_27
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04801	39.6	-	FDYX01	41	2217	1980	2/9/16	3/6/17	Scaffold	SC	SAMEA2238431	GCA_900034015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/015/GCA_900034015.1_11860_5_62	-	2842STDY5643801
Escherichia coli	562	PRJNA321562	321562	Proteobacteria	Gammaproteobacteria	5.2684	50.7	-	LZOE01	133	5555	5167	12/19/16	2/26/17	Scaffold	CSIR-Institute of Microbial Technology	SAMN04992841	GCA_001909105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/909/105/GCA_001909105.1_ASM190910v1	-	ECG023
Escherichia coli O25b:H4-ST131	941322	PRJNA275809	275809	Proteobacteria	Gammaproteobacteria	5.26776	50.6	-	LAWT01	90	5567	5183	1/9/17	2/26/17	Scaffold	University of Copenhagen	SAMN03354200	GCA_001940375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/940/375/GCA_001940375.1_ASM194037v1	-	UR40
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09233	39.7	-	FDZC01	28	2323	2082	2/9/16	3/13/17	Scaffold	SC	SAMEA2238436	GCA_900034025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/025/GCA_900034025.1_11860_5_67	-	2842STDY5643806
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.81687	52.1	-	LWIV01	60	4900	4645	4/14/16	3/1/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN01907413	GCA_001620665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/665/GCA_001620665.1_ASM162066v1	-	MOD1_SALC_26
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.71586	32.7	-	FQQR01	14	2832	2683	11/25/16	3/8/17	Contig	SC	SAMEA3448938	GCA_900128055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/055/GCA_900128055.1_17175_2_56	-	3688STDY6124928
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.8147	32.7	-	FQQS01	26	2965	2811	11/25/16	3/8/17	Contig	SC	SAMEA3448950	GCA_900128065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/065/GCA_900128065.1_17175_2_68	-	3688STDY6124940
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.83521	52.1	-	LWIX01	104	4897	4644	4/14/16	3/1/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN01907411	GCA_001620685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/685/GCA_001620685.1_ASM162068v1	-	MOD1_SALC_24
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05974	39.5	-	FCUJ01	44	2279	2041	2/6/16	3/13/17	Scaffold	SC	SAMEA2238835	GCA_900034035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/035/GCA_900034035.1_11893_1_76	-	2842STDY5644209
Escherichia coli	562	PRJNA354507	354507	Proteobacteria	Gammaproteobacteria	5.08076	50.9	-	MPUF01	331	5271	4936	2/9/17	2/26/17	Scaffold	Robert Koch Institute	SAMN06047112	GCA_001990845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/845/GCA_001990845.1_ASM199084v1	-	LM17584/1
Escherichia coli	562	PRJNA354507	354507	Proteobacteria	Gammaproteobacteria	5.19519	50.6	-	MPUA01	407	5472	5001	2/9/17	2/26/17	Scaffold	Robert Koch Institute	SAMN06047031	GCA_001990855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/855/GCA_001990855.1_ASM199085v1	-	TS25/08
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.14331	39.6	-	FCUN01	54	2354	2090	2/6/16	3/13/17	Scaffold	SC	SAMEA2238843	GCA_900034045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/045/GCA_900034045.1_11893_1_84	-	2842STDY5644217
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.83986	52.1	-	LWIW01	117	4913	4646	4/14/16	3/1/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN01907412	GCA_001620705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/705/GCA_001620705.1_ASM162070v1	-	MOD1_SALC_25
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.77062	32.7	-	FQQU01	14	2890	2736	11/25/16	3/8/17	Contig	SC	SAMEA3448960	GCA_900128095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/095/GCA_900128095.1_17175_2_78	-	3688STDY6124950
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.80071	32.7	-	FQQX01	20	2956	2793	11/25/16	3/8/17	Contig	SC	SAMEA3448969	GCA_900128115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/115/GCA_900128115.1_17175_2_87	-	3688STDY6124959
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.78577	52.1	-	LWIY01	47	4845	4585	4/14/16	3/1/17	Scaffold	New York State Dept. of Health - Wadsworth Center	SAMN01902284	GCA_001620725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/725/GCA_001620725.1_ASM162072v1	-	NY_BAC0700002318-01
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15393	39.6	-	FCUL01	51	2398	2153	2/6/16	3/13/17	Scaffold	SC	SAMEA2238841	GCA_900034055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/055/GCA_900034055.1_11893_1_82	-	2842STDY5644215
Escherichia coli	562	PRJNA354507	354507	Proteobacteria	Gammaproteobacteria	4.99902	50.7	-	MPUD01	178	5211	4868	2/9/17	2/26/17	Scaffold	Robert Koch Institute	SAMN06047079	GCA_001990865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/865/GCA_001990865.1_ASM199086v1	-	K30
Escherichia coli	562	PRJNA354507	354507	Proteobacteria	Gammaproteobacteria	5.15311	50.5	-	MPTZ01	228	5389	5033	2/9/17	2/26/17	Scaffold	Robert Koch Institute	SAMN06047030	GCA_001990875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/875/GCA_001990875.1_ASM199087v1	-	RF1a
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1375	39.5	-	FDAC01	38	2340	2110	2/6/16	3/5/17	Scaffold	SC	SAMEA2382612	GCA_900034065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/065/GCA_900034065.1_12673_6_67	-	2842STDY5753152
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.79039	52.1	-	LWIZ01	35	4849	4596	4/14/16	3/1/17	Scaffold	New York State Dept. of Health - Wadsworth Center	SAMN01902283	GCA_001620735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/620/735/GCA_001620735.1_ASM162073v1	-	NY_BAC0700001643R1
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79297	32.7	-	FQQY01	28	2876	2728	11/25/16	3/8/17	Contig	SC	SAMEA3449066	GCA_900128125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/125/GCA_900128125.1_17175_3_10	-	3688STDY6125058
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79616	32.7	-	FQQZ01	33	2876	2722	11/25/16	3/8/17	Contig	SC	SAMEA3449069	GCA_900128135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/135/GCA_900128135.1_17175_3_13	-	3688STDY6125061
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.82747	52.1	-	LWRN01	57	4905	4642	4/23/16	3/1/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN01907415	GCA_001630145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/630/145/GCA_001630145.1_ASM163014v1	-	MOD1_SALC_28
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00115	39.7	-	FCZZ01	40	2208	1995	2/6/16	3/13/17	Scaffold	SC	SAMEA2382609	GCA_900034075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/075/GCA_900034075.1_12673_6_64	-	2842STDY5753149
Escherichia coli	562	PRJNA354507	354507	Proteobacteria	Gammaproteobacteria	5.43984	50.6	-	MPUB01	401	5865	5407	2/9/17	2/26/17	Scaffold	Robert Koch Institute	SAMN06047035	GCA_001990925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/925/GCA_001990925.1_ASM199092v1	-	LM27564
Escherichia coli	562	PRJNA354507	354507	Proteobacteria	Gammaproteobacteria	5.09375	50.7	-	MPTX01	219	5350	4997	2/9/17	2/26/17	Scaffold	Robert Koch Institute	SAMN06046975	GCA_001990935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/935/GCA_001990935.1_ASM199093v1	-	TS18/08
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10374	39.6	-	FDBS01	41	2351	2097	2/6/16	3/13/17	Scaffold	SC	SAMEA2382655	GCA_900034085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/085/GCA_900034085.1_12673_7_15	-	2842STDY5753196
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.86105	52.1	-	LWRM01	133	4970	4672	4/23/16	3/1/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN01907428	GCA_001630155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/630/155/GCA_001630155.1_ASM163015v1	-	MOD1_SALC_60
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.83968	32.7	-	FQRO01	32	2991	2834	11/25/16	3/8/17	Contig	SC	SAMEA3449104	GCA_900128285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/285/GCA_900128285.1_17175_3_48	-	3688STDY6125102
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.72586	32.7	-	FQRQ01	16	2825	2673	11/25/16	3/8/17	Contig	SC	SAMEA3449061	GCA_900128305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/305/GCA_900128305.1_17175_3_5	-	3688STDY6125053
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.81585	52.1	-	LWRL01	45	4906	4641	4/23/16	3/1/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN01907432	GCA_001630165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/630/165/GCA_001630165.1_ASM163016v1	-	MOD1_SALC_64
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08831	39.6	-	FDCZ01	30	2283	2059	2/6/16	3/13/17	Scaffold	SC	SAMEA2382688	GCA_900034095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/095/GCA_900034095.1_12673_7_48	-	2842STDY5753229
Escherichia coli	562	PRJNA354507	354507	Proteobacteria	Gammaproteobacteria	5.24848	50.8	-	MPUE01	291	5476	5104	2/9/17	2/26/17	Scaffold	Robert Koch Institute	SAMN06047103	GCA_001990965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/990/965/GCA_001990965.1_ASM199096v1	-	TS21/08
Escherichia coli	562	PRJNA354507	354507	Proteobacteria	Gammaproteobacteria	5.67289	50.6	-	MPTY01	403	6102	5637	2/9/17	2/26/17	Scaffold	Robert Koch Institute	SAMN06046988	GCA_001994955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/955/GCA_001994955.1_ASM199495v1	-	LM27558stx2
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98107	39.7	-	FDGQ01	20	2187	1962	2/6/16	3/8/17	Scaffold	SC	SAMEA2382784	GCA_900034105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/105/GCA_900034105.1_12718_4_49	-	2842STDY5753326
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.82466	52.1	-	LWRJ01	71	4913	4640	4/23/16	3/1/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN01907438	GCA_001630215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/630/215/GCA_001630215.1_ASM163021v1	-	MOD1_SALC_73
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.72174	32.3	-	FQTD01	8	2694	2524	12/2/16	3/8/17	Contig	SC	SAMEA2662072	GCA_900128655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/655/GCA_900128655.1_14324_3_19	-	2588STDY5890701
Staphylococcus aureus	1280	PRJEB12840	350474	Terrabacteria group	Firmicutes	2.83941	32.7	-	FSRX01	75	2942	2806	12/15/16	8/21/17	Contig	HOSPICES CIVILS DE LYON	SAMEA3883073	GCA_900149265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/265/GCA_900149265.1_HT20030749	-	-
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.82361	52.1	-	LWRI01	47	4913	4645	4/23/16	3/1/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN01907439	GCA_001630225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/630/225/GCA_001630225.1_ASM163022v1	-	MOD1_SALC_74
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1351	39.6	-	FDKH01	63	2389	2118	2/6/16	3/13/17	Scaffold	SC	SAMEA2382886	GCA_900034115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/115/GCA_900034115.1_12718_5_56	-	2842STDY5753429
Escherichia coli	562	PRJNA354507	354507	Proteobacteria	Gammaproteobacteria	5.41109	50.6	-	MPUC01	264	5692	5299	2/9/17	2/26/17	Scaffold	Robert Koch Institute	SAMN06047041	GCA_001994975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/994/975/GCA_001994975.1_ASM199497v1	-	LM14603/08
Escherichia coli	562	PRJNA341407	341407	Proteobacteria	Gammaproteobacteria	5.33333	50.3	-	MTFS01	374	5764	5323	2/13/17	2/22/17	Scaffold	California Department of Public Health	SAMN05721768	GCA_001997045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/045/GCA_001997045.1_ASM199704v1	-	EDL 933
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15476	39.6	-	FDMO01	54	2421	2160	2/6/16	3/13/17	Scaffold	SC	SAMEA2382948	GCA_900034125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/125/GCA_900034125.1_12754_1_23	-	2842STDY5753492
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.82925	52.1	-	LWRH01	69	4924	4647	4/23/16	3/1/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN01907443	GCA_001630235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/630/235/GCA_001630235.1_ASM163023v1	-	MOD1_SALC_80
Staphylococcus aureus	1280	PRJEB12840	350474	Terrabacteria group	Firmicutes	2.8018	32.7	-	FSRW01	37	2880	2759	12/15/16	8/21/17	Contig	HOSPICES CIVILS DE LYON	SAMEA3883071	GCA_900149275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/275/GCA_900149275.1_ST20120331	-	-
Staphylococcus aureus	1280	PRJEB12950	361351	Terrabacteria group	Firmicutes	2.75848	32.7	-	FUHA01	55	2864	2682	2/8/17	3/6/17	Contig	Lausanne University Hospital	SAMEA48331918	GCA_900155705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/705/GCA_900155705.1_CHUV_1	-	-
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.8256	52.1	-	LWRG01	72	4915	4638	4/23/16	3/1/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN01907444	GCA_001630255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/630/255/GCA_001630255.1_ASM163025v1	-	MOD1_SALC_81
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07239	39.6	-	FDMZ01	39	2248	2017	2/6/16	3/6/17	Scaffold	SC	SAMEA2382959	GCA_900034135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/135/GCA_900034135.1_12754_1_34	-	2842STDY5753503
Escherichia coli	562	PRJNA341407	341407	Proteobacteria	Gammaproteobacteria	4.67228	50.8	-	MTFT01	99	4774	4487	2/13/17	2/22/17	Scaffold	California Department of Public Health	SAMN05721769	GCA_001997065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/065/GCA_001997065.1_ASM199706v1	-	ATCC 8739
Escherichia coli	562	PRJNA341407	341407	Proteobacteria	Gammaproteobacteria	5.14676	50.4	-	MTFU01	83	5359	5028	2/13/17	2/23/17	Scaffold	California Department of Public Health	SAMN05721770	GCA_001997075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/075/GCA_001997075.1_ASM199707v1	-	ATCC 25922
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05592	39.6	-	FDNA01	32	2245	1996	2/6/16	3/13/17	Scaffold	SC	SAMEA2382960	GCA_900034145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/145/GCA_900034145.1_12754_1_35	-	2842STDY5753504
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.76768	52.2	-	LWRF01	46	4816	4561	4/23/16	3/1/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN02344793	GCA_001630295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/630/295/GCA_001630295.1_ASM163029v1	-	FSF0063
Staphylococcus aureus	1280	PRJEB12950	361351	Terrabacteria group	Firmicutes	2.72578	32.7	-	FUGZ01	38	2792	2623	2/8/17	3/6/17	Contig	Lausanne University Hospital	SAMEA48337168	GCA_900155715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/715/GCA_900155715.1_CHUV_8	-	-
Staphylococcus aureus	1280	PRJEB12950	361351	Terrabacteria group	Firmicutes	2.71407	32.7	-	FUGX01	39	2787	2612	2/8/17	3/6/17	Contig	Lausanne University Hospital	SAMEA48334918	GCA_900155725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/725/GCA_900155725.1_CHUV_5	-	-
Salmonella enterica	28901	PRJNA320867	320867	Proteobacteria	Gammaproteobacteria	5.05028	52	-	LXOM01	225	5197	4855	5/10/16	3/1/17	Scaffold	University of Colorado - Boulder	SAMN04958316	GCA_001641105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/105/GCA_001641105.1_ASM164110v1	-	CU013109
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99167	39.8	-	FEJG01	55	2189	1933	2/9/16	3/13/17	Scaffold	SC	SAMEA2383140	GCA_900034155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/155/GCA_900034155.1_12754_3_25	-	2842STDY5753686
Escherichia coli	562	PRJNA341407	341407	Proteobacteria	Gammaproteobacteria	5.1925	50.5	-	MTGM01	254	5563	5121	2/13/17	2/22/17	Scaffold	California Department of Public Health	SAMN05721788	GCA_001997405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/405/GCA_001997405.1_ASM199740v1	-	CDPH_C72
Escherichia coli	562	PRJNA352659	352659	Proteobacteria	Gammaproteobacteria	4.93675	50.5	-	NACM01	13	5195	4850	4/6/17	4/8/17	Scaffold	DTU	SAMN06562601	GCA_002080495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/495/GCA_002080495.1_ASM208049v1	-	25
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13807	39.7	-	FEKA01	29	2348	2120	2/9/16	3/13/17	Scaffold	SC	SAMEA2383160	GCA_900034165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/165/GCA_900034165.1_12754_3_45	-	2842STDY5753706
Salmonella enterica	28901	PRJNA254816	254816	Proteobacteria	Gammaproteobacteria	4.87503	52.2	-	JQWD01	190	5014	4770	5/16/16	3/1/17	Scaffold	"Agricultural Research Service, United States Department of Agriculture"	SAMN02908606	GCA_001643795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/795/GCA_001643795.1_CRJJGF_00099_v1.0	-	CRJJGF_00099
Staphylococcus aureus	1280	PRJEB12950	361351	Terrabacteria group	Firmicutes	2.74659	32.7	-	FUGY01	30	2877	2706	2/8/17	3/6/17	Contig	Lausanne University Hospital	SAMEA48337918	GCA_900155745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/745/GCA_900155745.1_CHUV_9	-	-
Staphylococcus aureus	1280	PRJEB12950	361351	Terrabacteria group	Firmicutes	2.78568	32.7	-	FUHF01	38	2869	2714	2/8/17	3/6/17	Contig	Lausanne University Hospital	SAMEA48340918	GCA_900155755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/755/GCA_900155755.1_CHUV_13	-	-
Salmonella enterica	28901	PRJNA254816	254816	Proteobacteria	Gammaproteobacteria	4.70142	52.2	-	JQVX01	178	4804	4574	5/16/16	3/1/17	Scaffold	"Agricultural Research Service, United States Department of Agriculture"	SAMN02908600	GCA_001643805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/805/GCA_001643805.1_CRJJGF_00093_v1.0	-	CRJJGF_00093
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05747	39.7	-	FELI01	25	2264	2038	2/9/16	3/13/17	Scaffold	SC	SAMEA2383194	GCA_900034175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/175/GCA_900034175.1_12754_3_79	-	2842STDY5753740
Escherichia coli	562	PRJNA352659	352659	Proteobacteria	Gammaproteobacteria	5.45091	50.5	-	NACR01	239	5643	5202	4/6/17	4/8/17	Scaffold	DTU	SAMN06562596	GCA_002080505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/505/GCA_002080505.1_ASM208050v1	-	4
Escherichia coli	562	PRJNA352659	352659	Proteobacteria	Gammaproteobacteria	5.31178	50.6	-	NACT01	404	5449	5079	4/6/17	4/8/17	Scaffold	DTU	SAMN06562594	GCA_002080535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/535/GCA_002080535.1_ASM208053v1	-	15
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10619	39.7	-	FELP01	50	2331	2077	2/9/16	3/13/17	Scaffold	SC	SAMEA2383201	GCA_900034185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/185/GCA_900034185.1_12754_3_86	-	2842STDY5753747
Salmonella enterica subsp. enterica serovar Widemarsh	1906180	PRJNA254816	254816	Proteobacteria	Gammaproteobacteria	4.73846	52.1	-	JQUO01	164	4774	4543	5/16/16	3/1/17	Scaffold	"Agricultural Research Service, United States Department of Agriculture"	SAMN02908565	GCA_001643815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/815/GCA_001643815.1_CRJJGF_00058_v1.0	27417830	CRJJGF_00058
Staphylococcus aureus	1280	PRJEB12950	361351	Terrabacteria group	Firmicutes	2.80326	32.7	-	FUHH01	41	2943	2806	2/8/17	3/6/17	Contig	Lausanne University Hospital	SAMEA48341668	GCA_900155765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/765/GCA_900155765.1_CHUV_14	-	-
Staphylococcus aureus	1280	PRJEB12950	361351	Terrabacteria group	Firmicutes	2.72196	32.7	-	FUGW01	26	2764	2623	2/8/17	3/6/17	Contig	Lausanne University Hospital	SAMEA48332668	GCA_900155775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/775/GCA_900155775.1_CHUV_2	-	-
Salmonella enterica	28901	PRJNA254816	254816	Proteobacteria	Gammaproteobacteria	4.58063	52.1	-	JQUR01	168	4631	4407	5/16/16	3/1/17	Scaffold	"Agricultural Research Service, United States Department of Agriculture"	SAMN02908568	GCA_001643825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/825/GCA_001643825.1_CRJJGF_00061_v1.0	-	CRJJGF_00061
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1282	39.6	-	FDYS01	43	2368	2128	2/9/16	3/13/17	Scaffold	SC	SAMEA2238421	GCA_900034345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/345/GCA_900034345.1_11860_5_52	-	2842STDY5643791
Escherichia coli	562	PRJNA352659	352659	Proteobacteria	Gammaproteobacteria	4.83689	50.6	-	NACP01	229	5009	4734	4/6/17	4/8/17	Scaffold	DTU	SAMN06562598	GCA_002080555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/555/GCA_002080555.1_ASM208055v1	-	2
Escherichia coli	562	PRJNA352659	352659	Proteobacteria	Gammaproteobacteria	4.87786	50.6	-	NACQ01	313	5127	4801	4/6/17	4/8/17	Scaffold	DTU	SAMN06562597	GCA_002080565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/565/GCA_002080565.1_ASM208056v1	-	13
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01656	39.7	-	FCUM01	31	2215	1973	2/6/16	3/13/17	Scaffold	SC	SAMEA2238840	GCA_900034355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/355/GCA_900034355.1_11893_1_81	-	2842STDY5644214
Salmonella enterica	28901	PRJNA254816	254816	Proteobacteria	Gammaproteobacteria	4.7825	51.4	-	JQYQ01	108	4722	4356	5/16/16	3/1/17	Scaffold	"Agricultural Research Service, United States Department of Agriculture"	SAMN02908671	GCA_001643875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/875/GCA_001643875.1_CRJJGF_00165_v1.0	-	CRJJGF_00165
Staphylococcus aureus	1280	PRJEB12950	361351	Terrabacteria group	Firmicutes	2.7645	32.7	-	FUHI01	27	2824	2681	2/8/17	3/6/17	Contig	Lausanne University Hospital	SAMEA48334168	GCA_900155785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/785/GCA_900155785.1_CHUV_4	-	-
Staphylococcus aureus	1280	PRJEB12950	361351	Terrabacteria group	Firmicutes	2.74248	32.7	-	FUHJ01	32	2869	2711	2/8/17	3/6/17	Contig	Lausanne University Hospital	SAMEA48338668	GCA_900155795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/795/GCA_900155795.1_CHUV_10	-	-
Salmonella enterica	28901	PRJNA254816	254816	Proteobacteria	Gammaproteobacteria	4.72208	52.1	-	JQXY01	154	4761	4551	5/16/16	3/1/17	Scaffold	"Agricultural Research Service, United States Department of Agriculture"	SAMN02908653	GCA_001643895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/895/GCA_001643895.1_CRJJGF_00147_v1.0	-	CRJJGF_00147
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13759	39.7	-	FCUS01	29	2349	2121	2/6/16	3/13/17	Scaffold	SC	SAMEA2238851	GCA_900034365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/365/GCA_900034365.1_12216_4_91	-	2842STDY5644226
Escherichia coli	562	PRJNA352659	352659	Proteobacteria	Gammaproteobacteria	4.87424	50.6	-	NACU01	256	5096	4815	4/6/17	4/8/17	Scaffold	DTU	SAMN06562593	GCA_002080605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/605/GCA_002080605.1_ASM208060v1	-	9
Escherichia coli	562	PRJNA352659	352659	Proteobacteria	Gammaproteobacteria	5.30025	50.6	-	NACV01	417	5434	5060	4/6/17	4/8/17	Scaffold	DTU	SAMN06562592	GCA_002080635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/635/GCA_002080635.1_ASM208063v1	-	12
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06576	39.5	-	FCYK01	27	2254	2021	2/6/16	3/13/17	Scaffold	SC	SAMEA2238979	GCA_900034375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/375/GCA_900034375.1_11861_4_32	-	2842STDY5644355
Salmonella enterica	28901	PRJNA254816	254816	Proteobacteria	Gammaproteobacteria	4.98228	52	-	JQWF01	196	5150	4885	5/16/16	3/1/17	Scaffold	"Agricultural Research Service, United States Department of Agriculture"	SAMN02908608	GCA_001643905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/905/GCA_001643905.1_CRJJGF_00101_v1.0	-	CRJJGF_00101
Staphylococcus aureus	1280	PRJEB12950	361351	Terrabacteria group	Firmicutes	2.72727	32.7	-	FUHG01	44	2796	2627	2/8/17	3/6/17	Contig	Lausanne University Hospital	SAMEA48335668	GCA_900155805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/805/GCA_900155805.1_CHUV_6	-	-
Staphylococcus aureus	1280	PRJEB12950	361351	Terrabacteria group	Firmicutes	2.72344	32.7	-	FUHD01	26	2789	2615	2/8/17	3/6/17	Contig	Lausanne University Hospital	SAMEA48336418	GCA_900155815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/815/GCA_900155815.1_CHUV_7	-	-
Salmonella enterica	28901	PRJNA254816	254816	Proteobacteria	Gammaproteobacteria	4.90451	51.8	-	JQYK01	176	4939	4688	5/16/16	3/1/17	Scaffold	"Agricultural Research Service, United States Department of Agriculture"	SAMN02908665	GCA_001643915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/643/915/GCA_001643915.1_CRJJGF_00159_v1.0	-	CRJJGF_00159
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09222	39.6	-	FDBE01	30	2285	2045	2/6/16	3/13/17	Scaffold	SC	SAMEA2382641	GCA_900034385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/385/GCA_900034385.1_12673_7_1	-	2842STDY5753182
Escherichia coli	562	PRJNA352659	352659	Proteobacteria	Gammaproteobacteria	4.8832	50.6	-	NACW01	229	5089	4817	4/6/17	4/8/17	Scaffold	DTU	SAMN06562591	GCA_002080645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/645/GCA_002080645.1_ASM208064v1	-	17
Escherichia coli	562	PRJNA352659	352659	Proteobacteria	Gammaproteobacteria	4.83284	50.6	-	NACO01	214	5024	4726	4/6/17	4/8/17	Scaffold	DTU	SAMN06562599	GCA_002080675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/675/GCA_002080675.1_ASM208067v1	-	10
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08423	39.6	-	FDFG01	55	2306	2064	2/6/16	3/15/17	Scaffold	SC	SAMEA2382748	GCA_900034395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/395/GCA_900034395.1_12718_4_13	-	2842STDY5753290
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA328088	328088	Proteobacteria	Gammaproteobacteria	4.75057	52.1	-	MAXZ01	45	4873	4608	7/21/16	3/1/17	Scaffold	Sheba Medical Center	SAMN05363656	GCA_001691655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/655/GCA_001691655.1_ASM169165v1	-	150118463
Staphylococcus aureus	1280	PRJEB12950	361351	Terrabacteria group	Firmicutes	2.84757	32.7	-	FUHE01	39	3003	2844	2/8/17	3/9/17	Contig	Lausanne University Hospital	SAMEA48340168	GCA_900155825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/825/GCA_900155825.1_CHUV_12	-	-
Staphylococcus aureus	1280	PRJEB12950	361351	Terrabacteria group	Firmicutes	2.78699	32.7	-	FUHC01	32	2902	2750	2/8/17	3/6/17	Contig	Lausanne University Hospital	SAMEA48342418	GCA_900155835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/835/GCA_900155835.1_CHUV_15	-	-
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA328080	328080	Proteobacteria	Gammaproteobacteria	4.76189	52.1	-	MAXY01	33	4879	4618	7/21/16	3/1/17	Scaffold	Sheba Medical Center	SAMN05363640	GCA_001691665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/665/GCA_001691665.1_ASM169166v1	-	37007
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.20059	39.5	-	FDGF01	50	2434	2199	2/6/16	3/13/17	Scaffold	SC	SAMEA2382772	GCA_900034405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/405/GCA_900034405.1_12718_4_37	-	2842STDY5753314
Escherichia coli	562	PRJNA352659	352659	Proteobacteria	Gammaproteobacteria	4.91875	50.5	-	NACN01	111	5185	4864	4/6/17	4/8/17	Scaffold	DTU	SAMN06562600	GCA_002080685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/685/GCA_002080685.1_ASM208068v1	-	26
Escherichia coli	562	PRJNA352659	352659	Proteobacteria	Gammaproteobacteria	4.89224	50.5	-	NACS01	238	5126	4819	4/6/17	4/8/17	Scaffold	DTU	SAMN06562595	GCA_002080725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/080/725/GCA_002080725.1_ASM208072v1	-	7
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.093	39.6	-	FDKM01	20	2330	2080	2/6/16	3/13/17	Scaffold	SC	SAMEA2382891	GCA_900034415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/415/GCA_900034415.1_12718_5_61	-	2842STDY5753434
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA328077	328077	Proteobacteria	Gammaproteobacteria	4.87282	52.1	-	MAXX01	261	4863	4601	7/21/16	3/1/17	Scaffold	Sheba Medical Center	SAMN05363637	GCA_001691675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/675/GCA_001691675.1_ASM169167v1	-	150149475
Staphylococcus aureus	1280	PRJEB12950	361351	Terrabacteria group	Firmicutes	2.73913	32.7	-	FUHK01	24	2863	2702	2/8/17	3/6/17	Contig	Lausanne University Hospital	SAMEA48339418	GCA_900155845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/845/GCA_900155845.1_CHUV_11	-	-
Staphylococcus aureus	1280	PRJEB12950	361351	Terrabacteria group	Firmicutes	2.77068	32.7	-	FUHB01	31	2834	2690	2/8/17	3/6/17	Contig	Lausanne University Hospital	SAMEA48333418	GCA_900155875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/875/GCA_900155875.1_CHUV_3	-	-
Salmonella enterica subsp. enterica serovar Anatum	58712	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.81623	52.1	-	JWQQ01	33	4935	4711	9/15/16	3/1/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN03079707	GCA_001726095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/095/GCA_001726095.1_ASM172609v1	-	CFSAN024762
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10667	39.6	-	FDKT01	27	2320	2056	2/6/16	3/13/17	Scaffold	SC	SAMEA2382898	GCA_900034425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/425/GCA_900034425.1_12718_5_68	-	2842STDY5753441
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.12777	50.7	-	NCRQ01	17	5270	4908	4/12/17	4/17/17	Scaffold	Broad Institute	SAMN04606407	GCA_002087455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/455/GCA_002087455.1_ASM208745v1	-	OS_07_001_-1
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.27854	50.8	-	NCRP01	14	5502	5123	4/12/17	4/16/17	Scaffold	Broad Institute	SAMN04606406	GCA_002087465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/465/GCA_002087465.1_ASM208746v1	-	OS_07_001_6
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05987	39.5	-	FEHP01	38	2280	2035	2/9/16	3/13/17	Scaffold	SC	SAMEA2383097	GCA_900034445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/445/GCA_900034445.1_12754_2_77	-	2842STDY5753642
Salmonella enterica	28901	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	5.20584	51.9	-	MJEL01	63	5432	5147	9/23/16	3/1/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN05773530	GCA_001742445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/742/445/GCA_001742445.1_ASM174244v1	-	CFSAN055411
Staphylococcus aureus subsp. aureus	46170	PRJEB5715	248808	Terrabacteria group	Firmicutes	2.89354	32.7	-	CCCE01	57	3040	2907	5/27/14	3/4/17	Scaffold	NATIONALCENTERFORGENOMERESOURCES	SAMEA3139039	GCA_000723625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/625/GCA_000723625.1_MM25	-	MM25
Staphylococcus aureus subsp. aureus	46170	PRJEB5718	248816	Terrabacteria group	Firmicutes	2.94019	32.8	-	CCCI01	73	3127	2980	5/27/14	3/4/17	Scaffold	NATIONALCENTERFORGENOMERESOURCES	SAMEA3139049	GCA_000723825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/825/GCA_000723825.1_MM66-4	-	MM66-4
Salmonella enterica subsp. enterica serovar Javiana	363569	PRJNA344415	344415	Proteobacteria	Gammaproteobacteria	4.64205	52	-	MKLW01	89	4762	4441	1/6/17	3/2/17	Scaffold	University of Florida	SAMN05822326	GCA_001938795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/795/GCA_001938795.1_ASM193879v1	-	FLDOH-4
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07386	39.6	-	FEIK01	30	2298	2041	2/9/16	3/13/17	Scaffold	SC	SAMEA2383118	GCA_900034455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/455/GCA_900034455.1_12754_3_3	-	2842STDY5753664
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.19403	50.5	-	NCRR01	9	5388	5034	4/12/17	4/18/17	Scaffold	Broad Institute	SAMN04606408	GCA_002087505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/505/GCA_002087505.1_Esch_coli_OS_09_001_TOC1_V5	-	OS_09_001_TOC1
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.3786	50.6	-	NCRU01	23	5587	5204	4/12/17	4/16/17	Scaffold	Broad Institute	SAMN04606411	GCA_002087535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/535/GCA_002087535.1_ASM208753v1	-	OS_09_006_-1
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08534	39.6	-	FEIV01	28	2310	2057	2/9/16	3/12/17	Scaffold	SC	SAMEA2383129	GCA_900034465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/465/GCA_900034465.1_12754_3_14	-	2842STDY5753675
"Salmonella enterica subsp. arizonae serovar 18:z4,z23:- str. CVM N6509"	1395108	PRJNA292661	292661	Proteobacteria	Gammaproteobacteria	4.59701	51.5	-	AWRN01	79	4633	4164	1/13/17	3/2/17	Scaffold	FDA	SAMN02887274	GCA_001951385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/385/GCA_001951385.1_ASM195138v1	-	N6509
Staphylococcus aureus subsp. aureus	46170	PRJEB5719	248817	Terrabacteria group	Firmicutes	3.03261	33	-	CCCL01	81	3176	2986	5/27/14	3/4/17	Scaffold	NATIONALCENTERFORGENOMERESOURCES	SAMEA3139056	GCA_000723965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/965/GCA_000723965.1_MV8	-	MV8
Staphylococcus aureus subsp. aureus	46170	PRJEB5716	248815	Terrabacteria group	Firmicutes	2.96468	32.9	-	CCCA01	78	3115	2973	5/27/14	3/4/17	Scaffold	NATIONALCENTERFORGENOMERESOURCES	SAMEA3139066	GCA_000731175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/731/175/GCA_000731175.1_MM61	-	MM61
"Salmonella enterica subsp. arizonae serovar 18:z4,z23:- str. CVM N27"	1395106	PRJNA292661	292661	Proteobacteria	Gammaproteobacteria	4.59488	51.5	-	AWRP01	87	4629	4160	1/13/17	3/2/17	Scaffold	FDA	SAMN02887269	GCA_001951465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/465/GCA_001951465.1_ASM195146v1	-	N27
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09576	39.5	-	FEJD01	33	2318	2078	2/9/16	3/13/17	Scaffold	SC	SAMEA2383137	GCA_900034475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/475/GCA_900034475.1_12754_3_22	-	2842STDY5753683
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.35904	50.4	-	NCRV01	21	5432	5064	4/12/17	4/18/17	Scaffold	Broad Institute	SAMN04606412	GCA_002087555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/555/GCA_002087555.1_ASM208755v1	-	OS_01_020_10
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.46387	50.7	-	NCRX01	10	5718	5387	4/12/17	4/16/17	Scaffold	Broad Institute	SAMN04606414	GCA_002087565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/565/GCA_002087565.1_ASM208756v1	-	OS_02_021_10
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.97955	39.8	-	FEKR01	29	2206	1963	2/9/16	3/13/17	Scaffold	SC	SAMEA2383177	GCA_900034485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/485/GCA_900034485.1_12754_3_62	-	2842STDY5753723
"Salmonella enterica subsp. arizonae serovar 18:z4,z23:- str. CVM N20028"	1395114	PRJNA292661	292661	Proteobacteria	Gammaproteobacteria	4.48783	51.5	-	AWRH01	87	4494	4023	1/13/17	3/2/17	Scaffold	FDA	SAMN02887262	GCA_001951525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/525/GCA_001951525.1_ASM195152v1	-	N20028
Staphylococcus aureus subsp. aureus	46170	PRJNA255272	255272	Terrabacteria group	Firmicutes	2.7979	32.7	-	JPPU01	19	2962	2866	7/30/14	3/4/17	Scaffold	University of Rennes 1	SAMN02911820	GCA_000736455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/736/455/GCA_000736455.1_ASM73645v1	25169861	HG003
Staphylococcus aureus	1280	PRJNA272947	272947	Terrabacteria group	Firmicutes	2.7495	32.7	-	JXOB01	62	2867	2709	2/12/15	3/4/17	Scaffold	UERJ	SAMN03287942	GCA_000855655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/855/655/GCA_000855655.1_ASM85565v1	-	aless
"Salmonella enterica subsp. arizonae serovar 18:z4,z23:- str. CVM N7307"	1395109	PRJNA292661	292661	Proteobacteria	Gammaproteobacteria	4.85914	52.2	-	AWRM01	82	4968	4738	1/13/17	3/2/17	Scaffold	FDA	SAMN02887275	GCA_001951595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/595/GCA_001951595.1_ASM195159v1	-	N7307
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05203	39.8	-	FEMS01	23	2312	2072	2/9/16	3/13/17	Scaffold	SC	SAMEA2383232	GCA_900034495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/495/GCA_900034495.1_12754_4_22	-	2842STDY5753779
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.09369	50.4	-	NCRS01	11	5139	4808	4/12/17	4/16/17	Scaffold	Broad Institute	SAMN04606409	GCA_002087575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/575/GCA_002087575.1_ASM208757v1	-	OS_02_001_-1
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.24991	50.5	-	NCRT01	14	5404	5044	4/12/17	4/16/17	Scaffold	Broad Institute	SAMN04606410	GCA_002087615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/615/GCA_002087615.1_ASM208761v1	-	OS_02_042_-1
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1826	39.6	-	FEMT01	53	2386	2151	2/9/16	3/13/17	Scaffold	SC	SAMEA2383233	GCA_900034505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/505/GCA_900034505.1_12754_4_23	-	2842STDY5753780
"Salmonella enterica subsp. arizonae serovar 18:z4,z23:- str. CVM N5"	1395105	PRJNA292661	292661	Proteobacteria	Gammaproteobacteria	4.49121	51.5	-	AWRQ01	77	4492	4035	1/13/17	3/2/17	Scaffold	FDA	SAMN02887273	GCA_001951605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/605/GCA_001951605.1_ASM195160v1	-	N5
Staphylococcus aureus	1280	PRJNA269214	269214	Terrabacteria group	Firmicutes	2.87758	32.8	-	JYFP01	45	2996	2852	2/24/15	3/4/17	Scaffold	University of Malaya	SAMN03253089	GCA_000932245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/932/245/GCA_000932245.1_ASM93224v1	-	P180
Staphylococcus aureus	1280	PRJNA276072	276072	Terrabacteria group	Firmicutes	2.76277	32.7	-	JZAL01	24	2884	2765	3/16/15	3/4/17	Scaffold	"The University of Glasgow, Institute of Infection, Immunity and Inflammation "	SAMN03365925	GCA_000953985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/985/GCA_000953985.1_ASM95398v1	25931597	LHSKBClinical
"Salmonella enterica subsp. arizonae serovar 18:z4,z23:- str. CVM N9135"	1395110	PRJNA292661	292661	Proteobacteria	Gammaproteobacteria	4.49302	51.5	-	AWRL01	78	4494	4037	1/13/17	3/2/17	Scaffold	FDA	SAMN02887276	GCA_001951615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/615/GCA_001951615.1_ASM195161v1	-	N9135
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15575	39.6	-	FENX01	48	2351	2133	2/9/16	3/13/17	Scaffold	SC	SAMEA2383263	GCA_900034515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/515/GCA_900034515.1_12754_4_53	-	2842STDY5753810
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.97335	50.4	-	NCSA01	7	4966	4719	4/12/17	4/16/17	Scaffold	Broad Institute	SAMN04606421	GCA_002087635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/635/GCA_002087635.1_ASM208763v1	-	OS_09_001_15
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.96191	50.4	-	NCRY01	6	4942	4713	4/12/17	4/16/17	Scaffold	Broad Institute	SAMN04606417	GCA_002087695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/695/GCA_002087695.1_ASM208769v1	-	OS_09_001_14
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13918	39.5	-	FDJE01	42	2330	2076	2/6/16	3/13/17	Scaffold	SC	SAMEA2382856	GCA_900034955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/955/GCA_900034955.1_12718_5_26	-	2842STDY5753399
Salmonella enterica subsp. enterica serovar Infantis str. CVM N19983	1439834	PRJNA231478	231478	Proteobacteria	Gammaproteobacteria	4.79182	52.1	-	JAAQ01	79	4924	4658	1/13/17	3/2/17	Scaffold	FDA	SAMN02442746	GCA_001951675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/675/GCA_001951675.1_ASM195167v1	-	CVM N19983
Staphylococcus aureus LCT-SAO	1449975	PRJNA235239	235239	Terrabacteria group	Firmicutes	2.86535	32.8	-	JANM01	6	3009	2818	4/23/15	3/4/17	Scaffold	China CDC	SAMN02585131	GCA_000978705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/978/705/GCA_000978705.1_ASM97870v1	25304992	LCT-SAO
Staphylococcus aureus LCT-SAM	1449973	PRJNA235250	235250	Terrabacteria group	Firmicutes	2.79669	32.7	-	JANO01	52	2912	2759	4/23/15	3/4/17	Scaffold	China CDC	SAMN02585133	GCA_000978725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/978/725/GCA_000978725.1_ASM97872v1	25304992	LCT-SAM
Salmonella enterica subsp. enterica serovar Infantis str. CVM N20078	1439835	PRJNA231478	231478	Proteobacteria	Gammaproteobacteria	4.79373	52.3	-	JAAR01	81	4906	4653	1/13/17	3/2/17	Scaffold	FDA	SAMN02442747	GCA_001951685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/685/GCA_001951685.1_ASM195168v1	-	CVM N20078
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12235	39.7	-	FDQW01	44	2356	2109	2/9/16	3/13/17	Scaffold	SC	SAMEA2239164	GCA_900034975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/975/GCA_900034975.1_11860_8_30	-	2842STDY5644546
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.85598	50.6	-	NCSE01	6	4909	4628	4/12/17	4/17/17	Scaffold	Broad Institute	SAMN04606425	GCA_002087725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/725/GCA_002087725.1_ASM208772v1	-	UMB08_00uog
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.37015	50.6	-	NCSC01	9	5609	5245	4/12/17	4/16/17	Scaffold	Broad Institute	SAMN04606423	GCA_002087735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/735/GCA_002087735.1_ASM208773v1	-	OS_02_035_15
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07982	39.7	-	FDVX01	36	2314	2064	2/9/16	3/13/17	Scaffold	SC	SAMEA2238295	GCA_900034985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/985/GCA_900034985.1_11860_4_20	-	2842STDY5643664
Salmonella enterica subsp. enterica serovar Infantis str. CVM N23771	1439838	PRJNA231478	231478	Proteobacteria	Gammaproteobacteria	4.85757	52.3	-	JAAU01	52	4977	4727	1/13/17	3/2/17	Scaffold	FDA	SAMN02442750	GCA_001951695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/695/GCA_001951695.1_ASM195169v1	-	CVM N23771
Staphylococcus aureus subsp. aureus	46170	PRJNA266317	266317	Terrabacteria group	Firmicutes	2.9439	32.8	-	JTJX02	118	3113	2950	7/2/15	3/5/17	Scaffold	FDA	SAMN03161113	GCA_001045615.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/045/615/GCA_001045615.2_ASM104561v2	26868381	#32S
Staphylococcus aureus	1280	PRJNA247762	247762	Terrabacteria group	Firmicutes	2.96512	32.8	-	LALU01	412	3009	2878	7/2/15	3/4/17	Scaffold	South American MRSA Consortium	SAMN02780896	GCA_001046035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/046/035/GCA_001046035.1_ASM104603v1	26048971	V1859
Salmonella enterica subsp. enterica serovar Infantis str. CVM N20272	1439836	PRJNA231478	231478	Proteobacteria	Gammaproteobacteria	4.85835	52.3	-	JAAS01	70	4983	4724	1/13/17	3/2/17	Scaffold	FDA	SAMN02442748	GCA_001951755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/755/GCA_001951755.1_ASM195175v1	-	CVM N20272
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98693	39.7	-	FCWC01	22	2184	1959	2/6/16	3/13/17	Scaffold	SC	SAMEA2238907	GCA_900034995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/034/995/GCA_900034995.1_11861_3_55	-	2842STDY5644282
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.085	50.5	-	NCSG01	3	5166	4849	4/12/17	4/16/17	Scaffold	Broad Institute	SAMN04606427	GCA_002087775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/775/GCA_002087775.1_ASM208777v1	-	UMB08_02.1uog
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.94527	50.6	-	NCSH01	3	5033	4663	4/12/17	4/16/17	Scaffold	Broad Institute	SAMN04606428	GCA_002087785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/785/GCA_002087785.1_ASM208778v1	-	OS_09_001_-1.0
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1565	39.6	-	FDEX01	50	2384	2129	2/6/16	3/13/17	Scaffold	SC	SAMEA2382739	GCA_900035005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/005/GCA_900035005.1_12718_4_4	-	2842STDY5753281
Salmonella enterica subsp. enterica serovar Infantis str. CVM N29304	1436135	PRJNA231478	231478	Proteobacteria	Gammaproteobacteria	4.61965	52.3	-	AZNJ01	60	4685	4439	1/13/17	3/2/17	Scaffold	FDA	SAMN02442753	GCA_001951785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/785/GCA_001951785.1_ASM195178v1	-	CVM N29304
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.73427	32.6	-	JWGC01	145	2845	2735	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03196980	GCA_001060135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/135/GCA_001060135.1_ASM106013v1	26230489	1018_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.06725	32.7	-	JVZL01	93	3226	3084	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197153	GCA_001060505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/505/GCA_001060505.1_ASM106050v1	26230489	1193_SAUR
Salmonella enterica subsp. enterica serovar Infantis str. CVM N26093	1436137	PRJNA231478	231478	Proteobacteria	Gammaproteobacteria	4.59982	52.3	-	AZNK01	46	4633	4402	1/13/17	3/2/17	Scaffold	FDA	SAMN02442752	GCA_001951835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/835/GCA_001951835.1_ASM195183v1	-	CVM N26093
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11804	39.6	-	FDHJ01	29	2326	2078	2/6/16	3/13/17	Scaffold	SC	SAMEA2382803	GCA_900035015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/015/GCA_900035015.1_12718_4_68	-	2842STDY5753345
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.95309	50.4	-	NCSI01	6	4952	4718	4/12/17	4/16/17	Scaffold	Broad Institute	SAMN04606429	GCA_002087815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/815/GCA_002087815.1_ASM208781v1	-	OS_09_001_-1.1
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.83116	50.6	-	NCSF01	7	4894	4623	4/12/17	4/16/17	Scaffold	Broad Institute	SAMN04606426	GCA_002087825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/825/GCA_002087825.1_ASM208782v1	-	UMB08_01.1uog
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02161	39.7	-	FDIS01	22	2226	2022	2/6/16	3/13/17	Scaffold	SC	SAMEA2382843	GCA_900035025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/025/GCA_900035025.1_12718_5_13	-	2842STDY5753386
Salmonella enterica	28901	PRJNA237790	237790	Proteobacteria	Gammaproteobacteria	4.85715	52	-	JHAQ01	60	4992	4749	1/13/17	3/2/17	Scaffold	FDA/CVM	SAMN02639615	GCA_001951845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/845/GCA_001951845.1_ASM195184v1	-	CVM 32452
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.06399	32.7	-	JVZK01	92	3232	3086	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197154	GCA_001060535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/535/GCA_001060535.1_ASM106053v1	26230489	1194_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.86516	32.6	-	JVXX01	175	3012	2881	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197193	GCA_001060615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/615/GCA_001060615.1_ASM106061v1	26230489	1229_SAUR
Salmonella enterica	28901	PRJNA237790	237790	Proteobacteria	Gammaproteobacteria	4.97336	52.2	-	JHAO01	53	5130	4886	1/13/17	3/2/17	Scaffold	FDA/CVM	SAMN02639613	GCA_001951875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/875/GCA_001951875.1_ASM195187v1	-	CVM 21382
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.9922	39.8	-	FDJO01	43	2190	1936	2/6/16	3/13/17	Scaffold	SC	SAMEA2382866	GCA_900035035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/035/GCA_900035035.1_12718_5_36	-	2842STDY5753409
Escherichia coli	562	PRJNA379934	379934	Proteobacteria	Gammaproteobacteria	4.6855	50.7144	plasmid pATCC10798_F:NZ_CM007847.1/CM007847.1	NARG01	63	4908	4596	4/12/17	4/16/17	Scaffold	Loyola University Chicago	SAMN06624121	GCA_002087985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/087/985/GCA_002087985.1_ASM208798v1	-	ATCC 10798
Escherichia coli C	498388	PRJNA314810	314810	Proteobacteria	Gammaproteobacteria	4.53299	50.7	-	MNKV01	149	4638	4362	4/14/17	4/19/17	Scaffold	UC San Diego	SAMN04543843	GCA_002092895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/895/GCA_002092895.1_ASM209289v1	27667363	C
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04059	39.7	-	FDNC01	27	2248	2021	2/6/16	3/13/17	Scaffold	SC	SAMEA2382962	GCA_900035045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/045/GCA_900035045.1_12754_1_37	-	2842STDY5753506
Salmonella enterica	28901	PRJNA237790	237790	Proteobacteria	Gammaproteobacteria	4.8167	52	-	JHAS01	106	4924	4662	1/13/17	3/2/17	Scaffold	FDA/CVM	SAMN02639636	GCA_001951915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/915/GCA_001951915.1_ASM195191v1	-	CVM N17
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.77752	32.6	-	JVWO01	118	2895	2788	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197228	GCA_001060705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/705/GCA_001060705.1_ASM106070v1	26230489	1260_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.87278	32.6	-	JVVO01	127	3007	2881	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197254	GCA_001060795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/795/GCA_001060795.1_ASM106079v1	26230489	1283_SAUR
Salmonella enterica	28901	PRJNA237790	237790	Proteobacteria	Gammaproteobacteria	4.87268	52.1	-	JHAT01	66	5010	4763	1/13/17	3/2/17	Scaffold	FDA/CVM	SAMN02639617	GCA_001951925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/925/GCA_001951925.1_ASM195192v1	-	CVM N18372
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05867	39.5	-	FEHO01	40	2264	2035	2/9/16	3/13/17	Scaffold	SC	SAMEA2383096	GCA_900035055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/055/GCA_900035055.1_12754_2_76	-	2842STDY5753641
Escherichia coli	562	PRJNA382429	382429	Proteobacteria	Gammaproteobacteria	5.19806	50.3	-	NDBC01	110	5360	4926	4/21/17	4/24/17	Scaffold	University of Sao Paulo	SAMN06706363	GCA_002104125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/125/GCA_002104125.1_ASM210412v1	-	EM1CRO
Escherichia coli	562	PRJNA382427	382427	Proteobacteria	Gammaproteobacteria	4.77665	50.8	-	NDBB01	87	4950	4625	4/21/17	4/24/17	Scaffold	University of Sao Paulo	SAMN06706332	GCA_002104225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/225/GCA_002104225.1_ASM210422v1	-	C60
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10196	39.6	-	FEHR01	32	2313	2063	2/9/16	3/13/17	Scaffold	SC	SAMEA2383099	GCA_900035065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/065/GCA_900035065.1_12754_2_79	-	2842STDY5753644
Salmonella enterica	28901	PRJNA237790	237790	Proteobacteria	Gammaproteobacteria	5.13581	51.9	-	JHAW01	96	5300	5024	1/13/17	3/2/17	Scaffold	FDA/CVM	SAMN02639620	GCA_001951935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/935/GCA_001951935.1_ASM195193v1	-	CVM N19977
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.73197	32.7	-	JWGD01	149	2840	2728	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03196979	GCA_001060875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/875/GCA_001060875.1_ASM106087v1	26230489	1017_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.73589	32.6	-	JWCJ01	117	2840	2728	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197077	GCA_001061065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/065/GCA_001061065.1_ASM106106v1	26230489	1122_SAUR
Salmonella enterica	28901	PRJNA237790	237790	Proteobacteria	Gammaproteobacteria	5.01471	51.9	-	JHAR01	97	5117	4853	1/13/17	3/2/17	Scaffold	FDA/CVM	SAMN02639616	GCA_001951945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/945/GCA_001951945.1_ASM195194v1	-	CVM N13150
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.17564	39.7	-	FEIL01	72	2411	2153	2/9/16	3/13/17	Scaffold	SC	SAMEA2383119	GCA_900035075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/075/GCA_900035075.1_12754_3_4	-	2842STDY5753665
Escherichia coli	562	PRJNA382704	382704	Proteobacteria	Gammaproteobacteria	5.47172	50.4	-	NCWA01	199	5821	5251	4/21/17	4/24/17	Scaffold	University of Sao Paulo	SAMN06712365	GCA_002104405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/405/GCA_002104405.1_ASM210440v1	-	6M
Escherichia coli	562	PRJNA382712	382712	Proteobacteria	Gammaproteobacteria	5.1137	50.7	-	NCVZ01	128	5356	4956	4/21/17	4/24/17	Scaffold	University of Sao Paulo	SAMN06712614	GCA_002104485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/485/GCA_002104485.1_ASM210448v1	-	MO
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12134	39.6	-	FEKG01	32	2360	2128	2/9/16	3/13/17	Scaffold	SC	SAMEA2383166	GCA_900035085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/085/GCA_900035085.1_12754_3_51	-	2842STDY5753712
Salmonella enterica	28901	PRJNA237790	237790	Proteobacteria	Gammaproteobacteria	4.84418	52	-	JHAV01	59	4985	4728	1/13/17	3/2/17	Scaffold	FDA/CVM	SAMN02639619	GCA_001951995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/951/995/GCA_001951995.1_ASM195199v1	-	CVM N18457
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.71965	32.7	-	JWBA01	70	2799	2688	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197112	GCA_001061155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/155/GCA_001061155.1_ASM106115v1	26230489	1156_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.77339	32.6	-	JVWM01	150	2883	2777	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197230	GCA_001061375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/375/GCA_001061375.1_ASM106137v1	26230489	1262_SAUR
"Salmonella enterica subsp. arizonae serovar 18:z4,z23:- str. CVM N29354"	1395121	PRJNA292661	292661	Proteobacteria	Gammaproteobacteria	4.48976	51.5	-	AWRA01	81	4486	4029	1/13/17	3/2/17	Scaffold	FDA	SAMN05201526	GCA_001952125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/125/GCA_001952125.1_ASM195212v1	-	CVM N29354
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99238	39.8	-	FEMZ01	52	2197	1928	2/9/16	3/6/17	Scaffold	SC	SAMEA2383239	GCA_900035095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/095/GCA_900035095.1_12754_4_29	-	2842STDY5753786
Escherichia coli	562	PRJNA382713	382713	Proteobacteria	Gammaproteobacteria	4.96106	50.7	-	NCVY01	133	5193	4745	4/21/17	4/24/17	Scaffold	University of Sao Paulo	SAMN06712615	GCA_002104645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/104/645/GCA_002104645.1_ASM210464v1	-	TM2CRO
Escherichia coli	562	PRJNA374651	374651	Proteobacteria	Gammaproteobacteria	4.78695	50.8	-	MVIN01	146	4981	4634	4/25/17	4/27/17	Scaffold	Agroscope	SAMN06344340	GCA_002109445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/445/GCA_002109445.1_ASM210944v1	28439262	FAM21843
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09199	39.5	-	FENG01	44	2324	2092	2/9/16	3/5/17	Scaffold	SC	SAMEA2383246	GCA_900035105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/105/GCA_900035105.1_12754_4_36	-	2842STDY5753793
"Salmonella enterica subsp. arizonae serovar 18:z4,z23:- str. CVM 32457"	1395104	PRJNA292661	292661	Proteobacteria	Gammaproteobacteria	4.61351	51.5	-	AWRR01	88	4648	4184	1/13/17	3/2/17	Scaffold	FDA	SAMN02887258	GCA_001952135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/135/GCA_001952135.1_ASM195213v1	-	32457
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.85223	32.6	-	JVWI01	183	2987	2864	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197234	GCA_001061385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/385/GCA_001061385.1_ASM106138v1	26230489	1266_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.7788	32.6	-	JVVW01	133	2904	2801	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197246	GCA_001061405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/405/GCA_001061405.1_ASM106140v1	26230489	1276_SAUR
Salmonella enterica subsp. enterica serovar Infantis str. CVM N38848	1439848	PRJNA231478	231478	Proteobacteria	Gammaproteobacteria	4.56234	52.3	-	JABF01	46	4590	4366	1/13/17	3/2/17	Scaffold	FDA	SAMN02442763	GCA_001952165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/165/GCA_001952165.1_ASM195216v1	-	CVM N38848
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07656	39.6	-	FEOM01	36	2253	2012	2/9/16	3/13/17	Scaffold	SC	SAMEA2674626	GCA_900035115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/115/GCA_900035115.1_14412_3_4	-	2842STDY5881886
Escherichia coli	562	PRJNA374651	374651	Proteobacteria	Gammaproteobacteria	4.78953	50.9	-	MVEA01	155	5030	4651	4/25/17	4/27/17	Scaffold	Agroscope	SAMN06329919	GCA_002109485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/485/GCA_002109485.1_ASM210948v1	28439262	FAM21805
Escherichia coli FVEC1465	656381	PRJNA38967	38967	Proteobacteria	Gammaproteobacteria	5.26688	50.6	-	ADIJ01	57	5544	4994	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392827	GCA_002109565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/565/GCA_002109565.1_ASM210956v1	-	FVEC1465
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.97266	39.7	-	FDPH01	25	2167	1936	2/9/16	3/13/17	Scaffold	SC	SAMEA2383023	GCA_900035305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/305/GCA_900035305.1_12754_2_3	-	2842STDY5753568
Salmonella enterica subsp. enterica serovar Infantis str. CVM N42236	1439850	PRJNA231478	231478	Proteobacteria	Gammaproteobacteria	4.80492	52.3	-	JABH01	63	4910	4659	1/13/17	3/2/17	Scaffold	FDA	SAMN02442765	GCA_001952225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/225/GCA_001952225.1_ASM195222v1	-	CVM N42236
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.70556	32.7	-	JVTW01	542	2855	2612	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197298	GCA_001061545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/545/GCA_001061545.1_ASM106154v1	26230489	1320_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.71956	32.7	-	JVTT01	109	2786	2668	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197301	GCA_001061555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/555/GCA_001061555.1_ASM106155v1	26230489	1322_2_SAUR
Salmonella enterica	28901	PRJNA237790	237790	Proteobacteria	Gammaproteobacteria	4.94172	51.9	-	JHAX01	49	5027	4783	1/13/17	3/2/17	Scaffold	FDA/CVM	SAMN02639638	GCA_001952235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/235/GCA_001952235.1_ASM195223v1	-	CVM N19978
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11606	39.6	-	FDVE01	34	2316	2080	2/9/16	3/18/17	Scaffold	SC	SAMEA2239296	GCA_900035315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/315/GCA_900035315.1_11861_5_71	-	2842STDY5644680
Escherichia coli R527	656424	PRJNA39053	39053	Proteobacteria	Gammaproteobacteria	5.2275	50.6	-	ADII01	57	5454	5009	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392826	GCA_002109575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/575/GCA_002109575.1_ASM210957v1	-	R527
Escherichia coli M056	656415	PRJNA39035	39035	Proteobacteria	Gammaproteobacteria	5.56219	50.5	-	ADIK01	160	5850	5267	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392828	GCA_002109605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/605/GCA_002109605.1_ASM210960v1	-	M056
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99063	39.8	-	FDRN01	46	2192	1925	2/9/16	3/13/17	Scaffold	SC	SAMEA2239143	GCA_900035335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/335/GCA_900035335.1_11860_8_9	-	2842STDY5644525
Salmonella enterica	28901	PRJNA237790	237790	Proteobacteria	Gammaproteobacteria	4.88649	52	-	JHAZ01	73	5008	4756	1/13/17	3/2/17	Scaffold	FDA/CVM	SAMN02639622	GCA_001952285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/285/GCA_001952285.1_ASM195228v1	-	CVM N23600
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.76477	32.7	-	JVSK01	61	2863	2741	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197336	GCA_001061695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/695/GCA_001061695.1_ASM106169v1	26230489	147_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.84103	32.8	-	JWCG01	119	2966	2841	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197080	GCA_001061995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/061/995/GCA_001061995.1_ASM106199v1	26230489	1125_SAUR
Salmonella enterica	28901	PRJNA237790	237790	Proteobacteria	Gammaproteobacteria	4.87843	52.1	-	JHBB01	57	5010	4772	1/13/17	3/2/17	Scaffold	FDA/CVM	SAMN02639624	GCA_001952295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/295/GCA_001952295.1_ASM195229v1	-	CVM N27359
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08406	39.5	-	FEBK01	33	2250	2024	2/9/16	3/13/17	Scaffold	SC	SAMEA2238546	GCA_900035345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/345/GCA_900035345.1_11860_6_80	-	2842STDY5643917
Escherichia coli B108	550673	PRJNA38909	38909	Proteobacteria	Gammaproteobacteria	5.23991	50.4	-	ADIO01	90	5453	5052	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392832	GCA_002109615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/615/GCA_002109615.1_ASM210961v1	-	B108
Escherichia coli H588	656407	PRJNA39019	39019	Proteobacteria	Gammaproteobacteria	4.72779	50.7	-	ADIQ01	15	4836	4531	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392834	GCA_002109645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/645/GCA_002109645.1_ASM210964v1	-	H588
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04594	39.7	-	FCUH01	27	2271	2040	2/6/16	3/13/17	Scaffold	SC	SAMEA2238833	GCA_900035355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/355/GCA_900035355.1_11893_1_74	-	2842STDY5644207
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA237790	237790	Proteobacteria	Gammaproteobacteria	4.77655	52.1	-	JHBD01	40	4870	4635	1/13/17	3/2/17	Scaffold	FDA/CVM	SAMN05201601	GCA_001952325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/325/GCA_001952325.1_ASM195232v1	-	CVM N31386
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.73589	32.6	-	JWBT01	143	2843	2724	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197093	GCA_001062035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/035/GCA_001062035.1_ASM106203v1	26230489	1139.rep1_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.82667	32.7	-	JWAX01	121	2963	2859	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197115	GCA_001062115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/115/GCA_001062115.1_ASM106211v1	26230489	1159_SAUR
Salmonella enterica	28901	PRJNA237790	237790	Proteobacteria	Gammaproteobacteria	4.6894	52	-	JHAU01	281	4929	4556	1/13/17	3/2/17	Scaffold	FDA/CVM	SAMN02639618	GCA_001952385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/385/GCA_001952385.1_ASM195238v1	-	CVM N18382
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1212	39.4	-	FCXO01	70	2323	2051	2/6/16	3/13/17	Scaffold	SC	SAMEA2382585	GCA_900035365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/365/GCA_900035365.1_12673_6_40	-	2842STDY5753125
Escherichia coli B671	550680	PRJNA38925	38925	Proteobacteria	Gammaproteobacteria	5.10745	50.7	-	ADIP01	38	5274	4892	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392833	GCA_002109655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/655/GCA_002109655.1_ASM210965v1	-	B671
Escherichia coli H413	656399	PRJNA39003	39003	Proteobacteria	Gammaproteobacteria	5.12866	50.6	-	ADIR01	35	5351	4904	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392835	GCA_002109685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/685/GCA_002109685.1_ASM210968v1	-	H413
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99449	39.8	-	FCXQ01	47	2197	1933	2/6/16	8/21/17	Scaffold	SC	SAMEA2238955	GCA_900035375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/375/GCA_900035375.1_11861_4_6	-	2842STDY5644331
Salmonella enterica	28901	PRJNA237790	237790	Proteobacteria	Gammaproteobacteria	4.81568	52.1	-	JHBM01	50	4932	4692	1/13/17	3/2/17	Scaffold	FDA/CVM	SAMN02639635	GCA_001952395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/395/GCA_001952395.1_ASM195239v1	-	CVM N7328
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.85778	32.7	-	JWAH01	84	3011	2900	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197131	GCA_001062155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/155/GCA_001062155.1_ASM106215v1	26230489	1174_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.84392	32.8	-	JWAC01	72	2929	2808	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197136	GCA_001062195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/195/GCA_001062195.1_ASM106219v1	26230489	1179_SAUR
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA237790	237790	Proteobacteria	Gammaproteobacteria	4.79324	52.1	-	JHBE01	35	4905	4663	1/13/17	3/2/17	Scaffold	FDA/CVM	SAMN05201712	GCA_001952405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/405/GCA_001952405.1_ASM195240v1	-	CVM N37914
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02584	39.7	-	FDHL01	51	2214	1964	2/6/16	3/13/17	Scaffold	SC	SAMEA2382805	GCA_900035385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/385/GCA_900035385.1_12718_4_70	-	2842STDY5753347
Escherichia coli E1114	550691	PRJNA38937	38937	Proteobacteria	Gammaproteobacteria	5.23351	50.6	-	ADIT01	108	5593	4955	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392837	GCA_002109705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/705/GCA_002109705.1_ASM210970v1	-	E1114
Escherichia coli E560	550688	PRJNA38951	38951	Proteobacteria	Gammaproteobacteria	4.70461	50.7	-	ADIU01	28	4808	4479	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392838	GCA_002109725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/725/GCA_002109725.1_ASM210972v1	-	E560
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98819	39.8	-	FDQI01	44	2191	1929	2/9/16	3/13/17	Scaffold	SC	SAMEA2383050	GCA_900035395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/395/GCA_900035395.1_12754_2_30	-	2842STDY5753595
Salmonella enterica	28901	PRJNA237790	237790	Proteobacteria	Gammaproteobacteria	5.04793	51.8	-	JHAY01	137	5199	4895	1/13/17	3/2/17	Scaffold	FDA/CVM	SAMN02639621	GCA_001952415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/415/GCA_001952415.1_ASM195241v1	-	CVM N20030
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.77867	32.6	-	JVWU01	156	2901	2794	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197222	GCA_001062455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/455/GCA_001062455.1_ASM106245v1	26230489	1255_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.79663	32.7	-	JVWQ01	117	2895	2735	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197226	GCA_001062485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/485/GCA_001062485.1_ASM106248v1	26230489	1259_SAUR
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA237790	237790	Proteobacteria	Gammaproteobacteria	4.75544	52.1	-	JHBF01	56	4844	4614	1/13/17	3/2/17	Scaffold	FDA/CVM	SAMN05201916	GCA_001952475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/475/GCA_001952475.1_ASM195247v1	-	CVM N41751
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.17421	39.6	-	FFSY01	86	2395	2142	2/10/16	3/5/17	Scaffold	SC	SAMEA2203837	GCA_900035605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/605/GCA_900035605.1_11679_1_25	-	2245STDY5608976
Escherichia coli E1002	550690	PRJNA38933	38933	Proteobacteria	Gammaproteobacteria	4.72342	50.7	-	ADJA01	36	4866	4499	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392844	GCA_002109745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/745/GCA_002109745.1_ASM210974v1	-	E1002
Escherichia coli H305	656394	PRJNA38993	38993	Proteobacteria	Gammaproteobacteria	5.22708	50.6	-	ADJD01	58	5478	5048	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392847	GCA_002109765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/765/GCA_002109765.1_ASM210976v1	-	H305
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04912	39.8	-	FHFN01	32	2244	2027	2/10/16	3/18/17	Scaffold	SC	SAMEA2203889	GCA_900035625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/625/GCA_900035625.1_11511_8_37	-	2245STDY5609029
Salmonella enterica	28901	PRJNA237790	237790	Proteobacteria	Gammaproteobacteria	4.89085	52	-	JHBL01	47	5020	4777	1/13/17	3/2/17	Scaffold	FDA/CVM	SAMN02639634	GCA_001952485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/485/GCA_001952485.1_ASM195248v1	-	CVM N662
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.77828	32.6	-	JVWN01	147	2901	2793	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197229	GCA_001062495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/495/GCA_001062495.1_ASM106249v1	26230489	1261_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.75168	32.6	-	JVVF01	138	2861	2743	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197263	GCA_001062615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/615/GCA_001062615.1_ASM106261v1	26230489	1291_SAUR
Salmonella enterica	28901	PRJNA237790	237790	Proteobacteria	Gammaproteobacteria	4.71235	52.2	-	JHBA01	77	4805	4549	1/13/17	3/2/17	Scaffold	FDA/CVM	SAMN02639623	GCA_001952495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/495/GCA_001952495.1_ASM195249v1	-	CVM N25385
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.02927	39.8	-	FHFP01	35	2225	1994	2/10/16	3/13/17	Scaffold	SC	SAMEA2203891	GCA_900035635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/635/GCA_900035635.1_11511_8_38	-	2245STDY5609031
Escherichia coli H296	656392	PRJNA38989	38989	Proteobacteria	Gammaproteobacteria	5.30194	50.6	-	ADJC01	56	5575	5148	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392846	GCA_002109775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/775/GCA_002109775.1_ASM210977v1	-	H296
Escherichia coli H617	656411	PRJNA39027	39027	Proteobacteria	Gammaproteobacteria	5.4795	50.6	-	ADJF01	100	5849	5184	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392849	GCA_002109805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/805/GCA_002109805.1_ASM210980v1	-	H617
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13088	39.6	-	FCRX01	55	2379	2131	2/6/16	3/13/17	Scaffold	SC	SAMEA2239031	GCA_900036055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/055/GCA_900036055.1_11861_4_85	-	2842STDY5644409
Salmonella enterica	28901	PRJNA237790	237790	Proteobacteria	Gammaproteobacteria	5.09235	51.8	-	JHBC01	53	5231	4973	1/13/17	3/2/17	Scaffold	FDA/CVM	SAMN02639625	GCA_001952545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/545/GCA_001952545.1_ASM195254v1	-	CVM N28605
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.75774	32.7	-	JVTY01	117	2820	2689	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197296	GCA_001062705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/705/GCA_001062705.1_ASM106270v1	26230489	1319_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.79235	32.8	-	JVTS01	74	2843	2726	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197302	GCA_001062735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/735/GCA_001062735.1_ASM106273v1	26230489	1322_SAUR
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA237790	237790	Proteobacteria	Gammaproteobacteria	4.78416	52	-	JHBG01	68	4870	4635	1/13/17	3/2/17	Scaffold	FDA/CVM	SAMN05201953	GCA_001952565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/565/GCA_001952565.1_ASM195256v1	-	CVM N42242
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07848	39.7	-	FCWJ01	35	2309	2059	2/6/16	3/13/17	Scaffold	SC	SAMEA2238918	GCA_900036065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/065/GCA_900036065.1_11861_3_66	-	2842STDY5644293
Escherichia coli B175	550675	PRJNA38913	38913	Proteobacteria	Gammaproteobacteria	4.81308	50.8	-	ADJE01	51	4951	4623	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392848	GCA_002109815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/815/GCA_002109815.1_ASM210981v1	-	B175
Escherichia coli TA464	656448	PRJNA39101	39101	Proteobacteria	Gammaproteobacteria	5.10934	50.4	-	ADJU01	36	5280	4827	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392852	GCA_002109865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/865/GCA_002109865.1_ASM210986v1	-	TA464
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06125	39.6	-	FDKO01	16	2275	2050	2/6/16	3/13/17	Scaffold	SC	SAMEA2382892	GCA_900036075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/075/GCA_900036075.1_12718_5_62	-	2842STDY5753435
Salmonella enterica	28901	PRJNA237790	237790	Proteobacteria	Gammaproteobacteria	4.76777	52.1	-	JHBN01	69	4872	4628	1/13/17	3/2/17	Scaffold	FDA/CVM	SAMN02639637	GCA_001952625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/952/625/GCA_001952625.1_ASM195262v1	-	CVM N9110
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.87762	32.6	-	JVPO01	213	3015	2903	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197410	GCA_001062965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/062/965/GCA_001062965.1_ASM106296v1	26230489	218_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.75148	32.6	-	JVEF01	99	2829	2701	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197705	GCA_001063595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/595/GCA_001063595.1_ASM106359v1	26230489	511_SAUR
Salmonella enterica subsp. houtenae serovar 40gt:-	1925258	PRJNA354076	354076	Proteobacteria	Gammaproteobacteria	4.6932	51.7	-	MQNH01	76	4736	4329	1/17/17	3/2/17	Scaffold	Massey University	SAMN06041138	GCA_001953515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/515/GCA_001953515.1_ASM195351v1	-	GSB1245
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10553	39.6	-	FDKS01	41	2324	2081	2/6/16	3/13/17	Scaffold	SC	SAMEA2382897	GCA_900036085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/085/GCA_900036085.1_12718_5_67	-	2842STDY5753440
Escherichia coli TA008	656430	PRJNA39065	39065	Proteobacteria	Gammaproteobacteria	5.3363	50.5	-	ADKA01	100	5654	4992	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392858	GCA_002109875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/875/GCA_002109875.1_ASM210987v1	-	TA008
Escherichia coli TA014	656431	PRJNA39067	39067	Proteobacteria	Gammaproteobacteria	4.72627	50.7	-	ADKC01	17	4781	4471	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392860	GCA_002109905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/905/GCA_002109905.1_ASM210990v1	-	TA014
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06271	39.6	-	FDNF01	22	2281	2047	2/6/16	3/13/17	Scaffold	SC	SAMEA2382965	GCA_900036095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/095/GCA_900036095.1_12754_1_40	-	2842STDY5753509
Salmonella enterica subsp. houtenae serovar 40gt:-	1925258	PRJNA354076	354076	Proteobacteria	Gammaproteobacteria	4.71066	51.7	-	MQNI01	80	4812	4316	1/17/17	3/2/17	Scaffold	Massey University	SAMN06041139	GCA_001953525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/525/GCA_001953525.1_ASM195352v1	-	SR15
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.72961	32.7	-	JVBR01	96	2798	2680	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197771	GCA_001063705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/705/GCA_001063705.1_ASM106370v1	26230489	57_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.72157	32.7	-	JVRM01	70	2799	2677	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197360	GCA_001063885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/885/GCA_001063885.1_ASM106388v1	26230489	169_SAUR
Salmonella enterica subsp. houtenae serovar 40gt:-	1925258	PRJNA354076	354076	Proteobacteria	Gammaproteobacteria	4.68608	51.7	-	MQNJ01	77	4734	4308	1/17/17	3/2/17	Scaffold	Massey University	SAMN06041140	GCA_001953555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/953/555/GCA_001953555.1_ASM195355v1	-	SR63
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0549	39.5	-	FDNM01	29	2276	2039	2/6/16	3/13/17	Scaffold	SC	SAMEA2382972	GCA_900036105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/105/GCA_900036105.1_12754_1_47	-	2842STDY5753516
Escherichia coli TA249	656441	PRJNA39087	39087	Proteobacteria	Gammaproteobacteria	5.24657	50.4	-	ADKD01	36	5421	5059	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392861	GCA_002109925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/925/GCA_002109925.1_ASM210992v1	-	TA249
Escherichia coli T426	656427	PRJNA39059	39059	Proteobacteria	Gammaproteobacteria	5.10192	50.6	-	ADKE01	74	5382	4901	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392862	GCA_002109945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/945/GCA_002109945.1_ASM210994v1	-	T426
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07053	39.5	-	FDQL01	85	2291	2021	2/9/16	3/5/17	Scaffold	SC	SAMEA2383053	GCA_900036115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/115/GCA_900036115.1_12754_2_33	-	2842STDY5753598
"Salmonella enterica subsp. arizonae serovar 18:z4,z23:- str. CVM N26928"	1395120	PRJNA292661	292661	Proteobacteria	Gammaproteobacteria	4.48866	51.5	-	AWRB01	73	4491	4027	1/25/17	3/2/17	Scaffold	FDA	SAMN02887268	GCA_001970905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/970/905/GCA_001970905.1_ASM197090v1	-	N26928
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.73479	32.7	-	JVRI01	105	2813	2666	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197364	GCA_001063895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/895/GCA_001063895.1_ASM106389v1	26230489	173_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.92405	32.6	-	JVQO01	100	3081	2965	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197384	GCA_001063955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/063/955/GCA_001063955.1_ASM106395v1	26230489	192_SAUR
Salmonella enterica subsp. enterica serovar Infantis str. CVM N29379	1439839	PRJNA231478	231478	Proteobacteria	Gammaproteobacteria	4.9291	52.2	-	JAAW01	68	5065	4807	1/25/17	3/2/17	Scaffold	FDA	SAMN02442754	GCA_001970975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/970/975/GCA_001970975.1_CLC_Genomic_Workbench	-	CVM N29379
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98819	39.8	-	FEHV01	47	2184	1935	2/9/16	3/8/17	Scaffold	SC	SAMEA2383103	GCA_900036125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/125/GCA_900036125.1_12754_2_83	-	2842STDY5753648
Escherichia coli E704	550689	PRJNA38953	38953	Proteobacteria	Gammaproteobacteria	4.61787	50.9	-	ADKF01	29	4867	4286	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392863	GCA_002109965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/965/GCA_002109965.1_ASM210996v1	-	E704
Escherichia coli E1118	656371	PRJNA38939	38939	Proteobacteria	Gammaproteobacteria	4.62971	50.5	-	ADKG01	35	4662	4264	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392864	GCA_002109985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/109/985/GCA_002109985.1_ASM210998v1	-	E1118
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99375	39.7	-	FELR01	25	2194	1970	2/9/16	3/13/17	Scaffold	SC	SAMEA2383203	GCA_900036135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/135/GCA_900036135.1_12754_3_88	-	2842STDY5753749
Salmonella enterica subsp. enterica serovar Infantis str. CVM N32760	1439844	PRJNA231478	231478	Proteobacteria	Gammaproteobacteria	4.64838	52.3	-	JABB01	54	4719	4474	1/25/17	3/2/17	Scaffold	FDA	SAMN02442759	GCA_001971045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/045/GCA_001971045.1_CLC_Genomic_Workbench	-	CVM N32760
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.73894	32.8	-	JVPF01	118	2813	2677	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197419	GCA_001064055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/055/GCA_001064055.1_ASM106405v1	26230489	229_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.75058	32.7	-	JVPE01	90	2841	2740	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197420	GCA_001064065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/065/GCA_001064065.1_ASM106406v1	26230489	23_SAUR
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA46571	46571	Proteobacteria	Gammaproteobacteria	4.80234	52.1	-	MTKU01	14	4828	4574	1/30/17	3/2/17	Scaffold	Michigan State University	SAMN06234784	GCA_001974765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/974/765/GCA_001974765.1_ASM197476v1	-	MN25
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.14846	39.5	-	FEOS01	45	2364	2090	2/9/16	3/8/17	Scaffold	SC	SAMEA2674650	GCA_900036145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/145/GCA_900036145.1_14412_3_28	-	2842STDY5881910
Escherichia coli R424	656423	PRJNA39051	39051	Proteobacteria	Gammaproteobacteria	5.08503	50.7	-	ADMR01	50	5433	5001	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392865	GCA_002110005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/005/GCA_002110005.1_ASM211000v1	-	R424
Escherichia coli TA144	656438	PRJNA39081	39081	Proteobacteria	Gammaproteobacteria	4.73309	50.7	-	ADIL01	52	4892	4486	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392829	GCA_002110025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/025/GCA_002110025.1_ASM211002v1	-	TA144
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02749	39.7	-	FDRK01	48	2209	1966	2/9/16	3/13/17	Scaffold	SC	SAMEA2239149	GCA_900036165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/165/GCA_900036165.1_11860_8_15	-	2842STDY5644531
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA341407	341407	Proteobacteria	Gammaproteobacteria	4.89224	52.2	-	MTFW01	81	5023	4787	2/13/17	2/22/17	Scaffold	California Department of Public Health	SAMN05721772	GCA_001997115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/115/GCA_001997115.1_ASM199711v1	-	ATCC 14028
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.8668	32.6	-	JVOI01	179	3013	2883	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197442	GCA_001064135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/135/GCA_001064135.1_ASM106413v1	26230489	251_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.70968	32.8	-	JVOD01	94	2808	2705	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197447	GCA_001064175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/175/GCA_001064175.1_ASM106417v1	26230489	256_SAUR
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA341407	341407	Proteobacteria	Gammaproteobacteria	4.64739	52.3	-	MTGO01	59	4711	4463	2/13/17	2/22/17	Scaffold	California Department of Public Health	SAMN05721790	GCA_001997485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/485/GCA_001997485.1_ASM199748v1	-	CDPH_C74
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0675	39.6	-	FDZW01	31	2264	2029	2/9/16	3/13/17	Scaffold	SC	SAMEA2238476	GCA_900036175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/175/GCA_900036175.1_11860_6_10	-	2842STDY5643847
Escherichia coli B574	550679	PRJNA38921	38921	Proteobacteria	Gammaproteobacteria	5.04351	50.7	-	ADIM01	36	5239	4871	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392830	GCA_002110045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/045/GCA_002110045.1_ASM211004v1	-	B574
Escherichia coli E267	550686	PRJNA38947	38947	Proteobacteria	Gammaproteobacteria	4.37707	51	-	ADIN01	38	4801	4098	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392831	GCA_002110065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/065/GCA_002110065.1_ASM211006v1	-	E267
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1027	39.6	-	FECR01	36	2306	2052	2/9/16	3/15/17	Scaffold	SC	SAMEA2238599	GCA_900036185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/185/GCA_900036185.1_11861_1_36	-	2842STDY5643971
Salmonella enterica subsp. enterica serovar Worthington	1160769	PRJNA341407	341407	Proteobacteria	Gammaproteobacteria	4.9243	52.2	-	MTGQ01	57	5023	4751	2/13/17	2/22/17	Scaffold	California Department of Public Health	SAMN05721792	GCA_001997835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/835/GCA_001997835.1_ASM199783v1	-	CDPH_C76
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.7342	32.7	-	JVNR01	120	2834	2722	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197459	GCA_001064215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/215/GCA_001064215.1_ASM106421v1	26230489	266_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.88401	32.7	-	JVNO01	70	3019	2896	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197462	GCA_001064255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/255/GCA_001064255.1_ASM106425v1	26230489	269_SAUR
Salmonella enterica subsp. enterica serovar Adelaide	29473	PRJNA341407	341407	Proteobacteria	Gammaproteobacteria	4.55368	52.3	-	MTGP01	33	4625	4401	2/13/17	3/2/17	Scaffold	California Department of Public Health	SAMN05721791	GCA_001999405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/999/405/GCA_001999405.1_ASM199940v1	-	CDPH_C75
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04297	39.6	-	FEFK01	33	2253	2010	2/9/16	3/13/17	Scaffold	SC	SAMEA2238731	GCA_900036195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/195/GCA_900036195.1_11861_2_71	-	2842STDY5644104
Escherichia coli H001	656382	PRJNA38969	38969	Proteobacteria	Gammaproteobacteria	5.04563	50.6	-	ADIW01	62	5196	4847	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392840	GCA_002110085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/085/GCA_002110085.1_ASM211008v1	-	H001
Escherichia coli B921	550683	PRJNA38931	38931	Proteobacteria	Gammaproteobacteria	4.89384	50.6	-	ADIS01	51	5076	4633	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392836	GCA_002110105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/105/GCA_002110105.1_ASM211010v1	-	B921
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11869	39.5	-	FEMH01	55	2345	2084	2/9/16	3/6/17	Scaffold	SC	SAMEA2383221	GCA_900036205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/205/GCA_900036205.1_12754_4_11	-	2842STDY5753768
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.8924	52.2	-	MWVC01	240	5100	4761	3/13/17	3/15/17	Scaffold	University of California at Davis	SAMN06448806	GCA_002025495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/025/495/GCA_002025495.1_ASM202549v1	-	LT2 KO STM2896::STM0928
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.82741	32.7	-	JVNF01	82	2953	2824	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197471	GCA_001064295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/295/GCA_001064295.1_ASM106429v1	26230489	278_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.86878	32.6	-	JVLM01	107	3007	2888	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197516	GCA_001064555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/555/GCA_001064555.1_ASM106455v1	26230489	326_SAUR
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89326	52.2	-	MXAZ01	50	4991	4778	3/15/17	3/17/17	Scaffold	University of California at Davis	SAMN05200445	GCA_002028585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/585/GCA_002028585.1_ASM202858v1	-	LT2 KO_STM3537
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99423	39.8	-	FENE01	54	2210	1930	2/9/16	3/12/17	Scaffold	SC	SAMEA2383244	GCA_900036215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/215/GCA_900036215.1_12754_4_34	-	2842STDY5753791
Escherichia coli H378	656395	PRJNA38995	38995	Proteobacteria	Gammaproteobacteria	5.34391	50.5	-	ADIX01	81	5597	5130	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392841	GCA_002110115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/115/GCA_002110115.1_ASM211011v1	-	H378
Escherichia coli B367	550678	PRJNA38919	38919	Proteobacteria	Gammaproteobacteria	5.14116	50.5	-	ADIY01	47	5257	4927	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392842	GCA_002110145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/145/GCA_002110145.1_ASM211014v1	-	B367
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05884	39.6	-	FEPA01	34	2283	2021	2/9/16	3/13/17	Scaffold	SC	SAMEA2674690	GCA_900036225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/225/GCA_900036225.1_14412_3_57	-	2842STDY5881940
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89456	52.2	-	MXBA01	63	4999	4771	3/15/17	3/17/17	Scaffold	University of California at Davis	SAMN06448815	GCA_002028595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/595/GCA_002028595.1_ASM202859v1	-	LT2 KO_STM0233
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.74833	32.7	-	JVFH01	162	2822	2666	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197677	GCA_001065195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/195/GCA_001065195.1_ASM106519v1	26230489	484_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.71954	32.8	-	JVFC01	59	2782	2680	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197682	GCA_001065215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/215/GCA_001065215.1_ASM106521v1	26230489	49_SAUR
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89563	52.2	-	MXBB01	61	5002	4782	3/15/17	3/17/17	Scaffold	University of California at Davis	SAMN06448816	GCA_002028625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/625/GCA_002028625.1_ASM202862v1	-	LT2 KO_STM0907
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99191	39.8	-	FFRA01	48	2182	1937	2/9/16	3/13/17	Scaffold	SC	SAMEA2203779	GCA_900036435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/435/GCA_900036435.1_11679_1_7	-	2245STDY5608918
Escherichia coli H461	656403	PRJNA39011	39011	Proteobacteria	Gammaproteobacteria	5.30495	50.7	-	ADJV01	44	5566	5171	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392853	GCA_002110165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/165/GCA_002110165.1_ASM211016v1	-	H461
Escherichia coli TA447	656447	PRJNA39099	39099	Proteobacteria	Gammaproteobacteria	5.46402	50.5	-	ADIZ01	93	5738	5281	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392843	GCA_002110175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/175/GCA_002110175.1_ASM211017v1	-	TA447
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.10564	39.6	-	FFSC01	41	2298	2079	2/10/16	3/6/17	Scaffold	SC	SAMEA2203811	GCA_900036445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/445/GCA_900036445.1_11657_8_9	-	2245STDY5608950
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89278	52.2	-	MXAY01	65	4993	4765	3/15/17	3/17/17	Scaffold	University of California at Davis	SAMN05200444	GCA_002028635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/635/GCA_002028635.1_ASM202863v1	-	LT2 KO_STM3664
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.75312	32.7	-	JVEG01	114	2831	2699	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197704	GCA_001065285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/285/GCA_001065285.1_ASM106528v1	26230489	510_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.68568	32.7	-	JVDA01	99	2750	2654	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197736	GCA_001065355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/355/GCA_001065355.1_ASM106535v1	26230489	54_SAUR
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89424	52.2	-	MXBC01	63	5009	4778	3/15/17	3/17/17	Scaffold	University of California at Davis	SAMN06448817	GCA_002028675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/028/675/GCA_002028675.1_ASM202867v1	-	LT2 KO_STM1560
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0464	39.7	-	FFSK01	106	2198	1977	2/10/16	3/13/17	Scaffold	SC	SAMEA2203821	GCA_900036455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/455/GCA_900036455.1_11679_1_17	-	2245STDY5608960
Escherichia coli TA255	656442	PRJNA39089	39089	Proteobacteria	Gammaproteobacteria	4.90833	50.6	-	ADJG01	26	4949	4585	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392850	GCA_002110185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/185/GCA_002110185.1_ASM211018v1	-	TA255
Escherichia coli H383	656396	PRJNA38997	38997	Proteobacteria	Gammaproteobacteria	5.42196	50.5	-	ADJW01	137	5912	5267	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392854	GCA_002110225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/225/GCA_002110225.1_ASM211022v1	-	H383
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99475	39.8	-	FFSR01	48	2182	1931	2/10/16	3/13/17	Scaffold	SC	SAMEA2203829	GCA_900036465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/465/GCA_900036465.1_11679_1_21	-	2245STDY5608968
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89443	52.2	-	MWQW01	60	5000	4781	3/15/17	3/22/17	Scaffold	University of California at Davis	SAMN05200448	GCA_002029365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/365/GCA_002029365.1_ASM202936v1	-	LT2 KO STM0928
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.04447	32.8	-	JVBM01	91	3168	2987	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197776	GCA_001065475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/475/GCA_001065475.1_ASM106547v1	26230489	573_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.77433	32.7	-	JVBB01	147	2880	2734	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197787	GCA_001065555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/555/GCA_001065555.1_ASM106555v1	26230489	586_SAUR
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.8951	52.2	-	MWQQ01	65	5001	4777	3/15/17	3/22/17	Scaffold	University of California at Davis	SAMN06392997	GCA_002029375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/375/GCA_002029375.1_ASM202937v1	-	LT2 KO STM3338
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.12068	39.6	-	FFSS01	33	2311	2074	2/10/16	3/13/17	Scaffold	SC	SAMEA2203831	GCA_900036475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/475/GCA_900036475.1_11679_1_23	-	2245STDY5608970
Escherichia coli H605	656410	PRJNA39025	39025	Proteobacteria	Gammaproteobacteria	4.49571	50.5	-	ADJX01	29	4488	4195	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392855	GCA_002110245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/245/GCA_002110245.1_ASM211024v1	-	H605
Escherichia coli H420	656400	PRJNA39005	39005	Proteobacteria	Gammaproteobacteria	5.18197	50.6	-	ADJZ01	80	5459	4980	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392857	GCA_002110265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/265/GCA_002110265.1_ASM211026v1	-	H420
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11127	39.6	-	FDTJ01	39	2361	2097	2/9/16	3/13/17	Scaffold	SC	SAMEA2239220	GCA_900036515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/515/GCA_900036515.1_11860_8_88	-	2842STDY5644602
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89269	52.2	-	MWQR01	74	5011	4782	3/15/17	3/22/17	Scaffold	University of California at Davis	SAMN06392998	GCA_002029385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/385/GCA_002029385.1_ASM202938v1	-	LT2 KO STM2896::STM1252
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.8934	32.6	-	JVAL01	223	3075	2917	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197803	GCA_001065595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/595/GCA_001065595.1_ASM106559v1	26230489	602_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.68912	32.7	-	JUWZ01	98	2768	2655	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197893	GCA_001065975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/065/975/GCA_001065975.1_ASM106597v1	26230489	69_SAUR
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89471	52.2	-	MWQV01	57	5002	4776	3/15/17	3/22/17	Scaffold	University of California at Davis	SAMN05200447	GCA_002029395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/395/GCA_002029395.1_ASM202939v1	-	LT2 KO STM1252
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98002	39.8	-	FCWN01	19	2207	1957	2/6/16	3/6/17	Scaffold	SC	SAMEA2238924	GCA_900036535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/535/GCA_900036535.1_11861_3_72	-	2842STDY5644299
Escherichia coli H454	656402	PRJNA39009	39009	Proteobacteria	Gammaproteobacteria	4.90411	50.7	-	ADJY01	40	5122	4743	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392856	GCA_002110275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/275/GCA_002110275.1_ASM211027v1	-	H454
Escherichia coli TA054	656433	PRJNA39071	39071	Proteobacteria	Gammaproteobacteria	5.26051	50.4	-	ADKB01	39	5369	4973	4/25/17	4/27/17	Scaffold	Broad Institute	SAMN06392859	GCA_002110285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/285/GCA_002110285.1_ASM211028v1	-	TA054
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99073	39.8	-	FCYB01	45	2193	1927	2/6/16	3/13/17	Scaffold	SC	SAMEA2238970	GCA_900036545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/545/GCA_900036545.1_11861_4_22	-	2842STDY5644346
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89396	52.2	-	MWQU01	54	4997	4777	3/15/17	3/17/17	Scaffold	University of California at Davis	SAMN06393001	GCA_002029445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/445/GCA_002029445.1_ASM202944v1	-	LT2 KO STM0928::STM1252
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.83656	32.7	-	JUSB01	92	2996	2853	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03198021	GCA_001066345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/345/GCA_001066345.1_ASM106634v1	26230489	807_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.71195	32.7	-	JURY01	166	2822	2711	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03198024	GCA_001066355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/355/GCA_001066355.1_ASM106635v1	26230489	810_SAUR
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.87064	52.2	-	MWQS01	72	4979	4751	3/15/17	3/17/17	Scaffold	University of California at Davis	SAMN06392999	GCA_002029455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/455/GCA_002029455.1_ASM202945v1	-	LT2 KO STM4298::STM0928
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01534	39.7	-	FDBD01	25	2256	2012	2/6/16	3/13/17	Scaffold	SC	SAMEA2382640	GCA_900036555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/555/GCA_900036555.1_12673_6_95	-	2842STDY5753180
Escherichia coli H386	656397	PRJNA38999	38999	Proteobacteria	Gammaproteobacteria	5.34202	50.5	-	ADJB01	166	5721	5161	4/25/17	5/1/17	Scaffold	Broad Institute	SAMN06392845	GCA_002110545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/545/GCA_002110545.1_ASM211054v1	-	H386
Escherichia coli H223	656387	PRJNA38979	38979	Proteobacteria	Gammaproteobacteria	5.1325	50.6	-	ADIV01	79	5282	4862	4/25/17	5/1/17	Scaffold	Broad Institute	SAMN06392839	GCA_002110555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/110/555/GCA_002110555.1_ASM211055v1	-	H223
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04053	39.6	-	FDBN01	25	2248	2013	2/6/16	3/13/17	Scaffold	SC	SAMEA2382650	GCA_900036565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/565/GCA_900036565.1_12673_7_10	-	2842STDY5753191
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.8954	52.2	-	MWQT01	59	4998	4778	3/15/17	3/17/17	Scaffold	University of California at Davis	SAMN06393000	GCA_002029485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/485/GCA_002029485.1_ASM202948v1	-	LT2 KO STM4298::STM1252
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.87574	32.6	-	JURT01	123	3044	2894	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03198029	GCA_001066425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/425/GCA_001066425.1_ASM106642v1	26230489	815_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.73246	32.7	-	JURO01	69	2807	2684	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03198034	GCA_001066495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/495/GCA_001066495.1_ASM106649v1	26230489	82_SAUR
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89628	52.2	-	MZNJ01	64	5000	4781	3/16/17	3/18/17	Scaffold	University of California at Davis	SAMN06448808	GCA_002029665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/665/GCA_002029665.1_ASM202966v1	-	LT2 KO_STM3538
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11872	39.5	-	FDJR01	54	2329	2082	2/6/16	3/13/17	Scaffold	SC	SAMEA2382869	GCA_900036575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/575/GCA_900036575.1_12718_5_39	-	2842STDY5753412
Escherichia coli	562	PRJNA382723	382723	Proteobacteria	Gammaproteobacteria	4.72787	50.6	-	NDYX01	164	4924	4522	4/28/17	5/3/17	Scaffold	University of Sao Paulo	SAMN06717780	GCA_002115565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/115/565/GCA_002115565.1_ASM211556v1	-	MM
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.05196	50.9	-	NGRX01	21	5104	4698	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521876	GCA_002152015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/015/GCA_002152015.1_ASM215201v1	-	BWH69
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99631	39.7	-	FDKQ01	24	2208	1948	2/6/16	3/13/17	Scaffold	SC	SAMEA2382895	GCA_900036585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/585/GCA_900036585.1_12718_5_65	-	2842STDY5753438
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.8937	52.2	-	MZNK01	61	4998	4779	3/16/17	3/18/17	Scaffold	University of California at Davis	SAMN06448809	GCA_002029675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/675/GCA_002029675.1_ASM202967v1	-	LT2 KO_STM2896::KO_STM3664
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.68663	32.7	-	JUWO01	98	2768	2657	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197904	GCA_001066985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/066/985/GCA_001066985.1_ASM106698v1	26230489	70_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.88465	32.8	-	JUVU01	71	2989	2873	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197924	GCA_001067075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/075/GCA_001067075.1_ASM106707v1	26230489	72_SAUR
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89206	52.2	-	MZNM01	58	4992	4774	3/16/17	3/18/17	Scaffold	University of California at Davis	SAMN06448807	GCA_002029705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/705/GCA_002029705.1_ASM202970v1	-	LT2 KO_STM1963
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99123	39.8	-	FDMN01	47	2195	1940	2/6/16	3/13/17	Scaffold	SC	SAMEA2382947	GCA_900036595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/595/GCA_900036595.1_12754_1_22	-	2842STDY5753491
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.49123	50.7	-	NGRY01	13	5518	5170	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521881	GCA_002152025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/025/GCA_002152025.1_ASM215202v1	-	MGH130
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.24534	50.8	-	NGSC01	12	5345	4905	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521918	GCA_002152065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/065/GCA_002152065.1_ASM215206v1	-	MGH169
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12051	39.6	-	FDNE01	40	2371	2107	2/6/16	3/13/17	Scaffold	SC	SAMEA2382964	GCA_900036605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/605/GCA_900036605.1_12754_1_39	-	2842STDY5753508
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89678	52.2	-	MZNL01	57	5004	4773	3/16/17	3/18/17	Scaffold	University of California at Davis	SAMN06448810	GCA_002029715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/715/GCA_002029715.1_ASM202971v1	-	LT2 KO_STM1182::KO_STM3664
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.83339	32.7	-	JUUG01	121	2990	2818	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197964	GCA_001067185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/185/GCA_001067185.1_ASM106718v1	26230489	756_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.77309	32.7	-	JUTG01	58	2863	2757	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197990	GCA_001067295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/295/GCA_001067295.1_ASM106729v1	26230489	78_SAUR
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89478	52.2	-	MZNN01	68	4997	4778	3/16/17	3/18/17	Scaffold	University of California at Davis	SAMN06448811	GCA_002029745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/745/GCA_002029745.1_ASM202974v1	-	LT2 KO_STM1028
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99247	39.8	-	FEEW01	45	2198	1937	2/9/16	3/6/17	Scaffold	SC	SAMEA2238706	GCA_900036655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/655/GCA_900036655.1_11861_2_46	-	2842STDY5644079
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.29383	50.8	-	NGSA01	8	5431	5080	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521893	GCA_002152075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/075/GCA_002152075.1_ASM215207v1	-	MGH144
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.58329	50.6	-	NGRW01	13	5759	5331	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521875	GCA_002152115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/115/GCA_002152115.1_ASM215211v1	-	BWH68
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11092	39.6	-	FEGS01	47	2311	2073	2/9/16	3/13/17	Scaffold	SC	SAMEA2383074	GCA_900036665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/665/GCA_900036665.1_12754_2_54	-	2842STDY5753619
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89482	52.2	-	MZNO01	66	5002	4782	3/16/17	3/18/17	Scaffold	University of California at Davis	SAMN06448812	GCA_002029765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/765/GCA_002029765.1_ASM202976v1	-	LT2 KO_STM2612
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.80335	32.8	-	JURZ01	70	2905	2778	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03198023	GCA_001067415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/415/GCA_001067415.1_ASM106741v1	26230489	81_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.72663	32.7	-	JURU01	97	2840	2726	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03198028	GCA_001067445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/445/GCA_001067445.1_ASM106744v1	26230489	814_SAUR
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.8946	52.2	-	MZNP01	67	4998	4774	3/16/17	3/18/17	Scaffold	University of California at Davis	SAMN06448813	GCA_002029785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/785/GCA_002029785.1_ASM202978v1	-	LT2 KO_STM2715.S
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11251	39.6	-	FENH01	48	2348	2101	2/9/16	3/13/17	Scaffold	SC	SAMEA2383247	GCA_900036675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/675/GCA_900036675.1_12754_4_37	-	2842STDY5753794
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.49653	50.7	-	NGSE01	13	5614	5191	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521928	GCA_002152135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/135/GCA_002152135.1_ASM215213v1	-	MGH179
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.13327	50.4	-	NGSD01	7	5254	4919	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521919	GCA_002152145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/145/GCA_002152145.1_ASM215214v1	-	MGH170
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07565	39.7	-	FEOJ01	34	2292	2055	2/9/16	3/13/17	Scaffold	SC	SAMEA2674611	GCA_900036685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/685/GCA_900036685.1_14355_8_84	-	2842STDY5881871
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89305	52.2	-	MZNQ01	61	5007	4784	3/16/17	3/18/17	Scaffold	University of California at Davis	SAMN06448814	GCA_002029795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/795/GCA_002029795.1_ASM202979v1	-	LT2 KO_STM0018
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.76224	32.7	-	JURB01	98	2860	2741	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03198047	GCA_001067505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/505/GCA_001067505.1_ASM106750v1	26230489	84_SAUR
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.91487	32.6	-	JUMC01	127	3080	2954	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03198176	GCA_001068265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/068/265/GCA_001068265.1_ASM106826v1	26230489	956_SAUR
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89394	52.2	-	MZNS01	65	5000	4775	3/16/17	3/18/17	Scaffold	University of California at Davis	SAMN06448819	GCA_002029825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/825/GCA_002029825.1_ASM202982v1	-	LT2 KO_STM3603
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.05162	39.7	-	FFQR01	35	2259	2026	2/9/16	3/13/17	Scaffold	SC	SAMEA2203768	GCA_900036955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/955/GCA_900036955.1_11511_8_4	-	2245STDY5608907
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.43598	50.9	-	NGSJ01	46	5331	4870	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521854	GCA_002152175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/175/GCA_002152175.1_ASM215217v1	-	UCI104
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.62527	50.6	-	NGSI01	16	5618	5148	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521853	GCA_002152185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/185/GCA_002152185.1_ASM215218v1	-	UCI103
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.1606	39.5	-	FFQV01	81	2373	2069	2/9/16	3/13/17	Scaffold	SC	SAMEA2203769	GCA_900036965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/965/GCA_900036965.1_11679_1_2	-	2245STDY5608908
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89248	52.2	-	MZNR01	68	5003	4782	3/16/17	3/18/17	Scaffold	University of California at Davis	SAMN06448818	GCA_002029835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/029/835/GCA_002029835.1_ASM202983v1	-	LT2 KO_STM1796
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	2.91922	32.7	-	JVFO01	76	3048	2907	7/10/15	3/4/17	Scaffold	University of Washington	SAMN03197670	GCA_001076515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/515/GCA_001076515.1_ASM107651v1	26230489	478_SAUR
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92307	32.7	-	CSFB01	35	3115	2961	3/23/15	3/4/17	Scaffold	SC	SAMEA1324737	GCA_001191895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/191/895/GCA_001191895.1_7748_4_25	-	USFL024
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.75316	52	-	MZNY01	154	4815	4555	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073080	GCA_002037825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/825/GCA_002037825.1_ASM203782v1	28705959	CFSAN057625
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09254	39.6	-	FFRL01	33	2279	2065	2/9/16	6/9/17	Scaffold	SC	SAMEA2203791	GCA_900036985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/985/GCA_900036985.1_11679_1_10	-	2245STDY5608930
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.78385	50.9	-	NGSF01	6	4758	4483	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521929	GCA_002152215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/215/GCA_002152215.1_ASM215221v1	-	MGH180
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	4.8163	50.6	-	NGSH01	11	4818	4532	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521937	GCA_002152225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/225/GCA_002152225.1_ASM215222v1	-	MGH188
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.22258	39.5	-	FFRN01	216	2419	2148	2/9/16	6/9/17	Scaffold	SC	SAMEA2203793	GCA_900036995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/995/GCA_900036995.1_11511_8_11	-	2245STDY5608932
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69839	52.1	-	MZOC01	32	4809	4569	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073832	GCA_002037835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/835/GCA_002037835.1_ASM203783v1	28705959	CFSAN057629
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.82667	32.7	-	CSLR01	52	2940	2768	3/22/15	3/4/17	Scaffold	SC	SAMEA1463397	GCA_001192075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/075/GCA_001192075.1_7907_7_88	-	BSAR194_2
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.89275	32.6	-	CSEM01	38	3048	2904	3/23/15	3/4/17	Scaffold	SC	SAMEA1710086	GCA_001192095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/095/GCA_001192095.1_9266_1_4	-	FL358
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70299	52.1	-	MZOD01	34	4798	4569	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073824	GCA_002037865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/865/GCA_002037865.1_ASM203786v1	28705959	CFSAN057630
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.05913	39.8	-	FFRT01	77	2250	2015	2/10/16	3/5/17	Scaffold	SC	SAMEA2203800	GCA_900037005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/005/GCA_900037005.1_11679_1_13	-	2245STDY5608939
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.11339	50.3	-	NGSL01	6	5209	4911	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521872	GCA_002152255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/255/GCA_002152255.1_ASM215225v1	-	UCI122
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.97033	51	-	NGSK01	56	5707	5102	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521871	GCA_002152275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/275/GCA_002152275.1_ASM215227v1	-	UCI121
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.14351	39.5	-	FFRY01	100	2363	2088	2/10/16	3/13/17	Scaffold	SC	SAMEA2203805	GCA_900037015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/015/GCA_900037015.1_11657_4_12	-	2245STDY5608944
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70051	52.1	-	MZOG01	30	4806	4569	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073797	GCA_002037885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/885/GCA_002037885.1_ASM203788v1	28705959	CFSAN057633
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.8725	32.6	-	CSJN01	91	3041	2903	3/23/15	3/4/17	Scaffold	SC	SAMEA1710106	GCA_001192155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/155/GCA_001192155.1_9235_1_17	-	FL392
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.95948	32.7	-	CSGC01	27	3158	2980	3/23/15	3/4/17	Scaffold	SC	SAMEA1324516	GCA_001192675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/675/GCA_001192675.1_9669_1_3	-	USFL204
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70134	52.1	-	MZOB01	34	4808	4566	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073851	GCA_002037895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/895/GCA_002037895.1_ASM203789v1	28705959	CFSAN057628
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99294	39.8	-	FFSB01	51	2183	1930	2/10/16	3/13/17	Scaffold	SC	SAMEA2203810	GCA_900037025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/025/GCA_900037025.1_11679_1_15	-	2245STDY5608949
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.45416	50.3	-	NGRV01	17	5458	5079	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521847	GCA_002152995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/152/995/GCA_002152995.1_ASM215299v1	-	BIDMC115
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.42633	50.8	-	NGRZ01	19	5550	5140	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521892	GCA_002153005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/005/GCA_002153005.1_ASM215300v1	-	MGH143
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.05984	39.6	-	FFSP01	44	2252	2016	2/10/16	3/5/17	Scaffold	SC	SAMEA2203827	GCA_900037035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/035/GCA_900037035.1_11657_8_12	-	2245STDY5608966
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.67284	52.1	-	MZNZ01	32	4770	4534	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073876	GCA_002037905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/905/GCA_002037905.1_ASM203790v1	28705959	CFSAN057626
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.80564	32.7	-	CSNX01	37	2939	2752	3/22/15	3/4/17	Scaffold	SC	SAMEA1708990	GCA_001192895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/192/895/GCA_001192895.1_8987_2_6	-	BSAR747
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87068	32.6	-	CSCV01	60	3020	2896	3/23/15	3/4/17	Scaffold	SC	SAMEA1710102	GCA_001194525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/525/GCA_001194525.1_9235_1_1	-	FL376
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70036	52.1	-	MZOK01	33	4804	4567	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073984	GCA_002037945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/945/GCA_002037945.1_ASM203794v1	28705959	CFSAN057637
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06127	39.6	-	FFSN01	44	2239	2021	2/10/16	3/6/17	Scaffold	SC	SAMEA2203826	GCA_900037045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/045/GCA_900037045.1_11658_2_92	-	2245STDY5608965
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.28493	50.7	-	NGSB01	20	5404	4999	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521912	GCA_002153015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/015/GCA_002153015.1_ASM215301v1	-	MGH163
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.4279	50.6	-	NGSG01	8	5618	5228	5/19/17	5/24/17	Scaffold	Broad Institute	SAMN04521936	GCA_002153055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/153/055/GCA_002153055.1_ASM215305v1	-	MGH187
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.2014	39.6	-	FFSV01	135	2395	2135	2/10/16	3/13/17	Scaffold	SC	SAMEA2203834	GCA_900037055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/055/GCA_900037055.1_11679_1_24	-	2245STDY5608973
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70221	52.1	-	MZOE01	37	4800	4571	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073814	GCA_002037965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/965/GCA_002037965.1_ASM203796v1	28705959	CFSAN057631
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88057	32.6	-	CSDQ01	44	3024	2894	3/23/15	3/4/17	Scaffold	SC	SAMEA1710081	GCA_001194825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/825/GCA_001194825.1_9266_1_14	-	FL368
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.76391	32.7	-	CSLQ01	45	2833	2685	3/22/15	3/4/17	Scaffold	SC	SAMEA1463435	GCA_001195105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/105/GCA_001195105.1_7907_7_60	-	BSAR163_2
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.6993	52.1	-	MZOH01	35	4807	4570	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073788	GCA_002037985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/985/GCA_002037985.1_ASM203798v1	28705959	CFSAN057634
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.24376	39.7	-	FFSX01	326	2440	2102	2/10/16	3/12/17	Scaffold	SC	SAMEA2203836	GCA_900037065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/065/GCA_900037065.1_11657_4_18	-	2245STDY5608975
Escherichia coli	562	PRJNA275512	275512	Proteobacteria	Gammaproteobacteria	4.73533	50.7	-	MSQY01	160	4969	4598	5/22/17	5/24/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06197015	GCA_002154035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/035/GCA_002154035.1_ASM215403v1	-	WCHEC1614
Escherichia coli	562	PRJNA275512	275512	Proteobacteria	Gammaproteobacteria	4.87455	50.7	-	MSRB01	116	5078	4721	5/22/17	5/24/17	Scaffold	"West China Hospital, Sichuan University"	SAMN05938917	GCA_002154075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/075/GCA_002154075.1_ASM215407v1	-	WCHEC1606
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.03857	39.7	-	FFTU01	35	2238	1990	2/10/16	3/5/17	Scaffold	SC	SAMEA2203863	GCA_900037075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/075/GCA_900037075.1_11657_4_26	-	2245STDY5609003
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69959	52.1	-	MZOJ01	33	4802	4562	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073985	GCA_002037995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/037/995/GCA_002037995.1_ASM203799v1	28705959	CFSAN057636
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.80073	32.7	-	CSPJ01	32	2881	2743	3/22/15	3/4/17	Scaffold	SC	SAMEA1463416	GCA_001195205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/205/GCA_001195205.1_7907_7_57	-	BSAR160_2
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88245	32.6	-	CSBR01	22	3054	2896	3/23/15	3/4/17	Scaffold	SC	SAMEA1710115	GCA_001196435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/435/GCA_001196435.1_9266_1_9	-	FL363
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69834	52.1	-	MZOL01	28	4799	4569	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073983	GCA_002038025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/025/GCA_002038025.1_ASM203802v1	28705959	CFSAN057638
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06892	39.6	-	FDYZ01	21	2307	2077	2/9/16	3/18/17	Scaffold	SC	SAMEA2238432	GCA_900037115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/115/GCA_900037115.1_11860_5_63	-	2842STDY5643802
Escherichia coli	562	PRJNA275512	275512	Proteobacteria	Gammaproteobacteria	4.99567	50.7	-	MSQX01	194	5219	4825	5/22/17	5/24/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06197013	GCA_002154095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/095/GCA_002154095.1_ASM215409v1	-	WCHEC1609
Escherichia coli	562	PRJNA275512	275512	Proteobacteria	Gammaproteobacteria	4.91929	50.6	-	MSRA01	181	5161	4797	5/22/17	5/24/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06197017	GCA_002154135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/154/135/GCA_002154135.1_ASM215413v1	-	WCHEC1622
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01676	39.8	-	FEBJ01	20	2248	2009	2/9/16	3/13/17	Scaffold	SC	SAMEA2238544	GCA_900037125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/125/GCA_900037125.1_11860_6_78	-	2842STDY5643915
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69954	52.1	-	MZOM01	32	4801	4546	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073982	GCA_002038035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/035/GCA_002038035.1_ASM203803v1	28705959	CFSAN057639
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.86478	32.6	-	CSDI01	77	3013	2886	3/23/15	3/4/17	Scaffold	SC	SAMEA1710083	GCA_001198115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/115/GCA_001198115.1_9235_1_9	-	FL384
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.86424	32.6	-	CSFX01	51	3015	2894	3/23/15	3/4/17	Scaffold	SC	SAMEA1710104	GCA_001200635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/200/635/GCA_001200635.1_9235_1_16	-	FL391
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.64412	52.1	-	MZOS01	31	4731	4490	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073976	GCA_002038055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/055/GCA_002038055.1_ASM203805v1	28705959	CFSAN057645
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05985	39.5	-	FCUR01	35	2284	2037	2/6/16	3/13/17	Scaffold	SC	SAMEA2382555	GCA_900037135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/135/GCA_900037135.1_12673_6_10	-	2842STDY5753095
Escherichia coli	562	PRJNA275512	275512	Proteobacteria	Gammaproteobacteria	5.42164	50.3	-	MUWZ01	143	5652	5310	5/22/17	5/24/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06197012	GCA_002155015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/155/015/GCA_002155015.1_ASM215501v1	-	WCHEC1604
Escherichia coli	562	PRJDB5772	387340	Proteobacteria	Gammaproteobacteria	5.03156	50.4996	plasmid pMTY17668-MCR1.5:NZ_AP018110.1/AP018110.1	BDSB01	99	5294	4834	5/23/17	8/14/17	Scaffold	Toho University	SAMD00080331	GCA_002157815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/157/815/GCA_002157815.1_ASM215781v1	-	TUM17668
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11328	39.6	-	FCWH01	45	2310	2055	2/6/16	3/13/17	Scaffold	SC	SAMEA2238916	GCA_900037145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/145/GCA_900037145.1_11861_3_64	-	2842STDY5644291
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70032	52.1	-	MZON01	41	4801	4563	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073981	GCA_002038065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/065/GCA_002038065.1_ASM203806v1	28705959	CFSAN057640
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.86134	32.7	-	CSOZ01	76	2985	2831	3/22/15	3/4/17	Scaffold	SC	SAMEA1708805	GCA_001201035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/035/GCA_001201035.1_8987_2_12	-	BSAR724
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.74905	32.6	-	CSFV01	42	2863	2766	3/22/15	3/4/17	Scaffold	SC	SAMEA1710085	GCA_001201535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/535/GCA_001201535.1_9235_1_10	-	FL385
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.64006	52.1	-	MZOT01	32	4721	4485	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073975	GCA_002038105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/105/GCA_002038105.1_ASM203810v1	28705959	CFSAN057646
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1159	39.6	-	FCYD01	52	2334	2076	2/6/16	3/13/17	Scaffold	SC	SAMEA2238973	GCA_900037155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/155/GCA_900037155.1_11861_4_25	-	2842STDY5644349
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.08714	50.6	-	NHZL01	12	5118	4782	5/31/17	6/2/17	Scaffold	Broad Institute	SAMN04521913	GCA_002163195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/195/GCA_002163195.1_ASM216319v1	-	MGH164
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.07269	50.6	-	NHZJ01	9	5203	4875	5/31/17	6/2/17	Scaffold	Broad Institute	SAMN04521848	GCA_002163275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/275/GCA_002163275.1_ASM216327v1	-	BIDMC116
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04886	39.6	-	FDDP01	28	2251	2014	2/6/16	3/5/17	Scaffold	SC	SAMEA2382704	GCA_900037165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/165/GCA_900037165.1_12673_7_64	-	2842STDY5753245
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69839	52.1	-	MZOW01	45	4801	4563	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073972	GCA_002038115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/115/GCA_002038115.1_ASM203811v1	28705959	CFSAN057649
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88016	32.6	-	CSDX01	59	3028	2896	3/23/15	3/4/17	Scaffold	SC	SAMEA1710088	GCA_001201615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/201/615/GCA_001201615.1_9266_1_16	-	FL370
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88527	32.6	-	CSHJ01	30	3026	2898	3/22/15	3/4/17	Scaffold	SC	SAMEA1710084	GCA_001202595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/595/GCA_001202595.1_9266_1_2	-	FL356
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70036	52.1	-	MZOX01	36	4795	4568	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073971	GCA_002038135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/135/GCA_002038135.1_ASM203813v1	28705959	CFSAN057650
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99137	39.7	-	FDDT01	35	2191	1985	2/6/16	3/13/17	Scaffold	SC	SAMEA2382708	GCA_900037175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/175/GCA_900037175.1_12673_7_68	-	2842STDY5753249
Escherichia coli	562	PRJNA271899	271899	Proteobacteria	Gammaproteobacteria	5.54968	50.8	-	NHZK01	19	5607	5175	5/31/17	6/2/17	Scaffold	Broad Institute	SAMN04521880	GCA_002163295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/163/295/GCA_002163295.1_ASM216329v1	-	MGH129
Escherichia coli	562	PRJNA361335	361335	Proteobacteria	Gammaproteobacteria	5.28606	50.6	-	NGUW01	213	5571	5144	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06231252	GCA_002164595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/595/GCA_002164595.1_ASM216459v1	-	WCHEC1837
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99492	39.8	-	FDFP01	46	2189	1936	2/6/16	3/13/17	Scaffold	SC	SAMEA2382757	GCA_900037185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/185/GCA_900037185.1_12718_4_22	-	2842STDY5753299
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69832	52.1	-	MZPA01	34	4803	4566	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073968	GCA_002038155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/155/GCA_002038155.1_ASM203815v1	28705959	CFSAN057653
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.78405	32.7	-	CSAX01	34	2852	2710	3/22/15	3/4/17	Scaffold	SC	SAMEA1033436	GCA_001203975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/975/GCA_001203975.1_7092_7_81	-	BSAR57
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.84716	32.6	-	CSCA01	18	2986	2852	3/22/15	3/4/17	Scaffold	SC	SAMEA1710087	GCA_001204955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/204/955/GCA_001204955.1_9266_1_17	-	FL371
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.67014	52.1	-	MZPE01	33	4775	4537	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073964	GCA_002038185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/185/GCA_002038185.1_ASM203818v1	28705959	CFSAN057657
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10991	39.6	-	FDHI01	42	2303	2054	2/6/16	3/13/17	Scaffold	SC	SAMEA2382802	GCA_900037195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/195/GCA_900037195.1_12718_4_67	-	2842STDY5753344
Escherichia coli	562	PRJNA361335	361335	Proteobacteria	Gammaproteobacteria	5.24482	50.6	-	NGUU01	207	5533	5104	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06909153	GCA_002164635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/635/GCA_002164635.1_ASM216463v1	-	WCHEC96200
Escherichia coli	562	PRJNA361335	361335	Proteobacteria	Gammaproteobacteria	5.29282	50.6	-	NGUV01	211	5589	5134	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06909152	GCA_002164645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/645/GCA_002164645.1_ASM216464v1	-	WCHEC4533
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1185	39.5	-	FDKP01	62	2339	2081	2/6/16	3/13/17	Scaffold	SC	SAMEA2382894	GCA_900037205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/205/GCA_900037205.1_12718_5_64	-	2842STDY5753437
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69972	52.1	-	MZPG01	40	4800	4562	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073962	GCA_002038205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/205/GCA_002038205.1_ASM203820v1	28705959	CFSAN057659
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.86036	32.7	-	CSFU01	20	2995	2872	3/23/15	3/4/17	Scaffold	SC	SAMEA1710076	GCA_001205315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/315/GCA_001205315.1_9266_1_12	-	FL366
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87122	32.6	-	CSCU01	49	3023	2904	3/22/15	3/4/17	Scaffold	SC	SAMEA1710105	GCA_001206395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/395/GCA_001206395.1_9235_1_18	-	FL393
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70267	52.1	-	MZPB01	40	4800	4566	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073967	GCA_002038215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/215/GCA_002038215.1_ASM203821v1	28705959	CFSAN057654
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98317	39.7	-	FDLM01	20	2200	1972	2/6/16	3/13/17	Scaffold	SC	SAMEA2382917	GCA_900037215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/215/GCA_900037215.1_12718_5_87	-	2842STDY5753460
Escherichia coli	562	PRJNA385738	385738	Proteobacteria	Gammaproteobacteria	4.89077	50.5	-	NGVD01	114	5159	4790	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06909180	GCA_002164865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/865/GCA_002164865.1_ASM216486v1	-	WCHEC32
Escherichia coli	562	PRJNA385738	385738	Proteobacteria	Gammaproteobacteria	5.55502	50.3	-	NGVA01	282	5997	5547	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06909183	GCA_002164915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/915/GCA_002164915.1_ASM216491v1	-	WCHEC68
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05903	39.5	-	FDML01	40	2273	2037	2/6/16	3/12/17	Scaffold	SC	SAMEA2382945	GCA_900037225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/225/GCA_900037225.1_12754_1_20	-	2842STDY5753489
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69943	52.1	-	MZPD01	39	4805	4567	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073965	GCA_002038225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/225/GCA_002038225.1_ASM203822v1	28705959	CFSAN057656
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.91968	32.6	-	CSCK01	72	3099	2975	3/22/15	3/4/17	Scaffold	SC	SAMEA1710101	GCA_001207535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/535/GCA_001207535.1_9235_1_14	-	FL389
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.90771	32.7	-	CSCB01	20	3053	2918	3/22/15	3/5/17	Scaffold	SC	SAMEA1324762	GCA_001208805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/805/GCA_001208805.1_9669_1_4	-	USFL298
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70087	52.1	-	MZPF01	38	4807	4563	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073963	GCA_002038255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/255/GCA_002038255.1_ASM203825v1	28705959	CFSAN057658
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06043	39.6	-	FDTL01	40	2255	2000	2/9/16	3/13/17	Scaffold	SC	SAMEA2239222	GCA_900037415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/415/GCA_900037415.1_11860_8_90	-	2842STDY5644604
Escherichia coli	562	PRJNA385738	385738	Proteobacteria	Gammaproteobacteria	4.90964	50.4	-	NGVE01	75	4968	4680	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06909179	GCA_002164935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/935/GCA_002164935.1_ASM216493v1	-	WCHEC28
Escherichia coli	562	PRJNA385738	385738	Proteobacteria	Gammaproteobacteria	5.39928	50.3	-	NGVH01	171	5700	5297	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06909176	GCA_002164955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/955/GCA_002164955.1_ASM216495v1	-	WCHEC16
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06291	39.6	-	FDVM01	20	2279	2042	2/9/16	3/13/17	Scaffold	SC	SAMEA2238281	GCA_900037425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/425/GCA_900037425.1_11860_4_5	-	2842STDY5643650
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69669	52.1	-	MZPH01	34	4789	4554	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073961	GCA_002038285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/285/GCA_002038285.1_ASM203828v1	28705959	CFSAN057660
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.85554	32.7	-	CSSL01	70	2991	2823	3/23/15	3/4/17	Scaffold	SC	SAMEA1708872	GCA_001209785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/785/GCA_001209785.1_8987_2_20	-	BSAR725
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88084	32.6	-	CSCC01	32	3036	2906	3/22/15	3/4/17	Scaffold	SC	SAMEA1710078	GCA_001210685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/685/GCA_001210685.1_9266_1_5	-	FL359
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.64164	52.1	-	MZPL01	29	4722	4469	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073957	GCA_002038305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/305/GCA_002038305.1_ASM203830v1	28705959	CFSAN057664
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.18146	39.5	-	FCSY01	34	2436	2172	2/6/16	3/6/17	Scaffold	SC	SAMEA2239101	GCA_900037435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/435/GCA_900037435.1_11860_7_62	-	2842STDY5644482
Escherichia coli	562	PRJNA385738	385738	Proteobacteria	Gammaproteobacteria	4.84373	50.5	-	NGVF01	123	5070	4687	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06909178	GCA_002164975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/975/GCA_002164975.1_ASM216497v1	-	WCHEC26
Escherichia coli	562	PRJNA385738	385738	Proteobacteria	Gammaproteobacteria	4.92903	50.9	-	NGVI01	130	5123	4759	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06909175	GCA_002164985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/164/985/GCA_002164985.1_ASM216498v1	-	WCHEC7
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10452	39.6	-	FCWR01	31	2313	2055	2/6/16	3/13/17	Scaffold	SC	SAMEA2238929	GCA_900037445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/445/GCA_900037445.1_11861_3_77	-	2842STDY5644304
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70054	52.1	-	MZPJ01	35	4804	4559	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073959	GCA_002038325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/325/GCA_002038325.1_ASM203832v1	28705959	CFSAN057662
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.87174	32.6	-	CSIU01	52	3016	2890	3/23/15	3/4/17	Scaffold	SC	SAMEA1710094	GCA_001210725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/210/725/GCA_001210725.1_9235_1_8	-	FL383
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.83733	32.7	-	CSQW01	59	2953	2793	3/23/15	3/4/17	Scaffold	SC	SAMEA1463427	GCA_001211025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/025/GCA_001211025.1_7907_7_58	-	BSAR161_2
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70041	52.1	-	MZPK01	36	4811	4549	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073958	GCA_002038345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/345/GCA_002038345.1_ASM203834v1	28705959	CFSAN057663
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07988	39.6	-	FCXR01	34	2311	2062	2/6/16	3/13/17	Scaffold	SC	SAMEA2382588	GCA_900037455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/455/GCA_900037455.1_12673_6_43	-	2842STDY5753128
Escherichia coli	562	PRJNA385738	385738	Proteobacteria	Gammaproteobacteria	4.91136	50.7	-	NGVJ01	122	5191	4824	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06909174	GCA_002165005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/005/GCA_002165005.1_ASM216500v1	-	WCHEC5
Escherichia coli	562	PRJNA385738	385738	Proteobacteria	Gammaproteobacteria	5.23367	50.4	-	NGVK01	190	5486	5134	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06909173	GCA_002165035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/035/GCA_002165035.1_ASM216503v1	-	WCHEC4
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0898	39.6	-	FDIO01	21	2303	2068	2/6/16	3/6/17	Scaffold	SC	SAMEA2382836	GCA_900037465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/465/GCA_900037465.1_12718_5_6	-	2842STDY5753379
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.62824	52.2	-	MZPM01	37	4729	4492	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073956	GCA_002038365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/365/GCA_002038365.1_ASM203836v1	28705959	CFSAN057665
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92384	32.6	-	CSEF01	24	3091	2954	3/23/15	3/5/17	Scaffold	SC	SAMEA1710113	GCA_001211065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/065/GCA_001211065.1_9266_1_10	-	FL364
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.91385	32.7	-	CSCX01	24	3063	2915	3/23/15	3/4/17	Scaffold	SC	SAMEA1324585	GCA_001211625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/625/GCA_001211625.1_9669_1_1	-	USFL016
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69975	52.1	-	MZPP01	33	4811	4571	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074013	GCA_002038385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/385/GCA_002038385.1_ASM203838v1	28705959	CFSAN057668
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.016	39.8	-	FDMM01	22	2260	2022	2/6/16	3/13/17	Scaffold	SC	SAMEA2382946	GCA_900037475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/475/GCA_900037475.1_12754_1_21	-	2842STDY5753490
Escherichia coli	562	PRJNA385738	385738	Proteobacteria	Gammaproteobacteria	4.98291	50.5	-	NGVB01	129	5212	4903	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06909182	GCA_002165045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/045/GCA_002165045.1_ASM216504v1	-	WCHEC66
Escherichia coli	562	PRJNA385738	385738	Proteobacteria	Gammaproteobacteria	4.99217	50.7	-	NGVC01	143	5250	4866	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06909181	GCA_002165055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/055/GCA_002165055.1_ASM216505v1	-	WCHEC33
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98684	39.7	-	FDOU01	22	2173	1958	2/6/16	3/13/17	Scaffold	SC	SAMEA2383009	GCA_900037485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/485/GCA_900037485.1_12754_1_84	-	2842STDY5753553
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69894	52.1	-	MZPR01	34	4801	4562	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074011	GCA_002038395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/395/GCA_002038395.1_ASM203839v1	28705959	CFSAN057670
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.86347	32.6	-	CSFA01	57	3031	2883	3/22/15	3/4/17	Scaffold	SC	SAMEA1710099	GCA_001212385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/385/GCA_001212385.1_9235_1_2	-	FL377
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92372	32.6	-	CSHB01	29	3121	2959	3/22/15	3/4/17	Scaffold	SC	SAMEA1710080	GCA_001212665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/212/665/GCA_001212665.1_9266_1_6	-	FL360
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70153	52.1	-	MZPO01	38	4808	4562	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074014	GCA_002038425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/425/GCA_002038425.1_ASM203842v1	28705959	CFSAN057667
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09043	39.6	-	FEKY01	18	2314	2079	2/9/16	3/5/17	Scaffold	SC	SAMEA2383184	GCA_900037495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/495/GCA_900037495.1_12754_3_69	-	2842STDY5753730
Escherichia coli	562	PRJNA385738	385738	Proteobacteria	Gammaproteobacteria	5.22945	50.6	-	NGVG01	186	5540	5128	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06909177	GCA_002165095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/095/GCA_002165095.1_ASM216509v1	-	WCHEC22
Escherichia coli	562	PRJNA385738	385738	Proteobacteria	Gammaproteobacteria	4.99665	50.5	-	NGVL01	182	5211	4817	6/2/17	6/5/17	Scaffold	"West China Hospital, Sichuan University"	SAMN06909172	GCA_002165115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/115/GCA_002165115.1_ASM216511v1	-	WCHEC1
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99306	39.8	-	FFSE01	40	2194	1930	2/10/16	3/13/17	Scaffold	SC	SAMEA2203813	GCA_900037615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/615/GCA_900037615.1_11511_8_15	-	2245STDY5608952
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69689	52.1	-	MZPT01	48	4802	4542	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074009	GCA_002038445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/445/GCA_002038445.1_ASM203844v1	28705959	CFSAN057672
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.90298	32.6	-	CTYM01	76	3038	2912	3/31/15	3/4/17	Scaffold	SC	SAMEA862577	GCA_001223565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/565/GCA_001223565.1_5364_1_2	-	DEU2
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.73215	32.7	-	CTUN01	61	2833	2678	3/31/15	4/21/17	Scaffold	SC	SAMEA734789	GCA_001223625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/625/GCA_001223625.1_4395_5_9	-	07-01492
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70158	52.1	-	MZPV01	33	4804	4571	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074007	GCA_002038455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/455/GCA_002038455.1_ASM203845v1	28705959	CFSAN057674
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.13938	39.6	-	FFTJ01	52	2376	2113	2/10/16	3/12/17	Scaffold	SC	SAMEA2203851	GCA_900037625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/625/GCA_900037625.1_11511_8_22	-	2245STDY5608991
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.84855	50.7	-	NIDQ01	360	5060	4725	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856376	GCA_002165915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/915/GCA_002165915.1_ASM216591v1	-	11.3r
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.84403	50.7	-	NIDO01	206	5048	4730	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856374	GCA_002165925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/925/GCA_002165925.1_ASM216592v1	-	11.1a
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.03371	39.6	-	FCSX01	50	2234	1999	2/6/16	3/13/17	Scaffold	SC	SAMEA2239100	GCA_900038005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/005/GCA_900038005.1_11860_7_61	-	2842STDY5644481
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69936	52.1	-	MZPZ01	29	4805	4564	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074003	GCA_002038485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/485/GCA_002038485.1_ASM203848v1	28705959	CFSAN057678
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.7778	32.6	-	CTUJ01	37	2845	2716	3/31/15	3/4/17	Scaffold	SC	SAMEA734692	GCA_001223645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/645/GCA_001223645.1_4395_5_2	-	07-01744
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.76529	32.6	-	CTVJ01	47	2813	2696	3/31/15	3/4/17	Scaffold	SC	SAMEA734713	GCA_001223665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/665/GCA_001223665.1_4395_7_4	-	06-01552
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.6983	52.1	-	MZQB01	31	4793	4560	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074001	GCA_002038505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/505/GCA_002038505.1_ASM203850v1	28705959	CFSAN057680
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12591	39.6	-	FCSW01	50	2333	2073	2/6/16	3/13/17	Scaffold	SC	SAMEA2239099	GCA_900038015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/015/GCA_900038015.1_11860_7_60	-	2842STDY5644480
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.99095	50.7	-	NIDR01	219	5175	4861	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856377	GCA_002165955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/955/GCA_002165955.1_ASM216595v1	-	12.1a
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.85639	50.7	-	NIDP01	303	5072	4747	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856375	GCA_002165965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/965/GCA_002165965.1_ASM216596v1	-	11.2p
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.03592	39.7	-	FCZP01	26	2264	2010	2/6/16	3/12/17	Scaffold	SC	SAMEA2674670	GCA_900038025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/025/GCA_900038025.1_14412_3_47	-	2842STDY5881930
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70115	52.1	-	MZPX01	32	4804	4564	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074005	GCA_002038525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/525/GCA_002038525.1_ASM203852v1	28705959	CFSAN057676
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.75376	32.7	-	CTVU01	50	2838	2681	3/31/15	3/4/17	Scaffold	SC	SAMEA734752	GCA_001223705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/705/GCA_001223705.1_4395_8_12	-	03-00220
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.75281	32.7	-	CUAW01	34	2841	2678	3/31/15	4/21/17	Scaffold	SC	SAMEA1030182	GCA_001223865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/865/GCA_001223865.1_6401_7_16	-	HO 5378 0592 11
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70971	52.1	-	MZQE01	37	4829	4585	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073998	GCA_002038545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/545/GCA_002038545.1_ASM203854v1	28705959	CFSAN057683
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.21729	39.6	-	FFSZ01	217	2474	2162	2/10/16	3/13/17	Scaffold	SC	SAMEA2203838	GCA_900038105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/105/GCA_900038105.1_11657_4_19	-	2245STDY5608977
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.99311	50.7	-	NIDU01	266	5177	4850	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856380	GCA_002165995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/165/995/GCA_002165995.1_ASM216599v1	-	12.4r
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.98423	50.7	-	NIDS01	672	5190	4821	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856378	GCA_002166005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/005/GCA_002166005.1_ASM216600v1	-	12.2p
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.16359	39.6	-	FFTA01	180	2341	2101	2/10/16	3/5/17	Scaffold	SC	SAMEA2203839	GCA_900038115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/115/GCA_900038115.1_11658_2_90	-	2245STDY5608978
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69793	52.1	-	MZPY01	33	4815	4560	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074004	GCA_002038555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/555/GCA_002038555.1_ASM203855v1	28705959	CFSAN057677
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.69853	32.9	-	CTTX01	99	2741	2534	3/31/15	4/21/17	Scaffold	SC	SAMEA734747	GCA_001223965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/223/965/GCA_001223965.1_4351_7_8	-	07-03347
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.76413	32.7	-	CTUG01	39	2863	2719	3/31/15	3/4/17	Scaffold	SC	SAMEA734786	GCA_001224045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/045/GCA_001224045.1_4351_8_5	-	07-02992
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70307	52.1	-	MZQH01	41	4808	4569	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073995	GCA_002038585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/585/GCA_002038585.1_ASM203858v1	28705959	CFSAN057686
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.02896	39.8	-	FFTL01	44	2231	1995	2/10/16	3/5/17	Scaffold	SC	SAMEA2203854	GCA_900038125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/125/GCA_900038125.1_11679_1_28	-	2245STDY5608994
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.16661	50.4	-	NIDV01	226	5371	4981	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856381	GCA_002166025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/025/GCA_002166025.1_ASM216602v1	-	17.1a
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.99175	50.7	-	NIDT01	231	5178	4857	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856379	GCA_002166035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/035/GCA_002166035.1_ASM216603v1	-	12.3r
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06126	39.6	-	FFUB01	20	2269	2036	2/10/16	3/6/17	Scaffold	SC	SAMEA2203872	GCA_900038135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/135/GCA_900038135.1_11657_4_29	-	2245STDY5609012
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69864	52.1	-	MZQL01	34	4799	4560	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073991	GCA_002038605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/605/GCA_002038605.1_ASM203860v1	28705959	CFSAN057690
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.7219	32.7	-	CUCC01	31	2794	2650	3/31/15	3/4/17	Scaffold	SC	SAMEA1030156	GCA_001224085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/085/GCA_001224085.1_6437_8_3	-	1998/B23
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.80197	32.6	-	CTSC01	48	2876	2762	3/31/15	3/4/17	Scaffold	SC	SAMEA734724	GCA_001224165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/165/GCA_001224165.1_4351_3_5	-	08-01668
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.72885	52.1	-	MZQD01	41	4842	4607	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073999	GCA_002038625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/625/GCA_002038625.1_ASM203862v1	28705959	CFSAN057682
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0769	39.7	-	FFUC01	36	2302	2056	2/10/16	3/13/17	Scaffold	SC	SAMEA2203873	GCA_900038145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/145/GCA_900038145.1_11657_4_30	-	2245STDY5609013
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.98491	50.5	-	NIDY01	173	5081	4751	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856384	GCA_002166075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/075/GCA_002166075.1_ASM216607v1	-	20.1a
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.16164	50.4	-	NIDW01	223	5363	4970	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856382	GCA_002166095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/095/GCA_002166095.1_ASM216609v1	-	17.2p
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.03072	39.8	-	FFUK01	40	2224	1997	2/10/16	3/13/17	Scaffold	SC	SAMEA2203880	GCA_900038155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/155/GCA_900038155.1_11893_8_15	-	2245STDY5609020
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69841	52.1	-	MZQM01	35	4804	4560	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073990	GCA_002038645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/645/GCA_002038645.1_ASM203864v1	28705959	CFSAN057691
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.6992	32.9	-	CTTN01	70	2736	2560	3/31/15	4/21/17	Scaffold	SC	SAMEA734768	GCA_001224285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/285/GCA_001224285.1_4351_7_11	-	07-03168
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.8006	32.7	-	CTVD01	62	2920	2766	3/31/15	3/4/17	Scaffold	SC	SAMEA734719	GCA_001224525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/525/GCA_001224525.1_4395_7_10	-	06-00896
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69834	52.1	-	MZQJ01	42	4800	4571	3/20/17	7/26/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073993	GCA_002038665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/665/GCA_002038665.1_ASM203866v1	-	CFSAN057688
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.14727	39.6	-	FFUN01	179	2360	2076	2/10/16	3/13/17	Scaffold	SC	SAMEA2203883	GCA_900038165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/165/GCA_900038165.1_11679_1_32	-	2245STDY5609023
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.97708	50.5	-	NIEA01	245	5072	4748	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856386	GCA_002166115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/115/GCA_002166115.1_ASM216611v1	-	20.3r
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.15359	50.4	-	NIDX01	196	5346	4973	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856383	GCA_002166125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/125/GCA_002166125.1_ASM216612v1	-	17.3r
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0714	39.5	-	FFUJ01	60	2298	2051	2/10/16	3/15/17	Scaffold	SC	SAMEA2203882	GCA_900038175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/175/GCA_900038175.1_11511_8_32	-	2245STDY5609022
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.63941	52.1	-	MZQN01	36	4715	4483	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073989	GCA_002038685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/685/GCA_002038685.1_ASM203868v1	28705959	CFSAN057692
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.79794	32.8	-	CTTQ01	89	2881	2701	3/31/15	4/21/17	Scaffold	SC	SAMEA734730	GCA_001224605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/605/GCA_001224605.1_4351_3_1	-	08-01673
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.76978	32.6	-	CTTO01	55	2831	2706	3/31/15	4/21/17	Scaffold	SC	SAMEA734745	GCA_001224685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/685/GCA_001224685.1_4351_7_10	-	07-03348-1
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70582	52.1	-	MZQO01	46	4813	4570	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073988	GCA_002038705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/705/GCA_002038705.1_ASM203870v1	28705959	CFSAN057693
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04991	39.7	-	FFUO01	15	2251	2027	2/10/16	3/13/17	Scaffold	SC	SAMEA2203886	GCA_900038185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/185/GCA_900038185.1_11511_8_34	-	2245STDY5609026
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.98097	50.5	-	NIDZ01	167	5066	4750	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856385	GCA_002166135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/135/GCA_002166135.1_ASM216613v1	-	20.2r
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.99121	50.5	-	NIEB01	195	5125	4788	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856387	GCA_002166175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/175/GCA_002166175.1_ASM216617v1	-	21.1a
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05964	39.5	-	FDXT01	48	2272	2014	2/9/16	3/13/17	Scaffold	SC	SAMEA2238376	GCA_900038605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/605/GCA_900038605.1_11860_5_6	-	2842STDY5643746
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.6991	52.1	-	MZQP01	37	4802	4561	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073987	GCA_002038715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/715/GCA_002038715.1_ASM203871v1	28705959	CFSAN057694
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.79016	32.7	-	CTVA01	109	2886	2733	3/31/15	4/21/17	Scaffold	SC	SAMEA734703	GCA_001224825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/825/GCA_001224825.1_4395_6_6	-	07-00063
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.77269	32.6	-	CTTL01	56	2838	2710	3/31/15	3/4/17	Scaffold	SC	SAMEA734798	GCA_001224925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/925/GCA_001224925.1_4351_5_9	-	08-01481-1
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.6985	52.1	-	MZQU01	36	4798	4566	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074045	GCA_002038745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/745/GCA_002038745.1_ASM203874v1	28705959	CFSAN057699
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06463	39.6	-	FCST01	37	2247	1999	2/6/16	3/6/17	Scaffold	SC	SAMEA2239094	GCA_900038615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/615/GCA_900038615.1_11860_7_55	-	2842STDY5644475
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.99075	50.5	-	NIEC01	186	5122	4797	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856388	GCA_002166185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/185/GCA_002166185.1_ASM216618v1	-	21.2p
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.77276	50.8	-	NIEE01	214	4956	4631	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856390	GCA_002166195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/195/GCA_002166195.1_ASM216619v1	-	2.1a
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07816	39.6	-	FDAI01	30	2279	2035	2/6/16	3/6/17	Scaffold	SC	SAMEA2382619	GCA_900038625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/625/GCA_900038625.1_12673_6_74	-	2842STDY5753159
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70508	52.1	-	MZQX01	34	4813	4572	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074042	GCA_002038765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/765/GCA_002038765.1_ASM203876v1	28705959	CFSAN057702
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.82565	32.7	-	CTVY01	46	2950	2802	3/31/15	3/4/17	Scaffold	SC	SAMEA734749	GCA_001224945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/224/945/GCA_001224945.1_4395_8_5	-	04-00609
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.86849	32.7	-	CTXJ01	297	3039	2846	3/31/15	3/4/17	Scaffold	SC	SAMEA862533	GCA_001225365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/365/GCA_001225365.1_5139_6_6	-	IU19
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70742	52.1	-	MZQR01	46	4811	4576	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074018	GCA_002038785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/785/GCA_002038785.1_ASM203878v1	28705959	CFSAN057696
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.03702	39.7	-	FEHG01	37	2245	2005	2/9/16	3/12/17	Scaffold	SC	SAMEA2383088	GCA_900038665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/665/GCA_900038665.1_12754_2_68	-	2842STDY5753633
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.99438	50.5	-	NIED01	161	5124	4803	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856389	GCA_002166235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/235/GCA_002166235.1_ASM216623v1	-	21.3r
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.20641	50.5	-	NIEI01	891	5464	5006	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856394	GCA_002166255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/255/GCA_002166255.1_ASM216625v1	-	26.3r
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08272	39.6	-	FFTX01	34	2308	2056	2/10/16	3/13/17	Scaffold	SC	SAMEA2203868	GCA_900038685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/685/GCA_900038685.1_11511_8_26	-	2245STDY5609008
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69796	52.1	-	MZQY01	31	4795	4568	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074041	GCA_002038805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/805/GCA_002038805.1_ASM203880v1	28705959	CFSAN057703
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.73306	32.7	-	CTUB01	60	2777	2653	3/31/15	4/21/17	Scaffold	SC	SAMEA734783	GCA_001225505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/505/GCA_001225505.1_4351_8_2	-	07-02989
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.84556	32.7	-	CTUH01	58	2983	2818	3/31/15	4/21/17	Scaffold	SC	SAMEA734689	GCA_001225525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/525/GCA_001225525.1_4395_5_5	-	07-02159
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70143	52.1	-	MZQZ01	35	4799	4569	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074040	GCA_002038825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/825/GCA_002038825.1_ASM203882v1	28705959	CFSAN057704
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.11761	39.7	-	FFUE01	94	2328	2100	2/10/16	3/6/17	Scaffold	SC	SAMEA2203874	GCA_900038695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/695/GCA_900038695.1_11511_8_28	-	2245STDY5609014
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.04964	50.5	-	NIEF01	556	5277	4931	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856391	GCA_002166265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/265/GCA_002166265.1_ASM216626v1	-	2.2r
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.20911	50.5	-	NIEG01	192	5437	5049	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856392	GCA_002166275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/275/GCA_002166275.1_ASM216627v1	-	26.1a
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.12192	39.6	-	FFUP01	65	2359	2096	2/10/16	3/5/17	Scaffold	SC	SAMEA2203887	GCA_900038705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/705/GCA_900038705.1_11511_8_35	-	2245STDY5609027
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69684	52.1	-	MZRA01	37	4784	4555	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074039	GCA_002038835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/835/GCA_002038835.1_ASM203883v1	28705959	CFSAN057705
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.72274	32.7	-	CTVP01	42	2820	2677	3/31/15	3/4/17	Scaffold	SC	SAMEA734721	GCA_001225545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/545/GCA_001225545.1_4395_8_10	-	09-00683
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.81466	33	-	CTTC01	89	2885	2630	3/31/15	4/21/17	Scaffold	SC	SAMEA734774	GCA_001225585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/585/GCA_001225585.1_4351_5_2	-	08-01483
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70324	52.1	-	MZRG01	35	4811	4573	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074033	GCA_002038865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/865/GCA_002038865.1_ASM203886v1	28705959	CFSAN057711
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99118	39.8	-	FDTN01	50	2180	1927	2/9/16	3/13/17	Scaffold	SC	SAMEA2239225	GCA_900039265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/265/GCA_900039265.1_11860_8_93	-	2842STDY5644608
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.20731	50.5	-	NIEH01	209	5433	5039	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856393	GCA_002166285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/285/GCA_002166285.1_ASM216628v1	-	26.2p
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.00026	50.7	-	NIEL01	1484	5365	4848	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856397	GCA_002166335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/335/GCA_002166335.1_ASM216633v1	-	31.3r
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08595	39.7	-	FDXU01	65	2322	2075	2/9/16	3/6/17	Scaffold	SC	SAMEA2238379	GCA_900039275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/275/GCA_900039275.1_11860_5_10	-	2842STDY5643749
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73152	52.1	-	MZRH01	30	4834	4593	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074032	GCA_002038885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/885/GCA_002038885.1_ASM203888v1	28705959	CFSAN057712
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.74193	32.7	-	CUBO01	35	2813	2675	3/31/15	3/4/17	Scaffold	SC	SAMEA1030281	GCA_001225625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/625/GCA_001225625.1_6437_8_12	-	H65
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.86905	32.7	-	CUAB01	35	3019	2845	3/31/15	4/21/17	Scaffold	SC	SAMEA1030187	GCA_001225705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/705/GCA_001225705.1_6401_6_4	-	H431 62
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69831	52.1	-	MZRB01	34	4797	4565	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074038	GCA_002038905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/905/GCA_002038905.1_ASM203890v1	28705959	CFSAN057706
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00229	39.7	-	FDHZ01	32	2172	1965	2/6/16	3/13/17	Scaffold	SC	SAMEA2382819	GCA_900039315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/315/GCA_900039315.1_12718_4_84	-	2842STDY5753361
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.14595	50.6	-	NIEM01	145	5389	5043	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856398	GCA_002166345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/345/GCA_002166345.1_ASM216634v1	-	34.1a
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.67872	50.9	-	NIEK01	123	4820	4557	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856396	GCA_002166375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/375/GCA_002166375.1_ASM216637v1	-	31.2p
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07072	39.6	-	FDWB01	28	2282	2049	2/9/16	3/13/17	Scaffold	SC	SAMEA2238302	GCA_900039325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/325/GCA_900039325.1_11860_4_27	-	2842STDY5643671
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.64011	52.1	-	MZRL01	33	4712	4484	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074028	GCA_002038915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/915/GCA_002038915.1_ASM203891v1	28705959	CFSAN057716
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.85306	32.7	-	CTWE01	81	2990	2847	3/31/15	3/4/17	Scaffold	SC	SAMEA862647	GCA_001225725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/725/GCA_001225725.1_5083_7_1	-	IU1
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.86865	32.7	-	CTYS01	69	3008	2868	3/31/15	3/4/17	Scaffold	SC	SAMEA862541	GCA_001225825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/825/GCA_001225825.1_5364_2_10	-	DEU23
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69975	52.1	-	MZRE01	33	4805	4568	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074035	GCA_002038945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/945/GCA_002038945.1_ASM203894v1	28705959	CFSAN057709
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05047	39.6	-	FEDW01	28	2245	2009	2/9/16	3/13/17	Scaffold	SC	SAMEA2238657	GCA_900039335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/335/GCA_900039335.1_11861_1_91	-	2842STDY5644030
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.14461	50.6	-	NIEN01	151	5375	5040	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856399	GCA_002166405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/405/GCA_002166405.1_ASM216640v1	-	34.2r
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.13784	50.5	-	NIEO01	214	5324	4946	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856400	GCA_002166415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/415/GCA_002166415.1_ASM216641v1	-	35.1a
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06128	39.5	-	FEGW01	23	2263	2045	2/9/16	3/12/17	Scaffold	SC	SAMEA2383078	GCA_900039365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/365/GCA_900039365.1_12754_2_58	-	2842STDY5753623
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69822	52.1	-	MZRO01	36	4806	4562	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074025	GCA_002038965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/965/GCA_002038965.1_ASM203896v1	28705959	CFSAN057719
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.79977	32.7	-	CTUX01	39	2896	2750	3/31/15	4/21/17	Scaffold	SC	SAMEA734698	GCA_001225865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/865/GCA_001225865.1_4395_6_5	-	07-00062
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.82141	32.7	-	CTUQ01	38	2917	2776	3/31/15	4/21/17	Scaffold	SC	SAMEA734690	GCA_001225945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/945/GCA_001225945.1_4395_5_4	-	07-02088
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70011	52.1	-	MZRM01	34	4798	4566	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074027	GCA_002038975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/038/975/GCA_002038975.1_ASM203897v1	28705959	CFSAN057717
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00022	39.6	-	FEHB01	21	2198	1979	2/9/16	3/5/17	Scaffold	SC	SAMEA2383083	GCA_900039375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/375/GCA_900039375.1_12754_2_63	-	2842STDY5753628
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.13573	50.5	-	NIEP01	155	5304	4951	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856401	GCA_002166455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/455/GCA_002166455.1_ASM216645v1	-	35.2p
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.04369	50.4	-	NIER01	176	5237	4866	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856403	GCA_002166465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/465/GCA_002166465.1_ASM216646v1	-	41.1a
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07739	39.6	-	FEMD01	57	2313	2060	2/9/16	3/13/17	Scaffold	SC	SAMEA2383216	GCA_900039385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/385/GCA_900039385.1_12754_4_6	-	2842STDY5753763
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74784	52.1	-	MZRP01	36	4869	4619	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074024	GCA_002039005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/005/GCA_002039005.1_ASM203900v1	28705959	CFSAN057720
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.8173	32.6	-	CTTK01	46	2905	2773	3/31/15	3/4/17	Scaffold	SC	SAMEA734778	GCA_001225965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/965/GCA_001225965.1_4351_6_9	-	07-03350
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.7821	32.7	-	CTVE01	42	2881	2737	3/31/15	3/4/17	Scaffold	SC	SAMEA734702	GCA_001226125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/125/GCA_001226125.1_4395_6_9	-	06-02751
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.78497	52.1	-	MZRV01	34	4916	4667	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074077	GCA_002039025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/025/GCA_002039025.1_ASM203902v1	28705959	CFSAN057726
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00312	39.7	-	FEMM01	45	2215	1986	2/9/16	3/13/17	Scaffold	SC	SAMEA2383226	GCA_900039395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/395/GCA_900039395.1_12754_4_16	-	2842STDY5753773
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.13042	50.5	-	NIEQ01	949	5378	4932	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856402	GCA_002166495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/495/GCA_002166495.1_ASM216649v1	-	35.3r
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.05443	50.4	-	NIES01	165	5258	4874	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856404	GCA_002166505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/505/GCA_002166505.1_ASM216650v1	-	41.2p
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11255	39.7	-	FEKP01	53	2302	2083	2/9/16	3/13/17	Scaffold	SC	SAMEA2383175	GCA_900039405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/405/GCA_900039405.1_12754_3_60	-	2842STDY5753721
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.64082	52.1	-	MZRW01	30	4724	4488	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074076	GCA_002039045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/045/GCA_002039045.1_ASM203904v1	28705959	CFSAN057727
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.80226	32.9	-	CTTH01	87	2865	2667	3/31/15	4/21/17	Scaffold	SC	SAMEA734776	GCA_001226165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/165/GCA_001226165.1_4351_6_1	-	08-01480
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.80567	32.9	-	CTSU01	78	2860	2652	3/31/15	4/21/17	Scaffold	SC	SAMEA734750	GCA_001226205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/205/GCA_001226205.1_4351_2_4	-	09-00981
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70001	52.1	-	MZQT01	37	4794	4562	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074016	GCA_002039065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/065/GCA_002039065.1_ASM203906v1	28705959	CFSAN057698
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09261	39.7	-	FCYM01	41	2298	2052	2/6/16	3/13/17	Scaffold	SC	SAMEA2238989	GCA_900039555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/555/GCA_900039555.1_11861_4_42	-	2842STDY5644365
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.05241	50.4	-	NIET01	766	5319	4851	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856405	GCA_002166525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/525/GCA_002166525.1_ASM216652v1	-	41.3r
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.78062	50.7	-	NIEU01	163	4995	4621	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856406	GCA_002166535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/535/GCA_002166535.1_ASM216653v1	-	41.4p
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05554	39.6	-	FDDV01	35	2239	1985	2/6/16	3/6/17	Scaffold	SC	SAMEA2382710	GCA_900039565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/565/GCA_900039565.1_12673_7_70	-	2842STDY5753251
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.68264	52.1	-	MZRX01	37	4792	4545	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074075	GCA_002039085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/085/GCA_002039085.1_ASM203908v1	28705959	CFSAN057728
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.74856	32.7	-	CTRV01	51	2831	2715	3/31/15	3/4/17	Scaffold	SC	SAMEA734772	GCA_001226305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/305/GCA_001226305.1_4351_5_4	-	08-01485
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.793	32.7	-	CTVN01	52	2872	2747	3/31/15	4/21/17	Scaffold	SC	SAMEA734717	GCA_001226365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/365/GCA_001226365.1_4395_7_8	-	06-01900
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70039	52.1	-	MZRY01	29	4807	4565	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074074	GCA_002039105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/105/GCA_002039105.1_ASM203910v1	28705959	CFSAN057729
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08656	39.6	-	FFRQ01	34	2321	2065	2/9/16	6/9/17	Scaffold	SC	SAMEA2203798	GCA_900039635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/635/GCA_900039635.1_11657_4_9	-	2245STDY5608937
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.78862	50.7	-	NIEV01	332	4997	4624	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856407	GCA_002166565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/565/GCA_002166565.1_ASM216656v1	-	41.5r
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.08268	50.4	-	NIEW01	280	5355	4972	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856408	GCA_002166595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/595/GCA_002166595.1_ASM216659v1	-	5.1a
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08506	39.6	-	FFRS01	29	2326	2059	2/10/16	3/8/17	Scaffold	SC	SAMEA2203799	GCA_900039645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/645/GCA_900039645.1_11679_1_12	-	2245STDY5608938
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69952	52.1	-	MZRS01	30	4800	4562	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074021	GCA_002039125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/125/GCA_002039125.1_ASM203912v1	28705959	CFSAN057723
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.78606	32.7	-	CTRZ01	40	2873	2737	3/31/15	4/21/17	Scaffold	SC	SAMEA734780	GCA_001226445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/445/GCA_001226445.1_4351_6_7	-	08-00602
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.91937	32.7	-	CTZQ01	37	3030	2864	3/31/15	3/4/17	Scaffold	SC	SAMEA1030179	GCA_001226465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/465/GCA_001226465.1_6401_6_16	-	434.07
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.6997	52.1	-	MZSB01	31	4802	4562	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074071	GCA_002039145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/145/GCA_002039145.1_ASM203914v1	28705959	CFSAN057732
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08288	39.7	-	FFTB01	37	2309	2064	2/10/16	3/13/17	Scaffold	SC	SAMEA2203843	GCA_900039655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/655/GCA_900039655.1_11679_1_27	-	2245STDY5608982
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.13947	50.7	-	NIEX01	503	5442	5019	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856409	GCA_002166615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/615/GCA_002166615.1_ASM216661v1	-	5.2p
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.14617	50.6	-	NIEY01	149	5381	5048	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856410	GCA_002166625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/625/GCA_002166625.1_ASM216662v1	-	5.3r
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05182	39.7	-	FDTQ01	16	2272	2046	2/9/16	3/8/17	Scaffold	SC	SAMEA2239228	GCA_900039995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/995/GCA_900039995.1_11860_8_96	-	2842STDY5644611
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69789	52.1	-	MZRZ01	33	4804	4564	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074073	GCA_002039165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/165/GCA_002039165.1_ASM203916v1	28705959	CFSAN057730
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.87502	32.7	-	CTXX01	163	3028	2876	3/31/15	3/4/17	Scaffold	SC	SAMEA862591	GCA_001226505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/505/GCA_001226505.1_5197_1_3	-	RA6
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.79808	32.7	-	CUBV01	32	2889	2747	3/31/15	3/4/17	Scaffold	SC	SAMEA1030213	GCA_001226565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/565/GCA_001226565.1_6437_8_19	-	ARI11
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70111	52.1	-	MZSA01	29	4806	4568	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074072	GCA_002039185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/185/GCA_002039185.1_ASM203918v1	28705959	CFSAN057731
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09471	39.5	-	FCTU01	38	2335	2084	2/6/16	3/13/17	Scaffold	SC	SAMEA2238814	GCA_900040005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/005/GCA_900040005.1_11893_1_57	-	2842STDY5644188
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.83977	50.8	-	NIEZ01	158	5038	4769	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856411	GCA_002166645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/645/GCA_002166645.1_ASM216664v1	-	56.1r
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.41883	50.5	-	NIFC01	1162	5780	5267	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856414	GCA_002166675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/675/GCA_002166675.1_ASM216667v1	-	9.1a
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02161	39.7	-	FCUW01	22	2203	1985	2/6/16	3/13/17	Scaffold	SC	SAMEA2238858	GCA_900040015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/015/GCA_900040015.1_11861_3_3	-	2842STDY5644233
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69719	52.1	-	MZSC01	36	4804	4559	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074070	GCA_002039205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/205/GCA_002039205.1_ASM203920v1	28705959	CFSAN057733
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.79963	32.6	-	CTSI01	57	2887	2757	3/31/15	3/4/17	Scaffold	SC	SAMEA734757	GCA_001226585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/585/GCA_001226585.1_4351_1_11	-	09-01245
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.73262	32.7	-	CTUI01	58	2822	2680	3/31/15	4/21/17	Scaffold	SC	SAMEA734790	GCA_001226605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/605/GCA_001226605.1_4395_5_10	-	07-02901
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.64137	52.1	-	MZSD01	26	4714	4481	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074069	GCA_002039215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/215/GCA_002039215.1_ASM203921v1	28705959	CFSAN057734
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09138	39.7	-	FEFH01	29	2316	2078	2/9/16	3/6/17	Scaffold	SC	SAMEA2238724	GCA_900040025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/025/GCA_900040025.1_11861_2_64	-	2842STDY5644097
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.24706	50.5	-	NIFA01	256	5468	5056	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856412	GCA_002166685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/685/GCA_002166685.1_ASM216668v1	-	56.2r
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	5.26019	50.5	-	NIFB01	247	5482	5060	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856413	GCA_002166705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/705/GCA_002166705.1_ASM216670v1	-	56.3r
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09629	39.5	-	FFTE01	125	2304	2048	2/10/16	3/6/17	Scaffold	SC	SAMEA2203845	GCA_900040065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/065/GCA_900040065.1_11657_4_22	-	2245STDY5608984
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.7053	52.1	-	MZSG01	39	4807	4571	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074066	GCA_002039245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/245/GCA_002039245.1_ASM203924v1	28705959	CFSAN057737
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.70519	32.7	-	CTVL01	38	2767	2622	3/31/15	3/4/17	Scaffold	SC	SAMEA734708	GCA_001226785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/785/GCA_001226785.1_4395_7_2	-	06-01347
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.86951	32.7	-	CTYH01	88	3024	2870	3/31/15	3/4/17	Scaffold	SC	SAMEA862602	GCA_001226865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/865/GCA_001226865.1_5295_1_5	-	MU7
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70105	52.1	-	MZSI01	32	4811	4565	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074064	GCA_002039265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/265/GCA_002039265.1_ASM203926v1	28705959	CFSAN057739
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0761	39.7	-	FCQL01	45	2287	2040	2/6/16	3/5/17	Scaffold	SC	SAMEA2239032	GCA_900040635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/635/GCA_900040635.1_11861_4_86	-	2842STDY5644410
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.67178	50.8	-	NIFD01	115	4751	4509	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856415	GCA_002166715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/715/GCA_002166715.1_ASM216671v1	-	9.2p
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.80152	50.7	-	NIFE01	186	4962	4688	6/5/17	6/7/17	Scaffold	Broad Institute	SAMN06856416	GCA_002166755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/755/GCA_002166755.1_ASM216675v1	-	9.3r
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08705	39.7	-	FDPT01	33	2309	2066	2/9/16	3/13/17	Scaffold	SC	SAMEA2383035	GCA_900040645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/645/GCA_900040645.1_12754_2_15	-	2842STDY5753580
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73256	52	-	MZSM01	41	4855	4609	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074060	GCA_002039285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/285/GCA_002039285.1_ASM203928v1	28705959	CFSAN057743
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.86708	32.7	-	CTWD01	75	3010	2864	3/31/15	3/4/17	Scaffold	SC	SAMEA862658	GCA_001226925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/226/925/GCA_001226925.1_5083_7_11	-	IU12
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.79336	32.7	-	CTTU01	52	2877	2744	3/31/15	3/4/17	Scaffold	SC	SAMEA734767	GCA_001227025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/025/GCA_001227025.1_4351_7_2	-	07-03339
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70104	52.1	-	MZSO01	36	4808	4566	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074058	GCA_002039295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/295/GCA_002039295.1_ASM203929v1	28705959	CFSAN057746
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05934	39.5	-	FEJS01	38	2263	2031	2/9/16	3/13/17	Scaffold	SC	SAMEA2383152	GCA_900040655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/655/GCA_900040655.1_12754_3_37	-	2842STDY5753698
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	4.73326	50.9	-	BDRT01	70	4874	4619	6/7/17	6/28/17	Scaffold	SC	SAMEA1530987	GCA_002206685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/685/GCA_002206685.1_ASM220668v1	-	E621sc
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	5.1103	50.5	-	BDRW01	76	5237	4903	6/7/17	6/28/17	Scaffold	SC	SAMEA1531069	GCA_002206745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/745/GCA_002206745.1_ASM220674v1	-	E2981sc
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.991	39.8	-	FENK01	44	2186	1920	2/9/16	3/8/17	Scaffold	SC	SAMEA2383250	GCA_900040665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/665/GCA_900040665.1_12754_4_40	-	2842STDY5753797
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70388	52.1	-	MZSK01	33	4802	4564	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074062	GCA_002039325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/325/GCA_002039325.1_ASM203932v1	28705959	CFSAN057741
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.8083	32.7	-	CTXO01	79	2921	2788	3/31/15	3/4/17	Scaffold	SC	SAMEA862546	GCA_001227085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/085/GCA_001227085.1_5139_7_4	-	M1229
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.79439	32.7	-	CTTS01	42	2879	2754	3/31/15	3/4/17	Scaffold	SC	SAMEA734746	GCA_001227105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/105/GCA_001227105.1_4351_7_7	-	07-03346
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70167	52.1	-	MZSL01	30	4816	4571	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074061	GCA_002039335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/335/GCA_002039335.1_ASM203933v1	28705959	CFSAN057742
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99159	39.8	-	FFQO01	46	2197	1932	2/9/16	3/13/17	Scaffold	SC	SAMEA2203762	GCA_900040705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/705/GCA_900040705.1_11657_8_5	-	2245STDY5608901
Escherichia coli	562	PRJEB2581	204268	Proteobacteria	Gammaproteobacteria	4.95139	50.6	-	BDOU01	148	5150	4848	6/7/17	6/28/17	Scaffold	SC	SAMEA1031202	GCA_002206765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/765/GCA_002206765.1_ASM220676v1	-	E1657
Escherichia coli	562	PRJEB2581	204268	Proteobacteria	Gammaproteobacteria	5.12153	50.7	-	BDOV01	209	5441	4961	6/7/17	6/28/17	Scaffold	SC	SAMEA1031234	GCA_002206785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/785/GCA_002206785.1_ASM220678v1	-	E636
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.10132	39.6	-	FFQP01	96	2306	2068	2/9/16	3/15/17	Scaffold	SC	SAMEA2203764	GCA_900040715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/715/GCA_900040715.1_11511_8_2	-	2245STDY5608903
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69853	52.1	-	MZOA01	35	4803	4568	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073863	GCA_002039365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/365/GCA_002039365.1_ASM203936v1	28705959	CFSAN057627
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.74158	32.7	-	CTVO01	50	2832	2690	3/31/15	3/4/17	Scaffold	SC	SAMEA734716	GCA_001227145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/145/GCA_001227145.1_4395_7_9	-	05-01089
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.80269	32.7	-	CTRW01	62	2880	2723	3/31/15	3/4/17	Scaffold	SC	SAMEA734729	GCA_001227185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/185/GCA_001227185.1_4351_3_10	-	08-01672
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69934	52.1	-	MZSP01	30	4801	4563	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074057	GCA_002039385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/385/GCA_002039385.1_ASM203938v1	28705959	CFSAN057747
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00296	39.7	-	FDTS01	38	2204	1993	2/9/16	3/5/17	Scaffold	SC	SAMEA2239230	GCA_900041275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/275/GCA_900041275.1_11861_5_2	-	2842STDY5644613
Escherichia coli	562	PRJEB2581	204268	Proteobacteria	Gammaproteobacteria	5.17955	50.7	-	BDOW01	167	5491	5038	6/7/17	6/28/17	Scaffold	SC	SAMEA1031270	GCA_002206805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/805/GCA_002206805.1_ASM220680v1	-	E563
Escherichia coli	562	PRJEB2581	204268	Proteobacteria	Gammaproteobacteria	5.03894	50.6	-	BDOX01	158	5326	4893	6/7/17	6/28/17	Scaffold	SC	SAMEA1031302	GCA_002206825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/825/GCA_002206825.1_ASM220682v1	-	E897
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09639	39.6	-	FEHH01	40	2273	2051	2/9/16	3/13/17	Scaffold	SC	SAMEA2383089	GCA_900041285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/285/GCA_900041285.1_12754_2_69	-	2842STDY5753634
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70058	52.1	-	MZSQ01	33	4801	4567	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074056	GCA_002039395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/395/GCA_002039395.1_ASM203939v1	28705959	CFSAN057748
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.731	32.7	-	CTTB01	52	2776	2658	3/31/15	3/4/17	Scaffold	SC	SAMEA734672	GCA_001227325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/325/GCA_001227325.1_4351_1_7	-	96-01678_H
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.77839	32.8	-	CTSY01	80	2843	2696	3/31/15	4/21/17	Scaffold	SC	SAMEA734771	GCA_001227445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/445/GCA_001227445.1_4351_5_3	-	08-01484
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70435	52.1	-	MZOF01	39	4807	4562	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073805	GCA_002039425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/425/GCA_002039425.1_ASM203942v1	28705959	CFSAN057632
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99208	39.8	-	FDTV01	47	2190	1933	2/9/16	3/13/17	Scaffold	SC	SAMEA2239234	GCA_900041725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/725/GCA_900041725.1_11861_5_6	-	2842STDY5644617
Escherichia coli	562	PRJEB2581	204268	Proteobacteria	Gammaproteobacteria	5.05274	50.6	-	BDOY01	186	5303	4863	6/7/17	6/28/17	Scaffold	SC	SAMEA1031313	GCA_002206845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/845/GCA_002206845.1_ASM220684v1	-	E2348
Escherichia coli	562	PRJEB2581	204268	Proteobacteria	Gammaproteobacteria	5.1396	50.7	-	BDOZ01	155	5435	5041	6/7/17	6/28/17	Scaffold	SC	SAMEA1031327	GCA_002206865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/865/GCA_002206865.1_ASM220686v1	-	E1548
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0795	39.7	-	FCSS01	40	2293	2048	2/6/16	3/6/17	Scaffold	SC	SAMEA2239092	GCA_900041735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/735/GCA_900041735.1_11860_7_53	-	2842STDY5644473
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69808	52.1	-	MZOI01	34	4789	4555	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073780	GCA_002039445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/445/GCA_002039445.1_ASM203944v1	28705959	CFSAN057635
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.79482	32.7	-	CTVZ01	45	2916	2774	3/31/15	3/5/17	Scaffold	SC	SAMEA734726	GCA_001227645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/645/GCA_001227645.1_4395_8_7	-	04-02315-1
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.88929	32.7	-	CUAD01	40	3013	2832	3/31/15	3/4/17	Scaffold	SC	SAMEA1030146	GCA_001227685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/685/GCA_001227685.1_6401_6_19	-	1018.07
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69785	52.1	-	MZOO01	37	4797	4564	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073980	GCA_002039455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/455/GCA_002039455.1_ASM203945v1	28705959	CFSAN057641
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0392	39.7	-	FCUV01	35	2246	2029	2/6/16	3/12/17	Scaffold	SC	SAMEA2238855	GCA_900041745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/745/GCA_900041745.1_12216_4_95	-	2842STDY5644230
Escherichia coli	562	PRJEB2581	204268	Proteobacteria	Gammaproteobacteria	5.16619	50.7	-	BDPA01	166	5478	5029	6/7/17	6/28/17	Scaffold	SC	SAMEA1031334	GCA_002206885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/885/GCA_002206885.1_ASM220688v1	-	E562
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	4.92086	50.5	-	BDPD01	110	5143	4733	6/7/17	6/28/17	Scaffold	SC	SAMEA1317733	GCA_002206925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/925/GCA_002206925.1_ASM220692v1	-	E1526
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08187	39.6	-	FCWT01	38	2271	2034	2/6/16	3/6/17	Scaffold	SC	SAMEA2238934	GCA_900041755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/755/GCA_900041755.1_11861_3_81	-	2842STDY5644309
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.63818	52.1	-	MZOR01	30	4712	4484	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073977	GCA_002039485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/485/GCA_002039485.1_ASM203948v1	28705959	CFSAN057644
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.8021	33.5	-	CTSK01	129	2838	2414	3/31/15	4/21/17	Scaffold	SC	SAMEA734756	GCA_001227725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/725/GCA_001227725.1_4351_2_5	-	09-00982
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.78779	32.7	-	CTSJ01	78	2852	2733	3/31/15	4/21/17	Scaffold	SC	SAMEA734677	GCA_001227885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/885/GCA_001227885.1_4351_1_1	-	98-26821
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70129	52.1	-	MZSS01	34	4807	4567	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074054	GCA_002039505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/505/GCA_002039505.1_ASM203950v1	28705959	CFSAN057750
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.97246	39.7	-	FFQX01	32	2173	1944	2/9/16	3/13/17	Scaffold	SC	SAMEA2203774	GCA_900041765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/765/GCA_900041765.1_11679_1_4	-	2245STDY5608913
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	4.95947	50.8	-	BDPE01	206	5275	4834	6/7/17	6/28/17	Scaffold	SC	SAMEA1317736	GCA_002206945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/945/GCA_002206945.1_ASM220694v1	-	E1594
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	5.02721	50.7	-	BDPF01	162	5307	4891	6/7/17	6/28/17	Scaffold	SC	SAMEA1317737	GCA_002206965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/965/GCA_002206965.1_ASM220696v1	-	E167
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98784	39.7	-	FDTX01	36	2170	1956	2/9/16	3/12/17	Scaffold	SC	SAMEA2239236	GCA_900042345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/345/GCA_900042345.1_11861_5_9	-	2842STDY5644619
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.64178	52.1	-	MZOU01	30	4717	4487	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073974	GCA_002039525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/525/GCA_002039525.1_ASM203952v1	28705959	CFSAN057647
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.7538	32.7	-	CTUS01	39	2854	2681	3/31/15	3/5/17	Scaffold	SC	SAMEA734691	GCA_001227925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/925/GCA_001227925.1_4395_5_3	-	07-01932
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.80223	32.7	-	CTSS01	76	2861	2695	3/31/15	4/21/17	Scaffold	SC	SAMEA734793	GCA_001227965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/965/GCA_001227965.1_4351_3_3	-	08-01666
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70197	52.1	-	MZOP01	34	4806	4567	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073979	GCA_002039545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/545/GCA_002039545.1_ASM203954v1	28705959	CFSAN057642
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.19888	39.5	-	FDTZ01	52	2428	2197	2/9/16	3/13/17	Scaffold	SC	SAMEA2239238	GCA_900042355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/355/GCA_900042355.1_11861_5_11	-	2842STDY5644621
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	4.76478	50.5	-	BDPG01	539	5250	4521	6/7/17	6/28/17	Scaffold	SC	SAMEA1317739	GCA_002206985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/985/GCA_002206985.1_ASM220698v1	-	E354
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	5.27022	50.7	-	BDPJ01	241	5606	5197	6/7/17	6/28/17	Scaffold	SC	SAMEA1317744	GCA_002207045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/045/GCA_002207045.1_ASM220704v1	-	E703
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09749	39.7	-	FCUT01	54	2345	2113	2/6/16	3/13/17	Scaffold	SC	SAMEA2238853	GCA_900042365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/365/GCA_900042365.1_12216_4_93	-	2842STDY5644228
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.63776	52.1	-	MZOQ01	30	4711	4483	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073978	GCA_002039565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/565/GCA_002039565.1_ASM203956v1	28705959	CFSAN057643
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.85829	32.7	-	CTXP01	181	3023	2876	3/31/15	3/4/17	Scaffold	SC	SAMEA862548	GCA_001227985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/985/GCA_001227985.1_5139_7_6	-	M278
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.80861	32.7	-	CUBI01	38	2900	2762	3/31/15	3/4/17	Scaffold	SC	SAMEA1030316	GCA_001228025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/025/GCA_001228025.1_6437_8_1	-	RH 0600 0061 09
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.62953	52.1	-	MZOV01	34	4704	4474	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073973	GCA_002039585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/585/GCA_002039585.1_ASM203958v1	28705959	CFSAN057648
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05896	39.5	-	FCWU01	35	2290	2041	2/6/16	3/13/17	Scaffold	SC	SAMEA2238935	GCA_900042375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/375/GCA_900042375.1_11861_3_82	-	2842STDY5644310
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	4.77801	50.7	-	BDPK01	79	4975	4626	6/7/17	6/28/17	Scaffold	SC	SAMEA1317745	GCA_002207065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/065/GCA_002207065.1_ASM220706v1	-	E1193
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	4.71031	50.7	-	BDPL01	71	4852	4582	6/7/17	6/28/17	Scaffold	SC	SAMEA1317753	GCA_002207085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/085/GCA_002207085.1_ASM220708v1	-	E1599
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15655	39.6	-	FDMA01	41	2361	2132	2/6/16	3/13/17	Scaffold	SC	SAMEA2382933	GCA_900042385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/385/GCA_900042385.1_12754_1_8	-	2842STDY5753477
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70036	52.1	-	MZPI01	37	4802	4562	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073960	GCA_002039595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/595/GCA_002039595.1_ASM203959v1	28705959	CFSAN057661
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.80961	32.7	-	CTZS01	26	2919	2755	3/31/15	3/4/17	Scaffold	SC	SAMEA1030288	GCA_001228085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/085/GCA_001228085.1_6401_6_11	-	F902 02
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.72925	33.6	-	CTSE01	187	2721	2309	3/31/15	4/21/17	Scaffold	SC	SAMEA734737	GCA_001228145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/145/GCA_001228145.1_4351_3_9	-	08-01492
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74656	52.1	-	MZOY01	30	4856	4611	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073970	GCA_002039625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/625/GCA_002039625.1_ASM203962v1	28705959	CFSAN057651
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06027	39.6	-	FFSQ01	36	2267	2041	2/10/16	3/13/17	Scaffold	SC	SAMEA2203830	GCA_900042465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/465/GCA_900042465.1_11679_1_22	-	2245STDY5608969
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	4.66137	50.8	-	BDPM01	134	4855	4507	6/7/17	6/28/17	Scaffold	SC	SAMEA1317755	GCA_002207105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/105/GCA_002207105.1_ASM220710v1	-	E356
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	5.25353	50.2	-	BDPN01	86	5381	5032	6/7/17	6/28/17	Scaffold	SC	SAMEA1317759	GCA_002207125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/125/GCA_002207125.1_ASM220712v1	-	E1642
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.009	39.7	-	FDZR01	34	2208	1973	2/9/16	3/6/17	Scaffold	SC	SAMEA2239309	GCA_900042805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/805/GCA_900042805.1_11861_5_84	-	2842STDY5644693
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.6999	52.1	-	MZPN01	33	4808	4567	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074015	GCA_002039645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/645/GCA_002039645.1_ASM203964v1	28705959	CFSAN057666
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.79754	32.7	-	CUBG01	27	2888	2747	3/31/15	3/4/17	Scaffold	SC	SAMEA1030246	GCA_001228345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/345/GCA_001228345.1_6401_7_8	-	91/5370
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.77968	32.7	-	CTUO01	37	2875	2729	3/31/15	3/4/17	Scaffold	SC	SAMEA734683	GCA_001228385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/385/GCA_001228385.1_4395_6_1	-	07-01319
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69998	52.1	-	MZPQ01	33	4808	4558	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074012	GCA_002039665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/665/GCA_002039665.1_ASM203966v1	28705959	CFSAN057669
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06342	40	-	FEBQ01	32	2057	1883	2/9/16	3/13/17	Scaffold	SC	SAMEA2238552	GCA_900042815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/815/GCA_900042815.1_11860_6_86	-	2842STDY5643923
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	4.92358	50.6	-	BDPO01	71	5138	4735	6/7/17	6/28/17	Scaffold	SC	SAMEA1317762	GCA_002207145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/145/GCA_002207145.1_ASM220714v1	-	E1674
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	4.881	50.7	-	BDPQ01	99	5093	4722	6/7/17	6/28/17	Scaffold	SC	SAMEA1317776	GCA_002207185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/185/GCA_002207185.1_ASM220718v1	-	E704
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.03992	39.6	-	FEEK01	35	2235	2000	2/9/16	3/13/17	Scaffold	SC	SAMEA2238680	GCA_900042825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/825/GCA_900042825.1_11861_2_19	-	2842STDY5644053
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69992	52.1	-	MZPU01	37	4801	4567	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074008	GCA_002039685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/685/GCA_002039685.1_ASM203968v1	28705959	CFSAN057673
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.78017	32.7	-	CUAU01	26	2865	2729	3/31/15	3/4/17	Scaffold	SC	SAMEA1030141	GCA_001228505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/505/GCA_001228505.1_6401_7_15	-	HO 5322 0548 09
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.85696	32.7	-	CTYW01	229	2993	2846	3/31/15	3/5/17	Scaffold	SC	SAMEA862581	GCA_001228725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/725/GCA_001228725.1_5364_1_6	-	DEU6
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.64151	52.1	-	MZPW01	29	4722	4482	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074006	GCA_002039705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/705/GCA_002039705.1_ASM203970v1	28705959	CFSAN057675
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01367	39.7	-	FEEL01	21	2233	2012	2/9/16	3/13/17	Scaffold	SC	SAMEA2238688	GCA_900042835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/835/GCA_900042835.1_11861_2_27	-	2842STDY5644061
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	4.93716	51	-	BDPU01	289	5360	4883	6/7/17	6/28/17	Scaffold	SC	SAMEA1317802	GCA_002207265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/265/GCA_002207265.1_ASM220726v1	-	E956
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	4.92289	50.5	-	BDPZ01	107	5153	4815	6/7/17	6/28/17	Scaffold	SC	SAMEA1317826	GCA_002207365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/365/GCA_002207365.1_ASM220736v1	-	E998
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06661	39.6	-	FEFN01	28	2263	2037	2/9/16	3/13/17	Scaffold	SC	SAMEA2238742	GCA_900042845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/845/GCA_900042845.1_11861_2_81	-	2842STDY5644115
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73552	52	-	MZQF01	44	4860	4618	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073997	GCA_002039745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/745/GCA_002039745.1_ASM203974v1	28705959	CFSAN057684
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.79385	32.7	-	CTUY01	42	2887	2750	3/31/15	3/4/17	Scaffold	SC	SAMEA734697	GCA_001228765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/765/GCA_001228765.1_4395_6_4	-	07-00061
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.80689	32.6	-	CTTJ01	59	2899	2767	3/31/15	4/21/17	Scaffold	SC	SAMEA734754	GCA_001228885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/885/GCA_001228885.1_4351_2_7	-	09-00984
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70119	52.1	-	MZQG01	38	4809	4568	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073996	GCA_002039755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/755/GCA_002039755.1_ASM203975v1	28705959	CFSAN057685
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05925	39.5	-	FEFP01	38	2274	2040	2/9/16	3/13/17	Scaffold	SC	SAMEA2238749	GCA_900042855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/855/GCA_900042855.1_11861_2_88	-	2842STDY5644122
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	5.01025	50.8	-	BDRA01	201	5292	4948	6/7/17	6/28/17	Scaffold	SC	SAMEA1317827	GCA_002207385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/385/GCA_002207385.1_ASM220738v1	-	E821
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	5.01513	50.4	-	BDRB01	200	5361	4880	6/7/17	6/28/17	Scaffold	SC	SAMEA1317830	GCA_002207405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/405/GCA_002207405.1_ASM220740v1	-	E604
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.17454	39.7	-	FEFY01	69	2412	2152	2/9/16	3/13/17	Scaffold	SC	SAMEA2238782	GCA_900042865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/865/GCA_900042865.1_11893_1_25	-	2842STDY5644156
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.6429	52.1	-	MZQC01	33	4727	4476	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074000	GCA_002039785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/785/GCA_002039785.1_ASM203978v1	28705959	CFSAN057681
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.77688	32.7	-	CTUL01	48	2882	2730	3/31/15	3/4/17	Scaffold	SC	SAMEA734687	GCA_001228925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/925/GCA_001228925.1_4395_5_7	-	07-02477
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.79444	32.7	-	CTVX01	45	2907	2752	3/31/15	3/4/17	Scaffold	SC	SAMEA734722	GCA_001229005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/005/GCA_001229005.1_4395_8_11	-	04-03103
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69985	52.1	-	MZQI01	31	4803	4568	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073994	GCA_002039805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/805/GCA_002039805.1_ASM203980v1	28705959	CFSAN057687
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0163	39.8	-	FCPT01	27	2256	2009	2/6/16	3/6/17	Scaffold	SC	SAMEA2238783	GCA_900042875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/875/GCA_900042875.1_11893_1_26	-	2842STDY5644157
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	5.05869	50.4	-	BDRD01	210	5384	4906	6/7/17	6/28/17	Scaffold	SC	SAMEA1317849	GCA_002207445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/445/GCA_002207445.1_ASM220744v1	-	E616
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	5.21181	50.7	-	BDRE01	237	5568	5152	6/7/17	6/28/17	Scaffold	SC	SAMEA1317850	GCA_002207465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/465/GCA_002207465.1_ASM220746v1	-	E618
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09353	39.6	-	FCTT01	30	2324	2092	2/6/16	3/13/17	Scaffold	SC	SAMEA2238807	GCA_900042885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/885/GCA_900042885.1_11893_1_51	-	2842STDY5644181
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69646	52.1	-	MZQK01	39	4796	4563	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073992	GCA_002039815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/815/GCA_002039815.1_ASM203981v1	28705959	CFSAN057689
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.73762	32.7	-	CTVV01	42	2795	2668	3/31/15	4/21/17	Scaffold	SC	SAMEA734685	GCA_001229165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/165/GCA_001229165.1_4395_8_2	-	03-00397
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.81845	32.6	-	CUCH01	36	2920	2762	3/31/15	4/21/17	Scaffold	SC	SAMEA1030188	GCA_001229205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/205/GCA_001229205.1_6437_8_8	-	AR 0650 784
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70364	52.1	-	MZPC01	49	4810	4562	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073966	GCA_002039845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/845/GCA_002039845.1_ASM203984v1	28705959	CFSAN057655
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05449	39.6	-	FCWK01	35	2258	2022	2/6/16	3/15/17	Scaffold	SC	SAMEA2238919	GCA_900042895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/895/GCA_900042895.1_11861_3_67	-	2842STDY5644294
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	5.06283	50.6	-	BDRG01	235	5380	5013	6/7/17	6/28/17	Scaffold	SC	SAMEA1317862	GCA_002207505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/505/GCA_002207505.1_ASM220750v1	-	E645
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	5.01598	50.5	-	BDRK01	217	5358	4989	6/7/17	6/28/17	Scaffold	SC	SAMEA1317891	GCA_002207585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/585/GCA_002207585.1_ASM220758v1	-	E1682
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11404	39.4	-	FCWM01	24	2320	2094	2/6/16	3/5/17	Scaffold	SC	SAMEA2382566	GCA_900042905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/905/GCA_900042905.1_12673_6_21	-	2842STDY5753106
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70058	52.1	-	MZQQ01	38	4807	4571	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073986	GCA_002039855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/855/GCA_002039855.1_ASM203985v1	28705959	CFSAN057695
Staphylococcus aureus subsp. aureus Mu3	418127	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.88581	32.6	-	CTYB01	145	3015	2882	3/31/15	3/5/17	Scaffold	SC	SAMEA862565	GCA_001229265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/265/GCA_001229265.1_5295_1_1	-	MU3
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.75908	32.7	-	CTWA01	54	2868	2745	3/31/15	3/4/17	Scaffold	SC	SAMEA734728	GCA_001229285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/285/GCA_001229285.1_4395_8_9	-	09-00678
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69959	52.1	-	MZQW01	31	4805	4566	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074043	GCA_002039865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/865/GCA_002039865.1_ASM203986v1	28705959	CFSAN057701
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98853	39.8	-	FCWO01	27	2202	1942	2/6/16	3/12/17	Scaffold	SC	SAMEA2382567	GCA_900042915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/915/GCA_900042915.1_12673_6_22	-	2842STDY5753107
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	5.05275	50.7	-	BDRL01	176	5335	4913	6/7/17	6/28/17	Scaffold	SC	SAMEA1317893	GCA_002207605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/605/GCA_002207605.1_ASM220760v1	-	E1542
Escherichia coli	562	PRJEB2796	204550	Proteobacteria	Gammaproteobacteria	5.13531	50.6	-	BDRM01	146	5388	4987	6/7/17	6/28/17	Scaffold	SC	SAMEA1317898	GCA_002207625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/207/625/GCA_002207625.1_ASM220762v1	-	E890
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00446	39.7	-	FCXD01	40	2220	1994	2/6/16	3/13/17	Scaffold	SC	SAMEA2382577	GCA_900042925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/925/GCA_900042925.1_12673_6_32	-	2842STDY5753117
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70038	52.1	-	MZQV01	35	4806	4571	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074044	GCA_002039905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/905/GCA_002039905.1_ASM203990v1	28705959	CFSAN057700
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.81196	32.7	-	CTZV01	30	2919	2766	3/31/15	3/4/17	Scaffold	SC	SAMEA1030245	GCA_001229305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/305/GCA_001229305.1_6401_6_14	-	712181
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.82431	32.7	-	CUBA01	38	2927	2780	3/31/15	3/5/17	Scaffold	SC	SAMEA1030214	GCA_001229405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/405/GCA_001229405.1_6401_7_18	-	HO 7258 0470 05
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.78437	52	-	MZRC01	40	4921	4675	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074037	GCA_002039915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/915/GCA_002039915.1_ASM203991v1	28705959	CFSAN057707
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12076	39.5	-	FCXN01	42	2342	2087	2/6/16	3/15/17	Scaffold	SC	SAMEA2382583	GCA_900042935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/935/GCA_900042935.1_12673_6_38	-	2842STDY5753123
Escherichia coli	562	PRJNA358785	358785	Proteobacteria	Gammaproteobacteria	4.9278	50.6	-	NIHX01	101	5231	4809	7/20/17	7/23/17	Scaffold	National institutes of Food and Drug Control	SAMN06973360	GCA_002222905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/222/905/GCA_002222905.1_ASM222290v1	28686503	FC11897
Escherichia coli	562	PRJNA358785	358785	Proteobacteria	Gammaproteobacteria	4.9306	50.6	-	NIHZ01	102	5241	4810	7/20/17	7/23/17	Scaffold	National institutes of Food and Drug Control	SAMN06973358	GCA_002222945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/222/945/GCA_002222945.1_ASM222294v1	28686503	FC11893
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05769	39.5	-	FDAN01	22	2254	2039	2/6/16	3/5/17	Scaffold	SC	SAMEA2382624	GCA_900042945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/945/GCA_900042945.1_12673_6_79	-	2842STDY5753164
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70137	52.1	-	MZRF01	37	4811	4567	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074034	GCA_002039925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/925/GCA_002039925.1_ASM203992v1	28705959	CFSAN057710
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.81833	32.6	-	CTTM01	42	2912	2775	3/31/15	3/5/17	Scaffold	SC	SAMEA734743	GCA_001229525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/525/GCA_001229525.1_4351_6_11	-	07-03351
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.73885	32.6	-	CTTF01	53	2788	2675	3/31/15	3/4/17	Scaffold	SC	SAMEA734797	GCA_001229565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/565/GCA_001229565.1_4351_5_10	-	08-01490
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70649	52.1	-	MZRD01	49	4806	4570	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074036	GCA_002039965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/965/GCA_002039965.1_ASM203996v1	28705959	CFSAN057708
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00589	39.7	-	FDAZ01	43	2250	1986	2/6/16	3/13/17	Scaffold	SC	SAMEA2382636	GCA_900042955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/955/GCA_900042955.1_12673_6_91	-	2842STDY5753176
Escherichia coli	562	PRJNA358785	358785	Proteobacteria	Gammaproteobacteria	5.30896	50.5	-	NIIB01	132	5599	5115	7/20/17	7/23/17	Scaffold	National institutes of Food and Drug Control	SAMN06973356	GCA_002223005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/005/GCA_002223005.1_ASM222300v1	28686503	FC11884
Escherichia coli	562	PRJNA358785	358785	Proteobacteria	Gammaproteobacteria	4.97164	50.6	-	NIIF01	125	5297	4840	7/20/17	7/23/17	Scaffold	National institutes of Food and Drug Control	SAMN06973352	GCA_002223415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/415/GCA_002223415.1_ASM222341v1	28686503	FC10270
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07797	39.7	-	FDBQ01	36	2294	2055	2/6/16	3/13/17	Scaffold	SC	SAMEA2382654	GCA_900042965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/965/GCA_900042965.1_12673_7_14	-	2842STDY5753195
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69876	52.1	-	MZRK01	40	4802	4564	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074029	GCA_002039985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/039/985/GCA_002039985.1_ASM203998v1	28705959	CFSAN057715
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.75915	32.8	-	CTTV01	89	2849	2597	3/31/15	4/21/17	Scaffold	SC	SAMEA734762	GCA_001229585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/585/GCA_001229585.1_4351_7_3	-	07-03340
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.79879	32.7	-	CUBJ01	27	2887	2753	3/31/15	3/5/17	Scaffold	SC	SAMEA1030192	GCA_001229705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/705/GCA_001229705.1_6401_7_5	-	91/11452
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.65294	52.1	-	MZRI01	33	4762	4515	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074031	GCA_002040005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/005/GCA_002040005.1_ASM204000v1	28705959	CFSAN057713
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0502	39.6	-	FDBU01	27	2259	2021	2/6/16	3/13/17	Scaffold	SC	SAMEA2382657	GCA_900042975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/975/GCA_900042975.1_12673_7_17	-	2842STDY5753198
Escherichia coli	562	PRJNA358785	358785	Proteobacteria	Gammaproteobacteria	4.96821	50.5	-	NIIM01	89	5270	4838	7/20/17	7/23/17	Scaffold	National institutes of Food and Drug Control	SAMN06973345	GCA_002223465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/465/GCA_002223465.1_ASM222346v1	28686503	FC10249
Escherichia coli	562	PRJNA358785	358785	Proteobacteria	Gammaproteobacteria	5.18322	50.7	-	NIII01	112	5487	5106	7/20/17	7/23/17	Scaffold	National institutes of Food and Drug Control	SAMN06973349	GCA_002223475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/475/GCA_002223475.1_ASM222347v1	28686503	FC10257
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09261	39.6	-	FDBY01	36	2299	2045	2/6/16	3/15/17	Scaffold	SC	SAMEA2382661	GCA_900042985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/985/GCA_900042985.1_12673_7_21	-	2842STDY5753202
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.68695	52	-	MZRJ01	36	4790	4548	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074030	GCA_002040015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/015/GCA_002040015.1_ASM204001v1	28705959	CFSAN057714
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.77362	32.7	-	CTRU01	55	2850	2728	3/31/15	4/21/17	Scaffold	SC	SAMEA734681	GCA_001229845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/845/GCA_001229845.1_4351_1_3	-	09-01247
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.79479	32.7	-	CUAJ01	35	2891	2745	3/31/15	3/4/17	Scaffold	SC	SAMEA1030313	GCA_001229865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/865/GCA_001229865.1_6401_6_7	-	T505 30
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.7008	52.1	-	MZRN01	39	4803	4568	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074026	GCA_002040045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/045/GCA_002040045.1_ASM204004v1	28705959	CFSAN057718
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0994	39.5	-	FDDA01	42	2284	2030	2/6/16	3/13/17	Scaffold	SC	SAMEA2382689	GCA_900042995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/995/GCA_900042995.1_12673_7_49	-	2842STDY5753230
Escherichia coli	562	PRJNA358785	358785	Proteobacteria	Gammaproteobacteria	5.23592	50.7	-	NIIR01	115	5511	5156	7/20/17	7/23/17	Scaffold	National institutes of Food and Drug Control	SAMN06973340	GCA_002223495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/495/GCA_002223495.1_ASM222349v1	28686503	FC10237
Escherichia coli	562	PRJNA358785	358785	Proteobacteria	Gammaproteobacteria	5.34042	50.6	-	NIIU01	178	5579	5150	7/20/17	7/23/17	Scaffold	National institutes of Food and Drug Control	SAMN06973337	GCA_002223545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/545/GCA_002223545.1_ASM222354v1	28686503	FC10208
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10822	39.5	-	FDDK01	62	2283	2031	2/6/16	3/13/17	Scaffold	SC	SAMEA2382699	GCA_900043005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/005/GCA_900043005.1_12673_7_59	-	2842STDY5753240
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70148	52.1	-	MZRQ01	28	4807	4565	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074023	GCA_002040065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/065/GCA_002040065.1_ASM204006v1	28705959	CFSAN057721
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.96336	32.6	-	CTWY01	79	3132	2992	3/31/15	3/5/17	Scaffold	SC	SAMEA862611	GCA_001229905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/905/GCA_001229905.1_5119_1_3	-	MAL119
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.76269	32.6	-	CTSH01	52	2837	2717	3/31/15	3/4/17	Scaffold	SC	SAMEA734751	GCA_001229925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/229/925/GCA_001229925.1_4351_2_3	-	09-00980
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74401	52	-	MZRR01	35	4863	4625	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074022	GCA_002040085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/085/GCA_002040085.1_ASM204008v1	28705959	CFSAN057722
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.9917	39.8	-	FDDY01	49	2192	1929	2/6/16	3/13/17	Scaffold	SC	SAMEA2382713	GCA_900043015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/015/GCA_900043015.1_12673_7_73	-	2842STDY5753254
Escherichia coli	562	PRJNA358785	358785	Proteobacteria	Gammaproteobacteria	5.17614	50.7	-	NIIL01	98	5408	4980	7/20/17	7/23/17	Scaffold	National institutes of Food and Drug Control	SAMN06973346	GCA_002223555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/555/GCA_002223555.1_ASM222355v1	28686503	FC10254
Escherichia coli	562	PRJNA358785	358785	Proteobacteria	Gammaproteobacteria	5.35913	50.7	-	NIIH01	162	5720	5318	7/20/17	7/23/17	Scaffold	National institutes of Food and Drug Control	SAMN06973350	GCA_002223565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/565/GCA_002223565.1_ASM222356v1	28686503	FC10268
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99288	39.8	-	FDED01	44	2196	1931	2/6/16	3/15/17	Scaffold	SC	SAMEA2382718	GCA_900043025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/025/GCA_900043025.1_12673_7_78	-	2842STDY5753259
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70054	52.1	-	MZRT01	35	4803	4565	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074020	GCA_002040095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/095/GCA_002040095.1_ASM204009v1	28705959	CFSAN057724
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.83364	32.7	-	CTZX01	32	2941	2779	3/31/15	3/4/17	Scaffold	SC	SAMEA1030227	GCA_001230005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/005/GCA_001230005.1_6401_6_13	-	729192
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.80589	32.6	-	CTSV01	55	2893	2766	3/31/15	3/5/17	Scaffold	SC	SAMEA734800	GCA_001230065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/065/GCA_001230065.1_4351_5_5	-	08-01486
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.68905	52.1	-	MZRU01	39	4795	4551	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074019	GCA_002040125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/125/GCA_002040125.1_ASM204012v1	28705959	CFSAN057725
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06129	39.6	-	FDFZ01	37	2238	2006	2/6/16	3/13/17	Scaffold	SC	SAMEA2382767	GCA_900043035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/035/GCA_900043035.1_12718_4_32	-	2842STDY5753309
Escherichia coli	562	PRJNA358785	358785	Proteobacteria	Gammaproteobacteria	5.14773	50.7	-	NIIP01	148	5429	5043	7/20/17	7/23/17	Scaffold	National institutes of Food and Drug Control	SAMN06973342	GCA_002223715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/715/GCA_002223715.1_ASM222371v1	28686503	FC10246
Escherichia coli	562	PRJNA358785	358785	Proteobacteria	Gammaproteobacteria	4.97888	50.5	-	NIIN01	115	5274	4845	7/20/17	7/23/17	Scaffold	National institutes of Food and Drug Control	SAMN06973344	GCA_002223735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/735/GCA_002223735.1_ASM222373v1	28686503	FC10248
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13194	39.6	-	FDGJ01	44	2376	2117	2/6/16	3/6/17	Scaffold	SC	SAMEA2382777	GCA_900043045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/045/GCA_900043045.1_12718_4_42	-	2842STDY5753319
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69992	52.1	-	MZSE01	29	4805	4567	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074068	GCA_002040135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/135/GCA_002040135.1_ASM204013v1	28705959	CFSAN057735
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.82792	32.7	-	CUAA01	33	2930	2778	3/31/15	3/4/17	Scaffold	SC	SAMEA1030331	GCA_001230105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/105/GCA_001230105.1_6401_6_20	-	1091
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.81281	32.6	-	CTUM01	49	2908	2783	3/31/15	3/5/17	Scaffold	SC	SAMEA734686	GCA_001230425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/425/GCA_001230425.1_4395_5_8	-	07-02789
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70128	52.1	-	MZSH01	31	4805	4566	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074065	GCA_002040145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/145/GCA_002040145.1_ASM204014v1	28705959	CFSAN057738
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08037	39.6	-	FDGK01	35	2303	2044	2/6/16	3/12/17	Scaffold	SC	SAMEA2382778	GCA_900043055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/055/GCA_900043055.1_12718_4_43	-	2842STDY5753320
Escherichia coli	562	PRJNA344524	344524	Proteobacteria	Gammaproteobacteria	4.86642	50.6	-	NIRU01	59	5110	4750	7/21/17	7/24/17	Scaffold	Zhejiang University	SAMN07211057	GCA_002223845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/845/GCA_002223845.1_ASM222384v1	-	CoR-4
Escherichia coli	562	PRJNA344524	344524	Proteobacteria	Gammaproteobacteria	5.16154	50.5	-	NIRW01	72	5450	5064	7/21/17	7/24/17	Scaffold	Zhejiang University	SAMN07211285	GCA_002223855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/855/GCA_002223855.1_ASM222385v1	-	CoR-14
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11393	39.6	-	FDHT01	52	2310	2066	2/6/16	3/13/17	Scaffold	SC	SAMEA2382813	GCA_900043065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/065/GCA_900043065.1_12718_4_78	-	2842STDY5753355
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70102	52.1	-	MZSF01	29	4801	4568	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074067	GCA_002040155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/155/GCA_002040155.1_ASM204015v1	28705959	CFSAN057736
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.687	32.7	-	CTUP01	105	2744	2607	3/31/15	4/21/17	Scaffold	SC	SAMEA734688	GCA_001230485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/485/GCA_001230485.1_4395_5_6	-	07-02389
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.80269	32.7	-	CTRX01	79	2879	2747	3/31/15	3/5/17	Scaffold	SC	SAMEA734792	GCA_001230665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/665/GCA_001230665.1_4351_5_1	-	08-01491
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70032	52.1	-	MZSR01	30	4812	4564	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074055	GCA_002040205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/205/GCA_002040205.1_ASM204020v1	28705959	CFSAN057749
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10121	39.6	-	FDJL01	36	2335	2069	2/6/16	3/13/17	Scaffold	SC	SAMEA2382863	GCA_900043075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/075/GCA_900043075.1_12718_5_33	-	2842STDY5753406
Escherichia coli	562	PRJNA344524	344524	Proteobacteria	Gammaproteobacteria	5.2081	50.6	-	NISB01	82	5437	5031	7/21/17	7/24/17	Scaffold	Zhejiang University	SAMN07211291	GCA_002223905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/905/GCA_002223905.1_ASM222390v1	-	CoR-36
Escherichia coli	562	PRJNA344524	344524	Proteobacteria	Gammaproteobacteria	5.02654	50.6	-	NIRZ01	193	5340	4933	7/21/17	7/24/17	Scaffold	Zhejiang University	SAMN07211289	GCA_002223925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/925/GCA_002223925.1_ASM222392v1	-	CoR-30
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06431	39.7	-	FDLR01	43	2272	2056	2/6/16	3/13/17	Scaffold	SC	SAMEA2382923	GCA_900043085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/085/GCA_900043085.1_12718_5_93	-	2842STDY5753466
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.7014	52.1	-	MZSN01	34	4806	4565	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074059	GCA_002040215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/215/GCA_002040215.1_ASM204021v1	28705959	CFSAN057745
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.73826	32.7	-	CTVM01	49	2800	2665	3/31/15	3/5/17	Scaffold	SC	SAMEA734714	GCA_001230825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/825/GCA_001230825.1_4395_7_7	-	06-01686
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.83716	32.6	-	CTWF01	110	2973	2805	3/31/15	3/5/17	Scaffold	SC	SAMEA862648	GCA_001230885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/885/GCA_001230885.1_5083_7_4	-	IU4
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70239	52.1	-	MZST01	36	4817	4569	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074053	GCA_002040245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/245/GCA_002040245.1_ASM204024v1	28705959	CFSAN057751
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.17353	39.6	-	FDNG01	32	2393	2144	2/6/16	3/5/17	Scaffold	SC	SAMEA2382966	GCA_900043095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/095/GCA_900043095.1_12754_1_41	-	2842STDY5753510
Escherichia coli	562	PRJNA344524	344524	Proteobacteria	Gammaproteobacteria	4.95813	50.7	-	NIRX01	92	5128	4716	7/21/17	7/24/17	Scaffold	Zhejiang University	SAMN07211286	GCA_002223935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/935/GCA_002223935.1_ASM222393v1	-	CoR-19
Escherichia coli	562	PRJNA344524	344524	Proteobacteria	Gammaproteobacteria	5.15768	50.5	-	NIRV01	69	5443	5058	7/21/17	7/24/17	Scaffold	Zhejiang University	SAMN07211284	GCA_002223965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/223/965/GCA_002223965.1_ASM222396v1	-	CoR-13
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.29237	39.9	-	FDNK01	216	2131	1949	2/6/16	3/13/17	Scaffold	SC	SAMEA2382970	GCA_900043115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/115/GCA_900043115.1_12754_1_45	-	2842STDY5753514
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70222	52.1	-	MZSJ01	38	4807	4563	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074063	GCA_002040255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/255/GCA_002040255.1_ASM204025v1	28705959	CFSAN057740
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.8066	32.6	-	CTTA01	48	2892	2774	3/31/15	3/5/17	Scaffold	SC	SAMEA734736	GCA_001231225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/225/GCA_001231225.1_4351_3_8	-	08-01671
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.78025	32.7	-	CTVF01	41	2869	2732	3/31/15	4/21/17	Scaffold	SC	SAMEA734695	GCA_001231305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/305/GCA_001231305.1_4395_7_1	-	06-02459
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70062	52.1	-	MZSX01	40	4804	4562	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074049	GCA_002040285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/285/GCA_002040285.1_ASM204028v1	28705959	CFSAN057755
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01486	39.8	-	FDNP01	22	2248	2004	2/6/16	3/18/17	Scaffold	SC	SAMEA2382976	GCA_900043125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/125/GCA_900043125.1_12754_1_51	-	2842STDY5753520
Escherichia coli	562	PRJNA385738	385738	Proteobacteria	Gammaproteobacteria	5.08305	50.4	-	NMQY01	223	5445	4937	7/25/17	7/28/17	Scaffold	"West China Hospital, Sichuan University"	SAMN07340853	GCA_002225075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/075/GCA_002225075.1_ASM222507v1	-	WCHEC-LL123
Escherichia coli	562	PRJNA394656	394656	Proteobacteria	Gammaproteobacteria	5.11321	51	-	NMWW01	495	5440	5026	8/14/17	8/16/17	Scaffold	RESCOL	SAMN07357130	GCA_002250825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/250/825/GCA_002250825.1_ASM225082v1	28797328	ZTA15/01169-1EB1
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04831	39.6	-	FDOC01	38	2258	2019	2/6/16	3/13/17	Scaffold	SC	SAMEA2382990	GCA_900043135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/135/GCA_900043135.1_12754_1_65	-	2842STDY5753534
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73945	52.2	-	MZTA01	42	4872	4619	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074107	GCA_002040305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/305/GCA_002040305.1_ASM204030v1	28705959	CFSAN057758
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.84093	32.7	-	CTWX01	248	2978	2826	3/31/15	3/5/17	Scaffold	SC	SAMEA862650	GCA_001231365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/365/GCA_001231365.1_5083_7_6	-	IU7
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.80421	32.7	-	CTVB01	62	2891	2770	3/31/15	4/21/17	Scaffold	SC	SAMEA734718	GCA_001231445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/445/GCA_001231445.1_4395_7_11	-	06-02400
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69679	52.1	-	MZSU01	36	4800	4563	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074052	GCA_002040315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/315/GCA_002040315.1_ASM204031v1	28705959	CFSAN057752
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99042	39.8	-	FDPM01	46	2194	1933	2/9/16	3/13/17	Scaffold	SC	SAMEA2383028	GCA_900043145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/145/GCA_900043145.1_12754_2_8	-	2842STDY5753573
Escherichia coli	562	PRJNA396689	396689	Proteobacteria	Gammaproteobacteria	5.00707	50.3	-	NQIV01	243	5093	4761	8/23/17	8/25/17	Scaffold	DTU	SAMN07431092	GCA_002268295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/295/GCA_002268295.1_ASM226829v1	-	EC-117-6-1
Escherichia coli	562	PRJNA396689	396689	Proteobacteria	Gammaproteobacteria	5.08709	50.7	-	NQIW01	354	5320	4983	8/23/17	8/25/17	Scaffold	DTU	SAMN07431091	GCA_002268315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/315/GCA_002268315.1_ASM226831v1	-	EC-117-6-2
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.97474	39.9	-	FDPP01	45	2170	1924	2/9/16	3/13/17	Scaffold	SC	SAMEA2383031	GCA_900043155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/155/GCA_900043155.1_12754_2_11	-	2842STDY5753576
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69893	52.1	-	MZSV01	38	4803	4563	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074051	GCA_002040325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/325/GCA_002040325.1_ASM204032v1	28705959	CFSAN057753
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.81203	32.6	-	CTUR01	46	2894	2774	3/31/15	4/21/17	Scaffold	SC	SAMEA734684	GCA_001231525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/525/GCA_001231525.1_4395_6_10	-	07-00655
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.80048	32.7	-	CTVQ01	44	2915	2756	3/31/15	3/5/17	Scaffold	SC	SAMEA734720	GCA_001231565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/565/GCA_001231565.1_4395_8_1	-	04-03111
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73682	52.1	-	MZSZ01	39	4866	4621	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074108	GCA_002040365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/365/GCA_002040365.1_ASM204036v1	28705959	CFSAN057757
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.9704	39.8	-	FEGZ01	34	2177	1931	2/9/16	3/13/17	Scaffold	SC	SAMEA2383079	GCA_900043165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/165/GCA_900043165.1_12754_2_59	-	2842STDY5753624
Escherichia coli	562	PRJNA396689	396689	Proteobacteria	Gammaproteobacteria	5.26572	50.7	-	NQIT01	288	5656	5198	8/23/17	8/25/17	Scaffold	DTU	SAMN07431094	GCA_002268335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/335/GCA_002268335.1_ASM226833v1	-	EC-117-4-3
Escherichia coli	562	PRJNA396689	396689	Proteobacteria	Gammaproteobacteria	5.09001	50.7	-	NQIY01	465	5352	4976	8/23/17	8/25/17	Scaffold	DTU	SAMN07431089	GCA_002268375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/375/GCA_002268375.1_ASM226837v1	-	EC-117-4-2
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07198	39.5	-	FEIW01	44	2242	2026	2/9/16	3/5/17	Scaffold	SC	SAMEA2383130	GCA_900043175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/175/GCA_900043175.1_12754_3_15	-	2842STDY5753676
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73591	52.1	-	MZTB01	43	4867	4624	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074106	GCA_002040385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/385/GCA_002040385.1_ASM204038v1	28705959	CFSAN057759
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.84071	32.7	-	CUBQ01	31	2970	2783	3/31/15	3/5/17	Scaffold	SC	SAMEA1030317	GCA_001231805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/805/GCA_001231805.1_6437_8_16	-	ARI4
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.73321	32.7	-	CUAY01	26	2796	2658	3/31/15	3/5/17	Scaffold	SC	SAMEA1030198	GCA_001231865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/865/GCA_001231865.1_6401_7_19	-	HO 7258 0475 05
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73491	52.1	-	MZTC01	34	4861	4623	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074105	GCA_002040395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/395/GCA_002040395.1_ASM204039v1	28705959	CFSAN057760
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10494	39.6	-	FEJH01	41	2319	2062	2/9/16	3/13/17	Scaffold	SC	SAMEA2383141	GCA_900043185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/185/GCA_900043185.1_12754_3_26	-	2842STDY5753687
Escherichia coli	562	PRJNA396689	396689	Proteobacteria	Gammaproteobacteria	4.92671	50.8	-	NQJA01	432	5049	4708	8/23/17	8/25/17	Scaffold	DTU	SAMN07431087	GCA_002268385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/385/GCA_002268385.1_ASM226838v1	-	EC-117-4-1
Escherichia coli	562	PRJNA396689	396689	Proteobacteria	Gammaproteobacteria	4.86678	50.7	-	NQJB01	432	4997	4646	8/23/17	8/25/17	Scaffold	DTU	SAMN07431086	GCA_002268395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/395/GCA_002268395.1_ASM226839v1	-	EC-117-3-2
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.97272	39.7	-	FEJT01	25	2171	1936	2/9/16	3/13/17	Scaffold	SC	SAMEA2383153	GCA_900043195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/195/GCA_900043195.1_12754_3_38	-	2842STDY5753699
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69414	52.1	-	MZTE01	38	4800	4553	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074103	GCA_002040405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/405/GCA_002040405.1_ASM204040v1	28705959	CFSAN057762
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.76076	32.7	-	CTSO01	57	2859	2701	3/31/15	3/5/17	Scaffold	SC	SAMEA734794	GCA_001231945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/945/GCA_001231945.1_4351_3_2	-	08-01530
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.80418	32.7	-	CTTW01	83	2881	2742	3/31/15	4/21/17	Scaffold	SC	SAMEA734765	GCA_001232185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/185/GCA_001232185.1_4351_8_1	-	07-02997
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69942	52.1	-	MZTK01	41	4807	4560	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074097	GCA_002040445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/445/GCA_002040445.1_ASM204044v1	28705959	CFSAN057768
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00476	39.8	-	FEMP01	19	2234	1994	2/9/16	3/13/17	Scaffold	SC	SAMEA2383229	GCA_900043205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/205/GCA_900043205.1_12754_4_19	-	2842STDY5753776
Escherichia coli	562	PRJNA396689	396689	Proteobacteria	Gammaproteobacteria	4.9101	50.6	-	NQJC01	237	5027	4681	8/23/17	8/25/17	Scaffold	DTU	SAMN07431085	GCA_002268435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/435/GCA_002268435.1_ASM226843v1	-	EC-117-2-4
Escherichia coli	562	PRJNA396689	396689	Proteobacteria	Gammaproteobacteria	4.92844	50.6	-	NQIZ01	220	5057	4735	8/23/17	8/25/17	Scaffold	DTU	SAMN07431088	GCA_002268455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/268/455/GCA_002268455.1_ASM226845v1	-	EC-117-5-3
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.03742	39.7	-	FEON01	48	2233	1984	2/9/16	3/15/17	Scaffold	SC	SAMEA2674629	GCA_900043215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/215/GCA_900043215.1_14412_3_7	-	2842STDY5881889
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.68404	52.1	-	MZTD01	33	4785	4547	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074104	GCA_002040465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/465/GCA_002040465.1_ASM204046v1	28705959	CFSAN057761
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.84591	32.7	-	CTXR01	78	2971	2867	3/31/15	3/5/17	Scaffold	SC	SAMEA862592	GCA_001232225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/225/GCA_001232225.1_5197_1_10	-	LIT89
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.80843	32.6	-	CTSM01	41	2896	2775	3/31/15	3/5/17	Scaffold	SC	SAMEA734679	GCA_001232345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/345/GCA_001232345.1_4351_1_9	-	09-01244
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69803	52.1	-	MZTF01	34	4799	4561	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074102	GCA_002040485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/485/GCA_002040485.1_ASM204048v1	28705959	CFSAN057763
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07639	39.6	-	FDTW01	38	2260	2023	2/9/16	3/13/17	Scaffold	SC	SAMEA2239233	GCA_900043495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/495/GCA_900043495.1_11861_5_5	-	2842STDY5644616
Escherichia coli	562	PRJNA389247	389247	Proteobacteria	Gammaproteobacteria	4.78151	50.8	-	NIFR01	112	4969	4617	8/25/17	8/28/17	Scaffold	The Hong Kong Polytechnic University	SAMN07193014	GCA_002270115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/270/115/GCA_002270115.1_ASM227011v1	-	SZM531-1
Escherichia coli	562	PRJNA389247	389247	Proteobacteria	Gammaproteobacteria	5.40892	50.7	-	NIFV01	761	5858	5126	8/25/17	8/28/17	Scaffold	The Hong Kong Polytechnic University	SAMN07193010	GCA_002270125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/270/125/GCA_002270125.1_ASM227012v1	-	SZH29-1
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.01836	39.8	-	FFQW01	99	2223	1959	2/9/16	3/15/17	Scaffold	SC	SAMEA2203772	GCA_900043665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/665/GCA_900043665.1_11511_8_5	-	2245STDY5608911
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69916	52.1	-	MZTG01	37	4797	4563	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074101	GCA_002040495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/495/GCA_002040495.1_ASM204049v1	28705959	CFSAN057764
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.85026	32.6	-	CTYG01	71	2969	2852	3/31/15	4/21/17	Scaffold	SC	SAMEA862590	GCA_001232385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/385/GCA_001232385.1_5197_1_4	-	United Kingdom102
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.79082	32.6	-	CTUW01	53	2874	2741	3/31/15	3/5/17	Scaffold	SC	SAMEA734696	GCA_001232445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/445/GCA_001232445.1_4395_6_11	-	07-00058
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69929	52.1	-	MZSW01	29	4807	4566	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074050	GCA_002040525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/525/GCA_002040525.1_ASM204052v1	28705959	CFSAN057754
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.23325	39.7	-	FFQY01	286	2424	2159	2/9/16	3/13/17	Scaffold	SC	SAMEA2203773	GCA_900043675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/675/GCA_900043675.1_11657_8_7	-	2245STDY5608912
Escherichia coli	562	PRJNA389247	389247	Proteobacteria	Gammaproteobacteria	4.6179	50.8	-	NIFQ01	126	4789	4405	8/25/17	8/28/17	Scaffold	The Hong Kong Polytechnic University	SAMN07193015	GCA_002270155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/270/155/GCA_002270155.1_ASM227015v1	-	SZM489-1
Escherichia coli	562	PRJNA389247	389247	Proteobacteria	Gammaproteobacteria	4.79907	50.8	-	NIFS01	111	4954	4608	8/25/17	8/28/17	Scaffold	The Hong Kong Polytechnic University	SAMN07193013	GCA_002270165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/270/165/GCA_002270165.1_ASM227016v1	-	SZM537-1
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.12964	39.6	-	FFQZ01	41	2339	2120	2/9/16	3/6/17	Scaffold	SC	SAMEA2203775	GCA_900043685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/685/GCA_900043685.1_11679_1_5	-	2245STDY5608914
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.82974	52	-	MZSY01	35	4978	4724	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074048	GCA_002040545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/545/GCA_002040545.1_ASM204054v1	28705959	CFSAN057756
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.88517	32.7	-	CTYK01	74	3043	2889	3/31/15	4/21/17	Scaffold	SC	SAMEA862605	GCA_001232525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/525/GCA_001232525.1_5295_1_4	-	MU6
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.77068	32.7	-	CTSW01	65	2856	2718	3/31/15	4/21/17	Scaffold	SC	SAMEA734773	GCA_001232785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/785/GCA_001232785.1_4351_5_11	-	08-01482
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70461	52.1	-	MZTM01	34	4812	4568	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074095	GCA_002040565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/565/GCA_002040565.1_ASM204056v1	28705959	CFSAN057770
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99125	39.8	-	FFRK01	41	2192	1943	2/9/16	6/9/17	Scaffold	SC	SAMEA2203790	GCA_900043695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/695/GCA_900043695.1_11511_8_10	-	2245STDY5608929
Escherichia coli	562	PRJNA389247	389247	Proteobacteria	Gammaproteobacteria	4.78696	50.7	-	NIFT01	160	4960	4485	8/25/17	8/28/17	Scaffold	The Hong Kong Polytechnic University	SAMN07193012	GCA_002270175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/270/175/GCA_002270175.1_ASM227017v1	-	SZM584-1
Escherichia coli	562	PRJNA389247	389247	Proteobacteria	Gammaproteobacteria	4.72188	50.8	-	NIFU01	125	4894	4555	8/25/17	8/28/17	Scaffold	The Hong Kong Polytechnic University	SAMN07193011	GCA_002270245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/270/245/GCA_002270245.1_ASM227024v1	-	SZM457-1
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.18036	39.6	-	FFRW01	66	2424	2160	2/10/16	3/13/17	Scaffold	SC	SAMEA2203804	GCA_900043705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/705/GCA_900043705.1_11658_2_94	-	2245STDY5608943
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.71069	52.1	-	MZTH01	44	4811	4570	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074100	GCA_002040585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/585/GCA_002040585.1_ASM204058v1	28705959	CFSAN057765
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.76758	32.7	-	CTSD01	57	2839	2719	3/31/15	3/5/17	Scaffold	SC	SAMEA734796	GCA_001232805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/805/GCA_001232805.1_4351_5_7	-	08-01488
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.88848	32.6	-	CUBC01	38	3000	2843	3/31/15	3/5/17	Scaffold	SC	SAMEA1030237	GCA_001232845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/845/GCA_001232845.1_6401_7_21	-	HO 7374 0468 05
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70787	52.1	-	MZTI01	40	4817	4565	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074099	GCA_002040595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/595/GCA_002040595.1_ASM204059v1	28705959	CFSAN057766
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99214	39.8	-	FFRX01	53	2197	1934	2/10/16	3/13/17	Scaffold	SC	SAMEA2203806	GCA_900043715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/715/GCA_900043715.1_11657_4_13	-	2245STDY5608945
Escherichia coli	562	PRJNA389247	389247	Proteobacteria	Gammaproteobacteria	4.87335	50.9	-	NIFX01	135	5054	4700	8/25/17	8/28/17	Scaffold	The Hong Kong Polytechnic University	SAMN07193008	GCA_002270255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/270/255/GCA_002270255.1_ASM227025v1	-	SZM334-1
Escherichia coli	562	PRJNA389489	389489	Proteobacteria	Gammaproteobacteria	4.95457	51	-	NJIO01	181	5145	4814	8/29/17	8/30/17	Scaffold	Polyu	SAMN07251589	GCA_002277045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/045/GCA_002277045.1_ASM227704v1	-	E27
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.10133	39.6	-	FFRZ01	40	2296	2076	2/10/16	3/13/17	Scaffold	SC	SAMEA2203807	GCA_900043725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/725/GCA_900043725.1_11679_1_14	-	2245STDY5608946
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69885	52.1	-	MZTJ01	36	4801	4565	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074098	GCA_002040605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/605/GCA_002040605.1_ASM204060v1	28705959	CFSAN057767
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.7993	32.7	-	CUCF01	32	2915	2736	3/31/15	3/5/17	Scaffold	SC	SAMEA1030209	GCA_001232985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/985/GCA_001232985.1_6437_8_9	-	Btn 1626
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.80791	32.6	-	CTSX01	54	2915	2765	3/31/15	3/5/17	Scaffold	SC	SAMEA734741	GCA_001233125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/125/GCA_001233125.1_4351_6_3	-	07-03353
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.64256	52.1	-	MZTL01	36	4723	4489	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074096	GCA_002040615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/615/GCA_002040615.1_ASM204061v1	28705959	CFSAN057769
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09539	39.5	-	FFSA01	55	2315	2035	2/10/16	3/13/17	Scaffold	SC	SAMEA2203809	GCA_900043735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/735/GCA_900043735.1_11657_4_14	-	2245STDY5608948
Escherichia coli	562	PRJNA389489	389489	Proteobacteria	Gammaproteobacteria	5.17186	50.6	-	NJIQ01	65	5371	4979	8/29/17	8/30/17	Scaffold	Polyu	SAMN07251587	GCA_002277075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/075/GCA_002277075.1_ASM227707v1	-	E15
Escherichia coli	562	PRJNA389489	389489	Proteobacteria	Gammaproteobacteria	4.55277	52	-	NJIP01	485	4697	4301	8/29/17	8/30/17	Scaffold	Polyu	SAMN07251588	GCA_002277085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/085/GCA_002277085.1_ASM227708v1	-	E21
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0944	39.6	-	FFSD01	27	2331	2063	2/10/16	3/13/17	Scaffold	SC	SAMEA2203812	GCA_900043745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/745/GCA_900043745.1_11511_8_14	-	2245STDY5608951
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69994	52.1	-	MZTP01	38	4804	4566	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074091	GCA_002040665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/665/GCA_002040665.1_ASM204066v1	28705959	CFSAN057774
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.79713	32.7	-	CUBH01	31	2878	2746	3/31/15	3/5/17	Scaffold	SC	SAMEA1030255	GCA_001233145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/145/GCA_001233145.1_6401_7_9	-	91/5368
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.79364	32.7	-	CTUK01	52	2879	2744	3/31/15	3/5/17	Scaffold	SC	SAMEA734693	GCA_001233345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/345/GCA_001233345.1_4395_5_11	-	07-01497
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69759	52.1	-	MZTN01	38	4809	4562	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074094	GCA_002040675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/675/GCA_002040675.1_ASM204067v1	28705959	CFSAN057771
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.10244	39.5	-	FFSF01	24	2332	2095	2/10/16	3/13/17	Scaffold	SC	SAMEA2203814	GCA_900043755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/755/GCA_900043755.1_11511_8_16	-	2245STDY5608953
Escherichia coli	562	PRJNA389489	389489	Proteobacteria	Gammaproteobacteria	4.73929	51.2	-	NJIS01	289	4934	4475	8/29/17	8/30/17	Scaffold	Polyu	SAMN07251585	GCA_002277135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/135/GCA_002277135.1_ASM227713v1	-	E2
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.43551	50.3	-	MRVT01	226	5984	5458	9/5/17	9/7/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN06131770	GCA_002286435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/435/GCA_002286435.1_ASM228643v1	-	STEC 480-3
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.10839	39.5	-	FFSL01	60	2281	2033	2/10/16	3/5/17	Scaffold	SC	SAMEA2203823	GCA_900043765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/765/GCA_900043765.1_11679_1_19	-	2245STDY5608962
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69713	52.1	-	MZTS01	32	4798	4569	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074088	GCA_002040705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/705/GCA_002040705.1_ASM204070v1	28705959	CFSAN057777
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.77418	32.7	-	CTUV01	44	2859	2729	3/31/15	3/5/17	Scaffold	SC	SAMEA734781	GCA_001233425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/425/GCA_001233425.1_4395_5_1	-	07-02986
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.8146	32.7	-	CUCG01	33	2914	2763	3/31/15	3/5/17	Scaffold	SC	SAMEA1030170	GCA_001233485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/485/GCA_001233485.1_6437_8_7	-	99St18131
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70014	52.1	-	MZTO01	42	4805	4558	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074093	GCA_002040735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/735/GCA_002040735.1_ASM204073v1	28705959	CFSAN057772
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.98568	39.8	-	FFSI01	50	2185	1920	2/10/16	3/13/17	Scaffold	SC	SAMEA2203820	GCA_900043775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/775/GCA_900043775.1_11679_1_16	-	2245STDY5608959
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.52398	50.4	-	MRVS01	183	6060	5551	9/5/17	9/7/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN06131769	GCA_002286445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/445/GCA_002286445.1_ASM228644v1	-	STEC 536-9
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.42612	50.3	-	MRVU01	224	5971	5458	9/5/17	9/7/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN06131771	GCA_002286455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/455/GCA_002286455.1_ASM228645v1	-	STEC 476-14
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.14585	39.5	-	FFSW01	198	2355	2057	2/10/16	3/8/17	Scaffold	SC	SAMEA2203835	GCA_900043785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/785/GCA_900043785.1_11658_2_91	-	2245STDY5608974
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70165	52.1	-	MZTT01	43	4814	4559	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074087	GCA_002040765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/765/GCA_002040765.1_ASM204076v1	28705959	CFSAN057778
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.87272	32.7	-	CUBT01	28	2998	2842	3/31/15	3/5/17	Scaffold	SC	SAMEA1030319	GCA_001233525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/525/GCA_001233525.1_6437_8_15	-	ARI1
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.88434	32.7	-	CUBS01	37	3035	2850	3/31/15	3/5/17	Scaffold	SC	SAMEA1030328	GCA_001233605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/605/GCA_001233605.1_6437_8_17	-	ARI5
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70327	52.1	-	MZTU01	37	4803	4568	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074086	GCA_002040785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/785/GCA_002040785.1_ASM204078v1	28705959	CFSAN057779
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.16575	39.7	-	FFTC01	66	2406	2148	2/10/16	3/13/17	Scaffold	SC	SAMEA2203841	GCA_900043795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/795/GCA_900043795.1_11658_2_89	-	2245STDY5608980
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.52474	50.4	-	MRVR01	235	6101	5560	9/5/17	9/7/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN06131768	GCA_002286465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/465/GCA_002286465.1_ASM228646v1	-	STEC 479BS2
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.42425	50.3	-	MRVV01	219	5958	5442	9/5/17	9/7/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN06131772	GCA_002286515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/515/GCA_002286515.1_ASM228651v1	-	STEC 510-5
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06739	39.8	-	FFTF01	39	2280	2032	2/10/16	3/13/17	Scaffold	SC	SAMEA2203846	GCA_900043805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/805/GCA_900043805.1_11657_4_23	-	2245STDY5608985
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69874	52.1	-	MZTV01	28	4801	4559	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074085	GCA_002040805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/805/GCA_002040805.1_ASM204080v1	28705959	CFSAN057780
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.78288	32.7	-	CTUE01	40	2874	2747	3/31/15	3/5/17	Scaffold	SC	SAMEA734769	GCA_001233885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/885/GCA_001233885.1_4351_8_9	-	07-02987
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.79695	32.6	-	CTVH01	58	2884	2736	3/31/15	3/5/17	Scaffold	SC	SAMEA734694	GCA_001233945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/945/GCA_001233945.1_4395_7_12	-	06-01203
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.6984	52.1	-	MZTW01	37	4804	4569	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074084	GCA_002040825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/825/GCA_002040825.1_ASM204082v1	28705959	CFSAN057781
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.98514	39.8	-	FFTG01	45	2193	1931	2/10/16	3/13/17	Scaffold	SC	SAMEA2203847	GCA_900043815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/815/GCA_900043815.1_11658_2_88	-	2245STDY5608986
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.5205	50.4	-	MRVW01	245	6100	5565	9/5/17	9/7/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN06131773	GCA_002286525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/525/GCA_002286525.1_ASM228652v1	-	STEC 625C-4
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.37364	50.5	-	MRVY01	205	5851	5308	9/5/17	9/7/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN06131775	GCA_002286535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/535/GCA_002286535.1_ASM228653v1	-	STEC 440
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06952	39.6	-	FFTI01	29	2283	2049	2/10/16	3/12/17	Scaffold	SC	SAMEA2203850	GCA_900043825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/825/GCA_900043825.1_11511_8_21	-	2245STDY5608990
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69717	52.1	-	MZTX01	35	4810	4556	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074083	GCA_002040835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/835/GCA_002040835.1_ASM204083v1	28705959	CFSAN057782
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.83085	32.6	-	CTYP01	135	2944	2799	3/31/15	3/5/17	Scaffold	SC	SAMEA862600	GCA_001234105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/105/GCA_001234105.1_5295_1_7	-	MU10
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.72879	32.7	-	CTSF01	46	2783	2681	3/31/15	3/5/17	Scaffold	SC	SAMEA734678	GCA_001234265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/265/GCA_001234265.1_4351_1_8	-	98-10618
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70032	52.1	-	MZTY01	33	4806	4564	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074082	GCA_002040845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/845/GCA_002040845.1_ASM204084v1	28705959	CFSAN057783
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0988	39.6	-	FFTW01	41	2293	2066	2/10/16	3/13/17	Scaffold	SC	SAMEA2203867	GCA_900043835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/835/GCA_900043835.1_11657_4_28	-	2245STDY5609007
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.39711	50.3	-	MRVX01	212	5822	5320	9/5/17	9/7/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN06131774	GCA_002286545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/545/GCA_002286545.1_ASM228654v1	-	STEC 621S1
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.39717	50.6	-	MRVZ01	222	5733	5283	9/5/17	9/7/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN06131776	GCA_002286565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/565/GCA_002286565.1_ASM228656v1	-	STEC 514-2
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.20491	39.6	-	FFUA01	299	2420	2120	2/10/16	3/13/17	Scaffold	SC	SAMEA2203870	GCA_900043845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/845/GCA_900043845.1_11679_1_31	-	2245STDY5609010
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70244	52.1	-	MZUC01	40	4812	4571	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074078	GCA_002040885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/885/GCA_002040885.1_ASM204088v1	28705959	CFSAN057787
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.79897	32.8	-	CTSQ01	73	2859	2695	3/31/15	3/5/17	Scaffold	SC	SAMEA734674	GCA_001234365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/365/GCA_001234365.1_4351_1_4	-	09-01248
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.86202	32.7	-	CTYZ01	189	3009	2868	3/31/15	3/5/17	Scaffold	SC	SAMEA862561	GCA_001234465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/465/GCA_001234465.1_5364_2_6	-	DEU19
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.7025	52.1	-	MZUD01	36	4811	4565	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074136	GCA_002040905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/905/GCA_002040905.1_ASM204090v1	28705959	CFSAN057788
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06212	39.5	-	FFTZ01	34	2279	2029	2/10/16	3/12/17	Scaffold	SC	SAMEA2203871	GCA_900043855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/855/GCA_900043855.1_11511_8_27	-	2245STDY5609011
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.21424	50.4	-	MRWA01	128	5490	5024	9/5/17	9/7/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN06131777	GCA_002286585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/585/GCA_002286585.1_ASM228658v1	-	STEC 573-4
Escherichia coli	562	PRJNA285020	285020	Proteobacteria	Gammaproteobacteria	5.02951	50.4	-	MRWB01	249	5478	4838	9/5/17	9/7/17	Scaffold	"University of Groningen, University Medical Center Groningen"	SAMN06131778	GCA_002286605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/286/605/GCA_002286605.1_ASM228660v1	-	STEC 587-5
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09123	39.6	-	FFUD01	44	2300	2047	2/10/16	3/5/17	Scaffold	SC	SAMEA2203875	GCA_900043865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/865/GCA_900043865.1_11658_2_85	-	2245STDY5609015
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70043	52.1	-	MZUE01	34	4809	4567	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074135	GCA_002040915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/915/GCA_002040915.1_ASM204091v1	28705959	CFSAN057789
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.79218	32.7	-	CTTT01	114	2888	2732	3/31/15	4/21/17	Scaffold	SC	SAMEA734763	GCA_001234645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/645/GCA_001234645.1_4351_7_6	-	07-03345
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.75808	32.7	-	CTTY01	57	2835	2700	3/31/15	3/5/17	Scaffold	SC	SAMEA734784	GCA_001234705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/705/GCA_001234705.1_4351_8_3	-	07-02990
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69815	52.1	-	MZUF01	41	4802	4566	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074134	GCA_002040925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/925/GCA_002040925.1_ASM204092v1	28705959	CFSAN057790
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.12084	39.6	-	FFUF01	49	2342	2086	2/10/16	3/13/17	Scaffold	SC	SAMEA2203876	GCA_900043875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/875/GCA_900043875.1_11893_8_14	-	2245STDY5609016
Escherichia coli	562	PRJNA396689	396689	Proteobacteria	Gammaproteobacteria	5.07839	50.8	-	NQIX01	427	5361	5000	8/23/17	9/8/17	Scaffold	DTU	SAMN07431090	GCA_002287275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/287/275/GCA_002287275.1_ASM228727v1	-	EC-117-5-1
Escherichia coli	562	PRJNA221632	221632	Proteobacteria	Gammaproteobacteria	5.27295	50.7	-	NTNC01	149	5602	5157	9/17/17	9/19/17	Scaffold	FDA	SAMN07624453	GCA_002307655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/655/GCA_002307655.1_ASM230765v1	-	N43684
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11333	39.5	-	FDTR01	49	2314	2087	2/9/16	3/5/17	Scaffold	SC	SAMEA2239229	GCA_900044075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/075/GCA_900044075.1_11861_5_1	-	2842STDY5644612
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70323	52.1	-	MZUG01	37	4812	4569	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074133	GCA_002040965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/965/GCA_002040965.1_ASM204096v1	28705959	CFSAN057791
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.8475	32.7	-	CTWL01	83	2990	2836	3/31/15	3/5/17	Scaffold	SC	SAMEA862651	GCA_001234785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/785/GCA_001234785.1_5083_7_5	-	IU6
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.81053	32.7	-	CTTE01	58	2897	2768	3/31/15	3/5/17	Scaffold	SC	SAMEA734675	GCA_001234845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/845/GCA_001234845.1_4351_1_5	-	09-01249
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69712	52.1	-	MZUK01	32	4802	4554	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074129	GCA_002040975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/975/GCA_002040975.1_ASM204097v1	28705959	CFSAN057795
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.207	39.6	-	FFSG01	108	2435	2193	2/10/16	3/13/17	Scaffold	SC	SAMEA2203817	GCA_900044115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/115/GCA_900044115.1_11657_8_11	-	2245STDY5608956
Escherichia coli	562	PRJNA400117	400117	Proteobacteria	Gammaproteobacteria	5.0281	50.6	-	NSBN01	106	5287	4962	9/20/17	9/22/17	Scaffold	zhejiang University 	SAMN07556810	GCA_002317635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/635/GCA_002317635.1_ASM231763v1	-	ECO3347
Escherichia coli	562	PRJNA400117	400117	Proteobacteria	Gammaproteobacteria	5.03959	50.6	-	NSBQ01	121	5291	4969	9/20/17	9/22/17	Scaffold	zhejiang University 	SAMN07556807	GCA_002317645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/645/GCA_002317645.1_ASM231764v1	-	ECO3347
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.07777	39.7	-	FFTK01	35	2284	2049	2/10/16	3/5/17	Scaffold	SC	SAMEA2203853	GCA_900044125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/125/GCA_900044125.1_11657_8_13	-	2245STDY5608993
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70241	52.1	-	MZUI01	40	4816	4569	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074131	GCA_002040985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/040/985/GCA_002040985.1_ASM204098v1	28705959	CFSAN057793
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.77355	32.6	-	CTVI01	33	2879	2720	3/31/15	3/5/17	Scaffold	SC	SAMEA734711	GCA_001234905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/905/GCA_001234905.1_4395_7_5	-	06-01583
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.80221	32.7	-	CTSN01	58	2884	2758	3/31/15	3/5/17	Scaffold	SC	SAMEA734680	GCA_001234985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/234/985/GCA_001234985.1_4351_1_2	-	09-01246
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70144	52.1	-	MZUN01	38	4814	4569	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074126	GCA_002041025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/025/GCA_002041025.1_ASM204102v1	28705959	CFSAN057798
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05896	39.6	-	FDTU01	42	2247	2001	2/9/16	3/13/17	Scaffold	SC	SAMEA2239232	GCA_900044255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/255/GCA_900044255.1_11861_5_4	-	2842STDY5644615
Escherichia coli	562	PRJNA400117	400117	Proteobacteria	Gammaproteobacteria	5.03649	50.6	-	NSBP01	115	5298	4972	9/20/17	9/22/17	Scaffold	zhejiang University 	SAMN07556808	GCA_002317655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/655/GCA_002317655.1_ASM231765v1	-	ECO3347
Escherichia coli	562	PRJNA400117	400117	Proteobacteria	Gammaproteobacteria	5.03579	50.6	-	NSBM01	106	5296	4971	9/20/17	9/22/17	Scaffold	zhejiang University 	SAMN07556811	GCA_002317695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/695/GCA_002317695.1_ASM231769v1	-	ECO3347
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13086	39.6	-	FDZH01	35	2374	2126	2/9/16	3/5/17	Scaffold	SC	SAMEA2238443	GCA_900044265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/265/GCA_900044265.1_11860_5_73	-	2842STDY5643813
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74332	52.1	-	MZUJ01	78	4871	4608	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074130	GCA_002041065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/065/GCA_002041065.1_ASM204106v1	28705959	CFSAN057794
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.8224	32.7	-	CUAX01	26	2942	2765	3/31/15	3/5/17	Scaffold	SC	SAMEA1030169	GCA_001235025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/025/GCA_001235025.1_6401_7_17	-	HO 7230 0407 05
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.80177	32.6	-	CTSP01	49	2878	2747	3/31/15	3/5/17	Scaffold	SC	SAMEA734723	GCA_001235185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/185/GCA_001235185.1_4351_3_4	-	08-01667
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.76123	52.1	-	MZUM01	32	4902	4643	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074127	GCA_002041085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/085/GCA_002041085.1_ASM204108v1	28705959	CFSAN057797
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13886	39.5	-	FCQM01	34	2351	2104	2/6/16	3/13/17	Scaffold	SC	SAMEA2238999	GCA_900044675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/675/GCA_900044675.1_11861_4_53	-	2842STDY5644375
Escherichia coli	562	PRJNA400117	400117	Proteobacteria	Gammaproteobacteria	5.03618	50.6	-	NSBO01	118	5299	4975	9/20/17	9/22/17	Scaffold	zhejiang University 	SAMN07556809	GCA_002317705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/705/GCA_002317705.1_ASM231770v1	-	ECO3347
Escherichia coli	562	PRJNA400117	400117	Proteobacteria	Gammaproteobacteria	5.02551	50.6008	plasmid pMCR-1:CM008278.1	NSBS01	108	5294	4954	9/20/17	9/22/17	Scaffold	zhejiang University 	SAMN07556805	GCA_002317725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/725/GCA_002317725.1_ASM231772v1	-	ECO3347
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.03506	39.8	-	FFQU01	46	2224	1985	2/9/16	3/13/17	Scaffold	SC	SAMEA2203770	GCA_900044805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/805/GCA_900044805.1_11679_1_3	-	2245STDY5608909
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70012	52.1	-	MZUQ01	30	4807	4566	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074123	GCA_002041095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/095/GCA_002041095.1_ASM204109v1	28705959	CFSAN057801
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.7729	32.8	-	CTUC01	62	2840	2692	3/31/15	3/5/17	Scaffold	SC	SAMEA734782	GCA_001235225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/225/GCA_001235225.1_4351_8_11	-	07-02988
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.98399	32.7	-	CTYD01	352	3177	2985	3/31/15	3/5/17	Scaffold	SC	SAMEA862584	GCA_001235385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/385/GCA_001235385.1_5197_1_6	-	H202
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70392	52.1	-	MZUP01	34	4821	4571	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074124	GCA_002041125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/125/GCA_002041125.1_ASM204112v1	28705959	CFSAN057800
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99207	39.8	-	FFQT01	42	2191	1933	2/9/16	3/8/17	Scaffold	SC	SAMEA2203771	GCA_900044815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/815/GCA_900044815.1_11657_4_2	-	2245STDY5608910
Escherichia coli	562	PRJNA400117	400117	Proteobacteria	Gammaproteobacteria	5.06112	50.5	-	NSBL01	137	5296	4970	9/20/17	9/22/17	Scaffold	zhejiang University 	SAMN07556812	GCA_002317755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/755/GCA_002317755.1_ASM231775v1	-	ECO3347
Escherichia coli	562	PRJNA400117	400117	Proteobacteria	Gammaproteobacteria	4.90986	50.5	-	NSBR01	67	5129	4822	9/20/17	9/22/17	Scaffold	zhejiang University 	SAMN07556806	GCA_002317775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/317/775/GCA_002317775.1_ASM231777v1	-	ECO3347
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.36093	39.8	-	FFRP01	392	2621	2126	2/9/16	6/9/17	Scaffold	SC	SAMEA2203796	GCA_900044825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/825/GCA_900044825.1_11511_8_12	-	2245STDY5608935
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70174	52.1	-	MZUV01	33	4805	4562	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074118	GCA_002041165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/165/GCA_002041165.1_ASM204116v1	28705959	CFSAN057806
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.76229	33	-	CTTZ01	87	2805	2596	3/31/15	4/21/17	Scaffold	SC	SAMEA734744	GCA_001235425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/425/GCA_001235425.1_4351_7_9	-	07-03135
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.86593	32.7	-	CTYU01	76	3015	2878	3/31/15	3/5/17	Scaffold	SC	SAMEA862555	GCA_001235465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/465/GCA_001235465.1_5364_2_2	-	DEU14
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.6996	52.1	-	MZUW01	38	4816	4569	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074117	GCA_002041175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/175/GCA_002041175.1_ASM204117v1	28705959	CFSAN057807
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.13423	39.5	-	FFRR01	179	2340	2075	2/9/16	6/9/17	Scaffold	SC	SAMEA2203797	GCA_900044835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/835/GCA_900044835.1_11511_8_13	-	2245STDY5608936
Escherichia coli	562	PRJNA401000	401000	Proteobacteria	Gammaproteobacteria	5.1387	49.6	-	NWVR01	18	5279	4946	9/27/17	9/27/17	Scaffold	USDA/ARS/WRRC/PSM	SAMN07679720	GCA_002379265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/379/265/GCA_002379265.1_ASM237926v1	-	RM7806
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.13786	39.7	-	FFSH01	28	2343	2111	2/10/16	3/12/17	Scaffold	SC	SAMEA2203819	GCA_900044845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/845/GCA_900044845.1_11658_2_93	-	2245STDY5608958
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70085	52.1	-	MZUS01	34	4820	4563	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074121	GCA_002041205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/205/GCA_002041205.1_ASM204120v1	28705959	CFSAN057803
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.80523	32.9	-	CTYQ01	509	2941	2712	3/31/15	4/21/17	Scaffold	SC	SAMEA862603	GCA_001235485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/485/GCA_001235485.1_5295_1_6	-	MU9
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.78741	32.7	-	CTSB01	58	2875	2741	3/31/15	3/5/17	Scaffold	SC	SAMEA734734	GCA_001235525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/525/GCA_001235525.1_4351_3_7	-	08-01670
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.6945	52.1	-	MZUU01	43	4801	4564	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074119	GCA_002041215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/215/GCA_002041215.1_ASM204121v1	28705959	CFSAN057805
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.18307	39.6	-	FFTP01	79	2430	2170	2/10/16	3/13/17	Scaffold	SC	SAMEA2203858	GCA_900044855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/855/GCA_900044855.1_11679_1_29	-	2245STDY5608998
Escherichia coli	562	PRJEB12203	338936	Proteobacteria	Gammaproteobacteria	4.95867	50.6	-	FBVE01	315	5251	4847	8/15/16	2/25/17	Scaffold	ISTITUTO SUPERIORE DI SANITA	SAMEA3715971	GCA_900016015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/015/GCA_900016015.1_BCW5746_contigs	-	BCW5746
Escherichia coli	562	PRJEB12203	338936	Proteobacteria	Gammaproteobacteria	4.92756	50.6	-	FBUR01	322	5201	4817	8/15/16	2/25/17	Scaffold	ISTITUTO SUPERIORE DI SANITA	SAMEA3715973	GCA_900016025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/025/GCA_900016025.1_BCW5739_contigs	-	BCW5739
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99087	39.8	-	FFTQ01	44	2193	1935	2/10/16	3/18/17	Scaffold	SC	SAMEA2203859	GCA_900044865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/865/GCA_900044865.1_11511_8_24	-	2245STDY5608999
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70339	52.1	-	MZUX01	28	4815	4571	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074116	GCA_002041245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/245/GCA_002041245.1_ASM204124v1	28705959	CFSAN057808
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.74859	32.7	-	CTSZ01	49	2801	2685	3/31/15	3/5/17	Scaffold	SC	SAMEA734676	GCA_001235725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/725/GCA_001235725.1_4351_1_10	-	98-24344
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.77764	32.7	-	CTUF01	54	2851	2742	3/31/15	3/5/17	Scaffold	SC	SAMEA734770	GCA_001235785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/785/GCA_001235785.1_4351_8_8	-	07-02995
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.7002	52.1	-	MZUZ01	34	4803	4563	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074114	GCA_002041265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/265/GCA_002041265.1_ASM204126v1	28705959	CFSAN057810
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99319	39.8	-	FFTR01	40	2201	1931	2/10/16	3/15/17	Scaffold	SC	SAMEA2203860	GCA_900044875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/875/GCA_900044875.1_11511_8_25	-	2245STDY5609000
Escherichia coli	562	PRJEB12203	338936	Proteobacteria	Gammaproteobacteria	4.96755	50.6	-	FBUP01	406	5250	4842	8/15/16	2/25/17	Scaffold	ISTITUTO SUPERIORE DI SANITA	SAMEA3715972	GCA_900016045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/045/GCA_900016045.1_BCW5743_contigs	-	BCW5743
Escherichia coli	562	PRJEB12203	338936	Proteobacteria	Gammaproteobacteria	5.04812	50.6	-	FBVB01	447	5340	4943	8/15/16	2/25/17	Scaffold	ISTITUTO SUPERIORE DI SANITA	SAMEA3715974	GCA_900016055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/055/GCA_900016055.1_BCW5717_contigs	-	BCW5717
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.23825	41.8	-	FDTY01	425	2312	2043	2/9/16	3/13/17	Scaffold	SC	SAMEA2239235	GCA_900045385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/385/GCA_900045385.1_11861_5_7	-	2842STDY5644618
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69932	52.1	-	MZVA01	35	4804	4562	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074113	GCA_002041275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/275/GCA_002041275.1_ASM204127v1	28705959	CFSAN057811
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.77906	33.1	-	CTSL01	216	2825	2608	3/31/15	4/21/17	Scaffold	SC	SAMEA734755	GCA_001235875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/875/GCA_001235875.1_4351_2_6	-	09-00983
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.80147	32.7	-	CUBP01	23	2894	2749	3/31/15	3/5/17	Scaffold	SC	SAMEA1030264	GCA_001236005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/005/GCA_001236005.1_6437_8_14	-	A09973/ 97
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70369	52.1	-	MZUY01	32	4802	4564	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074115	GCA_002041305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/305/GCA_002041305.1_ASM204130v1	28705959	CFSAN057809
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.96606	39.9	-	FFQM01	45	2170	1906	2/9/16	3/13/17	Scaffold	SC	SAMEA2203759	GCA_900045485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/485/GCA_900045485.1_11657_8_3	-	2245STDY5608898
Escherichia coli	562	PRJEB12592	324040	Proteobacteria	Gammaproteobacteria	4.90075	50.6	-	FCPE01	152	5124	4743	6/1/16	2/25/17	Scaffold	Centre for Food Safety	SAMEA3861670	GCA_900039535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/535/GCA_900039535.1_F13P5	-	-
Escherichia coli	562	PRJEB12593	324039	Proteobacteria	Gammaproteobacteria	4.90874	50.7	-	FCPA01	133	5145	4826	6/1/16	2/25/17	Scaffold	Centre for Food Safety	SAMEA3861671	GCA_900039545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/545/GCA_900039545.1_F25OS1	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02036	39.7	-	FDSC01	18	2235	2006	2/9/16	3/13/17	Scaffold	SC	SAMEA2239140	GCA_900046495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/495/GCA_900046495.1_11860_8_5	-	2842STDY5644522
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69251	52.1	-	MZVI01	33	4790	4551	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074159	GCA_002041325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/325/GCA_002041325.1_ASM204132v1	28705959	CFSAN057819
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.86958	32.7	-	CTWI01	79	3032	2866	3/31/15	3/5/17	Scaffold	SC	SAMEA862632	GCA_001236045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/045/GCA_001236045.1_5083_6_5	-	HU17
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.77148	32.7	-	CTVG01	48	2863	2727	3/31/15	3/5/17	Scaffold	SC	SAMEA734706	GCA_001236185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/185/GCA_001236185.1_4395_7_3	-	06-01396
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69936	52.1	-	MZVC01	37	4804	4559	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074111	GCA_002041345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/345/GCA_002041345.1_ASM204134v1	28705959	CFSAN057813
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12811	39.6	-	FDQO01	38	2366	2117	2/9/16	3/13/17	Scaffold	SC	SAMEA2239127	GCA_900046505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/505/GCA_900046505.1_11860_7_88	-	2842STDY5644508
Escherichia coli	562	PRJEB12588	324044	Proteobacteria	Gammaproteobacteria	5.05036	50.6	-	FCOZ01	81	5180	4886	6/1/16	2/25/17	Scaffold	Centre for Food Safety	SAMEA3861666	GCA_900042775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/775/GCA_900042775.1_F1B2	-	-
Escherichia coli	562	PRJEB12590	324043	Proteobacteria	Gammaproteobacteria	5.24489	50.7	-	FCPB01	88	5543	5159	6/1/16	2/25/17	Scaffold	Centre for Food Safety	SAMEA3861668	GCA_900042785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/785/GCA_900042785.1_F1L4	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13474	39.6	-	FDQN01	39	2377	2121	2/9/16	3/13/17	Scaffold	SC	SAMEA2239153	GCA_900046515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/515/GCA_900046515.1_11860_8_19	-	2842STDY5644535
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70401	52.1	-	MZVF01	37	4812	4573	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074162	GCA_002041365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/365/GCA_002041365.1_ASM204136v1	28705959	CFSAN057816
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.88625	32.7	-	CTZK01	77	3055	2901	3/31/15	3/5/17	Scaffold	SC	SAMEA862623	GCA_001236265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/265/GCA_001236265.1_5364_6_7	-	HU7
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.91888	32.7	-	CTZT01	41	3026	2871	3/31/15	3/5/17	Scaffold	SC	SAMEA1030176	GCA_001236285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/285/GCA_001236285.1_6401_6_17	-	921.07
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73539	52	-	MZVH01	39	4860	4610	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074160	GCA_002041375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/375/GCA_002041375.1_ASM204137v1	28705959	CFSAN057818
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11501	39.5	-	FDSH01	55	2340	2088	2/9/16	3/13/17	Scaffold	SC	SAMEA2239180	GCA_900046525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/525/GCA_900046525.1_11860_8_48	-	2842STDY5644562
Escherichia coli	562	PRJEB12589	324045	Proteobacteria	Gammaproteobacteria	5.25276	50.7	-	FCPC01	94	5555	5168	6/1/16	2/25/17	Scaffold	Centre for Food Safety	SAMEA3861667	GCA_900042795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/795/GCA_900042795.1_F1L3	-	-
Escherichia coli	562	PRJEB12594	324041	Proteobacteria	Gammaproteobacteria	4.99587	50.7	-	FCPF01	145	5183	4852	6/1/16	2/25/17	Scaffold	Centre for Food Safety	SAMEA3861672	GCA_900044035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/035/GCA_900044035.1_F25P5	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12135	39.6	-	FDSN01	63	2374	2112	2/9/16	3/13/17	Scaffold	SC	SAMEA2239188	GCA_900046535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/535/GCA_900046535.1_11860_8_56	-	2842STDY5644570
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69417	52.1	-	MZVL01	35	4795	4549	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074155	GCA_002041385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/385/GCA_002041385.1_ASM204138v1	28705959	CFSAN057823
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.74214	32.9	-	CTTR01	90	2837	2583	3/31/15	3/5/17	Scaffold	SC	SAMEA734761	GCA_001236405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/405/GCA_001236405.1_4351_7_4	-	07-03341
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.7682	32.7	-	CTVS01	44	2867	2720	3/31/15	4/21/17	Scaffold	SC	SAMEA734731	GCA_001236465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/465/GCA_001236465.1_4395_8_4	-	04-00608
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.72407	52.2	-	MZVM01	39	4826	4543	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074153	GCA_002041425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/425/GCA_002041425.1_ASM204142v1	28705959	CFSAN057825
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.03512	39.6	-	FDTT01	23	2250	2023	2/9/16	3/13/17	Scaffold	SC	SAMEA2239231	GCA_900046545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/545/GCA_900046545.1_11861_5_3	-	2842STDY5644614
Escherichia coli	562	PRJEB12591	324042	Proteobacteria	Gammaproteobacteria	4.87906	50.6	-	FCPD01	147	5074	4726	6/1/16	2/25/17	Scaffold	Centre for Food Safety	SAMEA3861669	GCA_900044045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/045/GCA_900044045.1_F13P4	-	-
Escherichia coli	562	PRJEB11403	309260	Proteobacteria	Gammaproteobacteria	5.27256	57.5	-	FLXF01	30	5280	5067	9/24/16	2/25/17	Scaffold	SC	SAMEA3531867	GCA_900092915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/092/915/GCA_900092915.1_18090_8_32	-	F1-8-ERB4
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12787	39.6	-	FDUE01	47	2368	2122	2/9/16	3/13/17	Scaffold	SC	SAMEA2239244	GCA_900046555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/555/GCA_900046555.1_11861_5_17	-	2842STDY5644627
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69233	52.1	-	MZVP01	33	4791	4550	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074150	GCA_002041445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/445/GCA_002041445.1_ASM204144v1	28705959	CFSAN057828
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.80717	32.7	-	CTTP01	67	2906	2756	3/31/15	4/21/17	Scaffold	SC	SAMEA734742	GCA_001236485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/485/GCA_001236485.1_4351_7_1	-	07-03349
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.88395	32.7	-	CUBU01	37	3023	2851	3/31/15	3/5/17	Scaffold	SC	SAMEA1030202	GCA_001236565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/565/GCA_001236565.1_6437_8_18	-	ARI10
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69647	52.1	-	MZVO01	39	4811	4558	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074151	GCA_002041455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/455/GCA_002041455.1_ASM204145v1	28705959	CFSAN057827
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13166	39.6	-	FDUN01	49	2392	2129	2/9/16	3/13/17	Scaffold	SC	SAMEA2239265	GCA_900046565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/565/GCA_900046565.1_11861_5_39	-	2842STDY5644648
Escherichia coli	562	PRJEB14873	355675	Proteobacteria	Gammaproteobacteria	5.21263	50.4	-	FLYZ01	328	5438	5002	12/2/16	2/26/17	Scaffold	academisch medisch centrum	SAMEA4350779	GCA_900093825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/825/GCA_900093825.1_scaffolds_20160015	-	-
Escherichia coli	562	PRJEB14873	355675	Proteobacteria	Gammaproteobacteria	5.2231	50.5	-	FLZB01	515	5464	5112	12/2/16	2/26/17	Scaffold	academisch medisch centrum	SAMEA4350774	GCA_900093835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/835/GCA_900093835.1_scaffolds_20151360	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.0545	39.6	-	FDVQ01	27	2258	2031	2/9/16	3/13/17	Scaffold	SC	SAMEA2238287	GCA_900046575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/575/GCA_900046575.1_11860_4_12	-	2842STDY5643656
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.64702	52.1	-	MZVQ01	33	4754	4497	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074149	GCA_002041465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/465/GCA_002041465.1_ASM204146v1	28705959	CFSAN057829
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.71682	32.7	-	CTSR01	44	2777	2654	3/31/15	3/5/17	Scaffold	SC	SAMEA734795	GCA_001236585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/585/GCA_001236585.1_4351_5_8	-	08-01489
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.80275	32.7	-	CTTI01	115	2882	2745	3/31/15	4/21/17	Scaffold	SC	SAMEA734733	GCA_001236825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/825/GCA_001236825.1_4351_3_6	-	08-01669
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.76436	52.1	-	MZVU01	49	4906	4644	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074145	GCA_002041505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/505/GCA_002041505.1_ASM204150v1	28705959	CFSAN057833
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99318	39.8	-	FDVT01	51	2203	1934	2/9/16	3/6/17	Scaffold	SC	SAMEA2238291	GCA_900046585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/585/GCA_900046585.1_11860_4_16	-	2842STDY5643660
Escherichia coli	562	PRJEB14873	355675	Proteobacteria	Gammaproteobacteria	5.08756	50.5	-	FLZA01	285	5319	4939	12/2/16	2/26/17	Scaffold	academisch medisch centrum	SAMEA4350785	GCA_900093845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/845/GCA_900093845.1_scaffolds_20160103	-	-
Escherichia coli	562	PRJEB14873	355675	Proteobacteria	Gammaproteobacteria	5.24265	50.5	-	FLZE01	311	5377	4991	12/2/16	2/26/17	Scaffold	academisch medisch centrum	SAMEA4350777	GCA_900093855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/855/GCA_900093855.1_scaffolds_20160007	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.02445	39.7	-	FDVR01	44	2224	1962	2/9/16	3/13/17	Scaffold	SC	SAMEA2238288	GCA_900046595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/595/GCA_900046595.1_11860_4_13	-	2842STDY5643657
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69287	52.1	-	MZVV01	39	4799	4555	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074143	GCA_002041525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/525/GCA_002041525.1_ASM204152v1	28705959	CFSAN057835
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.77433	32.8	-	CTTG01	80	2854	2686	3/31/15	4/21/17	Scaffold	SC	SAMEA734760	GCA_001236925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/925/GCA_001236925.1_4351_2_9	-	08-01674
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.77007	32.7	-	CTUA01	34	2866	2734	3/31/15	3/5/17	Scaffold	SC	SAMEA734788	GCA_001236985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/236/985/GCA_001236985.1_4351_8_7	-	07-02994
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74139	52.1	-	MZVX01	34	4861	4618	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074141	GCA_002041535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/535/GCA_002041535.1_ASM204153v1	28705959	CFSAN057837
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98837	39.8	-	FDWQ01	50	2193	1924	2/9/16	3/8/17	Scaffold	SC	SAMEA2238333	GCA_900046605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/605/GCA_900046605.1_11860_4_60	-	2842STDY5643702
Escherichia coli	562	PRJEB14873	355675	Proteobacteria	Gammaproteobacteria	4.98033	50.7	-	FLZF01	460	5188	4763	12/2/16	2/26/17	Scaffold	academisch medisch centrum	SAMEA4350787	GCA_900093865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/865/GCA_900093865.1_scaffolds_C318	-	-
Escherichia coli	562	PRJEB14873	355675	Proteobacteria	Gammaproteobacteria	5.05592	50.4	-	FLYX01	236	5359	4907	12/2/16	2/26/17	Scaffold	academisch medisch centrum	SAMEA4350789	GCA_900093875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/875/GCA_900093875.1_scaffolds_C333	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01392	39.7	-	FDXW01	29	2228	2006	2/9/16	3/13/17	Scaffold	SC	SAMEA2238381	GCA_900046615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/615/GCA_900046615.1_11860_5_12	-	2842STDY5643751
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69336	52.1	-	MZWA01	36	4794	4557	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074138	GCA_002041545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/545/GCA_002041545.1_ASM204154v1	28705959	CFSAN057840
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.79866	32.9	-	CTSG01	103	2853	2668	3/31/15	4/21/17	Scaffold	SC	SAMEA734758	GCA_001237225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/225/GCA_001237225.1_4351_2_1	-	09-01243
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.81313	32.7	-	CTVR01	46	2908	2776	3/31/15	3/5/17	Scaffold	SC	SAMEA734682	GCA_001237245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/245/GCA_001237245.1_4395_8_3	-	03-01478
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.74976	52.1	-	MZVY01	45	4875	4624	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074140	GCA_002041575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/575/GCA_002041575.1_ASM204157v1	28705959	CFSAN057838
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11115	39.5	-	FDYF01	44	2353	2075	2/9/16	3/6/17	Scaffold	SC	SAMEA2238400	GCA_900046625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/625/GCA_900046625.1_11860_5_30	-	2842STDY5643770
Escherichia coli	562	PRJEB14873	355675	Proteobacteria	Gammaproteobacteria	5.2086	50.5	-	FLYT01	469	5452	5106	12/2/16	2/26/17	Scaffold	academisch medisch centrum	SAMEA4350773	GCA_900093885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/885/GCA_900093885.1_scaffolds_20151359	-	-
Escherichia coli	562	PRJEB14873	355675	Proteobacteria	Gammaproteobacteria	5.11302	50.5	-	FLZD01	399	5315	4916	12/2/16	2/26/17	Scaffold	academisch medisch centrum	SAMEA4350786	GCA_900093895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/895/GCA_900093895.1_scaffolds_C281	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.18051	39.6	-	FDYO01	52	2399	2155	2/9/16	3/13/17	Scaffold	SC	SAMEA2238417	GCA_900046635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/635/GCA_900046635.1_11860_5_48	-	2842STDY5643787
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69614	52.1	-	MZWB01	35	4790	4551	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074191	GCA_002041605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/605/GCA_002041605.1_ASM204160v1	28705959	CFSAN057841
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.7082	32.7	-	CTST01	77	2756	2615	3/31/15	4/21/17	Scaffold	SC	SAMEA734753	GCA_001237445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/445/GCA_001237445.1_4351_2_8	-	09-00985
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	3.01767	32.6	-	CTWZ01	99	3183	3046	3/31/15	3/5/17	Scaffold	SC	SAMEA862607	GCA_001237525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/525/GCA_001237525.1_5119_1_7	-	MAL9
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69367	52.1	-	MZWC01	41	4797	4554	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074190	GCA_002041615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/615/GCA_002041615.1_ASM204161v1	28705959	CFSAN057842
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11318	39.6	-	FDYY01	56	2318	2056	2/9/16	3/13/17	Scaffold	SC	SAMEA2238427	GCA_900046645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/645/GCA_900046645.1_11860_5_58	-	2842STDY5643797
Escherichia coli	562	PRJEB14873	355675	Proteobacteria	Gammaproteobacteria	5.30258	50.3	-	FLZH01	496	5345	4984	12/2/16	2/26/17	Scaffold	academisch medisch centrum	SAMEA4350788	GCA_900093905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/905/GCA_900093905.1_scaffolds_C322	-	-
Escherichia coli	562	PRJEB14873	355675	Proteobacteria	Gammaproteobacteria	5.55493	50.3	-	FLZG01	322	5753	5311	12/2/16	2/26/17	Scaffold	academisch medisch centrum	SAMEA4350784	GCA_900093915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/915/GCA_900093915.1_scaffolds_20160020	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05367	39.6	-	FDZP01	46	2249	1984	2/9/16	3/6/17	Scaffold	SC	SAMEA2238460	GCA_900046655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/655/GCA_900046655.1_11860_5_90	-	2842STDY5643830
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.695	52.1	-	MZWD01	38	4798	4548	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074189	GCA_002041625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/625/GCA_002041625.1_ASM204162v1	28705959	CFSAN057843
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.68238	32.7	-	CTTD01	56	2757	2589	3/31/15	4/21/17	Scaffold	SC	SAMEA734739	GCA_001237625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/625/GCA_001237625.1_4351_6_5	-	07-03356
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.79403	32.7	-	CTRY01	52	2891	2726	3/31/15	4/21/17	Scaffold	SC	SAMEA734777	GCA_001237765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/765/GCA_001237765.1_4351_6_8	-	08-01304
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73736	52	-	MZWE01	36	4856	4614	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074188	GCA_002041665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/665/GCA_002041665.1_ASM204166v1	28705959	CFSAN057844
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12421	39.5	-	FDZQ01	37	2340	2107	2/9/16	3/8/17	Scaffold	SC	SAMEA2238462	GCA_900046665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/665/GCA_900046665.1_11860_5_92	-	2842STDY5643832
Escherichia coli	562	PRJEB14873	355675	Proteobacteria	Gammaproteobacteria	5.10256	50.6	-	FLZC01	308	5326	4964	12/2/16	2/26/17	Scaffold	academisch medisch centrum	SAMEA4350775	GCA_900093925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/925/GCA_900093925.1_scaffolds_20151473	-	-
Escherichia coli	562	PRJEB14873	355675	Proteobacteria	Gammaproteobacteria	5.55037	50.1	-	FLZL01	1111	5636	5236	12/2/16	2/26/17	Scaffold	academisch medisch centrum	SAMEA4350772	GCA_900093945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/945/GCA_900093945.1_scaffolds_20151316	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.14496	39.6	-	FDZS01	44	2382	2126	2/9/16	3/13/17	Scaffold	SC	SAMEA2238471	GCA_900046675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/675/GCA_900046675.1_11860_6_5	-	2842STDY5643842
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70206	52.1	-	MZWG01	35	4810	4560	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074186	GCA_002041685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/685/GCA_002041685.1_ASM204168v1	28705959	CFSAN057846
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.79488	32.7	-	CTUZ01	42	2897	2748	3/31/15	3/5/17	Scaffold	SC	SAMEA734704	GCA_001237825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/825/GCA_001237825.1_4395_6_7	-	07-00064
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	3.02263	32.6	-	CTXH01	175	3188	3021	3/31/15	3/5/17	Scaffold	SC	SAMEA862562	GCA_001237845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/845/GCA_001237845.1_5139_6_8	-	D71
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.7356	52	-	MZWF01	32	4853	4609	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074187	GCA_002041695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/695/GCA_002041695.1_ASM204169v1	28705959	CFSAN057845
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1097	39.6	-	FEAS01	33	2318	2091	2/9/16	3/13/17	Scaffold	SC	SAMEA2238508	GCA_900046685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/685/GCA_900046685.1_11860_6_42	-	2842STDY5643879
Escherichia coli	562	PRJEB14873	355675	Proteobacteria	Gammaproteobacteria	5.03674	50.5	-	FLYR01	169	5250	4947	12/2/16	2/26/17	Scaffold	academisch medisch centrum	SAMEA4350780	GCA_900093955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/955/GCA_900093955.1_scaffolds_20160016	-	-
Escherichia coli	562	PRJEB14873	355675	Proteobacteria	Gammaproteobacteria	4.82961	50.8	-	FLYW01	192	5007	4679	12/2/16	2/26/17	Scaffold	academisch medisch centrum	SAMEA4350778	GCA_900093965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/965/GCA_900093965.1_scaffolds_20160014	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04136	39.7	-	FEAW01	16	2249	2019	2/9/16	3/13/17	Scaffold	SC	SAMEA2238517	GCA_900046695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/695/GCA_900046695.1_11860_6_52	-	2842STDY5643888
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70281	52.1	-	MZWK01	35	4813	4563	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074182	GCA_002041705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/705/GCA_002041705.1_ASM204170v1	28705959	CFSAN057850
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.80247	32.7	-	CTVT01	54	2902	2762	3/31/15	4/21/17	Scaffold	SC	SAMEA734725	GCA_001237905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/905/GCA_001237905.1_4395_8_6	-	04-02314-1
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.80885	32.7	-	CTVK01	75	2913	2753	3/31/15	3/5/17	Scaffold	SC	SAMEA734715	GCA_001237945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/945/GCA_001237945.1_4395_7_6	-	06-01650
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70212	52.1	-	MZWI01	41	4815	4572	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074184	GCA_002041745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/745/GCA_002041745.1_ASM204174v1	28705959	CFSAN057848
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04938	39.6	-	FEBW01	28	2240	2010	2/9/16	3/13/17	Scaffold	SC	SAMEA2238561	GCA_900046705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/705/GCA_900046705.1_11860_6_95	-	2842STDY5643932
Escherichia coli	562	PRJEB14873	355675	Proteobacteria	Gammaproteobacteria	5.03108	50.4	-	FLYU01	267	5233	4797	12/2/16	2/26/17	Scaffold	academisch medisch centrum	SAMEA4350782	GCA_900093975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/975/GCA_900093975.1_scaffolds_20160018	-	-
Escherichia coli	562	PRJEB14873	355675	Proteobacteria	Gammaproteobacteria	4.83508	50.7	-	FLYV01	244	5167	4653	12/2/16	2/26/17	Scaffold	academisch medisch centrum	SAMEA4350781	GCA_900093985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/985/GCA_900093985.1_scaffolds_20160017	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98903	39.8	-	FEBX01	45	2194	1937	2/9/16	3/13/17	Scaffold	SC	SAMEA2238562	GCA_900046715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/715/GCA_900046715.1_11860_6_96	-	2842STDY5643934
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73631	52	-	MZWO01	36	4860	4616	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074178	GCA_002041755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/755/GCA_002041755.1_ASM204175v1	28705959	CFSAN057854
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.82817	32.7	-	CTZU01	23	2927	2776	3/31/15	3/5/17	Scaffold	SC	SAMEA1030334	GCA_001238005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/005/GCA_001238005.1_6401_6_21	-	403.02
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.77336	32.7	-	CTUD01	50	2849	2735	3/31/15	3/5/17	Scaffold	SC	SAMEA734766	GCA_001238025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/025/GCA_001238025.1_4351_8_10	-	07-02996
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73744	52	-	MZWM01	44	4855	4614	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074180	GCA_002041765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/765/GCA_002041765.1_ASM204176v1	28705959	CFSAN057852
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12808	39.7	-	FEJX01	50	2356	2114	2/9/16	3/13/17	Scaffold	SC	SAMEA2383157	GCA_900046725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/725/GCA_900046725.1_12754_3_42	-	2842STDY5753703
Escherichia coli	562	PRJEB14873	355675	Proteobacteria	Gammaproteobacteria	5.0419	50.4	-	FLZJ01	553	5180	4780	12/2/16	2/26/17	Scaffold	academisch medisch centrum	SAMEA4350783	GCA_900093995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/995/GCA_900093995.1_scaffolds_20160019	-	-
Escherichia coli	562	PRJEB14873	355675	Proteobacteria	Gammaproteobacteria	5.05596	50.6	-	FLYS01	314	5206	4857	12/2/16	2/26/17	Scaffold	academisch medisch centrum	SAMEA4350776	GCA_900094005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/005/GCA_900094005.1_scaffolds_20160006	-	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.98788	39.8	-	FFRV01	49	2185	1926	2/10/16	3/12/17	Scaffold	SC	SAMEA2203801	GCA_900046815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/815/GCA_900046815.1_11658_8_2	-	2245STDY5608940
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.85578	52.1	-	MZWQ01	40	5015	4754	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074174	GCA_002041775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/775/GCA_002041775.1_ASM204177v1	28705959	CFSAN057858
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.78097	32.7	-	CTVW01	36	2871	2748	3/31/15	3/5/17	Scaffold	SC	SAMEA734727	GCA_001238145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/145/GCA_001238145.1_4395_8_8	-	04-03100
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.79716	32.7	-	CUBM01	27	2917	2753	3/31/15	3/5/17	Scaffold	SC	SAMEA1030282	GCA_001239005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/005/GCA_001239005.1_6401_7_7	-	90/10685
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70056	52.1	-	MZWR01	39	4809	4557	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074173	GCA_002041825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/825/GCA_002041825.1_ASM204182v1	28705959	CFSAN057859
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.03077	39.6	-	FFUG01	27	2229	2002	2/10/16	3/15/17	Scaffold	SC	SAMEA2203878	GCA_900046825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/825/GCA_900046825.1_11511_8_29	-	2245STDY5609018
Escherichia coli	562	PRJEB14873	355675	Proteobacteria	Gammaproteobacteria	5.45444	50.2	-	FLZM01	1125	5673	5248	12/2/16	2/26/17	Scaffold	academisch medisch centrum	SAMEA4350769	GCA_900094015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/015/GCA_900094015.1_scaffolds_20151012	-	-
Escherichia coli	562	PRJEB14873	355675	Proteobacteria	Gammaproteobacteria	4.97967	50.3	-	FLYY01	251	5175	4778	12/2/16	2/26/17	Scaffold	academisch medisch centrum	SAMEA4350790	GCA_900094025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/025/GCA_900094025.1_scaffolds_C413	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01079	39.8	-	FDSE01	32	2240	2006	2/9/16	3/5/17	Scaffold	SC	SAMEA2239128	GCA_900046905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/905/GCA_900046905.1_11860_7_89	-	2842STDY5644510
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70566	52.1	-	MZWU01	36	4815	4569	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074170	GCA_002041835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/835/GCA_002041835.1_ASM204183v1	28705959	CFSAN057862
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.80282	32.7	-	CTZN01	35	2930	2749	3/31/15	3/5/17	Scaffold	SC	SAMEA1030252	GCA_001239145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/145/GCA_001239145.1_6401_6_10	-	M665 56
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.81136	32.6	-	CTVC01	42	2905	2775	3/31/15	3/5/17	Scaffold	SC	SAMEA734701	GCA_001239165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/165/GCA_001239165.1_4395_6_8	-	07-00309
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73665	52	-	MZWS01	39	4854	4615	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074172	GCA_002041845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/845/GCA_002041845.1_ASM204184v1	28705959	CFSAN057860
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10311	39.6	-	FDSJ01	49	2318	2062	2/9/16	3/13/17	Scaffold	SC	SAMEA2239182	GCA_900046915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/915/GCA_900046915.1_11860_8_50	-	2842STDY5644564
Escherichia coli	562	PRJEB16952	351077	Proteobacteria	Gammaproteobacteria	4.87844	50.7	-	FOEU01	78	5091	4720	10/29/16	2/25/17	Scaffold	DOE - JOINT GENOME INSTITUTE	SAMN04487822	GCA_900110665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/110/665/GCA_900110665.1_IMG-taxon_2608642106_annotated_assembly	-	PA-3
Escherichia coli	562	PRJEB15588	357209	Proteobacteria	Gammaproteobacteria	5.12892	50.8	-	FUVI01	165	5336	5022	2/17/17	2/23/17	Scaffold	Kalmar county hospital	SAMEA4483467	GCA_900166685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/685/GCA_900166685.1_Isolate_2	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06206	39.7	-	FDUY01	49	2270	2013	2/9/16	3/13/17	Scaffold	SC	SAMEA2239287	GCA_900046925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/925/GCA_900046925.1_11861_5_62	-	2842STDY5644671
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69149	52.1	-	MZWW01	39	4794	4551	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074168	GCA_002041885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/885/GCA_002041885.1_ASM204188v1	28705959	CFSAN057864
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.87887	32.7	-	CTYA01	92	3052	2913	3/31/15	3/5/17	Scaffold	SC	SAMEA862593	GCA_001239185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/185/GCA_001239185.1_5197_1_9	-	LIT76
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.85086	32.7	-	CTZM01	72	2979	2838	3/31/15	3/5/17	Scaffold	SC	SAMEA862627	GCA_001239245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/245/GCA_001239245.1_5364_6_9	-	HU9
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.68887	52.1	-	MZWY01	40	4789	4549	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074216	GCA_002041905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/905/GCA_002041905.1_ASM204190v1	28705959	CFSAN057867
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08171	39.7	-	FDXE01	34	2307	2056	2/9/16	3/13/17	Scaffold	SC	SAMEA2238357	GCA_900046935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/935/GCA_900046935.1_11860_4_84	-	2842STDY5643726
Escherichia coli	562	PRJEB15588	357209	Proteobacteria	Gammaproteobacteria	5.18892	50.8	-	FUVK01	262	5412	5083	2/17/17	2/23/17	Scaffold	Kalmar county hospital	SAMEA4483468	GCA_900166695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/695/GCA_900166695.1_Isolate_3	-	-
Escherichia coli	562	PRJEB15588	357209	Proteobacteria	Gammaproteobacteria	5.12843	50.7	-	FUVL01	139	5370	5023	2/17/17	2/23/17	Scaffold	Kalmar county hospital	SAMEA4483553	GCA_900166705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/705/GCA_900166705.1_Isolate_13	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05533	39.6	-	FDXO01	31	2259	2024	2/9/16	3/13/17	Scaffold	SC	SAMEA2238369	GCA_900046945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/945/GCA_900046945.1_11860_4_95	-	2842STDY5643738
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70069	52.1	-	MZWZ01	38	4815	4566	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074215	GCA_002041925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/925/GCA_002041925.1_ASM204192v1	28705959	CFSAN057868
Staphylococcus aureus	1280	PRJEB2510	204283	Terrabacteria group	Firmicutes	2.82473	32.7	-	CUAE01	31	2927	2776	3/31/15	3/5/17	Scaffold	SC	SAMEA1030204	GCA_001239405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/405/GCA_001239405.1_6401_6_15	-	370.07
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	3.01259	32.6	-	CTWW01	184	3212	3029	3/31/15	3/5/17	Scaffold	SC	SAMEA862528	GCA_001239465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/465/GCA_001239465.1_5139_6_11	-	H211
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69852	52.1	-	MZXB01	38	4807	4559	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074213	GCA_002041935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/935/GCA_002041935.1_ASM204193v1	28705959	CFSAN057870
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00464	39.7	-	FDZE01	21	2195	1961	2/9/16	3/13/17	Scaffold	SC	SAMEA2238438	GCA_900046955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/955/GCA_900046955.1_11860_5_69	-	2842STDY5643808
Escherichia coli	562	PRJEB15588	357209	Proteobacteria	Gammaproteobacteria	5.54376	51.3	-	FUVV01	1285	5515	5166	2/17/17	2/23/17	Scaffold	Kalmar county hospital	SAMEA4483551	GCA_900166735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/735/GCA_900166735.1_Isolate_11	-	-
Escherichia coli	562	PRJEB15588	357209	Proteobacteria	Gammaproteobacteria	5.97875	50.5	-	FUVU01	1253	5929	5462	2/17/17	2/23/17	Scaffold	Kalmar county hospital	SAMEA4483557	GCA_900166755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/755/GCA_900166755.1_Isolate_17	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01476	39.8	-	FEAK01	26	2256	2014	2/9/16	3/12/17	Scaffold	SC	SAMEA2238497	GCA_900046965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/965/GCA_900046965.1_11860_6_30	-	2842STDY5643868
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69467	52.1	-	MZXC01	27	4791	4552	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074211	GCA_002041945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/945/GCA_002041945.1_ASM204194v1	28705959	CFSAN057872
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.79509	32.7	-	CTUU01	40	2890	2755	3/31/15	3/5/17	Scaffold	SC	SAMEA734700	GCA_001239525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/525/GCA_001239525.1_4395_6_3	-	07-00060
Staphylococcus aureus	1280	PRJEB2096	203725	Terrabacteria group	Firmicutes	2.7959	32.7	-	CTUT01	38	2895	2754	3/31/15	4/21/17	Scaffold	SC	SAMEA734699	GCA_001239545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/545/GCA_001239545.1_4395_6_2	-	07-00059
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.737	52	-	MZXD01	42	4859	4614	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074210	GCA_002041955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/041/955/GCA_002041955.1_ASM204195v1	28705959	CFSAN057873
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98075	39.7	-	FEAL01	22	2173	1952	2/9/16	3/13/17	Scaffold	SC	SAMEA2238499	GCA_900046975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/975/GCA_900046975.1_11860_6_33	-	2842STDY5643870
Escherichia coli	562	PRJEB15588	357209	Proteobacteria	Gammaproteobacteria	5.04662	50.8	-	FUVH01	112	5257	4935	2/17/17	2/23/17	Scaffold	Kalmar county hospital	SAMEA4483548	GCA_900166765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/765/GCA_900166765.1_Isolate_8	-	-
Escherichia coli	562	PRJEB15588	357209	Proteobacteria	Gammaproteobacteria	5.19222	50.8	-	FUVP01	250	5426	5084	2/17/17	2/23/17	Scaffold	Kalmar county hospital	SAMEA4483469	GCA_900166785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/785/GCA_900166785.1_Isolate_4	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98789	39.8	-	FEBO01	49	2193	1929	2/9/16	3/13/17	Scaffold	SC	SAMEA2238550	GCA_900046985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/985/GCA_900046985.1_11860_6_84	-	2842STDY5643921
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70647	52.1	-	MZXF01	38	4809	4568	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074208	GCA_002042005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/005/GCA_002042005.1_ASM204200v1	28705959	CFSAN057875
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	2.99551	32.6	-	CTWV01	158	3179	3011	3/31/15	3/5/17	Scaffold	SC	SAMEA862609	GCA_001239705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/239/705/GCA_001239705.1_5119_1_5	-	MAL3
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88234	32.6	-	CSJM01	29	3027	2900	3/23/15	3/5/17	Scaffold	SC	SAMEA1324739	GCA_001262175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/175/GCA_001262175.1_7738_4_15	-	USFL297
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73818	52	-	MZXI01	37	4863	4610	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074201	GCA_002042015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/015/GCA_002042015.1_ASM204201v1	28705959	CFSAN057882
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12364	39.5	-	FECE01	61	2367	2077	2/9/16	3/13/17	Scaffold	SC	SAMEA2238576	GCA_900046995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/995/GCA_900046995.1_11861_1_14	-	2842STDY5643948
Escherichia coli	562	PRJEB15588	357209	Proteobacteria	Gammaproteobacteria	5.21968	50.8	-	FUVT01	367	5431	5083	2/17/17	2/23/17	Scaffold	Kalmar county hospital	SAMEA4483552	GCA_900166795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/795/GCA_900166795.1_Isolate_12	-	-
Escherichia coli	562	PRJEB15588	357209	Proteobacteria	Gammaproteobacteria	5.14791	50.8	-	FUVM01	235	5361	5034	2/17/17	2/23/17	Scaffold	Kalmar county hospital	SAMEA4483547	GCA_900166805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/805/GCA_900166805.1_Isolate_7	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.15253	39.7	-	FEEQ01	44	2374	2100	2/9/16	3/13/17	Scaffold	SC	SAMEA2238696	GCA_900047005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/005/GCA_900047005.1_11861_2_36	-	2842STDY5644069
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73884	52	-	MZXJ01	40	4855	4611	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074200	GCA_002042025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/025/GCA_002042025.1_ASM204202v1	28705959	CFSAN057883
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.85182	32.6	-	CSCD01	67	3019	2880	3/23/15	3/5/17	Scaffold	SC	SAMEA1710096	GCA_001262215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/262/215/GCA_001262215.1_9235_1_4	-	FL379
Staphylococcus aureus	1280	PRJNA291304	291304	Terrabacteria group	Firmicutes	2.73459	32.6	-	LGVN01	31	2863	2739	8/19/15	3/5/17	Scaffold	The University of Queensland	SAMN03938521	GCA_001270705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/270/705/GCA_001270705.1_ASM127070v1	26430027	ST8
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73628	52	-	MZXH01	32	4855	4610	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074202	GCA_002042065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/065/GCA_002042065.1_ASM204206v1	28705959	CFSAN057881
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.9844	39.8	-	FEET01	47	2209	1930	2/9/16	3/18/17	Scaffold	SC	SAMEA2239316	GCA_900047015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/015/GCA_900047015.1_11861_5_91	-	2842STDY5644700
Escherichia coli	562	PRJEB15588	357209	Proteobacteria	Gammaproteobacteria	5.0968	50.8	-	FUVJ01	128	5329	4999	2/17/17	2/23/17	Scaffold	Kalmar county hospital	SAMEA4483466	GCA_900166815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/815/GCA_900166815.1_Isolate_1	-	-
Escherichia coli	562	PRJEB15588	357209	Proteobacteria	Gammaproteobacteria	5.78926	51	-	FUVW01	1363	5804	5413	2/17/17	2/23/17	Scaffold	Kalmar county hospital	SAMEA4483558	GCA_900166825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/825/GCA_900166825.1_Isolate_18	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09918	39.6	-	FEEV01	36	2340	2100	2/9/16	3/13/17	Scaffold	SC	SAMEA2238704	GCA_900047025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/025/GCA_900047025.1_11861_2_44	-	2842STDY5644077
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.86349	52	-	MZXK01	34	5017	4767	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074199	GCA_002042075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/075/GCA_002042075.1_ASM204207v1	28705959	CFSAN057884
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.85563	32.7	-	CYJG01	19	2997	2871	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2236411	GCA_001287505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/505/GCA_001287505.1_11641_1_7	-	2588STDY5627524
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.92083	32.7	-	CYPK01	20	3092	2958	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384472	GCA_001287525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/525/GCA_001287525.1_12673_1_60	-	2588STDY5748538
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70273	52.1	-	MZXL01	41	4805	4561	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074198	GCA_002042105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/105/GCA_002042105.1_ASM204210v1	28705959	CFSAN057885
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06228	39.6	-	FCPW01	16	2269	2044	2/6/16	3/13/17	Scaffold	SC	SAMEA2238767	GCA_900047035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/035/GCA_900047035.1_11893_1_11	-	2842STDY5644141
Escherichia coli	562	PRJEB15588	357209	Proteobacteria	Gammaproteobacteria	5.15205	50.8	-	FUVN01	123	5404	5068	2/17/17	2/23/17	Scaffold	Kalmar county hospital	SAMEA4483546	GCA_900166835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/835/GCA_900166835.1_Isolate_6	-	-
Escherichia coli	562	PRJEB15588	357209	Proteobacteria	Gammaproteobacteria	5.06592	50.7	-	FUVS01	616	5246	4838	2/17/17	2/23/17	Scaffold	Kalmar county hospital	SAMEA4483559	GCA_900166845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/845/GCA_900166845.1_Isolate_21	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08034	39.6	-	FCPZ01	36	2276	2043	2/6/16	3/5/17	Scaffold	SC	SAMEA2238771	GCA_900047045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/045/GCA_900047045.1_11893_1_15	-	2842STDY5644145
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69868	52.1	-	MZXO01	46	4808	4563	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074193	GCA_002042115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/115/GCA_002042115.1_ASM204211v1	28705959	CFSAN057890
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.88084	32.7	-	CYKO01	22	3040	2912	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384061	GCA_001287545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/545/GCA_001287545.1_12625_6_29	-	2588STDY5748123
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87884	32.6	-	CYNO01	19	3020	2898	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384795	GCA_001287565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/565/GCA_001287565.1_12673_5_3	-	2588STDY5748861
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69945	52.1	-	MZUA01	30	4805	4567	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074080	GCA_002042145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/145/GCA_002042145.1_ASM204214v1	28705959	CFSAN057785
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.05683	39.5	-	FFRU01	42	2280	2031	2/10/16	3/6/17	Scaffold	SC	SAMEA2203803	GCA_900047145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/145/GCA_900047145.1_11657_4_11	-	2245STDY5608942
Escherichia coli	562	PRJEB15588	357209	Proteobacteria	Gammaproteobacteria	5.18586	50.8	-	FUVO01	275	5417	5086	2/17/17	2/23/17	Scaffold	Kalmar county hospital	SAMEA4483470	GCA_900166855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/855/GCA_900166855.1_Isolate_5	-	-
Escherichia coli	562	PRJEB15588	357209	Proteobacteria	Gammaproteobacteria	5.73461	51.5	-	FUVX01	1628	5637	5280	2/17/17	2/23/17	Scaffold	Kalmar county hospital	SAMEA4483555	GCA_900166865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/865/GCA_900166865.1_Isolate_15	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.03992	39.7	-	FDRG01	25	2245	2020	2/9/16	3/13/17	Scaffold	SC	SAMEA2239165	GCA_900047555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/555/GCA_900047555.1_11860_8_32	-	2842STDY5644547
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70259	52.1	-	MZTQ01	42	4806	4563	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074090	GCA_002042165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/165/GCA_002042165.1_ASM204216v1	28705959	CFSAN057775
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87888	32.6	-	CYNY01	20	3024	2892	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384846	GCA_001287585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/585/GCA_001287585.1_12673_5_54	-	2588STDY5748912
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.85757	32.7	-	CYKF01	14	3019	2889	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384017	GCA_001287605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/605/GCA_001287605.1_12625_5_80	-	2588STDY5748077
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70048	52.1	-	MZTR01	35	4800	4568	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074089	GCA_002042175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/175/GCA_002042175.1_ASM204217v1	28705959	CFSAN057776
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01458	39.8	-	FDSI01	27	2247	2002	2/9/16	3/6/17	Scaffold	SC	SAMEA2239181	GCA_900047565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/565/GCA_900047565.1_11860_8_49	-	2842STDY5644563
Escherichia coli	562	PRJEB20024	386786	Proteobacteria	Gammaproteobacteria	5.2179	50.5	-	FWDR01	325	5387	5031	5/16/17	8/7/17	Scaffold	Kalmar county hospital	SAMEA103915297	GCA_900169685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/685/GCA_900169685.1_15.TR.002_2OXA_OXA-48	-	-
Escherichia coli	562	PRJEB20024	386786	Proteobacteria	Gammaproteobacteria	5.19619	50.6	-	FWEQ01	337	5378	4994	5/16/17	8/7/17	Scaffold	Kalmar county hospital	SAMEA103915299	GCA_900169775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/775/GCA_900169775.1_15.TR.035_35OXA_OXA-48	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98557	39.7	-	FDSR01	33	2183	1962	2/9/16	3/13/17	Scaffold	SC	SAMEA2239192	GCA_900047575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/575/GCA_900047575.1_11860_8_60	-	2842STDY5644574
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70229	52.1	-	MZTZ01	35	4804	4563	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074081	GCA_002042185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/185/GCA_002042185.1_ASM204218v1	28705959	CFSAN057784
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.8835	32.6	-	CYMR01	20	3050	2897	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384638	GCA_001287625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/625/GCA_001287625.1_12673_3_36	-	2588STDY5748704
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.83789	32.6	-	CYLZ01	20	2955	2827	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384454	GCA_001287645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/645/GCA_001287645.1_12673_1_42	-	2588STDY5748520
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70165	52.1	-	MZUB01	39	4804	4567	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074079	GCA_002042225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/225/GCA_002042225.1_ASM204222v1	28705959	CFSAN057786
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07906	39.7	-	FDSM01	38	2301	2056	2/9/16	3/12/17	Scaffold	SC	SAMEA2239186	GCA_900047585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/585/GCA_900047585.1_11860_8_54	-	2842STDY5644568
Escherichia coli	562	PRJEB20024	386786	Proteobacteria	Gammaproteobacteria	4.85565	50.9	-	FWEG01	321	5068	4670	5/16/17	8/7/17	Scaffold	Kalmar county hospital	SAMEA103915295	GCA_900169845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/845/GCA_900169845.1_15.TR.020_20Carba_KPC	-	-
Escherichia coli	562	PRJEB20024	386786	Proteobacteria	Gammaproteobacteria	5.24767	50.6	-	FWDX01	345	5433	5053	5/16/17	8/7/17	Scaffold	Kalmar county hospital	SAMEA103915300	GCA_900169875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/875/GCA_900169875.1_15.TR.036_36OXA_OXA-48	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09393	39.6	-	FDUH01	32	2264	2052	2/9/16	3/6/17	Scaffold	SC	SAMEA2239254	GCA_900047595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/595/GCA_900047595.1_11861_5_27	-	2842STDY5644637
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69963	52.1	-	MZUH01	39	4798	4550	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074132	GCA_002042235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/235/GCA_002042235.1_ASM204223v1	28705959	CFSAN057792
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.82462	32.7	-	CYLR01	15	2992	2844	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384440	GCA_001287665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/665/GCA_001287665.1_12673_1_28	-	2588STDY5748506
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.78792	32.7	-	CYNN01	30	2922	2806	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384817	GCA_001287685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/685/GCA_001287685.1_12673_5_25	-	2588STDY5748883
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70373	52.1	-	MZUL01	36	4816	4566	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074128	GCA_002042245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/245/GCA_002042245.1_ASM204224v1	28705959	CFSAN057796
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99189	39.7	-	FDYK01	25	2197	1940	2/9/16	3/13/17	Scaffold	SC	SAMEA2238411	GCA_900047605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/605/GCA_900047605.1_11860_5_41	-	2842STDY5643781
Escherichia coli	562	PRJEB20024	386786	Proteobacteria	Gammaproteobacteria	5.18375	50.6	-	FWEF01	231	5369	5000	5/16/17	8/7/17	Scaffold	Kalmar county hospital	SAMEA103915296	GCA_900169935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/169/935/GCA_900169935.1_15.TR.020_20OXA_OXA-48	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.62352	50.1	-	FZGK01	613	-	-	9/7/17	9/7/17	Scaffold	Ausgem	SAMEA104140488	GCA_900195315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/315/GCA_900195315.1_F1_409D	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09892	39.6	-	FDYN01	41	2314	2061	2/9/16	3/13/17	Scaffold	SC	SAMEA2238416	GCA_900047615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/615/GCA_900047615.1_11860_5_47	-	2842STDY5643786
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70453	52.1	-	MZUT01	39	4812	4567	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074120	GCA_002042255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/255/GCA_002042255.1_ASM204225v1	28705959	CFSAN057804
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.89836	32.7	-	CYJT01	20	3053	2931	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2236453	GCA_001287705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/705/GCA_001287705.1_11641_1_52	-	2588STDY5627566
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.92839	32.7	-	CYIR01	46	3135	2968	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2236488	GCA_001287725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/725/GCA_001287725.1_11641_1_87	-	2588STDY5627601
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.7009	52.1	-	MZVB01	32	4814	4565	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074112	GCA_002042305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/305/GCA_002042305.1_ASM204230v1	28705959	CFSAN057812
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99954	39.6	-	FDZD01	25	2200	1975	2/9/16	3/5/17	Scaffold	SC	SAMEA2238437	GCA_900047625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/625/GCA_900047625.1_11860_5_68	-	2842STDY5643807
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.63509	50.3	-	FZFE01	210	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140480	GCA_900195355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/355/GCA_900195355.1_F1_403B	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.34737	50.2	-	FZGJ01	119	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140453	GCA_900195395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/395/GCA_900195395.1_F1_6F	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11655	39.6	-	FDZI01	38	2334	2081	2/9/16	3/13/17	Scaffold	SC	SAMEA2238444	GCA_900047635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/635/GCA_900047635.1_11860_5_74	-	2842STDY5643814
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.78331	52.1	-	MZVD01	48	4927	4668	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074110	GCA_002042315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/315/GCA_002042315.1_ASM204231v1	28705959	CFSAN057814
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.92237	32.7	-	CYPM01	18	3111	2956	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384578	GCA_001287745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/745/GCA_001287745.1_12673_2_71	-	2588STDY5748644
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.84519	32.6	-	CYME01	20	3010	2863	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384582	GCA_001287765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/765/GCA_001287765.1_12673_2_75	-	2588STDY5748648
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69909	52.1	-	MZVE01	29	4803	4564	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074109	GCA_002042325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/325/GCA_002042325.1_ASM204232v1	28705959	CFSAN057815
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.14925	39.5	-	FEAC01	44	2395	2131	2/9/16	3/13/17	Scaffold	SC	SAMEA2238485	GCA_900047645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/645/GCA_900047645.1_11860_6_18	-	2842STDY5643856
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.30409	50.6	-	FZFU01	692	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140450	GCA_900195405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/405/GCA_900195405.1_F1_4G	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.78862	50	-	FZFM01	298	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140489	GCA_900195445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/445/GCA_900195445.1_F1_409E	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.17301	39.6	-	FEBA01	38	2408	2156	2/9/16	3/13/17	Scaffold	SC	SAMEA2238525	GCA_900047655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/655/GCA_900047655.1_11860_6_59	-	2842STDY5643896
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69054	52.1	-	MZVN01	43	4796	4545	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074152	GCA_002042365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/365/GCA_002042365.1_ASM204236v1	28705959	CFSAN057826
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.81711	32.7	-	CYJC01	16	2946	2826	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2236475	GCA_001287785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/785/GCA_001287785.1_11641_1_74	-	2588STDY5627588
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.86723	32.7	-	CYOA01	17	3033	2911	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384851	GCA_001287805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/805/GCA_001287805.1_12673_5_59	-	2588STDY5748917
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.7015	52.1	-	MZVG01	29	4810	4566	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074161	GCA_002042375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/375/GCA_002042375.1_ASM204237v1	28705959	CFSAN057817
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01118	39.7	-	FEBL01	33	2216	1996	2/9/16	3/13/17	Scaffold	SC	SAMEA2238547	GCA_900047665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/665/GCA_900047665.1_11860_6_81	-	2842STDY5643918
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.00241	50.6	-	FZEW01	100	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140487	GCA_900195475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/475/GCA_900195475.1_F1_409C	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.45698	50.1	-	FZGA01	131	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140452	GCA_900195485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/485/GCA_900195485.1_F1_6B	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12541	39.6	-	FECH01	43	2314	2060	2/9/16	3/15/17	Scaffold	SC	SAMEA2238579	GCA_900047675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/675/GCA_900047675.1_11861_1_17	-	2842STDY5643951
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69222	52.1	-	MZVK01	39	4797	4554	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074157	GCA_002042395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/395/GCA_002042395.1_ASM204239v1	28705959	CFSAN057821
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.83892	32.7	-	CYOV01	25	3008	2852	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2445599	GCA_001287825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/825/GCA_001287825.1_12971_3_18	-	2588STDY5763951
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.84331	32.7	-	CYKJ01	23	2989	2886	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384054	GCA_001287845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/845/GCA_001287845.1_12625_6_22	-	2588STDY5748116
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69748	52.1	-	MZVJ01	30	4797	4564	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074158	GCA_002042405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/405/GCA_002042405.1_ASM204240v1	28705959	CFSAN057820
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01197	39.7	-	FEDS01	35	2204	1978	2/9/16	3/5/17	Scaffold	SC	SAMEA2238648	GCA_900047685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/685/GCA_900047685.1_11861_1_83	-	2842STDY5644020
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.93088	50.2	-	FZFI01	403	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140469	GCA_900195535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/535/GCA_900195535.1_F1_366A	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.10185	50.6	-	FZFT01	95	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140445	GCA_900195555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/555/GCA_900195555.1_F1_1D	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01505	39.8	-	FEER01	16	2251	2014	2/9/16	3/12/17	Scaffold	SC	SAMEA2383273	GCA_900047695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/695/GCA_900047695.1_12754_4_63	-	2842STDY5753820
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.76761	52.1	-	MZVR01	49	4911	4650	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074148	GCA_002042445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/445/GCA_002042445.1_ASM204244v1	28705959	CFSAN057830
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87833	32.6	-	CYPN01	15	3047	2896	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384494	GCA_001287865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/865/GCA_001287865.1_12673_1_82	-	2588STDY5748560
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87901	32.6	-	CYMQ01	20	3048	2894	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384637	GCA_001287885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/885/GCA_001287885.1_12673_3_35	-	2588STDY5748703
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69319	52.1	-	MZVS01	43	4800	4553	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074147	GCA_002042455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/455/GCA_002042455.1_ASM204245v1	28705959	CFSAN057831
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.13325	39.7	-	FCYY01	31	2342	2128	2/6/16	3/13/17	Scaffold	SC	SAMEA2674604	GCA_900047705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/705/GCA_900047705.1_14355_8_77	-	2842STDY5881864
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.48747	50.2	-	FZGF01	492	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140479	GCA_900195575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/575/GCA_900195575.1_F1_402E	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.41763	50.7	-	FZET01	248	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140446	GCA_900195615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/615/GCA_900195615.1_F1_3B	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11606	39.5	-	FCZH01	51	2349	2085	2/6/16	3/12/17	Scaffold	SC	SAMEA2674643	GCA_900047715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/715/GCA_900047715.1_14412_3_21	-	2842STDY5881903
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69909	52.1	-	MZVT01	30	4803	4563	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074146	GCA_002042485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/485/GCA_002042485.1_ASM204248v1	28705959	CFSAN057832
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.89082	32.6	-	CYNG01	23	3040	2907	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384693	GCA_001287905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/905/GCA_001287905.1_12673_3_91	-	2588STDY5748759
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.89858	32.6	-	CYOP01	22	3041	2910	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384888	GCA_001287925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/925/GCA_001287925.1_12673_8_19	-	2588STDY5748954
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.72396	52.1	-	MZVW01	43	4861	4596	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074142	GCA_002042495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/495/GCA_002042495.1_ASM204249v1	28705959	CFSAN057836
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06056	39.6	-	FDAW01	66	2302	2014	2/6/16	3/13/17	Scaffold	SC	SAMEA2382633	GCA_900047725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/725/GCA_900047725.1_12673_6_88	-	2842STDY5753173
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.99014	50.6	-	FZFA01	127	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140486	GCA_900195635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/635/GCA_900195635.1_F1_405E	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.54648	50.3	-	FZGI01	266	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140466	GCA_900195685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/685/GCA_900195685.1_F1_30E	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.05762	39.5	-	FDBP01	22	2255	2039	2/6/16	3/13/17	Scaffold	SC	SAMEA2382652	GCA_900047735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/735/GCA_900047735.1_12673_7_12	-	2842STDY5753193
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70057	52.1	-	MZWH01	37	4808	4560	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074185	GCA_002042525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/525/GCA_002042525.1_ASM204252v1	28705959	CFSAN057847
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87927	32.6	-	CYNK01	21	3023	2895	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384806	GCA_001287945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/945/GCA_001287945.1_12673_5_14	-	2588STDY5748872
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.88327	32.6	-	CYND01	17	3054	2895	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384685	GCA_001287965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/965/GCA_001287965.1_12673_3_83	-	2588STDY5748751
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70215	52.1	-	MZVZ01	33	4804	4570	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074139	GCA_002042535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/535/GCA_002042535.1_ASM204253v1	28705959	CFSAN057839
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00206	39.7	-	FDCA01	45	2219	1995	2/6/16	3/5/17	Scaffold	SC	SAMEA2382663	GCA_900047745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/745/GCA_900047745.1_12673_7_23	-	2842STDY5753204
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.71952	50.9	-	FZGN01	200	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140490	GCA_900195745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/745/GCA_900195745.1_F2_1	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.76081	50.8	-	FZGO01	29	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140454	GCA_900195755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/755/GCA_900195755.1_F1_7B	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06402	39.6	-	FDCI01	41	2255	2003	2/6/16	3/6/17	Scaffold	SC	SAMEA2382670	GCA_900047755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/755/GCA_900047755.1_12673_7_30	-	2842STDY5753211
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70028	52.1	-	MZWJ01	35	4807	4556	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074183	GCA_002042565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/565/GCA_002042565.1_ASM204256v1	28705959	CFSAN057849
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.84782	32.7	-	CYOL01	25	3004	2888	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384883	GCA_001287985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/287/985/GCA_001287985.1_12673_5_91	-	2588STDY5748949
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.92169	32.7	-	CYPP01	18	3091	2962	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384486	GCA_001288005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/005/GCA_001288005.1_12673_1_74	-	2588STDY5748552
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.89611	52	-	MZWL01	295	4987	4689	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074181	GCA_002042585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/585/GCA_002042585.1_ASM204258v1	28705959	CFSAN057851
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.99088	39.8	-	FDCR01	54	2204	1937	2/6/16	3/13/17	Scaffold	SC	SAMEA2382680	GCA_900047765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/765/GCA_900047765.1_12673_7_40	-	2842STDY5753221
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.83036	50.7	-	FZGV01	221	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140491	GCA_900195775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/775/GCA_900195775.1_F2_2	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.86167	50.7	-	FZGT01	94	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140494	GCA_900195785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/785/GCA_900195785.1_F2_6	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01322	39.8	-	FDDL01	17	2246	2004	2/6/16	3/15/17	Scaffold	SC	SAMEA2382700	GCA_900047775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/775/GCA_900047775.1_12673_7_60	-	2842STDY5753241
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69846	52.1	-	MZWN01	38	4796	4557	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074179	GCA_002042595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/595/GCA_002042595.1_ASM204259v1	28705959	CFSAN057853
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.74965	32.6	-	CYJD01	18	2853	2731	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2236482	GCA_001288025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/025/GCA_001288025.1_11641_1_81	-	2588STDY5627595
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87558	32.6	-	CYMT01	21	3020	2888	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384652	GCA_001288045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/045/GCA_001288045.1_12673_3_50	-	2588STDY5748718
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70421	52.1	-	MZWP01	35	4814	4563	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074177	GCA_002042625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/625/GCA_002042625.1_ASM204262v1	28705959	CFSAN057855
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06057	39.7	-	FDFH01	58	2261	2015	2/6/16	3/15/17	Scaffold	SC	SAMEA2382749	GCA_900047785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/785/GCA_900047785.1_12718_4_14	-	2842STDY5753291
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.34129	50.6	-	FZGP01	595	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140493	GCA_900195795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/795/GCA_900195795.1_F2_5	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.04964	50.7	-	FZGY01	484	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140497	GCA_900195805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/805/GCA_900195805.1_F2_10	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.07021	39.6	-	FDGI01	17	2282	2042	2/6/16	3/13/17	Scaffold	SC	SAMEA2382776	GCA_900047795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/795/GCA_900047795.1_12718_4_41	-	2842STDY5753318
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70071	52.1	-	MZWT01	32	4805	4562	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074171	GCA_002042635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/635/GCA_002042635.1_ASM204263v1	28705959	CFSAN057861
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.91867	32.7	-	CYLW01	22	3084	2956	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384415	GCA_001288065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/065/GCA_001288065.1_12673_1_3	-	2588STDY5748481
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.80483	32.7	-	CYJS01	28	2941	2787	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2236421	GCA_001288085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/085/GCA_001288085.1_11641_1_18	-	2588STDY5627534
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73173	52.1	-	MZWV01	32	4840	4594	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074169	GCA_002042665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/665/GCA_002042665.1_ASM204266v1	28705959	CFSAN057863
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10972	39.6	-	FDHP01	52	2303	2052	2/6/16	3/13/17	Scaffold	SC	SAMEA2382809	GCA_900047805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/805/GCA_900047805.1_12718_4_74	-	2842STDY5753351
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.86318	50.7	-	FZGM01	136	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140496	GCA_900195815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/815/GCA_900195815.1_F2_9	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.86713	50.7	-	FZGL01	92	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140495	GCA_900195825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/825/GCA_900195825.1_F2_7	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08236	39.7	-	FDJK01	27	2302	2062	2/6/16	3/13/17	Scaffold	SC	SAMEA2382862	GCA_900047815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/815/GCA_900047815.1_12718_5_32	-	2842STDY5753405
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.68633	52.1	-	MZWX01	44	4788	4540	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074218	GCA_002042675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/675/GCA_002042675.1_ASM204267v1	28705959	CFSAN057865
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.833	32.7	-	CYOZ01	27	2983	2849	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2445662	GCA_001288105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/105/GCA_001288105.1_12971_3_81	-	2588STDY5764014
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.92163	32.7	-	CYOE01	15	3086	2957	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384867	GCA_001288125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/125/GCA_001288125.1_12673_5_75	-	2588STDY5748933
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69827	52.1	-	MZXA01	34	4801	4560	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074214	GCA_002042685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/685/GCA_002042685.1_ASM204268v1	28705959	CFSAN057869
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.18185	39.6	-	FDKE01	31	2388	2127	2/6/16	3/13/17	Scaffold	SC	SAMEA2382883	GCA_900047825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/825/GCA_900047825.1_12718_5_53	-	2842STDY5753426
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.00379	50.7	-	FZGS01	102	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140500	GCA_900195835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/835/GCA_900195835.1_F2_18	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.00753	50.7	-	FZHE01	101	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140505	GCA_900195845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/845/GCA_900195845.1_F2_23	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.01846	39.7	-	FDKC01	23	2231	2014	2/6/16	3/5/17	Scaffold	SC	SAMEA2382881	GCA_900047835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/835/GCA_900047835.1_12718_5_51	-	2842STDY5753424
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.7003	52.1	-	MZXE01	36	4811	4564	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074209	GCA_002042725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/725/GCA_002042725.1_ASM204272v1	28705959	CFSAN057874
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.74016	32.7	-	CYMD01	13	2868	2715	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384581	GCA_001288145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/145/GCA_001288145.1_12673_2_74	-	2588STDY5748647
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.86151	32.7	-	CYOR01	24	3035	2909	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2445537	GCA_001288165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/165/GCA_001288165.1_12971_2_51	-	2588STDY5763888
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70331	52.1	-	MZXM01	51	4808	4569	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074195	GCA_002042745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/745/GCA_002042745.1_ASM204274v1	28705959	CFSAN057888
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.1178	39.6	-	FDKG01	40	2312	2069	2/6/16	3/13/17	Scaffold	SC	SAMEA2382885	GCA_900047845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/845/GCA_900047845.1_12718_5_55	-	2842STDY5753428
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.19326	50.3	-	FZHA01	77	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140492	GCA_900195855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/855/GCA_900195855.1_F2_3	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.78964	50.6	-	FZGQ01	712	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140502	GCA_900195865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/865/GCA_900195865.1_F2_20	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.21875	39.5	-	FDMT01	88	2433	2159	2/6/16	3/13/17	Scaffold	SC	SAMEA2382953	GCA_900047855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/855/GCA_900047855.1_12754_1_28	-	2842STDY5753497
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.73884	52	-	MZXG01	36	4855	4616	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074203	GCA_002042755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/755/GCA_002042755.1_ASM204275v1	28705959	CFSAN057880
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87336	32.6	-	CYMP01	21	3046	2886	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384630	GCA_001288185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/185/GCA_001288185.1_12673_3_28	-	2588STDY5748696
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.92146	32.7	-	CYNM01	24	3089	2954	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384816	GCA_001288205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/205/GCA_001288205.1_12673_5_24	-	2588STDY5748882
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69922	52.1	-	MZXN01	38	4811	4567	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074194	GCA_002042785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/785/GCA_002042785.1_ASM204278v1	28705959	CFSAN057889
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98107	39.8	-	FDNB01	19	2202	1967	2/6/16	3/13/17	Scaffold	SC	SAMEA2382961	GCA_900047865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/865/GCA_900047865.1_12754_1_36	-	2842STDY5753505
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.85565	50.5	-	FZGU01	63	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140511	GCA_900195875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/875/GCA_900195875.1_F2_30	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.92474	50.5	-	FZGR01	159	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140510	GCA_900195885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/885/GCA_900195885.1_F2_29	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.08741	39.5	-	FDNQ01	33	2248	2024	2/6/16	3/13/17	Scaffold	SC	SAMEA2382977	GCA_900047875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/875/GCA_900047875.1_12754_1_52	-	2842STDY5753521
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69962	52.1	-	MZXP01	39	4802	4563	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074192	GCA_002042795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/795/GCA_002042795.1_ASM204279v1	28705959	CFSAN057891
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.91888	32.7	-	CYKY01	15	3078	2946	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384040	GCA_001288225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/225/GCA_001288225.1_12625_6_8	-	2588STDY5748102
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87526	32.6	-	CYMK01	18	3021	2895	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384614	GCA_001288245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/245/GCA_001288245.1_12673_3_12	-	2588STDY5748680
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.6989	52.1	-	MZOZ01	39	4802	4565	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06073969	GCA_002042825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/825/GCA_002042825.1_ASM204282v1	28705959	CFSAN057652
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.04489	39.7	-	FDNY01	29	2272	2032	2/6/16	3/5/17	Scaffold	SC	SAMEA2382986	GCA_900047885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/885/GCA_900047885.1_12754_1_61	-	2842STDY5753530
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.19438	50.2	-	FZGX01	53	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140509	GCA_900195895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/895/GCA_900195895.1_F2_28	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.86303	50.7	-	FZGZ01	95	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140498	GCA_900195905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/905/GCA_900195905.1_F2_13	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98455	39.7	-	FDOA01	27	2185	1928	2/6/16	3/12/17	Scaffold	SC	SAMEA2382988	GCA_900047895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/895/GCA_900047895.1_12754_1_63	-	2842STDY5753532
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70443	52.1	-	MZQS01	35	4809	4574	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074017	GCA_002042845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/845/GCA_002042845.1_ASM204284v1	28705959	CFSAN057697
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87438	32.6	-	CYOG01	19	3018	2887	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384874	GCA_001288265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/265/GCA_001288265.1_12673_5_82	-	2588STDY5748940
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87082	32.6	-	CYMG01	18	3013	2890	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384515	GCA_001288305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/305/GCA_001288305.1_12673_2_8	-	2588STDY5748581
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.69974	52.1	-	MZPS01	29	4799	4560	3/20/17	8/3/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074010	GCA_002042855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/042/855/GCA_002042855.1_ASM204285v1	28705959	CFSAN057671
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.03605	39.6	-	FDPO01	37	2236	1999	2/9/16	3/13/17	Scaffold	SC	SAMEA2383030	GCA_900047905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/905/GCA_900047905.1_12754_2_10	-	2842STDY5753575
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.83587	50.6	-	FZHB01	87	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140503	GCA_900195915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/915/GCA_900195915.1_F2_21	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.19594	50.2	-	FZHC01	57	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140512	GCA_900195925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/925/GCA_900195925.1_F2_31	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11097	39.5	-	FDQF01	51	2332	2080	2/9/16	3/6/17	Scaffold	SC	SAMEA2383047	GCA_900047915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/915/GCA_900047915.1_12754_2_27	-	2842STDY5753592
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89531	52.2	-	MZYC01	67	4999	4775	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448820	GCA_002074175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/175/GCA_002074175.1_ASM207417v1	-	LT2 KO STM1182
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.86845	32.6	-	CYOO01	14	3007	2886	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384801	GCA_001288325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/325/GCA_001288325.1_12673_5_9	-	2588STDY5748867
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.74934	32.7	-	CYOW01	19	2880	2734	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2445582	GCA_001288345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/345/GCA_001288345.1_12971_3_1	-	2588STDY5763934
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89363	52.2	-	MZYA01	58	4987	4773	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448847	GCA_002074185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/185/GCA_002074185.1_ASM207418v1	-	LT2 KO STM1242
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.11889	39.6	-	FEIH01	29	2342	2114	2/9/16	3/5/17	Scaffold	SC	SAMEA2383115	GCA_900047925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/925/GCA_900047925.1_12754_2_95	-	2842STDY5753660
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.17846	50.5	-	FZHK01	129	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140513	GCA_900195935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/935/GCA_900195935.1_F2_32	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.0228	50.6	-	FZHD01	47	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140504	GCA_900195955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/955/GCA_900195955.1_F2_22	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.10109	39.7	-	FEKD01	65	2349	2108	2/9/16	3/13/17	Scaffold	SC	SAMEA2383163	GCA_900047935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/935/GCA_900047935.1_12754_3_48	-	2842STDY5753709
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89511	52.2	-	MZXZ01	68	5001	4780	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448846	GCA_002074215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/215/GCA_002074215.1_ASM207421v1	-	LT2 KO STM3663
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87833	32.6	-	CYMW01	20	3025	2898	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384669	GCA_001288365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/365/GCA_001288365.1_12673_3_67	-	2588STDY5748735
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.72488	32.7	-	CYKG01	14	2829	2716	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384053	GCA_001288385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/385/GCA_001288385.1_12625_6_21	-	2588STDY5748115
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89315	52.2	-	MZXY01	63	4997	4776	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448849	GCA_002074225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/225/GCA_002074225.1_ASM207422v1	-	LT2 KO STM3662
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	1.98724	39.8	-	FEMU01	49	2198	1925	2/9/16	3/6/17	Scaffold	SC	SAMEA2383234	GCA_900047945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/945/GCA_900047945.1_12754_4_24	-	2842STDY5753781
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.19182	50.6	-	FZHG01	123	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140507	GCA_900195965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/965/GCA_900195965.1_F2_25	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.00118	50.6	-	FZHI01	100	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140518	GCA_900195985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/985/GCA_900195985.1_F2_38	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.00134	39.7	-	FEMV01	33	2232	1975	2/9/16	3/13/17	Scaffold	SC	SAMEA2383235	GCA_900047955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/955/GCA_900047955.1_12754_4_25	-	2842STDY5753782
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89497	52.2	-	MZYG01	64	4999	4779	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448839	GCA_002074235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/235/GCA_002074235.1_ASM207423v1	-	LT2 KO STM0260
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.81004	32.7	-	CYLA01	26	2946	2826	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384125	GCA_001288405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/405/GCA_001288405.1_12625_6_93	-	2588STDY5748187
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.8619	32.7	-	CYON01	19	3001	2871	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2445513	GCA_001288425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/425/GCA_001288425.1_12971_2_27	-	2588STDY5763864
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.93239	52.2	-	MZYI01	68	5065	4835	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448821	GCA_002074245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/245/GCA_002074245.1_ASM207424v1	-	LT2 KO STM1209
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.12027	39.5	-	FEMW01	41	2343	2090	2/9/16	3/13/17	Scaffold	SC	SAMEA2383236	GCA_900047965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/965/GCA_900047965.1_12754_4_26	-	2842STDY5753783
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.98415	50.8	-	FZIA01	277	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140514	GCA_900195995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/995/GCA_900195995.1_F2_33	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.00823	50.7	-	FZHL01	101	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140499	GCA_900196005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/005/GCA_900196005.1_F2_17	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.06753	39.5	-	FENL01	24	2247	2024	2/9/16	3/13/17	Scaffold	SC	SAMEA2383251	GCA_900047975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/975/GCA_900047975.1_12754_4_41	-	2842STDY5753798
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.88974	52.2	-	MZYJ01	96	5012	4783	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448824	GCA_002074295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/295/GCA_002074295.1_ASM207429v1	-	LT2 KO STM1558
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.93222	32.7	-	CYKR01	34	3161	2987	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384055	GCA_001288445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/445/GCA_001288445.1_12625_6_23	-	2588STDY5748117
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.80455	32.7	-	CYJI01	19	2936	2814	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2236456	GCA_001288465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/465/GCA_001288465.1_11641_1_55	-	2588STDY5627569
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89353	52.2	-	MZYE01	66	5001	4775	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448843	GCA_002074305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/305/GCA_002074305.1_ASM207430v1	-	LT2 KO STM0016
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.25843	39.6	-	FFRH01	319	2485	2128	2/9/16	6/9/17	Scaffold	SC	SAMEA2203785	GCA_900048105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/105/GCA_900048105.1_11679_1_8	-	2245STDY5608924
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.96478	50.7	-	FZHH01	184	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140501	GCA_900196015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/015/GCA_900196015.1_F2_19	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.00159	50.6	-	FZHY01	149	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140517	GCA_900196035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/035/GCA_900196035.1_F2_37	-	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.01644	39.8	-	FFTS01	36	2211	1984	2/10/16	3/13/17	Scaffold	SC	SAMEA2203861	GCA_900048115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/115/GCA_900048115.1_11657_8_14	-	2245STDY5609001
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89343	52.2	-	MZYB01	55	4978	4779	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448840	GCA_002074335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/335/GCA_002074335.1_ASM207433v1	-	LT2 KO STM2877
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.84737	32.7	-	CYJF01	19	2990	2866	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2236445	GCA_001288485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/485/GCA_001288485.1_11641_1_44	-	2588STDY5627558
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.89767	32.7	-	CYJV01	26	3067	2945	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2236471	GCA_001288505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/505/GCA_001288505.1_11641_1_70	-	2588STDY5627584
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.8937	52.2	-	MZYD01	67	4995	4779	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448848	GCA_002074345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/345/GCA_002074345.1_ASM207434v1	-	LT2 KO STM3717
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04392	39.6	-	FFTT01	20	2252	2018	2/10/16	3/13/17	Scaffold	SC	SAMEA2203862	GCA_900048125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/125/GCA_900048125.1_11657_8_15	-	2245STDY5609002
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.9964	50.6	-	FZHM01	124	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140519	GCA_900196045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/045/GCA_900196045.1_F2_39	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.76236	50	-	FZHS01	438	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140524	GCA_900196055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/055/GCA_900196055.1_F2_44	-	-
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.09837	39.6	-	FEGM01	36	2338	2095	2/9/16	3/13/17	Scaffold	SC	SAMEA2383068	GCA_900048415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/415/GCA_900048415.1_12754_2_48	-	2842STDY5753613
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89546	52.2	-	MZYF01	56	4996	4778	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448844	GCA_002074375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/375/GCA_002074375.1_ASM207437v1	-	LT2 KO STM0148
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87884	32.6	-	CYNH01	22	3048	2894	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384695	GCA_001288525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/525/GCA_001288525.1_12673_3_93	-	2588STDY5748761
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.85095	32.6	-	CYOB01	15	3022	2869	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384848	GCA_001288545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/545/GCA_001288545.1_12673_5_56	-	2588STDY5748914
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89367	52.2	-	MZYH01	62	5004	4781	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448827	GCA_002074385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/385/GCA_002074385.1_ASM207438v1	-	LT2 KO STM0401
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	2.16374	39.6	-	FEHZ01	53	2367	2126	2/9/16	3/13/17	Scaffold	SC	SAMEA2383107	GCA_900048425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/425/GCA_900048425.1_12754_2_87	-	2842STDY5753652
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.83797	50.6	-	FZHO01	89	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140516	GCA_900196065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/065/GCA_900196065.1_F2_36	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.02233	50.5	-	FZHT01	112	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140520	GCA_900196085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/085/GCA_900196085.1_F2_40	-	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04261	39.5	-	FHND01	33	2243	2008	2/10/16	3/13/17	Scaffold	SC	SAMEA2467717	GCA_900048795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/795/GCA_900048795.1_13154_3_40	-	2245STDY5804486
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89546	52.2	-	MZYL01	63	4998	4779	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448845	GCA_002074395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/395/GCA_002074395.1_ASM207439v1	-	LT2 KO STM1869A
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87757	32.6	-	CYOM01	16	3045	2890	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384882	GCA_001288565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/565/GCA_001288565.1_12673_5_90	-	2588STDY5748948
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87308	32.6	-	CYJY01	21	3012	2888	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2236406	GCA_001288585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/585/GCA_001288585.1_11641_1_2	-	2588STDY5627519
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89473	52.2	-	MZYO01	73	4996	4776	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448830	GCA_002074435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/435/GCA_002074435.1_ASM207443v1	-	LT2 KO STM2567
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09177	39.7	-	FHPO01	40	2282	2061	2/10/16	3/13/17	Scaffold	SC	SAMEA2521536	GCA_900048805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/805/GCA_900048805.1_13414_1_80	-	2245STDY5819501
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.23933	50.6	-	FZHQ01	122	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140522	GCA_900196095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/095/GCA_900196095.1_F2_42	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.21111	50.2	-	FZHV01	61	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140534	GCA_900196105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/105/GCA_900196105.1_F2_54	-	-
Streptococcus pneumoniae	1313	PRJEB2102	203746	Terrabacteria group	Firmicutes	2.12071	39.6	-	FIUC01	69	2362	2102	2/10/16	3/5/17	Scaffold	SC	SAMEA686135	GCA_900048865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/865/GCA_900048865.1_4525_8_7	-	C14737
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89526	52.2	-	MZYQ01	63	4988	4778	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448832	GCA_002074445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/445/GCA_002074445.1_ASM207444v1	-	LT2 KO STM2988
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87004	32.6	-	CYMF01	19	3000	2879	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384586	GCA_001288605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/605/GCA_001288605.1_12673_2_79	-	2588STDY5748652
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.82009	32.7	-	CYIO01	23	2955	2837	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2236462	GCA_001288625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/625/GCA_001288625.1_11641_1_61	-	2588STDY5627575
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89558	52.2	-	MZYP01	61	5003	4779	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448831	GCA_002074455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/455/GCA_002074455.1_ASM207445v1	-	LT2 KO STM2831
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.0748	39.8	-	FIUP01	83	2312	2043	2/10/16	3/13/17	Scaffold	SC	SAMEA867918	GCA_900048875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/875/GCA_900048875.1_3850_2_10	-	C13181X
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.98912	50.6	-	FZHR01	108	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140529	GCA_900196115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/115/GCA_900196115.1_F2_49	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.36839	50.3	-	FZIG01	139	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140527	GCA_900196125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/125/GCA_900196125.1_F2_47	-	-
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.1269	39.5	-	FIVX01	90	2354	2111	2/10/16	3/13/17	Scaffold	SC	SAMEA867802	GCA_900048885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/885/GCA_900048885.1_5362_5_4	-	A29943
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89349	52.2	-	MZYR01	61	5000	4783	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448829	GCA_002074465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/465/GCA_002074465.1_ASM207446v1	-	LT2 KO STM3051
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.92182	32.7	-	CYMX01	23	3096	2962	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384608	GCA_001288645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/645/GCA_001288645.1_12673_3_6	-	2588STDY5748674
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.88117	32.7	-	CYIU01	22	3056	2915	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2236495	GCA_001288665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/665/GCA_001288665.1_11641_1_94	-	2588STDY5627608
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89452	52.2	-	MZYY01	55	4995	4780	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448826	GCA_002074515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/515/GCA_002074515.1_ASM207451v1	-	LT2 KO STM4426
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.07306	39.6	-	FHFW01	153	2258	2015	2/10/16	3/13/17	Scaffold	SC	SAMEA2203900	GCA_900048985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/985/GCA_900048985.1_11657_4_34	-	2245STDY5609040
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.84113	50.6	-	FZHX01	100	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140528	GCA_900196135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/135/GCA_900196135.1_F2_48	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.0249	50.7	-	FZIF01	104	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140533	GCA_900196145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/145/GCA_900196145.1_F2_53	-	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.98754	39.8	-	FHKF01	49	2202	1938	2/10/16	3/15/17	Scaffold	SC	SAMEA2335984	GCA_900048995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/995/GCA_900048995.1_12291_4_52	-	2245STDY5699077
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89273	52.2	-	MZYW01	58	4997	4780	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448842	GCA_002074525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/525/GCA_002074525.1_ASM207452v1	-	LT2 KO STM3679
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87445	32.6	-	CYOH01	20	3022	2893	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384864	GCA_001288685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/685/GCA_001288685.1_12673_5_72	-	2588STDY5748930
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.95184	32.6	-	CYJR01	23	3142	2990	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2236441	GCA_001288705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/705/GCA_001288705.1_11641_1_39	-	2588STDY5627554
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89267	52.2	-	MZYV01	65	5001	4770	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448838	GCA_002074545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/545/GCA_002074545.1_ASM207454v1	-	LT2 KO STM3617
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08991	39.6	-	FHKM01	41	2293	2054	2/10/16	3/13/17	Scaffold	SC	SAMEA2335991	GCA_900049005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/005/GCA_900049005.1_12291_4_59	-	2245STDY5699084
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.09553	50.6	-	FZHW01	122	-	-	9/6/17	9/6/17	Scaffold	Ausgem	SAMEA104140525	GCA_900196155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/155/GCA_900196155.1_F2_45	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.99506	50.7	-	FZHU01	94	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140526	GCA_900196165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/165/GCA_900196165.1_F2_46	-	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.13493	39.6	-	FHKN01	64	2379	2114	2/10/16	3/13/17	Scaffold	SC	SAMEA2335992	GCA_900049015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/015/GCA_900049015.1_12291_4_60	-	2245STDY5699085
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89486	52.2	-	MZYS01	63	5006	4780	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448833	GCA_002074555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/555/GCA_002074555.1_ASM207455v1	-	LT2 KO STM3112
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.93129	32.7	-	CYJM01	28	3113	2956	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2236438	GCA_001288725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/725/GCA_001288725.1_11641_1_36	-	2588STDY5627551
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87899	32.6	-	CYOJ01	18	3017	2898	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384880	GCA_001288745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/745/GCA_001288745.1_12673_5_88	-	2588STDY5748946
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89598	52.2	-	MZYZ01	56	4997	4782	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448834	GCA_002074595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/595/GCA_002074595.1_ASM207459v1	-	LT2 KO STM4582
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06827	39.5	-	FHOA01	49	2245	2021	2/10/16	3/5/17	Scaffold	SC	SAMEA2467752	GCA_900049025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/025/GCA_900049025.1_13154_3_73	-	2245STDY5804521
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.30484	50.6	-	FZIC01	148	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140531	GCA_900196175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/175/GCA_900196175.1_F2_51	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.83295	50.6	-	FZIB01	96	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140521	GCA_900196185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/185/GCA_900196185.1_F2_41	-	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.05523	39.6	-	FHPW01	24	2246	2003	2/10/16	3/12/17	Scaffold	SC	SAMEA2521540	GCA_900049035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/035/GCA_900049035.1_13414_1_84	-	2245STDY5819505
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89339	52.2	-	MZZD01	63	4998	4777	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN05200449	GCA_002074605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/605/GCA_002074605.1_ASM207460v1	-	LT2 KO STM2896
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.91534	32.7	-	CYLI01	31	3078	2956	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384280	GCA_001288765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/765/GCA_001288765.1_12641_2_58	-	2588STDY5748344
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.92312	32.7	-	CYKX01	16	3114	2957	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384116	GCA_001288785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/785/GCA_001288785.1_12625_6_84	-	2588STDY5748178
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89483	52.2	-	MZYM01	62	4999	4779	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448841	GCA_002074635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/635/GCA_002074635.1_ASM207463v1	-	LT2 KO STM1911
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08402	39.5	-	FHPS01	29	2262	2037	2/10/16	3/13/17	Scaffold	SC	SAMEA2521541	GCA_900049045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/045/GCA_900049045.1_13414_1_85	-	2245STDY5819506
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.30731	50.6	-	FZHZ01	160	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140530	GCA_900196195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/195/GCA_900196195.1_F2_50	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.3078	50.5	-	FZID01	149	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140532	GCA_900196205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/205/GCA_900196205.1_F2_52	-	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.11167	39.5	-	FHPT01	62	2293	2034	2/10/16	3/13/17	Scaffold	SC	SAMEA2521542	GCA_900049055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/055/GCA_900049055.1_13414_1_86	-	2245STDY5819507
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.8929	52.2	-	MZYK01	60	5002	4786	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448825	GCA_002074655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/655/GCA_002074655.1_ASM207465v1	-	LT2 KO STM1559
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87625	32.6	-	CYLK01	27	3019	2893	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384288	GCA_001288805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/805/GCA_001288805.1_12641_2_66	-	2588STDY5748352
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87797	32.6	-	CYMM01	20	3045	2895	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384622	GCA_001288825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/825/GCA_001288825.1_12673_3_20	-	2588STDY5748688
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89475	52.2	-	MZYN01	64	5006	4788	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448828	GCA_002074675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/675/GCA_002074675.1_ASM207467v1	-	LT2 KO STM2166
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06454	39.6	-	FHPV01	16	2279	2042	2/10/16	3/13/17	Scaffold	SC	SAMEA2521543	GCA_900049065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/065/GCA_900049065.1_13414_1_87	-	2245STDY5819508
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.99403	50.7	-	FZIE01	110	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140515	GCA_900196215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/215/GCA_900196215.1_F2_34	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.30657	50.4	-	FZII01	126	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140540	GCA_900196235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/235/GCA_900196235.1_F2_61	-	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0594	39.6	-	FHRA01	35	2235	2016	2/10/16	3/13/17	Scaffold	SC	SAMEA2521582	GCA_900049075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/075/GCA_900049075.1_13414_2_31	-	2245STDY5819548
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89268	52.2	-	MZYT01	61	4999	4782	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448837	GCA_002074685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/685/GCA_002074685.1_ASM207468v1	-	LT2 KO STM3513
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.89799	32.6	-	CYOI01	23	3067	2910	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384879	GCA_001288845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/845/GCA_001288845.1_12673_5_87	-	2588STDY5748945
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.91866	32.7	-	CYMB01	21	3098	2956	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384464	GCA_001288865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/865/GCA_001288865.1_12673_1_52	-	2588STDY5748530
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89328	52.2	-	MZYU01	59	5000	4776	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448836	GCA_002074715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/715/GCA_002074715.1_ASM207471v1	-	LT2 KO STM3605
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.11228	39.6	-	FHRT01	31	2330	2077	2/10/16	3/13/17	Scaffold	SC	SAMEA2521605	GCA_900049085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/085/GCA_900049085.1_13414_2_54	-	2245STDY5819571
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.0757	50.5	-	FZIM01	129	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140538	GCA_900196245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/245/GCA_900196245.1_F2_58	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.04437	50.6	-	FZIL01	53	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140537	GCA_900196255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/255/GCA_900196255.1_F2_57	-	-
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.07001	39.6	-	FIWV01	92	2246	2037	2/10/16	3/5/17	Scaffold	SC	SAMEA867836	GCA_900049205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/205/GCA_900049205.1_5390_5_4	-	B16392
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.8938	52.2	-	MZYX01	58	5010	4776	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448835	GCA_002074735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/735/GCA_002074735.1_ASM207473v1	-	LT2 KO STM3747
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.91788	32.8	-	CYKV01	37	3102	2959	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384087	GCA_001288885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/885/GCA_001288885.1_12625_6_55	-	2588STDY5748149
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.92144	32.7	-	CYOS01	24	3092	2957	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2445521	GCA_001288905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/905/GCA_001288905.1_12971_2_35	-	2588STDY5763872
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89365	52.2	-	MZZA01	65	5004	4774	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN05200446	GCA_002074745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/745/GCA_002074745.1_ASM207474v1	-	LT2 KO STM4298
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.10114	39.5	-	FIWF01	95	2287	2074	2/10/16	3/6/17	Scaffold	SC	SAMEA867807	GCA_900049215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/215/GCA_900049215.1_5390_5_10	-	A28640
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.33044	50.4	-	FZIJ01	93	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140542	GCA_900196265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/265/GCA_900196265.1_F2_63	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.61937	50.3	-	FZIO01	131	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140541	GCA_900196275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/275/GCA_900196275.1_F2_62	-	-
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.17123	39.5	-	FIWC01	79	2382	2166	2/10/16	3/5/17	Scaffold	SC	SAMEA1033990	GCA_900049225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/225/GCA_900049225.1_7004_3_94	-	D27950
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89633	52.2	-	MZZC01	53	5003	4778	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448822	GCA_002074775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/775/GCA_002074775.1_ASM207477v1	-	LT2 KO STM4019
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.91477	32.6	-	CYNL01	23	3088	2930	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384808	GCA_001288925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/925/GCA_001288925.1_12673_5_16	-	2588STDY5748874
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.88536	32.6	-	CYJO01	30	3061	2905	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2236429	GCA_001288965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/965/GCA_001288965.1_11641_1_26	-	2588STDY5627542
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89356	52.2	-	MZZB01	60	4991	4773	3/29/17	4/1/17	Scaffold	University of California at Davis	SAMN06448823	GCA_002074795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/074/795/GCA_002074795.1_ASM207479v1	-	LT2 KO STM0041
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06503	39.5	-	FHTA01	33	2278	2034	2/10/16	3/13/17	Scaffold	SC	SAMEA2521654	GCA_900049335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/335/GCA_900049335.1_13414_3_8	-	2245STDY5819621
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.61852	50.3	-	FZIP01	146	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140539	GCA_900196285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/285/GCA_900196285.1_F2_60	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.41627	50.4	-	FZIK01	75	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140536	GCA_900196295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/295/GCA_900196295.1_F2_56	-	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06042	39.6	-	FHHZ01	35	2274	2034	2/10/16	3/6/17	Scaffold	SC	SAMEA2204006	GCA_900049475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/475/GCA_900049475.1_11657_8_30	-	2245STDY5609147
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.6912	52.1	-	NBNA01	41	4783	4548	4/3/17	4/5/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074217	GCA_002076975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/975/GCA_002076975.1_ASM207697v1	-	CFSAN057866
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.85634	32.7	-	CYOY01	17	3009	2870	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2445655	GCA_001288985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/288/985/GCA_001288985.1_12971_3_74	-	2588STDY5764007
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.8107	32.7	-	CYIP01	18	2961	2839	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2236487	GCA_001289005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/005/GCA_001289005.1_11641_1_86	-	2588STDY5627600
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.695	52.1	-	NBNB01	38	4792	4551	4/3/17	4/10/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074144	GCA_002076985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/076/985/GCA_002076985.1_ASM207698v1	-	CFSAN057834
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08368	39.6	-	FHJP01	37	2304	2060	2/10/16	3/13/17	Scaffold	SC	SAMEA2335966	GCA_900049485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/485/GCA_900049485.1_12291_4_34	-	2245STDY5699059
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.96632	50.6	-	FZIN01	297	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140543	GCA_900196305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/305/GCA_900196305.1_F2_64	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.97584	50.6	-	FZIS01	124	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140544	GCA_900196315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/315/GCA_900196315.1_F2_65	-	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04858	39.7	-	FHKR01	38	2246	2020	2/10/16	3/13/17	Scaffold	SC	SAMEA2335997	GCA_900049495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/495/GCA_900049495.1_12291_4_65	-	2245STDY5699090
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70014	52.1	-	NBNC01	42	4798	4559	4/3/17	4/5/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06074092	GCA_002077015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/015/GCA_002077015.1_ASM207701v1	-	CFSAN057773
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.8015	32.7	-	CYLB01	13	2944	2826	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384126	GCA_001289025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/025/GCA_001289025.1_12625_6_94	-	2588STDY5748188
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.96225	32.6	-	CYNS01	33	3134	2994	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384832	GCA_001289045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/045/GCA_001289045.1_12673_5_40	-	2588STDY5748898
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.70411	52.1	-	NBMZ01	45	4809	4563	4/3/17	4/5/17	Scaffold	Center for Food Safety and Applied Nutrition	SAMN06611255	GCA_002077315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/077/315/GCA_002077315.1_ASM207731v1	-	CFSAN057744
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04515	39.7	-	FHLL01	45	2260	2019	2/10/16	3/13/17	Scaffold	SC	SAMEA2336024	GCA_900049505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/505/GCA_900049505.1_12291_5_2	-	2245STDY5699117
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.02668	50.6	-	FZJB01	173	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140545	GCA_900196325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/325/GCA_900196325.1_F2_66	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.6148	50.3	-	FZIW01	125	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140546	GCA_900196335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/335/GCA_900196335.1_F2_67	-	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.12011	39.6	-	FHOR01	62	2339	2093	2/10/16	3/15/17	Scaffold	SC	SAMEA2467770	GCA_900049515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/515/GCA_900049515.1_13154_3_91	-	2245STDY5804539
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA308370	308370	Proteobacteria	Gammaproteobacteria	5.24306	51.9	-	NAAN01	108	5452	5144	4/13/17	4/17/17	Scaffold	Cornell University	SAMN04394777	GCA_002091095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/095/GCA_002091095.1_ASM209109v1	-	R9_3274_R1
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87491	32.6	-	CYNV01	19	3042	2892	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384842	GCA_001289065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/065/GCA_001289065.1_12673_5_50	-	2588STDY5748908
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.92171	32.7	-	CYJQ01	21	3087	2962	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2236494	GCA_001289085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/085/GCA_001289085.1_11641_1_93	-	2588STDY5627607
Salmonella enterica subsp. enterica	59201	PRJNA369273	369273	Proteobacteria	Gammaproteobacteria	4.70156	52.1	-	MUNA01	61	4842	4512	4/21/17	4/24/17	Scaffold	Universidad de los Andes	SAMN06283410	GCA_002105275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/105/275/GCA_002105275.1_ASM210527v1	-	s25pp
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06467	39.5	-	FHOS01	31	2254	2014	2/10/16	3/13/17	Scaffold	SC	SAMEA2521465	GCA_900049525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/525/GCA_900049525.1_13414_1_15	-	2245STDY5819436
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.19664	50.8	-	FZIY01	75	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140564	GCA_900196345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/345/GCA_900196345.1_F2_85	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.29577	50.5	-	FZJH01	165	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140557	GCA_900196355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/355/GCA_900196355.1_F2_78	-	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06017	39.5	-	FHPB01	35	2280	2036	2/10/16	3/13/17	Scaffold	SC	SAMEA2521518	GCA_900049535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/535/GCA_900049535.1_13414_1_62	-	2245STDY5819483
"Salmonella enterica subsp. enterica serovar 4,[5],12:i:-"	440524	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.9062	52.1	-	NBQF01	65	5052	4763	4/24/17	4/26/17	Scaffold	New York State Dept. of Health - Wadsworth Center	SAMN01902503	GCA_002106195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/195/GCA_002106195.1_ASM210619v1	-	NY_FSL S10-1237
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87637	32.6	-	CYPG01	15	3048	2889	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384547	GCA_001289105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/105/GCA_001289105.1_12673_2_40	-	2588STDY5748613
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87784	32.6	-	CYIW01	16	3043	2893	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2383967	GCA_001289125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/125/GCA_001289125.1_12625_5_30	-	2588STDY5748027
Salmonella enterica subsp. enterica	59201	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.91556	52.1	-	NBRS01	78	5054	4802	4/24/17	4/26/17	Scaffold	New York State Dept. of Health - Wadsworth Center	SAMN01902459	GCA_002107425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/107/425/GCA_002107425.1_ASM210742v1	-	NY_FSL P3-1558
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06554	39.5	-	FHQA01	46	2292	2043	2/10/16	3/8/17	Scaffold	SC	SAMEA2521549	GCA_900049545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/545/GCA_900049545.1_13414_1_93	-	2245STDY5819514
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.14806	50.4	-	FZIQ01	85	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140549	GCA_900196365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/365/GCA_900196365.1_F2_70	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.14798	50.4	-	FZIX01	92	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140550	GCA_900196385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/385/GCA_900196385.1_F2_71	-	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.02893	39.8	-	FHSC01	38	2228	1997	2/10/16	3/13/17	Scaffold	SC	SAMEA2521618	GCA_900049555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/555/GCA_900049555.1_13414_2_67	-	2245STDY5819584
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA380335	380335	Proteobacteria	Gammaproteobacteria	4.98541	52.1	-	NBAV01	63	5116	4776	5/8/17	9/3/17	Scaffold	Salmoiber	SAMN06640695	GCA_002119135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/119/135/GCA_002119135.1_ASM211913v1	28729277	SPE101
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.91724	32.7	-	CYMC01	22	3109	2943	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384563	GCA_001289145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/145/GCA_001289145.1_12673_2_56	-	2588STDY5748629
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.8059	32.6	-	CYLL01	29	2944	2823	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384296	GCA_001289165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/165/GCA_001289165.1_12641_2_74	-	2588STDY5748360
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.92219	52.2	-	NBAS01	63	5026	4729	6/19/17	6/22/17	Scaffold	CFSAN	SAMN06552086	GCA_002198745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/198/745/GCA_002198745.1_ASM219874v1	-	UZH-SAL-173-13
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.01436	39.8	-	FHUZ01	24	2255	2014	2/10/16	3/13/17	Scaffold	SC	SAMEA2796710	GCA_900049565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/565/GCA_900049565.1_14673_4_17	-	2245STDY5982736
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.87479	50.5	-	FZIU01	95	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140556	GCA_900196395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/395/GCA_900196395.1_F2_77	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.87619	50.5	-	FZIR01	94	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140565	GCA_900196405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/405/GCA_900196405.1_F2_86	-	-
Streptococcus pneumoniae	1313	PRJEB2102	203746	Terrabacteria group	Firmicutes	2.08359	39.7	-	FITW01	59	2348	2069	2/10/16	3/5/17	Scaffold	SC	SAMEA686019	GCA_900049695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/695/GCA_900049695.1_4525_8_12	-	B16942a
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.91994	52.2	-	NAOT01	55	5029	4719	6/19/17	6/22/17	Scaffold	CFSAN	SAMN06552087	GCA_002200275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/275/GCA_002200275.1_ASM220027v1	-	UZH-SAL-169-15
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.9258	32.7	-	CYIT01	21	3090	2963	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2383983	GCA_001289185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/185/GCA_001289185.1_12625_5_46	-	2588STDY5748043
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87805	32.6	-	CYNA01	18	3019	2896	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384676	GCA_001289205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/205/GCA_001289205.1_12673_3_74	-	2588STDY5748742
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.9167	52.2	-	NAOV01	44	5021	4718	6/19/17	6/22/17	Scaffold	CFSAN	SAMN06552089	GCA_002200315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/315/GCA_002200315.1_ASM220031v1	-	UZH-SAL-153-13
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.09459	39.3	-	FIVR01	88	2285	2086	2/10/16	3/5/17	Scaffold	SC	SAMEA867837	GCA_900049715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/715/GCA_900049715.1_5390_5_5	-	B16827
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.87488	50.5	-	FZIV01	93	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140566	GCA_900196415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/415/GCA_900196415.1_F2_87	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.22056	50.6	-	FZIT01	219	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140555	GCA_900196425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/425/GCA_900196425.1_F2_76	-	-
Streptococcus pneumoniae	1313	PRJEB2098	203734	Terrabacteria group	Firmicutes	2.08248	39.6	-	FIXE01	65	2286	2046	2/10/16	3/13/17	Scaffold	SC	SAMEA807323	GCA_900049725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/725/GCA_900049725.1_4353_2_11	-	64D32289
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.86753	52.2	-	NAOU01	67	4955	4649	6/19/17	6/22/17	Scaffold	CFSAN	SAMN06552088	GCA_002200325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/325/GCA_002200325.1_ASM220032v1	-	UZH-SAL-169-10
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.90408	32.7	-	CYJE01	27	3062	2945	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2236486	GCA_001289225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/225/GCA_001289225.1_11641_1_85	-	2588STDY5627599
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87926	32.6	-	CYKQ01	17	3021	2890	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384084	GCA_001289245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/245/GCA_001289245.1_12625_6_52	-	2588STDY5748146
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.9837	52.1	-	NAOX01	65	5113	4790	6/19/17	6/22/17	Scaffold	CFSAN	SAMN06552091	GCA_002200365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/365/GCA_002200365.1_ASM220036v1	-	UZH-SAL-144-13
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.04121	39.8	-	FIXM01	77	2215	1954	2/10/16	3/13/17	Scaffold	SC	SAMEA867763	GCA_900049735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/735/GCA_900049735.1_3850_1_8	-	C14376X
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.19077	50.7	-	FZIZ01	169	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140568	GCA_900196435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/435/GCA_900196435.1_F2_91	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.64186	50.2	-	FZJV01	138	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140547	GCA_900196445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/445/GCA_900196445.1_F2_68	-	-
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.09961	39.4	-	FIXS01	49	2297	2079	2/10/16	3/6/17	Scaffold	SC	SAMEA1033635	GCA_900049745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/745/GCA_900049745.1_6972_8_38	-	A32279
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.91304	52.2	-	NAOY01	51	5020	4721	6/19/17	6/22/17	Scaffold	CFSAN	SAMN06552092	GCA_002200395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/395/GCA_002200395.1_ASM220039v1	-	UZH-SAL-133-13
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87226	32.6	-	CYJU01	27	3039	2890	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2236413	GCA_001289265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/265/GCA_001289265.1_11641_1_10	-	2588STDY5627526
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.8214	32.6	-	CYLO01	27	2954	2838	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384304	GCA_001289285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/285/GCA_001289285.1_12641_2_82	-	2588STDY5748368
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.96403	52.2	-	NAPA01	70	5084	4766	6/19/17	6/22/17	Scaffold	CFSAN	SAMN06552094	GCA_002200405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/405/GCA_002200405.1_ASM220040v1	-	UZH-SAL-125-15
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.03141	39.8	-	FHHX01	31	2226	1992	2/10/16	3/13/17	Scaffold	SC	SAMEA2204003	GCA_900049825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/825/GCA_900049825.1_11511_8_54	-	2245STDY5609144
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.83198	50.7	-	FZJC01	85	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140551	GCA_900196455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/455/GCA_900196455.1_F2_72	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.87444	50.5	-	FZJM01	95	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140558	GCA_900196465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/465/GCA_900196465.1_F2_79	-	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09513	39.5	-	FHJG01	20	2299	2069	2/10/16	3/8/17	Scaffold	SC	SAMEA2335956	GCA_900049835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/835/GCA_900049835.1_12291_4_24	-	2245STDY5699049
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.92957	52.1	-	NAPC01	65	5039	4724	6/19/17	6/22/17	Scaffold	CFSAN	SAMN06552097	GCA_002200415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/415/GCA_002200415.1_ASM220041v1	-	UZH-SAL-119-15
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87425	32.6	-	CYLS01	21	3030	2897	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384320	GCA_001289305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/305/GCA_001289305.1_12641_3_3	-	2588STDY5748385
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87568	32.6	-	CYNE01	18	3015	2890	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384692	GCA_001289325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/325/GCA_001289325.1_12673_3_90	-	2588STDY5748758
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.92519	52.2	-	NAPK01	49	5032	4729	6/19/17	6/22/17	Scaffold	CFSAN	SAMN06552078	GCA_002200475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/475/GCA_002200475.1_ASM220047v1	-	UZH-SAL-20-15
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.1692	39.6	-	FHJM01	66	2414	2157	2/10/16	3/12/17	Scaffold	SC	SAMEA2335963	GCA_900049845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/845/GCA_900049845.1_12291_4_31	-	2245STDY5699056
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.19119	50.7	-	FZJA01	181	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140571	GCA_900196485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/485/GCA_900196485.1_F2_96	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.37428	50.4	-	FZJK01	194	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140559	GCA_900196495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/495/GCA_900196495.1_F2_80	-	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.17329	39.5	-	FHMD01	214	2397	2112	2/10/16	3/13/17	Scaffold	SC	SAMEA2467536	GCA_900049855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/855/GCA_900049855.1_13091_6_85	-	2245STDY5804436
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.57618	52.3	-	NAPF01	50	4634	4391	6/19/17	6/22/17	Scaffold	CFSAN	SAMN06552102	GCA_002200485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/485/GCA_002200485.1_ASM220048v1	-	UZH-SAL-111-10
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.82361	32.7	-	CYIZ01	18	2963	2848	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2236492	GCA_001289345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/345/GCA_001289345.1_11641_1_91	-	2588STDY5627605
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.86262	32.7	-	CYMA01	18	3002	2876	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384462	GCA_001289365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/365/GCA_001289365.1_12673_1_50	-	2588STDY5748528
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.97905	52.1	-	NAPP01	111	5130	4791	6/19/17	6/22/17	Scaffold	CFSAN	SAMN06552077	GCA_002200555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/555/GCA_002200555.1_ASM220055v1	-	UZH-SAL-21-13
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0073	39.7	-	FHQX01	39	2215	1998	2/10/16	3/5/17	Scaffold	SC	SAMEA2521579	GCA_900049865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/865/GCA_900049865.1_13414_2_28	-	2245STDY5819545
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.19814	50.8	-	FZJL01	90	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140567	GCA_900196505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/505/GCA_900196505.1_F2_88	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.78342	50.9	-	FZJN01	112	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140570	GCA_900196515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/515/GCA_900196515.1_F2_94	-	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.00797	39.7	-	FHSL01	21	2184	1968	2/10/16	3/13/17	Scaffold	SC	SAMEA2521629	GCA_900049875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/875/GCA_900049875.1_13414_2_78	-	2245STDY5819595
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.77122	52.3	-	NAOZ01	261	4840	4562	6/19/17	6/22/17	Scaffold	CFSAN	SAMN06552093	GCA_002200575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/575/GCA_002200575.1_ASM220057v1	-	UZH-SAL-126-15
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.91453	32.6	-	CYMV01	21	3082	2927	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384660	GCA_001289385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/385/GCA_001289385.1_12673_3_58	-	2588STDY5748726
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.77189	32.7	-	CYKD01	12	2911	2780	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384001	GCA_001289405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/405/GCA_001289405.1_12625_5_64	-	2588STDY5748061
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.91425	52.2	-	NAPB01	48	5024	4716	6/19/17	6/22/17	Scaffold	CFSAN	SAMN06552095	GCA_002200605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/605/GCA_002200605.1_ASM220060v1	-	UZH-SAL-123-13
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.02919	39.6	-	FHSN01	31	2230	1989	2/10/16	3/13/17	Scaffold	SC	SAMEA2521632	GCA_900049885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/885/GCA_900049885.1_13414_2_81	-	2245STDY5819598
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.80244	50.8	-	FZJI01	85	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140554	GCA_900196525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/525/GCA_900196525.1_F2_75	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.34968	50.2	-	FZJO01	99	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140560	GCA_900196535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/535/GCA_900196535.1_F2_81	-	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.17291	39.6	-	FHVH01	63	2417	2157	2/10/16	3/13/17	Scaffold	SC	SAMEA2796719	GCA_900049895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/049/895/GCA_900049895.1_14673_4_26	-	2245STDY5982745
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.91314	52.2	-	NAPD01	61	5022	4722	6/19/17	6/22/17	Scaffold	CFSAN	SAMN06552099	GCA_002200635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/635/GCA_002200635.1_ASM220063v1	-	UZH-SAL-115-10
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.89678	32.7	-	CYNF01	17	3058	2931	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384724	GCA_001289425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/425/GCA_001289425.1_12673_4_27	-	2588STDY5748790
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.84497	32.8	-	CYPF01	32	2995	2865	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384571	GCA_001289445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/445/GCA_001289445.1_12673_2_64	-	2588STDY5748637
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.6633	52.3	-	NAPU01	39	4738	4496	6/19/17	6/22/17	Scaffold	CFSAN	SAMN06552104	GCA_002200655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/655/GCA_002200655.1_ASM220065v1	-	UZH-SAL-100-13
Streptococcus pneumoniae	1313	PRJEB2102	203746	Terrabacteria group	Firmicutes	2.10835	39.6	-	FITZ01	42	2356	2090	2/10/16	3/13/17	Scaffold	SC	SAMEA685706	GCA_900050105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/105/GCA_900050105.1_4752_1_11	-	A32245
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	4.84203	50.8	-	FZJU01	84	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140553	GCA_900196545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/545/GCA_900196545.1_F2_74	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.74202	50.4	-	FZJD01	227	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140562	GCA_900196555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/555/GCA_900196555.1_F2_83	-	-
Streptococcus pneumoniae	1313	PRJEB2098	203734	Terrabacteria group	Firmicutes	2.10182	39.3	-	FIVQ01	78	2285	2089	2/10/16	3/13/17	Scaffold	SC	SAMEA807332	GCA_900050115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/115/GCA_900050115.1_4353_2_7	-	66C11367
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.94162	52.1	-	NAPG01	56	5060	4748	6/19/17	6/22/17	Scaffold	CFSAN	SAMN06552107	GCA_002200665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/665/GCA_002200665.1_ASM220066v1	-	UZH-SAL-97-15
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.86741	32.7	-	CYKS01	17	2997	2878	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384092	GCA_001289465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/465/GCA_001289465.1_12625_6_60	-	2588STDY5748154
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.9255	32.7	-	CYIS01	17	3091	2961	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2383481	GCA_001289485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/485/GCA_001289485.1_12625_2_19	-	2588STDY5747536
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.92839	52.2	-	NAPH01	72	5031	4732	6/19/17	6/22/17	Scaffold	CFSAN	SAMN06552114	GCA_002200675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/675/GCA_002200675.1_ASM220067v1	-	UZH-SAL-69-15
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.10485	39.6	-	FIVZ01	40	2323	2078	2/10/16	3/13/17	Scaffold	SC	SAMEA1033673	GCA_900050125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/125/GCA_900050125.1_7004_3_55	-	C14277
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.40865	50.2	-	FZKA01	108	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140563	GCA_900196605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/605/GCA_900196605.1_F2_84	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.40909	50.2	-	FZJX01	106	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140561	GCA_900196645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/645/GCA_900196645.1_F2_82	-	-
Streptococcus pneumoniae	1313	PRJEB2098	203734	Terrabacteria group	Firmicutes	2.10421	39.5	-	FIWE01	60	2330	2108	2/10/16	3/5/17	Scaffold	SC	SAMEA807324	GCA_900050135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/135/GCA_900050135.1_4353_2_8	-	65D32344
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.91002	52.2	-	NAPL01	59	5016	4716	6/19/17	6/22/17	Scaffold	CFSAN	SAMN06552074	GCA_002200745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/745/GCA_002200745.1_ASM220074v1	-	UZH-SAL-17-10
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87446	32.6	-	CYMI01	15	3013	2891	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384621	GCA_001289505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/505/GCA_001289505.1_12673_3_19	-	2588STDY5748687
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87883	32.6	-	CYMY01	24	3025	2896	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384645	GCA_001289525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/525/GCA_001289525.1_12673_3_43	-	2588STDY5748711
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.92122	52.2	-	NAPM01	49	5030	4726	6/19/17	6/22/17	Scaffold	CFSAN	SAMN06552075	GCA_002200795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/795/GCA_002200795.1_ASM220079v1	-	UZH-SAL-15-15
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.12829	39.6	-	FIYH01	49	2403	2137	2/10/16	3/13/17	Scaffold	SC	SAMEA1033604	GCA_900050155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/155/GCA_900050155.1_7004_3_40	-	B21980
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.19697	50.7	-	FZJT01	332	-	-	9/6/17	9/23/17	Scaffold	Ausgem	SAMEA104140583	GCA_900196675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/196/675/GCA_900196675.1_F2_97	-	-
Escherichia coli	562	PRJEB21464	401553	Proteobacteria	Gammaproteobacteria	5.15029	50.4	-	FZQC01	88	-	-	9/7/17	9/23/17	Scaffold	Ausgem	SAMEA104140548	GCA_900199255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/199/255/GCA_900199255.1_F2_69	-	-
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	1.99243	39.7	-	FIYN01	37	2192	1964	2/10/16	3/13/17	Scaffold	SC	SAMEA1033880	GCA_900050165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/165/GCA_900050165.1_7004_3_27	-	B19805
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.95388	52.1	-	NAPW01	96	5091	4768	6/19/17	6/22/17	Scaffold	CFSAN	SAMN06552076	GCA_002200805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/200/805/GCA_002200805.1_ASM220080v1	-	UZH-SAL-3-15
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.79599	32.7	-	CYLE01	19	2934	2816	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2383890	GCA_001289545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/545/GCA_001289545.1_12641_1_48	-	2588STDY5747949
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.88141	32.6	-	CYJK01	19	3022	2894	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2383959	GCA_001289565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/565/GCA_001289565.1_12625_5_22	-	2588STDY5748019
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.75131	52.2	-	NJAM01	38	4849	4614	6/23/17	6/26/17	Scaffold	CFSAN	SAMN07249549	GCA_002206125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/125/GCA_002206125.1_ASM220612v1	-	UZH-SAL-99-15
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.11616	39.6	-	FHHM01	56	2376	2107	2/10/16	3/13/17	Scaffold	SC	SAMEA2203957	GCA_900050295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/295/GCA_900050295.1_11679_1_45	-	2245STDY5609098
synthetic Escherichia coli C321.deltaA	1385755	PRJNA272518	272518	Proteobacteria	Gammaproteobacteria	4.65016	50.8	chromosome:CP010455.1	-	1	-	-	1/21/15	2/2/15	Chromosome	Yale University	SAMN03283144	GCA_000826905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/905/GCA_000826905.1_ASM82690v1	-	C321.deltaA substr. rEc.y.dC.46
synthetic Escherichia coli C321.deltaA	1385755	PRJNA272520	272520	Proteobacteria	Gammaproteobacteria	4.65015	50.8	chromosome:CP010456.1	-	1	-	-	1/21/15	2/2/15	Chromosome	Yale University	SAMN03283190	GCA_000826925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/826/925/GCA_000826925.1_ASM82692v1	-	C321.deltaA substr. rEc.b.dC.12
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99209	39.8	-	FHIV01	49	2206	1938	2/10/16	3/8/17	Scaffold	SC	SAMEA2204030	GCA_900050305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/305/GCA_900050305.1_11511_8_62	-	2245STDY5609171
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA378379	378379	Proteobacteria	Gammaproteobacteria	4.87175	52.2	-	NKQL01	54	4950	4637	7/31/17	8/3/17	Scaffold	CFSAN	SAMN06552110	GCA_002237355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/355/GCA_002237355.1_ASM223735v1	28751886	UZH-SAL-78-10
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.92244	32.7	-	CYLX01	21	3096	2970	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384431	GCA_001289585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/585/GCA_001289585.1_12673_1_19	-	2588STDY5748497
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.93025	32.7	-	CYMS01	68	3122	2974	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384613	GCA_001289605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/605/GCA_001289605.1_12673_3_11	-	2588STDY5748679
Salmonella enterica subsp. enterica serovar Newport str. CVM21537	1399780	PRJNA218817	218817	Proteobacteria	Gammaproteobacteria	4.96422	52.2	-	JAMJ01	69	5129	4888	8/7/17	8/9/17	Scaffold	"University of Maryland, College Park"	SAMN02737301	GCA_002242205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/205/GCA_002242205.1_ASM224220v1	-	CVM21537
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.11496	39.6	-	FHKX01	69	2290	2042	2/10/16	3/5/17	Scaffold	SC	SAMEA2336008	GCA_900050315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/315/GCA_900050315.1_12291_4_76	-	2245STDY5699101
Candidatus Sulcia muelleri DMIN	641892	PRJNA37785	37785	FCB group	Bacteroidetes/Chlorobi group	0.243933	22.5	chromosome:CP001981.1	-	1	261	226	3/31/10	7/28/15	Complete Genome	US DOE Joint Genome Institute	SAMN00011633	GCA_000025785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/025/785/GCA_000025785.1_ASM2578v1	-	DMIN
Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis	36870	PRJNA274	274	Proteobacteria	Gammaproteobacteria	0.703004	22.4962	chromosome:NC_004344.2/BA000021.3; plasmid pWb1:NC_003425.1/AB063523.1	-	2	686	636	10/24/02	4/6/17	Complete Genome	Yale Univ.	SAMD00061100	GCA_000008885.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/008/885/GCA_000008885.1_ASM888v1	12219091	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09011	39.8	-	FHMB01	122	2292	2043	2/10/16	3/13/17	Scaffold	SC	SAMEA2467532	GCA_900050325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/325/GCA_900050325.1_13091_6_81	-	2245STDY5804432
Salmonella enterica subsp. enterica serovar Newport str. CVM17619	1399785	PRJNA218824	218824	Proteobacteria	Gammaproteobacteria	4.9386	52.1	-	JAMO01	116	5134	4806	8/7/17	8/9/17	Scaffold	"University of Maryland, College Park"	SAMN02737308	GCA_002242225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/225/GCA_002242225.1_ASM224222v1	-	CVM17619
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.84969	32.7	-	CYIJ01	20	2989	2868	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2236461	GCA_001289625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/625/GCA_001289625.1_11641_1_60	-	2588STDY5627574
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.88119	32.6	-	CYIY01	15	3047	2892	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2383951	GCA_001289645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/645/GCA_001289645.1_12625_5_14	-	2588STDY5748011
Salmonella enterica subsp. enterica serovar Newport str. CVM20775	1399786	PRJNA218826	218826	Proteobacteria	Gammaproteobacteria	4.91014	52.2	-	JAMP01	57	5047	4816	8/7/17	8/9/17	Scaffold	"University of Maryland, College Park"	SAMN02737307	GCA_002242275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/275/GCA_002242275.1_ASM224227v1	-	CVM20775
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04578	39.6	-	FHPJ01	27	2253	2008	2/10/16	3/13/17	Scaffold	SC	SAMEA2521530	GCA_900050335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/335/GCA_900050335.1_13414_1_74	-	2245STDY5819495
Candidatus Sulcia muelleri GWSS	444179	PRJNA19617	19617	FCB group	Bacteroidetes/Chlorobi group	0.24553	22.4	chromosome:CP000770.2	-	1	264	227	7/19/07	1/31/14	Complete Genome	University of Arizona	SAMN02604132	GCA_000017525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/017/525/GCA_000017525.1_ASM1752v1	-	GWSS
Buchnera aphidicola (Tuberolachnus salignus)	98804	PRJEB10875	320701	Proteobacteria	Gammaproteobacteria	0.430464	21.6295	chromosome 1:NZ_LN890285.1/LN890285.1; plasmid pLeu:NZ_LN890286.1/LN890286.1; plasmid pTrp:NZ_LN890287.1/LN890287.1	-	3	422	385	5/5/16	4/10/17	Complete Genome	Centre de Biologie pour la Gestion des Populations (CBGP - UMR1062)	SAMEA3598223	GCA_900016785.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/785/GCA_900016785.1_BTsPazieg1.0	-	BTs
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09361	39.5	-	FHSS01	24	2288	2065	2/10/16	3/6/17	Scaffold	SC	SAMEA2521639	GCA_900050345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/345/GCA_900050345.1_13414_2_88	-	2245STDY5819605
Salmonella enterica subsp. enterica serovar Newport str. CVM75_1280	1399776	PRJNA218813	218813	Proteobacteria	Gammaproteobacteria	5.09254	51.7	-	JAMF01	87	5249	4981	8/7/17	8/9/17	Scaffold	"University of Maryland, College Park"	SAMN02737302	GCA_002242285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/285/GCA_002242285.1_ASM224228v1	-	CVM75_1280
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.9307	32.7	-	CYNX01	63	3152	2976	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384840	GCA_001289665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/665/GCA_001289665.1_12673_5_48	-	2588STDY5748906
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87623	32.6	-	CYJW01	24	3043	2891	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2236433	GCA_001289685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/685/GCA_001289685.1_11641_1_30	-	2588STDY5627546
Salmonella enterica subsp. enterica serovar Newport str. CVM22699	1399788	PRJNA218828	218828	Proteobacteria	Gammaproteobacteria	4.96227	52.1	-	JAMR01	58	5133	4902	8/7/17	8/9/17	Scaffold	"University of Maryland, College Park"	SAMN02737312	GCA_002242295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/295/GCA_002242295.1_ASM224229v1	-	CVM22699
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.12242	39.6	-	FIUI01	60	2387	2098	2/10/16	3/6/17	Scaffold	SC	SAMEA867944	GCA_900050465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/465/GCA_900050465.1_4564_2_4	-	C14249
Escherichia coli	562	PRJEB9491	286945	Proteobacteria	Gammaproteobacteria	5.02706	50.1	chromosome I:LN877770.1	-	1	4609	4606	10/1/15	10/1/15	Chromosome	CGR	SAMEA3432775	GCA_001405275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/275/GCA_001405275.1_ERS742059	-	MC1061
Escherichia coli O157:H7 str. EC4024	444454	PRJNA27747	27747	Proteobacteria	Gammaproteobacteria	7.58677	41.9	-	ABJT01	84	-	-	2/6/08	12/5/13	Scaffold	J. Craig Venter Institute	SAMN02436231	GCA_000155005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/155/005/GCA_000155005.1_ASM15500v1	-	EC4024
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.06525	39.8	-	FIUM01	92	2274	2025	2/10/16	3/13/17	Scaffold	SC	SAMEA867765	GCA_900050485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/485/GCA_900050485.1_3850_1_10	-	C14099X
Salmonella enterica subsp. enterica serovar Newport str. CVM80_2288	1399777	PRJNA218814	218814	Proteobacteria	Gammaproteobacteria	4.87227	52.2	-	JAMG01	73	5023	4780	8/7/17	8/9/17	Scaffold	"University of Maryland, College Park"	SAMN02737300	GCA_002242305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/305/GCA_002242305.1_ASM224230v1	-	CVM80_2288
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.92295	32.7	-	CYNB01	19	3118	2964	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384677	GCA_001289705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/705/GCA_001289705.1_12673_3_75	-	2588STDY5748743
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87918	32.6	-	CYPO01	19	3020	2895	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384574	GCA_001289725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/725/GCA_001289725.1_12673_2_67	-	2588STDY5748640
Salmonella enterica subsp. enterica serovar Newport str. CVM22707	1399783	PRJNA218820	218820	Proteobacteria	Gammaproteobacteria	4.8943	52.2	-	JAMM01	50	5045	4814	8/7/17	8/9/17	Scaffold	"University of Maryland, College Park"	SAMN02737305	GCA_002242365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/365/GCA_002242365.1_ASM224236v1	-	CVM22707
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.06313	39.7	-	FIWA01	76	2257	2007	2/10/16	3/15/17	Scaffold	SC	SAMEA867768	GCA_900050505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/505/GCA_900050505.1_3850_2_2	-	D25696X
Escherichia coli 4_1_47FAA	1127356	PRJNA39385	39385	Proteobacteria	Gammaproteobacteria	5.27543	50.6	-	ACTQ01	43	5389	5306	1/19/12	8/20/13	Scaffold	Broad Institute	SAMN02299425	GCA_000243195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/243/195/GCA_000243195.1_Esch_coli_4_1_47FAA_V1	-	4_1_47FAA
Escherichia coli CAG:4	1263075	PRJEB867	206765	Proteobacteria	Gammaproteobacteria	4.68081	50.6	-	CBFX01	28	4403	4336	5/31/13	1/30/15	Scaffold	DTU	SAMEA3138535	GCA_000432955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/432/955/GCA_000432955.1_MGS4	-	-
Streptococcus pneumoniae	1313	PRJEB2098	203734	Terrabacteria group	Firmicutes	2.11005	39.5	-	FIWN01	55	2312	2075	2/10/16	3/13/17	Scaffold	SC	SAMEA807339	GCA_900050515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/515/GCA_900050515.1_4353_2_12	-	72D37909
Salmonella enterica subsp. enterica serovar Newport str. CVM18000	1399781	PRJNA218818	218818	Proteobacteria	Gammaproteobacteria	4.92913	52.1	-	JAMK01	65	5113	4857	8/7/17	8/9/17	Scaffold	"University of Maryland, College Park"	SAMN02737309	GCA_002242405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/405/GCA_002242405.1_ASM224240v1	-	CVM18000
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.8791	32.6	-	CYOC01	25	3024	2899	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384862	GCA_001289745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/745/GCA_001289745.1_12673_5_70	-	2588STDY5748928
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.92612	32.7	-	CYLT01	29	3087	2956	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384383	GCA_001289765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/765/GCA_001289765.1_12641_3_66	-	2588STDY5748448
Salmonella enterica subsp. enterica serovar Newport str. CVM22697	1399787	PRJNA218827	218827	Proteobacteria	Gammaproteobacteria	4.96709	52.1	-	JAMQ01	55	5132	4900	8/7/17	8/9/17	Scaffold	"University of Maryland, College Park"	SAMN02737313	GCA_002242435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/435/GCA_002242435.1_ASM224243v1	-	CVM22697
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.12955	39.7	-	FIWZ01	65	2378	2133	2/10/16	3/13/17	Scaffold	SC	SAMEA1033851	GCA_900050525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/525/GCA_900050525.1_6972_8_34	-	A31349
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.20151	50.4	-	JSHP01	2963	-	-	11/13/14	11/13/14	Scaffold	University of Washington	SAMN02802138	GCA_000777055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/055/GCA_000777055.1_ASM77705v1	25373147	upec-47
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.56768	50.4	-	JSHZ01	1945	-	-	11/13/14	11/13/14	Scaffold	University of Washington	SAMN02802125	GCA_000777255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/255/GCA_000777255.1_ASM77725v1	25373147	upec-35
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.98584	39.8	-	FHFS01	56	2207	1921	2/10/16	3/13/17	Scaffold	SC	SAMEA2203896	GCA_900050665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/665/GCA_900050665.1_11658_2_82	-	2245STDY5609036
Salmonella enterica subsp. enterica serovar Newport str. CVM22443	1399789	PRJNA218829	218829	Proteobacteria	Gammaproteobacteria	4.90182	52.2	-	JAMS01	51	5048	4811	8/7/17	8/9/17	Scaffold	"University of Maryland, College Park"	SAMN02737310	GCA_002242445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/445/GCA_002242445.1_ASM224244v1	-	CVM22443
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.92094	32.7	-	CYNQ01	16	3111	2962	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384824	GCA_001289785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/785/GCA_001289785.1_12673_5_32	-	2588STDY5748890
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87508	32.6	-	CYMU01	19	3017	2889	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384661	GCA_001289805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/805/GCA_001289805.1_12673_3_59	-	2588STDY5748727
Salmonella enterica subsp. enterica serovar Newport str. CVM24403	1399790	PRJNA218831	218831	Proteobacteria	Gammaproteobacteria	4.83992	52.2	-	JAMT01	46	4974	4747	8/7/17	8/9/17	Scaffold	"University of Maryland, College Park"	SAMN02737318	GCA_002242475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/475/GCA_002242475.1_ASM224247v1	-	CVM24403
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.1223	39.6	-	FHGQ01	40	2343	2116	2/10/16	3/13/17	Scaffold	SC	SAMEA2203929	GCA_900050675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/675/GCA_900050675.1_11657_8_21	-	2245STDY5609069
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	3.01655	49.1	-	JSIC01	2916	-	-	11/13/14	11/13/14	Scaffold	University of Washington	SAMN02802122	GCA_000777315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/315/GCA_000777315.1_ASM77731v1	25373147	upec-32
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	2.84257	50.5	-	JSIP01	3213	-	-	11/13/14	11/13/14	Scaffold	University of Washington	SAMN02802108	GCA_000777575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/575/GCA_000777575.1_ASM77757v1	25373147	upec-280
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06305	39.6	-	FHGW01	39	2232	2013	2/10/16	3/13/17	Scaffold	SC	SAMEA2203931	GCA_900050685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/685/GCA_900050685.1_11658_2_67	-	2245STDY5609071
Salmonella enterica subsp. enterica serovar Newport str. CVM34519	1399791	PRJNA218832	218832	Proteobacteria	Gammaproteobacteria	4.83005	52.2	-	JAMU01	75	4976	4727	8/7/17	8/9/17	Scaffold	"University of Maryland, College Park"	SAMN02737316	GCA_002242495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/495/GCA_002242495.1_ASM224249v1	-	CVM34519
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.75901	32.7	-	CYJH01	17	2879	2758	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2236463	GCA_001289825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/825/GCA_001289825.1_11641_1_62	-	2588STDY5627576
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.76186	32.7	-	CYIL01	19	2886	2756	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2236460	GCA_001289845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/845/GCA_001289845.1_11641_1_59	-	2588STDY5627573
Salmonella enterica subsp. enterica serovar Newport str. CVM18005	1399792	PRJNA218833	218833	Proteobacteria	Gammaproteobacteria	4.9287	52.1	-	JAMV01	58	5084	4846	8/7/17	8/9/17	Scaffold	"University of Maryland, College Park"	SAMN02737315	GCA_002242535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/242/535/GCA_002242535.1_ASM224253v1	-	CVM18005
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.10699	39.6	-	FHHE01	50	2308	2077	2/10/16	3/13/17	Scaffold	SC	SAMEA2203944	GCA_900050695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/695/GCA_900050695.1_11657_8_24	-	2245STDY5609084
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.00702	50.2	-	JSIW01	2612	-	-	11/13/14	11/13/14	Scaffold	University of Washington	SAMN02802098	GCA_000777715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/715/GCA_000777715.1_ASM77771v1	25373147	upec-270
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.04607	50.1	-	JSIX01	2767	-	-	11/13/14	11/13/14	Scaffold	University of Washington	SAMN02802097	GCA_000777725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/725/GCA_000777725.1_ASM77772v1	25373147	upec-27
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04687	39.8	-	FHHG01	39	2248	2021	2/10/16	3/13/17	Scaffold	SC	SAMEA2203946	GCA_900050705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/705/GCA_900050705.1_11657_8_25	-	2245STDY5609087
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	5.22763	51.9	-	NPFC01	207	5401	5098	8/22/17	8/24/17	Scaffold	U.S. Food and Drug Administration	SAMN07419982	GCA_002265465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/465/GCA_002265465.1_ASM226546v1	-	SE142
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.88711	32.6	-	CYJB01	24	3030	2898	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2236424	GCA_001289865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/865/GCA_001289865.1_11641_1_21	-	2588STDY5627537
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87218	32.6	-	CYIK01	20	3029	2891	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2236493	GCA_001289885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/885/GCA_001289885.1_11641_1_92	-	2588STDY5627606
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	5.34692	51.7	-	NPEL01	306	5571	5250	8/22/17	8/24/17	Scaffold	U.S. Food and Drug Administration	SAMN07420502	GCA_002265475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/475/GCA_002265475.1_ASM226547v1	-	SE143
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09693	39.6	-	FHIQ01	29	2338	2070	2/10/16	3/13/17	Scaffold	SC	SAMEA2204029	GCA_900050715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/715/GCA_900050715.1_11511_8_61	-	2245STDY5609170
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.68726	50.1	-	JSJE01	2026	-	-	11/13/14	11/13/14	Scaffold	University of Washington	SAMN02802089	GCA_000777925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/925/GCA_000777925.1_ASM77792v1	25373147	upec-262
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	2.38805	49.9	-	JSJU01	2779	-	-	11/13/14	11/13/14	Scaffold	University of Washington	SAMN02802072	GCA_000779115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/115/GCA_000779115.1_ASM77911v1	25373147	upec-247
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06212	39.6	-	FHNK01	28	2270	2043	2/10/16	3/6/17	Scaffold	SC	SAMEA2467727	GCA_900050725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/725/GCA_900050725.1_13154_3_48	-	2245STDY5804496
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	5.39049	51.7	-	NPEM01	221	5617	5314	8/22/17	8/24/17	Scaffold	U.S. Food and Drug Administration	SAMN07420399	GCA_002265545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/545/GCA_002265545.1_ASM226554v1	-	SE146
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.77964	32.7	-	CYIH01	18	2932	2793	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2236490	GCA_001289905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/905/GCA_001289905.1_11641_1_89	-	2588STDY5627603
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.88904	32.7	-	CYOK01	39	3070	2931	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384875	GCA_001289925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/925/GCA_001289925.1_12673_5_83	-	2588STDY5748941
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	4.90104	52.2	-	NPEO01	166	5020	4763	8/22/17	8/24/17	Scaffold	U.S. Food and Drug Administration	SAMN07420503	GCA_002265715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/715/GCA_002265715.1_ASM226571v1	-	SE1148
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06441	39.5	-	FHTP01	41	2244	2018	2/10/16	3/13/17	Scaffold	SC	SAMEA2521683	GCA_900050735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/735/GCA_900050735.1_13414_3_37	-	2245STDY5819650
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	2.26108	48.7	-	JSLO01	2655	-	-	11/13/14	11/13/14	Scaffold	University of Washington	SAMN02802017	GCA_000779415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/415/GCA_000779415.1_ASM77941v1	25373147	upec-198
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	11.2226	58.9	-	JSPL01	1060	-	-	11/13/14	11/13/14	Scaffold	University of Washington	SAMN02801898	GCA_000780515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/515/GCA_000780515.1_ASM78051v1	25373147	blood-2011-0167
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09865	39.6	-	FHUP01	38	2304	2072	2/10/16	3/13/17	Scaffold	SC	SAMEA2796602	GCA_900050745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/745/GCA_900050745.1_14673_3_4	-	2245STDY5982625
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	5.01903	52	-	NPEN01	225	5198	4913	8/22/17	8/24/17	Scaffold	U.S. Food and Drug Administration	SAMN07420504	GCA_002265755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/755/GCA_002265755.1_ASM226575v1	-	SE697
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87885	32.6	-	CYPJ01	18	3048	2899	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384551	GCA_001289945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/945/GCA_001289945.1_12673_2_44	-	2588STDY5748617
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.86067	32.6	-	CYLG01	29	2986	2867	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384249	GCA_001289965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/965/GCA_001289965.1_12641_2_27	-	2588STDY5748313
Salmonella enterica subsp. enterica serovar Stanley	192953	PRJNA396800	396800	Proteobacteria	Gammaproteobacteria	4.73232	52.2	-	NQWD01	94	4827	4575	8/25/17	8/28/17	Scaffold	Institute of Bioscience	SAMN07436714	GCA_002270495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/270/495/GCA_002270495.1_ASM227049v1	-	UPM 517
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.07791	39.7	-	FIVJ01	68	2307	2058	2/10/16	3/5/17	Scaffold	SC	SAMEA867780	GCA_900050925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/925/GCA_900050925.1_5390_6_6	-	A34030
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.54984	50	-	JSOD01	2005	-	-	11/13/14	11/13/14	Scaffold	University of Washington	SAMN02801934	GCA_000780955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/780/955/GCA_000780955.1_ASM78095v1	25373147	upec-122
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.03924	49.7	-	JSOG01	2709	-	-	11/13/14	11/13/14	Scaffold	University of Washington	SAMN02801931	GCA_000781135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/135/GCA_000781135.1_ASM78113v1	25373147	upec-12
Streptococcus pneumoniae	1313	PRJEB2098	203734	Terrabacteria group	Firmicutes	2.10368	39.7	-	FIVD01	75	2363	2134	2/10/16	3/13/17	Scaffold	SC	SAMEA807318	GCA_900050935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/935/GCA_900050935.1_4353_1_1	-	51D25796
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA396800	396800	Proteobacteria	Gammaproteobacteria	4.86434	52	-	NQWC01	107	4988	4749	8/25/17	8/28/17	Scaffold	Institute of Bioscience	SAMN07498251	GCA_002270545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/270/545/GCA_002270545.1_ASM227054v1	-	UPM 260
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.83827	32.7	-	CYKU01	16	3026	2884	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384093	GCA_001289985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/289/985/GCA_001289985.1_12625_6_61	-	2588STDY5748155
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.92161	32.7	-	CYNT01	25	3096	2957	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384822	GCA_001290005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/005/GCA_001290005.1_12673_5_30	-	2588STDY5748888
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	4.80501	52.1	-	NQWP01	204	4900	4626	8/31/17	9/2/17	Scaffold	U.S. Food and Drug Administration	SAMN07507240	GCA_002283015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/015/GCA_002283015.1_ASM228301v1	-	NCTR75
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.08572	39.7	-	FIUS01	57	2315	2077	2/10/16	3/13/17	Scaffold	SC	SAMEA1033897	GCA_900050945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/945/GCA_900050945.1_7004_3_14	-	B17789
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	3.10498	49.6	-	JSOY01	2993	-	-	11/13/14	11/13/14	Scaffold	University of Washington	SAMN02801912	GCA_000781475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/475/GCA_000781475.1_ASM78147v1	25373147	upec-102
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.21901	50	-	JSQU01	2584	-	-	11/13/14	11/13/14	Scaffold	University of Washington	SAMN02801863	GCA_000781795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/781/795/GCA_000781795.1_ASM78179v1	25373147	blood-10-0033
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0783	39.7	-	FHFY01	34	2273	2054	2/10/16	3/5/17	Scaffold	SC	SAMEA2203903	GCA_900051105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/105/GCA_900051105.1_11511_8_42	-	2245STDY5609043
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	4.82567	52.1	-	NQWR01	72	4903	4627	8/31/17	9/2/17	Scaffold	U.S. Food and Drug Administration	SAMN07507242	GCA_002283025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/025/GCA_002283025.1_ASM228302v1	-	NCTR148
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.9146	32.7	-	CYNJ01	20	3080	2954	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384787	GCA_001290025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/025/GCA_001290025.1_12673_4_90	-	2588STDY5748853
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.91736	32.7	-	CYOU01	23	3083	2950	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2445553	GCA_001290045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/045/GCA_001290045.1_12971_2_67	-	2588STDY5763904
Salmonella enterica subsp. enterica serovar Blockley	57741	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	4.83491	52.1	-	NQWU01	167	4894	4654	8/31/17	9/2/17	Scaffold	U.S. Food and Drug Administration	SAMN07508696	GCA_002283055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/055/GCA_002283055.1_ASM228305v1	-	NCTR341
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.16863	39.5	-	FHGB01	189	2376	2091	2/10/16	3/13/17	Scaffold	SC	SAMEA2203906	GCA_900051115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/115/GCA_900051115.1_11658_2_78	-	2245STDY5609046
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.66189	50.3	-	JSFW01	1979	-	-	11/13/14	11/13/14	Scaffold	University of Washington	SAMN02802188	GCA_000785245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/245/GCA_000785245.1_ASM78524v1	25373147	upec-92
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	4.13045	50.7	-	JSGT01	2740	-	-	11/13/14	11/13/14	Scaffold	University of Washington	SAMN02802165	GCA_000785265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/265/GCA_000785265.1_ASM78526v1	25373147	upec-71
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99033	39.8	-	FHGC01	44	2174	1932	2/10/16	3/13/17	Scaffold	SC	SAMEA2203911	GCA_900051125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/125/GCA_900051125.1_11658_2_76	-	2245STDY5609051
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	4.8739	52.2	-	NQWT01	247	4891	4630	8/31/17	9/2/17	Scaffold	U.S. Food and Drug Administration	SAMN07508695	GCA_002283065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/065/GCA_002283065.1_ASM228306v1	-	NCTR281
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.92018	32.7	-	CYJP01	26	3105	2954	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2236497	GCA_001290065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/065/GCA_001290065.1_11641_1_96	-	2588STDY5627610
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.88122	32.6	-	CYIV01	14	3023	2894	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2383975	GCA_001290085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/085/GCA_001290085.1_12625_5_38	-	2588STDY5748035
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	5.10076	52	-	NQWN01	974	5051	4756	8/31/17	9/2/17	Scaffold	U.S. Food and Drug Administration	SAMN07508763	GCA_002283095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/095/GCA_002283095.1_ASM228309v1	-	NCTR380
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06543	39.7	-	FHGE01	36	2256	2031	2/10/16	3/13/17	Scaffold	SC	SAMEA2203912	GCA_900051135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/135/GCA_900051135.1_11658_2_75	-	2245STDY5609052
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	3.35406	50	-	JSKX01	2799	-	-	11/13/14	11/13/14	Scaffold	University of Washington	SAMN02802037	GCA_000785315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/315/GCA_000785315.1_ASM78531v1	25373147	upec-215
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.6121	50.5	-	-	55	-	-	-	-	Scaffold	NTNU	SAMEA2593909	GCA_000936225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/225/GCA_000936225.2_FHI24	-	FHI24
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99199	39.8	-	FHGI01	49	2205	1927	2/10/16	3/15/17	Scaffold	SC	SAMEA2203920	GCA_900051145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/145/GCA_900051145.1_11658_2_71	-	2245STDY5609060
Salmonella enterica subsp. enterica serovar Virchow	48409	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	4.78715	52.3	-	NQWM01	378	4790	4518	8/31/17	9/2/17	Scaffold	U.S. Food and Drug Administration	SAMN07508765	GCA_002283105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/105/GCA_002283105.1_ASM228310v1	-	NCTR409
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.94506	32.7	-	CYKC01	76	3154	2984	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2236405	GCA_001290105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/105/GCA_001290105.1_11641_1_1	-	2588STDY5627518
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.8788	32.6	-	CYLY01	21	3025	2896	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384446	GCA_001290125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/125/GCA_001290125.1_12673_1_34	-	2588STDY5748512
Salmonella enterica subsp. enterica serovar Blockley	57741	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	4.81412	52.1	-	NQWO01	88	4882	4657	8/31/17	9/2/17	Scaffold	U.S. Food and Drug Administration	SAMN07508699	GCA_002283115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/115/GCA_002283115.1_ASM228311v1	-	NCTR361
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99223	39.8	-	FHGM01	47	2201	1944	2/10/16	3/13/17	Scaffold	SC	SAMEA2203925	GCA_900051155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/155/GCA_900051155.1_11658_2_68	-	2245STDY5609065
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.36439	50.5	-	-	44	-	-	-	-	Scaffold	NTNU	SAMEA2593946	GCA_000936475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/475/GCA_000936475.1_FHI66	-	FHI66
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.36806	50.4	-	-	47	-	-	-	-	Scaffold	NTNU	SAMEA2593938	GCA_000940355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/355/GCA_000940355.1_FHI58	-	FHI58
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.14318	39.5	-	FHGL01	27	2368	2133	2/10/16	3/13/17	Scaffold	SC	SAMEA2203926	GCA_900051165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/165/GCA_900051165.1_11657_8_20	-	2245STDY5609066
Salmonella enterica subsp. enterica serovar Anatum	58712	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	4.9118	52.1	-	NQWL01	228	5030	4772	8/31/17	9/2/17	Scaffold	U.S. Food and Drug Administration	SAMN07508816	GCA_002283125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/125/GCA_002283125.1_ASM228312v1	-	NCTR462
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.74312	32.7	-	CYKE01	14	2862	2723	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384009	GCA_001290145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/145/GCA_001290145.1_12625_5_72	-	2588STDY5748069
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87861	32.6	-	CYLQ01	16	3049	2892	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384430	GCA_001290165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/165/GCA_001290165.1_12673_1_18	-	2588STDY5748496
Salmonella enterica subsp. enterica serovar Schwarzengrund	340190	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	4.6534	52.2	-	NQWK01	162	4705	4459	8/31/17	9/2/17	Scaffold	U.S. Food and Drug Administration	SAMN07508817	GCA_002283175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/175/GCA_002283175.1_ASM228317v1	-	NCTR487
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.11507	39.6	-	FHPL01	49	2358	2116	2/10/16	3/12/17	Scaffold	SC	SAMEA2521531	GCA_900051175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/175/GCA_900051175.1_13414_1_75	-	2245STDY5819496
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.32285	50.4	-	-	159	-	-	-	-	Scaffold	NTNU	SAMEA2593923	GCA_000941835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/835/GCA_000941835.1_FHI40	-	FHI40
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.31883	50.5	-	-	30	-	-	-	-	Scaffold	NTNU	SAMEA2593942	GCA_000946435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/946/435/GCA_000946435.1_FHI62	-	FHI62
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.13252	39.6	-	FHPU01	41	2343	2104	2/10/16	3/13/17	Scaffold	SC	SAMEA2521544	GCA_900051185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/185/GCA_900051185.1_13414_1_88	-	2245STDY5819509
Salmonella enterica subsp. enterica serovar Braenderup	149391	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	4.89741	52.2	-	NQWW01	558	4918	4642	8/31/17	9/2/17	Scaffold	U.S. Food and Drug Administration	SAMN07508819	GCA_002283185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/185/GCA_002283185.1_ASM228318v1	-	NCTR730
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.91721	32.7	-	CYKZ01	18	3080	2944	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384124	GCA_001290185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/185/GCA_001290185.1_12625_6_92	-	2588STDY5748186
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.74881	32.6	-	CYLP01	20	2862	2737	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384352	GCA_001290205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/205/GCA_001290205.1_12641_3_35	-	2588STDY5748417
Salmonella enterica subsp. enterica serovar Hadar	149385	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	4.72436	52.2	-	NQWJ01	141	4769	4535	8/31/17	9/2/17	Scaffold	U.S. Food and Drug Administration	SAMN07508818	GCA_002283205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/205/GCA_002283205.1_ASM228320v1	-	NCTR488
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04431	39.7	-	FHST01	38	2248	2013	2/10/16	3/13/17	Scaffold	SC	SAMEA2521642	GCA_900051195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/195/GCA_900051195.1_13414_2_91	-	2245STDY5819608
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.58837	50.5	-	-	47	-	-	-	-	Scaffold	NTNU	SAMEA2593911	GCA_000951875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/951/875/GCA_000951875.1_FHI27	-	FHI27
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.42802	50.4	-	-	50	-	-	-	-	Scaffold	NTNU	SAMEA2593930	GCA_000951915.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/951/915/GCA_000951915.2_FHI48	-	FHI48
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0456	39.8	-	FHVE01	46	2256	2027	2/10/16	3/13/17	Scaffold	SC	SAMEA2796713	GCA_900051215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/215/GCA_900051215.1_14673_4_20	-	2245STDY5982739
Salmonella enterica subsp. enterica serovar Aberdeen	260367	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	5.1232	52	-	NQWQ01	193	5385	5002	8/31/17	9/2/17	Scaffold	U.S. Food and Drug Administration	SAMN07507241	GCA_002283215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/215/GCA_002283215.1_ASM228321v1	-	NCTR144
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87827	32.6	-	CYKT01	12	3015	2891	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384102	GCA_001290225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/225/GCA_001290225.1_12625_6_70	-	2588STDY5748164
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.90792	32.7	-	CYPL01	18	3093	2937	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384565	GCA_001290245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/245/GCA_001290245.1_12673_2_58	-	2588STDY5748631
Salmonella enterica subsp. enterica serovar Albany	211968	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	4.84987	52.1	-	NQWS01	89	4927	4669	8/31/17	9/2/17	Scaffold	U.S. Food and Drug Administration	SAMN07508694	GCA_002283235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/235/GCA_002283235.1_ASM228323v1	-	NCTR177
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.26091	39.6	-	FHVI01	64	2503	2253	2/10/16	3/5/17	Scaffold	SC	SAMEA2796717	GCA_900051225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/225/GCA_900051225.1_14673_4_24	-	2245STDY5982743
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	5.3684	50.6	-	-	42	-	-	-	-	Scaffold	NTNU	SAMEA2593977	GCA_000951935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/951/935/GCA_000951935.1_FHI99	-	FHI99
Escherichia coli	562	PRJNA257300	257300	Proteobacteria	Gammaproteobacteria	5.07989	50.5	-	LEKZ01	343	-	-	6/23/15	10/13/15	Scaffold	Institute of Biosciences of the State University of Sao Paulo (UNESP/IBB)	SAMN02950424	GCA_001038025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/025/GCA_001038025.1_ASM103802v1	26227593	EC D92/09
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.11188	39.7	-	FIVO01	97	2353	2111	2/10/16	3/5/17	Scaffold	SC	SAMEA867806	GCA_900051305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/305/GCA_900051305.1_5390_5_11	-	A28816
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	4.84479	52.2	-	NQWV01	124	4910	4638	8/31/17	9/2/17	Scaffold	U.S. Food and Drug Administration	SAMN07508698	GCA_002283275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/283/275/GCA_002283275.1_ASM228327v1	-	NCTR350
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.85501	32.7	-	CYIQ01	21	3023	2871	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2236481	GCA_001290265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/265/GCA_001290265.1_11641_1_80	-	2588STDY5627594
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.91983	32.7	-	CYNU01	23	3105	2950	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384838	GCA_001290285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/285/GCA_001290285.1_12673_5_46	-	2588STDY5748904
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89419	52.2	-	NSBZ01	64	5022	4755	9/11/17	9/13/17	Scaffold	University of California at Davis	SAMN06842961	GCA_002289225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/225/GCA_002289225.1_ASM228922v1	-	LT2
Streptococcus pneumoniae	1313	PRJEB2102	203746	Terrabacteria group	Firmicutes	2.1023	39.6	-	FIUL01	52	2332	2083	2/10/16	3/13/17	Scaffold	SC	SAMEA685593	GCA_900051315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/315/GCA_900051315.1_4525_7_7	-	C15160
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	9.28251	51	-	JRSL01	1307	-	-	10/26/15	10/26/15	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872781	GCA_001413795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/413/795/GCA_001413795.1_ASM141379v1	25501822	RU1 BHI5
Escherichia coli	562	PRJNA252010	252010	Proteobacteria	Gammaproteobacteria	9.97224	51.2	-	JRSM01	6573	-	-	10/26/15	10/26/15	Scaffold	US Army Edgewood Chemical Biological Center	SAMN02872782	GCA_001417575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/417/575/GCA_001417575.1_ASM141757v1	25501822	RU1 BHI6
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.0807	39.7	-	FIUV01	47	2314	2077	2/10/16	3/5/17	Scaffold	SC	SAMEA1033633	GCA_900051325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/325/GCA_900051325.1_7004_3_52	-	C12797a
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89691	52.2	-	NSCA01	51	5013	4762	9/11/17	9/13/17	Scaffold	University of California at Davis	SAMN06842962	GCA_002289265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/265/GCA_002289265.1_ASM228926v1	-	LT2 KO_STM1799
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.85814	32.7	-	CYMH01	18	3018	2899	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384598	GCA_001290305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/305/GCA_001290305.1_12673_2_91	-	2588STDY5748664
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.86094	32.7	-	CYJJ01	19	3045	2895	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2236420	GCA_001290325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/325/GCA_001290325.1_11641_1_17	-	2588STDY5627533
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89682	52.2	-	NSCB01	59	5016	4754	9/11/17	9/13/17	Scaffold	University of California at Davis	SAMN06842963	GCA_002289275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/289/275/GCA_002289275.1_ASM228927v1	-	LT2 KO_STM3712
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09769	39.5	-	FHHO01	39	2312	2080	2/10/16	3/12/17	Scaffold	SC	SAMEA2203994	GCA_900051395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/395/GCA_900051395.1_11658_2_56	-	2245STDY5609135
Escherichia coli K1	1392869	PRJNA257959	257959	Proteobacteria	Gammaproteobacteria	5.50769	50.4	-	JQFS01	3327	-	-	11/18/15	11/18/15	Scaffold	"Nottingham Trent University, UK"	SAMN02980965	GCA_001445715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/715/GCA_001445715.1_E_coli_k1_937	26497222	937
Escherichia coli K1	1392869	PRJNA257956	257956	Proteobacteria	Gammaproteobacteria	4.53235	51.2	-	JQFR01	4016	-	-	11/18/15	11/18/15	Scaffold	"Nottingham Trent University, UK"	SAMN02980950	GCA_001445725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/725/GCA_001445725.1_E_coli_k1_926	26497222	926
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06097	39.6	-	FHIU01	32	2254	2026	2/10/16	3/13/17	Scaffold	SC	SAMEA2204032	GCA_900051405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/405/GCA_900051405.1_11658_2_49	-	2245STDY5609173
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB7510	348516	Proteobacteria	Gammaproteobacteria	4.67194	52.2	-	CDER01	105	4819	4456	10/14/16	3/2/17	Scaffold	Yuan	SAMEA2820667	GCA_900002585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/002/585/GCA_900002585.1_St508-GX1999	-	Salmonella enterica subsp. enterica serovar Typhi St508-GX1999
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.96624	32.7	-	CYJZ01	34	3152	3016	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2383487	GCA_001290345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/345/GCA_001290345.1_12625_2_25	-	2588STDY5747542
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.92265	32.7	-	CYOD01	23	3087	2962	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384854	GCA_001290365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/365/GCA_001290365.1_12673_5_62	-	2588STDY5748920
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB7510	348516	Proteobacteria	Gammaproteobacteria	4.53327	52.2	-	CDCZ01	96	4675	4275	10/14/16	3/2/17	Scaffold	Yuan	SAMEA2820660	GCA_900002595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/002/595/GCA_900002595.1_GZ-18	-	Salmonella enterica subsp. enterica serovar Typhi GZ-18
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.1234	39.6	-	FHLE01	64	2300	2043	2/10/16	3/13/17	Scaffold	SC	SAMEA2336015	GCA_900051415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/415/GCA_900051415.1_12291_4_83	-	2245STDY5699108
Escherichia coli K1	1392869	PRJNA257955	257955	Proteobacteria	Gammaproteobacteria	5.10203	50.7	-	JQFQ01	1875	-	-	11/18/15	11/18/15	Scaffold	"Nottingham Trent University, UK"	SAMN02980949	GCA_001445735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/735/GCA_001445735.1_E_coli_k1_923	26497222	923
Escherichia coli K1	1392869	PRJNA257977	257977	Proteobacteria	Gammaproteobacteria	4.67405	51.1	-	JQFT01	2760	-	-	11/18/15	11/18/15	Scaffold	"Nottingham Trent University, UK"	SAMN02981034	GCA_001445765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/445/765/GCA_001445765.1_E_coli_k1_949	26497222	949
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09806	39.6	-	FHMO01	30	2312	2083	2/10/16	3/13/17	Scaffold	SC	SAMEA2467560	GCA_900051425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/425/GCA_900051425.1_13154_3_18	-	2245STDY5804461
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB7510	348516	Proteobacteria	Gammaproteobacteria	4.86829	52	-	CDEU01	135	5071	4703	10/14/16	3/2/17	Scaffold	Yuan	SAMEA2820662	GCA_900002605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/002/605/GCA_900002605.1_St1332-GZ2011	-	Salmonella enterica subsp. enterica serovar Typhi St1332-GZ2011
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.85108	32.6	-	CYLF01	25	2974	2857	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384233	GCA_001290385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/385/GCA_001290385.1_12641_2_11	-	2588STDY5748297
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.77111	32.7	-	CYPB01	14	2906	2769	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384471	GCA_001290405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/405/GCA_001290405.1_12673_1_59	-	2588STDY5748537
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB7510	348516	Proteobacteria	Gammaproteobacteria	4.95062	51.8	-	CDET01	150	5146	4755	10/14/16	3/2/17	Scaffold	Yuan	SAMEA2820663	GCA_900002615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/002/615/GCA_900002615.1_St1428-XJ2010	-	Salmonella enterica subsp. enterica serovar Typhi St1428-XJ2010
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.01252	39.8	-	FHNA01	57	2211	1938	2/10/16	3/6/17	Scaffold	SC	SAMEA2467579	GCA_900051435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/435/GCA_900051435.1_13154_3_35	-	2245STDY5804480
Escherichia coli	562	PRJNA306713	306713	Proteobacteria	Gammaproteobacteria	4.90689	50.7	-	LSAQ01	198	4879	4093	3/25/16	3/25/16	Scaffold	Christian Medical College	SAMN04361562	GCA_001597815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/815/GCA_001597815.1_ASM159781v1	-	CMCEC_NDM_1
Escherichia coli	562	PRJNA306714	306714	Proteobacteria	Gammaproteobacteria	4.9031	50.7	-	LSAP01	161	4907	4172	3/25/16	3/25/16	Scaffold	Christian Medical College	SAMN04361563	GCA_001597825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/825/GCA_001597825.1_ASM159782v1	-	CMCEC_NDM_2
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04768	39.8	-	FHMZ01	34	2250	2025	2/10/16	3/13/17	Scaffold	SC	SAMEA2467580	GCA_900051445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/445/GCA_900051445.1_13154_2_17	-	2245STDY5804481
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB7510	348516	Proteobacteria	Gammaproteobacteria	4.58308	52.1	-	CDOB01	98	4721	4362	10/14/16	3/2/17	Scaffold	Yuan	SAMEA2820661	GCA_900002625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/002/625/GCA_900002625.1_JX2005-56	-	JX2005-56
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.8643	32.6	-	CYNR01	21	3025	2874	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384825	GCA_001290425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/425/GCA_001290425.1_12673_5_33	-	2588STDY5748891
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.92154	32.7	-	CYOT01	26	3089	2965	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2445545	GCA_001290445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/445/GCA_001290445.1_12971_2_59	-	2588STDY5763896
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB7510	348516	Proteobacteria	Gammaproteobacteria	4.80264	52.1	-	CDNZ01	100	4978	4608	10/14/16	3/2/17	Scaffold	Yuan	SAMEA2820668	GCA_900002845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/002/845/GCA_900002845.1_St512-GX1998	-	St512-GX1998
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.97189	39.8	-	FHRP01	28	2191	1964	2/10/16	3/13/17	Scaffold	SC	SAMEA2521604	GCA_900051455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/455/GCA_900051455.1_13414_2_53	-	2245STDY5819570
Escherichia coli OP50	637912	PRJNA41499	41499	Proteobacteria	Gammaproteobacteria	4.41865	50.8	-	ADBT01	2939	-	-	11/19/09	1/8/14	Contig	"School of Biosciences, University of Birmingham"	SAMN02471599	GCA_000176815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/176/815/GCA_000176815.1_ASM17681v1	-	OP50
Escherichia coli O157:H7 str. EC4205	702435	PRJNA42819	42819	Proteobacteria	Gammaproteobacteria	5.28705	50.2	-	ADVB01	1583	-	-	5/11/10	1/8/14	Contig	National Bioforensic Analysis Center	SAMN02470603	GCA_000178775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/178/775/GCA_000178775.1_ASM17877v1	-	EC4205
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.01734	39.8	-	FHUL01	34	2212	1992	2/10/16	3/12/17	Scaffold	SC	SAMEA2796494	GCA_900051465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/465/GCA_900051465.1_14673_1_86	-	2245STDY5982515
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB7510	348516	Proteobacteria	Gammaproteobacteria	4.65654	52.2	-	CDOA01	103	4807	4441	10/14/16	3/2/17	Scaffold	Yuan	SAMEA2820665	GCA_900002855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/002/855/GCA_900002855.1_St382-GX1995	-	St382-GX1995
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87999	32.6	-	CYNI01	18	3023	2894	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384807	GCA_001290465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/465/GCA_001290465.1_12673_5_15	-	2588STDY5748873
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87489	32.6	-	CYLJ01	29	3011	2889	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384264	GCA_001290485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/485/GCA_001290485.1_12641_2_42	-	2588STDY5748328
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB7510	348516	Proteobacteria	Gammaproteobacteria	4.71432	52	-	CDOC01	88	4884	4492	10/14/16	3/2/17	Scaffold	Yuan	SAMEA2820659	GCA_900002865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/002/865/GCA_900002865.1_GX-St669	-	GX-St669
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.11384	39.6	-	FHVZ01	36	2323	2080	2/10/16	3/6/17	Scaffold	SC	SAMEA2796737	GCA_900051475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/475/GCA_900051475.1_14673_4_44	-	2245STDY5982763
Escherichia coli LT-68	670890	PRJNA40261	40261	Proteobacteria	Gammaproteobacteria	5.18943	50.8	-	ADUP01	63	5697	5568	2/10/11	2/28/12	Contig	Institute for Genome Sciences	SAMN00792443	GCA_000188815.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/188/815/GCA_000188815.2_ASM18881v2	-	LT-68
Escherichia coli O104:H4 str. LB226692	1040638	PRJNA67613	67613	Proteobacteria	Gammaproteobacteria	5.4555	50.6	-	AFOB02	356	5585	5463	6/2/11	11/19/13	Contig	Life Technologies	SAMN00623111	GCA_000215685.3	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/685/GCA_000215685.3_Ecoli.O104_H4.LB226692_2.0	21799941	LB226692
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07448	39.6	-	FHZV01	39	2277	2032	2/10/16	3/13/17	Scaffold	SC	SAMEA2152228	GCA_900051525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/525/GCA_900051525.1_10678_7_34	-	2690STDY5561777
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB7510	348516	Proteobacteria	Gammaproteobacteria	4.65486	52.2	-	CDEW01	109	4810	4445	10/14/16	3/2/17	Scaffold	Yuan	SAMEA2820666	GCA_900002875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/002/875/GCA_900002875.1_St383-GX1995	-	Salmonella enterica subsp. enterica serovar Typhi St383-GX1995
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.82597	32.7	-	CYOF01	17	2970	2853	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384859	GCA_001290505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/505/GCA_001290505.1_12673_5_67	-	2588STDY5748925
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.90308	32.7	-	CYNP01	47	3098	2930	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384815	GCA_001290525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/525/GCA_001290525.1_12673_5_23	-	2588STDY5748881
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB7510	348516	Proteobacteria	Gammaproteobacteria	4.77945	52.1	-	CDEV01	142	4942	4570	10/14/16	3/2/17	Scaffold	Yuan	SAMEA2820664	GCA_900002885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/002/885/GCA_900002885.1_St1481-XJ2012	-	Salmonella enterica subsp. enterica serovar Typhi St1481-XJ2012
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.14074	39.5	-	FIVT01	79	2372	2132	2/10/16	3/13/17	Scaffold	SC	SAMEA867798	GCA_900051605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/605/GCA_900051605.1_5362_5_6	-	A31131
Escherichia coli O104:H4 str. H112180541	1048765	PRJNA68163	68163	Proteobacteria	Gammaproteobacteria	5.05003	50.6	-	AFRO01	1376	-	-	6/23/11	1/8/14	Contig	HPA	SAMN02469878	GCA_000219155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/219/155/GCA_000219155.2_Ecoli_H112180541_1.0	-	H112180541
Escherichia coli O104:H4 str. TY-2482	1038844	PRJNA67657	67657	Proteobacteria	Gammaproteobacteria	5.42657	50.6	-	AFVS01	2641	-	-	7/27/11	1/8/14	Contig	BGI	SAMN02471597	GCA_000221905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/905/GCA_000221905.2_E.coli_0104_H4_IonTorrent_1.0	21793736	TY-2482
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.07771	39.6	-	FIXT01	75	2289	2021	2/10/16	3/15/17	Scaffold	SC	SAMEA867766	GCA_900051625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/625/GCA_900051625.1_3850_2_11	-	C14560X
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB7510	348516	Proteobacteria	Gammaproteobacteria	4.74032	52	-	CDES01	87	4895	4519	10/14/16	3/2/17	Scaffold	Yuan	SAMEA2820669	GCA_900016635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/635/GCA_900016635.1_ZJ98-11	-	Salmonella enterica subsp. enterica serovar Typhi ZJ98-11
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.92227	32.7	-	CYLV01	21	3097	2968	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384423	GCA_001290545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/545/GCA_001290545.1_12673_1_11	-	2588STDY5748489
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.74591	32.7	-	CYJL01	22	2853	2737	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2383465	GCA_001290565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/565/GCA_001290565.1_12625_2_3	-	2588STDY5747520
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.73742	52	-	FFKG01	44	4897	4537	2/9/16	3/1/17	Scaffold	SC	SAMEA2547756	GCA_900017235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/235/GCA_900017235.1_13134_1_14	-	PO_1110
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.12958	39.5	-	FIXV01	85	2290	2073	2/10/16	3/13/17	Scaffold	SC	SAMEA867800	GCA_900051635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/635/GCA_900051635.1_5362_5_2	-	A29101
Escherichia coli O104:H4 str. H112180540	1069645	PRJNA70809	70809	Proteobacteria	Gammaproteobacteria	5.27872	50.6	-	AFWB01	512	-	-	8/3/11	1/8/14	Contig	Health Protection Agency	SAMN02469877	GCA_000222525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/525/GCA_000222525.2_ASM22252v2	-	H112180540
Escherichia coli O104:H4 str. H112180283	1069643	PRJNA70805	70805	Proteobacteria	Gammaproteobacteria	5.33586	50.6	-	AFWC01	274	-	-	8/3/11	1/8/14	Contig	Health Protection Agency	SAMN02469875	GCA_000222545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/222/545/GCA_000222545.2_ASM22254v2	-	H112180283
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99026	39.8	-	FHJI01	52	2204	1935	2/10/16	3/13/17	Scaffold	SC	SAMEA2335958	GCA_900051825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/825/GCA_900051825.1_12291_4_26	-	2245STDY5699051
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.72847	52	-	FFKJ01	42	4900	4535	2/9/16	3/1/17	Scaffold	SC	SAMEA2547762	GCA_900017245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/245/GCA_900017245.1_13134_1_20	-	PO_1232
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87839	32.6	-	CYIM01	27	3016	2887	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2236477	GCA_001290585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/585/GCA_001290585.1_11641_1_76	-	2588STDY5627590
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.92007	32.7	-	CYMJ01	22	3112	2958	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384590	GCA_001290605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/605/GCA_001290605.1_12673_2_83	-	2588STDY5748656
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.70113	52.1	-	FFLN01	41	4859	4501	2/9/16	3/1/17	Scaffold	SC	SAMEA2603191	GCA_900017255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/255/GCA_900017255.1_13566_1_55	-	3135STDY5861337
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.10018	39.6	-	FHPF01	35	2335	2086	2/10/16	3/13/17	Scaffold	SC	SAMEA2521525	GCA_900051835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/835/GCA_900051835.1_13414_1_69	-	2245STDY5819490
Escherichia coli TOP291	1286333	PRJNA187034	187034	Proteobacteria	Gammaproteobacteria	5.18992	50.4	-	AOQF01	145	-	-	5/16/13	5/16/13	Contig	"National University of Singapore, Genome Institute of Singapore"	SAMN01894012	GCA_000397305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/305/GCA_000397305.1_Ec13_E2U1_TOP291_120714	23658245	TOP291
Escherichia coli TOP293-1	1286334	PRJNA187034	187034	Proteobacteria	Gammaproteobacteria	4.96182	50.6	-	AOQG01	298	-	-	5/16/13	5/16/13	Contig	"National University of Singapore, Genome Institute of Singapore"	SAMN01894013	GCA_000397325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/325/GCA_000397325.1_Ec13_E2F1_TOP293-1_120714	23658245	TOP293-1
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.07382	39.6	-	FHTD01	25	2270	2055	2/10/16	3/18/17	Scaffold	SC	SAMEA2521656	GCA_900051845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/845/GCA_900051845.1_13414_3_10	-	2245STDY5819623
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91068	51.9	-	FFKZ01	46	5109	4741	2/9/16	3/1/17	Scaffold	SC	SAMEA2603128	GCA_900018595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/595/GCA_900018595.1_13566_1_26	-	3135STDY5861304
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.8481	32.6	-	CYPD01	22	2986	2870	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384542	GCA_001290625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/625/GCA_001290625.1_12673_2_35	-	2588STDY5748608
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.83242	32.6	-	CYMZ01	18	2978	2825	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384671	GCA_001290645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/645/GCA_001290645.1_12673_3_69	-	2588STDY5748737
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91281	51.9	-	FFLA01	47	5121	4747	2/9/16	3/1/17	Scaffold	SC	SAMEA2603133	GCA_900018605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/605/GCA_900018605.1_13566_1_28	-	3135STDY5861306
Streptococcus pneumoniae	1313	PRJEB2098	203734	Terrabacteria group	Firmicutes	2.157	39.5	-	FIXH01	64	2394	2162	2/10/16	3/13/17	Scaffold	SC	SAMEA807258	GCA_900052015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/015/GCA_900052015.1_4350_6_5	-	80C15291
Escherichia coli TOP293-2	1286335	PRJNA187034	187034	Proteobacteria	Gammaproteobacteria	5.49778	50.5	-	AOQH01	177	-	-	5/16/13	5/16/13	Contig	"National University of Singapore, Genome Institute of Singapore"	SAMN01894014	GCA_000397345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/345/GCA_000397345.1_Ec13_E2F2_TOP293-2_120714	23658245	TOP293-2
Escherichia coli TOP293-3	1286336	PRJNA187034	187034	Proteobacteria	Gammaproteobacteria	5.49948	50.6	-	AOQI01	345	-	-	5/16/13	5/16/13	Contig	"National University of Singapore, Genome Institute of Singapore"	SAMN01894015	GCA_000397365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/365/GCA_000397365.1_Ec13_E2F3_TOP293-3_120714	23658245	TOP293-3
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.06114	39.7	-	FIXQ01	76	2241	2044	2/10/16	3/5/17	Scaffold	SC	SAMEA867913	GCA_900052025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/025/GCA_900052025.1_5390_2_11	-	B14721
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.73358	52.1	-	FFLB01	45	4903	4550	2/9/16	3/1/17	Scaffold	SC	SAMEA2603144	GCA_900018615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/615/GCA_900018615.1_13566_1_33	-	3135STDY5861312
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.93971	32.7	-	CYKA01	34	3127	2986	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2236414	GCA_001290665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/665/GCA_001290665.1_11641_1_11	-	2588STDY5627527
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87958	32.6	-	CYPC01	17	3026	2897	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384543	GCA_001290685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/685/GCA_001290685.1_12673_2_36	-	2588STDY5748609
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.9531	51.9	-	FFLO01	44	5153	4776	2/9/16	3/1/17	Scaffold	SC	SAMEA2603200	GCA_900018625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/625/GCA_900018625.1_13566_1_59	-	3135STDY5861342
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.14938	39.6	-	FIZA01	78	2386	2138	2/10/16	3/13/17	Scaffold	SC	SAMEA867854	GCA_900052045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/045/GCA_900052045.1_5362_5_7	-	B10027
Escherichia coli TOP293-4	1286337	PRJNA187034	187034	Proteobacteria	Gammaproteobacteria	5.45716	50.5	-	AOQJ01	504	-	-	5/16/13	5/16/13	Contig	"National University of Singapore, Genome Institute of Singapore"	SAMN01894016	GCA_000397385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/385/GCA_000397385.1_Ec13_E2F4_TOP293-4_120714	23658245	TOP293-4
Escherichia coli TOP498	1286338	PRJNA187034	187034	Proteobacteria	Gammaproteobacteria	5.09306	50.4	-	AOQK01	150	-	-	5/16/13	5/16/13	Contig	"National University of Singapore, Genome Institute of Singapore"	SAMN01894017	GCA_000397405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/405/GCA_000397405.1_Ec13_E3U1_TOP498_120714	23658245	TOP498
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99385	39.8	-	FHLF01	43	2190	1937	2/10/16	3/13/17	Scaffold	SC	SAMEA2336016	GCA_900052135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/135/GCA_900052135.1_12291_4_84	-	2245STDY5699109
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91034	51.9	-	FFLZ01	54	5138	4702	2/9/16	3/1/17	Scaffold	SC	SAMEA2603253	GCA_900018635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/635/GCA_900018635.1_13566_1_82	-	3135STDY5861368
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.85975	32.7	-	CYKL01	14	3026	2873	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384077	GCA_001290705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/705/GCA_001290705.1_12625_6_45	-	2588STDY5748139
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87567	32.7	-	CYKP01	30	3058	2892	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384070	GCA_001290725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/725/GCA_001290725.1_12625_6_38	-	2588STDY5748132
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91078	51.9	-	FFNP01	47	5132	4760	2/9/16	3/1/17	Scaffold	SC	SAMEA2603192	GCA_900018645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/645/GCA_900018645.1_14555_2_62	-	3135STDY5861243
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.15232	39.7	-	FHMH01	205	2370	2096	2/10/16	3/12/17	Scaffold	SC	SAMEA2467542	GCA_900052145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/145/GCA_900052145.1_13091_6_91	-	2245STDY5804442
Escherichia coli TOP550-1	1286339	PRJNA187034	187034	Proteobacteria	Gammaproteobacteria	5.62319	50.5	-	AOQL01	314	-	-	5/16/13	5/16/13	Contig	"National University of Singapore, Genome Institute of Singapore"	SAMN01894018	GCA_000397425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/425/GCA_000397425.1_Ec13_E3F1_TOP550-1_120714	23658245	TOP550-1
Escherichia coli TOP2515	1286347	PRJNA187034	187034	Proteobacteria	Gammaproteobacteria	4.05955	51.1	-	AOQT01	2560	-	-	5/16/13	5/16/13	Contig	"National University of Singapore, Genome Institute of Singapore"	SAMN01894026	GCA_000397585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/397/585/GCA_000397585.1_Ec72_E2U1_TOP2515_120714	23658245	TOP2515
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.05649	39.5	-	FHQB01	39	2281	2029	2/10/16	3/12/17	Scaffold	SC	SAMEA2521552	GCA_900052165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/165/GCA_900052165.1_13414_2_1	-	2245STDY5819518
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91071	51.9	-	FFNV01	50	5124	4747	2/9/16	3/1/17	Scaffold	SC	SAMEA2603206	GCA_900018655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/655/GCA_900018655.1_14555_2_70	-	3135STDY5861251
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.92209	32.7	-	CYLC01	21	3071	2960	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2383882	GCA_001290745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/745/GCA_001290745.1_12641_1_40	-	2588STDY5747941
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87333	32.6	-	CYMO01	19	3018	2894	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384636	GCA_001290765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/765/GCA_001290765.1_12673_3_34	-	2588STDY5748702
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.73678	52	-	FFOH01	41	4897	4544	2/9/16	3/1/17	Scaffold	SC	SAMEA2603243	GCA_900018665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/665/GCA_900018665.1_14555_2_91	-	3135STDY5861272
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.17688	39.5	-	FHTF01	49	2428	2196	2/10/16	3/13/17	Scaffold	SC	SAMEA2521664	GCA_900052175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/175/GCA_900052175.1_13414_3_18	-	2245STDY5819631
Escherichia coli O104:H21 str. CFSAN002237	1335304	PRJNA203401	203401	Proteobacteria	Gammaproteobacteria	4.92929	50.6	-	AUQB01	198	4540	3816	9/6/13	10/24/13	Contig	FDA	SAMN02147038	GCA_000464915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/915/GCA_000464915.1_CFSAN002237_01.0	24092795	CFSAN002237
Escherichia coli DORA_A_5_14_21	1403943	PRJNA221488	221488	Proteobacteria	Gammaproteobacteria	5.63789	50.0979	plasmid pECABPL_DORA_A_5_14_21:AZLZ01002924.1	AZLZ01	2924	7363	7363	12/16/13	12/16/13	Contig	"University of California, Berkeley"	SAMN02316559	GCA_000508685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/685/GCA_000508685.1_Ecoli_DORA_A_5_14_21_velvet_1.1	-	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08747	39.8	-	FHGG01	43	2315	2082	2/10/16	3/13/17	Scaffold	SC	SAMEA2203918	GCA_900052385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/385/GCA_900052385.1_11658_2_72	-	2245STDY5609058
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.69975	52.1	-	FFKU01	39	4856	4498	2/9/16	3/1/17	Scaffold	SC	SAMEA2603100	GCA_900022555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/555/GCA_900022555.1_13566_1_13	-	3135STDY5861289
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87385	32.6	-	CYOX01	29	3016	2892	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2445632	GCA_001290785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/785/GCA_001290785.1_12971_3_51	-	2588STDY5763984
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.88057	32.6	-	CYLU01	20	3050	2888	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384422	GCA_001290805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/805/GCA_001290805.1_12673_1_10	-	2588STDY5748488
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91111	51.9	-	FFND01	48	5126	4744	2/9/16	3/1/17	Scaffold	SC	SAMEA2603164	GCA_900022565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/565/GCA_900022565.1_14555_2_47	-	3135STDY5861228
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.25406	39.7	-	FHGN01	345	2422	2121	2/10/16	3/13/17	Scaffold	SC	SAMEA2203919	GCA_900052395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/395/GCA_900052395.1_11511_8_45	-	2245STDY5609059
Escherichia coli ISC11	1432557	PRJEB4816	232422	Proteobacteria	Gammaproteobacteria	4.97687	51.8	-	CBWP01	97	-	6140	1/2/14	1/30/15	Contig	AIT	SAMEA3138850	GCA_000529265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/265/GCA_000529265.1_ISC11v1	-	ISC11
Escherichia coli ISC41	1432559	PRJEB4818	232417	Proteobacteria	Gammaproteobacteria	5.31813	50.7	-	CBWR01	121	-	6210	1/2/14	1/30/15	Contig	AIT	SAMEA3138858	GCA_000529555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/555/GCA_000529555.1_ISC41v1	-	ISC41
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.13534	39.5	-	FHJA01	34	2349	2114	2/10/16	3/13/17	Scaffold	SC	SAMEA2335950	GCA_900052405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/405/GCA_900052405.1_12291_4_18	-	2245STDY5699043
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91178	51.9	-	FFLD01	44	5118	4739	2/9/16	3/1/17	Scaffold	SC	SAMEA2603157	GCA_900024935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/935/GCA_900024935.1_13566_1_39	-	3135STDY5861319
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.92798	32.7	-	CYKK01	16	3087	2953	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384076	GCA_001290825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/825/GCA_001290825.1_12625_6_44	-	2588STDY5748138
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87914	32.6	-	CYNZ01	20	3024	2893	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384847	GCA_001290845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/845/GCA_001290845.1_12673_5_55	-	2588STDY5748913
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.73239	52.1	-	FFNE01	43	4907	4549	2/9/16	3/1/17	Scaffold	SC	SAMEA2603166	GCA_900024945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/945/GCA_900024945.1_14555_2_48	-	3135STDY5861229
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99014	39.8	-	FHNM01	47	2189	1931	2/10/16	3/13/17	Scaffold	SC	SAMEA2467730	GCA_900052415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/415/GCA_900052415.1_13154_3_51	-	2245STDY5804499
Escherichia coli ISC56	1432560	PRJEB4819	232426	Proteobacteria	Gammaproteobacteria	5.55129	56.6	-	CBWT01	1186	-	5828	1/2/14	1/30/15	Contig	AIT	SAMEA3138866	GCA_000529815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/815/GCA_000529815.1_ISC56v1	-	ISC56
Escherichia coli ISC7	1432555	PRJEB4814	232413	Proteobacteria	Gammaproteobacteria	5.18496	50.6	-	CBWN01	196	-	6258	1/2/14	1/30/15	Contig	AIT	SAMEA3138867	GCA_000529855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/529/855/GCA_000529855.1_ISC7v1	-	ISC7
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.1947	39.7	-	FHOP01	252	2404	2113	2/10/16	3/13/17	Scaffold	SC	SAMEA2467768	GCA_900052425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/425/GCA_900052425.1_13154_3_89	-	2245STDY5804537
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91129	51.9	-	FFNF01	47	5122	4744	2/9/16	3/1/17	Scaffold	SC	SAMEA2603168	GCA_900024955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/024/955/GCA_900024955.1_14555_2_49	-	3135STDY5861230
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.85879	32.6	-	CYIX01	18	2999	2874	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2236432	GCA_001290865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/865/GCA_001290865.1_11641_1_29	-	2588STDY5627545
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.73668	32.7	-	CYPA01	20	2841	2730	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2445664	GCA_001290885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/885/GCA_001290885.1_12971_3_83	-	2588STDY5764016
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91079	51.9	-	FFJP01	50	5121	4751	2/9/16	3/1/17	Scaffold	SC	SAMEA2547720	GCA_900029285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/285/GCA_900029285.1_13097_1_74	-	PO_30
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.10934	39.4	-	FHPD01	69	2288	2030	2/10/16	3/6/17	Scaffold	SC	SAMEA2521521	GCA_900052435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/435/GCA_900052435.1_13414_1_65	-	2245STDY5819486
Escherichia coli DSM 30083 = JCM 1649 = ATCC 11775	866789	PRJDB552	243135	Proteobacteria	Gammaproteobacteria	4.90411	50.6	-	BAIM01	80	-	-	4/1/14	9/15/15	Contig	The University of Tokyo	SAMD00000764	GCA_000613265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/265/GCA_000613265.1_ASM61326v1	-	JCM 1649
Escherichia coli JCM 18426	1236522	PRJDB610	243185	Proteobacteria	Gammaproteobacteria	5.21776	50.3	-	BAKT01	237	-	-	4/1/14	9/16/15	Contig	The University of Tokyo	SAMD00004155	GCA_000614425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/425/GCA_000614425.1_ASM61442v1	-	JCM 18426
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06047	39.5	-	FHPM01	35	2276	2036	2/10/16	3/15/17	Scaffold	SC	SAMEA2521534	GCA_900052445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/445/GCA_900052445.1_13414_1_78	-	2245STDY5819499
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91815	51.9	-	FFJW01	44	5131	4758	2/9/16	3/1/17	Scaffold	SC	SAMEA2547744	GCA_900029295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/295/GCA_900029295.1_13103_1_2	-	PO_771
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.92826	32.7	-	CYKI01	25	3127	2964	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384052	GCA_001290905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/905/GCA_001290905.1_12625_6_20	-	2588STDY5748114
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.8784	32.6	-	CYML01	23	3029	2898	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384604	GCA_001290925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/925/GCA_001290925.1_12673_3_2	-	2588STDY5748670
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.9107	51.9	-	FFKD01	53	5126	4752	2/9/16	3/1/17	Scaffold	SC	SAMEA2547754	GCA_900029305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/305/GCA_900029305.1_13103_1_12	-	PO_1101
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08062	39.7	-	FHSO01	34	2297	2061	2/10/16	3/5/17	Scaffold	SC	SAMEA2521634	GCA_900052455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/455/GCA_900052455.1_13414_2_83	-	2245STDY5819600
Escherichia coli JCM 20135	1236524	PRJDB612	243190	Proteobacteria	Gammaproteobacteria	4.96417	50.6	-	BAKV01	84	-	-	4/1/14	9/15/15	Contig	The University of Tokyo	SAMD00016759	GCA_000614505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/505/GCA_000614505.1_ASM61450v1	-	JCM 20135
Escherichia coli JCM 5491	1236527	PRJDB615	243193	Proteobacteria	Gammaproteobacteria	5.11859	50.4	-	BAKY01	136	-	-	4/1/14	9/16/15	Contig	The University of Tokyo	SAMD00009346	GCA_000614625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/625/GCA_000614625.1_ASM61462v1	-	JCM 5491
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99212	39.8	-	FHSU01	42	2199	1934	2/10/16	3/13/17	Scaffold	SC	SAMEA2521641	GCA_900052465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/465/GCA_900052465.1_13414_2_90	-	2245STDY5819607
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.92052	51.9	-	FFKI01	43	5137	4767	2/9/16	3/1/17	Scaffold	SC	SAMEA2547760	GCA_900029315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/315/GCA_900029315.1_13134_1_18	-	PO_1210
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.92923	32.6	-	CYPI01	21	3093	2969	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384538	GCA_001290945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/945/GCA_001290945.1_12673_2_31	-	2588STDY5748604
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.88482	32.6	-	CYKW01	22	3051	2898	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384094	GCA_001290965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/965/GCA_001290965.1_12625_6_62	-	2588STDY5748156
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91815	51.9	-	FFKL01	43	5141	4766	2/9/16	3/1/17	Scaffold	SC	SAMEA2547763	GCA_900029325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/029/325/GCA_900029325.1_13134_1_21	-	PO_1242
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04615	39.8	-	FHVB01	41	2253	2022	2/10/16	3/13/17	Scaffold	SC	SAMEA2796712	GCA_900052475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/475/GCA_900052475.1_14673_4_19	-	2245STDY5982738
Escherichia coli O113:H21 str. 07-4224	1446543	PRJNA218110	218110	Proteobacteria	Gammaproteobacteria	5.07526	50.7	-	JHOB01	73	4852	4694	4/7/14	8/19/14	Contig	CDC	SAMN02352889	GCA_000617105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/617/105/GCA_000617105.1_Ec07-4224	25103754	Jul-24
Escherichia coli	562	PRJNA251896	251896	Proteobacteria	Gammaproteobacteria	5.3138	50.7	-	JNOE01	460	5200	4553	8/15/14	8/15/14	Contig	Santa Clara University	SAMN02841127	GCA_000740545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/545/GCA_000740545.1_ASM74054v1	-	CS01
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04171	39.6	-	FHVC01	43	2204	1997	2/10/16	3/13/17	Scaffold	SC	SAMEA2796714	GCA_900052485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/485/GCA_900052485.1_14673_4_21	-	2245STDY5982740
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.69932	52.1	-	FFKQ01	39	4862	4504	2/9/16	3/1/17	Scaffold	SC	SAMEA2603081	GCA_900031555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/555/GCA_900031555.1_13566_1_4	-	3135STDY5861280
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.92104	32.7	-	CYKN01	16	3083	2960	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384068	GCA_001290985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/290/985/GCA_001290985.1_12625_6_36	-	2588STDY5748130
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87515	32.6	-	CYLD01	27	2998	2892	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2383914	GCA_001291005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/005/GCA_001291005.1_12641_1_72	-	2588STDY5747973
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.70136	52.1	-	FFKV01	40	4859	4502	2/9/16	3/1/17	Scaffold	SC	SAMEA2603102	GCA_900031565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/565/GCA_900031565.1_13566_1_14	-	3135STDY5861290
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.08877	39.6	-	FITX01	48	2330	2083	2/10/16	3/13/17	Scaffold	SC	SAMEA1033914	GCA_900052545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/545/GCA_900052545.1_7004_3_15	-	B17998
Escherichia coli	562	PRJNA251897	251897	Proteobacteria	Gammaproteobacteria	5.23273	50.7	-	JNOF01	278	5007	4405	8/15/14	2/3/15	Contig	Santa Clara University	SAMN02841128	GCA_000740555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/555/GCA_000740555.1_ASM74055v1	25477397	CS02
Escherichia coli	562	PRJNA251902	251902	Proteobacteria	Gammaproteobacteria	5.09823	50.7	-	JNOI01	245	4886	4422	8/15/14	2/3/15	Contig	Santa Clara University	SAMN02841131	GCA_000740565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/565/GCA_000740565.1_ASM74056v1	25477397	CS05
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.06075	39.7	-	FIVC01	74	2291	2047	2/10/16	3/13/17	Scaffold	SC	SAMEA867911	GCA_900052565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/565/GCA_900052565.1_5390_3_2	-	B14935
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.72274	52.1	-	FFLC01	42	4898	4548	2/9/16	3/1/17	Scaffold	SC	SAMEA2603148	GCA_900031575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/575/GCA_900031575.1_13566_1_35	-	3135STDY5861314
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.86025	32.7	-	CYNW01	19	3029	2910	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384843	GCA_001291025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/025/GCA_001291025.1_12673_5_51	-	2588STDY5748909
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.91697	32.7	-	CYIN01	23	3082	2959	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2236457	GCA_001291045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/045/GCA_001291045.1_11641_1_56	-	2588STDY5627570
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.83483	52.1	-	FFLT01	52	5015	4624	2/9/16	3/1/17	Scaffold	SC	SAMEA2603218	GCA_900031585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/585/GCA_900031585.1_13566_1_67	-	3135STDY5861351
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.1111	39.5	-	FIXA01	63	2317	2063	2/10/16	3/13/17	Scaffold	SC	SAMEA867925	GCA_900052575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/575/GCA_900052575.1_5390_8_6	-	D30716
Escherichia coli	562	PRJNA251903	251903	Proteobacteria	Gammaproteobacteria	5.59069	50.6	-	JNOJ01	409	5353	4693	8/15/14	8/15/14	Contig	Santa Clara University	SAMN02841133	GCA_000740615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/615/GCA_000740615.1_ASM74061v1	-	CS06
Escherichia coli	562	PRJNA251898	251898	Proteobacteria	Gammaproteobacteria	5.00218	50.7	-	JNOG01	228	4852	4270	8/15/14	2/3/15	Contig	Santa Clara University	SAMN02841129	GCA_000740625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/740/625/GCA_000740625.1_ASM74062v1	25477397	CS03
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.09327	39.5	-	FIWW01	80	2303	2079	2/10/16	3/13/17	Scaffold	SC	SAMEA867909	GCA_900052595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/595/GCA_900052595.1_5390_3_4	-	B15188
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.69401	52.1	-	FFNX01	44	4856	4510	2/9/16	3/1/17	Scaffold	SC	SAMEA2603210	GCA_900031595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/595/GCA_900031595.1_14555_2_72	-	3135STDY5861253
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87362	32.6	-	CYLM01	23	3020	2895	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384367	GCA_001291065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/065/GCA_001291065.1_12641_3_50	-	2588STDY5748432
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.88652	32.7	-	CYII01	23	3073	2926	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2236415	GCA_001291085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/085/GCA_001291085.1_11641_1_12	-	2588STDY5627528
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.73728	52	-	FFNY01	44	4900	4545	2/9/16	3/1/17	Scaffold	SC	SAMEA2603212	GCA_900031605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/605/GCA_900031605.1_14555_2_73	-	3135STDY5861254
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.16018	39.6	-	FIXF01	90	2398	2125	2/10/16	3/8/17	Scaffold	SC	SAMEA867770	GCA_900052615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/615/GCA_900052615.1_3850_2_12	-	D26316X
Escherichia coli O157:H7 str. 09BKT002497	1387072	PRJNA215274	215274	Proteobacteria	Gammaproteobacteria	5.0729	50.2	-	JJOJ01	1744	-	-	9/3/14	10/29/14	Contig	National Veterinary Institute (SVA)	SAMN02317211	GCA_000747505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/747/505/GCA_000747505.1_O157_09BKT002497_454	25143581	09BKT002497
Escherichia coli	562	PRJNA246239	246239	Proteobacteria	Gammaproteobacteria	5.13881	50.7	-	JNNK01	115	4896	4419	9/5/14	9/9/14	Contig	California Department of Public Health	SAMN02744160	GCA_000749525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/749/525/GCA_000749525.1_ASM74952v1	-	S.93
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.02096	39.8	-	FHGU01	33	2222	1988	2/10/16	3/5/17	Scaffold	SC	SAMEA2203935	GCA_900052685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/685/GCA_900052685.1_11511_8_48	-	2245STDY5609075
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.90935	51.9	-	FFNZ01	45	5119	4746	2/9/16	3/1/17	Scaffold	SC	SAMEA2603215	GCA_900031615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/615/GCA_900031615.1_14555_2_75	-	3135STDY5861256
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87857	32.6	-	CYPQ01	17	3050	2895	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384573	GCA_001291105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/105/GCA_001291105.1_12673_2_66	-	2588STDY5748639
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.83351	32.7	-	CYJX01	30	2966	2851	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2236450	GCA_001291125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/125/GCA_001291125.1_11641_1_49	-	2588STDY5627563
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91006	51.9	-	FFOB01	47	5129	4742	2/9/16	3/1/17	Scaffold	SC	SAMEA2603223	GCA_900031625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/625/GCA_900031625.1_14555_2_79	-	3135STDY5861260
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99208	39.8	-	FHHW01	45	2195	1928	2/10/16	3/13/17	Scaffold	SC	SAMEA2203997	GCA_900052695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/695/GCA_900052695.1_11657_4_50	-	2245STDY5609138
Escherichia coli E851/71	670898	PRJNA40277	40277	Proteobacteria	Gammaproteobacteria	5.72063	50.2	-	ALNX01	137	-	-	9/11/14	9/11/14	Contig	Institute for Genome Sciences	SAMN03025772	GCA_000754045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/754/045/GCA_000754045.1_ASM75404v1	-	E851/71
Escherichia coli O139:H28 str. E24377A	331111	PRJNA272763	272763	Proteobacteria	Gammaproteobacteria	4.9012	50.8	-	JXRF01	453	4936	4068	2/3/15	4/15/15	Contig	Datar Genetics Limited	SAMN03287301	GCA_000832005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/832/005/GCA_000832005.1_ASM83200v1	25838484	E24377A
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.1405	39.6	-	FHHT01	38	2364	2126	2/10/16	3/13/17	Scaffold	SC	SAMEA2203999	GCA_900052705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/705/GCA_900052705.1_11511_8_53	-	2245STDY5609140
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91002	51.9	-	FFOC01	47	5127	4760	2/9/16	3/1/17	Scaffold	SC	SAMEA2603227	GCA_900031635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/031/635/GCA_900031635.1_14555_2_81	-	3135STDY5861262
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.77002	32.6	-	CYJA01	21	2887	2763	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2236474	GCA_001291145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/145/GCA_001291145.1_11641_1_73	-	2588STDY5627587
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.95349	32.6	-	CYKM01	20	3125	2986	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384062	GCA_001291165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/165/GCA_001291165.1_12625_6_30	-	2588STDY5748124
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.72926	52.1	-	FFKH01	42	4902	4537	2/9/16	3/1/17	Scaffold	SC	SAMEA2547755	GCA_900033705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/705/GCA_900033705.1_13103_1_13	-	PO_1102
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.98578	39.7	-	FHHV01	27	2185	1958	2/10/16	3/6/17	Scaffold	SC	SAMEA2204001	GCA_900052715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/715/GCA_900052715.1_11657_4_51	-	2245STDY5609142
Escherichia coli	562	PRJEB8306	276436	Proteobacteria	Gammaproteobacteria	5.8341	50.3	-	CDRK01	1455	-	-	2/24/15	2/24/15	Contig	CGS-GL	SAMEA3218058	GCA_000936005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/005/GCA_000936005.1_80B_L1_assembly	-	80B_L1
Escherichia coli	562	PRJEB8306	276436	Proteobacteria	Gammaproteobacteria	8.05711	51	-	CDQS01	2117	-	-	2/24/15	2/24/15	Contig	CGS-GL	SAMEA3218076	GCA_000936165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/165/GCA_000936165.1_E7C3_assembly	-	E7C3
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.17815	39.6	-	FHHY01	54	2410	2176	2/10/16	3/5/17	Scaffold	SC	SAMEA2204004	GCA_900052725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/725/GCA_900052725.1_11679_1_52	-	2245STDY5609145
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91111	51.9	-	FFMU01	45	5112	4744	2/9/16	3/1/17	Scaffold	SC	SAMEA2603136	GCA_900033715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/715/GCA_900033715.1_14555_2_32	-	3135STDY5861213
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.9009	32.7	-	CYOQ01	17	3070	2944	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2445525	GCA_001291185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/185/GCA_001291185.1_12971_2_39	-	2588STDY5763876
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.91752	32.7	-	CYKB01	17	3079	2954	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2383993	GCA_001291205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/205/GCA_001291205.1_12625_5_56	-	2588STDY5748053
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.73243	52.1	-	FFNR01	43	4913	4558	2/9/16	3/1/17	Scaffold	SC	SAMEA2603196	GCA_900033725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/725/GCA_900033725.1_14555_2_64	-	3135STDY5861245
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04445	39.6	-	FHIA01	36	2258	2014	2/10/16	3/6/17	Scaffold	SC	SAMEA2204005	GCA_900052735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/735/GCA_900052735.1_11658_2_54	-	2245STDY5609146
Escherichia coli	562	PRJEB5989	276424	Proteobacteria	Gammaproteobacteria	7.18677	51.3	-	CCBV01	2457	-	-	2/24/15	2/24/15	Contig	CGS-GL	SAMEA2469784	GCA_000936365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/365/GCA_000936365.1_Ec207A_L1_MIRA_assembly	-	-
Escherichia coli	562	PRJEB8306	276436	Proteobacteria	Gammaproteobacteria	9.26042	51.2	-	CDQW01	2816	-	-	2/24/15	2/24/15	Contig	CGS-GL	SAMEA3218074	GCA_000936715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/715/GCA_000936715.1_E8C1_assembly	-	E8C1
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.05339	39.6	-	FHMK01	33	2248	2012	2/10/16	3/6/17	Scaffold	SC	SAMEA2467549	GCA_900052745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/745/GCA_900052745.1_13154_3_7	-	2245STDY5804450
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.72015	52	-	FFNT01	42	4895	4520	2/9/16	3/1/17	Scaffold	SC	SAMEA2603199	GCA_900033735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/735/GCA_900033735.1_14555_2_66	-	3135STDY5861247
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.92026	32.7	-	CYPH01	22	3085	2962	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384629	GCA_001291225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/225/GCA_001291225.1_12673_3_27	-	2588STDY5748695
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.9193	32.7	-	CYNC01	25	3090	2953	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384684	GCA_001291245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/245/GCA_001291245.1_12673_3_82	-	2588STDY5748750
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91159	51.9	-	FFNG01	46	5127	4753	2/9/16	3/1/17	Scaffold	SC	SAMEA2603171	GCA_900035565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/565/GCA_900035565.1_14555_2_51	-	3135STDY5861232
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04904	39.6	-	FHQC01	16	2261	2030	2/10/16	3/13/17	Scaffold	SC	SAMEA2521553	GCA_900052755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/755/GCA_900052755.1_13414_2_2	-	2245STDY5819519
Escherichia coli	562	PRJEB8306	276436	Proteobacteria	Gammaproteobacteria	6.94975	51.1	-	CDQU01	1730	-	-	2/24/15	2/24/15	Contig	CGS-GL	SAMEA3218075	GCA_000936775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/936/775/GCA_000936775.1_B7C5_assembly	-	B7C5
Escherichia coli	562	PRJEB5989	276424	Proteobacteria	Gammaproteobacteria	6.5734	51.3	-	CCCC01	2003	-	-	2/24/15	2/24/15	Contig	CGS-GL	SAMEA2469789	GCA_000937575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/575/GCA_000937575.1_Ec138B_L1_MIRA_assembly	-	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0992	39.5	-	FHTU01	40	2319	2088	2/10/16	3/6/17	Scaffold	SC	SAMEA2796418	GCA_900052765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/765/GCA_900052765.1_14673_1_10	-	2245STDY5982439
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.72218	52.1	-	FFNI01	44	4892	4547	2/9/16	3/1/17	Scaffold	SC	SAMEA2603175	GCA_900035575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/575/GCA_900035575.1_14555_2_53	-	3135STDY5861234
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.83142	32.7	-	CYLH01	38	2957	2844	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384241	GCA_001291265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/265/GCA_001291265.1_12641_2_19	-	2588STDY5748305
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87948	32.6	-	CYPE01	20	3050	2894	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384523	GCA_001291285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/285/GCA_001291285.1_12673_2_16	-	2588STDY5748589
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.73047	52.1	-	FFKF01	39	4892	4539	2/9/16	3/1/17	Scaffold	SC	SAMEA2547758	GCA_900036285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/285/GCA_900036285.1_13134_1_16	-	PO_1131
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.98911	39.8	-	FHWA01	51	2186	1926	2/10/16	3/13/17	Scaffold	SC	SAMEA2796736	GCA_900052775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/775/GCA_900052775.1_14673_4_43	-	2245STDY5982762
Escherichia coli	562	PRJEB5989	276424	Proteobacteria	Gammaproteobacteria	8.04196	51	-	CCCH01	2094	-	-	2/24/15	2/24/15	Contig	CGS-GL	SAMEA2469797	GCA_000937975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/937/975/GCA_000937975.1_Ec57A_E7C3_MIRA_assembly	-	-
Escherichia coli	562	PRJEB8306	276436	Proteobacteria	Gammaproteobacteria	9.03047	51.2	-	CDQN01	2606	-	-	2/24/15	2/24/15	Contig	CGS-GL	SAMEA3218077	GCA_000938575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/938/575/GCA_000938575.1_D1C4_assembly	-	D1C4
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07711	39.6	-	FIDM01	32	2271	2028	2/10/16	3/13/17	Scaffold	SC	SAMEA2144891	GCA_900052815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/815/GCA_900052815.1_10702_5_49	-	2690STDY5561669
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91129	51.9	-	FFKP01	47	5129	4760	2/9/16	3/1/17	Scaffold	SC	SAMEA2603080	GCA_900036295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/295/GCA_900036295.1_13566_1_3	-	3135STDY5861279
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.79739	32.7	-	CYLN01	22	2935	2824	9/3/15	3/5/17	Scaffold	WTSI	SAMEA2384391	GCA_001291305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/305/GCA_001291305.1_12641_3_74	-	2588STDY5748456
Staphylococcus aureus	1280	PRJEB10598	294552	Terrabacteria group	Firmicutes	2.87864	32.6	-	CYMN01	20	3021	2894	9/4/15	3/5/17	Scaffold	WTSI	SAMEA2384624	GCA_001291325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/291/325/GCA_001291325.1_12673_3_22	-	2588STDY5748690
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.69801	52.1	-	FFKW01	44	4851	4505	2/9/16	3/1/17	Scaffold	SC	SAMEA2603117	GCA_900036305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/305/GCA_900036305.1_13566_1_21	-	3135STDY5861298
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.15183	39.7	-	FIXU01	49	2390	2151	2/10/16	3/5/17	Scaffold	SC	SAMEA1033547	GCA_900052895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/895/GCA_900052895.1_7004_3_18	-	B18210a
Escherichia coli	562	PRJEB5989	276424	Proteobacteria	Gammaproteobacteria	9.09341	51	-	CCCD01	2585	-	-	2/24/15	2/24/15	Contig	CGS-GL	SAMEA2469793	GCA_000939215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/939/215/GCA_000939215.1_Ec57A_A7_MIRA_assembly	-	-
Escherichia coli	562	PRJEB5989	276424	Proteobacteria	Gammaproteobacteria	5.75405	50.3	-	CCBU01	1387	-	-	2/24/15	2/24/15	Contig	CGS-GL	SAMEA2469783	GCA_000940615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/940/615/GCA_000940615.1_Ec80B_L1_MIRA_assembly	-	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.13588	39.6	-	FHKJ01	57	2369	2106	2/10/16	3/12/17	Scaffold	SC	SAMEA2335989	GCA_900052965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/965/GCA_900052965.1_12291_4_57	-	2245STDY5699082
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.69243	52.1	-	FFMA01	43	4864	4480	2/9/16	3/1/17	Scaffold	SC	SAMEA2603254	GCA_900036315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/315/GCA_900036315.1_13566_1_83	-	3135STDY5861369
Staphylococcus aureus	1280	PRJNA283747	283747	Terrabacteria group	Firmicutes	2.84947	32.7	-	LFNJ01	51	3021	2861	9/23/15	3/5/17	Scaffold	"Noguchi Memorial Institute for Medical Research, University of Ghana"	SAMN03658591	GCA_001297315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/315/GCA_001297315.1_ASM129731v1	26360794	BU_G1905_t3
Staphylococcus aureus	1280	PRJNA283747	283747	Terrabacteria group	Firmicutes	2.76767	32.7	-	LFOH01	37	2858	2689	9/23/15	3/5/17	Scaffold	"Noguchi Memorial Institute for Medical Research, University of Ghana"	SAMN03658604	GCA_001297375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/375/GCA_001297375.1_ASM129737v1	26360794	BU_G1074_t4
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	5.00707	51.8	-	FFMP01	50	5254	4876	2/9/16	3/1/17	Scaffold	SC	SAMEA2603127	GCA_900036325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/325/GCA_900036325.1_14555_2_27	-	3135STDY5861208
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.05083	39.7	-	FHKL01	39	2252	2029	2/10/16	3/13/17	Scaffold	SC	SAMEA2335990	GCA_900052975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/975/GCA_900052975.1_12291_4_58	-	2245STDY5699083
Escherichia coli	562	PRJEB5989	276424	Proteobacteria	Gammaproteobacteria	6.99322	51.1	-	CCCF01	1750	-	-	2/24/15	2/24/15	Contig	CGS-GL	SAMEA2469796	GCA_000941435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/941/435/GCA_000941435.1_Ec57A_B7C5_MIRA_assembly	-	-
Escherichia coli	562	PRJEB5989	276424	Proteobacteria	Gammaproteobacteria	9.28307	51.2	-	CCCK01	2841	-	-	2/24/15	2/24/15	Contig	CGS-GL	SAMEA2469795	GCA_000944435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/435/GCA_000944435.1_Ec57A_E8C1_MIRA_assembly	-	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99099	39.8	-	FHLV01	44	2197	1930	2/10/16	3/13/17	Scaffold	SC	SAMEA2336075	GCA_900052985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/985/GCA_900052985.1_12291_5_53	-	2245STDY5699170
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.68247	52.1	-	FFMQ01	38	4835	4481	2/9/16	3/1/17	Scaffold	SC	SAMEA2603129	GCA_900036335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/335/GCA_900036335.1_14555_2_28	-	3135STDY5861209
Staphylococcus aureus	1280	PRJNA283747	283747	Terrabacteria group	Firmicutes	2.75992	32.7	-	LFNP01	36	2835	2686	9/23/15	3/5/17	Scaffold	"Noguchi Memorial Institute for Medical Research, University of Ghana"	SAMN03658598	GCA_001297535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/535/GCA_001297535.1_ASM129753v1	26360794	BU_G1201_t13
Staphylococcus aureus	1280	PRJNA283747	283747	Terrabacteria group	Firmicutes	2.8277	32.7	-	LFNS01	45	2955	2747	9/23/15	3/5/17	Scaffold	"Noguchi Memorial Institute for Medical Research, University of Ghana"	SAMN03658601	GCA_001297555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/297/555/GCA_001297555.1_ASM129755v1	26360794	BU_N22_t6
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.76764	52.1	-	FFMR01	46	4923	4562	2/9/16	3/1/17	Scaffold	SC	SAMEA2603131	GCA_900036345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/345/GCA_900036345.1_14555_2_29	-	3135STDY5861210
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06205	39.7	-	FHNB01	67	2259	2036	2/10/16	3/12/17	Scaffold	SC	SAMEA2467713	GCA_900052995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/995/GCA_900052995.1_13154_3_36	-	2245STDY5804482
Escherichia coli	562	PRJEB8306	276436	Proteobacteria	Gammaproteobacteria	6.55384	51.3	-	CDRN01	2006	-	-	2/24/15	2/24/15	Contig	CGS-GL	SAMEA3218061	GCA_000944855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/944/855/GCA_000944855.1_138B_L1_assembly	-	138B_L1
Escherichia coli	562	PRJEB5989	276424	Proteobacteria	Gammaproteobacteria	6.27529	51.1	-	CCCB01	1667	-	-	2/24/15	2/24/15	Contig	CGS-GL	SAMEA2469785	GCA_000945835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/835/GCA_000945835.1_Ec207A_L2_MIRA_assembly	-	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08789	39.8	-	FHNG01	41	2312	2079	2/10/16	3/13/17	Scaffold	SC	SAMEA2467722	GCA_900053005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/005/GCA_900053005.1_13154_3_43	-	2245STDY5804491
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91187	51.9	-	FFMT01	48	5123	4762	2/9/16	3/1/17	Scaffold	SC	SAMEA2603134	GCA_900036355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/355/GCA_900036355.1_14555_2_31	-	3135STDY5861212
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92198	32.6	-	CFRG01	44	3095	2945	3/15/15	3/5/17	Scaffold	SC	SAMEA1324601	GCA_001352215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/352/215/GCA_001352215.1_7738_4_60	-	USFL341
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.8782	32.6	-	CGEF01	42	3020	2876	3/15/15	3/5/17	Scaffold	SC	SAMEA1466497	GCA_001353815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/353/815/GCA_001353815.1_7907_4_53	-	USFL146
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91245	51.9	-	FFMY01	46	5127	4748	2/9/16	3/1/17	Scaffold	SC	SAMEA2603149	GCA_900036365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/365/GCA_900036365.1_14555_2_39	-	3135STDY5861220
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04608	39.8	-	FHNH01	41	2239	2017	2/10/16	3/13/17	Scaffold	SC	SAMEA2467723	GCA_900053015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/015/GCA_900053015.1_13154_3_44	-	2245STDY5804492
Escherichia coli	562	PRJEB5989	276424	Proteobacteria	Gammaproteobacteria	8.97315	51.2	-	CCCJ01	2540	-	-	2/24/15	2/24/15	Contig	CGS-GL	SAMEA2469798	GCA_000945895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/945/895/GCA_000945895.1_Ec57A_D1C4_MIRA_assembly	-	-
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	7.6872	44.4	-	JUNF01	1115	-	-	7/10/15	7/13/16	Contig	University of Washington	SAMN03198147	GCA_001059375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/059/375/GCA_001059375.1_ASM105937v1	26230489	929.rep2_ECOL
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06571	39.6	-	FHOK01	22	2281	2036	2/10/16	3/13/17	Scaffold	SC	SAMEA2467763	GCA_900053025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/025/GCA_900053025.1_13154_3_84	-	2245STDY5804532
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91007	51.9	-	FFNA01	45	5114	4737	2/9/16	3/1/17	Scaffold	SC	SAMEA2603156	GCA_900036375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/375/GCA_900036375.1_14555_2_43	-	3135STDY5861224
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.91723	32.7	-	CFQK01	37	3086	2952	3/15/15	3/5/17	Scaffold	SC	SAMEA1466520	GCA_001354075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/075/GCA_001354075.1_7907_4_85	-	USFL177
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.8811	32.6	-	CIFU01	24	3032	2898	4/21/15	3/5/17	Scaffold	SC	SAMEA1710077	GCA_001354315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/315/GCA_001354315.1_9266_1_8	-	FL362
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.9117	51.9	-	FFNB01	46	5113	4742	2/9/16	3/1/17	Scaffold	SC	SAMEA2603158	GCA_900036385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/385/GCA_900036385.1_14555_2_44	-	3135STDY5861225
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09425	39.5	-	FHRH01	23	2290	2061	2/10/16	3/13/17	Scaffold	SC	SAMEA2521595	GCA_900053035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/035/GCA_900053035.1_13414_2_44	-	2245STDY5819561
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	8.85682	53.5	-	JUNK01	8025	-	-	7/10/15	7/13/16	Contig	University of Washington	SAMN03198142	GCA_001075925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/075/925/GCA_001075925.1_ASM107592v1	26230489	924_ECOL
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	0.56715	51.3	-	CYEJ01	1	511	503	8/22/15	9/30/15	Contig	SC	SAMEA1531060	GCA_001283245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/245/GCA_001283245.1_8205_3_46	-	300073
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.11642	39.5	-	FHRI01	37	2320	2079	2/10/16	3/13/17	Scaffold	SC	SAMEA2521597	GCA_900053045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/045/GCA_900053045.1_13414_2_46	-	2245STDY5819563
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91803	51.9	-	FFJZ01	48	5137	4759	2/9/16	3/1/17	Scaffold	SC	SAMEA2547748	GCA_900036745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/745/GCA_900036745.1_13103_1_6	-	PO_919
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88902	32.6	-	CVJS01	25	3037	2902	4/2/15	3/5/17	Scaffold	SC	SAMEA1710089	GCA_001354335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/335/GCA_001354335.1_9266_1_3	-	FL357
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.91963	32.6	-	CHEX01	52	3105	2970	4/21/15	3/5/17	Scaffold	SC	SAMEA1710090	GCA_001354355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/355/GCA_001354355.1_9235_1_6	-	FL381
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.96573	51.9	-	FFKX01	53	5187	4807	2/9/16	3/1/17	Scaffold	SC	SAMEA2603109	GCA_900036755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/755/GCA_900036755.1_13566_1_17	-	3135STDY5861294
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04444	39.6	-	FHRM01	33	2256	2018	2/10/16	3/13/17	Scaffold	SC	SAMEA2521602	GCA_900053055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/055/GCA_900053055.1_13414_2_51	-	2245STDY5819568
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	0.951382	50.4	-	CYEL01	3	893	880	8/22/15	9/30/15	Contig	SC	SAMEA1531014	GCA_001283625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/625/GCA_001283625.1_8205_3_53	-	401686
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	0.391326	51.3	-	CYEP01	1	372	358	8/22/15	9/30/15	Contig	SC	SAMEA1531007	GCA_001284645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/645/GCA_001284645.1_8205_3_54	-	401907
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.00847	39.7	-	FHRN01	25	2188	1974	2/10/16	3/6/17	Scaffold	SC	SAMEA2521607	GCA_900053065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/065/GCA_900053065.1_13414_2_56	-	2245STDY5819573
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91119	51.9	-	FFLL01	47	5120	4752	2/9/16	3/1/17	Scaffold	SC	SAMEA2603187	GCA_900036765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/765/GCA_900036765.1_13566_1_53	-	3135STDY5861335
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.88073	32.6	-	CFLI01	59	3053	2936	3/15/15	3/5/17	Scaffold	SC	SAMEA1710092	GCA_001354375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/375/GCA_001354375.1_9235_1_7	-	FL382
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.91034	32.6	-	CFPJ01	84	3090	2958	3/15/15	3/5/17	Scaffold	SC	SAMEA1710098	GCA_001354395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/395/GCA_001354395.1_9235_1_5	-	FL380
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91181	51.9	-	FFLM01	46	5123	4746	2/9/16	3/1/17	Scaffold	SC	SAMEA2603189	GCA_900036775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/775/GCA_900036775.1_13566_1_54	-	3135STDY5861336
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.07626	39.5	-	FHSH01	29	2253	2018	2/10/16	3/13/17	Scaffold	SC	SAMEA2521624	GCA_900053075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/075/GCA_900053075.1_13414_2_73	-	2245STDY5819590
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	1.32671	50.2	-	CYEH01	5	1239	1226	8/22/15	9/30/15	Contig	SC	SAMEA1531054	GCA_001284685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/685/GCA_001284685.1_8205_3_45	-	103151
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	1.81139	50.8	-	CYED01	8	1730	1709	8/22/15	9/30/15	Contig	SC	SAMEA1531062	GCA_001284965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/965/GCA_001284965.1_8205_3_39	-	702797
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.98723	39.8	-	FHSQ01	52	2191	1929	2/10/16	3/13/17	Scaffold	SC	SAMEA2521635	GCA_900053085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/085/GCA_900053085.1_13414_2_84	-	2245STDY5819601
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91229	51.9	-	FFLQ01	48	5114	4740	2/9/16	3/1/17	Scaffold	SC	SAMEA2603202	GCA_900036785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/785/GCA_900036785.1_13566_1_60	-	3135STDY5861343
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.8653	32.6	-	CHET01	98	3011	2887	4/21/15	3/5/17	Scaffold	SC	SAMEA1710100	GCA_001354415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/415/GCA_001354415.1_9235_1_3	-	FL378
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92253	32.6	-	CHER01	70	3131	2973	4/21/15	3/5/17	Scaffold	SC	SAMEA1710107	GCA_001354455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/455/GCA_001354455.1_9235_1_13	-	FL388
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.912	51.9	-	FFLR01	48	5129	4756	2/9/16	3/1/17	Scaffold	SC	SAMEA2603205	GCA_900036795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/795/GCA_900036795.1_13566_1_61	-	3135STDY5861344
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.01698	39.6	-	FHTM01	39	2212	1990	2/10/16	3/13/17	Scaffold	SC	SAMEA2521675	GCA_900053095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/095/GCA_900053095.1_13414_3_29	-	2245STDY5819642
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	1.73354	50.7	-	CYEC01	5	1605	1583	8/22/15	9/30/15	Contig	SC	SAMEA1531070	GCA_001285385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/385/GCA_001285385.1_8205_3_38	-	702971
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	0.455856	49.7	-	CYEI01	1	439	434	8/22/15	9/30/15	Contig	SC	SAMEA1531058	GCA_001285545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/545/GCA_001285545.1_8205_3_44	-	703273
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.08175	39.6	-	FIUR01	72	2316	2075	2/10/16	3/13/17	Scaffold	SC	SAMEA1034005	GCA_900053245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/245/GCA_900053245.1_7004_3_93	-	D27102
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.69899	52.1	-	FFLS01	42	4854	4500	2/9/16	3/1/17	Scaffold	SC	SAMEA2603216	GCA_900036805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/805/GCA_900036805.1_13566_1_66	-	3135STDY5861350
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.91724	32.6	-	CFPS01	68	3090	2962	3/15/15	3/5/17	Scaffold	SC	SAMEA1710108	GCA_001354475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/475/GCA_001354475.1_9235_1_11	-	FL386
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.92466	32.6	-	CFPC01	63	3119	2984	3/15/15	3/5/17	Scaffold	SC	SAMEA1710109	GCA_001354495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/495/GCA_001354495.1_9235_1_12	-	FL387
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.73085	52.1	-	FFLV01	43	4912	4538	2/9/16	3/1/17	Scaffold	SC	SAMEA2603236	GCA_900036815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/815/GCA_900036815.1_13566_1_74	-	3135STDY5861359
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.02197	39.9	-	FIVV01	94	2195	1931	2/10/16	3/12/17	Scaffold	SC	SAMEA867793	GCA_900053255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/255/GCA_900053255.1_3850_8_8	-	B16221X
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	0.604556	50.5	-	CYEG01	2	574	570	8/22/15	9/30/15	Contig	SC	SAMEA1531028	GCA_001285925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/925/GCA_001285925.1_8205_3_41	-	703128
Escherichia coli	562	PRJEB8306	276436	Proteobacteria	Gammaproteobacteria	9.07862	51	-	CDRO01	2591	-	-	2/24/15	3/15/15	Contig	CGS-GL	SAMEA3218059	GCA_001373195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/195/GCA_001373195.1_57A_A7_assembly	-	57A_A7
Streptococcus pneumoniae	1313	PRJEB2098	203734	Terrabacteria group	Firmicutes	2.05324	39.6	-	FIWQ01	55	2258	2008	2/10/16	3/13/17	Scaffold	SC	SAMEA807334	GCA_900053275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/275/GCA_900053275.1_4353_2_3	-	70C13260
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.69902	52.1	-	FFLW01	43	4850	4492	2/9/16	3/1/17	Scaffold	SC	SAMEA2603240	GCA_900036825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/825/GCA_900036825.1_13566_1_76	-	3135STDY5861361
Staphylococcus aureus	1280	PRJEB2870	204456	Terrabacteria group	Firmicutes	2.77224	32.7	-	CVJT01	29	2896	2754	4/2/15	3/5/17	Scaffold	SC	SAMEA1710112	GCA_001354515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/354/515/GCA_001354515.1_9266_1_1	-	FL355
Staphylococcus aureus	1280	PRJNA264198	264198	Terrabacteria group	Firmicutes	2.94756	32.7	-	JTKN01	38	3128	2995	4/18/16	3/6/17	Scaffold	"Department of Technology, Metropolitan University College (Copenhagen, Denmark)"	SAMN03120277	GCA_001623025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/623/025/GCA_001623025.1_ASM162302v1	27199912	1680
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.90541	51.9	-	FFME01	46	5121	4747	2/9/16	3/1/17	Scaffold	SC	SAMEA2603099	GCA_900036835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/835/GCA_900036835.1_14555_2_12	-	3135STDY5861193
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.07887	39.6	-	FIWX01	93	2283	2044	2/10/16	3/5/17	Scaffold	SC	SAMEA867878	GCA_900053285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/285/GCA_900053285.1_5362_6_9	-	D28166
Escherichia coli	562	PRJEB8306	276436	Proteobacteria	Gammaproteobacteria	6.27044	51	-	CDRT01	1667	-	-	2/24/15	3/15/15	Contig	CGS-GL	SAMEA3218064	GCA_001373215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/373/215/GCA_001373215.1_207A_L2_assembly	-	207A_L2
Escherichia coli	562	PRJNA306781	306781	Proteobacteria	Gammaproteobacteria	5.13835	50.8	-	LRDD01	28	5173	4662	3/4/16	3/4/16	Contig	University of Idaho	SAMN04393375	GCA_001580255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/580/255/GCA_001580255.1_ASM158025v1	-	DV130
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.1868	39.5	-	FIXB01	61	2432	2185	2/10/16	3/12/17	Scaffold	SC	SAMEA867881	GCA_900053295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/295/GCA_900053295.1_5390_6_1	-	A33308
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.90943	51.9	-	FFMW01	49	5114	4743	2/9/16	3/1/17	Scaffold	SC	SAMEA2603145	GCA_900036845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/845/GCA_900036845.1_14555_2_37	-	3135STDY5861218
Staphylococcus aureus subsp. aureus	46170	PRJNA309497	309497	Terrabacteria group	Firmicutes	2.69299	32.6	-	LRNE01	131	2773	2677	5/4/16	3/6/17	Scaffold	University of Liege	SAMN04435219	GCA_001636535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/636/535/GCA_001636535.1_DDA_SA_141	26931384	141
Staphylococcus aureus subsp. aureus	46170	PRJNA309486	309486	Terrabacteria group	Firmicutes	2.72088	32.8	-	LRMX01	108	2818	2661	5/4/16	3/6/17	Scaffold	University of Liege	SAMN04435203	GCA_001639755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/755/GCA_001639755.1_ASM163975v1	26931384	strain 19
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91114	51.9	-	FFNU01	45	5124	4747	2/9/16	3/1/17	Scaffold	SC	SAMEA2603201	GCA_900036855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/855/GCA_900036855.1_14555_2_67	-	3135STDY5861248
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.16261	39.5	-	FIWU01	32	2396	2157	2/10/16	3/13/17	Scaffold	SC	SAMEA1033759	GCA_900053305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/305/GCA_900053305.1_7004_3_19	-	B18340
Escherichia coli EPEC11	670895	PRJNA40271	40271	Proteobacteria	Gammaproteobacteria	5.39342	50.5	-	AKYH01	167	-	-	3/31/16	3/31/16	Contig	Institute for Genome Sciences	SAMN04595035	GCA_001605745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/605/745/GCA_001605745.1_ASM160574v1	23858472	EPEC11
Escherichia coli	562	PRJNA287722	287722	Proteobacteria	Gammaproteobacteria	4.72351	50.7	-	LNZS01	123	4682	4096	4/6/16	4/6/16	Contig	Universidade Federal do Rio Grande do Sul	SAMN03785468	GCA_001611705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/705/GCA_001611705.1_ASM161170v1	-	1099F
Streptococcus pneumoniae	1313	PRJEB2098	203734	Terrabacteria group	Firmicutes	2.12861	39.6	-	FIYS01	62	2369	2151	2/10/16	3/5/17	Scaffold	SC	SAMEA807327	GCA_900053325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/325/GCA_900053325.1_4353_1_4	-	57C10300
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91047	51.9	-	FFOG01	50	5111	4740	2/9/16	3/1/17	Scaffold	SC	SAMEA2603241	GCA_900036865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/865/GCA_900036865.1_14555_2_90	-	3135STDY5861271
Staphylococcus aureus subsp. aureus	46170	PRJNA309488	309488	Terrabacteria group	Firmicutes	2.6489	32.7	-	LRMY01	50	2733	2529	5/4/16	3/6/17	Scaffold	University of Liege	SAMN04435206	GCA_001639785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/785/GCA_001639785.1_DDA_SA_299	26931384	299
Staphylococcus aureus subsp. aureus	46170	PRJNA309494	309494	Terrabacteria group	Firmicutes	2.64247	32.8	-	LRNB01	53	2692	2482	5/4/16	3/6/17	Scaffold	University of Liege	SAMN04435212	GCA_001639825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/825/GCA_001639825.1_DDA_SA_685	26931384	685
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.73166	52.1	-	FFOJ01	44	4906	4558	2/9/16	3/1/17	Scaffold	SC	SAMEA2603250	GCA_900036875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/875/GCA_900036875.1_14555_2_95	-	3135STDY5861276
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.01019	39.7	-	FHHJ01	31	2220	1979	2/10/16	3/15/17	Scaffold	SC	SAMEA2203953	GCA_900053495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/495/GCA_900053495.1_11658_8_4	-	2245STDY5609094
Escherichia coli	562	PRJNA287725	287725	Proteobacteria	Gammaproteobacteria	4.98229	50.8	-	LNZV01	81	4908	4321	4/6/16	4/6/16	Contig	Universidade Federal do Rio Grande do Sul	SAMN03785491	GCA_001611715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/715/GCA_001611715.1_ASM161171v1	-	2610F
Escherichia coli	562	PRJNA287723	287723	Proteobacteria	Gammaproteobacteria	5.3904	50.6	-	LNZU01	137	5452	4700	4/6/16	4/6/16	Contig	Universidade Federal do Rio Grande do Sul	SAMN03785490	GCA_001611725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/611/725/GCA_001611725.1_ASM161172v1	-	1326F
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.11611	39.5	-	FHHK01	32	2291	2066	2/10/16	3/13/17	Scaffold	SC	SAMEA2203954	GCA_900053505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/505/GCA_900053505.1_11679_1_43	-	2245STDY5609095
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.55958	52.2	-	FFMH01	42	4698	4356	2/9/16	3/1/17	Scaffold	SC	SAMEA2603105	GCA_900037575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/575/GCA_900037575.1_14555_2_15	-	3135STDY5861196
Staphylococcus aureus subsp. aureus	46170	PRJNA309493	309493	Terrabacteria group	Firmicutes	2.6041	32.8	-	LRNA01	92	2638	2499	5/4/16	3/6/17	Scaffold	University of Liege	SAMN04435211	GCA_001639835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/835/GCA_001639835.1_DDA_SA_682	26931384	682
Staphylococcus aureus subsp. aureus	46170	PRJNA309495	309495	Terrabacteria group	Firmicutes	2.77991	32.6	-	LRNC01	49	2875	2739	5/4/16	3/6/17	Scaffold	University of Liege	SAMN04435213	GCA_001639865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/865/GCA_001639865.1_DDA_SA_663	26931384	663
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.72138	52.1	-	FFMI01	41	4891	4546	2/9/16	3/1/17	Scaffold	SC	SAMEA2603107	GCA_900037585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/585/GCA_900037585.1_14555_2_16	-	3135STDY5861197
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08385	39.5	-	FHIE01	31	2249	2013	2/10/16	3/13/17	Scaffold	SC	SAMEA2204010	GCA_900053515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/515/GCA_900053515.1_11679_1_54	-	2245STDY5609151
Escherichia coli	562	PRJNA262859	262859	Proteobacteria	Gammaproteobacteria	5.19175	50.7	-	JUDW01	147	5316	4566	4/25/16	4/25/16	Contig	RIPCM	SAMN03247593	GCA_001630825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/630/825/GCA_001630825.1_ASM163082v1	-	RCE02
Escherichia coli	562	PRJNA262859	262859	Proteobacteria	Gammaproteobacteria	4.53447	50.6	-	JUDX01	54	4432	3625	4/25/16	4/25/16	Contig	RIPCM	SAMN03247596	GCA_001630835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/630/835/GCA_001630835.1_ASM163083v1	-	RCE03
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09592	39.5	-	FHIJ01	56	2324	2031	2/10/16	3/13/17	Scaffold	SC	SAMEA2204019	GCA_900053525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/525/GCA_900053525.1_11658_2_51	-	2245STDY5609160
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.76661	52.1	-	FFMG01	43	4929	4565	2/9/16	3/1/17	Scaffold	SC	SAMEA2603103	GCA_900038085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/085/GCA_900038085.1_14555_2_14	-	3135STDY5861195
Staphylococcus aureus subsp. aureus	46170	PRJNA309496	309496	Terrabacteria group	Firmicutes	2.72967	32.7	-	LRND01	70	2827	2653	5/4/16	3/6/17	Scaffold	University of Liege	SAMN04435214	GCA_001639885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/885/GCA_001639885.1_DDA_SA_674	26931384	674
Staphylococcus aureus	1280	PRJNA316797	316797	Terrabacteria group	Firmicutes	3.04157	32.6	-	LWAK01	77	3244	3062	5/25/16	3/6/17	Scaffold	"Laboratory of Medical Microbiology, University of Antwerpen"	SAMN04620659	GCA_001652195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/652/195/GCA_001652195.1_ASM165219v1	-	NMR02
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91027	51.9	-	FFLY01	47	5097	4735	2/9/16	3/1/17	Scaffold	SC	SAMEA2603251	GCA_900039615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/615/GCA_900039615.1_13566_1_81	-	3135STDY5861367
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.12377	39.6	-	FHJQ01	25	2364	2134	2/10/16	3/13/17	Scaffold	SC	SAMEA2335968	GCA_900053535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/535/GCA_900053535.1_12291_4_36	-	2245STDY5699061
Escherichia coli	562	PRJNA262859	262859	Proteobacteria	Gammaproteobacteria	5.06319	50.6	-	JUDY01	284	5256	4473	4/25/16	4/25/16	Contig	RIPCM	SAMN03247764	GCA_001630845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/630/845/GCA_001630845.1_ASM163084v1	-	RCE04
Escherichia coli	562	PRJNA262859	262859	Proteobacteria	Gammaproteobacteria	4.9184	50.5	-	JUDV01	213	5071	4101	4/25/16	4/25/16	Contig	RIPCM	SAMN03247562	GCA_001630855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/630/855/GCA_001630855.1_ASM163085v1	-	RCE01
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.10027	39.5	-	FHKQ01	53	2305	2055	2/10/16	3/13/17	Scaffold	SC	SAMEA2335996	GCA_900053545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/545/GCA_900053545.1_12291_4_64	-	2245STDY5699089
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91143	51.9	-	FFLX01	49	5114	4753	2/9/16	3/1/17	Scaffold	SC	SAMEA2603249	GCA_900039625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/625/GCA_900039625.1_13566_1_80	-	3135STDY5861366
Staphylococcus aureus	1280	PRJNA316431	316431	Terrabacteria group	Firmicutes	2.78253	32.7	-	LXFD01	39	2921	2765	6/6/16	3/6/17	Scaffold	Alliance de Recherche sur les Maladies Infectieuses Nantes-Angers (ARMINA)	SAMN04579987	GCA_001658065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/658/065/GCA_001658065.1_ASM165806v1	-	FP_SA_ST25
Staphylococcus aureus	1280	PRJNA324673	324673	Terrabacteria group	Firmicutes	2.87828	32.8	-	LZQL01	62	3021	2847	9/15/16	3/6/17	Scaffold	Universidade do Estado do Rio de Janeiro	SAMN05213228	GCA_001726145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/726/145/GCA_001726145.1_ASM172614v1	-	MRSA 10152
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.90875	51.9	-	FFML01	49	5117	4752	2/9/16	3/1/17	Scaffold	SC	SAMEA2603114	GCA_900040035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/035/GCA_900040035.1_14555_2_20	-	3135STDY5861201
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.12164	39.4	-	FHMJ01	65	2315	2056	2/10/16	3/13/17	Scaffold	SC	SAMEA2467554	GCA_900053555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/555/GCA_900053555.1_13154_3_12	-	2245STDY5804455
Escherichia coli	562	PRJNA262859	262859	Proteobacteria	Gammaproteobacteria	4.9895	50.5	-	JWJZ01	151	5049	3605	4/25/16	4/25/16	Contig	RIPCM	SAMN03254658	GCA_001630905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/630/905/GCA_001630905.1_ASM163090v1	-	RCE05
Escherichia coli	562	PRJNA262859	262859	Proteobacteria	Gammaproteobacteria	5.30528	50.7	-	JWKA01	259	5486	4688	4/25/16	4/25/16	Contig	RIPCM	SAMN03254660	GCA_001630915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/630/915/GCA_001630915.1_ASM163091v1	-	RCE06
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.98826	39.7	-	FHSG01	26	2184	1954	2/10/16	3/12/17	Scaffold	SC	SAMEA2521622	GCA_900053565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/565/GCA_900053565.1_13414_2_71	-	2245STDY5819588
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.95225	51.9	-	FFNH01	43	5166	4768	2/9/16	3/1/17	Scaffold	SC	SAMEA2603173	GCA_900040045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/045/GCA_900040045.1_14555_2_52	-	3135STDY5861233
Staphylococcus aureus	1280	PRJNA319366	319366	Terrabacteria group	Firmicutes	2.97244	32.8	-	MIZH01	493	2978	2787	9/24/16	3/6/17	Scaffold	"Jet Propulsion Laboratory, California Institute of Technology"	SAMN04902346	GCA_001743115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/743/115/GCA_001743115.1_ASM174311v1	-	IF4SW-P1
Staphylococcus aureus	1280	PRJNA319366	319366	Terrabacteria group	Firmicutes	2.86122	32.8	-	MIZJ01	272	2922	2715	9/24/16	3/6/17	Scaffold	"Jet Propulsion Laboratory, California Institute of Technology"	SAMN04902348	GCA_001743185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/743/185/GCA_001743185.1_ASM174318v1	-	IF6SW-P3A
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.73199	52.1	-	FFLE01	45	4896	4554	2/9/16	3/1/17	Scaffold	SC	SAMEA2603159	GCA_900040675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/675/GCA_900040675.1_13566_1_40	-	3135STDY5861320
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0916	39.5	-	FHVG01	34	2291	2055	2/10/16	3/13/17	Scaffold	SC	SAMEA2796718	GCA_900053575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/575/GCA_900053575.1_14673_4_25	-	2245STDY5982744
Escherichia coli	562	PRJNA262859	262859	Proteobacteria	Gammaproteobacteria	4.69306	50.8	-	JWKB01	167	4698	3685	4/25/16	4/25/16	Contig	RIPCM	SAMN03254661	GCA_001630925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/630/925/GCA_001630925.1_ASM163092v1	-	RCE07
Escherichia coli	562	PRJNA262859	262859	Proteobacteria	Gammaproteobacteria	4.90912	50.7	-	LAXB01	76	4952	3994	4/25/16	4/25/16	Contig	RIPCM	SAMN03481183	GCA_001630965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/630/965/GCA_001630965.1_ASM163096v1	-	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.98997	39.8	-	FHIS01	47	2176	1928	2/10/16	3/13/17	Scaffold	SC	SAMEA2204031	GCA_900053755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/755/GCA_900053755.1_11657_4_59	-	2245STDY5609172
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.69743	52.1	-	FFLU01	42	4863	4503	2/9/16	3/1/17	Scaffold	SC	SAMEA2603222	GCA_900040685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/685/GCA_900040685.1_13566_1_69	-	3135STDY5861353
Staphylococcus aureus	1280	PRJNA319366	319366	Terrabacteria group	Firmicutes	2.81638	32.8	-	MIZU01	139	2897	2713	9/24/16	3/6/17	Scaffold	"Jet Propulsion Laboratory, California Institute of Technology"	SAMN04902359	GCA_001743345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/743/345/GCA_001743345.1_ASM174334v1	-	IIF8SW-P2-RA
Staphylococcus aureus	1280	PRJDB1743	327508	Terrabacteria group	Firmicutes	2.81291	32.7	-	BCLL01	60	2913	2781	6/30/16	3/6/17	Scaffold	"society for Innovation and Development, Indian Institute of Science, Bangalore 560012"	SAMD00013708	GCA_001748105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/105/GCA_001748105.1_ASM174810v1	-	M37
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.95655	51.9	-	FFJQ01	47	5168	4774	2/9/16	3/1/17	Scaffold	SC	SAMEA2547724	GCA_900041435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/435/GCA_900041435.1_13097_1_78	-	PO_132
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.9812	39.7	-	FHUR01	19	2200	1960	2/10/16	3/6/17	Scaffold	SC	SAMEA2796604	GCA_900053765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/765/GCA_900053765.1_14673_3_6	-	2245STDY5982627
Escherichia coli	562	PRJNA262859	262859	Proteobacteria	Gammaproteobacteria	5.31545	50.7	-	LAXA01	88	5447	4332	4/25/16	4/25/16	Contig	RIPCM	SAMN03481184	GCA_001630975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/630/975/GCA_001630975.1_ASM163097v1	-	-
Escherichia coli	562	PRJNA262859	262859	Proteobacteria	Gammaproteobacteria	4.93639	50.9	-	LAWZ01	169	5054	3813	4/25/16	4/25/16	Contig	RIPCM	SAMN03481185	GCA_001631005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/631/005/GCA_001631005.1_ASM163100v1	-	-
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.08384	39.7	-	FIVH01	44	2313	2081	2/10/16	3/13/17	Scaffold	SC	SAMEA1033937	GCA_900053815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/815/GCA_900053815.1_7004_3_16	-	B18042
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.9165	51.9	-	FFJR01	52	5131	4753	2/9/16	3/1/17	Scaffold	SC	SAMEA2547726	GCA_900041445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/445/GCA_900041445.1_13097_1_80	-	PO_227
Staphylococcus aureus	1280	PRJDB1744	327509	Terrabacteria group	Firmicutes	2.74704	32.7	-	BCLM01	56	2819	2685	6/30/16	3/6/17	Scaffold	IISc	SAMD00006357	GCA_001748125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/748/125/GCA_001748125.1_ASM174812v1	-	Pune08
Staphylococcus aureus	1280	PRJNA347564	347564	Terrabacteria group	Firmicutes	2.73195	32.7	-	MKYV01	33	2836	2679	10/27/16	3/6/17	Scaffold	ETH Zurich	SAMN05892870	GCA_001855505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/505/GCA_001855505.1_ASM185550v1	-	1608
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91642	51.9	-	FFJU01	50	5129	4752	2/9/16	3/1/17	Scaffold	SC	SAMEA2547731	GCA_900041455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/455/GCA_900041455.1_13097_1_85	-	PO_355
Streptococcus pneumoniae	1313	PRJEB2102	203746	Terrabacteria group	Firmicutes	2.09381	39.7	-	FIVN01	88	2330	2063	2/10/16	3/13/17	Scaffold	SC	SAMEA1012442	GCA_900053825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/825/GCA_900053825.1_4880_1_5	-	D38050
Escherichia coli	562	PRJNA307507	307507	Proteobacteria	Gammaproteobacteria	5.249	50.8209	plasmid pG150_1:CM004293.1	LQHK01	9	5340	4578	5/10/16	5/10/16	Contig	University of Minnesota	SAMN04381847	GCA_001641805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/805/GCA_001641805.1_ASM164180v1	-	G150
Escherichia coli	562	PRJNA309215	309215	Proteobacteria	Gammaproteobacteria	4.75058	50.6	-	LSBR01	1021	4541	1790	5/10/16	5/10/16	Contig	University of the Ryukyus	SAMN04423154	GCA_001641855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/641/855/GCA_001641855.1_ASM164185v1	-	2a06
Streptococcus pneumoniae	1313	PRJEB2098	203734	Terrabacteria group	Firmicutes	2.08367	39.5	-	FIWB01	74	2297	2060	2/10/16	3/13/17	Scaffold	SC	SAMEA807298	GCA_900053835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/835/GCA_900053835.1_4350_6_7	-	78C15284
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91832	51.9	-	FFKB01	44	5156	4757	2/9/16	3/1/17	Scaffold	SC	SAMEA2547750	GCA_900041465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/465/GCA_900041465.1_13103_1_8	-	PO_1060
Staphylococcus aureus	1280	PRJNA355562	355562	Terrabacteria group	Firmicutes	2.8301	32.7	-	MSFD01	53	2966	2836	12/24/16	3/6/17	Scaffold	Universidade Federal da Bahia	SAMN06077114	GCA_001921665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/921/665/GCA_001921665.1_ASM192166v1	-	LC33
Staphylococcus aureus	1280	PRJNA353171	353171	Terrabacteria group	Firmicutes	2.75367	32.8	-	MPPH01	59	2869	2651	1/26/17	3/6/17	Scaffold	Hvidovre Hospital - University of Copenhagen	SAMN06016482	GCA_001971525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/971/525/GCA_001971525.1_ASM197152v1	-	H1670
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.73866	52.1	-	FFKM01	46	4926	4568	2/9/16	3/1/17	Scaffold	SC	SAMEA2547765	GCA_900041475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/475/GCA_900041475.1_13134_1_23	-	PO_1255
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.08815	39.6	-	FIWM01	83	2313	2044	2/10/16	3/13/17	Scaffold	SC	SAMEA867795	GCA_900053845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/845/GCA_900053845.1_3850_8_6	-	B17731X
Escherichia coli	562	PRJNA348517	348517	Proteobacteria	Gammaproteobacteria	5.16483	50.7	-	MLGF01	111	5238	4566	10/26/16	10/26/16	Contig	Ningbo First Hospital	SAMN05908663	GCA_001855185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/185/GCA_001855185.1_ASM185518v1	-	NB08
Escherichia coli	562	PRJNA344752	344752	Proteobacteria	Gammaproteobacteria	6.63216	50.5	-	MKIS01	2263	-	-	12/12/16	12/12/16	Contig	"Zhongshan School of Medicine, Sun Yat-sen University"	SAMN05832830	GCA_001901655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/901/655/GCA_001901655.1_ASM190165v1	-	EC161006
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.1131	39.7	-	FIXC01	32	2347	2114	2/10/16	3/13/17	Scaffold	SC	SAMEA1033835	GCA_900053865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/865/GCA_900053865.1_6972_8_35	-	A31361
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.92109	51.9	-	FFKN01	46	5139	4759	2/9/16	3/1/17	Scaffold	SC	SAMEA2547767	GCA_900041485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/485/GCA_900041485.1_13134_1_25	-	PO_1265
Staphylococcus aureus	1280	PRJNA341407	341407	Terrabacteria group	Firmicutes	2.76554	32.7	-	MTFX01	44	2862	2699	2/13/17	2/22/17	Scaffold	California Department of Public Health	SAMN05721773	GCA_001997145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/997/145/GCA_001997145.1_ASM199714v1	-	ATCC 25923
Staphylococcus aureus	1280	PRJNA379934	379934	Terrabacteria group	Firmicutes	2.88076	32.6701	plasmid pATCC14458-1:NZ_CM007849.1/CM007849.1; plasmid pATCC14458-2:NZ_CM007850.1/CM007850.1; plasmid pATCC14458-3:NZ_CM007851.1/CM007851.1	NARA01	39	3060	2934	4/12/17	4/16/17	Scaffold	Loyola University Chicago	SAMN06624122	GCA_002088085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/085/GCA_002088085.1_ASM208808v1	-	ATCC 14458
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91201	51.9	-	FFKY01	46	5123	4754	2/9/16	3/1/17	Scaffold	SC	SAMEA2603126	GCA_900041495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/495/GCA_900041495.1_13566_1_25	-	3135STDY5861303
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.10079	39.7	-	FIYE01	84	2328	2115	2/10/16	3/13/17	Scaffold	SC	SAMEA867930	GCA_900053875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/875/GCA_900053875.1_5390_8_9	-	D36051
Escherichia coli	562	PRJNA352704	352704	Proteobacteria	Gammaproteobacteria	6.18282	50.7	-	MPGP01	18	6176	5666	12/14/16	12/14/16	Contig	"University of Zurich, Vetsuisse Faculty"	SAMN05954727	GCA_001902665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/902/665/GCA_001902665.1_ASM190266v1	-	113
Escherichia coli	562	PRJNA361484	361484	Proteobacteria	Gammaproteobacteria	4.47886	50.4	-	MTPP01	511	4995	4240	2/1/17	2/1/17	Contig	University of Sao Paulo	SAMN06234269	GCA_001982485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/485/GCA_001982485.1_ASM198248v1	-	ICBEc05
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.17136	39.6	-	FIYR01	63	2413	2169	2/10/16	3/13/17	Scaffold	SC	SAMEA1033548	GCA_900053895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/895/GCA_900053895.1_6972_8_30	-	A31122
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91234	51.9	-	FFLG01	46	5119	4748	2/9/16	3/1/17	Scaffold	SC	SAMEA2603170	GCA_900041505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/505/GCA_900041505.1_13566_1_45	-	3135STDY5861326
Staphylococcus aureus	1280	PRJNA352109	352109	Terrabacteria group	Firmicutes	2.67585	32.7	-	NBZX01	60	2710	2587	4/14/17	4/27/17	Scaffold	ICAR-Veraval Research Centre of CIFT	SAMN05967212	GCA_002092995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/092/995/GCA_002092995.1_ASM209299v1	-	MRSARF-7
Staphylococcus aureus	1280	PRJNA352109	352109	Terrabacteria group	Firmicutes	2.67525	32.7	-	NBZY01	82	2706	2576	4/14/17	9/7/17	Scaffold	ICAR-Veraval Research Centre of CIFT	SAMN05969311	GCA_002093005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/093/005/GCA_002093005.2_ASM209300v2	-	MRSARF-10
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91322	51.9	-	FFLH01	50	5132	4753	2/9/16	3/1/17	Scaffold	SC	SAMEA2603172	GCA_900041515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/515/GCA_900041515.1_13566_1_46	-	3135STDY5861327
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.04804	39.5	-	FIYP01	48	2250	2033	2/10/16	3/13/17	Scaffold	SC	SAMEA867785	GCA_900053905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/905/GCA_900053905.1_5390_6_9	-	A34562
Escherichia coli	562	PRJNA361484	361484	Proteobacteria	Gammaproteobacteria	4.91284	50.6	-	MTPR01	997	5740	5134	2/1/17	2/1/17	Contig	University of Sao Paulo	SAMN06234415	GCA_001982525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/982/525/GCA_001982525.1_ASM198252v1	-	ICBEcBL-II-15(1)
Escherichia coli	562	PRJNA336444	336444	Proteobacteria	Gammaproteobacteria	6.63216	50.5	-	MCNL01	2263	7223	6043	2/5/17	2/5/17	Contig	"Zhongshan School of Medicine, Sun Yat-sen University"	SAMN05510674	GCA_001984885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/984/885/GCA_001984885.1_ASM198488v1	-	EC160090
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06225	39.6	-	FHGD01	34	2279	2016	2/10/16	3/13/17	Scaffold	SC	SAMEA2203913	GCA_900053945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/945/GCA_900053945.1_11679_1_36	-	2245STDY5609053
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.9127	51.9	-	FFLI01	49	5130	4755	2/9/16	3/1/17	Scaffold	SC	SAMEA2603174	GCA_900041525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/525/GCA_900041525.1_13566_1_47	-	3135STDY5861328
Staphylococcus aureus	1280	PRJNA328893	328893	Terrabacteria group	Firmicutes	2.74441	32.8	-	MBTC01	44	2843	2721	4/17/17	4/21/17	Scaffold	zhejiang University 	SAMN05383895	GCA_002094075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/075/GCA_002094075.1_ASM209407v1	28120911	3503VR10
Staphylococcus aureus	1280	PRJNA328893	328893	Terrabacteria group	Firmicutes	2.81413	32.8	-	MBTB01	36	2907	2775	4/17/17	4/21/17	Scaffold	zhejiang University 	SAMN05383889	GCA_002094085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/085/GCA_002094085.1_ASM209408v1	28120911	3503-1
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91165	51.9	-	FFMD01	54	5124	4741	2/9/16	3/1/17	Scaffold	SC	SAMEA2603092	GCA_900041535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/535/GCA_900041535.1_14555_2_8	-	3135STDY5861189
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0781	39.7	-	FHGF01	32	2300	2062	2/10/16	3/13/17	Scaffold	SC	SAMEA2203914	GCA_900053955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/955/GCA_900053955.1_11658_2_74	-	2245STDY5609054
Escherichia coli	562	PRJNA374699	374699	Proteobacteria	Gammaproteobacteria	6.21277	48.8	-	NBCM01	2010	7646	7291	5/12/17	5/12/17	Contig	University of Sao Paulo	SAMN06330320	GCA_002134775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/134/775/GCA_002134775.1_ASM213477v1	-	34VL
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	5.72601	50.3	-	LYDJ01	2457	5768	5050	6/12/17	6/12/17	Contig	Max von Pettenkofer-Institute	SAMN05017800	GCA_002190095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/095/GCA_002190095.1_ASM219009v1	-	ECOR72
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.02941	39.8	-	FHGS01	36	2212	1989	2/10/16	3/13/17	Scaffold	SC	SAMEA2203936	GCA_900053965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/965/GCA_900053965.1_11657_4_40	-	2245STDY5609076
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91022	51.9	-	FFMF01	45	5125	4751	2/9/16	3/1/17	Scaffold	SC	SAMEA2603094	GCA_900041545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/545/GCA_900041545.1_14555_2_9	-	3135STDY5861190
Staphylococcus aureus	1280	PRJNA328893	328893	Terrabacteria group	Firmicutes	2.85885	32.8	-	MBTD01	68	2948	2813	4/17/17	4/21/17	Scaffold	zhejiang University 	SAMN05383987	GCA_002094105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/105/GCA_002094105.1_ASM209410v1	28120911	4126-1
Staphylococcus aureus	1280	PRJNA328893	328893	Terrabacteria group	Firmicutes	2.84131	32.8	-	MBTE01	45	2945	2811	4/17/17	4/21/17	Scaffold	zhejiang University 	SAMN05383989	GCA_002094135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/094/135/GCA_002094135.1_ASM209413v1	28120911	4126-2
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.72047	52	-	FFMK01	42	4876	4523	2/9/16	3/1/17	Scaffold	SC	SAMEA2603110	GCA_900041555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/555/GCA_900041555.1_14555_2_18	-	3135STDY5861199
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08002	39.7	-	FHHC01	220	2274	1996	2/10/16	3/12/17	Scaffold	SC	SAMEA2203942	GCA_900053975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/975/GCA_900053975.1_11657_8_23	-	2245STDY5609082
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	6.99255	47.6	-	LYAA01	2473	6807	6141	6/12/17	6/12/17	Contig	Max von Pettenkofer-Institute	SAMN05004647	GCA_002190835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/190/835/GCA_002190835.1_ASM219083v1	-	ECOR37
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	6.78484	50.2	-	LYCC01	4956	6735	5506	6/12/17	6/12/17	Contig	Max von Pettenkofer-Institute	SAMN05007689	GCA_002191015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/015/GCA_002191015.1_ASM219101v1	-	ECOR46
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.07667	39.5	-	FHIX01	43	2297	2041	2/10/16	3/6/17	Scaffold	SC	SAMEA2335946	GCA_900053985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/985/GCA_900053985.1_12291_4_14	-	2245STDY5699039
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.90204	51.9	-	FFMM01	45	5110	4731	2/9/16	3/1/17	Scaffold	SC	SAMEA2603116	GCA_900041565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/565/GCA_900041565.1_14555_2_21	-	3135STDY5861202
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.70494	32.7	-	NAIX01	153	2763	2608	4/18/17	4/21/17	Scaffold	University of Sydney	SAMN06546675	GCA_002097305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/305/GCA_002097305.1_ASM209730v1	-	V13/2/426
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.7403	32.8	-	NAIY01	267	2922	2737	4/18/17	4/21/17	Scaffold	University of Sydney	SAMN06546674	GCA_002097325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/325/GCA_002097325.1_ASM209732v1	-	V13/2/458
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.72895	52	-	FFMN01	42	4884	4529	2/9/16	3/1/17	Scaffold	SC	SAMEA2603122	GCA_900041575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/575/GCA_900041575.1_14555_2_24	-	3135STDY5861205
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.10135	39.6	-	FHJT01	30	2333	2095	2/10/16	3/6/17	Scaffold	SC	SAMEA2335971	GCA_900053995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/053/995/GCA_900053995.1_12291_4_39	-	2245STDY5699064
Escherichia coli	562	PRJNA321606	321606	Proteobacteria	Gammaproteobacteria	6.52509	49.8	-	LYYB01	3243	6582	5661	6/12/17	6/12/17	Contig	Max von Pettenkofer-Institute	SAMN05010842	GCA_002191135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/191/135/GCA_002191135.1_ASM219113v1	-	ECOR51
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.1493	50.5	-	NLNO01	207	-	-	7/25/17	7/25/17	Contig	FDA/CFSAN	SAMN05452831	GCA_002229495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/495/GCA_002229495.1_ASM222949v1	-	MOD1-EC5502
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08454	39.5	-	FHJU01	32	2246	2031	2/10/16	3/13/17	Scaffold	SC	SAMEA2335972	GCA_900054005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/005/GCA_900054005.1_12291_4_40	-	2245STDY5699065
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.72373	52.1	-	FFMO01	37	4881	4528	2/9/16	3/1/17	Scaffold	SC	SAMEA2603123	GCA_900041585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/585/GCA_900041585.1_14555_2_25	-	3135STDY5861206
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.58986	33	-	NAJD01	366	2707	2478	4/18/17	4/21/17	Scaffold	University of Sydney	SAMN06546669	GCA_002097375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/375/GCA_002097375.1_ASM209737v1	-	N13/1/662
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.65129	32.9	-	NAJF01	309	2777	2557	4/18/17	4/21/17	Scaffold	University of Sydney	SAMN06546667	GCA_002097385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/385/GCA_002097385.1_ASM209738v1	-	Q13/1/141
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91202	51.9	-	FFMS01	46	5134	4743	2/9/16	3/1/17	Scaffold	SC	SAMEA2603132	GCA_900041595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/595/GCA_900041595.1_14555_2_30	-	3135STDY5861211
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0921	39.6	-	FHJV01	56	2305	2053	2/10/16	3/8/17	Scaffold	SC	SAMEA2335973	GCA_900054015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/015/GCA_900054015.1_12291_4_41	-	2245STDY5699066
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.29291	50.3	-	NLNS01	285	-	-	7/25/17	7/25/17	Contig	FDA/CFSAN	SAMN05452832	GCA_002229545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/545/GCA_002229545.1_ASM222954v1	-	MOD1-EC5498
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.83873	50.5	-	NLPN01	208	-	-	7/25/17	7/25/17	Contig	FDA/CFSAN	SAMN05452840	GCA_002229895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/229/895/GCA_002229895.1_ASM222989v1	-	MOD1-EC5439
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.25048	39.5	-	FHNF01	322	2430	2123	2/10/16	3/13/17	Scaffold	SC	SAMEA2467720	GCA_900054025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/025/GCA_900054025.1_13154_3_42	-	2245STDY5804489
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.72288	52.1	-	FFMX01	43	4893	4532	2/9/16	3/1/17	Scaffold	SC	SAMEA2603143	GCA_900041605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/605/GCA_900041605.1_14555_2_36	-	3135STDY5861217
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.61852	32.9	-	NAJC01	495	2812	2564	4/18/17	4/21/17	Scaffold	University of Sydney	SAMN06546670	GCA_002097425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/425/GCA_002097425.1_ASM209742v1	-	N13/1/408
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.65853	32.9	-	NAIU01	360	2794	2623	4/18/17	4/21/17	Scaffold	University of Sydney	SAMN06546679	GCA_002097525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/525/GCA_002097525.1_ASM209752v1	-	N13/4/96
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.72031	52	-	FFMZ01	42	4877	4521	2/9/16	3/1/17	Scaffold	SC	SAMEA2603153	GCA_900041615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/615/GCA_900041615.1_14555_2_41	-	3135STDY5861222
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99397	39.7	-	FHOJ01	50	2196	1973	2/10/16	3/13/17	Scaffold	SC	SAMEA2467761	GCA_900054035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/035/GCA_900054035.1_13154_3_82	-	2245STDY5804530
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.04176	50.5	-	NLOP01	177	-	-	7/25/17	7/25/17	Contig	FDA/CFSAN	SAMN05452833	GCA_002230035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/035/GCA_002230035.1_ASM223003v1	-	MOD1-EC5472
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.90311	50.7	-	NLPP01	255	-	-	7/25/17	7/25/17	Contig	FDA/CFSAN	SAMN05452841	GCA_002230135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/135/GCA_002230135.1_ASM223013v1	-	MOD1-EC5436
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09347	39.5	-	FHQY01	29	2295	2064	2/10/16	3/13/17	Scaffold	SC	SAMEA2521585	GCA_900054045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/045/GCA_900054045.1_13414_2_34	-	2245STDY5819551
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.9118	51.9	-	FFNJ01	48	5108	4744	2/9/16	3/1/17	Scaffold	SC	SAMEA2603177	GCA_900041625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/625/GCA_900041625.1_14555_2_54	-	3135STDY5861235
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.73978	32.7	-	NAIV01	149	2859	2655	4/18/17	4/21/17	Scaffold	University of Sydney	SAMN06546677	GCA_002097615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/615/GCA_002097615.1_ASM209761v1	-	Q13/1/325
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.73575	32.8	-	NAJE01	170	2816	2640	4/18/17	4/21/17	Scaffold	University of Sydney	SAMN06546668	GCA_002097645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/645/GCA_002097645.1_ASM209764v1	-	N13/1/715
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.733	52.1	-	FFNL01	45	4910	4553	2/9/16	3/1/17	Scaffold	SC	SAMEA2603181	GCA_900041635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/635/GCA_900041635.1_14555_2_56	-	3135STDY5861237
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0605	39.7	-	FHTE01	36	2275	2030	2/10/16	3/13/17	Scaffold	SC	SAMEA2521659	GCA_900054055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/055/GCA_900054055.1_13414_3_13	-	2245STDY5819626
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.77033	50.7	-	NLPC01	106	-	-	7/25/17	7/25/17	Contig	FDA/CFSAN	SAMN05452834	GCA_002230435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/435/GCA_002230435.1_ASM223043v1	-	MOD1-EC5454
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.93217	50.4	-	NLPQ01	187	-	-	7/25/17	7/25/17	Contig	FDA/CFSAN	SAMN05452842	GCA_002230475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/475/GCA_002230475.1_ASM223047v1	-	MOD1-EC5435
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.11467	39.5	-	FIWP01	46	2329	2100	2/10/16	3/13/17	Scaffold	SC	SAMEA867926	GCA_900054135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/135/GCA_900054135.1_5390_8_5	-	D30625
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.75715	52	-	FFNM01	113	4897	4533	2/9/16	3/1/17	Scaffold	SC	SAMEA2603184	GCA_900041645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/645/GCA_900041645.1_14555_2_58	-	3135STDY5861239
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.72753	32.8	-	NAJG01	167	2811	2644	4/18/17	4/21/17	Scaffold	University of Sydney	SAMN06546666	GCA_002097655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/655/GCA_002097655.1_ASM209765v1	-	Q13/1/145
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.69184	32.8	-	NAJH01	128	2760	2606	4/18/17	4/21/17	Scaffold	University of Sydney	SAMN06546665	GCA_002097695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/695/GCA_002097695.1_ASM209769v1	-	N13/1/17
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.75171	52.1	-	FFNQ01	43	4929	4578	2/9/16	3/1/17	Scaffold	SC	SAMEA2603193	GCA_900041655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/655/GCA_900041655.1_14555_2_63	-	3135STDY5861244
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.11913	39.6	-	FHRJ01	35	2323	2096	2/10/16	3/13/17	Scaffold	SC	SAMEA2521598	GCA_900054185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/185/GCA_900054185.1_13414_2_47	-	2245STDY5819564
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.62963	50.8	-	NLPR01	97	-	-	7/25/17	7/25/17	Contig	FDA/CFSAN	SAMN05452843	GCA_002230655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/655/GCA_002230655.1_ASM223065v1	-	MOD1-EC5431
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.87806	50.4	-	NLPM01	170	-	-	7/25/17	7/25/17	Contig	FDA/CFSAN	SAMN05452839	GCA_002230675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/675/GCA_002230675.1_ASM223067v1	-	MOD1-EC5440
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.03932	39.7	-	FHRV01	25	2225	2012	2/10/16	3/13/17	Scaffold	SC	SAMEA2521611	GCA_900054195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/195/GCA_900054195.1_13414_2_60	-	2245STDY5819577
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91747	51.9	-	FFJM01	51	5134	4755	2/9/16	3/1/17	Scaffold	SC	SAMEA2547737	GCA_900042405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/405/GCA_900042405.1_13071_1_91	-	PO_575
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.82765	32.6	-	NDKH01	47	2934	2814	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698287	GCA_002120665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/665/GCA_002120665.1_ASM212066v1	28446577	CFSA369
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78515	32.8	-	NDKI01	34	2869	2738	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698286	GCA_002120685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/685/GCA_002120685.1_ASM212068v1	28446577	CFSA368
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.728	52.1	-	FFJN01	41	4888	4531	2/9/16	3/1/17	Scaffold	SC	SAMEA2547739	GCA_900042415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/415/GCA_900042415.1_13071_1_93	-	PO_601
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.11255	39.5	-	FHRZ01	34	2354	2105	2/10/16	3/13/17	Scaffold	SC	SAMEA2521616	GCA_900054205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/205/GCA_900054205.1_13414_2_65	-	2245STDY5819582
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.14092	50.5	-	NLPH01	258	-	-	7/25/17	7/25/17	Contig	FDA/CFSAN	SAMN05452835	GCA_002230715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/715/GCA_002230715.1_ASM223071v1	-	MOD1-EC5446
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	5.01746	50.4	-	NLPI01	114	-	-	7/25/17	7/25/17	Contig	FDA/CFSAN	SAMN05452836	GCA_002230735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/735/GCA_002230735.1_ASM223073v1	-	MOD1-EC5445
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.01724	39.8	-	FHTJ01	24	2259	2015	2/10/16	3/13/17	Scaffold	SC	SAMEA2521669	GCA_900054215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/215/GCA_900054215.1_13414_3_23	-	2245STDY5819636
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91595	51.9	-	FFJV01	53	5123	4755	2/9/16	3/1/17	Scaffold	SC	SAMEA2547725	GCA_900042425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/425/GCA_900042425.1_13097_1_79	-	PO_187
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.83926	32.6	-	NDKJ01	63	2946	2832	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698285	GCA_002120705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/705/GCA_002120705.1_ASM212070v1	28446577	CFSA365
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.88047	32.6	-	NDKK01	62	3009	2889	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698284	GCA_002120715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/715/GCA_002120715.1_ASM212071v1	28446577	CFSA364
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.72405	52	-	FFJT01	48	4887	4523	2/9/16	3/1/17	Scaffold	SC	SAMEA2547727	GCA_900042435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/435/GCA_900042435.1_13097_1_81	-	PO_260
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.12566	39.6	-	FHVF01	41	2362	2110	2/10/16	3/13/17	Scaffold	SC	SAMEA2796715	GCA_900054225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/225/GCA_900054225.1_14673_4_22	-	2245STDY5982741
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.89939	50.7	-	NLPJ01	119	-	-	7/25/17	7/25/17	Contig	FDA/CFSAN	SAMN05452837	GCA_002230785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/785/GCA_002230785.1_ASM223078v1	-	MOD1-EC5443
Escherichia coli	562	PRJNA230969	230969	Proteobacteria	Gammaproteobacteria	4.813	50.6	-	NLPL01	105	-	-	7/25/17	7/25/17	Contig	FDA/CFSAN	SAMN05452838	GCA_002230845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/230/845/GCA_002230845.1_ASM223084v1	-	MOD1-EC5441
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.1206	39.6	-	FHWC01	65	2285	2044	2/10/16	3/6/17	Scaffold	SC	SAMEA2796739	GCA_900054235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/235/GCA_900054235.1_14673_4_46	-	2245STDY5982765
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	5.01168	51.8	-	FFJX01	51	5262	4867	2/9/16	3/1/17	Scaffold	SC	SAMEA2547729	GCA_900042445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/445/GCA_900042445.1_13097_1_83	-	PO_293
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.84302	32.6	-	NDKP01	59	2945	2827	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698279	GCA_002120745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/745/GCA_002120745.1_ASM212074v1	28446577	CFSA359
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.82958	32.6	-	NDKM01	55	2949	2830	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698282	GCA_002120755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/755/GCA_002120755.1_ASM212075v1	28446577	CFSA362
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.90303	51.9	-	FFNC01	51	5103	4731	2/9/16	3/1/17	Scaffold	SC	SAMEA2603160	GCA_900042455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/042/455/GCA_900042455.1_14555_2_45	-	3135STDY5861226
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06694	39.7	-	FHIY01	94	2255	2023	2/10/16	3/5/17	Scaffold	SC	SAMEA2335947	GCA_900054505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/505/GCA_900054505.1_12291_4_15	-	2245STDY5699040
Escherichia coli	562	PRJEB12203	338936	Proteobacteria	Gammaproteobacteria	5.26373	50.4	-	FBVA01	199	-	-	8/15/16	8/15/16	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3715985	GCA_900009835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/009/835/GCA_900009835.1_EF476_contigs	-	EF476
Escherichia coli	562	PRJEB12203	338936	Proteobacteria	Gammaproteobacteria	5.36379	50.3	-	FBVC01	395	-	-	8/15/16	8/15/16	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3715983	GCA_900016105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/105/GCA_900016105.1_EF453_contigs	-	EF453
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.14895	39.4	-	FHPZ01	65	2316	2058	2/10/16	3/5/17	Scaffold	SC	SAMEA2521548	GCA_900054515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/515/GCA_900054515.1_13414_1_92	-	2245STDY5819513
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.71925	52	-	FFNS01	41	4866	4510	2/9/16	3/1/17	Scaffold	SC	SAMEA2603198	GCA_900043515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/515/GCA_900043515.1_14555_2_65	-	3135STDY5861246
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.85721	32.7	-	NDKR01	46	2983	2846	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698277	GCA_002120785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/785/GCA_002120785.1_ASM212078v1	28446577	CFSA357
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.83742	32.6	-	NDKS01	72	2946	2826	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698276	GCA_002120795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/795/GCA_002120795.1_ASM212079v1	28446577	CFSA356
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91095	51.9	-	FFNW01	51	5123	4753	2/9/16	3/1/17	Scaffold	SC	SAMEA2603208	GCA_900043525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/525/GCA_900043525.1_14555_2_71	-	3135STDY5861252
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.08592	39.5	-	FIWR01	90	2300	2061	2/10/16	3/13/17	Scaffold	SC	SAMEA867908	GCA_900054615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/615/GCA_900054615.1_5390_3_5	-	B15249
Escherichia coli	562	PRJEB12203	338936	Proteobacteria	Gammaproteobacteria	5.6608	50.2	-	FBVG01	445	-	-	8/15/16	8/15/16	Contig	ISTITUTO SUPERIORE DI SANITA	SAMEA3715984	GCA_900016125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/125/GCA_900016125.1_EF467_contigs	-	EF467
Escherichia coli	562	PRJEB14379	325749	Proteobacteria	Gammaproteobacteria	4.79089	50	-	FLOF01	6903	-	-	6/15/16	6/15/16	Contig	Centre for Food Safety	SAMEA4031746	GCA_900089785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/089/785/GCA_900089785.1_CQ10	-	-
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.05762	39.7	-	FIYG01	85	2240	1989	2/10/16	3/6/17	Scaffold	SC	SAMEA867916	GCA_900054625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/625/GCA_900054625.1_3850_2_8	-	C15085X
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.94772	51.9	-	FFOI01	44	5158	4784	2/9/16	3/1/17	Scaffold	SC	SAMEA2603245	GCA_900043535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/535/GCA_900043535.1_14555_2_92	-	3135STDY5861273
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.83038	32.6	-	NDKT01	100	2949	2820	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698275	GCA_002120815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/815/GCA_002120815.1_ASM212081v1	28446577	CFSA355
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.82546	32.8	-	NDKW01	86	2932	2802	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698272	GCA_002120835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/835/GCA_002120835.1_ASM212083v1	28446577	CFSA351
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.90978	51.9	-	FFOA01	52	5118	4743	2/9/16	3/1/17	Scaffold	SC	SAMEA2603221	GCA_900044085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/085/GCA_900044085.1_14555_2_78	-	3135STDY5861259
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.11592	39.6	-	FIYL01	75	2334	2112	2/10/16	3/5/17	Scaffold	SC	SAMEA867906	GCA_900054635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/635/GCA_900054635.1_5390_3_7	-	C14215
Escherichia coli TTSH84137	1407067	PRJEB4711	227281	Proteobacteria	Gammaproteobacteria	2.48071	50.4	-	CBVN01	242	-	-	11/11/13	1/30/15	Scaffold	NUS	SAMEA3138823	GCA_000499625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/625/GCA_000499625.1_NDM_ass1	24356827	TTSH84137
Escherichia coli K1	1392869	PRJNA257954	257954	Proteobacteria	Gammaproteobacteria	5.40997	50.7	-	JQFD01	2714	-	-	8/21/14	11/18/15	Scaffold	"Nottingham Trent University, UK"	SAMN02980948	GCA_000742495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/495/GCA_000742495.1_E_coli_k1_913	26497222	913
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04856	39.8	-	FHJO01	38	2250	2027	2/10/16	3/12/17	Scaffold	SC	SAMEA2335965	GCA_900054725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/725/GCA_900054725.1_12291_4_33	-	2245STDY5699058
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.94456	51.9	-	FFNN01	56	5141	4762	2/9/16	3/1/17	Scaffold	SC	SAMEA2603188	GCA_900044305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/305/GCA_900044305.1_14555_2_60	-	3135STDY5861241
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.74252	32.7	-	NDLA01	60	2796	2675	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698268	GCA_002120865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/865/GCA_002120865.1_ASM212086v1	28446577	CFSA346
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78831	32.8	-	NDKY01	38	2865	2733	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698270	GCA_002120875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/875/GCA_002120875.1_ASM212087v1	28446577	CFSA348
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.7982	52.1	-	FFNO01	47	4986	4620	2/9/16	3/1/17	Scaffold	SC	SAMEA2603190	GCA_900044315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/315/GCA_900044315.1_14555_2_61	-	3135STDY5861242
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04868	39.8	-	FHKG01	36	2246	2017	2/10/16	3/13/17	Scaffold	SC	SAMEA2335985	GCA_900054735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/735/GCA_900054735.1_12291_4_53	-	2245STDY5699078
Escherichia coli K1	1392869	PRJNA257951	257951	Proteobacteria	Gammaproteobacteria	4.80225	51.3	-	JQFB01	3336	-	-	8/21/14	11/18/15	Scaffold	"Nottingham Trent University, UK"	SAMN02980946	GCA_000742515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/515/GCA_000742515.1_E.coli_k1_904	26497222	904
Escherichia coli K1	1392869	PRJNA257958	257958	Proteobacteria	Gammaproteobacteria	3.90778	49.2	-	JQFF01	2592	-	-	8/21/14	11/18/15	Scaffold	"Nottingham Trent University, UK"	SAMN02980964	GCA_000742585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/585/GCA_000742585.1_E_coli_k1_934	26497222	934
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.19745	39.7	-	FHNU01	339	2374	2082	2/10/16	3/6/17	Scaffold	SC	SAMEA2467737	GCA_900054745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/745/GCA_900054745.1_13154_3_58	-	2245STDY5804506
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.73068	52.1	-	FFKK01	41	4897	4542	2/9/16	3/1/17	Scaffold	SC	SAMEA2547766	GCA_900044745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/745/GCA_900044745.1_13134_1_24	-	PO_1256
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.86386	32.7	-	NDLB01	94	2981	2854	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698267	GCA_002120885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/885/GCA_002120885.1_ASM212088v1	28446577	CFSA344
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.71758	32.8	-	NDLC01	110	2808	2697	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698266	GCA_002120905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/905/GCA_002120905.1_ASM212090v1	28446577	CFSA343
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91243	51.9	-	FFLF01	52	5118	4749	2/9/16	3/1/17	Scaffold	SC	SAMEA2603163	GCA_900044755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/755/GCA_900044755.1_13566_1_42	-	3135STDY5861322
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06041	39.6	-	FHQK01	19	2275	2037	2/10/16	3/13/17	Scaffold	SC	SAMEA2521565	GCA_900054755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/755/GCA_900054755.1_13414_2_14	-	2245STDY5819531
Escherichia coli K1	1392869	PRJNA257972	257972	Proteobacteria	Gammaproteobacteria	4.99236	50.8	-	JQFG01	2008	-	-	8/21/14	11/18/15	Scaffold	"Nottingham Trent University, UK"	SAMN02981006	GCA_000742595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/595/GCA_000742595.1_E_coli_k1_939	26497222	939
Escherichia coli K1	1392869	PRJNA257974	257974	Proteobacteria	Gammaproteobacteria	4.89656	51.1	-	JQFI01	2651	-	-	8/21/14	11/18/15	Scaffold	"Nottingham Trent University, UK"	SAMN02981032	GCA_000742625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/742/625/GCA_000742625.1_E_coli_k1_947	26497222	947
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.98405	39.7	-	FHTX01	19	2194	1962	2/10/16	3/13/17	Scaffold	SC	SAMEA2796482	GCA_900054765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/765/GCA_900054765.1_14673_1_74	-	2245STDY5982503
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91048	51.9	-	FFOD01	47	5121	4745	2/9/16	3/1/17	Scaffold	SC	SAMEA2603230	GCA_900044765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/765/GCA_900044765.1_14555_2_83	-	3135STDY5861264
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.82843	32.8	-	NDLF01	76	2941	2802	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698263	GCA_002120945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/945/GCA_002120945.1_ASM212094v1	28446577	CFSA339
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.81748	32.8	-	NDLH01	55	2907	2788	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698261	GCA_002120965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/965/GCA_002120965.1_ASM212096v1	28446577	CFSA337
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91129	51.9	-	FFKS01	47	5127	4751	2/9/16	3/1/17	Scaffold	SC	SAMEA2603093	GCA_900045405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/405/GCA_900045405.1_13566_1_10	-	3135STDY5861286
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.11509	39.6	-	FHTZ01	38	2302	2073	2/10/16	3/6/17	Scaffold	SC	SAMEA2796484	GCA_900054775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/775/GCA_900054775.1_14673_1_76	-	2245STDY5982505
Escherichia coli	562	PRJEB6447	260147	Proteobacteria	Gammaproteobacteria	6.04278	50	-	CCPR01	394	-	-	9/6/14	9/6/14	Scaffold	NTNU	SAMEA2593904	GCA_000752855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/752/855/GCA_000752855.1_FHI19	-	E. coli
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	3.8003	49.6	-	JSGD01	2720	-	-	11/13/14	11/13/14	Scaffold	University of Washington	SAMN02802181	GCA_000776495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/495/GCA_000776495.1_ASM77649v1	25373147	upec-86
Streptococcus pneumoniae	1313	PRJEB2098	203734	Terrabacteria group	Firmicutes	2.07959	39.6	-	FIWL01	82	2248	2031	2/10/16	3/13/17	Scaffold	SC	SAMEA807253	GCA_900054895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/895/GCA_900054895.1_4353_1_2	-	59C10281
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.69942	52.1	-	FFKT01	38	4862	4513	2/9/16	3/1/17	Scaffold	SC	SAMEA2603096	GCA_900045415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/415/GCA_900045415.1_13566_1_11	-	3135STDY5861287
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.74388	32.8	-	NDLG01	60	2799	2677	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698262	GCA_002120975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/975/GCA_002120975.1_ASM212097v1	28446577	CFSA338
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.87894	32.6	-	NDLI01	57	3009	2892	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698260	GCA_002120995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/120/995/GCA_002120995.1_ASM212099v1	28446577	CFSA336
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.83668	52.1	-	FFKR01	55	5022	4636	2/9/16	3/1/17	Scaffold	SC	SAMEA2603085	GCA_900045425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/425/GCA_900045425.1_13566_1_6	-	3135STDY5861282
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.02784	39.8	-	FHIB01	39	2219	1996	2/10/16	3/13/17	Scaffold	SC	SAMEA2204007	GCA_900054955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/955/GCA_900054955.1_11679_1_53	-	2245STDY5609148
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	3.41902	49.5	-	JSGX01	2894	-	-	11/13/14	11/13/14	Scaffold	University of Washington	SAMN02802160	GCA_000776525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/776/525/GCA_000776525.1_ASM77652v1	25373147	upec-67
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	3.23827	49.6	-	JSLF01	3217	-	-	11/13/14	11/13/14	Scaffold	University of Washington	SAMN02802027	GCA_000778605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/605/GCA_000778605.1_ASM77860v1	25373147	upec-206
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0459	39.8	-	FHKY01	38	2250	2025	2/10/16	3/5/17	Scaffold	SC	SAMEA2336011	GCA_900054965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/965/GCA_900054965.1_12291_4_79	-	2245STDY5699104
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.71984	52.1	-	FFLJ01	49	4896	4549	2/9/16	3/1/17	Scaffold	SC	SAMEA2603178	GCA_900045435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/435/GCA_900045435.1_13566_1_49	-	3135STDY5861330
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.83017	32.6	-	NDLJ01	60	2931	2820	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698259	GCA_002121025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/025/GCA_002121025.1_ASM212102v1	28446577	CFSA335
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.74241	32.8	-	NDLL01	45	2803	2676	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698257	GCA_002121045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/045/GCA_002121045.1_ASM212104v1	28446577	CFSA332
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.76437	52.1	-	FFLK01	42	4923	4573	2/9/16	3/1/17	Scaffold	SC	SAMEA2603185	GCA_900045445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/445/GCA_900045445.1_13566_1_52	-	3135STDY5861334
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.01547	39.8	-	FHLB01	15	2249	2014	2/10/16	3/13/17	Scaffold	SC	SAMEA2336012	GCA_900054975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/975/GCA_900054975.1_12291_4_80	-	2245STDY5699105
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	3.37752	50.2	-	JSKP01	3156	-	-	11/13/14	11/13/14	Scaffold	University of Washington	SAMN02802047	GCA_000778615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/615/GCA_000778615.1_ASM77861v1	25373147	upec-224
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	1.94873	48.6	-	JSKV01	2438	-	-	11/13/14	11/13/14	Scaffold	University of Washington	SAMN02802040	GCA_000778995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/995/GCA_000778995.1_ASM77899v1	25373147	upec-218
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.05973	39.5	-	FHOV01	39	2276	2029	2/10/16	3/13/17	Scaffold	SC	SAMEA2521499	GCA_900054985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/985/GCA_900054985.1_13414_1_46	-	2245STDY5819467
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.73144	52.1	-	FFOE01	41	4918	4563	2/9/16	3/1/17	Scaffold	SC	SAMEA2603235	GCA_900045455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/455/GCA_900045455.1_14555_2_87	-	3135STDY5861268
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.92863	32.7	-	NDLM01	66	3079	2955	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698256	GCA_002121065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/065/GCA_002121065.1_ASM212106v1	28446577	CFSA329
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.81768	32.7	-	NDLN01	69	2907	2766	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698255	GCA_002121075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/075/GCA_002121075.1_ASM212107v1	28446577	CFSA328
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.71967	52	-	FFOF01	42	4884	4520	2/9/16	3/1/17	Scaffold	SC	SAMEA2603239	GCA_900045465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/465/GCA_900045465.1_14555_2_89	-	3135STDY5861270
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06549	39.5	-	FHPE01	34	2283	2039	2/10/16	3/18/17	Scaffold	SC	SAMEA2521524	GCA_900054995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/054/995/GCA_900054995.1_13414_1_68	-	2245STDY5819489
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	2.89321	49.2	-	JSLS01	3010	-	-	11/13/14	11/13/14	Scaffold	University of Washington	SAMN02802013	GCA_000779535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/535/GCA_000779535.1_ASM77953v1	25373147	upec-194
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	8.07562	45.8	-	JVHV01	636	-	-	7/10/15	7/13/16	Scaffold	University of Washington	SAMN03197611	GCA_001055105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/055/105/GCA_001055105.1_ASM105510v1	26230489	42_ECOL
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.1436	39.6	-	FHRS01	56	2356	2106	2/10/16	3/13/17	Scaffold	SC	SAMEA2521606	GCA_900055005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/005/GCA_900055005.1_13414_2_55	-	2245STDY5819572
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.9175	51.9	-	FFKA01	49	5128	4743	2/9/16	3/1/17	Scaffold	SC	SAMEA2547749	GCA_900046745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/745/GCA_900046745.1_13103_1_7	-	PO_1057
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78219	32.8	-	NDLO01	71	2862	2739	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698254	GCA_002121105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/105/GCA_002121105.1_ASM212110v1	28446577	CFSA327
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.83149	32.6	-	NDLP01	52	2941	2826	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698253	GCA_002121125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/125/GCA_002121125.1_ASM212112v1	28446577	CFSA326
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91655	51.9	-	FFKC01	53	5129	4746	2/9/16	3/1/17	Scaffold	SC	SAMEA2547751	GCA_900046755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/755/GCA_900046755.1_13103_1_9	-	PO_1063
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.9917	39.8	-	FHUS01	51	2191	1936	2/10/16	3/15/17	Scaffold	SC	SAMEA2796607	GCA_900055015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/015/GCA_900055015.1_14673_3_9	-	2245STDY5982630
Escherichia coli	562	PRJNA267549	267549	Proteobacteria	Gammaproteobacteria	10.3391	54	-	JWDZ01	7366	-	-	7/10/15	7/13/16	Scaffold	University of Washington	SAMN03197035	GCA_001076125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/076/125/GCA_001076125.1_ASM107612v1	26230489	1072_ECOL
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	0.709538	51	-	CYEF01	3	668	650	8/22/15	9/30/15	Scaffold	SC	SAMEA1531052	GCA_001283205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/205/GCA_001283205.1_8205_3_37	-	402898
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.01081	39.7	-	FHVD01	32	2188	1974	2/10/16	3/12/17	Scaffold	SC	SAMEA2796716	GCA_900055025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/025/GCA_900055025.1_14673_4_23	-	2245STDY5982742
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91358	51.9	-	FFKO01	47	5120	4746	2/9/16	3/1/17	Scaffold	SC	SAMEA2603078	GCA_900046765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/765/GCA_900046765.1_13566_1_2	-	3135STDY5861278
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.88201	32.6	-	NDLS01	76	3017	2888	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698250	GCA_002121145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/145/GCA_002121145.1_ASM212114v1	28446577	CFSA323
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.82964	32.8	-	NDLR01	64	2923	2801	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698251	GCA_002121155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/155/GCA_002121155.1_ASM212115v1	28446577	CFSA324
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.73843	52.1	-	FFMB01	41	4914	4547	2/9/16	3/1/17	Scaffold	SC	SAMEA2603079	GCA_900046775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/775/GCA_900046775.1_14555_2_2	-	3135STDY5861183
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07584	39.6	-	FIAA01	34	2281	2026	2/10/16	3/12/17	Scaffold	SC	SAMEA2154019	GCA_900055085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/085/GCA_900055085.1_10678_7_39	-	2690STDY5561837
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	3.54804	50.6	-	CYEB01	20	3356	3299	8/22/15	9/30/15	Scaffold	SC	SAMEA1531055	GCA_001283225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/225/GCA_001283225.1_8205_3_36	-	402837
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	1.29961	51.1	-	CYEM01	2	1196	1175	8/22/15	9/30/15	Scaffold	SC	SAMEA1530982	GCA_001283345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/345/GCA_001283345.1_8205_3_55	-	402696
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.17187	39.6	-	FHFX01	166	2353	2101	2/10/16	3/13/17	Scaffold	SC	SAMEA2203899	GCA_900055225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/225/GCA_900055225.1_11657_4_33	-	2245STDY5609039
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91083	51.9	-	FFMC01	46	5125	4759	2/9/16	3/1/17	Scaffold	SC	SAMEA2603082	GCA_900046785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/785/GCA_900046785.1_14555_2_3	-	3135STDY5861184
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.71763	32.7	-	NDLT01	73	2773	2610	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698249	GCA_002121165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/165/GCA_002121165.1_ASM212116v1	28446577	CFSA322
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.8751	32.7	-	NDLX01	68	2984	2859	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698245	GCA_002121205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/205/GCA_002121205.1_ASM212120v1	28446577	CFSA317
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.95235	51.9	-	FFJO01	66	5186	4744	2/9/16	3/1/17	Scaffold	SC	SAMEA2547723	GCA_900047075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/075/GCA_900047075.1_13097_1_77	-	PO_107
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.05973	39.5	-	FHUM01	35	2281	2036	2/10/16	3/8/17	Scaffold	SC	SAMEA2796497	GCA_900055235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/235/GCA_900055235.1_14673_1_89	-	2245STDY5982518
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	2.44203	50.7	-	CYEA01	10	2280	2253	8/22/15	9/30/15	Scaffold	SC	SAMEA1530988	GCA_001283905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/283/905/GCA_001283905.1_8205_3_35	-	402798
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	1.51703	50.4	-	CYEE01	6	1417	1400	8/22/15	9/30/15	Scaffold	SC	SAMEA1531036	GCA_001284145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/284/145/GCA_001284145.1_8205_3_4	-	200696
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.10507	39.6	-	FIYV01	89	2302	2072	2/10/16	3/13/17	Scaffold	SC	SAMEA867799	GCA_900055245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/245/GCA_900055245.1_5362_5_5	-	A30277
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91687	51.9	-	FFJS01	56	5135	4755	2/9/16	3/1/17	Scaffold	SC	SAMEA2547730	GCA_900047085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/085/GCA_900047085.1_13097_1_84	-	PO_351
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.74473	32.8	-	NDMA01	44	2804	2683	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698242	GCA_002121225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/225/GCA_002121225.1_ASM212122v1	28446577	CFSA314
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.8754	32.7	-	NDMB01	85	2995	2860	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698241	GCA_002121235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/235/GCA_002121235.1_ASM212123v1	28446577	CFSA313
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91676	51.9	-	FFJY01	52	5128	4758	2/9/16	3/1/17	Scaffold	SC	SAMEA2547746	GCA_900047095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/095/GCA_900047095.1_13103_1_4	-	PO_812
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.13006	39.6	-	FIYW01	83	2360	2140	2/10/16	3/13/17	Scaffold	SC	SAMEA867771	GCA_900055255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/255/GCA_900055255.1_5390_6_8	-	A34292
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	2.91136	50.6	-	CYDX01	14	2716	2670	8/22/15	9/30/15	Scaffold	SC	SAMEA1531016	GCA_001285585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/285/585/GCA_001285585.1_8205_3_30	-	400896
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	3.48496	50.6	-	CYDU01	16	3242	3181	8/22/15	9/30/15	Scaffold	SC	SAMEA1531000	GCA_001286065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/065/GCA_001286065.1_8205_3_3	-	200232
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.14461	39.6	-	FHGH01	57	2380	2123	2/10/16	3/13/17	Scaffold	SC	SAMEA2203917	GCA_900055315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/315/GCA_900055315.1_11657_4_36	-	2245STDY5609057
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91928	51.9	-	FFKE01	52	5131	4752	2/9/16	3/1/17	Scaffold	SC	SAMEA2547753	GCA_900047105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/105/GCA_900047105.1_13103_1_11	-	PO_1098
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.91372	32.6	-	NDMC01	50	3045	2927	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698240	GCA_002121245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/245/GCA_002121245.1_ASM212124v1	28446577	CFSA312
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.8728	32.6	-	NDMD01	67	2999	2873	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698239	GCA_002121285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/285/GCA_002121285.1_ASM212128v1	28446577	CFSA311
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.72404	52.1	-	FFMJ01	40	4873	4521	2/9/16	3/1/17	Scaffold	SC	SAMEA2603108	GCA_900047115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/115/GCA_900047115.1_14555_2_17	-	3135STDY5861198
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99165	39.8	-	FHLH01	51	2182	1938	2/10/16	3/13/17	Scaffold	SC	SAMEA2336019	GCA_900055325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/325/GCA_900055325.1_12291_4_87	-	2245STDY5699112
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	0.957497	50.2	-	CYEK01	3	939	918	8/22/15	9/30/15	Scaffold	SC	SAMEA1531065	GCA_001286265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/265/GCA_001286265.1_8205_3_47	-	402605
Escherichia coli	562	PRJEB2827	204517	Proteobacteria	Gammaproteobacteria	2.96953	50.7	-	CYDY01	9	2843	2802	8/22/15	9/30/15	Scaffold	SC	SAMEA1530992	GCA_001286345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/286/345/GCA_001286345.1_8205_3_34	-	402403
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99063	39.8	-	FHMG01	50	2202	1942	2/10/16	3/6/17	Scaffold	SC	SAMEA2467541	GCA_900055345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/345/GCA_900055345.1_13091_6_90	-	2245STDY5804441
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.9079	51.9	-	FFNK01	51	5113	4755	2/9/16	3/1/17	Scaffold	SC	SAMEA2603179	GCA_900047125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/125/GCA_900047125.1_14555_2_55	-	3135STDY5861236
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.79922	32.7	-	NDMI01	48	2888	2759	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698234	GCA_002121305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/305/GCA_002121305.1_ASM212130v1	28446577	CFSA305
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.82552	32.8	-	NDMG01	100	2935	2812	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698236	GCA_002121315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/315/GCA_002121315.1_ASM212131v1	28446577	CFSA308
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.83567	52.1	-	FFLP01	51	5011	4630	2/9/16	3/1/17	Scaffold	SC	SAMEA2603194	GCA_900048065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/065/GCA_900048065.1_13566_1_56	-	3135STDY5861338
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.13561	39.6	-	FHMQ01	56	2370	2113	2/10/16	3/5/17	Scaffold	SC	SAMEA2467564	GCA_900055355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/355/GCA_900055355.1_13154_3_22	-	2245STDY5804465
Escherichia coli O119:H6	397448	PRJDB3456	314388	Proteobacteria	Gammaproteobacteria	5.40154	50.4	-	BBUR01	2083	-	-	3/4/16	1/27/17	Scaffold	University of Miyazaki	SAMD00026253	GCA_001592485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/485/GCA_001592485.1_ASM159248v1	27083266	2611-1/85
Escherichia coli O119:H6	397448	PRJDB3456	314388	Proteobacteria	Gammaproteobacteria	5.47518	50.5	-	BBUV01	2782	-	-	3/4/16	1/27/17	Scaffold	University of Miyazaki	SAMD00026257	GCA_001592575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/575/GCA_001592575.1_ASM159257v1	27083266	EC402/03
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04755	39.8	-	FHMT01	40	2247	2018	2/10/16	3/5/17	Scaffold	SC	SAMEA2467570	GCA_900055365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/365/GCA_900055365.1_13154_3_27	-	2245STDY5804471
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJEB6352	257482	Proteobacteria	Gammaproteobacteria	4.91235	51.9	-	FFMV01	47	5120	4745	2/9/16	3/1/17	Scaffold	SC	SAMEA2603141	GCA_900048075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/075/GCA_900048075.1_14555_2_35	-	3135STDY5861216
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.80035	32.8	-	NDMH01	84	2873	2771	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698235	GCA_002121325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/325/GCA_002121325.1_ASM212132v1	28446577	CFSA307
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.82909	32.8	-	NDMJ01	84	2924	2798	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698233	GCA_002121365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/365/GCA_002121365.1_ASM212136v1	28446577	CFSA304
Salmonella enterica subsp. enterica serovar Pullorum	605	PRJEB12734	312330	Proteobacteria	Gammaproteobacteria	4.71325	52.1	-	FJMV01	26	4835	4332	2/25/16	3/1/17	Scaffold	SC	SAMEA3871518	GCA_900067255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/067/255/GCA_900067255.1_NeoSp11	-	449_87
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.25115	39.4	-	FHMY01	265	2459	2159	2/10/16	3/15/17	Scaffold	SC	SAMEA2467572	GCA_900055375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/375/GCA_900055375.1_13154_3_28	-	2245STDY5804473
Escherichia coli O119:H6	397448	PRJDB3456	314388	Proteobacteria	Gammaproteobacteria	5.51014	50.5	-	BBUW01	2257	-	-	3/4/16	1/27/17	Scaffold	University of Miyazaki	SAMD00026258	GCA_001592595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/595/GCA_001592595.1_ASM159259v1	27083266	EC404/03
Escherichia coli	562	PRJNA307142	307142	Proteobacteria	Gammaproteobacteria	2.62287	50.6	-	LVMF01	1590	-	-	4/8/16	4/8/16	Scaffold	Institute Of Microbiology Chinese Academy of Sciences	SAMN04376741	GCA_001614895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/614/895/GCA_001614895.1_ASM161489v1	-	swine3
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04679	39.8	-	FHQL01	40	2258	2026	2/10/16	3/13/17	Scaffold	SC	SAMEA2521566	GCA_900055385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/385/GCA_900055385.1_13414_2_15	-	2245STDY5819532
Candidatus Phytoplasma mali	37692	PRJEA25335	25335	Terrabacteria group	Tenericutes	0.601943	21.4	chromosome:NC_011047.1/CU469464.1	-	1	541	493	7/5/08	4/17/17	Complete Genome	Federal Biological Research Center for Agriculture and Forestry	SAMEA2272373	GCA_000026205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/026/205/GCA_000026205.1_ASM2620v1	18582369	AT
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.93053	32.7	-	NDMK01	78	3071	2951	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698232	GCA_002121385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/385/GCA_002121385.1_ASM212138v1	28446577	CFSA303
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.88338	32.6	-	NDMM01	83	3017	2878	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698230	GCA_002121395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/395/GCA_002121395.1_ASM212139v1	28446577	CFSA301
Candidatus Sulcia muelleri CARI	706194	PRJNA43087	43087	FCB group	Bacteroidetes/Chlorobi group	0.276511	21.1	chromosome:CP002163.1	-	1	288	246	9/9/10	1/31/14	Complete Genome	University of Montana	SAMN02604226	GCA_000147035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/035/GCA_000147035.1_ASM14703v1	-	CARI
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.07839	39.7	-	FHSA01	39	2294	2065	2/10/16	3/5/17	Scaffold	SC	SAMEA2521615	GCA_900055395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/395/GCA_900055395.1_13414_2_64	-	2245STDY5819581
Escherichia coli	562	PRJNA349231	349231	Proteobacteria	Gammaproteobacteria	6.68741	51.9	-	MOKZ01	1557	6588	5975	12/8/16	12/8/16	Scaffold	"College of Veterinary Medicine,China Agricultural University"	SAMN05929010	GCA_001893805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/893/805/GCA_001893805.1_ASM189380v1	-	726
Escherichia coli	562	PRJNA327106	327106	Proteobacteria	Gammaproteobacteria	4.93622	50.5	-	MKXW01	53	-	-	12/22/16	12/22/16	Scaffold	None	SAMN05509319	GCA_001914005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/914/005/GCA_001914005.1_ASM191400v1	-	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.05368	39.5	-	FHTK01	33	2269	2028	2/10/16	3/13/17	Scaffold	SC	SAMEA2521670	GCA_900055405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/405/GCA_900055405.1_13414_3_24	-	2245STDY5819637
bacterium AB1	1898108	PRJNA322176	322176	unclassified Bacteria	unclassified Bacteria (miscellaneous)	0.593366	20.9	chromosome:CP017117.1	-	1	643	610	9/16/16	9/16/16	Complete Genome	University of Wisconsin - Madison	SAMN03766451	GCA_001729625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/625/GCA_001729625.1_ASM172962v1	-	-
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.76341	32.8	-	NDML01	95	2814	2690	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698231	GCA_002121405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/405/GCA_002121405.1_ASM212140v1	28446577	CFSA302
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.87442	32.7	-	NDMO01	54	2995	2850	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698228	GCA_002121445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/445/GCA_002121445.1_ASM212144v1	28446577	CFSA299
Serratia symbiotica	138074	PRJEB10876	320700	Proteobacteria	Gammaproteobacteria	0.650317	20.9	chromosome 1:LN890288.1	-	1	590	492	5/5/16	7/6/16	Complete Genome	Centre de Biologie pour la Gestion des Populations (CBGP - UMR1062)	SAMEA3598224	GCA_900016775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/016/775/GCA_900016775.1_STsPazieg1.0	-	STs
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06266	39.5	-	FHTN01	19	2277	2044	2/10/16	3/5/17	Scaffold	SC	SAMEA2521677	GCA_900055415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/415/GCA_900055415.1_13414_3_31	-	2245STDY5819644
Escherichia coli	562	PRJNA269984	269984	Proteobacteria	Gammaproteobacteria	4.57252	51.2	-	NIEJ01	2126	-	-	6/5/17	6/5/17	Scaffold	Broad Institute	SAMN06856395	GCA_002166365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/166/365/GCA_002166365.1_ASM216636v1	-	31.1a
Escherichia coli	562	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.64332	50.7	-	DCDQ01	38	-	-	9/20/17	9/20/17	Scaffold	University of Queensland	SAMN06450983	GCA_002316485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/316/485/GCA_002316485.1_ASM231648v1	28894102	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09133	39.7	-	FHTO01	22	2337	2114	2/10/16	3/13/17	Scaffold	SC	SAMEA2521681	GCA_900055425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/425/GCA_900055425.1_13414_3_35	-	2245STDY5819648
Candidatus Sulcia muelleri PSPU	1189303	PRJDB96	244455	FCB group	Bacteroidetes/Chlorobi group	0.285352	20.9	chromosome:NZ_AP013293.1/AP013293.1	-	1	296	257	4/15/14	4/3/17	Complete Genome	National Institute of Advanced Industrial Science and Technology	SAMD00061065	GCA_000829155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/829/155/GCA_000829155.1_ASM82915v1	24401857	PSPU
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78698	32.8	-	NDMR01	58	2870	2757	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698225	GCA_002121475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/475/GCA_002121475.1_ASM212147v1	28446577	CFSA296
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.79915	32.7	-	NDMU01	53	2897	2759	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698222	GCA_002121485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/485/GCA_002121485.1_ASM212148v1	28446577	CFSA292
Buchnera aphidicola BCc	372461	PRJNA16372	16372	Proteobacteria	Gammaproteobacteria	0.422434	20.2032	chromosome:NC_008513.1/CP000263.1; plasmid pLeu-BCc:NC_011878.1/AY438025.1	-	2	406	367	10/18/06	3/14/17	Complete Genome	Valencia Univ.	SAMN02604290	GCA_000090965.1	REFR	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/090/965/GCA_000090965.1_ASM9096v1	17038625	BCc
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.98347	39.7	-	FHUX01	34	2182	1976	2/10/16	3/13/17	Scaffold	SC	SAMEA2796708	GCA_900055435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/435/GCA_900055435.1_14673_4_15	-	2245STDY5982734
Escherichia coli	562	PRJNA348753	348753	Proteobacteria	Gammaproteobacteria	4.03891	50.2	-	DCJZ01	323	-	-	9/21/17	9/21/17	Scaffold	University of Queensland	SAMN06452878	GCA_002320195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/195/GCA_002320195.1_ASM232019v1	28894102	-
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.10917	39.6	-	FIYC01	59	2322	2090	2/10/16	3/13/17	Scaffold	SC	SAMEA867924	GCA_900055565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/565/GCA_900055565.1_5390_8_7	-	D33275
Candidatus Carsonella ruddii	114186	PRJNA292590	292590	Proteobacteria	Gammaproteobacteria	0.174018	17.6	chromosome:CP012411.1	-	1	224	168	8/26/15	8/26/15	Complete Genome	USDA-ARS	SAMN03999419	GCA_001274515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/274/515/GCA_001274515.1_ASM127451v1	-	YCCR
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.82062	32.8	-	NDMW01	75	2924	2792	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698220	GCA_002121505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/505/GCA_002121505.1_ASM212150v1	28446577	CFSA290
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.83376	32.6	-	NDMS01	68	2939	2822	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698224	GCA_002121535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/535/GCA_002121535.1_ASM212153v1	28446577	CFSA295
Candidatus Carsonella ruddii DC	667013	PRJNA39871	39871	Proteobacteria	Gammaproteobacteria	0.174014	17.6	chromosome:CP003467.1	-	1	238	207	7/26/13	1/31/14	Complete Genome	RIKEN	SAMN02603759	GCA_000441575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/575/GCA_000441575.1_ASM44157v1	-	DC
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04548	39.8	-	FHGV01	38	2252	2017	2/10/16	3/13/17	Scaffold	SC	SAMEA2203934	GCA_900055655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/655/GCA_900055655.1_11658_2_66	-	2245STDY5609074
Escherichia coli	562	PRJEB14873	355675	Proteobacteria	Gammaproteobacteria	5.51471	50.2	-	FLZK01	1175	-	-	12/2/16	12/2/16	Scaffold	academisch medisch centrum	SAMEA4350771	GCA_900093935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/093/935/GCA_900093935.1_scaffolds_20151018	-	-
Escherichia coli	562	PRJEB14873	355675	Proteobacteria	Gammaproteobacteria	5.50649	50.1	-	FLZI01	1257	-	-	12/2/16	12/2/16	Scaffold	academisch medisch centrum	SAMEA4350770	GCA_900094035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/094/035/GCA_900094035.1_scaffolds_20151013	-	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.10068	39.6	-	FHHR01	30	2325	2079	2/10/16	3/13/17	Scaffold	SC	SAMEA2203996	GCA_900055665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/665/GCA_900055665.1_11657_4_49	-	2245STDY5609137
Candidatus Nasuia deltocephalinicola str. NAS-ALF	1343077	PRJNA206993	206993	Proteobacteria	Betaproteobacteria	0.112091	17.1	chromosome:NC_021919.1/CP006059.1	-	1	165	138	8/1/13	8/21/17	Complete Genome	Yale	SAMN02641653	GCA_000442605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/442/605/GCA_000442605.1_ASM44260v1	23918810	ALF
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.92619	32.7	-	NDMX01	73	3085	2957	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698219	GCA_002121555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/555/GCA_002121555.1_ASM212155v1	28446577	CFSA289
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.80447	32.8	-	NDMY01	42	2906	2767	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698218	GCA_002121565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/565/GCA_002121565.1_ASM212156v1	28446577	CFSA288
Candidatus Nasuia deltocephalinicola	1160784	PRJNA300484	300484	Proteobacteria	Betaproteobacteria	0.112031	16.6	chromosome:NZ_CP013211.1/CP013211.1	-	1	165	138	11/24/15	8/21/17	Complete Genome	University of Hawaii at Manoa	SAMN04223555	GCA_001447885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/447/885/GCA_001447885.1_ASM144788v1	26798106	PUNC
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.02862	39.8	-	FHLJ01	37	2218	1985	2/10/16	3/5/17	Scaffold	SC	SAMEA2336021	GCA_900055675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/675/GCA_900055675.1_12291_4_89	-	2245STDY5699114
Escherichia coli	562	PRJEB18432	356030	Proteobacteria	Gammaproteobacteria	7.60255	46	-	FREP01	2036	-	-	12/8/16	12/8/16	Scaffold	RCPCM	SAMEA18415168	GCA_900143315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/315/GCA_900143315.1_Hp_23-13_05	-	-
Escherichia coli	562	PRJEB18536	356851	Proteobacteria	Gammaproteobacteria	7.60255	46	-	FRYH01	2036	-	-	12/9/16	12/9/16	Scaffold	Moscow	SAMEA23867668	GCA_900148645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/148/645/GCA_900148645.1_Hp_23-13_05	-	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0597	39.5	-	FHRO01	35	2280	2034	2/10/16	3/13/17	Scaffold	SC	SAMEA2521601	GCA_900055685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/685/GCA_900055685.1_13414_2_50	-	2245STDY5819567
Candidatus Carsonella ruddii PV	387662	PRJNA17977	17977	Proteobacteria	Gammaproteobacteria	0.159662	16.6	chromosome:AP009180.1	-	1	213	182	10/17/06	10/7/16	Complete Genome	Kitasato Institute for Life Sciences	SAMD00061085	GCA_000010365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/010/365/GCA_000010365.1_ASM1036v1	-	PV
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.92837	32.7	-	NDNE01	64	3066	2952	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698212	GCA_002121575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/575/GCA_002121575.1_ASM212157v1	28446577	CFSA281
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.87507	32.6	-	NDND01	135	3007	2889	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698213	GCA_002121615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/615/GCA_002121615.1_ASM212161v1	28446577	CFSA283
Salmonella enterica subsp. enterica serovar Bovismorbificans str. 3114	1320309	PRJEB1776	217868	Proteobacteria	Gammaproteobacteria	4.77333	52.2097	chromosome:HF969015.2; plasmid II:HF969016.1	-	2	4813	4733	9/1/13	11/17/15	Chromosome	IGH	SAMEA3138815	GCA_000499465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/499/465/GCA_000499465.2_SB3114	-	3114
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.13785	39.6	-	FHRL01	55	2366	2106	2/10/16	3/5/17	Scaffold	SC	SAMEA2521603	GCA_900055695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/695/GCA_900055695.1_13414_2_52	-	2245STDY5819569
Escherichia coli	562	PRJEB15588	357209	Proteobacteria	Gammaproteobacteria	5.86085	51.7	-	FUVY01	2156	-	-	2/17/17	2/17/17	Scaffold	Kalmar county hospital	SAMEA4483550	GCA_900166725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/725/GCA_900166725.1_Isolate_10	-	-
Escherichia coli	562	PRJEB15588	357209	Proteobacteria	Gammaproteobacteria	5.93931	51.6	-	FUVZ01	2396	-	-	2/17/17	2/17/17	Scaffold	Kalmar county hospital	SAMEA4483549	GCA_900166775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/166/775/GCA_900166775.1_Isolate_9	-	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08134	39.6	-	FHTL01	37	2295	2067	2/10/16	3/12/17	Scaffold	SC	SAMEA2521674	GCA_900055705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/705/GCA_900055705.1_13414_3_28	-	2245STDY5819641
Salmonella enterica subsp. enterica serovar Dublin	98360	PRJEB5985	242819	Proteobacteria	Gammaproteobacteria	4.81404	52.2	chromosome I:LK931502.1	-	1	4505	4301	6/30/14	11/1/14	Chromosome	WTSI	SAMEA724381	GCA_000953175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/953/175/GCA_000953175.1_SC50_scaffold1	-	-
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.8768	32.6	-	NDNF01	53	3003	2882	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698211	GCA_002121625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/625/GCA_002121625.1_ASM212162v1	28446577	CFSA280
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.82107	32.8	-	NDNH01	92	2926	2793	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698209	GCA_002121635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/635/GCA_002121635.1_ASM212163v1	28446577	CFSA277
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.16344	39.6	-	FHTQ01	61	2418	2157	2/10/16	3/8/17	Scaffold	SC	SAMEA2521684	GCA_900055715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/715/GCA_900055715.1_13414_3_38	-	2245STDY5819651
Escherichia coli	562	PRJNA321090	321090	Proteobacteria	Gammaproteobacteria	0.378921	47	-	LZCC01	581	317	265	10/12/16	10/12/16	Scaffold	Christian Medical College	SAMN04965949	GCA_001758055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/055/GCA_001758055.1_ASM175805v1	-	FC673
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	0.545261	46.2	-	JSJD01	791	-	-	11/13/14	11/13/14	Contig	University of Washington	SAMN02802090	GCA_000777775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/775/GCA_000777775.1_ASM77777v1	25373147	upec-263
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.05701	39.5	-	FHVW01	33	2253	2017	2/10/16	3/5/17	Scaffold	SC	SAMEA2796733	GCA_900055725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/725/GCA_900055725.1_14673_4_40	-	2245STDY5982759
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.74053	32.8	-	NDNI01	47	2797	2683	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698208	GCA_002121675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/675/GCA_002121675.1_ASM212167v1	28446577	CFSA276
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJNA306708	306708	Proteobacteria	Gammaproteobacteria	4.77765	52	-	LSAR01	82	4743	3785	3/25/16	3/25/16	Scaffold	Christian Medical College	SAMN04361532	GCA_001597795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/795/GCA_001597795.1_ASM159779v1	-	CMCST_CEPR_1
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA312617	312617	Proteobacteria	Gammaproteobacteria	5.42908	51.8	-	LYRR01	856	5151	4930	9/15/16	9/15/16	Scaffold	U.S. Food and Drug Administration	SAMN05172532	GCA_001729025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/729/025/GCA_001729025.1_ASM172902v1	-	ST397
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.82866	32.8	-	NDNL01	90	2929	2803	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698205	GCA_002121695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/695/GCA_002121695.1_ASM212169v1	28446577	CFSA273
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09329	39.6	-	FHVY01	62	2311	2057	2/10/16	3/13/17	Scaffold	SC	SAMEA2796735	GCA_900055735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/735/GCA_900055735.1_14673_4_42	-	2245STDY5982761
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	1.49709	49.6	-	JSJC01	1952	-	-	11/13/14	11/13/14	Contig	University of Washington	SAMN02802091	GCA_000777875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/875/GCA_000777875.1_ASM77787v1	25373147	upec-264
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	0.533602	48	-	JSJR01	800	-	-	11/13/14	11/13/14	Contig	University of Washington	SAMN02802075	GCA_000778145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/145/GCA_000778145.1_ASM77814v1	25373147	upec-25
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07697	39.6	-	FIDO01	29	2280	2026	2/10/16	3/13/17	Scaffold	SC	SAMEA2147155	GCA_900055835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/835/GCA_900055835.1_10702_5_50	-	2690STDY5561695
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.88605	32.6	-	NDNO01	70	3009	2885	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698202	GCA_002121705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/705/GCA_002121705.1_ASM212170v1	28446577	CFSA270
Salmonella enterica subsp. enterica	59201	PRJNA321088	321088	Proteobacteria	Gammaproteobacteria	1.84839	50.7	-	LZCD01	3197	1220	823	10/12/16	10/12/16	Scaffold	Christian Medical College	SAMN04965947	GCA_001758045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/758/045/GCA_001758045.1_ASM175804v1	-	FC1932
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJNA355344	355344	Proteobacteria	Gammaproteobacteria	4.79551	52	-	MQUM01	70	4991	4378	12/15/16	12/15/16	Scaffold	Christian Medical College	SAMN06074339	GCA_001906765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/765/GCA_001906765.1_ASM190676v1	-	430040
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78943	32.8	-	NDNK01	63	2869	2754	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698206	GCA_002121715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/715/GCA_002121715.1_ASM212171v1	28446577	CFSA274
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.06927	39.7	-	FIUO01	99	2277	2022	2/10/16	3/12/17	Scaffold	SC	SAMEA867917	GCA_900055915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/915/GCA_900055915.1_3850_2_9	-	C13215X
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	0.104143	46.3	-	JSJV01	154	-	-	11/13/14	11/13/14	Contig	University of Washington	SAMN02802071	GCA_000778195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/195/GCA_000778195.1_ASM77819v1	25373147	upec-246
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	0.125843	46.7	-	JSJY01	198	-	-	11/13/14	11/13/14	Contig	University of Washington	SAMN02802066	GCA_000778255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/255/GCA_000778255.1_ASM77825v1	25373147	upec-241
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.11274	39.5	-	FIYM01	57	2345	2102	2/10/16	3/13/17	Scaffold	SC	SAMEA1033740	GCA_900055925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/925/GCA_900055925.1_7004_3_50	-	C12480a
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.80578	32.6	-	NDNP01	58	2909	2789	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698201	GCA_002121755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/755/GCA_002121755.1_ASM212175v1	28446577	CFSA259
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJNA355345	355345	Proteobacteria	Gammaproteobacteria	4.81277	52.1	-	MQUN01	96	4948	4439	12/15/16	12/15/16	Scaffold	Christian Medical College	SAMN06074340	GCA_001906775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/775/GCA_001906775.1_ASM190677v1	-	7830
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJNA355346	355346	Proteobacteria	Gammaproteobacteria	4.79425	52	-	MQUO01	64	4975	4403	12/15/16	12/15/16	Scaffold	Christian Medical College	SAMN06074342	GCA_001906785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/785/GCA_001906785.1_ASM190678v1	-	458426
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.85166	32.6	-	NDNT01	71	2976	2858	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698197	GCA_002121775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/775/GCA_002121775.1_ASM212177v1	28446577	CFSA255
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.05771	39.6	-	FIYO01	80	2269	2062	2/10/16	3/13/17	Scaffold	SC	SAMEA867841	GCA_900055935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/935/GCA_900055935.1_5390_5_1	-	B15901
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	0.624651	50.7	-	JSLH01	921	-	-	11/13/14	11/13/14	Contig	University of Washington	SAMN02802025	GCA_000778625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/625/GCA_000778625.1_ASM77862v1	25373147	upec-204
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	1.64557	48.5	-	JSKY01	2088	-	-	11/13/14	11/13/14	Contig	University of Washington	SAMN02802036	GCA_000778805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/805/GCA_000778805.1_ASM77880v1	25373147	upec-214
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.98199	39.8	-	FHGY01	29	2208	1960	2/10/16	3/13/17	Scaffold	SC	SAMEA2203938	GCA_900055965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/965/GCA_900055965.1_11679_1_39	-	2245STDY5609078
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.74455	32.8	-	NDNQ01	106	2801	2672	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698200	GCA_002121785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/785/GCA_002121785.1_ASM212178v1	28446577	CFSA258
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJNA355343	355343	Proteobacteria	Gammaproteobacteria	4.79908	51.9	-	MQUL01	73	4998	4454	12/15/16	12/15/16	Scaffold	Christian Medical College	SAMN06074336	GCA_001906805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/906/805/GCA_001906805.1_ASM190680v1	-	429038
Salmonella enterica subsp. enterica serovar Typhi str. 404ty	497977	PRJEA28289	28289	Proteobacteria	Gammaproteobacteria	4.64906	52	-	CAAQ01	6441	-	-	5/2/08	5/2/08	Contig	"Pathogen Sequencing Unit, Wellcome Trust Sanger Institute"	SAMEA2272310	GCA_000180195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/180/195/GCA_000180195.1_ASM18019v1	-	404ty
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.91293	32.6	-	NDNR01	77	3045	2927	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698199	GCA_002121795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/795/GCA_002121795.1_ASM212179v1	28446577	CFSA257
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09438	39.5	-	FHIC01	21	2283	2066	2/10/16	3/15/17	Scaffold	SC	SAMEA2204008	GCA_900055975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/975/GCA_900055975.1_11822_8_79	-	2245STDY5609149
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	0.290168	46	-	JSKW01	434	-	-	11/13/14	11/13/14	Contig	University of Washington	SAMN02802039	GCA_000778875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/778/875/GCA_000778875.1_ASM77887v1	25373147	upec-217
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	0.771896	48.9	-	JSKH01	1098	-	-	11/13/14	11/13/14	Contig	University of Washington	SAMN02802055	GCA_000779195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/195/GCA_000779195.1_ASM77919v1	25373147	upec-231
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.05641	39.5	-	FHMS01	27	2272	2040	2/10/16	3/13/17	Scaffold	SC	SAMEA2467569	GCA_900055985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/985/GCA_900055985.1_13154_3_26	-	2245STDY5804470
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.69673	32.8	-	NDNU01	55	2755	2642	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698196	GCA_002121835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/835/GCA_002121835.1_ASM212183v1	28446577	CFSA254
Salmonella enterica subsp. enterica serovar Typhi str. E00-7866	497976	PRJEA28291	28291	Proteobacteria	Gammaproteobacteria	4.76002	52	-	CAAR01	1445	-	-	5/2/08	5/2/08	Contig	"Pathogen Sequencing Unit, Wellcome Trust Sanger Institute"	SAMEA2272040	GCA_000180215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/180/215/GCA_000180215.1_ASM18021v1	-	E00-7866
Salmonella enterica subsp. enterica serovar Typhi str. E01-6750	497975	PRJEA28293	28293	Proteobacteria	Gammaproteobacteria	4.58411	52	-	CAAS01	4564	-	-	5/2/08	5/2/08	Contig	"Pathogen Sequencing Unit, Wellcome Trust Sanger Institute"	SAMEA2272534	GCA_000180235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/180/235/GCA_000180235.1_ASM18023v1	-	E01-6750
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.73816	32.8	-	NDNW01	36	2805	2652	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698194	GCA_002121845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/845/GCA_002121845.1_ASM212184v1	28446577	CFSA252
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08532	39.5	-	FHNS01	38	2267	2052	2/10/16	3/13/17	Scaffold	SC	SAMEA2467736	GCA_900055995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/995/GCA_900055995.1_13154_3_57	-	2245STDY5804505
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	1.69865	47.9	-	JSLM01	2042	-	-	11/13/14	11/13/14	Contig	University of Washington	SAMN02802020	GCA_000779355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/779/355/GCA_000779355.1_ASM77935v1	25373147	upec-20
Escherichia coli DORA_B_14	1403944	PRJNA221489	221489	Proteobacteria	Gammaproteobacteria	0.630582	45	-	AZMA01	412	868	868	12/16/13	12/16/13	Scaffold	"University of California, Berkeley"	SAMN02316559	GCA_000508485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/508/485/GCA_000508485.1_ECB_DORA_B_14_velvet_1.1	-	-
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.1095	39.5	-	FHNV01	61	2281	2029	2/10/16	3/15/17	Scaffold	SC	SAMEA2467740	GCA_900056005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/005/GCA_900056005.1_13154_3_61	-	2245STDY5804509
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78687	32.8	-	NDNX01	50	2882	2742	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698193	GCA_002121875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/875/GCA_002121875.1_ASM212187v1	28446577	CFSA251
Salmonella enterica subsp. enterica serovar Typhi str. E02-1180	497974	PRJEA28295	28295	Proteobacteria	Gammaproteobacteria	4.74062	52	-	CAAT01	422	-	-	5/2/08	5/2/08	Contig	"Pathogen Sequencing Unit, Wellcome Trust Sanger Institute"	SAMEA2271928	GCA_000180255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/180/255/GCA_000180255.1_ASM18025v1	-	E02-1180
Salmonella enterica subsp. enterica serovar Typhi str. E98-0664	497973	PRJEA28299	28299	Proteobacteria	Gammaproteobacteria	4.71672	52	-	CAAU01	3939	-	-	5/2/08	5/2/08	Contig	"Pathogen Sequencing Unit, Wellcome Trust Sanger Institute"	SAMEA2272425	GCA_000180275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/180/275/GCA_000180275.1_ASM18027v1	-	E98-0664
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.89741	32.7	-	NDNZ01	108	3061	2861	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698191	GCA_002121895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/895/GCA_002121895.1_ASM212189v1	28446577	CFSA249
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.03014	39.8	-	FHNW01	42	2224	1997	2/10/16	3/13/17	Scaffold	SC	SAMEA2467741	GCA_900056015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/015/GCA_900056015.1_13154_3_62	-	2245STDY5804510
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	1.64755	48.2	-	JSHN01	2087	-	-	11/13/14	11/13/14	Scaffold	University of Washington	SAMN02802141	GCA_000777015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/015/GCA_000777015.1_ASM77701v1	25373147	upec-5
Escherichia coli	562	PRJNA248737	248737	Proteobacteria	Gammaproteobacteria	0.852988	46.7	-	JSJH01	1158	-	-	11/13/14	11/13/14	Scaffold	University of Washington	SAMN02802086	GCA_000777915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/777/915/GCA_000777915.1_ASM77791v1	25373147	upec-26
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99761	39.7	-	FHTS01	33	2169	1959	2/10/16	3/6/17	Scaffold	SC	SAMEA2521688	GCA_900056025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/025/GCA_900056025.1_13414_3_42	-	2245STDY5819655
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.86364	32.7	-	NDOE01	99	2967	2844	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698186	GCA_002121915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/915/GCA_002121915.1_ASM212191v1	28446577	CFSA244
Salmonella enterica subsp. enterica serovar Typhi str. E98-2068	496068	PRJEA28301	28301	Proteobacteria	Gammaproteobacteria	4.76099	52	-	CAAV01	3682	-	-	5/2/08	5/2/08	Contig	"Pathogen Sequencing Unit, Wellcome Trust Sanger Institute"	SAMEA2272319	GCA_000180295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/180/295/GCA_000180295.1_ASM18029v1	-	E98-2068
Salmonella enterica subsp. enterica serovar Typhi str. J185	496067	PRJEA28303	28303	Proteobacteria	Gammaproteobacteria	4.74391	52.2	-	CAAW01	1065	-	-	5/2/08	5/2/08	Contig	"Pathogen Sequencing Unit, Wellcome Trust Sanger Institute"	SAMEA2271921	GCA_000180315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/180/315/GCA_000180315.1_ASM18031v1	-	J185
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.82258	32.7	-	NDOC01	131	2921	2742	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698188	GCA_002121925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/925/GCA_002121925.1_ASM212192v1	28446577	CFSA246
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.97306	39.8	-	FHWD01	23	2169	1943	2/10/16	3/8/17	Scaffold	SC	SAMEA2796760	GCA_900056035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/035/GCA_900056035.1_14673_4_67	-	2245STDY5982786
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07753	39.6	-	FHZI01	30	2276	2030	2/10/16	3/15/17	Scaffold	SC	SAMEA2143353	GCA_900056045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/045/GCA_900056045.1_10678_7_22	-	2690STDY5561776
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.73278	32.7	-	NDOG01	69	2845	2683	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698184	GCA_002121955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/955/GCA_002121955.1_ASM212195v1	28446577	CFSA242
Salmonella enterica subsp. enterica serovar Typhi str. M223	496066	PRJEA28305	28305	Proteobacteria	Gammaproteobacteria	5.02976	52	-	CAAX01	3024	-	-	5/2/08	5/2/08	Contig	"Pathogen Sequencing Unit, Wellcome Trust Sanger Institute"	SAMEA2272330	GCA_000180335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/180/335/GCA_000180335.1_ASM18033v1	-	M223
Salmonella enterica subsp. enterica serovar Typhi str. AG3	496065	PRJEA28307	28307	Proteobacteria	Gammaproteobacteria	4.75121	52	-	CAAY01	7336	-	-	5/2/08	5/2/08	Contig	"Pathogen Sequencing Unit, Wellcome Trust Sanger Institute"	SAMEA2272037	GCA_000180355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/180/355/GCA_000180355.1_ASM18035v1	-	AG3
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.73612	32.7	-	NDOH01	79	2860	2711	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698183	GCA_002121975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/975/GCA_002121975.1_ASM212197v1	28446577	CFSA241
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99502	39.7	-	FHHS01	28	2203	1970	2/10/16	3/13/17	Scaffold	SC	SAMEA2204000	GCA_900056325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/325/GCA_900056325.1_11679_1_51	-	2245STDY5609141
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09133	39.7	-	FHMA01	67	2297	2062	2/10/16	3/13/17	Scaffold	SC	SAMEA2467533	GCA_900056335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/335/GCA_900056335.1_13091_6_82	-	2245STDY5804433
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78874	32.7	-	NDOJ01	111	2895	2706	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698181	GCA_002121995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/121/995/GCA_002121995.1_ASM212199v1	28446577	CFSA239
Salmonella enterica subsp. enterica serovar Typhi str. E98-3139	496064	PRJEA28309	28309	Proteobacteria	Gammaproteobacteria	4.6005	52.1	-	CAAZ01	415	-	-	5/2/08	5/2/08	Contig	"Pathogen Sequencing Unit, Wellcome Trust Sanger Institute"	SAMEA2272419	GCA_000180375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/180/375/GCA_000180375.1_ASM18037v1	-	E98-3139
Salmonella enterica subsp. enterica serovar Adelaide str. A4-669	913063	PRJNA59695	59695	Proteobacteria	Gammaproteobacteria	4.59586	52.3	-	AFCI01	2076	5312	5196	10/21/11	11/19/13	Contig	Life Technologies	SAMN01112395	GCA_000231465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/465/GCA_000231465.2_ASM23146v2	21859443	A4-669
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.8452	32.8	-	NDOI01	89	2950	2832	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698182	GCA_002122005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/005/GCA_002122005.1_ASM212200v1	28446577	CFSA240
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.11304	39.7	-	FHMR01	31	2329	2098	2/10/16	3/5/17	Scaffold	SC	SAMEA2467568	GCA_900056345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/345/GCA_900056345.1_13154_3_25	-	2245STDY5804469
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08546	39.6	-	FHMU01	37	2317	2061	2/10/16	3/13/17	Scaffold	SC	SAMEA2467573	GCA_900056355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/355/GCA_900056355.1_13154_3_29	-	2245STDY5804474
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.81787	32.7	-	NDOK01	114	2928	2745	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698180	GCA_002122035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/035/GCA_002122035.1_ASM212203v1	28446577	CFSA238
Salmonella enterica subsp. enterica serovar Alachua str. R6-377	913241	PRJNA59697	59697	Proteobacteria	Gammaproteobacteria	4.67126	52.2	-	AFCJ01	2683	5253	5128	10/21/11	11/19/13	Contig	Life Technologies	SAMN01112394	GCA_000231485.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/485/GCA_000231485.2_ASM23148v2	21859443	R6-377
Salmonella enterica subsp. enterica serovar Gaminara str. A4-567	913071	PRJNA59701	59701	Proteobacteria	Gammaproteobacteria	4.60262	52.3	-	AFCL01	2028	5274	5178	10/21/11	11/19/13	Contig	Life Technologies	SAMN01112398	GCA_000231505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/505/GCA_000231505.2_ASM23150v2	21859443	A4-567
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.80104	32.8	-	NDOL01	113	2890	2771	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698179	GCA_002122055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/055/GCA_002122055.1_ASM212205v1	28446577	CFSA237
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09186	39.6	-	FHOL01	42	2301	2073	2/10/16	3/5/17	Scaffold	SC	SAMEA2467765	GCA_900056365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/365/GCA_900056365.1_13154_3_86	-	2245STDY5804534
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.05716	39.6	-	FHRB01	44	2232	2016	2/10/16	3/13/17	Scaffold	SC	SAMEA2521587	GCA_900056375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/375/GCA_900056375.1_13414_2_36	-	2245STDY5819553
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.87597	32.6	-	NDOM01	81	3009	2888	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698178	GCA_002122065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/065/GCA_002122065.1_ASM212206v1	28446577	CFSA236
Salmonella enterica subsp. enterica serovar Give str. S5-487	913072	PRJNA59703	59703	Proteobacteria	Gammaproteobacteria	4.55258	52.3	-	AFCM01	1599	5209	5052	10/21/11	11/19/13	Contig	Life Technologies	SAMN01112397	GCA_000231525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/525/GCA_000231525.2_ASM23152v2	21859443	S5-487
Salmonella enterica subsp. enterica serovar Hvittingfoss str. A4-620	913073	PRJNA59705	59705	Proteobacteria	Gammaproteobacteria	4.6737	52.2	-	AFCN01	1812	5284	5149	10/21/11	11/19/13	Contig	Life Technologies	SAMN01120303	GCA_000231545.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/545/GCA_000231545.2_ASM23154v2	21859443	A4-620
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.85885	32.7	-	NDOP01	94	2962	2830	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698175	GCA_002122075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/075/GCA_002122075.1_ASM212207v1	28446577	CFSA233
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.1042	39.5	-	FHRC01	36	2302	2068	2/10/16	3/13/17	Scaffold	SC	SAMEA2521588	GCA_900056385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/385/GCA_900056385.1_13414_2_37	-	2245STDY5819554
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08533	39.5	-	FHRU01	33	2269	2040	2/10/16	3/12/17	Scaffold	SC	SAMEA2521610	GCA_900056395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/395/GCA_900056395.1_13414_2_59	-	2245STDY5819576
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.74726	32.7	-	NDOQ01	96	2798	2630	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698174	GCA_002122115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/115/GCA_002122115.1_ASM212211v1	28446577	CFSA232
Salmonella enterica subsp. enterica serovar Inverness str. R8-3668	913075	PRJNA59707	59707	Proteobacteria	Gammaproteobacteria	4.94581	52.1	-	AFCO01	2138	5720	5582	10/21/11	11/19/13	Contig	Life Technologies	SAMN01113280	GCA_000231565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/565/GCA_000231565.2_ASM23156v2	21859443	R8-3668
Salmonella enterica subsp. enterica serovar Johannesburg str. S5-703	913077	PRJNA59709	59709	Proteobacteria	Gammaproteobacteria	4.58689	52.3	-	AFCP01	2111	5304	5186	10/21/11	11/19/13	Contig	Life Technologies	SAMN01113281	GCA_000231585.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/585/GCA_000231585.2_ASM23158v2	21859443	S5-703
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78639	32.8	-	NDOT01	63	2874	2748	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698171	GCA_002122135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/135/GCA_002122135.1_ASM212213v1	28446577	CFSA229
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.16182	39.7	-	FHRW01	35	2426	2192	2/10/16	3/13/17	Scaffold	SC	SAMEA2521612	GCA_900056405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/405/GCA_900056405.1_13414_2_61	-	2245STDY5819578
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09105	39.6	-	FHSV01	21	2282	2061	2/10/16	3/15/17	Scaffold	SC	SAMEA2521643	GCA_900056415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/415/GCA_900056415.1_13414_2_92	-	2245STDY5819609
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.73127	32.8	-	NDOS01	74	2805	2666	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698172	GCA_002122145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/145/GCA_002122145.1_ASM212214v1	28446577	CFSA230
Salmonella enterica subsp. enterica serovar Minnesota str. A4-603	913078	PRJNA59711	59711	Proteobacteria	Gammaproteobacteria	4.52727	52.2	-	AFCQ01	2468	5301	5189	10/21/11	11/19/13	Contig	Life Technologies	SAMN01113282	GCA_000231605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/605/GCA_000231605.2_ASM23160v2	21859443	A4-603
Salmonella enterica subsp. enterica serovar Mississippi str. A4-633	913080	PRJNA59713	59713	Proteobacteria	Gammaproteobacteria	4.62641	52.2	-	AFCR01	1730	5220	5080	10/21/11	11/19/13	Contig	Life Technologies	SAMN01113283	GCA_000231625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/625/GCA_000231625.2_ASM23162v2	21859443	A4-633
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.87712	32.6	-	NDKL01	56	3009	2887	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698283	GCA_002122155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/155/GCA_002122155.1_ASM212215v1	28446577	CFSA363
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.13467	39.6	-	FHTC01	58	2369	2103	2/10/16	3/13/17	Scaffold	SC	SAMEA2521663	GCA_900056425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/425/GCA_900056425.1_13414_3_17	-	2245STDY5819630
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09092	39.5	-	FHTB01	42	2285	2051	2/10/16	3/12/17	Scaffold	SC	SAMEA2521660	GCA_900056435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/435/GCA_900056435.1_13414_3_14	-	2245STDY5819627
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.85687	32.7	-	NDKO01	70	2976	2852	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698280	GCA_002122195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/195/GCA_002122195.1_ASM212219v1	28446577	CFSA360
Salmonella enterica subsp. enterica serovar Montevideo str. S5-403	913242	PRJNA59715	59715	Proteobacteria	Gammaproteobacteria	5.02719	52	-	AFCS01	1434	5683	5440	10/21/11	11/19/13	Contig	Life Technologies	SAMN00811624	GCA_000231645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/645/GCA_000231645.2_ASM23164v2	21859443	S5-403
Salmonella enterica subsp. enterica serovar Rubislaw str. A4-653	913081	PRJNA59717	59717	Proteobacteria	Gammaproteobacteria	4.9727	52	-	AFCT01	2416	5800	5682	10/21/11	11/19/13	Contig	Life Technologies	SAMN01120278	GCA_000231665.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/665/GCA_000231665.2_ASM23166v2	21859443	A4-653
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.84281	32.6	-	NDKQ01	77	2951	2836	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698278	GCA_002122205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/205/GCA_002122205.1_ASM212220v1	28446577	CFSA358
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.01978	39.7	-	FIXG01	30	2202	1998	2/10/16	3/13/17	Scaffold	SC	SAMEA1033747	GCA_900056635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/635/GCA_900056635.1_6972_8_27	-	A29265
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.10017	39.6	-	FHHN01	43	2300	2071	2/10/16	3/12/17	Scaffold	SC	SAMEA2203993	GCA_900056695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/695/GCA_900056695.1_11657_8_27	-	2245STDY5609134
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.84269	32.6	-	NDKN01	68	2955	2836	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698281	GCA_002122215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/215/GCA_002122215.1_ASM212221v1	28446577	CFSA361
Salmonella enterica subsp. enterica serovar Senftenberg str. A4-543	913082	PRJNA59719	59719	Proteobacteria	Gammaproteobacteria	4.92235	52	-	AFCU01	2108	5697	5571	10/21/11	11/19/13	Contig	Life Technologies	SAMN01120279	GCA_000231685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/685/GCA_000231685.2_ASM23168v2	21859443	A4-543
Salmonella enterica subsp. enterica serovar Uganda str. R8-3404	913083	PRJNA59721	59721	Proteobacteria	Gammaproteobacteria	4.73527	52.1	-	AFCV01	1543	5412	5251	10/21/11	11/19/13	Contig	Life Technologies	SAMN01120280	GCA_000231705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/705/GCA_000231705.2_ASM23170v2	21859443	R8-3404
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.77721	32.8	-	NDKU01	54	2850	2725	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698274	GCA_002122255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/255/GCA_002122255.1_ASM212225v1	28446577	CFSA353
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06234	39.8	-	FHIR01	61	2269	2029	2/10/16	3/13/17	Scaffold	SC	SAMEA2204026	GCA_900056705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/705/GCA_900056705.1_11511_8_59	-	2245STDY5609167
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06936	39.5	-	FHOU01	36	2292	2045	2/10/16	3/13/17	Scaffold	SC	SAMEA2521498	GCA_900056715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/715/GCA_900056715.1_13414_1_45	-	2245STDY5819466
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78396	32.8	-	NDKV01	62	2879	2751	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698273	GCA_002122275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/275/GCA_002122275.1_ASM212227v1	28446577	CFSA352
Salmonella enterica subsp. enterica serovar Urbana str. R8-2977	913084	PRJNA59723	59723	Proteobacteria	Gammaproteobacteria	4.79321	52.2	-	AFCW01	2504	5671	5535	10/21/11	11/19/13	Contig	Life Technologies	SAMN01120281	GCA_000231725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/725/GCA_000231725.2_ASM23172v2	21859443	R8-2977
Salmonella enterica subsp. enterica serovar Wandsworth str. A4-580	913086	PRJNA59725	59725	Proteobacteria	Gammaproteobacteria	4.77419	52.2	-	AFCX01	2114	5527	5369	10/21/11	11/19/13	Contig	Life Technologies	SAMN01120282	GCA_000231745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/745/GCA_000231745.2_ASM23174v2	21859443	A4-580
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.93765	32.7	-	NDKX01	90	3094	2963	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698271	GCA_002122285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/285/GCA_002122285.1_ASM212228v1	28446577	CFSA349
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06354	39.6	-	FHQM01	43	2241	2023	2/10/16	3/13/17	Scaffold	SC	SAMEA2521567	GCA_900056725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/725/GCA_900056725.1_13414_2_16	-	2245STDY5819533
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99079	39.8	-	FHVJ01	44	2178	1933	2/10/16	3/6/17	Scaffold	SC	SAMEA2796720	GCA_900056735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/735/GCA_900056735.1_14673_4_27	-	2245STDY5982746
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.77616	32.8	-	NDKZ01	45	2852	2725	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698269	GCA_002122295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/295/GCA_002122295.1_ASM212229v1	28446577	CFSA347
Salmonella enterica subsp. enterica serovar Baildon str. R6-199	913069	PRJNA59699	59699	Proteobacteria	Gammaproteobacteria	4.67959	52.2	-	AFCK01	1762	5665	5517	11/22/11	11/19/13	Contig	Life Technologies	SAMN01112399	GCA_000236105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/105/GCA_000236105.2_ASM23610v2	21859443	R6-199
Salmonella enterica subsp. enterica serovar Montevideo str. CT_02035278	984240	PRJNA62845	62845	Proteobacteria	Gammaproteobacteria	4.64295	52.2	-	AHHS01	138	4423	4364	12/30/11	11/19/13	Contig	FDA	SAMN00754302	GCA_000240805.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/240/805/GCA_000240805.2_ASM24080v2	-	CT_02035278
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.92439	32.6	-	NDLD01	89	3078	2959	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698265	GCA_002122335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/335/GCA_002122335.1_ASM212233v1	28446577	CFSA341
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.06263	39.6	-	FIUW01	96	2274	2060	2/10/16	3/13/17	Scaffold	SC	SAMEA867834	GCA_900056895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/895/GCA_900056895.1_5390_5_6	-	B17333
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.12379	39.6	-	FIYX01	88	2335	2093	2/10/16	3/13/17	Scaffold	SC	SAMEA867803	GCA_900056905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/905/GCA_900056905.1_5362_5_3	-	A29167
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.81838	32.7	-	NDLK01	84	2915	2769	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698258	GCA_002122355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/355/GCA_002122355.1_ASM212235v1	28446577	CFSA334
Salmonella enterica subsp. enterica serovar Enteritidis str. 13183-1	925130	PRJNA59995	59995	Proteobacteria	Gammaproteobacteria	4.65061	52.2	-	ALGV01	1172	5234	5174	12/31/12	11/19/13	Contig	FDA	SAMN01041083	GCA_000329865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/329/865/GCA_000329865.1_ASM32986v1	23383127	13183-1
Salmonella enterica subsp. enterica serovar Enteritidis str. 22558	984214	PRJNA62797	62797	Proteobacteria	Gammaproteobacteria	4.62994	52.2	-	ALHD01	297	4572	4511	12/31/12	11/19/13	Contig	FDA	SAMN01041088	GCA_000330025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/025/GCA_000330025.1_ASM33002v1	23383127	22558
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78603	32.8	-	NDLV01	69	2870	2756	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698247	GCA_002122375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/375/GCA_002122375.1_ASM212237v1	28446577	CFSA320
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09863	39.6	-	FHLM01	97	2278	2019	2/10/16	3/13/17	Scaffold	SC	SAMEA2336025	GCA_900056985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/985/GCA_900056985.1_12291_5_3	-	2245STDY5699118
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.1201	39.6	-	FHMX01	272	2294	2036	2/10/16	3/8/17	Scaffold	SC	SAMEA2467574	GCA_900056995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/995/GCA_900056995.1_13154_3_30	-	2245STDY5804475
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.91314	32.6	-	NDLE01	54	3040	2917	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698264	GCA_002122395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/395/GCA_002122395.1_ASM212239v1	28446577	CFSA340
Salmonella enterica subsp. enterica serovar Enteritidis str. 648901 39-2	984224	PRJNA62817	62817	Proteobacteria	Gammaproteobacteria	4.66696	52.1	-	ALHN01	140	4531	4468	12/31/12	11/19/13	Contig	FDA	SAMN01041132	GCA_000330225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/225/GCA_000330225.1_ASM33022v1	23383127	648901 39-2
Salmonella enterica subsp. enterica serovar Enteritidis str. 642044 8-1	984231	PRJNA62831	62831	Proteobacteria	Gammaproteobacteria	4.72449	52	-	ALHS01	176	4633	4564	12/31/12	11/19/13	Contig	FDA	SAMN01041125	GCA_000330325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/325/GCA_000330325.1_ASM33032v1	23383127	642044 8-1
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.77312	32.8	-	NDLQ01	75	2848	2731	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698252	GCA_002122405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/405/GCA_002122405.1_ASM212240v1	28446577	CFSA325
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.14643	39.4	-	FHPY01	75	2303	2057	2/10/16	3/5/17	Scaffold	SC	SAMEA2521546	GCA_900057005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/005/GCA_900057005.1_13414_1_90	-	2245STDY5819511
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.11921	39.6	-	FHUT01	63	2340	2084	2/10/16	3/13/17	Scaffold	SC	SAMEA2796704	GCA_900057015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/015/GCA_900057015.1_14673_4_11	-	2245STDY5982730
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.92482	32.6	-	NDLU01	66	3081	2956	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698248	GCA_002122415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/415/GCA_002122415.1_ASM212241v1	28446577	CFSA321
Salmonella enterica subsp. enterica serovar Enteritidis str. 76-2651	997328	PRJNA63673	63673	Proteobacteria	Gammaproteobacteria	4.67885	52.1	-	ALHW01	609	4853	4789	12/31/12	11/19/13	Contig	FDA	SAMN01041140	GCA_000330405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/405/GCA_000330405.1_ASM33040v1	23383127	76-2651
Salmonella enterica subsp. enterica serovar Enteritidis str. SARB17	1029984	PRJNA66669	66669	Proteobacteria	Gammaproteobacteria	4.67361	52.2	-	ALHY01	243	4597	4535	12/31/12	11/19/13	Contig	FDA	SAMN01041175	GCA_000330445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/445/GCA_000330445.1_ASM33044v1	-	SARB17
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.81779	32.8	-	NDLW01	80	2892	2805	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698246	GCA_002122455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/455/GCA_002122455.1_ASM212245v1	28446577	CFSA319
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.05423	39.6	-	FHWB01	33	2265	2038	2/10/16	3/13/17	Scaffold	SC	SAMEA2796738	GCA_900057025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/025/GCA_900057025.1_14673_4_45	-	2245STDY5982764
Streptococcus pneumoniae	1313	PRJEB2098	203734	Terrabacteria group	Firmicutes	2.09168	39.7	-	FIYF01	72	2318	2102	2/10/16	3/13/17	Scaffold	SC	SAMEA807308	GCA_900057085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/085/GCA_900057085.1_4353_2_2	-	71D36355
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78606	32.8	-	NDLY01	45	2886	2753	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698244	GCA_002122475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/475/GCA_002122475.1_ASM212247v1	28446577	CFSA316
Salmonella enterica subsp. enterica serovar Enteritidis str. 6.0562-1	1029985	PRJNA66681	66681	Proteobacteria	Gammaproteobacteria	4.66482	52.1	-	ALHZ01	1274	5367	5308	12/31/12	11/19/13	Contig	FDA	SAMN01041107	GCA_000330525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/525/GCA_000330525.1_ASM33052v1	23383127	6.0562-1
Salmonella enterica subsp. enterica serovar Enteritidis str. 50-5646	1029986	PRJNA66683	66683	Proteobacteria	Gammaproteobacteria	4.63572	52.2	-	ALIA01	1306	5341	5276	12/31/12	11/19/13	Contig	FDA	SAMN01041095	GCA_000330545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/330/545/GCA_000330545.1_ASM33054v1	23383127	50-5646
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.79015	32.8	-	NDLZ01	41	2879	2751	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698243	GCA_002122485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/485/GCA_002122485.1_ASM212248v1	28446577	CFSA315
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.04593	39.6	-	FIYK01	64	2265	2059	2/10/16	3/13/17	Scaffold	SC	SAMEA867905	GCA_900057095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/095/GCA_900057095.1_5390_3_8	-	D38023
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.048	39.8	-	FHLD01	40	2260	2024	2/10/16	3/13/17	Scaffold	SC	SAMEA2336014	GCA_900057115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/115/GCA_900057115.1_12291_4_82	-	2245STDY5699107
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78697	32.8	-	NDME01	64	2864	2742	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698238	GCA_002122495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/495/GCA_002122495.1_ASM212249v1	28446577	CFSA310
Salmonella enterica subsp. enterica serovar Enteritidis str. 436	696869	PRJNA41921	41921	Proteobacteria	Gammaproteobacteria	4.626	52.1	-	AHUO01	918	5126	5069	2/1/13	11/19/13	Contig	FDA	SAMN01041092	GCA_000336095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/095/GCA_000336095.1_ASM33609v1	23383127	436
Salmonella enterica subsp. enterica serovar Kentucky str. 29439	866919	PRJNA50695	50695	Proteobacteria	Gammaproteobacteria	4.70976	52.1	-	AHUU01	133	4534	4452	2/1/13	12/5/13	Contig	FDA	SAMN00811528	GCA_000336135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/336/135/GCA_000336135.1_ASM33613v1	24158624	29439
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.76255	32.8	-	NDMF01	82	2805	2688	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698237	GCA_002122535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/535/GCA_002122535.1_ASM212253v1	28446577	CFSA309
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.11705	39.6	-	FHLG01	31	2341	2107	2/10/16	3/13/17	Scaffold	SC	SAMEA2336017	GCA_900057125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/125/GCA_900057125.1_12291_4_85	-	2245STDY5699110
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.1213	39.6	-	FHNI01	65	2323	2079	2/10/16	3/13/17	Scaffold	SC	SAMEA2467725	GCA_900057135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/135/GCA_900057135.1_13154_3_46	-	2245STDY5804494
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.91756	32.6	-	NDMN01	66	3049	2928	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698229	GCA_002122545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/545/GCA_002122545.1_ASM212254v1	28446577	CFSA300
Salmonella enterica subsp. enterica serovar Abortusovis str. SS44	1367492	PRJNA212912	212912	Proteobacteria	Gammaproteobacteria	4.50835	52.1	-	AUYQ02	213	-	-	9/5/13	4/9/14	Contig	University of Sassari	SAMN02261484	GCA_000464575.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/575/GCA_000464575.2_SS44_454_2.0	24699959	SS44
Salmonella enterica subsp. enterica serovar Muenchen str. RKS4129	1173882	PRJNA161691	161691	Proteobacteria	Gammaproteobacteria	4.81964	52	-	AUQE01	131	4389	3607	9/6/13	10/24/13	Contig	FDA	SAMN01813944	GCA_000464895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/895/GCA_000464895.1_CFSAN000584_02.0	24092796	RKS4129
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.80117	32.8	-	NDMP01	73	2875	2760	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698227	GCA_002122565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/565/GCA_002122565.1_ASM212256v1	28446577	CFSA298
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.07455	39.6	-	FHOT01	32	2269	2036	2/10/16	3/13/17	Scaffold	SC	SAMEA2521493	GCA_900057145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/145/GCA_900057145.1_13414_1_40	-	2245STDY5819461
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.05888	39.6	-	FHRE01	18	2259	2025	2/10/16	3/12/17	Scaffold	SC	SAMEA2521589	GCA_900057155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/155/GCA_900057155.1_13414_2_38	-	2245STDY5819555
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.86451	32.7	-	NDMQ01	108	2991	2858	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698226	GCA_002122595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/595/GCA_002122595.1_ASM212259v1	28446577	CFSA297
Salmonella enterica subsp. enterica serovar Heidelberg str. SARA33	1137739	PRJNA81823	81823	Proteobacteria	Gammaproteobacteria	4.97534	52.1	-	AUQD01	176	4574	3637	9/6/13	10/24/13	Contig	FDA	SAMN00779315	GCA_000464935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/464/935/GCA_000464935.1_CFSAN001596_01.0	24092796	SARA33
Salmonella enterica subsp. enterica serovar Enteritidis str. 10-34587	1247529	PRJNA178162	178162	Proteobacteria	Gammaproteobacteria	4.72726	52.1	-	AWOI01	124	4561	4321	9/11/13	9/11/14	Contig	Wadsworth Center / NYSDOH	SAMN01779597	GCA_000465535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/465/535/GCA_000465535.1_de_novo_Mira_3.2.1	25062035	10-34587
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.92857	32.7	-	NDMT01	61	3070	2948	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698223	GCA_002122605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/605/GCA_002122605.1_ASM212260v1	28446577	CFSA293
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08968	39.5	-	FHTR01	44	2299	2055	2/10/16	3/13/17	Scaffold	SC	SAMEA2521686	GCA_900057165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/165/GCA_900057165.1_13414_3_40	-	2245STDY5819653
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.98084	39.7	-	FHUU01	18	2200	1961	2/10/16	3/12/17	Scaffold	SC	SAMEA2796705	GCA_900057175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/175/GCA_900057175.1_14673_4_12	-	2245STDY5982731
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.74438	32.8	-	NDMV01	52	2807	2669	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698221	GCA_002122635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/635/GCA_002122635.1_ASM212263v1	28446577	CFSA291
Salmonella enterica subsp. enterica serovar Newport str. WA_14881	997338	PRJNA63693	63693	Proteobacteria	Gammaproteobacteria	4.66307	52.2	-	AYEF01	258	4518	4445	10/25/13	11/20/13	Contig	FDA	SAMN02415194	GCA_000483695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/695/GCA_000483695.1_ASM48369v1	-	WA_14881
Salmonella enterica subsp. enterica serovar Newport str. RI_10P078	997344	PRJNA63705	63705	Proteobacteria	Gammaproteobacteria	4.68206	52.2	-	AYDZ01	71	4448	4375	10/25/13	11/20/13	Contig	FDA	SAMN02415188	GCA_000483735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/735/GCA_000483735.1_ASM48373v1	-	RI_10P078
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.73562	32.8	-	NDMZ01	48	2803	2679	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698217	GCA_002122645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/645/GCA_002122645.1_ASM212264v1	28446577	CFSA287
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.13575	39.4	-	FHID01	42	2318	2083	2/10/16	3/13/17	Scaffold	SC	SAMEA2204009	GCA_900057355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/355/GCA_900057355.1_11657_4_52	-	2245STDY5609150
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09462	39.5	-	FHOX01	37	2307	2037	2/10/16	3/13/17	Scaffold	SC	SAMEA2521513	GCA_900057365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/365/GCA_900057365.1_13414_1_57	-	2245STDY5819478
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.73658	32.7	-	NDNA01	76	2798	2674	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698216	GCA_002122675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/675/GCA_002122675.1_ASM212267v1	28446577	CFSA286
Salmonella enterica subsp. enterica serovar Newport str. WA_14900	997341	PRJNA63699	63699	Proteobacteria	Gammaproteobacteria	4.67662	52.2	-	AYEC01	138	4471	4407	10/25/13	11/20/13	Contig	FDA	SAMN02415191	GCA_000483755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/755/GCA_000483755.1_ASM48375v1	-	WA_14900
Salmonella enterica subsp. enterica serovar Agona str. SA-3	1003187	PRJNA65257	65257	Proteobacteria	Gammaproteobacteria	4.76262	52.1	-	AYDX01	118	4587	4496	10/25/13	11/20/13	Contig	FDA	SAMN02415186	GCA_000483795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/795/GCA_000483795.1_ASM48379v1	-	SA-3
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.87701	32.6	-	NDNB01	65	3010	2883	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698215	GCA_002122685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/685/GCA_002122685.1_ASM212268v1	28446577	CFSA285
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06186	39.6	-	FHSB01	36	2255	2023	2/10/16	3/13/17	Scaffold	SC	SAMEA2521617	GCA_900057375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/375/GCA_900057375.1_13414_2_66	-	2245STDY5819583
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99181	39.8	-	FHUB01	50	2180	1932	2/10/16	3/13/17	Scaffold	SC	SAMEA2796486	GCA_900057385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/385/GCA_900057385.1_14673_1_78	-	2245STDY5982507
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.77313	32.8	-	NDNC01	76	2833	2725	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698214	GCA_002122715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/715/GCA_002122715.1_ASM212271v1	28446577	CFSA284
Salmonella enterica subsp. enterica serovar Newport str. RI_10P079	997345	PRJNA63707	63707	Proteobacteria	Gammaproteobacteria	4.68258	52.2	-	AYDY01	49	4437	4366	10/25/13	11/20/13	Contig	FDA	SAMN02415187	GCA_000483835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/835/GCA_000483835.1_ASM48383v1	-	RI_10P079
Salmonella enterica subsp. enterica serovar Agona str. 266757-1	1124906	PRJNA78411	78411	Proteobacteria	Gammaproteobacteria	4.75286	52.1	-	AYCY01	89	4618	4540	10/25/13	11/20/13	Contig	FDA	SAMN02415161	GCA_000483875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/483/875/GCA_000483875.1_ASM48387v1	-	266757-1
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.89003	32.8	-	NDNM01	86	3016	2881	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698204	GCA_002122735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/735/GCA_002122735.1_ASM212273v1	28446577	CFSA272
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.10608	39.5	-	FHUD01	36	2307	2071	2/10/16	3/13/17	Scaffold	SC	SAMEA2796487	GCA_900057395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/395/GCA_900057395.1_14673_1_79	-	2245STDY5982508
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0268	39.8	-	FHUF01	45	2221	1990	2/10/16	3/13/17	Scaffold	SC	SAMEA2796489	GCA_900057405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/405/GCA_900057405.1_14673_1_81	-	2245STDY5982510
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.86502	32.7	-	NDNN01	158	3001	2866	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698203	GCA_002122745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/745/GCA_002122745.1_ASM212274v1	28446577	CFSA271
Salmonella enterica subsp. enterica serovar Agona str. SA-4	1003188	PRJNA65255	65255	Proteobacteria	Gammaproteobacteria	4.76216	52.1	-	AYDK01	123	4598	4505	10/25/13	11/20/13	Contig	FDA	SAMN02415173	GCA_000484275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/275/GCA_000484275.1_ASM48427v1	-	SA-4
Salmonella enterica subsp. enterica serovar Agona str. SA-1	1003185	PRJNA65261	65261	Proteobacteria	Gammaproteobacteria	4.76508	52.1	-	AYDV01	92	4573	4484	10/25/13	11/20/13	Contig	FDA	SAMN02415184	GCA_000484315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/315/GCA_000484315.1_ASM48431v1	-	SA-1
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.84539	32.7	-	NDNS01	81	2941	2807	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698198	GCA_002122765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/765/GCA_002122765.1_ASM212276v1	28446577	CFSA256
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.15926	39.6	-	FHVM01	30	2391	2139	2/10/16	3/15/17	Scaffold	SC	SAMEA2796722	GCA_900057415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/415/GCA_900057415.1_14673_4_29	-	2245STDY5982748
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04575	39.8	-	FHVN01	34	2259	2024	2/10/16	3/5/17	Scaffold	SC	SAMEA2796723	GCA_900057425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/425/GCA_900057425.1_14673_4_30	-	2245STDY5982749
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.88844	32.8	-	NDNV01	208	3051	2835	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698195	GCA_002122795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/795/GCA_002122795.1_ASM212279v1	28446577	CFSA253
Salmonella enterica subsp. enterica serovar Agona str. 0322	1029990	PRJNA66691	66691	Proteobacteria	Gammaproteobacteria	4.85306	52.1	-	AYDT01	194	4755	4668	10/25/13	11/20/13	Contig	FDA	SAMN02415182	GCA_000484355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/355/GCA_000484355.1_ASM48435v1	-	322
Salmonella enterica subsp. enterica serovar Newport str. VA_R100512570	997336	PRJNA63689	63689	Proteobacteria	Gammaproteobacteria	4.67848	52.2	-	AYEH01	100	4443	4374	10/25/13	11/20/13	Contig	FDA	SAMN02415196	GCA_000484455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/455/GCA_000484455.1_ASM48445v1	-	VA_R100512570
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.92542	32.7	-	NDNY01	79	3072	2948	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698192	GCA_002122805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/805/GCA_002122805.1_ASM212280v1	28446577	CFSA250
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04791	39.7	-	FHRR01	14	2252	2017	2/10/16	3/6/17	Scaffold	SC	SAMEA2521608	GCA_900057655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/655/GCA_900057655.1_13414_2_57	-	2245STDY5819574
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.98448	39.7	-	FHGK01	26	2192	1964	2/10/16	3/13/17	Scaffold	SC	SAMEA2203922	GCA_900057825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/825/GCA_900057825.1_11511_8_47	-	2245STDY5609062
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.77043	32.7	-	NDOA01	47	2842	2719	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698190	GCA_002122825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/825/GCA_002122825.1_ASM212282v1	28446577	CFSA248
Salmonella enterica subsp. enterica serovar Newport str. VA_R100512572	997337	PRJNA63691	63691	Proteobacteria	Gammaproteobacteria	4.71102	52.2	-	AYEG01	116	4581	4508	10/25/13	11/20/13	Contig	FDA	SAMN02415195	GCA_000484475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/484/475/GCA_000484475.1_ASM48447v1	-	VA_R100512572
Salmonella enterica subsp. enterica serovar Typhimurium str. ST4581	702980	PRJNA42909	42909	Proteobacteria	Gammaproteobacteria	4.71988	52.2	-	AOXD01	121	4490	4399	10/28/13	12/5/13	Contig	FDA	SAMN01823742	GCA_000486125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/125/GCA_000486125.1_ASM48612v1	24158624	ST4581
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.75898	32.6	-	NDOF01	84	2824	2657	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698185	GCA_002122855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/855/GCA_002122855.1_ASM212285v1	28446577	CFSA243
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.98933	39.8	-	FHHD01	53	2194	1929	2/10/16	3/6/17	Scaffold	SC	SAMEA2203943	GCA_900057835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/835/GCA_900057835.1_11679_1_40	-	2245STDY5609083
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08985	39.6	-	FHOE01	73	2296	2048	2/10/16	3/13/17	Scaffold	SC	SAMEA2467755	GCA_900057845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/845/GCA_900057845.1_13154_3_76	-	2245STDY5804524
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.81543	32.7	-	NDOD01	132	2920	2743	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698187	GCA_002122875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/875/GCA_002122875.1_ASM212287v1	28446577	CFSA245
Salmonella enterica subsp. enterica serovar Paratyphi B str. SARA56	702983	PRJNA42915	42915	Proteobacteria	Gammaproteobacteria	4.41666	52.3	-	AOXH01	266	4286	4206	10/28/13	12/5/13	Contig	FDA	SAMN01805319	GCA_000486205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/205/GCA_000486205.1_ASM48620v1	24158624	SARA56
Salmonella enterica subsp. enterica serovar Virchow str. ATCC 51955	984254	PRJNA62873	62873	Proteobacteria	Gammaproteobacteria	4.60266	52.2	-	AOXL01	196	4385	4331	10/28/13	12/5/13	Contig	FDA	SAMN01823738	GCA_000486285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/285/GCA_000486285.1_ASM48628v1	24158624	ATCC 51955
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.81742	32.7	-	NDOB01	84	2932	2742	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698189	GCA_002122885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/885/GCA_002122885.1_ASM212288v1	28446577	CFSA247
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04554	39.8	-	FHOG01	41	2258	2030	2/10/16	3/5/17	Scaffold	SC	SAMEA2467757	GCA_900057855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/855/GCA_900057855.1_13154_3_78	-	2245STDY5804526
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06375	39.7	-	FHOM01	38	2269	2032	2/10/16	3/13/17	Scaffold	SC	SAMEA2467766	GCA_900057865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/865/GCA_900057865.1_13154_3_87	-	2245STDY5804535
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.8648	32.7	-	NDON01	95	3002	2816	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698177	GCA_002122915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/915/GCA_002122915.1_ASM212291v1	28446577	CFSA235
Salmonella enterica subsp. enterica serovar Tennessee str. TXSC_TXSC08-21	1003192	PRJNA65247	65247	Proteobacteria	Gammaproteobacteria	4.73802	52.1	-	AOXQ01	420	4754	4689	10/28/13	12/5/13	Contig	FDA	SAMN01813425	GCA_000486385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/385/GCA_000486385.1_ASM48638v1	24158624	TXSC_TXSC08-21
Salmonella enterica subsp. enterica serovar Tallahassee str. 0012	1029982	PRJNA66685	66685	Proteobacteria	Gammaproteobacteria	4.77611	52.1	-	AOXS01	230	4682	4610	10/28/13	12/5/13	Contig	FDA	SAMN01823750	GCA_000486425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/425/GCA_000486425.1_ASM48642v1	24158624	12
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.87716	32.7	-	NDOR01	128	3041	2835	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698173	GCA_002122935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/935/GCA_002122935.1_ASM212293v1	28446577	CFSA231
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.05917	39.5	-	FHQD01	29	2279	2041	2/10/16	3/13/17	Scaffold	SC	SAMEA2521554	GCA_900057875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/875/GCA_900057875.1_13414_2_3	-	2245STDY5819520
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08842	39.6	-	FHQG01	26	2304	2065	2/10/16	3/15/17	Scaffold	SC	SAMEA2521560	GCA_900057885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/885/GCA_900057885.1_13414_2_9	-	2245STDY5819526
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78131	32.8	-	NDOO01	71	2871	2754	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698176	GCA_002122955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/955/GCA_002122955.1_ASM212295v1	28446577	CFSA234
Salmonella enterica subsp. enterica serovar Paratyphi B str. SARA42	1029977	PRJNA66665	66665	Proteobacteria	Gammaproteobacteria	4.51122	52.3	-	AOYB01	135	4289	4200	10/28/13	12/5/13	Contig	FDA	SAMN01805316	GCA_000486605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/605/GCA_000486605.1_ASM48660v1	24158624	SARA42
Salmonella enterica subsp. enterica serovar Oranienburg str. 0250	997333	PRJNA63683	63683	Proteobacteria	Gammaproteobacteria	4.60215	52.1	-	AOYM01	138	4335	4267	10/28/13	12/5/13	Contig	FDA	SAMN01805331	GCA_000486815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/815/GCA_000486815.1_ASM48681v1	24158624	250
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.8742	32.7	-	NDOZ01	62	2998	2860	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698165	GCA_002122975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/975/GCA_002122975.1_ASM212297v1	28446577	CFSA223
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.13166	39.6	-	FHSW01	59	2362	2106	2/10/16	3/13/17	Scaffold	SC	SAMEA2521645	GCA_900057895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/057/895/GCA_900057895.1_13414_2_94	-	2245STDY5819611
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.09218	39.5	-	FIYU01	53	2313	2072	2/10/16	3/13/17	Scaffold	SC	SAMEA1033659	GCA_900058085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/085/GCA_900058085.1_7004_3_54	-	C14257
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.87804	32.6	-	NDPC01	61	3008	2890	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698162	GCA_002122995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/122/995/GCA_002122995.1_ASM212299v1	28446577	CFSA220
Salmonella enterica subsp. enterica serovar Meleagridis str. 0047	997332	PRJNA63681	63681	Proteobacteria	Gammaproteobacteria	4.77475	52.2	-	AOYN01	193	4628	4556	10/28/13	12/5/13	Contig	FDA	SAMN01805330	GCA_000486835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/835/GCA_000486835.1_ASM48683v1	24158624	47
Salmonella enterica subsp. enterica serovar Muenchen str. baa1594	1079477	PRJNA72653	72653	Proteobacteria	Gammaproteobacteria	5.58808	51.7	-	AOYV01	213	5612	5546	10/28/13	12/5/13	Contig	FDA	SAMN01805321	GCA_000486995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/486/995/GCA_000486995.1_ASM48699v1	24158624	baa1594
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.93054	32.7	-	NDPD01	69	3082	2957	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698161	GCA_002123015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/015/GCA_002123015.1_ASM212301v1	28446577	CFSA219
Streptococcus pneumoniae	1313	PRJEB2098	203734	Terrabacteria group	Firmicutes	2.14158	39.7	-	FIYZ01	86	2373	2118	2/10/16	3/12/17	Scaffold	SC	SAMEA807320	GCA_900058095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/095/GCA_900058095.1_4353_1_9	-	62D30974
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06753	39.8	-	FHGZ01	184	2249	1980	2/10/16	3/15/17	Scaffold	SC	SAMEA2203939	GCA_900058125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/125/GCA_900058125.1_11657_4_41	-	2245STDY5609079
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.76787	32.7	-	NDPE01	61	2821	2709	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698160	GCA_002123035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/035/GCA_002123035.1_ASM212303v1	28446577	CFSA218
Salmonella enterica subsp. enterica serovar Kentucky str. ATCC 9263	984236	PRJNA62841	62841	Proteobacteria	Gammaproteobacteria	4.80035	52.1	-	AOYY01	216	4635	4580	10/28/13	12/5/13	Contig	FDA	SAMN01823719	GCA_000487055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/055/GCA_000487055.1_ASM48705v1	24158624	ATCC 9263
Salmonella enterica subsp. enterica serovar Gaminara str. ATCC BAA-711	984235	PRJNA62839	62839	Proteobacteria	Gammaproteobacteria	5.07277	52.1	-	AOZF01	334	5113	5057	10/28/13	12/5/13	Contig	FDA	SAMN01813418	GCA_000487195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/195/GCA_000487195.1_ASM48719v1	24158624	ATCC BAA-711
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.7423	32.7	-	NDPG01	57	2794	2682	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698158	GCA_002123055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/055/GCA_002123055.1_ASM212305v1	28446577	CFSA216
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08141	39.7	-	FHIF01	35	2301	2060	2/10/16	3/13/17	Scaffold	SC	SAMEA2204013	GCA_900058135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/135/GCA_900058135.1_11657_4_55	-	2245STDY5609154
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.03723	39.8	-	FHIL01	47	2234	1999	2/10/16	3/13/17	Scaffold	SC	SAMEA2204020	GCA_900058145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/145/GCA_900058145.1_11511_8_57	-	2245STDY5609161
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78764	32.8	-	NDPI01	59	2866	2739	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698156	GCA_002123075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/075/GCA_002123075.1_ASM212307v1	28446577	CFSA214
Salmonella enterica subsp. enterica serovar Choleraesuis str. 0006	997330	PRJNA63677	63677	Proteobacteria	Gammaproteobacteria	4.65507	52.2	-	AOZL01	158	4191	4105	10/28/13	12/5/13	Contig	FDA	SAMN01823749	GCA_000487315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/315/GCA_000487315.1_ASM48731v1	24158624	6
Salmonella enterica subsp. enterica serovar Bareilly str. 2780	1163747	PRJNA97503	97503	Proteobacteria	Gammaproteobacteria	4.75019	52	-	AOZP01	318	4743	4676	10/28/13	12/5/13	Contig	US Food and Drug Administration	SAMN01813426	GCA_000487395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/395/GCA_000487395.1_ASM48739v1	24158624	2780
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.83262	32.6	-	NDNJ01	64	2950	2827	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698207	GCA_002123095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/095/GCA_002123095.1_ASM212309v1	28446577	CFSA275
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.15313	39.6	-	FHIP01	44	2365	2150	2/10/16	3/5/17	Scaffold	SC	SAMEA2204024	GCA_900058155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/155/GCA_900058155.1_11657_8_33	-	2245STDY5609165
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.10983	39.6	-	FHOF01	63	2325	2065	2/10/16	3/13/17	Scaffold	SC	SAMEA2467756	GCA_900058165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/165/GCA_900058165.1_13154_3_77	-	2245STDY5804525
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.88184	32.6	-	NDPJ01	63	3010	2890	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698155	GCA_002123105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/105/GCA_002123105.1_ASM212310v1	28446577	CFSA213
Salmonella enterica subsp. enterica serovar London str. CFSAN001081	1194155	PRJNA167392	167392	Proteobacteria	Gammaproteobacteria	4.24042	53.2	-	APAI01	1963	5071	4999	10/28/13	12/5/13	Contig	FDA	SAMN01816346	GCA_000487755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/487/755/GCA_000487755.1_ASM48775v1	24158624	CFSAN001081
Salmonella enterica subsp. enterica serovar Agona str. 400095 18	1072595	PRJNA71299	71299	Proteobacteria	Gammaproteobacteria	4.76386	52.1	-	AYDB01	79	4579	4491	10/31/13	11/20/13	Contig	FDA	SAMN02415164	GCA_000494345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/345/GCA_000494345.1_CFSAN000456_01.0	-	400095 18
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.80198	32.8	-	NDPK01	44	2889	2766	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698154	GCA_002123135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/135/GCA_002123135.1_ASM212313v1	28446577	CFSA212
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09812	39.5	-	FHOY01	46	2318	2078	2/10/16	3/13/17	Scaffold	SC	SAMEA2521514	GCA_900058175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/175/GCA_900058175.1_13414_1_58	-	2245STDY5819479
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04967	39.6	-	FHQE01	21	2256	2030	2/10/16	3/13/17	Scaffold	SC	SAMEA2521555	GCA_900058185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/185/GCA_900058185.1_13414_2_4	-	2245STDY5819521
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78845	32.8	-	NDPL01	57	2865	2752	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698153	GCA_002123145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/145/GCA_002123145.1_ASM212314v1	28446577	CFSA211
Salmonella enterica subsp. enterica serovar Newport str. VA_R100506907	997335	PRJNA63687	63687	Proteobacteria	Gammaproteobacteria	4.67794	52.2	-	AYEI01	163	4516	4444	10/31/13	11/20/13	Contig	FDA	SAMN02415197	GCA_000494485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/494/485/GCA_000494485.1_CFSAN000866_01.0	-	VA_R100506907
Salmonella enterica subsp. enterica serovar Typhimurium str. L945	1310128	PRJNA193466	193466	Proteobacteria	Gammaproteobacteria	4.7692	51.9	-	AROB01	5845	-	-	11/1/13	11/20/13	Contig	Nankai University	SAMN02415306	GCA_000495135.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/135/GCA_000495135.2_V1	24138507	L945
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.7041	32.7	-	NDPM01	72	2752	2637	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698152	GCA_002123175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/175/GCA_002123175.1_ASM212317v1	28446577	CFSA210
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.07131	39.5	-	FHQH01	37	2275	2040	2/10/16	3/13/17	Scaffold	SC	SAMEA2521558	GCA_900058195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/195/GCA_900058195.1_13414_2_7	-	2245STDY5819524
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.15141	39.5	-	FHFZ01	207	2384	2102	2/10/16	3/18/17	Scaffold	SC	SAMEA2203901	GCA_900058395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/395/GCA_900058395.1_11658_2_80	-	2245STDY5609041
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.82401	32.8	-	NDPO01	93	2932	2800	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698150	GCA_002123195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/195/GCA_002123195.1_ASM212319v1	28446577	CFSA208
Salmonella enterica subsp. enterica serovar Typhimurium str. L904	1310131	PRJNA193464	193464	Proteobacteria	Gammaproteobacteria	3.61433	52.2	-	AROE01	6945	-	-	11/1/13	11/20/13	Contig	Nankai University	SAMN02415309	GCA_000495155.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/155/GCA_000495155.2_V1	24138507	L904
Salmonella enterica subsp. enterica serovar Typhimurium str. L796	1310132	PRJNA193455	193455	Proteobacteria	Gammaproteobacteria	4.55994	52	-	AROF01	4554	-	-	11/1/13	11/20/13	Contig	Nankai University	SAMN02415310	GCA_000495175.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/175/GCA_000495175.2_V1	24138507	L796
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.77655	32.8	-	NDPP01	66	2851	2726	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698149	GCA_002123215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/215/GCA_002123215.1_ASM212321v1	28446577	CFSA207
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04812	39.8	-	FHJS01	35	2253	2028	2/10/16	3/13/17	Scaffold	SC	SAMEA2335970	GCA_900058405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/405/GCA_900058405.1_12291_4_38	-	2245STDY5699063
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.16829	39.6	-	FHLA01	61	2429	2164	2/10/16	3/13/17	Scaffold	SC	SAMEA2336010	GCA_900058415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/415/GCA_900058415.1_12291_4_78	-	2245STDY5699103
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.74233	32.7	-	NDPQ01	45	2818	2681	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698148	GCA_002123235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/235/GCA_002123235.1_ASM212323v1	28446577	CFSA206
Salmonella enterica subsp. enterica serovar Typhimurium str. L852	1310129	PRJNA193463	193463	Proteobacteria	Gammaproteobacteria	3.68834	52.2	-	AROC01	6781	-	-	11/1/13	11/20/13	Contig	Nankai University	SAMN02415307	GCA_000495195.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/195/GCA_000495195.2_V1	24138507	L852
Salmonella enterica subsp. enterica serovar Typhimurium str. L927	1310130	PRJNA193465	193465	Proteobacteria	Gammaproteobacteria	4.24146	51.9	-	AROD01	5757	-	-	11/1/13	11/20/13	Contig	Nankai University	SAMN02415308	GCA_000495215.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/215/GCA_000495215.2_V1	24138507	L927
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.76823	32.6	-	NDPU01	49	2890	2760	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698144	GCA_002123255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/255/GCA_002123255.1_ASM212325v1	28446577	CFSA202
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.23718	39.5	-	FHOB01	185	2434	2150	2/10/16	3/5/17	Scaffold	SC	SAMEA2467748	GCA_900058425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/425/GCA_900058425.1_13154_3_69	-	2245STDY5804517
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09738	39.6	-	FHVQ01	40	2281	2060	2/10/16	3/13/17	Scaffold	SC	SAMEA2796726	GCA_900058435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/435/GCA_900058435.1_14673_4_33	-	2245STDY5982752
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.81075	32.6	-	NDPW01	79	2939	2783	5/10/17	5/25/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698142	GCA_002123275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/275/GCA_002123275.1_ASM212327v1	28446577	CFSA200
Salmonella enterica subsp. enterica serovar Typhimurium str. L847	1310133	PRJNA193456	193456	Proteobacteria	Gammaproteobacteria	4.61951	52.3	-	AROG01	3227	-	-	11/1/13	11/20/13	Contig	Nankai University	SAMN02415311	GCA_000495235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/235/GCA_000495235.1_V1	24138507	L847
Salmonella enterica subsp. enterica serovar Saintpaul str. S-70	1321366	PRJNA196925	196925	Proteobacteria	Gammaproteobacteria	4.62438	52.1	-	AQQN01	84	4478	4389	11/4/13	12/27/13	Contig	"Centro de Investigacion en Alimentacion y Desarrollo, A. C., Coordinacion Culiacan"	SAMN02415313	GCA_000495295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/295/GCA_000495295.1_S-70	24336367	S-70
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.76236	32.7	-	NDOV01	55	2839	2702	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698169	GCA_002123295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/295/GCA_002123295.1_ASM212329v1	28446577	CFSA227
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07586	39.6	-	FICS01	30	2279	2030	2/10/16	3/8/17	Scaffold	SC	SAMEA2162314	GCA_900058465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/465/GCA_900058465.1_10702_5_30	-	2690STDY5561727
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.07847	39.6	-	FIYY01	66	2267	2028	2/10/16	3/8/17	Scaffold	SC	SAMEA867882	GCA_900058545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/545/GCA_900058545.1_5390_6_2	-	A33813
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.81044	33	-	NDOY01	278	2907	2702	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698166	GCA_002123305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/305/GCA_002123305.1_ASM212330v1	28446577	CFSA224
Salmonella enterica subsp. enterica serovar Oranienburg str. S-76	1323580	PRJNA197302	197302	Proteobacteria	Gammaproteobacteria	4.62617	52.1	-	AROZ01	182	4524	4444	11/4/13	12/27/13	Contig	Centro de Investigacion en Alimentacion y Desarrollo A.C. Coordinacion Culiacan	SAMN02415312	GCA_000495315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/495/315/GCA_000495315.1_S-76	24336368	S-76
Salmonella enterica subsp. enterica serovar Cerro str. 5569	1173805	PRJNA161337	161337	Proteobacteria	Gammaproteobacteria	4.62812	52.1	-	AYVH01	996	5041	4933	12/10/13	12/10/13	Contig	FDA	SAMN01813920	GCA_000505125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/505/125/GCA_000505125.1_CFSAN001338_01.0	-	5569
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.74962	32.8	-	NDPX01	56	2836	2661	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698141	GCA_002123315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/315/GCA_002123315.1_ASM212331v1	28446577	CFSA199
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.18976	39.6	-	FHHA01	218	2396	2088	2/10/16	3/13/17	Scaffold	SC	SAMEA2203940	GCA_900058645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/645/GCA_900058645.1_11511_8_49	-	2245STDY5609080
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.02806	39.8	-	FHOD01	31	2209	1981	2/10/16	3/13/17	Scaffold	SC	SAMEA2467754	GCA_900058655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/655/GCA_900058655.1_13154_3_75	-	2245STDY5804523
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.79661	32.7	-	NDQA01	69	2919	2801	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698138	GCA_002123355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/355/GCA_002123355.1_ASM212335v1	28446577	CFSA196
Salmonella enterica subsp. enterica serovar Heidelberg str. N1514	1054958	PRJNA69871	69871	Proteobacteria	Gammaproteobacteria	4.7347	52.1	-	AKYM01	271	4698	4627	3/26/14	8/1/14	Contig	FDA	SAMN01041040	GCA_000601375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/601/375/GCA_000601375.1_SEEH1514_1.0	24732280	N1514
Salmonella enterica subsp. enterica serovar Heidelberg str. SARA 39	1054950	PRJNA69887	69887	Proteobacteria	Gammaproteobacteria	5.05621	51.9	-	AMMJ01	177	4976	4906	3/27/14	6/13/14	Contig	FDA	SAMN01087987	GCA_000603385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/385/GCA_000603385.1_ASM60338v1	24732280	SARA 39
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.92632	32.7	-	NDQD01	75	3080	2954	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698135	GCA_002123375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/375/GCA_002123375.1_ASM212337v1	28446577	CFSA193
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99074	39.8	-	FHOQ01	51	2194	1938	2/10/16	3/13/17	Scaffold	SC	SAMEA2467769	GCA_900058665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/665/GCA_900058665.1_13154_3_90	-	2245STDY5804538
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.11969	39.7	-	FIXK01	81	2388	2128	2/10/16	3/13/17	Scaffold	SC	SAMEA867762	GCA_900058795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/795/GCA_900058795.1_3850_1_9	-	D38094X
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.92666	32.7	-	NDQE01	78	3084	2957	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698134	GCA_002123385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/385/GCA_002123385.1_ASM212338v1	28446577	CFSA192
Salmonella enterica subsp. enterica serovar Heidelberg str. N189	1054957	PRJNA69873	69873	Proteobacteria	Gammaproteobacteria	4.79342	52	-	AMMP01	634	5045	4976	3/27/14	6/13/14	Contig	FDA	SAMN01087994	GCA_000603405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/405/GCA_000603405.1_ASM60340v1	24732280	N189
Salmonella enterica subsp. enterica serovar Heidelberg str. N4496	1054960	PRJNA69867	69867	Proteobacteria	Gammaproteobacteria	4.728	52.1	-	AMMQ01	368	4799	4729	3/27/14	6/13/14	Contig	FDA	SAMN01087997	GCA_000603425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/425/GCA_000603425.1_ASM60342v1	24732280	N4496
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.8742	32.7	-	NDQF01	81	2985	2863	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698133	GCA_002123395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/395/GCA_002123395.1_ASM212339v1	28446577	CFSA191
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.13695	39.6	-	FHJD01	46	2371	2112	2/10/16	3/13/17	Scaffold	SC	SAMEA2335953	GCA_900058925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/925/GCA_900058925.1_12291_4_21	-	2245STDY5699046
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.98995	39.8	-	FHJE01	48	2191	1930	2/10/16	3/13/17	Scaffold	SC	SAMEA2335955	GCA_900058935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/935/GCA_900058935.1_12291_4_23	-	2245STDY5699048
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.82944	32.6	-	NDQG01	66	2965	2809	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698132	GCA_002123435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/435/GCA_002123435.1_ASM212343v1	28446577	CFSA190
Salmonella enterica subsp. enterica serovar Heidelberg str. N4403	1054963	PRJNA69861	69861	Proteobacteria	Gammaproteobacteria	4.84647	52.1	-	AMMT01	260	4813	4735	3/27/14	6/13/14	Contig	FDA	SAMN01088000	GCA_000603445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/445/GCA_000603445.1_ASM60344v1	24732280	N4403
Salmonella enterica subsp. enterica serovar Heidelberg str. N4541	1054965	PRJNA69857	69857	Proteobacteria	Gammaproteobacteria	4.66376	52.2	-	AMMV01	650	4887	4819	3/27/14	6/13/14	Contig	FDA	SAMN01088002	GCA_000603465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/465/GCA_000603465.1_ASM60346v1	24732280	N4541
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.87798	32.6	-	NDQK01	51	3003	2886	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698128	GCA_002123455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/455/GCA_002123455.1_ASM212345v1	28446577	CFSA170
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.10584	39.6	-	FHJJ01	39	2323	2077	2/10/16	3/13/17	Scaffold	SC	SAMEA2335961	GCA_900058945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/945/GCA_900058945.1_12291_4_29	-	2245STDY5699054
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.98852	39.8	-	FHJL01	48	2193	1936	2/10/16	3/13/17	Scaffold	SC	SAMEA2335962	GCA_900058955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/955/GCA_900058955.1_12291_4_30	-	2245STDY5699055
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.79017	32.8	-	NDQH01	79	2869	2750	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698131	GCA_002123465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/465/GCA_002123465.1_ASM212346v1	28446577	CFSA189
Salmonella enterica subsp. enterica serovar Heidelberg str. 41576	1128960	PRJNA80515	80515	Proteobacteria	Gammaproteobacteria	4.90258	52.1	-	AMNH01	189	4722	4648	3/27/14	6/13/14	Contig	FDA	SAMN01088014	GCA_000603645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/645/GCA_000603645.1_ASM60364v1	24732280	41576
Salmonella enterica subsp. enterica serovar Heidelberg str. 24393	1124943	PRJNA78491	78491	Proteobacteria	Gammaproteobacteria	4.97329	51.8	-	AMNM01	154	4793	4724	3/27/14	6/13/14	Contig	FDA	SAMN01088019	GCA_000603745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/603/745/GCA_000603745.1_ASM60374v1	24732280	24393
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.77641	32.9	-	NDQI01	393	2909	2742	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698130	GCA_002123475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/475/GCA_002123475.1_ASM212347v1	28446577	CFSA173
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.05239	39.5	-	FHJN01	37	2265	2029	2/10/16	3/13/17	Scaffold	SC	SAMEA2335964	GCA_900058965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/965/GCA_900058965.1_12838_1_69	-	2245STDY5699057
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.03372	39.7	-	FHOZ01	32	2224	2003	2/10/16	3/5/17	Scaffold	SC	SAMEA2521515	GCA_900058975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/975/GCA_900058975.1_13414_1_59	-	2245STDY5819480
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.74362	32.7	-	NDQM01	40	2803	2672	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698126	GCA_002123505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/505/GCA_002123505.1_ASM212350v1	28446577	CFSA168
Salmonella enterica subsp. enterica serovar Typhimurium str. JCM 1652	1236523	PRJDB611	243189	Proteobacteria	Gammaproteobacteria	4.74727	52.1	-	BAKU01	87	-	-	4/1/14	9/15/15	Contig	The University of Tokyo	SAMD00009942	GCA_000614485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/614/485/GCA_000614485.1_ASM61448v1	-	JCM 1652
Salmonella enterica subsp. enterica serovar Cerro FSL R8-0235	1094506	PRJNA73959	73959	Proteobacteria	Gammaproteobacteria	4.67582	52.1	-	JMIJ01	126	4455	4410	4/30/14	6/4/14	Contig	Cornell University	SAMN01908570	GCA_000658985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/658/985/GCA_000658985.1_ASM65898v1	24898914	FSL R8-0235
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.66203	32.9	-	NDQR01	813	2801	2594	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698121	GCA_002123535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/535/GCA_002123535.1_ASM212353v1	28446577	CFSA163
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.11369	39.5	-	FHPA01	26	2336	2083	2/10/16	3/13/17	Scaffold	SC	SAMEA2521516	GCA_900058985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/985/GCA_900058985.1_13414_1_60	-	2245STDY5819481
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.96878	39.8	-	FHQN01	34	2185	1952	2/10/16	3/13/17	Scaffold	SC	SAMEA2521569	GCA_900058995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/995/GCA_900058995.1_13414_2_18	-	2245STDY5819535
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.87739	32.6	-	NDQS01	65	3003	2887	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698120	GCA_002123545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/545/GCA_002123545.1_ASM212354v1	28446577	CFSA162
Salmonella enterica subsp. enterica serovar Montevideo str. FVM_628064	1173877	PRJNA161681	161681	Proteobacteria	Gammaproteobacteria	4.55204	52.3	-	JMMJ01	598	4396	4114	6/5/14	6/5/14	Contig	FDA	SAMN01816294	GCA_000698655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/655/GCA_000698655.1_CFSAN000884_01.0	-	FVM_628064
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000226	1173421	PRJNA159267	159267	Proteobacteria	Gammaproteobacteria	4.6597	52.2	-	JMMN01	244	4342	3628	6/5/14	6/5/14	Contig	FDA	SAMN01816223	GCA_000698735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/735/GCA_000698735.1_CFSAN000226_02.0	-	CFSAN000226
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.75504	32.8	-	NDQT01	39	2842	2686	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698119	GCA_002123565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/565/GCA_002123565.1_ASM212356v1	28446577	CFSA161
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.9812	39.7	-	FHTG01	26	2178	1955	2/10/16	3/13/17	Scaffold	SC	SAMEA2521665	GCA_900059005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/005/GCA_900059005.1_13414_3_19	-	2245STDY5819632
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.09444	39.6	-	FIUZ01	39	2341	2091	2/10/16	3/13/17	Scaffold	SC	SAMEA1033708	GCA_900059225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/225/GCA_900059225.1_6972_8_29	-	A31105
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.77454	32.7	-	NDQU01	82	2856	2655	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698118	GCA_002123575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/575/GCA_002123575.1_ASM212357v1	28446577	CFSA160
Salmonella enterica subsp. enterica serovar Heidelberg str. RI-11-014316	1054953	PRJNA69881	69881	Proteobacteria	Gammaproteobacteria	4.69803	52.1	-	AMML01	590	4762	4700	6/9/14	6/9/14	Contig	FDA	SAMN01087990	GCA_000699645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/699/645/GCA_000699645.1_ASM69964v1	-	RI-11-014316
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000230	1173448	PRJNA159321	159321	Proteobacteria	Gammaproteobacteria	4.63455	52.2	-	JRCX01	173	4327	3702	9/5/14	9/5/14	Contig	FDA	SAMN01816228	GCA_000748585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/585/GCA_000748585.1_CFSAN000230_01.0	-	CFSAN000230
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.71025	32.7	-	NDQX01	31	2802	2663	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698115	GCA_002123615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/615/GCA_002123615.1_ASM212361v1	28446577	CFSA157
Streptococcus pneumoniae	1313	PRJEB2102	203746	Terrabacteria group	Firmicutes	2.13269	39.6	-	FIVI01	67	2355	2113	2/10/16	3/13/17	Scaffold	SC	SAMEA1012521	GCA_900059235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/235/GCA_900059235.1_4880_1_1	-	D28324
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.02975	39.6	-	FHHL01	25	2223	2001	2/10/16	3/12/17	Scaffold	SC	SAMEA2203956	GCA_900059275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/275/GCA_900059275.1_11657_4_42	-	2245STDY5609097
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.80081	32.8	-	NDRA01	37	2877	2760	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698112	GCA_002123635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/635/GCA_002123635.1_ASM212363v1	28446577	CFSA154
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000232	1173478	PRJNA159381	159381	Proteobacteria	Gammaproteobacteria	4.70103	52.1	-	JRCV01	211	4366	3507	9/5/14	9/5/14	Contig	FDA	SAMN01814046	GCA_000748625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/625/GCA_000748625.1_CFSAN000232_01.0	-	CFSAN000232
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000233	1173449	PRJNA159323	159323	Proteobacteria	Gammaproteobacteria	4.69295	52.2	-	JRCU01	188	4386	3748	9/5/14	9/5/14	Contig	FDA	SAMN01816229	GCA_000748645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/748/645/GCA_000748645.1_CFSAN000233_01.0	-	CFSAN000233
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78935	32.8	-	NDRF01	51	2868	2751	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698107	GCA_002123655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/655/GCA_002123655.1_ASM212365v1	28446577	CFSA149
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.10128	39.6	-	FHMN01	42	2319	2073	2/10/16	3/13/17	Scaffold	SC	SAMEA2467559	GCA_900059285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/285/GCA_900059285.1_13154_3_17	-	2245STDY5804460
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.9892	39.8	-	FHNT01	49	2191	1934	2/10/16	3/8/17	Scaffold	SC	SAMEA2467739	GCA_900059295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/295/GCA_900059295.1_13154_3_60	-	2245STDY5804508
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.75904	32.8	-	NDRB01	38	2840	2723	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698111	GCA_002123665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/665/GCA_002123665.1_ASM212366v1	28446577	CFSA153
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000229	1173422	PRJNA159269	159269	Proteobacteria	Gammaproteobacteria	4.67008	52.2	-	JRLR01	204	4350	3751	9/25/14	9/25/14	Contig	FDA	SAMN01816224	GCA_000757935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/757/935/GCA_000757935.1_CFSAN000229_01.0	-	CFSAN000229
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJNA243843	243843	Proteobacteria	Gammaproteobacteria	3.82575	51.8	-	JPIO01	716	3611	1744	9/29/14	9/29/14	Contig	"College of Fisheries, Karnataka Veterinary, Animal and Fisheries Sciences University"	SAMN02730065	GCA_000759635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/635/GCA_000759635.1_ASM75963v1	-	SW9
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.82797	32.8	-	NDRG01	56	2940	2811	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698106	GCA_002123695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/695/GCA_002123695.1_ASM212369v1	28446577	CFSA148
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04957	39.7	-	FHOO01	45	2262	2032	2/10/16	3/12/17	Scaffold	SC	SAMEA2467767	GCA_900059305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/305/GCA_900059305.1_13154_3_88	-	2245STDY5804536
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04617	39.7	-	FHQO01	40	2254	2029	2/10/16	3/13/17	Scaffold	SC	SAMEA2521571	GCA_900059315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/315/GCA_900059315.1_13414_2_20	-	2245STDY5819537
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78877	32.8	-	NDRH01	48	2863	2747	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698105	GCA_002123715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/715/GCA_002123715.1_ASM212371v1	28446577	CFSA147
Salmonella enterica subsp. enterica serovar Gallinarum	594	PRJNA265820	265820	Proteobacteria	Gammaproteobacteria	4.68663	52.2	-	JSWQ01	82	4570	4186	12/16/14	11/5/15	Contig	"Veterinary Type Culture Collection, NRCE, Sirsa Road, Hisar"	SAMN03152430	GCA_000801935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/801/935/GCA_000801935.1_ASM80193v1	26494667	VTCCBAA614
Salmonella enterica subsp. enterica serovar Heidelberg str. RI-11-013374	1037257	PRJNA67429	67429	Proteobacteria	Gammaproteobacteria	4.69575	52.1	-	AMME01	744	5023	4955	3/24/15	3/24/15	Contig	FDA	SAMN01087982	GCA_000962125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/125/GCA_000962125.1_ASM96212v1	25479838	RI-11-013374
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.80227	32.8	-	NDRK01	49	2875	2762	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698102	GCA_002123735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/735/GCA_002123735.1_ASM212373v1	28446577	CFSA144
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0893	39.7	-	FHQP01	36	2310	2084	2/10/16	3/6/17	Scaffold	SC	SAMEA2521572	GCA_900059325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/325/GCA_900059325.1_13414_2_21	-	2245STDY5819538
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06453	39.7	-	FHQQ01	35	2272	2031	2/10/16	3/12/17	Scaffold	SC	SAMEA2521573	GCA_900059335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/335/GCA_900059335.1_13414_2_22	-	2245STDY5819539
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.80871	32.7	-	NDRJ01	67	2895	2772	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698103	GCA_002123745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/745/GCA_002123745.1_ASM212374v1	28446577	CFSA145
Salmonella enterica subsp. enterica serovar Heidelberg str. 622737-11	1037259	PRJNA67433	67433	Proteobacteria	Gammaproteobacteria	4.73918	52.1	-	AMMG01	164	4664	4586	3/24/15	3/24/15	Contig	FDA	SAMN01087984	GCA_000962145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/145/GCA_000962145.1_ASM96214v1	25479838	622737-11
Salmonella enterica subsp. enterica serovar Heidelberg str. 607310-1	1037258	PRJNA67431	67431	Proteobacteria	Gammaproteobacteria	4.7309	52.1	-	AMMF01	558	4951	4885	3/24/15	3/24/15	Contig	FDA	SAMN01087983	GCA_000962165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/165/GCA_000962165.1_ASM96216v1	-	607310-1
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.85182	32.7	-	NDRM01	63	2951	2823	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698100	GCA_002123775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/775/GCA_002123775.1_ASM212377v1	28446577	CFSA142
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.1838	39.6	-	FHRQ01	30	2414	2166	2/10/16	3/13/17	Scaffold	SC	SAMEA2521609	GCA_900059345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/345/GCA_900059345.1_13414_2_58	-	2245STDY5819575
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99108	39.8	-	FHUC01	46	2194	1935	2/10/16	3/13/17	Scaffold	SC	SAMEA2796485	GCA_900059355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/355/GCA_900059355.1_14673_1_77	-	2245STDY5982506
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.83746	32.6	-	NDRL01	60	2937	2819	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698101	GCA_002123785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/785/GCA_002123785.1_ASM212378v1	28446577	CFSA143
Salmonella enterica subsp. enterica serovar Heidelberg str. 579082-8	1037261	PRJNA67435	67435	Proteobacteria	Gammaproteobacteria	4.73927	52.1	-	AMMH01	198	4666	4598	3/24/15	3/24/15	Contig	FDA	SAMN01087985	GCA_000962175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/175/GCA_000962175.1_ASM96217v1	25479838	579082-8
Salmonella enterica subsp. enterica serovar Heidelberg str. 579083-19	1054949	PRJNA69889	69889	Proteobacteria	Gammaproteobacteria	4.83234	52.1	-	AMMI01	418	4903	4828	3/24/15	3/24/15	Contig	FDA	SAMN01087986	GCA_000962205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/205/GCA_000962205.1_ASM96220v1	-	579083-19
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.81923	32.8	-	NDRN01	90	2959	2761	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698099	GCA_002123795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/795/GCA_002123795.1_ASM212379v1	28446577	CFSA141
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0525	39.7	-	FHUE01	39	2256	1996	2/10/16	3/13/17	Scaffold	SC	SAMEA2796488	GCA_900059365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/365/GCA_900059365.1_14673_1_80	-	2245STDY5982509
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.98984	39.8	-	FHUI01	51	2188	1935	2/10/16	3/15/17	Scaffold	SC	SAMEA2796493	GCA_900059375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/375/GCA_900059375.1_14673_1_85	-	2245STDY5982514
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.758	32.7	-	NDRO01	29	2872	2740	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698098	GCA_002123805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/805/GCA_002123805.1_ASM212380v1	28446577	CFSA140
Salmonella enterica subsp. enterica serovar Heidelberg str. RI-11-013343	1054951	PRJNA69885	69885	Proteobacteria	Gammaproteobacteria	4.70788	52.1	-	AMMK01	534	4814	4749	3/24/15	3/24/15	Contig	FDA	SAMN01087988	GCA_000962225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/225/GCA_000962225.1_ASM96222v1	-	RI-11-013343
Salmonella enterica subsp. enterica serovar Heidelberg str. RI-11-014588	1054954	PRJNA69879	69879	Proteobacteria	Gammaproteobacteria	4.70738	52.1	-	AMMM01	463	4831	4765	3/24/15	3/24/15	Contig	FDA	SAMN01087991	GCA_000962235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/235/GCA_000962235.1_ASM96223v1	25479838	RI-11-014588
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.73602	32.7	-	NDRP01	38	2860	2703	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698097	GCA_002123855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/855/GCA_002123855.1_ASM212385v1	28446577	CFSA139
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.01393	39.8	-	FHIG01	21	2250	2013	2/10/16	3/15/17	Scaffold	SC	SAMEA2204016	GCA_900059625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/625/GCA_900059625.1_11657_8_32	-	2245STDY5609157
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06152	39.5	-	FHIO01	39	2270	2034	2/10/16	3/13/17	Scaffold	SC	SAMEA2204022	GCA_900059635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/635/GCA_900059635.1_11657_4_57	-	2245STDY5609163
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.84596	32.7	-	NDRS01	80	2992	2802	5/10/17	5/23/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698094	GCA_002123865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/865/GCA_002123865.1_ASM212386v1	28446577	CFSA136
Salmonella enterica subsp. enterica serovar Heidelberg str. 622737-12	1054955	PRJNA69877	69877	Proteobacteria	Gammaproteobacteria	4.72067	52.1	-	AMMN01	417	4801	4731	3/24/15	3/24/15	Contig	FDA	SAMN01087992	GCA_000962275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/275/GCA_000962275.1_ASM96227v1	-	622737-12
Salmonella enterica subsp. enterica serovar Heidelberg str. 622737-14	1054956	PRJNA69875	69875	Proteobacteria	Gammaproteobacteria	4.72342	52.1	-	AMMO01	311	4713	4643	3/24/15	3/24/15	Contig	FDA	SAMN01087993	GCA_000962305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/305/GCA_000962305.1_ASM96230v1	-	622737-14
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.83935	32.7	-	NDRT01	77	2964	2851	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698093	GCA_002123875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/875/GCA_002123875.1_ASM212387v1	28446577	CFSA135
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06916	39.6	-	FHIN01	36	2243	2017	2/10/16	3/13/17	Scaffold	SC	SAMEA2204023	GCA_900059645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/645/GCA_900059645.1_11511_8_58	-	2245STDY5609164
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.23017	39.5	-	FHKE01	266	2445	2129	2/10/16	3/6/17	Scaffold	SC	SAMEA2335983	GCA_900059655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/655/GCA_900059655.1_12291_4_51	-	2245STDY5699076
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.68968	32.8	-	NDRU01	36	2740	2625	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698092	GCA_002123885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/885/GCA_002123885.1_ASM212388v1	28446577	CFSA134
Salmonella enterica subsp. enterica serovar Heidelberg str. 75-3547	1173834	PRJNA161405	161405	Proteobacteria	Gammaproteobacteria	4.70725	52.2	-	AMNV01	153	4510	4437	3/24/15	3/24/15	Contig	FDA	SAMN01088028	GCA_000962365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/365/GCA_000962365.1_ASM96236v1	-	75-3547
Salmonella enterica subsp. enterica serovar Heidelberg str. 76-0300	1173835	PRJNA161407	161407	Proteobacteria	Gammaproteobacteria	4.70882	52.2	-	AMNW01	176	4512	4436	3/24/15	3/24/15	Contig	FDA	SAMN01088029	GCA_000962395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/395/GCA_000962395.1_ASM96239v1	-	76-0300
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.74203	32.7	-	NDRV01	38	2827	2723	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698091	GCA_002123935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/935/GCA_002123935.1_ASM212393v1	28446577	CFSA132
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.98604	39.8	-	FHKD01	49	2183	1924	2/10/16	3/13/17	Scaffold	SC	SAMEA2335982	GCA_900059665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/665/GCA_900059665.1_12291_4_50	-	2245STDY5699075
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.25873	39.4	-	FHLO01	301	2438	2124	2/10/16	3/15/17	Scaffold	SC	SAMEA2336026	GCA_900059675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/675/GCA_900059675.1_12291_5_4	-	2245STDY5699119
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.79314	32.8	-	NDRX01	96	2880	2759	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698089	GCA_002123955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/955/GCA_002123955.1_ASM212395v1	28446577	CFSA118
Salmonella enterica subsp. enterica serovar Heidelberg str. 77-2823	1173837	PRJNA161413	161413	Proteobacteria	Gammaproteobacteria	4.68842	52.2	-	AMNX01	111	4489	4417	3/24/15	3/24/15	Contig	FDA	SAMN01088030	GCA_000962405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/405/GCA_000962405.1_ASM96240v1	-	77-2823
Salmonella enterica subsp. enterica serovar Heidelberg str. 79-0480	1173838	PRJNA161415	161415	Proteobacteria	Gammaproteobacteria	4.70948	52.2	-	AMNZ01	145	4582	4509	3/24/15	3/24/15	Contig	FDA	SAMN01088032	GCA_000962435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/435/GCA_000962435.1_ASM96243v1	-	79-0480
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.88323	32.6	-	NDRW01	132	3019	2889	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698090	GCA_002123965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/965/GCA_002123965.1_ASM212396v1	28446577	CFSA119
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0114	39.7	-	FHLQ01	17	2206	1984	2/10/16	3/13/17	Scaffold	SC	SAMEA2336066	GCA_900059685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/685/GCA_900059685.1_12291_5_44	-	2245STDY5699161
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06717	39.6	-	FHLR01	19	2275	2039	2/10/16	3/13/17	Scaffold	SC	SAMEA2336028	GCA_900059695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/695/GCA_900059695.1_12291_5_6	-	2245STDY5699121
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.82665	32.8	-	NDRY01	84	2936	2805	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698088	GCA_002123985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/123/985/GCA_002123985.1_ASM212398v1	28446577	CFSA117
Salmonella enterica subsp. enterica serovar Heidelberg str. 77-1831	1173836	PRJNA161411	161411	Proteobacteria	Gammaproteobacteria	4.81156	52.1	-	AMNY01	174	4636	4560	3/24/15	3/24/15	Contig	FDA	SAMN01088031	GCA_000962595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/962/595/GCA_000962595.1_ASM96259v1	-	77-1831
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA266093	266093	Proteobacteria	Gammaproteobacteria	4.74473	52.2	-	LDYH01	8	4606	3551	6/10/15	8/27/15	Contig	IZSAM	SAMN03162140	GCA_001026705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/026/705/GCA_001026705.1_ASM102670v1	-	smonpas0031082
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.88139	32.6	-	NDSA01	120	3026	2895	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698086	GCA_002124015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/015/GCA_002124015.1_ASM212401v1	28446577	CFSA115
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.1223	39.6	-	FHVK01	64	2343	2092	2/10/16	3/13/17	Scaffold	SC	SAMEA2796721	GCA_900059705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/705/GCA_900059705.1_14673_4_28	-	2245STDY5982747
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.13548	39.6	-	FHGJ01	50	2365	2116	2/10/16	3/13/17	Scaffold	SC	SAMEA2203921	GCA_900059825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/825/GCA_900059825.1_11511_8_46	-	2245STDY5609061
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.85193	32.6	-	NDSE01	98	2978	2868	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698082	GCA_002124055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/055/GCA_002124055.1_ASM212405v1	28446577	CFSA111
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA266093	266093	Proteobacteria	Gammaproteobacteria	4.74406	52.2	-	LECA01	10	4599	3799	6/12/15	8/27/15	Contig	IZSAM	SAMN03162151	GCA_001027585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/585/GCA_001027585.1_ASM102758v1	-	smonpas008251-3
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA266093	266093	Proteobacteria	Gammaproteobacteria	4.74546	52.2	-	LECB01	14	4618	3474	6/12/15	8/27/15	Contig	IZSAM	SAMN03162153	GCA_001027595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/595/GCA_001027595.1_ASM102759v1	-	smonpas008251-5
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.87587	32.6	-	NDSK01	85	3003	2881	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698076	GCA_002124065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/065/GCA_002124065.1_ASM212406v1	28446577	CFSA105
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06424	39.5	-	FHMV01	37	2272	2034	2/10/16	3/13/17	Scaffold	SC	SAMEA2467575	GCA_900059835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/835/GCA_900059835.1_13154_3_31	-	2245STDY5804476
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.21088	39.8	-	FHNN01	362	2392	2044	2/10/16	3/13/17	Scaffold	SC	SAMEA2467729	GCA_900059845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/845/GCA_900059845.1_13154_3_50	-	2245STDY5804498
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.86198	32.7	-	NDSL01	61	2985	2843	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698075	GCA_002124095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/095/GCA_002124095.1_ASM212409v1	28446577	CFSA104
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA266093	266093	Proteobacteria	Gammaproteobacteria	4.74664	52.2	-	LECC01	12	4607	3825	6/12/15	8/27/15	Contig	IZSAM	SAMN03162156	GCA_001027605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/605/GCA_001027605.1_ASM102760v1	-	smonpas009865-1
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA266093	266093	Proteobacteria	Gammaproteobacteria	4.74959	52.2	-	LECD01	14	4616	3707	6/12/15	8/27/15	Contig	IZSAM	SAMN03162157	GCA_001027615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/027/615/GCA_001027615.1_ASM102761v1	-	smonpas001102-2
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.92086	32.6	-	NDSM01	72	3070	2951	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698074	GCA_002124105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/105/GCA_002124105.1_ASM212410v1	28446577	CFSA103
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.15508	39.4	-	FHPH01	70	2355	2094	2/10/16	3/13/17	Scaffold	SC	SAMEA2521526	GCA_900059855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/855/GCA_900059855.1_13414_1_70	-	2245STDY5819491
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.96608	39.8	-	FHRD01	35	2188	1944	2/10/16	3/8/17	Scaffold	SC	SAMEA2521591	GCA_900059865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/059/865/GCA_900059865.1_13414_2_40	-	2245STDY5819557
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.77277	32.8	-	NDSP01	59	2873	2748	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698071	GCA_002124135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/135/GCA_002124135.1_ASM212413v1	28446577	CFSA098
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA266093	266093	Proteobacteria	Gammaproteobacteria	4.75663	52.2	-	LFCI01	13	4621	3780	6/22/15	8/27/15	Contig	IZSAM	SAMN03162148	GCA_001034525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/525/GCA_001034525.1_ASM103452v1	26294627	smonpas004260-1
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA266093	266093	Proteobacteria	Gammaproteobacteria	4.82031	52.2	-	LFCH01	28	4692	3635	6/22/15	8/27/15	Contig	IZSAM	SAMN03162144	GCA_001034545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/545/GCA_001034545.1_ASM103454v1	26294627	smonpas003168-4
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.77734	32.8	-	NDSN01	71	2857	2735	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698073	GCA_002124145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/145/GCA_002124145.1_ASM212414v1	28446577	CFSA102
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99013	39.7	-	FHPI01	20	2189	1964	2/10/16	3/13/17	Scaffold	SC	SAMEA2521532	GCA_900060055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/055/GCA_900060055.1_13414_1_76	-	2245STDY5819497
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.13003	39.6	-	FHUY01	32	2357	2104	2/10/16	3/6/17	Scaffold	SC	SAMEA2796709	GCA_900060065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/065/GCA_900060065.1_14673_4_16	-	2245STDY5982735
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.82519	32.8	-	NDSO01	106	2943	2790	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698072	GCA_002124155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/155/GCA_002124155.1_ASM212415v1	28446577	CFSA101
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA266093	266093	Proteobacteria	Gammaproteobacteria	4.74246	52.2	-	LFCG01	10	4606	3536	6/22/15	8/27/15	Contig	IZSAM	SAMN03162141	GCA_001034565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/565/GCA_001034565.1_ASM103456v1	26294627	smonpas001102-13
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA266093	266093	Proteobacteria	Gammaproteobacteria	4.74295	52.2	-	LFDZ01	14	4615	3409	6/22/15	8/27/15	Contig	IZSAM	SAMN03162145	GCA_001034585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/585/GCA_001034585.1_ASM103458v1	26294627	smonpas003168-5
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.92486	32.6	-	NDSR01	58	3073	2951	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698069	GCA_002124195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/195/GCA_002124195.1_ASM212419v1	28446577	CFSA096
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0404	39.6	-	FHVA01	32	2224	1996	2/10/16	3/13/17	Scaffold	SC	SAMEA2796711	GCA_900060075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/075/GCA_900060075.1_14673_4_18	-	2245STDY5982737
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.11293	39.6	-	FHKZ01	40	2328	2103	2/10/16	3/13/17	Scaffold	SC	SAMEA2336009	GCA_900060245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/245/GCA_900060245.1_12291_4_77	-	2245STDY5699102
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.71658	32.7	-	NDSX01	60	2767	2655	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698063	GCA_002124215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/215/GCA_002124215.1_ASM212421v1	28446577	CFSA090
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA266093	266093	Proteobacteria	Gammaproteobacteria	4.74124	52.2	-	LFDX01	11	4589	3719	6/22/15	8/27/15	Contig	IZSAM	SAMN03162147	GCA_001034595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/595/GCA_001034595.1_ASM103459v1	26294627	smonpas004260-10
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA266093	266093	Proteobacteria	Gammaproteobacteria	4.74339	52.2	-	LFDW01	11	4596	3906	6/22/15	8/27/15	Contig	IZSAM	SAMN03162150	GCA_001034605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/605/GCA_001034605.1_ASM103460v1	26294627	smonpas003168-1
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.87433	32.7	-	NDST01	48	3006	2863	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698067	GCA_002124225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/225/GCA_002124225.1_ASM212422v1	28446577	CFSA094
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.17254	39.7	-	FHNJ01	251	2365	2110	2/10/16	3/13/17	Scaffold	SC	SAMEA2467724	GCA_900060255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/255/GCA_900060255.1_13154_3_45	-	2245STDY5804493
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.01946	39.7	-	FHSF01	38	2210	1973	2/10/16	3/13/17	Scaffold	SC	SAMEA2521621	GCA_900060265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/265/GCA_900060265.1_13414_2_70	-	2245STDY5819587
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.77615	32.8	-	NDSU01	76	2874	2736	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698066	GCA_002124245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/245/GCA_002124245.1_ASM212424v1	28446577	CFSA093
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA266093	266093	Proteobacteria	Gammaproteobacteria	4.82603	52.3	-	LFDY01	28	4706	3758	6/22/15	8/27/15	Contig	IZSAM	SAMN03162146	GCA_001034615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/034/615/GCA_001034615.1_ASM103461v1	26294627	smonpas004260-8
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA266093	266093	Proteobacteria	Gammaproteobacteria	4.78151	52.2	-	LFGN01	17	4662	4114	6/23/15	8/27/15	Contig	IZSAM	SAMN03162161	GCA_001038035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/035/GCA_001038035.1_ASM103803v1	26294627	smonpas004260-17
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.73451	32.8	-	NDSY01	61	2801	2618	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698062	GCA_002124265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/265/GCA_002124265.1_ASM212426v1	28446577	CFSA089
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.13195	39.5	-	FHSJ01	39	2364	2112	2/10/16	3/12/17	Scaffold	SC	SAMEA2521626	GCA_900060275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/275/GCA_900060275.1_13414_2_75	-	2245STDY5819592
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08816	39.6	-	FHUV01	43	2324	2065	2/10/16	3/13/17	Scaffold	SC	SAMEA2796706	GCA_900060285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/285/GCA_900060285.1_14673_4_13	-	2245STDY5982732
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.79127	32.8	-	NDSZ01	53	2890	2756	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698061	GCA_002124295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/295/GCA_002124295.1_ASM212429v1	28446577	CFSA088
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA266093	266093	Proteobacteria	Gammaproteobacteria	4.76042	52.2	-	LFGP01	20	4631	3891	6/23/15	8/27/15	Contig	IZSAM	SAMN03162159	GCA_001038085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/085/GCA_001038085.1_ASM103808v1	26294627	smonpas007416-3
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA266093	266093	Proteobacteria	Gammaproteobacteria	4.7437	52.2	-	LFGO01	11	4601	3678	6/23/15	8/27/15	Contig	IZSAM	SAMN03162160	GCA_001038095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/095/GCA_001038095.1_ASM103809v1	26294627	smonpas007416-4
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.83471	32.7	-	NDTA01	68	2922	2805	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698060	GCA_002124315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/315/GCA_002124315.1_ASM212431v1	28446577	CFSA087
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.11242	39.6	-	FHUW01	39	2312	2083	2/10/16	3/13/17	Scaffold	SC	SAMEA2796707	GCA_900060295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/295/GCA_900060295.1_14673_4_14	-	2245STDY5982733
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06319	39.6	-	FHGO01	34	2275	2024	2/10/16	3/13/17	Scaffold	SC	SAMEA2203928	GCA_900060505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/505/GCA_900060505.1_11657_4_38	-	2245STDY5609068
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.73759	32.8	-	NDTB01	37	2792	2649	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698059	GCA_002124325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/325/GCA_002124325.1_ASM212432v1	28446577	CFSA086
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA266093	266093	Proteobacteria	Gammaproteobacteria	4.74577	52.2	-	LFGR01	13	4597	3828	6/23/15	8/27/15	Contig	IZSAM	SAMN03162155	GCA_001038105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/105/GCA_001038105.1_ASM103810v1	26294627	smonpas009854
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA266093	266093	Proteobacteria	Gammaproteobacteria	4.74747	52.2	-	LFGQ01	15	4605	3820	6/23/15	8/27/15	Contig	IZSAM	SAMN03162158	GCA_001038115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/115/GCA_001038115.1_ASM103811v1	26294627	smonpas001102-11
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.82251	32.8	-	NDTC01	111	2932	2796	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698058	GCA_002124355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/355/GCA_002124355.1_ASM212435v1	28446577	CFSA085
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.9895	39.8	-	FHLN01	46	2188	1935	2/10/16	3/13/17	Scaffold	SC	SAMEA2336027	GCA_900060515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/515/GCA_900060515.1_12291_5_5	-	2245STDY5699120
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.98577	39.8	-	FHLP01	47	2194	1931	2/10/16	3/13/17	Scaffold	SC	SAMEA2336063	GCA_900060525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/525/GCA_900060525.1_12291_5_41	-	2245STDY5699157
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.8791	32.6	-	NDOW01	79	3013	2884	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698168	GCA_002124365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/365/GCA_002124365.1_ASM212436v1	28446577	CFSA226
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA266093	266093	Proteobacteria	Gammaproteobacteria	4.74484	52.2	-	LFGM01	14	4604	3822	6/23/15	8/27/15	Contig	IZSAM	SAMN03162162	GCA_001038165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/038/165/GCA_001038165.1_ASM103816v1	26294627	smonpas006644-5
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA266093	266093	Proteobacteria	Gammaproteobacteria	4.76384	52.2	-	LDPA01	9	4629	3863	6/29/15	8/27/15	Contig	IZSAM	SAMN03162139	GCA_001042425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/042/425/GCA_001042425.1_ASM104242v1	26294627	smonpas0023280
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.88119	32.6	-	NDPA01	57	3004	2887	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698164	GCA_002124395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/395/GCA_002124395.1_ASM212439v1	28446577	CFSA222
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.12233	39.5	-	FHQT01	47	2374	2108	2/10/16	3/13/17	Scaffold	SC	SAMEA2521574	GCA_900060535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/535/GCA_900060535.1_13414_2_23	-	2245STDY5819540
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0582	39.6	-	FHQU01	21	2271	2032	2/10/16	3/12/17	Scaffold	SC	SAMEA2521577	GCA_900060545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/545/GCA_900060545.1_13414_2_26	-	2245STDY5819543
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78061	32.7	-	NDOX01	83	2895	2737	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698167	GCA_002124405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/405/GCA_002124405.1_ASM212440v1	28446577	CFSA225
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.43385	51.7	-	LHHL01	149	5420	5259	8/5/15	8/5/15	Contig	FDA	SAMN03894182	GCA_001242645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/645/GCA_001242645.1_Salmonella_enterica_CVM_N45951_v1.0	-	CVM N45951
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.42527	51.8	-	LHHQ01	132	5407	5243	8/5/15	8/5/15	Contig	FDA	SAMN03894187	GCA_001242785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/242/785/GCA_001242785.1_Salmonella_enterica_CVM_N45956_v1.0	-	CVM N45956
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.8104	32.8	-	NDPB01	75	2880	2749	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698163	GCA_002124435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/435/GCA_002124435.1_ASM212443v1	28446577	CFSA221
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04913	39.7	-	FHQV01	44	2261	2029	2/10/16	3/13/17	Scaffold	SC	SAMEA2521583	GCA_900060555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/555/GCA_900060555.1_13414_2_32	-	2245STDY5819549
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06379	39.6	-	FHQZ01	24	2284	2033	2/10/16	3/13/17	Scaffold	SC	SAMEA2521581	GCA_900060565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/565/GCA_900060565.1_13414_2_30	-	2245STDY5819547
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.92029	32.6	-	NDPF01	67	3060	2924	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698159	GCA_002124455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/455/GCA_002124455.1_ASM212445v1	28446577	CFSA217
Salmonella enterica subsp. enterica serovar Heidelberg	611	PRJNA242614	242614	Proteobacteria	Gammaproteobacteria	5.43007	51.8	-	LHME01	130	5414	5245	8/5/15	8/5/15	Contig	FDA	SAMN03894330	GCA_001245935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/935/GCA_001245935.1_Salmonella_enterica_CVM_N50450_v1.0	-	CVM N50450
Salmonella enterica subsp. enterica serovar Senftenberg	28150	PRJNA275139	275139	Proteobacteria	Gammaproteobacteria	5.62288	51.4	-	JZTU01	164	-	-	8/31/15	8/31/15	Contig	U.S. Food and Drug Administration	SAMN03339661	GCA_001276825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/276/825/GCA_001276825.1_ASM127682v1	26303940	50271
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.84413	32.6	-	NDPH01	56	2950	2836	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698157	GCA_002124475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/475/GCA_002124475.1_ASM212447v1	28446577	CFSA215
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.07832	39.6	-	FHQW01	36	2309	2048	2/10/16	3/13/17	Scaffold	SC	SAMEA2521584	GCA_900060575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/575/GCA_900060575.1_13414_2_33	-	2245STDY5819550
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0479	39.6	-	FHRF01	29	2265	2029	2/10/16	3/8/17	Scaffold	SC	SAMEA2521593	GCA_900060585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/585/GCA_900060585.1_13414_2_42	-	2245STDY5819559
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.8321	32.6	-	NDPN01	59	2945	2829	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698151	GCA_002124485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/485/GCA_002124485.1_ASM212448v1	28446577	CFSA209
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA264264	264264	Proteobacteria	Gammaproteobacteria	4.96501	52.2	-	JRZT01	251	4953	4501	9/22/15	9/22/15	Contig	The Chinese University of Hong Kong	SAMN03121898	GCA_001295585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/585/GCA_001295585.1_ASM129558v1	26370680	ST372
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA264268	264268	Proteobacteria	Gammaproteobacteria	4.94637	51.9	-	JRZP01	71	4824	4503	9/22/15	9/22/15	Contig	The Chinese University of Hong Kong	SAMN03121901	GCA_001295625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/295/625/GCA_001295625.1_ASM129562v1	26370680	ST2533
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.83364	32.6	-	NDPR01	52	2940	2825	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698147	GCA_002124515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/515/GCA_002124515.1_ASM212451v1	28446577	CFSA205
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07545	39.6	-	FHWR01	33	2285	2030	2/10/16	3/13/17	Scaffold	SC	SAMEA2160399	GCA_900060595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/595/GCA_900060595.1_10678_6_23	-	2690STDY5561860
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04613	39.8	-	FHIH01	40	2252	2025	2/10/16	3/5/17	Scaffold	SC	SAMEA2204011	GCA_900060815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/815/GCA_900060815.1_11657_4_53	-	2245STDY5609152
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.74522	32.7	-	NDPS01	62	2814	2632	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698146	GCA_002124535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/535/GCA_002124535.1_ASM212453v1	28446577	CFSA204
Salmonella enterica subsp. enterica	59201	PRJNA277983	277983	Proteobacteria	Gammaproteobacteria	6.06741	51.8	-	LKLB02	628	6251	5746	11/4/15	11/7/16	Contig	US Food and Drug Administration	SAMN04122660	GCA_001431385.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/431/385/GCA_001431385.2_ASM143138v2	-	F15M02184
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA301438	301438	Proteobacteria	Gammaproteobacteria	4.59426	52.3	-	LMZB01	54	4423	3686	11/12/15	3/16/16	Contig	Universidade Federal de Minas Gerais	SAMN04246332	GCA_001442675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/675/GCA_001442675.1_ASM144267v1	26798099	LPM-ST02
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.7291	32.8	-	NDPT01	37	2821	2651	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698145	GCA_002124555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/555/GCA_002124555.1_ASM212455v1	28446577	CFSA203
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.13178	39.7	-	FHJB01	264	2312	2015	2/10/16	3/13/17	Scaffold	SC	SAMEA2335949	GCA_900060825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/825/GCA_900060825.1_12291_4_17	-	2245STDY5699042
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04684	39.8	-	FHNE01	32	2246	2024	2/10/16	3/13/17	Scaffold	SC	SAMEA2467718	GCA_900060835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/835/GCA_900060835.1_13154_2_18	-	2245STDY5804487
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.75317	32.8	-	NDPV01	57	2836	2661	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698143	GCA_002124565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/565/GCA_002124565.1_ASM212456v1	28446577	CFSA201
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA301437	301437	Proteobacteria	Gammaproteobacteria	4.80196	52.2	-	LMZA01	82	4637	3710	11/12/15	3/16/16	Contig	Universidade Federal de Minas Gerais	SAMN04246331	GCA_001442695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/442/695/GCA_001442695.1_ASM144269v1	26798099	LPM-ST01
Salmonella enterica subsp. enterica serovar Moscow str. SA20061414	1243580	PRJNA177579	177579	Proteobacteria	Gammaproteobacteria	4.79287	52.1	-	LIXO01	81	4720	2905	11/27/15	4/5/16	Contig	Laboratory for Foodborne Zoonoses	SAMN03485881	GCA_001448545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/545/GCA_001448545.1_ASM144854v1	26941156	SA20061414
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.85796	32.7	-	NDPY01	126	3029	2822	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698140	GCA_002124595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/595/GCA_002124595.1_ASM212459v1	28446577	CFSA198
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99332	39.8	-	FHOH01	52	2196	1934	2/10/16	3/8/17	Scaffold	SC	SAMEA2467758	GCA_900060845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/845/GCA_900060845.1_13154_3_79	-	2245STDY5804527
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0441	39.8	-	FHOI01	163	2257	1968	2/10/16	3/13/17	Scaffold	SC	SAMEA2467760	GCA_900060855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/855/GCA_900060855.1_13154_3_81	-	2245STDY5804529
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78683	32.8	-	NDQB01	58	2890	2748	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698137	GCA_002124615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/615/GCA_002124615.1_ASM212461v1	28446577	CFSA195
Salmonella enterica subsp. enterica serovar Newport str. S09097	1243581	PRJNA177580	177580	Proteobacteria	Gammaproteobacteria	4.34793	51.8	-	LIXQ01	2494	3419	1667	11/27/15	11/27/15	Contig	Laboratory for Foodborne Zoonoses	SAMN03569080	GCA_001448555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/555/GCA_001448555.1_ASM144855v1	-	S09097
Salmonella enterica subsp. enterica serovar Blegdam	399583	PRJNA281081	281081	Proteobacteria	Gammaproteobacteria	4.71669	52.1	-	LHSP01	24	4638	4034	11/27/15	4/5/16	Contig	Laboratory for Foodborne Zoonoses	SAMN03482339	GCA_001448595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/595/GCA_001448595.1_ASM144859v1	26941156	SA20065575
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.87484	32.6	-	NDPZ01	83	3003	2875	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698139	GCA_002124625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/625/GCA_002124625.1_ASM212462v1	28446577	CFSA197
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06511	39.6	-	FHPN01	21	2248	2009	2/10/16	3/13/17	Scaffold	SC	SAMEA2521535	GCA_900060865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/865/GCA_900060865.1_13414_1_79	-	2245STDY5819500
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09831	39.6	-	FHQR01	43	2291	2053	2/10/16	3/13/17	Scaffold	SC	SAMEA2521576	GCA_900060875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/875/GCA_900060875.1_13414_2_25	-	2245STDY5819542
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.88012	32.6	-	NDQC01	83	3017	2898	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698136	GCA_002124655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/655/GCA_002124655.1_ASM212465v1	28446577	CFSA194
Salmonella enterica subsp. enterica serovar Hillingdon	1242081	PRJNA281112	281112	Proteobacteria	Gammaproteobacteria	4.68659	52.2	-	LHSX01	32	4502	3829	11/27/15	4/5/16	Contig	Laboratory for Foodborne Zoonoses	SAMN03579685	GCA_001448725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/725/GCA_001448725.1_ASM144872v1	26941156	S01-0588
Salmonella enterica subsp. enterica serovar Johannesburg str. SA20025782	1242697	PRJNA177247	177247	Proteobacteria	Gammaproteobacteria	4.2428	52.2	-	LHSZ01	274	4262	1783	11/27/15	4/5/16	Contig	Laboratory for Foodborne Zoonoses	SAMN03468069	GCA_001448735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/735/GCA_001448735.1_ASM144873v1	26941156	SA20025782
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.71788	32.7	-	NDQJ01	49	2804	2652	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698129	GCA_002124675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/675/GCA_002124675.1_ASM212467v1	28446577	CFSA171
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08609	39.7	-	FHSD01	20	2301	2082	2/10/16	3/13/17	Scaffold	SC	SAMEA2521619	GCA_900060885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/885/GCA_900060885.1_13414_2_68	-	2245STDY5819585
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0025	39.7	-	FHUN01	28	2178	1957	2/10/16	3/13/17	Scaffold	SC	SAMEA2796498	GCA_900060895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/895/GCA_900060895.1_14673_1_90	-	2245STDY5982519
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.92609	32.6	-	NDQL01	85	3071	2955	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698127	GCA_002124685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/685/GCA_002124685.1_ASM212468v1	28446577	CFSA169
Salmonella enterica subsp. enterica serovar Newport str. L0167	1243582	PRJNA177581	177581	Proteobacteria	Gammaproteobacteria	4.80031	52.1	-	LIXP01	191	4672	2512	11/27/15	4/5/16	Contig	Laboratory for Foodborne Zoonoses	SAMN03569079	GCA_001448965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/448/965/GCA_001448965.1_ASM144896v1	26941156	L0167
Salmonella enterica subsp. enterica	59201	PRJNA285120	285120	Proteobacteria	Gammaproteobacteria	5.04669	52.1	-	LFCE01	109	4994	4267	12/4/15	4/6/16	Contig	California Department of Public Health	SAMN03738087	GCA_001456375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/375/GCA_001456375.1_ASM145637v1	27013038	F12M01383-1
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.7696	32.8	-	NDQN01	70	2806	2688	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698125	GCA_002124695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/695/GCA_002124695.1_ASM212469v1	28446577	CFSA167
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07711	39.6	-	FHXW01	28	2281	2032	2/10/16	3/13/17	Scaffold	SC	SAMEA2153075	GCA_900060925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/925/GCA_900060925.1_10678_6_55	-	2690STDY5561914
Streptococcus pneumoniae	1313	PRJEB2102	203746	Terrabacteria group	Firmicutes	2.10196	39.6	-	FIUX01	42	2351	2092	2/10/16	3/12/17	Scaffold	SC	SAMEA685588	GCA_900061085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/085/GCA_900061085.1_4525_7_8	-	D28368
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.87922	32.6	-	NDQO01	54	3006	2887	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698124	GCA_002124735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/735/GCA_002124735.1_ASM212473v1	28446577	CFSA166
Salmonella enterica subsp. enterica	59201	PRJNA285120	285120	Proteobacteria	Gammaproteobacteria	4.82053	52.3	-	LFCF01	89	4770	4154	12/4/15	4/6/16	Contig	California Department of Public Health	SAMN03738163	GCA_001456395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/395/GCA_001456395.1_ASM145639v1	27013038	F12M01383-2
Salmonella enterica subsp. enterica	59201	PRJNA285120	285120	Proteobacteria	Gammaproteobacteria	4.97546	51.9	-	LFCD01	42	4891	4349	12/4/15	4/6/16	Contig	California Department of Public Health	SAMN03738164	GCA_001456405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/456/405/GCA_001456405.1_ASM145640v1	27013038	F12M01377
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.89274	32.7	-	NDQQ01	71	3035	2921	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698122	GCA_002124755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/755/GCA_002124755.1_ASM212475v1	28446577	CFSA164
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.10294	39.6	-	FHGP01	40	2306	2065	2/10/16	3/13/17	Scaffold	SC	SAMEA2203927	GCA_900061135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/135/GCA_900061135.1_11657_4_37	-	2245STDY5609067
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08296	39.5	-	FHGT01	40	2272	2046	2/10/16	3/5/17	Scaffold	SC	SAMEA2203933	GCA_900061145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/145/GCA_900061145.1_11679_1_37	-	2245STDY5609073
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.87967	32.6	-	NDQP01	59	3007	2889	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698123	GCA_002124765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/765/GCA_002124765.1_ASM212476v1	28446577	CFSA165
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183851	183851	Proteobacteria	Gammaproteobacteria	4.79206	52.2	-	LRNG01	76	4476	4123	1/25/16	1/25/16	Contig	Washington State Department of Health Public Health Laboratory	SAMN02261220	GCA_001534825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/825/GCA_001534825.1_ASM153482v1	-	CFSAN001389
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183851	183851	Proteobacteria	Gammaproteobacteria	4.65896	52.2	-	LROJ01	902	4694	3785	1/25/16	1/25/16	Contig	Washington State Department of Health Public Health Laboratory	SAMN02261184	GCA_001534915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/915/GCA_001534915.1_ASM153491v1	-	CFSAN001343
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78931	32.8	-	NDQV01	72	2871	2743	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698117	GCA_002124775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/775/GCA_002124775.1_ASM212477v1	28446577	CFSA159
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.18527	39.5	-	FHHQ01	46	2415	2163	2/10/16	3/6/17	Scaffold	SC	SAMEA2203995	GCA_900061155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/155/GCA_900061155.1_11657_8_28	-	2245STDY5609136
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04458	39.7	-	FHKT01	12	2231	2011	2/10/16	3/13/17	Scaffold	SC	SAMEA2335999	GCA_900061165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/165/GCA_900061165.1_12291_4_67	-	2245STDY5699092
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.81576	32.7	-	NDQW01	71	2941	2748	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698116	GCA_002124815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/815/GCA_002124815.1_ASM212481v1	28446577	CFSA158
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183848	183848	Proteobacteria	Gammaproteobacteria	4.79866	52.1	-	LROK01	268	4698	4274	1/25/16	1/25/16	Contig	Florida Department of Health	SAMN02261183	GCA_001534925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/925/GCA_001534925.1_ASM153492v1	-	CFSAN001342
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.74024	52.2	-	LROL01	577	4715	4017	1/25/16	1/25/16	Contig	New York State Dept. of Health - Wadsworth Center	SAMN02261182	GCA_001534935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/534/935/GCA_001534935.1_ASM153493v1	-	CFSAN001341
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.71964	32.7	-	NDQY01	59	2783	2611	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698114	GCA_002124835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/835/GCA_002124835.1_ASM212483v1	28446577	CFSA156
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04582	39.7	-	FHKV01	38	2252	2028	2/10/16	3/5/17	Scaffold	SC	SAMEA2336001	GCA_900061175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/175/GCA_900061175.1_12291_4_69	-	2245STDY5699094
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.11484	39.6	-	FHLC01	42	2332	2094	2/10/16	3/13/17	Scaffold	SC	SAMEA2336013	GCA_900061185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/185/GCA_900061185.1_12291_4_81	-	2245STDY5699106
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.80929	32.6	-	NDQZ01	64	2928	2783	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698113	GCA_002124855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/855/GCA_002124855.1_ASM212485v1	28446577	CFSA155
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.77305	52.1	-	LROH01	220	4639	4243	1/25/16	1/25/16	Contig	New York State Dept. of Health - Wadsworth Center	SAMN02261186	GCA_001535005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/005/GCA_001535005.1_ASM153500v1	-	CFSAN001346
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183848	183848	Proteobacteria	Gammaproteobacteria	4.75431	52.1	-	LROG01	472	4753	4057	1/25/16	1/25/16	Contig	Florida Department of Health	SAMN02261187	GCA_001535015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/015/GCA_001535015.1_ASM153501v1	-	CFSAN001347
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.71827	32.8	-	NDRC01	27	2785	2631	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698110	GCA_002124865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/865/GCA_002124865.1_ASM212486v1	28446577	CFSA152
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04509	39.8	-	FHLK01	26	2252	2023	2/10/16	3/13/17	Scaffold	SC	SAMEA2336023	GCA_900061195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/195/GCA_900061195.1_12291_5_1	-	2245STDY5699116
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.1191	39.6	-	FHLT01	62	2326	2080	2/10/16	3/13/17	Scaffold	SC	SAMEA2336068	GCA_900061205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/205/GCA_900061205.1_12291_5_46	-	2245STDY5699163
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.84196	32.6	-	NDRD01	141	2957	2824	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698109	GCA_002124895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/895/GCA_002124895.1_ASM212489v1	28446577	CFSA151
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.78219	52.1	-	LROE01	235	4712	4252	1/25/16	1/25/16	Contig	New York State Dept. of Health - Wadsworth Center	SAMN02261190	GCA_001535065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/065/GCA_001535065.1_ASM153506v1	-	CFSAN001350
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	4.67746	52.2	-	LRNW01	903	4773	3970	1/25/16	1/25/16	Contig	New York State Dept. of Health - Wadsworth Center	SAMN02261210	GCA_001535215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/215/GCA_001535215.1_ASM153521v1	-	CFSAN001379
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.81116	32.8	-	NDRE01	48	2893	2777	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698108	GCA_002124905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/905/GCA_002124905.1_ASM212490v1	28446577	CFSA150
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04256	39.7	-	FHMP01	28	2226	2017	2/10/16	3/12/17	Scaffold	SC	SAMEA2467562	GCA_900061215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/215/GCA_900061215.1_13154_3_20	-	2245STDY5804463
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.14623	39.8	-	FHNR01	302	2348	2037	2/10/16	3/13/17	Scaffold	SC	SAMEA2467732	GCA_900061225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/225/GCA_900061225.1_13154_3_53	-	2245STDY5804501
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.80647	32.7	-	NDRQ01	70	2917	2724	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698096	GCA_002124935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/935/GCA_002124935.1_ASM212493v1	28446577	CFSA138
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183847	183847	Proteobacteria	Gammaproteobacteria	4.79058	52.2	-	LRNF01	58	4467	4148	1/25/16	1/25/16	Contig	 Arizona State Public Health Laboratory	SAMN02261221	GCA_001535245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/245/GCA_001535245.1_ASM153524v1	-	CFSAN001390
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183847	183847	Proteobacteria	Gammaproteobacteria	4.75702	52.1	-	LRNT01	500	4790	4133	1/25/16	1/25/16	Contig	 Arizona State Public Health Laboratory	SAMN02261217	GCA_001535305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/305/GCA_001535305.1_ASM153530v1	-	CFSAN001386
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.87764	32.6	-	NDRI01	59	3005	2887	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698104	GCA_002124945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/945/GCA_002124945.1_ASM212494v1	28446577	CFSA146
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.05713	39.7	-	FHPP01	21	2264	2028	2/10/16	3/13/17	Scaffold	SC	SAMEA2521537	GCA_900061235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/235/GCA_900061235.1_13414_1_81	-	2245STDY5819502
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06032	39.6	-	FHUJ01	21	2274	2029	2/10/16	3/13/17	Scaffold	SC	SAMEA2796495	GCA_900061245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/245/GCA_900061245.1_14673_1_87	-	2245STDY5982516
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.76548	32.8	-	NDRR01	64	2818	2664	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698095	GCA_002124975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/975/GCA_002124975.1_ASM212497v1	28446577	CFSA137
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183848	183848	Proteobacteria	Gammaproteobacteria	4.88831	52.1	-	LRNR01	323	4690	4094	1/25/16	1/25/16	Contig	Florida Department of Health	SAMN02261219	GCA_001535335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/535/335/GCA_001535335.1_ASM153533v1	-	CFSAN001388
Salmonella enterica	28901	PRJNA316063	316063	Proteobacteria	Gammaproteobacteria	3.35447	51.5	-	LVKR01	3068	2806	1635	3/26/16	3/26/16	Contig	Christian Medical College	SAMN04574665	GCA_001597995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/597/995/GCA_001597995.1_ASM159799v1	-	VB1932
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.75682	32.8	-	NDSC01	61	2836	2686	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698084	GCA_002124985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/124/985/GCA_002124985.1_ASM212498v1	28446577	CFSA113
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.13545	39.4	-	FHUK01	36	2321	2078	2/10/16	3/13/17	Scaffold	SC	SAMEA2796496	GCA_900061255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/255/GCA_900061255.1_14673_1_88	-	2245STDY5982517
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07527	39.6	-	FHXZ01	32	2278	2028	2/10/16	3/6/17	Scaffold	SC	SAMEA2150976	GCA_900061285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/285/GCA_900061285.1_10678_6_57	-	2690STDY5561854
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.91401	32.6	-	NDSD01	62	3049	2928	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698083	GCA_002125015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/015/GCA_002125015.1_ASM212501v1	28446577	CFSA112
Salmonella enterica subsp. enterica serovar Tennessee	143221	PRJNA183851	183851	Proteobacteria	Gammaproteobacteria	4.77144	52.1	-	LXGV01	232	4685	4220	5/4/16	5/4/16	Contig	Washington State Department of Health Public Health Laboratory	SAMN02261188	GCA_001637065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/637/065/GCA_001637065.1_ASM163706v1	-	CFSAN001348
Salmonella enterica subsp. enterica serovar Agona str. 400095 22	1072597	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.65168	52	-	LXTN01	750	4751	3885	5/21/16	5/21/16	Contig	Center for Food Safety and Applied Nutrition	SAMN01816153	GCA_001649445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/649/445/GCA_001649445.1_ASM164944v1	-	400095 22
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.81672	32.8	-	NDSF01	141	2941	2757	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698081	GCA_002125025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/025/GCA_002125025.1_ASM212502v1	28446577	CFSA110
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07704	39.6	-	FIDC01	32	2275	2028	2/10/16	3/13/17	Scaffold	SC	SAMEA2150838	GCA_900061305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/305/GCA_900061305.1_10702_5_38	-	2690STDY5561759
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99019	39.8	-	FHHF01	50	2186	1932	2/10/16	3/13/17	Scaffold	SC	SAMEA2203948	GCA_900061745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/745/GCA_900061745.1_11658_2_64	-	2245STDY5609089
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.92542	32.7	-	NDSG01	63	3079	2964	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698080	GCA_002125045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/045/GCA_002125045.1_ASM212504v1	28446577	CFSA109
Salmonella enterica subsp. enterica serovar Agona str. 400096 16	1072598	PRJNA186035	186035	Proteobacteria	Gammaproteobacteria	4.72504	52.1	-	LYVG01	284	4668	4185	6/1/16	6/1/16	Contig	Center for Food Safety and Applied Nutrition	SAMN01816154	GCA_001653995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/653/995/GCA_001653995.1_CFSAN000459_01.0	-	400096 16
Salmonella enterica subsp. enterica serovar Typhi	90370	PRJNA320983	320983	Proteobacteria	Gammaproteobacteria	4.77145	52	-	LXWB01	117	4706	4156	6/21/16	6/21/16	Contig	Christian Medical College	SAMN04961662	GCA_001674975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/674/975/GCA_001674975.1_ASM167497v1	-	VB7766
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.89281	32.7	-	NDSH01	129	3054	2931	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698079	GCA_002125075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/075/GCA_002125075.1_ASM212507v1	28446577	CFSA108
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04469	39.8	-	FHHI01	169	2239	1969	2/10/16	3/13/17	Scaffold	SC	SAMEA2203951	GCA_900061755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/755/GCA_900061755.1_11679_1_42	-	2245STDY5609092
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.15067	39.6	-	FHJY01	202	2336	2082	2/10/16	3/12/17	Scaffold	SC	SAMEA2335977	GCA_900061765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/765/GCA_900061765.1_12291_4_45	-	2245STDY5699070
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.80247	32.8	-	NDSJ01	78	2878	2763	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698077	GCA_002125095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/095/GCA_002125095.1_ASM212509v1	28446577	CFSA106
Salmonella enterica subsp. enterica serovar Javiana	363569	PRJNA344415	344415	Proteobacteria	Gammaproteobacteria	5.55132	55.7	-	MKMB01	2039	4864	4586	1/6/17	1/6/17	Contig	University of Florida	SAMN03290544	GCA_001938805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/938/805/GCA_001938805.1_ASM193880v1	-	FLDOH-99
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA362740	362740	Proteobacteria	Gammaproteobacteria	4.85637	51.8	-	MUAF01	302	5153	4393	2/1/17	2/1/17	Contig	University of Sao Paulo	SAMN06246911	GCA_001981435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/981/435/GCA_001981435.1_ASM198143v1	-	SAL58370
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.74236	32.8	-	NDSI01	48	2807	2680	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698078	GCA_002125105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/105/GCA_002125105.1_ASM212510v1	28446577	CFSA107
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08771	39.6	-	FHJZ01	42	2280	2066	2/10/16	3/13/17	Scaffold	SC	SAMEA2335978	GCA_900061775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/775/GCA_900061775.1_12291_4_46	-	2245STDY5699071
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0798	39.5	-	FHKC01	59	2284	2057	2/10/16	3/13/17	Scaffold	SC	SAMEA2335981	GCA_900061785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/785/GCA_900061785.1_12838_1_71	-	2245STDY5699074
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78996	32.8	-	NDSQ01	69	2878	2760	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698070	GCA_002125115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/115/GCA_002125115.1_ASM212511v1	28446577	CFSA097
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.81523	51.7	-	MXDQ01	4337	-	-	3/17/17	3/17/17	Contig	University of California at Davis	SAMN02368514	GCA_002030085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/085/GCA_002030085.1_ASM203008v1	-	BCW_2434
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.96901	52.1	-	MXET01	1948	-	-	3/17/17	3/17/17	Contig	University of California at Davis	SAMN02368019	GCA_002030375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/375/GCA_002030375.1_ASM203037v1	-	BCW_2215
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.92756	32.7	-	NDSW01	81	3089	2967	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698064	GCA_002125175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/175/GCA_002125175.1_ASM212517v1	28446577	CFSA091
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04205	39.8	-	FHLS01	46	2249	2023	2/10/16	3/6/17	Scaffold	SC	SAMEA2336067	GCA_900061795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/795/GCA_900061795.1_12291_5_45	-	2245STDY5699162
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.10135	39.7	-	FHOC01	35	2314	2076	2/10/16	3/5/17	Scaffold	SC	SAMEA2467753	GCA_900061805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/805/GCA_900061805.1_13154_3_74	-	2245STDY5804522
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78777	32.8	-	NDTD01	60	2874	2741	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698057	GCA_002125185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/185/GCA_002125185.1_ASM212518v1	28446577	CFSA084
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.52867	51.6	-	MXEC01	790	-	-	3/17/17	3/17/17	Contig	University of California at Davis	SAMN02368045	GCA_002030805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/030/805/GCA_002030805.1_ASM203080v1	-	BCW_2246
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.08985	51.4	-	MXFR01	7229	-	-	3/17/17	3/17/17	Contig	University of California at Davis	SAMN02367987	GCA_002031075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/075/GCA_002031075.1_ASM203107v1	-	N30703
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.83138	32.8	-	NDSV01	98	2943	2813	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698065	GCA_002125215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/215/GCA_002125215.1_ASM212521v1	28446577	CFSA092
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.07593	39.6	-	FHPQ01	20	2314	2077	2/10/16	3/13/17	Scaffold	SC	SAMEA2521538	GCA_900061815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/815/GCA_900061815.1_13414_1_82	-	2245STDY5819503
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0562	39.6	-	FHQS01	32	2242	2019	2/10/16	3/6/17	Scaffold	SC	SAMEA2521575	GCA_900061825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/825/GCA_900061825.1_13414_2_24	-	2245STDY5819541
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.8759	32.6	-	NDTE01	87	3013	2878	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698056	GCA_002125235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/235/GCA_002125235.1_ASM212523v1	28446577	CFSA083
Salmonella enterica subsp. enterica serovar Saintpaul	90105	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.92436	51.9	-	MXGW01	1637	-	-	3/17/17	3/17/17	Contig	University of California at Davis	SAMN02367937	GCA_002031555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/555/GCA_002031555.1_ASM203155v1	-	BCW_2129
"Salmonella enterica subsp. arizonae serovar 18:z4,z23:-"	1192839	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.24458	51.3	-	MXHH01	4412	-	-	3/17/17	3/17/17	Contig	University of California at Davis	SAMN02367913	GCA_002031665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/665/GCA_002031665.1_ASM203166v1	-	N26928
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.85873	32.6	-	NDTG01	79	3001	2877	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698054	GCA_002125255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/255/GCA_002125255.1_ASM212525v1	28446577	CFSA081
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06257	39.6	-	FHRG01	21	2255	2038	2/10/16	3/5/17	Scaffold	SC	SAMEA2521594	GCA_900061835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/835/GCA_900061835.1_13414_2_43	-	2245STDY5819560
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04928	39.6	-	FHSI01	14	2264	2031	2/10/16	3/13/17	Scaffold	SC	SAMEA2521625	GCA_900061845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/845/GCA_900061845.1_13414_2_74	-	2245STDY5819591
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.76334	32.8	-	NDTF01	74	2812	2684	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698055	GCA_002125275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/275/GCA_002125275.1_ASM212527v1	28446577	CFSA082
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.12437	51.9	-	MXHI01	1876	-	-	3/17/17	3/17/17	Contig	University of California at Davis	SAMN02367911	GCA_002031675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/675/GCA_002031675.1_ASM203167v1	-	BCW_2101
Salmonella enterica subsp. enterica serovar Muenster	82689	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.25748	51.8	-	MXHJ01	6009	-	-	3/17/17	3/17/17	Contig	University of California at Davis	SAMN02367910	GCA_002031685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/031/685/GCA_002031685.1_ASM203168v1	-	N26663
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.77156	32.8	-	NDTI01	44	2868	2746	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698052	GCA_002125285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/285/GCA_002125285.1_ASM212528v1	28446577	CFSA079
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.03923	39.6	-	FHVL01	16	2242	2010	2/10/16	3/13/17	Scaffold	SC	SAMEA2796724	GCA_900061855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/855/GCA_900061855.1_14673_4_31	-	2245STDY5982750
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.10869	39.7	-	FIVE01	85	2353	2117	2/10/16	3/13/17	Scaffold	SC	SAMEA867781	GCA_900061915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/915/GCA_900061915.1_5390_6_5	-	A33973
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.8284	32.8	-	NDTJ01	51	2959	2810	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698051	GCA_002125315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/315/GCA_002125315.1_ASM212531v1	28446577	CFSA078
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.06632	51.9	-	MXHA01	3352	-	-	3/17/17	3/17/17	Contig	University of California at Davis	SAMN02367930	GCA_002032775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/775/GCA_002032775.1_ASM203277v1	-	BCW_2122
Salmonella enterica subsp. enterica serovar Derby	28144	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.79128	52	-	MXHK01	2141	-	-	3/17/17	3/17/17	Contig	University of California at Davis	SAMN02367909	GCA_002032835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/835/GCA_002032835.1_ASM203283v1	-	BCW_2099
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.73975	32.7	-	NDTN01	51	2821	2673	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698047	GCA_002125325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/325/GCA_002125325.1_ASM212532v1	28446577	CFSA074
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.05945	39.8	-	FIVL01	98	2295	2024	2/10/16	3/13/17	Scaffold	SC	SAMEA867923	GCA_900061925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/925/GCA_900061925.1_3850_2_7	-	C16000X
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.1048	39.5	-	FHMM01	60	2283	2032	2/10/16	3/13/17	Scaffold	SC	SAMEA2467558	GCA_900061955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/955/GCA_900061955.1_13154_3_16	-	2245STDY5804459
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.77354	32.7	-	NDTQ01	71	2844	2659	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698044	GCA_002125355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/355/GCA_002125355.1_ASM212535v1	28446577	CFSA071
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.79584	51.9	-	MXIC01	4489	-	-	3/17/17	3/17/17	Contig	University of California at Davis	SAMN02367880	GCA_002032965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/965/GCA_002032965.1_ASM203296v1	-	BCW_2069
Salmonella enterica subsp. enterica serovar Typhimurium var. 5-	1620419	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.87944	51.8	-	MXHU01	5883	-	-	3/17/17	3/17/17	Contig	University of California at Davis	SAMN02367894	GCA_002032985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/032/985/GCA_002032985.1_ASM203298v1	-	BCW_2084
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.84666	32.7	-	NDTO01	31	3004	2841	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698046	GCA_002125365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/365/GCA_002125365.1_ASM212536v1	28446577	CFSA073
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.07513	39.6	-	FHNZ01	58	2288	2028	2/10/16	3/13/17	Scaffold	SC	SAMEA2467749	GCA_900061965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/965/GCA_900061965.1_13154_3_70	-	2245STDY5804518
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99307	39.8	-	FHFQ01	49	2201	1938	2/10/16	3/13/17	Scaffold	SC	SAMEA2203894	GCA_900061995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/995/GCA_900061995.1_11511_8_39	-	2245STDY5609034
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.8337	32.6	-	NDTX01	50	2950	2828	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698037	GCA_002125395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/395/GCA_002125395.1_ASM212539v1	28446577	CFSA050
Salmonella enterica subsp. enterica serovar Kentucky	192955	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.99187	51.6	-	MXID01	5689	-	-	3/17/17	3/17/17	Contig	University of California at Davis	SAMN02367879	GCA_002033025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/033/025/GCA_002033025.1_ASM203302v1	-	BCW_2068
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.555	51.3	-	MXMT01	115	-	-	3/17/17	3/17/17	Contig	University of California at Davis	SAMN03356964	GCA_002034325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/325/GCA_002034325.1_ASM203432v1	-	BCW_1600
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.74883	32.7	-	NDTY01	65	2834	2734	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698036	GCA_002125405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/405/GCA_002125405.1_ASM212540v1	28446577	CFSA049
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.07964	39.6	-	FHNQ01	25	2269	2032	2/10/16	3/15/17	Scaffold	SC	SAMEA2467734	GCA_900062005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/005/GCA_900062005.1_13154_3_55	-	2245STDY5804503
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.10925	39.5	-	FHUH01	65	2296	2036	2/10/16	3/6/17	Scaffold	SC	SAMEA2796491	GCA_900062015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/015/GCA_900062015.1_14673_1_83	-	2245STDY5982512
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.75427	32.7	-	NDUA01	55	2838	2698	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698034	GCA_002125435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/435/GCA_002125435.1_ASM212543v1	28446577	CFSA047
"Salmonella enterica subsp. salamae serovar 30:1,z28:z6"	1967615	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.90838	51.9	-	MXLJ01	3347	-	-	3/17/17	3/17/17	Contig	University of California at Davis	SAMN02367799	GCA_002034585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/034/585/GCA_002034585.1_ASM203458v1	-	175-85
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.28335	51.5	-	MYUW01	8708	-	-	3/20/17	3/20/17	Contig	University of California at Davis	SAMN03360110	GCA_002043305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/305/GCA_002043305.1_ASM204330v1	-	BCW_6307
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.72568	32.7	-	NDTZ01	51	2791	2661	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698035	GCA_002125445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/445/GCA_002125445.1_ASM212544v1	28446577	CFSA048
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06577	39.6	-	FHVP01	44	2240	2026	2/10/16	3/5/17	Scaffold	SC	SAMEA2796727	GCA_900062025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/025/GCA_900062025.1_14673_4_34	-	2245STDY5982753
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.17229	39.6	-	FHJR01	65	2405	2156	2/10/16	3/13/17	Scaffold	SC	SAMEA2335967	GCA_900062155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/155/GCA_900062155.1_12291_4_35	-	2245STDY5699060
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78862	32.8	-	NDUC01	45	2887	2726	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698032	GCA_002125465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/465/GCA_002125465.1_ASM212546v1	28446577	CFSA045
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.19143	51.8	-	MYUX01	9136	-	-	3/20/17	3/20/17	Contig	University of California at Davis	SAMN03360109	GCA_002043325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/325/GCA_002043325.1_ASM204332v1	-	BCW_6306
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.46833	51.4	-	MYVD01	7062	-	-	3/20/17	3/20/17	Contig	University of California at Davis	SAMN03360101	GCA_002043405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/405/GCA_002043405.1_ASM204340v1	-	BCW_6298
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.87912	32.7	-	NDUD01	63	3005	2853	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698031	GCA_002125485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/485/GCA_002125485.1_ASM212548v1	28446577	CFSA044
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08433	39.5	-	FHLU01	32	2275	2038	2/10/16	3/13/17	Scaffold	SC	SAMEA2336069	GCA_900062165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/165/GCA_900062165.1_12291_5_47	-	2245STDY5699164
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08743	39.6	-	FHOW01	32	2321	2066	2/10/16	3/13/17	Scaffold	SC	SAMEA2521501	GCA_900062175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/175/GCA_900062175.1_13414_1_48	-	2245STDY5819469
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.79006	32.8	-	NDUF01	81	2861	2755	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698028	GCA_002125515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/515/GCA_002125515.1_ASM212551v1	28446577	CFSA041
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.27399	51.7	-	MYVO01	8069	-	-	3/20/17	3/20/17	Contig	University of California at Davis	SAMN03360089	GCA_002043525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/525/GCA_002043525.1_ASM204352v1	-	BCW_6286
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.64902	52	-	MYVC01	2808	-	-	3/20/17	3/20/17	Contig	University of California at Davis	SAMN03360102	GCA_002043555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/555/GCA_002043555.1_ASM204355v1	-	BCW_6299
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.92625	32.7	-	NDUG01	67	3083	2959	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698027	GCA_002125525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/525/GCA_002125525.1_ASM212552v1	28446577	CFSA040
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08923	39.5	-	FHJW01	93	2278	2049	2/10/16	3/13/17	Scaffold	SC	SAMEA2335974	GCA_900062915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/915/GCA_900062915.1_12838_1_70	-	2245STDY5699067
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.05122	39.6	-	FHKB01	33	2238	1995	2/10/16	3/13/17	Scaffold	SC	SAMEA2335980	GCA_900062925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/925/GCA_900062925.1_12291_4_48	-	2245STDY5699073
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78713	32.8	-	NDUJ01	49	2893	2758	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698024	GCA_002125555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/555/GCA_002125555.1_ASM212555v1	28446577	CFSA037
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.14531	52	-	MYVV01	2330	-	-	3/20/17	3/20/17	Contig	University of California at Davis	SAMN03360082	GCA_002043625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/625/GCA_002043625.1_ASM204362v1	-	BCW_6279
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.96943	52	-	MYVZ01	4665	-	-	3/20/17	3/20/17	Contig	University of California at Davis	SAMN03360078	GCA_002043705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/705/GCA_002043705.1_ASM204370v1	-	BCW_6275
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.92462	32.6	-	NDUL01	58	3079	2952	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698022	GCA_002125565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/565/GCA_002125565.1_ASM212556v1	28446577	CFSA035
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.00943	39.6	-	FHPR01	45	2230	1999	2/10/16	3/13/17	Scaffold	SC	SAMEA2521539	GCA_900062935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/935/GCA_900062935.1_13414_1_83	-	2245STDY5819504
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0437	39.6	-	FHSX01	37	2257	2011	2/10/16	3/6/17	Scaffold	SC	SAMEA2521646	GCA_900062945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/945/GCA_900062945.1_13414_2_95	-	2245STDY5819612
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.87543	32.7	-	NDUM01	80	2973	2862	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698021	GCA_002125595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/595/GCA_002125595.1_ASM212559v1	28446577	CFSA034
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.70322	51.8	-	MYUY01	5717	-	-	3/20/17	3/20/17	Contig	University of California at Davis	SAMN03360106	GCA_002043985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/043/985/GCA_002043985.1_ASM204398v1	-	BCW_6303
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.99796	51.7	-	MYVL01	5589	-	-	3/20/17	3/20/17	Contig	University of California at Davis	SAMN03360092	GCA_002044145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/145/GCA_002044145.1_ASM204414v1	-	BCW_6289
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.82762	32.8	-	NDUN01	94	2948	2809	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698020	GCA_002125605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/605/GCA_002125605.1_ASM212560v1	28446577	CFSA033
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.1824	39.5	-	FHGR01	217	2385	2094	2/10/16	3/13/17	Scaffold	SC	SAMEA2203930	GCA_900063155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/155/GCA_900063155.1_11657_4_39	-	2245STDY5609070
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06215	39.6	-	FHNY01	27	2281	2041	2/10/16	3/13/17	Scaffold	SC	SAMEA2467743	GCA_900063165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/165/GCA_900063165.1_13154_3_64	-	2245STDY5804512
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.76303	32.8	-	NDUO01	109	2821	2690	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698019	GCA_002125635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/635/GCA_002125635.1_ASM212563v1	28446577	CFSA032
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.47062	51.8	-	MYVQ01	1113	-	-	3/20/17	3/20/17	Contig	University of California at Davis	SAMN03360087	GCA_002044175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/175/GCA_002044175.1_ASM204417v1	-	BCW_6284
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.87005	52	-	MYXE01	2618	-	-	3/20/17	3/20/17	Contig	University of California at Davis	SAMN03360044	GCA_002044545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/545/GCA_002044545.1_ASM204454v1	-	BCW_6240
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.88789	32.7	-	NDUQ01	128	3027	2871	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698017	GCA_002125645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/645/GCA_002125645.1_ASM212564v1	28446577	CFSA030
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.97269	39.8	-	FHSK01	32	2190	1963	2/10/16	3/5/17	Scaffold	SC	SAMEA2521627	GCA_900063175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/175/GCA_900063175.1_13414_2_76	-	2245STDY5819593
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.14543	39.5	-	FHTI01	66	2339	2084	2/10/16	3/6/17	Scaffold	SC	SAMEA2521667	GCA_900063185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/185/GCA_900063185.1_13414_3_21	-	2245STDY5819634
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.88078	32.6	-	NDUR01	114	3023	2883	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698016	GCA_002125655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/655/GCA_002125655.1_ASM212565v1	28446577	CFSA029
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.4804	51.8	-	MYXO01	591	-	-	3/20/17	3/20/17	Contig	University of California at Davis	SAMN03360032	GCA_002044655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/044/655/GCA_002044655.1_ASM204465v1	-	BCW_6228
Salmonella enterica subsp. enterica serovar Agbeni	1967642	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.54688	52.1	-	MZCB01	1740	-	-	3/20/17	3/20/17	Contig	University of California at Davis	SAMN03264973	GCA_002048165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/165/GCA_002048165.1_ASM204816v1	-	2011K-0804
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.7876	32.8	-	NDUV01	88	2866	2739	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698012	GCA_002125695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/695/GCA_002125695.1_ASM212569v1	28446577	CFSA025
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.03954	39.6	-	FHTH01	30	2249	2020	2/10/16	3/13/17	Scaffold	SC	SAMEA2521668	GCA_900063195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/195/GCA_900063195.1_13414_3_22	-	2245STDY5819635
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0541	39.6	-	FHVX01	14	2265	2035	2/10/16	3/8/17	Scaffold	SC	SAMEA2796734	GCA_900063205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/205/GCA_900063205.1_14673_4_41	-	2245STDY5982760
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.88458	32.6	-	NDUW01	94	3015	2880	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698011	GCA_002125715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/715/GCA_002125715.1_ASM212571v1	28446577	CFSA024
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.5855	51.7	-	MZFG01	2177	-	-	3/20/17	3/20/17	Contig	University of California at Davis	SAMN03359813	GCA_002048785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/785/GCA_002048785.1_ASM204878v1	-	BCW_5990
Salmonella enterica subsp. enterica serovar Blockley	57741	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.57584	51.9	-	MZFV01	249	-	-	3/20/17	3/20/17	Contig	University of California at Davis	SAMN03265068	GCA_002048955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/048/955/GCA_002048955.1_ASM204895v1	-	06-0637
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.87828	32.6	-	NDUX01	72	3005	2873	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698010	GCA_002125725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/725/GCA_002125725.1_ASM212572v1	28446577	CFSA023
Streptococcus pneumoniae	1313	PRJEB4477	230313	Terrabacteria group	Firmicutes	2.07485	39.6	-	FHXK01	34	2286	2032	2/10/16	3/13/17	Scaffold	SC	SAMEA2147470	GCA_900063215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/215/GCA_900063215.1_10678_6_41	-	2690STDY5561846
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.1803	39.6	-	FHFT01	249	2393	2114	2/10/16	3/13/17	Scaffold	SC	SAMEA2203895	GCA_900063355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/355/GCA_900063355.1_11657_8_18	-	2245STDY5609035
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.80284	32.8	-	NDUZ01	78	2891	2766	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698008	GCA_002125755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/755/GCA_002125755.1_ASM212575v1	28446577	CFSA021
Salmonella enterica subsp. enterica serovar Weltevreden	57743	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.47506	51.8	-	MZGE01	1751	-	-	3/20/17	3/20/17	Contig	University of California at Davis	SAMN03265086	GCA_002049075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/075/GCA_002049075.1_ASM204907v1	-	54-5182
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.25472	51.8	-	MYVB01	4519	-	-	3/20/17	3/20/17	Contig	University of California at Davis	SAMN03360103	GCA_002049405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/049/405/GCA_002049405.1_ASM204940v1	-	BCW_6300
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.8829	32.6	-	NDVA01	94	3017	2888	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698007	GCA_002125765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/765/GCA_002125765.1_ASM212576v1	28446577	CFSA020
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99028	39.8	-	FHII01	49	2189	1935	2/10/16	3/13/17	Scaffold	SC	SAMEA2204017	GCA_900063365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/365/GCA_900063365.1_11511_8_55	-	2245STDY5609158
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.10385	39.6	-	FHIK01	26	2315	2085	2/10/16	3/5/17	Scaffold	SC	SAMEA2204018	GCA_900063375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/375/GCA_900063375.1_11511_8_56	-	2245STDY5609159
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.87666	32.6	-	NDVB01	69	3007	2884	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698006	GCA_002125795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/795/GCA_002125795.1_ASM212579v1	28446577	CFSA019
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.33736	51.8	-	MYGC01	2240	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03359775	GCA_002050575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/575/GCA_002050575.1_ASM205057v1	-	BCW_5948
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.28984	51.8	-	MYGK01	2102	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03359763	GCA_002050985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/050/985/GCA_002050985.1_ASM205098v1	-	BCW_5936
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.82646	32.8	-	NDVC01	71	2936	2808	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698005	GCA_002125805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/805/GCA_002125805.1_ASM212580v1	28446577	CFSA018
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.98779	39.8	-	FHIM01	45	2184	1925	2/10/16	3/13/17	Scaffold	SC	SAMEA2204021	GCA_900063385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/385/GCA_900063385.1_11657_4_56	-	2245STDY5609162
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.05019	39.8	-	FHIW01	36	2243	2020	2/10/16	3/13/17	Scaffold	SC	SAMEA2335945	GCA_900063395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/395/GCA_900063395.1_12291_4_13	-	2245STDY5699038
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78382	32.8	-	NDVE01	76	2860	2753	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698003	GCA_002125835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/835/GCA_002125835.1_ASM212583v1	28446577	CFSA016
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.78473	52	-	MYHS01	4043	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03359721	GCA_002051535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/535/GCA_002051535.1_ASM205153v1	-	BCW_5878
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.26381	51.3	-	MYHC01	8211	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03359737	GCA_002051615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/615/GCA_002051615.1_ASM205161v1	-	BCW_5894
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78982	32.8	-	NDVD01	84	2870	2749	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698004	GCA_002125845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/845/GCA_002125845.1_ASM212584v1	28446577	CFSA017
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0448	39.8	-	FHKU01	40	2258	2019	2/10/16	3/13/17	Scaffold	SC	SAMEA2335998	GCA_900063405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/405/GCA_900063405.1_12291_4_66	-	2245STDY5699091
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06089	39.6	-	FHKS01	18	2271	2032	2/10/16	3/12/17	Scaffold	SC	SAMEA2336000	GCA_900063415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/415/GCA_900063415.1_12291_4_68	-	2245STDY5699093
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.85928	32.7	-	NDVF01	95	2994	2839	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698002	GCA_002125875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/875/GCA_002125875.1_ASM212587v1	28446577	CFSA015
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.78289	51.9	-	MYHX01	4576	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03359715	GCA_002051695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/695/GCA_002051695.1_ASM205169v1	-	BCW_5872
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.67951	51.2	-	MYIB01	7825	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03359711	GCA_002051765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/765/GCA_002051765.1_ASM205176v1	-	BCW_5867
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.73877	32.8	-	NDVG01	45	2802	2674	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698001	GCA_002125885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/885/GCA_002125885.1_ASM212588v1	28446577	CFSA014
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04692	39.8	-	FHKW01	35	2256	2021	2/10/16	3/5/17	Scaffold	SC	SAMEA2336006	GCA_900063425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/425/GCA_900063425.1_12291_4_74	-	2245STDY5699099
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04945	39.8	-	FHML01	45	2261	2037	2/10/16	3/13/17	Scaffold	SC	SAMEA2467556	GCA_900063435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/435/GCA_900063435.1_13154_3_14	-	2245STDY5804457
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.75026	32.7	-	NDVI01	53	2839	2692	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697999	GCA_002125915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/915/GCA_002125915.1_ASM212591v1	28446577	CFSA012
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.89906	52	-	MYID01	3569	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03359708	GCA_002051795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/795/GCA_002051795.1_ASM205179v1	-	BCW_5864
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.67362	51.8	-	MYIF01	2103	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03359705	GCA_002051805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/805/GCA_002051805.1_ASM205180v1	-	BCW_5861
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.92793	32.7	-	NDVK01	76	3085	2964	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697997	GCA_002125955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/955/GCA_002125955.1_ASM212595v1	28446577	CFSA010
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08197	39.6	-	FHNO01	28	2306	2052	2/10/16	3/6/17	Scaffold	SC	SAMEA2467731	GCA_900063445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/445/GCA_900063445.1_13154_3_52	-	2245STDY5804500
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06159	39.5	-	FHRX01	46	2286	2035	2/10/16	3/13/17	Scaffold	SC	SAMEA2521613	GCA_900063455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/455/GCA_900063455.1_13414_2_62	-	2245STDY5819579
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.9246	32.7	-	NDVM01	89	3085	2962	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697995	GCA_002125975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/975/GCA_002125975.1_ASM212597v1	28446577	CFSA008
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.95047	52.1	-	MYIO01	2631	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03359696	GCA_002051925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/925/GCA_002051925.1_ASM205192v1	-	BCW_5852
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.96748	51.9	-	MYIR01	4002	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03359693	GCA_002051955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/051/955/GCA_002051955.1_ASM205195v1	-	BCW_5849
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78889	32.7	-	NDVO01	57	2899	2754	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697993	GCA_002125985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/125/985/GCA_002125985.1_ASM212598v1	28446577	CFSA006
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0463	39.8	-	FHRY01	35	2256	2016	2/10/16	3/13/17	Scaffold	SC	SAMEA2521614	GCA_900063465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/465/GCA_900063465.1_13414_2_63	-	2245STDY5819580
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.23695	39.4	-	FHSY01	224	2453	2163	2/10/16	3/12/17	Scaffold	SC	SAMEA2521650	GCA_900063475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/475/GCA_900063475.1_13414_3_4	-	2245STDY5819617
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.77228	32.8	-	NDVS01	70	2859	2736	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697989	GCA_002126015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/015/GCA_002126015.1_ASM212601v1	28446577	CFSA001
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.98646	52.1	-	MYIU01	2712	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03359690	GCA_002052015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/015/GCA_002052015.1_ASM205201v1	-	BCW_5846
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.50816	51.9	-	MYJE01	1987	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03359680	GCA_002052195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/195/GCA_002052195.1_ASM205219v1	-	BCW_5836
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.87832	32.6	-	NDVV01	291	3019	2877	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697986	GCA_002126035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/035/GCA_002126035.1_ASM212603v1	28446577	c59
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.1184	39.6	-	FHSZ01	45	2370	2109	2/10/16	3/13/17	Scaffold	SC	SAMEA2521651	GCA_900063485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/485/GCA_900063485.1_13414_3_5	-	2245STDY5819618
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.07801	39.7	-	FIVM01	62	2305	2065	2/10/16	3/13/17	Scaffold	SC	SAMEA867783	GCA_900063675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/675/GCA_900063675.1_5390_6_7	-	A34045
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.85798	32.6	-	NDVU01	64	2975	2855	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697987	GCA_002126045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/045/GCA_002126045.1_ASM212604v1	28446577	c60
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.87458	52.1	-	MYJJ01	2886	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03359675	GCA_002052285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/285/GCA_002052285.1_ASM205228v1	-	BCW_5831
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.62947	51.9	-	MYJQ01	3656	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03359668	GCA_002052365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/365/GCA_002052365.1_ASM205236v1	-	BCW_5824
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.88479	32.6	-	NDVX01	130	3022	2891	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697984	GCA_002126075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/075/GCA_002126075.1_ASM212607v1	28446577	c57
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.11253	39.6	-	FIUE01	62	2360	2093	2/10/16	3/6/17	Scaffold	SC	SAMEA867948	GCA_900063685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/685/GCA_900063685.1_4564_2_8	-	C11020
Streptococcus pneumoniae	1313	PRJEB2102	203746	Terrabacteria group	Firmicutes	2.09816	39.6	-	FIVK01	61	2335	2076	2/10/16	3/13/17	Scaffold	SC	SAMEA1012549	GCA_900063695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/695/GCA_900063695.1_4880_1_4	-	D28572
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.76799	32.7	-	NDVY01	103	2833	2726	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697983	GCA_002126095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/095/GCA_002126095.1_ASM212609v1	28446577	c56
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.57559	52.2	-	MYJX01	1618	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358604	GCA_002052455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/455/GCA_002052455.1_ASM205245v1	-	BCW_5232
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.65057	52	-	MYJY01	4925	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358603	GCA_002052475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/475/GCA_002052475.1_ASM205247v1	-	BCW_5231
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.88173	32.6	-	NDVZ01	79	3009	2891	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697982	GCA_002126105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/105/GCA_002126105.1_ASM212610v1	28446577	c55
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.10127	39.6	-	FIVW01	96	2305	2042	2/10/16	3/13/17	Scaffold	SC	SAMEA867777	GCA_900063725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/725/GCA_900063725.1_3850_1_3	-	D31621X
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.06272	39.6	-	FIWS01	88	2227	2015	2/10/16	3/13/17	Scaffold	SC	SAMEA867852	GCA_900063735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/735/GCA_900063735.1_5362_5_9	-	B10622
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.85858	32.7	-	NDWA01	213	2996	2807	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697981	GCA_002126125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/125/GCA_002126125.1_ASM212612v1	28446577	c54
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.44572	51.6	-	MYJZ01	5398	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358602	GCA_002052485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/485/GCA_002052485.1_ASM205248v1	-	BCW_5230
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.73616	52.1	-	MYKE01	2390	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358597	GCA_002052525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/525/GCA_002052525.1_ASM205252v1	-	BCW_5225
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.88964	32.6	-	NDWC01	248	3035	2889	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697979	GCA_002126155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/155/GCA_002126155.1_ASM212615v1	28446577	c52
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.16594	39.6	-	FIXL01	91	2425	2169	2/10/16	3/5/17	Scaffold	SC	SAMEA867877	GCA_900063745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/745/GCA_900063745.1_5362_6_8	-	D24847
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99288	39.8	-	FHLW01	47	2182	1930	2/10/16	3/13/17	Scaffold	SC	SAMEA2336094	GCA_900063965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/965/GCA_900063965.1_12291_5_72	-	2245STDY5699189
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.72029	32.8	-	NDWE01	62	2788	2617	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697977	GCA_002126165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/165/GCA_002126165.1_ASM212616v1	28446577	c50
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.66492	51.9	-	MYKF01	4516	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358596	GCA_002052535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/535/GCA_002052535.1_ASM205253v1	-	BCW_5224
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.12176	51.3	-	MYKH01	6855	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358594	GCA_002052545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/545/GCA_002052545.1_ASM205254v1	-	BCW_5222
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.76878	32.7	-	NDWF01	78	2866	2682	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697976	GCA_002126195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/195/GCA_002126195.1_ASM212619v1	28446577	c49
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08085	39.7	-	FHHP01	39	2286	2062	2/10/16	3/13/17	Scaffold	SC	SAMEA2203958	GCA_900064055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/055/GCA_900064055.1_11658_2_60	-	2245STDY5609099
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.16033	39.6	-	FHJX01	28	2374	2123	2/10/16	3/13/17	Scaffold	SC	SAMEA2335976	GCA_900064065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/065/GCA_900064065.1_12291_4_44	-	2245STDY5699069
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.88796	32.6	-	NDWI01	73	3011	2886	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697972	GCA_002126215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/215/GCA_002126215.1_ASM212621v1	28446577	c45
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.00546	52	-	MYHJ01	3648	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03359730	GCA_002052695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/695/GCA_002052695.1_ASM205269v1	-	BCW_5887
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.48066	51.8	-	MYIG01	1300	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03359704	GCA_002052705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/705/GCA_002052705.1_ASM205270v1	-	BCW_5860
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.72781	32.7	-	NDWJ01	64	2858	2703	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697971	GCA_002126225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/225/GCA_002126225.1_ASM212622v1	28446577	c44
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.07842	39.7	-	FHKA01	42	2289	2073	2/10/16	3/13/17	Scaffold	SC	SAMEA2335979	GCA_900064075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/075/GCA_900064075.1_12291_4_47	-	2245STDY5699072
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04815	39.6	-	FHKI01	19	2262	2024	2/10/16	3/13/17	Scaffold	SC	SAMEA2335986	GCA_900064085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/085/GCA_900064085.1_12291_4_54	-	2245STDY5699079
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.8705	32.7	-	NDWK01	130	3011	2822	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697970	GCA_002126255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/255/GCA_002126255.1_ASM212625v1	28446577	c43
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.54603	52.3	-	MYIK01	2265	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03359700	GCA_002052765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/765/GCA_002052765.1_ASM205276v1	-	BCW_5856
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.22551	51.2	-	MYJL01	9201	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03359673	GCA_002052865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/865/GCA_002052865.1_ASM205286v1	-	BCW_5829
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.86013	32.7	-	NDWL01	136	3021	2821	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697969	GCA_002126275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/275/GCA_002126275.1_ASM212627v1	28446577	abscess130
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04517	39.8	-	FHLX01	37	2248	2006	2/10/16	3/13/17	Scaffold	SC	SAMEA2336169	GCA_900064095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/095/GCA_900064095.1_12299_1_57	-	2245STDY5699265
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.22804	39.6	-	FHLY01	213	2455	2176	2/10/16	3/13/17	Scaffold	SC	SAMEA2336176	GCA_900064105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/105/GCA_900064105.1_12299_1_64	-	2245STDY5699272
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.92537	32.6	-	NDWM01	81	3078	2956	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697968	GCA_002126285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/285/GCA_002126285.1_ASM212628v1	28446577	abscess129
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.56727	52.2	-	MYJS01	2425	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03359666	GCA_002052935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/935/GCA_002052935.1_ASM205293v1	-	BCW_5822
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.91896	52	-	MYKB01	3984	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358600	GCA_002052985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/052/985/GCA_002052985.1_ASM205298v1	-	BCW_5228
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.83022	32.6	-	NDWN01	111	2961	2844	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697967	GCA_002126315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/315/GCA_002126315.1_ASM212631v1	28446577	abscess128
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.11115	39.6	-	FHNP01	42	2320	2094	2/10/16	3/13/17	Scaffold	SC	SAMEA2467733	GCA_900064115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/115/GCA_900064115.1_13154_3_54	-	2245STDY5804502
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06108	39.5	-	FHPG01	44	2290	2044	2/10/16	3/13/17	Scaffold	SC	SAMEA2521528	GCA_900064125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/125/GCA_900064125.1_13414_1_72	-	2245STDY5819493
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.92989	32.7	-	NDWP01	129	3090	2959	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697965	GCA_002126335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/335/GCA_002126335.1_ASM212633v1	28446577	abscess126
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.7217	51.8	-	MYKG01	5763	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358595	GCA_002053025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/025/GCA_002053025.1_ASM205302v1	-	BCW_5223
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.66702	51.6	-	MYKQ01	2111	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358556	GCA_002053105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/105/GCA_002053105.1_ASM205310v1	-	BCW_5102
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.87273	32.6	-	NDWR01	115	2997	2873	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697963	GCA_002126345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/345/GCA_002126345.1_ASM212634v1	28446577	abscess124
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08046	39.7	-	FHPK01	35	2276	2042	2/10/16	3/13/17	Scaffold	SC	SAMEA2521533	GCA_900064135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/135/GCA_900064135.1_13414_1_77	-	2245STDY5819498
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.1324	39.6	-	FHVR01	27	2357	2112	2/10/16	3/13/17	Scaffold	SC	SAMEA2796729	GCA_900064145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/145/GCA_900064145.1_14673_4_36	-	2245STDY5982755
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.77128	32.8	-	NDTH01	40	2863	2746	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698053	GCA_002126375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/375/GCA_002126375.1_ASM212637v1	28446577	CFSA080
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.6605	51.7	-	MYKR01	1674	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358555	GCA_002053145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/145/GCA_002053145.1_ASM205314v1	-	BCW_5101
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.41682	51.9	-	MYKT01	2044	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358553	GCA_002053155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/155/GCA_002053155.1_ASM205315v1	-	BCW_5099
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.74616	32.7	-	NDTL01	66	2814	2690	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698049	GCA_002126385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/385/GCA_002126385.1_ASM212638v1	28446577	CFSA076
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99438	39.7	-	FHVU01	30	2187	1965	2/10/16	3/13/17	Scaffold	SC	SAMEA2796731	GCA_900064155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/155/GCA_900064155.1_14673_4_38	-	2245STDY5982757
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.14897	39.6	-	FHKH01	40	2369	2134	2/10/16	3/13/17	Scaffold	SC	SAMEA2335987	GCA_900064255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/255/GCA_900064255.1_12291_4_55	-	2245STDY5699080
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78819	32.8	-	NDTK01	71	2878	2743	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698050	GCA_002126395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/395/GCA_002126395.1_ASM212639v1	28446577	CFSA077
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.57416	51.7	-	MYKX01	2329	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358549	GCA_002053235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/235/GCA_002053235.1_ASM205323v1	-	BCW_5095
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.62404	51.6	-	MYKY01	1269	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358548	GCA_002053255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/255/GCA_002053255.1_ASM205325v1	-	BCW_5094
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.84127	32.8	-	NDTM01	49	2954	2826	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698048	GCA_002126435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/435/GCA_002126435.1_ASM212643v1	28446577	CFSA075
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06657	39.6	-	FHFR01	35	2279	2040	2/10/16	3/6/17	Scaffold	SC	SAMEA2203893	GCA_900064595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/595/GCA_900064595.1_11679_1_34	-	2245STDY5609033
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.07367	39.7	-	FHFU01	32	2272	2039	2/10/16	3/13/17	Scaffold	SC	SAMEA2203897	GCA_900064605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/605/GCA_900064605.1_11511_8_40	-	2245STDY5609037
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78165	32.8	-	NDTP01	32	2853	2751	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698045	GCA_002126445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/445/GCA_002126445.1_ASM212644v1	28446577	CFSA072
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.59152	51.6	-	MYLK01	628	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358531	GCA_002053425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/425/GCA_002053425.1_ASM205342v1	-	BCW_5054
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.66573	51.6	-	MYLU01	2451	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358518	GCA_002053555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/555/GCA_002053555.1_ASM205355v1	-	BCW_5040
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.65498	32.7	-	NDTR01	32	2729	2586	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698043	GCA_002126455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/455/GCA_002126455.1_ASM212645v1	28446577	CFSA070
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.11936	39.6	-	FHFV01	121	2312	2078	2/10/16	3/13/17	Scaffold	SC	SAMEA2203898	GCA_900064615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/615/GCA_900064615.1_11658_2_81	-	2245STDY5609038
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06838	39.5	-	FHIT01	28	2236	2023	2/10/16	3/12/17	Scaffold	SC	SAMEA2204025	GCA_900064625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/625/GCA_900064625.1_11658_2_50	-	2245STDY5609166
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.88117	32.6	-	NDTS01	84	3017	2897	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698042	GCA_002126495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/495/GCA_002126495.1_ASM212649v1	28446577	CFSA055
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.33202	51.9	-	MYMG01	2478	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358501	GCA_002053635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/635/GCA_002053635.1_ASM205363v1	-	BCW_4987
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.50861	51.6	-	MYMK01	1149	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358497	GCA_002053705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/705/GCA_002053705.1_ASM205370v1	-	BCW_4983
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.85301	32.7	-	NDTT01	50	2977	2866	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698041	GCA_002126515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/515/GCA_002126515.1_ASM212651v1	28446577	CFSA054
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06	39.7	-	FHNC01	42	2256	2034	2/10/16	3/13/17	Scaffold	SC	SAMEA2467715	GCA_900064635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/635/GCA_900064635.1_13154_3_38	-	2245STDY5804484
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0634	39.6	-	FHSE01	16	2270	2033	2/10/16	3/13/17	Scaffold	SC	SAMEA2521620	GCA_900064645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/645/GCA_900064645.1_13414_2_69	-	2245STDY5819586
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.88868	32.6	-	NDTU01	57	3019	2905	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698040	GCA_002126525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/525/GCA_002126525.1_ASM212652v1	28446577	CFSA053
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.47088	51.8	-	MYMM01	2767	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358495	GCA_002053715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/715/GCA_002053715.1_ASM205371v1	-	BCW_4960
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.48917	51.8	-	MYMN01	2719	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358494	GCA_002053745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/745/GCA_002053745.1_ASM205374v1	-	BCW_4959
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.79152	32.8	-	NDVR01	62	2866	2753	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697990	GCA_002126545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/545/GCA_002126545.1_ASM212654v1	28446577	CFSA003
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.06163	39.6	-	FHVS01	22	2265	2037	2/10/16	3/13/17	Scaffold	SC	SAMEA2796728	GCA_900064655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/655/GCA_900064655.1_14673_4_35	-	2245STDY5982754
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.05	39.7	-	FHGX01	52	2285	2012	2/10/16	3/13/17	Scaffold	SC	SAMEA2203937	GCA_900064805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/805/GCA_900064805.1_11679_1_38	-	2245STDY5609077
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.79472	32.7	-	NDTV01	46	2885	2762	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698039	GCA_002126565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/565/GCA_002126565.1_ASM212656v1	28446577	CFSA052
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.72532	51.7	-	MYMQ01	3721	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358491	GCA_002053755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/755/GCA_002053755.1_ASM205375v1	-	BCW_4956
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.42543	51.7	-	MYMR01	2281	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358490	GCA_002053775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/775/GCA_002053775.1_ASM205377v1	-	BCW_4955
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78061	32.7	-	NDTW01	36	2878	2739	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698038	GCA_002126595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/595/GCA_002126595.1_ASM212659v1	28446577	CFSA051
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04778	39.8	-	FHKO01	41	2259	2022	2/10/16	3/6/17	Scaffold	SC	SAMEA2335993	GCA_900064815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/815/GCA_900064815.1_12291_4_61	-	2245STDY5699086
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08736	39.5	-	FHKP01	28	2280	2032	2/10/16	3/13/17	Scaffold	SC	SAMEA2335995	GCA_900064825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/825/GCA_900064825.1_12291_4_63	-	2245STDY5699088
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.87826	32.6	-	NDUB01	53	3005	2893	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698033	GCA_002126605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/605/GCA_002126605.1_ASM212660v1	28446577	CFSA046
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.50568	51.8	-	MYMS01	2716	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358489	GCA_002053795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/795/GCA_002053795.1_ASM205379v1	-	BCW_4954
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.49415	51.8	-	MYMU01	2825	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358487	GCA_002053845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/845/GCA_002053845.1_ASM205384v1	-	BCW_4952
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.88237	32.6	-	NDUE01	56	3012	2894	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698030	GCA_002126635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/635/GCA_002126635.1_ASM212663v1	28446577	CFSA043
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.11683	39.5	-	FHMW01	77	2348	2093	2/10/16	3/13/17	Scaffold	SC	SAMEA2467576	GCA_900064835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/835/GCA_900064835.1_13154_3_32	-	2245STDY5804477
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.17152	39.6	-	FHON01	218	2391	2100	2/10/16	3/13/17	Scaffold	SC	SAMEA2467764	GCA_900064845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/845/GCA_900064845.1_13154_3_85	-	2245STDY5804533
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.81756	32.7	-	NDUH01	61	2894	2781	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698026	GCA_002126655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/655/GCA_002126655.1_ASM212665v1	28446577	CFSA039
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.55415	51.4	-	MYMX01	900	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358484	GCA_002053875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/875/GCA_002053875.1_ASM205387v1	-	BCW_4949
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.55043	51.6	-	MYMZ01	2463	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358482	GCA_002053935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/935/GCA_002053935.1_ASM205393v1	-	BCW_4947
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.87926	32.6	-	NDUI01	60	3004	2881	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698025	GCA_002126675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/675/GCA_002126675.1_ASM212667v1	28446577	CFSA038
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0717	39.5	-	FHQF01	36	2294	2062	2/10/16	3/13/17	Scaffold	SC	SAMEA2521557	GCA_900064855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/855/GCA_900064855.1_13414_2_6	-	2245STDY5819523
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.05662	39.6	-	FHQJ01	21	2273	2031	2/10/16	3/13/17	Scaffold	SC	SAMEA2521563	GCA_900064865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/865/GCA_900064865.1_13414_2_12	-	2245STDY5819529
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.82054	32.8	-	NDUK01	54	2918	2789	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698023	GCA_002126685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/685/GCA_002126685.1_ASM212668v1	28446577	CFSA036
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.48037	51.7	-	MYNE01	2038	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358477	GCA_002053945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/053/945/GCA_002053945.1_ASM205394v1	-	BCW_4942
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.42008	51.7	-	MYLH01	1409	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358539	GCA_002054685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/685/GCA_002054685.1_ASM205468v1	-	BCW_5085
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.83696	32.6	-	NDUP01	99	2943	2814	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698018	GCA_002126695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/695/GCA_002126695.1_ASM212669v1	28446577	CFSA031
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.09482	39.6	-	FHRK01	32	2270	2055	2/10/16	3/5/17	Scaffold	SC	SAMEA2521599	GCA_900064875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/875/GCA_900064875.1_13414_2_48	-	2245STDY5819565
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.05753	39.6	-	FHSR01	33	2220	2007	2/10/16	3/13/17	Scaffold	SC	SAMEA2521637	GCA_900064885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/885/GCA_900064885.1_13414_2_86	-	2245STDY5819603
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.83651	32.8	-	NDUS01	141	2969	2804	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698015	GCA_002126735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/735/GCA_002126735.1_ASM212673v1	28446577	CFSA028
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.42411	51.7	-	MYLY01	1213	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358512	GCA_002054795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/795/GCA_002054795.1_ASM205479v1	-	BCW_5012
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.41109	51.9	-	MYMC01	2105	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358507	GCA_002054845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/054/845/GCA_002054845.1_ASM205484v1	-	BCW_5007
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.83985	32.8	-	NDUT01	170	2949	2804	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698014	GCA_002126755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/755/GCA_002126755.1_ASM212675v1	28446577	CFSA027
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04918	39.5	-	FHTV01	43	2240	2016	2/10/16	3/13/17	Scaffold	SC	SAMEA2796419	GCA_900064895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/895/GCA_900064895.1_14673_1_11	-	2245STDY5982440
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.05907	39.5	-	FHTW01	36	2282	2045	2/10/16	3/13/17	Scaffold	SC	SAMEA2796420	GCA_900064905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/905/GCA_900064905.1_14673_1_12	-	2245STDY5982441
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.76322	32.8	-	NDUU01	98	2820	2683	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698013	GCA_002126765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/765/GCA_002126765.1_ASM212676v1	28446577	CFSA026
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.65398	51.8	-	MYMV01	2740	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358486	GCA_002055005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/055/005/GCA_002055005.1_ASM205500v1	-	BCW_4951
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.43396	51.1	-	MYRY01	5357	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358069	GCA_002056675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/675/GCA_002056675.1_ASM205667v1	-	BCW_4386
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.80339	32.8	-	NDUY01	85	2887	2765	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698009	GCA_002126775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/775/GCA_002126775.1_ASM212677v1	28446577	CFSA022
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.15981	39.5	-	FHUA01	70	2362	2107	2/10/16	3/13/17	Scaffold	SC	SAMEA2796483	GCA_900064915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/915/GCA_900064915.1_14673_1_75	-	2245STDY5982504
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08537	39.8	-	FHUG01	44	2318	2085	2/10/16	3/5/17	Scaffold	SC	SAMEA2796490	GCA_900064925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/925/GCA_900064925.1_14673_1_82	-	2245STDY5982511
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.88371	32.6	-	NDVH01	59	3010	2890	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698000	GCA_002126815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/815/GCA_002126815.1_ASM212681v1	28446577	CFSA013
Salmonella enterica subsp. enterica serovar Agona	58095	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.97311	51.9	-	MYSV01	1879	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN02368961	GCA_002056995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/056/995/GCA_002056995.1_ASM205699v1	-	BCW_4363
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.06208	52.1	-	MYRT01	2549	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358074	GCA_002057745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/745/GCA_002057745.1_ASM205774v1	-	BCW_4391
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78603	32.8	-	NDVJ01	42	2861	2745	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697998	GCA_002126835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/835/GCA_002126835.1_ASM212683v1	28446577	CFSA011
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04632	39.8	-	FHVO01	40	2249	2025	2/10/16	3/5/17	Scaffold	SC	SAMEA2796725	GCA_900064935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/935/GCA_900064935.1_14673_4_32	-	2245STDY5982751
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.98159	39.7	-	FHVT01	22	2197	1956	2/10/16	3/13/17	Scaffold	SC	SAMEA2796730	GCA_900064945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/945/GCA_900064945.1_14673_4_37	-	2245STDY5982756
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.94951	32.7	-	NDVL01	271	3120	2924	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697996	GCA_002126845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/845/GCA_002126845.1_ASM212684v1	28446577	CFSA009
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.02408	52.1	-	MYRX01	2701	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358070	GCA_002057785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/057/785/GCA_002057785.1_ASM205778v1	-	BCW_4387
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.88087	52.1	-	MYTH01	1967	-	-	3/21/17	3/21/17	Contig	University of California at Davis	SAMN03358062	GCA_002058225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/058/225/GCA_002058225.1_ASM205822v1	-	BCW_4350
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78713	32.7	-	NDVP01	39	2901	2751	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697992	GCA_002126875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/875/GCA_002126875.1_ASM212687v1	28446577	CFSA005
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.0526	39.7	-	FITO01	167	2262	1976	2/10/16	3/13/17	Scaffold	SC	SAMEA2467750	GCA_900065085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/085/GCA_900065085.1_13154_3_71	-	2245STDY5804519
Streptococcus pneumoniae	1313	PRJEB2098	203734	Terrabacteria group	Firmicutes	2.07028	39.6	-	FIUU01	64	2300	2067	2/10/16	3/13/17	Scaffold	SC	SAMEA807333	GCA_900065105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/105/GCA_900065105.1_4353_2_4	-	69C12907
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.78836	32.6	-	NDVQ01	66	2873	2747	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697991	GCA_002126885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/885/GCA_002126885.1_ASM212688v1	28446577	CFSA004
Salmonella enterica subsp. enterica serovar Muenchen	596	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.58492	51.7	-	MXSA01	122	-	-	3/22/17	3/22/17	Contig	University of California at Davis	SAMN02368780	GCA_002059995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/059/995/GCA_002059995.1_ASM205999v1	-	BCW_3961
Salmonella enterica subsp. enterica serovar Enteritidis	149539	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.50639	51.5	-	MXSR01	602	-	-	3/22/17	3/22/17	Contig	University of California at Davis	SAMN02368391	GCA_002060205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/205/GCA_002060205.1_ASM206020v1	-	NCTR-SF068
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.8293	32.7	-	NDVT01	85	2956	2845	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697988	GCA_002126915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/915/GCA_002126915.1_ASM212691v1	28446577	c61
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04673	39.8	-	FHIZ01	37	2256	2023	2/10/16	3/13/17	Scaffold	SC	SAMEA2335948	GCA_900065135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/135/GCA_900065135.1_12291_4_16	-	2245STDY5699041
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08384	39.6	-	FHJH01	29	2315	2061	2/10/16	3/13/17	Scaffold	SC	SAMEA2335957	GCA_900065145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/145/GCA_900065145.1_12291_4_25	-	2245STDY5699050
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.71856	32.7	-	NDVW01	85	2772	2654	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697985	GCA_002126925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/925/GCA_002126925.1_ASM212692v1	28446577	c58
Salmonella enterica	28901	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	5.68726	51.6	-	MXTG01	1364	-	-	3/22/17	3/22/17	Contig	University of California at Davis	SAMN03358934	GCA_002060345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/060/345/GCA_002060345.1_ASM206034v1	-	BCW_3387
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.71998	52.1	-	MXYI01	2145	-	-	3/22/17	3/22/17	Contig	University of California at Davis	SAMN02368691	GCA_002063425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/425/GCA_002063425.1_ASM206342v1	-	BCW_2824
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.76865	32.8	-	NDWB01	72	2860	2698	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697980	GCA_002126955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/955/GCA_002126955.1_ASM212695v1	28446577	c53
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.07255	39.7	-	FHJK01	86	2261	2031	2/10/16	3/13/17	Scaffold	SC	SAMEA2335959	GCA_900065155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/155/GCA_900065155.1_12291_4_27	-	2245STDY5699052
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.07734	39.7	-	FHNL01	38	2285	2040	2/10/16	3/18/17	Scaffold	SC	SAMEA2467728	GCA_900065165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/165/GCA_900065165.1_13154_3_49	-	2245STDY5804497
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.72554	32.7	-	NDWD01	63	2819	2663	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697978	GCA_002126975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/975/GCA_002126975.1_ASM212697v1	28446577	c51
Salmonella enterica subsp. enterica serovar Virginia	140099	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.69144	51.9	-	MXYN01	2790	-	-	3/22/17	3/22/17	Contig	University of California at Davis	SAMN02368686	GCA_002063485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/485/GCA_002063485.1_ASM206348v1	-	BCW_2819
Salmonella enterica subsp. enterica serovar Virchow	48409	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.04475	52.3	-	MXYQ01	61	-	-	3/22/17	3/22/17	Contig	University of California at Davis	SAMN02368683	GCA_002063495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/495/GCA_002063495.1_ASM206349v1	-	BCW_2816
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.8117	32.7	-	NDWH01	57	2954	2802	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697973	GCA_002126985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/126/985/GCA_002126985.1_ASM212698v1	28446577	c46
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.16284	39.5	-	FHPX01	69	2353	2106	2/10/16	3/13/17	Scaffold	SC	SAMEA2521545	GCA_900065175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/175/GCA_900065175.1_13414_1_89	-	2245STDY5819510
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.05946	39.5	-	FHHH01	42	2279	2032	2/10/16	3/13/17	Scaffold	SC	SAMEA2203950	GCA_900065355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/355/GCA_900065355.1_11658_2_62	-	2245STDY5609091
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.73378	32.8	-	NDWO01	42	2828	2690	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697966	GCA_002127005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/005/GCA_002127005.1_ASM212700v1	28446577	abscess127
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.88863	52	-	MXZB01	1992	-	-	3/22/17	3/22/17	Contig	University of California at Davis	SAMN02368669	GCA_002063715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/063/715/GCA_002063715.1_ASM206371v1	-	BCW_2797
Salmonella enterica subsp. enterica serovar Panama	29472	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.63842	52.1	-	MYAI01	1616	-	-	3/22/17	3/22/17	Contig	University of California at Davis	SAMN02368633	GCA_002065275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/275/GCA_002065275.1_ASM206527v1	-	BCW_2756
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.74496	32.7	-	NDWG01	46	2845	2693	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697974	GCA_002127025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/025/GCA_002127025.1_ASM212702v1	28446577	c47
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.11027	39.6	-	FHGA01	33	2307	2081	2/10/16	3/5/17	Scaffold	SC	SAMEA2203902	GCA_900065465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/465/GCA_900065465.1_11511_8_41	-	2245STDY5609042
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.03147	39.8	-	FHHB01	132	2219	1949	2/10/16	3/15/17	Scaffold	SC	SAMEA2203941	GCA_900065475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/475/GCA_900065475.1_11511_8_50	-	2245STDY5609081
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.92201	32.6	-	NDWS01	133	3081	2961	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697961	GCA_002127055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/055/GCA_002127055.1_ASM212705v1	28446577	abscess122
Salmonella enterica subsp. enterica serovar Panama	29472	PRJNA203445	203445	Proteobacteria	Gammaproteobacteria	4.88085	52	-	MYAK01	2045	-	-	3/22/17	3/22/17	Contig	University of California at Davis	SAMN02368631	GCA_002065295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/065/295/GCA_002065295.1_ASM206529v1	-	BCW_2754
"Salmonella enterica subsp. enterica serovar Rough O:d:1,7"	1974323	PRJNA183850	183850	Proteobacteria	Gammaproteobacteria	5.78116	51.6	-	NBPI01	149	6045	5662	4/24/17	4/24/17	Contig	New York State Dept. of Health - Wadsworth Center	SAMN01902444	GCA_002106425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/106/425/GCA_002106425.1_ASM210642v1	-	NY_FSL S10-1448
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.89194	32.7	-	NDWQ01	67	3039	2927	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697964	GCA_002127065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/065/GCA_002127065.1_ASM212706v1	28446577	abscess125
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04411	39.7	-	FHHU01	17	2261	2025	2/10/16	3/6/17	Scaffold	SC	SAMEA2204002	GCA_900065485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/485/GCA_900065485.1_11657_8_29	-	2245STDY5609143
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08646	39.5	-	FHJC01	45	2297	2045	2/10/16	3/13/17	Scaffold	SC	SAMEA2335951	GCA_900065495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/495/GCA_900065495.1_12291_4_19	-	2245STDY5699044
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.87409	32.6	-	NDRZ01	124	3014	2894	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698087	GCA_002127455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/455/GCA_002127455.1_ASM212745v1	28446577	CFSA116
Salmonella enterica	28901	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.90756	51.9	-	NJEW01	5	5056	4472	6/23/17	6/23/17	Contig	US Food and Drug Administration 	SAMN06173327	GCA_002206165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/165/GCA_002206165.1_ASM220616v1	-	FDAARGOS_314
Salmonella enterica	28901	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.02539	52.2	-	NJFG01	4	5201	4253	6/23/17	6/23/17	Contig	US Food and Drug Administration 	SAMN06173328	GCA_002206245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/245/GCA_002206245.1_ASM220624v1	-	FDAARGOS_315
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.92496	32.6	-	NDNG01	95	3073	2948	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698210	GCA_002127465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/465/GCA_002127465.1_ASM212746v1	28446577	CFSA279
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.10985	39.6	-	FHKK01	29	2331	2092	2/10/16	3/6/17	Scaffold	SC	SAMEA2335988	GCA_900065505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/505/GCA_900065505.1_12291_4_56	-	2245STDY5699081
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.08705	39.8	-	FHLI01	38	2302	2074	2/10/16	3/5/17	Scaffold	SC	SAMEA2336020	GCA_900065515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/515/GCA_900065515.1_12291_4_88	-	2245STDY5699113
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.88105	32.6	-	NDVN01	66	3010	2886	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06697994	GCA_002127475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/475/GCA_002127475.1_ASM212747v1	28446577	CFSA007
Salmonella enterica	28901	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	5.09033	52.1	-	NJFE01	2	5302	4382	6/23/17	6/23/17	Contig	US Food and Drug Administration 	SAMN06173331	GCA_002206495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/495/GCA_002206495.1_ASM220649v1	-	FDAARGOS_318
Salmonella enterica	28901	PRJNA231221	231221	Proteobacteria	Gammaproteobacteria	4.74608	52.2	-	NJFF01	2	4844	4139	6/23/17	6/23/17	Contig	US Food and Drug Administration 	SAMN06173329	GCA_002206525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/525/GCA_002206525.1_ASM220652v1	-	FDAARGOS_316
Staphylococcus aureus	1280	PRJNA380429	380429	Terrabacteria group	Firmicutes	2.88574	32.6	-	NDOU01	64	3020	2892	5/10/17	5/22/17	Scaffold	"Department of Infection Prevention and Control, Infectious Diseases Division, Cincinnati Children's Hospital Medical Center,"	SAMN06698170	GCA_002127485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/127/485/GCA_002127485.1_ASM212748v1	28446577	CFSA228
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.15041	39.6	-	FHLZ01	159	2341	2099	2/10/16	3/13/17	Scaffold	SC	SAMEA2336191	GCA_900065525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/525/GCA_900065525.1_12299_1_79	-	2245STDY5699288
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.22151	39.8	-	FHMC01	299	2397	2105	2/10/16	3/13/17	Scaffold	SC	SAMEA2467529	GCA_900065535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/535/GCA_900065535.1_13091_6_78	-	2245STDY5804429
Staphylococcus aureus	1280	PRJNA374796	374796	Terrabacteria group	Firmicutes	2.81595	32.7	-	MVFW01	54	2931	2735	5/22/17	5/24/17	Scaffold	Aarhus University	SAMN06335552	GCA_002156445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/156/445/GCA_002156445.1_ASM215644v1	-	I3
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA396575	396575	Proteobacteria	Gammaproteobacteria	4.5958	51.8	-	NRDM01	3466	-	-	9/13/17	9/13/17	Contig	Fluminense Federal University	SAMN07444253	GCA_002300245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/245/GCA_002300245.1_ASM230024v1	-	ST_PP_BR062
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA396575	396575	Proteobacteria	Gammaproteobacteria	4.63619	52	-	NRDL01	3535	-	-	9/13/17	9/13/17	Contig	Fluminense Federal University	SAMN07443992	GCA_002300255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/255/GCA_002300255.1_ASM230025v1	-	ST_PP_BR057
Staphylococcus aureus subsp. aureus	46170	PRJNA393756	393756	Terrabacteria group	Firmicutes	2.96915	32.6	-	NMVT01	61	3160	3003	7/25/17	7/28/17	Scaffold	Chang Gung Memorial Hospital	SAMN07340944	GCA_002224915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/915/GCA_002224915.1_ASM222491v1	-	TW22
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.13613	39.5	-	FHME01	180	2339	2087	2/10/16	3/5/17	Scaffold	SC	SAMEA2467537	GCA_900065545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/545/GCA_900065545.1_13091_6_86	-	2245STDY5804437
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.04085	39.8	-	FHNX01	65	2227	1991	2/10/16	3/13/17	Scaffold	SC	SAMEA2467746	GCA_900065555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/555/GCA_900065555.1_13154_3_67	-	2245STDY5804515
Staphylococcus aureus subsp. aureus	46170	PRJNA393756	393756	Terrabacteria group	Firmicutes	2.87097	32.7	-	NMVU01	47	3016	2876	7/25/17	7/28/17	Scaffold	Chang Gung Memorial Hospital	SAMN07340943	GCA_002224925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/925/GCA_002224925.1_ASM222492v1	-	TW21
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA396575	396575	Proteobacteria	Gammaproteobacteria	3.99612	-	-	NRDN01	5539	-	-	9/13/17	9/13/17	Contig	Fluminense Federal University	SAMN07444512	GCA_002300275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/300/275/GCA_002300275.1_ASM230027v1	-	ST_PP_BR063
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJEB2127	203935	Proteobacteria	Gammaproteobacteria	4.73679	51.9	-	CQPI01	53	4660	4606	3/23/15	6/14/15	Scaffold	SC	SAMEA786297	GCA_001083855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/855/GCA_001083855.1_4074_1_12	-	A1608
Staphylococcus aureus subsp. aureus	46170	PRJNA393756	393756	Terrabacteria group	Firmicutes	2.8789	32.6	-	NMVV01	41	3004	2882	7/25/17	7/28/17	Scaffold	Chang Gung Memorial Hospital	SAMN07340942	GCA_002224955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/955/GCA_002224955.1_ASM222495v1	-	TW20
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.97295	39.8	-	FHPC01	37	2192	1941	2/10/16	3/13/17	Scaffold	SC	SAMEA2521519	GCA_900065565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/565/GCA_900065565.1_13414_1_63	-	2245STDY5819484
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.10315	39.5	-	FHQI01	65	2280	2033	2/10/16	3/13/17	Scaffold	SC	SAMEA2521562	GCA_900065575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/575/GCA_900065575.1_13414_2_11	-	2245STDY5819528
Staphylococcus aureus subsp. aureus	46170	PRJNA393756	393756	Terrabacteria group	Firmicutes	2.88315	32.6	-	NMVY01	44	3006	2873	7/25/17	7/28/17	Scaffold	Chang Gung Memorial Hospital	SAMN07340939	GCA_002224965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/965/GCA_002224965.1_ASM222496v1	-	TW17
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJEB2127	203935	Proteobacteria	Gammaproteobacteria	4.78027	52	-	CQPE01	48	4610	4540	3/23/15	6/14/15	Scaffold	SC	SAMEA786302	GCA_001087425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/425/GCA_001087425.1_4074_2_8	-	A8737
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJEB2127	203935	Proteobacteria	Gammaproteobacteria	4.78709	51.8	-	CQPG01	57	4691	4628	3/23/15	6/13/15	Scaffold	SC	SAMEA786282	GCA_001111645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/645/GCA_001111645.1_4074_1_7	-	D1253
Staphylococcus aureus subsp. aureus	46170	PRJNA393756	393756	Terrabacteria group	Firmicutes	2.92496	32.7	-	NMVW01	39	3084	2958	7/25/17	7/28/17	Scaffold	Chang Gung Memorial Hospital	SAMN07340941	GCA_002224995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/224/995/GCA_002224995.1_ASM222499v1	-	TW19
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.96821	39.8	-	FHSM01	30	2187	1956	2/10/16	3/13/17	Scaffold	SC	SAMEA2521630	GCA_900065585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/585/GCA_900065585.1_13414_2_79	-	2245STDY5819596
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.99059	39.8	-	FHSP01	48	2191	1933	2/10/16	3/6/17	Scaffold	SC	SAMEA2521631	GCA_900065595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/595/GCA_900065595.1_13414_2_80	-	2245STDY5819597
Staphylococcus aureus subsp. aureus	46170	PRJNA393756	393756	Terrabacteria group	Firmicutes	2.90561	32.6	-	NMVZ01	44	3038	2908	7/25/17	7/28/17	Scaffold	Chang Gung Memorial Hospital	SAMN07340938	GCA_002225015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/015/GCA_002225015.1_ASM222501v1	-	TW16
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJEB2127	203935	Proteobacteria	Gammaproteobacteria	4.79802	51.5	-	CQPA01	140	5032	4982	3/23/15	6/13/15	Scaffold	SC	SAMEA786292	GCA_001114865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/865/GCA_001114865.1_4074_1_11	-	A1104
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJEB2127	203935	Proteobacteria	Gammaproteobacteria	4.7747	52	-	CQPK01	61	4636	4581	3/23/15	6/14/15	Scaffold	SC	SAMEA786280	GCA_001123425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/425/GCA_001123425.1_4074_1_9	-	D4451
Staphylococcus aureus subsp. aureus	46170	PRJNA393756	393756	Terrabacteria group	Firmicutes	2.92041	32.7	-	NMVX01	44	3070	2943	7/25/17	7/28/17	Scaffold	Chang Gung Memorial Hospital	SAMN07340940	GCA_002225035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/035/GCA_002225035.1_ASM222503v1	-	TW18
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.03341	39.8	-	FHUO01	41	2228	2000	2/10/16	3/13/17	Scaffold	SC	SAMEA2796560	GCA_900065615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/615/GCA_900065615.1_14673_2_57	-	2245STDY5982582
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.02966	39.8	-	FHUQ01	39	2227	1995	2/10/16	3/5/17	Scaffold	SC	SAMEA2796603	GCA_900065625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/625/GCA_900065625.1_14673_3_5	-	2245STDY5982626
Staphylococcus aureus subsp. aureus	46170	PRJNA393756	393756	Terrabacteria group	Firmicutes	2.91652	32.7	-	NMVS01	42	3074	2948	7/25/17	7/28/17	Scaffold	Chang Gung Memorial Hospital	SAMN07340945	GCA_002225055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/055/GCA_002225055.1_ASM222505v1	-	TW23
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJEB2127	203935	Proteobacteria	Gammaproteobacteria	4.76994	52.1	-	CQPO01	38	4602	4527	3/23/15	6/13/15	Scaffold	SC	SAMEA786301	GCA_001126625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/625/GCA_001126625.1_4074_2_7	-	A5893
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJEB2127	203935	Proteobacteria	Gammaproteobacteria	4.91264	51.6	-	CQPC01	181	4893	4849	3/23/15	6/13/15	Scaffold	SC	SAMEA786284	GCA_001126725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/126/725/GCA_001126725.1_4074_1_5	-	3476
Staphylococcus aureus subsp. aureus	46170	PRJNA393756	393756	Terrabacteria group	Firmicutes	2.87639	32.6	-	NMWA01	44	3004	2876	7/25/17	7/28/17	Scaffold	Chang Gung Memorial Hospital	SAMN07340937	GCA_002225085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/085/GCA_002225085.1_ASM222508v1	-	TW15
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.05112	39.6	-	FHVV01	43	2227	2001	2/10/16	3/18/17	Scaffold	SC	SAMEA2796732	GCA_900065635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/635/GCA_900065635.1_14673_4_39	-	2245STDY5982758
Streptococcus pneumoniae	1313	PRJEB2102	203746	Terrabacteria group	Firmicutes	2.09334	39.6	-	FITV01	56	2350	2085	2/10/16	3/13/17	Scaffold	SC	SAMEA686070	GCA_900065835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/835/GCA_900065835.1_4525_8_9	-	D36913
Staphylococcus aureus subsp. aureus	46170	PRJNA393756	393756	Terrabacteria group	Firmicutes	2.8813	32.6	-	NMWC01	55	3010	2878	7/25/17	7/28/17	Scaffold	Chang Gung Memorial Hospital	SAMN07340935	GCA_002225105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/105/GCA_002225105.1_ASM222510v1	-	TW13
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2746	204388	Proteobacteria	Gammaproteobacteria	5.78754	49.3	-	CQIE01	664	5363	5270	3/22/15	6/13/15	Scaffold	SC	SAMEA1568500	GCA_001144305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/144/305/GCA_001144305.1_8490_2_86	-	CH43
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJEB2127	203935	Proteobacteria	Gammaproteobacteria	4.81551	51.9	-	CQPJ01	66	4711	4653	3/23/15	6/13/15	Scaffold	SC	SAMEA786285	GCA_001155245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/245/GCA_001155245.1_4074_1_4	-	3180
Staphylococcus aureus subsp. aureus	46170	PRJNA393756	393756	Terrabacteria group	Firmicutes	2.88068	32.6	-	NMWB01	40	3006	2881	7/25/17	7/28/17	Scaffold	Chang Gung Memorial Hospital	SAMN07340936	GCA_002225135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/135/GCA_002225135.1_ASM222513v1	-	TW14
Streptococcus pneumoniae	1313	PRJEB2131	203951	Terrabacteria group	Firmicutes	2.10455	39.3	-	FIVS01	83	2302	2092	2/10/16	3/5/17	Scaffold	SC	SAMEA867801	GCA_900065845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/845/GCA_900065845.1_5362_5_1	-	A29037
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.02278	39.6	-	FIWO01	33	2218	1991	2/10/16	3/5/17	Scaffold	SC	SAMEA1033744	GCA_900065855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/855/GCA_900065855.1_7004_3_51	-	C12675a
Staphylococcus aureus subsp. aureus	46170	PRJNA393756	393756	Terrabacteria group	Firmicutes	2.87674	32.6	-	NMWD01	46	3007	2877	7/25/17	7/28/17	Scaffold	Chang Gung Memorial Hospital	SAMN07340934	GCA_002225155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/155/GCA_002225155.1_ASM222515v1	-	TW12
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJEB2127	203935	Proteobacteria	Gammaproteobacteria	4.77544	52	-	CQPB01	67	4671	4612	3/23/15	6/13/15	Scaffold	SC	SAMEA786294	GCA_001159165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/159/165/GCA_001159165.1_4074_1_1	-	3114
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJEB2127	203935	Proteobacteria	Gammaproteobacteria	4.79111	51.5	-	CQPD01	139	4882	4830	3/22/15	6/13/15	Scaffold	SC	SAMEA786279	GCA_001172045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/045/GCA_001172045.1_4074_1_10	-	D4891
Staphylococcus aureus subsp. aureus	46170	PRJNA393756	393756	Terrabacteria group	Firmicutes	2.88166	32.6	-	NMWE01	40	3010	2881	7/25/17	7/28/17	Scaffold	Chang Gung Memorial Hospital	SAMN07340933	GCA_002225175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/175/GCA_002225175.1_ASM222517v1	-	TW11
Streptococcus pneumoniae	1313	PRJEB2098	203734	Terrabacteria group	Firmicutes	2.03244	39.6	-	FIXO01	59	2220	2013	2/10/16	3/13/17	Scaffold	SC	SAMEA807322	GCA_900065865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/065/865/GCA_900065865.1_4353_2_10	-	73D36881
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.07529	39.7	-	FWUJ01	255	2244	2058	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545914	GCA_900170045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/045/GCA_900170045.1_Hermans-284	-	-
Staphylococcus aureus subsp. aureus	46170	PRJNA393756	393756	Terrabacteria group	Firmicutes	2.88238	32.6	-	NMWF01	37	3010	2891	7/25/17	7/28/17	Scaffold	Chang Gung Memorial Hospital	SAMN07340932	GCA_002225195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/195/GCA_002225195.1_ASM222519v1	-	TW10
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJEB2127	203935	Proteobacteria	Gammaproteobacteria	4.89121	52	-	CQPH01	63	4761	4696	3/23/15	6/13/15	Scaffold	SC	SAMEA786283	GCA_001172165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/165/GCA_001172165.1_4074_1_6	-	D993
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJEB2127	203935	Proteobacteria	Gammaproteobacteria	4.77892	52	-	CQPF01	61	4615	4537	3/23/15	6/13/15	Scaffold	SC	SAMEA786287	GCA_001174385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/385/GCA_001174385.1_4074_2_2	-	A16982
Staphylococcus aureus subsp. aureus	46170	PRJNA393756	393756	Terrabacteria group	Firmicutes	2.87599	32.6	-	NMWH01	43	3002	2872	7/25/17	7/28/17	Scaffold	Chang Gung Memorial Hospital	SAMN07340930	GCA_002225215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/215/GCA_002225215.1_ASM222521v1	-	TW08
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.09377	39.7	-	FWUB01	346	2247	2045	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545865	GCA_900170055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/055/GCA_900170055.1_Hermans-1353	-	-
Streptococcus pneumoniae	1313	PRJEB10893	314860	Terrabacteria group	Firmicutes	2.2114	39.5	-	FWSL01	382	2397	2182	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545826	GCA_900170065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/065/GCA_900170065.1_PMEN	-	-
Staphylococcus aureus subsp. aureus	46170	PRJNA393756	393756	Terrabacteria group	Firmicutes	2.92751	32.7	-	NMWG01	41	3076	2954	7/25/17	7/28/17	Scaffold	Chang Gung Memorial Hospital	SAMN07340931	GCA_002225235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/235/GCA_002225235.1_ASM222523v1	-	TW09
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJEB2127	203935	Proteobacteria	Gammaproteobacteria	4.73044	52.1	-	CQPN01	43	4577	4510	3/23/15	6/13/15	Scaffold	SC	SAMEA786288	GCA_001174905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/905/GCA_001174905.1_4074_2_1	-	A1668
Salmonella enterica subsp. enterica serovar Infantis	595	PRJNA287014	287014	Proteobacteria	Gammaproteobacteria	4.91398	52.1	-	LFGU01	1150	5361	5290	7/24/15	7/24/15	Scaffold	University of Coimbra	SAMN03774905	GCA_001187315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/315/GCA_001187315.1_ASM118731v1	-	SAl147
Staphylococcus aureus subsp. aureus	46170	PRJNA393756	393756	Terrabacteria group	Firmicutes	2.87997	32.6	-	NMWI01	43	3011	2880	7/25/17	7/28/17	Scaffold	Chang Gung Memorial Hospital	SAMN07340929	GCA_002225245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/245/GCA_002225245.1_ASM222524v1	-	TW07_4
Streptococcus pneumoniae	1313	PRJEB10893	314860	Terrabacteria group	Firmicutes	2.13373	39.4	-	FWSU01	308	2283	2082	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545822	GCA_900170075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/075/GCA_900170075.1_PMEN	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.02118	39.7	-	FWTI01	253	2146	1981	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545953	GCA_900170085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/085/GCA_900170085.1_Hermans-472	-	-
Staphylococcus aureus subsp. aureus	46170	PRJNA393756	393756	Terrabacteria group	Firmicutes	2.88168	32.6	-	NMWJ01	36	3007	2881	7/25/17	7/28/17	Scaffold	Chang Gung Memorial Hospital	SAMN07340928	GCA_002225275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/275/GCA_002225275.1_ASM222527v1	-	TW07_3
Salmonella enterica subsp. enterica serovar Typhimurium	90371	PRJNA287093	287093	Proteobacteria	Gammaproteobacteria	4.78979	52.1	-	LFGV01	442	4866	4928	7/24/15	7/24/15	Scaffold	University of Coimbra	SAMN03776136	GCA_001187325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/187/325/GCA_001187325.1_ASM118732v1	-	Sal199
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJEB2127	203935	Proteobacteria	Gammaproteobacteria	4.88098	51.8	-	CSTH01	67	4681	4609	3/24/15	6/13/15	Scaffold	SC	SAMEA786291	GCA_001213345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/345/GCA_001213345.1_4074_2_10	-	499208
Staphylococcus aureus subsp. aureus	46170	PRJNA393756	393756	Terrabacteria group	Firmicutes	2.87566	32.6	-	NMWK01	42	3021	2873	7/25/17	7/28/17	Scaffold	Chang Gung Memorial Hospital	SAMN07340927	GCA_002225295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/295/GCA_002225295.1_ASM222529v1	-	TW07_2
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.05075	39.5	-	FWTP01	286	2196	2018	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545962	GCA_900170095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/095/GCA_900170095.1_Hermans-1012	-	-
Streptococcus pneumoniae	1313	PRJEB10893	314860	Terrabacteria group	Firmicutes	2.14837	39.5	-	FWWA01	339	2305	2097	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545818	GCA_900170105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/105/GCA_900170105.1_PMEN	-	-
Staphylococcus aureus subsp. aureus	46170	PRJNA393756	393756	Terrabacteria group	Firmicutes	2.88085	32.6	-	NMWL01	36	3010	2881	7/25/17	7/28/17	Scaffold	Chang Gung Memorial Hospital	SAMN07340926	GCA_002225315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/315/GCA_002225315.1_ASM222531v1	-	TW07_1
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJEB2127	203935	Proteobacteria	Gammaproteobacteria	4.7	51.8	-	CSTI01	66	4638	4582	3/24/15	6/12/15	Scaffold	SC	SAMEA786295	GCA_001213485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/485/GCA_001213485.1_4074_2_11	-	51892776
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJEB2127	203935	Proteobacteria	Gammaproteobacteria	4.72061	51.9	-	CSTM01	136	4579	4519	3/24/15	6/14/15	Scaffold	SC	SAMEA786290	GCA_001213645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/213/645/GCA_001213645.1_4074_2_9	-	276608
Staphylococcus aureus subsp. aureus	46170	PRJNA393756	393756	Terrabacteria group	Firmicutes	2.87496	32.6	-	NMWN01	51	3001	2874	7/25/17	7/28/17	Scaffold	Chang Gung Memorial Hospital	SAMN07340924	GCA_002225335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/335/GCA_002225335.1_ASM222533v1	-	TW05
Streptococcus pneumoniae	1313	PRJEB10893	314860	Terrabacteria group	Firmicutes	2.18239	39.4	-	FWSN01	340	2332	2128	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545827	GCA_900170115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/115/GCA_900170115.1_PMEN	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.08025	39.7	-	FWUF01	277	2238	2049	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545899	GCA_900170125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/125/GCA_900170125.1_Hermans-121	-	-
Staphylococcus aureus subsp. aureus	46170	PRJNA393756	393756	Terrabacteria group	Firmicutes	2.92199	32.7	-	NMWM01	39	3075	2948	7/25/17	7/28/17	Scaffold	Chang Gung Memorial Hospital	SAMN07340925	GCA_002225345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/345/GCA_002225345.1_ASM222534v1	-	TW06
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.87743	51.9	-	CTBP01	199	4839	4780	3/24/15	6/14/15	Scaffold	SC	SAMEA773506	GCA_001214785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/214/785/GCA_001214785.1_5275_7_12	-	H23
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJEB2127	203935	Proteobacteria	Gammaproteobacteria	4.691	51.9	-	CTBG01	99	4587	4529	3/24/15	6/13/15	Scaffold	SC	SAMEA786296	GCA_001215185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/215/185/GCA_001215185.1_4074_2_12	-	653308
Staphylococcus aureus subsp. aureus	46170	PRJNA393756	393756	Terrabacteria group	Firmicutes	2.88466	32.7	-	NMWO01	55	3011	2882	7/25/17	7/28/17	Scaffold	Chang Gung Memorial Hospital	SAMN07340923	GCA_002225375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/375/GCA_002225375.1_ASM222537v1	-	TW04
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.03661	39.7	-	FWTK01	320	2166	1994	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545964	GCA_900170135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/135/GCA_900170135.1_Hermans-1017	-	-
Streptococcus pneumoniae	1313	PRJEB10893	314860	Terrabacteria group	Firmicutes	2.21457	39.4	-	FWTH01	383	2391	2164	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545816	GCA_900170145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/145/GCA_900170145.1_PMEN	-	-
Staphylococcus aureus subsp. aureus	46170	PRJNA393756	393756	Terrabacteria group	Firmicutes	2.88137	32.6	-	NMWP01	40	3008	2890	7/25/17	7/28/17	Scaffold	Chang Gung Memorial Hospital	SAMN07340922	GCA_002225395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/395/GCA_002225395.1_ASM222539v1	-	TW03
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104	85569	PRJEB2189	203850	Proteobacteria	Gammaproteobacteria	4.83975	51.9	-	CTGU01	166	4731	4675	3/26/15	6/13/15	Scaffold	SC	SAMEA773570	GCA_001222125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/222/125/GCA_001222125.1_5275_7_11	-	H22
Salmonella enterica subsp. enterica serovar Bovismorbificans	58097	PRJEB2127	203935	Proteobacteria	Gammaproteobacteria	4.76016	52.1	-	CGIA01	43	4554	4488	3/15/15	6/14/15	Scaffold	SC	SAMEA786300	GCA_001321645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/321/645/GCA_001321645.1_4074_2_6	-	A31126
Staphylococcus aureus subsp. aureus	46170	PRJNA393756	393756	Terrabacteria group	Firmicutes	2.88355	32.6	-	NMWQ01	40	3010	2886	7/25/17	7/28/17	Scaffold	Chang Gung Memorial Hospital	SAMN07340921	GCA_002225405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/405/GCA_002225405.1_ASM222540v1	-	TW02
Streptococcus pneumoniae	1313	PRJEB10893	314860	Terrabacteria group	Firmicutes	1.99648	39.7	-	FWTE01	245	2113	1949	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545831	GCA_900170155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/155/GCA_900170155.1_PMEN	-	-
Streptococcus pneumoniae	1313	PRJEB10893	314860	Terrabacteria group	Firmicutes	2.08794	39.6	-	FWSO01	284	2227	2030	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545829	GCA_900170165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/165/GCA_900170165.1_PMEN	-	-
Staphylococcus aureus subsp. aureus	46170	PRJNA393756	393756	Terrabacteria group	Firmicutes	2.88341	32.6	-	NMWR01	42	3014	2891	7/25/17	7/28/17	Scaffold	Chang Gung Memorial Hospital	SAMN07340920	GCA_002225435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/435/GCA_002225435.1_ASM222543v1	-	TW01_1
Staphylococcus aureus subsp. aureus	46170	PRJNA393756	393756	Terrabacteria group	Firmicutes	2.8837	32.6	-	NMWS01	47	3013	2886	7/25/17	7/28/17	Scaffold	Chang Gung Memorial Hospital	SAMN07340919	GCA_002225455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/225/455/GCA_002225455.1_ASM222545v1	-	TW01
Streptococcus pneumoniae	1313	PRJEB10893	314860	Terrabacteria group	Firmicutes	2.06771	39.6	-	FWTA01	243	2224	2026	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545835	GCA_900170175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/175/GCA_900170175.1_PMEN	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.02756	39.7	-	FWTL01	198	2178	1996	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545898	GCA_900170185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/185/GCA_900170185.1_Hermans-278	-	-
Staphylococcus aureus	1280	PRJNA403939	403939	Terrabacteria group	Firmicutes	2.71553	32.8	-	NTMC01	49	2798	2629	9/17/17	9/19/17	Scaffold	Zhejiang University	SAMN07626547	GCA_002307435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/307/435/GCA_002307435.1_ASM230743v1	-	FY20
Staphylococcus aureus	1280	PRJNA403939	403939	Terrabacteria group	Firmicutes	2.71689	32.8	-	NXFU01	69	2821	2658	10/2/17	10/2/17	Scaffold	Zhejiang University	SAMN07701650	GCA_002407225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/407/225/GCA_002407225.1_ASM240722v1	-	FY22
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.07459	39.5	-	FWUG01	312	2197	2002	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545963	GCA_900170195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/195/GCA_900170195.1_Hermans-1016	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.1095	39.6	-	FWTX01	291	2249	2054	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545906	GCA_900170205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/205/GCA_900170205.1_Hermans-280	-	-
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87713	32.7	-	FGHO01	53	2999	2840	2/10/16	3/5/17	Scaffold	SC	SAMEA1464243	GCA_900017555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/555/GCA_900017555.1_7564_8_9	-	st995
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.88651	32.7	-	FGXG01	94	3008	2837	2/10/16	3/5/17	Scaffold	SC	SAMEA1469566	GCA_900017625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/017/625/GCA_900017625.1_7480_8_81	-	st2494
Streptococcus pneumoniae	1313	PRJEB10893	314860	Terrabacteria group	Firmicutes	2.11531	39.7	-	FWSV01	340	2282	2081	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545838	GCA_900170215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/215/GCA_900170215.1_PMEN	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.0831	39.6	-	FWUA01	294	2254	2055	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545985	GCA_900170225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/225/GCA_900170225.1_Hermans-1646	-	-
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78594	32.7	-	FGKP01	76	2856	2718	2/10/16	3/5/17	Scaffold	SC	SAMEA1469638	GCA_900018245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/018/245/GCA_900018245.1_7480_7_82	-	st1320
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.87626	32.7	-	FFOU01	82	3008	2846	2/9/16	3/5/17	Scaffold	SC	SAMEA1469556	GCA_900020205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/205/GCA_900020205.1_7480_8_37	-	st2307
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.14019	39.6	-	FWUH01	331	2307	2098	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545965	GCA_900170235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/235/GCA_900170235.1_Hermans-1018	-	-
Streptococcus pneumoniae	1313	PRJEB10893	314860	Terrabacteria group	Firmicutes	2.19178	39.4	-	FWTC01	363	2366	2137	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545836	GCA_900170245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/245/GCA_900170245.1_PMEN	-	-
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.74157	32.7	-	FGGW01	51	2806	2668	2/10/16	3/5/17	Scaffold	SC	SAMEA1317377	GCA_900020345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/345/GCA_900020345.1_7414_8_77	-	st935
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82748	32.7	-	FGJP01	59	2927	2780	2/10/16	3/6/17	Scaffold	SC	SAMEA1469614	GCA_900020395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/020/395/GCA_900020395.1_7480_7_42	-	st1221
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.01272	39.6	-	FWUE01	236	2153	1962	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545856	GCA_900170255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/255/GCA_900170255.1_Hermans-1342	-	-
Streptococcus pneumoniae	1313	PRJEB10893	314860	Terrabacteria group	Firmicutes	2.16568	39.5	-	FWSM01	341	2297	2079	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545825	GCA_900170265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/265/GCA_900170265.1_PMEN	-	-
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.9091	32.7	-	FGBB01	67	3074	2883	2/10/16	3/5/17	Scaffold	SC	SAMEA1464354	GCA_900022585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/022/585/GCA_900022585.1_7712_8_3	-	st648
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83349	32.7	-	FFXK01	49	2922	2783	2/10/16	3/5/17	Scaffold	SC	SAMEA1464559	GCA_900025005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/025/005/GCA_900025005.1_7554_6_65	-	st269
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.05151	39.6	-	FWTD01	246	2205	2016	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545918	GCA_900170275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/275/GCA_900170275.1_Hermans-818	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.11216	39.5	-	FWTY01	310	2238	2051	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545884	GCA_900170285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/285/GCA_900170285.1_Hermans-1652	-	-
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83226	32.7	-	FFWU01	55	2927	2777	2/10/16	3/5/17	Scaffold	SC	SAMEA1464720	GCA_900035705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/705/GCA_900035705.1_7554_6_37	-	st193
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86608	32.7	-	FGET01	54	3006	2823	2/10/16	3/5/17	Scaffold	SC	SAMEA1317417	GCA_900037705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/705/GCA_900037705.1_7414_8_6	-	st512
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.1003	39.6	-	FWTW01	287	2221	2042	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545857	GCA_900170295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/295/GCA_900170295.1_Hermans-716	-	-
Streptococcus pneumoniae	1313	PRJEB10893	314860	Terrabacteria group	Firmicutes	2.08156	39.6	-	FWTB01	268	2243	2060	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545830	GCA_900170305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/305/GCA_900170305.1_PMEN	-	-
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86102	32.7	-	FGHE01	78	2952	2794	2/10/16	3/5/17	Scaffold	SC	SAMEA1317571	GCA_900037805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/805/GCA_900037805.1_7414_8_90	-	st966
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.74861	32.7	-	FGJD01	60	2814	2669	2/10/16	3/5/17	Scaffold	SC	SAMEA1469536	GCA_900037925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/037/925/GCA_900037925.1_7480_7_24	-	st1165
Streptococcus pneumoniae	1313	PRJEB10893	314860	Terrabacteria group	Firmicutes	2.19591	39.5	-	FWSY01	336	2331	2139	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545837	GCA_900170325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/325/GCA_900170325.1_PMEN	-	-
Streptococcus pneumoniae	1313	PRJEB10893	314860	Terrabacteria group	Firmicutes	2.06054	39.5	-	FWTJ01	259	2192	2006	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545832	GCA_900170335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/335/GCA_900170335.1_PMEN	-	-
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.95994	32.7	-	FGCI01	54	3136	2936	2/10/16	3/5/17	Scaffold	SC	SAMEA1464188	GCA_900038415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/415/GCA_900038415.1_7748_6_11	-	st773
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82665	32.7	-	FFZZ01	62	2945	2780	2/10/16	3/6/17	Scaffold	SC	SAMEA1317586	GCA_900038775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/775/GCA_900038775.1_7414_8_13	-	st528
Streptococcus pneumoniae	1313	PRJEB10893	314860	Terrabacteria group	Firmicutes	2.11363	39.4	-	FWSQ01	346	2242	2047	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545824	GCA_900170345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/345/GCA_900170345.1_PMEN	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.1185	39.5	-	FWTS01	327	2304	2091	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545984	GCA_900170355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/355/GCA_900170355.1_Hermans-1640	-	-
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82673	32.7	-	FGGH01	66	2926	2768	2/10/16	3/5/17	Scaffold	SC	SAMEA1317345	GCA_900038905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/038/905/GCA_900038905.1_7414_8_52	-	st877
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.96609	32.6	-	FGKL01	76	3116	2929	2/10/16	3/5/17	Scaffold	SC	SAMEA1469593	GCA_900039015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/015/GCA_900039015.1_7480_7_78	-	st1310
Streptococcus pneumoniae	1313	PRJEB10893	314860	Terrabacteria group	Firmicutes	2.10861	39.6	-	FWTF01	352	2290	2074	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545834	GCA_900170365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/365/GCA_900170365.1_PMEN	-	-
Streptococcus pneumoniae	1313	PRJEB10893	314860	Terrabacteria group	Firmicutes	2.09742	39.5	-	FWSS01	342	2226	2037	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545821	GCA_900170375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/375/GCA_900170375.1_PMEN	-	-
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79683	32.7	-	FGJX01	68	2883	2745	2/10/16	3/6/17	Scaffold	SC	SAMEA1469707	GCA_900039735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/039/735/GCA_900039735.1_7480_7_53	-	st1257
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81948	32.7	-	FGKF01	80	2911	2754	2/10/16	3/5/17	Scaffold	SC	SAMEA1469612	GCA_900040155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/155/GCA_900040155.1_7480_7_69	-	st1291
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.07798	39.6	-	FWTV01	303	2228	2033	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545926	GCA_900170385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/385/GCA_900170385.1_Hermans-847	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.15248	39.6	-	FWUD01	570	2434	2102	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545850	GCA_900170395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/395/GCA_900170395.1_Hermans-70	-	-
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.7923	32.7	-	FGLG01	50	2877	2725	2/10/16	3/5/17	Scaffold	SC	SAMEA1464360	GCA_900040245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/245/GCA_900040245.1_7521_5_61	-	st1387
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83756	32.7	-	FGRY01	57	2939	2785	2/10/16	3/6/17	Scaffold	SC	SAMEA1464706	GCA_900040455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/455/GCA_900040455.1_7521_6_64	-	st1663
Streptococcus pneumoniae	1313	PRJEB10893	314860	Terrabacteria group	Firmicutes	2.20978	39.4	-	FWSP01	372	2377	2152	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545817	GCA_900170405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/405/GCA_900170405.1_PMEN	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.07065	39.5	-	FWUC01	317	2198	1983	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545870	GCA_900170425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/425/GCA_900170425.1_Hermans-718	-	-
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80536	32.7	-	FGRD01	47	2899	2748	2/10/16	3/5/17	Scaffold	SC	SAMEA1464614	GCA_900040995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/040/995/GCA_900040995.1_7521_5_73	-	st1432
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.6988	32.8	-	FGOS01	16	2767	2616	2/10/16	3/5/17	Scaffold	SC	SAMEA1464184	GCA_900041895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/041/895/GCA_900041895.1_7748_6_6	-	st424
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.05521	39.6	-	FWTM01	288	2172	1986	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545934	GCA_900170435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/435/GCA_900170435.1_Hermans-889	-	-
Streptococcus pneumoniae	1313	PRJEB10893	314860	Terrabacteria group	Firmicutes	2.04827	39.6	-	FWTG01	272	2169	1973	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545840	GCA_900170445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/445/GCA_900170445.1_PMEN	-	-
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8151	32.7	-	FFPD01	58	2930	2761	2/9/16	3/5/17	Scaffold	SC	SAMEA1464566	GCA_900043565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/565/GCA_900043565.1_7564_8_21	-	st2827
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80301	32.7	-	FFUZ01	42	2895	2746	2/10/16	3/5/17	Scaffold	SC	SAMEA1317475	GCA_900043915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/915/GCA_900043915.1_7414_7_24	-	st67
Streptococcus pneumoniae	1313	PRJEB10893	314860	Terrabacteria group	Firmicutes	2.08999	39.6	-	FWTQ01	287	2231	2027	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545833	GCA_900170455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/455/GCA_900170455.1_PMEN	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.03339	39.6	-	FWTT01	255	2193	1998	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545937	GCA_900170465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/465/GCA_900170465.1_Hermans-469	-	-
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81805	32.7	-	FFPM01	49	2911	2761	2/9/16	3/5/17	Scaffold	SC	SAMEA1464708	GCA_900044775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/775/GCA_900044775.1_7521_6_87	-	st1725
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82845	32.7	-	FGOE01	53	2925	2774	2/10/16	3/6/17	Scaffold	SC	SAMEA1464228	GCA_900045085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/085/GCA_900045085.1_7521_6_69	-	st1670
Streptococcus pneumoniae	1313	PRJEB10893	314860	Terrabacteria group	Firmicutes	2.10739	39.5	-	FWST01	289	2214	2025	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545828	GCA_900170475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/475/GCA_900170475.1_PMEN	-	-
Streptococcus pneumoniae	1313	PRJEB10893	314860	Terrabacteria group	Firmicutes	2.11583	39.7	-	FWSW01	326	2279	2080	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545839	GCA_900170485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/485/GCA_900170485.1_PMEN	-	-
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80495	32.7	-	FGRS01	44	2923	2740	2/10/16	3/5/17	Scaffold	SC	SAMEA1464478	GCA_900045145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/145/GCA_900045145.1_7521_6_38	-	st1589
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85873	32.7	-	FGXZ01	56	2964	2817	2/10/16	3/5/17	Scaffold	SC	SAMEA1464613	GCA_900045275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/275/GCA_900045275.1_7748_6_50	-	st2640
Streptococcus pneumoniae	1313	PRJEB10893	314860	Terrabacteria group	Firmicutes	2.05556	39.8	-	FWSR01	314	2209	2012	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545823	GCA_900170495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/495/GCA_900170495.1_PMEN	-	-
Streptococcus pneumoniae	1313	PRJEB10893	314860	Terrabacteria group	Firmicutes	2.20264	39.4	-	FWSX01	342	2390	2143	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545819	GCA_900170505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/505/GCA_900170505.1_PMEN	-	-
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83226	32.7	-	FFVI01	60	2932	2777	2/10/16	3/5/17	Scaffold	SC	SAMEA1317585	GCA_900045505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/505/GCA_900045505.1_7414_7_26	-	st69
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77645	32.8	-	FFZB01	22	2878	2709	2/10/16	3/5/17	Scaffold	SC	SAMEA1317548	GCA_900045785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/785/GCA_900045785.1_7414_7_76	-	st436
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.03955	39.6	-	FWTR01	268	2188	1998	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545860	GCA_900170515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/515/GCA_900170515.1_Hermans-1277	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.10842	39.6	-	FWWE01	314	2244	2041	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545880	GCA_900170525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/525/GCA_900170525.1_Hermans-930	-	-
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81331	32.7	-	FFZW01	56	2915	2760	2/10/16	3/6/17	Scaffold	SC	SAMEA1317454	GCA_900045825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/825/GCA_900045825.1_7414_8_8	-	st516
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80069	32.7	-	FGTE01	52	2890	2748	2/10/16	3/5/17	Scaffold	SC	SAMEA1317387	GCA_900046195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/195/GCA_900046195.1_7469_7_24	-	st1825
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.12494	39.7	-	FWUS01	350	2297	2081	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545930	GCA_900170545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/545/GCA_900170545.1_Hermans-313	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.05118	39.7	-	FWUR01	285	2210	1999	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545938	GCA_900170555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/555/GCA_900170555.1_Hermans-337	-	-
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.91843	32.7	-	FGTG01	110	3138	2963	2/10/16	3/6/17	Scaffold	SC	SAMEA1317591	GCA_900046205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/205/GCA_900046205.1_7469_7_27	-	st1831
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83175	32.8	-	FGVD01	62	2929	2774	2/10/16	3/5/17	Scaffold	SC	SAMEA1469540	GCA_900046415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/415/GCA_900046415.1_7480_8_3	-	st2190
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.15008	39.6	-	FWVO01	344	2310	2093	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545961	GCA_900170565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/565/GCA_900170565.1_Hermans-1682	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.14184	39.6	-	FWUI01	351	2242	1989	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545942	GCA_900170575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/575/GCA_900170575.1_Hermans-894	-	-
Staphylococcus aureus	1280	PRJEB12461	312074	Terrabacteria group	Firmicutes	2.68126	32.7	-	FCOV01	24	2757	2561	2/16/16	3/5/17	Scaffold	UNIVERSITE CLERMONT AUVERGNE	SAMEA3855898	GCA_900046465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/465/GCA_900046465.1_LYO-S2	-	-
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.79147	32.7	-	FGQC01	23	2890	2719	2/10/16	3/6/17	Scaffold	SC	SAMEA1464693	GCA_900046875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/875/GCA_900046875.1_8728_5_26	-	st1008
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.07211	39.6	-	FWVH01	287	2192	1999	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545846	GCA_900170585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/585/GCA_900170585.1_Hermans-484	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.06548	39.7	-	FWUT01	335	2176	1992	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545866	GCA_900170595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/595/GCA_900170595.1_Hermans-1359	-	-
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.96679	32.6	-	FGAF01	61	3116	2934	2/10/16	3/6/17	Scaffold	SC	SAMEA1317524	GCA_900047225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/047/225/GCA_900047225.1_7414_8_23	-	st556
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83075	32.7	-	FGXA01	81	2932	2780	2/10/16	3/5/17	Scaffold	SC	SAMEA1469640	GCA_900048365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/365/GCA_900048365.1_7480_8_72	-	st2471
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.12649	39.6	-	FWVY01	377	2270	2061	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545978	GCA_900170605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/605/GCA_900170605.1_Hermans-1530	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.0768	39.6	-	FWVG01	253	2256	2062	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545886	GCA_900170615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/615/GCA_900170615.1_Hermans-1655	-	-
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82538	32.7	-	FGEF01	44	2913	2772	2/10/16	3/5/17	Scaffold	SC	SAMEA1464197	GCA_900048455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/455/GCA_900048455.1_7554_6_90	-	st333
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81528	32.7	-	FGGM01	90	2939	2784	2/10/16	3/5/17	Scaffold	SC	SAMEA1317588	GCA_900048655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/655/GCA_900048655.1_7414_8_63	-	st904
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.13341	39.7	-	FWVW01	261	2225	1977	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545908	GCA_900170625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/625/GCA_900170625.1_Hermans-35	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.0873	39.4	-	FWVT01	302	2230	2033	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545848	GCA_900170635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/635/GCA_900170635.1_Hermans-368	-	-
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82888	32.6	-	FGGR01	85	2911	2758	2/10/16	3/5/17	Scaffold	SC	SAMEA1317374	GCA_900048685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/685/GCA_900048685.1_7414_8_71	-	st925
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82369	32.7	-	FGGY01	50	2936	2788	2/10/16	3/5/17	Scaffold	SC	SAMEA1317457	GCA_900048735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/735/GCA_900048735.1_7414_8_83	-	st952
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.0438	39.5	-	FWVS01	217	2205	2009	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545890	GCA_900170645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/645/GCA_900170645.1_Hermans-16	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.13383	39.7	-	FWVF01	262	2222	1981	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545900	GCA_900170655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/655/GCA_900170655.1_Hermans-33	-	-
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.76789	32.7	-	FGZQ01	49	2866	2719	2/10/16	3/5/17	Scaffold	SC	SAMEA1464653	GCA_900048975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/048/975/GCA_900048975.1_7564_8_49	-	st2956
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.86846	32.7	-	FHAA01	103	2999	2814	2/10/16	3/5/17	Scaffold	SC	SAMEA1464487	GCA_900050255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/255/GCA_900050255.1_7564_8_64	-	st3068
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.09685	39.6	-	FWUU01	292	2261	2071	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545841	GCA_900170665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/665/GCA_900170665.1_Hermans-907	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.0272	39.6	-	FWUZ01	257	2165	1964	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545872	GCA_900170675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/675/GCA_900170675.1_Hermans-491	-	-
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79783	32.7	-	FGZW01	63	2929	2757	2/10/16	3/6/17	Scaffold	SC	SAMEA1464258	GCA_900050585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/585/GCA_900050585.1_7564_8_55	-	st3004
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.82797	32.7	-	FGZF01	76	2934	2771	2/10/16	3/6/17	Scaffold	SC	SAMEA1464318	GCA_900051055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/051/055/GCA_900051055.1_7564_8_29	-	st2886
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.05571	39.6	-	FWUY01	283	2199	2029	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545959	GCA_900170685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/685/GCA_900170685.1_Hermans-1379	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.13668	39.7	-	FWWB01	371	2278	2088	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545876	GCA_900170695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/695/GCA_900170695.1_Hermans-110	-	-
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.84114	32.7	-	FGYX01	106	2938	2770	2/10/16	3/5/17	Scaffold	SC	SAMEA1464659	GCA_900052955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/955/GCA_900052955.1_7564_8_19	-	st2823
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.8527	32.7	-	FHCZ01	67	2968	2816	2/10/16	3/5/17	Scaffold	SC	SAMEA1317442	GCA_900055295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/295/GCA_900055295.1_7469_7_84	-	st2135
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.15956	39.6	-	FWUK01	382	2323	2145	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545883	GCA_900170705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/705/GCA_900170705.1_Hermans-721	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.06607	39.6	-	FWTZ01	299	2195	2018	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545924	GCA_900170715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/715/GCA_900170715.1_Hermans-47	-	-
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79423	32.7	-	FHAR01	71	2885	2741	2/10/16	3/5/17	Scaffold	SC	SAMEA1464463	GCA_900056275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/275/GCA_900056275.1_7564_8_89	-	st3265
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.85876	32.7	-	FHCJ01	65	2981	2824	2/10/16	3/5/17	Scaffold	SC	SAMEA1317517	GCA_900056295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/295/GCA_900056295.1_7469_7_15	-	st1800
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.14686	39.5	-	FWWC01	348	2303	2111	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545976	GCA_900170735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/735/GCA_900170735.1_Hermans-1475	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.09872	39.6	-	FXYK01	404	2270	2057	6/2/17	6/12/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545904	GCA_900170745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/745/GCA_900170745.1_Hermans-565	-	-
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.83543	32.7	-	FHEC01	54	2932	2784	2/10/16	3/5/17	Scaffold	SC	SAMEA1464598	GCA_900056685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/056/685/GCA_900056685.1_7748_6_66	-	st2756
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.77704	32.8	-	FHEP01	272	2943	2677	2/10/16	3/5/17	Scaffold	SC	SAMEA1464353	GCA_900058385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/385/GCA_900058385.1_7564_8_27	-	st2881
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.11553	39.5	-	FWVI01	333	2258	2057	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545892	GCA_900170755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/755/GCA_900170755.1_Hermans-1668	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.12966	39.5	-	FWWD01	325	2239	2044	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545901	GCA_900170765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/765/GCA_900170765.1_Hermans-934	-	-
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78545	32.7	-	FHBX01	32	2872	2730	2/10/16	3/5/17	Scaffold	SC	SAMEA1464387	GCA_900058875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/058/875/GCA_900058875.1_7521_6_24	-	st1531
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.78635	32.7	-	FHEL01	56	2886	2741	2/10/16	3/5/17	Scaffold	SC	SAMEA1464362	GCA_900060045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/045/GCA_900060045.1_7564_8_24	-	st2874
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.20901	39.5	-	FWUQ01	386	2391	2181	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545966	GCA_900170775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/775/GCA_900170775.1_Hermans-1020	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.00699	39.7	-	FWVN01	263	2179	1981	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545907	GCA_900170785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/785/GCA_900170785.1_Hermans-168	-	-
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.79029	32.7	-	FHDR01	46	2886	2737	2/10/16	3/5/17	Scaffold	SC	SAMEA1469622	GCA_900061105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/061/105/GCA_900061105.1_7480_8_67	-	st2456
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.878	32.7	-	FHCS01	68	2997	2842	2/10/16	3/5/17	Scaffold	SC	SAMEA1317558	GCA_900062805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/062/805/GCA_900062805.1_7469_7_58	-	st1988
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.12977	39.7	-	FWUO01	272	2206	1957	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545895	GCA_900170795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/795/GCA_900170795.1_Hermans-722	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.08424	39.7	-	FWVX01	341	2265	2052	5/18/17	5/24/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545954	GCA_900170805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/805/GCA_900170805.1_Hermans-364	-	-
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.80256	32.7	-	FHBF01	61	2904	2752	2/10/16	3/6/17	Scaffold	SC	SAMEA1317497	GCA_900063335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/063/335/GCA_900063335.1_7414_8_76	-	st933
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.81854	32.7	-	FHDE01	103	2939	2787	2/10/16	3/5/17	Scaffold	SC	SAMEA1469597	GCA_900064435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/435/GCA_900064435.1_7480_8_13	-	st2206
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.06708	39.6	-	FWUP01	294	2174	2007	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545854	GCA_900170815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/815/GCA_900170815.1_Hermans-911	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.08478	39.7	-	FWVE01	333	2254	2038	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545946	GCA_900170825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/825/GCA_900170825.1_Hermans-345	-	-
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.90903	32.6	-	FHBH01	69	3047	2868	2/10/16	3/6/17	Scaffold	SC	SAMEA1317470	GCA_900064545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/064/545/GCA_900064545.1_7414_8_94	-	st975
Staphylococcus aureus	1280	PRJEB12734	312330	Terrabacteria group	Firmicutes	3.01714	32.6	-	FJMW01	40	3179	3028	2/25/16	3/5/17	Scaffold	SC	SAMEA3871514	GCA_900067275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/067/275/GCA_900067275.1_NeoTW8	-	TW20
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.09135	39.7	-	FWUV01	345	2230	2032	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545891	GCA_900170835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/835/GCA_900170835.1_Hermans-1663	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.06442	39.6	-	FWVL01	266	2190	2011	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545843	GCA_900170845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/845/GCA_900170845.1_Hermans-1090	-	-
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.74853	32.8	-	FJNV01	32	2859	2659	2/27/16	3/5/17	Scaffold	SC	SAMEA2298603	GCA_900070215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/070/215/GCA_900070215.1_12162_2_94	-	1943STDY5698363
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.73603	32.7	-	FJNR01	31	2800	2654	2/27/16	3/5/17	Scaffold	SC	SAMEA2298604	GCA_900070265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/070/265/GCA_900070265.1_12162_2_95	-	1943STDY5698364
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.12698	39.7	-	FWVA01	490	2287	2065	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545974	GCA_900170855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/855/GCA_900170855.1_Hermans-1399	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.07294	39.5	-	FWUL01	321	2192	2007	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545845	GCA_900170865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/865/GCA_900170865.1_Hermans-1075	-	-
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.71858	32.8	-	FJNO01	14	2822	2642	2/27/16	3/5/17	Scaffold	SC	SAMEA2298602	GCA_900070275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/070/275/GCA_900070275.1_12162_2_93	-	1943STDY5698362
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.72098	32.7	-	FKLV01	18	2840	2678	5/18/16	3/6/17	Scaffold	SC	SAMEA2236442	GCA_900080255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/255/GCA_900080255.1_11641_1_40	-	NA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.03153	39.6	-	FWUW01	241	2191	1993	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545885	GCA_900170875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/875/GCA_900170875.1_Hermans-542	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.01487	39.7	-	FWVM01	230	2151	1965	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545927	GCA_900170885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/885/GCA_900170885.1_Hermans-740	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.85098	32.8	-	FKLY01	39	3011	2821	5/18/16	3/6/17	Scaffold	SC	SAMEA2236446	GCA_900080265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/265/GCA_900080265.1_11641_1_45	-	NA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.8109	32.7	-	FKMZ01	39	2944	2764	5/18/16	3/6/17	Scaffold	SC	SAMEA2236465	GCA_900080275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/275/GCA_900080275.1_11641_1_64	-	NA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.12114	39.6	-	FWVZ01	351	2281	2070	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545852	GCA_900170895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/895/GCA_900170895.1_Hermans-1107	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.07051	39.6	-	FWVQ01	331	2171	1990	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545977	GCA_900170905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/905/GCA_900170905.1_Hermans-1505	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.76607	32.7	-	FKNK01	20	2851	2718	5/18/16	3/6/17	Scaffold	SC	SAMEA2236417	GCA_900080285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/285/GCA_900080285.1_11641_1_14	-	NA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.83902	32.8	-	FKLZ01	35	2983	2803	5/18/16	3/6/17	Scaffold	SC	SAMEA2236468	GCA_900080295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/295/GCA_900080295.1_11641_1_67	-	NA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.12293	39.5	-	FWVV01	293	2293	2105	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545919	GCA_900170915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/915/GCA_900170915.1_Hermans-732	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.0607	39.6	-	FWVC01	319	2162	1986	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545867	GCA_900170925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/925/GCA_900170925.1_Hermans-926	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.71841	32.7	-	FKMK01	13	2830	2663	5/18/16	3/6/17	Scaffold	SC	SAMEA2236452	GCA_900080305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/305/GCA_900080305.1_11641_1_51	-	NA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.70424	32.8	-	FKMJ01	27	2804	2620	5/18/16	3/6/17	Scaffold	SC	SAMEA2236426	GCA_900080315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/315/GCA_900080315.1_11641_1_23	-	NA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.11793	39.7	-	FWVU01	355	2290	2098	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545932	GCA_900170935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/935/GCA_900170935.1_Hermans-54	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.11136	39.7	-	FWUX01	368	2285	2084	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545859	GCA_900170945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/945/GCA_900170945.1_Hermans-486	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.91749	32.7	-	FKMX01	44	3066	2921	5/18/16	3/6/17	Scaffold	SC	SAMEA2236418	GCA_900080325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/325/GCA_900080325.1_11641_1_15	-	NA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.736	32.7	-	FKLX01	18	2861	2688	5/18/16	3/6/17	Scaffold	SC	SAMEA2236427	GCA_900080335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/335/GCA_900080335.1_11641_1_24	-	NA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.08868	39.6	-	FWVD01	309	2226	2022	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545847	GCA_900170955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/955/GCA_900170955.1_Hermans-1083	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.0554	39.5	-	FWVK01	239	2201	2008	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545911	GCA_900170965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/965/GCA_900170965.1_Hermans-726	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.91012	32.7	-	FKMW01	39	3059	2915	5/18/16	3/6/17	Scaffold	SC	SAMEA2236435	GCA_900080345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/345/GCA_900080345.1_11641_1_33	-	NA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.66176	32.7	-	FKMG01	16	2747	2592	5/18/16	3/6/17	Scaffold	SC	SAMEA2236459	GCA_900080355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/355/GCA_900080355.1_11641_1_58	-	NA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.10468	39.6	-	FWVR01	293	2258	2065	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545896	GCA_900170975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/975/GCA_900170975.1_Hermans-563	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.09286	39.6	-	FWUN01	320	2244	2032	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545967	GCA_900170985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/985/GCA_900170985.1_Hermans-1022	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.72681	32.9	-	FKMU01	17	2830	2668	5/18/16	3/6/17	Scaffold	SC	SAMEA2236444	GCA_900080365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/365/GCA_900080365.1_11641_1_42	-	NA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.84504	32.7	-	FKMQ01	25	2954	2840	5/18/16	3/6/17	Scaffold	SC	SAMEA2236440	GCA_900080375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/375/GCA_900080375.1_11641_1_38	-	NA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.11735	39.7	-	FWUM01	367	2266	2066	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545882	GCA_900170995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/170/995/GCA_900170995.1_Hermans-1656	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.11156	39.6	-	FWVP01	319	2248	2044	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545909	GCA_900171005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/005/GCA_900171005.1_Hermans-937	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.73802	32.8	-	FKMD01	19	2816	2695	5/18/16	3/6/17	Scaffold	SC	SAMEA2236407	GCA_900080385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/385/GCA_900080385.1_11641_1_3	-	NA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.78065	32.8	-	FKNJ01	18	2919	2765	5/18/16	3/6/17	Scaffold	SC	SAMEA2236430	GCA_900080395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/395/GCA_900080395.1_11641_1_27	-	NA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.10622	39.5	-	FWQB01	317	2226	2039	4/26/17	5/6/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545958	GCA_900171025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/025/GCA_900171025.1_Hermans-1118	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.01357	39.7	-	FWRP01	245	2178	1979	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545869	GCA_900171035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/035/GCA_900171035.1_Hermans-1558	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.86705	32.7	-	FKNC01	20	2995	2864	5/18/16	3/6/17	Scaffold	SC	SAMEA2236439	GCA_900080405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/405/GCA_900080405.1_11641_1_37	-	NA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.68792	32.8	-	FKYG01	8	2778	2604	5/18/16	3/6/17	Scaffold	SC	SAMEA2236437	GCA_900080415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/415/GCA_900080415.1_11641_1_35	-	NA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.17004	39.5	-	FWQN01	320	2338	2131	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545969	GCA_900171045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/045/GCA_900171045.1_Hermans-1134	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.0322	39.7	-	FWQH01	256	2164	1984	4/26/17	5/6/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545871	GCA_900171055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/055/GCA_900171055.1_Hermans-1542	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.74655	32.8	-	FKNI01	23	2881	2732	5/18/16	3/6/17	Scaffold	SC	SAMEA2236470	GCA_900080425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/425/GCA_900080425.1_11641_1_69	-	NA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.71496	32.7	-	FKLW01	11	2853	2684	5/18/16	3/6/17	Scaffold	SC	SAMEA2236425	GCA_900080435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/435/GCA_900080435.1_11641_1_22	-	NA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.0256	39.7	-	FWRK01	228	2190	2005	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545944	GCA_900171065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/065/GCA_900171065.1_Hermans-650	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.03154	39.6	-	FWRE01	243	2184	1996	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545889	GCA_900171075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/075/GCA_900171075.1_Hermans-113	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.74597	32.8	-	FKMH01	21	2923	2744	5/18/16	3/6/17	Scaffold	SC	SAMEA2236419	GCA_900080445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/445/GCA_900080445.1_11641_1_16	-	NA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.81243	32.7	-	FKNG01	21	2908	2785	5/18/16	3/6/17	Scaffold	SC	SAMEA2236472	GCA_900080455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/455/GCA_900080455.1_11641_1_71	-	NA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.09091	39.7	-	FWQY01	317	2253	2041	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545939	GCA_900171085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/085/GCA_900171085.1_Hermans-192	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.16128	39.6	-	FWRB01	339	2300	2094	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545931	GCA_900171095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/095/GCA_900171095.1_Hermans-188	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.80608	32.7	-	FKMF01	36	2948	2762	5/18/16	3/6/17	Scaffold	SC	SAMEA2236473	GCA_900080465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/465/GCA_900080465.1_11641_1_72	-	NA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.73029	32.7	-	FKMI01	18	2856	2692	5/18/16	3/6/17	Scaffold	SC	SAMEA2236447	GCA_900080475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/475/GCA_900080475.1_11641_1_46	-	NA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.06799	39.6	-	FWQO01	318	2198	2010	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545864	GCA_900171105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/105/GCA_900171105.1_Hermans-7	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.10561	39.6	-	FWRA01	304	2231	2041	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545873	GCA_900171115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/115/GCA_900171115.1_Hermans-1554	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.79902	32.9	-	FKMA01	15	2945	2799	5/18/16	3/6/17	Scaffold	SC	SAMEA2236443	GCA_900080485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/485/GCA_900080485.1_11641_1_41	-	NA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.85407	32.8	-	FKOX01	38	2996	2822	5/18/16	3/6/17	Scaffold	SC	SAMEA2236428	GCA_900080495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/495/GCA_900080495.1_11641_1_25	-	NA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.10053	39.7	-	FWQF01	361	2269	2053	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545912	GCA_900171125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/125/GCA_900171125.1_Hermans-607	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.08393	39.6	-	FWQM01	309	2208	2009	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545878	GCA_900171135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/135/GCA_900171135.1_Hermans-1591	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.72239	32.7	-	FKMY01	14	2858	2689	5/18/16	3/6/17	Scaffold	SC	SAMEA2236423	GCA_900080505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/505/GCA_900080505.1_11641_1_20	-	NA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.75996	32.8	-	FKMP01	16	2887	2770	5/18/16	3/6/17	Scaffold	SC	SAMEA2236464	GCA_900080515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/515/GCA_900080515.1_11641_1_63	-	NA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.181	39.6	-	FWQP01	361	2355	2152	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545897	GCA_900171145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/145/GCA_900171145.1_Hermans-435	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.14872	39.5	-	FWRD01	339	2303	2101	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545916	GCA_900171155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/155/GCA_900171155.1_Hermans-43	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.8292	32.8	-	FKND01	25	2959	2831	5/18/16	3/6/17	Scaffold	SC	SAMEA2236467	GCA_900080525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/525/GCA_900080525.1_11641_1_66	-	NA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.79616	32.8	-	FKMS01	30	2912	2778	5/18/16	3/6/17	Scaffold	SC	SAMEA2236436	GCA_900080535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/535/GCA_900080535.1_11641_1_34	-	NA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.23004	39.4	-	FXLL01	376	2441	2231	4/26/17	5/6/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545917	GCA_900171165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/165/GCA_900171165.1_Hermans-939	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.1166	39.7	-	FWQV01	351	2245	2048	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545855	GCA_900171175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/175/GCA_900171175.1_Hermans-789	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.71701	32.7	-	FKNB01	17	2771	2658	5/18/16	3/6/17	Scaffold	SC	SAMEA2236409	GCA_900080545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/545/GCA_900080545.1_11641_1_5	-	NA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.7371	32.8	-	FKNA01	12	2833	2675	5/18/16	3/6/17	Scaffold	SC	SAMEA2236434	GCA_900080555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/555/GCA_900080555.1_11641_1_32	-	NA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.09421	39.6	-	FWQJ01	307	2228	2036	4/26/17	5/6/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545923	GCA_900171185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/185/GCA_900171185.1_Hermans-178	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.14094	39.6	-	FWRH01	329	2321	2097	4/5/17	6/10/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545960	GCA_900171195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/195/GCA_900171195.1_Hermans-1620	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.88606	32.8	-	FKMB01	29	3038	2909	5/18/16	3/6/17	Scaffold	SC	SAMEA2236431	GCA_900080565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/565/GCA_900080565.1_11641_1_28	-	NA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.79467	32.7	-	FKME01	19	2943	2787	5/18/16	3/6/17	Scaffold	SC	SAMEA2236466	GCA_900080575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/575/GCA_900080575.1_11641_1_65	-	NA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.08756	39.6	-	FWRJ01	330	2225	2025	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545980	GCA_900171205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/205/GCA_900171205.1_Hermans-1629	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.13944	39.6	-	FWQE01	306	2293	2084	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545842	GCA_900171215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/215/GCA_900171215.1_Hermans-784	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.7342	32.7	-	FKMT01	14	2847	2689	5/18/16	3/6/17	Scaffold	SC	SAMEA2236469	GCA_900080585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/585/GCA_900080585.1_11641_1_68	-	NA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.65792	32.7	-	FKMV01	20	2766	2594	5/18/16	3/6/17	Scaffold	SC	SAMEA2236422	GCA_900080595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/595/GCA_900080595.1_11641_1_19	-	NA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.12828	39.6	-	FWQU01	438	2245	2079	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545971	GCA_900171225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/225/GCA_900171225.1_Hermans-1144	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.02724	39.7	-	FWQR01	231	2179	1996	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545863	GCA_900171235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/235/GCA_900171235.1_Hermans-78	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.85101	32.8	-	FKOT01	32	3019	2867	5/18/16	3/6/17	Scaffold	SC	SAMEA2236408	GCA_900080605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/605/GCA_900080605.1_11641_1_4	-	NA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.70775	32.8	-	FKYI01	9	2797	2640	5/18/16	3/6/17	Scaffold	SC	SAMEA2236454	GCA_900080615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/615/GCA_900080615.1_11641_1_53	-	NA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.08758	39.6	-	FWQQ01	320	2222	2044	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545957	GCA_900171245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/245/GCA_900171245.1_Hermans-991	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.13194	39.4	-	FWRF01	329	2272	2093	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545936	GCA_900171255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/255/GCA_900171255.1_Hermans-632	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.85562	32.7	-	FKML01	41	3005	2838	5/18/16	3/6/17	Scaffold	SC	SAMEA2236451	GCA_900080635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/635/GCA_900080635.1_11641_1_50	-	NA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.87556	32.8	-	FKOV01	28	3043	2883	5/18/16	3/6/17	Scaffold	SC	SAMEA2236458	GCA_900080645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/645/GCA_900080645.1_11641_1_57	-	NA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.06672	39.6	-	FWRM01	296	2186	1993	4/26/17	5/6/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545915	GCA_900171265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/265/GCA_900171265.1_Hermans-171	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.04551	39.6	-	FWRU01	292	2160	1974	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545955	GCA_900171295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/295/GCA_900171295.1_Hermans-210	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.77093	32.8	-	FKMN01	21	2926	2751	5/18/16	3/6/17	Scaffold	SC	SAMEA2236416	GCA_900080655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/655/GCA_900080655.1_11641_1_13	-	NA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.77887	32.7	-	FKMO01	26	2864	2738	5/18/16	3/6/17	Scaffold	SC	SAMEA2236449	GCA_900080665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/665/GCA_900080665.1_11641_1_48	-	NA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.11317	39.5	-	FWQZ01	334	2266	2059	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545970	GCA_900171305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/305/GCA_900171305.1_Hermans-1136	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.08694	39.6	-	FXLM01	341	2195	2023	4/26/17	5/6/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545853	GCA_900171315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/315/GCA_900171315.1_Hermans-1111	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.82995	32.8	-	FKMR01	20	2947	2823	5/18/16	3/6/17	Scaffold	SC	SAMEA2236448	GCA_900080675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/675/GCA_900080675.1_11641_1_47	-	NA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.77643	32.8	-	FKMM01	25	2901	2777	5/18/16	3/6/17	Scaffold	SC	SAMEA2236410	GCA_900080685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/685/GCA_900080685.1_11641_1_6	-	NA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.06724	39.6	-	FWQT01	303	2181	1995	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545868	GCA_900171325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/325/GCA_900171325.1_Hermans-805	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.08688	39.4	-	FWRN01	331	2221	2018	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545877	GCA_900171335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/335/GCA_900171335.1_Hermans-9	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.82893	32.8	-	FKNE01	28	2956	2829	5/18/16	3/6/17	Scaffold	SC	SAMEA2236455	GCA_900080705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/705/GCA_900080705.1_11641_1_54	-	NA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.74	32.8	-	FKNH01	13	2874	2720	5/18/16	3/6/17	Scaffold	SC	SAMEA2236476	GCA_900080715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/715/GCA_900080715.1_11641_1_75	-	NA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.10117	39.6	-	FWQI01	288	2237	2043	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545933	GCA_900171345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/345/GCA_900171345.1_Hermans-948	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.10538	39.6	-	FWQG01	287	2234	2044	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545887	GCA_900171355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/355/GCA_900171355.1_Hermans-394	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.77465	32.7	-	FKNL01	17	2878	2750	5/18/16	3/6/17	Scaffold	SC	SAMEA2236478	GCA_900080725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/725/GCA_900080725.1_11641_1_77	-	NA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.82702	32.8	-	FKNM01	22	2961	2830	5/18/16	3/6/17	Scaffold	SC	SAMEA2236479	GCA_900080735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/735/GCA_900080735.1_11641_1_78	-	NA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.07147	39.7	-	FWQL01	291	2197	2016	4/26/17	5/6/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545979	GCA_900171375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/375/GCA_900171375.1_Hermans-1537	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.08513	39.7	-	FWQA01	310	2215	2031	4/26/17	5/6/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545861	GCA_900171385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/385/GCA_900171385.1_Hermans-384	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.86742	32.8	-	FKNN01	34	3022	2880	5/18/16	3/6/17	Scaffold	SC	SAMEA2236480	GCA_900080745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/745/GCA_900080745.1_11641_1_79	-	NA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.8612	32.8	-	FKNO01	43	3009	2873	5/18/16	3/6/17	Scaffold	SC	SAMEA2236483	GCA_900080755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/755/GCA_900080755.1_11641_1_82	-	NA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.0924	39.6	-	FWRR01	315	2235	2036	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545968	GCA_900171395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/395/GCA_900171395.1_Hermans-1122	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.12696	39.6	-	FWRO01	431	2311	2073	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545849	GCA_900171405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/405/GCA_900171405.1_Hermans-219	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.68636	32.7	-	FKNP01	26	2761	2593	5/18/16	3/6/17	Scaffold	SC	SAMEA2236484	GCA_900080765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/765/GCA_900080765.1_11641_1_83	-	NA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.73797	32.8	-	FKNR01	19	2806	2694	5/18/16	3/6/17	Scaffold	SC	SAMEA2236485	GCA_900080775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/775/GCA_900080775.1_11641_1_84	-	NA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.16026	39.6	-	FWRI01	341	2301	2092	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545881	GCA_900171425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/425/GCA_900171425.1_Hermans-807	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.06239	39.6	-	FWPZ01	283	2169	1994	4/26/17	5/6/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545925	GCA_900171435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/435/GCA_900171435.1_Hermans-941	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.73285	32.7	-	FKNQ01	17	2806	2684	5/18/16	3/6/17	Scaffold	SC	SAMEA2236489	GCA_900080785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/785/GCA_900080785.1_11641_1_88	-	NA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.83097	32.7	-	FKNS01	22	2958	2831	5/18/16	3/6/17	Scaffold	SC	SAMEA2236412	GCA_900080795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/795/GCA_900080795.1_11641_1_9	-	NA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.03338	39.6	-	FWRT01	284	2170	1987	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545905	GCA_900171445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/445/GCA_900171445.1_Hermans-445	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.06171	39.6	-	FWQK01	302	2187	2005	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545941	GCA_900171455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/455/GCA_900171455.1_Hermans-963	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.78433	32.8	-	FKNT01	38	2930	2800	5/18/16	3/6/17	Scaffold	SC	SAMEA2236491	GCA_900080805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/805/GCA_900080805.1_11641_1_90	-	NA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.86201	32.8	-	FKNU01	26	2984	2852	5/18/16	3/6/17	Scaffold	SC	SAMEA2383473	GCA_900080815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/815/GCA_900080815.1_12625_2_11	-	MSSA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.14078	39.6	-	FWRV01	364	2289	2085	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545879	GCA_900171465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/465/GCA_900171465.1_Hermans-1596	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.06228	39.7	-	FWRG01	297	2225	2009	4/5/17	6/9/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545851	GCA_900171475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/475/GCA_900171475.1_Hermans-3	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.77765	32.7	-	FKNV01	19	2884	2762	5/18/16	3/6/17	Scaffold	SC	SAMEA2383511	GCA_900080825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/825/GCA_900080825.1_12625_2_49	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.8878	32.8	-	FKNW01	60	3056	2881	5/18/16	3/6/17	Scaffold	SC	SAMEA2383519	GCA_900080835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/835/GCA_900080835.1_12625_2_57	-	MSSA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.16254	39.6	-	FWQW01	372	2299	2087	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545947	GCA_900171485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/485/GCA_900171485.1_Hermans-198	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.0904	39.7	-	FWQS01	321	2260	2039	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545948	GCA_900171505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/505/GCA_900171505.1_Hermans-62	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.81069	32.7	-	FKNX01	28	2962	2771	5/18/16	3/6/17	Scaffold	SC	SAMEA2383953	GCA_900080845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/845/GCA_900080845.1_12625_5_16	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.73454	32.8	-	FKNY01	31	2838	2647	5/18/16	3/6/17	Scaffold	SC	SAMEA2383961	GCA_900080855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/855/GCA_900080855.1_12625_5_24	-	MRSA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.11786	39.7	-	FWSA01	345	2297	2105	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545844	GCA_900171525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/525/GCA_900171525.1_Hermans-661	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.14129	39.6	-	FWSE01	506	2300	2083	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545973	GCA_900171535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/535/GCA_900171535.1_Hermans-1180	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.84177	32.8	-	FKNZ01	23	2962	2782	5/18/16	3/6/17	Scaffold	SC	SAMEA2383969	GCA_900080865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/865/GCA_900080865.1_12625_5_32	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.64984	32.8	-	FKOA01	24	2720	2533	5/18/16	3/6/17	Scaffold	SC	SAMEA2383977	GCA_900080875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/875/GCA_900080875.1_12625_5_40	-	MRSA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.04163	39.7	-	FWRZ01	330	2180	1984	4/26/17	5/6/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545921	GCA_900171565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/565/GCA_900171565.1_Hermans-450	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.04176	39.7	-	FWRC01	314	2176	1980	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545913	GCA_900171575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/575/GCA_900171575.1_Hermans-449	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.84915	32.7	-	FKOB01	37	3012	2814	5/18/16	3/6/17	Scaffold	SC	SAMEA2383985	GCA_900080885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/885/GCA_900080885.1_12625_5_48	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.88211	32.8	-	FKOC01	33	3034	2893	5/18/16	3/6/17	Scaffold	SC	SAMEA2383991	GCA_900080895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/895/GCA_900080895.1_12625_5_54	-	MSSA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.12063	39.6	-	FWSF01	342	2282	2073	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545952	GCA_900171585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/585/GCA_900171585.1_Hermans-658	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.11539	39.6	-	FWSD01	394	2216	2018	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545981	GCA_900171595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/595/GCA_900171595.1_Hermans-1632	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.73881	32.7	-	FKOG01	27	2840	2692	5/18/16	3/6/17	Scaffold	SC	SAMEA2383943	GCA_900080905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/905/GCA_900080905.1_12625_5_6	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.65034	32.8	-	FKOD01	21	2719	2530	5/18/16	3/6/17	Scaffold	SC	SAMEA2383945	GCA_900080915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/915/GCA_900080915.1_12625_5_8	-	MSSA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.1662	39.5	-	FWSK01	329	2338	2120	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545888	GCA_900171605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/605/GCA_900171605.1_Hermans-272	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.093	39.6	-	FWSG01	284	2244	2044	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545910	GCA_900171615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/615/GCA_900171615.1_Hermans-813	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.82287	32.7	-	FKOF01	21	2934	2755	5/18/16	3/6/17	Scaffold	SC	SAMEA2384022	GCA_900080925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/925/GCA_900080925.1_12625_5_85	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.68636	32.7	-	FKOE01	24	2771	2592	5/18/16	3/6/17	Scaffold	SC	SAMEA2384030	GCA_900080935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/935/GCA_900080935.1_12625_5_93	-	MSSA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.08474	39.6	-	FWSB01	316	2206	2014	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545858	GCA_900171625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/625/GCA_900171625.1_Hermans-1190	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.06128	39.6	-	FWSJ01	293	2167	1986	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545956	GCA_900171635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/635/GCA_900171635.1_Hermans-68	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.79885	32.7	-	FKOH01	39	2974	2775	5/18/16	3/6/17	Scaffold	SC	SAMEA2384045	GCA_900080945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/945/GCA_900080945.1_12625_6_13	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.71668	32.7	-	FKOI01	12	2834	2675	5/18/16	3/6/17	Scaffold	SC	SAMEA2384046	GCA_900080955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/955/GCA_900080955.1_12625_6_14	-	MSSA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.11479	39.6	-	FWRY01	381	2265	2040	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545982	GCA_900171645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/645/GCA_900171645.1_Hermans-1635	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.06446	39.6	-	FWSH01	263	2235	2032	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545929	GCA_900171655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/655/GCA_900171655.1_Hermans-458	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.81087	32.7	-	FKOJ01	18	2907	2787	5/18/16	3/6/17	Scaffold	SC	SAMEA2384047	GCA_900080965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/965/GCA_900080965.1_12625_6_15	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.8053	32.7	-	FKON01	30	2901	2784	5/18/16	3/6/17	Scaffold	SC	SAMEA2384060	GCA_900080975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/975/GCA_900080975.1_12625_6_28	-	MSSA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.07823	39.7	-	FWRX01	282	2232	2045	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545894	GCA_900171665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/665/GCA_900171665.1_Hermans-807Star	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.15917	39.6	-	FWSC01	359	2297	2095	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545902	GCA_900171675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/675/GCA_900171675.1_Hermans-809	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.73167	32.7	-	FKOM01	16	2857	2698	5/18/16	3/6/17	Scaffold	SC	SAMEA2384063	GCA_900080985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/985/GCA_900080985.1_12625_6_31	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.73258	32.7	-	FKOL01	20	2808	2685	5/18/16	3/6/17	Scaffold	SC	SAMEA2384069	GCA_900080995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/080/995/GCA_900080995.1_12625_6_37	-	MSSA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.14809	39.6	-	FWSI01	333	2301	2094	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545875	GCA_900171685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/685/GCA_900171685.1_Hermans-265	-	-
Streptococcus pneumoniae	1313	PRJEB10893	314860	Terrabacteria group	Firmicutes	2.17193	39.4	-	FWXA01	346	2309	2115	4/6/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545815	GCA_900172195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/195/GCA_900172195.1_PMEN	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.70036	32.7	-	FKOK01	12	2819	2662	5/18/16	3/6/17	Scaffold	SC	SAMEA2384071	GCA_900081005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/005/GCA_900081005.1_12625_6_39	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.81599	32.8	-	FKOQ01	34	2978	2814	5/18/16	3/6/17	Scaffold	SC	SAMEA2384079	GCA_900081015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/015/GCA_900081015.1_12625_6_47	-	MSSA
Streptococcus pneumoniae	1313	PRJEB10893	314860	Terrabacteria group	Firmicutes	2.05409	39.7	-	FWSZ01	335	2179	2019	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545820	GCA_900172205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/205/GCA_900172205.1_PMEN	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.20972	39.5	-	FWTU01	368	2389	2182	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545922	GCA_900172395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/395/GCA_900172395.1_Hermans-310	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.84524	32.8	-	FKOP01	37	2960	2836	5/18/16	3/6/17	Scaffold	SC	SAMEA2384078	GCA_900081025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/025/GCA_900081025.1_12625_6_46	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.72956	32.8	-	FKOO01	16	2849	2700	5/18/16	3/6/17	Scaffold	SC	SAMEA2384037	GCA_900081035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/035/GCA_900081035.1_12625_6_5	-	MRSA
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.10378	39.6	-	FXLK01	306	2234	2030	4/26/17	5/6/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545943	GCA_900172405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/405/GCA_900172405.1_Hermans-766	-	-
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	2.10407	39.6	-	FWRQ01	327	2220	2038	4/5/17	4/17/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545862	GCA_900172415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/172/415/GCA_900172415.1_Hermans-250	-	-
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.73285	32.7	-	FKOR01	19	2811	2687	5/19/16	3/6/17	Scaffold	SC	SAMEA2384085	GCA_900081045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/045/GCA_900081045.1_12625_6_53	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.80966	32.7	-	FKOS01	19	2907	2778	5/18/16	3/6/17	Scaffold	SC	SAMEA2384086	GCA_900081055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/055/GCA_900081055.1_12625_6_54	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.04406	39.5	-	FYGA01	65	2231	2018	6/25/17	7/5/17	Scaffold	SC	SAMEA1026654	GCA_900188585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/585/GCA_900188585.1_6470_3_14	-	UoS0061
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10478	39.5	-	FYGH01	72	2295	2079	6/25/17	7/5/17	Scaffold	SC	SAMEA1026712	GCA_900188615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/615/GCA_900188615.1_6470_4_11	-	UoS0154
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.74017	32.7	-	FKOW01	34	2801	2643	5/18/16	3/6/17	Scaffold	SC	SAMEA2384038	GCA_900081065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/065/GCA_900081065.1_12625_6_6	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.71948	32.7	-	FKOU01	19	2840	2684	5/18/16	3/6/17	Scaffold	SC	SAMEA2384095	GCA_900081075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/075/GCA_900081075.1_12625_6_63	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.12128	39.6	-	FYFL01	67	2343	2097	6/25/17	7/5/17	Scaffold	SC	SAMEA1026518	GCA_900188625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/625/GCA_900188625.1_6470_4_7	-	UoS0140
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.01045	39.8	-	FYGD01	29	2254	2011	6/25/17	7/5/17	Scaffold	SC	SAMEA1026332	GCA_900188645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/645/GCA_900188645.1_6470_4_1	-	UoS0103
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.71778	32.7	-	FKOY01	16	2791	2670	5/18/16	3/6/17	Scaffold	SC	SAMEA2384100	GCA_900081085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/085/GCA_900081085.1_12625_6_68	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.90018	32.8	-	FKOZ01	28	3058	2913	5/18/16	3/6/17	Scaffold	SC	SAMEA2384101	GCA_900081095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/095/GCA_900081095.1_12625_6_69	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07698	39.5	-	FYGE01	51	2269	2041	6/25/17	7/5/17	Scaffold	SC	SAMEA1026528	GCA_900188775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/775/GCA_900188775.1_6470_3_20	-	UoS0081
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.12487	39.5	-	FYGF01	67	2343	2085	6/25/17	7/5/17	Scaffold	SC	SAMEA1026361	GCA_900188805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/805/GCA_900188805.1_6470_4_3	-	UoS0113
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.79013	32.8	-	FKPA01	20	2887	2755	5/18/16	3/6/17	Scaffold	SC	SAMEA2384039	GCA_900081105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/105/GCA_900081105.1_12625_6_7	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.70799	32.7	-	FKPB01	28	2801	2609	5/18/16	3/6/17	Scaffold	SC	SAMEA2384103	GCA_900081115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/115/GCA_900081115.1_12625_6_71	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08176	39.6	-	FYFR01	46	2277	2058	6/25/17	7/5/17	Scaffold	SC	SAMEA1026433	GCA_900188865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/865/GCA_900188865.1_6470_4_13	-	UoS0156
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.0229	39.7	-	FYGR01	82	2286	1989	6/25/17	7/5/17	Scaffold	SC	SAMEA1026608	GCA_900188925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/925/GCA_900188925.1_6470_3_6	-	UoS0023
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.86906	32.8	-	FKPC01	47	3020	2810	5/18/16	3/6/17	Scaffold	SC	SAMEA2384108	GCA_900081125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/125/GCA_900081125.1_12625_6_76	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.89352	32.7	-	FKPE01	45	3015	2883	5/18/16	3/6/17	Scaffold	SC	SAMEA2384109	GCA_900081135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/135/GCA_900081135.1_12625_6_77	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09562	39.5	-	FYFE01	53	2283	2069	6/25/17	7/5/17	Scaffold	SC	SAMEA1026632	GCA_900188965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/965/GCA_900188965.1_6470_3_13	-	UoS0058
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.13703	39.6	-	FYFJ01	53	2409	2123	6/25/17	7/5/17	Scaffold	SC	SAMEA1026378	GCA_900188985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/188/985/GCA_900188985.1_6470_4_4	-	UoS0135
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.80933	32.7	-	FKPD01	18	2910	2786	5/18/16	3/6/17	Scaffold	SC	SAMEA2384110	GCA_900081145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/145/GCA_900081145.1_12625_6_78	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.92494	32.8	-	FKPF01	49	3094	2934	5/18/16	3/6/17	Scaffold	SC	SAMEA2384111	GCA_900081155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/155/GCA_900081155.1_12625_6_79	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.0598	39.6	-	FYFT01	80	2258	2020	6/25/17	7/5/17	Scaffold	SC	SAMEA1026409	GCA_900189015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/015/GCA_900189015.1_6470_4_16	-	UoS0163
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.1263	39.6	-	FYFZ01	67	2370	2117	6/25/17	7/5/17	Scaffold	SC	SAMEA1026362	GCA_900189035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/035/GCA_900189035.1_6470_4_18	-	UoS0172
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.78267	32.8	-	FKPH01	30	2875	2756	5/18/16	3/6/17	Scaffold	SC	SAMEA2384117	GCA_900081165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/165/GCA_900081165.1_12625_6_85	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.74143	32.8	-	FKPI01	22	2846	2724	5/18/16	3/6/17	Scaffold	SC	SAMEA2383858	GCA_900081175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/175/GCA_900081175.1_12641_1_16	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.1174	39.7	-	FYFI01	86	2377	2092	6/25/17	7/5/17	Scaffold	SC	SAMEA1026422	GCA_900189045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/045/GCA_900189045.1_6470_4_15	-	UoS0160
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07231	39.6	-	FYGV01	68	2259	2011	6/25/17	7/5/17	Scaffold	SC	SAMEA1026350	GCA_900189065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/065/GCA_900189065.1_6470_4_19	-	UoS0173
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.78914	32.8	-	FKPG01	17	2883	2759	5/18/16	3/6/17	Scaffold	SC	SAMEA2384118	GCA_900081185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/185/GCA_900081185.1_12625_6_86	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.72356	32.7	-	FKPJ01	18	2812	2690	5/18/16	3/6/17	Scaffold	SC	SAMEA2383866	GCA_900081195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/195/GCA_900081195.1_12641_1_24	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.97741	39.7	-	FYGP01	32	2189	1978	6/25/17	7/5/17	Scaffold	SC	SAMEA1026337	GCA_900189075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/075/GCA_900189075.1_6470_4_20	-	UoS0174
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09562	39.6	-	FYGU01	101	2344	2050	6/25/17	7/5/17	Scaffold	SC	SAMEA1026833	GCA_900189085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/085/GCA_900189085.1_6470_4_22	-	UoS0176
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.75723	32.7	-	FKPL01	17	2845	2739	5/18/16	3/6/17	Scaffold	SC	SAMEA2383874	GCA_900081205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/205/GCA_900081205.1_12641_1_32	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.84722	32.7	-	FKPN01	29	2952	2806	5/18/16	3/6/17	Scaffold	SC	SAMEA2383889	GCA_900081215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/215/GCA_900081215.1_12641_1_47	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.11713	39.6	-	FYHI01	64	2356	2085	6/25/17	7/5/17	Scaffold	SC	SAMEA1026711	GCA_900189155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/155/GCA_900189155.1_6470_5_4	-	UoS0215
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.99745	39.7	-	FYHC01	74	2232	1973	6/25/17	7/5/17	Scaffold	SC	SAMEA1026737	GCA_900189165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/165/GCA_900189165.1_6470_5_5	-	UoS0218
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.73532	32.8	-	FKPM01	26	2809	2666	5/18/16	3/6/17	Scaffold	SC	SAMEA2383897	GCA_900081225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/225/GCA_900081225.1_12641_1_55	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.72976	32.8	-	FKPK01	16	2804	2664	5/18/16	3/6/17	Scaffold	SC	SAMEA2383898	GCA_900081235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/235/GCA_900081235.1_12641_1_56	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.1017	39.5	-	FYGY01	84	2328	2078	6/25/17	7/5/17	Scaffold	SC	SAMEA1026683	GCA_900189185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/185/GCA_900189185.1_6470_5_7	-	UoS0221
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08635	39.6	-	FYIE01	63	2288	2044	6/25/17	7/5/17	Scaffold	SC	SAMEA1026484	GCA_900189255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/255/GCA_900189255.1_6470_6_5	-	UoS0280
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.80459	32.7	-	FKPO01	33	2909	2771	5/18/16	3/6/17	Scaffold	SC	SAMEA2383905	GCA_900081245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/245/GCA_900081245.1_12641_1_63	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.88087	32.7	-	FKPP01	29	2996	2889	5/18/16	3/6/17	Scaffold	SC	SAMEA2383906	GCA_900081255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/255/GCA_900081255.1_12641_1_64	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.11136	39.6	-	FYIK01	53	2321	2087	6/25/17	7/5/17	Scaffold	SC	SAMEA1026616	GCA_900189295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/295/GCA_900189295.1_6470_5_20	-	UoS0263
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06787	39.6	-	FYIQ01	53	2272	2050	6/25/17	7/5/17	Scaffold	SC	SAMEA1026395	GCA_900189375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/375/GCA_900189375.1_6470_6_2	-	UoS0274
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.81639	32.7	-	FKPQ01	25	2920	2802	5/18/16	3/6/17	Scaffold	SC	SAMEA2383913	GCA_900081265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/265/GCA_900081265.1_12641_1_71	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.67456	32.8	-	FKPR01	23	2715	2587	5/18/16	3/6/17	Scaffold	SC	SAMEA2383921	GCA_900081275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/275/GCA_900081275.1_12641_1_79	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08382	39.5	-	FYIM01	76	2293	2061	6/25/17	7/5/17	Scaffold	SC	SAMEA1026548	GCA_900189395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/395/GCA_900189395.1_6470_6_10	-	UoS0289
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.9661	39.8	-	FYHT01	78	2148	1902	6/25/17	7/5/17	Scaffold	SC	SAMEA1026425	GCA_900189415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/415/GCA_900189415.1_6470_6_19	-	UoS0307
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.79348	32.7	-	FKPS01	18	2924	2790	5/18/16	3/6/17	Scaffold	SC	SAMEA2383850	GCA_900081285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/285/GCA_900081285.1_12641_1_8	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.80553	32.7	-	FKPT01	21	2903	2778	5/18/16	3/6/17	Scaffold	SC	SAMEA2383922	GCA_900081295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/295/GCA_900081295.1_12641_1_80	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.1202	39.6	-	FYIT01	47	2315	2100	6/25/17	7/5/17	Scaffold	SC	SAMEA1026377	GCA_900189435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/435/GCA_900189435.1_6470_6_13	-	UoS0297
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.12554	39.6	-	FYHZ01	66	2343	2105	6/25/17	7/5/17	Scaffold	SC	SAMEA1026470	GCA_900189515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/515/GCA_900189515.1_6470_6_23	-	UoS0314
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.67568	32.8	-	FKPV01	25	2722	2587	5/18/16	3/6/17	Scaffold	SC	SAMEA2383929	GCA_900081305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/305/GCA_900081305.1_12641_1_87	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.76258	32.7	-	FKPU01	29	2858	2701	5/18/16	3/6/17	Scaffold	SC	SAMEA2383930	GCA_900081315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/315/GCA_900081315.1_12641_1_88	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07884	39.6	-	FYIR01	60	2290	2059	6/25/17	7/5/17	Scaffold	SC	SAMEA1026557	GCA_900189555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/555/GCA_900189555.1_6470_6_8	-	UoS0285
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.14095	39.5	-	FYJC01	71	2350	2121	6/25/17	7/5/17	Scaffold	SC	SAMEA1026323	GCA_900189615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/615/GCA_900189615.1_6472_5_7	-	UoS0322
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.74579	32.7	-	FKPW01	21	2822	2686	5/18/16	3/6/17	Scaffold	SC	SAMEA2383937	GCA_900081325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/325/GCA_900081325.1_12641_1_95	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.71141	32.7	-	FKPX01	41	2775	2629	5/18/16	3/6/17	Scaffold	SC	SAMEA2384248	GCA_900081335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/335/GCA_900081335.1_12641_2_26	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07648	39.6	-	FYJH01	48	2293	2045	6/25/17	7/5/17	Scaffold	SC	SAMEA1026510	GCA_900189655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/655/GCA_900189655.1_6472_5_17	-	UoS2024
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06134	39.5	-	FYJG01	69	2254	2025	6/25/17	7/5/17	Scaffold	SC	SAMEA1026417	GCA_900189705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/705/GCA_900189705.1_6472_6_12	-	UoS2073
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.71433	32.8	-	FKPY01	44	2788	2632	5/18/16	3/6/17	Scaffold	SC	SAMEA2384225	GCA_900081345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/345/GCA_900081345.1_12641_2_3	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.78239	32.7	-	FKPZ01	21	2896	2769	5/18/16	3/6/17	Scaffold	SC	SAMEA2384256	GCA_900081355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/355/GCA_900081355.1_12641_2_34	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05347	39.5	-	FYJZ01	60	2265	2045	6/25/17	7/5/17	Scaffold	SC	SAMEA1026551	GCA_900189725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/725/GCA_900189725.1_6472_5_14	-	UoS2014
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.0748	39.6	-	FYKO01	64	2270	2054	6/25/17	7/5/17	Scaffold	SC	SAMEA1026527	GCA_900189745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/745/GCA_900189745.1_6472_5_3	-	UoS0318
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.72965	32.7	-	FKQB01	11	2809	2677	5/18/16	3/6/17	Scaffold	SC	SAMEA2384257	GCA_900081365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/365/GCA_900081365.1_12641_2_35	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.86698	32.7	-	FKQA01	42	2977	2825	5/18/16	3/6/17	Scaffold	SC	SAMEA2384265	GCA_900081375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/375/GCA_900081375.1_12641_2_43	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09294	39.5	-	FYKQ01	67	2279	2056	6/25/17	7/5/17	Scaffold	SC	SAMEA1026367	GCA_900189815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/815/GCA_900189815.1_6472_6_9	-	UoS2063
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.04932	39.7	-	FYJW01	62	2210	2003	6/25/17	7/5/17	Scaffold	SC	SAMEA1026597	GCA_900189825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/825/GCA_900189825.1_6472_6_3	-	UoS2051
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.83648	32.7	-	FKQC01	27	2978	2846	5/18/16	3/6/17	Scaffold	SC	SAMEA2384272	GCA_900081385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/385/GCA_900081385.1_12641_2_50	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.69615	32.8	-	FKQD01	25	2749	2606	5/18/16	3/6/17	Scaffold	SC	SAMEA2384273	GCA_900081395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/395/GCA_900081395.1_12641_2_51	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06375	39.5	-	FYKB01	59	2249	2026	6/25/17	7/5/17	Scaffold	SC	SAMEA1026766	GCA_900189905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/905/GCA_900189905.1_6472_7_6	-	UoS2180
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06384	39.7	-	FYJV01	58	2291	2069	6/25/17	7/5/17	Scaffold	SC	SAMEA1026651	GCA_900189915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/915/GCA_900189915.1_6472_5_22	-	UoS2034
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.79805	32.8	-	FKQE01	32	2908	2794	5/18/16	3/6/17	Scaffold	SC	SAMEA2384281	GCA_900081405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/405/GCA_900081405.1_12641_2_59	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.87585	32.7	-	FKQF01	45	3029	2910	5/18/16	3/6/17	Scaffold	SC	SAMEA2384289	GCA_900081415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/415/GCA_900081415.1_12641_2_67	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07927	39.6	-	FYKZ01	53	2286	2048	6/25/17	7/5/17	Scaffold	SC	SAMEA1026645	GCA_900189925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/925/GCA_900189925.1_6472_7_5	-	UoS2173
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.01735	39.7	-	FYLD01	41	2205	1986	6/25/17	7/5/17	Scaffold	SC	SAMEA1026577	GCA_900189945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/945/GCA_900189945.1_6472_5_13	-	UoS2011
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.73318	32.7	-	FKQG01	26	2819	2689	5/18/16	3/6/17	Scaffold	SC	SAMEA2384297	GCA_900081425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/425/GCA_900081425.1_12641_2_75	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.77506	32.7	-	FKQI01	43	2828	2665	5/18/16	3/6/17	Scaffold	SC	SAMEA2384305	GCA_900081435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/435/GCA_900081435.1_12641_2_83	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03248	39.6	-	FYKC01	40	2231	2017	6/25/17	7/5/17	Scaffold	SC	SAMEA1026369	GCA_900189985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/189/985/GCA_900189985.1_6472_6_4	-	UoS2052
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09723	39.6	-	FYJU01	61	2299	2078	6/25/17	7/5/17	Scaffold	SC	SAMEA1026368	GCA_900190025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/025/GCA_900190025.1_6472_6_23	-	UoS2142
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.80863	32.7	-	FKQJ01	40	2881	2729	5/18/16	3/6/17	Scaffold	SC	SAMEA2384312	GCA_900081445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/445/GCA_900081445.1_12641_2_90	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.8507	32.7	-	FKQH01	33	2980	2850	5/18/16	3/6/17	Scaffold	SC	SAMEA2384313	GCA_900081455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/455/GCA_900081455.1_12641_2_91	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.16725	39.7	-	FYJY01	39	2406	2176	6/25/17	7/5/17	Scaffold	SC	SAMEA1026769	GCA_900190095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/095/GCA_900190095.1_6472_5_20	-	UoS2030
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.97845	39.8	-	FYKK01	26	2180	1965	6/25/17	7/5/17	Scaffold	SC	SAMEA1026474	GCA_900190125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/125/GCA_900190125.1_6472_7_10	-	UoS2199
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.67558	32.8	-	FKQK01	14	2727	2590	5/18/16	3/6/17	Scaffold	SC	SAMEA2384327	GCA_900081465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/465/GCA_900081465.1_12641_3_10	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.80742	32.7	-	FKQL01	23	2914	2778	5/18/16	3/6/17	Scaffold	SC	SAMEA2384328	GCA_900081475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/475/GCA_900081475.1_12641_3_11	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10671	39.6	-	FYKR01	52	2310	2082	6/25/17	7/5/17	Scaffold	SC	SAMEA1026695	GCA_900190175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/175/GCA_900190175.1_6472_5_24	-	UoS2038
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06914	39.6	-	FYLI01	27	2270	2029	6/25/17	7/5/17	Scaffold	SC	SAMEA1026331	GCA_900190235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/235/GCA_900190235.1_6472_7_20	-	UoS2236
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.72632	32.8	-	FKQP01	19	2785	2642	5/18/16	3/6/17	Scaffold	SC	SAMEA2384329	GCA_900081485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/485/GCA_900081485.1_12641_3_12	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.75005	32.7	-	FKQO01	21	2845	2697	5/18/16	3/6/17	Scaffold	SC	SAMEA2384335	GCA_900081495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/495/GCA_900081495.1_12641_3_18	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10294	39.6	-	FYMG01	57	2305	2073	6/25/17	7/5/17	Scaffold	SC	SAMEA1026488	GCA_900190295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/295/GCA_900190295.1_6472_8_2	-	UoS2250
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.11964	39.6	-	FYMI01	59	2331	2112	6/25/17	7/5/17	Scaffold	SC	SAMEA1026461	GCA_900190335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/335/GCA_900190335.1_6472_8_4	-	UoS2258
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.7637	32.7	-	FKQM01	37	2868	2695	5/18/16	3/6/17	Scaffold	SC	SAMEA2384336	GCA_900081505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/505/GCA_900081505.1_12641_3_19	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.67658	32.8	-	FKQN01	18	2729	2584	5/18/16	3/6/17	Scaffold	SC	SAMEA2384319	GCA_900081515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/515/GCA_900081515.1_12641_3_2	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10464	39.6	-	FYMC01	45	2322	2096	6/25/17	7/5/17	Scaffold	SC	SAMEA1026466	GCA_900190345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/345/GCA_900190345.1_6472_8_24	-	UoS2319
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09612	39.6	-	FYLS01	29	2307	2089	6/25/17	7/5/17	Scaffold	SC	SAMEA1026448	GCA_900190355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/355/GCA_900190355.1_6472_8_5	-	UoS2255
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.74185	32.7	-	FKQQ01	19	2810	2695	5/18/16	3/6/17	Scaffold	SC	SAMEA2384337	GCA_900081525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/525/GCA_900081525.1_12641_3_20	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.7966	32.7	-	FKQR01	18	2931	2797	5/18/16	3/6/17	Scaffold	SC	SAMEA2384343	GCA_900081535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/535/GCA_900081535.1_12641_3_26	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.14157	39.5	-	FYLX01	74	2370	2127	6/25/17	7/5/17	Scaffold	SC	SAMEA1026692	GCA_900190385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/385/GCA_900190385.1_6593_2_12	-	UoS2351
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.12147	39.6	-	FYLU01	44	2333	2115	6/25/17	7/5/17	Scaffold	SC	SAMEA1026345	GCA_900190415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/415/GCA_900190415.1_6593_2_10	-	UoS2343
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.86765	32.7	-	FKQS01	55	3013	2839	5/18/16	3/6/17	Scaffold	SC	SAMEA2384345	GCA_900081545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/545/GCA_900081545.1_12641_3_28	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.88293	32.8	-	FKQT01	67	3025	2884	5/18/16	3/6/17	Scaffold	SC	SAMEA2384344	GCA_900081555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/555/GCA_900081555.1_12641_3_27	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.13614	39.5	-	FYMT01	56	2348	2115	6/25/17	7/5/17	Scaffold	SC	SAMEA1026537	GCA_900190515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/515/GCA_900190515.1_6472_8_9	-	UoS2279
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.04321	39.6	-	FYNB01	49	2239	2023	6/25/17	7/5/17	Scaffold	SC	SAMEA1026720	GCA_900190685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/685/GCA_900190685.1_6593_2_18	-	UoS3001
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.74392	32.8	-	FKQU01	17	2855	2733	5/18/16	3/6/17	Scaffold	SC	SAMEA2384351	GCA_900081565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/565/GCA_900081565.1_12641_3_34	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.8802	32.8	-	FKQV01	34	3008	2884	5/18/16	3/6/17	Scaffold	SC	SAMEA2384353	GCA_900081575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/575/GCA_900081575.1_12641_3_36	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.00984	39.7	-	FYNH01	30	2255	2007	6/25/17	7/5/17	Scaffold	SC	SAMEA1026747	GCA_900190705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/705/GCA_900190705.1_6593_2_15	-	UoS2370
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.053	39.6	-	FYND01	54	2263	2041	6/25/17	7/5/17	Scaffold	SC	SAMEA1026653	GCA_900190745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/745/GCA_900190745.1_6593_2_22	-	UoS3016
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.72392	32.7	-	FKQW01	17	2813	2690	5/18/16	3/6/17	Scaffold	SC	SAMEA2384359	GCA_900081585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/585/GCA_900081585.1_12641_3_42	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.85654	32.7	-	FKQX01	18	2985	2849	5/18/16	3/6/17	Scaffold	SC	SAMEA2384321	GCA_900081595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/595/GCA_900081595.1_12641_3_4	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05452	39.5	-	FYNI01	59	2234	2003	6/25/17	7/5/17	Scaffold	SC	SAMEA1026486	GCA_900190765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/765/GCA_900190765.1_6593_2_24	-	UoS3020
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.02388	39.7	-	FYNK01	55	2239	1999	6/25/17	7/5/17	Scaffold	SC	SAMEA1026458	GCA_900190775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/775/GCA_900190775.1_6512_1_1	-	UoS3021
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.74043	32.8	-	FKQY01	22	2822	2680	5/18/16	3/6/17	Scaffold	SC	SAMEA2384360	GCA_900081605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/605/GCA_900081605.1_12641_3_43	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.73538	32.6	-	FKYF01	9	2824	2689	5/18/16	3/6/17	Scaffold	SC	SAMEA2384361	GCA_900081615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/615/GCA_900081615.1_12641_3_44	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07274	39.5	-	FYNL01	74	2286	2044	6/25/17	7/5/17	Scaffold	SC	SAMEA1026441	GCA_900190785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/785/GCA_900190785.1_6512_1_2	-	UoS3022
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08184	39.6	-	FYNQ01	56	2294	2070	6/25/17	7/5/17	Scaffold	SC	SAMEA1026532	GCA_900190825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/825/GCA_900190825.1_6512_1_6	-	UoS3031
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.80001	32.8	-	FKQZ01	37	2913	2750	5/18/16	3/6/17	Scaffold	SC	SAMEA2384368	GCA_900081625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/625/GCA_900081625.1_12641_3_51	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.75858	32.7	-	FKRA01	15	2862	2742	5/18/16	3/6/17	Scaffold	SC	SAMEA2384375	GCA_900081635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/635/GCA_900081635.1_12641_3_58	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.97919	39.8	-	FYNW01	29	2193	1959	6/25/17	7/5/17	Scaffold	SC	SAMEA1026614	GCA_900190855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/855/GCA_900190855.1_6512_1_8	-	UoS3033
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.12802	39.5	-	FYOH01	47	2353	2089	6/25/17	7/5/17	Scaffold	SC	SAMEA1026606	GCA_900190865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/865/GCA_900190865.1_6512_1_9	-	UoS3038
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.88129	32.8	-	FKRD01	72	3006	2869	5/18/16	3/6/17	Scaffold	SC	SAMEA2384376	GCA_900081645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/645/GCA_900081645.1_12641_3_59	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.84412	32.7	-	FKRB01	45	2985	2820	5/19/16	3/6/17	Scaffold	SC	SAMEA2384384	GCA_900081655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/655/GCA_900081655.1_12641_3_67	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09698	39.6	-	FYNS01	39	2274	2065	6/25/17	7/5/17	Scaffold	SC	SAMEA1026638	GCA_900190875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/875/GCA_900190875.1_6512_1_11	-	UoS3048
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.12175	39.6	-	FYNT01	78	2334	2082	6/25/17	7/5/17	Scaffold	SC	SAMEA1026684	GCA_900190895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/895/GCA_900190895.1_6512_1_13	-	UoS3055
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.73364	32.8	-	FKRC01	20	2822	2674	5/18/16	3/6/17	Scaffold	SC	SAMEA2384390	GCA_900081665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/665/GCA_900081665.1_12641_3_73	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.84701	32.8	-	FKRE01	25	2969	2843	5/18/16	3/6/17	Scaffold	SC	SAMEA2384392	GCA_900081675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/675/GCA_900081675.1_12641_3_75	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.04619	39.7	-	FYOG01	34	2250	2022	6/25/17	7/5/17	Scaffold	SC	SAMEA1026459	GCA_900190905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/905/GCA_900190905.1_6512_1_15	-	UoS3060
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06579	39.5	-	FYNV01	53	2277	2058	6/25/17	7/5/17	Scaffold	SC	SAMEA1026699	GCA_900190915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/915/GCA_900190915.1_6512_1_14	-	UoS3059
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.81243	32.7	-	FKRF01	18	2920	2802	5/18/16	3/6/17	Scaffold	SC	SAMEA2384398	GCA_900081685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/685/GCA_900081685.1_12641_3_81	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.73198	32.8	-	FKRG01	20	2848	2666	5/18/16	3/6/17	Scaffold	SC	SAMEA2384399	GCA_900081695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/695/GCA_900081695.1_12641_3_82	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10798	39.6	-	FYNU01	53	2319	2078	6/25/17	7/5/17	Scaffold	SC	SAMEA1026472	GCA_900190925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/925/GCA_900190925.1_6512_1_16	-	UoS3063
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09462	39.5	-	FYOW01	42	2289	2064	6/25/17	7/5/17	Scaffold	SC	SAMEA1026688	GCA_900190935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/935/GCA_900190935.1_6512_1_24	-	UoS3081
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.72782	32.7	-	FKRI01	20	2861	2707	5/18/16	3/6/17	Scaffold	SC	SAMEA2384400	GCA_900081705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/705/GCA_900081705.1_12641_3_83	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.80475	32.7	-	FKRH01	29	2905	2776	5/18/16	3/6/17	Scaffold	SC	SAMEA2384406	GCA_900081715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/715/GCA_900081715.1_12641_3_89	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10284	39.6	-	FYOB01	42	2273	2075	6/25/17	7/5/17	Scaffold	SC	SAMEA1026672	GCA_900190945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/945/GCA_900190945.1_6512_1_23	-	UoS3079
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03412	39.6	-	FYOE01	48	2243	1989	6/25/17	7/5/17	Scaffold	SC	SAMEA1026770	GCA_900190975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/975/GCA_900190975.1_6512_1_19	-	UoS3066
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.88078	32.7	-	FKRJ01	30	3001	2883	5/18/16	3/6/17	Scaffold	SC	SAMEA2384407	GCA_900081725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/725/GCA_900081725.1_12641_3_90	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.84029	32.8	-	FKRK01	39	2983	2847	5/18/16	3/6/17	Scaffold	SC	SAMEA2384408	GCA_900081735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/735/GCA_900081735.1_12641_3_91	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.98251	39.9	-	FYOO01	108	2097	1914	6/25/17	7/5/17	Scaffold	SC	SAMEA1026756	GCA_900190985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/985/GCA_900190985.1_6512_1_18	-	UoS3065
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10343	39.6	-	FYOJ01	75	2306	2051	6/25/17	7/5/17	Scaffold	SC	SAMEA1026662	GCA_900190995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/190/995/GCA_900190995.1_6512_2_3	-	UoS3097
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.71496	32.7	-	FKRL01	13	2830	2674	5/18/16	3/6/17	Scaffold	SC	SAMEA2384424	GCA_900081745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/745/GCA_900081745.1_12673_1_12	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.80709	32.7	-	FKRM01	22	2913	2783	5/18/16	3/6/17	Scaffold	SC	SAMEA2384414	GCA_900081755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/755/GCA_900081755.1_12673_1_2	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06144	39.6	-	FYOA01	30	2257	2043	6/25/17	7/5/17	Scaffold	SC	SAMEA1026319	GCA_900191005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/005/GCA_900191005.1_6512_2_5	-	UoS3108
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07272	39.7	-	FYOY01	54	2276	2050	6/25/17	7/5/17	Scaffold	SC	SAMEA1026637	GCA_900191045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/045/GCA_900191045.1_6512_2_1	-	UoS3088
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.85494	32.8	-	FKRN01	40	3008	2871	5/18/16	3/6/17	Scaffold	SC	SAMEA2384432	GCA_900081765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/765/GCA_900081765.1_12673_1_20	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.75117	32.8	-	FKRP01	31	2863	2681	5/18/16	3/6/17	Scaffold	SC	SAMEA2384438	GCA_900081775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/775/GCA_900081775.1_12673_1_26	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05035	39.6	-	FYOQ01	44	2232	2018	6/25/17	7/5/17	Scaffold	SC	SAMEA1026761	GCA_900191075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/075/GCA_900191075.1_6512_2_13	-	UoS3153
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07722	39.5	-	FYOT01	41	2273	2044	6/25/17	7/5/17	Scaffold	SC	SAMEA1026429	GCA_900191115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/115/GCA_900191115.1_6512_2_16	-	UoS3159
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.69262	32.7	-	FKRO01	14	2830	2671	5/18/16	3/6/17	Scaffold	SC	SAMEA2384439	GCA_900081785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/785/GCA_900081785.1_12673_1_27	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.85518	32.8	-	FKRQ01	31	3003	2878	5/18/16	3/6/17	Scaffold	SC	SAMEA2384447	GCA_900081795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/795/GCA_900081795.1_12673_1_35	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.11556	39.5	-	FYPA01	86	2303	2055	6/25/17	7/5/17	Scaffold	SC	SAMEA1026388	GCA_900191125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/125/GCA_900191125.1_6512_2_15	-	UoS3156
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.02742	39.6	-	FYON01	37	2214	2004	6/25/17	7/5/17	Scaffold	SC	SAMEA1026412	GCA_900191135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/135/GCA_900191135.1_6512_2_17	-	UoS3160
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.75007	32.7	-	FKRR01	28	2858	2662	5/18/16	3/6/17	Scaffold	SC	SAMEA2384448	GCA_900081805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/805/GCA_900081805.1_12673_1_36	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.84348	32.8	-	FKRS01	47	2996	2797	5/18/16	3/6/17	Scaffold	SC	SAMEA2384416	GCA_900081815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/815/GCA_900081815.1_12673_1_4	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.1207	39.6	-	FYOS01	39	2332	2108	6/25/17	7/5/17	Scaffold	SC	SAMEA1026625	GCA_900191175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/175/GCA_900191175.1_6512_2_23	-	UoS3171
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03015	39.7	-	FYOX01	34	2229	2028	6/25/17	7/5/17	Scaffold	SC	SAMEA1026327	GCA_900191195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/195/GCA_900191195.1_6512_2_24	-	UoS3176
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.85448	32.7	-	FKRT01	18	2977	2855	5/18/16	3/6/17	Scaffold	SC	SAMEA2384455	GCA_900081825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/825/GCA_900081825.1_12673_1_43	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.8102	32.7	-	FKRU01	15	2922	2773	5/18/16	3/6/17	Scaffold	SC	SAMEA2384456	GCA_900081835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/835/GCA_900081835.1_12673_1_44	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08013	39.5	-	FYPF01	45	2281	2046	6/25/17	7/5/17	Scaffold	SC	SAMEA1026326	GCA_900191205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/205/GCA_900191205.1_6512_2_20	-	UoS3164
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09901	39.6	-	FYPE01	41	2315	2104	6/25/17	7/5/17	Scaffold	SC	SAMEA1026318	GCA_900191215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/215/GCA_900191215.1_6512_7_9	-	UoS4208
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.86309	32.8	-	FKRY01	38	3027	2833	5/18/16	3/6/17	Scaffold	SC	SAMEA2384463	GCA_900081845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/845/GCA_900081845.1_12673_1_51	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.78123	32.8	-	FKRV01	18	2892	2726	5/18/16	3/6/17	Scaffold	SC	SAMEA2384470	GCA_900081855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/855/GCA_900081855.1_12673_1_58	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07424	39.5	-	FYPD01	47	2261	2045	6/25/17	7/5/17	Scaffold	SC	SAMEA1026342	GCA_900191235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/235/GCA_900191235.1_6512_3_1	-	UoS3180
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05771	39.6	-	FYOV01	58	2259	2016	6/25/17	7/5/17	Scaffold	SC	SAMEA1026416	GCA_900191245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/245/GCA_900191245.1_6512_3_2	-	UoS3181
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.81794	32.7	-	FKRW01	21	2982	2815	5/18/16	3/6/17	Scaffold	SC	SAMEA2384478	GCA_900081865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/865/GCA_900081865.1_12673_1_66	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.76794	32.7	-	FKRX01	29	2890	2698	5/18/16	3/6/17	Scaffold	SC	SAMEA2384479	GCA_900081875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/875/GCA_900081875.1_12673_1_67	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.11513	39.5	-	FYPI01	70	2339	2103	6/25/17	7/5/17	Scaffold	SC	SAMEA1026408	GCA_900191265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/265/GCA_900191265.1_6512_3_6	-	UoS3200
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03521	39.7	-	FYPJ01	55	2296	2004	6/25/17	7/5/17	Scaffold	SC	SAMEA1026481	GCA_900191285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/285/GCA_900191285.1_6512_3_7	-	UoS3205
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.72897	32.8	-	FKRZ01	16	2845	2699	5/18/16	3/6/17	Scaffold	SC	SAMEA2384480	GCA_900081885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/885/GCA_900081885.1_12673_1_68	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.88839	32.8	-	FKSA01	27	3029	2904	5/18/16	3/6/17	Scaffold	SC	SAMEA2384487	GCA_900081895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/895/GCA_900081895.1_12673_1_75	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10541	39.6	-	FYPM01	40	2307	2077	6/25/17	7/5/17	Scaffold	SC	SAMEA1026802	GCA_900191315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/315/GCA_900191315.1_6512_3_10	-	UoS3225
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07429	39.6	-	FYPN01	73	2317	2029	6/25/17	7/5/17	Scaffold	SC	SAMEA1026789	GCA_900191325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/325/GCA_900191325.1_6512_3_11	-	UoS3226
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.80148	32.7	-	FKSB01	14	2907	2790	5/18/16	3/6/17	Scaffold	SC	SAMEA2384495	GCA_900081905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/905/GCA_900081905.1_12673_1_83	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.73558	32.7	-	FKSC01	15	2878	2711	5/18/16	3/6/17	Scaffold	SC	SAMEA2384502	GCA_900081915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/915/GCA_900081915.1_12673_1_90	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.12005	39.6	-	FYPP01	50	2347	2112	6/25/17	7/5/17	Scaffold	SC	SAMEA1026834	GCA_900191335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/335/GCA_900191335.1_6512_3_12	-	UoS3227
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10598	39.5	-	FYPO01	67	2301	2052	6/25/17	7/5/17	Scaffold	SC	SAMEA1026321	GCA_900191355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/355/GCA_900191355.1_6512_3_14	-	UoS3234
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.7416	32.7	-	FKSD01	16	2872	2712	5/18/16	3/6/17	Scaffold	SC	SAMEA2384503	GCA_900081925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/925/GCA_900081925.1_12673_1_91	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.74407	32.8	-	FKSE01	11	2851	2694	5/18/16	3/6/17	Scaffold	SC	SAMEA2384518	GCA_900081935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/935/GCA_900081935.1_12673_2_11	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.0671	39.6	-	FYPT01	38	2269	2031	6/25/17	7/5/17	Scaffold	SC	SAMEA1026341	GCA_900191375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/375/GCA_900191375.1_6512_3_16	-	UoS3240
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.97734	39.8	-	FYPW01	51	2167	1932	6/25/17	7/5/17	Scaffold	SC	SAMEA1026356	GCA_900191385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/385/GCA_900191385.1_6512_3_17	-	UoS3245
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.87445	32.7	-	FKSI01	42	3034	2841	5/18/16	3/6/17	Scaffold	SC	SAMEA2384522	GCA_900081945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/945/GCA_900081945.1_12673_2_15	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.774	32.7	-	FKSF01	23	2915	2749	5/18/16	3/6/17	Scaffold	SC	SAMEA2384526	GCA_900081955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/955/GCA_900081955.1_12673_2_19	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.04351	39.7	-	FYPV01	110	2242	2011	6/25/17	7/5/17	Scaffold	SC	SAMEA1026374	GCA_900191395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/395/GCA_900191395.1_6512_3_18	-	UoS3247
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05155	39.6	-	FYPY01	40	2209	1999	6/25/17	7/5/17	Scaffold	SC	SAMEA1026576	GCA_900191405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/405/GCA_900191405.1_6512_3_21	-	UoS3250
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.75774	32.8	-	FKSH01	19	2862	2702	5/18/16	3/6/17	Scaffold	SC	SAMEA2384519	GCA_900081965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/965/GCA_900081965.1_12673_2_12	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.85935	32.7	-	FKSG01	10	3020	2857	5/18/16	3/6/17	Scaffold	SC	SAMEA2384527	GCA_900081975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/975/GCA_900081975.1_12673_2_20	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06773	39.6	-	FYPS01	35	2261	2039	6/25/17	7/5/17	Scaffold	SC	SAMEA1026381	GCA_900191415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/415/GCA_900191415.1_6512_3_19	-	UoS3248
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06008	39.6	-	FYPX01	39	2262	2030	6/25/17	7/5/17	Scaffold	SC	SAMEA1026585	GCA_900191435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/435/GCA_900191435.1_6512_3_20	-	UoS3249
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.75882	32.7	-	FKSM01	13	2869	2742	5/18/16	3/6/17	Scaffold	SC	SAMEA2384530	GCA_900081985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/985/GCA_900081985.1_12673_2_23	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.81549	32.7	-	FKSK01	26	2916	2795	5/18/16	3/6/17	Scaffold	SC	SAMEA2384531	GCA_900081995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/081/995/GCA_900081995.1_12673_2_24	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.053	39.5	-	FYPZ01	32	2254	2044	6/25/17	7/5/17	Scaffold	SC	SAMEA1026800	GCA_900191445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/445/GCA_900191445.1_6512_3_24	-	UoS3255
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.11467	39.5	-	FYQF01	74	2295	2053	6/25/17	7/5/17	Scaffold	SC	SAMEA1026782	GCA_900191475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/475/GCA_900191475.1_6512_4_3	-	UoS3258
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.80515	32.7	-	FKSL01	15	2961	2798	5/18/16	3/6/17	Scaffold	SC	SAMEA2384534	GCA_900082005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/005/GCA_900082005.1_12673_2_27	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.80534	32.7	-	FKSJ01	18	2963	2797	5/18/16	3/6/17	Scaffold	SC	SAMEA2384535	GCA_900082015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/015/GCA_900082015.1_12673_2_28	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07638	39.6	-	FYQP01	42	2259	2036	6/25/17	7/5/17	Scaffold	SC	SAMEA1026784	GCA_900191485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/485/GCA_900191485.1_6512_4_8	-	UoS3277
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.97731	39.8	-	FYQI01	29	2186	1973	6/25/17	7/5/17	Scaffold	SC	SAMEA1026728	GCA_900191495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/495/GCA_900191495.1_6512_4_14	-	UoS3298
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.80278	32.7	-	FKSN01	16	2932	2777	5/18/16	3/6/17	Scaffold	SC	SAMEA2384510	GCA_900082025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/025/GCA_900082025.1_12673_2_3	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.84474	32.7	-	FKSO01	28	2973	2839	5/18/16	3/6/17	Scaffold	SC	SAMEA2384539	GCA_900082035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/035/GCA_900082035.1_12673_2_32	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05089	39.6	-	FYQC01	21	2255	2040	6/25/17	7/5/17	Scaffold	SC	SAMEA1026801	GCA_900191505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/505/GCA_900191505.1_6512_4_9	-	UoS3283
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05108	39.5	-	FYQX01	50	2218	2003	6/25/17	7/5/17	Scaffold	SC	SAMEA1026668	GCA_900191535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/535/GCA_900191535.1_6512_4_19	-	UoS3315
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.78719	32.7	-	FKSP01	16	2942	2772	5/18/16	3/6/17	Scaffold	SC	SAMEA2384546	GCA_900082045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/045/GCA_900082045.1_12673_2_39	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.71662	32.7	-	FKSQ01	13	2797	2675	5/18/16	3/6/17	Scaffold	SC	SAMEA2384511	GCA_900082055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/055/GCA_900082055.1_12673_2_4	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07574	39.6	-	FYRC01	37	2278	2062	6/25/17	7/5/17	Scaffold	SC	SAMEA1026753	GCA_900191705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/705/GCA_900191705.1_6512_4_4	-	UoS3259
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06339	39.6	-	FYRD01	57	2260	2049	6/25/17	7/5/17	Scaffold	SC	SAMEA1026824	GCA_900191725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/725/GCA_900191725.1_6512_4_11	-	UoS3286
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.8221	32.7	-	FKSS01	44	2970	2806	5/18/16	3/6/17	Scaffold	SC	SAMEA2384550	GCA_900082065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/065/GCA_900082065.1_12673_2_43	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.79563	32.7	-	FKSR01	18	2886	2749	5/18/16	3/6/17	Scaffold	SC	SAMEA2384554	GCA_900082075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/075/GCA_900082075.1_12673_2_47	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05181	39.7	-	FYQH01	54	2277	2054	6/25/17	7/5/17	Scaffold	SC	SAMEA1026457	GCA_900191735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/735/GCA_900191735.1_6512_5_6	-	UoS4024
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.97927	39.7	-	FYRG01	23	2185	1976	6/25/17	7/5/17	Scaffold	SC	SAMEA1026820	GCA_900191745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/745/GCA_900191745.1_6512_5_1	-	UoS4008
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.85251	32.7	-	FKST01	35	3013	2826	5/18/16	3/6/17	Scaffold	SC	SAMEA2384555	GCA_900082085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/085/GCA_900082085.1_12673_2_48	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.73463	32.6	-	FKSU01	10	2870	2698	5/18/16	3/6/17	Scaffold	SC	SAMEA2384558	GCA_900082095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/095/GCA_900082095.1_12673_2_51	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.01598	39.7	-	FYRA01	42	2227	2011	6/25/17	7/5/17	Scaffold	SC	SAMEA1026698	GCA_900191775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/775/GCA_900191775.1_6512_4_17	-	UoS3301
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07809	39.6	-	FYRH01	53	2266	2042	6/25/17	7/5/17	Scaffold	SC	SAMEA1026582	GCA_900191785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/785/GCA_900191785.1_6512_5_9	-	UoS4029
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.79191	32.7	-	FKSV01	19	2947	2788	5/18/16	3/6/17	Scaffold	SC	SAMEA2384559	GCA_900082105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/105/GCA_900082105.1_12673_2_52	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.79243	32.7	-	FKSW01	31	2882	2715	5/18/16	3/6/17	Scaffold	SC	SAMEA2384562	GCA_900082115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/115/GCA_900082115.1_12673_2_55	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10704	39.4	-	FYRK01	53	2303	2070	6/25/17	7/5/17	Scaffold	SC	SAMEA1026407	GCA_900191815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/815/GCA_900191815.1_6512_5_12	-	UoS4039
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09661	39.6	-	FYRL01	56	2307	2056	6/25/17	7/5/17	Scaffold	SC	SAMEA1026437	GCA_900191825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/825/GCA_900191825.1_6512_5_14	-	UoS4049
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.71811	32.7	-	FKSX01	10	2832	2669	5/18/16	3/6/17	Scaffold	SC	SAMEA2384566	GCA_900082125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/125/GCA_900082125.1_12673_2_59	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.72739	32.7	-	FKSY01	11	2849	2677	5/18/16	3/6/17	Scaffold	SC	SAMEA2384567	GCA_900082135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/135/GCA_900082135.1_12673_2_60	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.96938	39.7	-	FYRO01	27	2161	1937	6/25/17	7/5/17	Scaffold	SC	SAMEA1026451	GCA_900191865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/865/GCA_900191865.1_6512_5_17	-	UoS4074
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08781	39.6	-	FYRQ01	47	2319	2075	6/25/17	7/5/17	Scaffold	SC	SAMEA1026503	GCA_900191875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/875/GCA_900191875.1_6512_5_18	-	UoS4076
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.85682	32.7	-	FKSZ01	35	3005	2822	5/18/16	3/6/17	Scaffold	SC	SAMEA2384570	GCA_900082145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/145/GCA_900082145.1_12673_2_63	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.80192	32.7	-	FKTA01	14	2903	2771	5/19/16	3/6/17	Scaffold	SC	SAMEA2384575	GCA_900082155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/155/GCA_900082155.1_12673_2_68	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.12036	39.6	-	FYRT01	28	2328	2115	6/25/17	7/5/17	Scaffold	SC	SAMEA1026476	GCA_900191885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/885/GCA_900191885.1_6512_5_20	-	UoS4081
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.98265	39.7	-	FYRV01	43	2159	1950	6/25/17	7/5/17	Scaffold	SC	SAMEA1026810	GCA_900191915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/915/GCA_900191915.1_6512_5_22	-	UoS4083
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.8089	32.7	-	FKTD01	19	2936	2783	5/18/16	3/6/17	Scaffold	SC	SAMEA2384514	GCA_900082165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/165/GCA_900082165.1_12673_2_7	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.72885	32.7	-	FKTB01	14	2829	2669	5/18/16	3/6/17	Scaffold	SC	SAMEA2384579	GCA_900082175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/175/GCA_900082175.1_12673_2_72	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08365	39.6	-	FYRX01	60	2297	2043	6/25/17	7/5/17	Scaffold	SC	SAMEA1026371	GCA_900191955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/191/955/GCA_900191955.1_6512_6_2	-	UoS4087
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08046	39.5	-	FYSD01	54	2317	2065	6/25/17	7/5/17	Scaffold	SC	SAMEA1026599	GCA_900192035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/035/GCA_900192035.1_6512_6_14	-	UoS4139
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.74176	32.8	-	FKTC01	13	2893	2730	5/18/16	3/6/17	Scaffold	SC	SAMEA2384583	GCA_900082185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/185/GCA_900082185.1_12673_2_76	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.81165	32.7	-	FKTE01	18	2903	2776	5/18/16	3/6/17	Scaffold	SC	SAMEA2384587	GCA_900082195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/195/GCA_900082195.1_12673_2_80	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.97583	39.8	-	FYSM01	73	2184	1915	6/25/17	7/5/17	Scaffold	SC	SAMEA1026619	GCA_900192045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/045/GCA_900192045.1_6512_6_16	-	UoS4151
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06702	39.7	-	FYSI01	57	2254	2011	6/25/17	7/5/17	Scaffold	SC	SAMEA1026795	GCA_900192115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/115/GCA_900192115.1_6512_6_20	-	UoS4165
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.77245	32.8	-	FKTF01	36	2902	2688	5/18/16	3/6/17	Scaffold	SC	SAMEA2384594	GCA_900082205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/205/GCA_900082205.1_12673_2_87	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.7267	32.7	-	FKTI01	17	2837	2674	5/18/16	3/6/17	Scaffold	SC	SAMEA2384589	GCA_900082215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/215/GCA_900082215.1_12673_2_82	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10148	39.6	-	FYSY01	61	2296	2095	6/25/17	7/5/17	Scaffold	SC	SAMEA1026748	GCA_900192285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/285/GCA_900192285.1_6512_7_15	-	UoS4242
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.11442	39.5	-	FYTL01	80	2303	2054	6/25/17	7/5/17	Scaffold	SC	SAMEA1026803	GCA_900192325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/325/GCA_900192325.1_6512_7_16	-	UoS4245
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.75692	32.8	-	FKTH01	18	2892	2728	5/18/16	3/6/17	Scaffold	SC	SAMEA2384595	GCA_900082225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/225/GCA_900082225.1_12673_2_88	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.89591	32.8	-	FKTG01	24	3074	2920	5/18/16	3/6/17	Scaffold	SC	SAMEA2384597	GCA_900082235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/235/GCA_900082235.1_12673_2_90	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10127	39.5	-	FYTK01	22	2291	2050	6/25/17	7/5/17	Scaffold	SC	SAMEA1026344	GCA_900192335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/335/GCA_900192335.1_6512_7_20	-	UoS4265
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07035	39.6	-	FYTJ01	57	2295	2071	6/25/17	7/5/17	Scaffold	SC	SAMEA1026376	GCA_900192355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/355/GCA_900192355.1_6512_7_22	-	UoS4270
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.79701	32.7	-	FKTK01	24	2941	2776	5/18/16	3/6/17	Scaffold	SC	SAMEA2384601	GCA_900082245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/245/GCA_900082245.1_12673_2_94	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.72547	32.7	-	FKTL01	20	2808	2687	5/18/16	3/6/17	Scaffold	SC	SAMEA2384602	GCA_900082255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/255/GCA_900082255.1_12673_2_95	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10164	39.7	-	FYTP01	68	2327	2060	6/25/17	7/5/17	Scaffold	SC	SAMEA1026567	GCA_900192385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/385/GCA_900192385.1_6569_8_17	-	UoS5108
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10536	39.6	-	FYTS01	68	2294	2100	6/25/17	7/5/17	Scaffold	SC	SAMEA1026512	GCA_900192425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/425/GCA_900192425.1_6486_5_11	-	UoS4310
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.71524	32.7	-	FKTJ01	19	2831	2675	5/18/16	3/6/17	Scaffold	SC	SAMEA2384612	GCA_900082265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/265/GCA_900082265.1_12673_3_10	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.79809	32.7	-	FKTM01	18	2917	2797	5/18/16	3/6/17	Scaffold	SC	SAMEA2384616	GCA_900082275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/275/GCA_900082275.1_12673_3_14	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09507	39.6	-	FYTU01	37	2300	2063	6/25/17	7/5/17	Scaffold	SC	SAMEA1026563	GCA_900192435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/435/GCA_900192435.1_6486_5_10	-	UoS4300
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06095	39.6	-	FYTX01	63	2255	2038	6/25/17	7/5/17	Scaffold	SC	SAMEA1026523	GCA_900192445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/445/GCA_900192445.1_6486_5_12	-	UoS4311
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.75817	32.8	-	FKTN01	12	2866	2707	5/18/16	3/6/17	Scaffold	SC	SAMEA2384620	GCA_900082285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/285/GCA_900082285.1_12673_3_18	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.75895	32.8	-	FKTO01	14	2871	2706	5/18/16	3/6/17	Scaffold	SC	SAMEA2384605	GCA_900082295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/295/GCA_900082295.1_12673_3_3	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.02416	39.6	-	FYTZ01	37	2221	2002	6/25/17	7/5/17	Scaffold	SC	SAMEA1026352	GCA_900192455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/455/GCA_900192455.1_6486_5_14	-	UoS4318
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.12553	39.6	-	FYUC01	33	2326	2110	6/25/17	7/5/17	Scaffold	SC	SAMEA1026771	GCA_900192525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/525/GCA_900192525.1_6486_5_22	-	UoS4342
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.86127	32.8	-	FKTQ01	37	3010	2886	5/18/16	3/6/17	Scaffold	SC	SAMEA2384644	GCA_900082305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/305/GCA_900082305.1_12673_3_42	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.7943	32.6	-	FKTP01	10	2936	2768	5/18/16	3/6/17	Scaffold	SC	SAMEA2384606	GCA_900082315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/315/GCA_900082315.1_12673_3_4	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07378	39.6	-	FYUH01	45	2270	2034	6/25/17	7/5/17	Scaffold	SC	SAMEA1026730	GCA_900192535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/535/GCA_900192535.1_6486_5_20	-	UoS4338
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.99237	39.7	-	FYUD01	36	2178	1975	6/25/17	7/5/17	Scaffold	SC	SAMEA1026709	GCA_900192555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/555/GCA_900192555.1_6486_5_21	-	UoS4339
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.69727	32.8	-	FKTR01	25	2789	2613	5/18/16	3/6/17	Scaffold	SC	SAMEA2384651	GCA_900082325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/325/GCA_900082325.1_12673_3_49	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.80892	32.7	-	FKTT01	30	2956	2761	5/18/16	3/6/17	Scaffold	SC	SAMEA2384659	GCA_900082335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/335/GCA_900082335.1_12673_3_57	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.02318	39.6	-	FYUL01	37	2224	2008	6/25/17	7/5/17	Scaffold	SC	SAMEA1026338	GCA_900192585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/585/GCA_900192585.1_6486_6_4	-	UoS4356
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08765	39.5	-	FYUK01	53	2278	2046	6/25/17	7/5/17	Scaffold	SC	SAMEA1026435	GCA_900192595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/595/GCA_900192595.1_6486_6_6	-	UoS4362
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.72149	32.8	-	FKTS01	11	2818	2665	5/18/16	3/6/17	Scaffold	SC	SAMEA2384668	GCA_900082345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/345/GCA_900082345.1_12673_3_66	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.8319	32.7	-	FKTU01	22	2957	2832	5/18/16	3/6/17	Scaffold	SC	SAMEA2384679	GCA_900082355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/355/GCA_900082355.1_12673_3_77	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07842	39.5	-	FYUM01	26	2244	2035	6/25/17	7/5/17	Scaffold	SC	SAMEA1026390	GCA_900192615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/615/GCA_900192615.1_6486_6_7	-	UoS4364
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08743	39.7	-	FYVE01	24	2306	2086	6/25/17	7/5/17	Scaffold	SC	SAMEA1026348	GCA_900192715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/715/GCA_900192715.1_6486_6_20	-	UoS4388
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.71077	32.7	-	FKTV01	29	2792	2598	5/18/16	3/6/17	Scaffold	SC	SAMEA2384687	GCA_900082365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/365/GCA_900082365.1_12673_3_85	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.83415	32.8	-	FKTW01	17	2976	2835	5/18/16	3/6/17	Scaffold	SC	SAMEA2384708	GCA_900082375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/375/GCA_900082375.1_12673_4_11	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.01673	39.7	-	FYUW01	58	2217	1996	6/25/17	7/5/17	Scaffold	SC	SAMEA1026633	GCA_900192745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/745/GCA_900192745.1_6569_8_12	-	UoS5079
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10527	39.6	-	FYVL01	63	2303	2076	6/25/17	7/5/17	Scaffold	SC	SAMEA1026445	GCA_900192815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/815/GCA_900192815.1_6569_8_14	-	UoS5083
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.73551	32.7	-	FKTX01	15	2852	2688	5/18/16	3/6/17	Scaffold	SC	SAMEA2384716	GCA_900082385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/385/GCA_900082385.1_12673_4_19	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.71177	32.7	-	FKTY01	29	2787	2598	5/18/16	3/6/17	Scaffold	SC	SAMEA2384700	GCA_900082395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/395/GCA_900082395.1_12673_4_3	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06915	39.6	-	FYVB01	77	2275	1969	6/25/17	7/5/17	Scaffold	SC	SAMEA1026498	GCA_900192835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/835/GCA_900192835.1_6569_8_13	-	UoS5080
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05536	39.7	-	FYVJ01	60	2293	2071	6/25/17	7/5/17	Scaffold	SC	SAMEA1026739	GCA_900192845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/845/GCA_900192845.1_6512_7_12	-	UoS4226
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.87396	32.8	-	FKUA01	55	3054	2855	5/18/16	3/6/17	Scaffold	SC	SAMEA2384732	GCA_900082405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/405/GCA_900082405.1_12673_4_35	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.86739	32.8	-	FKUD01	46	3047	2853	5/18/16	3/6/17	Scaffold	SC	SAMEA2384740	GCA_900082415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/415/GCA_900082415.1_12673_4_43	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.11186	39.6	-	FYVM01	67	2323	2070	6/25/17	7/5/17	Scaffold	SC	SAMEA1026713	GCA_900192885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/885/GCA_900192885.1_6486_7_10	-	UoS5021
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10559	39.5	-	FYVZ01	34	2317	2084	6/25/17	7/5/17	Scaffold	SC	SAMEA1026703	GCA_900192985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/192/985/GCA_900192985.1_6486_7_20	-	UoS5043
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.86833	32.8	-	FKUC01	40	3022	2837	5/18/16	3/6/17	Scaffold	SC	SAMEA2384748	GCA_900082425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/425/GCA_900082425.1_12673_4_51	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.7573	32.8	-	FKUB01	16	2883	2723	5/18/16	3/6/17	Scaffold	SC	SAMEA2384803	GCA_900082435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/435/GCA_900082435.1_12673_5_11	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03165	39.6	-	FYVY01	56	2213	2001	6/25/17	7/5/17	Scaffold	SC	SAMEA1026754	GCA_900193015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/015/GCA_900193015.1_6486_7_22	-	UoS5050
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10149	39.6	-	FYWB01	68	2296	2020	6/25/17	7/5/17	Scaffold	SC	SAMEA1026799	GCA_900193025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/025/GCA_900193025.1_6569_8_2	-	UoS5053
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.69419	32.8	-	FKTZ01	10	2816	2664	5/18/16	3/6/17	Scaffold	SC	SAMEA2384802	GCA_900082445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/445/GCA_900082445.1_12673_5_10	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.8351	32.8	-	FKUF01	20	2970	2794	5/18/16	3/6/17	Scaffold	SC	SAMEA2384804	GCA_900082455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/455/GCA_900082455.1_12673_5_12	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05099	39.6	-	FYWC01	31	2252	2036	6/25/17	7/5/17	Scaffold	SC	SAMEA1026565	GCA_900193035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/035/GCA_900193035.1_6569_8_3	-	UoS5057
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05131	39.6	-	FYWD01	67	2272	1980	6/25/17	7/5/17	Scaffold	SC	SAMEA1026617	GCA_900193045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/045/GCA_900193045.1_6569_8_4	-	UoS5059
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.71894	32.8	-	FKUE01	13	2809	2640	5/18/16	3/6/17	Scaffold	SC	SAMEA2384805	GCA_900082465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/465/GCA_900082465.1_12673_5_13	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.76231	32.7	-	FKUG01	34	2899	2744	5/18/16	3/6/17	Scaffold	SC	SAMEA2384809	GCA_900082475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/475/GCA_900082475.1_12673_5_17	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05489	39.5	-	FYWG01	56	2202	1994	6/25/17	7/5/17	Scaffold	SC	SAMEA1026604	GCA_900193055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/055/GCA_900193055.1_6569_8_5	-	UoS5061
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09621	39.5	-	FYWE01	76	2298	2067	6/25/17	7/5/17	Scaffold	SC	SAMEA1026596	GCA_900193065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/065/GCA_900193065.1_6569_8_7	-	UoS5065
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.83154	32.7	-	FKUI01	32	2959	2830	5/18/16	3/6/17	Scaffold	SC	SAMEA2384810	GCA_900082485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/485/GCA_900082485.1_12673_5_18	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.73978	32.7	-	FKUH01	18	2812	2684	5/18/16	3/6/17	Scaffold	SC	SAMEA2384811	GCA_900082495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/495/GCA_900082495.1_12673_5_19	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07833	39.6	-	FYWF01	68	2266	2020	6/25/17	7/5/17	Scaffold	SC	SAMEA1026592	GCA_900193075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/075/GCA_900193075.1_6569_8_6	-	UoS5062
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.98817	39.7	-	FYWI01	50	2192	1943	6/25/17	7/5/17	Scaffold	SC	SAMEA1026581	GCA_900193085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/085/GCA_900193085.1_6569_8_8	-	UoS5066
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.73648	32.8	-	FKUJ01	14	2836	2688	5/18/16	3/6/17	Scaffold	SC	SAMEA2384812	GCA_900082505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/505/GCA_900082505.1_12673_5_20	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.86526	32.7	-	FKUK01	13	2998	2862	5/18/16	3/6/17	Scaffold	SC	SAMEA2384813	GCA_900082515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/515/GCA_900082515.1_12673_5_21	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08372	39.5	-	FYWJ01	93	2278	2028	6/25/17	7/5/17	Scaffold	SC	SAMEA1026697	GCA_900193095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/095/GCA_900193095.1_6569_8_9	-	UoS5068
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08698	39.6	-	FYWK01	74	2279	2067	6/25/17	7/5/17	Scaffold	SC	SAMEA1026673	GCA_900193105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/105/GCA_900193105.1_6569_8_10	-	UoS5072
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.68545	32.7	-	FKUM01	10	2779	2626	5/18/16	3/6/17	Scaffold	SC	SAMEA2384814	GCA_900082525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/525/GCA_900082525.1_12673_5_22	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.85096	32.7	-	FKUL01	19	2967	2832	5/18/16	3/6/17	Scaffold	SC	SAMEA2384818	GCA_900082535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/535/GCA_900082535.1_12673_5_26	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.0648	39.6	-	FYWH01	58	2230	2010	6/25/17	7/5/17	Scaffold	SC	SAMEA1026655	GCA_900193115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/115/GCA_900193115.1_6569_8_11	-	UoS5074
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.10249	39.5	-	FYWM01	58	2317	2055	6/25/17	7/5/17	Scaffold	SC	SAMEA1026465	GCA_900193135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/135/GCA_900193135.1_6569_8_15	-	UoS5089
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.85334	32.7	-	FKUP01	23	2978	2853	5/18/16	3/6/17	Scaffold	SC	SAMEA2384819	GCA_900082545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/545/GCA_900082545.1_12673_5_27	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.82321	32.7	-	FKUO01	28	2987	2823	5/18/16	3/6/17	Scaffold	SC	SAMEA2384820	GCA_900082555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/555/GCA_900082555.1_12673_5_28	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03584	39.7	-	FYWN01	53	2253	2024	6/25/17	7/5/17	Scaffold	SC	SAMEA1026525	GCA_900193155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/155/GCA_900193155.1_6569_8_20	-	UoS5113
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.0141	39.7	-	FYXB01	45	2207	1991	6/25/17	7/5/17	Scaffold	SC	SAMEA1026796	GCA_900193175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/175/GCA_900193175.1_6569_8_21	-	UoS5114
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.8414	32.8	-	FKUN01	17	2968	2801	5/18/16	3/6/17	Scaffold	SC	SAMEA2384821	GCA_900082565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/565/GCA_900082565.1_12673_5_29	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.81398	32.7	-	FKUR01	20	2903	2787	5/18/16	3/6/17	Scaffold	SC	SAMEA2384823	GCA_900082575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/575/GCA_900082575.1_12673_5_31	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05746	39.6	-	FYWV01	164	2216	1998	6/25/17	7/5/17	Scaffold	SC	SAMEA1026574	GCA_900193265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/265/GCA_900193265.1_6486_8_11	-	UoS5144
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.046	39.6	-	FYWY01	31	2235	2007	6/25/17	7/5/17	Scaffold	SC	SAMEA1026587	GCA_900193325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/325/GCA_900193325.1_6486_8_12	-	UoS5149
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.75452	32.7	-	FKUQ01	20	2849	2725	5/18/16	3/6/17	Scaffold	SC	SAMEA2384827	GCA_900082585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/585/GCA_900082585.1_12673_5_35	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.75069	32.7	-	FKUS01	35	2851	2662	5/18/16	3/6/17	Scaffold	SC	SAMEA2384826	GCA_900082595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/595/GCA_900082595.1_12673_5_34	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07739	39.6	-	FYXJ01	30	2287	2041	6/25/17	7/5/17	Scaffold	SC	SAMEA1026589	GCA_900193375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/375/GCA_900193375.1_6569_7_1	-	UoS5178
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09254	39.6	-	FYXK01	32	2311	2064	6/25/17	7/5/17	Scaffold	SC	SAMEA1026602	GCA_900193385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/385/GCA_900193385.1_6569_7_2	-	UoS5180
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.831	32.8	-	FKUT01	19	2957	2832	5/18/16	3/6/17	Scaffold	SC	SAMEA2384829	GCA_900082605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/605/GCA_900082605.1_12673_5_37	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.90304	32.8	-	FKUU01	50	3052	2913	5/18/16	3/6/17	Scaffold	SC	SAMEA2384828	GCA_900082615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/615/GCA_900082615.1_12673_5_36	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08667	39.6	-	FYXN01	59	2291	2056	6/25/17	7/5/17	Scaffold	SC	SAMEA1026705	GCA_900193395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/395/GCA_900193395.1_6569_7_9	-	UoS5203
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07603	39.9	-	FYXO01	141	2326	1896	6/25/17	7/5/17	Scaffold	SC	SAMEA1026660	GCA_900193405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/405/GCA_900193405.1_6569_7_5	-	UoS5189
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.75898	32.7	-	FKUW01	18	2842	2712	5/18/16	3/6/17	Scaffold	SC	SAMEA2384830	GCA_900082625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/625/GCA_900082625.1_12673_5_38	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.76446	32.7	-	FKUV01	32	2880	2686	5/18/16	3/6/17	Scaffold	SC	SAMEA2384834	GCA_900082635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/635/GCA_900082635.1_12673_5_42	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.13904	39.6	-	FYXT01	88	2395	2151	6/25/17	7/5/17	Scaffold	SC	SAMEA1026669	GCA_900193415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/415/GCA_900193415.1_6569_7_7	-	UoS5193
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.96334	39.8	-	FYXW01	67	2158	1912	6/25/17	7/5/17	Scaffold	SC	SAMEA1026793	GCA_900193425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/425/GCA_900193425.1_6569_7_14	-	UoS5220
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.8377	32.7	-	FKUX01	29	2942	2810	5/19/16	3/6/17	Scaffold	SC	SAMEA2384831	GCA_900082645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/645/GCA_900082645.1_12673_5_39	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.92215	32.8	-	FKVB01	47	3087	2951	5/18/16	3/6/17	Scaffold	SC	SAMEA2384833	GCA_900082655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/655/GCA_900082655.1_12673_5_41	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.11244	39.6	-	FYXQ01	61	2333	2080	6/25/17	7/5/17	Scaffold	SC	SAMEA1026828	GCA_900193435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/435/GCA_900193435.1_6569_7_12	-	UoS5217
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05175	39.6	-	FYXM01	48	2252	2028	6/25/17	7/5/17	Scaffold	SC	SAMEA1026641	GCA_900193445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/445/GCA_900193445.1_6569_7_4	-	UoS5186
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.93326	32.8	-	FKVC01	65	3105	2941	5/18/16	3/6/17	Scaffold	SC	SAMEA2384796	GCA_900082665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/665/GCA_900082665.1_12673_5_4	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.82308	32.8	-	FKUZ01	19	2944	2819	5/18/16	3/6/17	Scaffold	SC	SAMEA2384835	GCA_900082675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/675/GCA_900082675.1_12673_5_43	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.0648	39.6	-	FYXS01	65	2248	2036	6/25/17	7/5/17	Scaffold	SC	SAMEA1026819	GCA_900193455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/455/GCA_900193455.1_6569_7_11	-	UoS5209
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03677	39.7	-	FYXR01	45	2232	1997	6/25/17	7/5/17	Scaffold	SC	SAMEA1026686	GCA_900193465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/465/GCA_900193465.1_6569_7_6	-	UoS5191
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.8264	32.7	-	FKVA01	16	2921	2794	5/18/16	3/6/17	Scaffold	SC	SAMEA2384836	GCA_900082685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/685/GCA_900082685.1_12673_5_44	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.82714	32.7	-	FKUY01	19	2951	2830	5/18/16	3/6/17	Scaffold	SC	SAMEA2384837	GCA_900082695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/695/GCA_900082695.1_12673_5_45	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.02009	39.6	-	FYXU01	40	2235	1981	6/25/17	7/5/17	Scaffold	SC	SAMEA1026835	GCA_900193475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/475/GCA_900193475.1_6569_7_13	-	UoS5218
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.02577	39.6	-	FYXP01	109	2203	1978	6/25/17	7/5/17	Scaffold	SC	SAMEA1026809	GCA_900193485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/485/GCA_900193485.1_6569_7_15	-	UoS5222
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.81321	32.7	-	FKVD01	21	2913	2782	5/18/16	3/6/17	Scaffold	SC	SAMEA2384839	GCA_900082705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/705/GCA_900082705.1_12673_5_47	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.73555	32.7	-	FKVE01	12	2868	2708	5/18/16	3/6/17	Scaffold	SC	SAMEA2384841	GCA_900082715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/715/GCA_900082715.1_12673_5_49	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03862	39.6	-	FYXX01	59	2231	1999	6/25/17	7/5/17	Scaffold	SC	SAMEA1026613	GCA_900193505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/505/GCA_900193505.1_6569_7_16	-	UoS5225
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.15957	39.4	-	FYYA01	28	2393	2139	6/25/17	7/5/17	Scaffold	SC	SAMEA1026405	GCA_900193525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/525/GCA_900193525.1_6570_1_19	-	UoS5232
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.9043	32.7	-	FKVF01	42	3078	2887	5/18/16	3/6/17	Scaffold	SC	SAMEA2384797	GCA_900082725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/725/GCA_900082725.1_12673_5_5	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.75538	32.7	-	FKVG01	39	2857	2667	5/18/16	3/6/17	Scaffold	SC	SAMEA2384844	GCA_900082735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/735/GCA_900082735.1_12673_5_52	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.95477	39.8	-	FYYB01	45	2121	1919	6/25/17	7/5/17	Scaffold	SC	SAMEA1026620	GCA_900193535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/535/GCA_900193535.1_6569_7_18	-	UoS5227
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.02726	39.6	-	FYXZ01	45	2225	1998	6/25/17	7/5/17	Scaffold	SC	SAMEA1026427	GCA_900193545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/545/GCA_900193545.1_6569_7_19	-	UoS5233
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.77219	32.7	-	FKVH01	17	2866	2752	5/18/16	3/6/17	Scaffold	SC	SAMEA2384845	GCA_900082745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/745/GCA_900082745.1_12673_5_53	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.79119	32.7	-	FKVI01	22	2885	2766	5/18/16	3/6/17	Scaffold	SC	SAMEA2384849	GCA_900082755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/755/GCA_900082755.1_12673_5_57	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07755	39.5	-	FYYD01	45	2275	2041	6/25/17	7/5/17	Scaffold	SC	SAMEA1026392	GCA_900193565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/565/GCA_900193565.1_6570_1_1	-	UoS5243
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06043	39.5	-	FYYG01	55	2230	2008	6/25/17	7/5/17	Scaffold	SC	SAMEA1026403	GCA_900193575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/575/GCA_900193575.1_6569_7_21	-	UoS5235
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.83233	32.7	-	FKVJ01	21	2969	2830	5/18/16	3/6/17	Scaffold	SC	SAMEA2384850	GCA_900082765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/765/GCA_900082765.1_12673_5_58	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.72833	32.7	-	FKVL01	16	2843	2679	5/18/16	3/6/17	Scaffold	SC	SAMEA2384798	GCA_900082775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/775/GCA_900082775.1_12673_5_6	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.0533	39.6	-	FYYH01	23	2283	2029	6/25/17	7/5/17	Scaffold	SC	SAMEA1026386	GCA_900193585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/585/GCA_900193585.1_6570_1_2	-	UoS5247
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	1.98406	39.7	-	FYYE01	28	2190	1975	6/25/17	7/5/17	Scaffold	SC	SAMEA1026781	GCA_900193595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/595/GCA_900193595.1_6570_1_3	-	UoS5248
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.82837	32.8	-	FKVK01	16	2950	2819	5/18/16	3/6/17	Scaffold	SC	SAMEA2384852	GCA_900082785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/785/GCA_900082785.1_12673_5_60	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.88363	32.7	-	FKVN01	45	3036	2878	5/18/16	3/6/17	Scaffold	SC	SAMEA2384853	GCA_900082795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/795/GCA_900082795.1_12673_5_61	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.07576	39.6	-	FYYF01	46	2272	2041	6/25/17	7/5/17	Scaffold	SC	SAMEA1026706	GCA_900193605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/605/GCA_900193605.1_6570_1_6	-	UoS5259
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.0569	39.6	-	FYYI01	19	2268	2044	6/25/17	7/5/17	Scaffold	SC	SAMEA1026830	GCA_900193615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/615/GCA_900193615.1_6570_1_7	-	UoS5262
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.67358	32.7	-	FKVM01	16	2759	2612	5/18/16	3/6/17	Scaffold	SC	SAMEA2384856	GCA_900082805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/805/GCA_900082805.1_12673_5_64	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.78337	32.8	-	FKVO01	19	2884	2767	5/18/16	3/6/17	Scaffold	SC	SAMEA2384857	GCA_900082815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/815/GCA_900082815.1_12673_5_65	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.00591	39.7	-	FYYJ01	27	2206	1969	6/25/17	7/5/17	Scaffold	SC	SAMEA1026431	GCA_900193625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/625/GCA_900193625.1_6570_1_8	-	UoS5263
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.08177	39.5	-	FYYL01	47	2275	2048	6/25/17	7/5/17	Scaffold	SC	SAMEA1026373	GCA_900193635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/635/GCA_900193635.1_6570_1_9	-	UoS5269
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.77828	32.7	-	FKVP01	41	2916	2724	5/18/16	3/6/17	Scaffold	SC	SAMEA2384855	GCA_900082825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/825/GCA_900082825.1_12673_5_63	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.7771	32.8	-	FKVQ01	45	2907	2781	5/18/16	3/6/17	Scaffold	SC	SAMEA2384858	GCA_900082835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/835/GCA_900082835.1_12673_5_66	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06296	39.6	-	FYYK01	39	2274	2029	6/25/17	7/5/17	Scaffold	SC	SAMEA1026777	GCA_900193645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/645/GCA_900193645.1_6570_1_10	-	UoS5270
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.11418	39.5	-	FYYM01	26	2330	2083	6/25/17	7/5/17	Scaffold	SC	SAMEA1026759	GCA_900193655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/655/GCA_900193655.1_6570_1_11	-	UoS5271
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.9288	32.8	-	FKVT01	65	3090	2933	5/18/16	3/6/17	Scaffold	SC	SAMEA2384860	GCA_900082845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/845/GCA_900082845.1_12673_5_68	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.75389	32.8	-	FKVR01	12	2857	2738	5/18/16	3/6/17	Scaffold	SC	SAMEA2384861	GCA_900082855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/855/GCA_900082855.1_12673_5_69	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.02803	39.8	-	FYYS01	59	2219	2026	6/25/17	7/5/17	Scaffold	SC	SAMEA1026729	GCA_900193665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/665/GCA_900193665.1_6570_1_13	-	UoS5275
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.06441	39.5	-	FYYO01	27	2283	2039	6/25/17	7/5/17	Scaffold	SC	SAMEA1026710	GCA_900193675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/675/GCA_900193675.1_6570_1_14	-	UoS5276
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.77629	32.7	-	FKVV01	17	2871	2752	5/18/16	3/6/17	Scaffold	SC	SAMEA2384799	GCA_900082865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/865/GCA_900082865.1_12673_5_7	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.76725	32.7	-	FKVS01	13	2935	2757	5/18/16	3/6/17	Scaffold	SC	SAMEA2384863	GCA_900082875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/875/GCA_900082875.1_12673_5_71	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09518	39.6	-	FYYQ01	57	2298	2064	6/25/17	7/5/17	Scaffold	SC	SAMEA1026744	GCA_900193685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/685/GCA_900193685.1_6570_1_12	-	UoS5274
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.09802	39.6	-	FYYN01	26	2314	2075	6/25/17	7/5/17	Scaffold	SC	SAMEA1026514	GCA_900193695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/695/GCA_900193695.1_6570_1_16	-	UoS5285
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.90303	32.8	-	FKVW01	39	3062	2929	5/18/16	3/6/17	Scaffold	SC	SAMEA2384865	GCA_900082885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/885/GCA_900082885.1_12673_5_73	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.83474	32.7	-	FKVX01	28	2958	2831	5/18/16	3/6/17	Scaffold	SC	SAMEA2384866	GCA_900082895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/895/GCA_900082895.1_12673_5_74	-	MRSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.12176	39.5	-	FYYP01	44	2326	2107	6/25/17	7/5/17	Scaffold	SC	SAMEA1026520	GCA_900193705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/705/GCA_900193705.1_6570_1_15	-	UoS5284
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.15507	39.6	-	FYYR01	67	2372	2140	6/25/17	7/5/17	Scaffold	SC	SAMEA1026531	GCA_900193715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/715/GCA_900193715.1_6570_1_17	-	UoS5287
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.84117	32.8	-	FKVU01	15	2971	2798	5/18/16	3/6/17	Scaffold	SC	SAMEA2384868	GCA_900082905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/905/GCA_900082905.1_12673_5_76	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.85048	32.8	-	FKVY01	29	3018	2859	5/18/16	3/6/17	Scaffold	SC	SAMEA2384869	GCA_900082915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/915/GCA_900082915.1_12673_5_77	-	MSSA
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.05511	39.5	-	FYYT01	34	2229	2042	6/25/17	7/5/17	Scaffold	SC	SAMEA1026357	GCA_900193725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/725/GCA_900193725.1_6570_1_18	-	UoS5288
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.09758	39.6	-	FYYX01	38	2338	2108	6/25/17	7/5/17	Scaffold	SC	SAMEA2626741	GCA_900193735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/735/GCA_900193735.1_13682_1_1	-	3063STDY5801662
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.80979	32.7	-	FKVZ01	19	2939	2785	5/18/16	3/6/17	Scaffold	SC	SAMEA2384870	GCA_900082925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/925/GCA_900082925.1_12673_5_78	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.67241	32.7	-	FKWA01	17	2765	2614	5/18/16	3/6/17	Scaffold	SC	SAMEA2384800	GCA_900082935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/935/GCA_900082935.1_12673_5_8	-	MRSA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.05287	39.6	-	FYYU01	35	2250	2004	6/25/17	7/5/17	Scaffold	SC	SAMEA2626743	GCA_900193745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/745/GCA_900193745.1_13682_1_3	-	3063STDY5801664
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.08868	39.6	-	FYYV01	42	2295	2055	6/25/17	7/5/17	Scaffold	SC	SAMEA2626744	GCA_900193755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/755/GCA_900193755.1_13682_2_4	-	3063STDY5801665
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.72702	32.7	-	FKWB01	11	2843	2687	5/18/16	3/6/17	Scaffold	SC	SAMEA2384872	GCA_900082945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/945/GCA_900082945.1_12673_5_80	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.76872	32.7	-	FKWC01	16	2841	2713	5/18/16	3/6/17	Scaffold	SC	SAMEA2384871	GCA_900082955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/955/GCA_900082955.1_12673_5_79	-	MRSA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.00479	39.8	-	FYYY01	21	2243	1999	6/25/17	7/5/17	Scaffold	SC	SAMEA2626745	GCA_900193765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/765/GCA_900193765.1_13682_1_5	-	3063STDY5801666
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.04338	39.6	-	FYYW01	42	2226	1993	6/25/17	7/5/17	Scaffold	SC	SAMEA2626742	GCA_900193775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/775/GCA_900193775.1_13682_2_2	-	3063STDY5801663
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.87427	32.8	-	FKWF01	47	3031	2842	5/18/16	3/6/17	Scaffold	SC	SAMEA2384876	GCA_900082965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/965/GCA_900082965.1_12673_5_84	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.81059	32.7	-	FKWD01	17	2905	2779	5/18/16	3/6/17	Scaffold	SC	SAMEA2384873	GCA_900082975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/975/GCA_900082975.1_12673_5_81	-	MSSA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.12465	39.5	-	FYYZ01	39	2338	2095	6/25/17	7/5/17	Scaffold	SC	SAMEA2682039	GCA_900193785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/785/GCA_900193785.1_14937_1_8	-	3063STDY5861086
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.09265	39.6	-	FYZA01	39	2302	2065	6/25/17	7/5/17	Scaffold	SC	SAMEA2626746	GCA_900193795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/795/GCA_900193795.1_13682_2_6	-	3063STDY5801667
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.84367	32.8	-	FKWE01	16	2981	2831	5/18/16	3/6/17	Scaffold	SC	SAMEA2384877	GCA_900082985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/985/GCA_900082985.1_12673_5_85	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.85767	32.7	-	FKWH01	40	3001	2818	5/18/16	3/6/17	Scaffold	SC	SAMEA2384878	GCA_900082995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/082/995/GCA_900082995.1_12673_5_86	-	MRSA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.09879	39.6	-	FYZC01	33	2314	2081	6/25/17	7/5/17	Scaffold	SC	SAMEA2626748	GCA_900193805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/805/GCA_900193805.1_13682_2_8	-	3063STDY5801669
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.05279	39.6	-	FYZI01	30	2259	2031	6/25/17	7/5/17	Scaffold	SC	SAMEA2626747	GCA_900193815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/815/GCA_900193815.1_13682_1_7	-	3063STDY5801668
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.84695	32.8	-	FKWG01	35	3003	2814	5/18/16	3/6/17	Scaffold	SC	SAMEA2384881	GCA_900083005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/005/GCA_900083005.1_12673_5_89	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.83044	32.8	-	FKWJ01	15	2946	2825	5/18/16	3/6/17	Scaffold	SC	SAMEA2384885	GCA_900083015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/015/GCA_900083015.1_12673_5_93	-	MSSA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.02987	39.7	-	FYZQ01	30	2244	2033	6/25/17	7/5/17	Scaffold	SC	SAMEA2626751	GCA_900193825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/825/GCA_900193825.1_13682_1_11	-	3063STDY5801672
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.05457	39.6	-	FYZG01	21	2252	2029	6/25/17	7/5/17	Scaffold	SC	SAMEA2626750	GCA_900193835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/835/GCA_900193835.1_13682_1_10	-	3063STDY5801671
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.86677	32.8	-	FKWI01	28	3027	2877	5/18/16	3/6/17	Scaffold	SC	SAMEA2384884	GCA_900083025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/025/GCA_900083025.1_12673_5_92	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.83554	32.8	-	FKWK01	30	2981	2803	5/18/16	3/6/17	Scaffold	SC	SAMEA2384886	GCA_900083035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/035/GCA_900083035.1_12673_5_94	-	MRSA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.12523	39.6	-	FYZE01	30	2329	2115	6/25/17	7/5/17	Scaffold	SC	SAMEA2626753	GCA_900193845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/845/GCA_900193845.1_13682_2_13	-	3063STDY5801674
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.06256	39.6	-	FYZD01	42	2272	2005	6/25/17	7/5/17	Scaffold	SC	SAMEA2626749	GCA_900193855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/855/GCA_900193855.1_13682_1_9	-	3063STDY5801670
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.72133	32.8	-	FKYH01	9	2821	2665	5/18/16	3/6/17	Scaffold	SC	SAMEA2384887	GCA_900083045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/045/GCA_900083045.1_12673_5_95	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.78815	32.7	-	FKWL01	22	2879	2756	5/18/16	3/6/17	Scaffold	SC	SAMEA2384889	GCA_900083055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/055/GCA_900083055.1_12673_8_20	-	MRSA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.11797	39.6	-	FYZH01	35	2300	2084	6/25/17	7/5/17	Scaffold	SC	SAMEA2626815	GCA_900193865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/865/GCA_900193865.1_13682_2_75	-	3063STDY5801736
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.05185	39.6	-	FYZK01	24	2264	2036	6/25/17	7/5/17	Scaffold	SC	SAMEA2626752	GCA_900193875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/875/GCA_900193875.1_13682_2_12	-	3063STDY5801673
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.78456	32.8	-	FKWM01	19	2883	2767	5/18/16	3/6/17	Scaffold	SC	SAMEA2384890	GCA_900083065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/065/GCA_900083065.1_12673_8_21	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.72999	32.7	-	FKWN01	16	2845	2693	5/18/16	3/6/17	Scaffold	SC	SAMEA2383881	GCA_900083075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/075/GCA_900083075.1_12876_5_83	-	MSSA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.12825	39.6	-	FYZF01	58	2368	2106	6/25/17	7/5/17	Scaffold	SC	SAMEA2626754	GCA_900193885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/885/GCA_900193885.1_13682_1_14	-	3063STDY5801675
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.1007	39.6	-	FYZB01	28	2309	2059	6/25/17	7/5/17	Scaffold	SC	SAMEA2626755	GCA_900193895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/895/GCA_900193895.1_13682_1_15	-	3063STDY5801676
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.7835	32.8	-	FKWO01	22	2919	2767	5/18/16	3/6/17	Scaffold	SC	SAMEA2445497	GCA_900083085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/085/GCA_900083085.1_12971_2_11	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.80445	32.8	-	FKWP01	26	2926	2774	5/18/16	3/6/17	Scaffold	SC	SAMEA2445501	GCA_900083095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/095/GCA_900083095.1_12971_2_15	-	MRSA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.11762	39.6	-	FYZJ01	36	2295	2087	6/25/17	7/5/17	Scaffold	SC	SAMEA2626814	GCA_900193905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/905/GCA_900193905.1_13682_1_74	-	3063STDY5801735
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.13339	39.7	-	FYZN01	47	2369	2097	6/25/17	7/5/17	Scaffold	SC	SAMEA2626756	GCA_900193915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/915/GCA_900193915.1_13682_1_16	-	3063STDY5801677
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.74091	32.8	-	FKWQ01	13	2819	2649	5/18/16	3/6/17	Scaffold	SC	SAMEA2445505	GCA_900083105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/105/GCA_900083105.1_12971_2_19	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.77784	32.7	-	FKYJ01	6	2914	2744	5/18/16	3/6/17	Scaffold	SC	SAMEA2445509	GCA_900083115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/115/GCA_900083115.1_12971_2_23	-	MRSA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.10479	39.6	-	FYZT01	29	2306	2068	6/25/17	7/5/17	Scaffold	SC	SAMEA2682041	GCA_900193925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/925/GCA_900193925.1_14937_1_10	-	3063STDY5861094
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.06403	39.6	-	FYZP01	46	2260	1994	6/25/17	7/5/17	Scaffold	SC	SAMEA2626758	GCA_900193935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/935/GCA_900193935.1_13682_1_18	-	3063STDY5801679
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.71374	32.8	-	FKWR01	12	2804	2634	5/18/16	3/6/17	Scaffold	SC	SAMEA2445517	GCA_900083125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/125/GCA_900083125.1_12971_2_31	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.7702	32.7	-	FKWS01	22	2903	2753	5/18/16	3/6/17	Scaffold	SC	SAMEA2445529	GCA_900083135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/135/GCA_900083135.1_12971_2_43	-	MRSA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.10474	39.5	-	FYZM01	40	2336	2088	6/25/17	7/5/17	Scaffold	SC	SAMEA2682043	GCA_900193945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/945/GCA_900193945.1_14937_1_12	-	3063STDY5861102
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	1.99442	39.7	-	FYZV01	35	2186	1978	6/25/17	7/5/17	Scaffold	SC	SAMEA2626757	GCA_900193955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/955/GCA_900193955.1_13682_1_17	-	3063STDY5801678
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.7213	32.8	-	FKWT01	12	2825	2667	5/18/16	3/6/17	Scaffold	SC	SAMEA2445533	GCA_900083145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/145/GCA_900083145.1_12971_2_47	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.86476	32.7	-	FKWW01	21	2997	2862	5/19/16	3/6/17	Scaffold	SC	SAMEA2445541	GCA_900083155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/155/GCA_900083155.1_12971_2_55	-	MSSA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.01379	39.7	-	FYZO01	57	2260	2015	6/25/17	7/5/17	Scaffold	SC	SAMEA2682045	GCA_900193965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/965/GCA_900193965.1_14937_1_14	-	3063STDY5861110
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.03074	39.7	-	FYZL01	25	2239	2026	6/25/17	7/5/17	Scaffold	SC	SAMEA2682047	GCA_900193975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/975/GCA_900193975.1_14937_1_16	-	3063STDY5861118
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.87119	32.8	-	FKWY01	37	3017	2874	7/29/16	3/6/17	Scaffold	SC	SAMEA2445549	GCA_900083165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/165/GCA_900083165.1_12971_2_63	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.715	32.7	-	FKWU01	17	2818	2669	5/18/16	3/6/17	Scaffold	SC	SAMEA2445493	GCA_900083175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/175/GCA_900083175.1_12971_2_7	-	MSSA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.08762	39.5	-	FYZW01	39	2297	2054	6/25/17	7/5/17	Scaffold	SC	SAMEA2682051	GCA_900193985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/985/GCA_900193985.1_14937_1_20	-	3063STDY5861134
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.06195	39.6	-	FYZR01	21	2269	2050	6/25/17	7/5/17	Scaffold	SC	SAMEA2626762	GCA_900193995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/995/GCA_900193995.1_13682_1_22	-	3063STDY5801683
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.83773	32.8	-	FKWV01	38	2995	2802	7/29/16	3/6/17	Scaffold	SC	SAMEA2445557	GCA_900083185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/185/GCA_900083185.1_12971_2_71	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.77574	32.7	-	FKWX01	35	2909	2719	5/18/16	3/6/17	Scaffold	SC	SAMEA2445564	GCA_900083195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/195/GCA_900083195.1_12971_2_78	-	MSSA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.06157	39.5	-	FYZS01	20	2261	2042	6/25/17	7/5/17	Scaffold	SC	SAMEA2626759	GCA_900194005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/005/GCA_900194005.1_13682_2_19	-	3063STDY5801680
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.00633	39.7	-	FYZY01	34	2196	1989	6/25/17	7/5/17	Scaffold	SC	SAMEA2626761	GCA_900194015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/015/GCA_900194015.1_13682_1_21	-	3063STDY5801682
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.80219	32.8	-	FKWZ01	23	2924	2811	7/29/16	3/6/17	Scaffold	SC	SAMEA2445572	GCA_900083205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/205/GCA_900083205.1_12971_2_86	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.82565	32.8	-	FKXA01	39	2970	2825	5/18/16	3/6/17	Scaffold	SC	SAMEA2445580	GCA_900083215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/215/GCA_900083215.1_12971_2_94	-	MSSA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	1.98839	39.8	-	FZBT01	39	2187	1922	6/25/17	7/5/17	Scaffold	SC	SAMEA2626760	GCA_900194025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/025/GCA_900194025.1_13682_2_20	-	3063STDY5801681
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.05379	39.6	-	FYZU01	25	2253	2035	6/25/17	7/5/17	Scaffold	SC	SAMEA2626816	GCA_900194035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/035/GCA_900194035.1_13682_1_76	-	3063STDY5801737
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.71698	32.8	-	FKXB01	19	2832	2668	5/18/16	3/6/17	Scaffold	SC	SAMEA2445591	GCA_900083225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/225/GCA_900083225.1_12971_3_10	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.75167	32.7	-	FKXC01	37	2865	2677	5/18/16	3/6/17	Scaffold	SC	SAMEA2445592	GCA_900083235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/235/GCA_900083235.1_12971_3_11	-	MSSA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.03077	39.8	-	FZAB01	33	2250	2025	6/25/17	7/5/17	Scaffold	SC	SAMEA2626764	GCA_900194045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/045/GCA_900194045.1_13682_1_24	-	3063STDY5801685
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.02889	39.7	-	FZAA01	36	2245	2005	6/25/17	7/5/17	Scaffold	SC	SAMEA2626763	GCA_900194055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/055/GCA_900194055.1_13682_2_23	-	3063STDY5801684
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.80106	32.8	-	FKXD01	32	2934	2747	7/29/16	3/6/17	Scaffold	SC	SAMEA2445598	GCA_900083245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/245/GCA_900083245.1_12971_3_17	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.70896	32.7	-	FKXE01	16	2819	2653	7/29/16	3/6/17	Scaffold	SC	SAMEA2445600	GCA_900083255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/255/GCA_900083255.1_12971_3_19	-	MSSA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.15852	39.5	-	FYZX01	40	2374	2145	6/25/17	7/5/17	Scaffold	SC	SAMEA2626765	GCA_900194065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/065/GCA_900194065.1_13682_1_25	-	3063STDY5801686
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.00976	39.8	-	FZAF01	24	2200	1969	6/25/17	7/5/17	Scaffold	SC	SAMEA2626766	GCA_900194075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/075/GCA_900194075.1_13682_2_26	-	3063STDY5801687
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.79567	32.8	-	FKXG01	12	2896	2773	5/18/16	3/6/17	Scaffold	SC	SAMEA2445583	GCA_900083265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/265/GCA_900083265.1_12971_3_2	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.8784	32.8	-	FKXI01	52	3014	2872	5/18/16	3/6/17	Scaffold	SC	SAMEA2445606	GCA_900083275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/275/GCA_900083275.1_12971_3_25	-	MSSA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.08953	39.6	-	FYZZ01	43	2285	2051	6/25/17	7/5/17	Scaffold	SC	SAMEA2626767	GCA_900194085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/085/GCA_900194085.1_13682_1_27	-	3063STDY5801688
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.05768	39.6	-	FZAI01	32	2240	2018	6/25/17	7/5/17	Scaffold	SC	SAMEA2626768	GCA_900194095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/095/GCA_900194095.1_13682_1_28	-	3063STDY5801689
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.84383	32.8	-	FKXF01	41	3022	2827	7/29/16	3/6/17	Scaffold	SC	SAMEA2445607	GCA_900083285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/285/GCA_900083285.1_12971_3_26	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.65823	32.8	-	FKXH01	27	2740	2550	7/29/16	3/6/17	Scaffold	SC	SAMEA2445608	GCA_900083295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/295/GCA_900083295.1_12971_3_27	-	MSSA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.12173	39.6	-	FZAE01	36	2318	2091	6/25/17	7/5/17	Scaffold	SC	SAMEA2626769	GCA_900194105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/105/GCA_900194105.1_13682_2_29	-	3063STDY5801690
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.12472	39.5	-	FZAG01	39	2343	2098	6/25/17	7/5/17	Scaffold	SC	SAMEA2626770	GCA_900194115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/115/GCA_900194115.1_13682_1_30	-	3063STDY5801691
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.77627	32.8	-	FKXJ01	13	2925	2756	7/29/16	3/6/17	Scaffold	SC	SAMEA2445584	GCA_900083305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/305/GCA_900083305.1_12971_3_3	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.8451	32.8	-	FKXM01	48	3009	2817	7/29/16	3/6/17	Scaffold	SC	SAMEA2445614	GCA_900083315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/315/GCA_900083315.1_12971_3_33	-	MSSA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.03148	39.7	-	FZAD01	29	2238	2033	6/25/17	7/5/17	Scaffold	SC	SAMEA2626771	GCA_900194125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/125/GCA_900194125.1_13682_1_31	-	3063STDY5801692
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.09271	39.6	-	FZAC01	40	2302	2061	6/25/17	7/5/17	Scaffold	SC	SAMEA2626772	GCA_900194135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/135/GCA_900194135.1_13682_2_32	-	3063STDY5801693
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.87057	32.8	-	FKXN01	32	3009	2878	7/29/16	3/6/17	Scaffold	SC	SAMEA2445616	GCA_900083325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/325/GCA_900083325.1_12971_3_35	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.7371	32.8	-	FKXK01	12	2883	2731	7/29/16	3/6/17	Scaffold	SC	SAMEA2445615	GCA_900083335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/335/GCA_900083335.1_12971_3_34	-	MSSA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.01425	39.8	-	FZAM01	23	2257	2018	6/25/17	7/5/17	Scaffold	SC	SAMEA2626773	GCA_900194145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/145/GCA_900194145.1_13682_1_33	-	3063STDY5801694
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.05137	39.6	-	FZAJ01	22	2255	2043	6/25/17	7/5/17	Scaffold	SC	SAMEA2626774	GCA_900194155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/155/GCA_900194155.1_13682_2_34	-	3063STDY5801695
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.84701	32.8	-	FKXL01	18	2975	2843	7/29/16	3/6/17	Scaffold	SC	SAMEA2445622	GCA_900083345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/345/GCA_900083345.1_12971_3_41	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.88415	32.8	-	FKXO01	63	3046	2896	5/18/16	3/6/17	Scaffold	SC	SAMEA2445623	GCA_900083355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/355/GCA_900083355.1_12971_3_42	-	MSSA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.10685	39.6	-	FZAH01	36	2292	2055	6/25/17	7/5/17	Scaffold	SC	SAMEA2626775	GCA_900194165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/165/GCA_900194165.1_13682_2_35	-	3063STDY5801696
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.06745	39.5	-	FZAK01	39	2255	2028	6/25/17	7/5/17	Scaffold	SC	SAMEA2626776	GCA_900194175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/175/GCA_900194175.1_13682_2_36	-	3063STDY5801697
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.83978	32.7	-	FKXS01	40	2962	2787	7/29/16	3/6/17	Scaffold	SC	SAMEA2445639	GCA_900083365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/365/GCA_900083365.1_12971_3_58	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.73722	32.7	-	FKXQ01	25	2845	2668	7/29/16	3/6/17	Scaffold	SC	SAMEA2445630	GCA_900083375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/375/GCA_900083375.1_12971_3_49	-	MRSA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.01454	39.8	-	FZAL01	24	2253	2015	6/25/17	7/5/17	Scaffold	SC	SAMEA2626777	GCA_900194185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/185/GCA_900194185.1_13682_2_37	-	3063STDY5801698
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.09732	39.6	-	FZAN01	28	2322	2095	6/25/17	7/5/17	Scaffold	SC	SAMEA2626779	GCA_900194195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/195/GCA_900194195.1_13682_2_39	-	3063STDY5801700
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.7645	32.7	-	FKXR01	37	2874	2689	7/29/16	3/6/17	Scaffold	SC	SAMEA2445631	GCA_900083385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/385/GCA_900083385.1_12971_3_50	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.8013	32.8	-	FKXP01	14	2939	2801	7/29/16	3/6/17	Scaffold	SC	SAMEA2445624	GCA_900083395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/395/GCA_900083395.1_12971_3_43	-	MSSA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.10648	39.6	-	FZAP01	43	2313	2065	6/25/17	7/5/17	Scaffold	SC	SAMEA2626778	GCA_900194205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/205/GCA_900194205.1_13682_1_38	-	3063STDY5801699
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.14453	39.6	-	FZAQ01	40	2360	2133	6/25/17	7/5/17	Scaffold	SC	SAMEA2626780	GCA_900194215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/215/GCA_900194215.1_13682_1_40	-	3063STDY5801701
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.65287	32.7	-	FKXT01	14	2737	2593	7/29/16	3/6/17	Scaffold	SC	SAMEA2445640	GCA_900083405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/405/GCA_900083405.1_12971_3_59	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.78772	32.7	-	FKXU01	12	2929	2765	7/29/16	3/6/17	Scaffold	SC	SAMEA2445646	GCA_900083415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/415/GCA_900083415.1_12971_3_65	-	MSSA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.08733	39.5	-	FZAO01	34	2290	2057	6/25/17	7/5/17	Scaffold	SC	SAMEA2626782	GCA_900194225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/225/GCA_900194225.1_13682_1_42	-	3063STDY5801703
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.05161	39.6	-	FZAT01	25	2259	2029	6/25/17	7/5/17	Scaffold	SC	SAMEA2626783	GCA_900194235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/235/GCA_900194235.1_13682_1_43	-	3063STDY5801704
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.81337	32.7	-	FKXV01	46	2953	2756	7/29/16	3/6/17	Scaffold	SC	SAMEA2445647	GCA_900083425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/425/GCA_900083425.1_12971_3_66	-	MRSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.7478	32.9	-	FKXX01	20	2863	2706	7/29/16	3/6/17	Scaffold	SC	SAMEA2445648	GCA_900083435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/435/GCA_900083435.1_12971_3_67	-	MSSA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.07025	39.6	-	FZAS01	27	2290	2068	6/25/17	7/5/17	Scaffold	SC	SAMEA2626784	GCA_900194245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/245/GCA_900194245.1_13682_1_44	-	3063STDY5801705
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.04652	39.6	-	FZAR01	21	2233	2019	6/25/17	7/5/17	Scaffold	SC	SAMEA2626785	GCA_900194255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/255/GCA_900194255.1_13682_2_45	-	3063STDY5801706
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.86585	32.7	-	FKXW01	33	2983	2806	7/29/16	3/6/17	Scaffold	SC	SAMEA2445654	GCA_900083445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/445/GCA_900083445.1_12971_3_73	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.73851	32.8	-	FKXY01	13	2847	2688	7/29/16	3/6/17	Scaffold	SC	SAMEA2445656	GCA_900083455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/455/GCA_900083455.1_12971_3_75	-	MSSA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.05844	39.6	-	FZAU01	28	2246	2010	6/25/17	7/5/17	Scaffold	SC	SAMEA2626786	GCA_900194265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/265/GCA_900194265.1_13682_2_46	-	3063STDY5801707
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.09568	39.7	-	FZAV01	20	2326	2090	6/25/17	7/5/17	Scaffold	SC	SAMEA2626787	GCA_900194275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/275/GCA_900194275.1_13682_2_47	-	3063STDY5801708
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.74415	32.7	-	FKXZ01	22	2825	2698	7/29/16	3/6/17	Scaffold	SC	SAMEA2445663	GCA_900083465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/465/GCA_900083465.1_12971_3_82	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.7422	32.7	-	FKYB01	14	2880	2712	7/29/16	3/6/17	Scaffold	SC	SAMEA2445670	GCA_900083475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/475/GCA_900083475.1_12971_3_89	-	MRSA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.12918	39.6	-	FZAW01	34	2367	2119	6/25/17	7/5/17	Scaffold	SC	SAMEA2626788	GCA_900194285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/285/GCA_900194285.1_13682_1_48	-	3063STDY5801709
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.09293	39.6	-	FZAZ01	22	2302	2080	6/25/17	7/5/17	Scaffold	SC	SAMEA2626790	GCA_900194295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/295/GCA_900194295.1_13682_1_50	-	3063STDY5801711
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.74176	32.8	-	FKYC01	14	2834	2678	7/29/16	3/6/17	Scaffold	SC	SAMEA2445590	GCA_900083485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/485/GCA_900083485.1_12971_3_9	-	MSSA
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.71503	32.8	-	FKYA01	23	2839	2678	7/29/16	3/6/17	Scaffold	SC	SAMEA2445671	GCA_900083495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/495/GCA_900083495.1_12971_3_90	-	MRSA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.12363	39.6	-	FZAX01	31	2343	2100	6/25/17	7/5/17	Scaffold	SC	SAMEA2626791	GCA_900194305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/305/GCA_900194305.1_13682_1_51	-	3063STDY5801712
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.12638	39.6	-	FZAY01	75	2332	2030	6/25/17	7/5/17	Scaffold	SC	SAMEA2626792	GCA_900194315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/315/GCA_900194315.1_13682_2_52	-	3063STDY5801713
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.79027	32.8	-	FKYD01	28	2909	2783	7/29/16	3/6/17	Scaffold	SC	SAMEA2445672	GCA_900083505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/083/505/GCA_900083505.1_12971_3_91	-	MRSA
Staphylococcus aureus	1280	PRJEB14187	357885	Terrabacteria group	Firmicutes	2.81677	32.9	-	FLLV01	29	2955	2772	12/17/16	3/6/17	Scaffold	Functional Genomics Genter Zurich	SAMEA4017533	GCA_900088515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/088/515/GCA_900088515.1_Fin48_H18	-	-
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.14823	39.6	-	FZBE01	45	2371	2139	6/25/17	7/5/17	Scaffold	SC	SAMEA2626794	GCA_900194325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/325/GCA_900194325.1_13682_1_54	-	3063STDY5801715
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.05827	39.6	-	FZBA01	34	2231	2014	6/25/17	7/5/17	Scaffold	SC	SAMEA2626793	GCA_900194335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/335/GCA_900194335.1_13682_2_53	-	3063STDY5801714
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.94689	32.7	-	FMNO01	55	3139	2989	9/30/16	3/6/17	Scaffold	SC	SAMEA2298704	GCA_900097275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/275/GCA_900097275.1_12291_8_5	-	type strain: MRSA579
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.71712	32.7	-	FMMQ01	20	2828	2676	9/30/16	3/6/17	Scaffold	SC	SAMEA2298716	GCA_900097285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/285/GCA_900097285.1_12291_8_17	-	type strain: MRSA035668
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.12045	39.6	-	FZBF01	43	2342	2113	6/25/17	7/5/17	Scaffold	SC	SAMEA2626795	GCA_900194345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/345/GCA_900194345.1_13682_1_55	-	3063STDY5801716
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.05254	39.6	-	FZBB01	25	2269	2039	6/25/17	7/5/17	Scaffold	SC	SAMEA2626796	GCA_900194355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/355/GCA_900194355.1_13682_1_56	-	3063STDY5801717
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.80034	32.7	-	FMNP01	16	2938	2783	9/30/16	3/6/17	Scaffold	SC	SAMEA2298731	GCA_900097295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/295/GCA_900097295.1_12291_8_32	-	MRSA457
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.85403	32.7	-	FMMT01	25	3030	2909	9/30/16	3/6/17	Scaffold	SC	SAMEA2298720	GCA_900097305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/305/GCA_900097305.1_12291_8_21	-	MRSA073B
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.12212	39.6	-	FZBC01	44	2326	2102	6/25/17	7/5/17	Scaffold	SC	SAMEA2626797	GCA_900194365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/365/GCA_900194365.1_13682_2_57	-	3063STDY5801718
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.11637	39.5	-	FZBD01	37	2328	2095	6/25/17	7/5/17	Scaffold	SC	SAMEA2626798	GCA_900194375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/375/GCA_900194375.1_13682_1_58	-	3063STDY5801719
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.79599	32.8	-	FMNF01	35	2945	2773	9/30/16	3/6/17	Scaffold	SC	SAMEA3109337	GCA_900097315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/315/GCA_900097315.1_15056_7_71	-	37H
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.72896	32.7	-	FMMS01	12	2855	2691	9/30/16	3/6/17	Scaffold	SC	SAMEA3109321	GCA_900097325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/325/GCA_900097325.1_15056_7_55	-	040H
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.04921	39.6	-	FZBG01	32	2246	2016	6/25/17	7/5/17	Scaffold	SC	SAMEA2626799	GCA_900194385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/385/GCA_900194385.1_13682_1_59	-	3063STDY5801720
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	1.9974	39.7	-	FZBI01	35	2195	1979	6/25/17	7/5/17	Scaffold	SC	SAMEA2682052	GCA_900194395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/395/GCA_900194395.1_14937_1_21	-	3063STDY5861142
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.75413	32.7	-	FMNQ01	34	2888	2718	9/30/16	3/6/17	Scaffold	SC	SAMEA3109328	GCA_900097335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/335/GCA_900097335.1_15056_7_62	-	064Hii
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.75137	32.7	-	FMNV01	20	2913	2755	9/30/16	3/6/17	Scaffold	SC	SAMEA3109317	GCA_900097345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/345/GCA_900097345.1_15056_7_51	-	010H
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.06462	39.6	-	FZBH01	45	2262	1996	6/25/17	7/5/17	Scaffold	SC	SAMEA2626801	GCA_900194405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/405/GCA_900194405.1_13682_1_61	-	3063STDY5801722
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.13901	39.6	-	FZBN01	51	2366	2099	6/25/17	7/5/17	Scaffold	SC	SAMEA2626804	GCA_900194415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/415/GCA_900194415.1_13682_2_64	-	3063STDY5801725
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.79512	32.7	-	FMNJ01	14	2935	2778	9/30/16	3/6/17	Scaffold	SC	SAMEA2298747	GCA_900097355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/355/GCA_900097355.1_12291_8_48	-	type strain: MRSA218
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.75047	32.7	-	FMMR01	17	2869	2711	9/30/16	3/6/17	Scaffold	SC	SAMEA2298715	GCA_900097365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/365/GCA_900097365.1_12291_8_16	-	T.MRSA180
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.0067	39.7	-	FZBO01	36	2189	1989	6/25/17	7/5/17	Scaffold	SC	SAMEA2626803	GCA_900194425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/425/GCA_900194425.1_13682_1_63	-	3063STDY5801724
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.10215	39.6	-	FZBJ01	20	2322	2094	6/25/17	7/5/17	Scaffold	SC	SAMEA2626802	GCA_900194435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/435/GCA_900194435.1_13682_2_62	-	3063STDY5801723
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.8008	32.7	-	FMOG01	19	2942	2784	9/30/16	3/6/17	Scaffold	SC	SAMEA2298709	GCA_900097375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/375/GCA_900097375.1_12291_8_10	-	type strain: MRSA045
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.75194	32.7	-	FMMW01	18	2898	2746	9/30/16	3/6/17	Scaffold	SC	SAMEA3109318	GCA_900097385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/385/GCA_900097385.1_15056_7_52	-	011Hi
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.03228	39.7	-	FZBM01	27	2236	2025	6/25/17	7/5/17	Scaffold	SC	SAMEA2626806	GCA_900194445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/445/GCA_900194445.1_13682_2_66	-	3063STDY5801727
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.12394	39.5	-	FZBY01	40	2340	2098	6/25/17	7/5/17	Scaffold	SC	SAMEA2626805	GCA_900194455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/455/GCA_900194455.1_13682_2_65	-	3063STDY5801726
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.94772	32.7	-	FMNM01	53	3177	2999	9/30/16	3/6/17	Scaffold	SC	SAMEA2298760	GCA_900097395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/395/GCA_900097395.1_12291_8_61	-	MRSA 197 T(A)
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.73294	32.8	-	FMNE01	19	2828	2709	9/30/16	3/6/17	Scaffold	SC	SAMEA3109330	GCA_900097405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/405/GCA_900097405.1_15056_7_64	-	078H
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.06313	39.6	-	FZBS01	39	2265	2008	6/25/17	7/5/17	Scaffold	SC	SAMEA2682053	GCA_900194465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/465/GCA_900194465.1_14937_1_22	-	3063STDY5861150
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.01097	39.8	-	FZBK01	28	2213	1968	6/25/17	7/5/17	Scaffold	SC	SAMEA2626807	GCA_900194475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/475/GCA_900194475.1_13682_2_67	-	3063STDY5801728
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.94914	32.7	-	FMNI01	59	3147	3004	9/30/16	3/6/17	Scaffold	SC	SAMEA2298714	GCA_900097415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/415/GCA_900097415.1_12291_8_15	-	MRSA40B
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.74551	32.7	-	FMNB01	21	2886	2722	9/30/16	3/6/17	Scaffold	SC	SAMEA3109334	GCA_900097425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/425/GCA_900097425.1_15056_7_68	-	102AN
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.09677	39.6	-	FZBL01	25	2316	2098	6/25/17	7/5/17	Scaffold	SC	SAMEA2626809	GCA_900194485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/485/GCA_900194485.1_13682_1_69	-	3063STDY5801730
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.12032	39.6	-	FZBP01	32	2357	2120	6/25/17	7/5/17	Scaffold	SC	SAMEA2626808	GCA_900194495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/495/GCA_900194495.1_13682_2_68	-	3063STDY5801729
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.80179	32.7	-	FMNK01	14	2942	2781	9/30/16	3/6/17	Scaffold	SC	SAMEA2298723	GCA_900097435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/435/GCA_900097435.1_12291_8_24	-	type strain: MRSA82
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.71999	32.7	-	FMNC01	16	2843	2691	9/30/16	3/6/17	Scaffold	SC	SAMEA3109332	GCA_900097445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/445/GCA_900097445.1_15056_7_66	-	084H
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.13603	39.6	-	FZBQ01	43	2346	2121	6/25/17	7/5/17	Scaffold	SC	SAMEA2682054	GCA_900194505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/505/GCA_900194505.1_14937_1_23	-	3063STDY5861158
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.09878	39.6	-	FZBR01	48	2315	2048	6/25/17	7/5/17	Scaffold	SC	SAMEA2626810	GCA_900194515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/515/GCA_900194515.1_13682_1_70	-	3063STDY5801731
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.73796	32.7	-	FMNX01	16	2883	2712	9/30/16	3/6/17	Scaffold	SC	SAMEA3109326	GCA_900097455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/455/GCA_900097455.1_15056_7_60	-	063AN
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.72127	32.7	-	FMNR01	22	2795	2619	9/30/16	3/6/17	Scaffold	SC	SAMEA3109324	GCA_900097465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/465/GCA_900097465.1_15056_7_58	-	04Hi
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.08421	39.6	-	FZBU01	28	2269	2043	6/25/17	7/5/17	Scaffold	SC	SAMEA2626818	GCA_900194525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/525/GCA_900194525.1_13682_1_78	-	3063STDY5801759
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.09532	39.6	-	FZBV01	35	2309	2079	6/25/17	7/5/17	Scaffold	SC	SAMEA2682056	GCA_900194535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/535/GCA_900194535.1_14937_1_25	-	3063STDY5861174
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.82931	32.7	-	FMMX01	16	2994	2832	9/30/16	3/6/17	Scaffold	SC	SAMEA2298713	GCA_900097475.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/475/GCA_900097475.1_12291_8_14	-	type strain: MRSA040
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.76854	32.7	-	FMMY01	29	2848	2683	9/30/16	3/6/17	Scaffold	SC	SAMEA3109331	GCA_900097485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/485/GCA_900097485.1_15056_7_65	-	080H
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.16942	39.6	-	FZBX01	48	2416	2173	6/25/17	7/5/17	Scaffold	SC	SAMEA2682040	GCA_900194545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/545/GCA_900194545.1_14937_1_9	-	3063STDY5861087
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.10323	39.6	-	FZBW01	42	2335	2068	6/25/17	7/5/17	Scaffold	SC	SAMEA2626817	GCA_900194555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/555/GCA_900194555.1_13682_1_77	-	3063STDY5801758
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.75496	32.7	-	FMMV01	33	2886	2717	9/30/16	3/6/17	Scaffold	SC	SAMEA3109320	GCA_900097495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/495/GCA_900097495.1_15056_7_54	-	015H
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.82232	32.8	-	FMOI01	39	2960	2770	9/30/16	3/6/17	Scaffold	SC	SAMEA3109322	GCA_900097505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/505/GCA_900097505.1_15056_7_56	-	043H
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	1.99605	39.7	-	FZCD01	31	2188	1984	6/25/17	7/5/17	Scaffold	SC	SAMEA2626812	GCA_900194565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/565/GCA_900194565.1_13682_2_72	-	3063STDY5801733
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.07213	39.6	-	FZCB01	34	2283	2050	6/25/17	7/5/17	Scaffold	SC	SAMEA2626819	GCA_900194575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/575/GCA_900194575.1_13682_1_79	-	3063STDY5801760
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.75097	32.7	-	FMNA01	25	2916	2760	9/30/16	3/6/17	Scaffold	SC	SAMEA3109323	GCA_900097515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/515/GCA_900097515.1_15056_7_57	-	049H
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.75762	32.7	-	FMNY01	19	2883	2718	9/30/16	3/6/17	Scaffold	SC	SAMEA2298718	GCA_900097525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/525/GCA_900097525.1_12291_8_19	-	type strain: MRSA118
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.10449	39.5	-	FZCA01	34	2309	2076	6/25/17	7/5/17	Scaffold	SC	SAMEA2626813	GCA_900194585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/585/GCA_900194585.1_13682_2_73	-	3063STDY5801734
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.12364	39.6	-	FZCC01	46	2324	2094	6/25/17	7/5/17	Scaffold	SC	SAMEA2626821	GCA_900194595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/595/GCA_900194595.1_13682_1_81	-	3063STDY5801762
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.89628	32.7	-	FMMZ01	48	3065	2925	9/30/16	3/6/17	Scaffold	SC	SAMEA2298741	GCA_900097535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/535/GCA_900097535.1_12291_8_42	-	type strain: MRSA176
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.81403	32.8	-	FMNG01	22	2974	2809	9/30/16	3/6/17	Scaffold	SC	SAMEA2298729	GCA_900097545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/545/GCA_900097545.1_12291_8_30	-	MRSA36
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.06131	39.6	-	FZBZ01	24	2264	2042	6/25/17	7/5/17	Scaffold	SC	SAMEA2626822	GCA_900194605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/605/GCA_900194605.1_13682_2_82	-	3063STDY5801763
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.02868	39.6	-	FZCE01	25	2222	1998	6/25/17	7/5/17	Scaffold	SC	SAMEA2626823	GCA_900194615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/615/GCA_900194615.1_13682_2_83	-	3063STDY5801764
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.7993	32.7	-	FMNL01	25	2916	2786	9/30/16	3/6/17	Scaffold	SC	SAMEA3109329	GCA_900097555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/555/GCA_900097555.1_15056_7_63	-	065H
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.72241	32.7	-	FMMU01	23	2798	2621	9/30/16	3/6/17	Scaffold	SC	SAMEA3109319	GCA_900097565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/565/GCA_900097565.1_15056_7_53	-	011Hii
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.07136	39.6	-	FZCJ01	36	2282	2045	6/25/17	7/5/17	Scaffold	SC	SAMEA2626820	GCA_900194625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/625/GCA_900194625.1_13682_2_80	-	3063STDY5801761
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.1083	39.5	-	FZCO01	35	2326	2075	6/25/17	7/5/17	Scaffold	SC	SAMEA2626824	GCA_900194635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/635/GCA_900194635.1_13682_2_84	-	3063STDY5801765
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.74903	32.7	-	FMND01	15	2855	2706	9/30/16	3/6/17	Scaffold	SC	SAMEA2298734	GCA_900097575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/575/GCA_900097575.1_12291_8_35	-	type strain: MRSA300
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.74633	32.7	-	FMNN01	26	2893	2723	9/30/16	3/6/17	Scaffold	SC	SAMEA3109335	GCA_900097585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/585/GCA_900097585.1_15056_7_69	-	112AN
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.10561	39.6	-	FZCF01	31	2288	2082	6/25/17	7/5/17	Scaffold	SC	SAMEA2626825	GCA_900194645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/645/GCA_900194645.1_13682_1_85	-	3063STDY5801766
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.11139	39.7	-	FZCH01	32	2325	2079	6/25/17	7/5/17	Scaffold	SC	SAMEA2626827	GCA_900194655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/655/GCA_900194655.1_13682_1_87	-	3063STDY5801768
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.75395	32.7	-	FMNW01	37	2884	2715	9/30/16	3/6/17	Scaffold	SC	SAMEA3109327	GCA_900097595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/595/GCA_900097595.1_15056_7_61	-	064Hi
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.86246	32.7	-	FMOA01	21	3032	2909	9/30/16	3/6/17	Scaffold	SC	SAMEA2298706	GCA_900097605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/605/GCA_900097605.1_12291_8_7	-	MRSA609
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.13711	39.4	-	FZCG01	38	2326	2096	6/25/17	7/5/17	Scaffold	SC	SAMEA2626828	GCA_900194665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/665/GCA_900194665.1_13682_1_88	-	3063STDY5801769
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.09264	39.5	-	FZCL01	32	2275	2041	6/25/17	7/5/17	Scaffold	SC	SAMEA2626831	GCA_900194675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/675/GCA_900194675.1_13682_1_91	-	3063STDY5801772
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.75391	32.7	-	FMOE01	32	2880	2717	9/30/16	3/6/17	Scaffold	SC	SAMEA3109325	GCA_900097615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/615/GCA_900097615.1_15056_7_59	-	04Hii
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.94883	32.7	-	FMOB01	52	3144	3003	9/30/16	3/6/17	Scaffold	SC	SAMEA2298750	GCA_900097625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/625/GCA_900097625.1_12291_8_51	-	type strain: MRSA659
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.10521	39.6	-	FZCK01	43	2332	2068	6/25/17	7/5/17	Scaffold	SC	SAMEA2626829	GCA_900194685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/685/GCA_900194685.1_13682_2_89	-	3063STDY5801770
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.14299	39.7	-	FZCI01	48	2329	2011	6/25/17	7/5/17	Scaffold	SC	SAMEA2626830	GCA_900194695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/695/GCA_900194695.1_13682_2_90	-	3063STDY5801771
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.74865	32.7	-	FMOC01	14	2868	2715	9/30/16	3/6/17	Scaffold	SC	SAMEA2298742	GCA_900097635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/635/GCA_900097635.1_12291_8_43	-	MRSA079B
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.7915	32.7	-	FMNS01	14	2931	2774	9/30/16	3/6/17	Scaffold	SC	SAMEA2298705	GCA_900097645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/645/GCA_900097645.1_12291_8_6	-	type strain: MRSA352
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.08819	39.6	-	FZCM01	42	2295	2051	6/25/17	7/5/17	Scaffold	SC	SAMEA2626826	GCA_900194705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/705/GCA_900194705.1_13682_1_86	-	3063STDY5801767
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.04998	39.6	-	FZCP01	26	2250	2036	6/25/17	7/5/17	Scaffold	SC	SAMEA2626832	GCA_900194715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/715/GCA_900194715.1_13682_2_92	-	3063STDY5801773
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.79681	32.7	-	FMNT01	20	2957	2801	9/30/16	3/6/17	Scaffold	SC	SAMEA2298703	GCA_900097655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/655/GCA_900097655.1_12291_8_4	-	type strain: MRSA280
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.72105	32.7	-	FMNH01	16	2843	2684	9/30/16	3/6/17	Scaffold	SC	SAMEA3109333	GCA_900097665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/665/GCA_900097665.1_15056_7_67	-	087H
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.15128	39.5	-	FZCN01	63	2364	2093	6/25/17	7/5/17	Scaffold	SC	SAMEA2626833	GCA_900194725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/725/GCA_900194725.1_13682_1_93	-	3063STDY5801774
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.05544	39.6	-	FZCT01	44	2262	2037	6/25/17	7/5/17	Scaffold	SC	SAMEA2682042	GCA_900194735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/735/GCA_900194735.1_14937_1_11	-	3063STDY5861095
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.76622	32.8	-	FMNU01	16	2878	2750	9/30/16	3/6/17	Scaffold	SC	SAMEA2298743	GCA_900097675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/675/GCA_900097675.1_12291_8_44	-	type strain: MRSA041776/938686
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.83631	32.7	-	FMNZ01	16	3006	2845	9/30/16	3/6/17	Scaffold	SC	SAMEA2298755	GCA_900097685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/685/GCA_900097685.1_12291_8_56	-	type strain: MRSA 138
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.09932	39.6	-	FZCU01	26	2308	2092	6/25/17	7/5/17	Scaffold	SC	SAMEA2626834	GCA_900194745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/745/GCA_900194745.1_13682_1_94	-	3063STDY5801775
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.11431	39.6	-	FZCQ01	28	2320	2094	6/25/17	7/5/17	Scaffold	SC	SAMEA2626835	GCA_900194755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/755/GCA_900194755.1_13682_2_95	-	3063STDY5801776
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.79568	32.7	-	FMOD01	25	2958	2799	9/30/16	3/6/17	Scaffold	SC	SAMEA2298746	GCA_900097695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/695/GCA_900097695.1_12291_8_47	-	MRSA166(F21)
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.79282	32.7	-	FMOM01	16	2937	2779	9/30/16	3/6/17	Scaffold	SC	SAMEA2298724	GCA_900097705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/705/GCA_900097705.1_12291_8_25	-	MRSA077
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	1.99635	39.7	-	FZCR01	30	2188	1988	6/25/17	7/5/17	Scaffold	SC	SAMEA2626836	GCA_900194765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/765/GCA_900194765.1_13681_2_1	-	3063STDY5801777
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.05087	39.6	-	FZCS01	27	2264	2033	6/25/17	7/5/17	Scaffold	SC	SAMEA2626837	GCA_900194775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/775/GCA_900194775.1_13681_2_2	-	3063STDY5801778
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.71246	32.7	-	FMOJ01	17	2788	2666	9/30/16	3/6/17	Scaffold	SC	SAMEA2298744	GCA_900097715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/715/GCA_900097715.1_12291_8_45	-	MRSA012T(+)
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.74884	32.7	-	FMOK01	13	2884	2732	9/30/16	3/6/17	Scaffold	SC	SAMEA3109336	GCA_900097725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/725/GCA_900097725.1_15056_7_70	-	218AP
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.13947	39.6	-	FZCX01	30	2345	2119	6/25/17	7/5/17	Scaffold	SC	SAMEA2626839	GCA_900194785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/785/GCA_900194785.1_13681_2_4	-	3063STDY5801780
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.10602	39.7	-	FZCV01	35	2326	2080	6/25/17	7/5/17	Scaffold	SC	SAMEA2626838	GCA_900194795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/795/GCA_900194795.1_13681_2_3	-	3063STDY5801779
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.79945	32.8	-	FMOH01	16	2923	2798	9/30/16	3/6/17	Scaffold	SC	SAMEA2298739	GCA_900097735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/735/GCA_900097735.1_12291_8_40	-	type strain: MRSA036667
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.84795	32.7	-	FMOL01	13	3017	2859	9/30/16	3/6/17	Scaffold	SC	SAMEA2298730	GCA_900097745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/745/GCA_900097745.1_12291_8_31	-	type strain: MRSA066
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.11794	39.6	-	FZDA01	35	2311	2089	6/25/17	7/5/17	Scaffold	SC	SAMEA2626840	GCA_900194805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/805/GCA_900194805.1_13681_2_5	-	3063STDY5801781
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.0522	39.6	-	FZCY01	22	2271	2041	6/25/17	7/5/17	Scaffold	SC	SAMEA2626844	GCA_900194815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/815/GCA_900194815.1_13681_1_9	-	3063STDY5801785
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.80112	32.8	-	FMOF01	27	2891	2730	9/30/16	3/6/17	Scaffold	SC	SAMEA2298710	GCA_900097755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/755/GCA_900097755.1_12291_8_11	-	type strain: MRSA047198
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.81094	32.7	-	FMON01	18	2978	2820	9/30/16	3/6/17	Scaffold	SC	SAMEA2298700	GCA_900097765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/765/GCA_900097765.1_12291_8_1	-	type strain: MRSA071
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.08015	39.6	-	FZCW01	39	2268	2037	6/25/17	7/5/17	Scaffold	SC	SAMEA2626841	GCA_900194825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/825/GCA_900194825.1_13681_2_6	-	3063STDY5801782
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.08067	39.6	-	FZCZ01	41	2267	2033	6/25/17	7/5/17	Scaffold	SC	SAMEA2626842	GCA_900194835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/835/GCA_900194835.1_13681_1_7	-	3063STDY5801783
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.79948	32.8	-	FMOS01	16	2922	2798	9/30/16	3/6/17	Scaffold	SC	SAMEA2298736	GCA_900097775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/775/GCA_900097775.1_12291_8_37	-	type strain: MRSA08
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.72247	32.7	-	FMOQ01	18	2877	2692	9/30/16	3/6/17	Scaffold	SC	SAMEA2298732	GCA_900097785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/785/GCA_900097785.1_12291_8_33	-	type strain: MRSA122
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.09995	39.6	-	FZDD01	41	2318	2044	6/25/17	7/5/17	Scaffold	SC	SAMEA2626845	GCA_900194845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/845/GCA_900194845.1_13681_2_10	-	3063STDY5801786
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.06297	39.6	-	FZDE01	21	2268	2036	6/25/17	7/5/17	Scaffold	SC	SAMEA2626847	GCA_900194855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/855/GCA_900194855.1_13681_1_12	-	3063STDY5801788
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.8013	32.7	-	FMOO01	17	2948	2788	9/30/16	3/6/17	Scaffold	SC	SAMEA2298712	GCA_900097795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/795/GCA_900097795.1_12291_8_13	-	type strain: MRSA140
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.89735	32.7	-	FMOP01	49	3056	2919	9/30/16	3/6/17	Scaffold	SC	SAMEA2298722	GCA_900097805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/805/GCA_900097805.1_12291_8_23	-	type strain: MRSA207
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.0388	39.7	-	FZDC01	30	2228	2031	6/25/17	7/5/17	Scaffold	SC	SAMEA2626846	GCA_900194865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/865/GCA_900194865.1_13681_1_11	-	3063STDY5801787
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.03474	39.7	-	FZDB01	31	2230	2028	6/25/17	7/5/17	Scaffold	SC	SAMEA2626849	GCA_900194875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/875/GCA_900194875.1_13681_2_14	-	3063STDY5801790
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.79761	32.7	-	FMOR01	28	2912	2787	9/30/16	3/6/17	Scaffold	SC	SAMEA2298707	GCA_900097815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/815/GCA_900097815.1_12291_8_8	-	MRSA933832
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.85571	32.8	-	FMOU01	52	3014	2815	9/30/16	3/6/17	Scaffold	SC	SAMEA2298708	GCA_900097825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/825/GCA_900097825.1_12291_8_9	-	type strain: MRSA941440/047440
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.11719	39.5	-	FZDK01	35	2334	2091	6/25/17	7/5/17	Scaffold	SC	SAMEA2626851	GCA_900194885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/885/GCA_900194885.1_13681_1_16	-	3063STDY5801792
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.12912	39.5	-	FZDI01	35	2339	2106	6/25/17	7/5/17	Scaffold	SC	SAMEA2626843	GCA_900194895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/895/GCA_900194895.1_13681_2_8	-	3063STDY5801784
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.74742	32.8	-	FMOV01	16	2844	2683	9/30/16	3/6/17	Scaffold	SC	SAMEA2298756	GCA_900097835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/835/GCA_900097835.1_12291_8_57	-	MSSA T188
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.79047	32.7	-	FMOT01	22	2926	2801	9/30/16	3/6/17	Scaffold	SC	SAMEA2298749	GCA_900097845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/845/GCA_900097845.1_12291_8_50	-	type strain: MSSA120
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.08279	39.7	-	FZDG01	42	2293	2034	6/25/17	7/5/17	Scaffold	SC	SAMEA2626852	GCA_900194905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/905/GCA_900194905.1_13681_2_17	-	3063STDY5801793
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.11196	39.6	-	FZDF01	35	2318	2082	6/25/17	7/5/17	Scaffold	SC	SAMEA2682046	GCA_900194915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/915/GCA_900194915.1_14937_1_15	-	3063STDY5861111
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.82347	32.8	-	FMOW01	30	2952	2783	9/30/16	3/6/17	Scaffold	SC	SAMEA2298735	GCA_900097855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/855/GCA_900097855.1_12291_8_36	-	type strain: MSSA777507
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.76957	32.7	-	FMOX01	28	2854	2687	9/30/16	3/6/17	Scaffold	SC	SAMEA2298725	GCA_900097865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/865/GCA_900097865.1_12291_8_26	-	MSSAT145
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.06113	39.5	-	FZDH01	21	2263	2048	6/25/17	7/5/17	Scaffold	SC	SAMEA2682044	GCA_900194925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/925/GCA_900194925.1_14937_1_13	-	3063STDY5861103
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.16478	39.6	-	FZDQ01	40	2398	2153	6/25/17	7/5/17	Scaffold	SC	SAMEA2626854	GCA_900194935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/935/GCA_900194935.1_13681_2_19	-	3063STDY5801795
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.83483	32.7	-	FMOY01	21	2999	2878	9/30/16	3/6/17	Scaffold	SC	SAMEA2298701	GCA_900097875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/875/GCA_900097875.1_12291_8_2	-	MSSAT143
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.81838	32.8	-	FMSF01	9	2972	2825	10/5/16	3/6/17	Scaffold	SC	SAMEA2298711	GCA_900097885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/885/GCA_900097885.1_12291_8_12	-	MSSAT94
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.09632	39.6	-	FZDO01	38	2283	2073	6/25/17	7/5/17	Scaffold	SC	SAMEA2626853	GCA_900194945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/945/GCA_900194945.1_13681_1_18	-	3063STDY5801794
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.05531	39.6	-	FZDJ01	30	2249	2006	6/25/17	7/5/17	Scaffold	SC	SAMEA2626855	GCA_900194955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/955/GCA_900194955.1_13681_2_20	-	3063STDY5801796
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.77018	32.7	-	FMOZ01	16	2906	2756	9/30/16	3/6/17	Scaffold	SC	SAMEA2298758	GCA_900097895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/895/GCA_900097895.1_12291_8_59	-	MRSA 041T (B)
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.83596	32.7	-	FMPB01	11	2993	2839	9/30/16	3/6/17	Scaffold	SC	SAMEA2298740	GCA_900097905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/905/GCA_900097905.1_12291_8_41	-	MRSA012TA
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.08254	39.5	-	FZDP01	31	2260	2026	6/25/17	7/5/17	Scaffold	SC	SAMEA2626856	GCA_900194965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/965/GCA_900194965.1_13681_2_21	-	3063STDY5801797
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.0148	39.7	-	FZDM01	24	2215	1985	6/25/17	7/5/17	Scaffold	SC	SAMEA2626857	GCA_900194975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/975/GCA_900194975.1_13681_1_22	-	3063STDY5801798
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.81545	32.8	-	FMPA01	43	2927	2745	9/30/16	3/6/17	Scaffold	SC	SAMEA2298754	GCA_900097915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/915/GCA_900097915.1_12291_8_55	-	T MSSA 02 (S)
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.80784	32.8	-	FMPC01	34	2946	2760	9/30/16	3/6/17	Scaffold	SC	SAMEA2298751	GCA_900097925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/925/GCA_900097925.1_12291_8_52	-	MSSAT026
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.14594	39.7	-	FZDR01	51	2325	2003	6/25/17	7/5/17	Scaffold	SC	SAMEA2626859	GCA_900194985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/985/GCA_900194985.1_13681_2_24	-	3063STDY5801800
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	1.9964	39.7	-	FZDL01	29	2199	1991	6/25/17	7/5/17	Scaffold	SC	SAMEA2626860	GCA_900194995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/194/995/GCA_900194995.1_13681_1_25	-	3063STDY5801801
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.83427	32.7	-	FMPD01	17	2997	2876	9/30/16	3/6/17	Scaffold	SC	SAMEA2298719	GCA_900097935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/935/GCA_900097935.1_12291_8_20	-	MSSAT120
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.76946	32.8	-	FMPE01	10	2919	2767	9/30/16	3/6/17	Scaffold	SC	SAMEA2298737	GCA_900097945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/097/945/GCA_900097945.1_12291_8_38	-	type strain: MRSA079A
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.05648	39.6	-	FZDN01	27	2241	2013	6/25/17	7/5/17	Scaffold	SC	SAMEA2626858	GCA_900195005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/005/GCA_900195005.1_13681_1_23	-	3063STDY5801799
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.02208	39.6	-	FZDU01	33	2233	2000	6/25/17	7/5/17	Scaffold	SC	SAMEA2626861	GCA_900195015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/015/GCA_900195015.1_13681_2_26	-	3063STDY5801802
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.83038	32.7	-	FMQA01	65	2940	2779	9/30/16	3/6/17	Scaffold	SC	SAMEA1708919	GCA_900098165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/165/GCA_900098165.1_9119_2_69	-	GKP138-33
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.83919	32.7	-	FMQB01	44	2965	2809	9/30/16	3/6/17	Scaffold	SC	SAMEA1709002	GCA_900098175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/175/GCA_900098175.1_9119_2_43	-	GKP136-76
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.09162	39.5	-	FZDS01	26	2277	2043	6/25/17	7/5/17	Scaffold	SC	SAMEA2626862	GCA_900195025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/025/GCA_900195025.1_13681_1_27	-	3063STDY5801803
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.13945	39.6	-	FZDW01	35	2355	2121	6/25/17	7/5/17	Scaffold	SC	SAMEA2626864	GCA_900195035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/035/GCA_900195035.1_13681_1_29	-	3063STDY5801805
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.78404	32.7	-	FMQG01	48	2890	2737	9/30/16	3/6/17	Scaffold	SC	SAMEA1708803	GCA_900098235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/235/GCA_900098235.1_9119_2_25	-	GKP136-43
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.75523	32.8	-	FMQJ01	58	2881	2683	9/30/16	3/6/17	Scaffold	SC	SAMEA1708861	GCA_900098265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/265/GCA_900098265.1_9119_2_22	-	GKP136-35
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.101	39.5	-	FZDV01	37	2309	2076	6/25/17	7/5/17	Scaffold	SC	SAMEA2626863	GCA_900195045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/045/GCA_900195045.1_13681_1_28	-	3063STDY5801804
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.09315	39.6	-	FZDT01	34	2294	2056	6/25/17	7/5/17	Scaffold	SC	SAMEA2626865	GCA_900195055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/055/GCA_900195055.1_13681_1_30	-	3063STDY5801806
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.67668	32.7	-	FMQL01	161	2745	2592	9/30/16	3/6/17	Scaffold	SC	SAMEA1708691	GCA_900098285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/285/GCA_900098285.1_9119_2_89	-	GKP138-78
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.70867	32.7	-	FMQN01	42	2782	2622	9/30/16	3/6/17	Scaffold	SC	SAMEA1709011	GCA_900098305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/305/GCA_900098305.1_9119_2_41	-	GKP136-72
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.09666	39.6	-	FZDX01	31	2291	2073	6/25/17	7/5/17	Scaffold	SC	SAMEA2626866	GCA_900195065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/065/GCA_900195065.1_13681_1_31	-	3063STDY5801807
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.07778	39.6	-	FZDZ01	44	2265	2015	6/25/17	7/5/17	Scaffold	SC	SAMEA2626877	GCA_900195075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/075/GCA_900195075.1_13681_1_42	-	3063STDY5801818
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.76155	32.7	-	FMRI01	33	2911	2677	9/30/16	3/6/17	Scaffold	SC	SAMEA1708940	GCA_900098495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/495/GCA_900098495.1_9119_2_84	-	GKP138-71
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.69677	32.8	-	FMRV01	60	2754	2598	9/30/16	3/6/17	Scaffold	SC	SAMEA1708785	GCA_900098625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/625/GCA_900098625.1_9119_2_9	-	GKP136-4
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.03171	39.7	-	FZDY01	27	2237	2030	6/25/17	7/5/17	Scaffold	SC	SAMEA2682048	GCA_900195085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/085/GCA_900195085.1_14937_1_17	-	3063STDY5861119
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.11894	39.6	-	FZEC01	33	2369	2116	6/25/17	7/5/17	Scaffold	SC	SAMEA2626872	GCA_900195095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/095/GCA_900195095.1_13681_2_37	-	3063STDY5801813
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.76977	32.8	-	FMSG01	8	2921	2761	10/5/16	3/6/17	Scaffold	SC	SAMEA2298727	GCA_900098645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/645/GCA_900098645.1_12291_8_28	-	MRSA012TB
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.68833	32.8	-	FMRZ01	53	2788	2615	9/30/16	3/6/17	Scaffold	SC	SAMEA1708748	GCA_900098695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/695/GCA_900098695.1_9119_2_58	-	GKP138-19A
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.08142	39.5	-	FZEF01	30	2261	2029	6/25/17	7/5/17	Scaffold	SC	SAMEA2626874	GCA_900195105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/105/GCA_900195105.1_13681_2_39	-	3063STDY5801815
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	1.97843	39.7	-	FZEM01	22	2169	1959	6/25/17	7/5/17	Scaffold	SC	SAMEA2626878	GCA_900195115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/115/GCA_900195115.1_13681_1_43	-	3063STDY5801819
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.82556	32.7	-	FQDB01	29	2975	2823	11/23/16	3/6/17	Scaffold	SC	SAMEA3448981	GCA_900124655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/655/GCA_900124655.1_17138_2_12	-	3688STDY6124971
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79655	32.7	-	FQDD01	31	2876	2727	11/23/16	3/6/17	Scaffold	SC	SAMEA3448983	GCA_900124675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/675/GCA_900124675.1_17138_2_14	-	3688STDY6124973
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.03871	39.6	-	FZEI01	32	2260	2024	6/25/17	7/5/17	Scaffold	SC	SAMEA2626869	GCA_900195125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/125/GCA_900195125.1_13681_1_34	-	3063STDY5801810
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.09521	39.6	-	FZEB01	30	2292	2053	6/25/17	7/5/17	Scaffold	SC	SAMEA2626873	GCA_900195135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/135/GCA_900195135.1_13681_2_38	-	3063STDY5801814
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.7799	32.7	-	FQDC01	13	2921	2746	11/23/16	3/6/17	Scaffold	SC	SAMEA3448984	GCA_900124685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/685/GCA_900124685.1_17138_2_15	-	3688STDY6124974
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.83766	32.8	-	FQDL01	36	2941	2780	11/23/16	3/8/17	Scaffold	SC	SAMEA3448992	GCA_900124765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/765/GCA_900124765.1_17138_2_23	-	3688STDY6124982
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.093	39.6	-	FZEA01	28	2337	2073	6/25/17	7/5/17	Scaffold	SC	SAMEA2626871	GCA_900195145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/145/GCA_900195145.1_13681_1_36	-	3063STDY5801812
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.06154	39.6	-	FZEN01	37	2268	1998	6/25/17	7/5/17	Scaffold	SC	SAMEA2626868	GCA_900195155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/155/GCA_900195155.1_13681_1_33	-	3063STDY5801809
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.78863	32.7	-	FQDN01	18	2917	2762	11/23/16	3/6/17	Scaffold	SC	SAMEA3448994	GCA_900124785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/785/GCA_900124785.1_17138_2_25	-	3688STDY6124984
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.84697	32.6	-	FQDO01	11	2998	2827	11/23/16	3/6/17	Scaffold	SC	SAMEA3448996	GCA_900124795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/795/GCA_900124795.1_17138_2_27	-	3688STDY6124986
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	1.97805	39.7	-	FZEG01	21	2162	1947	6/25/17	7/5/17	Scaffold	SC	SAMEA2626879	GCA_900195165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/165/GCA_900195165.1_13681_2_44	-	3063STDY5801820
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.08934	39.6	-	FZEE01	45	2311	2063	6/25/17	7/5/17	Scaffold	SC	SAMEA2626876	GCA_900195175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/175/GCA_900195175.1_13681_1_41	-	3063STDY5801817
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.8068	32.7	-	FQDP01	19	2959	2809	11/23/16	3/8/17	Scaffold	SC	SAMEA3448998	GCA_900124805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/805/GCA_900124805.1_17138_2_29	-	3688STDY6124988
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.83223	32.8	-	FQDQ01	40	2947	2783	11/23/16	3/6/17	Scaffold	SC	SAMEA3448972	GCA_900124815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/815/GCA_900124815.1_17138_2_3	-	3688STDY6124962
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.08842	39.5	-	FZED01	36	2277	2050	6/25/17	7/5/17	Scaffold	SC	SAMEA2626880	GCA_900195185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/185/GCA_900195185.1_13681_1_45	-	3063STDY5801821
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.05683	39.6	-	FZEK01	25	2275	2050	6/25/17	7/5/17	Scaffold	SC	SAMEA2626875	GCA_900195195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/195/GCA_900195195.1_13681_1_40	-	3063STDY5801816
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.75699	32.8	-	FQDS01	23	2877	2724	11/23/16	3/6/17	Scaffold	SC	SAMEA3449000	GCA_900124835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/835/GCA_900124835.1_17138_2_31	-	3688STDY6124990
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.80036	32.7	-	FQDT01	31	2884	2731	11/23/16	3/8/17	Scaffold	SC	SAMEA3449002	GCA_900124845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/845/GCA_900124845.1_17138_2_33	-	3688STDY6124992
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.06206	39.5	-	FZEL01	31	2248	2015	6/25/17	7/5/17	Scaffold	SC	SAMEA2626884	GCA_900195205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/205/GCA_900195205.1_13681_1_49	-	3063STDY5801825
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.09445	39.5	-	FZEJ01	31	2279	2036	6/25/17	7/5/17	Scaffold	SC	SAMEA2626885	GCA_900195215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/215/GCA_900195215.1_13681_2_50	-	3063STDY5801826
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79435	32.7	-	FQDV01	30	2880	2725	11/23/16	3/6/17	Scaffold	SC	SAMEA3449006	GCA_900124865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/865/GCA_900124865.1_17138_2_37	-	3688STDY6124996
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.83579	32.8	-	FQDY01	30	2939	2783	11/23/16	3/6/17	Scaffold	SC	SAMEA3449007	GCA_900124875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/875/GCA_900124875.1_17138_2_38	-	3688STDY6124997
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.16174	39.6	-	FZEP01	80	2366	2038	6/25/17	7/5/17	Scaffold	SC	SAMEA2626883	GCA_900195225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/225/GCA_900195225.1_13681_1_48	-	3063STDY5801824
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	1.98878	39.7	-	FZEO01	27	2210	1981	6/25/17	7/5/17	Scaffold	SC	SAMEA2626886	GCA_900195235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/235/GCA_900195235.1_13681_2_51	-	3063STDY5801827
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79428	32.7	-	FQEB01	29	2878	2724	11/23/16	3/6/17	Scaffold	SC	SAMEA3449011	GCA_900124925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/925/GCA_900124925.1_17138_2_42	-	3688STDY6125001
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.78698	32.8	-	FQED01	21	2893	2724	11/23/16	3/6/17	Scaffold	SC	SAMEA3449013	GCA_900124935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/935/GCA_900124935.1_17138_2_44	-	3688STDY6125005
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.08061	39.5	-	FZER01	37	2254	2029	6/25/17	7/5/17	Scaffold	SC	SAMEA2626887	GCA_900195245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/245/GCA_900195245.1_13681_2_52	-	3063STDY5801828
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.05913	39.6	-	FZEQ01	35	2237	2020	6/25/17	7/5/17	Scaffold	SC	SAMEA2626888	GCA_900195255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/255/GCA_900195255.1_13681_1_53	-	3063STDY5801829
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.76254	32.7	-	FQEH01	15	2864	2709	11/23/16	3/8/17	Scaffold	SC	SAMEA3449018	GCA_900124985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/985/GCA_900124985.1_17138_2_49	-	3688STDY6125010
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.65216	32.8	-	FQEI01	16	2707	2561	11/23/16	3/6/17	Scaffold	SC	SAMEA3448974	GCA_900124995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/124/995/GCA_900124995.1_17138_2_5	-	3688STDY6124964
Streptococcus pneumoniae	1313	PRJEB6332	259729	Terrabacteria group	Firmicutes	2.13539	39.6	-	FZES01	93	2377	2118	6/25/17	7/5/17	Scaffold	SC	SAMEA2682050	GCA_900195265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/195/265/GCA_900195265.1_14937_1_19	-	3063STDY5861127
Streptococcus pneumoniae	1313	PRJNA304320	304320	Terrabacteria group	Firmicutes	2.12619	39.8	chromosome:CP016227.1	-	1	2359	2125	6/28/16	6/28/16	Chromosome	University of Kaiserslautern	SAMN04320984	GCA_001677235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/677/235/GCA_001677235.1_ASM167723v1	-	D219
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.82973	32.8	-	FQEJ01	37	2961	2780	11/23/16	3/8/17	Scaffold	SC	SAMEA3449019	GCA_900125005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/005/GCA_900125005.1_17138_2_50	-	3688STDY6125011
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.796	32.7	-	FQEM01	35	2873	2719	11/23/16	3/6/17	Scaffold	SC	SAMEA3449020	GCA_900125015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/015/GCA_900125015.1_17138_2_51	-	3688STDY6125012
Streptococcus pneumoniae	1313	PRJNA304320	304320	Terrabacteria group	Firmicutes	2.08812	39.9	chromosome:CP016632.2	-	1	2271	2064	8/29/16	3/24/17	Chromosome	University of Kaiserslautern	SAMN04320589	GCA_001715525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/715/525/GCA_001715525.2_ASM171552v2	-	D122
Streptococcus pneumoniae SP3-BS71	406556	PRJNA17957	17957	Terrabacteria group	Firmicutes	2.03268	39.8	-	AAZZ01	24	2421	2378	5/22/07	11/6/13	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393743	GCA_000170015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/015/GCA_000170015.1_ASM17001v1	17675389	SP3-BS71
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79679	32.7	-	FQEK01	28	2883	2728	11/23/16	3/8/17	Scaffold	SC	SAMEA3449021	GCA_900125025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/025/GCA_900125025.1_17138_2_52	-	3688STDY6125013
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.74923	32.8	-	FQEL01	16	2876	2716	11/23/16	3/6/17	Scaffold	SC	SAMEA3449022	GCA_900125035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/035/GCA_900125035.1_17138_2_53	-	3688STDY6125014
Streptococcus pneumoniae SP6-BS73	406557	PRJNA17959	17959	Terrabacteria group	Firmicutes	2.16151	39.6	-	ABAA01	38	2555	2507	5/22/07	11/6/13	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393744	GCA_000170035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/035/GCA_000170035.1_ASM17003v1	17675389	SP6-BS73
Streptococcus pneumoniae SP14-BS69	406560	PRJNA17965	17965	Terrabacteria group	Firmicutes	2.14629	39.6	-	ABAD01	49	2846	2807	5/18/07	11/6/13	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393747	GCA_000170095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/095/GCA_000170095.1_ASM17009v1	17675389	SP14-BS69
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.74799	32.7	-	FQEO01	18	2881	2713	11/23/16	3/6/17	Scaffold	SC	SAMEA3449024	GCA_900125055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/055/GCA_900125055.1_17138_2_55	-	3688STDY6125016
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79573	32.7	-	FQET01	29	2881	2724	11/23/16	3/6/17	Scaffold	SC	SAMEA3449030	GCA_900125105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/105/GCA_900125105.1_17138_2_61	-	3688STDY6125022
Streptococcus pneumoniae SP18-BS74	406561	PRJNA17967	17967	Terrabacteria group	Firmicutes	2.10455	39.7	-	ABAE01	28	2453	2415	5/18/07	11/6/13	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393748	GCA_000170115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/115/GCA_000170115.1_ASM17011v1	17675389	SP18-BS74
Streptococcus pneumoniae SP19-BS75	406562	PRJNA17969	17969	Terrabacteria group	Firmicutes	2.13532	39.6	-	ABAF01	30	2520	2480	5/18/07	11/6/13	Contig	"Center for Genomic Sciences, Allegheny-Singer Research Institute"	SAMN02393749	GCA_000170135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/170/135/GCA_000170135.1_ASM17013v1	17675389	SP19-BS75
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.67986	32.7	-	FQEU01	20	2773	2623	11/23/16	3/6/17	Scaffold	SC	SAMEA3449031	GCA_900125115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/115/GCA_900125115.1_17138_2_62	-	3688STDY6125023
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.72348	32.7	-	FQEY01	19	2833	2670	11/23/16	3/6/17	Scaffold	SC	SAMEA3449037	GCA_900125155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/155/GCA_900125155.1_17138_2_68	-	3688STDY6125029
Streptococcus pneumoniae CDC1087-00	453361	PRJNA20777	20777	Terrabacteria group	Firmicutes	2.18796	39.8	-	ABFT01	75	2270	1763	9/20/07	11/19/13	Contig	J. Craig Venter Institute	SAMN00000219	GCA_000171595.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/171/595/GCA_000171595.1_ASM17159v1	-	CDC1087-00
Streptococcus pneumoniae 06-01-003MEF	882855	PRJNA51961	51961	Terrabacteria group	Firmicutes	2.104	38.5	-	AEGF01	343	-	-	9/13/10	1/8/14	Contig	Yale University	SAMN02472136	GCA_000179855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/179/855/GCA_000179855.1_ASM17985v1	-	06-01-003MEF
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79215	32.7	-	FQFA01	30	2880	2729	11/23/16	3/6/17	Scaffold	SC	SAMEA3448976	GCA_900125175.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/175/GCA_900125175.1_17138_2_7	-	3688STDY6124966
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.77979	32.7	-	FQFB01	27	2910	2760	11/23/16	3/6/17	Scaffold	SC	SAMEA3449039	GCA_900125185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/185/GCA_900125185.1_17138_2_70	-	3688STDY6125031
Streptococcus pneumoniae GA17570	760791	PRJNA48739	48739	Terrabacteria group	Firmicutes	2.11982	39.7	-	AFGB01	9	2342	2267	5/3/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792760	GCA_000211895.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/211/895/GCA_000211895.2_ASM21189v2	-	GA17570
Streptococcus pneumoniae GA47368	760834	PRJNA48859	48859	Terrabacteria group	Firmicutes	2.17723	39.6	-	AFGS01	8	2389	2312	5/5/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792663	GCA_000212535.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/212/535/GCA_000212535.2_ASM21253v2	-	GA47368
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.78088	32.7	-	FQFC01	20	2870	2687	11/23/16	3/6/17	Scaffold	SC	SAMEA3449040	GCA_900125195.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/195/GCA_900125195.1_17138_2_71	-	3688STDY6125032
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.80032	32.7	-	FQFD01	32	2884	2732	11/23/16	3/8/17	Scaffold	SC	SAMEA3449041	GCA_900125205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/205/GCA_900125205.1_17138_2_72	-	3688STDY6125033
Streptococcus pneumoniae GA11184	760760	PRJNA48677	48677	Terrabacteria group	Firmicutes	2.11372	39.7	-	AGNU01	20	2274	2201	10/25/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792729	GCA_000231945.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/231/945/GCA_000231945.2_ASM23194v2	-	GA11184
Streptococcus pneumoniae GA16531	760781	PRJNA48719	48719	Terrabacteria group	Firmicutes	2.13748	39.9	-	AGOE01	16	2427	2333	10/25/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792750	GCA_000232145.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/145/GCA_000232145.2_ASM23214v2	-	GA16531
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.73739	32.7	-	FQFE01	21	2857	2691	11/23/16	3/6/17	Scaffold	SC	SAMEA3449042	GCA_900125215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/215/GCA_900125215.1_17138_2_73	-	3688STDY6125034
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79925	32.7	-	FQFH01	32	2883	2734	11/23/16	3/6/17	Scaffold	SC	SAMEA3449045	GCA_900125245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/245/GCA_900125245.1_17138_2_76	-	3688STDY6125037
Streptococcus pneumoniae GA44500	760826	PRJNA48841	48841	Terrabacteria group	Firmicutes	2.18524	39.6	-	AGOI01	17	2460	2389	10/25/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792796	GCA_000232225.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/225/GCA_000232225.2_ASM23222v2	-	GA44500
Streptococcus pneumoniae GA41410	760811	PRJNA48781	48781	Terrabacteria group	Firmicutes	2.20761	39.6	-	AGOJ01	16	2592	2514	10/25/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792780	GCA_000232245.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/245/GCA_000232245.2_ASM23224v2	-	GA41410
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79129	32.7	-	FQFI01	15	2960	2788	11/23/16	3/6/17	Scaffold	SC	SAMEA3449046	GCA_900125255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/255/GCA_900125255.1_17138_2_77	-	3688STDY6125038
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79437	32.7	-	FQFK01	28	2878	2729	11/23/16	3/8/17	Scaffold	SC	SAMEA3449047	GCA_900125265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/265/GCA_900125265.1_17138_2_78	-	3688STDY6125039
Streptococcus pneumoniae GA49447	760854	PRJNA48899	48899	Terrabacteria group	Firmicutes	2.19953	39.7	-	AGOK01	20	2411	2320	10/25/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792684	GCA_000232265.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/265/GCA_000232265.2_ASM23226v2	-	GA49447
Streptococcus pneumoniae GA41538	760813	PRJNA48785	48785	Terrabacteria group	Firmicutes	2.10595	39.8	-	AGOL01	14	2401	2306	10/25/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792782	GCA_000232285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/285/GCA_000232285.2_ASM23228v2	-	GA41538
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79207	32.7	-	FQFJ01	32	2876	2722	11/23/16	3/8/17	Scaffold	SC	SAMEA3448977	GCA_900125275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/275/GCA_900125275.1_17138_2_8	-	3688STDY6124967
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79982	32.7	-	FQFL01	33	2888	2734	11/23/16	3/6/17	Scaffold	SC	SAMEA3449049	GCA_900125285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/285/GCA_900125285.1_17138_2_80	-	3688STDY6125041
Streptococcus pneumoniae GA18523	760795	PRJNA48747	48747	Terrabacteria group	Firmicutes	2.10412	39.9	-	AGOO01	14	2269	2178	10/25/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792764	GCA_000232345.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/345/GCA_000232345.2_ASM23234v2	-	GA18523
Streptococcus pneumoniae GA44194	760821	PRJNA48831	48831	Terrabacteria group	Firmicutes	2.10685	39.7	-	AGOP01	11	2260	2186	10/25/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792791	GCA_000232365.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/365/GCA_000232365.2_ASM23236v2	-	GA44194
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79402	32.7	-	FQFM01	31	2876	2723	11/23/16	3/8/17	Scaffold	SC	SAMEA3449050	GCA_900125295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/295/GCA_900125295.1_17138_2_81	-	3688STDY6125042
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.75552	32.7	-	FQFP01	23	2879	2733	11/23/16	3/6/17	Scaffold	SC	SAMEA3449051	GCA_900125305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/305/GCA_900125305.1_17138_2_82	-	3688STDY6125043
Streptococcus pneumoniae GA11304	760763	PRJNA48683	48683	Terrabacteria group	Firmicutes	2.15025	39.6	-	AGOU01	15	2371	2288	10/25/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792730	GCA_000232465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/465/GCA_000232465.2_ASM23246v2	-	GA11304
Streptococcus pneumoniae GA11663	760765	PRJNA48687	48687	Terrabacteria group	Firmicutes	2.17234	39.5	-	AGOW01	13	2401	2316	10/25/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792733	GCA_000232505.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/505/GCA_000232505.2_ASM23250v2	-	GA11663
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.80163	32.7	-	FQFN01	16	2933	2779	11/23/16	3/8/17	Scaffold	SC	SAMEA3449054	GCA_900125325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/325/GCA_900125325.1_17138_2_85	-	3688STDY6125046
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.74024	32.7	-	FQFQ01	14	2852	2705	11/23/16	3/6/17	Scaffold	SC	SAMEA3449055	GCA_900125335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/335/GCA_900125335.1_17138_2_86	-	3688STDY6125047
Streptococcus pneumoniae GA13338	760769	PRJNA48695	48695	Terrabacteria group	Firmicutes	2.12461	39.6	-	AGOX01	15	2325	2235	10/25/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792736	GCA_000232525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/525/GCA_000232525.2_ASM23252v2	-	GA13338
Streptococcus pneumoniae GA13494	760772	PRJNA48701	48701	Terrabacteria group	Firmicutes	2.21228	39.7	-	AGOZ01	15	2506	2415	10/25/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792739	GCA_000232565.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/565/GCA_000232565.2_ASM23256v2	-	GA13494
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.75653	32.7	-	FQFR01	13	2856	2707	11/23/16	3/6/17	Scaffold	SC	SAMEA3449056	GCA_900125345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/345/GCA_900125345.1_17138_2_87	-	3688STDY6125048
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.81813	32.7	-	FQFS01	48	2928	2764	11/23/16	3/6/17	Scaffold	SC	SAMEA3448978	GCA_900125355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/355/GCA_900125355.1_17138_2_9	-	3688STDY6124968
Streptococcus pneumoniae GA14798	760778	PRJNA48713	48713	Terrabacteria group	Firmicutes	2.10565	39.9	-	AGPC01	14	2247	2156	10/25/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792747	GCA_000232625.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/625/GCA_000232625.2_ASM23262v2	-	GA14798
Streptococcus pneumoniae GA16121	760779	PRJNA48715	48715	Terrabacteria group	Firmicutes	2.14703	39.8	-	AGPD01	7	2348	2263	10/25/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792748	GCA_000232645.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/645/GCA_000232645.2_ASM23264v2	-	GA16121
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.84227	32.8	-	FQFU01	35	2951	2802	11/23/16	3/6/17	Scaffold	SC	SAMEA3448835	GCA_900125375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/375/GCA_900125375.1_17175_1_30	-	3688STDY6124814
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.96405	32.6	-	FQFW01	47	3095	2946	11/23/16	3/6/17	Scaffold	SC	SAMEA3448838	GCA_900125395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/395/GCA_900125395.1_17175_1_33	-	3688STDY6124817
Streptococcus pneumoniae GA16833	760782	PRJNA48721	48721	Terrabacteria group	Firmicutes	2.10776	39.8	-	AGPF01	12	2499	2423	10/25/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792751	GCA_000232685.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/685/GCA_000232685.2_ASM23268v2	-	GA16833
Streptococcus pneumoniae GA17227	760784	PRJNA48725	48725	Terrabacteria group	Firmicutes	2.16569	39.6	-	AGPG01	11	2413	2332	10/25/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792752	GCA_000232705.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/705/GCA_000232705.2_ASM23270v2	-	GA17227
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79515	32.7	-	FQFX01	32	2878	2719	11/23/16	3/6/17	Scaffold	SC	SAMEA3448839	GCA_900125405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/405/GCA_900125405.1_17175_1_34	-	3688STDY6124818
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79389	32.7	-	FQGB01	30	2878	2725	11/23/16	3/8/17	Scaffold	SC	SAMEA3448842	GCA_900125435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/435/GCA_900125435.1_17175_1_37	-	3688STDY6124821
Streptococcus pneumoniae GA17328	760790	PRJNA48737	48737	Terrabacteria group	Firmicutes	2.20799	39.7	-	AGPH01	17	2427	2345	10/25/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792755	GCA_000232725.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/725/GCA_000232725.2_ASM23272v2	-	GA17328
Streptococcus pneumoniae GA17371	760786	PRJNA48729	48729	Terrabacteria group	Firmicutes	2.08721	39.8	-	AGPI01	16	2264	2198	10/25/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792756	GCA_000232745.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/745/GCA_000232745.2_ASM23274v2	-	GA17371
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79736	32.7	-	FQGE01	39	2876	2722	11/23/16	3/6/17	Scaffold	SC	SAMEA3448845	GCA_900125455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/455/GCA_900125455.1_17175_1_40	-	3688STDY6124824
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.78939	32.7	-	FQGG01	30	2877	2715	11/23/16	3/8/17	Scaffold	SC	SAMEA3448848	GCA_900125485.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/485/GCA_900125485.1_17175_1_43	-	3688STDY6124827
Streptococcus pneumoniae GA17971	760793	PRJNA48743	48743	Terrabacteria group	Firmicutes	2.12261	39.7	-	AGPJ01	10	2412	2328	10/25/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792762	GCA_000232765.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/765/GCA_000232765.2_ASM23276v2	-	GA17971
Streptococcus pneumoniae GA19077	760797	PRJNA48751	48751	Terrabacteria group	Firmicutes	2.15679	39.7	-	AGPK01	12	2367	2290	10/25/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792766	GCA_000232785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/785/GCA_000232785.2_ASM23278v2	-	GA19077
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.78762	32.7	-	FQGI01	27	2872	2719	11/23/16	3/6/17	Scaffold	SC	SAMEA3448854	GCA_900125535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/535/GCA_900125535.1_17175_1_49	-	3688STDY6124833
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.73955	32.7	-	FQGL01	18	2888	2712	11/23/16	3/6/17	Scaffold	SC	SAMEA3448857	GCA_900125545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/545/GCA_900125545.1_17175_1_52	-	3688STDY6124836
Streptococcus pneumoniae GA41277	760808	PRJNA48775	48775	Terrabacteria group	Firmicutes	2.19286	39.7	-	AGPM01	13	2430	2346	10/25/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792777	GCA_000232825.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/825/GCA_000232825.2_ASM23282v2	-	GA41277
Streptococcus pneumoniae GA41437	760812	PRJNA48783	48783	Terrabacteria group	Firmicutes	2.15539	39.7	-	AGPN01	15	2387	2301	10/25/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792781	GCA_000232845.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/845/GCA_000232845.2_ASM23284v2	-	GA41437
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79726	32.7	-	FQGN01	35	2868	2728	11/23/16	3/6/17	Scaffold	SC	SAMEA3448859	GCA_900125575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/575/GCA_900125575.1_17175_1_54	-	3688STDY6124838
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.75726	32.6	-	FQGT01	12	2861	2689	11/23/16	3/6/17	Scaffold	SC	SAMEA3448866	GCA_900125625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/625/GCA_900125625.1_17175_1_61	-	3688STDY6124845
Streptococcus pneumoniae GA41565	760814	PRJNA48787	48787	Terrabacteria group	Firmicutes	2.20721	39.5	-	AGPO01	9	2399	2314	10/25/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792783	GCA_000232865.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/865/GCA_000232865.2_ASM23286v2	-	GA41565
Streptococcus pneumoniae GA41688	760815	PRJNA48789	48789	Terrabacteria group	Firmicutes	2.10803	39.6	-	AGPP01	11	2277	2210	10/25/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792784	GCA_000232885.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/885/GCA_000232885.2_ASM23288v2	-	GA41688
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.72175	32.7	-	FQGU01	15	2853	2691	11/23/16	3/6/17	Scaffold	SC	SAMEA3448868	GCA_900125635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/635/GCA_900125635.1_17175_1_63	-	3688STDY6124847
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.85248	32.8	-	FQGV01	64	2972	2795	11/23/16	3/6/17	Scaffold	SC	SAMEA3448869	GCA_900125645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/645/GCA_900125645.1_17175_1_64	-	3688STDY6124848
Streptococcus pneumoniae GA43380	760819	PRJNA48797	48797	Terrabacteria group	Firmicutes	2.08315	39.6	-	AGPQ01	12	2248	2176	10/25/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792789	GCA_000232905.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/905/GCA_000232905.2_ASM23290v2	-	GA43380
Streptococcus pneumoniae GA47283	760832	PRJNA48855	48855	Terrabacteria group	Firmicutes	2.06195	40	-	AGPR01	16	2282	2201	10/25/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792661	GCA_000232925.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/232/925/GCA_000232925.2_ASM23292v2	-	GA47283
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.80106	32.7	-	FQGW01	32	2876	2723	11/23/16	3/6/17	Scaffold	SC	SAMEA3448870	GCA_900125655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/655/GCA_900125655.1_17175_1_65	-	3688STDY6124849
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.77134	32.7	-	FQHC01	20	2941	2761	11/23/16	3/6/17	Scaffold	SC	SAMEA3448879	GCA_900125715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/715/GCA_900125715.1_17175_1_74	-	3688STDY6124858
Streptococcus pneumoniae GA47778	760847	PRJNA48885	48885	Terrabacteria group	Firmicutes	2.08185	39.9	-	AGPX01	18	2248	2166	10/25/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792677	GCA_000233045.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/045/GCA_000233045.2_ASM23304v2	-	GA47778
Streptococcus pneumoniae GA54644	760859	PRJNA48911	48911	Terrabacteria group	Firmicutes	2.12832	39.7	-	AGQA01	7	2350	2266	10/25/11	3/1/12	Contig	Institute for Genome Sciences	SAMN00792690	GCA_000233105.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/105/GCA_000233105.2_ASM23310v2	-	GA54644
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.73534	32.7	-	FQHH01	12	2857	2689	11/23/16	3/6/17	Scaffold	SC	SAMEA3449397	GCA_900125745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/745/GCA_900125745.1_17175_1_78	-	3688STDY6124862
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.73866	32.7	-	FQHI01	14	2858	2691	11/23/16	3/6/17	Scaffold	SC	SAMEA3449396	GCA_900125755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/755/GCA_900125755.1_17175_1_77	-	3688STDY6124861
Streptococcus pneumoniae GA13224	760767	PRJNA48691	48691	Terrabacteria group	Firmicutes	2.08705	39.8	-	AIKB01	19	2263	2186	3/7/12	11/19/13	Contig	Institute for Genome Sciences	SAMN00717551	GCA_000251425.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/425/GCA_000251425.2_ASM25142v2	-	GA13224
Streptococcus pneumoniae GA13723	760774	PRJNA48705	48705	Terrabacteria group	Firmicutes	2.10926	39.7	-	AILM01	18	2578	2503	3/7/12	11/19/13	Contig	Institute for Genome Sciences	SAMN00738291	GCA_000251465.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/465/GCA_000251465.2_ASM25146v2	-	GA13723
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.69798	32.7	-	FQHF01	22	2801	2642	11/23/16	3/6/17	Scaffold	SC	SAMEA3449399	GCA_900125765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/765/GCA_900125765.1_17175_1_80	-	3688STDY6124864
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.81613	32.7	-	FQHJ01	24	2962	2807	11/23/16	3/6/17	Scaffold	SC	SAMEA3449400	GCA_900125785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/785/GCA_900125785.1_17175_1_81	-	3688STDY6124865
Streptococcus pneumoniae GA17457	760787	PRJNA48731	48731	Terrabacteria group	Firmicutes	2.09871	39.7	-	AILS01	17	2371	2296	3/7/12	1/8/14	Contig	Institute for Genome Sciences	SAMN02471185	GCA_000251525.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/251/525/GCA_000251525.2_ASM25152v2	-	GA17457
Streptococcus pneumoniae 7879-04	760870	PRJNA48933	48933	Terrabacteria group	Firmicutes	2.07583	39.9	-	AIKD01	9	2228	2153	3/7/12	11/19/13	Contig	Institute for Genome Sciences	SAMN00668056	GCA_000252005.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/005/GCA_000252005.2_ASM25200v2	-	7879-04
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.72141	32.7	-	FQHM01	18	2826	2658	11/23/16	3/8/17	Scaffold	SC	SAMEA3449404	GCA_900125815.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/815/GCA_900125815.1_17175_1_85	-	3688STDY6124869
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.80461	32.8	-	FQHO01	30	2964	2805	11/23/16	3/6/17	Scaffold	SC	SAMEA3448883	GCA_900125835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/835/GCA_900125835.1_17175_2_1	-	3688STDY6124872
Streptococcus pneumoniae EU-NP05	760881	PRJNA48955	48955	Terrabacteria group	Firmicutes	2.09698	39.6	-	AIJW01	24	2215	2170	3/7/12	11/19/13	Contig	Institute for Genome Sciences	SAMN00717398	GCA_000252285.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/252/285/GCA_000252285.2_ASM25228v2	-	EU-NP05
Streptococcus pneumoniae 2090008	914148	PRJNA59939	59939	Terrabacteria group	Firmicutes	2.13514	39.5	-	ALAW01	40	2421	2355	7/16/12	1/8/14	Contig	"Academic Medical Center Amsterdam, The Netherlands"	SAMN02471536	GCA_000278745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/745/GCA_000278745.1_ASM27874v1	-	2090008
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79647	32.7	-	FQHP01	32	2877	2721	11/23/16	3/6/17	Scaffold	SC	SAMEA3448895	GCA_900125845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/845/GCA_900125845.1_17175_2_13	-	3688STDY6124884
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79214	32.7	-	FQHX01	28	2880	2715	11/23/16	3/8/17	Scaffold	SC	SAMEA3448909	GCA_900125935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/935/GCA_900125935.1_17175_2_27	-	3688STDY6124898
Streptococcus pneumoniae 2070108	914140	PRJNA59923	59923	Terrabacteria group	Firmicutes	2.00076	39.8	-	ALAZ01	31	2210	2136	7/16/12	1/8/14	Contig	"Academic Medical Center Amsterdam, The Netherlands"	SAMN02471524	GCA_000278805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/805/GCA_000278805.1_ASM27880v1	-	2070108
Streptococcus pneumoniae 2070335	914141	PRJNA59925	59925	Terrabacteria group	Firmicutes	2.14615	39.6	-	ALBB01	41	2929	2850	7/16/12	1/8/14	Contig	"Academic Medical Center Amsterdam, The Netherlands"	SAMN02471527	GCA_000278845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/845/GCA_000278845.1_ASM27884v1	-	2070335
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79948	32.7	-	FQIB01	33	2881	2726	11/23/16	3/6/17	Scaffold	SC	SAMEA3448912	GCA_900125975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/975/GCA_900125975.1_17175_2_30	-	3688STDY6124901
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.72461	32.7	-	FQIC01	15	2836	2672	11/23/16	3/6/17	Scaffold	SC	SAMEA3448913	GCA_900125985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/125/985/GCA_900125985.1_17175_2_31	-	3688STDY6124902
Streptococcus pneumoniae 2070768	914134	PRJNA59911	59911	Terrabacteria group	Firmicutes	2.05169	39.6	-	ALBE01	31	2352	2280	7/16/12	1/8/14	Contig	"Academic Medical Center Amsterdam, The Netherlands"	SAMN02471528	GCA_000278905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/905/GCA_000278905.1_ASM27890v1	-	2070768
Streptococcus pneumoniae 2072047	914136	PRJNA59915	59915	Terrabacteria group	Firmicutes	2.06402	39.7	-	ALBF01	37	2487	2412	7/16/12	1/8/14	Contig	"Academic Medical Center Amsterdam, The Netherlands"	SAMN02471529	GCA_000278925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/278/925/GCA_000278925.1_ASM27892v1	-	2072047
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.7655	32.8	-	FQIE01	16	2902	2751	11/23/16	3/6/17	Scaffold	SC	SAMEA3448915	GCA_900126005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/005/GCA_900126005.1_17175_2_33	-	3688STDY6124904
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79526	32.7	-	FQIF01	35	2881	2731	11/23/16	3/6/17	Scaffold	SC	SAMEA3448916	GCA_900126015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/015/GCA_900126015.1_17175_2_34	-	3688STDY6124905
Streptococcus pneumoniae 2071247	914143	PRJNA59929	59929	Terrabacteria group	Firmicutes	2.02287	39.7	-	ALBK01	21	2209	2145	7/16/12	1/8/14	Contig	"Academic Medical Center Amsterdam, The Netherlands"	SAMN02471531	GCA_000279025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/025/GCA_000279025.1_ASM27902v1	-	2071247
Streptococcus pneumoniae 2081074	914137	PRJNA59917	59917	Terrabacteria group	Firmicutes	2.06312	39.7	-	ALBM01	26	2282	2220	7/16/12	1/8/14	Contig	"Academic Medical Center Amsterdam, The Netherlands"	SAMN02471543	GCA_000279065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/065/GCA_000279065.1_ASM27906v1	-	2081074
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.68709	32.8	-	FQIG01	15	2783	2639	11/23/16	3/6/17	Scaffold	SC	SAMEA3448917	GCA_900126025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/025/GCA_900126025.1_17175_2_35	-	3688STDY6124906
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.77901	32.7	-	FQIK01	25	2906	2752	11/23/16	3/6/17	Scaffold	SC	SAMEA3448921	GCA_900126055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/055/GCA_900126055.1_17175_2_39	-	3688STDY6124911
Streptococcus pneumoniae 2082170	914146	PRJNA59935	59935	Terrabacteria group	Firmicutes	2.13291	39.5	-	ALBO01	26	2362	2280	7/16/12	1/8/14	Contig	"Academic Medical Center Amsterdam, The Netherlands"	SAMN02471534	GCA_000279105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/105/GCA_000279105.1_ASM27910v1	-	2082170
Streptococcus pneumoniae SPAR27	1159209	PRJNA89129	89129	Terrabacteria group	Firmicutes	2.04557	39.8	-	ALCC01	11	2210	2135	7/18/12	11/19/13	Contig	Institute for Genome Sciences	SAMN00811266	GCA_000279615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/615/GCA_000279615.1_ASM27961v1	-	SPAR27
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79543	32.7	-	FQIJ01	17	2922	2761	11/23/16	3/6/17	Scaffold	SC	SAMEA3448886	GCA_900126065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/065/GCA_900126065.1_17175_2_4	-	3688STDY6124875
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.7834	32.8	-	FQIP01	15	2906	2757	11/23/16	3/6/17	Scaffold	SC	SAMEA3448926	GCA_900126115.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/115/GCA_900126115.1_17175_2_44	-	3688STDY6124916
Streptococcus pneumoniae SPAR95	1159212	PRJNA89133	89133	Terrabacteria group	Firmicutes	2.11525	39.8	-	ALCD01	17	2279	2192	7/18/12	11/19/13	Contig	Institute for Genome Sciences	SAMN00811275	GCA_000279635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/635/GCA_000279635.1_ASM27963v1	-	SPAR95
Streptococcus pneumoniae SPAR48	1159210	PRJNA89131	89131	Terrabacteria group	Firmicutes	2.16219	39.7	-	ALCE01	9	2318	2241	7/18/12	11/19/13	Contig	Institute for Genome Sciences	SAMN00811273	GCA_000279655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/655/GCA_000279655.1_ASM27965v1	-	SPAR48
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.76919	32.7	-	FQIR01	17	2927	2769	11/23/16	3/6/17	Scaffold	SC	SAMEA3448930	GCA_900126135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/135/GCA_900126135.1_17175_2_48	-	3688STDY6124920
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.78475	32.7	-	FQIX01	19	2922	2771	11/23/16	3/6/17	Scaffold	SC	SAMEA3448935	GCA_900126185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/185/GCA_900126185.1_17175_2_53	-	3688STDY6124925
Streptococcus pneumoniae SPAR55	1159211	PRJNA89135	89135	Terrabacteria group	Firmicutes	2.15162	39.7	-	ALCF01	12	2358	2280	7/18/12	11/19/13	Contig	Institute for Genome Sciences	SAMN00811270	GCA_000279675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/279/675/GCA_000279675.1_ASM27967v1	-	SPAR55
Streptococcus pneumoniae 1488	1239789	PRJNA176677	176677	Terrabacteria group	Firmicutes	2.15894	39.4	-	AQTQ01	293	2268	2248	4/30/13	1/8/14	Contig	"Research Institute of Physical-Chemical Medicine, Moscow, Russia"	SAMN02470836	GCA_000385675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/675/GCA_000385675.1_ASM38567v1	-	1488
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.7778	32.8	-	FQIW01	24	2886	2739	11/23/16	3/8/17	Scaffold	SC	SAMEA3448937	GCA_900126205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/205/GCA_900126205.1_17175_2_55	-	3688STDY6124927
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.72768	32.7	-	FQIY01	17	2838	2634	11/23/16	3/6/17	Scaffold	SC	SAMEA3448939	GCA_900126215.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/215/GCA_900126215.1_17175_2_57	-	3688STDY6124929
Streptococcus pneumoniae 1542	1239788	PRJNA176678	176678	Terrabacteria group	Firmicutes	2.0139	39.7	-	AQTR01	207	2069	2051	4/30/13	1/8/14	Contig	"Research Institute of Physical-Chemical Medicine, Moscow, Russia"	SAMN02470855	GCA_000385695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/695/GCA_000385695.1_ASM38569v1	-	1542
Streptococcus pneumoniae 3051	1239787	PRJNA176679	176679	Terrabacteria group	Firmicutes	2.0939	39.6	-	AQTS01	265	2251	2233	4/30/13	1/8/14	Contig	"Research Institute of Physical-Chemical Medicine, Moscow, Russia"	SAMN02470849	GCA_000385715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/715/GCA_000385715.1_ASM38571v1	-	3051
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.78685	32.7	-	FQIZ01	20	2937	2774	11/23/16	3/6/17	Scaffold	SC	SAMEA3448940	GCA_900126225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/225/GCA_900126225.1_17175_2_58	-	3688STDY6124930
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.74321	32.7	-	FQJB01	18	2877	2708	11/23/16	3/6/17	Scaffold	SC	SAMEA3448888	GCA_900126245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/245/GCA_900126245.1_17175_2_6	-	3688STDY6124877
Streptococcus pneumoniae 845	1239790	PRJNA176676	176676	Terrabacteria group	Firmicutes	2.11311	39.6	-	AQTP01	165	2246	2228	4/30/13	1/8/14	Contig	"Research Institute of Physical-Chemical Medicine, Moscow, Russia"	SAMN02470845	GCA_000385735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/735/GCA_000385735.1_ASM38573v1	-	845
Streptococcus pneumoniae 801	1239786	PRJNA176675	176675	Terrabacteria group	Firmicutes	2.12071	39.7	-	AQTO01	138	2268	2249	4/30/13	1/8/14	Contig	"Research Institute of Physical-Chemical Medicine, Moscow, Russia"	SAMN02470835	GCA_000385755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/755/GCA_000385755.1_ASM38575v1	-	801
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.74116	32.7	-	FQJC01	12	2862	2702	11/23/16	3/6/17	Scaffold	SC	SAMEA3448942	GCA_900126255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/255/GCA_900126255.1_17175_2_60	-	3688STDY6124932
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.97532	32.7	-	FQJD01	60	3130	2949	11/23/16	3/6/17	Scaffold	SC	SAMEA3448943	GCA_900126265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/265/GCA_900126265.1_17175_2_61	-	3688STDY6124933
Streptococcus pneumoniae 357	1238422	PRJNA176476	176476	Terrabacteria group	Firmicutes	2.10629	39.4	-	AQTM01	142	2180	2162	4/30/13	1/8/14	Contig	Research Institute for Physical-Chemical Medicine of Ministry of Public Health of Russian Federation	SAMN02470834	GCA_000385775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/775/GCA_000385775.1_ASM38577v1	-	357
Streptococcus pneumoniae 2009	1239791	PRJNA176674	176674	Terrabacteria group	Firmicutes	2.03098	39.7	-	AQTN01	136	2164	2142	4/30/13	1/8/14	Contig	"Research Institute of Physical-Chemical Medicine, Moscow, Russia"	SAMN02470853	GCA_000385795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/385/795/GCA_000385795.1_ASM38579v1	-	2009
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79995	32.7	-	FQJF01	29	2885	2730	11/23/16	3/6/17	Scaffold	SC	SAMEA3448945	GCA_900126285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/285/GCA_900126285.1_17175_2_63	-	3688STDY6124935
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.78142	32.7	-	FQJH01	18	2946	2775	11/23/16	3/6/17	Scaffold	SC	SAMEA3448947	GCA_900126305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/305/GCA_900126305.1_17175_2_65	-	3688STDY6124937
Streptococcus pneumoniae 1779n23_04	1340497	PRJNA206047	206047	Terrabacteria group	Firmicutes	2.12305	39.4	-	ASZY01	110	2155	1901	7/16/13	1/8/14	Contig	Research Institute of Physical-Chemical Medicine	SAMN02470844	GCA_000430325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/430/325/GCA_000430325.1_Spn.str1779n23-04_v1.0	-	1779n23_04
Streptococcus pneumoniae 13856	1415762	PRJNA225874	225874	Terrabacteria group	Firmicutes	2.12293	39.7	-	AYRK02	149	2212	2017	12/11/13	12/15/15	Contig	"Research Institute of Physical-Chemical Medicine, Moscow, Russia"	SAMN02470840	GCA_000506605.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/506/605/GCA_000506605.2_Spn.str13856_v2.0	26563895	13856
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.77958	32.8	-	FQJJ01	33	2909	2722	11/23/16	3/6/17	Scaffold	SC	SAMEA3448949	GCA_900126325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/325/GCA_900126325.1_17175_2_67	-	3688STDY6124939
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.98469	32.7	-	FQJP01	53	3134	2979	11/23/16	3/6/17	Scaffold	SC	SAMEA3448955	GCA_900126375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/375/GCA_900126375.1_17175_2_73	-	3688STDY6124945
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	0.361755	39.5	-	CLMH01	15	381	373	3/21/15	6/13/15	Contig	SC	SAMEA1028781	GCA_001157745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/745/GCA_001157745.1_6938_7_19	-	SMRU2707
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.4877	39.9	-	CRGJ01	43	2422	2384	3/23/15	6/14/15	Contig	SC	SAMEA1025289	GCA_001209105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/209/105/GCA_001209105.1_6736_6_1	-	SMRU1249
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.80171	32.7	-	FQJU01	33	2889	2735	11/23/16	3/6/17	Scaffold	SC	SAMEA3448963	GCA_900126435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/435/GCA_900126435.1_17175_2_81	-	3688STDY6124953
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	3.00401	32.7	-	FQJW01	40	3161	3002	11/23/16	3/6/17	Scaffold	SC	SAMEA3448965	GCA_900126455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/455/GCA_900126455.1_17175_2_83	-	3688STDY6124955
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	4.03093	43.7	-	CHTU01	13	4066	3989	4/21/15	6/13/15	Contig	SC	SAMEA1025530	GCA_001342275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/342/275/GCA_001342275.1_6755_6_9	-	type strain: N
Streptococcus pneumoniae	1313	PRJNA309764	309764	Terrabacteria group	Firmicutes	2.47356	39.9	-	LRSN01	237	2607	2415	2/2/16	4/6/16	Contig	Emek Medical center	SAMN04440609	GCA_001545505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/545/505/GCA_001545505.1_ASM154550v1	27034491	225994
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.77507	32.9	-	FQKA01	33	2899	2718	11/23/16	3/6/17	Scaffold	SC	SAMEA3448891	GCA_900126495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/495/GCA_900126495.1_17175_2_9	-	3688STDY6124880
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.74818	32.7	-	FQKB01	18	2897	2717	11/23/16	3/6/17	Scaffold	SC	SAMEA3449057	GCA_900126505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/505/GCA_900126505.1_17175_3_1	-	3688STDY6125049
Streptococcus pneumoniae	1313	PRJNA310270	310270	Terrabacteria group	Firmicutes	2.46376	39.9	-	LRTZ01	237	2606	2412	2/8/16	4/6/16	Contig	Emek Medical center	SAMN04448866	GCA_001553495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/495/GCA_001553495.1_ASM155349v1	27034491	224896
Streptococcus pneumoniae	1313	PRJNA302716	302716	Terrabacteria group	Firmicutes	2.09276	39.6	-	LRDQ01	320	2155	1934	7/5/16	7/5/16	Contig	TAILORED-Treatment project	SAMN04420267	GCA_001679515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/679/515/GCA_001679515.1_ASM167951v1	-	CCUG 28588
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79824	32.7	-	FQKE01	11	2935	2779	11/23/16	3/6/17	Scaffold	SC	SAMEA3449068	GCA_900126535.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/535/GCA_900126535.1_17175_3_12	-	3688STDY6125060
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79625	32.7	-	FQKH01	28	2889	2725	11/23/16	3/6/17	Scaffold	SC	SAMEA3449059	GCA_900126635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/635/GCA_900126635.1_17175_3_3	-	3688STDY6125051
Streptococcus pneumoniae	1313	PRJNA315442	315442	Terrabacteria group	Firmicutes	2.11904	39.6	-	MLGH01	112	2230	2031	11/2/16	11/2/16	Contig	University of Toronto	SAMN04559946	GCA_001860645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/860/645/GCA_001860645.1_ASM186064v1	-	SP18
Streptococcus pneumoniae B1598	1449970	PRJNA235270	235270	Terrabacteria group	Firmicutes	2.90257	39.8	-	JBOV01	158	3120	2218	8/11/17	8/11/17	Contig	Carnegie Mellon University	SAMN02691898	GCA_002249745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/745/GCA_002249745.1_ASM224974v1	-	B1598
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.75329	32.7	-	FQKS01	16	2882	2717	11/23/16	3/6/17	Scaffold	SC	SAMEA3449103	GCA_900126755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/755/GCA_900126755.1_17175_3_47	-	3688STDY6125101
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.80138	32.7	-	FQKV01	36	2883	2725	11/24/16	3/6/17	Scaffold	SC	SAMEA3449106	GCA_900126765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/126/765/GCA_900126765.1_17175_3_50	-	3688STDY6125104
Streptococcus pneumoniae B1599	1449971	PRJNA235271	235271	Terrabacteria group	Firmicutes	2.42287	39.6	-	JBOW01	38	2602	2108	8/11/17	8/11/17	Contig	Carnegie Mellon University	SAMN02691899	GCA_002249765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/249/765/GCA_002249765.1_ASM224976v1	-	B1599
Streptococcus pneumoniae	1313	PRJEB2417	203865	Terrabacteria group	Firmicutes	2.03085	39.6	-	FYWA01	55	2101	2065	6/25/17	6/25/17	Contig	SC	SAMEA1026813	GCA_900193005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/193/005/GCA_900193005.1_6569_8_1	-	UoS5051
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.74007	32.7	-	FQMK01	19	2884	2708	11/23/16	3/6/17	Scaffold	SC	SAMEA3449064	GCA_900127015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/015/GCA_900127015.1_17175_3_8	-	3688STDY6125056
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.80549	32.7	-	FQMY01	33	2892	2733	11/24/16	3/6/17	Scaffold	SC	SAMEA3449143	GCA_900127095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/095/GCA_900127095.1_17175_3_87	-	3688STDY6125141
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	4.04242	38.7	-	CVOF01	3933	3322	3223	4/22/15	6/14/15	Scaffold	SC	SAMEA1025972	GCA_000983055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/055/GCA_000983055.1_6871_2_16	-	28F
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.95513	39.1	-	CVOG01	1887	2696	2584	4/22/15	6/13/15	Scaffold	SC	SAMEA2061941	GCA_000983075.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/983/075/GCA_000983075.2_9803_7_79	-	14
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.73165	32.7	-	FQNA01	16	2873	2695	11/24/16	3/6/17	Scaffold	SC	SAMEA3449144	GCA_900127105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/105/GCA_900127105.1_17175_3_88	-	3688STDY6125142
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79211	32.8	-	FQPD01	34	2872	2719	11/25/16	3/8/17	Scaffold	SC	SAMEA3448970	GCA_900127635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/635/GCA_900127635.1_17138_2_1	-	3688STDY6124960
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.75974	39.4	-	CLRF01	496	2708	2582	3/21/15	6/13/15	Scaffold	SC	SAMEA1028776	GCA_001083385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/385/GCA_001083385.1_6972_2_17	-	SMRU2561
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	3.97154	38.5	-	CLMB01	2513	3569	3474	3/21/15	6/13/15	Scaffold	SC	SAMEA1029153	GCA_001083665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/083/665/GCA_001083665.1_6938_7_1	-	SMRU2689
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.85275	32.3	-	FQPG01	14	2883	2709	11/25/16	3/8/17	Scaffold	SC	SAMEA3448988	GCA_900127675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/675/GCA_900127675.1_17138_2_19	-	3688STDY6124978
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.80278	32.8	-	FQPM01	32	2887	2722	11/25/16	3/8/17	Scaffold	SC	SAMEA3448995	GCA_900127685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/685/GCA_900127685.1_17138_2_26	-	3688STDY6124985
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	1.77922	40.3	-	CLCV01	1935	1531	1503	3/21/15	6/13/15	Scaffold	SC	SAMEA1025876	GCA_001084225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/084/225/GCA_001084225.1_6871_2_9	-	SMRU1833
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	3.31453	38.9	-	CLGE01	592	3276	3166	3/21/15	6/13/15	Scaffold	SC	SAMEA1026157	GCA_001086105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/105/GCA_001086105.1_6925_3_6	-	SMRU2118
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79991	32.7	-	FQPH01	32	2883	2729	11/25/16	3/8/17	Scaffold	SC	SAMEA3449001	GCA_900127705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/705/GCA_900127705.1_17138_2_32	-	3688STDY6124991
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79054	32.7	-	FQPK01	18	2959	2783	11/25/16	3/8/17	Scaffold	SC	SAMEA3449025	GCA_900127735.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/735/GCA_900127735.1_17138_2_56	-	3688STDY6125017
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	7.25333	36.5	-	CLFU01	315	7143	7083	3/21/15	6/13/15	Scaffold	SC	SAMEA1025724	GCA_001086305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/086/305/GCA_001086305.1_6925_3_12	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	6.24185	37.6	-	CKWJ01	1636	5688	5647	3/21/15	6/13/15	Scaffold	SC	SAMEA1025952	GCA_001087605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/087/605/GCA_001087605.1_6823_5_16	-	SMRU1960
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.83705	32.8	-	FQPS01	32	2939	2785	11/25/16	3/8/17	Scaffold	SC	SAMEA3449038	GCA_900127765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/765/GCA_900127765.1_17138_2_69	-	3688STDY6125030
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79681	32.7	-	FQPR01	30	2879	2729	11/25/16	3/8/17	Scaffold	SC	SAMEA3449048	GCA_900127775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/775/GCA_900127775.1_17138_2_79	-	3688STDY6125040
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	3.40713	38.8	-	CKTQ01	1842	3126	2974	3/21/15	6/13/15	Scaffold	SC	SAMEA1026084	GCA_001092225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/092/225/GCA_001092225.1_6823_1_8	-	SMRU1856
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.69884	39.4	-	CKVP01	786	2607	2493	3/21/15	6/14/15	Scaffold	SC	SAMEA1026022	GCA_001094605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/094/605/GCA_001094605.1_6823_4_19	-	SMRU1939
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79634	32.7	-	FQPQ01	31	2878	2727	11/25/16	3/8/17	Scaffold	SC	SAMEA3449052	GCA_900127785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/785/GCA_900127785.1_17138_2_83	-	3688STDY6125044
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.73266	32.7	-	FQPT01	17	2867	2692	11/25/16	3/8/17	Scaffold	SC	SAMEA3448834	GCA_900127795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/795/GCA_900127795.1_17175_1_29	-	3688STDY6124813
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	7.33657	36.4	-	CLNH01	123	7382	7324	3/21/15	6/14/15	Scaffold	SC	SAMEA1029092	GCA_001095665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/095/665/GCA_001095665.1_6938_8_10	-	SMRU2722
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.87146	39.8	-	CKMN01	2356	1547	1541	3/21/15	6/13/15	Scaffold	SC	SAMEA1888672	GCA_001097405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/097/405/GCA_001097405.1_6649_7_24	-	SMRU552
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.77855	32.7	-	FQTE01	9	2889	2733	12/2/16	3/8/17	Scaffold	SC	SAMEA3448860	GCA_900127825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/825/GCA_900127825.1_17175_1_55	-	3688STDY6124839
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.76836	32.7	-	FQPX01	24	2889	2722	11/25/16	3/8/17	Scaffold	SC	SAMEA3448851	GCA_900127835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/835/GCA_900127835.1_17175_1_46	-	3688STDY6124830
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	3.11177	39.1	-	CKVY01	709	3041	2940	3/21/15	6/13/15	Scaffold	SC	SAMEA1025980	GCA_001098365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/365/GCA_001098365.1_6823_4_3	-	SMRU1923
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.98114	39.7	-	CKMC01	1741	1740	1719	3/21/15	6/13/15	Scaffold	SC	SAMEA1888693	GCA_001098405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/405/GCA_001098405.1_6649_7_22	-	SMRU550
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.80013	32.7	-	FQPY01	30	2882	2729	11/25/16	3/8/17	Scaffold	SC	SAMEA3448867	GCA_900127865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/865/GCA_900127865.1_17175_1_62	-	3688STDY6124846
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.82724	32.7	-	FQQE01	25	3000	2835	11/25/16	3/8/17	Scaffold	SC	SAMEA3448882	GCA_900127915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/915/GCA_900127915.1_17175_1_87	-	3688STDY6124871
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	3.55908	39.2	-	CMAP01	1765	3303	3158	3/21/15	6/14/15	Scaffold	SC	SAMEA1028825	GCA_001098865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/098/865/GCA_001098865.1_7004_5_24	-	SMRU2880
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.87843	39.8	-	CKLU01	2570	1680	1664	3/21/15	6/13/15	Scaffold	SC	SAMEA1888682	GCA_001099385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/099/385/GCA_001099385.1_6649_7_1	-	SMRU529
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.80158	32.7	-	FQQG01	23	2909	2752	11/25/16	3/8/17	Scaffold	SC	SAMEA3448894	GCA_900127935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/935/GCA_900127935.1_17175_2_12	-	3688STDY6124883
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.80085	32.7	-	FQQF01	33	2882	2731	11/25/16	3/8/17	Scaffold	SC	SAMEA3448893	GCA_900127945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/945/GCA_900127945.1_17175_2_11	-	3688STDY6124882
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.0648	40	-	CPSM01	166	2000	1969	3/23/15	6/14/15	Scaffold	SC	SAMEA682442	GCA_001100085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/100/085/GCA_001100085.1_5366_3_9	-	08B04572
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	7.16047	37	-	CKTY01	1439	6763	6702	3/21/15	6/13/15	Scaffold	SC	SAMEA1026068	GCA_001103125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/125/GCA_001103125.1_6823_1_9	-	SMRU1857
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.82078	32.8	-	FQQH01	20	2972	2805	11/25/16	3/8/17	Scaffold	SC	SAMEA3448898	GCA_900127955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/955/GCA_900127955.1_17175_2_16	-	3688STDY6124887
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79674	32.7	-	FQQK01	30	2880	2725	11/25/16	3/8/17	Scaffold	SC	SAMEA3448904	GCA_900127985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/127/985/GCA_900127985.1_17175_2_22	-	3688STDY6124893
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.03938	39.5	-	CKMK01	1477	1815	1787	3/21/15	6/13/15	Scaffold	SC	SAMEA1888673	GCA_001103405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/103/405/GCA_001103405.1_6649_7_9	-	SMRU537
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.64192	39.3	-	CMDP01	391	2645	2522	3/21/15	6/13/15	Scaffold	SC	SAMEA1028712	GCA_001106205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/106/205/GCA_001106205.1_7011_3_23	-	SMRU2759
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.71279	32.7	-	FQQM01	18	2806	2665	11/25/16	3/8/17	Scaffold	SC	SAMEA3448907	GCA_900128005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/005/GCA_900128005.1_17175_2_25	-	3688STDY6124896
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79756	32.7	-	FQQN01	29	2892	2737	11/25/16	3/8/17	Scaffold	SC	SAMEA3448919	GCA_900128015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/015/GCA_900128015.1_17175_2_37	-	3688STDY6124909
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	7.37701	36.4	-	CKVN01	157	7406	7360	3/21/15	6/14/15	Scaffold	SC	SAMEA1025912	GCA_001107345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/345/GCA_001107345.1_6823_4_17	-	SMRU1937
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.0359	39.8	-	CKMI01	761	1914	1871	3/21/15	6/13/15	Scaffold	SC	SAMEA1888674	GCA_001107545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/107/545/GCA_001107545.1_6649_7_7	-	SMRU535
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.71806	32.7	-	FQQP01	15	2828	2673	11/25/16	3/8/17	Scaffold	SC	SAMEA3448928	GCA_900128035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/035/GCA_900128035.1_17175_2_46	-	3688STDY6124918
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.75292	32.7	-	FQQQ01	13	2880	2715	11/25/16	3/8/17	Scaffold	SC	SAMEA3448887	GCA_900128045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/045/GCA_900128045.1_17175_2_5	-	3688STDY6124876
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	3.0796	40.1	-	CPMI01	2910	2925	2889	3/23/15	6/14/15	Scaffold	SC	SAMEA1019964	GCA_001109805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/109/805/GCA_001109805.1_6237_8_19	-	S-166
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	2.54151	39.6	-	CMTL01	1240	2360	2337	3/23/15	6/14/15	Scaffold	SC	SAMEA1022769	GCA_001111025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/111/025/GCA_001111025.1_5737_2_9	-	16287
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79398	32.7	-	FQQT01	29	2879	2726	11/25/16	3/8/17	Scaffold	SC	SAMEA3448951	GCA_900128075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/075/GCA_900128075.1_17175_2_69	-	3688STDY6124941
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79914	32.7	-	FQQV01	32	2874	2719	11/25/16	3/8/17	Scaffold	SC	SAMEA3448958	GCA_900128085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/085/GCA_900128085.1_17175_2_76	-	3688STDY6124948
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	6.74568	56.3	-	CLJU01	299	6380	6286	3/21/15	6/13/15	Scaffold	SC	SAMEA1029104	GCA_001112405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/112/405/GCA_001112405.1_6925_8_15	-	SMRU2535
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.41749	39.5	-	CLHB01	246	2429	2309	3/21/15	6/13/15	Scaffold	SC	SAMEA1025743	GCA_001113585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/113/585/GCA_001113585.1_6925_4_3	-	SMRU2139
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.79897	32.7	-	FQQW01	32	2883	2734	11/25/16	3/8/17	Scaffold	SC	SAMEA3448961	GCA_900128105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/105/GCA_900128105.1_17175_2_79	-	3688STDY6124951
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.75482	32.7	-	FQRP01	23	2877	2732	11/25/16	3/8/17	Scaffold	SC	SAMEA3449105	GCA_900128295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/295/GCA_900128295.1_17175_3_49	-	3688STDY6125103
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.06526	39.4	-	CKLN01	1462	1847	1810	3/21/15	6/13/15	Scaffold	SC	SAMEA1888679	GCA_001114785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/114/785/GCA_001114785.1_6649_7_11	-	SMRU539
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.76023	38.9	-	CMQD01	1401	2501	2450	3/22/15	6/13/15	Scaffold	SC	SAMEA2061935	GCA_001115045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/045/GCA_001115045.1_9803_7_70	-	type strain: N
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.71721	32.7	-	FQTC01	9	2836	2674	12/2/16	3/8/17	Scaffold	SC	SAMEA3449109	GCA_900128315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/315/GCA_900128315.1_17175_3_53	-	3688STDY6125107
Staphylococcus aureus	1280	PRJEB9575	298706	Terrabacteria group	Firmicutes	2.67745	32.7	-	FQTI01	8	2771	2610	12/2/16	3/8/17	Scaffold	SC	SAMEA3449065	GCA_900128375.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/375/GCA_900128375.1_17175_3_9	-	3688STDY6125057
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.05654	39.6	-	CKMB01	2065	1738	1699	3/21/15	6/13/15	Scaffold	SC	SAMEA1888671	GCA_001115305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/305/GCA_001115305.1_6649_7_10	-	SMRU538
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.93625	40.7	-	CKAG01	1514	1630	1607	3/21/15	6/13/15	Scaffold	SC	SAMEA974616	GCA_001115385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/115/385/GCA_001115385.1_6259_6_11	-	19B
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.75089	32.3	-	FQTK01	9	2742	2562	12/2/16	3/8/17	Scaffold	SC	SAMEA2710365	GCA_900128605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/605/GCA_900128605.1_14672_5_58	-	2588STDY5962135
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.80187	32.3	-	FQSN01	15	2806	2622	11/26/16	3/8/17	Scaffold	SC	SAMEA2662160	GCA_900128615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/615/GCA_900128615.1_14324_3_50	-	2588STDY5890733
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	7.04064	37	-	CKUR01	889	6702	6631	3/21/15	6/13/15	Scaffold	SC	SAMEA1025744	GCA_001117205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/205/GCA_001117205.1_6823_2_7	-	SMRU1879
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	1.84912	39.7	-	CRKB01	1536	1714	1684	3/22/15	6/13/15	Scaffold	SC	SAMEA1025133	GCA_001117525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/525/GCA_001117525.1_6753_3_18	-	14
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.75302	32.3	-	FQTL01	6	2734	2559	12/2/16	3/8/17	Scaffold	SC	SAMEA2661974	GCA_900128625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/625/GCA_900128625.1_14355_3_74	-	2588STDY5890661
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.79044	32.3	-	FQSK01	11	2796	2619	11/26/16	3/8/17	Scaffold	SC	SAMEA2662140	GCA_900128635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/635/GCA_900128635.1_14355_3_43	-	2588STDY5890629
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	3.02653	39.5	-	CMKA01	683	2974	2950	3/22/15	6/13/15	Scaffold	SC	SAMEA1025957	GCA_001117705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/705/GCA_001117705.1_7038_8_46	-	19A
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	5.64196	35.5	-	CMPU01	844	5517	5489	3/23/15	6/14/15	Scaffold	SC	SAMEA2061507	GCA_001117785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/117/785/GCA_001117785.1_9803_7_66	-	type strain: N
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.80423	32.3	-	FQSO01	12	2817	2645	11/26/16	3/8/17	Scaffold	SC	SAMEA2662088	GCA_900128645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/645/GCA_900128645.1_14324_3_25	-	2588STDY5890708
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.75552	32.4	-	FQTH01	9	2756	2578	12/2/16	3/6/17	Scaffold	SC	SAMEA2662127	GCA_900128665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/665/GCA_900128665.1_14324_2_20	-	2588STDY5890798
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	5.23496	35.1	-	CKTO01	40	5293	5263	3/21/15	6/14/15	Scaffold	SC	SAMEA1026138	GCA_001118225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/118/225/GCA_001118225.1_6823_1_6	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	3.55199	38.5	-	CKTJ01	1879	3184	3095	3/21/15	6/14/15	Scaffold	SC	SAMEA1026196	GCA_001120025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/025/GCA_001120025.1_6823_1_2	-	SMRU1850
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.79332	32.3	-	FQSL01	12	2796	2618	11/26/16	3/8/17	Scaffold	SC	SAMEA2445518	GCA_900128675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/675/GCA_900128675.1_12971_2_32	-	2588STDY5763869
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.73458	32.3	-	FQTJ01	6	2708	2539	12/2/16	3/8/17	Scaffold	SC	SAMEA2662162	GCA_900128685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/685/GCA_900128685.1_14520_1_13	-	2588STDY5890811
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.7623	40.2	-	CKMG01	2394	1635	1635	3/21/15	6/14/15	Scaffold	SC	SAMEA1888680	GCA_001120165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/165/GCA_001120165.1_6649_7_2	-	19F
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	7.43785	36.4	-	CLCG01	157	7496	7436	3/21/15	6/14/15	Scaffold	SC	SAMEA1026053	GCA_001120425.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/120/425/GCA_001120425.1_6871_2_20	-	SMRU1844
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.71437	32.3	-	FQSJ01	15	2681	2501	11/26/16	3/8/17	Scaffold	SC	SAMEA2662315	GCA_900128695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/695/GCA_900128695.1_14324_2_71	-	2588STDY5890934
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.80448	32.3	-	FQSM01	12	2817	2644	11/26/16	3/8/17	Scaffold	SC	SAMEA2662156	GCA_900128705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/705/GCA_900128705.1_14324_3_49	-	2588STDY5890732
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	6.44745	37.6	-	CLCW01	3059	5810	5674	3/21/15	6/13/15	Scaffold	SC	SAMEA1026033	GCA_001121265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/121/265/GCA_001121265.1_6871_2_21	-	SMRU1845
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	5.30605	35.2	-	CKSJ01	122	5342	5299	3/21/15	6/13/15	Scaffold	SC	SAMEA1026167	GCA_001123805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/123/805/GCA_001123805.1_6823_1_4	-	type strain: N
Staphylococcus aureus	1280	PRJEB1915	268749	Terrabacteria group	Firmicutes	2.77415	32.3	-	FQTG01	8	2780	2604	12/2/16	3/8/17	Scaffold	SC	SAMEA2662291	GCA_900128715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/128/715/GCA_900128715.1_14324_2_63	-	2588STDY5890910
Staphylococcus aureus	1280	PRJEB12840	350474	Terrabacteria group	Firmicutes	2.83265	32.6	-	FSSE01	101	2929	2806	12/16/16	8/21/17	Scaffold	HOSPICES CIVILS DE LYON	SAMEA4535273	GCA_900149325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/325/GCA_900149325.1_SA_ST20121341	-	ST20121341
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	6.7432	36.9	-	CMQU01	2288	6263	6215	3/23/15	6/14/15	Scaffold	SC	SAMEA2061952	GCA_001124745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/124/745/GCA_001124745.1_9803_8_12	-	19F
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.42022	40.2	-	CPKL01	76	2368	2323	3/22/15	6/13/15	Scaffold	SC	SAMEA682266	GCA_001125865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/125/865/GCA_001125865.1_5429_8_2	-	09B09042
Staphylococcus aureus	1280	PRJEB12840	350474	Terrabacteria group	Firmicutes	2.74927	32.7	-	FSSD01	68	2827	2694	12/16/16	8/21/17	Scaffold	HOSPICES CIVILS DE LYON	SAMEA4535272	GCA_900149335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/149/335/GCA_900149335.1_SA_ST20110167	-	ST20110167
Candidatus Carsonella ruddii PC isolate NHV	1202540	PRJNA165191	165191	Proteobacteria	Gammaproteobacteria	0.159923	15.6	chromosome:CP003545.1	-	1	213	182	8/13/12	2/14/14	Complete Genome	Yale University	SAMN02641651	GCA_000287315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/315/GCA_000287315.1_ASM28731v1	-	PC
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	5.92693	42.6	-	CLUP01	335	5768	5700	3/21/15	6/13/15	Scaffold	SC	SAMEA1025813	GCA_001127605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/127/605/GCA_001127605.1_6983_2_16	-	SMRU2224
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.95559	39.8	-	CKME01	2105	1593	1592	3/21/15	6/13/15	Scaffold	SC	SAMEA1888694	GCA_001128205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/205/GCA_001128205.1_6649_7_23	-	SMRU551
Candidatus Nasuia deltocephalinicola	1160784	PRJNA385869	385869	Proteobacteria	Betaproteobacteria	0.144602	15.2	chromosome:CP021173.1	-	1	192	159	9/12/17	9/12/17	Complete Genome	University of Hawaii	SAMN06919537	GCA_002290365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/290/365/GCA_002290365.1_ASM229036v1	-	ENCA
Candidatus Carsonella ruddii	114186	PRJNA362461	362461	Proteobacteria	Gammaproteobacteria	0.173802	14.8	chromosome:CP019943.1	-	1	227	196	3/2/17	3/2/17	Complete Genome	University of Illinois	SAMN06239973	GCA_002009355.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/009/355/GCA_002009355.1_ASM200935v1	-	BC
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.35688	39.8	-	CPSU01	1525	2185	2155	3/23/15	6/13/15	Scaffold	SC	SAMEA1020646	GCA_001128405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/128/405/GCA_001128405.1_6187_4_13	-	S-091
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	5.87368	37.4	-	CLCE01	1522	5486	5436	3/21/15	6/14/15	Scaffold	SC	SAMEA1025998	GCA_001129925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/129/925/GCA_001129925.1_6871_2_19	-	SMRU1843
Candidatus Carsonella ruddii HT isolate Thao2000	1202539	PRJNA165189	165189	Proteobacteria	Gammaproteobacteria	0.157543	14.6	chromosome:NC_018417.1/CP003544.1	-	1	192	166	8/13/12	8/29/15	Complete Genome	Yale University	SAMN02641650	GCA_000287295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/295/GCA_000287295.1_ASM28729v1	22821013	HT
Candidatus Carsonella ruddii CS isolate Thao2000	1202537	PRJNA165183	165183	Proteobacteria	Gammaproteobacteria	0.162504	14.2	chromosome:CP003542.1	-	1	221	190	8/13/12	2/14/14	Complete Genome	Yale University	SAMN02641649	GCA_000287255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/255/GCA_000287255.1_ASM28725v1	-	CS
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	7.34533	36.4	-	CLNT01	195	7342	7280	3/21/15	6/14/15	Scaffold	SC	SAMEA1029066	GCA_001130745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/130/745/GCA_001130745.1_6938_8_8	-	SMRU2720
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	6.18619	37.5	-	CMMW01	3004	5404	5319	3/23/15	6/13/15	Scaffold	SC	SAMEA1029211	GCA_001132125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/125/GCA_001132125.1_7092_6_1	-	46
Candidatus Carsonella ruddii HC isolate Thao2000	1202538	PRJNA165187	165187	Proteobacteria	Gammaproteobacteria	0.166163	14.2	chromosome:CP003543.1	-	1	223	192	8/13/12	1/31/14	Complete Genome	Yale University	SAMN02604335	GCA_000287275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/275/GCA_000287275.1_ASM28727v1	-	HC
Candidatus Carsonella ruddii CE isolate Thao2000	1202536	PRJNA165179	165179	Proteobacteria	Gammaproteobacteria	0.162589	14	chromosome:CP003541.1	-	1	221	190	8/13/12	2/14/14	Complete Genome	Yale University	SAMN02641648	GCA_000287235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/287/235/GCA_000287235.1_ASM28723v1	-	CE
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	1.93678	40.1	-	CRGB01	1754	1682	1674	3/22/15	6/13/15	Scaffold	SC	SAMEA1025447	GCA_001132885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/132/885/GCA_001132885.1_6736_5_14	-	41F
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	1.97779	39.6	-	CLCF01	2567	1686	1674	3/21/15	6/13/15	Scaffold	SC	SAMEA1025864	GCA_001133605.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/605/GCA_001133605.1_6871_2_12	-	23F
Candidatus Zinderia insecticola CARI	871271	PRJNA51243	51243	Proteobacteria	Betaproteobacteria	0.208564	13.5	chromosome:CP002161.1	-	1	236	206	9/9/10	1/31/14	Complete Genome	University of Montana	SAMN02604227	GCA_000147015.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/147/015/GCA_000147015.1_ASM14701v1	-	CARI
Staphylococcus aureus	1280	PRJNA274731	274731	Terrabacteria group	Firmicutes	2.75643	32.7	chromosome:CP010940.1	-	1	2788	2662	2/24/15	8/5/15	Chromosome	University of Pretoria	SAMN03339002	GCA_000934185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/185/GCA_000934185.1_ASM93418v1	-	71A_S11
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.71014	39.5	-	CMBJ01	674	2731	2694	3/21/15	6/13/15	Scaffold	SC	SAMEA1029002	GCA_001133965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/133/965/GCA_001133965.1_7004_6_45	-	SMRU2853
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	2.41901	39.5	-	CMPW01	445	2428	2302	3/23/15	6/13/15	Scaffold	SC	SAMEA2061729	GCA_001134245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/245/GCA_001134245.1_9803_7_72	-	19F
Staphylococcus aureus	1280	PRJNA274731	274731	Terrabacteria group	Firmicutes	2.67218	32.7	chromosome:CP010941.1	-	1	2700	2536	2/24/15	8/5/15	Chromosome	University of Pretoria	SAMN03339003	GCA_000934205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/205/GCA_000934205.1_ASM93420v1	-	SA17_S6
Staphylococcus aureus	1280	PRJNA274731	274731	Terrabacteria group	Firmicutes	2.73086	32.7	chromosome:CP010943.1	-	1	2760	2641	2/24/15	8/5/15	Chromosome	University of Pretoria	SAMN03339012	GCA_000934245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/245/GCA_000934245.1_ASM93424v1	-	144_S7
Streptococcus pneumoniae	1313	PRJEB2340	204143	Terrabacteria group	Firmicutes	4.27508	40.1	-	CNAO01	2075	4146	4096	3/22/15	6/13/15	Scaffold	SC	SAMEA1022797	GCA_001134745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/134/745/GCA_001134745.1_6930_7_9	-	231
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.98278	39.3	-	CKMO01	1396	1769	1749	3/21/15	6/13/15	Scaffold	SC	SAMEA1888690	GCA_001136725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/136/725/GCA_001136725.1_6649_7_5	-	SMRU533
Staphylococcus aureus	1280	PRJNA274731	274731	Terrabacteria group	Firmicutes	2.72652	32.7	chromosome:CP010944.1	-	1	2755	2626	2/24/15	8/5/15	Chromosome	University of Pretoria	SAMN03339013	GCA_000934265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/265/GCA_000934265.1_ASM93426v1	-	79_S10
Staphylococcus aureus	1280	PRJNA274731	274731	Terrabacteria group	Firmicutes	2.78835	32.7	chromosome:CP010952.1	-	1	2831	2675	2/26/15	8/5/15	Chromosome	University of Pretoria	SAMN03343952	GCA_000934925.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/934/925/GCA_000934925.1_ASM93492v1	-	93b_S9
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.91738	40	-	CKMF01	1108	1679	1670	3/21/15	6/13/15	Scaffold	SC	SAMEA1888692	GCA_001139345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/139/345/GCA_001139345.1_6649_7_20	-	SMRU548
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	6.92022	36.6	-	CLYY01	453	6767	6710	3/21/15	6/14/15	Scaffold	SC	SAMEA1028893	GCA_001140065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/140/065/GCA_001140065.1_6983_7_67	-	SMRU2371
Staphylococcus aureus subsp. aureus	46170	PRJNA321122	321122	Terrabacteria group	Firmicutes	3.01276	32.6501	chromosome:CP016855.1; plasmid unnamed1:CP016853.1; plasmid unnamed2:CP016854.1	-	3	3157	3079	8/31/16	8/31/16	Chromosome	Uniformed Services University	SAMN04966150	GCA_001717645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/645/GCA_001717645.1_ASM171764v1	-	5118.N
Staphylococcus aureus M0406	1388269	PRJNA216439	216439	Terrabacteria group	Firmicutes	3.16523	33	-	JCEY01	56	2998	2945	2/4/14	2/5/14	Scaffold	Broad Institute	SAMN02325393	GCA_000555645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/555/645/GCA_000555645.1_Stap_aure_M0406_V1	-	M0406
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	3.00425	39.1	-	CLBL01	993	2941	2822	3/21/15	6/13/15	Scaffold	SC	SAMEA1025766	GCA_001141665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/141/665/GCA_001141665.1_6871_1_14	-	SMRU1790
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.54605	39.1	-	CPMV01	726	2399	2361	3/23/15	6/13/15	Scaffold	SC	SAMEA682575	GCA_001146585.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/146/585/GCA_001146585.1_5477_6_2	-	HK01_0168
Staphylococcus aureus subsp. aureus	46170	PRJNA321114	321114	Terrabacteria group	Firmicutes	3.03752	32.7	-	MCID01	3	3911	3831	9/20/16	9/20/16	Scaffold	Uniformed Services University	SAMN04966138	GCA_001735645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/735/645/GCA_001735645.1_ASM173564v1	-	1626.CO1
Staphylococcus aureus subsp. aureus	46170	PRJNA321117	321117	Terrabacteria group	Firmicutes	2.9532	32.7	-	MCIE01	2	2944	2872	9/20/16	9/20/16	Scaffold	Uniformed Services University	SAMN04966146	GCA_001735655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/735/655/GCA_001735655.1_ASM173565v1	-	3020.CO1
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	5.34021	35.2	-	CLRH01	132	5371	5344	3/21/15	6/13/15	Scaffold	SC	SAMEA1028664	GCA_001149845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/149/845/GCA_001149845.1_6972_2_2	-	38
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.80614	39.4	-	CLYF01	334	2959	2921	3/21/15	6/13/15	Scaffold	SC	SAMEA1028658	GCA_001151845.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/151/845/GCA_001151845.1_6983_6_45	-	SMRU2349
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.23373	33	-	LKZC01	176	2332	2125	1/5/17	1/5/17	Scaffold	USDA-ARS	SAMN03893346	GCA_001936775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/936/775/GCA_001936775.1_UCI11_v1.0	-	ST5:UCI 11
Staphylococcus aureus	1280	PRJNA290378	290378	Terrabacteria group	Firmicutes	2.20042	33	-	LLAT01	138	2298	2159	8/28/17	8/28/17	Scaffold	USDA-ARS	SAMN03893389	GCA_002274715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/274/715/GCA_002274715.1_UCI54_v1.0	-	ST5:UCI 54
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	3.20714	40.2	-	CMBH01	694	3190	3159	3/21/15	6/14/15	Scaffold	SC	SAMEA1029045	GCA_001152625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/625/GCA_001152625.1_7004_6_46	-	SMRU2854
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15126	39.5	-	CKML01	1937	1897	1856	3/21/15	6/12/15	Scaffold	SC	SAMEA1888676	GCA_001152685.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/152/685/GCA_001152685.1_6649_7_6	-	SMRU534
Staphylococcus aureus subsp. aureus str. CF-Marseille	505321	PRJEA28687	28687	Terrabacteria group	Firmicutes	2.82997	32.7	-	CABA01	131	-	-	8/10/08	8/10/08	Contig	"Genomic Research Laboratory, Division of Infectious Diseases, Geneva University Hospitals"	SAMEA2272209	GCA_000180395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/180/395/GCA_000180395.1_ASM18039v1	-	CF-Marseille
Staphylococcus aureus subsp. aureus 21318	904763	PRJNA53679	53679	Terrabacteria group	Firmicutes	2.75814	32.7	-	AFNQ01	74	2763	2723	5/27/11	11/19/13	Contig	J. Craig Venter Institute	SAMN00116886	GCA_000215445.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/215/445/GCA_000215445.2_ASM21544v2	-	21318
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	7.31264	36.5	-	CLPC01	557	7165	7098	3/21/15	6/13/15	Scaffold	SC	SAMEA1028937	GCA_001153025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/153/025/GCA_001153025.1_6949_2_5	-	SMRU2429
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	6.97757	36.9	-	CMSE01	1708	6610	6549	3/22/15	6/12/15	Scaffold	SC	SAMEA1967500	GCA_001155345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/155/345/GCA_001155345.1_9803_8_60	-	type strain: N
Staphylococcus aureus subsp. aureus 21259	904744	PRJNA53641	53641	Terrabacteria group	Firmicutes	2.6979	32.7	-	AFTS01	35	2647	2579	7/27/11	11/19/13	Contig	J. Craig Venter Institute	SAMN00116892	GCA_000221785.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/221/785/GCA_000221785.2_ASM22178v2	-	21259
Staphylococcus aureus subsp. aureus IS-24	904776	PRJNA53787	53787	Terrabacteria group	Firmicutes	2.8789	32.6	-	AHLM01	56	2849	2809	2/8/12	11/19/13	Contig	J. Craig Venter Institute	SAMN00138232	GCA_000247255.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/255/GCA_000247255.2_ASM24725v2	-	IS-24
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	7.25674	36.5	-	CLBR01	501	7171	7116	3/21/15	6/12/15	Scaffold	SC	SAMEA1025770	GCA_001157985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/157/985/GCA_001157985.1_6871_1_24	-	SMRU1800
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	7.67647	36.3	-	CKVR01	722	7550	7482	3/21/15	6/13/15	Scaffold	SC	SAMEA1025847	GCA_001161325.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/161/325/GCA_001161325.1_6823_4_20	-	SMRU1940
Staphylococcus aureus subsp. aureus IS-99	904780	PRJNA53795	53795	Terrabacteria group	Firmicutes	2.91059	32.7	-	AHLQ01	91	2923	2872	2/8/12	12/5/13	Contig	J. Craig Venter Institute	SAMN02436510	GCA_000247295.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/295/GCA_000247295.2_ASM24729v2	-	IS-99
Staphylococcus aureus subsp. aureus IS-55	904777	PRJNA53789	53789	Terrabacteria group	Firmicutes	2.76745	32.7	-	AHLN01	54	2795	2735	2/8/12	11/19/13	Contig	J. Craig Venter Institute	SAMN00189686	GCA_000247315.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/315/GCA_000247315.2_ASM24731v2	-	IS-55
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	6.88302	37.1	-	CLDM01	4094	6088	5957	3/21/15	6/13/15	Scaffold	SC	SAMEA1026093	GCA_001163405.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/163/405/GCA_001163405.1_6899_5_10	-	SMRU2050
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.76602	39.5	-	CMJQ01	663	2719	2686	3/22/15	6/13/15	Scaffold	SC	SAMEA1025971	GCA_001165905.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/165/905/GCA_001165905.1_7038_8_45	-	SMRU2253
Staphylococcus aureus subsp. aureus IS-91	904779	PRJNA53793	53793	Terrabacteria group	Firmicutes	2.89199	32.6	-	AHLP01	49	2904	2851	2/8/12	12/5/13	Contig	J. Craig Venter Institute	SAMN02436367	GCA_000247335.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/247/335/GCA_000247335.2_ASM24733v2	-	IS-91
Staphylococcus aureus subsp. aureus IS-125	904784	PRJNA53803	53803	Terrabacteria group	Firmicutes	3.00108	32.8	-	AHVC01	137	3144	3077	2/15/12	11/19/13	Contig	J. Craig Venter Institute	SAMN00138228	GCA_000259995.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/259/995/GCA_000259995.1_ASM25999v1	-	IS-125
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	2.93636	39.5	-	CRHQ01	1467	2706	2672	3/23/15	6/14/15	Scaffold	SC	SAMEA1025660	GCA_001167265.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/265/GCA_001167265.1_6736_7_6	-	SMRU1278
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	7.27007	36.4	-	CLGJ01	219	7291	7238	3/21/15	6/13/15	Scaffold	SC	SAMEA1026136	GCA_001167805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/167/805/GCA_001167805.1_6925_3_7	-	SMRU2119
Staphylococcus aureus subsp. aureus IS-189	904787	PRJNA53809	53809	Terrabacteria group	Firmicutes	3.10578	32.6	-	AICJ01	82	3195	3132	2/15/12	11/19/13	Contig	J. Craig Venter Institute	SAMN00138230	GCA_000260055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/260/055/GCA_000260055.1_SaureusIS189v1.0	-	IS-189
Staphylococcus aureus PPUKM-261-2009	1235275	PRJNA175856	175856	Terrabacteria group	Firmicutes	2.9563	32.6	-	AMRB01	97	-	-	11/13/12	1/8/14	Contig	UKM Medical Centre	SAMN02471406	GCA_000312965.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/965/GCA_000312965.1_Staaur_17	23405328	PPUKM-261-2009
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.06749	39.9	-	CKEW01	774	1949	1941	3/21/15	6/13/15	Scaffold	SC	SAMEA1023910	GCA_001168245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/168/245/GCA_001168245.1_6630_3_11	-	23F
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.2811	39.8	-	CLCT01	1491	2072	2044	3/21/15	6/13/15	Scaffold	SC	SAMEA1026041	GCA_001169545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/169/545/GCA_001169545.1_6871_2_6	-	SMRU1830
Staphylococcus aureus PPUKM-332-2009	1235276	PRJNA175857	175857	Terrabacteria group	Firmicutes	3.01933	32.6	-	AMRC01	125	-	-	11/13/12	1/8/14	Contig	UKM Medical Centre	SAMN02471407	GCA_000312985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/312/985/GCA_000312985.1_Staaur_18	23405328	PPUKM-332-2009
Staphylococcus aureus PPUKM-775-2009	1235278	PRJNA175859	175859	Terrabacteria group	Firmicutes	3.00099	32.6	-	AMRE01	98	-	-	11/13/12	1/8/14	Contig	UKM Medical Centre	SAMN02471404	GCA_000313005.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/005/GCA_000313005.1_Staaur_20	23405328	PPUKM-775-2009
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	5.73171	35.1	-	CRBU01	210	5793	5769	3/22/15	6/13/15	Scaffold	SC	SAMEA1024881	GCA_001170885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/170/885/GCA_001170885.1_6731_1_21	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	3.88174	39.6	-	CLAW01	1883	3483	3412	3/21/15	6/14/15	Scaffold	SC	SAMEA1025483	GCA_001171305.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/171/305/GCA_001171305.1_6841_7_1	-	SMRU1321
Staphylococcus aureus PPUKM-377-2009	1235277	PRJNA175858	175858	Terrabacteria group	Firmicutes	2.8517	32.7	-	AMRD01	103	-	-	11/13/12	1/8/14	Contig	UKM Medical Centre	SAMN02471405	GCA_000313025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/313/025/GCA_000313025.1_Staaur_19	23405328	PPUKM-377-2009
Staphylococcus aureus subsp. aureus PS187	1323662	PRJNA197438	197438	Terrabacteria group	Firmicutes	2.78108	32.8	-	ARPA01	18	-	-	8/21/13	1/8/14	Contig	"Bioinformatik, Biozentrum, University of Wuerzbrug"	SAMN02469395	GCA_000452885.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/452/885/GCA_000452885.1_ASM45288v1	23965785	PS187
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.1795	39.6	-	CLCA01	2204	1834	1825	3/21/15	6/13/15	Scaffold	SC	SAMEA1025850	GCA_001172625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/172/625/GCA_001172625.1_6871_2_10	-	14
Streptococcus pneumoniae	1313	PRJEB2255	204075	Terrabacteria group	Firmicutes	2.45818	40.3	-	CPNV01	92	2358	2318	3/22/15	6/13/15	Scaffold	SC	SAMEA682603	GCA_001173765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/173/765/GCA_001173765.1_5381_3_5	-	09B07251
Staphylococcus aureus MUF256	1435483	PRJNA231224	231224	Terrabacteria group	Firmicutes	2.78397	32.7	-	AZSE01	58	2817	2433	12/31/13	3/24/14	Contig	"School of Life Sciences, Manipal University"	SAMN02597433	GCA_000512505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/505/GCA_000512505.1_Staphaur1.0	24652982	MUF256
Staphylococcus aureus MUM270	1435481	PRJNA231225	231225	Terrabacteria group	Firmicutes	2.83444	32.8	-	AZSF01	125	2976	2728	12/31/13	3/24/14	Contig	"School of Life Sciences, Manipal University"	SAMN02597434	GCA_000512525.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/525/GCA_000512525.1_Staphaur1.0	24652982	MUM270
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.9036	40.2	-	CKMD01	1978	1553	1518	3/21/15	6/13/15	Scaffold	SC	SAMEA1888688	GCA_001174745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/174/745/GCA_001174745.1_6649_7_4	-	SMRU532
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	7.47599	36.8	-	CRII01	1475	7017	6959	3/22/15	6/13/15	Scaffold	SC	SAMEA1025413	GCA_001193295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/193/295/GCA_001193295.1_6736_8_21	-	SMRU1317
Staphylococcus aureus MUM475	1435482	PRJNA231226	231226	Terrabacteria group	Firmicutes	2.85211	32.7	-	AZSG01	74	2842	2620	12/31/13	3/24/14	Contig	"School of Life Sciences, Manipal University"	SAMN02597435	GCA_000512545.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/512/545/GCA_000512545.1_Staphaur1.0	24652982	MUM475
Staphylococcus aureus subsp. aureus ST 1413	1424301	PRJNA229066	229066	Terrabacteria group	Firmicutes	2.77589	32.8	-	AYXU01	300	2869	2808	2/6/14	3/14/14	Contig	FDA	SAMN02404569	GCA_000564875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/564/875/GCA_000564875.1_MRSA_Clinical_Isolate_10S	24604656	10S
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	3.3397	39.2	-	CRRL01	1909	3062	2963	3/23/15	6/13/15	Scaffold	SC	SAMEA1024998	GCA_001194745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/194/745/GCA_001194745.1_6805_1_16	-	SMRU1024
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	7.28508	36.6	-	CRTN01	328	7143	7082	3/22/15	6/13/15	Scaffold	SC	SAMEA1025207	GCA_001195745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/195/745/GCA_001195745.1_6805_4_23	-	SMRU1679
Staphylococcus aureus MUF168	1435480	PRJNA231223	231223	Terrabacteria group	Firmicutes	2.75224	32.8	-	AZQR01	59	2764	2433	2/10/14	8/5/14	Contig	"School of Life Sciences, Manipal University"	SAMN02952960	GCA_000568135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/568/135/GCA_000568135.1_Staphaur1.0	24652982	MUF168
Staphylococcus aureus subsp. aureus AMRF1	1441466	PRJNA232549	232549	Terrabacteria group	Firmicutes	2.97659	32.7	-	AZTC01	112	-	-	2/18/14	3/24/14	Contig	Aravind Medical Research Foundation	SAMN02486168	GCA_000572225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/225/GCA_000572225.1_MRSA19983	24652976	AMRF1
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.74878	32.6	-	CRBR01	127	2710	2646	3/23/15	6/14/15	Scaffold	SC	SAMEA1024731	GCA_001196045.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/196/045/GCA_001196045.1_6731_1_13	-	type strain: N
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	5.87821	35.2	-	CRRH01	626	5804	5769	3/23/15	6/13/15	Scaffold	SC	SAMEA1024567	GCA_001198395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/198/395/GCA_001198395.1_6805_1_11	-	type strain: N
Staphylococcus aureus subsp. aureus AMRF2	1453986	PRJNA236405	236405	Terrabacteria group	Firmicutes	2.90903	32.8	-	JASM01	60	-	-	2/18/14	3/24/14	Contig	Aravind Medical Research Foundation	SAMN02596117	GCA_000572245.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/572/245/GCA_000572245.1_MRSA12966	-	AMRF2
Staphylococcus aureus subsp. anaerobius ST1464	1236482	PRJNA178987	178987	Terrabacteria group	Firmicutes	2.60445	32.7	-	ANIT01	100	-	-	3/11/14	8/5/14	Contig	urmite	SAMN02952938	GCA_000588835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/588/835/GCA_000588835.1_newbler	24501641	ST1464
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	4.40821	42.3	-	CRHY01	92	4294	4182	3/23/15	6/13/15	Scaffold	SC	SAMEA1025330	GCA_001199155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/155/GCA_001199155.1_6736_8_16	-	SMRU1312
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	5.24161	35.1	-	CRLP01	53	5291	5265	3/23/15	6/14/15	Scaffold	SC	SAMEA1025018	GCA_001199455.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/199/455/GCA_001199455.1_6755_1_21	-	type strain: N
Staphylococcus aureus subsp. aureus CO-85	904800	PRJNA53835	53835	Terrabacteria group	Firmicutes	2.87453	32.7	-	JHQG01	137	2870	2870	4/11/14	4/11/14	Contig	J. Craig Venter Institute	SAMN00138227	GCA_000626895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/626/895/GCA_000626895.1_gsaco85v01	-	CO-85
Staphylococcus aureus subsp. aureus	46170	PRJNA238408	238408	Terrabacteria group	Firmicutes	2.81995	32.9	-	JHBP01	440	-	-	4/23/14	4/23/14	Contig	Research Institute of childrens infections	SAMN02644478	GCA_000647755.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/647/755/GCA_000647755.1_Sau0520641	-	SA0520
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	7.17814	37.1	-	CRBZ01	3253	6282	6182	3/23/15	6/14/15	Scaffold	SC	SAMEA1025109	GCA_001203095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/095/GCA_001203095.1_6731_1_18	-	SMRU1002
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	5.96053	44.2	-	CQZO01	173	5836	5750	3/22/15	6/13/15	Scaffold	SC	SAMEA1024768	GCA_001203335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/203/335/GCA_001203335.1_6730_5_20	-	SMRU668
Staphylococcus aureus subsp. aureus CO-86	904801	PRJNA53837	53837	Terrabacteria group	Firmicutes	2.87048	32.7	-	JHTT01	110	2851	2851	6/3/14	6/3/14	Contig	J. Craig Venter Institute	SAMN00138220	GCA_000697745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/697/745/GCA_000697745.1_gsaco86v01	-	CO-86
Staphylococcus aureus subsp. aureus CO-98	904802	PRJNA53839	53839	Terrabacteria group	Firmicutes	2.51559	32.7	-	JHTU01	99	2560	2560	6/3/14	6/3/14	Contig	J. Craig Venter Institute	SAMN00138222	GCA_000697765.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/697/765/GCA_000697765.1_gsaco98v01	-	CO-98
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.75919	39.5	-	CRRT01	515	2733	2621	3/23/15	6/13/15	Scaffold	SC	SAMEA1024666	GCA_001205235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/235/GCA_001205235.1_6805_1_5	-	SMRU1013
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	4.2632	39.3	-	CRPE01	641	4525	4452	3/22/15	6/13/15	Scaffold	SC	SAMEA1025488	GCA_001205875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/875/GCA_001205875.1_6755_6_6	-	1
Staphylococcus aureus	1280	PRJNA247479	247479	Terrabacteria group	Firmicutes	2.91106	33	-	JPNA01	24	3195	3118	7/22/14	7/22/14	Contig	IGS	SAMN02689140	GCA_000732745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/732/745/GCA_000732745.1_sap149	-	Brady-SAP149
Staphylococcus aureus	1280	PRJNA272749	272749	Terrabacteria group	Firmicutes	2.85286	32.7	-	JXSA01	1240	-	-	2/3/15	2/3/15	Contig	Swansea University	SAMN03287934	GCA_000831795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/795/GCA_000831795.1_ASM83179v1	-	PB3-29
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	4.19048	39.6	-	CRFG01	273	4354	4303	3/22/15	6/13/15	Scaffold	SC	SAMEA1025535	GCA_001205955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/205/955/GCA_001205955.1_6736_4_16	-	SMRU1216
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	7.27846	36.6	-	CRVT01	582	7212	7168	3/23/15	6/13/15	Scaffold	SC	SAMEA1026214	GCA_001206515.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/206/515/GCA_001206515.1_6805_7_22	-	SMRU1751
Staphylococcus aureus	1280	PRJNA272749	272749	Terrabacteria group	Firmicutes	2.90948	32.7	-	JXSH01	1166	-	-	2/3/15	2/3/15	Contig	Swansea University	SAMN03287941	GCA_000831945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/831/945/GCA_000831945.1_ASM83194v1	-	RB5
Staphylococcus aureus LCT-SAG	1449972	PRJNA235248	235248	Terrabacteria group	Firmicutes	2.77558	32.8	-	JANN01	49	-	-	4/23/15	4/23/15	Contig	China CDC	SAMN02585132	GCA_000978715.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/978/715/GCA_000978715.1_ASM97871v1	25304992	LCT-SAG
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	7.04929	36.8	-	CRVI01	1500	6651	6575	3/23/15	6/13/15	Scaffold	SC	SAMEA1025552	GCA_001207275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/207/275/GCA_001207275.1_6805_6_6	-	SMRU1710
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	5.53088	37.9	-	CRRN01	3111	4962	4834	3/22/15	6/13/15	Scaffold	SC	SAMEA1024668	GCA_001211285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/285/GCA_001211285.1_6805_1_19	-	SMRU1027
Staphylococcus aureus LCT-SAS	1449974	PRJNA235251	235251	Terrabacteria group	Firmicutes	2.77396	32.7	-	JANP01	47	-	-	4/23/15	4/23/15	Contig	China CDC	SAMN02585134	GCA_000978745.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/978/745/GCA_000978745.1_ASM97874v1	25304992	LCT-SAS
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.81909	32.9	-	JXZS01	3	2909	2475	6/2/15	6/2/15	Contig	US Food and Drug Administration 	SAMN03255454	GCA_001018805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/018/805/GCA_001018805.1_ASM101880v1	-	NRS152
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.8861	39.8	-	CHOP01	2057	1733	1705	4/21/15	6/13/15	Scaffold	SC	SAMEA1888675	GCA_001336235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/235/GCA_001336235.1_6649_7_8	-	SMRU536
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.79297	39.5	-	CVKS01	2268	1559	1517	4/2/15	6/13/15	Scaffold	SC	SAMEA1888681	GCA_001336275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/275/GCA_001336275.1_6649_7_3	-	SMRU531
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.69123	32.8	-	JYAV01	3	2726	2404	6/2/15	6/2/15	Contig	US Food and Drug Administration 	SAMN03255483	GCA_001019555.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/019/555/GCA_001019555.1_ASM101955v1	-	052C
Staphylococcus aureus	1280	PRJNA267549	267549	Terrabacteria group	Firmicutes	3.68689	36.9	-	JWDY01	2737	-	-	7/10/15	7/13/16	Contig	University of Washington	SAMN03197036	GCA_001060255.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/060/255/GCA_001060255.1_ASM106025v1	26230489	1073_SAUR
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	2.15162	39.7	-	CIBW01	1618	1942	1901	4/21/15	6/14/15	Scaffold	SC	SAMEA1888687	GCA_001336295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/295/GCA_001336295.1_6649_7_19	-	SMRU547
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.99415	39.9	-	CGWE01	1801	1823	1811	4/21/15	6/13/15	Scaffold	SC	SAMEA1888691	GCA_001336315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/315/GCA_001336315.1_6649_7_21	-	SMRU549
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	2.99751	32.6	-	CSMT01	1599	2527	2513	3/23/15	6/13/15	Contig	SC	SAMEA1708840	GCA_001202295.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/202/295/GCA_001202295.1_9061_8_84	-	BSAR866
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	3.46766	32.5	-	CSPN01	3049	2808	2793	3/23/15	6/14/15	Contig	SC	SAMEA1708923	GCA_001208565.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/565/GCA_001208565.1_9061_8_91	-	BSAR873
Streptococcus pneumoniae	1313	PRJEB2357	203879	Terrabacteria group	Firmicutes	1.95447	40.3	-	CHNF01	1044	1778	1752	4/21/15	6/14/15	Scaffold	SC	SAMEA974701	GCA_001336855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/855/GCA_001336855.1_6259_6_20	-	19A
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	9.00042	36.3	-	CVLS01	6167	7816	7741	4/9/15	6/13/15	Scaffold	SC	SAMEA1024541	GCA_001336935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/336/935/GCA_001336935.1_6731_2_8	-	SMRU1016
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	3.07714	32.6	-	CSNC01	1312	2651	2633	3/23/15	6/13/15	Contig	SC	SAMEA1708830	GCA_001208785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/208/785/GCA_001208785.1_9061_8_81	-	BSAR863
Staphylococcus aureus subsp. aureus	46170	PRJNA292059	292059	Terrabacteria group	Firmicutes	2.70492	32.7	-	LHUS02	192	2719	2497	8/14/15	9/14/16	Contig	CSIR-CDRI	SAMN03963290	GCA_001267715.2	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/267/715/GCA_001267715.2_ASM126771v2	26404610	ATCC 29213
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.74718	39	-	CVLR01	1624	2509	2394	4/9/15	6/13/15	Scaffold	SC	SAMEA1024623	GCA_001337435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/435/GCA_001337435.1_6731_2_3	-	SMRU1011
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	5.36764	35.3	-	CGWL01	196	5389	5321	4/21/15	6/14/15	Scaffold	SC	SAMEA1024836	GCA_001338635.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/635/GCA_001338635.1_6680_7_8	-	type strain: N
Staphylococcus aureus subsp. aureus	46170	PRJNA290569	290569	Terrabacteria group	Firmicutes	2.54862	33.3	-	LITH01	628	-	-	8/31/15	8/31/15	Contig	FBUN FNC MPT URZN	SAMN03988206	GCA_001275805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/805/GCA_001275805.1_ASM127580v1	-	Alex455
Staphylococcus aureus	1280	PRJNA293402	293402	Terrabacteria group	Firmicutes	3.12923	32.9	-	LIZM01	514	3280	1459	9/4/15	9/11/15	Contig	Sardarkrushinagar Dantiwada Agricultural University	SAMN04002536	GCA_001278865.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/278/865/GCA_001278865.1_ASM127886v1	-	MRSA SKN07
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.95961	39.2	-	CFAX01	1689	2644	2538	3/15/15	6/12/15	Scaffold	SC	SAMEA1024861	GCA_001338775.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/775/GCA_001338775.1_6731_1_20	-	SMRU1004
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.95073	39.2	-	CHQU01	1408	2693	2600	4/21/15	6/13/15	Scaffold	SC	SAMEA1024898	GCA_001338955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/338/955/GCA_001338955.1_6731_1_23	-	SMRU1007
Staphylococcus aureus subsp. aureus	46170	PRJNA290569	290569	Terrabacteria group	Firmicutes	2.62416	33.1	-	LIFZ01	516	-	-	9/14/15	9/14/15	Contig	FBUN FNC MPT URZN	SAMN03892990	GCA_001282075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/282/075/GCA_001282075.1_ASM128207v1	-	Alex451
Staphylococcus aureus subsp. aureus JCM 2413	1236977	PRJDB676	243658	Terrabacteria group	Firmicutes	2.75562	32.7	-	BAZU01	56	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000464	GCA_001310915.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/310/915/GCA_001310915.1_ASM131091v1	-	JCM 2413
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.46618	39.5	-	CFEC01	290	2518	2377	3/15/15	6/13/15	Scaffold	SC	SAMEA1024912	GCA_001339055.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/055/GCA_001339055.1_6731_1_24	-	SMRU1008
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.53117	39.6	-	CFEB01	456	2472	2381	3/15/15	6/13/15	Scaffold	SC	SAMEA1024999	GCA_001339675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/675/GCA_001339675.1_6755_1_20	-	SMRU788
Staphylococcus aureus subsp. aureus JCM 2151	1295139	PRJDB840	243744	Terrabacteria group	Firmicutes	2.67731	32.7	-	BBDE01	47	-	-	10/1/15	10/1/15	Contig	The University of Tokyo	SAMD00000543	GCA_001312225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/312/225/GCA_001312225.1_ASM131222v1	-	JCM 2151
Staphylococcus aureus	1280	PRJNA284620	284620	Terrabacteria group	Firmicutes	2.27157	32.7276	plasmid pSA-CC175-1:CM003525.1; plasmid pSA_CC175-2:CM003526.1	LIGV01	30	2376	2239	10/23/15	10/23/15	Contig	Santa Clara University	SAMN03991630	GCA_001411695.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/695/GCA_001411695.1_ASM141169v1	-	CC175
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	6.25506	37.4	-	CFFY01	4247	5390	5307	3/15/15	6/13/15	Scaffold	SC	SAMEA1025057	GCA_001339895.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/895/GCA_001339895.1_6755_1_16	-	SMRU784
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	5.28011	35.2	-	CHRW01	274	5225	5198	4/21/15	6/13/15	Scaffold	SC	SAMEA1025064	GCA_001339955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/339/955/GCA_001339955.1_6731_1_16	-	25F
Staphylococcus aureus	1280	PRJNA284620	284620	Terrabacteria group	Firmicutes	1.98514	32.7631	plasmid pSA-CC445-1:CM003527.1	LIGW01	30	2071	1969	10/23/15	10/23/15	Contig	Santa Clara University	SAMN03992140	GCA_001411705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/411/705/GCA_001411705.1_ASM141170v1	-	CC445
Staphylococcus aureus	1280	PRJNA298488	298488	Terrabacteria group	Firmicutes	2.5095	32.7	-	LNOP01	287	-	-	12/17/15	3/2/16	Contig	Universidade Federal de Vicosa	SAMN04191396	GCA_001469065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/065/GCA_001469065.1_ASM146906v1	26893417	1364
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	2.81417	39.3	-	CFGZ01	1399	2527	2439	3/15/15	6/13/15	Scaffold	SC	SAMEA1025100	GCA_001340135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/135/GCA_001340135.1_6731_2_14	-	SMRU1022
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	1.79664	40.6	-	CFDG01	1139	1658	1623	3/15/15	6/13/15	Scaffold	SC	SAMEA1025115	GCA_001340235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/235/GCA_001340235.1_6830_3_24	-	SMRU1656
Staphylococcus aureus	1280	PRJNA298488	298488	Terrabacteria group	Firmicutes	2.57933	32.9	-	LNOR01	568	-	-	12/17/15	3/2/16	Contig	Universidade Federal de Vicosa	SAMN04191398	GCA_001469085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/085/GCA_001469085.1_ASM146908v1	26893417	302
Staphylococcus aureus	1280	PRJNA298488	298488	Terrabacteria group	Firmicutes	2.62275	32.8	-	LNOQ01	194	-	-	12/17/15	3/2/16	Contig	Universidade Federal de Vicosa	SAMN04191399	GCA_001469105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/469/105/GCA_001469105.1_ASM146910v1	26893417	170
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	1.85148	39.6	-	CHHT01	1362	1720	1700	4/21/15	6/13/15	Scaffold	SC	SAMEA1025183	GCA_001340655.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/655/GCA_001340655.1_6830_3_9	-	18C
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	0.799805	37.9	-	CFFU01	2072	630	624	3/15/15	6/13/15	Scaffold	SC	SAMEA1025213	GCA_001340835.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/835/GCA_001340835.1_6830_3_11	-	23F
Staphylococcus aureus	1280	PRJNA269675	269675	Terrabacteria group	Firmicutes	2.7536	32.7	-	LWRC01	80	2787	2544	4/29/16	4/29/16	Contig	SRCAMB	SAMN04599360	GCA_001639225.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/225/GCA_001639225.1_ASM163922v1	-	SCPM-O-B-7778
Staphylococcus aureus	1280	PRJNA321101	321101	Terrabacteria group	Firmicutes	2.82628	32.7	-	LXWR01	120	2870	2455	7/21/16	7/21/16	Contig	Christian Medical College	SAMN04966051	GCA_001691495.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/495/GCA_001691495.1_ASM169149v1	-	VBV9352
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	1.81401	39.5	-	CHHQ01	1832	1685	1675	4/21/15	6/14/15	Scaffold	SC	SAMEA1025231	GCA_001340935.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/935/GCA_001340935.1_6830_3_12	-	35F
Streptococcus pneumoniae	1313	PRJEB2395	204059	Terrabacteria group	Firmicutes	3.15632	39	-	CFFF01	1580	2897	2792	3/15/15	6/14/15	Scaffold	SC	SAMEA1025236	GCA_001340955.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/340/955/GCA_001340955.1_6710_8_8	-	SMRU1400
Staphylococcus aureus	1280	PRJNA321109	321109	Terrabacteria group	Firmicutes	2.87586	32.7	-	LXWS01	159	2942	2556	7/21/16	7/21/16	Contig	Christian Medical College	SAMN04966132	GCA_001691505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/691/505/GCA_001691505.1_ASM169150v1	-	VB12268
Staphylococcus aureus	1280	PRJNA348412	348412	Terrabacteria group	Firmicutes	2.81014	32.6	-	MLQK01	296	2780	2578	10/26/16	10/26/16	Contig	Christian Medical College	SAMN05908306	GCA_001854985.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/985/GCA_001854985.1_ASM185498v1	-	VB9939
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	6.53925	37.4	-	CHVB01	1845	6040	5979	4/21/15	6/14/15	Scaffold	SC	SAMEA1025852	GCA_001343615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/343/615/GCA_001343615.1_6823_1_1	-	19F
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	6.99721	36.8	-	CHVD01	1490	6617	6560	4/21/15	6/13/15	Scaffold	SC	SAMEA1025936	GCA_001344035.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/035/GCA_001344035.1_6871_1_23	-	SMRU1799
Staphylococcus aureus	1280	PRJNA348460	348460	Terrabacteria group	Firmicutes	2.83709	32.7	-	MLQE01	302	2836	2624	10/26/16	10/26/16	Contig	Christian Medical College	SAMN05908510	GCA_001855135.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/855/135/GCA_001855135.1_ASM185513v1	-	VB20017
Staphylococcus aureus	1280	PRJNA360134	360134	Terrabacteria group	Firmicutes	2.5259	32.7	-	MTJD01	51	-	-	2/13/17	2/13/17	Contig	Univ Mississippi Medical Center	SAMN06209069	GCA_001996705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/996/705/GCA_001996705.1_ASM199670v1	-	Transconjugant 24A
Streptococcus pneumoniae	1313	PRJEB2397	204078	Terrabacteria group	Firmicutes	2.65273	39.3	-	CFGX01	478	2611	2500	3/15/15	6/13/15	Scaffold	SC	SAMEA1026071	GCA_001344575.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/344/575/GCA_001344575.1_6823_1_10	-	SMRU1858
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	3.4247	38.8	-	CFEQ01	1663	3151	3052	3/15/15	6/14/15	Scaffold	SC	SAMEA1028629	GCA_001345395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/345/395/GCA_001345395.1_6972_2_3	-	SMRU2547
Staphylococcus aureus	1280	PRJNA380017	380017	Terrabacteria group	Firmicutes	2.81938	32.7	-	NBCP01	46	2946	2609	4/10/17	4/10/17	Contig	Teikyo University Institute of Medical Mycology	SAMN06625197	GCA_002082075.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/082/075/GCA_002082075.1_ASM208207v1	-	VRS3b
Staphylococcus aureus	1280	PRJNA384009	384009	Terrabacteria group	Firmicutes	2.43716	33.3	-	NIPL01	888	-	-	6/20/17	6/20/17	Contig	University of Bath	SAMN07201044	GCA_002201725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/201/725/GCA_002201725.1_ASM220172v1	-	SH1000
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	1.03117	39.5	-	CFDO01	10	1009	1004	3/15/15	6/13/15	Scaffold	SC	SAMEA1028908	GCA_001346275.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/275/GCA_001346275.1_6972_5_3	-	SMRU2619
Streptococcus pneumoniae	1313	PRJEB2479	204168	Terrabacteria group	Firmicutes	2.53629	39.5	-	CFGJ01	387	2633	2457	3/15/15	6/13/15	Scaffold	SC	SAMEA1028989	GCA_001346435.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/346/435/GCA_001346435.1_6925_8_8	-	SMRU2528
Staphylococcus aureus	1280	PRJNA231221	231221	Terrabacteria group	Firmicutes	2.99428	32.8	-	NJFS01	5	3172	2659	6/23/17	6/23/17	Contig	US Food and Drug Administration 	SAMN06173369	GCA_002206395.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/206/395/GCA_002206395.1_ASM220639v1	-	FDAARGOS_356
Staphylococcus aureus	1280	PRJEB2756	204420	Terrabacteria group	Firmicutes	2.10613	32.6	-	FIZF01	9	1957	1942	2/12/16	2/12/16	Contig	SC	SAMEA1464709	GCA_900045235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/045/235/GCA_900045235.1_7748_6_44	-	st2592
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	7.22782	36.8	-	CIIO01	2558	6687	6632	4/21/15	6/13/15	Scaffold	SC	SAMEA1973068	GCA_001348095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/095/GCA_001348095.1_9803_7_69	-	14
Streptococcus pneumoniae	1313	PRJEB2480	204179	Terrabacteria group	Firmicutes	5.75655	35.7	-	CIDK01	3090	5249	5208	4/21/15	6/14/15	Scaffold	SC	SAMEA2061937	GCA_001348315.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/348/315/GCA_001348315.1_9803_7_73	-	type strain: N
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	3.4104	32.7	-	FMQQ01	7974	2267	2263	9/30/16	9/30/16	Contig	SC	SAMEA1708664	GCA_900098185.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/185/GCA_900098185.1_9119_2_62	-	GKP138-25
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	3.37355	32.6	-	CSST01	1995	2803	2766	3/22/15	6/12/15	Scaffold	SC	SAMEA1708810	GCA_001211365.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/211/365/GCA_001211365.1_8987_2_58	-	BSAR706
Streptococcus pneumoniae	1313	PRJEB2393	204057	Terrabacteria group	Firmicutes	4.8109	38.4	-	CRCN01	4171	3990	3932	3/23/15	6/13/15	Scaffold	SC	SAMEA1024668	GCA_001404235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/404/235/GCA_001404235.1_6731_2_19	-	SMRU1027
Streptococcus pneumoniae	1313	PRJNA289243	289243	Terrabacteria group	Firmicutes	2.53672	39.7	-	LJWS01	968	2852	2308	3/7/16	3/7/16	Scaffold	National Institute for Communicable Diseases	SAMN03964654	GCA_001581855.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/581/855/GCA_001581855.1_ASM158185v1	-	NTPn 49
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	6.09585	40.2	-	CUDH01	32194	-	-	3/31/15	3/31/15	Scaffold	SC	SAMEA862567	GCA_001225285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/225/285/GCA_001225285.1_5364_5_9	-	DEU49
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	6.73343	43	-	CUCA01	24715	-	-	3/31/15	3/31/15	Scaffold	SC	SAMEA862661	GCA_001227165.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/227/165/GCA_001227165.1_5364_3_9	-	DEU36
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.46705	39.4	-	LWGX01	737	2834	2186	8/2/16	8/2/16	Scaffold	National Institute for Communicable Diseases	SAMN04337337	GCA_001697025.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/697/025/GCA_001697025.1_ASM169702v1	-	39287
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.30133	40.9	-	MDYE01	1200	2344	2107	9/6/16	9/6/16	Scaffold	National Institute for Communicable Diseases	SAMN04337295	GCA_001720095.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/720/095/GCA_001720095.1_ASM172009v1	-	515-19F
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	8.14307	45.4	-	CTZD01	2673	-	-	3/31/15	3/31/15	Scaffold	SC	SAMEA862662	GCA_001228205.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/228/205/GCA_001228205.1_5364_3_8	-	DEU35
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	8.89068	46.2	-	CTZB01	4090	-	-	3/31/15	3/31/15	Scaffold	SC	SAMEA862537	GCA_001230465.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/230/465/GCA_001230465.1_5364_3_3	-	DEU28
Streptococcus pneumoniae	1313	PRJNA317732	317732	Terrabacteria group	Firmicutes	2.07604	40.8	-	NOIM01	1388	2774	2587	8/22/17	8/22/17	Scaffold	National Institute for Communicable Diseases	SAMN04337304	GCA_002265125.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/265/125/GCA_002265125.1_ASM226512v1	-	8788-23F
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.14311	40	-	FFRE01	12	1154	1147	2/9/16	7/29/16	Scaffold	SC	SAMEA2203783	GCA_900033825.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/033/825/GCA_900033825.1_11657_4_4	-	2245STDY5608922
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	7.88183	44.8	-	CUAQ01	16994	-	-	3/31/15	3/31/15	Scaffold	SC	SAMEA862536	GCA_001231285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/285/GCA_001231285.1_5364_3_2	-	DEU27
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	8.70509	43.5	-	CUEP01	46475	-	-	3/31/15	3/31/15	Scaffold	SC	SAMEA862570	GCA_001231645.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/645/GCA_001231645.1_5364_5_6	-	DEU46
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.4323	38.8	-	FFTM01	801	2257	2212	2/10/16	2/10/16	Scaffold	SC	SAMEA2203852	GCA_900035615.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/035/615/GCA_900035615.1_11657_4_25	-	2245STDY5608992
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.26005	39.6	-	FFRG01	8	1250	1219	2/9/16	7/29/16	Scaffold	SC	SAMEA2203786	GCA_900036975.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/036/975/GCA_900036975.1_11679_1_9	-	2245STDY5608925
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	8.78404	45.5	-	CUAH01	5466	-	-	3/31/15	3/31/15	Scaffold	SC	SAMEA862566	GCA_001231665.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/231/665/GCA_001231665.1_5364_5_10	-	DEU50
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	5.51429	41.3	-	CUAN01	7587	-	-	3/31/15	3/31/15	Scaffold	SC	SAMEA862654	GCA_001232085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/232/085/GCA_001232085.1_5364_5_4	-	DEU43
Streptococcus pneumoniae	1313	PRJEB4909	240177	Terrabacteria group	Firmicutes	3.05483	38.5	-	FDNI01	1435	2591	2528	2/9/16	2/9/16	Scaffold	SC	SAMEA2382968	GCA_900043105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/043/105/GCA_900043105.1_12754_1_43	-	2842STDY5753512
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.59484	40	-	FFRF01	15	1601	1562	2/9/16	7/29/16	Scaffold	SC	SAMEA2203782	GCA_900044105.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/044/105/GCA_900044105.1_11893_8_12	-	2245STDY5608921
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	8.33653	45.7	-	CTZE01	1279	-	-	3/31/15	3/31/15	Scaffold	SC	SAMEA862664	GCA_001233385.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/385/GCA_001233385.1_5364_5_2	-	DEU41
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	7.70813	44.3	-	CUDK01	28707	-	-	3/31/15	3/31/15	Scaffold	SC	SAMEA862666	GCA_001233445.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/445/GCA_001233445.1_5364_3_12	-	DEU39
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	1.27932	39.4	-	FFRC01	10	1287	1260	2/9/16	7/29/16	Scaffold	SC	SAMEA2203780	GCA_900046805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/046/805/GCA_900046805.1_11511_8_7	-	2245STDY5608919
Streptococcus pneumoniae	1313	PRJEB2656	204315	Terrabacteria group	Firmicutes	2.59197	38.8	-	FIYI01	169	2636	2604	2/10/16	2/10/16	Scaffold	SC	SAMEA1033602	GCA_900050145.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/050/145/GCA_900050145.1_6938_4_11	-	D55377
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	9.34613	42.6	-	CUEG01	51920	-	-	3/31/15	3/31/15	Scaffold	SC	SAMEA862542	GCA_001233725.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/725/GCA_001233725.1_5364_2_11	-	DEU25
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	7.79345	44.7	-	CUAL01	12497	-	-	3/31/15	3/31/15	Scaffold	SC	SAMEA862531	GCA_001233785.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/233/785/GCA_001233785.1_5364_3_5	-	DEU30
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.51322	38.8	-	FHMI01	910	2330	2284	2/10/16	2/10/16	Scaffold	SC	SAMEA2467543	GCA_900052155.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/052/155/GCA_900052155.1_13154_3_1	-	2245STDY5804443
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.42989	39.1	-	FHMF01	802	2309	2246	2/10/16	2/10/16	Scaffold	SC	SAMEA2467535	GCA_900055335.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/055/335/GCA_900055335.1_13091_6_84	-	2245STDY5804435
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	8.33344	45.7	-	CTZH01	941	-	-	3/31/15	3/31/15	Scaffold	SC	SAMEA862655	GCA_001235505.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/235/505/GCA_001235505.1_5364_5_3	-	DEU42
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	7.53291	43.1	-	CUCB01	30970	-	-	3/31/15	3/31/15	Scaffold	SC	SAMEA862538	GCA_001237805.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/237/805/GCA_001237805.1_5364_3_4	-	DEU29
Streptococcus pneumoniae	1313	PRJEB3084	252777	Terrabacteria group	Firmicutes	2.45165	38.9	-	FHJF01	759	2326	2285	2/10/16	2/10/16	Scaffold	SC	SAMEA2335952	GCA_900060235.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/060/235/GCA_900060235.1_12291_4_20	-	2245STDY5699045
Streptococcus pneumoniae	1313	PRJEB10892	314859	Terrabacteria group	Firmicutes	1.92476	40.6	-	FWRL01	1962	-	-	4/5/17	4/5/17	Scaffold	UNIVERSITY OF MANCHESTER	SAMEA3545920	GCA_900171285.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/171/285/GCA_900171285.1_Hermans-616	-	-
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	8.32687	45.7	-	CTZA01	1224	-	-	3/31/15	3/31/15	Scaffold	SC	SAMEA862660	GCA_001238705.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/238/705/GCA_001238705.1_5364_3_10	-	DEU37
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	4.51236	38.8	-	CUBB01	13680	-	-	3/31/15	3/31/15	Scaffold	SC	SAMEA862573	GCA_001268065.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/065/GCA_001268065.1_5364_5_7	-	DEU47
Staphylococcus aureus	1280	PRJEB2173	204087	Terrabacteria group	Firmicutes	7.64926	43.8	-	CUDA01	28452	-	-	3/31/15	3/31/15	Scaffold	SC	SAMEA862667	GCA_001268085.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/268/085/GCA_001268085.1_5364_3_11	-	DEU38
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	4.03405	32.5	-	CFYS01	4022	3109	3081	3/15/15	6/13/15	Scaffold	SC	SAMEA1708848	GCA_001349875.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/349/875/GCA_001349875.1_8987_2_76	-	BSAR732
Staphylococcus aureus subsp. aureus 120	1221451	PRJNA309489	309489	Terrabacteria group	Firmicutes	2.55119	32.9	-	LRMZ01	174	-	-	5/4/16	5/4/16	Scaffold	University of Liege	SAMN04435207	GCA_001639795.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/639/795/GCA_001639795.1_DDA_SA_120	26931384	120
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.57141	33	-	NAIZ01	548	2829	2724	4/18/17	4/18/17	Scaffold	University of Sydney	SAMN06546673	GCA_002097345.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/345/GCA_002097345.1_ASM209734v1	-	N13/1/648
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.47458	33	-	NAJB01	471	2613	2512	4/18/17	4/18/17	Scaffold	University of Sydney	SAMN06546671	GCA_002097415.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/415/GCA_002097415.1_ASM209741v1	-	N13/1/382
Staphylococcus aureus	1280	PRJNA378450	378450	Terrabacteria group	Firmicutes	2.57112	33	-	NAJA01	511	2774	2672	4/18/17	4/18/17	Scaffold	University of Sydney	SAMN06546672	GCA_002097625.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/097/625/GCA_002097625.1_ASM209762v1	-	N13/1/396
Staphylococcus aureus	1280	PRJNA390248	390248	Terrabacteria group	Firmicutes	2.16383	31	-	NTCY01	13	2154	2027	9/11/17	9/11/17	Scaffold	San Diego State University	SAMN07224768	GCA_002288945.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/288/945/GCA_002288945.1_ASM228894v1	-	209
Staphylococcus aureus	1280	PRJEB2655	204314	Terrabacteria group	Firmicutes	3.16797	32.6	-	FMSD01	2038	2682	2672	9/30/16	9/30/16	Scaffold	SC	SAMEA1708781	GCA_900098675.1	-	ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/098/675/GCA_900098675.1_9119_2_30	-	GKP136-49